64251 chr1 979382 979382 1 + C T rs534519250 979382 + 979362 979402 41 AGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAG AGACACAGATCGAGGAGGCCTGGGCAGGGCCGTGCGAGCAG Direct Loss 1 0.655441756243614 1 0.757326602935791 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979382 chr1:979382 nonsynonymous SNV 0.761 0 21 hm5C_associated_SNPs_1 0 0 3 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 1469874 1469874 1 + C G rs138599210 1469874 + 1469854 1469894 41 GCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACCC GCGCCTGCCAGGGCCAGACCGAGGTGGGGCAGCCTGAACCC Direct Loss 1 0.918981166180613 1 0.950641751289368 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469874 chr1:1469874 . . 0 21 hm5C_associated_SNPs_2 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:1469841-1469889
64251 chr1 2240448 2240448 1 + C T rs577306431 2240448 + 2240428 2240468 41 CTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGGACGT CTGCAGCTGCCAGGCCCGTGTGGTCAGTGGGACCCGGACGT Direct Loss 1 0.467095427247587 1 0.457515567541122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240448 chr1:2240448 . . 0 21 hm5C_associated_SNPs_3 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 6160034 6160034 1 + C T rs113497487 6160034 + 6160014 6160054 41 CCCAGGCTTTGCAGACCACGCGGGGCAGGGCTCCACTGAAG CCCAGGCTTTGCAGACCACGTGGGGCAGGGCTCCACTGAAG Direct Loss 1 0.906091406718174 1 0.881210207939148 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCNAB2 ENSG00000069424 CDS Human protein_coding chr1:6160034 chr1:6160034 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_4 0 0 1 UPF1 POSTAR2 ENCODE chr1:6159967-6160034
64251 chr1 12009955 12009955 1 + C T rs7529452 12009955 + 12009935 12009975 41 GAGGATCTGGTCATTCTCTTCGCAGACAGGTAGGTGGGTCA GAGGATCTGGTCATTCTCTTTGCAGACAGGTAGGTGGGTCA Direct Loss 1 0.550409589449126 1 0.919054985046387 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009955 chr1:12009955 synonymous SNV . 0 21 hm5C_associated_SNPs_6 2 0 3 DDX24 POSTAR2 ENCODE chr1:12009877-12009966
64251 chr1 17053782 17053782 1 + C A rs2419168 17053782 + 17053762 17053802 41 GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGAA GGCCGTGGGTGTGTAGAGGCATTGGTGGTGCAGTGGTAGAA Direct Loss 1 0.557384999620761 1 0.168864339590073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053782 chr1:17053782 . . 0 21 hm5C_associated_SNPs_7 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053816 17053816 1 + C A rs2419165 17053816 + 17053796 17053836 41 GGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGGGTTCAAT Direct Loss 1 0.698132152205426 1 0.787520051002502 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053816 chr1:17053816 . . 0 21 hm5C_associated_SNPs_8 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17188446 17188446 1 + C A rs552484036 17188446 + 17188426 17188466 41 TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG TTCAGTGGTAGAATTCTCGCATCCCACGCGGGAGACCCGGG Direct Loss 1 0.097066849911404 1 0.8416987657547 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188446 chr1:17188446 . . 0 21 hm5C_associated_SNPs_10 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188454 + 17188434 17188474 41 TAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAATTC TAGAATTCTCGCCTCCCACGAGGGAGACCCGGGTTCAATTC Direct Loss 1 0.792368872740856 1 0.894923388957977 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188454 chr1:17188454 . . 0 21 hm5C_associated_SNPs_11 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 24121411 24121411 1 + C G rs565797797 24121411 + 24121391 24121431 41 CTGGCCTTAGCCACCTGGCTCTGTCTGCAGCAGGGGCAGGC CTGGCCTTAGCCACCTGGCTGTGTCTGCAGCAGGGGCAGGC Direct Loss 1 0.311619336291906 1 0.0796037316322327 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LYPLA2 ENSG00000011009 UTR3 Human protein_coding chr1:24121411 chr1:24121411 . . 0 21 hm5C_associated_SNPs_17 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:24121387-24121434
64251 chr1 26135615 26135615 1 + C T rs34177164 26135615 + 26135595 26135635 41 GCCTGCCTGACTGCCATCAGCGACTTCTACTACACTGTGAT GCCTGCCTGACTGCCATCAGTGACTTCTACTACACTGTGAT Direct Loss 1 0.248048278636271 1 0.0870510935783386 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26135615 chr1:26135615 synonymous SNV . 0 21 hm5C_associated_SNPs_18 1 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26135599-26135631
64251 chr1 28975140 28975140 1 + C G rs112431178 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGTGGCACAGGTAGGGCAACTCGATTGCTC Direct Loss 1 0.603070566801207 1 0.40318751335144 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975140 . . 0 21 hm5C_associated_SNPs_19 0 0 124 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975234 28975234 1 + C A rs181924966 28975234 + 28975214 28975254 41 GGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG GGCAGCTGGTGATCGTTGGTACCGGCGCCCTTTCTTTACTG Direct Loss 1 0.645594851030507 1 0.66478830575943 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975234 chr1:28975234 . . 0 21 hm5C_associated_SNPs_20 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975243 28975243 1 + C A rs188285085 28975243 + 28975223 28975263 41 TGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGTT TGATCGTTGGTCCCGGCGCCATTTCTTTACTGTTATATGTT Direct Loss 1 0.0371941925394319 1 0.0430854856967926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975243 chr1:28975243 . . 0 21 hm5C_associated_SNPs_21 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 38174379 38174379 1 + C T rs41303419 38174379 + 38174359 38174399 41 CCTGCCTGCAGTTGAGGGGGCGAAGAAGAACCCTGTGTTCT CCTGCCTGCAGTTGAGGGGGTGAAGAAGAACCCTGTGTTCT Direct Loss 1 0.683682006462401 1 0.463660448789597 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174379 chr1:38174379 . . 0 21 hm5C_associated_SNPs_22 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:38174373-38174407
64251 chr1 43296173 43296173 1 + C T rs33950227 43296173 + 43296153 43296193 41 TCTGGCTGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGT TCTGGCTGCCTCATCCCTCTTGTCTTCCTCCGGCTGTCTGT Direct Loss 1 0.30303601149061 1 0.0259088277816772 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ERMAP ENSG00000164010 CDS Human protein_coding chr1:43296173 chr1:43296173 synonymous SNV . 0 21 hm5C_associated_SNPs_24 0 0 2 BUD13 POSTAR2 ENCODE chr1:43296154-43296258
64251 chr1 45242241 45242241 1 + C A rs377221663 45242241 + 45242221 45242261 41 GCCACTTGCCAATGCAAGGACTTGTCATAGTTACACTGACT GCCACTTGCCAATGCAAGGAATTGTCATAGTTACACTGACT Direct Loss 1 0.147538973514822 1 0.103784769773483 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242241 chr1:45242241 . . 0 21 hm5C_associated_SNPs_26 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 55529491 55529491 1 + C T rs182138201 55529491 + 55529471 55529511 41 TGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT TGCCAGGAAGCTCCCTCCCTTACTGTGGGGCATTTCACCAT Direct Loss 1 0.509937678919024 1 0.0440004467964172 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCSK9 ENSG00000169174 UTR3 Human protein_coding chr1:55529491 chr1:55529491 . . 0 21 hm5C_associated_SNPs_27 2 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:55529480-55529520
64251 chr1 57178968 57178968 1 + C G rs556106154 57178968 + 57178948 57178988 41 GCTGGGTCTAGAAGAGTTATCAGACTGTAGGCCTGTATTAA GCTGGGTCTAGAAGAGTTATGAGACTGTAGGCCTGTATTAA Direct Loss 1 0.552833097823521 1 0.240870475769043 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 UTR3 Human protein_coding chr1:57178968 chr1:57178968 . . 0 21 hm5C_associated_SNPs_28 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:57178941-57178970
64251 chr1 62902820 62902820 1 + C A rs375113601 62902820 + 62902800 62902840 41 TGTTGCGCTCCTGGCTCTCCCGGGGCGGGCGCAGATGGGCG TGTTGCGCTCCTGGCTCTCCAGGGGCGGGCGCAGATGGGCG Direct Loss 1 0.902480262920933 1 0.908172845840454 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control USP1 ENSG00000162607 UTR5 Human protein_coding chr1:62902820 chr1:62902820 . . 0 21 hm5C_associated_SNPs_31 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:62902780-62902820
64251 chr1 86048579 86048579 1 + C A rs9658587 86048579 + 86048559 86048599 41 TGACCAGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGG TGACCAGGACTGTGAAGATGAGGTTCCGCTGCGAAGATGGG Direct Loss 1 0.247186196742019 1 0.0789790749549866 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048579 chr1:86048579 synonymous SNV 1.000 0 21 hm5C_associated_SNPs_32 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 93297617 93297617 1 + C G rs116168890 93297617 + 93297597 93297637 41 CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCT CCTTTTCCCACCCCCTAGCGGCGCTGGGCCTGCAGGTCTCT Direct Loss 1 0.360916099492776 1 0.0547218918800354 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297617 chr1:93297617 . . 0 21 hm5C_associated_SNPs_33 1 0 47 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:93297580-93297640
64251 chr1 109811554 109811554 1 + C T rs368143806 109811554 + 109811534 109811574 41 TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGG TTTGCTGGGGCCAAGCTGCCTCGCTACGAGGCCCTGCGTGG Direct Loss 1 0.146982064632592 1 0.416115701198578 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811554 chr1:109811554 synonymous SNV . 0 21 hm5C_associated_SNPs_37 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 111991768 111991768 1 - G A rs11548427 111991768 - 111991748 111991788 41 CGGAAGGAAACCCCACCCCCCCTAGTGCCCCCGGCGGCCCG CGGAAGGAAACCCCACCCCCTCTAGTGCCCCCGGCGGCCCG Direct Loss 1 0.244201268390215 1 0.169542759656906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR77 ENSG00000116455 CDS Human protein_coding chr1:111991768 chr1:111991768 synonymous SNV . 0 21 hm5C_associated_SNPs_38 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:111991760-111991780
64251 chr1 146731563 146731563 1 + C T rs200538213 146731563 + 146731543 146731583 41 AGCTCCCTGCTGCATAAGACCTTGTCAGAGGTAAACTTACA AGCTCCCTGCTGCATAAGACTTTGTCAGAGGTAAACTTACA Direct Loss 1 0.215487365883824 1 0.0200057625770569 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHD1L ENSG00000131778 CDS Human protein_coding chr1:146731563 chr1:146731563 synonymous SNV . 0 21 hm5C_associated_SNPs_39 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:146731522-146731564
64251 chr1 148248187 148248187 1 + C A rs587657101 148248187 + 148248167 148248207 41 GGTTCGAGCCCACCCAGGGACGCCTCTTTGAGCTTTTAAAG GGTTCGAGCCCACCCAGGGAAGCCTCTTTGAGCTTTTAAAG Direct Loss 1 0.313974626877927 1 0.0837754905223846 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248187 chr1:148248187 . . 0 21 hm5C_associated_SNPs_40 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:148248146-148248189
64251 chr1 151020378 151020378 1 + C T rs74856367 151020378 + 151020358 151020398 41 TGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAGGC TGCTGCTGAATCTGGGTCCCTGGGCGGCGGGGGCCCAAGGC Direct Loss 1 0.888263345029223 1 0.942277073860168 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020378 chr1:151020378 nonsynonymous SNV 0.667 1 21 hm5C_associated_SNPs_41 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 160183407 160183407 1 + C T rs1049198 160183407 + 160183387 160183427 41 GTCCTAACCCCCTTACTGTGCGCGTGTGTGTGCGTGTGCGC GTCCTAACCCCCTTACTGTGTGCGTGTGTGTGCGTGTGCGC Direct Loss 1 0.746990754151106 1 0.126310706138611 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEA15 ENSG00000162734 UTR3 Human protein_coding chr1:160183407 chr1:160183407 . . 0 21 hm5C_associated_SNPs_43 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:160183365-160183418
64251 chr1 161130542 161130542 1 + C T rs544093165 161130542 + 161130522 161130562 41 CCAGGGCCCGCAGCAAGGAGCGCAGAAACCCAGCCTCTGGG CCAGGGCCCGCAGCAAGGAGTGCAGAAACCCAGCCTCTGGG Direct Loss 1 0.582336994776516 1 0.521259427070618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130542 chr1:161130542 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_44 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130513-161130558
64251 chr1 161500937 161500937 1 + C T rs184807445 161500937 + 161500917 161500957 41 GTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTC GTGGTGAGCATAGCTGCCTTTCAAGCAGTTGACCCGGGTTC Direct Loss 1 0.302718473468988 1 0.75332772731781 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500937 chr1:161500937 . . 0 21 hm5C_associated_SNPs_45 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500971 161500971 1 + C A rs189592997 161500971 + 161500951 161500991 41 CGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTGTCTTTCC CGGGTTCGATTCCCGGCCAAAGCAAGGGTTTTTGTCTTTCC Direct Loss 1 0.63492687468349 1 0.440919607877731 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500971 chr1:161500971 . . 0 21 hm5C_associated_SNPs_46 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161748056 161748056 1 + C A rs2070151 161748056 + 161748036 161748076 41 TCTGCTCTCTTTGCTGAACTCGGTTATTTCACAGACACTGA TCTGCTCTCTTTGCTGAACTAGGTTATTTCACAGACACTGA Direct Loss 1 0.326899424123546 1 0.163087248802185 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161748056 chr1:161748056 synonymous SNV . 0 21 hm5C_associated_SNPs_47 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161748032-161748072
64251 chr1 180064828 180064828 1 + C T rs149481021 180064828 + 180064808 180064848 41 AAAAATAAGGCAGAAGAAACCATTGTACCTCTAATGGCAGA AAAAATAAGGCAGAAGAAACTATTGTACCTCTAATGGCAGA Direct Loss 1 0.0910562719418345 1 0.275153815746307 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180064828 chr1:180064828 synonymous SNV . 0 21 hm5C_associated_SNPs_48 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr1:180064801-180064832
64251 chr1 200811203 200811203 1 + C T rs188044529 200811203 + 200811183 200811223 41 TTGTACAGCCTCGTGTTGTTCGTCCACAAGGAGGTAATCAA TTGTACAGCCTCGTGTTGTTTGTCCACAAGGAGGTAATCAA Direct Loss 1 0.134450711366344 1 0.305178046226501 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200811203 chr1:200811203 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_49 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:200811183-200811211
64251 chr1 201966541 201966541 1 + C T rs79980228 201966541 + 201966521 201966561 41 CCTGCCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATC CCTGCCTGCTAGCTGGGGACTGCTCCTTGGCAGATGTCATC Direct Loss 1 0.211520923908531 1 0.0988190770149231 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966541 chr1:201966541 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_51 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201966505-201966553
64251 chr1 206906889 206906889 1 + C G rs562213709 206906889 + 206906869 206906909 41 GGGAGGCAGAGAGGAGTGACCGGGCACTGGCACTGCGATCA GGGAGGCAGAGAGGAGTGACGGGGCACTGGCACTGCGATCA Direct Loss 1 0.882852095883027 1 0.948578238487244 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAPKAPK2 ENSG00000162889 UTR3 Human protein_coding chr1:206906889 chr1:206906889 . . 0 21 hm5C_associated_SNPs_53 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:206906855-206906911
64251 chr1 212619354 212619354 1 + C A rs561236925 212619354 + 212619334 212619374 41 AAGGATGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT AAGGATGAGTTCTGATGTTCACCCTGCAGGAGCAGGTTCTT Direct Loss 1 0.332472777854007 1 0.10497972369194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NENF ENSG00000117691 UTR3 Human protein_coding chr1:212619354 chr1:212619354 . . 0 21 hm5C_associated_SNPs_54 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212619229-212619482
64251 chr1 215740806 215740806 1 + C T rs540761081 215740806 + 215740786 215740826 41 AGGCCGCGAAAGGTGGAGGCCGGGCCGCCCTTGTGCACCGC AGGCCGCGAAAGGTGGAGGCTGGGCCGCCCTTGTGCACCGC Direct Loss 1 0.831347351908589 1 0.681242227554321 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740806 chr1:215740806 . . 0 21 hm5C_associated_SNPs_55 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 222638418 222638418 1 + C T rs189143488 222638418 + 222638398 222638438 41 AGTTCGATCCTCGCTGGGGCCTCCTGTTGGCTTACTTTTAT AGTTCGATCCTCGCTGGGGCTTCCTGTTGGCTTACTTTTAT Direct Loss 1 0.290304159278274 1 0.141625821590424 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638418 chr1:222638418 . . 0 21 hm5C_associated_SNPs_56 0 0 56 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 228566484 228566484 1 + C T rs372336310 228566484 + 228566464 228566504 41 TACAAGAGGCACAACCTGGCCCAGGTGCGCTGAGGGTCGCC TACAAGAGGCACAACCTGGCTCAGGTGCGCTGAGGGTCGCC Direct Loss 1 0.115433718454974 1 0.643082737922668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228566484 chr1:228566484 synonymous SNV . 0 21 hm5C_associated_SNPs_58 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228566479-228566512
64251 chr1 249168105 249168105 1 + C A rs191209788 249168105 + 249168085 249168125 41 ACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCG ACTCAAGGTAAGCACCTTGCATGCGGGCTTTCTGGTCTCCG Direct Loss 1 0.788274699551869 1 0.344404816627502 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168105 chr1:249168105 . . 0 21 hm5C_associated_SNPs_59 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168490 249168490 1 + C G rs552356830 249168490 + 249168470 249168510 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCGATTCCCGG Direct Loss 1 0.347250417512447 1 0.691037952899933 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168490 chr1:249168490 . . 0 21 hm5C_associated_SNPs_60 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr2 20646860 20646860 1 + C G rs376654937 20646860 + 20646840 20646880 41 CCACCGCAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGC CCACCGCAGTCTGGTTGGAGGTGTTGTCTTGTATGCTCAGC Direct Loss 1 0.519911741779828 1 0.091275542974472 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOB ENSG00000143878 UTR5 Human protein_coding chr2:20646860 chr2:20646860 . . 0 21 hm5C_associated_SNPs_61 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:20646840-20646860
64251 chr2 27273696 27273696 1 + C G rs186601168 27273696 + 27273676 27273716 41 GAGGACTGTAGTGGATAGGGCGTGGCAATCCTTAGGTCGCT GAGGACTGTAGTGGATAGGGGGTGGCAATCCTTAGGTCGCT Direct Loss 1 0.444295777742716 1 0.605255246162415 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273696 chr2:27273696 . . 0 21 hm5C_associated_SNPs_63 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27274551 27274551 1 + C T rs562717893 27274551 + 27274531 27274571 41 CTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGTGTTT CTGGCAGAGCGGGGTCCCGGTACCGCGGCGCTCGGGTGTTT Direct Loss 1 0.66314673945795 1 0.161478191614151 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274551 chr2:27274551 . . 0 21 hm5C_associated_SNPs_64 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27274541-27274568
64251 chr2 54858664 54858664 1 + C T rs2229503 54858664 + 54858644 54858684 41 CTCCACAAGATGTGGGAGAACAGACAAAATCTCCTATCCCA CTCCACAAGATGTGGGAGAATAGACAAAATCTCCTATCCCA Direct Loss 1 0.288459089962923 1 0.43649023771286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858664 chr2:54858664 synonymous SNV . 0 21 hm5C_associated_SNPs_66 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:54858632-54858667
64251 chr2 64068312 64068312 1 + C T rs181097784 64068312 + 64068292 64068332 41 ACTTTCAGCCTGCGAGCCTTCTTCCCGGGGCGCCATAAACG ACTTTCAGCCTGCGAGCCTTTTTCCCGGGGCGCCATAAACG Direct Loss 1 0.275869008732281 1 0.0949519872665405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UGP2 ENSG00000169764 UTR5 Human protein_coding chr2:64068312 chr2:64068312 . . 0 21 hm5C_associated_SNPs_67 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:64068303-64068318
64251 chr2 74328796 74328796 1 + C G rs115005250 74328796 + 74328776 74328816 41 GCGGTGAAGGAGGAGAAGGGCGGTGGTGGTGCGGAGGAGGA GCGGTGAAGGAGGAGAAGGGGGGTGGTGGTGCGGAGGAGGA Direct Loss 1 0.501690556047659 1 0.528324127197266 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328796 chr2:74328796 synonymous SNV . 0 21 hm5C_associated_SNPs_68 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:74328790-74328812
64251 chr2 113286657 113286657 1 + C T rs73955229 113286657 + 113286637 113286677 41 CCTTCCCCTCTCCCCGGGAACGGCAGGGCACTGGGACCTCT CCTTCCCCTCTCCCCGGGAATGGCAGGGCACTGGGACCTCT Direct Loss 1 0.916370851165767 1 0.488657176494598 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTL ENSG00000114999 UTR3 Human protein_coding chr2:113286657 chr2:113286657 . . 0 21 hm5C_associated_SNPs_71 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:113286629-113286665
64251 chr2 122288513 122288513 1 + C G rs115435830 122288513 + 122288493 122288533 41 AGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC AGCGCATAGTGAGGGCAGTAGTGCTAACGCCTGAACAACAC Direct Loss 1 0.79341039259078 1 0.481564491987228 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288513 chr2:122288513 . . 0 21 hm5C_associated_SNPs_73 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 131906250 131906250 1 + C G rs16856546 131906250 + 131906230 131906270 41 CCACGGGTCTGCTTTTCTCTCTGATCCTAGGGGACTTGTTG CCACGGGTCTGCTTTTCTCTGTGATCCTAGGGGACTTGTTG Direct Loss 1 0.435268385837108 1 0.0619962513446808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906250 chr2:131906250 . . 0 21 hm5C_associated_SNPs_74 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 204103736 204103736 1 + C G rs375917906 204103736 + 204103716 204103756 41 AATTGGGCCAGGCTGAGGCGCTGCTGCTGGAGCGGCCGATC AATTGGGCCAGGCTGAGGCGGTGCTGCTGGAGCGGCCGATC Direct Loss 1 0.599636930504214 1 0.225895702838898 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYP20A1 ENSG00000119004 UTR5 Human protein_coding chr2:204103736 chr2:204103736 . . 0 21 hm5C_associated_SNPs_76 0 0 1 DDX3X POSTAR2 ENCODE chr2:204103717-204103800
64251 chr2 207026649 207026649 1 + C A rs370161702 207026649 + 207026629 207026669 41 CACCATCTTTCGGCTGAGTTCGTGATGGATTTGCTTTTTTC CACCATCTTTCGGCTGAGTTAGTGATGGATTTGCTTTTTTC Direct Loss 1 0.546474087210279 1 0.629470944404602 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD51 ENSG00000207047 ncRNA_exonic Human snoRNA chr2:207026649 chr2:207026649 . . 0 21 hm5C_associated_SNPs_77 0 0 57 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:207026581-207026674
64251 chr2 216190020 216190020 1 + C G rs2372536 216190020 + 216190000 216190040 41 AGTGGCTTCTCCAGGTGTAACTGTTGAGGAGGCTGTGGAGC AGTGGCTTCTCCAGGTGTAAGTGTTGAGGAGGCTGTGGAGC Direct Loss 1 0.384591612396512 1 0.296683967113495 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216190020 chr2:216190020 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_78 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:216190000-216190020
64251 chr2 234197569 234197569 1 + C A rs547884745 234197569 + 234197549 234197589 41 TATCTGTGGCTATGATCTGCCTTGTTCAAGCTGAGACCTCT TATCTGTGGCTATGATCTGCATTGTTCAAGCTGAGACCTCT Direct Loss 1 0.0805581490852143 1 0.0646186172962189 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA6 ENSG00000251791 ncRNA_exonic Human scaRNA chr2:234197569 chr2:234197569 . . 0 21 hm5C_associated_SNPs_80 0 0 28 FBL POSTAR2 GSE43666,GSM1067865 chr2:234197527-234197588
64251 chr2 238688317 238688317 1 + C T rs142787144 238688317 + 238688297 238688337 41 GCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG GCTTGGCGCTTAGGGGCTCCTGTGCCATGGCTCACCCCAGG Direct Loss 1 0.544144932945501 1 0.652991771697998 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688317 chr2:238688317 . . 0 21 hm5C_associated_SNPs_81 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 239359705 239359705 1 + C T rs113223463 239359705 + 239359685 239359725 41 ACCTCTCAGTGTGGAATGAACGCTCCAAACCCGAACCTCTC ACCTCTCAGTGTGGAATGAATGCTCCAAACCCGAACCTCTC Direct Loss 1 0.381969949228091 1 0.0859186947345734 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239359705 chr2:239359705 . . 0 21 hm5C_associated_SNPs_83 0 0 3 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr2:239359693-239359714
64251 chr3 5229643 5229643 1 + C T rs144177905 5229643 + 5229623 5229663 41 CGTCTGAGGAGCCCCGACGGCCCCGCGTCGCCCACCTCGGG CGTCTGAGGAGCCCCGACGGTCCCGCGTCGCCCACCTCGGG Direct Loss 1 0.619761386542444 1 0.262282490730286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229643 chr3:5229643 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_86 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229654 + 5229634 5229674 41 CCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGCC CCCCGACGGCCCCGCGTCGCACACCTCGGGGCCCGTGGGCC Direct Loss 1 0.402574608824375 1 0.0763785839080811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229654 chr3:5229654 nonsynonymous SNV 0.275 2 21 hm5C_associated_SNPs_87 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 10143189 10143189 1 + C T rs552573592 10143189 + 10143169 10143209 41 AAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACGA AAGCGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACGA Direct Loss 1 0.067837150540974 1 0.191718459129333 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FANCD2 ENSG00000144554 UTR3 Human protein_coding chr3:10143189 chr3:10143189 . . 0 21 hm5C_associated_SNPs_88 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10143133-10143208
64251 chr3 12574481 12574481 1 + C T rs187627297 12574481 + 12574461 12574501 41 CTCTGGCGTCAGTCTTTTCCCTCATCCACTCACTGGGGAGA CTCTGGCGTCAGTCTTTTCCTTCATCCACTCACTGGGGAGA Direct Loss 1 0.250928639056379 1 0.289283871650696 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TSEN2 ENSG00000154743 UTR3 Human protein_coding chr3:12574481 chr3:12574481 . . 0 21 hm5C_associated_SNPs_91 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:12574475-12574504
64251 chr3 14487265 14487265 1 + C T rs2228585 14487265 + 14487245 14487285 41 TTTATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTT TTTATTTTCCTGTTTGGGAGTGGCCTGCCTGTGTTTTTCTT Direct Loss 1 0.229866455497195 1 0.367685973644257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487265 chr3:14487265 synonymous SNV . 0 21 hm5C_associated_SNPs_92 0 0 7 BUD13 POSTAR2 ENCODE chr3:14487249-14487364
64251 chr3 40574890 40574890 1 + C G rs184243754 40574890 + 40574870 40574910 41 GATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTACAGG GATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTACAGG Direct Loss 1 0.379836474955875 1 0.431282222270966 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574890 chr3:40574890 . . 0 21 hm5C_associated_SNPs_93 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 45565503 45565503 1 + C T rs143838895 45565503 + 45565483 45565523 41 CCTTAGCAAGCCTCTCAGAGCGTCATTCTCCACAGCCCCGA CCTTAGCAAGCCTCTCAGAGTGTCATTCTCCACAGCCCCGA Direct Loss 1 0.551988631373439 1 0.0562140047550201 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45565503 chr3:45565503 synonymous SNV . 0 21 hm5C_associated_SNPs_95 1 0 1 U2AF2 POSTAR2 ENCODE chr3:45565472-45565543
64251 chr3 128998028 128998028 1 + C T rs563170047 128998028 + 128998008 128998048 41 CCGGGGAGCAGAGTCCGGAGCGGGATCCGCGGCCCACAGGT CCGGGGAGCAGAGTCCGGAGTGGGATCCGCGGCCCACAGGT Direct Loss 1 0.893472279199251 1 0.88223135471344 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HMCES ENSG00000183624 UTR5 Human protein_coding chr3:128998028 chr3:128998028 . . 0 21 hm5C_associated_SNPs_97 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:128998018-128998046
64251 chr3 169490055 169490055 1 + C G rs145973490 169490055 + 169490035 169490075 41 GTTATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGA GTTATCACGTTCGCCTAACAGGCGAAAGGTCCCCGGTTCGA Direct Loss 1 0.932677760424909 1 0.903801500797272 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490055 chr3:169490055 . . 0 21 hm5C_associated_SNPs_99 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490083 169490083 1 + C A rs139959878 169490083 + 169490063 169490103 41 GTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAAAATCC GTCCCCGGTTCGAAACCGGGAGGAAACACACTAAAAAATCC Direct Loss 1 0.382901476956474 1 0.681565403938293 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490083 chr3:169490083 . . 0 21 hm5C_associated_SNPs_100 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 179110165 179110165 1 + C G rs560382945 179110165 + 179110145 179110185 41 GATTCTGAAAAACTCTGCTTCCTGGCATCCAGGAGTTAGAG GATTCTGAAAAACTCTGCTTGCTGGCATCCAGGAGTTAGAG Direct Loss 1 0.234682473820136 1 0.0848840177059174 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFN1 ENSG00000171109 UTR3 Human protein_coding chr3:179110165 chr3:179110165 . . 0 21 hm5C_associated_SNPs_102 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:179110149-179110170
64251 chr3 183873345 183873345 1 + C G rs540238355 183873345 + 183873325 183873365 41 TGAGCCGCTGGGCCGCGCCGCGCGCCGCCGCCGTCTGGGAG TGAGCCGCTGGGCCGCGCCGGGCGCCGCCGCCGTCTGGGAG Direct Loss 1 0.676554213406099 1 0.524611234664917 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DVL3 ENSG00000161202 UTR5 Human protein_coding chr3:183873345 chr3:183873345 . . 0 21 hm5C_associated_SNPs_103 0 0 5 DDX3X POSTAR2 ENCODE chr3:183873292-183873403
64251 chr4 1809907 1809907 1 + C T rs185946582 1809907 + 1809887 1809927 41 GCATTTAGCTGGCCACATGGCGGAGAGTTTTAATTTTTAAC GCATTTAGCTGGCCACATGGTGGAGAGTTTTAATTTTTAAC Direct Loss 1 0.365997409349157 1 0.566654443740845 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FGFR3 ENSG00000068078 UTR3 Human protein_coding chr4:1809907 chr4:1809907 . . 0 21 hm5C_associated_SNPs_108 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:1809887-1809917
64251 chr4 4861569 4861569 1 + C G rs560169358 4861569 + 4861549 4861589 41 GGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGGCT GGCCGCGCTCCCAGCCCGCCGGGAGCCCATGCCCGGCGGCT Direct Loss 1 0.754911718374049 1 0.765377640724182 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861569 chr4:4861569 . . 0 21 hm5C_associated_SNPs_110 0 0 1 DDX3X POSTAR2 ENCODE chr4:4861474-4861613
64251 chr4 6644273 6644273 1 + C G rs12695 6644273 + 6644253 6644293 41 CTTGAGGGGCTTGGGGATGACAGTATGGAACTGTCTGCATT CTTGAGGGGCTTGGGGATGAGAGTATGGAACTGTCTGCATT Direct Loss 1 0.839859938762077 1 0.351244449615479 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRFAP1 ENSG00000179010 UTR3 Human protein_coding chr4:6644273 chr4:6644273 . . 0 21 hm5C_associated_SNPs_111 0 0 32 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:6644240-6644280
64251 chr4 38945980 38945980 1 + C T rs1809657 38945980 + 38945960 38946000 41 GGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCAT GGATTACAGGCTTGAGCCACTGCGCCCGGCCGGTCATTCAT Direct Loss 1 0.640711093185004 1 0.484590768814087 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945980 chr4:38945980 . . 0 21 hm5C_associated_SNPs_112 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 79440589 79440589 1 + C A rs149604281 79440589 + 79440569 79440609 41 GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCTT GCCTCCTTGGAGCACCACACAGAGATGGAGTTTTCTTTCTT Direct Loss 1 0.445569326324502 1 0.309185028076172 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440589 chr4:79440589 synonymous SNV . 0 21 hm5C_associated_SNPs_115 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 126398352 126398352 1 + C G rs150804471 126398352 + 126398332 126398372 41 AGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT AGAGTTACAGTTGGAGGTATGAGATCTCTAGAACCAATCCT Direct Loss 1 0.146974980776873 1 0.712036848068237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126398352 chr4:126398352 nonsynonymous SNV 0.628 1 21 hm5C_associated_SNPs_118 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126398325-126398361
64251 chr4 174243630 174243630 1 + C G rs73872561 174243630 + 174243610 174243650 41 TGGAAGTTGTGTAGCATTCACTCCCTTACCTACTGGCATTC TGGAAGTTGTGTAGCATTCAGTCCCTTACCTACTGGCATTC Direct Loss 1 0.628794057675275 1 0.19326114654541 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GALNT7 ENSG00000248774 ncRNA_exonic Human antisense chr4:174243630 chr4:174243630 . . 0 21 hm5C_associated_SNPs_119 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:174243620-174243640
64251 chr5 17275552 17275552 1 + C T rs3733748 17275552 + 17275532 17275572 41 GGAGGGCGAGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCC GGAGGGCGAGAAGGACGCGGTGGCTGCCAAGGAGGAGGCCC Direct Loss 1 0.800608426150902 1 0.496439635753632 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275552 chr5:17275552 nonsynonymous SNV 0.432 1 21 hm5C_associated_SNPs_121 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:17275534-17275555
64251 chr5 21501804 21501804 1 + C A rs112772214 21501804 + 21501784 21501824 41 TTTGCCTTGAATCCCAGGATCCACCTTGATGTTCAGTGAAG TTTGCCTTGAATCCCAGGATACACCTTGATGTTCAGTGAAG Direct Loss 1 0.0719166341851575 1 0.0204340815544128 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21501804 chr5:21501804 . . 0 21 hm5C_associated_SNPs_122 0 0 1 U2AF2 POSTAR2 ENCODE chr5:21501799-21501836
64251 chr5 65350481 65350481 1 + C T rs3805466 65350481 + 65350461 65350501 41 ATCATACAGAGAGTTCCACTCAGCGGGAAGAACTCCTCCAA ATCATACAGAGAGTTCCACTTAGCGGGAAGAACTCCTCCAA Direct Loss 1 0.851580897010827 1 0.910855710506439 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERBIN ENSG00000112851 CDS Human protein_coding chr5:65350481 chr5:65350481 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_124 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65350427-65350528
64251 chr5 148730879 148730879 1 + C T rs200331421 148730879 + 148730859 148730899 41 AACTGGATGTTCTCCCAGAGCGCAGTCACCTATGTTTCTTT AACTGGATGTTCTCCCAGAGTGCAGTCACCTATGTTTCTTT Direct Loss 1 0.597189329981257 1 0.117808848619461 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GRPEL2-AS1 ENSG00000253618 ncRNA_intronic Human antisense chr5:148730879 chr5:148730879 . . 0 21 hm5C_associated_SNPs_127 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:148730840-148730880
64251 chr5 149228230 149228230 1 + C T rs559958278 149228230 + 149228210 149228250 41 TTTGATCCTGAGTGGTCCTGCGGTTTGTCTGTGCCTGTGGA TTTGATCCTGAGTGGTCCTGTGGTTTGTCTGTGCCTGTGGA Direct Loss 1 0.101807736807486 1 0.289636969566345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPARGC1B ENSG00000155846 UTR3 Human protein_coding chr5:149228230 chr5:149228230 . . 0 21 hm5C_associated_SNPs_128 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149228205-149228284
64251 chr5 149754325 149754325 1 + C T rs114326915 149754325 + 149754305 149754345 41 GGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGAAT GGGGAAGCGGGAGGAGGACTTGCAGAGCAGCAGCGAGGAAT Direct Loss 1 0.700206838084404 1 0.354074597358704 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754325 chr5:149754325 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_129 1 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 159437621 159437621 1 + C G rs41275305 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TACTCAGGAAGCCGAGTGTGGTGGCCCTCCAGTTCCTGATC Direct Loss 1 0.745920972282089 1 0.115958124399185 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437621 nonsynonymous SNV 0.061 0 21 hm5C_associated_SNPs_130 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:159437615-159437639
64251 chr5 174955207 174955207 1 + C A rs560486726 174955207 + 174955187 174955227 41 CAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAA CAAGCGTGAGCCACCGCACCAGGCCTGAAAATATTTTCTAA Direct Loss 1 0.625239708442942 1 0.778511226177216 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955207 chr5:174955207 . . 0 21 hm5C_associated_SNPs_132 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 176085281 176085281 1 + C T rs115486549 176085281 + 176085261 176085301 41 AGCCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTT AGCCTGTGCCTGCCTACTAGTGCTCTGGGGTTCGGAGAGTT Direct Loss 1 0.221675614075728 1 0.0800319910049438 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085281 chr5:176085281 . . 0 21 hm5C_associated_SNPs_133 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:176085260-176085300
64251 chr5 177573228 177573228 1 + C A rs138696545 177573228 + 177573208 177573248 41 AGATCTGTGAGACCTTTACCCGGGACGCCTGTTCCCTGCTG AGATCTGTGAGACCTTTACCAGGGACGCCTGTTCCCTGCTG Direct Loss 1 0.975926869450004 1 0.970840156078339 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control RMND5B ENSG00000145916 CDS Human protein_coding chr5:177573228 chr5:177573228 synonymous SNV . 0 21 hm5C_associated_SNPs_134 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:177573212-177573235
64251 chr5 180614739 180614739 1 + C G rs150051789 180614739 + 180614719 180614759 41 TCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGT TCTAAGGCGCTGGATTAAGGGTCCAGTCTCTTCGGGGGCGT Direct Loss 1 0.818843358175147 1 0.80607533454895 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614739 chr5:180614739 . . 0 21 hm5C_associated_SNPs_135 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614748 180614748 1 + C G rs571621440 180614748 + 180614728 180614768 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAA CTGGATTAAGGCTCCAGTCTGTTCGGGGGCGTGGGTTCGAA Direct Loss 1 0.427929908654416 1 0.0884361863136292 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614748 chr5:180614748 . . 0 21 hm5C_associated_SNPs_136 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614770 180614770 1 + C T rs569033796 180614770 + 180614750 180614790 41 TCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGG TCGGGGGCGTGGGTTCGAATTCCACCGCTGCCAGTTTGTGG Direct Loss 1 0.131083101353364 1 0.207115411758423 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614770 chr5:180614770 . . 0 21 hm5C_associated_SNPs_137 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614775 180614775 1 + C A rs572539960 180614775 + 180614755 180614795 41 GGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGTAGTT GGCGTGGGTTCGAATCCCACAGCTGCCAGTTTGTGGTAGTT Direct Loss 1 0.152504608372702 1 0.383712232112885 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614775 chr5:180614775 . . 0 21 hm5C_associated_SNPs_138 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180633932 180633932 1 + C T rs138838874 180633932 + 180633912 180633952 41 GCCCCGGGTTCGATCCCCGGCATCTCCAGTGTAGTTTTGCA GCCCCGGGTTCGATCCCCGGTATCTCCAGTGTAGTTTTGCA Direct Loss 1 0.0536696191085413 1 0.08846715092659 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633932 chr5:180633932 . . 0 21 hm5C_associated_SNPs_139 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180634819 180634819 1 + C G rs181561952 180634819 + 180634799 180634839 41 GGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGT GGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCAACTGGTCGT Direct Loss 1 0.383206326915413 1 0.616956055164337 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634819 chr5:180634819 . . 0 21 hm5C_associated_SNPs_140 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr6 1313667 1313667 1 + C T rs557104756 1313667 + 1313647 1313687 41 CGCCGCCCCGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCCC CGCCGCCCCGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCCC Direct Loss 1 0.437721965320854 1 0.73321670293808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313667 chr6:1313667 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_141 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1611569 1611569 1 + C T rs79691946 1611569 + 1611549 1611589 41 CCGCGCCGCCGCCGCCCGCGCCCTCCGCCCCGCCGCCGCAC CCGCGCCGCCGCCGCCCGCGTCCTCCGCCCCGCCGCCGCAC Direct Loss 1 0.216249166913696 1 0.136122494935989 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611569 chr6:1611569 nonsynonymous SNV 0.012 1 21 hm5C_associated_SNPs_142 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 26328417 26328417 1 + C T rs6939540 26328417 + 26328397 26328437 41 GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC GACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGC Direct Loss 1 0.65033088231074 1 0.769384980201721 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328417 chr6:26328417 . . 0 21 hm5C_associated_SNPs_144 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328426 26328426 1 + C G rs146762816 26328426 + 26328406 26328446 41 TCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC TCAGAAGATTCCAGGTTCGAGTCCTGGCTGGCTCGTTCGAC Direct Loss 1 0.271996962992206 1 0.254013776779175 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328426 chr6:26328426 . . 0 21 hm5C_associated_SNPs_145 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26521484 26521484 1 + C A rs189360088 26521484 + 26521464 26521504 41 TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAA TGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTCGAA Direct Loss 1 0.310269346094116 1 0.203026443719864 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521484 chr6:26521484 . . 0 21 hm5C_associated_SNPs_146 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26538287 26538287 1 + C G rs190949316 26538287 + 26538267 26538307 41 ATAAGCCCTTAGTGGGTTTCCGTAGTGTAGTGGTTATCACG ATAAGCCCTTAGTGGGTTTCGGTAGTGTAGTGGTTATCACG Direct Loss 1 0.257210307910625 1 0.30268806219101 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538287 chr6:26538287 . . 0 21 hm5C_associated_SNPs_147 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26556784 26556784 1 + C T rs186106605 26556784 + 26556764 26556804 41 GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA GTTCGGGTGAGCCCGGCTAGTTCAGTCGGTAGAGCATGAGA Direct Loss 1 0.679008822209903 1 0.144256830215454 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556784 chr6:26556784 . . 0 21 hm5C_associated_SNPs_148 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556790 + 26556770 26556810 41 GTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GTGAGCCCGGCTAGCTCAGTAGGTAGAGCATGAGACTCTTA Direct Loss 1 0.7261506262982 1 0.395451903343201 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556790 chr6:26556790 . . 0 21 hm5C_associated_SNPs_149 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556835 26556835 1 + C T rs149649999 26556835 + 26556815 26556855 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTT CAGGGTCGTGGGTTCGAGCCTCACGTTGGGCGCTCTGGTTT Direct Loss 1 0.373321496233363 1 0.0802780985832214 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556835 chr6:26556835 . . 0 21 hm5C_associated_SNPs_150 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556845 + 26556825 26556865 41 GGTTCGAGCCCCACGTTGGGCGCTCTGGTTTTCAATCCTAA GGTTCGAGCCCCACGTTGGGAGCTCTGGTTTTCAATCCTAA Direct Loss 1 0.137217953046859 1 0.209825873374939 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556845 chr6:26556845 . . 0 21 hm5C_associated_SNPs_151 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26569127 26569127 1 + C T rs192209980 26569127 + 26569107 26569147 41 GAGCGGAGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTA GAGCGGAGGACTGTAGTTGGTTGTGTCCTTAGACATCCTTA Direct Loss 1 0.55469499993199 1 0.191197901964188 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569127 chr6:26569127 . . 0 21 hm5C_associated_SNPs_152 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569134 + 26569114 26569154 41 GGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCT GGACTGTAGTTGGCTGTGTCTTTAGACATCCTTAGGTCGCT Direct Loss 1 0.196196352181374 1 0.675622820854187 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569134 chr6:26569134 . . 0 21 hm5C_associated_SNPs_153 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26577344 26577344 1 + C T rs569721137 26577344 + 26577324 26577364 41 TTCCGTGTCCTTCGATAGCTCAGTTGGTAGAGCGGAGGACT TTCCGTGTCCTTCGATAGCTTAGTTGGTAGAGCGGAGGACT Direct Loss 1 0.2399000932935 1 0.134120404720306 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577344 chr6:26577344 . . 0 21 hm5C_associated_SNPs_154 0 0 46 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26577320-26577360
64251 chr6 26577370 26577370 1 + C T rs12663894 26577370 + 26577350 26577390 41 GTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTT GTAGAGCGGAGGACTGTAGGTTCATTAAGCAAGGTATCCTT Direct Loss 1 0.456058718852673 1 0.137813955545425 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577370 chr6:26577370 . . 0 21 hm5C_associated_SNPs_155 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26595117 26595117 1 + C A rs140030468 26595117 + 26595097 26595137 41 GACATCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTA GACATCCTTCGATAGCTCAGATGGTAGAGCGGAGGACTGTA Direct Loss 1 0.348460637665928 1 0.45306596159935 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595117 chr6:26595117 . . 0 21 hm5C_associated_SNPs_156 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26701713 26701713 1 + C T rs367740197 26701713 + 26701693 26701733 41 TGCCCGAGCTCAACAGCAAGCCCTCTTAGCGCAGCTGGCAG TGCCCGAGCTCAACAGCAAGTCCTCTTAGCGCAGCTGGCAG Direct Loss 1 0.0982932907653489 1 0.0688952207565308 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701713 chr6:26701713 . . 0 21 hm5C_associated_SNPs_157 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701772 26701772 1 + C T rs547971502 26701772 + 26701752 26701792 41 TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCT TGAAGGTCCTGAGTTCAAGCTTCAGAGAGGGCATCACTTCT Direct Loss 1 0.342566637486061 1 0.320448398590088 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701772 chr6:26701772 . . 0 21 hm5C_associated_SNPs_158 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 27059568 27059568 1 + C G rs370604102 27059568 + 27059548 27059588 41 CGCTTCGGGTGTGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTCGGGTGTGAGAGGTCGCGGGTTCAAATCCCGGACGA Direct Loss 1 0.747138709618382 1 0.818512797355652 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059568 chr6:27059568 . . 0 21 hm5C_associated_SNPs_159 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27065095 27065095 1 + C T rs185394001 27065095 + 27065075 27065115 41 GGGTTATCAAGACGAGGTGGCCGAGTGGTTAAGGCGATGGA GGGTTATCAAGACGAGGTGGTCGAGTGGTTAAGGCGATGGA Direct Loss 1 0.208928067722077 1 0.288814008235931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065095 chr6:27065095 . . 0 21 hm5C_associated_SNPs_160 0 0 13 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27101054 27101054 1 + C T rs55867104 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGTAACGCGGCCCGCGACAACAA Direct Loss 1 0.561581038812848 1 0.50826632976532 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101054 synonymous SNV . 0 21 hm5C_associated_SNPs_161 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27130075 27130075 1 + C T rs191548026 27130075 + 27130055 27130095 41 TGTGGCTTAGCTGGTCAAAGCGCCTGTCTAGTAAACAGGAG TGTGGCTTAGCTGGTCAAAGTGCCTGTCTAGTAAACAGGAG Direct Loss 1 0.608279490934833 1 0.14085191488266 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130075 chr6:27130075 . . 0 21 hm5C_associated_SNPs_162 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27203319 27203319 1 + C A rs9468016 27203319 + 27203299 27203339 41 GTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTTGCATAACACGCGAAAGGTCCCCG Direct Loss 1 0.14647232774942 1 0.10994428396225 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203319 chr6:27203319 . . 0 21 hm5C_associated_SNPs_163 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27203280-27203320
64251 chr6 27258410 27258410 1 + C T rs72839448 27258410 + 27258390 27258430 41 CAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCACA CAACGCAGCACACAGGTTTCTGTGGTGTAGTGGTTATCACA Direct Loss 1 0.424309733101125 1 0.176886141300201 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258410 chr6:27258410 . . 0 21 hm5C_associated_SNPs_164 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258429 + 27258409 27258449 41 CCGTGGTGTAGTGGTTATCACATTCGCCTTACACGCGAAAG CCGTGGTGTAGTGGTTATCATATTCGCCTTACACGCGAAAG Direct Loss 1 0.105062850281952 1 0.215852558612823 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258429 chr6:27258429 . . 0 21 hm5C_associated_SNPs_165 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27261700 27261700 1 + C G rs7746841 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTAGAGCGTGGTGCTACTAATGCCAGGGTCG Direct Loss 1 0.388153316278766 1 0.175464034080505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261700 . . 0 21 hm5C_associated_SNPs_166 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261713 27261713 1 + C T rs74715010 27261713 + 27261693 27261733 41 GAGCGTGCTGCTACTAATGCCAGGGTCGAGGTTTCGATCCC GAGCGTGCTGCTACTAATGCTAGGGTCGAGGTTTCGATCCC Direct Loss 1 0.834782826936607 1 0.763444781303406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261713 chr6:27261713 . . 0 21 hm5C_associated_SNPs_167 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27263252 27263252 1 + C T rs16897345 27263252 + 27263232 27263272 41 AGCACTCTGGACTCTGAATCCGGTAATCCGAGTTCAAATCT AGCACTCTGGACTCTGAATCTGGTAATCCGAGTTCAAATCT Direct Loss 1 0.646447622750346 1 0.630737483501434 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263252 chr6:27263252 . . 0 21 hm5C_associated_SNPs_168 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27265827 27265827 1 + C G rs62401095 27265827 + 27265807 27265847 41 TGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCA TGCTAATCCATTGTGCTCTGGACGCGTGGGTTCGAATCCCA Direct Loss 1 0.389559719906434 1 0.0621286928653717 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265827 chr6:27265827 . . 0 21 hm5C_associated_SNPs_169 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265855 27265855 1 + C T rs184865702 27265855 + 27265835 27265875 41 GGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTAAGAGGG GGTTCGAATCCCACCTTCGTTGACCGTTTTCTTTAAGAGGG Direct Loss 1 0.319796361732647 1 0.186115086078644 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265855 chr6:27265855 . . 0 21 hm5C_associated_SNPs_170 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27487367 27487367 1 + C A rs6923016 27487367 + 27487347 27487387 41 CCAGCGATCCGAGTTCAAATCTCGGTGGAACCTGTCGTTTC CCAGCGATCCGAGTTCAAATATCGGTGGAACCTGTCGTTTC Direct Loss 1 0.848289248227414 1 0.872362315654755 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487367 chr6:27487367 . . 0 21 hm5C_associated_SNPs_171 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487377 27487377 1 + C G rs74776839 27487377 + 27487357 27487397 41 GAGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTC GAGTTCAAATCTCGGTGGAAGCTGTCGTTTCTTCTTGCTTC Direct Loss 1 0.049784049746984 1 0.283483892679214 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487377 chr6:27487377 . . 0 21 hm5C_associated_SNPs_172 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487378 27487378 1 + C G rs185755837 27487378 + 27487358 27487398 41 AGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTCC AGTTCAAATCTCGGTGGAACGTGTCGTTTCTTCTTGCTTCC Direct Loss 1 0.2581114765921 1 0.269791841506958 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487378 chr6:27487378 . . 0 21 hm5C_associated_SNPs_173 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27586150 27586150 1 + C A rs61415880 27586150 + 27586130 27586170 41 ATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGT ATCGTGGCCCTGTAGCTCAGAGGTTGGAGCGCTGGTCTCGT Direct Loss 1 0.202137420305376 1 0.884038805961609 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586150 chr6:27586150 . . 0 21 hm5C_associated_SNPs_174 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586159 + 27586139 27586179 41 CTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGG CTGTAGCTCAGCGGTTGGAGTGCTGGTCTCGTAAACCTAGG Direct Loss 1 0.420946406790308 1 0.382793039083481 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586159 chr6:27586159 . . 0 21 hm5C_associated_SNPs_175 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27636387 27636387 1 + C T rs149096466 27636387 + 27636367 27636407 41 GTTAGCTCAGTCGGCTAGAGCGTGGTGCTAATAACGCCAAG GTTAGCTCAGTCGGCTAGAGTGTGGTGCTAATAACGCCAAG Direct Loss 1 0.759784670870594 1 0.768698930740356 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636387 chr6:27636387 . . 0 21 hm5C_associated_SNPs_176 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636410 + 27636390 27636430 41 GGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACG GGTGCTAATAACGCCAAGGTAGCGGGTTCGATCCCCGTACG Direct Loss 1 0.945097577385379 1 0.878627896308899 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636410 chr6:27636410 . . 0 21 hm5C_associated_SNPs_177 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27694498 27694498 1 + C A rs547002854 27694498 + 27694478 27694518 41 CGTGGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAG CGTGGCTTAGCTGGTTAAAGAGCCTGTCTAGTAAACAGGAG Direct Loss 1 0.58092286104525 1 0.196560680866241 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694498 chr6:27694498 . . 0 21 hm5C_associated_SNPs_178 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27694466-27694505
64251 chr6 27745718 27745718 1 + C G rs537629280 27745718 + 27745698 27745738 41 TAACCCAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAG TAACCCAGAGGTCGATGGATGTAAACCATCCTCTGCTAAAG Direct Loss 1 0.476251484094935 1 0.407282173633575 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745718 chr6:27745718 . . 0 21 hm5C_associated_SNPs_179 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 28611269 28611269 1 + C A rs559361842 28611269 + 28611249 28611289 41 TGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATC TGCTTTGCATGTATGAGGTCACGGGTTCGATCCCCGGCATC Direct Loss 1 0.415199560228315 1 0.44368714094162 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611269 chr6:28611269 . . 0 21 hm5C_associated_SNPs_180 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611240-28611280
64251 chr6 28678406 28678406 1 + C G rs369829956 28678406 + 28678386 28678426 41 GAGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTCAATCCC GAGCGCGTGCTTAGCATGCAGGAGGCCCTGGGTTCAATCCC Direct Loss 1 0.714539975078424 1 0.634377360343933 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678406 chr6:28678406 . . 0 21 hm5C_associated_SNPs_181 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28693800 28693800 1 + C T rs145472571 28693800 + 28693780 28693820 41 AAAACAGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGC AAAACAGTCTCCGTGGGCTCTGTAGCTTAGTTGGTTAAAGC Direct Loss 1 0.12206749049731 1 0.086550384759903 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693800 chr6:28693800 . . 0 21 hm5C_associated_SNPs_182 0 0 39 SSB POSTAR2 GSE95683,GSM2521599 chr6:28693780-28693800
64251 chr6 28693827 28693827 1 + C A rs572623484 28693827 + 28693807 28693847 41 TAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG TAGTTGGTTAAAGCGCCTGTATAGTAAACAGGAGATCCTGG Direct Loss 1 0.349454381234727 1 0.0778926610946655 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693827 chr6:28693827 . . 0 21 hm5C_associated_SNPs_183 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693844 + 28693824 28693864 41 TGTCTAGTAAACAGGAGATCCTGGGTTCGACTCCCAGCGGG TGTCTAGTAAACAGGAGATCTTGGGTTCGACTCCCAGCGGG Direct Loss 1 0.884284765005076 1 0.511765539646149 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693844 chr6:28693844 . . 0 21 hm5C_associated_SNPs_184 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28715523 28715523 1 + C G rs369041602 28715523 + 28715503 28715543 41 GGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAGA GGGTTGCGTCTACCCAGGGCGTGGATAGCTCAGTTGGTAGA Direct Loss 1 0.642002577758536 1 0.628186166286469 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715523 chr6:28715523 . . 0 21 hm5C_associated_SNPs_185 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715545 28715545 1 + C A rs7764775 28715545 + 28715525 28715565 41 GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACG GGATAGCTCAGTTGGTAGAAAATCAGACTTTTAATCTGACG Direct Loss 1 0.422033517871553 1 0.0850919485092163 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715545 chr6:28715545 . . 0 21 hm5C_associated_SNPs_186 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTTGGTAGAACATAAGACTTTTAATCTGACGGTG Direct Loss 1 0.442327962642439 1 0.270474374294281 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715548 . . 0 21 hm5C_associated_SNPs_187 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715564 28715564 1 + C A rs6929372 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATCAGACTTTTAATCTGAAGGTGCAGGGTTCAAGTCCCT Direct Loss 1 0.33878001911007 1 0.220220297574997 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715564 . . 0 21 hm5C_associated_SNPs_188 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28908873 28908873 1 + C A rs115765101 28908873 + 28908853 28908893 41 GGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCT GGCGCCAGACTCAAGCTTGGATTCCTCGTGTTGAGGATTCT Direct Loss 1 0.0721915272252275 1 0.0415367186069489 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908873 chr6:28908873 . . 0 21 hm5C_associated_SNPs_189 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908909 28908909 1 + C G rs58800808 28908909 + 28908889 28908929 41 ATTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTC ATTCTGGTCTCCAATGGAGGGGTGGGTTCGAATCCCACTTC Direct Loss 1 0.691965040525341 1 0.759884715080261 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908909 chr6:28908909 . . 0 21 hm5C_associated_SNPs_190 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28912399 28912399 1 + C T rs140736187 28912399 + 28912379 28912419 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGG CAGTCTCATAATCTGAAGGTTCTGAGTTCGAACCTCAGAGG Direct Loss 1 0.312230890991773 1 0.128762245178223 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912399 chr6:28912399 . . 0 21 hm5C_associated_SNPs_191 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28918809 28918809 1 + C A rs182035589 28918809 + 28918789 28918829 41 GAAGGCTTTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAG GAAGGCTTTTGCAGGGAGCCAGGATAGCTCAGTCGGTAGAG Direct Loss 1 0.407439843543473 1 0.606268763542175 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918809 chr6:28918809 . . 0 21 hm5C_associated_SNPs_192 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918830 + 28918810 28918850 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGTATCAGACTTTTAATCTGAGG Direct Loss 1 0.398382422484973 1 0.0586033463478088 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918830 chr6:28918830 . . 0 21 hm5C_associated_SNPs_193 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918854 28918854 1 + C A rs115194890 28918854 + 28918834 28918874 41 AGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG AGACTTTTAATCTGAGGGTCAAGGGTTCAAGTCCCTGTTCG Direct Loss 1 0.742867828925545 1 0.83625066280365 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918854 chr6:28918854 . . 0 21 hm5C_associated_SNPs_194 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28950013 28950013 1 + C A rs57071012 28950013 + 28949993 28950033 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCGAT Direct Loss 1 0.416854484567202 1 0.226513475179672 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950013 chr6:28950013 . . 0 21 hm5C_associated_SNPs_195 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950014 + 28949994 28950034 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCGATT Direct Loss 1 0.633022765440691 1 0.888863027095795 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950014 chr6:28950014 . . 0 21 hm5C_associated_SNPs_196 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950016 + 28949996 28950036 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCACCGACGCGGCCCGGGTTCGATTCC Direct Loss 1 0.434167438350945 1 0.752417266368866 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950016 chr6:28950016 . . 0 21 hm5C_associated_SNPs_197 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950035 28950035 1 + C A rs184275668 28950035 + 28950015 28950055 41 GCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTT GCCGCGGCCCGGGTTCGATTACCGGTCAGGGAATGAGGTTT Direct Loss 1 0.602794962427255 1 0.608574450016022 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950035 chr6:28950035 . . 0 21 hm5C_associated_SNPs_198 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 29910604 29910604 1 + C A rs12721675 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGGAGCCCCGCTTCATCGCAGTGGGCTACGTGGACGACAC Direct Loss 1 0.647153080453278 1 0.733878016471863 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910604 synonymous SNV . 0 21 hm5C_associated_SNPs_199 0 0 4 DDX3X POSTAR2 ENCODE chr6:29910550-29910605
64251 chr6 29913374 29913374 1 + C G rs1061815 29913374 + 29913354 29913394 41 AATGTGAGGAGGTGGGGAGACCACCCCACCCCCATGTCCAC AATGTGAGGAGGTGGGGAGAGCACCCCACCCCCATGTCCAC Direct Loss 1 0.385702789250358 1 0.516144335269928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913374 chr6:29913374 . . 0 21 hm5C_associated_SNPs_200 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:29913372-29913400
64251 chr6 30887972 30887972 1 + C T rs2285319 30887972 + 30887952 30887992 41 GAGGATGGGACCATGACCTCCCTCTGCGGGGACTGGCTGCA GAGGATGGGACCATGACCTCTCTCTGCGGGGACTGGCTGCA Direct Loss 1 0.121220371930809 1 0.352237701416016 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30887972 chr6:30887972 synonymous SNV . 0 21 hm5C_associated_SNPs_202 1 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:30887944-30887974
64251 chr6 31602074 31602074 1 + C G rs144034863 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCAGGCCGTCAGGCAGAGTCCAGAGATA Direct Loss 1 0.371394351726639 1 0.28546267747879 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602074 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_203 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31803074 31803074 1 + C T rs17201241 31803074 + 31803054 31803094 41 CAGGTAACTCTTGAGTGTGTCGCTGATGCCATCACCGCAGC CAGGTAACTCTTGAGTGTGTTGCTGATGCCATCACCGCAGC Direct Loss 1 0.49559611849308 1 0.160238564014435 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803074 chr6:31803074 . . 0 21 hm5C_associated_SNPs_204 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 33239873 33239873 1 + C G rs139139654 33239873 + 33239853 33239893 41 TCTCTTCCACAGGAGGCCTACACGCCGCCGCTTGTGCTGCA TCTCTTCCACAGGAGGCCTAGACGCCGCCGCTTGTGCTGCA Direct Loss 1 0.389429180609038 1 0.560738503932953 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS18 ENSG00000231500 UTR5 Human protein_coding chr6:33239873 chr6:33239873 . . 0 21 hm5C_associated_SNPs_205 0 0 28 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:33239840-33239880
64251 chr6 35047313 35047313 1 + C T rs138150663 35047313 + 35047293 35047333 41 GTGAAGGCTCTGGGTTATGACGGGAACAGCCCCCCTAGCGT GTGAAGGCTCTGGGTTATGATGGGAACAGCCCCCCTAGCGT Direct Loss 1 0.939466010666552 1 0.895805239677429 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ANKS1A ENSG00000064999 CDS Human protein_coding chr6:35047313 chr6:35047313 synonymous SNV . 0 21 hm5C_associated_SNPs_206 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr6:35047299-35047330
64251 chr6 37787623 37787623 1 + C T rs182727321 37787623 + 37787603 37787643 41 CCTTCCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGCCGC CCTTCCCCCTCCCCCCGCCCTGAGCCCCCCGACGCCGCCGC Direct Loss 1 0.785405952621877 1 0.694843828678131 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787623 chr6:37787623 . . 0 21 hm5C_associated_SNPs_207 0 0 2 SERBP1 POSTAR2 ENCODE chr6:37787617-37787721
64251 chr6 41755410 41755410 1 + C G rs9471653 41755410 + 41755390 41755430 41 ACGCCGATACGGTTCCTCCACCGAGGCCCATGCGAAGCTTT ACGCCGATACGGTTCCTCCAGCGAGGCCCATGCGAAGCTTT Direct Loss 1 0.368289623319464 1 0.575979292392731 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOMM6 ENSG00000214736;ENSG00000124593 UTR5;UTR3 Human other chr6:41755410 chr6:41755410 . . 0 21 hm5C_associated_SNPs_208 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:41755396-41755435
64251 chr6 42855945 42855945 1 + C G rs552431809 42855945 + 42855925 42855965 41 CCCTGTTGCCCAGGCTGGAGCGCAGTGGCATGATCTCAGCT CCCTGTTGCCCAGGCTGGAGGGCAGTGGCATGATCTCAGCT Direct Loss 1 0.415339533828515 1 0.472937881946564 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855945 chr6:42855945 . . 0 21 hm5C_associated_SNPs_209 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 43608407 43608407 1 + C T rs77559853 43608407 + 43608387 43608427 41 TCCTTCTGGTTGTCTGCCTCCCCTCAGATTTCCTGATAGGC TCCTTCTGGTTGTCTGCCTCTCCTCAGATTTCCTGATAGGC Direct Loss 1 0.0420067174987463 1 0.348141551017761 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAD2L1BP ENSG00000124688 UTR3 Human protein_coding chr6:43608407 chr6:43608407 . . 0 21 hm5C_associated_SNPs_210 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43608398-43608445
64251 chr6 44214838 44214838 1 + C G rs138561119 44214838 + 44214818 44214858 41 ACTTGGGGCACGCAGTAGCTCTCTCGAGTCACTCCGGCGCA ACTTGGGGCACGCAGTAGCTGTCTCGAGTCACTCCGGCGCA Direct Loss 1 0.330520728069283 1 0.13472905755043 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSP90AB1 ENSG00000096384 UTR5 Human protein_coding chr6:44214838 chr6:44214838 . . 0 21 hm5C_associated_SNPs_211 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:44214820-44214860
64251 chr6 56955006 56955006 1 + C A rs550274742 56955006 + 56954986 56955026 41 ATTCGTGGCGACGGCGGCGGCAGGGACAGCAGGAGCAGTGG ATTCGTGGCGACGGCGGCGGAAGGGACAGCAGGAGCAGTGG Direct Loss 1 0.864139091613629 1 0.822603106498718 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF451 ENSG00000112200 UTR5 Human protein_coding chr6:56955006 chr6:56955006 . . 0 21 hm5C_associated_SNPs_212 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:56954986-56955017
64251 chr6 88376924 88376924 1 + C A rs2307380 88376924 + 88376904 88376944 41 ATTTACATATATTAGAGGAGCCTGTTTTGTTGAGAAGATAA ATTTACATATATTAGAGGAGACTGTTTTGTTGAGAAGATAA Direct Loss 1 0.150434439495873 1 0.0721360743045807 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ORC3 ENSG00000135336 UTR3 Human protein_coding chr6:88376924 chr6:88376924 . . 0 21 hm5C_associated_SNPs_214 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:88376900-88376940
64251 chr6 90342271 90342271 1 - G A rs114545831 90342271 - 90342251 90342291 41 GGTGGCACACGCCTGTAGTCCCAAGCTACTTGCGAGGTTGA GGTGGCACACGCCTGTAGTCTCAAGCTACTTGCGAGGTTGA Direct Loss 1 0.187204404317816 1 0.394714802503586 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKRD6;LYRM2 ENSG00000083099;ENSG00000135299 UTR3 Human other chr6:90342271 chr6:90342271 . . 0 21 hm5C_associated_SNPs_215 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:90342266-90342294
64251 chr6 145503907 145503907 1 + C G rs117561287 145503907 + 145503887 145503927 41 GGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGGA GGGCTTTGAATCCAGCAATCGGAGTTCGAATCTTGGTGGGA Direct Loss 1 0.293240678241602 1 0.723720192909241 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503907 chr6:145503907 . . 0 21 hm5C_associated_SNPs_217 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:145503894-145503927
64251 chr6 151670287 151670287 1 + C T rs73780648 151670287 + 151670267 151670307 41 AAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAG AAGCCACGCAGAAATTTCTCTCCCAGCCGAATCTGGCCAAG Direct Loss 1 0.318274219769248 1 0.175737708806992 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670287 chr6:151670287 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_218 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:151670277-151670305
64251 chr6 158492660 158492660 1 + C T rs146694394 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG AGCCATCGACACAGTGAAGATGGGCATGGGGGGCAAGGCGG Direct Loss 1 0.717576810007461 1 0.684053301811218 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492660 nonsynonymous SNV 0.972 4 21 hm5C_associated_SNPs_219 0 0 5 BUD13 POSTAR2 ENCODE chr6:158492660-158492788
64251 chr7 819711 819711 1 + C T rs140641290 819711 + 819691 819731 41 TCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT TCCTACTATCAGAGCAGTGTTCAGTACCTGTACCGAGAGTT Direct Loss 1 0.151472654158313 1 0.353435873985291 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819711 chr7:819711 synonymous SNV . 0 21 hm5C_associated_SNPs_222 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:819697-819722
64251 chr7 1580589 1580589 1 + C T rs142847928 1580589 + 1580569 1580609 41 GTGATCCGCGTCTGCCTTAGCAGGGGCCTGCGTGAGTGGGC GTGATCCGCGTCTGCCTTAGTAGGGGCCTGCGTGAGTGGGC Direct Loss 1 0.902343689908048 1 0.942843437194824 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MAFK ENSG00000256005 ncRNA_exonic Human other chr7:1580589 chr7:1580589 . . 0 21 hm5C_associated_SNPs_223 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:1580571-1580598
64251 chr7 2394991 2394991 1 + C T rs11551167 2394991 + 2394971 2395011 41 GAACCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCCCTC GAACCCCGGGCGCTGGAGAATGGCGACGCGGACGAGCCCTC Direct Loss 1 0.913307232388523 1 0.856040596961975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394991 chr7:2394991 synonymous SNV . 0 21 hm5C_associated_SNPs_224 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2394972-2394992
64251 chr7 2395008 2395008 1 + C T rs545964398 2395008 + 2394988 2395028 41 GAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGG GAACGGCGACGCGGACGAGCTCTCCTTCAGCGACCCCGAGG Direct Loss 1 0.159293491773088 1 0.141182154417038 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395008 chr7:2395008 nonsynonymous SNV 0.946 1 21 hm5C_associated_SNPs_225 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 4306938 4306938 1 + C G rs151091785 4306938 + 4306918 4306958 41 CCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTC CCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTC Direct Loss 1 0.0202330226618535 1 0.117667585611343 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306938 chr7:4306938 . . 0 21 hm5C_associated_SNPs_227 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 5230037 5230037 1 + C T rs542906466 5230037 + 5230017 5230057 41 TCCCCGGCCGGGCCCACTCGCCGCGCGCCCAGCCATGAACC TCCCCGGCCGGGCCCACTCGTCGCGCGCCCAGCCATGAACC Direct Loss 1 0.636616824737751 1 0.655033230781555 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 UTR5 Human protein_coding chr7:5230037 chr7:5230037 . . 0 21 hm5C_associated_SNPs_228 0 0 2 DDX3X POSTAR2 ENCODE chr7:5229999-5230059
64251 chr7 5645521 5645521 1 + C T rs185458134 5645521 + 5645501 5645541 41 TCCCAGCCACCTCCTCCCAGCCCCCCAGGAGAGCTGGGCAC TCCCAGCCACCTCCTCCCAGTCCCCCAGGAGAGCTGGGCAC Direct Loss 1 0.0857696848866869 1 0.35432767868042 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645521 chr7:5645521 . . 0 21 hm5C_associated_SNPs_229 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:5645491-5645548
64251 chr7 30634661 30634661 1 + C A rs1049402 30634661 + 30634641 30634681 41 CCCTCAGCGCGGCCTCCTGCCCCCCGATCTCCTTGCCCGCC CCCTCAGCGCGGCCTCCTGCACCCCGATCTCCTTGCCCGCC Direct Loss 1 0.397790883281591 1 0.0171894133090973 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30634661 chr7:30634661 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_230 0 0 7 UPF1 POSTAR2 GSE69586,GSM1704214 chr7:30634650-30634671
64251 chr7 38217965 38217965 1 + C T rs546943699 38217965 + 38217945 38217985 41 CCCTCAGGCCGGGGCGCGACCGCGGATCCGCAGTTCCCGGG CCCTCAGGCCGGGGCGCGACTGCGGATCCGCAGTTCCCGGG Direct Loss 1 0.948001952225641 1 0.916872799396515 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STARD3NL ENSG00000010270 UTR5 Human protein_coding chr7:38217965 chr7:38217965 . . 0 21 hm5C_associated_SNPs_231 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:38217960-38217980
64251 chr7 40135523 40135523 1 + C T rs536324642 40135523 + 40135503 40135543 41 AAAGAAAGGGAGTAGAACTGCAATCAGTACATATTGTTTGA AAAGAAAGGGAGTAGAACTGTAATCAGTACATATTGTTTGA Direct Loss 1 0.127744189691469 1 0.24442583322525 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 UTR3 Human protein_coding chr7:40135523 chr7:40135523 . . 0 21 hm5C_associated_SNPs_232 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:40135512-40135542
64251 chr7 44084292 44084292 1 + C G rs4430012 44084292 + 44084272 44084312 41 GTCAAAGGGGCGGCCCGGCCCGGCCCGGAAGCTACAGCAGC GTCAAAGGGGCGGCCCGGCCGGGCCCGGAAGCTACAGCAGC Direct Loss 1 0.572247431389025 1 0.315709918737411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNL ENSG00000136279 UTR5 Human protein_coding chr7:44084292 chr7:44084292 . . 0 21 hm5C_associated_SNPs_233 0 0 1 DDX3X POSTAR2 ENCODE chr7:44084287-44084362
64251 chr7 56136260 56136260 1 + C A rs4245575 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CCAGACAGCAGAGATGGTGAAGGGCCTGTGCGGGAGGCGAC Direct Loss 1 0.609253473053035 1 0.727080047130585 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136260 nonsynonymous SNV 0.945 1 21 hm5C_associated_SNPs_234 0 0 4 LIN28A POSTAR2 GSE39873,GSM980594 chr7:56136249-56136270
64251 chr7 56147214 56147214 1 + C A rs143972395 56147214 + 56147194 56147234 41 GTCCTCTCTCCCCTTCTCTGCTGGCAGGATGGGCAACACTC GTCCTCTCTCCCCTTCTCTGATGGCAGGATGGGCAACACTC Direct Loss 1 0.208081214230244 1 0.245250314474106 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SUMF2 ENSG00000129103 UTR3 Human protein_coding chr7:56147214 chr7:56147214 . . 0 21 hm5C_associated_SNPs_235 0 0 1 U2AF2 POSTAR2 ENCODE chr7:56147202-56147251
64251 chr7 75933439 75933439 1 + C T rs528301561 75933439 + 75933419 75933459 41 GTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGC GTCACCTTCGAGTCGCGGGCTCAGCTTGGGGGCCCAGAAGC Direct Loss 1 0.304395535334542 1 0.37987893819809 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933439 chr7:75933439 synonymous SNV . 0 21 hm5C_associated_SNPs_238 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 77256319 77256319 1 + C T rs114128568 77256319 + 77256299 77256339 41 AGTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAA AGTTTTGAGATTAAGAAGGTTCCTCTCCAAGAGGGACCAAA Direct Loss 1 0.0354816856368176 1 0.0149650573730469 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256319 chr7:77256319 synonymous SNV . 0 21 hm5C_associated_SNPs_239 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 100303809 100303809 1 + C T rs78597009 100303809 + 100303789 100303829 41 AGCTGGCTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGG AGCTGGCTGGCTGCTTGCACTCACATCCTTCTTTCTCTGGG Direct Loss 1 0.369550276200988 1 0.0417510867118835 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POP7 ENSG00000172336 UTR5 Human protein_coding chr7:100303809 chr7:100303809 . . 0 21 hm5C_associated_SNPs_243 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:100303786-100303820
64251 chr7 100861475 100861475 1 + C T rs10215517 100861475 + 100861455 100861495 41 TTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACTT TTCCGACAGTTGTGTTGTGCTAATGGTGGAGAAGAAAACTT Direct Loss 1 0.444544754872885 1 0.273062229156494 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 UTR5 Human protein_coding chr7:100861475 chr7:100861475 . . 0 21 hm5C_associated_SNPs_244 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:100861448-100861476
64251 chr7 128423508 128423508 1 + C T rs533242301 128423508 + 128423488 128423528 41 AGAGATAACTACCAGTGGCTCGTTGGTCTAGGGGTATGATT AGAGATAACTACCAGTGGCTTGTTGGTCTAGGGGTATGATT Direct Loss 1 0.213652898653614 1 0.05588698387146 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423508 chr7:128423508 . . 0 21 hm5C_associated_SNPs_247 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128423476-128423519
64251 chr7 128423552 128423552 1 + C T rs147868566 128423552 + 128423532 128423572 41 GCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAG GCTTAGGGTGCGAGAGGTCCTGGGTTCAAATCCCGGACGAG Direct Loss 1 0.864914486313814 1 0.651093661785126 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423552 chr7:128423552 . . 0 21 hm5C_associated_SNPs_248 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr7:128423540-128423560
64251 chr7 139044963 139044963 1 + C A rs190082672 139044963 + 139044943 139044983 41 TCCCCCAGCCCAAAAGGGCCCGGTCTGCGCCCCACCCCCGC TCCCCCAGCCCAAAAGGGCCAGGTCTGCGCCCCACCCCCGC Direct Loss 1 0.443317416791789 1 0.252219080924988 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LUC7L2 ENSG00000146963 UTR5 Human protein_coding chr7:139044963 chr7:139044963 . . 0 21 hm5C_associated_SNPs_251 0 0 13 EIF3B POSTAR2 GSE65004,GSM1585667 chr7:139044908-139044982
64251 chr7 149007286 149007286 1 + C A rs112067002 149007286 + 149007266 149007306 41 AACATAATGGCAGCAGGGGGCATAGCTCAGTGGTAGAGCAT AACATAATGGCAGCAGGGGGAATAGCTCAGTGGTAGAGCAT Direct Loss 1 0.126412637746012 1 0.248968333005905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC155060;ZNF777 ENSG00000244560;ENSG00000231397 intergenic Human other chr7:149007286 chr7:149007286 . . 0 21 hm5C_associated_SNPs_255 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:149007280-149007300
64251 chr7 149404827 149404827 1 + C A rs73725557 149404827 + 149404807 149404847 41 CCTGGTTCAAATCCAGGTGCCCCCTGCTGTGTTCTTATTTT CCTGGTTCAAATCCAGGTGCACCCTGCTGTGTTCTTATTTT Direct Loss 1 0.0675042420380611 1 0.0553724467754364 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF767P;KRBA1 ENSG00000133624;ENSG00000133619 intergenic Human other chr7:149404827 chr7:149404827 . . 0 21 hm5C_associated_SNPs_256 0 0 14 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr7:149404780-149404840
64251 chr7 150028118 150028118 1 + C A rs140450745 150028118 + 150028098 150028138 41 AGAATGAGACCGTTGGAGCCCAGGATGACCCCCTGGCTTAC AGAATGAGACCGTTGGAGCCAAGGATGACCCCCTGGCTTAC Direct Loss 1 0.835708261076905 1 0.87314760684967 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150028118 chr7:150028118 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_257 0 0 6 LIN28B POSTAR2 ENCODE chr7:150028087-150028141
64251 chr7 156931872 156931872 1 + C A rs551763590 156931872 + 156931852 156931892 41 CCTCGCTGCCCCGGGCCGGGCGGGCGGGCGCCGAGAGCCTC CCTCGCTGCCCCGGGCCGGGAGGGCGGGCGCCGAGAGCCTC Direct Loss 1 0.932456916384891 1 0.773894190788269 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931872 chr7:156931872 . . 0 21 hm5C_associated_SNPs_258 0 0 7 DDX3X POSTAR2 ENCODE chr7:156931768-156931894
64251 chr8 26223857 26223857 1 + C T rs34109536 26223857 + 26223837 26223877 41 GAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGA GAATACCTCAGAAGTAAACTTTGTTCACTGTATGAAAATGA Direct Loss 1 0.0919210922397649 1 0.074847549200058 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223857 chr8:26223857 synonymous SNV . 0 21 hm5C_associated_SNPs_259 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 74893419 74893419 1 + C G rs61732273 74893419 + 74893399 74893439 41 GTTTCTCTTATTCTACGAGTCTGATTGGCCTTACATTTCTG GTTTCTCTTATTCTACGAGTGTGATTGGCCTTACATTTCTG Direct Loss 1 0.307973998155865 1 0.174936920404434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM70 ENSG00000175606 CDS Human protein_coding chr8:74893419 chr8:74893419 nonsynonymous SNV 0.313 0 21 hm5C_associated_SNPs_262 2 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:74893396-74893421
64251 chr8 145169204 145169204 1 + C T rs528202886 145169204 + 145169184 145169224 41 TACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTT TACCCGGAGGCGGGCACGATTGAGGGCCTGGCCTCGCTGTT Direct Loss 1 0.81344164385729 1 0.978274703025818 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145169204 chr8:145169204 synonymous SNV . 0 21 hm5C_associated_SNPs_267 0 0 5 PRPF8 POSTAR2 ENCODE chr8:145169078-145169228
64251 chr8 145736472 145736472 1 + C T rs144273718 145736472 + 145736452 145736492 41 GATGGGTTGGGGCCACATCCCTGCTTCTTGCTCCTGCTCAT GATGGGTTGGGGCCACATCCTTGCTTCTTGCTCCTGCTCAT Direct Loss 1 0.686668554166399 1 0.0384301841259003 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736472 chr8:145736472 synonymous SNV . 0 21 hm5C_associated_SNPs_268 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:145736460-145736480
64251 chr9 6413403 6413403 1 + C T rs548460330 6413403 + 6413383 6413423 41 CTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGCGCGGGC CTGCCGCTGAGGGCCCGAGCTGCAGGGAAAGCGGCGCGGGC Direct Loss 1 0.893530461689637 1 0.806639194488525 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413403 chr9:6413403 . . 0 21 hm5C_associated_SNPs_270 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr9 100773572 100773572 1 + C T rs553733827 100773572 + 100773552 100773592 41 GAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGGTGA GAAGGAGAAGATGAGGAAGATGAGGACGATGAGGATGGTGA Direct Loss 1 0.631569408956401 1 0.455347210168839 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773572 chr9:100773572 synonymous SNV . 0 21 hm5C_associated_SNPs_276 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 100773578 100773578 1 + C T rs35618988 100773578 + 100773558 100773598 41 GAAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGA GAAGATGAGGAAGACGAGGATGATGAGGATGGTGAAGAAGA Direct Loss 1 0.270119338575378 1 0.0932588577270508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773578 chr9:100773578 synonymous SNV . 0 21 hm5C_associated_SNPs_277 0 0 38 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 103002451 103002451 1 + C T rs2491097 103002451 + 103002431 103002471 41 CGTGGTTGATGTCTTGACCTCATATGAAAGCTGCAATATAA CGTGGTTGATGTCTTGACCTTATATGAAAGCTGCAATATAA Direct Loss 1 0.152696013678458 1 0.518760621547699 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control INVS ENSG00000119509 CDS Human protein_coding chr9:103002451 chr9:103002451 nonsynonymous SNV 0.982 3 21 hm5C_associated_SNPs_278 2 0 1 EIF3H POSTAR2 ENCODE chr9:103002362-103002462
64251 chr9 103189607 103189607 1 + C T rs563275299 103189607 + 103189587 103189627 41 CCCTGCTTGCGAGAGGAGCCCAGGCCGCCCGCCCTCGCGCC CCCTGCTTGCGAGAGGAGCCTAGGCCGCCCGCCCTCGCGCC Direct Loss 1 0.889145603435583 1 0.77401340007782 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSANTD3 ENSG00000066697 UTR5 Human protein_coding chr9:103189607 chr9:103189607 . . 0 21 hm5C_associated_SNPs_279 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:103189606-103189607
64251 chr9 131085127 131085127 1 + C A rs368877538 131085127 + 131085107 131085147 41 ACCCGCCCATCCTCCGCGGACGCCCGCTGCCATGGCGACTC ACCCGCCCATCCTCCGCGGAAGCCCGCTGCCATGGCGACTC Direct Loss 1 0.514829913261419 1 0.0375793874263763 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COQ4 ENSG00000167113 UTR5 Human protein_coding chr9:131085127 chr9:131085127 . . 0 21 hm5C_associated_SNPs_281 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr9:131085105-131085128
64251 chr9 131193480 131193480 1 + C G rs59813556 131193480 + 131193460 131193500 41 AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCCGGG AGCAGTGCCATCAGGAACCTGGGCGTAGACCTGCTCCCGGG Direct Loss 1 0.754377111765272 1 0.826961815357208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131193480 chr9:131193480 synonymous SNV . 0 21 hm5C_associated_SNPs_282 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131193474-131193513
64251 chr9 131769077 131769077 1 + C T rs371484037 131769077 + 131769057 131769097 41 ACCTCCTGTCACCCCCCTCCCGGAGTAGCCACGACTCCAGC ACCTCCTGTCACCCCCCTCCTGGAGTAGCCACGACTCCAGC Direct Loss 1 0.628731359929303 1 0.91421914100647 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NUP188 ENSG00000095319 UTR3 Human protein_coding chr9:131769077 chr9:131769077 . . 0 21 hm5C_associated_SNPs_283 0 0 1 IGF2BP1 POSTAR2 ENCODE chr9:131769053-131769112
64251 chr9 132265792 132265792 1 + C T rs146469064 132265792 + 132265772 132265812 41 TTCTGTAACTGGCTTCCTCTCGGCGGGCAGGCTCACACCCT TTCTGTAACTGGCTTCCTCTTGGCGGGCAGGCTCACACCCT Direct Loss 1 0.836866663901396 1 0.878222405910492 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132265792 chr9:132265792 . . 0 21 hm5C_associated_SNPs_284 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132265751-132265821
64251 chr9 132265871 132265871 1 + C T rs548617086 132265871 + 132265851 132265891 41 CCATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG CCATTCCTCATGCAGGCCATTGATGGAAATGTCAGACAGTG Direct Loss 1 0.321778046455924 1 0.147253721952438 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132265871 chr9:132265871 . . 0 21 hm5C_associated_SNPs_285 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132265832-132265892
64251 chr9 132898050 132898050 1 + C G rs12336580 132898050 + 132898030 132898070 41 CCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGTGATG CCCAGTGGTCTTCTTTCCAAGAGGAAAAGAAGGCTGTGATG Direct Loss 1 0.893639769304759 1 0.902981400489807 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132898050 chr9:132898050 . . 0 21 hm5C_associated_SNPs_286 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:132898034-132898066
64251 chr9 133577577 133577577 1 + C G rs34120870 133577577 + 133577557 133577597 41 CTGGTGAAACGGCAGAAGACCCACTTTCATGATTTGCCATG CTGGTGAAACGGCAGAAGACGCACTTTCATGATTTGCCATG Direct Loss 1 0.321157580542825 1 0.0747035145759583 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133577577 chr9:133577577 synonymous SNV . 0 21 hm5C_associated_SNPs_287 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:133577560-133577581
64251 chr9 135926282 135926282 1 + C T rs368903433 135926282 + 135926262 135926302 41 AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC AGGATGAGGAGGTGCCCAAGTAGCCACTGGAGGCTGCAGCC Direct Loss 1 0.670190705654338 1 0.547935605049133 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926282 chr9:135926282 stopgain 0.003 0 21 hm5C_associated_SNPs_288 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr9:135926269-135926290
64251 chr9 137024952 137024952 1 + C T rs536270237 137024952 + 137024932 137024972 41 TCAGTCTTGTTCTGGGGGGACGGCCCACTCCGGGGAGGGGG TCAGTCTTGTTCTGGGGGGATGGCCCACTCCGGGGAGGGGG Direct Loss 1 0.550428573824195 1 0.401546388864517 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137024952 chr9:137024952 . . 0 21 hm5C_associated_SNPs_292 0 0 5 DICER1 POSTAR2 GSE55333,GSM1334288 chr9:137024936-137024956
64251 chr9 140137636 140137636 1 + C T rs373363190 140137636 + 140137616 140137656 41 GTGTTCAGGGGCCGCATGTCCATGAAGGAGGTGGATGAGCA GTGTTCAGGGGCCGCATGTCTATGAAGGAGGTGGATGAGCA Direct Loss 1 0.82750207222146 1 0.586313962936401 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137636 chr9:140137636 synonymous SNV . 0 21 hm5C_associated_SNPs_293 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:140137600-140137640
64251 chr9 140151380 140151380 1 + C T rs182592368 140151380 + 140151360 140151400 41 CAAGACAACCAGGCCCTCTTCGGGGACGAGGTTTCCCCACT CAAGACAACCAGGCCCTCTTTGGGGACGAGGTTTCCCCACT Direct Loss 1 0.907821352219967 1 0.953577876091003 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140151380 chr9:140151380 synonymous SNV . 0 21 hm5C_associated_SNPs_294 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:140151347-140151381
64251 chr10 17275861 17275861 1 + C T rs4903 17275861 + 17275841 17275881 41 CTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG CTCACGGCTGCCCTGCGTGATGTACGTCAGCAATATGAAAG Direct Loss 1 0.117695486304056 1 0.041649341583252 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275861 chr10:17275861 synonymous SNV . 0 21 hm5C_associated_SNPs_295 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr10 75531699 75531699 1 + C T rs114029318 75531699 + 75531679 75531719 41 AGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGC AGCTGGAGCGCCGTTCTCTCTTGCTGGGACACCGCTTGGGC Direct Loss 1 0.763657935466955 1 0.505581974983215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC24C ENSG00000176986 UTR3 Human protein_coding chr10:75531699 chr10:75531699 . . 0 21 hm5C_associated_SNPs_297 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:75531672-75531726
64251 chr10 79800374 79800374 1 + C G rs114512325 79800374 + 79800354 79800394 41 TCTTTCTCTTGATTCACAGCCGAAGGAGTAAAGGTGCTGCA TCTTTCTCTTGATTCACAGCGGAAGGAGTAAAGGTGCTGCA Direct Loss 1 0.265344863312733 1 0.796180248260498 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 CDS Human protein_coding chr10:79800374 chr10:79800374 nonsynonymous SNV 0.023 1 21 hm5C_associated_SNPs_298 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:79800341-79800473
64251 chr10 81075062 81075062 1 + C T rs117137195 81075062 + 81075042 81075082 41 GAGGGAGGTGCAGAGGCATCCGGGGCGGGAGCAAGCCCCAG GAGGGAGGTGCAGAGGCATCTGGGGCGGGAGCAAGCCCCAG Direct Loss 1 0.884615598925219 1 0.91142463684082 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075062 chr10:81075062 . . 0 21 hm5C_associated_SNPs_299 0 0 1 FUS POSTAR2 SRX029328 chr10:81075042-81075068
64251 chr10 93751991 93751991 1 + C T rs151057472 93751991 + 93751971 93752011 41 ACAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTCA ACAAGTAGGCGAGGTCCTACTCCCAAAGCAGTAAAAGCTCA Direct Loss 1 0.71209472472694 1 0.732267498970032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751991 chr10:93751991 synonymous SNV . 0 21 hm5C_associated_SNPs_300 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:93751984-93752016
64251 chr10 95262980 95262980 1 + C T rs62642530 95262980 + 95262960 95263000 41 AAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGA AAGGCCAGATATAGTACTACTACATTGCTTGAACAGCTGGA Direct Loss 1 0.375475274570428 1 0.168567806482315 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262980 chr10:95262980 synonymous SNV . 0 21 hm5C_associated_SNPs_301 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 102124120 102124120 1 + C A rs541916361 102124120 + 102124100 102124140 41 CTATAAGGTGCCTCAGTTTTCCTTCTGTTAAAATGGGGATA CTATAAGGTGCCTCAGTTTTACTTCTGTTAAAATGGGGATA Direct Loss 1 0.0699213163832419 1 0.0924456417560577 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCD ENSG00000099194 UTR3 Human protein_coding chr10:102124120 chr10:102124120 . . 0 21 hm5C_associated_SNPs_303 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102123958-102124409
64251 chr10 104404285 104404285 1 + C A rs139837778 104404285 + 104404265 104404305 41 GGCCGGCTGGGGCCGGAGCTCGGGGCTCGGTGGGCCTACAG GGCCGGCTGGGGCCGGAGCTAGGGGCTCGGTGGGCCTACAG Direct Loss 1 0.975992154283974 1 0.89211094379425 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control TRIM8 ENSG00000171206 UTR5 Human protein_coding chr10:104404285 chr10:104404285 . . 0 21 hm5C_associated_SNPs_304 0 0 3 DDX3X POSTAR2 ENCODE chr10:104404276-104404396
64251 chr10 108729824 108729824 1 + C T rs10884395 108729824 + 108729804 108729844 41 CGTCCGTTCTCGTCTGATCTCGGAAGCTAAGCACGGTCGGG CGTCCGTTCTCGTCTGATCTTGGAAGCTAAGCACGGTCGGG Direct Loss 1 0.796188959984376 1 0.767491340637207 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SORCS1 ENSG00000200626 ncRNA_exonic Human rRNA chr10:108729824 chr10:108729824 . . 0 21 hm5C_associated_SNPs_305 0 0 27 METTL14 POSTAR2 GSE46705,GSM1135009 chr10:108729800-108729840
64251 chr10 112631685 112631685 1 + C G rs116602666 112631685 + 112631665 112631705 41 ACAAACAGAGCGAGAAGGGCCAGAGACTCTCCGAGGCGGCG ACAAACAGAGCGAGAAGGGCGAGAGACTCTCCGAGGCGGCG Direct Loss 1 0.697761440828167 1 0.437680870294571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD4 ENSG00000203497 ncRNA_intronic Human antisense chr10:112631685 chr10:112631685 . . 0 21 hm5C_associated_SNPs_306 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:112631680-112631700
64251 chr11 289651 289651 1 + C T rs115270978 289651 + 289631 289671 41 CGAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCA CGAGCTCCTTTCCTGCGAGGTCCCGTCTAGGAGGGGCCTCA Direct Loss 1 0.0836571098745265 1 0.0550280511379242 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289651 chr11:289651 . . 0 21 hm5C_associated_SNPs_309 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289668 + 289648 289688 41 AGGCCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGCC AGGCCCCGTCTAGGAGGGGCGTCAGGAAAATCGGGGCTGCC Direct Loss 1 0.211175468563041 1 0.154579728841782 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289668 chr11:289668 . . 0 21 hm5C_associated_SNPs_310 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 823809 823809 1 + C A rs1135628 823809 + 823789 823829 41 GAGGATTACTCGCAGCTGCCCGGAGAAGATCACATCCTGGA GAGGATTACTCGCAGCTGCCAGGAGAAGATCACATCCTGGA Direct Loss 1 0.493658954781379 1 0.712612450122833 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA2 ENSG00000177666 CDS Human protein_coding chr11:823809 chr11:823809 synonymous SNV . 0 21 hm5C_associated_SNPs_311 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:823795-823846
64251 chr11 3846713 3846713 1 + C T rs371208237 3846713 + 3846693 3846733 41 TTCAGTCCTGCTTGGGAGGACGCAGCCCACTGCCCAGAAAC TTCAGTCCTGCTTGGGAGGATGCAGCCCACTGCCCAGAAAC Direct Loss 1 0.521651540599405 1 0.406083315610886 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PGAP2 ENSG00000148985 UTR3 Human protein_coding chr11:3846713 chr11:3846713 . . 0 21 hm5C_associated_SNPs_312 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:3846679-3846729
64251 chr11 8707082 8707082 1 + C T rs372448230 8707082 + 8707062 8707102 41 GATTCACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCA GATTCACTGGTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCA Direct Loss 1 0.636330136789944 1 0.826485395431519 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707082 chr11:8707082 . . 0 21 hm5C_associated_SNPs_313 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 9595768 9595768 1 + C T rs117347074 9595768 + 9595748 9595788 41 GAGGAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCGGA GAGGAGGACCTGTTGCTGCCTGGCGCCTGCCCGGGCGCGGA Direct Loss 1 0.895372009564043 1 0.713217377662659 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9595768 chr11:9595768 synonymous SNV . 0 21 hm5C_associated_SNPs_314 0 0 6 BUD13 POSTAR2 ENCODE chr11:9595742-9595799
64251 chr11 17393604 17393604 1 + C G rs557428928 17393604 + 17393584 17393624 41 CTCTCAAGTGCATTCTGAAACACTGGAACTCCTTTGACACT CTCTCAAGTGCATTCTGAAAGACTGGAACTCCTTTGACACT Direct Loss 1 0.314542037837314 1 0.151001363992691 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393604 chr11:17393604 nonsynonymous SNV 0.752 1 21 hm5C_associated_SNPs_316 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr11:17393559-17393633
64251 chr11 34969150 34969150 1 + C T rs34582941 34969150 + 34969130 34969170 41 GATGGAATCTTGGCCAAAATCGTGGTAAGTTTTTATTTTAA GATGGAATCTTGGCCAAAATTGTGGTAAGTTTTTATTTTAA Direct Loss 1 0.691472600926877 1 0.833375513553619 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969150 chr11:34969150 synonymous SNV . 0 21 hm5C_associated_SNPs_317 2 0 2 PRPF8 POSTAR2 ENCODE chr11:34969140-34969179
64251 chr11 35251376 35251376 1 + C G rs78006686 35251376 + 35251356 35251396 41 ACATCTTCAACAGACCCCCTCTAGAAATTTTTCAGATGCTT ACATCTTCAACAGACCCCCTGTAGAAATTTTTCAGATGCTT Direct Loss 1 0.539647822494763 1 0.165359854698181 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CD44 ENSG00000026508 UTR3 Human protein_coding chr11:35251376 chr11:35251376 . . 0 21 hm5C_associated_SNPs_318 0 0 6 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:35251360-35251400
64251 chr11 35828455 35828455 1 + C T rs182988466 35828455 + 35828435 35828475 41 ATTTGTGAAAATTGTGGTGCCATGAATTAAGATGGATGACT ATTTGTGAAAATTGTGGTGCTATGAATTAAGATGGATGACT Direct Loss 1 0.47425994206499 1 0.358970552682877 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM44 ENSG00000166326 UTR3 Human protein_coding chr11:35828455 chr11:35828455 . . 0 21 hm5C_associated_SNPs_319 0 0 10 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:35828422-35828460
64251 chr11 46695365 46695365 1 + C T rs114393370 46695365 + 46695345 46695385 41 TCTACTCCATTCCTCCTGGCCCACCTGGGGCATTCACTGGC TCTACTCCATTCCTCCTGGCTCACCTGGGGCATTCACTGGC Direct Loss 1 0.0880252645041803 1 0.10117381811142 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATG13 ENSG00000175224 UTR3 Human protein_coding chr11:46695365 chr11:46695365 . . 0 21 hm5C_associated_SNPs_320 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:46695344-46695367
64251 chr11 47587171 47587171 1 + C G rs576084961 47587171 + 47587151 47587191 41 GGGTCGCCGCTGCGCCGGGCCGGGATGGCGGCCACCGCGCT GGGTCGCCGCTGCGCCGGGCGGGGATGGCGGCCACCGCGCT Direct Loss 1 0.950445724268232 1 0.886565327644348 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPMT1 ENSG00000110536 UTR5 Human protein_coding chr11:47587171 chr11:47587171 . . 0 21 hm5C_associated_SNPs_321 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr11:47587148-47587173
64251 chr11 59323950 59323950 1 + C G rs7924849 59323950 + 59323930 59323970 41 AGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCG AGACTTTTAATCTGAGGGTCGGGGGTTCAAGTCCCTGTTCG Direct Loss 1 0.775758652818611 1 0.906670033931732 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323950 chr11:59323950 . . 0 21 hm5C_associated_SNPs_322 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 60699530 60699530 1 + C A rs180839936 60699530 + 60699510 60699550 41 GTGCGCCTTGTCACTGTGGACGGCGGGGGGGCCTTGGTGGA GTGCGCCTTGTCACTGTGGAAGGCGGGGGGGCCTTGGTGGA Direct Loss 1 0.838872444773949 1 0.783991158008575 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60699530 chr11:60699530 nonsynonymous SNV 0.089 0 21 hm5C_associated_SNPs_323 0 0 2 BUD13 POSTAR2 ENCODE chr11:60699522-60699571
64251 chr11 61111346 61111346 1 + C G rs35723406 61111346 + 61111326 61111366 41 AGATGCTGAAACCACTGCAGCAGCCTGGCCTAACGTGGCTG AGATGCTGAAACCACTGCAGGAGCCTGGCCTAACGTGGCTG Direct Loss 1 0.240073137974426 1 0.38386395573616 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61111346 chr11:61111346 nonsynonymous SNV 0.688 1 21 hm5C_associated_SNPs_324 0 0 5 BUD13 POSTAR2 ENCODE chr11:61111306-61111355
64251 chr11 63971624 63971624 1 + C G rs201396024 63971624 + 63971604 63971644 41 TGTTCATCCCCCCTTCCCTTCGCCCTCATGTGGAAAGAGGA TGTTCATCCCCCCTTCCCTTGGCCCTCATGTGGAAAGAGGA Direct Loss 1 0.375113480991846 1 0.618635535240173 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STIP1 ENSG00000168439 UTR3 Human protein_coding chr11:63971624 chr11:63971624 . . 0 21 hm5C_associated_SNPs_326 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:63971514-63971626
64251 chr11 65190887 65190887 1 + C A rs79376422 65190887 + 65190867 65190907 41 CGCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGT CGCTCGGCCTGGGACGGGGCACAGGCCGGGCCCAGCCTGGT Direct Loss 1 0.30013815866273 1 0.403544574975967 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190887 chr11:65190887 . . 0 21 hm5C_associated_SNPs_329 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65198182 65198182 1 + C A rs78025628 65198182 + 65198162 65198202 41 ATTTAGTGTACACATGTATCCCCTGGAGTGGCATTGCCTCG ATTTAGTGTACACATGTATCACCTGGAGTGGCATTGCCTCG Direct Loss 1 0.0877557111415381 1 0.0632512867450714 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65198182 chr11:65198182 . . 0 21 hm5C_associated_SNPs_330 0 0 28 U2AF2 POSTAR2 GSE61603,GSM1509288 chr11:65196240-65199420
64251 chr11 65267331 65267331 1 + C A rs187923588 65267331 + 65267311 65267351 41 AGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATAT AGAAAATTGGAAGATAGAAAAAAGATAGAAAATGAAAATAT Direct Loss 1 0.633248355988182 1 0.582039833068848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267331 chr11:65267331 . . 0 21 hm5C_associated_SNPs_331 0 0 66 HNRNPU POSTAR2 GSE34491,GSM850170 chr11:65266520-65267400
64251 chr11 65658714 65658714 1 + C G rs148802656 65658714 + 65658694 65658734 41 AATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCA AATGGGGCCCCCGCGGCGGCGCCAGCGGCGCCGGGGGATCA Direct Loss 1 0.329969250522174 1 0.598831534385681 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658714 chr11:65658714 nonsynonymous SNV 0.640 0 21 hm5C_associated_SNPs_333 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 74329609 74329609 1 + C A rs148419916 74329609 + 74329589 74329629 41 GCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTGA GCTATACAATGTGCAGCTGCAGTCCCTAGAGCTCCTGCTGA Direct Loss 1 0.186781051894362 1 0.234381824731827 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329609 chr11:74329609 synonymous SNV . 0 21 hm5C_associated_SNPs_334 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 75110575 75110575 1 + C G rs17881757 75110575 + 75110555 75110595 41 GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG GCCACTTCCTTTCCTTTCAGGGGAGCGCGGCGGCAAGATGG Direct Loss 1 0.674292370037141 1 0.87686961889267 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110575 chr11:75110575 . . 0 21 hm5C_associated_SNPs_335 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75280006 75280006 1 + C T rs61733248 75280006 + 75279986 75280026 41 CTCTACAACTACTACGACGACGAGAAGGAAAAGCTGCAAAT CTCTACAACTACTACGACGATGAGAAGGAAAAGCTGCAAAT Direct Loss 1 0.770487771515279 1 0.570597887039185 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75280006 chr11:75280006 synonymous SNV . 0 21 hm5C_associated_SNPs_336 2 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:75279984-75280022
64251 chr11 117152351 117152351 1 + C T rs182447283 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGAGGAATGGAGCCAAGCTGAGCAGCCT Direct Loss 1 0.559443307204076 1 0.537027835845947 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152351 synonymous SNV . 0 21 hm5C_associated_SNPs_338 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117152320-117152360
64251 chr11 118307316 118307316 1 + C G rs9332745 118307316 + 118307296 118307336 41 GCGCCGGGGCCTAGGGGGCGCCCCGCGGCAACGCGTCCCGG GCGCCGGGGCCTAGGGGGCGGCCCGCGGCAACGCGTCCCGG Direct Loss 1 0.536440011429464 1 0.406542778015137 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307316 chr11:118307316 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_339 2 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:118307316-118307317
64251 chr11 118307385 118307385 1 + C T rs9332747 118307385 + 118307365 118307405 41 CGGCGGTGGCGGCCCCGGGGCGCCCCCCTCCCCCCCGGCTG CGGCGGTGGCGGCCCCGGGGTGCCCCCCTCCCCCCCGGCTG Direct Loss 1 0.488350144959657 1 0.29071456193924 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307385 chr11:118307385 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_340 1 0 2 GEMIN5 POSTAR2 ENCODE chr11:118307363-118307422
64251 chr11 118955679 118955679 1 + C T rs589925 118955679 + 118955659 118955699 41 GGTACTCGCCGGCCGGAGCCCCCGGCTTCCCGGGGCCGGGG GGTACTCGCCGGCCGGAGCCTCCGGCTTCCCGGGGCCGGGG Direct Loss 1 0.73608368071021 1 0.776944637298584 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMBS ENSG00000256269 UTR5 Human protein_coding chr11:118955679 chr11:118955679 . . 0 21 hm5C_associated_SNPs_341 1 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:118955660-118955700
64251 chr11 121323176 121323176 1 + C G rs200826396 121323176 + 121323156 121323196 41 GCGCGCCCTTGCCCCAGGACCGGGGCTTCCTCGTGGTGCAG GCGCGCCCTTGCCCCAGGACGGGGGCTTCCTCGTGGTGCAG Direct Loss 1 0.755056762890564 1 0.817431807518005 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SORL1 ENSG00000137642 CDS Human protein_coding chr11:121323176 chr11:121323176 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_342 0 0 3 DDX3X POSTAR2 ENCODE chr11:121323175-121323235
64251 chr11 125439445 125439445 1 + C T rs569757100 125439445 + 125439425 125439465 41 CGGTGGGCTAGGGGCAGGGCCGGAGCCGCGGCGGCGGAGCT CGGTGGGCTAGGGGCAGGGCTGGAGCCGCGGCGGCGGAGCT Direct Loss 1 0.831365196071762 1 0.846306562423706 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EI24 ENSG00000149547 UTR5 Human protein_coding chr11:125439445 chr11:125439445 . . 0 21 hm5C_associated_SNPs_343 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:125439438-125439468
64251 chr11 134094791 134094791 1 + C A rs562136526 134094791 + 134094771 134094811 41 CTCCTCGGTGCATTGCTGCTCGGGCGCCGCAGCCCGCAGCC CTCCTCGGTGCATTGCTGCTAGGGCGCCGCAGCCCGCAGCC Direct Loss 1 0.848200288779146 1 0.977732479572296 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS26B ENSG00000151502 UTR5 Human protein_coding chr11:134094791 chr11:134094791 . . 0 21 hm5C_associated_SNPs_344 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:134094780-134094800
64251 chr12 6643991 6643991 1 + C G rs1136666 6643991 + 6643971 6644011 41 CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAGGTGA CGCAGCCGAGCCACATCGCTGAGACACCATGGGGAAGGTGA Direct Loss 1 0.238546129842399 1 0.275769233703613 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GAPDH ENSG00000111640 UTR5 Human protein_coding chr12:6643991 chr12:6643991 . . 0 21 hm5C_associated_SNPs_345 0 0 50 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:6643960-6644000
64251 chr12 6647018 6647018 1 + C T rs528329572 6647018 + 6646998 6647038 41 CAAGAAGGTGGTGAAGCAGGCGTCGGAGGGCCCCCTCAAGG CAAGAAGGTGGTGAAGCAGGTGTCGGAGGGCCCCCTCAAGG Direct Loss 1 0.491955962217969 1 0.48455885052681 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647018 chr12:6647018 nonsynonymous SNV 0.126 1 21 hm5C_associated_SNPs_346 0 0 58 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:6646880-6647020
64251 chr12 6647448 6647448 1 + C A rs141846451 6647448 + 6647428 6647468 41 CACTGAATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTT CACTGAATCTCCCCTCCTCAAAGTTGCCATGTAGACCCCTT Direct Loss 1 0.620272360117131 1 0.0774421095848083 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647448 chr12:6647448 . . 0 21 hm5C_associated_SNPs_347 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6976702 6976702 1 + C G rs181882616 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACAGTGACCTTCAGCGCCTCGGCT Direct Loss 1 0.512510754608575 1 0.16979056596756 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976702 nonsynonymous SNV 0.573 0 21 hm5C_associated_SNPs_349 0 0 1 DDX3X POSTAR2 ENCODE chr12:6976699-6976744
64251 chr12 53648076 53648076 1 + C T rs530727266 53648076 + 53648056 53648096 41 GTGACTGTCCTGTGGTTTCTCCTGCCATTGCTTTGTGTTTG GTGACTGTCCTGTGGTTTCTTCTGCCATTGCTTTGTGTTTG Direct Loss 1 0.189468908076821 1 0.274000585079193 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD5 ENSG00000182544 UTR3 Human protein_coding chr12:53648076 chr12:53648076 . . 0 21 hm5C_associated_SNPs_353 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:53648011-53648100
64251 chr12 56388307 56388307 1 + C T rs187146028 56388307 + 56388287 56388327 41 TAGTTTTCTTTTGTTTATTTCCCAGCTCATTTTTTTCTTCT TAGTTTTCTTTTGTTTATTTTCCAGCTCATTTTTTTCTTCT Direct Loss 1 0.142544915727992 1 0.621888399124146 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56388307 chr12:56388307 . . 0 21 hm5C_associated_SNPs_356 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:56388256-56388396
64251 chr12 56664231 56664231 1 + C T rs77131854 56664231 + 56664211 56664251 41 CTGTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTATGCT CTGTTTCTCCTCTCAATTTCTCAGAAATTGGGTTCTATGCT Direct Loss 1 0.396918317889335 1 0.695840775966644 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ10A ENSG00000135469 UTR3 Human protein_coding chr12:56664231 chr12:56664231 . . 0 21 hm5C_associated_SNPs_357 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:56664201-56664233
64251 chr12 57624701 57624701 1 + C G rs73338162 57624701 + 57624681 57624721 41 GACAGGCCAGGAGAGCCTGTCGGACAGTGATCCTGAGATGT GACAGGCCAGGAGAGCCTGTGGGACAGTGATCCTGAGATGT Direct Loss 1 0.392763977552927 1 0.411809414625168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57624701 chr12:57624701 nonsynonymous SNV 0.761 1 21 hm5C_associated_SNPs_359 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57624680-57624720
64251 chr12 72096321 72096321 1 + C T rs146291637 72096321 + 72096301 72096341 41 GGCTAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCC GGCTAGGCTGGTCTCGAACTTCTGACCTCAAGTGATCTGCC Direct Loss 1 0.571300050835696 1 0.755488753318787 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096321 chr12:72096321 . . 0 21 hm5C_associated_SNPs_361 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 112460375 112460375 1 + C T rs185294277 112460375 + 112460355 112460395 41 GAGAAGAACAAGATGAGTGACGGGAAGAAGGAGGAGCTCCA GAGAAGAACAAGATGAGTGATGGGAAGAAGGAGGAGCTCCA Direct Loss 1 0.906310573824498 1 0.694365620613098 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460375 chr12:112460375 synonymous SNV . 0 21 hm5C_associated_SNPs_366 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:112460255-112460396
64251 chr12 120898045 120898045 1 + C A rs548201 120898045 + 120898025 120898065 41 TGGAAGACATTATTTATCTGCCTTTAACTCCCCCCAAAGGA TGGAAGACATTATTTATCTGACTTTAACTCCCCCCAAAGGA Direct Loss 1 0.0175631150322055 1 0.0535219311714172 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GATC ENSG00000257218 UTR3 Human protein_coding chr12:120898045 chr12:120898045 . . 0 21 hm5C_associated_SNPs_368 0 0 18 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:120897979-120898062
64251 chr12 122064537 122064537 1 + C T rs184479614 122064537 + 122064517 122064557 41 TCGACCTCGTCCTCCTCGTCCTGTGCGGCCGGCCGGGTGAG TCGACCTCGTCCTCCTCGTCTTGTGCGGCCGGCCGGGTGAG Direct Loss 1 0.385700538278274 1 0.413872748613358 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ORAI1 ENSG00000182500 UTR5 Human other chr12:122064537 chr12:122064537 . . 0 21 hm5C_associated_SNPs_369 0 0 3 DDX3X POSTAR2 ENCODE chr12:122064503-122064569
64251 chr12 122627131 122627131 1 + C T rs139078759 122627131 + 122627111 122627151 41 GACTCAGCCCAGGGCCTTCTCGGATGTCACCTCACCGCTGT GACTCAGCCCAGGGCCTTCTTGGATGTCACCTCACCGCTGT Direct Loss 1 0.75243047643317 1 0.752289354801178 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MLXIP ENSG00000175727 UTR3 Human protein_coding chr12:122627131 chr12:122627131 . . 0 21 hm5C_associated_SNPs_370 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:122627060-122627140
64251 chr12 125424560 125424560 1 + C A rs184562645 125424560 + 125424540 125424580 41 GCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATCT GCTTTGCACGTATGAGGCCCAGGGTTCAATCCCCGGCATCT Direct Loss 1 0.716493090264164 1 0.517791569232941 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424560 chr12:125424560 . . 0 21 hm5C_associated_SNPs_372 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424566 125424566 1 + C T rs112048799 125424566 + 125424546 125424586 41 CACGTATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGAC CACGTATGAGGCCCCGGGTTTAATCCCCGGCATCTCCAGAC Direct Loss 1 0.13813908594938 1 0.0488211512565613 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424566 chr12:125424566 . . 0 21 hm5C_associated_SNPs_373 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr13 96445995 96445995 1 + C A rs532697934 96445995 + 96445975 96446015 41 CAAAGTGTTGGGATTACAGGCGTGAGCCACTGCGCCTGGCC CAAAGTGTTGGGATTACAGGAGTGAGCCACTGCGCCTGGCC Direct Loss 1 0.813769928389921 1 0.79771888256073 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96445995 chr13:96445995 . . 0 21 hm5C_associated_SNPs_379 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 99858020 99858020 1 + C T rs371286261 99858020 + 99858000 99858040 41 ATTGATCGCCAGAGTTGATTCGGCTGATCTGGCTGGCTAGG ATTGATCGCCAGAGTTGATTTGGCTGATCTGGCTGGCTAGG Direct Loss 1 0.403731914407203 1 0.258086562156677 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858020 chr13:99858020 . . 0 21 hm5C_associated_SNPs_380 0 0 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:99857980-99858020
64251 chr13 99858111 99858111 1 + C T rs137933235 99858111 + 99858091 99858131 41 GCGTGCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAG GCGTGCTCGGTCGAAGAGGATGACCATCCCCGATAGAGGAG Direct Loss 1 0.197163086678921 1 0.123411893844604 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858111 chr13:99858111 . . 0 21 hm5C_associated_SNPs_381 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858156 + 99858136 99858176 41 GGTCTTTGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGC GGTCTTTGGTCAAGGGTATAGGAGTAGCTGCGCTCCCCTGC Direct Loss 1 0.591701194122948 1 0.835578322410583 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858156 chr13:99858156 . . 0 21 hm5C_associated_SNPs_382 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 113977378 113977378 1 + C A rs8001808 113977378 + 113977358 113977398 41 TTACAACAGTAGAGAGGGAACATCCTAAGACAGAGGAACTC TTACAACAGTAGAGAGGGAAAATCCTAAGACAGAGGAACTC Direct Loss 1 0.333690685466116 1 0.420828700065613 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113977378 chr13:113977378 . . 0 21 hm5C_associated_SNPs_383 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:113977360-113977380
64251 chr14 21078296 21078296 1 + C G rs115267088 21078296 + 21078276 21078316 41 AACTGTTAGCCAGTAGGTAGCGTGGCCGAGCGGTCTAAGGC AACTGTTAGCCAGTAGGTAGGGTGGCCGAGCGGTCTAAGGC Direct Loss 1 0.563700506769255 1 0.567432701587677 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078296 chr14:21078296 . . 0 21 hm5C_associated_SNPs_384 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:21078278-21078320
64251 chr14 21078338 21078338 1 + C G rs144037355 21078338 + 21078318 21078358 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAA CTGGATTAAGGCTCCAGTCTGTTCGGGGGCGTGGGTTCGAA Direct Loss 1 0.556723549929155 1 0.0884361863136292 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078338 chr14:21078338 . . 0 21 hm5C_associated_SNPs_385 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221663 chr14:21078320-21078340
64251 chr14 21151484 21151484 1 + C T rs115156442 21151484 + 21151464 21151504 41 TGTAGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGTACTTAATGTGTGGTTATCCTTAGGTCGCTGGTTCG Direct Loss 1 0.186251925346959 1 0.0901210010051727 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151484 chr14:21151484 . . 0 21 hm5C_associated_SNPs_386 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21152235 21152235 1 + C G rs146849858 21152235 + 21152215 21152255 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTA AGAGGTCCCGGGTTCAAATCGCGGACGAGCCCTCGTGGCTA Direct Loss 1 0.796827924469996 1 0.934726238250732 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152235 chr14:21152235 . . 0 21 hm5C_associated_SNPs_387 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 23341349 23341349 1 + C T rs56859206 23341349 + 23341329 23341369 41 CTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGCAT CTCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGGCAT Direct Loss 1 0.585102719666435 1 0.170264005661011 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341349 chr14:23341349 . . 0 21 hm5C_associated_SNPs_388 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 50053582 50053582 1 + C T rs531730938 50053582 + 50053562 50053602 41 CTCCAGCCTGGGCAACATAGCGAGACCCCGTCTCTTTTGAA CTCCAGCCTGGGCAACATAGTGAGACCCCGTCTCTTTTGAA Direct Loss 1 0.707190863471216 1 0.433125138282776 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053582 chr14:50053582 . . 0 21 hm5C_associated_SNPs_389 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 61263067 61263067 1 + C T rs113043441 61263067 + 61263047 61263087 41 GTTGACAAGGAGGTTGAGATCAGGAAAAAAGTGCTAAAGAT GTTGACAAGGAGGTTGAGATTAGGAAAAAAGTGCTAAAGAT Direct Loss 1 0.968418069015633 1 0.799443602561951 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61263067 chr14:61263067 synonymous SNV . 0 21 hm5C_associated_SNPs_390 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:61263007-61263072
64251 chr14 75369890 75369890 1 + C G rs141856572 75369890 + 75369870 75369910 41 AGTGGGACCAAGCGTGGTCCCGAGGAAGGGCCAGAGCCTGG AGTGGGACCAAGCGTGGTCCGGAGGAAGGGCCAGAGCCTGG Direct Loss 1 0.947923997666506 1 0.903193175792694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DLST ENSG00000119689 UTR3 Human protein_coding chr14:75369890 chr14:75369890 . . 0 21 hm5C_associated_SNPs_391 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:75369840-75369895
64251 chr14 100996330 100996330 1 + C T rs149360659 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TATCACCCCGTGCTGCCCTCTGTCCTCGCCACCTGCTCCTG Direct Loss 1 0.211307336321648 1 0.781738758087158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996330 synonymous SNV . 0 21 hm5C_associated_SNPs_392 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr14 102499701 102499701 1 + C T rs75075497 102499701 + 102499681 102499721 41 GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATCCG GACAACCAGCAGAAGGCCAATGAGGTGGAGCAGATGATCCG Direct Loss 1 0.308522776532691 1 0.741722762584686 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499701 chr14:102499701 synonymous SNV . 0 21 hm5C_associated_SNPs_393 2 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 105177427 105177427 1 + C T rs59751492 105177427 + 105177407 105177447 41 CCCTCCCAGGGCAGCCACACCGGTGACGCCGACGGCTTCAA CCCTCCCAGGGCAGCCACACTGGTGACGCCGACGGCTTCAA Direct Loss 1 0.459860251902584 1 0.752070784568787 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105177427 chr14:105177427 synonymous SNV . 0 21 hm5C_associated_SNPs_394 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105177424-105177446
64251 chr15 29346590 29346590 1 + C T rs148760039 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAACTGCCCATTCTGGAGGATGAGCCCTCCGTCC Direct Loss 1 0.761219781790905 1 0.92180871963501 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346590 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_396 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr15 31221493 31221493 1 + C T rs80120912 31221493 + 31221473 31221513 41 TGCAGCTGATTCATGATGCCCCCGAGGAGAGCCTGCGGGCC TGCAGCTGATTCATGATGCCTCCGAGGAGAGCCTGCGGGCC Direct Loss 1 0.846542486672243 1 0.748108863830566 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31221493 chr15:31221493 nonsynonymous SNV 0.003 0 21 hm5C_associated_SNPs_397 0 0 3 GRWD1 POSTAR2 ENCODE chr15:31221419-31221508
64251 chr15 31669325 31669325 1 + C T rs570086684 31669325 + 31669305 31669345 41 TGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGC TGGAAACCAGGTGTGTGAGCTGAATGCCTGCCAGGCCATGC Direct Loss 1 0.405888571644426 1 0.088512659072876 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLF13 ENSG00000169926 UTR3 Human protein_coding chr15:31669325 chr15:31669325 . . 0 21 hm5C_associated_SNPs_398 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:31669312-31669334
64251 chr15 36989578 36989578 1 + C A rs117638434 36989578 + 36989558 36989598 41 GACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTA GACTTGCTTCTAGAGAAAAAACTGTCCTTCCTAGGTAAGTA Direct Loss 1 0.113535742317145 1 0.0911529660224915 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989578 chr15:36989578 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_399 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 44159077 44159077 1 + C T rs145208595 44159077 + 44159057 44159097 41 CTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAA CTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGTGCTGGAA Direct Loss 1 0.718615313978968 1 0.333709478378296 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159077 chr15:44159077 . . 0 21 hm5C_associated_SNPs_402 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44581338 44581338 1 + C G rs112768081 44581338 + 44581318 44581358 41 AACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGA AACTACTGGAGCATCTCCTCGCGCCACGTCCTGCTTCAGGA Direct Loss 1 0.267773082164536 1 0.750412106513977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CASC4 ENSG00000166734 CDS Human protein_coding chr15:44581338 chr15:44581338 synonymous SNV . 0 21 hm5C_associated_SNPs_403 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581300-44581340
64251 chr15 64434067 64434067 1 + C T rs529664908 64434067 + 64434047 64434087 41 AGTTTCGGAACCACTGAGATCGGTCCTTGATTTGATGAGAG AGTTTCGGAACCACTGAGATTGGTCCTTGATTTGATGAGAG Direct Loss 1 0.40788689187319 1 0.401771992444992 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX1 ENSG00000028528 UTR3 Human protein_coding chr15:64434067 chr15:64434067 . . 0 21 hm5C_associated_SNPs_405 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:64434023-64434078
64251 chr15 75631889 75631889 1 + C T rs111614145 75631889 + 75631869 75631909 41 GGGTGATCAGAACTGATTATCGGGCACCTGCCCTGTTCTGA GGGTGATCAGAACTGATTATTGGGCACCTGCCCTGTTCTGA Direct Loss 1 0.773420463666488 1 0.940783321857452 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control COMMD4 ENSG00000140365 intronic Human protein_coding chr15:75631889 chr15:75631889 . . 0 21 hm5C_associated_SNPs_407 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:75631842-75631896
64251 chr15 78458638 78458638 1 + C T rs2304826 78458638 + 78458618 78458658 41 TGTTTTGCTACAATTAAGGACGGAAAGGTAACAGGAATCTT TGTTTTGCTACAATTAAGGATGGAAAGGTAACAGGAATCTT Direct Loss 1 0.632990830078989 1 0.246089428663254 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IDH3A ENSG00000166411 CDS Human protein_coding chr15:78458638 chr15:78458638 synonymous SNV . 0 21 hm5C_associated_SNPs_408 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:78458566-78458640
64251 chr15 79152975 79152975 1 + C G rs117252182 79152975 + 79152955 79152995 41 GGTTCGAGCCCCACGTTGGGCGGGTTTGTTTTGCTTTCGTT GGTTCGAGCCCCACGTTGGGGGGGTTTGTTTTGCTTTCGTT Direct Loss 1 0.675026239335698 1 0.734547734260559 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152975 chr15:79152975 . . 0 21 hm5C_associated_SNPs_409 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:79152958-79152985
64251 chr15 80037068 80037068 1 + C G rs185560627 80037068 + 80037048 80037088 41 GGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTACT GGTTCAAATCCGGGTGCCCCGTGCCTGAAAGTTTTCTTACT Direct Loss 1 0.327202688024486 1 0.308072686195374 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037068 chr15:80037068 . . 0 21 hm5C_associated_SNPs_410 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 81294357 81294357 1 + C A rs185291823 81294357 + 81294337 81294377 41 CTGCAAGCCCTCTAGGAGGCCGAAAGCTGCAGCCCCTCCCC CTGCAAGCCCTCTAGGAGGCAGAAAGCTGCAGCCCCTCCCC Direct Loss 1 0.644056858571125 1 0.775018811225891 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81294357 chr15:81294357 . . 0 21 hm5C_associated_SNPs_411 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:81294340-81294360
64251 chr16 633706 633706 1 + C T rs1045283 633706 + 633686 633726 41 CAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTAC CAGCCTCAGTGTCAAGGGCCTGCCCACTGACCCAGCCGTAC Direct Loss 1 0.340508357873547 1 0.0371821224689484 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGQ ENSG00000007541 UTR3 Human protein_coding chr16:633706 chr16:633706 . . 0 21 hm5C_associated_SNPs_414 0 0 1 LSM11 POSTAR2 ENCODE chr16:633676-633739
64251 chr16 718514 718514 1 + C G rs7204542 718514 + 718494 718534 41 CCCCGCGCGGAGGAGATCACCATCCCCGCGGACGTCACCCC CCCCGCGCGGAGGAGATCACGATCCCCGCGGACGTCACCCC Direct Loss 1 0.310465503922422 1 0.577567756175995 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:718514 chr16:718514 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_415 0 0 16 U2AF2 POSTAR2 GSE83923,CSM2221660 chr16:718513-718514
64251 chr16 2011269 2011269 1 + C T rs201009092 2011269 + 2011249 2011289 41 ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA ATCATGTGCATGTATGAAGCTGAAATGCAGTGGAAGAGGGA Direct Loss 1 0.602289292682753 1 0.2791468501091 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011269 chr16:2011269 synonymous SNV . 0 21 hm5C_associated_SNPs_416 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr16 2015256 2015256 1 + C T rs371847121 2015256 + 2015236 2015276 41 CGCCCAGAGCCCCCGGGGGCCTCAGCTCACCGCGCGCTGCC CGCCCAGAGCCCCCGGGGGCTTCAGCTCACCGCGCGCTGCC Direct Loss 1 0.360092632935363 1 0.0903821885585785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015256 chr16:2015256 . . 0 21 hm5C_associated_SNPs_417 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 3208961 3208961 1 + C A rs550170016 3208961 + 3208941 3208981 41 TATGATTCTCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTTGGGTGAGAGAGGTCCCGGGTTCAAAT Direct Loss 1 0.72623629529646 1 0.374118268489838 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208961 chr16:3208961 . . 0 21 hm5C_associated_SNPs_419 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3222109 3222109 1 + C G rs150958924 3222109 + 3222089 3222129 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGG AGAGGTCCCGGGTTCAAATCGCGGACGAGCCCTAGAAGTGG Direct Loss 1 0.647356970343487 1 0.89064085483551 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222109 chr16:3222109 . . 0 21 hm5C_associated_SNPs_420 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222110 + 3222090 3222130 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGT GAGGTCCCGGGTTCAAATCCTGGACGAGCCCTAGAAGTGGT Direct Loss 1 0.34978846105255 1 0.723714351654053 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222110 chr16:3222110 . . 0 21 hm5C_associated_SNPs_421 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3241503 3241503 1 + C A rs117373271 3241503 + 3241483 3241523 41 TAAAACGTTCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGA TAAAACGTTCCCAGGGAAGCACGGCTAGCTCAGTCGGTAGA Direct Loss 1 0.252337892513754 1 0.477115094661713 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241503 chr16:3241503 . . 0 21 hm5C_associated_SNPs_422 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3242014 3242014 1 + C G rs533908867 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTGTCGCTTAGGATGCGAGAGGT Direct Loss 1 0.711529414697761 1 0.755060076713562 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242014 . . 0 21 hm5C_associated_SNPs_423 0 0 29 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242049 3242049 1 + C A rs192567340 3242049 + 3242029 3242069 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTA AGAGGTCCCGGGTTCAAATCACGGACGAGCCCCTCTTCTTA Direct Loss 1 0.732233907039136 1 0.912603378295898 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242049 chr16:3242049 . . 0 21 hm5C_associated_SNPs_424 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242054 + 3242034 3242074 41 TCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT TCCCGGGTTCAAATCCCGGAGGAGCCCCTCTTCTTATTTTT Direct Loss 1 0.178110430560265 1 0.4461510181427 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242054 chr16:3242054 . . 0 21 hm5C_associated_SNPs_425 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 5128001 5128001 1 + C G rs7195893 5128001 + 5127981 5128021 41 ATGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA ATGAAGCTGGGCAGCATGCAGTCTCCGTTCAGGGCCCGGTA Direct Loss 1 0.353280090665212 1 0.0963397026062012 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128001 chr16:5128001 nonsynonymous SNV 0.000 2 21 hm5C_associated_SNPs_426 0 0 3 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr16 14989626 14989626 1 + C T rs554946974 14989626 + 14989606 14989646 41 TCAGCCTGTGCTGCTGGGCCCGCACCCCATGTCCCTTGTCA TCAGCCTGTGCTGCTGGGCCTGCACCCCATGTCCCTTGTCA Direct Loss 1 0.303474458674212 1 0.112095534801483 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NOMO1 ENSG00000103512 UTR3 Human protein_coding chr16:14989626 chr16:14989626 . . 0 21 hm5C_associated_SNPs_428 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:14987020-14989843
64251 chr16 22308511 22308511 1 + C T rs117203517 22308511 + 22308491 22308531 41 GATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCC GATTAAGGCTCCAGTCTCTTTGGGGGCGTGGGTTCGAATCC Direct Loss 1 0.945282204268583 1 0.965947031974792 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target POLR3E ENSG00000058600 upstream Human protein_coding chr16:22308511 chr16:22308511 . . 0 21 hm5C_associated_SNPs_429 0 0 8 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:22308500-22308540
64251 chr16 29706442 29706442 1 + C T rs200392225 29706442 + 29706422 29706462 41 GGGCTCCTGGTGGGCGGGGCCGCCTCGCACCGCTACGACCT GGGCTCCTGGTGGGCGGGGCTGCCTCGCACCGCTACGACCT Direct Loss 1 0.522602810609065 1 0.163487106561661 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706442 chr16:29706442 synonymous SNV . 0 21 hm5C_associated_SNPs_432 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 29706444 29706444 1 + C T rs2303255 29706444 + 29706424 29706464 41 GCTCCTGGTGGGCGGGGCCGCCTCGCACCGCTACGACCTGG GCTCCTGGTGGGCGGGGCCGTCTCGCACCGCTACGACCTGG Direct Loss 1 0.248789426567705 1 0.389834016561508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706444 chr16:29706444 nonsynonymous SNV 0.221 1 21 hm5C_associated_SNPs_433 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 30976363 30976363 1 + C G rs201391072 30976363 + 30976343 30976383 41 CTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCT CTCCTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAACCT Direct Loss 1 0.127160818893203 1 0.265071749687195 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976363 chr16:30976363 nonsynonymous SNV 0.977 3 21 hm5C_associated_SNPs_434 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30990965 30990965 1 + C A rs150728823 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCGGACGAGGCAGAGCGCCCTAGGCCCCTGCT Direct Loss 1 0.307122355446043 1 0.771870791912079 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990965 synonymous SNV . 0 21 hm5C_associated_SNPs_435 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:30990952-30990990
64251 chr16 31194158 31194158 1 + C G rs185469113 31194158 + 31194138 31194178 41 AACGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTAC AACGATTCTCCTGCCTCAGCGTCCTGAGTAGCTGGGATTAC Direct Loss 1 0.121166694069779 1 0.368629097938538 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUS ENSG00000260304 ncRNA_exonic Human antisense chr16:31194158 chr16:31194158 . . 0 21 hm5C_associated_SNPs_436 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr16:31194100-31194160
64251 chr16 53524831 53524831 1 + C T rs28670961 53524831 + 53524811 53524851 41 GTGTGCAATGTCTGAGTGAACCTGTATAAGTGGAGGCACTT GTGTGCAATGTCTGAGTGAATCTGTATAAGTGGAGGCACTT Direct Loss 1 0.234463070270198 1 0.0945850908756256 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBL2 ENSG00000103479 UTR3 Human protein_coding chr16:53524831 chr16:53524831 . . 0 21 hm5C_associated_SNPs_437 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr16:53524661-53524907
64251 chr16 57333890 57333890 1 + C G rs184840621 57333890 + 57333870 57333910 41 TGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTC TGGCCGAGCGGTCTAAGGCGGTGCGTTCAGGTCGCAGTCTC Direct Loss 1 0.76341563101379 1 0.479648739099503 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333890 chr16:57333890 . . 0 21 hm5C_associated_SNPs_438 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333911 57333911 1 + C A rs144318503 57333911 + 57333891 57333931 41 TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAA TGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTCGAA Direct Loss 1 0.284347818649209 1 0.203026443719864 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333911 chr16:57333911 . . 0 21 hm5C_associated_SNPs_439 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 69733124 69733124 1 + C A rs55719937 69733124 + 69733104 69733144 41 CTGCACTGTGGATGAAGTGGCGACTGGCTTGTGTGCTGACT CTGCACTGTGGATGAAGTGGAGACTGGCTTGTGTGCTGACT Direct Loss 1 0.198175698441881 1 0.496749609708786 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NFAT5 ENSG00000102908 UTR3 Human protein_coding chr16:69733124 chr16:69733124 . . 0 21 hm5C_associated_SNPs_442 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:69733035-69733158
64251 chr16 70194013 70194013 1 + C T rs142098932 70194013 + 70193993 70194033 41 CAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGT CAAAGTATATTGGCCTCAAATGGAGACCCAGGGTTGCCAGT Direct Loss 1 0.688663403200598 1 0.769926607608795 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194013 chr16:70194013 . . 0 21 hm5C_associated_SNPs_443 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70822624 70822624 1 + C T rs115714969 70822624 + 70822604 70822644 41 TGGTTCAGTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCG TGGTTCAGTGGTAGAATTCTTGCCTGCCATGCGGGCGGCCG Direct Loss 1 0.594186682650177 1 0.10991182923317 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822624 chr16:70822624 . . 0 21 hm5C_associated_SNPs_444 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 71460443 71460443 1 + C A rs552359940 71460443 + 71460423 71460463 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGA CAGTCTCATAATCTGAAGGTACTGAGTTCGAGCCTCAGAGA Direct Loss 1 0.336433583218365 1 0.0746335685253143 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460443 chr16:71460443 . . 0 21 hm5C_associated_SNPs_445 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460455 71460455 1 + C A rs375616702 71460455 + 71460435 71460475 41 CTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTT CTGAAGGTCCTGAGTTCGAGACTCAGAGAGGGCAGCTGTTT Direct Loss 1 0.18737782849651 1 0.0859120488166809 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460455 chr16:71460455 . . 0 21 hm5C_associated_SNPs_446 0 0 43 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 89627863 89627863 1 + C T rs575878848 89627863 + 89627843 89627883 41 GATGACATTCTCCGGAATCGCTGTACGGCCTTGATGAAAGC GATGACATTCTCCGGAATCGTTGTACGGCCTTGATGAAAGC Direct Loss 1 0.402021488321806 1 0.365368366241455 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627863 chr16:89627863 . . 0 21 hm5C_associated_SNPs_449 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89630613 89630613 1 + C T rs546979554 89630613 + 89630593 89630633 41 GGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCGTG GGTGCCGGTATTGAGGCACCTAGGGAGCTGTTACTGGCGTG Direct Loss 1 0.891066356316822 1 0.80372166633606 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630613 chr16:89630613 . . 0 21 hm5C_associated_SNPs_450 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr16:89630596-89630615
64251 chr17 3629843 3629843 1 + C T rs190744073 3629843 + 3629823 3629863 41 TCTGAAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCT TCTGAAAGAAGTAAACTAGCTGGGCACAGTGGCGTGCGCCT Direct Loss 1 0.774910907894414 1 0.652640998363495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629843 chr17:3629843 . . 0 21 hm5C_associated_SNPs_451 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:3629821-3629853
64251 chr17 4859364 4859364 1 + C T rs2230257 4859364 + 4859344 4859384 41 CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA CCCAAGAGGATTGCCCAGGCTGTTGAGAAGAAGGCCTGCAA Direct Loss 1 0.263267100538497 1 0.300458490848541 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859364 chr17:4859364 synonymous SNV . 0 21 hm5C_associated_SNPs_452 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4901244 4901244 1 + C G rs566687755 4901244 + 4901224 4901264 41 CCCGCCCCTCGCTCCCGCCCCAGCTCGCGCTGCCCGGGCGG CCCGCCCCTCGCTCCCGCCCGAGCTCGCGCTGCCCGGGCGG Direct Loss 1 0.562321111698595 1 0.330499589443207 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1C ENSG00000129250 UTR5 Human protein_coding chr17:4901244 chr17:4901244 . . 0 21 hm5C_associated_SNPs_453 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:4901240-4901260
64251 chr17 7479892 7479892 1 + C T rs11078698 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCGCCTCCTGTCATGCCTGTATCGGGGGCACCAA Direct Loss 1 0.67851461115036 1 0.0401758253574371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479892 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_456 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7491331 7491331 1 + C T rs545206972 7491331 + 7491311 7491351 41 TGGGACTGTCTCCCGGACCCCAGTGCTGGGGTGGGGGAAGG TGGGACTGTCTCCCGGACCCTAGTGCTGGGGTGGGGGAAGG Direct Loss 1 0.640431686029065 1 0.305141448974609 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MPDU1 ENSG00000129255 UTR3 Human protein_coding chr17:7491331 chr17:7491331 . . 0 21 hm5C_associated_SNPs_457 1 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7491318-7491396
64251 chr17 7810512 7810512 1 + C G rs139484082 7810512 + 7810492 7810532 41 AGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGCCAGAGAAG AGAAGGAGGAAGCTGAAAACGAGGAGGAAAAGCCAGAGAAG Direct Loss 1 0.879029416107202 1 0.877872467041016 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810512 chr17:7810512 nonsynonymous SNV 0.910 1 21 hm5C_associated_SNPs_458 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr17 8090563 8090563 1 + C T rs192993858 8090563 + 8090543 8090583 41 GCGGTGCCTCCGTGTTTCCCCCACGCTTTTGCCAACATTAA GCGGTGCCTCCGTGTTTCCCTCACGCTTTTGCCAACATTAA Direct Loss 1 0.244604004714784 1 0.0591140687465668 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 ncRNA_exonic Human other chr17:8090563 chr17:8090563 . . 0 21 hm5C_associated_SNPs_459 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr17:8090518-8090573
64251 chr17 8090943 8090943 1 + C T rs187152371 8090943 + 8090923 8090963 41 CAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGG CAGTTGGTTAGAGCGTGGTGTTAATAACGCCAAGGTCGCGG Direct Loss 1 0.182947063860826 1 0.079105406999588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090943 chr17:8090943 . . 0 21 hm5C_associated_SNPs_460 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8124912 8124912 1 + C A rs182964059 8124912 + 8124892 8124932 41 GCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCA GCTGCCTTCCAAGCAGTTGAACCGGGTTCGATTCCCGGCCA Direct Loss 1 0.842503958129928 1 0.776789128780365 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124912 chr17:8124912 . . 0 21 hm5C_associated_SNPs_461 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 15902823 15902823 1 - G C rs200004394 15902823 - 15902803 15902843 41 GAGCGCGCGAAGTACGGGACCGAGGTCGTGTGTGGCTGCGC GAGCGCGCGAAGTACGGGACGGAGGTCGTGTGTGGCTGCGC Direct Loss 1 0.900267266095562 1 0.804172158241272 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC19 ENSG00000011295;ENSG00000214941 CDS Human other chr17:15902823 chr17:15902823 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_462 2 0 1 PRPF8 POSTAR2 ENCODE chr17:15902768-15902841
64251 chr17 17080665 17080665 1 + C A rs200762157 17080665 + 17080645 17080685 41 AGCAGGTTGAAGGAGCAGCTCAAGGCTGCAACGGAAGCACT AGCAGGTTGAAGGAGCAGCTAAAGGCTGCAACGGAAGCACT Direct Loss 1 0.519141336704421 1 0.469192951917648 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17080665 chr17:17080665 synonymous SNV . 0 21 hm5C_associated_SNPs_463 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:17080660-17080681
64251 chr17 20217460 20217460 1 + C T rs191585744 20217460 + 20217440 20217480 41 ATTACTGTCCACTGACCCTGCTCTGCCCACCACCCAGCTGC ATTACTGTCCACTGACCCTGTTCTGCCCACCACCCAGCTGC Direct Loss 1 0.166639170484768 1 0.0778951644897461 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPECC1 ENSG00000263494 ncRNA_intronic Human lincRNA chr17:20217460 chr17:20217460 . . 0 21 hm5C_associated_SNPs_465 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:20217430-20217525
64251 chr17 29877141 29877141 1 + C A rs575764901 29877141 + 29877121 29877161 41 GTCTCGTAAACCGAAGATCGCGGGTTCGAACCCCGTCCGTG GTCTCGTAAACCGAAGATCGAGGGTTCGAACCCCGTCCGTG Direct Loss 1 0.843806940121435 1 0.390362918376923 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877141 chr17:29877141 . . 0 21 hm5C_associated_SNPs_466 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 30348583 30348583 1 + C T rs189879515 30348583 + 30348563 30348603 41 AGGTGGTTCCGCTTCTCAACCGGGATCAGAACCAGGCCCTA AGGTGGTTCCGCTTCTCAACTGGGATCAGAACCAGGCCCTA Direct Loss 1 0.958688461014426 1 0.899124681949615 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30348583 chr17:30348583 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_467 0 0 1 ZNF622 POSTAR2 ENCODE chr17:30348567-30348639
64251 chr17 34050874 34050874 1 + C T rs116786997 34050874 + 34050854 34050894 41 TGCTAACATTAGGGCACAACCTGTTGGATAGTTTTAGCTTC TGCTAACATTAGGGCACAACTTGTTGGATAGTTTTAGCTTC Direct Loss 1 0.348192492231779 1 0.126444041728973 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34050874 chr17:34050874 . . 0 21 hm5C_associated_SNPs_468 0 0 23 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:34050840-34050900
64251 chr17 34052508 34052508 1 + C T rs114642173 34052508 + 34052488 34052528 41 GTTGCAAAGCTTGTGGGGAGCGGTCCCACAAAGCACTTTCT GTTGCAAAGCTTGTGGGGAGTGGTCCCACAAAGCACTTTCT Direct Loss 1 0.349604329145079 1 0.308046579360962 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34052508 chr17:34052508 . . 0 21 hm5C_associated_SNPs_469 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:34052496-34052520
64251 chr17 34070289 34070289 1 + C T rs117695737 34070289 + 34070269 34070309 41 AGGCACCTGGGGTGGGGGGGCGGAGCCCAGGCCTCTGGCTG AGGCACCTGGGGTGGGGGGGTGGAGCCCAGGCCTCTGGCTG Direct Loss 1 0.661352847515669 1 0.794426679611206 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RASL10B ENSG00000141150 UTR3 Human other chr17:34070289 chr17:34070289 . . 0 21 hm5C_associated_SNPs_470 0 0 1 FBL POSTAR2 GSE43666,GSM1067865 chr17:34070249-34070294
64251 chr17 37023968 37023968 1 + C A rs182985889 37023968 + 37023948 37023988 41 GGTTCAAATCCGGGTGCCCCCTCGGGTTTCTTTAAGTTTTT GGTTCAAATCCGGGTGCCCCATCGGGTTTCTTTAAGTTTTT Direct Loss 1 0.769334176657781 1 0.341749906539917 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPL23;LASP1 ENSG00000244086;ENSG00000002834 intergenic Human other chr17:37023968 chr17:37023968 . . 0 21 hm5C_associated_SNPs_471 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr17:37023920-37023980
64251 chr17 37358647 37358647 1 + C A rs2228666 37358647 + 37358627 37358667 41 TCCATTCCCGGGCTCGATGCCGGAAAAACACCTTGGCCCGC TCCATTCCCGGGCTCGATGCAGGAAAAACACCTTGGCCCGC Direct Loss 1 0.916179236374094 1 0.836480021476746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358647 chr17:37358647 synonymous SNV . 0 21 hm5C_associated_SNPs_472 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 39978704 39978704 1 + C T rs372369060 39978704 + 39978684 39978724 41 TGAGACACAGAGGCCCACTGCGAGGGGGACAGTGGCGGTGG TGAGACACAGAGGCCCACTGTGAGGGGGACAGTGGCGGTGG Direct Loss 1 0.901083166030854 1 0.816224992275238 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 UTR3 Human protein_coding chr17:39978704 chr17:39978704 . . 0 21 hm5C_associated_SNPs_473 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39978687-39978729
64251 chr17 43185023 43185023 1 + C A rs2269746 43185023 + 43185003 43185043 41 TCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCC TCTTTCCTACCTTGGGGGAAACTGGAACTTGGAAAGGCTCC Direct Loss 1 0.298601628201797 1 0.31068417429924 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NMT1 ENSG00000136448 UTR3 Human protein_coding chr17:43185023 chr17:43185023 . . 0 21 hm5C_associated_SNPs_475 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:43184994-43185033
64251 chr17 46052092 46052092 1 + C T rs186237369 46052092 + 46052072 46052112 41 ACCACTCACCTCTTGGTTAGCGGGAGTGTGCTGCCCCCACC ACCACTCACCTCTTGGTTAGTGGGAGTGTGCTGCCCCCACC Direct Loss 1 0.951980590282696 1 0.876707553863525 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK5RAP3 ENSG00000108465 intronic Human protein_coding chr17:46052092 chr17:46052092 . . 0 21 hm5C_associated_SNPs_476 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr17:46052080-46052100
64251 chr17 65822320 65822320 1 + C G rs73351760 65822320 + 65822300 65822340 41 GAGACCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGA GAGACCCAGGATTCTGAGGAGGACGAGGAGGATGAGATGGA Direct Loss 1 0.301837083692166 1 0.787409842014313 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822320 chr17:65822320 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_478 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 74557777 74557777 1 + C G rs137955606 74557777 + 74557757 74557797 41 ACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTTTGGCT ACTGAGGGAAATAATCTATTGTGAGGCTTAAGGGTTTGGCT Direct Loss 1 0.517697286579725 1 0.495340406894684 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557777 chr17:74557777 . . 0 21 hm5C_associated_SNPs_479 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 75398205 75398205 1 + C G rs189537244 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCCCACCCCGGAGGGTGCAGACTCCCCTACTCCGAGC Direct Loss 1 0.377363946238442 1 0.254197776317596 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398205 synonymous SNV . 0 21 hm5C_associated_SNPs_480 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:75398200-75398220
64251 chr17 76417755 76417755 1 + C T rs183641996 76417755 + 76417735 76417775 41 TCTGTTTGGAGAGAGGCTCTCGGTAAACAGAGTTCGCATTC TCTGTTTGGAGAGAGGCTCTTGGTAAACAGAGTTCGCATTC Direct Loss 1 0.831745090390429 1 0.350349426269531 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PGS1 ENSG00000087157 intronic Human protein_coding chr17:76417755 chr17:76417755 . . 0 21 hm5C_associated_SNPs_481 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:76417736-76417814
64251 chr17 80559745 80559745 1 + C T rs112887170 80559745 + 80559725 80559765 41 GACGCGGGGGGAGCCATCCCCGCCGCCCTCACAGGACCCAC GACGCGGGGGGAGCCATCCCTGCCGCCCTCACAGGACCCAC Direct Loss 1 0.741579139584587 1 0.431165099143982 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FOXK2 ENSG00000141568 UTR3 Human protein_coding chr17:80559745 chr17:80559745 . . 0 21 hm5C_associated_SNPs_483 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:80559714-80559753
64251 chr17 80680760 80680760 1 + C A rs191683466 80680760 + 80680740 80680780 41 CGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGGCGTTTG CGTGCTGTGGATACCTCCCCAAGGTGAGTGCACGGCGTTTG Direct Loss 1 0.710676947061111 1 0.915212273597717 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680760 chr17:80680760 nonsynonymous SNV 0.996 2 21 hm5C_associated_SNPs_484 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80680730-80680765
64251 chr17 80887648 80887648 1 + C T rs112064048 80887648 + 80887628 80887668 41 TGGAGCTCCCAGCGTCCCCTCGGGGTTCAATCCTCCAGGAC TGGAGCTCCCAGCGTCCCCTTGGGGTTCAATCCTCCAGGAC Direct Loss 1 0.629485840118691 1 0.786803483963013 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBCD ENSG00000141556 intronic Human protein_coding chr17:80887648 chr17:80887648 . . 0 21 hm5C_associated_SNPs_485 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:80887545-80887670
64251 chr18 9862005 9862005 1 + C A rs145436140 9862005 + 9861985 9862025 41 TTGAATATGACGTTACCTTGCAGACTAAAAGGTTGAAGGCC TTGAATATGACGTTACCTTGAAGACTAAAAGGTTGAAGGCC Direct Loss 1 0.410396137968834 1 0.574708938598633 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9862005 chr18:9862005 . . 0 21 hm5C_associated_SNPs_486 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:9861973-9862007
64251 chr18 19209200 19209200 1 + C T rs142797517 19209200 + 19209180 19209220 41 AACATAAATGTGGGACAGAGCTGTCTATTTAGTATATCAAA AACATAAATGTGGGACAGAGTTGTCTATTTAGTATATCAAA Direct Loss 1 0.289695248765072 1 0.101199150085449 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPD1 ENSG00000167088 UTR3 Human protein_coding chr18:19209200 chr18:19209200 . . 0 21 hm5C_associated_SNPs_487 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:19209076-19209247
64251 chr18 20513350 20513350 1 + C A rs142828641 20513350 + 20513330 20513370 41 CCGCCTCCGAGCCCGGCCGGCAGCCCCCGGCCTTAAAGCGC CCGCCTCCGAGCCCGGCCGGAAGCCCCCGGCCTTAAAGCGC Direct Loss 1 0.511901770385887 1 0.186000555753708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513350 chr18:20513350 . . 0 21 hm5C_associated_SNPs_488 0 0 2 DDX3X POSTAR2 ENCODE chr18:20513309-20513362
64251 chr18 29671937 29671937 1 + C T rs183357442 29671937 + 29671917 29671957 41 GGCGCTCCCGCGTTCGGTGACGGCCGGGTAGGCTGTAGGCA GGCGCTCCCGCGTTCGGTGATGGCCGGGTAGGCTGTAGGCA Direct Loss 1 0.681470627241424 1 0.494588017463684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29671937 chr18:29671937 . . 0 21 hm5C_associated_SNPs_489 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr18:29671920-29671940
64251 chr18 72167184 72167184 1 + C A rs191869036 72167184 + 72167164 72167204 41 CTTCCAAGAACCTTCGAGATCTGCGGTCTGGGGTCTGGTTG CTTCCAAGAACCTTCGAGATATGCGGTCTGGGGTCTGGTTG Direct Loss 1 0.715941176641716 1 0.066752552986145 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNDP2 ENSG00000133313 UTR5 Human protein_coding chr18:72167184 chr18:72167184 . . 0 21 hm5C_associated_SNPs_490 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr18:72167180-72167200
64251 chr18 77730660 77730660 1 + C T rs116832047 77730660 + 77730640 77730680 41 AGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGA AGAAATCACACGGACCAGCATCTTGATCTGGGACTTCCAGA Direct Loss 1 0.198388575893005 1 0.0276939272880554 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730660 chr18:77730660 . . 0 21 hm5C_associated_SNPs_491 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77730646-77730684
64251 chr19 681756 681756 1 + C T rs371259653 681756 + 681736 681776 41 CCCGAGGCCCCCCATCATCCCCTGTTATTTATTGCCACAGC CCCGAGGCCCCCCATCATCCTCTGTTATTTATTGCCACAGC Direct Loss 1 0.14343916587548 1 0.0450257062911987 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FSTL3 ENSG00000070404 UTR3 Human protein_coding chr19:681756 chr19:681756 . 0.200 0 21 hm5C_associated_SNPs_492 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:681723-681758
64251 chr19 806451 806451 1 + C T rs11549887 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCTATCCCCTCGGCGGCGGCGGC Direct Loss 1 0.190843684345403 1 0.0939111709594727 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806451 synonymous SNV . 0 21 hm5C_associated_SNPs_493 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 808586 808586 1 + C G rs13169 808586 + 808566 808606 41 CACAAGCTGCACGGGAAGCCCATCCGCATCACGCTCTCGAA CACAAGCTGCACGGGAAGCCGATCCGCATCACGCTCTCGAA Direct Loss 1 0.2567665372914 1 0.284186631441116 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808586 chr19:808586 synonymous SNV . 0 21 hm5C_associated_SNPs_494 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:808575-808596
64251 chr19 1241781 1241781 1 + C A rs564285599 1241781 + 1241761 1241801 41 CGCGTCGTCCTCCTCGCCCTCCAGGCCGCCCGCGCCGCGCC CGCGTCGTCCTCCTCGCCCTACAGGCCGCCCGCGCCGCGCC Direct Loss 1 0.640726245035976 1 0.821639060974121 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5D ENSG00000099624 UTR5 Human protein_coding chr19:1241781 chr19:1241781 . . 0 21 hm5C_associated_SNPs_497 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:1241780-1241820
64251 chr19 1279105 1279105 1 + C T rs148703889 1279105 + 1279085 1279125 41 TGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACAT TGACTGTGACTTGTGCCTCTTTCCTGCCCCCGTGGGGACAT Direct Loss 1 0.674081195509323 1 0.0994003415107727 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1279105 chr19:1279105 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_498 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1279057-1279114
64251 chr19 1438865 1438865 1 + C T rs7251165 1438865 + 1438845 1438885 41 TTCACCTACCGCGGCGTGGACCTCGACCAGCTGCTGGACAT TTCACCTACCGCGGCGTGGATCTCGACCAGCTGCTGGACAT Direct Loss 1 0.227963776699503 1 0.12025848031044 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1438865 chr19:1438865 synonymous SNV . 0 21 hm5C_associated_SNPs_499 0 0 47 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:1438820-1438880
64251 chr19 4724141 4724141 1 + C T rs553016069 4724141 + 4724121 4724161 41 CAGTTGACCCGGGTTCGATTCCCGGCCAACGCATGCGGTAC CAGTTGACCCGGGTTCGATTTCCGGCCAACGCATGCGGTAC Direct Loss 1 0.462483091391181 1 0.646947085857391 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724141 chr19:4724141 . . 0 21 hm5C_associated_SNPs_503 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 5135388 5135388 1 + C T rs141692080 5135388 + 5135368 5135408 41 GAGGCACCCATAGCCTCCCTCGGAAAGGGCTGCCCGGCCAC GAGGCACCCATAGCCTCCCTTGGAAAGGGCTGCCCGGCCAC Direct Loss 1 0.677592608658294 1 0.94049209356308 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5135388 chr19:5135388 synonymous SNV . 0 21 hm5C_associated_SNPs_505 0 0 1 FXR2 POSTAR2 ENCODE chr19:5135367-5135447
64251 chr19 5690310 5690310 1 + C G rs568723208 5690310 + 5690290 5690330 41 TCCGCGCGGCGCCAGCCCTTCCGCCACGGCCGTCTCTGGAG TCCGCGCGGCGCCAGCCCTTGCGCCACGGCCGTCTCTGGAG Direct Loss 1 0.291587060189476 1 0.490275859832764 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690310 chr19:5690310 . . 0 21 hm5C_associated_SNPs_506 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:5690276-5690334
64251 chr19 5691641 5691641 1 + C G rs201621814 5691641 + 5691621 5691661 41 AAGAAAGACTGAGCCCCTCCCCTGCCCTCTCCCTGAAATAA AAGAAAGACTGAGCCCCTCCGCTGCCCTCTCCCTGAAATAA Direct Loss 1 0.097322161185057 1 0.232406228780746 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL36 ENSG00000130255 UTR3 Human protein_coding chr19:5691641 chr19:5691641 . . 0 21 hm5C_associated_SNPs_507 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691541-5691700
64251 chr19 7969347 7969347 1 + C G rs41284492 7969347 + 7969327 7969367 41 TCATCTCAGGGACTGTCTGGCGCCCCCCTCCCCCGGCCTGG TCATCTCAGGGACTGTCTGGGGCCCCCCTCCCCCGGCCTGG Direct Loss 1 0.128874686586175 1 0.539459824562073 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAP2K7 ENSG00000076984 intronic Human protein_coding chr19:7969347 chr19:7969347 . . 0 21 hm5C_associated_SNPs_508 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:7969328-7969361
64251 chr19 7979010 7979010 1 + C A rs183484324 7979010 + 7978990 7979030 41 TTGCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG TTGCATGGCTGGTCCCAGGGACAGCACAGGCCCGAGGCCGG Direct Loss 1 0.275462520627066 1 0.755140781402588 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7979010 chr19:7979010 . . 0 21 hm5C_associated_SNPs_509 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:7978976-7979013
64251 chr19 8478291 8478291 1 + C T rs530839730 8478291 + 8478271 8478311 41 GCCTGTGCGGCCGCCCGGCCCGGCCGCGGATCAGGTAGGCA GCCTGTGCGGCCGCCCGGCCTGGCCGCGGATCAGGTAGGCA Direct Loss 1 0.628161794122302 1 0.0370146036148071 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478291 chr19:8478291 . . 0 21 hm5C_associated_SNPs_510 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 10942324 10942324 1 + C T rs185820576 10942324 + 10942304 10942344 41 TAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTC TAGGCCCGGAGCCGTTGGCCTGGGCCGGCCTTGCCCTATTC Direct Loss 1 0.549533699216791 1 0.78659987449646 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942324 chr19:10942324 . . 0 21 hm5C_associated_SNPs_512 2 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10943338 10943338 1 - G A rs2075168 10943338 - 10943318 10943358 41 TGTGTTAGCGTTGCCTGGTGCGGGGCAGGGCCTAACAAGGA TGTGTTAGCGTTGCCTGGTGTGGGGCAGGGCCTAACAAGGA Direct Loss 1 0.884407184648702 1 0.732645273208618 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TMED1 ENSG00000099203 UTR3 Human protein_coding chr19:10943338 chr19:10943338 . . 0 21 hm5C_associated_SNPs_513 0 0 5 DDX55 POSTAR2 ENCODE chr19:10943324-10943405
64251 chr19 11032439 11032439 1 + C T rs576714524 11032439 + 11032419 11032459 41 CACTACGGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC CACTACGGGAGCTAGGGGCCTGCCCCGCGGACTGACAGCAC Direct Loss 1 0.336321963312254 1 0.1394402384758 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032439 chr19:11032439 . . 0 21 hm5C_associated_SNPs_514 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11032418-11032439
64251 chr19 11032501 11032501 1 + C T rs564514650 11032501 + 11032481 11032521 41 TGCCCGCCGCCCCCGCCGGGCGGCTTTCCCCCTTGTACTGG TGCCCGCCGCCCCCGCCGGGTGGCTTTCCCCCTTGTACTGG Direct Loss 1 0.331489797422866 1 0.152203559875488 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032501 chr19:11032501 . . 0 21 hm5C_associated_SNPs_515 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11032496-11032541
64251 chr19 11145691 11145691 1 + C T rs28997582 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGATGCGGAGGTGGAGCGGCTGAC Direct Loss 1 0.693944100888278 1 0.496320158243179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145691 synonymous SNV . 0 21 hm5C_associated_SNPs_516 2 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 13884586 13884586 1 + C G rs147089928 13884586 + 13884566 13884606 41 GGTTCAAGCGACTCTCCTGCCTCAGCCTCCCGAGTAGCTGG GGTTCAAGCGACTCTCCTGCGTCAGCCTCCCGAGTAGCTGG Direct Loss 1 0.621745974348695 1 0.707258999347687 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884586 chr19:13884586 . . 0 21 hm5C_associated_SNPs_519 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 18046000 18046000 1 + C T rs548714784 18046000 + 18045980 18046020 41 CAAAGCACGGGGATTACAAACGTGAGTGATCGCACCCGGCC CAAAGCACGGGGATTACAAATGTGAGTGATCGCACCCGGCC Direct Loss 1 0.666747888161842 1 0.322801947593689 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC124 ENSG00000007080 UTR5 Human protein_coding chr19:18046000 chr19:18046000 . . 0 21 hm5C_associated_SNPs_522 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:18045980-18046000
64251 chr19 18054643 18054643 1 + C T rs1052564 18054643 + 18054623 18054663 41 GGGGCCAAGGCGCCGGGCCCCGGGGCCATGCTCTTATCACC GGGGCCAAGGCGCCGGGCCCTGGGGCCATGCTCTTATCACC Direct Loss 1 0.94170957605203 1 0.79145622253418 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC124 ENSG00000007080 UTR3 Human protein_coding chr19:18054643 chr19:18054643 . . 0 21 hm5C_associated_SNPs_523 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18054609-18054794
64251 chr19 18530298 18530298 1 + C T rs539441578 18530298 + 18530278 18530318 41 AGCCGCCGCTGCCGCCGCCGCCGCGGCCGTCTGGAGCTCCC AGCCGCCGCTGCCGCCGCCGTCGCGGCCGTCTGGAGCTCCC Direct Loss 1 0.697347836964495 1 0.775048971176147 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSBP4 ENSG00000130511 UTR5 Human protein_coding chr19:18530298 chr19:18530298 . . 0 21 hm5C_associated_SNPs_524 0 0 10 BUD13 POSTAR2 ENCODE chr19:18530279-18530309
64251 chr19 18543841 18543841 1 + C T rs138143670 18543841 + 18543821 18543861 41 AACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG AACCCCATCGGGCAGGGCGCTGGCAGGGCTAATGTGAGTGG Direct Loss 1 0.680935107423486 1 0.400896549224854 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543841 chr19:18543841 synonymous SNV . 0 21 hm5C_associated_SNPs_525 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 24010071 24010071 1 + C A rs9305011 24010071 + 24010051 24010091 41 CTTGACTTCCAGATGGAACACTACATCTATAAAAGGAAAAG CTTGACTTCCAGATGGAACAATACATCTATAAAAGGAAAAG Direct Loss 1 0.650534954175006 1 0.367527484893799 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RPSAP58 ENSG00000205246 CDS Human other chr19:24010071 chr19:24010071 nonsynonymous SNV 0.957 0 21 hm5C_associated_SNPs_527 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:24010060-24010100
64251 chr19 33467675 33467675 1 + C T rs141881474 33467675 + 33467655 33467695 41 TAAAAACCAAGAGAATGGGCCGGGTGCACTGGCTCACGCCT TAAAAACCAAGAGAATGGGCTGGGTGCACTGGCTCACGCCT Direct Loss 1 0.68302426922088 1 0.431102573871613 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAAP24 ENSG00000131944 UTR3 Human protein_coding chr19:33467675 chr19:33467675 . . 0 21 hm5C_associated_SNPs_528 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:33467621-33467680
64251 chr19 34893009 34893009 1 + C T rs117782236 34893009 + 34892989 34893029 41 CAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTTTG CAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAAATTTTTG Direct Loss 1 0.14513098356535 1 0.160114467144012 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893009 chr19:34893009 . . 0 21 hm5C_associated_SNPs_530 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 38755406 38755406 1 + C G rs1046773 38755406 + 38755386 38755426 41 GGCTTTGGCACCTGGCGGACCCTCCCGGAGCGTCGGCACCT GGCTTTGGCACCTGGCGGACGCTCCCGGAGCGTCGGCACCT Direct Loss 1 0.167350156633926 1 0.0476471185684204 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPINT2 ENSG00000167642 UTR5 Human protein_coding chr19:38755406 chr19:38755406 . . 0 21 hm5C_associated_SNPs_531 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38755360-38755420
64251 chr19 39220561 39220561 1 + C T rs564893795 39220561 + 39220541 39220581 41 ACCCACCCAGCCCCTCTCCCCTCTCTGCTCCAGACTCACTT ACCCACCCAGCCCCTCTCCCTTCTCTGCTCCAGACTCACTT Direct Loss 1 0.195916293380281 1 0.0867173373699188 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 UTR3 Human protein_coding chr19:39220561 chr19:39220561 . . 0 21 hm5C_associated_SNPs_532 0 0 9 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr19:39220540-39220561
64251 chr19 39948371 39948371 1 + C T rs199661076 39948371 + 39948351 39948391 41 AGGATGGAGCAGAGGACATTCTAGAGAAAGGTGTGTGTGAG AGGATGGAGCAGAGGACATTTTAGAGAAAGGTGTGTGTGAG Direct Loss 1 0.869285692497708 1 0.611702442169189 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948371 chr19:39948371 synonymous SNV . 0 21 hm5C_associated_SNPs_534 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 46026006 46026006 1 + C T rs201980485 46026006 + 46025986 46026026 41 CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGA CCTCAGGGGGGCCCACAGCCTCCAAAGCTGAGAGTGGTCGA Direct Loss 1 0.604978321915237 1 0.700377702713013 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026006 chr19:46026006 nonsynonymous SNV 0.119 0 21 hm5C_associated_SNPs_536 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:46026006-46026007
64251 chr19 47506821 47506821 1 + C A rs139116656 47506821 + 47506801 47506841 41 TTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGC TTGTGTCGCATACTGGGTGTAACGGCACACATTTACTCTGC Direct Loss 1 0.791131717130958 1 0.100133299827576 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506821 chr19:47506821 . . 0 21 hm5C_associated_SNPs_537 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47506791-47506823
64251 chr19 48259063 48259063 1 + C T rs115908259 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GAGCTCGGAGCTGACAGACTTGCTCAGGACCCTGAAGGTGC Direct Loss 1 0.253183076019416 1 0.0371810495853424 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259063 nonsynonymous SNV 0.351 2 21 hm5C_associated_SNPs_538 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr19 48959021 48959021 1 + C T rs184790733 48959021 + 48959001 48959041 41 CAGCATTCCCCCTGGCACTGCGGGGGCCTGGCCAGCTCATG CAGCATTCCCCCTGGCACTGTGGGGGCCTGGCCAGCTCATG Direct Loss 1 0.841730600925249 1 0.922312676906586 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KCNJ14 ENSG00000182324;ENSG00000105447 UTR5;UTR3 Human other chr19:48959021 chr19:48959021 . . 0 21 hm5C_associated_SNPs_540 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:48958926-48959022
64251 chr19 49993254 49993254 1 + C G rs141468307 49993254 + 49993234 49993274 41 GAGCAACATTCACCATCTTTCGTTTGAGTCTCACGGCCATG GAGCAACATTCACCATCTTTGGTTTGAGTCTCACGGCCATG Direct Loss 1 0.106571808354034 1 0.0962155163288116 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993254 chr19:49993254 . . 0 21 hm5C_associated_SNPs_541 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49995430 49995430 1 + C A rs8113219 49995430 + 49995410 49995450 41 GTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGTACAC GTGCAAGCACTTGGGGACAGAATGAGCTTGCTGTTGTACAC Direct Loss 1 0.824918285144149 1 0.738929986953735 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995430 chr19:49995430 . . 0 21 hm5C_associated_SNPs_542 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 50029298 50029298 1 + C T rs34072018 50029298 + 50029278 50029318 41 TCCCTTCGTGGAGACGACACCGGGGTCCTCCTGCCCACCCC TCCCTTCGTGGAGACGACACTGGGGTCCTCCTGCCCACCCC Direct Loss 1 0.91924005619528 1 0.870201349258423 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FCGRT ENSG00000104870 CDS Human protein_coding chr19:50029298 chr19:50029298 synonymous SNV . 0 21 hm5C_associated_SNPs_543 0 0 4 BUD13 POSTAR2 ENCODE chr19:50029264-50029327
64251 chr19 50902141 50902141 1 + C A rs3218768 50902141 + 50902121 50902161 41 CGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC CGGCGGCCAGGCCCAGGGCCAGGGGTGCCCCCAAAGCGGGC Direct Loss 1 0.760198425310956 1 0.68913745880127 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902141 chr19:50902141 synonymous SNV . 0 21 hm5C_associated_SNPs_545 0 0 7 DDX3X POSTAR2 ENCODE chr19:50902104-50902184
64251 chr19 54041425 54041425 1 + C T rs578138012 54041425 + 54041405 54041445 41 GCGTGGGAGTACGAGGCTGACGCGGCGGCCCTGTCCCCGTA GCGTGGGAGTACGAGGCTGATGCGGCGGCCCTGTCCCCGTA Direct Loss 1 0.876243377857903 1 0.556704521179199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF331 ENSG00000130844 UTR5 Human protein_coding chr19:54041425 chr19:54041425 . . 0 21 hm5C_associated_SNPs_547 0 0 3 CSTF2T POSTAR2 ENCODE chr19:54041374-54041433
64251 chr19 55897302 55897302 1 + C G rs116572311 55897302 + 55897282 55897322 41 GCCTCGCCCCTCGCCTTCCTCTTTCCGTCTCAGGTCGCCGC GCCTCGCCCCTCGCCTTCCTGTTTCCGTCTCAGGTCGCCGC Direct Loss 1 0.0686782196150322 1 0.0438585579395294 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL28 ENSG00000108107 UTR5 Human protein_coding chr19:55897302 chr19:55897302 . . 0 21 hm5C_associated_SNPs_548 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:55897300-55897320
64251 chr19 58806365 58806365 1 + C T rs555389728 58806365 + 58806345 58806385 41 CACACCGAGGAGAGGCCCTACGAGTGTAACCACTGCGGGAA CACACCGAGGAGAGGCCCTATGAGTGTAACCACTGCGGGAA Direct Loss 1 0.708122737598603 1 0.195453822612762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58806365 chr19:58806365 synonymous SNV . 0 21 hm5C_associated_SNPs_549 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:58806359-58806383
64251 chr20 2124902 2124902 1 + C A rs150150776 2124902 + 2124882 2124922 41 GGGTTTCTTCTGGAACGGGGCGTGAGGACACAAGGAGGCCT GGGTTTCTTCTGGAACGGGGAGTGAGGACACAAGGAGGCCT Direct Loss 1 0.524912784552062 1 0.511725962162018 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2124902 chr20:2124902 . . 0 21 hm5C_associated_SNPs_550 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:2124851-2124918
64251 chr20 2635157 2635157 1 + C T rs144743768 2635157 + 2635137 2635177 41 GGGGATCCCAAGATTGGTGCCGCAATACAGGAGGAGTTAGG GGGGATCCCAAGATTGGTGCTGCAATACAGGAGGAGTTAGG Direct Loss 1 0.574421798164884 1 0.298829823732376 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635157 chr20:2635157 synonymous SNV . 0 21 hm5C_associated_SNPs_551 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr20 33764041 33764041 1 + C T rs186899359 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTCTTTGAAGTGGCTGTGAATGGGAG Direct Loss 1 0.694977484655222 1 0.7725590467453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764041 synonymous SNV . 0 21 hm5C_associated_SNPs_554 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr20 35220993 35220993 1 + C T rs556678847 35220993 + 35220973 35221013 41 AGCTTTTCCCACAATGGTGGCAGGAAACTTTGGGGAAAGCA AGCTTTTCCCACAATGGTGGTAGGAAACTTTGGGGAAAGCA Direct Loss 1 0.609380771146126 1 0.564890742301941 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220993 chr20:35220993 . . 0 21 hm5C_associated_SNPs_555 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:35220968-35220996
64251 chr20 44513048 44513048 1 + C T rs150692129 44513048 + 44513028 44513068 41 GTCTGTCTCCGTCACCCAGGCTGGAGTGCAGTGGCGCAATC GTCTGTCTCCGTCACCCAGGTTGGAGTGCAGTGGCGCAATC Direct Loss 1 0.905005733949758 1 0.301493525505066 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513048 chr20:44513048 . . 0 21 hm5C_associated_SNPs_557 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513028-44513053
64251 chr20 47895559 47895559 1 + C T rs140365533 47895559 + 47895539 47895579 41 TTTGCCAGTTAGTTCTGATACATCGGCCTCAAAAGGCCCGG TTTGCCAGTTAGTTCTGATATATCGGCCTCAAAAGGCCCGG Direct Loss 1 0.507605763573959 1 0.0785832107067108 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895559 chr20:47895559 . . 0 21 hm5C_associated_SNPs_558 0 0 10 FBL POSTAR2 GSE43666,GSM1067864 chr20:47895470-47895562
64251 chr20 57466771 57466771 1 + C A rs571673520 57466771 + 57466751 57466791 41 CCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTGCC CCGGCCGCGCCCCGCCGCCGACGCCGCCGCCATGGGCTGCC Direct Loss 1 0.334306785283677 1 0.127542287111282 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAS ENSG00000087460 UTR5 Human protein_coding chr20:57466771 chr20:57466771 . . 0 21 hm5C_associated_SNPs_559 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 60882762 60882762 1 + C A rs200789814 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAACTAGCCCGAGCCCCGAGCCCAGTTCCGGGAATGGAG Direct Loss 1 0.297202703278086 1 0.438124567270279 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882762 nonsynonymous SNV 0.194 1 21 hm5C_associated_SNPs_560 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 62566991 62566991 1 + C A rs3810500 62566991 + 62566971 62567011 41 CCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACA CCCTGTGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACACA Direct Loss 1 0.320504801074058 1 0.175285220146179 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566991 chr20:62566991 . . 0 21 hm5C_associated_SNPs_561 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62567038 62567038 1 + C T rs11554630 62567038 + 62567018 62567058 41 CCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCACC CCTCCAGAAGGGGCTGGGCCTGGGGTCCTGCAGGCGGCACC Direct Loss 1 0.88244822464344 1 0.880392968654633 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567038 chr20:62567038 . . 0 21 hm5C_associated_SNPs_562 1 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:62567024-62567047
64251 chr20 62587762 62587762 1 - G T rs142269879 62587762 - 62587742 62587782 41 CTCCCGGCGGCCCATGCGCGCCGCCCGGCCAGGCCCGCAAA CTCCCGGCGGCCCATGCGCGACGCCCGGCCAGGCCCGCAAA Direct Loss 1 0.442054655322329 1 0.172123283147812 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UCKL1-AS1 ENSG00000198276 UTR5 Human protein_coding chr20:62587762 chr20:62587762 . . 0 21 hm5C_associated_SNPs_563 0 0 1 NCBP2 POSTAR2 ENCODE chr20:62587716-62587766
64251 chr21 9825935 9825935 1 + C T rs547209479 9825935 + 9825915 9825955 41 GGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCG GGCGGCGGTGAGGCCCCGCGTGTGTGTCCCGGCTGCGGTCG Direct Loss 1 0.636644051490671 1 0.13107967376709 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825935 chr21:9825935 . . 0 21 hm5C_associated_SNPs_564 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825985 9825985 1 + C G rs550039611 9825985 + 9825965 9826005 41 GAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTT GAGGGGTCCCCGTGGCGTCCGCTTCCCCGCCGGCCGCCTTT Direct Loss 1 0.0546321032225419 1 0.0573076903820038 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825985 chr21:9825985 . . 0 21 hm5C_associated_SNPs_565 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825999 + 9825979 9826019 41 GCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGCGCCTTCCCC GCGTCCCCTTCCCCGCCGGCAGCCTTTCTCGCGCCTTCCCC Direct Loss 1 0.385008517795093 1 0.147733062505722 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825999 chr21:9825999 . . 0 21 hm5C_associated_SNPs_566 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 35474950 35474950 1 + C T rs563671687 35474950 + 35474930 35474970 41 AATTTGGTTACCTGGGTTCACAGCTTGCTTGAAGAGAAAGG AATTTGGTTACCTGGGTTCATAGCTTGCTTGAAGAGAAAGG Direct Loss 1 0.405619702878176 1 0.408961862325668 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC5A3 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35474950 chr21:35474950 . . 0 21 hm5C_associated_SNPs_567 0 0 10 MOV10 POSTAR2 GSE37524,GSM921128 chr21:35474847-35474973
64251 chr21 38568183 38568183 1 + C T rs147100615 38568183 + 38568163 38568203 41 CTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTG CTCAGCTGACAGGGCCAAAATGGGCTGGCCAGGCAGCTCTG Direct Loss 1 0.838896509247163 1 0.862615287303925 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38568183 chr21:38568183 nonsynonymous SNV 0.000 2 21 hm5C_associated_SNPs_568 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr21:38568139-38568194
64251 chr21 44001185 44001185 1 + C T rs117081037 44001185 + 44001165 44001205 41 AAGTCACCGTCATCCCAGCCCCTGGCCTTCCTGCTGCCCTC AAGTCACCGTCATCCCAGCCTCTGGCCTTCCTGCTGCCCTC Direct Loss 1 0.284992397850232 1 0.132696539163589 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC37A1 ENSG00000160190 UTR3 Human protein_coding chr21:44001185 chr21:44001185 . . 0 21 hm5C_associated_SNPs_569 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr21:44001165-44001197
64251 chr22 17590500 17590500 1 + C T rs575142705 17590500 + 17590480 17590520 41 CAGTCTGACCAGGGCTACATCTCCAGGAGCTCCCCGCAGCC CAGTCTGACCAGGGCTACATTTCCAGGAGCTCCCCGCAGCC Direct Loss 1 0.83038331905583 1 0.919163823127747 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control IL17RA ENSG00000177663 CDS Human protein_coding chr22:17590500 chr22:17590500 synonymous SNV . 0 21 hm5C_associated_SNPs_571 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:17590482-17590526
64251 chr22 21213632 21213632 1 + C G rs144160898 21213632 + 21213612 21213652 41 AAGGTTGGGGTCGCCTCTTCCGAGGTGAGCCTGGGGCAGGG AAGGTTGGGGTCGCCTCTTCGGAGGTGAGCCTGGGGCAGGG Direct Loss 1 0.942782888822422 1 0.949777185916901 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21213632 chr22:21213632 synonymous SNV . 0 21 hm5C_associated_SNPs_575 1 0 5 BUD13 POSTAR2 ENCODE chr22:21213598-21213672
64251 chr22 21306194 21306194 1 + C T rs189274432 21306194 + 21306174 21306214 41 TTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGTC TTGCCAGTGAGAACGGTGACTGCCTCCTGCTCTGCACGGTC Direct Loss 1 0.513943407967092 1 0.106172651052475 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21306194 chr22:21306194 . . 0 21 hm5C_associated_SNPs_576 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:21306161-21306296
64251 chr22 21996599 21996599 1 + C T rs367932168 21996599 + 21996579 21996619 41 GACGGAAGCGGCCCCTGGGCCCGAGGGGCTGGAGCCGGGCC GACGGAAGCGGCCCCTGGGCTCGAGGGGCTGGAGCCGGGCC Direct Loss 1 0.715573557377324 1 0.873039960861206 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDF2L1 ENSG00000128228 UTR5 Human protein_coding chr22:21996599 chr22:21996599 . . 0 21 hm5C_associated_SNPs_577 0 0 1 DDX3X POSTAR2 ENCODE chr22:21996596-21996615
64251 chr22 22050296 22050296 1 + C A rs140258718 22050296 + 22050276 22050316 41 GTATATGTCTGGTTTTCTTACCCCTACTTCTGTCATCTTCT GTATATGTCTGGTTTTCTTAACCCTACTTCTGTCATCTTCT Direct Loss 1 0.0818385370642384 1 0.280943095684052 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22050296 chr22:22050296 . . 0 21 hm5C_associated_SNPs_578 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:22050258-22050314
64251 chr22 23523630 23523630 1 + C A rs5751602 23523630 + 23523610 23523650 41 AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC AGGTCCAACTTCGAGCGGATACGCAAGGGCCATGGCCAGCC Direct Loss 1 0.569843671320763 1 0.0471875667572021 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23523630 chr22:23523630 synonymous SNV . 0 21 hm5C_associated_SNPs_579 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:23523629-23523630
64251 chr22 26880006 26880006 1 + C T rs371251054 26880006 + 26879986 26880026 41 AGAGAGGCGGCGCCCCGGGGCCCCGAGGCGGAGTTCGAGTC AGAGAGGCGGCGCCCCGGGGTCCCGAGGCGGAGTTCGAGTC Direct Loss 1 0.570042471837925 1 0.412420451641083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRD ENSG00000100104 CDS Human protein_coding chr22:26880006 chr22:26880006 synonymous SNV . 0 21 hm5C_associated_SNPs_580 0 0 1 DDX3X POSTAR2 ENCODE chr22:26879989-26880045
64251 chr22 37965214 37965214 1 + C T rs545907231 37965214 + 37965194 37965234 41 GTCTCACCTCCCAAAGGGACCGCCTGCCCCCAGCTCATCCC GTCTCACCTCCCAAAGGGACTGCCTGCCCCCAGCTCATCCC Direct Loss 1 0.459877139845816 1 0.048258900642395 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC42EP1 ENSG00000128283 UTR3 Human protein_coding chr22:37965214 chr22:37965214 . . 0 21 hm5C_associated_SNPs_584 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:37965194-37965248
64251 chr22 38013172 38013172 1 + C T rs3817997 38013172 + 38013152 38013192 41 AAGGGTCCCACCACAGCCAGCGGGCTGGCCTCCCACCCCAG AAGGGTCCCACCACAGCCAGTGGGCTGGCCTCCCACCCCAG Direct Loss 1 0.340137435806295 1 0.915487289428711 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GGA1 ENSG00000100083 UTR3 Human protein_coding chr22:38013172 chr22:38013172 . . 0 21 hm5C_associated_SNPs_585 0 0 2 HNRNPK POSTAR2 ENCODE chr22:38013118-38013205
64251 chrX 1720158 1720158 1 + C T rs137976911 1720158 + 1720138 1720178 41 ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGGAGAC ACCGGGAGCCCAGCAAGGGCTGGGGCCGGGCCACCGGAGAC Direct Loss 1 0.804164451249545 1 0.804490506649017 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1720158 chrX:1720158 nonsynonymous SNV 0.002 3 21 hm5C_associated_SNPs_589 0 0 1 EIF3H POSTAR2 ENCODE chrX:1720146-1720248
64251 chrX 47431033 47431033 1 + C T rs112568375 47431033 + 47431013 47431053 41 TTCTGGAATTGGGGGACCCCCGCCAAAGACTGAGCCCCCTG TTCTGGAATTGGGGGACCCCTGCCAAAGACTGAGCCCCCTG Direct Loss 1 0.95075248520677 1 0.907622098922729 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47431033 chrX:47431033 . . 0 21 hm5C_associated_SNPs_590 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:47430984-47431034
64251 chrX 73043297 73043297 1 - G A rs138595829 73043297 - 73043277 73043317 41 GAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAAGA GAGATGAGGGCATTAGATCATTGACAGCTGAAGATAGAAGA Direct Loss 1 0.123979758346515 1 0.128601223230362 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043297 chrX:73043297 . . 0 21 hm5C_associated_SNPs_593 0 0 65 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73045745 73045745 1 - G A rs41303699 73045745 - 73045725 73045765 41 GAGAACCTGGGACTGTTGAGCATGTTTAATACTTTCCTTGA GAGAACCTGGGACTGTTGAGTATGTTTAATACTTTCCTTGA Direct Loss 1 0.149718632857912 1 0.524456679821014 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045745 chrX:73045745 . . 0 21 hm5C_associated_SNPs_594 0 0 95 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73047076 73047076 1 - G A rs187945496 73047076 - 73047056 73047096 41 CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA CCTGCCTGATAGGTGCAGAATGTCGGCTATCAGAGCAAGCA Direct Loss 1 0.283043605713903 1 0.153151333332062 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047076 chrX:73047076 . . 0 21 hm5C_associated_SNPs_595 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chrX 153658754 153658754 1 + C T rs59887267 153658754 + 153658734 153658774 41 GGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGGGGG GGATTACAGGCGTGAGCCACTGCGCCCGGCCTGTGAGGGGG Direct Loss 1 0.587651939188833 1 0.72750049829483 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658754 chrX:153658754 . . 0 21 hm5C_associated_SNPs_596 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chr3 49050657 49050657 1 + C A ACC 49050657 + 49050637 49050677 41 TGGGCCCAGTGTCTACCCTGCCCTCTCTGCACGGGAAGCAG TGGGCCCAGTGTCTACCCTGACCTCTCTGCACGGGAAGCAG Direct Loss 1 0.0320060234824432 1 0.0104519724845886 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050657 chr3:49050657 nonsynonymous SNV 0.504 0 21 hm5C_associated_SNPs_597 0 0 34 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49050600-49050660
64251 chr5 73981246 73981246 1 + C T ACC 73981246 + 73981226 73981266 41 CGTCTCGGCCAAGCCGGGGCCGGCGCTGTGGCCCCTGCCGC CGTCTCGGCCAAGCCGGGGCTGGCGCTGTGGCCCCTGCCGC Direct Loss 1 0.882419374756571 1 0.701995968818665 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981246 chr5:73981246 nonsynonymous SNV 0.070 1 21 hm5C_associated_SNPs_598 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:73981244-73981274
64251 chrX 53112257 53112257 1 + C T ACC 53112257 + 53112237 53112277 41 GCAGGAGGCGGCGGCGGCGGCGGAGGAGGAAGCAGAGGAAG GCAGGAGGCGGCGGCGGCGGTGGAGGAGGAAGCAGAGGAAG Direct Loss 1 0.885569040435004 1 0.933926105499268 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53112257 chrX:53112257 nonsynonymous SNV 0.613 2 21 hm5C_associated_SNPs_599 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chrX:53112257-53112278
64251 chr12 56663999 56663999 1 + C G BLCA 56663999 + 56663979 56664019 41 ATGTTTTTTGATGAGGTTGTCAAACAGAATGTTGCTGCCTT ATGTTTTTTGATGAGGTTGTGAAACAGAATGTTGCTGCCTT Direct Loss 1 0.366801351723325 1 0.742384910583496 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ10A ENSG00000135469 CDS Human protein_coding chr12:56663999 chr12:56663999 synonymous SNV . 0 21 hm5C_associated_SNPs_602 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56663961-56664000
64251 chr11 68363567 68363567 1 + C T BLCA 68363567 + 68363547 68363587 41 GGTCTTGTTTTTCCTTAGCTCGGGGAGTACAGACAGTGAGG GGTCTTGTTTTTCCTTAGCTTGGGGAGTACAGACAGTGAGG Direct Loss 1 0.769758576395019 1 0.767065525054932 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363567 chr11:68363567 nonsynonymous SNV 0.938 3 21 hm5C_associated_SNPs_603 0 0 2 GPKOW POSTAR2 ENCODE chr11:68363549-68363598
64251 chr8 104452461 104452461 1 + C T BLCA 104452461 + 104452441 104452481 41 GATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAATGCT GATCTGATGAAATGAACATTTGCCTGTGGAAAGCTAATGCT Direct Loss 1 0.755856413301478 1 0.243362277746201 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452461 chr8:104452461 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_604 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104452376-104452483
64251 chr2 32724730 32724730 1 + C T BLCA 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAGAATTGGTTACATTTTTAGTGCACC Direct Loss 1 0.046747133964247 1 0.14025291800499 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724730 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_605 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr4 154245282 154245282 1 + C T BLCA 154245282 + 154245262 154245302 41 GAGATTATTATTACAGATTTCCATAATCATTCTGTCAAGGT GAGATTATTATTACAGATTTTCATAATCATTCTGTCAAGGT Direct Loss 1 0.091139445229947 1 0.0619006752967834 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154245282 chr4:154245282 synonymous SNV . 0 21 hm5C_associated_SNPs_606 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:154245267-154245295
64251 chr1 65895720 65895720 1 + C A BLCA 65895720 + 65895700 65895740 41 GATTTCCTGTTATTCTTGCTCGTGTGGCTGTGGTAAGTTTT GATTTCCTGTTATTCTTGCTAGTGTGGCTGTGGTAAGTTTT Direct Loss 1 0.206155362673132 1 0.110314518213272 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LEPROT ENSG00000213625 CDS Human protein_coding chr1:65895720 chr1:65895720 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_608 0 0 1 SND1 POSTAR2 ENCODE chr1:65895670-65895732
64251 chr5 179151700 179151700 1 + C T BLCA 179151700 + 179151680 179151720 41 ATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAG ATAAGAAAACTGATGCACCTTAACCGGATGTGAAGGAAGAG Direct Loss 1 0.260353616566081 1 0.163715273141861 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151700 chr5:179151700 stopgain 0.955 1 21 hm5C_associated_SNPs_609 0 0 58 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr14 21556227 21556227 1 + C T BLCA 21556227 + 21556207 21556247 41 AGCAGCACTCCCACCCTGGCCAGTCGAGGGATCTTAGGGCT AGCAGCACTCCCACCCTGGCTAGTCGAGGGATCTTAGGGCT Direct Loss 1 0.232181955564592 1 0.176854401826859 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21556227 chr14:21556227 synonymous SNV . 0 21 hm5C_associated_SNPs_610 0 0 1 PPIG POSTAR2 ENCODE chr14:21556149-21556251
64251 chr3 12616427 12616427 1 + C G BLCA 12616427 + 12616407 12616447 41 GAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACT GAGGAGATTTGGGATTCTCTGCAATTGCAATCACACGTACT Direct Loss 1 0.270655435479757 1 0.0773715674877167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12616427 chr3:12616427 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_613 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:12616410-12616433
64251 chr3 33877665 33877665 1 + C T BLCA 33877665 + 33877645 33877685 41 ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT ATGACTTCATTTATCATGATTGAGTTCCAGACCTTAAAGAT Direct Loss 1 0.443738502292443 1 0.202501654624939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877665 chr3:33877665 stopgain 0.998 1 21 hm5C_associated_SNPs_614 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33877640-33877700
64251 chr22 42042976 42042976 1 + C T BLCA 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAAGCCTTCTCCAATAAAGCTCTATCGG Direct Loss 1 0.101442585814528 1 0.255320876836777 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042976 nonsynonymous SNV 0.227 0 21 hm5C_associated_SNPs_615 0 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr22:42042960-42042980
64251 chr11 67052451 67052451 1 + C T BLCA 67052451 + 67052431 67052471 41 TGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG TGGCGGGGCGAGGGCGAGGCTCCGGTAAGGAGCCCGTGCGG Direct Loss 1 0.696771817243929 1 0.878458499908447 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052451 chr11:67052451 synonymous SNV . 0 21 hm5C_associated_SNPs_616 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr9 131198051 131198051 1 + C A BLCA 131198051 + 131198031 131198071 41 GCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACA GCTCAGTGACACGGAGACATACTCTCCATGGGATGATGACA Direct Loss 1 0.0457124640484177 1 0.026031881570816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198051 chr9:131198051 nonsynonymous SNV 0.986 5 21 hm5C_associated_SNPs_617 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr19 56172438 56172438 1 + C T BLCA 56172438 + 56172418 56172458 41 CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT CCAGCCACTGCTCTTCTCCCTACCATGACCCCTGACGGTCT Direct Loss 1 0.710768437742999 1 0.343556970357895 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172438 chr19:56172438 synonymous SNV . 0 21 hm5C_associated_SNPs_620 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr7 100151721 100151721 1 + C T BLCA 100151721 + 100151701 100151741 41 TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGGAC TCCTTCTCCTCCAAGCCCGTTAGTCAGTCTCACGCTCGGAC Direct Loss 1 0.0446107754694731 1 0.0459512174129486 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100151721 chr7:100151721 synonymous SNV . 0 21 hm5C_associated_SNPs_622 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100151718-100151749
64251 chr19 5691353 5691353 1 + C T BLCA 5691353 + 5691333 5691373 41 CTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGA CTGACCAAACACACCAAGTTTGTGCGGGACATGATTCGGGA Direct Loss 1 0.386575467004971 1 0.354442119598389 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691353 chr19:5691353 synonymous SNV . 0 21 hm5C_associated_SNPs_627 0 0 65 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5691320-5691360
64251 chr10 17276805 17276805 1 + C T BLCA 17276805 + 17276785 17276825 41 CTCACCTGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC CTCACCTGTGAAGTGGATGCTCTTAAAGGAACCGTGAGTAC Direct Loss 1 0.144240837195063 1 0.0690104067325592 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276805 chr10:17276805 synonymous SNV . 0 21 hm5C_associated_SNPs_628 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr3 141163632 141163632 1 + C T BLCA 141163632 + 141163612 141163652 41 TGTTGCTGATCCTGGAGGATCACTGAGCAAAACCACAAATA TGTTGCTGATCCTGGAGGATTACTGAGCAAAACCACAAATA Direct Loss 1 0.377021215816604 1 0.204301863908768 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141163632 chr3:141163632 nonsynonymous SNV 0.090 2 21 hm5C_associated_SNPs_630 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141163620-141163641
64251 chr14 39649941 39649941 1 + C T BLCA 39649941 + 39649921 39649961 41 GGAAGAGGAAAAGGAAATAGCGATTGTTCATAGTGATGCAG GGAAGAGGAAAAGGAAATAGTGATTGTTCATAGTGATGCAG Direct Loss 1 0.440959973464737 1 0.139259546995163 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649941 chr14:39649941 nonsynonymous SNV 0.914 1 21 hm5C_associated_SNPs_631 0 0 48 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr14:39649940-39649960
64251 chrX 54838641 54838641 1 + C G BLCA 54838641 + 54838621 54838661 41 AGAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCC AGAATGACCACTTGTACATTGTTCTCAGCACCTTAGAGCCC Direct Loss 1 0.130201936843897 1 0.049378901720047 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54838641 chrX:54838641 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_632 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:54838637-54838680
64251 chr6 53785428 53785428 1 + C G BLCA 53785428 + 53785408 53785448 41 TCTTTGTCACTGCAGAGAATCTGCCTCGCTGTGGTGCACTG TCTTTGTCACTGCAGAGAATGTGCCTCGCTGTGGTGCACTG Direct Loss 1 0.485919237209733 1 0.274250209331512 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53785428 chr6:53785428 nonsynonymous SNV 0.975 1 21 hm5C_associated_SNPs_633 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:53785424-53785444
64251 chr6 7579653 7579653 1 + C T BLCA 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGTTCAAAGCGAAGCTTGTGAGCCTGGAGGAGCTGAAGA Direct Loss 1 0.2977417217264 1 0.220585465431213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579653 nonsynonymous SNV 0.781 0 21 hm5C_associated_SNPs_634 0 0 8 AGGF1 POSTAR2 ENCODE chr6:7579586-7579689
64251 chr15 45003787 45003787 1 + C G BLCA 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTCGCGCTACTCTCTGTTTCTGGCCTGGAGGCTATC Direct Loss 1 0.136605723735081 1 0.0265350639820099 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003787 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_635 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr16 28847774 28847774 1 + C T BLCA 28847774 + 28847754 28847794 41 CCCACTGCCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCT CCCACTGCCTCCCCAGCTCTTAGTGACCCCGACTGTCTCCT Direct Loss 1 0.61523376295885 1 0.189369976520538 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847774 chr16:28847774 synonymous SNV . 0 21 hm5C_associated_SNPs_638 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chrX 123190075 123190075 1 + C T BLCA 123190075 + 123190055 123190095 41 CAGTAGCAGCTGGAGAATTTCTCTACAAAAAGTAAATCTAT CAGTAGCAGCTGGAGAATTTTTCTACAAAAAGTAAATCTAT Direct Loss 1 0.522144974906534 1 0.782246828079224 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123190075 chrX:123190075 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_640 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:123190060-123190086
64251 chr6 7581110 7581110 1 + C G BLCA 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTCCAGAACTCTGTGAAAGAGCTGCAGCTGCAG Direct Loss 1 0.773671292059938 1 0.502413690090179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581110 nonsynonymous SNV 0.936 0 21 hm5C_associated_SNPs_642 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr1 984698 984698 1 + C T BLCA 984698 + 984678 984718 41 GGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACC GGCACCGCCTGGAGCTGTCCTGGCACTGGCGCCGGGGCACC Direct Loss 1 0.760720503482379 1 0.503324925899506 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984698 chr1:984698 nonsynonymous SNV 0.140 4 21 hm5C_associated_SNPs_643 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr20 30898670 30898670 1 + C T BLCA 30898670 + 30898650 30898690 41 AATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA AATTCCAGGAAGAGATTGCTTGGCTCAAGGCCCAGCTGGAA Direct Loss 1 0.63775395426162 1 0.421742856502533 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898670 chr20:30898670 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_645 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:30898663-30898687
64251 chr7 44804952 44804952 1 + C T BLCA 44804952 + 44804932 44804972 41 AGCTCTGACTATGAGGAGATCACCATCGACCCCACGTGCAG AGCTCTGACTATGAGGAGATTACCATCGACCCCACGTGCAG Direct Loss 1 0.660421469834708 1 0.0604217052459717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44804952 chr7:44804952 synonymous SNV . 0 21 hm5C_associated_SNPs_646 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:44804941-44804964
64251 chr9 91930099 91930099 1 + C T BLCA 91930099 + 91930079 91930119 41 TAACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAG TAACAGGCATGTTATGTTACTCAGAGAACTTTCCAAACAAG Direct Loss 1 0.624333881490736 1 0.207047134637833 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930099 chr9:91930099 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_647 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930080-91930100
64251 chr17 28788910 28788910 1 + C T BLCA 28788910 + 28788890 28788930 41 TTCAGGTTCACAAGGGAGTTCATGGATTTGTTAAAGATAAG TTCAGGTTCACAAGGGAGTTTATGGATTTGTTAAAGATAAG Direct Loss 1 0.13986062953038 1 0.227298885583878 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28788910 chr17:28788910 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_648 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28788894-28788925
64251 chr6 26204978 26204978 1 + C T BLCA 26204978 + 26204958 26204998 41 GCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGGG GCATTACCAAGCCTGCCATCTGGCGCCTTGCTCGTCGCGGG Direct Loss 1 0.854459975298642 1 0.895605802536011 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204978 chr6:26204978 nonsynonymous SNV 0.019 0 21 hm5C_associated_SNPs_650 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr10 101515429 101515429 1 + C G BLCA 101515429 + 101515409 101515449 41 ACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGTGA ACTTTCTTGCTCAGAATATTGCCTAAAGGTAACAGATGTGA Direct Loss 1 0.430445441462326 1 0.202685803174973 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUTC ENSG00000119929 CDS Human protein_coding chr10:101515429 chr10:101515429 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_652 0 0 16 FUS POSTAR2 DRA001158,DRS012384 chr10:101515395-101515443
64251 chr19 17450306 17450306 1 + C T BLCA 17450306 + 17450286 17450326 41 CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC CCGTGACGTGCTGGAGACCCTAGTCGACCTGGCCGGATTTC Direct Loss 1 0.33644975632349 1 0.86938601732254 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450306 chr19:17450306 nonsynonymous SNV 0.911 0 21 hm5C_associated_SNPs_653 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:17450272-17450308
64251 chr5 132427046 132427046 1 + C T BLCA 132427046 + 132427026 132427066 41 AGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGGAAGAG AGGAGCCAATGGAAACAGATTAGAATGCAAAGGAGGAAGAG Direct Loss 1 0.72768500114028 1 0.259987473487854 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427046 chr5:132427046 stopgain 0.999 1 21 hm5C_associated_SNPs_654 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr6 44219877 44219877 1 + C G BLCA 44219877 + 44219857 44219897 41 TGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGG TGATGGGAAGAGCCTGGTCTGAGTTACCAAGGAGGGTCTGG Direct Loss 1 0.452669788281929 1 0.0803154110908508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219877 chr6:44219877 stopgain 0.994 0 21 hm5C_associated_SNPs_657 0 0 50 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr3 179371085 179371085 1 + C T BLCA 179371085 + 179371065 179371105 41 AAGATGGCTGCAGGAGACATCGGCGAGCTGCTAGTGCCCCA AAGATGGCTGCAGGAGACATTGGCGAGCTGCTAGTGCCCCA Direct Loss 1 0.900659777803513 1 0.862323820590973 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179371085 chr3:179371085 synonymous SNV . 0 21 hm5C_associated_SNPs_658 0 0 1 EIF3D POSTAR2 ENCODE chr3:179370996-179371089
64251 chr3 33906752 33906752 1 + C T BLCA 33906752 + 33906732 33906772 41 TAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACC TAGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCCACCACC Direct Loss 1 0.20613542127568 1 0.708511829376221 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906752 chr3:33906752 synonymous SNV . 0 21 hm5C_associated_SNPs_659 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr1 214819612 214819612 1 + C G BLCA 214819612 + 214819592 214819632 41 TCAGAACTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT TCAGAACTAGACAAGTTACTGTCTTCATTTAAAAGTCTGTT Direct Loss 1 0.066151553549071 1 0.0374311506748199 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819612 chr1:214819612 synonymous SNV . 0 21 hm5C_associated_SNPs_660 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819574-214819648
64251 chr2 173352763 173352763 1 + C T BLCA 173352763 + 173352743 173352783 41 TGAACTGCTTTTATCGGTCTCGGGGTAAGTGTTTGTGTTTA TGAACTGCTTTTATCGGTCTTGGGGTAAGTGTTTGTGTTTA Direct Loss 1 0.675580265497902 1 0.792828679084778 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173352763 chr2:173352763 nonsynonymous SNV 0.952 1 21 hm5C_associated_SNPs_661 0 0 1 PRPF8 POSTAR2 ENCODE chr2:173352743-173352800
64251 chr8 145697780 145697780 1 + C G BLCA 145697780 + 145697760 145697800 41 GGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG GGGCCTCCCGAGCGCCTGGCGGTGAGGCAGGGCCCAGAAGG Direct Loss 1 0.72062153851888 1 0.786895573139191 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145697780 chr8:145697780 synonymous SNV . 0 21 hm5C_associated_SNPs_662 0 0 4 LSM11 POSTAR2 ENCODE chr8:145697742-145697786
64251 chr1 46073334 46073334 1 + C A BLCA 46073334 + 46073314 46073354 41 CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCAGAGAAAAA CAGTTTCTGGAACTGATGTCAAAGAAGAGTGCAGAGAAAAA Direct Loss 1 0.627942471212821 1 0.761536955833435 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073334 chr1:46073334 nonsynonymous SNV 0.005 2 21 hm5C_associated_SNPs_663 0 0 10 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:46073320-46073340
64251 chr1 153724860 153724860 1 + C T BLCA 153724860 + 153724840 153724880 41 AAGATATTATCCATAATCCTCAGGCCTTGAGTCCTCAGTTC AAGATATTATCCATAATCCTTAGGCCTTGAGTCCTCAGTTC Direct Loss 1 0.605933136244618 1 0.77608323097229 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout INTS3 ENSG00000143624 CDS Human protein_coding chr1:153724860 chr1:153724860 stopgain 1.000 1 21 hm5C_associated_SNPs_664 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153724842-153724868
64251 chr1 39898725 39898725 1 + C G BLCA 39898725 + 39898705 39898745 41 GTTTACTTTTCAAAGGCTTTCTCCATTGACATTATTCGACA GTTTACTTTTCAAAGGCTTTGTCCATTGACATTATTCGACA Direct Loss 1 0.232302532985352 1 0.889979004859924 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39898725 chr1:39898725 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_665 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:39898716-39898742
64251 chr16 89628100 89628100 1 + C T BLCA 89628100 + 89628080 89628120 41 TGCAGCGGCTGAAGGAGTACCGCTCCAAACTCATCCTCTTC TGCAGCGGCTGAAGGAGTACTGCTCCAAACTCATCCTCTTC Direct Loss 1 0.229072575842291 1 0.431117415428162 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89628100 chr16:89628100 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_666 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89628018-89628126
64251 chr11 69462886 69462886 1 + C T BLCA 69462886 + 69462866 69462906 41 TACCGCCTCACACGCTTCCTCTCCAGAGTGATCAAGTGTGA TACCGCCTCACACGCTTCCTTTCCAGAGTGATCAAGTGTGA Direct Loss 1 0.821132617990612 1 0.128477245569229 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCND1 ENSG00000110092 CDS Human protein_coding chr11:69462886 chr11:69462886 synonymous SNV . 0 21 hm5C_associated_SNPs_668 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:69462853-69462887
64251 chr19 39208572 39208572 1 + C T BLCA 39208572 + 39208552 39208592 41 CCTGCCCTGCCCCAGGACATCAACAATGGCTGGCAGCACTT CCTGCCCTGCCCCAGGACATTAACAATGGCTGGCAGCACTT Direct Loss 1 0.719385979665777 1 0.214807003736496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39208572 chr19:39208572 synonymous SNV . 0 21 hm5C_associated_SNPs_669 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39208560-39208580
64251 chr6 37280749 37280749 1 + C T BLCA 37280749 + 37280729 37280769 41 TCTCAAGACATGCTGCGAAGCATTGAGGCTGACAGCTTTTG TCTCAAGACATGCTGCGAAGTATTGAGGCTGACAGCTTTTG Direct Loss 1 0.168967856968119 1 0.0964062213897705 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37280749 chr6:37280749 synonymous SNV . 0 21 hm5C_associated_SNPs_671 0 0 2 BUD13 POSTAR2 ENCODE chr6:37280660-37280788
64251 chr17 4859385 4859385 1 + C A BLCA 4859385 + 4859365 4859405 41 GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA GTTGAGAAGAAGGCCTGCAAATGTCTGCTGCTGAAGGTCAA Direct Loss 1 0.472911250935279 1 0.117459416389465 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859385 chr17:4859385 nonsynonymous SNV 0.973 2 21 hm5C_associated_SNPs_672 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr15 22993125 22993125 1 + C T BLCA 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGGAGGTGGGGAACGCCATTCTCTTCTGCCTGCTCATCGA Direct Loss 1 0.253424223079417 1 0.0479011833667755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993125 synonymous SNV . 0 21 hm5C_associated_SNPs_673 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:22993117-22993138
64251 chr6 33657075 33657075 1 + C T BLCA 33657075 + 33657055 33657095 41 CCTCATCTGCTTCTCCATCGCGGCCCTGTTCACCAAGCGCT CCTCATCTGCTTCTCCATCGTGGCCCTGTTCACCAAGCGCT Direct Loss 1 0.203808810989377 1 0.38226518034935 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33657075 chr6:33657075 nonsynonymous SNV 0.239 1 21 hm5C_associated_SNPs_674 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:33657052-33657081
64251 chr13 114541062 114541062 1 - G A BLCA 114541062 - 114541042 114541082 41 CAGCGGCTTCGAGCTCTCCTCTGATGGCAGGACCTGCCAAG CAGCGGCTTCGAGCTCTCCTTTGATGGCAGGACCTGCCAAG Direct Loss 1 0.512295595856483 1 0.326903223991394 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541062 chr13:114541062 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_676 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:114541046-114541069
64251 chr4 5733343 5733343 1 + C T BLCA 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCCGCACCTTTCTCCGGGTGAACGCCTTCCC Direct Loss 1 0.0466106377158643 1 0.217384278774261 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733343 synonymous SNV . 0 21 hm5C_associated_SNPs_678 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr5 43649344 43649344 1 + C G BLCA 43649344 + 43649324 43649364 41 TGGCTGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACC TGGCTGGCATTGTGGGGTATGATACCGTCTGGGGAGTGACC Direct Loss 1 0.0889990939142398 1 0.0536502301692963 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43649344 chr5:43649344 nonsynonymous SNV 0.290 3 21 hm5C_associated_SNPs_680 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:43649340-43649353
64251 chr3 128973917 128973917 1 + C T BLCA 128973917 + 128973897 128973937 41 AGCTCTGCCCTCGTGTCTTCCTTGGTGTGTAGTTGCTGCTG AGCTCTGCCCTCGTGTCTTCTTTGGTGTGTAGTTGCTGCTG Direct Loss 1 0.690635981248975 1 0.614743411540985 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973917 chr3:128973917 synonymous SNV . 0 21 hm5C_associated_SNPs_683 0 0 1 TNRC6A POSTAR2 ENCODE chr3:128973877-128973917
64251 chr14 56119741 56119741 1 + C G BLCA 56119741 + 56119721 56119761 41 CTATTCTTTTTAAGGATCTTCAAGAAGAAAATGAATCTTTA CTATTCTTTTTAAGGATCTTGAAGAAGAAAATGAATCTTTA Direct Loss 1 0.475487501150948 1 0.754526495933533 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56119741 chr14:56119741 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_684 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr14:56119731-56119752
64251 chr1 155029461 155029461 1 + C A BLCA 155029461 + 155029441 155029481 41 AGCATCCTGGGAGTCGCCTCCTCCATAGCCCATGAGTTGGG AGCATCCTGGGAGTCGCCTCATCCATAGCCCATGAGTTGGG Direct Loss 1 0.798829256202058 1 0.947164177894592 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155029461 chr1:155029461 synonymous SNV . 0 21 hm5C_associated_SNPs_685 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155029431-155029469
64251 chr1 90473035 90473035 1 + C A BLCA 90473035 + 90473015 90473055 41 TGGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACT TGGTGGTCGATTTGAGAGCTACTACCGGAATAGCCTTGACT Direct Loss 1 0.0600426543930843 1 0.0507039427757263 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473035 chr1:90473035 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_686 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr19 39220041 39220041 1 + C G BLCA 39220041 + 39220021 39220061 41 CCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGA CCTCGACTACAAGTCCTTCTGCACGGCCTTGTATGGCGAGA Direct Loss 1 0.493704089528827 1 0.154013454914093 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39220041 chr19:39220041 nonsynonymous SNV 0.986 4 21 hm5C_associated_SNPs_687 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:39220010-39220069
64251 chr15 85189506 85189506 1 - G C BLCA 85189506 - 85189486 85189526 41 TGGCCTAGGGTGGCCGTCTTCTCCACATTGGCACCCGGAGT TGGCCTAGGGTGGCCGTCTTGTCCACATTGGCACCCGGAGT Direct Loss 1 0.866087269831789 1 0.894907832145691 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR73 ENSG00000177082 CDS Human protein_coding chr15:85189506 chr15:85189506 nonsynonymous SNV 0.088 0 21 hm5C_associated_SNPs_688 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:85189493-85189591
64251 chrX 153608140 153608140 1 + C G BLCA 153608140 + 153608120 153608160 41 CAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA CAGCTCGTCCGCCGCCTCCTGTTATAGCTTCTCTGGTGAGA Direct Loss 1 0.232590266794535 1 0.118998914957047 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608140 chrX:153608140 nonsynonymous SNV 0.023 2 21 hm5C_associated_SNPs_691 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr19 7584339 7584339 1 + C A BLCA 7584339 + 7584319 7584359 41 TGGAGCCCGTCTCGGAGGATCTGGACCCCGACGCCGAAGCT TGGAGCCCGTCTCGGAGGATATGGACCCCGACGCCGAAGCT Direct Loss 1 0.826231174680871 1 0.714444279670715 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584339 chr19:7584339 nonsynonymous SNV 0.298 1 21 hm5C_associated_SNPs_692 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584315-7584348
64251 chr12 57604652 57604652 1 + C G BLCA 57604652 + 57604632 57604672 41 CCCGGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC CCCGGCTTCCTGGGCGACCGGTGCCAGTACCGTGAGTGAGC Direct Loss 1 0.17380620299938 1 0.408910274505615 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604652 chr12:57604652 synonymous SNV . 0 21 hm5C_associated_SNPs_693 0 0 2 DDX55 POSTAR2 ENCODE chr12:57604608-57604662
64251 chr13 48936995 48936995 1 + C T BLCA 48936995 + 48936975 48937015 41 GTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCA GTTCACCTCGAACACCCAGGTGAGGTCAGAACAGGAGTGCA Direct Loss 1 0.63140627618481 1 0.772399246692657 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48936995 chr13:48936995 stopgain 0.957 1 21 hm5C_associated_SNPs_694 3 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48936989-48937032
64251 chr12 100995493 100995493 1 + C G BLCA 100995493 + 100995473 100995513 41 GTCAACTGATTGATGTTCTTCAAAACATGGTGAAAACATGC GTCAACTGATTGATGTTCTTGAAAACATGGTGAAAACATGC Direct Loss 1 0.421965537373863 1 0.189462840557098 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:100995493 chr12:100995493 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_695 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:100995456-100995505
64251 chr22 32217507 32217507 1 + C G BLCA 32217507 + 32217487 32217527 41 GGGCCATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG GGGCCATCCGGAGAAGCCATGCAGATCCACCACCAGACCCG Direct Loss 1 0.562362678143443 1 0.231375455856323 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32217507 chr22:32217507 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_697 0 0 1 PPIG POSTAR2 ENCODE chr22:32217487-32217563
64251 chr14 103390064 103390064 1 + C T BLCA 103390064 + 103390044 103390084 41 CCAGCACTGACCCAGGCGGTCTCCAAACTCTGGGTCCCCAA CCAGCACTGACCCAGGCGGTTTCCAAACTCTGGGTCCCCAA Direct Loss 1 0.685442275880864 1 0.223210126161575 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AMN ENSG00000166126 CDS Human protein_coding chr14:103390064 chr14:103390064 synonymous SNV . 0 21 hm5C_associated_SNPs_699 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr14:103390052-103390075
64251 chr19 10200684 10200684 1 + C T BRCA 10200684 + 10200664 10200704 41 CAGTTTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCG CAGTTTGCCTGCTCCTCCTGTGACCACGTCTGGTGGCGCCG Direct Loss 1 0.237350271965962 1 0.546983599662781 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200684 chr19:10200684 nonsynonymous SNV 0.995 0 21 hm5C_associated_SNPs_702 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chrX 105855830 105855830 1 + C T BRCA 105855830 + 105855810 105855850 41 CCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGAGGCCT CCTTCAGAAATAGAGCGCACTAGGAGAAACCAGAGAGGCCT Direct Loss 1 0.87286474732994 1 0.730656445026398 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855830 chrX:105855830 stopgain 0.968 0 21 hm5C_associated_SNPs_703 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrY 10037867 10037867 1 + C T BRCA 10037867 + 10037847 10037887 41 TTGATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCC TTGATCATCGACACTTCGAATGCACTTGCGGCCCGGGTTCC Direct Loss 1 0.329423767875985 1 0.0823284387588501 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037867 chrY:10037867 . . 0 21 hm5C_associated_SNPs_704 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chr12 105543489 105543489 1 + C T BRCA 105543489 + 105543469 105543509 41 CCAGATTGATTAAAGATATTCGATTTTTCAGGGAAATTAAG CCAGATTGATTAAAGATATTTGATTTTTCAGGGAAATTAAG Direct Loss 1 0.146461647512102 1 0.0398896932601929 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105543489 chr12:105543489 stopgain 1.000 1 21 hm5C_associated_SNPs_706 0 0 6 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:105543472-105543501
64251 chr17 66033483 66033483 1 + C T BRCA 66033483 + 66033463 66033503 41 CTTTTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAAT CTTTTCTCAAGGAAATGAGGTGTCGCAGAATAGAGGTCAAT Direct Loss 1 0.147741595165036 1 0.101103216409683 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033483 chr17:66033483 nonsynonymous SNV 0.074 3 21 hm5C_associated_SNPs_707 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr10 102763412 102763412 1 + C T BRCA 102763412 + 102763392 102763432 41 GACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCTT GACGCAGCTGTTTGGGGGCCTTGCCTCCTCCTCCTCCTCTT Direct Loss 1 0.366726740996758 1 0.0659126043319702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763412 chr10:102763412 nonsynonymous SNV 0.989 2 21 hm5C_associated_SNPs_708 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr10:102763391-102763422
64251 chr14 21967278 21967278 1 - G C BRCA 21967278 - 21967258 21967298 41 TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAACCA TAGTTTTTATTTCCTAGGTTGGTTCCACCAGTCATAAACCA Direct Loss 1 0.0221010256592465 1 0.148291110992432 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control METTL3 ENSG00000165819 CDS Human protein_coding chr14:21967278 chr14:21967278 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_709 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221659 chr14:21967260-21967280
64251 chr17 43183002 43183002 1 + C T BRCA 43183002 + 43182982 43183022 41 CCTAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCG CCTAGGTTGGACTGGTGCTATAATAACCAGTCACCAGTGCG Direct Loss 1 0.376895275494316 1 0.135788947343826 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NMT1 ENSG00000136448 CDS Human protein_coding chr17:43183002 chr17:43183002 stopgain 0.993 1 21 hm5C_associated_SNPs_710 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:43182984-43183022
64251 chr12 6619500 6619500 1 + C T BRCA 6619500 + 6619480 6619520 41 GATACAGAGTTATGTGTGTTCACTGTAAGGGCAGACCAACA GATACAGAGTTATGTGTGTTTACTGTAAGGGCAGACCAACA Direct Loss 1 0.313392979001315 1 0.105707168579102 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619500 chr12:6619500 . . 0 21 hm5C_associated_SNPs_713 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr15 44085898 44085898 1 + C G BRCA 44085898 + 44085878 44085918 41 CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGA CTCCCAGTGCCCCATCATCTGTACCCCCAGGGACTCGGAGA Direct Loss 1 0.293114317021753 1 0.0411170721054077 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085898 chr15:44085898 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_714 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:44085886-44085907
64251 chr17 7481290 7481290 1 + C G BRCA 7481290 + 7481270 7481310 41 AGGATCCAAGGTGATTCCCTCTCCAAGGGGACATCAGTGCC AGGATCCAAGGTGATTCCCTGTCCAAGGGGACATCAGTGCC Direct Loss 1 0.456449479461842 1 0.962983727455139 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA67 ENSG00000264772 ncRNA_exonic Human processed_transcript chr17:7481290 chr17:7481290 . . 0 21 hm5C_associated_SNPs_715 0 0 24 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:7481260-7481300
64251 chr19 49993282 49993282 1 + C T BRCA 49993282 + 49993262 49993302 41 TCTCACGGCCATGAGATCAACCCCATGCACCGCTCTGAGAC TCTCACGGCCATGAGATCAATCCCATGCACCGCTCTGAGAC Direct Loss 1 0.551144576705795 1 0.136706471443176 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993282 chr19:49993282 . . 0 21 hm5C_associated_SNPs_716 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr5 72187661 72187661 1 + C T BRCA 72187661 + 72187641 72187681 41 ATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAAC ATATTCAGATGCTAATGCCTTCACTGATCCAGAAATGGAAC Direct Loss 1 0.0843566937803131 1 0.0383711159229279 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187661 chr5:72187661 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_719 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr19 45406420 45406420 1 + C T BRCA 45406420 + 45406400 45406440 41 TGTGGCTTTGGCCTCACCATCGGCTGAGCCCTCCTGGCCCC TGTGGCTTTGGCCTCACCATTGGCTGAGCCCTCCTGGCCCC Direct Loss 1 0.844529531282254 1 0.816535830497742 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOMM40 ENSG00000130204 CDS Human protein_coding chr19:45406420 chr19:45406420 synonymous SNV . 0 21 hm5C_associated_SNPs_720 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:45406387-45406425
64251 chr15 91456118 91456118 1 + C A CESC 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACGTCCCAAAGGAGCCCCCCGTGCTGCG Direct Loss 1 0.651997244059571 1 0.870900750160217 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456118 synonymous SNV . 0 21 hm5C_associated_SNPs_721 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:91456118-91456153
64251 chr6 7581095 7581095 1 + C T CESC 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TGAAGGACCAGGATATCACGTGGTTCCAGAACTCTCTGAAA Direct Loss 1 0.169488767379399 1 0.191956222057343 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581095 nonsynonymous SNV 0.012 2 21 hm5C_associated_SNPs_722 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chrX 73044044 73044044 1 - G A CESC 73044044 - 73044024 73044064 41 GTTATCTATTGTGTGCCAATCTCATTGCTAGGCATTGGGGA GTTATCTATTGTGTGCCAATTTCATTGCTAGGCATTGGGGA Direct Loss 1 0.11217162779593 1 0.121601104736328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044044 chrX:73044044 . . 0 21 hm5C_associated_SNPs_723 0 0 39 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 22896271 22896271 1 + C T CESC 22896271 + 22896251 22896291 41 TAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAAGGA TAATCTGATTTTATGTGCTTTTGCTGTGATGGATTAAAGGA Direct Loss 1 0.432829285686537 1 0.115805417299271 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896271 chr7:22896271 . . 0 21 hm5C_associated_SNPs_725 0 0 87 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:22896220-22896280
64251 chrX 73043746 73043746 1 - G A CESC 73043746 - 73043726 73043766 41 TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGGAT TGATTACTTTCTGTGGGGCTTGGAACTACATGCCCTAGGAT Direct Loss 1 0.29828242855571 1 0.56615936756134 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043746 chrX:73043746 . . 0 21 hm5C_associated_SNPs_726 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr5 132203226 132203226 1 + C T CESC 132203226 + 132203206 132203246 41 ACATGGGGGACTGAAGAGTTCGAGAGATCCAAGAGGAAGAA ACATGGGGGACTGAAGAGTTTGAGAGATCCAAGAGGAAGAA Direct Loss 1 0.910987736374777 1 0.606588184833527 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203226 chr5:132203226 synonymous SNV . 0 21 hm5C_associated_SNPs_727 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 73981268 73981268 1 + C T CESC 73981268 + 73981248 73981288 41 GCGCTGTGGCCCCTGCCGCTCTTGGTGAAGATGACCCCGAA GCGCTGTGGCCCCTGCCGCTTTTGGTGAAGATGACCCCGAA Direct Loss 1 0.778921587445829 1 0.66872239112854 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981268 chr5:73981268 synonymous SNV . 0 21 hm5C_associated_SNPs_730 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:73981244-73981274
64251 chr6 7581100 7581100 1 + C A CESC 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATATCACGCGGTTACAGAACTCTCTGAAAGAGCT Direct Loss 1 0.229120387521737 1 0.138226062059402 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581100 nonsynonymous SNV 0.799 0 21 hm5C_associated_SNPs_731 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr7 100470816 100470816 1 + C T CESC 100470816 + 100470796 100470836 41 GTGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCT GTGTGGGCTGCTGCTCTCCTTTGAGGGCGAGTGTCAGGGCT Direct Loss 1 0.799593569002675 1 0.714592099189758 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470816 chr7:100470816 nonsynonymous SNV 0.996 5 21 hm5C_associated_SNPs_732 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100470785-100470859
64251 chr6 36564728 36564728 1 + C T CESC 36564728 + 36564708 36564748 41 CGAGATGCAGCTGATGCAGTCCGAGAGCTAGATGGAAGGTG CGAGATGCAGCTGATGCAGTTCGAGAGCTAGATGGAAGGTG Direct Loss 1 0.374158613730308 1 0.629717111587524 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564728 chr6:36564728 synonymous SNV . 0 21 hm5C_associated_SNPs_733 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:36564702-36564730
64251 chr1 10165581 10165581 1 + C T CESC 10165581 + 10165561 10165601 41 GCCTTTCCAACAGTATTCTCCGATTTTAAGGACTTGATTGG GCCTTTCCAACAGTATTCTCTGATTTTAAGGACTTGATTGG Direct Loss 1 0.0807289513764568 1 0.0898511409759521 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBE4B ENSG00000130939 CDS Human protein_coding chr1:10165581 chr1:10165581 synonymous SNV . 0 21 hm5C_associated_SNPs_734 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:10165576-10165594
64251 chr6 7572161 7572161 1 + C G CESC 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAGAGAAAATGACAAGGAAGAAACATGGATGCTGATG Direct Loss 1 0.503009627837474 1 0.8472900390625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572161 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_736 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7572126-7572168
64251 chr11 67052376 67052376 1 + C T CESC 67052376 + 67052356 67052396 41 ATGTCCAAGATGGGCAACCCCTTCCTGACCCAGTGGCAGCG ATGTCCAAGATGGGCAACCCTTTCCTGACCCAGTGGCAGCG Direct Loss 1 0.179851264940836 1 0.0828452408313751 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052376 chr11:67052376 synonymous SNV . 0 21 hm5C_associated_SNPs_737 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67052341-67052404
64251 chr3 184042681 184042681 1 + C T CESC 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAGGAACGAGGATGCCTGAAGGAAGAGCTGGAA Direct Loss 1 0.495088994840221 1 0.320417284965515 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042681 nonsynonymous SNV 0.978 4 21 hm5C_associated_SNPs_738 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr11 65402802 65402802 1 + C T CESC 65402802 + 65402782 65402822 41 GGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCC GGTGACCCAGCATGGCGCAGTGCCATCCTCAGCAACACGCC Direct Loss 1 0.387041791280784 1 0.170942187309265 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402802 chr11:65402802 synonymous SNV . 0 21 hm5C_associated_SNPs_739 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr1 146742597 146742597 1 + C T CESC 146742597 + 146742577 146742617 41 TTCTTTTTCTTGCCAGGGGCCATCGGGTTTTACTTTTCTCC TTCTTTTTCTTGCCAGGGGCTATCGGGTTTTACTTTTCTCC Direct Loss 1 0.13347082599438 1 0.279058992862701 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CHD1L ENSG00000131778 CDS Human protein_coding chr1:146742597 chr1:146742597 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_740 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:146742595-146742623
64251 chr12 21598304 21598304 1 + C T CESC 21598304 + 21598284 21598324 41 TCTAAAATATTGGAAGAATTCGATGTTGAAGAACAATCAAG TCTAAAATATTGGAAGAATTTGATGTTGAAGAACAATCAAG Direct Loss 1 0.616208158049293 1 0.229847818613052 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21598304 chr12:21598304 synonymous SNV . 0 21 hm5C_associated_SNPs_741 0 0 2 FUS POSTAR2 SRX029328 chr12:21598296-21598324
64251 chr3 31658471 31658471 1 + C T CESC 31658471 + 31658451 31658491 41 TCTTGCAGTATCTGAGAGACCGATTAACAAAACAAGAGTTC TCTTGCAGTATCTGAGAGACTGATTAACAAAACAAGAGTTC Direct Loss 1 0.306156657256975 1 0.203905254602432 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31658471 chr3:31658471 stopgain 1.000 1 21 hm5C_associated_SNPs_742 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:31658443-31658479
64251 chr7 133682272 133682272 1 + C T CESC 133682272 + 133682252 133682292 41 TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAG TCCTGCTCAAGACAGCCACATGAACACGGATCTCCCCCCAG Direct Loss 1 0.221946728185288 1 0.116682678461075 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682272 chr7:133682272 nonsynonymous SNV 0.031 0 21 hm5C_associated_SNPs_744 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr1 36028876 36028876 1 + C T CESC 36028876 + 36028856 36028896 41 TCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGTAT TCCTGATCAAGGAAGGGGCCTCCTCGCTTCTGTGCAAGTAT Direct Loss 1 0.0262044416105287 1 0.0427426695823669 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028876 chr1:36028876 nonsynonymous SNV 0.984 1 21 hm5C_associated_SNPs_745 0 0 1 GRWD1 POSTAR2 ENCODE chr1:36028869-36028984
64251 chr18 60642776 60642776 1 + C T CESC 60642776 + 60642756 60642796 41 TCTCTGTCGAAATGGAAAGCCGCTGCCTCTGTCCAGATCTT TCTCTGTCGAAATGGAAAGCTGCTGCCTCTGTCCAGATCTT Direct Loss 1 0.118391107208815 1 0.115067094564438 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60642776 chr18:60642776 nonsynonymous SNV 0.377 2 21 hm5C_associated_SNPs_746 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:60642766-60642791
64251 chr16 67319380 67319380 1 + C T CESC 67319380 + 67319360 67319400 41 TCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACC TCCACTGCCACTTCTTCCTGTGTGAGCTGGAGGCTTGCACC Direct Loss 1 0.415388201404005 1 0.303780287504196 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67319380 chr16:67319380 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_747 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67319349-67319387
64251 chr19 50027862 50027862 1 + C T CESC 50027862 + 50027842 50027882 41 ACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG ACCCTCCGGAGCTGCAACTTTGGTTCCTGCGGAATGGGCTG Direct Loss 1 0.511415453405971 1 0.738894939422607 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027862 chr19:50027862 nonsynonymous SNV 0.034 3 21 hm5C_associated_SNPs_750 0 0 3 DDX55 POSTAR2 ENCODE chr19:50027836-50027947
64251 chr3 130712932 130712932 1 + C G CESC 130712932 + 130712912 130712952 41 TCCTAGTGGATGATGATTTTCAAACCATAATGTAAGCTTTG TCCTAGTGGATGATGATTTTGAAACCATAATGTAAGCTTTG Direct Loss 1 0.301697395429812 1 0.197726100683212 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130712932 chr3:130712932 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_751 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:130712896-130712932
64251 chr6 160485837 160485837 1 + C T CESC 160485837 + 160485817 160485857 41 TGCCTCTTAACTTTTTTAGCCAGTATTTCTAAAGGAGACTT TGCCTCTTAACTTTTTTAGCTAGTATTTCTAAAGGAGACTT Direct Loss 1 0.0718099463094246 1 0.129366159439087 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160485837 chr6:160485837 nonsynonymous SNV 0.331 3 21 hm5C_associated_SNPs_752 0 0 4 EIF3H POSTAR2 ENCODE chr6:160485835-160485841
64251 chr22 18561178 18561178 1 + C T CESC 18561178 + 18561158 18561198 41 TCGACCTCTGCAGCCCCCCTCAGGGGGCTCGGGGGACCCCT TCGACCTCTGCAGCCCCCCTTAGGGGGCTCGGGGGACCCCT Direct Loss 1 0.909721784419272 1 0.982664108276367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEX26 ENSG00000215193 CDS Human protein_coding chr22:18561178 chr22:18561178 synonymous SNV . 0 21 hm5C_associated_SNPs_753 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:18561152-18561199
64251 chr19 19466095 19466095 1 + C T CESC 19466095 + 19466075 19466115 41 CTGAATAAAGCCTGTGGGAACGCCATGGATGCCCATGAAGC CTGAATAAAGCCTGTGGGAATGCCATGGATGCCCATGAAGC Direct Loss 1 0.647448752087655 1 0.454515844583511 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MAU2 ENSG00000129933 CDS Human protein_coding chr19:19466095 chr19:19466095 synonymous SNV . 0 21 hm5C_associated_SNPs_754 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr19:19466079-19466105
64251 chr17 4859382 4859382 1 + C T CESC 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCCGTTGAGAAGAAGGCCTGTAACTGTCTGCTGCTGAAGGT Direct Loss 1 0.498934274410593 1 0.0914114117622375 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859382 synonymous SNV . 0 21 hm5C_associated_SNPs_756 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr6 47577036 47577036 1 + C G CESC 47577036 + 47577016 47577056 41 TAGAAGCACTGAAAAAGGATCACGGGTAAGTAGCCCTTCTT TAGAAGCACTGAAAAAGGATGACGGGTAAGTAGCCCTTCTT Direct Loss 1 0.705870477839211 1 0.75274384021759 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577036 chr6:47577036 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_758 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr7 127228576 127228576 1 + C G CESC 127228576 + 127228556 127228596 41 GGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCGGGAA GGCCTCACCGTGTCCGCGCTGTTTTCGCGGATCTTCGGGAA Direct Loss 1 0.351852498877956 1 0.0747526586055756 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228576 chr7:127228576 synonymous SNV . 0 21 hm5C_associated_SNPs_759 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chrX 41201855 41201855 1 + C G CESC 41201855 + 41201835 41201875 41 CAGTCGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAA CAGTCGCTGGTGTGACAAATGAGATGAAGATGATTGGTCAA Direct Loss 1 0.733411364820404 1 0.420986145734787 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201855 chrX:41201855 stopgain 1.000 0 21 hm5C_associated_SNPs_760 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr9 139730261 139730261 1 + C T CESC 139730261 + 139730241 139730281 41 CGCCACGCTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG CGCCACGCTGGAGGAGCTGTTGGTGCAGCAGGAGACGGAGG Direct Loss 1 0.531704504243389 1 0.443979382514954 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139730261 chr9:139730261 nonsynonymous SNV 0.991 2 21 hm5C_associated_SNPs_761 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:139730240-139730280
64251 chr12 57919806 57919806 1 + C T CESC 57919806 + 57919786 57919826 41 GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCAC GCCCCGTGCCCAGGCACCCTTAGCTTCCCACTCCTCATCAC Direct Loss 1 0.643440004804816 1 0.380718886852264 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919806 chr12:57919806 nonsynonymous SNV 0.979 1 21 hm5C_associated_SNPs_762 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr2 219526252 219526252 1 + C G CESC 219526252 + 219526232 219526272 41 ACTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGGTGT ACTGACCGAAAGGTTTTCTTGAACATCCTGGAGGAAGGTGT Direct Loss 1 0.781554442228647 1 0.371061027050018 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCS1L ENSG00000074582 CDS Human protein_coding chr2:219526252 chr2:219526252 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_765 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:219526241-219526262
64251 chr1 28862519 28862519 1 + C T CESC 28862519 + 28862499 28862539 41 CACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGG CACGTGTACGGCTTCGGCCTTTCCAACTACCATCAGCTTGG Direct Loss 1 0.729624015255042 1 0.734801948070526 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862519 chr1:28862519 synonymous SNV . 0 21 hm5C_associated_SNPs_766 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:28862460-28862540
64251 chr17 33328374 33328374 1 + C T CESC 33328374 + 33328354 33328394 41 TTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAA TTCCCTCGCTGCACCCGAATTCGAGATGATAAGGACTGGAA Direct Loss 1 0.446139036012337 1 0.770045101642609 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33328374 chr17:33328374 synonymous SNV . 0 21 hm5C_associated_SNPs_768 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chr17:33328360-33328380
64251 chr1 978683 978683 1 + C T CESC 978683 + 978663 978703 41 GCGACGTGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG GCGACGTGTGCTGTGAAGAATGGGCAGGCAGCGTGTGAATG Direct Loss 1 0.379358023145464 1 0.311261773109436 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:978683 chr1:978683 synonymous SNV . 0 21 hm5C_associated_SNPs_769 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:978682-978683
64251 chr22 50960208 50960208 1 + C G CESC 50960208 + 50960188 50960228 41 CCCCCTGTGTGGAGGAGGCTCTGGGACAGAAGCGCAAGAGG CCCCCTGTGTGGAGGAGGCTGTGGGACAGAAGCGCAAGAGG Direct Loss 1 0.829489139186729 1 0.640529215335846 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50960208 chr22:50960208 nonsynonymous SNV 0.972 0 21 hm5C_associated_SNPs_770 0 0 6 DDX24 POSTAR2 ENCODE chr22:50960168-50960211
64251 chr19 3434306 3434306 1 + C T CESC 3434306 + 3434286 3434326 41 ACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG ACTGGAACAGGACCCAACTTTTCCCTGGGGGAGCTGCAGGG Direct Loss 1 0.402923493361621 1 0.796190679073334 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFIC ENSG00000141905 CDS Human protein_coding chr19:3434306 chr19:3434306 synonymous SNV . 0 21 hm5C_associated_SNPs_771 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3434296-3434324
64251 chr19 810808 810808 1 + C G CESC 810808 + 810788 810828 41 CACCACCTGCGGGTCTCCTTCTCCAAGTCCACCATCTAGGG CACCACCTGCGGGTCTCCTTGTCCAAGTCCACCATCTAGGG Direct Loss 1 0.848631605746699 1 0.959549129009247 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:810808 chr19:810808 nonsynonymous SNV 0.988 4 21 hm5C_associated_SNPs_773 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:810788-810839
64251 chr6 37284604 37284604 1 + C T CESC 37284604 + 37284584 37284624 41 TCCGCCTGTGGGACACATATCAGGTAGGAGGGATTCCCCGG TCCGCCTGTGGGACACATATTAGGTAGGAGGGATTCCCCGG Direct Loss 1 0.873314033889322 1 0.729830861091614 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37284604 chr6:37284604 stopgain 0.909 1 21 hm5C_associated_SNPs_774 0 0 2 PRPF8 POSTAR2 ENCODE chr6:37284601-37284654
64251 chr9 110068756 110068756 1 + C T CESC 110068756 + 110068736 110068776 41 CCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCT CCACCACCACAACTGTGGCTTAGGCTCCAACCCCTGTCCCT Direct Loss 1 0.713778124309679 1 0.365045994520187 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068756 chr9:110068756 stopgain 0.936 0 21 hm5C_associated_SNPs_775 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:110068711-110068758
64251 chr19 5144297 5144297 1 + C T CESC 5144297 + 5144277 5144317 41 GTGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGG GTGTCCCTAGGCCAGGTGGTTATCACCAAGAACCGCAACGG Direct Loss 1 0.370568929632049 1 0.132304191589355 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5144297 chr19:5144297 synonymous SNV . 0 21 hm5C_associated_SNPs_777 0 0 1 FXR2 POSTAR2 ENCODE chr19:5144257-5144306
64251 chr1 24022845 24022845 1 + C T CESC 24022845 + 24022825 24022865 41 CTCTTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAAT CTCTTTCAGTATGATGGGATTATCCTTCCTGGCAAATAAAT Direct Loss 1 0.0777798557100349 1 0.0473870933055878 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022845 chr1:24022845 synonymous SNV . 0 21 hm5C_associated_SNPs_778 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24022842-24022870
64251 chr10 17278316 17278316 1 + C T CESC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCCCTTTGGTTGATACCCACTCAAAA Direct Loss 1 0.292157230865219 1 0.330766350030899 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278316 synonymous SNV . 0 21 hm5C_associated_SNPs_779 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr10 91532517 91532517 1 + C G CESC 91532517 + 91532497 91532537 41 CAAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAAACGG CAAGTAAAGAAAATGTGTCTGAACCAAAACGAGCCAAACGG Direct Loss 1 0.285553906740029 1 0.302845358848572 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91532517 chr10:91532517 nonsynonymous SNV 0.051 1 21 hm5C_associated_SNPs_780 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:91532513-91532545
64251 chr3 138329875 138329875 1 + C G CESC 138329875 + 138329855 138329895 41 TATCTCCGGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA TATCTCCGGACTCTGCCACTGTGAGGTTAGTGCCCTGCCCA Direct Loss 1 0.765141296245757 1 0.810272395610809 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138329875 chr3:138329875 nonsynonymous SNV 0.005 1 21 hm5C_associated_SNPs_781 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:138329854-138329877
64251 chrX 100880767 100880767 1 + C G CESC 100880767 + 100880747 100880787 41 AAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAAAA AAACTTCAGGTTCTGAAACTGCTTTTGAATTTGGCTGAAAA Direct Loss 1 0.038759130292893 1 0.0526827871799469 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880767 chrX:100880767 synonymous SNV . 0 21 hm5C_associated_SNPs_782 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chr1 44878382 44878382 1 + C G CESC 44878382 + 44878362 44878402 41 CCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGTAC CCTCATCTAGCCCAGAGGATGGGAATGACAGATGTAAGTAC Direct Loss 1 0.706824709080394 1 0.603848576545715 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878382 chr1:44878382 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_783 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr16 1877400 1877400 1 + C T CESC 1877400 + 1877380 1877420 41 GGCCTACGCGCCCGAGGGCTCGCCCATCCTCATGCCCGCGT GGCCTACGCGCCCGAGGGCTTGCCCATCCTCATGCCCGCGT Direct Loss 1 0.822594192909232 1 0.0854902863502502 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877400 chr16:1877400 nonsynonymous SNV 0.477 0 21 hm5C_associated_SNPs_784 0 0 1 RPS3 POSTAR2 ENCODE chr16:1877360-1877426
64251 chr2 29147999 29147999 1 + C T CESC 29147999 + 29147979 29148019 41 TTGTATATGGCAGTTGGTTTCAGCCTACTATTGAGCGAGTG TTGTATATGGCAGTTGGTTTTAGCCTACTATTGAGCGAGTG Direct Loss 1 0.706116694892317 1 0.355070650577545 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR43 ENSG00000163811 CDS Human protein_coding chr2:29147999 chr2:29147999 stopgain 0.999 1 21 hm5C_associated_SNPs_785 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr2:29147979-29148003
64251 chr12 49720471 49720471 1 + C G CESC 49720471 + 49720451 49720491 41 GACTTCAGTGAGCCAGGCCTCAGGATTGCTCCTGGAGACCC GACTTCAGTGAGCCAGGCCTGAGGATTGCTCCTGGAGACCC Direct Loss 1 0.920004525569703 1 0.937892377376556 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TROAP ENSG00000135451 CDS Human protein_coding chr12:49720471 chr12:49720471 stopgain 0.993 0 21 hm5C_associated_SNPs_786 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:49720458-49720484
64251 chr7 73609171 73609171 1 + C T CESC 73609171 + 73609151 73609191 41 TTCAGAGATGGCCCTCCCCTCCGTGGATCCAACATGGATTT TTCAGAGATGGCCCTCCCCTTCGTGGATCCAACATGGATTT Direct Loss 1 0.528861539854357 1 0.104833662509918 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609171 chr7:73609171 synonymous SNV . 0 21 hm5C_associated_SNPs_788 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73609131-73609173
64251 chr20 39744076 39744076 1 + C G CESC 39744076 + 39744056 39744096 41 GATGATCTTTTTGATAGACTCAATGTGAGTAGATGAAGCAC GATGATCTTTTTGATAGACTGAATGTGAGTAGATGAAGCAC Direct Loss 1 0.471891342819845 1 0.136706441640854 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TOP1 ENSG00000198900 CDS Human protein_coding chr20:39744076 chr20:39744076 synonymous SNV . 0 21 hm5C_associated_SNPs_790 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:39744059-39744080
64251 chr20 62904609 62904609 1 + C T CESC 62904609 + 62904589 62904629 41 GCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACC GCAGCCTCCAGGACTTGGCTTGCATCGCCATCCGGGGCACC Direct Loss 1 0.373272161644136 1 0.0183124840259552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904609 chr20:62904609 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_791 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr20:62904589-62904610
64251 chr11 65271929 65271929 1 + C T CESC 65271929 + 65271909 65271949 41 GTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGA GTATGATTAAAAGTTGTGTTTCCCAATGCTTGGAGTAGTGA Direct Loss 1 0.369212739431099 1 0.219647109508514 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271929 chr11:65271929 . . 0 21 hm5C_associated_SNPs_792 0 0 123 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271900-65272140
64251 chr14 102466397 102466397 1 + C T COAD 102466397 + 102466377 102466417 41 AAGTTTGGTAGGCTGAAGGACGACAGAGAGAAGTGTGCAAA AAGTTTGGTAGGCTGAAGGATGACAGAGAGAAGTGTGCAAA Direct Loss 1 0.304947937524647 1 0.144290924072266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466397 chr14:102466397 synonymous SNV . 0 21 hm5C_associated_SNPs_795 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221668 chr14:102466360-102466400
64251 chr1 206902135 206902135 1 + C T COAD 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGGATTGTGGATGTGTACGAGAATCT Direct Loss 1 0.506300994609649 1 0.18753108382225 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902135 synonymous SNV . 0 21 hm5C_associated_SNPs_796 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:206902123-206902184
64251 chr11 65402839 65402839 1 + C T COAD 65402839 + 65402819 65402859 41 CGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCC CGCCCTCCCTGCTGGCGCTGTGCCATGTCCTGGATGATGCC Direct Loss 1 0.275528164099951 1 0.776579618453979 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402839 chr11:65402839 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_797 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr12 101680176 101680176 1 + C T COAD 101680176 + 101680156 101680196 41 GTTTTTTTTGACTATCACCTCGATCCTGGAGACTCAGGACA GTTTTTTTTGACTATCACCTTGATCCTGGAGACTCAGGACA Direct Loss 1 0.0955590517923189 1 0.0295332968235016 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101680176 chr12:101680176 nonsynonymous SNV 0.985 2 21 hm5C_associated_SNPs_799 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:101680171-101680196
64251 chr10 103901206 103901206 1 + C T COAD 103901206 + 103901186 103901226 41 GTTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGG GTTCCACATGTACCTATGGGTCCTTGGGATGGGGCCCAGGG Direct Loss 1 0.0805382550179556 1 0.0656197667121887 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901206 chr10:103901206 nonsynonymous SNV 0.967 0 21 hm5C_associated_SNPs_802 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chrX 153663636 153663636 1 + C T COAD 153663636 + 153663616 153663656 41 CCAGGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC CCAGGTTCATTCTGGCCAACTGCCTCTACCCAGTGTCTGCC Direct Loss 1 0.380862324317657 1 0.10688129067421 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663636 chrX:153663636 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_803 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153663625-153663646
64251 chr22 26291140 26291140 1 + C T COAD 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACGAGTGGCAGATGTGCTTCGACTGTGCTCAGATG Direct Loss 1 0.0976837410136495 1 0.199124187231064 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291140 nonsynonymous SNV 0.893 4 21 hm5C_associated_SNPs_804 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr9 117053104 117053104 1 + C T COAD 117053104 + 117053084 117053124 41 TAACAGGGGGAGCAGGGAGACGATGGGGACCCTGGCCCCAT TAACAGGGGGAGCAGGGAGATGATGGGGACCCTGGCCCCAT Direct Loss 1 0.380637771414852 1 0.538667559623718 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117053104 chr9:117053104 synonymous SNV . 0 21 hm5C_associated_SNPs_805 0 0 9 BUD13 POSTAR2 ENCODE chr9:117053089-117053128
64251 chr2 63834096 63834096 1 + C A COAD 63834096 + 63834076 63834116 41 GACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTCCTCTG GACAGAAGAAAAAGAAAGTGATTTTGAATTTCTTTCCTCTG Direct Loss 1 0.0728501598300311 1 0.0510233640670776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834096 chr2:63834096 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_808 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63834014-63834105
64251 chr17 48696108 48696108 1 + C T COAD 48696108 + 48696088 48696128 41 TTCGTGCTGACGGCCCAGTTCGTGCTAGTCAACGTGGTGAT TTCGTGCTGACGGCCCAGTTTGTGCTAGTCAACGTGGTGAT Direct Loss 1 0.504457631520874 1 0.145267128944397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48696108 chr17:48696108 synonymous SNV . 0 21 hm5C_associated_SNPs_810 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:48696091-48696121
64251 chr19 30498487 30498487 1 + C A COAD 30498487 + 30498467 30498507 41 ATTTGCTAGCTGATAAAGAACTGTGGGCTCGACTTGAAGAA ATTTGCTAGCTGATAAAGAAATGTGGGCTCGACTTGAAGAA Direct Loss 1 0.669883210784913 1 0.0569188594818115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30498487 chr19:30498487 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_811 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:30498478-30498502
64251 chr16 1551467 1551467 1 + C T COAD 1551467 + 1551447 1551487 41 GCTGCTGGCCTTGGCCTCCCCCCAGCCTGCGGGTGACGGCG GCTGCTGGCCTTGGCCTCCCTCCAGCCTGCGGGTGACGGCG Direct Loss 1 0.357098137509681 1 0.699783742427826 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551467 chr16:1551467 nonsynonymous SNV 0.000 2 21 hm5C_associated_SNPs_812 0 0 1 SF3B4 POSTAR2 ENCODE chr16:1551462-1551481
64251 chr22 29439389 29439389 1 + C T COAD 29439389 + 29439369 29439409 41 TCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACCGC TCAACAAGCAGAAAGTGGCTTGAGCAAGGATCCAGCACCGC Direct Loss 1 0.317232258353003 1 0.103974103927612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29439389 chr22:29439389 stopgain 0.996 1 21 hm5C_associated_SNPs_813 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:29439379-29439476
64251 chr7 128407566 128407566 1 + C T COAD 128407566 + 128407546 128407586 41 CAGAATGGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTT CAGAATGGGTAAAGACAGAGTGAGAGCAGTTTGTTGAGTTT Direct Loss 1 0.802485977726202 1 0.719535410404205 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407566 chr7:128407566 stopgain 0.998 1 21 hm5C_associated_SNPs_814 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr7 27833973 27833973 1 + C T COAD 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAATGTCTTCACAAAGAAAATGGGGAATCAGCAGAAAGTGA Direct Loss 1 0.722307018488931 1 0.538338184356689 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833973 nonsynonymous SNV 0.931 0 21 hm5C_associated_SNPs_818 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833950-27833986
64251 chr16 1550684 1550684 1 + C T COAD 1550684 + 1550664 1550704 41 CCGGATCCACCCCGAGGGGCCTCCCCTGAAATTCCAGGTGA CCGGATCCACCCCGAGGGGCTTCCCCTGAAATTCCAGGTGA Direct Loss 1 0.329734334562923 1 0.0635590851306915 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550684 chr16:1550684 nonsynonymous SNV 0.773 3 21 hm5C_associated_SNPs_819 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr3 38180279 38180279 1 + C T COAD 38180279 + 38180259 38180299 41 CTGCTCTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTC CTGCTCTCAACATGCGAGTGTGGCGCCGCCTGTCTCTGTTC Direct Loss 1 0.627154860319839 1 0.284379512071609 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180279 chr3:38180279 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_821 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr3 184042675 184042675 1 + C T COAD 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAGGAATGAGGACGCCTGAAGGAAGAG Direct Loss 1 0.599816295469271 1 0.541805028915405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042675 stopgain 0.991 0 21 hm5C_associated_SNPs_822 0 0 19 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr13 100188911 100188911 1 + C G COAD 100188911 + 100188891 100188931 41 GTTACGATGTTGAAGATGGTCAGAGGTTCTGTAATCCTGGA GTTACGATGTTGAAGATGGTGAGAGGTTCTGTAATCCTGGA Direct Loss 1 0.772380641481973 1 0.353776693344116 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100188911 chr13:100188911 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_823 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr13:100188862-100188931
64251 chr1 22835072 22835072 1 + C A COAD 22835072 + 22835052 22835092 41 TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG TGGTTCAGGTGGTTTCAATTATCTGATATCAGCAGTTCTAG Direct Loss 1 0.442196669175574 1 0.451607644557953 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835072 chr1:22835072 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_825 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:22835041-22835088
64251 chr12 101711340 101711340 1 + C T COAD 101711340 + 101711320 101711360 41 GGGATGGTGGCAGAGGAAATCGAAGAGGAACCTGCCGCAGG GGGATGGTGGCAGAGGAAATTGAAGAGGAACCTGCCGCAGG Direct Loss 1 0.704065745029266 1 0.781430900096893 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711340 chr12:101711340 synonymous SNV . 0 21 hm5C_associated_SNPs_826 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr5 133909449 133909449 1 + C T COAD 133909449 + 133909429 133909469 41 TTATTGAACAGGATCTGTGTCGAGGTAGGCGCCTTCCCCAC TTATTGAACAGGATCTGTGTTGAGGTAGGCGCCTTCCCCAC Direct Loss 1 0.759364459581918 1 0.840532302856445 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JADE2 ENSG00000043143 CDS Human protein_coding chr5:133909449 chr5:133909449 stopgain 0.997 0 21 hm5C_associated_SNPs_827 0 0 3 PRPF8 POSTAR2 ENCODE chr5:133909437-133909546
64251 chr9 131455942 131455942 1 + C T COAD 131455942 + 131455922 131455962 41 GACGAAACGTTCGAGTCAAACGCAGAATAAAGCCAGCAGGA GACGAAACGTTCGAGTCAAATGCAGAATAAAGCCAGCAGGA Direct Loss 1 0.792952466090778 1 0.719130039215088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455942 chr9:131455942 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_828 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr5 72187658 72187658 1 + C T COAD 72187658 + 72187638 72187678 41 AATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGG AATATATTCAGATGCTAATGTCTCCACTGATCCAGAAATGG Direct Loss 1 0.0167376399551516 1 0.268950164318085 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187658 chr5:72187658 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_829 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr20 37159852 37159852 1 + C A COAD 37159852 + 37159832 37159872 41 AGATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGGAGA AGATTCAGCACTTTTGGAAGACATTGGTTGCCAGATGGAGA Direct Loss 1 0.0204094193089379 1 0.0588981211185455 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37159852 chr20:37159852 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_830 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:37159795-37159857
64251 chr1 145663167 145663167 1 + C T COAD 145663167 + 145663147 145663187 41 GGTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTT GGTCTTTACTAGCTTTGGGGTCATTTGGATCACACGATGTT Direct Loss 1 0.0244440956908374 1 0.0561688244342804 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663167 chr1:145663167 synonymous SNV . 0 21 hm5C_associated_SNPs_831 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr14 73576075 73576075 1 + C T COAD 73576075 + 73576055 73576095 41 GTGCTCTTCAGAAAAGGTTGCGTGATAGAGAAAAGGAAATG GTGCTCTTCAGAAAAGGTTGTGTGATAGAGAAAAGGAAATG Direct Loss 1 0.448230635244769 1 0.137890577316284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576075 chr14:73576075 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_832 0 0 19 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr14 75746599 75746599 1 + C T COAD 75746599 + 75746579 75746619 41 GGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCA GGACTTCTGCACGGACCTGGTCGTCTCCAGTGCCAACTTCA Direct Loss 1 0.0613805725758228 1 0.0197004079818726 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746599 chr14:75746599 nonsynonymous SNV 0.981 0 21 hm5C_associated_SNPs_833 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr16 29998787 29998787 1 + C T COAD 29998787 + 29998767 29998807 41 ACCTCTGGTGGCTATGGCAGCGGGGGGCAGATGGGTGCGGC ACCTCTGGTGGCTATGGCAGTGGGGGGCAGATGGGTGCGGC Direct Loss 1 0.922251954346718 1 0.975719690322876 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29998787 chr16:29998787 nonsynonymous SNV 0.996 2 21 hm5C_associated_SNPs_834 0 0 3 HNRNPC POSTAR2 SRX1438577 chr16:29998780-29998800
64251 chr11 9462007 9462007 1 + C T COAD 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGAGGAATTGGGGAGTGATGAAGATGAT Direct Loss 1 0.627555755433314 1 0.3639195561409 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462007 synonymous SNV . 0 21 hm5C_associated_SNPs_836 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr20 43545459 43545459 1 + C T COAD 43545459 + 43545439 43545479 41 CATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC CATTTTGAGACCCATGAGGCTGCACAGCAGGCCATCAACAC Direct Loss 1 0.2464612920911 1 0.0618321597576141 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545459 chr20:43545459 synonymous SNV . 0 21 hm5C_associated_SNPs_837 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:43545440-43545460
64251 chr13 24823790 24823790 1 + C T COAD 24823790 + 24823770 24823810 41 TCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACC TCCTGAAGACTCGGTTGCTGTAGACCCCCAGAAGGAAGACC Direct Loss 1 0.148307395091956 1 0.632135808467865 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPATA13 ENSG00000182957 CDS Human protein_coding chr13:24823790 chr13:24823790 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_838 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr13:24823764-24823794
64251 chr12 52380706 52380706 1 + C T COAD 52380706 + 52380686 52380726 41 GCTTGTATATTGGGAGATTGCTCGAAGATGCAATTCTGGAG GCTTGTATATTGGGAGATTGTTCGAAGATGCAATTCTGGAG Direct Loss 1 0.919526476198712 1 0.642359852790833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52380706 chr12:52380706 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_839 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:52380673-52380711
64251 chr3 15287176 15287176 1 + C T COAD 15287176 + 15287156 15287196 41 ACACAATCCATTACACGGTTCGGGTAAGTAAAACCAACACA ACACAATCCATTACACGGTTTGGGTAAGTAAAACCAACACA Direct Loss 1 0.40639735236491 1 0.395789682865143 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15287176 chr3:15287176 nonsynonymous SNV 0.926 4 21 hm5C_associated_SNPs_841 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:15287142-15287178
64251 chr6 36169261 36169261 1 + C T COAD 36169261 + 36169241 36169281 41 CCTACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACTGCT CCTACTGTGAGGCCCACTCGTCACCAGGTGCGGCCACTGCT Direct Loss 1 0.123088126698659 1 0.0684768855571747 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36169261 chr6:36169261 nonsynonymous SNV 0.101 4 21 hm5C_associated_SNPs_842 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:36169260-36169290
64251 chr11 125513698 125513698 1 + C T COAD 125513698 + 125513678 125513718 41 CTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGT CTTTTTTAGGGGCAAAAAGGTCCCGAGTCACTTCAGGTGGT Direct Loss 1 0.290853739184248 1 0.445923268795013 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513698 chr11:125513698 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_844 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr1 109811555 109811555 1 + C T COAD 109811555 + 109811535 109811575 41 TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGGG TTGCTGGGGCCAAGCTGCCCTGCTACGAGGCCCTGCGTGGG Direct Loss 1 0.325479481668194 1 0.433158814907074 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811555 chr1:109811555 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_846 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr19 42392911 42392911 1 + C T COAD 42392911 + 42392891 42392931 41 GGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGAC GGCCCTCCTGCAGCACGTGGTCCTGCAGTTTGAGCCAGGAC Direct Loss 1 0.0830601226215868 1 0.0578704476356506 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392911 chr19:42392911 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_847 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42392895-42392919
64251 chr6 146875716 146875716 1 + C T COAD 146875716 + 146875696 146875736 41 AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTGTT AGATCAAGAGACCTTGAGAGTAGAGAACAAATCCCAGTGTT Direct Loss 1 0.566800330621499 1 0.747126698493958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875716 chr6:146875716 nonsynonymous SNV 0.472 1 21 hm5C_associated_SNPs_848 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:146875703-146875731
64251 chr12 109547637 109547637 1 + C T COAD 109547637 + 109547617 109547657 41 TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAGACG TTCTTGATCTTTTTCAGAAGTGGCACCATGTACTACAGACG Direct Loss 1 0.561620339265628 1 0.15120255947113 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547637 chr12:109547637 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_850 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr7 77214878 77214878 1 + C T COAD 77214878 + 77214858 77214898 41 AGATCATTGTAATGGCCTGCCGAGAATTTGAGATGGGAAGG AGATCATTGTAATGGCCTGCTGAGAATTTGAGATGGGAAGG Direct Loss 1 0.794293973091604 1 0.482620060443878 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77214878 chr7:77214878 stopgain 1.000 1 21 hm5C_associated_SNPs_853 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77214858-77214896
64251 chr5 179146762 179146762 1 + C T COAD 179146762 + 179146742 179146782 41 GAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTG GAGTACGTACCTGATCCAGATGCAGAGAAACCTGAGGATTG Direct Loss 1 0.559863241069815 1 0.144998729228973 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146762 chr5:179146762 synonymous SNV . 0 21 hm5C_associated_SNPs_854 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr15 34517761 34517761 1 + C T COAD 34517761 + 34517741 34517781 41 CGAAGTGACCGGGGCAGTGGCCAGGGAGACTCGCTCTACCC CGAAGTGACCGGGGCAGTGGTCAGGGAGACTCGCTCTACCC Direct Loss 1 0.870736288270061 1 0.771359086036682 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMC4 ENSG00000128463 CDS Human protein_coding chr15:34517761 chr15:34517761 synonymous SNV . 0 21 hm5C_associated_SNPs_855 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:34517734-34517762
64251 chr20 35866808 35866808 1 + C T COAD 35866808 + 35866788 35866828 41 CCTCTTTCCTTTGGCAGGATCGCTGCAGAGCAGAGCAGTAG CCTCTTTCCTTTGGCAGGATTGCTGCAGAGCAGAGCAGTAG Direct Loss 1 0.311319844424801 1 0.117760986089706 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35866808 chr20:35866808 synonymous SNV . 0 21 hm5C_associated_SNPs_856 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35866786-35866824
64251 chr21 45736382 45736382 1 + C T COAD 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGATGCCCTCTGCCTTCGACCGGA Direct Loss 1 0.404871729614239 1 0.181510835886002 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736382 nonsynonymous SNV 0.394 4 21 hm5C_associated_SNPs_857 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr12 6965312 6965312 1 + C T COAD 6965312 + 6965292 6965332 41 TGCCTGACATTGTCAGAGATCGGGTATGACTGCCCCCTATG TGCCTGACATTGTCAGAGATTGGGTATGACTGCCCCCTATG Direct Loss 1 0.804323424189166 1 0.837440371513367 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6965312 chr12:6965312 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_858 0 0 8 DDX24 POSTAR2 ENCODE chr12:6965227-6965322
64251 chr9 131247109 131247109 1 + C T COAD 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGTGAGCCGAGAAGAGCGAGGAG Direct Loss 1 0.43350783313357 1 0.449010848999023 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247109 stopgain 1.000 1 21 hm5C_associated_SNPs_859 0 0 8 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr14 23794460 23794460 1 + C T COAD 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCTGGGCTAGAGCGACATCATGG Direct Loss 1 0.443374716431745 1 0.322359412908554 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794460 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_860 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr10 45477989 45477989 1 + C T COAD 45477989 + 45477969 45478009 41 GAAGAAGGGACTCTGATCATCGAGGGGCTCCTCAACATTGC GAAGAAGGGACTCTGATCATTGAGGGGCTCCTCAACATTGC Direct Loss 1 0.8860158075489 1 0.838503420352936 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45477989 chr10:45477989 synonymous SNV . 0 21 hm5C_associated_SNPs_863 0 0 3 BUD13 POSTAR2 ENCODE chr10:45477917-45478108
64251 chr2 32673990 32673990 1 + C A COAD 32673990 + 32673970 32674010 41 AAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTT AAATTGATTTATCAGATGTCATTTCAGGTAGTGATTTCTTT Direct Loss 1 0.00769762938740581 1 0.106033056974411 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673990 chr2:32673990 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_864 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr9 104314845 104314845 1 + C T COAD 104314845 + 104314825 104314865 41 GGGATGAAGAAGAACGAGAACGAGAAAGGAGGGAGAAGGAG GGGATGAAGAAGAACGAGAATGAGAAAGGAGGGAGAAGGAG Direct Loss 1 0.830996603833619 1 0.639787375926971 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RNF20 ENSG00000155827 CDS Human protein_coding chr9:104314845 chr9:104314845 stopgain 0.997 0 21 hm5C_associated_SNPs_865 0 0 2 AKAP8L POSTAR2 ENCODE chr9:104314815-104314906
64251 chr19 4423372 4423372 1 + C T COAD 4423372 + 4423352 4423392 41 GGAAAAAGGAAGAAGAGAAACGGTTAAGAGAAGAAGAGAAG GGAAAAAGGAAGAAGAGAAATGGTTAAGAGAAGAAGAGAAG Direct Loss 1 0.194163406106905 1 0.425950706005096 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4423372 chr19:4423372 nonsynonymous SNV 0.942 3 21 hm5C_associated_SNPs_866 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:4423340-4423380
64251 chr2 28002338 28002338 1 + C T COAD 28002338 + 28002318 28002358 41 TCGTGGAAAAGAAAAAAATACGCTCCCTTTAAACGGTGGAT TCGTGGAAAAGAAAAAAATATGCTCCCTTTAAACGGTGGAT Direct Loss 1 0.212361000314455 1 0.125858277082443 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL33 ENSG00000243147 CDS Human protein_coding chr2:28002338 chr2:28002338 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_867 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:28002300-28002340
64251 chr6 30692147 30692147 1 + C T COAD 30692147 + 30692127 30692167 41 GCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGA GCAGAAGAGGAGGAGGATTTTGGTGAGGAGGCCGAAGAGGA Direct Loss 1 0.660017265318579 1 0.636239290237427 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692147 chr6:30692147 synonymous SNV . 0 21 hm5C_associated_SNPs_868 0 0 45 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr20 30381750 30381750 1 + C A COAD 30381750 + 30381730 30381770 41 CAAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGA CAAGAACTGTGGAAATATGCACTTTCTCGTTTGATTCTCGA Direct Loss 1 0.0236944635647456 1 0.0281953811645508 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381750 chr20:30381750 nonsynonymous SNV 0.878 3 21 hm5C_associated_SNPs_869 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:30381710-30381755
64251 chr11 68204451 68204451 1 + C T COAD 68204451 + 68204431 68204471 41 CCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGA CCCGACTGTATCGACGGCTCTGACGAGCTCATGTGTGGTGA Direct Loss 1 0.415833140199473 1 0.488582879304886 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204451 chr11:68204451 synonymous SNV . 0 21 hm5C_associated_SNPs_870 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr19 42729206 42729206 1 + C T COAD 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA GAGTTCTTGGAGCATCAGGGTACCCACTTTGACTCCCTAGA Direct Loss 1 0.118331111534799 1 0.061006635427475 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729206 synonymous SNV . 0 21 hm5C_associated_SNPs_871 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:42729188-42729216
64251 chr21 38853089 38853089 1 + C T COAD 38853089 + 38853069 38853109 41 GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGG GAAAAGTGGATGGATCGTTATGAAATTGACTCCTTGATAGG Direct Loss 1 0.640245581694782 1 0.45547080039978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853089 chr21:38853089 synonymous SNV . 0 21 hm5C_associated_SNPs_872 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:38852989-38853112
64251 chr2 176987600 176987600 1 + C T COAD 176987600 + 176987580 176987620 41 TGAGGGCGACGAGGTGTTCGCGGCGCGCTTCGGGCCGCCGG TGAGGGCGACGAGGTGTTCGTGGCGCGCTTCGGGCCGCCGG Direct Loss 1 0.917603227040904 1 0.80779230594635 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176987600 chr2:176987600 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_873 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:176987553-176987604
64251 chr10 103920362 103920362 1 + C T COAD 103920362 + 103920342 103920382 41 CGGTGGCCAGAAGCTTCTGACGAGAAAGGCTGACAGCAGCT CGGTGGCCAGAAGCTTCTGATGAGAAAGGCTGACAGCAGCT Direct Loss 1 0.893422287565373 1 0.722001791000366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920362 chr10:103920362 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_874 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103920330-103920445
64251 chr2 175268839 175268839 1 + C T COAD 175268839 + 175268819 175268859 41 CTTTGAAAATAGAGGGAGTTCGTAATATTTCTAATCAACTT CTTTGAAAATAGAGGGAGTTTGTAATATTTCTAATCAACTT Direct Loss 1 0.63364217170803 1 0.251094162464142 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175268839 chr2:175268839 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_875 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:175268836-175268874
64251 chr9 139749738 139749738 1 + C T COAD 139749738 + 139749718 139749758 41 GGGCAGACAGGCCCGGGGGGCGTCGTGGGTCTGGACGACCT GGGCAGACAGGCCCGGGGGGTGTCGTGGGTCTGGACGACCT Direct Loss 1 0.205771144000797 1 0.257625818252563 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139749738 chr9:139749738 synonymous SNV . 0 21 hm5C_associated_SNPs_876 0 0 2 DDX24 POSTAR2 ENCODE chr9:139749725-139749787
64251 chr2 70122252 70122252 1 + C T COAD 70122252 + 70122232 70122272 41 GGCGTTCCCGGTCCACATCCCGGGAGAGAGAACGCAGGCGC GGCGTTCCCGGTCCACATCCTGGGAGAGAGAACGCAGGCGC Direct Loss 1 0.986512195839829 1 0.867622494697571 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122252 chr2:70122252 nonsynonymous SNV 0.950 3 21 hm5C_associated_SNPs_877 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:70122223-70122274
64251 chr19 7620161 7620161 1 + C T COAD 7620161 + 7620141 7620181 41 CTCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGCACAG CTCTACGAGAAGGTTTTCTCTAGGCGCGCGGACCGGCACAG Direct Loss 1 0.655706399668238 1 0.968588709831238 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620161 chr19:7620161 synonymous SNV . 0 21 hm5C_associated_SNPs_879 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7620154-7620178
64251 chr10 93695421 93695421 1 + C T COAD 93695421 + 93695401 93695441 41 TTTGTTATTTCAGGCTAGATCGCCTTTTTATTTTACTGGAT TTTGTTATTTCAGGCTAGATTGCCTTTTTATTTTACTGGAT Direct Loss 1 0.45730818610066 1 0.441728532314301 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93695421 chr10:93695421 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_880 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:93695414-93695441
64251 chr5 122144038 122144038 1 + C T COAD 122144038 + 122144018 122144058 41 GTTTGTAGAAAAACGGAGAGCAGCTCTTGAAAGGTAATTCT GTTTGTAGAAAAACGGAGAGTAGCTCTTGAAAGGTAATTCT Direct Loss 1 0.349128051767622 1 0.139478862285614 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122144038 chr5:122144038 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_881 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:122143977-122144050
64251 chr11 65632544 65632544 1 + C T COAD 65632544 + 65632524 65632564 41 GGGAACCCTGAATCAGGGGCCATGACCTCTCCAAACCCTCT GGGAACCCTGAATCAGGGGCTATGACCTCTCCAAACCCTCT Direct Loss 1 0.24311900117397 1 0.130011796951294 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632544 chr11:65632544 synonymous SNV . 0 21 hm5C_associated_SNPs_882 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr11:65632540-65632560
64251 chr19 49611242 49611242 1 + C T COAD 49611242 + 49611222 49611262 41 AGCGGAGCAAGGACAAGGACCGGGACCGGAAGCGGCGAAGC AGCGGAGCAAGGACAAGGACTGGGACCGGAAGCGGCGAAGC Direct Loss 1 0.923896239430046 1 0.837428689002991 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611242 chr19:49611242 nonsynonymous SNV 0.907 2 21 hm5C_associated_SNPs_883 0 0 6 RPS3 POSTAR2 ENCODE chr19:49611201-49611256
64251 chr10 75551705 75551705 1 + C T COAD 75551705 + 75551685 75551725 41 AACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGCTTCCGG AACACAAGAAGACGCTGGAGTGGCTCTTCCCCGGCTTCCGG Direct Loss 1 0.430419349068117 1 0.35894364118576 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551705 chr10:75551705 nonsynonymous SNV 0.975 2 21 hm5C_associated_SNPs_885 0 0 7 GRWD1 POSTAR2 ENCODE chr10:75551658-75551711
64251 chr21 45534115 45534115 1 + C T COAD 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGCACCACTTCCATTTCAAGGGCTCTGTGCACAG Direct Loss 1 0.753807041562689 1 0.466874927282333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534115 synonymous SNV . 0 21 hm5C_associated_SNPs_886 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr21:45534090-45534121
64251 chr11 95561126 95561126 1 + C T COAD 95561126 + 95561106 95561146 41 GTAACACCTCCCTCCTCCAACGGTATTAATGAGGAGTTGTC GTAACACCTCCCTCCTCCAATGGTATTAATGAGGAGTTGTC Direct Loss 1 0.639740376312128 1 0.175070703029633 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95561126 chr11:95561126 synonymous SNV . 0 21 hm5C_associated_SNPs_887 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:95561102-95561127
64251 chr16 30939906 30939906 1 + C A COAD 30939906 + 30939886 30939926 41 GGTTCTGAATCCGAGCCAGGCTTTCTCATCCTGCCACCCTG GGTTCTGAATCCGAGCCAGGATTTCTCATCCTGCCACCCTG Direct Loss 1 0.0713810842668096 1 0.0221398770809174 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30939906 chr16:30939906 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_888 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30939890-30939918
64251 chr12 112229168 112229168 1 + C T COAD 112229168 + 112229148 112229188 41 ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG ATTTGGCCCCACGGCTGGGGTCGCCATTGCCTCCCATGAGG Direct Loss 1 0.180860167981825 1 0.339537382125854 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229168 chr12:112229168 nonsynonymous SNV 0.169 2 21 hm5C_associated_SNPs_891 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr16 53338084 53338084 1 + C A COAD 53338084 + 53338064 53338104 41 GTGAAAACCTTAAAGAGGAGCCTCAGTCTTCTGAAGAAGAA GTGAAAACCTTAAAGAGGAGACTCAGTCTTCTGAAGAAGAA Direct Loss 1 0.0419956834723485 1 0.0815096199512482 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53338084 chr16:53338084 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_893 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:53338059-53338094
64251 chr7 4801817 4801817 1 + C A COAD 4801817 + 4801797 4801837 41 CTTCTTCCTCCACTCCAGCCCTCACCAGCCCTTTGCAGCTC CTTCTTCCTCCACTCCAGCCATCACCAGCCCTTTGCAGCTC Direct Loss 1 0.0858556092667188 1 0.0235738456249237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4801817 chr7:4801817 nonsynonymous SNV 0.991 3 21 hm5C_associated_SNPs_894 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:4801800-4801820
64251 chr12 112321465 112321465 1 + C T COAD 112321465 + 112321445 112321485 41 TTTTACTCCAAACACCACAGCCGGACTATCCCAAAGGATAT TTTTACTCCAAACACCACAGTCGGACTATCCCAAAGGATAT Direct Loss 1 0.37594652329725 1 0.231883496046066 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321465 chr12:112321465 synonymous SNV . 0 21 hm5C_associated_SNPs_896 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chr11 65826382 65826382 1 + C T COAD 65826382 + 65826362 65826402 41 CCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCGG CCTCTGAGAGCTCTGGGGACTGGGAGAAAGACTCAACCCGG Direct Loss 1 0.931084743418834 1 0.953819274902344 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826382 chr11:65826382 nonsynonymous SNV 0.991 2 21 hm5C_associated_SNPs_899 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chr7 139107012 139107012 1 + C T COAD 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAAGATAAGAAGTGGTCCTATGAGAGTGCTAAT Direct Loss 1 0.195669035192647 1 0.368648648262024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107012 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_901 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr5 176522651 176522651 1 + C A COAD 176522651 + 176522631 176522671 41 TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGG TCCTCGGAGCAGTGAGGGGCAGCTCTCCTTCCCAGTCCTGG Direct Loss 1 0.171259019087149 1 0.123506665229797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522651 chr5:176522651 nonsynonymous SNV 0.449 2 21 hm5C_associated_SNPs_902 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr10 103827230 103827230 1 + C T COAD 103827230 + 103827210 103827250 41 GCCCCTCCAGTCCCCTGCTTCGAAGTGAAATCTTCAAACTG GCCCCTCCAGTCCCCTGCTTTGAAGTGAAATCTTCAAACTG Direct Loss 1 0.527021062117876 1 0.480087429285049 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827230 chr10:103827230 stopgain 0.816 0 21 hm5C_associated_SNPs_903 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:103827203-103827230
64251 chr5 159437849 159437849 1 + C T COAD 159437849 + 159437829 159437869 41 AGAACTGGAAAAAAACATGTCGGATGAAGAGAAACAGGTAA AGAACTGGAAAAAAACATGTTGGATGAAGAGAAACAGGTAA Direct Loss 1 0.49096799659974 1 0.51782488822937 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437849 chr5:159437849 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_904 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159437839-159437861
64251 chr15 64448279 64448279 1 - G T COAD 64448279 - 64448259 64448299 41 AAACCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGAT AAACCCCTGAAGGATGTGATAATCGCAGACTGCGGCAAGAT Direct Loss 1 0.411804044764775 1 0.0306911170482635 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448279 chr15:64448279 synonymous SNV . 0 21 hm5C_associated_SNPs_905 0 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr9 104314839 104314839 1 + C T COAD 104314839 + 104314819 104314859 41 CTAAACGGGATGAAGAAGAACGAGAACGAGAAAGGAGGGAG CTAAACGGGATGAAGAAGAATGAGAACGAGAAAGGAGGGAG Direct Loss 1 0.826671256072008 1 0.538669466972351 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RNF20 ENSG00000155827 CDS Human protein_coding chr9:104314839 chr9:104314839 stopgain 0.982 0 21 hm5C_associated_SNPs_906 0 0 2 AKAP8L POSTAR2 ENCODE chr9:104314815-104314906
64251 chr15 22955235 22955235 1 + C T COAD 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGAGCGGCTTTGACATAAAAGTACCACGCCG Direct Loss 1 0.781652060794559 1 0.417085647583008 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955235 synonymous SNV . 0 21 hm5C_associated_SNPs_907 0 0 7 GRWD1 POSTAR2 ENCODE chr15:22955131-22955243
64251 chr8 124146369 124146369 1 + C T COAD 124146369 + 124146349 124146389 41 CATAGGTATATATGAGAGATCGAGAAATTGCTGCCACAGCC CATAGGTATATATGAGAGATTGAGAAATTGCTGCCACAGCC Direct Loss 1 0.805955475553534 1 0.544965147972107 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124146369 chr8:124146369 stopgain 0.987 0 21 hm5C_associated_SNPs_908 0 0 1 ZNF622 POSTAR2 ENCODE chr8:124146357-124146423
64251 chr10 60549151 60549151 1 + C T COAD 60549151 + 60549131 60549171 41 TTTCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT TTTCAGTATCATTTAAACAGTGTTCCCGAATGTATGGTGCT Direct Loss 1 0.0124022511715459 1 0.0512466132640839 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549151 chr10:60549151 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_910 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60549137-60549216
64251 chr21 47929258 47929258 1 + C A COAD 47929258 + 47929238 47929278 41 CGCCCTCCACTGAAGGAGTTCTTTGTGGATGATTTTGAGGA CGCCCTCCACTGAAGGAGTTATTTGTGGATGATTTTGAGGA Direct Loss 1 0.0779962534239664 1 0.0638832449913025 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47929258 chr21:47929258 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_911 0 0 2 ZNF622 POSTAR2 ENCODE chr21:47929255-47929289
64251 chr15 78841245 78841245 1 + C T COAD 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGTGTGAGAAGAAAGAAAAAGAA Direct Loss 1 0.679974846375557 1 0.439445644617081 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841245 nonsynonymous SNV 0.991 0 21 hm5C_associated_SNPs_912 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr14 24886071 24886071 1 + C T COAD 24886071 + 24886051 24886091 41 CCCAGGTGGCCTCCCTGAGTCGGGACCTCCAGTTCCCCTGC CCCAGGTGGCCTCCCTGAGTTGGGACCTCCAGTTCCCCTGC Direct Loss 1 0.939329109672053 1 0.865206718444824 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24886071 chr14:24886071 nonsynonymous SNV 0.584 2 21 hm5C_associated_SNPs_913 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:24886055-24886085
64251 chr1 163310211 163310211 1 + C T COAD 163310211 + 163310191 163310231 41 ATATTTCAGAGAAAACCAAGCGTTTGGTAAACATCTTTTCT ATATTTCAGAGAAAACCAAGTGTTTGGTAAACATCTTTTCT Direct Loss 1 0.0642170277275656 1 0.0626834332942963 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163310211 chr1:163310211 nonsynonymous SNV 0.990 2 21 hm5C_associated_SNPs_915 0 0 2 BUD13 POSTAR2 ENCODE chr1:163310194-163310211
64251 chr4 88967960 88967960 1 + C T COAD 88967960 + 88967940 88967980 41 TGGAAGAGATATTGGAAATTCGCATTCACAAACTACACTAT TGGAAGAGATATTGGAAATTTGCATTCACAAACTACACTAT Direct Loss 1 0.322084725968437 1 0.458364933729172 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKD2 ENSG00000118762 CDS Human protein_coding chr4:88967960 chr4:88967960 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_916 0 0 1 U2AF2 POSTAR2 ENCODE chr4:88967879-88967970
64251 chr20 55088433 55088433 1 + C T COAD 55088433 + 55088413 55088453 41 GGCACCAAGGAGGATGTGGACGTGCTGAAGACAAGGATGGA GGCACCAAGGAGGATGTGGATGTGCTGAAGACAAGGATGGA Direct Loss 1 0.430893494080252 1 0.162117272615433 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55088433 chr20:55088433 synonymous SNV . 0 21 hm5C_associated_SNPs_917 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr20:55088407-55088462
64251 chr2 38908437 38908437 1 + C T COAD 38908437 + 38908417 38908457 41 TCCAGGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCGTC TCCAGGTGCTCTGGACCCCTTGGGTGCTGTCAAATGGCGTC Direct Loss 1 0.767203908871581 1 0.73688668012619 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908437 chr2:38908437 nonsynonymous SNV 0.332 1 21 hm5C_associated_SNPs_919 0 0 5 BUD13 POSTAR2 ENCODE chr2:38908425-38908459
64251 chr12 58109596 58109596 1 + C T COAD 58109596 + 58109576 58109616 41 GACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA GACTACATCGATCGCGTGGATGAGCCCTTGTCCTGCTCTTA Direct Loss 1 0.453037423676995 1 0.399131238460541 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109596 chr12:58109596 synonymous SNV . 0 21 hm5C_associated_SNPs_921 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr16 77232113 77232113 1 + C T COAD 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGAAAGAGGAGGACTGGCTCTTCATTCGTTACCCA Direct Loss 1 0.53536584551316 1 0.148256629705429 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232113 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_922 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:77232100-77232120
64251 chr20 37662905 37662905 1 + C T COAD 37662905 + 37662885 37662925 41 CTACATGAGAGATGTGACTGCCATTGAATCGGCCTGGCTGT CTACATGAGAGATGTGACTGTCATTGAATCGGCCTGGCTGT Direct Loss 1 0.0652547383895402 1 0.0816755592823029 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37662905 chr20:37662905 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_923 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr20:37662886-37662906
64251 chr20 2840990 2840990 1 + C T COAD 2840990 + 2840970 2841010 41 ATGGGCTTCATGGTGACTTCCGGAGACACTTCAGCATGGGC ATGGGCTTCATGGTGACTTCTGGAGACACTTCAGCATGGGC Direct Loss 1 0.552627671317042 1 0.874943852424622 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840990 chr20:2840990 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_924 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:2840951-2840999
64251 chr11 65402797 65402797 1 + C T COAD 65402797 + 65402777 65402817 41 ATGAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAAC ATGAGGGTGACCCAGCATGGTGCAGCGCCATCCTCAGCAAC Direct Loss 1 0.290344796432752 1 0.121876180171967 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402797 chr11:65402797 nonsynonymous SNV 0.957 4 21 hm5C_associated_SNPs_925 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr2 233681615 233681615 1 + C T COAD 233681615 + 233681595 233681635 41 AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGC AAGAGAGGCAGAAATGAGGGTAAAACGGGAAGAGGAAGAGC Direct Loss 1 0.270332935727995 1 0.417643517255783 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681615 chr2:233681615 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_926 0 0 12 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:233681600-233681620
64251 chr1 212792728 212792728 1 + C T COAD 212792728 + 212792708 212792748 41 GAAGCTGGAAAGTGTGAATGCTGAACTGAAGGCTCAGATTG GAAGCTGGAAAGTGTGAATGTTGAACTGAAGGCTCAGATTG Direct Loss 1 0.85940342344272 1 0.158988267183304 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ATF3 ENSG00000162772 CDS Human protein_coding chr1:212792728 chr1:212792728 nonsynonymous SNV 0.953 1 21 hm5C_associated_SNPs_929 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212792699-212792783
64251 chr4 184192371 184192371 1 + C T COAD 184192371 + 184192351 184192391 41 CTGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGAC CTGTATTTCAACCAAACCAGTCGTTAGTAGATTCTATAGAC Direct Loss 1 0.0277076053252189 1 0.0834928154945374 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184192371 chr4:184192371 nonsynonymous SNV 0.021 0 21 hm5C_associated_SNPs_930 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:184192353-184192373
64251 chr3 52245357 52245357 1 + C T COAD 52245357 + 52245337 52245377 41 ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGG ACGAGTTCTCTGATTGACACTGTACGGTCCTATGCTGCTGG Direct Loss 1 0.161561818880442 1 0.496318966150284 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245357 chr3:52245357 synonymous SNV . 0 21 hm5C_associated_SNPs_931 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr15 68583512 68583512 1 + C T DLBC 68583512 + 68583492 68583532 41 GCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTAACTAC GCCTGGCTGCCCGAGCAGTTTGGGCTAATGACATTAACTAC Direct Loss 1 0.725573948849419 1 0.789464175701141 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583512 chr15:68583512 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_933 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr3 57293965 57293965 1 + C T ESCA 57293965 + 57293945 57293985 41 ATGTTGTTTATGAAACTATGCGCCAAATCTTAGCTGCCCGG ATGTTGTTTATGAAACTATGTGCCAAATCTTAGCTGCCCGG Direct Loss 1 0.765548151806898 1 0.125298380851746 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57293965 chr3:57293965 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_937 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:57293953-57293991
64251 chr1 46497074 46497074 1 + C T ESCA 46497074 + 46497054 46497094 41 GGCCTACAGCTATGGAGACCCGAGGCCGTGGGACCTCACAG GGCCTACAGCTATGGAGACCTGAGGCCGTGGGACCTCACAG Direct Loss 1 0.690314812675036 1 0.481148302555084 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MAST2 ENSG00000086015 CDS Human protein_coding chr1:46497074 chr1:46497074 stopgain 0.945 0 21 hm5C_associated_SNPs_938 0 0 6 BUD13 POSTAR2 ENCODE chr1:46497068-46497087
64251 chrX 70787359 70787359 1 + C T ESCA 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATTCTGAAGTGTGTTCCCAATAGTGTACTC Direct Loss 1 0.230814182551906 1 0.0646421611309052 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787359 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_940 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr11 46392886 46392886 1 + C G ESCA 46392886 + 46392866 46392906 41 TTCCAGCAGAAGTTCACCTTCCACAGCAAGGAGATTGTGGC TTCCAGCAGAAGTTCACCTTGCACAGCAAGGAGATTGTGGC Direct Loss 1 0.285238374984155 1 0.240533500909805 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46392886 chr11:46392886 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_941 0 0 1 SF3B4 POSTAR2 ENCODE chr11:46392812-46392888
64251 chr9 130236144 130236144 1 + C A ESCA 130236144 + 130236124 130236164 41 ATTCTGGAGCAAGATGGAATCGAGAACTCTCGGGACAGCCC ATTCTGGAGCAAGATGGAATAGAGAACTCTCGGGACAGCCC Direct Loss 1 0.908973425463353 1 0.796690404415131 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRSAM1 ENSG00000148356 CDS Human protein_coding chr9:130236144 chr9:130236144 synonymous SNV . 0 21 hm5C_associated_SNPs_943 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr9:130236136-130236189
64251 chr19 10812147 10812147 1 + C T ESCA 10812147 + 10812127 10812167 41 GACAGTCAAGATGGCGGGAGCAGCTACCCAGGCTTCCCTGG GACAGTCAAGATGGCGGGAGTAGCTACCCAGGCTTCCCTGG Direct Loss 1 0.564212094917138 1 0.610100746154785 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812147 chr19:10812147 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_944 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:10812147-10812148
64251 chr5 102611913 102611913 1 + C T ESCA 102611913 + 102611893 102611933 41 ACGCTCCAAACAGCTAGATGCAGGACTTGCCCGTTCCTCTC ACGCTCCAAACAGCTAGATGTAGGACTTGCCCGTTCCTCTC Direct Loss 1 0.899410881129096 1 0.777849078178406 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102611913 chr5:102611913 nonsynonymous SNV 0.236 0 21 hm5C_associated_SNPs_945 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:102611880-102611940
64251 chr2 74757418 74757418 1 + C A ESCA 74757418 + 74757398 74757438 41 GATACCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCCG GATACCAGGACCCGGGAGGCATCAGAGAACTCTGGAACCCG Direct Loss 1 0.728553108653682 1 0.860278785228729 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757418 chr2:74757418 synonymous SNV . 0 21 hm5C_associated_SNPs_946 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:74757398-74757422
64251 chr10 74034859 74034859 1 + C T ESCA 74034859 + 74034839 74034879 41 TCTCCCTTCCTCCCTGGCTTCAGCCAGTCCCTGACGCTGAG TCTCCCTTCCTCCCTGGCTTTAGCCAGTCCCTGACGCTGAG Direct Loss 1 0.448229384172514 1 0.126209944486618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034859 chr10:74034859 synonymous SNV . 0 21 hm5C_associated_SNPs_947 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:74034743-74034873
64251 chr3 184102443 184102443 1 + C A ESCA 184102443 + 184102423 184102463 41 AGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGC AGAGCTTCGGGGGCACGTGGATGCCCTGCCCTACTGTGGGC Direct Loss 1 0.367613405888821 1 0.129048585891724 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184102443 chr3:184102443 nonsynonymous SNV 0.985 0 21 hm5C_associated_SNPs_948 0 0 8 BUD13 POSTAR2 ENCODE chr3:184102421-184102476
64251 chrX 53223826 53223826 1 - G A ESCA 53223826 - 53223806 53223846 41 GCCCAGTCCACTGGCATCATCGAGCACGGCCTCCTCTACAA GCCCAGTCCACTGGCATCATTGAGCACGGCCTCCTCTACAA Direct Loss 1 0.600187172637872 1 0.892893075942993 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM5C ENSG00000126012 CDS Human protein_coding chrX:53223826 chrX:53223826 nonsynonymous SNV 0.260 1 21 hm5C_associated_SNPs_949 0 0 6 NOP58 POSTAR2 GSE43666,GSM1067861 chrX:53223794-53223832
64251 chr3 41278166 41278166 1 + C T ESCA 41278166 + 41278146 41278186 41 TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGCCAA TTCAGTTGAGCTGACCAGCTTTCTCTTCAGAACAGAGCCAA Direct Loss 1 0.374671013973165 1 0.0563907325267792 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41278166 chr3:41278166 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_952 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41278082-41278174
64251 chr2 74683272 74683272 1 + C G ESCA 74683272 + 74683252 74683292 41 CTCTCCACTTCGGGACCTATCAGGAGGGTTAGGGGGTCAGG CTCTCCACTTCGGGACCTATGAGGAGGGTTAGGGGGTCAGG Direct Loss 1 0.92781947967403 1 0.884620606899261 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INO80B ENSG00000115274 CDS Human protein_coding chr2:74683272 chr2:74683272 stopgain 0.996 0 21 hm5C_associated_SNPs_954 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:74683241-74683272
64251 chr16 74339565 74339565 1 + C T GBM 74339565 + 74339545 74339585 41 AAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAA AAAAAGGATAGGAAAGAGGATAAGGAGAAAGATAAAGATAA Direct Loss 1 0.537653313839913 1 0.400518894195557 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339565 chr16:74339565 synonymous SNV . 0 21 hm5C_associated_SNPs_955 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067862 chr16:74339543-74339570
64251 chr8 126194360 126194360 1 + C A GBM 126194360 + 126194340 126194380 41 CTTAGGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTA CTTAGGTGAAAGAAGAACGTACAGAAAAAATACCAGATTTA Direct Loss 1 0.331628125999664 1 0.204154312610626 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126194360 chr8:126194360 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_957 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221665 chr8:126194340-126194360
64251 chr17 40651020 40651020 1 + C T GBM 40651020 + 40651000 40651040 41 CTGTTATCCTTGGTATCATCCATATGCTGTTTGGAGTCAGC CTGTTATCCTTGGTATCATCTATATGCTGTTTGGAGTCAGC Direct Loss 1 0.0873704179435016 1 0.25391948223114 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40651020 chr17:40651020 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_958 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40650960-40651052
64251 chr19 47700626 47700626 1 + C A GBM 47700626 + 47700606 47700646 41 CCTGACCTGCTTCCTGAGGACTTTGTCAGGTTGGTGTCAGT CCTGACCTGCTTCCTGAGGAATTTGTCAGGTTGGTGTCAGT Direct Loss 1 0.0790434272243542 1 0.05692258477211 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SAE1 ENSG00000142230 CDS Human protein_coding chr19:47700626 chr19:47700626 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_959 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47700503-47700636
64251 chr17 7476181 7476181 1 + C T GBM 7476181 + 7476161 7476201 41 TGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA TGTCTGCGAGCCAGGATTCCTGGTAAGAAAGGCATTTGCAA Direct Loss 1 0.702718071731279 1 0.237196028232574 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476181 chr17:7476181 stopgain 0.996 0 21 hm5C_associated_SNPs_960 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr6 31604122 31604122 1 + C A GBM 31604122 + 31604102 31604142 41 AGTTGCCGGCTGGAGGAGTTCTCTACCCTCCACCTTCCTTC AGTTGCCGGCTGGAGGAGTTATCTACCCTCCACCTTCCTTC Direct Loss 1 0.711174524512022 1 0.365950584411621 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604122 chr6:31604122 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_961 0 0 23 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31604060-31604160
64251 chr16 1817164 1817164 1 + C A GBM 1817164 + 1817144 1817184 41 CTCCAGATGGCCAGTGGGATCTGAGCAACTATCACCTAATG CTCCAGATGGCCAGTGGGATATGAGCAACTATCACCTAATG Direct Loss 1 0.519125655754139 1 0.298732221126556 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1817164 chr16:1817164 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_962 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1817138-1817164
64251 chr7 133164812 133164812 1 + C T GBM 133164812 + 133164792 133164832 41 GTTTCTCTGCAGGTTCGAATCGTCCTCCCATGCCATCAGTA GTTTCTCTGCAGGTTCGAATTGTCCTCCCATGCCATCAGTA Direct Loss 1 0.252685370403905 1 0.117782890796661 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164812 chr7:133164812 nonsynonymous SNV 0.986 1 21 hm5C_associated_SNPs_963 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:133164792-133164813
64251 chr11 32953991 32953991 1 + C T GBM 32953991 + 32953971 32954011 41 TGCTCAGTCTTACTCATCTGCGATTCCATCATCAGGGTATC TGCTCAGTCTTACTCATCTGTGATTCCATCATCAGGGTATC Direct Loss 1 0.0965841583946275 1 0.0125726759433746 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953991 chr11:32953991 nonsynonymous SNV 0.294 0 21 hm5C_associated_SNPs_964 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:32953960-32954000
64251 chrX 154005135 154005135 1 + C T GBM 154005135 + 154005115 154005155 41 AAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTG AAAAGAGGTAGAATTGGTTTTTGAGTAGTGAAGGCCACTTG Direct Loss 1 0.646503943744519 1 0.416101843118668 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005135 chrX:154005135 nonsynonymous SNV 0.444 1 21 hm5C_associated_SNPs_965 0 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chr17 64783073 64783073 1 + C A GBM 64783073 + 64783053 64783093 41 AAAATCCTTGTCCAAGGAGGCTGTTTCTGTCTGCAAAGGAG AAAATCCTTGTCCAAGGAGGATGTTTCTGTCTGCAAAGGAG Direct Loss 1 0.0437115910760614 1 0.140262216329575 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64783073 chr17:64783073 nonsynonymous SNV 0.978 4 21 hm5C_associated_SNPs_966 0 0 2 GRWD1 POSTAR2 ENCODE chr17:64783028-64783093
64251 chr4 53579475 53579475 1 + C A GBM 53579475 + 53579455 53579495 41 CACAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGA CACAGAAGGGTAAAGTAAGTATCCATAAAACCCAGAGAAGA Direct Loss 1 0.65877127557047 1 0.905031561851501 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579475 chr4:53579475 . . 0 21 hm5C_associated_SNPs_967 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr15 78838067 78838067 1 + C T GBM 78838067 + 78838047 78838087 41 AGTGACCCTAGTGGAAATTACGGGGGATGGAAGGCCACATG AGTGACCCTAGTGGAAATTATGGGGGATGGAAGGCCACATG Direct Loss 1 0.958377252270605 1 0.894859194755554 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78838067 chr15:78838067 synonymous SNV . 0 21 hm5C_associated_SNPs_970 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:78838027-78838094
64251 chr1 12052619 12052619 1 + C G GBM 12052619 + 12052599 12052639 41 TCCCCACCTCCAGACACGTACAGGAATGCAGAACTGGACCC TCCCCACCTCCAGACACGTAGAGGAATGCAGAACTGGACCC Direct Loss 1 0.805769865238703 1 0.859966397285461 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12052619 chr1:12052619 stopgain 0.997 0 21 hm5C_associated_SNPs_972 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:12052600-12052620
64251 chr12 101711355 101711355 1 + C T GBM 101711355 + 101711335 101711375 41 GAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTT GAAATCGAAGAGGAACCTGCTGCAGGAGATGATGAAGAGTT Direct Loss 1 0.420557164865162 1 0.470639228820801 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711355 chr12:101711355 synonymous SNV . 0 21 hm5C_associated_SNPs_973 0 0 5 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr5 149755836 149755836 1 + C T GBM 149755836 + 149755816 149755856 41 CCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATAGTGA CCAGCAGAGGATTCTTCAAGTAGTGAGGAATCAGATAGTGA Direct Loss 1 0.280440901406096 1 0.195944458246231 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755836 chr5:149755836 synonymous SNV . 0 21 hm5C_associated_SNPs_974 0 0 13 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:149755819-149755836
64251 chr19 55817715 55817715 1 + C A GBM 55817715 + 55817695 55817735 41 GTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTC GTCTTCCAAAAGCCCGTCCGATTCCAGGTGGACATCAGCTC Direct Loss 1 0.122866399454878 1 0.198597103357315 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817715 chr19:55817715 synonymous SNV . 0 21 hm5C_associated_SNPs_975 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr3 9489393 9489393 1 + C T GBM 9489393 + 9489373 9489413 41 ATTGCTGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA ATTGCTGCAGAAAAACTAGTTCCCAAGCCACCTCCAGCAAA Direct Loss 1 0.499940041869554 1 0.23016494512558 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9489393 chr3:9489393 synonymous SNV . 0 21 hm5C_associated_SNPs_977 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr3:9489380-9489420
64251 chr1 28600565 28600565 1 + C T GBM 28600565 + 28600545 28600585 41 CCTCAGCTGACATCCTGGAGCCCTCTCCACACCCAGACATG CCTCAGCTGACATCCTGGAGTCCTCTCCACACCCAGACATG Direct Loss 1 0.025506134434734 1 0.0483695268630981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28600565 chr1:28600565 nonsynonymous SNV 0.975 0 21 hm5C_associated_SNPs_979 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr1:28600551-28600584
64251 chr20 55968365 55968365 1 + C G GBM 55968365 + 55968345 55968385 41 TGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTT TGGGGTGCAGCAGCTGCACCGCACCTTGATCCAGCGGACTT Direct Loss 1 0.0757625689027981 1 0.0707361102104187 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968365 chr20:55968365 nonsynonymous SNV 0.982 4 21 hm5C_associated_SNPs_981 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr5 17275370 17275370 1 + C T GBM 17275370 + 17275350 17275390 41 AAGAAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAA AAGAAGGGCTACAATGTGAATGACGAGAAAGCCAAGGAGAA Direct Loss 1 0.555215822582465 1 0.28209576010704 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275370 chr5:17275370 synonymous SNV . 0 21 hm5C_associated_SNPs_982 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr14 105936268 105936268 1 + C T GBM 105936268 + 105936248 105936288 41 CCCTGCCCCCAGTCAAGCGGCGGCGGATGAACTGGATCGAC CCCTGCCCCCAGTCAAGCGGTGGCGGATGAACTGGATCGAC Direct Loss 1 0.696821611525895 1 0.430686682462692 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936268 chr14:105936268 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_983 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105936234-105936282
64251 chr18 77474881 77474881 1 + C G HNSC 77474881 + 77474861 77474901 41 GAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGA GAAGTCCTCCTCCTCCGCCTGTGATGGCGAAAGCGAGGGGA Direct Loss 1 0.387166079926089 1 0.363945364952087 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474881 chr18:77474881 nonsynonymous SNV 0.009 3 21 hm5C_associated_SNPs_986 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr7 101813790 101813790 1 + C G HNSC 101813790 + 101813770 101813810 41 GCTCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA GCTCTCATCGGCCAATCACTGCCTCCAGCTGGCCTCACAGA Direct Loss 1 0.055697478543347 1 0.464294135570526 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101813790 chr7:101813790 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_987 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr7:101813772-101813794
64251 chr1 198233296 198233296 1 + C T HNSC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTTATTGAAGATAATGAACTAAA Direct Loss 1 0.12451885002953 1 0.391125023365021 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233296 synonymous SNV . 0 21 hm5C_associated_SNPs_988 0 0 4 WDR33 POSTAR2 GSE61123,GSM1496985 chr1:198233270-198233299
64251 chr5 56526784 56526784 1 + C T HNSC 56526784 + 56526764 56526804 41 GCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAAAATT GCTTTGATTCTGCTATTGGGTGTCCTAATGGAGGTAAAATT Direct Loss 1 0.20648396539873 1 0.143549859523773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526784 chr5:56526784 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_989 0 0 1 GRWD1 POSTAR2 ENCODE chr5:56526751-56526799
64251 chr19 30502098 30502098 1 + C G HNSC 30502098 + 30502078 30502118 41 CAGCACTGGCAGTGGCCACTCTGCCCAGGAGCTGCCGACCA CAGCACTGGCAGTGGCCACTGTGCCCAGGAGCTGCCGACCA Direct Loss 1 0.803954198076844 1 0.176653861999512 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30502098 chr19:30502098 nonsynonymous SNV 0.193 1 21 hm5C_associated_SNPs_990 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:30502069-30502103
64251 chr1 154313342 154313342 1 + C T HNSC 154313342 + 154313322 154313362 41 CTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTACTT CTGTGCAGTGTGGAGGTCATTCGTCTGGGCCACAGCTACTT Direct Loss 1 0.195010803639552 1 0.0404886603355408 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313342 chr1:154313342 synonymous SNV . 0 21 hm5C_associated_SNPs_991 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr7 65419170 65419170 1 + C G HNSC 65419170 + 65419150 65419190 41 TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC TACTTTGTGCTGAAGGAGTTGTGCATCATCTGCATCGTCAC Direct Loss 1 0.787929429286937 1 0.765077590942383 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419170 chr7:65419170 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_992 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:65419104-65419176
64251 chr7 128407640 128407640 1 + C T HNSC 128407640 + 128407620 128407660 41 GAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCA GAAGAGACCAAAGACTGGATTCTTCCCTCAGACTATGATCA Direct Loss 1 0.0224579756124075 1 0.052566796541214 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407640 chr7:128407640 synonymous SNV . 0 21 hm5C_associated_SNPs_993 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr1 117631430 117631430 1 + C G HNSC 117631430 + 117631410 117631450 41 GTGATTCTTCCAGGGCACCTCAACACCTTTGCTTCGAATAG GTGATTCTTCCAGGGCACCTGAACACCTTTGCTTCGAATAG Direct Loss 1 0.562637347727036 1 0.154687702655792 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117631430 chr1:117631430 stopgain 0.337 0 21 hm5C_associated_SNPs_995 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117631429-117631455
64251 chr1 89298809 89298809 1 + C T HNSC 89298809 + 89298789 89298829 41 TGGGGCTAGCGAGAAAGATGCAGAGGATGTAAAAAAGCACC TGGGGCTAGCGAGAAAGATGTAGAGGATGTAAAAAAGCACC Direct Loss 1 0.559668366691935 1 0.827740252017975 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKN2 ENSG00000065243 CDS Human protein_coding chr1:89298809 chr1:89298809 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_996 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:89298762-89298809
64251 chr16 2569563 2569563 1 + C T HNSC 2569563 + 2569543 2569583 41 AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAG AGCTTCCTCCAGCTGGGCGCTGGCCTGAGCGTGGGCCTGAG Direct Loss 1 0.45255865024903 1 0.647213757038116 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569563 chr16:2569563 synonymous SNV . 0 21 hm5C_associated_SNPs_997 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2569543-2569569
64251 chr8 98657027 98657027 1 + C T HNSC 98657027 + 98657007 98657047 41 GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT GGCGGCGGCCGTGCCGGCCGTGGCCCCCGACGACCTGGCCT Direct Loss 1 0.777289126534301 1 0.53326153755188 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657027 chr8:98657027 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_998 0 0 7 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr19 50905073 50905073 1 + C T HNSC 50905073 + 50905053 50905093 41 CTGGGGGGCCCCCACCATCCCGCGGCTCCGTGCCTGTGCTC CTGGGGGGCCCCCACCATCCTGCGGCTCCGTGCCTGTGCTC Direct Loss 1 0.89185475849083 1 0.697320520877838 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905073 chr19:50905073 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_999 2 0 2 EFTUD2 POSTAR2 ENCODE chr19:50905034-50905088
64251 chr9 33917126 33917126 1 + C G HNSC 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAACAGCTGAGATTTGCTTTACGACGACT Direct Loss 1 0.260062524468202 1 0.156642228364944 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917126 stopgain 1.000 1 21 hm5C_associated_SNPs_1000 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chrX 100880789 100880789 1 + C G HNSC 100880789 + 100880769 100880809 41 TTTTGAATTTGGCTGAAAATCCAGCCATGACTAGGGAACTG TTTTGAATTTGGCTGAAAATGCAGCCATGACTAGGGAACTG Direct Loss 1 0.619942954973601 1 0.157597571611404 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880789 chrX:100880789 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1001 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:100880753-100880797
64251 chr12 57560805 57560805 1 + C G HNSC 57560805 + 57560785 57560825 41 TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTCG TGGATGACGACTGTGGGGACGGCTCTGATGAGTCTGCTTCG Direct Loss 1 0.0569378269917331 1 0.419802010059357 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57560805 chr12:57560805 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1002 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:57560794-57560822
64251 chrX 153008774 153008774 1 + C T HNSC 153008774 + 153008754 153008794 41 GACGCGGGCATTGCCCTGCTCTCCATCACCCACCGGCCCTC GACGCGGGCATTGCCCTGCTTTCCATCACCCACCGGCCCTC Direct Loss 1 0.783946152816668 1 0.475127518177032 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153008774 chrX:153008774 synonymous SNV . 0 21 hm5C_associated_SNPs_1003 0 0 1 PPIG POSTAR2 ENCODE chrX:153008737-153008778
64251 chr6 114181119 114181119 1 + C T HNSC 114181119 + 114181099 114181139 41 GAGCCCGGCTCGCCCACGGCCGCGGAGGGAGAGGCCGCGTC GAGCCCGGCTCGCCCACGGCTGCGGAGGGAGAGGCCGCGTC Direct Loss 1 0.948374834271589 1 0.892530620098114 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MARCKS ENSG00000155130 CDS Human other chr6:114181119 chr6:114181119 synonymous SNV . 0 21 hm5C_associated_SNPs_1004 0 0 3 NOL12 POSTAR2 ENCODE chr6:114181079-114181124
64251 chr10 16526619 16526619 1 + C G HNSC 16526619 + 16526599 16526639 41 ATTAAATCAGGAGACAGAAGCCATAAAGGAAGAACTGTTGT ATTAAATCAGGAGACAGAAGGCATAAAGGAAGAACTGTTGT Direct Loss 1 0.2515223482168 1 0.368950247764587 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTER ENSG00000165983 CDS Human protein_coding chr10:16526619 chr10:16526619 nonsynonymous SNV 0.875 4 21 hm5C_associated_SNPs_1005 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:16526619-16526620
64251 chr6 33656530 33656530 1 + C G HNSC 33656530 + 33656510 33656550 41 AACATCATCATTGCCTTCTTCTACCCTTACATGGAGGGCGC AACATCATCATTGCCTTCTTGTACCCTTACATGGAGGGCGC Direct Loss 1 0.126340367113162 1 0.187187641859055 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33656530 chr6:33656530 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_1006 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:33656523-33656554
64251 chr6 149691182 149691182 1 + C T HNSC 149691182 + 149691162 149691202 41 TTCAGGTTTTACATGACCTGCGACAAAAATTCCCTGAAGTA TTCAGGTTTTACATGACCTGTGACAAAAATTCCCTGAAGTA Direct Loss 1 0.514724382524313 1 0.1583012342453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAB2 ENSG00000055208 CDS Human protein_coding chr6:149691182 chr6:149691182 stopgain 1.000 1 21 hm5C_associated_SNPs_1009 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:149691144-149691182
64251 chr16 3712055 3712055 1 - G A HNSC 3712055 - 3712035 3712075 41 CCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAG CCCGCCACTTCCTGCGCATGTAGCAGCTGGCCAAGACCCAG Direct Loss 1 0.922136445066968 1 0.311093300580978 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712055 chr16:3712055 stopgain 1.000 1 21 hm5C_associated_SNPs_1010 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chrX 70776893 70776893 1 + C G HNSC 70776893 + 70776873 70776913 41 GAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCT GAGCCTTGCAGTGTTATACGGGTGCCATCCAAATTAATCCT Direct Loss 1 0.220598209471772 1 0.179496794939041 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70776893 chrX:70776893 nonsynonymous SNV 0.993 4 21 hm5C_associated_SNPs_1015 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70776805-70776893
64251 chr7 23339007 23339007 1 + C T HNSC 23339007 + 23338987 23339027 41 CGTGTGGCGCGGCTGCTCGCCCCACTAATGTGGCGCAGGGC CGTGTGGCGCGGCTGCTCGCTCCACTAATGTGGCGCAGGGC Direct Loss 1 0.209310125104346 1 0.483107477426529 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23339007 chr7:23339007 synonymous SNV . 0 21 hm5C_associated_SNPs_1018 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr7:23338993-23339015
64251 chr17 18220876 18220876 1 + C A HNSC 18220876 + 18220856 18220896 41 TGCTGTATTGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCC TGCTGTATTGGGAAGGAGAGAGATGGTCAGTTGGTGCTGCC Direct Loss 1 0.332414401384456 1 0.764748096466064 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18220876 chr17:18220876 nonsynonymous SNV 0.051 1 21 hm5C_associated_SNPs_1019 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:18220843-18220878
64251 chr15 89843066 89843066 1 + C T HNSC 89843066 + 89843046 89843086 41 ATACACTTCAATTCCTACTTCAGTGGAAGAGTCGGGAAAGA ATACACTTCAATTCCTACTTTAGTGGAAGAGTCGGGAAAGA Direct Loss 1 0.302524904836246 1 0.372984260320663 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89843066 chr15:89843066 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_1020 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:89843036-89843074
64251 chr11 67047163 67047163 1 + C A HNSC 67047163 + 67047143 67047183 41 AGAAGCAGGTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC AGAAGCAGGTGCCTCCGGATATCTTCCAGGTGTGTGCCTCC Direct Loss 1 0.17467016783573 1 0.155065417289734 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047163 chr11:67047163 nonsynonymous SNV 0.972 1 21 hm5C_associated_SNPs_1021 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr4 186231908 186231908 1 + C A HNSC 186231908 + 186231888 186231928 41 GAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAG GAATCCGAATCCTGGGAGGCACTGCCTATGACCAGCAAGAG Direct Loss 1 0.084410587124423 1 0.381487369537354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX25 ENSG00000109762 CDS Human protein_coding chr4:186231908 chr4:186231908 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1025 0 0 2 UCHL5 POSTAR2 ENCODE chr4:186231809-186231948
64251 chr7 100478967 100478967 1 + C T HNSC 100478967 + 100478947 100478987 41 ATCGGGACTATGACCGGAATCGGCGAGAGCGCTTCTCGCCA ATCGGGACTATGACCGGAATTGGCGAGAGCGCTTCTCGCCA Direct Loss 1 0.879302200527488 1 0.753186583518982 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100478967 chr7:100478967 nonsynonymous SNV 0.887 3 21 hm5C_associated_SNPs_1027 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:100478907-100478975
64251 chr6 28333342 28333342 1 + C T HNSC 28333342 + 28333322 28333362 41 GAAGCTGGTGAACAGGAGGGCAGGCTACAAAGAAAGCAGAA GAAGCTGGTGAACAGGAGGGTAGGCTACAAAGAAAGCAGAA Direct Loss 1 0.520303450738447 1 0.415921449661255 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333342 chr6:28333342 synonymous SNV . 0 21 hm5C_associated_SNPs_1028 0 0 1 PPIG POSTAR2 ENCODE chr6:28333211-28333384
64251 chr9 139734271 139734271 1 + C T HNSC 139734271 + 139734251 139734291 41 AAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC AAGAATGACTCGGACCTCTTTGGGCTGGGGCTGGAGGAGGC Direct Loss 1 0.697259318793615 1 0.904609203338623 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734271 chr9:139734271 synonymous SNV . 0 21 hm5C_associated_SNPs_1031 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr10 79797023 79797023 1 + C T HNSC 79797023 + 79797003 79797043 41 AAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAA AAGAACAGAATGAAGAAAGTTAGGGGGACTGCAAAGGCCAA Direct Loss 1 0.823175203135907 1 0.802690863609314 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797023 chr10:79797023 synonymous SNV . 0 21 hm5C_associated_SNPs_1032 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr15 85164140 85164140 1 + C T HNSC 85164140 + 85164120 85164160 41 AGCCGGAAATCCCACCTCATCACACACGAGAGGACCCACAC AGCCGGAAATCCCACCTCATTACACACGAGAGGACCCACAC Direct Loss 1 0.458784797593455 1 0.60988575220108 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164140 chr15:85164140 synonymous SNV . 0 21 hm5C_associated_SNPs_1033 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:85164125-85164147
64251 chr1 213414710 213414710 1 + C G HNSC 213414710 + 213414690 213414730 41 TAAAATCAGAACCTTTGAAACCATTCTTTACTCTTCCAGAT TAAAATCAGAACCTTTGAAAGCATTCTTTACTCTTCCAGAT Direct Loss 1 0.0534547105780816 1 0.0744093656539917 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213414710 chr1:213414710 nonsynonymous SNV 0.968 0 21 hm5C_associated_SNPs_1034 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:213414700-213414720
64251 chr3 49011181 49011181 1 + C T HNSC 49011181 + 49011161 49011201 41 CCACAGACTGTGCCACAATCCGGAAATGGCTCACGAAGTGT CCACAGACTGTGCCACAATCTGGAAATGGCTCACGAAGTGT Direct Loss 1 0.830630507511833 1 0.885591149330139 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49011181 chr3:49011181 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1037 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49011128-49011237
64251 chr19 38871607 38871607 1 + C T HNSC 38871607 + 38871587 38871627 41 ATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCT ATCCCCGCCGAGAGCTACACTTTCTTCATTGACATCCTGCT Direct Loss 1 0.136780410311013 1 0.0447574853897095 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38871607 chr19:38871607 synonymous SNV . 0 21 hm5C_associated_SNPs_1038 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:38871578-38871616
64251 chr17 55194253 55194253 1 + C A HNSC 55194253 + 55194233 55194273 41 CACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTG CACCCTGCCGTTTCAGGGAGAAGAAGTCCTTCTGGACAGTG Direct Loss 1 0.511888190227776 1 0.354384303092957 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194253 chr17:55194253 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1039 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr19 50335577 50335577 1 + C T HNSC 50335577 + 50335557 50335597 41 TCCCGCAGACCACCCTGGGCCCTTTGTTCCGGAACTCAAGG TCCCGCAGACCACCCTGGGCTCTTTGTTCCGGAACTCAAGG Direct Loss 1 0.0163110537366552 1 0.0243597030639648 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50335577 chr19:50335577 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1042 0 0 11 BUD13 POSTAR2 ENCODE chr19:50335535-50335577
64251 chr4 128811293 128811293 1 + C T HNSC 128811293 + 128811273 128811313 41 GCAAGACTAGGGGTATGGAGCCACCATGGGGTTATCAGAAT GCAAGACTAGGGGTATGGAGTCACCATGGGGTTATCAGAAT Direct Loss 1 0.197565608429209 1 0.235747665166855 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811293 chr4:128811293 nonsynonymous SNV 0.397 0 21 hm5C_associated_SNPs_1043 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:128811275-128811300
64251 chr17 66251944 66251944 1 + C A KIRC 66251944 + 66251924 66251964 41 GGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCT GGAAGAAGCTGACCGGCGCCATCTAAACCTTTGCCCTATCT Direct Loss 1 0.677338534289579 1 0.588426351547241 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66251944 chr17:66251944 nonsynonymous SNV 0.956 3 21 hm5C_associated_SNPs_1046 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:66251911-66251955
64251 chr2 27459284 27459284 1 + C T KIRC 27459284 + 27459264 27459304 41 CAATGCGTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTC CAATGCGTGGAGCTGGGGGCTGGCGTCTCTCTTCCTTTGTC Direct Loss 1 0.494881814901116 1 0.582066774368286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27459284 chr2:27459284 nonsynonymous SNV 0.993 5 21 hm5C_associated_SNPs_1047 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27459280-27459301
64251 chr2 238005475 238005475 1 + C T KIRC 238005475 + 238005455 238005495 41 TTGAATTTAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAA TTGAATTTAGTTGCAGGGGCTCTGGATGTTTCCTTTAACAA Direct Loss 1 0.10775362227995 1 0.40841081738472 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COPS8 ENSG00000198612 CDS Human protein_coding chr2:238005475 chr2:238005475 synonymous SNV . 0 21 hm5C_associated_SNPs_1048 0 0 2 PRPF8 POSTAR2 ENCODE chr2:238005461-238005529
64251 chr15 64448267 64448267 1 - G A KIRC 64448267 - 64448247 64448287 41 GATGTGATCATCGCAGACTGCGGCAAGATCGAGGTGGAGAA GATGTGATCATCGCAGACTGTGGCAAGATCGAGGTGGAGAA Direct Loss 1 0.852995336127997 1 0.465864688158035 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448267 chr15:64448267 synonymous SNV . 0 21 hm5C_associated_SNPs_1049 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr17 37360793 37360793 1 + C T KIRC 37360793 + 37360773 37360813 41 ACCAGTGACCAGGCTGAGGCCCGCAGGTCTAAGACCAAGGA ACCAGTGACCAGGCTGAGGCTCGCAGGTCTAAGACCAAGGA Direct Loss 1 0.718444265860493 1 0.576197326183319 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360793 chr17:37360793 synonymous SNV . 0 21 hm5C_associated_SNPs_1051 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360846 37360846 1 + C T KIRC 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGCGCCTCCAGGTCAAGAAGGAGGAGATCATCA Direct Loss 1 0.329285252908162 1 0.40271919965744 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360846 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1052 0 0 34 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chrX 41088595 41088595 1 + C A KIRC 41088595 + 41088575 41088615 41 GAATCACTATCAAAAAAGAGCATACCAGTGTATAAAATGTA GAATCACTATCAAAAAAGAGAATACCAGTGTATAAAATGTA Direct Loss 1 0.00635390514054107 1 0.114968657493591 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41088595 chrX:41088595 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1054 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:41088575-41088602
64251 chr20 55049773 55049773 1 + C A KIRC 55049773 + 55049753 55049793 41 GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT GTCATTGAATTTCTCTTGGAAAAATCTGCAGAAAAGGCTCT Direct Loss 1 0.123831420374312 1 0.356261193752289 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049773 chr20:55049773 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1056 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:55049741-55049777
64251 chr7 103008447 103008447 1 + C T KIRC 103008447 + 103008427 103008467 41 TTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATT TTGGAAGCTGTAAATAAGGTTATTAAGTCTTATGCCAAATT Direct Loss 1 0.17846231025327 1 0.0129041075706482 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMC2 ENSG00000161057 CDS Human protein_coding chr7:103008447 chr7:103008447 synonymous SNV . 0 21 hm5C_associated_SNPs_1057 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:103008447-103008487
64251 chr6 30692126 30692126 1 + C A KIRC 30692126 + 30692106 30692146 41 CAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTT CAGCAGTACCAGGATGCCACAGCAGAAGAGGAGGAGGATTT Direct Loss 1 0.419071589879012 1 0.785240769386292 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692126 chr6:30692126 synonymous SNV . 0 21 hm5C_associated_SNPs_1059 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr4 178262698 178262698 1 + C T KIRC 178262698 + 178262678 178262718 41 CGTCCTAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTG CGTCCTAATTGTGGTCAGTGTCACTGCAGAATAACTGTGTG Direct Loss 1 0.214380106858116 1 0.152435302734375 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262698 chr4:178262698 synonymous SNV . 0 21 hm5C_associated_SNPs_1060 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:178262693-178262707
64251 chr17 37358657 37358657 1 + C T KIRP 37358657 + 37358637 37358677 41 GGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA GGCTCGATGCCGGAAAAACATCTTGGCCCGCCGGAAGGGCA Direct Loss 1 0.224464806215837 1 0.109541803598404 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358657 chr17:37358657 nonsynonymous SNV 0.995 1 21 hm5C_associated_SNPs_1061 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr8 61775123 61775123 1 + C T KIRP 61775123 + 61775103 61775143 41 CCAGATGGGTGGAGCTATGGCGCCTCCAATGAAGGATCTAC CCAGATGGGTGGAGCTATGGTGCCTCCAATGAAGGATCTAC Direct Loss 1 0.142039968572361 1 0.236138761043549 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHD7 ENSG00000171316 CDS Human protein_coding chr8:61775123 chr8:61775123 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1062 0 0 1 BUD13 POSTAR2 ENCODE chr8:61775091-61775142
64251 chr7 128407599 128407599 1 + C A KIRP 128407599 + 128407579 128407619 41 TTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAAG TTGAGTTTCGGGATAAGAACAGTGATGGGAAGATGGACAAG Direct Loss 1 0.807386905646315 1 0.569593012332916 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407599 chr7:128407599 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_1063 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr2 207175003 207175003 1 + C T LGG 207175003 + 207174983 207175023 41 GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA GTGGCCTTAGATAAACCATGTCATCGTCATCCTCCAGCAGA Direct Loss 1 0.0408630785980967 1 0.0187004804611206 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175003 chr2:207175003 synonymous SNV . 0 21 hm5C_associated_SNPs_1065 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr12 93881384 93881384 1 + C A LGG 93881384 + 93881364 93881404 41 AGGAAGGACCTATGATAGAACAACTTAGCAAAATGTTCTTT AGGAAGGACCTATGATAGAAAAACTTAGCAAAATGTTCTTT Direct Loss 1 0.528712450821994 1 0.174349009990692 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93881384 chr12:93881384 nonsynonymous SNV 0.997 0 21 hm5C_associated_SNPs_1066 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:93881279-93881394
64251 chr8 28906544 28906544 1 + C T LGG 28906544 + 28906524 28906564 41 TCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCA TCAAACAGTGATGATGTCGATGGGAATGACTACTCTGAGCA Direct Loss 1 0.935771613638352 1 0.884880006313324 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906544 chr8:28906544 synonymous SNV . 0 21 hm5C_associated_SNPs_1067 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr2 220473305 220473305 1 + C T LGG 220473305 + 220473285 220473325 41 TTCTCTTGGTCTCTCCACAGCGGAACTCTGTCGCCCCTTGT TTCTCTTGGTCTCTCCACAGTGGAACTCTGTCGCCCCTTGT Direct Loss 1 0.571369364377944 1 0.733271718025208 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STK11IP ENSG00000144589 CDS Human protein_coding chr2:220473305 chr2:220473305 nonsynonymous SNV 0.961 0 21 hm5C_associated_SNPs_1068 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:220473295-220473325
64251 chr13 77570092 77570092 1 + C T LGG 77570092 + 77570072 77570112 41 ATTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTT ATTAACTGGCAAGAACTACATAATGGAATGGTATGAACTTT Direct Loss 1 0.499687357821396 1 0.153371632099152 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570092 chr13:77570092 nonsynonymous SNV 0.967 5 21 hm5C_associated_SNPs_1069 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:77570052-77570123
64251 chrX 12838861 12838861 1 + C T LGG 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCGCCTTTGAGGTTGTTGTCGTCACAAACACAA Direct Loss 1 0.318023466721856 1 0.0488978028297424 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838861 nonsynonymous SNV 0.905 1 21 hm5C_associated_SNPs_1070 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:12838827-12838863
64251 chr15 40509802 40509802 1 + C T LGG 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGGATGTTTTTACCCTCAGTGGCTTTCGGACTGTACAGAT Direct Loss 1 0.373605747748993 1 0.476916998624802 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509802 chr15:40509802 synonymous SNV . 0 21 hm5C_associated_SNPs_1071 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr19 17424890 17424890 1 + C T LGG 17424890 + 17424870 17424910 41 CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGCCT CAATTTTAGTCGATTTCACGTGGACTCCGTGTGCAAAGCCT Direct Loss 1 0.211689655740085 1 0.118880391120911 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424890 chr19:17424890 nonsynonymous SNV 0.431 1 21 hm5C_associated_SNPs_1073 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr19:17424875-17424904
64251 chr19 18679431 18679431 1 + C T LGG 18679431 + 18679411 18679451 41 GACAGATGACGAGGAGATGACGGGCGAATAGCCCTGCTGCC GACAGATGACGAGGAGATGATGGGCGAATAGCCCTGCTGCC Direct Loss 1 0.880860774970125 1 0.921191990375519 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679431 chr19:18679431 nonsynonymous SNV 0.003 0 21 hm5C_associated_SNPs_1074 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18679409-18679461
64251 chr7 101891755 101891755 1 + C T LGG 101891755 + 101891735 101891775 41 GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGC GGGAGTCAGGGCCAGGCGGGTGCCAGCGACTCACCCTCGGC Direct Loss 1 0.639117438295437 1 0.55613249540329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891755 chr7:101891755 synonymous SNV . 0 21 hm5C_associated_SNPs_1075 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr6 138576703 138576703 1 + C A LGG 138576703 + 138576683 138576723 41 CGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC CGTCTCCGGGAGTGTCTGACAACGGCCGAGGATCAGGCTGC Direct Loss 1 0.750721589546461 1 0.816542744636536 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF3 ENSG00000112379 CDS Human protein_coding chr6:138576703 chr6:138576703 nonsynonymous SNV 0.358 1 21 hm5C_associated_SNPs_1076 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:138576682-138576708
64251 chr1 27269155 27269155 1 + C T LGG 27269155 + 27269135 27269175 41 CCCTGATTGTAAGCAGGATACTGAGGAAGATGAGGAGGAAG CCCTGATTGTAAGCAGGATATTGAGGAAGATGAGGAGGAAG Direct Loss 1 0.588803681875048 1 0.22691684961319 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUDC ENSG00000090273 CDS Human protein_coding chr1:27269155 chr1:27269155 nonsynonymous SNV 0.409 1 21 hm5C_associated_SNPs_1078 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:27269140-27269160
64251 chr11 74329667 74329667 1 + C A LGG 74329667 + 74329647 74329687 41 AAAAGTTTGAGCAGTCACATCTTCACATGTCAAGTGAGACA AAAAGTTTGAGCAGTCACATATTCACATGTCAAGTGAGACA Direct Loss 1 0.383780341250543 1 0.108015477657318 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329667 chr11:74329667 nonsynonymous SNV 0.846 0 21 hm5C_associated_SNPs_1079 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74329649-74329675
64251 chr11 380183 380183 1 + C T LGG 380183 + 380163 380203 41 GCGCTCCGCCGGGCTGCAGGCGGGAGTGGACGCGGTAGAGG GCGCTCCGCCGGGCTGCAGGTGGGAGTGGACGCGGTAGAGG Direct Loss 1 0.919842123281043 1 0.84580671787262 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:380183 chr11:380183 nonsynonymous SNV 0.468 0 21 hm5C_associated_SNPs_1080 0 0 3 PPIG POSTAR2 ENCODE chr11:380167-380189
64251 chrX 149905115 149905115 1 + C T LGG 149905115 + 149905095 149905135 41 GTGCTTACCCAAATGCAGAACTTGTGTTCTTGGAGATCCAC GTGCTTACCCAAATGCAGAATTTGTGTTCTTGGAGATCCAC Direct Loss 1 0.146700338750771 1 0.0302834510803223 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905115 chrX:149905115 nonsynonymous SNV 0.361 3 21 hm5C_associated_SNPs_1081 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:149905104-149905139
64251 chr17 27075049 27075049 1 + C A LGG 27075049 + 27075029 27075069 41 CACCAGGGCCACCTGAATACCTGCAGCTTCAATGTCATTCC CACCAGGGCCACCTGAATACATGCAGCTTCAATGTCATTCC Direct Loss 1 0.873513228887224 1 0.0763300955295563 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075049 chr17:27075049 synonymous SNV . 0 21 hm5C_associated_SNPs_1082 0 0 12 BUD13 POSTAR2 ENCODE chr17:27074982-27075064
64251 chr19 13054427 13054427 1 + C T LGG 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGCAACGAGATGTGGGGCGTAACAAAGGTGA Direct Loss 1 0.698547071001074 1 0.386668920516968 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054427 nonsynonymous SNV 0.964 2 21 hm5C_associated_SNPs_1083 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr9 135929296 135929296 1 + C T LGG 135929296 + 135929276 135929316 41 ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCCGTTGT ATGCCAAGATTTATCAAGTCTTCGATTTCCGAATCCGTTGT Direct Loss 1 0.766827232726048 1 0.893106341362 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929296 chr9:135929296 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1084 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr9:135929280-135929300
64251 chr13 76395515 76395515 1 + C T LGG 76395515 + 76395495 76395535 41 CTTTTGCAAAAAGAGAGGACCGTGTAACAACTGAAATTCAG CTTTTGCAAAAAGAGAGGACTGTGTAACAACTGAAATTCAG Direct Loss 1 0.141981205548807 1 0.123444408178329 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76395515 chr13:76395515 nonsynonymous SNV 0.013 1 21 hm5C_associated_SNPs_1085 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:76395500-76395520
64251 chr2 233681620 233681620 1 + C T LGG 233681620 + 233681600 233681640 41 AGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGCGAAAG AGGCAGAAATGAGGGCAAAATGGGAAGAGGAAGAGCGAAAG Direct Loss 1 0.92490564517655 1 0.640946805477142 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681620 chr2:233681620 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_1086 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:233681600-233681620
64251 chr12 123286229 123286229 1 + C A LGG 123286229 + 123286209 123286249 41 GGCGAAAGTGGCATGTGTGACTCCAAGTGCTGCCACCCGAG GGCGAAAGTGGCATGTGTGAATCCAAGTGCTGCCACCCGAG Direct Loss 1 0.900629939987292 1 0.914044439792633 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CCDC62 ENSG00000130783 CDS Human protein_coding chr12:123286229 chr12:123286229 nonsynonymous SNV 0.045 0 21 hm5C_associated_SNPs_1087 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:123286205-123286245
64251 chr1 36354031 36354031 1 + C T LGG 36354031 + 36354011 36354051 41 GCCTCTTTGTCTTGTAGCTGCGGGCGCTTACCTGCCCCCCC GCCTCTTTGTCTTGTAGCTGTGGGCGCTTACCTGCCCCCCC Direct Loss 1 0.736420449438909 1 0.950195133686066 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36354031 chr1:36354031 nonsynonymous SNV 0.973 0 21 hm5C_associated_SNPs_1088 0 0 4 METAP2 POSTAR2 ENCODE chr1:36354029-36354094
64251 chr18 13056654 13056654 1 + C T LIHC 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTGTTGGTACAAATTGTGGAATTGAACCATGGGA Direct Loss 1 0.314572355087308 1 0.096413254737854 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056654 synonymous SNV . 0 21 hm5C_associated_SNPs_1090 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr1 26142138 26142138 1 + C A LIHC 26142138 + 26142118 26142158 41 TCTCATCCACCTTTGAAGACCCGTCCACGGCCACCTACATG TCTCATCCACCTTTGAAGACACGTCCACGGCCACCTACATG Direct Loss 1 0.0284104088816597 1 0.207869619131088 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26142138 chr1:26142138 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_1093 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:26142107-26142143
64251 chr20 18462420 18462420 1 + C T LIHC 18462420 + 18462400 18462440 41 CAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCT CAATCCAATCATCCCTCCCATAGGTTTGGTCCGGGCACCCT Direct Loss 1 0.750292284069985 1 0.60378497838974 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462420 chr20:18462420 nonsynonymous SNV 0.687 2 21 hm5C_associated_SNPs_1095 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr20:18462388-18462420
64251 chr3 4856235 4856235 1 + C A LIHC 4856235 + 4856215 4856255 41 TAGGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA TAGGAGATGTACTCAGGAAGACGTCCAAAGAGGTAAATTAA Direct Loss 1 0.0423176880143843 1 0.547383546829224 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4856235 chr3:4856235 nonsynonymous SNV 0.988 5 21 hm5C_associated_SNPs_1096 0 0 2 DDX24 POSTAR2 ENCODE chr3:4856217-4856241
64251 chr3 184037534 184037534 1 + C G LIHC 184037534 + 184037514 184037554 41 TCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACCAGC TCCCACTGGCGTGGCCCCCAGCCCAGTTTTGATGAACCAGC Direct Loss 1 0.631762414515619 1 0.312793642282486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037534 chr3:184037534 nonsynonymous SNV 0.972 0 21 hm5C_associated_SNPs_1097 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr5 223682 223682 1 + C T LIHC 223682 + 223662 223702 41 ATCTGCTAAAGTTTCAGATTCCGTAAGTTCATGCTTTTTGT ATCTGCTAAAGTTTCAGATTTCGTAAGTTCATGCTTTTTGT Direct Loss 1 0.184016468322851 1 0.120882093906403 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:223682 chr5:223682 nonsynonymous SNV 0.923 0 21 hm5C_associated_SNPs_1100 0 0 1 FTO POSTAR2 ENCODE chr5:223591-223683
64251 chr1 94972193 94972193 1 + C A LIHC 94972193 + 94972173 94972213 41 GCTACATTTATAGTCATTGTCGAAAGGTAAGTACGCAGGTG GCTACATTTATAGTCATTGTAGAAAGGTAAGTACGCAGGTG Direct Loss 1 0.896957395485601 1 0.679623663425446 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94972193 chr1:94972193 synonymous SNV . 0 21 hm5C_associated_SNPs_1101 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr1:94972173-94972194
64251 chr5 179263583 179263583 1 + C A LIHC 179263583 + 179263563 179263603 41 CCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGC CCAGTATTCAAAGCATCCCCAGCCGTTGTGACCACTTTTGC Direct Loss 1 0.45394613509798 1 0.155043601989746 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179263583 chr5:179263583 nonsynonymous SNV 0.007 4 21 hm5C_associated_SNPs_1102 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179263560-179263600
64251 chr13 28752020 28752020 1 + C A LIHC 28752020 + 28752000 28752040 41 AGATCCTCTAACATCACCTGCTTCATCCTTGTTTAATGACT AGATCCTCTAACATCACCTGATTCATCCTTGTTTAATGACT Direct Loss 1 0.121461492943893 1 0.253241896629333 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752020 chr13:28752020 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1105 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr7 12269401 12269401 1 + C T LIHC 12269401 + 12269381 12269421 41 AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATT AAACAGTTATTGGAAAGGCATGCTTAAACAACATAACCATT Direct Loss 1 0.2137750998538 1 0.0480413436889648 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12269401 chr7:12269401 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_1107 0 0 2 IGF2BP1 POSTAR2 ENCODE chr7:12269313-12269442
64251 chr20 49458380 49458380 1 + C T LUAD 49458380 + 49458360 49458400 41 GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGCGGAG GCTGAGCGGGACCATGGGGCTTTCCCTCAGGCCCTGCGGAG Direct Loss 1 0.304566415050823 1 0.0647402703762054 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49458380 chr20:49458380 synonymous SNV . 0 21 hm5C_associated_SNPs_1110 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49458378-49458400
64251 chr17 4905834 4905834 1 + C T LUAD 4905834 + 4905814 4905854 41 GTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGGC GTCGGGGTTCTCTGCGGGTCTGGGAGCACCCCATCCTGGGC Direct Loss 1 0.899572967625281 1 0.902289867401123 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905834 chr17:4905834 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1113 1 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4905814-4905838
64251 chr2 233671355 233671355 1 + C T LUAD 233671355 + 233671335 233671375 41 TTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTAC TTTTCTCCAGGTCCAGCTCCTCCTCCTCATATGGTAAGTAC Direct Loss 1 0.0530525730803623 1 0.0617108941078186 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671355 chr2:233671355 synonymous SNV . 0 21 hm5C_associated_SNPs_1114 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr10 112361869 112361869 1 + C T LUAD 112361869 + 112361849 112361889 41 GTTAGATAGGGGTTACAAATCAATCATGGAACTGATGAATG GTTAGATAGGGGTTACAAATTAATCATGGAACTGATGAATG Direct Loss 1 0.293507665411334 1 0.0796924531459808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361869 chr10:112361869 nonsynonymous SNV 0.839 3 21 hm5C_associated_SNPs_1115 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:112361840-112361880
64251 chr9 135947049 135947049 1 + C A LUAD 135947049 + 135947029 135947069 41 GTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCCCCC GTGCCGCCCACGGGTGACTCAGGGGCCCCCCCTGTGCCCCC Direct Loss 1 0.931386870077228 1 0.980001389980316 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947049 chr9:135947049 synonymous SNV . 0 21 hm5C_associated_SNPs_1117 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr3 184082795 184082795 1 + C G LUAD 184082795 + 184082775 184082815 41 GTGAATCTTTCAAGATGGATCTAATCTTAGATGTAAACATT GTGAATCTTTCAAGATGGATGTAATCTTAGATGTAAACATT Direct Loss 1 0.206119937976136 1 0.0324731171131134 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2H ENSG00000163882 CDS Human protein_coding chr3:184082795 chr3:184082795 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_1121 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr3:184082751-184082838
64251 chr14 24900790 24900790 1 + C T LUAD 24900790 + 24900770 24900810 41 CTGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGG CTGCCTGGCCTGGAGCACGTTAGCCCATCTGGTGCCCAGGG Direct Loss 1 0.499760389587931 1 0.390726447105408 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KHNYN ENSG00000100441 CDS Human protein_coding chr14:24900790 chr14:24900790 nonsynonymous SNV 0.911 0 21 hm5C_associated_SNPs_1125 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr14:24900789-24900790
64251 chr17 21731040 21731040 1 + C G LUAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCGGACCAGCAGAGGCTCATCTT Direct Loss 1 0.294026198938445 1 0.720039367675781 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731040 synonymous SNV . 0 21 hm5C_associated_SNPs_1126 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr5 139947246 139947246 1 + C T LUAD 139947246 + 139947226 139947266 41 GCAGGGGGCCTTCAAGTTCCCGGGAACACCCTTCCCAGTCC GCAGGGGGCCTTCAAGTTCCTGGGAACACCCTTCCCAGTCC Direct Loss 1 0.981510032320453 1 0.896500945091248 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947246 chr5:139947246 synonymous SNV . 0 21 hm5C_associated_SNPs_1128 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:139947240-139947260
64251 chr17 74554932 74554932 1 + C G LUAD 74554932 + 74554912 74554952 41 GGTATCTTTTGTGAGGAGGTCTGACTTGCTGAGGCTCAGCT GGTATCTTTTGTGAGGAGGTGTGACTTGCTGAGGCTCAGCT Direct Loss 1 0.198506483769381 1 0.28541761636734 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554932 chr17:74554932 . . 0 21 hm5C_associated_SNPs_1129 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr2 135883796 135883796 1 + C T LUAD 135883796 + 135883776 135883816 41 CCTCATCTGACCGAAGGGATCATTGTGGATAATGATGTTTA CCTCATCTGACCGAAGGGATTATTGTGGATAATGATGTTTA Direct Loss 1 0.153988088251806 1 0.0711391270160675 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135883796 chr2:135883796 synonymous SNV . 0 21 hm5C_associated_SNPs_1130 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:135883779-135883805
64251 chr13 94679996 94679996 1 + C A LUAD 94679996 + 94679976 94680016 41 TCTGCAGGTCAGCCCAACCCCAGGGTGTATCCGTGCCCTCA TCTGCAGGTCAGCCCAACCCAAGGGTGTATCCGTGCCCTCA Direct Loss 1 0.690383846044914 1 0.905043840408325 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:94679996 chr13:94679996 nonsynonymous SNV 0.991 1 21 hm5C_associated_SNPs_1132 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:94679980-94680000
64251 chr22 50277613 50277613 1 + C G LUAD 50277613 + 50277593 50277633 41 TACGACGTGGCCATGGAGGCCGTGACCCAGAGCCTCCTTTC TACGACGTGGCCATGGAGGCGGTGACCCAGAGCCTCCTTTC Direct Loss 1 0.776053168491649 1 0.267859399318695 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50277613 chr22:50277613 synonymous SNV . 0 21 hm5C_associated_SNPs_1134 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50277613-50277614
64251 chrX 73045871 73045871 1 - G A LUAD 73045871 - 73045851 73045891 41 CCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC CCTGGGACAAAGCGAGGTCCTAAGGGGACAGCCTGAACTCC Direct Loss 1 0.692312624512358 1 0.479621887207031 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045871 chrX:73045871 . . 0 21 hm5C_associated_SNPs_1135 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 106884134 106884134 1 + C A LUAD 106884134 + 106884114 106884154 41 TTCCTCCCCTCCATTTAGAGCCGGGCGCCAATCTCAGCCAA TTCCTCCCCTCCATTTAGAGACGGGCGCCAATCTCAGCCAA Direct Loss 1 0.450436972716726 1 0.760676622390747 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106884134 chrX:106884134 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1136 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:106884120-106884140
64251 chr15 40269028 40269028 1 + C G LUAD 40269028 + 40269008 40269048 41 GAGGACGAGCACGGTGGCGTCTTCTCCCAGTCCTTCCTGTA GAGGACGAGCACGGTGGCGTGTTCTCCCAGTCCTTCCTGTA Direct Loss 1 0.261288466530368 1 0.0507609844207764 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40269028 chr15:40269028 synonymous SNV . 0 21 hm5C_associated_SNPs_1138 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr15:40269024-40269035
64251 chr11 118344408 118344408 1 + C T LUAD 118344408 + 118344388 118344428 41 GTTTACCCCAGGCTCTCAGACTGAAAGAGGGAGAAATAAAG GTTTACCCCAGGCTCTCAGATTGAAAGAGGGAGAAATAAAG Direct Loss 1 0.31487665666371 1 0.273579716682434 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344408 chr11:118344408 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_1139 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:118344394-118344415
64251 chr5 37026368 37026368 1 + C G LUAD 37026368 + 37026348 37026388 41 ATTCCAGAAACTCTGGTTTACTCCAACTCCACACAATGACA ATTCCAGAAACTCTGGTTTAGTCCAACTCCACACAATGACA Direct Loss 1 0.40767413889817 1 0.914849877357483 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:37026368 chr5:37026368 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1141 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:37026336-37026374
64251 chr19 3533341 3533341 1 + C T LUAD 3533341 + 3533321 3533361 41 GATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCA GATCCTTGTCTGGAAGTACCTCTCCCTGACCCAGGTGGCCA Direct Loss 1 0.105285978425339 1 0.174369603395462 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3533341 chr19:3533341 nonsynonymous SNV 0.976 4 21 hm5C_associated_SNPs_1145 0 0 1 PPIG POSTAR2 ENCODE chr19:3533340-3533390
64251 chr11 65482191 65482191 1 + C G LUAD 65482191 + 65482171 65482211 41 GCCTCAAGTACGGCCGTAGTCTCAAGTGTCTTCAGCGTCAT GCCTCAAGTACGGCCGTAGTGTCAAGTGTCTTCAGCGTCAT Direct Loss 1 0.915453186314421 1 0.720902383327484 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KAT5 ENSG00000172977 CDS Human protein_coding chr11:65482191 chr11:65482191 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_1147 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:65482178-65482193
64251 chr18 19209061 19209061 1 + C T LUAD 19209061 + 19209041 19209081 41 GAAGAGGAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGA GAAGAGGAAGAGGAAGAGGATGTGGCCGTGGCAGAGGAAGA Direct Loss 1 0.613239235739054 1 0.40554404258728 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209061 chr18:19209061 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1149 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr3 44815917 44815917 1 + C T LUAD 44815917 + 44815897 44815937 41 CAGCGTGACAAATGGTCAGTCTAACCAACCAAGGTAAGGAG CAGCGTGACAAATGGTCAGTTTAACCAACCAAGGTAAGGAG Direct Loss 1 0.128672700722178 1 0.0905659794807434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF15 ENSG00000163808 CDS Human protein_coding chr3:44815917 chr3:44815917 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1150 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:44815887-44815923
64251 chr6 160212138 160212138 1 + C T LUAD 160212138 + 160212118 160212158 41 GGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACAG GGCTGGCGGACGGTGTTTCCTTCCCGTGAGTTCTGGCACAG Direct Loss 1 0.872480408723517 1 0.106863915920258 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212138 chr6:160212138 synonymous SNV . 0 21 hm5C_associated_SNPs_1153 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:160212120-160212140
64251 chr5 95091260 95091260 1 + C T LUAD 95091260 + 95091240 95091280 41 TGCGCTGTAAGCCATGTTTTCATGCTGCTTTTCAATGTGAA TGCGCTGTAAGCCATGTTTTTATGCTGCTTTTCAATGTGAA Direct Loss 1 0.208284856811848 1 0.182465523481369 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95091260 chr5:95091260 synonymous SNV . 0 21 hm5C_associated_SNPs_1154 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:95091234-95091273
64251 chr10 7785208 7785208 1 + C G LUAD 7785208 + 7785188 7785228 41 AAAAATCCTCAACCTGGTTTCTGACCCAGAATCAGGTAAAA AAAAATCCTCAACCTGGTTTGTGACCCAGAATCAGGTAAAA Direct Loss 1 0.130412450562733 1 0.0821137726306915 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7785208 chr10:7785208 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1156 0 0 2 RPS3 POSTAR2 ENCODE chr10:7785204-7785216
64251 chr7 66773926 66773926 1 + C T LUAD 66773926 + 66773906 66773946 41 ATACATCCTTTTGTAGGACTCGGGGGACTATCCTCTGACAG ATACATCCTTTTGTAGGACTTGGGGGACTATCCTCTGACAG Direct Loss 1 0.883736743603282 1 0.922821462154388 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control STAG3L4 ENSG00000106610 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:66773926 chr7:66773926 . . 0 21 hm5C_associated_SNPs_1158 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:66773922-66773966
64251 chr12 6979504 6979504 1 + C A LUAD 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGTGGTGCTTACCTCAAGCCCGAATTCGTGG Direct Loss 1 0.133819584445875 1 0.0371414124965668 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979504 nonsynonymous SNV 0.977 4 21 hm5C_associated_SNPs_1160 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr2 32673994 32673994 1 + C T LUAD 32673994 + 32673974 32674014 41 TGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTTTATT TGATTTATCAGATGTCCTTTTAGGTAGTGATTTCTTTTATT Direct Loss 1 0.174036463012803 1 0.316508710384369 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673994 chr2:32673994 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1161 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr7 5644976 5644976 1 + C A LUAD 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA GGCGACACTCCTGTGGACTTATTCTTCGAGTTCTGCGACTA Direct Loss 1 0.245142531795609 1 0.100330799818039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644976 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1162 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr5 169020446 169020446 1 + C G LUAD 169020446 + 169020426 169020466 41 TCATCAGAAGGAACTCCTCTCTTGTAAATCAGAGGAACTGC TCATCAGAAGGAACTCCTCTGTTGTAAATCAGAGGAACTGC Direct Loss 1 0.418886957214413 1 0.0644985139369965 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169020446 chr5:169020446 nonsynonymous SNV 0.327 1 21 hm5C_associated_SNPs_1163 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:169020418-169020446
64251 chr11 62656092 62656092 1 + C T LUAD 62656092 + 62656072 62656112 41 GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC GCCAGGCCGTGAGGAGGGCTTCCCTCTTGAGCTGGAACGCC Direct Loss 1 0.370768520943732 1 0.032557338476181 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656092 chr11:62656092 nonsynonymous SNV 0.005 3 21 hm5C_associated_SNPs_1164 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr10 89505590 89505590 1 + C T LUAD 89505590 + 89505570 89505610 41 TGTTGCCACCCTGTAACAGGCACAATGAGTTTGACTTCATC TGTTGCCACCCTGTAACAGGTACAATGAGTTTGACTTCATC Direct Loss 1 0.547886038622802 1 0.166351348161697 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89505590 chr10:89505590 nonsynonymous SNV 0.995 3 21 hm5C_associated_SNPs_1165 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:89505590-89505591
64251 chr6 20402610 20402610 1 + C T LUAD 20402610 + 20402590 20402630 41 GGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGC GGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGC Direct Loss 1 0.574642562876938 1 0.598906099796295 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402610 chr6:20402610 synonymous SNV 0.188 0 21 hm5C_associated_SNPs_1168 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 33374114 33374114 1 + C T LUAD 33374114 + 33374094 33374134 41 GAGGCCTGCAGTGTGGGGCCCCCCTCAGTCTTGTGGACCTG GAGGCCTGCAGTGTGGGGCCTCCCTCAGTCTTGTGGACCTG Direct Loss 1 0.112330024763213 1 0.0509549379348755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33374114 chr6:33374114 nonsynonymous SNV 0.729 0 21 hm5C_associated_SNPs_1170 0 0 2 PPIG POSTAR2 ENCODE chr6:33374073-33374130
64251 chr8 104066182 104066182 1 + C T LUAD 104066182 + 104066162 104066202 41 TTGTTCTTGATTCAGAGTATCTCGTCACATTACTGGTAGTA TTGTTCTTGATTCAGAGTATTTCGTCACATTACTGGTAGTA Direct Loss 1 0.412321409398684 1 0.0338768064975739 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104066182 chr8:104066182 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_1171 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104066173-104066198
64251 chr7 23221741 23221741 1 + C T LUAD 23221741 + 23221721 23221761 41 TCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTGG TCTTCCTTCAAGGCCGGTGCTGCTTTGGAGATCGGTGCTGG Direct Loss 1 0.588241269994989 1 0.0727488398551941 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221741 chr7:23221741 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1172 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr11 61106796 61106796 1 + C A LUAD 61106796 + 61106776 61106816 41 GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT GGCCTGGCCCGGGAGCAGGCACGGGCTGAAGGCATCCCGGT Direct Loss 1 0.660285733617166 1 0.709807872772217 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106796 chr11:61106796 synonymous SNV . 0 21 hm5C_associated_SNPs_1175 0 0 4 PPIG POSTAR2 ENCODE chr11:61106759-61106904
64251 chrX 107909782 107909782 1 + C A LUAD 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCGAAAAAGGCAAACCCGGTAAAGATGGTATTCCTGGACCA Direct Loss 1 0.750647366373685 1 0.733027338981628 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909782 nonsynonymous SNV 0.993 2 21 hm5C_associated_SNPs_1177 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:107909780-107909800
64251 chr18 12725465 12725465 1 + C T LUAD 12725465 + 12725445 12725485 41 ACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTCT ACCCCACAGTATCTGCCTCATGGTGGAAAATACCAAGTTCT Direct Loss 1 0.842433085887486 1 0.305108428001404 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12725465 chr18:12725465 nonsynonymous SNV 0.055 1 21 hm5C_associated_SNPs_1178 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:12725449-12725472
64251 chr10 75526854 75526854 1 + C G LUAD 75526854 + 75526834 75526874 41 TCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCA TCTTTCTATTCCATACATCCGTGCCCATTGCAGAGGCCCCA Direct Loss 1 0.206175213997306 1 0.0213345587253571 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SEC24C ENSG00000176986 CDS Human protein_coding chr10:75526854 chr10:75526854 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_1183 0 0 14 FUS POSTAR2 SRX029328 chr10:75526832-75526855
64251 chrX 107838784 107838784 1 + C T LUAD 107838784 + 107838764 107838804 41 CTGCATTGGAACTGGTATTTCAGGGCCTCCAGGTCAACCTG CTGCATTGGAACTGGTATTTTAGGGCCTCCAGGTCAACCTG Direct Loss 1 0.82695164991786 1 0.580421090126038 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107838784 chrX:107838784 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1184 0 0 2 EIF3D POSTAR2 ENCODE chrX:107838760-107838820
64251 chr5 82834788 82834788 1 + C A LUAD 82834788 + 82834768 82834808 41 CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA CATATCTGACTCAGAAGGACACAGTAGCACCATGGTCAGCA Direct Loss 1 0.0661549388960243 1 0.108339846134186 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834788 chr5:82834788 nonsynonymous SNV 0.099 2 21 hm5C_associated_SNPs_1185 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82834734-82834796
64251 chr16 3117519 3117519 1 + C T LUAD 3117519 + 3117499 3117539 41 GACCCTGGAGGGACAAGGATCCGGCCCTTTGGTGCCAACTC GACCCTGGAGGGACAAGGATTCGGCCCTTTGGTGCCAACTC Direct Loss 1 0.507443132753006 1 0.727354049682617 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL32 ENSG00000008517 CDS Human protein_coding chr16:3117519 chr16:3117519 nonsynonymous SNV 0.016 1 21 hm5C_associated_SNPs_1187 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:3117423-3117561
64251 chr16 87730243 87730243 1 + C A LUSC 87730243 + 87730223 87730263 41 TCAACATCGGAGTCGCCATTCTGTTTATTAACTTTTTCATC TCAACATCGGAGTCGCCATTATGTTTATTAACTTTTTCATC Direct Loss 1 0.14150925181937 1 0.139885574579239 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JPH3 ENSG00000154118 CDS Human protein_coding chr16:87730243 chr16:87730243 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1189 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:87730239-87730265
64251 chr17 29560175 29560175 1 + C T LUSC 29560175 + 29560155 29560195 41 TGGTCACAATGATGGGTGATCAAGGAGAACTCCCTATAGCG TGGTCACAATGATGGGTGATTAAGGAGAACTCCCTATAGCG Direct Loss 1 0.476116825392752 1 0.788607716560364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29560175 chr17:29560175 stopgain 0.999 1 21 hm5C_associated_SNPs_1190 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:29560145-29560181
64251 chr19 7676663 7676663 1 + C T LUSC 7676663 + 7676643 7676683 41 GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCT GGAGACCCTGTGCTCCTCCGTTCTGTGAGCTCGGACAGCCT Direct Loss 1 0.296255774385825 1 0.0430215895175934 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676663 chr19:7676663 synonymous SNV . 0 21 hm5C_associated_SNPs_1191 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr3 122419761 122419761 1 + C T LUSC 122419761 + 122419741 122419781 41 AATGAAGGAGGGAGGCAGCCCCGCTGGGCAGAAGTGCTTCT AATGAAGGAGGGAGGCAGCCTCGCTGGGCAGAAGTGCTTCT Direct Loss 1 0.26223372103412 1 0.131911933422089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419761 chr3:122419761 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_1193 0 0 3 FMR1 POSTAR2 ENCODE chr3:122419738-122419796
64251 chr10 17277176 17277176 1 + C A LUSC 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCACTGGAACGCCAGATGCGTGA Direct Loss 1 0.136884737937788 1 0.104858607053757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277176 synonymous SNV . 0 21 hm5C_associated_SNPs_1194 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr11 75508290 75508290 1 + C T LUSC 75508290 + 75508270 75508310 41 CATCATCGTGGTCGGGGGTGCGGCTGAGTCTCTGAGCTCCA CATCATCGTGGTCGGGGGTGTGGCTGAGTCTCTGAGCTCCA Direct Loss 1 0.511026139608812 1 0.276807725429535 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75508290 chr11:75508290 nonsynonymous SNV 0.989 3 21 hm5C_associated_SNPs_1196 0 0 1 RPS3 POSTAR2 ENCODE chr11:75508259-75508328
64251 chr7 897491 897491 1 + C A LUSC 897491 + 897471 897511 41 TGGTGAGCAGCTCCTGCCCACAGTCGAGCACCTCCAGCTGG TGGTGAGCAGCTCCTGCCCAAAGTCGAGCACCTCCAGCTGG Direct Loss 1 0.271140899219756 1 0.476319074630737 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:897491 chr7:897491 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1198 0 0 14 BUD13 POSTAR2 ENCODE chr7:897412-897523
64251 chr9 123917066 123917066 1 + C G LUSC 123917066 + 123917046 123917086 41 TAGAAAAATCACTCAAACATCATGAAGATATTGTAGATGAA TAGAAAAATCACTCAAACATGATGAAGATATTGTAGATGAA Direct Loss 1 0.318510436104774 1 0.0988101065158844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123917066 chr9:123917066 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_1199 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:123917049-123917072
64251 chr14 94568211 94568211 1 + C A LUSC 94568211 + 94568191 94568231 41 CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCGCATCCT CAGTGCCATGGGCTTCACCTAAGTAGGAATCGCCGCATCCT Direct Loss 1 0.806527836321778 1 0.585052311420441 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568211 chr14:94568211 stopgain 0.000 0 21 hm5C_associated_SNPs_1200 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr20 34458925 34458925 1 + C G LUSC 34458925 + 34458905 34458945 41 AAACACTGACAAAGACTTATCGAGGAGACGTTCCTCCAGGC AAACACTGACAAAGACTTATGGAGGAGACGTTCCTCCAGGC Direct Loss 1 0.77490721416594 1 0.930524468421936 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF20 ENSG00000025293 CDS Human protein_coding chr20:34458925 chr20:34458925 nonsynonymous SNV 0.901 2 21 hm5C_associated_SNPs_1201 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34458904-34458931
64251 chr4 502758 502758 1 + C T LUSC 502758 + 502738 502778 41 TCTGCGTTTGAAAGGAAACCCGGTGAGAATTTAGGAATGTT TCTGCGTTTGAAAGGAAACCTGGTGAGAATTTAGGAATGTT Direct Loss 1 0.219810154583354 1 0.294984221458435 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:502758 chr4:502758 synonymous SNV . 0 21 hm5C_associated_SNPs_1203 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr4:502732-502764
64251 chr2 48033370 48033370 1 + C T LUSC 48033370 + 48033350 48033390 41 TACTGCAACATTTGATGGGACGGCAATAGCAAATGCAGTTG TACTGCAACATTTGATGGGATGGCAATAGCAAATGCAGTTG Direct Loss 1 0.673797968722271 1 0.156810432672501 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48033370 chr2:48033370 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_1204 4 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:48033342-48033399
64251 chr1 28159279 28159279 1 + C T LUSC 28159279 + 28159259 28159299 41 TTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGA TTTTTCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGA Direct Loss 1 0.0854951816517655 1 0.181728780269623 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159279 chr1:28159279 synonymous SNV . 0 21 hm5C_associated_SNPs_1205 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 183091288 183091288 1 + C T LUSC 183091288 + 183091268 183091308 41 TTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTGTCCGT TTCAACTGCAGGCACCTCCTTCGATTGCCAACCCTGTCCGT Direct Loss 1 0.201766582879247 1 0.118303418159485 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091288 chr1:183091288 nonsynonymous SNV 0.940 0 21 hm5C_associated_SNPs_1206 0 0 3 LIN28B POSTAR2 ENCODE chr1:183091238-183091288
64251 chr17 78321325 78321325 1 + C T LUSC 78321325 + 78321305 78321345 41 AGACATTCTTCGAGGGGGACCAGCAGCCGGAGATTATTTTT AGACATTCTTCGAGGGGGACTAGCAGCCGGAGATTATTTTT Direct Loss 1 0.176899264881709 1 0.575370490550995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321325 chr17:78321325 stopgain 0.422 0 21 hm5C_associated_SNPs_1207 0 0 5 FMR1 POSTAR2 ENCODE chr17:78321283-78321353
64251 chr1 28159278 28159278 1 + C T LUSC 28159278 + 28159258 28159298 41 ATTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGG ATTTTTCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGG Direct Loss 1 0.214322534424859 1 0.2221959233284 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159278 chr1:28159278 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1208 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr7 128486405 128486405 1 + C T LUSC 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTCGCTGTGCCCAAGAGCTCCTTCCGAGTGGGCGTGACC Direct Loss 1 0.0241027507608868 1 0.0312554240226746 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486405 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_1209 0 0 4 FMR1 POSTAR2 ENCODE chr7:128486383-128486481
64251 chr22 29695312 29695312 1 + C T LUSC 29695312 + 29695292 29695332 41 GCTTCCTCCCGCCACCCTTTCCGCCCCCGGGTAGGTGCAGG GCTTCCTCCCGCCACCCTTTTCGCCCCCGGGTAGGTGCAGG Direct Loss 1 0.240325161264868 1 0.419913530349731 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695312 chr22:29695312 nonsynonymous SNV 0.915 3 21 hm5C_associated_SNPs_1210 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr22:29695305-29695332
64251 chr19 39215157 39215157 1 + C T LUSC 39215157 + 39215137 39215177 41 GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT GAGCACCTGCGCCGCCAGTTTGCCAGCCAGGCCAATGTTGT Direct Loss 1 0.762017480200378 1 0.532574653625488 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215157 chr19:39215157 synonymous SNV . 0 21 hm5C_associated_SNPs_1211 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr5 5462527 5462527 1 + C T LUSC 5462527 + 5462507 5462547 41 CTGTGGAGACACAGGGAGATCTGGTGGTGAGGCCCTGGCTG CTGTGGAGACACAGGGAGATTTGGTGGTGAGGCCCTGGCTG Direct Loss 1 0.802871248741676 1 0.745645701885223 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5462527 chr5:5462527 nonsynonymous SNV 0.001 2 21 hm5C_associated_SNPs_1212 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5462520-5462540
64251 chr7 87005024 87005024 1 + C T LUSC 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT CAGCATTAACTAGTGAGGAGTGAACTCGATGGGCTAAGGTT Direct Loss 1 0.163959755365899 1 0.320297718048096 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005024 stopgain 0.998 1 21 hm5C_associated_SNPs_1213 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr11 4091338 4091338 1 + C G LUSC 4091338 + 4091318 4091358 41 GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCCAAGGA GGCTGCTGGTTTGCCTATATGCAGAACCGTTACTCCAAGGA Direct Loss 1 0.680395694555547 1 0.729320526123047 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4091338 chr11:4091338 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1215 0 0 2 FMR1 POSTAR2 ENCODE chr11:4091302-4091345
64251 chr6 35285962 35285962 1 + C T LUSC 35285962 + 35285942 35285982 41 TTCGGCAGCCATCCAGATGGCGATCCGGCTGCAGGCCGAGG TTCGGCAGCCATCCAGATGGTGATCCGGCTGCAGGCCGAGG Direct Loss 1 0.0910779642122722 1 0.0572963058948517 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DEF6 ENSG00000023892 CDS Human protein_coding chr6:35285962 chr6:35285962 nonsynonymous SNV 0.981 3 21 hm5C_associated_SNPs_1217 0 0 1 ZNF622 POSTAR2 ENCODE chr6:35285949-35285963
64251 chr1 47838719 47838719 1 + C G LUSC 47838719 + 47838699 47838739 41 GACAACCTTCAAGGATGGAACAAGACCATGGATGGGAAGGC GACAACCTTCAAGGATGGAAGAAGACCATGGATGGGAAGGC Direct Loss 1 0.769367062157716 1 0.566059470176697 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838719 chr1:47838719 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_1218 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:47838666-47838734
64251 chr19 39215195 39215195 1 + C A LUSC 39215195 + 39215175 39215215 41 TGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGGCACG TGTGGGGCCCTGGATCCAGAACAAGATGGAGGTGAGGCACG Direct Loss 1 0.289182836372705 1 0.56903076171875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215195 chr19:39215195 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_1219 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 58906108 58906108 1 + C G LUSC 58906108 + 58906088 58906128 41 CTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTCCCAGCT CTGGAGCGTGTGGCCAAGTCGAACCGCTGATTTTCCCAGCT Direct Loss 1 0.407846330121659 1 0.12105917930603 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906108 chr19:58906108 synonymous SNV . 0 21 hm5C_associated_SNPs_1221 0 0 50 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 16339738 16339738 1 + C T LUSC 16339738 + 16339718 16339758 41 GTGGTCCATCAAGTCCTTCCCGGTGAGCACTCTGTCCAGAC GTGGTCCATCAAGTCCTTCCTGGTGAGCACTCTGTCCAGAC Direct Loss 1 0.561285794130054 1 0.421189814805984 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16339738 chr19:16339738 nonsynonymous SNV 0.964 4 21 hm5C_associated_SNPs_1222 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:16339726-16339764
64251 chr5 5457687 5457687 1 + C T LUSC 5457687 + 5457667 5457707 41 AGGTTTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA AGGTTTTAGTACAAAGTCATTGTGACGGTGGTAGTACTGAA Direct Loss 1 0.385187609966607 1 0.133182287216187 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5457687 chr5:5457687 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1225 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:5457678-5457717
64251 chr1 41215344 41215344 1 + C T LUSC 41215344 + 41215324 41215364 41 TTCACACAGAAGATAACAAGCGCCGGACTCTACAGGTATTA TTCACACAGAAGATAACAAGTGCCGGACTCTACAGGTATTA Direct Loss 1 0.620614642539462 1 0.24577996134758 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFYC ENSG00000066136 CDS Human protein_coding chr1:41215344 chr1:41215344 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1226 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:41215255-41215374
64251 chr14 95058452 95058452 1 + C A LUSC 95058452 + 95058432 95058472 41 AACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCA AACCAGAGCAGCGGCAGCCAAGGGGACAATATTCACTTTCA Direct Loss 1 0.900443413774491 1 0.91583526134491 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control SERPINA5 ENSG00000188488;ENSG00000273259 CDS Human other chr14:95058452 chr14:95058452 nonsynonymous SNV 0.004 4 21 hm5C_associated_SNPs_1227 0 0 5 NOL12 POSTAR2 ENCODE chr14:95058403-95058458
64251 chrX 135593020 135593020 1 + C A LUSC 135593020 + 135593000 135593040 41 CTGAGAGGATGGGAGGCTTTCCTCAATGCTCCTGAGGCCAA CTGAGAGGATGGGAGGCTTTACTCAATGCTCCTGAGGCCAA Direct Loss 1 0.547507396867613 1 0.123289585113525 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593020 chrX:135593020 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1232 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chrX:135592983-135593033
64251 chr19 54711428 54711428 1 + C T LUSC 54711428 + 54711408 54711448 41 GGGGCTGGGGCTGGAGACGACGAGGAGGAGGATTAAGTCCA GGGGCTGGGGCTGGAGACGATGAGGAGGAGGATTAAGTCCA Direct Loss 1 0.885261623975629 1 0.845866322517395 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711428 chr19:54711428 synonymous SNV . 0 21 hm5C_associated_SNPs_1233 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54711392-54711434
64251 chr1 26883509 26883509 1 + C G LUSC 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGTCGTGAGATGAAGCCACCCTTCAAGCCAGC Direct Loss 1 0.257177600237683 1 0.462681144475937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883509 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1234 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr20 62368988 62368988 1 + C T LUSC 62368988 + 62368968 62369008 41 CTCGCTGTGGGCGCTGTGCACAGCCTGCCGCAGGTAGGTCC CTCGCTGTGGGCGCTGTGCATAGCCTGCCGCAGGTAGGTCC Direct Loss 1 0.619525308885288 1 0.197488784790039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LIME1 ENSG00000203896 CDS Human protein_coding chr20:62368988 chr20:62368988 nonsynonymous SNV 0.340 2 21 hm5C_associated_SNPs_1235 0 0 3 PPIG POSTAR2 ENCODE chr20:62368959-62368995
64251 chr3 10291194 10291194 1 + C T LUSC 10291194 + 10291174 10291214 41 CCTCCAAAGGCTGCCTGATTCGGAACACTCGGGGGTTCCTG CCTCCAAAGGCTGCCTGATTTGGAACACTCGGGGGTTCCTG Direct Loss 1 0.909790619282347 1 0.673722624778748 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10291194 chr3:10291194 nonsynonymous SNV 0.169 2 21 hm5C_associated_SNPs_1236 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:10291178-10291199
64251 chr15 36989588 36989588 1 + C A LUSC 36989588 + 36989568 36989608 41 TAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACAT TAGAGAAAAACCTGTCCTTCATAGGTAAGTATTATTCACAT Direct Loss 1 0.762347565224718 1 0.247441470623016 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989588 chr15:36989588 nonsynonymous SNV 0.994 1 21 hm5C_associated_SNPs_1238 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr7 77325886 77325886 1 + C T LUSC 77325886 + 77325866 77325906 41 GCAAGCTGCAACTCTCCTCCCGGGACCCTCCGGGTTCTCTG GCAAGCTGCAACTCTCCTCCTGGGACCCTCCGGGTTCTCTG Direct Loss 1 0.943068620210356 1 0.71092814207077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77325886 chr7:77325886 nonsynonymous SNV 0.406 2 21 hm5C_associated_SNPs_1240 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:77325818-77325893
64251 chr5 134154670 134154670 1 + C T LUSC 134154670 + 134154650 134154690 41 AAGAACCCAAGGAAGGCGAGCGGAAGATTTACTTGGCAATT AAGAACCCAAGGAAGGCGAGTGGAAGATTTACTTGGCAATT Direct Loss 1 0.618373064412567 1 0.529190540313721 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134154670 chr5:134154670 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1241 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:134154658-134154687
64251 chr1 110466216 110466216 1 + C T LUSC 110466216 + 110466196 110466236 41 CCCAAGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGC CCCAAGGGACAGAGCTTTCCTCCTCCAGGCCAGGAGGGGGC Direct Loss 1 0.0996624547198607 1 0.118453174829483 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466216 chr1:110466216 nonsynonymous SNV 0.131 0 21 hm5C_associated_SNPs_1242 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr2 233671354 233671354 1 + C T LUSC 233671354 + 233671334 233671374 41 CTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTA CTTTTCTCCAGGTCCAGCTCTCCCTCCTCATATGGTAAGTA Direct Loss 1 0.0531755860955072 1 0.0821062922477722 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671354 chr2:233671354 nonsynonymous SNV 0.979 3 21 hm5C_associated_SNPs_1243 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 37458880 37458880 1 + C T LUSC 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCTGAGGTCAGGTTTGGGGCTGTTGTGTGCCGTGGCGCGCG Direct Loss 1 0.587601680162028 1 0.0919211506843567 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458880 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1244 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:37458855-37458884
64251 chr2 37475350 37475350 1 + C A LUSC 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATGAATACAAAGAAGATGGGAGAGAGA Direct Loss 1 0.394034310075219 1 0.28784304857254 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475350 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_1245 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr20 54941160 54941160 1 + C T LUSC 54941160 + 54941140 54941180 41 CCTGCAATCCTGCTGAAACTCGGATTTAAAGAGTCCCTGGT CCTGCAATCCTGCTGAAACTTGGATTTAAAGAGTCCCTGGT Direct Loss 1 0.833914023353559 1 0.605350732803345 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM210B ENSG00000124098 CDS Human protein_coding chr20:54941160 chr20:54941160 synonymous SNV . 0 21 hm5C_associated_SNPs_1247 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:54941124-54941165
64251 chr19 18961004 18961004 1 + C T LUSC 18961004 + 18960984 18961024 41 TGTCGCAACGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC TGTCGCAACGTCTTCCTCCTTGGCTTCATCCCGGCCAAAGC Direct Loss 1 0.597035688519132 1 0.466250896453857 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961004 chr19:18961004 synonymous SNV . 0 21 hm5C_associated_SNPs_1248 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:18960985-18961015
64251 chr19 39950220 39950220 1 + C G LUSC 39950220 + 39950200 39950240 41 GATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTGCTCT GATCCCAATCTGTGGACTGTGAAATGTAAGGTATGTGCTCT Direct Loss 1 0.398525692170666 1 0.464331060647964 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950220 chr19:39950220 synonymous SNV . 0 21 hm5C_associated_SNPs_1249 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr21 44450169 44450169 1 + C G LUSC 44450169 + 44450149 44450189 41 GGTGCCCTGGCCCCTGCCCACATCAGCGGGCTGGTCTTGGA GGTGCCCTGGCCCCTGCCCAGATCAGCGGGCTGGTCTTGGA Direct Loss 1 0.74205952678947 1 0.1302749812603 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44450169 chr21:44450169 nonsynonymous SNV 0.863 3 21 hm5C_associated_SNPs_1250 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr21:44450143-44450191
64251 chr2 224824686 224824686 1 + C T LUSC 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGGAGCCCTGTTACAGAGTAGTGGACCTGAGAGGACTGC Direct Loss 1 0.511025213195136 1 0.143784314393997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824686 synonymous SNV . 0 21 hm5C_associated_SNPs_1251 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr2:224824650-224824688
64251 chr1 214813977 214813977 1 + C T MESO 214813977 + 214813957 214813997 41 AATATGAGAGCCTCAGGGATCTGCTAAAATCCAAAGATGCT AATATGAGAGCCTCAGGGATTTGCTAAAATCCAAAGATGCT Direct Loss 1 0.247549749178326 1 0.295271158218384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214813977 chr1:214813977 synonymous SNV . 0 21 hm5C_associated_SNPs_1253 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214813798-214814045
64251 chr20 55093270 55093270 1 + C G MESO 55093270 + 55093250 55093290 41 ACTCACAGCTCCGCCAAGCGCTCCAAGGAGGAGTCTGCCCA ACTCACAGCTCCGCCAAGCGGTCCAAGGAGGAGTCTGCCCA Direct Loss 1 0.924755358984146 1 0.984983086585999 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55093270 chr20:55093270 synonymous SNV . 0 21 hm5C_associated_SNPs_1254 0 0 1 LARP4 POSTAR2 ENCODE chr20:55093263-55093353
64251 chr6 42957366 42957366 1 + C G OV 42957366 + 42957346 42957386 41 CAGGAGCCCCCCAAGGTTGCCAAATGCACAGCCAAGCCTAG CAGGAGCCCCCCAAGGTTGCGAAATGCACAGCCAAGCCTAG Direct Loss 1 0.238594209174716 1 0.810090363025665 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42957366 chr6:42957366 synonymous SNV . 0 21 hm5C_associated_SNPs_1256 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:42957366-42957367
64251 chr4 42020141 42020141 1 + C T OV 42020141 + 42020121 42020161 41 TTTACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACT TTTACAGCAGAAGGTATAGGTACAGAACTCAAAGCTCCACT Direct Loss 1 0.541957637350375 1 0.129466533660889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020141 chr4:42020141 synonymous SNV . 0 21 hm5C_associated_SNPs_1257 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr20 62309512 62309512 1 + C G OV 62309512 + 62309492 62309532 41 GCCCAGGGCTGAACATGGAGCTGGAAGACATTGCAAAGCTG GCCCAGGGCTGAACATGGAGGTGGAAGACATTGCAAAGCTG Direct Loss 1 0.63392882527071 1 0.698031902313232 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62309512 chr20:62309512 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_1258 0 0 2 BUD13 POSTAR2 ENCODE chr20:62309497-62309512
64251 chr2 32640607 32640607 1 + C A OV 32640607 + 32640587 32640627 41 TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGAATCC TTCATTTGTTGGTAGGACTGAGGACATGCCCTGTTGAATCC Direct Loss 1 0.118403447765287 1 0.574884951114655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640607 chr2:32640607 synonymous SNV . 0 21 hm5C_associated_SNPs_1260 0 0 19 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:32640584-32640608
64251 chr2 219269106 219269106 1 + C T OV 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGCAACTCAGCCGTGTGGATGACGTGTACTCAGTGCTCAG Direct Loss 1 0.605466684674256 1 0.0898436605930328 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269106 synonymous SNV . 0 21 hm5C_associated_SNPs_1261 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:219269089-219269112
64251 chr15 81221505 81221505 1 + C A OV 81221505 + 81221485 81221525 41 ACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC ACCATAGCGGAAGGACCCTCACTATAGGCCAGTAGGTTTGC Direct Loss 1 0.0299260335078192 1 0.763914942741394 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221505 chr15:81221505 nonsynonymous SNV 0.989 4 21 hm5C_associated_SNPs_1263 0 0 1 SRSF1 POSTAR2 ENCODE chr15:81221422-81221514
64251 chr19 49377943 49377943 1 + C T OV 49377943 + 49377923 49377963 41 ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAG ACTTCAGGGGCTGGGGATATTGACCTGGAAAAGAGACAGAG Direct Loss 1 0.663026928937403 1 0.694213211536407 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377943 chr19:49377943 stopgain 0.001 0 21 hm5C_associated_SNPs_1264 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49377919-49377944
64251 chr19 14674819 14674819 1 + C T OV 14674819 + 14674799 14674839 41 CCTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCT CCTAACAGAGTACGCGGGGCTCCTTTTCATCTACCTGCTCT Direct Loss 1 0.133968594896441 1 0.081735372543335 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674819 chr19:14674819 nonsynonymous SNV 0.988 4 21 hm5C_associated_SNPs_1265 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:14674800-14674820
64251 chr17 73486373 73486373 1 + C G OV 73486373 + 73486353 73486393 41 AGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTG AGTCCTCTGGGTTCTGGCAAGTGCCTGTGGAGAGGCCCGTG Direct Loss 1 0.445736704355554 1 0.135970622301102 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73486373 chr17:73486373 nonsynonymous SNV 0.962 1 21 hm5C_associated_SNPs_1270 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:73486354-73486392
64251 chr3 61975349 61975349 1 + C T OV 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGCTGTGGGGGCTGTCACCAGTCTCCTATTGAC Direct Loss 1 0.174189722182618 1 0.0840773284435272 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975349 nonsynonymous SNV 0.407 1 21 hm5C_associated_SNPs_1271 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr17 35413929 35413929 1 + C G OV 35413929 + 35413909 35413949 41 TGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAA TGTACCGCTCTCTTTTTGGCGAGCTCCACCCTCCCGACGAA Direct Loss 1 0.374597329136331 1 0.717602133750916 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AATF ENSG00000108270 CDS Human other chr17:35413929 chr17:35413929 nonsynonymous SNV 0.858 0 21 hm5C_associated_SNPs_1272 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35413908-35413944
64251 chr1 82372824 82372824 1 + C G OV 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTATGGTGGGACGGATGACAAGATTTGT Direct Loss 1 0.269026580148806 1 0.515969276428223 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372824 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1274 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr6 31602076 31602076 1 + C A OV 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCAGGCCCTAAGGCAGAGTCCAGAGATACA Direct Loss 1 0.441513264310534 1 0.759278833866119 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602076 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1275 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr7 76112193 76112193 1 + C T PAAD 76112193 + 76112173 76112213 41 GAACTGGCCCCGTGTCAGGCCGCTACCGCCACTCCATGACC GAACTGGCCCCGTGTCAGGCTGCTACCGCCACTCCATGACC Direct Loss 1 0.43199982323654 1 0.230578452348709 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112193 chr7:76112193 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1276 0 0 2 RBM15 POSTAR2 ENCODE chr7:76112147-76112204
64251 chr17 7750213 7750213 1 + C T PAAD 7750213 + 7750193 7750233 41 ACCACCACCACCACCACCACCACCCCTGCCTGGCCTGGCTA ACCACCACCACCACCACCACTACCCCTGCCTGGCCTGGCTA Direct Loss 1 0.115647041007358 1 0.756833910942078 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750213 chr17:7750213 nonsynonymous SNV 0.923 2 21 hm5C_associated_SNPs_1277 0 0 1 SF3B1 POSTAR2 ENCODE chr17:7750190-7750231
64251 chr3 186302256 186302256 1 + C T PAAD 186302256 + 186302236 186302276 41 TAAGATCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGG TAAGATCACCAGGCCAGGAGTGAAGCTATGGAAGAAAGGGG Direct Loss 1 0.315247973023841 1 0.430714786052704 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302256 chr3:186302256 nonsynonymous SNV 0.995 1 21 hm5C_associated_SNPs_1278 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186302222-186302257
64251 chr14 24567497 24567497 1 + C T PAAD 24567497 + 24567477 24567517 41 CTTCTCAGCGGGACACGGTACAACTCCCGCCTGGTGGGGCC CTTCTCAGCGGGACACGGTATAACTCCCGCCTGGTGGGGCC Direct Loss 1 0.600391357535952 1 0.036937803030014 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567497 chr14:24567497 stopgain 0.741 0 21 hm5C_associated_SNPs_1280 0 0 1 RPS3 POSTAR2 ENCODE chr14:24567479-24567528
64251 chr17 48185696 48185696 1 + C T PAAD 48185696 + 48185676 48185716 41 TCCGCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGAGT TCCGCAGAATGCCATGAGGGTGACTGTGGAAAGCCATGAGT Direct Loss 1 0.373627962278886 1 0.0583402216434479 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK2 ENSG00000005882 CDS Human protein_coding chr17:48185696 chr17:48185696 nonsynonymous SNV 0.987 4 21 hm5C_associated_SNPs_1281 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48185686-48185708
64251 chr9 135942552 135942552 1 + C T PAAD 135942552 + 135942532 135942572 41 AAGGTTACTGATCCCCGAGCCCTGACGCTGGCCTATAAGGT AAGGTTACTGATCCCCGAGCTCTGACGCTGGCCTATAAGGT Direct Loss 1 0.173084081242953 1 0.400818169116974 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135942552 chr9:135942552 synonymous SNV . 0 21 hm5C_associated_SNPs_1283 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr17 33900679 33900679 1 + C T PAAD 33900679 + 33900659 33900699 41 GGAGATGAAATGCAGCGATGCGATGATGAGTGAAGTAGAGC GGAGATGAAATGCAGCGATGTGATGATGAGTGAAGTAGAGC Direct Loss 1 0.382829713091685 1 0.116082608699799 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900679 chr17:33900679 . . 0 21 hm5C_associated_SNPs_1285 0 0 50 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:33900659-33900710
64251 chr6 52288769 52288769 1 + C T PAAD 52288769 + 52288749 52288789 41 AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAACGGCT AGCCTTCCACAGAAGTCAGATGCTGAGCTACAGGAACGGCT Direct Loss 1 0.268467182329738 1 0.314289271831512 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52288769 chr6:52288769 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_1286 1 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:52288765-52288786
64251 chr14 103805668 103805668 1 + C T PAAD 103805668 + 103805648 103805688 41 AATACAGGCGCCATTTCCTACGAGTAAGCAAAGTGCTCTGG AATACAGGCGCCATTTCCTATGAGTAAGCAAAGTGCTCTGG Direct Loss 1 0.47932100092666 1 0.434911072254181 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805668 chr14:103805668 stopgain 0.987 1 21 hm5C_associated_SNPs_1287 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103805525-103805669
64251 chr11 46387834 46387834 1 + C T PAAD 46387834 + 46387814 46387854 41 CTTTCTTTAGGAGACATTTCCGGGGGAAGGTGCCAGGCCCT CTTTCTTTAGGAGACATTTCTGGGGGAAGGTGCCAGGCCCT Direct Loss 1 0.828536810306663 1 0.981938362121582 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46387834 chr11:46387834 nonsynonymous SNV 0.363 1 21 hm5C_associated_SNPs_1288 0 0 3 AKAP8L POSTAR2 ENCODE chr11:46387810-46387878
64251 chr14 105179914 105179914 1 + C T PAAD 105179914 + 105179894 105179934 41 CGGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCA CGGGGGCAGCAAGGCAGCCTTCATGGATCCCCCAAGAGCCA Direct Loss 1 0.140605456212625 1 0.142610758543015 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179914 chr14:105179914 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_1289 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105179912-105179935
64251 chr17 48545740 48545740 1 + C T PAAD 48545740 + 48545720 48545760 41 AAGATGAAGAGGTTGACCAGCGGGGAGAGCAACCCCCGGGG AAGATGAAGAGGTTGACCAGTGGGGAGAGCAACCCCCGGGG Direct Loss 1 0.911029526291639 1 0.942078590393066 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHAD ENSG00000136457 CDS Human protein_coding chr17:48545740 chr17:48545740 synonymous SNV . 0 21 hm5C_associated_SNPs_1291 0 0 1 HNRNPM POSTAR2 ENCODE chr17:48545734-48545786
64251 chr7 44747498 44747498 1 + C T PAAD 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGCCGGCCGGGACCCAGTGGCTGCTCCAGCCACCGGCA Direct Loss 1 0.757796568007802 1 0.70451021194458 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747498 nonsynonymous SNV 0.983 3 21 hm5C_associated_SNPs_1292 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr19 13054419 13054419 1 + C T PAAD 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGTAACGAGACGTGGGGCGTAAC Direct Loss 1 0.630646386022579 1 0.44335526227951 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054419 synonymous SNV . 0 21 hm5C_associated_SNPs_1293 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr1 154207157 154207157 1 + C A PAAD 154207157 + 154207137 154207177 41 ATGAGGAAGGCAAAGAAAATCGAGACCGGGACAGAGACTAT ATGAGGAAGGCAAAGAAAATAGAGACCGGGACAGAGACTAT Direct Loss 1 0.894004168883005 1 0.576895833015442 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207157 chr1:154207157 synonymous SNV . 0 21 hm5C_associated_SNPs_1297 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr15 39876541 39876541 1 + C T PAAD 39876541 + 39876521 39876561 41 GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG GGCCAATGAGCTGAGGCGGCTTCCCCTATGCTATCACAACG Direct Loss 1 0.17709199589204 1 0.261710464954376 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876541 chr15:39876541 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_1298 0 0 2 BUD13 POSTAR2 ENCODE chr15:39876508-39876550
64251 chr2 231931688 231931688 1 + C A PCPG 231931688 + 231931668 231931708 41 TGCCTGAAGGAGAAAAAAAACCAATTGACCAGAGATTGGAA TGCCTGAAGGAGAAAAAAAAACAATTGACCAGAGATTGGAA Direct Loss 1 0.184048949038683 1 0.297013372182846 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931688 chr2:231931688 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1299 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr19 17688792 17688792 1 + C T PRAD 17688792 + 17688772 17688812 41 GAACACCAGCCAGGTGGAGGCGCTGGGGATCCAGATGCTGC GAACACCAGCCAGGTGGAGGTGCTGGGGATCCAGATGCTGC Direct Loss 1 0.570546287211553 1 0.517859578132629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COLGALT1 ENSG00000130309 CDS Human protein_coding chr19:17688792 chr19:17688792 nonsynonymous SNV 0.726 2 21 hm5C_associated_SNPs_1301 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17688773-17688799
64251 chr1 156105740 156105740 1 + C T PRAD 156105740 + 156105720 156105760 41 ACCTGGAGGACTCACTGGCCCGTGAGCGGGACACCAGCCGG ACCTGGAGGACTCACTGGCCTGTGAGCGGGACACCAGCCGG Direct Loss 1 0.837278862702532 1 0.399949669837952 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105740 chr1:156105740 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_1302 0 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr16 72142736 72142736 1 + C A PRAD 72142736 + 72142716 72142756 41 GAACATCCGCACAGGGATGCCCTGCCACTTGCACCCCACCA GAACATCCGCACAGGGATGCACTGCCACTTGCACCCCACCA Direct Loss 1 0.104177693526168 1 0.0731126964092255 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142736 chr16:72142736 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1304 0 0 1 DDX24 POSTAR2 ENCODE chr16:72142734-72142765
64251 chr18 19348668 19348668 1 + C T PRAD 19348668 + 19348648 19348688 41 AGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGA AGAGTGGTGCGAGGAGTGGATTGGCAGTGGGAAGATCAAGA Direct Loss 1 0.608156087466059 1 0.152094334363937 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIB1 ENSG00000101752 CDS Human protein_coding chr18:19348668 chr18:19348668 synonymous SNV . 0 21 hm5C_associated_SNPs_1306 0 0 9 TARDBP POSTAR2 DRA001158,DRS012385 chr18:19348636-19348670
64251 chr17 80895147 80895147 1 + C T PRAD 80895147 + 80895127 80895167 41 AGTGTGTGTTGTTCTTCCAGCCACCCCTTTGCTGTGAAGTT AGTGTGTGTTGTTCTTCCAGTCACCCCTTTGCTGTGAAGTT Direct Loss 1 0.016180138352586 1 0.102726101875305 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBCD ENSG00000141556 CDS Human protein_coding chr17:80895147 chr17:80895147 synonymous SNV . 0 21 hm5C_associated_SNPs_1307 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80895137-80895165
64251 chr22 38352843 38352843 1 + C T PRAD 38352843 + 38352823 38352863 41 CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGCC CTAGATGACTTGGAGAATGCTGAAGAGGTCAGTATTCAGCC Direct Loss 1 0.634045015727553 1 0.640478849411011 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352843 chr22:38352843 synonymous SNV . 0 21 hm5C_associated_SNPs_1308 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr11 581559 581559 1 + C T PRAD 581559 + 581539 581579 41 TGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCG TGTGGCCCGGAGCCCAGGGCTGGATGGACACCCACAGGTCG Direct Loss 1 0.438699400483647 1 0.774861693382263 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:581559 chr11:581559 nonsynonymous SNV 0.019 2 21 hm5C_associated_SNPs_1309 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:581511-581566
64251 chr6 30593484 30593484 1 + C T PRAD 30593484 + 30593464 30593504 41 CATCTCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCC CATCTCCAAGAAGAGAGTGGTCCCCCACCTGAGTCAATGCC Direct Loss 1 0.109816234559423 1 0.143663138151169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593484 chr6:30593484 synonymous SNV . 0 21 hm5C_associated_SNPs_1310 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30593440-30593500
64251 chr7 101845118 101845118 1 + C T PRAD 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACGGGTGGCGGGAAAGAGAAGGGCAG Direct Loss 1 0.354357096108106 1 0.498090445995331 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845118 synonymous SNV . 0 21 hm5C_associated_SNPs_1312 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr12 56527593 56527593 1 + C T PRAD 56527593 + 56527573 56527613 41 GTGGAATTGGGGAGTCTCCTCTCGACCAGATCCCCCGTCAG GTGGAATTGGGGAGTCTCCTTTCGACCAGATCCCCCGTCAG Direct Loss 1 0.915115767694989 1 0.935418605804443 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56527593 chr12:56527593 nonsynonymous SNV 0.862 3 21 hm5C_associated_SNPs_1313 0 0 8 BUD13 POSTAR2 ENCODE chr12:56527558-56527596
64251 chr5 74069862 74069862 1 + C T PRAD 74069862 + 74069842 74069882 41 GAGCGAATTGGGCCTTGTGACACAAGGAGGCAAAGTTATTT GAGCGAATTGGGCCTTGTGATACAAGGAGGCAAAGTTATTT Direct Loss 1 0.774441130533483 1 0.27702122926712 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069862 chr5:74069862 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_1314 0 0 4 AGGF1 POSTAR2 ENCODE chr5:74069682-74069886
64251 chr11 107968473 107968473 1 + C T PRAD 107968473 + 107968453 107968493 41 TTCTCAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA TTCTCAGTGAACCAGGAGTTTAGTTTAATGTAAGCTCGTTA Direct Loss 1 0.2556388667186 1 0.156720399856567 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968473 chr11:107968473 synonymous SNV . 0 21 hm5C_associated_SNPs_1315 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr5 90083965 90083965 1 + C T PRAD 90083965 + 90083945 90083985 41 GACATTGCAGACCCAGTGAGCGGGTTGTTCTATTTTGGAGA GACATTGCAGACCCAGTGAGTGGGTTGTTCTATTTTGGAGA Direct Loss 1 0.174155490764901 1 0.696872591972351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90083965 chr5:90083965 synonymous SNV . 0 21 hm5C_associated_SNPs_1316 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr5:90083960-90083980
64251 chr1 110561676 110561676 1 + C T READ 110561676 + 110561656 110561696 41 CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTGC CTCTCTTACCTTTCCAGGGTTGTCTACTCAATTTGAGCTGC Direct Loss 1 0.139739146868883 1 0.0309844017028809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561676 chr1:110561676 nonsynonymous SNV 0.993 4 21 hm5C_associated_SNPs_1317 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:110561666-110561679
64251 chr3 184104655 184104655 1 + C T READ 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACGAACGGTGATCTGTGACCTGGTGGTGTGCCCACCGCCCA Direct Loss 1 0.746877571237389 1 0.540655970573425 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104655 nonsynonymous SNV 0.768 4 21 hm5C_associated_SNPs_1318 0 0 3 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr16 57144699 57144699 1 + C T READ 57144699 + 57144679 57144719 41 GCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTG GCCCCAGCAGCGGGGGCAGCTCCCATGGGCCCCCAGTATTG Direct Loss 1 0.729322155180418 1 0.516171157360077 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144699 chr16:57144699 synonymous SNV . 0 21 hm5C_associated_SNPs_1319 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr17 39978062 39978062 1 + C T READ 39978062 + 39978042 39978082 41 CAAGGATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT CAAGGATGGCGAGGTCCCTCTGGAGGAGGTGGGTGAAGGTT Direct Loss 1 0.575076948405305 1 0.858240485191345 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978062 chr17:39978062 nonsynonymous SNV 0.256 0 21 hm5C_associated_SNPs_1321 0 0 3 BUD13 POSTAR2 ENCODE chr17:39978027-39978066
64251 chr18 77728106 77728106 1 + C T READ 77728106 + 77728086 77728126 41 TACTGGAAGAAATGGGAAATCGCATTGAGGACTTACAGAAG TACTGGAAGAAATGGGAAATTGCATTGAGGACTTACAGAAG Direct Loss 1 0.644550140641949 1 0.28805810213089 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 CDS Human protein_coding chr18:77728106 chr18:77728106 nonsynonymous SNV 0.647 2 21 hm5C_associated_SNPs_1322 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:77728080-77728115
64251 chr17 45757956 45757956 1 + C T READ 45757956 + 45757936 45757976 41 ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACAAA ATGAATTGTTAACTGAAGGGTGGAGATCGAAGACTAACAAA Direct Loss 1 0.403506637664362 1 0.430103600025177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757956 chr17:45757956 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_1323 0 0 58 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr5 141524180 141524180 1 + C T READ 141524180 + 141524160 141524200 41 TTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTC TTATCAATTATGCAAAAGTTTGGAAGATGCCAGAAACTTTC Direct Loss 1 0.824331971629749 1 0.500275254249573 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control NDFIP1 ENSG00000131507 CDS Human protein_coding chr5:141524180 chr5:141524180 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1324 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:141524157-141524185
64251 chr17 20163528 20163528 1 + C T READ 20163528 + 20163508 20163548 41 GGAAAGAAAAGACCCTCTGGCAGCCTTGGCCCGGGAATACG GGAAAGAAAAGACCCTCTGGTAGCCTTGGCCCGGGAATACG Direct Loss 1 0.257360711224748 1 0.0850450694561005 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20163528 chr17:20163528 nonsynonymous SNV 0.986 1 21 hm5C_associated_SNPs_1326 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20163518-20163539
64251 chr22 43558927 43558927 1 + C T READ 43558927 + 43558907 43558947 41 CCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTGCG CCTGGCCTGGCTGGCCTTCATGACCACACTCAACTACTGCG Direct Loss 1 0.598583190798923 1 0.10034766793251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558927 chr22:43558927 nonsynonymous SNV 0.028 2 21 hm5C_associated_SNPs_1327 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr1 10221247 10221247 1 + C T READ 10221247 + 10221227 10221267 41 AAACATGTTGATAAACGACACGACGTTTTTGCTCGATGAAA AAACATGTTGATAAACGACATGACGTTTTTGCTCGATGAAA Direct Loss 1 0.329368384836114 1 0.0386607646942139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10221247 chr1:10221247 nonsynonymous SNV 0.922 4 21 hm5C_associated_SNPs_1328 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:10221247-10221248
64251 chr1 949655 949655 1 + C T SARC 949655 + 949635 949675 41 GCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCC GCAGCAGCACCTACGAGGTATGGCTGACGCAGACCGTGGCC Direct Loss 1 0.656147643259623 1 0.258842915296555 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ISG15 ENSG00000187608 CDS Human protein_coding chr1:949655 chr1:949655 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1329 0 0 2 RPS3 POSTAR2 ENCODE chr1:949611-949663
64251 chr1 171763629 171763629 1 + C G SARC 171763629 + 171763609 171763649 41 CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTTAAAA CCCAGCATTTGTGGAGCAATGTTTTCTACAGAAGGTTAAAA Direct Loss 1 0.157840957449444 1 0.0664485692977905 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763629 chr1:171763629 nonsynonymous SNV 0.712 0 21 hm5C_associated_SNPs_1330 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:171763613-171763638
64251 chr17 6547819 6547819 1 - G T SARC 6547819 - 6547799 6547839 41 TTCAGCAAGCCTTGGCAGAGCAGCAACAGCAAAATAACACA TTCAGCAAGCCTTGGCAGAGAAGCAACAGCAAAATAACACA Direct Loss 1 0.797053065124518 1 0.400581568479538 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED31 ENSG00000108590 CDS Human protein_coding chr17:6547819 chr17:6547819 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1332 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:6547808-6547863
64251 chr16 56362604 56362604 1 + C T SARC 56362604 + 56362584 56362624 41 AGACACCGAGCCCTTCTCTGCAGAGCTGCTTTCTGCCATGA AGACACCGAGCCCTTCTCTGTAGAGCTGCTTTCTGCCATGA Direct Loss 1 0.485885414480482 1 0.680529356002808 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control GNAO1 ENSG00000087258 CDS Human protein_coding chr16:56362604 chr16:56362604 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1333 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:56362591-56362618
64251 chr11 57575904 57575904 1 + C G SARC 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGCGTCAAGAGAAGGCTGTTTCTGCCATAGCTGACCTC Direct Loss 1 0.0875902455760139 1 0.0825532674789429 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575904 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1334 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:57575868-57575904
64251 chr2 27900703 27900703 1 + C A SARC 27900703 + 27900683 27900723 41 TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAGG TGTCCCGGAAGAAACTTCACATGAGAACTTTTGAACTGAGG Direct Loss 1 0.264613948357196 1 0.348716080188751 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900703 chr2:27900703 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1335 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27900681-27900730
64251 chr1 86048585 86048585 1 + C T SARC 86048585 + 86048565 86048605 41 GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACA GGACTGTGAAGATGCGGTTCTGCTGCGAAGATGGGGAGACA Direct Loss 1 0.456635024843516 1 0.121239632368088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048585 chr1:86048585 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1337 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr12 94072703 94072703 1 + C A SARC 94072703 + 94072683 94072723 41 AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT AATGCTCAAACCACAGGCCTACGGAAAACAATGCTCCTGCT Direct Loss 1 0.644704568345414 1 0.57828027009964 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072703 chr12:94072703 synonymous SNV . 0 21 hm5C_associated_SNPs_1338 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr12 95693942 95693942 1 + C T SARC 95693942 + 95693922 95693962 41 TCTTTTTTTTTATTTGAAGCCGTGTTGAAATCCTTGTCTCC TCTTTTTTTTTATTTGAAGCTGTGTTGAAATCCTTGTCTCC Direct Loss 1 0.248566763516695 1 0.481093972921371 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95693942 chr12:95693942 synonymous SNV . 0 21 hm5C_associated_SNPs_1339 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:95693885-95693945
64251 chr2 10925152 10925152 1 - G T SARC 10925152 - 10925132 10925172 41 GTCATTTTTCCCTAAGGGAGCTCTCTTTTGGGCGTGGCTCC GTCATTTTTCCCTAAGGGAGATCTCTTTTGGGCGTGGCTCC Direct Loss 1 0.107441410278095 1 0.242528110742569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDIA6 ENSG00000143870 CDS Human protein_coding chr2:10925152 chr2:10925152 nonsynonymous SNV 0.735 3 21 hm5C_associated_SNPs_1340 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:10925148-10925187
64251 chr9 4662858 4662858 1 + C T SARC 4662858 + 4662838 4662878 41 TGCAGGAGCGACAGCTGGGCCGGGCGCGAGGTGCTGATGAA TGCAGGAGCGACAGCTGGGCTGGGCGCGAGGTGCTGATGAA Direct Loss 1 0.849451017056329 1 0.750978529453278 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4662858 chr9:4662858 synonymous SNV . 0 21 hm5C_associated_SNPs_1342 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:4662837-4662864
64251 chr5 14482854 14482854 1 + C T SKCM 14482854 + 14482834 14482874 41 AAAGAAGGGCTTCTCCATGCCGGGATTCCTGTTTAAGAACA AAAGAAGGGCTTCTCCATGCTGGGATTCCTGTTTAAGAACA Direct Loss 1 0.566979600148413 1 0.691770434379578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14482854 chr5:14482854 nonsynonymous SNV 0.981 3 21 hm5C_associated_SNPs_1349 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:14482834-14482884
64251 chr2 70096880 70096880 1 + C T SKCM 70096880 + 70096860 70096900 41 CGTTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC CGTTGGACAGGTTTTAACTTTGGCTTCGACCTACTTGTAAC Direct Loss 1 0.579293742566328 1 0.149862945079803 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096880 chr2:70096880 synonymous SNV . 0 21 hm5C_associated_SNPs_1350 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:70096860-70096880
64251 chr6 76558070 76558070 1 + C T SKCM 76558070 + 76558050 76558090 41 TGTCTTCTTGTTTTGTAGTACCTTAAGGCAGGTTCTATGAA TGTCTTCTTGTTTTGTAGTATCTTAAGGCAGGTTCTATGAA Direct Loss 1 0.0259584204862404 1 0.0588300824165344 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MYO6 ENSG00000196586 CDS Human protein_coding chr6:76558070 chr6:76558070 synonymous SNV . 0 21 hm5C_associated_SNPs_1351 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221658 chr6:76558060-76558080
64251 chr12 123102893 123102893 1 + C T SKCM 123102893 + 123102873 123102913 41 TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAAGCGTGG TGGACTTGTTTTCACAGGTTTCCTACTTCAGCAAAGCGTGG Direct Loss 1 0.0683465680752031 1 0.0560208261013031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123102893 chr12:123102893 nonsynonymous SNV 0.733 2 21 hm5C_associated_SNPs_1352 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:123102870-123102896
64251 chr1 32620246 32620246 1 + C T SKCM 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGAGCTATAAGAACAATGTTCTAAACCCTGAAGAAATGA Direct Loss 1 0.354181946950104 1 0.08283531665802 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620246 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1353 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr11 67052452 67052452 1 + C T SKCM 67052452 + 67052432 67052472 41 GGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG GGCGGGGCGAGGGCGAGGCCTCGGTAAGGAGCCCGTGCGGG Direct Loss 1 0.487403444248833 1 0.841025352478027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052452 chr11:67052452 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_1354 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr6 7594068 7594068 1 + C A SKCM 7594068 + 7594048 7594088 41 TTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCATA TTGAGGAAAATGGGCTATACAAAAGAAGAAGAGGTACCATA Direct Loss 1 0.633762706511742 1 0.456301480531693 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594068 chr6:7594068 synonymous SNV . 0 21 hm5C_associated_SNPs_1355 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr19 49993749 49993749 1 + C T SKCM 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGGCTTTCTTCCGCAAGCGGATGAACACC Direct Loss 1 0.80149062774132 1 0.205606013536453 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993749 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1356 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr7 22896303 22896303 1 + C T SKCM 22896303 + 22896283 22896323 41 ATTAAAGGATTTACCTGAGGCCAAATTGGTATGCAGGAATT ATTAAAGGATTTACCTGAGGTCAAATTGGTATGCAGGAATT Direct Loss 1 0.394313629512239 1 0.5167356133461 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896303 chr7:22896303 . . 0 21 hm5C_associated_SNPs_1360 0 0 33 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr5 179150759 179150759 1 + C T SKCM 179150759 + 179150739 179150779 41 CTTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAA CTTCCTGTGTTCCTGGTTATTCTCTTCTGCTGTTCTGGAAA Direct Loss 1 0.140544539078258 1 0.0600076019763947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150759 chr5:179150759 synonymous SNV . 0 21 hm5C_associated_SNPs_1361 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:179150658-179150763
64251 chr2 29344282 29344282 1 + C T SKCM 29344282 + 29344262 29344302 41 TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTG TAGAGGACCTTCCAGATTTTTCATTAGAAGGAAATCCTTTG Direct Loss 1 0.0762388127197145 1 0.102319866418839 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29344282 chr2:29344282 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_1362 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr2:29344280-29344300
64251 chr12 58001367 58001367 1 + C T SKCM 58001367 + 58001347 58001387 41 AGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGT AGTACGGCACCATTGTCATCTAGTACGTCTTCCCGCCCGGT Direct Loss 1 0.489129612455931 1 0.430976182222366 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001367 chr12:58001367 stopgain 1.000 0 21 hm5C_associated_SNPs_1364 0 0 1 GRWD1 POSTAR2 ENCODE chr12:58001354-58001396
64251 chr11 65481133 65481133 1 + C T SKCM 65481133 + 65481113 65481153 41 CAGCCCCGGCCTCGGTTTTTCCCCAGGTGAGTTCCCCAAAC CAGCCCCGGCCTCGGTTTTTTCCCAGGTGAGTTCCCCAAAC Direct Loss 1 0.734217297502216 1 0.735866963863373 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KAT5 ENSG00000172977 CDS Human protein_coding chr11:65481133 chr11:65481133 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_1365 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:65481106-65481147
64251 chr16 29811295 29811295 1 + C T SKCM 29811295 + 29811275 29811315 41 CCACCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGA CCACCAGAGGCAAAGAGAGCTCGAGGCCCTGAGGAAGAGGA Direct Loss 1 0.223624593943409 1 0.744102120399475 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811295 chr16:29811295 synonymous SNV . 0 21 hm5C_associated_SNPs_1367 0 0 4 DDX24 POSTAR2 ENCODE chr16:29811257-29811316
64251 chr5 156816259 156816259 1 + C T SKCM 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCTATGTTCGAGGTCATCCTGAC Direct Loss 1 0.307444983240703 1 0.733509361743927 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816259 synonymous SNV . 0 21 hm5C_associated_SNPs_1368 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr5:156816259-156816260
64251 chr6 107100110 107100110 1 + C T SKCM 107100110 + 107100090 107100130 41 AGGATCAGATACAGGAGGATCGACCAGAAATCCTGCTGCCC AGGATCAGATACAGGAGGATTGACCAGAAATCCTGCTGCCC Direct Loss 1 0.355240859200967 1 0.134426027536392 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107100110 chr6:107100110 nonsynonymous SNV 0.992 5 21 hm5C_associated_SNPs_1369 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:107100106-107100131
64251 chr19 46878977 46878977 1 + C T SKCM 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGCGACGAGCACAAGCGCTCTGTGGTGGACTCGCTGGACAT Direct Loss 1 0.528792811875334 1 0.49897888302803 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878977 synonymous SNV . 0 21 hm5C_associated_SNPs_1371 0 0 6 GRWD1 POSTAR2 ENCODE chr19:46878904-46879006
64251 chr9 125154756 125154756 1 + C T SKCM 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAAGACCTGTCCCTACGTTTTCTTCCGTGTGCCGGATGCCA Direct Loss 1 0.017706121091707 1 0.0372163355350494 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154756 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1372 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr4 166405684 166405684 1 + C T SKCM 166405684 + 166405664 166405704 41 ACCCCAATCGGCCACCATGTCGCAAGAATGATGATGACAGC ACCCCAATCGGCCACCATGTTGCAAGAATGATGATGACAGC Direct Loss 1 0.883162954284958 1 0.505343019962311 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPE ENSG00000109472 CDS Human protein_coding chr4:166405684 chr4:166405684 nonsynonymous SNV 0.921 4 21 hm5C_associated_SNPs_1373 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr4:166405668-166405699
64251 chr3 47374698 47374698 1 + C T SKCM 47374698 + 47374678 47374718 41 ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGCTGCTG ACGACCGGGAGCAGAGGGGTTCCTACCTGCCTGAGCTGCTG Direct Loss 1 0.329480394613842 1 0.115654647350311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374698 chr3:47374698 nonsynonymous SNV 0.991 0 21 hm5C_associated_SNPs_1374 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:47374689-47374701
64251 chr12 46215264 46215264 1 + C T SKCM 46215264 + 46215244 46215284 41 GAGAAGACTGATAGAGACTTCGTTAAGGTAAATCATTTTAA GAGAAGACTGATAGAGACTTTGTTAAGGTAAATCATTTTAA Direct Loss 1 0.103776908832986 1 0.245442122220993 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID2 ENSG00000189079 CDS Human protein_coding chr12:46215264 chr12:46215264 synonymous SNV . 0 21 hm5C_associated_SNPs_1375 0 0 5 DDX24 POSTAR2 ENCODE chr12:46215214-46215269
64251 chr21 48068504 48068504 1 + C T SKCM 48068504 + 48068484 48068524 41 ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCGGCC ACTGGGATCATCAGTCTCTTTTGTGCACACTATGCGCGGCC Direct Loss 1 0.726488409469101 1 0.68402487039566 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068504 chr21:48068504 synonymous SNV 0.885 0 21 hm5C_associated_SNPs_1379 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr21 38558073 38558073 1 + C T SKCM 38558073 + 38558053 38558093 41 CTGGATCAGTCCCTTGAAATCAGGCAAATTAAGCTTAAATT CTGGATCAGTCCCTTGAAATTAGGCAAATTAAGCTTAAATT Direct Loss 1 0.277924941515754 1 0.849239468574524 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38558073 chr21:38558073 synonymous SNV . 0 21 hm5C_associated_SNPs_1380 0 0 3 BUD13 POSTAR2 ENCODE chr21:38558044-38558076
64251 chr11 65267924 65267924 1 + C T SKCM 65267924 + 65267904 65267944 41 AGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGA AGACAGCAGCAGACAGGATTTCAGGAACCAGTGTTTGATGA Direct Loss 1 0.675276255487458 1 0.710430502891541 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267924 chr11:65267924 . . 0 21 hm5C_associated_SNPs_1381 0 0 82 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr2 189458714 189458714 1 + C T SKCM 189458714 + 189458694 189458734 41 GAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGTG GAAGGCACAGTATTTTGTCTTGACCCGTTAGACAGTAGGTG Direct Loss 1 0.314051591148844 1 0.0838554799556732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458714 chr2:189458714 synonymous SNV . 0 21 hm5C_associated_SNPs_1382 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr13 27216450 27216450 1 + C A SKCM 27216450 + 27216430 27216470 41 TTGAGCCCCGGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG TTGAGCCCCGGCACTTGTGCAGGGGAGCTCTGCCTGAAGGG Direct Loss 1 0.764197671648482 1 0.850250720977783 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216450 chr13:27216450 synonymous SNV . 0 21 hm5C_associated_SNPs_1384 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr7 5643510 5643510 1 + C T SKCM 5643510 + 5643490 5643530 41 ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG ACAGGGGACTCAGAGCTCTTTCTCATGAAGCTCATCAACCG Direct Loss 1 0.347939068656125 1 0.0882543325424194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643510 chr7:5643510 synonymous SNV . 0 21 hm5C_associated_SNPs_1385 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chrX 107842027 107842027 1 + C T SKCM 107842027 + 107842007 107842047 41 CCTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGG CCTATGGGTCCCCCTGGTTTTGGCCCTCCAGGCCCAGTAGG Direct Loss 1 0.476949848769075 1 0.208345979452133 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107842027 chrX:107842027 synonymous SNV . 0 21 hm5C_associated_SNPs_1386 0 0 1 SND1 POSTAR2 ENCODE chrX:107841947-107842029
64251 chr1 201966479 201966479 1 + C T SKCM 201966479 + 201966459 201966499 41 CTTCATGCCACCGTCCTTTCCATTTGGAGGAATGGAGAACC CTTCATGCCACCGTCCTTTCTATTTGGAGGAATGGAGAACC Direct Loss 1 0.165210228505606 1 0.183404684066772 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966479 chr1:201966479 nonsynonymous SNV 0.989 4 21 hm5C_associated_SNPs_1388 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:201966449-201966484
64251 chr1 155691323 155691323 1 + C T SKCM 155691323 + 155691303 155691343 41 CCTAGGCCAAGCATGGGGATCAGCACGAGGGTCAGCACTAC CCTAGGCCAAGCATGGGGATTAGCACGAGGGTCAGCACTAC Direct Loss 1 0.828312312529778 1 0.28041535615921 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DAP3 ENSG00000132676 CDS Human protein_coding chr1:155691323 chr1:155691323 stopgain 0.958 1 21 hm5C_associated_SNPs_1389 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:155691315-155691340
64251 chr4 141300277 141300277 1 + C T SKCM 141300277 + 141300257 141300297 41 GAATTTTTCTTATTGTAGACCATTCCTCAAGAATTTTGTAT GAATTTTTCTTATTGTAGACTATTCCTCAAGAATTTTGTAT Direct Loss 1 0.0253299488124901 1 0.0668282210826874 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCOC ENSG00000153130 CDS Human protein_coding chr4:141300277 chr4:141300277 nonsynonymous SNV 0.807 0 21 hm5C_associated_SNPs_1390 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:141300266-141300277
64251 chr8 48874104 48874104 1 + C T SKCM 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATCTCCTTCTCAGAGACGTAGAGGCGA Direct Loss 1 0.162731667583226 1 0.029603898525238 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874104 synonymous SNV . 0 21 hm5C_associated_SNPs_1391 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48874044-48874106
64251 chr4 146576316 146576316 1 + C T SKCM 146576316 + 146576296 146576336 41 TAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTC TAGGTAATTCGTATTTCTGCTCGAAGTGGAGAGGGGATCTC Direct Loss 1 0.56547227077251 1 0.104354381561279 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MMAA ENSG00000151611 CDS Human protein_coding chr4:146576316 chr4:146576316 synonymous SNV . 0 21 hm5C_associated_SNPs_1392 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:146576314-146576338
64251 chr11 764334 764334 1 + C T SKCM 764334 + 764314 764354 41 CACCTGGATGAGAAGTCTTTCCGTTGGTTGCACAACGAGGA CACCTGGATGAGAAGTCTTTTCGTTGGTTGCACAACGAGGA Direct Loss 1 0.232495510834596 1 0.355035543441772 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764334 chr11:764334 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_1393 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:764301-764385
64251 chr19 42373208 42373208 1 + C T SKCM 42373208 + 42373188 42373228 41 TCATGCCCAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCC TCATGCCCAGCCACTTCAGCTGAGGCTCCAAGAGTGTGGCC Direct Loss 1 0.743098823083714 1 0.109712213277817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373208 chr19:42373208 stopgain 0.999 1 21 hm5C_associated_SNPs_1396 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr3 184042684 184042684 1 + C T SKCM 184042684 + 184042664 184042704 41 AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG AGGCAGAGGAACGAGGACGCTTGAAGGAAGAGCTGGAAGAG Direct Loss 1 0.794174330230883 1 0.527478754520416 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042684 chr3:184042684 synonymous SNV . 0 21 hm5C_associated_SNPs_1397 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr22 31985558 31985558 1 + C T SKCM 31985558 + 31985538 31985578 41 AGTGCAAGAGCAACACGTTTCCACAGGTATGTTGCGCAGCT AGTGCAAGAGCAACACGTTTTCACAGGTATGTTGCGCAGCT Direct Loss 1 0.383697301270741 1 0.492569595575333 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SFI1 ENSG00000198089 CDS Human protein_coding chr22:31985558 chr22:31985558 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_1398 0 0 8 DDX24 POSTAR2 ENCODE chr22:31985481-31985559
64251 chr16 1556245 1556245 1 + C T SKCM 1556245 + 1556225 1556265 41 GTTGTGTCTGGCAGGGTGGCCCGAGGCAGGGCCCGGCAGGC GTTGTGTCTGGCAGGGTGGCTCGAGGCAGGGCCCGGCAGGC Direct Loss 1 0.405928796218357 1 0.895409822463989 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1556245 chr16:1556245 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1400 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:1556211-1556249
64251 chr9 37424932 37424932 1 + C T SKCM 37424932 + 37424912 37424952 41 GCCCACGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAA GCCCACGGCCTGCTCTGCCTTCTCTCCGACCACGTGGACAA Direct Loss 1 0.188666545678627 1 0.0893107056617737 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424932 chr9:37424932 synonymous SNV . 0 21 hm5C_associated_SNPs_1402 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr17 27064861 27064861 1 + C T SKCM 27064861 + 27064841 27064881 41 CCCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCACTGT CCCCCGGGGACCTGTGAGGCTAGCCATCCCACCACCACTGT Direct Loss 1 0.393419093912605 1 0.104640811681747 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064861 chr17:27064861 nonsynonymous SNV 0.150 0 21 hm5C_associated_SNPs_1403 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:27064849-27064880
64251 chr16 67671679 67671679 1 + C T SKCM 67671679 + 67671659 67671699 41 AAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGA AAAGAGCCAGATGCTGAGCCTGCAGAGGGAGAGGAAGAGGA Direct Loss 1 0.477418363601504 1 0.599139392375946 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671679 chr16:67671679 synonymous SNV . 0 21 hm5C_associated_SNPs_1406 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr1 206653240 206653240 1 + C T SKCM 206653240 + 206653220 206653260 41 GGACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGCGG GGACGTCCCCAAGTTCGTCCTCAAAGTGGACCTGCAGGCGG Direct Loss 1 0.434613826388433 1 0.414059937000275 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IKBKE ENSG00000143466 CDS Human other chr1:206653240 chr1:206653240 nonsynonymous SNV 0.981 2 21 hm5C_associated_SNPs_1407 0 0 1 PPIG POSTAR2 ENCODE chr1:206653233-206653278
64251 chr1 54666050 54666050 1 + C T SKCM 54666050 + 54666030 54666070 41 GCGGAAGTCGGAGCCTCCTCCCCTGGATAGGGTGTACGAGA GCGGAAGTCGGAGCCTCCTCTCCTGGATAGGGTGTACGAGA Direct Loss 1 0.438873197843763 1 0.910993278026581 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54666050 chr1:54666050 nonsynonymous SNV 0.987 0 21 hm5C_associated_SNPs_1408 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:54666027-54666095
64251 chr2 128867287 128867287 1 + C T SKCM 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGACTTGTGAATCTGATATCCTTGAGGCTCTTCTACTGA Direct Loss 1 0.0424499182168173 1 0.088289350271225 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867287 nonsynonymous SNV 0.188 1 21 hm5C_associated_SNPs_1409 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:128867259-128867288
64251 chr17 26671537 26671537 1 + C T SKCM 26671537 + 26671517 26671557 41 AAGATGAGGAGACCTTTGAACTGCGGGACCGTGTCCGCCGC AAGATGAGGAGACCTTTGAATTGCGGGACCGTGTCCGCCGC Direct Loss 1 0.860193662204942 1 0.773239195346832 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFAIP1 ENSG00000109079 CDS Human protein_coding chr17:26671537 chr17:26671537 synonymous SNV . 0 21 hm5C_associated_SNPs_1411 0 0 1 UCHL5 POSTAR2 ENCODE chr17:26671438-26671570
64251 chr3 142840893 142840893 1 + C T SKCM 142840893 + 142840873 142840913 41 GCTGCAGACAGCCCTGCAGCCCCCTGACTGGCTGCAGGGCC GCTGCAGACAGCCCTGCAGCTCCCTGACTGGCTGCAGGGCC Direct Loss 1 0.298232014657206 1 0.196386814117432 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840893 chr3:142840893 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1413 0 0 2 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr3 157841665 157841665 1 + C T SKCM 157841665 + 157841645 157841685 41 TTTATTTCAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT TTTATTTCAGACGCAGGCATTGATCAAGCAGTAGCTCTTCT Direct Loss 1 0.108926824358992 1 0.0641433894634247 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841665 chr3:157841665 stopgain 0.997 1 21 hm5C_associated_SNPs_1414 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr7 44801091 44801091 1 + C A SKCM 44801091 + 44801071 44801111 41 CGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAGCC CGGCTGACCTTCCCTGTGCGAGATGGGGTGGTCCTGGAGCC Direct Loss 1 0.368231105261006 1 0.48869663476944 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801091 chr7:44801091 synonymous SNV . 0 21 hm5C_associated_SNPs_1416 0 0 6 DDX24 POSTAR2 ENCODE chr7:44801047-44801117
64251 chr21 45483598 45483598 1 + C T SKCM 45483598 + 45483578 45483618 41 TGCTGCTCTTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC TGCTGCTCTTCCTGCAGAGGTCGTGGGAGGTGGCCCAGCGC Direct Loss 1 0.362772008871115 1 0.4979607462883 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45483598 chr21:45483598 nonsynonymous SNV 0.985 4 21 hm5C_associated_SNPs_1417 0 0 2 PPIG POSTAR2 ENCODE chr21:45483558-45483640
64251 chr16 27374351 27374351 1 + C T SKCM 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCCTCTAGCATGGGGCAGCTGCAGCC Direct Loss 1 0.704325503219152 1 0.498818695545197 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374351 stopgain 0.177 0 21 hm5C_associated_SNPs_1418 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr2 242757827 242757827 1 + C T SKCM 242757827 + 242757807 242757847 41 GTCAGTGGGCCCCGGGAGTCCCCTCCAGCCTCCACTCCTCG GTCAGTGGGCCCCGGGAGTCTCCTCCAGCCTCCACTCCTCG Direct Loss 1 0.106916591281888 1 0.101515620946884 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NEU4 ENSG00000204099 CDS Human protein_coding chr2:242757827 chr2:242757827 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1419 0 0 2 DDX55 POSTAR2 ENCODE chr2:242757811-242757856
64251 chr4 79173606 79173606 1 + C T SKCM 79173606 + 79173586 79173626 41 CTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC CTTGCAATCATGGGGAAGTCTGATGTACCCCCCAACCATGC Direct Loss 1 0.201196947407031 1 0.410121470689774 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79173606 chr4:79173606 stopgain 0.134 0 21 hm5C_associated_SNPs_1424 1 0 2 PPIG POSTAR2 ENCODE chr4:79173589-79173706
64251 chr7 100205614 100205614 1 + C T SKCM 100205614 + 100205594 100205634 41 GAACAGAGGCCCCGTCCTTCCTCCAGAGAGCTTTGTGGTTC GAACAGAGGCCCCGTCCTTCTTCCAGAGAGCTTTGTGGTTC Direct Loss 1 0.888042216761723 1 0.946294724941254 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100205614 chr7:100205614 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_1425 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:100205596-100205634
64251 chrX 153678616 153678616 1 + C T SKCM 153678616 + 153678596 153678636 41 AAGAACAAGCACATCTTTCCCGCCAGCCGCTGGGAACCCTA AAGAACAAGCACATCTTTCCTGCCAGCCGCTGGGAACCCTA Direct Loss 1 0.870445672861953 1 0.512786865234375 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678616 chrX:153678616 synonymous SNV . 0 21 hm5C_associated_SNPs_1426 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chrX:153678600-153678620
64251 chr17 46135824 46135824 1 + C T SKCM 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACTTCTTACTCTTCAGCCCTGAGGTGGAAAGCCTGCCTGT Direct Loss 1 0.772232640675778 1 0.35894101858139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135824 synonymous SNV . 0 21 hm5C_associated_SNPs_1427 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr2 204082013 204082013 1 + C T SKCM 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCGAAAATTTTGGGGATTGAGCAAGCGGCTCAGCCAGA Direct Loss 1 0.228238185106592 1 0.263271123170853 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204082013 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1430 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr19 10893721 10893721 1 + C T SKCM 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTTTTCCTCTCCCACCCGGCCTA Direct Loss 1 0.193515247325159 1 0.101382315158844 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893721 synonymous SNV . 0 21 hm5C_associated_SNPs_1431 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr1 44056841 44056841 1 + C T SKCM 44056841 + 44056821 44056861 41 TGGCGGCCTCAGCCCTTTCTCGGAATATGCCTTCCGCGTGC TGGCGGCCTCAGCCCTTTCTTGGAATATGCCTTCCGCGTGC Direct Loss 1 0.904542516131784 1 0.859137237071991 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44056841 chr1:44056841 nonsynonymous SNV 0.946 3 21 hm5C_associated_SNPs_1432 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:44056817-44056842
64251 chr17 7479910 7479910 1 + C T SKCM 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATCGGGGGCACTAACGTGCGTGCTGAGGTGCA Direct Loss 1 0.440893743040897 1 0.153333365917206 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479910 stopgain . 0 21 hm5C_associated_SNPs_1433 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479909 7479909 1 + C T SKCM 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATCGGGGGCATCAACGTGCGTGCTGAGGTGC Direct Loss 1 0.126576888372063 1 0.192176729440689 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479909 nonsynonymous SNV 0.988 2 21 hm5C_associated_SNPs_1434 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr14 61201633 61201633 1 + C T SKCM 61201633 + 61201613 61201653 41 CACCAAATATCGGAACCCCTCCTTGAAGCTGATGGTGAATG CACCAAATATCGGAACCCCTTCTTGAAGCTGATGGTGAATG Direct Loss 1 0.128981955164248 1 0.231731861829758 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61201633 chr14:61201633 nonsynonymous SNV 0.800 3 21 hm5C_associated_SNPs_1437 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:61201580-61201640
64251 chr12 121660807 121660807 1 + C G SKCM 121660807 + 121660787 121660827 41 TGTCAAGACGTGTGAGGTGGCGGCCTGGTGCCCGGTGGAGG TGTCAAGACGTGTGAGGTGGGGGCCTGGTGCCCGGTGGAGG Direct Loss 1 0.584052614658802 1 0.574423313140869 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121660807 chr12:121660807 nonsynonymous SNV 0.934 0 21 hm5C_associated_SNPs_1439 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:121660800-121660824
64251 chr15 25223433 25223433 1 + C T SKCM 25223433 + 25223413 25223453 41 GCCAATAGGCATGCCGCCTCCGGGAATGAGACCCCCTCCAC GCCAATAGGCATGCCGCCTCTGGGAATGAGACCCCCTCCAC Direct Loss 1 0.966020224444401 1 0.969648122787476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25223433 chr15:25223433 nonsynonymous SNV 0.926 3 21 hm5C_associated_SNPs_1440 0 0 2 LARP4 POSTAR2 ENCODE chr15:25223361-25223440
64251 chr2 27455031 27455031 1 + C T SKCM 27455031 + 27455011 27455051 41 GACAGCCTTTGCCGCCAGACCTGCTGCAACAGGCCAAGTGT GACAGCCTTTGCCGCCAGACTTGCTGCAACAGGCCAAGTGT Direct Loss 1 0.301806718090815 1 0.419334918260574 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455031 chr2:27455031 synonymous SNV . 0 21 hm5C_associated_SNPs_1442 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27454984-27455032
64251 chr1 44446804 44446804 1 + C T SKCM 44446804 + 44446784 44446824 41 AGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCG AGCAGCCGGATGCCCGGGCCTACTGGGCGGGCCAGTGGCCG Direct Loss 1 0.620006740375997 1 0.0896318256855011 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446804 chr1:44446804 nonsynonymous SNV 0.986 1 21 hm5C_associated_SNPs_1443 0 0 4 CDC40 POSTAR2 ENCODE chr1:44446714-44446809
64251 chr17 30692381 30692381 1 + C T SKCM 30692381 + 30692361 30692401 41 CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAG CTGTTCCACGTCCTGGAATTTCTCCAATGACTCAAGCACAG Direct Loss 1 0.131149868318566 1 0.480494856834412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692381 chr17:30692381 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1444 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr10 129141980 129141980 1 + C T SKCM 129141980 + 129141960 129142000 41 CCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAA CCTGCAACTGGAGAATTTTTTAAGTGCCAAGAGAGCCAAAA Direct Loss 1 0.362748357207718 1 0.931800663471222 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141980 chr10:129141980 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1445 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chrX 73041549 73041549 1 - G A SKCM 73041549 - 73041529 73041569 41 TGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACTCACAG TGGCTGGGCTTTGACCTTTTTCGTTTTTAAATCACTCACAG Direct Loss 1 0.0780608614303632 1 0.107963591814041 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041549 chrX:73041549 . . 0 21 hm5C_associated_SNPs_1446 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 152958983 152958983 1 + C T SKCM 152958983 + 152958963 152959003 41 GCTGGCTTCGTGGTCTTCTCCATCCTGGGCTTCATGGCTGC GCTGGCTTCGTGGTCTTCTCTATCCTGGGCTTCATGGCTGC Direct Loss 1 0.249367225058201 1 0.756363987922668 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958983 chrX:152958983 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1447 0 0 9 BUD13 POSTAR2 ENCODE chrX:152958981-152959038
64251 chr17 65735123 65735123 1 + C T SKCM 65735123 + 65735103 65735143 41 GACATCCCAGCACAGCATATCACGGTAAGTGTTCATACAAG GACATCCCAGCACAGCATATTACGGTAAGTGTTCATACAAG Direct Loss 1 0.71198300067923 1 0.327683508396149 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735123 chr17:65735123 synonymous SNV . 0 21 hm5C_associated_SNPs_1448 0 0 4 GRWD1 POSTAR2 ENCODE chr17:65735065-65735125
64251 chr3 148714596 148714596 1 + C T SKCM 148714596 + 148714576 148714616 41 AGCACCAGACCCAGGGTGGCCTGACTGCTTCAATTCCGGAG AGCACCAGACCCAGGGTGGCTTGACTGCTTCAATTCCGGAG Direct Loss 1 0.446234167666719 1 0.447910755872726 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714596 chr3:148714596 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1450 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:148714590-148714616
64251 chr1 116929972 116929972 1 + C T SKCM 116929972 + 116929952 116929992 41 GGTCCCAACGCCCTCACTCCCCCTCCCACTACTCCTGAATG GGTCCCAACGCCCTCACTCCTCCTCCCACTACTCCTGAATG Direct Loss 1 0.0826100403651766 1 0.128065466880798 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116929972 chr1:116929972 synonymous SNV . 0 21 hm5C_associated_SNPs_1451 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:116929936-116929988
64251 chr1 150445130 150445130 1 + C T SKCM 150445130 + 150445110 150445150 41 GAGATGCACCCACTCATCTACCCTCTGTGGATCTTTCGAAC GAGATGCACCCACTCATCTATCCTCTGTGGATCTTTCGAAC Direct Loss 1 0.0324619643414245 1 0.0912310481071472 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445130 chr1:150445130 nonsynonymous SNV 0.978 0 21 hm5C_associated_SNPs_1455 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:150445115-150445136
64251 chr2 74326589 74326589 1 + C T SKCM 74326589 + 74326569 74326609 41 TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC TCCCCCGCGAGGTCCGACGCTTGCCCGAGCCTGCCAAGTCC Direct Loss 1 0.300567085668832 1 0.0501091480255127 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74326589 chr2:74326589 synonymous SNV . 0 21 hm5C_associated_SNPs_1456 0 0 1 BUD13 POSTAR2 ENCODE chr2:74326575-74326602
64251 chr20 37154672 37154672 1 + C T SKCM 37154672 + 37154652 37154692 41 GAAACGGACCCCAACAACACCCAAATGATATTAGGTTTGTA GAAACGGACCCCAACAACACTCAAATGATATTAGGTTTGTA Direct Loss 1 0.0885666212606752 1 0.63178688287735 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37154672 chr20:37154672 synonymous SNV . 0 21 hm5C_associated_SNPs_1457 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:37154599-37154673
64251 chr7 128505545 128505545 1 + C T SKCM 128505545 + 128505525 128505565 41 ATCCCCGCTGTCCTGGAGATCCCCTCCAAGGAGCACCCATA ATCCCCGCTGTCCTGGAGATTCCCTCCAAGGAGCACCCATA Direct Loss 1 0.371707231924621 1 0.551092028617859 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP6V1F ENSG00000128524 CDS Human protein_coding chr7:128505545 chr7:128505545 synonymous SNV . 0 21 hm5C_associated_SNPs_1458 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:128505501-128505557
64251 chr22 31658771 31658771 1 + C T SKCM 31658771 + 31658751 31658791 41 GGGGACACTGAGGAGACGTTCCCTAAGGTGCCACCTCCCAC GGGGACACTGAGGAGACGTTTCCTAAGGTGCCACCTCCCAC Direct Loss 1 0.392266309259072 1 0.0602766573429108 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658771 chr22:31658771 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1459 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831621 chr22:31658760-31658780
64251 chr22 24573545 24573545 1 + C T SKCM 24573545 + 24573525 24573565 41 AGTGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAG AGTGAGACTCAGCCCCTGAGTTCTCCCCCAACAGCTGCCAG Direct Loss 1 0.0936166892150745 1 0.269952356815338 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573545 chr22:24573545 synonymous SNV . 0 21 hm5C_associated_SNPs_1461 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr17 55183725 55183725 1 + C T SKCM 55183725 + 55183705 55183745 41 AAAGCCCAGGATAGAGGTGTCGAGGGAGAACTGGGCAATGA AAAGCCCAGGATAGAGGTGTTGAGGGAGAACTGGGCAATGA Direct Loss 1 0.841988818530612 1 0.564618587493896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183725 chr17:55183725 synonymous SNV . 0 21 hm5C_associated_SNPs_1462 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:55183716-55183750
64251 chr19 42839497 42839497 1 + C T SKCM 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTCGTCCTATACAACTTCTTCGCCAACACCTGGGAGTCTT Direct Loss 1 0.111563161899731 1 0.293267488479614 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839497 nonsynonymous SNV 0.749 2 21 hm5C_associated_SNPs_1465 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr19:42839480-42839500
64251 chr2 170462562 170462562 1 + C T SKCM 170462562 + 170462542 170462582 41 TCTATAGGTGAAAAGGGGACCGGGAAATCAACTCAGAAACC TCTATAGGTGAAAAGGGGACTGGGAAATCAACTCAGAAACC Direct Loss 1 0.835214828638266 1 0.761705636978149 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIG ENSG00000138398 CDS Human protein_coding chr2:170462562 chr2:170462562 synonymous SNV . 0 21 hm5C_associated_SNPs_1466 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:170462551-170462577
64251 chr3 49060174 49060174 1 + C T SKCM 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCGAAGACAGCTTTTCCTTCTTCTGGTTGCTGGAGCCC Direct Loss 1 0.379565764527607 1 0.055632472038269 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060174 nonsynonymous SNV 0.991 3 21 hm5C_associated_SNPs_1467 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:49060168-49060196
64251 chr17 4859344 4859344 1 + C T SKCM 4859344 + 4859324 4859364 41 ATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCC ATGACTTGACAGTCACCAACTCCAAGAGGATTGCCCAGGCC Direct Loss 1 0.565697161414158 1 0.755208909511566 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859344 chr17:4859344 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1468 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr8 145151587 145151587 1 + C T SKCM 145151587 + 145151567 145151607 41 TCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGCCATG TCTACTTCAACCCCTACTTTTCTGGCCAGGCCATTGCCATG Direct Loss 1 0.307776448578541 1 0.301938712596893 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151587 chr8:145151587 nonsynonymous SNV 0.971 1 21 hm5C_associated_SNPs_1469 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145151560-145151600
64251 chr17 38142926 38142926 1 + C T SKCM 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCCTATCTCCAACTCCTTGTGGTCATCTTCATGATGAA Direct Loss 1 0.381265611359635 1 0.0694875419139862 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142926 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_1470 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr11 75279855 75279855 1 + C T SKCM 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTCCTATACCGTGGGTGTTATGATGATGCACCGGACAGG Direct Loss 1 0.579027965621316 1 0.0644873678684235 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279855 synonymous SNV . 0 21 hm5C_associated_SNPs_1471 0 0 8 GEMIN5 POSTAR2 ENCODE chr11:75279823-75279875
64251 chr15 93482839 93482839 1 + C T SKCM 93482839 + 93482819 93482859 41 AACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAG AACCTCGTGTTAAAAAGCAGTCGAAGACTCAGCGTGGAAAG Direct Loss 1 0.214035338973396 1 0.0588084161281586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482839 chr15:93482839 nonsynonymous SNV 0.986 0 21 hm5C_associated_SNPs_1473 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482840 93482840 1 + C T SKCM 93482840 + 93482820 93482860 41 ACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGA ACCTCGTGTTAAAAAGCAGCTGAAGACTCAGCGTGGAAAGA Direct Loss 1 0.152545831940651 1 0.238453060388565 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482840 chr15:93482840 nonsynonymous SNV 0.987 0 21 hm5C_associated_SNPs_1474 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr1 15978205 15978205 1 + C T SKCM 15978205 + 15978185 15978225 41 GTTTCTTTCTTCCAAGTGTTCCATCGACCTGAAGAAAAATG GTTTCTTTCTTCCAAGTGTTTCATCGACCTGAAGAAAAATG Direct Loss 1 0.0330253205967002 1 0.0892181098461151 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978205 chr1:15978205 nonsynonymous SNV 0.912 2 21 hm5C_associated_SNPs_1477 0 0 2 GRWD1 POSTAR2 ENCODE chr1:15978202-15978312
64251 chr15 42059304 42059304 1 + C T SKCM 42059304 + 42059284 42059324 41 GATGCAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGC GATGCAGATGGTCAGAGTCTTAAGGTGATGCCTTGTTTGGC Direct Loss 1 0.448869905175359 1 0.458710551261902 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059304 chr15:42059304 synonymous SNV . 0 21 hm5C_associated_SNPs_1478 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:42059280-42059314
64251 chr5 64267545 64267545 1 + C T SKCM 64267545 + 64267525 64267565 41 TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCCGAAT TTTAGAGGAAGAAGCCCCTCTAGATGGTGCTGTTGCCGAAT Direct Loss 1 0.246921004161454 1 0.682821869850159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64267545 chr5:64267545 nonsynonymous SNV 0.908 0 21 hm5C_associated_SNPs_1481 0 0 2 GRWD1 POSTAR2 ENCODE chr5:64267538-64267634
64251 chr20 62373328 62373328 1 + C T SKCM 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTGACCAGTCTTCTCCGTCCACCCCGTCACC Direct Loss 1 0.0855033540997224 1 0.0271331071853638 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373328 synonymous SNV . 0 21 hm5C_associated_SNPs_1484 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr8 38899581 38899581 1 + C T SKCM 38899581 + 38899561 38899601 41 TGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG TGAAGCCTATAGTGCTCCCTTCTGTGGTAATAAGTTGGTGG Direct Loss 1 0.181472583874778 1 0.44437175989151 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899581 chr8:38899581 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_1486 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr12 52642524 52642524 1 + C T SKCM 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGCATCCGCCAGTTGCAGGAGTGCCCGCGACTGA Direct Loss 1 0.74989195285961 1 0.572395801544189 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642524 nonsynonymous SNV 0.002 2 21 hm5C_associated_SNPs_1487 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr19 39215191 39215191 1 + C T SKCM 39215191 + 39215171 39215211 41 ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG ATGTTGTGGGGCCCTGGATCTAGACCAAGATGGAGGTGAGG Direct Loss 1 0.230705730943744 1 0.47801661491394 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215191 chr19:39215191 stopgain 1.000 1 21 hm5C_associated_SNPs_1488 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr21 37785214 37785214 1 + C A SKCM 37785214 + 37785194 37785234 41 TGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCAT TGCCTTCCTGGCCATTTCTTACACGGACGGTTACTGCTCAT Direct Loss 1 0.355422907160595 1 0.0903894603252411 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785214 chr21:37785214 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_1490 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr21:37785195-37785218
64251 chr10 93751949 93751949 1 + C T SKCM 93751949 + 93751929 93751969 41 ATAATTACACTCTACAGGCACCAGAAAGCTGCCTTTGCTAT ATAATTACACTCTACAGGCATCAGAAAGCTGCCTTTGCTAT Direct Loss 1 0.381782352510246 1 0.292970269918442 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751949 chr10:93751949 synonymous SNV . 0 21 hm5C_associated_SNPs_1492 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:93751899-93751962
64251 chr14 75746585 75746585 1 + C T SKCM 75746585 + 75746565 75746605 41 TCTGTTTTGTTCTAGGACTTCTGCACGGACCTGGCCGTCTC TCTGTTTTGTTCTAGGACTTTTGCACGGACCTGGCCGTCTC Direct Loss 1 0.868534276765746 1 0.325188487768173 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746585 chr14:75746585 synonymous SNV . 0 21 hm5C_associated_SNPs_1493 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr11 65824782 65824782 1 + C T SKCM 65824782 + 65824762 65824802 41 CCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC CCCCACTCCTACAGTTTTGCTCATGGGAGCCCCTGTTCCCC Direct Loss 1 0.30212064447141 1 0.0645251274108887 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824782 chr11:65824782 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1495 0 0 8 DDX3X POSTAR2 ENCODE chr11:65824770-65824837
64251 chr2 153482014 153482014 1 + C T SKCM 153482014 + 153481994 153482034 41 CAGTGTTTAACTGGGTTGCTCTGAAGCCCAATCAGATCAAT CAGTGTTTAACTGGGTTGCTTTGAAGCCCAATCAGATCAAT Direct Loss 1 0.609817199347163 1 0.427623510360718 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153482014 chr2:153482014 synonymous SNV . 0 21 hm5C_associated_SNPs_1496 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:153482001-153482037
64251 chr16 30976366 30976366 1 + C T SKCM 30976366 + 30976346 30976386 41 CTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGT CTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAACCTGGT Direct Loss 1 0.580706908213951 1 0.779497504234314 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976366 chr16:30976366 nonsynonymous SNV 0.947 2 21 hm5C_associated_SNPs_1498 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr19 14580207 14580207 1 + C T SKCM 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCAGTGCGGGACACCCCTTTCTGGTGAACCTCTTCGGCTG Direct Loss 1 0.450721944834884 1 0.784686923027039 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580207 synonymous SNV . 0 21 hm5C_associated_SNPs_1500 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr14 72152246 72152246 1 + C T SKCM 72152246 + 72152226 72152266 41 GGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAAAG GGTGCAGAGTCCCATGACCTTGCGGCTGAATGCTGGAAAAG Direct Loss 1 0.824391973614784 1 0.672719895839691 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152246 chr14:72152246 nonsynonymous SNV 0.894 1 21 hm5C_associated_SNPs_1503 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr17 59161840 59161840 1 + C T SKCM 59161840 + 59161820 59161860 41 CATTGCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCAT CATTGCAGGATCCAGCCAGTTCGCTCTGACCCCGTCAGCAT Direct Loss 1 0.27258246630212 1 0.0906911790370941 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59161840 chr17:59161840 synonymous SNV . 0 21 hm5C_associated_SNPs_1505 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:59161820-59161850
64251 chr7 128407644 128407644 1 + C T SKCM 128407644 + 128407624 128407664 41 AGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCA AGACCAAAGACTGGATCCTTTCCTCAGACTATGATCATGCA Direct Loss 1 0.126166233538361 1 0.254524320363998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407644 chr7:128407644 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1506 0 0 23 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr17 48628471 48628471 1 + C T SKCM 48628471 + 48628451 48628491 41 CGTGCGGACCTTGCTCAATTCAGGGCTGGAGAAGCTCTTCC CGTGCGGACCTTGCTCAATTTAGGGCTGGAGAAGCTCTTCC Direct Loss 1 0.888649830323407 1 0.355765402317047 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48628471 chr17:48628471 nonsynonymous SNV 0.018 0 21 hm5C_associated_SNPs_1507 0 0 2 PPIG POSTAR2 ENCODE chr17:48628424-48628497
64251 chr16 90028230 90028230 1 + C T SKCM 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACGACCTGGCTGTGATTCCTGCACGCGTTGTACACAA Direct Loss 1 0.433099490173326 1 0.366952568292618 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028230 synonymous SNV . 0 21 hm5C_associated_SNPs_1508 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr20 42169585 42169585 1 + C T SKCM 42169585 + 42169565 42169605 41 CCCCACCAGGCAAGAATAGTCAGAGTGACCCATGTATCTGG CCCCACCAGGCAAGAATAGTTAGAGTGACCCATGTATCTGG Direct Loss 1 0.71831730131791 1 0.866810202598572 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169585 chr20:42169585 synonymous SNV . 0 21 hm5C_associated_SNPs_1509 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:42169585-42169615
64251 chr19 1440440 1440440 1 + C T SKCM 1440440 + 1440420 1440460 41 ATCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTA ATCGGGGCCACCCACTCCTCTCGCTTCATCCCTCTCAAGTA Direct Loss 1 0.244523004087097 1 0.101245164871216 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440440 chr19:1440440 synonymous SNV . 0 21 hm5C_associated_SNPs_1511 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr1 21771644 21771644 1 + C T SKCM 21771644 + 21771624 21771664 41 AGGCCCTGATGTAGAAACTTCCCCATTCGGTGCACCAAGAG AGGCCCTGATGTAGAAACTTTCCCATTCGGTGCACCAAGAG Direct Loss 1 0.467399327975751 1 0.294727206230164 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBPF3 ENSG00000142794 CDS Human protein_coding chr1:21771644 chr1:21771644 nonsynonymous SNV 0.002 2 21 hm5C_associated_SNPs_1512 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:21771637-21771667
64251 chr19 58722937 58722937 1 + C A SKCM 58722937 + 58722917 58722957 41 ATGTTACAGGAGCCAGTGACCTTCCAGGATGTGGCTGTGGA ATGTTACAGGAGCCAGTGACATTCCAGGATGTGGCTGTGGA Direct Loss 1 0.190480071666681 1 0.243223905563354 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58722937 chr19:58722937 synonymous SNV . 0 21 hm5C_associated_SNPs_1513 0 0 1 BUD13 POSTAR2 ENCODE chr19:58722908-58723034
64251 chr12 132589002 132589002 1 + C T SKCM 132589002 + 132588982 132589022 41 GCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGCA GCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCTCTGCAGCA Direct Loss 1 0.919858888873423 1 0.465875089168549 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589002 chr12:132589002 nonsynonymous SNV 0.436 3 21 hm5C_associated_SNPs_1514 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr19 11215952 11215952 1 + C T SKCM 11215952 + 11215932 11215972 41 ACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCA ACGATGGGAAGTGCATCTCTTGGCAGTTCGTCTGTGACTCA Direct Loss 1 0.796912744916317 1 0.739658236503601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11215952 chr19:11215952 nonsynonymous SNV 0.002 3 21 hm5C_associated_SNPs_1515 2 0 9 BUD13 POSTAR2 ENCODE chr19:11215846-11215955
64251 chr17 4926874 4926874 1 + C T SKCM 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCCGTCAGCCCGGCCCTCCTCGCCACCACTGTCAAGC Direct Loss 1 0.0893429394996429 1 0.0410122573375702 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926874 nonsynonymous SNV 0.029 0 21 hm5C_associated_SNPs_1516 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr7 91714906 91714906 1 + C T SKCM 91714906 + 91714886 91714926 41 CCATTCTATTCAGCAGGTTTCAGAACCTTGGCTAGAAGAGA CCATTCTATTCAGCAGGTTTTAGAACCTTGGCTAGAAGAGA Direct Loss 1 0.32114535665738 1 0.752610683441162 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714906 chr7:91714906 nonsynonymous SNV 0.835 0 21 hm5C_associated_SNPs_1519 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:91714877-91714907
64251 chr3 179341758 179341758 1 + C T SKCM 179341758 + 179341738 179341778 41 GCATGTGAGAGGAGATGGACCCTGGTATTACTATGAGACAA GCATGTGAGAGGAGATGGACTCTGGTATTACTATGAGACAA Direct Loss 1 0.558020632114167 1 0.425185561180115 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179341758 chr3:179341758 nonsynonymous SNV 0.681 3 21 hm5C_associated_SNPs_1520 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr3:179341721-179341764
64251 chr8 68007774 68007774 1 + C T SKCM 68007774 + 68007754 68007794 41 AAGAAGTGGGCATTTCCAACCTAAAACATCAAAGGTTTGCA AAGAAGTGGGCATTTCCAACTTAAAACATCAAAGGTTTGCA Direct Loss 1 0.382483112472865 1 0.296631991863251 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68007774 chr8:68007774 synonymous SNV . 0 21 hm5C_associated_SNPs_1522 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:68007760-68007780
64251 chr9 133761000 133761000 1 + C T SKCM 133761000 + 133760980 133761020 41 GGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTCA GGCGACAGCAGGCAGTGGTCTAGCGGCCACTCAGGACTTCA Direct Loss 1 0.488577633826254 1 0.739432334899902 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133761000 chr9:133761000 nonsynonymous SNV 0.019 2 21 hm5C_associated_SNPs_1527 0 0 4 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr5 71648516 71648516 1 + C G SKCM 71648516 + 71648496 71648536 41 TGGAAAACCTGATAAAGACTCTAAAAAATGCTGCAGAAGGA TGGAAAACCTGATAAAGACTGTAAAAAATGCTGCAGAAGGA Direct Loss 1 0.454887353493558 1 0.534762024879456 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71648516 chr5:71648516 nonsynonymous SNV 0.003 4 21 hm5C_associated_SNPs_1528 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:71648500-71648520
64251 chr20 44050042 44050042 1 + C T SKCM 44050042 + 44050022 44050062 41 GAGGCCCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACGT GAGGCCCCCCCAGTGCCCTTTCTGCATGCCCAGCGGTACGT Direct Loss 1 0.130357020993955 1 0.262338578701019 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44050042 chr20:44050042 synonymous SNV . 0 21 hm5C_associated_SNPs_1530 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44050025-44050054
64251 chr17 18143908 18143908 1 + C T SKCM 18143908 + 18143888 18143928 41 GCAGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAA GCAGGGGCCCACCACGGGCCTACCATGTGGGCTGGCACCAA Direct Loss 1 0.776693110815222 1 0.046777069568634 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143908 chr17:18143908 synonymous SNV . 0 21 hm5C_associated_SNPs_1531 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr8 145139185 145139185 1 + C T SKCM 145139185 + 145139165 145139205 41 CTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAAGG CTTGACCTGCTCAATCTCTTTCAGACCTTCTGCCAGAAAGG Direct Loss 1 0.533389526791618 1 0.402518838644028 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139185 chr8:145139185 synonymous SNV . 0 21 hm5C_associated_SNPs_1532 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145139180-145139200
64251 chr14 102452896 102452896 1 + C T SKCM 102452896 + 102452876 102452916 41 AACCAGCTTTACCCGTTTGCCATCTCACTGATCGAGAGCGT AACCAGCTTTACCCGTTTGCTATCTCACTGATCGAGAGCGT Direct Loss 1 0.061388877624342 1 0.119680762290955 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102452896 chr14:102452896 synonymous SNV . 0 21 hm5C_associated_SNPs_1534 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:102452880-102452900
64251 chr3 183899730 183899730 1 + C T SKCM 183899730 + 183899710 183899750 41 ACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGT ACCAAGGACATCATCCTTCCTTTCCGGGTGATCCCGCTAGT Direct Loss 1 0.283393756118923 1 0.0242071449756622 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899730 chr3:183899730 synonymous SNV . 0 21 hm5C_associated_SNPs_1535 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr2 127453565 127453565 1 + C T SKCM 127453565 + 127453545 127453585 41 GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTA GTCCTAGTCTCCCTCCTCTTTGTCATGCTGCGCTACATGTA Direct Loss 1 0.705268379990501 1 0.181394636631012 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GYPC ENSG00000136732 CDS Human protein_coding chr2:127453565 chr2:127453565 synonymous SNV . 0 21 hm5C_associated_SNPs_1536 0 0 1 LIN28B POSTAR2 ENCODE chr2:127453530-127453569
64251 chr15 79185883 79185883 1 + C T SKCM 79185883 + 79185863 79185903 41 ATATTTTTGTCTTCATAGCTCTTTTATCTTCCTGCCAAGAA ATATTTTTGTCTTCATAGCTTTTTTATCTTCCTGCCAAGAA Direct Loss 1 0.0473409962647932 1 0.0380460321903229 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79185883 chr15:79185883 synonymous SNV . 0 21 hm5C_associated_SNPs_1538 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79185863-79185887
64251 chr14 65209911 65209911 1 + C T SKCM 65209911 + 65209891 65209931 41 ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTGCTCCAAGTA ACCTTCAGCTGGCCCGACGTTCGTGAGCTCTGCTCCAAGTA Direct Loss 1 0.264721777588417 1 0.225282251834869 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209911 chr14:65209911 synonymous SNV . 0 21 hm5C_associated_SNPs_1539 0 0 1 DDX55 POSTAR2 ENCODE chr14:65209866-65209928
64251 chr19 10793360 10793360 1 + C T SKCM 10793360 + 10793340 10793380 41 CCACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAG CCACCCCTAGTGCGGCCTTTTCCTCAGATGCCACTGCCGAG Direct Loss 1 0.13740155378712 1 0.142955392599106 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793360 chr19:10793360 nonsynonymous SNV 0.589 0 21 hm5C_associated_SNPs_1541 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10793320-10793360
64251 chrX 107834422 107834422 1 + C T SKCM 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGCTCCTGGGCTTTCAGGGCCTCCTGGCCCTGCT Direct Loss 1 0.629217455919277 1 0.859161734580994 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834422 nonsynonymous SNV 0.982 2 21 hm5C_associated_SNPs_1542 0 0 3 NOL12 POSTAR2 ENCODE chrX:107834377-107834427
64251 chr1 156756594 156756594 1 + C T SKCM 156756594 + 156756574 156756614 41 CCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGC CCTGTTGTGGGCACCACAACTACCACTCCGTCGCCCTCTGC Direct Loss 1 0.857390229076676 1 0.531248986721039 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756594 chr1:156756594 synonymous SNV . 0 21 hm5C_associated_SNPs_1544 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr19 11145668 11145668 1 + C T SKCM 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGGAGGAGGACGAGCTCTCCTCGTGGATCATCAAGGAC Direct Loss 1 0.0885890459858501 1 0.127061396837234 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145668 nonsynonymous SNV 0.260 5 21 hm5C_associated_SNPs_1546 0 0 3 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr1 156756596 156756596 1 + C T SKCM 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA TGTTGTGGGCACCACAACCATCACTCCGTCGCCCTCTGCTA Direct Loss 1 0.234966352829958 1 0.190348476171494 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756596 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1548 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr19 49404083 49404083 1 + C T SKCM 49404083 + 49404063 49404103 41 TCTGGGCCCCGAGGAACCCTCCTTCTGTTGCCGCTGCTGCT TCTGGGCCCCGAGGAACCCTTCTTCTGTTGCCGCTGCTGCT Direct Loss 1 0.0302775516167121 1 0.0693960785865784 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49404083 chr19:49404083 synonymous SNV . 0 21 hm5C_associated_SNPs_1549 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:49404057-49404085
64251 chr1 44128686 44128686 1 + C T SKCM 44128686 + 44128666 44128706 41 CTTTGGCATGTGGAAGACATCCTTTGCTTGGCACACTGAAG CTTTGGCATGTGGAAGACATTCTTTGCTTGGCACACTGAAG Direct Loss 1 0.0649782967138782 1 0.129627794027328 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44128686 chr1:44128686 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_1550 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44128639-44128738
64251 chr19 14030636 14030636 1 + C T SKCM 14030636 + 14030616 14030656 41 CGACTGGCCACCCAGGCTTCCCCCCAATCCAGGGCCTGGAG CGACTGGCCACCCAGGCTTCTCCCCAATCCAGGGCCTGGAG Direct Loss 1 0.0662865741762127 1 0.047151505947113 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030636 chr19:14030636 nonsynonymous SNV 0.960 4 21 hm5C_associated_SNPs_1551 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221659 chr19:14030620-14030640
64251 chr1 109643093 109643093 1 + C T SKCM 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGGGCGCTGTGCAGCGAGGCTCCTTAGGCGGCGGCCACGCT Direct Loss 1 0.163251685250507 1 0.0724580883979797 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643093 . . 0 21 hm5C_associated_SNPs_1552 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 242030150 242030150 1 + C T SKCM 242030150 + 242030130 242030170 41 AGCCTGCCCATTCAAGAAGTCATAGTTGGGATGACAAAACA AGCCTGCCCATTCAAGAAGTTATAGTTGGGATGACAAAACA Direct Loss 1 0.252250202996228 1 0.0461404323577881 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242030150 chr1:242030150 nonsynonymous SNV 0.939 0 21 hm5C_associated_SNPs_1553 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:242030140-242030160
64251 chr20 330383 330383 1 + C T SKCM 330383 + 330363 330403 41 CGCTCCTACCTGCACCTCTTCTATGAGGACTGTGCAGGCAC CGCTCCTACCTGCACCTCTTTTATGAGGACTGTGCAGGCAC Direct Loss 1 0.347229890565749 1 0.037634402513504 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330383 chr20:330383 synonymous SNV . 0 21 hm5C_associated_SNPs_1554 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr7 150773192 150773192 1 + C T SKCM 150773192 + 150773172 150773212 41 TCCACAGCTGCCTCCCTGGCCTTCCCCTTCATCCTCATCCT TCCACAGCTGCCTCCCTGGCTTTCCCCTTCATCCTCATCCT Direct Loss 1 0.0738309867902636 1 0.00872054696083069 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773192 chr7:150773192 synonymous SNV . 0 21 hm5C_associated_SNPs_1556 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150773168-150773199
64251 chr10 5963508 5963508 1 + C T SKCM 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT CGGGTGACGGAAGGGGAATTTCCTTCAAGGATACATTTGAT Direct Loss 1 0.105026149444054 1 0.43174797296524 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963508 synonymous SNV . 0 21 hm5C_associated_SNPs_1557 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:5963477-5963518
64251 chr8 38899577 38899577 1 + C T SKCM 38899577 + 38899557 38899597 41 CTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTG CTGATGAAGCCTATAGTGCTTCCTCCTGTGGTAATAAGTTG Direct Loss 1 0.0966517395990056 1 0.115405201911926 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899577 chr8:38899577 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1558 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr6 161470199 161470199 1 + C T SKCM 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATATTATTAATGAAATCTTTACTTTCAAAGTCGACTAT Direct Loss 1 0.0685069079665691 1 0.0709399282932281 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470199 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1559 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:161470180-161470200
64251 chr19 42373237 42373237 1 + C T SKCM 42373237 + 42373217 42373257 41 AAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCT AAGAGTGTGGCCCGCCGGGTTCTCCAAGCCCTGGAGGGGCT Direct Loss 1 0.0573637192979553 1 0.322162747383118 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373237 chr19:42373237 synonymous SNV . 0 21 hm5C_associated_SNPs_1560 0 0 45 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr2 238944540 238944540 1 + C T SKCM 238944540 + 238944520 238944560 41 ATCTTTTGAATTTTGATGATCCACTGAATATTGAAGCTGCA ATCTTTTGAATTTTGATGATTCACTGAATATTGAAGCTGCA Direct Loss 1 0.103340513995222 1 0.0557961463928223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE2F ENSG00000184182;ENSG00000258984 CDS Human other chr2:238944540 chr2:238944540 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1561 0 0 4 BUD13 POSTAR2 ENCODE chr2:238944530-238944586
64251 chr3 184039162 184039162 1 + C T SKCM 184039162 + 184039142 184039182 41 CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCA CCCAGCCTTCGTCGCCTTCTTCGACCCCATCACCATCCCCA Direct Loss 1 0.266278083495675 1 0.621188402175903 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039162 chr3:184039162 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1562 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr9 21859391 21859391 1 + C T SKCM 21859391 + 21859371 21859411 41 ACCATACCTCAGATAGGGTCCACAGAATGGTCAGAAACCCT ACCATACCTCAGATAGGGTCTACAGAATGGTCAGAAACCCT Direct Loss 1 0.272232770199806 1 0.320134401321411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859391 chr9:21859391 synonymous SNV . 0 21 hm5C_associated_SNPs_1566 0 0 4 HNRNPU POSTAR2 GSE34491,GSM850170 chr9:21859380-21859400
64251 chr3 47041164 47041164 1 + C T SKCM 47041164 + 47041144 47041184 41 TGGCTGTGGTACAGCTGTCCCTCCAGGCTGACCTCAGCGTT TGGCTGTGGTACAGCTGTCCTTCCAGGCTGACCTCAGCGTT Direct Loss 1 0.624051238295611 1 0.882061958312988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041164 chr3:47041164 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_1568 0 0 2 EIF3H POSTAR2 ENCODE chr3:47041142-47041190
64251 chr7 154738116 154738116 1 - G A SKCM 154738116 - 154738096 154738136 41 GATGTTCACAATGCAGAGTTCGTTCTGACTGGAGTGCTCAC GATGTTCACAATGCAGAGTTTGTTCTGACTGGAGTGCTCAC Direct Loss 1 0.0573314244915678 1 0.0151525437831879 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAXIP1 ENSG00000157212 CDS Human protein_coding chr7:154738116 chr7:154738116 synonymous SNV . 0 21 hm5C_associated_SNPs_1569 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:154738079-154738119
64251 chr22 39125543 39125543 1 + C T SKCM 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCGACGAAAAAGGGCCTCCTGACGAAACGAGACGAGG Direct Loss 1 0.0280022225619047 1 0.159533441066742 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125543 nonsynonymous SNV 0.658 2 21 hm5C_associated_SNPs_1570 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr3 193361862 193361862 1 + C T SKCM 193361862 + 193361842 193361882 41 TCGTTTTGACCAAAGTAGACCTGGCAGAGAAAAATGTAGCC TCGTTTTGACCAAAGTAGACTTGGCAGAGAAAAATGTAGCC Direct Loss 1 0.387456381599388 1 0.258930206298828 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193361862 chr3:193361862 synonymous SNV . 0 21 hm5C_associated_SNPs_1571 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:193361780-193361865
64251 chr7 157041160 157041160 1 + C T SKCM 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGGACATTCACCACCTCGCTTCCCTAGACCCTGAGGTGTA Direct Loss 1 0.345574386232546 1 0.245069712400436 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041160 synonymous SNV . 0 21 hm5C_associated_SNPs_1572 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr7:157041120-157041160
64251 chr19 36216190 36216190 1 + C T SKCM 36216190 + 36216170 36216210 41 TCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTG TCACCTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCTG Direct Loss 1 0.0469518066070237 1 0.111710965633392 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216190 chr19:36216190 nonsynonymous SNV 0.837 4 21 hm5C_associated_SNPs_1573 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr17 73567066 73567066 1 + C T SKCM 73567066 + 73567046 73567086 41 GCCAAGGCTGAGCGGCCAGGCCTCCAGAACATGGAGCTGGC GCCAAGGCTGAGCGGCCAGGTCTCCAGAACATGGAGCTGGC Direct Loss 1 0.0864619295813921 1 0.502017557621002 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73567066 chr17:73567066 synonymous SNV . 0 21 hm5C_associated_SNPs_1574 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:73567054-73567085
64251 chr5 132400719 132400719 1 + C T SKCM 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TCGTTCAATTGGAGCAGCAGTTAAAAGCCAGGTAAAGTTTC Direct Loss 1 0.481125258369559 1 0.32221382856369 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400719 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1575 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132400683-132400729
64251 chr11 67017891 67017891 1 + C T SKCM 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAAGATCCGGGGATTGTACCTCACTGTCACGCTAC Direct Loss 1 0.117102211525209 1 0.0996314585208893 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017891 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1576 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67017853-67017899
64251 chr3 127340602 127340602 1 + C T SKCM 127340602 + 127340582 127340622 41 ACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT ACCTGAAAAGGAAAATGATCTTGCAGCAGTTCTGAGGCCCT Direct Loss 1 0.619367542205927 1 0.611340582370758 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127340602 chr3:127340602 synonymous SNV . 0 21 hm5C_associated_SNPs_1577 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127340515-127340620
64251 chr16 30081507 30081507 1 + C T SKCM 30081507 + 30081487 30081527 41 GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC GGGCTGCTGCCAGCGAGTCCTTCTTCGTCTCTAACCACGCC Direct Loss 1 0.19957868799001 1 0.0488018095493317 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081507 chr16:30081507 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1578 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr19 54652444 54652444 1 + C T SKCM 54652444 + 54652424 54652464 41 GCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCA GCAGCCAGGCCTTGGGCCCCTCTTCCGGCCCCCACAACCCA Direct Loss 1 0.0260624320670312 1 0.0496993958950043 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652444 chr19:54652444 nonsynonymous SNV 0.069 0 21 hm5C_associated_SNPs_1579 0 0 1 EIF3H POSTAR2 ENCODE chr19:54652382-54652479
64251 chr12 109604784 109604784 1 + C T SKCM 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACACGCTTTGGGGGGGATTGGGTCATCGAGAAGGTACAG Direct Loss 1 0.529968336429835 1 0.535374999046326 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604784 nonsynonymous SNV 0.931 3 21 hm5C_associated_SNPs_1584 0 0 3 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr16 457472 457472 1 + C T SKCM 457472 + 457452 457492 41 GGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC GGCCGGCGCTGCCTCCCTCTTTCTATGGACGTCCGAGCGCC Direct Loss 1 0.791846518488477 1 0.808662176132202 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout DECR2 ENSG00000242612 CDS Human protein_coding chr16:457472 chr16:457472 synonymous SNV . 0 21 hm5C_associated_SNPs_1585 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1486177 chr16:457460-457480
64251 chr4 154216623 154216623 1 + C T SKCM 154216623 + 154216603 154216643 41 AACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCGCGGGA AACGAGCTGGCCGACCAGGATTTCCCCTTGCACCCGCGGGA Direct Loss 1 0.124590986202346 1 0.0431608259677887 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154216623 chr4:154216623 synonymous SNV . 0 21 hm5C_associated_SNPs_1589 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:154216615-154216632
64251 chr15 52356226 52356226 1 + C T SKCM 52356226 + 52356206 52356246 41 AAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGAT AAGAAGTACAAGTTGATCCCTGAAAATATTTGGATGGAGAT Direct Loss 1 0.578491121816563 1 0.340902626514435 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356226 chr15:52356226 stopgain 1.000 1 21 hm5C_associated_SNPs_1591 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr5 139889228 139889228 1 + C G SKCM 139889228 + 139889208 139889248 41 ATTGGTTTAAACAGACGGGTCTTACCCCCTTGATGGAAGCA ATTGGTTTAAACAGACGGGTGTTACCCCCTTGATGGAAGCA Direct Loss 1 0.0127294015520406 1 0.0633706152439117 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889228 chr5:139889228 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_1592 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139889221-139889242
64251 chr15 52356225 52356225 1 + C T SKCM 52356225 + 52356205 52356245 41 GAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGA GAAGAAGTACAAGTTGATCCTCGAAAATATTTGGATGGAGA Direct Loss 1 0.469540341134775 1 0.602875649929047 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356225 chr15:52356225 synonymous SNV . 0 21 hm5C_associated_SNPs_1593 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr17 4797353 4797353 1 + C T SKCM 4797353 + 4797333 4797373 41 AGGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC AGGAGATCACCGGGACCCAGTCCCCATACGGGGGCGGCACC Direct Loss 1 0.084554879270806 1 0.141417235136032 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797353 chr17:4797353 nonsynonymous SNV 0.958 0 21 hm5C_associated_SNPs_1595 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr5 54654434 54654434 1 + C G SKCM 54654434 + 54654414 54654454 41 AATACATTCAGATGTCTGGTCGTGCTGGAAGGAGAGGAATG AATACATTCAGATGTCTGGTGGTGCTGGAAGGAGAGGAATG Direct Loss 1 0.21685676511542 1 0.174804210662842 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54654434 chr5:54654434 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_1596 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr5:54654419-54654471
64251 chr15 44127344 44127344 1 + C A SKCM 44127344 + 44127324 44127364 41 TTTTGCTTCTCTTCAGTTGTCTGAGGTTTGTGTGGAGTCTA TTTTGCTTCTCTTCAGTTGTATGAGGTTTGTGTGGAGTCTA Direct Loss 1 0.721385741403165 1 0.500319004058838 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR76 ENSG00000092470 CDS Human protein_coding chr15:44127344 chr15:44127344 nonsynonymous SNV 0.990 0 21 hm5C_associated_SNPs_1597 0 0 3 DDX24 POSTAR2 ENCODE chr15:44127326-44127349
64251 chr12 53412624 53412624 1 + C T STAD 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGACGATGTGTATAGGGTGCCTCCAATTGACCGTTCCA Direct Loss 1 0.35772572706504 1 0.0308118164539337 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412624 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_1599 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:53412588-53412630
64251 chr7 73636001 73636001 1 + C T STAD 73636001 + 73635981 73636021 41 TGGAGTATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA TGGAGTATTACAACTGGGGGTGGTTCTCGAAGCCCCCAGAA Direct Loss 1 0.200843292021834 1 0.143744260072708 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636001 chr7:73636001 nonsynonymous SNV 0.028 0 21 hm5C_associated_SNPs_1600 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr20 25273229 25273229 1 + C T STAD 25273229 + 25273209 25273249 41 GGCCTGCGGGTGGAGGATGTCGAGGCCTTGGACCGGAAAGG GGCCTGCGGGTGGAGGATGTTGAGGCCTTGGACCGGAAAGG Direct Loss 1 0.800535382411371 1 0.801829814910889 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PYGB ENSG00000100994 CDS Human protein_coding chr20:25273229 chr20:25273229 synonymous SNV . 0 21 hm5C_associated_SNPs_1601 0 0 3 NOL12 POSTAR2 ENCODE chr20:25273183-25273244
64251 chr1 36028847 36028847 1 + C A STAD 36028847 + 36028827 36028867 41 CCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGG CCTGACCGTTGAAGATGGGCACCGGGAGATCCTGATCAAGG Direct Loss 1 0.342004332338454 1 0.169945955276489 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028847 chr1:36028847 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1603 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr14 75265268 75265268 1 + C T STAD 75265268 + 75265248 75265288 41 TGGTGAGGCCTGGAAGCAGTCGGGAGAAAGTGCCAGGTGGT TGGTGAGGCCTGGAAGCAGTTGGGAGAAAGTGCCAGGTGGT Direct Loss 1 0.937987611518392 1 0.883534550666809 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75265268 chr14:75265268 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1604 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:75265194-75265273
64251 chr16 89783151 89783151 1 + C T STAD 89783151 + 89783131 89783171 41 GACCCACCAAGCTTGGCGGCCGTCGACTGGGCCCTCTCCAG GACCCACCAAGCTTGGCGGCTGTCGACTGGGCCCTCTCCAG Direct Loss 1 0.20682655055371 1 0.246579825878143 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS9D1 ENSG00000075399 CDS Human protein_coding chr16:89783151 chr16:89783151 synonymous SNV . 0 21 hm5C_associated_SNPs_1605 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:89783120-89783200
64251 chr22 18209612 18209612 1 + C T STAD 18209612 + 18209592 18209632 41 GAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACA GAGCTTACCTGTGTCACTGTTAGCTAGCCAGAGTTGGCACA Direct Loss 1 0.655006529233933 1 0.113711625337601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18209612 chr22:18209612 nonsynonymous SNV 0.871 4 21 hm5C_associated_SNPs_1606 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr22:18209602-18209623
64251 chr4 54244047 54244047 1 + C T STAD 54244047 + 54244027 54244067 41 CGCCTAGTGTCGGAGCTGAGCGGCGGGACCGGAGGGGATGA CGCCTAGTGTCGGAGCTGAGTGGCGGGACCGGAGGGGATGA Direct Loss 1 0.826991950411906 1 0.500424981117249 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244047 chr4:54244047 synonymous SNV . 0 21 hm5C_associated_SNPs_1607 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:54244039-54244063
64251 chr1 158063221 158063221 1 + C T STAD 158063221 + 158063201 158063241 41 CCTTGGTATTCTTCCTCTACCGGCGCCGCAAAGGCAGTGAG CCTTGGTATTCTTCCTCTACTGGCGCCGCAAAGGCAGTGAG Direct Loss 1 0.652364577703962 1 0.328635990619659 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIRREL ENSG00000183853 CDS Human protein_coding chr1:158063221 chr1:158063221 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_1608 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158063174-158063221
64251 chr11 64802601 64802601 1 + C T STAD 64802601 + 64802581 64802621 41 GCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCC GCCACCCCCTCTGATCCCCATCCCGCCCCCTGATGACCCCC Direct Loss 1 0.175236440575255 1 0.625049948692322 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802601 chr11:64802601 nonsynonymous SNV 0.889 2 21 hm5C_associated_SNPs_1609 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr12 112229169 112229169 1 + C T STAD 112229169 + 112229149 112229189 41 TTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGA TTTGGCCCCACGGCTGGGGCTGCCATTGCCTCCCATGAGGA Direct Loss 1 0.741747578373163 1 0.263487786054611 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229169 chr12:112229169 synonymous SNV . 0 21 hm5C_associated_SNPs_1610 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr9 131830576 131830576 1 + C T STAD 131830576 + 131830556 131830596 41 CCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGAC CCTCGGTGCTCGCCGTCCTGTGGAACCGCTGGCTGTCAGAC Direct Loss 1 0.700585658154305 1 0.771766066551208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830576 chr9:131830576 nonsynonymous SNV 0.975 4 21 hm5C_associated_SNPs_1611 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830553-131830596
64251 chrX 48759692 48759692 1 + C T STAD 48759692 + 48759672 48759712 41 AGAGAGAGCGAGACAGGGAACGGGATCGGGACCGCGGGTAT AGAGAGAGCGAGACAGGGAATGGGATCGGGACCGCGGGTAT Direct Loss 1 0.947353183818526 1 0.870927095413208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759692 chrX:48759692 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_1612 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr11 64128952 64128952 1 + C A STAD 64128952 + 64128932 64128972 41 CCCTCCCAGAAAGAGCGGACCTTCTCCTTCTGTGGCACCAT CCCTCCCAGAAAGAGCGGACATTCTCCTTCTGTGGCACCAT Direct Loss 1 0.0483142559715163 1 0.0506971180438995 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128952 chr11:64128952 synonymous SNV . 0 21 hm5C_associated_SNPs_1616 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:64128951-64128989
64251 chr3 142422814 142422814 1 + C A STAD 142422814 + 142422794 142422834 41 GAAGGGAATTCAACACTTACCCTGGCATTGGTATGGCAGCT GAAGGGAATTCAACACTTACACTGGCATTGGTATGGCAGCT Direct Loss 1 0.328135290781501 1 0.172278821468353 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLS1 ENSG00000120756 CDS Human protein_coding chr3:142422814 chr3:142422814 synonymous SNV . 0 21 hm5C_associated_SNPs_1618 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:142422792-142422821
64251 chr1 180049727 180049727 1 + C G STAD 180049727 + 180049707 180049747 41 ATAGGACTGGAGGACAATGTCACCTGCCTATCAAGTCCCAT ATAGGACTGGAGGACAATGTGACCTGCCTATCAAGTCCCAT Direct Loss 1 0.423933436964576 1 0.107810109853745 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180049727 chr1:180049727 nonsynonymous SNV 0.239 1 21 hm5C_associated_SNPs_1619 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:180049698-180049733
64251 chr7 87530094 87530094 1 + C T STAD 87530094 + 87530074 87530114 41 ATCAGAATCCAAACAGATGGCGATAAGTATGGTGGAACCTC ATCAGAATCCAAACAGATGGTGATAAGTATGGTGGAACCTC Direct Loss 1 0.497738254303623 1 0.136362761259079 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530094 chr7:87530094 synonymous SNV . 0 21 hm5C_associated_SNPs_1621 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:87530081-87530102
64251 chr21 45217944 45217944 1 + C T STAD 45217944 + 45217924 45217964 41 GAGGGTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTC GAGGGTGGTGAGCGTGGAGATGCGCTGTCCCAGAAGAGGTC Direct Loss 1 0.650743015646228 1 0.448181867599487 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217944 chr21:45217944 synonymous SNV . 0 21 hm5C_associated_SNPs_1622 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr21:45217931-45217957
64251 chr14 24707977 24707977 1 + C T STAD 24707977 + 24707957 24707997 41 GAATCCAATCTTCAGTGAGGCGTGCTAGACCTGAGCAGTTC GAATCCAATCTTCAGTGAGGTGTGCTAGACCTGAGCAGTTC Direct Loss 1 0.456021931533931 1 0.140942931175232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPR2 ENSG00000100938;ENSG00000100938 exonic;splicing Human other chr14:24707977 chr14:24707977 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_1623 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:24707954-24707980
64251 chr16 89970558 89970558 1 + C T STAD 89970558 + 89970538 89970578 41 TGCTCGAGTCTTGCAGTGTGCGGCCCGACGCCAGCGTTTCC TGCTCGAGTCTTGCAGTGTGTGGCCCGACGCCAGCGTTTCC Direct Loss 1 0.462541064453771 1 0.295044898986816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89970558 chr16:89970558 nonsynonymous SNV 0.134 4 21 hm5C_associated_SNPs_1624 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89970545-89970572
64251 chr3 33887074 33887074 1 + C T STAD 33887074 + 33887054 33887094 41 CCAGCAAAGACCATGCAGGGCAGTGAGGTAAGAAGGACACT CCAGCAAAGACCATGCAGGGTAGTGAGGTAAGAAGGACACT Direct Loss 1 0.316237741394034 1 0.117112159729004 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33887074 chr3:33887074 synonymous SNV . 0 21 hm5C_associated_SNPs_1625 0 0 2 KHSRP POSTAR2 ENCODE chr3:33887068-33887195
64251 chr16 69352776 69352776 1 + C T STAD 69352776 + 69352756 69352796 41 GGTGGAACGACGTGGCCGGGCTGGAGGGGGCCAAGGAGGCC GGTGGAACGACGTGGCCGGGTTGGAGGGGGCCAAGGAGGCC Direct Loss 1 0.941790317150454 1 0.332048386335373 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69352776 chr16:69352776 synonymous SNV . 0 21 hm5C_associated_SNPs_1627 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr16:69352768-69352781
64251 chr20 42328453 42328453 1 + C T STAD 42328453 + 42328433 42328473 41 ACCATAAAGGAGGAGGAAAACAGTGAGGAGGAACTTGCAGC ACCATAAAGGAGGAGGAAAATAGTGAGGAGGAACTTGCAGC Direct Loss 1 0.603417768141215 1 0.473047822713852 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42328453 chr20:42328453 synonymous SNV . 0 21 hm5C_associated_SNPs_1628 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:42328406-42328522
64251 chr5 71491945 71491945 1 + C T STAD 71491945 + 71491925 71491965 41 GTCGAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGA GTCGAGAAGCAGGGAGTAGATGACATTGAAAAATTTGAAGA Direct Loss 1 0.885274203943343 1 0.486565053462982 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491945 chr5:71491945 synonymous SNV . 0 21 hm5C_associated_SNPs_1629 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71491940-71491964
64251 chr19 19605126 19605126 1 + C T STAD 19605126 + 19605106 19605146 41 ACAGGTTCTGTTGGGAGCACCGTGACCACCCCTCCCCCGCT ACAGGTTCTGTTGGGAGCACTGTGACCACCCCTCCCCCGCT Direct Loss 1 0.623446891787219 1 0.798513174057007 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19605126 chr19:19605126 synonymous SNV . 0 21 hm5C_associated_SNPs_1632 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:19605126-19605127
64251 chr12 121858092 121858092 1 + C T STAD 121858092 + 121858072 121858112 41 ACAGAAGATGATGATGACGACGATGATGAGGATGATGATGA ACAGAAGATGATGATGACGATGATGATGAGGATGATGATGA Direct Loss 1 0.351173921902553 1 0.157333254814148 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNF34 ENSG00000170633 CDS Human protein_coding chr12:121858092 chr12:121858092 synonymous SNV . 0 21 hm5C_associated_SNPs_1633 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121858069-121858114
64251 chr2 132257787 132257787 1 + C T STAD 132257787 + 132257767 132257807 41 ATTGTTTCAGGAGCTGCACACCATCTTCCCATGGCTGGTAG ATTGTTTCAGGAGCTGCACATCATCTTCCCATGGCTGGTAG Direct Loss 1 0.058719632415116 1 0.0606241524219513 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132257787 chr2:132257787 . . 0 21 hm5C_associated_SNPs_1635 0 0 1 XRCC6 POSTAR2 ENCODE chr2:132257776-132257820
64251 chr7 930607 930607 1 + C T STAD 930607 + 930587 930627 41 GTATCATTTTCTGCACTCAGCGGACGGGGAGGGCTGTGCCA GTATCATTTTCTGCACTCAGTGGACGGGGAGGGCTGTGCCA Direct Loss 1 0.460078747234151 1 0.770468354225159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GET4 ENSG00000239857 CDS Human protein_coding chr7:930607 chr7:930607 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_1636 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:930572-930610
64251 chr12 132329865 132329865 1 + C T STAD 132329865 + 132329845 132329885 41 AGTACTTCTGGCGGCTGACGCGGGACCGGCACCTGGTGTCC AGTACTTCTGGCGGCTGACGTGGGACCGGCACCTGGTGTCC Direct Loss 1 0.938585099950395 1 0.904023766517639 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132329865 chr12:132329865 nonsynonymous SNV 0.951 4 21 hm5C_associated_SNPs_1637 0 0 2 DDX55 POSTAR2 ENCODE chr12:132329841-132329877
64251 chr1 151020376 151020376 1 + C T STAD 151020376 + 151020356 151020396 41 CCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAG CCTGCTGCTGAATCTGGGTCTCCGGGCGGCGGGGGCCCAAG Direct Loss 1 0.770618022261153 1 0.920724868774414 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020376 chr1:151020376 nonsynonymous SNV 0.667 1 21 hm5C_associated_SNPs_1638 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 16261125 16261125 1 + C T STAD 16261125 + 16261105 16261145 41 GCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCAGGGG GCCTGTGATCGACGATCGTCTGGCAGACGCGGGCTCAGGGG Direct Loss 1 0.832365732911007 1 0.78812175989151 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261125 chr1:16261125 nonsynonymous SNV 0.070 1 21 hm5C_associated_SNPs_1641 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:16261060-16261160
64251 chrX 70517705 70517705 1 + C T STAD 70517705 + 70517685 70517725 41 GGCAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGG GGCAGGAGGAAGAGCGCAGGTGCCGTGAAGAAGAGATGCGG Direct Loss 1 0.833418513557723 1 0.382883697748184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517705 chrX:70517705 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1642 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70517674-70517712
64251 chr10 115489196 115489196 1 + C T STAD 115489196 + 115489176 115489216 41 CAGGGTGAATGACAGAGTTGCCAGGCACTTTGAGTCTCAGT CAGGGTGAATGACAGAGTTGTCAGGCACTTTGAGTCTCAGT Direct Loss 1 0.311000864396027 1 0.115251421928406 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115489196 chr10:115489196 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1643 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr10:115489180-115489204
64251 chr1 114483597 114483597 1 + C T STAD 114483597 + 114483577 114483617 41 AAGTCTTGGAGTTCCTAGGCCGGGGGACATTTGGACAGGTG AAGTCTTGGAGTTCCTAGGCTGGGGGACATTTGGACAGGTG Direct Loss 1 0.71589688682759 1 0.719051659107208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483597 chr1:114483597 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1644 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483580-114483600
64251 chr19 10404989 10404989 1 + C T STAD 10404989 + 10404969 10405009 41 CAAAACAGTCGTCGTGAGCGCGGAGTGTGAGCGAGGCCCAG CAAAACAGTCGTCGTGAGCGTGGAGTGTGAGCGAGGCCCAG Direct Loss 1 0.537369558668724 1 0.80186653137207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10404989 chr19:10404989 nonsynonymous SNV 0.988 0 21 hm5C_associated_SNPs_1645 0 0 1 FXR2 POSTAR2 ENCODE chr19:10404980-10404990
64251 chr15 99491899 99491899 1 + C T STAD 99491899 + 99491879 99491919 41 CTTCGCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCAGA CTTCGCTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCAGA Direct Loss 1 0.181555057992109 1 0.274376630783081 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99491899 chr15:99491899 synonymous SNV . 0 21 hm5C_associated_SNPs_1646 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99491880-99491900
64251 chr8 143784759 143784759 1 + C T STAD 143784759 + 143784739 143784779 41 GCCATCCTCCTGCTGCTGGCCTCCATTGCAGCCGGCCTCAG GCCATCCTCCTGCTGCTGGCTTCCATTGCAGCCGGCCTCAG Direct Loss 1 0.880319192765041 1 0.798415064811707 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143784759 chr8:143784759 synonymous SNV . 0 21 hm5C_associated_SNPs_1648 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:143784736-143784760
64251 chr1 228333243 228333243 1 + C T STAD 228333243 + 228333223 228333263 41 CCCAGGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAA CCCAGGCCTGTGGTGCTGAGTGGGCCTTCGGGAGCTGGGAA Direct Loss 1 0.726259156224914 1 0.908647775650024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333243 chr1:228333243 nonsynonymous SNV 0.320 0 21 hm5C_associated_SNPs_1649 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:228333200-228333300
64251 chr17 41570095 41570095 1 + C T STAD 41570095 + 41570075 41570115 41 GTCGAAGCCGAGATCGAAACCGAGATCGAGACAGAGATAGG GTCGAAGCCGAGATCGAAACTGAGATCGAGACAGAGATAGG Direct Loss 1 0.814820893875038 1 0.723063349723816 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570095 chr17:41570095 stopgain 0.634 1 21 hm5C_associated_SNPs_1650 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570077-41570134
64251 chr5 177633848 177633848 1 + C A STAD 177633848 + 177633828 177633868 41 TGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGG TGGGGGTCTGAATCCTGAAGACACTGAGGAAAAGATCAGGG Direct Loss 1 0.135461716119628 1 0.175959467887878 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633848 chr5:177633848 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1651 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177633802-177633857
64251 chr17 45748109 45748109 1 + C T STAD 45748109 + 45748089 45748129 41 GCTGCTTATGAAGCTGCAGACGTTGCTGATGATCAGGAAGA GCTGCTTATGAAGCTGCAGATGTTGCTGATGATCAGGAAGA Direct Loss 1 0.174407254776066 1 0.100580871105194 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45748109 chr17:45748109 synonymous SNV . 0 21 hm5C_associated_SNPs_1652 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:45748060-45748160
64251 chr2 46607459 46607459 1 + C T STAD 46607459 + 46607439 46607479 41 GCCCCATCTGCCCCGAGGAGCGGCTCTTGGCGGAGAACCCA GCCCCATCTGCCCCGAGGAGTGGCTCTTGGCGGAGAACCCA Direct Loss 1 0.431863886702954 1 0.266921013593674 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607459 chr2:46607459 nonsynonymous SNV 0.338 2 21 hm5C_associated_SNPs_1653 0 0 1 NOL12 POSTAR2 ENCODE chr2:46607401-46607469
64251 chr12 31244687 31244687 1 + C T STAD 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTGCATGTGGCCACTCGGCAGGCCGCGG Direct Loss 1 0.570831870713936 1 0.258034080266953 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244687 nonsynonymous SNV 0.253 0 21 hm5C_associated_SNPs_1654 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr1 109642959 109642959 1 + C T STAD 109642959 + 109642939 109642979 41 GTGTTAGGCGAGTGCGTGCGCCCACCCCTGCGCCCCTCCTC GTGTTAGGCGAGTGCGTGCGTCCACCCCTGCGCCCCTCCTC Direct Loss 1 0.2335704140095 1 0.793095350265503 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642959 chr1:109642959 . . 0 21 hm5C_associated_SNPs_1655 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chrX 129149555 129149555 1 + C T STAD 129149555 + 129149535 129149575 41 GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG GACTGGGACCCTGGCACTGTTTGTTCAGCCTAGCGGTGGGG Direct Loss 1 0.173765586639685 1 0.0374945402145386 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149555 chrX:129149555 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_1657 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chrX:129149525-129149557
64251 chr11 831623 831623 1 + C T STAD 831623 + 831603 831643 41 GGAAGGCTCTGACAACAGCCCGCCTGCCTGGGCCCACCTGC GGAAGGCTCTGACAACAGCCTGCCTGCCTGGGCCCACCTGC Direct Loss 1 0.568135962669783 1 0.0524554252624512 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831623 chr11:831623 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_1658 0 0 1 LSM11 POSTAR2 ENCODE chr11:831533-831676
64251 chr5 139947624 139947624 1 + C T STAD 139947624 + 139947604 139947644 41 TCCTGCTCGCTGGTGGTCAACGCCGTGCTCTCAGCAGTCCT TCCTGCTCGCTGGTGGTCAATGCCGTGCTCTCAGCAGTCCT Direct Loss 1 0.785934652541075 1 0.134802162647247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947624 chr5:139947624 synonymous SNV . 0 21 hm5C_associated_SNPs_1659 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:139947585-139947645
64251 chr19 36216189 36216189 1 + C T STAD 36216189 + 36216169 36216209 41 CTCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCT CTCACCTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCT Direct Loss 1 0.0146964638348102 1 0.0611581206321716 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216189 chr19:36216189 synonymous SNV . 0 21 hm5C_associated_SNPs_1660 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr15 45353327 45353327 1 + C T STAD 45353327 + 45353307 45353347 41 ATGAATTCTGCAAGATGGGCCGATACAATCTGTCACCTTCC ATGAATTCTGCAAGATGGGCTGATACAATCTGTCACCTTCC Direct Loss 1 0.225471880929368 1 0.19602957367897 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SORD ENSG00000140263 CDS Human protein_coding chr15:45353327 chr15:45353327 stopgain 0.933 1 21 hm5C_associated_SNPs_1661 0 0 2 METAP2 POSTAR2 ENCODE chr15:45353327-45353396
64251 chr11 14865490 14865490 1 + C T STAD 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TCCTGCATTAGAATTGATGGTTCTATACGTGGCAGCTGCCA Direct Loss 1 0.434273154622335 1 0.39725661277771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865490 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1662 0 0 2 GRWD1 POSTAR2 ENCODE chr11:14865417-14865522
64251 chr6 4937916 4937916 1 + C T STAD 4937916 + 4937896 4937936 41 TTGACTTTATTTATTTTATACGACGTCTGACAGATGACAGG TTGACTTTATTTATTTTATATGACGTCTGACAGATGACAGG Direct Loss 1 0.392939855523714 1 0.0844229757785797 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4937916 chr6:4937916 stopgain 0.989 1 21 hm5C_associated_SNPs_1665 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:4937885-4937916
64251 chr4 88036091 88036091 1 + C T STAD 88036091 + 88036071 88036111 41 GCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC GCGAAGGACAATGTGGAGGATAGGACCCCTGAGCACTTTGC Direct Loss 1 0.714820195097967 1 0.393416464328766 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036091 chr4:88036091 synonymous SNV . 0 21 hm5C_associated_SNPs_1666 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:88036074-88036104
64251 chr5 109155379 109155379 1 + C T STAD 109155379 + 109155359 109155399 41 ATCTTTTAAAGATCTCTTTTCGAGCACATATACCGCCATTG ATCTTTTAAAGATCTCTTTTTGAGCACATATACCGCCATTG Direct Loss 1 0.201539001651533 1 0.395804792642593 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109155379 chr5:109155379 stopgain 0.965 0 21 hm5C_associated_SNPs_1670 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221663 chr5:109155360-109155380
64251 chrX 64936689 64936689 1 + C T STAD 64936689 + 64936669 64936709 41 TCTCATCCTAGATCAGTGTGCGTGTGACCACCATGGATGCA TCTCATCCTAGATCAGTGTGTGTGTGACCACCATGGATGCA Direct Loss 1 0.274268191885304 1 0.0358991324901581 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSN ENSG00000147065 CDS Human protein_coding chrX:64936689 chrX:64936689 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1672 0 0 7 RBM47 POSTAR2 GSE58380,GSM1409656 chrX:64936680-64936700
64251 chr10 75871668 75871668 1 + C T STAD 75871668 + 75871648 75871688 41 CTTCCCGCCATCGACAAAGCCGGGCATCCCAGCCGCTGAGG CTTCCCGCCATCGACAAAGCTGGGCATCCCAGCCGCTGAGG Direct Loss 1 0.499272997830423 1 0.771262645721436 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871668 chr10:75871668 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1673 0 0 3 QKI POSTAR2 ENCODE chr10:75871616-75871699
64251 chr14 93119189 93119189 1 + C T STAD 93119189 + 93119169 93119209 41 ACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTG ACGCTTTCCTCTCCAACAACTGCAAGCTGTACAAGAAGGTG Direct Loss 1 0.401123172801851 1 0.207690328359604 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIN3 ENSG00000100599 CDS Human protein_coding chr14:93119189 chr14:93119189 nonsynonymous SNV 0.697 4 21 hm5C_associated_SNPs_1674 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:93119171-93119190
64251 chr3 49212180 49212180 1 + C T STAD 49212180 + 49212160 49212200 41 CAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGTG CAATTCCATTGACAGGGGGCTGCCAGGGCAAGCTCCCGGTG Direct Loss 1 0.660544629428357 1 0.145849704742432 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212180 chr3:49212180 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1675 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr16 28884771 28884771 1 + C T STAD 28884771 + 28884751 28884791 41 TTACCATTCCTATCCAGAACCGACCACCTCCCATGACCCAC TTACCATTCCTATCCAGAACTGACCACCTCCCATGACCCAC Direct Loss 1 0.260479231618074 1 0.151291579008102 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884771 chr16:28884771 nonsynonymous SNV 0.982 0 21 hm5C_associated_SNPs_1676 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr16:28884741-28884773
64251 chr3 52011901 52011901 1 + C A STAD 52011901 + 52011881 52011921 41 CTCCAGACTGTGGTACAGACCTCCATGAGCCGGTCCCAGGT CTCCAGACTGTGGTACAGACATCCATGAGCCGGTCCCAGGT Direct Loss 1 0.782776219391217 1 0.968424022197723 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ABHD14A ENSG00000114786;ENSG00000248487 CDS Human other chr3:52011901 chr3:52011901 synonymous SNV . 0 21 hm5C_associated_SNPs_1679 0 0 3 DDX3X POSTAR2 ENCODE chr3:52011889-52011943
64251 chr10 17277192 17277192 1 + C T STAD 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCCCTGGAACGCCAGATGTGTGAAATGGAAGAGAACTTT Direct Loss 1 0.617312827736268 1 0.35546487569809 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277192 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_1680 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr11 67018208 67018208 1 + C T STAD 67018208 + 67018188 67018228 41 AGGTCTGGATGTCTGTCTTCCGCTACCTCAGCCGCAGAGAA AGGTCTGGATGTCTGTCTTCTGCTACCTCAGCCGCAGAGAA Direct Loss 1 0.49550265110591 1 0.196584820747375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018208 chr11:67018208 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1682 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr11:67018169-67018209
64251 chr17 7160303 7160303 1 + C A STAD 7160303 + 7160283 7160323 41 ACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCT ACCCTGGGCGGTACCATGGGACAGGCCTCGGCCCACATCCT Direct Loss 1 0.456592206629622 1 0.319315433502197 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160303 chr17:7160303 synonymous SNV . 0 21 hm5C_associated_SNPs_1683 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr11 65978630 65978630 1 + C T STAD 65978630 + 65978610 65978650 41 TCATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC TCATTTCCTTAAGCGAGATGTCAACAAGCTGCAGATCATGC Direct Loss 1 0.0115105260789514 1 0.0981107652187347 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978630 chr11:65978630 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1685 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr17 15929902 15929902 1 + C T STAD 15929902 + 15929882 15929922 41 CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCCTATATT CTACCCTGGATGCACAGGGCTGCTTTGATGAGGCCTATATT Direct Loss 1 0.172031643662735 1 0.0236749947071075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929902 chr17:15929902 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_1686 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr17:15929878-15929905
64251 chr22 46681140 46681140 1 + C T STAD 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGTGAATATGAGGCCGCGCTGAC Direct Loss 1 0.114177016556587 1 0.251281917095184 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681140 synonymous SNV . 0 21 hm5C_associated_SNPs_1688 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr11 598413 598413 1 + C T STAD 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG GTCTTCCCTGCTGGATGAAGTCATCGAGGCTGTGGCGACTG Direct Loss 1 0.133087737610856 1 0.119356125593185 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598413 nonsynonymous SNV 0.042 0 21 hm5C_associated_SNPs_1691 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:598400-598420
64251 chr18 19209067 19209067 1 + C T STAD 19209067 + 19209047 19209087 41 GAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGGT GAAGAGGAAGAGGACGTGGCTGTGGCAGAGGAAGAGGGGGT Direct Loss 1 0.720211247619036 1 0.356079757213593 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209067 chr18:19209067 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_1692 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr12 53428436 53428436 1 + C T STAD 53428436 + 53428416 53428456 41 AAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAG AAGAAACTCAGGAACGGGAATGGTCGAGGACAGGAAGTGAG Direct Loss 1 0.247483067756465 1 0.465321868658066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53428436 chr12:53428436 nonsynonymous SNV 0.993 3 21 hm5C_associated_SNPs_1693 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:53428420-53428440
64251 chr6 116747964 116747964 1 + C T STAD 116747964 + 116747944 116747984 41 CAACTGTATGGCTTTGCTCACGGGAAGCCTAGTCCTGATGA CAACTGTATGGCTTTGCTCATGGGAAGCCTAGTCCTGATGA Direct Loss 1 0.889114339847173 1 0.629616320133209 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DSE ENSG00000111817 CDS Human protein_coding chr6:116747964 chr6:116747964 nonsynonymous SNV 0.822 3 21 hm5C_associated_SNPs_1694 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:116747938-116747975
64251 chr8 9620699 9620699 1 + C T STAD 9620699 + 9620679 9620719 41 TCACTGTGTTAATCAGGGAACGATTTTGCTGGATCTTGCTC TCACTGTGTTAATCAGGGAATGATTTTGCTGGATCTTGCTC Direct Loss 1 0.0905660245491174 1 0.0645692348480225 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9620699 chr8:9620699 nonsynonymous SNV 0.993 4 21 hm5C_associated_SNPs_1695 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:9620668-9620700
64251 chr19 18966037 18966037 1 + C T STAD 18966037 + 18966017 18966057 41 ACCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGGG ACCATCGTCTACCACCTGGCTCGGCAAGGCAACGGGTAGGG Direct Loss 1 0.21275765012132 1 0.16264072060585 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966037 chr19:18966037 synonymous SNV . 0 21 hm5C_associated_SNPs_1696 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:18966014-18966039
64251 chr8 9564436 9564436 1 + C T STAD 9564436 + 9564416 9564456 41 TAGCCATGGCGCTGATCCTACATTAGTCAACTGCCATGGCA TAGCCATGGCGCTGATCCTATATTAGTCAACTGCCATGGCA Direct Loss 1 0.328286111801574 1 0.0324158370494843 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9564436 chr8:9564436 nonsynonymous SNV 0.203 4 21 hm5C_associated_SNPs_1697 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr8:9564418-9564441
64251 chr19 579629 579629 1 + C T STAD 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG CGTGGTGCTGAAGGAGGACGTGCTGCCCGGCCAGAAAACGG Direct Loss 1 0.460149597814337 1 0.178399533033371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579629 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_1698 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr17 37359334 37359334 1 + C T STAD 37359334 + 37359314 37359354 41 GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGAT GCCGGCTGCTCAGAAGATACTGTGAATCTAAGAAGATCGAT Direct Loss 1 0.766490297908492 1 0.327720820903778 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359334 chr17:37359334 nonsynonymous SNV 0.308 1 21 hm5C_associated_SNPs_1699 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr1 214794185 214794185 1 + C A STAD 214794185 + 214794165 214794205 41 TGGGGAACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAA TGGGGAACAAGAGGTGACTCAAAGTCGATCAACTTTGCAAA Direct Loss 1 0.315371984773962 1 0.25926011800766 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794185 chr1:214794185 nonsynonymous SNV 0.009 3 21 hm5C_associated_SNPs_1700 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr17 4701676 4701676 1 + C T STAD 4701676 + 4701656 4701696 41 GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT GGCAAGTACTTTTGGGAGACTAGATACCCAAATTCGCCGTT Direct Loss 1 0.726397116362813 1 0.709566056728363 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701676 chr17:4701676 stopgain 1.000 1 21 hm5C_associated_SNPs_1701 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4701628-4701787
64251 chr5 167719173 167719173 1 + C T TGCT 167719173 + 167719153 167719193 41 GGAAGATGCCCCGGCCGGAGCTGCCCCTGCCGGAGGGCTGG GGAAGATGCCCCGGCCGGAGTTGCCCCTGCCGGAGGGCTGG Direct Loss 1 0.413894247261621 1 0.0670458674430847 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WWC1 ENSG00000113645 CDS Human protein_coding chr5:167719173 chr5:167719173 synonymous SNV . 0 21 hm5C_associated_SNPs_1702 0 0 1 DDX3X POSTAR2 ENCODE chr5:167719156-167719204
64251 chr8 145583775 145583775 1 + C A TGCT 145583775 + 145583755 145583795 41 TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTC TGCCCTTCTGGTCGCTTCAGATGCTGCCTTCCAGGGTCTTC Direct Loss 1 0.348647974951061 1 0.0546564757823944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583775 chr8:145583775 nonsynonymous SNV 0.026 4 21 hm5C_associated_SNPs_1704 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145583774-145583800
64251 chr1 161326622 161326622 1 + C A THCA 161326622 + 161326602 161326642 41 ATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTC ATCATACCTGGAATGGGATCAGACACTTGGTAAGTTAATTC Direct Loss 1 0.56625550107587 1 0.324494451284409 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHC ENSG00000143252 CDS Human protein_coding chr1:161326622 chr1:161326622 synonymous SNV . 0 21 hm5C_associated_SNPs_1705 0 0 4 PUM2 POSTAR2 ENCODE chr1:161326571-161326632
64251 chr16 81078069 81078069 1 + C G THCA 81078069 + 81078049 81078089 41 CTCAAACTGAAGAGAGTGAACTTAGCACCATGACCACCGAG CTCAAACTGAAGAGAGTGAAGTTAGCACCATGACCACCGAG Direct Loss 1 0.366814850848873 1 0.465894401073456 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078069 chr16:81078069 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1706 0 0 4 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr16:81078040-81078080
64251 chrX 84502590 84502590 1 + C T THCA 84502590 + 84502570 84502610 41 TTGCTAAGTATGGATTCAGGCGGTGGAAGTCTTGGATTGCA TTGCTAAGTATGGATTCAGGTGGTGGAAGTCTTGGATTGCA Direct Loss 1 0.640352287377389 1 0.410169094800949 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84502590 chrX:84502590 synonymous SNV . 0 21 hm5C_associated_SNPs_1707 0 0 32 U2AF2 POSTAR2 GSE83923,CSM2221661 chrX:84502540-84502600
64251 chr5 134130604 134130604 1 + C A THCA 134130604 + 134130584 134130624 41 TATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGG TATGTTTTCAGCTACTTTCCACAGAGCTATGGAGGCTTTGG Direct Loss 1 0.657057037290551 1 0.262951016426086 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130604 chr5:134130604 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1708 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr5:134130578-134130607
64251 chr7 98501140 98501140 1 + C A THCA 98501140 + 98501120 98501160 41 TCACCACAGAGCTGAGAAACCGTACGTCCAGCCTGTCTTGT TCACCACAGAGCTGAGAAACAGTACGTCCAGCCTGTCTTGT Direct Loss 1 0.107928092345648 1 0.236327350139618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98501140 chr7:98501140 nonsynonymous SNV 0.964 1 21 hm5C_associated_SNPs_1709 0 0 1 PRPF8 POSTAR2 ENCODE chr7:98501137-98501183
64251 chr6 32135285 32135285 1 + C T THCA 32135285 + 32135265 32135305 41 TCTCTTCCTTTCTAGTGGGCCGGTCAGGCTGGGGCCTGGGT TCTCTTCCTTTCTAGTGGGCTGGTCAGGCTGGGGCCTGGGT Direct Loss 1 0.0693750440678022 1 0.142582684755325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32135285 chr6:32135285 synonymous SNV . 0 21 hm5C_associated_SNPs_1711 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:32135262-32135302
64251 chr13 27216438 27216438 1 + C A THCA 27216438 + 27216418 27216458 41 TGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCT TGAAGAGGAACATTGAGCCCAGGCACTTGTGCCGGGGAGCT Direct Loss 1 0.576205055867422 1 0.422069847583771 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216438 chr13:27216438 synonymous SNV . 0 21 hm5C_associated_SNPs_1712 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr11 64055914 64055914 1 + C T THYM 64055914 + 64055894 64055934 41 CCCTGCTGGTGGGCTTCTTCCGGGTGCACCGGCCCCCACAG CCCTGCTGGTGGGCTTCTTCTGGGTGCACCGGCCCCCACAG Direct Loss 1 0.938729743926753 1 0.984865069389343 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR137 ENSG00000173264 CDS Human protein_coding chr11:64055914 chr11:64055914 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_1713 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:64055898-64055930
64251 chr15 93528742 93528742 1 + C T THYM 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGATAGTGACTCTGACACTGAGTC Direct Loss 1 0.247253508351605 1 0.0576527118682861 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528742 synonymous SNV . 0 21 hm5C_associated_SNPs_1715 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:93528734-93528759
64251 chr7 99047906 99047906 1 + C T THYM 99047906 + 99047886 99047926 41 AGTTTCCCTGCAGGGGAGTGCAGCAACAAGGAATGTCCCTT AGTTTCCCTGCAGGGGAGTGTAGCAACAAGGAATGTCCCTT Direct Loss 1 0.785484376361464 1 0.164965718984604 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99047906 chr7:99047906 synonymous SNV . 0 21 hm5C_associated_SNPs_1716 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr7:99047900-99047920
64251 chr3 40353054 40353054 1 + C A UCEC 40353054 + 40353034 40353074 41 GAAAAAACATCTGCCAGTTTCTCTTGGAGGTGAGTGATTGG GAAAAAACATCTGCCAGTTTATCTTGGAGGTGAGTGATTGG Direct Loss 1 0.390481301029526 1 0.08941450715065 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF1B ENSG00000114784 CDS Human protein_coding chr3:40353054 chr3:40353054 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1717 0 0 6 GPKOW POSTAR2 ENCODE chr3:40353031-40353080
64251 chr12 6639957 6639957 1 + C T UCEC 6639957 + 6639937 6639977 41 CCAAGCAGGTAGCCAGAGAGCGCCATCAGCCAAGAAACCAT CCAAGCAGGTAGCCAGAGAGTGCCATCAGCCAAGAAACCAT Direct Loss 1 0.776417712838366 1 0.237690269947052 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6639957 chr12:6639957 nonsynonymous SNV 0.186 1 21 hm5C_associated_SNPs_1718 0 0 1 DDX24 POSTAR2 ENCODE chr12:6639941-6639966
64251 chr2 177015070 177015070 1 + C T UCEC 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAGAACTGAATTTGTGTGGTATCCGTA Direct Loss 1 0.422167459662374 1 0.0917367339134216 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015070 . . 0 21 hm5C_associated_SNPs_1721 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr1 120286511 120286511 1 + C T UCEC 120286511 + 120286491 120286531 41 AGTTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTG AGTTTCTTCTATTTCCAGGCTTCCTGGCAGAGGCAGGCGTG Direct Loss 1 0.389821137300178 1 0.25118625164032 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286511 chr1:120286511 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1722 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:120286500-120286520
64251 chr20 43052674 43052674 1 + C T UCEC 43052674 + 43052654 43052694 41 GTAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCG GTAGATGCCAAGGGGCTGAGTGATCCAGGGAAGATCAAGCG Direct Loss 1 0.158900650761587 1 0.229853510856628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052674 chr20:43052674 synonymous SNV . 0 21 hm5C_associated_SNPs_1724 0 0 1 U2AF2 POSTAR2 ENCODE chr20:43052596-43052715
64251 chr12 104378675 104378675 1 + C T UCEC 104378675 + 104378655 104378695 41 CGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC CGTTCAAGAGGTGCAATATATATTTGACCTACAGCTTGCCC Direct Loss 1 0.233253737591919 1 0.0565225481987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TDG ENSG00000139372 CDS Human protein_coding chr12:104378675 chr12:104378675 nonsynonymous SNV 0.985 3 21 hm5C_associated_SNPs_1725 0 0 3 LIN28B POSTAR2 ENCODE chr12:104378607-104378707
64251 chr1 154317162 154317162 1 + C T UCEC 154317162 + 154317142 154317182 41 TCATCCCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA TCATCCCGCTCCGTAGGCAATGGCTTCACCTATCAGGACAA Direct Loss 1 0.350138741015653 1 0.131527841091156 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317162 chr1:154317162 synonymous SNV . 0 21 hm5C_associated_SNPs_1726 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:154317154-154317180
64251 chr10 71146158 71146158 1 + C T UCEC 71146158 + 71146138 71146178 41 AGTCACCTTACTAAGGGATGCGATAAAAAGGAGAGAGGTAA AGTCACCTTACTAAGGGATGTGATAAAAAGGAGAGAGGTAA Direct Loss 1 0.184386496038155 1 0.242765486240387 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71146158 chr10:71146158 nonsynonymous SNV 0.509 5 21 hm5C_associated_SNPs_1727 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:71146140-71146160
64251 chr11 108205739 108205739 1 + C A UCEC 108205739 + 108205719 108205759 41 AAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTCGCT AAATCTGGTGACTATACAGTAATTTAAAGCAGAATTTCGCT Direct Loss 1 0.024891188061693 1 0.0553851127624512 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108205739 chr11:108205739 stopgain 0.987 1 21 hm5C_associated_SNPs_1728 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:108205733-108205754
64251 chr1 150280549 150280549 1 + C T UCEC 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAGCCATGCCGCTGGCGACAGAGGGAAAGCTAT Direct Loss 1 0.697144229203619 1 0.715738356113434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280549 nonsynonymous SNV 0.618 1 21 hm5C_associated_SNPs_1729 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150280491-150280593
64251 chr2 102441795 102441795 1 + C T UCEC 102441795 + 102441775 102441815 41 CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGGTCCATTAC CTATAGCTTGTTATGGAGTTTTGTGGGGCTGGGTCCATTAC Direct Loss 1 0.378190288479314 1 0.167579263448715 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102441795 chr2:102441795 synonymous SNV . 0 21 hm5C_associated_SNPs_1730 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr2:102441780-102441800
64251 chrX 7171312 7171312 1 + C A UCEC 7171312 + 7171292 7171332 41 GCAGCATCAAGGCCGAACATCATCCTGGTGATGGCTGACGA GCAGCATCAAGGCCGAACATAATCCTGGTGATGGCTGACGA Direct Loss 1 0.287793832196826 1 0.0630767643451691 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STS ENSG00000101846 CDS Human protein_coding chrX:7171312 chrX:7171312 synonymous SNV . 0 21 hm5C_associated_SNPs_1731 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:7171300-7171320
64251 chr3 101311550 101311550 1 + C T UCEC 101311550 + 101311530 101311570 41 ATAACCAGAAGCTGTGGGAGCGAAATATAAAATCTCATCTT ATAACCAGAAGCTGTGGGAGTGAAATATAAAATCTCATCTT Direct Loss 1 0.756944228620462 1 0.500365436077118 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNP ENSG00000081154 CDS Human protein_coding chr3:101311550 chr3:101311550 stopgain 1.000 1 21 hm5C_associated_SNPs_1732 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101311540-101311571
64251 chr19 48259803 48259803 1 + C T UCEC 48259803 + 48259783 48259823 41 AGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTC AGCCCGAGGGCAACATCCTTTGAGACCGGTTCAAGAGCTTC Direct Loss 1 0.736412543198483 1 0.739936769008636 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259803 chr19:48259803 stopgain 0.513 0 21 hm5C_associated_SNPs_1734 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:48259794-48259830
64251 chr6 111288931 111288931 1 + C A UCEC 111288931 + 111288911 111288951 41 AAATAGAAGATTCTGGTCCTCTTATTGATATACCTTCTGAG AAATAGAAGATTCTGGTCCTATTATTGATATACCTTCTGAG Direct Loss 1 0.202530677319554 1 0.0831039249897003 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288931 chr6:111288931 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_1736 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:111288920-111288940
64251 chr20 2635125 2635125 1 + C A UCEC 2635125 + 2635105 2635145 41 CGTCCAAAAAGAAGAAAGTACTCTTGGGAGTTGGGGATCCC CGTCCAAAAAGAAGAAAGTAATCTTGGGAGTTGGGGATCCC Direct Loss 1 0.304137954324122 1 0.240497350692749 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635125 chr20:2635125 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1738 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr12 95897859 95897859 1 + C T UCEC 95897859 + 95897839 95897879 41 AGTGTGCTGGAATTGATGTTCGTCTGTGTGATGTTGGTGAG AGTGTGCTGGAATTGATGTTTGTCTGTGTGATGTTGGTGAG Direct Loss 1 0.479726148202811 1 0.405022114515305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95897859 chr12:95897859 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_1739 0 0 31 CELF2 POSTAR2 GSE71264,GSM1831620 chr12:95897840-95897860
64251 chr19 39870630 39870630 1 + C T UCEC 39870630 + 39870610 39870650 41 TCACGGAGACGCAGAAGAAACGGCTGCTATCCTGGAAACAG TCACGGAGACGCAGAAGAAATGGCTGCTATCCTGGAAACAG Direct Loss 1 0.648282537963325 1 0.300581753253937 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39870630 chr19:39870630 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1740 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39870626-39870654
64251 chr10 43289408 43289408 1 + C T UCEC 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA CGCTGTTTTCTGATTCCAAGTCACTTGGGTCAGAGGATATA Direct Loss 1 0.119563112464624 1 0.037396639585495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289408 nonsynonymous SNV 0.529 1 21 hm5C_associated_SNPs_1741 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chrX 69370124 69370124 1 + C T UCEC 69370124 + 69370104 69370144 41 GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTACCG GTGACTGGTATGAGCAACATTGGAAATATGGAGCATTACCG Direct Loss 1 0.795746835731228 1 0.611006498336792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370124 chrX:69370124 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_1742 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69370097-69370156
64251 chr17 77755539 77755539 1 + C T UCEC 77755539 + 77755519 77755559 41 CCGGAAGAGAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGC CCGGAAGAGAGGCAAGAGGCTGAGAGGCCGGCCAAGGAAGC Direct Loss 1 0.840094638683189 1 0.678892612457275 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755539 chr17:77755539 nonsynonymous SNV 0.852 4 21 hm5C_associated_SNPs_1745 0 0 4 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr5 72185767 72185767 1 + C T UCEC 72185767 + 72185747 72185787 41 CATTAGCAGATTCAGTAGGACATCATTTAAACAAACCAGTA CATTAGCAGATTCAGTAGGATATCATTTAAACAAACCAGTA Direct Loss 1 0.327587881980672 1 0.108445197343826 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185767 chr5:72185767 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1747 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185711-72185777
64251 chr16 57486774 57486774 1 + C T UCEC 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAGCAGTTGCAGCACTGCATCCTGACGGCAGCCCTT Direct Loss 1 0.618069909968197 1 0.873891472816467 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486774 nonsynonymous SNV 0.989 4 21 hm5C_associated_SNPs_1749 0 0 4 BUD13 POSTAR2 ENCODE chr16:57486763-57486834
64251 chr14 39650825 39650825 1 + C T UCEC 39650825 + 39650805 39650845 41 GTAGAAGTCGGAGTAGGGGCCGGGGACATAATAGAGATAGA GTAGAAGTCGGAGTAGGGGCTGGGGACATAATAGAGATAGA Direct Loss 1 0.768253418471748 1 0.882031202316284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650825 chr14:39650825 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1750 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr7 30640781 30640781 1 + C T UCEC 30640781 + 30640761 30640801 41 GAGGAACAGATCCTGGAGATCGATTGCACCATGCTCACCCC GAGGAACAGATCCTGGAGATTGATTGCACCATGCTCACCCC Direct Loss 1 0.50062968928682 1 0.347984433174133 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30640781 chr7:30640781 synonymous SNV . 0 21 hm5C_associated_SNPs_1753 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:30640724-30640789
64251 chr17 65735673 65735673 1 + C T UCEC 65735673 + 65735653 65735693 41 TTCCTGTACCTGAAGTGTAGCGAAAATGCTACTATGACTCT TTCCTGTACCTGAAGTGTAGTGAAAATGCTACTATGACTCT Direct Loss 1 0.650087292813442 1 0.578565835952759 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735673 chr17:65735673 synonymous SNV . 0 21 hm5C_associated_SNPs_1754 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65735642-65735673
64251 chr2 203157511 203157511 1 + C T UCEC 203157511 + 203157491 203157531 41 TTATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCT TTATACTAGGTGATTGAAATTTCTGAATATCGAACCCAGCT Direct Loss 1 0.495804438858356 1 0.247507780790329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157511 chr2:203157511 synonymous SNV . 0 21 hm5C_associated_SNPs_1755 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:203157492-203157572
64251 chr22 23438366 23438366 1 + C T UCEC 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGTGCATCGCCGCAGCTGACTAT Direct Loss 1 0.209399342186249 1 0.0680708289146423 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438366 nonsynonymous SNV 0.988 1 21 hm5C_associated_SNPs_1756 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr16 2087970 2087970 1 + C A UCEC 2087970 + 2087950 2087990 41 TGGAACAGGAAGCGTGAAATCTTCAGCAACTTCTGAGCCCC TGGAACAGGAAGCGTGAAATATTCAGCAACTTCTGAGCCCC Direct Loss 1 0.681288206722773 1 0.442643165588379 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2087970 chr16:2087970 synonymous SNV . 0 21 hm5C_associated_SNPs_1757 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2087944-2087977
64251 chr19 45803093 45803093 1 + C T UCEC 45803093 + 45803073 45803113 41 GCAGACGAACCTGAGAGAATCGGGGGACCTGAGGTCACAAG GCAGACGAACCTGAGAGAATTGGGGGACCTGAGGTCACAAG Direct Loss 1 0.901834356000308 1 0.89779257774353 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45803093 chr19:45803093 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1758 0 0 3 EFTUD2 POSTAR2 ENCODE chr19:45803023-45803098
64251 chr9 131455929 131455929 1 + C T UCEC 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGACGAAATGTTCGAGTCAAACGCAGAAT Direct Loss 1 0.119343750419303 1 0.112226098775864 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455929 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1761 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131455914-131455934
64251 chr7 131128390 131128390 1 + C T UCEC 131128390 + 131128370 131128410 41 GTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCT GTCAAACCTGGAAACTTCTTTGAGAGGACTCCTGTAATGCT Direct Loss 1 0.735755792202615 1 0.754134893417358 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131128390 chr7:131128390 stopgain 1.000 1 21 hm5C_associated_SNPs_1765 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:131128359-131128402
64251 chr19 13010519 13010519 1 + C T UCEC 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTCGTTTAGATGTGTTCCTTAAAAAGA Direct Loss 1 0.379911353690275 1 0.285151720046997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010519 stopgain . 0 21 hm5C_associated_SNPs_1766 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:13010496-13010530
64251 chr12 49666983 49666983 1 + C T UCEC 49666983 + 49666963 49667003 41 GTTGGAGCAGATAGTGCTGACGGAGAGGATGAGGGTGAAGA GTTGGAGCAGATAGTGCTGATGGAGAGGATGAGGGTGAAGA Direct Loss 1 0.71399368357924 1 0.484233438968658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666983 chr12:49666983 synonymous SNV . 0 21 hm5C_associated_SNPs_1768 0 0 40 TARDBP POSTAR2 DRA001158,DRS012387 chr12:49666873-49667072
64251 chr6 26204977 26204977 1 + C T UCEC 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCATTCGGCGCCTTGCTCGTCGCGG Direct Loss 1 0.601680176279686 1 0.935529351234436 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204977 synonymous SNV . 0 21 hm5C_associated_SNPs_1769 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr10 17271866 17271866 1 + C T UCEC 17271866 + 17271846 17271886 41 GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGG GCAAGTCGCGCCTGGGGGACTTCTACGAGGAGGAGATGCGG Direct Loss 1 0.701832722638422 1 0.220152139663696 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271866 chr10:17271866 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1770 0 0 22 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr10:17271827-17271872
64251 chr16 14041557 14041557 1 + C T UCEC 14041557 + 14041537 14041577 41 TTCCATCTCTGATCCATCGTCGGGGCATTGACATTGAACCC TTCCATCTCTGATCCATCGTTGGGGCATTGACATTGAACCC Direct Loss 1 0.758660563659663 1 0.868948101997375 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14041557 chr16:14041557 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1771 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:14041535-14041561
64251 chr5 131973793 131973793 1 + C T UCEC 131973793 + 131973773 131973813 41 ATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAAT ATATTGAATACATAGAAATATGGTCTGATGCCGATGAAAAT Direct Loss 1 0.0896428035054237 1 0.0634273290634155 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131973793 chr5:131973793 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_1772 1 0 2 AGGF1 POSTAR2 ENCODE chr5:131973772-131973814
64251 chr17 57733217 57733217 1 + C T UCEC 57733217 + 57733197 57733237 41 TTGATTTTCTTTCTGTAGATCAGTGAAAAGCATGATGTGGT TTGATTTTCTTTCTGTAGATTAGTGAAAAGCATGATGTGGT Direct Loss 1 0.0790438580410812 1 0.332433342933655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57733217 chr17:57733217 synonymous SNV . 0 21 hm5C_associated_SNPs_1773 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57733179-57733386
64251 chr11 129996710 129996710 1 + C T UCEC 129996710 + 129996690 129996730 41 CAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGTAAA CAGCTGGAGATTCGGCACCGTAACCGAATGGACAGGGTAAA Direct Loss 1 0.162095534061744 1 0.0320236682891846 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996710 chr11:129996710 synonymous SNV . 0 21 hm5C_associated_SNPs_1776 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr6 43189429 43189429 1 + C A UCEC 43189429 + 43189409 43189449 41 AGCTTCCTCCATAGCATGACCTGTGCCAAATGTAACCATGG AGCTTCCTCCATAGCATGACATGTGCCAAATGTAACCATGG Direct Loss 1 0.15362037148629 1 0.0661382079124451 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL9 ENSG00000112659 CDS Human protein_coding chr6:43189429 chr6:43189429 synonymous SNV . 0 21 hm5C_associated_SNPs_1777 0 0 1 RBM5 POSTAR2 ENCODE chr6:43189286-43189432
64251 chrX 135593877 135593877 1 + C T UCEC 135593877 + 135593857 135593897 41 AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAG AGATGAAAAGGGGCTTGAAGTTGCTGATAAAAAGGCGGAAG Direct Loss 1 0.720040211444198 1 0.151702493429184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593877 chrX:135593877 nonsynonymous SNV 0.276 1 21 hm5C_associated_SNPs_1778 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr2 233681725 233681725 1 + C T UCEC 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCGAGAGGAAGAAGAATTTGCCCGAAGGAAACAGGTA Direct Loss 1 0.127390583279903 1 0.160776138305664 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681725 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_1779 0 0 16 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr6 34823411 34823411 1 + C T UCEC 34823411 + 34823391 34823431 41 TAGGTGTCTCTGCCAACAGACTCATGGGTGGTGCCATGCAG TAGGTGTCTCTGCCAACAGATTCATGGGTGGTGCCATGCAG Direct Loss 1 0.191815592259712 1 0.339758992195129 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34823411 chr6:34823411 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1782 0 0 2 BUD13 POSTAR2 ENCODE chr6:34823395-34823459
64251 chr19 18254659 18254659 1 + C T UCEC 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC CAGCCCATCTCTCCTGAATATCATCAGCCTGGACACAATGC Direct Loss 1 0.0149116801000627 1 0.0372342765331268 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254659 nonsynonymous SNV 0.034 0 21 hm5C_associated_SNPs_1783 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:18254654-18254676
64251 chrX 153696537 153696537 1 + C T UCEC 153696537 + 153696517 153696557 41 CGCGTGCTCTTCCCGGGCATCGAGGCCCACCCGGTGCTCAA CGCGTGCTCTTCCCGGGCATTGAGGCCCACCCGGTGCTCAA Direct Loss 1 0.653194918341786 1 0.841401696205139 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696537 chrX:153696537 synonymous SNV . 0 21 hm5C_associated_SNPs_1784 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chr1 200818115 200818115 1 + C T UCEC 200818115 + 200818095 200818135 41 AAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTG AAACAGGGCTTCCACAGGGATGGGACACTACCCAGCTGTTG Direct Loss 1 0.843304205105163 1 0.734449744224548 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200818115 chr1:200818115 nonsynonymous SNV 0.931 3 21 hm5C_associated_SNPs_1785 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:200818095-200818134
64251 chr9 136224615 136224615 1 + C T UCEC 136224615 + 136224595 136224635 41 TGTTCTGCAAACTCACCCTGCGGCACATCAACAAGTGCCCA TGTTCTGCAAACTCACCCTGTGGCACATCAACAAGTGCCCA Direct Loss 1 0.633057583399615 1 0.209915906190872 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control SURF2 ENSG00000148291 CDS Human protein_coding chr9:136224615 chr9:136224615 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1786 0 0 3 BUD13 POSTAR2 ENCODE chr9:136224557-136224622
64251 chrX 16753431 16753431 1 + C T UCEC 16753431 + 16753411 16753451 41 AGCACAAACAATAAAGAAATCCGTAGAAGAAGGAAAAATAG AGCACAAACAATAAAGAAATTCGTAGAAGAAGGAAAAATAG Direct Loss 1 0.406960386211101 1 0.139512836933136 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16753431 chrX:16753431 nonsynonymous SNV 0.868 3 21 hm5C_associated_SNPs_1787 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16753368-16753442
64251 chr1 214503545 214503545 1 + C T UCEC 214503545 + 214503525 214503565 41 TATTGATCTCCTGTACCCAACGGAAGATAGAAATGACCGGT TATTGATCTCCTGTACCCAATGGAAGATAGAAATGACCGGT Direct Loss 1 0.64916650530401 1 0.653282999992371 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214503545 chr1:214503545 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1788 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:214503521-214503546
64251 chr3 58109014 58109014 1 + C A UCEC 58109014 + 58108994 58109034 41 CCCACAAAACCCGGGGAGTACTTCGTCAACATCCTCTTTGA CCCACAAAACCCGGGGAGTAATTCGTCAACATCCTCTTTGA Direct Loss 1 0.214638549208821 1 0.0923150181770325 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58109014 chr3:58109014 stopgain 0.932 1 21 hm5C_associated_SNPs_1789 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr3:58109014-58109015
64251 chr12 112227678 112227678 1 + C T UCEC 112227678 + 112227658 112227698 41 GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCTACAC GGGAAAACCATCCCCATTGATGGAGACTTCTTCAGCTACAC Direct Loss 1 0.740329724626599 1 0.864367365837097 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227678 chr12:112227678 synonymous SNV . 0 21 hm5C_associated_SNPs_1790 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112227652-112227684
64251 chr8 21859735 21859735 1 + C T UCEC 21859735 + 21859715 21859755 41 ACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCAT ACACCCCTGAACCAGGAGAGTGACCGCTTTCTGCACATCAT Direct Loss 1 0.31631037104995 1 0.108187198638916 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859735 chr8:21859735 synonymous SNV . 0 21 hm5C_associated_SNPs_1791 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:21859713-21859756
64251 chr3 160122141 160122141 1 + C T UCEC 160122141 + 160122121 160122161 41 GGATGATTATGAAGTCATTCCTAACAGTAATTTCTATGTAT GGATGATTATGAAGTCATTCTTAACAGTAATTTCTATGTAT Direct Loss 1 0.123068329912954 1 0.0621637105941772 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160122141 chr3:160122141 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1792 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160122128-160122179
64251 chr3 48506023 48506023 1 + C A UCEC 48506023 + 48506003 48506043 41 TTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC TTGGTGTGCAGAGCCCCTTGACCCCAGTCACTGGCTCCAAC Direct Loss 1 0.107023410100097 1 0.0233504176139832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506023 chr3:48506023 nonsynonymous SNV 0.133 0 21 hm5C_associated_SNPs_1794 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chrX 47092421 47092421 1 + C T UCEC 47092421 + 47092401 47092441 41 ATCTCGCACAGCTGCGTTGGCTGTAGAAGAGAACGGACGGC ATCTCGCACAGCTGCGTTGGTTGTAGAAGAGAACGGACGGC Direct Loss 1 0.723197261378559 1 0.24024897813797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47092421 chrX:47092421 synonymous SNV . 0 21 hm5C_associated_SNPs_1795 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47092418-47092445
64251 chr12 53647877 53647877 1 + C T UCEC 53647877 + 53647857 53647897 41 CTGCTGTCATGGTGATGGCTCTGCTGGCAGTGGTGGGACTC CTGCTGTCATGGTGATGGCTTTGCTGGCAGTGGTGGGACTC Direct Loss 1 0.60302877085229 1 0.244920969009399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647877 chr12:53647877 synonymous SNV . 0 21 hm5C_associated_SNPs_1796 0 0 1 SND1 POSTAR2 ENCODE chr12:53647831-53647894
64251 chr12 53515180 53515180 1 + C T UCEC 53515180 + 53515160 53515200 41 GCTACGTGTATCAGGATGGGCTGCGGGTATGGGCCCTGCAG GCTACGTGTATCAGGATGGGTTGCGGGTATGGGCCCTGCAG Direct Loss 1 0.680947657654512 1 0.480711162090302 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53515180 chr12:53515180 synonymous SNV . 0 21 hm5C_associated_SNPs_1797 0 0 3 LSM11 POSTAR2 ENCODE chr12:53515171-53515185
64251 chr7 150765105 150765105 1 + C T UCEC 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCTTCTGCAGTCTCCTGGAGCTCCGC Direct Loss 1 0.539163807674126 1 0.517969310283661 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765105 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1798 0 0 3 FXR2 POSTAR2 ENCODE chr7:150765038-150765110
64251 chr3 49742520 49742520 1 + C T UCEC 49742520 + 49742500 49742540 41 CAACCGCTTCCTCAGCACAGCGGCTGTGAGCCTCATGACCC CAACCGCTTCCTCAGCACAGTGGCTGTGAGCCTCATGACCC Direct Loss 1 0.449512675300533 1 0.24903804063797 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742520 chr3:49742520 nonsynonymous SNV 0.789 4 21 hm5C_associated_SNPs_1800 0 0 3 BUD13 POSTAR2 ENCODE chr3:49742485-49742526
64251 chr16 67671681 67671681 1 + C T UCEC 67671681 + 67671661 67671701 41 AGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGAGG AGAGCCAGATGCTGAGCCCGTAGAGGGAGAGGAAGAGGAGG Direct Loss 1 0.673328077456455 1 0.63357949256897 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671681 chr16:67671681 nonsynonymous SNV 0.099 0 21 hm5C_associated_SNPs_1801 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chrX 69353952 69353952 1 + C T UCEC 69353952 + 69353932 69353972 41 CTTGGACCTCCTTGAGAAGGCTGCCGAAATGTTATCGCAGC CTTGGACCTCCTTGAGAAGGTTGCCGAAATGTTATCGCAGC Direct Loss 1 0.489153971586058 1 0.245393484830856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353952 chrX:69353952 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_1802 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69353919-69353956
64251 chr11 74329739 74329739 1 + C T UCEC 74329739 + 74329719 74329759 41 ATGGCCCACCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAA ATGGCCCACCTGCATCCAAGTAGGTTTCCCAGCAGCCCAAA Direct Loss 1 0.788990613478092 1 0.285710334777832 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329739 chr11:74329739 stopgain 0.971 0 21 hm5C_associated_SNPs_1803 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr19 11145704 11145704 1 + C T UCEC 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGGAGGTGGAGTGGCTGACCTGTGAGGAGGAG Direct Loss 1 0.475044364462967 1 0.44091659784317 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145704 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1805 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chrX 41000586 41000586 1 + C T UCEC 41000586 + 41000566 41000606 41 TCAATGGAAAGATGAATGCACTGAATGAAGTTAATAAGGTG TCAATGGAAAGATGAATGCATTGAATGAAGTTAATAAGGTG Direct Loss 1 0.268560762815393 1 0.307134747505188 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41000586 chrX:41000586 synonymous SNV . 0 21 hm5C_associated_SNPs_1806 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41000566-41000675
64251 chr10 94109496 94109496 1 + C T UCEC 94109496 + 94109476 94109516 41 CAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTT CAGATCATGTCTCTGCTACTTGAATCTTGTGTGGAGCCCTT Direct Loss 1 0.445971476177622 1 0.313340246677399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94109496 chr10:94109496 stopgain 0.997 1 21 hm5C_associated_SNPs_1807 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:94109450-94109497
64251 chr19 58198728 58198728 1 + C A UCEC 58198728 + 58198708 58198748 41 AGTTCACACTGGAGAAAGGCCTTATGAATGTGGCGAGTGCG AGTTCACACTGGAGAAAGGCATTATGAATGTGGCGAGTGCG Direct Loss 1 0.0774738295542337 1 0.0381589233875275 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198728 chr19:58198728 nonsynonymous SNV 0.010 1 21 hm5C_associated_SNPs_1808 0 0 1 RPS5 POSTAR2 ENCODE chr19:58198727-58198782
64251 chr1 231386713 231386713 1 + C T UCEC 231386713 + 231386693 231386733 41 TGCCTTATCCACAGAAGGAGCTCAAAAAGTGGGATGAGTTT TGCCTTATCCACAGAAGGAGTTCAAAAAGTGGGATGAGTTT Direct Loss 1 0.45087792381523 1 0.716822445392609 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231386713 chr1:231386713 nonsynonymous SNV 0.977 0 21 hm5C_associated_SNPs_1809 0 0 5 LIN28A POSTAR2 GSE39873,GSM980594 chr1:231386700-231386720
64251 chr7 44806140 44806140 1 + C T UCEC 44806140 + 44806120 44806160 41 CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCG CAAACCCTCCCCCAGCGTCCTGGCAGTCCTTGGGCCAAGCG Direct Loss 1 0.628826593060187 1 0.115492343902588 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806140 chr7:44806140 nonsynonymous SNV 0.990 4 21 hm5C_associated_SNPs_1811 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44806112-44806158
64251 chr11 66278678 66278678 1 + C A UCEC 66278678 + 66278658 66278698 41 GGCCCTTTTGTTTTCCAGCGCTGGCAGATTTACATGGGGAT GGCCCTTTTGTTTTCCAGCGATGGCAGATTTACATGGGGAT Direct Loss 1 0.167467691208112 1 0.41266542673111 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66278678 chr11:66278678 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_1812 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:66278662-66278726
64251 chr14 60591543 60591543 1 + C T UCEC 60591543 + 60591523 60591563 41 AGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG AGTTCTATTAGGATACCCTGTTGTTGACAAAGGAAAACAAG Direct Loss 1 0.191864322248015 1 0.138024836778641 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591543 chr14:60591543 nonsynonymous SNV 0.995 0 21 hm5C_associated_SNPs_1813 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:60591507-60591545
64251 chr17 7479907 7479907 1 + C T UCEC 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCACGCCTGTATCGGGGGTACCAACGTGCGTGCTGAGGT Direct Loss 1 0.52762677343697 1 0.203270435333252 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479907 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_1815 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr7 151818003 151818003 1 + C T UCEC 151818003 + 151817983 151818023 41 CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG CTCGCTCATCAGACCCGCCATGGCTCATGAAATGCCACGGG Direct Loss 1 0.441771400283933 1 0.140844523906708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151818003 chr7:151818003 nonsynonymous SNV 0.980 3 21 hm5C_associated_SNPs_1816 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:151817994-151818016
64251 chr12 53664581 53664581 1 + C T UCEC 53664581 + 53664561 53664601 41 ACGGACCACATGGGGATGACCGGTTAGTGCCCTGGGTCCCA ACGGACCACATGGGGATGACTGGTTAGTGCCCTGGGTCCCA Direct Loss 1 0.321030599416509 1 0.595240712165833 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53664581 chr12:53664581 synonymous SNV . 0 21 hm5C_associated_SNPs_1817 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53664502-53664592
64251 chr13 103298646 103298646 1 + C T UCEC 103298646 + 103298626 103298666 41 GTAGTTTCCTCATTACAGCCCAGTGAGTGCAAAAACAAAAC GTAGTTTCCTCATTACAGCCTAGTGAGTGCAAAAACAAAAC Direct Loss 1 0.110818582985185 1 0.177913188934326 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103298646 chr13:103298646 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_1818 0 0 4 SF3A3 POSTAR2 ENCODE chr13:103298618-103298678
64251 chr9 37424938 37424938 1 + C T UCEC 37424938 + 37424918 37424958 41 GGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGAT GGCCTGCTCTGCCTCCTCTCTGACCACGTGGACAAGAGGAT Direct Loss 1 0.298517725220128 1 0.374989658594131 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424938 chr9:37424938 synonymous SNV . 0 21 hm5C_associated_SNPs_1819 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr16 30779624 30779624 1 + C A UCEC 30779624 + 30779604 30779644 41 AAGAAGGAGGAGCTGGTCCCCTCTGAAGAGGACTTCCAGGG AAGAAGGAGGAGCTGGTCCCATCTGAAGAGGACTTCCAGGG Direct Loss 1 0.49423069796913 1 0.574581861495972 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779624 chr16:30779624 synonymous SNV . 0 21 hm5C_associated_SNPs_1820 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30779599-30779631
64251 chr11 65273147 65273147 1 + C A UCEC 65273147 + 65273127 65273167 41 TTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAA TTTCAAGGTAACGATGGTGTAGAGGTCTTTGGTGGGTTGAA Direct Loss 1 0.785548366625481 1 0.79669451713562 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273147 chr11:65273147 . . 0 21 hm5C_associated_SNPs_1821 0 0 114 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65273080-65273160
64251 chr16 717579 717579 1 + C G UCEC 717579 + 717559 717599 41 GATCCTTGTGTGGGAGGTCCCCGGCCTCTGAGATGCAGCAG GATCCTTGTGTGGGAGGTCCGCGGCCTCTGAGATGCAGCAG Direct Loss 1 0.51326994399177 1 0.718670248985291 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:717579 chr16:717579 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_1822 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:717560-717580
64251 chr11 67052434 67052434 1 + C T UCEC 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCCCAACCGCCTCGAGTGGTGGGGCGAGGGCGAGGCCCCG Direct Loss 1 0.754594897717939 1 0.876265108585358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052434 nonsynonymous SNV 0.983 3 21 hm5C_associated_SNPs_1823 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr12 19427793 19427793 1 + C T UCEC 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CAGATCTTAGAGGTGGAAATTGCCCCAATACAGGGCCCTTA Direct Loss 1 0.433917392693879 1 0.221418350934982 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427793 nonsynonymous SNV 0.883 1 21 hm5C_associated_SNPs_1824 0 0 1 BUD13 POSTAR2 ENCODE chr12:19427768-19427916
64251 chr15 36989526 36989526 1 + C T UCEC 36989526 + 36989506 36989546 41 TTAACTGAAACTTCCCAGTGCCATTGGTCATGAGCATGAGG TTAACTGAAACTTCCCAGTGTCATTGGTCATGAGCATGAGG Direct Loss 1 0.0180515737584443 1 0.00844040513038635 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989526 chr15:36989526 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1826 0 0 1 DDX6 POSTAR2 ENCODE chr15:36989523-36989531
64251 chr14 103931971 103931971 1 + C T UCEC 103931971 + 103931951 103931991 41 AGCAATGAATTTACTGTTGGCGGTAAACTCGACACGTTTTG AGCAATGAATTTACTGTTGGTGGTAAACTCGACACGTTTTG Direct Loss 1 0.525903903370857 1 0.257576078176498 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK3 ENSG00000075413 CDS Human protein_coding chr14:103931971 chr14:103931971 synonymous SNV . 0 21 hm5C_associated_SNPs_1828 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103931957-103931981
64251 chr14 21553984 21553984 1 + C A UCEC 21553984 + 21553964 21554004 41 CAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGA CAAACTCAAGTGGACAAGTTATATTGCCCAGCTGCTGTGGA Direct Loss 1 0.129437585617279 1 0.0220528244972229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21553984 chr14:21553984 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1829 0 0 1 UCHL5 POSTAR2 ENCODE chr14:21553971-21554019
64251 chr11 9530377 9530377 1 + C A UCEC 9530377 + 9530357 9530397 41 GAGGAGGAGCAGGAAGCCTTCTTTGAGCCGCCCCCAGGTGA GAGGAGGAGCAGGAAGCCTTATTTGAGCCGCCCCCAGGTGA Direct Loss 1 0.422216198204079 1 0.164700508117676 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9530377 chr11:9530377 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1830 0 0 1 UCHL5 POSTAR2 ENCODE chr11:9530366-9530395
64251 chr1 120286596 120286596 1 + C T UCEC 120286596 + 120286576 120286616 41 CTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGG CTGGCACGTCATGGGCATCTTCTCCTTGCTGCCCAGCCTGG Direct Loss 1 0.145893506373084 1 0.113599389791489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286596 chr1:120286596 nonsynonymous SNV 0.992 5 21 hm5C_associated_SNPs_1831 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr17 64785043 64785043 1 + C T UCEC 64785043 + 64785023 64785063 41 CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAA CATGCCTTCTTCCGGAGGATTGACTGGGAAAAACTGGAGAA Direct Loss 1 0.306153496263412 1 0.19218173623085 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785043 chr17:64785043 synonymous SNV . 0 21 hm5C_associated_SNPs_1832 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr14 67786966 67786966 1 + C A UCEC 67786966 + 67786946 67786986 41 GATTATGACAACGAGGAGATCTTAACCTATGAGGAAATGTC GATTATGACAACGAGGAGATATTAACCTATGAGGAAATGTC Direct Loss 1 0.196672508677509 1 0.115452021360397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPP5 ENSG00000072415 CDS Human protein_coding chr14:67786966 chr14:67786966 synonymous SNV . 0 21 hm5C_associated_SNPs_1833 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr14:67786949-67786972
64251 chr1 87805775 87805775 1 + C T UCEC 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCGCCTGGTCCCGGGAGATTGGTTTCACTACATCAATGGC Direct Loss 1 0.383324986964634 1 0.311724603176117 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805775 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1834 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chrX 102632726 102632726 1 + C T UCEC 102632726 + 102632706 102632746 41 AGCTCTCTAATCACCATGACCATCATGATGAATTTTGCCTT AGCTCTCTAATCACCATGACTATCATGATGAATTTTGCCTT Direct Loss 1 0.510567902134582 1 0.0405519604682922 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632726 chrX:102632726 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1836 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr4 48384660 48384660 1 + C A UCEC 48384660 + 48384640 48384680 41 CAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTG CAATTCTACAAGACGGGGTAATTTTAGTGATCAGGAACTTG Direct Loss 1 0.024417024423135 1 0.0172099769115448 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384660 chr4:48384660 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1837 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:48384639-48384666
64251 chr12 104336862 104336862 1 + C A UCEC 104336862 + 104336842 104336882 41 AATTTTGTAGGCTGAATCTTCTCCATTTGTTGAGCGACTTC AATTTTGTAGGCTGAATCTTATCCATTTGTTGAGCGACTTC Direct Loss 1 0.759437400362018 1 0.792777895927429 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336862 chr12:104336862 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1838 0 0 40 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:104336849-104336945
64251 chr1 28564465 28564465 1 + C T UCEC 28564465 + 28564445 28564485 41 GAGCGCCATAAGCAGAAGATCAAAATGCTAAAACATGATGA GAGCGCCATAAGCAGAAGATTAAAATGCTAAAACATGATGA Direct Loss 1 0.839391632964134 1 0.417722046375275 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATPIF1 ENSG00000130770 CDS Human protein_coding chr1:28564465 chr1:28564465 synonymous SNV . 0 21 hm5C_associated_SNPs_1839 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr1:28564350-28564468
64251 chr20 44430647 44430647 1 + C T UCEC 44430647 + 44430627 44430667 41 TTTTGTGGCAGAGGAAAGGACGGCCTCCTGGACACATCCTG TTTTGTGGCAGAGGAAAGGATGGCCTCCTGGACACATCCTG Direct Loss 1 0.481029074390662 1 0.149988681077957 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44430647 chr20:44430647 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1843 0 0 3 DDX6 POSTAR2 ENCODE chr20:44430638-44430682
64251 chr3 49728616 49728616 1 + C T UCEC 49728616 + 49728596 49728636 41 AGGATGGCATCCAAGGGGGCCGGCATGTCTTTCTCCCGCAA AGGATGGCATCCAAGGGGGCTGGCATGTCTTTCTCCCGCAA Direct Loss 1 0.555570250678444 1 0.341594696044922 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49728616 chr3:49728616 synonymous SNV . 0 21 hm5C_associated_SNPs_1845 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:49728594-49728633
64251 chr17 37070657 37070657 1 + C T UCEC 37070657 + 37070637 37070677 41 GGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC GGAGCCAGAGCGTCGGGATTTACAGGACGGCAGCAGCTACC Direct Loss 1 0.77790683452812 1 0.356585621833801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070657 chr17:37070657 nonsynonymous SNV 0.136 1 21 hm5C_associated_SNPs_1847 0 0 10 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:37070640-37070660
64251 chr10 80968135 80968135 1 + C T UCEC 80968135 + 80968115 80968155 41 TCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGAC TCCACAATGCCGCCACGGAGTTGCTGGACTGGTGCGGAGAC Direct Loss 1 0.338382541057183 1 0.0937794148921967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:80968135 chr10:80968135 synonymous SNV . 0 21 hm5C_associated_SNPs_1848 0 0 4 FASTKD2 POSTAR2 ENCODE chr10:80968108-80968178
64251 chr14 23240646 23240646 1 + C A UCEC 23240646 + 23240626 23240666 41 TTCTCTTCTCCCCTCAGGTCCTTTACGACAGACCTTTACCC TTCTCTTCTCCCCTCAGGTCATTTACGACAGACCTTTACCC Direct Loss 1 0.118655392432452 1 0.152046382427216 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240646 chr14:23240646 nonsynonymous SNV 0.866 4 21 hm5C_associated_SNPs_1849 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr14:23240640-23240660
64251 chr17 73780936 73780936 1 + C T UCEC 73780936 + 73780916 73780956 41 ACTGAATAATAAAAGGGGAGCGGCGAAGAGGCAGGAAGACA ACTGAATAATAAAAGGGGAGTGGCGAAGAGGCAGGAAGACA Direct Loss 1 0.566231432468186 1 0.461176246404648 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73780936 chr17:73780936 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_1850 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:73780920-73780940
64251 chr11 244747 244747 1 + C A UCEC 244747 + 244727 244767 41 TAAAATTAAACATCGGGGACCTACAGGTTACAAAGGTGAGA TAAAATTAAACATCGGGGACATACAGGTTACAAAGGTGAGA Direct Loss 1 0.320695190060602 1 0.153419941663742 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:244747 chr11:244747 nonsynonymous SNV 0.970 1 21 hm5C_associated_SNPs_1851 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:244723-244752
64251 chr19 39215182 39215182 1 + C T UCEC 39215182 + 39215162 39215202 41 GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATG GCCAGGCCAATGTTGTGGGGTCCTGGATCCAGACCAAGATG Direct Loss 1 0.111466157605859 1 0.0354570150375366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215182 chr19:39215182 nonsynonymous SNV 0.997 0 21 hm5C_associated_SNPs_1852 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr14 102478270 102478270 1 + C T UCEC 102478270 + 102478250 102478290 41 CCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCATGG CCTGATGATGGTGGGGCCCTTGGGAAGTGGGAAGAGCATGG Direct Loss 1 0.732152279120549 1 0.664927840232849 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478270 chr14:102478270 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_1853 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102478245-102478285
64251 chr1 91980446 91980446 1 + C T UCEC 91980446 + 91980426 91980466 41 AAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAGTGCTG AAAAAAGAAGGCTATTTCTATAAAAGTTATGAATAGTGCTG Direct Loss 1 0.662193300767381 1 0.488341748714447 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980446 chr1:91980446 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_1854 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:91980440-91980460
64251 chr1 120286594 120286594 1 + C A UCEC 120286594 + 120286574 120286614 41 ACCTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCT ACCTGGCACGTCATGGGCATATCCTCCTTGCTGCCCAGCCT Direct Loss 1 0.496652276557494 1 0.12062531709671 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286594 chr1:120286594 synonymous SNV . 0 21 hm5C_associated_SNPs_1855 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr18 8638254 8638254 1 + C A UCEC 8638254 + 8638234 8638274 41 CCAAGACCACATGTCCGATGCTGTTGATTTCCTACTTTGGA CCAAGACCACATGTCCGATGATGTTGATTTCCTACTTTGGA Direct Loss 1 0.197607636759139 1 0.0753391087055206 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB12 ENSG00000206418 CDS Human protein_coding chr18:8638254 chr18:8638254 stopgain 0.999 0 21 hm5C_associated_SNPs_1856 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:8638240-8638260
64251 chr20 2097414 2097414 1 + C T UCEC 2097414 + 2097394 2097434 41 GTATGTCCTGTCCCGGAGGCCAGACCCAGCCACCAACAAAA GTATGTCCTGTCCCGGAGGCTAGACCCAGCCACCAACAAAA Direct Loss 1 0.108676375058643 1 0.383680820465088 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STK35 ENSG00000125834 CDS Human protein_coding chr20:2097414 chr20:2097414 nonsynonymous SNV 0.884 1 21 hm5C_associated_SNPs_1857 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:2097400-2097435
64251 chr11 9462065 9462065 1 + C A UCEC 9462065 + 9462045 9462085 41 AGAATATTTGGAGATTCTGGCTAAGCAGGCTGGTGAAGATG AGAATATTTGGAGATTCTGGATAAGCAGGCTGGTGAAGATG Direct Loss 1 0.366354374766609 1 0.0517131686210632 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462065 chr11:9462065 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_1858 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9462046-9462127
64251 chr15 50789404 50789404 1 + C T UCEC 50789404 + 50789384 50789424 41 AGAAATCTGGAAGTTACCACCTGTGCTTTTAGTGCATCTGA AGAAATCTGGAAGTTACCACTTGTGCTTTTAGTGCATCTGA Direct Loss 1 0.309107956096381 1 0.24235337972641 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50789404 chr15:50789404 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_1860 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:50789378-50789414
64251 chr16 2284212 2284212 1 + C T UCEC 2284212 + 2284192 2284232 41 GCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCTCAA GCGCAGTGTGGCAAGGCCTTTCCCAAGGCCTACCTGCTCAA Direct Loss 1 0.638001238225506 1 0.390210270881653 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284212 chr16:2284212 synonymous SNV . 0 21 hm5C_associated_SNPs_1861 0 0 1 PPIG POSTAR2 ENCODE chr16:2284171-2284219
64251 chr1 44436760 44436760 1 + C A UCEC 44436760 + 44436740 44436780 41 CTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG CTTCGTGCTTCGTCAACGTTATGTGGCCTTGGAGCTCTGTG Direct Loss 1 0.444777453515401 1 0.152355968952179 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436760 chr1:44436760 nonsynonymous SNV 0.004 1 21 hm5C_associated_SNPs_1862 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44436739-44436777
64251 chr1 223943292 223943292 1 + C T UCEC 223943292 + 223943272 223943312 41 TGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATG TGGGGCTCATTCAGAAGCACTGACGGCGGCAGAGGAAGATG Direct Loss 1 0.640768817144924 1 0.110904395580292 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943292 chr1:223943292 stopgain 1.000 1 21 hm5C_associated_SNPs_1864 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr1 32626288 32626288 1 + C T UCEC 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACGTCTTGAACTGTTCCATCTTTAATCCTTTGTTAACGTGA Direct Loss 1 0.162116773125055 1 0.696534335613251 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626288 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1865 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32626227-32626297
64251 chr22 42301542 42301542 1 + C T UCEC 42301542 + 42301522 42301562 41 TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA TCCTCTCCTCCCCGGGCCAGTGGGCAGTGCTGCTGGCCGAA Direct Loss 1 0.663797595294324 1 0.848089456558228 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301542 chr22:42301542 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1867 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr19 42373186 42373186 1 + C T UCEC 42373186 + 42373166 42373206 41 GGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAG GGGGGACGTCAGAGAAACGGTGTCATGCCCAGCCACTTCAG Direct Loss 1 0.691370562251308 1 0.504568040370941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373186 chr19:42373186 nonsynonymous SNV 0.990 1 21 hm5C_associated_SNPs_1868 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 13054422 13054422 1 + C T UCEC 13054422 + 13054402 13054442 41 TACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAA TACGCTGAGGAGTTTGGCAATGAGACGTGGGGCGTAACAAA Direct Loss 1 0.857191908815068 1 0.539824068546295 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054422 chr19:13054422 synonymous SNV . 0 21 hm5C_associated_SNPs_1869 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr10 75542205 75542205 1 + C G UCEC 75542205 + 75542185 75542225 41 GCCGCGAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTTT GCCGCGAGGGCTCAGGTGACGGATGGCTCCTGGGGTGCTTT Direct Loss 1 0.755964817821058 1 0.820536732673645 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542205 chr10:75542205 synonymous SNV . 0 21 hm5C_associated_SNPs_1870 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:75542124-75542206
64251 chr7 4796801 4796801 1 + C T UCEC 4796801 + 4796781 4796821 41 TCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCAAGGTA TCCTGCTTCCGCACCCCCTTTGGGCCTCTGTCCTCAAGGTA Direct Loss 1 0.350557859811617 1 0.528709232807159 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796801 chr7:4796801 synonymous SNV . 0 21 hm5C_associated_SNPs_1872 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:4796778-4796809
64251 chr17 37359313 37359313 1 + C T UCEC 37359313 + 37359293 37359333 41 TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATAC TGAGGAGAATGAGGATTTTGTGCCGGCTGCTCAGAAGATAC Direct Loss 1 0.795534344937574 1 0.0734512805938721 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359313 chr17:37359313 nonsynonymous SNV 0.621 1 21 hm5C_associated_SNPs_1873 0 0 62 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr15 43668796 43668796 1 + C T UCEC 43668796 + 43668776 43668816 41 TCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGA TCTGTTTTGCAGCCTTATCGTCAAGCACTGCTTGATTTGGA Direct Loss 1 0.264009475614489 1 0.492628633975983 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43668796 chr15:43668796 synonymous SNV . 0 21 hm5C_associated_SNPs_1874 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:43668745-43668819
64251 chr15 41192202 41192202 1 + C T UCEC 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCTGAGATGTCTGGCGCACCTAT Direct Loss 1 0.776829198960494 1 0.717482805252075 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192202 stopgain 0.996 1 21 hm5C_associated_SNPs_1875 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr22 29695781 29695781 1 + C T UCEC 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGCCCCCTGGACTTTTGATGGAACAGATGGGAG Direct Loss 1 0.433183720268463 1 0.375703513622284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695781 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1876 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr16 31196312 31196312 1 + C T UCEC 31196312 + 31196292 31196332 41 AGTGGTGGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCA AGTGGTGGTGGCAGTGGTGGTGGTTATGGCAATCAAGACCA Direct Loss 1 0.603455157147072 1 0.408516198396683 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FUS ENSG00000089280 CDS Human protein_coding chr16:31196312 chr16:31196312 synonymous SNV . 0 21 hm5C_associated_SNPs_1877 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31196296-31196319
64251 chr20 36662465 36662465 1 + C A UCEC 36662465 + 36662445 36662485 41 CCACCGCAAGCACGCGGGACCCATCGTCTCCGTGTGGCACC CCACCGCAAGCACGCGGGACACATCGTCTCCGTGTGGCACC Direct Loss 1 0.162229877993705 1 0.0288699269294739 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPRD1B ENSG00000101413 CDS Human protein_coding chr20:36662465 chr20:36662465 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_1878 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:36662454-36662478
64251 chr4 119200355 119200355 1 + C T UCEC 119200355 + 119200335 119200375 41 GATTGTGAATCTCCATGTATCTTTGGGACCTGTCAGCCGTG GATTGTGAATCTCCATGTATTTTTGGGACCTGTCAGCCGTG Direct Loss 1 0.205775433322087 1 0.0143299102783203 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200355 chr4:119200355 . . 0 21 hm5C_associated_SNPs_1880 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr14 64909115 64909115 1 + C T UCEC 64909115 + 64909095 64909135 41 TCAAGATGCACGGGGGCGGCCCCACGGTGAGTGGTGGGTTG TCAAGATGCACGGGGGCGGCTCCACGGTGAGTGGTGGGTTG Direct Loss 1 0.248495117732892 1 0.495177239179611 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909115 chr14:64909115 nonsynonymous SNV 0.970 2 21 hm5C_associated_SNPs_1881 0 0 3 FXR2 POSTAR2 ENCODE chr14:64909092-64909121
64251 chr1 100740467 100740467 1 + C A UCEC 100740467 + 100740447 100740487 41 ATAAATTTAACTGAGCGTGGCTGTGTGACTAAGATATATGG ATAAATTTAACTGAGCGTGGATGTGTGACTAAGATATATGG Direct Loss 1 0.235705421531036 1 0.133371025323868 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100740467 chr1:100740467 synonymous SNV . 0 21 hm5C_associated_SNPs_1882 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:100740435-100740476
64251 chr17 73058313 73058313 1 + C T UCEC 73058313 + 73058293 73058333 41 AATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAA AATAATTCTACCAATGGCATTGTCATAGAGCCGAGCGAAAA Direct Loss 1 0.338328814519496 1 0.286021709442139 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73058313 chr17:73058313 synonymous SNV . 0 21 hm5C_associated_SNPs_1883 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:73058287-73058319
64251 chr17 37360824 37360824 1 + C T UCEC 37360824 + 37360804 37360844 41 AGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGCCTCCAG AGACCAAGGAAGCACGCAAGTGCCGTGAAGAGCGCCTCCAG Direct Loss 1 0.909390325205615 1 0.28157103061676 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360824 chr17:37360824 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1884 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr7 16823094 16823094 1 + C T UCEC 16823094 + 16823074 16823114 41 GAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT GAACCAGAAAGACCCCCGCGTGAATCCTAGTGCATTCCTTT Direct Loss 1 0.181942657601192 1 0.0685073137283325 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823094 chr7:16823094 nonsynonymous SNV 0.925 2 21 hm5C_associated_SNPs_1885 0 0 2 U2AF2 POSTAR2 ENCODE chr7:16823026-16823106
64251 chr17 40714704 40714704 1 + C T UCEC 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTCGCTTGGCCTCCATCCTGACCTCG Direct Loss 1 0.547633130594414 1 0.326732277870178 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714704 synonymous SNV . 0 21 hm5C_associated_SNPs_1886 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:40714693-40714710
64251 chr5 71491927 71491927 1 + C T UCEC 71491927 + 71491907 71491947 41 CCTGAGGAGCTGGAGCCCGTCGAGAAGCAGGGAGTAGACGA CCTGAGGAGCTGGAGCCCGTTGAGAAGCAGGGAGTAGACGA Direct Loss 1 0.852629270401082 1 0.47182109951973 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491927 chr5:71491927 synonymous SNV . 0 21 hm5C_associated_SNPs_1887 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71491898-71491930
64251 chr19 18542868 18542868 1 + C T UCEC 18542868 + 18542848 18542888 41 CCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGGTAAGAGT CCTCCTCGTGGCATGGCCAGTGTGGGGCCCCAGGTAAGAGT Direct Loss 1 0.493880485633419 1 0.5982306599617 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18542868 chr19:18542868 synonymous SNV . 0 21 hm5C_associated_SNPs_1889 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18542838-18542880
64251 chr1 40878720 40878720 1 + C T UCEC 40878720 + 40878700 40878740 41 GACAAGTGGAAAAGAGGGAGCGAACCAGTTCCAGAAAAAAA GACAAGTGGAAAAGAGGGAGTGAACCAGTTCCAGAAAAAAA Direct Loss 1 0.0703974052541144 1 0.24005338549614 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40878720 chr1:40878720 synonymous SNV . 0 21 hm5C_associated_SNPs_1891 0 0 4 U2AF2 POSTAR2 ENCODE chr1:40878670-40878732
64251 chr2 32824931 32824931 1 + C T UCEC 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGGTGGTCATAGTGTGCGATTCAATCCAAACCT Direct Loss 1 0.117186892755476 1 0.475488007068634 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824931 synonymous SNV . 0 21 hm5C_associated_SNPs_1892 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr6 142758630 142758630 1 + C T UCEC 142758630 + 142758610 142758650 41 ATGTTCAGAAACAGTGGCGGCAGCATCTCTGCTGTGGTAGA ATGTTCAGAAACAGTGGCGGTAGCATCTCTGCTGTGGTAGA Direct Loss 1 0.423878816846914 1 0.175031304359436 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142758630 chr6:142758630 stopgain 0.991 1 21 hm5C_associated_SNPs_1893 0 0 2 IGF2BP1 POSTAR2 ENCODE chr6:142758609-142758656
64251 chr1 168154103 168154103 1 + C T UCEC 168154103 + 168154083 168154123 41 GGGAACCTTACTTGGAGAATCTCTTAAGTTAAAGGTAAATC GGGAACCTTACTTGGAGAATTTCTTAAGTTAAAGGTAAATC Direct Loss 1 0.253615203342293 1 0.0755758583545685 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TIPRL ENSG00000143155 CDS Human protein_coding chr1:168154103 chr1:168154103 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1894 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:168154081-168154105
64251 chr3 138341068 138341068 1 + C T UCEC 138341068 + 138341048 138341088 41 TGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGG TGGATGTTCAAATTAGTGGGTAAAGAAACATTCTATGTTGG Direct Loss 1 0.140219609173568 1 0.365799367427826 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138341068 chr3:138341068 synonymous SNV . 0 21 hm5C_associated_SNPs_1895 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr3:138341038-138341081
64251 chr5 65105431 65105431 1 + C T UCEC 65105431 + 65105411 65105451 41 GAAAATTGGGTGTGGGACGTCGATTCCCTCCGAAGATTGTC GAAAATTGGGTGTGGGACGTTGATTCCCTCCGAAGATTGTC Direct Loss 1 0.12830725183925 1 0.13911846280098 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65105431 chr5:65105431 synonymous SNV . 0 21 hm5C_associated_SNPs_1896 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr5:65105411-65105434
64251 chr10 104141008 104141008 1 + C A UCEC 104141008 + 104140988 104141028 41 ATTCCATCTGAGCTGGGGGCCTGTGGTGAGTCTCTCTAGCC ATTCCATCTGAGCTGGGGGCATGTGGTGAGTCTCTCTAGCC Direct Loss 1 0.32695330983463 1 0.221174627542496 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104141008 chr10:104141008 synonymous SNV . 0 21 hm5C_associated_SNPs_1899 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:104140987-104141010
64251 chr1 224380097 224380097 1 + C T UCEC 224380097 + 224380077 224380117 41 ACAATTCCTGGATAAAAGTACTGTATGATTTTGTGATGGAT ACAATTCCTGGATAAAAGTATTGTATGATTTTGTGATGGAT Direct Loss 1 0.34857743865689 1 0.129966378211975 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DEGS1 ENSG00000143753 CDS Human protein_coding chr1:224380097 chr1:224380097 synonymous SNV . 0 21 hm5C_associated_SNPs_1900 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:224380047-224380120
64251 chr18 77096680 77096680 1 + C T UCEC 77096680 + 77096660 77096700 41 CCTCGTGGTTGCAAAGAAGGCGTTGACAGAGGAGCAGTACC CCTCGTGGTTGCAAAGAAGGTGTTGACAGAGGAGCAGTACC Direct Loss 1 0.196850870586474 1 0.112528890371323 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP9B ENSG00000166377 CDS Human protein_coding chr18:77096680 chr18:77096680 nonsynonymous SNV 0.041 0 21 hm5C_associated_SNPs_1904 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:77096672-77096700
64251 chr7 98528424 98528424 1 + C A UCEC 98528424 + 98528404 98528444 41 AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTA AGACATTCCTGAAAGCACTTATCTTTGTCATGATGGACTTA Direct Loss 1 0.0494839847623343 1 0.0976400077342987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528424 chr7:98528424 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_1908 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr3 186338682 186338682 1 + C A UCEC 186338682 + 186338662 186338702 41 TGCTGCTGGGCCAGTGGTTCCTCCATGTCCGGGGAGGATCA TGCTGCTGGGCCAGTGGTTCATCCATGTCCGGGGAGGATCA Direct Loss 1 0.87876725321718 1 0.957979679107666 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AHSG ENSG00000145192 CDS Human protein_coding chr3:186338682 chr3:186338682 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_1909 0 0 8 LARP4 POSTAR2 ENCODE chr3:186338673-186338699
64251 chr20 4680555 4680555 1 + C T UCEC 4680555 + 4680535 4680575 41 GGCCTATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT GGCCTATTACCAGAGAGGATTGAGCATGGTCCTCTTCTCCT Direct Loss 1 0.690316803166867 1 0.186719685792923 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4680555 chr20:4680555 nonsynonymous SNV 0.018 3 21 hm5C_associated_SNPs_1910 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:4680518-4680556
64251 chr17 17046982 17046982 1 + C T UCEC 17046982 + 17046962 17047002 41 GTCCACGGAGCCCTCCGTGACGGTGAGCCCAGGCGCCGCGT GTCCACGGAGCCCTCCGTGATGGTGAGCCCAGGCGCCGCGT Direct Loss 1 0.548069104166396 1 0.367726922035217 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17046982 chr17:17046982 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1912 0 0 6 EIF3D POSTAR2 ENCODE chr17:17046883-17046984
64251 chrX 48457774 48457774 1 + C T UCEC 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGGGCCTGTGGGCACCGTCGTTCTGTC Direct Loss 1 0.703154310648831 1 0.583287477493286 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457774 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_1913 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chr9 138378966 138378966 1 + C G UCEC 138378966 + 138378946 138378986 41 ACCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT ACCGCTCTTGGGACAGGGGGGCCAGCCAGGCCAGAGGTGCT Direct Loss 1 0.0887959039915314 1 0.290611356496811 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378966 chr9:138378966 synonymous SNV . 0 21 hm5C_associated_SNPs_1914 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr19 19308370 19308370 1 + C T UCEC 19308370 + 19308350 19308390 41 CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC CCAGACGAGCGCGGCTTCACTCCCCTCATCTGGGCCTCCGC Direct Loss 1 0.363455371708665 1 0.19359615445137 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308370 chr19:19308370 synonymous SNV . 0 21 hm5C_associated_SNPs_1915 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr17 57644036 57644036 1 + C A UCEC 57644036 + 57644016 57644056 41 AGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA AGGAACTACTCCAACTTTTCATATTCAGAAACAAAGAAAAA Direct Loss 1 0.103087010138734 1 0.0554591417312622 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX40 ENSG00000108406 CDS Human protein_coding chr17:57644036 chr17:57644036 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1918 0 0 14 NOP58 POSTAR2 GSE43666,GSM1067862 chr17:57644018-57644038
64251 chr4 148786063 148786063 1 + C T UCEC 148786063 + 148786043 148786083 41 CTCTCGAGTATGTGTGTAAGCTGCAGGAAATCCAAGAAAGA CTCTCGAGTATGTGTGTAAGTTGCAGGAAATCCAAGAAAGA Direct Loss 1 0.808318336060508 1 0.247852057218552 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGAP10 ENSG00000071205 CDS Human protein_coding chr4:148786063 chr4:148786063 synonymous SNV . 0 21 hm5C_associated_SNPs_1920 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:148786034-148786078
64251 chr2 74315033 74315033 1 + C T UCEC 74315033 + 74315013 74315053 41 AGGCCACCACTGCCAGAACGCTGTGATCGTCATCCTCATCC AGGCCACCACTGCCAGAACGTTGTGATCGTCATCCTCATCC Direct Loss 1 0.444634262320806 1 0.0747027099132538 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74315033 chr2:74315033 nonsynonymous SNV 0.881 3 21 hm5C_associated_SNPs_1922 0 0 1 YBX3 POSTAR2 ENCODE chr2:74315026-74315090
64251 chr16 3712061 3712061 1 - G A UCEC 3712061 - 3712041 3712081 41 GGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAG GGGCTGCCCGCCACTTCCTGTGCATGCAGCAGCTGGCCAAG Direct Loss 1 0.544952163221277 1 0.158577531576157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712061 chr16:3712061 nonsynonymous SNV 0.988 4 21 hm5C_associated_SNPs_1924 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr5 153760010 153760010 1 + C T UCEC 153760010 + 153759990 153760030 41 ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCGCAAG ATCTCTTGGCTTCTTCAGACTGCATTGCTCGGAACCGCAAG Direct Loss 1 0.203729487324871 1 0.186191260814667 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760010 chr5:153760010 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_1925 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760007-153760011
64251 chr11 830308 830308 1 + C T UCEC 830308 + 830288 830328 41 ACGAGGAGACGGAGCAGCTTCGGGAGCAGAGCCGGCGCCCG ACGAGGAGACGGAGCAGCTTTGGGAGCAGAGCCGGCGCCCG Direct Loss 1 0.971912811414856 1 0.96701055765152 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:830308 chr11:830308 nonsynonymous SNV 0.020 3 21 hm5C_associated_SNPs_1926 0 0 2 BUD13 POSTAR2 ENCODE chr11:830255-830313
64251 chr7 44685003 44685003 1 + C T UCEC 44685003 + 44684983 44685023 41 CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGT CAGAGTCCCCTTCCCCTGAGTCGAGGCTCCCTGGCTGCTGT Direct Loss 1 0.286540598993007 1 0.598080277442932 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44685003 chr7:44685003 synonymous SNV . 0 21 hm5C_associated_SNPs_1927 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44684987-44685021
64251 chr7 79842156 79842156 1 + C A UCEC 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATCAAAAAGAGCCATCTCACTATATGCTATCCAG Direct Loss 1 0.139139533083058 1 0.0589029490947723 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842156 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1928 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr9 107515213 107515213 1 + C T UCEC 107515213 + 107515193 107515233 41 TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT TTGCTCATCGAACTGAAGTTTGGAAAGCCTTGGCCAAAGAT Direct Loss 1 0.740704255324332 1 0.858660221099854 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107515213 chr9:107515213 nonsynonymous SNV 0.925 4 21 hm5C_associated_SNPs_1929 0 0 1 RPS3 POSTAR2 ENCODE chr9:107515197-107515237
64251 chrX 47083814 47083814 1 + C A UCEC 47083814 + 47083794 47083834 41 CGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGG CGAGGACTTGAAGATGGGGTATGATGGGGAGAGTGACCAGG Direct Loss 1 0.437893388891663 1 0.0636888742446899 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083814 chrX:47083814 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1930 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47083782-47083848
64251 chr9 123898159 123898159 1 + C A UCEC 123898159 + 123898139 123898179 41 TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAAGCTGAG TGCAGCAGACCCAGGGAGATATCAGTGCCTATGAAGCTGAG Direct Loss 1 0.642902061417817 1 0.525525152683258 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898159 chr9:123898159 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1931 0 0 11 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr5 7885875 7885875 1 + C A UCEC 7885875 + 7885855 7885895 41 GATCTGCCCTAACAGTGATTCTGAGGTACAAAGCCTACTCC GATCTGCCCTAACAGTGATTATGAGGTACAAAGCCTACTCC Direct Loss 1 0.785959233318093 1 0.399027854204178 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885875 chr5:7885875 nonsynonymous SNV 0.802 1 21 hm5C_associated_SNPs_1932 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr21 47986588 47986588 1 + C T UCEC 47986588 + 47986568 47986608 41 ATCCGAGCACACAGGAGCATCGCTGAGTGGTAAGAGCCCAG ATCCGAGCACACAGGAGCATTGCTGAGTGGTAAGAGCCCAG Direct Loss 1 0.366026119055118 1 0.309647262096405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47986588 chr21:47986588 synonymous SNV . 0 21 hm5C_associated_SNPs_1934 0 0 2 PPIG POSTAR2 ENCODE chr21:47986560-47986588
64251 chr14 102499719 102499719 1 + C T UCEC 102499719 + 102499699 102499739 41 AACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCAT AACGAGGTGGAGCAGATGATTCGAGACCTGGAAGCCAGCAT Direct Loss 1 0.187467240188991 1 0.866860449314117 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499719 chr14:102499719 synonymous SNV . 0 21 hm5C_associated_SNPs_1936 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr21 47771442 47771442 1 + C T UCEC 47771442 + 47771422 47771462 41 ATTCTGCCAGGACCAGTAGACAGGAATTGAGTGGTGAGGAA ATTCTGCCAGGACCAGTAGATAGGAATTGAGTGGTGAGGAA Direct Loss 1 0.664269756924517 1 0.79806512594223 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47771442 chr21:47771442 stopgain 0.105 0 21 hm5C_associated_SNPs_1937 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:47771420-47771453
64251 chrX 110951614 110951614 1 + C T UCEC 110951614 + 110951594 110951634 41 TTGCCTCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAAC TTGCCTCTTTCGGGCCATTTTGGAGCAGGTAAAAGGAAAAC Direct Loss 1 0.732581992401221 1 0.840558648109436 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951614 chrX:110951614 nonsynonymous SNV 0.979 2 21 hm5C_associated_SNPs_1938 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:110951576-110951621
64251 chr1 39927585 39927585 1 + C T UCEC 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTAGAGATGACTGTTGTGGCTGACATTTTCGACC Direct Loss 1 0.137681655605855 1 0.0689498484134674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927585 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_1939 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927571-39927596
64251 chr10 76468126 76468126 1 + C T UCEC 76468126 + 76468106 76468146 41 AGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCA AGCCTCTGACTGAATGTATCTGTGCTGGCCACTATGCAGCA Direct Loss 1 0.402857880937394 1 0.463680446147919 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADK ENSG00000156110 CDS Human protein_coding chr10:76468126 chr10:76468126 nonsynonymous SNV 0.996 2 21 hm5C_associated_SNPs_1941 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr10:76468091-76468127
64251 chr9 108510356 108510356 1 + C A UCEC 108510356 + 108510336 108510376 41 AATGTGTTTTATTTTCAGCCCTGCCAAGGTAACCCTGCTGG AATGTGTTTTATTTTCAGCCATGCCAAGGTAACCCTGCTGG Direct Loss 1 0.25792579763272 1 0.0495942831039429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108510356 chr9:108510356 nonsynonymous SNV 0.981 4 21 hm5C_associated_SNPs_1942 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:108510356-108510382
64251 chr11 66555709 66555709 1 + C T UCEC 66555709 + 66555689 66555729 41 CAGCTATTCTCAGGATATGACAGGGGTAACACCCTTCCAGA CAGCTATTCTCAGGATATGATAGGGGTAACACCCTTCCAGA Direct Loss 1 0.863851739549901 1 0.964502096176147 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66555709 chr11:66555709 nonsynonymous SNV 0.005 1 21 hm5C_associated_SNPs_1943 0 0 1 DDX24 POSTAR2 ENCODE chr11:66555670-66555732
64251 chrX 16804649 16804649 1 + C T UCEC 16804649 + 16804629 16804669 41 GAGGCAGCGCGGGGAAGAGGCGGCGGCGCCGAAGAGGCGAC GAGGCAGCGCGGGGAAGAGGTGGCGGCGCCGAAGAGGCGAC Direct Loss 1 0.944722186987317 1 0.706841945648193 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TXLNG ENSG00000086712 CDS Human protein_coding chrX:16804649 chrX:16804649 synonymous SNV . 0 21 hm5C_associated_SNPs_1945 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:16804620-16804680
64251 chr1 223943237 223943237 1 + C T UCEC 223943237 + 223943217 223943257 41 CTGGAGGAGGAGGATGAGGACGAGGAGGATGGGGAGAGCGG CTGGAGGAGGAGGATGAGGATGAGGAGGATGGGGAGAGCGG Direct Loss 1 0.84522241793174 1 0.485768556594849 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943237 chr1:223943237 synonymous SNV . 0 21 hm5C_associated_SNPs_1946 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:223943214-223943244
64251 chr11 64802321 64802321 1 + C T UCEC 64802321 + 64802301 64802341 41 TTGTCCTGGGGGCCGTAGGCCGGTTTGAAGCCTCAGTGATC TTGTCCTGGGGGCCGTAGGCTGGTTTGAAGCCTCAGTGATC Direct Loss 1 0.375020881211111 1 0.279670357704163 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802321 chr11:64802321 nonsynonymous SNV 0.888 4 21 hm5C_associated_SNPs_1948 0 0 1 YBX3 POSTAR2 ENCODE chr11:64802318-64802382
64251 chrX 48564940 48564940 1 + C T UCEC 48564940 + 48564920 48564960 41 TCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTC TCATAGACAACCTTGACGAGTGGCTGCCCCGCATCGCTTTC Direct Loss 1 0.40952265673232 1 0.144254237413406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564940 chrX:48564940 nonsynonymous SNV 0.045 4 21 hm5C_associated_SNPs_1949 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:48564939-48564964
64251 chr20 54970762 54970762 1 + C T UCEC 54970762 + 54970742 54970782 41 CACCCTCGGAGCAGCTCCTGCATCTCATCAAACTCGGTAGA CACCCTCGGAGCAGCTCCTGTATCTCATCAAACTCGGTAGA Direct Loss 1 0.177089017791093 1 0.256573796272278 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54970762 chr20:54970762 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_1950 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:54970719-54970762
64251 chr18 33780019 33780019 1 + C T UCEC 33780019 + 33779999 33780039 41 AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGG AGGTCAAGTCTGGGCGGTTGTACCCTGTGAGCACGCCTGGG Direct Loss 1 0.668507428149257 1 0.0671377182006836 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780019 chr18:33780019 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_1951 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr11 119142558 119142558 1 + C T UCEC 119142558 + 119142538 119142578 41 TCGGATTACTAAAGCAGATGCTGCGGAATTTTGGAGAAAAG TCGGATTACTAAAGCAGATGTTGCGGAATTTTGGAGAAAAG Direct Loss 1 0.295084774232939 1 0.169171035289764 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CBL ENSG00000110395 CDS Human protein_coding chr11:119142558 chr11:119142558 nonsynonymous SNV 0.991 5 21 hm5C_associated_SNPs_1952 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119142554-119142591
64251 chr6 44219833 44219833 1 + C T UCEC 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACCGAGCCCATTGACGAGTATTGTGTGCAGCAGCTCAAGGA Direct Loss 1 0.531727207113399 1 0.0400072336196899 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219833 synonymous SNV . 0 21 hm5C_associated_SNPs_1953 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr20 62366054 62366054 1 + C T UCEC 62366054 + 62366034 62366074 41 TGCCCTCTGTCCGTCTCTTGCAGTGGTGGGGTCAGATGCTG TGCCCTCTGTCCGTCTCTTGTAGTGGTGGGGTCAGATGCTG Direct Loss 1 0.471510163850921 1 0.300929814577103 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZGPAT ENSG00000197114 CDS Human protein_coding chr20:62366054 chr20:62366054 nonsynonymous SNV 0.746 0 21 hm5C_associated_SNPs_1954 0 0 4 BUD13 POSTAR2 ENCODE chr20:62366043-62366127
64251 chr6 32942278 32942278 1 + C T UCEC 32942278 + 32942258 32942298 41 GCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG GCAGGGTTGCTGGGGCTGGGTCCAGAAGCAGCAGCACCAGG Direct Loss 1 0.521776220699295 1 0.377625942230225 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32942278 chr6:32942278 synonymous SNV . 0 21 hm5C_associated_SNPs_1955 0 0 34 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:32942239-32942282
64251 chr13 103297358 103297358 1 + C T UCEC 103297358 + 103297338 103297378 41 AGAACTGGGTCCAAACACTGCGGTATCATTCAATGTTTTAG AGAACTGGGTCCAAACACTGTGGTATCATTCAATGTTTTAG Direct Loss 1 0.40161604329149 1 0.0862019956111908 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103297358 chr13:103297358 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_1956 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:103297333-103297370
64251 chr16 89620301 89620301 1 + C T UCEC 89620301 + 89620281 89620321 41 GCCCATCTCCTTCCCTGAGGCGCAGGAGGGCCTCATGGGCA GCCCATCTCCTTCCCTGAGGTGCAGGAGGGCCTCATGGGCA Direct Loss 1 0.666860257671686 1 0.520967304706573 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89620301 chr16:89620301 nonsynonymous SNV 0.321 1 21 hm5C_associated_SNPs_1958 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:89620301-89620302
64251 chr1 45242430 45242430 1 + C A UCEC 45242430 + 45242410 45242450 41 AGGTTGGACGTGGGGAATTTCTCCTGGGGCTCAGAGTGTGA AGGTTGGACGTGGGGAATTTATCCTGGGGCTCAGAGTGTGA Direct Loss 1 0.813433093760535 1 0.121393799781799 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45242430 chr1:45242430 nonsynonymous SNV 0.972 2 21 hm5C_associated_SNPs_1960 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:45242344-45242447
64251 chr6 31727628 31727628 1 + C T UCEC 31727628 + 31727608 31727648 41 CACGAGCAGCTGTCTTAACCCGAGTATTGGACCTTGCCTCC CACGAGCAGCTGTCTTAACCTGAGTATTGGACCTTGCCTCC Direct Loss 1 0.701755270593946 1 0.591938555240631 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31727628 chr6:31727628 stopgain 0.978 0 21 hm5C_associated_SNPs_1961 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:31727622-31727634
64251 chr14 53184802 53184802 1 + C G UCEC 53184802 + 53184782 53184822 41 TCTTTTGTCATTCTTAGGTACGGGAAAAACACTCTTGGCAC TCTTTTGTCATTCTTAGGTAGGGGAAAAACACTCTTGGCAC Direct Loss 1 0.870647459815494 1 0.948576092720032 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53184802 chr14:53184802 nonsynonymous SNV 0.763 5 21 hm5C_associated_SNPs_1964 0 0 3 DDX24 POSTAR2 ENCODE chr14:53184798-53184853
64251 chr1 155258172 155258172 1 + C T UCEC 155258172 + 155258152 155258192 41 CTCAGGGCTCCTGGCCAAACCTCCAAGGACAGCCCAGCCCC CTCAGGGCTCCTGGCCAAACTTCCAAGGACAGCCCAGCCCC Direct Loss 1 0.900383716830318 1 0.919657707214355 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout HCN3 ENSG00000143630 CDS Human protein_coding chr1:155258172 chr1:155258172 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_1967 0 0 1 DDX59 POSTAR2 ENCODE chr1:155258139-155258181
64251 chr9 134382806 134382806 1 + C T UCEC 134382806 + 134382786 134382826 41 GCGCCTGCTGCCAGCACTCGCGGGGGCCTTGTCGGTCCCCA GCGCCTGCTGCCAGCACTCGTGGGGGCCTTGTCGGTCCCCA Direct Loss 1 0.913635332141408 1 0.960180044174194 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control POMT1 ENSG00000130714 CDS Human protein_coding chr9:134382806 chr9:134382806 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_1968 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:134382795-134382822
64251 chr5 176710791 176710791 1 + C T UCEC 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACTGAATCATTGATGCTGGTCCC Direct Loss 1 0.0822708852093169 1 0.386491060256958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710791 stopgain 0.996 1 21 hm5C_associated_SNPs_1969 2 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr5:176710780-176710800
64251 chr10 81036966 81036966 1 + C T UCEC 81036966 + 81036946 81036986 41 TCCTCCTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCG TCCTCCTGGTGCGAAGAGCTTGGCCGCCTGCTGCTGCTCCG Direct Loss 1 0.540927286734297 1 0.200916588306427 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81036966 chr10:81036966 synonymous SNV . 0 21 hm5C_associated_SNPs_1970 0 0 3 DDX24 POSTAR2 ENCODE chr10:81036937-81037031
64251 chr5 68425373 68425373 1 + C T UCEC 68425373 + 68425353 68425393 41 CTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACA CTGGCCTAAGTACTGGATTTTATGATGTTCTGGCTATGACA Direct Loss 1 0.551078019201587 1 0.332730650901794 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68425373 chr5:68425373 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_1973 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68425346-68425374
64251 chr10 60145389 60145389 1 + C T UCEC 60145389 + 60145369 60145409 41 TGTGCACCGGCTGTGGAAGTCGACTGCGCTCCCCCTTCAGG TGTGCACCGGCTGTGGAAGTTGACTGCGCTCCCCCTTCAGG Direct Loss 1 0.761211148199361 1 0.304894208908081 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TFAM ENSG00000108064 CDS Human protein_coding chr10:60145389 chr10:60145389 stopgain 0.008 0 21 hm5C_associated_SNPs_1974 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:60145383-60145401
64251 chr1 109801322 109801322 1 + C T UCEC 109801322 + 109801302 109801342 41 GTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCT GTGGGCCAGCCGCCAGGGCCTGGGGGCGGGCCGCCCTTCCT Direct Loss 1 0.796733130681755 1 0.884688973426819 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801322 chr1:109801322 synonymous SNV . 0 21 hm5C_associated_SNPs_1980 0 0 3 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr4 1729555 1729555 1 + C T UCEC 1729555 + 1729535 1729575 41 TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCT TTTGGGAGTGGCAGCTCCAGTGAGTCTGGCCCAGGTGCCCT Direct Loss 1 0.700717960711837 1 0.631246209144592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729555 chr4:1729555 synonymous SNV . 0 21 hm5C_associated_SNPs_1981 0 0 6 EIF3D POSTAR2 ENCODE chr4:1729504-1729581
64251 chr1 180145092 180145092 1 + C T UCEC 180145092 + 180145072 180145112 41 GTGCTGACGTGCAGACACTGCGGGAGAGGCTCATTGACGCC GTGCTGACGTGCAGACACTGTGGGAGAGGCTCATTGACGCC Direct Loss 1 0.923551285280142 1 0.80587637424469 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180145092 chr1:180145092 nonsynonymous SNV 0.715 4 21 hm5C_associated_SNPs_1982 0 0 3 BUD13 POSTAR2 ENCODE chr1:180145072-180145123
64251 chr2 118579441 118579441 1 + C T UCEC 118579441 + 118579421 118579461 41 CCATATATCATTTTTAGGAACAGGAGTCCTTATTCTCTCAC CCATATATCATTTTTAGGAATAGGAGTCCTTATTCTCTCAC Direct Loss 1 0.840630719679348 1 0.536656677722931 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579441 chr2:118579441 nonsynonymous SNV 0.973 2 21 hm5C_associated_SNPs_1983 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:118579440-118579460
64251 chr2 75104440 75104440 1 + C T UCEC 75104440 + 75104420 75104460 41 GAGACCAAAGACATCTCAGACATTGAAGGGTGAGCTTCTGG GAGACCAAAGACATCTCAGATATTGAAGGGTGAGCTTCTGG Direct Loss 1 0.104017271375157 1 0.12786990404129 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HK2 ENSG00000159399 CDS Human protein_coding chr2:75104440 chr2:75104440 synonymous SNV . 0 21 hm5C_associated_SNPs_1984 0 0 8 BUD13 POSTAR2 ENCODE chr2:75104431-75104473
64251 chr1 109643194 109643194 1 + C A UCEC 109643194 + 109643174 109643214 41 ATCAGATAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTA ATCAGATAGACGAGGCCGGGATTGTCCCCGGCCACTGATTA Direct Loss 1 0.288158437283561 1 0.0671777129173279 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643194 chr1:109643194 . . 0 21 hm5C_associated_SNPs_1985 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr19 45649031 45649031 1 + C T UCEC 45649031 + 45649011 45649051 41 ACAAGGTGTTTGTGGTGACCCGGGTGGAGAGCCCGCCCGAG ACAAGGTGTTTGTGGTGACCTGGGTGGAGAGCCCGCCCGAG Direct Loss 1 0.867743488636147 1 0.913634181022644 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control PPP1R37 ENSG00000104866 CDS Human protein_coding chr19:45649031 chr19:45649031 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_1986 0 0 2 RBM15 POSTAR2 ENCODE chr19:45649012-45649061
64251 chr12 57919787 57919787 1 + C T UCEC 57919787 + 57919767 57919807 41 GCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCA GCACTTTACAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCA Direct Loss 1 0.384265137637889 1 0.705202519893646 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919787 chr12:57919787 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_1987 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr2 234354284 234354284 1 + C A UCEC 234354284 + 234354264 234354304 41 CTTAGTGTCAGCTGGGAGTGCTGCCGCTCGGCACAGGGAAC CTTAGTGTCAGCTGGGAGTGATGCCGCTCGGCACAGGGAAC Direct Loss 1 0.280320125363012 1 0.203948587179184 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKD ENSG00000077044 CDS Human protein_coding chr2:234354284 chr2:234354284 nonsynonymous SNV 0.843 3 21 hm5C_associated_SNPs_1989 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:234354266-234354291
64251 chr21 45107407 45107407 1 + C A UCEC 45107407 + 45107387 45107427 41 GTCTTTTTAGGAAGCAGAGTCTTTTGTGTAGAGGAAGAGGA GTCTTTTTAGGAAGCAGAGTATTTTGTGTAGAGGAAGAGGA Direct Loss 1 0.039834962514755 1 0.0986772775650024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107407 chr21:45107407 synonymous SNV . 0 21 hm5C_associated_SNPs_1991 0 0 19 CSTF2 POSTAR2 GSE40859,GSM1003588 chr21:45107399-45107420
64251 chr20 3888598 3888598 1 + C T UCEC 3888598 + 3888578 3888618 41 CCATGGTTTGGACTGGATATCGGTGGAACTCTGGTCAAGCT CCATGGTTTGGACTGGATATTGGTGGAACTCTGGTCAAGCT Direct Loss 1 0.635940557991475 1 0.56954562664032 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888598 chr20:3888598 synonymous SNV . 0 21 hm5C_associated_SNPs_1992 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:3888579-3888600
64251 chr11 58379202 58379202 1 + C A UCEC 58379202 + 58379182 58379222 41 AATTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCA AATTAGAGAGGATGAGGAACATCCAAGGAAGTGAGTAGGCA Direct Loss 1 0.772682042389263 1 0.729893684387207 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379202 chr11:58379202 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_1996 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr16 70349955 70349955 1 + C T UCEC 70349955 + 70349935 70349975 41 ACCAAGTGGAAGTCCTGCAGCGGGATCCAAACTCCCCTCTG ACCAAGTGGAAGTCCTGCAGTGGGATCCAAACTCCCCTCTG Direct Loss 1 0.95315043122033 1 0.942500948905945 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control DDX19B ENSG00000157349;ENSG00000260537 CDS Human other chr16:70349955 chr16:70349955 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_1997 0 0 2 GRWD1 POSTAR2 ENCODE chr16:70349937-70349985
64251 chrX 106046129 106046129 1 + C T UCEC 106046129 + 106046109 106046149 41 TTCTGAAAAATGCGCTGAAGCTGTGGCTGATGGAAAGGTCC TTCTGAAAAATGCGCTGAAGTTGTGGCTGATGGAAAGGTCC Direct Loss 1 0.558087008378377 1 0.112275183200836 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TBC1D8B ENSG00000133138 CDS Human protein_coding chrX:106046129 chrX:106046129 synonymous SNV . 0 21 hm5C_associated_SNPs_2000 0 0 1 PPIG POSTAR2 ENCODE chrX:106046007-106046136
64251 chr13 114292034 114292034 1 + C A UCEC 114292034 + 114292014 114292054 41 TATCCGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGCG TATCCGGAAGCTTCTACAGCAGTCTGTCCTGTGGAACTGCG Direct Loss 1 0.225522002091357 1 0.0241870582103729 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292034 chr13:114292034 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_2003 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114291991-114292035
64251 chr1 180010799 180010799 1 + C A UCEC 180010799 + 180010779 180010819 41 AACCCCTTTTATTTAAAGGTCCATGCAGAATCATTACAGCA AACCCCTTTTATTTAAAGGTACATGCAGAATCATTACAGCA Direct Loss 1 0.0168897378231422 1 0.0359240472316742 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180010799 chr1:180010799 synonymous SNV . 0 21 hm5C_associated_SNPs_2004 0 0 4 DDX24 POSTAR2 ENCODE chr1:180010794-180010895
64251 chr1 25679441 25679441 1 + C A UCEC 25679441 + 25679421 25679461 41 TGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCT TGATTGCATCTATGTGGATTATTTTTGGAGGTTATGTTGCT Direct Loss 1 0.0927403678942386 1 0.0175353288650513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25679441 chr1:25679441 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_2007 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25679370-25679462
64251 chr3 124456785 124456785 1 + C T UCEC 124456785 + 124456765 124456805 41 GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCC GCACCCAAAGAACTCAGCTTTGGTGCACGTGCAGAGCTGCC Direct Loss 1 0.387841753293366 1 0.695327401161194 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UMPS ENSG00000114491 CDS Human protein_coding chr3:124456785 chr3:124456785 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_2008 0 0 8 RTCB POSTAR2 GSE38201,GSM936508 chr3:124456770-124456796
64251 chr11 34129866 34129866 1 + C T UCEC 34129866 + 34129846 34129886 41 TCTTTGTTGTAGTTGGGGATCGAGGAAAAGATCAGGTATGG TCTTTGTTGTAGTTGGGGATTGAGGAAAAGATCAGGTATGG Direct Loss 1 0.649346877801879 1 0.608611404895782 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129866 chr11:34129866 stopgain 0.950 1 21 hm5C_associated_SNPs_2009 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34129801-34129889
64251 chr10 102762412 102762412 1 + C T UCEC 102762412 + 102762392 102762432 41 ATCTCAGGCCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCG ATCTCAGGCCGGCCCTGTCCTGGGGGGCCAGCTCCTCCCCG Direct Loss 1 0.950004321491415 1 0.963134229183197 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762412 chr10:102762412 synonymous SNV . 0 21 hm5C_associated_SNPs_2010 0 0 5 DDX24 POSTAR2 ENCODE chr10:102762228-102762472
64251 chr17 47119679 47119679 1 + C T UCEC 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCGAGAATTGTTGCAGGGCTGAGCAGGAAATAATGAAGAA Direct Loss 1 0.350009570899025 1 0.275057077407837 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119679 synonymous SNV . 0 21 hm5C_associated_SNPs_2012 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr3 126736355 126736355 1 + C T UCEC 126736355 + 126736335 126736375 41 GCCCACCAGAGCTGGGGGAGCGGCCGGATGAGCTGGGCTTC GCCCACCAGAGCTGGGGGAGTGGCCGGATGAGCTGGGCTTC Direct Loss 1 0.383165128300217 1 0.84181147813797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126736355 chr3:126736355 nonsynonymous SNV 0.865 3 21 hm5C_associated_SNPs_2013 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126736354-126736372
64251 chr7 77227168 77227168 1 + C A UCEC 77227168 + 77227148 77227188 41 TCTTTATTTAGGAGGATGAACAAGCAAGAACAGACTACTTC TCTTTATTTAGGAGGATGAAAAAGCAAGAACAGACTACTTC Direct Loss 1 0.382104601068583 1 0.44337061047554 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77227168 chr7:77227168 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_2014 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:77227148-77227169
64251 chr7 72397355 72397355 1 + C T UCEC 72397355 + 72397335 72397375 41 TGTAGACCAGAGCAGATAATCAGCTCAACACTGTCCTCACC TGTAGACCAGAGCAGATAATTAGCTCAACACTGTCCTCACC Direct Loss 1 0.393359245667739 1 0.715277791023254 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POM121 ENSG00000196313 CDS Human protein_coding chr7:72397355 chr7:72397355 synonymous SNV . 0 21 hm5C_associated_SNPs_2017 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:72397331-72397355
64251 chr12 132239012 132239012 1 + C T UCEC 132239012 + 132238992 132239032 41 GCCAGGAACGGCCTGAAGTTCGAGACCAGTGTTCGTGCCAA GCCAGGAACGGCCTGAAGTTTGAGACCAGTGTTCGTGCCAA Direct Loss 1 0.891614034031744 1 0.862968683242798 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132239012 chr12:132239012 synonymous SNV . 0 21 hm5C_associated_SNPs_2018 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:132238986-132239018
64251 chr10 43292423 43292423 1 + C T UCEC 43292423 + 43292403 43292443 41 AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC AAAGCAGCTCTCCCCACTTTTGATTCTGGGCATTGCACAGC Direct Loss 1 0.248997374649037 1 0.0829568803310394 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292423 chr10:43292423 synonymous SNV . 0 21 hm5C_associated_SNPs_2019 0 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr10:43292406-43292434
64251 chr19 34959978 34959978 1 + C T UCEC 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACGTTCTCATAGTTGATTTAGATGAAGAAGATTCTTCAA Direct Loss 1 0.469602967670884 1 0.166555792093277 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959978 nonsynonymous SNV 0.993 1 21 hm5C_associated_SNPs_2020 0 0 1 TRA2A POSTAR2 ENCODE chr19:34959965-34960066
64251 chr11 94800848 94800848 1 + C A UCEC 94800848 + 94800828 94800868 41 CCGATCTCGCTATAGGGGTTCTCGCTATAGCCGGTCTCCCT CCGATCTCGCTATAGGGGTTATCGCTATAGCCGGTCTCCCT Direct Loss 1 0.227886013654788 1 0.0538071990013123 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SRSF8 ENSG00000271885 CDS Human other chr11:94800848 chr11:94800848 unknown 0.001 0 21 hm5C_associated_SNPs_2021 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:94800807-94800882
64251 chr18 33289684 33289684 1 + C T UCEC 33289684 + 33289664 33289704 41 TTAGAGACTGCAATGGAAGTCGGTCCCAGCAGTGGCTTCTT TTAGAGACTGCAATGGAAGTTGGTCCCAGCAGTGGCTTCTT Direct Loss 1 0.420434711988622 1 0.529172837734222 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33289684 chr18:33289684 nonsynonymous SNV 0.993 2 21 hm5C_associated_SNPs_2022 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:33289662-33289706
64251 chr1 173819569 173819569 1 + C T UCEC 173819569 + 173819549 173819589 41 TTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCT TTAATCAGACTAATGGAGACTCAAGAGGAAGATGTGGTCCT Direct Loss 1 0.177048640969287 1 0.577068746089935 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DARS2 ENSG00000117593 CDS Human protein_coding chr1:173819569 chr1:173819569 synonymous SNV . 0 21 hm5C_associated_SNPs_2023 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173819528-173819588
64251 chr2 136537910 136537910 1 + C T UCEC 136537910 + 136537890 136537930 41 GACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTG GACTTCAGTGAGAGTAACATTGTCAGAACCCCCAAACCCTG Direct Loss 1 0.811578465277596 1 0.435646772384644 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136537910 chr2:136537910 nonsynonymous SNV 0.037 0 21 hm5C_associated_SNPs_2024 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:136537895-136537931
64251 chr19 49464798 49464798 1 + C A UCEC 49464798 + 49464778 49464818 41 CCTGTCTCCAGGACGGCCTCCTCTCCTACTTTGGGACGCCC CCTGTCTCCAGGACGGCCTCATCTCCTACTTTGGGACGCCC Direct Loss 1 0.153533493499201 1 0.110549628734589 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAX ENSG00000087088 CDS Human protein_coding chr19:49464798 chr19:49464798 nonsynonymous SNV 0.922 1 21 hm5C_associated_SNPs_2025 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr20 61595023 61595023 1 + C T UCEC 61595023 + 61595003 61595043 41 TTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGG TTCTTCGAGGAGACCTTCCCTGACGCCAAGGTGAGTCGGGG Direct Loss 1 0.493413828706717 1 0.205996721982956 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61595023 chr20:61595023 synonymous SNV . 0 21 hm5C_associated_SNPs_2027 0 0 5 GRWD1 POSTAR2 ENCODE chr20:61595016-61595033
64251 chr17 27049885 27049885 1 + C T UCEC 27049885 + 27049865 27049905 41 GCTGTGAAGAAGCTGTATGACATTGATGTGGCCAAGGTCAA GCTGTGAAGAAGCTGTATGATATTGATGTGGCCAAGGTCAA Direct Loss 1 0.337529329336892 1 0.0435357987880707 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27049885 chr17:27049885 synonymous SNV . 0 21 hm5C_associated_SNPs_2028 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr17:27049841-27049900
64251 chr3 10320677 10320677 1 + C T UCEC 10320677 + 10320657 10320697 41 CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC CCCTCACCTTGGCTGCCTTGTGTGAGAACACCAGTCGCCTC Direct Loss 1 0.762300704089034 1 0.713920950889587 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320677 chr3:10320677 nonsynonymous SNV 0.710 3 21 hm5C_associated_SNPs_2029 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr21 45560184 45560184 1 + C T UCEC 45560184 + 45560164 45560204 41 AGGTGAATAAAGAAGTGGAGCGTGTCCTGAAGGAGTTCCAC AGGTGAATAAAGAAGTGGAGTGTGTCCTGAAGGAGTTCCAC Direct Loss 1 0.271197545380662 1 0.0603040158748627 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560184 chr21:45560184 nonsynonymous SNV 0.028 4 21 hm5C_associated_SNPs_2031 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45560141-45560202
64251 chr22 43558925 43558925 1 + C T UCEC 43558925 + 43558905 43558945 41 TACCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTG TACCTGGCCTGGCTGGCCTTTACGACCACACTCAACTACTG Direct Loss 1 0.856927502009179 1 0.539295554161072 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558925 chr22:43558925 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_2032 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr1 40724018 40724018 1 + C A UCEC 40724018 + 40723998 40724038 41 ATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATCT ATCTTCGGGGCCGTGCTGCTATTTTCCTGGACAGTGTATCT Direct Loss 1 0.216059184512089 1 0.0158885717391968 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40724018 chr1:40724018 synonymous SNV . 0 21 hm5C_associated_SNPs_2033 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:40723996-40724026
64251 chr4 184205512 184205512 1 + C A UCEC 184205512 + 184205492 184205532 41 AGTGCGCTCACAGACCTTTTCTCCAGGAGAGCGGAACCAGT AGTGCGCTCACAGACCTTTTATCCAGGAGAGCGGAACCAGT Direct Loss 1 0.806322326031107 1 0.81705629825592 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184205512 chr4:184205512 nonsynonymous SNV 0.555 4 21 hm5C_associated_SNPs_2034 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:184205494-184205525
64251 chr8 124811871 124811871 1 + C T UCEC 124811871 + 124811851 124811891 41 TGTCCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT TGTCCAAAGGTACAAGACTTTGAAAACTGCCAGATATATTT Direct Loss 1 0.719948086218734 1 0.546759903430939 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124811871 chr8:124811871 stopgain 0.998 1 21 hm5C_associated_SNPs_2036 0 0 3 DDX24 POSTAR2 ENCODE chr8:124811826-124811873
64251 chr6 144747498 144747498 1 + C T UCEC 144747498 + 144747478 144747518 41 AGATCCTGCTCAGCTGGGTGCGTCAGACCACCAGGCCCTAC AGATCCTGCTCAGCTGGGTGTGTCAGACCACCAGGCCCTAC Direct Loss 1 0.295370591725369 1 0.0854175984859467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144747498 chr6:144747498 nonsynonymous SNV 0.977 5 21 hm5C_associated_SNPs_2037 0 0 7 EIF3H POSTAR2 ENCODE chr6:144747461-144747527
64251 chr2 27277595 27277595 1 + C T UCEC 27277595 + 27277575 27277615 41 TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT TCACTTCCTGCCATGGGCTTTGAGAAGATCGAGAGCCCCGT Direct Loss 1 0.665816878848091 1 0.801217436790466 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27277595 chr2:27277595 stopgain 0.999 0 21 hm5C_associated_SNPs_2038 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27277576-27277601
64251 chr9 100773653 100773653 1 + C T UCEC 100773653 + 100773633 100773673 41 GTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT GTAGAAGGGGATGAGGACGATGATGAAGTCAGTGAGGAGGT Direct Loss 1 0.449151308051845 1 0.4148850440979 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773653 chr9:100773653 synonymous SNV . 0 21 hm5C_associated_SNPs_2039 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr1 27631567 27631567 1 + C T UCEC 27631567 + 27631547 27631587 41 AAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGA AAGGAGACCACCAACCTGGTTCGTGTGCTCCAAGGGGATGA Direct Loss 1 0.149097139567042 1 0.0601920187473297 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27631567 chr1:27631567 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_2040 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr1:27631560-27631580
64251 chr11 10783524 10783524 1 + C A UCEC 10783524 + 10783504 10783544 41 TTAAAAATGGTGTCCAGCTTCTTTCCAGAGCCTATACTATT TTAAAAATGGTGTCCAGCTTATTTCCAGAGCCTATACTATT Direct Loss 1 0.041329570971555 1 0.111215144395828 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CTR9 ENSG00000198730 CDS Human protein_coding chr11:10783524 chr11:10783524 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_2041 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10783510-10783545
64251 chr11 65402834 65402834 1 + C T UCEC 65402834 + 65402814 65402854 41 CAACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATG CAACACGCCCTCCCTGCTGGTGCTGCGCCATGTCCTGGATG Direct Loss 1 0.109484807635814 1 0.0556133091449738 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402834 chr11:65402834 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_2042 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 120099596 120099596 1 + C T UCEC 120099596 + 120099576 120099616 41 GGTGTGGACAGTTCTGTGTTCGAGGCTCTGCCCAAGGCCTC GGTGTGGACAGTTCTGTGTTTGAGGCTCTGCCCAAGGCCTC Direct Loss 1 0.829919666707777 1 0.754854440689087 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OAF ENSG00000184232 CDS Human protein_coding chr11:120099596 chr11:120099596 synonymous SNV . 0 21 hm5C_associated_SNPs_2043 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:120099574-120099597
64251 chr19 55899674 55899674 1 + C T UCEC 55899674 + 55899654 55899694 41 CTGTGATGGTGAAGAGGAAGCGGACCCGCCCCACCAAGAGC CTGTGATGGTGAAGAGGAAGTGGACCCGCCCCACCAAGAGC Direct Loss 1 0.625258159527202 1 0.514826714992523 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899674 chr19:55899674 nonsynonymous SNV 0.937 1 21 hm5C_associated_SNPs_2046 0 0 40 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:55899600-55899700
64251 chr11 65348823 65348823 1 + C T UCEC 65348823 + 65348803 65348843 41 CCCTGAGGCCCCAAGGCCCCCGGAAACCTCACCAGAGATGA CCCTGAGGCCCCAAGGCCCCTGGAAACCTCACCAGAGATGA Direct Loss 1 0.63668109586444 1 0.496847152709961 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65348823 chr11:65348823 nonsynonymous SNV 0.560 0 21 hm5C_associated_SNPs_2048 0 0 2 FMR1 POSTAR2 ENCODE chr11:65348799-65348823
64251 chr19 52206224 52206224 1 + C G UCEC 52206224 + 52206204 52206244 41 CTCAAATGGGCCAAGGGCCCCGGGCTTGGAAGGGCAGGTGG CTCAAATGGGCCAAGGGCCCGGGGCTTGGAAGGGCAGGTGG Direct Loss 1 0.467304617985689 1 0.754998862743378 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPACA6 ENSG00000182310 ncRNA_exonic Human protein_coding chr19:52206224 chr19:52206224 . . 0 21 hm5C_associated_SNPs_2049 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:52206220-52206240
64251 chr19 45375183 45375183 1 + C A UCEC 45375183 + 45375163 45375203 41 ACGACAGTGGCCCTCTGCATCTCCAAAGAGGGCCGCCCACC ACGACAGTGGCCCTCTGCATATCCAAAGAGGGCCGCCCACC Direct Loss 1 0.849626936294797 1 0.940126776695251 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375183 chr19:45375183 synonymous SNV . 0 21 hm5C_associated_SNPs_2050 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45375165-45375190
64251 chr12 102517803 102517803 1 + C A UCEC 102517803 + 102517783 102517823 41 GGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGGTTG GGCATTGCAGCTTTCTATGGAGGAGAACAACAAACAGGTTG Direct Loss 1 0.697551548745943 1 0.78949761390686 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102517803 chr12:102517803 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_2051 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102517707-102517816
64251 chrX 47426451 47426451 1 + C T UCEC 47426451 + 47426431 47426471 41 CAGCCCAGCCAGCGTGTCCTCGGGGAGGAAGTCCCCACATT CAGCCCAGCCAGCGTGTCCTTGGGGAGGAAGTCCCCACATT Direct Loss 1 0.958557565186299 1 0.925739288330078 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ARAF ENSG00000078061 CDS Human protein_coding chrX:47426451 chrX:47426451 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_2053 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chrX:47426422-47426458
64251 chr15 69747822 69747822 1 + C T UCEC 69747822 + 69747802 69747842 41 TCCGAGGAGTCTGATGATGACATGGGCTTTGGTCTTTTTGA TCCGAGGAGTCTGATGATGATATGGGCTTTGGTCTTTTTGA Direct Loss 1 0.450414246215609 1 0.591024935245514 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747822 chr15:69747822 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_2054 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704217 chr15:69747760-69747860
64251 chr11 66411334 66411334 1 + C A UCEC 66411334 + 66411314 66411354 41 TCGATCCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT TCGATCCCTACGATAGACACATGTTGCCGACCTCAGGAGCT Direct Loss 1 0.138243100055919 1 0.0365733206272125 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411334 chr11:66411334 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_2055 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:66411280-66411340
64251 chr1 171501758 171501758 1 + C T UCEC 171501758 + 171501738 171501778 41 AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT AGGAAATTAGGGAAAGGGAGTGAGAAAAAGAACGGGAGCGT Direct Loss 1 0.610609928190328 1 0.657288670539856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171501758 chr1:171501758 stopgain 0.921 0 21 hm5C_associated_SNPs_2056 0 0 22 TARDBP POSTAR2 DRA001158,DRS012387 chr1:171501730-171501771
64251 chr1 145115809 145115809 1 + C T UCEC 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACTTGAACATGTATTCCACTTATGCCAAACTT Direct Loss 1 0.0490797356652572 1 0.06900355219841 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115809 . . 0 21 hm5C_associated_SNPs_2058 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:145115800-145115821
64251 chr13 111111172 111111172 1 + C T UCEC 111111172 + 111111152 111111192 41 CGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAGG CGAAGCTATCAAAGGTCTTCTGGGACTGCCAGGACCCAAGG Direct Loss 1 0.704592377595864 1 0.873873770236969 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111172 chr13:111111172 nonsynonymous SNV 0.040 4 21 hm5C_associated_SNPs_2059 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr16 70589097 70589097 1 + C T UCEC 70589097 + 70589077 70589117 41 GGAGGAGAGCTGGTCTATTTCGAGATGGATCCTGTATGTTA GGAGGAGAGCTGGTCTATTTTGAGATGGATCCTGTATGTTA Direct Loss 1 0.91022163774733 1 0.717660129070282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589097 chr16:70589097 synonymous SNV . 0 21 hm5C_associated_SNPs_2060 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr5 149751759 149751759 1 + C A UCEC 149751759 + 149751739 149751779 41 AGAGAGTAGTGAGGAGGGATCTGAAAGTGAGGAGGAGGCCC AGAGAGTAGTGAGGAGGGATATGAAAGTGAGGAGGAGGCCC Direct Loss 1 0.678311595795952 1 0.482751697301865 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751759 chr5:149751759 nonsynonymous SNV 0.385 3 21 hm5C_associated_SNPs_2061 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chrX 152959718 152959718 1 + C T UCEC 152959718 + 152959698 152959738 41 CATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG CATCGATCTCTCCATGGTGATTGATGTGAGTGGGGTGGGGG Direct Loss 1 0.323472637542459 1 0.0698421001434326 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959718 chrX:152959718 nonsynonymous SNV 0.995 3 21 hm5C_associated_SNPs_2063 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chr2 192141711 192141711 1 + C A UCEC 192141711 + 192141691 192141731 41 GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAA GAACCTCTCAATGAGGAGACATTCATCAACAACCTCAAGAA Direct Loss 1 0.387517886671305 1 0.0731813013553619 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141711 chr2:192141711 synonymous SNV . 0 21 hm5C_associated_SNPs_2065 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378375 chr2:192141700-192141720
64251 chr22 39918059 39918059 1 + C A UCEC 39918059 + 39918039 39918079 41 TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCAGATCAT TTCCCCTTTCCCCAGGGGTCATGTCCTCCACTCCAGATCAT Direct Loss 1 0.192897167470535 1 0.0542442798614502 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918059 chr22:39918059 nonsynonymous SNV 0.904 2 21 hm5C_associated_SNPs_2066 0 0 39 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:39917980-39918060
64251 chr20 30753183 30753183 1 + C T UCEC 30753183 + 30753163 30753203 41 CTTCTGGCTGCTAACGGGTACCATCGGCTTCTATGCAGCCT CTTCTGGCTGCTAACGGGTATCATCGGCTTCTATGCAGCCT Direct Loss 1 0.0410392448292804 1 0.29092064499855 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30753183 chr20:30753183 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_2068 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:30753151-30753184
64251 chr1 109643050 109643050 1 + C A UCEC 109643050 + 109643030 109643070 41 GGCCGACCCGAAATGAAAAGCTCTCCTCCTGCGAAGCCCCC GGCCGACCCGAAATGAAAAGATCTCCTCCTGCGAAGCCCCC Direct Loss 1 0.197252300379607 1 0.130846619606018 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643050 chr1:109643050 . . 0 21 hm5C_associated_SNPs_2069 0 0 52 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr19 34868408 34868408 1 + C T UCEC 34868408 + 34868388 34868428 41 CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGG CATCTTCGCCCCTGTGCCAGTGTGTCCGGAGCGGTGACTGG Direct Loss 1 0.235925858398115 1 0.542707622051239 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868408 chr19:34868408 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_2071 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr2 128184754 128184754 1 + C T UCEC 128184754 + 128184734 128184774 41 CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGATGAGT CCCCTCCTGGGTGCTGACAGTGGCCCACTGCATGGATGAGT Direct Loss 1 0.34937657678075 1 0.461286008358002 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128184754 chr2:128184754 nonsynonymous SNV 0.989 3 21 hm5C_associated_SNPs_2072 0 0 3 BUD13 POSTAR2 ENCODE chr2:128184700-128184754
64251 chr11 125513701 125513701 1 + C T UCEC 125513701 + 125513681 125513721 41 TTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTG TTTTAGGGGCAAAAAGGCCCTGAGTCACTTCAGGTGGTGTG Direct Loss 1 0.436413788052167 1 0.214854538440704 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513701 chr11:125513701 stopgain 0.996 0 21 hm5C_associated_SNPs_2074 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr15 89169857 89169857 1 + C T UCEC 89169857 + 89169837 89169877 41 TCCATTGTGAGCTACCATGGCAATGTCCTCTATGACAAGTA TCCATTGTGAGCTACCATGGTAATGTCCTCTATGACAAGTA Direct Loss 1 0.248767275774837 1 0.175181359052658 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89169857 chr15:89169857 synonymous SNV . 0 21 hm5C_associated_SNPs_2077 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr15:89169840-89169880
64251 chr1 39853302 39853302 1 + C T UCEC 39853302 + 39853282 39853322 41 AAGCTAAGATGTCTGAGTTGCGAGTCACTCTGGATCCAGTG AAGCTAAGATGTCTGAGTTGTGAGTCACTCTGGATCCAGTG Direct Loss 1 0.13261624037685 1 0.415232717990875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39853302 chr1:39853302 stopgain 0.930 0 21 hm5C_associated_SNPs_2078 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39853286-39853318
64251 chr1 230384969 230384969 1 + C T UCEC 230384969 + 230384949 230384989 41 ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCC ATTCAAGTGGGATTACATGATGCCTGAGCAGAGAAGGTCCC Direct Loss 1 0.524628445646226 1 0.144441783428192 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384969 chr1:230384969 nonsynonymous SNV 0.990 3 21 hm5C_associated_SNPs_2079 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chr8 104342108 104342108 1 + C T UCEC 104342108 + 104342088 104342128 41 CAAGAAACTTTGACAGAAATCCAAACCTCACCAGAAACATC CAAGAAACTTTGACAGAAATTCAAACCTCACCAGAAACATC Direct Loss 1 0.343981540955092 1 0.0700377821922302 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342108 chr8:104342108 synonymous SNV . 0 21 hm5C_associated_SNPs_2080 0 0 1 GRWD1 POSTAR2 ENCODE chr8:104342102-104342250
64251 chr6 168265414 168265414 1 + C T UCEC 168265414 + 168265394 168265434 41 AGTATTCACTCTATGAAGTGCATGTCAGCGGAGGTCAGTGT AGTATTCACTCTATGAAGTGTATGTCAGCGGAGGTCAGTGT Direct Loss 1 0.0922689928320436 1 0.0207819938659668 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168265414 chr6:168265414 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_2082 0 0 6 PPIG POSTAR2 ENCODE chr6:168265402-168265427
64251 chr17 4859438 4859438 1 + C T UCEC 4859438 + 4859418 4859458 41 GGTGACCGAATCGATCCAGGCGTGAGTGCCTCCTGACCCTG GGTGACCGAATCGATCCAGGTGTGAGTGCCTCCTGACCCTG Direct Loss 1 0.868638489702663 1 0.154826253652573 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859438 chr17:4859438 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_2083 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr2 54872430 54872430 1 + C T UCEC 54872430 + 54872410 54872450 41 GCTCCAAAGCCAAGCCCAGGCCCTGAGTCAGGAAGGGAAGA GCTCCAAAGCCAAGCCCAGGTCCTGAGTCAGGAAGGGAAGA Direct Loss 1 0.0915560221993155 1 0.102530270814896 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872430 chr2:54872430 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_2084 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr17 49247315 49247315 1 + C T UCEC 49247315 + 49247295 49247335 41 GAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGT GAGGTCTGGGAGGGGCTGAATGTGGTGAAGACAGGCCGAGT Direct Loss 1 0.617547385681838 1 0.679262340068817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247315 chr17:49247315 synonymous SNV . 0 21 hm5C_associated_SNPs_2086 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr1 164790815 164790815 1 + C T UCEC 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAGACAGGAGGATATAGTGATGGACTCGCAGCCAG Direct Loss 1 0.699468622895908 1 0.333459079265594 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790815 stopgain 1.000 0 21 hm5C_associated_SNPs_2088 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr11 44129604 44129604 1 + C T UCEC 44129604 + 44129584 44129624 41 ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCGTCTC ATCTATGCTCTGAAAAAGTATGTGGATGACTTTGGCGTCTC Direct Loss 1 0.528579737257496 1 0.571972012519836 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129604 chr11:44129604 synonymous SNV . 0 21 hm5C_associated_SNPs_2089 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:44129587-44129614
64251 chr6 151672255 151672255 1 + C A UCEC 151672255 + 151672235 151672275 41 TACCATTATTGAAGAAAGGTCTCCTTCTTGGATATCTGCTT TACCATTATTGAAGAAAGGTATCCTTCTTGGATATCTGCTT Direct Loss 1 0.147767877913347 1 0.118001699447632 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151672255 chr6:151672255 nonsynonymous SNV 0.699 3 21 hm5C_associated_SNPs_2090 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151672236-151672347
64251 chr19 50001175 50001175 1 + C T UCEC 50001175 + 50001155 50001195 41 GATCGGCCCCCGCTCCTAGGCGTGGTGACCAAGATGAAGAT GATCGGCCCCCGCTCCTAGGTGTGGTGACCAAGATGAAGAT Direct Loss 1 0.576858181691341 1 0.389453232288361 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS11 ENSG00000142534 CDS Human protein_coding chr19:50001175 chr19:50001175 nonsynonymous SNV 0.506 0 21 hm5C_associated_SNPs_2091 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50001160-50001220
64251 chr2 200824514 200824514 1 + C A UCEC 200824514 + 200824494 200824534 41 AGAAAAGGTTACTTCACTACCTGACAACCATAAAAATGCCC AGAAAAGGTTACTTCACTACATGACAACCATAAAAATGCCC Direct Loss 1 0.210432537614029 1 0.1236512362957 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824514 chr2:200824514 nonsynonymous SNV 0.993 2 21 hm5C_associated_SNPs_2092 0 0 2 EWSR1 POSTAR2 SRX029343 chr2:200824491-200824527
64251 chr7 6057450 6057450 1 + C T UCEC 6057450 + 6057430 6057470 41 TTGGTCTTTCCCCAGGATTACGGGGCGCTGAAAGACATCGT TTGGTCTTTCCCCAGGATTATGGGGCGCTGAAAGACATCGT Direct Loss 1 0.803870208446573 1 0.796651005744934 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057450 chr7:6057450 synonymous SNV . 0 21 hm5C_associated_SNPs_2093 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6057445-6057469
64251 chr11 5624638 5624638 1 + C T UCEC 5624638 + 5624618 5624658 41 CTGAGCATAGACTGTGGCCACAGCTTCTGCCAAGCCTGCAT CTGAGCATAGACTGTGGCCATAGCTTCTGCCAAGCCTGCAT Direct Loss 1 0.588080693569416 1 0.442867755889893 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIM6;TRIM6-TRIM34 ENSG00000121236;ENSG00000258588 CDS Human other chr11:5624638 chr11:5624638 synonymous SNV . 0 21 hm5C_associated_SNPs_2094 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:5624622-5624646
64251 chr17 38320059 38320059 1 + C A UCEC 38320059 + 38320039 38320079 41 CAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAA CAGAAGCAGATGCTCCAGTGATTGGCAGTCCTGAGAAGGAA Direct Loss 1 0.397752886313349 1 0.106875717639923 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320059 chr17:38320059 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_2095 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr4 71555124 71555124 1 + C T UCEC 71555124 + 71555104 71555144 41 TGACAGAGGTTAAGGATGAGCTGGAGCCATTGTTAGAGTTG TGACAGAGGTTAAGGATGAGTTGGAGCCATTGTTAGAGTTG Direct Loss 1 0.929282601696382 1 0.65177720785141 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UTP3 ENSG00000132467 CDS Human protein_coding chr4:71555124 chr4:71555124 synonymous SNV . 0 21 hm5C_associated_SNPs_2098 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:71555067-71555137
64251 chr5 134099691 134099691 1 + C T UCEC 134099691 + 134099671 134099711 41 GTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGATAGA GTAAACGTGGAGATGACAGATGGTCTAGAAGTAGAGATAGA Direct Loss 1 0.365616435256815 1 0.409069508314133 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099691 chr5:134099691 nonsynonymous SNV 0.990 4 21 hm5C_associated_SNPs_2101 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chrX 73044555 73044555 1 - G A UCS 73044555 - 73044535 73044575 41 GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAAT GTGAGATCCAGACCGAAAGTTACTTAATTCAGCTTGCGAAT Direct Loss 1 0.0796581935088207 1 0.0325771868228912 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044555 chrX:73044555 . . 0 21 hm5C_associated_SNPs_2102 0 0 65 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 2395011 2395011 1 + C G UCS 2395011 + 2394991 2395031 41 CGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACT CGGCGACGCGGACGAGCCCTGCTTCAGCGACCCCGAGGACT Direct Loss 1 0.0769799572226723 1 0.162194699048996 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395011 chr7:2395011 nonsynonymous SNV 0.982 3 21 hm5C_associated_SNPs_2105 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr3 127335929 127335929 1 + C T UCS 127335929 + 127335909 127335949 41 GGGCCCTGGTTCTGGCTGACCGAGGAGTGTGTCTCATTGAT GGGCCCTGGTTCTGGCTGACTGAGGAGTGTGTCTCATTGAT Direct Loss 1 0.71185381364921 1 0.67714923620224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127335929 chr3:127335929 stopgain 0.942 1 21 hm5C_associated_SNPs_2106 0 0 15 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127335890-127335930
64251 chr5 54641006 54641006 1 + C T LAML 54641006 + 54640986 54641026 41 CCAAAGGAGACCAGAAAGGGCGGAAAGGAGGAACAAAAGGT CCAAAGGAGACCAGAAAGGGTGGAAAGGAGGAACAAAAGGT Direct Loss 1 0.682458604871289 1 0.435689508914948 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54641006 chr5:54641006 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_2108 0 0 4 GRWD1 POSTAR2 ENCODE chr5:54640937-54641022
64251 chr8 22054839 22054839 1 + C T LAML 22054839 + 22054819 22054859 41 TTCTGTGGTTCTGAGAAGCCCGAGGTCATCACCTCCCAGTA TTCTGTGGTTCTGAGAAGCCTGAGGTCATCACCTCCCAGTA Direct Loss 1 0.736107453093115 1 0.682650566101074 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054839 chr8:22054839 synonymous SNV . 0 21 hm5C_associated_SNPs_2110 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chr17 38320064 38320064 1 + C T LAML 38320064 + 38320044 38320084 41 GCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGC GCAGATGCTCCAGTGCTTGGTAGTCCTGAGAAGGAAGAGGC Direct Loss 1 0.246011287403615 1 0.163858830928802 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320064 chr17:38320064 synonymous SNV . 0 21 hm5C_associated_SNPs_2111 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr17 46128919 46128919 1 + C T LAML 46128919 + 46128899 46128939 41 TGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTG TGCGAGAAAGCGAAACGGAGTAGGGATTCGGTGAAGATTTG Direct Loss 1 0.665461468443482 1 0.609165251255035 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128919 chr17:46128919 stopgain 1.000 0 21 hm5C_associated_SNPs_2112 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128900-46128920
64251 chr4 26407834 26407834 1 + C T LAML 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAGCGAGGGGATTAAACAGTACTTATTCTTCAT Direct Loss 1 0.33094474087806 1 0.231382727622986 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407834 stopgain 1.000 1 21 hm5C_associated_SNPs_2114 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:26407809-26407840
64251 chr1 879317 879317 1 + C T rs7523549 879299 + 879279 879319 41 TCTCTGCAGGTGGCCAGGCGCCTGGGCCGAGTTTTCTACGT TCTCTGCAGGTGGCCAGGCGCCTGGGCCGAGTTTTCTATGT < 41bp 1 0.536399868217293 1 0.481318861246109 experiment 0.927200263565414 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:879299 chr1:879317 synonymous SNV . 0 39 hm5C_associated_SNPs_2118 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:879300-879320
64251 chr1 879317 879317 1 + C T rs7523549 879305 + 879285 879325 41 CAGGTGGCCAGGCGCCTGGGCCGAGTTTTCTACGTGGCCAG CAGGTGGCCAGGCGCCTGGGCCGAGTTTTCTATGTGGCCAG < 41bp 1 0.538402312054196 1 0.10447034239769 experiment 0.923195375891608 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:879305 chr1:879317 synonymous SNV . 0 33 hm5C_associated_SNPs_2119 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:879300-879320
64251 chr1 879317 879317 1 + C T rs7523549 879306 + 879286 879326 41 AGGTGGCCAGGCGCCTGGGCCGAGTTTTCTACGTGGCCAGC AGGTGGCCAGGCGCCTGGGCCGAGTTTTCTATGTGGCCAGC < 41bp 1 0.724058155465399 1 0.15086030960083 experiment 0.551883689069202 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:879306 chr1:879317 synonymous SNV . 0 32 hm5C_associated_SNPs_2120 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:879300-879320
64251 chr1 949654 949654 1 + A G rs8997 949655 + 949635 949675 41 GCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCC GCAGCAGCACCTACGAGGTGCGGCTGACGCAGACCGTGGCC < 41bp 1 0.619918165253594 1 0.381407409906387 experiment 0.760163669492812 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ISG15 ENSG00000187608 CDS Human protein_coding chr1:949655 chr1:949654 synonymous SNV . 0 20 hm5C_associated_SNPs_2125 0 0 2 RPS3 POSTAR2 ENCODE chr1:949611-949663
64251 chr1 977027 977027 1 + G A rs563020089 977045 + 977025 977065 41 GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG GGAGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG < 41bp 1 0.104899824576402 1 0.444766014814377 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:977045 chr1:977027 synonymous SNV . 0 3 hm5C_associated_SNPs_2126 0 0 7 FMR1 POSTAR2 ENCODE chr1:977015-977054
64251 chr1 977028 977028 1 + G T rs138031468 977045 + 977025 977065 41 GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG GGGTCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG < 41bp 1 0.105624973364276 1 0.386937767267227 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:977045 chr1:977028 nonsynonymous SNV 0.003 1 4 hm5C_associated_SNPs_2127 2 0 7 FMR1 POSTAR2 ENCODE chr1:977015-977054
64251 chr1 978668 978668 1 + G A rs147346337 978683 + 978663 978703 41 GCGACGTGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG GCGACATGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG < 41bp 1 0.374486876527865 1 0.1955426633358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:978683 chr1:978668 synonymous SNV . 0 6 hm5C_associated_SNPs_2128 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:978637-978670
64251 chr1 979382 979382 1 + C T rs534519250 979380 + 979360 979400 41 GCAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGC GCAGACACAGATCGAGGAGGCCTGGGCAGGGCCGTGCGAGC < 41bp 1 0.222928394835252 1 0.493440419435501 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979380 chr1:979382 nonsynonymous SNV 0.761 0 23 hm5C_associated_SNPs_2129 0 0 3 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979382 979382 1 + C T rs534519250 979381 + 979361 979401 41 CAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCA CAGACACAGATCGAGGAGGCCTGGGCAGGGCCGTGCGAGCA < 41bp 1 0.650635629818767 1 0.419487595558167 experiment 0.698728740362467 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979381 chr1:979382 nonsynonymous SNV 0.761 0 22 hm5C_associated_SNPs_2130 0 0 3 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979382 979382 1 + C T rs534519250 979391 + 979371 979411 41 TCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG TCGAGGAGGCCTGGGCAGGGCCGTGCGAGCAGGGTAGGCCG < 41bp 1 0.244809544862663 1 0.442578196525574 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979391 chr1:979382 nonsynonymous SNV 0.761 0 12 hm5C_associated_SNPs_2131 0 0 3 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979382 979382 1 + C T rs534519250 979392 + 979372 979412 41 CGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG CGAGGAGGCCTGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG < 41bp 1 0.32418387671615 1 0.609713494777679 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979392 chr1:979382 nonsynonymous SNV 0.761 0 11 hm5C_associated_SNPs_2132 0 0 3 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979397 979397 1 + G A rs143324306 979380 + 979360 979400 41 GCAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGC GCAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCAAGC < 41bp 1 0.422180976332881 1 0.430829286575317 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979380 chr1:979397 nonsynonymous SNV 0.287 3 38 hm5C_associated_SNPs_2133 1 0 4 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979397 979397 1 + G A rs143324306 979381 + 979361 979401 41 CAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCA CAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCAAGCA < 41bp 1 0.388900179920644 1 0.229288667440414 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979381 chr1:979397 nonsynonymous SNV 0.287 3 37 hm5C_associated_SNPs_2134 1 0 4 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979397 979397 1 + G A rs143324306 979382 + 979362 979402 41 AGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAG AGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCAAGCAG < 41bp 1 0.63174657604807 1 0.773626565933228 experiment 0.736506847903861 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979382 chr1:979397 nonsynonymous SNV 0.287 3 36 hm5C_associated_SNPs_2135 1 0 4 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979397 979397 1 + G A rs143324306 979391 + 979371 979411 41 TCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG TCGAGGAGGCCCGGGCAGGGCCGTGCAAGCAGGGTAGGCCG < 41bp 1 0.274539377492124 1 0.40522426366806 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979391 chr1:979397 nonsynonymous SNV 0.287 3 27 hm5C_associated_SNPs_2136 1 0 4 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 979397 979397 1 + G A rs143324306 979392 + 979372 979412 41 CGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG CGAGGAGGCCCGGGCAGGGCCGTGCAAGCAGGGTAGGCCGG < 41bp 1 0.262290733664326 1 0.544510841369629 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979392 chr1:979397 nonsynonymous SNV 0.287 3 26 hm5C_associated_SNPs_2137 1 0 4 FXR2 POSTAR2 ENCODE chr1:979376-979402
64251 chr1 984257 984257 1 + C T rs200170414 984264 + 984244 984284 41 CAGTGCTTGGCGCCCCTGTGCCGGCCTTCGAGGGCCGCTCC CAGTGCTTGGCGCTCCTGTGCCGGCCTTCGAGGGCCGCTCC < 41bp 1 0.252973089649904 1 0.47593280673027 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984264 chr1:984257 synonymous SNV . 0 14 hm5C_associated_SNPs_2138 1 0 2 BUD13 POSTAR2 ENCODE chr1:984229-984279
64251 chr1 984272 984272 1 + C G rs368555478 984264 + 984244 984284 41 CAGTGCTTGGCGCCCCTGTGCCGGCCTTCGAGGGCCGCTCC CAGTGCTTGGCGCCCCTGTGCCGGCCTTGGAGGGCCGCTCC < 41bp 1 0.276294369418773 1 0.561966240406036 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984264 chr1:984272 nonsynonymous SNV 0.030 4 29 hm5C_associated_SNPs_2139 0 0 2 BUD13 POSTAR2 ENCODE chr1:984229-984279
64251 chr1 984280 984280 1 + G A rs183686622 984264 + 984244 984284 41 CAGTGCTTGGCGCCCCTGTGCCGGCCTTCGAGGGCCGCTCC CAGTGCTTGGCGCCCCTGTGCCGGCCTTCGAGGGCCACTCC < 41bp 1 0.237115583535867 1 0.46777668595314 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984264 chr1:984280 nonsynonymous SNV 0.080 0 37 hm5C_associated_SNPs_2140 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:984218-984305
64251 chr1 984280 984280 1 + G A rs183686622 984297 + 984277 984317 41 GCCGCTCCTTCCTGGCCTTCCCCACTCTCCGCGCCTACCAC GCCACTCCTTCCTGGCCTTCCCCACTCTCCGCGCCTACCAC < 41bp 1 0.105263416241006 1 0.169745862483978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984297 chr1:984280 nonsynonymous SNV 0.080 0 4 hm5C_associated_SNPs_2141 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:984218-984305
64251 chr1 984302 984302 1 + T C rs9442391 984297 + 984277 984317 41 GCCGCTCCTTCCTGGCCTTCCCCACTCTCCGCGCCTACCAC GCCGCTCCTTCCTGGCCTTCCCCACCCTCCGCGCCTACCAC < 41bp 1 0.0876106532658748 1 0.344931155443192 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984297 chr1:984302 synonymous SNV . 0 26 hm5C_associated_SNPs_2142 1 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:984301-984316
64251 chr1 990687 990687 1 + G A rs4308921 990679 + 990659 990699 41 CTCCTGAATCACCCTCGCTCCGTCAGGCGGGACTCGTGTCC CTCCTGAATCACCCTCGCTCCGTCAGGCAGGACTCGTGTCC < 41bp 1 0.393352712346087 1 0.131349325180054 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGRN ENSG00000242590 ncRNA_intronic Human sense_intronic chr1:990679 chr1:990687 . . 0 29 hm5C_associated_SNPs_2143 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:990662-990694
64251 chr1 1227288 1227288 1 + C T rs549619477 1227297 + 1227277 1227317 41 GCATGTCCACACGTCTGATGCACCTGTGTACGTGTGTCAAG GCATGTCCACATGTCTGATGCACCTGTGTACGTGTGTCAAG < 41bp 1 0.478457228408254 1 0.0384926795959473 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCNN1D ENSG00000162572 UTR3 Human protein_coding chr1:1227297 chr1:1227288 . . 0 12 hm5C_associated_SNPs_2144 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:1227264-1227289
64251 chr1 1246360 1246360 1 + T C rs149289867 1246369 + 1246349 1246389 41 GTGAAGACGATTCTGGAGAGCCAAGATCCCCTGGGCAAGCA GTGAAGACGATCCTGGAGAGCCAAGATCCCCTGGGCAAGCA < 41bp 1 0.398863666380352 1 0.252484798431396 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246369 chr1:1246360 synonymous SNV . 0 12 hm5C_associated_SNPs_2145 0 0 8 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr1:1246338-1246363
64251 chr1 1246373 1246373 1 + G A rs142154083 1246369 + 1246349 1246389 41 GTGAAGACGATTCTGGAGAGCCAAGATCCCCTGGGCAAGCA GTGAAGACGATTCTGGAGAGCCAAAATCCCCTGGGCAAGCA < 41bp 1 0.471843439938908 1 0.219331979751587 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246369 chr1:1246373 nonsynonymous SNV 0.162 2 25 hm5C_associated_SNPs_2146 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1246356-1246391
64251 chr1 1262957 1262957 1 + C T rs140494438 1262964 + 1262944 1262984 41 ACCACCCCTGGGTCGTGCGCCGCGCCGTCACCGTGGCCTTC ACCACCCCTGGGTTGTGCGCCGCGCCGTCACCGTGGCCTTC < 41bp 1 0.520885795413294 1 0.085157722234726 experiment 0.958228409173412 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPTP ENSG00000224051 CDS Human protein_coding chr1:1262964 chr1:1262957 synonymous SNV . 0 14 hm5C_associated_SNPs_2147 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:1262919-1262962
64251 chr1 1374805 1374805 1 + G C rs2275916 1374813 + 1374793 1374833 41 ACGCAGCTCGCCGCCCTCCCCGCCCCAGAGGAGGCCGGGCC ACGCAGCTCGCCCCCCTCCCCGCCCCAGAGGAGGCCGGGCC < 41bp 1 0.436692100430238 1 0.387280017137527 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VWA1 ENSG00000179403 CDS Human protein_coding chr1:1374813 chr1:1374805 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_2150 0 0 4 RPS3 POSTAR2 ENCODE chr1:1374740-1374829
64251 chr1 1375947 1375947 1 + T G rs13683 1375960 + 1375940 1375980 41 ATCTTCTTGCTGTGAGAGGTCTCACCCCGGGCTACCTCCTG ATCTTCTGGCTGTGAGAGGTCTCACCCCGGGCTACCTCCTG < 41bp 1 0.156681240804156 1 0.0648290514945984 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VWA1 ENSG00000179403 UTR3 Human protein_coding chr1:1375960 chr1:1375947 . . 0 8 hm5C_associated_SNPs_2151 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:1375934-1375957
64251 chr1 1413884 1413884 1 + A G rs368365041 1413864 + 1413844 1413884 41 GGTCTGGATTCCTCCAGGGCCTGATCCTGGGTGCAGATGCA GGTCTGGATTCCTCCAGGGCCTGATCCTGGGTGCAGATGCG < 41bp 1 0.34480516767996 1 0.11283266544342 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATAD3B ENSG00000160072 intronic Human protein_coding chr1:1413864 chr1:1413884 . . 0 41 hm5C_associated_SNPs_2152 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1413858-1413886
64251 chr1 1413948 1413948 1 + T A rs369198244 1413964 + 1413944 1413984 41 GAGCTGTGCAGACACAGGAGCGGCTGTCAGGCAGTGCCAGC GAGCAGTGCAGACACAGGAGCGGCTGTCAGGCAGTGCCAGC < 41bp 1 0.469148104546038 1 0.109680891036987 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATAD3B ENSG00000160072 intronic Human protein_coding chr1:1413964 chr1:1413948 . . 0 5 hm5C_associated_SNPs_2153 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:1413863-1413953
64251 chr1 1425667 1425667 1 + T C rs61737193 1425666 + 1425646 1425686 41 GGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCA GGTCCTGGCCAGCAATCTGCCCGAGCAGTTCGACTGTGCCA < 41bp 1 0.344981579822863 1 0.42368295788765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1425666 chr1:1425667 synonymous SNV . 0 22 hm5C_associated_SNPs_2155 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1425635-1425673
64251 chr1 1425676 1425676 1 + C G rs61737191 1425666 + 1425646 1425686 41 GGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCA GGTCCTGGCCAGCAATCTGCCTGAGCAGTTGGACTGTGCCA < 41bp 1 0.568681519501866 1 0.29867559671402 experiment 0.862636960996269 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1425666 chr1:1425676 nonsynonymous SNV 0.000 3 31 hm5C_associated_SNPs_2156 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:1425637-1425679
64251 chr1 1447550 1447550 1 + T A rs72468212 1447557 + 1447537 1447577 41 TGCGCAGTGGCGGTGACCACCGGCTCGCGGCGCGTGGAGGC TGCGCAGTGGCGGAGACCACCGGCTCGCGGCGCGTGGAGGC < 41bp 1 0.682149038633797 1 0.628396213054657 experiment 0.635701922732406 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATAD3A ENSG00000197785 UTR5 Human protein_coding chr1:1447557 chr1:1447550 . . 0 14 hm5C_associated_SNPs_2158 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:1447549-1447575
64251 chr1 1469855 1469855 1 + C G rs114679139 1469872 + 1469852 1469892 41 GGGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAAC GGGGGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAAC < 41bp 1 0.622106162271284 1 0.384013712406158 experiment 0.755787675457431 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469872 chr1:1469855 . . 0 4 hm5C_associated_SNPs_2162 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:1469840-1469860
64251 chr1 1469855 1469855 1 + C G rs114679139 1469873 + 1469853 1469893 41 GGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACC GGGGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACC < 41bp 1 0.719275925740141 1 0.469836622476578 experiment 0.561448148519717 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469873 chr1:1469855 . . 0 3 hm5C_associated_SNPs_2163 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:1469840-1469860
64251 chr1 1469861 1469861 1 + C T rs116603779 1469872 + 1469852 1469892 41 GGGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAAC GGGCGCCTGTCAGGGCCAGACCCAGGTGGGGCAGCCTGAAC < 41bp 1 0.650228042719886 1 0.27381032705307 experiment 0.699543914560228 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469872 chr1:1469861 . . 0 10 hm5C_associated_SNPs_2164 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:1469841-1469889
64251 chr1 1469861 1469861 1 + C T rs116603779 1469873 + 1469853 1469893 41 GGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAACC GGCGCCTGTCAGGGCCAGACCCAGGTGGGGCAGCCTGAACC < 41bp 1 0.70227574702069 1 0.479563266038895 experiment 0.595448505958621 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469873 chr1:1469861 . . 0 9 hm5C_associated_SNPs_2165 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:1469841-1469889
64251 chr1 1469874 1469874 1 + C G rs138599210 1469872 + 1469852 1469892 41 GGGCGCCTGCCAGGGCCAGACCCAGGTGGGGCAGCCTGAAC GGGCGCCTGCCAGGGCCAGACCGAGGTGGGGCAGCCTGAAC < 41bp 1 0.721975709260628 1 0.796228766441345 experiment 0.556048581478743 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469872 chr1:1469874 . . 0 23 hm5C_associated_SNPs_2166 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:1469841-1469889
64251 chr1 1552574 1552574 1 + G A rs28475060 1552577 + 1552557 1552597 41 ACTCCATGGCCTGTGGCGTGCCACACACAGCGGCATTTCGG ACTCCATGGCCTGTGGCATGCCACACACAGCGGCATTTCGG < 41bp 1 0.189126505527513 1 0.09310182929039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIB2 ENSG00000197530 intronic Human protein_coding chr1:1552577 chr1:1552574 . . 0 18 hm5C_associated_SNPs_2167 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:1552528-1552578
64251 chr1 1552582 1552582 1 + C A rs189897061 1552577 + 1552557 1552597 41 ACTCCATGGCCTGTGGCGTGCCACACACAGCGGCATTTCGG ACTCCATGGCCTGTGGCGTGCCACAAACAGCGGCATTTCGG < 41bp 1 0.161852054331408 1 0.0940921902656555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIB2 ENSG00000197530 intronic Human protein_coding chr1:1552577 chr1:1552582 . . 0 26 hm5C_associated_SNPs_2168 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1552551-1552589
64251 chr1 1564858 1564858 1 + G A rs116670248 1564862 + 1564842 1564882 41 ACGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTG ACGTGGGCGCCGCGCCAGGGCCCGAGGCCGCTGAGTGCCTG < 41bp 1 0.748329075641228 1 0.328031659126282 experiment 0.503341848717545 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564862 chr1:1564858 synonymous SNV . 0 17 hm5C_associated_SNPs_2169 0 0 1 FXR2 POSTAR2 ENCODE chr1:1564844-1564947
64251 chr1 1564858 1564858 1 + G A rs116670248 1564863 + 1564843 1564883 41 CGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGG CGTGGGCGCCGCGCCAGGGCCCGAGGCCGCTGAGTGCCTGG < 41bp 1 0.464564993072237 1 0.650409162044525 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564863 chr1:1564858 synonymous SNV . 0 16 hm5C_associated_SNPs_2170 0 0 1 FXR2 POSTAR2 ENCODE chr1:1564844-1564947
64251 chr1 1564858 1564858 1 + G A rs116670248 1564864 + 1564844 1564884 41 GTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGT GTGGGCGCCGCGCCAGGGCCCGAGGCCGCTGAGTGCCTGGT < 41bp 1 0.597682168768129 1 0.752204895019531 experiment 0.804635662463742 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564864 chr1:1564858 synonymous SNV . 0 15 hm5C_associated_SNPs_2171 0 0 1 FXR2 POSTAR2 ENCODE chr1:1564844-1564947
64251 chr1 1564858 1564858 1 + G A rs116670248 1564869 + 1564849 1564889 41 CGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCT CGCCGCGCCAGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCT < 41bp 1 0.222085268859501 1 0.151188313961029 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564869 chr1:1564858 synonymous SNV . 0 10 hm5C_associated_SNPs_2172 0 0 1 FXR2 POSTAR2 ENCODE chr1:1564844-1564947
64251 chr1 1564858 1564858 1 + G A rs116670248 1564870 + 1564850 1564890 41 GCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCTC GCCGCGCCAGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCTC < 41bp 1 0.52722366504779 1 0.422722995281219 experiment 0.945552669904421 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564870 chr1:1564858 synonymous SNV . 0 9 hm5C_associated_SNPs_2173 0 0 1 FXR2 POSTAR2 ENCODE chr1:1564844-1564947
64251 chr1 2160676 2160676 1 + G A rs569206617 2160685 + 2160665 2160705 41 ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATCCT ACGGCCGACCAACTGGAGATCCTCAAAGTCATGGGCATCCT < 41bp 1 0.183881537417263 1 0.0284508764743805 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2160685 chr1:2160676 synonymous SNV . 0 12 hm5C_associated_SNPs_2177 2 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2160644-2160687
64251 chr1 2240448 2240448 1 + C T rs577306431 2240437 + 2240417 2240457 41 CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGG CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGTGGTCAGTGG < 41bp 1 0.469693637091355 1 0.400444954633713 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240437 chr1:2240448 . . 0 32 hm5C_associated_SNPs_2179 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240448 2240448 1 + C T rs577306431 2240444 + 2240424 2240464 41 TTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGG TTTCCTGCAGCTGCCAGGCCCGTGTGGTCAGTGGGACCCGG < 41bp 1 0.460792566066322 1 0.0885523855686188 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240444 chr1:2240448 . . 0 25 hm5C_associated_SNPs_2180 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240449 2240449 1 + G A rs546360013 2240437 + 2240417 2240457 41 CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGG CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGCAGTCAGTGG < 41bp 1 0.446800277243362 1 0.386055886745453 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240437 chr1:2240449 . . 0 33 hm5C_associated_SNPs_2181 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240449 2240449 1 + G A rs546360013 2240444 + 2240424 2240464 41 TTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGG TTTCCTGCAGCTGCCAGGCCCGTGCAGTCAGTGGGACCCGG < 41bp 1 0.332567919684349 1 0.209518700838089 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240444 chr1:2240449 . . 0 26 hm5C_associated_SNPs_2182 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240449 2240449 1 + G A rs546360013 2240448 + 2240428 2240468 41 CTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGGACGT CTGCAGCTGCCAGGCCCGTGCAGTCAGTGGGACCCGGACGT < 41bp 1 0.430558517789686 1 0.119547188282013 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240448 chr1:2240449 . . 0 22 hm5C_associated_SNPs_2183 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240454 2240454 1 + G C rs78207415 2240437 + 2240417 2240457 41 CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGG CCCACCCTTTCCTGCAGCTGCCAGGCCCGTGCGGTCACTGG < 41bp 1 0.469221826152494 1 0.411744832992554 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240437 chr1:2240454 . . 0 38 hm5C_associated_SNPs_2184 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240454 2240454 1 + G C rs78207415 2240444 + 2240424 2240464 41 TTTCCTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGG TTTCCTGCAGCTGCCAGGCCCGTGCGGTCACTGGGACCCGG < 41bp 1 0.405093403143018 1 0.0928599834442139 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240444 chr1:2240454 . . 0 31 hm5C_associated_SNPs_2185 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240454 2240454 1 + G C rs78207415 2240448 + 2240428 2240468 41 CTGCAGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGGACGT CTGCAGCTGCCAGGCCCGTGCGGTCACTGGGACCCGGACGT < 41bp 1 0.43566348954742 1 0.395368099212646 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240448 chr1:2240454 . . 0 27 hm5C_associated_SNPs_2186 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 2240454 2240454 1 + G C rs78207415 2240452 + 2240432 2240472 41 AGCTGCCAGGCCCGTGCGGTCAGTGGGACCCGGACGTGGGC AGCTGCCAGGCCCGTGCGGTCACTGGGACCCGGACGTGGGC < 41bp 1 0.691238809840458 1 0.148169636726379 experiment 0.617522380319084 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240452 chr1:2240454 . . 0 23 hm5C_associated_SNPs_2187 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr1 6159665 6159665 1 + G A rs115846477 6159666 + 6159646 6159686 41 CCGCCCGCCAGCCCAGGCCGCTGCTCTGCACCGAGCTGGTG CCGCCCGCCAGCCCAGGCCACTGCTCTGCACCGAGCTGGTG < 41bp 1 0.388410448439245 1 0.0475032925605774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KCNAB2 ENSG00000069424 UTR3 Human protein_coding chr1:6159666 chr1:6159665 . . 0 20 hm5C_associated_SNPs_2198 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:6159608-6159672
64251 chr1 6271125 6271125 1 + A G rs1052598 6271142 + 6271122 6271162 41 GCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG GCCGCTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG < 41bp 1 0.40108826475609 1 0.331417262554169 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF207 ENSG00000158286 CDS Human protein_coding chr1:6271142 chr1:6271125 synonymous SNV . 0 4 hm5C_associated_SNPs_2200 0 0 5 DDX24 POSTAR2 ENCODE chr1:6271086-6271137
64251 chr1 6681811 6681811 1 + A G rs78180692 6681810 + 6681790 6681830 41 TGGTGCGGGCAGATCCCTGCCATTTAGGTGCCTAAGCAAAA TGGTGCGGGCAGATCCCTGCCGTTTAGGTGCCTAAGCAAAA < 41bp 1 0.0758840314516132 1 0.0895788669586182 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHF13 ENSG00000116273 UTR3 Human protein_coding chr1:6681810 chr1:6681811 . . 0 22 hm5C_associated_SNPs_2201 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:6681800-6681820
64251 chr1 6694556 6694556 1 - C A rs59818822 6694565 - 6694545 6694585 41 GACAGCTGGCGCGGGGGGCCCCAAGCTGCGCCGGCCTCCAG GACAGCTGGCGCGGGGGGCCCCAAGCTGCTCCGGCCTCCAG < 41bp 1 0.758791565710997 1 0.410615891218185 experiment 0.482416868578006 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694565 chr1:6694556 . . 0 30 hm5C_associated_SNPs_2202 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:6694544-6694567
64251 chr1 6694574 6694574 1 - G A rs6804 6694565 - 6694545 6694585 41 GACAGCTGGCGCGGGGGGCCCCAAGCTGCGCCGGCCTCCAG GACAGCTGGCGTGGGGGGCCCCAAGCTGCGCCGGCCTCCAG < 41bp 1 0.763441296195635 1 0.481051445007324 experiment 0.473117407608731 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694565 chr1:6694574 . . 0 12 hm5C_associated_SNPs_2203 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:6694563-6694584
64251 chr1 6694575 6694575 1 - C T rs530378430 6694565 - 6694545 6694585 41 GACAGCTGGCGCGGGGGGCCCCAAGCTGCGCCGGCCTCCAG GACAGCTGGCACGGGGGGCCCCAAGCTGCGCCGGCCTCCAG < 41bp 1 0.779517750536638 1 0.427025616168976 experiment 0.440964498926723 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694565 chr1:6694575 . . 0 11 hm5C_associated_SNPs_2204 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:6694563-6694584
64251 chr1 6947963 6947963 1 + G A rs138999762 6947961 + 6947941 6947981 41 GTGACCTACTCTTGCCTCATCCGGAGTTATTACGAAGGAGC GTGACCTACTCTTGCCTCATCCAGAGTTATTACGAAGGAGC < 41bp 1 0.116634958607335 1 0.758460164070129 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122261;BS-seq with improved protocol;Hela;Control CAMTA1 ENSG00000171735 UTR3 Human protein_coding chr1:6947961 chr1:6947963 . . 0 23 hm5C_associated_SNPs_2205 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:6947913-6947966
64251 chr1 6947973 6947973 1 + C T rs3827726 6947961 + 6947941 6947981 41 GTGACCTACTCTTGCCTCATCCGGAGTTATTACGAAGGAGC GTGACCTACTCTTGCCTCATCCGGAGTTATTATGAAGGAGC < 41bp 1 0.171396955241337 1 0.742961227893829 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122261;BS-seq with improved protocol;Hela;Control CAMTA1 ENSG00000171735 UTR3 Human protein_coding chr1:6947961 chr1:6947973 . . 0 33 hm5C_associated_SNPs_2206 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:6947918-6947986
64251 chr1 9324133 9324133 1 + G A rs201056307 9324137 + 9324117 9324157 41 TTTCCCAGCAGCAGCCGGAGCAGCTGGTGCCAGGGCCAGGG TTTCCCAGCAGCAGCCAGAGCAGCTGGTGCCAGGGCCAGGG < 41bp 1 0.494924038574171 1 0.469828337430954 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control H6PD ENSG00000049239 CDS Human protein_coding chr1:9324137 chr1:9324133 synonymous SNV . 0 17 hm5C_associated_SNPs_2207 0 0 1 METAP2 POSTAR2 ENCODE chr1:9324113-9324161
64251 chr1 9325265 9325265 1 + C A rs9435159 9325247 + 9325227 9325267 41 ACCAGCACAACACGGGATGGCGCCCAAACTCCGGCGTTCAC ACCAGCACAACACGGGATGGCGCCCAAACTCCGGCGTTAAC < 41bp 1 0.17982832808804 1 0.128338545560837 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control H6PD ENSG00000049239 UTR3 Human protein_coding chr1:9325247 chr1:9325265 . . 0 39 hm5C_associated_SNPs_2208 0 0 1 IGF2BP3 POSTAR2 ENCODE chr1:9325232-9325282
64251 chr1 9326379 9326379 1 + C T rs145734712 9326397 + 9326377 9326417 41 CACGAACTCTCTGCCTGAGACTGGGGAAGTAAGCGGGTATC CATGAACTCTCTGCCTGAGACTGGGGAAGTAAGCGGGTATC < 41bp 1 0.708678086336657 1 0.513402223587036 experiment 0.582643827326686 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control H6PD ENSG00000049239 UTR3 Human protein_coding chr1:9326397 chr1:9326379 . . 0 3 hm5C_associated_SNPs_2209 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9326336-9326392
64251 chr1 9329364 9329364 1 + G A rs61744613 9329345 + 9329325 9329365 41 CATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCGT CATTCCCTCTCTCCGCAACTCTCCCGTGAGGCTGCACCCAT < 41bp 1 0.407318894963324 1 0.273618936538696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control H6PD ENSG00000049239 UTR3 Human protein_coding chr1:9329345 chr1:9329364 . . 0 40 hm5C_associated_SNPs_2210 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:9329332-9329385
64251 chr1 9329364 9329364 1 + G A rs61744613 9329362 + 9329342 9329382 41 ACTCTCCCGTGAGGCTGCACCCGTGTGGGTAGCACTGGAAG ACTCTCCCGTGAGGCTGCACCCATGTGGGTAGCACTGGAAG < 41bp 1 0.173612886882788 1 0.139590084552765 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control H6PD ENSG00000049239 UTR3 Human protein_coding chr1:9329362 chr1:9329364 . . 0 23 hm5C_associated_SNPs_2211 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:9329332-9329385
64251 chr1 9416003 9416003 1 + C T rs145906145 9415999 + 9415979 9416019 41 AGACTGTGGACATGAGGGACCCCACGTACAGGCCCCTGAAG AGACTGTGGACATGAGGGACCCCATGTACAGGCCCCTGAAG < 41bp 1 0.172156390708846 1 0.112817615270615 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9415999 chr1:9416003 nonsynonymous SNV 0.992 1 25 hm5C_associated_SNPs_2212 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:9416003-9416004
64251 chr1 9670738 9670738 1 + C A rs114072438 9670727 + 9670707 9670747 41 GGACAGAAGCTGCTGCTGTTCCCGTCACCCCCTGGAGAGGC GGACAGAAGCTGCTGCTGTTCCCGTCACCCCATGGAGAGGC < 41bp 1 0.425179276820001 1 0.126682281494141 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9670727 chr1:9670738 nonsynonymous SNV 0.005 1 32 hm5C_associated_SNPs_2213 0 0 1 IGF2BP2 POSTAR2 ENCODE chr1:9670673-9670773
64251 chr1 10367591 10367591 1 + T C rs1065828 10367609 + 10367589 10367629 41 AATTCCTAACCTCAGGTGATCCACCTGCCTTGGCCTCCCAA AACTCCTAACCTCAGGTGATCCACCTGCCTTGGCCTCCCAA < 41bp 1 0.0233231587954297 1 0.161479949951172 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10367609 chr1:10367591 . . 0 3 hm5C_associated_SNPs_2223 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:10367567-10367599
64251 chr1 10367591 10367591 1 + T C rs1065828 10367610 + 10367590 10367630 41 ATTCCTAACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAA ACTCCTAACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAA < 41bp 1 0.229688759957663 1 0.128813892602921 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIF1B ENSG00000054523 UTR3 Human protein_coding chr1:10367610 chr1:10367591 . . 0 2 hm5C_associated_SNPs_2224 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:10367567-10367599
64251 chr1 10479791 10479791 1 + G A rs41274480 10479787 + 10479767 10479807 41 CCATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT CCATGGTGGCACCGTGTCATCCTCATCATACAATGCCTGAT < 41bp 1 0.39113789933221 1 0.0617382824420929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PGD ENSG00000142657 CDS Human protein_coding chr1:10479787 chr1:10479791 synonymous SNV . 0 25 hm5C_associated_SNPs_2241 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr1 10480076 10480076 1 + G A rs560336478 10480094 + 10480074 10480114 41 CCGTGTGCTGGTGCGGTTCCCATCACGCAGACAGGAAGGGT CCATGTGCTGGTGCGGTTCCCATCACGCAGACAGGAAGGGT < 41bp 1 0.703519806223472 1 0.288218945264816 experiment 0.592960387553055 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PGD ENSG00000142657 UTR3 Human protein_coding chr1:10480094 chr1:10480076 . . 0 3 hm5C_associated_SNPs_2242 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:10479955-10480124
64251 chr1 10491261 10491261 1 + A C rs146147287 10491244 + 10491224 10491264 41 TTCGTTCCTTTCATCAGCGCCGGGCATATGGGGCGTCAGAG TTCGTTCCTTTCATCAGCGCCGGGCATATGGGGCGTCCGAG < 41bp 1 0.26427912972414 1 0.726519882678986 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CENPS-CORT ENSG00000175279 UTR5 Human protein_coding chr1:10491244 chr1:10491261 . . 0 38 hm5C_associated_SNPs_2243 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:10491261-10491288
64251 chr1 11897082 11897082 1 + C A rs41275500 11897086 + 11897066 11897106 41 TCCTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCAGTCC TCCTCACCCGGGCTGGAGAGCAGCGCAAACGGAGCCAGTCC < 41bp 1 0.723973742809497 1 0.733003079891205 experiment 0.552052514381007 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897086 chr1:11897082 synonymous SNV . 0 17 hm5C_associated_SNPs_2247 0 0 3 BUD13 POSTAR2 ENCODE chr1:11897026-11897100
64251 chr1 12009956 12009956 1 + G A rs7551175 12009955 + 12009935 12009975 41 GAGGATCTGGTCATTCTCTTCGCAGACAGGTAGGTGGGTCA GAGGATCTGGTCATTCTCTTCACAGACAGGTAGGTGGGTCA < 41bp 1 0.502563866326686 1 0.658891916275024 experiment 0.994872267346627 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009955 chr1:12009956 nonsynonymous SNV 0.911 0 22 hm5C_associated_SNPs_2249 2 0 3 DDX24 POSTAR2 ENCODE chr1:12009877-12009966
64251 chr1 12042096 12042096 1 + C G rs7538183 12042094 + 12042074 12042114 41 TGAGACAGGACAGAAGAGAACTCAGAATCTTTTTGTCTTTT TGAGACAGGACAGAAGAGAACTGAGAATCTTTTTGTCTTTT < 41bp 1 0.423383180175594 1 0.0976514220237732 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MFN2 ENSG00000116688 UTR5 Human protein_coding chr1:12042094 chr1:12042096 . . 0 23 hm5C_associated_SNPs_2250 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:12042028-12042121
64251 chr1 12061533 12061533 1 + G A rs41278630 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCCAGGCCAGGGACCGCATCTTCTTTGTGTCTGCTAAGGA < 41bp 1 0.216461225695756 1 0.0878639221191406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061533 nonsynonymous SNV 0.781 2 10 hm5C_associated_SNPs_2251 4 0 1 FXR2 POSTAR2 ENCODE chr1:12061494-12061561
64251 chr1 12061830 12061830 1 + C T rs141475476 12061838 + 12061818 12061858 41 CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTCAAGTGAGGA CCTCCTAGGGGGTGCTCTCGCAGAAGGCTTTCAAGTGAGGA < 41bp 1 0.763640993165465 1 0.678593158721924 experiment 0.472718013669069 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061838 chr1:12061830 synonymous SNV . 0 13 hm5C_associated_SNPs_2252 4 0 1 FXR2 POSTAR2 ENCODE chr1:12061825-12061840
64251 chr1 12072932 12072932 1 + G A rs150255183 12072939 + 12072919 12072959 41 TTCCTAGAAATAAGCAACACCTCTCCCAAAAAGCAGCCCAC TTCCTAGAAATAAACAACACCTCTCCCAAAAAGCAGCCCAC < 41bp 1 0.132345771670383 1 0.611884891986847 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12072939 chr1:12072932 . . 0 14 hm5C_associated_SNPs_2253 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:12072845-12072943
64251 chr1 12091925 12091925 1 + G T rs114136497 12091931 + 12091911 12091951 41 CTCCCCTCTGGCAGGCGCACCCAGGAGATGGAATCCCCTGC CTCCCCTCTGGCAGTCGCACCCAGGAGATGGAATCCCCTGC < 41bp 1 0.612172930866913 1 0.710017144680023 experiment 0.775654138266173 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIIP ENSG00000116691 UTR3 Human protein_coding chr1:12091931 chr1:12091925 . . 0 15 hm5C_associated_SNPs_2256 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:12091889-12091937
64251 chr1 12091946 12091946 1 + C T rs546283307 12091931 + 12091911 12091951 41 CTCCCCTCTGGCAGGCGCACCCAGGAGATGGAATCCCCTGC CTCCCCTCTGGCAGGCGCACCCAGGAGATGGAATCTCCTGC < 41bp 1 0.568108210087342 1 0.477336645126343 experiment 0.863783579825315 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIIP ENSG00000116691 UTR3 Human protein_coding chr1:12091931 chr1:12091946 . . 0 36 hm5C_associated_SNPs_2257 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:12091922-12091977
64251 chr1 12092044 12092044 1 + G A rs186593876 12092038 + 12092018 12092058 41 GAGTTCCAGAGAGGGAGGACCCTGGGGTGGAGGGTGAGGGA GAGTTCCAGAGAGGGAGGACCCTGGGATGGAGGGTGAGGGA < 41bp 1 0.525833608186897 1 0.393742799758911 experiment 0.948332783626207 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MIIP ENSG00000116691 UTR3 Human protein_coding chr1:12092038 chr1:12092044 . . 0 27 hm5C_associated_SNPs_2258 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:12092021-12092053
64251 chr1 12092055 12092055 1 + G C rs531145545 12092038 + 12092018 12092058 41 GAGTTCCAGAGAGGGAGGACCCTGGGGTGGAGGGTGAGGGA GAGTTCCAGAGAGGGAGGACCCTGGGGTGGAGGGTGACGGA < 41bp 1 0.531595240672794 1 0.478969901800156 experiment 0.936809518654412 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MIIP ENSG00000116691 UTR3 Human protein_coding chr1:12092038 chr1:12092055 . . 0 38 hm5C_associated_SNPs_2259 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:12092026-12092069
64251 chr1 12317052 12317052 1 + C T rs138858983 12317053 + 12317033 12317073 41 CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTCCTC CTAATACAAAGCTGCAATATCGGCAAATCATGGAATTCCTC < 41bp 1 0.293913065778547 1 0.706778764724731 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12317053 chr1:12317052 synonymous SNV . 0 20 hm5C_associated_SNPs_2260 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:12317041-12317064
64251 chr1 15546761 15546761 1 + G A rs7681 15546762 + 15546742 15546782 41 GGCTCAGGTGGCGGCTCTCGCAGAGCCCCTGATGCTGTTGT GGCTCAGGTGGCGGCTCTCACAGAGCCCCTGATGCTGTTGT < 41bp 1 0.771383256471826 1 0.77730655670166 experiment 0.457233487056349 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM51 ENSG00000171729 UTR3 Human protein_coding chr1:15546762 chr1:15546761 . . 0 20 hm5C_associated_SNPs_2262 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:15546761-15546781
64251 chr1 15756406 15756406 1 + C T rs115472852 15756420 + 15756400 15756440 41 CTGTGTCGTGAAACTGTGACCATCACTCAGTCCAAACAAGT CTGTGTTGTGAAACTGTGACCATCACTCAGTCCAAACAAGT < 41bp 1 0.346387274273542 1 0.0524154305458069 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EFHD2 ENSG00000142634 UTR3 Human protein_coding chr1:15756420 chr1:15756406 . . 0 7 hm5C_associated_SNPs_2263 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:15756250-15756415
64251 chr1 15993415 15993415 1 + A G rs144568839 15993398 + 15993378 15993418 41 CAGATGCTGTGGGCCTAAAACAGCTCTTTAAAAATCTATTT CAGATGCTGTGGGCCTAAAACAGCTCTTTAAAAATCTGTTT < 41bp 1 0.350385866900859 1 0.622523128986359 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSC1A1;PLEKHM2 ENSG00000197312 UTR3 Human protein_coding chr1:15993398 chr1:15993415 . . 0 38 hm5C_associated_SNPs_2264 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:15993400-15993424
64251 chr1 15993416 15993416 1 + T C rs147468893 15993398 + 15993378 15993418 41 CAGATGCTGTGGGCCTAAAACAGCTCTTTAAAAATCTATTT CAGATGCTGTGGGCCTAAAACAGCTCTTTAAAAATCTACTT < 41bp 1 0.360397460847893 1 0.646910548210144 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSC1A1;PLEKHM2 ENSG00000197312 UTR3 Human protein_coding chr1:15993398 chr1:15993416 . . 0 39 hm5C_associated_SNPs_2265 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:15993400-15993424
64251 chr1 16056364 16056364 1 + G A rs3817269 16056369 + 16056349 16056389 41 CCCCAGCATCCTGACGGATGCCACCATGGAGAAGCTGGCAC CCCCAGCATCCTGACAGATGCCACCATGGAGAAGCTGGCAC < 41bp 1 0.0650160557731241 1 0.0659830868244171 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056369 chr1:16056364 synonymous SNV . 0 16 hm5C_associated_SNPs_2266 0 0 2 DDX6 POSTAR2 ENCODE chr1:16056351-16056394
64251 chr1 16056364 16056364 1 + G A rs3817269 16056373 + 16056353 16056393 41 AGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGC AGCATCCTGACAGATGCCACCATGGAGAAGCTGGCACTGGC < 41bp 1 0.358224691599603 1 0.441890299320221 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056373 chr1:16056364 synonymous SNV . 0 12 hm5C_associated_SNPs_2267 0 0 2 DDX6 POSTAR2 ENCODE chr1:16056351-16056394
64251 chr1 16199344 16199344 1 + C T rs375389506 16199355 + 16199335 16199375 41 AATTCTTCCCAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT AATTCTTCCTAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT < 41bp 1 0.441048253352936 1 0.857460677623749 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199355 chr1:16199344 synonymous SNV . 0 10 hm5C_associated_SNPs_2268 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:16199300-16199360
64251 chr1 16260513 16260513 1 + A G rs77870948 16260507 + 16260487 16260527 41 AAAAACAGCACCTCCAGTGACAAACAACTCTGAGATACAAG AAAAACAGCACCTCCAGTGACAAACAGCTCTGAGATACAAG < 41bp 1 0.048913501483371 1 0.119704723358154 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16260507 chr1:16260513 nonsynonymous SNV 0.015 0 27 hm5C_associated_SNPs_2269 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:16260500-16260520
64251 chr1 16260513 16260513 1 + A G rs77870948 16260511 + 16260491 16260531 41 ACAGCACCTCCAGTGACAAACAACTCTGAGATACAAGCCTC ACAGCACCTCCAGTGACAAACAGCTCTGAGATACAAGCCTC < 41bp 1 0.294347130699053 1 0.735147655010223 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16260511 chr1:16260513 nonsynonymous SNV 0.015 0 23 hm5C_associated_SNPs_2270 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:16260500-16260520
64251 chr1 16261814 16261814 1 + C A rs41269151 16261811 + 16261791 16261831 41 CAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGG CAAAGCTAGATGCTCATTCTCCTAGACCAAGTGGACCCGGG < 41bp 1 0.0758416595144839 1 0.248005896806717 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261811 chr1:16261814 synonymous SNV . 0 24 hm5C_associated_SNPs_2271 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:16261760-16261840
64251 chr1 16724451 16724451 1 + A G rs572345201 16724449 + 16724429 16724469 41 TGTTTTCTGGTCGTGTGATCCCAGGGGTGCACATGGGCCCC TGTTTTCTGGTCGTGTGATCCCGGGGGTGCACATGGGCCCC < 41bp 1 0.776893796641798 1 0.903816998004913 experiment 0.446212406716404 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16724449 chr1:16724451 . . 0 23 hm5C_associated_SNPs_2274 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:16724221-16724518
64251 chr1 16724462 16724462 1 + T C rs534503854 16724449 + 16724429 16724469 41 TGTTTTCTGGTCGTGTGATCCCAGGGGTGCACATGGGCCCC TGTTTTCTGGTCGTGTGATCCCAGGGGTGCACACGGGCCCC < 41bp 1 0.711339465713553 1 0.801617741584778 experiment 0.577321068572895 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SZRD1 ENSG00000055070 UTR3 Human protein_coding chr1:16724449 chr1:16724462 . . 0 34 hm5C_associated_SNPs_2275 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:16724221-16724518
64251 chr1 17053781 17053781 1 + C T rs575820869 17053782 + 17053762 17053802 41 GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGAA GGCCGTGGGTGTGTAGAGGTCTTGGTGGTGCAGTGGTAGAA < 41bp 1 0.612786803713705 1 0.144563913345337 experiment 0.774426392572589 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053782 chr1:17053781 . . 0 20 hm5C_associated_SNPs_2276 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053791 17053791 1 + G T rs79963399 17053782 + 17053762 17053802 41 GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGAA GGCCGTGGGTGTGTAGAGGCCTTGGTGGTTCAGTGGTAGAA < 41bp 1 0.512898807601731 1 0.115259110927582 experiment 0.974202384796538 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053782 chr1:17053791 . . 0 30 hm5C_associated_SNPs_2277 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053791 17053791 1 + G T rs79963399 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTTCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC < 41bp 1 0.739350257527629 1 0.21833461523056 experiment 0.521299484944742 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053791 . . 0 7 hm5C_associated_SNPs_2278 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053791 17053791 1 + G T rs79963399 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTTCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC < 41bp 1 0.608112729491567 1 0.45335665345192 experiment 0.783774541016866 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053791 . . 0 5 hm5C_associated_SNPs_2279 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053791 17053791 1 + G T rs79963399 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTTCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG < 41bp 1 0.0826861821089323 1 0.163949698209763 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053791 . . 0 3 hm5C_associated_SNPs_2280 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053791 17053791 1 + G T rs79963399 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TTCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG < 41bp 1 0.202245937337508 1 0.779016017913818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053791 . . 0 2 hm5C_associated_SNPs_2281 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053782 + 17053762 17053802 41 GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGAA GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCCGTGGTAGAA < 41bp 1 0.555167940839012 1 0.207430869340897 experiment 0.889664118321975 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053782 chr1:17053793 . . 0 32 hm5C_associated_SNPs_2282 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053792 + 17053772 17053812 41 GTGTAGAGGCCTTGGTGGTGCAGTGGTAGAATTCTCGCCTC GTGTAGAGGCCTTGGTGGTGCCGTGGTAGAATTCTCGCCTC < 41bp 1 0.721952400955416 1 0.378380507230759 experiment 0.556095198089168 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053792 chr1:17053793 . . 0 22 hm5C_associated_SNPs_2283 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCCGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC < 41bp 1 0.781403792570555 1 0.278227210044861 experiment 0.43719241485889 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053793 . . 0 9 hm5C_associated_SNPs_2284 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCCGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC < 41bp 1 0.625697447860235 1 0.363987028598785 experiment 0.74860510427953 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053793 . . 0 7 hm5C_associated_SNPs_2285 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCCGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG < 41bp 1 0.0648508600620695 1 0.0961242914199829 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053793 . . 0 5 hm5C_associated_SNPs_2286 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCCGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG < 41bp 1 0.205771167956808 1 0.721898436546326 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053793 . . 0 4 hm5C_associated_SNPs_2287 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CCGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT < 41bp 1 0.232799500618236 1 0.239953309297562 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053793 . . 0 2 hm5C_associated_SNPs_2288 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053793 17053793 1 + A C rs2419167 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC CGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC < 41bp 1 0.4506669118389 1 0.372851729393005 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053793 . . 0 1 hm5C_associated_SNPs_2289 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17053774-17053797
64251 chr1 17053801 17053801 1 + A C rs2419166 17053782 + 17053762 17053802 41 GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGAA GGCCGTGGGTGTGTAGAGGCCTTGGTGGTGCAGTGGTAGCA < 41bp 1 0.544414294009625 1 0.170946896076202 experiment 0.911171411980749 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053782 chr1:17053801 . . 0 40 hm5C_associated_SNPs_2290 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGCATTCTCGCCTCCCACGTGGGAGAC < 41bp 1 0.742953710568999 1 0.362646102905273 experiment 0.514092578862002 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053801 . . 0 17 hm5C_associated_SNPs_2291 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGCATTCTCGCCTCCCACGTGGGAGACCC < 41bp 1 0.684605909660155 1 0.780256867408752 experiment 0.630788180679691 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053801 . . 0 15 hm5C_associated_SNPs_2292 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGCATTCTCGCCTCCCACGTGGGAGACCCGG < 41bp 1 0.0813907599418804 1 0.230181962251663 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053801 . . 0 13 hm5C_associated_SNPs_2293 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGCATTCTCGCCTCCCACGTGGGAGACCCGGG < 41bp 1 0.222770610095418 1 0.884514927864075 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053801 . . 0 12 hm5C_associated_SNPs_2294 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGCATTCTCGCCTCCCACGTGGGAGACCCGGGTT < 41bp 1 0.214499342210259 1 0.30424377322197 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053801 . . 0 10 hm5C_associated_SNPs_2295 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGCATTCTCGCCTCCCACGTGGGAGACCCGGGTTC < 41bp 1 0.470350036931681 1 0.320701718330383 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053801 . . 0 9 hm5C_associated_SNPs_2296 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGCATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA < 41bp 1 0.704634602558419 1 0.4369857609272 experiment 0.590730794883161 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053801 . . 0 8 hm5C_associated_SNPs_2297 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053801 17053801 1 + A C rs2419166 17053816 + 17053796 17053836 41 GGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT GGTAGCATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT < 41bp 1 0.675373065299755 1 0.706743121147156 experiment 0.64925386940049 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053816 chr1:17053801 . . 0 6 hm5C_associated_SNPs_2298 0 0 44 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGAATTCTCGCCTCCCAAGTGGGAGAC < 41bp 1 0.780273126020306 1 0.34307199716568 experiment 0.439453747959387 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053816 . . 0 32 hm5C_associated_SNPs_2299 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCC < 41bp 1 0.662900850648663 1 0.547956228256226 experiment 0.674198298702673 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053816 . . 0 30 hm5C_associated_SNPs_2300 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGG < 41bp 1 0.0706624414038209 1 0.0716089308261871 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053816 . . 0 28 hm5C_associated_SNPs_2301 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGGG < 41bp 1 0.223810909194191 1 0.590074717998505 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053816 . . 0 27 hm5C_associated_SNPs_2302 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGGGTT < 41bp 1 0.578271556801496 1 0.476733267307281 experiment 0.843456886397007 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053816 . . 0 25 hm5C_associated_SNPs_2303 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGGGTTC < 41bp 1 0.407880753310829 1 0.720746457576752 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053816 . . 0 24 hm5C_associated_SNPs_2304 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCAAGTGGGAGACCCGGGTTCA < 41bp 1 0.694722310708025 1 0.818739175796509 experiment 0.61055537858395 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053816 . . 0 23 hm5C_associated_SNPs_2305 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053825 + 17053805 17053845 41 CTCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCAAGTGGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.672154719362588 1 0.41332820057869 experiment 0.655690561274825 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053825 chr1:17053816 . . 0 12 hm5C_associated_SNPs_2306 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053826 + 17053806 17053846 41 TCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCAAGTGGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.787906336753253 1 0.759535908699036 experiment 0.424187326493494 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053826 chr1:17053816 . . 0 11 hm5C_associated_SNPs_2307 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053816 17053816 1 + C A rs2419165 17053827 + 17053807 17053847 41 CGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCAAGTGGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.608095894432206 1 0.8169846534729 experiment 0.783808211135588 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053827 chr1:17053816 . . 0 10 hm5C_associated_SNPs_2308 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGAC < 41bp 1 0.792032855281031 1 0.278205335140228 experiment 0.415934289437939 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053818 . . 0 34 hm5C_associated_SNPs_2309 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCC < 41bp 1 0.641614002213955 1 0.418918132781982 experiment 0.71677199557209 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053818 . . 0 32 hm5C_associated_SNPs_2310 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGG < 41bp 1 0.0823614415508173 1 0.180462926626205 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053818 . . 0 30 hm5C_associated_SNPs_2311 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG < 41bp 1 0.206005726278027 1 0.839639663696289 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053818 . . 0 29 hm5C_associated_SNPs_2312 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTT < 41bp 1 0.159331353358313 1 0.289843261241913 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053818 . . 0 27 hm5C_associated_SNPs_2313 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTC < 41bp 1 0.413374060407446 1 0.411403506994247 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053818 . . 0 26 hm5C_associated_SNPs_2314 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCA < 41bp 1 0.645539185717334 1 0.413295030593872 experiment 0.708921628565332 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053818 . . 0 25 hm5C_associated_SNPs_2315 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053825 + 17053805 17053845 41 CTCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.711750545176803 1 0.40058907866478 experiment 0.576498909646395 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053825 chr1:17053818 . . 0 14 hm5C_associated_SNPs_2316 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053826 + 17053806 17053846 41 TCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.796344411736694 1 0.761224091053009 experiment 0.407311176526612 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053826 chr1:17053818 . . 0 13 hm5C_associated_SNPs_2317 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053818 17053818 1 + T C rs5014834 17053827 + 17053807 17053847 41 CGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.658498115872354 1 0.760148644447327 experiment 0.683003768255292 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053827 chr1:17053818 . . 0 12 hm5C_associated_SNPs_2318 0 0 37 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTCGGAGAC < 41bp 1 0.797006790023337 1 0.337899923324585 experiment 0.405986419953326 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053819 . . 0 35 hm5C_associated_SNPs_2319 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTCGGAGACCC < 41bp 1 0.698075286656915 1 0.35766464471817 experiment 0.60384942668617 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053819 . . 0 33 hm5C_associated_SNPs_2320 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGAATTCTCGCCTCCCACGTCGGAGACCCGG < 41bp 1 0.076814186481211 1 0.0678219199180603 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053819 . . 0 31 hm5C_associated_SNPs_2321 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGAATTCTCGCCTCCCACGTCGGAGACCCGGG < 41bp 1 0.198693313626984 1 0.849792957305908 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053819 . . 0 30 hm5C_associated_SNPs_2322 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGAATTCTCGCCTCCCACGTCGGAGACCCGGGTT < 41bp 1 0.184216140643925 1 0.18797641992569 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053819 . . 0 28 hm5C_associated_SNPs_2323 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGAATTCTCGCCTCCCACGTCGGAGACCCGGGTTC < 41bp 1 0.432400775268203 1 0.309444397687912 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053819 . . 0 27 hm5C_associated_SNPs_2324 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCACGTCGGAGACCCGGGTTCA < 41bp 1 0.627261932500706 1 0.24745574593544 experiment 0.745476134998587 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053819 . . 0 26 hm5C_associated_SNPs_2325 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053816 + 17053796 17053836 41 GGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACGTCGGAGACCCGGGTTCAAT < 41bp 1 0.497889079761768 1 0.458627671003342 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053816 chr1:17053819 . . 0 24 hm5C_associated_SNPs_2326 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053825 + 17053805 17053845 41 CTCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGTCGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.699086562756907 1 0.252333283424377 experiment 0.601826874486186 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053825 chr1:17053819 . . 0 15 hm5C_associated_SNPs_2327 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053826 + 17053806 17053846 41 TCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGTCGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.745259584254146 1 0.72724711894989 experiment 0.509480831491709 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053826 chr1:17053819 . . 0 14 hm5C_associated_SNPs_2328 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053827 + 17053807 17053847 41 CGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGTCGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.58488732965142 1 0.827333807945251 experiment 0.830225340697161 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053827 chr1:17053819 . . 0 13 hm5C_associated_SNPs_2329 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053819 17053819 1 + G C rs5016505 17053839 + 17053819 17053859 41 GGGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT CGGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT < 41bp 1 0.263374846943503 1 0.875133037567139 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053839 chr1:17053819 . . 0 1 hm5C_associated_SNPs_2330 0 0 35 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGAGAGAC < 41bp 1 0.755734907616493 1 0.299097120761871 experiment 0.488530184767015 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053820 . . 0 36 hm5C_associated_SNPs_2331 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGAGAGACCC < 41bp 1 0.64662779389739 1 0.607231020927429 experiment 0.706744412205221 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053820 . . 0 34 hm5C_associated_SNPs_2332 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGAATTCTCGCCTCCCACGTGAGAGACCCGG < 41bp 1 0.0675461047225689 1 0.276100963354111 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053820 . . 0 32 hm5C_associated_SNPs_2333 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGAATTCTCGCCTCCCACGTGAGAGACCCGGG < 41bp 1 0.222178825413376 1 0.805610179901123 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053820 . . 0 31 hm5C_associated_SNPs_2334 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGAATTCTCGCCTCCCACGTGAGAGACCCGGGTT < 41bp 1 0.183393996934193 1 0.296599328517914 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053820 . . 0 29 hm5C_associated_SNPs_2335 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGAATTCTCGCCTCCCACGTGAGAGACCCGGGTTC < 41bp 1 0.448710993937974 1 0.348438084125519 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053820 . . 0 28 hm5C_associated_SNPs_2336 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCACGTGAGAGACCCGGGTTCA < 41bp 1 0.730666001600492 1 0.48322519659996 experiment 0.538667996799016 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053820 . . 0 27 hm5C_associated_SNPs_2337 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053816 + 17053796 17053836 41 GGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACGTGAGAGACCCGGGTTCAAT < 41bp 1 0.773247540956488 1 0.610827028751373 experiment 0.453504918087023 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053816 chr1:17053820 . . 0 25 hm5C_associated_SNPs_2338 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053825 + 17053805 17053845 41 CTCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGTGAGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.68056044752797 1 0.213574171066284 experiment 0.638879104944059 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053825 chr1:17053820 . . 0 16 hm5C_associated_SNPs_2339 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053826 + 17053806 17053846 41 TCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGTGAGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.779944651039738 1 0.762234210968018 experiment 0.440110697920525 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053826 chr1:17053820 . . 0 15 hm5C_associated_SNPs_2340 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053827 + 17053807 17053847 41 CGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGTGAGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.55037850218244 1 0.792680382728577 experiment 0.89924299563512 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053827 chr1:17053820 . . 0 14 hm5C_associated_SNPs_2341 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053839 + 17053819 17053859 41 GGGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT GAGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT < 41bp 1 0.259397345385404 1 0.888049364089966 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053839 chr1:17053820 . . 0 2 hm5C_associated_SNPs_2342 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053820 17053820 1 + G A rs531582564 17053840 + 17053820 17053860 41 GGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTT AGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTT < 41bp 1 0.468734954752274 1 0.63255763053894 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053840 chr1:17053820 . . 0 1 hm5C_associated_SNPs_2343 0 0 51 LIN28A POSTAR2 GSE39873,GSM980594 chr1:17053760-17053820
64251 chr1 17053824 17053824 1 + A T rs5016504 17053805 + 17053785 17053825 41 GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGAC GGTGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGTC < 41bp 1 0.76196339007063 1 0.220484793186188 experiment 0.476073219858739 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053805 chr1:17053824 . . 0 40 hm5C_associated_SNPs_2344 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053807 + 17053787 17053827 41 TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCC TGGTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCC < 41bp 1 0.653950862820451 1 0.460547834634781 experiment 0.692098274359097 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053807 chr1:17053824 . . 0 38 hm5C_associated_SNPs_2345 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053809 + 17053789 17053829 41 GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGG GTGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGG < 41bp 1 0.0680773096417441 1 0.153483062982559 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053809 chr1:17053824 . . 0 36 hm5C_associated_SNPs_2346 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053810 + 17053790 17053830 41 TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGG TGCAGTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGGG < 41bp 1 0.229290626267245 1 0.822190046310425 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053810 chr1:17053824 . . 0 35 hm5C_associated_SNPs_2347 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053812 + 17053792 17053832 41 CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTT CAGTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGGGTT < 41bp 1 0.208880025623479 1 0.24141663312912 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053812 chr1:17053824 . . 0 33 hm5C_associated_SNPs_2348 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053813 + 17053793 17053833 41 AGTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTC AGTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGGGTTC < 41bp 1 0.499428734550583 1 0.559600710868835 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053813 chr1:17053824 . . 0 32 hm5C_associated_SNPs_2349 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053814 + 17053794 17053834 41 GTGGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGGGTTCA < 41bp 1 0.647158937590491 1 0.440376400947571 experiment 0.705682124819018 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053814 chr1:17053824 . . 0 31 hm5C_associated_SNPs_2350 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053816 + 17053796 17053836 41 GGTAGAATTCTCGCCTCCCACGTGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACGTGGGAGTCCCGGGTTCAAT < 41bp 1 0.689590087236293 1 0.724956452846527 experiment 0.620819825527414 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053816 chr1:17053824 . . 0 29 hm5C_associated_SNPs_2351 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053825 + 17053805 17053845 41 CTCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGTGGGAGTCCCGGGTTCAATTCCCGGCCA < 41bp 1 0.74523856657477 1 0.33108115196228 experiment 0.50952286685046 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053825 chr1:17053824 . . 0 20 hm5C_associated_SNPs_2352 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053826 + 17053806 17053846 41 TCGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGTGGGAGTCCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.757637782599773 1 0.638127386569977 experiment 0.484724434800455 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053826 chr1:17053824 . . 0 19 hm5C_associated_SNPs_2353 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053827 + 17053807 17053847 41 CGCCTCCCACGTGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGTGGGAGTCCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.630815732511354 1 0.783005714416504 experiment 0.738368534977291 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053827 chr1:17053824 . . 0 18 hm5C_associated_SNPs_2354 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053839 + 17053819 17053859 41 GGGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT GGGAGTCCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACT < 41bp 1 0.271122832533683 1 0.867138504981995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053839 chr1:17053824 . . 0 6 hm5C_associated_SNPs_2355 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053840 + 17053820 17053860 41 GGAGACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTT GGAGTCCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTT < 41bp 1 0.435345278391341 1 0.57285463809967 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053840 chr1:17053824 . . 0 5 hm5C_associated_SNPs_2356 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17053824 17053824 1 + A T rs5016504 17053843 + 17053823 17053863 41 GACCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTTCTT GTCCCGGGTTCAATTCCCGGCCAATGCAGCAGGTACTTCTT < 41bp 1 0.0591555203507032 1 0.17504221200943 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ESPNP;FAM231C ENSG00000268869;ENSG00000268991 intergenic Human other chr1:17053843 chr1:17053824 . . 0 2 hm5C_associated_SNPs_2357 0 0 49 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17053760-17053840
64251 chr1 17188438 17188438 1 + A C rs546189230 17188446 + 17188426 17188466 41 TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG TTCAGTGGTAGACTTCTCGCCTCCCACGCGGGAGACCCGGG < 41bp 1 0.10700528125771 1 0.789346575737 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188446 chr1:17188438 . . 0 13 hm5C_associated_SNPs_2358 0 0 2 XPO5 POSTAR2 ENCODE chr1:17188426-17188469
64251 chr1 17188438 17188438 1 + A C rs546189230 17188452 + 17188432 17188472 41 GGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT GGTAGACTTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT < 41bp 1 0.67084772941474 1 0.756528377532959 experiment 0.65830454117052 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188452 chr1:17188438 . . 0 7 hm5C_associated_SNPs_2359 0 0 2 XPO5 POSTAR2 ENCODE chr1:17188426-17188469
64251 chr1 17188438 17188438 1 + A C rs546189230 17188454 + 17188434 17188474 41 TAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAATTC TAGACTTCTCGCCTCCCACGCGGGAGACCCGGGTTCAATTC < 41bp 1 0.782970905015069 1 0.934903025627136 experiment 0.434058189969861 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188454 chr1:17188438 . . 0 5 hm5C_associated_SNPs_2360 0 0 2 XPO5 POSTAR2 ENCODE chr1:17188426-17188469
64251 chr1 17188446 17188446 1 + C A rs552484036 17188452 + 17188432 17188472 41 GGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCATCCCACGCGGGAGACCCGGGTTCAAT < 41bp 1 0.703148264854253 1 0.740342319011688 experiment 0.593703470291495 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188452 chr1:17188446 . . 0 15 hm5C_associated_SNPs_2361 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188446 17188446 1 + C A rs552484036 17188454 + 17188434 17188474 41 TAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAATTC TAGAATTCTCGCATCCCACGCGGGAGACCCGGGTTCAATTC < 41bp 1 0.76288627785651 1 0.891056418418884 experiment 0.47422744428698 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188454 chr1:17188446 . . 0 13 hm5C_associated_SNPs_2362 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188446 17188446 1 + C A rs552484036 17188461 + 17188441 17188481 41 CTCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCATCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.587605835770665 1 0.229719221591949 experiment 0.82478832845867 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188461 chr1:17188446 . . 0 6 hm5C_associated_SNPs_2363 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188446 17188446 1 + C A rs552484036 17188462 + 17188442 17188482 41 TCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCATCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.634739885000272 1 0.730795383453369 experiment 0.730520229999456 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188462 chr1:17188446 . . 0 5 hm5C_associated_SNPs_2364 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188446 17188446 1 + C A rs552484036 17188463 + 17188443 17188483 41 CGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCATCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.480607831938827 1 0.753916382789612 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188463 chr1:17188446 . . 0 4 hm5C_associated_SNPs_2365 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188446 + 17188426 17188466 41 TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG TTCAGTGGTAGAATTCTCGCCTCCCACACGGGAGACCCGGG < 41bp 1 0.0866209833151237 1 0.875242471694946 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188446 chr1:17188453 . . 0 28 hm5C_associated_SNPs_2366 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188452 + 17188432 17188472 41 GGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACACGGGAGACCCGGGTTCAAT < 41bp 1 0.664238659060758 1 0.698079288005829 experiment 0.671522681878484 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188452 chr1:17188453 . . 0 22 hm5C_associated_SNPs_2367 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188461 + 17188441 17188481 41 CTCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACACGGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.485116601028788 1 0.170010149478912 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188461 chr1:17188453 . . 0 13 hm5C_associated_SNPs_2368 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188462 + 17188442 17188482 41 TCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACACGGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.556283655351425 1 0.656667351722717 experiment 0.88743268929715 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188462 chr1:17188453 . . 0 12 hm5C_associated_SNPs_2369 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188463 + 17188443 17188483 41 CGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACACGGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.472948501400074 1 0.52195942401886 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188463 chr1:17188453 . . 0 11 hm5C_associated_SNPs_2370 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188453 17188453 1 + G A rs561928315 17188469 + 17188449 17188489 41 CCACGCGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAA CCACACGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAA < 41bp 1 0.0813458521331519 1 0.0920045971870422 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188469 chr1:17188453 . . 0 5 hm5C_associated_SNPs_2371 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188446 + 17188426 17188466 41 TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG TTCAGTGGTAGAATTCTCGCCTCCCACGAGGGAGACCCGGG < 41bp 1 0.094786235951599 1 0.541738092899323 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188446 chr1:17188454 . . 0 29 hm5C_associated_SNPs_2372 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188452 + 17188432 17188472 41 GGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACGAGGGAGACCCGGGTTCAAT < 41bp 1 0.674745001558779 1 0.881217777729034 experiment 0.650509996882441 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188452 chr1:17188454 . . 0 23 hm5C_associated_SNPs_2373 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188461 + 17188441 17188481 41 CTCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGAGGGAGACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.54105095064019 1 0.462991654872894 experiment 0.917898098719619 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188461 chr1:17188454 . . 0 14 hm5C_associated_SNPs_2374 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188462 + 17188442 17188482 41 TCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGAGGGAGACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.585408456100549 1 0.795004844665527 experiment 0.829183087798901 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188462 chr1:17188454 . . 0 13 hm5C_associated_SNPs_2375 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188463 + 17188443 17188483 41 CGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGAGGGAGACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.46606468022632 1 0.811122417449951 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188463 chr1:17188454 . . 0 12 hm5C_associated_SNPs_2376 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188469 + 17188449 17188489 41 CCACGCGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAA CCACGAGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAA < 41bp 1 0.0932155667213547 1 0.063977986574173 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188469 chr1:17188454 . . 0 6 hm5C_associated_SNPs_2377 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188454 17188454 1 + C A rs530559305 17188474 + 17188454 17188494 41 CGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTC AGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTC < 41bp 1 0.312970761829997 1 0.886191427707672 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188474 chr1:17188454 . . 0 1 hm5C_associated_SNPs_2378 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188446 + 17188426 17188466 41 TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGG TTCAGTGGTAGAATTCTCGCCTCCCACGCGGGAAACCCGGG < 41bp 1 0.0849813865291165 1 0.815523982048035 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188446 chr1:17188459 . . 0 34 hm5C_associated_SNPs_2379 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188452 + 17188432 17188472 41 GGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAAT GGTAGAATTCTCGCCTCCCACGCGGGAAACCCGGGTTCAAT < 41bp 1 0.700835402589521 1 0.758637189865112 experiment 0.598329194820958 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188452 chr1:17188459 . . 0 28 hm5C_associated_SNPs_2380 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188454 + 17188434 17188474 41 TAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCAATTC TAGAATTCTCGCCTCCCACGCGGGAAACCCGGGTTCAATTC < 41bp 1 0.743745141439337 1 0.904305815696716 experiment 0.512509717121327 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188454 chr1:17188459 . . 0 26 hm5C_associated_SNPs_2381 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188461 + 17188441 17188481 41 CTCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCA CTCGCCTCCCACGCGGGAAACCCGGGTTCAATTCCCGGCCA < 41bp 1 0.637053132732538 1 0.265027284622192 experiment 0.725893734534924 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188461 chr1:17188459 . . 0 19 hm5C_associated_SNPs_2382 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188462 + 17188442 17188482 41 TCGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAA TCGCCTCCCACGCGGGAAACCCGGGTTCAATTCCCGGCCAA < 41bp 1 0.702310179406457 1 0.823166847229004 experiment 0.595379641187087 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188462 chr1:17188459 . . 0 18 hm5C_associated_SNPs_2383 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188463 + 17188443 17188483 41 CGCCTCCCACGCGGGAGACCCGGGTTCAATTCCCGGCCAAT CGCCTCCCACGCGGGAAACCCGGGTTCAATTCCCGGCCAAT < 41bp 1 0.546085436074043 1 0.727984249591827 experiment 0.907829127851913 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188463 chr1:17188459 . . 0 17 hm5C_associated_SNPs_2384 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188469 + 17188449 17188489 41 CCACGCGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAA CCACGCGGGAAACCCGGGTTCAATTCCCGGCCAATGCAAAA < 41bp 1 0.0772943642251457 1 0.0872287154197693 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188469 chr1:17188459 . . 0 11 hm5C_associated_SNPs_2385 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188474 + 17188454 17188494 41 CGGGAGACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTC CGGGAAACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTC < 41bp 1 0.291532300306581 1 0.862794876098633 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188474 chr1:17188459 . . 0 6 hm5C_associated_SNPs_2386 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188476 + 17188456 17188496 41 GGAGACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTCTT GGAAACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTCTT < 41bp 1 0.294394440795175 1 0.546615779399872 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188476 chr1:17188459 . . 0 4 hm5C_associated_SNPs_2387 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17188459 17188459 1 + G A rs546934057 17188479 + 17188459 17188499 41 GACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTCTTTTT AACCCGGGTTCAATTCCCGGCCAATGCAAAAGGGTCTTTTT < 41bp 1 0.0265375950800509 1 0.104426711797714 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188479 chr1:17188459 . . 0 1 hm5C_associated_SNPs_2388 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr1 17199083 17199083 1 + G C rs558994459 17199089 + 17199069 17199109 41 TCCTGTGTGTCCCTGGTGGTCTAGTGGCTAGGATTCGGCGC TCCTGTGTGTCCCTCGTGGTCTAGTGGCTAGGATTCGGCGC < 41bp 1 0.568433430504912 1 0.693278908729553 experiment 0.863133138990177 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199089 chr1:17199083 . . 0 15 hm5C_associated_SNPs_2391 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199107 + 17199087 17199127 41 GTCTAGTGGCTAGGATTCGGCGCTTTCACCGCCGCGGCCCG GTCTAGTGGCTAGGATTCGGCGCTTTCACCGCCGCGACCCG < 41bp 1 0.212328503113271 1 0.204558223485947 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199107 chr1:17199123 . . 0 37 hm5C_associated_SNPs_2392 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199109 + 17199089 17199129 41 CTAGTGGCTAGGATTCGGCGCTTTCACCGCCGCGGCCCGGG CTAGTGGCTAGGATTCGGCGCTTTCACCGCCGCGACCCGGG < 41bp 1 0.0147965285555704 1 0.0471420586109161 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199109 chr1:17199123 . . 0 35 hm5C_associated_SNPs_2393 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199113 + 17199093 17199133 41 TGGCTAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCG TGGCTAGGATTCGGCGCTTTCACCGCCGCGACCCGGGTTCG < 41bp 1 0.675110281305181 1 0.284040004014969 experiment 0.649779437389637 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199113 chr1:17199123 . . 0 31 hm5C_associated_SNPs_2394 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199115 + 17199095 17199135 41 GCTAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGAT GCTAGGATTCGGCGCTTTCACCGCCGCGACCCGGGTTCGAT < 41bp 1 0.284799797532175 1 0.392137587070465 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199115 chr1:17199123 . . 0 29 hm5C_associated_SNPs_2395 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199116 + 17199096 17199136 41 CTAGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATT CTAGGATTCGGCGCTTTCACCGCCGCGACCCGGGTTCGATT < 41bp 1 0.462357805600205 1 0.85518890619278 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199116 chr1:17199123 . . 0 28 hm5C_associated_SNPs_2396 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199118 + 17199098 17199138 41 AGGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTTTCACCGCCGCGACCCGGGTTCGATTCC < 41bp 1 0.251676072611449 1 0.851165413856506 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199118 chr1:17199123 . . 0 26 hm5C_associated_SNPs_2397 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199119 + 17199099 17199139 41 GGATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTTTCACCGCCGCGACCCGGGTTCGATTCCC < 41bp 1 0.639098651107743 1 0.895704984664917 experiment 0.721802697784514 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199119 chr1:17199123 . . 0 25 hm5C_associated_SNPs_2398 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199121 + 17199101 17199141 41 ATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTTTCACCGCCGCGACCCGGGTTCGATTCCCGG < 41bp 1 0.145750182581336 1 0.34496608376503 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199121 chr1:17199123 . . 0 23 hm5C_associated_SNPs_2399 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199124 + 17199104 17199144 41 CGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCA CGGCGCTTTCACCGCCGCGACCCGGGTTCGATTCCCGGCCA < 41bp 1 0.554917305670725 1 0.435720473527908 experiment 0.89016538865855 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199124 chr1:17199123 . . 0 20 hm5C_associated_SNPs_2400 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199125 + 17199105 17199145 41 GGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAG GGCGCTTTCACCGCCGCGACCCGGGTTCGATTCCCGGCCAG < 41bp 1 0.68634584558986 1 0.652141153812408 experiment 0.627308308820281 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199125 chr1:17199123 . . 0 19 hm5C_associated_SNPs_2401 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199126 + 17199106 17199146 41 GCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAGG GCGCTTTCACCGCCGCGACCCGGGTTCGATTCCCGGCCAGG < 41bp 1 0.499463125798377 1 0.794880986213684 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199126 chr1:17199123 . . 0 18 hm5C_associated_SNPs_2402 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199132 + 17199112 17199152 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTG TCACCGCCGCGACCCGGGTTCGATTCCCGGCCAGGGAATTG < 41bp 1 0.128728030055114 1 0.0154149830341339 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199132 chr1:17199123 . . 0 12 hm5C_associated_SNPs_2403 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199137 + 17199117 17199157 41 GCCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTA GCCGCGACCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTA < 41bp 1 0.4667979969309 1 0.765262544155121 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199137 chr1:17199123 . . 0 7 hm5C_associated_SNPs_2404 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199138 + 17199118 17199158 41 CCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTAC CCGCGACCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTAC < 41bp 1 0.267426929544101 1 0.494120717048645 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199138 chr1:17199123 . . 0 6 hm5C_associated_SNPs_2405 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199139 + 17199119 17199159 41 CGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACA CGCGACCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACA < 41bp 1 0.314768170182341 1 0.155617505311966 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199139 chr1:17199123 . . 0 5 hm5C_associated_SNPs_2406 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199123 17199123 1 + G A rs12047619 17199143 + 17199123 17199163 41 GCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACACTGG ACCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACACTGG < 41bp 1 0.573884920011246 1 0.527373909950256 experiment 0.852230159977508 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199143 chr1:17199123 . . 0 1 hm5C_associated_SNPs_2407 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17199077-17199149
64251 chr1 17199141 17199141 1 + G A rs563531853 17199121 + 17199101 17199141 41 ATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGA < 41bp 1 0.225379294208998 1 0.375077217817307 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199121 chr1:17199141 . . 0 41 hm5C_associated_SNPs_2408 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199124 + 17199104 17199144 41 CGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCA CGGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGACCA < 41bp 1 0.536337660632911 1 0.387405425310135 experiment 0.927324678734178 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199124 chr1:17199141 . . 0 38 hm5C_associated_SNPs_2409 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199125 + 17199105 17199145 41 GGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAG GGCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGACCAG < 41bp 1 0.574202808270216 1 0.478431761264801 experiment 0.851594383459567 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199125 chr1:17199141 . . 0 37 hm5C_associated_SNPs_2410 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199126 + 17199106 17199146 41 GCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAGG GCGCTTTCACCGCCGCGGCCCGGGTTCGATTCCCGACCAGG < 41bp 1 0.394939088160567 1 0.543634057044983 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199126 chr1:17199141 . . 0 36 hm5C_associated_SNPs_2411 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199132 + 17199112 17199152 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTG TCACCGCCGCGGCCCGGGTTCGATTCCCGACCAGGGAATTG < 41bp 1 0.150108398192384 1 0.0449329614639282 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199132 chr1:17199141 . . 0 30 hm5C_associated_SNPs_2412 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199137 + 17199117 17199157 41 GCCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTA GCCGCGGCCCGGGTTCGATTCCCGACCAGGGAATTGTTTTA < 41bp 1 0.517751436618736 1 0.802772521972656 experiment 0.964497126762528 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199137 chr1:17199141 . . 0 25 hm5C_associated_SNPs_2413 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199138 + 17199118 17199158 41 CCGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTAC CCGCGGCCCGGGTTCGATTCCCGACCAGGGAATTGTTTTAC < 41bp 1 0.121957900475333 1 0.368544161319733 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199138 chr1:17199141 . . 0 24 hm5C_associated_SNPs_2414 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199139 + 17199119 17199159 41 CGCGGCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACA CGCGGCCCGGGTTCGATTCCCGACCAGGGAATTGTTTTACA < 41bp 1 0.215191316809816 1 0.185645788908005 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199139 chr1:17199141 . . 0 23 hm5C_associated_SNPs_2415 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17199141 17199141 1 + G A rs563531853 17199143 + 17199123 17199163 41 GCCCGGGTTCGATTCCCGGCCAGGGAATTGTTTTACACTGG GCCCGGGTTCGATTCCCGACCAGGGAATTGTTTTACACTGG < 41bp 1 0.66811938429446 1 0.746017694473267 experiment 0.663761231411079 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LOC440570 ENSG00000228549 ncRNA_exonic Human lincRNA chr1:17199143 chr1:17199141 . . 0 19 hm5C_associated_SNPs_2416 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:17199129-17199152
64251 chr1 17216212 17216212 1 + C A rs571173747 17216228 + 17216208 17216248 41 TAACCGAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTT TAACAGAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTT < 41bp 1 0.229060931121006 1 0.421404778957367 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216228 chr1:17216212 . . 0 5 hm5C_associated_SNPs_2417 0 0 44 SSB POSTAR2 GSE95683,GSM2521600 chr1:17216160-17216220
64251 chr1 17216236 17216236 1 + C A rs377537786 17216228 + 17216208 17216248 41 TAACCGAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTT TAACCGAAAGATTGGTGGTTCGAGCCCAACCAGGGACGCTT < 41bp 1 0.213230093002667 1 0.432523161172867 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216228 chr1:17216236 . . 0 29 hm5C_associated_SNPs_2418 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17216236 17216236 1 + C A rs377537786 17216233 + 17216213 17216253 41 GAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTTATTGG GAAAGATTGGTGGTTCGAGCCCAACCAGGGACGCTTATTGG < 41bp 1 0.0310970457043247 1 0.110432118177414 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216233 chr1:17216236 . . 0 24 hm5C_associated_SNPs_2419 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17216240 17216240 1 + G C rs192795893 17216228 + 17216208 17216248 41 TAACCGAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTT TAACCGAAAGATTGGTGGTTCGAGCCCACCCACGGACGCTT < 41bp 1 0.233317387580496 1 0.33130931854248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216228 chr1:17216240 . . 0 33 hm5C_associated_SNPs_2420 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17216240 17216240 1 + G C rs192795893 17216233 + 17216213 17216253 41 GAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTTATTGG GAAAGATTGGTGGTTCGAGCCCACCCACGGACGCTTATTGG < 41bp 1 0.0353389440176956 1 0.119972229003906 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216233 chr1:17216240 . . 0 28 hm5C_associated_SNPs_2421 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17216244 17216244 1 + C T rs71644016 17216228 + 17216208 17216248 41 TAACCGAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTT TAACCGAAAGATTGGTGGTTCGAGCCCACCCAGGGATGCTT < 41bp 1 0.193484041907698 1 0.384996384382248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216228 chr1:17216244 . . 0 37 hm5C_associated_SNPs_2422 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17216244 17216244 1 + C T rs71644016 17216233 + 17216213 17216253 41 GAAAGATTGGTGGTTCGAGCCCACCCAGGGACGCTTATTGG GAAAGATTGGTGGTTCGAGCCCACCCAGGGATGCTTATTGG < 41bp 1 0.0431240445443278 1 0.0890945792198181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105376805 ENSG00000238142;ENSG00000235241 upstream;downstream Human other chr1:17216233 chr1:17216244 . . 0 32 hm5C_associated_SNPs_2423 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr1:17216188-17216246
64251 chr1 17949640 17949640 1 + C T rs560500744 17949656 + 17949636 17949676 41 CCACCGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT CCACTGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT < 41bp 1 0.123884953931909 1 0.0298303365707397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17949656 chr1:17949640 synonymous SNV . 0 5 hm5C_associated_SNPs_2425 0 0 1 PPIG POSTAR2 ENCODE chr1:17949591-17949668
64251 chr1 17949661 17949661 1 + C T rs142153324 17949656 + 17949636 17949676 41 CCACCGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT CCACCGAGAAGATCGGGGACCTCTTTGTGGCCTCGGTAAGT < 41bp 1 0.161651370068853 1 0.0501843988895416 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17949656 chr1:17949661 synonymous SNV . 0 26 hm5C_associated_SNPs_2426 0 0 3 GRWD1 POSTAR2 ENCODE chr1:17949649-17949670
64251 chr1 19586496 19586496 1 + G A rs183580037 19586515 + 19586495 19586535 41 CGATCTACCCACCTTGGCCTCCCAAAGTGCTGGGATTATAG CAATCTACCCACCTTGGCCTCCCAAAGTGCTGGGATTATAG < 41bp 1 0.440052364542119 1 0.0626196265220642 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19586515 chr1:19586496 . . 0 2 hm5C_associated_SNPs_2428 0 0 1 RBM27 POSTAR2 ENCODE chr1:19586423-19586515
64251 chr1 19586496 19586496 1 + G A rs183580037 19586516 + 19586496 19586536 41 GATCTACCCACCTTGGCCTCCCAAAGTGCTGGGATTATAGG AATCTACCCACCTTGGCCTCCCAAAGTGCTGGGATTATAGG < 41bp 1 0.460072517630191 1 0.136659234762192 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19586516 chr1:19586496 . . 0 1 hm5C_associated_SNPs_2429 0 0 1 RBM27 POSTAR2 ENCODE chr1:19586423-19586515
64251 chr1 19934898 19934898 1 + C G rs149838191 19934893 + 19934873 19934913 41 GTATCATTGCCCTACACATCCAACTCCGGGCCACAGGAGGA GTATCATTGCCCTACACATCCAACTGCGGGCCACAGGAGGA < 41bp 1 0.528261757358474 1 0.124638468027115 experiment 0.943476485283053 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19934893 chr1:19934898 . . 0 26 hm5C_associated_SNPs_2430 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:19934880-19934920
64251 chr1 19934899 19934899 1 + C T rs180924547 19934893 + 19934873 19934913 41 GTATCATTGCCCTACACATCCAACTCCGGGCCACAGGAGGA GTATCATTGCCCTACACATCCAACTCTGGGCCACAGGAGGA < 41bp 1 0.465608803638187 1 0.0744744837284088 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19934893 chr1:19934899 . . 0 27 hm5C_associated_SNPs_2431 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:19934880-19934920
64251 chr1 19934900 19934900 1 + G A rs61740466 19934893 + 19934873 19934913 41 GTATCATTGCCCTACACATCCAACTCCGGGCCACAGGAGGA GTATCATTGCCCTACACATCCAACTCCAGGCCACAGGAGGA < 41bp 1 0.377637985995004 1 0.0838013887405396 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19934893 chr1:19934900 . . 0 28 hm5C_associated_SNPs_2432 0 1 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:19934880-19934920
64251 chr1 19935005 19935005 1 + C G rs377011513 19935013 + 19934993 19935033 41 TTGAGGACGTCACCCCCATCCCCTCTGACAGCACTCTCAGG TTGAGGACGTCAGCCCCATCCCCTCTGACAGCACTCTCAGG < 41bp 1 0.112304755944313 1 0.211539268493652 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19935013 chr1:19935005 . . 0 13 hm5C_associated_SNPs_2433 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:19934989-19935010
64251 chr1 19935005 19935005 1 + C G rs377011513 19935014 + 19934994 19935034 41 TGAGGACGTCACCCCCATCCCCTCTGACAGCACTCTCAGGA TGAGGACGTCAGCCCCATCCCCTCTGACAGCACTCTCAGGA < 41bp 1 0.157616268018664 1 0.198295503854752 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19935014 chr1:19935005 . . 0 12 hm5C_associated_SNPs_2434 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:19934989-19935010
64251 chr1 19935005 19935005 1 + C G rs377011513 19935015 + 19934995 19935035 41 GAGGACGTCACCCCCATCCCCTCTGACAGCACTCTCAGGAA GAGGACGTCAGCCCCATCCCCTCTGACAGCACTCTCAGGAA < 41bp 1 0.453748679033716 1 0.388395190238953 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19935015 chr1:19935005 . . 0 11 hm5C_associated_SNPs_2435 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:19934989-19935010
64251 chr1 19935005 19935005 1 + C G rs377011513 19935017 + 19934997 19935037 41 GGACGTCACCCCCATCCCCTCTGACAGCACTCTCAGGAAGG GGACGTCAGCCCCATCCCCTCTGACAGCACTCTCAGGAAGG < 41bp 1 0.295070847568938 1 0.113270282745361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19935017 chr1:19935005 . . 0 9 hm5C_associated_SNPs_2436 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:19934989-19935010
64251 chr1 19935005 19935005 1 + C G rs377011513 19935021 + 19935001 19935041 41 GTCACCCCCATCCCCTCTGACAGCACTCTCAGGAAGGGGGT GTCAGCCCCATCCCCTCTGACAGCACTCTCAGGAAGGGGGT < 41bp 1 0.67286270667395 1 0.270526051521301 experiment 0.654274586652101 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS14P3 ENSG00000226396 ncRNA_exonic Human processed_pseudogene chr1:19935021 chr1:19935005 . . 0 5 hm5C_associated_SNPs_2437 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:19934989-19935010
64251 chr1 23240134 23240134 1 + T C rs111422315 23240154 + 23240134 23240174 41 TGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCA CGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCA < 41bp 1 0.251646955125163 1 0.153185993432999 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPHB2 ENSG00000133216 UTR3 Human protein_coding chr1:23240154 chr1:23240134 . . 0 1 hm5C_associated_SNPs_2570 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:23240121-23240145
64251 chr1 24018307 24018307 1 + C T rs202059289 24018298 + 24018278 24018318 41 GGCCGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGC GGCCGGAAGCTCCGCTTTCTCTTCCTGCTTTCCATCATGGC < 41bp 1 0.401421385473032 1 0.709935426712036 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL11 ENSG00000142676 UTR5 Human protein_coding chr1:24018298 chr1:24018307 . . 0 30 hm5C_associated_SNPs_2572 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24018307 24018307 1 + C T rs202059289 24018301 + 24018281 24018321 41 CGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGT CGGAAGCTCCGCTTTCTCTTCCTGCTTTCCATCATGGCGGT < 41bp 1 0.355608337921516 1 0.384294778108597 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL11 ENSG00000142676 UTR5 Human protein_coding chr1:24018301 chr1:24018307 . . 0 27 hm5C_associated_SNPs_2573 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24018307 24018307 1 + C T rs202059289 24018302 + 24018282 24018322 41 GGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGTG GGAAGCTCCGCTTTCTCTTCCTGCTTTCCATCATGGCGGTG < 41bp 1 0.481865606035982 1 0.120418071746826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 UTR5 Human protein_coding chr1:24018302 chr1:24018307 . . 0 26 hm5C_associated_SNPs_2574 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24019194 24019194 1 + G A rs199772693 24019185 + 24019165 24019205 41 TGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAA TGTGTTGGGGAGAGTGGAGACAGACTGACACGAGCAGCCAA < 41bp 1 0.790692798623256 1 0.279988378286362 experiment 0.418614402753489 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24019185 chr1:24019194 synonymous SNV . 0 30 hm5C_associated_SNPs_2575 1 0 55 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24019099-24019199
64251 chr1 24020352 24020352 1 + C T rs562572818 24020369 + 24020349 24020389 41 CCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGG CCATTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGG < 41bp 1 0.127432758184907 1 0.422713965177536 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020369 chr1:24020352 synonymous SNV . 0 4 hm5C_associated_SNPs_2576 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24020280-24020360
64251 chr1 24020352 24020352 1 + C T rs562572818 24020370 + 24020350 24020390 41 CACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGA CATTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGA < 41bp 1 0.625269027220879 1 0.363244444131851 experiment 0.749461945558243 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020370 chr1:24020352 synonymous SNV . 0 3 hm5C_associated_SNPs_2577 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24020280-24020360
64251 chr1 24114473 24114473 1 + G A rs117386588 24114482 + 24114462 24114502 41 CTTAAGCTTGGGGAGAAGGTCTTTTCCACTGCCTAGCTAAG CTTAAGCTTGGAGAGAAGGTCTTTTCCACTGCCTAGCTAAG < 41bp 1 0.165406952132803 1 0.0183172225952148 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PITHD1 ENSG00000057757 UTR3 Human protein_coding chr1:24114482 chr1:24114473 . . 0 12 hm5C_associated_SNPs_2578 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:24114419-24114477
64251 chr1 24114480 24114480 1 + G A rs368216872 24114482 + 24114462 24114502 41 CTTAAGCTTGGGGAGAAGGTCTTTTCCACTGCCTAGCTAAG CTTAAGCTTGGGGAGAAGATCTTTTCCACTGCCTAGCTAAG < 41bp 1 0.218657969828496 1 0.0280488431453705 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PITHD1 ENSG00000057757 UTR3 Human protein_coding chr1:24114482 chr1:24114480 . . 0 19 hm5C_associated_SNPs_2579 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24114432-24114655
64251 chr1 24121411 24121411 1 + C G rs565797797 24121405 + 24121385 24121425 41 TCCTTCCTGGCCTTAGCCACCTGGCTCTGTCTGCAGCAGGG TCCTTCCTGGCCTTAGCCACCTGGCTGTGTCTGCAGCAGGG < 41bp 1 0.557690553119808 1 0.180792599916458 experiment 0.884618893760384 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LYPLA2 ENSG00000011009 UTR3 Human protein_coding chr1:24121405 chr1:24121411 . . 0 27 hm5C_associated_SNPs_2580 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:24121387-24121434
64251 chr1 24121411 24121411 1 + C G rs565797797 24121409 + 24121389 24121429 41 TCCTGGCCTTAGCCACCTGGCTCTGTCTGCAGCAGGGGCAG TCCTGGCCTTAGCCACCTGGCTGTGTCTGCAGCAGGGGCAG < 41bp 1 0.649539110853503 1 0.273451656103134 experiment 0.700921778292994 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LYPLA2 ENSG00000011009 UTR3 Human protein_coding chr1:24121409 chr1:24121411 . . 0 23 hm5C_associated_SNPs_2581 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:24121387-24121434
64251 chr1 24782710 24782710 1 + C T rs117938741 24782707 + 24782687 24782727 41 GGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTT GGGAACCTGCAGCTTGACTACCCTATCTTCTACGTGATGTT < 41bp 1 0.224180170676473 1 0.0536659061908722 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24782707 chr1:24782710 synonymous SNV . 0 24 hm5C_associated_SNPs_2583 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:24782685-24782716
64251 chr1 24796327 24796327 1 + G A rs41268767 24796319 + 24796299 24796339 41 AAACGAAACTTGGTTTTGGTCCTGTGAGGACTACTTGTTTG AAACGAAACTTGGTTTTGGTCCTGTGAGAACTACTTGTTTG < 41bp 1 0.142749169605779 1 0.078559398651123 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NIPAL3 ENSG00000001461 UTR3 Human protein_coding chr1:24796319 chr1:24796327 . . 0 29 hm5C_associated_SNPs_2584 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr1:24796327-24796358
64251 chr1 24996669 24996669 1 + G A rs149380642 24996652 + 24996632 24996672 41 GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGT GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCAGGT < 41bp 1 0.189915150624096 1 0.0336529314517975 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996652 chr1:24996669 nonsynonymous SNV 0.928 2 38 hm5C_associated_SNPs_2585 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996669 24996669 1 + G A rs149380642 24996653 + 24996633 24996673 41 TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTC TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCAGGTC < 41bp 1 0.766897553360305 1 0.214116185903549 experiment 0.466204893279391 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996653 chr1:24996669 nonsynonymous SNV 0.928 2 37 hm5C_associated_SNPs_2586 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996669 24996669 1 + G A rs149380642 24996673 + 24996653 24996693 41 CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA CTCCCGATCTGTCTCCAGGTCTCCTGAGCCAGCAGCTAAAA < 41bp 1 0.601506507103311 1 0.0610335469245911 experiment 0.796986985793378 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996673 chr1:24996669 nonsynonymous SNV 0.928 2 17 hm5C_associated_SNPs_2587 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996669 24996669 1 + G A rs149380642 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CCGATCTGTCTCCAGGTCTCCTGAGCCAGCAGCTAAAAAGC < 41bp 1 0.569464261559458 1 0.231839954853058 experiment 0.861071476881084 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996669 nonsynonymous SNV 0.928 2 14 hm5C_associated_SNPs_2588 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996669 24996669 1 + G A rs149380642 24996681 + 24996661 24996701 41 CTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA CTGTCTCCAGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA < 41bp 1 0.209712126996112 1 0.531815648078918 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996681 chr1:24996669 nonsynonymous SNV 0.928 2 9 hm5C_associated_SNPs_2589 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996669 24996669 1 + G A rs149380642 24996688 + 24996668 24996708 41 CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC CAGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC < 41bp 1 0.617960239356578 1 0.60322368144989 experiment 0.764079521286844 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996688 chr1:24996669 nonsynonymous SNV 0.928 2 2 hm5C_associated_SNPs_2590 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996724 24996724 1 + C G rs200488866 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTGT < 41bp 1 0.0528825908733647 1 0.0174388289451599 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996724 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_2591 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996724 24996724 1 + C G rs200488866 24996709 + 24996689 24996729 41 TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTGTCAGT < 41bp 1 0.0546879519326668 1 0.055995911359787 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996709 chr1:24996724 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_2592 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 26109126 26109126 1 + C T rs150201998 26109121 + 26109101 26109141 41 AAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACC AAGCCGGTTTCTCTGGGATCCAAGATGTGTACAGTAGCACC < 41bp 1 0.670461350355968 1 0.804724454879761 experiment 0.659077299288064 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAN1C1 ENSG00000117643 CDS Human protein_coding chr1:26109121 chr1:26109126 synonymous SNV 0.698 0 26 hm5C_associated_SNPs_2596 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26109122-26109140
64251 chr1 26136282 26136282 1 + C T rs147587542 26136269 + 26136249 26136289 41 CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCC CATCATCCTCTCCAAAGACGCCACCCACGTCCGTGACTTCC < 41bp 1 0.0411652053269671 1 0.088612824678421 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136269 chr1:26136282 synonymous SNV . 0 34 hm5C_associated_SNPs_2598 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136282 26136282 1 + C T rs147587542 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGACGCCACCCACGTCCGTGACTTCCG < 41bp 1 0.126922100899751 1 0.0567625761032104 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136282 synonymous SNV . 0 33 hm5C_associated_SNPs_2599 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136282 26136282 1 + C T rs147587542 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGACGCCACCCACGTCCGTGACTTCCGGCT < 41bp 1 0.0966846016824895 1 0.0679886937141418 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136282 synonymous SNV . 0 30 hm5C_associated_SNPs_2600 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136282 26136282 1 + C T rs147587542 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGACGCCACCCACGTCCGTGACTTCCGGCTC < 41bp 1 0.509266004932944 1 0.080597460269928 experiment 0.981467990134112 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136282 synonymous SNV . 0 29 hm5C_associated_SNPs_2601 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26142151 26142151 1 + C A rs183272965 26142138 + 26142118 26142158 41 TCTCATCCACCTTTGAAGACCCGTCCACGGCCACCTACATG TCTCATCCACCTTTGAAGACCCGTCCACGGCCAACTACATG < 41bp 1 0.0222084286634438 1 0.0885903537273407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26142138 chr1:26142151 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_2602 1 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:26142129-26142153
64251 chr1 26142422 26142422 1 + G C rs527610991 26142417 + 26142397 26142437 41 GGCTGACTGGGCAGAGGAACCTCTAGCTCTGACTGTCACTC GGCTGACTGGGCAGAGGAACCTCTACCTCTGACTGTCACTC < 41bp 1 0.555979129620487 1 0.721762537956238 experiment 0.888041740759026 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74773;RNA-BisSeq;Huh7;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26142417 chr1:26142422 . . 0 26 hm5C_associated_SNPs_2603 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:26142382-26142472
64251 chr1 26142437 26142437 1 + C T rs115473437 26142417 + 26142397 26142437 41 GGCTGACTGGGCAGAGGAACCTCTAGCTCTGACTGTCACTC GGCTGACTGGGCAGAGGAACCTCTAGCTCTGACTGTCACTT < 41bp 1 0.618216141845398 1 0.677272439002991 experiment 0.763567716309205 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74773;RNA-BisSeq;Huh7;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26142417 chr1:26142437 . . 0 41 hm5C_associated_SNPs_2604 1 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:26142382-26142472
64251 chr1 26142437 26142437 1 + C T rs115473437 26142445 + 26142425 26142465 41 CTGACTGTCACTCGGCTCTCCCTACCCATTTGGCTCTGGAA CTGACTGTCACTTGGCTCTCCCTACCCATTTGGCTCTGGAA < 41bp 1 0.0156292972377834 1 0.199934273958206 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26142445 chr1:26142437 . . 0 13 hm5C_associated_SNPs_2605 1 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:26142382-26142472
64251 chr1 26142980 26142980 1 + G A rs80311079 26142985 + 26142965 26143005 41 TCTCTGCAGGACTGCGGGAGCCAGCGCTCCTGCCGCCCCTC TCTCTGCAGGACTGCAGGAGCCAGCGCTCCTGCCGCCCCTC < 41bp 1 0.400142304743699 1 0.735195100307465 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26142985 chr1:26142980 . . 0 16 hm5C_associated_SNPs_2606 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26142955-26142988
64251 chr1 26143147 26143147 1 + C T rs116835124 26143127 + 26143107 26143147 41 GCTCTTCTACCTCTGGGGCACCACGGACTCCCCTTGGCCAC GCTCTTCTACCTCTGGGGCACCACGGACTCCCCTTGGCCAT < 41bp 1 0.401080112297603 1 0.11345437169075 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26143127 chr1:26143147 . . 0 41 hm5C_associated_SNPs_2608 0 0 12 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:26143107-26143154
64251 chr1 26143147 26143147 1 + C T rs116835124 26143128 + 26143108 26143148 41 CTCTTCTACCTCTGGGGCACCACGGACTCCCCTTGGCCACT CTCTTCTACCTCTGGGGCACCACGGACTCCCCTTGGCCATT < 41bp 1 0.628932879166771 1 0.550913870334625 experiment 0.742134241666458 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SELENON ENSG00000162430 UTR3 Human protein_coding chr1:26143128 chr1:26143147 . . 0 40 hm5C_associated_SNPs_2609 0 0 12 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:26143107-26143154
64251 chr1 26596080 26596080 1 + G A rs7550997 26596093 + 26596073 26596113 41 GAGAGAAGCAGAATTCTCCTCCGCTGGACATAGGTAAATAA GAGAGAAACAGAATTCTCCTCCGCTGGACATAGGTAAATAA < 41bp 1 0.156107143369779 1 0.247740805149078 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP85 ENSG00000130695 CDS Human protein_coding chr1:26596093 chr1:26596080 nonsynonymous SNV 0.465 0 8 hm5C_associated_SNPs_2610 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:26596051-26596087
64251 chr1 26596095 26596095 1 + G A rs76880849 26596093 + 26596073 26596113 41 GAGAGAAGCAGAATTCTCCTCCGCTGGACATAGGTAAATAA GAGAGAAGCAGAATTCTCCTCCACTGGACATAGGTAAATAA < 41bp 1 0.111218471551677 1 0.255843371152878 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP85 ENSG00000130695 CDS Human protein_coding chr1:26596093 chr1:26596095 nonsynonymous SNV 0.010 0 23 hm5C_associated_SNPs_2611 0 0 13 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:26596080-26596105
64251 chr1 26596096 26596096 1 + C T rs183440117 26596093 + 26596073 26596113 41 GAGAGAAGCAGAATTCTCCTCCGCTGGACATAGGTAAATAA GAGAGAAGCAGAATTCTCCTCCGTTGGACATAGGTAAATAA < 41bp 1 0.079615325847861 1 0.298396348953247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP85 ENSG00000130695 CDS Human protein_coding chr1:26596093 chr1:26596096 nonsynonymous SNV 0.181 1 24 hm5C_associated_SNPs_2612 0 0 13 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:26596080-26596105
64251 chr1 26597521 26597521 1 + T G rs140332904 26597518 + 26597498 26597538 41 CTTTCAGCCTGCAAGATAAACAGTCTGTGGAGGAGACCAGT CTTTCAGCCTGCAAGATAAACAGGCTGTGGAGGAGACCAGT < 41bp 1 0.540416886140871 1 0.722316086292267 experiment 0.919166227718257 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEP85 ENSG00000130695 CDS Human protein_coding chr1:26597518 chr1:26597521 nonsynonymous SNV 0.940 0 24 hm5C_associated_SNPs_2613 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr1:26597513-26597535
64251 chr1 26605141 26605141 1 + C T rs375661101 26605135 + 26605115 26605155 41 GGGCTCCTGCTGCTTAAAGGCAGAGCCGCCTGGTTGGTCTC GGGCTCCTGCTGCTTAAAGGCAGAGCTGCCTGGTTGGTCTC < 41bp 1 0.715298505018134 1 0.786102652549744 experiment 0.569402989963732 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP85 ENSG00000130695 UTR3 Human protein_coding chr1:26605135 chr1:26605141 . . 0 27 hm5C_associated_SNPs_2614 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:26605130-26605156
64251 chr1 26606560 26606560 1 + C T rs558012736 26606554 + 26606534 26606574 41 CGGGCGGAGCAGGAAGGAAACCGCTCCCGAGCACGGCGGCG CGGGCGGAGCAGGAAGGAAACCGCTCTCGAGCACGGCGGCG < 41bp 1 0.621981651558532 1 0.112564623355865 experiment 0.756036696882937 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BGRL3 ENSG00000142669 UTR5 Human protein_coding chr1:26606554 chr1:26606560 . 1.000 0 27 hm5C_associated_SNPs_2615 0 0 2 DROSHA POSTAR2 ENCODE chr1:26606456-26606563
64251 chr1 26607632 26607632 1 + T C rs116476745 26607647 + 26607627 26607667 41 CAGAGTTCCCCTGCTGGACTCCATCACCACACTCCCCCCAG CAGAGCTCCCCTGCTGGACTCCATCACCACACTCCCCCCAG < 41bp 1 0.128940453607785 1 0.23531237244606 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BGRL3 ENSG00000142669 UTR3 Human protein_coding chr1:26607647 chr1:26607632 . . 0 6 hm5C_associated_SNPs_2616 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26607584-26607648
64251 chr1 26607632 26607632 1 + T C rs116476745 26607648 + 26607628 26607668 41 AGAGTTCCCCTGCTGGACTCCATCACCACACTCCCCCCAGC AGAGCTCCCCTGCTGGACTCCATCACCACACTCCCCCCAGC < 41bp 1 0.47548090624109 1 0.352783143520355 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BGRL3 ENSG00000142669 UTR3 Human protein_coding chr1:26607648 chr1:26607632 . . 0 5 hm5C_associated_SNPs_2617 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26607584-26607648
64251 chr1 26883511 26883511 1 + A C rs2229712 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGTCGTGAGATCACGCCACCCTTCAAGCCAGC < 41bp 1 0.312259409820983 1 0.629072785377502 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883511 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_2618 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr1 27023062 27023062 1 + G A rs547230159 27023074 + 27023054 27023094 41 GCCGGGCAGGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCA GCCGGGCAAGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCA < 41bp 1 0.358231184774192 1 0.174647092819214 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023074 chr1:27023062 synonymous SNV . 0 9 hm5C_associated_SNPs_2619 0 0 9 AGGF1 POSTAR2 ENCODE chr1:27023053-27023081
64251 chr1 27023062 27023062 1 + G A rs547230159 27023075 + 27023055 27023095 41 CCGGGCAGGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCAG CCGGGCAAGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCAG < 41bp 1 0.338521513468199 1 0.317683815956116 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023075 chr1:27023062 synonymous SNV . 0 8 hm5C_associated_SNPs_2620 0 0 9 AGGF1 POSTAR2 ENCODE chr1:27023053-27023081
64251 chr1 27023062 27023062 1 + G A rs547230159 27023076 + 27023056 27023096 41 CGGGCAGGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCAGC CGGGCAAGAAAGCGAGGGCCCCGCCGTGGGGCCGCCGCAGC < 41bp 1 0.426072729844312 1 0.213148087263107 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023076 chr1:27023062 synonymous SNV . 0 7 hm5C_associated_SNPs_2621 0 0 9 AGGF1 POSTAR2 ENCODE chr1:27023053-27023081
64251 chr1 27023252 27023252 1 + C T rs571264557 27023263 + 27023243 27023283 41 CTCACGGAGCCGCCCGGCGGCGGCGGTGGCGGCAGCAGCGA CTCACGGAGTCGCCCGGCGGCGGCGGTGGCGGCAGCAGCGA < 41bp 1 0.797067603322929 1 0.761820554733276 experiment 0.405864793354141 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023263 chr1:27023252 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_2622 1 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27023217-27023269
64251 chr1 27023252 27023252 1 + C T rs571264557 27023266 + 27023246 27023286 41 ACGGAGCCGCCCGGCGGCGGCGGTGGCGGCAGCAGCGATGG ACGGAGTCGCCCGGCGGCGGCGGTGGCGGCAGCAGCGATGG < 41bp 1 0.684008233852097 1 0.713597238063812 experiment 0.631983532295806 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023266 chr1:27023252 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_2623 1 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27023217-27023269
64251 chr1 27023267 27023267 1 + G A rs536658556 27023266 + 27023246 27023286 41 ACGGAGCCGCCCGGCGGCGGCGGTGGCGGCAGCAGCGATGG ACGGAGCCGCCCGGCGGCGGCAGTGGCGGCAGCAGCGATGG < 41bp 1 0.651380144499196 1 0.488214284181595 experiment 0.697239711001607 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023266 chr1:27023267 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_2624 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27023217-27023269
64251 chr1 27023267 27023267 1 + G A rs536658556 27023275 + 27023255 27023295 41 CCCGGCGGCGGCGGTGGCGGCAGCAGCGATGGGGTGGGGGC CCCGGCGGCGGCAGTGGCGGCAGCAGCGATGGGGTGGGGGC < 41bp 1 0.779603225886631 1 0.522676467895508 experiment 0.440793548226738 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023275 chr1:27023267 nonsynonymous SNV 0.997 0 13 hm5C_associated_SNPs_2625 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27023217-27023269
64251 chr1 27088719 27088719 1 + T C rs564495050 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCCGCGTCAGCCCTCCGGAGGACAGATA < 41bp 1 0.183032596058617 1 0.103920996189117 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088719 synonymous SNV . 0 26 hm5C_associated_SNPs_2626 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:27088700-27088720
64251 chr1 27181427 27181427 1 + G A rs760093 27181407 + 27181387 27181427 41 CATATCCCCTGGGCTGCCCCCTGCCCCATCCCCTTTGAGTG CATATCCCCTGGGCTGCCCCCTGCCCCATCCCCTTTGAGTA < 41bp 1 0.217349754281451 1 0.444362282752991 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZDHHC18 ENSG00000204160 UTR3 Human protein_coding chr1:27181407 chr1:27181427 . . 0 41 hm5C_associated_SNPs_2627 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:27181153-27181430
64251 chr1 27181427 27181427 1 + G A rs760093 27181411 + 27181391 27181431 41 TCCCCTGGGCTGCCCCCTGCCCCATCCCCTTTGAGTGTCAG TCCCCTGGGCTGCCCCCTGCCCCATCCCCTTTGAGTATCAG < 41bp 1 0.0629265147350358 1 0.461398959159851 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZDHHC18 ENSG00000204160 UTR3 Human protein_coding chr1:27181411 chr1:27181427 . . 0 37 hm5C_associated_SNPs_2628 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:27181153-27181430
64251 chr1 27181475 27181475 1 + C T rs144835502 27181460 + 27181440 27181480 41 TGAGCCAAGGGGACAGGGGGCACGTGCACTGGTCACGAGAA TGAGCCAAGGGGACAGGGGGCACGTGCACTGGTCATGAGAA < 41bp 1 0.583884604154118 1 0.0918984115123749 experiment 0.832230791691763 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZDHHC18 ENSG00000204160 UTR3 Human protein_coding chr1:27181460 chr1:27181475 . . 0 36 hm5C_associated_SNPs_2629 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:27181441-27181476
64251 chr1 27269164 27269164 1 + A G rs142365524 27269155 + 27269135 27269175 41 CCCTGATTGTAAGCAGGATACTGAGGAAGATGAGGAGGAAG CCCTGATTGTAAGCAGGATACTGAGGAAGGTGAGGAGGAAG < 41bp 1 0.586451604611058 1 0.273881107568741 experiment 0.827096790777884 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUDC ENSG00000090273 CDS Human protein_coding chr1:27269155 chr1:27269164 nonsynonymous SNV 0.812 0 30 hm5C_associated_SNPs_2630 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:27269144-27269186
64251 chr1 27634429 27634429 1 + C T rs561366548 27634439 + 27634419 27634459 41 GTCTCTTCTCCGTGACCTTTCTCTAGCCAGGGAGAAGGGAG GTCTCTTCTCTGTGACCTTTCTCTAGCCAGGGAGAAGGGAG < 41bp 1 0.504131526526286 1 0.76724898815155 experiment 0.991736946947428 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control WDTC1 ENSG00000142784 UTR3 Human protein_coding chr1:27634439 chr1:27634429 . . 0 11 hm5C_associated_SNPs_2631 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:27634363-27634433
64251 chr1 27662383 27662383 1 + G A rs138496948 27662369 + 27662349 27662389 41 GGTCCCAGCATGGGGTGCACCGGGTACACTTAACGTGTCTC GGTCCCAGCATGGGGTGCACCGGGTACACTTAACATGTCTC < 41bp 1 0.710799597575725 1 0.740308821201324 experiment 0.57840080484855 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662369 chr1:27662383 . . 0 35 hm5C_associated_SNPs_2632 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:27662369-27662391
64251 chr1 27662666 27662666 1 + A G rs9203 27662665 + 27662645 27662685 41 AGACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGGT AGACAGAGCAGTGTAGACAGCGCTCAGCCCCAGCCCCAGGT < 41bp 1 0.34574673679401 1 0.260140269994736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662665 chr1:27662666 . . 0 22 hm5C_associated_SNPs_2633 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:27662592-27662668
64251 chr1 27662666 27662666 1 + A G rs9203 27662667 + 27662647 27662687 41 ACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGGTGT ACAGAGCAGTGTAGACAGCGCTCAGCCCCAGCCCCAGGTGT < 41bp 1 0.524827374165332 1 0.111957103013992 experiment 0.950345251669335 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662667 chr1:27662666 . . 0 20 hm5C_associated_SNPs_2634 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:27662592-27662668
64251 chr1 27662684 27662684 1 + G A rs115588557 27662665 + 27662645 27662685 41 AGACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGGT AGACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGAT < 41bp 1 0.31413144503932 1 0.0443465113639832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662665 chr1:27662684 . . 0 40 hm5C_associated_SNPs_2635 0 0 4 LARP4 POSTAR2 ENCODE chr1:27662623-27662707
64251 chr1 27662684 27662684 1 + G A rs115588557 27662667 + 27662647 27662687 41 ACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGGTGT ACAGAGCAGTGTAGACAGCACTCAGCCCCAGCCCCAGATGT < 41bp 1 0.533147924122413 1 0.0667047500610352 experiment 0.933704151755173 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662667 chr1:27662684 . . 0 38 hm5C_associated_SNPs_2636 0 0 4 LARP4 POSTAR2 ENCODE chr1:27662623-27662707
64251 chr1 28099751 28099751 1 + C T rs574359778 28099765 + 28099745 28099785 41 AGCCTGCGGGTCCCGGCTGGCGGCTGCTTCCGGTAGGAGAG AGCCTGTGGGTCCCGGCTGGCGGCTGCTTCCGGTAGGAGAG < 41bp 1 0.683522927330432 1 0.793231666088104 experiment 0.632954145339136 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 UTR5 Human protein_coding chr1:28099765 chr1:28099751 . . 0 7 hm5C_associated_SNPs_2642 0 0 3 DDX3X POSTAR2 ENCODE chr1:28099733-28099820
64251 chr1 28099751 28099751 1 + C T rs574359778 28099768 + 28099748 28099788 41 CTGCGGGTCCCGGCTGGCGGCTGCTTCCGGTAGGAGAGCGG CTGTGGGTCCCGGCTGGCGGCTGCTTCCGGTAGGAGAGCGG < 41bp 1 0.606693418813686 1 0.425193578004837 experiment 0.786613162372628 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STX12 ENSG00000117758 UTR5 Human protein_coding chr1:28099768 chr1:28099751 . . 0 4 hm5C_associated_SNPs_2643 0 0 3 DDX3X POSTAR2 ENCODE chr1:28099733-28099820
64251 chr1 28099827 28099827 1 + C G rs151097430 28099839 + 28099819 28099859 41 ATGTCATACGGTCCCTTAGACATGTACCGGAACCCGGGGCC ATGTCATAGGGTCCCTTAGACATGTACCGGAACCCGGGGCC < 41bp 1 0.667636912644269 1 0.255973637104034 experiment 0.664726174711461 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099839 chr1:28099827 stopgain 0.992 1 9 hm5C_associated_SNPs_2644 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:28099820-28099840
64251 chr1 28562671 28562671 1 + G A rs190185865 28562651 + 28562631 28562671 41 CATTAGCGCGTAACGAGAGACTGCTTGCTGCGGCAGAGACG CATTAGCGCGTAACGAGAGACTGCTTGCTGCGGCAGAGACA < 41bp 1 0.495286293858414 1 0.150444626808167 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATPIF1 ENSG00000130770 UTR5 Human protein_coding chr1:28562651 chr1:28562671 . . 0 41 hm5C_associated_SNPs_2646 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:28562640-28562760
64251 chr1 28600574 28600574 1 + C T rs114922467 28600565 + 28600545 28600585 41 CCTCAGCTGACATCCTGGAGCCCTCTCCACACCCAGACATG CCTCAGCTGACATCCTGGAGCCCTCTCCATACCCAGACATG < 41bp 1 0.0206874586523463 1 0.0153647661209106 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28600565 chr1:28600574 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_2647 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:28600551-28600584
64251 chr1 28835866 28835866 1 + G T rs570763840 28835864 + 28835844 28835884 41 CCCAGGTTCAGGCGATTCTCCTGCCTCAGCCTCCCAAGTAG CCCAGGTTCAGGCGATTCTCCTTCCTCAGCCTCCCAAGTAG < 41bp 1 0.209277944608878 1 0.0542799234390259 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNHG3 ENSG00000242125 ncRNA_exonic Human sense_intronic chr1:28835864 chr1:28835866 . . 0 23 hm5C_associated_SNPs_2648 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:28835852-28835873
64251 chr1 28861636 28861636 1 + G A rs2066726 28861637 + 28861617 28861657 41 TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCA TGCAGGTGCAGCTGGATGTACCTGTGGTAAAGGTGGCCTCA < 41bp 1 0.300582107908707 1 0.238028407096863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861637 chr1:28861636 synonymous SNV . 0 20 hm5C_associated_SNPs_2649 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28861595-28861645
64251 chr1 28880201 28880201 1 + T C rs145048352 28880211 + 28880191 28880231 41 TTTGCCACCATGGGGGAGACCGTAATGAGCGTCAAAATTAT TTTGCCACCACGGGGGAGACCGTAATGAGCGTCAAAATTAT < 41bp 1 0.587768694472669 1 0.333475470542908 experiment 0.824462611054663 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28880211 chr1:28880201 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_2650 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:28880176-28880210
64251 chr1 28975120 28975120 1 + C A rs145438715 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC ATTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC < 41bp 1 0.613649537680613 1 0.200993150472641 experiment 0.772700924638773 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975120 . . 0 1 hm5C_associated_SNPs_2651 0 0 52 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr1:28975100-28975120
64251 chr1 28975127 28975127 1 + C G rs192651029 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTGGTGAGTGGCACACGTAGGGCAACTCGATTGCTC < 41bp 1 0.661451080009655 1 0.242402166128159 experiment 0.677097839980689 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975127 . . 0 8 hm5C_associated_SNPs_2652 0 0 44 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:28975100-28975140
64251 chr1 28975150 28975150 1 + C G rs35910435 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGTGGCACACGTAGGGCAAGTCGATTGCTC < 41bp 1 0.577015562711089 1 0.224917590618134 experiment 0.845968874577821 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975150 . . 0 31 hm5C_associated_SNPs_2653 0 0 101 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975150 28975150 1 + C G rs35910435 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT CAAGTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT < 41bp 1 0.734273519170697 1 0.79010421037674 experiment 0.531452961658606 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975150 . . 0 4 hm5C_associated_SNPs_2654 0 0 101 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975152 28975152 1 + C A rs75113560 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGTGGCACACGTAGGGCAACTAGATTGCTC < 41bp 1 0.58925396563872 1 0.189982175827026 experiment 0.821492068722561 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975152 . . 0 33 hm5C_associated_SNPs_2655 0 0 99 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975152 28975152 1 + C A rs75113560 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT CAACTAGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT < 41bp 1 0.763821179940802 1 0.842550873756409 experiment 0.472357640118397 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975152 . . 0 6 hm5C_associated_SNPs_2656 0 0 99 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975153 28975153 1 + G A rs368700594 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCAATTGCTC < 41bp 1 0.577589249860906 1 0.142604142427444 experiment 0.844821500278188 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975153 . . 0 34 hm5C_associated_SNPs_2657 0 0 133 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975153 28975153 1 + G A rs368700594 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT CAACTCAATTGCTCTGCGTGCGGAATCGACATCAAGAGATT < 41bp 1 0.768142937579628 1 0.799585938453674 experiment 0.463714124840744 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975153 . . 0 7 hm5C_associated_SNPs_2658 0 0 133 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975174 28975174 1 + G A rs541092342 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT CAACTCGATTGCTCTGCGTGCGGAATCAACATCAAGAGATT < 41bp 1 0.719660962645743 1 0.766654968261719 experiment 0.560678074708515 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975174 . . 0 28 hm5C_associated_SNPs_2659 0 0 95 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975174 28975174 1 + G A rs541092342 28975176 + 28975156 28975196 41 TGCTCTGCGTGCGGAATCGACATCAAGAGATTTCGGAAGCA TGCTCTGCGTGCGGAATCAACATCAAGAGATTTCGGAAGCA < 41bp 1 0.666608274365171 1 0.0956124663352966 experiment 0.666783451269658 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975176 chr1:28975174 . . 0 19 hm5C_associated_SNPs_2660 0 0 95 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975209 28975209 1 + A C rs111868204 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTCTTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC < 41bp 1 0.63456954863817 1 0.463653892278671 experiment 0.730860902723661 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975209 . . 0 3 hm5C_associated_SNPs_2661 0 0 193 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975216 28975216 1 + C A rs192996376 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGAAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC < 41bp 1 0.62137618812669 1 0.257187962532043 experiment 0.757247623746619 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975216 . . 0 10 hm5C_associated_SNPs_2662 0 0 184 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975216 28975216 1 + C A rs192996376 28975234 + 28975214 28975254 41 GGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG GGAAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG < 41bp 1 0.648826060388039 1 0.506487488746643 experiment 0.702347879223921 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975234 chr1:28975216 . . 0 3 hm5C_associated_SNPs_2663 0 0 184 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975221 28975221 1 + G A rs143926421 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGCAGCTAGTGATCGTTGGTCCCGGCGCCCTTTC < 41bp 1 0.628259334833751 1 0.447669386863708 experiment 0.743481330332499 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975221 . . 0 15 hm5C_associated_SNPs_2664 0 0 116 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975221 28975221 1 + G A rs143926421 28975234 + 28975214 28975254 41 GGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG GGCAGCTAGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG < 41bp 1 0.618993363853183 1 0.547265768051147 experiment 0.762013272293634 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975234 chr1:28975221 . . 0 8 hm5C_associated_SNPs_2665 0 0 116 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975221 28975221 1 + G A rs143926421 28975241 + 28975221 28975261 41 GGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG AGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG < 41bp 1 0.0489124082613244 1 0.0363006591796875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975241 chr1:28975221 . . 0 1 hm5C_associated_SNPs_2666 0 0 116 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chr1 28975234 28975234 1 + C A rs181924966 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGCAGCTGGTGATCGTTGGTACCGGCGCCCTTTC < 41bp 1 0.624974340398568 1 0.350243091583252 experiment 0.750051319202864 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975234 . . 0 28 hm5C_associated_SNPs_2667 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975234 28975234 1 + C A rs181924966 28975241 + 28975221 28975261 41 GGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG GGTGATCGTTGGTACCGGCGCCCTTTCTTTACTGTTATATG < 41bp 1 0.0490158909764047 1 0.0306264758110046 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975241 chr1:28975234 . . 0 14 hm5C_associated_SNPs_2668 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975234 28975234 1 + C A rs181924966 28975242 + 28975222 28975262 41 GTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGT GTGATCGTTGGTACCGGCGCCCTTTCTTTACTGTTATATGT < 41bp 1 0.0151604970622452 1 0.0482748448848724 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975242 chr1:28975234 . . 0 13 hm5C_associated_SNPs_2669 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975234 28975234 1 + C A rs181924966 28975243 + 28975223 28975263 41 TGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGTT TGATCGTTGGTACCGGCGCCCTTTCTTTACTGTTATATGTT < 41bp 1 0.0318492859548094 1 0.0662789344787598 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975243 chr1:28975234 . . 0 12 hm5C_associated_SNPs_2670 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975235 28975235 1 + C A rs184617414 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGCAGCTGGTGATCGTTGGTCACGGCGCCCTTTC < 41bp 1 0.632127427825263 1 0.330434024333954 experiment 0.735745144349474 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975235 . . 0 29 hm5C_associated_SNPs_2671 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975235 28975235 1 + C A rs184617414 28975241 + 28975221 28975261 41 GGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG GGTGATCGTTGGTCACGGCGCCCTTTCTTTACTGTTATATG < 41bp 1 0.0530850110165099 1 0.0556856393814087 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975241 chr1:28975235 . . 0 15 hm5C_associated_SNPs_2672 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975235 28975235 1 + C A rs184617414 28975242 + 28975222 28975262 41 GTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGT GTGATCGTTGGTCACGGCGCCCTTTCTTTACTGTTATATGT < 41bp 1 0.0163460626435649 1 0.106142312288284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975242 chr1:28975235 . . 0 14 hm5C_associated_SNPs_2673 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975235 28975235 1 + C A rs184617414 28975243 + 28975223 28975263 41 TGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGTT TGATCGTTGGTCACGGCGCCCTTTCTTTACTGTTATATGTT < 41bp 1 0.0307199585791733 1 0.0550669729709625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975243 chr1:28975235 . . 0 13 hm5C_associated_SNPs_2674 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975238 28975238 1 + G C rs117139663 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGCAGCTGGTGATCGTTGGTCCCGCCGCCCTTTC < 41bp 1 0.617858921065183 1 0.464811444282532 experiment 0.764282157869633 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975238 . . 0 32 hm5C_associated_SNPs_2675 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975238 28975238 1 + G C rs117139663 28975234 + 28975214 28975254 41 GGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG GGCAGCTGGTGATCGTTGGTCCCGCCGCCCTTTCTTTACTG < 41bp 1 0.350918734727181 1 0.49946653842926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975234 chr1:28975238 . . 0 25 hm5C_associated_SNPs_2676 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975238 28975238 1 + G C rs117139663 28975241 + 28975221 28975261 41 GGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG GGTGATCGTTGGTCCCGCCGCCCTTTCTTTACTGTTATATG < 41bp 1 0.0534793808231012 1 0.0530894696712494 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975241 chr1:28975238 . . 0 18 hm5C_associated_SNPs_2677 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975238 28975238 1 + G C rs117139663 28975242 + 28975222 28975262 41 GTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGT GTGATCGTTGGTCCCGCCGCCCTTTCTTTACTGTTATATGT < 41bp 1 0.0188267271973038 1 0.126201331615448 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975242 chr1:28975238 . . 0 17 hm5C_associated_SNPs_2678 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975238 28975238 1 + G C rs117139663 28975243 + 28975223 28975263 41 TGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGTT TGATCGTTGGTCCCGCCGCCCTTTCTTTACTGTTATATGTT < 41bp 1 0.0291797427774953 1 0.0576359033584595 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975243 chr1:28975238 . . 0 16 hm5C_associated_SNPs_2679 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975243 28975243 1 + C A rs188285085 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCATTTC < 41bp 1 0.601812851236721 1 0.413892567157745 experiment 0.796374297526558 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975243 . . 0 37 hm5C_associated_SNPs_2680 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975243 28975243 1 + C A rs188285085 28975234 + 28975214 28975254 41 GGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG GGCAGCTGGTGATCGTTGGTCCCGGCGCCATTTCTTTACTG < 41bp 1 0.629493843324723 1 0.583902478218079 experiment 0.741012313350554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975234 chr1:28975243 . . 0 30 hm5C_associated_SNPs_2681 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975243 28975243 1 + C A rs188285085 28975241 + 28975221 28975261 41 GGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATG GGTGATCGTTGGTCCCGGCGCCATTTCTTTACTGTTATATG < 41bp 1 0.0444172926300673 1 0.067025750875473 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975241 chr1:28975243 . . 0 23 hm5C_associated_SNPs_2682 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 28975243 28975243 1 + C A rs188285085 28975242 + 28975222 28975262 41 GTGATCGTTGGTCCCGGCGCCCTTTCTTTACTGTTATATGT GTGATCGTTGGTCCCGGCGCCATTTCTTTACTGTTATATGT < 41bp 1 0.0495019354799631 1 0.18689826130867 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975242 chr1:28975243 . . 0 22 hm5C_associated_SNPs_2683 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975232-28975254
64251 chr1 29069432 29069432 1 + C G rs16838382 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGCGGGTCCATTAGTAGTAACATCGTGGC < 41bp 1 0.403447104134196 1 0.14900016784668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069432 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_2684 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:29069420-29069440
64251 chr1 29069443 29069443 1 + G A rs61787570 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCATGGC < 41bp 1 0.264258537093286 1 0.191543191671371 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069443 nonsynonymous SNV 0.996 1 37 hm5C_associated_SNPs_2685 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29069427-29069451
64251 chr1 29444909 29444909 1 + G A rs537153855 29444902 + 29444882 29444922 41 GCTGGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTG GCTGGGATTACAGGTGTGAGCCACCACACCCGGCCGATTTG < 41bp 1 0.333041799766259 1 0.325904279947281 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444902 chr1:29444909 . . 0 28 hm5C_associated_SNPs_2692 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 29444909 29444909 1 + G A rs537153855 29444903 + 29444883 29444923 41 CTGGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTGG CTGGGATTACAGGTGTGAGCCACCACACCCGGCCGATTTGG < 41bp 1 0.703844067415484 1 0.859979927539825 experiment 0.592311865169031 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444903 chr1:29444909 . . 0 27 hm5C_associated_SNPs_2693 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 29444909 29444909 1 + G A rs537153855 29444905 + 29444885 29444925 41 GGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTGGGG GGGATTACAGGTGTGAGCCACCACACCCGGCCGATTTGGGG < 41bp 1 0.33345371086178 1 0.346640944480896 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444905 chr1:29444909 . . 0 25 hm5C_associated_SNPs_2694 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 29444912 29444912 1 + C T rs116358908 29444902 + 29444882 29444922 41 GCTGGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTG GCTGGGATTACAGGTGTGAGCCACCACGCCTGGCCGATTTG < 41bp 1 0.295668015681507 1 0.182088077068329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444902 chr1:29444912 . . 0 31 hm5C_associated_SNPs_2695 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 29444912 29444912 1 + C T rs116358908 29444903 + 29444883 29444923 41 CTGGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTGG CTGGGATTACAGGTGTGAGCCACCACGCCTGGCCGATTTGG < 41bp 1 0.648739004708135 1 0.794226169586182 experiment 0.702521990583731 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444903 chr1:29444912 . . 0 30 hm5C_associated_SNPs_2696 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 29444912 29444912 1 + C T rs116358908 29444905 + 29444885 29444925 41 GGGATTACAGGTGTGAGCCACCACGCCCGGCCGATTTGGGG GGGATTACAGGTGTGAGCCACCACGCCTGGCCGATTTGGGG < 41bp 1 0.239294067320658 1 0.4383944272995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41 ENSG00000159023 UTR3 Human protein_coding chr1:29444905 chr1:29444912 . . 0 28 hm5C_associated_SNPs_2697 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29444906-29444928
64251 chr1 32573672 32573672 1 + A G rs377161233 32573677 + 32573657 32573697 41 ATATTGTCTACTGAAAGCTGCCGCTGAAGCTGCCGCCGTTG ATATTGTCTACTGAAGGCTGCCGCTGAAGCTGCCGCCGTTG < 41bp 1 0.163855226503547 1 0.0748861730098724 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA6 ENSG00000025800 UTR5 Human protein_coding chr1:32573677 chr1:32573672 . . 0 16 hm5C_associated_SNPs_2702 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:32573647-32573711
64251 chr1 32637810 32637810 1 + C T rs542125438 32637790 + 32637770 32637810 41 TGCTTCCTCGCTCAGGAGGCCTGAGCTTGGTCCTTTTCCTC TGCTTCCTCGCTCAGGAGGCCTGAGCTTGGTCCTTTTCCTT < 41bp 1 0.323324322432883 1 0.0929969847202301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA6 ENSG00000250135 ncRNA_intronic Human sense_intronic chr1:32637790 chr1:32637810 . . 0 41 hm5C_associated_SNPs_2703 0 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:32637762-32637814
64251 chr1 32640633 32640633 1 + G A rs1076753 32640618 + 32640598 32640638 41 GCTGGGATCCATGTAGTGGGCACTAGCTGCTCTTTGGCCAA GCTGGGATCCATGTAGTGGGCACTAGCTGCTCTTTAGCCAA < 41bp 1 0.599507824704194 1 0.346124142408371 experiment 0.800984350591613 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KPNA6 ENSG00000250135 ncRNA_intronic Human sense_intronic chr1:32640618 chr1:32640633 . . 0 36 hm5C_associated_SNPs_2704 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32640586-32640636
64251 chr1 32647150 32647150 1 + A C rs530562335 32647149 + 32647129 32647169 41 AGACCGAGACCATCGAAGGCCACAGGAGAAGAAAAAAGCCA AGACCGAGACCATCGAAGGCCCCAGGAGAAGAAAAAAGCCA < 41bp 1 0.20149683640058 1 0.403977394104004 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXLNA ENSG00000084652 CDS Human protein_coding chr1:32647149 chr1:32647150 synonymous SNV . 0 22 hm5C_associated_SNPs_2705 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32647100-32647156
64251 chr1 33322974 33322974 1 + G A rs564103922 33322954 + 33322934 33322974 41 CGGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCG CGGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCA < 41bp 1 0.548365852516926 1 0.104910999536514 experiment 0.903268294966148 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33322954 chr1:33322974 . . 0 41 hm5C_associated_SNPs_2706 0 0 2 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:33322967-33322988
64251 chr1 33322974 33322974 1 + G A rs564103922 33322955 + 33322935 33322975 41 GGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCGT GGAGTTTCGCTGTTGTTGCCCAGGCTGGAGTGCAATGGCAT < 41bp 1 0.507888585630475 1 0.378653019666672 experiment 0.98422282873905 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33322955 chr1:33322974 . . 0 40 hm5C_associated_SNPs_2707 0 0 2 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:33322967-33322988
64251 chr1 33322974 33322974 1 + G A rs564103922 33322967 + 33322947 33322987 41 TTGTTGCCCAGGCTGGAGTGCAATGGCGTATCTCCACTCAC TTGTTGCCCAGGCTGGAGTGCAATGGCATATCTCCACTCAC < 41bp 1 0.511574462885828 1 0.0833577215671539 experiment 0.976851074228344 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33322967 chr1:33322974 . . 0 28 hm5C_associated_SNPs_2708 0 0 2 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:33322967-33322988
64251 chr1 33745924 33745924 1 + C T rs140453245 33745921 + 33745901 33745941 41 ATCAAGACAATCCAGGGCCACGGCCTGCTTGGCCCCCCCAA ATCAAGACAATCCAGGGCCACGGTCTGCTTGGCCCCCCCAA < 41bp 1 0.299636163561031 1 0.5082106590271 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33745921 chr1:33745924 synonymous SNV . 0 24 hm5C_associated_SNPs_2709 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:33745906-33745930
64251 chr1 35824639 35824639 1 + C A rs147284119 35824625 + 35824605 35824645 41 AATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATG AATGCCGAATCAAACAGGATCTGAAAATTCATTGATGGATG < 41bp 1 0.403673000831424 1 0.298425525426865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824625 chr1:35824639 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_2718 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:35824599-35824646
64251 chr1 36026181 36026181 1 + G A rs147068711 36026179 + 36026159 36026199 41 TCCTCACAGCCCGGGGGGACCCGGACGATGCTGCCCGCCGC TCCTCACAGCCCGGGGGGACCCAGACGATGCTGCCCGCCGC < 41bp 1 0.63362953240133 1 0.725995898246765 experiment 0.73274093519734 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026179 chr1:36026181 synonymous SNV . 0 23 hm5C_associated_SNPs_2719 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:36026149-36026182
64251 chr1 36032289 36032289 1 + C G rs575330822 36032269 + 36032249 36032289 41 CACACACACACACACACACACACACACACACACTCTTGATC CACACACACACACACACACACACACACACACACTCTTGATG < 41bp 1 0.289974165630603 1 0.0716461539268494 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCDN ENSG00000020129 UTR3 Human protein_coding chr1:36032269 chr1:36032289 . . 0 41 hm5C_associated_SNPs_2720 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:36032253-36032307
64251 chr1 36032289 36032289 1 + C G rs575330822 36032271 + 36032251 36032291 41 CACACACACACACACACACACACACACACACTCTTGATCCC CACACACACACACACACACACACACACACACTCTTGATGCC < 41bp 1 0.319841293731875 1 0.158643484115601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCDN ENSG00000020129 UTR3 Human protein_coding chr1:36032271 chr1:36032289 . . 0 39 hm5C_associated_SNPs_2721 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:36032253-36032307
64251 chr1 36032289 36032289 1 + C G rs575330822 36032273 + 36032253 36032293 41 CACACACACACACACACACACACACACACTCTTGATCCCTT CACACACACACACACACACACACACACACTCTTGATGCCTT < 41bp 1 0.31818005499136 1 0.162828147411346 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCDN ENSG00000020129 UTR3 Human protein_coding chr1:36032273 chr1:36032289 . . 0 37 hm5C_associated_SNPs_2722 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:36032253-36032307
64251 chr1 36032289 36032289 1 + C G rs575330822 36032275 + 36032255 36032295 41 CACACACACACACACACACACACACACTCTTGATCCCTTGC CACACACACACACACACACACACACACTCTTGATGCCTTGC < 41bp 1 0.271771609816997 1 0.0630843937397003 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCDN ENSG00000020129 UTR3 Human protein_coding chr1:36032275 chr1:36032289 . . 0 35 hm5C_associated_SNPs_2723 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:36032253-36032307
64251 chr1 36032289 36032289 1 + C G rs575330822 36032277 + 36032257 36032297 41 CACACACACACACACACACACACACTCTTGATCCCTTGCTT CACACACACACACACACACACACACTCTTGATGCCTTGCTT < 41bp 1 0.331437975900975 1 0.0536175668239594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCDN ENSG00000020129 UTR3 Human protein_coding chr1:36032277 chr1:36032289 . . 0 33 hm5C_associated_SNPs_2724 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:36032253-36032307
64251 chr1 36354035 36354035 1 + C T rs140869088 36354031 + 36354011 36354051 41 GCCTCTTTGTCTTGTAGCTGCGGGCGCTTACCTGCCCCCCC GCCTCTTTGTCTTGTAGCTGCGGGTGCTTACCTGCCCCCCC < 41bp 1 0.799729855555659 1 0.881552278995514 experiment 0.400540288888681 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36354031 chr1:36354035 synonymous SNV . 0 25 hm5C_associated_SNPs_2726 0 0 4 METAP2 POSTAR2 ENCODE chr1:36354029-36354094
64251 chr1 36358832 36358832 1 + G A rs146336392 36358839 + 36358819 36358859 41 CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCATG CTGTTCCCTTGGAATCTGTGCAAGCCCTGGATGTGGCCATG < 41bp 1 0.258975795872783 1 0.260308623313904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36358839 chr1:36358832 synonymous SNV . 0 14 hm5C_associated_SNPs_2727 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr1:36358814-36358836
64251 chr1 36621910 36621910 1 + G C rs2274166 36621922 + 36621902 36621942 41 CGCTACTTGCCGGGCCGGGCCGGGCCGGGCGTGATGCGCCG CGCTACTTCCCGGGCCGGGCCGGGCCGGGCGTGATGCGCCG < 41bp 1 0.705815943346056 1 0.576734840869904 experiment 0.588368113307887 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAP7D1 ENSG00000116871 UTR5 Human protein_coding chr1:36621922 chr1:36621910 . . 0 9 hm5C_associated_SNPs_2728 0 0 10 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:36621886-36621918
64251 chr1 36646029 36646029 1 + G A rs186075701 36646039 + 36646019 36646059 41 CTCTTTGGCCGGAGCCAGATCTGCCCCTCAGTGCATTCGTG CTCTTTGGCCAGAGCCAGATCTGCCCCTCAGTGCATTCGTG < 41bp 1 0.252691951142259 1 0.0758446753025055 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP7D1 ENSG00000116871 UTR3 Human protein_coding chr1:36646039 chr1:36646029 . . 0 11 hm5C_associated_SNPs_2730 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:36645993-36646048
64251 chr1 36646049 36646049 1 + G A rs145904903 36646039 + 36646019 36646059 41 CTCTTTGGCCGGAGCCAGATCTGCCCCTCAGTGCATTCGTG CTCTTTGGCCGGAGCCAGATCTGCCCCTCAATGCATTCGTG < 41bp 1 0.298312243718298 1 0.117104947566986 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP7D1 ENSG00000116871 UTR3 Human protein_coding chr1:36646039 chr1:36646049 . . 0 31 hm5C_associated_SNPs_2731 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:36646023-36646074
64251 chr1 37948071 37948071 1 + G A rs142536124 37948073 + 37948053 37948093 41 CCCACTGGGCCGGCACGGGCCCAGCCTGGACAACTTCCTGC CCCACTGGGCCGGCACGGACCCAGCCTGGACAACTTCCTGC < 41bp 1 0.196726784997283 1 0.0863814055919647 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37948073 chr1:37948071 nonsynonymous SNV 0.984 0 19 hm5C_associated_SNPs_2734 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:37948065-37948101
64251 chr1 37948071 37948071 1 + G A rs142536124 37948074 + 37948054 37948094 41 CCACTGGGCCGGCACGGGCCCAGCCTGGACAACTTCCTGCG CCACTGGGCCGGCACGGACCCAGCCTGGACAACTTCCTGCG < 41bp 1 0.449683861923343 1 0.329294979572296 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37948074 chr1:37948071 nonsynonymous SNV 0.984 0 18 hm5C_associated_SNPs_2735 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:37948065-37948101
64251 chr1 38174366 38174366 1 + G T rs7526362 38174379 + 38174359 38174399 41 CCTGCCTGCAGTTGAGGGGGCGAAGAAGAACCCTGTGTTCT CCTGCCTTCAGTTGAGGGGGCGAAGAAGAACCCTGTGTTCT < 41bp 1 0.644997958709121 1 0.581405460834503 experiment 0.710004082581757 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174379 chr1:38174366 . . 0 8 hm5C_associated_SNPs_2736 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:38174355-38174376
64251 chr1 38174375 38174375 1 + G A rs559707 38174379 + 38174359 38174399 41 CCTGCCTGCAGTTGAGGGGGCGAAGAAGAACCCTGTGTTCT CCTGCCTGCAGTTGAGAGGGCGAAGAAGAACCCTGTGTTCT < 41bp 1 0.7167574690696 1 0.572007417678833 experiment 0.5664850618608 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174379 chr1:38174375 . . 0 17 hm5C_associated_SNPs_2737 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:38174355-38174376
64251 chr1 38174380 38174380 1 + G A rs72659465 38174379 + 38174359 38174399 41 CCTGCCTGCAGTTGAGGGGGCGAAGAAGAACCCTGTGTTCT CCTGCCTGCAGTTGAGGGGGCAAAGAAGAACCCTGTGTTCT < 41bp 1 0.650104010091341 1 0.433952540159225 experiment 0.699791979817318 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174379 chr1:38174380 . . 0 22 hm5C_associated_SNPs_2738 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:38174373-38174407
64251 chr1 38174583 38174583 1 + A C rs141712543 38174592 + 38174572 38174612 41 GCAGTGACCTCAGTAGGGAACATGTCCGTCTACCCTCTCGC GCAGTGACCTCCGTAGGGAACATGTCCGTCTACCCTCTCGC < 41bp 1 0.568921585554848 1 0.172007203102112 experiment 0.862156828890305 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174592 chr1:38174583 . . 0 12 hm5C_associated_SNPs_2739 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:38174511-38174589
64251 chr1 39776654 39776654 1 + A G rs146950475 39776662 + 39776642 39776682 41 GGACAATGCATTAAGGATTGCAGAGCAAGAGGTAAGCCCTA GGACAATGCATTGAGGATTGCAGAGCAAGAGGTAAGCCCTA < 41bp 1 0.247485878717214 1 0.36653533577919 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39776662 chr1:39776654 synonymous SNV . 0 13 hm5C_associated_SNPs_2752 0 0 11 BUD13 POSTAR2 ENCODE chr1:39776652-39776672
64251 chr1 39823343 39823343 1 + C G rs192201614 39823346 + 39823326 39823366 41 AACATGCATAAGGGAGGCAGCAGCCCCGAGACCCTTCCCTC AACATGCATAAGGGAGGGAGCAGCCCCGAGACCCTTCCCTC < 41bp 1 0.16517498924261 1 0.580478191375732 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39823346 chr1:39823343 synonymous SNV . 0 18 hm5C_associated_SNPs_2753 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:39823326-39823347
64251 chr1 39875227 39875227 1 + G T rs190463034 39875233 + 39875213 39875253 41 CGAAGGCCTGGCGCGGGGCTCCGCTCGCCTTGTTTTGCAGC CGAAGGCCTGGCGCTGGGCTCCGCTCGCCTTGTTTTGCAGC < 41bp 1 0.0499152968056493 1 0.140696376562119 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIAA0754 ENSG00000127603 intronic Human protein_coding chr1:39875233 chr1:39875227 . . 0 15 hm5C_associated_SNPs_2754 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:39875210-39875241
64251 chr1 39898283 39898283 1 + G A rs144615050 39898302 + 39898282 39898322 41 CGCCTGGAACAGGACCAGACCACAGCTCAGCTTCAGGTACA CACCTGGAACAGGACCAGACCACAGCTCAGCTTCAGGTACA < 41bp 1 0.242826226112944 1 0.185109406709671 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39898302 chr1:39898283 nonsynonymous SNV 0.997 4 2 hm5C_associated_SNPs_2755 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39898251-39898287
64251 chr1 39910477 39910477 1 + T C rs143526587 39910457 + 39910437 39910477 41 AGACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT AGACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAC < 41bp 1 0.0689504208108562 1 0.0614574253559113 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910457 chr1:39910477 synonymous SNV . 0 41 hm5C_associated_SNPs_2756 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910477 39910477 1 + T C rs143526587 39910466 + 39910446 39910486 41 AGAGTGTAGCACTTTTGGAGCAGAAGTGGCATGTGGTCAGC AGAGTGTAGCACTTTTGGAGCAGAAGTGGCACGTGGTCAGC < 41bp 1 0.256766261062746 1 0.240866839885712 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910466 chr1:39910477 synonymous SNV . 0 32 hm5C_associated_SNPs_2757 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910477 39910477 1 + T C rs143526587 39910475 + 39910455 39910495 41 CACTTTTGGAGCAGAAGTGGCATGTGGTCAGCAGTAAGATG CACTTTTGGAGCAGAAGTGGCACGTGGTCAGCAGTAAGATG < 41bp 1 0.179822150358968 1 0.300908386707306 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910475 chr1:39910477 synonymous SNV . 0 23 hm5C_associated_SNPs_2758 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910477 39910477 1 + T C rs143526587 39910486 + 39910466 39910506 41 CAGAAGTGGCATGTGGTCAGCAGTAAGATGGAAGAAAGAAA CAGAAGTGGCACGTGGTCAGCAGTAAGATGGAAGAAAGAAA < 41bp 1 0.127666440995728 1 0.475773245096207 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910486 chr1:39910477 synonymous SNV . 0 12 hm5C_associated_SNPs_2759 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 40533358 40533358 1 + G A rs34763876 40533350 + 40533330 40533370 41 AGTCTGCTTCCCGCTCATCACTGTTCGCGCAGATTAATCAG AGTCTGCTTCCCGCTCATCACTGTTCGCACAGATTAATCAG < 41bp 1 0.405554204081787 1 0.0859212875366211 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAP1 ENSG00000131236 CDS Human protein_coding chr1:40533350 chr1:40533358 synonymous SNV . 0 29 hm5C_associated_SNPs_2761 0 0 2 RPS11 POSTAR2 ENCODE chr1:40533332-40533385
64251 chr1 40997371 40997371 1 + C T rs150418119 40997380 + 40997360 40997400 41 GGAAGTGCGGGCGGGTGTTGCTCCCCTGTCTCTGGACGACG GGAAGTGCGGGTGGGTGTTGCTCCCCTGTCTCTGGACGACG < 41bp 1 0.529482968580743 1 0.396405935287476 experiment 0.941034062838514 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF684 ENSG00000117010 UTR5 Human protein_coding chr1:40997380 chr1:40997371 . . 0 12 hm5C_associated_SNPs_2762 0 0 1 NCBP2 POSTAR2 ENCODE chr1:40997337-40997471
64251 chr1 40997382 40997382 1 + C A rs138405225 40997380 + 40997360 40997400 41 GGAAGTGCGGGCGGGTGTTGCTCCCCTGTCTCTGGACGACG GGAAGTGCGGGCGGGTGTTGCTACCCTGTCTCTGGACGACG < 41bp 1 0.543472075280535 1 0.399595439434052 experiment 0.91305584943893 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF684 ENSG00000117010 UTR5 Human protein_coding chr1:40997380 chr1:40997382 . . 0 23 hm5C_associated_SNPs_2763 0 0 1 NCBP2 POSTAR2 ENCODE chr1:40997337-40997471
64251 chr1 40997389 40997389 1 + C T rs41268069 40997380 + 40997360 40997400 41 GGAAGTGCGGGCGGGTGTTGCTCCCCTGTCTCTGGACGACG GGAAGTGCGGGCGGGTGTTGCTCCCCTGTTTCTGGACGACG < 41bp 1 0.544288138358786 1 0.586774468421936 experiment 0.911423723282428 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF684 ENSG00000117010 UTR5 Human protein_coding chr1:40997380 chr1:40997389 . . 0 30 hm5C_associated_SNPs_2764 0 0 1 NCBP2 POSTAR2 ENCODE chr1:40997337-40997471
64251 chr1 40997453 40997453 1 + G T rs41268071 40997443 + 40997423 40997463 41 AGCCGGAGCTGCGAGCGAGGCAGTGAAAGGGTGGCAGGTAT AGCCGGAGCTGCGAGCGAGGCAGTGAAAGGTTGGCAGGTAT < 41bp 1 0.760274739438806 1 0.601860582828522 experiment 0.479450521122387 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF684 ENSG00000117010 UTR5 Human protein_coding chr1:40997443 chr1:40997453 . . 0 31 hm5C_associated_SNPs_2765 0 0 5 NCBP2 POSTAR2 ENCODE chr1:40997337-40997471
64251 chr1 41477552 41477552 1 + C T rs144530512 41477549 + 41477529 41477569 41 TCCTTGCAGTTCTTGAGTTGCGGCAGAACATCGCGATGGGA TCCTTGCAGTTCTTGAGTTGCGGTAGAACATCGCGATGGGA < 41bp 1 0.758593799118726 1 0.407622635364532 experiment 0.482812401762548 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CTPS1 ENSG00000171793 UTR3 Human protein_coding chr1:41477549 chr1:41477552 . . 0 24 hm5C_associated_SNPs_2768 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:41477329-41477555
64251 chr1 42925453 42925453 1 + G C rs61745591 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTGAGTCACGACACTCCTTTGTGTTTATTGTA < 41bp 1 0.0601161024922597 1 0.0534726977348328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925453 nonsynonymous SNV 0.943 0 23 hm5C_associated_SNPs_2769 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr1 43882213 43882213 1 + C T rs375794037 43882219 + 43882199 43882239 41 GCTCCAGGGATTATCGTGATCACGGATGGGGTGACCAGTGT GCTCCAGGGATTATTGTGATCACGGATGGGGTGACCAGTGT < 41bp 1 0.509149006507833 1 0.406282156705856 experiment 0.981701986984334 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43882219 chr1:43882213 synonymous SNV . 0 15 hm5C_associated_SNPs_2770 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43882202-43882236
64251 chr1 44058227 44058227 1 + G A rs79766207 44058240 + 44058220 44058260 41 TATGGGGGTGGGCGTCTTCACCCCCACCATTGAGGCCCGCA TATGGGGATGGGCGTCTTCACCCCCACCATTGAGGCCCGCA < 41bp 1 0.13765468100786 1 0.0764477849006653 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44058240 chr1:44058227 nonsynonymous SNV 0.991 0 8 hm5C_associated_SNPs_2773 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44058200-44058228
64251 chr1 44071221 44071221 1 + G A rs631248 44071222 + 44071202 44071242 41 GGTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGG GGTTCTACATTGTTGTGGTACCCATTGACCGTGTGGGCGGG < 41bp 1 0.101318890502918 1 0.0481720864772797 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071222 chr1:44071221 synonymous SNV . 0 20 hm5C_associated_SNPs_2774 0 0 2 SF3A3 POSTAR2 ENCODE chr1:44071176-44071234
64251 chr1 44071221 44071221 1 + G A rs631248 44071223 + 44071203 44071243 41 GTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGGA GTTCTACATTGTTGTGGTACCCATTGACCGTGTGGGCGGGA < 41bp 1 0.0607859670379911 1 0.108093500137329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071223 chr1:44071221 synonymous SNV . 0 19 hm5C_associated_SNPs_2775 0 0 2 SF3A3 POSTAR2 ENCODE chr1:44071176-44071234
64251 chr1 44087628 44087628 1 + G A rs141490430 44087609 + 44087589 44087629 41 GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGCTACCGT GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGCTACCAT < 41bp 1 0.355880805389725 1 0.485663563013077 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44087609 chr1:44087628 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_2776 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:44087620-44087639
64251 chr1 44087716 44087716 1 + C T rs368899845 44087702 + 44087682 44087722 41 TCCCCTCTCCTCCGCCACCCCCGCCGTGGGGCTCCGGAGGG TCCCCTCTCCTCCGCCACCCCCGCCGTGGGGCTCTGGAGGG < 41bp 1 0.250173848340385 1 0.523025095462799 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPRF ENSG00000142949 UTR3 Human protein_coding chr1:44087702 chr1:44087716 . . 0 35 hm5C_associated_SNPs_2777 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:44087707-44087736
64251 chr1 44087716 44087716 1 + C T rs368899845 44087703 + 44087683 44087723 41 CCCCTCTCCTCCGCCACCCCCGCCGTGGGGCTCCGGAGGGG CCCCTCTCCTCCGCCACCCCCGCCGTGGGGCTCTGGAGGGG < 41bp 1 0.62057608879165 1 0.865944981575012 experiment 0.7588478224167 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPRF ENSG00000142949 UTR3 Human protein_coding chr1:44087703 chr1:44087716 . . 0 34 hm5C_associated_SNPs_2778 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:44087707-44087736
64251 chr1 44087716 44087716 1 + C T rs368899845 44087705 + 44087685 44087725 41 CCTCTCCTCCGCCACCCCCGCCGTGGGGCTCCGGAGGGGAC CCTCTCCTCCGCCACCCCCGCCGTGGGGCTCTGGAGGGGAC < 41bp 1 0.183361995134406 1 0.536000907421112 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPRF ENSG00000142949 UTR3 Human protein_coding chr1:44087705 chr1:44087716 . . 0 32 hm5C_associated_SNPs_2779 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:44087707-44087736
64251 chr1 44087716 44087716 1 + C T rs368899845 44087706 + 44087686 44087726 41 CTCTCCTCCGCCACCCCCGCCGTGGGGCTCCGGAGGGGACC CTCTCCTCCGCCACCCCCGCCGTGGGGCTCTGGAGGGGACC < 41bp 1 0.310816352565644 1 0.345284461975098 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPRF ENSG00000142949 UTR3 Human protein_coding chr1:44087706 chr1:44087716 . . 0 31 hm5C_associated_SNPs_2780 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:44087707-44087736
64251 chr1 44446798 44446798 1 + C T rs141394710 44446804 + 44446784 44446824 41 AGCAGCCGGATGCCCGGGCCCACTGGGCGGGCCAGTGGCCG AGCAGCCGGATGCCTGGGCCCACTGGGCGGGCCAGTGGCCG < 41bp 1 0.617171668647554 1 0.134473651647568 experiment 0.765656662704892 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446804 chr1:44446798 nonsynonymous SNV 0.973 0 15 hm5C_associated_SNPs_2781 0 0 4 CDC40 POSTAR2 ENCODE chr1:44446714-44446809
64251 chr1 45116466 45116466 1 + G A rs374199001 45116468 + 45116448 45116488 41 GCTATCTGCCCCAGGCAGGCCTCGCCTCCAGCAGCCCCACC GCTATCTGCCCCAGGCAGACCTCGCCTCCAGCAGCCCCACC < 41bp 1 0.629063476154961 1 0.338775813579559 experiment 0.741873047690078 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45116468 chr1:45116466 . . 0 19 hm5C_associated_SNPs_2782 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:45116466-45116467
64251 chr1 45116466 45116466 1 + G A rs374199001 45116470 + 45116450 45116490 41 TATCTGCCCCAGGCAGGCCTCGCCTCCAGCAGCCCCACCTG TATCTGCCCCAGGCAGACCTCGCCTCCAGCAGCCCCACCTG < 41bp 1 0.728079680579977 1 0.780966401100159 experiment 0.543840638840047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45116470 chr1:45116466 . . 0 17 hm5C_associated_SNPs_2783 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:45116466-45116467
64251 chr1 45117273 45117273 1 + C G rs564081025 45117290 + 45117270 45117310 41 TGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGTGATG TGTGGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGTGATG < 41bp 1 0.611731987592692 1 0.534039437770844 experiment 0.776536024814617 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45117290 chr1:45117273 . . 0 4 hm5C_associated_SNPs_2785 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45117198-45117342
64251 chr1 45117300 45117300 1 + G A rs2822 45117290 + 45117270 45117310 41 TGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGTGATG TGTCGTCTCCCCGACCCTCCCGTGGGCCCTATGGTGTGATG < 41bp 1 0.667175094749498 1 0.509091079235077 experiment 0.665649810501004 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45117290 chr1:45117300 . . 0 31 hm5C_associated_SNPs_2786 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45117198-45117342
64251 chr1 45241254 45241254 1 + A G rs550212070 45241253 + 45241233 45241273 41 ATCTTTGCGGTTTCTCTTTCCAGCCAGCGCCGAGCGATGGG ATCTTTGCGGTTTCTCTTTCCGGCCAGCGCCGAGCGATGGG < 41bp 1 0.528931658118861 1 0.737863123416901 experiment 0.942136683762279 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RPS8 ENSG00000225721 ncRNA_exonic Human antisense chr1:45241253 chr1:45241254 . . 0 22 hm5C_associated_SNPs_2787 0 0 11 RTCB POSTAR2 GSE38201,GSM936508 chr1:45241231-45241259
64251 chr1 45241254 45241254 1 + A G rs550212070 45241260 + 45241240 45241280 41 CGGTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGTGAGTGT CGGTTTCTCTTTCCGGCCAGCGCCGAGCGATGGGTGAGTGT < 41bp 1 0.611830142289394 1 0.451420187950134 experiment 0.776339715421213 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS8 ENSG00000225721 ncRNA_exonic Human antisense chr1:45241260 chr1:45241254 . . 0 15 hm5C_associated_SNPs_2788 0 0 11 RTCB POSTAR2 GSE38201,GSM936508 chr1:45241231-45241259
64251 chr1 45241268 45241268 1 + G A rs74070602 45241253 + 45241233 45241273 41 ATCTTTGCGGTTTCTCTTTCCAGCCAGCGCCGAGCGATGGG ATCTTTGCGGTTTCTCTTTCCAGCCAGCGCCGAGCAATGGG < 41bp 1 0.451061776946286 1 0.404592961072922 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RPS8 ENSG00000225721 ncRNA_exonic Human antisense chr1:45241253 chr1:45241268 . . 0 36 hm5C_associated_SNPs_2789 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45241235-45241273
64251 chr1 45241268 45241268 1 + G A rs74070602 45241260 + 45241240 45241280 41 CGGTTTCTCTTTCCAGCCAGCGCCGAGCGATGGGTGAGTGT CGGTTTCTCTTTCCAGCCAGCGCCGAGCAATGGGTGAGTGT < 41bp 1 0.585421153362095 1 0.448462724685669 experiment 0.82915769327581 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS8 ENSG00000225721 ncRNA_exonic Human antisense chr1:45241260 chr1:45241268 . . 0 29 hm5C_associated_SNPs_2790 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45241235-45241273
64251 chr1 45241587 45241587 1 + G A rs41269073 45241568 + 45241548 45241588 41 CAACTCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGGGA CAACTCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGGAA < 41bp 1 0.302600774846513 1 0.118364840745926 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241568 chr1:45241587 . . 0 40 hm5C_associated_SNPs_2791 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241572 + 45241552 45241592 41 TCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGGGAAGCC TCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGGAAAGCC < 41bp 1 0.627849710182817 1 0.66996306180954 experiment 0.744300579634366 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241572 chr1:45241587 . . 0 36 hm5C_associated_SNPs_2792 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241578 + 45241558 45241598 41 ATGCTGCATACTCCCGAGTGCGCGGTGGGGAAGCCAACCTT ATGCTGCATACTCCCGAGTGCGCGGTGGGAAAGCCAACCTT < 41bp 1 0.774359598024388 1 0.239521384239197 experiment 0.451280803951224 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241578 chr1:45241587 . . 0 30 hm5C_associated_SNPs_2793 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241580 + 45241560 45241600 41 GCTGCATACTCCCGAGTGCGCGGTGGGGAAGCCAACCTTGG GCTGCATACTCCCGAGTGCGCGGTGGGAAAGCCAACCTTGG < 41bp 1 0.667877927450238 1 0.600303292274475 experiment 0.664244145099524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241580 chr1:45241587 . . 0 28 hm5C_associated_SNPs_2794 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241591 + 45241571 45241611 41 CCGAGTGCGCGGTGGGGAAGCCAACCTTGGAGAGCTGAGCG CCGAGTGCGCGGTGGGAAAGCCAACCTTGGAGAGCTGAGCG < 41bp 1 0.180793619477475 1 0.243176758289337 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241591 chr1:45241587 . . 0 17 hm5C_associated_SNPs_2795 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241595 + 45241575 45241615 41 GTGCGCGGTGGGGAAGCCAACCTTGGAGAGCTGAGCGTGCG GTGCGCGGTGGGAAAGCCAACCTTGGAGAGCTGAGCGTGCG < 41bp 1 0.128666644770157 1 0.0646465420722961 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241595 chr1:45241587 . . 0 13 hm5C_associated_SNPs_2796 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45241587 45241587 1 + G A rs41269073 45241605 + 45241585 45241625 41 GGGAAGCCAACCTTGGAGAGCTGAGCGTGCGACCGGCCCGG GGAAAGCCAACCTTGGAGAGCTGAGCGTGCGACCGGCCCGG < 41bp 1 0.604674084814701 1 0.0591348707675934 experiment 0.790651830370598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD55 ENSG00000264294 ncRNA_exonic Human snoRNA chr1:45241605 chr1:45241587 . . 0 3 hm5C_associated_SNPs_2797 0 0 21 FBL POSTAR2 GSE43666,GSM1067865 chr1:45241516-45241615
64251 chr1 45242241 45242241 1 + C A rs377221663 45242222 + 45242202 45242242 41 CCGTCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGACT CCGTCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGAAT < 41bp 1 0.088519399822264 1 0.0854395031929016 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242222 chr1:45242241 . . 0 40 hm5C_associated_SNPs_2798 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242223 + 45242203 45242243 41 CGTCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGACTT CGTCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGAATT < 41bp 1 0.085582021237864 1 0.037137359380722 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242223 chr1:45242241 . . 0 39 hm5C_associated_SNPs_2799 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242225 + 45242205 45242245 41 TCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGACTTGT TCTTGGTCACCTGTGTGCCACTTGCCAATGCAAGGAATTGT < 41bp 1 0.101058980074407 1 0.0359610915184021 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242225 chr1:45242241 . . 0 37 hm5C_associated_SNPs_2800 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242229 + 45242209 45242249 41 GGTCACCTGTGTGCCACTTGCCAATGCAAGGACTTGTCATA GGTCACCTGTGTGCCACTTGCCAATGCAAGGAATTGTCATA < 41bp 1 0.204811415488608 1 0.103399157524109 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242229 chr1:45242241 . . 0 33 hm5C_associated_SNPs_2801 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242230 + 45242210 45242250 41 GTCACCTGTGTGCCACTTGCCAATGCAAGGACTTGTCATAG GTCACCTGTGTGCCACTTGCCAATGCAAGGAATTGTCATAG < 41bp 1 0.369775720974019 1 0.338373422622681 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242230 chr1:45242241 . . 0 32 hm5C_associated_SNPs_2802 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242235 + 45242215 45242255 41 CTGTGTGCCACTTGCCAATGCAAGGACTTGTCATAGTTACA CTGTGTGCCACTTGCCAATGCAAGGAATTGTCATAGTTACA < 41bp 1 0.527510869655693 1 0.311053544282913 experiment 0.944978260688613 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242235 chr1:45242241 . . 0 27 hm5C_associated_SNPs_2803 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242246 + 45242226 45242266 41 TTGCCAATGCAAGGACTTGTCATAGTTACACTGACTGTTGC TTGCCAATGCAAGGAATTGTCATAGTTACACTGACTGTTGC < 41bp 1 0.499553424467317 1 0.549023568630219 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242246 chr1:45242241 . . 0 16 hm5C_associated_SNPs_2804 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242241 45242241 1 + C A rs377221663 45242260 + 45242240 45242280 41 ACTTGTCATAGTTACACTGACTGTTGCCTCCTCCCGGCCCA AATTGTCATAGTTACACTGACTGTTGCCTCCTCCCGGCCCA < 41bp 1 0.348112217237537 1 0.0569844245910645 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242260 chr1:45242241 . . 0 2 hm5C_associated_SNPs_2805 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:45242221-45242244
64251 chr1 45242255 45242255 1 + A G rs541727514 45242235 + 45242215 45242255 41 CTGTGTGCCACTTGCCAATGCAAGGACTTGTCATAGTTACA CTGTGTGCCACTTGCCAATGCAAGGACTTGTCATAGTTACG < 41bp 1 0.492052304348857 1 0.309055864810944 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242235 chr1:45242255 . . 0 41 hm5C_associated_SNPs_2806 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:45242150-45242290
64251 chr1 45242255 45242255 1 + A G rs541727514 45242241 + 45242221 45242261 41 GCCACTTGCCAATGCAAGGACTTGTCATAGTTACACTGACT GCCACTTGCCAATGCAAGGACTTGTCATAGTTACGCTGACT < 41bp 1 0.155867480017086 1 0.19263020157814 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242241 chr1:45242255 . . 0 35 hm5C_associated_SNPs_2807 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:45242150-45242290
64251 chr1 45242255 45242255 1 + A G rs541727514 45242246 + 45242226 45242266 41 TTGCCAATGCAAGGACTTGTCATAGTTACACTGACTGTTGC TTGCCAATGCAAGGACTTGTCATAGTTACGCTGACTGTTGC < 41bp 1 0.472008490944456 1 0.498896896839142 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242246 chr1:45242255 . . 0 30 hm5C_associated_SNPs_2808 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:45242150-45242290
64251 chr1 45242255 45242255 1 + A G rs541727514 45242260 + 45242240 45242280 41 ACTTGTCATAGTTACACTGACTGTTGCCTCCTCCCGGCCCA ACTTGTCATAGTTACGCTGACTGTTGCCTCCTCCCGGCCCA < 41bp 1 0.424753005743334 1 0.0314220786094666 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD46 ENSG00000200913 ncRNA_exonic Human snoRNA chr1:45242260 chr1:45242255 . . 0 16 hm5C_associated_SNPs_2809 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:45242150-45242290
64251 chr1 45243546 45243546 1 + A G rs76870991 45243531 + 45243511 45243551 41 GCCTTCTCGTGATGAAAACTCTGTCCAGTTCTGCTACTGAA GCCTTCTCGTGATGAAAACTCTGTCCAGTTCTGCTGCTGAA < 41bp 1 0.245266957575151 1 0.148018598556519 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD38A ENSG00000202031 ncRNA_exonic Human snoRNA chr1:45243531 chr1:45243546 . . 0 36 hm5C_associated_SNPs_2810 0 0 71 HNRNPC POSTAR2 SRX1438577 chr1:45243500-45243560
64251 chr1 45243546 45243546 1 + A G rs76870991 45243544 + 45243524 45243564 41 GAAAACTCTGTCCAGTTCTGCTACTGAAGGGAGAGAGATGA GAAAACTCTGTCCAGTTCTGCTGCTGAAGGGAGAGAGATGA < 41bp 1 0.277614988169867 1 0.297598958015442 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD38A ENSG00000202031 ncRNA_exonic Human snoRNA chr1:45243544 chr1:45243546 . . 0 23 hm5C_associated_SNPs_2811 0 0 71 HNRNPC POSTAR2 SRX1438577 chr1:45243500-45243560
64251 chr1 45243546 45243546 1 + A G rs76870991 45243547 + 45243527 45243567 41 AACTCTGTCCAGTTCTGCTACTGAAGGGAGAGAGATGAGAG AACTCTGTCCAGTTCTGCTGCTGAAGGGAGAGAGATGAGAG < 41bp 1 0.615077118069518 1 0.472555100917816 experiment 0.769845763860963 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD38A ENSG00000202031 ncRNA_exonic Human snoRNA chr1:45243547 chr1:45243546 . . 0 20 hm5C_associated_SNPs_2812 0 0 71 HNRNPC POSTAR2 SRX1438577 chr1:45243500-45243560
64251 chr1 45267302 45267302 1 + C A rs140199593 45267317 + 45267297 45267337 41 CTGGCCCACATCTGGAAGGCCCGGCACACCCTGTTGGAGCC CTGGCACACATCTGGAAGGCCCGGCACACCCTGTTGGAGCC < 41bp 1 0.256386456940148 1 0.539131283760071 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267317 chr1:45267302 synonymous SNV . 0 6 hm5C_associated_SNPs_2813 0 0 1 PRPF8 POSTAR2 ENCODE chr1:45267259-45267329
64251 chr1 45270024 45270024 1 + G A rs11211036 45270016 + 45269996 45270036 41 CCTCTCCCATGACAGCGGAACAGAACCCGGCCCCCCTGGCC CCTCTCCCATGACAGCGGAACAGAACCCAGCCCCCCTGGCC < 41bp 1 0.599613530653705 1 0.545477628707886 experiment 0.80077293869259 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45270016 chr1:45270024 synonymous SNV . 0 29 hm5C_associated_SNPs_2814 0 0 7 EFTUD2 POSTAR2 ENCODE chr1:45270006-45270032
64251 chr1 45479709 45479709 1 + A G rs2228084 45479707 + 45479687 45479727 41 TCCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTG TCCTCACTGATGCTCTGGTCCCGTATCTGGTAGGACAAGTG < 41bp 1 0.380126084857442 1 0.0864208042621613 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479707 chr1:45479709 synonymous SNV . 0 23 hm5C_associated_SNPs_2815 2 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45479684-45479723
64251 chr1 45479709 45479709 1 + A G rs2228084 45479708 + 45479688 45479728 41 CCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTGG CCTCACTGATGCTCTGGTCCCGTATCTGGTAGGACAAGTGG < 41bp 1 0.318788745423037 1 0.159823358058929 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479708 chr1:45479709 synonymous SNV . 0 22 hm5C_associated_SNPs_2816 2 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45479684-45479723
64251 chr1 45975197 45975197 1 + G A rs146159774 45975198 + 45975178 45975218 41 TGGGTTCAAGCAATTATCTGCCTCAGCCTCCTGAGTAGCTG TGGGTTCAAGCAATTATCTACCTCAGCCTCCTGAGTAGCTG < 41bp 1 0.190060873817154 1 0.0330477058887482 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMACHC ENSG00000132763 UTR3 Human protein_coding chr1:45975198 chr1:45975197 . . 0 20 hm5C_associated_SNPs_2824 1 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:45975180-45975200
64251 chr1 45975197 45975197 1 + G A rs146159774 45975208 + 45975188 45975228 41 CAATTATCTGCCTCAGCCTCCTGAGTAGCTGGGATGACAGG CAATTATCTACCTCAGCCTCCTGAGTAGCTGGGATGACAGG < 41bp 1 0.405078951636053 1 0.194563269615173 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMACHC ENSG00000132763 UTR3 Human protein_coding chr1:45975208 chr1:45975197 . . 0 10 hm5C_associated_SNPs_2825 1 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:45975180-45975200
64251 chr1 46016687 46016687 1 + T C rs9147 46016668 + 46016648 46016688 41 GGGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCCTTTA GGGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCCTTCA < 41bp 1 0.47091002005146 1 0.285261988639832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKR1A1 ENSG00000117448 UTR5 Human protein_coding chr1:46016668 chr1:46016687 . . 0 40 hm5C_associated_SNPs_2826 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:46016680-46016700
64251 chr1 46016736 46016736 1 + C T rs885755 46016728 + 46016708 46016748 41 CCTCCGGGTGGAACTTCCCCCTCACCGCCAGACTTAAGCTG CCTCCGGGTGGAACTTCCCCCTCACCGCTAGACTTAAGCTG < 41bp 1 0.321014323235359 1 0.09308722615242 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1A1 ENSG00000117448 UTR5 Human protein_coding chr1:46016728 chr1:46016736 . . 0 29 hm5C_associated_SNPs_2827 0 0 18 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:46016701-46016739
64251 chr1 46016736 46016736 1 + C T rs885755 46016732 + 46016712 46016752 41 CGGGTGGAACTTCCCCCTCACCGCCAGACTTAAGCTGAGGA CGGGTGGAACTTCCCCCTCACCGCTAGACTTAAGCTGAGGA < 41bp 1 0.234050358983179 1 0.194869220256805 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1A1 ENSG00000117448 UTR5 Human protein_coding chr1:46016732 chr1:46016736 . . 0 25 hm5C_associated_SNPs_2828 0 0 18 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:46016701-46016739
64251 chr1 46077263 46077263 1 + C T rs142405185 46077276 + 46077256 46077296 41 CGCCTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACG CGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCACCACG < 41bp 1 0.408915967423991 1 0.421772003173828 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NASP ENSG00000132780 intronic Human protein_coding chr1:46077276 chr1:46077263 . . 0 8 hm5C_associated_SNPs_2840 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46077220-46077279
64251 chr1 46077263 46077263 1 + C T rs142405185 46077279 + 46077259 46077299 41 CTCCCGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCT CTCCTGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCT < 41bp 1 0.647668319029211 1 0.659355700016022 experiment 0.704663361941577 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NASP ENSG00000132780 intronic Human protein_coding chr1:46077279 chr1:46077263 . . 0 5 hm5C_associated_SNPs_2841 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46077220-46077279
64251 chr1 46077263 46077263 1 + C T rs142405185 46077283 + 46077263 46077303 41 CGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCTGGCT TGAGTAGCTGGGACTACAGGCATGTGCCACCACGCCTGGCT < 41bp 1 0.205628894067508 1 0.688117861747742 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NASP ENSG00000132780 intronic Human protein_coding chr1:46077283 chr1:46077263 . . 0 1 hm5C_associated_SNPs_2842 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46077220-46077279
64251 chr1 46739327 46739327 1 + G A rs28363239 46739322 + 46739302 46739342 41 TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGT TGCTGGTCCTGGATTATATTCTGGCAGTGACCCGAAGCCGT < 41bp 1 0.600158543800808 1 0.37013965845108 experiment 0.799682912398384 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739322 chr1:46739327 synonymous SNV . 0 26 hm5C_associated_SNPs_2843 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:46739299-46739346
64251 chr1 46739814 46739814 1 + T C rs17102097 46739819 + 46739799 46739839 41 TCCCCCTTCAGGTACTTATACGTCCGCCTGGATGGCACGAT TCCCCCTTCAGGTACCTATACGTCCGCCTGGATGGCACGAT < 41bp 1 0.147296025900437 1 0.125300168991089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739819 chr1:46739814 synonymous SNV . 0 16 hm5C_associated_SNPs_2844 0 0 12 U2AF2 POSTAR2 GSE83923,CSM2221662 chr1:46739813-46739814
64251 chr1 46827416 46827416 1 + A G rs566394939 46827413 + 46827393 46827433 41 TTCCGAAGGGTTTTCATGGACACATTTTGTTTCTTCTCATC TTCCGAAGGGTTTTCATGGACACGTTTTGTTTCTTCTCATC < 41bp 1 0.641521158487205 1 0.0473441183567047 experiment 0.716957683025591 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46827413 chr1:46827416 synonymous SNV . 0 24 hm5C_associated_SNPs_2845 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46827384-46827453
64251 chr1 51434603 51434603 1 + T C rs3176451 51434619 + 51434599 51434639 41 GGGGTGAAAGGAGCAGGGACCGGCGATCTAGGGGGGGATCA GGGGCGAAAGGAGCAGGGACCGGCGATCTAGGGGGGGATCA < 41bp 1 0.752525832208298 1 0.808429598808289 experiment 0.494948335583405 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDKN2C ENSG00000123080 UTR5 Human protein_coding chr1:51434619 chr1:51434603 . . 0 5 hm5C_associated_SNPs_2847 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:51434597-51434637
64251 chr1 51434863 51434863 1 + A C rs138559346 51434855 + 51434835 51434875 41 CTGCCCCGGAACTGCGGCGACTCTCCCTACTCAGAACTTGG CTGCCCCGGAACTGCGGCGACTCTCCCTCCTCAGAACTTGG < 41bp 1 0.111058926485963 1 0.0309658348560333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDKN2C ENSG00000123080 UTR5 Human protein_coding chr1:51434855 chr1:51434863 . . 0 29 hm5C_associated_SNPs_2848 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:51434851-51434870
64251 chr1 51434863 51434863 1 + A C rs138559346 51434857 + 51434837 51434877 41 GCCCCGGAACTGCGGCGACTCTCCCTACTCAGAACTTGGCC GCCCCGGAACTGCGGCGACTCTCCCTCCTCAGAACTTGGCC < 41bp 1 0.339047071500115 1 0.320804357528687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDKN2C ENSG00000123080 UTR5 Human protein_coding chr1:51434857 chr1:51434863 . . 0 27 hm5C_associated_SNPs_2849 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:51434851-51434870
64251 chr1 51701956 51701956 1 + C A rs72896451 51701973 + 51701953 51701993 41 AGCCGGCCTCGTTCTGGCTGCCGCCGTCTCGCTGAGGCGGA AGCAGGCCTCGTTCTGGCTGCCGCCGTCTCGCTGAGGCGGA < 41bp 1 0.480432479401997 1 0.192568570375443 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51701973 chr1:51701956 . . 0 4 hm5C_associated_SNPs_2850 0 0 1 DDX3X POSTAR2 ENCODE chr1:51701944-51702045
64251 chr1 51701980 51701980 1 + C G rs571851078 51701973 + 51701953 51701993 41 AGCCGGCCTCGTTCTGGCTGCCGCCGTCTCGCTGAGGCGGA AGCCGGCCTCGTTCTGGCTGCCGCCGTGTCGCTGAGGCGGA < 41bp 1 0.506528965160906 1 0.315492153167725 experiment 0.986942069678188 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51701973 chr1:51701980 . . 0 28 hm5C_associated_SNPs_2851 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:51701980-51702000
64251 chr1 51702198 51702198 1 + G A rs574881567 51702178 + 51702158 51702198 41 CTTCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAG CTTCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAA < 41bp 1 0.513609522630516 1 0.245699405670166 experiment 0.972780954738968 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702178 chr1:51702198 . . 0 41 hm5C_associated_SNPs_2852 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 51702198 51702198 1 + G A rs574881567 51702179 + 51702159 51702199 41 TTCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAGG TTCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAAG < 41bp 1 0.404685249308492 1 0.406878441572189 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702179 chr1:51702198 . . 0 40 hm5C_associated_SNPs_2853 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 51702198 51702198 1 + G A rs574881567 51702180 + 51702160 51702200 41 TCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAGGA TCGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAAGA < 41bp 1 0.692669765531991 1 0.401851177215576 experiment 0.614660468936019 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702180 chr1:51702198 . . 0 39 hm5C_associated_SNPs_2854 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 51702198 51702198 1 + G A rs574881567 51702181 + 51702161 51702201 41 CGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAGGAG CGTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAAGAG < 41bp 1 0.454602801055355 1 0.138167440891266 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702181 chr1:51702198 . . 0 38 hm5C_associated_SNPs_2855 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 51702198 51702198 1 + G A rs574881567 51702182 + 51702162 51702202 41 GTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAGGAGG GTCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAAGAGG < 41bp 1 0.33646023342788 1 0.20307320356369 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702182 chr1:51702198 . . 0 37 hm5C_associated_SNPs_2856 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 51702198 51702198 1 + G A rs574881567 51702183 + 51702163 51702203 41 TCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAGGAGGC TCTCCCCGCCCCCCCCCCCCCATCGCTGCCTCGCAAGAGGC < 41bp 1 0.757248448833861 1 0.298622488975525 experiment 0.485503102332278 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF11 ENSG00000123091 UTR5 Human protein_coding chr1:51702183 chr1:51702198 . . 0 36 hm5C_associated_SNPs_2857 0 0 2 DDX3X POSTAR2 ENCODE chr1:51702184-51702236
64251 chr1 53676448 53676448 1 + G A rs1799821 53676443 + 53676423 53676463 41 TATCGCCAAGGATGGCTCTACTGCCGTCCACTTTGAGCACT TATCGCCAAGGATGGCTCTACTGCCATCCACTTTGAGCACT < 41bp 1 0.341882462844367 1 0.110030710697174 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676443 chr1:53676448 nonsynonymous SNV 0.594 1 26 hm5C_associated_SNPs_2859 3 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:53676442-53676460
64251 chr1 54678305 54678305 1 + C G rs2275408 54678323 + 54678303 54678343 41 CCCTGGCTCAGGCCCGGCTCCTCTATGGGGTATGTAGGTGG CCGTGGCTCAGGCCCGGCTCCTCTATGGGGTATGTAGGTGG < 41bp 1 0.662797740216002 1 0.82034957408905 experiment 0.674404519567996 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54678323 chr1:54678305 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_2860 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:54678274-54678326
64251 chr1 55208168 55208168 1 + G A rs146616469 55208169 + 55208149 55208189 41 ACACATTTCCCACAGAGGAGCCGTTCCATGGAGCCGAGCTA ACACATTTCCCACAGAGGAACCGTTCCATGGAGCCGAGCTA < 41bp 1 0.186010005024495 1 0.072713315486908 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MROH7-TTC4 ENSG00000243725 UTR3 Human protein_coding chr1:55208169 chr1:55208168 . . 0 20 hm5C_associated_SNPs_2863 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr1:55208162-55208187
64251 chr1 55524222 55524222 1 + C T rs141502002 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACATGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG < 41bp 1 0.168545791997513 1 0.10378897190094 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524222 nonsynonymous SNV 0.003 2 8 hm5C_associated_SNPs_2865 3 0 8 DDX6 POSTAR2 ENCODE chr1:55524184-55524224
64251 chr1 55524222 55524222 1 + C T rs141502002 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACATGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA < 41bp 1 0.502398332737606 1 0.198266088962555 experiment 0.995203334524789 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524222 nonsynonymous SNV 0.003 2 7 hm5C_associated_SNPs_2866 3 0 8 DDX6 POSTAR2 ENCODE chr1:55524184-55524224
64251 chr1 55524237 55524237 1 + G A rs562556 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGGCCACAGCCATCGCCCGCTGCGCCCCAG < 41bp 1 0.0842436065513793 1 0.0793194472789764 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524237 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_2867 3 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524237 55524237 1 + G A rs562556 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGGCCACAGCCATCGCCCGCTGCGCCCCAGA < 41bp 1 0.470897833471504 1 0.200772851705551 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524237 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_2868 3 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524248 55524248 1 + C T rs28362268 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGGCCACAGCCGTCGCCCGCTGTGCCCCAG < 41bp 1 0.140401040797392 1 0.23630428314209 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524248 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_2869 1 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524248 55524248 1 + C T rs28362268 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGGCCACAGCCGTCGCCCGCTGTGCCCCAGA < 41bp 1 0.535112025612918 1 0.402252674102783 experiment 0.929775948774163 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524248 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_2870 1 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55529489 55529489 1 + C T rs145330737 55529491 + 55529471 55529511 41 TGCCAGGAAGCTCCCTCCCTCACTGTGGGGCATTTCACCAT TGCCAGGAAGCTCCCTCCTTCACTGTGGGGCATTTCACCAT < 41bp 1 0.497765279152788 1 0.139269977807999 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCSK9 ENSG00000169174 UTR3 Human protein_coding chr1:55529491 chr1:55529489 . . 0 19 hm5C_associated_SNPs_2871 2 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:55529480-55529520
64251 chr1 57178966 57178966 1 + A G rs113848788 57178968 + 57178948 57178988 41 GCTGGGTCTAGAAGAGTTATCAGACTGTAGGCCTGTATTAA GCTGGGTCTAGAAGAGTTGTCAGACTGTAGGCCTGTATTAA < 41bp 1 0.502571867167024 1 0.448406249284744 experiment 0.994856265665953 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 UTR3 Human protein_coding chr1:57178968 chr1:57178966 . . 0 19 hm5C_associated_SNPs_2872 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:57178941-57178970
64251 chr1 60341205 60341205 1 + A G rs12756232 60341204 + 60341184 60341224 41 ATAAACATTTCATCTTGAACCATGATTTATACACATCTGTG ATAAACATTTCATCTTGAACCGTGATTTATACACATCTGTG < 41bp 1 0.622265630221544 1 0.0933361351490021 experiment 0.755468739556913 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HOOK1 ENSG00000134709 UTR3 Human protein_coding chr1:60341204 chr1:60341205 . . 0 22 hm5C_associated_SNPs_2874 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr1:60341180-60341207
64251 chr1 60341212 60341212 1 + A G rs370113171 60341204 + 60341184 60341224 41 ATAAACATTTCATCTTGAACCATGATTTATACACATCTGTG ATAAACATTTCATCTTGAACCATGATTTGTACACATCTGTG < 41bp 1 0.61063764063101 1 0.202769249677658 experiment 0.77872471873798 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HOOK1 ENSG00000134709 UTR3 Human protein_coding chr1:60341204 chr1:60341212 . . 0 29 hm5C_associated_SNPs_2875 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:60341207-60341229
64251 chr1 62455935 62455935 1 + A G rs77717948 62455922 + 62455902 62455942 41 GATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGA GATAAGAATGGACTTGGACTCAGCCTTGCTGGTGATAAAGA < 41bp 1 0.23787486029858 1 0.510276079177856 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62455922 chr1:62455935 nonsynonymous SNV 0.993 4 34 hm5C_associated_SNPs_2876 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:62455903-62455941
64251 chr1 62902820 62902820 1 + C A rs375113601 62902825 + 62902805 62902845 41 CGCTCCTGGCTCTCCCGGGGCGGGCGCAGATGGGCGCCGCT CGCTCCTGGCTCTCCAGGGGCGGGCGCAGATGGGCGCCGCT < 41bp 1 0.772040919955304 1 0.830171048641205 experiment 0.455918160089393 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control USP1 ENSG00000162607 UTR5 Human protein_coding chr1:62902825 chr1:62902820 . . 0 16 hm5C_associated_SNPs_2925 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:62902780-62902820
64251 chr1 65210972 65210972 1 + G A rs149969748 65210985 + 65210965 65211005 41 CGCACGAGGGCGCCCCGGACCCGATGCCCGCCGCGCTGCAC CGCACGAAGGCGCCCCGGACCCGATGCCCGCCGCGCTGCAC < 41bp 1 0.582630699441107 1 0.398282021284103 experiment 0.834738601117785 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65210985 chr1:65210972 synonymous SNV . 0 8 hm5C_associated_SNPs_2932 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:65210961-65211009
64251 chr1 67451279 67451279 1 + A G rs190115741 67451278 + 67451258 67451298 41 TTTGAAAGATTTTTACAGTACATATGTCTTGACTGAGCTGT TTTGAAAGATTTTTACAGTACGTATGTCTTGACTGAGCTGT < 41bp 1 0.145307586867372 1 0.0536746382713318 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIER1 ENSG00000198160 UTR3 Human protein_coding chr1:67451278 chr1:67451279 . . 0 22 hm5C_associated_SNPs_2934 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:67451229-67451355
64251 chr1 67451850 67451850 1 + A G rs183744278 67451868 + 67451848 67451888 41 CTAGTTACAATCCAATTTTTCAGATTTGATAATGCTTTTCC CTGGTTACAATCCAATTTTTCAGATTTGATAATGCTTTTCC < 41bp 1 0.324927978683063 1 0.312646597623825 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MIER1 ENSG00000198160 UTR3 Human protein_coding chr1:67451868 chr1:67451850 . . 0 3 hm5C_associated_SNPs_2935 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:67451816-67451851
64251 chr1 70687388 70687388 1 + T G rs575652474 70687374 + 70687354 70687394 41 GTCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGTGGTGGT GTCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGGGGTGGT < 41bp 1 0.748994742676042 1 0.531317234039307 experiment 0.502010514647916 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687374 chr1:70687388 synonymous SNV . 0 35 hm5C_associated_SNPs_2936 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:70687369-70687395
64251 chr1 70687388 70687388 1 + T G rs575652474 70687375 + 70687355 70687395 41 TCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGTGGTGGTG TCCGGGCCCCAGCGGCGGGCCCGGTGGCGGAGGGGGTGGTG < 41bp 1 0.75729395955928 1 0.479278415441513 experiment 0.485412080881439 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687375 chr1:70687388 synonymous SNV . 0 34 hm5C_associated_SNPs_2937 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:70687369-70687395
64251 chr1 70700416 70700416 1 + C G rs144286981 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CACTGGCTGCTTTGGGGGCTCCTAGTCTTGATCCTGCCCTT < 41bp 1 0.455865092130082 1 0.21676903963089 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700416 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_2938 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:70700379-70700423
64251 chr1 70716742 70716742 1 + A G rs536139755 70716724 + 70716704 70716744 41 TGAGTAACCAAGCAGTTTTACTATTCTGGTGCTGCTTCATA TGAGTAACCAAGCAGTTTTACTATTCTGGTGCTGCTTCGTA < 41bp 1 0.178936886512813 1 0.028674453496933 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SRSF11 ENSG00000116754 UTR3 Human protein_coding chr1:70716724 chr1:70716742 . . 0 39 hm5C_associated_SNPs_2939 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:70716363-70716795
64251 chr1 75214441 75214441 1 + A G rs1133891 75214439 + 75214419 75214459 41 TTTTATTTTCTTACAGCATTCCATGGCAATAGATTCTGGTT TTTTATTTTCTTACAGCATTCCGTGGCAATAGATTCTGGTT < 41bp 1 0.216088895804569 1 0.586026906967163 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TYW3 ENSG00000162623 CDS Human protein_coding chr1:75214439 chr1:75214441 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_2940 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:75214432-75214480
64251 chr1 75214441 75214441 1 + A G rs1133891 75214440 + 75214420 75214460 41 TTTATTTTCTTACAGCATTCCATGGCAATAGATTCTGGTTT TTTATTTTCTTACAGCATTCCGTGGCAATAGATTCTGGTTT < 41bp 1 0.350822486308169 1 0.450814247131348 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TYW3 ENSG00000162623 CDS Human protein_coding chr1:75214440 chr1:75214441 nonsynonymous SNV 0.986 0 22 hm5C_associated_SNPs_2941 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:75214432-75214480
64251 chr1 76253229 76253229 1 + T A rs3737573 76253245 + 76253225 76253265 41 ACACTTTGTTATTGGAGAAACATGCAGATTATATCGCATCC ACACATTGTTATTGGAGAAACATGCAGATTATATCGCATCC < 41bp 1 0.34928221048198 1 0.25756961107254 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76253245 chr1:76253229 synonymous SNV . 0 5 hm5C_associated_SNPs_2942 0 0 37 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:76253074-76253815
64251 chr1 76253607 76253607 1 + C T rs189490979 76253601 + 76253581 76253621 41 GATGTGTTGGCATGTATTATCTGAATCTATTGCTGATGTGT GATGTGTTGGCATGTATTATCTGAATTTATTGCTGATGTGT < 41bp 1 0.623478187521022 1 0.296581655740738 experiment 0.753043624957956 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD45A ENSG00000207241 ncRNA_exonic Human snoRNA chr1:76253601 chr1:76253607 . . 0 27 hm5C_associated_SNPs_2943 0 0 116 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:76253580-76253620
64251 chr1 76253607 76253607 1 + C T rs189490979 76253613 + 76253593 76253633 41 TGTATTATCTGAATCTATTGCTGATGTGTAATAACACTTTA TGTATTATCTGAATTTATTGCTGATGTGTAATAACACTTTA < 41bp 1 0.327048223995966 1 0.0638850629329681 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD45A ENSG00000207241 ncRNA_exonic Human snoRNA chr1:76253613 chr1:76253607 . . 0 15 hm5C_associated_SNPs_2944 0 0 116 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:76253580-76253620
64251 chr1 76255228 76255228 1 + G A rs11161620 76255231 + 76255211 76255251 41 TTCTAAAATTACACTGAGACCTTGGAGGGTAAAATTTTTAT TTCTAAAATTACACTGAAACCTTGGAGGGTAAAATTTTTAT < 41bp 1 0.327661267687452 1 0.217123329639435 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD45B ENSG00000201487 ncRNA_exonic Human snoRNA chr1:76255231 chr1:76255228 . . 0 18 hm5C_associated_SNPs_2945 0 1 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:76255210-76255232
64251 chr1 78470893 78470893 1 + G A rs148334107 78470892 + 78470872 78470912 41 ACAAGCCCTCAAATTTCATCCGGACAAGAACAAATCTCCTC ACAAGCCCTCAAATTTCATCCAGACAAGAACAAATCTCCTC < 41bp 1 0.364088940439529 1 0.426190912723541 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78470892 chr1:78470893 synonymous SNV . 0 22 hm5C_associated_SNPs_2947 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:78470887-78470908
64251 chr1 86046594 86046594 1 + G T rs561065476 86046589 + 86046569 86046609 41 CCGCCACCCCGACCCCGCTGCGCACGGCCTGTCCGCTGCAC CCGCCACCCCGACCCCGCTGCGCACTGCCTGTCCGCTGCAC < 41bp 1 0.530309884768434 1 0.152325659990311 experiment 0.939380230463132 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYR61 ENSG00000142871 UTR5 Human protein_coding chr1:86046589 chr1:86046594 . . 0 26 hm5C_associated_SNPs_2948 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:86046571-86046599
64251 chr1 86047592 86047592 1 + C G rs9658585 86047608 + 86047588 86047628 41 TTCTCTTTTGGTGATCTTTGCAGCTCAGTCAGAGGGCAGAC TTCTGTTTTGGTGATCTTTGCAGCTCAGTCAGAGGGCAGAC < 41bp 1 0.268113016705559 1 0.171792179346085 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYR61 ENSG00000142871 intronic Human protein_coding chr1:86047608 chr1:86047592 . . 0 5 hm5C_associated_SNPs_2950 0 0 2 U2AF2 POSTAR2 GSE61603,GSM1509288 chr1:86047560-86047600
64251 chr1 86048579 86048579 1 + C A rs9658587 86048568 + 86048548 86048588 41 CACGCCCCAGCTGACCAGGACTGTGAAGATGCGGTTCCGCT CACGCCCCAGCTGACCAGGACTGTGAAGATGAGGTTCCGCT < 41bp 1 0.207802106452502 1 0.0363798439502716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048568 chr1:86048579 synonymous SNV 1.000 0 32 hm5C_associated_SNPs_2951 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048579 86048579 1 + C A rs9658587 86048584 + 86048564 86048604 41 AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAC AGGACTGTGAAGATGAGGTTCCGCTGCGAAGATGGGGAGAC < 41bp 1 0.391546928004598 1 0.147900432348251 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048584 chr1:86048579 synonymous SNV 1.000 0 16 hm5C_associated_SNPs_2952 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048579 86048579 1 + C A rs9658587 86048585 + 86048565 86048605 41 GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACA GGACTGTGAAGATGAGGTTCCGCTGCGAAGATGGGGAGACA < 41bp 1 0.436855002869636 1 0.18757438659668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048585 chr1:86048579 synonymous SNV 1.000 0 15 hm5C_associated_SNPs_2953 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048579 86048579 1 + C A rs9658587 86048587 + 86048567 86048607 41 ACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACATT ACTGTGAAGATGAGGTTCCGCTGCGAAGATGGGGAGACATT < 41bp 1 0.74669226509297 1 0.130950182676315 experiment 0.50661546981406 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048587 chr1:86048579 synonymous SNV 1.000 0 13 hm5C_associated_SNPs_2954 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 87794719 87794719 1 + G A rs182851533 87794724 + 87794704 87794744 41 CCGGCACTTACGCGGGGGCCCCCCAACCCGCCCCAGAGCAA CCGGCACTTACGCGGAGGCCCCCCAACCCGCCCCAGAGCAA < 41bp 1 0.559718024116626 1 0.403112679719925 experiment 0.880563951766747 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LMO4 ENSG00000143013 UTR5 Human protein_coding chr1:87794724 chr1:87794719 . . 0 16 hm5C_associated_SNPs_2955 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:87794673-87794733
64251 chr1 87794719 87794719 1 + G A rs182851533 87794726 + 87794706 87794746 41 GGCACTTACGCGGGGGCCCCCCAACCCGCCCCAGAGCAACG GGCACTTACGCGGAGGCCCCCCAACCCGCCCCAGAGCAACG < 41bp 1 0.183669789343835 1 0.41621321439743 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LMO4 ENSG00000143013 UTR5 Human protein_coding chr1:87794726 chr1:87794719 . . 0 14 hm5C_associated_SNPs_2956 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:87794673-87794733
64251 chr1 91980447 91980447 1 + A G rs483532 91980446 + 91980426 91980466 41 AAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAGTGCTG AAAAAAGAAGGCTATTTCTACGAAAGTTATGAATAGTGCTG < 41bp 1 0.700665806440268 1 0.397804975509644 experiment 0.598668387119464 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980446 chr1:91980447 synonymous SNV . 0 22 hm5C_associated_SNPs_2957 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:91980440-91980460
64251 chr1 91980461 91980461 1 + G A rs141732646 91980446 + 91980426 91980466 41 AAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAGTGCTG AAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAATGCTG < 41bp 1 0.646899924713888 1 0.239128202199936 experiment 0.706200150572223 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980446 chr1:91980461 nonsynonymous SNV 0.878 1 36 hm5C_associated_SNPs_2958 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:91980447-91980489
64251 chr1 93297610 93297610 1 + C A rs368663464 93297617 + 93297597 93297637 41 CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCT CCTTTTCCCACCCACTAGCGCCGCTGGGCCTGCAGGTCTCT < 41bp 1 0.329539026085926 1 0.0492813587188721 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297617 chr1:93297610 . . 0 14 hm5C_associated_SNPs_2959 0 0 42 CPSF2 POSTAR2 GSE37401,GSM917670 chr1:93297577-93297615
64251 chr1 93297620 93297620 1 + C G rs143326916 93297617 + 93297597 93297637 41 CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCT CCTTTTCCCACCCCCTAGCGCCGGTGGGCCTGCAGGTCTCT < 41bp 1 0.57385647532953 1 0.296470433473587 experiment 0.85228704934094 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297617 chr1:93297620 . . 0 24 hm5C_associated_SNPs_2960 1 0 57 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:93297580-93297640
64251 chr1 93297630 93297630 1 + A C rs145634330 93297617 + 93297597 93297637 41 CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCT CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCCGGTCTCT < 41bp 1 0.399073654187168 1 0.0635941326618195 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297617 chr1:93297630 . . 0 34 hm5C_associated_SNPs_2961 1 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93297628-93297656
64251 chr1 93297632 93297632 1 + G A rs569209548 93297617 + 93297597 93297637 41 CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCT CCTTTTCCCACCCCCTAGCGCCGCTGGGCCTGCAGATCTCT < 41bp 1 0.335893733351615 1 0.0633766949176788 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297617 chr1:93297632 . . 0 36 hm5C_associated_SNPs_2962 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93297628-93297656
64251 chr1 93302919 93302919 1 + T C rs77093817 93302899 + 93302879 93302919 41 AGTAGTTGGTCCTTTGGTTGCATATGATGCGATAATTGTTT AGTAGTTGGTCCTTTGGTTGCATATGATGCGATAATTGTTC < 41bp 1 0.0993475557847401 1 0.254331529140472 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD21 ENSG00000206680 ncRNA_exonic Human snoRNA chr1:93302899 chr1:93302919 . . 0 41 hm5C_associated_SNPs_2963 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93302900-93302920
64251 chr1 93302919 93302919 1 + T C rs77093817 93302908 + 93302888 93302928 41 TCCTTTGGTTGCATATGATGCGATAATTGTTTCAAGACGGG TCCTTTGGTTGCATATGATGCGATAATTGTTCCAAGACGGG < 41bp 1 0.196921076084825 1 0.346077442169189 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD21 ENSG00000206680 ncRNA_exonic Human snoRNA chr1:93302908 chr1:93302919 . . 0 32 hm5C_associated_SNPs_2964 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93302900-93302920
64251 chr1 93302919 93302919 1 + T C rs77093817 93302920 + 93302900 93302940 41 ATATGATGCGATAATTGTTTCAAGACGGGACTGATGGCAGC ATATGATGCGATAATTGTTCCAAGACGGGACTGATGGCAGC < 41bp 1 0.5042460922548 1 0.718651354312897 experiment 0.991507815490401 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD21 ENSG00000206680 ncRNA_exonic Human snoRNA chr1:93302920 chr1:93302919 . . 0 20 hm5C_associated_SNPs_2965 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93302900-93302920
64251 chr1 93302919 93302919 1 + T C rs77093817 93302925 + 93302905 93302945 41 ATGCGATAATTGTTTCAAGACGGGACTGATGGCAGCTACTA ATGCGATAATTGTTCCAAGACGGGACTGATGGCAGCTACTA < 41bp 1 0.700051073671454 1 0.62754613161087 experiment 0.599897852657092 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD21 ENSG00000206680 ncRNA_exonic Human snoRNA chr1:93302925 chr1:93302919 . . 0 15 hm5C_associated_SNPs_2966 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93302900-93302920
64251 chr1 93302919 93302919 1 + T C rs77093817 93302930 + 93302910 93302950 41 ATAATTGTTTCAAGACGGGACTGATGGCAGCTACTAAAGTA ATAATTGTTCCAAGACGGGACTGATGGCAGCTACTAAAGTA < 41bp 1 0.120450167903095 1 0.0968059003353119 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD21 ENSG00000206680 ncRNA_exonic Human snoRNA chr1:93302930 chr1:93302919 . . 0 10 hm5C_associated_SNPs_2967 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93302900-93302920
64251 chr1 93306281 93306281 1 + A G rs115931438 93306297 + 93306277 93306317 41 TGCAAACTCGATCACTAGCTCTGCGTGATGTGGCAGAAGCG TGCAGACTCGATCACTAGCTCTGCGTGATGTGGCAGAAGCG < 41bp 1 0.423531238415269 1 0.626516699790955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA66 ENSG00000207523 ncRNA_exonic Human snoRNA chr1:93306297 chr1:93306281 . . 0 5 hm5C_associated_SNPs_2968 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:93306244-93306282
64251 chr1 93306300 93306300 1 + C T rs183472088 93306297 + 93306277 93306317 41 TGCAAACTCGATCACTAGCTCTGCGTGATGTGGCAGAAGCG TGCAAACTCGATCACTAGCTCTGTGTGATGTGGCAGAAGCG < 41bp 1 0.222986037682465 1 0.474826514720917 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA66 ENSG00000207523 ncRNA_exonic Human snoRNA chr1:93306297 chr1:93306300 . . 0 24 hm5C_associated_SNPs_2969 0 0 31 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:93306260-93306380
64251 chr1 93306317 93306317 1 + G A rs10874744 93306297 + 93306277 93306317 41 TGCAAACTCGATCACTAGCTCTGCGTGATGTGGCAGAAGCG TGCAAACTCGATCACTAGCTCTGCGTGATGTGGCAGAAGCA < 41bp 1 0.395552631897164 1 0.613755404949188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA66 ENSG00000207523 ncRNA_exonic Human snoRNA chr1:93306297 chr1:93306317 . . 0 41 hm5C_associated_SNPs_2970 1 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:93306260-93306380
64251 chr1 93307423 93307423 1 + A G rs11540833 93307419 + 93307399 93307439 41 CAGGAGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTAT CAGGAGCGGGCTGCTGAGAGCTAAGCCCAGCAATTTTCTAT < 41bp 1 0.329967296720746 1 0.175529181957245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL5 ENSG00000122406 UTR3 Human protein_coding chr1:93307419 chr1:93307423 . . 0 25 hm5C_associated_SNPs_2971 0 0 78 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:93307331-93307473
64251 chr1 93812081 93812081 1 + C T rs111741199 93812080 + 93812060 93812100 41 CCTCCGTTCATTTTCTGCACCCTCTTCGCAAAGCACCCCCC CCTCCGTTCATTTTCTGCACCTTCTTCGCAAAGCACCCCCC < 41bp 1 0.400086774426312 1 0.033464640378952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93812080 chr1:93812081 . . 0 22 hm5C_associated_SNPs_2972 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:93811901-93812088
64251 chr1 93812081 93812081 1 + C T rs111741199 93812086 + 93812066 93812106 41 TTCATTTTCTGCACCCTCTTCGCAAAGCACCCCCCGGGATC TTCATTTTCTGCACCTTCTTCGCAAAGCACCCCCCGGGATC < 41bp 1 0.64561851032948 1 0.50742644071579 experiment 0.70876297934104 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93812086 chr1:93812081 . . 0 16 hm5C_associated_SNPs_2973 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:93811901-93812088
64251 chr1 93812081 93812081 1 + C T rs111741199 93812093 + 93812073 93812113 41 TCTGCACCCTCTTCGCAAAGCACCCCCCGGGATCACTCTCC TCTGCACCTTCTTCGCAAAGCACCCCCCGGGATCACTCTCC < 41bp 1 0.530381290304352 1 0.0326409637928009 experiment 0.939237419391296 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93812093 chr1:93812081 . . 0 9 hm5C_associated_SNPs_2974 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:93811901-93812088
64251 chr1 93826455 93826455 1 + G A rs8561 93826454 + 93826434 93826474 41 TATGAAATTTTAGATAGCAGCGAGTCCTTCGTTTGATCAAT TATGAAATTTTAGATAGCAGCAAGTCCTTCGTTTGATCAAT < 41bp 1 0.332533194331685 1 0.378315627574921 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DR1 ENSG00000117505 UTR3 Human protein_coding chr1:93826454 chr1:93826455 . . 0 22 hm5C_associated_SNPs_2975 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:93826345-93826462
64251 chr1 94884005 94884005 1 + C G rs369326473 94883994 + 94883974 94884014 41 GGTAGCCGCCGCCGCCGCCGCCGCCGCGTCCCCTCGCCGGC GGTAGCCGCCGCCGCCGCCGCCGCCGCGTCCGCTCGCCGGC < 41bp 1 0.744443180190002 1 0.734949350357056 experiment 0.511113639619995 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCD3 ENSG00000117528 UTR5 Human protein_coding chr1:94883994 chr1:94884005 . . 0 32 hm5C_associated_SNPs_2977 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:94884000-94884040
64251 chr1 94953157 94953157 1 + T C rs139507691 94953142 + 94953122 94953162 41 TTGTTTCGGTTTTCAATGGGCTTCATTGATAGTATTATTGC TTGTTTCGGTTTTCAATGGGCTTCATTGATAGTATCATTGC < 41bp 1 0.424571492631653 1 0.134978860616684 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94953142 chr1:94953157 synonymous SNV . 0 36 hm5C_associated_SNPs_2978 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:94953131-94953195
64251 chr1 100740485 100740485 1 + T C rs116538743 100740467 + 100740447 100740487 41 ATAAATTTAACTGAGCGTGGCTGTGTGACTAAGATATATGG ATAAATTTAACTGAGCGTGGCTGTGTGACTAAGATATACGG < 41bp 1 0.263087040549674 1 0.176771849393845 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100740467 chr1:100740485 synonymous SNV . 0 39 hm5C_associated_SNPs_2979 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:100740447-100740485
64251 chr1 109181451 109181451 1 + G A rs147535154 109181446 + 109181426 109181466 41 AAAGGCCTTATTCCCTTACACATGCGATTTTTGTAAGATAA AAAGGCCTTATTCCCTTACACATGCAATTTTTGTAAGATAA < 41bp 1 0.163323838769904 1 0.24698480963707 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM102B ENSG00000162636 UTR3 Human protein_coding chr1:109181446 chr1:109181451 . . 0 26 hm5C_associated_SNPs_2982 0 0 9 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:109181386-109181474
64251 chr1 109325301 109325301 1 + A G rs201792987 109325284 + 109325264 109325304 41 TTGACAGGGAAATTCCCAAGCTTATGAAAGAAATTTCATCA TTGACAGGGAAATTCCCAAGCTTATGAAAGAAATTTCGTCA < 41bp 1 0.199584564891104 1 0.0809610784053802 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109325284 chr1:109325301 synonymous SNV . 0 38 hm5C_associated_SNPs_2983 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:109325286-109325307
64251 chr1 109801286 109801286 1 + C T rs201291428 109801267 + 109801247 109801287 41 CGTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCA CGTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTTA < 41bp 1 0.0737217883043834 1 0.0676095485687256 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801267 chr1:109801286 synonymous SNV . 0 40 hm5C_associated_SNPs_2988 0 0 2 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801286 109801286 1 + C T rs201291428 109801268 + 109801248 109801288 41 GTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAA GTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTTAA < 41bp 1 0.28340788021354 1 0.571582913398743 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801268 chr1:109801286 synonymous SNV . 0 39 hm5C_associated_SNPs_2989 0 0 2 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801286 109801286 1 + C T rs201291428 109801269 + 109801249 109801289 41 TACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAAC TACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTTAAC < 41bp 1 0.286536870764748 1 0.461908608675003 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801269 chr1:109801286 synonymous SNV . 0 38 hm5C_associated_SNPs_2990 0 0 2 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801286 109801286 1 + C T rs201291428 109801270 + 109801250 109801290 41 ACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACG ACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTTAACG < 41bp 1 0.387017650699302 1 0.652595937252045 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801270 chr1:109801286 synonymous SNV . 0 37 hm5C_associated_SNPs_2991 0 0 2 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801286 109801286 1 + C T rs201291428 109801271 + 109801251 109801291 41 CAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACGT CAGCGGGACACCGACGCCCCCGGGGGCCACATCCTTAACGT < 41bp 1 0.686632804878714 1 0.862538933753967 experiment 0.626734390242572 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801271 chr1:109801286 synonymous SNV . 0 36 hm5C_associated_SNPs_2992 0 0 2 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801337 109801337 1 + C T rs556593359 109801320 + 109801300 109801340 41 CGGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTC CGGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCTTTC < 41bp 1 0.478315574018417 1 0.846319198608398 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801320 chr1:109801337 synonymous SNV . 0 38 hm5C_associated_SNPs_2993 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr1 109801337 109801337 1 + C T rs556593359 109801321 + 109801301 109801341 41 GGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCC GGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCTTTCC < 41bp 1 0.594618776240393 1 0.911846518516541 experiment 0.810762447519214 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801321 chr1:109801337 synonymous SNV . 0 37 hm5C_associated_SNPs_2994 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr1 109801337 109801337 1 + C T rs556593359 109801322 + 109801302 109801342 41 GTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCT GTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCTTTCCT < 41bp 1 0.761417890614056 1 0.949212670326233 experiment 0.477164218771888 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801322 chr1:109801337 synonymous SNV . 0 36 hm5C_associated_SNPs_2995 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr1 109801337 109801337 1 + C T rs556593359 109801328 + 109801308 109801348 41 CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCCCTC CAGCCGCCAGGGCCCGGGGGCGGGCCGCCTTTCCTGCCCTC < 41bp 1 0.294493778988285 1 0.860920071601868 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801328 chr1:109801337 synonymous SNV . 0 30 hm5C_associated_SNPs_2996 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr1 109801345 109801345 1 + C T rs75237799 109801328 + 109801308 109801348 41 CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCCCTC CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCTCTC < 41bp 1 0.298873247417762 1 0.80243718624115 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801328 chr1:109801345 nonsynonymous SNV 0.015 1 38 hm5C_associated_SNPs_2997 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr1 109811554 109811554 1 + C T rs368143806 109811544 + 109811524 109811564 41 CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGG CAAAGGGAACTTTGCTGGGGCCAAGCTGCCTCGCTACGAGG < 41bp 1 0.0389080059575621 1 0.0776008367538452 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811544 chr1:109811554 synonymous SNV . 0 31 hm5C_associated_SNPs_3000 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811554 109811554 1 + C T rs368143806 109811552 + 109811532 109811572 41 ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGT ACTTTGCTGGGGCCAAGCTGCCTCGCTACGAGGCCCTGCGT < 41bp 1 0.084260873151751 1 0.075434535741806 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811552 chr1:109811554 synonymous SNV . 0 23 hm5C_associated_SNPs_3001 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811554 109811554 1 + C T rs368143806 109811553 + 109811533 109811573 41 CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTG CTTTGCTGGGGCCAAGCTGCCTCGCTACGAGGCCCTGCGTG < 41bp 1 0.479189482700713 1 0.385519325733185 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811553 chr1:109811554 synonymous SNV . 0 22 hm5C_associated_SNPs_3002 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811554 109811554 1 + C T rs368143806 109811555 + 109811535 109811575 41 TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGGG TTGCTGGGGCCAAGCTGCCTCGCTACGAGGCCCTGCGTGGG < 41bp 1 0.394925075508853 1 0.79572606086731 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811555 chr1:109811554 synonymous SNV . 0 20 hm5C_associated_SNPs_3003 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811571 109811571 1 + G A rs79850681 109811552 + 109811532 109811572 41 ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGT ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCAT < 41bp 1 0.227079380529454 1 0.102236896753311 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811552 chr1:109811571 nonsynonymous SNV 0.849 0 40 hm5C_associated_SNPs_3004 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811571 109811571 1 + G A rs79850681 109811553 + 109811533 109811573 41 CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTG CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCATG < 41bp 1 0.230377629404351 1 0.229484468698502 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811553 chr1:109811571 nonsynonymous SNV 0.849 0 39 hm5C_associated_SNPs_3005 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811571 109811571 1 + G A rs79850681 109811554 + 109811534 109811574 41 TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGG TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCATGG < 41bp 1 0.139049412355478 1 0.181981414556503 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811554 chr1:109811571 nonsynonymous SNV 0.849 0 38 hm5C_associated_SNPs_3006 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811571 109811571 1 + G A rs79850681 109811555 + 109811535 109811575 41 TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGGG TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCATGGG < 41bp 1 0.294107585785711 1 0.416620969772339 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811555 chr1:109811571 nonsynonymous SNV 0.849 0 37 hm5C_associated_SNPs_3007 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 110134777 110134777 1 + G A rs61758987 110134762 + 110134742 110134782 41 GAGATCTATACTCACTTCACCTGTGCCACAGACACGAAGAA GAGATCTATACTCACTTCACCTGTGCCACAGACACAAAGAA < 41bp 1 0.180951079795972 1 0.391375571489334 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110134762 chr1:110134777 synonymous SNV . 0 36 hm5C_associated_SNPs_3009 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110134694-110134787
64251 chr1 110170102 110170102 1 + C T rs141396033 110170120 + 110170100 110170140 41 GACGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCAT GATGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCAT < 41bp 1 0.4803430247478 1 0.0302222073078156 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170120 chr1:110170102 synonymous SNV . 0 3 hm5C_associated_SNPs_3010 0 0 3 PPIG POSTAR2 ENCODE chr1:110170086-110170135
64251 chr1 110170103 110170103 1 + G A rs553822688 110170120 + 110170100 110170140 41 GACGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCAT GACATCAATGTGCTGATGGCCCTGATTATCAATGGCCCCAT < 41bp 1 0.426864022661766 1 0.0307740271091461 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170120 chr1:110170103 nonsynonymous SNV 0.999 2 4 hm5C_associated_SNPs_3011 0 0 3 PPIG POSTAR2 ENCODE chr1:110170086-110170135
64251 chr1 110210740 110210740 1 + G A rs201905887 110210743 + 110210723 110210763 41 ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTGGAA ACAGCAACCAGCACCATACCCATGACACTGGGGTACTGGAA < 41bp 1 0.722795380766819 1 0.166840106248856 experiment 0.554409238466361 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110210743 chr1:110210740 nonsynonymous SNV 0.035 2 18 hm5C_associated_SNPs_3013 0 0 2 DDX3X POSTAR2 ENCODE chr1:110210694-110210774
64251 chr1 110559005 110559005 1 + G A rs141465433 110558996 + 110558976 110559016 41 CTCTCCAAAGCTGGGAAGCTCTGTGTTCCGGCCATGAACGT CTCTCCAAAGCTGGGAAGCTCTGTGTTCCAGCCATGAACGT < 41bp 1 0.492094931007108 1 0.136383891105652 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110558996 chr1:110559005 synonymous SNV . 0 30 hm5C_associated_SNPs_3015 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110558982-110559021
64251 chr1 113241052 113241052 1 + T C rs2306940 113241053 + 113241033 113241073 41 CCTCCAAGAAGGGCAAAGCTCGCCTGAGCCCTCGAAGTGTG CCTCCAAGAAGGGCAAAGCCCGCCTGAGCCCTCGAAGTGTG < 41bp 1 0.618324076168415 1 0.195704400539398 experiment 0.76335184766317 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113241053 chr1:113241052 synonymous SNV . 0 20 hm5C_associated_SNPs_3026 0 0 3 GRWD1 POSTAR2 ENCODE chr1:113241006-113241073
64251 chr1 114516026 114516026 1 + C T rs114811221 114516043 + 114516023 114516063 41 GTACCAACACCAGTTTGCCACCCAATCCTACATTGGGTCTT GTATCAACACCAGTTTGCCACCCAATCCTACATTGGGTCTT < 41bp 1 0.329262992856548 1 0.107914090156555 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114516043 chr1:114516026 synonymous SNV . 0 4 hm5C_associated_SNPs_3027 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378376 chr1:114516020-114516040
64251 chr1 116916064 116916064 1 + A C rs546221648 116916081 + 116916061 116916101 41 GGGAGCTGCTCTGTGCTTTTCTCTCTGATTCTCCAGCGACA GGGCGCTGCTCTGTGCTTTTCTCTCTGATTCTCCAGCGACA < 41bp 1 0.292916264006076 1 0.184197992086411 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP1A1 ENSG00000269279 CDS Human other chr1:116916081 chr1:116916064 synonymous SNV . 0 4 hm5C_associated_SNPs_3030 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:116915900-116916120
64251 chr1 116942068 116942068 1 + G A rs145603535 116942086 + 116942066 116942106 41 GAGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCAGAAA GAACAGGCTGAGAGTGACATCATGAAGAGACAGCCCAGAAA < 41bp 1 0.656109645023465 1 0.313202261924744 experiment 0.687780709953069 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942086 chr1:116942068 synonymous SNV . 0 3 hm5C_associated_SNPs_3031 0 0 32 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:116942040-116942080
64251 chr1 117531911 117531911 1 + A G rs10923191 117531910 + 117531890 117531930 41 CCACCCACCTGCCCCATGTCCACTGGGCTGCCCAAGCTGCA CCACCCACCTGCCCCATGTCCGCTGGGCTGCCCAAGCTGCA < 41bp 1 0.625450566360377 1 0.182280689477921 experiment 0.749098867279246 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTGFRN ENSG00000134247 UTR3 Human protein_coding chr1:117531910 chr1:117531911 . . 0 22 hm5C_associated_SNPs_3032 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:117531900-117531921
64251 chr1 117602960 117602960 1 + C A rs2244501 117602962 + 117602942 117602982 41 TTTGTGGAACTTGGGGGACCCAGCGAAATGGAAGAAGTTAG TTTGTGGAACTTGGGGGAACCAGCGAAATGGAAGAAGTTAG < 41bp 1 0.685923452880355 1 0.736413061618805 experiment 0.628153094239289 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 UTR5 Human protein_coding chr1:117602962 chr1:117602960 . . 0 19 hm5C_associated_SNPs_3033 0 0 1 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr1:117602960-117602980
64251 chr1 117602965 117602965 1 + C A rs202173875 117602962 + 117602942 117602982 41 TTTGTGGAACTTGGGGGACCCAGCGAAATGGAAGAAGTTAG TTTGTGGAACTTGGGGGACCCAGAGAAATGGAAGAAGTTAG < 41bp 1 0.640434162969632 1 0.788447856903076 experiment 0.719131674060735 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 UTR5 Human protein_coding chr1:117602962 chr1:117602965 . . 0 24 hm5C_associated_SNPs_3034 0 0 1 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr1:117602960-117602980
64251 chr1 117617687 117617687 1 + C G rs35838803 117617669 + 117617649 117617689 41 AAAAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAG AAAAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATGAG < 41bp 1 0.514394864630994 1 0.448565036058426 experiment 0.971210270738012 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTF2 ENSG00000116830 CDS Human protein_coding chr1:117617669 chr1:117617687 nonsynonymous SNV 0.001 1 39 hm5C_associated_SNPs_3035 0 0 1 DDX24 POSTAR2 ENCODE chr1:117617680-117617703
64251 chr1 118170203 118170203 1 + C T rs377332001 118170194 + 118170174 118170214 41 GCTCATAGAGGCCATTCCTTCCTGGGTGTCGGACCAGGGCT GCTCATAGAGGCCATTCCTTCCTGGGTGTTGGACCAGGGCT < 41bp 1 0.728333620055836 1 0.602739930152893 experiment 0.543332759888328 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control FAM46C ENSG00000183508 UTR3 Human protein_coding chr1:118170194 chr1:118170203 . . 0 30 hm5C_associated_SNPs_3036 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:118170179-118170213
64251 chr1 118493462 118493462 1 + T C rs191049418 118493480 + 118493460 118493500 41 TTTCTGTCACTGTATGGACACAAACTGCCTGTTATATGCAT TTCCTGTCACTGTATGGACACAAACTGCCTGTTATATGCAT < 41bp 1 0.10461335260195 1 0.0867970287799835 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118493480 chr1:118493462 synonymous SNV . 0 3 hm5C_associated_SNPs_3037 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:118493457-118493505
64251 chr1 118499792 118499792 1 + T C rs199890965 118499775 + 118499755 118499795 41 AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTACATG < 41bp 1 0.175781005663131 1 0.0594446063041687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118499775 chr1:118499792 nonsynonymous SNV 0.025 1 38 hm5C_associated_SNPs_3038 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:118499763-118499796
64251 chr1 118502104 118502104 1 + T G rs75654390 118502122 + 118502102 118502142 41 CTTTTTCCTTTAAAGGACTCCTAAACTAAGCACAGAAGAGT CTGTTTCCTTTAAAGGACTCCTAAACTAAGCACAGAAGAGT < 41bp 1 0.258043886866584 1 0.337478369474411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR3 ENSG00000065183 UTR3 Human protein_coding chr1:118502122 chr1:118502104 . . 0 3 hm5C_associated_SNPs_3039 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:118502034-118502139
64251 chr1 120285546 120285546 1 + G A rs543703 120285545 + 120285525 120285565 41 GGGCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCA GGGCTTGGTCCAAGGCACTACACCTGTACTGCAGGGGCTCA < 41bp 1 0.505167968799273 1 0.155221790075302 experiment 0.989664062401455 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285545 chr1:120285546 synonymous SNV . 0 22 hm5C_associated_SNPs_3041 1 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:120285545-120285546
64251 chr1 120285546 120285546 1 + G A rs543703 120285547 + 120285527 120285567 41 GCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCAAT GCTTGGTCCAAGGCACTACACCTGTACTGCAGGGGCTCAAT < 41bp 1 0.272631308730176 1 0.0344723165035248 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285547 chr1:120285546 synonymous SNV . 0 20 hm5C_associated_SNPs_3042 1 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:120285545-120285546
64251 chr1 144014058 144014058 1 + G A rs587603097 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTGGAGAAGCTGGCAGAACGCTTCCTAGCCAAGACATGC < 41bp 1 0.176017306332367 1 0.254496604204178 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014058 . . 0 29 hm5C_associated_SNPs_3043 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:144014041-144014061
64251 chr1 144014058 144014058 1 + G A rs587603097 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTGGAGAAGCTGGCAGAACGCTTCCTAGCCAAGACATGCAG < 41bp 1 0.240507213629477 1 0.529560029506683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014058 . . 0 27 hm5C_associated_SNPs_3044 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:144014041-144014061
64251 chr1 144944716 144944716 1 + C G rs587659178 144944724 + 144944704 144944744 41 GTAGTATCTGTTCTTATCAGCTTAAATAATCAGGATGGAAA GTAGTATCTGTTGTTATCAGCTTAAATAATCAGGATGGAAA < 41bp 1 0.0418482567669269 1 0.123228073120117 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LOC100996724 ENSG00000222788 ncRNA_exonic Human snRNA chr1:144944724 chr1:144944716 . . 0 13 hm5C_associated_SNPs_3045 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:144944686-144944725
64251 chr1 145115800 145115800 1 + T C rs587606098 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACCTGAACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0542264323024266 1 0.0520366728305817 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115800 . . 0 12 hm5C_associated_SNPs_3048 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145115755-145115805
64251 chr1 145477339 145477339 1 + G A rs587627164 145477340 + 145477320 145477360 41 GCCGCTGCTCCTGTCTGGGGCCCCAGGACTACCCCTGCCCC GCCGCTGCTCCTGTCTGGGACCCCAGGACTACCCCTGCCCC < 41bp 1 0.368428711668966 1 0.366066575050354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LIX1L ENSG00000152022 CDS Human other chr1:145477340 chr1:145477339 nonsynonymous SNV . 0 20 hm5C_associated_SNPs_3054 0 0 1 GEMIN5 POSTAR2 ENCODE chr1:145477338-145477405
64251 chr1 145518136 145518136 1 + G A rs587764801 145518156 + 145518136 145518176 41 GTTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAATCG ATTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAATCG < 41bp 1 0.209843339196327 1 0.0676871538162231 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145518156 chr1:145518136 nonsynonymous SNV . 0 1 hm5C_associated_SNPs_3059 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:145518113-145518147
64251 chr1 145585833 145585833 1 + T G rs75595063 145585822 + 145585802 145585842 41 TTAACCTCTTTTTAAGGACACTGGGGTCTGTTTCTGGAAAT TTAACCTCTTTTTAAGGACACTGGGGTCTGTGTCTGGAAAT < 41bp 1 0.23507430764565 1 0.281362175941467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIAS3 ENSG00000131788 UTR3 Human protein_coding chr1:145585822 chr1:145585833 . . 0 32 hm5C_associated_SNPs_3061 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:145585798-145585838
64251 chr1 147719036 147719036 1 + T C rs587619612 147719045 + 147719025 147719065 41 ACCTGTCTCTGTGGCGCAATCGGTCAGAGCGTTCGGCTATT ACCTGTCTCTGCGGCGCAATCGGTCAGAGCGTTCGGCTATT < 41bp 1 0.400115392271395 1 0.7818683385849 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC101927468 ENSG00000227700 downstream Human processed_pseudogene chr1:147719045 chr1:147719036 . . 0 12 hm5C_associated_SNPs_3063 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:147719020-147719040
64251 chr1 147719046 147719046 1 + G C rs112795352 147719045 + 147719025 147719065 41 ACCTGTCTCTGTGGCGCAATCGGTCAGAGCGTTCGGCTATT ACCTGTCTCTGTGGCGCAATCCGTCAGAGCGTTCGGCTATT < 41bp 1 0.130649100334935 1 0.171921938657761 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC101927468 ENSG00000227700 downstream Human processed_pseudogene chr1:147719045 chr1:147719046 . . 0 22 hm5C_associated_SNPs_3064 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr1:147719020-147719060
64251 chr1 147719046 147719046 1 + G C rs112795352 147719058 + 147719038 147719078 41 GCGCAATCGGTCAGAGCGTTCGGCTATTAACCGAACGGTGA GCGCAATCCGTCAGAGCGTTCGGCTATTAACCGAACGGTGA < 41bp 1 0.499712647304644 1 0.261829763650894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC101927468 ENSG00000227700 downstream Human processed_pseudogene chr1:147719058 chr1:147719046 . . 0 9 hm5C_associated_SNPs_3065 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr1:147719020-147719060
64251 chr1 148248124 148248124 1 + G A rs587682440 148248127 + 148248107 148248147 41 CAGTACCTGTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGC CAGTACCTGTCTCTGTGACGCAATCGGTTAGCGCGTTCGGC < 41bp 1 0.103624361810238 1 0.223477065563202 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248127 chr1:148248124 . . 0 18 hm5C_associated_SNPs_3066 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr1:148248108-148248149
64251 chr1 148248124 148248124 1 + G A rs587682440 148248144 + 148248124 148248164 41 GCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTG ACGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTG < 41bp 1 0.592262603349427 1 0.0904222130775452 experiment 0.815474793301145 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248144 chr1:148248124 . . 0 1 hm5C_associated_SNPs_3067 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr1:148248108-148248149
64251 chr1 148248125 148248125 1 + C A rs587764409 148248127 + 148248107 148248147 41 CAGTACCTGTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGC CAGTACCTGTCTCTGTGGAGCAATCGGTTAGCGCGTTCGGC < 41bp 1 0.0845287547944375 1 0.260852456092834 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248127 chr1:148248125 . . 0 19 hm5C_associated_SNPs_3068 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr1:148248108-148248149
64251 chr1 148248125 148248125 1 + C A rs587764409 148248144 + 148248124 148248164 41 GCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTG GAGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTG < 41bp 1 0.560217583399328 1 0.0761602222919464 experiment 0.879564833201344 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248144 chr1:148248125 . . 0 2 hm5C_associated_SNPs_3069 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr1:148248108-148248149
64251 chr1 148248155 148248155 1 + C T rs587765549 148248144 + 148248124 148248164 41 GCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTG GCGCAATCGGTTAGCGCGTTCGGCTGTTAACTGAAAGGTTG < 41bp 1 0.642857188402544 1 0.0868683755397797 experiment 0.714285623194912 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248144 chr1:148248155 . . 0 32 hm5C_associated_SNPs_3070 0 0 71 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:148248120-148248180
64251 chr1 148248155 148248155 1 + C T rs587765549 148248171 + 148248151 148248191 41 TAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCT TAACTGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCT < 41bp 1 0.401405624931701 1 0.469014465808868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248171 chr1:148248155 . . 0 5 hm5C_associated_SNPs_3071 0 0 71 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:148248120-148248180
64251 chr1 148248155 148248155 1 + C T rs587765549 148248175 + 148248155 148248195 41 CGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCTCTTT TGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCTCTTT < 41bp 1 0.0916333708611689 1 0.0329773724079132 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248175 chr1:148248155 . . 0 1 hm5C_associated_SNPs_3072 0 0 71 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:148248120-148248180
64251 chr1 148248187 148248187 1 + C A rs587657101 148248171 + 148248151 148248191 41 TAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCT TAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGAAGCCT < 41bp 1 0.399935163080895 1 0.417023748159409 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248171 chr1:148248187 . . 0 37 hm5C_associated_SNPs_3073 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:148248146-148248189
64251 chr1 148248187 148248187 1 + C A rs587657101 148248175 + 148248155 148248195 41 CGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCTCTTT CGAAAGGTTGGTGGTTCGAGCCCACCCAGGGAAGCCTCTTT < 41bp 1 0.0873270733808299 1 0.0336086750030518 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248175 chr1:148248187 . . 0 33 hm5C_associated_SNPs_3074 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:148248146-148248189
64251 chr1 148248187 148248187 1 + C A rs587657101 148248177 + 148248157 148248197 41 AAAGGTTGGTGGTTCGAGCCCACCCAGGGACGCCTCTTTGA AAAGGTTGGTGGTTCGAGCCCACCCAGGGAAGCCTCTTTGA < 41bp 1 0.366365070290238 1 0.100580424070358 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248177 chr1:148248187 . . 0 31 hm5C_associated_SNPs_3075 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:148248146-148248189
64251 chr1 148248187 148248187 1 + C A rs587657101 148248180 + 148248160 148248200 41 GGTTGGTGGTTCGAGCCCACCCAGGGACGCCTCTTTGAGCT GGTTGGTGGTTCGAGCCCACCCAGGGAAGCCTCTTTGAGCT < 41bp 1 0.650166201533408 1 0.596657633781433 experiment 0.699667596933183 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBPF19;NBPF26 ENSG00000236140 upstream Human lincRNA chr1:148248180 chr1:148248187 . . 0 28 hm5C_associated_SNPs_3076 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:148248146-148248189
64251 chr1 150280546 150280546 1 + C T rs10480 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAGCCATGCTGCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.774242479748423 1 0.777082085609436 experiment 0.451515040503154 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280546 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_3077 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150280491-150280593
64251 chr1 150280550 150280550 1 + G A rs4845 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAGCCATGCCGCCAGCGACAGAGGGAAAGCTAT < 41bp 1 0.650533149233575 1 0.658293843269348 experiment 0.698933701532851 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280550 nonsynonymous SNV 0.557 0 22 hm5C_associated_SNPs_3078 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150280491-150280593
64251 chr1 150470990 150470990 1 + C T rs41264465 150470979 + 150470959 150470999 41 CTCTGCACCCCAACCTCAGCCTGATGTTCGCCCACCGGCCC CTCTGCACCCCAACCTCAGCCTGATGTTCGCTCACCGGCCC < 41bp 1 0.64616877281113 1 0.423715382814407 experiment 0.70766245437774 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TARS2 ENSG00000143374 CDS Human protein_coding chr1:150470979 chr1:150470990 synonymous SNV . 0 32 hm5C_associated_SNPs_3079 1 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:150470988-150471011
64251 chr1 150923099 150923099 1 + T C rs17661357 150923116 + 150923096 150923136 41 CTGTCTGTCTCGAGTCAGACCTATGAGGAATGAGCAGTACC CTGCCTGTCTCGAGTCAGACCTATGAGGAATGAGCAGTACC < 41bp 1 0.209454905718021 1 0.284833133220673 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923116 chr1:150923099 synonymous SNV . 0 4 hm5C_associated_SNPs_3080 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:150923093-150923115
64251 chr1 151020378 151020378 1 + C T rs74856367 151020375 + 151020355 151020395 41 TCCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAA TCCTGCTGCTGAATCTGGGTCCCTGGGCGGCGGGGGCCCAA < 41bp 1 0.401877936549696 1 0.140821397304535 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020375 chr1:151020378 nonsynonymous SNV 0.667 1 24 hm5C_associated_SNPs_3081 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020378 151020378 1 + C T rs74856367 151020376 + 151020356 151020396 41 CCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAG CCTGCTGCTGAATCTGGGTCCCTGGGCGGCGGGGGCCCAAG < 41bp 1 0.542804102686165 1 0.38517165184021 experiment 0.914391794627671 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020376 chr1:151020378 nonsynonymous SNV 0.667 1 23 hm5C_associated_SNPs_3082 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020378 151020378 1 + C T rs74856367 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCCCTGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC < 41bp 1 0.697484550079515 1 0.629277110099792 experiment 0.605030899840969 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020378 nonsynonymous SNV 0.667 1 8 hm5C_associated_SNPs_3083 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020378 151020378 1 + C T rs74856367 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCCCTGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC < 41bp 1 0.502141686017928 1 0.777862906455994 experiment 0.995716627964145 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020378 nonsynonymous SNV 0.667 1 7 hm5C_associated_SNPs_3084 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020398 151020398 1 + C T rs115769286 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCCCCGGGCGGCGGGGGCCCAAGGTCTGACCCAGACTC < 41bp 1 0.649908090376645 1 0.500081717967987 experiment 0.70018381924671 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020398 synonymous SNV . 0 28 hm5C_associated_SNPs_3085 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020398 151020398 1 + C T rs115769286 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCCCCGGGCGGCGGGGGCCCAAGGTCTGACCCAGACTCC < 41bp 1 0.602768441536506 1 0.755930423736572 experiment 0.794463116926989 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020398 synonymous SNV . 0 27 hm5C_associated_SNPs_3086 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020401 151020401 1 + G A rs116195801 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTAACCCAGACTC < 41bp 1 0.694668585597597 1 0.474880546331406 experiment 0.610662828804807 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020401 synonymous SNV . 0 31 hm5C_associated_SNPs_3087 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020401 151020401 1 + G A rs116195801 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCCCCGGGCGGCGGGGGCCCAAGGCCTAACCCAGACTCC < 41bp 1 0.524274778520899 1 0.721778333187103 experiment 0.951450442958201 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020401 synonymous SNV . 0 30 hm5C_associated_SNPs_3088 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151633309 151633309 1 + A G rs146222009 151633305 + 151633285 151633325 41 CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC CGAGTAATTGGTGAGAGTGACATCGTGCAGGAATTCCTATC < 41bp 1 0.210035530562388 1 0.284423172473907 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX27 ENSG00000143376 CDS Human protein_coding chr1:151633305 chr1:151633309 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_3090 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151633275-151633311
64251 chr1 151670090 151670090 1 + G A rs117826940 151670098 + 151670078 151670118 41 TTGGGTGATGGAGGCGGGTTCCCTGTGGCTGCGTGGATCCC TTGGGTGATGGAAGCGGGTTCCCTGTGGCTGCGTGGATCCC < 41bp 1 0.243933894750703 1 0.0521741509437561 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX27 ENSG00000143376 UTR3 Human protein_coding chr1:151670098 chr1:151670090 . . 0 13 hm5C_associated_SNPs_3091 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:151670078-151670096
64251 chr1 153617525 153617525 1 + T C rs184115092 153617536 + 153617516 153617556 41 TTTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGT TTTTTTTTTCCCCCTTTGGGCCAGGTCGGGGTATGATAGGT < 41bp 1 0.131186981796935 1 0.369094729423523 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTOP ENSG00000160679 intronic Human protein_coding chr1:153617536 chr1:153617525 . . 0 10 hm5C_associated_SNPs_3094 0 0 17 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:153617462-153617537
64251 chr1 153617525 153617525 1 + T C rs184115092 153617537 + 153617517 153617557 41 TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC TTTTTTTTCCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC < 41bp 1 0.164999436259114 1 0.433088481426239 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CHTOP ENSG00000160679 intronic Human protein_coding chr1:153617537 chr1:153617525 . . 0 9 hm5C_associated_SNPs_3095 0 0 17 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:153617462-153617537
64251 chr1 153617544 153617544 1 + G A rs145696354 153617536 + 153617516 153617556 41 TTTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGT TTTTTTTTTTCCCCTTTGGGCCAGGTCGAGGTATGATAGGT < 41bp 1 0.121420298086718 1 0.401510775089264 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617536 chr1:153617544 synonymous SNV 1.000 0 29 hm5C_associated_SNPs_3096 0 0 29 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr1 153617544 153617544 1 + G A rs145696354 153617537 + 153617517 153617557 41 TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC TTTTTTTTTCCCCTTTGGGCCAGGTCGAGGTATGATAGGTC < 41bp 1 0.152472024080784 1 0.462268024682999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617537 chr1:153617544 synonymous SNV 1.000 0 28 hm5C_associated_SNPs_3097 0 0 29 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr1 153643775 153643775 1 + T C rs541478219 153643756 + 153643736 153643776 41 CGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATG CGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGACG < 41bp 1 0.0912655892738627 1 0.0175411701202393 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643756 chr1:153643775 . . 0 40 hm5C_associated_SNPs_3098 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643757 + 153643737 153643777 41 GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGG GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGACGG < 41bp 1 0.203254000864589 1 0.0207042098045349 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643757 chr1:153643775 . . 0 39 hm5C_associated_SNPs_3099 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643758 + 153643738 153643778 41 CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGA CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGACGGA < 41bp 1 0.370718889109944 1 0.055264800786972 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643758 chr1:153643775 . . 0 38 hm5C_associated_SNPs_3100 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643763 + 153643743 153643783 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGACGGATCGAA < 41bp 1 0.33572125609288 1 0.309136688709259 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643763 chr1:153643775 . . 0 33 hm5C_associated_SNPs_3101 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643764 + 153643744 153643784 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGACGGATCGAAA < 41bp 1 0.685700619100094 1 0.841948509216309 experiment 0.628598761799812 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643764 chr1:153643775 . . 0 32 hm5C_associated_SNPs_3102 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643772 + 153643752 153643792 41 TGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTC TGGGCCCATAACCCAGAGGTCGACGGATCGAAACCATCCTC < 41bp 1 0.644367363903704 1 0.364901840686798 experiment 0.711265272192593 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643772 chr1:153643775 . . 0 24 hm5C_associated_SNPs_3103 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643780 + 153643760 153643800 41 TAACCCAGAGGTCGATGGATCGAAACCATCCTCTGCTATCG TAACCCAGAGGTCGACGGATCGAAACCATCCTCTGCTATCG < 41bp 1 0.648861343779451 1 0.432787835597992 experiment 0.702277312441098 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643780 chr1:153643775 . . 0 16 hm5C_associated_SNPs_3104 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643785 + 153643765 153643805 41 CAGAGGTCGATGGATCGAAACCATCCTCTGCTATCGGAGTT CAGAGGTCGACGGATCGAAACCATCCTCTGCTATCGGAGTT < 41bp 1 0.043775799059126 1 0.0858750641345978 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643785 chr1:153643775 . . 0 11 hm5C_associated_SNPs_3105 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643786 + 153643766 153643806 41 AGAGGTCGATGGATCGAAACCATCCTCTGCTATCGGAGTTT AGAGGTCGACGGATCGAAACCATCCTCTGCTATCGGAGTTT < 41bp 1 0.137796182676041 1 0.0978776216506958 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643786 chr1:153643775 . . 0 10 hm5C_associated_SNPs_3106 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643789 + 153643769 153643809 41 GGTCGATGGATCGAAACCATCCTCTGCTATCGGAGTTTTTT GGTCGACGGATCGAAACCATCCTCTGCTATCGGAGTTTTTT < 41bp 1 0.0584891178170637 1 0.0216858983039856 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643789 chr1:153643775 . . 0 7 hm5C_associated_SNPs_3107 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643790 + 153643770 153643810 41 GTCGATGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTC GTCGACGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTC < 41bp 1 0.276421405058735 1 0.0295112133026123 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643790 chr1:153643775 . . 0 6 hm5C_associated_SNPs_3108 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643792 + 153643772 153643812 41 CGATGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTCAT CGACGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTCAT < 41bp 1 0.49035794736507 1 0.488946050405502 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643792 chr1:153643775 . . 0 4 hm5C_associated_SNPs_3109 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 153643775 153643775 1 + T C rs541478219 153643795 + 153643775 153643815 41 TGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTCATTGC CGGATCGAAACCATCCTCTGCTATCGGAGTTTTTTCATTGC < 41bp 1 0.047342733603972 1 0.153307348489761 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ILF2 ENSG00000143621 upstream Human protein_coding chr1:153643795 chr1:153643775 . . 0 1 hm5C_associated_SNPs_3110 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153643769-153643799
64251 chr1 154232212 154232212 1 + C T rs530748291 154232218 + 154232198 154232238 41 CAAGTGGGCATACCCGTAGACCTTGTCTGACTGTGCTCATG CAAGTGGGCATACCTGTAGACCTTGTCTGACTGTGCTCATG < 41bp 1 0.0292997205272911 1 0.00988137722015381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232218 chr1:154232212 . . 0 15 hm5C_associated_SNPs_3129 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232212 154232212 1 + C T rs530748291 154232228 + 154232208 154232248 41 TACCCGTAGACCTTGTCTGACTGTGCTCATGGCCAGGCAGG TACCTGTAGACCTTGTCTGACTGTGCTCATGGCCAGGCAGG < 41bp 1 0.142650799976677 1 0.0848335325717926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232228 chr1:154232212 . . 0 5 hm5C_associated_SNPs_3130 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232256 154232256 1 + G C rs374645971 154232240 + 154232220 154232260 41 TTGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTA TTGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACACTGTA < 41bp 1 0.16994849647895 1 0.220600724220276 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232240 chr1:154232256 . . 0 37 hm5C_associated_SNPs_3131 0 0 14 FBL POSTAR2 GSE43666,GSM1067864 chr1:154232232-154232270
64251 chr1 154232256 154232256 1 + G C rs374645971 154232241 + 154232221 154232261 41 TGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTAT TGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACACTGTAT < 41bp 1 0.324306102488242 1 0.776765465736389 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232241 chr1:154232256 . . 0 36 hm5C_associated_SNPs_3132 0 0 14 FBL POSTAR2 GSE43666,GSM1067864 chr1:154232232-154232270
64251 chr1 154232256 154232256 1 + G C rs374645971 154232245 + 154232225 154232265 41 TGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTATGCAA TGACTGTGCTCATGGCCAGGCAGGGGGGACACTGTATGCAA < 41bp 1 0.635943922570914 1 0.841189622879028 experiment 0.728112154858172 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232245 chr1:154232256 . . 0 32 hm5C_associated_SNPs_3133 0 0 14 FBL POSTAR2 GSE43666,GSM1067864 chr1:154232232-154232270
64251 chr1 154303934 154303934 1 + C T rs139970814 154303952 + 154303932 154303972 41 AGCGATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT AGTGATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT < 41bp 1 0.185155347454673 1 0.0452964305877686 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154303952 chr1:154303934 synonymous SNV . 0 3 hm5C_associated_SNPs_3134 0 0 1 SF3B4 POSTAR2 ENCODE chr1:154303923-154303948
64251 chr1 154317153 154317153 1 + C T rs1194587 154317162 + 154317142 154317182 41 TCATCCCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA TCATCCCGCTCTGTAGGCAACGGCTTCACCTATCAGGACAA < 41bp 1 0.307349756505163 1 0.343982636928558 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317162 chr1:154317153 synonymous SNV . 0 12 hm5C_associated_SNPs_3135 0 0 1 DDX24 POSTAR2 ENCODE chr1:154317132-154317172
64251 chr1 154947213 154947213 1 + C T rs138322198 154947230 + 154947210 154947250 41 AACCGAGCGATCATGTCGCACAAACAAATTTACTATTCGGA AACTGAGCGATCATGTCGCACAAACAAATTTACTATTCGGA < 41bp 1 0.0837209330014537 1 0.122836500406265 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS1B ENSG00000173207 UTR5 Human protein_coding chr1:154947230 chr1:154947213 . . 0 4 hm5C_associated_SNPs_3136 0 0 7 DDX3X POSTAR2 ENCODE chr1:154947154-154947274
64251 chr1 154951586 154951586 1 + T C rs185916119 154951573 + 154951553 154951593 41 ACCATGGCTGTTACAGGGATCATGTAAACTTGCTGTTTTTG ACCATGGCTGTTACAGGGATCATGTAAACTTGCCGTTTTTG < 41bp 1 0.232107360666752 1 0.552234292030334 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951573 chr1:154951586 . . 0 34 hm5C_associated_SNPs_3137 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr1:154951570-154951664
64251 chr1 154951586 154951586 1 + T C rs185916119 154951601 + 154951581 154951621 41 CTTGCTGTTTTTGTTTTTTCCTGCCGGGTGTTGTATGTGTG CTTGCCGTTTTTGTTTTTTCCTGCCGGGTGTTGTATGTGTG < 41bp 1 0.352162268050627 1 0.147113770246506 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951601 chr1:154951586 . . 0 6 hm5C_associated_SNPs_3138 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr1:154951570-154951664
64251 chr1 154988870 154988870 1 + C T rs146374595 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AGGCTTTCGCCAAGGAGGATCACCTGCAGCGCCACCTCAAA < 41bp 1 0.293710294656174 1 0.265378952026367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988870 synonymous SNV . 0 20 hm5C_associated_SNPs_3149 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:154988854-154988891
64251 chr1 155023796 155023796 1 + C T rs193116209 155023808 + 155023788 155023828 41 CGACCTGGCCGCCGGCCGCTCCTCCGCGCGCTGTTCCGCAC CGACCTGGTCGCCGGCCGCTCCTCCGCGCGCTGTTCCGCAC < 41bp 1 0.181897721749699 1 0.191681981086731 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCST1-AS1 ENSG00000143537 UTR5 Human protein_coding chr1:155023808 chr1:155023796 . . 0 9 hm5C_associated_SNPs_3150 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:155023780-155023800
64251 chr1 155032752 155032752 1 + A G rs61751624 155032751 + 155032731 155032771 41 GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG GTCCTGGTGATGCTTGGTGCCGGCTACTGGTACCGTGCCCG < 41bp 1 0.6231488131092 1 0.820893049240112 experiment 0.7537023737816 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032751 chr1:155032752 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_3151 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155032744-155032779
64251 chr1 155032771 155032771 1 + G A rs147260444 155032751 + 155032731 155032771 41 GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCA < 41bp 1 0.560183814694781 1 0.556206524372101 experiment 0.879632370610438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032751 chr1:155032771 nonsynonymous SNV 0.486 2 41 hm5C_associated_SNPs_3152 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155032744-155032779
64251 chr1 155033918 155033918 1 + C T rs41264285 155033936 + 155033916 155033956 41 CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG CCTCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG < 41bp 1 0.23739428246856 1 0.370964527130127 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155033936 chr1:155033918 nonsynonymous SNV 0.641 0 3 hm5C_associated_SNPs_3153 0 0 5 PCBP2 POSTAR2 ENCODE chr1:155033787-155033918
64251 chr1 155033921 155033921 1 + C A rs199706846 155033936 + 155033916 155033956 41 CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG CCCCCACTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG < 41bp 1 0.241873619907485 1 0.305950582027435 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155033936 chr1:155033921 nonsynonymous SNV 0.844 3 6 hm5C_associated_SNPs_3154 0 0 4 PRPF8 POSTAR2 ENCODE chr1:155033905-155034009
64251 chr1 155033938 155033938 1 + G A rs199883535 155033936 + 155033916 155033956 41 CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG CCCCCCCTTCCAGGCCGCTGCCACCTGACCCTGTGTCCAAG < 41bp 1 0.142248822078377 1 0.145904302597046 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155033936 chr1:155033938 nonsynonymous SNV 0.895 0 23 hm5C_associated_SNPs_3155 0 0 5 PRPF8 POSTAR2 ENCODE chr1:155033905-155034009
64251 chr1 155106016 155106016 1 + G A rs6699434 155106004 + 155105984 155106024 41 CCCATCCACCAGCATGAAGACCGCTGCTTGAGGTTGAAGGT CCCATCCACCAGCATGAAGACCGCTGCTTGAGATTGAAGGT < 41bp 1 0.178426316883396 1 0.154070109128952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106004 chr1:155106016 synonymous SNV . 0 33 hm5C_associated_SNPs_3156 0 0 4 BUD13 POSTAR2 ENCODE chr1:155105924-155106018
64251 chr1 155852123 155852123 1 + C T rs729022 155852142 + 155852122 155852162 41 CCATCTTTTCTTTTTATTGCCTCTTATATCTCTGCTCTTTG CTATCTTTTCTTTTTATTGCCTCTTATATCTCTGCTCTTTG < 41bp 1 0.0757343898898675 1 0.0207990407943726 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYT11 ENSG00000132718 UTR3 Human protein_coding chr1:155852142 chr1:155852123 . . 0 2 hm5C_associated_SNPs_3161 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:155852107-155852156
64251 chr1 155854588 155854588 1 + A G rs188404705 155854589 + 155854569 155854609 41 CAGTTCATCTCACTGGAGCACAGCCAAGATGGACATGTTTA CAGTTCATCTCACTGGAGCGCAGCCAAGATGGACATGTTTA < 41bp 1 0.44958218745762 1 0.206717789173126 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYT11 ENSG00000132718 UTR3 Human protein_coding chr1:155854589 chr1:155854588 . . 0 20 hm5C_associated_SNPs_3162 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr1:155854555-155854591
64251 chr1 156705634 156705634 1 + T C rs149632417 156705645 + 156705625 156705665 41 CAGCCTGGCTCTACTGCTTGCCCCACTGGTGGAGACGCTTA CAGCCTGGCCCTACTGCTTGCCCCACTGGTGGAGACGCTTA < 41bp 1 0.468882410677996 1 0.289534747600555 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156705645 chr1:156705634 nonsynonymous SNV 0.893 0 10 hm5C_associated_SNPs_3169 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156705609-156705645
64251 chr1 156737321 156737321 1 + C G rs552053404 156737326 + 156737306 156737346 41 GAGGAGGCGGAGTGACTCGGCGGCCATTAGCTGTGTGTAGT GAGGAGGCGGAGTGAGTCGGCGGCCATTAGCTGTGTGTAGT < 41bp 1 0.386651470995607 1 0.621960341930389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRCC ENSG00000143294 UTR5 Human protein_coding chr1:156737326 chr1:156737321 . . 0 16 hm5C_associated_SNPs_3170 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585666 chr1:156737315-156737335
64251 chr1 156756603 156756603 1 + G A rs144879598 156756587 + 156756567 156756607 41 TCTTGCCCCTGTTGTGGGCACCACAACCACCACTCCGTCGC TCTTGCCCCTGTTGTGGGCACCACAACCACCACTCCATCGC < 41bp 1 0.462984564146133 1 0.0836064517498016 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756587 chr1:156756603 synonymous SNV . 0 37 hm5C_associated_SNPs_3171 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756603 156756603 1 + G A rs144879598 156756593 + 156756573 156756613 41 CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG CCCTGTTGTGGGCACCACAACCACCACTCCATCGCCCTCTG < 41bp 1 0.201727640647388 1 0.0988052487373352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756593 chr1:156756603 synonymous SNV . 0 31 hm5C_associated_SNPs_3172 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756603 156756603 1 + G A rs144879598 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA TGTTGTGGGCACCACAACCACCACTCCATCGCCCTCTGCTA < 41bp 1 0.211601622667679 1 0.257475197315216 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756603 synonymous SNV . 0 28 hm5C_associated_SNPs_3173 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156761543 156761543 1 + C A rs35929266 156761563 + 156761543 156761583 41 CAGGAAATTGCCCCAGATGCCTCCTTCATCGATGACGAAGC AAGGAAATTGCCCCAGATGCCTCCTTCATCGATGACGAAGC < 41bp 1 0.513725059176556 1 0.478168904781342 experiment 0.972549881646888 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156761563 chr1:156761543 nonsynonymous SNV 0.986 1 1 hm5C_associated_SNPs_3174 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:156761519-156761543
64251 chr1 160323977 160323977 1 + A C rs143039637 160323975 + 160323955 160323995 41 TGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC TGCTGTCATCCTCAGGAGGCCACATCAGTCCCAGCCTCTCC < 41bp 1 0.328259409414053 1 0.110940903425217 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323975 chr1:160323977 nonsynonymous SNV 0.052 1 23 hm5C_associated_SNPs_3178 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:160323959-160323988
64251 chr1 161088000 161088000 1 + G A rs76502631 161088011 + 161087991 161088031 41 TCGGCCGCGGTGAATCCCACCTGCGGTGCTTTAACTTGTGT TCGGCCGCGATGAATCCCACCTGCGGTGCTTTAACTTGTGT < 41bp 1 0.288399316149599 1 0.269098818302155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIT1 ENSG00000158793 UTR5 Human protein_coding chr1:161088011 chr1:161088000 . . 0 10 hm5C_associated_SNPs_3179 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:161087978-161088001
64251 chr1 161137807 161137807 1 + C A rs532136485 161137819 + 161137799 161137839 41 CTTCACCCCCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTG CTTCACCCACCTTCTCCAAACCTCTGTTTTGGGCTGGGCTG < 41bp 1 0.0664032202148575 1 0.0614587068557739 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161137819 chr1:161137807 nonsynonymous SNV 0.964 5 9 hm5C_associated_SNPs_3180 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:161137796-161137822
64251 chr1 161137807 161137807 1 + C A rs532136485 161137822 + 161137802 161137842 41 CACCCCCCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAGG CACCCACCTTCTCCAAACCTCTGTTTTGGGCTGGGCTGAGG < 41bp 1 0.20289270786887 1 0.087911456823349 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161137822 chr1:161137807 nonsynonymous SNV 0.964 5 6 hm5C_associated_SNPs_3181 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:161137796-161137822
64251 chr1 161500937 161500937 1 + C T rs184807445 161500925 + 161500905 161500945 41 GTTGGTGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGT GTTGGTGGTATAGTGGTGAGCATAGCTGCCTTTCAAGCAGT < 41bp 1 0.297341667410347 1 0.147422164678574 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500925 chr1:161500937 . . 0 33 hm5C_associated_SNPs_3182 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500930 + 161500910 161500950 41 TGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACC TGGTATAGTGGTGAGCATAGCTGCCTTTCAAGCAGTTGACC < 41bp 1 0.418532685421722 1 0.370184600353241 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500930 chr1:161500937 . . 0 28 hm5C_associated_SNPs_3183 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500933 + 161500913 161500953 41 TATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGG TATAGTGGTGAGCATAGCTGCCTTTCAAGCAGTTGACCCGG < 41bp 1 0.0332686082945387 1 0.123465120792389 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500933 chr1:161500937 . . 0 25 hm5C_associated_SNPs_3184 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500934 + 161500914 161500954 41 ATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGG ATAGTGGTGAGCATAGCTGCCTTTCAAGCAGTTGACCCGGG < 41bp 1 0.0595205565303004 1 0.0662382245063782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500934 chr1:161500937 . . 0 24 hm5C_associated_SNPs_3185 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500938 + 161500918 161500958 41 TGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCG TGGTGAGCATAGCTGCCTTTCAAGCAGTTGACCCGGGTTCG < 41bp 1 0.542876838160584 1 0.464152961969376 experiment 0.914246323678832 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500938 chr1:161500937 . . 0 20 hm5C_associated_SNPs_3186 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500942 + 161500922 161500962 41 GAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC GAGCATAGCTGCCTTTCAAGCAGTTGACCCGGGTTCGATTC < 41bp 1 0.534659146221871 1 0.422440052032471 experiment 0.930681707556257 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500942 chr1:161500937 . . 0 16 hm5C_associated_SNPs_3187 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500950 + 161500930 161500970 41 CTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAA CTGCCTTTCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAA < 41bp 1 0.679851830501122 1 0.758940935134888 experiment 0.640296338997757 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500950 chr1:161500937 . . 0 8 hm5C_associated_SNPs_3188 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500951 + 161500931 161500971 41 TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC TGCCTTTCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC < 41bp 1 0.547852788167959 1 0.564927041530609 experiment 0.904294423664082 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500951 chr1:161500937 . . 0 7 hm5C_associated_SNPs_3189 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500937 161500937 1 + C T rs184807445 161500957 + 161500937 161500977 41 CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGG TCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGG < 41bp 1 0.191575871992411 1 0.120516985654831 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500957 chr1:161500937 . . 0 1 hm5C_associated_SNPs_3190 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:161500880-161500940
64251 chr1 161500947 161500947 1 + G A rs189663649 161500930 + 161500910 161500950 41 TGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACC TGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTAACC < 41bp 1 0.436100687239273 1 0.259073436260223 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500930 chr1:161500947 . . 0 38 hm5C_associated_SNPs_3191 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500933 + 161500913 161500953 41 TATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGG TATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTAACCCGG < 41bp 1 0.0215302141502436 1 0.275272011756897 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500933 chr1:161500947 . . 0 35 hm5C_associated_SNPs_3192 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500934 + 161500914 161500954 41 ATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGG ATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTAACCCGGG < 41bp 1 0.11747257792568 1 0.13035324215889 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500934 chr1:161500947 . . 0 34 hm5C_associated_SNPs_3193 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500937 + 161500917 161500957 41 GTGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTC GTGGTGAGCATAGCTGCCTTCCAAGCAGTTAACCCGGGTTC < 41bp 1 0.328853726546028 1 0.709209322929382 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500937 chr1:161500947 . . 0 31 hm5C_associated_SNPs_3194 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500938 + 161500918 161500958 41 TGGTGAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCG TGGTGAGCATAGCTGCCTTCCAAGCAGTTAACCCGGGTTCG < 41bp 1 0.472138875602176 1 0.375661075115204 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500938 chr1:161500947 . . 0 30 hm5C_associated_SNPs_3195 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500942 + 161500922 161500962 41 GAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC GAGCATAGCTGCCTTCCAAGCAGTTAACCCGGGTTCGATTC < 41bp 1 0.424681910482223 1 0.749776601791382 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500942 chr1:161500947 . . 0 26 hm5C_associated_SNPs_3196 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500950 + 161500930 161500970 41 CTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAA CTGCCTTCCAAGCAGTTAACCCGGGTTCGATTCCCGGCCAA < 41bp 1 0.736773956258643 1 0.834447264671326 experiment 0.526452087482713 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500950 chr1:161500947 . . 0 18 hm5C_associated_SNPs_3197 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500951 + 161500931 161500971 41 TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC TGCCTTCCAAGCAGTTAACCCGGGTTCGATTCCCGGCCAAC < 41bp 1 0.623309567858599 1 0.630387187004089 experiment 0.753380864282802 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500951 chr1:161500947 . . 0 17 hm5C_associated_SNPs_3198 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500957 + 161500937 161500977 41 CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGG CCAAGCAGTTAACCCGGGTTCGATTCCCGGCCAACGCAAGG < 41bp 1 0.172415717527199 1 0.0888853371143341 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500957 chr1:161500947 . . 0 11 hm5C_associated_SNPs_3199 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500962 + 161500942 161500982 41 CAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTT CAGTTAACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTT < 41bp 1 0.367951838700065 1 0.399043262004852 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500962 chr1:161500947 . . 0 6 hm5C_associated_SNPs_3200 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500963 + 161500943 161500983 41 AGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTT AGTTAACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTT < 41bp 1 0.302215336327414 1 0.568613529205322 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500963 chr1:161500947 . . 0 5 hm5C_associated_SNPs_3201 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500964 + 161500944 161500984 41 GTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTG GTTAACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTG < 41bp 1 0.506581698829762 1 0.281544506549835 experiment 0.986836602340475 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500964 chr1:161500947 . . 0 4 hm5C_associated_SNPs_3202 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500947 161500947 1 + G A rs189663649 161500967 + 161500947 161500987 41 GACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTGTCT AACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTGTCT < 41bp 1 0.0391235791380819 1 0.226445108652115 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500967 chr1:161500947 . . 0 1 hm5C_associated_SNPs_3203 0 0 15 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500951 + 161500931 161500971 41 TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAA < 41bp 1 0.569033881053135 1 0.573756814002991 experiment 0.86193223789373 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500951 chr1:161500971 . . 0 41 hm5C_associated_SNPs_3204 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500957 + 161500937 161500977 41 CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGG CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAAGCAAGG < 41bp 1 0.155536115750527 1 0.0847126245498657 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500957 chr1:161500971 . . 0 35 hm5C_associated_SNPs_3205 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500962 + 161500942 161500982 41 CAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTT CAGTTGACCCGGGTTCGATTCCCGGCCAAAGCAAGGGTTTT < 41bp 1 0.359715976342473 1 0.464684218168259 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500962 chr1:161500971 . . 0 30 hm5C_associated_SNPs_3206 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500963 + 161500943 161500983 41 AGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTT AGTTGACCCGGGTTCGATTCCCGGCCAAAGCAAGGGTTTTT < 41bp 1 0.31557827829069 1 0.536962151527405 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500963 chr1:161500971 . . 0 29 hm5C_associated_SNPs_3207 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500964 + 161500944 161500984 41 GTTGACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTG GTTGACCCGGGTTCGATTCCCGGCCAAAGCAAGGGTTTTTG < 41bp 1 0.520010242476245 1 0.309808999300003 experiment 0.959979515047511 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500964 chr1:161500971 . . 0 28 hm5C_associated_SNPs_3208 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500967 + 161500947 161500987 41 GACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTGTCT GACCCGGGTTCGATTCCCGGCCAAAGCAAGGGTTTTTGTCT < 41bp 1 0.186113031768337 1 0.425042659044266 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500967 chr1:161500971 . . 0 25 hm5C_associated_SNPs_3209 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161500971 161500971 1 + C A rs189592997 161500968 + 161500948 161500988 41 ACCCGGGTTCGATTCCCGGCCAACGCAAGGGTTTTTGTCTT ACCCGGGTTCGATTCCCGGCCAAAGCAAGGGTTTTTGTCTT < 41bp 1 0.344114787476187 1 0.512567043304443 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161500968 chr1:161500971 . . 0 24 hm5C_associated_SNPs_3210 0 0 28 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:161500880-161501020
64251 chr1 161582533 161582533 1 + A C rs73026086 161582530 + 161582510 161582550 41 GTTGGTGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGT GTTGGTGGTGTAGTGGTGAGCACCGCTGCCTTTCAAGCAGT < 41bp 1 0.652516259368413 1 0.366532742977142 experiment 0.694967481263174 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582530 chr1:161582533 . . 0 24 hm5C_associated_SNPs_3211 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582533 161582533 1 + A C rs73026086 161582535 + 161582515 161582555 41 TGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACG TGGTGTAGTGGTGAGCACCGCTGCCTTTCAAGCAGTTAACG < 41bp 1 0.296071001240686 1 0.333885788917542 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582535 chr1:161582533 . . 0 19 hm5C_associated_SNPs_3212 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582533 161582533 1 + A C rs73026086 161582539 + 161582519 161582559 41 GTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACGCGGG GTAGTGGTGAGCACCGCTGCCTTTCAAGCAGTTAACGCGGG < 41bp 1 0.0544127382565626 1 0.0787157714366913 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582539 chr1:161582533 . . 0 15 hm5C_associated_SNPs_3213 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582537 161582537 1 + G A rs528054926 161582530 + 161582510 161582550 41 GTTGGTGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGT GTTGGTGGTGTAGTGGTGAGCACAGCTACCTTTCAAGCAGT < 41bp 1 0.577571987574246 1 0.522678852081299 experiment 0.844856024851509 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582530 chr1:161582537 . . 0 28 hm5C_associated_SNPs_3214 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582537 161582537 1 + G A rs528054926 161582535 + 161582515 161582555 41 TGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACG TGGTGTAGTGGTGAGCACAGCTACCTTTCAAGCAGTTAACG < 41bp 1 0.197642502345231 1 0.19240215420723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582535 chr1:161582537 . . 0 23 hm5C_associated_SNPs_3215 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582537 161582537 1 + G A rs528054926 161582539 + 161582519 161582559 41 GTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACGCGGG GTAGTGGTGAGCACAGCTACCTTTCAAGCAGTTAACGCGGG < 41bp 1 0.0678515726190023 1 0.11850893497467 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582539 chr1:161582537 . . 0 19 hm5C_associated_SNPs_3216 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582549 161582549 1 + G A rs74127053 161582530 + 161582510 161582550 41 GTTGGTGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGT GTTGGTGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAAT < 41bp 1 0.61535292559516 1 0.451069593429565 experiment 0.769294148809681 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582530 chr1:161582549 . . 0 40 hm5C_associated_SNPs_3217 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582549 161582549 1 + G A rs74127053 161582535 + 161582515 161582555 41 TGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACG TGGTGTAGTGGTGAGCACAGCTGCCTTTCAAGCAATTAACG < 41bp 1 0.289885625297399 1 0.367526888847351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582535 chr1:161582549 . . 0 35 hm5C_associated_SNPs_3218 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582549 161582549 1 + G A rs74127053 161582539 + 161582519 161582559 41 GTAGTGGTGAGCACAGCTGCCTTTCAAGCAGTTAACGCGGG GTAGTGGTGAGCACAGCTGCCTTTCAAGCAATTAACGCGGG < 41bp 1 0.0591791268522735 1 0.0549453794956207 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582539 chr1:161582549 . . 0 31 hm5C_associated_SNPs_3219 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582549 161582549 1 + G A rs74127053 161582562 + 161582542 161582582 41 TCAAGCAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACG TCAAGCAATTAACGCGGGTTCGATTCCCGGGTAACGAAACG < 41bp 1 0.149156894920596 1 0.0744539797306061 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582562 chr1:161582549 . . 0 8 hm5C_associated_SNPs_3220 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582549 161582549 1 + G A rs74127053 161582567 + 161582547 161582587 41 CAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTT CAATTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTT < 41bp 1 0.544157755344331 1 0.627081036567688 experiment 0.911684489311338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582567 chr1:161582549 . . 0 3 hm5C_associated_SNPs_3221 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161582534-161582555
64251 chr1 161582570 161582570 1 + G A rs114193592 161582562 + 161582542 161582582 41 TCAAGCAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACG TCAAGCAGTTAACGCGGGTTCGATTCCCAGGTAACGAAACG < 41bp 1 0.149555020064383 1 0.057656317949295 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582562 chr1:161582570 . . 0 29 hm5C_associated_SNPs_3222 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582570 161582570 1 + G A rs114193592 161582567 + 161582547 161582587 41 CAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTT CAGTTAACGCGGGTTCGATTCCCAGGTAACGAAACGTTTTT < 41bp 1 0.302131355252739 1 0.602572321891785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582567 chr1:161582570 . . 0 24 hm5C_associated_SNPs_3223 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582571 161582571 1 + G A rs114835251 161582562 + 161582542 161582582 41 TCAAGCAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACG TCAAGCAGTTAACGCGGGTTCGATTCCCGAGTAACGAAACG < 41bp 1 0.160042905234812 1 0.0770199298858643 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582562 chr1:161582571 . . 0 30 hm5C_associated_SNPs_3224 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582571 161582571 1 + G A rs114835251 161582567 + 161582547 161582587 41 CAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTT CAGTTAACGCGGGTTCGATTCCCGAGTAACGAAACGTTTTT < 41bp 1 0.660693372561192 1 0.76154363155365 experiment 0.678613254877616 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582567 chr1:161582571 . . 0 25 hm5C_associated_SNPs_3225 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582572 161582572 1 + G A rs144176068 161582562 + 161582542 161582582 41 TCAAGCAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACG TCAAGCAGTTAACGCGGGTTCGATTCCCGGATAACGAAACG < 41bp 1 0.185717690490263 1 0.137460082769394 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582562 chr1:161582572 . . 0 31 hm5C_associated_SNPs_3226 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161582572 161582572 1 + G A rs144176068 161582567 + 161582547 161582587 41 CAGTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTT CAGTTAACGCGGGTTCGATTCCCGGATAACGAAACGTTTTT < 41bp 1 0.466446619740945 1 0.597394108772278 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582567 chr1:161582572 . . 0 26 hm5C_associated_SNPs_3227 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 161753841 161753841 1 + G A rs2271012 161753845 + 161753825 161753865 41 CAAGTTATTCAGTCTCGTCTCCTCGGTCAGTGGACTCTTAT CAAGTTATTCAGTCTCATCTCCTCGGTCAGTGGACTCTTAT < 41bp 1 0.222786115557703 1 0.23856520652771 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161753845 chr1:161753841 synonymous SNV . 0 17 hm5C_associated_SNPs_3229 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:161753812-161753845
64251 chr1 162493699 162493699 1 + G A rs545024877 162493709 + 162493689 162493729 41 GTGTCCCTGAGTAGAGGATGCTGCTATGCGTGAGTTCATGG GTGTCCCTGAATAGAGGATGCTGCTATGCGTGAGTTCATGG < 41bp 1 0.408422667664175 1 0.0371389389038086 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UHMK1 ENSG00000152332 UTR3 Human protein_coding chr1:162493709 chr1:162493699 . . 0 11 hm5C_associated_SNPs_3232 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:162493618-162493843
64251 chr1 162495283 162495283 1 + T C rs138731009 162495266 + 162495246 162495286 41 CATTGTACACCCAGAAAAGGCACATACAGTGATTATTTTGT CATTGTACACCCAGAAAAGGCACATACAGTGATTATTCTGT < 41bp 1 0.234864039742692 1 0.0821283161640167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UHMK1 ENSG00000152332 UTR3 Human protein_coding chr1:162495266 chr1:162495283 . . 0 38 hm5C_associated_SNPs_3233 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:162495243-162495334
64251 chr1 165600520 165600520 1 + A G rs536111350 165600527 + 165600507 165600547 41 TCCAGCTGTTCGAAGGTGATCCAGGTGAGTGCTAGCACCTG TCCAGCTGTTCGAGGGTGATCCAGGTGAGTGCTAGCACCTG < 41bp 1 0.733578822911471 1 0.851815104484558 experiment 0.532842354177057 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MGST3 ENSG00000143198 UTR5 Human protein_coding chr1:165600527 chr1:165600520 . . 0 14 hm5C_associated_SNPs_3237 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:165600480-165600520
64251 chr1 167389924 167389924 1 + A C rs564708514 167389934 + 167389914 167389954 41 AAGCCCTGCCAGGGAGAAGTCAGTAGTATTGCTGACTCACT AAGCCCTGCCCGGGAGAAGTCAGTAGTATTGCTGACTCACT < 41bp 1 0.535858011490808 1 0.502802550792694 experiment 0.928283977018384 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POU2F1 ENSG00000143190 UTR3 Human protein_coding chr1:167389934 chr1:167389924 . . 0 11 hm5C_associated_SNPs_3238 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:167389891-167389939
64251 chr1 167389925 167389925 1 + G C rs528639296 167389934 + 167389914 167389954 41 AAGCCCTGCCAGGGAGAAGTCAGTAGTATTGCTGACTCACT AAGCCCTGCCACGGAGAAGTCAGTAGTATTGCTGACTCACT < 41bp 1 0.530830322100162 1 0.389043986797333 experiment 0.938339355799676 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POU2F1 ENSG00000143190 UTR3 Human protein_coding chr1:167389934 chr1:167389925 . . 0 12 hm5C_associated_SNPs_3239 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:167389891-167389939
64251 chr1 167691280 167691280 1 + G C rs573492247 167691273 + 167691253 167691293 41 GGGAGCGCGGCGTGGAGGTGCCACCCGGCGCGGGTGGCGGA GGGAGCGCGGCGTGGAGGTGCCACCCGCCGCGGGTGGCGGA < 41bp 1 0.243809829072754 1 0.147665977478027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MPZL1 ENSG00000197965 UTR5 Human protein_coding chr1:167691273 chr1:167691280 . . 0 28 hm5C_associated_SNPs_3240 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:167691240-167691280
64251 chr1 167691280 167691280 1 + G C rs573492247 167691274 + 167691254 167691294 41 GGAGCGCGGCGTGGAGGTGCCACCCGGCGCGGGTGGCGGAG GGAGCGCGGCGTGGAGGTGCCACCCGCCGCGGGTGGCGGAG < 41bp 1 0.708552658632185 1 0.265285491943359 experiment 0.582894682735629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MPZL1 ENSG00000197965 UTR5 Human protein_coding chr1:167691274 chr1:167691280 . . 0 27 hm5C_associated_SNPs_3241 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:167691240-167691280
64251 chr1 167691280 167691280 1 + G C rs573492247 167691276 + 167691256 167691296 41 AGCGCGGCGTGGAGGTGCCACCCGGCGCGGGTGGCGGAGAG AGCGCGGCGTGGAGGTGCCACCCGCCGCGGGTGGCGGAGAG < 41bp 1 0.451638483172622 1 0.477971136569977 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MPZL1 ENSG00000197965 UTR5 Human protein_coding chr1:167691276 chr1:167691280 . . 0 25 hm5C_associated_SNPs_3242 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:167691240-167691280
64251 chr1 167691280 167691280 1 + G C rs573492247 167691277 + 167691257 167691297 41 GCGCGGCGTGGAGGTGCCACCCGGCGCGGGTGGCGGAGAGA GCGCGGCGTGGAGGTGCCACCCGCCGCGGGTGGCGGAGAGA < 41bp 1 0.467198138077128 1 0.517097055912018 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MPZL1 ENSG00000197965 UTR5 Human protein_coding chr1:167691277 chr1:167691280 . . 0 24 hm5C_associated_SNPs_3243 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:167691240-167691280
64251 chr1 167691434 167691434 1 + A C rs562954825 167691414 + 167691394 167691434 41 AGCGTCCGCCGGAGCCGGGGCGGTGATTGCAGCCCCAGACA AGCGTCCGCCGGAGCCGGGGCGGTGATTGCAGCCCCAGACC < 41bp 1 0.779049765747938 1 0.400341749191284 experiment 0.441900468504124 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MPZL1 ENSG00000197965 CDS Human protein_coding chr1:167691414 chr1:167691434 nonsynonymous SNV 0.052 0 41 hm5C_associated_SNPs_3244 0 0 7 DDX3X POSTAR2 ENCODE chr1:167691388-167691478
64251 chr1 167691434 167691434 1 + A C rs562954825 167691426 + 167691406 167691446 41 AGCCGGGGCGGTGATTGCAGCCCCAGACAGCCGGCGCTGGC AGCCGGGGCGGTGATTGCAGCCCCAGACCGCCGGCGCTGGC < 41bp 1 0.788944469592533 1 0.709418058395386 experiment 0.422111060814934 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MPZL1 ENSG00000197965 CDS Human protein_coding chr1:167691426 chr1:167691434 nonsynonymous SNV 0.052 0 29 hm5C_associated_SNPs_3245 0 0 7 DDX3X POSTAR2 ENCODE chr1:167691388-167691478
64251 chr1 167758321 167758321 1 + A C rs183563193 167758336 + 167758316 167758356 41 ATAACAGCTTCATGGTGCCTCAAAGACTGTTGAGGTTAATG ATAACCGCTTCATGGTGCCTCAAAGACTGTTGAGGTTAATG < 41bp 1 0.28285821798867 1 0.443206250667572 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPZL1 ENSG00000197965 UTR3 Human protein_coding chr1:167758336 chr1:167758321 . . 0 6 hm5C_associated_SNPs_3246 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:167758315-167758391
64251 chr1 168014204 168014204 1 + T A rs41271647 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT ATGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT < 41bp 1 0.424060306510313 1 0.523734390735626 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014204 nonsynonymous SNV 0.025 0 1 hm5C_associated_SNPs_3247 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:168014200-168014220
64251 chr1 171527223 171527223 1 + C G rs556975367 171527220 + 171527200 171527240 41 ACAGTCACATGGCACTCTGACAGCTGAATTATGGGATAACA ACAGTCACATGGCACTCTGACAGGTGAATTATGGGATAACA < 41bp 1 0.455627359412151 1 0.755457282066345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171527220 chr1:171527223 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_3248 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:171527127-171527239
64251 chr1 171558643 171558643 1 + C A rs116404787 171558656 + 171558636 171558676 41 CATGAGCCATGCTCGTTTGCCACATGTAGCCAGGGGTCCTT CATGAGCAATGCTCGTTTGCCACATGTAGCCAGGGGTCCTT < 41bp 1 0.399868629386618 1 0.181524455547333 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171558656 chr1:171558643 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_3249 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:171558559-171558733
64251 chr1 171763627 171763627 1 + A G rs61733150 171763629 + 171763609 171763649 41 CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTTAAAA CCCAGCATTTGTGGAGCAGTCTTTTCTACAGAAGGTTAAAA < 41bp 1 0.123421760829538 1 0.0714583992958069 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763629 chr1:171763627 synonymous SNV . 0 19 hm5C_associated_SNPs_3250 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:171763613-171763638
64251 chr1 172579544 172579544 1 + G A rs189837722 172579557 + 172579537 172579577 41 AAAAGTAGATGGGATTGTGTCAATCTTGGTTAATGAGCTAC AAAAGTAAATGGGATTGTGTCAATCTTGGTTAATGAGCTAC < 41bp 1 0.110553129325265 1 0.177890688180923 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SUCO ENSG00000094975 UTR3 Human protein_coding chr1:172579557 chr1:172579544 . . 0 8 hm5C_associated_SNPs_3251 0 0 5 EWSR1 POSTAR2 SRX029344 chr1:172579522-172579547
64251 chr1 174969101 174969101 1 + G A rs548602563 174969118 + 174969098 174969138 41 CTCGCGGTGGGCGGTGGCGGCGGCTGCCTCGCGAAGGTTCG CTCACGGTGGGCGGTGGCGGCGGCTGCCTCGCGAAGGTTCG < 41bp 1 0.746532631117462 1 0.610595524311066 experiment 0.506934737765076 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CACYBP ENSG00000116161 UTR5 Human protein_coding chr1:174969118 chr1:174969101 . . 0 4 hm5C_associated_SNPs_3253 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr1:174969093-174969123
64251 chr1 174969124 174969124 1 + C T rs377745745 174969118 + 174969098 174969138 41 CTCGCGGTGGGCGGTGGCGGCGGCTGCCTCGCGAAGGTTCG CTCGCGGTGGGCGGTGGCGGCGGCTGTCTCGCGAAGGTTCG < 41bp 1 0.793233030921258 1 0.640555739402771 experiment 0.413533938157484 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CACYBP ENSG00000116161 UTR5 Human protein_coding chr1:174969118 chr1:174969124 . . 0 27 hm5C_associated_SNPs_3254 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:174969104-174969128
64251 chr1 178063227 178063227 1 + C G rs116226039 178063207 + 178063187 178063227 41 GGCGGCGACGCCCCCAAGCCCAGCCCTGCCCGGCCCCGCTC GGCGGCGACGCCCCCAAGCCCAGCCCTGCCCGGCCCCGCTG < 41bp 1 0.749361621165514 1 0.429466098546982 experiment 0.501276757668972 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RASAL2 ENSG00000075391 UTR5 Human protein_coding chr1:178063207 chr1:178063227 . . 0 41 hm5C_associated_SNPs_3255 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:178063220-178063240
64251 chr1 179064875 179064875 1 + A G rs1046385 179064874 + 179064854 179064894 41 GAGAATACACTCTAGGTTTGCAGGCTGGTGGGCTTTCAAAT GAGAATACACTCTAGGTTTGCGGGCTGGTGGGCTTTCAAAT < 41bp 1 0.685011239712478 1 0.858759820461273 experiment 0.629977520575044 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR3A ENSG00000186283 UTR3 Human protein_coding chr1:179064874 chr1:179064875 . . 0 22 hm5C_associated_SNPs_3262 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:179064864-179064885
64251 chr1 179064882 179064882 1 + T G rs562523296 179064874 + 179064854 179064894 41 GAGAATACACTCTAGGTTTGCAGGCTGGTGGGCTTTCAAAT GAGAATACACTCTAGGTTTGCAGGCTGGGGGGCTTTCAAAT < 41bp 1 0.674011897128281 1 0.726349592208862 experiment 0.651976205743438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR3A ENSG00000186283 UTR3 Human protein_coding chr1:179064874 chr1:179064882 . . 0 29 hm5C_associated_SNPs_3263 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:179064864-179064885
64251 chr1 179064884 179064884 1 + G A rs150424170 179064874 + 179064854 179064894 41 GAGAATACACTCTAGGTTTGCAGGCTGGTGGGCTTTCAAAT GAGAATACACTCTAGGTTTGCAGGCTGGTGAGCTTTCAAAT < 41bp 1 0.701322870722223 1 0.756938099861145 experiment 0.597354258555554 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR3A ENSG00000186283 UTR3 Human protein_coding chr1:179064874 chr1:179064884 . . 0 31 hm5C_associated_SNPs_3264 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:179064864-179064885
64251 chr1 179323919 179323919 1 + A G rs4652366 179323917 + 179323897 179323937 41 ACTTCCATTTTATAAGATGCCCATTTCTAATACAATGTGTG ACTTCCATTTTATAAGATGCCCGTTTCTAATACAATGTGTG < 41bp 1 0.0340494215980903 1 0.039831131696701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOAT1 ENSG00000057252 UTR3 Human protein_coding chr1:179323917 chr1:179323919 . . 0 23 hm5C_associated_SNPs_3265 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:179323898-179323919
64251 chr1 179323919 179323919 1 + A G rs4652366 179323918 + 179323898 179323938 41 CTTCCATTTTATAAGATGCCCATTTCTAATACAATGTGTGT CTTCCATTTTATAAGATGCCCGTTTCTAATACAATGTGTGT < 41bp 1 0.0291035760913909 1 0.0262992978096008 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOAT1 ENSG00000057252 UTR3 Human protein_coding chr1:179323918 chr1:179323919 . . 0 22 hm5C_associated_SNPs_3266 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:179323898-179323919
64251 chr1 179876988 179876988 1 + C A rs609521 179876984 + 179876964 179877004 41 ACTTCACAGCTCATGATAAGCAACCTTCAGTGCTAAGTAAG ACTTCACAGCTCATGATAAGCAACATTCAGTGCTAAGTAAG < 41bp 1 0.711014746119395 1 0.749275803565979 experiment 0.577970507761211 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179876984 chr1:179876988 nonsynonymous SNV 0.011 1 25 hm5C_associated_SNPs_3267 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:179876987-179877020
64251 chr1 180049723 180049723 1 + A T rs149251843 180049727 + 180049707 180049747 41 ATAGGACTGGAGGACAATGTCACCTGCCTATCAAGTCCCAT ATAGGACTGGAGGACATTGTCACCTGCCTATCAAGTCCCAT < 41bp 1 0.457992173802584 1 0.247633516788483 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180049727 chr1:180049723 nonsynonymous SNV 0.285 0 17 hm5C_associated_SNPs_3268 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:180049698-180049733
64251 chr1 180124128 180124128 1 + C T rs80203913 180124116 + 180124096 180124136 41 GCTGTGGCTGCTCGCGGTTCCCGGCGCTAACGCGGCCCCGC GCTGTGGCTGCTCGCGGTTCCCGGCGCTAACGTGGCCCCGC < 41bp 1 0.719088244821782 1 0.919148683547974 experiment 0.561823510356437 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180124116 chr1:180124128 nonsynonymous SNV 0.159 1 33 hm5C_associated_SNPs_3269 0 0 3 DDX3X POSTAR2 ENCODE chr1:180124005-180124142
64251 chr1 180165699 180165699 1 + A C rs3738115 180165711 + 180165691 180165731 41 CCCCCACAAACACCACCCCACATGTGCCGGCTGAGGGACCT CCCCCACACACACCACCCCACATGTGCCGGCTGAGGGACCT < 41bp 1 0.236755265994949 1 0.0185408294200897 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180165711 chr1:180165699 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_3270 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:180165686-180165714
64251 chr1 180165718 180165718 1 + C T rs145708234 180165711 + 180165691 180165731 41 CCCCCACAAACACCACCCCACATGTGCCGGCTGAGGGACCT CCCCCACAAACACCACCCCACATGTGCTGGCTGAGGGACCT < 41bp 1 0.217556254647765 1 0.0502126812934875 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180165711 chr1:180165718 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_3271 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:180165699-180165732
64251 chr1 180166631 180166631 1 + G A rs4652482 180166624 + 180166604 180166644 41 GGGGCTCCGCCCACCCTGCTCCCTTCCGGACAATGAAGAAG GGGGCTCCGCCCACCCTGCTCCCTTCCAGACAATGAAGAAG < 41bp 1 0.079254216044148 1 0.114455342292786 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QSOX1 ENSG00000116260 UTR3 Human protein_coding chr1:180166624 chr1:180166631 . . 0 28 hm5C_associated_SNPs_3272 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:180166631-180166632
64251 chr1 180166631 180166631 1 + G A rs4652482 180166625 + 180166605 180166645 41 GGGCTCCGCCCACCCTGCTCCCTTCCGGACAATGAAGAAGC GGGCTCCGCCCACCCTGCTCCCTTCCAGACAATGAAGAAGC < 41bp 1 0.0227191036085134 1 0.216059535741806 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QSOX1 ENSG00000116260 UTR3 Human protein_coding chr1:180166625 chr1:180166631 . . 0 27 hm5C_associated_SNPs_3273 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:180166631-180166632
64251 chr1 180794046 180794046 1 + G A rs151270778 180794028 + 180794008 180794048 41 GCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCCGAG GCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCCAAG < 41bp 1 0.347577722000544 1 0.481764554977417 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180794028 chr1:180794046 synonymous SNV . 0 39 hm5C_associated_SNPs_3274 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:180794021-180794056
64251 chr1 181058643 181058643 1 + A C rs1361365 181058642 + 181058622 181058662 41 CTGCCTGCTGCTGCGCGCCGCAACCAGCGGAGGACGAGCCC CTGCCTGCTGCTGCGCGCCGCCACCAGCGGAGGACGAGCCC < 41bp 1 0.159156540758353 1 0.132958352565765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IER5 ENSG00000162783 CDS Human protein_coding chr1:181058642 chr1:181058643 nonsynonymous SNV 0.139 1 22 hm5C_associated_SNPs_3279 0 0 1 FXR2 POSTAR2 ENCODE chr1:181058596-181058659
64251 chr1 181058891 181058891 1 + C T rs3747951 181058893 + 181058873 181058913 41 GGACTCCTACGGAAAAGCCCCGGGGGCGGCAGAGAGGAAGA GGACTCCTACGGAAAAGCTCCGGGGGCGGCAGAGAGGAAGA < 41bp 1 0.795460571369062 1 0.861213624477386 experiment 0.409078857261876 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout IER5 ENSG00000162783 CDS Human protein_coding chr1:181058893 chr1:181058891 nonsynonymous SNV 0.987 2 19 hm5C_associated_SNPs_3280 0 0 6 DGCR8 POSTAR2 ENCODE chr1:181058868-181058922
64251 chr1 181058891 181058891 1 + C T rs3747951 181058899 + 181058879 181058919 41 CTACGGAAAAGCCCCGGGGGCGGCAGAGAGGAAGAGGAGGG CTACGGAAAAGCTCCGGGGGCGGCAGAGAGGAAGAGGAGGG < 41bp 1 0.78620649792749 1 0.474470436573029 experiment 0.42758700414502 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout IER5 ENSG00000162783 CDS Human protein_coding chr1:181058899 chr1:181058891 nonsynonymous SNV 0.987 2 13 hm5C_associated_SNPs_3281 0 0 6 DGCR8 POSTAR2 ENCODE chr1:181058868-181058922
64251 chr1 181059835 181059835 1 + A G rs78185242 181059844 + 181059824 181059864 41 GTTTTGTAGATATGGTGACTCCAGTCTTTGTTGTATAAAGG GTTTTGTAGATGTGGTGACTCCAGTCTTTGTTGTATAAAGG < 41bp 1 0.17430966330818 1 0.578845858573914 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IER5 ENSG00000162783 UTR3 Human protein_coding chr1:181059844 chr1:181059835 . . 0 12 hm5C_associated_SNPs_3282 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:181059802-181059939
64251 chr1 181059835 181059835 1 + A G rs78185242 181059845 + 181059825 181059865 41 TTTTGTAGATATGGTGACTCCAGTCTTTGTTGTATAAAGGT TTTTGTAGATGTGGTGACTCCAGTCTTTGTTGTATAAAGGT < 41bp 1 0.161720817059368 1 0.447928428649902 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IER5 ENSG00000162783 UTR3 Human protein_coding chr1:181059845 chr1:181059835 . . 0 11 hm5C_associated_SNPs_3283 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:181059802-181059939
64251 chr1 183083724 183083724 1 + C T rs201041731 183083740 + 183083720 183083760 41 GTTCCACTGGCCATGGGGGCCACTGTACCAACTGCCAGGAT GTTCTACTGGCCATGGGGGCCACTGTACCAACTGCCAGGAT < 41bp 1 0.264125711921677 1 0.124532371759415 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083740 chr1:183083724 synonymous SNV . 0 5 hm5C_associated_SNPs_3284 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:183083698-183083736
64251 chr1 183086460 183086460 1 + G A rs557108773 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGAATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG < 41bp 1 0.721117921894575 1 0.848409414291382 experiment 0.55776415621085 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086460 nonsynonymous SNV 0.999 2 8 hm5C_associated_SNPs_3285 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:183086440-183086460
64251 chr1 183086486 183086486 1 + T G rs61752348 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGGATGGGTGGCGTGCGGAACAGAGAGAGGGCTCTG < 41bp 1 0.745222893483494 1 0.886111617088318 experiment 0.509554213033012 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086486 nonsynonymous SNV 0.985 1 34 hm5C_associated_SNPs_3286 0 0 1 SND1 POSTAR2 ENCODE chr1:183086457-183086499
64251 chr1 183086559 183086559 1 + C G rs150392886 183086575 + 183086555 183086595 41 TCCTCGGTACTTCATTGCTCCTGGTAAGTAAGGCTAGAAAG TCCTGGGTACTTCATTGCTCCTGGTAAGTAAGGCTAGAAAG < 41bp 1 0.368674174186047 1 0.140183627605438 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086575 chr1:183086559 nonsynonymous SNV 0.991 2 5 hm5C_associated_SNPs_3287 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183086515-183086560
64251 chr1 183101625 183101625 1 + G A rs12095652 183101623 + 183101603 183101643 41 ACAACCTGCTTCTGAGGACACTGGCAGGAGAAAATCAAACA ACAACCTGCTTCTGAGGACACTAGCAGGAGAAAATCAAACA < 41bp 1 0.191336958026183 1 0.198517382144928 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101623 chr1:183101625 synonymous SNV . 0 23 hm5C_associated_SNPs_3288 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chr1 183101625 183101625 1 + G A rs12095652 183101642 + 183101622 183101662 41 ACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGC ACTAGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGC < 41bp 1 0.702387727785917 1 0.580332458019257 experiment 0.595224544428167 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101642 chr1:183101625 synonymous SNV . 0 4 hm5C_associated_SNPs_3289 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chr1 183101625 183101625 1 + G A rs12095652 183101645 + 183101625 183101665 41 GGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTA AGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTA < 41bp 1 0.0236369533650889 1 0.0929311513900757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101645 chr1:183101625 synonymous SNV . 0 1 hm5C_associated_SNPs_3290 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chr1 192778199 192778199 1 + A G rs143288784 192778185 + 192778165 192778205 41 AGCCGCAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGC AGCCGCAAACAGCCGGGGCTCCAGCGGGAGAACGGTAATGC < 41bp 1 0.478887527030664 1 0.496075958013535 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS2 ENSG00000116741 UTR5 Human protein_coding chr1:192778185 chr1:192778199 . . 0 35 hm5C_associated_SNPs_3293 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:192778199-192778200
64251 chr1 198288709 198288709 1 + A G rs6679100 198288708 + 198288688 198288728 41 TGAAAGTATTTTGTGCAAGTCATACCTCCCCATTTATGTCT TGAAAGTATTTTGTGCAAGTCGTACCTCCCCATTTATGTCT < 41bp 1 0.0874653920381939 1 0.0217593610286713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEK7 ENSG00000151414 UTR3 Human protein_coding chr1:198288708 chr1:198288709 . . 0 22 hm5C_associated_SNPs_3300 0 0 7 CELF2 POSTAR2 GSE71264,GSM1831631 chr1:198288698-198288719
64251 chr1 200817238 200817238 1 + A G rs139956440 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGGGATCACTCGTTCTATTAGTAATGAAGGA < 41bp 1 0.102019198406127 1 0.498439699411392 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817238 synonymous SNV . 0 14 hm5C_associated_SNPs_3301 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200817234-200817252
64251 chr1 200817239 200817239 1 + A C rs553031275 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGGACTCACTCGTTCTATTAGTAATGAAGGA < 41bp 1 0.0826186718845279 1 0.692994594573975 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817239 nonsynonymous SNV 1.000 0 15 hm5C_associated_SNPs_3302 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200817234-200817252
64251 chr1 200817258 200817258 1 + A C rs147174162 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGGAATCACTCGTTCTATTAGTACTGAAGGA < 41bp 1 0.0965607712302262 1 0.578476071357727 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817258 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_3303 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:200817240-200817278
64251 chr1 201790826 201790826 1 + T C rs1032524 201790842 + 201790822 201790862 41 GATGTACAATACATTGGGGGCAGAAGATCTGGGATCAATTA GATGCACAATACATTGGGGGCAGAAGATCTGGGATCAATTA < 41bp 1 0.190991945172056 1 0.395996600389481 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IPO9-AS1 ENSG00000231871 ncRNA_intronic Human antisense chr1:201790842 chr1:201790826 . . 0 5 hm5C_associated_SNPs_3321 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:201790825-201790847
64251 chr1 201966486 201966486 1 + A C rs139712457 201966479 + 201966459 201966499 41 CTTCATGCCACCGTCCTTTCCATTTGGAGGAATGGAGAACC CTTCATGCCACCGTCCTTTCCATTTGGCGGAATGGAGAACC < 41bp 1 0.173999518891273 1 0.184468179941177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966479 chr1:201966486 synonymous SNV . 0 28 hm5C_associated_SNPs_3323 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:201966462-201966500
64251 chr1 201966541 201966541 1 + C T rs79980228 201966545 + 201966525 201966565 41 CCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATCATCC CCTGCTAGCTGGGGACTGCTCCTTGGCAGATGTCATCATCC < 41bp 1 0.211261396007432 1 0.179242759943008 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966545 chr1:201966541 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_3324 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201966505-201966553
64251 chr1 203787700 203787700 1 + T A rs4951260 203787706 + 203787686 203787726 41 ATTTGTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGA ATTTGTTTACAGGGAGACAGCTGCCCATTCCGTCACTGTGA < 41bp 1 0.426255065061423 1 0.0765998065471649 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787706 chr1:203787700 synonymous SNV . 0 15 hm5C_associated_SNPs_3331 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787700 203787700 1 + T A rs4951260 203787710 + 203787690 203787730 41 GTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCT GTTTACAGGGAGACAGCTGCCCATTCCGTCACTGTGAAGCT < 41bp 1 0.0785753584439397 1 0.0839310884475708 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787710 chr1:203787700 synonymous SNV . 0 11 hm5C_associated_SNPs_3332 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787700 203787700 1 + T A rs4951260 203787711 + 203787691 203787731 41 TTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCTG TTTACAGGGAGACAGCTGCCCATTCCGTCACTGTGAAGCTG < 41bp 1 0.047397589471489 1 0.0639886856079102 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787711 chr1:203787700 synonymous SNV . 0 10 hm5C_associated_SNPs_3333 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 204521372 204521372 1 + G C rs192973436 204521359 + 204521339 204521379 41 TGCGGTGAGCTGAGATTGCGCCATTGCACCCCAGCCTGGGC TGCGGTGAGCTGAGATTGCGCCATTGCACCCCACCCTGGGC < 41bp 1 0.113171947046739 1 0.0763613283634186 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521359 chr1:204521372 . . 0 34 hm5C_associated_SNPs_3339 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521360 + 204521340 204521380 41 GCGGTGAGCTGAGATTGCGCCATTGCACCCCAGCCTGGGCA GCGGTGAGCTGAGATTGCGCCATTGCACCCCACCCTGGGCA < 41bp 1 0.151952983798985 1 0.435360014438629 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521360 chr1:204521372 . . 0 33 hm5C_associated_SNPs_3340 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521365 + 204521345 204521385 41 GAGCTGAGATTGCGCCATTGCACCCCAGCCTGGGCAACAAT GAGCTGAGATTGCGCCATTGCACCCCACCCTGGGCAACAAT < 41bp 1 0.15842757904482 1 0.282840192317963 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521365 chr1:204521372 . . 0 28 hm5C_associated_SNPs_3341 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521367 + 204521347 204521387 41 GCTGAGATTGCGCCATTGCACCCCAGCCTGGGCAACAATAG GCTGAGATTGCGCCATTGCACCCCACCCTGGGCAACAATAG < 41bp 1 0.379617102105118 1 0.0716653764247894 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521367 chr1:204521372 . . 0 26 hm5C_associated_SNPs_3342 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521368 + 204521348 204521388 41 CTGAGATTGCGCCATTGCACCCCAGCCTGGGCAACAATAGC CTGAGATTGCGCCATTGCACCCCACCCTGGGCAACAATAGC < 41bp 1 0.0261953163224249 1 0.0875405967235565 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521368 chr1:204521372 . . 0 25 hm5C_associated_SNPs_3343 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521369 + 204521349 204521389 41 TGAGATTGCGCCATTGCACCCCAGCCTGGGCAACAATAGCG TGAGATTGCGCCATTGCACCCCACCCTGGGCAACAATAGCG < 41bp 1 0.0366678641555845 1 0.0413037240505219 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521369 chr1:204521372 . . 0 24 hm5C_associated_SNPs_3344 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521370 + 204521350 204521390 41 GAGATTGCGCCATTGCACCCCAGCCTGGGCAACAATAGCGA GAGATTGCGCCATTGCACCCCACCCTGGGCAACAATAGCGA < 41bp 1 0.0862657127787511 1 0.311015278100967 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521370 chr1:204521372 . . 0 23 hm5C_associated_SNPs_3345 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521373 + 204521353 204521393 41 ATTGCGCCATTGCACCCCAGCCTGGGCAACAATAGCGAAAC ATTGCGCCATTGCACCCCACCCTGGGCAACAATAGCGAAAC < 41bp 1 0.12848805650509 1 0.121059089899063 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521373 chr1:204521372 . . 0 20 hm5C_associated_SNPs_3346 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521374 + 204521354 204521394 41 TTGCGCCATTGCACCCCAGCCTGGGCAACAATAGCGAAACT TTGCGCCATTGCACCCCACCCTGGGCAACAATAGCGAAACT < 41bp 1 0.498639150101109 1 0.228962957859039 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521374 chr1:204521372 . . 0 19 hm5C_associated_SNPs_3347 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521372 204521372 1 + G C rs192973436 204521379 + 204521359 204521399 41 CCATTGCACCCCAGCCTGGGCAACAATAGCGAAACTGTCTC CCATTGCACCCCACCCTGGGCAACAATAGCGAAACTGTCTC < 41bp 1 0.254965666462014 1 0.0682034194469452 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521379 chr1:204521372 . . 0 14 hm5C_associated_SNPs_3348 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521362-204521383
64251 chr1 204521516 204521516 1 + T A rs72644181 204521511 + 204521491 204521531 41 CCCAGGCTGGAGTGCAATGGCATGATCTCTGCTCACCGCAA CCCAGGCTGGAGTGCAATGGCATGAACTCTGCTCACCGCAA < 41bp 1 0.611007784164539 1 0.673057317733765 experiment 0.777984431670922 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521511 chr1:204521516 . . 0 26 hm5C_associated_SNPs_3349 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521506-204521527
64251 chr1 204521520 204521520 1 + T C rs141321778 204521511 + 204521491 204521531 41 CCCAGGCTGGAGTGCAATGGCATGATCTCTGCTCACCGCAA CCCAGGCTGGAGTGCAATGGCATGATCTCCGCTCACCGCAA < 41bp 1 0.643501752026819 1 0.565849363803864 experiment 0.712996495946362 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204521511 chr1:204521520 . . 0 30 hm5C_associated_SNPs_3350 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:204521506-204521527
64251 chr1 204525554 204525554 1 + G A rs147845679 204525547 + 204525527 204525567 41 CTAAGAAATTGAGGTCAGGCCAGGCGCGGTGGTTCACTCCT CTAAGAAATTGAGGTCAGGCCAGGCGCAGTGGTTCACTCCT < 41bp 1 0.583482669235138 1 0.489731281995773 experiment 0.833034661529723 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204525547 chr1:204525554 . . 0 28 hm5C_associated_SNPs_3377 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:204525502-204525560
64251 chr1 204525556 204525556 1 + T G rs561059099 204525547 + 204525527 204525567 41 CTAAGAAATTGAGGTCAGGCCAGGCGCGGTGGTTCACTCCT CTAAGAAATTGAGGTCAGGCCAGGCGCGGGGGTTCACTCCT < 41bp 1 0.622084968203294 1 0.374592781066895 experiment 0.755830063593412 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MDM4 ENSG00000198625 UTR3 Human protein_coding chr1:204525547 chr1:204525556 . . 0 30 hm5C_associated_SNPs_3378 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:204525502-204525560
64251 chr1 206821286 206821286 1 + G A rs146834595 206821305 + 206821285 206821325 41 CGTCAAGCAGCTGAGGAGATCCGGATTTTGGAGCATCTTAA CATCAAGCAGCTGAGGAGATCCGGATTTTGGAGCATCTTAA < 41bp 1 0.564756754268132 1 0.556938707828522 experiment 0.870486491463736 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821305 chr1:206821286 nonsynonymous SNV 0.993 3 2 hm5C_associated_SNPs_3381 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:206821285-206821286
64251 chr1 206902144 206902144 1 + G A rs145730948 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGGATCGTGGATGTATACGAGAATCT < 41bp 1 0.502334658608975 1 0.21772712469101 experiment 0.995330682782051 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902144 synonymous SNV . 0 30 hm5C_associated_SNPs_3382 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:206902123-206902184
64251 chr1 207967325 207967325 1 + A G rs2724390 207967310 + 207967290 207967330 41 TTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTT TTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTGTTCTT < 41bp 1 0.0714736437141878 1 0.0860656201839447 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CD46 ENSG00000117335 UTR3 Human protein_coding chr1:207967310 chr1:207967325 . . 0 36 hm5C_associated_SNPs_3383 1 0 32 MOV10 POSTAR2 GSE37524,GSM921128 chr1:207967250-207967375
64251 chr1 207967325 207967325 1 + A G rs2724390 207967311 + 207967291 207967331 41 TTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTT TTTTGTTCAAAGATTAATGCCAACTCTTAAGATTGTTCTTT < 41bp 1 0.198013874844999 1 0.0465032160282135 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CD46 ENSG00000117335 UTR3 Human protein_coding chr1:207967311 chr1:207967325 . . 0 35 hm5C_associated_SNPs_3384 1 0 32 MOV10 POSTAR2 GSE37524,GSM921128 chr1:207967250-207967375
64251 chr1 207967326 207967326 1 + T C rs146017739 207967310 + 207967290 207967330 41 TTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTT TTTTTGTTCAAAGATTAATGCCAACTCTTAAGATTACTCTT < 41bp 1 0.0776860403817698 1 0.0436117947101593 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CD46 ENSG00000117335 UTR3 Human protein_coding chr1:207967310 chr1:207967326 . . 0 37 hm5C_associated_SNPs_3385 0 0 32 MOV10 POSTAR2 GSE37524,GSM921128 chr1:207967250-207967375
64251 chr1 207967326 207967326 1 + T C rs146017739 207967311 + 207967291 207967331 41 TTTTGTTCAAAGATTAATGCCAACTCTTAAGATTATTCTTT TTTTGTTCAAAGATTAATGCCAACTCTTAAGATTACTCTTT < 41bp 1 0.232414088503121 1 0.0459014773368835 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CD46 ENSG00000117335 UTR3 Human protein_coding chr1:207967311 chr1:207967326 . . 0 36 hm5C_associated_SNPs_3386 0 0 32 MOV10 POSTAR2 GSE37524,GSM921128 chr1:207967250-207967375
64251 chr1 212459226 212459226 1 + G A rs562670692 212459231 + 212459211 212459251 41 CCGTCAGCCCCGGGAGCTCGCCGCGCGCCGGGGACCAGGAA CCGTCAGCCCCGGGAACTCGCCGCGCGCCGGGGACCAGGAA < 41bp 1 0.784138116301117 1 0.684025645256042 experiment 0.431723767397765 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5A ENSG00000066027 UTR5 Human protein_coding chr1:212459231 chr1:212459226 . . 0 16 hm5C_associated_SNPs_3388 0 0 2 DDX3X POSTAR2 ENCODE chr1:212459217-212459370
64251 chr1 212619339 212619339 1 + T C rs4804 212619354 + 212619334 212619374 41 AAGGATGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT AAGGACGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT < 41bp 1 0.328168590914436 1 0.117375016212463 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NENF ENSG00000117691 CDS Human protein_coding chr1:212619354 chr1:212619339 synonymous SNV . 0 6 hm5C_associated_SNPs_3389 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212619229-212619482
64251 chr1 212793050 212793050 1 + A G rs1803173 212793049 + 212793029 212793069 41 GAGGGCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCC GAGGGCCTGCAGTGATTCAGCGGGCCCTTCCCATTCTGCCC < 41bp 1 0.785468803044143 1 0.934838831424713 experiment 0.429062393911714 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793049 chr1:212793050 . . 0 22 hm5C_associated_SNPs_3390 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212793014-212793072
64251 chr1 212793050 212793050 1 + A G rs1803173 212793053 + 212793033 212793073 41 GCCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGA GCCTGCAGTGATTCAGCGGGCCCTTCCCATTCTGCCCCAGA < 41bp 1 0.104626002778369 1 0.0561382174491882 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793053 chr1:212793050 . . 0 18 hm5C_associated_SNPs_3391 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212793014-212793072
64251 chr1 212793050 212793050 1 + A G rs1803173 212793054 + 212793034 212793074 41 CCTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAG CCTGCAGTGATTCAGCGGGCCCTTCCCATTCTGCCCCAGAG < 41bp 1 0.0277962522231986 1 0.0585522651672363 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793054 chr1:212793050 . . 0 17 hm5C_associated_SNPs_3392 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212793014-212793072
64251 chr1 212793050 212793050 1 + A G rs1803173 212793055 + 212793035 212793075 41 CTGCAGTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGT CTGCAGTGATTCAGCGGGCCCTTCCCATTCTGCCCCAGAGT < 41bp 1 0.132416218209266 1 0.0498566627502441 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793055 chr1:212793050 . . 0 16 hm5C_associated_SNPs_3393 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212793014-212793072
64251 chr1 212793050 212793050 1 + A G rs1803173 212793060 + 212793040 212793080 41 GTGATTCAGCAGGCCCTTCCCATTCTGCCCCAGAGTGGGTC GTGATTCAGCGGGCCCTTCCCATTCTGCCCCAGAGTGGGTC < 41bp 1 0.204848296698618 1 0.138015478849411 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793060 chr1:212793050 . . 0 11 hm5C_associated_SNPs_3394 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212793014-212793072
64251 chr1 212793832 212793832 1 + G A rs569236636 212793848 + 212793828 212793868 41 GGGTGGTACCCAGGCTTTAGCATTATTGGATGTCAATAGCA GGGTAGTACCCAGGCTTTAGCATTATTGGATGTCAATAGCA < 41bp 1 0.413198957144825 1 0.17647910118103 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793848 chr1:212793832 . . 0 5 hm5C_associated_SNPs_3395 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212793777-212793832
64251 chr1 212793849 212793849 1 + A G rs1126700 212793848 + 212793828 212793868 41 GGGTGGTACCCAGGCTTTAGCATTATTGGATGTCAATAGCA GGGTGGTACCCAGGCTTTAGCGTTATTGGATGTCAATAGCA < 41bp 1 0.468348215329628 1 0.410795569419861 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793848 chr1:212793849 . . 0 22 hm5C_associated_SNPs_3396 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212793789-212793859
64251 chr1 214794279 214794279 1 + G A rs114104425 214794259 + 214794239 214794279 41 ACAATTCTAGCAGTCCTCATCTTTTGGATCAATTAAAAGCG ACAATTCTAGCAGTCCTCATCTTTTGGATCAATTAAAAGCA < 41bp 1 0.0399663746329679 1 0.147414118051529 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214794259 chr1:214794279 synonymous SNV . 0 41 hm5C_associated_SNPs_3397 0 0 1 GRWD1 POSTAR2 ENCODE chr1:214794265-214794284
64251 chr1 214814504 214814504 1 + A G rs549879703 214814517 + 214814497 214814537 41 ACTCTCTAAAGGAGCTACAACTTTTATCCGAAACCCTAAGC ACTCTCTGAAGGAGCTACAACTTTTATCCGAAACCCTAAGC < 41bp 1 0.0549833656114267 1 0.069490522146225 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814517 chr1:214814504 synonymous SNV . 0 8 hm5C_associated_SNPs_3398 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr1 214814504 214814504 1 + A G rs549879703 214814524 + 214814504 214814544 41 AAAGGAGCTACAACTTTTATCCGAAACCCTAAGCTTGGAGA GAAGGAGCTACAACTTTTATCCGAAACCCTAAGCTTGGAGA < 41bp 1 0.230989413730343 1 0.419374376535416 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814524 chr1:214814504 synonymous SNV . 0 1 hm5C_associated_SNPs_3399 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr1 214819463 214819463 1 + G A rs62623663 214819453 + 214819433 214819473 41 ATTCTTGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT ATTCTTGATGCCGAGAATTCCAAAGCAGAAATAGAGACTCT < 41bp 1 0.311043187140709 1 0.552859127521515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819453 chr1:214819463 nonsynonymous SNV 0.912 0 31 hm5C_associated_SNPs_3400 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819343-214819493
64251 chr1 215740806 215740806 1 + C T rs540761081 215740810 + 215740790 215740830 41 CGCGAAAGGTGGAGGCCGGGCCGCCCTTGTGCACCGCAGGA CGCGAAAGGTGGAGGCTGGGCCGCCCTTGTGCACCGCAGGA < 41bp 1 0.41534237952688 1 0.290994852781296 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740810 chr1:215740806 . . 0 17 hm5C_associated_SNPs_3401 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 215740806 215740806 1 + C T rs540761081 215740811 + 215740791 215740831 41 GCGAAAGGTGGAGGCCGGGCCGCCCTTGTGCACCGCAGGAT GCGAAAGGTGGAGGCTGGGCCGCCCTTGTGCACCGCAGGAT < 41bp 1 0.782584137347102 1 0.493035018444061 experiment 0.434831725305797 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740811 chr1:215740806 . . 0 16 hm5C_associated_SNPs_3402 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 215740806 215740806 1 + C T rs540761081 215740813 + 215740793 215740833 41 GAAAGGTGGAGGCCGGGCCGCCCTTGTGCACCGCAGGATTG GAAAGGTGGAGGCTGGGCCGCCCTTGTGCACCGCAGGATTG < 41bp 1 0.35893262070462 1 0.0897831320762634 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740813 chr1:215740806 . . 0 14 hm5C_associated_SNPs_3403 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 215740806 215740806 1 + C T rs540761081 215740814 + 215740794 215740834 41 AAAGGTGGAGGCCGGGCCGCCCTTGTGCACCGCAGGATTGA AAAGGTGGAGGCTGGGCCGCCCTTGTGCACCGCAGGATTGA < 41bp 1 0.197792379297022 1 0.096869945526123 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740814 chr1:215740806 . . 0 13 hm5C_associated_SNPs_3404 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 215740806 215740806 1 + C T rs540761081 215740815 + 215740795 215740835 41 AAGGTGGAGGCCGGGCCGCCCTTGTGCACCGCAGGATTGAC AAGGTGGAGGCTGGGCCGCCCTTGTGCACCGCAGGATTGAC < 41bp 1 0.509635852407145 1 0.131353378295898 experiment 0.98072829518571 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740815 chr1:215740806 . . 0 12 hm5C_associated_SNPs_3405 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:215740785-215740828
64251 chr1 215740939 215740939 1 + C T rs562348854 215740919 + 215740899 215740939 41 CACCCCCCGCCCTCCGGCCGCCGCCGCCCCGCTGGCCCTGC CACCCCCCGCCCTCCGGCCGCCGCCGCCCCGCTGGCCCTGT < 41bp 1 0.357407972723295 1 0.582338988780975 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KCTD3 ENSG00000136636 UTR5 Human protein_coding chr1:215740919 chr1:215740939 . . 0 41 hm5C_associated_SNPs_3406 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:215740938-215740966
64251 chr1 220279330 220279330 1 + G A rs143373097 220279315 + 220279295 220279335 41 TTACCTGCAAATCATGTGACCATGGCAAAAGGAACGGGATT TTACCTGCAAATCATGTGACCATGGCAAAAGGAACAGGATT < 41bp 1 0.192793939109741 1 0.423068046569824 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IARS2 ENSG00000067704 CDS Human protein_coding chr1:220279315 chr1:220279330 synonymous SNV . 0 36 hm5C_associated_SNPs_3407 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:220279326-220279346
64251 chr1 220922002 220922002 1 + A G rs72472371 220921996 + 220921976 220922016 41 CTGGGGACTGTCGCCTGGCGCCGCGCATGGCCCAGGCGGCG CTGGGGACTGTCGCCTGGCGCCGCGCGTGGCCCAGGCGGCG < 41bp 1 0.694414233903636 1 0.411056339740753 experiment 0.611171532192729 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220921996 chr1:220922002 synonymous SNV . 0 27 hm5C_associated_SNPs_3408 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:220922001-220922002
64251 chr1 220922002 220922002 1 + A G rs72472371 220922017 + 220921997 220922037 41 CGCGCATGGCCCAGGCGGCGCCGGCGGCTGCAGCAGGTGGG CGCGCGTGGCCCAGGCGGCGCCGGCGGCTGCAGCAGGTGGG < 41bp 1 0.651174101808607 1 0.596660733222961 experiment 0.697651796382785 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220922017 chr1:220922002 synonymous SNV . 0 6 hm5C_associated_SNPs_3409 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:220922001-220922002
64251 chr1 220928376 220928376 1 + T C rs371348 220928383 + 220928363 220928403 41 TCATTTATGAGAATAACTGCCTGATCTTCAGGGCTCCAGAC TCATTTATGAGAACAACTGCCTGATCTTCAGGGCTCCAGAC < 41bp 1 0.454537039889894 1 0.0354971885681152 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928383 chr1:220928376 synonymous SNV . 0 14 hm5C_associated_SNPs_3410 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220928362-220928381
64251 chr1 220928376 220928376 1 + T C rs371348 220928388 + 220928368 220928408 41 TATGAGAATAACTGCCTGATCTTCAGGGCTCCAGACATGGA TATGAGAACAACTGCCTGATCTTCAGGGCTCCAGACATGGA < 41bp 1 0.729015298987148 1 0.198908060789108 experiment 0.541969402025703 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928388 chr1:220928376 synonymous SNV . 0 9 hm5C_associated_SNPs_3411 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220928362-220928381
64251 chr1 220960309 220960309 1 + C T rs556720666 220960329 + 220960309 220960349 41 CGCTGGCGCGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGG TGCTGGCGCGCTTTGTCCTCCTCGCGCAATCCCGGCCCGGG < 41bp 1 0.779043173553845 1 0.282823860645294 experiment 0.441913652892311 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220960329 chr1:220960309 nonsynonymous SNV 0.001 0 1 hm5C_associated_SNPs_3412 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:220960278-220960316
64251 chr1 220964926 220964926 1 + C T rs35887054 220964927 + 220964907 220964947 41 TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTAC TGACCTGCGATGGTGACACTCTGACTCTCAGTGCAGCCTAC < 41bp 1 0.516811550072502 1 0.112009823322296 experiment 0.966376899854996 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964927 chr1:220964926 synonymous SNV . 0 20 hm5C_associated_SNPs_3413 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220964900-220964929
64251 chr1 220964926 220964926 1 + C T rs35887054 220964933 + 220964913 220964953 41 GCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACAAAG GCGATGGTGACACTCTGACTCTCAGTGCAGCCTACACAAAG < 41bp 1 0.708242883170399 1 0.287999451160431 experiment 0.583514233659203 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964933 chr1:220964926 synonymous SNV . 0 14 hm5C_associated_SNPs_3414 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220964900-220964929
64251 chr1 222638350 222638350 1 + T G rs533469480 222638349 + 222638329 222638369 41 AAAACAACGCCTCACGTGGGCTCCATAGCTCAGTGGTTAGA AAAACAACGCCTCACGTGGGCGCCATAGCTCAGTGGTTAGA < 41bp 1 0.500886643658516 1 0.506060063838959 experiment 0.998226712682969 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638349 chr1:222638350 . . 0 22 hm5C_associated_SNPs_3418 0 0 54 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638350 222638350 1 + T G rs533469480 222638351 + 222638331 222638371 41 AACAACGCCTCACGTGGGCTCCATAGCTCAGTGGTTAGAGC AACAACGCCTCACGTGGGCGCCATAGCTCAGTGGTTAGAGC < 41bp 1 0.0840978351020447 1 0.212290674448013 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638351 chr1:222638350 . . 0 20 hm5C_associated_SNPs_3419 0 0 54 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638350 222638350 1 + T G rs533469480 222638352 + 222638332 222638372 41 ACAACGCCTCACGTGGGCTCCATAGCTCAGTGGTTAGAGCA ACAACGCCTCACGTGGGCGCCATAGCTCAGTGGTTAGAGCA < 41bp 1 0.138586086934056 1 0.437036037445068 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638352 chr1:222638350 . . 0 19 hm5C_associated_SNPs_3420 0 0 54 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638350 222638350 1 + T G rs533469480 222638357 + 222638337 222638377 41 GCCTCACGTGGGCTCCATAGCTCAGTGGTTAGAGCACTGGT GCCTCACGTGGGCGCCATAGCTCAGTGGTTAGAGCACTGGT < 41bp 1 0.620780414882521 1 0.457435667514801 experiment 0.758439170234957 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638357 chr1:222638350 . . 0 14 hm5C_associated_SNPs_3421 0 0 54 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638350 222638350 1 + T G rs533469480 222638359 + 222638339 222638379 41 CTCACGTGGGCTCCATAGCTCAGTGGTTAGAGCACTGGTCT CTCACGTGGGCGCCATAGCTCAGTGGTTAGAGCACTGGTCT < 41bp 1 0.635643491073103 1 0.783258080482483 experiment 0.728713017853793 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638359 chr1:222638350 . . 0 12 hm5C_associated_SNPs_3422 0 0 54 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638418 222638418 1 + C T rs189143488 222638402 + 222638382 222638422 41 TAAACCAGGGGTCGCGAGTTCGATCCTCGCTGGGGCCTCCT TAAACCAGGGGTCGCGAGTTCGATCCTCGCTGGGGCTTCCT < 41bp 1 0.169975897310016 1 0.14376974105835 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638402 chr1:222638418 . . 0 37 hm5C_associated_SNPs_3423 0 0 56 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638418 222638418 1 + C T rs189143488 222638407 + 222638387 222638427 41 CAGGGGTCGCGAGTTCGATCCTCGCTGGGGCCTCCTGTTGG CAGGGGTCGCGAGTTCGATCCTCGCTGGGGCTTCCTGTTGG < 41bp 1 0.413163004419977 1 0.692915141582489 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638407 chr1:222638418 . . 0 32 hm5C_associated_SNPs_3424 0 0 56 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638418 222638418 1 + C T rs189143488 222638409 + 222638389 222638429 41 GGGGTCGCGAGTTCGATCCTCGCTGGGGCCTCCTGTTGGCT GGGGTCGCGAGTTCGATCCTCGCTGGGGCTTCCTGTTGGCT < 41bp 1 0.237905479355288 1 0.150993853807449 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638409 chr1:222638418 . . 0 30 hm5C_associated_SNPs_3425 0 0 56 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222638418 222638418 1 + C T rs189143488 222638417 + 222638397 222638437 41 GAGTTCGATCCTCGCTGGGGCCTCCTGTTGGCTTACTTTTA GAGTTCGATCCTCGCTGGGGCTTCCTGTTGGCTTACTTTTA < 41bp 1 0.0248660085891816 1 0.0633037388324738 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01655;HHIPL2 ENSG00000226643;ENSG00000234419 intergenic Human other chr1:222638417 chr1:222638418 . . 0 22 hm5C_associated_SNPs_3426 0 0 56 SSB POSTAR2 GSE95683,GSM2521599 chr1:222638334-222638438
64251 chr1 222833538 222833538 1 + C G rs2291835 222833549 + 222833529 222833569 41 CCAGAATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG CCAGAATGGGTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG < 41bp 1 0.103827430623094 1 0.0965434014797211 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222833549 chr1:222833538 synonymous SNV . 0 10 hm5C_associated_SNPs_3429 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr1:222833532-222833567
64251 chr1 222898824 222898824 1 + G A rs17163847 222898817 + 222898797 222898837 41 TCATCTCCCAAAACTCATTACACCTGCGGAAAAAGGAAGAG TCATCTCCCAAAACTCATTACACCTGCAGAAAAAGGAAGAG < 41bp 1 0.329788678125669 1 0.204894453287125 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BROX ENSG00000162819 CDS Human protein_coding chr1:222898817 chr1:222898824 synonymous SNV . 0 28 hm5C_associated_SNPs_3430 0 0 4 GRWD1 POSTAR2 ENCODE chr1:222898790-222898850
64251 chr1 222906700 222906700 1 + G A rs537095733 222906680 + 222906660 222906700 41 TGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAG TGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAA < 41bp 1 0.201767743077978 1 0.172025710344315 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BROX ENSG00000162819 UTR3 Human protein_coding chr1:222906680 chr1:222906700 . . 0 41 hm5C_associated_SNPs_3431 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:222906698-222906731
64251 chr1 222906700 222906700 1 + G A rs537095733 222906681 + 222906661 222906701 41 GATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGG GATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAAG < 41bp 1 0.211529276010074 1 0.237258672714233 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BROX ENSG00000162819 UTR3 Human protein_coding chr1:222906681 chr1:222906700 . . 0 40 hm5C_associated_SNPs_3432 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:222906698-222906731
64251 chr1 222906700 222906700 1 + G A rs537095733 222906682 + 222906662 222906702 41 ATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGC ATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAAGC < 41bp 1 0.373299554154244 1 0.383284270763397 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BROX ENSG00000162819 UTR3 Human protein_coding chr1:222906682 chr1:222906700 . . 0 39 hm5C_associated_SNPs_3433 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:222906698-222906731
64251 chr1 223900486 223900486 1 + C T rs28370008 223900495 + 223900475 223900515 41 CTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCT CTCTTCCAGGATCCGTCCTTCCCGGCCATCCCCTCGGCCCT < 41bp 1 0.5100061040879 1 0.174251556396484 experiment 0.979987791824199 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223900495 chr1:223900486 synonymous SNV . 0 12 hm5C_associated_SNPs_3434 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr1:223900481-223900514
64251 chr1 223900511 223900511 1 + G A rs146572729 223900495 + 223900475 223900515 41 CTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCT CTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGACCCT < 41bp 1 0.516335528571734 1 0.139478385448456 experiment 0.967328942856532 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223900495 chr1:223900511 nonsynonymous SNV 0.077 1 37 hm5C_associated_SNPs_3435 0 0 6 FBL POSTAR2 GSE43666,GSM1067865 chr1:223900481-223900514
64251 chr1 223934720 223934720 1 + G A rs17600 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATCAACGGATGCTATGAAGCACTATCAGGGGGTGCCACCA < 41bp 1 0.716956762581622 1 0.298216879367828 experiment 0.566086474836755 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934720 synonymous SNV . 0 22 hm5C_associated_SNPs_3436 0 0 3 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934720 223934720 1 + G A rs17600 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TCAACGGATGCTATGAAGCACTATCAGGGGGTGCCACCACT < 41bp 1 0.0766832183815273 1 0.0456267297267914 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934720 synonymous SNV . 0 20 hm5C_associated_SNPs_3437 0 0 3 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223946089 223946089 1 + G T rs28370108 223946102 + 223946082 223946122 41 ACATCGGGCTCTTTTAGATGCTGCTCCAGCCTTGGTCCGGT ACATCGGTCTCTTTTAGATGCTGCTCCAGCCTTGGTCCGGT < 41bp 1 0.241325765008631 1 0.291108667850494 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAPN2 ENSG00000162909 intronic Human protein_coding chr1:223946102 chr1:223946089 . . 0 8 hm5C_associated_SNPs_3438 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:223946007-223946091
64251 chr1 224380478 224380478 1 + A G rs1060386 224380477 + 224380457 224380497 41 CTTCTAAAAAGCTATTTCGCCAGGCACGGTGGCTCATGCCT CTTCTAAAAAGCTATTTCGCCGGGCACGGTGGCTCATGCCT < 41bp 1 0.719329002988871 1 0.662127494812012 experiment 0.561341994022258 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEGS1 ENSG00000143753 UTR3 Human protein_coding chr1:224380477 chr1:224380478 . . 0 22 hm5C_associated_SNPs_3439 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:224380380-224380480
64251 chr1 224553693 224553693 1 + G A rs183720647 224553676 + 224553656 224553696 41 CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGGTG CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCAGTG < 41bp 1 0.290113406082832 1 0.42575141787529 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNIH4 ENSG00000143771 CDS Human protein_coding chr1:224553676 chr1:224553693 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_3440 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:224553645-224553693
64251 chr1 225977945 225977945 1 + T C rs191367978 225977934 + 225977914 225977954 41 AAGGTGTTAGGTGTGACTGTCACAACTGTTATGTTTTCCAG AAGGTGTTAGGTGTGACTGTCACAACTGTTACGTTTTCCAG < 41bp 1 0.741111756582722 1 0.705687761306763 experiment 0.517776486834556 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRP9 ENSG00000143742 UTR3 Human protein_coding chr1:225977934 chr1:225977945 . . 0 32 hm5C_associated_SNPs_3442 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:225977870-225977954
64251 chr1 227171802 227171802 1 + C T rs200375779 227171811 + 227171791 227171831 41 CCAGGGACCTGCTGAAGGGCCACCCCTTCTTCTATGTGCCT CCAGGGACCTGTTGAAGGGCCACCCCTTCTTCTATGTGCCT < 41bp 1 0.17055400089939 1 0.0789862275123596 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171811 chr1:227171802 synonymous SNV . 0 12 hm5C_associated_SNPs_3443 0 0 9 DDX24 POSTAR2 ENCODE chr1:227171748-227171867
64251 chr1 227751266 227751266 1 + G C rs117098396 227751281 + 227751261 227751301 41 GTCTTGTGCTCCAGCTGGAGCTTTGGTCCCGTATTCTCGGC GTCTTCTGCTCCAGCTGGAGCTTTGGTCCCGTATTCTCGGC < 41bp 1 0.313252783945 1 0.0651430487632751 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF678 ENSG00000181450 UTR5 Human protein_coding chr1:227751281 chr1:227751266 . . 0 6 hm5C_associated_SNPs_3444 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:227751260-227751280
64251 chr1 227968671 227968671 1 + G A rs146464689 227968654 + 227968634 227968674 41 GACCCCAAGGACACTTGGCACAGGCCTGGAAGAGGCCGCCC GACCCCAAGGACACTTGGCACAGGCCTGGAAGAGGCCACCC < 41bp 1 0.677932395534343 1 0.385085582733154 experiment 0.644135208931315 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNAP47 ENSG00000143740 UTR3 Human protein_coding chr1:227968654 chr1:227968671 . . 0 38 hm5C_associated_SNPs_3445 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:227968640-227968679
64251 chr1 227968673 227968673 1 + C T rs568444232 227968654 + 227968634 227968674 41 GACCCCAAGGACACTTGGCACAGGCCTGGAAGAGGCCGCCC GACCCCAAGGACACTTGGCACAGGCCTGGAAGAGGCCGCTC < 41bp 1 0.691682162909749 1 0.229640334844589 experiment 0.616635674180502 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNAP47 ENSG00000143740 UTR3 Human protein_coding chr1:227968654 chr1:227968673 . . 0 40 hm5C_associated_SNPs_3446 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:227968640-227968679
64251 chr1 228286085 228286085 1 + T C rs189047528 228286105 + 228286085 228286125 41 TTTTGGTGGTTGGTTTTTAACCCAAACTCAGTGCATTTTTT CTTTGGTGGTTGGTTTTTAACCCAAACTCAGTGCATTTTTT < 41bp 1 0.403950133650199 1 0.242993474006653 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286105 chr1:228286085 . . 0 1 hm5C_associated_SNPs_3447 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:228285587-228286596
64251 chr1 228286582 228286582 1 + G A rs531523370 228286579 + 228286559 228286599 41 CAGCAGGAGCGCGTGCAAGCCGGGCAGGCGGTCCACCTAGA CAGCAGGAGCGCGTGCAAGCCGGACAGGCGGTCCACCTAGA < 41bp 1 0.726164883679557 1 0.704516530036926 experiment 0.547670232640885 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286579 chr1:228286582 . . 0 24 hm5C_associated_SNPs_3448 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:228285587-228286596
64251 chr1 228286628 228286628 1 + C G rs187703170 228286618 + 228286598 228286638 41 GACCCACAGCCCCTCGGGAGCACCCCACCTCTGTGTGTGAT GACCCACAGCCCCTCGGGAGCACCCCACCTGTGTGTGTGAT < 41bp 1 0.311708779186932 1 0.439624518156052 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286618 chr1:228286628 . . 0 31 hm5C_associated_SNPs_3449 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:228286607-228286636
64251 chr1 228286881 228286881 1 + T C rs149161835 228286870 + 228286850 228286890 41 TTTTCATTTCGACAAACAAGCACTGTAATTATAGCTATTAG TTTTCATTTCGACAAACAAGCACTGTAATTACAGCTATTAG < 41bp 1 0.30007711837324 1 0.112322390079498 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARF1 ENSG00000143761 UTR3 Human protein_coding chr1:228286870 chr1:228286881 . . 0 32 hm5C_associated_SNPs_3450 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:228286575-228286908
64251 chr1 228333240 228333240 1 + G A rs141117528 228333243 + 228333223 228333263 41 CCCAGGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAA CCCAGGCCTGTGGTGCTAAGCGGGCCTTCGGGAGCTGGGAA < 41bp 1 0.785675718488627 1 0.897470116615295 experiment 0.428648563022747 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333243 chr1:228333240 nonsynonymous SNV 0.713 0 18 hm5C_associated_SNPs_3451 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228333200-228333240
64251 chr1 228333240 228333240 1 + G A rs141117528 228333247 + 228333227 228333267 41 GGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAAGAGC GGCCTGTGGTGCTAAGCGGGCCTTCGGGAGCTGGGAAGAGC < 41bp 1 0.0342605773977053 1 0.0995963513851166 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333247 chr1:228333240 nonsynonymous SNV 0.713 0 14 hm5C_associated_SNPs_3452 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228333200-228333240
64251 chr1 228333701 228333701 1 + C A rs199710311 228333718 + 228333698 228333738 41 CCCCGATGGGTGACAGGTCTCTCTGCTAGATACCACGAGGA CCCAGATGGGTGACAGGTCTCTCTGCTAGATACCACGAGGA < 41bp 1 0.595431577216636 1 0.123850166797638 experiment 0.809136845566728 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GUK1 ENSG00000143774 intronic Human protein_coding chr1:228333718 chr1:228333701 . . 0 4 hm5C_associated_SNPs_3453 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr1:228333684-228333722
64251 chr1 228459670 228459670 1 + G C rs115028988 228459666 + 228459646 228459686 41 AAGGAGCAGGTGGTGTTTGCCAAGGATCAGCCGGTGCACAG AAGGAGCAGGTGGTGTTTGCCAAGCATCAGCCGGTGCACAG < 41bp 1 0.143430804400969 1 0.77953714132309 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228459666 chr1:228459670 nonsynonymous SNV 0.020 0 25 hm5C_associated_SNPs_3455 0 0 1 DDX24 POSTAR2 ENCODE chr1:228459625-228459746
64251 chr1 228459677 228459677 1 + C T rs117651701 228459666 + 228459646 228459686 41 AAGGAGCAGGTGGTGTTTGCCAAGGATCAGCCGGTGCACAG AAGGAGCAGGTGGTGTTTGCCAAGGATCAGCTGGTGCACAG < 41bp 1 0.264942228231389 1 0.883443713188171 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228459666 chr1:228459677 nonsynonymous SNV 0.002 0 32 hm5C_associated_SNPs_3456 0 0 1 DDX24 POSTAR2 ENCODE chr1:228459625-228459746
64251 chr1 228881762 228881762 1 + G A rs114875384 228881764 + 228881744 228881784 41 GTGAAGTACACCTGTGTGGCCCAGTTCTGAAAGCTTTATAC GTGAAGTACACCTGTGTGACCCAGTTCTGAAAGCTTTATAC < 41bp 1 0.367651546181124 1 0.180224925279617 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RHOU ENSG00000116574 UTR3 Human protein_coding chr1:228881764 chr1:228881762 . . 0 19 hm5C_associated_SNPs_3472 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:228881723-228881780
64251 chr1 229439639 229439639 1 + T A rs15452 229439650 + 229439630 229439670 41 TACTCTGTATGGAAGTAGATCTTTATGGGGAAAAGAGAATT TACTCTGTAAGGAAGTAGATCTTTATGGGGAAAAGAGAATT < 41bp 1 0.287372397765876 1 0.177530407905579 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB4A ENSG00000168118 UTR3 Human protein_coding chr1:229439650 chr1:229439639 . . 0 10 hm5C_associated_SNPs_3473 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:229439568-229439720
64251 chr1 230384970 230384970 1 + G A rs1923950 230384969 + 230384949 230384989 41 ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCC ATTCAAGTGGGATTACATGACACCTGAGCAGAGAAGGTCCC < 41bp 1 0.468745887120695 1 0.207816541194916 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384969 chr1:230384970 synonymous SNV . 0 22 hm5C_associated_SNPs_3474 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chr1 230384970 230384970 1 + G A rs1923950 230384971 + 230384951 230384991 41 TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCCGG TCAAGTGGGATTACATGACACCTGAGCAGAGAAGGTCCCGG < 41bp 1 0.317546378059145 1 0.0672382414340973 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384971 chr1:230384970 synonymous SNV . 0 20 hm5C_associated_SNPs_3475 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chr1 230415579 230415579 1 + G T rs535163452 230415580 + 230415560 230415600 41 GACAGGGCGGGAGGAGGGGGCACACATGCCCCAGGGGAGCG GACAGGGCGGGAGGAGGGGTCACACATGCCCCAGGGGAGCG < 41bp 1 0.363888216390379 1 0.340076386928558 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415580 chr1:230415579 . . 0 20 hm5C_associated_SNPs_3476 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:230415523-230415612
64251 chr1 230415593 230415593 1 + G A rs15273 230415580 + 230415560 230415600 41 GACAGGGCGGGAGGAGGGGGCACACATGCCCCAGGGGAGCG GACAGGGCGGGAGGAGGGGGCACACATGCCCCAAGGGAGCG < 41bp 1 0.289058055551086 1 0.336239904165268 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415580 chr1:230415593 . . 0 34 hm5C_associated_SNPs_3477 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:230415523-230415612
64251 chr1 231135910 231135910 1 + A G rs189216908 231135914 + 231135894 231135934 41 CTTCACTATCTGTGGCATGACCAGCTGTATCTGAAAGAGAA CTTCACTATCTGTGGCGTGACCAGCTGTATCTGAAAGAGAA < 41bp 1 0.281213372105089 1 0.241216123104095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARV1 ENSG00000173409 UTR3 Human protein_coding chr1:231135914 chr1:231135910 . . 0 17 hm5C_associated_SNPs_3478 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:231135853-231135912
64251 chr1 231135910 231135910 1 + A G rs189216908 231135915 + 231135895 231135935 41 TTCACTATCTGTGGCATGACCAGCTGTATCTGAAAGAGAAA TTCACTATCTGTGGCGTGACCAGCTGTATCTGAAAGAGAAA < 41bp 1 0.698156919574292 1 0.459951639175415 experiment 0.603686160851415 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARV1 ENSG00000173409 UTR3 Human protein_coding chr1:231135915 chr1:231135910 . . 0 16 hm5C_associated_SNPs_3479 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:231135853-231135912
64251 chr1 231376972 231376972 1 + A C rs537119013 231376979 + 231376959 231376999 41 CGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCG CGTCCTGGCTGAGCTGGCGGCGCCCGGGATCCTGTGTAGCG < 41bp 1 0.68168757093097 1 0.367930114269257 experiment 0.636624858138061 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376979 chr1:231376972 . . 0 14 hm5C_associated_SNPs_3480 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:231376960-231376980
64251 chr1 231376972 231376972 1 + A C rs537119013 231376981 + 231376961 231377001 41 TCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGC TCCTGGCTGAGCTGGCGGCGCCCGGGATCCTGTGTAGCGGC < 41bp 1 0.789622880854709 1 0.56623637676239 experiment 0.420754238290581 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376981 chr1:231376972 . . 0 12 hm5C_associated_SNPs_3481 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:231376960-231376980
64251 chr1 231376980 231376980 1 + G A rs113752547 231376979 + 231376959 231376999 41 CGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCG CGTCCTGGCTGAGATGGCGGCACCCGGGATCCTGTGTAGCG < 41bp 1 0.5909077331989 1 0.187961131334305 experiment 0.8181845336022 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376979 chr1:231376980 . . 0 22 hm5C_associated_SNPs_3482 1 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:231376960-231376980
64251 chr1 231376980 231376980 1 + G A rs113752547 231376981 + 231376961 231377001 41 TCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGC TCCTGGCTGAGATGGCGGCACCCGGGATCCTGTGTAGCGGC < 41bp 1 0.769273684866355 1 0.481058955192566 experiment 0.461452630267291 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376981 chr1:231376980 . . 0 20 hm5C_associated_SNPs_3483 1 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:231376960-231376980
64251 chr1 231376989 231376989 1 + C T rs546114860 231376979 + 231376959 231376999 41 CGTCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCG CGTCCTGGCTGAGATGGCGGCGCCCGGGATTCTGTGTAGCG < 41bp 1 0.59305921720201 1 0.262959897518158 experiment 0.81388156559598 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376979 chr1:231376989 . . 0 31 hm5C_associated_SNPs_3484 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:231376960-231377000
64251 chr1 231376989 231376989 1 + C T rs546114860 231376981 + 231376961 231377001 41 TCCTGGCTGAGATGGCGGCGCCCGGGATCCTGTGTAGCGGC TCCTGGCTGAGATGGCGGCGCCCGGGATTCTGTGTAGCGGC < 41bp 1 0.746830890269797 1 0.579804956912994 experiment 0.506338219460406 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231376981 chr1:231376989 . . 0 29 hm5C_associated_SNPs_3485 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:231376960-231377000
64251 chr1 231377004 231377004 1 + C A rs573141457 231377013 + 231376993 231377033 41 TGTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAG TGTAGCGGCTGAAGAGGGTGCCGCCGCCCTAGGCGAAGTAG < 41bp 1 0.42509671522741 1 0.281031847000122 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231377013 chr1:231377004 . . 0 12 hm5C_associated_SNPs_3486 0 0 4 DDX3X POSTAR2 ENCODE chr1:231376979-231377083
64251 chr1 231377004 231377004 1 + C A rs573141457 231377014 + 231376994 231377034 41 GTAGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGG GTAGCGGCTGAAGAGGGTGCCGCCGCCCTAGGCGAAGTAGG < 41bp 1 0.681614155053096 1 0.680119633674622 experiment 0.636771689893808 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231377014 chr1:231377004 . . 0 11 hm5C_associated_SNPs_3487 0 0 4 DDX3X POSTAR2 ENCODE chr1:231376979-231377083
64251 chr1 231377004 231377004 1 + C A rs573141457 231377016 + 231376996 231377036 41 AGCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGC AGCGGCTGAAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGC < 41bp 1 0.339629547427872 1 0.433719575405121 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231377016 chr1:231377004 . . 0 9 hm5C_associated_SNPs_3488 0 0 4 DDX3X POSTAR2 ENCODE chr1:231376979-231377083
64251 chr1 231377004 231377004 1 + C A rs573141457 231377017 + 231376997 231377037 41 GCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCC GCGGCTGAAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCC < 41bp 1 0.699048625286052 1 0.710739612579346 experiment 0.601902749427897 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231377017 chr1:231377004 . . 0 8 hm5C_associated_SNPs_3489 0 0 4 DDX3X POSTAR2 ENCODE chr1:231376979-231377083
64251 chr1 231377037 231377037 1 + C A rs529367950 231377017 + 231376997 231377037 41 GCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCC GCGGCTGCAGAGGGTGCCGCCGCCCTAGGCGAAGTAGGGCA < 41bp 1 0.672353997699311 1 0.649278223514557 experiment 0.655292004601378 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GNPAT ENSG00000116906 UTR5 Human protein_coding chr1:231377017 chr1:231377037 . . 0 41 hm5C_associated_SNPs_3490 0 0 2 DDX3X POSTAR2 ENCODE chr1:231376979-231377083
64251 chr1 231413306 231413306 1 + T C rs150776112 231413315 + 231413295 231413335 41 ACAAATAGTTATGGAAAATTCGGTCACGTAATTACTCTCAT ACAAATAGTTACGGAAAATTCGGTCACGTAATTACTCTCAT < 41bp 1 0.598923210645109 1 0.438599139451981 experiment 0.802153578709783 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNPAT ENSG00000116906 UTR3 Human protein_coding chr1:231413315 chr1:231413306 . . 0 12 hm5C_associated_SNPs_3491 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:231413295-231413357
64251 chr1 233489682 233489682 1 + G A rs56268427 233489675 + 233489655 233489695 41 GCCCATTCCATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA GCCCATTCCATCCACCTGCCCTGAGCCATTTGCCAAGCTCA < 41bp 1 0.314341619253029 1 0.090310275554657 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233489675 chr1:233489682 synonymous SNV . 0 28 hm5C_associated_SNPs_3492 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233489660-233489688
64251 chr1 233514934 233514934 1 + G A rs3795375 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCATCCTTCTGGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.272390254135124 1 0.0485510528087616 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514934 nonsynonymous SNV 0.000 0 11 hm5C_associated_SNPs_3493 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr1 235491903 235491903 1 + C T rs72758083 235491901 + 235491881 235491921 41 GCGCAGTGTGACCGGGATGGCGCATTTTCTTGCACCAACTA GCGCAGTGTGACCGGGATGGCGTATTTTCTTGCACCAACTA < 41bp 1 0.366738908940697 1 0.310750842094421 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GGPS1 ENSG00000152904 UTR5 Human protein_coding chr1:235491901 chr1:235491903 . . 0 23 hm5C_associated_SNPs_3494 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:235491890-235491924
64251 chr1 235577753 235577753 1 + C G rs147489278 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCGGACAGGAGGATCCTTTATTCGTCCGAACAAGG < 41bp 1 0.0170115824520609 1 0.0330307185649872 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577753 nonsynonymous SNV 0.989 4 9 hm5C_associated_SNPs_3495 0 0 3 U2AF2 POSTAR2 ENCODE chr1:235577735-235577777
64251 chr1 235577756 235577756 1 + C A rs144747353 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCCGAAAGGAGGATCCTTTATTCGTCCGAACAAGG < 41bp 1 0.0114852832601086 1 0.0323952436447144 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577756 nonsynonymous SNV 0.994 1 12 hm5C_associated_SNPs_3496 1 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:235577754-235577779
64251 chr1 235577776 235577776 1 + C T rs62620041 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCCGACAGGAGGATCCTTTATTCGTTCGAACAAGG < 41bp 1 0.0156332955647719 1 0.0361113548278809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577776 nonsynonymous SNV 0.666 4 32 hm5C_associated_SNPs_3497 2 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:235577754-235577779
64251 chr1 235600723 235600723 1 + A G rs35663526 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AGGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC < 41bp 1 0.610616063784473 1 0.0738880336284637 experiment 0.778767872431053 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600723 synonymous SNV . 0 2 hm5C_associated_SNPs_3498 1 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr1 235600741 235600741 1 + A G rs6666168 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTGCTCATTATCGCCAGCATTGGC < 41bp 1 0.534354715972389 1 0.0630007386207581 experiment 0.931290568055222 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600741 synonymous SNV . 0 20 hm5C_associated_SNPs_3499 1 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr1 237062294 237062294 1 + A G rs114316012 237062306 + 237062286 237062326 41 CAATAGTCAGGAGAAGGTAACATTGGAGTCCTGGTTTGATT CAATAGTCGGGAGAAGGTAACATTGGAGTCCTGGTTTGATT < 41bp 1 0.155124817534808 1 0.190806120634079 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 UTR3 Human protein_coding chr1:237062306 chr1:237062294 . . 0 9 hm5C_associated_SNPs_3505 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:237062273-237062301
64251 chr1 237062305 237062305 1 + A G rs1050993 237062306 + 237062286 237062326 41 CAATAGTCAGGAGAAGGTAACATTGGAGTCCTGGTTTGATT CAATAGTCAGGAGAAGGTAGCATTGGAGTCCTGGTTTGATT < 41bp 1 0.122036776663452 1 0.119083851575851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 UTR3 Human protein_coding chr1:237062306 chr1:237062305 . . 0 20 hm5C_associated_SNPs_3506 1 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:237062294-237062315
64251 chr1 237062413 237062413 1 + T C rs3768159 237062419 + 237062399 237062439 41 AGATTATAAAGGTATCAGGTCTCCTAAAATTGATCTATGGA AGATTATAAAGGTACCAGGTCTCCTAAAATTGATCTATGGA < 41bp 1 0.0588362326307847 1 0.340748965740204 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTR ENSG00000116984 UTR3 Human protein_coding chr1:237062419 chr1:237062413 . . 0 15 hm5C_associated_SNPs_3507 1 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:237062400-237062420
64251 chr1 237062432 237062432 1 + T C rs3768160 237062419 + 237062399 237062439 41 AGATTATAAAGGTATCAGGTCTCCTAAAATTGATCTATGGA AGATTATAAAGGTATCAGGTCTCCTAAAATTGACCTATGGA < 41bp 1 0.0576539780810871 1 0.363204151391983 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTR ENSG00000116984 UTR3 Human protein_coding chr1:237062419 chr1:237062432 . . 0 34 hm5C_associated_SNPs_3508 1 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:237062409-237062447
64251 chr1 242011534 242011534 1 + A G rs1776178 242011535 + 242011515 242011555 41 CGCGCTGTGTAGGCAAGTTACCCGTGTTCTGCGTTGCCGGC CGCGCTGTGTAGGCAAGTTGCCCGTGTTCTGCGTTGCCGGC < 41bp 1 0.611954896224703 1 0.0573932528495789 experiment 0.776090207550594 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 UTR5 Human protein_coding chr1:242011535 chr1:242011534 . . 0 20 hm5C_associated_SNPs_3509 0 0 4 DDX3X POSTAR2 ENCODE chr1:242011508-242011655
64251 chr1 242011534 242011534 1 + A G rs1776178 242011536 + 242011516 242011556 41 GCGCTGTGTAGGCAAGTTACCCGTGTTCTGCGTTGCCGGCC GCGCTGTGTAGGCAAGTTGCCCGTGTTCTGCGTTGCCGGCC < 41bp 1 0.615713079928361 1 0.472620844841003 experiment 0.768573840143279 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 UTR5 Human protein_coding chr1:242011536 chr1:242011534 . . 0 19 hm5C_associated_SNPs_3510 0 0 4 DDX3X POSTAR2 ENCODE chr1:242011508-242011655
64251 chr1 242012033 242012033 1 + G A rs1635517 242012034 + 242012014 242012054 41 TTCCCATAATATTTTGCAGGCCTAAGGAAACGTGTCGTCTG TTCCCATAATATTTTGCAGACCTAAGGAAACGTGTCGTCTG < 41bp 1 0.205952312124829 1 0.0850228667259216 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 UTR5 Human protein_coding chr1:242012034 chr1:242012033 . . 0 20 hm5C_associated_SNPs_3511 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:242012032-242012033
64251 chr1 242030151 242030151 1 + A G rs735943 242030150 + 242030130 242030170 41 AGCCTGCCCATTCAAGAAGTCATAGTTGGGATGACAAAACA AGCCTGCCCATTCAAGAAGTCGTAGTTGGGATGACAAAACA < 41bp 1 0.300022302700431 1 0.254491329193115 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242030150 chr1:242030151 nonsynonymous SNV 0.933 0 22 hm5C_associated_SNPs_3512 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:242030140-242030160
64251 chr1 242042437 242042437 1 + G A rs4149978 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTCCAAAGAAAGAGCGATTCCCCCACCTCTTTGCC < 41bp 1 0.162916114993874 1 0.143148809671402 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042437 nonsynonymous SNV 0.179 0 11 hm5C_associated_SNPs_3513 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:242042419-242042458
64251 chr1 242042454 242042454 1 + C G rs61736331 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTCCGAAGAAAGAGCGATTCCGCCACCTCTTTGCC < 41bp 1 0.189993886831812 1 0.0885502994060516 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042454 nonsynonymous SNV 0.003 0 28 hm5C_associated_SNPs_3514 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:242042419-242042458
64251 chr1 244217415 244217415 1 + C T rs151264221 244217405 + 244217385 244217425 41 TGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTATG TGAAGACGTGCTAGCAGCTGCCAGTTATCTTCACATGTATG < 41bp 1 0.144643494639971 1 0.0995930731296539 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217405 chr1:244217415 synonymous SNV . 0 31 hm5C_associated_SNPs_3515 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:244217392-244217418
64251 chr1 244870871 244870871 1 + G T rs79307321 244870862 + 244870842 244870882 41 GCAAAACACTAAGGCTCTAGCAGTGACTTGTTCACTAAAAA GCAAAACACTAAGGCTCTAGCAGTGACTTTTTCACTAAAAA < 41bp 1 0.649728772254346 1 0.303560018539429 experiment 0.700542455491307 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DESI2 ENSG00000121644 UTR3 Human protein_coding chr1:244870862 chr1:244870871 . . 0 30 hm5C_associated_SNPs_3516 0 0 11 MOV10 POSTAR2 GSE37524,GSM921128 chr1:244870765-244870883
64251 chr1 246930889 246930889 1 + G A rs114390989 246930875 + 246930855 246930895 41 GATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGG GATTTTCACGAATGAGCTGGCAGGTCTAATGGGGAAGGCGG < 41bp 1 0.781851629388101 1 0.590612411499023 experiment 0.436296741223798 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SCCPDH ENSG00000143653 UTR3 Human protein_coding chr1:246930875 chr1:246930889 . . 0 35 hm5C_associated_SNPs_3517 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:246930828-246930907
64251 chr1 249168096 249168096 1 + G A rs28582293 249168081 + 249168061 249168101 41 TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGGTAAGCACCT TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGGTAAACACCT < 41bp 1 0.528620389021923 1 0.429389744997025 experiment 0.942759221956154 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168081 chr1:249168096 . . 0 36 hm5C_associated_SNPs_3519 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168082 + 249168062 249168102 41 GGCCGAGTGGTCTAAGGCGCCAGACTCAAGGTAAGCACCTT GGCCGAGTGGTCTAAGGCGCCAGACTCAAGGTAAACACCTT < 41bp 1 0.355128901156807 1 0.649226129055023 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168082 chr1:249168096 . . 0 35 hm5C_associated_SNPs_3520 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168086 + 249168066 249168106 41 GAGTGGTCTAAGGCGCCAGACTCAAGGTAAGCACCTTGCCT GAGTGGTCTAAGGCGCCAGACTCAAGGTAAACACCTTGCCT < 41bp 1 0.710784031978558 1 0.5411416888237 experiment 0.578431936042883 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168086 chr1:249168096 . . 0 31 hm5C_associated_SNPs_3521 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168097 + 249168077 249168117 41 GGCGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCT GGCGCCAGACTCAAGGTAAACACCTTGCCTGCGGGCTTTCT < 41bp 1 0.454429757740467 1 0.260200917720795 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168097 chr1:249168096 . . 0 20 hm5C_associated_SNPs_3522 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168099 + 249168079 249168119 41 CGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGG CGCCAGACTCAAGGTAAACACCTTGCCTGCGGGCTTTCTGG < 41bp 1 0.119184047358719 1 0.15195620059967 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168099 chr1:249168096 . . 0 18 hm5C_associated_SNPs_3523 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168100 + 249168080 249168120 41 GCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGT GCCAGACTCAAGGTAAACACCTTGCCTGCGGGCTTTCTGGT < 41bp 1 0.289831034423397 1 0.161813586950302 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168100 chr1:249168096 . . 0 17 hm5C_associated_SNPs_3524 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168104 + 249168084 249168124 41 GACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCC GACTCAAGGTAAACACCTTGCCTGCGGGCTTTCTGGTCTCC < 41bp 1 0.16116947073088 1 0.0591495633125305 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168104 chr1:249168096 . . 0 13 hm5C_associated_SNPs_3525 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168105 + 249168085 249168125 41 ACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCG ACTCAAGGTAAACACCTTGCCTGCGGGCTTTCTGGTCTCCG < 41bp 1 0.742357401801391 1 0.425487875938416 experiment 0.515285196397219 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168105 chr1:249168096 . . 0 12 hm5C_associated_SNPs_3526 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168108 + 249168088 249168128 41 CAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGAT CAAGGTAAACACCTTGCCTGCGGGCTTTCTGGTCTCCGGAT < 41bp 1 0.701268036667701 1 0.526667654514313 experiment 0.597463926664598 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168108 chr1:249168096 . . 0 9 hm5C_associated_SNPs_3527 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168112 + 249168092 249168132 41 GTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAG GTAAACACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAG < 41bp 1 0.0404679363622074 1 0.0453341007232666 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168112 chr1:249168096 . . 0 5 hm5C_associated_SNPs_3528 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168096 249168096 1 + G A rs28582293 249168116 + 249168096 249168136 41 GCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGT ACACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGT < 41bp 1 0.788975557593524 1 0.474235862493515 experiment 0.422048884812951 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168116 chr1:249168096 . . 0 1 hm5C_associated_SNPs_3529 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:249168040-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168086 + 249168066 249168106 41 GAGTGGTCTAAGGCGCCAGACTCAAGGTAAGCACCTTGCCT GAGTGGTCTAAGGCGCCAGACTCAAGGTAAGCACCTTGCAT < 41bp 1 0.68959245433542 1 0.463831305503845 experiment 0.620815091329159 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168086 chr1:249168105 . . 0 40 hm5C_associated_SNPs_3530 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168097 + 249168077 249168117 41 GGCGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCT GGCGCCAGACTCAAGGTAAGCACCTTGCATGCGGGCTTTCT < 41bp 1 0.429674096868313 1 0.221115440130234 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168097 chr1:249168105 . . 0 29 hm5C_associated_SNPs_3531 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168099 + 249168079 249168119 41 CGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGG CGCCAGACTCAAGGTAAGCACCTTGCATGCGGGCTTTCTGG < 41bp 1 0.0963386443488578 1 0.149402767419815 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168099 chr1:249168105 . . 0 27 hm5C_associated_SNPs_3532 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168100 + 249168080 249168120 41 GCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGT GCCAGACTCAAGGTAAGCACCTTGCATGCGGGCTTTCTGGT < 41bp 1 0.269608913554369 1 0.253961563110352 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168100 chr1:249168105 . . 0 26 hm5C_associated_SNPs_3533 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168104 + 249168084 249168124 41 GACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCC GACTCAAGGTAAGCACCTTGCATGCGGGCTTTCTGGTCTCC < 41bp 1 0.454021051479754 1 0.103540420532227 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168104 chr1:249168105 . . 0 22 hm5C_associated_SNPs_3534 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168112 + 249168092 249168132 41 GTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAG GTAAGCACCTTGCATGCGGGCTTTCTGGTCTCCGGATGGAG < 41bp 1 0.0378192547417482 1 0.0302203297615051 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168112 chr1:249168105 . . 0 14 hm5C_associated_SNPs_3535 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168116 + 249168096 249168136 41 GCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGT GCACCTTGCATGCGGGCTTTCTGGTCTCCGGATGGAGGCGT < 41bp 1 0.780204197080599 1 0.373001396656036 experiment 0.439591605838803 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168116 chr1:249168105 . . 0 10 hm5C_associated_SNPs_3536 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168121 + 249168101 249168141 41 TTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT TTGCATGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT < 41bp 1 0.670588426015504 1 0.466534972190857 experiment 0.658823147968993 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168121 chr1:249168105 . . 0 5 hm5C_associated_SNPs_3537 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168105 249168105 1 + C A rs191209788 249168124 + 249168104 249168144 41 CCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA CATGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA < 41bp 1 0.561431624663492 1 0.825841188430786 experiment 0.877136750673015 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168124 chr1:249168105 . . 0 2 hm5C_associated_SNPs_3538 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168097 + 249168077 249168117 41 GGCGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCT GGCGCCAGACTCAAGGTAAGCACCTTGCCTCCGGGCTTTCT < 41bp 1 0.455945516235945 1 0.219650596380234 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168097 chr1:249168107 . . 0 31 hm5C_associated_SNPs_3539 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168099 + 249168079 249168119 41 CGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGG CGCCAGACTCAAGGTAAGCACCTTGCCTCCGGGCTTTCTGG < 41bp 1 0.077156262912812 1 0.0898120105266571 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168099 chr1:249168107 . . 0 29 hm5C_associated_SNPs_3540 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168100 + 249168080 249168120 41 GCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGT GCCAGACTCAAGGTAAGCACCTTGCCTCCGGGCTTTCTGGT < 41bp 1 0.23069634061661 1 0.255203902721405 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168100 chr1:249168107 . . 0 28 hm5C_associated_SNPs_3541 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168104 + 249168084 249168124 41 GACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCC GACTCAAGGTAAGCACCTTGCCTCCGGGCTTTCTGGTCTCC < 41bp 1 0.104200540957728 1 0.0676821768283844 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168104 chr1:249168107 . . 0 24 hm5C_associated_SNPs_3542 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168105 + 249168085 249168125 41 ACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCG ACTCAAGGTAAGCACCTTGCCTCCGGGCTTTCTGGTCTCCG < 41bp 1 0.720165687929449 1 0.461159259080887 experiment 0.559668624141101 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168105 chr1:249168107 . . 0 23 hm5C_associated_SNPs_3543 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168108 + 249168088 249168128 41 CAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGAT CAAGGTAAGCACCTTGCCTCCGGGCTTTCTGGTCTCCGGAT < 41bp 1 0.759156454930899 1 0.605672240257263 experiment 0.481687090138201 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168108 chr1:249168107 . . 0 20 hm5C_associated_SNPs_3544 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168112 + 249168092 249168132 41 GTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAG GTAAGCACCTTGCCTCCGGGCTTTCTGGTCTCCGGATGGAG < 41bp 1 0.0365522562378394 1 0.0378593504428864 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168112 chr1:249168107 . . 0 16 hm5C_associated_SNPs_3545 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168116 + 249168096 249168136 41 GCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGT GCACCTTGCCTCCGGGCTTTCTGGTCTCCGGATGGAGGCGT < 41bp 1 0.782112369793257 1 0.395443916320801 experiment 0.435775260413487 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168116 chr1:249168107 . . 0 12 hm5C_associated_SNPs_3546 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168121 + 249168101 249168141 41 TTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT TTGCCTCCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT < 41bp 1 0.632677272403689 1 0.530763268470764 experiment 0.734645455192622 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168121 chr1:249168107 . . 0 7 hm5C_associated_SNPs_3547 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168107 249168107 1 + G C rs4926501 249168124 + 249168104 249168144 41 CCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA CCTCCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA < 41bp 1 0.623913180363192 1 0.846112489700317 experiment 0.752173639273617 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168124 chr1:249168107 . . 0 4 hm5C_associated_SNPs_3548 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168097 + 249168077 249168117 41 GGCGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCT GGCGCCAGACTCAAGGTAAGCACCTTGCCTGCGAGCTTTCT < 41bp 1 0.395943130801307 1 0.137116640806198 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168097 chr1:249168110 . . 0 34 hm5C_associated_SNPs_3549 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168099 + 249168079 249168119 41 CGCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGG CGCCAGACTCAAGGTAAGCACCTTGCCTGCGAGCTTTCTGG < 41bp 1 0.0833810551864782 1 0.0974104702472687 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168099 chr1:249168110 . . 0 32 hm5C_associated_SNPs_3550 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168100 + 249168080 249168120 41 GCCAGACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGT GCCAGACTCAAGGTAAGCACCTTGCCTGCGAGCTTTCTGGT < 41bp 1 0.277028220408348 1 0.211683869361877 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168100 chr1:249168110 . . 0 31 hm5C_associated_SNPs_3551 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168104 + 249168084 249168124 41 GACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCC GACTCAAGGTAAGCACCTTGCCTGCGAGCTTTCTGGTCTCC < 41bp 1 0.216066670164037 1 0.0596499741077423 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168104 chr1:249168110 . . 0 27 hm5C_associated_SNPs_3552 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168105 + 249168085 249168125 41 ACTCAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCG ACTCAAGGTAAGCACCTTGCCTGCGAGCTTTCTGGTCTCCG < 41bp 1 0.720857449895736 1 0.212381631135941 experiment 0.558285100208527 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168105 chr1:249168110 . . 0 26 hm5C_associated_SNPs_3553 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168108 + 249168088 249168128 41 CAAGGTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGAT CAAGGTAAGCACCTTGCCTGCGAGCTTTCTGGTCTCCGGAT < 41bp 1 0.619297904565188 1 0.118329167366028 experiment 0.761404190869625 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168108 chr1:249168110 . . 0 23 hm5C_associated_SNPs_3554 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168112 + 249168092 249168132 41 GTAAGCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAG GTAAGCACCTTGCCTGCGAGCTTTCTGGTCTCCGGATGGAG < 41bp 1 0.0565682173816442 1 0.0294259488582611 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168112 chr1:249168110 . . 0 19 hm5C_associated_SNPs_3555 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168116 + 249168096 249168136 41 GCACCTTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGT GCACCTTGCCTGCGAGCTTTCTGGTCTCCGGATGGAGGCGT < 41bp 1 0.794996199725519 1 0.436759620904922 experiment 0.410007600548962 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168116 chr1:249168110 . . 0 15 hm5C_associated_SNPs_3556 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168121 + 249168101 249168141 41 TTGCCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT TTGCCTGCGAGCTTTCTGGTCTCCGGATGGAGGCGTGGGTT < 41bp 1 0.596124574449511 1 0.49519607424736 experiment 0.807750851100977 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168121 chr1:249168110 . . 0 10 hm5C_associated_SNPs_3557 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168110 249168110 1 + G A rs11582086 249168124 + 249168104 249168144 41 CCTGCGGGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA CCTGCGAGCTTTCTGGTCTCCGGATGGAGGCGTGGGTTCGA < 41bp 1 0.651301946786709 1 0.82507187128067 experiment 0.697396106426582 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168124 chr1:249168110 . . 0 7 hm5C_associated_SNPs_3558 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:249168100-249168120
64251 chr1 249168490 249168490 1 + C G rs552356830 249168476 + 249168456 249168496 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGGGGCCCG < 41bp 1 0.296505157153004 1 0.442742913961411 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168476 chr1:249168490 . . 0 35 hm5C_associated_SNPs_3559 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168478 + 249168458 249168498 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGGGGCCCGGG < 41bp 1 0.0867022855488849 1 0.118786215782166 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168478 chr1:249168490 . . 0 33 hm5C_associated_SNPs_3560 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168480 + 249168460 249168500 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCGGCGCTCTCACCGCCGGGGCCCGGGTT < 41bp 1 0.285062842918017 1 0.163883477449417 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168480 chr1:249168490 . . 0 31 hm5C_associated_SNPs_3561 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168482 + 249168462 249168502 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCG < 41bp 1 0.768884515942846 1 0.7138592004776 experiment 0.462230968114307 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168482 chr1:249168490 . . 0 29 hm5C_associated_SNPs_3562 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168484 + 249168464 249168504 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCGAT < 41bp 1 0.412566611712916 1 0.406782478094101 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168484 chr1:249168490 . . 0 27 hm5C_associated_SNPs_3563 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168485 + 249168465 249168505 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCGATT < 41bp 1 0.707098670371917 1 0.890371739864349 experiment 0.585802659256166 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168485 chr1:249168490 . . 0 26 hm5C_associated_SNPs_3564 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168487 + 249168467 249168507 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCGATTCC < 41bp 1 0.632866119047447 1 0.923401236534119 experiment 0.734267761905106 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168487 chr1:249168490 . . 0 24 hm5C_associated_SNPs_3565 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168488 + 249168468 249168508 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCACCGCCGGGGCCCGGGTTCGATTCCC < 41bp 1 0.78456830122349 1 0.923934459686279 experiment 0.43086339755302 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168488 chr1:249168490 . . 0 23 hm5C_associated_SNPs_3566 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168493 + 249168473 249168513 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCACCGCCGGGGCCCGGGTTCGATTCCCGGTCA < 41bp 1 0.631948534318195 1 0.240956723690033 experiment 0.736102931363609 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168493 chr1:249168490 . . 0 18 hm5C_associated_SNPs_3567 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168494 + 249168474 249168514 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCACCGCCGGGGCCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.684854719105838 1 0.32283690571785 experiment 0.630290561788325 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168494 chr1:249168490 . . 0 17 hm5C_associated_SNPs_3568 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168495 + 249168475 249168515 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCACCGCCGGGGCCCGGGTTCGATTCCCGGTCAGG < 41bp 1 0.564046237299298 1 0.561984658241272 experiment 0.871907525401405 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168495 chr1:249168490 . . 0 16 hm5C_associated_SNPs_3569 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168501 + 249168481 249168521 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTA TCACCGCCGGGGCCCGGGTTCGATTCCCGGTCAGGAAAGTA < 41bp 1 0.211096407266951 1 0.0721768140792847 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168501 chr1:249168490 . . 0 10 hm5C_associated_SNPs_3570 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168506 + 249168486 249168526 41 GCCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCG GCCGGGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCG < 41bp 1 0.754800676805251 1 0.766051650047302 experiment 0.490398646389498 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168506 chr1:249168490 . . 0 5 hm5C_associated_SNPs_3571 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168507 + 249168487 249168527 41 CCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGT CCGGGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGT < 41bp 1 0.517511117967989 1 0.316167324781418 experiment 0.964977764064022 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168507 chr1:249168490 . . 0 4 hm5C_associated_SNPs_3572 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168490 249168490 1 + C G rs552356830 249168508 + 249168488 249168528 41 CGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGTT CGGGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGTT < 41bp 1 0.286884362569087 1 0.120271414518356 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168508 chr1:249168490 . . 0 3 hm5C_associated_SNPs_3573 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168476 + 249168456 249168496 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGACCCG < 41bp 1 0.287879642082856 1 0.507046580314636 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168476 chr1:249168492 . . 0 37 hm5C_associated_SNPs_3574 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168478 + 249168458 249168498 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGACCCGGG < 41bp 1 0.0839769864625101 1 0.162508636713028 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168478 chr1:249168492 . . 0 35 hm5C_associated_SNPs_3575 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168480 + 249168460 249168500 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGACCCGGGTT < 41bp 1 0.308392205606804 1 0.147890567779541 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168480 chr1:249168492 . . 0 33 hm5C_associated_SNPs_3576 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168482 + 249168462 249168502 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCGGCGCTCTCACCGCCGCGACCCGGGTTCG < 41bp 1 0.773726213541987 1 0.424626141786575 experiment 0.452547572916027 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168482 chr1:249168492 . . 0 31 hm5C_associated_SNPs_3577 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168484 + 249168464 249168504 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCGGCGCTCTCACCGCCGCGACCCGGGTTCGAT < 41bp 1 0.36291213052079 1 0.431757271289825 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168484 chr1:249168492 . . 0 29 hm5C_associated_SNPs_3578 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168485 + 249168465 249168505 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCGGCGCTCTCACCGCCGCGACCCGGGTTCGATT < 41bp 1 0.589287895406874 1 0.890265822410583 experiment 0.821424209186252 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168485 chr1:249168492 . . 0 28 hm5C_associated_SNPs_3579 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168487 + 249168467 249168507 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCACCGCCGCGACCCGGGTTCGATTCC < 41bp 1 0.350414122867906 1 0.7979336977005 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168487 chr1:249168492 . . 0 26 hm5C_associated_SNPs_3580 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168488 + 249168468 249168508 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCACCGCCGCGACCCGGGTTCGATTCCC < 41bp 1 0.778006713159281 1 0.924761056900024 experiment 0.443986573681437 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168488 chr1:249168492 . . 0 25 hm5C_associated_SNPs_3581 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168490 + 249168470 249168510 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCACCGCCGCGACCCGGGTTCGATTCCCGG < 41bp 1 0.216815795529728 1 0.361228585243225 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168490 chr1:249168492 . . 0 23 hm5C_associated_SNPs_3582 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168493 + 249168473 249168513 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCACCGCCGCGACCCGGGTTCGATTCCCGGTCA < 41bp 1 0.634722381413491 1 0.296830117702484 experiment 0.730555237173018 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168493 chr1:249168492 . . 0 20 hm5C_associated_SNPs_3583 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168494 + 249168474 249168514 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCACCGCCGCGACCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.746983817426997 1 0.577420949935913 experiment 0.506032365146005 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168494 chr1:249168492 . . 0 19 hm5C_associated_SNPs_3584 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168495 + 249168475 249168515 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCACCGCCGCGACCCGGGTTCGATTCCCGGTCAGG < 41bp 1 0.589211647044261 1 0.756175875663757 experiment 0.821576705911477 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168495 chr1:249168492 . . 0 18 hm5C_associated_SNPs_3585 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168501 + 249168481 249168521 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTA TCACCGCCGCGACCCGGGTTCGATTCCCGGTCAGGAAAGTA < 41bp 1 0.154391169689632 1 0.0286838114261627 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168501 chr1:249168492 . . 0 12 hm5C_associated_SNPs_3586 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168506 + 249168486 249168526 41 GCCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCG GCCGCGACCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCG < 41bp 1 0.759328767412032 1 0.790077567100525 experiment 0.481342465175937 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168506 chr1:249168492 . . 0 7 hm5C_associated_SNPs_3587 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168507 + 249168487 249168527 41 CCGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGT CCGCGACCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGT < 41bp 1 0.501774236556903 1 0.349170923233032 experiment 0.996451526886194 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168507 chr1:249168492 . . 0 6 hm5C_associated_SNPs_3588 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr1 249168492 249168492 1 + G A rs560366242 249168508 + 249168488 249168528 41 CGCGGCCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGTT CGCGACCCGGGTTCGATTCCCGGTCAGGAAAGTAAGCCGTT < 41bp 1 0.270369441480077 1 0.170109331607819 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF692;PGBD2 ENSG00000227237;ENSG00000185220 intergenic Human other chr1:249168508 chr1:249168492 . . 0 5 hm5C_associated_SNPs_3589 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:249168469-249168516
64251 chr2 3628503 3628503 1 + C T rs191506876 3628483 + 3628463 3628503 41 TCAATTGTAAACAAAAATGACTAAATAAAAAGTATATATTC TCAATTGTAAACAAAAATGACTAAATAAAAAGTATATATTT < 41bp 1 0.492974316851397 1 0.291646659374237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS7 ENSG00000171863 UTR3 Human protein_coding chr2:3628483 chr2:3628503 . . 0 41 hm5C_associated_SNPs_3591 1 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:3628460-3628520
64251 chr2 10270783 10270783 1 + G T rs531969479 10270797 + 10270777 10270817 41 GATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC GATGGATTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC < 41bp 1 0.443660621045634 1 0.284058570861816 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270797 chr2:10270783 . . 0 7 hm5C_associated_SNPs_3592 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:10270712-10270785
64251 chr2 10270783 10270783 1 + G T rs531969479 10270798 + 10270778 10270818 41 ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCG ATGGATTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCG < 41bp 1 0.52587198171309 1 0.337331891059875 experiment 0.94825603657382 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270798 chr2:10270783 . . 0 6 hm5C_associated_SNPs_3593 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:10270712-10270785
64251 chr2 10270783 10270783 1 + G T rs531969479 10270799 + 10270779 10270819 41 TGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGC TGGATTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGC < 41bp 1 0.583166715081301 1 0.790978968143463 experiment 0.833666569837399 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270799 chr2:10270783 . . 0 5 hm5C_associated_SNPs_3594 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:10270712-10270785
64251 chr2 10270801 10270801 1 + G T rs192657663 10270797 + 10270777 10270817 41 GATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC GATGGAGTCTCGCTCTGTTGCCCATGCTGGAGTGCAGTGGC < 41bp 1 0.303876734455853 1 0.173198580741882 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270797 chr2:10270801 . . 0 25 hm5C_associated_SNPs_3595 0 0 3 FAM120A POSTAR2 ENCODE chr2:10270790-10270815
64251 chr2 10270801 10270801 1 + G T rs192657663 10270798 + 10270778 10270818 41 ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCG ATGGAGTCTCGCTCTGTTGCCCATGCTGGAGTGCAGTGGCG < 41bp 1 0.227237764219649 1 0.136264473199844 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270798 chr2:10270801 . . 0 24 hm5C_associated_SNPs_3596 0 0 3 FAM120A POSTAR2 ENCODE chr2:10270790-10270815
64251 chr2 10270801 10270801 1 + G T rs192657663 10270799 + 10270779 10270819 41 TGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGC TGGAGTCTCGCTCTGTTGCCCATGCTGGAGTGCAGTGGCGC < 41bp 1 0.328527191722202 1 0.135009497404099 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270799 chr2:10270801 . . 0 23 hm5C_associated_SNPs_3597 0 0 3 FAM120A POSTAR2 ENCODE chr2:10270790-10270815
64251 chr2 10270801 10270801 1 + G T rs192657663 10270811 + 10270791 10270831 41 CTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATTTTGGCTCA CTGTTGCCCATGCTGGAGTGCAGTGGCGCGATTTTGGCTCA < 41bp 1 0.764863844540288 1 0.377005517482758 experiment 0.470272310919425 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270811 chr2:10270801 . . 0 11 hm5C_associated_SNPs_3598 0 0 3 FAM120A POSTAR2 ENCODE chr2:10270790-10270815
64251 chr2 10270819 10270819 1 + C T rs187569312 10270799 + 10270779 10270819 41 TGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGC TGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGT < 41bp 1 0.60967216842327 1 0.691536962985992 experiment 0.78065566315346 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270799 chr2:10270819 . . 0 41 hm5C_associated_SNPs_3599 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr2:10270816-10270837
64251 chr2 10270819 10270819 1 + C T rs187569312 10270811 + 10270791 10270831 41 CTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATTTTGGCTCA CTGTTGCCCAGGCTGGAGTGCAGTGGCGTGATTTTGGCTCA < 41bp 1 0.783291510751812 1 0.415422260761261 experiment 0.433416978496375 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RRM2 ENSG00000171848 UTR3 Human protein_coding chr2:10270811 chr2:10270819 . . 0 29 hm5C_associated_SNPs_3600 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr2:10270816-10270837
64251 chr2 11691859 11691859 1 + T C rs559518562 11691864 + 11691844 11691884 41 GTTAGGATTCAGCGCTCCCACCGCCGCAGCCCGGGTTCGAT GTTAGGATTCAGCGCCCCCACCGCCGCAGCCCGGGTTCGAT < 41bp 1 0.0649049188403756 1 0.400290608406067 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GREB1 ENSG00000196208 intronic Human protein_coding chr2:11691864 chr2:11691859 . . 0 16 hm5C_associated_SNPs_3601 0 0 26 SSB POSTAR2 GSE95683,GSM2521599 chr2:11691820-11691880
64251 chr2 11691866 11691866 1 + G A rs184202371 11691864 + 11691844 11691884 41 GTTAGGATTCAGCGCTCCCACCGCCGCAGCCCGGGTTCGAT GTTAGGATTCAGCGCTCCCACCACCGCAGCCCGGGTTCGAT < 41bp 1 0.0428194322586281 1 0.240681976079941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GREB1 ENSG00000196208 intronic Human protein_coding chr2:11691864 chr2:11691866 . . 0 23 hm5C_associated_SNPs_3602 0 0 45 SSB POSTAR2 GSE95683,GSM2521599 chr2:11691820-11691880
64251 chr2 11924293 11924293 1 + G A rs3762583 11924313 + 11924293 11924333 41 GCTGGCATGCACCTGTAATCCCAGCTACTCGGGAGGCTGAG ACTGGCATGCACCTGTAATCCCAGCTACTCGGGAGGCTGAG < 41bp 1 0.149162206716929 1 0.374938666820526 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN1 ENSG00000134324 intronic Human protein_coding chr2:11924313 chr2:11924293 . . 0 1 hm5C_associated_SNPs_3612 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:11924268-11924301
64251 chr2 15770968 15770968 1 + G A rs139636088 15770972 + 15770952 15770992 41 GGCTGCCCTTGAAAAGGAGGCGCAGACATCTTTCCTGCATC GGCTGCCCTTGAAAAGAAGGCGCAGACATCTTTCCTGCATC < 41bp 1 0.584869016313597 1 0.444306463003159 experiment 0.830261967372806 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770972 chr2:15770968 nonsynonymous SNV 0.996 1 17 hm5C_associated_SNPs_3613 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:15770945-15770978
64251 chr2 15770968 15770968 1 + G A rs139636088 15770974 + 15770954 15770994 41 CTGCCCTTGAAAAGGAGGCGCAGACATCTTTCCTGCATCTT CTGCCCTTGAAAAGAAGGCGCAGACATCTTTCCTGCATCTT < 41bp 1 0.200003152343216 1 0.127003401517868 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770974 chr2:15770968 nonsynonymous SNV 0.996 1 15 hm5C_associated_SNPs_3614 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:15770945-15770978
64251 chr2 20646846 20646846 1 + C G rs187592043 20646860 + 20646840 20646880 41 CCACCGCAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGC CCACCGGAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGC < 41bp 1 0.534826382666061 1 0.095941573381424 experiment 0.930347234667879 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOB ENSG00000143878 UTR5 Human protein_coding chr2:20646860 chr2:20646846 . . 0 7 hm5C_associated_SNPs_3615 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:20646840-20646860
64251 chr2 20646868 20646868 1 + T C rs142159875 20646860 + 20646840 20646880 41 CCACCGCAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGC CCACCGCAGTCTGGTTGGAGCTGTTGTCCTGTATGCTCAGC < 41bp 1 0.529970677307929 1 0.0618518888950348 experiment 0.940058645384142 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOB ENSG00000143878 UTR5 Human protein_coding chr2:20646860 chr2:20646868 . . 0 29 hm5C_associated_SNPs_3616 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:20646840-20646880
64251 chr2 20646872 20646872 1 + A G rs146047620 20646860 + 20646840 20646880 41 CCACCGCAGTCTGGTTGGAGCTGTTGTCTTGTATGCTCAGC CCACCGCAGTCTGGTTGGAGCTGTTGTCTTGTGTGCTCAGC < 41bp 1 0.516647400141627 1 0.0526347756385803 experiment 0.966705199716746 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOB ENSG00000143878 UTR5 Human protein_coding chr2:20646860 chr2:20646872 . . 0 33 hm5C_associated_SNPs_3617 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:20646840-20646880
64251 chr2 20647215 20647215 1 + C A rs200862679 20647198 + 20647178 20647218 41 CAGCGAGGCGTTCGCGGGCCCCCTCCTGCTGCCCGGGCCCG CAGCGAGGCGTTCGCGGGCCCCCTCCTGCTGCCCGGGACCG < 41bp 1 0.409428942940269 1 0.0949898362159729 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOB ENSG00000143878 UTR5 Human protein_coding chr2:20647198 chr2:20647215 . . 0 38 hm5C_associated_SNPs_3618 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585666 chr2:20647196-20647218
64251 chr2 24163433 24163433 1 + G A rs112997568 24163437 + 24163417 24163457 41 CGCTCCGGCTCTGAAGGGCTCCAGCCAAACGGAGCCCGCGG CGCTCCGGCTCTGAAGAGCTCCAGCCAAACGGAGCCCGCGG < 41bp 1 0.537418338813076 1 0.66068434715271 experiment 0.925163322373849 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBXN2A ENSG00000173960 UTR5 Human protein_coding chr2:24163437 chr2:24163433 . . 0 17 hm5C_associated_SNPs_3620 0 0 8 DDX3X POSTAR2 ENCODE chr2:24163310-24163458
64251 chr2 24163433 24163433 1 + G A rs112997568 24163438 + 24163418 24163458 41 GCTCCGGCTCTGAAGGGCTCCAGCCAAACGGAGCCCGCGGC GCTCCGGCTCTGAAGAGCTCCAGCCAAACGGAGCCCGCGGC < 41bp 1 0.629937399052404 1 0.715233325958252 experiment 0.740125201895192 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBXN2A ENSG00000173960 UTR5 Human protein_coding chr2:24163438 chr2:24163433 . . 0 16 hm5C_associated_SNPs_3621 0 0 8 DDX3X POSTAR2 ENCODE chr2:24163310-24163458
64251 chr2 24163433 24163433 1 + G A rs112997568 24163451 + 24163431 24163471 41 AGGGCTCCAGCCAAACGGAGCCCGCGGCCAAACGGTGCCTG AGAGCTCCAGCCAAACGGAGCCCGCGGCCAAACGGTGCCTG < 41bp 1 0.29239576199681 1 0.366005301475525 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBXN2A ENSG00000173960 UTR5 Human protein_coding chr2:24163451 chr2:24163433 . . 0 3 hm5C_associated_SNPs_3622 0 0 8 DDX3X POSTAR2 ENCODE chr2:24163310-24163458
64251 chr2 24163433 24163433 1 + G A rs112997568 24163452 + 24163432 24163472 41 GGGCTCCAGCCAAACGGAGCCCGCGGCCAAACGGTGCCTGC GAGCTCCAGCCAAACGGAGCCCGCGGCCAAACGGTGCCTGC < 41bp 1 0.570852003320246 1 0.697417974472046 experiment 0.858295993359508 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBXN2A ENSG00000173960 UTR5 Human protein_coding chr2:24163452 chr2:24163433 . . 0 2 hm5C_associated_SNPs_3623 0 0 8 DDX3X POSTAR2 ENCODE chr2:24163310-24163458
64251 chr2 24276974 24276974 1 + C T rs190430161 24276975 + 24276955 24276995 41 CATCCTCTACTCCTCCCAGCCAGTCTAGTGGGAATGATAAA CATCCTCTACTCCTCCCAGTCAGTCTAGTGGGAATGATAAA < 41bp 1 0.141745464385507 1 0.692674219608307 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FKBP1B ENSG00000119782 CDS Human protein_coding chr2:24276975 chr2:24276974 nonsynonymous SNV . 0 20 hm5C_associated_SNPs_3625 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:24276913-24276976
64251 chr2 24888621 24888621 1 + G A rs185518589 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACAGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA < 41bp 1 0.257852171945238 1 0.586201786994934 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888621 synonymous SNV . 0 9 hm5C_associated_SNPs_3626 0 0 1 SF3B4 POSTAR2 ENCODE chr2:24888560-24888642
64251 chr2 25044957 25044957 1 + G A rs17799872 25044966 + 25044946 25044986 41 TTAAGACCAGAGCTTGGGACCAGGGCTCCTACACCTAATTT TTAAGACCAGAACTTGGGACCAGGGCTCCTACACCTAATTT < 41bp 1 0.748934677439411 1 0.744420886039734 experiment 0.502130645121178 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPO ENSG00000138092 UTR3 Human protein_coding chr2:25044966 chr2:25044957 . . 0 12 hm5C_associated_SNPs_3627 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:25044896-25044975
64251 chr2 26410279 26410279 1 + G A rs550188998 26410281 + 26410261 26410301 41 TCACAGAGCCTCTGAGCGGTCGAGCCGCCTCCCTTCTGGGG TCACAGAGCCTCTGAGCGATCGAGCCGCCTCCCTTCTGGGG < 41bp 1 0.522249667605175 1 0.855853676795959 experiment 0.95550066478965 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26410281 chr2:26410279 nonsynonymous SNV 0.037 1 19 hm5C_associated_SNPs_3628 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:26410203-26410341
64251 chr2 27001607 27001607 1 + G T rs563479596 27001595 + 27001575 27001615 41 TGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCT TGTTACCCAGCCCCCACAAGCCTGAGTGCAGTTGCAGACCT < 41bp 1 0.560793404331806 1 0.391825944185257 experiment 0.878413191336388 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27001595 chr2:27001607 . . 0 33 hm5C_associated_SNPs_3629 0 0 20 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:27001576-27001644
64251 chr2 27001838 27001838 1 + C T rs571147004 27001846 + 27001826 27001866 41 GACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGC GACAGAGTCTCGTTCTGTCGCCCAGGCTGGAGTGCAGTGGC < 41bp 1 0.291273054342856 1 0.226670145988464 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27001846 chr2:27001838 . . 0 13 hm5C_associated_SNPs_3630 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27001791-27001842
64251 chr2 27001838 27001838 1 + C T rs571147004 27001847 + 27001827 27001867 41 ACAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCA ACAGAGTCTCGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCA < 41bp 1 0.276279912288633 1 0.413811832666397 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27001847 chr2:27001838 . . 0 12 hm5C_associated_SNPs_3631 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27001791-27001842
64251 chr2 27001838 27001838 1 + C T rs571147004 27001848 + 27001828 27001868 41 CAGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCAC CAGAGTCTCGTTCTGTCGCCCAGGCTGGAGTGCAGTGGCAC < 41bp 1 0.368271695566924 1 0.63376247882843 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27001848 chr2:27001838 . . 0 11 hm5C_associated_SNPs_3632 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27001791-27001842
64251 chr2 27001877 27001877 1 + C T rs116386619 27001860 + 27001840 27001880 41 CTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCGGC CTGTCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGTGGC < 41bp 1 0.553934202614847 1 0.423260062932968 experiment 0.892131594770305 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27001860 chr2:27001877 . . 0 38 hm5C_associated_SNPs_3633 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27001840-27001885
64251 chr2 27002670 27002670 1 + C T rs566353498 27002650 + 27002630 27002670 41 TGCCTCAGCCTCCCAAAGTGCTGGGGTTACAGGCATGAGCC TGCCTCAGCCTCCCAAAGTGCTGGGGTTACAGGCATGAGCT < 41bp 1 0.785384396780895 1 0.645261287689209 experiment 0.429231206438211 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27002650 chr2:27002670 . . 0 41 hm5C_associated_SNPs_3640 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:27002660-27002680
64251 chr2 27003194 27003194 1 + C T rs530109676 27003185 + 27003165 27003205 41 ACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTCCA ACCCTCAGCTCCTGCAAGGACCTGGGGGATCCCCAGGTCCA < 41bp 1 0.52007858466507 1 0.371006906032562 experiment 0.959842830669861 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27003185 chr2:27003194 . . 0 30 hm5C_associated_SNPs_3653 0 0 2 DDX55 POSTAR2 ENCODE chr2:27003101-27003197
64251 chr2 27003194 27003194 1 + C T rs530109676 27003196 + 27003176 27003216 41 CTGCAAGGACCTGGGGGACCCCCAGGTCCAGCAGCCACATG CTGCAAGGACCTGGGGGATCCCCAGGTCCAGCAGCCACATG < 41bp 1 0.593151730801781 1 0.151642143726349 experiment 0.813696538396437 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27003196 chr2:27003194 . . 0 19 hm5C_associated_SNPs_3654 0 0 2 DDX55 POSTAR2 ENCODE chr2:27003101-27003197
64251 chr2 27003194 27003194 1 + C T rs530109676 27003197 + 27003177 27003217 41 TGCAAGGACCTGGGGGACCCCCAGGTCCAGCAGCCACATGA TGCAAGGACCTGGGGGATCCCCAGGTCCAGCAGCCACATGA < 41bp 1 0.737470251741903 1 0.403276413679123 experiment 0.525059496516195 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27003197 chr2:27003194 . . 0 18 hm5C_associated_SNPs_3655 0 0 2 DDX55 POSTAR2 ENCODE chr2:27003101-27003197
64251 chr2 27003194 27003194 1 + C T rs530109676 27003203 + 27003183 27003223 41 GACCTGGGGGACCCCCAGGTCCAGCAGCCACATGATTCTGC GACCTGGGGGATCCCCAGGTCCAGCAGCCACATGATTCTGC < 41bp 1 0.313521652082686 1 0.142264097929001 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35F6 ENSG00000213699 UTR3 Human protein_coding chr2:27003203 chr2:27003194 . . 0 12 hm5C_associated_SNPs_3656 0 0 2 DDX55 POSTAR2 ENCODE chr2:27003101-27003197
64251 chr2 27273696 27273696 1 + C G rs186601168 27273681 + 27273661 27273701 41 TCAGTTGGTAGAGCGGAGGACTGTAGTGGATAGGGCGTGGC TCAGTTGGTAGAGCGGAGGACTGTAGTGGATAGGGGGTGGC < 41bp 1 0.592446158296169 1 0.165130198001862 experiment 0.815107683407663 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273681 chr2:27273696 . . 0 36 hm5C_associated_SNPs_3657 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27273696 27273696 1 + C G rs186601168 27273701 + 27273681 27273721 41 CTGTAGTGGATAGGGCGTGGCAATCCTTAGGTCGCTGGTTC CTGTAGTGGATAGGGGGTGGCAATCCTTAGGTCGCTGGTTC < 41bp 1 0.166303241986046 1 0.30891752243042 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273701 chr2:27273696 . . 0 16 hm5C_associated_SNPs_3658 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27273696 27273696 1 + C G rs186601168 27273705 + 27273685 27273725 41 AGTGGATAGGGCGTGGCAATCCTTAGGTCGCTGGTTCGATT AGTGGATAGGGGGTGGCAATCCTTAGGTCGCTGGTTCGATT < 41bp 1 0.277213406534341 1 0.199581533670425 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273705 chr2:27273696 . . 0 12 hm5C_associated_SNPs_3659 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27273696 27273696 1 + C G rs186601168 27273706 + 27273686 27273726 41 GTGGATAGGGCGTGGCAATCCTTAGGTCGCTGGTTCGATTC GTGGATAGGGGGTGGCAATCCTTAGGTCGCTGGTTCGATTC < 41bp 1 0.661979974680684 1 0.192621350288391 experiment 0.676040050638632 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273706 chr2:27273696 . . 0 11 hm5C_associated_SNPs_3660 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27273696 27273696 1 + C G rs186601168 27273713 + 27273693 27273733 41 GGGCGTGGCAATCCTTAGGTCGCTGGTTCGATTCCGGCTCG GGGGGTGGCAATCCTTAGGTCGCTGGTTCGATTCCGGCTCG < 41bp 1 0.611287634006753 1 0.468057155609131 experiment 0.777424731986493 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273713 chr2:27273696 . . 0 4 hm5C_associated_SNPs_3661 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27273696 27273696 1 + C G rs186601168 27273715 + 27273695 27273735 41 GCGTGGCAATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA GGGTGGCAATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA < 41bp 1 0.532162070515606 1 0.126632392406464 experiment 0.935675858968788 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27273715 chr2:27273696 . . 0 2 hm5C_associated_SNPs_3662 0 0 90 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:27273620-27273740
64251 chr2 27274097 27274097 1 + A C rs62130539 27274094 + 27274074 27274114 41 CAGCAGGCGGGGGATTAGCTCAAATGGTAGAGCGCTCGCTT CAGCAGGCGGGGGATTAGCTCAACTGGTAGAGCGCTCGCTT < 41bp 1 0.54069016712841 1 0.343141108751297 experiment 0.918619665743179 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5;AGBL5-AS1 ENSG00000084693 intronic Human protein_coding chr2:27274094 chr2:27274097 . . 0 24 hm5C_associated_SNPs_3663 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr2:27274071-27274116
64251 chr2 27274535 27274535 1 + C G rs531629424 27274546 + 27274526 27274566 41 GTTTCCTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGG GTTTCCTGGGAGAGCGGGGTCCCGGCACCGCGGCGCTCGGG < 41bp 1 0.648909926025451 1 0.538470029830933 experiment 0.702180147949097 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274546 chr2:27274535 . . 0 10 hm5C_associated_SNPs_3664 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:27274535-27274536
64251 chr2 27274535 27274535 1 + C G rs531629424 27274547 + 27274527 27274567 41 TTTCCTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGT TTTCCTGGGAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGT < 41bp 1 0.42035444491824 1 0.496864825487137 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274547 chr2:27274535 . . 0 9 hm5C_associated_SNPs_3665 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:27274535-27274536
64251 chr2 27274535 27274535 1 + C G rs531629424 27274551 + 27274531 27274571 41 CTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGTGTTT CTGGGAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGTGTTT < 41bp 1 0.696575241227278 1 0.451280951499939 experiment 0.606849517545444 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274551 chr2:27274535 . . 0 5 hm5C_associated_SNPs_3666 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:27274535-27274536
64251 chr2 27274551 27274551 1 + C T rs562717893 27274546 + 27274526 27274566 41 GTTTCCTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGG GTTTCCTGGCAGAGCGGGGTCCCGGTACCGCGGCGCTCGGG < 41bp 1 0.681835851027284 1 0.325359702110291 experiment 0.636328297945431 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274546 chr2:27274551 . . 0 26 hm5C_associated_SNPs_3667 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27274541-27274568
64251 chr2 27274551 27274551 1 + C T rs562717893 27274547 + 27274527 27274567 41 TTTCCTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGT TTTCCTGGCAGAGCGGGGTCCCGGTACCGCGGCGCTCGGGT < 41bp 1 0.451072106199956 1 0.448059052228928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274547 chr2:27274551 . . 0 25 hm5C_associated_SNPs_3668 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27274541-27274568
64251 chr2 27274551 27274551 1 + C T rs562717893 27274548 + 27274528 27274568 41 TTCCTGGCAGAGCGGGGTCCCGGCACCGCGGCGCTCGGGTG TTCCTGGCAGAGCGGGGTCCCGGTACCGCGGCGCTCGGGTG < 41bp 1 0.772356188869951 1 0.802850127220154 experiment 0.455287622260097 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGBL5 ENSG00000084693 UTR5 Human protein_coding chr2:27274548 chr2:27274551 . . 0 24 hm5C_associated_SNPs_3669 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27274541-27274568
64251 chr2 27302056 27302056 1 + C T rs201008654 27302048 + 27302028 27302068 41 ACACAGGTTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAG ACACAGGTTCCAGTGGGGCCCTCAGCCCTGGGGGGCCCCAG < 41bp 1 0.533904171847983 1 0.201965898275375 experiment 0.932191656304034 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302048 chr2:27302056 synonymous SNV . 0 29 hm5C_associated_SNPs_3671 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302056 27302056 1 + C T rs201008654 27302063 + 27302043 27302083 41 GGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC GGGCCCTCAGCCCTGGGGGGCCCCAGGCCCAGATTGCCCCC < 41bp 1 0.354743006478125 1 0.221380829811096 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302063 chr2:27302056 synonymous SNV . 0 14 hm5C_associated_SNPs_3672 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302056 27302056 1 + C T rs201008654 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGCCCTCAGCCCTGGGGGGCCCCAGGCCCAGATTGCCCCCC < 41bp 1 0.321225450645426 1 0.557114839553833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302056 synonymous SNV . 0 13 hm5C_associated_SNPs_3673 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302056 27302056 1 + C T rs201008654 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GCCCTCAGCCCTGGGGGGCCCCAGGCCCAGATTGCCCCCCG < 41bp 1 0.607516998700239 1 0.682278692722321 experiment 0.784966002599521 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302056 synonymous SNV . 0 12 hm5C_associated_SNPs_3674 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302056 27302056 1 + C T rs201008654 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG CCCTCAGCCCTGGGGGGCCCCAGGCCCAGATTGCCCCCCGG < 41bp 1 0.627791342740807 1 0.879024803638458 experiment 0.744417314518386 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302056 synonymous SNV . 0 11 hm5C_associated_SNPs_3675 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27440785 27440785 1 + C T rs1275536 27440789 + 27440769 27440809 41 ACCCCGAGGCCCTCACCGATCCCTCCTACAAGGCACAGATC ACCCCGAGGCCCTCACTGATCCCTCCTACAAGGCACAGATC < 41bp 1 0.0535751343117121 1 0.112846612930298 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27440789 chr2:27440785 synonymous SNV . 0 17 hm5C_associated_SNPs_3677 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:27440784-27440785
64251 chr2 27449440 27449440 1 + G A rs61737363 27449451 + 27449431 27449471 41 CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTT CTCTGCCCTAGCCAGTAAGGCCACAGGTTATCCACTGGCTT < 41bp 1 0.133846054452972 1 0.153986573219299 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27449451 chr2:27449440 synonymous SNV . 0 10 hm5C_associated_SNPs_3678 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27449393-27449445
64251 chr2 27455023 27455023 1 + C T rs144292695 27455031 + 27455011 27455051 41 GACAGCCTTTGCCGCCAGACCTGCTGCAACAGGCCAAGTGT GACAGCCTTTGCTGCCAGACCTGCTGCAACAGGCCAAGTGT < 41bp 1 0.291253393264137 1 0.455658972263336 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455031 chr2:27455023 nonsynonymous SNV 0.065 3 13 hm5C_associated_SNPs_3679 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27454984-27455032
64251 chr2 27455024 27455024 1 + G A rs147159197 27455031 + 27455011 27455051 41 GACAGCCTTTGCCGCCAGACCTGCTGCAACAGGCCAAGTGT GACAGCCTTTGCCACCAGACCTGCTGCAACAGGCCAAGTGT < 41bp 1 0.249184722081254 1 0.271042287349701 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455031 chr2:27455024 synonymous SNV . 0 14 hm5C_associated_SNPs_3680 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27454984-27455032
64251 chr2 27456275 27456275 1 + G A rs143119049 27456273 + 27456253 27456293 41 ACATGGCCATGGCGTTGCATCGGCAGCAGTGCCGGGTGCTG ACATGGCCATGGCGTTGCATCGACAGCAGTGCCGGGTGCTG < 41bp 1 0.66698876781562 1 0.585732281208038 experiment 0.666022464368759 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456273 chr2:27456275 synonymous SNV . 0 23 hm5C_associated_SNPs_3681 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27456275-27456306
64251 chr2 28974746 28974746 1 + C T rs559818092 28974764 + 28974744 28974784 41 CGCGGCCCTGTTCGAGGGGGCCTCTCTTGTTTATTTATTTA CGTGGCCCTGTTCGAGGGGGCCTCTCTTGTTTATTTATTTA < 41bp 1 0.0573679767623553 1 0.0473597347736359 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1CB ENSG00000213639 UTR5 Human protein_coding chr2:28974764 chr2:28974746 . . 0 3 hm5C_associated_SNPs_3688 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:28974740-28974760
64251 chr2 29022959 29022959 1 + T C rs11687800 29022948 + 29022928 29022968 41 GCATTTCATTTAAGATAAGGCTCATATAGTATTACCCAACT GCATTTCATTTAAGATAAGGCTCATATAGTACTACCCAACT < 41bp 1 0.241653150299009 1 0.0931990742683411 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP1CB ENSG00000213639 UTR3 Human protein_coding chr2:29022948 chr2:29022959 . . 0 32 hm5C_associated_SNPs_3689 0 0 17 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:29022922-29022970
64251 chr2 29149948 29149948 1 + C T rs139731773 29149964 + 29149944 29149984 41 ACATCCATATGGTTTCGCTGCTGGCTGAGTTTCAGAGATGA ACATTCATATGGTTTCGCTGCTGGCTGAGTTTCAGAGATGA < 41bp 1 0.21551835914659 1 0.29418408870697 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD53 ENSG00000265145 ncRNA_exonic Human snoRNA chr2:29149964 chr2:29149948 . . 0 5 hm5C_associated_SNPs_3690 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:29149932-29149960
64251 chr2 29150877 29150877 1 + C T rs147877573 29150884 + 29150864 29150904 41 TCATTGGGTTTCGCATGTTGCTGAGTTCCAGTGATGCCTCT TCATTGGGTTTCGTATGTTGCTGAGTTCCAGTGATGCCTCT < 41bp 1 0.470594803093198 1 0.319303631782532 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD53B ENSG00000265706 ncRNA_exonic Human snoRNA chr2:29150884 chr2:29150877 . . 0 14 hm5C_associated_SNPs_3691 0 0 25 NOP58 POSTAR2 GSE43666,GSM1067861 chr2:29150836-29150927
64251 chr2 29150926 29150926 1 + A G rs546145183 29150924 + 29150904 29150944 41 TTTTCTCTTGGCTGTCTGAGCAATCCTGGCTAACCTAGTGC TTTTCTCTTGGCTGTCTGAGCAGTCCTGGCTAACCTAGTGC < 41bp 1 0.0693039317223043 1 0.32476007938385 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD53B ENSG00000265706 ncRNA_exonic Human snoRNA chr2:29150924 chr2:29150926 . . 0 23 hm5C_associated_SNPs_3692 0 0 17 NOP58 POSTAR2 GSE43666,GSM1067861 chr2:29150836-29150927
64251 chr2 29159814 29159814 1 + T C rs145420330 29159809 + 29159789 29159829 41 TTACAAAGAGGTTACAAGGACATCCTAATAGGTAAGATTAA TTACAAAGAGGTTACAAGGACATCCCAATAGGTAAGATTAA < 41bp 1 0.0740293481823461 1 0.190014392137527 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR43 ENSG00000163811 CDS Human protein_coding chr2:29159809 chr2:29159814 synonymous SNV . 0 26 hm5C_associated_SNPs_3693 0 0 14 EWSR1 POSTAR2 SRX029344 chr2:29159787-29159818
64251 chr2 29170124 29170124 1 + G A rs538253184 29170105 + 29170085 29170125 41 TTAGTACATTTAATTTGGTACATTTTCATAAAATATGAAGG TTAGTACATTTAATTTGGTACATTTTCATAAAATATGAAAG < 41bp 1 0.0362242182462955 1 0.0260713398456573 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170105 chr2:29170124 . . 0 40 hm5C_associated_SNPs_3694 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:29170051-29170141
64251 chr2 29170125 29170125 1 + G A rs188446761 29170105 + 29170085 29170125 41 TTAGTACATTTAATTTGGTACATTTTCATAAAATATGAAGG TTAGTACATTTAATTTGGTACATTTTCATAAAATATGAAGA < 41bp 1 0.0334350688698403 1 0.0280688107013702 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR43 ENSG00000163811 UTR3 Human protein_coding chr2:29170105 chr2:29170125 . . 0 41 hm5C_associated_SNPs_3695 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:29170051-29170141
64251 chr2 30454462 30454462 1 + C T rs578189843 30454454 + 30454434 30454474 41 CACCTTGCCGACGTCGCTAGCCGTGGGGCTGTCCTGGGAAG CACCTTGCCGACGTCGCTAGCCGTGGGGTTGTCCTGGGAAG < 41bp 1 0.441634336789836 1 0.165527433156967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LBH ENSG00000213626 UTR5 Human protein_coding chr2:30454454 chr2:30454462 . . 0 29 hm5C_associated_SNPs_3697 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:30454460-30454480
64251 chr2 32724715 32724715 1 + C G rs150127918 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTGTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC < 41bp 1 0.0508168956668169 1 0.219418168067932 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724715 nonsynonymous SNV 0.999 2 6 hm5C_associated_SNPs_3708 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:32724680-32724720
64251 chr2 32773012 32773012 1 + T C rs142781350 32773028 + 32773008 32773048 41 CTTCTGGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGG CTTCCGGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGG < 41bp 1 0.156035733090535 1 0.433984160423279 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773028 chr2:32773012 synonymous SNV . 0 5 hm5C_associated_SNPs_3709 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:32772993-32773022
64251 chr2 37458862 37458862 1 + T C rs141773676 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCCGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG < 41bp 1 0.541138385059934 1 0.116649478673935 experiment 0.917723229880132 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458862 nonsynonymous SNV 0.001 1 3 hm5C_associated_SNPs_3714 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:37458839-37458870
64251 chr2 37458885 37458885 1 + T G rs530133541 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCTGAGGTCAGGTTTGGGGCCGTTGGGTGCCGTGGCGCGCG < 41bp 1 0.637927312562941 1 0.291138112545013 experiment 0.724145374874117 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458885 nonsynonymous SNV 0.001 1 26 hm5C_associated_SNPs_3715 0 0 5 DDX3X POSTAR2 ENCODE chr2:37458802-37458905
64251 chr2 37458898 37458898 1 + G A rs72875762 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCACG < 41bp 1 0.54852481694585 1 0.08832186460495 experiment 0.9029503661083 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458898 nonsynonymous SNV 0.006 2 39 hm5C_associated_SNPs_3716 1 0 5 DDX3X POSTAR2 ENCODE chr2:37458802-37458905
64251 chr2 37475339 37475339 1 + T A rs369731209 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATAAGTTAATGAATCCAAAGAAGATGGGAGAGAGA < 41bp 1 0.367111687344792 1 0.595303356647491 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475339 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_3717 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475339 37475339 1 + T A rs369731209 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATAAGTTAATGAATCCAAAGAAGATGGGAGAGAGAT < 41bp 1 0.38002884041131 1 0.3550044298172 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475339 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_3718 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 39008949 39008949 1 + G A rs1056104 39008951 + 39008931 39008971 41 CTATAGACCCACCATATGGTCCAGAAAATTGCAGCAGCTCT CTATAGACCCACCATATGATCCAGAAAATTGCAGCAGCTCT < 41bp 1 0.587147997000752 1 0.39697128534317 experiment 0.825704005998495 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008951 chr2:39008949 nonsynonymous SNV 0.949 0 19 hm5C_associated_SNPs_3719 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:39008943-39008974
64251 chr2 39009025 39009025 1 + T A rs149539286 39009029 + 39009009 39009049 41 AAGGACATCTTACAGCTTCCCAATGAGAGGCCAGGAAGTGT AAGGACATCTTACAGCATCCCAATGAGAGGCCAGGAAGTGT < 41bp 1 0.222815128600718 1 0.173330694437027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39009029 chr2:39009025 synonymous SNV . 0 17 hm5C_associated_SNPs_3720 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:39008981-39009043
64251 chr2 39664597 39664597 1 + G A rs188536328 39664578 + 39664558 39664598 41 CGCGTTCCGGCTCCGCGCGCCTGCCAGGCCGGGGCCGGCGG CGCGTTCCGGCTCCGCGCGCCTGCCAGGCCGGGGCCGGCAG < 41bp 1 0.603139698481566 1 0.176165014505386 experiment 0.793720603036868 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC728730 ENSG00000231312 ncRNA_exonic Human antisense chr2:39664578 chr2:39664597 . . 0 40 hm5C_associated_SNPs_3721 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:39664597-39664598
64251 chr2 42275661 42275661 1 + C T rs557784874 42275674 + 42275654 42275694 41 CCGGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTC CCGGCCCTTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTC < 41bp 1 0.753218863989346 1 0.145161867141724 experiment 0.493562272021308 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275674 chr2:42275661 synonymous SNV . 0 8 hm5C_associated_SNPs_3722 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 42275661 42275661 1 + C T rs557784874 42275675 + 42275655 42275695 41 CGGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCC CGGCCCTTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCC < 41bp 1 0.643241900379569 1 0.417932003736496 experiment 0.713516199240862 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275675 chr2:42275661 synonymous SNV . 0 7 hm5C_associated_SNPs_3723 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 42275661 42275661 1 + C T rs557784874 42275676 + 42275656 42275696 41 GGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCCC GGCCCTTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCCC < 41bp 1 0.748284382887891 1 0.221616864204407 experiment 0.503431234224218 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275676 chr2:42275661 synonymous SNV . 0 6 hm5C_associated_SNPs_3724 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 42275664 42275664 1 + T C rs187184761 42275674 + 42275654 42275694 41 CCGGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTC CCGGCCCCTGCCCGACGGCGCCCCAGGCTGGCCCCCGGCTC < 41bp 1 0.740270947828168 1 0.135548830032349 experiment 0.519458104343665 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275674 chr2:42275664 nonsynonymous SNV 0.905 0 11 hm5C_associated_SNPs_3725 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 42275664 42275664 1 + T C rs187184761 42275675 + 42275655 42275695 41 CGGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCC CGGCCCCTGCCCGACGGCGCCCCAGGCTGGCCCCCGGCTCC < 41bp 1 0.655081399302508 1 0.541249632835388 experiment 0.689837201394985 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275675 chr2:42275664 nonsynonymous SNV 0.905 0 10 hm5C_associated_SNPs_3726 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 42275664 42275664 1 + T C rs187184761 42275676 + 42275656 42275696 41 GGCCCCTGTCCGACGGCGCCCCAGGCTGGCCCCCGGCTCCC GGCCCCTGCCCGACGGCGCCCCAGGCTGGCCCCCGGCTCCC < 41bp 1 0.730366612020031 1 0.274721771478653 experiment 0.539266775959937 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKDCC ENSG00000162878 CDS Human protein_coding chr2:42275676 chr2:42275664 nonsynonymous SNV 0.905 0 9 hm5C_associated_SNPs_3727 0 0 1 DHX30 POSTAR2 ENCODE chr2:42275654-42275720
64251 chr2 43037731 43037731 1 + C A rs548826986 43037717 + 43037697 43037737 41 AGCGCGCGGTACTTATACAGCAGTACATGCAGAGCAATGCC AGCGCGCGGTACTTATACAGCAGTACATGCAGAGAAATGCC < 41bp 1 0.559629595342849 1 0.203029364347458 experiment 0.880740809314302 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HAAO;LINC01819 ENSG00000226491;ENSG00000232202 intergenic Human other chr2:43037717 chr2:43037731 . . 0 35 hm5C_associated_SNPs_3728 0 0 74 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:43037660-43037760
64251 chr2 43037731 43037731 1 + C A rs548826986 43037736 + 43037716 43037756 41 GCAGTACATGCAGAGCAATGCCGAGGTTGTGAGTTCGAGCC GCAGTACATGCAGAGAAATGCCGAGGTTGTGAGTTCGAGCC < 41bp 1 0.53604635893899 1 0.491112470626831 experiment 0.927907282122021 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HAAO;LINC01819 ENSG00000226491;ENSG00000232202 intergenic Human other chr2:43037736 chr2:43037731 . . 0 16 hm5C_associated_SNPs_3729 0 0 74 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:43037660-43037760
64251 chr2 43037731 43037731 1 + C A rs548826986 43037751 + 43037731 43037771 41 CAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCAAGA AAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCAAGA < 41bp 1 0.504205302776251 1 0.322270393371582 experiment 0.991589394447498 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HAAO;LINC01819 ENSG00000226491;ENSG00000232202 intergenic Human other chr2:43037751 chr2:43037731 . . 0 1 hm5C_associated_SNPs_3730 0 0 74 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:43037660-43037760
64251 chr2 46607644 46607644 1 + C T rs41281469 46607626 + 46607606 46607646 41 CCCGAGCACCGGCCCATGTCCTCCATCTTCTTTGATGCCGG CCCGAGCACCGGCCCATGTCCTCCATCTTCTTTGATGCTGG < 41bp 1 0.761394004379498 1 0.868605017662048 experiment 0.477211991241004 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607626 chr2:46607644 synonymous SNV . 0 39 hm5C_associated_SNPs_3734 1 0 1 RBM15 POSTAR2 ENCODE chr2:46607642-46607724
64251 chr2 46612707 46612707 1 + G A rs546157125 46612697 + 46612677 46612717 41 CAGTGCTCCCACGGCCTGTACGGACACTGTGGAAGGCCTCC CAGTGCTCCCACGGCCTGTACGGACACTGTAGAAGGCCTCC < 41bp 1 0.28059301560399 1 0.254287600517273 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612697 chr2:46612707 . . 0 31 hm5C_associated_SNPs_3735 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612701 + 46612681 46612721 41 GCTCCCACGGCCTGTACGGACACTGTGGAAGGCCTCCCTCT GCTCCCACGGCCTGTACGGACACTGTAGAAGGCCTCCCTCT < 41bp 1 0.740199305704621 1 0.143569260835648 experiment 0.519601388590758 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612701 chr2:46612707 . . 0 27 hm5C_associated_SNPs_3736 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612713 + 46612693 46612733 41 TGTACGGACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTG TGTACGGACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTG < 41bp 1 0.040641550817985 1 0.0147075057029724 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612713 chr2:46612707 . . 0 15 hm5C_associated_SNPs_3737 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612714 + 46612694 46612734 41 GTACGGACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTGC GTACGGACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTGC < 41bp 1 0.205685357255955 1 0.0533459782600403 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612714 chr2:46612707 . . 0 14 hm5C_associated_SNPs_3738 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612716 + 46612696 46612736 41 ACGGACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTGCCA ACGGACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTGCCA < 41bp 1 0.101728485046165 1 0.0736076831817627 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612716 chr2:46612707 . . 0 12 hm5C_associated_SNPs_3739 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612717 + 46612697 46612737 41 CGGACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTGCCAT CGGACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTGCCAT < 41bp 1 0.170168816984008 1 0.0290047824382782 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612717 chr2:46612707 . . 0 11 hm5C_associated_SNPs_3740 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612718 + 46612698 46612738 41 GGACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTGCCATC GGACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTGCCATC < 41bp 1 0.481145072356663 1 0.171768695116043 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612718 chr2:46612707 . . 0 10 hm5C_associated_SNPs_3741 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612720 + 46612700 46612740 41 ACACTGTGGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTG ACACTGTAGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTG < 41bp 1 0.359162579693769 1 0.385078310966492 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612720 chr2:46612707 . . 0 8 hm5C_associated_SNPs_3742 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612724 + 46612704 46612744 41 TGTGGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTGTGAT TGTAGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTGTGAT < 41bp 1 0.621957300197359 1 0.724633693695068 experiment 0.756085399605281 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612724 chr2:46612707 . . 0 4 hm5C_associated_SNPs_3743 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612707 46612707 1 + G A rs546157125 46612727 + 46612707 46612747 41 GGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTGTGATATG AGAAGGCCTCCCTCTGTCGGCTTTTTGCCATCTGTGATATG < 41bp 1 0.0524949134346308 1 0.0168508589267731 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612727 chr2:46612707 . . 0 1 hm5C_associated_SNPs_3744 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:46612671-46612713
64251 chr2 46612797 46612797 1 + G A rs74562492 46612778 + 46612758 46612798 41 GACAATCCGAGCAGTGGAGTCATTCAGCGGGAGCACTGCGC GACAATCCGAGCAGTGGAGTCATTCAGCGGGAGCACTGCAC < 41bp 1 0.106406209955959 1 0.0481317341327667 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612778 chr2:46612797 . . 0 40 hm5C_associated_SNPs_3745 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612791 + 46612771 46612811 41 GTGGAGTCATTCAGCGGGAGCACTGCGCGCTATCCCCTCAC GTGGAGTCATTCAGCGGGAGCACTGCACGCTATCCCCTCAC < 41bp 1 0.295457656779519 1 0.24131053686142 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612791 chr2:46612797 . . 0 27 hm5C_associated_SNPs_3746 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612793 + 46612773 46612813 41 GGAGTCATTCAGCGGGAGCACTGCGCGCTATCCCCTCACAT GGAGTCATTCAGCGGGAGCACTGCACGCTATCCCCTCACAT < 41bp 1 0.631203489991217 1 0.588499307632446 experiment 0.737593020017566 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612793 chr2:46612797 . . 0 25 hm5C_associated_SNPs_3747 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612796 + 46612776 46612816 41 GTCATTCAGCGGGAGCACTGCGCGCTATCCCCTCACATTCT GTCATTCAGCGGGAGCACTGCACGCTATCCCCTCACATTCT < 41bp 1 0.483743124844069 1 0.180527746677399 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612796 chr2:46612797 . . 0 22 hm5C_associated_SNPs_3748 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612798 + 46612778 46612818 41 CATTCAGCGGGAGCACTGCGCGCTATCCCCTCACATTCTCT CATTCAGCGGGAGCACTGCACGCTATCCCCTCACATTCTCT < 41bp 1 0.460659753448081 1 0.0801478028297424 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612798 chr2:46612797 . . 0 20 hm5C_associated_SNPs_3749 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612800 + 46612780 46612820 41 TTCAGCGGGAGCACTGCGCGCTATCCCCTCACATTCTCTAT TTCAGCGGGAGCACTGCACGCTATCCCCTCACATTCTCTAT < 41bp 1 0.147595792017156 1 0.0382672548294067 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612800 chr2:46612797 . . 0 18 hm5C_associated_SNPs_3750 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612804 + 46612784 46612824 41 GCGGGAGCACTGCGCGCTATCCCCTCACATTCTCTATGTAC GCGGGAGCACTGCACGCTATCCCCTCACATTCTCTATGTAC < 41bp 1 0.129228617245964 1 0.141416072845459 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612804 chr2:46612797 . . 0 14 hm5C_associated_SNPs_3751 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612805 + 46612785 46612825 41 CGGGAGCACTGCGCGCTATCCCCTCACATTCTCTATGTACT CGGGAGCACTGCACGCTATCCCCTCACATTCTCTATGTACT < 41bp 1 0.0195186459967183 1 0.0445503294467926 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612805 chr2:46612797 . . 0 13 hm5C_associated_SNPs_3752 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612806 + 46612786 46612826 41 GGGAGCACTGCGCGCTATCCCCTCACATTCTCTATGTACTA GGGAGCACTGCACGCTATCCCCTCACATTCTCTATGTACTA < 41bp 1 0.155394508821934 1 0.124418079853058 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612806 chr2:46612797 . . 0 12 hm5C_associated_SNPs_3753 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 46612797 46612797 1 + G A rs74562492 46612807 + 46612787 46612827 41 GGAGCACTGCGCGCTATCCCCTCACATTCTCTATGTACTAT GGAGCACTGCACGCTATCCCCTCACATTCTCTATGTACTAT < 41bp 1 0.13009205804753 1 0.0480668246746063 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 UTR3 Human protein_coding chr2:46612807 chr2:46612797 . . 0 11 hm5C_associated_SNPs_3754 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:46612747-46612802
64251 chr2 48026159 48026159 1 + C G rs567785169 48026173 + 48026153 48026193 41 AAAATTCTGAATCCCAAGCCCACGTTAGTGGAGGTGGTGAT AAAATTGTGAATCCCAAGCCCACGTTAGTGGAGGTGGTGAT < 41bp 1 0.481014051426111 1 0.118831276893616 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026173 chr2:48026159 nonsynonymous SNV 0.443 1 7 hm5C_associated_SNPs_3755 2 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:48026121-48026159
64251 chr2 48027755 48027755 1 + T C rs2020912 48027758 + 48027738 48027778 41 AGGGATCATGGAAGAAGTTGCTGATGGTTTTAAGTCTAAAA AGGGATCATGGAAGAAGCTGCTGATGGTTTTAAGTCTAAAA < 41bp 1 0.186620827903589 1 0.066417008638382 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48027758 chr2:48027755 nonsynonymous SNV 0.259 1 18 hm5C_associated_SNPs_3756 6 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027684-48027770
64251 chr2 54858664 54858664 1 + C T rs2229503 54858649 + 54858629 54858669 41 ACTGGATGGAACGAGCTCCACAAGATGTGGGAGAACAGACA ACTGGATGGAACGAGCTCCACAAGATGTGGGAGAATAGACA < 41bp 1 0.61431605880134 1 0.511878490447998 experiment 0.77136788239732 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858649 chr2:54858664 synonymous SNV . 0 36 hm5C_associated_SNPs_3757 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:54858632-54858667
64251 chr2 54885159 54885159 1 + C T rs190911566 54885175 + 54885155 54885195 41 GGTTCTCTGCCCTGGAAAGGCTGACTACAGTAAGTGGCCGC GGTTTTCTGCCCTGGAAAGGCTGACTACAGTAAGTGGCCGC < 41bp 1 0.282238560430761 1 0.199776470661163 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54885175 chr2:54885159 synonymous SNV . 0 5 hm5C_associated_SNPs_3758 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54885127-54885163
64251 chr2 54886335 54886335 1 + G A rs140377991 54886315 + 54886295 54886335 41 AGTTACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGG AGTTACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGA < 41bp 1 0.611331472017298 1 0.747583031654358 experiment 0.777337055965404 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886315 chr2:54886335 synonymous SNV . 0 41 hm5C_associated_SNPs_3759 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chr2 54886335 54886335 1 + G A rs140377991 54886318 + 54886298 54886338 41 TACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGGAAG TACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGAAAG < 41bp 1 0.7107154695908 1 0.75758945941925 experiment 0.578569060818399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886318 chr2:54886335 synonymous SNV . 0 38 hm5C_associated_SNPs_3760 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chr2 55191144 55191144 1 + T G rs534776499 55191153 + 55191133 55191173 41 CAAGGTGAGCTTGGGCCATGCGGCCAGGTGTGCAGCCTACA CAAGGTGAGCTGGGGCCATGCGGCCAGGTGTGCAGCCTACA < 41bp 1 0.297998269265467 1 0.603720307350159 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EML6 ENSG00000214595 CDS Human protein_coding chr2:55191153 chr2:55191144 nonsynonymous SNV 0.997 3 12 hm5C_associated_SNPs_3761 0 0 1 EIF3H POSTAR2 ENCODE chr2:55191121-55191163
64251 chr2 55277294 55277294 1 - T A rs201394469 55277299 - 55277279 55277319 41 GAGGAAGAGGAGGACGAGGACGAAGACCTGGAGGAGCTGGA GAGGAAGAGGAGGACGAGGACGAAGTCCTGGAGGAGCTGGA < 41bp 1 0.726348418534674 1 0.765685081481934 experiment 0.547303162930652 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTN4 ENSG00000115310 CDS Human protein_coding chr2:55277299 chr2:55277294 nonsynonymous SNV 0.126 0 26 hm5C_associated_SNPs_3762 0 0 25 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:55277260-55277300
64251 chr2 55459923 55459923 1 + C G rs543843126 55459912 + 55459892 55459932 41 CTTCTCTTGTGATCCCTGACCTAACCTGTCTCTTCCTTTTC CTTCTCTTGTGATCCCTGACCTAACCTGTCTGTTCCTTTTC < 41bp 1 0.113225115996386 1 0.0645709335803986 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS27A ENSG00000143947 UTR5 Human protein_coding chr2:55459912 chr2:55459923 . . 0 32 hm5C_associated_SNPs_3763 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:55459829-55459957
64251 chr2 55459927 55459927 1 + C G rs192298313 55459912 + 55459892 55459932 41 CTTCTCTTGTGATCCCTGACCTAACCTGTCTCTTCCTTTTC CTTCTCTTGTGATCCCTGACCTAACCTGTCTCTTCGTTTTC < 41bp 1 0.0943114472216594 1 0.0570149123668671 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS27A ENSG00000143947 UTR5 Human protein_coding chr2:55459912 chr2:55459927 . . 0 36 hm5C_associated_SNPs_3764 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:55459829-55459957
64251 chr2 55461991 55461991 1 + A C rs2230613 55461971 + 55461951 55461991 41 ATTCTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGA ATTCTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGC < 41bp 1 0.167641328353461 1 0.072692334651947 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461971 chr2:55461991 synonymous SNV . 0 41 hm5C_associated_SNPs_3765 0 0 6 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr2 55461991 55461991 1 + A C rs2230613 55461974 + 55461954 55461994 41 CTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGAC CTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGCGAC < 41bp 1 0.135783132053706 1 0.136200338602066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461974 chr2:55461991 synonymous SNV . 0 38 hm5C_associated_SNPs_3766 0 0 6 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr2 55461991 55461991 1 + A C rs2230613 55461979 + 55461959 55461999 41 ATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGT ATTAACAGGAGTCTACTCTTCATCTTGTGTTGCGACTTCGT < 41bp 1 0.184577844500369 1 0.0366038382053375 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461979 chr2:55461991 synonymous SNV . 0 33 hm5C_associated_SNPs_3767 0 0 6 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr2 55461991 55461991 1 + A C rs2230613 55462007 + 55461987 55462027 41 GTTGAGACTTCGTGGTGGTGCTAAGAAAAGGAAGAAGAAGT GTTGCGACTTCGTGGTGGTGCTAAGAAAAGGAAGAAGAAGT < 41bp 1 0.381594366282405 1 0.206069052219391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462007 chr2:55461991 synonymous SNV . 0 5 hm5C_associated_SNPs_3768 0 0 6 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr2 60987375 60987375 1 + A G rs140672094 60987390 + 60987370 60987410 41 AATTAATTGACGCCATGAAACCATTTGGAGTGTTTGAAGAT AATTAGTTGACGCCATGAAACCATTTGGAGTGTTTGAAGAT < 41bp 1 0.086795965076582 1 0.0692794322967529 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60987390 chr2:60987375 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_3769 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:60987374-60987375
64251 chr2 61349807 61349807 1 + A G rs150390047 61349799 + 61349779 61349819 41 GCATGAATATTAAGGAGTGACAGGTCTCAAGACTGCATTAA GCATGAATATTAAGGAGTGACAGGTCTCGAGACTGCATTAA < 41bp 1 0.618117657247085 1 0.394179344177246 experiment 0.763764685505829 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1841 ENSG00000162929 UTR3 Human protein_coding chr2:61349799 chr2:61349807 . . 0 29 hm5C_associated_SNPs_3770 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:61349790-61349822
64251 chr2 61349807 61349807 1 + A G rs150390047 61349806 + 61349786 61349826 41 TATTAAGGAGTGACAGGTCTCAAGACTGCATTAAATGAAGT TATTAAGGAGTGACAGGTCTCGAGACTGCATTAAATGAAGT < 41bp 1 0.707194957787425 1 0.786545872688293 experiment 0.585610084425151 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1841 ENSG00000162929 UTR3 Human protein_coding chr2:61349806 chr2:61349807 . . 0 22 hm5C_associated_SNPs_3771 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:61349790-61349822
64251 chr2 61349807 61349807 1 + A G rs150390047 61349814 + 61349794 61349834 41 AGTGACAGGTCTCAAGACTGCATTAAATGAAGTTTCAGGGT AGTGACAGGTCTCGAGACTGCATTAAATGAAGTTTCAGGGT < 41bp 1 0.398987067155275 1 0.196727067232132 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1841 ENSG00000162929 UTR3 Human protein_coding chr2:61349814 chr2:61349807 . . 0 14 hm5C_associated_SNPs_3772 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:61349790-61349822
64251 chr2 63284022 63284022 1 + G A rs574062953 63284015 + 63283995 63284035 41 GCCTCCCGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGGG GCCTCCCGGCGTTTCTTCCGCCCCAGCAGAGTGCGCTGGGG < 41bp 1 0.640468554220679 1 0.400256931781769 experiment 0.719062891558642 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63284015 chr2:63284022 . . 0 28 hm5C_associated_SNPs_3773 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:63283994-63284025
64251 chr2 63284022 63284022 1 + G A rs574062953 63284021 + 63284001 63284041 41 CGGCGTTTCTTCCGCCCCAGCGGAGTGCGCTGGGGCGCGCC CGGCGTTTCTTCCGCCCCAGCAGAGTGCGCTGGGGCGCGCC < 41bp 1 0.766939583171459 1 0.638569474220276 experiment 0.466120833657082 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63284021 chr2:63284022 . . 0 22 hm5C_associated_SNPs_3774 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:63283994-63284025
64251 chr2 63284022 63284022 1 + G A rs574062953 63284036 + 63284016 63284056 41 CCCAGCGGAGTGCGCTGGGGCGCGCCAGGGCTAGGCCCGCC CCCAGCAGAGTGCGCTGGGGCGCGCCAGGGCTAGGCCCGCC < 41bp 1 0.776535042543966 1 0.429765820503235 experiment 0.446929914912068 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63284036 chr2:63284022 . . 0 7 hm5C_associated_SNPs_3775 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:63283994-63284025
64251 chr2 63834111 63834111 1 + C T rs142463350 63834096 + 63834076 63834116 41 GACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTCCTCTG GACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTTCTCTG < 41bp 1 0.056039727286488 1 0.0401997268199921 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834096 chr2:63834111 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_3776 0 0 24 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:63834084-63834126
64251 chr2 64118444 64118444 1 + C G rs142367970 64118438 + 64118418 64118458 41 CTCTAGGATTCTAAAATAGGCAGGTACTTTACTATGTTACT CTCTAGGATTCTAAAATAGGCAGGTAGTTTACTATGTTACT < 41bp 1 0.518156188960672 1 0.181580394506454 experiment 0.963687622078657 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UGP2 ENSG00000169764 UTR3 Human protein_coding chr2:64118438 chr2:64118444 . . 0 27 hm5C_associated_SNPs_3777 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:64118424-64118459
64251 chr2 70096862 70096862 1 + T C rs114517801 70096880 + 70096860 70096900 41 CGTTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC CGCTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC < 41bp 1 0.548753839690961 1 0.378552049398422 experiment 0.902492320618079 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096880 chr2:70096862 synonymous SNV . 0 3 hm5C_associated_SNPs_3781 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:70096860-70096880
64251 chr2 70096978 70096978 1 + G A rs61756683 70096964 + 70096944 70096984 41 CAGCCATGTAGCGGATCTGTCAGTTTACAGCCTCGAAGGAG CAGCCATGTAGCGGATCTGTCAGTTTACAGCCTCAAAGGAG < 41bp 1 0.376177829723441 1 0.203588545322418 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096964 chr2:70096978 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_3782 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70096897-70096980
64251 chr2 70122254 70122254 1 + G A rs200831065 70122272 + 70122252 70122292 41 CGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG CGAGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG < 41bp 1 0.77199196835131 1 0.508658170700073 experiment 0.456016063297379 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122272 chr2:70122254 synonymous SNV . 0 3 hm5C_associated_SNPs_3783 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:70122223-70122274
64251 chr2 70315987 70315987 1 + C T rs11545482 70315996 + 70315976 70316016 41 TCTGCTGTTCTCCCATGATCCAACTGTGTAATTTCTGGTCA TCTGCTGTTCTTCCATGATCCAACTGTGTAATTTCTGGTCA < 41bp 1 0.452214121223972 1 0.72550356388092 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PCBP1 ENSG00000169564 UTR3 Human protein_coding chr2:70315996 chr2:70315987 . . 0 12 hm5C_associated_SNPs_3784 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:70315881-70316278
64251 chr2 70505162 70505162 1 + C G rs76039898 70505163 + 70505143 70505183 41 CCGGTTTGAAGTACGTGTGCCCATGCCTAAAGCCTTGACTT CCGGTTTGAAGTACGTGTGGCCATGCCTAAAGCCTTGACTT < 41bp 1 0.101266078467869 1 0.0630798041820526 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70505163 chr2:70505162 . . 0 20 hm5C_associated_SNPs_3785 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:70505139-70505165
64251 chr2 70505162 70505162 1 + C G rs76039898 70505164 + 70505144 70505184 41 CGGTTTGAAGTACGTGTGCCCATGCCTAAAGCCTTGACTTT CGGTTTGAAGTACGTGTGGCCATGCCTAAAGCCTTGACTTT < 41bp 1 0.168841671631779 1 0.302183747291565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70505164 chr2:70505162 . . 0 19 hm5C_associated_SNPs_3786 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:70505139-70505165
64251 chr2 70506626 70506626 1 + G T rs117059146 70506615 + 70506595 70506635 41 TATATTTTTACTTATAATACCAATTTAGGCTGGGCGCAGTG TATATTTTTACTTATAATACCAATTTAGGCTTGGCGCAGTG < 41bp 1 0.212352020303568 1 0.163623869419098 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70506615 chr2:70506626 . . 0 32 hm5C_associated_SNPs_3787 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:70506592-70506628
64251 chr2 70506629 70506629 1 + C A rs114392010 70506615 + 70506595 70506635 41 TATATTTTTACTTATAATACCAATTTAGGCTGGGCGCAGTG TATATTTTTACTTATAATACCAATTTAGGCTGGGAGCAGTG < 41bp 1 0.187669873745803 1 0.138414353132248 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70506615 chr2:70506629 . . 0 35 hm5C_associated_SNPs_3788 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:70506592-70506633
64251 chr2 70506630 70506630 1 + G A rs115193128 70506615 + 70506595 70506635 41 TATATTTTTACTTATAATACCAATTTAGGCTGGGCGCAGTG TATATTTTTACTTATAATACCAATTTAGGCTGGGCACAGTG < 41bp 1 0.205998526851484 1 0.124457478523254 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70506615 chr2:70506630 . . 0 36 hm5C_associated_SNPs_3789 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:70506592-70506633
64251 chr2 71297695 71297695 1 + T C rs2287328 71297704 + 71297684 71297724 41 GCAGAAGCAGATGGACTGAGCACAAACCACTGGGTAAAAAC GCAGAAGCAGACGGACTGAGCACAAACCACTGGGTAAAAAC < 41bp 1 0.631106540093751 1 0.358749747276306 experiment 0.737786919812498 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAGK ENSG00000124357 CDS Human protein_coding chr2:71297704 chr2:71297695 synonymous SNV . 0 12 hm5C_associated_SNPs_3791 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:71297625-71297704
64251 chr2 72949093 72949093 1 + A C rs555989698 72949092 + 72949072 72949112 41 ATTTAGTCCACTTCATGCATCAACCTGGCATTGCAGTACCT ATTTAGTCCACTTCATGCATCCACCTGGCATTGCAGTACCT < 41bp 1 0.0275430459634237 1 0.103437662124634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EXOC6B ENSG00000222536 ncRNA_exonic Human snRNA chr2:72949092 chr2:72949093 . . 0 22 hm5C_associated_SNPs_3798 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:72949093-72949113
64251 chr2 72949093 72949093 1 + A C rs555989698 72949095 + 72949075 72949115 41 TAGTCCACTTCATGCATCAACCTGGCATTGCAGTACCTCCA TAGTCCACTTCATGCATCCACCTGGCATTGCAGTACCTCCA < 41bp 1 0.0849598385635879 1 0.209125131368637 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EXOC6B ENSG00000222536 ncRNA_exonic Human snRNA chr2:72949095 chr2:72949093 . . 0 19 hm5C_associated_SNPs_3799 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:72949093-72949113
64251 chr2 72949093 72949093 1 + A C rs555989698 72949096 + 72949076 72949116 41 AGTCCACTTCATGCATCAACCTGGCATTGCAGTACCTCCAG AGTCCACTTCATGCATCCACCTGGCATTGCAGTACCTCCAG < 41bp 1 0.419774308457704 1 0.556536138057709 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EXOC6B ENSG00000222536 ncRNA_exonic Human snRNA chr2:72949096 chr2:72949093 . . 0 18 hm5C_associated_SNPs_3800 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:72949093-72949113
64251 chr2 72949093 72949093 1 + A C rs555989698 72949105 + 72949085 72949125 41 CATGCATCAACCTGGCATTGCAGTACCTCCAGGAATGGTGC CATGCATCCACCTGGCATTGCAGTACCTCCAGGAATGGTGC < 41bp 1 0.200693950882747 1 0.607894957065582 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EXOC6B ENSG00000222536 ncRNA_exonic Human snRNA chr2:72949105 chr2:72949093 . . 0 9 hm5C_associated_SNPs_3801 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:72949093-72949113
64251 chr2 72949093 72949093 1 + A C rs555989698 72949111 + 72949091 72949131 41 TCAACCTGGCATTGCAGTACCTCCAGGAATGGTGCTCTAAT TCCACCTGGCATTGCAGTACCTCCAGGAATGGTGCTCTAAT < 41bp 1 0.340717688170688 1 0.895553529262543 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EXOC6B ENSG00000222536 ncRNA_exonic Human snRNA chr2:72949111 chr2:72949093 . . 0 3 hm5C_associated_SNPs_3802 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:72949093-72949113
64251 chr2 73461483 73461483 1 + C A rs1053329 73461503 + 73461483 73461523 41 CGGGCCGCTGAATAAGCTTCCAAAATGATGGTGAGTGGCGT AGGGCCGCTGAATAAGCTTCCAAAATGATGGTGAGTGGCGT < 41bp 1 0.63649780800897 1 0.75880491733551 experiment 0.72700438398206 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT7 ENSG00000135624 UTR5 Human protein_coding chr2:73461503 chr2:73461483 . . 0 1 hm5C_associated_SNPs_3803 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:73461477-73461504
64251 chr2 73461493 73461493 1 + A C rs550584392 73461503 + 73461483 73461523 41 CGGGCCGCTGAATAAGCTTCCAAAATGATGGTGAGTGGCGT CGGGCCGCTGCATAAGCTTCCAAAATGATGGTGAGTGGCGT < 41bp 1 0.634323703921554 1 0.732730984687805 experiment 0.731352592156891 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT7 ENSG00000135624 UTR5 Human protein_coding chr2:73461503 chr2:73461493 . . 0 11 hm5C_associated_SNPs_3804 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:73461477-73461504
64251 chr2 73476997 73476997 1 + G A rs567536710 73476990 + 73476970 73477010 41 CAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTCGATGCC CAGTGTGAATGCTCTGTCAGCAGATGTACTGGGTCGATGCC < 41bp 1 0.524402991810154 1 0.456431359052658 experiment 0.951194016379691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476990 chr2:73476997 synonymous SNV . 0 28 hm5C_associated_SNPs_3805 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr2 73476997 73476997 1 + G A rs567536710 73477009 + 73476989 73477029 41 GCAGATGTGCTGGGTCGATGCCAGGTGTTTGAAGAGACCCA GCAGATGTACTGGGTCGATGCCAGGTGTTTGAAGAGACCCA < 41bp 1 0.695406351920346 1 0.472182154655457 experiment 0.609187296159308 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477009 chr2:73476997 synonymous SNV . 0 9 hm5C_associated_SNPs_3806 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr2 74154160 74154160 1 + C G rs145252858 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTGTCCATCGAA < 41bp 1 0.681706614196474 1 0.303615063428879 experiment 0.636586771607052 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154160 synonymous SNV . 0 32 hm5C_associated_SNPs_3807 2 0 4 DDX3X POSTAR2 ENCODE chr2:74154023-74154160
64251 chr2 74154160 74154160 1 + C G rs145252858 74154151 + 74154131 74154171 41 CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG CTGCACGCGGGGCGCGGGCCCCGAAGGCTGTCCATCGAAGG < 41bp 1 0.746037454300412 1 0.526952624320984 experiment 0.507925091399176 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154151 chr2:74154160 synonymous SNV . 0 30 hm5C_associated_SNPs_3808 2 0 4 DDX3X POSTAR2 ENCODE chr2:74154023-74154160
64251 chr2 74154160 74154160 1 + C G rs145252858 74154152 + 74154132 74154172 41 TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC TGCACGCGGGGCGCGGGCCCCGAAGGCTGTCCATCGAAGGC < 41bp 1 0.790641637436191 1 0.77873694896698 experiment 0.418716725127618 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154152 chr2:74154160 synonymous SNV . 0 29 hm5C_associated_SNPs_3809 2 0 4 DDX3X POSTAR2 ENCODE chr2:74154023-74154160
64251 chr2 74315082 74315082 1 + C T rs115293949 74315067 + 74315047 74315087 41 CTCATCCTGGCCTGGGAGGGCATTCCCCGTAGCCTCGGAGA CTCATCCTGGCCTGGGAGGGCATTCCCCGTAGCCTTGGAGA < 41bp 1 0.0204266784798798 1 0.0902539789676666 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74315067 chr2:74315082 synonymous SNV . 0 36 hm5C_associated_SNPs_3810 0 0 2 YBX3 POSTAR2 ENCODE chr2:74315026-74315090
64251 chr2 74328125 74328125 1 + C G rs571479182 74328122 + 74328102 74328142 41 TCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCT TCAAGCAAGAGCCAGTAGACCCGGTGACCCAGGCTGAGCCT < 41bp 1 0.388537457624526 1 0.504570364952087 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328122 chr2:74328125 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_3812 0 0 3 EIF3H POSTAR2 ENCODE chr2:74328124-74328146
64251 chr2 74331959 74331959 1 + G A rs7603655 74331942 + 74331922 74331962 41 CCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAGATA CCCAAACAGCCTTGGTTCATCAGTTTCTGCAGTAGGAAATA < 41bp 1 0.206876443756982 1 0.152577489614487 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TET3 ENSG00000187605 UTR3 Human protein_coding chr2:74331942 chr2:74331959 . . 0 38 hm5C_associated_SNPs_3814 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:74331952-74331980
64251 chr2 74756548 74756548 1 - G C rs1183739 74756536 - 74756516 74756556 41 CTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTG CTGCGCCTGTTTCTCGGGATCCACGTCTTCCTGGTCAGCTG < 41bp 1 0.42608100571578 1 0.0935222208499908 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AUP1 ENSG00000115307 CDS Human protein_coding chr2:74756536 chr2:74756548 synonymous SNV . 0 9 hm5C_associated_SNPs_3816 1 0 17 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:74756503-74756565
64251 chr2 85772072 85772072 1 + T C rs571321000 85772091 + 85772071 85772111 41 TTTCTCTCAACACCATGATTCCTTTAACAACATGTTTCCAG TCTCTCTCAACACCATGATTCCTTTAACAACATGTTTCCAG < 41bp 1 0.062953575101282 1 0.0620160400867462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGCX;MAT2A ENSG00000115486;ENSG00000168906 UTR3 Human other chr2:85772091 chr2:85772072 . . 0 2 hm5C_associated_SNPs_3819 0 0 57 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:85772040-85772080
64251 chr2 86360540 86360540 1 + G C rs35016837 86360529 + 86360509 86360549 41 AAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCCTAAA AAGCATTGGATGTGGCCAATCGGCTAGAAGTCATTCCTAAA < 41bp 1 0.545726287826383 1 0.719179630279541 experiment 0.908547424347234 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360529 chr2:86360540 synonymous SNV . 0 32 hm5C_associated_SNPs_3820 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:86360523-86360554
64251 chr2 86363074 86363074 1 + A G rs3770069 86363062 + 86363042 86363082 41 AGCTGAATGTATGTGTTTCTCCTTTGTCCTGCATGTGGCAG AGCTGAATGTATGTGTTTCTCCTTTGTCCTGCGTGTGGCAG < 41bp 1 0.0375481681831253 1 0.0347179174423218 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD94 ENSG00000208772 ncRNA_exonic Human snoRNA chr2:86363062 chr2:86363074 . . 0 33 hm5C_associated_SNPs_3821 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:86362980-86363100
64251 chr2 86363074 86363074 1 + A G rs3770069 86363063 + 86363043 86363083 41 GCTGAATGTATGTGTTTCTCCTTTGTCCTGCATGTGGCAGG GCTGAATGTATGTGTTTCTCCTTTGTCCTGCGTGTGGCAGG < 41bp 1 0.112052872649085 1 0.0235425531864166 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD94 ENSG00000208772 ncRNA_exonic Human snoRNA chr2:86363063 chr2:86363074 . . 0 32 hm5C_associated_SNPs_3822 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:86362980-86363100
64251 chr2 86363074 86363074 1 + A G rs3770069 86363073 + 86363053 86363093 41 TGTGTTTCTCCTTTGTCCTGCATGTGGCAGGCTGATGGGGA TGTGTTTCTCCTTTGTCCTGCGTGTGGCAGGCTGATGGGGA < 41bp 1 0.0563244862397462 1 0.107215017080307 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD94 ENSG00000208772 ncRNA_exonic Human snoRNA chr2:86363073 chr2:86363074 . . 0 22 hm5C_associated_SNPs_3823 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:86362980-86363100
64251 chr2 86438146 86438146 1 + A G rs2241432 86438144 + 86438124 86438164 41 CATTATTTCAAGGATATGTGCCAGGGAATTCAGGAACCACC CATTATTTCAAGGATATGTGCCGGGGAATTCAGGAACCACC < 41bp 1 0.701880022368206 1 0.485408961772919 experiment 0.596239955263588 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86438144 chr2:86438146 . . 0 23 hm5C_associated_SNPs_3824 0 1 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:86438122-86438149
64251 chr2 86439552 86439552 1 + G A rs116387151 86439559 + 86439539 86439579 41 CACTTCTGAGACGGCAAAGCCAACCACTTAGAAGCCTTCCA CACTTCTGAGACGACAAAGCCAACCACTTAGAAGCCTTCCA < 41bp 1 0.455942993251258 1 0.340664386749268 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439559 chr2:86439552 . . 0 14 hm5C_associated_SNPs_3825 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:86439523-86439559
64251 chr2 87000580 87000580 1 + G A rs75434387 87000569 + 87000549 87000589 41 TTTGCAATTTGTAAGTGAAACTGAATCGTGGGTGCATTTCA TTTGCAATTTGTAAGTGAAACTGAATCGTGGATGCATTTCA < 41bp 1 0.2914762793997 1 0.0753350853919983 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5A ENSG00000153561 UTR3 Human protein_coding chr2:87000569 chr2:87000580 . . 0 32 hm5C_associated_SNPs_3826 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:87000516-87000604
64251 chr2 87003023 87003023 1 + A G rs566048242 87003036 + 87003016 87003056 41 CAACCCTATCATCGCTGATGCTTTCTGCATGTCAGCAGTCC CAACCCTGTCATCGCTGATGCTTTCTGCATGTCAGCAGTCC < 41bp 1 0.0612288393924631 1 0.0276375114917755 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5A ENSG00000153561 UTR3 Human protein_coding chr2:87003036 chr2:87003023 . . 0 8 hm5C_associated_SNPs_3827 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:87002967-87003023
64251 chr2 87003028 87003028 1 + C T rs1049457 87003036 + 87003016 87003056 41 CAACCCTATCATCGCTGATGCTTTCTGCATGTCAGCAGTCC CAACCCTATCATTGCTGATGCTTTCTGCATGTCAGCAGTCC < 41bp 1 0.0560056785345791 1 0.0142485499382019 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5A ENSG00000153561 UTR3 Human protein_coding chr2:87003036 chr2:87003028 . . 0 13 hm5C_associated_SNPs_3828 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:87003017-87003038
64251 chr2 97464936 97464936 1 + G A rs36121810 97464916 + 97464896 97464936 41 AGTACTACGCCCGCCATTACCTGTACACCCGAAATAAGCCG AGTACTACGCCCGCCATTACCTGTACACCCGAAATAAGCCA < 41bp 1 0.616429315216641 1 0.754606962203979 experiment 0.767141369566718 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97464916 chr2:97464936 synonymous SNV . 0 41 hm5C_associated_SNPs_3832 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:97464933-97464960
64251 chr2 98263883 98263883 1 + A G rs75630766 98263871 + 98263851 98263891 41 GGAAGACCCTAATTTAGTCCCCTCCATCTCCAACAAGAGAA GGAAGACCCTAATTTAGTCCCCTCCATCTCCAGCAAGAGAA < 41bp 1 0.0443388574118148 1 0.0885582566261292 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263871 chr2:98263883 nonsynonymous SNV 0.294 0 33 hm5C_associated_SNPs_3834 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:98263855-98263887
64251 chr2 98263883 98263883 1 + A G rs75630766 98263872 + 98263852 98263892 41 GAAGACCCTAATTTAGTCCCCTCCATCTCCAACAAGAGAAT GAAGACCCTAATTTAGTCCCCTCCATCTCCAGCAAGAGAAT < 41bp 1 0.644201224393914 1 0.640792608261108 experiment 0.711597551212172 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263872 chr2:98263883 nonsynonymous SNV 0.294 0 32 hm5C_associated_SNPs_3835 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:98263855-98263887
64251 chr2 99061362 99061362 1 + G C rs140476409 99061382 + 99061362 99061402 41 GAGGGTTCGCTGCTGGTTTGCCGCCGGGTCGGGCTCCGTGG CAGGGTTCGCTGCTGGTTTGCCGCCGGGTCGGGCTCCGTGG < 41bp 1 0.397185518931488 1 0.297911822795868 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 UTR5 Human protein_coding chr2:99061382 chr2:99061362 . . 0 1 hm5C_associated_SNPs_3836 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:99061357-99061388
64251 chr2 99061374 99061374 1 + C G rs573103838 99061382 + 99061362 99061402 41 GAGGGTTCGCTGCTGGTTTGCCGCCGGGTCGGGCTCCGTGG GAGGGTTCGCTGGTGGTTTGCCGCCGGGTCGGGCTCCGTGG < 41bp 1 0.473788228288511 1 0.391899615526199 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 UTR5 Human protein_coding chr2:99061382 chr2:99061374 . . 0 13 hm5C_associated_SNPs_3837 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:99061357-99061388
64251 chr2 99179971 99179971 1 + C A rs61748143 99179968 + 99179948 99179988 41 TACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGAT TACCCGCTGCTGACCACTCTCACAGACTGCGTGGCCATGAT < 41bp 1 0.595118587858852 1 0.19342052936554 experiment 0.809762824282295 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99179968 chr2:99179971 synonymous SNV . 0 24 hm5C_associated_SNPs_3838 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr2:99179971-99179993
64251 chr2 99802650 99802650 1 + G A rs150171730 99802640 + 99802620 99802660 41 CTACTTCCTACTTCCCACAGCCTCTAAAGAGAGCAATCACT CTACTTCCTACTTCCCACAGCCTCTAAAGAAAGCAATCACT < 41bp 1 0.0904324890256116 1 0.154283165931702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL30 ENSG00000241962 CDS Human protein_coding chr2:99802640 chr2:99802650 nonsynonymous SNV . 0 31 hm5C_associated_SNPs_3855 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:99802640-99802660
64251 chr2 99813907 99813907 1 + T C rs537150360 99813899 + 99813879 99813919 41 ATAAATAAGCTTAAAGGCAACTGCAGTTTTAATTCCATAGT ATAAATAAGCTTAAAGGCAACTGCAGTTCTAATTCCATAGT < 41bp 1 0.746596497551825 1 0.187035292387009 experiment 0.50680700489635 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPL30 ENSG00000185414;ENSG00000241962 UTR3 Human other chr2:99813899 chr2:99813907 . . 0 29 hm5C_associated_SNPs_3856 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:99813850-99813908
64251 chr2 99953884 99953884 1 + C G rs370609784 99953866 + 99953846 99953886 41 GAACTCACACCATATGTGTCCTGTTCCAGTGCGCGGGTCTG GAACTCACACCATATGTGTCCTGTTCCAGTGCGCGGGTGTG < 41bp 1 0.323317658665628 1 0.0333932936191559 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 UTR5 Human protein_coding chr2:99953866 chr2:99953884 . . 0 39 hm5C_associated_SNPs_3857 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:99953857-99953885
64251 chr2 99985866 99985866 1 + A C rs147438767 99985879 + 99985859 99985899 41 TGAATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAAC TGAATCACTGGAATTATGTGCTGCTGTAGAAGTTATGGAAC < 41bp 1 0.410411186817719 1 0.36541673541069 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985879 chr2:99985866 nonsynonymous SNV 0.876 0 8 hm5C_associated_SNPs_3858 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985866 99985866 1 + A C rs147438767 99985882 + 99985862 99985902 41 ATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAACAAG ATCACTGGAATTATGTGCTGCTGTAGAAGTTATGGAACAAG < 41bp 1 0.313389731619183 1 0.389966666698456 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985882 chr2:99985866 nonsynonymous SNV 0.876 0 5 hm5C_associated_SNPs_3859 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 101188227 101188227 1 + C G rs143476375 101188212 + 101188192 101188232 41 TGGAAGGAGATATCAAGGCTCAGTTTATTGGTCCTCTGGTG TGGAAGGAGATATCAAGGCTCAGTTTATTGGTCCTGTGGTG < 41bp 1 0.385176660080881 1 0.480477631092072 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101188212 chr2:101188227 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_3860 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101188214-101188255
64251 chr2 101869588 101869588 1 + G A rs2272320 101869594 + 101869574 101869614 41 GGGAGCGGAGGCCCGGGGGGCCCCGCGGGCAGGATGAGCTT GGGAGCGGAGGCCCAGGGGGCCCCGCGGGCAGGATGAGCTT < 41bp 1 0.745297951607208 1 0.301174491643906 experiment 0.509404096785584 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101869594 chr2:101869588 synonymous SNV . 0 15 hm5C_associated_SNPs_3862 0 0 4 DDX3X POSTAR2 ENCODE chr2:101869560-101869604
64251 chr2 101869588 101869588 1 + G A rs2272320 101869595 + 101869575 101869615 41 GGAGCGGAGGCCCGGGGGGCCCCGCGGGCAGGATGAGCTTG GGAGCGGAGGCCCAGGGGGCCCCGCGGGCAGGATGAGCTTG < 41bp 1 0.727134498232093 1 0.410992830991745 experiment 0.545731003535813 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101869595 chr2:101869588 synonymous SNV . 0 14 hm5C_associated_SNPs_3863 0 0 4 DDX3X POSTAR2 ENCODE chr2:101869560-101869604
64251 chr2 101869600 101869600 1 + G A rs529290190 101869594 + 101869574 101869614 41 GGGAGCGGAGGCCCGGGGGGCCCCGCGGGCAGGATGAGCTT GGGAGCGGAGGCCCGGGGGGCCCCGCAGGCAGGATGAGCTT < 41bp 1 0.749118767042457 1 0.338516771793365 experiment 0.501762465915086 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101869594 chr2:101869600 synonymous SNV . 0 27 hm5C_associated_SNPs_3864 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:101869600-101869620
64251 chr2 101869600 101869600 1 + G A rs529290190 101869595 + 101869575 101869615 41 GGAGCGGAGGCCCGGGGGGCCCCGCGGGCAGGATGAGCTTG GGAGCGGAGGCCCGGGGGGCCCCGCAGGCAGGATGAGCTTG < 41bp 1 0.720081680860946 1 0.307549357414246 experiment 0.559836638278109 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CNOT11 ENSG00000158435 CDS Human protein_coding chr2:101869595 chr2:101869600 synonymous SNV . 0 26 hm5C_associated_SNPs_3865 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:101869600-101869620
64251 chr2 101886623 101886623 1 + C T rs149754769 101886611 + 101886591 101886631 41 TTTGTTTTAAGGAAAAATATCAGTCAGTGCTCCGGGAGGTA TTTGTTTTAAGGAAAAATATCAGTCAGTGCTCTGGGAGGTA < 41bp 1 0.378223539769423 1 0.25662487745285 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886611 chr2:101886623 . . 0 33 hm5C_associated_SNPs_3866 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:101886561-101886759
64251 chr2 101886624 101886624 1 + G A rs368378746 101886611 + 101886591 101886631 41 TTTGTTTTAAGGAAAAATATCAGTCAGTGCTCCGGGAGGTA TTTGTTTTAAGGAAAAATATCAGTCAGTGCTCCAGGAGGTA < 41bp 1 0.363694950191835 1 0.19366642832756 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CNOT11 ENSG00000158435 UTR3 Human protein_coding chr2:101886611 chr2:101886624 . . 0 34 hm5C_associated_SNPs_3867 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:101886561-101886759
64251 chr2 102441807 102441807 1 + G A rs61742467 102441795 + 102441775 102441815 41 CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGGTCCATTAC CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGATCCATTAC < 41bp 1 0.3586281114748 1 0.26985490322113 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102441795 chr2:102441807 synonymous SNV . 0 33 hm5C_associated_SNPs_3868 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:102441788-102441878
64251 chr2 102486847 102486847 1 + A G rs201882230 102486859 + 102486839 102486879 41 ATGACCCCATCCAAGGAGGGCACTCTAATCGTCCGCCAGGT ATGACCCCGTCCAAGGAGGGCACTCTAATCGTCCGCCAGGT < 41bp 1 0.131123792170393 1 0.0748676955699921 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486859 chr2:102486847 synonymous SNV . 0 9 hm5C_associated_SNPs_3869 0 0 5 GRWD1 POSTAR2 ENCODE chr2:102486815-102486853
64251 chr2 102509661 102509661 1 + C G rs138836144 102509670 + 102509650 102509690 41 ATCTGGTAAGACAAGTACATCCACTCATGAATGCAGACACA ATCTGGTAAGAGAAGTACATCCACTCATGAATGCAGACACA < 41bp 1 0.254604387366373 1 0.0493995547294617 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP4K4 ENSG00000233404 CDS Human other chr2:102509670 chr2:102509661 nonsynonymous SNV . 0 12 hm5C_associated_SNPs_3870 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:102509642-102509673
64251 chr2 102509667 102509667 1 + C T rs141957396 102509670 + 102509650 102509690 41 ATCTGGTAAGACAAGTACATCCACTCATGAATGCAGACACA ATCTGGTAAGACAAGTATATCCACTCATGAATGCAGACACA < 41bp 1 0.32204686183995 1 0.0266952514648438 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP4K4 ENSG00000233404 CDS Human other chr2:102509670 chr2:102509667 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_3871 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:102509642-102509673
64251 chr2 105472851 105472851 1 + G A rs577550493 105472862 + 105472842 105472882 41 CCGCACCACGGCGGCGGCGGCGGCGGCGCGGGGCCTGGACT CCGCACCACAGCGGCGGCGGCGGCGGCGCGGGGCCTGGACT < 41bp 1 0.758354951094393 1 0.906382203102112 experiment 0.483290097811215 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F3 ENSG00000198914 CDS Human protein_coding chr2:105472862 chr2:105472851 nonsynonymous SNV 0.998 1 10 hm5C_associated_SNPs_3872 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:105472848-105472883
64251 chr2 105959575 105959575 1 + T C rs35535744 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGACTTAACGCACAGGAAAAGTCCTTCAGGC < 41bp 1 0.743986712634269 1 0.448568344116211 experiment 0.512026574731462 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959575 synonymous SNV . 0 23 hm5C_associated_SNPs_3873 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:105959539-105959577
64251 chr2 105959592 105959592 1 + G A rs28930676 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGAC < 41bp 1 0.498618670182908 1 0.500356495380402 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959592 nonsynonymous SNV 0.626 0 40 hm5C_associated_SNPs_3874 0 0 2 UCHL5 POSTAR2 ENCODE chr2:105959589-105959683
64251 chr2 109336004 109336004 1 + C T rs552611730 109336007 + 109335987 109336027 41 TTTCCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTG TTTCCTCTTGGAAGTGGTGACTGCTGCGGGCCTGAGCGCTG < 41bp 1 0.616499708738975 1 0.197483658790588 experiment 0.76700058252205 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336007 chr2:109336004 . . 0 18 hm5C_associated_SNPs_3875 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109336004 109336004 1 + C T rs552611730 109336010 + 109335990 109336030 41 CCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTGGTC CCTCTTGGAAGTGGTGACTGCTGCGGGCCTGAGCGCTGGTC < 41bp 1 0.750618964968305 1 0.516751289367676 experiment 0.498762070063389 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336010 chr2:109336004 . . 0 15 hm5C_associated_SNPs_3876 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109336018 109336018 1 + C T rs79379002 109336007 + 109335987 109336027 41 TTTCCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTG TTTCCTCTTGGAAGTGGCGACTGCTGCGGGCTTGAGCGCTG < 41bp 1 0.570064120573613 1 0.234519928693771 experiment 0.859871758852773 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336007 chr2:109336018 . . 0 32 hm5C_associated_SNPs_3877 1 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109336018 109336018 1 + C T rs79379002 109336010 + 109335990 109336030 41 CCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTGGTC CCTCTTGGAAGTGGCGACTGCTGCGGGCTTGAGCGCTGGTC < 41bp 1 0.754590307810253 1 0.616027235984802 experiment 0.490819384379493 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336010 chr2:109336018 . . 0 29 hm5C_associated_SNPs_3878 1 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109336022 109336022 1 + G C rs372373398 109336007 + 109335987 109336027 41 TTTCCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTG TTTCCTCTTGGAAGTGGCGACTGCTGCGGGCCTGACCGCTG < 41bp 1 0.584919379663127 1 0.259298980236053 experiment 0.830161240673747 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336007 chr2:109336022 . . 0 36 hm5C_associated_SNPs_3879 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109336022 109336022 1 + G C rs372373398 109336010 + 109335990 109336030 41 CCTCTTGGAAGTGGCGACTGCTGCGGGCCTGAGCGCTGGTC CCTCTTGGAAGTGGCGACTGCTGCGGGCCTGACCGCTGGTC < 41bp 1 0.774104251972003 1 0.669861018657684 experiment 0.451791496055993 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RANBP2 ENSG00000153201 UTR5 Human protein_coding chr2:109336010 chr2:109336022 . . 0 33 hm5C_associated_SNPs_3880 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109335979-109336028
64251 chr2 109347314 109347314 1 + C G rs144278795 109347326 + 109347306 109347346 41 GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG GAAGAAAAGACAGACAAAGCCGTTGAATGTTACAGGGTAAG < 41bp 1 0.0892077162620879 1 0.212608277797699 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347326 chr2:109347314 nonsynonymous SNV 0.838 1 9 hm5C_associated_SNPs_3881 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109347298-109347338
64251 chr2 113277949 113277949 1 + T C rs62157538 113277937 + 113277917 113277957 41 TTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGCT TTCCAGCTCTTCGGCTTTGACTTCATGGTCGACGAGGAGCT < 41bp 1 0.79438931103085 1 0.770487606525421 experiment 0.4112213779383 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113277937 chr2:113277949 synonymous SNV . 0 33 hm5C_associated_SNPs_3890 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113277930-113277960
64251 chr2 113322014 113322014 1 + A G rs114717734 113321998 + 113321978 113322018 41 TACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGT TACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCGTGGT < 41bp 1 0.167237447952419 1 0.31479686498642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321998 chr2:113322014 nonsynonymous SNV 0.988 0 37 hm5C_associated_SNPs_3891 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr2 113322014 113322014 1 + A G rs114717734 113321999 + 113321979 113322019 41 ACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTT ACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCGTGGTT < 41bp 1 0.663114503239659 1 0.213825136423111 experiment 0.673770993520681 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321999 chr2:113322014 nonsynonymous SNV 0.988 0 36 hm5C_associated_SNPs_3892 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr2 114353068 114353068 1 + C G rs547041230 114353059 + 114353039 114353079 41 CCCCGCCACAGGATCCAGAGCAAGCACCGCCCCCTGGACGA CCCCGCCACAGGATCCAGAGCAAGCACCGGCCCCTGGACGA < 41bp 1 0.486353470229803 1 0.715253114700317 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114353059 chr2:114353068 . . 0 30 hm5C_associated_SNPs_3894 0 0 1 PPIG POSTAR2 ENCODE chr2:114353046-114353090
64251 chr2 114354007 114354007 1 + T C rs563299979 114354015 + 114353995 114354035 41 AGGTGCCTGAGATTGATGTTCCATCCTACCTGCCTGACCTG AGGTGCCTGAGACTGATGTTCCATCCTACCTGCCTGACCTG < 41bp 1 0.0392169703145041 1 0.150279998779297 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114354015 chr2:114354007 . . 0 13 hm5C_associated_SNPs_3895 0 0 2 PPIG POSTAR2 ENCODE chr2:114353970-114354053
64251 chr2 114354007 114354007 1 + T C rs563299979 114354016 + 114353996 114354036 41 GGTGCCTGAGATTGATGTTCCATCCTACCTGCCTGACCTGC GGTGCCTGAGACTGATGTTCCATCCTACCTGCCTGACCTGC < 41bp 1 0.11734782167533 1 0.277384161949158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114354016 chr2:114354007 . . 0 12 hm5C_associated_SNPs_3896 0 0 2 PPIG POSTAR2 ENCODE chr2:114353970-114354053
64251 chr2 114400504 114400504 1 + C T rs793065 114400488 + 114400468 114400508 41 GCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCCAATC GCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCTAATC < 41bp 1 0.482051021162159 1 0.115061432123184 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400488 chr2:114400504 . . 0 37 hm5C_associated_SNPs_3907 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400489 + 114400469 114400509 41 CTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCCAATCA CTGGGATTACAGGCATGAGCCACCGCGCCCGGCCCTAATCA < 41bp 1 0.74436754262701 1 0.689399600028992 experiment 0.511264914745981 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400489 chr2:114400504 . . 0 36 hm5C_associated_SNPs_3908 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400491 + 114400471 114400511 41 GGGATTACAGGCATGAGCCACCGCGCCCGGCCCCAATCATC GGGATTACAGGCATGAGCCACCGCGCCCGGCCCTAATCATC < 41bp 1 0.409205314582008 1 0.516590237617493 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400491 chr2:114400504 . . 0 34 hm5C_associated_SNPs_3909 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400492 + 114400472 114400512 41 GGATTACAGGCATGAGCCACCGCGCCCGGCCCCAATCATCT GGATTACAGGCATGAGCCACCGCGCCCGGCCCTAATCATCT < 41bp 1 0.601916540727588 1 0.243960201740265 experiment 0.796166918544824 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400492 chr2:114400504 . . 0 33 hm5C_associated_SNPs_3910 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400494 + 114400474 114400514 41 ATTACAGGCATGAGCCACCGCGCCCGGCCCCAATCATCTGT ATTACAGGCATGAGCCACCGCGCCCGGCCCTAATCATCTGT < 41bp 1 0.573288366388141 1 0.607640504837036 experiment 0.853423267223719 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400494 chr2:114400504 . . 0 31 hm5C_associated_SNPs_3911 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400496 + 114400476 114400516 41 TACAGGCATGAGCCACCGCGCCCGGCCCCAATCATCTGTTT TACAGGCATGAGCCACCGCGCCCGGCCCTAATCATCTGTTT < 41bp 1 0.586418937308399 1 0.136337161064148 experiment 0.827162125383202 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400496 chr2:114400504 . . 0 29 hm5C_associated_SNPs_3912 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400497 + 114400477 114400517 41 ACAGGCATGAGCCACCGCGCCCGGCCCCAATCATCTGTTTT ACAGGCATGAGCCACCGCGCCCGGCCCTAATCATCTGTTTT < 41bp 1 0.234405864953529 1 0.127327919006348 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400497 chr2:114400504 . . 0 28 hm5C_associated_SNPs_3913 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 114400504 114400504 1 + C T rs793065 114400498 + 114400478 114400518 41 CAGGCATGAGCCACCGCGCCCGGCCCCAATCATCTGTTTTT CAGGCATGAGCCACCGCGCCCGGCCCTAATCATCTGTTTTT < 41bp 1 0.440035419420122 1 0.0924329161643982 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABL2A ENSG00000144134 UTR3 Human protein_coding chr2:114400498 chr2:114400504 . . 0 27 hm5C_associated_SNPs_3914 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114400504-114400562
64251 chr2 118579599 118579599 1 + A G rs149582535 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCGTTGTGGCCACACCAGGCCGTCTGCTGGACCAT < 41bp 1 0.596170549886525 1 0.160119384527206 experiment 0.807658900226949 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579599 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_3915 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579554-118579619
64251 chr2 118582611 118582611 1 + T C rs61732821 118582619 + 118582599 118582639 41 CTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGT CTTCTTTTCATCCTGTATGTCTGTGAAATACCACTATGAGT < 41bp 1 0.396937142600262 1 0.371124863624573 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582619 chr2:118582611 synonymous SNV . 0 13 hm5C_associated_SNPs_3916 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:118582593-118582625
64251 chr2 118866963 118866963 1 + C A rs1486116 118866953 + 118866933 118866973 41 GTCTTGGGGGTGGATGAATACATAATTTCTCATGTATTCGT GTCTTGGGGGTGGATGAATACATAATTTCTAATGTATTCGT < 41bp 1 0.703147251656057 1 0.142694026231766 experiment 0.593705496687886 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INSIG2 ENSG00000125629 UTR3 Human protein_coding chr2:118866953 chr2:118866963 . . 0 31 hm5C_associated_SNPs_3917 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr2:118866952-118866973
64251 chr2 120005521 120005521 1 + C T rs147804223 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCTGTGGTCAAC < 41bp 1 0.332023992105085 1 0.0215213298797607 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005521 synonymous SNV . 0 32 hm5C_associated_SNPs_3919 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr2 120436833 120436833 1 + C G rs542243250 120436835 + 120436815 120436855 41 CGAGCGGGAGGGACCCTTCTCCGGCCTGATGCGACCCGGTA CGAGCGGGAGGGACCCTTGTCCGGCCTGATGCGACCCGGTA < 41bp 1 0.471999911330262 1 0.750213265419006 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TMEM177 ENSG00000144120 UTR5 Human protein_coding chr2:120436835 chr2:120436833 . . 0 19 hm5C_associated_SNPs_3931 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:120436781-120436842
64251 chr2 120439459 120439459 1 + C A rs4849797 120439440 + 120439420 120439460 41 TCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCACG TCTGGAGGGCCCTGTTGGAGCCTTTGGACCTATAGCTCAAG < 41bp 1 0.0210367735726227 1 0.05145263671875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM177 ENSG00000144120 UTR3 Human protein_coding chr2:120439440 chr2:120439459 . . 0 40 hm5C_associated_SNPs_3932 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:120439400-120439460
64251 chr2 122288478 122288478 1 + C A rs144448852 122288487 + 122288467 122288507 41 TCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGG TCTTGGGGTTGAGCTACTGTCCAATGAGCGCATAGTGAGGG < 41bp 1 0.573113756115221 1 0.147417515516281 experiment 0.853772487769557 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288487 chr2:122288478 . . 0 12 hm5C_associated_SNPs_3933 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288478 122288478 1 + C A rs144448852 122288497 + 122288477 122288517 41 GCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCT GAGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCT < 41bp 1 0.470826118182216 1 0.150676608085632 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288497 chr2:122288478 . . 0 2 hm5C_associated_SNPs_3934 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288496 122288496 1 + G A rs77516008 122288487 + 122288467 122288507 41 TCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGG TCTTGGGGTTGCGCTACTGTCCAATGAGCACATAGTGAGGG < 41bp 1 0.59259592327537 1 0.215417236089706 experiment 0.81480815344926 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288487 chr2:122288496 . . 0 30 hm5C_associated_SNPs_3935 0 0 65 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288496 122288496 1 + G A rs77516008 122288497 + 122288477 122288517 41 GCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCT GCGCTACTGTCCAATGAGCACATAGTGAGGGCAGTACTGCT < 41bp 1 0.530950084183628 1 0.0599301159381866 experiment 0.938099831632744 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288497 chr2:122288496 . . 0 20 hm5C_associated_SNPs_3936 0 0 65 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288496 122288496 1 + G A rs77516008 122288513 + 122288493 122288533 41 AGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC AGCACATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC < 41bp 1 0.790963236930632 1 0.181829214096069 experiment 0.418073526138736 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288513 chr2:122288496 . . 0 4 hm5C_associated_SNPs_3937 0 0 65 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288496 122288496 1 + G A rs77516008 122288516 + 122288496 122288536 41 GCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC ACATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC < 41bp 1 0.463061378404842 1 0.45443657040596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288516 chr2:122288496 . . 0 1 hm5C_associated_SNPs_3938 0 0 65 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288498 122288498 1 + A C rs553096682 122288487 + 122288467 122288507 41 TCTTGGGGTTGCGCTACTGTCCAATGAGCGCATAGTGAGGG TCTTGGGGTTGCGCTACTGTCCAATGAGCGCCTAGTGAGGG < 41bp 1 0.60320479549753 1 0.20080292224884 experiment 0.793590409004941 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288487 chr2:122288498 . . 0 32 hm5C_associated_SNPs_3939 0 0 68 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288498 122288498 1 + A C rs553096682 122288497 + 122288477 122288517 41 GCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCT GCGCTACTGTCCAATGAGCGCCTAGTGAGGGCAGTACTGCT < 41bp 1 0.277141527310975 1 0.15103805065155 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288497 chr2:122288498 . . 0 22 hm5C_associated_SNPs_3940 0 0 68 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288498 122288498 1 + A C rs553096682 122288513 + 122288493 122288533 41 AGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC AGCGCCTAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC < 41bp 1 0.781234788440497 1 0.261269629001617 experiment 0.437530423119006 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288513 chr2:122288498 . . 0 6 hm5C_associated_SNPs_3941 0 0 68 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288498 122288498 1 + A C rs553096682 122288516 + 122288496 122288536 41 GCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC GCCTAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC < 41bp 1 0.475178205426417 1 0.456931978464127 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288516 chr2:122288498 . . 0 3 hm5C_associated_SNPs_3942 0 0 68 PTBP1 POSTAR2 GSE57278,GSM1486178 chr2:122288440-122288520
64251 chr2 122288513 122288513 1 + C G rs115435830 122288497 + 122288477 122288517 41 GCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTACTGCT GCGCTACTGTCCAATGAGCGCATAGTGAGGGCAGTAGTGCT < 41bp 1 0.529012924576979 1 0.127527832984924 experiment 0.941974150846042 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288497 chr2:122288513 . . 0 37 hm5C_associated_SNPs_3943 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288513 122288513 1 + C G rs115435830 122288516 + 122288496 122288536 41 GCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC GCATAGTGAGGGCAGTAGTGCTAACGCCTGAACAACACACC < 41bp 1 0.483935720706506 1 0.341999351978302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288516 chr2:122288513 . . 0 18 hm5C_associated_SNPs_3944 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288513 122288513 1 + C G rs115435830 122288528 + 122288508 122288548 41 CAGTACTGCTAACGCCTGAACAACACACCCGCATCAACTAG CAGTAGTGCTAACGCCTGAACAACACACCCGCATCAACTAG < 41bp 1 0.795122693799508 1 0.311364769935608 experiment 0.409754612400984 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288528 chr2:122288513 . . 0 6 hm5C_associated_SNPs_3945 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288513 122288513 1 + C G rs115435830 122288531 + 122288511 122288551 41 TACTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGC TAGTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGC < 41bp 1 0.223601562035268 1 0.139378756284714 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288531 chr2:122288513 . . 0 3 hm5C_associated_SNPs_3946 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288513 122288513 1 + C G rs115435830 122288533 + 122288513 122288553 41 CTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGCTT GTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGCTT < 41bp 1 0.595329686270952 1 0.13052225112915 experiment 0.809340627458097 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288533 chr2:122288513 . . 0 1 hm5C_associated_SNPs_3947 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288513 + 122288493 122288533 41 AGCGCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACAC AGCGCATAGTGAGGGCAGTACTGCTAACGCGTGAACAACAC < 41bp 1 0.779693738657518 1 0.260354042053223 experiment 0.440612522684965 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288513 chr2:122288523 . . 0 31 hm5C_associated_SNPs_3948 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288516 + 122288496 122288536 41 GCATAGTGAGGGCAGTACTGCTAACGCCTGAACAACACACC GCATAGTGAGGGCAGTACTGCTAACGCGTGAACAACACACC < 41bp 1 0.512019243427829 1 0.424452543258667 experiment 0.975961513144342 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288516 chr2:122288523 . . 0 28 hm5C_associated_SNPs_3949 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288531 + 122288511 122288551 41 TACTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGC TACTGCTAACGCGTGAACAACACACCCGCATCAACTAGAGC < 41bp 1 0.250080111523557 1 0.166049599647522 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288531 chr2:122288523 . . 0 13 hm5C_associated_SNPs_3950 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288533 + 122288513 122288553 41 CTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGCTT CTGCTAACGCGTGAACAACACACCCGCATCAACTAGAGCTT < 41bp 1 0.589496468553289 1 0.11561906337738 experiment 0.821007062893422 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288533 chr2:122288523 . . 0 11 hm5C_associated_SNPs_3951 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288536 + 122288516 122288556 41 CTAACGCCTGAACAACACACCCGCATCAACTAGAGCTTTTG CTAACGCGTGAACAACACACCCGCATCAACTAGAGCTTTTG < 41bp 1 0.597706634731155 1 0.0748287439346313 experiment 0.80458673053769 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288536 chr2:122288523 . . 0 8 hm5C_associated_SNPs_3952 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288523 122288523 1 + C G rs191916413 122288542 + 122288522 122288562 41 CCTGAACAACACACCCGCATCAACTAGAGCTTTTGCTTTAT CGTGAACAACACACCCGCATCAACTAGAGCTTTTGCTTTAT < 41bp 1 0.348754054639905 1 0.237081527709961 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288542 chr2:122288523 . . 0 2 hm5C_associated_SNPs_3953 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122288503-122288525
64251 chr2 122288538 122288538 1 + G A rs187757075 122288531 + 122288511 122288551 41 TACTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGC TACTGCTAACGCCTGAACAACACACCCACATCAACTAGAGC < 41bp 1 0.204596422798313 1 0.24670997262001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288531 chr2:122288538 . . 0 28 hm5C_associated_SNPs_3954 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:122288440-122288580
64251 chr2 122288538 122288538 1 + G A rs187757075 122288533 + 122288513 122288553 41 CTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGCTT CTGCTAACGCCTGAACAACACACCCACATCAACTAGAGCTT < 41bp 1 0.497167257967621 1 0.157486528158188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288533 chr2:122288538 . . 0 26 hm5C_associated_SNPs_3955 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:122288440-122288580
64251 chr2 122288538 122288538 1 + G A rs187757075 122288536 + 122288516 122288556 41 CTAACGCCTGAACAACACACCCGCATCAACTAGAGCTTTTG CTAACGCCTGAACAACACACCCACATCAACTAGAGCTTTTG < 41bp 1 0.404672803968355 1 0.0645059645175934 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288536 chr2:122288538 . . 0 23 hm5C_associated_SNPs_3956 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:122288440-122288580
64251 chr2 122288538 122288538 1 + G A rs187757075 122288542 + 122288522 122288562 41 CCTGAACAACACACCCGCATCAACTAGAGCTTTTGCTTTAT CCTGAACAACACACCCACATCAACTAGAGCTTTTGCTTTAT < 41bp 1 0.416091843414039 1 0.219101130962372 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288542 chr2:122288538 . . 0 17 hm5C_associated_SNPs_3957 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr2:122288440-122288580
64251 chr2 122288548 122288548 1 + G A rs367638364 122288528 + 122288508 122288548 41 CAGTACTGCTAACGCCTGAACAACACACCCGCATCAACTAG CAGTACTGCTAACGCCTGAACAACACACCCGCATCAACTAA < 41bp 1 0.775867285415695 1 0.388536602258682 experiment 0.448265429168609 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288528 chr2:122288548 . . 0 41 hm5C_associated_SNPs_3958 0 0 95 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288548 122288548 1 + G A rs367638364 122288531 + 122288511 122288551 41 TACTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGC TACTGCTAACGCCTGAACAACACACCCGCATCAACTAAAGC < 41bp 1 0.213342240728392 1 0.158886969089508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288531 chr2:122288548 . . 0 38 hm5C_associated_SNPs_3959 0 0 95 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288548 122288548 1 + G A rs367638364 122288533 + 122288513 122288553 41 CTGCTAACGCCTGAACAACACACCCGCATCAACTAGAGCTT CTGCTAACGCCTGAACAACACACCCGCATCAACTAAAGCTT < 41bp 1 0.550006974220845 1 0.120516300201416 experiment 0.89998605155831 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288533 chr2:122288548 . . 0 36 hm5C_associated_SNPs_3960 0 0 95 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288548 122288548 1 + G A rs367638364 122288536 + 122288516 122288556 41 CTAACGCCTGAACAACACACCCGCATCAACTAGAGCTTTTG CTAACGCCTGAACAACACACCCGCATCAACTAAAGCTTTTG < 41bp 1 0.540863710602094 1 0.106298059225082 experiment 0.918272578795811 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288536 chr2:122288548 . . 0 33 hm5C_associated_SNPs_3961 0 0 95 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288548 122288548 1 + G A rs367638364 122288542 + 122288522 122288562 41 CCTGAACAACACACCCGCATCAACTAGAGCTTTTGCTTTAT CCTGAACAACACACCCGCATCAACTAAAGCTTTTGCTTTAT < 41bp 1 0.371872256339966 1 0.234562963247299 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288542 chr2:122288548 . . 0 27 hm5C_associated_SNPs_3962 0 0 95 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288554 122288554 1 + T C rs145446412 122288536 + 122288516 122288556 41 CTAACGCCTGAACAACACACCCGCATCAACTAGAGCTTTTG CTAACGCCTGAACAACACACCCGCATCAACTAGAGCTTCTG < 41bp 1 0.56495780785429 1 0.072864294052124 experiment 0.870084384291419 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288536 chr2:122288554 . . 0 39 hm5C_associated_SNPs_3963 0 0 96 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288554 122288554 1 + T C rs145446412 122288542 + 122288522 122288562 41 CCTGAACAACACACCCGCATCAACTAGAGCTTTTGCTTTAT CCTGAACAACACACCCGCATCAACTAGAGCTTCTGCTTTAT < 41bp 1 0.363404051946429 1 0.110762536525726 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288542 chr2:122288554 . . 0 33 hm5C_associated_SNPs_3964 0 0 96 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 122288554 122288554 1 + T C rs145446412 122288570 + 122288550 122288590 41 GCTTTTGCTTTATTTTGGTGCAATTTTTGGAAAAATGAAAA GCTTCTGCTTTATTTTGGTGCAATTTTTGGAAAAATGAAAA < 41bp 1 0.106780404343198 1 0.0839719474315643 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU4ATAC ENSG00000264229 ncRNA_exonic Human snRNA chr2:122288570 chr2:122288554 . . 0 5 hm5C_associated_SNPs_3965 0 0 96 PTBP1 POSTAR2 GSE19323,GSM480476 chr2:122288541-122288562
64251 chr2 127453579 127453579 1 + A G rs115178969 127453565 + 127453545 127453585 41 GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTA GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTGCATGTA < 41bp 1 0.735686872368883 1 0.330038160085678 experiment 0.528626255262235 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GYPC ENSG00000136732 CDS Human protein_coding chr2:127453565 chr2:127453579 nonsynonymous SNV 0.094 3 35 hm5C_associated_SNPs_3968 0 0 4 LIN28B POSTAR2 ENCODE chr2:127453569-127453586
64251 chr2 128184770 128184770 1 + T A rs5937 128184754 + 128184734 128184774 41 CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGATGAGT CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGAAGAGT < 41bp 1 0.353917174251219 1 0.457646727561951 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128184754 chr2:128184770 nonsynonymous SNV 0.652 1 37 hm5C_associated_SNPs_3969 0 0 2 PPIG POSTAR2 ENCODE chr2:128184763-128184781
64251 chr2 128950217 128950217 1 + C T rs11542864 128950203 + 128950183 128950223 41 TTATGTTCTGTGTACAGTGGCATTTGATTGAGATCAAAGCC TTATGTTCTGTGTACAGTGGCATTTGATTGAGATTAAAGCC < 41bp 1 0.046898379001215 1 0.0508525669574738 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UGGT1 ENSG00000136731 UTR3 Human protein_coding chr2:128950203 chr2:128950217 . . 0 35 hm5C_associated_SNPs_3970 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:128949965-128950482
64251 chr2 130939836 130939836 1 + C A rs533602859 130939832 + 130939812 130939852 41 GGGGGCGCGGCGGGGCGGAGCGCACCTTTCCGCGGGCCGCG GGGGGCGCGGCGGGGCGGAGCGCAACTTTCCGCGGGCCGCG < 41bp 1 0.76336352278176 1 0.671704173088074 experiment 0.47327295443648 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MZT2B ENSG00000136699;ENSG00000152082 UTR5 Human other chr2:130939832 chr2:130939836 . . 0 25 hm5C_associated_SNPs_3983 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:130939820-130939860
64251 chr2 131103405 131103405 1 + T C rs77802032 131103398 + 131103378 131103418 41 TTTGGTCCTACTGCCTACTTCACGCTGTGCAATGTGGTCAT TTTGGTCCTACTGCCTACTTCACGCTGCGCAATGTGGTCAT < 41bp 1 0.714996591592763 1 0.126896142959595 experiment 0.570006816814474 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103398 chr2:131103405 nonsynonymous SNV 0.947 1 28 hm5C_associated_SNPs_3984 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:131103387-131103417
64251 chr2 131113748 131113748 1 + G C rs200795864 131113756 + 131113736 131113776 41 GCGGCCGGGAGGGGGCAGTCCTCGCCGGCGAGTTCAGCGTG GCGGCCGGGAGGCGGCAGTCCTCGCCGGCGAGTTCAGCGTG < 41bp 1 0.74286294498462 1 0.370303422212601 experiment 0.514274110030759 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131113756 chr2:131113748 nonsynonymous SNV 0.050 0 13 hm5C_associated_SNPs_3985 0 0 11 DDX3X POSTAR2 ENCODE chr2:131113696-131113773
64251 chr2 131113762 131113762 1 + G A rs200630854 131113756 + 131113736 131113776 41 GCGGCCGGGAGGGGGCAGTCCTCGCCGGCGAGTTCAGCGTG GCGGCCGGGAGGGGGCAGTCCTCGCCAGCGAGTTCAGCGTG < 41bp 1 0.774314301616979 1 0.364542633295059 experiment 0.451371396766041 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131113756 chr2:131113762 nonsynonymous SNV 0.676 0 27 hm5C_associated_SNPs_3986 0 0 11 DDX3X POSTAR2 ENCODE chr2:131113696-131113773
64251 chr2 131906250 131906250 1 + C G rs16856546 131906238 + 131906218 131906258 41 ACCTAGTGATGACCACGGGTCTGCTTTTCTCTCTGATCCTA ACCTAGTGATGACCACGGGTCTGCTTTTCTCTGTGATCCTA < 41bp 1 0.476454882281298 1 0.0669590532779694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906238 chr2:131906250 . . 0 33 hm5C_associated_SNPs_3989 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906241 + 131906221 131906261 41 TAGTGATGACCACGGGTCTGCTTTTCTCTCTGATCCTAGGG TAGTGATGACCACGGGTCTGCTTTTCTCTGTGATCCTAGGG < 41bp 1 0.120334374816329 1 0.0328963398933411 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906241 chr2:131906250 . . 0 30 hm5C_associated_SNPs_3990 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906246 + 131906226 131906266 41 ATGACCACGGGTCTGCTTTTCTCTCTGATCCTAGGGGACTT ATGACCACGGGTCTGCTTTTCTCTGTGATCCTAGGGGACTT < 41bp 1 0.588651599714076 1 0.562032461166382 experiment 0.822696800571848 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906246 chr2:131906250 . . 0 25 hm5C_associated_SNPs_3991 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906248 + 131906228 131906268 41 GACCACGGGTCTGCTTTTCTCTCTGATCCTAGGGGACTTGT GACCACGGGTCTGCTTTTCTCTGTGATCCTAGGGGACTTGT < 41bp 1 0.707911310312896 1 0.25725656747818 experiment 0.584177379374207 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906248 chr2:131906250 . . 0 23 hm5C_associated_SNPs_3992 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906255 + 131906235 131906275 41 GGTCTGCTTTTCTCTCTGATCCTAGGGGACTTGTTGACATG GGTCTGCTTTTCTCTGTGATCCTAGGGGACTTGTTGACATG < 41bp 1 0.265671565935996 1 0.392403036355972 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906255 chr2:131906250 . . 0 16 hm5C_associated_SNPs_3993 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906256 + 131906236 131906276 41 GTCTGCTTTTCTCTCTGATCCTAGGGGACTTGTTGACATGG GTCTGCTTTTCTCTGTGATCCTAGGGGACTTGTTGACATGG < 41bp 1 0.692205032017063 1 0.509546279907227 experiment 0.615589935965874 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906256 chr2:131906250 . . 0 15 hm5C_associated_SNPs_3994 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 131906250 131906250 1 + C G rs16856546 131906264 + 131906244 131906284 41 TTCTCTCTGATCCTAGGGGACTTGTTGACATGGGAGTGTCT TTCTCTGTGATCCTAGGGGACTTGTTGACATGGGAGTGTCT < 41bp 1 0.240566731170908 1 0.0371639132499695 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHB2 ENSG00000115762 UTR3 Human protein_coding chr2:131906264 chr2:131906250 . . 0 7 hm5C_associated_SNPs_3995 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:131906169-131906265
64251 chr2 136511425 136511425 1 + A T rs567855089 136511411 + 136511391 136511431 41 AGTTTTTAAAATGTGAATATCTGAAAAACAATATAGATCAG AGTTTTTAAAATGTGAATATCTGAAAAACAATATTGATCAG < 41bp 1 0.619028764720494 1 0.362825691699982 experiment 0.761942470559013 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBXN4 ENSG00000144224 UTR3 Human protein_coding chr2:136511411 chr2:136511425 . . 0 35 hm5C_associated_SNPs_3998 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:136511408-136511527
64251 chr2 136537908 136537908 1 + A G rs540906675 136537910 + 136537890 136537930 41 GACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTG GACTTCAGTGAGAGTAACGTCGTCAGAACCCCCAAACCCTG < 41bp 1 0.772163337923091 1 0.430613934993744 experiment 0.455673324153818 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136537910 chr2:136537908 synonymous SNV . 0 19 hm5C_associated_SNPs_3999 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:136537895-136537931
64251 chr2 136537911 136537911 1 + G A rs62170084 136537910 + 136537890 136537930 41 GACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTG GACTTCAGTGAGAGTAACATCATCAGAACCCCCAAACCCTG < 41bp 1 0.782405210396436 1 0.420642584562302 experiment 0.435189579207128 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136537910 chr2:136537911 synonymous SNV . 0 22 hm5C_associated_SNPs_4000 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:136537895-136537931
64251 chr2 149632883 149632883 1 + C A rs7582522 149632866 + 149632846 149632886 41 GGTCTGAGCCGGGCGAGGCTCGCTCCCTGCGCATCGCCTCC GGTCTGAGCCGGGCGAGGCTCGCTCCCTGCGCATCGCATCC < 41bp 1 0.338064828366213 1 0.0873278975486755 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KIF5C ENSG00000231079 ncRNA_intronic Human antisense chr2:149632866 chr2:149632883 . . 0 38 hm5C_associated_SNPs_4001 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr2:149632863-149632897
64251 chr2 152266465 152266465 1 + G A rs75732944 152266463 + 152266443 152266483 41 GCGCCGCACGCGTGAGTAAACAGCCGGAGCTGGGAAAGTCG GCGCCGCACGCGTGAGTAAACAACCGGAGCTGGGAAAGTCG < 41bp 1 0.565215806599422 1 0.179571479558945 experiment 0.869568386801156 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIF1 ENSG00000080345 UTR5 Human protein_coding chr2:152266463 chr2:152266465 . . 0 23 hm5C_associated_SNPs_4002 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:152266460-152266480
64251 chr2 152266473 152266473 1 + T C rs2290368 152266463 + 152266443 152266483 41 GCGCCGCACGCGTGAGTAAACAGCCGGAGCTGGGAAAGTCG GCGCCGCACGCGTGAGTAAACAGCCGGAGCCGGGAAAGTCG < 41bp 1 0.755028515811639 1 0.337906420230865 experiment 0.489942968376721 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152266463 chr2:152266473 unknown . 0 31 hm5C_associated_SNPs_4003 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:152266460-152266480
64251 chr2 153505714 153505714 1 + A G rs139450099 153505709 + 153505689 153505729 41 CTTGGTGAAGGTCCCTTTTCCTTGGATGTGTAGTTATATGA CTTGGTGAAGGTCCCTTTTCCTTGGGTGTGTAGTTATATGA < 41bp 1 0.449002993664431 1 0.27044090628624 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FMNL2 ENSG00000157827 UTR3 Human protein_coding chr2:153505709 chr2:153505714 . . 0 26 hm5C_associated_SNPs_4004 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:153505619-153505716
64251 chr2 153575305 153575305 1 + G T rs116506483 153575297 + 153575277 153575317 41 GGATGCGACCAAGTGGCCCGCGACCTGCGGGCGGAGTTCTC GGATGCGACCAAGTGGCCCGCGACCTGCTGGCGGAGTTCTC < 41bp 1 0.524596540291505 1 0.13776421546936 experiment 0.95080691941699 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575297 chr2:153575305 nonsynonymous SNV 0.994 2 29 hm5C_associated_SNPs_4005 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:153575298-153575329
64251 chr2 157439561 157439561 1 + A G rs184834240 157439565 + 157439545 157439585 41 CACTAGAAAACATTCCAAAACTTTAAGGTGTTGGTGTATTT CACTAGAAAACATTCCGAAACTTTAAGGTGTTGGTGTATTT < 41bp 1 0.108438982773803 1 0.0760300159454346 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPD2 ENSG00000115159 UTR3 Human protein_coding chr2:157439565 chr2:157439561 . . 0 17 hm5C_associated_SNPs_4007 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr2:157439550-157439571
64251 chr2 159857608 159857608 1 + A G rs78057739 159857616 + 159857596 159857636 41 TGACTGCTGGGCAGGAACGTCTCTCAGGAGAAAGAGTGGAA TGACTGCTGGGCGGGAACGTCTCTCAGGAGAAAGAGTGGAA < 41bp 1 0.160933271267614 1 0.118828743696213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TANC1 ENSG00000115183 UTR5 Human protein_coding chr2:159857616 chr2:159857608 . . 0 13 hm5C_associated_SNPs_4008 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:159857597-159857622
64251 chr2 159857608 159857608 1 + A G rs78057739 159857618 + 159857598 159857638 41 ACTGCTGGGCAGGAACGTCTCTCAGGAGAAAGAGTGGAAGA ACTGCTGGGCGGGAACGTCTCTCAGGAGAAAGAGTGGAAGA < 41bp 1 0.577762772592949 1 0.240316569805145 experiment 0.844474454814102 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TANC1 ENSG00000115183 UTR5 Human protein_coding chr2:159857618 chr2:159857608 . . 0 11 hm5C_associated_SNPs_4009 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:159857597-159857622
64251 chr2 159857608 159857608 1 + A G rs78057739 159857620 + 159857600 159857640 41 TGCTGGGCAGGAACGTCTCTCAGGAGAAAGAGTGGAAGAGA TGCTGGGCGGGAACGTCTCTCAGGAGAAAGAGTGGAAGAGA < 41bp 1 0.762692557925313 1 0.942403793334961 experiment 0.474614884149374 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TANC1 ENSG00000115183 UTR5 Human protein_coding chr2:159857620 chr2:159857608 . . 0 9 hm5C_associated_SNPs_4010 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:159857597-159857622
64251 chr2 163200715 163200715 1 + G A rs534733381 163200719 + 163200699 163200739 41 TTCTCCCAGCACTGCGGACGCGACTCGAGGGTGACGCTCGC TTCTCCCAGCACTGCGAACGCGACTCGAGGGTGACGCTCGC < 41bp 1 0.720373364183182 1 0.669076681137085 experiment 0.559253271633637 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GCA ENSG00000115271 UTR5 Human protein_coding chr2:163200719 chr2:163200715 . . 0 17 hm5C_associated_SNPs_4012 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr2:163200680-163200718
64251 chr2 169630178 169630178 1 + A G rs140610236 169630185 + 169630165 169630205 41 CGCCCTTGAAGAAAACGCAGCAAAATATTTTAAAATGAAGA CGCCCTTGAAGAAGACGCAGCAAAATATTTTAAAATGAAGA < 41bp 1 0.267784274196112 1 0.418375730514526 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CERS6-AS1 ENSG00000227617 ncRNA_exonic Human processed_transcript chr2:169630185 chr2:169630178 . . 0 14 hm5C_associated_SNPs_4013 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:169630166-169630187
64251 chr2 173451103 173451103 1 + G A rs555187654 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCGTGTTGAGACCTCCCACGCAGTGCCTCTGGT < 41bp 1 0.295519898018833 1 0.415821522474289 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451103 nonsynonymous SNV 0.125 1 26 hm5C_associated_SNPs_4016 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr2 173940620 173940620 1 + A G rs62175800 173940619 + 173940599 173940639 41 GAATGTTCAACTCCTAACTGCAGCGGAAACGTGGGAGCCGC GAATGTTCAACTCCTAACTGCGGCGGAAACGTGGGAGCCGC < 41bp 1 0.657561117810523 1 0.695852637290955 experiment 0.684877764378955 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K20 ENSG00000091436 UTR5 Human protein_coding chr2:173940619 chr2:173940620 . . 0 22 hm5C_associated_SNPs_4017 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:173940600-173940620
64251 chr2 174087947 174087947 1 + T C rs549683299 174087966 + 174087946 174087986 41 ATAGTGATGAAGAAAGGGATCAGAGTCTGACTGTCACTCAG ACAGTGATGAAGAAAGGGATCAGAGTCTGACTGTCACTCAG < 41bp 1 0.658795605871325 1 0.726342558860779 experiment 0.68240878825735 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP3K20-AS1 ENSG00000238133 ncRNA_intronic Human antisense chr2:174087966 chr2:174087947 . . 0 2 hm5C_associated_SNPs_4018 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:174087907-174087949
64251 chr2 174224147 174224147 1 + C T rs544881819 174224138 + 174224118 174224158 41 CCAAGGCCAGATGTCACTAACGAACTGGCCGGTATTTTTCA CCAAGGCCAGATGTCACTAACGAACTGGCTGGTATTTTTCA < 41bp 1 0.299126934787534 1 0.167586773633957 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174224138 chr2:174224147 synonymous SNV . 0 30 hm5C_associated_SNPs_4020 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:174224133-174224179
64251 chr2 175268915 175268915 1 + G A rs555001328 175268914 + 175268894 175268934 41 ACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGT ACATGAGAAACTATGCTAAGCAGAAAGGTTGGTGGGATGGT < 41bp 1 0.738626930851778 1 0.154331207275391 experiment 0.522746138296445 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175268914 chr2:175268915 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_4021 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr2:175268915-175268916
64251 chr2 175268933 175268933 1 + G A rs150257275 175268914 + 175268894 175268934 41 ACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGT ACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGAT < 41bp 1 0.791844109121244 1 0.158812940120697 experiment 0.416311781757512 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175268914 chr2:175268933 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_4022 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:175268933-175268934
64251 chr2 176972562 176972562 1 + C G rs541864847 176972551 + 176972531 176972571 41 GCGCCGGGGCCGCCGCACGGCCCCGCGGGCGCCGCCTCCAA GCGCCGGGGCCGCCGCACGGCCCCGCGGGCGGCGCCTCCAA < 41bp 1 0.609751838013748 1 0.416267722845078 experiment 0.780496323972504 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176972551 chr2:176972562 nonsynonymous SNV 0.985 1 32 hm5C_associated_SNPs_4023 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:176972545-176972580
64251 chr2 176972562 176972562 1 + C G rs541864847 176972552 + 176972532 176972572 41 CGCCGGGGCCGCCGCACGGCCCCGCGGGCGCCGCCTCCAAC CGCCGGGGCCGCCGCACGGCCCCGCGGGCGGCGCCTCCAAC < 41bp 1 0.501362503168923 1 0.377550601959229 experiment 0.997274993662154 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176972552 chr2:176972562 nonsynonymous SNV 0.985 1 31 hm5C_associated_SNPs_4024 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:176972545-176972580
64251 chr2 176972562 176972562 1 + C G rs541864847 176972553 + 176972533 176972573 41 GCCGGGGCCGCCGCACGGCCCCGCGGGCGCCGCCTCCAACT GCCGGGGCCGCCGCACGGCCCCGCGGGCGGCGCCTCCAACT < 41bp 1 0.711314759969847 1 0.471373349428177 experiment 0.577370480060307 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176972553 chr2:176972562 nonsynonymous SNV 0.985 1 30 hm5C_associated_SNPs_4025 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:176972545-176972580
64251 chr2 183581120 183581120 1 + G A rs143023681 183581113 + 183581093 183581133 41 GTCGGAGAGTGCGTGTGCTTCTCTCCTGCACGCGGTGCTTG GTCGGAGAGTGCGTGTGCTTCTCTCCTACACGCGGTGCTTG < 41bp 1 0.392934667354189 1 0.49871751666069 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC10 ENSG00000077232 UTR5 Human protein_coding chr2:183581113 chr2:183581120 . . 0 28 hm5C_associated_SNPs_4028 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:183581100-183581120
64251 chr2 187351036 187351036 1 + G A rs559601097 187351051 + 187351031 187351071 41 TCCTCGTCCTGCCGCAGGGCCAGAACCCCTGACGGTATTCA TCCTCATCCTGCCGCAGGGCCAGAACCCCTGACGGTATTCA < 41bp 1 0.718184902285811 1 0.0915909111499786 experiment 0.563630195428377 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZC3H15 ENSG00000065548 UTR5 Human protein_coding chr2:187351051 chr2:187351036 . . 0 6 hm5C_associated_SNPs_4029 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:187351013-187351044
64251 chr2 187541575 187541575 1 + G A rs140775791 187541563 + 187541543 187541583 41 ACCACTAATGTCACCTGGGGCATTCAGCCAGCGCCCATGCC ACCACTAATGTCACCTGGGGCATTCAGCCAGCACCCATGCC < 41bp 1 0.0246297176329792 1 0.0299030244350433 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ITGAV ENSG00000138448 CDS Human protein_coding chr2:187541563 chr2:187541575 synonymous SNV . 0 33 hm5C_associated_SNPs_4030 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:187541549-187541593
64251 chr2 190320083 190320083 1 + C A rs6737615 190320076 + 190320056 190320096 41 GCTGGTTTCAGTGAAACTGCCAAAATCCTCAAGCCAGGAAG GCTGGTTTCAGTGAAACTGCCAAAATCATCAAGCCAGGAAG < 41bp 1 0.636203314013569 1 0.542499303817749 experiment 0.727593371972862 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190320076 chr2:190320083 synonymous SNV . 0 28 hm5C_associated_SNPs_4032 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190320066-190320103
64251 chr2 190323530 190323530 1 + A C rs1157910 190323529 + 190323509 190323549 41 GCATGCTAAAAACAATTTTACATGTGTAGCATGTCACCCAA GCATGCTAAAAACAATTTTACCTGTGTAGCATGTCACCCAA < 41bp 1 0.483031394531214 1 0.0753546357154846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190323529 chr2:190323530 synonymous SNV . 0 22 hm5C_associated_SNPs_4033 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:190323506-190323532
64251 chr2 190323530 190323530 1 + A C rs1157910 190323543 + 190323523 190323563 41 ATTTTACATGTGTAGCATGTCACCCAACGGAAGACTGCATC ATTTTACCTGTGTAGCATGTCACCCAACGGAAGACTGCATC < 41bp 1 0.512250862985728 1 0.0618441700935364 experiment 0.975498274028545 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190323543 chr2:190323530 synonymous SNV . 0 8 hm5C_associated_SNPs_4034 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:190323506-190323532
64251 chr2 190327346 190327346 1 + C G rs370964637 190327327 + 190327307 190327347 41 TATTGAACATATCTCAGTCTCGCCTGCAGGAGATTTATTCT TATTGAACATATCTCAGTCTCGCCTGCAGGAGATTTATTGT < 41bp 1 0.601980979495722 1 0.122766673564911 experiment 0.796038041008557 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190327327 chr2:190327346 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_4035 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:190327338-190327362
64251 chr2 191524448 191524448 1 + G A rs191774044 191524463 + 191524443 191524483 41 CCCGCGTCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC CCCGCATCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC < 41bp 1 0.557713929128044 1 0.286995321512222 experiment 0.884572141743912 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524463 chr2:191524448 synonymous SNV . 0 6 hm5C_associated_SNPs_4037 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:191524396-191524448
64251 chr2 192141726 192141726 1 + C G rs35294642 192141711 + 192141691 192141731 41 GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAA GAACCTCTCAATGAGGAGACCTTCATCAACAACCTGAAGAA < 41bp 1 0.357950031245195 1 0.167860358953476 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141711 chr2:192141726 synonymous SNV . 0 36 hm5C_associated_SNPs_4038 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:192141718-192141748
64251 chr2 192160939 192160939 1 + C T rs16833579 192160923 + 192160903 192160943 41 AAAGTGGAAGAATACAGGAACAGAAATTTTTATGAACTGAG AAAGTGGAAGAATACAGGAACAGAAATTTTTATGAATTGAG < 41bp 1 0.301091173496315 1 0.389411926269531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192160923 chr2:192160939 synonymous SNV . 0 37 hm5C_associated_SNPs_4039 0 0 2 GRWD1 POSTAR2 ENCODE chr2:192160928-192160953
64251 chr2 201171129 201171129 1 + G A rs74340199 201171130 + 201171110 201171150 41 GCGAGGAAGTCGGTCTGGAGCAAGCAAGCAAAGTGCGGAAG GCGAGGAAGTCGGTCTGGAACAAGCAAGCAAAGTGCGGAAG < 41bp 1 0.475122075524279 1 0.768072366714478 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPATS2L ENSG00000196141 UTR5 Human protein_coding chr2:201171130 chr2:201171129 . . 0 20 hm5C_associated_SNPs_4040 0 0 2 NCBP2 POSTAR2 ENCODE chr2:201171071-201171143
64251 chr2 201756554 201756554 1 + G A rs114431057 201756538 + 201756518 201756558 41 TGGCAGAGCCACTATTTGAACCCAGATCTCTATGACGACAG TGGCAGAGCCACTATTTGAACCCAGATCTCTATGACAACAG < 41bp 1 0.33856661585407 1 0.0872772634029388 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIF3L1 ENSG00000196290 UTR5 Human protein_coding chr2:201756538 chr2:201756554 . . 0 37 hm5C_associated_SNPs_4041 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:201756514-201756575
64251 chr2 201756554 201756554 1 + G A rs114431057 201756539 + 201756519 201756559 41 GGCAGAGCCACTATTTGAACCCAGATCTCTATGACGACAGC GGCAGAGCCACTATTTGAACCCAGATCTCTATGACAACAGC < 41bp 1 0.394997294617325 1 0.158687710762024 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIF3L1 ENSG00000196290 UTR5 Human protein_coding chr2:201756539 chr2:201756554 . . 0 36 hm5C_associated_SNPs_4042 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:201756514-201756575
64251 chr2 201756554 201756554 1 + G A rs114431057 201756540 + 201756520 201756560 41 GCAGAGCCACTATTTGAACCCAGATCTCTATGACGACAGCT GCAGAGCCACTATTTGAACCCAGATCTCTATGACAACAGCT < 41bp 1 0.308788764952027 1 0.177335023880005 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIF3L1 ENSG00000196290 UTR5 Human protein_coding chr2:201756540 chr2:201756554 . . 0 35 hm5C_associated_SNPs_4043 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:201756514-201756575
64251 chr2 203156096 203156096 1 + A G rs530919021 203156092 + 203156072 203156112 41 TTTACACTTATTGTTGTTCACCTGATAACATAAATATGAGG TTTACACTTATTGTTGTTCACCTGGTAACATAAATATGAGG < 41bp 1 0.185803173194322 1 0.0735887289047241 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SNORD11B ENSG00000271852 ncRNA_exonic Human snoRNA chr2:203156092 chr2:203156096 . . 0 25 hm5C_associated_SNPs_4048 0 0 64 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:203156040-203156100
64251 chr2 203499949 203499949 1 + G A rs193178985 203499939 + 203499919 203499959 41 GCGGGTGAGGCGCAATGGGTCCCCCACGCCGGCCGGCTCCC GCGGGTGAGGCGCAATGGGTCCCCCACGCCAGCCGGCTCCC < 41bp 1 0.402590949230748 1 0.0389758050441742 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM117B ENSG00000138439 CDS Human protein_coding chr2:203499939 chr2:203499949 synonymous SNV . 0 31 hm5C_associated_SNPs_4049 0 0 2 GRWD1 POSTAR2 ENCODE chr2:203499914-203500028
64251 chr2 203499949 203499949 1 + G A rs193178985 203499940 + 203499920 203499960 41 CGGGTGAGGCGCAATGGGTCCCCCACGCCGGCCGGCTCCCT CGGGTGAGGCGCAATGGGTCCCCCACGCCAGCCGGCTCCCT < 41bp 1 0.663622106622807 1 0.0842366516590118 experiment 0.672755786754386 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM117B ENSG00000138439 CDS Human protein_coding chr2:203499940 chr2:203499949 synonymous SNV . 0 30 hm5C_associated_SNPs_4050 0 0 2 GRWD1 POSTAR2 ENCODE chr2:203499914-203500028
64251 chr2 203499949 203499949 1 + G A rs193178985 203499941 + 203499921 203499961 41 GGGTGAGGCGCAATGGGTCCCCCACGCCGGCCGGCTCCCTT GGGTGAGGCGCAATGGGTCCCCCACGCCAGCCGGCTCCCTT < 41bp 1 0.364180268184657 1 0.0174531638622284 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM117B ENSG00000138439 CDS Human protein_coding chr2:203499941 chr2:203499949 synonymous SNV . 0 29 hm5C_associated_SNPs_4051 0 0 2 GRWD1 POSTAR2 ENCODE chr2:203499914-203500028
64251 chr2 203499949 203499949 1 + G A rs193178985 203499942 + 203499922 203499962 41 GGTGAGGCGCAATGGGTCCCCCACGCCGGCCGGCTCCCTTG GGTGAGGCGCAATGGGTCCCCCACGCCAGCCGGCTCCCTTG < 41bp 1 0.727274708503398 1 0.147596746683121 experiment 0.545450582993203 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM117B ENSG00000138439 CDS Human protein_coding chr2:203499942 chr2:203499949 synonymous SNV . 0 28 hm5C_associated_SNPs_4052 0 0 2 GRWD1 POSTAR2 ENCODE chr2:203499914-203500028
64251 chr2 203499949 203499949 1 + G A rs193178985 203499943 + 203499923 203499963 41 GTGAGGCGCAATGGGTCCCCCACGCCGGCCGGCTCCCTTGG GTGAGGCGCAATGGGTCCCCCACGCCAGCCGGCTCCCTTGG < 41bp 1 0.755049053947048 1 0.458463251590729 experiment 0.489901892105905 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM117B ENSG00000138439 CDS Human protein_coding chr2:203499943 chr2:203499949 synonymous SNV . 0 27 hm5C_associated_SNPs_4053 0 0 2 GRWD1 POSTAR2 ENCODE chr2:203499914-203500028
64251 chr2 203879703 203879703 1 + A G rs540119987 203879684 + 203879664 203879704 41 GTTAGACGGCTGCCGGGCGGCGGCTGCCGCGCGGCACACAA GTTAGACGGCTGCCGGGCGGCGGCTGCCGCGCGGCACACGA < 41bp 1 0.623005969250693 1 0.827790856361389 experiment 0.753988061498615 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NBEAL1 ENSG00000144426 UTR5 Human protein_coding chr2:203879684 chr2:203879703 . . 0 40 hm5C_associated_SNPs_4054 0 0 3 NCBP2 POSTAR2 ENCODE chr2:203879617-203879705
64251 chr2 203879703 203879703 1 + A G rs540119987 203879690 + 203879670 203879710 41 CGGCTGCCGGGCGGCGGCTGCCGCGCGGCACACAATGTGAG CGGCTGCCGGGCGGCGGCTGCCGCGCGGCACACGATGTGAG < 41bp 1 0.47323416785908 1 0.47701695561409 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NBEAL1 ENSG00000144426 UTR5 Human protein_coding chr2:203879690 chr2:203879703 . . 0 34 hm5C_associated_SNPs_4055 0 0 3 NCBP2 POSTAR2 ENCODE chr2:203879617-203879705
64251 chr2 203879703 203879703 1 + A G rs540119987 203879691 + 203879671 203879711 41 GGCTGCCGGGCGGCGGCTGCCGCGCGGCACACAATGTGAGC GGCTGCCGGGCGGCGGCTGCCGCGCGGCACACGATGTGAGC < 41bp 1 0.649169521820622 1 0.843996286392212 experiment 0.701660956358757 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NBEAL1 ENSG00000144426 UTR5 Human protein_coding chr2:203879691 chr2:203879703 . . 0 33 hm5C_associated_SNPs_4056 0 0 3 NCBP2 POSTAR2 ENCODE chr2:203879617-203879705
64251 chr2 203879703 203879703 1 + A G rs540119987 203879698 + 203879678 203879718 41 GGGCGGCGGCTGCCGCGCGGCACACAATGTGAGCCCGGTGA GGGCGGCGGCTGCCGCGCGGCACACGATGTGAGCCCGGTGA < 41bp 1 0.351391190216936 1 0.288718640804291 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NBEAL1 ENSG00000144426 UTR5 Human protein_coding chr2:203879698 chr2:203879703 . . 0 26 hm5C_associated_SNPs_4057 0 0 3 NCBP2 POSTAR2 ENCODE chr2:203879617-203879705
64251 chr2 204103736 204103736 1 + C G rs375917906 204103739 + 204103719 204103759 41 TGGGCCAGGCTGAGGCGCTGCTGCTGGAGCGGCCGATCCGA TGGGCCAGGCTGAGGCGGTGCTGCTGGAGCGGCCGATCCGA < 41bp 1 0.616176082822791 1 0.144709706306458 experiment 0.767647834354418 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP20A1 ENSG00000119004 UTR5 Human protein_coding chr2:204103739 chr2:204103736 . . 0 18 hm5C_associated_SNPs_4059 0 0 1 DDX3X POSTAR2 ENCODE chr2:204103717-204103800
64251 chr2 207024680 207024680 1 + C T rs180935095 207024663 + 207024643 207024683 41 GCGCCCACAATTTGCGCGCTCTCTTTCTGCTGCTCCCCAGC GCGCCCACAATTTGCGCGCTCTCTTTCTGCTGCTCCCTAGC < 41bp 1 0.333245194135996 1 0.0147961378097534 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 UTR5 Human protein_coding chr2:207024663 chr2:207024680 . . 0 38 hm5C_associated_SNPs_4061 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr2 207024680 207024680 1 + C T rs180935095 207024687 + 207024667 207024707 41 TTCTGCTGCTCCCCAGCTCTCGGATACAGCCGACACCATGG TTCTGCTGCTCCCTAGCTCTCGGATACAGCCGACACCATGG < 41bp 1 0.711425742362777 1 0.410146206617355 experiment 0.577148515274446 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 UTR5 Human protein_coding chr2:207024687 chr2:207024680 . . 0 14 hm5C_associated_SNPs_4062 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr2 207024680 207024680 1 + C T rs180935095 207024693 + 207024673 207024713 41 TGCTCCCCAGCTCTCGGATACAGCCGACACCATGGGTTTCG TGCTCCCTAGCTCTCGGATACAGCCGACACCATGGGTTTCG < 41bp 1 0.552358166505063 1 0.292326182126999 experiment 0.895283666989874 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 UTR5 Human protein_coding chr2:207024693 chr2:207024680 . . 0 8 hm5C_associated_SNPs_4063 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr2 207026649 207026649 1 + C A rs370161702 207026639 + 207026619 207026659 41 AAAATCAAATCACCATCTTTCGGCTGAGTTCGTGATGGATT AAAATCAAATCACCATCTTTCGGCTGAGTTAGTGATGGATT < 41bp 1 0.358470010588446 1 0.780875563621521 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD51 ENSG00000207047 ncRNA_exonic Human snoRNA chr2:207026639 chr2:207026649 . . 0 31 hm5C_associated_SNPs_4064 0 0 57 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:207026581-207026674
64251 chr2 207026650 207026650 1 + G A rs374498694 207026639 + 207026619 207026659 41 AAAATCAAATCACCATCTTTCGGCTGAGTTCGTGATGGATT AAAATCAAATCACCATCTTTCGGCTGAGTTCATGATGGATT < 41bp 1 0.323448681162237 1 0.579312384128571 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD51 ENSG00000207047 ncRNA_exonic Human snoRNA chr2:207026639 chr2:207026650 . . 0 32 hm5C_associated_SNPs_4065 0 0 55 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:207026581-207026674
64251 chr2 207026650 207026650 1 + G A rs374498694 207026649 + 207026629 207026669 41 CACCATCTTTCGGCTGAGTTCGTGATGGATTTGCTTTTTTC CACCATCTTTCGGCTGAGTTCATGATGGATTTGCTTTTTTC < 41bp 1 0.49393540740069 1 0.356756269931793 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD51 ENSG00000207047 ncRNA_exonic Human snoRNA chr2:207026649 chr2:207026650 . . 0 22 hm5C_associated_SNPs_4066 0 0 55 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:207026581-207026674
64251 chr2 207630338 207630338 1 + C T rs3762567 207630343 + 207630323 207630363 41 TCTCGGGGAAGCTGTCATGGCTGCTCCTGTACGTAGTCACG TCTCGGGGAAGCTGTTATGGCTGCTCCTGTACGTAGTCACG < 41bp 1 0.422647396146504 1 0.0533406734466553 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FASTKD2 ENSG00000118246 UTR5 Human protein_coding chr2:207630343 chr2:207630338 . . 0 16 hm5C_associated_SNPs_4069 1 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:207630336-207630360
64251 chr2 207630359 207630359 1 + T C rs546021759 207630343 + 207630323 207630363 41 TCTCGGGGAAGCTGTCATGGCTGCTCCTGTACGTAGTCACG TCTCGGGGAAGCTGTCATGGCTGCTCCTGTACGTAGCCACG < 41bp 1 0.443642211664875 1 0.0444039702415466 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FASTKD2 ENSG00000118246 UTR5 Human protein_coding chr2:207630343 chr2:207630359 . . 0 37 hm5C_associated_SNPs_4070 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:207630336-207630360
64251 chr2 207630360 207630360 1 + C T rs16838842 207630343 + 207630323 207630363 41 TCTCGGGGAAGCTGTCATGGCTGCTCCTGTACGTAGTCACG TCTCGGGGAAGCTGTCATGGCTGCTCCTGTACGTAGTTACG < 41bp 1 0.36595539285353 1 0.045082688331604 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FASTKD2 ENSG00000118246 UTR5 Human protein_coding chr2:207630343 chr2:207630360 . . 0 38 hm5C_associated_SNPs_4071 2 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:207630336-207630360
64251 chr2 208619640 208619640 1 + G A rs144067776 208619643 + 208619623 208619663 41 TGAAGCTGGGTGTGGTGGTGCACGCCTATAGTCCCAGCTAC TGAAGCTGGGTGTGGTGATGCACGCCTATAGTCCCAGCTAC < 41bp 1 0.783078917682431 1 0.207935929298401 experiment 0.433842164635137 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCNYL1 ENSG00000163249 UTR3 Human protein_coding chr2:208619643 chr2:208619640 . . 0 18 hm5C_associated_SNPs_4072 0 0 2 ILF3 POSTAR2 ENCODE chr2:208619624-208619683
64251 chr2 209218837 209218837 1 + G A rs146239645 209218844 + 209218824 209218864 41 ATTATTCTTTGCTGGTTGGGCGAGATGATACTAGCAATGAG ATTATTCTTTGCTAGTTGGGCGAGATGATACTAGCAATGAG < 41bp 1 0.527433622167272 1 0.559588432312012 experiment 0.945132755665457 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209218844 chr2:209218837 synonymous SNV . 0 14 hm5C_associated_SNPs_4073 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:209218820-209218840
64251 chr2 211456637 211456637 1 + A G rs1047883 211456636 + 211456616 211456656 41 CATGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAA CATGGCTATGCCTTGGACAACGCCCTCCCTGCTGGCTGGAA < 41bp 1 0.262827301564102 1 0.080890417098999 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456636 chr2:211456637 nonsynonymous SNV 0.417 1 22 hm5C_associated_SNPs_4074 2 0 6 METTL3 POSTAR2 GSE46705,GSM1135012 chr2:211456620-211456640
64251 chr2 211456637 211456637 1 + A G rs1047883 211456638 + 211456618 211456658 41 TGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAAAC TGGCTATGCCTTGGACAACGCCCTCCCTGCTGGCTGGAAAC < 41bp 1 0.0456061948919894 1 0.0693839490413666 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456638 chr2:211456637 nonsynonymous SNV 0.417 1 20 hm5C_associated_SNPs_4075 2 0 6 METTL3 POSTAR2 GSE46705,GSM1135012 chr2:211456620-211456640
64251 chr2 211456639 211456639 1 + C T rs2229589 211456636 + 211456616 211456656 41 CATGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAA CATGGCTATGCCTTGGACAACACTCTCCCTGCTGGCTGGAA < 41bp 1 0.106238517788067 1 0.0719398856163025 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456636 chr2:211456639 synonymous SNV . 0 24 hm5C_associated_SNPs_4076 2 0 5 METTL3 POSTAR2 GSE46705,GSM1135012 chr2:211456620-211456640
64251 chr2 211456639 211456639 1 + C T rs2229589 211456638 + 211456618 211456658 41 TGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAAAC TGGCTATGCCTTGGACAACACTCTCCCTGCTGGCTGGAAAC < 41bp 1 0.138701200637729 1 0.168387651443481 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456638 chr2:211456639 synonymous SNV . 0 22 hm5C_associated_SNPs_4077 2 0 5 METTL3 POSTAR2 GSE46705,GSM1135012 chr2:211456620-211456640
64251 chr2 211465359 211465359 1 + A T rs144230667 211465360 + 211465340 211465380 41 AGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTT AGTTGAGTCCATTATGGCTTCGGAAGACAGGCAGCTGTTTT < 41bp 1 0.591203858231382 1 0.830919444561005 experiment 0.817592283537235 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPS1 ENSG00000021826 CDS Human protein_coding chr2:211465360 chr2:211465359 nonsynonymous SNV 0.996 2 20 hm5C_associated_SNPs_4080 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:211465340-211465360
64251 chr2 216214269 216214269 1 + C T rs76436141 216214285 + 216214265 216214305 41 GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA GTGGTGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA < 41bp 1 0.716702234399106 1 0.383017301559448 experiment 0.566595531201789 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216214285 chr2:216214269 nonsynonymous SNV 0.877 1 5 hm5C_associated_SNPs_4081 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:216214260-216214280
64251 chr2 217012901 217012901 1 + A G rs207906 217012900 + 217012880 217012920 41 TCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT TCCTCCCGCTGAGGTGACAACGAAAAGTCAGATTCCTCTCT < 41bp 1 0.672949677569359 1 0.280017793178558 experiment 0.654100644861282 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012900 chr2:217012901 synonymous SNV . 0 22 hm5C_associated_SNPs_4082 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:217012901-217012931
64251 chr2 217277267 217277267 1 + G A rs79352134 217277270 + 217277250 217277290 41 AGCGCTTGAATACCCGTGGCCTAACCGTCCACTCGGAAGAC AGCGCTTGAATACCCGTAGCCTAACCGTCCACTCGGAAGAC < 41bp 1 0.19029326127645 1 0.0449472069740295 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMARCAL1 ENSG00000235042 ncRNA_exonic Human antisense chr2:217277270 chr2:217277267 . . 0 18 hm5C_associated_SNPs_4083 1 0 1 DDX3X POSTAR2 ENCODE chr2:217277244-217277372
64251 chr2 217277267 217277267 1 + G A rs79352134 217277274 + 217277254 217277294 41 CTTGAATACCCGTGGCCTAACCGTCCACTCGGAAGACCGGT CTTGAATACCCGTAGCCTAACCGTCCACTCGGAAGACCGGT < 41bp 1 0.0915205551294675 1 0.282492578029633 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCAL1 ENSG00000235042 ncRNA_exonic Human antisense chr2:217277274 chr2:217277267 . . 0 14 hm5C_associated_SNPs_4084 1 0 1 DDX3X POSTAR2 ENCODE chr2:217277244-217277372
64251 chr2 217363567 217363567 1 + C G rs200229085 217363561 + 217363541 217363581 41 ACCGCGCCTGCGCACCGCGTCTCTTCCTTTCTGGGCTCGGA ACCGCGCCTGCGCACCGCGTCTCTTCGTTTCTGGGCTCGGA < 41bp 1 0.324277790991138 1 0.0451550781726837 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL37A ENSG00000197756 UTR5 Human protein_coding chr2:217363561 chr2:217363567 . . 0 27 hm5C_associated_SNPs_4085 0 0 38 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:217363534-217363578
64251 chr2 217363567 217363567 1 + C G rs200229085 217363563 + 217363543 217363583 41 CGCGCCTGCGCACCGCGTCTCTTCCTTTCTGGGCTCGGACC CGCGCCTGCGCACCGCGTCTCTTCGTTTCTGGGCTCGGACC < 41bp 1 0.59177643028682 1 0.122486263513565 experiment 0.81644713942636 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL37A ENSG00000197756 UTR5 Human protein_coding chr2:217363563 chr2:217363567 . . 0 25 hm5C_associated_SNPs_4086 0 0 38 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:217363534-217363578
64251 chr2 217364764 217364764 1 + G T rs2272243 217364748 + 217364728 217364768 41 AGTGGCTGGCGGTGCCTGGACGTACAAGTGAGTCTAGTTCC AGTGGCTGGCGGTGCCTGGACGTACAAGTGAGTCTATTTCC < 41bp 1 0.351880644705342 1 0.315347671508789 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 intronic Human protein_coding chr2:217364748 chr2:217364764 . . 0 37 hm5C_associated_SNPs_4087 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:217364673-217364773
64251 chr2 219269089 219269089 1 + C G rs199987970 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGGAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG < 41bp 1 0.6044703322109 1 0.161958575248718 experiment 0.7910593355782 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269089 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_4092 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:219269056-219269089
64251 chr2 219270186 219270186 1 + T G rs199834461 219270171 + 219270151 219270191 41 CCCAGCATATGCTAGGCCCACCAGCTAAGTGTGTGTGGGGG CCCAGCATATGCTAGGCCCACCAGCTAAGTGTGTGGGGGGG < 41bp 1 0.198098480249064 1 0.58690619468689 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTDSP1 ENSG00000144579 UTR3 Human protein_coding chr2:219270171 chr2:219270186 . . 0 36 hm5C_associated_SNPs_4093 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr2:219270172-219270207
64251 chr2 219525067 219525067 1 + A G rs77487601 219525060 + 219525040 219525080 41 GGAGCCAGCCATTGAAGGTGCTGGAGCAGAGAGAGATATGG GGAGCCAGCCATTGAAGGTGCTGGAGCGGAGAGAGATATGG < 41bp 1 0.705106192531004 1 0.482317000627518 experiment 0.589787614937992 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control BCS1L ENSG00000074582 UTR5 Human protein_coding chr2:219525060 chr2:219525067 . . 0 28 hm5C_associated_SNPs_4099 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:219525051-219525139
64251 chr2 219677673 219677673 1 + G A rs190012697 219677655 + 219677635 219677675 41 TTGCTTTCACAGGGAAGAAGCTGATTGATGAGAAGCTCGAA TTGCTTTCACAGGGAAGAAGCTGATTGATGAGAAGCTCAAA < 41bp 1 0.267359437553986 1 0.141534835100174 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677655 chr2:219677673 nonsynonymous SNV 0.043 0 39 hm5C_associated_SNPs_4100 1 0 3 LIN28B POSTAR2 ENCODE chr2:219677657-219677713
64251 chr2 220097286 220097286 1 + G A rs200506719 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACACTGGATCGGAAGAGGGCTACATTTGAGAAGTTGAGCC < 41bp 1 0.715836792494239 1 0.692811131477356 experiment 0.568326415011522 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097286 nonsynonymous SNV 0.802 0 14 hm5C_associated_SNPs_4101 0 0 10 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr2 220110247 220110247 1 + C T rs576176118 220110237 + 220110217 220110257 41 GGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAG GGTGGCGCTTCTCTCTGGCCCGAGCCAGGTTAGTCCGGCAG < 41bp 1 0.650122017527676 1 0.389924883842468 experiment 0.699755964944648 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110237 chr2:220110247 . . 0 31 hm5C_associated_SNPs_4102 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:220110247-220110248
64251 chr2 220110247 220110247 1 + C T rs576176118 220110241 + 220110221 220110261 41 GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCA GCGCTTCTCTCTGGCCCGAGCCAGGTTAGTCCGGCAGTGCA < 41bp 1 0.618784057830212 1 0.771985411643982 experiment 0.762431884339576 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110241 chr2:220110247 . . 0 27 hm5C_associated_SNPs_4103 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:220110247-220110248
64251 chr2 220110255 220110255 1 + C G rs3755052 220110237 + 220110217 220110257 41 GGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAG GGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGGAG < 41bp 1 0.669945700090289 1 0.479234218597412 experiment 0.660108599819422 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110237 chr2:220110255 . . 0 39 hm5C_associated_SNPs_4104 0 0 3 DDX3X POSTAR2 ENCODE chr2:220110224-220110293
64251 chr2 220110255 220110255 1 + C G rs3755052 220110241 + 220110221 220110261 41 GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCA GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGGAGTGCA < 41bp 1 0.516557920703017 1 0.5899817943573 experiment 0.966884158593967 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110241 chr2:220110255 . . 0 35 hm5C_associated_SNPs_4105 0 0 3 DDX3X POSTAR2 ENCODE chr2:220110224-220110293
64251 chr2 220110258 220110258 1 + T C rs113112404 220110241 + 220110221 220110261 41 GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCA GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGCGCA < 41bp 1 0.601524503017967 1 0.788633584976196 experiment 0.796950993964066 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110241 chr2:220110258 . . 0 38 hm5C_associated_SNPs_4106 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:220110257-220110258
64251 chr2 220110395 220110395 1 + C T rs563637526 220110391 + 220110371 220110411 41 GATGGGCGTGGGAGCGGGGGCTGCCCAAAGATGGGCTGGGG GATGGGCGTGGGAGCGGGGGCTGCTCAAAGATGGGCTGGGG < 41bp 1 0.55736225446487 1 0.340701997280121 experiment 0.885275491070259 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110391 chr2:220110395 . . 0 25 hm5C_associated_SNPs_4107 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:220110358-220110398
64251 chr2 220114071 220114071 1 + G T rs558833993 220114084 + 220114064 220114104 41 CCTGATCGTTCAAGCTCATACATGGTTAATGATTAATGAGG CCTGATCTTTCAAGCTCATACATGGTTAATGATTAATGAGG < 41bp 1 0.57770280316305 1 0.106011182069778 experiment 0.844594393673899 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK16 ENSG00000115661 UTR3 Human protein_coding chr2:220114084 chr2:220114071 . . 0 8 hm5C_associated_SNPs_4110 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr2:220114071-220114094
64251 chr2 224824695 224824695 1 + T C rs35331337 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGGAGCCCTGTTACAGAGCAGTGGACCCGAGAGGACTGC < 41bp 1 0.566039832229592 1 0.382338881492615 experiment 0.867920335540816 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824695 synonymous SNV . 0 30 hm5C_associated_SNPs_4121 1 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:224824661-224824704
64251 chr2 227704146 227704146 1 + T A rs957630 227704165 + 227704145 227704185 41 TTACCTGTAAAACTCAGGAGCCGAGAAGCTTTAAGAACAGT TAACCTGTAAAACTCAGGAGCCGAGAAGCTTTAAGAACAGT < 41bp 1 0.117794035932293 1 0.357975423336029 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RHBDD1 ENSG00000144468 UTR5 Human protein_coding chr2:227704165 chr2:227704146 . . 0 2 hm5C_associated_SNPs_4124 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585670 chr2:227704140-227704161
64251 chr2 228190065 228190065 1 + A G rs7588961 228190066 + 228190046 228190086 41 TCCGTGCTCTCAGCCAACCACCTCTGAGAGCGCCCACTCGA TCCGTGCTCTCAGCCAACCGCCTCTGAGAGCGCCCACTCGA < 41bp 1 0.404556362882206 1 0.0491840243339539 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFF ENSG00000168958 UTR5 Human protein_coding chr2:228190066 chr2:228190065 . . 0 20 hm5C_associated_SNPs_4128 0 0 6 DDX3X POSTAR2 ENCODE chr2:228190058-228190148
64251 chr2 228190065 228190065 1 + A G rs7588961 228190067 + 228190047 228190087 41 CCGTGCTCTCAGCCAACCACCTCTGAGAGCGCCCACTCGAG CCGTGCTCTCAGCCAACCGCCTCTGAGAGCGCCCACTCGAG < 41bp 1 0.612515354152952 1 0.158970564603806 experiment 0.774969291694097 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFF ENSG00000168958 UTR5 Human protein_coding chr2:228190067 chr2:228190065 . . 0 19 hm5C_associated_SNPs_4129 0 0 6 DDX3X POSTAR2 ENCODE chr2:228190058-228190148
64251 chr2 228398422 228398422 1 + A G rs13015491 228398425 + 228398405 228398445 41 GCTGGTTTACAGACTGCAGACAAATATGCAGCACTTGCTAA GCTGGTTTACAGACTGCGGACAAATATGCAGCACTTGCTAA < 41bp 1 0.340353464123316 1 0.11762672662735 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228398425 chr2:228398422 synonymous SNV . 0 18 hm5C_associated_SNPs_4130 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:228398333-228398448
64251 chr2 228419614 228419614 1 + A T rs116326133 228419605 + 228419585 228419625 41 GATCAGCCACTTTTAAGGTGCTGTCATATATCTTGGAATGA GATCAGCCACTTTTAAGGTGCTGTCATATTTCTTGGAATGA < 41bp 1 0.0536788267099009 1 0.0680690109729767 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGFG1 ENSG00000173744 UTR3 Human protein_coding chr2:228419605 chr2:228419614 . . 0 30 hm5C_associated_SNPs_4131 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:228419552-228419632
64251 chr2 231327220 231327220 1 + G A rs75519436 231327230 + 231327210 231327250 41 TCTCAGCACCGAGAAGTGAGCCTGGTAAGGAAGTTTGGGAG TCTCAGCACCAAGAAGTGAGCCTGGTAAGGAAGTTTGGGAG < 41bp 1 0.417242375729011 1 0.323936462402344 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SP100 ENSG00000067066 CDS Human protein_coding chr2:231327230 chr2:231327220 synonymous SNV . 0 11 hm5C_associated_SNPs_4141 0 0 1 PPIG POSTAR2 ENCODE chr2:231327160-231327262
64251 chr2 231685434 231685434 1 + A G rs141969677 231685433 + 231685413 231685453 41 GTGCAGCGTGTCAGACACAACATTCATGTTACTCTTACATT GTGCAGCGTGTCAGACACAACGTTCATGTTACTCTTACATT < 41bp 1 0.29384300846984 1 0.157823175191879 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CAB39 ENSG00000135932 UTR3 Human protein_coding chr2:231685433 chr2:231685434 . . 0 22 hm5C_associated_SNPs_4142 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:231685401-231685440
64251 chr2 231912001 231912001 1 + A G rs146241761 231912019 + 231911999 231912039 41 TGAGCCACTGAGACAGATGGCTGTCCGCTTTGAGGCTCTGC TGGGCCACTGAGACAGATGGCTGTCCGCTTTGAGGCTCTGC < 41bp 1 0.110648837272191 1 0.0405034720897675 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C2orf72 ENSG00000204128 UTR3 Human protein_coding chr2:231912019 chr2:231912001 . . 0 3 hm5C_associated_SNPs_4143 0 0 1 EIF3H POSTAR2 ENCODE chr2:231911980-231912019
64251 chr2 233671277 233671277 1 + G A rs114498122 233671297 + 233671277 233671317 41 GTGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAA ATGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAA < 41bp 1 0.203210254306637 1 0.211855113506317 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671297 chr2:233671277 synonymous SNV . 0 1 hm5C_associated_SNPs_4147 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:233671260-233671280
64251 chr2 233671292 233671292 1 + C T rs114460769 233671297 + 233671277 233671317 41 GTGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAA GTGTGATGAAAGCTTTCAACCTCTTGGCGATATCATGAAAA < 41bp 1 0.225664464369257 1 0.165565520524979 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671297 chr2:233671292 synonymous SNV . 0 16 hm5C_associated_SNPs_4148 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:233671261-233671303
64251 chr2 233704576 233704576 1 + G A rs149682624 233704582 + 233704562 233704602 41 CCTTCTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGC CCTTCTTCTTCAACATGGGGCCAGCAGTCCAATACAACAGC < 41bp 1 0.0536108142472717 1 0.169875681400299 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704582 chr2:233704576 synonymous SNV . 0 15 hm5C_associated_SNPs_4149 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:233704560-233704580
64251 chr2 233704576 233704576 1 + G A rs149682624 233704586 + 233704566 233704606 41 CTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGCATGT CTTCTTCAACATGGGGCCAGCAGTCCAATACAACAGCATGT < 41bp 1 0.0930985173840776 1 0.646778225898743 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704586 chr2:233704576 synonymous SNV . 0 11 hm5C_associated_SNPs_4150 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:233704560-233704580
64251 chr2 235951001 235951001 1 + G A rs114242502 235950995 + 235950975 235951015 41 TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAGGCCC TGCAGCTGTGGGGGAAGCACCAGTTCATTTTGTCCAGGCCC < 41bp 1 0.230715449712258 1 0.826419055461884 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950995 chr2:235951001 nonsynonymous SNV 0.266 0 27 hm5C_associated_SNPs_4152 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235951000-235951029
64251 chr2 236403319 236403319 1 + G A rs368688283 236403309 + 236403289 236403329 41 CGGCGGCGGGGGGCGCGCGGCTCCGGGCGCGGCGCCTGCAC CGGCGGCGGGGGGCGCGCGGCTCCGGGCGCAGCGCCTGCAC < 41bp 1 0.798660217775728 1 0.887145161628723 experiment 0.402679564448544 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP1 ENSG00000157985 UTR5 Human protein_coding chr2:236403309 chr2:236403319 . . 0 31 hm5C_associated_SNPs_4153 0 0 3 GEMIN5 POSTAR2 ENCODE chr2:236403265-236403343
64251 chr2 236403319 236403319 1 + G A rs368688283 236403321 + 236403301 236403341 41 GCGCGCGGCTCCGGGCGCGGCGCCTGCACCATGAACTACCA GCGCGCGGCTCCGGGCGCAGCGCCTGCACCATGAACTACCA < 41bp 1 0.709480952236732 1 0.455823302268982 experiment 0.581038095526535 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP1 ENSG00000157985 UTR5 Human protein_coding chr2:236403321 chr2:236403319 . . 0 19 hm5C_associated_SNPs_4154 0 0 3 GEMIN5 POSTAR2 ENCODE chr2:236403265-236403343
64251 chr2 236403462 236403462 1 + C T rs8178993 236403477 + 236403457 236403497 41 CAGAACCAGATCCGGGAGCACGTCATCGCCATCGAAGGTGA CAGAATCAGATCCGGGAGCACGTCATCGCCATCGAAGGTGA < 41bp 1 0.401429480365167 1 0.225171446800232 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236403477 chr2:236403462 synonymous SNV . 0 6 hm5C_associated_SNPs_4155 0 0 1 GRWD1 POSTAR2 ENCODE chr2:236403392-236403472
64251 chr2 236817444 236817444 1 + A G rs145394669 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGTCCCGGGGAAGAGGCCACCCCGAGCCACGTCAGCCT < 41bp 1 0.137539967116522 1 0.0724477767944336 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817444 synonymous SNV . 0 10 hm5C_associated_SNPs_4156 0 0 4 DDX24 POSTAR2 ENCODE chr2:236817392-236817470
64251 chr2 236817468 236817468 1 + G A rs189935338 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACATCAGCCT < 41bp 1 0.0959886837631336 1 0.0438587665557861 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817468 synonymous SNV . 0 34 hm5C_associated_SNPs_4157 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:236817467-236817468
64251 chr2 238005476 238005476 1 + C G rs34344319 238005475 + 238005455 238005495 41 TTGAATTTAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAA TTGAATTTAGTTGCAGGGGCCGTGGATGTTTCCTTTAACAA < 41bp 1 0.294277294305964 1 0.412275493144989 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COPS8 ENSG00000198612 CDS Human protein_coding chr2:238005475 chr2:238005476 nonsynonymous SNV 0.745 0 22 hm5C_associated_SNPs_4158 0 0 2 PRPF8 POSTAR2 ENCODE chr2:238005461-238005529
64251 chr2 238600876 238600876 1 + C A rs147121136 238600871 + 238600851 238600891 41 CTTCCACCCCGAGCCCGACTCAGCCCGCGGCCACCTGCGCC CTTCCACCCCGAGCCCGACTCAGCCAGCGGCCACCTGCGCC < 41bp 1 0.681762293633402 1 0.503935039043427 experiment 0.636475412733195 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR5 Human protein_coding chr2:238600871 chr2:238600876 . . 0 26 hm5C_associated_SNPs_4159 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr2:238600867-238600913
64251 chr2 238671536 238671536 1 + A G rs61744755 238671535 + 238671515 238671555 41 CAGGTTGAGTCAAATGAGGTCATGGGTGCACCAGATGACAG CAGGTTGAGTCAAATGAGGTCGTGGGTGCACCAGATGACAG < 41bp 1 0.435182109615299 1 0.552425682544708 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238671535 chr2:238671536 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_4160 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:238671509-238671545
64251 chr2 238688303 238688303 1 + C T rs111776070 238688313 + 238688293 238688333 41 GCGAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCC GCGAGCTTGGTGCTTAGGGGCTCCCGTGCCATGGCTCACCC < 41bp 1 0.378474060143474 1 0.375460475683212 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688313 chr2:238688303 . . 0 11 hm5C_associated_SNPs_4161 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688303 238688303 1 + C T rs111776070 238688315 + 238688295 238688335 41 GAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCA GAGCTTGGTGCTTAGGGGCTCCCGTGCCATGGCTCACCCCA < 41bp 1 0.331017643468684 1 0.292919397354126 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688315 chr2:238688303 . . 0 9 hm5C_associated_SNPs_4162 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688303 238688303 1 + C T rs111776070 238688316 + 238688296 238688336 41 AGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAG AGCTTGGTGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAG < 41bp 1 0.224296995153501 1 0.695445835590363 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688316 chr2:238688303 . . 0 8 hm5C_associated_SNPs_4163 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688303 238688303 1 + C T rs111776070 238688317 + 238688297 238688337 41 GCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG GCTTGGTGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG < 41bp 1 0.514532667377915 1 0.789328694343567 experiment 0.97093466524417 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688317 chr2:238688303 . . 0 7 hm5C_associated_SNPs_4164 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688304 238688304 1 + G A rs138410523 238688313 + 238688293 238688333 41 GCGAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCC GCGAGCTTGGCACTTAGGGGCTCCCGTGCCATGGCTCACCC < 41bp 1 0.333076651946791 1 0.427640616893768 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688313 chr2:238688304 . . 0 12 hm5C_associated_SNPs_4165 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688304 238688304 1 + G A rs138410523 238688315 + 238688295 238688335 41 GAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCA GAGCTTGGCACTTAGGGGCTCCCGTGCCATGGCTCACCCCA < 41bp 1 0.299987015341919 1 0.291239619255066 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688315 chr2:238688304 . . 0 10 hm5C_associated_SNPs_4166 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688304 238688304 1 + G A rs138410523 238688316 + 238688296 238688336 41 AGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAG AGCTTGGCACTTAGGGGCTCCCGTGCCATGGCTCACCCCAG < 41bp 1 0.1706646950102 1 0.463506460189819 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688316 chr2:238688304 . . 0 9 hm5C_associated_SNPs_4167 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688304 238688304 1 + G A rs138410523 238688317 + 238688297 238688337 41 GCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG GCTTGGCACTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG < 41bp 1 0.500136858096598 1 0.757287383079529 experiment 0.999726283806804 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688317 chr2:238688304 . . 0 8 hm5C_associated_SNPs_4168 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688305 238688305 1 + C T rs2117364 238688313 + 238688293 238688333 41 GCGAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCC GCGAGCTTGGCGTTTAGGGGCTCCCGTGCCATGGCTCACCC < 41bp 1 0.373361783483838 1 0.26133131980896 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688313 chr2:238688305 . . 0 13 hm5C_associated_SNPs_4169 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688305 238688305 1 + C T rs2117364 238688315 + 238688295 238688335 41 GAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCA GAGCTTGGCGTTTAGGGGCTCCCGTGCCATGGCTCACCCCA < 41bp 1 0.321397987277596 1 0.336459398269653 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688315 chr2:238688305 . . 0 11 hm5C_associated_SNPs_4170 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688305 238688305 1 + C T rs2117364 238688316 + 238688296 238688336 41 AGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAG AGCTTGGCGTTTAGGGGCTCCCGTGCCATGGCTCACCCCAG < 41bp 1 0.213866016085008 1 0.396739512681961 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688316 chr2:238688305 . . 0 10 hm5C_associated_SNPs_4171 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688305 238688305 1 + C T rs2117364 238688317 + 238688297 238688337 41 GCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG GCTTGGCGTTTAGGGGCTCCCGTGCCATGGCTCACCCCAGG < 41bp 1 0.535736433360783 1 0.63683009147644 experiment 0.928527133278435 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688317 chr2:238688305 . . 0 9 hm5C_associated_SNPs_4172 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688317 238688317 1 + C T rs142787144 238688313 + 238688293 238688333 41 GCGAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCC GCGAGCTTGGCGCTTAGGGGCTCCTGTGCCATGGCTCACCC < 41bp 1 0.482129193524247 1 0.30480819940567 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688313 chr2:238688317 . . 0 25 hm5C_associated_SNPs_4173 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688317 238688317 1 + C T rs142787144 238688315 + 238688295 238688335 41 GAGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCA GAGCTTGGCGCTTAGGGGCTCCTGTGCCATGGCTCACCCCA < 41bp 1 0.152498780382476 1 0.146390855312347 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688315 chr2:238688317 . . 0 23 hm5C_associated_SNPs_4174 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 238688317 238688317 1 + C T rs142787144 238688316 + 238688296 238688336 41 AGCTTGGCGCTTAGGGGCTCCCGTGCCATGGCTCACCCCAG AGCTTGGCGCTTAGGGGCTCCTGTGCCATGGCTCACCCCAG < 41bp 1 0.387328405682779 1 0.446983218193054 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 UTR3 Human protein_coding chr2:238688316 chr2:238688317 . . 0 22 hm5C_associated_SNPs_4175 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238688293-238688318
64251 chr2 239355561 239355561 1 + A G rs2278768 239355557 + 239355537 239355577 41 CGATTAAAGCCTTCTAGTATCTCAATGAAAAGGGAGTTTCG CGATTAAAGCCTTCTAGTATCTCAGTGAAAAGGGAGTTTCG < 41bp 1 0.32843052794493 1 0.433859974145889 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239355557 chr2:239355561 . . 0 25 hm5C_associated_SNPs_4180 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr2:239355542-239355574
64251 chr2 239358852 239358852 1 + A T rs514795 239358848 + 239358828 239358868 41 GGACTGTGGACCCCGATGGGCCAGAGTCCTTGTGGCCCACA GGACTGTGGACCCCGATGGGCCAGTGTCCTTGTGGCCCACA < 41bp 1 0.484006619805103 1 0.200796753168106 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239358848 chr2:239358852 . . 0 25 hm5C_associated_SNPs_4181 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:239358842-239358867
64251 chr2 241406649 241406649 1 + A G rs3792215 241406648 + 241406628 241406668 41 TCAGGGCTCAGAGTGACCCTCAGCTGTCACCTGCTCACAGG TCAGGGCTCAGAGTGACCCTCGGCTGTCACCTGCTCACAGG < 41bp 1 0.729090579424416 1 0.71367084980011 experiment 0.541818841151168 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPC1 ENSG00000063660 UTR3 Human protein_coding chr2:241406648 chr2:241406649 . . 0 22 hm5C_associated_SNPs_4183 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:241406648-241406694
64251 chr2 241500481 241500481 1 + C A rs571403854 241500464 + 241500444 241500484 41 ACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCTGGCGAA ACCGCGTACCTCATGCGGCACCGCGGCCTCAGCCTGGAGAA < 41bp 1 0.466624320790833 1 0.0559470951557159 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DUSP28 ENSG00000188542 CDS Human protein_coding chr2:241500464 chr2:241500481 nonsynonymous SNV 0.002 1 38 hm5C_associated_SNPs_4194 0 0 2 PRPF8 POSTAR2 ENCODE chr2:241500456-241500533
64251 chr2 241514984 241514984 1 + C T rs531855875 241514997 + 241514977 241515017 41 TCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC TCCTGAGTTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC < 41bp 1 0.630739300358941 1 0.243792921304703 experiment 0.738521399282119 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514997 chr2:241514984 synonymous SNV . 0 8 hm5C_associated_SNPs_4195 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr3 4856234 4856234 1 + G A rs901854 4856235 + 4856215 4856255 41 TAGGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA TAGGAGATGTACTCAGGAAACCGTCCAAAGAGGTAAATTAA < 41bp 1 0.0466667053153709 1 0.454815953969955 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4856235 chr3:4856234 synonymous SNV . 0 20 hm5C_associated_SNPs_4197 2 0 2 DDX24 POSTAR2 ENCODE chr3:4856217-4856241
64251 chr3 5026638 5026638 1 + T C rs114360023 5026640 + 5026620 5026660 41 TATTAAAAAGGAAAATGTTTCAGATGTTTATTTGTATAATT TATTAAAAAGGAAAATGTCTCAGATGTTTATTTGTATAATT < 41bp 1 0.220811975823543 1 0.271274238824844 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BHLHE40 ENSG00000134107 UTR3 Human protein_coding chr3:5026640 chr3:5026638 . . 0 19 hm5C_associated_SNPs_4198 0 0 16 WDR33 POSTAR2 GSE61123,GSM1496985 chr3:5026610-5026673
64251 chr3 5229643 5229643 1 + C T rs144177905 5229644 + 5229624 5229664 41 GTCTGAGGAGCCCCGACGGCCCCGCGTCGCCCACCTCGGGG GTCTGAGGAGCCCCGACGGTCCCGCGTCGCCCACCTCGGGG < 41bp 1 0.695135699839245 1 0.112476140260696 experiment 0.609728600321511 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229644 chr3:5229643 nonsynonymous SNV . 0 20 hm5C_associated_SNPs_4199 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229643 5229643 1 + C T rs144177905 5229651 + 5229631 5229671 41 GAGCCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGG GAGCCCCGACGGTCCCGCGTCGCCCACCTCGGGGCCCGTGG < 41bp 1 0.585097972125915 1 0.0973667502403259 experiment 0.82980405574817 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229651 chr3:5229643 nonsynonymous SNV . 0 13 hm5C_associated_SNPs_4200 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229643 5229643 1 + C T rs144177905 5229653 + 5229633 5229673 41 GCCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGC GCCCCGACGGTCCCGCGTCGCCCACCTCGGGGCCCGTGGGC < 41bp 1 0.416609136328687 1 0.184034198522568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229653 chr3:5229643 nonsynonymous SNV . 0 11 hm5C_associated_SNPs_4201 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229643 5229643 1 + C T rs144177905 5229654 + 5229634 5229674 41 CCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGCC CCCCGACGGTCCCGCGTCGCCCACCTCGGGGCCCGTGGGCC < 41bp 1 0.408703404665561 1 0.127132415771484 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229654 chr3:5229643 nonsynonymous SNV . 0 10 hm5C_associated_SNPs_4202 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229643 5229643 1 + C T rs144177905 5229655 + 5229635 5229675 41 CCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGCCG CCCGACGGTCCCGCGTCGCCCACCTCGGGGCCCGTGGGCCG < 41bp 1 0.761567365488468 1 0.109904646873474 experiment 0.476865269023064 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229655 chr3:5229643 nonsynonymous SNV . 0 9 hm5C_associated_SNPs_4203 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229643 + 5229623 5229663 41 CGTCTGAGGAGCCCCGACGGCCCCGCGTCGCCCACCTCGGG CGTCTGAGGAGCCCCGACGGCCCCGCGTCGCACACCTCGGG < 41bp 1 0.623504480685396 1 0.265472263097763 experiment 0.752991038629208 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229643 chr3:5229654 nonsynonymous SNV 0.275 2 32 hm5C_associated_SNPs_4204 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229644 + 5229624 5229664 41 GTCTGAGGAGCCCCGACGGCCCCGCGTCGCCCACCTCGGGG GTCTGAGGAGCCCCGACGGCCCCGCGTCGCACACCTCGGGG < 41bp 1 0.656172142150694 1 0.315932780504227 experiment 0.687655715698611 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229644 chr3:5229654 nonsynonymous SNV 0.275 2 31 hm5C_associated_SNPs_4205 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229651 + 5229631 5229671 41 GAGCCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGG GAGCCCCGACGGCCCCGCGTCGCACACCTCGGGGCCCGTGG < 41bp 1 0.532954627202446 1 0.104568839073181 experiment 0.934090745595108 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229651 chr3:5229654 nonsynonymous SNV 0.275 2 24 hm5C_associated_SNPs_4206 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229653 + 5229633 5229673 41 GCCCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGC GCCCCGACGGCCCCGCGTCGCACACCTCGGGGCCCGTGGGC < 41bp 1 0.686695411593746 1 0.212285667657852 experiment 0.626609176812507 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229653 chr3:5229654 nonsynonymous SNV 0.275 2 22 hm5C_associated_SNPs_4207 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5229654 5229654 1 + C A rs556204754 5229655 + 5229635 5229675 41 CCCGACGGCCCCGCGTCGCCCACCTCGGGGCCCGTGGGCCG CCCGACGGCCCCGCGTCGCACACCTCGGGGCCCGTGGGCCG < 41bp 1 0.755528311644847 1 0.0564606785774231 experiment 0.488943376710305 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229655 chr3:5229654 nonsynonymous SNV 0.275 2 20 hm5C_associated_SNPs_4208 0 0 4 DDX3X POSTAR2 ENCODE chr3:5229619-5229664
64251 chr3 5257732 5257732 1 + A C rs142697440 5257736 + 5257716 5257756 41 TAGGAATTTCTGTGCAACACCTCACCACGTCTGGTTAATCC TAGGAATTTCTGTGCACCACCTCACCACGTCTGGTTAATCC < 41bp 1 0.133510318612494 1 0.0613951683044434 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EDEM1 ENSG00000134109 UTR3 Human protein_coding chr3:5257736 chr3:5257732 . . 0 17 hm5C_associated_SNPs_4209 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:5257720-5257740
64251 chr3 5257734 5257734 1 + A G rs190594528 5257736 + 5257716 5257756 41 TAGGAATTTCTGTGCAACACCTCACCACGTCTGGTTAATCC TAGGAATTTCTGTGCAACGCCTCACCACGTCTGGTTAATCC < 41bp 1 0.123051560090544 1 0.0568059384822845 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EDEM1 ENSG00000134109 UTR3 Human protein_coding chr3:5257736 chr3:5257734 . . 0 19 hm5C_associated_SNPs_4210 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:5257720-5257740
64251 chr3 5257744 5257744 1 + G A rs79714971 5257736 + 5257716 5257756 41 TAGGAATTTCTGTGCAACACCTCACCACGTCTGGTTAATCC TAGGAATTTCTGTGCAACACCTCACCACATCTGGTTAATCC < 41bp 1 0.145505995273712 1 0.0528227090835571 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EDEM1 ENSG00000134109 UTR3 Human protein_coding chr3:5257736 chr3:5257744 . . 0 29 hm5C_associated_SNPs_4211 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:5257729-5257758
64251 chr3 9439541 9439541 1 + C G rs368108766 9439545 + 9439525 9439565 41 CCCCACCTCACGGGTACGGGCCATTCCCGGCCAGGAAACGC CCCCACCTCACGGGTAGGGGCCATTCCCGGCCAGGAAACGC < 41bp 1 0.0779726921632048 1 0.0174644291400909 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000206573 ncRNA_intronic Human antisense chr3:9439545 chr3:9439541 . . 0 17 hm5C_associated_SNPs_4213 0 0 13 EIF3D POSTAR2 GSE65004,GSM1585670 chr3:9439508-9439546
64251 chr3 9517870 9517870 1 + G A rs529596973 9517850 + 9517830 9517870 41 GCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAACG GCTGCCTCTGGAACCTAGGCCGAGCATATTGCTGAGGAACA < 41bp 1 0.381247692037853 1 0.433860510587692 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD5 ENSG00000168137 UTR3 Human protein_coding chr3:9517850 chr3:9517870 . . 0 41 hm5C_associated_SNPs_4214 0 0 24 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:9517853-9517877
64251 chr3 9518807 9518807 1 + G C rs17081119 9518819 + 9518799 9518839 41 GTGATTGTGTGTGGGCCTGCCCCACATTTCTCTGGGGGATG GTGATTGTCTGTGGGCCTGCCCCACATTTCTCTGGGGGATG < 41bp 1 0.13554200615385 1 0.110848069190979 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SETD5 ENSG00000168137 UTR3 Human protein_coding chr3:9518819 chr3:9518807 . . 0 9 hm5C_associated_SNPs_4215 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:9518680-9518827
64251 chr3 9773468 9773468 1 + G A rs375786132 9773466 + 9773446 9773486 41 TGCTGCCGCCGCCGCTGCCACAGCCTTTGCCGCCACGGTCT TGCTGCCGCCGCCGCTGCCACAACCTTTGCCGCCACGGTCT < 41bp 1 0.398336868922576 1 0.189167231321335 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BRPF1 ENSG00000156983 UTR5 Human protein_coding chr3:9773466 chr3:9773468 . . 0 23 hm5C_associated_SNPs_4216 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:9773460-9773480
64251 chr3 9775887 9775887 1 + C T rs116359925 9775905 + 9775885 9775925 41 TACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAG TATGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAG < 41bp 1 0.444770478167516 1 0.354015231132507 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775905 chr3:9775887 synonymous SNV . 0 3 hm5C_associated_SNPs_4217 0 0 3 RBM15 POSTAR2 ENCODE chr3:9775847-9775902
64251 chr3 9848731 9848731 1 + G A rs41278553 9848717 + 9848697 9848737 41 TGCTCCCACGCTAGCTGTCCCTTTTCTGATTCTGGTGGATC TGCTCCCACGCTAGCTGTCCCTTTTCTGATTCTGATGGATC < 41bp 1 0.0274783226273892 1 0.0163161158561707 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARPC4 ENSG00000241553 UTR3 Human protein_coding chr3:9848717 chr3:9848731 . . 0 35 hm5C_associated_SNPs_4219 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr3:9848703-9848733
64251 chr3 9975108 9975108 1 + C T rs140918692 9975113 + 9975093 9975133 41 CAGACTTCCTGGGGGCCCTGCAGCAGCCTCGCGCCCCGCGT CAGACTTCCTGGGGGTCCTGCAGCAGCCTCGCGCCCCGCGT < 41bp 1 0.793174516559612 1 0.851566314697266 experiment 0.413650966880776 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control IL17RC ENSG00000163702 CDS Human protein_coding chr3:9975113 chr3:9975108 nonsynonymous SNV 0.120 0 16 hm5C_associated_SNPs_4220 0 0 1 LARP4 POSTAR2 ENCODE chr3:9975065-9975147
64251 chr3 10143189 10143189 1 + C T rs552573592 10143190 + 10143170 10143210 41 AGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACGAC AGCGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACGAC < 41bp 1 0.377671384512054 1 0.80147123336792 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FANCD2 ENSG00000144554 UTR3 Human protein_coding chr3:10143190 chr3:10143189 . . 0 20 hm5C_associated_SNPs_4221 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10143133-10143208
64251 chr3 10143189 10143189 1 + C T rs552573592 10143192 + 10143172 10143212 41 CGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACGACAG CGATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACGACAG < 41bp 1 0.477930427506577 1 0.356123507022858 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control FANCD2 ENSG00000144554 UTR3 Human protein_coding chr3:10143192 chr3:10143189 . . 0 18 hm5C_associated_SNPs_4222 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10143133-10143208
64251 chr3 10143189 10143189 1 + C T rs552573592 10143193 + 10143173 10143213 41 GATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGG GATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACGACAGG < 41bp 1 0.525375101721251 1 0.382387489080429 experiment 0.949249796557497 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control FANCD2 ENSG00000144554 UTR3 Human protein_coding chr3:10143193 chr3:10143189 . . 0 17 hm5C_associated_SNPs_4223 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10143133-10143208
64251 chr3 10143189 10143189 1 + C T rs552573592 10143201 + 10143181 10143221 41 TGCCTCAGCCTCCTGAGTAGCTGGGACGACAGGCACATGCC TGCCTCAGTCTCCTGAGTAGCTGGGACGACAGGCACATGCC < 41bp 1 0.758945771022461 1 0.768702507019043 experiment 0.482108457955079 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control FANCD2 ENSG00000144554 UTR3 Human protein_coding chr3:10143201 chr3:10143189 . . 0 9 hm5C_associated_SNPs_4224 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10143133-10143208
64251 chr3 10192672 10192672 1 + G A rs1681669 10192656 + 10192636 10192676 41 GGCGCCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTC GGCGCCATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTC < 41bp 1 0.401074125868792 1 0.258765459060669 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192656 chr3:10192672 . . 0 37 hm5C_associated_SNPs_4236 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192672 10192672 1 + G A rs1681669 10192659 + 10192639 10192679 41 GCCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCACG GCCATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTCACG < 41bp 1 0.0983647474696938 1 0.0541943311691284 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192659 chr3:10192672 . . 0 34 hm5C_associated_SNPs_4237 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192672 10192672 1 + G A rs1681669 10192660 + 10192640 10192680 41 CCATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCACGT CCATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTCACGT < 41bp 1 0.45711905363167 1 0.0926425457000732 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192660 chr3:10192672 . . 0 33 hm5C_associated_SNPs_4238 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192672 10192672 1 + G A rs1681669 10192662 + 10192642 10192682 41 ATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCACGTAA ATCTCGGCTCACTGCAACCTCTGCCTCCTGAGTTCACGTAA < 41bp 1 0.691397166157038 1 0.121399223804474 experiment 0.617205667685924 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192662 chr3:10192672 . . 0 31 hm5C_associated_SNPs_4239 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192672 10192672 1 + G A rs1681669 10192665 + 10192645 10192685 41 TCGGCTCACTGCAACCTCTGCCTCCTGGGTTCACGTAATCC TCGGCTCACTGCAACCTCTGCCTCCTGAGTTCACGTAATCC < 41bp 1 0.0574981900069447 1 0.0970288217067719 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192665 chr3:10192672 . . 0 28 hm5C_associated_SNPs_4240 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192672 10192672 1 + G A rs1681669 10192688 + 10192668 10192708 41 CCTGGGTTCACGTAATCCTCCTGAGTAGCTGGGATTACAGG CCTGAGTTCACGTAATCCTCCTGAGTAGCTGGGATTACAGG < 41bp 1 0.58688216232847 1 0.402793765068054 experiment 0.82623567534306 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192688 chr3:10192672 . . 0 5 hm5C_associated_SNPs_4241 1 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10192661-10192682
64251 chr3 10192830 10192830 1 + G C rs72563745 10192810 + 10192790 10192830 41 CTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGG CTGACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGC < 41bp 1 0.300571476496558 1 0.0451071560382843 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192810 chr3:10192830 . . 0 41 hm5C_associated_SNPs_4242 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:10192820-10192840
64251 chr3 10192830 10192830 1 + G C rs72563745 10192812 + 10192792 10192832 41 GACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGGTG GACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGCTG < 41bp 1 0.364409919407355 1 0.0516096949577332 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192812 chr3:10192830 . . 0 39 hm5C_associated_SNPs_4243 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:10192820-10192840
64251 chr3 10192830 10192830 1 + G C rs72563745 10192813 + 10192793 10192833 41 ACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGGTGG ACCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGCTGG < 41bp 1 0.540408973280966 1 0.292221307754517 experiment 0.919182053438067 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192813 chr3:10192830 . . 0 38 hm5C_associated_SNPs_4244 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:10192820-10192840
64251 chr3 10192830 10192830 1 + G C rs72563745 10192815 + 10192795 10192835 41 CTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGGTGGGA CTCAGGTGATCCGCCCACCTCAGCCTCCCAAAATGCTGGGA < 41bp 1 0.630948977155533 1 0.465561211109161 experiment 0.738102045688935 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VHL ENSG00000134086 UTR3 Human protein_coding chr3:10192815 chr3:10192830 . . 0 36 hm5C_associated_SNPs_4245 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:10192820-10192840
64251 chr3 10284952 10284952 1 + C T rs374774009 10284961 + 10284941 10284981 41 ACTACTGACCTCGTGATCTGCCCGCCTTGGCCTATCAAAGT ACTACTGACCTTGTGATCTGCCCGCCTTGGCCTATCAAAGT < 41bp 1 0.324472801062756 1 0.0582112967967987 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRAK2 ENSG00000134070 UTR3 Human protein_coding chr3:10284961 chr3:10284952 . . 0 12 hm5C_associated_SNPs_4254 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10284945-10284965
64251 chr3 10284952 10284952 1 + C T rs374774009 10284963 + 10284943 10284983 41 TACTGACCTCGTGATCTGCCCGCCTTGGCCTATCAAAGTGT TACTGACCTTGTGATCTGCCCGCCTTGGCCTATCAAAGTGT < 41bp 1 0.414165181658649 1 0.19049996137619 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRAK2 ENSG00000134070 UTR3 Human protein_coding chr3:10284963 chr3:10284952 . . 0 10 hm5C_associated_SNPs_4255 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10284945-10284965
64251 chr3 10284952 10284952 1 + C T rs374774009 10284965 + 10284945 10284985 41 CTGACCTCGTGATCTGCCCGCCTTGGCCTATCAAAGTGTTG CTGACCTTGTGATCTGCCCGCCTTGGCCTATCAAAGTGTTG < 41bp 1 0.0913680311330152 1 0.0911275446414948 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRAK2 ENSG00000134070 UTR3 Human protein_coding chr3:10284965 chr3:10284952 . . 0 8 hm5C_associated_SNPs_4256 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10284945-10284965
64251 chr3 10284952 10284952 1 + C T rs374774009 10284966 + 10284946 10284986 41 TGACCTCGTGATCTGCCCGCCTTGGCCTATCAAAGTGTTGG TGACCTTGTGATCTGCCCGCCTTGGCCTATCAAAGTGTTGG < 41bp 1 0.254573523855758 1 0.0498310029506683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRAK2 ENSG00000134070 UTR3 Human protein_coding chr3:10284966 chr3:10284952 . . 0 7 hm5C_associated_SNPs_4257 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10284945-10284965
64251 chr3 11596296 11596296 1 + G A rs570582042 11596287 + 11596267 11596307 41 CTCCCCTTCTCCATGCAGATCTGGGACATGAGCGATGATGA CTCCCCTTCTCCATGCAGATCTGGGACATAAGCGATGATGA < 41bp 1 0.594407483331401 1 0.654296159744263 experiment 0.811185033337198 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATG7 ENSG00000197548 CDS Human protein_coding chr3:11596287 chr3:11596296 nonsynonymous SNV 0.988 1 30 hm5C_associated_SNPs_4263 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:11596293-11596325
64251 chr3 11596302 11596302 1 + T C rs8154 11596287 + 11596267 11596307 41 CTCCCCTTCTCCATGCAGATCTGGGACATGAGCGATGATGA CTCCCCTTCTCCATGCAGATCTGGGACATGAGCGACGATGA < 41bp 1 0.648273100640423 1 0.603167831897736 experiment 0.703453798719155 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATG7 ENSG00000197548 CDS Human protein_coding chr3:11596287 chr3:11596302 synonymous SNV . 0 36 hm5C_associated_SNPs_4264 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:11596293-11596325
64251 chr3 11598304 11598304 1 + C T rs73812470 11598318 + 11598298 11598338 41 GAATGCCAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAAT GAATGCTAAAGCTTGGAAGCCCAGTACAGTGGGAGTGAAAT < 41bp 1 0.140052516737803 1 0.119079411029816 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATG7;VGLL4 ENSG00000144560;ENSG00000197548 UTR3 Human other chr3:11598318 chr3:11598304 . . 0 7 hm5C_associated_SNPs_4265 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:11598280-11598304
64251 chr3 12531407 12531407 1 + A G rs77258715 12531390 + 12531370 12531410 41 CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTC CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAGTTC < 41bp 1 0.326016168784584 1 0.263193994760513 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12531390 chr3:12531407 synonymous SNV . 0 38 hm5C_associated_SNPs_4267 1 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12531391-12531477
64251 chr3 12574468 12574468 1 + G A rs569680467 12574481 + 12574461 12574501 41 CTCTGGCGTCAGTCTTTTCCCTCATCCACTCACTGGGGAGA CTCTGGCATCAGTCTTTTCCCTCATCCACTCACTGGGGAGA < 41bp 1 0.226986415600732 1 0.145525962114334 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TSEN2 ENSG00000154743 UTR3 Human protein_coding chr3:12574481 chr3:12574468 . . 0 8 hm5C_associated_SNPs_4268 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr3:12574440-12574468
64251 chr3 14183951 14183951 1 + G A rs559809675 14183965 + 14183945 14183985 41 ATCTTTGTAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGT ATCTTTATAGTGTGTGGGATCTCTGAAGGCCCTATTTAAGT < 41bp 1 0.300510393463335 1 0.22804394364357 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM43 ENSG00000170876 UTR3 Human protein_coding chr3:14183965 chr3:14183951 . . 0 7 hm5C_associated_SNPs_4270 1 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:14183908-14184124
64251 chr3 14184719 14184719 1 + T C rs10468 14184725 + 14184705 14184745 41 ATTCAGAAACCGTTTTGTGCCTGCTGGGAGTAATTCCTTTA ATTCAGAAACCGTTCTGTGCCTGCTGGGAGTAATTCCTTTA < 41bp 1 0.557516844888741 1 0.0776461362838745 experiment 0.884966310222517 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM43 ENSG00000170876 UTR3 Human protein_coding chr3:14184725 chr3:14184719 . . 0 15 hm5C_associated_SNPs_4271 2 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:14184700-14184720
64251 chr3 14487265 14487265 1 + C T rs2228585 14487269 + 14487249 14487289 41 TTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTTGGAG TTTTCCTGTTTGGGAGTGGCCTGCCTGTGTTTTTCTTGGAG < 41bp 1 0.360936050271627 1 0.188533633947372 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487269 chr3:14487265 synonymous SNV . 0 17 hm5C_associated_SNPs_4272 0 0 7 BUD13 POSTAR2 ENCODE chr3:14487249-14487364
64251 chr3 14712647 14712647 1 + A C rs139802337 14712656 + 14712636 14712676 41 CAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT CAAGCCCCCACCGTTACTTTCAAAACTCTGGATGACATGAT < 41bp 1 0.480841696411489 1 0.480436950922012 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712656 chr3:14712647 synonymous SNV . 0 12 hm5C_associated_SNPs_4274 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:14712639-14712661
64251 chr3 14989285 14989285 1 + C T rs186068713 14989296 + 14989276 14989316 41 GCGAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACC GCGAGCCCGTGGCCCCCGGGCTCCCGCCATCCGCCGACACC < 41bp 1 0.402286754678638 1 0.0527162253856659 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989296 chr3:14989285 . . 0 10 hm5C_associated_SNPs_4275 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989285 14989285 1 + C T rs186068713 14989298 + 14989278 14989318 41 GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGG GAGCCCGTGGCCCCCGGGCTCCCGCCATCCGCCGACACCGG < 41bp 1 0.451323353091271 1 0.126145571470261 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989298 chr3:14989285 . . 0 8 hm5C_associated_SNPs_4276 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989285 14989285 1 + C T rs186068713 14989299 + 14989279 14989319 41 AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG AGCCCGTGGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG < 41bp 1 0.357792714262295 1 0.127006679773331 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989299 chr3:14989285 . . 0 7 hm5C_associated_SNPs_4277 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989286 14989286 1 + G A rs547567795 14989296 + 14989276 14989316 41 GCGAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACC GCGAGCCCGCAGCCCCCGGGCTCCCGCCATCCGCCGACACC < 41bp 1 0.36603865428463 1 0.0621410608291626 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989296 chr3:14989286 . . 0 11 hm5C_associated_SNPs_4278 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989286 14989286 1 + G A rs547567795 14989298 + 14989278 14989318 41 GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGG GAGCCCGCAGCCCCCGGGCTCCCGCCATCCGCCGACACCGG < 41bp 1 0.378632411301051 1 0.101892471313477 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989298 chr3:14989286 . . 0 9 hm5C_associated_SNPs_4279 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989286 14989286 1 + G A rs547567795 14989299 + 14989279 14989319 41 AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG AGCCCGCAGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG < 41bp 1 0.350935357339004 1 0.156432926654816 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989299 chr3:14989286 . . 0 8 hm5C_associated_SNPs_4280 0 0 3 DDX3X POSTAR2 ENCODE chr3:14989282-14989414
64251 chr3 14989310 14989310 1 + C A rs564563191 14989296 + 14989276 14989316 41 GCGAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACC GCGAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCAGACACC < 41bp 1 0.344822372865134 1 0.0377061069011688 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989296 chr3:14989310 . . 0 35 hm5C_associated_SNPs_4281 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989310 14989310 1 + C A rs564563191 14989298 + 14989278 14989318 41 GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGG GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCAGACACCGG < 41bp 1 0.405756522412861 1 0.0952959656715393 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989298 chr3:14989310 . . 0 33 hm5C_associated_SNPs_4282 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989310 14989310 1 + C A rs564563191 14989299 + 14989279 14989319 41 AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCAGACACCGGG < 41bp 1 0.392267805996529 1 0.168351113796234 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989299 chr3:14989310 . . 0 32 hm5C_associated_SNPs_4283 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989310 14989310 1 + C A rs564563191 14989322 + 14989302 14989342 41 CCATCCGCCGACACCGGGAGCCCGGGCTCCCCGCGCCCTGC CCATCCGCAGACACCGGGAGCCCGGGCTCCCCGCGCCCTGC < 41bp 1 0.716766521305523 1 0.342797994613647 experiment 0.566466957388953 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989322 chr3:14989310 . . 0 9 hm5C_associated_SNPs_4284 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989317 14989317 1 + G A rs533463836 14989298 + 14989278 14989318 41 GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGG GAGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCAG < 41bp 1 0.441297461658637 1 0.161542236804962 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989298 chr3:14989317 . . 0 40 hm5C_associated_SNPs_4285 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989317 14989317 1 + G A rs533463836 14989299 + 14989279 14989319 41 AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCGGG AGCCCGCGGCCCCCGGGCTCCCGCCATCCGCCGACACCAGG < 41bp 1 0.36229014053898 1 0.166013777256012 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989299 chr3:14989317 . . 0 39 hm5C_associated_SNPs_4286 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 14989317 14989317 1 + G A rs533463836 14989322 + 14989302 14989342 41 CCATCCGCCGACACCGGGAGCCCGGGCTCCCCGCGCCCTGC CCATCCGCCGACACCAGGAGCCCGGGCTCCCCGCGCCCTGC < 41bp 1 0.698013977381157 1 0.346778213977814 experiment 0.603972045237686 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989322 chr3:14989317 . . 0 16 hm5C_associated_SNPs_4287 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr3 15247783 15247783 1 + C T rs574656148 15247795 + 15247775 15247815 41 TGGGGCGGCCGGGTGGGCTACAAGCCGGGTCTGGGCTGAGG TGGGGCGGTCGGGTGGGCTACAAGCCGGGTCTGGGCTGAGG < 41bp 1 0.776760904719692 1 0.354212045669556 experiment 0.446478190560616 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN7 ENSG00000131375 UTR5 Human protein_coding chr3:15247795 chr3:15247783 . . 0 9 hm5C_associated_SNPs_4288 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:15247780-15247800
64251 chr3 15247872 15247872 1 + C T rs562855482 15247876 + 15247856 15247896 41 GCGAGCTCTCCTCCACCGTCCAAAGTAAACTTTGCCGCTCC GCGAGCTCTCCTCCACTGTCCAAAGTAAACTTTGCCGCTCC < 41bp 1 0.693426744582599 1 0.729309856891632 experiment 0.613146510834801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control CAPN7 ENSG00000131375 UTR5 Human protein_coding chr3:15247876 chr3:15247872 . . 0 17 hm5C_associated_SNPs_4289 0 0 5 ALKBH5 POSTAR2 GSE38201,GSM936506 chr3:15247852-15247880
64251 chr3 15297570 15297570 1 - C A rs140402906 15297574 - 15297554 15297594 41 GATTCATCCTGGGCCCTGGCCGATGTGCATATCAACATTTA GATTCATCCTGGGCCCTGGCCGATTTGCATATCAACATTTA < 41bp 1 0.13577204427386 1 0.0441830456256866 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP5-AS1 ENSG00000224660 ncRNA_exonic Human antisense chr3:15297574 chr3:15297570 . . 0 25 hm5C_associated_SNPs_4290 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr3:15297549-15297581
64251 chr3 16312564 16312564 1 + C T rs842259 16312562 + 16312542 16312582 41 TGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGA TGACACTCAGCACTTTGCGCCATCTTACTCTAACCAGGTGA < 41bp 1 0.0924857831881103 1 0.0683153569698334 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16312562 chr3:16312564 synonymous SNV . 0 23 hm5C_associated_SNPs_4291 0 0 1 GPKOW POSTAR2 ENCODE chr3:16312557-16312611
64251 chr3 20019806 20019806 1 + C T rs200242114 20019825 + 20019805 20019845 41 GCACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA GTACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA < 41bp 1 0.465192667060081 1 0.120863735675812 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019825 chr3:20019806 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_4293 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:20019801-20019847
64251 chr3 23958648 23958648 1 + C T rs34200392 23958644 + 23958624 23958664 41 GGAGTACAGCTCTTTCCTTTCCGTCTGGCGGCAGCCATCAG GGAGTACAGCTCTTTCCTTTCCGTTTGGCGGCAGCCATCAG < 41bp 1 0.381460523596803 1 0.0795766413211823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RPL15 ENSG00000174748 UTR5 Human protein_coding chr3:23958644 chr3:23958648 . . 0 25 hm5C_associated_SNPs_4294 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:23958628-23958727
64251 chr3 23960001 23960001 1 + C T rs35608037 23959994 + 23959974 23960014 41 ACGCCCAGTTCCTAAGGGTGCAACTTACGGCAAGCCTGTCC ACGCCCAGTTCCTAAGGGTGCAACTTATGGCAAGCCTGTCC < 41bp 1 0.387146144635767 1 0.0788879692554474 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL15 ENSG00000174748 CDS Human protein_coding chr3:23959994 chr3:23960001 synonymous SNV . 0 28 hm5C_associated_SNPs_4295 0 0 1 YBX3 POSTAR2 ENCODE chr3:23959990-23960048
64251 chr3 23986820 23986820 1 + G A rs184000561 23986826 + 23986806 23986846 41 GGCTGCAGGAAGCCGCCGCGCCGCCGCTTTTGTTGTCAGGG GGCTGCAGGAAGCCACCGCGCCGCCGCTTTTGTTGTCAGGG < 41bp 1 0.392750883823701 1 0.404692828655243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR1D2 ENSG00000174738 UTR5 Human protein_coding chr3:23986826 chr3:23986820 . . 0 15 hm5C_associated_SNPs_4303 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:23986800-23986820
64251 chr3 31674561 31674561 1 + A G rs140420950 31674578 + 31674558 31674598 41 AGCACCTGATAACAGGGAGACATTAGATCACAAACCTCGAG AGCGCCTGATAACAGGGAGACATTAGATCACAAACCTCGAG < 41bp 1 0.232034257422413 1 0.233586996793747 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STT3B ENSG00000163527 CDS Human protein_coding chr3:31674578 chr3:31674561 synonymous SNV . 0 4 hm5C_associated_SNPs_4304 1 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:31674540-31674580
64251 chr3 32209560 32209560 1 + G A rs373602669 32209573 + 32209553 32209593 41 GTTTTGCGTATTTTCATCTGCATTCAGCTTCTTACTCTGGG GTTTTGCATATTTTCATCTGCATTCAGCTTCTTACTCTGGG < 41bp 1 0.0522453332000827 1 0.0291353166103363 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPD1L ENSG00000152642 UTR3 Human protein_coding chr3:32209573 chr3:32209560 . . 0 8 hm5C_associated_SNPs_4305 1 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr3:32209533-32209577
64251 chr3 32280390 32280390 1 + G A rs28379932 32280370 + 32280350 32280390 41 CGCGCGGGCCGCGCTCCCCTCCCCCGCGCCTGTGTCCCCAG CGCGCGGGCCGCGCTCCCCTCCCCCGCGCCTGTGTCCCCAA < 41bp 1 0.472010361106731 1 0.243815898895264 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CMTM8 ENSG00000170293 UTR5 Human protein_coding chr3:32280370 chr3:32280390 . . 0 41 hm5C_associated_SNPs_4306 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:32280383-32280411
64251 chr3 32433353 32433353 1 + C A rs572660378 32433362 + 32433342 32433382 41 TGTATCTGGCCCCTGGGCAGCTGCCCGGGGAGGCGGCCAGC TGTATCTGGCCACTGGGCAGCTGCCCGGGGAGGCGGCCAGC < 41bp 1 0.696887274371821 1 0.21127912402153 experiment 0.606225451256359 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMTM7 ENSG00000153551 UTR5 Human protein_coding chr3:32433362 chr3:32433353 . . 0 12 hm5C_associated_SNPs_4308 0 0 1 DDX3X POSTAR2 ENCODE chr3:32433349-32433432
64251 chr3 32495950 32495950 1 + G A rs114577010 32495966 + 32495946 32495986 41 TTCCGGGGAGAACATCCCTCCCATTCTGGGAAAGGAAAGCA TTCCAGGGAGAACATCCCTCCCATTCTGGGAAAGGAAAGCA < 41bp 1 0.103751265555295 1 0.0538241267204285 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32495966 chr3:32495950 nonsynonymous SNV 0.000 1 5 hm5C_associated_SNPs_4309 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32495904-32495997
64251 chr3 33155563 33155563 1 + G A rs534679571 33155562 + 33155542 33155582 41 CCTTCCTTCCTTCCTTTCGCCGGGCGCGATGGAGCCGGGGC CCTTCCTTCCTTCCTTTCGCCAGGCGCGATGGAGCCGGGGC < 41bp 1 0.672405225422893 1 0.843590199947357 experiment 0.655189549154215 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CRTAP ENSG00000170275 UTR5 Human protein_coding chr3:33155562 chr3:33155563 . . 0 22 hm5C_associated_SNPs_4310 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:33155537-33155567
64251 chr3 33155563 33155563 1 + G A rs534679571 33155568 + 33155548 33155588 41 TTCCTTCCTTTCGCCGGGCGCGATGGAGCCGGGGCGCCGGG TTCCTTCCTTTCGCCAGGCGCGATGGAGCCGGGGCGCCGGG < 41bp 1 0.609605624425131 1 0.495652139186859 experiment 0.780788751149738 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CRTAP ENSG00000170275 UTR5 Human protein_coding chr3:33155568 chr3:33155563 . . 0 16 hm5C_associated_SNPs_4311 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:33155537-33155567
64251 chr3 33183947 33183947 1 + G A rs145383822 33183934 + 33183914 33183954 41 CTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA CTCTTGGAACTGGAGGAGACCAGCTAGCCCACAACAACCAA < 41bp 1 0.390905819395777 1 0.14238053560257 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTAP ENSG00000170275 UTR3 Human protein_coding chr3:33183934 chr3:33183947 . . 0 34 hm5C_associated_SNPs_4312 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:33183940-33183960
64251 chr3 33906737 33906737 1 + T C rs74450908 33906745 + 33906725 33906765 41 TTTCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTC TTTCTTATAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTC < 41bp 1 0.384144591186833 1 0.150980204343796 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906745 chr3:33906737 synonymous SNV . 0 13 hm5C_associated_SNPs_4314 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906746 + 33906726 33906766 41 TTCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCC TTCTTATAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCC < 41bp 1 0.122735272343366 1 0.156276643276215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906746 chr3:33906737 synonymous SNV . 0 12 hm5C_associated_SNPs_4315 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906747 + 33906727 33906767 41 TCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCA TCTTATAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCA < 41bp 1 0.342337913384565 1 0.17132967710495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906747 chr3:33906737 synonymous SNV . 0 11 hm5C_associated_SNPs_4316 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906750 + 33906730 33906770 41 TATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCA TATAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCA < 41bp 1 0.126365842217217 1 0.141971617937088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906750 chr3:33906737 synonymous SNV . 0 8 hm5C_associated_SNPs_4317 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906751 + 33906731 33906771 41 ATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCAC ATAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCAC < 41bp 1 0.609126175470879 1 0.316900044679642 experiment 0.781747649058242 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906751 chr3:33906737 synonymous SNV . 0 7 hm5C_associated_SNPs_4318 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906752 + 33906732 33906772 41 TAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACC TAGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACC < 41bp 1 0.194717135440618 1 0.236248970031738 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906752 chr3:33906737 synonymous SNV . 0 6 hm5C_associated_SNPs_4319 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906753 + 33906733 33906773 41 AGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCT AGCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCT < 41bp 1 0.188383022399368 1 0.183061480522156 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906753 chr3:33906737 synonymous SNV . 0 5 hm5C_associated_SNPs_4320 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906737 33906737 1 + T C rs74450908 33906754 + 33906734 33906774 41 GCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCTG GCCCACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCTG < 41bp 1 0.406783764399216 1 0.319036662578583 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906754 chr3:33906737 synonymous SNV . 0 4 hm5C_associated_SNPs_4321 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 37090070 37090070 1 + G T rs1800146 37090068 + 37090048 37090088 41 ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA ATGTGCCCCCTTTGGAGGGACTTCCTATCTTCATTCTTCGA < 41bp 1 0.158058012065076 1 0.0351168215274811 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090068 chr3:37090070 synonymous SNV . 0 23 hm5C_associated_SNPs_4322 4 0 1 SND1 POSTAR2 ENCODE chr3:37090048-37090100
64251 chr3 37090074 37090074 1 + A G rs55907433 37090068 + 37090048 37090088 41 ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA ATGTGCCCCCTTTGGAGGGACTGCCTGTCTTCATTCTTCGA < 41bp 1 0.365634652701247 1 0.0487358272075653 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090068 chr3:37090074 nonsynonymous SNV 0.999 2 27 hm5C_associated_SNPs_4323 5 0 1 SND1 POSTAR2 ENCODE chr3:37090048-37090100
64251 chr3 37336478 37336478 1 + A G rs202188013 37336473 + 37336453 37336493 41 ATCATTTTATGTTTTAGGAGCTCCAAATGGACCAGCAGGCA ATCATTTTATGTTTTAGGAGCTCCAGATGGACCAGCAGGCA < 41bp 1 0.362350181167529 1 0.609057486057281 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37336473 chr3:37336478 synonymous SNV . 0 26 hm5C_associated_SNPs_4324 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:37336460-37336480
64251 chr3 37367159 37367159 1 + A C rs113184679 37367140 + 37367120 37367160 41 CTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAG CTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTACG < 41bp 1 0.243593644414961 1 0.0771792829036713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367140 chr3:37367159 nonsynonymous SNV 0.395 2 40 hm5C_associated_SNPs_4325 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 37367159 37367159 1 + A C rs113184679 37367142 + 37367122 37367162 41 AGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGA AGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTACGGA < 41bp 1 0.0491907963453533 1 0.147824764251709 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367142 chr3:37367159 nonsynonymous SNV 0.395 2 38 hm5C_associated_SNPs_4326 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 37367159 37367159 1 + A C rs113184679 37367147 + 37367127 37367167 41 TTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCAC TTCTCATTGTCAGCACCGTACAACTAAAGTTACGGAGGCAC < 41bp 1 0.13089126135015 1 0.0814597606658936 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367147 chr3:37367159 nonsynonymous SNV 0.395 2 33 hm5C_associated_SNPs_4327 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 37367159 37367159 1 + A C rs113184679 37367150 + 37367130 37367170 41 TCATTGTCAGCACCGTACAACTAAAGTTAAGGAGGCACTGT TCATTGTCAGCACCGTACAACTAAAGTTACGGAGGCACTGT < 41bp 1 0.300740094032057 1 0.121204018592834 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367150 chr3:37367159 nonsynonymous SNV 0.395 2 30 hm5C_associated_SNPs_4328 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 37367159 37367159 1 + A C rs113184679 37367165 + 37367145 37367185 41 TACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCA TACAACTAAAGTTACGGAGGCACTGTTAATTAAAACTTGCA < 41bp 1 0.0748248255705317 1 0.174722135066986 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367165 chr3:37367159 nonsynonymous SNV 0.395 2 15 hm5C_associated_SNPs_4329 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 37367159 37367159 1 + A C rs113184679 37367167 + 37367147 37367187 41 CAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACA CAACTAAAGTTACGGAGGCACTGTTAATTAAAACTTGCACA < 41bp 1 0.097765009165558 1 0.0587469339370728 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367167 chr3:37367159 nonsynonymous SNV 0.395 2 13 hm5C_associated_SNPs_4330 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37367131-37367165
64251 chr3 38022316 38022316 1 + G A rs116504860 38022310 + 38022290 38022330 41 CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAG CCCTTCTTTGAGGGCCTGAGCCGGGAAGACGACGTGTACAG < 41bp 1 0.763698706896472 1 0.610225915908813 experiment 0.472602586207055 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022310 chr3:38022316 synonymous SNV . 0 27 hm5C_associated_SNPs_4331 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022293-38022327
64251 chr3 38183379 38183379 1 + C G rs56269210 38183391 + 38183371 38183411 41 CAAGGAGACCCCACCTTGAGCCTTATTTCCTAATGGGTCCA CAAGGAGAGCCCACCTTGAGCCTTATTTCCTAATGGGTCCA < 41bp 1 0.151038898913906 1 0.0391299724578857 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYD88 ENSG00000172936 UTR3 Human protein_coding chr3:38183391 chr3:38183379 . . 0 9 hm5C_associated_SNPs_4332 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:38183351-38183404
64251 chr3 38524742 38524742 1 + C T rs1046048 38524735 + 38524715 38524755 41 GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGG GGTGTCCCTGATTCGGAGGTCGGTCAATGGCACTACCTCGG < 41bp 1 0.232187464498895 1 0.324655801057816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524735 chr3:38524742 synonymous SNV . 0 28 hm5C_associated_SNPs_4333 2 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr3 39452577 39452577 1 + A G rs188790952 39452562 + 39452542 39452582 41 TCCTGTGCACATTGTTAGAGCTTGGAGTTGAGGCTACTGAC TCCTGTGCACATTGTTAGAGCTTGGAGTTGAGGCTGCTGAC < 41bp 1 0.320550997991852 1 0.319531857967377 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452562 chr3:39452577 . . 0 36 hm5C_associated_SNPs_4335 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:39452522-39452583
64251 chr3 39452577 39452577 1 + A G rs188790952 39452596 + 39452576 39452616 41 TACTGACTGGCCGATGAACTCGCAAGTGTAGGTAGTGTGCT TGCTGACTGGCCGATGAACTCGCAAGTGTAGGTAGTGTGCT < 41bp 1 0.733521166031084 1 0.221004247665405 experiment 0.532957667937832 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452596 chr3:39452577 . . 0 2 hm5C_associated_SNPs_4336 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:39452522-39452583
64251 chr3 39452676 39452676 1 + G C rs139033405 39452660 + 39452640 39452680 41 ACACCACAAGGGTCTCTGGCCCAATGAGTGGAGTTTGATAG ACACCACAAGGGTCTCTGGCCCAATGAGTGGAGTTTCATAG < 41bp 1 0.0825082664366375 1 0.0682356357574463 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452660 chr3:39452676 . . 0 37 hm5C_associated_SNPs_4337 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:39452660-39452680
64251 chr3 39452676 39452676 1 + G C rs139033405 39452690 + 39452670 39452710 41 GAGTTTGATAGTAATTCTTGCTACAAGTATAACATTACTGC GAGTTTCATAGTAATTCTTGCTACAAGTATAACATTACTGC < 41bp 1 0.251580322075807 1 0.524475276470184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452690 chr3:39452676 . . 0 7 hm5C_associated_SNPs_4338 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:39452660-39452680
64251 chr3 39452676 39452676 1 + G C rs139033405 39452693 + 39452673 39452713 41 TTTGATAGTAATTCTTGCTACAAGTATAACATTACTGCATG TTTCATAGTAATTCTTGCTACAAGTATAACATTACTGCATG < 41bp 1 0.326370630110404 1 0.36085045337677 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA62 ENSG00000202363 ncRNA_exonic Human snoRNA chr3:39452693 chr3:39452676 . . 0 4 hm5C_associated_SNPs_4339 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:39452660-39452680
64251 chr3 40498845 40498845 1 + C T rs2276868 40498829 + 40498809 40498849 41 AGGGTTGGGCGGGTCTTCTTCCTTCTCGCCTAACGCCGCCA AGGGTTGGGCGGGTCTTCTTCCTTCTCGCCTAACGCTGCCA < 41bp 1 0.0679884081784402 1 0.069646418094635 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL14 ENSG00000188846 UTR5 Human protein_coding chr3:40498829 chr3:40498845 . . 0 37 hm5C_associated_SNPs_4340 0 0 8 DDX3X POSTAR2 ENCODE chr3:40498826-40498851
64251 chr3 40498920 40498920 1 + A T rs2276869 40498931 + 40498911 40498951 41 TCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTC TCCGCTGGGTAGCTGAGGCGCCAAACGGCTCCCAGAGGGTC < 41bp 1 0.563750198513686 1 0.178496122360229 experiment 0.872499602972629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL14 ENSG00000188846 UTR5 Human protein_coding chr3:40498931 chr3:40498920 . . 0 10 hm5C_associated_SNPs_4341 0 0 3 BUD13 POSTAR2 ENCODE chr3:40498873-40498922
64251 chr3 40498920 40498920 1 + A T rs2276869 40498932 + 40498912 40498952 41 CCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCC CCGCTGGGTAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCC < 41bp 1 0.5195973118813 1 0.218872845172882 experiment 0.9608053762374 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL14 ENSG00000188846 UTR5 Human protein_coding chr3:40498932 chr3:40498920 . . 0 9 hm5C_associated_SNPs_4342 0 0 3 BUD13 POSTAR2 ENCODE chr3:40498873-40498922
64251 chr3 40498933 40498933 1 + A G rs4973904 40498931 + 40498911 40498951 41 TCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTC TCCGCTGGGAAGCTGAGGCGCCGAACGGCTCCCAGAGGGTC < 41bp 1 0.655587590175306 1 0.259960770606995 experiment 0.688824819649387 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL14 ENSG00000188846 UTR5 Human protein_coding chr3:40498931 chr3:40498933 . . 0 23 hm5C_associated_SNPs_4343 0 0 1 NCBP2 POSTAR2 ENCODE chr3:40498859-40498941
64251 chr3 40498933 40498933 1 + A G rs4973904 40498932 + 40498912 40498952 41 CCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCC CCGCTGGGAAGCTGAGGCGCCGAACGGCTCCCAGAGGGTCC < 41bp 1 0.557139485586457 1 0.21683669090271 experiment 0.885721028827085 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL14 ENSG00000188846 UTR5 Human protein_coding chr3:40498932 chr3:40498933 . . 0 22 hm5C_associated_SNPs_4344 0 0 1 NCBP2 POSTAR2 ENCODE chr3:40498859-40498941
64251 chr3 40499415 40499415 1 + C T rs181009417 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGCCGGGTGGTCTATGTCTCCTTTGGACCTCATGCCGGAAA < 41bp 1 0.403078742049718 1 0.0536520481109619 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499415 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_4345 0 0 1 UCHL5 POSTAR2 ENCODE chr3:40499383-40499423
64251 chr3 40499445 40499445 1 + A G rs35187187 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAG < 41bp 1 0.408900064285162 1 0.0547160804271698 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499445 nonsynonymous SNV 0.910 0 41 hm5C_associated_SNPs_4346 0 0 3 GEMIN5 POSTAR2 ENCODE chr3:40499436-40499478
64251 chr3 40503506 40503506 1 + C T rs148931839 40503488 + 40503468 40503508 41 AAAGGCAGCTCTCCTGAAAGCTTCTCCCAAAAAAGCACCTG AAAGGCAGCTCTCCTGAAAGCTTCTCCCAAAAAAGCACTTG < 41bp 1 0.202316407239591 1 0.14392501115799 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40503488 chr3:40503506 nonsynonymous SNV 0.543 1 39 hm5C_associated_SNPs_4348 0 0 1 GRWD1 POSTAR2 ENCODE chr3:40503503-40503604
64251 chr3 40574890 40574890 1 + C G rs184243754 40574873 + 40574853 40574893 41 AACACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAA AACACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAA < 41bp 1 0.255771039952342 1 0.337823390960693 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574873 chr3:40574890 . . 0 38 hm5C_associated_SNPs_4349 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574874 + 40574854 40574894 41 ACACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAAA ACACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAAA < 41bp 1 0.5288864196109 1 0.356612890958786 experiment 0.942227160778199 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574874 chr3:40574890 . . 0 37 hm5C_associated_SNPs_4350 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574876 + 40574856 40574896 41 ACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAAAGT ACCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAAAGT < 41bp 1 0.1081125876601 1 0.124269425868988 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574876 chr3:40574890 . . 0 35 hm5C_associated_SNPs_4351 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574877 + 40574857 40574897 41 CCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAAAGTG CCTGACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAAAGTG < 41bp 1 0.42839762394992 1 0.264772653579712 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574877 chr3:40574890 . . 0 34 hm5C_associated_SNPs_4352 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574880 + 40574860 40574900 41 GACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAAAGTGCTG GACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAAAGTGCTG < 41bp 1 0.0972934299301704 1 0.154568403959274 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574880 chr3:40574890 . . 0 31 hm5C_associated_SNPs_4353 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574881 + 40574861 40574901 41 ACCTCAAGTGATCCGCCTGCCTTGGCCCCCCAAAGTGCTGG ACCTCAAGTGATCCGCCTGCCTTGGCCCCGCAAAGTGCTGG < 41bp 1 0.532425370394879 1 0.108994394540787 experiment 0.935149259210241 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574881 chr3:40574890 . . 0 30 hm5C_associated_SNPs_4354 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574886 + 40574866 40574906 41 AAGTGATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTA AAGTGATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTA < 41bp 1 0.353947417140355 1 0.202188968658447 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574886 chr3:40574890 . . 0 25 hm5C_associated_SNPs_4355 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574887 + 40574867 40574907 41 AGTGATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTAC AGTGATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTAC < 41bp 1 0.277351468346325 1 0.225810915231705 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574887 chr3:40574890 . . 0 24 hm5C_associated_SNPs_4356 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574888 + 40574868 40574908 41 GTGATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTACA GTGATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTACA < 41bp 1 0.428203422247502 1 0.258544087409973 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574888 chr3:40574890 . . 0 23 hm5C_associated_SNPs_4357 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574889 + 40574869 40574909 41 TGATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTACAG TGATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTACAG < 41bp 1 0.570021161005092 1 0.443449139595032 experiment 0.859957677989817 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574889 chr3:40574890 . . 0 22 hm5C_associated_SNPs_4358 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40574890 40574890 1 + C G rs184243754 40574891 + 40574871 40574911 41 ATCCGCCTGCCTTGGCCCCCCAAAGTGCTGGGATTACAGGA ATCCGCCTGCCTTGGCCCCGCAAAGTGCTGGGATTACAGGA < 41bp 1 0.514074192236841 1 0.433186411857605 experiment 0.971851615526318 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40574891 chr3:40574890 . . 0 20 hm5C_associated_SNPs_4359 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr3:40574889-40574890
64251 chr3 40576679 40576679 1 + T C rs551410199 40576676 + 40576656 40576696 41 CCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC CCAACTTGAGTTCGGAAGGGCTGCGGCCACCTCGTTTCGCC < 41bp 1 0.661890919492973 1 0.459399312734604 experiment 0.676218161014055 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40576676 chr3:40576679 . . 0 24 hm5C_associated_SNPs_4360 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:40576603-40576697
64251 chr3 40576685 40576685 1 + C T rs193091903 40576676 + 40576656 40576696 41 CCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC CCAACTTGAGTTCGGAAGGGCTGTGGCCATCTCGTTTCGCC < 41bp 1 0.419469447435672 1 0.250703871250153 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40576676 chr3:40576685 . . 0 30 hm5C_associated_SNPs_4361 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:40576603-40576697
64251 chr3 40576688 40576688 1 + C T rs570435131 40576676 + 40576656 40576696 41 CCAACTTGAGTTCGGAAGGGCTGTGGCCACCTCGTTTCGCC CCAACTTGAGTTCGGAAGGGCTGTGGCCACCTTGTTTCGCC < 41bp 1 0.46744580893602 1 0.346375793218613 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40576676 chr3:40576688 . . 0 33 hm5C_associated_SNPs_4362 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:40576603-40576697
64251 chr3 41275106 41275106 1 + T C rs4135379 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGCTGGAATTCTCTCTAACCTCACTTGCAAT < 41bp 1 0.281525328102292 1 0.355161786079407 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275106 synonymous SNV . 0 23 hm5C_associated_SNPs_4363 1 0 32 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr3 43732440 43732440 1 + T A rs375436268 43732441 + 43732421 43732461 41 GGGCGGCCCAGTCGGCCTGTCAGCCGGCTTCGAGATAAGTC GGGCGGCCCAGTCGGCCTGACAGCCGGCTTCGAGATAAGTC < 41bp 1 0.666623968533903 1 0.385254472494125 experiment 0.666752062932193 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABHD5 ENSG00000011198 UTR5 Human protein_coding chr3:43732441 chr3:43732440 . . 0 20 hm5C_associated_SNPs_4366 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:43732439-43732440
64251 chr3 43732461 43732461 1 + C A rs189850893 43732441 + 43732421 43732461 41 GGGCGGCCCAGTCGGCCTGTCAGCCGGCTTCGAGATAAGTC GGGCGGCCCAGTCGGCCTGTCAGCCGGCTTCGAGATAAGTA < 41bp 1 0.685611781874315 1 0.38724946975708 experiment 0.62877643625137 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABHD5 ENSG00000011198 UTR5 Human protein_coding chr3:43732441 chr3:43732461 . . 0 41 hm5C_associated_SNPs_4367 0 0 1 DDX3X POSTAR2 ENCODE chr3:43732441-43732498
64251 chr3 44442775 44442775 1 + T C rs191875479 44442795 + 44442775 44442815 41 TTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA CTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA < 41bp 1 0.313550079814391 1 0.199618399143219 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCAIM ENSG00000179152 CDS Human protein_coding chr3:44442795 chr3:44442775 nonsynonymous SNV 0.770 4 1 hm5C_associated_SNPs_4368 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:44442773-44442797
64251 chr3 44692552 44692552 1 + C T rs369773417 44692544 + 44692524 44692564 41 GCCCAGCTATAGGAGTTCCCCTGCTGAGCAGAGAAGATGAC GCCCAGCTATAGGAGTTCCCCTGCTGAGTAGAGAAGATGAC < 41bp 1 0.593915110580319 1 0.161522895097733 experiment 0.812169778839362 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF35 ENSG00000236869 ncRNA_intronic Human antisense chr3:44692544 chr3:44692552 . . 0 29 hm5C_associated_SNPs_4369 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:44692532-44692552
64251 chr3 44692564 44692564 1 + C A rs2272044 44692544 + 44692524 44692564 41 GCCCAGCTATAGGAGTTCCCCTGCTGAGCAGAGAAGATGAC GCCCAGCTATAGGAGTTCCCCTGCTGAGCAGAGAAGATGAA < 41bp 1 0.593053340881949 1 0.186696082353592 experiment 0.813893318236103 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44692544 chr3:44692564 nonsynonymous SNV 0.999 2 41 hm5C_associated_SNPs_4370 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:44692532-44692568
64251 chr3 45043095 45043095 1 + T C rs34376719 45043087 + 45043067 45043107 41 CCATTGCTGTAAAGGCTGCTCTCTTCAATACAAGGTAAGTC CCATTGCTGTAAAGGCTGCTCTCTTCAACACAAGGTAAGTC < 41bp 1 0.205565789218855 1 0.116656422615051 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45043087 chr3:45043095 synonymous SNV . 0 29 hm5C_associated_SNPs_4373 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr3:45043046-45043096
64251 chr3 45565515 45565515 1 + C T rs533890419 45565503 + 45565483 45565523 41 CCTTAGCAAGCCTCTCAGAGCGTCATTCTCCACAGCCCCGA CCTTAGCAAGCCTCTCAGAGCGTCATTCTCCATAGCCCCGA < 41bp 1 0.554283915562806 1 0.0790659785270691 experiment 0.891432168874388 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45565503 chr3:45565515 synonymous SNV . 0 33 hm5C_associated_SNPs_4374 0 0 1 U2AF2 POSTAR2 ENCODE chr3:45565472-45565543
64251 chr3 45589702 45589702 1 + T C rs267267 45589719 + 45589699 45589739 41 GGATGTGCCTCCCAGGCCTGCTGTGGTTCTGACACACAGGA GGACGTGCCTCCCAGGCCTGCTGTGGTTCTGACACACAGGA < 41bp 1 0.56494374434798 1 0.340804755687714 experiment 0.87011251130404 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARS2 ENSG00000011376 UTR3 Human protein_coding chr3:45589719 chr3:45589702 . . 0 4 hm5C_associated_SNPs_4375 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:45589691-45589712
64251 chr3 47041759 47041759 1 + G A rs139822454 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCACCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC < 41bp 1 0.374112464117829 1 0.492101550102234 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041759 synonymous SNV . 0 7 hm5C_associated_SNPs_4376 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:47041729-47041765
64251 chr3 47041774 47041774 1 + G A rs115350407 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCGCCACTGGATGGGCCACGGCCCTTTCCTGCTGCTC < 41bp 1 0.316654990383971 1 0.339733809232712 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041774 synonymous SNV . 0 22 hm5C_associated_SNPs_4377 0 0 1 RBM15 POSTAR2 ENCODE chr3:47041760-47041825
64251 chr3 47041777 47041777 1 + G A rs199842407 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCGCCACTGGATGGGCCGCGACCCTTTCCTGCTGCTC < 41bp 1 0.483997862090656 1 0.552391111850739 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041777 synonymous SNV . 0 25 hm5C_associated_SNPs_4378 0 0 2 RBM15 POSTAR2 ENCODE chr3:47041775-47041821
64251 chr3 47050988 47050988 1 + T C rs529229466 47051000 + 47050980 47051020 41 GGCGGAAGTCCCGCCCCTCGCCGGCTGAGGGGCCGCCCTGA GGCGGAAGCCCCGCCCCTCGCCGGCTGAGGGGCCGCCCTGA < 41bp 1 0.690364065810912 1 0.905068933963776 experiment 0.619271868378175 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 UTR3 Human protein_coding chr3:47051000 chr3:47050988 . . 0 9 hm5C_associated_SNPs_4380 0 0 3 EFTUD2 POSTAR2 ENCODE chr3:47050988-47051034
64251 chr3 47050989 47050989 1 + C A rs111271184 47051000 + 47050980 47051020 41 GGCGGAAGTCCCGCCCCTCGCCGGCTGAGGGGCCGCCCTGA GGCGGAAGTACCGCCCCTCGCCGGCTGAGGGGCCGCCCTGA < 41bp 1 0.685570235839911 1 0.889128088951111 experiment 0.628859528320177 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 UTR3 Human protein_coding chr3:47051000 chr3:47050989 . . 0 10 hm5C_associated_SNPs_4381 1 0 3 EFTUD2 POSTAR2 ENCODE chr3:47050988-47051034
64251 chr3 47382161 47382161 1 + G A rs138603242 47382146 + 47382126 47382166 41 TCCCTCAGCTCCGTGGAGACCTACTCACCTGAGACGGACAA TCCCTCAGCTCCGTGGAGACCTACTCACCTGAGACAGACAA < 41bp 1 0.298301473483381 1 0.215106427669525 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47382146 chr3:47382161 synonymous SNV . 0 36 hm5C_associated_SNPs_4382 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:47382151-47382184
64251 chr3 47447473 47447473 1 + C A rs138320436 47447468 + 47447448 47447488 41 CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC CCTTCGCCTACCTACGGGAGCACTTACCTCAAGCCTACAGC < 41bp 1 0.0794110021967535 1 0.0278002619743347 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447468 chr3:47447473 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_4383 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:47447467-47447497
64251 chr3 47455605 47455605 1 - T C rs535264774 47455586 - 47455566 47455606 41 CATGTCCTTGCCTCCAGGACCTGGGCTGTGGTGCAAGCTTG CGTGTCCTTGCCTCCAGGACCTGGGCTGTGGTGCAAGCTTG < 41bp 1 0.515109729431212 1 0.283552527427673 experiment 0.969780541137576 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SCAP ENSG00000114650 intronic Human protein_coding chr3:47455586 chr3:47455605 . . 0 2 hm5C_associated_SNPs_4384 0 0 4 EFTUD2 POSTAR2 ENCODE chr3:47455572-47455637
64251 chr3 47882517 47882517 1 + A G rs115678925 47882499 + 47882479 47882519 41 TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTATT TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTGTT < 41bp 1 0.289250901975271 1 0.124742209911346 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47882499 chr3:47882517 nonsynonymous SNV 0.986 1 39 hm5C_associated_SNPs_4385 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:47882491-47882521
64251 chr3 48488360 48488360 1 + C T rs368960700 48488350 + 48488330 48488370 41 GCACCCCCCGAGCAAGCGGGCCCGGGGCTTCTCCGCAGCCG GCACCCCCCGAGCAAGCGGGCCCGGGGCTTTTCCGCAGCCG < 41bp 1 0.628708851222897 1 0.519837021827698 experiment 0.742582297554206 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48488350 chr3:48488360 synonymous SNV . 0 31 hm5C_associated_SNPs_4388 0 0 2 WTAP POSTAR2 GSE46705,GSM1135010 chr3:48488340-48488360
64251 chr3 48488360 48488360 1 + C T rs368960700 48488351 + 48488331 48488371 41 CACCCCCCGAGCAAGCGGGCCCGGGGCTTCTCCGCAGCCGC CACCCCCCGAGCAAGCGGGCCCGGGGCTTTTCCGCAGCCGC < 41bp 1 0.512820957597454 1 0.755409002304077 experiment 0.974358084805091 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48488351 chr3:48488360 synonymous SNV . 0 30 hm5C_associated_SNPs_4389 0 0 2 WTAP POSTAR2 GSE46705,GSM1135010 chr3:48488340-48488360
64251 chr3 49021773 49021773 1 + A C rs143241623 49021771 + 49021751 49021791 41 GCATGGGGGCTGTGTTTGCACAAGTTATTTTCATGTTACCT GCATGGGGGCTGTGTTTGCACACGTTATTTTCATGTTACCT < 41bp 1 0.675124467187025 1 0.137365162372589 experiment 0.649751065625949 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARIH2 ENSG00000177479 UTR3 Human protein_coding chr3:49021771 chr3:49021773 . . 0 23 hm5C_associated_SNPs_4392 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr3:49021721-49021774
64251 chr3 49050646 49050646 1 + T C rs61742101 49050657 + 49050637 49050677 41 TGGGCCCAGTGTCTACCCTGCCCTCTCTGCACGGGAAGCAG TGGGCCCAGCGTCTACCCTGCCCTCTCTGCACGGGAAGCAG < 41bp 1 0.0306724755879248 1 0.0255348682403564 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050657 chr3:49050646 nonsynonymous SNV 0.543 1 10 hm5C_associated_SNPs_4393 0 0 33 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49050600-49050660
64251 chr3 49053338 49053338 1 + C A rs199567076 49053336 + 49053316 49053356 41 AGACTGAGTCACTGGCCCATCTCTTTGCTCTTGTGCCCCAG AGACTGAGTCACTGGCCCATCTATTTGCTCTTGTGCCCCAG < 41bp 1 0.415733805390675 1 0.206013709306717 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR6 ENSG00000178149 CDS Human protein_coding chr3:49053336 chr3:49053338 nonsynonymous SNV 0.240 1 23 hm5C_associated_SNPs_4394 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:49053203-49053362
64251 chr3 49453180 49453180 1 + C T rs141422153 49453181 + 49453161 49453201 41 CACTATCCAGATGGAGGCACCAAACACCCACATACCTGGCC CACTATCCAGATGGAGGCATCAAACACCCACATACCTGGCC < 41bp 1 0.407284787744755 1 0.496783375740051 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TCTA ENSG00000145022 UTR3 Human protein_coding chr3:49453181 chr3:49453180 . . 0 20 hm5C_associated_SNPs_4395 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:49453170-49453220
64251 chr3 49736907 49736907 1 + A C rs145834474 49736916 + 49736896 49736936 41 GGCACCTACCCAGTGGCAGGCTACCGGCCCCTGCAGGACCC GGCACCTACCCCGTGGCAGGCTACCGGCCCCTGCAGGACCC < 41bp 1 0.248876876884627 1 0.288340479135513 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736916 chr3:49736907 synonymous SNV . 0 12 hm5C_associated_SNPs_4398 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:49736855-49736907
64251 chr3 49736907 49736907 1 + A C rs145834474 49736919 + 49736899 49736939 41 ACCTACCCAGTGGCAGGCTACCGGCCCCTGCAGGACCCACC ACCTACCCCGTGGCAGGCTACCGGCCCCTGCAGGACCCACC < 41bp 1 0.183556370557322 1 0.378927916288376 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736919 chr3:49736907 synonymous SNV . 0 9 hm5C_associated_SNPs_4399 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:49736855-49736907
64251 chr3 50131278 50131278 1 + C T rs566441117 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCATGCTGCGTGGCCTTCCCAT < 41bp 1 0.407606994591785 1 0.239703893661499 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131278 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_4400 0 0 9 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50131200-50131280
64251 chr3 50296220 50296220 1 + C A rs183872438 50296233 + 50296213 50296253 41 CCCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAGAAG CCCCAGCAGCTCGGAGGCCCCAAAGGAAAAAGCACAAGAAG < 41bp 1 0.530428581036163 1 0.71609890460968 experiment 0.939142837927673 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAI2 ENSG00000114353 UTR3 Human protein_coding chr3:50296233 chr3:50296220 . . 0 8 hm5C_associated_SNPs_4402 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:50296220-50296240
64251 chr3 50296234 50296234 1 + A C rs188823486 50296233 + 50296213 50296253 41 CCCCAGCCGCTCGGAGGCCCCAAAGGAAAAAGCACAAGAAG CCCCAGCCGCTCGGAGGCCCCCAAGGAAAAAGCACAAGAAG < 41bp 1 0.23685488518242 1 0.402653425931931 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAI2 ENSG00000114353 UTR3 Human protein_coding chr3:50296233 chr3:50296234 . . 0 22 hm5C_associated_SNPs_4403 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:50296220-50296240
64251 chr3 50306760 50306760 1 + G A rs587618842 50306747 + 50306727 50306767 41 GTGGGGCTGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGG GTGGGGCTGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGG < 41bp 1 0.462950525758882 1 0.491196781396866 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306747 chr3:50306760 . 0.952 1 34 hm5C_associated_SNPs_4404 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306748 + 50306728 50306768 41 TGGGGCTGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGC TGGGGCTGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGC < 41bp 1 0.241369860771959 1 0.341951906681061 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306748 chr3:50306760 . 0.952 1 33 hm5C_associated_SNPs_4405 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306749 + 50306729 50306769 41 GGGGCTGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGCT GGGGCTGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGCT < 41bp 1 0.234078876644017 1 0.451379358768463 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306749 chr3:50306760 . 0.952 1 32 hm5C_associated_SNPs_4406 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306750 + 50306730 50306770 41 GGGCTGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGCTC GGGCTGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGCTC < 41bp 1 0.481074905667324 1 0.410700619220734 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306750 chr3:50306760 . 0.952 1 31 hm5C_associated_SNPs_4407 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306753 + 50306733 50306773 41 CTGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGCTCTCC CTGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGCTCTCC < 41bp 1 0.165629912910123 1 0.147392421960831 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306753 chr3:50306760 . 0.952 1 28 hm5C_associated_SNPs_4408 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306754 + 50306734 50306774 41 TGGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGCTCTCCT TGGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGCTCTCCT < 41bp 1 0.300466700403547 1 0.343337565660477 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306754 chr3:50306760 . 0.952 1 27 hm5C_associated_SNPs_4409 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50306760 50306760 1 + G A rs587618842 50306755 + 50306735 50306775 41 GGGGAGTGCCGCCCCCAGCCCCCACGCCTTCGGCTCTCCTT GGGGAGTGCCGCCCCCAGCCCCCACACCTTCGGCTCTCCTT < 41bp 1 0.122465504139856 1 0.189752280712128 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171;ENSG00000012171 ncRNA_exonic;splicing Human other chr3:50306755 chr3:50306760 . 0.952 1 26 hm5C_associated_SNPs_4410 0 0 2 DDX3X POSTAR2 ENCODE chr3:50306753-50306775
64251 chr3 50683610 50683610 1 + G A rs183396526 50683592 + 50683572 50683612 41 CTTTGTGGCTTCCCACCCTTCTACTCCAACACGGGCCAGGC CTTTGTGGCTTCCCACCCTTCTACTCCAACACGGGCCAAGC < 41bp 1 0.363565826343686 1 0.337861299514771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683592 chr3:50683610 synonymous SNV . 0 39 hm5C_associated_SNPs_4411 0 0 1 YBX3 POSTAR2 ENCODE chr3:50683587-50683644
64251 chr3 51433254 51433254 1 + C A rs146912969 51433266 + 51433246 51433286 41 ACAGGTGCCTCGCAAGAGAGCAAGCACGTTCATAACAAAAC ACAGGTGCATCGCAAGAGAGCAAGCACGTTCATAACAAAAC < 41bp 1 0.420740738568122 1 0.326697528362274 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM15B ENSG00000179837 UTR3 Human other chr3:51433266 chr3:51433254 . . 0 9 hm5C_associated_SNPs_4413 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:51433189-51433257
64251 chr3 52011906 52011906 1 + T G rs148342997 52011901 + 52011881 52011921 41 CTCCAGACTGTGGTACAGACCTCCATGAGCCGGTCCCAGGT CTCCAGACTGTGGTACAGACCTCCAGGAGCCGGTCCCAGGT < 41bp 1 0.794544945021252 1 0.983060956001282 experiment 0.410910109957497 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ABHD14A ENSG00000114786;ENSG00000248487 CDS Human other chr3:52011901 chr3:52011906 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_4415 0 0 3 DDX3X POSTAR2 ENCODE chr3:52011889-52011943
64251 chr3 52011912 52011912 1 + G A rs17849626 52011901 + 52011881 52011921 41 CTCCAGACTGTGGTACAGACCTCCATGAGCCGGTCCCAGGT CTCCAGACTGTGGTACAGACCTCCATGAGCCAGTCCCAGGT < 41bp 1 0.785751475862633 1 0.988485038280487 experiment 0.428497048274733 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ABHD14A ENSG00000114786;ENSG00000248487 CDS Human other chr3:52011901 chr3:52011912 nonsynonymous SNV 0.985 2 32 hm5C_associated_SNPs_4416 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr3:52011909-52011957
64251 chr3 52014897 52014897 1 + C G rs61729088 52014890 + 52014870 52014910 41 TATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACTGCG TATGGAGAGCTGGACCACATCCTGGCTGGAGAGTCACTGCG < 41bp 1 0.453746317824881 1 0.428369373083115 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ABHD14A ENSG00000248487 CDS Human protein_coding chr3:52014890 chr3:52014897 nonsynonymous SNV 0.741 0 28 hm5C_associated_SNPs_4417 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52014876-52014900
64251 chr3 52014907 52014907 1 + T G rs34149506 52014890 + 52014870 52014910 41 TATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACTGCG TATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACGGCG < 41bp 1 0.467548150240906 1 0.602752864360809 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ABHD14A ENSG00000248487 CDS Human protein_coding chr3:52014890 chr3:52014907 nonsynonymous SNV 0.826 2 38 hm5C_associated_SNPs_4418 0 0 2 DDX3X POSTAR2 ENCODE chr3:52014867-52014913
64251 chr3 52014910 52014910 1 + G A rs201197998 52014890 + 52014870 52014910 41 TATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACTGCG TATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACTGCA < 41bp 1 0.423969442100243 1 0.501756608486176 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ABHD14A ENSG00000248487 CDS Human protein_coding chr3:52014890 chr3:52014910 nonsynonymous SNV 0.786 0 41 hm5C_associated_SNPs_4419 0 0 2 DDX3X POSTAR2 ENCODE chr3:52014867-52014913
64251 chr3 52233264 52233264 1 + A G rs150932815 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGGGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT < 41bp 1 0.31088807073709 1 0.207776248455048 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233264 nonsynonymous SNV 0.991 2 7 hm5C_associated_SNPs_4420 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52233243-52233288
64251 chr3 52233295 52233295 1 + G A rs35338461 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCAAGT < 41bp 1 0.321924047081166 1 0.316384851932526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233295 nonsynonymous SNV 0.995 2 38 hm5C_associated_SNPs_4421 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:52233245-52233314
64251 chr3 52233384 52233384 1 + C T rs61729068 52233380 + 52233360 52233400 41 AAGATGATGGAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT AAGATGATGGAAGTTGGGGCCAAGTCAGCCCCTCGGGCATT < 41bp 1 0.55861504190876 1 0.420797228813171 experiment 0.88276991618248 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233380 chr3:52233384 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_4422 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:52233372-52233408
64251 chr3 52233387 52233387 1 + G T rs61729067 52233380 + 52233360 52233400 41 AAGATGATGGAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT AAGATGATGGAAGTTGGGGCCAAGCCATCCCCTCGGGCATT < 41bp 1 0.423846225959583 1 0.483277320861816 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233380 chr3:52233387 nonsynonymous SNV 0.996 1 28 hm5C_associated_SNPs_4423 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:52233372-52233408
64251 chr3 52237928 52237928 1 + T C rs199507022 52237938 + 52237918 52237958 41 TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAAGAAC TGAAAACCGACGGAGGGGATCCCAGTGGACTGCTGAAGAAC < 41bp 1 0.372471349642954 1 0.153579235076904 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52237938 chr3:52237928 synonymous SNV . 0 11 hm5C_associated_SNPs_4424 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52237899-52237929
64251 chr3 52325039 52325039 1 + G A rs35976326 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGGAGGACAACCTCCCAGACCGCGATGCGCTGCGGG < 41bp 1 0.510271893815527 1 0.493677467107773 experiment 0.979456212368946 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325039 synonymous SNV . 0 22 hm5C_associated_SNPs_4425 0 0 6 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr3 52325051 52325051 1 + G A rs9831689 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGGAGGACAACCTCCCGGACCGCGATGCACTGCGGG < 41bp 1 0.526799119337723 1 0.752276539802551 experiment 0.946401761324553 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325051 synonymous SNV . 0 34 hm5C_associated_SNPs_4426 0 0 6 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr3 52325055 52325055 1 + C T rs199906865 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGTGGG < 41bp 1 0.528955027934004 1 0.736283481121063 experiment 0.942089944131993 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325055 nonsynonymous SNV 0.004 3 38 hm5C_associated_SNPs_4427 0 0 6 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr3 57898184 57898184 1 + T C rs554868355 57898199 + 57898179 57898219 41 AGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT AGAGACGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT < 41bp 1 0.531532343324475 1 0.69355046749115 experiment 0.93693531335105 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898199 chr3:57898184 synonymous SNV . 0 6 hm5C_associated_SNPs_4429 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:57898171-57898185
64251 chr3 58067436 58067436 1 + C T rs111433950 58067455 + 58067435 58067475 41 CCAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAAC CTAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAAC < 41bp 1 0.0156858980953096 1 0.0678444504737854 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067455 chr3:58067436 synonymous SNV . 0 2 hm5C_associated_SNPs_4432 1 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr3 58067436 58067436 1 + C T rs111433950 58067456 + 58067436 58067476 41 CAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAACC TAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAACC < 41bp 1 0.0518128660244948 1 0.272881329059601 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067456 chr3:58067436 synonymous SNV . 0 1 hm5C_associated_SNPs_4433 1 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr3 58092578 58092578 1 + C T rs62621999 58092593 + 58092573 58092613 41 AGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC AGCCATGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC < 41bp 1 0.389674697027499 1 0.358109205961227 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092593 chr3:58092578 nonsynonymous SNV 0.393 1 6 hm5C_associated_SNPs_4434 1 0 4 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58092578 58092578 1 + C T rs62621999 58092598 + 58092578 58092618 41 CGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC TGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC < 41bp 1 0.513362028857744 1 0.258530467748642 experiment 0.973275942284512 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092598 chr3:58092578 nonsynonymous SNV 0.393 1 1 hm5C_associated_SNPs_4435 1 0 4 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58092589 58092589 1 + A C rs146859540 58092593 + 58092573 58092613 41 AGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC AGCCACGGGAGGCTACCACCCTGATCTGGTGAATCAGCTGC < 41bp 1 0.357738138134036 1 0.248545110225677 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092593 chr3:58092589 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_4436 0 0 3 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58092589 58092589 1 + A C rs146859540 58092598 + 58092578 58092618 41 CGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC CGGGAGGCTACCACCCTGATCTGGTGAATCAGCTGCTGTGC < 41bp 1 0.56449683926861 1 0.259912252426147 experiment 0.87100632146278 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092598 chr3:58092589 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_4437 0 0 3 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58097556 58097556 1 + T G rs376893941 58097553 + 58097533 58097573 41 CCTTTCAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAA CCTTTCAGAGTCAAAGTTGACCCGTCCCACGATGCCAGCAA < 41bp 1 0.239325436221197 1 0.138468414545059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097553 chr3:58097556 synonymous SNV . 0 24 hm5C_associated_SNPs_4438 1 0 3 BUD13 POSTAR2 ENCODE chr3:58097496-58097557
64251 chr3 58097556 58097556 1 + T G rs376893941 58097554 + 58097534 58097574 41 CTTTCAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAA CTTTCAGAGTCAAAGTTGACCCGTCCCACGATGCCAGCAAA < 41bp 1 0.0302380239659586 1 0.446276485919952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097554 chr3:58097556 synonymous SNV . 0 23 hm5C_associated_SNPs_4439 1 0 3 BUD13 POSTAR2 ENCODE chr3:58097496-58097557
64251 chr3 58097556 58097556 1 + T G rs376893941 58097558 + 58097538 58097578 41 CAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGA CAGAGTCAAAGTTGACCCGTCCCACGATGCCAGCAAAGTGA < 41bp 1 0.0288242196215927 1 0.173958629369736 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097558 chr3:58097556 synonymous SNV . 0 19 hm5C_associated_SNPs_4440 1 0 3 BUD13 POSTAR2 ENCODE chr3:58097496-58097557
64251 chr3 58097556 58097556 1 + T G rs376893941 58097560 + 58097540 58097580 41 GAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGAAG GAGTCAAAGTTGACCCGTCCCACGATGCCAGCAAAGTGAAG < 41bp 1 0.652629725942173 1 0.156654626131058 experiment 0.694740548115655 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097560 chr3:58097556 synonymous SNV . 0 17 hm5C_associated_SNPs_4441 1 0 3 BUD13 POSTAR2 ENCODE chr3:58097496-58097557
64251 chr3 58112440 58112440 1 + A G rs2362903 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTCGCGCCGGGGGATTACGATGTTA < 41bp 1 0.505898276024337 1 0.194136768579483 experiment 0.988203447951325 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112440 synonymous SNV . 0 22 hm5C_associated_SNPs_4442 2 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112440 58112440 1 + A G rs2362903 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTCGCGCCGGGGGATTACGATGTTAAT < 41bp 1 0.169489164102487 1 0.375142216682434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112440 synonymous SNV . 0 20 hm5C_associated_SNPs_4443 2 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112440 58112440 1 + A G rs2362903 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTCGCGCCGGGGGATTACGATGTTAATA < 41bp 1 0.387542809185219 1 0.8094322681427 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112440 synonymous SNV . 0 19 hm5C_associated_SNPs_4444 2 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58292010 58292010 1 + G A rs114294662 58292007 + 58291987 58292027 41 TCACGCTTCGTGGGGCGGGACGAGGAGAAGCCAAACGTAAA TCACGCTTCGTGGGGCGGGACGAAGAGAAGCCAAACGTAAA < 41bp 1 0.644194466751988 1 0.572266221046448 experiment 0.711611066496024 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTD2;RPP14 ENSG00000163684 UTR5 Human protein_coding chr3:58292007 chr3:58292010 . . 0 24 hm5C_associated_SNPs_4445 0 0 1 NCBP2 POSTAR2 ENCODE chr3:58291994-58292085
64251 chr3 63531170 63531170 1 + G A rs113239055 63531173 + 63531153 63531193 41 AGAAGCTAAACAGGGTCGGGCCTGGTTAGTACTTGGATGGG AGAAGCTAAACAGGGTCAGGCCTGGTTAGTACTTGGATGGG < 41bp 1 0.0651567766005854 1 0.15045353770256 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SYNPR-AS1 ENSG00000252301 ncRNA_exonic Human rRNA chr3:63531173 chr3:63531170 . . 0 18 hm5C_associated_SNPs_4447 0 0 13 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:63531140-63531180
64251 chr3 63531170 63531170 1 + G A rs113239055 63531174 + 63531154 63531194 41 GAAGCTAAACAGGGTCGGGCCTGGTTAGTACTTGGATGGGG GAAGCTAAACAGGGTCAGGCCTGGTTAGTACTTGGATGGGG < 41bp 1 0.184803015920161 1 0.206924557685852 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SYNPR-AS1 ENSG00000252301 ncRNA_exonic Human rRNA chr3:63531174 chr3:63531170 . . 0 17 hm5C_associated_SNPs_4448 0 0 13 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:63531140-63531180
64251 chr3 63898266 63898266 1 + G A rs547615608 63898267 + 63898247 63898287 41 TTTTTGTTACATTGTAGGAGCGGAAAGAATGTCGGAGCGGG TTTTTGTTACATTGTAGGAACGGAAAGAATGTCGGAGCGGG < 41bp 1 0.699153019934991 1 0.221601933240891 experiment 0.601693960130019 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATXN7 ENSG00000163635 UTR5 Human protein_coding chr3:63898267 chr3:63898266 . . 0 20 hm5C_associated_SNPs_4449 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:63898258-63898309
64251 chr3 66419942 66419942 1 + A G rs1129179 66419929 + 66419909 66419949 41 TGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAA TGCCGCTGCAGTCACCACCCCTCTAGACGTGGCGAAGACAA < 41bp 1 0.43377064321731 1 0.891325235366821 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control SLC25A26 ENSG00000144741 CDS Human protein_coding chr3:66419929 chr3:66419942 synonymous SNV . 0 34 hm5C_associated_SNPs_4450 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:66419913-66419948
64251 chr3 66428570 66428570 1 + G A rs182030212 66428555 + 66428535 66428575 41 TGTATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTC TGTATCTGATCTTTCATTTCCTGCCACCTGATGGTAGATTC < 41bp 1 0.0850554864345031 1 0.208293944597244 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC25A26 ENSG00000144741 UTR3 Human protein_coding chr3:66428555 chr3:66428570 . . 0 36 hm5C_associated_SNPs_4451 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:66428549-66428572
64251 chr3 66428570 66428570 1 + G A rs182030212 66428558 + 66428538 66428578 41 ATCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGC ATCTGATCTTTCATTTCCTGCCACCTGATGGTAGATTCAGC < 41bp 1 0.0056042900378647 1 0.0496841371059418 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC25A26 ENSG00000144741 UTR3 Human protein_coding chr3:66428558 chr3:66428570 . . 0 33 hm5C_associated_SNPs_4452 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:66428549-66428572
64251 chr3 66428570 66428570 1 + G A rs182030212 66428559 + 66428539 66428579 41 TCTGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCA TCTGATCTTTCATTTCCTGCCACCTGATGGTAGATTCAGCA < 41bp 1 0.0355706287908817 1 0.35126730799675 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC25A26 ENSG00000144741 UTR3 Human protein_coding chr3:66428559 chr3:66428570 . . 0 32 hm5C_associated_SNPs_4453 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:66428549-66428572
64251 chr3 66428570 66428570 1 + G A rs182030212 66428561 + 66428541 66428581 41 TGATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGA TGATCTTTCATTTCCTGCCACCTGATGGTAGATTCAGCAGA < 41bp 1 0.0309069129907983 1 0.103060841560364 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC25A26 ENSG00000144741 UTR3 Human protein_coding chr3:66428561 chr3:66428570 . . 0 30 hm5C_associated_SNPs_4454 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:66428549-66428572
64251 chr3 66428570 66428570 1 + G A rs182030212 66428562 + 66428542 66428582 41 GATCTTTCATTTCCTGCCACCTGATGGTGGATTCAGCAGAA GATCTTTCATTTCCTGCCACCTGATGGTAGATTCAGCAGAA < 41bp 1 0.0641372785482233 1 0.479296296834946 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC25A26 ENSG00000144741 UTR3 Human protein_coding chr3:66428562 chr3:66428570 . . 0 29 hm5C_associated_SNPs_4455 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:66428549-66428572
64251 chr3 66430870 66430870 1 - G A rs61754218 66430873 - 66430853 66430893 41 GCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGC GCAAGGTTGTATCACCCGGACTCTACAGAGCTACAGCCTGC < 41bp 1 0.329221479813591 1 0.204283863306046 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430873 chr3:66430870 synonymous SNV . 0 24 hm5C_associated_SNPs_4460 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:66430832-66430884
64251 chr3 66430877 66430877 1 - G A rs332374 66430873 - 66430853 66430893 41 GCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGC GCAAGGTTGTATCACCTGGACTCCACAGAGCTACAGCCTGC < 41bp 1 0.613048709501618 1 0.465258061885834 experiment 0.773902580996764 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430873 chr3:66430877 nonsynonymous SNV 0.001 0 17 hm5C_associated_SNPs_4461 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:66430832-66430884
64251 chr3 73113180 73113180 1 + C T rs2306983 73113185 + 73113165 73113205 41 ATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTT ATGGGCCTGGGACACTCAGGCCACTTAATCGACCAAAGGTT < 41bp 1 0.161960187371509 1 0.153119742870331 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113185 chr3:73113180 nonsynonymous SNV 0.998 4 16 hm5C_associated_SNPs_4462 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 73113180 73113180 1 + C T rs2306983 73113186 + 73113166 73113206 41 TGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTT TGGGCCTGGGACACTCAGGCCACTTAATCGACCAAAGGTTT < 41bp 1 0.13261055085497 1 0.0331465601921082 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113186 chr3:73113180 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_4463 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 73113187 73113187 1 + A G rs9823669 73113185 + 73113165 73113205 41 ATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTT ATGGGCCTGGGACACCCAGGCCGCTTAATCGACCAAAGGTT < 41bp 1 0.228353721323626 1 0.341462641954422 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113185 chr3:73113187 synonymous SNV . 0 23 hm5C_associated_SNPs_4464 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 73113187 73113187 1 + A G rs9823669 73113186 + 73113166 73113206 41 TGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTT TGGGCCTGGGACACCCAGGCCGCTTAATCGACCAAAGGTTT < 41bp 1 0.159145211123009 1 0.0820370316505432 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113186 chr3:73113187 synonymous SNV . 0 22 hm5C_associated_SNPs_4465 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 99897169 99897169 1 + A C rs575019956 99897188 + 99897168 99897208 41 AACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA ACCTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA < 41bp 1 0.24983763705001 1 0.133858054876328 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897188 chr3:99897169 nonsynonymous SNV 0.999 1 2 hm5C_associated_SNPs_4466 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:99897148-99897198
64251 chr3 101280710 101280710 1 + C T rs4683930 101280727 + 101280707 101280747 41 GCTCTGGTCGGCTGTGTAGACTGTTGGGTAGGCTGCGTGCT GCTTTGGTCGGCTGTGTAGACTGTTGGGTAGGCTGCGTGCT < 41bp 1 0.722989761436425 1 0.211056441068649 experiment 0.55402047712715 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRMT10C ENSG00000174173 UTR5 Human protein_coding chr3:101280727 chr3:101280710 . . 0 4 hm5C_associated_SNPs_4469 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:101280709-101280710
64251 chr3 101312178 101312178 1 + G T rs137862577 101312197 + 101312177 101312217 41 AGATTTTTTTTTTATGTAAACTGTTGAATATTTGAAATAGT ATATTTTTTTTTTATGTAAACTGTTGAATATTTGAAATAGT < 41bp 1 0.17672702263271 1 0.123548179864883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNP ENSG00000081154 UTR3 Human protein_coding chr3:101312197 chr3:101312178 . . 0 2 hm5C_associated_SNPs_4470 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101312154-101312178
64251 chr3 101498082 101498082 1 + G A rs151220139 101498099 + 101498079 101498119 41 GCGGGGGGCTAGCGGCCTGGCGCTGCGGCGACCGACCGGGG GCGAGGGGCTAGCGGCCTGGCGCTGCGGCGACCGACCGGGG < 41bp 1 0.728952611546147 1 0.579843699932098 experiment 0.542094776907706 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NXPE3 ENSG00000144815 UTR5 Human protein_coding chr3:101498099 chr3:101498082 . . 0 4 hm5C_associated_SNPs_4471 0 0 2 DDX3X POSTAR2 ENCODE chr3:101498072-101498159
64251 chr3 101498114 101498114 1 + C A rs555572749 101498099 + 101498079 101498119 41 GCGGGGGGCTAGCGGCCTGGCGCTGCGGCGACCGACCGGGG GCGGGGGGCTAGCGGCCTGGCGCTGCGGCGACCGAACGGGG < 41bp 1 0.697236002562279 1 0.515259563922882 experiment 0.605527994875441 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NXPE3 ENSG00000144815 UTR5 Human protein_coding chr3:101498099 chr3:101498114 . . 0 36 hm5C_associated_SNPs_4472 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:101498100-101498120
64251 chr3 112713992 112713992 1 + A C rs148441248 112714008 + 112713988 112714028 41 ACAAAGAAAATGAATTTTTTCAAAGTTGGAAAACATTTTAC ACAACGAAAATGAATTTTTTCAAAGTTGGAAAACATTTTAC < 41bp 1 0.567845973798905 1 0.800873160362244 experiment 0.86430805240219 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714008 chr3:112713992 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_4475 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:112713954-112713993
64251 chr3 113677948 113677948 1 + G A rs151109209 113677933 + 113677913 113677953 41 CCCTGGCTACCTCACAGAGCCGTCATGAGGGTCACGTGAGG CCCTGGCTACCTCACAGAGCCGTCATGAGGGTCACATGAGG < 41bp 1 0.408791328351767 1 0.281673222780228 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZDHHC23 ENSG00000184307 intronic Human protein_coding chr3:113677933 chr3:113677948 . . 0 36 hm5C_associated_SNPs_4476 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:113677948-113677975
64251 chr3 113775921 113775921 1 + A G rs117024146 113775934 + 113775914 113775954 41 TGAGATAAAAGGGCCCCTTTCGACTAGCCTCTGCTGAAAGG TGAGATAGAAGGGCCCCTTTCGACTAGCCTCTGCTGAAAGG < 41bp 1 0.44187191059763 1 0.67712938785553 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient QTRT2 ENSG00000151576 UTR5 Human protein_coding chr3:113775934 chr3:113775921 . . 0 8 hm5C_associated_SNPs_4477 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:113775887-113775937
64251 chr3 113784173 113784173 1 + A T rs569754989 113784180 + 113784160 113784200 41 ACCTGGGCAAAACAGGGGACCACACCATGGATATTCCAGGC ACCTGGGCAAAACTGGGGACCACACCATGGATATTCCAGGC < 41bp 1 0.260945254862976 1 0.304240733385086 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113784180 chr3:113784173 synonymous SNV . 0 14 hm5C_associated_SNPs_4478 0 0 1 TBRG4 POSTAR2 ENCODE chr3:113784164-113784205
64251 chr3 122128757 122128757 1 + T C rs16833120 122128764 + 122128744 122128784 41 AAAGGATGTGGTATGAGGATCCATTTCATAAAGTATGATTT AAAGGATGTGGTACGAGGATCCATTTCATAAAGTATGATTT < 41bp 1 0.0353645961447331 1 0.0547116100788116 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM162A ENSG00000114023 UTR3 Human protein_coding chr3:122128764 chr3:122128757 . . 0 14 hm5C_associated_SNPs_4480 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:122128671-122128831
64251 chr3 122513972 122513972 1 + T C rs117322422 122513968 + 122513948 122513988 41 CCGCCTCCTGCTGCTCAGGACTATTCTGCGCTGGGCTAGTC CCGCCTCCTGCTGCTCAGGACTATCCTGCGCTGGGCTAGTC < 41bp 1 0.192991352076015 1 0.036399245262146 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DIRC2 ENSG00000138463 UTR5 Human protein_coding chr3:122513968 chr3:122513972 . . 0 25 hm5C_associated_SNPs_4484 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr3:122513971-122513972
64251 chr3 122513974 122513974 1 + T C rs561800780 122513968 + 122513948 122513988 41 CCGCCTCCTGCTGCTCAGGACTATTCTGCGCTGGGCTAGTC CCGCCTCCTGCTGCTCAGGACTATTCCGCGCTGGGCTAGTC < 41bp 1 0.205082604828059 1 0.0411484241485596 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DIRC2 ENSG00000138463 UTR5 Human protein_coding chr3:122513968 chr3:122513974 . . 0 27 hm5C_associated_SNPs_4485 0 0 1 DDX3X POSTAR2 ENCODE chr3:122513973-122514046
64251 chr3 126707688 126707688 1 + C T rs567137511 126707684 + 126707664 126707704 41 GAACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGG GAACCTGACACTGCTGCGGGCCCATGTCACGGGCCCTGTGG < 41bp 1 0.0541714673125952 1 0.0826447904109955 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707684 chr3:126707688 synonymous SNV . 0 25 hm5C_associated_SNPs_4490 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707688 126707688 1 + C T rs567137511 126707685 + 126707665 126707705 41 AACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGGA AACCTGACACTGCTGCGGGCCCATGTCACGGGCCCTGTGGA < 41bp 1 0.0234972970195064 1 0.0913787186145782 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707685 chr3:126707688 synonymous SNV . 0 24 hm5C_associated_SNPs_4491 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707688 126707688 1 + C T rs567137511 126707686 + 126707666 126707706 41 ACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGGAG ACCTGACACTGCTGCGGGCCCATGTCACGGGCCCTGTGGAG < 41bp 1 0.220632500773886 1 0.196746557950974 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707686 chr3:126707688 synonymous SNV . 0 23 hm5C_associated_SNPs_4492 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707688 126707688 1 + C T rs567137511 126707697 + 126707677 126707717 41 CTGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAA CTGCGGGCCCATGTCACGGGCCCTGTGGAGGACAACGAGAA < 41bp 1 0.0387343409504894 1 0.0488878190517426 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707697 chr3:126707688 synonymous SNV . 0 12 hm5C_associated_SNPs_4493 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707688 126707688 1 + C T rs567137511 126707698 + 126707678 126707718 41 TGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAG TGCGGGCCCATGTCACGGGCCCTGTGGAGGACAACGAGAAG < 41bp 1 0.0279319053340528 1 0.0704778432846069 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707698 chr3:126707688 synonymous SNV . 0 11 hm5C_associated_SNPs_4494 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707688 126707688 1 + C T rs567137511 126707699 + 126707679 126707719 41 GCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAGT GCGGGCCCATGTCACGGGCCCTGTGGAGGACAACGAGAAGT < 41bp 1 0.16244741571114 1 0.091795414686203 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707699 chr3:126707688 synonymous SNV . 0 10 hm5C_associated_SNPs_4495 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126725013 126725013 1 + C T rs61744428 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTCGTCTTCTACAACTGCAGCGTTCACCAGTC < 41bp 1 0.274159827682311 1 0.282576471567154 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126725013 synonymous SNV . 0 33 hm5C_associated_SNPs_4496 0 0 2 DDX24 POSTAR2 ENCODE chr3:126724971-126725027
64251 chr3 126741041 126741041 1 + C G rs150052583 126741032 + 126741012 126741052 41 CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCGCGGGAA CTGGAGGCACAGCGCAGCTTCTCCATGCGGGACCGCGGGAA < 41bp 1 0.658535477045821 1 0.96417772769928 experiment 0.682929045908358 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126741032 chr3:126741041 synonymous SNV . 0 30 hm5C_associated_SNPs_4497 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:126741015-126741050
64251 chr3 126755879 126755879 1 + G A rs374309007 126755898 + 126755878 126755918 41 CGGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCCC CAGCTCGGCCTTGCTGAGAGCCTCCGCCCTGGCTTTCTCCC < 41bp 1 0.0587425199618635 1 0.0416223108768463 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 UTR3 Human protein_coding chr3:126755898 chr3:126755879 . . 0 2 hm5C_associated_SNPs_4498 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:126755838-126755884
64251 chr3 127323806 127323806 1 + C T rs2307312 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GAGCGGGCCACGGAGGATGGCGAGGAGGACGAGGAGATGAT < 41bp 1 0.752009589384026 1 0.747688829898834 experiment 0.495980821231948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323806 synonymous SNV . 0 18 hm5C_associated_SNPs_4499 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:127323780-127323840
64251 chr3 127340583 127340583 1 + C A rs6794323 127340602 + 127340582 127340622 41 ACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT AACTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT < 41bp 1 0.570421235901482 1 0.874672174453735 experiment 0.859157528197037 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127340602 chr3:127340583 nonsynonymous SNV 0.993 4 2 hm5C_associated_SNPs_4500 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127340515-127340620
64251 chr3 127340590 127340590 1 + A C rs142055220 127340602 + 127340582 127340622 41 ACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT ACCTGAAACGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT < 41bp 1 0.635219876296334 1 0.854683399200439 experiment 0.729560247407331 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127340602 chr3:127340590 synonymous SNV . 0 9 hm5C_associated_SNPs_4501 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127340515-127340620
64251 chr3 127391419 127391419 1 + C T rs10049266 127391423 + 127391403 127391443 41 CAGCCCCGCGCCTACCCGGGCCGCCCCCGCGGCCTGGCCCT CAGCCCCGCGCCTACCTGGGCCGCCCCCGCGGCCTGGCCCT < 41bp 1 0.264854331381164 1 0.0450578033924103 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PODXL2 ENSG00000114631 UTR3 Human protein_coding chr3:127391423 chr3:127391419 . . 0 17 hm5C_associated_SNPs_4502 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:127391400-127391476
64251 chr3 127771264 127771264 1 + C G rs547385728 127771247 + 127771227 127771267 41 GGCCCCGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGCCGC GGCCCCGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGGCGC < 41bp 1 0.767774795324207 1 0.410869270563126 experiment 0.464450409351587 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771247 chr3:127771264 . . 0 38 hm5C_associated_SNPs_4507 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr3 127771264 127771264 1 + C G rs547385728 127771248 + 127771228 127771268 41 GCCCCGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGCCGCC GCCCCGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGGCGCC < 41bp 1 0.788145937396329 1 0.57755321264267 experiment 0.423708125207342 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771248 chr3:127771264 . . 0 37 hm5C_associated_SNPs_4508 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr3 127771264 127771264 1 + C G rs547385728 127771252 + 127771232 127771272 41 CGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGCCGCCGGGC CGGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGGCGCCGGGC < 41bp 1 0.625089442934427 1 0.154852271080017 experiment 0.749821114131147 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771252 chr3:127771264 . . 0 33 hm5C_associated_SNPs_4509 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr3 127771264 127771264 1 + C G rs547385728 127771253 + 127771233 127771273 41 GGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGCCGCCGGGCT GGCCCCGCCCCGCGCCGCGCCGCGCCGCTTGGCGCCGGGCT < 41bp 1 0.696801858611282 1 0.686471462249756 experiment 0.606396282777437 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771253 chr3:127771264 . . 0 32 hm5C_associated_SNPs_4510 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr3 127771264 127771264 1 + C G rs547385728 127771257 + 127771237 127771277 41 CCGCCCCGCGCCGCGCCGCGCCGCTTGCCGCCGGGCTAGCA CCGCCCCGCGCCGCGCCGCGCCGCTTGGCGCCGGGCTAGCA < 41bp 1 0.571111048392189 1 0.155615389347076 experiment 0.857777903215622 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771257 chr3:127771264 . . 0 28 hm5C_associated_SNPs_4511 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr3 127790143 127790143 1 + A G rs78722933 127790162 + 127790142 127790182 41 CAGGGGAGAGGCTCTTGAGACCTGATGCCCTCCTACCCACA CGGGGGAGAGGCTCTTGAGACCTGATGCCCTCCTACCCACA < 41bp 1 0.633532130463713 1 0.282819092273712 experiment 0.732935739072574 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC61A1 ENSG00000058262 UTR3 Human protein_coding chr3:127790162 chr3:127790143 . . 0 2 hm5C_associated_SNPs_4512 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:127790096-127790212
64251 chr3 128445182 128445182 1 + G T rs112000804 128445198 + 128445178 128445218 41 CGGAGCCCCCAGCGCAGCGGCCGCGGTAAGCAGCGGGCCCA CGGATCCCCCAGCGCAGCGGCCGCGGTAAGCAGCGGGCCCA < 41bp 1 0.773356971246145 1 0.148245215415955 experiment 0.45328605750771 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB7A ENSG00000075785 UTR5 Human protein_coding chr3:128445198 chr3:128445182 . . 0 5 hm5C_associated_SNPs_4513 2 0 6 DDX3X POSTAR2 ENCODE chr3:128445107-128445198
64251 chr3 128998028 128998028 1 + C T rs563170047 128998008 + 128997988 128998028 41 CCCGAGCACCGGCCCCCGCTCCGGGGAGCAGAGTCCGGAGC CCCGAGCACCGGCCCCCGCTCCGGGGAGCAGAGTCCGGAGT < 41bp 1 0.756297897476654 1 0.907465696334839 experiment 0.487404205046691 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HMCES ENSG00000183624 UTR5 Human protein_coding chr3:128998008 chr3:128998028 . . 0 41 hm5C_associated_SNPs_4515 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:128998018-128998046
64251 chr3 133306286 133306286 1 + C T rs77613106 133306304 + 133306284 133306324 41 CTCGAGTTTCTTTACCTGATCTAATCAGATCCACTCCCACA CTTGAGTTTCTTTACCTGATCTAATCAGATCCACTCCCACA < 41bp 1 0.316107705272473 1 0.0225623250007629 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDV3 ENSG00000091527 UTR3 Human protein_coding chr3:133306304 chr3:133306286 . . 0 3 hm5C_associated_SNPs_4517 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:133306242-133306288
64251 chr3 135969225 135969225 1 + C T rs373685372 135969213 + 135969193 135969233 41 TAGGGGACGCGCCGGCACAGCAAAAATGGCGGCGGCATTAC TAGGGGACGCGCCGGCACAGCAAAAATGGCGGTGGCATTAC < 41bp 1 0.713822096839304 1 0.252745687961578 experiment 0.572355806321392 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:135969213 chr3:135969225 nonsynonymous SNV 0.821 1 33 hm5C_associated_SNPs_4518 0 0 10 EIF3A POSTAR2 GSE65004,GSM1585665 chr3:135969212-135969234
64251 chr3 136002730 136002730 1 + C T rs371155999 136002747 + 136002727 136002767 41 GGCCCATGTGCTGGTGGGGCCGTCTACTCCCCAGCCCTAAC GGCTCATGTGCTGGTGGGGCCGTCTACTCCCCAGCCCTAAC < 41bp 1 0.196602681772746 1 0.391293734312057 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136002747 chr3:136002730 nonsynonymous SNV 0.990 5 4 hm5C_associated_SNPs_4519 1 0 7 BUD13 POSTAR2 ENCODE chr3:136002670-136002789
64251 chr3 136002738 136002738 1 + T C rs141340198 136002747 + 136002727 136002767 41 GGCCCATGTGCTGGTGGGGCCGTCTACTCCCCAGCCCTAAC GGCCCATGTGCCGGTGGGGCCGTCTACTCCCCAGCCCTAAC < 41bp 1 0.228229531979443 1 0.383101344108582 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136002747 chr3:136002738 synonymous SNV . 0 12 hm5C_associated_SNPs_4520 1 0 6 BUD13 POSTAR2 ENCODE chr3:136002670-136002789
64251 chr3 138123221 138123221 1 + A G rs565603964 138123236 + 138123216 138123256 41 ACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT ACCCCGTGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT < 41bp 1 0.673978121793348 1 0.408973455429077 experiment 0.652043756413305 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRAS ENSG00000158186 UTR3 Human protein_coding chr3:138123236 chr3:138123221 . . 0 6 hm5C_associated_SNPs_4523 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:138123212-138123238
64251 chr3 138123255 138123255 1 + C G rs115538490 138123236 + 138123216 138123256 41 ACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT ACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAGT < 41bp 1 0.663256530464157 1 0.380304276943207 experiment 0.673486939071685 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRAS ENSG00000158186 UTR3 Human protein_coding chr3:138123236 chr3:138123255 . . 0 40 hm5C_associated_SNPs_4524 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:138123219-138123261
64251 chr3 138329862 138329862 1 + G A rs811322 138329875 + 138329855 138329895 41 TATCTCCGGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA TATCTCCAGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA < 41bp 1 0.7366523333193 1 0.84821605682373 experiment 0.5266953333614 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138329875 chr3:138329862 synonymous SNV . 0 8 hm5C_associated_SNPs_4525 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:138329854-138329877
64251 chr3 141644465 141644465 1 + A G rs147988761 141644475 + 141644455 141644495 41 AGATTGATGGATCAGCCAACCTAAAAAGTCAGGATGATCGT AGATTGATGGGTCAGCCAACCTAAAAAGTCAGGATGATCGT < 41bp 1 0.726741135994227 1 0.386220395565033 experiment 0.546517728011546 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141644475 chr3:141644465 synonymous SNV . 0 11 hm5C_associated_SNPs_4528 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:141644465-141644490
64251 chr3 142741813 142741813 1 + C T rs190778086 142741800 + 142741780 142741820 41 TATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGC TATGATGGAACATACGCTTCCCCCACCTCCATCTGGACTGC < 41bp 1 0.565680234048424 1 0.0612162947654724 experiment 0.868639531903151 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142741800 chr3:142741813 synonymous SNV . 0 34 hm5C_associated_SNPs_4530 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:142741780-142741848
64251 chr3 150347490 150347490 1 + C T rs116450267 150347492 + 150347472 150347512 41 ATTCAGCTGTGTTGTTGACGCTCATCTCTTTTGTCTTACGC ATTCAGCTGTGTTGTTGATGCTCATCTCTTTTGTCTTACGC < 41bp 1 0.430404582754189 1 0.17667943239212 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control SELENOT ENSG00000198843 UTR3 Human protein_coding chr3:150347492 chr3:150347490 . . 0 19 hm5C_associated_SNPs_4554 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150347450-150347574
64251 chr3 150347494 150347494 1 + C T rs181294307 150347492 + 150347472 150347512 41 ATTCAGCTGTGTTGTTGACGCTCATCTCTTTTGTCTTACGC ATTCAGCTGTGTTGTTGACGCTTATCTCTTTTGTCTTACGC < 41bp 1 0.238443322158357 1 0.17833799123764 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control SELENOT ENSG00000198843 UTR3 Human protein_coding chr3:150347492 chr3:150347494 . . 0 23 hm5C_associated_SNPs_4555 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150347450-150347574
64251 chr3 150905912 150905912 1 + G A rs147950629 150905929 + 150905909 150905949 41 CGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCG CGCACCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCG < 41bp 1 0.302436565710898 1 0.496202349662781 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MED12L ENSG00000199994 ncRNA_exonic Human rRNA chr3:150905929 chr3:150905912 . . 0 4 hm5C_associated_SNPs_4556 0 0 1 AARS POSTAR2 ENCODE chr3:150905895-150905968
64251 chr3 150905912 150905912 1 + G A rs147950629 150905931 + 150905911 150905951 41 CGCCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGG CACCCGATCTCGTCTGATCTCGGAAGCTAAGCAGGGTCGGG < 41bp 1 0.379209427245412 1 0.720813393592834 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MED12L ENSG00000199994 ncRNA_exonic Human rRNA chr3:150905931 chr3:150905912 . . 0 2 hm5C_associated_SNPs_4557 0 0 1 AARS POSTAR2 ENCODE chr3:150905895-150905968
64251 chr3 150905972 150905972 1 + A G rs117883161 150905952 + 150905932 150905972 41 GGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGA GGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGG < 41bp 1 0.0441794174079731 1 0.186518609523773 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MED12L ENSG00000199994 ncRNA_exonic Human rRNA chr3:150905952 chr3:150905972 . . 0 41 hm5C_associated_SNPs_4558 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr3:150905922-150905972
64251 chr3 150905972 150905972 1 + A G rs117883161 150905953 + 150905933 150905973 41 GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGAG GAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGG < 41bp 1 0.163241402030203 1 0.183733105659485 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MED12L ENSG00000199994 ncRNA_exonic Human rRNA chr3:150905953 chr3:150905972 . . 0 40 hm5C_associated_SNPs_4559 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr3:150905922-150905972
64251 chr3 150905972 150905972 1 + A G rs117883161 150905963 + 150905943 150905983 41 AGGGTCGGGCCTGGTTAGTACTTGGATGGAGAAATTATATT AGGGTCGGGCCTGGTTAGTACTTGGATGGGGAAATTATATT < 41bp 1 0.0785924993758532 1 0.0652620494365692 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MED12L ENSG00000199994 ncRNA_exonic Human rRNA chr3:150905963 chr3:150905972 . . 0 30 hm5C_associated_SNPs_4560 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr3:150905922-150905972
64251 chr3 152880223 152880223 1 + C T rs138284875 152880237 + 152880217 152880257 41 GTTCGCCGCCCGGGCTGCTGCTGCCGCCGCGGACTGCTGCG GTTCGCTGCCCGGGCTGCTGCTGCCGCCGCGGACTGCTGCG < 41bp 1 0.746158224691896 1 0.592131793498993 experiment 0.507683550616208 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAP2B ENSG00000181467 UTR5 Human protein_coding chr3:152880237 chr3:152880223 . . 0 7 hm5C_associated_SNPs_4561 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:152880213-152880233
64251 chr3 152880236 152880236 1 + G A rs34370628 152880237 + 152880217 152880257 41 GTTCGCCGCCCGGGCTGCTGCTGCCGCCGCGGACTGCTGCG GTTCGCCGCCCGGGCTGCTACTGCCGCCGCGGACTGCTGCG < 41bp 1 0.76524582709046 1 0.356668651103973 experiment 0.469508345819079 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAP2B ENSG00000181467 UTR5 Human protein_coding chr3:152880237 chr3:152880236 . . 0 20 hm5C_associated_SNPs_4562 0 0 5 DDX3X POSTAR2 ENCODE chr3:152880209-152880262
64251 chr3 152882048 152882048 1 + A G rs527369087 152882059 + 152882039 152882079 41 ATGTGATTCAGGGCCCCCAGCACCCCTGTGTCTGCAGAGTG ATGTGATTCGGGGCCCCCAGCACCCCTGTGTCTGCAGAGTG < 41bp 1 0.32047639582469 1 0.291238099336624 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAP2B ENSG00000181467 UTR3 Human protein_coding chr3:152882059 chr3:152882048 . . 0 10 hm5C_associated_SNPs_4563 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:152882002-152882084
64251 chr3 153974854 153974854 1 + G A rs148433801 153974868 + 153974848 153974888 41 CTGTCCGCTAACTAGTTATCCAAATTGTAAAGCTACAGAAG CTGTCCACTAACTAGTTATCCAAATTGTAAAGCTACAGAAG < 41bp 1 0.39995189335455 1 0.398582309484482 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF26 ENSG00000114790 UTR3 Human protein_coding chr3:153974868 chr3:153974854 . . 0 7 hm5C_associated_SNPs_4564 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:153974809-153974884
64251 chr3 155628652 155628652 1 + G C rs190756684 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTCGAGAGATCAAAGAGACAGTAGGCACGTC < 41bp 1 0.520858670930272 1 0.435214102268219 experiment 0.958282658139456 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628652 nonsynonymous SNV 0.986 0 29 hm5C_associated_SNPs_4565 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155628551-155628653
64251 chr3 155628662 155628662 1 + G A rs35910218 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACATC < 41bp 1 0.508760838462018 1 0.347856760025024 experiment 0.982478323075965 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628662 synonymous SNV . 0 39 hm5C_associated_SNPs_4566 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:155628581-155628664
64251 chr3 156423933 156423933 1 + G A rs187348713 156423929 + 156423909 156423949 41 TGTCAGATACAGCTGGGTTCCCTGGCTGACTCTGTACCTTA TGTCAGATACAGCTGGGTTCCCTGACTGACTCTGTACCTTA < 41bp 1 0.634298427490599 1 0.0717626214027405 experiment 0.731403145018801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIPARP ENSG00000163659 UTR3 Human protein_coding chr3:156423929 chr3:156423933 . . 0 25 hm5C_associated_SNPs_4568 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:156423900-156423940
64251 chr3 158519926 158519926 1 + G C rs577490116 158519940 + 158519920 158519960 41 CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG CTCTCCCTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG < 41bp 1 0.448975205436984 1 0.441890835762024 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519940 chr3:158519926 synonymous SNV . 0 7 hm5C_associated_SNPs_4570 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr3 159944851 159944851 1 + G A rs146766340 159944854 + 159944834 159944874 41 TGCTGTACCTACTCAGGGAACAGCAACCATGTATATCCATT TGCTGTACCTACTCAGGAAACAGCAACCATGTATATCCATT < 41bp 1 0.747585014937703 1 0.390795886516571 experiment 0.504829970124594 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C3orf80 ENSG00000244078 ncRNA_intronic Human other chr3:159944854 chr3:159944851 . . 0 18 hm5C_associated_SNPs_4571 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:159944824-159944862
64251 chr3 160137317 160137317 1 + A C rs61996334 160137312 + 160137292 160137332 41 AAAAAAATCTGGCAGGATTCCAGGAATATATGGAAGATTGG AAAAAAATCTGGCAGGATTCCAGGACTATATGGAAGATTGG < 41bp 1 0.771967059156332 1 0.520023882389069 experiment 0.456065881687337 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160137312 chr3:160137317 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_4573 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160137140-160137330
64251 chr3 169490043 169490043 1 + G A rs569792232 169490023 + 169490003 169490043 41 CCTCTCCAAAGTGGGGTTTCCGTAGTGTAGTGGTTATCACG CCTCTCCAAAGTGGGGTTTCCGTAGTGTAGTGGTTATCACA < 41bp 1 0.246863959863614 1 0.0800560414791107 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490023 chr3:169490043 . . 0 41 hm5C_associated_SNPs_4574 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490040 + 169490020 169490060 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAA TTCCGTAGTGTAGTGGTTATCACATTCGCCTAACACGCGAA < 41bp 1 0.566411823998052 1 0.583998322486877 experiment 0.867176352003896 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490040 chr3:169490043 . . 0 24 hm5C_associated_SNPs_4575 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490042 + 169490022 169490062 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACATTCGCCTAACACGCGAAAG < 41bp 1 0.0926331525381421 1 0.267841637134552 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490042 chr3:169490043 . . 0 22 hm5C_associated_SNPs_4576 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490046 + 169490026 169490066 41 AGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCC AGTGTAGTGGTTATCACATTCGCCTAACACGCGAAAGGTCC < 41bp 1 0.421386035055627 1 0.592857718467712 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490046 chr3:169490043 . . 0 18 hm5C_associated_SNPs_4577 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490048 + 169490028 169490068 41 TGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCC TGTAGTGGTTATCACATTCGCCTAACACGCGAAAGGTCCCC < 41bp 1 0.170870587945024 1 0.343602061271667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490048 chr3:169490043 . . 0 16 hm5C_associated_SNPs_4578 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490049 + 169490029 169490069 41 GTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACATTCGCCTAACACGCGAAAGGTCCCCG < 41bp 1 0.107601120699649 1 0.160402089357376 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490049 chr3:169490043 . . 0 15 hm5C_associated_SNPs_4579 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490053 + 169490033 169490073 41 TGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTC TGGTTATCACATTCGCCTAACACGCGAAAGGTCCCCGGTTC < 41bp 1 0.51466634533511 1 0.399952441453934 experiment 0.97066730932978 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490053 chr3:169490043 . . 0 11 hm5C_associated_SNPs_4580 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490043 169490043 1 + G A rs569792232 169490057 + 169490037 169490077 41 TATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAA TATCACATTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAA < 41bp 1 0.676363404215157 1 0.442363709211349 experiment 0.647273191569686 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490057 chr3:169490043 . . 0 7 hm5C_associated_SNPs_4581 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490008-169490047
64251 chr3 169490054 169490054 1 + A C rs552675586 169490042 + 169490022 169490062 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTCGCCTAACCCGCGAAAG < 41bp 1 0.123865598569739 1 0.211695104837418 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490042 chr3:169490054 . . 0 33 hm5C_associated_SNPs_4582 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490046 + 169490026 169490066 41 AGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCC AGTGTAGTGGTTATCACGTTCGCCTAACCCGCGAAAGGTCC < 41bp 1 0.333105791902221 1 0.52131712436676 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490046 chr3:169490054 . . 0 29 hm5C_associated_SNPs_4583 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490048 + 169490028 169490068 41 TGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCC TGTAGTGGTTATCACGTTCGCCTAACCCGCGAAAGGTCCCC < 41bp 1 0.171391290614283 1 0.261842250823975 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490048 chr3:169490054 . . 0 27 hm5C_associated_SNPs_4584 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490049 + 169490029 169490069 41 GTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGCCTAACCCGCGAAAGGTCCCCG < 41bp 1 0.09759960451671 1 0.316159844398499 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490049 chr3:169490054 . . 0 26 hm5C_associated_SNPs_4585 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490053 + 169490033 169490073 41 TGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTAACCCGCGAAAGGTCCCCGGTTC < 41bp 1 0.274838430528639 1 0.345695614814758 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490053 chr3:169490054 . . 0 22 hm5C_associated_SNPs_4586 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490057 + 169490037 169490077 41 TATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTAACCCGCGAAAGGTCCCCGGTTCGAAA < 41bp 1 0.549954516647805 1 0.342254340648651 experiment 0.90009096670439 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490057 chr3:169490054 . . 0 18 hm5C_associated_SNPs_4587 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490065 + 169490045 169490085 41 TCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGCCTAACCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGG < 41bp 1 0.505926447298859 1 0.182041585445404 experiment 0.988147105402281 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490065 chr3:169490054 . . 0 10 hm5C_associated_SNPs_4588 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490066 + 169490046 169490086 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA < 41bp 1 0.475675883999849 1 0.26845771074295 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490066 chr3:169490054 . . 0 9 hm5C_associated_SNPs_4589 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490067 + 169490047 169490087 41 GCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GCCTAACCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA < 41bp 1 0.358415161264838 1 0.21893236041069 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490067 chr3:169490054 . . 0 8 hm5C_associated_SNPs_4590 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490068 + 169490048 169490088 41 CCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTAACCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.177789613451769 1 0.115330278873444 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490068 chr3:169490054 . . 0 7 hm5C_associated_SNPs_4591 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490054 169490054 1 + A C rs552675586 169490073 + 169490053 169490093 41 CACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC CCCGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC < 41bp 1 0.457919609766144 1 0.492256194353104 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490073 chr3:169490054 . . 0 2 hm5C_associated_SNPs_4592 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490040 + 169490020 169490060 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAA TTCCGTAGTGTAGTGGTTATCACGTTCGCCTAACAGGCGAA < 41bp 1 0.767035986627416 1 0.423529922962189 experiment 0.465928026745169 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490040 chr3:169490055 . . 0 36 hm5C_associated_SNPs_4593 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490042 + 169490022 169490062 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTCGCCTAACAGGCGAAAG < 41bp 1 0.108138221983604 1 0.0812629163265228 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490042 chr3:169490055 . . 0 34 hm5C_associated_SNPs_4594 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490046 + 169490026 169490066 41 AGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCC AGTGTAGTGGTTATCACGTTCGCCTAACAGGCGAAAGGTCC < 41bp 1 0.329101029222851 1 0.718765914440155 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490046 chr3:169490055 . . 0 30 hm5C_associated_SNPs_4595 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490048 + 169490028 169490068 41 TGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCC TGTAGTGGTTATCACGTTCGCCTAACAGGCGAAAGGTCCCC < 41bp 1 0.200211557004415 1 0.424445420503616 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490048 chr3:169490055 . . 0 28 hm5C_associated_SNPs_4596 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490049 + 169490029 169490069 41 GTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGCCTAACAGGCGAAAGGTCCCCG < 41bp 1 0.120758141210953 1 0.2322096824646 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490049 chr3:169490055 . . 0 27 hm5C_associated_SNPs_4597 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490053 + 169490033 169490073 41 TGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTAACAGGCGAAAGGTCCCCGGTTC < 41bp 1 0.642588125003444 1 0.876091003417969 experiment 0.714823749993111 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490053 chr3:169490055 . . 0 23 hm5C_associated_SNPs_4598 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490057 + 169490037 169490077 41 TATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTAACAGGCGAAAGGTCCCCGGTTCGAAA < 41bp 1 0.600013879089737 1 0.421901941299438 experiment 0.799972241820527 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490057 chr3:169490055 . . 0 19 hm5C_associated_SNPs_4599 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490065 + 169490045 169490085 41 TCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGCCTAACAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGG < 41bp 1 0.505962280462951 1 0.143332213163376 experiment 0.988075439074099 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490065 chr3:169490055 . . 0 11 hm5C_associated_SNPs_4600 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490066 + 169490046 169490086 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA < 41bp 1 0.49418379757346 1 0.171078860759735 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490066 chr3:169490055 . . 0 10 hm5C_associated_SNPs_4601 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490067 + 169490047 169490087 41 GCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GCCTAACAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA < 41bp 1 0.450188851816204 1 0.176401853561401 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490067 chr3:169490055 . . 0 9 hm5C_associated_SNPs_4602 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490068 + 169490048 169490088 41 CCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTAACAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.254243307904496 1 0.0949239432811737 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490068 chr3:169490055 . . 0 8 hm5C_associated_SNPs_4603 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490055 169490055 1 + C G rs145973490 169490073 + 169490053 169490093 41 CACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC CAGGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC < 41bp 1 0.404900009484881 1 0.385351300239563 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490073 chr3:169490055 . . 0 3 hm5C_associated_SNPs_4604 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490042 + 169490022 169490062 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAA < 41bp 1 0.113934918609061 1 0.132335484027863 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490042 chr3:169490062 . . 0 41 hm5C_associated_SNPs_4605 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490046 + 169490026 169490066 41 AGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCC AGTGTAGTGGTTATCACGTTCGCCTAACACGCGAAAAGTCC < 41bp 1 0.304788282603548 1 0.625380396842957 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490046 chr3:169490062 . . 0 37 hm5C_associated_SNPs_4606 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490048 + 169490028 169490068 41 TGTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCC TGTAGTGGTTATCACGTTCGCCTAACACGCGAAAAGTCCCC < 41bp 1 0.170485667713443 1 0.453554034233093 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490048 chr3:169490062 . . 0 35 hm5C_associated_SNPs_4607 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490049 + 169490029 169490069 41 GTAGTGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGCCTAACACGCGAAAAGTCCCCG < 41bp 1 0.095580166997099 1 0.414408445358276 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490049 chr3:169490062 . . 0 34 hm5C_associated_SNPs_4608 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490053 + 169490033 169490073 41 TGGTTATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTAACACGCGAAAAGTCCCCGGTTC < 41bp 1 0.52967054094989 1 0.691196143627167 experiment 0.940658918100219 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490053 chr3:169490062 . . 0 30 hm5C_associated_SNPs_4609 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490057 + 169490037 169490077 41 TATCACGTTCGCCTAACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTAACACGCGAAAAGTCCCCGGTTCGAAA < 41bp 1 0.56816567125336 1 0.462577968835831 experiment 0.86366865749328 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490057 chr3:169490062 . . 0 26 hm5C_associated_SNPs_4610 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490065 + 169490045 169490085 41 TCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGCCTAACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGG < 41bp 1 0.566791607127863 1 0.125611931085587 experiment 0.866416785744274 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490065 chr3:169490062 . . 0 18 hm5C_associated_SNPs_4611 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490066 + 169490046 169490086 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGA < 41bp 1 0.52409017117734 1 0.279835015535355 experiment 0.95181965764532 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490066 chr3:169490062 . . 0 17 hm5C_associated_SNPs_4612 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490067 + 169490047 169490087 41 GCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GCCTAACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAA < 41bp 1 0.360065444638478 1 0.122412204742432 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490067 chr3:169490062 . . 0 16 hm5C_associated_SNPs_4613 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490068 + 169490048 169490088 41 CCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTAACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.210499732138107 1 0.0888582468032837 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490068 chr3:169490062 . . 0 15 hm5C_associated_SNPs_4614 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490073 + 169490053 169490093 41 CACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC CACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAAACACAC < 41bp 1 0.357728563351056 1 0.413989275693893 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490073 chr3:169490062 . . 0 10 hm5C_associated_SNPs_4615 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490078 + 169490058 169490098 41 GAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAA GAAAAGTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAA < 41bp 1 0.379031741697645 1 0.557166874408722 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490078 chr3:169490062 . . 0 5 hm5C_associated_SNPs_4616 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490062 169490062 1 + G A rs372430905 169490079 + 169490059 169490099 41 AAAGGTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAAA AAAAGTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAAA < 41bp 1 0.497418459060271 1 0.857511043548584 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490079 chr3:169490062 . . 0 4 hm5C_associated_SNPs_4617 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:169490040-169490080
64251 chr3 169490083 169490083 1 + C A rs139959878 169490065 + 169490045 169490085 41 TCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGAGG < 41bp 1 0.40243326935254 1 0.123544335365295 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490065 chr3:169490083 . . 0 39 hm5C_associated_SNPs_4618 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490066 + 169490046 169490086 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGAGGA < 41bp 1 0.456975487667191 1 0.168004184961319 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490066 chr3:169490083 . . 0 38 hm5C_associated_SNPs_4619 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490067 + 169490047 169490087 41 GCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGAGGAA < 41bp 1 0.349578114081028 1 0.14426600933075 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490067 chr3:169490083 . . 0 37 hm5C_associated_SNPs_4620 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490068 + 169490048 169490088 41 CCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGAGGAAA < 41bp 1 0.177325987620677 1 0.0625161528587341 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490068 chr3:169490083 . . 0 36 hm5C_associated_SNPs_4621 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490073 + 169490053 169490093 41 CACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACAC CACGCGAAAGGTCCCCGGTTCGAAACCGGGAGGAAACACAC < 41bp 1 0.428677228110758 1 0.702474117279053 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490073 chr3:169490083 . . 0 31 hm5C_associated_SNPs_4622 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490078 + 169490058 169490098 41 GAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACACTAAAA GAAAGGTCCCCGGTTCGAAACCGGGAGGAAACACACTAAAA < 41bp 1 0.429806609611385 1 0.49134173989296 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490078 chr3:169490083 . . 0 26 hm5C_associated_SNPs_4623 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 169490083 169490083 1 + C A rs139959878 169490089 + 169490069 169490109 41 GGTTCGAAACCGGGCGGAAACACACTAAAAAATCCCTTTTT GGTTCGAAACCGGGAGGAAACACACTAAAAAATCCCTTTTT < 41bp 1 0.395840450497159 1 0.354088366031647 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MYNN ENSG00000085274;ENSG00000269889 upstream;downstream Human other chr3:169490089 chr3:169490083 . . 0 15 hm5C_associated_SNPs_4624 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr3:169490060-169490100
64251 chr3 170078470 170078470 1 + G A rs148615745 170078471 + 170078451 170078491 41 ATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT ATTCCCAAGAAAGCATGTCACCTACTGTATTTCTGCCTCTT < 41bp 1 0.135408304022482 1 0.0236924290657043 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170078471 chr3:170078470 synonymous SNV . 0 20 hm5C_associated_SNPs_4625 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:170078461-170078500
64251 chr3 179110163 179110163 1 + T C rs547015615 179110165 + 179110145 179110185 41 GATTCTGAAAAACTCTGCTTCCTGGCATCCAGGAGTTAGAG GATTCTGAAAAACTCTGCCTCCTGGCATCCAGGAGTTAGAG < 41bp 1 0.238835825008237 1 0.175767511129379 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFN1 ENSG00000171109 UTR3 Human protein_coding chr3:179110165 chr3:179110163 . . 0 19 hm5C_associated_SNPs_4628 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:179110149-179110170
64251 chr3 182586930 182586930 1 + G A rs74891936 182586934 + 182586914 182586954 41 GAGTGTAATTGTTCAGGCACCTTCAGGTAACCAATCTAAAC GAGTGTAATTGTTCAGACACCTTCAGGTAACCAATCTAAAC < 41bp 1 0.359853265522258 1 0.111676663160324 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP11B ENSG00000058063 CDS Human protein_coding chr3:182586934 chr3:182586930 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_4630 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:182586910-182586939
64251 chr3 182637840 182637840 1 + C T rs16833596 182637823 + 182637803 182637843 41 AAAATCTCTTATAAAACGTGCATATAACAAAATGACACCCA AAAATCTCTTATAAAACGTGCATATAACAAAATGACATCCA < 41bp 1 0.114805341732163 1 0.0904227197170258 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP11B ENSG00000058063 UTR3 Human protein_coding chr3:182637823 chr3:182637840 . . 0 38 hm5C_associated_SNPs_4631 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:182637836-182637862
64251 chr3 182637840 182637840 1 + C T rs16833596 182637830 + 182637810 182637850 41 CTTATAAAACGTGCATATAACAAAATGACACCCAGTAGGCC CTTATAAAACGTGCATATAACAAAATGACATCCAGTAGGCC < 41bp 1 0.653969070115444 1 0.364926218986511 experiment 0.692061859769113 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP11B ENSG00000058063 UTR3 Human protein_coding chr3:182637830 chr3:182637840 . . 0 31 hm5C_associated_SNPs_4632 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:182637836-182637862
64251 chr3 182637840 182637840 1 + C T rs16833596 182637838 + 182637818 182637858 41 ACGTGCATATAACAAAATGACACCCAGTAGGCCTGCATTAC ACGTGCATATAACAAAATGACATCCAGTAGGCCTGCATTAC < 41bp 1 0.216718212543163 1 0.0123291611671448 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP11B ENSG00000058063 UTR3 Human protein_coding chr3:182637838 chr3:182637840 . . 0 23 hm5C_associated_SNPs_4633 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:182637836-182637862
64251 chr3 182637840 182637840 1 + C T rs16833596 182637841 + 182637821 182637861 41 TGCATATAACAAAATGACACCCAGTAGGCCTGCATTACATT TGCATATAACAAAATGACATCCAGTAGGCCTGCATTACATT < 41bp 1 0.182042600683672 1 0.132571876049042 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP11B ENSG00000058063 UTR3 Human protein_coding chr3:182637841 chr3:182637840 . . 0 20 hm5C_associated_SNPs_4634 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:182637836-182637862
64251 chr3 183169943 183169943 1 + G A rs10937131 183169956 + 183169936 183169976 41 TTCAAGCGATTCTCGTGCCTCAGCCTCCCGAGTAGTAGCTG TTCAAGCAATTCTCGTGCCTCAGCCTCCCGAGTAGTAGCTG < 41bp 1 0.555060519660377 1 0.438773810863495 experiment 0.889878960679245 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LINC00888 ENSG00000240024 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:183169956 chr3:183169943 . . 0 8 hm5C_associated_SNPs_4636 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:183169929-183169955
64251 chr3 183169944 183169944 1 + A G rs10937132 183169956 + 183169936 183169976 41 TTCAAGCGATTCTCGTGCCTCAGCCTCCCGAGTAGTAGCTG TTCAAGCGGTTCTCGTGCCTCAGCCTCCCGAGTAGTAGCTG < 41bp 1 0.643476001260277 1 0.681616902351379 experiment 0.713047997479446 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LINC00888 ENSG00000240024 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:183169956 chr3:183169944 . . 0 9 hm5C_associated_SNPs_4637 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:183169929-183169955
64251 chr3 183508674 183508674 1 + C T rs577343394 183508683 + 183508663 183508703 41 AGCCAGGCCACCGTGGGAACCTGCAAGGCTGCCACCCCCAC AGCCAGGCCACTGTGGGAACCTGCAAGGCTGCCACCCCCAC < 41bp 1 0.797113957547341 1 0.669569075107574 experiment 0.405772084905317 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183508683 chr3:183508674 synonymous SNV . 0 12 hm5C_associated_SNPs_4638 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:183508654-183508683
64251 chr3 183508675 183508675 1 + G A rs150604664 183508683 + 183508663 183508703 41 AGCCAGGCCACCGTGGGAACCTGCAAGGCTGCCACCCCCAC AGCCAGGCCACCATGGGAACCTGCAAGGCTGCCACCCCCAC < 41bp 1 0.765852353022491 1 0.328295737504959 experiment 0.468295293955018 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183508683 chr3:183508675 nonsynonymous SNV 0.990 0 13 hm5C_associated_SNPs_4639 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:183508654-183508683
64251 chr3 183860633 183860633 1 + C T rs148734067 183860652 + 183860632 183860672 41 CCGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAA CTGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAA < 41bp 1 0.118405818070432 1 0.0812154114246368 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860652 chr3:183860633 nonsynonymous SNV 0.996 1 2 hm5C_associated_SNPs_4640 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183860572-183860663
64251 chr3 183860634 183860634 1 + G A rs142361539 183860652 + 183860632 183860672 41 CCGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAA CCAGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAA < 41bp 1 0.120570691136638 1 0.104456424713135 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860652 chr3:183860634 synonymous SNV . 0 3 hm5C_associated_SNPs_4641 1 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183860572-183860663
64251 chr3 183873345 183873345 1 + C G rs540238355 183873349 + 183873329 183873369 41 CCGCTGGGCCGCGCCGCGCGCCGCCGCCGTCTGGGAGGCTC CCGCTGGGCCGCGCCGGGCGCCGCCGCCGTCTGGGAGGCTC < 41bp 1 0.584660753459775 1 0.155757248401642 experiment 0.83067849308045 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DVL3 ENSG00000161202 UTR5 Human protein_coding chr3:183873349 chr3:183873345 . . 0 17 hm5C_associated_SNPs_4642 0 0 5 DDX3X POSTAR2 ENCODE chr3:183873292-183873403
64251 chr3 183873345 183873345 1 + C G rs540238355 183873350 + 183873330 183873370 41 CGCTGGGCCGCGCCGCGCGCCGCCGCCGTCTGGGAGGCTCG CGCTGGGCCGCGCCGGGCGCCGCCGCCGTCTGGGAGGCTCG < 41bp 1 0.68493880807903 1 0.539180874824524 experiment 0.630122383841941 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DVL3 ENSG00000161202 UTR5 Human protein_coding chr3:183873350 chr3:183873345 . . 0 16 hm5C_associated_SNPs_4643 0 0 5 DDX3X POSTAR2 ENCODE chr3:183873292-183873403
64251 chr3 183873345 183873345 1 + C G rs540238355 183873352 + 183873332 183873372 41 CTGGGCCGCGCCGCGCGCCGCCGCCGTCTGGGAGGCTCGGC CTGGGCCGCGCCGGGCGCCGCCGCCGTCTGGGAGGCTCGGC < 41bp 1 0.576523967452739 1 0.636173963546753 experiment 0.846952065094523 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DVL3 ENSG00000161202 UTR5 Human protein_coding chr3:183873352 chr3:183873345 . . 0 14 hm5C_associated_SNPs_4644 0 0 5 DDX3X POSTAR2 ENCODE chr3:183873292-183873403
64251 chr3 183976298 183976298 1 + C T rs374704230 183976295 + 183976275 183976315 41 AAATCCTCTCACCCCCCAGACCTCCCACCTCACCTTGCTTC AAATCCTCTCACCCCCCAGACCTTCCACCTCACCTTGCTTC < 41bp 1 0.00690501015321895 1 0.30447381734848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ECE2 ENSG00000145194 CDS Human protein_coding chr3:183976295 chr3:183976298 nonsynonymous SNV 0.573 0 24 hm5C_associated_SNPs_4645 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:183976282-183976322
64251 chr3 184021193 184021193 1 + T C rs146339706 184021213 + 184021193 184021233 41 TGGCCAAGACAAGCTGCTAACAGATGATGGCAACAAATGGC CGGCCAAGACAAGCTGCTAACAGATGATGGCAACAAATGGC < 41bp 1 0.446646244998647 1 0.692312598228455 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021213 chr3:184021193 synonymous SNV . 0 1 hm5C_associated_SNPs_4646 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184021164-184021229
64251 chr3 184037533 184037533 1 + A G rs13319149 184037529 + 184037509 184037549 41 CAGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAA CAGTTTCCCACTGGCGTGGCCCCCGCCCCAGTTTTGATGAA < 41bp 1 0.263059123502588 1 0.158344894647598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037529 chr3:184037533 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_4654 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184037533 184037533 1 + A G rs13319149 184037530 + 184037510 184037550 41 AGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAAC AGTTTCCCACTGGCGTGGCCCCCGCCCCAGTTTTGATGAAC < 41bp 1 0.203081807191821 1 0.0953438282012939 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037530 chr3:184037533 nonsynonymous SNV 0.953 0 24 hm5C_associated_SNPs_4655 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184037533 184037533 1 + A G rs13319149 184037531 + 184037511 184037551 41 GTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACC GTTTCCCACTGGCGTGGCCCCCGCCCCAGTTTTGATGAACC < 41bp 1 0.148895017017421 1 0.204185217618942 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037531 chr3:184037533 nonsynonymous SNV 0.953 0 23 hm5C_associated_SNPs_4656 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184037533 184037533 1 + A G rs13319149 184037534 + 184037514 184037554 41 TCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACCAGC TCCCACTGGCGTGGCCCCCGCCCCAGTTTTGATGAACCAGC < 41bp 1 0.587679684346808 1 0.319576680660248 experiment 0.824640631306385 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037534 chr3:184037533 nonsynonymous SNV 0.953 0 20 hm5C_associated_SNPs_4657 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184648315 184648315 1 + G A rs74927619 184648321 + 184648301 184648341 41 GACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA GACACAGTGCAGAGAAGAAGCAGTCTGTATGGCAGAAAGCA < 41bp 1 0.110878098228124 1 0.169488281011581 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184648321 chr3:184648315 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_4658 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184648293-184648331
64251 chr3 186505464 186505464 1 + G A rs141842051 186505449 + 186505429 186505469 41 GGTTTTTAAGTAACCTTTGCCAACTTGGGCTATTTGGAAGA GGTTTTTAAGTAACCTTTGCCAACTTGGGCTATTTAGAAGA < 41bp 1 0.327750795224401 1 0.711080968379974 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA4 ENSG00000263776 ncRNA_exonic Human snoRNA chr3:186505449 chr3:186505464 . . 0 36 hm5C_associated_SNPs_4659 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:186505400-186505480
64251 chr3 186505464 186505464 1 + G A rs141842051 186505452 + 186505432 186505472 41 TTTTAAGTAACCTTTGCCAACTTGGGCTATTTGGAAGAGTA TTTTAAGTAACCTTTGCCAACTTGGGCTATTTAGAAGAGTA < 41bp 1 0.364535462381114 1 0.0780524611473083 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA4 ENSG00000263776 ncRNA_exonic Human snoRNA chr3:186505452 chr3:186505464 . . 0 33 hm5C_associated_SNPs_4660 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:186505400-186505480
64251 chr3 186505464 186505464 1 + G A rs141842051 186505458 + 186505438 186505478 41 GTAACCTTTGCCAACTTGGGCTATTTGGAAGAGTAAAAGAC GTAACCTTTGCCAACTTGGGCTATTTAGAAGAGTAAAAGAC < 41bp 1 0.111921719689616 1 0.151142746210098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA4 ENSG00000263776 ncRNA_exonic Human snoRNA chr3:186505458 chr3:186505464 . . 0 27 hm5C_associated_SNPs_4661 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:186505400-186505480
64251 chr3 186795216 186795216 1 + A G rs9716 186795218 + 186795198 186795238 41 CCCCATGTGCTCAAGGGGATCTAATGTTTGGGCTCCAAACT CCCCATGTGCTCAAGGGGGTCTAATGTTTGGGCTCCAAACT < 41bp 1 0.409915968754686 1 0.192925870418549 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ST6GAL1 ENSG00000073849 UTR3 Human protein_coding chr3:186795218 chr3:186795216 . . 0 19 hm5C_associated_SNPs_4662 0 0 2 UPF1 POSTAR2 ENCODE chr3:186795184-186795256
64251 chr3 186795228 186795228 1 + G A rs149008503 186795218 + 186795198 186795238 41 CCCCATGTGCTCAAGGGGATCTAATGTTTGGGCTCCAAACT CCCCATGTGCTCAAGGGGATCTAATGTTTGAGCTCCAAACT < 41bp 1 0.521236412887457 1 0.212711930274963 experiment 0.957527174225085 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ST6GAL1 ENSG00000073849 UTR3 Human protein_coding chr3:186795218 chr3:186795228 . . 0 31 hm5C_associated_SNPs_4663 0 0 2 UPF1 POSTAR2 ENCODE chr3:186795184-186795256
64251 chr3 188601247 188601247 1 + G A rs553027073 188601261 + 188601241 188601281 41 CCGGGCGCGGTGGCTCGTGCCTGTAATCCAGCACTTTGGGA CCGGGCACGGTGGCTCGTGCCTGTAATCCAGCACTTTGGGA < 41bp 1 0.396442502359567 1 0.152731597423553 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPP ENSG00000145012 UTR3 Human protein_coding chr3:188601261 chr3:188601247 . . 0 7 hm5C_associated_SNPs_4686 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:188601233-188601263
64251 chr3 191047298 191047298 1 + G C rs530233231 191047282 + 191047262 191047302 41 CAGCTTGGTGCCTCGGGGACCGTCTCCCGCTGCTTTGGTCA CAGCTTGGTGCCTCGGGGACCGTCTCCCGCTGCTTTCGTCA < 41bp 1 0.432212140166398 1 0.0638598203659058 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC50 ENSG00000152492 UTR5 Human protein_coding chr3:191047282 chr3:191047298 . . 0 37 hm5C_associated_SNPs_4725 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:191047283-191047306
64251 chr3 193336666 193336666 1 + G A rs569675223 193336676 + 193336656 193336696 41 AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCGTG AGGTTCTCCGAAAGAAACGGCGTTTAGAGCAACAGATCGTG < 41bp 1 0.0445000557694014 1 0.0466357469558716 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336676 chr3:193336666 nonsynonymous SNV 0.948 0 11 hm5C_associated_SNPs_4726 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:193336641-193336669
64251 chr3 193413732 193413732 1 + A G rs1056366 193413715 + 193413695 193413735 41 GAGGATATGAAAAAATACTTCCGAAACCAGGAATTCAATGT GAGGATATGAAAAAATACTTCCGAAACCAGGAATTCAGTGT < 41bp 1 0.423971579727278 1 0.204909563064575 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OPA1 ENSG00000198836 UTR3 Human protein_coding chr3:193413715 chr3:193413732 . . 0 38 hm5C_associated_SNPs_4727 1 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:193413728-193413758
64251 chr3 196533524 196533524 1 + C G rs73891516 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCGGTTATTGCCCCGCGACCGGATCATACGAA < 41bp 1 0.512014749522462 1 0.685320615768433 experiment 0.975970500955077 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533524 synonymous SNV . 0 12 hm5C_associated_SNPs_4736 0 0 10 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:196533507-196533530
64251 chr3 196555944 196555944 1 + C T rs529256039 196555929 + 196555909 196555949 41 TTTAACAAATGTGAAAAAGTCAGTTTTAGAAATTTCGTGGT TTTAACAAATGTGAAAAAGTCAGTTTTAGAAATTTTGTGGT < 41bp 1 0.316829395610951 1 0.220136225223541 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PAK2 ENSG00000180370 UTR3 Human protein_coding chr3:196555929 chr3:196555944 . . 0 36 hm5C_associated_SNPs_4737 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:196555925-196555949
64251 chr3 196555958 196555958 1 + C T rs4638940 196555970 + 196555950 196555990 41 AGTAAGTTCGGCATTTGTTACATGTATAGAGAGAAGACTAA AGTAAGTTTGGCATTTGTTACATGTATAGAGAGAAGACTAA < 41bp 1 0.194466348701882 1 0.250046759843826 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PAK2 ENSG00000180370 UTR3 Human protein_coding chr3:196555970 chr3:196555958 . . 0 9 hm5C_associated_SNPs_4738 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:196555931-196555962
64251 chr3 196659648 196659648 1 + A C rs554525400 196659644 + 196659624 196659664 41 TTTTGTGGGGGTGTGGTATACCAAAGTAGCCAGTCACTGGG TTTTGTGGGGGTGTGGTATACCAACGTAGCCAGTCACTGGG < 41bp 1 0.262371285651812 1 0.280370235443115 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SENP5 ENSG00000119231 UTR3 Human protein_coding chr3:196659644 chr3:196659648 . . 0 25 hm5C_associated_SNPs_4739 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714641 chr3:196659435-196659836
64251 chr3 196659660 196659660 1 + C T rs115329141 196659644 + 196659624 196659664 41 TTTTGTGGGGGTGTGGTATACCAAAGTAGCCAGTCACTGGG TTTTGTGGGGGTGTGGTATACCAAAGTAGCCAGTCATTGGG < 41bp 1 0.587307677217112 1 0.417506903409958 experiment 0.825384645565777 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SENP5 ENSG00000119231 UTR3 Human protein_coding chr3:196659644 chr3:196659660 . . 0 37 hm5C_associated_SNPs_4740 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714641 chr3:196659435-196659836
64251 chr3 196669905 196669905 1 + C T rs576269647 196669911 + 196669891 196669931 41 TGGGCTGTGCGGGGCCGAGGCCGCTTGCTTTTCCTTCCGGG TGGGCTGTGCGGGGTCGAGGCCGCTTGCTTTTCCTTCCGGG < 41bp 1 0.283214172327868 1 0.339179337024689 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NCBP2-AS2 ENSG00000270170 ncRNA_exonic Human protein_coding chr3:196669911 chr3:196669905 . . 0 15 hm5C_associated_SNPs_4742 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:196669901-196669922
64251 chr3 196669912 196669912 1 + C T rs335824 196669911 + 196669891 196669931 41 TGGGCTGTGCGGGGCCGAGGCCGCTTGCTTTTCCTTCCGGG TGGGCTGTGCGGGGCCGAGGCTGCTTGCTTTTCCTTCCGGG < 41bp 1 0.496849696852384 1 0.665314018726349 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NCBP2-AS2 ENSG00000270170 ncRNA_exonic Human protein_coding chr3:196669911 chr3:196669912 . . 0 22 hm5C_associated_SNPs_4743 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:196669901-196669922
64251 chr4 502741 502741 1 + G T rs201853289 502758 + 502738 502778 41 TCTGCGTTTGAAAGGAAACCCGGTGAGAATTTAGGAATGTT TCTTCGTTTGAAAGGAAACCCGGTGAGAATTTAGGAATGTT < 41bp 1 0.208129564768793 1 0.322696179151535 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:502758 chr4:502741 nonsynonymous SNV 0.970 0 4 hm5C_associated_SNPs_4746 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr4:502732-502764
64251 chr4 517563 517563 1 + G A rs114931121 517553 + 517533 517573 41 GACAAAGGCCACGGAAGCCCCTCTACCTCCGAAGTGCTCAG GACAAAGGCCACGGAAGCCCCTCTACCTCCAAAGTGCTCAG < 41bp 1 0.688806959241441 1 0.864963412284851 experiment 0.622386081517118 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:517553 chr4:517563 nonsynonymous SNV 0.000 0 31 hm5C_associated_SNPs_4747 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:517536-517572
64251 chr4 727801 727801 1 + C G rs566212866 727818 + 727798 727838 41 GAGCGAAACACAGGAGAGACCCCACATTCCTCCCACGGAGC GAGGGAAACACAGGAGAGACCCCACATTCCTCCCACGGAGC < 41bp 1 0.123600913117592 1 0.419188678264618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCGF3 ENSG00000185619 CDS Human protein_coding chr4:727818 chr4:727801 nonsynonymous SNV 0.000 1 4 hm5C_associated_SNPs_4748 0 0 9 BUD13 POSTAR2 ENCODE chr4:727722-727830
64251 chr4 760480 760480 1 + G A rs116108910 760465 + 760445 760485 41 CTTATGAAACACAACAGCAGCTCCCTGACTGGTTCGCCTTT CTTATGAAACACAACAGCAGCTCCCTGACTGGTTCACCTTT < 41bp 1 0.227666517773723 1 0.135688364505768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCGF3 ENSG00000249592 ncRNA_intronic Human antisense chr4:760465 chr4:760480 . . 0 36 hm5C_associated_SNPs_4749 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr4:760459-760498
64251 chr4 980896 980896 1 + C A rs11248061 980893 + 980873 980913 41 ATGCGTCCCCTGCGCCCCCGCGCCGCGCTGCTGGCGCTCCT ATGCGTCCCCTGCGCCCCCGCGCAGCGCTGCTGGCGCTCCT < 41bp 1 0.628583685358014 1 0.837424397468567 experiment 0.742832629283973 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control IDUA ENSG00000127415 CDS Human protein_coding chr4:980893 chr4:980896 synonymous SNV . 0 24 hm5C_associated_SNPs_4750 2 0 1 GEMIN5 POSTAR2 ENCODE chr4:980832-980898
64251 chr4 980896 980896 1 + C A rs11248061 980895 + 980875 980915 41 GCGTCCCCTGCGCCCCCGCGCCGCGCTGCTGGCGCTCCTGG GCGTCCCCTGCGCCCCCGCGCAGCGCTGCTGGCGCTCCTGG < 41bp 1 0.774562811720372 1 0.674013614654541 experiment 0.450874376559257 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74775;RNA-BisSeq;SNB19;Control IDUA ENSG00000127415 CDS Human protein_coding chr4:980895 chr4:980896 synonymous SNV . 0 22 hm5C_associated_SNPs_4751 2 0 1 GEMIN5 POSTAR2 ENCODE chr4:980832-980898
64251 chr4 1018705 1018705 1 + C A rs4647930 1018696 + 1018676 1018716 41 TCCTCTCGCTCTTGCAGACCCAAAACCGCCAGGGCCACCTG TCCTCTCGCTCTTGCAGACCCAAAACCGCAAGGGCCACCTG < 41bp 1 0.652625270456188 1 0.298353612422943 experiment 0.694749459087623 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1018696 chr4:1018705 nonsynonymous SNV 0.139 2 30 hm5C_associated_SNPs_4755 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr4:1018704-1018705
64251 chr4 1020391 1020391 1 + C G rs4647940 1020400 + 1020380 1020420 41 GCTCATCCCCACTGCATTCTCCCCCTGACACAGAGAAGGGG GCTCATCCCCAGTGCATTCTCCCCCTGACACAGAGAAGGGG < 41bp 1 0.174785395744404 1 0.218363404273987 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FGFRL1 ENSG00000127418 UTR3 Human protein_coding chr4:1020400 chr4:1020391 . . 0 12 hm5C_associated_SNPs_4756 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1020357-1020417
64251 chr4 1020391 1020391 1 + C G rs4647940 1020401 + 1020381 1020421 41 CTCATCCCCACTGCATTCTCCCCCTGACACAGAGAAGGGGC CTCATCCCCAGTGCATTCTCCCCCTGACACAGAGAAGGGGC < 41bp 1 0.152661979850142 1 0.0670932829380035 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FGFRL1 ENSG00000127418 UTR3 Human protein_coding chr4:1020401 chr4:1020391 . . 0 11 hm5C_associated_SNPs_4757 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1020357-1020417
64251 chr4 1020391 1020391 1 + C G rs4647940 1020404 + 1020384 1020424 41 ATCCCCACTGCATTCTCCCCCTGACACAGAGAAGGGGCCTT ATCCCCAGTGCATTCTCCCCCTGACACAGAGAAGGGGCCTT < 41bp 1 0.24346718414168 1 0.0796284675598145 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFRL1 ENSG00000127418 UTR3 Human protein_coding chr4:1020404 chr4:1020391 . . 0 8 hm5C_associated_SNPs_4758 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1020357-1020417
64251 chr4 1020575 1020575 1 + C A rs375839578 1020595 + 1020575 1020615 41 CACCCCACTGTCGTGGTGGCCCCAGATCTCTGTAATTTTAT AACCCCACTGTCGTGGTGGCCCCAGATCTCTGTAATTTTAT < 41bp 1 0.229602402636947 1 0.144010990858078 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFRL1 ENSG00000127418 UTR3 Human protein_coding chr4:1020595 chr4:1020575 . . 0 1 hm5C_associated_SNPs_4759 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:1020518-1020583
64251 chr4 1346960 1346960 1 + C T rs115978884 1346962 + 1346942 1346982 41 TGCCCTTCGCTCCTCCTGCGCGGGCCAGGTGGGCCCCTGCC TGCCCTTCGCTCCTCCTGTGCGGGCCAGGTGGGCCCCTGCC < 41bp 1 0.683621067472592 1 0.921540856361389 experiment 0.632757865054817 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UVSSA ENSG00000163945 CDS Human protein_coding chr4:1346962 chr4:1346960 synonymous SNV . 0 19 hm5C_associated_SNPs_4761 0 0 2 EFTUD2 POSTAR2 ENCODE chr4:1346952-1346992
64251 chr4 1723279 1723279 1 + T C rs3134865 1723295 + 1723275 1723315 41 CAGCTAGGCTTGGCCCCCGGCGTGGAGCAGACGCGGACCCC CAGCCAGGCTTGGCCCCCGGCGTGGAGCAGACGCGGACCCC < 41bp 1 0.592127170555083 1 0.806971907615662 experiment 0.815745658889834 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 UTR5 Human protein_coding chr4:1723295 chr4:1723279 . . 0 5 hm5C_associated_SNPs_4762 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr4:1723240-1723280
64251 chr4 1723292 1723292 1 + C T rs115455600 1723295 + 1723275 1723315 41 CAGCTAGGCTTGGCCCCCGGCGTGGAGCAGACGCGGACCCC CAGCTAGGCTTGGCCCCTGGCGTGGAGCAGACGCGGACCCC < 41bp 1 0.636507250509817 1 0.880255877971649 experiment 0.726985498980367 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 UTR5 Human protein_coding chr4:1723295 chr4:1723292 . . 0 18 hm5C_associated_SNPs_4763 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:1723275-1723302
64251 chr4 1729556 1729556 1 + G A rs34205238 1729555 + 1729535 1729575 41 TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCT TTTGGGAGTGGCAGCTCCAGCAAGTCTGGCCCAGGTGCCCT < 41bp 1 0.655774287980475 1 0.604906797409058 experiment 0.68845142403905 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729555 chr4:1729556 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_4764 0 0 6 EIF3D POSTAR2 ENCODE chr4:1729504-1729581
64251 chr4 1976461 1976461 1 + C T rs548063398 1976452 + 1976432 1976472 41 GGTTTGGGGGTGTCCTGTCTCAGTGGACACAGGACACCACG GGTTTGGGGGTGTCCTGTCTCAGTGGACATAGGACACCACG < 41bp 1 0.585448007996594 1 0.92315149307251 experiment 0.829103984006812 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA22 ENSG00000249784 ncRNA_exonic Human scaRNA chr4:1976452 chr4:1976461 . . 0 30 hm5C_associated_SNPs_4765 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221668 chr4:1976440-1976480
64251 chr4 1976461 1976461 1 + C T rs548063398 1976468 + 1976448 1976488 41 GTCTCAGTGGACACAGGACACCACGGTTTTCAGTACAACAA GTCTCAGTGGACATAGGACACCACGGTTTTCAGTACAACAA < 41bp 1 0.173096050750928 1 0.119853407144547 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA22 ENSG00000249784 ncRNA_exonic Human scaRNA chr4:1976468 chr4:1976461 . . 0 14 hm5C_associated_SNPs_4766 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221668 chr4:1976440-1976480
64251 chr4 1976461 1976461 1 + C T rs548063398 1976469 + 1976449 1976489 41 TCTCAGTGGACACAGGACACCACGGTTTTCAGTACAACAAG TCTCAGTGGACATAGGACACCACGGTTTTCAGTACAACAAG < 41bp 1 0.525765821753527 1 0.147775411605835 experiment 0.948468356492946 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA22 ENSG00000249784 ncRNA_exonic Human scaRNA chr4:1976469 chr4:1976461 . . 0 13 hm5C_associated_SNPs_4767 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221668 chr4:1976440-1976480
64251 chr4 1980784 1980784 1 + C T rs538719785 1980777 + 1980757 1980797 41 CAGGCCTCCTCGGGAGGGAGCGCCTCCCCACCACTGAGCCA CAGGCCTCCTCGGGAGGGAGCGCCTCCTCACCACTGAGCCA < 41bp 1 0.340329577171792 1 0.195168226957321 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1980777 chr4:1980784 . . 0 28 hm5C_associated_SNPs_4768 1 0 1 EIF3H POSTAR2 ENCODE chr4:1980758-1980807
64251 chr4 1981310 1981310 1 + A G rs115893772 1981329 + 1981309 1981349 41 AATAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCAC AGTAACACGTCCACTTTCAACGTGTAGTTTACGCGGAGCAC < 41bp 1 0.170672222259546 1 0.364517033100128 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1981329 chr4:1981310 . . 0 2 hm5C_associated_SNPs_4769 1 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:1981265-1981365
64251 chr4 1983553 1983553 1 + C G rs145672223 1983539 + 1983519 1983559 41 ATGCAAATGACTGTCAGTTGCCAAATATCTTGATCCTATGA ATGCAAATGACTGTCAGTTGCCAAATATCTTGATGCTATGA < 41bp 1 0.073337011409667 1 0.387751668691635 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1983539 chr4:1983553 . . 0 35 hm5C_associated_SNPs_4770 1 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr4:1983490-1983658
64251 chr4 1983556 1983556 1 + A G rs2187692 1983539 + 1983519 1983559 41 ATGCAAATGACTGTCAGTTGCCAAATATCTTGATCCTATGA ATGCAAATGACTGTCAGTTGCCAAATATCTTGATCCTGTGA < 41bp 1 0.080021023279163 1 0.494804263114929 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1983539 chr4:1983556 . . 0 38 hm5C_associated_SNPs_4771 1 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr4:1983490-1983658
64251 chr4 1983731 1983731 1 + A G rs148896652 1983738 + 1983718 1983758 41 TCAGATTCCTTTTAGGAATACTGGGTGCTGTCACCAGGTTT TCAGATTCCTTTTGGGAATACTGGGTGCTGTCACCAGGTTT < 41bp 1 0.225300794367 1 0.508431196212769 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NSD2 ENSG00000109685 UTR3 Human protein_coding chr4:1983738 chr4:1983731 . . 0 14 hm5C_associated_SNPs_4772 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1983571-1983754
64251 chr4 2068648 2068648 1 + C T rs188873748 2068630 + 2068610 2068650 41 GGCGGGAGGGGCTGACAGTGCCTGGGGCCAGAGCTGGGCGA GGCGGGAGGGGCTGACAGTGCCTGGGGCCAGAGCTGGGTGA < 41bp 1 0.522140448663316 1 0.568256497383118 experiment 0.955719102673368 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAT8L ENSG00000185818 UTR3 Human protein_coding chr4:2068630 chr4:2068648 . . 0 39 hm5C_associated_SNPs_4778 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr4:2068627-2068656
64251 chr4 2828225 2828225 1 + C G rs111215831 2828235 + 2828215 2828255 41 GTGTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTC GTGTGCATGTGTGCGTGTTGCTCTGTGTGTGTGTGCATGTC < 41bp 1 0.206887994755783 1 0.0203615128993988 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828235 chr4:2828225 . . 0 11 hm5C_associated_SNPs_4779 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr4:2828154-2828232
64251 chr4 2828225 2828225 1 + C G rs111215831 2828237 + 2828217 2828257 41 GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCG GTGCATGTGTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCG < 41bp 1 0.332861744100005 1 0.0499502122402191 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828237 chr4:2828225 . . 0 9 hm5C_associated_SNPs_4780 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr4:2828154-2828232
64251 chr4 2828236 2828236 1 + T C rs570469517 2828235 + 2828215 2828255 41 GTGTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTC GTGTGCATGTCTGCGTGTTGCCCTGTGTGTGTGTGCATGTC < 41bp 1 0.0974678195896725 1 0.0139634907245636 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828235 chr4:2828236 . . 0 22 hm5C_associated_SNPs_4781 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828236 2828236 1 + T C rs570469517 2828237 + 2828217 2828257 41 GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCG GTGCATGTCTGCGTGTTGCCCTGTGTGTGTGTGCATGTCCG < 41bp 1 0.25807253722578 1 0.0245745480060577 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828237 chr4:2828236 . . 0 20 hm5C_associated_SNPs_4782 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828236 2828236 1 + T C rs570469517 2828250 + 2828230 2828270 41 TGTTGCTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGT TGTTGCCCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGT < 41bp 1 0.119955060479306 1 0.116122007369995 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828250 chr4:2828236 . . 0 7 hm5C_associated_SNPs_4783 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828236 2828236 1 + T C rs570469517 2828255 + 2828235 2828275 41 CTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTG CCCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTG < 41bp 1 0.229505245025922 1 0.261593401432037 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828255 chr4:2828236 . . 0 2 hm5C_associated_SNPs_4784 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828236 2828236 1 + T C rs570469517 2828256 + 2828236 2828276 41 TCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTGT CCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTGT < 41bp 1 0.351161898668822 1 0.382700860500336 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828256 chr4:2828236 . . 0 1 hm5C_associated_SNPs_4785 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828251 2828251 1 + A G rs549512278 2828235 + 2828215 2828255 41 GTGTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTC GTGTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCGTGTC < 41bp 1 0.213711688070963 1 0.0368846654891968 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828235 chr4:2828251 . . 0 37 hm5C_associated_SNPs_4786 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828251 2828251 1 + A G rs549512278 2828237 + 2828217 2828257 41 GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCG GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCGTGTCCG < 41bp 1 0.313473945583135 1 0.044780433177948 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828237 chr4:2828251 . . 0 35 hm5C_associated_SNPs_4787 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828251 2828251 1 + A G rs549512278 2828250 + 2828230 2828270 41 TGTTGCTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGT TGTTGCTCTGTGTGTGTGTGCGTGTCCGCGTGTTGCTCTGT < 41bp 1 0.130084285660752 1 0.143195480108261 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828250 chr4:2828251 . . 0 22 hm5C_associated_SNPs_4788 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828251 2828251 1 + A G rs549512278 2828255 + 2828235 2828275 41 CTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTG CTCTGTGTGTGTGTGCGTGTCCGCGTGTTGCTCTGTGTGTG < 41bp 1 0.191613104455139 1 0.434805661439896 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828255 chr4:2828251 . . 0 17 hm5C_associated_SNPs_4789 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828251 2828251 1 + A G rs549512278 2828256 + 2828236 2828276 41 TCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTGT TCTGTGTGTGTGTGCGTGTCCGCGTGTTGCTCTGTGTGTGT < 41bp 1 0.374353008137513 1 0.431885808706284 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828256 chr4:2828251 . . 0 16 hm5C_associated_SNPs_4790 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828257 2828257 1 + G A rs569678197 2828237 + 2828217 2828257 41 GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCG GTGCATGTCTGCGTGTTGCTCTGTGTGTGTGTGCATGTCCA < 41bp 1 0.289565637485607 1 0.0327355861663818 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828237 chr4:2828257 . . 0 41 hm5C_associated_SNPs_4791 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828257 2828257 1 + G A rs569678197 2828250 + 2828230 2828270 41 TGTTGCTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGT TGTTGCTCTGTGTGTGTGTGCATGTCCACGTGTTGCTCTGT < 41bp 1 0.103239956884579 1 0.140600681304932 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828250 chr4:2828257 . . 0 28 hm5C_associated_SNPs_4792 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828257 2828257 1 + G A rs569678197 2828255 + 2828235 2828275 41 CTCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTG CTCTGTGTGTGTGTGCATGTCCACGTGTTGCTCTGTGTGTG < 41bp 1 0.134202683462391 1 0.11430025100708 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828255 chr4:2828257 . . 0 23 hm5C_associated_SNPs_4793 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828257 2828257 1 + G A rs569678197 2828256 + 2828236 2828276 41 TCTGTGTGTGTGTGCATGTCCGCGTGTTGCTCTGTGTGTGT TCTGTGTGTGTGTGCATGTCCACGTGTTGCTCTGTGTGTGT < 41bp 1 0.296445860510172 1 0.259749680757523 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828256 chr4:2828257 . . 0 22 hm5C_associated_SNPs_4794 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2828206-2828265
64251 chr4 2828527 2828527 1 + G C rs62637096 2828513 + 2828493 2828533 41 CGTGTCCGTGTGTCGCTCGTCTGTGTGTGAACATGTGTGCT CGTGTCCGTGTGTCGCTCGTCTGTGTGTGAACATCTGTGCT < 41bp 1 0.269479193961833 1 0.18495962023735 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SH3BP2 ENSG00000087266 intronic Human protein_coding chr4:2828513 chr4:2828527 . . 0 35 hm5C_associated_SNPs_4795 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr4:2828513-2828534
64251 chr4 2943361 2943361 1 - T C rs1054090 2943341 - 2943321 2943361 41 AAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCACCCG GAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCACCCG < 41bp 1 0.587904340182473 1 0.642295062541962 experiment 0.824191319635053 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOP14 ENSG00000087269 CDS Human protein_coding chr4:2943341 chr4:2943361 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_4796 0 0 1 SF3B1 POSTAR2 ENCODE chr4:2943351-2943373
64251 chr4 3107143 3107143 1 + G C rs368339242 3107132 + 3107112 3107152 41 CCCTGTGGAGGTTTGCTGAGCTGGCTCACCTGGTTCGGCCT CCCTGTGGAGGTTTGCTGAGCTGGCTCACCTCGTTCGGCCT < 41bp 1 0.313303266869334 1 0.379713177680969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3107132 chr4:3107143 synonymous SNV . 0 32 hm5C_associated_SNPs_4800 0 0 9 DDX24 POSTAR2 ENCODE chr4:3107103-3107164
64251 chr4 3148653 3148653 1 + T G rs1143646 3148659 + 3148639 3148679 41 CAAGATGCTTTGATTTTGGCCGGAAACTTGCTTGCAGGTAC CAAGATGCTTTGATGTTGGCCGGAAACTTGCTTGCAGGTAC < 41bp 1 0.332918863776149 1 0.527097404003143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3148659 chr4:3148653 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_4801 0 0 1 PPIG POSTAR2 ENCODE chr4:3148626-3148672
64251 chr4 3242045 3242045 1 + A T rs189003905 3242056 + 3242036 3242076 41 CTGCACCCCATGTGGGTGACCAGGTCCTTTCTCCTGATAGT CTGCACCCCTTGTGGGTGACCAGGTCCTTTCTCCTGATAGT < 41bp 1 0.306941386724044 1 0.603508174419403 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HTT ENSG00000197386 UTR3 Human protein_coding chr4:3242056 chr4:3242045 . . 0 10 hm5C_associated_SNPs_4802 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:3242033-3242063
64251 chr4 3495182 3495182 1 + C A rs77513082 3495163 + 3495143 3495183 41 CAGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCG CAGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTAG < 41bp 1 0.0274156186321667 1 0.0505809485912323 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOK7 ENSG00000175920 CDS Human protein_coding chr4:3495163 chr4:3495182 stopgain 0.351 0 40 hm5C_associated_SNPs_4804 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:3495180-3495212
64251 chr4 3495182 3495182 1 + C A rs77513082 3495164 + 3495144 3495184 41 AGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCGG AGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTAGG < 41bp 1 0.124308604708499 1 0.137749522924423 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOK7 ENSG00000175920 CDS Human protein_coding chr4:3495164 chr4:3495182 stopgain 0.351 0 39 hm5C_associated_SNPs_4805 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:3495180-3495212
64251 chr4 4861547 4861547 1 + C T rs574541297 4861528 + 4861508 4861548 41 GAGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCC GAGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGTC < 41bp 1 0.598349152360744 1 0.384065806865692 experiment 0.803301695278512 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861528 chr4:4861547 . . 0 40 hm5C_associated_SNPs_4806 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861547 4861547 1 + C T rs574541297 4861529 + 4861509 4861549 41 AGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCCG AGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGTCG < 41bp 1 0.723794495762653 1 0.470827966928482 experiment 0.552411008474694 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861529 chr4:4861547 . . 0 39 hm5C_associated_SNPs_4807 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861547 4861547 1 + C T rs574541297 4861535 + 4861515 4861555 41 CGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCCGGCCGCG CGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGTCGGCCGCG < 41bp 1 0.47316596388617 1 0.140233665704727 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861535 chr4:4861547 . . 0 33 hm5C_associated_SNPs_4808 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861547 4861547 1 + C T rs574541297 4861567 + 4861547 4861587 41 CCGGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGG TCGGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGG < 41bp 1 0.781074201798637 1 0.626254439353943 experiment 0.437851596402726 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861567 chr4:4861547 . . 0 1 hm5C_associated_SNPs_4809 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861548 4861548 1 + C A rs540547022 4861528 + 4861508 4861548 41 GAGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCC GAGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCA < 41bp 1 0.595220460979253 1 0.330273568630219 experiment 0.809559078041495 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861528 chr4:4861548 . . 0 41 hm5C_associated_SNPs_4810 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861548 4861548 1 + C A rs540547022 4861529 + 4861509 4861549 41 AGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCCG AGGGTCCGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCAG < 41bp 1 0.742008679830578 1 0.533424854278564 experiment 0.515982640338844 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861529 chr4:4861548 . . 0 40 hm5C_associated_SNPs_4811 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861548 4861548 1 + C A rs540547022 4861535 + 4861515 4861555 41 CGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCCGGCCGCG CGCCCGGCCAGGGCCCCGGGCGCTCGCAGAGGCAGGCCGCG < 41bp 1 0.454239142898698 1 0.0850464701652527 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861535 chr4:4861548 . . 0 34 hm5C_associated_SNPs_4812 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861548 4861548 1 + C A rs540547022 4861567 + 4861547 4861587 41 CCGGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGG CAGGCCGCGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGG < 41bp 1 0.760623377879271 1 0.567261278629303 experiment 0.478753244241458 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861567 chr4:4861548 . . 0 2 hm5C_associated_SNPs_4813 0 0 2 DDX3X POSTAR2 ENCODE chr4:4861487-4861556
64251 chr4 4861569 4861569 1 + C G rs560169358 4861574 + 4861554 4861594 41 CGCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGGCTGGCCA CGCTCCCAGCCCGCCGGGAGCCCATGCCCGGCGGCTGGCCA < 41bp 1 0.499577759355938 1 0.08652064204216 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861574 chr4:4861569 . . 0 16 hm5C_associated_SNPs_4814 0 0 1 DDX3X POSTAR2 ENCODE chr4:4861474-4861613
64251 chr4 4861569 4861569 1 + C G rs560169358 4861575 + 4861555 4861595 41 GCTCCCAGCCCGCCCGGAGCCCATGCCCGGCGGCTGGCCAG GCTCCCAGCCCGCCGGGAGCCCATGCCCGGCGGCTGGCCAG < 41bp 1 0.659398833393772 1 0.0843491554260254 experiment 0.681202333212455 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861575 chr4:4861569 . . 0 15 hm5C_associated_SNPs_4815 0 0 1 DDX3X POSTAR2 ENCODE chr4:4861474-4861613
64251 chr4 4861569 4861569 1 + C G rs560169358 4861576 + 4861556 4861596 41 CTCCCAGCCCGCCCGGAGCCCATGCCCGGCGGCTGGCCAGT CTCCCAGCCCGCCGGGAGCCCATGCCCGGCGGCTGGCCAGT < 41bp 1 0.563591940150538 1 0.101165950298309 experiment 0.872816119698924 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSX1 ENSG00000163132 UTR5 Human protein_coding chr4:4861576 chr4:4861569 . . 0 14 hm5C_associated_SNPs_4816 0 0 1 DDX3X POSTAR2 ENCODE chr4:4861474-4861613
64251 chr4 4861712 4861712 1 + C T rs530217423 4861724 + 4861704 4861744 41 GGGAGGCGCGGGCCAGGCCCCCAGCGCCGCCGCGGCCACGG GGGAGGCGTGGGCCAGGCCCCCAGCGCCGCCGCGGCCACGG < 41bp 1 0.612075343279378 1 0.721540331840515 experiment 0.775849313441244 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSX1 ENSG00000163132 CDS Human protein_coding chr4:4861724 chr4:4861712 nonsynonymous SNV 0.553 1 9 hm5C_associated_SNPs_4817 0 0 1 DDX3X POSTAR2 ENCODE chr4:4861652-4861730
64251 chr4 4865370 4865370 1 + T C rs114279217 4865364 + 4865344 4865384 41 AGGAAGATGAATCCTAGCTTCTTCCATTGGAAAATTTAAGA AGGAAGATGAATCCTAGCTTCTTCCACTGGAAAATTTAAGA < 41bp 1 0.12100844712987 1 0.194604277610779 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSX1 ENSG00000163132 UTR3 Human protein_coding chr4:4865364 chr4:4865370 . . 0 27 hm5C_associated_SNPs_4818 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:4865339-4865372
64251 chr4 5733336 5733336 1 + G A rs113002470 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCCACACCTTCCTCCGGGTGAACGCCTTCCC < 41bp 1 0.0347246375251189 1 0.0503665506839752 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733336 nonsynonymous SNV 0.036 3 14 hm5C_associated_SNPs_4819 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr4 6279191 6279191 1 + C G rs71524363 6279179 + 6279159 6279199 41 ACCTTGACTTTTCTTCCAGGCAGGATGGACTCCAACACTGC ACCTTGACTTTTCTTCCAGGCAGGATGGACTCGAACACTGC < 41bp 1 0.686527627782378 1 0.771250605583191 experiment 0.626944744435244 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WFS1 ENSG00000109501 CDS Human protein_coding chr4:6279179 chr4:6279191 synonymous SNV . 0 33 hm5C_associated_SNPs_4820 0 0 1 DDX3X POSTAR2 ENCODE chr4:6279176-6279253
64251 chr4 6623011 6623011 1 + G A rs140158985 6623015 + 6622995 6623035 41 CACTTTCAACAGCAGTGAGCCCTGGGCAGATGCCCCGGCCC CACTTTCAACAGCAGTAAGCCCTGGGCAGATGCCCCGGCCC < 41bp 1 0.368805863280923 1 0.744836330413818 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN2B2 ENSG00000013288 CDS Human protein_coding chr4:6623015 chr4:6623011 synonymous SNV . 0 17 hm5C_associated_SNPs_4824 0 0 1 UPF1 POSTAR2 ENCODE chr4:6623001-6623040
64251 chr4 6623032 6623032 1 + G T rs4234768 6623015 + 6622995 6623035 41 CACTTTCAACAGCAGTGAGCCCTGGGCAGATGCCCCGGCCC CACTTTCAACAGCAGTGAGCCCTGGGCAGATGCCCCGTCCC < 41bp 1 0.310652737642081 1 0.72528487443924 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN2B2 ENSG00000013288 UTR3 Human protein_coding chr4:6623015 chr4:6623032 . . 0 38 hm5C_associated_SNPs_4825 0 0 1 UPF1 POSTAR2 ENCODE chr4:6623001-6623040
64251 chr4 6642403 6642403 1 + C T rs10023643 6642422 + 6642402 6642442 41 CCGGGACTCCATTTTGTTCGCCGTTACTCTGCGCGTAAGTC CTGGGACTCCATTTTGTTCGCCGTTACTCTGCGCGTAAGTC < 41bp 1 0.217006998880907 1 0.0885703563690186 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRFAP1 ENSG00000179010 UTR5 Human protein_coding chr4:6642422 chr4:6642403 . . 0 2 hm5C_associated_SNPs_4826 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:6642400-6642420
64251 chr4 6642449 6642449 1 + C T rs114420645 6642435 + 6642415 6642455 41 TTGTTCGCCGTTACTCTGCGCGTAAGTCGCTTGTCCGTGGC TTGTTCGCCGTTACTCTGCGCGTAAGTCGCTTGTTCGTGGC < 41bp 1 0.394114333877937 1 0.100601822137833 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRFAP1 ENSG00000179010 UTR5 Human protein_coding chr4:6642435 chr4:6642449 . . 0 35 hm5C_associated_SNPs_4827 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:6642424-6642455
64251 chr4 6695699 6695699 1 + G A rs187031070 6695701 + 6695681 6695721 41 ATGGGCATGATCATAGACGTCTTTTCCCGATATTCGGGCAG ATGGGCATGATCATAGACATCTTTTCCCGATATTCGGGCAG < 41bp 1 0.162907873861205 1 0.0311714708805084 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control S100P ENSG00000163993 CDS Human protein_coding chr4:6695701 chr4:6695699 nonsynonymous SNV 0.011 1 19 hm5C_associated_SNPs_4828 0 0 2 RBM15 POSTAR2 ENCODE chr4:6695690-6695782
64251 chr4 6695708 6695708 1 + C T rs543945473 6695701 + 6695681 6695721 41 ATGGGCATGATCATAGACGTCTTTTCCCGATATTCGGGCAG ATGGGCATGATCATAGACGTCTTTTCCTGATATTCGGGCAG < 41bp 1 0.116052979883941 1 0.0473883450031281 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control S100P ENSG00000163993 CDS Human protein_coding chr4:6695701 chr4:6695708 stopgain 0.002 0 28 hm5C_associated_SNPs_4829 0 0 7 AUH POSTAR2 ENCODE chr4:6695704-6695772
64251 chr4 6925425 6925425 1 + C T rs370873478 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGTGCCTGCGCGC < 41bp 1 0.0197956911004591 1 0.0196303129196167 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925425 synonymous SNV . 0 31 hm5C_associated_SNPs_4830 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr4 6925428 6925428 1 + C T rs553894612 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCTTGCGCGC < 41bp 1 0.0240044670307139 1 0.0225494801998138 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925428 synonymous SNV . 0 34 hm5C_associated_SNPs_4831 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr4 7026923 7026923 1 + C T rs200547397 7026933 + 7026913 7026953 41 AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACG AGGACCTGCCTGCCGAGGAGCTGTTTGCCTCCATCGCCACG < 41bp 1 0.223250279186232 1 0.0250622034072876 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026933 chr4:7026923 synonymous SNV . 0 11 hm5C_associated_SNPs_4832 0 0 1 FXR2 POSTAR2 ENCODE chr4:7026900-7026957
64251 chr4 8238041 8238041 1 + C T rs144056490 8238056 + 8238036 8238076 41 GCAACCGCAAGGCGGAGCTGCGGCTGTGCAACAAGCTGGTG GCAACTGCAAGGCGGAGCTGCGGCTGTGCAACAAGCTGGTG < 41bp 1 0.382037596667522 1 0.136302500963211 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8238056 chr4:8238041 nonsynonymous SNV 0.016 1 6 hm5C_associated_SNPs_4836 0 0 2 EFTUD2 POSTAR2 ENCODE chr4:8237991-8238054
64251 chr4 8238048 8238048 1 + C A rs112207455 8238056 + 8238036 8238076 41 GCAACCGCAAGGCGGAGCTGCGGCTGTGCAACAAGCTGGTG GCAACCGCAAGGAGGAGCTGCGGCTGTGCAACAAGCTGGTG < 41bp 1 0.325029955506117 1 0.127215057611465 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8238056 chr4:8238048 nonsynonymous SNV 0.003 1 13 hm5C_associated_SNPs_4837 0 0 2 EFTUD2 POSTAR2 ENCODE chr4:8237991-8238054
64251 chr4 8238057 8238057 1 + G A rs143995291 8238056 + 8238036 8238076 41 GCAACCGCAAGGCGGAGCTGCGGCTGTGCAACAAGCTGGTG GCAACCGCAAGGCGGAGCTGCAGCTGTGCAACAAGCTGGTG < 41bp 1 0.313265514785709 1 0.102235347032547 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3TC1 ENSG00000125089 CDS Human protein_coding chr4:8238056 chr4:8238057 nonsynonymous SNV 0.763 4 22 hm5C_associated_SNPs_4838 0 0 1 PRPF8 POSTAR2 ENCODE chr4:8237992-8238057
64251 chr4 8478171 8478171 1 + C T rs148044730 8478168 + 8478148 8478188 41 TTTCTCACCACACTGGAGAGCAGCTGCTCTGGAGCAGGGAT TTTCTCACCACACTGGAGAGCAGTTGCTCTGGAGCAGGGAT < 41bp 1 0.128214640036032 1 0.374261647462845 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRMT44 ENSG00000155275 UTR3 Human protein_coding chr4:8478168 chr4:8478171 . . 0 24 hm5C_associated_SNPs_4843 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:8478158-8478188
64251 chr4 20702139 20702139 1 + C A rs533537868 20702150 + 20702130 20702170 41 ACCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCT ACCGAGTGCAGGTCATAAGCCCCCCCCGGTGGGGGGCAGCT < 41bp 1 0.175383928481845 1 0.0657207071781158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702150 chr4:20702139 . . 0 10 hm5C_associated_SNPs_4863 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702092-20702225
64251 chr4 20702139 20702139 1 + C A rs533537868 20702151 + 20702131 20702171 41 CCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTG CCGAGTGCAGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTG < 41bp 1 0.163519613896218 1 0.0559248030185699 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702151 chr4:20702139 . . 0 9 hm5C_associated_SNPs_4864 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702092-20702225
64251 chr4 20702139 20702139 1 + C A rs533537868 20702152 + 20702132 20702172 41 CGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGG CGAGTGCAGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGG < 41bp 1 0.19890841681741 1 0.201973021030426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702152 chr4:20702139 . . 0 8 hm5C_associated_SNPs_4865 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702092-20702225
64251 chr4 20702139 20702139 1 + C A rs533537868 20702153 + 20702133 20702173 41 GAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGT GAGTGCAGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGT < 41bp 1 0.521346255491339 1 0.3326455950737 experiment 0.957307489017323 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702153 chr4:20702139 . . 0 7 hm5C_associated_SNPs_4866 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702092-20702225
64251 chr4 20702139 20702139 1 + C A rs533537868 20702154 + 20702134 20702174 41 AGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGTG AGTGCAGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGTG < 41bp 1 0.564333203168466 1 0.37446391582489 experiment 0.871333593663068 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702154 chr4:20702139 . . 0 6 hm5C_associated_SNPs_4867 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702092-20702225
64251 chr4 20702148 20702148 1 + G A rs558872339 20702150 + 20702130 20702170 41 ACCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCT ACCGAGTGCCGGTCATAAACCCCCCCCGGTGGGGGGCAGCT < 41bp 1 0.223595349833778 1 0.0551818013191223 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702150 chr4:20702148 . . 0 19 hm5C_associated_SNPs_4868 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:20702140-20702160
64251 chr4 20702148 20702148 1 + G A rs558872339 20702151 + 20702131 20702171 41 CCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTG CCGAGTGCCGGTCATAAACCCCCCCCGGTGGGGGGCAGCTG < 41bp 1 0.207310567981003 1 0.0338912904262543 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702151 chr4:20702148 . . 0 18 hm5C_associated_SNPs_4869 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:20702140-20702160
64251 chr4 20702148 20702148 1 + G A rs558872339 20702152 + 20702132 20702172 41 CGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGG CGAGTGCCGGTCATAAACCCCCCCCGGTGGGGGGCAGCTGG < 41bp 1 0.207965134303786 1 0.092889815568924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702152 chr4:20702148 . . 0 17 hm5C_associated_SNPs_4870 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:20702140-20702160
64251 chr4 20702148 20702148 1 + G A rs558872339 20702153 + 20702133 20702173 41 GAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGT GAGTGCCGGTCATAAACCCCCCCCGGTGGGGGGCAGCTGGT < 41bp 1 0.446038842007826 1 0.154254972934723 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702153 chr4:20702148 . . 0 16 hm5C_associated_SNPs_4871 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:20702140-20702160
64251 chr4 20702148 20702148 1 + G A rs558872339 20702154 + 20702134 20702174 41 AGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGTG AGTGCCGGTCATAAACCCCCCCCGGTGGGGGGCAGCTGGTG < 41bp 1 0.547114837931944 1 0.253957271575928 experiment 0.905770324136111 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702154 chr4:20702148 . . 0 15 hm5C_associated_SNPs_4872 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:20702140-20702160
64251 chr4 20702164 20702164 1 + G T rs76783569 20702150 + 20702130 20702170 41 ACCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCT ACCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGTGCAGCT < 41bp 1 0.194410385289672 1 0.14340204000473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702150 chr4:20702164 . . 0 35 hm5C_associated_SNPs_4873 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702148-20702224
64251 chr4 20702164 20702164 1 + G T rs76783569 20702151 + 20702131 20702171 41 CCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTG CCGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGTGCAGCTG < 41bp 1 0.172643919810133 1 0.0760397613048553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702151 chr4:20702164 . . 0 34 hm5C_associated_SNPs_4874 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702148-20702224
64251 chr4 20702164 20702164 1 + G T rs76783569 20702152 + 20702132 20702172 41 CGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGG CGAGTGCCGGTCATAAGCCCCCCCCGGTGGGGTGCAGCTGG < 41bp 1 0.191578060505604 1 0.170005738735199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702152 chr4:20702164 . . 0 33 hm5C_associated_SNPs_4875 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702148-20702224
64251 chr4 20702164 20702164 1 + G T rs76783569 20702153 + 20702133 20702173 41 GAGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGT GAGTGCCGGTCATAAGCCCCCCCCGGTGGGGTGCAGCTGGT < 41bp 1 0.493240522207438 1 0.361355006694794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702153 chr4:20702164 . . 0 32 hm5C_associated_SNPs_4876 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702148-20702224
64251 chr4 20702164 20702164 1 + G T rs76783569 20702154 + 20702134 20702174 41 AGTGCCGGTCATAAGCCCCCCCCGGTGGGGGGCAGCTGGTG AGTGCCGGTCATAAGCCCCCCCCGGTGGGGTGCAGCTGGTG < 41bp 1 0.50890798136697 1 0.323438465595245 experiment 0.982184037266059 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PACRGL ENSG00000163138 UTR5 Human protein_coding chr4:20702154 chr4:20702164 . . 0 31 hm5C_associated_SNPs_4877 0 0 3 DDX3X POSTAR2 ENCODE chr4:20702148-20702224
64251 chr4 25931325 25931325 1 + G A rs554 25931324 + 25931304 25931344 41 CCTCATGCTGAAGATTGCACCGTGTTGGAAAATAAATATGA CCTCATGCTGAAGATTGCACCATGTTGGAAAATAAATATGA < 41bp 1 0.634304062489879 1 0.393335163593292 experiment 0.731391875020242 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMIM20 ENSG00000250317 UTR3 Human protein_coding chr4:25931324 chr4:25931325 . . 0 22 hm5C_associated_SNPs_4878 0 0 1 PUM2 POSTAR2 ENCODE chr4:25931325-25931396
64251 chr4 38139125 38139125 1 + A G rs12644032 38139124 + 38139104 38139144 41 CCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTTTTTG CCAACTTGCAATTCAGGGGGCGTGTCCCAGTGTTTTTTTTG < 41bp 1 0.0737097113028187 1 0.0894413590431213 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TBC1D1 ENSG00000065882 UTR3 Human protein_coding chr4:38139124 chr4:38139125 . . 0 22 hm5C_associated_SNPs_4879 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:38139124-38139148
64251 chr4 38870153 38870153 1 + C T rs139208981 38870133 + 38870113 38870153 41 CGCAGATCCCCAGGCCCCCTCCACCCAGTCGGCTAGCCCTC CGCAGATCCCCAGGCCCCCTCCACCCAGTCGGCTAGCCCTT < 41bp 1 0.279806759754385 1 0.22525429725647 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM114A1 ENSG00000197712 UTR5 Human protein_coding chr4:38870133 chr4:38870153 . . 0 41 hm5C_associated_SNPs_4880 0 0 5 DGCR8 POSTAR2 ENCODE chr4:38870119-38870158
64251 chr4 38937405 38937405 1 + T C rs200908766 38937401 + 38937381 38937421 41 GAAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTAC GAAGTTTACGAATTCTTTAACCACCGTTGGGGTAAGATTAC < 41bp 1 0.0700977826970791 1 0.169721633195877 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937401 chr4:38937405 synonymous SNV . 0 25 hm5C_associated_SNPs_4881 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr4 38937405 38937405 1 + T C rs200908766 38937402 + 38937382 38937422 41 AAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTACA AAGTTTACGAATTCTTTAACCACCGTTGGGGTAAGATTACA < 41bp 1 0.434592959130178 1 0.219931811094284 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937402 chr4:38937405 synonymous SNV . 0 24 hm5C_associated_SNPs_4882 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr4 38945980 38945980 1 + C T rs1809657 38945979 + 38945959 38945999 41 GGGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCA GGGATTACAGGCTTGAGCCACTGCGCCCGGCCGGTCATTCA < 41bp 1 0.713626278445719 1 0.663007259368896 experiment 0.572747443108563 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945979 chr4:38945980 . . 0 22 hm5C_associated_SNPs_4883 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945985 38945985 1 + C T rs542786904 38945979 + 38945959 38945999 41 GGGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCA GGGATTACAGGCTTGAGCCACCGCGCTCGGCCGGTCATTCA < 41bp 1 0.560496675501794 1 0.314551472663879 experiment 0.879006648996412 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945979 chr4:38945985 . . 0 27 hm5C_associated_SNPs_4884 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945985 38945985 1 + C T rs542786904 38945980 + 38945960 38946000 41 GGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCAT GGATTACAGGCTTGAGCCACCGCGCTCGGCCGGTCATTCAT < 41bp 1 0.694016686474967 1 0.218393921852112 experiment 0.611966627050065 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945980 chr4:38945985 . . 0 26 hm5C_associated_SNPs_4885 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945986 38945986 1 + C T rs182843721 38945979 + 38945959 38945999 41 GGGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCA GGGATTACAGGCTTGAGCCACCGCGCCTGGCCGGTCATTCA < 41bp 1 0.470456379625586 1 0.542933285236359 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945979 chr4:38945986 . . 0 28 hm5C_associated_SNPs_4886 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945986 38945986 1 + C T rs182843721 38945980 + 38945960 38946000 41 GGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCAT GGATTACAGGCTTGAGCCACCGCGCCTGGCCGGTCATTCAT < 41bp 1 0.694214135390245 1 0.267263174057007 experiment 0.611571729219511 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945980 chr4:38945986 . . 0 27 hm5C_associated_SNPs_4887 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945987 38945987 1 + G A rs375886768 38945979 + 38945959 38945999 41 GGGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCA GGGATTACAGGCTTGAGCCACCGCGCCCAGCCGGTCATTCA < 41bp 1 0.47088506899926 1 0.292517155408859 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945979 chr4:38945987 . . 0 29 hm5C_associated_SNPs_4888 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38945987 38945987 1 + G A rs375886768 38945980 + 38945960 38946000 41 GGATTACAGGCTTGAGCCACCGCGCCCGGCCGGTCATTCAT GGATTACAGGCTTGAGCCACCGCGCCCAGCCGGTCATTCAT < 41bp 1 0.622988007786643 1 0.312473297119141 experiment 0.754023984426715 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38945980 chr4:38945987 . . 0 28 hm5C_associated_SNPs_4889 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:38945972-38946019
64251 chr4 38946154 38946154 1 + G A rs1139099 38946153 + 38946133 38946173 41 GCCACAGACCAGTACCAGTCCGTGGCACTGGTTAGGAACCA GCCACAGACCAGTACCAGTCCATGGCACTGGTTAGGAACCA < 41bp 1 0.729722019965968 1 0.316072642803192 experiment 0.540555960068065 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 UTR3 Human protein_coding chr4:38946153 chr4:38946154 . . 0 22 hm5C_associated_SNPs_4890 0 0 1 TBRG4 POSTAR2 ENCODE chr4:38946108-38946163
64251 chr4 41652414 41652414 1 + A G rs75351013 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGGCGGGAAAGTCAGTGTGAATGGAGAGACGGT < 41bp 1 0.366368490893377 1 0.487499952316284 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652414 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_4896 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:41652398-41652419
64251 chr4 41652415 41652415 1 + C T rs141393106 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGATGGGAAAGTCAGTGTGAATGGAGAGACGGT < 41bp 1 0.288237151591483 1 0.395561695098877 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652415 synonymous SNV . 0 12 hm5C_associated_SNPs_4897 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:41652398-41652419
64251 chr4 41652442 41652442 1 + G A rs16853408 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACAGT < 41bp 1 0.308046640528971 1 0.355908036231995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652442 synonymous SNV . 0 39 hm5C_associated_SNPs_4898 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr4:41652431-41652452
64251 chr4 41956251 41956251 1 + G A rs6852659 41956252 + 41956232 41956272 41 AGCTACAAATATAGTATAAGCATTATTAGCAGCTGGTACTT AGCTACAAATATAGTATAAACATTATTAGCAGCTGGTACTT < 41bp 1 0.448808931033731 1 0.0460907816886902 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41956252 chr4:41956251 . . 0 20 hm5C_associated_SNPs_4899 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:41956233-41956279
64251 chr4 41956255 41956255 1 + T C rs6835667 41956252 + 41956232 41956272 41 AGCTACAAATATAGTATAAGCATTATTAGCAGCTGGTACTT AGCTACAAATATAGTATAAGCATCATTAGCAGCTGGTACTT < 41bp 1 0.633569975188278 1 0.0768101513385773 experiment 0.732860049623443 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41956252 chr4:41956255 . . 0 24 hm5C_associated_SNPs_4900 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:41956233-41956279
64251 chr4 41958125 41958125 1 + G T rs368797988 41958132 + 41958112 41958152 41 AGCCTCCCGAGTAGCTGGGACTACAGGTGCACGCCACCACG AGCCTCCCGAGTATCTGGGACTACAGGTGCACGCCACCACG < 41bp 1 0.769283082105275 1 0.477192938327789 experiment 0.46143383578945 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958132 chr4:41958125 . . 0 14 hm5C_associated_SNPs_4901 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41958150 41958150 1 + A G rs185882434 41958153 + 41958133 41958173 41 TACAGGTGCACGCCACCACGCCTGTAGTCCCAGCTGTATTG TACAGGTGCACGCCACCGCGCCTGTAGTCCCAGCTGTATTG < 41bp 1 0.165711867844763 1 0.0258899331092834 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958153 chr4:41958150 . . 0 18 hm5C_associated_SNPs_4902 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41958150 41958150 1 + A G rs185882434 41958154 + 41958134 41958174 41 ACAGGTGCACGCCACCACGCCTGTAGTCCCAGCTGTATTGT ACAGGTGCACGCCACCGCGCCTGTAGTCCCAGCTGTATTGT < 41bp 1 0.586195166473339 1 0.157535552978516 experiment 0.827609667053322 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958154 chr4:41958150 . . 0 17 hm5C_associated_SNPs_4903 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41958150 41958150 1 + A G rs185882434 41958161 + 41958141 41958181 41 CACGCCACCACGCCTGTAGTCCCAGCTGTATTGTAAAAATA CACGCCACCGCGCCTGTAGTCCCAGCTGTATTGTAAAAATA < 41bp 1 0.312860136169942 1 0.22474530339241 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958161 chr4:41958150 . . 0 10 hm5C_associated_SNPs_4904 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41958150 41958150 1 + A G rs185882434 41958162 + 41958142 41958182 41 ACGCCACCACGCCTGTAGTCCCAGCTGTATTGTAAAAATAC ACGCCACCGCGCCTGTAGTCCCAGCTGTATTGTAAAAATAC < 41bp 1 0.21727871098607 1 0.13836258649826 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958162 chr4:41958150 . . 0 9 hm5C_associated_SNPs_4905 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41958150 41958150 1 + A G rs185882434 41958163 + 41958143 41958183 41 CGCCACCACGCCTGTAGTCCCAGCTGTATTGTAAAAATACA CGCCACCGCGCCTGTAGTCCCAGCTGTATTGTAAAAATACA < 41bp 1 0.592001861955086 1 0.418429881334305 experiment 0.815996276089829 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41958163 chr4:41958150 . . 0 8 hm5C_associated_SNPs_4906 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:41958119-41958177
64251 chr4 41960828 41960828 1 + C T rs184620372 41960846 + 41960826 41960866 41 AGCGATTCTCATGCCTCAGCCTCCCTAGTAGCTGAGACTAC AGTGATTCTCATGCCTCAGCCTCCCTAGTAGCTGAGACTAC < 41bp 1 0.463120045189858 1 0.792600333690643 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM33 ENSG00000109133 UTR3 Human protein_coding chr4:41960846 chr4:41960828 . . 0 3 hm5C_associated_SNPs_4907 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:41960775-41960829
64251 chr4 42020142 42020142 1 + A G rs2581423 42020141 + 42020121 42020161 41 TTTACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACT TTTACAGCAGAAGGTATAGGCGCAGAACTCAAAGCTCCACT < 41bp 1 0.58267571399461 1 0.182757049798965 experiment 0.83464857201078 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020141 chr4:42020142 nonsynonymous SNV 0.593 0 22 hm5C_associated_SNPs_4908 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr4 42020142 42020142 1 + A G rs2581423 42020143 + 42020123 42020163 41 TACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTA TACAGCAGAAGGTATAGGCGCAGAACTCAAAGCTCCACTTA < 41bp 1 0.702109597892252 1 0.599458336830139 experiment 0.595780804215495 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020143 chr4:42020142 nonsynonymous SNV 0.593 0 20 hm5C_associated_SNPs_4909 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr4 44701446 44701446 1 + A G rs6811584 44701441 + 44701421 44701461 41 GAACTCCTGACCTCGTGATCCACCCACCGTGGCCTCCCAAA GAACTCCTGACCTCGTGATCCACCCGCCGTGGCCTCCCAAA < 41bp 1 0.692745916351935 1 0.0847924947738647 experiment 0.61450816729613 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GUF1 ENSG00000151806 UTR3 Human protein_coding chr4:44701441 chr4:44701446 . . 0 26 hm5C_associated_SNPs_4912 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:44701418-44701458
64251 chr4 44701446 44701446 1 + A G rs6811584 44701443 + 44701423 44701463 41 ACTCCTGACCTCGTGATCCACCCACCGTGGCCTCCCAAAGT ACTCCTGACCTCGTGATCCACCCGCCGTGGCCTCCCAAAGT < 41bp 1 0.537559971866314 1 0.179799288511276 experiment 0.924880056267371 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GUF1 ENSG00000151806 UTR3 Human protein_coding chr4:44701443 chr4:44701446 . . 0 24 hm5C_associated_SNPs_4913 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:44701418-44701458
64251 chr4 44701446 44701446 1 + A G rs6811584 44701444 + 44701424 44701464 41 CTCCTGACCTCGTGATCCACCCACCGTGGCCTCCCAAAGTG CTCCTGACCTCGTGATCCACCCGCCGTGGCCTCCCAAAGTG < 41bp 1 0.568451324752721 1 0.516573786735535 experiment 0.863097350494558 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GUF1 ENSG00000151806 UTR3 Human protein_coding chr4:44701444 chr4:44701446 . . 0 23 hm5C_associated_SNPs_4914 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:44701418-44701458
64251 chr4 48384676 48384676 1 + A G rs375732965 48384660 + 48384640 48384680 41 CAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTG CAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAGCTTG < 41bp 1 0.0262366043777875 1 0.0228224396705627 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384660 chr4:48384676 synonymous SNV . 0 37 hm5C_associated_SNPs_4915 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:48384648-48384677
64251 chr4 53578872 53578872 1 + G A rs535996615 53578864 + 53578844 53578884 41 GGTAGAGCAGCCCTCGGCGGCCCGGGGGGCGGGCGGCGGTG GGTAGAGCAGCCCTCGGCGGCCCGGGGGACGGGCGGCGGTG < 41bp 1 0.354987720734652 1 0.560257077217102 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578864 chr4:53578872 . . 0 29 hm5C_associated_SNPs_4916 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578865 + 53578845 53578885 41 GTAGAGCAGCCCTCGGCGGCCCGGGGGGCGGGCGGCGGTGC GTAGAGCAGCCCTCGGCGGCCCGGGGGACGGGCGGCGGTGC < 41bp 1 0.546670137881179 1 0.941003799438477 experiment 0.906659724237642 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578865 chr4:53578872 . . 0 28 hm5C_associated_SNPs_4917 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578866 + 53578846 53578886 41 TAGAGCAGCCCTCGGCGGCCCGGGGGGCGGGCGGCGGTGCC TAGAGCAGCCCTCGGCGGCCCGGGGGACGGGCGGCGGTGCC < 41bp 1 0.687421151318377 1 0.84432315826416 experiment 0.625157697363245 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578866 chr4:53578872 . . 0 27 hm5C_associated_SNPs_4918 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578873 + 53578853 53578893 41 GCCCTCGGCGGCCCGGGGGGCGGGCGGCGGTGCCCGTCCCG GCCCTCGGCGGCCCGGGGGACGGGCGGCGGTGCCCGTCCCG < 41bp 1 0.561566424069879 1 0.9031662940979 experiment 0.876867151860243 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578873 chr4:53578872 . . 0 20 hm5C_associated_SNPs_4919 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578877 + 53578857 53578897 41 TCGGCGGCCCGGGGGGCGGGCGGCGGTGCCCGTCCCGGGGC TCGGCGGCCCGGGGGACGGGCGGCGGTGCCCGTCCCGGGGC < 41bp 1 0.707276440435253 1 0.815005719661713 experiment 0.585447119129493 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578877 chr4:53578872 . . 0 16 hm5C_associated_SNPs_4920 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578885 + 53578865 53578905 41 CCGGGGGGCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAG CCGGGGGACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAG < 41bp 1 0.238091046481148 1 0.0776444673538208 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578885 chr4:53578872 . . 0 8 hm5C_associated_SNPs_4921 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578886 + 53578866 53578906 41 CGGGGGGCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGG CGGGGGACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGG < 41bp 1 0.121547541602049 1 0.249661684036255 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578886 chr4:53578872 . . 0 7 hm5C_associated_SNPs_4922 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578887 + 53578867 53578907 41 GGGGGGCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGC GGGGGACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGC < 41bp 1 0.270969014438188 1 0.114484041929245 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578887 chr4:53578872 . . 0 6 hm5C_associated_SNPs_4923 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578890 + 53578870 53578910 41 GGGCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACA GGACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACA < 41bp 1 0.395396504962408 1 0.474083453416824 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578890 chr4:53578872 . . 0 3 hm5C_associated_SNPs_4924 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578891 + 53578871 53578911 41 GGCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACAG GACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACAG < 41bp 1 0.469260960383769 1 0.850456833839417 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578891 chr4:53578872 . . 0 2 hm5C_associated_SNPs_4925 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 53578872 53578872 1 + G A rs535996615 53578892 + 53578872 53578912 41 GCGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACAGG ACGGGCGGCGGTGCCCGTCCCGGGGCTGCGCGAGGCACAGG < 41bp 1 0.740465147805117 1 0.850501835346222 experiment 0.519069704389765 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIR4449 ENSG00000264585 ncRNA_exonic Human miRNA chr4:53578892 chr4:53578872 . . 0 1 hm5C_associated_SNPs_4926 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr4:53578840-53578876
64251 chr4 54244053 54244053 1 + G C rs376917506 54244042 + 54244022 54244062 41 TCGAGCGCCTAGTGTCGGAGCTGAGCGGCGGGACCGGAGGG TCGAGCGCCTAGTGTCGGAGCTGAGCGGCGGCACCGGAGGG < 41bp 1 0.737444856188687 1 0.434040933847427 experiment 0.525110287622627 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244042 chr4:54244053 synonymous SNV . 0 32 hm5C_associated_SNPs_4927 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:54244039-54244063
64251 chr4 54244053 54244053 1 + G C rs376917506 54244050 + 54244030 54244070 41 CTAGTGTCGGAGCTGAGCGGCGGGACCGGAGGGGATGAGGA CTAGTGTCGGAGCTGAGCGGCGGCACCGGAGGGGATGAGGA < 41bp 1 0.645264559108542 1 0.528575718402863 experiment 0.709470881782917 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244050 chr4:54244053 synonymous SNV . 0 24 hm5C_associated_SNPs_4928 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:54244039-54244063
64251 chr4 56291565 56291565 1 + T G rs149833286 56291562 + 56291542 56291582 41 GTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATT GTGACAATCATAGGAGGCATCGTGTTTTTGGCGTTTGCATT < 41bp 1 0.360381203371727 1 0.301049590110779 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291562 chr4:56291565 synonymous SNV . 0 24 hm5C_associated_SNPs_4929 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:56291540-56291575
64251 chr4 57326096 57326096 1 + G A rs4132099 57326097 + 57326077 57326117 41 GAGACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGC GAGACAGGGTCTCACTGTCACCCAGGCTGGAGTGCAGTGGC < 41bp 1 0.562057118834187 1 0.184219688177109 experiment 0.875885762331626 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326097 chr4:57326096 . . 0 20 hm5C_associated_SNPs_4933 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr4:57326096-57326097
64251 chr4 57326096 57326096 1 + G A rs4132099 57326098 + 57326078 57326118 41 AGACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCG AGACAGGGTCTCACTGTCACCCAGGCTGGAGTGCAGTGGCG < 41bp 1 0.62917416880416 1 0.436742663383484 experiment 0.74165166239168 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326098 chr4:57326096 . . 0 19 hm5C_associated_SNPs_4934 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr4:57326096-57326097
64251 chr4 57326096 57326096 1 + G A rs4132099 57326099 + 57326079 57326119 41 GACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCGT GACAGGGTCTCACTGTCACCCAGGCTGGAGTGCAGTGGCGT < 41bp 1 0.673954202832945 1 0.76215535402298 experiment 0.65209159433411 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326099 chr4:57326096 . . 0 18 hm5C_associated_SNPs_4935 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr4:57326096-57326097
64251 chr4 57326096 57326096 1 + G A rs4132099 57326111 + 57326091 57326131 41 CTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGTTCA CTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAGTTCA < 41bp 1 0.670981976729997 1 0.285899639129639 experiment 0.658036046540006 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326111 chr4:57326096 . . 0 6 hm5C_associated_SNPs_4936 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr4:57326096-57326097
64251 chr4 57326110 57326110 1 + G A rs551408848 57326097 + 57326077 57326117 41 GAGACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGC GAGACAGGGTCTCACTGTCGCCCAGGCTGGAGTACAGTGGC < 41bp 1 0.53618653401783 1 0.26167756319046 experiment 0.92762693196434 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326097 chr4:57326110 . . 0 34 hm5C_associated_SNPs_4937 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chr4:57326110-57326131
64251 chr4 57326110 57326110 1 + G A rs551408848 57326098 + 57326078 57326118 41 AGACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCG AGACAGGGTCTCACTGTCGCCCAGGCTGGAGTACAGTGGCG < 41bp 1 0.573184581429028 1 0.551058769226074 experiment 0.853630837141944 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326098 chr4:57326110 . . 0 33 hm5C_associated_SNPs_4938 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chr4:57326110-57326131
64251 chr4 57326110 57326110 1 + G A rs551408848 57326099 + 57326079 57326119 41 GACAGGGTCTCACTGTCGCCCAGGCTGGAGTGCAGTGGCGT GACAGGGTCTCACTGTCGCCCAGGCTGGAGTACAGTGGCGT < 41bp 1 0.574920327951481 1 0.645285129547119 experiment 0.850159344097037 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326099 chr4:57326110 . . 0 32 hm5C_associated_SNPs_4939 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chr4:57326110-57326131
64251 chr4 57326110 57326110 1 + G A rs551408848 57326111 + 57326091 57326131 41 CTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGTTCA CTGTCGCCCAGGCTGGAGTACAGTGGCGTGATCTCAGTTCA < 41bp 1 0.687515134499088 1 0.291035145521164 experiment 0.624969731001824 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAICS ENSG00000128050 UTR3 Human protein_coding chr4:57326111 chr4:57326110 . . 0 20 hm5C_associated_SNPs_4940 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chr4:57326110-57326131
64251 chr4 57368327 57368327 1 + A G rs144366294 57368345 + 57368325 57368365 41 ACATACCTTATCTAAGGTTTCCCAGGATTTAAACAGAAACT ACGTACCTTATCTAAGGTTTCCCAGGATTTAAACAGAAACT < 41bp 1 0.314845969262796 1 0.170092672109604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRP72 ENSG00000174780 UTR3 Human protein_coding chr4:57368345 chr4:57368327 . . 0 3 hm5C_associated_SNPs_4941 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:57368291-57368328
64251 chr4 57881715 57881715 1 + G A rs1713982 57881714 + 57881694 57881734 41 GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTA GAGGGAGATTCGGATCTATACAGATGCAGGCCGTATTTGTA < 41bp 1 0.559040904129946 1 0.529812037944794 experiment 0.881918191740108 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57881714 chr4:57881715 synonymous SNV . 0 22 hm5C_associated_SNPs_4942 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57881674-57881738
64251 chr4 75971991 75971991 1 + C T rs546352766 75971979 + 75971959 75971999 41 TGGTTGTTTCTGACAGGATGCTGCCTGCTTGGCTCTACAAG TGGTTGTTTCTGACAGGATGCTGCCTGCTTGGTTCTACAAG < 41bp 1 0.143702906080273 1 0.0968783497810364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARM1 ENSG00000169116 UTR3 Human protein_coding chr4:75971979 chr4:75971991 . . 0 33 hm5C_associated_SNPs_4945 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:75971961-75971992
64251 chr4 75971997 75971997 1 + A G rs10012438 75971979 + 75971959 75971999 41 TGGTTGTTTCTGACAGGATGCTGCCTGCTTGGCTCTACAAG TGGTTGTTTCTGACAGGATGCTGCCTGCTTGGCTCTACGAG < 41bp 1 0.161683747362243 1 0.215281307697296 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARM1 ENSG00000169116 UTR3 Human protein_coding chr4:75971979 chr4:75971997 . . 0 39 hm5C_associated_SNPs_4946 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:75971975-75972007
64251 chr4 76733389 76733389 1 + T C rs188970532 76733394 + 76733374 76733414 41 ATAGTACCATTGCCATTTTACAAACTGAGAAAGACAAACTA ATAGTACCATTGCCACTTTACAAACTGAGAAAGACAAACTA < 41bp 1 0.236632931278719 1 0.383988380432129 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76733394 chr4:76733389 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_4947 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003588 chr4:76733382-76733403
64251 chr4 77661621 77661621 1 + C T rs61739914 77661608 + 77661588 77661628 41 CAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGG CAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGTGCCTCGG < 41bp 1 0.249809931757321 1 0.56812310218811 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661608 chr4:77661621 synonymous SNV . 0 34 hm5C_associated_SNPs_4953 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661621 77661621 1 + C T rs61739914 77661609 + 77661589 77661629 41 AGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGC AGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGTGCCTCGGC < 41bp 1 0.514693402471311 1 0.647889852523804 experiment 0.970613195057379 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661609 chr4:77661621 synonymous SNV . 0 33 hm5C_associated_SNPs_4954 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661621 77661621 1 + C T rs61739914 77661612 + 77661592 77661632 41 CTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCT CTGGGCCGGAGGGGGCCCGGCCCAGGCAGTGCCTCGGCTCT < 41bp 1 0.257335145033593 1 0.207080543041229 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661612 chr4:77661621 synonymous SNV . 0 30 hm5C_associated_SNPs_4955 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661621 77661621 1 + C T rs61739914 77661613 + 77661593 77661633 41 TGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTT TGGGCCGGAGGGGGCCCGGCCCAGGCAGTGCCTCGGCTCTT < 41bp 1 0.400074153694127 1 0.236189782619476 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661613 chr4:77661621 synonymous SNV . 0 29 hm5C_associated_SNPs_4956 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661621 77661621 1 + C T rs61739914 77661614 + 77661594 77661634 41 GGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTC GGGCCGGAGGGGGCCCGGCCCAGGCAGTGCCTCGGCTCTTC < 41bp 1 0.679154304462607 1 0.60331392288208 experiment 0.641691391074786 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661614 chr4:77661621 synonymous SNV . 0 28 hm5C_associated_SNPs_4957 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77676306 77676306 1 + C A rs61741132 77676308 + 77676288 77676328 41 CCCACACTGTATGTGAGGCGCAGCTGGACAGTGAGGATCCC CCCACACTGTATGTGAGGAGCAGCTGGACAGTGAGGATCCC < 41bp 1 0.217914135051298 1 0.146052181720734 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77676308 chr4:77676306 nonsynonymous SNV 0.000 0 19 hm5C_associated_SNPs_4958 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:77676302-77676329
64251 chr4 77676307 77676307 1 + G A rs374194465 77676308 + 77676288 77676328 41 CCCACACTGTATGTGAGGCGCAGCTGGACAGTGAGGATCCC CCCACACTGTATGTGAGGCACAGCTGGACAGTGAGGATCCC < 41bp 1 0.222747218371803 1 0.0705729126930237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77676308 chr4:77676307 synonymous SNV . 0 20 hm5C_associated_SNPs_4959 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:77676302-77676329
64251 chr4 77676309 77676309 1 + A C rs138661793 77676308 + 77676288 77676328 41 CCCACACTGTATGTGAGGCGCAGCTGGACAGTGAGGATCCC CCCACACTGTATGTGAGGCGCCGCTGGACAGTGAGGATCCC < 41bp 1 0.0839438584849766 1 0.0481798946857452 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77676308 chr4:77676309 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_4960 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:77676302-77676329
64251 chr4 79173616 79173616 1 + C A rs147709711 79173606 + 79173586 79173626 41 CTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC CTTGCAATCATGGGGAAGTCCGATGTACCCACCAACCATGC < 41bp 1 0.19566296148871 1 0.71486896276474 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79173606 chr4:79173616 nonsynonymous SNV 0.001 0 31 hm5C_associated_SNPs_4961 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:79173616-79173617
64251 chr4 79293958 79293958 1 + G A rs111554790 79293970 + 79293950 79293990 41 AGGATGGGGCCTGCGTGGAGCAGTGCTTGTCATCATTTTAC AGGATGGGACCTGCGTGGAGCAGTGCTTGTCATCATTTTAC < 41bp 1 0.0989424194073608 1 0.180052816867828 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79293970 chr4:79293958 nonsynonymous SNV 0.004 0 9 hm5C_associated_SNPs_4962 0 0 6 EIF3H POSTAR2 ENCODE chr4:79293939-79293971
64251 chr4 79293960 79293960 1 + C A rs145571470 79293970 + 79293950 79293990 41 AGGATGGGGCCTGCGTGGAGCAGTGCTTGTCATCATTTTAC AGGATGGGGCATGCGTGGAGCAGTGCTTGTCATCATTTTAC < 41bp 1 0.123700252388436 1 0.360542178153992 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79293970 chr4:79293960 synonymous SNV . 0 11 hm5C_associated_SNPs_4963 0 0 6 EIF3H POSTAR2 ENCODE chr4:79293939-79293971
64251 chr4 79437035 79437035 1 + C G rs367736604 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGGGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT < 41bp 1 0.0525757275004126 1 0.107579469680786 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437035 nonsynonymous SNV 0.132 0 3 hm5C_associated_SNPs_4964 0 0 4 EIF3H POSTAR2 ENCODE chr4:79437032-79437036
64251 chr4 79437047 79437047 1 + G A rs34806279 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGCGTGCGAGAGCCAAAGACCATCCAGCTCTACAAACACCT < 41bp 1 0.0560709446886101 1 0.127467393875122 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437047 synonymous SNV . 0 15 hm5C_associated_SNPs_4965 0 0 3 RPS3 POSTAR2 ENCODE chr4:79437007-79437060
64251 chr4 79437056 79437056 1 + C T rs34678339 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGCGTGCGAGAGCCGAAGACCATTCAGCTCTACAAACACCT < 41bp 1 0.0285117368585555 1 0.0897422134876251 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437056 synonymous SNV . 0 24 hm5C_associated_SNPs_4966 1 0 3 RPS3 POSTAR2 ENCODE chr4:79437007-79437060
64251 chr4 79440589 79440589 1 + C A rs149604281 79440588 + 79440568 79440608 41 GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCT GGCCTCCTTGGAGCACCACACAGAGATGGAGTTTTCTTTCT < 41bp 1 0.330424930744883 1 0.669543266296387 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440588 chr4:79440589 synonymous SNV . 0 22 hm5C_associated_SNPs_4967 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 87691080 87691080 1 + G A rs147000473 87691060 + 87691040 87691080 41 CTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTGATG CTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTGATA < 41bp 1 0.246676543665632 1 0.520238995552063 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87691060 chr4:87691080 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_4971 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:87691080-87691100
64251 chr4 88047314 88047314 1 + G A rs139239111 88047316 + 88047296 88047336 41 CCCGCCACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGC CCCGCCACCCGTGTCCTCATCCTCCCAGAAGCCAGCCAAGC < 41bp 1 0.0482817364752648 1 0.261179387569427 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88047316 chr4:88047314 synonymous SNV . 0 19 hm5C_associated_SNPs_4972 0 0 3 GEMIN5 POSTAR2 ENCODE chr4:88047275-88047330
64251 chr4 88047328 88047328 1 + C T rs144038967 88047316 + 88047296 88047336 41 CCCGCCACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGC CCCGCCACCCGTGTCCTCGTCCTCCCAGAAGCTAGCCAAGC < 41bp 1 0.0386403096169114 1 0.310991048812866 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88047316 chr4:88047328 nonsynonymous SNV 0.958 2 33 hm5C_associated_SNPs_4973 0 0 3 GEMIN5 POSTAR2 ENCODE chr4:88047275-88047330
64251 chr4 88997876 88997876 1 + G A rs2725202 88997859 + 88997839 88997879 41 TTAAGAATATAGTACTCGGTCAGGTATGACGGCTCACGCCT TTAAGAATATAGTACTCGGTCAGGTATGACGGCTCACACCT < 41bp 1 0.73554991870531 1 0.463946849107742 experiment 0.528900162589381 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PKD2 ENSG00000118762 UTR3 Human protein_coding chr4:88997859 chr4:88997876 . . 0 38 hm5C_associated_SNPs_4974 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:88997848-88997879
64251 chr4 95373070 95373070 1 + G A rs184767586 95373087 + 95373067 95373107 41 TGGGGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCCTTG TGGAGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCCTTG < 41bp 1 0.768552526201024 1 0.487583756446838 experiment 0.462894947597952 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDLIM5 ENSG00000163110 UTR5 Human protein_coding chr4:95373087 chr4:95373070 . . 0 4 hm5C_associated_SNPs_4975 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:95373053-95373074
64251 chr4 95373086 95373086 1 + G A rs28736374 95373087 + 95373067 95373107 41 TGGGGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCCTTG TGGGGACGGCGCCCTCACCACGAGTCACTTGTCAGCCCTTG < 41bp 1 0.783658947931003 1 0.422379553318024 experiment 0.432682104137994 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDLIM5 ENSG00000163110 UTR5 Human protein_coding chr4:95373087 chr4:95373086 . . 0 20 hm5C_associated_SNPs_4976 0 0 2 DDX3X POSTAR2 ENCODE chr4:95373085-95373147
64251 chr4 95373088 95373088 1 + G C rs147199893 95373087 + 95373067 95373107 41 TGGGGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCCTTG TGGGGACGGCGCCCTCACCGCCAGTCACTTGTCAGCCCTTG < 41bp 1 0.563136084077193 1 0.228128463029861 experiment 0.873727831845614 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDLIM5 ENSG00000163110 UTR5 Human protein_coding chr4:95373087 chr4:95373088 . . 0 22 hm5C_associated_SNPs_4977 0 0 3 DDX3X POSTAR2 ENCODE chr4:95373085-95373147
64251 chr4 95373093 95373093 1 + A C rs555460883 95373087 + 95373067 95373107 41 TGGGGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCCTTG TGGGGACGGCGCCCTCACCGCGAGTCCCTTGTCAGCCCTTG < 41bp 1 0.774573364519095 1 0.676770508289337 experiment 0.450853270961809 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDLIM5 ENSG00000163110 UTR5 Human protein_coding chr4:95373087 chr4:95373093 . . 0 27 hm5C_associated_SNPs_4978 0 0 6 DDX3X POSTAR2 ENCODE chr4:95373092-95373148
64251 chr4 95586405 95586405 1 + C G rs1134984 95586400 + 95586380 95586420 41 ATCCCAGCACTTTGGGAGGCCAAGACGGGCGGATCATGAGG ATCCCAGCACTTTGGGAGGCCAAGAGGGGCGGATCATGAGG < 41bp 1 0.796202212799889 1 0.739863157272339 experiment 0.407595574400222 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDLIM5 ENSG00000163110 UTR3 Human protein_coding chr4:95586400 chr4:95586405 . . 0 26 hm5C_associated_SNPs_4979 0 0 1 FAM120A POSTAR2 ENCODE chr4:95586340-95586406
64251 chr4 95588674 95588674 1 + T C rs12294 95588672 + 95588652 95588692 41 AAAGTGTATGGTAGGATGTGCATAGGTTATATGCAAATACT AAAGTGTATGGTAGGATGTGCACAGGTTATATGCAAATACT < 41bp 1 0.41696788044287 1 0.377562284469604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDLIM5 ENSG00000163110 UTR3 Human protein_coding chr4:95588672 chr4:95588674 . . 0 23 hm5C_associated_SNPs_4980 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr4:95588663-95588684
64251 chr4 103422880 103422880 1 + G A rs539675719 103422878 + 103422858 103422898 41 CCTCTTCCTTCTCCAGCCGGCAGGCCCGCGCCGCTTAGGAG CCTCTTCCTTCTCCAGCCGGCAAGCCCGCGCCGCTTAGGAG < 41bp 1 0.344838631608696 1 0.115247040987015 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC105377621 ENSG00000109320 UTR5 Human protein_coding chr4:103422878 chr4:103422880 . . 0 23 hm5C_associated_SNPs_4981 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr4:103422857-103422880
64251 chr4 103522114 103522114 1 + C T rs4648085 103522101 + 103522081 103522121 41 ATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT ATTCTCAACTTGTGAGGGATCTACTAGAAGTCATATCTGGT < 41bp 1 0.152035769307114 1 0.406553566455841 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103522101 chr4:103522114 nonsynonymous SNV 0.806 0 34 hm5C_associated_SNPs_4982 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:103522092-103522126
64251 chr4 103806563 103806563 1 + T C rs151223492 103806576 + 103806556 103806596 41 CAGCTTATTGTAGGTGTTGGCGTTCTAAAACGGTAAGATGT CAGCTTACTGTAGGTGTTGGCGTTCTAAAACGGTAAGATGT < 41bp 1 0.0697270081996209 1 0.487855136394501 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CISD2 ENSG00000145354 CDS Human protein_coding chr4:103806576 chr4:103806563 synonymous SNV . 0 8 hm5C_associated_SNPs_4983 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:103806495-103806566
64251 chr4 106861764 106861764 1 + G C rs141847563 106861769 + 106861749 106861789 41 GCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT GCAAATGTAAAGAAGCATACCAGGGTGATGGACTGACTTGT < 41bp 1 0.765044867821727 1 0.777466773986816 experiment 0.469910264356547 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPNT ENSG00000168743 CDS Human protein_coding chr4:106861769 chr4:106861764 nonsynonymous SNV 0.962 5 16 hm5C_associated_SNPs_4984 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:106861744-106861771
64251 chr4 107268866 107268866 1 + A G rs185429433 107268858 + 107268838 107268878 41 GGAATCAAATAAAATGCTTCCACTACCAAAAGACATTAGAG GGAATCAAATAAAATGCTTCCACTACCAGAAGACATTAGAG < 41bp 1 0.448018427925817 1 0.330633461475372 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AIMP1 ENSG00000164022 UTR3 Human protein_coding chr4:107268858 chr4:107268866 . . 0 29 hm5C_associated_SNPs_4985 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:107268830-107268869
64251 chr4 109541728 109541728 1 + T G rs185289604 109541732 + 109541712 109541752 41 CTGGCAAAGGCTTTTTTCTTCCTCTTCCGGGGACGTTGTCT CTGGCAAAGGCTTTTTGCTTCCTCTTCCGGGGACGTTGTCT < 41bp 1 0.0636965054956582 1 0.0337621569633484 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL34 ENSG00000109475 UTR5 Human protein_coding chr4:109541732 chr4:109541728 . . 0 17 hm5C_associated_SNPs_4986 0 0 20 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr4:109541716-109541736
64251 chr4 110355129 110355129 1 + G C rs574733736 110355125 + 110355105 110355145 41 GAGCCGCAGCGCCCGCGGGCCCGGGTGCGGGCCCGGCGCCG GAGCCGCAGCGCCCGCGGGCCCGGCTGCGGGCCCGGCGCCG < 41bp 1 0.730883733358563 1 0.651132106781006 experiment 0.538232533282874 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC24B ENSG00000138802 CDS Human protein_coding chr4:110355125 chr4:110355129 nonsynonymous SNV 0.078 0 25 hm5C_associated_SNPs_4987 0 0 4 IGF2BP2 POSTAR2 ENCODE chr4:110355084-110355154
64251 chr4 110355129 110355129 1 + G C rs574733736 110355137 + 110355117 110355157 41 CCGCGGGCCCGGGTGCGGGCCCGGCGCCGCACCAGCAGAAC CCGCGGGCCCGGCTGCGGGCCCGGCGCCGCACCAGCAGAAC < 41bp 1 0.752377022503115 1 0.549386143684387 experiment 0.49524595499377 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC24B ENSG00000138802 CDS Human protein_coding chr4:110355137 chr4:110355129 nonsynonymous SNV 0.078 0 13 hm5C_associated_SNPs_4988 0 0 4 IGF2BP2 POSTAR2 ENCODE chr4:110355084-110355154
64251 chr4 120133918 120133918 1 + T A rs113153547 120133936 + 120133916 120133956 41 GGTGTCGGCGTGAAGCGGGGCTGGGCCAGCGGGAGGTAGCT GGAGTCGGCGTGAAGCGGGGCTGGGCCAGCGGGAGGTAGCT < 41bp 1 0.602273134194318 1 0.305936753749847 experiment 0.795453731611364 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP53 ENSG00000145390 UTR5 Human protein_coding chr4:120133936 chr4:120133918 . . 0 3 hm5C_associated_SNPs_4992 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr4:120133900-120133920
64251 chr4 128748500 128748500 1 + A G rs563636394 128748508 + 128748488 128748528 41 ACATGGAGCATGAAGAGAGACCAAAAGCCTTAAATGACTTG ACATGGAGCATGGAGAGAGACCAAAAGCCTTAAATGACTTG < 41bp 1 0.368924962567058 1 0.323588490486145 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128748508 chr4:128748500 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_4995 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:128748500-128748520
64251 chr4 140265351 140265351 1 + C T rs373862543 140265344 + 140265324 140265364 41 TTATATCCATATACAGACATCCCCTGACAAGGTGGATTATG TTATATCCATATACAGACATCCCCTGATAAGGTGGATTATG < 41bp 1 0.0999704659763345 1 0.0243389010429382 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA15 ENSG00000164134 CDS Human protein_coding chr4:140265344 chr4:140265351 synonymous SNV . 0 28 hm5C_associated_SNPs_4996 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:140265350-140265379
64251 chr4 142142149 142142149 1 + G A rs182929984 142142162 + 142142142 142142182 41 TCCACGAGTTGGATTTACTGCTGTCGCGGGTGGGCCTCACG TCCACGAATTGGATTTACTGCTGTCGCGGGTGGGCCTCACG < 41bp 1 0.391059071901242 1 0.0730695426464081 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF330 ENSG00000109445 UTR5 Human protein_coding chr4:142142162 chr4:142142149 . . 0 8 hm5C_associated_SNPs_4997 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:142142108-142142150
64251 chr4 147096888 147096888 1 + G T rs571469505 147096887 + 147096867 147096907 41 TGCCCCTGCCTCGGCGCTTTCGGTTTTGGCTGGGATCATCC TGCCCCTGCCTCGGCGCTTTCTGTTTTGGCTGGGATCATCC < 41bp 1 0.536083435932735 1 0.0686160326004028 experiment 0.92783312813453 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LSM6 ENSG00000164167 UTR5 Human protein_coding chr4:147096887 chr4:147096888 . . 0 22 hm5C_associated_SNPs_4999 0 0 2 DDX3X POSTAR2 ENCODE chr4:147096887-147096965
64251 chr4 148796253 148796253 1 + C T rs538578376 148796249 + 148796229 148796269 41 AGACAGAATCCCAAGGACCACAAACGAGCAAGTCAGTTTAC AGACAGAATCCCAAGGACCACAAATGAGCAAGTCAGTTTAC < 41bp 1 0.348768857829901 1 0.11086368560791 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP10 ENSG00000071205 CDS Human protein_coding chr4:148796249 chr4:148796253 stopgain 0.997 1 25 hm5C_associated_SNPs_5000 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:148796223-148796257
64251 chr4 154197174 154197174 1 + C A rs536693739 154197184 + 154197164 154197204 41 ACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACGCT ACCTGATGGAAGTGCTGCAGCGAACTCCAGGCAGCAACGCT < 41bp 1 0.248933004515236 1 0.100372076034546 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154197184 chr4:154197174 nonsynonymous SNV 0.992 1 11 hm5C_associated_SNPs_5007 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:154197167-154197193
64251 chr4 159593512 159593512 1 + G A rs183609368 159593523 + 159593503 159593543 41 TTCCGGCAGGTGATGGCGCCCCCCGCGGCCTAGAGGTCCAG TTCCGGCAGATGATGGCGCCCCCCGCGGCCTAGAGGTCCAG < 41bp 1 0.394827936671133 1 0.112759560346603 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ETFDH ENSG00000171503 UTR5 Human protein_coding chr4:159593523 chr4:159593512 . . 0 10 hm5C_associated_SNPs_5008 1 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:159593500-159593520
64251 chr4 160264503 160264503 1 + C A rs188622665 160264487 + 160264467 160264507 41 TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTG TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCAAGTTG < 41bp 1 0.584895992360325 1 0.565217554569244 experiment 0.830208015279351 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160264487 chr4:160264503 nonsynonymous SNV 0.972 1 37 hm5C_associated_SNPs_5009 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:160264475-160264513
64251 chr4 166263534 166263534 1 + A G rs1136537 166263545 + 166263525 166263565 41 TTTTGAGACAAAGCCACACTCTGTCTCCTTGGCTGGAGTGT TTTTGAGACGAAGCCACACTCTGTCTCCTTGGCTGGAGTGT < 41bp 1 0.482927220899833 1 0.101845562458038 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MSMO1 ENSG00000052802 UTR3 Human protein_coding chr4:166263545 chr4:166263534 . . 0 10 hm5C_associated_SNPs_5013 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:166263499-166263547
64251 chr4 174243631 174243631 1 + T C rs3775590 174243630 + 174243610 174243650 41 TGGAAGTTGTGTAGCATTCACTCCCTTACCTACTGGCATTC TGGAAGTTGTGTAGCATTCACCCCCTTACCTACTGGCATTC < 41bp 1 0.394778546325516 1 0.0553660094738007 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GALNT7 ENSG00000248774 ncRNA_exonic Human antisense chr4:174243630 chr4:174243631 . . 0 22 hm5C_associated_SNPs_5017 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:174243620-174243640
64251 chr4 177251500 177251500 1 + A C rs559000193 177251516 + 177251496 177251536 41 GATAAGCCTGCAGTCTTAACCAGACCTGGTACCAGTTTAAC GATACGCCTGCAGTCTTAACCAGACCTGGTACCAGTTTAAC < 41bp 1 0.59925692729521 1 0.873715877532959 experiment 0.80148614540958 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPCS3 ENSG00000129128 UTR3 Human protein_coding chr4:177251516 chr4:177251500 . . 0 5 hm5C_associated_SNPs_5018 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:177251473-177251505
64251 chr4 177251505 177251505 1 + G A rs73871985 177251516 + 177251496 177251536 41 GATAAGCCTGCAGTCTTAACCAGACCTGGTACCAGTTTAAC GATAAGCCTACAGTCTTAACCAGACCTGGTACCAGTTTAAC < 41bp 1 0.579550073990141 1 0.813341379165649 experiment 0.840899852019719 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPCS3 ENSG00000129128 UTR3 Human protein_coding chr4:177251516 chr4:177251505 . . 0 10 hm5C_associated_SNPs_5019 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:177251473-177251505
64251 chr4 177251521 177251521 1 + C T rs143387131 177251516 + 177251496 177251536 41 GATAAGCCTGCAGTCTTAACCAGACCTGGTACCAGTTTAAC GATAAGCCTGCAGTCTTAACCAGACTTGGTACCAGTTTAAC < 41bp 1 0.653632988803227 1 0.848335087299347 experiment 0.692734022393546 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPCS3 ENSG00000129128 UTR3 Human protein_coding chr4:177251516 chr4:177251521 . . 0 26 hm5C_associated_SNPs_5020 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr4:177251488-177251522
64251 chr4 178262679 178262679 1 + G A rs114671957 178262698 + 178262678 178262718 41 CGTCCTAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTG CATCCTAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTG < 41bp 1 0.18914778563661 1 0.282325953245163 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262698 chr4:178262679 nonsynonymous SNV 0.962 2 2 hm5C_associated_SNPs_5026 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:178262673-178262695
64251 chr4 178262683 178262683 1 + T C rs17676249 178262698 + 178262678 178262718 41 CGTCCTAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTG CGTCCCAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTG < 41bp 1 0.204619198882386 1 0.377485007047653 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262698 chr4:178262683 synonymous SNV . 0 6 hm5C_associated_SNPs_5027 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:178262673-178262695
64251 chr4 178262683 178262683 1 + T C rs17676249 178262701 + 178262681 178262721 41 CCTAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTGCCG CCCAATTGTGGTCAGTGCCACTGCAGAATAACTGTGTGCCG < 41bp 1 0.778568766964739 1 0.388979643583298 experiment 0.442862466070521 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262701 chr4:178262683 synonymous SNV . 0 3 hm5C_associated_SNPs_5028 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:178262673-178262695
64251 chr5 223669 223669 1 + A G rs144599870 223682 + 223662 223702 41 ATCTGCTAAAGTTTCAGATTCCGTAAGTTCATGCTTTTTGT ATCTGCTGAAGTTTCAGATTCCGTAAGTTCATGCTTTTTGT < 41bp 1 0.201893477144209 1 0.0791900455951691 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:223682 chr5:223669 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_5035 4 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:223611-223671
64251 chr5 223679 223679 1 + A G rs80207011 223682 + 223662 223702 41 ATCTGCTAAAGTTTCAGATTCCGTAAGTTCATGCTTTTTGT ATCTGCTAAAGTTTCAGGTTCCGTAAGTTCATGCTTTTTGT < 41bp 1 0.127234043864254 1 0.0692955255508423 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:223682 chr5:223679 nonsynonymous SNV 0.969 0 18 hm5C_associated_SNPs_5036 4 0 2 FTO POSTAR2 ENCODE chr5:223591-223683
64251 chr5 467102 467102 1 + C T rs147989056 467121 + 467101 467141 41 ACGTGCTCCTTTTAGCTGCACGGCCTGTCTTTAGGTGCCAG ATGTGCTCCTTTTAGCTGCACGGCCTGTCTTTAGGTGCCAG < 41bp 1 0.452682299486066 1 0.112793833017349 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXOC3 ENSG00000180104 UTR3 Human protein_coding chr5:467121 chr5:467102 . . 0 2 hm5C_associated_SNPs_5038 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:467068-467103
64251 chr5 917878 917878 1 + A G rs14389 917877 + 917857 917897 41 CCAGGGAAACACATGCTGGACATCCCTTGTAACCCGGTATG CCAGGGAAACACATGCTGGACGTCCCTTGTAACCCGGTATG < 41bp 1 0.362124162255749 1 0.0444660186767578 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP13 ENSG00000071539 UTR3 Human protein_coding chr5:917877 chr5:917878 . . 0 22 hm5C_associated_SNPs_5039 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:917836-917886
64251 chr5 5457693 5457693 1 + G A rs76783275 5457687 + 5457667 5457707 41 AGGTTTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA AGGTTTTAGTACAAAGTCATCGTGACAGTGGTAGTACTGAA < 41bp 1 0.390011913908121 1 0.335236787796021 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5457687 chr5:5457693 nonsynonymous SNV 0.000 0 27 hm5C_associated_SNPs_5043 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:5457678-5457717
64251 chr5 6746335 6746335 1 + A G rs529673619 6746347 + 6746327 6746367 41 TTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT TTGCATCCGAGAATTGATGCCCGGAGAGCTGATGAAAACCT < 41bp 1 0.482669912636928 1 0.39286869764328 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746347 chr5:6746335 synonymous SNV . 0 9 hm5C_associated_SNPs_5051 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr5:6746320-6746340
64251 chr5 6755444 6755444 1 + G A rs28381436 6755432 + 6755412 6755452 41 GTCAAAGCAGCAGAGGAGATCAAACCCCGTTCGTGTGTCTT GTCAAAGCAGCAGAGGAGATCAAACCCCGTTCATGTGTCTT < 41bp 1 0.194974955747471 1 0.345440566539764 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6755432 chr5:6755444 . . 0 33 hm5C_associated_SNPs_5052 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:6755418-6755444
64251 chr5 6756660 6756660 1 + G A rs560636604 6756649 + 6756629 6756669 41 TAAAATGTCTGCGGTCTGCCCTTTTGAAGCAGGACTGGCTC TAAAATGTCTGCGGTCTGCCCTTTTGAAGCAAGACTGGCTC < 41bp 1 0.245398419696499 1 0.0783184766769409 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPD7 ENSG00000112941 UTR3 Human protein_coding chr5:6756649 chr5:6756660 . . 0 32 hm5C_associated_SNPs_5053 0 0 21 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:6756629-6756664
64251 chr5 7878179 7878179 1 + C T rs1532268 7878185 + 7878165 7878205 41 ATCACCTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGC ATCACCTGCATCCTTGAGGACAGACCTTGTGAAGTCAGAGC < 41bp 1 0.294106688942909 1 0.118183344602585 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878185 chr5:7878179 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_5054 3 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:7878144-7878187
64251 chr5 7878179 7878179 1 + C T rs1532268 7878190 + 7878170 7878210 41 CTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGCTGCTA CTGCATCCTTGAGGACAGACCTTGTGAAGTCAGAGCTGCTA < 41bp 1 0.527960337593946 1 0.0478578209877014 experiment 0.944079324812107 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878190 chr5:7878179 nonsynonymous SNV 0.000 0 10 hm5C_associated_SNPs_5055 3 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:7878144-7878187
64251 chr5 7878192 7878192 1 + T C rs161870 7878185 + 7878165 7878205 41 ATCACCTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGC ATCACCTGCATCCTCGAGGACAGACCTCGTGAAGTCAGAGC < 41bp 1 0.31597843021336 1 0.215250194072723 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878185 chr5:7878192 synonymous SNV . 0 28 hm5C_associated_SNPs_5056 2 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:7878158-7878193
64251 chr5 7878192 7878192 1 + T C rs161870 7878190 + 7878170 7878210 41 CTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGCTGCTA CTGCATCCTCGAGGACAGACCTCGTGAAGTCAGAGCTGCTA < 41bp 1 0.779532142881272 1 0.31788170337677 experiment 0.440935714237457 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878190 chr5:7878192 synonymous SNV . 0 23 hm5C_associated_SNPs_5057 2 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:7878158-7878193
64251 chr5 7885868 7885868 1 + A G rs199762141 7885852 + 7885832 7885872 41 CAGCCTGGAGATGCCTTCAGCGTGATCTGCCCTAACAGTGA CAGCCTGGAGATGCCTTCAGCGTGATCTGCCCTAACGGTGA < 41bp 1 0.743973287637513 1 0.441746652126312 experiment 0.512053424724973 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885852 chr5:7885868 nonsynonymous SNV 0.990 1 37 hm5C_associated_SNPs_5058 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:7885847-7885869
64251 chr5 7885868 7885868 1 + A G rs199762141 7885861 + 7885841 7885881 41 GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGT GATGCCTTCAGCGTGATCTGCCCTAACGGTGATTCTGAGGT < 41bp 1 0.273177328661213 1 0.0423588454723358 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885861 chr5:7885868 nonsynonymous SNV 0.990 1 28 hm5C_associated_SNPs_5059 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:7885847-7885869
64251 chr5 7885868 7885868 1 + A G rs199762141 7885862 + 7885842 7885882 41 ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTA ATGCCTTCAGCGTGATCTGCCCTAACGGTGATTCTGAGGTA < 41bp 1 0.22388191637724 1 0.0582344830036163 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885862 chr5:7885868 nonsynonymous SNV 0.990 1 27 hm5C_associated_SNPs_5060 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:7885847-7885869
64251 chr5 7885868 7885868 1 + A G rs199762141 7885863 + 7885843 7885883 41 TGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTAC TGCCTTCAGCGTGATCTGCCCTAACGGTGATTCTGAGGTAC < 41bp 1 0.362801821652662 1 0.0843493044376373 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885863 chr5:7885868 nonsynonymous SNV 0.990 1 26 hm5C_associated_SNPs_5061 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:7885847-7885869
64251 chr5 7889304 7889304 1 + C T rs2287780 7889293 + 7889273 7889313 41 GTGCAGTAAACAAGGGGCAGCCGATTATAGCCGCTTTGTAC GTGCAGTAAACAAGGGGCAGCCGATTATAGCTGCTTTGTAC < 41bp 1 0.225766639492119 1 0.274121224880219 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7889293 chr5:7889304 nonsynonymous SNV 0.029 3 32 hm5C_associated_SNPs_5062 2 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:7889298-7889340
64251 chr5 7897283 7897283 1 + G A rs12347 7897284 + 7897264 7897304 41 AAGCCCCAGCAAAGTATGTGCAAGACAACATCCAGCTTCAT AAGCCCCAGCAAAGTATGTACAAGACAACATCCAGCTTCAT < 41bp 1 0.722848673418163 1 0.100762814283371 experiment 0.554302653163674 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7897284 chr5:7897283 synonymous SNV . 0 20 hm5C_associated_SNPs_5063 2 0 1 PPIG POSTAR2 ENCODE chr5:7897190-7897348
64251 chr5 10387149 10387149 1 + A G rs141255096 10387150 + 10387130 10387170 41 CTGGCTCCGTGAGCTCACTACTGACGCTGCCATTAGATATG CTGGCTCCGTGAGCTCACTGCTGACGCTGCCATTAGATATG < 41bp 1 0.244900847497189 1 0.201313078403473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10387150 chr5:10387149 synonymous SNV . 0 20 hm5C_associated_SNPs_5064 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10387142-10387165
64251 chr5 10387161 10387161 1 + A G rs116788481 10387150 + 10387130 10387170 41 CTGGCTCCGTGAGCTCACTACTGACGCTGCCATTAGATATG CTGGCTCCGTGAGCTCACTACTGACGCTGCCGTTAGATATG < 41bp 1 0.267860563345976 1 0.126073837280273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10387150 chr5:10387161 synonymous SNV . 0 32 hm5C_associated_SNPs_5065 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10387142-10387165
64251 chr5 10415633 10415633 1 + C T rs182494860 10415639 + 10415619 10415659 41 AATGTCGTTTTGGACGGGGACTGCCAAAATCCATGAGCTCT AATGTCGTTTTGGATGGGGACTGCCAAAATCCATGAGCTCT < 41bp 1 0.217237135751908 1 0.25016313791275 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10415639 chr5:10415633 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_5066 0 0 35 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10415620-10415660
64251 chr5 10417411 10417411 1 + G A rs541401299 10417426 + 10417406 10417446 41 GTGCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCT GTGCTATTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCT < 41bp 1 0.156095133399883 1 0.11194971203804 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10417426 chr5:10417411 synonymous SNV . 0 6 hm5C_associated_SNPs_5067 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10417381-10417433
64251 chr5 10417411 10417411 1 + G A rs541401299 10417428 + 10417408 10417448 41 GCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCTGT GCTATTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCTGT < 41bp 1 0.246887226673128 1 0.0339217782020569 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10417428 chr5:10417411 synonymous SNV . 0 4 hm5C_associated_SNPs_5068 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10417381-10417433
64251 chr5 14498727 14498727 1 + G A rs26107 14498746 + 14498726 14498766 41 CGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG CATCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG < 41bp 1 0.396297213766268 1 0.20679646730423 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14498746 chr5:14498727 synonymous SNV . 0 2 hm5C_associated_SNPs_5075 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14498717-14498739
64251 chr5 14509307 14509307 1 + G A rs545046313 14509308 + 14509288 14509328 41 CCGTCAATCAGATTGTGGAGCAGTACACAGTCAGATGAAAA CCGTCAATCAGATTGTGGAACAGTACACAGTCAGATGAAAA < 41bp 1 0.208821925751382 1 0.24925896525383 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIO ENSG00000038382 UTR3 Human protein_coding chr5:14509308 chr5:14509307 . . 0 20 hm5C_associated_SNPs_5076 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:14509292-14509308
64251 chr5 14664821 14664821 1 + G A rs250435 14664822 + 14664802 14664842 41 GCGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCG GCGCGGAAGCGCTCTGCGGACCCTCGGAAACCGCCCCGGCG < 41bp 1 0.287754090876721 1 0.112737596035004 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664822 chr5:14664821 . . 0 20 hm5C_associated_SNPs_5077 0 0 2 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14664821 14664821 1 + G A rs250435 14664823 + 14664803 14664843 41 CGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCGG CGCGGAAGCGCTCTGCGGACCCTCGGAAACCGCCCCGGCGG < 41bp 1 0.460752508142792 1 0.189178466796875 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664823 chr5:14664821 . . 0 19 hm5C_associated_SNPs_5078 0 0 2 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14664833 14664833 1 + C G rs181297196 14664822 + 14664802 14664842 41 GCGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCG GCGCGGAAGCGCTCTGCGGGCCCTCGGAAACGGCCCCGGCG < 41bp 1 0.283371414713013 1 0.173252373933792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664822 chr5:14664833 . . 0 32 hm5C_associated_SNPs_5079 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14664833 14664833 1 + C G rs181297196 14664823 + 14664803 14664843 41 CGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCGG CGCGGAAGCGCTCTGCGGGCCCTCGGAAACGGCCCCGGCGG < 41bp 1 0.380624000723188 1 0.215043604373932 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664823 chr5:14664833 . . 0 31 hm5C_associated_SNPs_5080 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14664838 14664838 1 + C G rs560512097 14664822 + 14664802 14664842 41 GCGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCG GCGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCGGGCG < 41bp 1 0.280923132378876 1 0.130129665136337 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664822 chr5:14664838 . . 0 37 hm5C_associated_SNPs_5081 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14664838 14664838 1 + C G rs560512097 14664823 + 14664803 14664843 41 CGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCCGGCGG CGCGGAAGCGCTCTGCGGGCCCTCGGAAACCGCCCGGGCGG < 41bp 1 0.36381087674558 1 0.194196671247482 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664823 chr5:14664838 . . 0 36 hm5C_associated_SNPs_5082 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr5 14697846 14697846 1 + A G rs186113088 14697842 + 14697822 14697862 41 GGAGGAGGACACTGTGTTTTCTCAATTAATCTCATTGATTT GGAGGAGGACACTGTGTTTTCTCAGTTAATCTCATTGATTT < 41bp 1 0.565311045440879 1 0.448173761367798 experiment 0.869377909118243 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14697842 chr5:14697846 . . 0 25 hm5C_associated_SNPs_5083 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr5:14697828-14697849
64251 chr5 14697849 14697849 1 + A G rs6886163 14697842 + 14697822 14697862 41 GGAGGAGGACACTGTGTTTTCTCAATTAATCTCATTGATTT GGAGGAGGACACTGTGTTTTCTCAATTGATCTCATTGATTT < 41bp 1 0.677974251554562 1 0.893683731555939 experiment 0.644051496890877 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14697842 chr5:14697849 . . 0 28 hm5C_associated_SNPs_5084 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr5:14697828-14697849
64251 chr5 14697852 14697852 1 + C G rs115684402 14697842 + 14697822 14697862 41 GGAGGAGGACACTGTGTTTTCTCAATTAATCTCATTGATTT GGAGGAGGACACTGTGTTTTCTCAATTAATGTCATTGATTT < 41bp 1 0.64991647681023 1 0.941999614238739 experiment 0.70016704637954 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14697842 chr5:14697852 . . 0 31 hm5C_associated_SNPs_5085 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr5:14697829-14697884
64251 chr5 14698453 14698453 1 + C T rs3747697 14698463 + 14698443 14698483 41 TAAGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTCTGAA TAAGATGTTCTGCATGTGTCCAAAATTTCGCCTGCTCTGAA < 41bp 1 0.566592991609904 1 0.39494526386261 experiment 0.866814016780192 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14698463 chr5:14698453 . . 0 11 hm5C_associated_SNPs_5086 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:14698434-14698458
64251 chr5 14698472 14698472 1 + G A rs60501770 14698463 + 14698443 14698483 41 TAAGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTCTGAA TAAGATGTTCCGCATGTGTCCAAAATTTCACCTGCTCTGAA < 41bp 1 0.578220106130297 1 0.196766793727875 experiment 0.843559787739407 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTULIN ENSG00000154124 UTR3 Human protein_coding chr5:14698463 chr5:14698472 . . 0 30 hm5C_associated_SNPs_5087 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:14698453-14698474
64251 chr5 17275364 17275364 1 + T C rs73756114 17275370 + 17275350 17275390 41 AAGAAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAA AAGAAGGGCTACAACGTGAACGACGAGAAAGCCAAGGAGAA < 41bp 1 0.565068357713128 1 0.281786471605301 experiment 0.869863284573745 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275370 chr5:17275364 synonymous SNV . 0 15 hm5C_associated_SNPs_5090 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275364 17275364 1 + T C rs73756114 17275373 + 17275353 17275393 41 AAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAAAGA AAGGGCTACAACGTGAACGACGAGAAAGCCAAGGAGAAAGA < 41bp 1 0.768019088315424 1 0.482091397047043 experiment 0.463961823369153 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275373 chr5:17275364 synonymous SNV . 0 12 hm5C_associated_SNPs_5091 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275364 17275364 1 + T C rs73756114 17275381 + 17275361 17275401 41 CAATGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG CAACGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG < 41bp 1 0.391878789732413 1 0.413183331489563 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275381 chr5:17275364 synonymous SNV . 0 4 hm5C_associated_SNPs_5092 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275552 17275552 1 + C T rs3733748 17275570 + 17275550 17275590 41 GGCGGCTGCCAAGGAGGAGGCCCCGAAGGCGGAGCCCGAGA GGTGGCTGCCAAGGAGGAGGCCCCGAAGGCGGAGCCCGAGA < 41bp 1 0.715814848334861 1 0.53254246711731 experiment 0.568370303330279 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275570 chr5:17275552 nonsynonymous SNV 0.432 1 3 hm5C_associated_SNPs_5093 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:17275534-17275555
64251 chr5 17275552 17275552 1 + C T rs3733748 17275572 + 17275552 17275592 41 CGGCTGCCAAGGAGGAGGCCCCGAAGGCGGAGCCCGAGAAG TGGCTGCCAAGGAGGAGGCCCCGAAGGCGGAGCCCGAGAAG < 41bp 1 0.654850948337467 1 0.333418726921082 experiment 0.690298103325066 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275572 chr5:17275552 nonsynonymous SNV 0.432 1 1 hm5C_associated_SNPs_5094 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:17275534-17275555
64251 chr5 33441128 33441128 1 + C T rs149737496 33441138 + 33441118 33441158 41 ACCTCCCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCG ACCTCCCACCTGCCTCTTGGCTCCTCTCCTCTAGGCCGTCG < 41bp 1 0.507696599454859 1 0.0635400414466858 experiment 0.984606801090282 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 UTR5 Human protein_coding chr5:33441138 chr5:33441128 . . 0 11 hm5C_associated_SNPs_5099 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585670 chr5:33441101-33441129
64251 chr5 33441128 33441128 1 + C T rs149737496 33441143 + 33441123 33441163 41 CCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCGCTTTC CCACCTGCCTCTTGGCTCCTCTCCTCTAGGCCGTCGCTTTC < 41bp 1 0.521078208070689 1 0.276527166366577 experiment 0.957843583858622 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 UTR5 Human protein_coding chr5:33441143 chr5:33441128 . . 0 6 hm5C_associated_SNPs_5100 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585670 chr5:33441101-33441129
64251 chr5 33441150 33441150 1 + A G rs75248757 33441138 + 33441118 33441158 41 ACCTCCCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCG ACCTCCCACCCGCCTCTTGGCTCCTCTCCTCTGGGCCGTCG < 41bp 1 0.535635659048761 1 0.112990647554398 experiment 0.928728681902478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 splicing Human protein_coding chr5:33441138 chr5:33441150 . . 0 33 hm5C_associated_SNPs_5101 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33441150 33441150 1 + A G rs75248757 33441143 + 33441123 33441163 41 CCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCGCTTTC CCACCCGCCTCTTGGCTCCTCTCCTCTGGGCCGTCGCTTTC < 41bp 1 0.545072483800683 1 0.153971761465073 experiment 0.909855032398634 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 splicing Human protein_coding chr5:33441143 chr5:33441150 . . 0 28 hm5C_associated_SNPs_5102 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33441150 33441150 1 + A G rs75248757 33441154 + 33441134 33441174 41 TTGGCTCCTCTCCTCTAGGCCGTCGCTTTCGGGTTCTCTCA TTGGCTCCTCTCCTCTGGGCCGTCGCTTTCGGGTTCTCTCA < 41bp 1 0.285347245346519 1 0.0812703669071198 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TARS ENSG00000113407 splicing Human protein_coding chr5:33441154 chr5:33441150 . . 0 17 hm5C_associated_SNPs_5103 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33441155 33441155 1 + G A rs115792337 33441138 + 33441118 33441158 41 ACCTCCCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCG ACCTCCCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCATCG < 41bp 1 0.524161721122367 1 0.0725327730178833 experiment 0.951676557755266 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 UTR5 Human protein_coding chr5:33441138 chr5:33441155 . . 0 38 hm5C_associated_SNPs_5104 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33441155 33441155 1 + G A rs115792337 33441143 + 33441123 33441163 41 CCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCGTCGCTTTC CCACCCGCCTCTTGGCTCCTCTCCTCTAGGCCATCGCTTTC < 41bp 1 0.522753063364086 1 0.196986019611359 experiment 0.954493873271828 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 UTR5 Human protein_coding chr5:33441143 chr5:33441155 . . 0 33 hm5C_associated_SNPs_5105 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33441155 33441155 1 + G A rs115792337 33441154 + 33441134 33441174 41 TTGGCTCCTCTCCTCTAGGCCGTCGCTTTCGGGTTCTCTCA TTGGCTCCTCTCCTCTAGGCCATCGCTTTCGGGTTCTCTCA < 41bp 1 0.268921790886614 1 0.0393438041210175 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TARS ENSG00000113407 UTR5 Human protein_coding chr5:33441154 chr5:33441155 . . 0 22 hm5C_associated_SNPs_5106 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33441148-33441177
64251 chr5 33461355 33461355 1 + G A rs2270905 33461353 + 33461333 33461373 41 AACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGAT AACTAAACCTTTCTACTCGCCCAGAAAAATTCCTTGGAGAT < 41bp 1 0.306937242792471 1 0.11626124382019 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33461353 chr5:33461355 synonymous SNV . 0 23 hm5C_associated_SNPs_5107 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:33461321-33461356
64251 chr5 34831038 34831038 1 + G A rs151279959 34831032 + 34831012 34831052 41 GGACTTCTCCCAGGAGAAGACTGCCCGCCTCAGAACTGCTT GGACTTCTCCCAGGAGAAGACTGCCCACCTCAGAACTGCTT < 41bp 1 0.346967903061957 1 0.245652616024017 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RAI14 ENSG00000039560 UTR3 Human protein_coding chr5:34831032 chr5:34831038 . . 0 27 hm5C_associated_SNPs_5109 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34831035-34831054
64251 chr5 34831040 34831040 1 + C T rs140599244 34831032 + 34831012 34831052 41 GGACTTCTCCCAGGAGAAGACTGCCCGCCTCAGAACTGCTT GGACTTCTCCCAGGAGAAGACTGCCCGCTTCAGAACTGCTT < 41bp 1 0.332727249402628 1 0.211628377437592 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RAI14 ENSG00000039560 UTR3 Human protein_coding chr5:34831032 chr5:34831040 . . 0 29 hm5C_associated_SNPs_5110 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34831035-34831054
64251 chr5 34929719 34929719 1 + T C rs564251427 34929704 + 34929684 34929724 41 GCACCGCCCCCGCCGCGCTCCCGCTTGCCGCAGCCTGCGTC GCACCGCCCCCGCCGCGCTCCCGCTTGCCGCAGCCCGCGTC < 41bp 1 0.516784486231396 1 0.128358870744705 experiment 0.966431027537208 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC21 ENSG00000168724 UTR5 Human protein_coding chr5:34929704 chr5:34929719 . . 0 36 hm5C_associated_SNPs_5111 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr5:34929716-34929738
64251 chr5 34929719 34929719 1 + T C rs564251427 34929705 + 34929685 34929725 41 CACCGCCCCCGCCGCGCTCCCGCTTGCCGCAGCCTGCGTCG CACCGCCCCCGCCGCGCTCCCGCTTGCCGCAGCCCGCGTCG < 41bp 1 0.691198163843332 1 0.103690624237061 experiment 0.617603672313337 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC21 ENSG00000168724 UTR5 Human protein_coding chr5:34929705 chr5:34929719 . . 0 35 hm5C_associated_SNPs_5112 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr5:34929716-34929738
64251 chr5 34929719 34929719 1 + T C rs564251427 34929730 + 34929710 34929750 41 GCCGCAGCCTGCGTCGTCTGCCGCCACCGCGCGCCTTCACT GCCGCAGCCCGCGTCGTCTGCCGCCACCGCGCGCCTTCACT < 41bp 1 0.360996737509573 1 0.390122532844543 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC21 ENSG00000168724 UTR5 Human protein_coding chr5:34929730 chr5:34929719 . . 0 10 hm5C_associated_SNPs_5113 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr5:34929716-34929738
64251 chr5 36183431 36183431 1 + C T rs187484 36183440 + 36183420 36183460 41 GTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCC GTGCAGTGGTGTGATCTCGGCTCACTGCAAGCTCCGCCTCC < 41bp 1 0.669129517327433 1 0.0954729616641998 experiment 0.661740965345133 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SKP2 ENSG00000145604 UTR3 Human protein_coding chr5:36183440 chr5:36183431 . . 0 12 hm5C_associated_SNPs_5115 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:36183399-36183431
64251 chr5 36183431 36183431 1 + C T rs187484 36183442 + 36183422 36183462 41 GCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCA GCAGTGGTGTGATCTCGGCTCACTGCAAGCTCCGCCTCCCA < 41bp 1 0.701269536692672 1 0.133760958909988 experiment 0.597460926614656 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SKP2 ENSG00000145604 UTR3 Human protein_coding chr5:36183442 chr5:36183431 . . 0 10 hm5C_associated_SNPs_5116 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:36183399-36183431
64251 chr5 36986009 36986009 1 + T C rs148394805 36986004 + 36985984 36986024 41 ATAAATCAAGATCTGATAAACTTGGTTTTAAATCACCAACT ATAAATCAAGATCTGATAAACTTGGCTTTAAATCACCAACT < 41bp 1 0.261857800817322 1 0.157854080200195 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36986004 chr5:36986009 synonymous SNV . 0 26 hm5C_associated_SNPs_5119 1 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr5:36985998-36986014
64251 chr5 38846172 38846172 1 + C G rs565811520 38846188 + 38846168 38846208 41 CACCCGCGCCCCACGCGCCGCCGAGGACTCGGCCCGGCTCG CACCGGCGCCCCACGCGCCGCCGAGGACTCGGCCCGGCTCG < 41bp 1 0.597488568247866 1 0.746447443962097 experiment 0.805022863504269 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OSMR ENSG00000145623 UTR5 Human protein_coding chr5:38846188 chr5:38846172 . . 0 5 hm5C_associated_SNPs_5120 0 0 3 DDX3X POSTAR2 ENCODE chr5:38846141-38846257
64251 chr5 38846184 38846184 1 + G A rs533781365 38846188 + 38846168 38846208 41 CACCCGCGCCCCACGCGCCGCCGAGGACTCGGCCCGGCTCG CACCCGCGCCCCACGCACCGCCGAGGACTCGGCCCGGCTCG < 41bp 1 0.613587412320037 1 0.8264040350914 experiment 0.772825175359926 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OSMR ENSG00000145623 UTR5 Human protein_coding chr5:38846188 chr5:38846184 . . 0 17 hm5C_associated_SNPs_5121 0 0 3 DDX3X POSTAR2 ENCODE chr5:38846141-38846257
64251 chr5 38935236 38935236 1 + C T rs558853565 38935216 + 38935196 38935236 41 CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTAGCC CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTAGCT < 41bp 1 0.66129132527004 1 0.558277904987335 experiment 0.67741734945992 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSMR ENSG00000145623 UTR3 Human protein_coding chr5:38935216 chr5:38935236 . . 0 41 hm5C_associated_SNPs_5127 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:38935229-38935253
64251 chr5 43124142 43124142 1 + C A rs548999727 43124158 + 43124138 43124178 41 ATTGCTTGAGCCCAGGAGTTCGAGGCCAGCCTGGGGCAACA ATTGATTGAGCCCAGGAGTTCGAGGCCAGCCTGGGGCAACA < 41bp 1 0.776688408451261 1 0.869040846824646 experiment 0.446623183097478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF131 ENSG00000172262 intronic Human protein_coding chr5:43124158 chr5:43124142 . . 0 5 hm5C_associated_SNPs_5128 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr5:43124142-43124143
64251 chr5 43124176 43124176 1 + A G rs79417428 43124158 + 43124138 43124178 41 ATTGCTTGAGCCCAGGAGTTCGAGGCCAGCCTGGGGCAACA ATTGCTTGAGCCCAGGAGTTCGAGGCCAGCCTGGGGCAGCA < 41bp 1 0.79087495316351 1 0.882238149642944 experiment 0.418250093672981 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF131 ENSG00000172262 intronic Human protein_coding chr5:43124158 chr5:43124176 . . 0 39 hm5C_associated_SNPs_5129 0 0 2 HNRNPM POSTAR2 ENCODE chr5:43124145-43124186
64251 chr5 43613046 43613046 1 + A G rs35201656 43613043 + 43613023 43613063 41 GCAACTGACTGTTGGAGTCCCCAAAGAGATATTCCAAAATG GCAACTGACTGTTGGAGTCCCCAGAGAGATATTCCAAAATG < 41bp 1 0.627108854649074 1 0.419277369976044 experiment 0.745782290701853 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43613043 chr5:43613046 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_5130 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:43613016-43613053
64251 chr5 52095943 52095943 1 + G A rs114309882 52095954 + 52095934 52095974 41 CGTCAGCCCGCTGTTGCGTGCTGCCAGCGGGAACTGTGTAG CGTCAGCCCACTGTTGCGTGCTGCCAGCGGGAACTGTGTAG < 41bp 1 0.418420852631541 1 0.0422749519348145 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PELO ENSG00000152684 UTR5 Human protein_coding chr5:52095954 chr5:52095943 . . 0 10 hm5C_associated_SNPs_5132 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:52095940-52095960
64251 chr5 52095944 52095944 1 + C T rs149631974 52095954 + 52095934 52095974 41 CGTCAGCCCGCTGTTGCGTGCTGCCAGCGGGAACTGTGTAG CGTCAGCCCGTTGTTGCGTGCTGCCAGCGGGAACTGTGTAG < 41bp 1 0.431338391041686 1 0.0757882595062256 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PELO ENSG00000152684 UTR5 Human protein_coding chr5:52095954 chr5:52095944 . . 0 11 hm5C_associated_SNPs_5133 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:52095940-52095960
64251 chr5 53840387 53840387 1 + A T rs548785903 53840379 + 53840359 53840399 41 GGATTGATCTAAGGAGGGACCAGAAATAATTTTTGCTATTC GGATTGATCTAAGGAGGGACCAGAAATATTTTTTGCTATTC < 41bp 1 0.444787536661985 1 0.567467093467712 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX18 ENSG00000178996 UTR3 Human protein_coding chr5:53840379 chr5:53840387 . . 0 29 hm5C_associated_SNPs_5134 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr5:53840364-53840411
64251 chr5 54456071 54456071 1 + G A rs148475851 54456062 + 54456042 54456082 41 CCGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT CCGCTAAAATGTTCCGGGCCCAGAGCAAAAGTATTTGCAGT < 41bp 1 0.492823007664149 1 0.472694456577301 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456062 chr5:54456071 synonymous SNV . 0 30 hm5C_associated_SNPs_5135 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:54456021-54456092
64251 chr5 54720591 54720591 1 + C T rs200078537 54720581 + 54720561 54720601 41 CAAGAGAGATATTGTGTTTGCTGCCAGCCTCTACTTGTAGA CAAGAGAGATATTGTGTTTGCTGCCAGCCTTTACTTGTAGA < 41bp 1 0.239785818124181 1 0.107453435659409 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54720581 chr5:54720591 synonymous SNV . 0 31 hm5C_associated_SNPs_5136 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54720559-54720621
64251 chr5 54720799 54720799 1 + A G rs184652225 54720809 + 54720789 54720829 41 AAATGTATACAGGTGGGGCACTGTTTTGGTGGAAGGCTTGG AAATGTATACGGGTGGGGCACTGTTTTGGTGGAAGGCTTGG < 41bp 1 0.285331597216928 1 0.0935280919075012 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLPP1;SKIV2L2 ENSG00000039123;ENSG00000067113 UTR3 Human other chr5:54720809 chr5:54720799 . . 0 11 hm5C_associated_SNPs_5137 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:54720769-54720800
64251 chr5 56526778 56526778 1 + A G rs62000370 56526784 + 56526764 56526804 41 GCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAAAATT GCTTTGATTCTGCTGTTGGGCGTCCTAATGGAGGTAAAATT < 41bp 1 0.203831800443074 1 0.195968627929688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526784 chr5:56526778 nonsynonymous SNV 1.000 0 15 hm5C_associated_SNPs_5141 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:56526746-56526778
64251 chr5 56526783 56526783 1 + G A rs1130203 56526784 + 56526764 56526804 41 GCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAAAATT GCTTTGATTCTGCTATTGGACGTCCTAATGGAGGTAAAATT < 41bp 1 0.221810074324999 1 0.0756416320800781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526784 chr5:56526783 synonymous SNV . 0 20 hm5C_associated_SNPs_5142 0 0 1 GRWD1 POSTAR2 ENCODE chr5:56526751-56526799
64251 chr5 64267561 64267561 1 + C G rs58322956 64267545 + 64267525 64267565 41 TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCCGAAT TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCGGAAT < 41bp 1 0.243534114746419 1 0.675778567790985 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64267545 chr5:64267561 synonymous SNV . 0 37 hm5C_associated_SNPs_5143 0 0 2 GRWD1 POSTAR2 ENCODE chr5:64267538-64267634
64251 chr5 64859128 64859128 1 + T G rs116792697 64859145 + 64859125 64859165 41 CGATGCGAACAACATGGCGGCGGAAAGTGGTAGCGATTTTC CGAGGCGAACAACATGGCGGCGGAAAGTGGTAGCGATTTTC < 41bp 1 0.622079073574933 1 0.46110987663269 experiment 0.755841852850133 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPWD1 ENSG00000113593 UTR5 Human protein_coding chr5:64859145 chr5:64859128 . . 0 4 hm5C_associated_SNPs_5144 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:64859120-64859140
64251 chr5 65118664 65118664 1 + T C rs149642804 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTCTGGACGGCACGGACATGC < 41bp 1 0.381197430619156 1 0.344294816255569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118664 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_5145 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr5 68505922 68505922 1 + G A rs61743885 68505907 + 68505887 68505927 41 GGCGCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTC GGCGCGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTC < 41bp 1 0.689905381354202 1 0.389481484889984 experiment 0.620189237291595 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505907 chr5:68505922 . . 0 36 hm5C_associated_SNPs_5147 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505910 + 68505890 68505930 41 GCGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAG GCGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAG < 41bp 1 0.243337291918344 1 0.0511916279792786 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505910 chr5:68505922 . . 0 33 hm5C_associated_SNPs_5148 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505911 + 68505891 68505931 41 CGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGC CGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGC < 41bp 1 0.630230508439267 1 0.0825116336345673 experiment 0.739538983121467 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505911 chr5:68505922 . . 0 32 hm5C_associated_SNPs_5149 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505913 + 68505893 68505933 41 ATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAG ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAG < 41bp 1 0.789499581215404 1 0.0800339579582214 experiment 0.421000837569192 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505913 chr5:68505922 . . 0 30 hm5C_associated_SNPs_5150 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505917 + 68505897 68505937 41 CGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAGTTCT CGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAGTTCT < 41bp 1 0.550408151667435 1 0.624884605407715 experiment 0.89918369666513 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505917 chr5:68505922 . . 0 26 hm5C_associated_SNPs_5151 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505919 + 68505899 68505939 41 GCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAGTTCTGC GCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAGTTCTGC < 41bp 1 0.78008231511914 1 0.163033336400986 experiment 0.439835369761721 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505919 chr5:68505922 . . 0 24 hm5C_associated_SNPs_5152 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 68505922 68505922 1 + G A rs61743885 68505920 + 68505900 68505940 41 CTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAGTTCTGCC CTCACTGCAACCTCTGCCTCCCAGGTTCAAGCAGTTCTGCC < 41bp 1 0.692652827377193 1 0.288315713405609 experiment 0.614694345245615 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPH ENSG00000153044 UTR3 Human protein_coding chr5:68505920 chr5:68505922 . . 0 23 hm5C_associated_SNPs_5153 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68505912-68505990
64251 chr5 70895499 70895499 1 + G C rs119103219 70895490 + 70895470 70895510 41 CCTTTCTTCGCTTTAGGTCTCCATTTCTGGAATTATCCCAG CCTTTCTTCGCTTTAGGTCTCCATTTCTGCAATTATCCCAG < 41bp 1 0.0510431813746386 1 0.135745525360107 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70895490 chr5:70895499 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_5161 2 0 1 UCHL5 POSTAR2 ENCODE chr5:70895484-70895573
64251 chr5 71403301 71403301 1 + C G rs141626917 71403316 + 71403296 71403336 41 CCTGCCGCAGTGGAGAGGAGCGGCCGGAGCGAGACACTTCG CCTGCGGCAGTGGAGAGGAGCGGCCGGAGCGAGACACTTCG < 41bp 1 0.573078258362686 1 0.608824670314789 experiment 0.853843483274629 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP1B ENSG00000131711 UTR5 Human protein_coding chr5:71403316 chr5:71403301 . . 0 6 hm5C_associated_SNPs_5162 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:71403280-71403320
64251 chr5 71403306 71403306 1 + T A rs3112402 71403316 + 71403296 71403336 41 CCTGCCGCAGTGGAGAGGAGCGGCCGGAGCGAGACACTTCG CCTGCCGCAGAGGAGAGGAGCGGCCGGAGCGAGACACTTCG < 41bp 1 0.572173029177363 1 0.4260493516922 experiment 0.855653941645274 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP1B ENSG00000131711 UTR5 Human protein_coding chr5:71403316 chr5:71403306 . . 0 11 hm5C_associated_SNPs_5163 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:71403280-71403320
64251 chr5 71495189 71495189 1 + G A rs144122529 71495192 + 71495172 71495212 41 GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAACC GTGGCCACACACTTGGGAACCCCAGCTACTCTTATGAAACC < 41bp 1 0.135507586727896 1 0.213478803634644 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495192 chr5:71495189 nonsynonymous SNV 0.952 1 18 hm5C_associated_SNPs_5164 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71495175-71495195
64251 chr5 72185751 72185751 1 + A G rs191625222 72185767 + 72185747 72185787 41 CATTAGCAGATTCAGTAGGACATCATTTAAACAAACCAGTA CATTGGCAGATTCAGTAGGACATCATTTAAACAAACCAGTA < 41bp 1 0.347950607136529 1 0.0755118429660797 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185767 chr5:72185751 synonymous SNV . 0 5 hm5C_associated_SNPs_5165 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185700-72185760
64251 chr5 72185751 72185751 1 + A G rs191625222 72185770 + 72185750 72185790 41 TAGCAGATTCAGTAGGACATCATTTAAACAAACCAGTAAGT TGGCAGATTCAGTAGGACATCATTTAAACAAACCAGTAAGT < 41bp 1 0.0786017408224868 1 0.0588712990283966 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185770 chr5:72185751 synonymous SNV . 0 2 hm5C_associated_SNPs_5166 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185700-72185760
64251 chr5 72209462 72209462 1 + G T rs76192135 72209463 + 72209443 72209483 41 AGAATTTCCTTATACTGTGGCTTGGTATTATTCAAGATTAG AGAATTTCCTTATACTGTGTCTTGGTATTATTCAAGATTAG < 41bp 1 0.180596103358816 1 0.109380155801773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNPO1 ENSG00000083312 UTR3 Human protein_coding chr5:72209463 chr5:72209462 . . 0 20 hm5C_associated_SNPs_5167 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:72209430-72209476
64251 chr5 72798845 72798845 1 + A G rs14010 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CATTACAGGCCATGCTGAGACGAAGCAGCTGACAGAAATGC < 41bp 1 0.657944943447637 1 0.480662435293198 experiment 0.684110113104726 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798845 synonymous SNV . 0 22 hm5C_associated_SNPs_5168 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr5 72801092 72801092 1 + G A rs545142219 72801109 + 72801089 72801129 41 CCTGAAGAAGTTACTGGGAGCTGCTATTTTATATTATGACT CCTAAAGAAGTTACTGGGAGCTGCTATTTTATATTATGACT < 41bp 1 0.298476996551596 1 0.283280283212662 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BTF3 ENSG00000145741 UTR3 Human protein_coding chr5:72801109 chr5:72801092 . . 0 4 hm5C_associated_SNPs_5169 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:72801069-72801098
64251 chr5 73981361 73981361 1 + C A rs140509633 73981351 + 73981331 73981371 41 CCCCAATTCCACGGCGGGCCCCTCCTGCACCCTGCTGGAGG CCCCAATTCCACGGCGGGCCCCTCCTGCACACTGCTGGAGG < 41bp 1 0.0712033946713192 1 0.0759294033050537 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981351 chr5:73981361 synonymous SNV . 0 31 hm5C_associated_SNPs_5170 0 0 4 IGF2BP2 POSTAR2 ENCODE chr5:73981327-73981384
64251 chr5 77775593 77775593 1 + T C rs145040032 77775613 + 77775593 77775633 41 TGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA CGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA < 41bp 1 0.592473673399529 1 0.374295383691788 experiment 0.815052653200942 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SCAMP1 ENSG00000085365 UTR3 Human protein_coding chr5:77775613 chr5:77775593 . . 0 1 hm5C_associated_SNPs_5171 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:77775572-77775601
64251 chr5 77775594 77775594 1 + G A rs185956142 77775613 + 77775593 77775633 41 TGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA TAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA < 41bp 1 0.563338608285705 1 0.272289931774139 experiment 0.87332278342859 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SCAMP1 ENSG00000085365 UTR3 Human protein_coding chr5:77775613 chr5:77775594 . . 0 2 hm5C_associated_SNPs_5172 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:77775572-77775601
64251 chr5 77775594 77775594 1 + G A rs185956142 77775614 + 77775594 77775634 41 GGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAG AGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAG < 41bp 1 0.410449329560387 1 0.254628598690033 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SCAMP1 ENSG00000085365 UTR3 Human protein_coding chr5:77775614 chr5:77775594 . . 0 1 hm5C_associated_SNPs_5173 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:77775572-77775601
64251 chr5 78908580 78908580 1 + C T rs147237003 78908591 + 78908571 78908611 41 TAGCCCTTCCCGGAGGACACCTGTGAGTTTAGGGGGTTTCG TAGCCCTTCTCGGAGGACACCTGTGAGTTTAGGGGGTTTCG < 41bp 1 0.431102548746995 1 0.165830165147781 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD4 ENSG00000164329 UTR5 Human protein_coding chr5:78908591 chr5:78908580 . . 0 10 hm5C_associated_SNPs_5176 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:78908501-78908657
64251 chr5 82833368 82833368 1 + A G rs144610900 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAACAGCCGAAAAAGGGGCAGAATCAGT < 41bp 1 0.208841563959908 1 0.428435921669006 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833368 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_5190 3 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr5 82833369 82833369 1 + A G rs309559 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAACAGCCAGAAAAGGGGCAGAATCAGT < 41bp 1 0.260914036605739 1 0.467070788145065 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833369 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_5191 3 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr5 82834299 82834299 1 + G A rs188703 82834308 + 82834288 82834328 41 CACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG CACTCTCCCACATAGTCCTGCCTCTGTCTTTATGGAGCAGG < 41bp 1 0.0147565593740475 1 0.0602878332138062 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834308 chr5:82834299 nonsynonymous SNV 0.008 1 12 hm5C_associated_SNPs_5192 3 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:82834265-82834311
64251 chr5 85915288 85915288 1 + G A rs142386563 85915269 + 85915249 85915289 41 CCTTCCTTGTAGTAAGACACCAACTGCTTAAAACATAAGGA CCTTCCTTGTAGTAAGACACCAACTGCTTAAAACATAAGAA < 41bp 1 0.402954413544251 1 0.375348269939423 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COX7C ENSG00000127184 UTR3 Human protein_coding chr5:85915269 chr5:85915288 . . 0 40 hm5C_associated_SNPs_5193 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:85915221-85915306
64251 chr5 92929684 92929684 1 + C A rs577570045 92929693 + 92929673 92929713 41 GAGGGCCGAGACAGGAGCAGCCCACCCAGCAGAAATACAAT GAGGGCCGAGAAAGGAGCAGCCCACCCAGCAGAAATACAAT < 41bp 1 0.0726683200361004 1 0.190984904766083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR2F1 ENSG00000175745 UTR3 Human protein_coding chr5:92929693 chr5:92929684 . . 0 12 hm5C_associated_SNPs_5194 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:92929684-92929685
64251 chr5 92929684 92929684 1 + C A rs577570045 92929694 + 92929674 92929714 41 AGGGCCGAGACAGGAGCAGCCCACCCAGCAGAAATACAATC AGGGCCGAGAAAGGAGCAGCCCACCCAGCAGAAATACAATC < 41bp 1 0.15048815630797 1 0.0489188432693481 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR2F1 ENSG00000175745 UTR3 Human protein_coding chr5:92929694 chr5:92929684 . . 0 11 hm5C_associated_SNPs_5195 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:92929684-92929685
64251 chr5 92929684 92929684 1 + C A rs577570045 92929695 + 92929675 92929715 41 GGGCCGAGACAGGAGCAGCCCACCCAGCAGAAATACAATCC GGGCCGAGAAAGGAGCAGCCCACCCAGCAGAAATACAATCC < 41bp 1 0.476261843149686 1 0.158089101314545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR2F1 ENSG00000175745 UTR3 Human protein_coding chr5:92929695 chr5:92929684 . . 0 10 hm5C_associated_SNPs_5196 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:92929684-92929685
64251 chr5 92929684 92929684 1 + C A rs577570045 92929697 + 92929677 92929717 41 GCCGAGACAGGAGCAGCCCACCCAGCAGAAATACAATCCGA GCCGAGAAAGGAGCAGCCCACCCAGCAGAAATACAATCCGA < 41bp 1 0.570241660424515 1 0.681437134742737 experiment 0.859516679150969 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR2F1 ENSG00000175745 UTR3 Human protein_coding chr5:92929697 chr5:92929684 . . 0 8 hm5C_associated_SNPs_5197 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:92929684-92929685
64251 chr5 92929684 92929684 1 + C A rs577570045 92929698 + 92929678 92929718 41 CCGAGACAGGAGCAGCCCACCCAGCAGAAATACAATCCGAG CCGAGAAAGGAGCAGCCCACCCAGCAGAAATACAATCCGAG < 41bp 1 0.34406577576669 1 0.604243040084839 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NR2F1 ENSG00000175745 UTR3 Human protein_coding chr5:92929698 chr5:92929684 . . 0 7 hm5C_associated_SNPs_5198 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:92929684-92929685
64251 chr5 94031085 94031085 1 + C G rs187730482 94031082 + 94031062 94031102 41 GCATTGGTACTTACTGTGGACTTCATAGCTTACTGACAGAT GCATTGGTACTTACTGTGGACTTGATAGCTTACTGACAGAT < 41bp 1 0.492768416901607 1 0.172425389289856 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF1 ENSG00000133302 UTR3 Human protein_coding chr5:94031082 chr5:94031085 . . 0 24 hm5C_associated_SNPs_5199 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:94031058-94031097
64251 chr5 95067362 95067362 1 + C T rs138352241 95067344 + 95067324 95067364 41 CCCCGCGAAGCCGTGAGCCGCTGCTTTTCTCCGAGTCGCCG CCCCGCGAAGCCGTGAGCCGCTGCTTTTCTCCGAGTCGTCG < 41bp 1 0.539645957261378 1 0.0522703230381012 experiment 0.920708085477244 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RHOBTB3 ENSG00000250240 ncRNA_intronic Human antisense chr5:95067344 chr5:95067362 . . 0 39 hm5C_associated_SNPs_5200 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr5:95067346-95067369
64251 chr5 95131401 95131401 1 + A G rs7622 95131395 + 95131375 95131415 41 GAGCTAGTCAGAAGAGAAATCAAATTAGTGTTTAAACCCAT GAGCTAGTCAGAAGAGAAATCAAATTGGTGTTTAAACCCAT < 41bp 1 0.578419087068093 1 0.784567356109619 experiment 0.843161825863814 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOBTB3 ENSG00000164292 UTR3 Human protein_coding chr5:95131395 chr5:95131401 . . 0 27 hm5C_associated_SNPs_5201 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr5:95131390-95131411
64251 chr5 95131605 95131605 1 + G T rs565568591 95131592 + 95131572 95131612 41 GCTTCCATATATTTCCCAGTCATTTTAATTAGAGAAGATAC GCTTCCATATATTTCCCAGTCATTTTAATTAGATAAGATAC < 41bp 1 0.162979388893247 1 0.0850409865379333 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RHOBTB3 ENSG00000164292 UTR3 Human protein_coding chr5:95131592 chr5:95131605 . . 0 34 hm5C_associated_SNPs_5202 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr5:95131462-95131610
64251 chr5 95131609 95131609 1 + A C rs200908250 95131592 + 95131572 95131612 41 GCTTCCATATATTTCCCAGTCATTTTAATTAGAGAAGATAC GCTTCCATATATTTCCCAGTCATTTTAATTAGAGAAGCTAC < 41bp 1 0.175896443894187 1 0.066005527973175 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RHOBTB3 ENSG00000164292 UTR3 Human protein_coding chr5:95131592 chr5:95131609 . . 0 38 hm5C_associated_SNPs_5203 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr5:95131462-95131610
64251 chr5 95131859 95131859 1 + T C rs143291303 95131854 + 95131834 95131874 41 ACAGCTAAACTTTTCAACTGCAATTTTAAAAACTACACTAC ACAGCTAAACTTTTCAACTGCAATTCTAAAAACTACACTAC < 41bp 1 0.233786187456821 1 0.0688180029392242 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOBTB3 ENSG00000164292 UTR3 Human protein_coding chr5:95131854 chr5:95131859 . . 0 26 hm5C_associated_SNPs_5204 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714641 chr5:95131837-95131873
64251 chr5 96038519 96038519 1 + G A rs557142984 96038516 + 96038496 96038536 41 GCCCCGTCGCACTCAGAGAGCTGGGCTGGAGCTCCAAGCGG GCCCCGTCGCACTCAGAGAGCTGAGCTGGAGCTCCAAGCGG < 41bp 1 0.719528422793954 1 0.154726684093475 experiment 0.560943154412091 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAST ENSG00000153113 UTR5 Human protein_coding chr5:96038516 chr5:96038519 . . 0 24 hm5C_associated_SNPs_5206 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr5:96038513-96038536
64251 chr5 96063212 96063212 1 + A G rs113125742 96063227 + 96063207 96063247 41 ACCTGAGAAGAAGTCACAGTCAACCAAGGTAAATAGTTTAA ACCTGGGAAGAAGTCACAGTCAACCAAGGTAAATAGTTTAA < 41bp 1 0.304946605782635 1 0.262213110923767 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAST ENSG00000153113 CDS Human protein_coding chr5:96063227 chr5:96063212 nonsynonymous SNV 0.992 4 6 hm5C_associated_SNPs_5207 0 0 5 U2AF2 POSTAR2 ENCODE chr5:96063145-96063232
64251 chr5 96109733 96109733 1 + A G rs181855866 96109719 + 96109699 96109739 41 TATGGGATTTTACACACCACCAGCTTAAAATGCTATGTCTC TATGGGATTTTACACACCACCAGCTTAAAATGCTGTGTCTC < 41bp 1 0.399922138486188 1 0.688593804836273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAST ENSG00000153113 UTR3 Human protein_coding chr5:96109719 chr5:96109733 . . 0 35 hm5C_associated_SNPs_5208 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:96109704-96109749
64251 chr5 102472497 102472497 1 + C T rs114517746 102472507 + 102472487 102472527 41 TAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGG TAATCAATGATTTGAATATGCAGTATCTCATACAAGATAGG < 41bp 1 0.380241225564404 1 0.170014649629593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102472507 chr5:102472497 synonymous SNV . 0 11 hm5C_associated_SNPs_5214 0 0 1 ZNF622 POSTAR2 ENCODE chr5:102472471-102472526
64251 chr5 111496562 111496562 1 + C G rs35445142 111496579 + 111496559 111496599 41 GTCCTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGC GTCGTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGC < 41bp 1 0.329359520743428 1 0.311429679393768 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496579 chr5:111496562 . . 0 4 hm5C_associated_SNPs_5215 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:111496560-111496580
64251 chr5 111496576 111496576 1 + G A rs374211009 111496579 + 111496559 111496599 41 GTCCTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGC GTCCTTTCTTCCTTTTGATGCGAGCTTGCTGTGGTTTTTGC < 41bp 1 0.397997467533361 1 0.352875530719757 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496579 chr5:111496576 . . 0 18 hm5C_associated_SNPs_5216 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:111496560-111496580
64251 chr5 111496581 111496581 1 + A G rs190479616 111496579 + 111496559 111496599 41 GTCCTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGC GTCCTTTCTTCCTTTTGGTGCGGGCTTGCTGTGGTTTTTGC < 41bp 1 0.481156965768151 1 0.586247086524963 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496579 chr5:111496581 . . 0 23 hm5C_associated_SNPs_5217 0 0 13 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:111496560-111496600
64251 chr5 111496598 111496598 1 + G T rs17134162 111496579 + 111496559 111496599 41 GTCCTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGC GTCCTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTTC < 41bp 1 0.32659581645038 1 0.371701419353485 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496579 chr5:111496598 . . 0 40 hm5C_associated_SNPs_5218 0 0 20 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:111496560-111496600
64251 chr5 111496834 111496834 1 + C G rs146721641 111496832 + 111496812 111496852 41 ATCGACTATGCCAGGGAGTTCTCCAGATAAGCCTGGTTTTA ATCGACTATGCCAGGGAGTTCTGCAGATAAGCCTGGTTTTA < 41bp 1 0.694614317738808 1 0.403013825416565 experiment 0.610771364522383 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496832 chr5:111496834 . . 0 23 hm5C_associated_SNPs_5219 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:111496653-111496910
64251 chr5 111497307 111497307 1 + T G rs17266115 111497298 + 111497278 111497318 41 TGATACCTTTGGTGTAGGAGCTGCATAAGTAACAGTTGCTG TGATACCTTTGGTGTAGGAGCTGCATAAGGAACAGTTGCTG < 41bp 1 0.647756922800694 1 0.547471821308136 experiment 0.704486154398612 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA13 ENSG00000238363 ncRNA_exonic Human snoRNA chr5:111497298 chr5:111497307 . . 0 30 hm5C_associated_SNPs_5220 0 0 31 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:111497272-111497313
64251 chr5 111497307 111497307 1 + T G rs17266115 111497310 + 111497290 111497330 41 TGTAGGAGCTGCATAAGTAACAGTTGCTGCTTTTACGTTTC TGTAGGAGCTGCATAAGGAACAGTTGCTGCTTTTACGTTTC < 41bp 1 0.360858822412553 1 0.150012135505676 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA13 ENSG00000238363 ncRNA_exonic Human snoRNA chr5:111497310 chr5:111497307 . . 0 18 hm5C_associated_SNPs_5221 0 0 31 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:111497272-111497313
64251 chr5 112164557 112164557 1 + T C rs144056494 112164560 + 112164540 112164580 41 GATTAATTTGCAGGTTATTGCGAGTGTTTTGAGGAATTTGT GATTAATTTGCAGGTTACTGCGAGTGTTTTGAGGAATTTGT < 41bp 1 0.117394149730026 1 0.382902562618256 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APC ENSG00000134982;ENSG00000258864 CDS Human other chr5:112164560 chr5:112164557 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_5222 4 0 1 PUM2 POSTAR2 ENCODE chr5:112164554-112164642
64251 chr5 112164561 112164561 1 + G A rs351771 112164560 + 112164540 112164580 41 GATTAATTTGCAGGTTATTGCGAGTGTTTTGAGGAATTTGT GATTAATTTGCAGGTTATTGCAAGTGTTTTGAGGAATTTGT < 41bp 1 0.141185035120322 1 0.311737298965454 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APC ENSG00000134982;ENSG00000258864 CDS Human other chr5:112164560 chr5:112164561 synonymous SNV . 0 22 hm5C_associated_SNPs_5223 5 0 1 PUM2 POSTAR2 ENCODE chr5:112164554-112164642
64251 chr5 112197046 112197046 1 + C T rs73220042 112197065 + 112197045 112197085 41 GCTCCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCT GTTCCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCT < 41bp 1 0.615989220733252 1 0.210376560688019 experiment 0.768021558533497 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRP19 ENSG00000153037;ENSG00000272869 UTR5 Human other chr5:112197065 chr5:112197046 . . 0 2 hm5C_associated_SNPs_5224 0 0 31 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:112197014-112197047
64251 chr5 112197048 112197048 1 + C G rs141113736 112197065 + 112197045 112197085 41 GCTCCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCT GCTGCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCT < 41bp 1 0.639414481977335 1 0.195974886417389 experiment 0.721171036045331 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRP19 ENSG00000153037;ENSG00000272869 UTR5 Human other chr5:112197065 chr5:112197048 . . 0 4 hm5C_associated_SNPs_5225 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:112197020-112197060
64251 chr5 112350157 112350157 1 + C T rs182956481 112350173 + 112350153 112350193 41 TAAGCCCCTGGATGATGGAGCGAGAAGGGAAGGGGTATGCA TAAGTCCCTGGATGATGGAGCGAGAAGGGAAGGGGTATGCA < 41bp 1 0.691896668668913 1 0.490441679954529 experiment 0.616206662662174 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCP2 ENSG00000172795 UTR3 Human protein_coding chr5:112350173 chr5:112350157 . . 0 5 hm5C_associated_SNPs_5226 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112349929-112350169
64251 chr5 112350159 112350159 1 + C A rs142046152 112350173 + 112350153 112350193 41 TAAGCCCCTGGATGATGGAGCGAGAAGGGAAGGGGTATGCA TAAGCCACTGGATGATGGAGCGAGAAGGGAAGGGGTATGCA < 41bp 1 0.759843072320895 1 0.582317709922791 experiment 0.48031385535821 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCP2 ENSG00000172795 UTR3 Human protein_coding chr5:112350173 chr5:112350159 . . 0 7 hm5C_associated_SNPs_5227 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112349929-112350169
64251 chr5 112350649 112350649 1 + T C rs187595801 112350646 + 112350626 112350666 41 AAGGAATTCACTTGGTAGTACTTTGCTTTAGCTTTTAAATG AAGGAATTCACTTGGTAGTACTTCGCTTTAGCTTTTAAATG < 41bp 1 0.0592489400935293 1 0.0746262669563293 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DCP2 ENSG00000172795 UTR3 Human protein_coding chr5:112350646 chr5:112350649 . . 0 24 hm5C_associated_SNPs_5228 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112350258-112350699
64251 chr5 112868684 112868684 1 + G A rs115673426 112868670 + 112868650 112868690 41 ATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGA ATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCACAGAGA < 41bp 1 0.785192637321242 1 0.607589066028595 experiment 0.429614725357517 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868670 chr5:112868684 nonsynonymous SNV 0.998 1 35 hm5C_associated_SNPs_5229 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868684 112868684 1 + G A rs115673426 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTGAAAGAGTTGCCACAGAGAGACGGGAAAGGA < 41bp 1 0.39878742590187 1 0.0776061415672302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868684 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_5230 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868684 112868684 1 + G A rs115673426 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTGAAAGAGTTGCCACAGAGAGACGGGAAAGGAT < 41bp 1 0.584437506971849 1 0.70954293012619 experiment 0.831124986056302 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868684 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_5231 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868693 112868693 1 + C A rs6594732 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGAAGGGAAAGGA < 41bp 1 0.544443234611359 1 0.119975000619888 experiment 0.911113530777282 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868693 synonymous SNV . 0 32 hm5C_associated_SNPs_5232 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868693 112868693 1 + C A rs6594732 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTGAAAGAGTTGCCGCAGAGAGAAGGGAAAGGAT < 41bp 1 0.6336793617344 1 0.783193707466125 experiment 0.7326412765312 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868693 synonymous SNV . 0 31 hm5C_associated_SNPs_5233 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868694 112868694 1 + G A rs145755313 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACAGGAAAGGA < 41bp 1 0.530866056180708 1 0.109735250473022 experiment 0.938267887638584 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868694 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_5234 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868694 112868694 1 + G A rs145755313 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACAGGAAAGGAT < 41bp 1 0.626749933854346 1 0.738412976264954 experiment 0.746500132291309 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868694 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_5235 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 118729327 118729327 1 + A G rs1045242 118729326 + 118729306 118729346 41 AGATATGTGGTTGGGTAATGCAAATGTAGTTATACAAAGAA AGATATGTGGTTGGGTAATGCGAATGTAGTTATACAAAGAA < 41bp 1 0.644927688937801 1 0.418798506259918 experiment 0.710144622124398 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNFAIP8 ENSG00000145779 UTR3 Human protein_coding chr5:118729326 chr5:118729327 . . 0 22 hm5C_associated_SNPs_5236 0 1 1 FUS POSTAR2 DRA001158,DRS012384 chr5:118729309-118729346
64251 chr5 118729388 118729388 1 + A G rs11064 118729387 + 118729367 118729407 41 CTGAGGACTTTTTAATAGGGCAGTTGTTGTGTTGGTGGCAC CTGAGGACTTTTTAATAGGGCGGTTGTTGTGTTGGTGGCAC < 41bp 1 0.412169123171636 1 0.178697317838669 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNFAIP8 ENSG00000145779 UTR3 Human protein_coding chr5:118729387 chr5:118729388 . . 0 22 hm5C_associated_SNPs_5237 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:118729364-118729389
64251 chr5 118877677 118877677 1 + C T rs12714 118877694 + 118877674 118877714 41 CTACGCCAAGCTCTGAAGGGCACACTACACTATTAATAAAA CTATGCCAAGCTCTGAAGGGCACACTACACTATTAATAAAA < 41bp 1 0.157555485526115 1 0.0969866216182709 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118877694 chr5:118877677 synonymous SNV . 0 4 hm5C_associated_SNPs_5238 3 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118877651-118877684
64251 chr5 118877695 118877695 1 + A G rs111671384 118877694 + 118877674 118877714 41 CTACGCCAAGCTCTGAAGGGCACACTACACTATTAATAAAA CTACGCCAAGCTCTGAAGGGCGCACTACACTATTAATAAAA < 41bp 1 0.195290963577783 1 0.102002441883087 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSD17B4 ENSG00000133835 UTR3 Human protein_coding chr5:118877694 chr5:118877695 . . 0 22 hm5C_associated_SNPs_5239 3 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:118877667-118877705
64251 chr5 126889589 126889589 1 + G A rs147931114 126889593 + 126889573 126889613 41 GGTAAGCCTCCTGCTCGGAACCGTGTGAGTGGGTGAGGAAG GGTAAGCCTCCTGCTCAGAACCGTGTGAGTGGGTGAGGAAG < 41bp 1 0.268170760244579 1 0.086099773645401 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126889593 chr5:126889589 . . 0 17 hm5C_associated_SNPs_5242 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:126889539-126889594
64251 chr5 126889594 126889594 1 + C G rs141708541 126889593 + 126889573 126889613 41 GGTAAGCCTCCTGCTCGGAACCGTGTGAGTGGGTGAGGAAG GGTAAGCCTCCTGCTCGGAACGGTGTGAGTGGGTGAGGAAG < 41bp 1 0.532185876921598 1 0.255441248416901 experiment 0.935628246156803 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126889593 chr5:126889594 . . 0 22 hm5C_associated_SNPs_5243 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:126889539-126889594
64251 chr5 126889595 126889595 1 + G A rs147072598 126889593 + 126889573 126889613 41 GGTAAGCCTCCTGCTCGGAACCGTGTGAGTGGGTGAGGAAG GGTAAGCCTCCTGCTCGGAACCATGTGAGTGGGTGAGGAAG < 41bp 1 0.151122263859671 1 0.0999765396118164 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC1 ENSG00000164244 UTR3 Human protein_coding chr5:126889593 chr5:126889595 . . 0 23 hm5C_associated_SNPs_5244 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr5:126889553-126889637
64251 chr5 130539101 130539101 1 + T C rs17166026 130539083 + 130539063 130539103 41 ATTGAAAATTCTGGAGATGACAGTTTTTCAAAAATCTATTG ATTGAAAATTCTGGAGATGACAGTTTTTCAAAAATCTACTG < 41bp 1 0.687698429757524 1 0.0731565654277802 experiment 0.624603140484952 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LYRM7 ENSG00000186687 UTR3 Human protein_coding chr5:130539083 chr5:130539101 . . 0 39 hm5C_associated_SNPs_5245 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr5:130539085-130539103
64251 chr5 131892962 131892962 1 + C T rs186356727 131892980 + 131892960 131893000 41 CTCAGTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGATT CTTAGTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGATT < 41bp 1 0.477820849367957 1 0.235883444547653 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD50 ENSG00000113522 UTR5 Human protein_coding chr5:131892980 chr5:131892962 . . 0 3 hm5C_associated_SNPs_5247 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:131892960-131892980
64251 chr5 131892979 131892979 1 + G A rs4526098 131892980 + 131892960 131893000 41 CTCAGTTAAGCCTTTGTGGGCTCCAGGTCCCTGGTGAGATT CTCAGTTAAGCCTTTGTGGACTCCAGGTCCCTGGTGAGATT < 41bp 1 0.444183167573925 1 0.1354720890522 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD50 ENSG00000113522 UTR5 Human protein_coding chr5:131892980 chr5:131892979 . . 0 20 hm5C_associated_SNPs_5248 1 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:131892960-131892980
64251 chr5 131940521 131940521 1 + C A rs181961360 131940539 + 131940519 131940559 41 ATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACAT ATAGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACAT < 41bp 1 0.671288005243013 1 0.22568616271019 experiment 0.657423989513974 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131940539 chr5:131940521 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_5249 1 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:131940513-131940542
64251 chr5 131977963 131977963 1 + T C rs1804670 131977975 + 131977955 131977995 41 TCTGAATATGTGGAGAAATTCTACAGGATTAAAAAGAACAT TCTGAATACGTGGAGAAATTCTACAGGATTAAAAAGAACAT < 41bp 1 0.727012584447525 1 0.635460078716278 experiment 0.545974831104951 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131977975 chr5:131977963 synonymous SNV . 0 9 hm5C_associated_SNPs_5250 2 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131977890-131977996
64251 chr5 132203285 132203285 1 + C A rs201494744 132203297 + 132203277 132203317 41 AACGCATCCGGATGACGGTTCCCTGTCTCTGAAAGACCTTT AACGCATCAGGATGACGGTTCCCTGTCTCTGAAAGACCTTT < 41bp 1 0.161402210846784 1 0.0141628980636597 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 UTR3 Human protein_coding chr5:132203297 chr5:132203285 . . 0 9 hm5C_associated_SNPs_5252 0 0 50 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203285 132203285 1 + C A rs201494744 132203298 + 132203278 132203318 41 ACGCATCCGGATGACGGTTCCCTGTCTCTGAAAGACCTTTC ACGCATCAGGATGACGGTTCCCTGTCTCTGAAAGACCTTTC < 41bp 1 0.325780879710225 1 0.0251768827438354 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 UTR3 Human protein_coding chr5:132203298 chr5:132203285 . . 0 8 hm5C_associated_SNPs_5253 0 0 50 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203294 132203294 1 + G A rs200725534 132203297 + 132203277 132203317 41 AACGCATCCGGATGACGGTTCCCTGTCTCTGAAAGACCTTT AACGCATCCGGATGACGATTCCCTGTCTCTGAAAGACCTTT < 41bp 1 0.216594821550295 1 0.0320066213607788 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 UTR3 Human protein_coding chr5:132203297 chr5:132203294 . . 0 18 hm5C_associated_SNPs_5254 0 0 48 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203294 132203294 1 + G A rs200725534 132203298 + 132203278 132203318 41 ACGCATCCGGATGACGGTTCCCTGTCTCTGAAAGACCTTTC ACGCATCCGGATGACGATTCCCTGTCTCTGAAAGACCTTTC < 41bp 1 0.308170983788947 1 0.0240646004676819 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 UTR3 Human protein_coding chr5:132203298 chr5:132203294 . . 0 17 hm5C_associated_SNPs_5255 0 0 48 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 134094463 134094463 1 + C G rs112836736 134094483 + 134094463 134094503 41 CACGTCCTGTTTTCGTTGGCCGCGCTGGGATGGCCGCCACA GACGTCCTGTTTTCGTTGGCCGCGCTGGGATGGCCGCCACA < 41bp 1 0.614266661497521 1 0.450779110193253 experiment 0.771466677004957 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DDX46 ENSG00000145833 upstream Human protein_coding chr5:134094483 chr5:134094463 . . 0 1 hm5C_associated_SNPs_5263 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:134094460-134094480
64251 chr5 134094501 134094501 1 + A G rs574119241 134094483 + 134094463 134094503 41 CACGTCCTGTTTTCGTTGGCCGCGCTGGGATGGCCGCCACA CACGTCCTGTTTTCGTTGGCCGCGCTGGGATGGCCGCCGCA < 41bp 1 0.616209298326202 1 0.559758722782135 experiment 0.767581403347596 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DDX46 ENSG00000145833 UTR5 Human protein_coding chr5:134094483 chr5:134094501 . . 0 39 hm5C_associated_SNPs_5264 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:134094478-134094518
64251 chr5 134236089 134236089 1 + G T rs114558517 134236088 + 134236068 134236108 41 AATGTTCCCAGCAGGCTGGGCGCAGTGGCTCATGCCTGTAA AATGTTCCCAGCAGGCTGGGCTCAGTGGCTCATGCCTGTAA < 41bp 1 0.792252853074442 1 0.47001788020134 experiment 0.415494293851116 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236088 chr5:134236089 . . 0 22 hm5C_associated_SNPs_5265 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236070-134236090
64251 chr5 134236089 134236089 1 + G T rs114558517 134236096 + 134236076 134236116 41 CAGCAGGCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCA CAGCAGGCTGGGCTCAGTGGCTCATGCCTGTAATCCCAGCA < 41bp 1 0.652379817261612 1 0.277602970600128 experiment 0.695240365476775 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236096 chr5:134236089 . . 0 14 hm5C_associated_SNPs_5266 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236070-134236090
64251 chr5 134236089 134236089 1 + G T rs114558517 134236098 + 134236078 134236118 41 GCAGGCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACT GCAGGCTGGGCTCAGTGGCTCATGCCTGTAATCCCAGCACT < 41bp 1 0.6830721766763 1 0.393440872430801 experiment 0.633855646647401 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236098 chr5:134236089 . . 0 12 hm5C_associated_SNPs_5267 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236070-134236090
64251 chr5 134236089 134236089 1 + G T rs114558517 134236102 + 134236082 134236122 41 GCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGG GCTGGGCTCAGTGGCTCATGCCTGTAATCCCAGCACTTTGG < 41bp 1 0.55277004626402 1 0.055841475725174 experiment 0.89445990747196 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236102 chr5:134236089 . . 0 8 hm5C_associated_SNPs_5268 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236070-134236090
64251 chr5 134236089 134236089 1 + G T rs114558517 134236103 + 134236083 134236123 41 CTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGG CTGGGCTCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGG < 41bp 1 0.798375620430087 1 0.141808211803436 experiment 0.403248759139826 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236103 chr5:134236089 . . 0 7 hm5C_associated_SNPs_5269 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236070-134236090
64251 chr5 134236100 134236100 1 + T C rs7728726 134236096 + 134236076 134236116 41 CAGCAGGCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCA CAGCAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCA < 41bp 1 0.626807109312843 1 0.145778715610504 experiment 0.746385781374313 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236096 chr5:134236100 . . 0 25 hm5C_associated_SNPs_5270 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 134236100 134236100 1 + T C rs7728726 134236102 + 134236082 134236122 41 GCTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGG GCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGG < 41bp 1 0.603463863795769 1 0.0828303694725037 experiment 0.793072272408462 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236102 chr5:134236100 . . 0 19 hm5C_associated_SNPs_5271 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 134236100 134236100 1 + T C rs7728726 134236103 + 134236083 134236123 41 CTGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGG CTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGG < 41bp 1 0.771405659045253 1 0.273410260677338 experiment 0.457188681909494 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236103 chr5:134236100 . . 0 18 hm5C_associated_SNPs_5272 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 134236100 134236100 1 + T C rs7728726 134236110 + 134236090 134236130 41 CAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAA CAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAA < 41bp 1 0.568767080203754 1 0.313697874546051 experiment 0.862465839592492 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236110 chr5:134236100 . . 0 11 hm5C_associated_SNPs_5273 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 134236100 134236100 1 + T C rs7728726 134236111 + 134236091 134236131 41 AGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAG AGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAG < 41bp 1 0.349513664235874 1 0.254628598690033 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236111 chr5:134236100 . . 0 10 hm5C_associated_SNPs_5274 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 134236100 134236100 1 + T C rs7728726 134236115 + 134236095 134236135 41 GCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGG GCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGG < 41bp 1 0.555760467649034 1 0.108138501644135 experiment 0.888479064701932 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TXNDC15 ENSG00000113621 UTR3 Human protein_coding chr5:134236115 chr5:134236100 . . 0 6 hm5C_associated_SNPs_5275 0 0 1 FAM120A POSTAR2 ENCODE chr5:134236090-134236117
64251 chr5 135369458 135369458 1 + C T rs368854767 135369452 + 135369432 135369472 41 TCTGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCA TCTGCTGCTTTTGTTTTCAGCCCCAATGTGTGTGCTGTGCA < 41bp 1 0.214974162803004 1 0.271773844957352 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369452 chr5:135369458 synonymous SNV . 0 27 hm5C_associated_SNPs_5276 1 0 2 DDX3X POSTAR2 ENCODE chr5:135369450-135369538
64251 chr5 135369458 135369458 1 + C T rs368854767 135369453 + 135369433 135369473 41 CTGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAG CTGCTGCTTTTGTTTTCAGCCCCAATGTGTGTGCTGTGCAG < 41bp 1 0.24764531086994 1 0.178556323051453 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369453 chr5:135369458 synonymous SNV . 0 26 hm5C_associated_SNPs_5277 1 0 2 DDX3X POSTAR2 ENCODE chr5:135369450-135369538
64251 chr5 135369458 135369458 1 + C T rs368854767 135369454 + 135369434 135369474 41 TGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAGA TGCTGCTTTTGTTTTCAGCCCCAATGTGTGTGCTGTGCAGA < 41bp 1 0.0377317819306982 1 0.0916386246681213 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369454 chr5:135369458 synonymous SNV . 0 25 hm5C_associated_SNPs_5278 1 0 2 DDX3X POSTAR2 ENCODE chr5:135369450-135369538
64251 chr5 135369458 135369458 1 + C T rs368854767 135369455 + 135369435 135369475 41 GCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAGAA GCTGCTTTTGTTTTCAGCCCCAATGTGTGTGCTGTGCAGAA < 41bp 1 0.134768456241057 1 0.14002537727356 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369455 chr5:135369458 synonymous SNV . 0 24 hm5C_associated_SNPs_5279 1 0 2 DDX3X POSTAR2 ENCODE chr5:135369450-135369538
64251 chr5 137518907 137518907 1 + G A rs139271096 137518909 + 137518889 137518929 41 TGCCCCACTACCTGTCCCGGCAAACATTCGCTTCTCCATCT TGCCCCACTACCTGTCCCAGCAAACATTCGCTTCTCCATCT < 41bp 1 0.248044359552315 1 0.126286625862122 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518909 chr5:137518907 synonymous SNV . 0 19 hm5C_associated_SNPs_5280 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:137518875-137518945
64251 chr5 137781792 137781792 1 + G A rs4835795 137781790 + 137781770 137781810 41 CAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCG CAATCCGCTTCTCAGAGGTCCTATCGTGTTTCCACTGCTCG < 41bp 1 0.0587065075836669 1 0.0673220455646515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control REEP2 ENSG00000132563 UTR3 Human protein_coding chr5:137781790 chr5:137781792 . . 0 23 hm5C_associated_SNPs_5283 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr5:137781781-137781802
64251 chr5 138609823 138609823 1 + C T rs528872797 138609817 + 138609797 138609837 41 CCCTCCGGCCTCTGCCGGTGCTGCTGCGCCCTGCGGAGCTC CCCTCCGGCCTCTGCCGGTGCTGCTGTGCCCTGCGGAGCTC < 41bp 1 0.719388330695057 1 0.083538681268692 experiment 0.561223338609887 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNHG4 ENSG00000015479 UTR5 Human protein_coding chr5:138609817 chr5:138609823 . . 0 27 hm5C_associated_SNPs_5284 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:138609801-138609834
64251 chr5 138614124 138614124 1 + T C rs191189910 138614130 + 138614110 138614150 41 ATTCATTCCAACATTGACTACCTCCTCTGTGCCAGGCCTGT ATTCATTCCAACATCGACTACCTCCTCTGTGCCAGGCCTGT < 41bp 1 0.00498324965140121 1 0.0182152390480042 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNHG4 ENSG00000015479 intronic Human protein_coding chr5:138614130 chr5:138614124 . . 0 15 hm5C_associated_SNPs_5285 0 0 24 HNRNPU POSTAR2 GSE34491,GSM850170 chr5:138614060-138614140
64251 chr5 138614470 138614470 1 + T C rs138489295 138614475 + 138614455 138614495 41 CTGTTTCAGGAATCATCCAGCGGTTGTCAGCTATCCAGGCT CTGTTTCAGGAATCACCCAGCGGTTGTCAGCTATCCAGGCT < 41bp 1 0.1140789720927 1 0.461465895175934 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORA74A ENSG00000200959 ncRNA_exonic Human snoRNA chr5:138614475 chr5:138614470 . . 0 16 hm5C_associated_SNPs_5286 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:138614444-138614496
64251 chr5 138614470 138614470 1 + T C rs138489295 138614489 + 138614469 138614509 41 ATCCAGCGGTTGTCAGCTATCCAGGCTCATGTGGTGCCTGT ACCCAGCGGTTGTCAGCTATCCAGGCTCATGTGGTGCCTGT < 41bp 1 0.421521542931998 1 0.955312609672546 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74A ENSG00000200959 ncRNA_exonic Human snoRNA chr5:138614489 chr5:138614470 . . 0 2 hm5C_associated_SNPs_5287 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:138614444-138614496
64251 chr5 138665490 138665490 1 + A G rs185734839 138665507 + 138665487 138665527 41 GAAACATTCCATGTTTTAATCTGAGCCTTGCAGACTTTCAT GAAGCATTCCATGTTTTAATCTGAGCCTTGCAGACTTTCAT < 41bp 1 0.397253430045439 1 0.275183856487274 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665507 chr5:138665490 . . 0 4 hm5C_associated_SNPs_5288 1 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:138665435-138665502
64251 chr5 138665518 138665518 1 + A G rs190578145 138665507 + 138665487 138665527 41 GAAACATTCCATGTTTTAATCTGAGCCTTGCAGACTTTCAT GAAACATTCCATGTTTTAATCTGAGCCTTGCGGACTTTCAT < 41bp 1 0.396619931244116 1 0.195142477750778 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138665507 chr5:138665518 . . 0 32 hm5C_associated_SNPs_5289 0 0 19 MOV10 POSTAR2 GSE37524,GSM921128 chr5:138665500-138665520
64251 chr5 139494087 139494087 1 + C T rs149139260 139494074 + 139494054 139494094 41 CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGT CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCTGTGGAGT < 41bp 1 0.195618704078604 1 0.287203729152679 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PURA ENSG00000185129 CDS Human protein_coding chr5:139494074 chr5:139494087 synonymous SNV . 0 34 hm5C_associated_SNPs_5290 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139494080-139494100
64251 chr5 139820696 139820696 1 + T C rs534783218 139820688 + 139820668 139820708 41 TAGATATTGTGAAATTATTACTTCTTCATGATGCTGATGTC TAGATATTGTGAAATTATTACTTCTTCACGATGCTGATGTC < 41bp 1 0.0971023626489117 1 0.20170670747757 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139820688 chr5:139820696 synonymous SNV . 0 29 hm5C_associated_SNPs_5291 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139820655-139820715
64251 chr5 139887565 139887565 1 + T C rs114577754 139887579 + 139887559 139887599 41 AGCCAATGTTGAACATAGGGCAAAGGTAAGCATTTTTTACT AGCCAACGTTGAACATAGGGCAAAGGTAAGCATTTTTTACT < 41bp 1 0.174084728430029 1 0.175607442855835 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139887579 chr5:139887565 synonymous SNV . 0 7 hm5C_associated_SNPs_5292 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139887531-139887565
64251 chr5 139947612 139947612 1 + G A rs74514412 139947624 + 139947604 139947644 41 TCCTGCTCGCTGGTGGTCAACGCCGTGCTCTCAGCAGTCCT TCCTGCTCACTGGTGGTCAACGCCGTGCTCTCAGCAGTCCT < 41bp 1 0.735299268084 1 0.0730755031108856 experiment 0.529401463831999 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947624 chr5:139947612 synonymous SNV . 0 9 hm5C_associated_SNPs_5293 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:139947585-139947645
64251 chr5 140098527 140098527 1 + G T rs181172383 140098517 + 140098497 140098537 41 GGAGATAGCCTCTGGGCTGGCTTTAGCTCAGCGGTTACTTC GGAGATAGCCTCTGGGCTGGCTTTAGCTCATCGGTTACTTC < 41bp 1 0.28802198610014 1 0.0539650619029999 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098517 chr5:140098527 . . 0 31 hm5C_associated_SNPs_5300 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140098500-140098540
64251 chr5 140098527 140098527 1 + G T rs181172383 140098523 + 140098503 140098543 41 AGCCTCTGGGCTGGCTTTAGCTCAGCGGTTACTTCGAGTAC AGCCTCTGGGCTGGCTTTAGCTCATCGGTTACTTCGAGTAC < 41bp 1 0.495674097602478 1 0.0906656682491302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098523 chr5:140098527 . . 0 25 hm5C_associated_SNPs_5301 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140098500-140098540
64251 chr5 140098527 140098527 1 + G T rs181172383 140098525 + 140098505 140098545 41 CCTCTGGGCTGGCTTTAGCTCAGCGGTTACTTCGAGTACAT CCTCTGGGCTGGCTTTAGCTCATCGGTTACTTCGAGTACAT < 41bp 1 0.544678755791278 1 0.0960227251052856 experiment 0.910642488417445 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098525 chr5:140098527 . . 0 23 hm5C_associated_SNPs_5302 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140098500-140098540
64251 chr5 140098549 140098549 1 + A G rs144771304 140098552 + 140098532 140098572 41 TACTTCGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAG TACTTCGAGTACATTGTGACCACCTCTCTGGGTGGTTCGAG < 41bp 1 0.32784815839814 1 0.0920535922050476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098552 chr5:140098549 . . 0 18 hm5C_associated_SNPs_5303 0 0 201 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098549 140098549 1 + A G rs144771304 140098557 + 140098537 140098577 41 CGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAGACCCG CGAGTACATTGTGACCACCTCTCTGGGTGGTTCGAGACCCG < 41bp 1 0.498100856719143 1 0.642456769943237 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098557 chr5:140098549 . . 0 13 hm5C_associated_SNPs_5304 0 0 201 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098555 140098555 1 + C G rs73273342 140098552 + 140098532 140098572 41 TACTTCGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAG TACTTCGAGTACATTGTAACCACGTCTCTGGGTGGTTCGAG < 41bp 1 0.590690286682347 1 0.282923698425293 experiment 0.818619426635305 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098552 chr5:140098555 . . 0 24 hm5C_associated_SNPs_5305 0 0 201 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098555 140098555 1 + C G rs73273342 140098557 + 140098537 140098577 41 CGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAGACCCG CGAGTACATTGTAACCACGTCTCTGGGTGGTTCGAGACCCG < 41bp 1 0.38052888716599 1 0.642126560211182 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098557 chr5:140098555 . . 0 19 hm5C_associated_SNPs_5306 0 0 201 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098555 140098555 1 + C G rs73273342 140098575 + 140098555 140098595 41 CTCTCTGGGTGGTTCGAGACCCGCGGGTGCTTTCCAGCTCT GTCTCTGGGTGGTTCGAGACCCGCGGGTGCTTTCCAGCTCT < 41bp 1 0.601394433476246 1 0.37421241402626 experiment 0.797211133047508 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098575 chr5:140098555 . . 0 1 hm5C_associated_SNPs_5307 0 0 201 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098560 140098560 1 + T C rs77337316 140098552 + 140098532 140098572 41 TACTTCGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAG TACTTCGAGTACATTGTAACCACCTCTCCGGGTGGTTCGAG < 41bp 1 0.417619362498134 1 0.207044959068298 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098552 chr5:140098560 . . 0 29 hm5C_associated_SNPs_5308 0 0 229 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098560 140098560 1 + T C rs77337316 140098557 + 140098537 140098577 41 CGAGTACATTGTAACCACCTCTCTGGGTGGTTCGAGACCCG CGAGTACATTGTAACCACCTCTCCGGGTGGTTCGAGACCCG < 41bp 1 0.63333993541863 1 0.799658298492432 experiment 0.73332012916274 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098557 chr5:140098560 . . 0 24 hm5C_associated_SNPs_5309 0 0 229 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098560 140098560 1 + T C rs77337316 140098575 + 140098555 140098595 41 CTCTCTGGGTGGTTCGAGACCCGCGGGTGCTTTCCAGCTCT CTCTCCGGGTGGTTCGAGACCCGCGGGTGCTTTCCAGCTCT < 41bp 1 0.583870966280003 1 0.471786946058273 experiment 0.832258067439995 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098575 chr5:140098560 . . 0 6 hm5C_associated_SNPs_5310 0 0 229 PTBP1 POSTAR2 GSE19323,GSM480476 chr5:140098540-140098560
64251 chr5 140098596 140098596 1 + T C rs12188417 140098584 + 140098564 140098604 41 TGGTTCGAGACCCGCGGGTGCTTTCCAGCTCTTTTACTGCT TGGTTCGAGACCCGCGGGTGCTTTCCAGCTCTCTTACTGCT < 41bp 1 0.0773554498309179 1 0.0137845575809479 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098584 chr5:140098596 . . 0 33 hm5C_associated_SNPs_5311 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:140098572-140098598
64251 chr5 140098596 140098596 1 + T C rs12188417 140098588 + 140098568 140098608 41 TCGAGACCCGCGGGTGCTTTCCAGCTCTTTTACTGCTGAAG TCGAGACCCGCGGGTGCTTTCCAGCTCTCTTACTGCTGAAG < 41bp 1 0.24963697886543 1 0.802454173564911 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098588 chr5:140098596 . . 0 29 hm5C_associated_SNPs_5312 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:140098572-140098598
64251 chr5 140098596 140098596 1 + T C rs12188417 140098594 + 140098574 140098614 41 CCCGCGGGTGCTTTCCAGCTCTTTTACTGCTGAAGTTCAGC CCCGCGGGTGCTTTCCAGCTCTCTTACTGCTGAAGTTCAGC < 41bp 1 0.134356254628052 1 0.26275509595871 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-2 ENSG00000202111 ncRNA_exonic Human misc_RNA chr5:140098594 chr5:140098596 . . 0 23 hm5C_associated_SNPs_5313 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:140098572-140098598
64251 chr5 140105747 140105747 1 + T C rs559442132 140105746 + 140105726 140105766 41 ATCCGAAAGCAACCTCTGGGCTGGCTTTAGCTCAGCGGTTA ATCCGAAAGCAACCTCTGGGCCGGCTTTAGCTCAGCGGTTA < 41bp 1 0.361752220201389 1 0.249687969684601 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105746 chr5:140105747 . . 0 22 hm5C_associated_SNPs_5314 0 0 54 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105747 140105747 1 + T C rs559442132 140105750 + 140105730 140105770 41 GAAAGCAACCTCTGGGCTGGCTTTAGCTCAGCGGTTACTTC GAAAGCAACCTCTGGGCCGGCTTTAGCTCAGCGGTTACTTC < 41bp 1 0.143369883216649 1 0.0455813407897949 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105750 chr5:140105747 . . 0 18 hm5C_associated_SNPs_5315 0 0 54 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105747 140105747 1 + T C rs559442132 140105756 + 140105736 140105776 41 AACCTCTGGGCTGGCTTTAGCTCAGCGGTTACTTCGCGTGT AACCTCTGGGCCGGCTTTAGCTCAGCGGTTACTTCGCGTGT < 41bp 1 0.605610646929489 1 0.139523059129715 experiment 0.788778706141023 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105756 chr5:140105747 . . 0 12 hm5C_associated_SNPs_5316 0 0 54 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105747 140105747 1 + T C rs559442132 140105767 + 140105747 140105787 41 TGGCTTTAGCTCAGCGGTTACTTCGCGTGTCATCAAACCAC CGGCTTTAGCTCAGCGGTTACTTCGCGTGTCATCAAACCAC < 41bp 1 0.27247189585316 1 0.375561147928238 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|27356879;GSE66010;miCLIP;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105767 chr5:140105747 . . 0 1 hm5C_associated_SNPs_5317 0 0 54 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105807 + 140105787 140105827 41 CCTCTCTGGGTTGTTCGAGACCCGCGGGCGCTCTCCAGCCC CCTCTCTGGGTTGTTCGAGACCCGCAGGCGCTCTCCAGCCC < 41bp 1 0.472951114817064 1 0.0938428938388824 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105807 chr5:140105812 . . 0 26 hm5C_associated_SNPs_5318 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105808 + 140105788 140105828 41 CTCTCTGGGTTGTTCGAGACCCGCGGGCGCTCTCCAGCCCT CTCTCTGGGTTGTTCGAGACCCGCAGGCGCTCTCCAGCCCT < 41bp 1 0.764362488352778 1 0.418382942676544 experiment 0.471275023294444 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105808 chr5:140105812 . . 0 25 hm5C_associated_SNPs_5319 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105811 + 140105791 140105831 41 TCTGGGTTGTTCGAGACCCGCGGGCGCTCTCCAGCCCTCTT TCTGGGTTGTTCGAGACCCGCAGGCGCTCTCCAGCCCTCTT < 41bp 1 0.717187133480167 1 0.822022676467896 experiment 0.565625733039667 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105811 chr5:140105812 . . 0 22 hm5C_associated_SNPs_5320 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105815 + 140105795 140105835 41 GGTTGTTCGAGACCCGCGGGCGCTCTCCAGCCCTCTTACTG GGTTGTTCGAGACCCGCAGGCGCTCTCCAGCCCTCTTACTG < 41bp 1 0.20154906610574 1 0.0407235622406006 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105815 chr5:140105812 . . 0 18 hm5C_associated_SNPs_5321 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105817 + 140105797 140105837 41 TTGTTCGAGACCCGCGGGCGCTCTCCAGCCCTCTTACTGCT TTGTTCGAGACCCGCAGGCGCTCTCCAGCCCTCTTACTGCT < 41bp 1 0.13079196159126 1 0.0245522260665894 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105817 chr5:140105812 . . 0 16 hm5C_associated_SNPs_5322 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105821 + 140105801 140105841 41 TCGAGACCCGCGGGCGCTCTCCAGCCCTCTTACTGCTGAAG TCGAGACCCGCAGGCGCTCTCCAGCCCTCTTACTGCTGAAG < 41bp 1 0.192328827020275 1 0.814488232135773 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105821 chr5:140105812 . . 0 12 hm5C_associated_SNPs_5323 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105822 + 140105802 140105842 41 CGAGACCCGCGGGCGCTCTCCAGCCCTCTTACTGCTGAAGT CGAGACCCGCAGGCGCTCTCCAGCCCTCTTACTGCTGAAGT < 41bp 1 0.285820056519235 1 0.68761533498764 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105822 chr5:140105812 . . 0 11 hm5C_associated_SNPs_5324 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105825 + 140105805 140105845 41 GACCCGCGGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCA GACCCGCAGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCA < 41bp 1 0.0599361974763698 1 0.100354254245758 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105825 chr5:140105812 . . 0 8 hm5C_associated_SNPs_5325 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105826 + 140105806 140105846 41 ACCCGCGGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCAG ACCCGCAGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCAG < 41bp 1 0.0872425266758277 1 0.194388002157211 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105826 chr5:140105812 . . 0 7 hm5C_associated_SNPs_5326 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140105812 140105812 1 + G A rs73273380 140105829 + 140105809 140105849 41 CGCGGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCAGCTC CGCAGGCGCTCTCCAGCCCTCTTACTGCTGAAGTTCAGCTC < 41bp 1 0.154894433416235 1 0.389580309391022 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VTRNA1-3 ENSG00000202515 ncRNA_exonic Human misc_RNA chr5:140105829 chr5:140105812 . . 0 4 hm5C_associated_SNPs_5327 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:140105720-140105860
64251 chr5 140731334 140731334 1 + G A rs371048978 140731316 + 140731296 140731336 41 GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCATG < 41bp 1 0.214090828228702 1 0.0390665829181671 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731316 chr5:140731334 nonsynonymous SNV 0.278 2 39 hm5C_associated_SNPs_5330 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr5 141531833 141531833 1 + C T rs114615467 141531820 + 141531800 141531840 41 TCTGTATGAACACCTGGAAGCAAAATCATAGTGCAAAAATA TCTGTATGAACACCTGGAAGCAAAATCATAGTGTAAAAATA < 41bp 1 0.581411560676116 1 0.168559163808823 experiment 0.837176878647768 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NDFIP1 ENSG00000131507 UTR3 Human protein_coding chr5:141531820 chr5:141531833 . . 0 34 hm5C_associated_SNPs_5334 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:141531736-141531856
64251 chr5 148725062 148725062 1 + A C rs115212986 148725078 + 148725058 148725098 41 TCGCAGCAAGTGCGCGTGCGCTGCCTCTCAGCCCAAATTGG TCGCCGCAAGTGCGCGTGCGCTGCCTCTCAGCCCAAATTGG < 41bp 1 0.621146428596823 1 0.083253026008606 experiment 0.757707142806354 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GRPEL2 ENSG00000164284 UTR5 Human protein_coding chr5:148725078 chr5:148725062 . . 0 5 hm5C_associated_SNPs_5343 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:148725060-148725080
64251 chr5 149361966 149361966 1 + C T rs1046710 149361950 + 149361930 149361970 41 CCATTCCTGTCCTTAAGGCACAGTCTCATCAGAAGTCTAAT CCATTCCTGTCCTTAAGGCACAGTCTCATCAGAAGTTTAAT < 41bp 1 0.112412616179156 1 0.0572954118251801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC26A2 ENSG00000155850 UTR3 Human protein_coding chr5:149361950 chr5:149361966 . . 0 37 hm5C_associated_SNPs_5345 5 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:149361964-149361981
64251 chr5 149361966 149361966 1 + C T rs1046710 149361954 + 149361934 149361974 41 TCCTGTCCTTAAGGCACAGTCTCATCAGAAGTCTAATACCT TCCTGTCCTTAAGGCACAGTCTCATCAGAAGTTTAATACCT < 41bp 1 0.277266079412691 1 0.242406517267227 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC26A2 ENSG00000155850 UTR3 Human protein_coding chr5:149361954 chr5:149361966 . . 0 33 hm5C_associated_SNPs_5346 5 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:149361964-149361981
64251 chr5 149406356 149406356 1 + C A rs61739331 149406376 + 149406356 149406396 41 CATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAG AATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAG < 41bp 1 0.51350770647061 1 0.305736035108566 experiment 0.972984587058779 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406376 chr5:149406356 synonymous SNV . 0 1 hm5C_associated_SNPs_5350 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149406334-149406363
64251 chr5 149406413 149406413 1 + G A rs147489392 149406393 + 149406373 149406413 41 CAGCCCCAGTTAACGTGGGGCGAGGCAGCAGCATGGGACTG CAGCCCCAGTTAACGTGGGGCGAGGCAGCAGCATGGGACTA < 41bp 1 0.400701853457963 1 0.533246397972107 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406393 chr5:149406413 synonymous SNV . 0 41 hm5C_associated_SNPs_5351 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:149406403-149406429
64251 chr5 149751756 149751756 1 + G A rs182776703 149751738 + 149751718 149751758 41 CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGAAT < 41bp 1 0.310915598003288 1 0.657943069934845 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751738 chr5:149751756 nonsynonymous SNV 0.197 0 39 hm5C_associated_SNPs_5352 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr5 149751756 149751756 1 + G A rs182776703 149751759 + 149751739 149751779 41 AGAGAGTAGTGAGGAGGGATCTGAAAGTGAGGAGGAGGCCC AGAGAGTAGTGAGGAGGAATCTGAAAGTGAGGAGGAGGCCC < 41bp 1 0.757093277958963 1 0.737690448760986 experiment 0.485813444082074 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751759 chr5:149751756 nonsynonymous SNV 0.197 0 18 hm5C_associated_SNPs_5353 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr5 149753894 149753894 1 + G A rs144327167 149753906 + 149753886 149753926 41 GAGCAGCAGCGAGGAGTCATCTGACAGTGAGGAGGAGACGC GAGCAGCAACGAGGAGTCATCTGACAGTGAGGAGGAGACGC < 41bp 1 0.368056608141032 1 0.315954685211182 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149753906 chr5:149753894 nonsynonymous SNV 0.048 3 9 hm5C_associated_SNPs_5354 2 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149753871-149753903
64251 chr5 149754325 149754325 1 + C T rs114326915 149754323 + 149754303 149754343 41 GCGGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGA GCGGGGAAGCGGGAGGAGGACTTGCAGAGCAGCAGCGAGGA < 41bp 1 0.30866854516966 1 0.0967078804969788 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754323 chr5:149754325 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_5355 1 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754325 149754325 1 + C T rs114326915 149754335 + 149754315 149754355 41 GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA GAGGAGGACTTGCAGAGCAGCAGCGAGGAATCGGACAGTGA < 41bp 1 0.541664533054368 1 0.219207555055618 experiment 0.916670933891264 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754335 chr5:149754325 nonsynonymous SNV 0.001 0 11 hm5C_associated_SNPs_5356 1 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149755839 149755839 1 + T G rs140334121 149755829 + 149755809 149755849 41 CCAGAGACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG CCAGAGACCAGCAGAGGATTCTTCAAGCAGGGAGGAATCAG < 41bp 1 0.392367422101162 1 0.220952570438385 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755829 chr5:149755839 nonsynonymous SNV 0.519 3 31 hm5C_associated_SNPs_5357 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149755839 149755839 1 + T G rs140334121 149755836 + 149755816 149755856 41 CCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATAGTGA CCAGCAGAGGATTCTTCAAGCAGGGAGGAATCAGATAGTGA < 41bp 1 0.658952086362749 1 0.795298337936401 experiment 0.682095827274501 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755836 chr5:149755839 nonsynonymous SNV 0.519 3 24 hm5C_associated_SNPs_5358 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149755839 149755839 1 + T G rs140334121 149755847 + 149755827 149755867 41 TTCTTCAAGCAGTGAGGAATCAGATAGTGAGGAAGAGAAGA TTCTTCAAGCAGGGAGGAATCAGATAGTGAGGAAGAGAAGA < 41bp 1 0.393175198170289 1 0.544870376586914 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755847 chr5:149755839 nonsynonymous SNV 0.519 3 13 hm5C_associated_SNPs_5359 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149755845 149755845 1 + A G rs34796297 149755829 + 149755809 149755849 41 CCAGAGACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG CCAGAGACCAGCAGAGGATTCTTCAAGCAGTGAGGAGTCAG < 41bp 1 0.382339311837297 1 0.317437469959259 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755829 chr5:149755845 synonymous SNV . 0 37 hm5C_associated_SNPs_5360 2 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149755845 149755845 1 + A G rs34796297 149755836 + 149755816 149755856 41 CCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATAGTGA CCAGCAGAGGATTCTTCAAGCAGTGAGGAGTCAGATAGTGA < 41bp 1 0.276537384038836 1 0.242111355066299 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755836 chr5:149755845 synonymous SNV . 0 30 hm5C_associated_SNPs_5361 2 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149755845 149755845 1 + A G rs34796297 149755847 + 149755827 149755867 41 TTCTTCAAGCAGTGAGGAATCAGATAGTGAGGAAGAGAAGA TTCTTCAAGCAGTGAGGAGTCAGATAGTGAGGAAGAGAAGA < 41bp 1 0.286936168945662 1 0.444153875112534 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755847 chr5:149755845 synonymous SNV . 0 19 hm5C_associated_SNPs_5362 2 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:149755819-149755859
64251 chr5 149756091 149756091 1 + A G rs149384321 149756110 + 149756090 149756130 41 TACAGTCACCCAGGTGAAAGCTGAAAAGCAGGAAGACTCTG TGCAGTCACCCAGGTGAAAGCTGAAAAGCAGGAAGACTCTG < 41bp 1 0.646929270808856 1 0.410256296396255 experiment 0.706141458382288 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149756110 chr5:149756091 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_5363 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr5:149756080-149756100
64251 chr5 149772280 149772280 1 + C A rs1136103 149772283 + 149772263 149772303 41 TCCAGTAGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGG TCCAGTAGGTCCCACCCACTCCAGGACAGAGACCCTGGTGG < 41bp 1 0.584625800814109 1 0.846539556980133 experiment 0.830748398371782 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149772283 chr5:149772280 nonsynonymous SNV 0.009 3 18 hm5C_associated_SNPs_5364 0 0 4 SUB1 POSTAR2 ENCODE chr5:149772241-149772283
64251 chr5 149776067 149776067 1 + A G rs55980697 149776077 + 149776057 149776097 41 GACACCACCAAGGAGAGCAGCAGGAAGGGCTGGGAGAGCCG GACACCACCAGGGAGAGCAGCAGGAAGGGCTGGGAGAGCCG < 41bp 1 0.795353833217872 1 0.673698782920837 experiment 0.409292333564257 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149776077 chr5:149776067 nonsynonymous SNV 0.406 3 11 hm5C_associated_SNPs_5365 2 0 5 BUD13 POSTAR2 ENCODE chr5:149776030-149776073
64251 chr5 149900802 149900802 1 + G T rs3733935 149900820 + 149900800 149900840 41 AGGTCTCGGAGGCCAGGATGCCTGCCCTGGCATGCCTCCGG AGTTCTCGGAGGCCAGGATGCCTGCCCTGGCATGCCTCCGG < 41bp 1 0.168414755030193 1 0.238709568977356 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control NDST1 ENSG00000070614 UTR5 Human protein_coding chr5:149900820 chr5:149900802 . . 0 3 hm5C_associated_SNPs_5366 0 0 5 DDX3X POSTAR2 ENCODE chr5:149900738-149900839
64251 chr5 149900802 149900802 1 + G T rs3733935 149900821 + 149900801 149900841 41 GGTCTCGGAGGCCAGGATGCCTGCCCTGGCATGCCTCCGGA GTTCTCGGAGGCCAGGATGCCTGCCCTGGCATGCCTCCGGA < 41bp 1 0.592311348555628 1 0.407221555709839 experiment 0.815377302888744 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control NDST1 ENSG00000070614 UTR5 Human protein_coding chr5:149900821 chr5:149900802 . . 0 2 hm5C_associated_SNPs_5367 0 0 5 DDX3X POSTAR2 ENCODE chr5:149900738-149900839
64251 chr5 149925005 149925005 1 + C G rs141935011 149925006 + 149924986 149925026 41 CCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGA CCCAAAGCCAAGGTCCTGAGCATCCTCATCAACCCCGCGGA < 41bp 1 0.130212530459463 1 0.0261042416095734 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDST1 ENSG00000070614 CDS Human protein_coding chr5:149925006 chr5:149925005 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_5368 0 0 1 PCBP2 POSTAR2 ENCODE chr5:149924971-149925046
64251 chr5 149934315 149934315 1 + C T rs533528857 149934305 + 149934285 149934325 41 CTCCCTCACATGGTGCTAGGCTGGGAGCTGCCCTGAGAGCT CTCCCTCACATGGTGCTAGGCTGGGAGCTGTCCTGAGAGCT < 41bp 1 0.611890452095637 1 0.611881613731384 experiment 0.776219095808727 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDST1 ENSG00000070614 UTR3 Human protein_coding chr5:149934305 chr5:149934315 . . 0 31 hm5C_associated_SNPs_5369 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149934292-149934319
64251 chr5 149935375 149935375 1 + G A rs116406510 149935356 + 149935336 149935376 41 AGCTCCACTTCTCTCTGCCTCTGGCTATGGGAAGGAGCAGG AGCTCCACTTCTCTCTGCCTCTGGCTATGGGAAGGAGCAAG < 41bp 1 0.432425357592297 1 0.889524340629578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDST1 ENSG00000070614 UTR3 Human protein_coding chr5:149935356 chr5:149935375 . . 0 40 hm5C_associated_SNPs_5370 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:149935335-149935383
64251 chr5 149935378 149935378 1 + G A rs115083931 149935398 + 149935378 149935418 41 GGTTGGAAATCCTGTGACAGCAGAGATCTTCTGGATTTTTG AGTTGGAAATCCTGTGACAGCAGAGATCTTCTGGATTTTTG < 41bp 1 0.686120345712802 1 0.40265029668808 experiment 0.627759308574396 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDST1 ENSG00000070614 UTR3 Human protein_coding chr5:149935398 chr5:149935378 . . 0 1 hm5C_associated_SNPs_5371 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:149935335-149935383
64251 chr5 150028796 150028796 1 + C A rs34850457 150028797 + 150028777 150028817 41 AACTTCACTGCACCCCCCACCTACACTGAGACCTTGTCCAC AACTTCACTGCACCCCCCAACTACACTGAGACCTTGTCCAC < 41bp 1 0.562239709178344 1 0.665949940681458 experiment 0.875520581643312 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNPO ENSG00000171992 CDS Human protein_coding chr5:150028797 chr5:150028796 nonsynonymous SNV 0.936 4 20 hm5C_associated_SNPs_5372 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:150028786-150028860
64251 chr5 150639409 150639409 1 + A G rs153477 150639408 + 150639388 150639428 41 ACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGAC ACTCTGGAGCCTGACCCCATCGTCGTTCCTGGAAATGTGAC < 41bp 1 0.573322753939397 1 0.406935214996338 experiment 0.853354492121206 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GM2A ENSG00000196743 CDS Human protein_coding chr5:150639408 chr5:150639409 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_5375 2 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:150639381-150639416
64251 chr5 150639412 150639412 1 + G A rs201829650 150639408 + 150639388 150639428 41 ACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGAC ACTCTGGAGCCTGACCCCATCATCATTCCTGGAAATGTGAC < 41bp 1 0.656903888676491 1 0.364517569541931 experiment 0.686192222647018 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GM2A ENSG00000196743 CDS Human protein_coding chr5:150639408 chr5:150639412 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_5376 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:150639381-150639416
64251 chr5 153755996 153755996 1 + A G rs116636563 153756011 + 153755991 153756031 41 AGCCAATGTCAACTGGCTTCCCCCCTTGCTTGGTAAGGGAG AGCCAGTGTCAACTGGCTTCCCCCCTTGCTTGGTAAGGGAG < 41bp 1 0.0494112691153559 1 0.207721501588821 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153756011 chr5:153755996 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_5377 0 0 4 DDX24 POSTAR2 ENCODE chr5:153755956-153756023
64251 chr5 153783753 153783753 1 + C T rs6580076 153783741 + 153783721 153783761 41 TACAGGAAGTATGTGCCCTACAAGGTCCCGGCCGGAGTCAG TACAGGAAGTATGTGCCCTACAAGGTCCCGGCTGGAGTCAG < 41bp 1 0.635852676063672 1 0.239557802677155 experiment 0.728294647872656 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153783741 chr5:153783753 synonymous SNV . 0 33 hm5C_associated_SNPs_5378 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:153783733-153783761
64251 chr5 153797224 153797224 1 + C T rs191203253 153797232 + 153797212 153797252 41 GCTATGGACATGCGGGATATCTCCCCCTGCTCTCTGGGTAT GCTATGGACATGTGGGATATCTCCCCCTGCTCTCTGGGTAT < 41bp 1 0.221749239561106 1 0.461140275001526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153797232 chr5:153797224 . . 0 13 hm5C_associated_SNPs_5379 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153797212-153797240
64251 chr5 153825649 153825649 1 + G A rs372910978 153825667 + 153825647 153825687 41 GGGCCGGACGAGCCGCGGGGCCCGGGTGCCGCGGGTTCGAG GGACCGGACGAGCCGCGGGGCCCGGGTGCCGCGGGTTCGAG < 41bp 1 0.765841227282416 1 0.25756824016571 experiment 0.468317545435167 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SAP30L ENSG00000164576 UTR5 Human protein_coding chr5:153825667 chr5:153825649 . . 0 3 hm5C_associated_SNPs_5380 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153825628-153825652
64251 chr5 154194933 154194933 1 + G T rs191135796 154194928 + 154194908 154194948 41 CAAGGCCAAGTTGGTTCAAACTGTTGGAGAACAGAGTTGGC CAAGGCCAAGTTGGTTCAAACTGTTTGAGAACAGAGTTGGC < 41bp 1 0.174957870517996 1 0.0864949822425842 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LARP1 ENSG00000155506 UTR3 Human protein_coding chr5:154194928 chr5:154194933 . . 0 26 hm5C_associated_SNPs_5381 0 0 55 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:154194780-154194980
64251 chr5 154196907 154196907 1 + C T rs555288569 154196902 + 154196882 154196922 41 GAGGAAAACTTGTCATCTGGCTTTGCGGAGAAGGTTCCACC GAGGAAAACTTGTCATCTGGCTTTGTGGAGAAGGTTCCACC < 41bp 1 0.141659107477812 1 0.116380214691162 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARP1 ENSG00000155506 UTR3 Human protein_coding chr5:154196902 chr5:154196907 . . 0 26 hm5C_associated_SNPs_5382 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:154196829-154196925
64251 chr5 159437603 159437603 1 + C T rs540178162 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TATTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC < 41bp 1 0.77924437992516 1 0.162940710783005 experiment 0.441511240149679 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437603 nonsynonymous SNV 0.777 0 3 hm5C_associated_SNPs_5387 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159437582-159437613
64251 chr5 159849882 159849882 1 + A C rs185928602 159849863 + 159849843 159849883 41 GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAA GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCCA < 41bp 1 0.131615885318835 1 0.212024092674255 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159849863 chr5:159849882 synonymous SNV . 0 40 hm5C_associated_SNPs_5388 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr5:159849847-159849884
64251 chr5 162864709 162864709 1 + G C rs2069340 162864690 + 162864670 162864710 41 GGACAGTCCCCCTCCCCGGGCCTCTCTCCTCTTGCCTACGA GGACAGTCCCCCTCCCCGGGCCTCTCTCCTCTTGCCTACCA < 41bp 1 0.0995269159041038 1 0.0486246347427368 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CCNG1 ENSG00000113328 UTR5 Human protein_coding chr5:162864690 chr5:162864709 . . 0 40 hm5C_associated_SNPs_5389 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:162864600-162864720
64251 chr5 162864785 162864785 1 + G A rs368697196 162864767 + 162864747 162864787 41 GTGGGGTGAGGTGAGCAGGCCCGGGGAGGGTGGTTACCGCT GTGGGGTGAGGTGAGCAGGCCCGGGGAGGGTGGTTACCACT < 41bp 1 0.767195513308948 1 0.37683117389679 experiment 0.465608973382103 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCNG1 ENSG00000113328 UTR5 Human protein_coding chr5:162864767 chr5:162864785 . . 0 39 hm5C_associated_SNPs_5390 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:162864737-162864807
64251 chr5 162870787 162870787 1 + G A rs565093529 162870773 + 162870753 162870793 41 AATGGATTTAAGCTATGAAGCCTCAAAACATCACGAGATAA AATGGATTTAAGCTATGAAGCCTCAAAACATCACAAGATAA < 41bp 1 0.219086010726356 1 0.298170387744904 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CCNG1 ENSG00000113328 UTR3 Human protein_coding chr5:162870773 chr5:162870787 . . 0 35 hm5C_associated_SNPs_5391 0 0 34 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:162870680-162870854
64251 chr5 167913510 167913510 1 + G A rs244903 167913509 + 167913489 167913529 41 GACGCTGATGGGAGGATGGACGTACTGGTGTCTGAGTGCTC GACGCTGATGGGAGGATGGACATACTGGTGTCTGAGTGCTC < 41bp 1 0.234544168364331 1 0.11043593287468 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167913509 chr5:167913510 nonsynonymous SNV 0.604 0 22 hm5C_associated_SNPs_5401 1 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:167913483-167913515
64251 chr5 167943827 167943827 1 + G A rs653568 167943826 + 167943806 167943846 41 TGCTGCTCAGACATCCGTTGCGTATGGCTGCATCAAATATG TGCTGCTCAGACATCCGTTGCATATGGCTGCATCAAATATG < 41bp 1 0.137190194722491 1 0.0282550156116486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943826 chr5:167943827 synonymous SNV . 0 22 hm5C_associated_SNPs_5402 1 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:167943780-167943869
64251 chr5 169015479 169015479 1 + G A rs116483731 169015481 + 169015461 169015501 41 AAGAGGCTGAAGAAGAGCGACTAAAAGCTGCACAGTATGGT AAGAGGCTGAAGAAGAGCAACTAAAAGCTGCACAGTATGGT < 41bp 1 0.480665460148667 1 0.395975291728973 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169015481 chr5:169015479 nonsynonymous SNV 0.175 0 19 hm5C_associated_SNPs_5403 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr5:169015460-169015505
64251 chr5 172447762 172447762 1 + G A rs17075508 172447743 + 172447723 172447763 41 GGTTTCTTTCCAGCAGTAGTCAGCCATCCGGACAGAACCGT GGTTTCTTTCCAGCAGTAGTCAGCCATCCGGACAGAACCAT < 41bp 1 0.265812238720448 1 0.75439178943634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74B ENSG00000212402 ncRNA_exonic Human snoRNA chr5:172447743 chr5:172447762 . . 0 40 hm5C_associated_SNPs_5412 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr5:172447760-172447780
64251 chr5 172447762 172447762 1 + G A rs17075508 172447746 + 172447726 172447766 41 TTCTTTCCAGCAGTAGTCAGCCATCCGGACAGAACCGTTCC TTCTTTCCAGCAGTAGTCAGCCATCCGGACAGAACCATTCC < 41bp 1 0.0125333459923127 1 0.0604527592658997 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74B ENSG00000212402 ncRNA_exonic Human snoRNA chr5:172447746 chr5:172447762 . . 0 37 hm5C_associated_SNPs_5413 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr5:172447760-172447780
64251 chr5 172447762 172447762 1 + G A rs17075508 172447750 + 172447730 172447770 41 TTCCAGCAGTAGTCAGCCATCCGGACAGAACCGTTCCTGTG TTCCAGCAGTAGTCAGCCATCCGGACAGAACCATTCCTGTG < 41bp 1 0.644006587641951 1 0.934125065803528 experiment 0.711986824716099 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74B ENSG00000212402 ncRNA_exonic Human snoRNA chr5:172447750 chr5:172447762 . . 0 33 hm5C_associated_SNPs_5414 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr5:172447760-172447780
64251 chr5 172447762 172447762 1 + G A rs17075508 172447755 + 172447735 172447775 41 GCAGTAGTCAGCCATCCGGACAGAACCGTTCCTGTGATGGT GCAGTAGTCAGCCATCCGGACAGAACCATTCCTGTGATGGT < 41bp 1 0.246439982672654 1 0.316506505012512 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74B ENSG00000212402 ncRNA_exonic Human snoRNA chr5:172447755 chr5:172447762 . . 0 28 hm5C_associated_SNPs_5415 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr5:172447760-172447780
64251 chr5 172447762 172447762 1 + G A rs17075508 172447760 + 172447740 172447780 41 AGTCAGCCATCCGGACAGAACCGTTCCTGTGATGGTGTTAC AGTCAGCCATCCGGACAGAACCATTCCTGTGATGGTGTTAC < 41bp 1 0.0271320025025088 1 0.0433060824871063 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA74B ENSG00000212402 ncRNA_exonic Human snoRNA chr5:172447760 chr5:172447762 . . 0 23 hm5C_associated_SNPs_5416 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr5:172447760-172447780
64251 chr5 172461659 172461659 1 + G A rs138021157 172461669 + 172461649 172461689 41 TGAGAGATACGTTACTCTCTCCTTGGAATCTGTGGATTTGA TGAGAGATACATTACTCTCTCCTTGGAATCTGTGGATTTGA < 41bp 1 0.27562206979685 1 0.0829944014549255 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461669 chr5:172461659 . . 0 11 hm5C_associated_SNPs_5417 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:172461531-172461746
64251 chr5 172461659 172461659 1 + G A rs138021157 172461670 + 172461650 172461690 41 GAGAGATACGTTACTCTCTCCTTGGAATCTGTGGATTTGAA GAGAGATACATTACTCTCTCCTTGGAATCTGTGGATTTGAA < 41bp 1 0.522981418898329 1 0.110203325748444 experiment 0.954037162203343 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461670 chr5:172461659 . . 0 10 hm5C_associated_SNPs_5418 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:172461531-172461746
64251 chr5 172461817 172461817 1 + G A rs15179 172461801 + 172461781 172461821 41 AGCACGTTCAGAGGGAAGAGCCATCTCAACAGAATCGCACC AGCACGTTCAGAGGGAAGAGCCATCTCAACAGAATCACACC < 41bp 1 0.250512329652773 1 0.451369881629944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP6V0E1 ENSG00000113732 UTR3 Human protein_coding chr5:172461801 chr5:172461817 . . 0 37 hm5C_associated_SNPs_5419 0 0 18 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:172461755-172461835
64251 chr5 174954974 174954974 1 + G C rs560534844 174954964 + 174954944 174954984 41 ACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCG ACGGAGTCTCGCTCTGTCACCCAGGCTGGACTGCAGTGGCG < 41bp 1 0.650220595871268 1 0.441585898399353 experiment 0.699558808257464 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174954964 chr5:174954974 . . 0 31 hm5C_associated_SNPs_5420 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174954941-174955000
64251 chr5 174954974 174954974 1 + G C rs560534844 174954965 + 174954945 174954985 41 CGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGT CGGAGTCTCGCTCTGTCACCCAGGCTGGACTGCAGTGGCGT < 41bp 1 0.703129646369328 1 0.768962502479553 experiment 0.593740707261344 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174954965 chr5:174954974 . . 0 30 hm5C_associated_SNPs_5421 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174954941-174955000
64251 chr5 174954974 174954974 1 + G C rs560534844 174954994 + 174954974 174955014 41 GTGCAGTGGCGTAGTCTCGGCTCACTGCAAGCTCCGCCTCC CTGCAGTGGCGTAGTCTCGGCTCACTGCAAGCTCCGCCTCC < 41bp 1 0.635792789859349 1 0.0555755198001862 experiment 0.728414420281302 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174954994 chr5:174954974 . . 0 1 hm5C_associated_SNPs_5422 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174954941-174955000
64251 chr5 174955072 174955072 1 + C A rs186202668 174955074 + 174955054 174955094 41 GCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTT GCTGGGACTACAGGCGCCAGCCACCACGCCCGGCTAATTTT < 41bp 1 0.360551456463611 1 0.194098502397537 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955074 chr5:174955072 . . 0 19 hm5C_associated_SNPs_5424 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:174955045-174955078
64251 chr5 174955072 174955072 1 + C A rs186202668 174955080 + 174955060 174955100 41 ACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTGTA ACTACAGGCGCCAGCCACCACGCCCGGCTAATTTTTTTGTA < 41bp 1 0.771779424009925 1 0.477966129779816 experiment 0.45644115198015 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955080 chr5:174955072 . . 0 13 hm5C_associated_SNPs_5425 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:174955045-174955078
64251 chr5 174955154 174955154 1 + C T rs533623003 174955156 + 174955136 174955176 41 TCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGT TCTCCTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAGGT < 41bp 1 0.64887012092169 1 0.179055988788605 experiment 0.702259758156621 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955156 chr5:174955154 . . 0 19 hm5C_associated_SNPs_5426 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955157 + 174955137 174955177 41 CTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTG CTCCTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAGGTG < 41bp 1 0.64925458597279 1 0.663671135902405 experiment 0.701490828054421 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955157 chr5:174955154 . . 0 18 hm5C_associated_SNPs_5427 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955158 + 174955138 174955178 41 TCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGC TCCTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAGGTGC < 41bp 1 0.724326716783632 1 0.372118592262268 experiment 0.551346566432736 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955158 chr5:174955154 . . 0 17 hm5C_associated_SNPs_5428 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955160 + 174955140 174955180 41 CTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTG CTGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAGGTGCTG < 41bp 1 0.186118880649781 1 0.0499935150146484 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955160 chr5:174955154 . . 0 15 hm5C_associated_SNPs_5429 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955161 + 174955141 174955181 41 TGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGG TGACCTCGTGATCTGCCCGCCTTGGCCTCCCAAGGTGCTGG < 41bp 1 0.509959236676303 1 0.0561020374298096 experiment 0.980081526647393 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955161 chr5:174955154 . . 0 14 hm5C_associated_SNPs_5430 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955166 + 174955146 174955186 41 TCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTA TCGTGATCTGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTA < 41bp 1 0.231723703074195 1 0.218073308467865 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955166 chr5:174955154 . . 0 9 hm5C_associated_SNPs_5431 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955167 + 174955147 174955187 41 CGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTAC CGTGATCTGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTAC < 41bp 1 0.60887195801874 1 0.0726242661476135 experiment 0.782256083962519 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955167 chr5:174955154 . . 0 8 hm5C_associated_SNPs_5432 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955169 + 174955149 174955189 41 TGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAA TGATCTGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAA < 41bp 1 0.597953305629257 1 0.088203638792038 experiment 0.804093388741485 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955169 chr5:174955154 . . 0 6 hm5C_associated_SNPs_5433 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955154 174955154 1 + C T rs533623003 174955170 + 174955150 174955190 41 GATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAG GATCTGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAG < 41bp 1 0.455189244481468 1 0.375869899988174 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955170 chr5:174955154 . . 0 5 hm5C_associated_SNPs_5434 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955156 + 174955136 174955176 41 TCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGT TCTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAGGT < 41bp 1 0.663105353380041 1 0.1991126537323 experiment 0.673789293239919 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955156 chr5:174955155 . . 0 20 hm5C_associated_SNPs_5435 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955157 + 174955137 174955177 41 CTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTG CTCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAGGTG < 41bp 1 0.634278792627628 1 0.562555134296417 experiment 0.731442414744743 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955157 chr5:174955155 . . 0 19 hm5C_associated_SNPs_5436 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955158 + 174955138 174955178 41 TCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGC TCCTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAGGTGC < 41bp 1 0.741405922668667 1 0.440403133630753 experiment 0.517188154662666 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955158 chr5:174955155 . . 0 18 hm5C_associated_SNPs_5437 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955160 + 174955140 174955180 41 CTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTG CTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAGGTGCTG < 41bp 1 0.17724640669657 1 0.0437311232089996 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955160 chr5:174955155 . . 0 16 hm5C_associated_SNPs_5438 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955161 + 174955141 174955181 41 TGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGG TGACCTCGTGATCCACCCGCCTTGGCCTCCCAAGGTGCTGG < 41bp 1 0.518859304876336 1 0.0493970811367035 experiment 0.962281390247328 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955161 chr5:174955155 . . 0 15 hm5C_associated_SNPs_5439 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955166 + 174955146 174955186 41 TCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTA TCGTGATCCACCCGCCTTGGCCTCCCAAGGTGCTGGGATTA < 41bp 1 0.212302580705542 1 0.185965865850449 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955166 chr5:174955155 . . 0 10 hm5C_associated_SNPs_5440 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955167 + 174955147 174955187 41 CGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTAC CGTGATCCACCCGCCTTGGCCTCCCAAGGTGCTGGGATTAC < 41bp 1 0.541245063578968 1 0.0579765439033508 experiment 0.917509872842063 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955167 chr5:174955155 . . 0 9 hm5C_associated_SNPs_5441 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955169 + 174955149 174955189 41 TGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAA TGATCCACCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAA < 41bp 1 0.637192684605525 1 0.0832319557666779 experiment 0.725614630788949 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955169 chr5:174955155 . . 0 7 hm5C_associated_SNPs_5442 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955155 174955155 1 + G A rs145597256 174955170 + 174955150 174955190 41 GATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAG GATCCACCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAG < 41bp 1 0.46229133217827 1 0.455670028924942 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955170 chr5:174955155 . . 0 6 hm5C_associated_SNPs_5443 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955156 + 174955136 174955176 41 TCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGT TCTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGT < 41bp 1 0.628142511951822 1 0.253180682659149 experiment 0.743714976096357 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955156 chr5:174955174 . . 0 39 hm5C_associated_SNPs_5444 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955157 + 174955137 174955177 41 CTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTG CTCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTG < 41bp 1 0.566738301339033 1 0.351647645235062 experiment 0.866523397321933 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955157 chr5:174955174 . . 0 38 hm5C_associated_SNPs_5445 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955158 + 174955138 174955178 41 TCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGC TCCTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGC < 41bp 1 0.664250930059662 1 0.330563127994537 experiment 0.671498139880676 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955158 chr5:174955174 . . 0 37 hm5C_associated_SNPs_5446 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955160 + 174955140 174955180 41 CTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTG CTGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTG < 41bp 1 0.18191523544402 1 0.0615979135036469 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955160 chr5:174955174 . . 0 35 hm5C_associated_SNPs_5447 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955161 + 174955141 174955181 41 TGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGG TGACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGG < 41bp 1 0.512216566799567 1 0.105557829141617 experiment 0.975566866400866 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955161 chr5:174955174 . . 0 34 hm5C_associated_SNPs_5448 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955166 + 174955146 174955186 41 TCGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTA TCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTA < 41bp 1 0.219128803444582 1 0.175916939973831 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955166 chr5:174955174 . . 0 29 hm5C_associated_SNPs_5449 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955167 + 174955147 174955187 41 CGTGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTAC CGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTAC < 41bp 1 0.562839508329663 1 0.151089519262314 experiment 0.874320983340674 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955167 chr5:174955174 . . 0 28 hm5C_associated_SNPs_5450 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955169 + 174955149 174955189 41 TGATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAA TGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAA < 41bp 1 0.55613745996458 1 0.171595811843872 experiment 0.88772508007084 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955169 chr5:174955174 . . 0 26 hm5C_associated_SNPs_5451 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955170 + 174955150 174955190 41 GATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAG GATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAAG < 41bp 1 0.565237653578562 1 0.239259958267212 experiment 0.869524692842876 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955170 chr5:174955174 . . 0 25 hm5C_associated_SNPs_5452 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955174 174955174 1 + G A rs273080 174955171 + 174955151 174955191 41 ATCCGCCCGCCTTGGCCTCCCAAGGTGCTGGGATTACAAGC ATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAAGC < 41bp 1 0.684103982881052 1 0.415297597646713 experiment 0.631792034237896 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955171 chr5:174955174 . . 0 24 hm5C_associated_SNPs_5453 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:174955142-174955189
64251 chr5 174955204 174955204 1 + A G rs142635694 174955197 + 174955177 174955217 41 GCTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAA GCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAAA < 41bp 1 0.498096365066933 1 0.0894395709037781 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955197 chr5:174955204 . . 0 28 hm5C_associated_SNPs_5454 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955198 + 174955178 174955218 41 CTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAAT CTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAAAT < 41bp 1 0.714253690105047 1 0.716341853141785 experiment 0.571492619789905 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955198 chr5:174955204 . . 0 27 hm5C_associated_SNPs_5455 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955200 + 174955180 174955220 41 GGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATAT GGGATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAAATAT < 41bp 1 0.485705599562606 1 0.322129905223846 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955200 chr5:174955204 . . 0 25 hm5C_associated_SNPs_5456 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955201 + 174955181 174955221 41 GGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATT GGATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAAATATT < 41bp 1 0.538725778987757 1 0.289256691932678 experiment 0.922548442024486 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955201 chr5:174955204 . . 0 24 hm5C_associated_SNPs_5457 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955203 + 174955183 174955223 41 ATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTT ATTACAAGCGTGAGCCACCGCGCCCGGCCTGAAAATATTTT < 41bp 1 0.504264705540116 1 0.267409086227417 experiment 0.991470588919767 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955203 chr5:174955204 . . 0 22 hm5C_associated_SNPs_5458 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955205 + 174955185 174955225 41 TACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCT TACAAGCGTGAGCCACCGCGCCCGGCCTGAAAATATTTTCT < 41bp 1 0.438322518231597 1 0.276776880025864 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955205 chr5:174955204 . . 0 20 hm5C_associated_SNPs_5459 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955206 + 174955186 174955226 41 ACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTA ACAAGCGTGAGCCACCGCGCCCGGCCTGAAAATATTTTCTA < 41bp 1 0.438691700996778 1 0.19255205988884 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955206 chr5:174955204 . . 0 19 hm5C_associated_SNPs_5460 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955207 + 174955187 174955227 41 CAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAA CAAGCGTGAGCCACCGCGCCCGGCCTGAAAATATTTTCTAA < 41bp 1 0.558373053097693 1 0.392219305038452 experiment 0.883253893804614 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955207 chr5:174955204 . . 0 18 hm5C_associated_SNPs_5461 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955210 + 174955190 174955230 41 GCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAA GCGTGAGCCACCGCGCCCGGCCTGAAAATATTTTCTAAAAA < 41bp 1 0.406105120359548 1 0.0561220645904541 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955210 chr5:174955204 . . 0 15 hm5C_associated_SNPs_5462 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955204 174955204 1 + A G rs142635694 174955211 + 174955191 174955231 41 CGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAAG CGTGAGCCACCGCGCCCGGCCTGAAAATATTTTCTAAAAAG < 41bp 1 0.571615047740877 1 0.256905943155289 experiment 0.856769904518246 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955211 chr5:174955204 . . 0 14 hm5C_associated_SNPs_5463 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955197 + 174955177 174955217 41 GCTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAA GCTGGGATTACAAGCGTGAGCCACCGCACCAGGCCTGAAAA < 41bp 1 0.505516637591944 1 0.121363371610641 experiment 0.988966724816112 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955197 chr5:174955207 . . 0 31 hm5C_associated_SNPs_5464 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955198 + 174955178 174955218 41 CTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAAT CTGGGATTACAAGCGTGAGCCACCGCACCAGGCCTGAAAAT < 41bp 1 0.71138142545131 1 0.698907375335693 experiment 0.577237149097379 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955198 chr5:174955207 . . 0 30 hm5C_associated_SNPs_5465 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955200 + 174955180 174955220 41 GGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATAT GGGATTACAAGCGTGAGCCACCGCACCAGGCCTGAAAATAT < 41bp 1 0.594688052342246 1 0.316779613494873 experiment 0.810623895315509 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955200 chr5:174955207 . . 0 28 hm5C_associated_SNPs_5466 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955201 + 174955181 174955221 41 GGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATT GGATTACAAGCGTGAGCCACCGCACCAGGCCTGAAAATATT < 41bp 1 0.355363810652105 1 0.227564960718155 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955201 chr5:174955207 . . 0 27 hm5C_associated_SNPs_5467 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955205 + 174955185 174955225 41 TACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCT TACAAGCGTGAGCCACCGCACCAGGCCTGAAAATATTTTCT < 41bp 1 0.408228510391957 1 0.531280934810638 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955205 chr5:174955207 . . 0 23 hm5C_associated_SNPs_5468 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955206 + 174955186 174955226 41 ACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTA ACAAGCGTGAGCCACCGCACCAGGCCTGAAAATATTTTCTA < 41bp 1 0.735001807728697 1 0.581249833106995 experiment 0.529996384542605 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955206 chr5:174955207 . . 0 22 hm5C_associated_SNPs_5469 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955210 + 174955190 174955230 41 GCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAA GCGTGAGCCACCGCACCAGGCCTGAAAATATTTTCTAAAAA < 41bp 1 0.475822194548893 1 0.07100909948349 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955210 chr5:174955207 . . 0 18 hm5C_associated_SNPs_5470 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955207 174955207 1 + C A rs560486726 174955211 + 174955191 174955231 41 CGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAAG CGTGAGCCACCGCACCAGGCCTGAAAATATTTTCTAAAAAG < 41bp 1 0.576032145407972 1 0.207247376441956 experiment 0.847935709184056 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955211 chr5:174955207 . . 0 17 hm5C_associated_SNPs_5471 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955197 + 174955177 174955217 41 GCTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAA GCTGGGATTACAAGCGTGAGCCACCGCACCCAGCCTGAAAA < 41bp 1 0.465045353490536 1 0.0445707738399506 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955197 chr5:174955208 . . 0 32 hm5C_associated_SNPs_5472 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955198 + 174955178 174955218 41 CTGGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAAT CTGGGATTACAAGCGTGAGCCACCGCACCCAGCCTGAAAAT < 41bp 1 0.764257843014129 1 0.664969086647034 experiment 0.471484313971742 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955198 chr5:174955208 . . 0 31 hm5C_associated_SNPs_5473 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955200 + 174955180 174955220 41 GGGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATAT GGGATTACAAGCGTGAGCCACCGCACCCAGCCTGAAAATAT < 41bp 1 0.57405988871275 1 0.138337939977646 experiment 0.8518802225745 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955200 chr5:174955208 . . 0 29 hm5C_associated_SNPs_5474 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955201 + 174955181 174955221 41 GGATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATT GGATTACAAGCGTGAGCCACCGCACCCAGCCTGAAAATATT < 41bp 1 0.303612407705438 1 0.133660644292831 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955201 chr5:174955208 . . 0 28 hm5C_associated_SNPs_5475 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955203 + 174955183 174955223 41 ATTACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTT ATTACAAGCGTGAGCCACCGCACCCAGCCTGAAAATATTTT < 41bp 1 0.426152923799633 1 0.0677065253257751 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955203 chr5:174955208 . . 0 26 hm5C_associated_SNPs_5476 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955205 + 174955185 174955225 41 TACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCT TACAAGCGTGAGCCACCGCACCCAGCCTGAAAATATTTTCT < 41bp 1 0.241882703139671 1 0.203181236982346 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955205 chr5:174955208 . . 0 24 hm5C_associated_SNPs_5477 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955206 + 174955186 174955226 41 ACAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTA ACAAGCGTGAGCCACCGCACCCAGCCTGAAAATATTTTCTA < 41bp 1 0.383877563879203 1 0.279037714004517 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955206 chr5:174955208 . . 0 23 hm5C_associated_SNPs_5478 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955207 + 174955187 174955227 41 CAAGCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAA CAAGCGTGAGCCACCGCACCCAGCCTGAAAATATTTTCTAA < 41bp 1 0.606601048517374 1 0.65020626783371 experiment 0.786797902965252 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955207 chr5:174955208 . . 0 22 hm5C_associated_SNPs_5479 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955210 + 174955190 174955230 41 GCGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAA GCGTGAGCCACCGCACCCAGCCTGAAAATATTTTCTAAAAA < 41bp 1 0.458759439858721 1 0.134539693593979 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955210 chr5:174955208 . . 0 19 hm5C_associated_SNPs_5480 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 174955208 174955208 1 + G A rs273079 174955211 + 174955191 174955231 41 CGTGAGCCACCGCACCCGGCCTGAAAATATTTTCTAAAAAG CGTGAGCCACCGCACCCAGCCTGAAAATATTTTCTAAAAAG < 41bp 1 0.607991836399964 1 0.479783356189728 experiment 0.784016327200072 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955211 chr5:174955208 . . 0 18 hm5C_associated_SNPs_5481 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174955190-174955225
64251 chr5 175815874 175815874 1 + T C rs1060588 175815854 + 175815834 175815874 41 GCCCTGTGATTCCGGAGGTCCCCTTTGAACCATCGAAGCCT GCCCTGTGATTCCGGAGGTCCCCTTTGAACCATCGAAGCCC < 41bp 1 0.183127292953305 1 0.0216695070266724 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HIGD2A ENSG00000146066 CDS Human protein_coding chr5:175815854 chr5:175815874 synonymous SNV . 0 41 hm5C_associated_SNPs_5482 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:175815758-175815925
64251 chr5 176085168 176085168 1 + A G rs748743 176085169 + 176085149 176085189 41 AGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCCTG AGTCAAGTTCAGCATCTTCGCCGTGGCTGCAGAGCTGCCTG < 41bp 1 0.643504229612333 1 0.834322333335876 experiment 0.712991540775334 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085169 chr5:176085168 . . 0 20 hm5C_associated_SNPs_5483 0 0 3 DROSHA POSTAR2 ENCODE chr5:176085113-176085224
64251 chr5 176085171 176085171 1 + G A rs146039549 176085169 + 176085149 176085189 41 AGTCAAGTTCAGCATCTTCACCGTGGCTGCAGAGCTGCCTG AGTCAAGTTCAGCATCTTCACCATGGCTGCAGAGCTGCCTG < 41bp 1 0.510653080395821 1 0.725547909736633 experiment 0.978693839208359 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085169 chr5:176085171 . . 0 23 hm5C_associated_SNPs_5484 0 0 2 DROSHA POSTAR2 ENCODE chr5:176085113-176085224
64251 chr5 176085282 176085282 1 + G A rs73332199 176085281 + 176085261 176085301 41 AGCCTGTGCCTGCCTACTAGCGCTCTGGGGTTCGGAGAGTT AGCCTGTGCCTGCCTACTAGCACTCTGGGGTTCGGAGAGTT < 41bp 1 0.190959309517946 1 0.034780740737915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085281 chr5:176085282 . . 0 22 hm5C_associated_SNPs_5485 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:176085260-176085300
64251 chr5 176522675 176522675 1 + C T rs34138361 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTTCT < 41bp 1 0.0409313457873247 1 0.151924073696136 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522675 nonsynonymous SNV 0.985 5 39 hm5C_associated_SNPs_5486 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr5 176721119 176721119 1 + G A rs35848863 176721103 + 176721083 176721123 41 GCAATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTCAG GCAATCAACAGGAATGGCTGCTCAGGCACCCAAAATATCAG < 41bp 1 0.164823780597714 1 0.0818540155887604 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721103 chr5:176721119 nonsynonymous SNV 0.671 1 37 hm5C_associated_SNPs_5487 4 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176721114-176721207
64251 chr5 176722005 176722005 1 + G A rs78247455 176722024 + 176722004 176722044 41 GGCCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG GACCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG < 41bp 1 0.115480277649461 1 0.0649799108505249 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176722024 chr5:176722005 nonsynonymous SNV 0.996 2 2 hm5C_associated_SNPs_5488 4 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:176721960-176722040
64251 chr5 176733907 176733907 1 + T C rs185277044 176733904 + 176733884 176733924 41 TTTTGTTCTCTGATGTGTCTCAGTATCTAGCACATAATAGA TTTTGTTCTCTGATGTGTCTCAGCATCTAGCACATAATAGA < 41bp 1 0.675400965330433 1 0.342762231826782 experiment 0.649198069339134 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MXD3;PRELID1 ENSG00000169230;ENSG00000213347 UTR3 Human other chr5:176733904 chr5:176733907 . . 0 24 hm5C_associated_SNPs_5489 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176733735-176733907
64251 chr5 177558290 177558290 1 + G A rs115379028 177558281 + 177558261 177558301 41 GGAGTCCCAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAG GGAGTCCCAGACTCATAGGTCCCGGCCCAACCCCCGAAGAG < 41bp 1 0.51379835412139 1 0.481580168008804 experiment 0.972403291757219 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558281 chr5:177558290 . . 0 30 hm5C_associated_SNPs_5494 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177558290 177558290 1 + G A rs115379028 177558282 + 177558262 177558302 41 GAGTCCCAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGC GAGTCCCAGACTCATAGGTCCCGGCCCAACCCCCGAAGAGC < 41bp 1 0.219449900284774 1 0.146189004182816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558282 chr5:177558290 . . 0 29 hm5C_associated_SNPs_5495 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177558290 177558290 1 + G A rs115379028 177558283 + 177558263 177558303 41 AGTCCCAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCC AGTCCCAGACTCATAGGTCCCGGCCCAACCCCCGAAGAGCC < 41bp 1 0.55675344932015 1 0.490714281797409 experiment 0.8864931013597 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558283 chr5:177558290 . . 0 28 hm5C_associated_SNPs_5496 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177558290 177558290 1 + G A rs115379028 177558286 + 177558266 177558306 41 CCCAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCGCC CCCAGACTCATAGGTCCCGGCCCAACCCCCGAAGAGCCGCC < 41bp 1 0.255924692188286 1 0.254406720399857 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558286 chr5:177558290 . . 0 25 hm5C_associated_SNPs_5497 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177558290 177558290 1 + G A rs115379028 177558287 + 177558267 177558307 41 CCAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCGCCT CCAGACTCATAGGTCCCGGCCCAACCCCCGAAGAGCCGCCT < 41bp 1 0.0604381244030737 1 0.0663478970527649 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558287 chr5:177558290 . . 0 24 hm5C_associated_SNPs_5498 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177558290 177558290 1 + G A rs115379028 177558288 + 177558268 177558308 41 CAGACTCATAGGTCCCGGCCCAGCCCCCGAAGAGCCGCCTC CAGACTCATAGGTCCCGGCCCAACCCCCGAAGAGCCGCCTC < 41bp 1 0.278261747247601 1 0.0467808544635773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RMND5B ENSG00000145916 UTR5 Human protein_coding chr5:177558288 chr5:177558290 . . 0 23 hm5C_associated_SNPs_5499 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177558275-177558330
64251 chr5 177565228 177565228 1 + G A rs551568824 177565214 + 177565194 177565234 41 GTGAGCGGAGCCTGGAGGAGCTGCTGCACTACGTGGGCCAG GTGAGCGGAGCCTGGAGGAGCTGCTGCACTACGTAGGCCAG < 41bp 1 0.66541720389292 1 0.225342273712158 experiment 0.66916559221416 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5B ENSG00000145916 CDS Human protein_coding chr5:177565214 chr5:177565228 synonymous SNV . 0 35 hm5C_associated_SNPs_5500 0 0 6 BUD13 POSTAR2 ENCODE chr5:177565145-177565290
64251 chr5 177631560 177631560 1 + C G rs146897728 177631545 + 177631525 177631565 41 GGCATTGTCAGGCGGCGGCACCGCGCGGGACGGAGCTTGGC GGCATTGTCAGGCGGCGGCACCGCGCGGGACGGAGGTTGGC < 41bp 1 0.401866664548175 1 0.410072058439255 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HNRNPAB ENSG00000197451 UTR5 Human protein_coding chr5:177631545 chr5:177631560 . . 0 36 hm5C_associated_SNPs_5501 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:177631520-177631600
64251 chr5 177631564 177631564 1 + G C rs370707939 177631545 + 177631525 177631565 41 GGCATTGTCAGGCGGCGGCACCGCGCGGGACGGAGCTTGGC GGCATTGTCAGGCGGCGGCACCGCGCGGGACGGAGCTTGCC < 41bp 1 0.431601597201913 1 0.349711716175079 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HNRNPAB ENSG00000197451 UTR5 Human protein_coding chr5:177631545 chr5:177631564 . . 0 40 hm5C_associated_SNPs_5502 0 0 39 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:177631520-177631600
64251 chr5 179012818 179012818 1 + A G rs376303394 179012813 + 179012793 179012833 41 ACAGCTGCACAGTTGGGGATCTTCAAACCAAGATAGATGGC ACAGCTGCACAGTTGGGGATCTTCAGACCAAGATAGATGGC < 41bp 1 0.299080476893673 1 0.137283325195312 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179012813 chr5:179012818 synonymous SNV . 0 26 hm5C_associated_SNPs_5510 0 0 1 BUD13 POSTAR2 ENCODE chr5:179012808-179012867
64251 chr5 179025789 179025789 1 + G A rs72824522 179025776 + 179025756 179025796 41 ACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGC ACAGCACGAGAAAGACACTTCCTCTCTACTCAGAATGGAGC < 41bp 1 0.0370006210934381 1 0.116391271352768 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179025776 chr5:179025789 synonymous SNV . 0 34 hm5C_associated_SNPs_5511 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:179025780-179025800
64251 chr5 179146757 179146757 1 + C A rs143596594 179146740 + 179146720 179146760 41 AGGCTGGTTAGATGATGAGCCTGAGTACGTACCTGATCCAG AGGCTGGTTAGATGATGAGCCTGAGTACGTACCTGATACAG < 41bp 1 0.672077066530938 1 0.36231255531311 experiment 0.655845866938124 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146740 chr5:179146757 nonsynonymous SNV 0.185 4 38 hm5C_associated_SNPs_5512 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146757 179146757 1 + C A rs143596594 179146752 + 179146732 179146772 41 TGATGAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAAC TGATGAGCCTGAGTACGTACCTGATACAGACGCAGAGAAAC < 41bp 1 0.485220995321519 1 0.130354642868042 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146752 chr5:179146757 nonsynonymous SNV 0.185 4 26 hm5C_associated_SNPs_5513 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146757 179146757 1 + C A rs143596594 179146762 + 179146742 179146782 41 GAGTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTG GAGTACGTACCTGATACAGACGCAGAGAAACCTGAGGATTG < 41bp 1 0.572576918069242 1 0.0532509088516235 experiment 0.854846163861516 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146762 chr5:179146757 nonsynonymous SNV 0.185 4 16 hm5C_associated_SNPs_5514 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146757 179146757 1 + C A rs143596594 179146764 + 179146744 179146784 41 GTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGT GTACGTACCTGATACAGACGCAGAGAAACCTGAGGATTGGT < 41bp 1 0.46274990842438 1 0.284559905529022 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146764 chr5:179146757 nonsynonymous SNV 0.185 4 14 hm5C_associated_SNPs_5515 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146757 179146757 1 + C A rs143596594 179146773 + 179146753 179146793 41 TGATCCAGACGCAGAGAAACCTGAGGATTGGTAAGAACTTC TGATACAGACGCAGAGAAACCTGAGGATTGGTAAGAACTTC < 41bp 1 0.712769323180204 1 0.272528350353241 experiment 0.574461353639592 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179146773 chr5:179146757 nonsynonymous SNV 0.185 4 5 hm5C_associated_SNPs_5516 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179151758 179151758 1 + A G rs75423033 179151747 + 179151727 179151767 41 GAGAAGGAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGGA GAGAAGGAAGAGGAAAAGGACAAGGGAGATGGGGAGGAGGA < 41bp 1 0.780217411037814 1 0.548976004123688 experiment 0.439565177924372 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151747 chr5:179151758 nonsynonymous SNV 0.969 0 32 hm5C_associated_SNPs_5517 0 0 59 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:179151700-179151760
64251 chr5 179151776 179151776 1 + A G rs143348712 179151781 + 179151761 179151801 41 AGGAGGAAGGAGAAGAGAAACTTGGTAAGAAACAGAGTCCA AGGAGGAAGGAGAAGGGAAACTTGGTAAGAAACAGAGTCCA < 41bp 1 0.723187385673848 1 0.310210049152374 experiment 0.553625228652303 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151781 chr5:179151776 nonsynonymous SNV 0.893 0 16 hm5C_associated_SNPs_5518 0 0 29 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:179151707-179151777
64251 chr5 179153686 179153686 1 + A G rs111809764 179153689 + 179153669 179153709 41 CTTCTGTCTTAGAAGAGAAACAGAAAAGTGATGCTGAAGAA CTTCTGTCTTAGAAGAGGAACAGAAAAGTGATGCTGAAGAA < 41bp 1 0.551472454075919 1 0.406494617462158 experiment 0.897055091848163 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179153689 chr5:179153686 nonsynonymous SNV 1.000 0 18 hm5C_associated_SNPs_5519 0 0 36 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179153680-179153700
64251 chr5 179153686 179153686 1 + A G rs111809764 179153702 + 179153682 179153722 41 AGAGAAACAGAAAAGTGATGCTGAAGAAGATGGTGGCACTG AGAGGAACAGAAAAGTGATGCTGAAGAAGATGGTGGCACTG < 41bp 1 0.72902461437307 1 0.403119564056396 experiment 0.54195077125386 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179153702 chr5:179153686 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_5520 0 0 36 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179153680-179153700
64251 chr5 179159870 179159870 1 + G A rs529692246 179159860 + 179159840 179159880 41 TTTTAAGATGGCGGCCGCGGCGGTAGCGCGGAAAACAATGG TTTTAAGATGGCGGCCGCGGCGGTAGCGCGAAAAACAATGG < 41bp 1 0.552831749761173 1 0.522081255912781 experiment 0.894336500477653 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAML1 ENSG00000161021 UTR5 Human protein_coding chr5:179159860 chr5:179159870 . . 0 31 hm5C_associated_SNPs_5521 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:179159840-179159871
64251 chr5 179238583 179238583 1 + G A rs568252008 179238580 + 179238560 179238600 41 CTCACTCTTCAAAGTGTCTGCGAGATTAATCTCTCATGGCC CTCACTCTTCAAAGTGTCTGCGAAATTAATCTCTCATGGCC < 41bp 1 0.228198264938144 1 0.425259351730347 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179238580 chr5:179238583 . . 0 24 hm5C_associated_SNPs_5523 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585670 chr5:179238583-179238601
64251 chr5 179247902 179247902 1 + G A rs189132632 179247909 + 179247889 179247929 41 GGCGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCC GGCGGCTGCGACCAGGACGGCCCGTTTTCCGCCAGCTCGCC < 41bp 1 0.364914284554715 1 0.0816205441951752 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247909 chr5:179247902 . . 0 14 hm5C_associated_SNPs_5524 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179247902 179247902 1 + G A rs189132632 179247910 + 179247890 179247930 41 GCGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCCG GCGGCTGCGACCAGGACGGCCCGTTTTCCGCCAGCTCGCCG < 41bp 1 0.137399239182025 1 0.0403168201446533 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247910 chr5:179247902 . . 0 13 hm5C_associated_SNPs_5525 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179247902 179247902 1 + G A rs189132632 179247911 + 179247891 179247931 41 CGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCCGC CGGCTGCGACCAGGACGGCCCGTTTTCCGCCAGCTCGCCGC < 41bp 1 0.205706095858273 1 0.0194246172904968 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247911 chr5:179247902 . . 0 12 hm5C_associated_SNPs_5526 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179247912 179247912 1 + G A rs74523483 179247909 + 179247889 179247929 41 GGCGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCC GGCGGCTGCGACCGGGACGGCCCATTTTCCGCCAGCTCGCC < 41bp 1 0.214427524831543 1 0.116670548915863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247909 chr5:179247912 . . 0 24 hm5C_associated_SNPs_5527 1 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179247912 179247912 1 + G A rs74523483 179247910 + 179247890 179247930 41 GCGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCCG GCGGCTGCGACCGGGACGGCCCATTTTCCGCCAGCTCGCCG < 41bp 1 0.103648601040403 1 0.0269309878349304 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247910 chr5:179247912 . . 0 23 hm5C_associated_SNPs_5528 1 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179247912 179247912 1 + G A rs74523483 179247911 + 179247891 179247931 41 CGGCTGCGACCGGGACGGCCCGTTTTCCGCCAGCTCGCCGC CGGCTGCGACCGGGACGGCCCATTTTCCGCCAGCTCGCCGC < 41bp 1 0.200087513453001 1 0.0173423886299133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SQSTM1 ENSG00000161011 UTR5 Human protein_coding chr5:179247911 chr5:179247912 . . 0 22 hm5C_associated_SNPs_5529 1 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:179247900-179247920
64251 chr5 179264132 179264132 1 + T G rs1060271 179264121 + 179264101 179264141 41 AATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACC AATGTTGGTTTCACTGAGAGCTGCCTCCTGGGCTCTTCACC < 41bp 1 0.179995349945269 1 0.0541068315505981 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SQSTM1 ENSG00000161010;ENSG00000161011 UTR3 Human other chr5:179264121 chr5:179264132 . . 0 32 hm5C_associated_SNPs_5530 1 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179264100-179264160
64251 chr5 179921563 179921563 1 + G A rs534699441 179921546 + 179921526 179921566 41 GGGCCGAGAGGGCGGGAGGGCGTAGTGGCGGCCCGTCGGGG GGGCCGAGAGGGCGGGAGGGCGTAGTGGCGGCCCGTCAGGG < 41bp 1 0.705672069995556 1 0.708781003952026 experiment 0.588655860008888 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNOT6 ENSG00000113300 UTR5 Human protein_coding chr5:179921546 chr5:179921563 . . 0 38 hm5C_associated_SNPs_5531 0 0 14 DDX24 POSTAR2 ENCODE chr5:179921550-179921630
64251 chr5 180591220 180591220 1 + G A rs368882647 180591202 + 180591182 180591222 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCAGA < 41bp 1 0.406403170649904 1 0.169669330120087 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591202 chr5:180591220 . . 0 39 hm5C_associated_SNPs_5532 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591200-180591220
64251 chr5 180591220 180591220 1 + G A rs368882647 180591215 + 180591195 180591235 41 AAAGGTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTAT AAAGGTCCCCGGTTCGAAACCGGGCAGAAACAGAATCTTAT < 41bp 1 0.362575383800589 1 0.604468107223511 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591215 chr5:180591220 . . 0 26 hm5C_associated_SNPs_5533 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591200-180591220
64251 chr5 180591220 180591220 1 + G A rs368882647 180591219 + 180591199 180591239 41 GTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTATGCTT GTCCCCGGTTCGAAACCGGGCAGAAACAGAATCTTATGCTT < 41bp 1 0.444327622153677 1 0.110061496496201 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591219 chr5:180591220 . . 0 22 hm5C_associated_SNPs_5534 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591200-180591220
64251 chr5 180591222 180591222 1 + A G rs545580560 180591202 + 180591182 180591222 41 CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTAACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGG < 41bp 1 0.452002810890649 1 0.259178161621094 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591202 chr5:180591222 . . 0 41 hm5C_associated_SNPs_5535 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591202-180591235
64251 chr5 180591222 180591222 1 + A G rs545580560 180591215 + 180591195 180591235 41 AAAGGTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTAT AAAGGTCCCCGGTTCGAAACCGGGCGGGAACAGAATCTTAT < 41bp 1 0.441061112553767 1 0.633723974227905 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591215 chr5:180591222 . . 0 28 hm5C_associated_SNPs_5536 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591202-180591235
64251 chr5 180591222 180591222 1 + A G rs545580560 180591219 + 180591199 180591239 41 GTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTATGCTT GTCCCCGGTTCGAAACCGGGCGGGAACAGAATCTTATGCTT < 41bp 1 0.722949492520374 1 0.516623020172119 experiment 0.554101014959251 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591219 chr5:180591222 . . 0 24 hm5C_associated_SNPs_5537 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591202-180591235
64251 chr5 180591225 180591225 1 + C T rs576208610 180591215 + 180591195 180591235 41 AAAGGTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTAT AAAGGTCCCCGGTTCGAAACCGGGCGGAAATAGAATCTTAT < 41bp 1 0.370179916327576 1 0.760161817073822 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591215 chr5:180591225 . . 0 31 hm5C_associated_SNPs_5538 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591202-180591235
64251 chr5 180591225 180591225 1 + C T rs576208610 180591219 + 180591199 180591239 41 GTCCCCGGTTCGAAACCGGGCGGAAACAGAATCTTATGCTT GTCCCCGGTTCGAAACCGGGCGGAAATAGAATCTTATGCTT < 41bp 1 0.549906180474342 1 0.425657451152802 experiment 0.900187639051316 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180591219 chr5:180591225 . . 0 27 hm5C_associated_SNPs_5539 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr5:180591202-180591235
64251 chr5 180600671 180600671 1 + T A rs116343629 180600654 + 180600634 180600674 41 CAGGTATCCCATGCAGGTTTCCGTAGTGTAGTGGTTATCAC CAGGTATCCCATGCAGGTTTCCGTAGTGTAGTGGTTAACAC < 41bp 1 0.343746238587244 1 0.110570818185806 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600654 chr5:180600671 . . 0 38 hm5C_associated_SNPs_5540 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600655 + 180600635 180600675 41 AGGTATCCCATGCAGGTTTCCGTAGTGTAGTGGTTATCACG AGGTATCCCATGCAGGTTTCCGTAGTGTAGTGGTTAACACG < 41bp 1 0.229479552047085 1 0.150115311145782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600655 chr5:180600671 . . 0 37 hm5C_associated_SNPs_5541 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600672 + 180600652 180600692 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAA TTCCGTAGTGTAGTGGTTAACACGTTCGCCTCACACGCGAA < 41bp 1 0.705542519935069 1 0.106319725513458 experiment 0.588914960129862 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600672 chr5:180600671 . . 0 20 hm5C_associated_SNPs_5542 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600674 + 180600654 180600694 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG CCGTAGTGTAGTGGTTAACACGTTCGCCTCACACGCGAAAG < 41bp 1 0.146449303653411 1 0.125709593296051 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600674 chr5:180600671 . . 0 18 hm5C_associated_SNPs_5543 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600681 + 180600661 180600701 41 GTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCG GTAGTGGTTAACACGTTCGCCTCACACGCGAAAGGTCCCCG < 41bp 1 0.159051919769359 1 0.225460261106491 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600681 chr5:180600671 . . 0 11 hm5C_associated_SNPs_5544 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600683 + 180600663 180600703 41 AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGT AGTGGTTAACACGTTCGCCTCACACGCGAAAGGTCCCCGGT < 41bp 1 0.281494054518298 1 0.169287443161011 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600683 chr5:180600671 . . 0 9 hm5C_associated_SNPs_5545 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600685 + 180600665 180600705 41 TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC TGGTTAACACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC < 41bp 1 0.579768953232505 1 0.375318616628647 experiment 0.84046209353499 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600685 chr5:180600671 . . 0 7 hm5C_associated_SNPs_5546 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600671 180600671 1 + T A rs116343629 180600689 + 180600669 180600709 41 TATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA TAACACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA < 41bp 1 0.552590190405977 1 0.285468518733978 experiment 0.894819619188046 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600689 chr5:180600671 . . 0 3 hm5C_associated_SNPs_5547 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:180600645-180600671
64251 chr5 180600680 180600680 1 + C T rs551071148 180600672 + 180600652 180600692 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAA TTCCGTAGTGTAGTGGTTATCACGTTCGTCTCACACGCGAA < 41bp 1 0.735014933832039 1 0.217355340719223 experiment 0.529970132335923 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600672 chr5:180600680 . . 0 29 hm5C_associated_SNPs_5548 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600674 + 180600654 180600694 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTCGTCTCACACGCGAAAG < 41bp 1 0.186879717586802 1 0.0725985467433929 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600674 chr5:180600680 . . 0 27 hm5C_associated_SNPs_5549 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600681 + 180600661 180600701 41 GTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGTCTCACACGCGAAAGGTCCCCG < 41bp 1 0.172274158871403 1 0.426842331886292 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600681 chr5:180600680 . . 0 20 hm5C_associated_SNPs_5550 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600683 + 180600663 180600703 41 AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGT AGTGGTTATCACGTTCGTCTCACACGCGAAAGGTCCCCGGT < 41bp 1 0.360769335915252 1 0.199424624443054 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600683 chr5:180600680 . . 0 18 hm5C_associated_SNPs_5551 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600685 + 180600665 180600705 41 TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGTCTCACACGCGAAAGGTCCCCGGTTC < 41bp 1 0.522826608769222 1 0.407348871231079 experiment 0.954346782461555 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600685 chr5:180600680 . . 0 16 hm5C_associated_SNPs_5552 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600689 + 180600669 180600709 41 TATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGTCTCACACGCGAAAGGTCCCCGGTTCGAAA < 41bp 1 0.569982537354909 1 0.40942656993866 experiment 0.860034925290182 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600689 chr5:180600680 . . 0 12 hm5C_associated_SNPs_5553 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600697 + 180600677 180600717 41 TCGCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGTCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG < 41bp 1 0.457304567666064 1 0.146454870700836 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600697 chr5:180600680 . . 0 4 hm5C_associated_SNPs_5554 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600698 + 180600678 180600718 41 CGCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGTCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA < 41bp 1 0.547242296604993 1 0.220034748315811 experiment 0.905515406790014 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600698 chr5:180600680 . . 0 3 hm5C_associated_SNPs_5555 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600699 + 180600679 180600719 41 GCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GTCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA < 41bp 1 0.404402758924317 1 0.161251395940781 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600699 chr5:180600680 . . 0 2 hm5C_associated_SNPs_5556 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600680 180600680 1 + C T rs551071148 180600700 + 180600680 180600720 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA TCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.26868106119999 1 0.0920111835002899 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600700 chr5:180600680 . . 0 1 hm5C_associated_SNPs_5557 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600683 + 180600663 180600703 41 AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGT AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGCT < 41bp 1 0.285607391270343 1 0.178146153688431 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600683 chr5:180600702 . . 0 40 hm5C_associated_SNPs_5558 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600685 + 180600665 180600705 41 TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGCTTC < 41bp 1 0.506500472078003 1 0.439252912998199 experiment 0.986999055843993 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600685 chr5:180600702 . . 0 38 hm5C_associated_SNPs_5559 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600689 + 180600669 180600709 41 TATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTCACACGCGAAAGGTCCCCGCTTCGAAA < 41bp 1 0.629030891955902 1 0.438525974750519 experiment 0.741938216088196 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600689 chr5:180600702 . . 0 34 hm5C_associated_SNPs_5560 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600697 + 180600677 180600717 41 TCGCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGG TCGCCTCACACGCGAAAGGTCCCCGCTTCGAAACCGGGCGG < 41bp 1 0.367849062392915 1 0.117690175771713 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600697 chr5:180600702 . . 0 26 hm5C_associated_SNPs_5561 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600698 + 180600678 180600718 41 CGCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGA CGCCTCACACGCGAAAGGTCCCCGCTTCGAAACCGGGCGGA < 41bp 1 0.213555398382269 1 0.0841213762760162 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600698 chr5:180600702 . . 0 25 hm5C_associated_SNPs_5562 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600699 + 180600679 180600719 41 GCCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAA GCCTCACACGCGAAAGGTCCCCGCTTCGAAACCGGGCGGAA < 41bp 1 0.237954859567272 1 0.0679504871368408 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600699 chr5:180600702 . . 0 24 hm5C_associated_SNPs_5563 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600700 + 180600680 180600720 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTCACACGCGAAAGGTCCCCGCTTCGAAACCGGGCGGAAA < 41bp 1 0.187265966225669 1 0.0444936454296112 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600700 chr5:180600702 . . 0 23 hm5C_associated_SNPs_5564 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600705 + 180600685 180600725 41 CACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCT CACGCGAAAGGTCCCCGCTTCGAAACCGGGCGGAAACACCT < 41bp 1 0.465356430792589 1 0.513351678848267 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600705 chr5:180600702 . . 0 18 hm5C_associated_SNPs_5565 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600710 + 180600690 180600730 41 GAAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCTCCTTC GAAAGGTCCCCGCTTCGAAACCGGGCGGAAACACCTCCTTC < 41bp 1 0.543466541228593 1 0.771967649459839 experiment 0.913066917542815 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600710 chr5:180600702 . . 0 13 hm5C_associated_SNPs_5566 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600711 + 180600691 180600731 41 AAAGGTCCCCGGTTCGAAACCGGGCGGAAACACCTCCTTCT AAAGGTCCCCGCTTCGAAACCGGGCGGAAACACCTCCTTCT < 41bp 1 0.683105116190103 1 0.814606845378876 experiment 0.633789767619794 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600711 chr5:180600702 . . 0 12 hm5C_associated_SNPs_5567 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600715 + 180600695 180600735 41 GTCCCCGGTTCGAAACCGGGCGGAAACACCTCCTTCTGCTT GTCCCCGCTTCGAAACCGGGCGGAAACACCTCCTTCTGCTT < 41bp 1 0.43210758125223 1 0.366351991891861 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600715 chr5:180600702 . . 0 8 hm5C_associated_SNPs_5568 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180600702 180600702 1 + G C rs59711195 180600721 + 180600701 180600741 41 GGTTCGAAACCGGGCGGAAACACCTCCTTCTGCTTTTTACC GCTTCGAAACCGGGCGGAAACACCTCCTTCTGCTTTTTACC < 41bp 1 0.339223644040755 1 0.0911526381969452 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180600721 chr5:180600702 . . 0 2 hm5C_associated_SNPs_5569 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180600680-180600720
64251 chr5 180614705 180614705 1 + G A rs79012589 180614706 + 180614686 180614726 41 ACCCAGCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGC ACCCAGCGGCAAAGAGGTAACGTGGCCGAGCGGTCTAAGGC < 41bp 1 0.628980999050774 1 0.262404203414917 experiment 0.742038001898452 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614706 chr5:180614705 . . 0 20 hm5C_associated_SNPs_5570 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:180614692-180614722
64251 chr5 180614705 180614705 1 + G A rs79012589 180614711 + 180614691 180614731 41 GCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGG GCGGCAAAGAGGTAACGTGGCCGAGCGGTCTAAGGCGCTGG < 41bp 1 0.424273344826046 1 0.338586032390594 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614711 chr5:180614705 . . 0 15 hm5C_associated_SNPs_5571 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:180614692-180614722
64251 chr5 180614705 180614705 1 + G A rs79012589 180614712 + 180614692 180614732 41 CGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGA CGGCAAAGAGGTAACGTGGCCGAGCGGTCTAAGGCGCTGGA < 41bp 1 0.475414698613978 1 0.741789221763611 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614712 chr5:180614705 . . 0 14 hm5C_associated_SNPs_5572 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:180614692-180614722
64251 chr5 180614705 180614705 1 + G A rs79012589 180614716 + 180614696 180614736 41 AAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAA AAAGAGGTAACGTGGCCGAGCGGTCTAAGGCGCTGGATTAA < 41bp 1 0.271752268090272 1 0.709314107894897 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614716 chr5:180614705 . . 0 10 hm5C_associated_SNPs_5573 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:180614692-180614722
64251 chr5 180614705 180614705 1 + G A rs79012589 180614720 + 180614700 180614740 41 AGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT AGGTAACGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT < 41bp 1 0.47637599065932 1 0.513361215591431 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614720 chr5:180614705 . . 0 6 hm5C_associated_SNPs_5574 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:180614692-180614722
64251 chr5 180614724 180614724 1 + G T rs115619959 180614706 + 180614686 180614726 41 ACCCAGCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGC ACCCAGCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAATGC < 41bp 1 0.64436461665467 1 0.269085854291916 experiment 0.71127076669066 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614706 chr5:180614724 . . 0 39 hm5C_associated_SNPs_5575 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614711 + 180614691 180614731 41 GCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGG GCGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAATGCGCTGG < 41bp 1 0.430687957172298 1 0.146865755319595 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614711 chr5:180614724 . . 0 34 hm5C_associated_SNPs_5576 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614712 + 180614692 180614732 41 CGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGA CGGCAAAGAGGTAGCGTGGCCGAGCGGTCTAATGCGCTGGA < 41bp 1 0.566762208222399 1 0.703843235969543 experiment 0.866475583555203 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614712 chr5:180614724 . . 0 33 hm5C_associated_SNPs_5577 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614716 + 180614696 180614736 41 AAAGAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAA AAAGAGGTAGCGTGGCCGAGCGGTCTAATGCGCTGGATTAA < 41bp 1 0.269403053662474 1 0.744948923587799 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614716 chr5:180614724 . . 0 29 hm5C_associated_SNPs_5578 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614720 + 180614700 180614740 41 AGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT AGGTAGCGTGGCCGAGCGGTCTAATGCGCTGGATTAAGGCT < 41bp 1 0.276611790231721 1 0.321369588375092 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614720 chr5:180614724 . . 0 25 hm5C_associated_SNPs_5579 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614726 + 180614706 180614746 41 CGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTC CGTGGCCGAGCGGTCTAATGCGCTGGATTAAGGCTCCAGTC < 41bp 1 0.753142222816634 1 0.475386470556259 experiment 0.493715554366732 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614726 chr5:180614724 . . 0 19 hm5C_associated_SNPs_5580 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614724 180614724 1 + G T rs115619959 180614739 + 180614719 180614759 41 TCTAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGT TCTAATGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGT < 41bp 1 0.797216692006849 1 0.897307813167572 experiment 0.405566615986301 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614739 chr5:180614724 . . 0 6 hm5C_associated_SNPs_5581 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr5:180614693-180614727
64251 chr5 180614739 180614739 1 + C G rs150051789 180614720 + 180614700 180614740 41 AGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT AGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGGT < 41bp 1 0.473758806237377 1 0.485116064548492 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614720 chr5:180614739 . . 0 40 hm5C_associated_SNPs_5582 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614739 180614739 1 + C G rs150051789 180614726 + 180614706 180614746 41 CGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCTCCAGTC CGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGGTCCAGTC < 41bp 1 0.702604973540906 1 0.461641728878021 experiment 0.594790052918189 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614726 chr5:180614739 . . 0 34 hm5C_associated_SNPs_5583 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614739 180614739 1 + C G rs150051789 180614746 + 180614726 180614766 41 CGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCG CGCTGGATTAAGGGTCCAGTCTCTTCGGGGGCGTGGGTTCG < 41bp 1 0.256694893444921 1 0.158353358507156 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614746 chr5:180614739 . . 0 14 hm5C_associated_SNPs_5584 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614739 180614739 1 + C G rs150051789 180614748 + 180614728 180614768 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAA CTGGATTAAGGGTCCAGTCTCTTCGGGGGCGTGGGTTCGAA < 41bp 1 0.446989160889141 1 0.349614322185516 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614748 chr5:180614739 . . 0 12 hm5C_associated_SNPs_5585 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614739 180614739 1 + C G rs150051789 180614757 + 180614737 180614777 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC GGGTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC < 41bp 1 0.772335512895441 1 0.538870275020599 experiment 0.455328974209117 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614757 chr5:180614739 . . 0 3 hm5C_associated_SNPs_5586 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614748 180614748 1 + C G rs571621440 180614746 + 180614726 180614766 41 CGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCG CGCTGGATTAAGGCTCCAGTCTGTTCGGGGGCGTGGGTTCG < 41bp 1 0.313925291622556 1 0.0855984389781952 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614746 chr5:180614748 . . 0 23 hm5C_associated_SNPs_5587 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614748 180614748 1 + C G rs571621440 180614757 + 180614737 180614777 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC GGCTCCAGTCTGTTCGGGGGCGTGGGTTCGAATCCCACCGC < 41bp 1 0.777109061506703 1 0.563529789447784 experiment 0.445781876986594 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614757 chr5:180614748 . . 0 12 hm5C_associated_SNPs_5588 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614770 180614770 1 + C T rs569033796 180614757 + 180614737 180614777 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATTCCACCGC < 41bp 1 0.743491386482711 1 0.524095416069031 experiment 0.513017227034577 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614757 chr5:180614770 . . 0 34 hm5C_associated_SNPs_5589 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614770 180614770 1 + C T rs569033796 180614771 + 180614751 180614791 41 CGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGT CGGGGGCGTGGGTTCGAATTCCACCGCTGCCAGTTTGTGGT < 41bp 1 0.154420521460605 1 0.432666957378387 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614771 chr5:180614770 . . 0 20 hm5C_associated_SNPs_5590 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614770 180614770 1 + C T rs569033796 180614772 + 180614752 180614792 41 GGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGTA GGGGGCGTGGGTTCGAATTCCACCGCTGCCAGTTTGTGGTA < 41bp 1 0.713146481030898 1 0.383098721504211 experiment 0.573707037938204 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614772 chr5:180614770 . . 0 19 hm5C_associated_SNPs_5591 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614770 180614770 1 + C T rs569033796 180614775 + 180614755 180614795 41 GGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGTAGTT GGCGTGGGTTCGAATTCCACCGCTGCCAGTTTGTGGTAGTT < 41bp 1 0.165347759985593 1 0.254794001579285 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614775 chr5:180614770 . . 0 16 hm5C_associated_SNPs_5592 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614775 180614775 1 + C A rs572539960 180614757 + 180614737 180614777 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACAGC < 41bp 1 0.703540783114862 1 0.474933534860611 experiment 0.592918433770277 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614757 chr5:180614775 . . 0 39 hm5C_associated_SNPs_5593 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614775 180614775 1 + C A rs572539960 180614770 + 180614750 180614790 41 TCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGG TCGGGGGCGTGGGTTCGAATCCCACAGCTGCCAGTTTGTGG < 41bp 1 0.141998461041 1 0.154730647802353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614770 chr5:180614775 . . 0 26 hm5C_associated_SNPs_5594 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614775 180614775 1 + C A rs572539960 180614771 + 180614751 180614791 41 CGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGT CGGGGGCGTGGGTTCGAATCCCACAGCTGCCAGTTTGTGGT < 41bp 1 0.430622421815816 1 0.509156227111816 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614771 chr5:180614775 . . 0 25 hm5C_associated_SNPs_5595 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180614775 180614775 1 + C A rs572539960 180614772 + 180614752 180614792 41 GGGGGCGTGGGTTCGAATCCCACCGCTGCCAGTTTGTGGTA GGGGGCGTGGGTTCGAATCCCACAGCTGCCAGTTTGTGGTA < 41bp 1 0.670488199240655 1 0.290841937065125 experiment 0.65902360151869 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OR2V2;LINC01962 ENSG00000182613;ENSG00000248473 intergenic Human other chr5:180614772 chr5:180614775 . . 0 24 hm5C_associated_SNPs_5596 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:180614738-180614796
64251 chr5 180633886 180633886 1 + T A rs150638197 180633878 + 180633858 180633898 41 GAGAGTAGGTGGGGATGTAGCTCAGTGGTAGAGCGCATGCT GAGAGTAGGTGGGGATGTAGCTCAGTGGAAGAGCGCATGCT < 41bp 1 0.703766945728174 1 0.377791106700897 experiment 0.592466108543651 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633878 chr5:180633886 . . 0 29 hm5C_associated_SNPs_5597 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633886 180633886 1 + T A rs150638197 180633880 + 180633860 180633900 41 GAGTAGGTGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTT GAGTAGGTGGGGATGTAGCTCAGTGGAAGAGCGCATGCTTT < 41bp 1 0.65265665694066 1 0.841479182243347 experiment 0.69468668611868 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633880 chr5:180633886 . . 0 27 hm5C_associated_SNPs_5598 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633886 180633886 1 + T A rs150638197 180633891 + 180633871 180633911 41 GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAG GATGTAGCTCAGTGGAAGAGCGCATGCTTTGCATGTATGAG < 41bp 1 0.31469222248528 1 0.119971632957458 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633891 chr5:180633886 . . 0 16 hm5C_associated_SNPs_5599 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633886 180633886 1 + T A rs150638197 180633893 + 180633873 180633913 41 TGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGC TGTAGCTCAGTGGAAGAGCGCATGCTTTGCATGTATGAGGC < 41bp 1 0.309850336151571 1 0.239897131919861 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633893 chr5:180633886 . . 0 14 hm5C_associated_SNPs_5600 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633886 180633886 1 + T A rs150638197 180633897 + 180633877 180633917 41 GCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAGGCCCCG GCTCAGTGGAAGAGCGCATGCTTTGCATGTATGAGGCCCCG < 41bp 1 0.314994945252442 1 0.0271032750606537 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633897 chr5:180633886 . . 0 10 hm5C_associated_SNPs_5601 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633886 180633886 1 + T A rs150638197 180633902 + 180633882 180633922 41 GTGGTAGAGCGCATGCTTTGCATGTATGAGGCCCCGGGTTC GTGGAAGAGCGCATGCTTTGCATGTATGAGGCCCCGGGTTC < 41bp 1 0.546663568746495 1 0.409780621528625 experiment 0.90667286250701 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633902 chr5:180633886 . . 0 5 hm5C_associated_SNPs_5602 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:180633854-180633903
64251 chr5 180633932 180633932 1 + C T rs138838874 180633914 + 180633894 180633934 41 ATGCTTTGCATGTATGAGGCCCCGGGTTCGATCCCCGGCAT ATGCTTTGCATGTATGAGGCCCCGGGTTCGATCCCCGGTAT < 41bp 1 0.532951858381043 1 0.594560086727142 experiment 0.934096283237913 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633914 chr5:180633932 . . 0 39 hm5C_associated_SNPs_5603 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633915 + 180633895 180633935 41 TGCTTTGCATGTATGAGGCCCCGGGTTCGATCCCCGGCATC TGCTTTGCATGTATGAGGCCCCGGGTTCGATCCCCGGTATC < 41bp 1 0.395652041727453 1 0.258678257465363 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633915 chr5:180633932 . . 0 38 hm5C_associated_SNPs_5604 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633922 + 180633902 180633942 41 CATGTATGAGGCCCCGGGTTCGATCCCCGGCATCTCCAGTG CATGTATGAGGCCCCGGGTTCGATCCCCGGTATCTCCAGTG < 41bp 1 0.125765008986251 1 0.213226318359375 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633922 chr5:180633932 . . 0 31 hm5C_associated_SNPs_5605 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633926 + 180633906 180633946 41 TATGAGGCCCCGGGTTCGATCCCCGGCATCTCCAGTGTAGT TATGAGGCCCCGGGTTCGATCCCCGGTATCTCCAGTGTAGT < 41bp 1 0.248774014182515 1 0.071910172700882 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633926 chr5:180633932 . . 0 27 hm5C_associated_SNPs_5606 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633927 + 180633907 180633947 41 ATGAGGCCCCGGGTTCGATCCCCGGCATCTCCAGTGTAGTT ATGAGGCCCCGGGTTCGATCCCCGGTATCTCCAGTGTAGTT < 41bp 1 0.372950892646142 1 0.253485053777695 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633927 chr5:180633932 . . 0 26 hm5C_associated_SNPs_5607 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633928 + 180633908 180633948 41 TGAGGCCCCGGGTTCGATCCCCGGCATCTCCAGTGTAGTTT TGAGGCCCCGGGTTCGATCCCCGGTATCTCCAGTGTAGTTT < 41bp 1 0.346252657305948 1 0.0718247294425964 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633928 chr5:180633932 . . 0 25 hm5C_associated_SNPs_5608 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633929 + 180633909 180633949 41 GAGGCCCCGGGTTCGATCCCCGGCATCTCCAGTGTAGTTTT GAGGCCCCGGGTTCGATCCCCGGTATCTCCAGTGTAGTTTT < 41bp 1 0.463203518882955 1 0.745768785476685 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633929 chr5:180633932 . . 0 24 hm5C_associated_SNPs_5609 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633935 + 180633915 180633955 41 CCGGGTTCGATCCCCGGCATCTCCAGTGTAGTTTTGCACAT CCGGGTTCGATCCCCGGTATCTCCAGTGTAGTTTTGCACAT < 41bp 1 0.758760373569621 1 0.919673264026642 experiment 0.482479252860758 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633935 chr5:180633932 . . 0 18 hm5C_associated_SNPs_5610 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633937 + 180633917 180633957 41 GGGTTCGATCCCCGGCATCTCCAGTGTAGTTTTGCACATTC GGGTTCGATCCCCGGTATCTCCAGTGTAGTTTTGCACATTC < 41bp 1 0.324463290750374 1 0.227269023656845 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633937 chr5:180633932 . . 0 16 hm5C_associated_SNPs_5611 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180633932 180633932 1 + C T rs138838874 180633938 + 180633918 180633958 41 GGTTCGATCCCCGGCATCTCCAGTGTAGTTTTGCACATTCA GGTTCGATCCCCGGTATCTCCAGTGTAGTTTTGCACATTCA < 41bp 1 0.427597965578755 1 0.313256561756134 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514 upstream Human antisense chr5:180633938 chr5:180633932 . . 0 15 hm5C_associated_SNPs_5612 0 0 66 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180633921-180633940
64251 chr5 180634787 180634787 1 + T C rs142528986 180634767 + 180634747 180634787 41 CATCGGGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT CATCGGGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACC < 41bp 1 0.380988836534921 1 0.393009275197983 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634767 chr5:180634787 . . 0 41 hm5C_associated_SNPs_5613 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634771 + 180634751 180634791 41 GGGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GGGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACCCTTA < 41bp 1 0.745485749100667 1 0.478073537349701 experiment 0.509028501798666 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634771 chr5:180634787 . . 0 37 hm5C_associated_SNPs_5614 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634779 + 180634759 180634799 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GGCTAGCTCAGTCGGTAGAGCATGAGACCCTTAATCTCAGG < 41bp 1 0.669108676556594 1 0.316116094589233 experiment 0.661782646886813 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634779 chr5:180634787 . . 0 29 hm5C_associated_SNPs_5615 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634786 + 180634766 180634806 41 TCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG TCAGTCGGTAGAGCATGAGACCCTTAATCTCAGGGTCGTGG < 41bp 1 0.0588683845259298 1 0.0109255611896515 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634786 chr5:180634787 . . 0 22 hm5C_associated_SNPs_5616 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634788 + 180634768 180634808 41 AGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT AGTCGGTAGAGCATGAGACCCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.371010354450151 1 0.176915615797043 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634788 chr5:180634787 . . 0 20 hm5C_associated_SNPs_5617 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634794 + 180634774 180634814 41 TAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC TAGAGCATGAGACCCTTAATCTCAGGGTCGTGGGTTCGAGC < 41bp 1 0.659465646753967 1 0.812954902648926 experiment 0.681068706492067 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634794 chr5:180634787 . . 0 14 hm5C_associated_SNPs_5618 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634787 180634787 1 + T C rs142528986 180634802 + 180634782 180634822 41 GAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTT GAGACCCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTT < 41bp 1 0.584601812625208 1 0.521346390247345 experiment 0.830796374749584 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634802 chr5:180634787 . . 0 6 hm5C_associated_SNPs_5619 0 0 71 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180634747-180634787
64251 chr5 180634819 180634819 1 + C G rs181561952 180634802 + 180634782 180634822 41 GAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTT GAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCAGGTT < 41bp 1 0.564691495479304 1 0.445402354001999 experiment 0.870617009041392 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634802 chr5:180634819 . . 0 38 hm5C_associated_SNPs_5620 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634810 + 180634790 180634830 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCA TAATCTCAGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCA < 41bp 1 0.430991234277562 1 0.345952570438385 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634810 chr5:180634819 . . 0 30 hm5C_associated_SNPs_5621 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634814 + 180634794 180634834 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTG CTCAGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCAACTG < 41bp 1 0.539729431544277 1 0.0980809926986694 experiment 0.920541136911446 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634814 chr5:180634819 . . 0 26 hm5C_associated_SNPs_5622 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634815 + 180634795 180634835 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGG TCAGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCAACTGG < 41bp 1 0.359608764960703 1 0.335418045520782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634815 chr5:180634819 . . 0 25 hm5C_associated_SNPs_5623 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634816 + 180634796 180634836 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGT CAGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCAACTGGT < 41bp 1 0.496490507207708 1 0.363181948661804 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634816 chr5:180634819 . . 0 24 hm5C_associated_SNPs_5624 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634817 + 180634797 180634837 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTC AGGGTCGTGGGTTCGAGCCCCAGGTTGGGCGGCAACTGGTC < 41bp 1 0.592446388975796 1 0.799032330513 experiment 0.815107222048407 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634817 chr5:180634819 . . 0 23 hm5C_associated_SNPs_5625 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634819 180634819 1 + C G rs181561952 180634826 + 180634806 180634846 41 GGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGTTTTAGTC GGTTCGAGCCCCAGGTTGGGCGGCAACTGGTCGTTTTAGTC < 41bp 1 0.70727303882822 1 0.415818393230438 experiment 0.585453922343561 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634826 chr5:180634819 . . 0 14 hm5C_associated_SNPs_5626 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634810 + 180634790 180634830 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCA TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTAGGCGGCA < 41bp 1 0.404872912970184 1 0.540288627147675 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634810 chr5:180634823 . . 0 34 hm5C_associated_SNPs_5627 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634814 + 180634794 180634834 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTG CTCAGGGTCGTGGGTTCGAGCCCCACGTTAGGCGGCAACTG < 41bp 1 0.420428996426866 1 0.0682411789894104 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634814 chr5:180634823 . . 0 30 hm5C_associated_SNPs_5628 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634815 + 180634795 180634835 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGG TCAGGGTCGTGGGTTCGAGCCCCACGTTAGGCGGCAACTGG < 41bp 1 0.124840084428877 1 0.106071144342422 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634815 chr5:180634823 . . 0 29 hm5C_associated_SNPs_5629 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634816 + 180634796 180634836 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGT CAGGGTCGTGGGTTCGAGCCCCACGTTAGGCGGCAACTGGT < 41bp 1 0.281545482556558 1 0.108399510383606 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634816 chr5:180634823 . . 0 28 hm5C_associated_SNPs_5630 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634817 + 180634797 180634837 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTC AGGGTCGTGGGTTCGAGCCCCACGTTAGGCGGCAACTGGTC < 41bp 1 0.485860715023435 1 0.264947712421417 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634817 chr5:180634823 . . 0 27 hm5C_associated_SNPs_5631 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634819 + 180634799 180634839 41 GGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGT GGTCGTGGGTTCGAGCCCCACGTTAGGCGGCAACTGGTCGT < 41bp 1 0.47779391241488 1 0.164081990718842 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634819 chr5:180634823 . . 0 25 hm5C_associated_SNPs_5632 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634823 180634823 1 + G A rs201268980 180634826 + 180634806 180634846 41 GGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGTTTTAGTC GGTTCGAGCCCCACGTTAGGCGGCAACTGGTCGTTTTAGTC < 41bp 1 0.740538616350263 1 0.604956209659576 experiment 0.518922767299474 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634826 chr5:180634823 . . 0 18 hm5C_associated_SNPs_5633 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634810 + 180634790 180634830 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCA TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCAGCA < 41bp 1 0.421253906084136 1 0.362013280391693 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634810 chr5:180634827 . . 0 38 hm5C_associated_SNPs_5634 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634814 + 180634794 180634834 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTG CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCAGCAACTG < 41bp 1 0.400808675797821 1 0.0686741471290588 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634814 chr5:180634827 . . 0 34 hm5C_associated_SNPs_5635 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634815 + 180634795 180634835 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGG TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCAGCAACTGG < 41bp 1 0.142340005005043 1 0.179533213376999 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634815 chr5:180634827 . . 0 33 hm5C_associated_SNPs_5636 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634816 + 180634796 180634836 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGT CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCAGCAACTGGT < 41bp 1 0.287185439375344 1 0.08407062292099 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634816 chr5:180634827 . . 0 32 hm5C_associated_SNPs_5637 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634817 + 180634797 180634837 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTC AGGGTCGTGGGTTCGAGCCCCACGTTGGGCAGCAACTGGTC < 41bp 1 0.522387125011662 1 0.286219835281372 experiment 0.955225749976675 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634817 chr5:180634827 . . 0 31 hm5C_associated_SNPs_5638 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634819 + 180634799 180634839 41 GGTCGTGGGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGT GGTCGTGGGTTCGAGCCCCACGTTGGGCAGCAACTGGTCGT < 41bp 1 0.348216779532363 1 0.217935711145401 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634819 chr5:180634827 . . 0 29 hm5C_associated_SNPs_5639 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr5 180634827 180634827 1 + G A rs73814519 180634826 + 180634806 180634846 41 GGTTCGAGCCCCACGTTGGGCGGCAACTGGTCGTTTTAGTC GGTTCGAGCCCCACGTTGGGCAGCAACTGGTCGTTTTAGTC < 41bp 1 0.614630518986084 1 0.233150690793991 experiment 0.770738962027832 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM7;MIR4638 ENSG00000248514;ENSG00000146063 intergenic Human other chr5:180634826 chr5:180634827 . . 0 22 hm5C_associated_SNPs_5640 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:180634813-180634835
64251 chr6 1313470 1313470 1 + C T rs4435985 1313458 + 1313438 1313478 41 GTGCGCCACAACCTTTCGCTCAACGACTGCTTCGTCAAGGT GTGCGCCACAACCTTTCGCTCAACGACTGCTTTGTCAAGGT < 41bp 1 0.451364105425659 1 0.0942358374595642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313458 chr6:1313470 synonymous SNV . 0 33 hm5C_associated_SNPs_5641 0 0 3 GRWD1 POSTAR2 ENCODE chr6:1313463-1313511
64251 chr6 1313667 1313667 1 + C T rs557104756 1313653 + 1313633 1313673 41 GCCCCGGGCCTCCCCGCCGCCCCGCCGCCCGCGCCCGCCGC GCCCCGGGCCTCCCCGCCGCCCCGCCGCCCGCGCTCGCCGC < 41bp 1 0.536133481799907 1 0.492312222719193 experiment 0.927733036400187 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313653 chr6:1313667 nonsynonymous SNV 0.002 1 35 hm5C_associated_SNPs_5642 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1313667 1313667 1 + C T rs557104756 1313666 + 1313646 1313686 41 CCGCCGCCCCGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCC CCGCCGCCCCGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCC < 41bp 1 0.678631115749631 1 0.201106131076813 experiment 0.642737768500739 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313666 chr6:1313667 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_5643 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1313667 1313667 1 + C T rs557104756 1313671 + 1313651 1313691 41 GCCCCGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCCCGCAT GCCCCGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCCCGCAT < 41bp 1 0.59334124789938 1 0.255413621664047 experiment 0.813317504201239 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313671 chr6:1313667 nonsynonymous SNV 0.002 1 17 hm5C_associated_SNPs_5644 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1313667 1313667 1 + C T rs557104756 1313673 + 1313653 1313693 41 CCCGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCCCGCATGC CCCGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCCCGCATGC < 41bp 1 0.561990419995884 1 0.0831834673881531 experiment 0.876019160008231 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313673 chr6:1313667 nonsynonymous SNV 0.002 1 15 hm5C_associated_SNPs_5645 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1313667 1313667 1 + C T rs557104756 1313674 + 1313654 1313694 41 CCGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCCCGCATGCG CCGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCCCGCATGCG < 41bp 1 0.535414401581325 1 0.264484405517578 experiment 0.929171196837349 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313674 chr6:1313667 nonsynonymous SNV 0.002 1 14 hm5C_associated_SNPs_5646 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1313667 1313667 1 + C T rs557104756 1313675 + 1313655 1313695 41 CGCCGCCCGCGCCCGCCGCCCCGGCCTCGCCCCGCATGCGC CGCCGCCCGCGCTCGCCGCCCCGGCCTCGCCCCGCATGCGC < 41bp 1 0.553664793919916 1 0.217990517616272 experiment 0.892670412160169 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313675 chr6:1313667 nonsynonymous SNV 0.002 1 13 hm5C_associated_SNPs_5647 0 0 2 RBM15 POSTAR2 ENCODE chr6:1313636-1313675
64251 chr6 1611569 1611569 1 + C T rs79691946 1611557 + 1611537 1611577 41 ACGGTGCGGATTCCGCGCCGCCGCCGCCCGCGCCCTCCGCC ACGGTGCGGATTCCGCGCCGCCGCCGCCCGCGTCCTCCGCC < 41bp 1 0.500548338465915 1 0.0995873510837555 experiment 0.998903323068171 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611557 chr6:1611569 nonsynonymous SNV 0.012 1 33 hm5C_associated_SNPs_5650 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611560 + 1611540 1611580 41 GTGCGGATTCCGCGCCGCCGCCGCCCGCGCCCTCCGCCCCG GTGCGGATTCCGCGCCGCCGCCGCCCGCGTCCTCCGCCCCG < 41bp 1 0.591451669199848 1 0.154333651065826 experiment 0.817096661600304 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611560 chr6:1611569 nonsynonymous SNV 0.012 1 30 hm5C_associated_SNPs_5651 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611561 + 1611541 1611581 41 TGCGGATTCCGCGCCGCCGCCGCCCGCGCCCTCCGCCCCGC TGCGGATTCCGCGCCGCCGCCGCCCGCGTCCTCCGCCCCGC < 41bp 1 0.782513681127685 1 0.479841470718384 experiment 0.434972637744629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611561 chr6:1611569 nonsynonymous SNV 0.012 1 29 hm5C_associated_SNPs_5652 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611563 + 1611543 1611583 41 CGGATTCCGCGCCGCCGCCGCCCGCGCCCTCCGCCCCGCCG CGGATTCCGCGCCGCCGCCGCCCGCGTCCTCCGCCCCGCCG < 41bp 1 0.600841028173857 1 0.724738717079163 experiment 0.798317943652286 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611563 chr6:1611569 nonsynonymous SNV 0.012 1 27 hm5C_associated_SNPs_5653 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611567 + 1611547 1611587 41 TTCCGCGCCGCCGCCGCCCGCGCCCTCCGCCCCGCCGCCGC TTCCGCGCCGCCGCCGCCCGCGTCCTCCGCCCCGCCGCCGC < 41bp 1 0.500343383944355 1 0.124660640954971 experiment 0.99931323211129 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611567 chr6:1611569 nonsynonymous SNV 0.012 1 23 hm5C_associated_SNPs_5654 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611573 + 1611553 1611593 41 GCCGCCGCCGCCCGCGCCCTCCGCCCCGCCGCCGCACCATA GCCGCCGCCGCCCGCGTCCTCCGCCCCGCCGCCGCACCATA < 41bp 1 0.42936187365424 1 0.47562563419342 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611573 chr6:1611569 nonsynonymous SNV 0.012 1 17 hm5C_associated_SNPs_5655 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611577 + 1611557 1611597 41 CCGCCGCCCGCGCCCTCCGCCCCGCCGCCGCACCATAGCCA CCGCCGCCCGCGTCCTCCGCCCCGCCGCCGCACCATAGCCA < 41bp 1 0.300226317560999 1 0.0823521316051483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611577 chr6:1611569 nonsynonymous SNV 0.012 1 13 hm5C_associated_SNPs_5656 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 1611569 1611569 1 + C T rs79691946 1611578 + 1611558 1611598 41 CGCCGCCCGCGCCCTCCGCCCCGCCGCCGCACCATAGCCAG CGCCGCCCGCGTCCTCCGCCCCGCCGCCGCACCATAGCCAG < 41bp 1 0.362482545025608 1 0.0586803257465363 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611578 chr6:1611569 nonsynonymous SNV 0.012 1 12 hm5C_associated_SNPs_5657 3 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:1611560-1611580
64251 chr6 3015772 3015772 1 + G A rs146678417 3015789 + 3015769 3015809 41 GCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA GCTATACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA < 41bp 1 0.394627439630788 1 0.129826933145523 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015789 chr6:3015772 synonymous SNV . 0 4 hm5C_associated_SNPs_5658 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr6 3015790 3015790 1 + A G rs1049115 3015789 + 3015769 3015809 41 GCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA GCTGTACTGGTTCAGCGTGCCGGCCATCCTGAAGGGCTGGA < 41bp 1 0.471314040090062 1 0.171331703662872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015789 chr6:3015790 synonymous SNV . 0 22 hm5C_associated_SNPs_5659 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr6 3152760 3152760 1 + T C rs2231370 3152743 + 3152723 3152763 41 CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCG CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTCGCG < 41bp 1 0.136135156427032 1 0.455189645290375 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BPHL ENSG00000137274 CDS Human protein_coding chr6:3152743 chr6:3152760 nonsynonymous SNV 0.971 4 38 hm5C_associated_SNPs_5660 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:3152759-3152760
64251 chr6 3259228 3259228 1 + G C rs555460327 3259245 + 3259225 3259265 41 CTGGCGCTGTGGGCCGGGAGCCGTGGGGCGGCATGGAGGGG CTGCCGCTGTGGGCCGGGAGCCGTGGGGCGGCATGGAGGGG < 41bp 1 0.674861755595519 1 0.395954877138138 experiment 0.650276488808961 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG4 ENSG00000180822 UTR5 Human protein_coding chr6:3259245 chr6:3259228 . . 0 4 hm5C_associated_SNPs_5661 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:3259191-3259228
64251 chr6 5261845 5261845 1 + A C rs2753246 5261846 + 5261826 5261866 41 GAGCGAACGAGCCTGCCGTACTTCTGATTTTGAAACACCTG GAGCGAACGAGCCTGCCGTCCTTCTGATTTTGAAACACCTG < 41bp 1 0.0714362927126098 1 0.0771406292915344 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FARS2 ENSG00000145982 UTR5 Human protein_coding chr6:5261846 chr6:5261845 . . 0 20 hm5C_associated_SNPs_5663 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:5261837-5261853
64251 chr6 7231521 7231521 1 + C T rs148116530 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGAGCTGCCTCCGCTGGCCTCCATTGCCCAGATCATCTC < 41bp 1 0.604849984241402 1 0.955118775367737 experiment 0.790300031517195 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231521 synonymous SNV . 0 12 hm5C_associated_SNPs_5664 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:7231491-7231541
64251 chr6 7231523 7231523 1 + C T rs143874633 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGAGCTGCCCCTGCTGGCCTCCATTGCCCAGATCATCTC < 41bp 1 0.641993194424273 1 0.964523434638977 experiment 0.716013611151454 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231523 nonsynonymous SNV 0.978 4 14 hm5C_associated_SNPs_5665 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:7231491-7231541
64251 chr6 7250754 7250754 1 + A G rs75204207 7250772 + 7250752 7250792 41 TCAGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGG TCGGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGG < 41bp 1 0.238862449924821 1 0.0356840789318085 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RREB1 ENSG00000124782 UTR3 Human protein_coding chr6:7250772 chr6:7250754 . . 0 3 hm5C_associated_SNPs_5666 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:7250719-7250755
64251 chr6 7250754 7250754 1 + A G rs75204207 7250773 + 7250753 7250793 41 CAGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGGG CGGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGGG < 41bp 1 0.0902010644560426 1 0.0779328346252441 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RREB1 ENSG00000124782 UTR3 Human protein_coding chr6:7250773 chr6:7250754 . . 0 2 hm5C_associated_SNPs_5667 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:7250719-7250755
64251 chr6 7250754 7250754 1 + A G rs75204207 7250774 + 7250754 7250794 41 AGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGGGG GGCCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTGGGG < 41bp 1 0.0829162727568724 1 0.0827374160289764 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RREB1 ENSG00000124782 UTR3 Human protein_coding chr6:7250774 chr6:7250754 . . 0 1 hm5C_associated_SNPs_5668 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:7250719-7250755
64251 chr6 7572262 7572262 1 + A G rs2076304 7572244 + 7572224 7572264 41 AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGGTC < 41bp 1 0.0414207772916497 1 0.0501182675361633 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572244 chr6:7572262 synonymous SNV . 0 39 hm5C_associated_SNPs_5669 4 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:7572229-7572280
64251 chr6 7579933 7579933 1 + G A rs28763964 7579952 + 7579932 7579972 41 AGATTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC AAATTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC < 41bp 1 0.184868812155402 1 0.277094721794128 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579952 chr6:7579933 synonymous SNV . 0 2 hm5C_associated_SNPs_5670 8 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7579920-7579940
64251 chr6 7581001 7581001 1 + C A rs28763966 7580985 + 7580965 7581005 41 GCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAAC GCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAAAAAAC < 41bp 1 0.484939662325084 1 0.449101954698563 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7580985 chr6:7581001 nonsynonymous SNV 0.676 0 37 hm5C_associated_SNPs_5671 8 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7580979-7581020
64251 chr6 7581089 7581089 1 + A G rs530647574 7581082 + 7581062 7581102 41 CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCCA CAGGAGAGGACTGTGAAGGACCAGGATGTCACGCGGTTCCA < 41bp 1 0.368257353748041 1 0.275496274232864 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581082 chr6:7581089 nonsynonymous SNV 0.299 0 28 hm5C_associated_SNPs_5672 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581089 7581089 1 + A G rs530647574 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TGAAGGACCAGGATGTCACGCGGTTCCAGAACTCTCTGAAA < 41bp 1 0.162520487479081 1 0.687551856040955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581089 nonsynonymous SNV 0.299 0 15 hm5C_associated_SNPs_5673 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581089 7581089 1 + A G rs530647574 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATGTCACGCGGTTCCAGAACTCTCTGAAAGAGCT < 41bp 1 0.26422402822459 1 0.40388098359108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581089 nonsynonymous SNV 0.299 0 10 hm5C_associated_SNPs_5674 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 13615767 13615767 1 + T C rs75029999 13615758 + 13615738 13615778 41 GAGGAAGACGAGGAAGGGGACGATGAGTTTGACGATGAGGC GAGGAAGACGAGGAAGGGGACGATGAGTTCGACGATGAGGC < 41bp 1 0.567849069438354 1 0.394457340240479 experiment 0.864301861123293 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615758 chr6:13615767 synonymous SNV . 0 30 hm5C_associated_SNPs_5676 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:13615740-13615780
64251 chr6 13616709 13616709 1 + T A rs141864975 13616704 + 13616684 13616724 41 CATTCCAAAAGAAAAGAAAACTCCTTCCAGACACTATTTTG CATTCCAAAAGAAAAGAAAACTCCTACCAGACACTATTTTG < 41bp 1 0.331831852745083 1 0.258209943771362 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13616704 chr6:13616709 synonymous SNV . 0 26 hm5C_associated_SNPs_5677 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:13616708-13616709
64251 chr6 13616712 13616712 1 + A G rs3757262 13616704 + 13616684 13616724 41 CATTCCAAAAGAAAAGAAAACTCCTTCCAGACACTATTTTG CATTCCAAAAGAAAAGAAAACTCCTTCCGGACACTATTTTG < 41bp 1 0.366788756957157 1 0.24390509724617 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13616704 chr6:13616712 synonymous SNV . 0 29 hm5C_associated_SNPs_5678 0 0 4 AGGF1 POSTAR2 ENCODE chr6:13616698-13616758
64251 chr6 14136309 14136309 1 + C T rs1050648 14136311 + 14136291 14136331 41 GTGCAGTCTGGGTGCTCGCCCACTTGTCCCACTATCTGGGT GTGCAGTCTGGGTGCTCGTCCACTTGTCCCACTATCTGGGT < 41bp 1 0.595739218186399 1 0.163758546113968 experiment 0.808521563627202 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD83 ENSG00000112149 UTR3 Human protein_coding chr6:14136311 chr6:14136309 . . 0 19 hm5C_associated_SNPs_5679 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:14136274-14136373
64251 chr6 14136323 14136323 1 + T C rs540735890 14136311 + 14136291 14136331 41 GTGCAGTCTGGGTGCTCGCCCACTTGTCCCACTATCTGGGT GTGCAGTCTGGGTGCTCGCCCACTTGTCCCACCATCTGGGT < 41bp 1 0.605565977597897 1 0.0652211606502533 experiment 0.788868044804206 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD83 ENSG00000112149 UTR3 Human protein_coding chr6:14136311 chr6:14136323 . . 0 33 hm5C_associated_SNPs_5680 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:14136274-14136373
64251 chr6 15487583 15487583 1 + A C rs35990127 15487577 + 15487557 15487597 41 GTCAACACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCA GTCAACACGGGAGAAGGAACCTGTTCCAAAACACAAAAGCA < 41bp 1 0.1015445488863 1 0.329536080360413 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15487577 chr6:15487583 nonsynonymous SNV 0.989 0 27 hm5C_associated_SNPs_5681 0 0 4 U2AF1 POSTAR2 ENCODE chr6:15487530-15487589
64251 chr6 15496742 15496742 1 + A G rs556092630 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCGGCAGCTGCGGGGGGGCCTGCAGCTGCGGGAGGGGCT < 41bp 1 0.0659522195615021 1 0.269796878099442 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496742 nonsynonymous SNV 0.990 2 17 hm5C_associated_SNPs_5682 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr6 19839473 19839473 1 + C T rs9689909 19839459 + 19839439 19839479 41 AGGTGTGCGGCCGCCTGAGCCCGAGCCAGGAGCACTAGAGA AGGTGTGCGGCCGCCTGAGCCCGAGCCAGGAGCATTAGAGA < 41bp 1 0.617936039285445 1 0.703493297100067 experiment 0.764127921429111 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ID4 ENSG00000172201 UTR3 Human protein_coding chr6:19839459 chr6:19839473 . . 0 35 hm5C_associated_SNPs_5684 0 0 8 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr6:19839473-19839494
64251 chr6 19839473 19839473 1 + C T rs9689909 19839464 + 19839444 19839484 41 TGCGGCCGCCTGAGCCCGAGCCAGGAGCACTAGAGAGGGAG TGCGGCCGCCTGAGCCCGAGCCAGGAGCATTAGAGAGGGAG < 41bp 1 0.556838643011981 1 0.707939863204956 experiment 0.886322713976038 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ID4 ENSG00000172201 UTR3 Human protein_coding chr6:19839464 chr6:19839473 . . 0 30 hm5C_associated_SNPs_5685 0 0 8 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr6:19839473-19839494
64251 chr6 19839473 19839473 1 + C T rs9689909 19839471 + 19839451 19839491 41 GCCTGAGCCCGAGCCAGGAGCACTAGAGAGGGAGGGGGAAG GCCTGAGCCCGAGCCAGGAGCATTAGAGAGGGAGGGGGAAG < 41bp 1 0.618567969323527 1 0.136326014995575 experiment 0.762864061352946 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ID4 ENSG00000172201 UTR3 Human protein_coding chr6:19839471 chr6:19839473 . . 0 23 hm5C_associated_SNPs_5686 0 0 8 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr6:19839473-19839494
64251 chr6 20490859 20490859 1 + G T rs182906095 20490854 + 20490834 20490874 41 AAACAAATTGTCTAAACGCACAGTTGCAGGCTCCCTTGGGA AAACAAATTGTCTAAACGCACAGTTTCAGGCTCCCTTGGGA < 41bp 1 0.137836662031302 1 0.0839495062828064 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20490854 chr6:20490859 . . 0 26 hm5C_associated_SNPs_5687 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:20490840-20490880
64251 chr6 20492407 20492407 1 + C G rs4134986 20492416 + 20492396 20492436 41 ACAAAAAACCACAAGAGCCCCAGCCAGTTTACTCCAGGTAG ACAAAAAACCAGAAGAGCCCCAGCCAGTTTACTCCAGGTAG < 41bp 1 0.361872103930296 1 0.118128299713135 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 UTR3 Human protein_coding chr6:20492416 chr6:20492407 . . 0 12 hm5C_associated_SNPs_5690 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:20492365-20492430
64251 chr6 21594637 21594637 1 + C T rs14256 21594646 + 21594626 21594666 41 GAGTTGAGGGGCCAGTTCGGCCGCCGCGCGCGTCTTCCCGT GAGTTGAGGGGTCAGTTCGGCCGCCGCGCGCGTCTTCCCGT < 41bp 1 0.432465304862188 1 0.520168602466583 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX4 ENSG00000124766 UTR5 Human protein_coding chr6:21594646 chr6:21594637 . . 0 12 hm5C_associated_SNPs_5709 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:21594600-21594680
64251 chr6 21594637 21594637 1 + C T rs14256 21594647 + 21594627 21594667 41 AGTTGAGGGGCCAGTTCGGCCGCCGCGCGCGTCTTCCCGTT AGTTGAGGGGTCAGTTCGGCCGCCGCGCGCGTCTTCCCGTT < 41bp 1 0.704987506918646 1 0.801285147666931 experiment 0.590024986162707 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX4 ENSG00000124766 UTR5 Human protein_coding chr6:21594647 chr6:21594637 . . 0 11 hm5C_associated_SNPs_5710 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:21594600-21594680
64251 chr6 21594637 21594637 1 + C T rs14256 21594649 + 21594629 21594669 41 TTGAGGGGCCAGTTCGGCCGCCGCGCGCGTCTTCCCGTTCG TTGAGGGGTCAGTTCGGCCGCCGCGCGCGTCTTCCCGTTCG < 41bp 1 0.599049657903591 1 0.225798785686493 experiment 0.801900684192818 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX4 ENSG00000124766 UTR5 Human protein_coding chr6:21594649 chr6:21594637 . . 0 9 hm5C_associated_SNPs_5711 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:21594600-21594680
64251 chr6 21594637 21594637 1 + C T rs14256 21594650 + 21594630 21594670 41 TGAGGGGCCAGTTCGGCCGCCGCGCGCGTCTTCCCGTTCGG TGAGGGGTCAGTTCGGCCGCCGCGCGCGTCTTCCCGTTCGG < 41bp 1 0.505386552778879 1 0.487275719642639 experiment 0.989226894442242 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX4 ENSG00000124766 UTR5 Human protein_coding chr6:21594650 chr6:21594637 . . 0 8 hm5C_associated_SNPs_5712 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:21594600-21594680
64251 chr6 24423254 24423254 1 + G A rs145494145 24423252 + 24423232 24423272 41 TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCCATTGCCT TGCTTTCATTCCTTGGACGACAACTAGAAGCTCCATTGCCT < 41bp 1 0.352827652814925 1 0.0203087627887726 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423252 chr6:24423254 synonymous SNV . 0 23 hm5C_associated_SNPs_5713 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:24423234-24423265
64251 chr6 26093180 26093180 1 + T C rs143175221 26093171 + 26093151 26093191 41 GCACCCAGGCCTGGATCAGCCCCTCATTGTGATCTGGGGTA GCACCCAGGCCTGGATCAGCCCCTCATTGCGATCTGGGGTA < 41bp 1 0.210760155118509 1 0.0476510524749756 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control HFE ENSG00000010704 CDS Human protein_coding chr6:26093171 chr6:26093180 nonsynonymous SNV 0.003 0 30 hm5C_associated_SNPs_5718 0 0 1 SND1 POSTAR2 ENCODE chr6:26093037-26093187
64251 chr6 26156723 26156723 1 + G A rs146982083 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCATCTG < 41bp 1 0.529803256917045 1 0.137588828802109 experiment 0.940393486165909 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156723 synonymous SNV . 0 37 hm5C_associated_SNPs_5719 0 0 68 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156540-26156740
64251 chr6 26286804 26286804 1 + G A rs574964275 26286785 + 26286765 26286805 41 GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGG GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAG < 41bp 1 0.266384132568879 1 0.0190424621105194 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286785 chr6:26286804 . . 0 40 hm5C_associated_SNPs_5720 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286786 + 26286766 26286806 41 CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGA CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGA < 41bp 1 0.37848540107118 1 0.0418786406517029 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286786 chr6:26286804 . . 0 39 hm5C_associated_SNPs_5721 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286791 + 26286771 26286811 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCGAA < 41bp 1 0.355473706253471 1 0.347440153360367 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286791 chr6:26286804 . . 0 34 hm5C_associated_SNPs_5722 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286792 + 26286772 26286812 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCGAAA < 41bp 1 0.75430017567543 1 0.795068979263306 experiment 0.491399648649139 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286792 chr6:26286804 . . 0 33 hm5C_associated_SNPs_5723 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286800 + 26286780 26286820 41 TGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATAGATCGAAACCATCCTC < 41bp 1 0.591761344058459 1 0.313009083271027 experiment 0.816477311883081 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286800 chr6:26286804 . . 0 25 hm5C_associated_SNPs_5724 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286808 + 26286788 26286828 41 TAACCCAGAGGTCGATGGATCGAAACCATCCTCTGCTAGGT TAACCCAGAGGTCGATAGATCGAAACCATCCTCTGCTAGGT < 41bp 1 0.658587113200248 1 0.710045158863068 experiment 0.682825773599503 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286808 chr6:26286804 . . 0 17 hm5C_associated_SNPs_5725 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286813 + 26286793 26286833 41 CAGAGGTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTT CAGAGGTCGATAGATCGAAACCATCCTCTGCTAGGTCCTTT < 41bp 1 0.0309658073540797 1 0.0699940323829651 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286813 chr6:26286804 . . 0 12 hm5C_associated_SNPs_5726 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286817 + 26286797 26286837 41 GGTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTTTTTT GGTCGATAGATCGAAACCATCCTCTGCTAGGTCCTTTTTTT < 41bp 1 0.0720456897344052 1 0.0253023505210876 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286817 chr6:26286804 . . 0 8 hm5C_associated_SNPs_5727 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286804 26286804 1 + G A rs574964275 26286818 + 26286798 26286838 41 GTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTTTTTTT GTCGATAGATCGAAACCATCCTCTGCTAGGTCCTTTTTTTT < 41bp 1 0.263663226073961 1 0.0349572598934174 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286818 chr6:26286804 . . 0 7 hm5C_associated_SNPs_5728 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286816 26286816 1 + T C rs545756132 26286800 + 26286780 26286820 41 TGGGCCCATAACCCAGAGGTCGATGGATCGAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATGGATCGAAACCACCCTC < 41bp 1 0.523686340265106 1 0.473832100629807 experiment 0.952627319469789 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286800 chr6:26286816 . . 0 37 hm5C_associated_SNPs_5729 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286816 26286816 1 + T C rs545756132 26286808 + 26286788 26286828 41 TAACCCAGAGGTCGATGGATCGAAACCATCCTCTGCTAGGT TAACCCAGAGGTCGATGGATCGAAACCACCCTCTGCTAGGT < 41bp 1 0.629576566807233 1 0.639345049858093 experiment 0.740846866385534 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286808 chr6:26286816 . . 0 29 hm5C_associated_SNPs_5730 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286816 26286816 1 + T C rs545756132 26286813 + 26286793 26286833 41 CAGAGGTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTT CAGAGGTCGATGGATCGAAACCACCCTCTGCTAGGTCCTTT < 41bp 1 0.0863236473116781 1 0.0449624061584473 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286813 chr6:26286816 . . 0 24 hm5C_associated_SNPs_5731 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286816 26286816 1 + T C rs545756132 26286817 + 26286797 26286837 41 GGTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTTTTTT GGTCGATGGATCGAAACCACCCTCTGCTAGGTCCTTTTTTT < 41bp 1 0.067060267827528 1 0.0198504328727722 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286817 chr6:26286816 . . 0 20 hm5C_associated_SNPs_5732 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26286816 26286816 1 + T C rs545756132 26286818 + 26286798 26286838 41 GTCGATGGATCGAAACCATCCTCTGCTAGGTCCTTTTTTTT GTCGATGGATCGAAACCACCCTCTGCTAGGTCCTTTTTTTT < 41bp 1 0.242912626324465 1 0.0244231820106506 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000158406;ENSG00000220875 intergenic Human other chr6:26286818 chr6:26286816 . . 0 19 hm5C_associated_SNPs_5733 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:26286797-26286836
64251 chr6 26323074 26323074 1 + T C rs144639891 26323085 + 26323065 26323105 41 TAAGGCGTCTGACTTCGGATCAGAAGATTGAGGGTTCGAAT TAAGGCGTCCGACTTCGGATCAGAAGATTGAGGGTTCGAAT < 41bp 1 0.571856854597412 1 0.358286082744598 experiment 0.856286290805175 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000220875 upstream Human processed_pseudogene chr6:26323085 chr6:26323074 . . 0 10 hm5C_associated_SNPs_5734 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26323038-26323074
64251 chr6 26323075 26323075 1 + G A rs567314006 26323085 + 26323065 26323105 41 TAAGGCGTCTGACTTCGGATCAGAAGATTGAGGGTTCGAAT TAAGGCGTCTAACTTCGGATCAGAAGATTGAGGGTTCGAAT < 41bp 1 0.56147787522067 1 0.346119731664658 experiment 0.87704424955866 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control HIST1H4H;BTN3A2 ENSG00000220875 upstream Human processed_pseudogene chr6:26323085 chr6:26323075 . . 0 11 hm5C_associated_SNPs_5735 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26323038-26323076
64251 chr6 26327867 26327867 1 + T A rs189870640 26327870 + 26327850 26327890 41 AGAAATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGC AGAAATCCATTGGGGTCACCCCGCGCAGGTTCGAATCCTGC < 41bp 1 0.332132567299184 1 0.473697900772095 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26327870 chr6:26327867 . . 0 18 hm5C_associated_SNPs_5736 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:26327860-26327900
64251 chr6 26327867 26327867 1 + T A rs189870640 26327873 + 26327853 26327893 41 AATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA AATCCATTGGGGTCACCCCGCGCAGGTTCGAATCCTGCCGA < 41bp 1 0.740561965209379 1 0.683012366294861 experiment 0.518876069581243 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26327873 chr6:26327867 . . 0 15 hm5C_associated_SNPs_5737 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:26327860-26327900
64251 chr6 26327867 26327867 1 + T A rs189870640 26327881 + 26327861 26327901 41 GGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACGGCA GGGGTCACCCCGCGCAGGTTCGAATCCTGCCGACTACGGCA < 41bp 1 0.317434377500594 1 0.0777748823165894 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26327881 chr6:26327867 . . 0 7 hm5C_associated_SNPs_5738 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:26327860-26327900
64251 chr6 26328399 26328399 1 + C G rs183582388 26328407 + 26328387 26328427 41 TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT TAACGCGTCTGAGTACGGATCAGAAGATTCCAGGTTCGACT < 41bp 1 0.638599648950462 1 0.301986694335938 experiment 0.722800702099077 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328407 chr6:26328399 . . 0 13 hm5C_associated_SNPs_5739 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26328361-26328399
64251 chr6 26328399 26328399 1 + C G rs183582388 26328416 + 26328396 26328436 41 TGACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG TGAGTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG < 41bp 1 0.677249466102756 1 0.70283031463623 experiment 0.645501067794488 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328416 chr6:26328399 . . 0 4 hm5C_associated_SNPs_5740 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26328361-26328399
64251 chr6 26328399 26328399 1 + C G rs183582388 26328417 + 26328397 26328437 41 GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC GAGTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC < 41bp 1 0.649514651372237 1 0.769293904304504 experiment 0.700970697255525 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328417 chr6:26328399 . . 0 3 hm5C_associated_SNPs_5741 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26328361-26328399
64251 chr6 26328408 26328408 1 + A G rs188520062 26328407 + 26328387 26328427 41 TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT TAACGCGTCTGACTACGGATCGGAAGATTCCAGGTTCGACT < 41bp 1 0.656879023214126 1 0.444835484027863 experiment 0.686241953571748 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328407 chr6:26328408 . . 0 22 hm5C_associated_SNPs_5742 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328408 26328408 1 + A G rs188520062 26328416 + 26328396 26328436 41 TGACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG TGACTACGGATCGGAAGATTCCAGGTTCGACTCCTGGCTGG < 41bp 1 0.750541979822219 1 0.882309973239899 experiment 0.498916040355563 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328416 chr6:26328408 . . 0 13 hm5C_associated_SNPs_5743 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328408 26328408 1 + A G rs188520062 26328417 + 26328397 26328437 41 GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC GACTACGGATCGGAAGATTCCAGGTTCGACTCCTGGCTGGC < 41bp 1 0.705515940403708 1 0.840399384498596 experiment 0.588968119192583 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328417 chr6:26328408 . . 0 12 hm5C_associated_SNPs_5744 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328408 26328408 1 + A G rs188520062 26328423 + 26328403 26328443 41 GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC GGATCGGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC < 41bp 1 0.254752035007301 1 0.132415175437927 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328423 chr6:26328408 . . 0 6 hm5C_associated_SNPs_5745 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328408 26328408 1 + A G rs188520062 26328426 + 26328406 26328446 41 TCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC TCGGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC < 41bp 1 0.269159423038487 1 0.246132135391235 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328426 chr6:26328408 . . 0 3 hm5C_associated_SNPs_5746 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328408 26328408 1 + A G rs188520062 26328428 + 26328408 26328448 41 AGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT GGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT < 41bp 1 0.270690743677288 1 0.184557527303696 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328428 chr6:26328408 . . 0 1 hm5C_associated_SNPs_5747 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328407 + 26328387 26328427 41 TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT TAACGCGTCTGACTACGGATCAGAGGATTCCAGGTTCGACT < 41bp 1 0.510566459969264 1 0.613681614398956 experiment 0.978867080061471 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328407 chr6:26328411 . . 0 25 hm5C_associated_SNPs_5748 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328416 + 26328396 26328436 41 TGACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG TGACTACGGATCAGAGGATTCCAGGTTCGACTCCTGGCTGG < 41bp 1 0.70580406867424 1 0.768981695175171 experiment 0.588391862651519 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328416 chr6:26328411 . . 0 16 hm5C_associated_SNPs_5749 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328417 + 26328397 26328437 41 GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC GACTACGGATCAGAGGATTCCAGGTTCGACTCCTGGCTGGC < 41bp 1 0.659731115144683 1 0.819060206413269 experiment 0.680537769710634 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328417 chr6:26328411 . . 0 15 hm5C_associated_SNPs_5750 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328423 + 26328403 26328443 41 GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC GGATCAGAGGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC < 41bp 1 0.291989647945044 1 0.310588985681534 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328423 chr6:26328411 . . 0 9 hm5C_associated_SNPs_5751 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328426 + 26328406 26328446 41 TCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC TCAGAGGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC < 41bp 1 0.280475343617593 1 0.238478749990463 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328426 chr6:26328411 . . 0 6 hm5C_associated_SNPs_5752 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328428 + 26328408 26328448 41 AGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT AGAGGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT < 41bp 1 0.267398793894897 1 0.276424378156662 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328428 chr6:26328411 . . 0 4 hm5C_associated_SNPs_5753 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328411 26328411 1 + A G rs369244033 26328429 + 26328409 26328449 41 GAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTT GAGGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTT < 41bp 1 0.342760645619373 1 0.0570217072963715 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328429 chr6:26328411 . . 0 3 hm5C_associated_SNPs_5754 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328407 + 26328387 26328427 41 TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT TAACGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACT < 41bp 1 0.535200041653791 1 0.619839370250702 experiment 0.929599916692418 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328407 chr6:26328417 . . 0 31 hm5C_associated_SNPs_5755 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328423 + 26328403 26328443 41 GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC GGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGTTC < 41bp 1 0.233021440671224 1 0.0975182354450226 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328423 chr6:26328417 . . 0 15 hm5C_associated_SNPs_5756 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328426 + 26328406 26328446 41 TCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGAC TCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGTTCGAC < 41bp 1 0.233070646032225 1 0.115635246038437 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328426 chr6:26328417 . . 0 12 hm5C_associated_SNPs_5757 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328428 + 26328408 26328448 41 AGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT AGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGTTCGACTT < 41bp 1 0.262336444002671 1 0.0943317711353302 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328428 chr6:26328417 . . 0 10 hm5C_associated_SNPs_5758 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328429 + 26328409 26328449 41 GAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTT GAAGATTCTAGGTTCGACTCCTGGCTGGCTCGTTCGACTTT < 41bp 1 0.335345733363628 1 0.0307511389255524 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328429 chr6:26328417 . . 0 9 hm5C_associated_SNPs_5759 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328433 + 26328413 26328453 41 ATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTG ATTCTAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTG < 41bp 1 0.371907853960166 1 0.0777685046195984 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328433 chr6:26328417 . . 0 5 hm5C_associated_SNPs_5760 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328417 26328417 1 + C T rs6939540 26328437 + 26328417 26328457 41 CAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTGGAAA TAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTGGAAA < 41bp 1 0.235499385233657 1 0.240140795707703 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328437 chr6:26328417 . . 0 1 hm5C_associated_SNPs_5761 0 0 43 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26328400-26328420
64251 chr6 26328426 26328426 1 + C G rs146762816 26328407 + 26328387 26328427 41 TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGAGT < 41bp 1 0.594058602817877 1 0.39243358373642 experiment 0.811882794364246 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328407 chr6:26328426 . . 0 40 hm5C_associated_SNPs_5762 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328416 + 26328396 26328436 41 TGACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG TGACTACGGATCAGAAGATTCCAGGTTCGAGTCCTGGCTGG < 41bp 1 0.662466855754753 1 0.861488819122314 experiment 0.675066288490494 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328416 chr6:26328426 . . 0 31 hm5C_associated_SNPs_5763 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328417 + 26328397 26328437 41 GACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGC GACTACGGATCAGAAGATTCCAGGTTCGAGTCCTGGCTGGC < 41bp 1 0.641558803317228 1 0.713318109512329 experiment 0.716882393365544 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328417 chr6:26328426 . . 0 30 hm5C_associated_SNPs_5764 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328423 + 26328403 26328443 41 GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTC GGATCAGAAGATTCCAGGTTCGAGTCCTGGCTGGCTCGTTC < 41bp 1 0.423881523956247 1 0.314343184232712 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328423 chr6:26328426 . . 0 24 hm5C_associated_SNPs_5765 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328428 + 26328408 26328448 41 AGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTT AGAAGATTCCAGGTTCGAGTCCTGGCTGGCTCGTTCGACTT < 41bp 1 0.225319065166438 1 0.121646344661713 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328428 chr6:26328426 . . 0 19 hm5C_associated_SNPs_5766 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328429 + 26328409 26328449 41 GAAGATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTT GAAGATTCCAGGTTCGAGTCCTGGCTGGCTCGTTCGACTTT < 41bp 1 0.348206446634466 1 0.0438592135906219 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328429 chr6:26328426 . . 0 18 hm5C_associated_SNPs_5767 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328433 + 26328413 26328453 41 ATTCCAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTG ATTCCAGGTTCGAGTCCTGGCTGGCTCGTTCGACTTTAGTG < 41bp 1 0.441773457482235 1 0.0938341617584229 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328433 chr6:26328426 . . 0 14 hm5C_associated_SNPs_5768 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328437 + 26328417 26328457 41 CAGGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTGGAAA CAGGTTCGAGTCCTGGCTGGCTCGTTCGACTTTAGTGGAAA < 41bp 1 0.262613255428533 1 0.323983073234558 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328437 chr6:26328426 . . 0 10 hm5C_associated_SNPs_5769 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26328426 26328426 1 + C G rs146762816 26328439 + 26328419 26328459 41 GGTTCGACTCCTGGCTGGCTCGTTCGACTTTAGTGGAAACT GGTTCGAGTCCTGGCTGGCTCGTTCGACTTTAGTGGAAACT < 41bp 1 0.0630046491805495 1 0.441581398248672 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HIST1H4H;BTN3A2 ENSG00000220875;ENSG00000252399 intergenic Human other chr6:26328439 chr6:26328426 . . 0 8 hm5C_associated_SNPs_5770 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26328422-26328451
64251 chr6 26521484 26521484 1 + C A rs189360088 26521466 + 26521446 26521486 41 CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCC CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCACC < 41bp 1 0.0550646496654039 1 0.0629796981811523 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521466 chr6:26521484 . . 0 39 hm5C_associated_SNPs_5772 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521470 + 26521450 26521490 41 GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGA GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCACCTGGA < 41bp 1 0.680169935780386 1 0.882558465003967 experiment 0.639660128439229 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521470 chr6:26521484 . . 0 35 hm5C_associated_SNPs_5773 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521475 + 26521455 26521495 41 CTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGT CTAAGGCGCTGCGTTCAGGTCGCAGTCTCACCTGGAGGCGT < 41bp 1 0.688188339723224 1 0.137417197227478 experiment 0.623623320553551 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521475 chr6:26521484 . . 0 30 hm5C_associated_SNPs_5774 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521477 + 26521457 26521497 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGCTGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGG < 41bp 1 0.233687096350497 1 0.146806240081787 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521477 chr6:26521484 . . 0 28 hm5C_associated_SNPs_5775 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521481 + 26521461 26521501 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGCTGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTC < 41bp 1 0.526484886751722 1 0.469691693782806 experiment 0.947030226496557 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521481 chr6:26521484 . . 0 24 hm5C_associated_SNPs_5776 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521485 + 26521465 26521505 41 GCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT GCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTCGAAT < 41bp 1 0.333107558773808 1 0.110544770956039 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521485 chr6:26521484 . . 0 20 hm5C_associated_SNPs_5777 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521493 + 26521473 26521513 41 GTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCC GTCGCAGTCTCACCTGGAGGCGTGGGTTCGAATCCCACTCC < 41bp 1 0.767033628051941 1 0.736799538135529 experiment 0.465932743896117 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521493 chr6:26521484 . . 0 12 hm5C_associated_SNPs_5778 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521484 26521484 1 + C A rs189360088 26521501 + 26521481 26521521 41 CTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACAGTT CTCACCTGGAGGCGTGGGTTCGAATCCCACTCCTGACAGTT < 41bp 1 0.211457539944373 1 0.156642764806747 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521501 chr6:26521484 . . 0 4 hm5C_associated_SNPs_5779 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521470 + 26521450 26521490 41 GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGA GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTAGA < 41bp 1 0.704034652440546 1 0.910436391830444 experiment 0.591930695118909 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521470 chr6:26521488 . . 0 39 hm5C_associated_SNPs_5780 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521475 + 26521455 26521495 41 CTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGT CTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTAGAGGCGT < 41bp 1 0.669276053494288 1 0.217855453491211 experiment 0.661447893011424 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521475 chr6:26521488 . . 0 34 hm5C_associated_SNPs_5781 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521477 + 26521457 26521497 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTAGAGGCGTGG < 41bp 1 0.22774141734159 1 0.177038013935089 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521477 chr6:26521488 . . 0 32 hm5C_associated_SNPs_5782 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521481 + 26521461 26521501 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGCTGCGTTCAGGTCGCAGTCTCCCCTAGAGGCGTGGGTTC < 41bp 1 0.573650836869717 1 0.711203455924988 experiment 0.852698326260567 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521481 chr6:26521488 . . 0 28 hm5C_associated_SNPs_5783 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521484 + 26521464 26521504 41 TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAA TGCGTTCAGGTCGCAGTCTCCCCTAGAGGCGTGGGTTCGAA < 41bp 1 0.42795135042375 1 0.332820177078247 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521484 chr6:26521488 . . 0 25 hm5C_associated_SNPs_5784 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521485 + 26521465 26521505 41 GCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT GCGTTCAGGTCGCAGTCTCCCCTAGAGGCGTGGGTTCGAAT < 41bp 1 0.150008941251867 1 0.199739456176758 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521485 chr6:26521488 . . 0 24 hm5C_associated_SNPs_5785 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521493 + 26521473 26521513 41 GTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTCC GTCGCAGTCTCCCCTAGAGGCGTGGGTTCGAATCCCACTCC < 41bp 1 0.780570978481653 1 0.551467001438141 experiment 0.438858043036693 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521493 chr6:26521488 . . 0 16 hm5C_associated_SNPs_5786 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521501 + 26521481 26521521 41 CTCCCCTGGAGGCGTGGGTTCGAATCCCACTCCTGACAGTT CTCCCCTAGAGGCGTGGGTTCGAATCCCACTCCTGACAGTT < 41bp 1 0.197960691411463 1 0.104737162590027 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521501 chr6:26521488 . . 0 8 hm5C_associated_SNPs_5787 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521506 + 26521486 26521526 41 CTGGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTAC CTAGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTAC < 41bp 1 0.170230642561715 1 0.106198072433472 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521506 chr6:26521488 . . 0 3 hm5C_associated_SNPs_5788 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521507 + 26521487 26521527 41 TGGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTACT TAGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTACT < 41bp 1 0.120258950400515 1 0.122910141944885 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521507 chr6:26521488 . . 0 2 hm5C_associated_SNPs_5789 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26521488 26521488 1 + G A rs192544521 26521508 + 26521488 26521528 41 GGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTACTT AGAGGCGTGGGTTCGAATCCCACTCCTGACAGTTCGTACTT < 41bp 1 0.217895804426163 1 0.0490269958972931 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG11 ENSG00000228223 upstream Human lincRNA chr6:26521508 chr6:26521488 . . 0 1 hm5C_associated_SNPs_5790 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26521472-26521530
64251 chr6 26537730 26537730 1 + C T rs78665123 26537729 + 26537709 26537749 41 CCCCTAAGGTACGCGCAGGGCCAGTGGCGCAATGGATAACG CCCCTAAGGTACGCGCAGGGCTAGTGGCGCAATGGATAACG < 41bp 1 0.535008340819044 1 0.156847268342972 experiment 0.929983318361912 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537729 chr6:26537730 . . 0 22 hm5C_associated_SNPs_5791 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26537700-26537740
64251 chr6 26537730 26537730 1 + C T rs78665123 26537736 + 26537716 26537756 41 GGTACGCGCAGGGCCAGTGGCGCAATGGATAACGCGTCTGA GGTACGCGCAGGGCTAGTGGCGCAATGGATAACGCGTCTGA < 41bp 1 0.793148789990302 1 0.786177754402161 experiment 0.413702420019396 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537736 chr6:26537730 . . 0 15 hm5C_associated_SNPs_5792 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26537700-26537740
64251 chr6 26537732 26537732 1 + G A rs149463913 26537729 + 26537709 26537749 41 CCCCTAAGGTACGCGCAGGGCCAGTGGCGCAATGGATAACG CCCCTAAGGTACGCGCAGGGCCAATGGCGCAATGGATAACG < 41bp 1 0.130487513551946 1 0.0717548727989197 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537729 chr6:26537732 . . 0 24 hm5C_associated_SNPs_5793 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26537700-26537740
64251 chr6 26537746 26537746 1 + A G rs116347594 26537729 + 26537709 26537749 41 CCCCTAAGGTACGCGCAGGGCCAGTGGCGCAATGGATAACG CCCCTAAGGTACGCGCAGGGCCAGTGGCGCAATGGATGACG < 41bp 1 0.312346671451025 1 0.199260175228119 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537729 chr6:26537746 . . 0 38 hm5C_associated_SNPs_5794 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26537718-26537758
64251 chr6 26537746 26537746 1 + A G rs116347594 26537736 + 26537716 26537756 41 GGTACGCGCAGGGCCAGTGGCGCAATGGATAACGCGTCTGA GGTACGCGCAGGGCCAGTGGCGCAATGGATGACGCGTCTGA < 41bp 1 0.775293242848375 1 0.838208794593811 experiment 0.44941351430325 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537736 chr6:26537746 . . 0 31 hm5C_associated_SNPs_5795 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26537718-26537758
64251 chr6 26537798 26537798 1 + G A rs143893043 26537781 + 26537761 26537801 41 GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGGTG GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCAGTG < 41bp 1 0.233451020767757 1 0.115375280380249 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26537781 chr6:26537798 . . 0 38 hm5C_associated_SNPs_5796 0 0 38 SSB POSTAR2 GSE95683,GSM2521600 chr6:26537760-26537800
64251 chr6 26538287 26538287 1 + C G rs190949316 26538286 + 26538266 26538306 41 AATAAGCCCTTAGTGGGTTTCCGTAGTGTAGTGGTTATCAC AATAAGCCCTTAGTGGGTTTCGGTAGTGTAGTGGTTATCAC < 41bp 1 0.713045533608323 1 0.746037006378174 experiment 0.573908932783353 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538286 chr6:26538287 . . 0 22 hm5C_associated_SNPs_5797 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538287 26538287 1 + C G rs190949316 26538304 + 26538284 26538324 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAA TTCGGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAA < 41bp 1 0.709703578313366 1 0.38780689239502 experiment 0.580592843373268 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538304 chr6:26538287 . . 0 4 hm5C_associated_SNPs_5798 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538287 26538287 1 + C G rs190949316 26538306 + 26538286 26538326 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG CGGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG < 41bp 1 0.0863699010160351 1 0.155587285757065 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538306 chr6:26538287 . . 0 2 hm5C_associated_SNPs_5799 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538286 + 26538266 26538306 41 AATAAGCCCTTAGTGGGTTTCCGTAGTGTAGTGGTTATCAC AATAAGCCCTTAGTGGGTTTCCGTAGCGTAGTGGTTATCAC < 41bp 1 0.326810797065898 1 0.359179317951202 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538286 chr6:26538292 . . 0 27 hm5C_associated_SNPs_5800 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538287 + 26538267 26538307 41 ATAAGCCCTTAGTGGGTTTCCGTAGTGTAGTGGTTATCACG ATAAGCCCTTAGTGGGTTTCCGTAGCGTAGTGGTTATCACG < 41bp 1 0.205013974961248 1 0.208754867315292 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538287 chr6:26538292 . . 0 26 hm5C_associated_SNPs_5801 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538304 + 26538284 26538324 41 TTCCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAA TTCCGTAGCGTAGTGGTTATCACGTTCGCCTCACACGCGAA < 41bp 1 0.710888052009441 1 0.293831169605255 experiment 0.578223895981118 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538304 chr6:26538292 . . 0 9 hm5C_associated_SNPs_5802 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538306 + 26538286 26538326 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG CCGTAGCGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG < 41bp 1 0.105366437988317 1 0.120933353900909 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538306 chr6:26538292 . . 0 7 hm5C_associated_SNPs_5803 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538310 + 26538290 26538330 41 AGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCC AGCGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCC < 41bp 1 0.199719777890918 1 0.751874566078186 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538310 chr6:26538292 . . 0 3 hm5C_associated_SNPs_5804 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538292 26538292 1 + T C rs147742184 26538312 + 26538292 26538332 41 TGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCC CGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCC < 41bp 1 0.165247218725675 1 0.324098169803619 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538312 chr6:26538292 . . 0 1 hm5C_associated_SNPs_5805 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538275-26538299
64251 chr6 26538326 26538326 1 + G A rs190989298 26538306 + 26538286 26538326 41 CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAA < 41bp 1 0.0931286738761998 1 0.0958474278450012 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538306 chr6:26538326 . . 0 41 hm5C_associated_SNPs_5806 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538310 + 26538290 26538330 41 AGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCC AGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAAGTCC < 41bp 1 0.20804479521715 1 0.718845963478088 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538310 chr6:26538326 . . 0 37 hm5C_associated_SNPs_5807 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538312 + 26538292 26538332 41 TGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCC TGTAGTGGTTATCACGTTCGCCTCACACGCGAAAAGTCCCC < 41bp 1 0.155147903561837 1 0.474003583192825 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538312 chr6:26538326 . . 0 35 hm5C_associated_SNPs_5808 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538313 + 26538293 26538333 41 GTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGCCTCACACGCGAAAAGTCCCCG < 41bp 1 0.0860407418426226 1 0.368951052427292 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538313 chr6:26538326 . . 0 34 hm5C_associated_SNPs_5809 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538315 + 26538295 26538335 41 AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGT AGTGGTTATCACGTTCGCCTCACACGCGAAAAGTCCCCGGT < 41bp 1 0.218661000006498 1 0.306784272193909 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538315 chr6:26538326 . . 0 32 hm5C_associated_SNPs_5810 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538317 + 26538297 26538337 41 TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTCACACGCGAAAAGTCCCCGGTTC < 41bp 1 0.417858668056472 1 0.429407000541687 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538317 chr6:26538326 . . 0 30 hm5C_associated_SNPs_5811 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538321 + 26538301 26538341 41 TATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTCACACGCGAAAAGTCCCCGGTTCGAAA < 41bp 1 0.497120035356835 1 0.511073648929596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538321 chr6:26538326 . . 0 26 hm5C_associated_SNPs_5812 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538326 26538326 1 + G A rs190989298 26538332 + 26538312 26538352 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTCACACGCGAAAAGTCCCCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.207195809616084 1 0.0862279832363129 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538332 chr6:26538326 . . 0 15 hm5C_associated_SNPs_5813 0 0 5 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538310 + 26538290 26538330 41 AGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCC AGTGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCA < 41bp 1 0.223786335544799 1 0.766175389289856 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538310 chr6:26538330 . . 0 41 hm5C_associated_SNPs_5814 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538312 + 26538292 26538332 41 TGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCC TGTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCACC < 41bp 1 0.136154755307493 1 0.410706281661987 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538312 chr6:26538330 . . 0 39 hm5C_associated_SNPs_5815 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538313 + 26538293 26538333 41 GTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCACCG < 41bp 1 0.0928820532320834 1 0.337578177452087 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538313 chr6:26538330 . . 0 38 hm5C_associated_SNPs_5816 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538315 + 26538295 26538335 41 AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGT AGTGGTTATCACGTTCGCCTCACACGCGAAAGGTCACCGGT < 41bp 1 0.192491459787513 1 0.110009849071503 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538315 chr6:26538330 . . 0 36 hm5C_associated_SNPs_5817 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538317 + 26538297 26538337 41 TGGTTATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTC TGGTTATCACGTTCGCCTCACACGCGAAAGGTCACCGGTTC < 41bp 1 0.372875451879824 1 0.141023278236389 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538317 chr6:26538330 . . 0 34 hm5C_associated_SNPs_5818 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538321 + 26538301 26538341 41 TATCACGTTCGCCTCACACGCGAAAGGTCCCCGGTTCGAAA TATCACGTTCGCCTCACACGCGAAAGGTCACCGGTTCGAAA < 41bp 1 0.55817848608222 1 0.330103188753128 experiment 0.883643027835559 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538321 chr6:26538330 . . 0 30 hm5C_associated_SNPs_5819 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538330 26538330 1 + C A rs140930809 26538332 + 26538312 26538352 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTCACACGCGAAAGGTCACCGGTTCGAAACCGGGCGGAAA < 41bp 1 0.222616891423413 1 0.13078910112381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538332 chr6:26538330 . . 0 19 hm5C_associated_SNPs_5820 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:26538320-26538340
64251 chr6 26538343 26538343 1 + C A rs569367600 26538332 + 26538312 26538352 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTCACACGCGAAAGGTCCCCGGTTCGAAACAGGGCGGAAA < 41bp 1 0.207403802784369 1 0.110215604305267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538332 chr6:26538343 . . 0 32 hm5C_associated_SNPs_5821 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538320-26538360
64251 chr6 26538349 26538349 1 + G A rs537828380 26538332 + 26538312 26538352 41 CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGGAAA CCTCACACGCGAAAGGTCCCCGGTTCGAAACCGGGCGAAAA < 41bp 1 0.200406173761748 1 0.065681129693985 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4 ENSG00000182952 upstream Human protein_coding chr6:26538332 chr6:26538349 . . 0 38 hm5C_associated_SNPs_5822 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:26538320-26538360
64251 chr6 26554380 26554380 1 + T C rs559301348 26554360 + 26554340 26554380 41 GGAGACAGGTGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGT GGAGACAGGTGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGC < 41bp 1 0.680282308910892 1 0.369744867086411 experiment 0.639435382178217 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26554360 chr6:26554380 . . 0 41 hm5C_associated_SNPs_5823 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26554340-26554386
64251 chr6 26554380 26554380 1 + T C rs559301348 26554375 + 26554355 26554395 41 GTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAG GTTAGCTCAGTTGGTTAGAGCGTGGCGCTAATAACGCCAAG < 41bp 1 0.607451725870756 1 0.484980940818787 experiment 0.785096548258489 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26554375 chr6:26554380 . . 0 26 hm5C_associated_SNPs_5824 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26554340-26554386
64251 chr6 26554380 26554380 1 + T C rs559301348 26554392 + 26554372 26554412 41 GAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCC GAGCGTGGCGCTAATAACGCCAAGGTCGCGGGTTCGATCCC < 41bp 1 0.6363982623127 1 0.458720743656158 experiment 0.7272034753746 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26554392 chr6:26554380 . . 0 9 hm5C_associated_SNPs_5825 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26554340-26554386
64251 chr6 26554380 26554380 1 + T C rs559301348 26554400 + 26554380 26554420 41 TGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG CGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG < 41bp 1 0.637991892983274 1 0.778744161128998 experiment 0.724016214033451 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26554400 chr6:26554380 . . 0 1 hm5C_associated_SNPs_5826 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26554340-26554386
64251 chr6 26555548 26555548 1 + G A rs543842360 26555536 + 26555516 26555556 41 TATGATTCTCGCTTAGGGTGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGGTGCGAGAGGTCCCGAGTTCAAAT < 41bp 1 0.716093136365095 1 0.520339608192444 experiment 0.567813727269811 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26555536 chr6:26555548 . . 0 33 hm5C_associated_SNPs_5827 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26555520-26555560
64251 chr6 26555548 26555548 1 + G A rs543842360 26555545 + 26555525 26555565 41 CGCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGGTGCGAGAGGTCCCGAGTTCAAATCCCGGACGA < 41bp 1 0.603591774036019 1 0.446463227272034 experiment 0.792816451927963 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26555545 chr6:26555548 . . 0 24 hm5C_associated_SNPs_5828 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26555520-26555560
64251 chr6 26555548 26555548 1 + G A rs543842360 26555546 + 26555526 26555566 41 GCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAG GCTTAGGGTGCGAGAGGTCCCGAGTTCAAATCCCGGACGAG < 41bp 1 0.773631581498421 1 0.722606360912323 experiment 0.452736837003158 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26555546 chr6:26555548 . . 0 23 hm5C_associated_SNPs_5829 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26555520-26555560
64251 chr6 26555548 26555548 1 + G A rs543842360 26555563 + 26555543 26555583 41 TCCCGGGTTCAAATCCCGGACGAGCCCTAGTTTTGTCCCTT TCCCGAGTTCAAATCCCGGACGAGCCCTAGTTTTGTCCCTT < 41bp 1 0.210367229583041 1 0.193556129932404 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26555563 chr6:26555548 . . 0 6 hm5C_associated_SNPs_5830 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26555520-26555560
64251 chr6 26556774 26556774 1 + G A rs560161343 26556775 + 26556755 26556795 41 AAGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAG AAGAGCTACGTTCGGGTGAACCCGGCTAGCTCAGTCGGTAG < 41bp 1 0.484639674134281 1 0.157790809869766 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556775 chr6:26556774 . . 0 20 hm5C_associated_SNPs_5831 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556776 + 26556756 26556796 41 AGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGA AGAGCTACGTTCGGGTGAACCCGGCTAGCTCAGTCGGTAGA < 41bp 1 0.358708577382862 1 0.837800204753876 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556776 chr6:26556774 . . 0 19 hm5C_associated_SNPs_5832 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556777 + 26556757 26556797 41 GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAG GAGCTACGTTCGGGTGAACCCGGCTAGCTCAGTCGGTAGAG < 41bp 1 0.639894966908375 1 0.773037672042847 experiment 0.72021006618325 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556777 chr6:26556774 . . 0 18 hm5C_associated_SNPs_5833 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556780 + 26556760 26556800 41 CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAT CTACGTTCGGGTGAACCCGGCTAGCTCAGTCGGTAGAGCAT < 41bp 1 0.200076029545128 1 0.0725846886634827 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556780 chr6:26556774 . . 0 15 hm5C_associated_SNPs_5834 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556784 + 26556764 26556804 41 GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA GTTCGGGTGAACCCGGCTAGCTCAGTCGGTAGAGCATGAGA < 41bp 1 0.660820348684791 1 0.173117727041245 experiment 0.678359302630418 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556784 chr6:26556774 . . 0 11 hm5C_associated_SNPs_5835 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556786 + 26556766 26556806 41 TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT TCGGGTGAACCCGGCTAGCTCAGTCGGTAGAGCATGAGACT < 41bp 1 0.314409507868247 1 0.345606505870819 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556786 chr6:26556774 . . 0 9 hm5C_associated_SNPs_5836 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556774 26556774 1 + G A rs560161343 26556790 + 26556770 26556810 41 GTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GTGAACCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA < 41bp 1 0.71448619689243 1 0.525527715682983 experiment 0.57102760621514 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556790 chr6:26556774 . . 0 5 hm5C_associated_SNPs_5837 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26556760-26556780
64251 chr6 26556784 26556784 1 + C T rs186106605 26556775 + 26556755 26556795 41 AAGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAG AAGAGCTACGTTCGGGTGAGCCCGGCTAGTTCAGTCGGTAG < 41bp 1 0.436353450724442 1 0.233109354972839 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556775 chr6:26556784 . . 0 30 hm5C_associated_SNPs_5838 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556776 + 26556756 26556796 41 AGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGA AGAGCTACGTTCGGGTGAGCCCGGCTAGTTCAGTCGGTAGA < 41bp 1 0.289445488703535 1 0.729590952396393 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556776 chr6:26556784 . . 0 29 hm5C_associated_SNPs_5839 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556777 + 26556757 26556797 41 GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAG GAGCTACGTTCGGGTGAGCCCGGCTAGTTCAGTCGGTAGAG < 41bp 1 0.531155372932687 1 0.768963217735291 experiment 0.937689254134627 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556777 chr6:26556784 . . 0 28 hm5C_associated_SNPs_5840 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556780 + 26556760 26556800 41 CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAT CTACGTTCGGGTGAGCCCGGCTAGTTCAGTCGGTAGAGCAT < 41bp 1 0.2724092784837 1 0.105085492134094 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556780 chr6:26556784 . . 0 25 hm5C_associated_SNPs_5841 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556786 + 26556766 26556806 41 TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT TCGGGTGAGCCCGGCTAGTTCAGTCGGTAGAGCATGAGACT < 41bp 1 0.353356109942116 1 0.374628484249115 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556786 chr6:26556784 . . 0 19 hm5C_associated_SNPs_5842 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556790 + 26556770 26556810 41 GTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GTGAGCCCGGCTAGTTCAGTCGGTAGAGCATGAGACTCTTA < 41bp 1 0.711208349564229 1 0.378474831581116 experiment 0.577583300871541 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556790 chr6:26556784 . . 0 15 hm5C_associated_SNPs_5843 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556784 26556784 1 + C T rs186106605 26556798 + 26556778 26556818 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GGCTAGTTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG < 41bp 1 0.667209487437955 1 0.173702597618103 experiment 0.66558102512409 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556798 chr6:26556784 . . 0 7 hm5C_associated_SNPs_5844 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556775 + 26556755 26556795 41 AAGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAG AAGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTAGGTAG < 41bp 1 0.427747731168098 1 0.153298139572144 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556775 chr6:26556790 . . 0 36 hm5C_associated_SNPs_5845 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556776 + 26556756 26556796 41 AGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGA AGAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTAGGTAGA < 41bp 1 0.258821291997188 1 0.736139178276062 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556776 chr6:26556790 . . 0 35 hm5C_associated_SNPs_5846 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556777 + 26556757 26556797 41 GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAG GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTAGGTAGAG < 41bp 1 0.512224542453829 1 0.64509129524231 experiment 0.975550915092342 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556777 chr6:26556790 . . 0 34 hm5C_associated_SNPs_5847 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556780 + 26556760 26556800 41 CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAT CTACGTTCGGGTGAGCCCGGCTAGCTCAGTAGGTAGAGCAT < 41bp 1 0.215278499203029 1 0.150166690349579 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556780 chr6:26556790 . . 0 31 hm5C_associated_SNPs_5848 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556784 + 26556764 26556804 41 GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA GTTCGGGTGAGCCCGGCTAGCTCAGTAGGTAGAGCATGAGA < 41bp 1 0.710989168880104 1 0.152820438146591 experiment 0.578021662239792 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556784 chr6:26556790 . . 0 27 hm5C_associated_SNPs_5849 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556786 + 26556766 26556806 41 TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT TCGGGTGAGCCCGGCTAGCTCAGTAGGTAGAGCATGAGACT < 41bp 1 0.740980296467616 1 0.529321134090424 experiment 0.518039407064769 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556786 chr6:26556790 . . 0 25 hm5C_associated_SNPs_5850 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556798 + 26556778 26556818 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GGCTAGCTCAGTAGGTAGAGCATGAGACTCTTAATCTCAGG < 41bp 1 0.652439295667712 1 0.196646809577942 experiment 0.695121408664576 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556798 chr6:26556790 . . 0 13 hm5C_associated_SNPs_5851 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556805 + 26556785 26556825 41 TCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG TCAGTAGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG < 41bp 1 0.161835241305497 1 0.0222905874252319 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556805 chr6:26556790 . . 0 6 hm5C_associated_SNPs_5852 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556790 26556790 1 + C A rs568173750 26556807 + 26556787 26556827 41 AGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT AGTAGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.423914999914778 1 0.271086394786835 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556807 chr6:26556790 . . 0 4 hm5C_associated_SNPs_5853 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556777 + 26556757 26556797 41 GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAG GAGCTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAA < 41bp 1 0.556471131411692 1 0.625701427459717 experiment 0.887057737176616 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556777 chr6:26556797 . . 0 41 hm5C_associated_SNPs_5854 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556780 + 26556760 26556800 41 CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAT CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAACAT < 41bp 1 0.197764149215405 1 0.115139335393906 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556780 chr6:26556797 . . 0 38 hm5C_associated_SNPs_5855 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556784 + 26556764 26556804 41 GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAACATGAGA < 41bp 1 0.660100327028184 1 0.20140752196312 experiment 0.679799345943632 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556784 chr6:26556797 . . 0 34 hm5C_associated_SNPs_5856 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556786 + 26556766 26556806 41 TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAACATGAGACT < 41bp 1 0.352201919474404 1 0.474842876195908 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556786 chr6:26556797 . . 0 32 hm5C_associated_SNPs_5857 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556790 + 26556770 26556810 41 GTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GTGAGCCCGGCTAGCTCAGTCGGTAGAACATGAGACTCTTA < 41bp 1 0.710962479588012 1 0.833501935005188 experiment 0.578075040823976 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556790 chr6:26556797 . . 0 28 hm5C_associated_SNPs_5858 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556798 + 26556778 26556818 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GGCTAGCTCAGTCGGTAGAACATGAGACTCTTAATCTCAGG < 41bp 1 0.708496637334856 1 0.266394078731537 experiment 0.583006725330288 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556798 chr6:26556797 . . 0 20 hm5C_associated_SNPs_5859 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556805 + 26556785 26556825 41 TCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG TCAGTCGGTAGAACATGAGACTCTTAATCTCAGGGTCGTGG < 41bp 1 0.111221897006396 1 0.0168132483959198 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556805 chr6:26556797 . . 0 13 hm5C_associated_SNPs_5860 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556807 + 26556787 26556827 41 AGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT AGTCGGTAGAACATGAGACTCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.419921253364282 1 0.253679603338242 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556807 chr6:26556797 . . 0 11 hm5C_associated_SNPs_5861 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556797 26556797 1 + G A rs60532838 26556813 + 26556793 26556833 41 TAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC TAGAACATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC < 41bp 1 0.65002960193672 1 0.62607216835022 experiment 0.69994079612656 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556813 chr6:26556797 . . 0 5 hm5C_associated_SNPs_5862 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556780 + 26556760 26556800 41 CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAT CTACGTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCAC < 41bp 1 0.232539740563899 1 0.146720856428146 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556780 chr6:26556800 . . 0 41 hm5C_associated_SNPs_5863 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556784 + 26556764 26556804 41 GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA GTTCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGA < 41bp 1 0.708084801562191 1 0.399325340986252 experiment 0.583830396875618 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556784 chr6:26556800 . . 0 37 hm5C_associated_SNPs_5864 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556786 + 26556766 26556806 41 TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT TCGGGTGAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACT < 41bp 1 0.374249142964966 1 0.496026456356049 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556786 chr6:26556800 . . 0 35 hm5C_associated_SNPs_5865 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556790 + 26556770 26556810 41 GTGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA GTGAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTA < 41bp 1 0.773459860323741 1 0.778866171836853 experiment 0.453080279352517 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556790 chr6:26556800 . . 0 31 hm5C_associated_SNPs_5866 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556805 + 26556785 26556825 41 TCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG TCAGTCGGTAGAGCACGAGACTCTTAATCTCAGGGTCGTGG < 41bp 1 0.137426126224398 1 0.0185150802135468 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556805 chr6:26556800 . . 0 16 hm5C_associated_SNPs_5867 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556807 + 26556787 26556827 41 AGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT AGTCGGTAGAGCACGAGACTCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.450332577010201 1 0.298878371715546 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556807 chr6:26556800 . . 0 14 hm5C_associated_SNPs_5868 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556800 26556800 1 + T C rs181253315 26556813 + 26556793 26556833 41 TAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC TAGAGCACGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC < 41bp 1 0.641830106195944 1 0.708553075790405 experiment 0.716339787608112 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556813 chr6:26556800 . . 0 8 hm5C_associated_SNPs_5869 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26556766-26556806
64251 chr6 26556835 26556835 1 + C T rs149649999 26556821 + 26556801 26556841 41 GAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTT GAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCTCACGTT < 41bp 1 0.537281559650702 1 0.391602545976639 experiment 0.925436880698596 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556821 chr6:26556835 . . 0 35 hm5C_associated_SNPs_5870 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556835 26556835 1 + C T rs149649999 26556829 + 26556809 26556849 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTC TAATCTCAGGGTCGTGGGTTCGAGCCTCACGTTGGGCGCTC < 41bp 1 0.550442592549543 1 0.342620849609375 experiment 0.899114814900915 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556829 chr6:26556835 . . 0 27 hm5C_associated_SNPs_5871 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556835 26556835 1 + C T rs149649999 26556833 + 26556813 26556853 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGT CTCAGGGTCGTGGGTTCGAGCCTCACGTTGGGCGCTCTGGT < 41bp 1 0.147839949594939 1 0.0408495664596558 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556833 chr6:26556835 . . 0 23 hm5C_associated_SNPs_5872 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556835 26556835 1 + C T rs149649999 26556834 + 26556814 26556854 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTT TCAGGGTCGTGGGTTCGAGCCTCACGTTGGGCGCTCTGGTT < 41bp 1 0.304267528989721 1 0.148253947496414 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556834 chr6:26556835 . . 0 22 hm5C_associated_SNPs_5873 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556835 26556835 1 + C T rs149649999 26556836 + 26556816 26556856 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTTT AGGGTCGTGGGTTCGAGCCTCACGTTGGGCGCTCTGGTTTT < 41bp 1 0.543753897637539 1 0.562356114387512 experiment 0.912492204724921 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556836 chr6:26556835 . . 0 20 hm5C_associated_SNPs_5874 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556835 26556835 1 + C T rs149649999 26556845 + 26556825 26556865 41 GGTTCGAGCCCCACGTTGGGCGCTCTGGTTTTCAATCCTAA GGTTCGAGCCTCACGTTGGGCGCTCTGGTTTTCAATCCTAA < 41bp 1 0.130400370102395 1 0.0811045169830322 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556845 chr6:26556835 . . 0 11 hm5C_associated_SNPs_5875 0 0 48 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556829 + 26556809 26556849 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTC TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGAGCGCTC < 41bp 1 0.45309376726743 1 0.472781985998154 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556829 chr6:26556843 . . 0 35 hm5C_associated_SNPs_5876 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556833 + 26556813 26556853 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGT CTCAGGGTCGTGGGTTCGAGCCCCACGTTGAGCGCTCTGGT < 41bp 1 0.381022637945384 1 0.0661522448062897 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556833 chr6:26556843 . . 0 31 hm5C_associated_SNPs_5877 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556834 + 26556814 26556854 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTT TCAGGGTCGTGGGTTCGAGCCCCACGTTGAGCGCTCTGGTT < 41bp 1 0.134031172541225 1 0.0797657668590546 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556834 chr6:26556843 . . 0 30 hm5C_associated_SNPs_5878 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556835 + 26556815 26556855 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTT CAGGGTCGTGGGTTCGAGCCCCACGTTGAGCGCTCTGGTTT < 41bp 1 0.335897463750604 1 0.103352934122086 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556835 chr6:26556843 . . 0 29 hm5C_associated_SNPs_5879 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556836 + 26556816 26556856 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTTT AGGGTCGTGGGTTCGAGCCCCACGTTGAGCGCTCTGGTTTT < 41bp 1 0.467481745071875 1 0.43321093916893 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556836 chr6:26556843 . . 0 28 hm5C_associated_SNPs_5880 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556843 26556843 1 + G A rs80287740 26556845 + 26556825 26556865 41 GGTTCGAGCCCCACGTTGGGCGCTCTGGTTTTCAATCCTAA GGTTCGAGCCCCACGTTGAGCGCTCTGGTTTTCAATCCTAA < 41bp 1 0.166038590241522 1 0.067291259765625 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556845 chr6:26556843 . . 0 19 hm5C_associated_SNPs_5881 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556829 + 26556809 26556849 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTC TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGAGCTC < 41bp 1 0.454554998613641 1 0.474408030509949 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556829 chr6:26556845 . . 0 37 hm5C_associated_SNPs_5882 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556833 + 26556813 26556853 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGT CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGAGCTCTGGT < 41bp 1 0.339403736650523 1 0.150196433067322 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556833 chr6:26556845 . . 0 33 hm5C_associated_SNPs_5883 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556834 + 26556814 26556854 41 TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTT TCAGGGTCGTGGGTTCGAGCCCCACGTTGGGAGCTCTGGTT < 41bp 1 0.145048130180062 1 0.138485640287399 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556834 chr6:26556845 . . 0 32 hm5C_associated_SNPs_5884 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556835 + 26556815 26556855 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTT CAGGGTCGTGGGTTCGAGCCCCACGTTGGGAGCTCTGGTTT < 41bp 1 0.386901595119322 1 0.1355100274086 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556835 chr6:26556845 . . 0 31 hm5C_associated_SNPs_5885 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26556845 26556845 1 + C A rs143390864 26556836 + 26556816 26556856 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGCTCTGGTTTT AGGGTCGTGGGTTCGAGCCCCACGTTGGGAGCTCTGGTTTT < 41bp 1 0.473017905676908 1 0.510483860969543 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HMGN4;LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26556836 chr6:26556845 . . 0 30 hm5C_associated_SNPs_5886 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26556822-26556849
64251 chr6 26569127 26569127 1 + C T rs192209980 26569110 + 26569090 26569130 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGT CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGTTGGTTGT < 41bp 1 0.571870660390565 1 0.537103414535522 experiment 0.85625867921887 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569110 chr6:26569127 . . 0 38 hm5C_associated_SNPs_5887 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569117 + 26569097 26569137 41 TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCCTTA TCAGTTGGTAGAGCGGAGGACTGTAGTTGGTTGTGTCCTTA < 41bp 1 0.470051470423148 1 0.112220138311386 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569117 chr6:26569127 . . 0 31 hm5C_associated_SNPs_5888 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569133 + 26569113 26569153 41 AGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGC AGGACTGTAGTTGGTTGTGTCCTTAGACATCCTTAGGTCGC < 41bp 1 0.0955827579530838 1 0.0974368453025818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569133 chr6:26569127 . . 0 15 hm5C_associated_SNPs_5889 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569134 + 26569114 26569154 41 GGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCT GGACTGTAGTTGGTTGTGTCCTTAGACATCCTTAGGTCGCT < 41bp 1 0.178932816558363 1 0.183841317892075 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569134 chr6:26569127 . . 0 14 hm5C_associated_SNPs_5890 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569140 + 26569120 26569160 41 TAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCG TAGTTGGTTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCG < 41bp 1 0.107680054940153 1 0.247524857521057 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569140 chr6:26569127 . . 0 8 hm5C_associated_SNPs_5891 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569143 + 26569123 26569163 41 TTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT TTGGTTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT < 41bp 1 0.0737094381018723 1 0.0343105792999268 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569143 chr6:26569127 . . 0 5 hm5C_associated_SNPs_5892 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569127 26569127 1 + C T rs192209980 26569144 + 26569124 26569164 41 TGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC TGGTTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.164558709427458 1 0.0963135659694672 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569144 chr6:26569127 . . 0 4 hm5C_associated_SNPs_5893 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569110 + 26569090 26569130 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGT CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTAT < 41bp 1 0.640429462896875 1 0.712877511978149 experiment 0.719141074206249 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569110 chr6:26569129 . . 0 40 hm5C_associated_SNPs_5894 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569117 + 26569097 26569137 41 TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCCTTA TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTATGTCCTTA < 41bp 1 0.541372796188199 1 0.116809248924255 experiment 0.917254407623602 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569117 chr6:26569129 . . 0 33 hm5C_associated_SNPs_5895 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569127 + 26569107 26569147 41 GAGCGGAGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTA GAGCGGAGGACTGTAGTTGGCTATGTCCTTAGACATCCTTA < 41bp 1 0.404950053242592 1 0.194549202919006 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569127 chr6:26569129 . . 0 23 hm5C_associated_SNPs_5896 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569133 + 26569113 26569153 41 AGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGC AGGACTGTAGTTGGCTATGTCCTTAGACATCCTTAGGTCGC < 41bp 1 0.120840606234436 1 0.157186061143875 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569133 chr6:26569129 . . 0 17 hm5C_associated_SNPs_5897 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569134 + 26569114 26569154 41 GGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCT GGACTGTAGTTGGCTATGTCCTTAGACATCCTTAGGTCGCT < 41bp 1 0.179899889925505 1 0.246869891881943 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569134 chr6:26569129 . . 0 16 hm5C_associated_SNPs_5898 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569140 + 26569120 26569160 41 TAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCG TAGTTGGCTATGTCCTTAGACATCCTTAGGTCGCTGGTTCG < 41bp 1 0.0866291081622687 1 0.0646917521953583 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569140 chr6:26569129 . . 0 10 hm5C_associated_SNPs_5899 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569143 + 26569123 26569163 41 TTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT TTGGCTATGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT < 41bp 1 0.0915326545657628 1 0.0350175499916077 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569143 chr6:26569129 . . 0 7 hm5C_associated_SNPs_5900 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569129 26569129 1 + G A rs183916234 26569144 + 26569124 26569164 41 TGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC TGGCTATGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.164105184370861 1 0.0749166309833527 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569144 chr6:26569129 . . 0 6 hm5C_associated_SNPs_5901 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569117 + 26569097 26569137 41 TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCCTTA TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCTTTA < 41bp 1 0.488724153872008 1 0.0948300659656525 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569117 chr6:26569134 . . 0 38 hm5C_associated_SNPs_5902 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569127 + 26569107 26569147 41 GAGCGGAGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTA GAGCGGAGGACTGTAGTTGGCTGTGTCTTTAGACATCCTTA < 41bp 1 0.524225443324225 1 0.143575012683868 experiment 0.95154911335155 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569127 chr6:26569134 . . 0 28 hm5C_associated_SNPs_5903 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569133 + 26569113 26569153 41 AGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGC AGGACTGTAGTTGGCTGTGTCTTTAGACATCCTTAGGTCGC < 41bp 1 0.225377806222637 1 0.524603545665741 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569133 chr6:26569134 . . 0 22 hm5C_associated_SNPs_5904 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569140 + 26569120 26569160 41 TAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCG TAGTTGGCTGTGTCTTTAGACATCCTTAGGTCGCTGGTTCG < 41bp 1 0.0928684496356173 1 0.129297941923141 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569140 chr6:26569134 . . 0 15 hm5C_associated_SNPs_5905 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569143 + 26569123 26569163 41 TTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT TTGGCTGTGTCTTTAGACATCCTTAGGTCGCTGGTTCGAAT < 41bp 1 0.0676817285013669 1 0.0263505876064301 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569143 chr6:26569134 . . 0 12 hm5C_associated_SNPs_5906 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569144 + 26569124 26569164 41 TGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC TGGCTGTGTCTTTAGACATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.162615487225417 1 0.159689784049988 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569144 chr6:26569134 . . 0 11 hm5C_associated_SNPs_5907 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569151 + 26569131 26569171 41 GTCCTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCG GTCTTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.47404670295751 1 0.229632437229156 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569151 chr6:26569134 . . 0 4 hm5C_associated_SNPs_5908 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569134 26569134 1 + C T rs111927231 26569153 + 26569133 26569173 41 CCTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAA CTTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAA < 41bp 1 0.541685028493321 1 0.102314233779907 experiment 0.916629943013357 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569153 chr6:26569134 . . 0 2 hm5C_associated_SNPs_5909 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569117 + 26569097 26569137 41 TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCCTTA TCAGTTGGTAGAGCGGAGGACTGTAGTTGGCTGTGTCCATA < 41bp 1 0.492160792694358 1 0.0649234354496002 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569117 chr6:26569135 . . 0 39 hm5C_associated_SNPs_5910 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569127 + 26569107 26569147 41 GAGCGGAGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTA GAGCGGAGGACTGTAGTTGGCTGTGTCCATAGACATCCTTA < 41bp 1 0.563797397634792 1 0.118205606937408 experiment 0.872405204730416 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569127 chr6:26569135 . . 0 29 hm5C_associated_SNPs_5911 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569133 + 26569113 26569153 41 AGGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGC AGGACTGTAGTTGGCTGTGTCCATAGACATCCTTAGGTCGC < 41bp 1 0.211951230263362 1 0.434670567512512 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569133 chr6:26569135 . . 0 23 hm5C_associated_SNPs_5912 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569134 + 26569114 26569154 41 GGACTGTAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCT GGACTGTAGTTGGCTGTGTCCATAGACATCCTTAGGTCGCT < 41bp 1 0.224778557548125 1 0.662037014961243 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569134 chr6:26569135 . . 0 22 hm5C_associated_SNPs_5913 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569140 + 26569120 26569160 41 TAGTTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCG TAGTTGGCTGTGTCCATAGACATCCTTAGGTCGCTGGTTCG < 41bp 1 0.0999930158357937 1 0.120133459568024 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569140 chr6:26569135 . . 0 16 hm5C_associated_SNPs_5914 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569143 + 26569123 26569163 41 TTGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAAT TTGGCTGTGTCCATAGACATCCTTAGGTCGCTGGTTCGAAT < 41bp 1 0.0730541969135848 1 0.0254406929016113 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569143 chr6:26569135 . . 0 13 hm5C_associated_SNPs_5915 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569144 + 26569124 26569164 41 TGGCTGTGTCCTTAGACATCCTTAGGTCGCTGGTTCGAATC TGGCTGTGTCCATAGACATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.172367018212074 1 0.119005501270294 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569144 chr6:26569135 . . 0 12 hm5C_associated_SNPs_5916 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569151 + 26569131 26569171 41 GTCCTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCG GTCCATAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.525071678407358 1 0.190785765647888 experiment 0.949856643185284 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569151 chr6:26569135 . . 0 5 hm5C_associated_SNPs_5917 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26569135 26569135 1 + T A rs36162392 26569153 + 26569133 26569173 41 CCTTAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAA CCATAGACATCCTTAGGTCGCTGGTTCGAATCCGGCTCGAA < 41bp 1 0.506971993036733 1 0.0782561600208282 experiment 0.986056013926534 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26569153 chr6:26569135 . . 0 3 hm5C_associated_SNPs_5918 0 1 62 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26569060-26569140
64251 chr6 26575805 26575805 1 + T A rs535861485 26575808 + 26575788 26575828 41 GCTAGGGGTCCTTTCGATAGCTCAGTTGGTAGAGCGGAGGA GCTAGGGGTCCTTTCGAAAGCTCAGTTGGTAGAGCGGAGGA < 41bp 1 0.616021972031439 1 0.505720496177673 experiment 0.767956055937123 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575808 chr6:26575805 . . 0 18 hm5C_associated_SNPs_5919 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:26575780-26575820
64251 chr6 26575805 26575805 1 + T A rs535861485 26575822 + 26575802 26575842 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTA CGAAAGCTCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTA < 41bp 1 0.556342185343984 1 0.506564259529114 experiment 0.887315629312032 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575822 chr6:26575805 . . 0 4 hm5C_associated_SNPs_5920 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:26575780-26575820
64251 chr6 26575823 26575823 1 + G A rs72844477 26575808 + 26575788 26575828 41 GCTAGGGGTCCTTTCGATAGCTCAGTTGGTAGAGCGGAGGA GCTAGGGGTCCTTTCGATAGCTCAGTTGGTAGAGCAGAGGA < 41bp 1 0.597911844109214 1 0.404089570045471 experiment 0.804176311781571 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575808 chr6:26575823 . . 0 36 hm5C_associated_SNPs_5921 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26575813-26575837
64251 chr6 26575823 26575823 1 + G A rs72844477 26575822 + 26575802 26575842 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTA CGATAGCTCAGTTGGTAGAGCAGAGGACTGTAGGTTCATTA < 41bp 1 0.506400843568587 1 0.41766569018364 experiment 0.987198312862826 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575822 chr6:26575823 . . 0 22 hm5C_associated_SNPs_5922 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26575813-26575837
64251 chr6 26575823 26575823 1 + G A rs72844477 26575829 + 26575809 26575849 41 TCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTAAACTAAG TCAGTTGGTAGAGCAGAGGACTGTAGGTTCATTAAACTAAG < 41bp 1 0.374501702970938 1 0.204728990793228 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575829 chr6:26575823 . . 0 15 hm5C_associated_SNPs_5923 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26575813-26575837
64251 chr6 26575851 26575851 1 + C T rs544695712 26575845 + 26575825 26575865 41 AGGACTGTAGGTTCATTAAACTAAGGCATCCTTAGGTCGCT AGGACTGTAGGTTCATTAAACTAAGGTATCCTTAGGTCGCT < 41bp 1 0.4663841701426 1 0.248264610767365 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575845 chr6:26575851 . . 0 27 hm5C_associated_SNPs_5924 0 0 80 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:26575790-26575858
64251 chr6 26575851 26575851 1 + C T rs544695712 26575855 + 26575835 26575875 41 GTTCATTAAACTAAGGCATCCTTAGGTCGCTGGTTCGAATC GTTCATTAAACTAAGGTATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.231303536455367 1 0.0521279871463776 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575855 chr6:26575851 . . 0 17 hm5C_associated_SNPs_5925 0 0 80 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:26575790-26575858
64251 chr6 26575851 26575851 1 + C T rs544695712 26575862 + 26575842 26575882 41 AAACTAAGGCATCCTTAGGTCGCTGGTTCGAATCCGGCTCG AAACTAAGGTATCCTTAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.578657403983022 1 0.516395211219788 experiment 0.842685192033955 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26575862 chr6:26575851 . . 0 10 hm5C_associated_SNPs_5926 0 0 80 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:26575790-26575858
64251 chr6 26577344 26577344 1 + C T rs569721137 26577342 + 26577322 26577362 41 CGTTCCGTGTCCTTCGATAGCTCAGTTGGTAGAGCGGAGGA CGTTCCGTGTCCTTCGATAGCTTAGTTGGTAGAGCGGAGGA < 41bp 1 0.416581299593106 1 0.223793089389801 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577342 chr6:26577344 . . 0 23 hm5C_associated_SNPs_5927 0 0 46 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26577320-26577360
64251 chr6 26577344 26577344 1 + C T rs569721137 26577356 + 26577336 26577376 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTA CGATAGCTTAGTTGGTAGAGCGGAGGACTGTAGGCTCATTA < 41bp 1 0.578734917203363 1 0.659112453460693 experiment 0.842530165593275 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577356 chr6:26577344 . . 0 9 hm5C_associated_SNPs_5928 0 0 46 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26577320-26577360
64251 chr6 26577344 26577344 1 + C T rs569721137 26577363 + 26577343 26577383 41 TCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGG TTAGTTGGTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGG < 41bp 1 0.459023131863316 1 0.16535821557045 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577363 chr6:26577344 . . 0 2 hm5C_associated_SNPs_5929 0 0 46 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26577320-26577360
64251 chr6 26577369 26577369 1 + G A rs553782580 26577356 + 26577336 26577376 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTA CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGACTCATTA < 41bp 1 0.568126135699714 1 0.743006467819214 experiment 0.863747728600572 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577356 chr6:26577369 . . 0 34 hm5C_associated_SNPs_5930 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577369 26577369 1 + G A rs553782580 26577363 + 26577343 26577383 41 TCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGG TCAGTTGGTAGAGCGGAGGACTGTAGACTCATTAAGCAAGG < 41bp 1 0.490456857422852 1 0.301230788230896 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577363 chr6:26577369 . . 0 27 hm5C_associated_SNPs_5931 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577369 26577369 1 + G A rs553782580 26577370 + 26577350 26577390 41 GTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTT GTAGAGCGGAGGACTGTAGACTCATTAAGCAAGGTATCCTT < 41bp 1 0.467135208373084 1 0.0606573522090912 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577370 chr6:26577369 . . 0 20 hm5C_associated_SNPs_5932 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577369 26577369 1 + G A rs553782580 26577372 + 26577352 26577392 41 AGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTTAG AGAGCGGAGGACTGTAGACTCATTAAGCAAGGTATCCTTAG < 41bp 1 0.419343210528832 1 0.0782718360424042 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577372 chr6:26577369 . . 0 18 hm5C_associated_SNPs_5933 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577369 26577369 1 + G A rs553782580 26577379 + 26577359 26577399 41 AGGACTGTAGGCTCATTAAGCAAGGTATCCTTAGGTCGCTG AGGACTGTAGACTCATTAAGCAAGGTATCCTTAGGTCGCTG < 41bp 1 0.743860099028818 1 0.843165636062622 experiment 0.512279801942364 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577379 chr6:26577369 . . 0 11 hm5C_associated_SNPs_5934 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577369 26577369 1 + G A rs553782580 26577388 + 26577368 26577408 41 GGCTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC GACTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.270153264435744 1 0.0356870293617249 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577388 chr6:26577369 . . 0 2 hm5C_associated_SNPs_5935 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577370 26577370 1 + C T rs12663894 26577356 + 26577336 26577376 41 CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTA CGATAGCTCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTA < 41bp 1 0.583241055448519 1 0.576026916503906 experiment 0.833517889102961 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577356 chr6:26577370 . . 0 35 hm5C_associated_SNPs_5936 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577370 26577370 1 + C T rs12663894 26577363 + 26577343 26577383 41 TCAGTTGGTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGG TCAGTTGGTAGAGCGGAGGACTGTAGGTTCATTAAGCAAGG < 41bp 1 0.448104908576843 1 0.301484942436218 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577363 chr6:26577370 . . 0 28 hm5C_associated_SNPs_5937 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577370 26577370 1 + C T rs12663894 26577372 + 26577352 26577392 41 AGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTTAG AGAGCGGAGGACTGTAGGTTCATTAAGCAAGGTATCCTTAG < 41bp 1 0.330808142221112 1 0.0319391489028931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577372 chr6:26577370 . . 0 19 hm5C_associated_SNPs_5938 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577370 26577370 1 + C T rs12663894 26577379 + 26577359 26577399 41 AGGACTGTAGGCTCATTAAGCAAGGTATCCTTAGGTCGCTG AGGACTGTAGGTTCATTAAGCAAGGTATCCTTAGGTCGCTG < 41bp 1 0.724734465573493 1 0.82957911491394 experiment 0.550531068853015 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577379 chr6:26577370 . . 0 12 hm5C_associated_SNPs_5939 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577370 26577370 1 + C T rs12663894 26577388 + 26577368 26577408 41 GGCTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC GGTTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.344714082704603 1 0.0365504324436188 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577388 chr6:26577370 . . 0 3 hm5C_associated_SNPs_5940 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26577320-26577380
64251 chr6 26577390 26577390 1 + T G rs562463752 26577370 + 26577350 26577390 41 GTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTT GTAGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTG < 41bp 1 0.494984599978336 1 0.12628561258316 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577370 chr6:26577390 . . 0 41 hm5C_associated_SNPs_5941 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577390 26577390 1 + T G rs562463752 26577372 + 26577352 26577392 41 AGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTTAG AGAGCGGAGGACTGTAGGCTCATTAAGCAAGGTATCCTGAG < 41bp 1 0.318905489205561 1 0.0343699157238007 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577372 chr6:26577390 . . 0 39 hm5C_associated_SNPs_5942 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577390 26577390 1 + T G rs562463752 26577379 + 26577359 26577399 41 AGGACTGTAGGCTCATTAAGCAAGGTATCCTTAGGTCGCTG AGGACTGTAGGCTCATTAAGCAAGGTATCCTGAGGTCGCTG < 41bp 1 0.748032707093989 1 0.905243813991547 experiment 0.503934585812022 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577379 chr6:26577390 . . 0 32 hm5C_associated_SNPs_5943 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577390 26577390 1 + T G rs562463752 26577388 + 26577368 26577408 41 GGCTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC GGCTCATTAAGCAAGGTATCCTGAGGTCGCTGGTTCGAATC < 41bp 1 0.644709284712677 1 0.16397950053215 experiment 0.710581430574647 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577388 chr6:26577390 . . 0 23 hm5C_associated_SNPs_5944 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577390 26577390 1 + T G rs562463752 26577395 + 26577375 26577415 41 TAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATCCGGCTCG TAAGCAAGGTATCCTGAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.663200643087322 1 0.44661745429039 experiment 0.673598713825355 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577395 chr6:26577390 . . 0 16 hm5C_associated_SNPs_5945 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577390 26577390 1 + T G rs562463752 26577397 + 26577377 26577417 41 AGCAAGGTATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA AGCAAGGTATCCTGAGGTCGCTGGTTCGAATCCGGCTCGGA < 41bp 1 0.578593275450067 1 0.172627538442612 experiment 0.842813449099866 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577397 chr6:26577390 . . 0 14 hm5C_associated_SNPs_5946 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577401 26577401 1 + T C rs76864766 26577388 + 26577368 26577408 41 GGCTCATTAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATC GGCTCATTAAGCAAGGTATCCTTAGGTCGCTGGCTCGAATC < 41bp 1 0.310265161386685 1 0.0226036012172699 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577388 chr6:26577401 . . 0 34 hm5C_associated_SNPs_5947 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577401 26577401 1 + T C rs76864766 26577395 + 26577375 26577415 41 TAAGCAAGGTATCCTTAGGTCGCTGGTTCGAATCCGGCTCG TAAGCAAGGTATCCTTAGGTCGCTGGCTCGAATCCGGCTCG < 41bp 1 0.573186515899945 1 0.446374297142029 experiment 0.853626968200109 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577395 chr6:26577401 . . 0 27 hm5C_associated_SNPs_5948 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26577401 26577401 1 + T C rs76864766 26577397 + 26577377 26577417 41 AGCAAGGTATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA AGCAAGGTATCCTTAGGTCGCTGGCTCGAATCCGGCTCGGA < 41bp 1 0.440633564071692 1 0.185923248529434 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26577397 chr6:26577401 . . 0 25 hm5C_associated_SNPs_5949 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26577383-26577403
64251 chr6 26595117 26595117 1 + C A rs140030468 26595103 + 26595083 26595123 41 AAAACGAGGGTAATGACATCCTTCGATAGCTCAGCTGGTAG AAAACGAGGGTAATGACATCCTTCGATAGCTCAGATGGTAG < 41bp 1 0.253937135743985 1 0.549496829509735 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595103 chr6:26595117 . . 0 35 hm5C_associated_SNPs_5950 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595117 26595117 1 + C A rs140030468 26595106 + 26595086 26595126 41 ACGAGGGTAATGACATCCTTCGATAGCTCAGCTGGTAGAGC ACGAGGGTAATGACATCCTTCGATAGCTCAGATGGTAGAGC < 41bp 1 0.303358392702558 1 0.363350510597229 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595106 chr6:26595117 . . 0 32 hm5C_associated_SNPs_5951 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595117 26595117 1 + C A rs140030468 26595112 + 26595092 26595132 41 GTAATGACATCCTTCGATAGCTCAGCTGGTAGAGCGGAGGA GTAATGACATCCTTCGATAGCTCAGATGGTAGAGCGGAGGA < 41bp 1 0.561438705966546 1 0.274462550878525 experiment 0.877122588066908 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595112 chr6:26595117 . . 0 26 hm5C_associated_SNPs_5952 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595117 26595117 1 + C A rs140030468 26595114 + 26595094 26595134 41 AATGACATCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACT AATGACATCCTTCGATAGCTCAGATGGTAGAGCGGAGGACT < 41bp 1 0.413610832046018 1 0.607386469841003 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595114 chr6:26595117 . . 0 24 hm5C_associated_SNPs_5953 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595117 26595117 1 + C A rs140030468 26595126 + 26595106 26595146 41 CGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGGGGTTTGA CGATAGCTCAGATGGTAGAGCGGAGGACTGTAGGGGTTTGA < 41bp 1 0.551403465751413 1 0.577411472797394 experiment 0.897193068497174 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595126 chr6:26595117 . . 0 12 hm5C_associated_SNPs_5954 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595117 26595117 1 + C A rs140030468 26595133 + 26595113 26595153 41 TCAGCTGGTAGAGCGGAGGACTGTAGGGGTTTGAATGTGGT TCAGATGGTAGAGCGGAGGACTGTAGGGGTTTGAATGTGGT < 41bp 1 0.417186606268013 1 0.222931087017059 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595133 chr6:26595117 . . 0 5 hm5C_associated_SNPs_5955 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595156 26595156 1 + T G rs190912797 26595154 + 26595134 26595174 41 TGTAGGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGGGGTTTGAATGTGGTCAGCCTTAGGTCGCTGGTTCG < 41bp 1 0.49838318287366 1 0.265543639659882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595154 chr6:26595156 . . 0 23 hm5C_associated_SNPs_5956 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595156 26595156 1 + T G rs190912797 26595158 + 26595138 26595178 41 GGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCGAATC GGGGTTTGAATGTGGTCAGCCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.275102426702366 1 0.12240132689476 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595158 chr6:26595156 . . 0 19 hm5C_associated_SNPs_5957 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595156 26595156 1 + T G rs190912797 26595165 + 26595145 26595185 41 GAATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCG GAATGTGGTCAGCCTTAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.612379432006574 1 0.347657352685928 experiment 0.775241135986852 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595165 chr6:26595156 . . 0 12 hm5C_associated_SNPs_5958 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595156 26595156 1 + T G rs190912797 26595167 + 26595147 26595187 41 ATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA ATGTGGTCAGCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA < 41bp 1 0.516289620839907 1 0.0517227947711945 experiment 0.967420758320186 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595167 chr6:26595156 . . 0 10 hm5C_associated_SNPs_5959 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595156 26595156 1 + T G rs190912797 26595173 + 26595153 26595193 41 TCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTT TCAGCCTTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTT < 41bp 1 0.208475261992819 1 0.194116294384003 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595173 chr6:26595156 . . 0 4 hm5C_associated_SNPs_5960 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595157 26595157 1 + C G rs143540658 26595154 + 26595134 26595174 41 TGTAGGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGGGGTTTGAATGTGGTCATGCTTAGGTCGCTGGTTCG < 41bp 1 0.36167351404052 1 0.402230083942413 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595154 chr6:26595157 . . 0 24 hm5C_associated_SNPs_5961 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595157 26595157 1 + C G rs143540658 26595158 + 26595138 26595178 41 GGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCGAATC GGGGTTTGAATGTGGTCATGCTTAGGTCGCTGGTTCGAATC < 41bp 1 0.293807779772972 1 0.0541102588176727 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595158 chr6:26595157 . . 0 20 hm5C_associated_SNPs_5962 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595157 26595157 1 + C G rs143540658 26595165 + 26595145 26595185 41 GAATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCG GAATGTGGTCATGCTTAGGTCGCTGGTTCGAATCCGGCTCG < 41bp 1 0.590754896858636 1 0.311345160007477 experiment 0.818490206282729 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595165 chr6:26595157 . . 0 13 hm5C_associated_SNPs_5963 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595157 26595157 1 + C G rs143540658 26595167 + 26595147 26595187 41 ATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA ATGTGGTCATGCTTAGGTCGCTGGTTCGAATCCGGCTCGGA < 41bp 1 0.51822338923049 1 0.0660079717636108 experiment 0.963553221539019 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595167 chr6:26595157 . . 0 11 hm5C_associated_SNPs_5964 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595157 26595157 1 + C G rs143540658 26595173 + 26595153 26595193 41 TCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTT TCATGCTTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTT < 41bp 1 0.224169409708513 1 0.183657050132751 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595173 chr6:26595157 . . 0 5 hm5C_associated_SNPs_5965 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595080-26595160
64251 chr6 26595168 26595168 1 + T C rs9461276 26595154 + 26595134 26595174 41 TGTAGGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGGGGTTTGAATGTGGTCATCCTTAGGTCGCCGGTTCG < 41bp 1 0.219530677562002 1 0.134768545627594 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595154 chr6:26595168 . . 0 35 hm5C_associated_SNPs_5966 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26595168 26595168 1 + T C rs9461276 26595158 + 26595138 26595178 41 GGGGTTTGAATGTGGTCATCCTTAGGTCGCTGGTTCGAATC GGGGTTTGAATGTGGTCATCCTTAGGTCGCCGGTTCGAATC < 41bp 1 0.347479232687981 1 0.0753412544727325 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595158 chr6:26595168 . . 0 31 hm5C_associated_SNPs_5967 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26595168 26595168 1 + T C rs9461276 26595165 + 26595145 26595185 41 GAATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCG GAATGTGGTCATCCTTAGGTCGCCGGTTCGAATCCGGCTCG < 41bp 1 0.720150111406525 1 0.232392549514771 experiment 0.559699777186949 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595165 chr6:26595168 . . 0 24 hm5C_associated_SNPs_5968 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26595168 26595168 1 + T C rs9461276 26595167 + 26595147 26595187 41 ATGTGGTCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGA ATGTGGTCATCCTTAGGTCGCCGGTTCGAATCCGGCTCGGA < 41bp 1 0.315393670166045 1 0.064696729183197 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595167 chr6:26595168 . . 0 22 hm5C_associated_SNPs_5969 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26595168 26595168 1 + T C rs9461276 26595173 + 26595153 26595193 41 TCATCCTTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTT TCATCCTTAGGTCGCCGGTTCGAATCCGGCTCGGAGGAGTT < 41bp 1 0.190534186623124 1 0.116377949714661 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595173 chr6:26595168 . . 0 16 hm5C_associated_SNPs_5970 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26595168 26595168 1 + T C rs9461276 26595179 + 26595159 26595199 41 TTAGGTCGCTGGTTCGAATCCGGCTCGGAGGAGTTCCATTT TTAGGTCGCCGGTTCGAATCCGGCTCGGAGGAGTTCCATTT < 41bp 1 0.539113063214328 1 0.563086986541748 experiment 0.921773873571344 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC105374988;ABT1 ENSG00000182952;ENSG00000146109 intergenic Human other chr6:26595179 chr6:26595168 . . 0 10 hm5C_associated_SNPs_5971 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26595093-26595178
64251 chr6 26597189 26597189 1 + C G rs116818425 26597193 + 26597173 26597213 41 GGCACTTTACGGCCGTCGTGCCGCTCGTGTCAGTCAACATG GGCACTTTACGGCCGTGGTGCCGCTCGTGTCAGTCAACATG < 41bp 1 0.215982659011327 1 0.0529029965400696 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABT1 ENSG00000146109 UTR5 Human protein_coding chr6:26597193 chr6:26597189 . . 0 17 hm5C_associated_SNPs_5972 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26597180-26597200
64251 chr6 26597189 26597189 1 + C G rs116818425 26597203 + 26597183 26597223 41 GGCCGTCGTGCCGCTCGTGTCAGTCAACATGGAGGCAGAGG GGCCGTGGTGCCGCTCGTGTCAGTCAACATGGAGGCAGAGG < 41bp 1 0.398818377244413 1 0.387940585613251 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABT1 ENSG00000146109 UTR5 Human protein_coding chr6:26597203 chr6:26597189 . . 0 7 hm5C_associated_SNPs_5973 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26597180-26597200
64251 chr6 26701713 26701713 1 + C T rs367740197 26701722 + 26701702 26701742 41 TCAACAGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGT TCAACAGCAAGTCCTCTTAGCGCAGCTGGCAGCGCGTCAGT < 41bp 1 0.574626048642974 1 0.543473541736603 experiment 0.850747902714052 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701722 chr6:26701713 . . 0 12 hm5C_associated_SNPs_5974 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701713 26701713 1 + C T rs367740197 26701724 + 26701704 26701744 41 AACAGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCT AACAGCAAGTCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCT < 41bp 1 0.580681090117035 1 0.56800365447998 experiment 0.838637819765929 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701724 chr6:26701713 . . 0 10 hm5C_associated_SNPs_5975 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701713 26701713 1 + C T rs367740197 26701727 + 26701707 26701747 41 AGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCAT AGCAAGTCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCAT < 41bp 1 0.278470920157661 1 0.401172906160355 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701727 chr6:26701713 . . 0 7 hm5C_associated_SNPs_5976 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701713 26701713 1 + C T rs367740197 26701731 + 26701711 26701751 41 AGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATC AGTCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATC < 41bp 1 0.547295275749272 1 0.320651829242706 experiment 0.905409448501456 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701731 chr6:26701713 . . 0 3 hm5C_associated_SNPs_5977 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701713 + 26701693 26701733 41 TGCCCGAGCTCAACAGCAAGCCCTCTTAGCGCAGCTGGCAG TGCCCGAGCTCAACAGCAAGCTCTCTTAGCGCAGCTGGCAG < 41bp 1 0.205306600531896 1 0.102251976728439 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701713 chr6:26701714 . . 0 22 hm5C_associated_SNPs_5978 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701722 + 26701702 26701742 41 TCAACAGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGT TCAACAGCAAGCTCTCTTAGCGCAGCTGGCAGCGCGTCAGT < 41bp 1 0.584125591908802 1 0.316904515028 experiment 0.831748816182396 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701722 chr6:26701714 . . 0 13 hm5C_associated_SNPs_5979 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701724 + 26701704 26701744 41 AACAGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCT AACAGCAAGCTCTCTTAGCGCAGCTGGCAGCGCGTCAGTCT < 41bp 1 0.543871474932415 1 0.303204417228699 experiment 0.912257050135171 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701724 chr6:26701714 . . 0 11 hm5C_associated_SNPs_5980 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701727 + 26701707 26701747 41 AGCAAGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCAT AGCAAGCTCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCAT < 41bp 1 0.318782162084305 1 0.281933307647705 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701727 chr6:26701714 . . 0 8 hm5C_associated_SNPs_5981 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701731 + 26701711 26701751 41 AGCCCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATC AGCTCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATC < 41bp 1 0.480638187095694 1 0.350288420915604 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701731 chr6:26701714 . . 0 4 hm5C_associated_SNPs_5982 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701714 26701714 1 + C T rs564464886 26701734 + 26701714 26701754 41 CCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATCTGA TCTCTTAGCGCAGCTGGCAGCGCGTCAGTCTCATAATCTGA < 41bp 1 0.504140690450825 1 0.417886286973953 experiment 0.99171861909835 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701734 chr6:26701714 . . 0 1 hm5C_associated_SNPs_5983 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26701700-26701720
64251 chr6 26701764 26701764 1 + G C rs568788393 26701745 + 26701725 26701765 41 AGCTGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGT AGCTGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGACT < 41bp 1 0.522399476165588 1 0.610693693161011 experiment 0.955201047668825 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701745 chr6:26701764 . . 0 40 hm5C_associated_SNPs_5984 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701751 + 26701731 26701771 41 CAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGTTCAAGC CAGCGCGTCAGTCTCATAATCTGAAGGTCCTGACTTCAAGC < 41bp 1 0.683300662599533 1 0.404738217592239 experiment 0.633398674800933 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701751 chr6:26701764 . . 0 34 hm5C_associated_SNPs_5985 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701759 + 26701739 26701779 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGACTTCAAGCCTCAGAGA < 41bp 1 0.20418928519172 1 0.040206253528595 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701759 chr6:26701764 . . 0 26 hm5C_associated_SNPs_5986 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701760 + 26701740 26701780 41 AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGACTTCAAGCCTCAGAGAG < 41bp 1 0.260411294927046 1 0.086752325296402 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701760 chr6:26701764 . . 0 25 hm5C_associated_SNPs_5987 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701767 + 26701747 26701787 41 TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCA TAATCTGAAGGTCCTGACTTCAAGCCTCAGAGAGGGCATCA < 41bp 1 0.37907566803002 1 0.117136359214783 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701767 chr6:26701764 . . 0 18 hm5C_associated_SNPs_5988 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701771 + 26701751 26701791 41 CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTC CTGAAGGTCCTGACTTCAAGCCTCAGAGAGGGCATCACTTC < 41bp 1 0.238666383507427 1 0.0977004766464233 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701771 chr6:26701764 . . 0 14 hm5C_associated_SNPs_5989 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701772 + 26701752 26701792 41 TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCT TGAAGGTCCTGACTTCAAGCCTCAGAGAGGGCATCACTTCT < 41bp 1 0.306471708690766 1 0.210283011198044 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701772 chr6:26701764 . . 0 13 hm5C_associated_SNPs_5990 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701764 26701764 1 + G C rs568788393 26701774 + 26701754 26701794 41 AAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCTGC AAGGTCCTGACTTCAAGCCTCAGAGAGGGCATCACTTCTGC < 41bp 1 0.480710113852958 1 0.890538096427917 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701774 chr6:26701764 . . 0 11 hm5C_associated_SNPs_5991 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701772 26701772 1 + C T rs547971502 26701759 + 26701739 26701779 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCTTCAGAGA < 41bp 1 0.263932204296183 1 0.0443944334983826 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701759 chr6:26701772 . . 0 34 hm5C_associated_SNPs_5992 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701772 26701772 1 + C T rs547971502 26701760 + 26701740 26701780 41 AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCTTCAGAGAG < 41bp 1 0.550778962036508 1 0.11129903793335 experiment 0.898442075926984 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701760 chr6:26701772 . . 0 33 hm5C_associated_SNPs_5993 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701772 26701772 1 + C T rs547971502 26701767 + 26701747 26701787 41 TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCA TAATCTGAAGGTCCTGAGTTCAAGCTTCAGAGAGGGCATCA < 41bp 1 0.442496655910686 1 0.0548515617847443 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701767 chr6:26701772 . . 0 26 hm5C_associated_SNPs_5994 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701772 26701772 1 + C T rs547971502 26701771 + 26701751 26701791 41 CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTC CTGAAGGTCCTGAGTTCAAGCTTCAGAGAGGGCATCACTTC < 41bp 1 0.480186182960634 1 0.267610728740692 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701771 chr6:26701772 . . 0 22 hm5C_associated_SNPs_5995 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701772 26701772 1 + C T rs547971502 26701774 + 26701754 26701794 41 AAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCTGC AAGGTCCTGAGTTCAAGCTTCAGAGAGGGCATCACTTCTGC < 41bp 1 0.492452267622091 1 0.858412861824036 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701774 chr6:26701772 . . 0 19 hm5C_associated_SNPs_5996 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701759 + 26701739 26701779 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCACAGAGA < 41bp 1 0.24320681189569 1 0.0959343910217285 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701759 chr6:26701773 . . 0 35 hm5C_associated_SNPs_5997 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701760 + 26701740 26701780 41 AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCACAGAGAG < 41bp 1 0.530930499149391 1 0.326658368110657 experiment 0.938139001701219 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701760 chr6:26701773 . . 0 34 hm5C_associated_SNPs_5998 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701767 + 26701747 26701787 41 TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCA TAATCTGAAGGTCCTGAGTTCAAGCCACAGAGAGGGCATCA < 41bp 1 0.367698969108412 1 0.0558332502841949 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701767 chr6:26701773 . . 0 27 hm5C_associated_SNPs_5999 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701771 + 26701751 26701791 41 CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTC CTGAAGGTCCTGAGTTCAAGCCACAGAGAGGGCATCACTTC < 41bp 1 0.463080128245906 1 0.28318452835083 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701771 chr6:26701773 . . 0 23 hm5C_associated_SNPs_6000 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701772 + 26701752 26701792 41 TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCT TGAAGGTCCTGAGTTCAAGCCACAGAGAGGGCATCACTTCT < 41bp 1 0.376687339096676 1 0.261128753423691 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701772 chr6:26701773 . . 0 22 hm5C_associated_SNPs_6001 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701773 26701773 1 + T A rs567960270 26701774 + 26701754 26701794 41 AAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCTGC AAGGTCCTGAGTTCAAGCCACAGAGAGGGCATCACTTCTGC < 41bp 1 0.455001565092307 1 0.728691220283508 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701774 chr6:26701773 . . 0 20 hm5C_associated_SNPs_6002 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701759 + 26701739 26701779 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAAA < 41bp 1 0.296327913002128 1 0.0543746650218964 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701759 chr6:26701778 . . 0 40 hm5C_associated_SNPs_6003 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701760 + 26701740 26701780 41 AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGAGTTCAAGCCTCAGAAAG < 41bp 1 0.516982640390974 1 0.118834286928177 experiment 0.966034719218052 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701760 chr6:26701778 . . 0 39 hm5C_associated_SNPs_6004 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701767 + 26701747 26701787 41 TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCA TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAAAGGGCATCA < 41bp 1 0.373790462894914 1 0.0683077275753021 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701767 chr6:26701778 . . 0 32 hm5C_associated_SNPs_6005 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701771 + 26701751 26701791 41 CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTC CTGAAGGTCCTGAGTTCAAGCCTCAGAAAGGGCATCACTTC < 41bp 1 0.252301769073634 1 0.117829144001007 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701771 chr6:26701778 . . 0 28 hm5C_associated_SNPs_6006 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701772 + 26701752 26701792 41 TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCT TGAAGGTCCTGAGTTCAAGCCTCAGAAAGGGCATCACTTCT < 41bp 1 0.343415668550976 1 0.150454133749008 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701772 chr6:26701778 . . 0 27 hm5C_associated_SNPs_6007 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701778 26701778 1 + G A rs553592532 26701774 + 26701754 26701794 41 AAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCTGC AAGGTCCTGAGTTCAAGCCTCAGAAAGGGCATCACTTCTGC < 41bp 1 0.582340040115375 1 0.807771801948547 experiment 0.83531991976925 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701774 chr6:26701778 . . 0 25 hm5C_associated_SNPs_6008 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701720-26701780
64251 chr6 26701783 26701783 1 + C A rs9295703 26701767 + 26701747 26701787 41 TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCA TAATCTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGAATCA < 41bp 1 0.361209717503027 1 0.0538369715213776 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701767 chr6:26701783 . . 0 37 hm5C_associated_SNPs_6009 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701734-26701793
64251 chr6 26701783 26701783 1 + C A rs9295703 26701771 + 26701751 26701791 41 CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTC CTGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGAATCACTTC < 41bp 1 0.265251230638283 1 0.128501504659653 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701771 chr6:26701783 . . 0 33 hm5C_associated_SNPs_6010 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701734-26701793
64251 chr6 26701783 26701783 1 + C A rs9295703 26701772 + 26701752 26701792 41 TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCT TGAAGGTCCTGAGTTCAAGCCTCAGAGAGGGAATCACTTCT < 41bp 1 0.342362327277388 1 0.29172295331955 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701772 chr6:26701783 . . 0 32 hm5C_associated_SNPs_6011 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701734-26701793
64251 chr6 26701783 26701783 1 + C A rs9295703 26701774 + 26701754 26701794 41 AAGGTCCTGAGTTCAAGCCTCAGAGAGGGCATCACTTCTGC AAGGTCCTGAGTTCAAGCCTCAGAGAGGGAATCACTTCTGC < 41bp 1 0.487141072293604 1 0.918434679508209 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF322;GUSBP2 ENSG00000261584;ENSG00000241549 intergenic Human other chr6:26701774 chr6:26701783 . . 0 30 hm5C_associated_SNPs_6012 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:26701734-26701793
64251 chr6 27059549 27059549 1 + G A rs546888167 27059532 + 27059512 27059552 41 TTTCTAAGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TTTCTAAGTGGCTCGTTGGTCTAGGGGTATGATTCTCACTT < 41bp 1 0.653683876384752 1 0.572397232055664 experiment 0.692632247230496 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059532 chr6:27059549 . . 0 38 hm5C_associated_SNPs_6013 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059546 + 27059526 27059566 41 GTTGGTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGT GTTGGTCTAGGGGTATGATTCTCACTTCGGGTGTGAGAGGT < 41bp 1 0.389735558903382 1 0.601632475852966 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059546 chr6:27059549 . . 0 24 hm5C_associated_SNPs_6014 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059548 + 27059528 27059568 41 TGGTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCC TGGTCTAGGGGTATGATTCTCACTTCGGGTGTGAGAGGTCC < 41bp 1 0.263086913116263 1 0.271160989999771 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059548 chr6:27059549 . . 0 22 hm5C_associated_SNPs_6015 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059550 + 27059530 27059570 41 GTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCCCG GTCTAGGGGTATGATTCTCACTTCGGGTGTGAGAGGTCCCG < 41bp 1 0.389470392422173 1 0.127282053232193 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059550 chr6:27059549 . . 0 20 hm5C_associated_SNPs_6016 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059553 + 27059533 27059573 41 TAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCCCGGGT TAGGGGTATGATTCTCACTTCGGGTGTGAGAGGTCCCGGGT < 41bp 1 0.769982650848051 1 0.940328598022461 experiment 0.460034698303899 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059553 chr6:27059549 . . 0 17 hm5C_associated_SNPs_6017 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059567 + 27059547 27059587 41 TCGCTTCGGGTGTGAGAGGTCCCGGGTTCAAATCCCGGACG TCACTTCGGGTGTGAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.752344884351016 1 0.630744636058807 experiment 0.495310231297969 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059567 chr6:27059549 . . 0 3 hm5C_associated_SNPs_6018 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059549 27059549 1 + G A rs546888167 27059568 + 27059548 27059588 41 CGCTTCGGGTGTGAGAGGTCCCGGGTTCAAATCCCGGACGA CACTTCGGGTGTGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.720222487506869 1 0.649686813354492 experiment 0.559555024986263 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059568 chr6:27059549 . . 0 2 hm5C_associated_SNPs_6019 0 0 72 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27059500-27059560
64251 chr6 27059568 27059568 1 + C G rs370604102 27059548 + 27059528 27059568 41 TGGTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCG < 41bp 1 0.309553803016689 1 0.291202902793884 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059548 chr6:27059568 . . 0 41 hm5C_associated_SNPs_6020 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059550 + 27059530 27059570 41 GTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCGCG < 41bp 1 0.335022769907961 1 0.065388560295105 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059550 chr6:27059568 . . 0 39 hm5C_associated_SNPs_6021 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059553 + 27059533 27059573 41 TAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCCCGGGT TAGGGGTATGATTCTCGCTTCGGGTGTGAGAGGTCGCGGGT < 41bp 1 0.706226032983103 1 0.894630432128906 experiment 0.587547934033793 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059553 chr6:27059568 . . 0 36 hm5C_associated_SNPs_6022 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059575 + 27059555 27059595 41 GGTGTGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCACT GGTGTGAGAGGTCGCGGGTTCAAATCCCGGACGAGCCCACT < 41bp 1 0.338793626280247 1 0.694043219089508 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059575 chr6:27059568 . . 0 14 hm5C_associated_SNPs_6023 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059580 + 27059560 27059600 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCACTTCATT GAGAGGTCGCGGGTTCAAATCCCGGACGAGCCCACTTCATT < 41bp 1 0.490880754425803 1 0.734526872634888 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059580 chr6:27059568 . . 0 9 hm5C_associated_SNPs_6024 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059581 + 27059561 27059601 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCACTTCATTT AGAGGTCGCGGGTTCAAATCCCGGACGAGCCCACTTCATTT < 41bp 1 0.717066937703273 1 0.748589694499969 experiment 0.565866124593453 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059581 chr6:27059568 . . 0 8 hm5C_associated_SNPs_6025 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059582 + 27059562 27059602 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCACTTCATTTT GAGGTCGCGGGTTCAAATCCCGGACGAGCCCACTTCATTTT < 41bp 1 0.431438800938116 1 0.413327813148499 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059582 chr6:27059568 . . 0 7 hm5C_associated_SNPs_6026 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27059568 27059568 1 + C G rs370604102 27059586 + 27059566 27059606 41 TCCCGGGTTCAAATCCCGGACGAGCCCACTTCATTTTCGCC TCGCGGGTTCAAATCCCGGACGAGCCCACTTCATTTTCGCC < 41bp 1 0.131945556382011 1 0.0842645764350891 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27059586 chr6:27059568 . . 0 3 hm5C_associated_SNPs_6027 0 0 41 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27059500-27059580
64251 chr6 27065095 27065095 1 + C T rs185394001 27065096 + 27065076 27065116 41 GGTTATCAAGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC GGTTATCAAGACGAGGTGGTCGAGTGGTTAAGGCGATGGAC < 41bp 1 0.669910305032744 1 0.765702366828918 experiment 0.660179389934513 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065096 chr6:27065095 . . 0 20 hm5C_associated_SNPs_6028 0 0 13 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065137 + 27065117 27065157 41 TGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCA TGCTAATCCATTGTGCTCTGCACGCATGGGTTCGAATCCCA < 41bp 1 0.340297876442365 1 0.0191619694232941 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065137 chr6:27065142 . . 0 26 hm5C_associated_SNPs_6029 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065141 + 27065121 27065161 41 AATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACCCT AATCCATTGTGCTCTGCACGCATGGGTTCGAATCCCACCCT < 41bp 1 0.782439240335944 1 0.428580850362778 experiment 0.435121519328112 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065141 chr6:27065142 . . 0 22 hm5C_associated_SNPs_6030 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065149 + 27065129 27065169 41 GTGCTCTGCACGCGTGGGTTCGAATCCCACCCTCGTCGGGG GTGCTCTGCACGCATGGGTTCGAATCCCACCCTCGTCGGGG < 41bp 1 0.214683054476612 1 0.0814368426799774 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065149 chr6:27065142 . . 0 14 hm5C_associated_SNPs_6031 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065154 + 27065134 27065174 41 CTGCACGCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGT CTGCACGCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGT < 41bp 1 0.0687844948925469 1 0.0678858458995819 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065154 chr6:27065142 . . 0 9 hm5C_associated_SNPs_6032 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065155 + 27065135 27065175 41 TGCACGCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTC TGCACGCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTC < 41bp 1 0.127020618883325 1 0.0687984228134155 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065155 chr6:27065142 . . 0 8 hm5C_associated_SNPs_6033 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065156 + 27065136 27065176 41 GCACGCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCT GCACGCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCT < 41bp 1 0.435282127181572 1 0.0573811829090118 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065156 chr6:27065142 . . 0 7 hm5C_associated_SNPs_6034 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065158 + 27065138 27065178 41 ACGCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTT ACGCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTT < 41bp 1 0.0907735445134792 1 0.0399582087993622 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065158 chr6:27065142 . . 0 5 hm5C_associated_SNPs_6035 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065159 + 27065139 27065179 41 CGCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTT CGCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTT < 41bp 1 0.0825181266387513 1 0.045876532793045 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065159 chr6:27065142 . . 0 4 hm5C_associated_SNPs_6036 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065160 + 27065140 27065180 41 GCGTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTTA GCATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTTA < 41bp 1 0.496988968985655 1 0.348094522953033 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065160 chr6:27065142 . . 0 3 hm5C_associated_SNPs_6037 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27065142 27065142 1 + G A rs562915878 27065162 + 27065142 27065182 41 GTGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTTAAT ATGGGTTCGAATCCCACCCTCGTCGGGGGAGGTCTTTTAAT < 41bp 1 0.300385955902374 1 0.775740146636963 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00240;HIST1H2BJ ENSG00000219770;ENSG00000222800 intergenic Human other chr6:27065162 chr6:27065142 . . 0 1 hm5C_associated_SNPs_6038 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27065060-27065180
64251 chr6 27101054 27101054 1 + C T rs55867104 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGTAACGCGGCCCGCGACAACAAGAAGACCC < 41bp 1 0.338711031013904 1 0.357267677783966 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101054 synonymous SNV . 0 13 hm5C_associated_SNPs_6039 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101054 27101054 1 + C T rs55867104 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGTAACGCGGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.366647226835072 1 0.192930907011032 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101054 synonymous SNV . 0 12 hm5C_associated_SNPs_6040 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101057 27101057 1 + C T rs559397552 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGCAATGCGGCCCGCGACAACAA < 41bp 1 0.355213113589159 1 0.382006227970123 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101057 synonymous SNV . 0 24 hm5C_associated_SNPs_6041 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101057 27101057 1 + C T rs559397552 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAATGCGGCCCGCGACAACAAGAAGACCC < 41bp 1 0.361418967040456 1 0.35314017534256 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101057 synonymous SNV . 0 16 hm5C_associated_SNPs_6042 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101057 27101057 1 + C T rs559397552 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAATGCGGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.399581290970395 1 0.217267006635666 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101057 synonymous SNV . 0 15 hm5C_associated_SNPs_6043 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101057 27101057 1 + C T rs559397552 27101066 + 27101046 27101086 41 CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCAT CTGGCGGGCAATGCGGCCCGCGACAACAAGAAGACCCGCAT < 41bp 1 0.775363207984498 1 0.577091872692108 experiment 0.449273584031004 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101066 chr6:27101057 synonymous SNV . 0 12 hm5C_associated_SNPs_6044 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27130075 27130075 1 + C T rs191548026 27130060 + 27130040 27130080 41 GCCCAACAGGGGCCCTGTGGCTTAGCTGGTCAAAGCGCCTG GCCCAACAGGGGCCCTGTGGCTTAGCTGGTCAAAGTGCCTG < 41bp 1 0.306814637428396 1 0.158339262008667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130060 chr6:27130075 . . 0 36 hm5C_associated_SNPs_6045 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27130075 27130075 1 + C T rs191548026 27130065 + 27130045 27130085 41 ACAGGGGCCCTGTGGCTTAGCTGGTCAAAGCGCCTGTCTAG ACAGGGGCCCTGTGGCTTAGCTGGTCAAAGTGCCTGTCTAG < 41bp 1 0.689068232947996 1 0.578143656253815 experiment 0.621863534104008 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130065 chr6:27130075 . . 0 31 hm5C_associated_SNPs_6046 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27130075 27130075 1 + C T rs191548026 27130070 + 27130050 27130090 41 GGCCCTGTGGCTTAGCTGGTCAAAGCGCCTGTCTAGTAAAC GGCCCTGTGGCTTAGCTGGTCAAAGTGCCTGTCTAGTAAAC < 41bp 1 0.356132591557044 1 0.169841438531876 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130070 chr6:27130075 . . 0 26 hm5C_associated_SNPs_6047 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27130075 27130075 1 + C T rs191548026 27130077 + 27130057 27130097 41 TGGCTTAGCTGGTCAAAGCGCCTGTCTAGTAAACAGGAGAT TGGCTTAGCTGGTCAAAGTGCCTGTCTAGTAAACAGGAGAT < 41bp 1 0.13037192821988 1 0.116976529359818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130077 chr6:27130075 . . 0 19 hm5C_associated_SNPs_6048 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27130075 27130075 1 + C T rs191548026 27130078 + 27130058 27130098 41 GGCTTAGCTGGTCAAAGCGCCTGTCTAGTAAACAGGAGATC GGCTTAGCTGGTCAAAGTGCCTGTCTAGTAAACAGGAGATC < 41bp 1 0.137790726721899 1 0.0508718192577362 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130078 chr6:27130075 . . 0 18 hm5C_associated_SNPs_6049 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27130075 27130075 1 + C T rs191548026 27130082 + 27130062 27130102 41 TAGCTGGTCAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG TAGCTGGTCAAAGTGCCTGTCTAGTAAACAGGAGATCCTGG < 41bp 1 0.378894160466221 1 0.228995859622955 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27130082 chr6:27130075 . . 0 14 hm5C_associated_SNPs_6050 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr6:27130040-27130080
64251 chr6 27177636 27177636 1 + G A rs112747787 27177638 + 27177618 27177658 41 CATTTAGAGGGCTGTGATGGCCGAGTGGTTAAGGCGTTGGA CATTTAGAGGGCTGTGATAGCCGAGTGGTTAAGGCGTTGGA < 41bp 1 0.424304198696059 1 0.412337481975555 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27177638 chr6:27177636 . . 0 19 hm5C_associated_SNPs_6051 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27177619-27177657
64251 chr6 27177636 27177636 1 + G A rs112747787 27177639 + 27177619 27177659 41 ATTTAGAGGGCTGTGATGGCCGAGTGGTTAAGGCGTTGGAC ATTTAGAGGGCTGTGATAGCCGAGTGGTTAAGGCGTTGGAC < 41bp 1 0.746087492524603 1 0.705167472362518 experiment 0.507825014950794 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27177639 chr6:27177636 . . 0 18 hm5C_associated_SNPs_6052 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27177619-27177657
64251 chr6 27183001 27183001 1 + T C rs560164807 27182986 + 27182966 27183006 41 ATGGATAACGCGTCTGACTACGGATCAGAAGATTCTAGGTT ATGGATAACGCGTCTGACTACGGATCAGAAGATTCCAGGTT < 41bp 1 0.44432431233838 1 0.424038201570511 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27182986 chr6:27183001 . . 0 36 hm5C_associated_SNPs_6053 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27182991 + 27182971 27183011 41 TAACGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACT TAACGCGTCTGACTACGGATCAGAAGATTCCAGGTTCGACT < 41bp 1 0.606217808737998 1 0.330902516841888 experiment 0.787564382524004 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27182991 chr6:27183001 . . 0 31 hm5C_associated_SNPs_6054 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183000 + 27182980 27183020 41 TGACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGG TGACTACGGATCAGAAGATTCCAGGTTCGACTCCTGGCTGG < 41bp 1 0.6379520874352 1 0.775086224079132 experiment 0.724095825129601 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183000 chr6:27183001 . . 0 22 hm5C_associated_SNPs_6055 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183007 + 27182987 27183027 41 GGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGGGT GGATCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGGGT < 41bp 1 0.16615994390729 1 0.256738901138306 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183007 chr6:27183001 . . 0 15 hm5C_associated_SNPs_6056 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183010 + 27182990 27183030 41 TCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGGGTGTT TCAGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGGGTGTT < 41bp 1 0.198391229087876 1 0.116011649370193 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183010 chr6:27183001 . . 0 12 hm5C_associated_SNPs_6057 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183012 + 27182992 27183032 41 AGAAGATTCTAGGTTCGACTCCTGGCTGGCTCGGGTGTTAA AGAAGATTCCAGGTTCGACTCCTGGCTGGCTCGGGTGTTAA < 41bp 1 0.142369192105403 1 0.117651104927063 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183012 chr6:27183001 . . 0 10 hm5C_associated_SNPs_6058 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183013 + 27182993 27183033 41 GAAGATTCTAGGTTCGACTCCTGGCTGGCTCGGGTGTTAAT GAAGATTCCAGGTTCGACTCCTGGCTGGCTCGGGTGTTAAT < 41bp 1 0.191200604452731 1 0.0423991084098816 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183013 chr6:27183001 . . 0 9 hm5C_associated_SNPs_6059 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183017 + 27182997 27183037 41 ATTCTAGGTTCGACTCCTGGCTGGCTCGGGTGTTAATCTTG ATTCCAGGTTCGACTCCTGGCTGGCTCGGGTGTTAATCTTG < 41bp 1 0.287967027806185 1 0.14986115694046 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183017 chr6:27183001 . . 0 5 hm5C_associated_SNPs_6060 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27183001 27183001 1 + T C rs560164807 27183021 + 27183001 27183041 41 TAGGTTCGACTCCTGGCTGGCTCGGGTGTTAATCTTGGCTT CAGGTTCGACTCCTGGCTGGCTCGGGTGTTAATCTTGGCTT < 41bp 1 0.510866372814612 1 0.516841351985931 experiment 0.978267254370776 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27183021 chr6:27183001 . . 0 1 hm5C_associated_SNPs_6061 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:27182980-27183020
64251 chr6 27203308 27203308 1 + A G rs79513035 27203312 + 27203292 27203332 41 CCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTGTCACGTTTGCCTAACACGCGAAAG < 41bp 1 0.117433582765078 1 0.113476783037186 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203312 chr6:27203308 . . 0 17 hm5C_associated_SNPs_6062 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27203280-27203320
64251 chr6 27203308 27203308 1 + A G rs79513035 27203319 + 27203299 27203339 41 GTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTGTCACGTTTGCCTAACACGCGAAAGGTCCCCG < 41bp 1 0.172126742425228 1 0.471859216690063 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203319 chr6:27203308 . . 0 10 hm5C_associated_SNPs_6063 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27203280-27203320
64251 chr6 27203319 27203319 1 + C A rs9468016 27203312 + 27203292 27203332 41 CCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTTGCATAACACGCGAAAG < 41bp 1 0.136443851196675 1 0.147129118442535 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203312 chr6:27203319 . . 0 28 hm5C_associated_SNPs_6064 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27203280-27203320
64251 chr6 27203332 27203332 1 + G A rs183802162 27203312 + 27203292 27203332 41 CCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAG CCGTAGTGTAGTGGTTATCACGTTTGCCTAACACGCGAAAA < 41bp 1 0.13466713965844 1 0.0986205339431763 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203312 chr6:27203332 . . 0 41 hm5C_associated_SNPs_6065 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr6:27203280-27203380
64251 chr6 27203332 27203332 1 + G A rs183802162 27203319 + 27203299 27203339 41 GTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTTGCCTAACACGCGAAAAGTCCCCG < 41bp 1 0.129694437774219 1 0.315549939870834 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203319 chr6:27203332 . . 0 34 hm5C_associated_SNPs_6066 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr6:27203280-27203380
64251 chr6 27203335 27203335 1 + C A rs72843641 27203319 + 27203299 27203339 41 GTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGTCCCCG GTAGTGGTTATCACGTTTGCCTAACACGCGAAAGGTACCCG < 41bp 1 0.131716251842401 1 0.290158957242966 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR3143;PRSS16 ENSG00000174572;ENSG00000112812 intergenic Human other chr6:27203319 chr6:27203335 . . 0 37 hm5C_associated_SNPs_6067 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr6:27203280-27203380
64251 chr6 27258410 27258410 1 + C T rs72839448 27258409 + 27258389 27258429 41 CCAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCAC CCAACGCAGCACACAGGTTTCTGTGGTGTAGTGGTTATCAC < 41bp 1 0.495683992417427 1 0.14733412861824 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258409 chr6:27258410 . . 0 22 hm5C_associated_SNPs_6068 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258410 27258410 1 + C T rs72839448 27258429 + 27258409 27258449 41 CCGTGGTGTAGTGGTTATCACATTCGCCTTACACGCGAAAG CTGTGGTGTAGTGGTTATCACATTCGCCTTACACGCGAAAG < 41bp 1 0.0938382976278178 1 0.182513743638992 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258429 chr6:27258410 . . 0 2 hm5C_associated_SNPs_6069 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258409 + 27258389 27258429 41 CCAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCAC CCAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCAT < 41bp 1 0.254881800190763 1 0.0738210678100586 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258409 chr6:27258429 . . 0 41 hm5C_associated_SNPs_6070 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258410 + 27258390 27258430 41 CAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCACA CAACGCAGCACACAGGTTTCCGTGGTGTAGTGGTTATCATA < 41bp 1 0.415682502067812 1 0.117243558168411 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258410 chr6:27258429 . . 0 40 hm5C_associated_SNPs_6071 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258433 + 27258413 27258453 41 GGTGTAGTGGTTATCACATTCGCCTTACACGCGAAAGGTCC GGTGTAGTGGTTATCATATTCGCCTTACACGCGAAAGGTCC < 41bp 1 0.48669051680153 1 0.402458608150482 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258433 chr6:27258429 . . 0 17 hm5C_associated_SNPs_6072 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258435 + 27258415 27258455 41 TGTAGTGGTTATCACATTCGCCTTACACGCGAAAGGTCCTC TGTAGTGGTTATCATATTCGCCTTACACGCGAAAGGTCCTC < 41bp 1 0.0993121430061449 1 0.214104980230331 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258435 chr6:27258429 . . 0 15 hm5C_associated_SNPs_6073 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258436 + 27258416 27258456 41 GTAGTGGTTATCACATTCGCCTTACACGCGAAAGGTCCTCG GTAGTGGTTATCATATTCGCCTTACACGCGAAAGGTCCTCG < 41bp 1 0.043941387420249 1 0.114063501358032 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258436 chr6:27258429 . . 0 14 hm5C_associated_SNPs_6074 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258440 + 27258420 27258460 41 TGGTTATCACATTCGCCTTACACGCGAAAGGTCCTCGGGTC TGGTTATCATATTCGCCTTACACGCGAAAGGTCCTCGGGTC < 41bp 1 0.414707220676892 1 0.22058030962944 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258440 chr6:27258429 . . 0 10 hm5C_associated_SNPs_6075 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27258429 27258429 1 + C T rs115729116 27258444 + 27258424 27258464 41 TATCACATTCGCCTTACACGCGAAAGGTCCTCGGGTCGAAA TATCATATTCGCCTTACACGCGAAAGGTCCTCGGGTCGAAA < 41bp 1 0.55145552991887 1 0.219224125146866 experiment 0.897088940162259 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27258444 chr6:27258429 . . 0 6 hm5C_associated_SNPs_6076 0 0 81 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27258380-27258480
64251 chr6 27261683 27261683 1 + C G rs557400837 27261674 + 27261654 27261694 41 AGCACAGATTTGCGGTCGGCCGGTTAGCTCAGTTGGTTAGA AGCACAGATTTGCGGTCGGCCGGTTAGCTGAGTTGGTTAGA < 41bp 1 0.217829162364453 1 0.200218766927719 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261674 chr6:27261683 . . 0 30 hm5C_associated_SNPs_6077 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261683 27261683 1 + C G rs557400837 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTGAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG < 41bp 1 0.378698972849095 1 0.111626714468002 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261683 . . 0 4 hm5C_associated_SNPs_6078 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261691 27261691 1 + T G rs184907678 27261674 + 27261654 27261694 41 AGCACAGATTTGCGGTCGGCCGGTTAGCTCAGTTGGTTAGA AGCACAGATTTGCGGTCGGCCGGTTAGCTCAGTTGGTGAGA < 41bp 1 0.245522843223711 1 0.163425296545029 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261674 chr6:27261691 . . 0 38 hm5C_associated_SNPs_6079 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261691 27261691 1 + T G rs184907678 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTGAGAGCGTGCTGCTACTAATGCCAGGGTCG < 41bp 1 0.447310722913602 1 0.108926713466644 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261691 . . 0 12 hm5C_associated_SNPs_6080 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261692 27261692 1 + A G rs145689087 27261674 + 27261654 27261694 41 AGCACAGATTTGCGGTCGGCCGGTTAGCTCAGTTGGTTAGA AGCACAGATTTGCGGTCGGCCGGTTAGCTCAGTTGGTTGGA < 41bp 1 0.242473110330044 1 0.165137231349945 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261674 chr6:27261692 . . 0 39 hm5C_associated_SNPs_6081 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261692 27261692 1 + A G rs145689087 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTGGAGCGTGCTGCTACTAATGCCAGGGTCG < 41bp 1 0.4715765219078 1 0.129121005535126 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261692 . . 0 13 hm5C_associated_SNPs_6082 0 0 48 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261706 27261706 1 + C T rs78232339 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTAGAGCGTGCTGCTATTAATGCCAGGGTCG < 41bp 1 0.445055479311161 1 0.0781458020210266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261706 . . 0 27 hm5C_associated_SNPs_6083 0 0 68 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261711 27261711 1 + G A rs559855431 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTAGAGCGTGCTGCTACTAATACCAGGGTCG < 41bp 1 0.373925326383457 1 0.113781452178955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261711 . . 0 32 hm5C_associated_SNPs_6084 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261711 27261711 1 + G A rs559855431 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATACCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG < 41bp 1 0.165736503012305 1 0.435107201337814 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261711 . . 0 5 hm5C_associated_SNPs_6085 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261713 27261713 1 + C T rs74715010 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCTAGGGTCG < 41bp 1 0.363142611724957 1 0.141044855117798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261713 . . 0 34 hm5C_associated_SNPs_6086 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261713 27261713 1 + C T rs74715010 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCTAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG < 41bp 1 0.157453168633016 1 0.3132643699646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261713 . . 0 7 hm5C_associated_SNPs_6087 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261716 27261716 1 + G C rs371781670 27261700 + 27261680 27261720 41 GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGGGTCG GCTCAGTTGGTTAGAGCGTGCTGCTACTAATGCCAGCGTCG < 41bp 1 0.377272872038494 1 0.105392247438431 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261700 chr6:27261716 . . 0 37 hm5C_associated_SNPs_6088 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261716 27261716 1 + G C rs371781670 27261713 + 27261693 27261733 41 GAGCGTGCTGCTACTAATGCCAGGGTCGAGGTTTCGATCCC GAGCGTGCTGCTACTAATGCCAGCGTCGAGGTTTCGATCCC < 41bp 1 0.687162492253755 1 0.270458161830902 experiment 0.625675015492489 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261713 chr6:27261716 . . 0 24 hm5C_associated_SNPs_6089 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261716 27261716 1 + G C rs371781670 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCCAGCGTCGAGGTTTCGATCCCCGTACGGGCCTTTG < 41bp 1 0.157668805783911 1 0.245137065649033 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261716 . . 0 10 hm5C_associated_SNPs_6090 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr6 27261721 27261721 1 + A C rs568480121 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCCAGGGTCGCGGTTTCGATCCCCGTACGGGCCTTTG < 41bp 1 0.181830416922987 1 0.291106790304184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261721 . . 0 15 hm5C_associated_SNPs_6091 0 0 63 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261733 27261733 1 + C T rs545997296 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCCAGGGTCGAGGTTTCGATCCTCGTACGGGCCTTTG < 41bp 1 0.215523892642412 1 0.206825315952301 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261733 . . 0 27 hm5C_associated_SNPs_6092 0 0 59 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261733 27261733 1 + C T rs545997296 27261743 + 27261723 27261763 41 GTTTCGATCCCCGTACGGGCCTTTGGCTTTTTCCCCCCTCG GTTTCGATCCTCGTACGGGCCTTTGGCTTTTTCCCCCCTCG < 41bp 1 0.151105954139596 1 0.0807064473628998 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261743 chr6:27261733 . . 0 11 hm5C_associated_SNPs_6093 0 0 59 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261735 27261735 1 + G A rs11966985 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCCAGGGTCGAGGTTTCGATCCCCATACGGGCCTTTG < 41bp 1 0.159905113646818 1 0.351344406604767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261735 . . 0 29 hm5C_associated_SNPs_6094 0 0 58 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261735 27261735 1 + G A rs11966985 27261743 + 27261723 27261763 41 GTTTCGATCCCCGTACGGGCCTTTGGCTTTTTCCCCCCTCG GTTTCGATCCCCATACGGGCCTTTGGCTTTTTCCCCCCTCG < 41bp 1 0.121471664086418 1 0.0364600419998169 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261743 chr6:27261735 . . 0 13 hm5C_associated_SNPs_6095 0 0 58 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261738 27261738 1 + C G rs142746360 27261727 + 27261707 27261747 41 TAATGCCAGGGTCGAGGTTTCGATCCCCGTACGGGCCTTTG TAATGCCAGGGTCGAGGTTTCGATCCCCGTAGGGGCCTTTG < 41bp 1 0.183428100461615 1 0.466518968343735 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261727 chr6:27261738 . . 0 32 hm5C_associated_SNPs_6096 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27261738 27261738 1 + C G rs142746360 27261743 + 27261723 27261763 41 GTTTCGATCCCCGTACGGGCCTTTGGCTTTTTCCCCCCTCG GTTTCGATCCCCGTAGGGGCCTTTGGCTTTTTCCCCCCTCG < 41bp 1 0.192636329397779 1 0.0965715944766998 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261743 chr6:27261738 . . 0 16 hm5C_associated_SNPs_6097 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr6:27261640-27261760
64251 chr6 27263215 27263215 1 + T A rs563865270 27263216 + 27263196 27263236 41 TGCTAGTTCAGCTTCAGGTTCCATGGTGTAATGGTTAGCAC TGCTAGTTCAGCTTCAGGTACCATGGTGTAATGGTTAGCAC < 41bp 1 0.0919322233732722 1 0.0497441291809082 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263216 chr6:27263215 . . 0 20 hm5C_associated_SNPs_6098 0 0 21 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263215 27263215 1 + T A rs563865270 27263217 + 27263197 27263237 41 GCTAGTTCAGCTTCAGGTTCCATGGTGTAATGGTTAGCACT GCTAGTTCAGCTTCAGGTACCATGGTGTAATGGTTAGCACT < 41bp 1 0.278497261494344 1 0.355110764503479 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263217 chr6:27263215 . . 0 19 hm5C_associated_SNPs_6099 0 0 21 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263215 27263215 1 + T A rs563865270 27263234 + 27263214 27263254 41 TTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGG TACCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGG < 41bp 1 0.0832987633297635 1 0.084241509437561 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263234 chr6:27263215 . . 0 2 hm5C_associated_SNPs_6100 0 0 21 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263218 27263218 1 + A C rs142451802 27263216 + 27263196 27263236 41 TGCTAGTTCAGCTTCAGGTTCCATGGTGTAATGGTTAGCAC TGCTAGTTCAGCTTCAGGTTCCCTGGTGTAATGGTTAGCAC < 41bp 1 0.125075578382311 1 0.0519613921642303 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263216 chr6:27263218 . . 0 23 hm5C_associated_SNPs_6101 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263218 27263218 1 + A C rs142451802 27263217 + 27263197 27263237 41 GCTAGTTCAGCTTCAGGTTCCATGGTGTAATGGTTAGCACT GCTAGTTCAGCTTCAGGTTCCCTGGTGTAATGGTTAGCACT < 41bp 1 0.101024423230051 1 0.176293849945068 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263217 chr6:27263218 . . 0 22 hm5C_associated_SNPs_6102 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263218 27263218 1 + A C rs142451802 27263234 + 27263214 27263254 41 TTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGG TTCCCTGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGG < 41bp 1 0.0872456711275381 1 0.0604392886161804 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263234 chr6:27263218 . . 0 5 hm5C_associated_SNPs_6103 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263218 27263218 1 + A C rs142451802 27263236 + 27263216 27263256 41 CCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTA CCCTGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTA < 41bp 1 0.292483709790158 1 0.254900813102722 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263236 chr6:27263218 . . 0 3 hm5C_associated_SNPs_6104 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263218 27263218 1 + A C rs142451802 27263238 + 27263218 27263258 41 ATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTAAT CTGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTAAT < 41bp 1 0.777277274774762 1 0.794240474700928 experiment 0.445445450450476 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263238 chr6:27263218 . . 0 1 hm5C_associated_SNPs_6105 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:27263200-27263220
64251 chr6 27263252 27263252 1 + C T rs16897345 27263234 + 27263214 27263254 41 TTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGG TTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCTGG < 41bp 1 0.0871727794261705 1 0.0493232905864716 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263234 chr6:27263252 . . 0 39 hm5C_associated_SNPs_6106 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263236 + 27263216 27263256 41 CCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTA CCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCTGGTA < 41bp 1 0.261246863494754 1 0.211858361959457 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263236 chr6:27263252 . . 0 37 hm5C_associated_SNPs_6107 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263238 + 27263218 27263258 41 ATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCGGTAAT ATGGTGTAATGGTTAGCACTCTGGACTCTGAATCTGGTAAT < 41bp 1 0.781710297534789 1 0.634023487567902 experiment 0.436579404930421 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263238 chr6:27263252 . . 0 35 hm5C_associated_SNPs_6108 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263243 + 27263223 27263263 41 GTAATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCGAG GTAATGGTTAGCACTCTGGACTCTGAATCTGGTAATCCGAG < 41bp 1 0.0919356630408549 1 0.0619685053825378 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263243 chr6:27263252 . . 0 30 hm5C_associated_SNPs_6109 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263245 + 27263225 27263265 41 AATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCGAGTT AATGGTTAGCACTCTGGACTCTGAATCTGGTAATCCGAGTT < 41bp 1 0.608520545091136 1 0.86541473865509 experiment 0.782958909817729 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263245 chr6:27263252 . . 0 28 hm5C_associated_SNPs_6110 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263251 + 27263231 27263271 41 TAGCACTCTGGACTCTGAATCCGGTAATCCGAGTTCAAATC TAGCACTCTGGACTCTGAATCTGGTAATCCGAGTTCAAATC < 41bp 1 0.44989484929173 1 0.695084452629089 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263251 chr6:27263252 . . 0 22 hm5C_associated_SNPs_6111 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263259 + 27263239 27263279 41 TGGACTCTGAATCCGGTAATCCGAGTTCAAATCTCGGTGGA TGGACTCTGAATCTGGTAATCCGAGTTCAAATCTCGGTGGA < 41bp 1 0.406265824711999 1 0.864916324615479 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263259 chr6:27263252 . . 0 14 hm5C_associated_SNPs_6112 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263260 + 27263240 27263280 41 GGACTCTGAATCCGGTAATCCGAGTTCAAATCTCGGTGGAA GGACTCTGAATCTGGTAATCCGAGTTCAAATCTCGGTGGAA < 41bp 1 0.408470785243323 1 0.429169297218323 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263260 chr6:27263252 . . 0 13 hm5C_associated_SNPs_6113 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263266 + 27263246 27263286 41 TGAATCCGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGG TGAATCTGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGG < 41bp 1 0.166813151263741 1 0.209116369485855 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263266 chr6:27263252 . . 0 7 hm5C_associated_SNPs_6114 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263252 27263252 1 + C T rs16897345 27263271 + 27263251 27263291 41 CCGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGGATTTA CTGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGGATTTA < 41bp 1 0.705319962551973 1 0.936153173446655 experiment 0.589360074896054 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263271 chr6:27263252 . . 0 2 hm5C_associated_SNPs_6115 0 0 38 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27263200-27263260
64251 chr6 27263261 27263261 1 + G A rs114618853 27263243 + 27263223 27263263 41 GTAATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCGAG GTAATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCAAG < 41bp 1 0.0961906386994189 1 0.0794002115726471 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263243 chr6:27263261 . . 0 39 hm5C_associated_SNPs_6116 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263245 + 27263225 27263265 41 AATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCGAGTT AATGGTTAGCACTCTGGACTCTGAATCCGGTAATCCAAGTT < 41bp 1 0.604742781815466 1 0.853984475135803 experiment 0.790514436369068 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263245 chr6:27263261 . . 0 37 hm5C_associated_SNPs_6117 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263251 + 27263231 27263271 41 TAGCACTCTGGACTCTGAATCCGGTAATCCGAGTTCAAATC TAGCACTCTGGACTCTGAATCCGGTAATCCAAGTTCAAATC < 41bp 1 0.278916002003108 1 0.402924120426178 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263251 chr6:27263261 . . 0 31 hm5C_associated_SNPs_6118 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263252 + 27263232 27263272 41 AGCACTCTGGACTCTGAATCCGGTAATCCGAGTTCAAATCT AGCACTCTGGACTCTGAATCCGGTAATCCAAGTTCAAATCT < 41bp 1 0.630979495686849 1 0.594524085521698 experiment 0.738041008626302 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263252 chr6:27263261 . . 0 30 hm5C_associated_SNPs_6119 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263259 + 27263239 27263279 41 TGGACTCTGAATCCGGTAATCCGAGTTCAAATCTCGGTGGA TGGACTCTGAATCCGGTAATCCAAGTTCAAATCTCGGTGGA < 41bp 1 0.284693486075026 1 0.81394499540329 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263259 chr6:27263261 . . 0 23 hm5C_associated_SNPs_6120 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263260 + 27263240 27263280 41 GGACTCTGAATCCGGTAATCCGAGTTCAAATCTCGGTGGAA GGACTCTGAATCCGGTAATCCAAGTTCAAATCTCGGTGGAA < 41bp 1 0.366321877667024 1 0.474271684885025 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263260 chr6:27263261 . . 0 22 hm5C_associated_SNPs_6121 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263266 + 27263246 27263286 41 TGAATCCGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGG TGAATCCGGTAATCCAAGTTCAAATCTCGGTGGAACCTTGG < 41bp 1 0.170592800971414 1 0.287119686603546 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263266 chr6:27263261 . . 0 16 hm5C_associated_SNPs_6122 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263271 + 27263251 27263291 41 CCGGTAATCCGAGTTCAAATCTCGGTGGAACCTTGGATTTA CCGGTAATCCAAGTTCAAATCTCGGTGGAACCTTGGATTTA < 41bp 1 0.711063313315708 1 0.913801431655884 experiment 0.577873373368583 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263271 chr6:27263261 . . 0 11 hm5C_associated_SNPs_6123 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263273 + 27263253 27263293 41 GGTAATCCGAGTTCAAATCTCGGTGGAACCTTGGATTTAGT GGTAATCCAAGTTCAAATCTCGGTGGAACCTTGGATTTAGT < 41bp 1 0.34762546450129 1 0.45972529053688 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263273 chr6:27263261 . . 0 9 hm5C_associated_SNPs_6124 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27263261 27263261 1 + G A rs114618853 27263281 + 27263261 27263301 41 GAGTTCAAATCTCGGTGGAACCTTGGATTTAGTCCTCTGCA AAGTTCAAATCTCGGTGGAACCTTGGATTTAGTCCTCTGCA < 41bp 1 0.041619673206811 1 0.0604898929595947 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27263281 chr6:27263261 . . 0 1 hm5C_associated_SNPs_6125 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27263255-27263284
64251 chr6 27265776 27265776 1 + A G rs185033638 27265785 + 27265765 27265805 41 TCCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGA TCCCCAGAAGGGCGAGGTGGCCGAGTGGTTAAGGCGATGGA < 41bp 1 0.401370619181735 1 0.644881546497345 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265785 chr6:27265776 . . 0 12 hm5C_associated_SNPs_6126 0 0 53 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:27265760-27265780
64251 chr6 27265776 27265776 1 + A G rs185033638 27265786 + 27265766 27265806 41 CCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC CCCCAGAAGGGCGAGGTGGCCGAGTGGTTAAGGCGATGGAC < 41bp 1 0.741162778106495 1 0.853792309761047 experiment 0.51767444378701 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265786 chr6:27265776 . . 0 11 hm5C_associated_SNPs_6127 0 0 53 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:27265760-27265780
64251 chr6 27265777 27265777 1 + C A rs115817827 27265785 + 27265765 27265805 41 TCCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGA TCCCCAGAAGGAAGAGGTGGCCGAGTGGTTAAGGCGATGGA < 41bp 1 0.300045250554629 1 0.412859082221985 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265785 chr6:27265777 . . 0 13 hm5C_associated_SNPs_6128 0 0 53 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:27265760-27265780
64251 chr6 27265777 27265777 1 + C A rs115817827 27265786 + 27265766 27265806 41 CCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC CCCCAGAAGGAAGAGGTGGCCGAGTGGTTAAGGCGATGGAC < 41bp 1 0.696212033233059 1 0.840258598327637 experiment 0.607575933533882 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265786 chr6:27265777 . . 0 12 hm5C_associated_SNPs_6129 0 0 53 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:27265760-27265780
64251 chr6 27265791 27265791 1 + G A rs190170214 27265785 + 27265765 27265805 41 TCCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGA TCCCCAGAAGGACGAGGTGGCCGAGTAGTTAAGGCGATGGA < 41bp 1 0.353528421882484 1 0.254449963569641 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265785 chr6:27265791 . . 0 27 hm5C_associated_SNPs_6130 0 0 25 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265791 27265791 1 + G A rs190170214 27265786 + 27265766 27265806 41 CCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC CCCCAGAAGGACGAGGTGGCCGAGTAGTTAAGGCGATGGAC < 41bp 1 0.656370804321601 1 0.804619431495667 experiment 0.687258391356798 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265786 chr6:27265791 . . 0 26 hm5C_associated_SNPs_6131 0 0 25 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265791 27265791 1 + G A rs190170214 27265799 + 27265779 27265819 41 AGGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTG AGGTGGCCGAGTAGTTAAGGCGATGGACTGCTAATCCATTG < 41bp 1 0.528840687234368 1 0.257897615432739 experiment 0.942318625531264 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265799 chr6:27265791 . . 0 13 hm5C_associated_SNPs_6132 0 0 25 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265797 27265797 1 + G A rs1018372 27265785 + 27265765 27265805 41 TCCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGA TCCCCAGAAGGACGAGGTGGCCGAGTGGTTAAAGCGATGGA < 41bp 1 0.355235499018148 1 0.460408449172974 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265785 chr6:27265797 . . 0 33 hm5C_associated_SNPs_6133 0 0 22 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265797 27265797 1 + G A rs1018372 27265786 + 27265766 27265806 41 CCCCAGAAGGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC CCCCAGAAGGACGAGGTGGCCGAGTGGTTAAAGCGATGGAC < 41bp 1 0.720047968390706 1 0.810835957527161 experiment 0.559904063218588 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265786 chr6:27265797 . . 0 32 hm5C_associated_SNPs_6134 0 0 22 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265797 27265797 1 + G A rs1018372 27265799 + 27265779 27265819 41 AGGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTG AGGTGGCCGAGTGGTTAAAGCGATGGACTGCTAATCCATTG < 41bp 1 0.672289392634622 1 0.259947240352631 experiment 0.655421214730755 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265799 chr6:27265797 . . 0 19 hm5C_associated_SNPs_6135 0 0 22 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265797 27265797 1 + G A rs1018372 27265815 + 27265795 27265835 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG AAAGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG < 41bp 1 0.337677651546936 1 0.111444562673569 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265815 chr6:27265797 . . 0 3 hm5C_associated_SNPs_6136 0 0 22 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:27265766-27265797
64251 chr6 27265816 27265816 1 + A C rs546634500 27265799 + 27265779 27265819 41 AGGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCATTG AGGTGGCCGAGTGGTTAAGGCGATGGACTGCTAATCCCTTG < 41bp 1 0.635709070145472 1 0.448691666126251 experiment 0.728581859709055 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265799 chr6:27265816 . . 0 38 hm5C_associated_SNPs_6137 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265816 27265816 1 + A C rs546634500 27265815 + 27265795 27265835 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG AAGGCGATGGACTGCTAATCCCTTGTGCTCTGCACGCGTGG < 41bp 1 0.155028013506139 1 0.071927547454834 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265815 chr6:27265816 . . 0 22 hm5C_associated_SNPs_6138 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265816 27265816 1 + A C rs546634500 27265822 + 27265802 27265842 41 TGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAA TGGACTGCTAATCCCTTGTGCTCTGCACGCGTGGGTTCGAA < 41bp 1 0.177511547373693 1 0.116722524166107 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265822 chr6:27265816 . . 0 15 hm5C_associated_SNPs_6139 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265816 27265816 1 + A C rs546634500 27265824 + 27265804 27265844 41 GACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATC GACTGCTAATCCCTTGTGCTCTGCACGCGTGGGTTCGAATC < 41bp 1 0.710960893145065 1 0.373351722955704 experiment 0.57807821370987 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265824 chr6:27265816 . . 0 13 hm5C_associated_SNPs_6140 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265816 27265816 1 + A C rs546634500 27265827 + 27265807 27265847 41 TGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCA TGCTAATCCCTTGTGCTCTGCACGCGTGGGTTCGAATCCCA < 41bp 1 0.408260443371138 1 0.0230160057544708 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265827 chr6:27265816 . . 0 10 hm5C_associated_SNPs_6141 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265816 27265816 1 + A C rs546634500 27265831 + 27265811 27265851 41 AATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACCTT AATCCCTTGTGCTCTGCACGCGTGGGTTCGAATCCCACCTT < 41bp 1 0.785807553428547 1 0.603078365325928 experiment 0.428384893142905 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265831 chr6:27265816 . . 0 6 hm5C_associated_SNPs_6142 0 0 31 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:27265800-27265820
64251 chr6 27265827 27265827 1 + C G rs62401095 27265815 + 27265795 27265835 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG AAGGCGATGGACTGCTAATCCATTGTGCTCTGGACGCGTGG < 41bp 1 0.333329168170769 1 0.142294079065323 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265815 chr6:27265827 . . 0 33 hm5C_associated_SNPs_6143 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265827 27265827 1 + C G rs62401095 27265822 + 27265802 27265842 41 TGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAA TGGACTGCTAATCCATTGTGCTCTGGACGCGTGGGTTCGAA < 41bp 1 0.238464778411179 1 0.120771825313568 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265822 chr6:27265827 . . 0 26 hm5C_associated_SNPs_6144 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265827 27265827 1 + C G rs62401095 27265831 + 27265811 27265851 41 AATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACCTT AATCCATTGTGCTCTGGACGCGTGGGTTCGAATCCCACCTT < 41bp 1 0.7957541571184 1 0.493118464946747 experiment 0.4084916857632 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265831 chr6:27265827 . . 0 17 hm5C_associated_SNPs_6145 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265827 27265827 1 + C G rs62401095 27265839 + 27265819 27265859 41 GTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACC GTGCTCTGGACGCGTGGGTTCGAATCCCACCTTCGTCGACC < 41bp 1 0.279010607045835 1 0.134094029664993 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265839 chr6:27265827 . . 0 9 hm5C_associated_SNPs_6146 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265827 27265827 1 + C G rs62401095 27265844 + 27265824 27265864 41 CTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT CTGGACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT < 41bp 1 0.0922415746083389 1 0.0362120866775513 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265844 chr6:27265827 . . 0 4 hm5C_associated_SNPs_6147 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265827 27265827 1 + C G rs62401095 27265845 + 27265825 27265865 41 TGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC TGGACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC < 41bp 1 0.157952721828089 1 0.0784023106098175 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265845 chr6:27265827 . . 0 3 hm5C_associated_SNPs_6148 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265815 + 27265795 27265835 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG AAGGCGATGGACTGCTAATCCATTGTGCTCTGCAAGCGTGG < 41bp 1 0.296702330108909 1 0.0755375921726227 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265815 chr6:27265829 . . 0 35 hm5C_associated_SNPs_6149 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265822 + 27265802 27265842 41 TGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAA TGGACTGCTAATCCATTGTGCTCTGCAAGCGTGGGTTCGAA < 41bp 1 0.167232760832982 1 0.170415550470352 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265822 chr6:27265829 . . 0 28 hm5C_associated_SNPs_6150 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265824 + 27265804 27265844 41 GACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATC GACTGCTAATCCATTGTGCTCTGCAAGCGTGGGTTCGAATC < 41bp 1 0.699727498321946 1 0.38939905166626 experiment 0.600545003356108 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265824 chr6:27265829 . . 0 26 hm5C_associated_SNPs_6151 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265827 + 27265807 27265847 41 TGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCA TGCTAATCCATTGTGCTCTGCAAGCGTGGGTTCGAATCCCA < 41bp 1 0.346735328703777 1 0.0351614654064178 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265827 chr6:27265829 . . 0 23 hm5C_associated_SNPs_6152 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265839 + 27265819 27265859 41 GTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACC GTGCTCTGCAAGCGTGGGTTCGAATCCCACCTTCGTCGACC < 41bp 1 0.233187632069013 1 0.161881327629089 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265839 chr6:27265829 . . 0 11 hm5C_associated_SNPs_6153 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265844 + 27265824 27265864 41 CTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT CTGCAAGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT < 41bp 1 0.101323689367969 1 0.0555136501789093 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265844 chr6:27265829 . . 0 6 hm5C_associated_SNPs_6154 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265845 + 27265825 27265865 41 TGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC TGCAAGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC < 41bp 1 0.164662042197054 1 0.0918071568012238 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265845 chr6:27265829 . . 0 5 hm5C_associated_SNPs_6155 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265848 + 27265828 27265868 41 ACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTT AAGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTT < 41bp 1 0.0234708799471042 1 0.0279755592346191 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265848 chr6:27265829 . . 0 2 hm5C_associated_SNPs_6156 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265829 27265829 1 + C A rs544388252 27265849 + 27265829 27265869 41 CGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTA AGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTA < 41bp 1 0.18859734594066 1 0.0635500550270081 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265849 chr6:27265829 . . 0 1 hm5C_associated_SNPs_6157 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265815 + 27265795 27265835 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGTGG AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACGCGAGG < 41bp 1 0.296960651314082 1 0.164476662874222 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265815 chr6:27265833 . . 0 39 hm5C_associated_SNPs_6158 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265822 + 27265802 27265842 41 TGGACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAA TGGACTGCTAATCCATTGTGCTCTGCACGCGAGGGTTCGAA < 41bp 1 0.152371070175781 1 0.0723670423030853 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265822 chr6:27265833 . . 0 32 hm5C_associated_SNPs_6159 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265824 + 27265804 27265844 41 GACTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATC GACTGCTAATCCATTGTGCTCTGCACGCGAGGGTTCGAATC < 41bp 1 0.69694117549376 1 0.642159819602966 experiment 0.606117649012479 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265824 chr6:27265833 . . 0 30 hm5C_associated_SNPs_6160 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265827 + 27265807 27265847 41 TGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCA TGCTAATCCATTGTGCTCTGCACGCGAGGGTTCGAATCCCA < 41bp 1 0.353033254849365 1 0.018082469701767 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265827 chr6:27265833 . . 0 27 hm5C_associated_SNPs_6161 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265839 + 27265819 27265859 41 GTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACC GTGCTCTGCACGCGAGGGTTCGAATCCCACCTTCGTCGACC < 41bp 1 0.237118095727562 1 0.176946759223938 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265839 chr6:27265833 . . 0 15 hm5C_associated_SNPs_6162 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265844 + 27265824 27265864 41 CTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT CTGCACGCGAGGGTTCGAATCCCACCTTCGTCGACCGTTTT < 41bp 1 0.0860174403422403 1 0.0391269624233246 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265844 chr6:27265833 . . 0 10 hm5C_associated_SNPs_6163 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265845 + 27265825 27265865 41 TGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC TGCACGCGAGGGTTCGAATCCCACCTTCGTCGACCGTTTTC < 41bp 1 0.15278372024326 1 0.07760950922966 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265845 chr6:27265833 . . 0 9 hm5C_associated_SNPs_6164 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265848 + 27265828 27265868 41 ACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTT ACGCGAGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTT < 41bp 1 0.032497724775718 1 0.0269369184970856 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265848 chr6:27265833 . . 0 6 hm5C_associated_SNPs_6165 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265849 + 27265829 27265869 41 CGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTA CGCGAGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTA < 41bp 1 0.205165016986354 1 0.063259094953537 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265849 chr6:27265833 . . 0 5 hm5C_associated_SNPs_6166 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265833 27265833 1 + T A rs560864128 27265852 + 27265832 27265872 41 GTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTAAGA GAGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTAAGA < 41bp 1 0.150770510240395 1 0.292530477046967 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265852 chr6:27265833 . . 0 2 hm5C_associated_SNPs_6167 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr6 27265855 27265855 1 + C T rs184865702 27265839 + 27265819 27265859 41 GTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACC GTGCTCTGCACGCGTGGGTTCGAATCCCACCTTCGTTGACC < 41bp 1 0.204297079370242 1 0.0738458037376404 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265839 chr6:27265855 . . 0 37 hm5C_associated_SNPs_6168 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27265855 27265855 1 + C T rs184865702 27265844 + 27265824 27265864 41 CTGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTT CTGCACGCGTGGGTTCGAATCCCACCTTCGTTGACCGTTTT < 41bp 1 0.108309937935129 1 0.0532936751842499 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265844 chr6:27265855 . . 0 32 hm5C_associated_SNPs_6169 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27265855 27265855 1 + C T rs184865702 27265845 + 27265825 27265865 41 TGCACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTC TGCACGCGTGGGTTCGAATCCCACCTTCGTTGACCGTTTTC < 41bp 1 0.12495841359674 1 0.152981221675873 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265845 chr6:27265855 . . 0 31 hm5C_associated_SNPs_6170 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27265855 27265855 1 + C T rs184865702 27265848 + 27265828 27265868 41 ACGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTT ACGCGTGGGTTCGAATCCCACCTTCGTTGACCGTTTTCTTT < 41bp 1 0.0256233923810246 1 0.030068576335907 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265848 chr6:27265855 . . 0 28 hm5C_associated_SNPs_6171 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27265855 27265855 1 + C T rs184865702 27265849 + 27265829 27265869 41 CGCGTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTA CGCGTGGGTTCGAATCCCACCTTCGTTGACCGTTTTCTTTA < 41bp 1 0.222473138783518 1 0.0522549152374268 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265849 chr6:27265855 . . 0 27 hm5C_associated_SNPs_6172 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27265855 27265855 1 + C T rs184865702 27265852 + 27265832 27265872 41 GTGGGTTCGAATCCCACCTTCGTCGACCGTTTTCTTTAAGA GTGGGTTCGAATCCCACCTTCGTTGACCGTTTTCTTTAAGA < 41bp 1 0.0814767160996676 1 0.10913422703743 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265852 chr6:27265855 . . 0 24 hm5C_associated_SNPs_6173 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27265841-27265864
64251 chr6 27446596 27446596 1 + C T rs192190937 27446601 + 27446581 27446621 41 CTCCATTCGTGTAGTCGTGGCCGAGTGGTTAAGGCGATGGA CTCCATTCGTGTAGTTGTGGCCGAGTGGTTAAGGCGATGGA < 41bp 1 0.199043290536579 1 0.526579320430756 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446601 chr6:27446596 . . 0 16 hm5C_associated_SNPs_6174 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:27446580-27446600
64251 chr6 27446596 27446596 1 + C T rs192190937 27446615 + 27446595 27446635 41 TCGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTG TTGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTG < 41bp 1 0.551176267492941 1 0.430748373270035 experiment 0.897647465014119 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446615 chr6:27446596 . . 0 2 hm5C_associated_SNPs_6175 0 0 7 SSB POSTAR2 GSE95683,GSM2521599 chr6:27446580-27446600
64251 chr6 27446603 27446603 1 + G C rs560586012 27446601 + 27446581 27446621 41 CTCCATTCGTGTAGTCGTGGCCGAGTGGTTAAGGCGATGGA CTCCATTCGTGTAGTCGTGGCCCAGTGGTTAAGGCGATGGA < 41bp 1 0.125302286785245 1 0.24687334895134 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446601 chr6:27446603 . . 0 23 hm5C_associated_SNPs_6176 0 0 3 SSB POSTAR2 GSE95683,GSM2521599 chr6:27446583-27446613
64251 chr6 27446603 27446603 1 + G C rs560586012 27446615 + 27446595 27446635 41 TCGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTG TCGTGGCCCAGTGGTTAAGGCGATGGACTAGAAATCCATTG < 41bp 1 0.520141231197698 1 0.398706346750259 experiment 0.959717537604604 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27446615 chr6:27446603 . . 0 9 hm5C_associated_SNPs_6177 0 0 3 SSB POSTAR2 GSE95683,GSM2521599 chr6:27446583-27446613
64251 chr6 27463627 27463627 1 + G A rs147439337 27463617 + 27463597 27463637 41 TCGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTG TCGTGGCCGAGTGGTTAAGGCGATGGACTAAAAATCCATTG < 41bp 1 0.598307506973317 1 0.222923427820206 experiment 0.803384986053367 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463617 chr6:27463627 . . 0 31 hm5C_associated_SNPs_6178 0 0 1 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr6:27463620-27463640
64251 chr6 27463627 27463627 1 + G A rs147439337 27463624 + 27463604 27463644 41 CGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGGTCTC CGAGTGGTTAAGGCGATGGACTAAAAATCCATTGGGGTCTC < 41bp 1 0.594199680996634 1 0.313948094844818 experiment 0.811600638006731 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463624 chr6:27463627 . . 0 24 hm5C_associated_SNPs_6179 0 0 1 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr6:27463620-27463640
64251 chr6 27463634 27463634 1 + A C rs12211931 27463617 + 27463597 27463637 41 TCGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCATTG TCGTGGCCGAGTGGTTAAGGCGATGGACTAGAAATCCCTTG < 41bp 1 0.588372177473813 1 0.552698135375977 experiment 0.823255645052374 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463617 chr6:27463634 . . 0 38 hm5C_associated_SNPs_6180 0 0 1 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr6:27463620-27463640
64251 chr6 27463634 27463634 1 + A C rs12211931 27463624 + 27463604 27463644 41 CGAGTGGTTAAGGCGATGGACTAGAAATCCATTGGGGTCTC CGAGTGGTTAAGGCGATGGACTAGAAATCCCTTGGGGTCTC < 41bp 1 0.788479271641516 1 0.322039902210236 experiment 0.423041456716967 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463624 chr6:27463634 . . 0 31 hm5C_associated_SNPs_6181 0 0 1 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr6:27463620-27463640
64251 chr6 27463634 27463634 1 + A C rs12211931 27463649 + 27463629 27463669 41 AATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA AATCCCTTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA < 41bp 1 0.748732168920108 1 0.697990477085114 experiment 0.502535662159784 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27463649 chr6:27463634 . . 0 6 hm5C_associated_SNPs_6182 0 0 1 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr6:27463620-27463640
64251 chr6 27470859 27470859 1 + A C rs143290485 27470874 + 27470854 27470894 41 AATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA AATCCCTTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA < 41bp 1 0.6873719060712 1 0.697990477085114 experiment 0.6252561878576 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470874 chr6:27470859 . . 0 6 hm5C_associated_SNPs_6183 0 0 2 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27470840-27470860
64251 chr6 27470860 27470860 1 + T C rs184423987 27470874 + 27470854 27470894 41 AATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA AATCCACTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA < 41bp 1 0.731648967123382 1 0.784952580928802 experiment 0.536702065753236 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470874 chr6:27470860 . . 0 7 hm5C_associated_SNPs_6184 0 0 2 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:27470840-27470860
64251 chr6 27470871 27470871 1 + C A rs148315012 27470874 + 27470854 27470894 41 AATCCATTGGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGA AATCCATTGGGGTCTCCACGCGCAGGTTCGAATCCTGCCGA < 41bp 1 0.76942632697513 1 0.488401055335999 experiment 0.46114734604974 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470874 chr6:27470871 . . 0 18 hm5C_associated_SNPs_6185 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27470866-27470911
64251 chr6 27470871 27470871 1 + C A rs148315012 27470882 + 27470862 27470902 41 GGGGTCTCCCCGCGCAGGTTCGAATCCTGCCGACTACGAGT GGGGTCTCCACGCGCAGGTTCGAATCCTGCCGACTACGAGT < 41bp 1 0.137890348856108 1 0.0591928958892822 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470882 chr6:27470871 . . 0 10 hm5C_associated_SNPs_6186 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27470866-27470911
64251 chr6 27470871 27470871 1 + C A rs148315012 27470887 + 27470867 27470907 41 CTCCCCGCGCAGGTTCGAATCCTGCCGACTACGAGTTCGAG CTCCACGCGCAGGTTCGAATCCTGCCGACTACGAGTTCGAG < 41bp 1 0.0555497566079753 1 0.0549270510673523 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27470887 chr6:27470871 . . 0 5 hm5C_associated_SNPs_6187 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27470866-27470911
64251 chr6 27471548 27471548 1 + C A rs185973452 27471549 + 27471529 27471569 41 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGAC TTAGTATAGTGGTGAGTATACCCGCCTGTCACGCGGGAGAC < 41bp 1 0.412792783099513 1 0.0502713024616241 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471549 chr6:27471548 . . 0 20 hm5C_associated_SNPs_6188 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471516-27471552
64251 chr6 27471548 27471548 1 + C A rs185973452 27471550 + 27471530 27471570 41 TAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACC TAGTATAGTGGTGAGTATACCCGCCTGTCACGCGGGAGACC < 41bp 1 0.232575272225347 1 0.140576809644699 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471550 chr6:27471548 . . 0 19 hm5C_associated_SNPs_6189 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471516-27471552
64251 chr6 27471548 27471548 1 + C A rs185973452 27471553 + 27471533 27471573 41 TATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGG TATAGTGGTGAGTATACCCGCCTGTCACGCGGGAGACCGGG < 41bp 1 0.105736089047276 1 0.164466351270676 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471553 chr6:27471548 . . 0 16 hm5C_associated_SNPs_6190 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471516-27471552
64251 chr6 27471590 27471590 1 + G A rs60371651 27471577 + 27471557 27471597 41 TCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGAAA TCACGCGGGAGACCGGGGTTCGATTCCCCGACGAGGAGAAA < 41bp 1 0.179922999067894 1 0.209753751754761 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471577 chr6:27471590 . . 0 34 hm5C_associated_SNPs_6191 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471590 27471590 1 + G A rs60371651 27471583 + 27471563 27471603 41 GGGAGACCGGGGTTCGATTCCCCGACGGGGAGAAAAGTTGC GGGAGACCGGGGTTCGATTCCCCGACGAGGAGAAAAGTTGC < 41bp 1 0.752453379749905 1 0.761960029602051 experiment 0.49509324050019 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471583 chr6:27471590 . . 0 28 hm5C_associated_SNPs_6192 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471590 27471590 1 + G A rs60371651 27471584 + 27471564 27471604 41 GGAGACCGGGGTTCGATTCCCCGACGGGGAGAAAAGTTGCT GGAGACCGGGGTTCGATTCCCCGACGAGGAGAAAAGTTGCT < 41bp 1 0.213178031162101 1 0.660477876663208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471584 chr6:27471590 . . 0 27 hm5C_associated_SNPs_6193 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471590 27471590 1 + G A rs60371651 27471588 + 27471568 27471608 41 ACCGGGGTTCGATTCCCCGACGGGGAGAAAAGTTGCTTTTT ACCGGGGTTCGATTCCCCGACGAGGAGAAAAGTTGCTTTTT < 41bp 1 0.678304059311035 1 0.770912945270538 experiment 0.64339188137793 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471588 chr6:27471590 . . 0 23 hm5C_associated_SNPs_6194 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471592 27471592 1 + G A rs569356375 27471577 + 27471557 27471597 41 TCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGAAA TCACGCGGGAGACCGGGGTTCGATTCCCCGACGGGAAGAAA < 41bp 1 0.182089890070585 1 0.154238224029541 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471577 chr6:27471592 . . 0 36 hm5C_associated_SNPs_6195 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471592 27471592 1 + G A rs569356375 27471583 + 27471563 27471603 41 GGGAGACCGGGGTTCGATTCCCCGACGGGGAGAAAAGTTGC GGGAGACCGGGGTTCGATTCCCCGACGGGAAGAAAAGTTGC < 41bp 1 0.756334230212164 1 0.517972111701965 experiment 0.487331539575673 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471583 chr6:27471592 . . 0 30 hm5C_associated_SNPs_6196 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27471592 27471592 1 + G A rs569356375 27471584 + 27471564 27471604 41 GGAGACCGGGGTTCGATTCCCCGACGGGGAGAAAAGTTGCT GGAGACCGGGGTTCGATTCCCCGACGGGAAGAAAAGTTGCT < 41bp 1 0.187078456933762 1 0.520667195320129 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000096654;ENSG00000270666 intergenic Human other chr6:27471584 chr6:27471592 . . 0 29 hm5C_associated_SNPs_6197 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:27471560-27471600
64251 chr6 27487319 27487319 1 + G A rs138613254 27487312 + 27487292 27487332 41 ACACGAGCTATTGCGAGGTTCCATGGTGTAATGGTTAGCAC ACACGAGCTATTGCGAGGTTCCATGGTATAATGGTTAGCAC < 41bp 1 0.165198260570712 1 0.455293774604797 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487312 chr6:27487319 . . 0 28 hm5C_associated_SNPs_6198 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27487280-27487320
64251 chr6 27487319 27487319 1 + G A rs138613254 27487313 + 27487293 27487333 41 CACGAGCTATTGCGAGGTTCCATGGTGTAATGGTTAGCACT CACGAGCTATTGCGAGGTTCCATGGTATAATGGTTAGCACT < 41bp 1 0.368934361983034 1 0.732790350914001 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487313 chr6:27487319 . . 0 27 hm5C_associated_SNPs_6199 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27487280-27487320
64251 chr6 27487319 27487319 1 + G A rs138613254 27487330 + 27487310 27487350 41 TTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAG TTCCATGGTATAATGGTTAGCACTCTGGACTCTGAATCCAG < 41bp 1 0.128292562026061 1 0.0308953821659088 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487330 chr6:27487319 . . 0 10 hm5C_associated_SNPs_6200 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27487280-27487320
64251 chr6 27487319 27487319 1 + G A rs138613254 27487332 + 27487312 27487352 41 CCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCG CCATGGTATAATGGTTAGCACTCTGGACTCTGAATCCAGCG < 41bp 1 0.331341272231484 1 0.130578935146332 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487332 chr6:27487319 . . 0 8 hm5C_associated_SNPs_6201 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27487280-27487320
64251 chr6 27487319 27487319 1 + G A rs138613254 27487339 + 27487319 27487359 41 GTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAG ATAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAG < 41bp 1 0.173696593605047 1 0.0455278158187866 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487339 chr6:27487319 . . 0 1 hm5C_associated_SNPs_6202 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr6:27487280-27487320
64251 chr6 27487367 27487367 1 + C A rs6923016 27487347 + 27487327 27487367 41 TAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATC TAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATA < 41bp 1 0.184380860926755 1 0.739220142364502 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487347 chr6:27487367 . . 0 41 hm5C_associated_SNPs_6203 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487348 + 27487328 27487368 41 AGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCT AGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATAT < 41bp 1 0.75674197182313 1 0.465895682573318 experiment 0.486516056353741 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487348 chr6:27487367 . . 0 40 hm5C_associated_SNPs_6204 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487351 + 27487331 27487371 41 ACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGG ACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATATCGG < 41bp 1 0.05107418129259 1 0.123227745294571 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487351 chr6:27487367 . . 0 37 hm5C_associated_SNPs_6205 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487355 + 27487335 27487375 41 TGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGA TGGACTCTGAATCCAGCGATCCGAGTTCAAATATCGGTGGA < 41bp 1 0.368494295089834 1 0.857656240463257 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487355 chr6:27487367 . . 0 33 hm5C_associated_SNPs_6206 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487356 + 27487336 27487376 41 GGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAA GGACTCTGAATCCAGCGATCCGAGTTCAAATATCGGTGGAA < 41bp 1 0.320695979986703 1 0.324775218963623 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487356 chr6:27487367 . . 0 32 hm5C_associated_SNPs_6207 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487362 + 27487342 27487382 41 TGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCTGTC TGAATCCAGCGATCCGAGTTCAAATATCGGTGGAACCTGTC < 41bp 1 0.176157271884854 1 0.244864761829376 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487362 chr6:27487367 . . 0 26 hm5C_associated_SNPs_6208 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487369 + 27487349 27487389 41 AGCGATCCGAGTTCAAATCTCGGTGGAACCTGTCGTTTCTT AGCGATCCGAGTTCAAATATCGGTGGAACCTGTCGTTTCTT < 41bp 1 0.440504805021942 1 0.786972999572754 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487369 chr6:27487367 . . 0 19 hm5C_associated_SNPs_6209 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487377 + 27487357 27487397 41 GAGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTC GAGTTCAAATATCGGTGGAACCTGTCGTTTCTTCTTGCTTC < 41bp 1 0.0488507982784583 1 0.121004074811935 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487377 chr6:27487367 . . 0 11 hm5C_associated_SNPs_6210 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487367 27487367 1 + C A rs6923016 27487378 + 27487358 27487398 41 AGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTCC AGTTCAAATATCGGTGGAACCTGTCGTTTCTTCTTGCTTCC < 41bp 1 0.23885490218097 1 0.134367525577545 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487378 chr6:27487367 . . 0 10 hm5C_associated_SNPs_6211 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487377 27487377 1 + C G rs74776839 27487362 + 27487342 27487382 41 TGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCTGTC TGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAAGCTGTC < 41bp 1 0.141610017646069 1 0.261487543582916 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487362 chr6:27487377 . . 0 36 hm5C_associated_SNPs_6212 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487377 27487377 1 + C G rs74776839 27487369 + 27487349 27487389 41 AGCGATCCGAGTTCAAATCTCGGTGGAACCTGTCGTTTCTT AGCGATCCGAGTTCAAATCTCGGTGGAAGCTGTCGTTTCTT < 41bp 1 0.437339978175919 1 0.79893159866333 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487369 chr6:27487377 . . 0 29 hm5C_associated_SNPs_6213 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487377 27487377 1 + C G rs74776839 27487378 + 27487358 27487398 41 AGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTCC AGTTCAAATCTCGGTGGAAGCTGTCGTTTCTTCTTGCTTCC < 41bp 1 0.246059599437456 1 0.350682139396667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487378 chr6:27487377 . . 0 20 hm5C_associated_SNPs_6214 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487378 27487378 1 + C G rs185755837 27487362 + 27487342 27487382 41 TGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCTGTC TGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACGTGTC < 41bp 1 0.159696692347145 1 0.242927104234695 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487362 chr6:27487378 . . 0 37 hm5C_associated_SNPs_6215 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487378 27487378 1 + C G rs185755837 27487369 + 27487349 27487389 41 AGCGATCCGAGTTCAAATCTCGGTGGAACCTGTCGTTTCTT AGCGATCCGAGTTCAAATCTCGGTGGAACGTGTCGTTTCTT < 41bp 1 0.408218190591226 1 0.732324182987213 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487369 chr6:27487378 . . 0 30 hm5C_associated_SNPs_6216 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27487378 27487378 1 + C G rs185755837 27487377 + 27487357 27487397 41 GAGTTCAAATCTCGGTGGAACCTGTCGTTTCTTCTTGCTTC GAGTTCAAATCTCGGTGGAACGTGTCGTTTCTTCTTGCTTC < 41bp 1 0.160105078361658 1 0.547236502170563 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000270666;ENSG00000218347 intergenic Human other chr6:27487377 chr6:27487378 . . 0 22 hm5C_associated_SNPs_6217 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27487361-27487386
64251 chr6 27500039 27500039 1 + C G rs184632310 27500027 + 27500007 27500047 41 AAGGCGATGGACTAGAAATCCATTGGGGTTTCCCCACGCAG AAGGCGATGGACTAGAAATCCATTGGGGTTTCGCCACGCAG < 41bp 1 0.313402177831307 1 0.123077213764191 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27500027 chr6:27500039 . . 0 33 hm5C_associated_SNPs_6218 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27500021-27500044
64251 chr6 27500039 27500039 1 + C G rs184632310 27500038 + 27500018 27500058 41 CTAGAAATCCATTGGGGTTTCCCCACGCAGGTTCGAATCCT CTAGAAATCCATTGGGGTTTCGCCACGCAGGTTCGAATCCT < 41bp 1 0.732605778600084 1 0.871991276741028 experiment 0.534788442799832 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27500038 chr6:27500039 . . 0 22 hm5C_associated_SNPs_6219 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27500021-27500044
64251 chr6 27500039 27500039 1 + C G rs184632310 27500040 + 27500020 27500060 41 AGAAATCCATTGGGGTTTCCCCACGCAGGTTCGAATCCTGC AGAAATCCATTGGGGTTTCGCCACGCAGGTTCGAATCCTGC < 41bp 1 0.220643331429591 1 0.163944870233536 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27500040 chr6:27500039 . . 0 20 hm5C_associated_SNPs_6220 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27500021-27500044
64251 chr6 27500039 27500039 1 + C G rs184632310 27500043 + 27500023 27500063 41 AATCCATTGGGGTTTCCCCACGCAGGTTCGAATCCTGCCGA AATCCATTGGGGTTTCGCCACGCAGGTTCGAATCCTGCCGA < 41bp 1 0.697993144806907 1 0.357229948043823 experiment 0.604013710386186 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27500043 chr6:27500039 . . 0 17 hm5C_associated_SNPs_6221 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27500021-27500044
64251 chr6 27500039 27500039 1 + C G rs184632310 27500057 + 27500037 27500077 41 TCCCCACGCAGGTTCGAATCCTGCCGACTACGGTCCCTTTC TCGCCACGCAGGTTCGAATCCTGCCGACTACGGTCCCTTTC < 41bp 1 0.49660082960433 1 0.21793457865715 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27500057 chr6:27500039 . . 0 3 hm5C_associated_SNPs_6222 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27500021-27500044
64251 chr6 27513498 27513498 1 + A C rs148637877 27513478 + 27513458 27513498 41 GCGTAGGTAGGTAGTCGTGGCCGAGTGGTTAAGGCGATGGA GCGTAGGTAGGTAGTCGTGGCCGAGTGGTTAAGGCGATGGC < 41bp 1 0.327211807792379 1 0.355676114559174 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513478 chr6:27513498 . . 0 41 hm5C_associated_SNPs_6223 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:27513457-27513500
64251 chr6 27513498 27513498 1 + A C rs148637877 27513479 + 27513459 27513499 41 CGTAGGTAGGTAGTCGTGGCCGAGTGGTTAAGGCGATGGAC CGTAGGTAGGTAGTCGTGGCCGAGTGGTTAAGGCGATGGCC < 41bp 1 0.68925794328018 1 0.841057240962982 experiment 0.621484113439639 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513479 chr6:27513498 . . 0 40 hm5C_associated_SNPs_6224 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:27513457-27513500
64251 chr6 27543846 27543846 1 + A C rs538192693 27543856 + 27543836 27543876 41 TCGCAAAAGAACCTGGGTAGCTCAGTAGGTAGAACATCAGA TCGCAAAAGACCCTGGGTAGCTCAGTAGGTAGAACATCAGA < 41bp 1 0.398540835119705 1 0.143732815980911 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543856 chr6:27543846 . . 0 11 hm5C_associated_SNPs_6225 0 0 54 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:27543820-27543860
64251 chr6 27543876 27543876 1 + A G rs189859043 27543856 + 27543836 27543876 41 TCGCAAAAGAACCTGGGTAGCTCAGTAGGTAGAACATCAGA TCGCAAAAGAACCTGGGTAGCTCAGTAGGTAGAACATCAGG < 41bp 1 0.420745411599144 1 0.157519668340683 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543856 chr6:27543876 . . 0 41 hm5C_associated_SNPs_6226 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:27543837-27543881
64251 chr6 27543889 27543889 1 + G C rs151158399 27543901 + 27543881 27543921 41 TAATCTGAGGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTG TAATCTGACGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTG < 41bp 1 0.210443129587447 1 0.183209121227264 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543901 chr6:27543889 . . 0 9 hm5C_associated_SNPs_6227 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27543839-27543922
64251 chr6 27543889 27543889 1 + G C rs151158399 27543907 + 27543887 27543927 41 GAGGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTGAGTGTA GACGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTGAGTGTA < 41bp 1 0.0513405991859567 1 0.0742588341236115 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543907 chr6:27543889 . . 0 3 hm5C_associated_SNPs_6228 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27543839-27543922
64251 chr6 27543905 27543905 1 + T G rs139061161 27543901 + 27543881 27543921 41 TAATCTGAGGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTG TAATCTGAGGGTCTAGGGTTCAAGGCCCTGTCCAGGCGTTG < 41bp 1 0.456143093177539 1 0.665167570114136 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543901 chr6:27543905 . . 0 25 hm5C_associated_SNPs_6229 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27543839-27543922
64251 chr6 27543905 27543905 1 + T G rs139061161 27543907 + 27543887 27543927 41 GAGGGTCTAGGGTTCAAGTCCCTGTCCAGGCGTTGAGTGTA GAGGGTCTAGGGTTCAAGGCCCTGTCCAGGCGTTGAGTGTA < 41bp 1 0.0441095975217946 1 0.0827338993549347 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543907 chr6:27543905 . . 0 19 hm5C_associated_SNPs_6230 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27543839-27543922
64251 chr6 27543905 27543905 1 + T G rs139061161 27543913 + 27543893 27543933 41 CTAGGGTTCAAGTCCCTGTCCAGGCGTTGAGTGTAGTTTTG CTAGGGTTCAAGGCCCTGTCCAGGCGTTGAGTGTAGTTTTG < 41bp 1 0.405352558532342 1 0.748997569084167 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000219738;ENSG00000206671 intergenic Human other chr6:27543913 chr6:27543905 . . 0 13 hm5C_associated_SNPs_6231 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27543839-27543922
64251 chr6 27586150 27586150 1 + C A rs61415880 27586137 + 27586117 27586157 41 TAAGTTCAATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGA TAAGTTCAATTCTATCGTGGCCCTGTAGCTCAGAGGTTGGA < 41bp 1 0.0295382711445338 1 0.0207649767398834 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586137 chr6:27586150 . . 0 34 hm5C_associated_SNPs_6232 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586138 + 27586118 27586158 41 AAGTTCAATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAG AAGTTCAATTCTATCGTGGCCCTGTAGCTCAGAGGTTGGAG < 41bp 1 0.0465323950682163 1 0.0410124957561493 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586138 chr6:27586150 . . 0 33 hm5C_associated_SNPs_6233 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586139 + 27586119 27586159 41 AGTTCAATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGC AGTTCAATTCTATCGTGGCCCTGTAGCTCAGAGGTTGGAGC < 41bp 1 0.31747756366464 1 0.217263549566269 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586139 chr6:27586150 . . 0 32 hm5C_associated_SNPs_6234 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586145 + 27586125 27586165 41 ATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGT ATTCTATCGTGGCCCTGTAGCTCAGAGGTTGGAGCGCTGGT < 41bp 1 0.375328458537133 1 0.296696782112122 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586145 chr6:27586150 . . 0 26 hm5C_associated_SNPs_6235 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586147 + 27586127 27586167 41 TCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGTCT TCTATCGTGGCCCTGTAGCTCAGAGGTTGGAGCGCTGGTCT < 41bp 1 0.767989963621547 1 0.900429725646973 experiment 0.464020072756907 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586147 chr6:27586150 . . 0 24 hm5C_associated_SNPs_6236 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586159 + 27586139 27586179 41 CTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGG CTGTAGCTCAGAGGTTGGAGCGCTGGTCTCGTAAACCTAGG < 41bp 1 0.383556743117064 1 0.520032942295074 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586159 chr6:27586150 . . 0 12 hm5C_associated_SNPs_6237 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586161 + 27586141 27586181 41 GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG GTAGCTCAGAGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG < 41bp 1 0.587430699486028 1 0.198563754558563 experiment 0.825138601027944 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586161 chr6:27586150 . . 0 10 hm5C_associated_SNPs_6238 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGAGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG < 41bp 1 0.419183343959898 1 0.0646527111530304 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586150 . . 0 5 hm5C_associated_SNPs_6239 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586150 27586150 1 + C A rs61415880 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGAGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG < 41bp 1 0.51582782765835 1 0.253005594015121 experiment 0.968344344683301 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586150 . . 0 3 hm5C_associated_SNPs_6240 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586139 + 27586119 27586159 41 AGTTCAATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGC AGTTCAATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGT < 41bp 1 0.276105188096068 1 0.151944756507874 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586139 chr6:27586159 . . 0 41 hm5C_associated_SNPs_6241 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586145 + 27586125 27586165 41 ATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGT ATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGTGCTGGT < 41bp 1 0.344863494295548 1 0.393097013235092 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586145 chr6:27586159 . . 0 35 hm5C_associated_SNPs_6242 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586147 + 27586127 27586167 41 TCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGTCT TCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGTGCTGGTCT < 41bp 1 0.791745248480434 1 0.794060468673706 experiment 0.416509503039132 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586147 chr6:27586159 . . 0 33 hm5C_associated_SNPs_6243 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586150 + 27586130 27586170 41 ATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGT ATCGTGGCCCTGTAGCTCAGCGGTTGGAGTGCTGGTCTCGT < 41bp 1 0.170989192307939 1 0.830018639564514 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586150 chr6:27586159 . . 0 30 hm5C_associated_SNPs_6244 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586161 + 27586141 27586181 41 GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG GTAGCTCAGCGGTTGGAGTGCTGGTCTCGTAAACCTAGGGG < 41bp 1 0.59726289009793 1 0.260401248931885 experiment 0.805474219804139 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586161 chr6:27586159 . . 0 19 hm5C_associated_SNPs_6245 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGCGGTTGGAGTGCTGGTCTCGTAAACCTAGGGGTCGTG < 41bp 1 0.381172102032047 1 0.0793164074420929 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586159 . . 0 14 hm5C_associated_SNPs_6246 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGCGGTTGGAGTGCTGGTCTCGTAAACCTAGGGGTCGTGAG < 41bp 1 0.478005205617004 1 0.464753806591034 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586159 . . 0 12 hm5C_associated_SNPs_6247 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586174 + 27586154 27586194 41 TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA TGGAGTGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA < 41bp 1 0.137366017309459 1 0.278529852628708 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586174 chr6:27586159 . . 0 6 hm5C_associated_SNPs_6248 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586159 27586159 1 + C T rs145791158 27586175 + 27586155 27586195 41 GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT GGAGTGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT < 41bp 1 0.707125137354992 1 0.663653969764709 experiment 0.585749725290017 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586175 chr6:27586159 . . 0 5 hm5C_associated_SNPs_6249 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586165 27586165 1 + T C rs73383127 27586145 + 27586125 27586165 41 ATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGT ATTCTATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGC < 41bp 1 0.386406339019238 1 0.283381402492523 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586145 chr6:27586165 . . 0 41 hm5C_associated_SNPs_6250 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586150 + 27586130 27586170 41 ATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGT ATCGTGGCCCTGTAGCTCAGCGGTTGGAGCGCTGGCCTCGT < 41bp 1 0.246547437943254 1 0.841734290122986 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586150 chr6:27586165 . . 0 36 hm5C_associated_SNPs_6251 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586159 + 27586139 27586179 41 CTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGG CTGTAGCTCAGCGGTTGGAGCGCTGGCCTCGTAAACCTAGG < 41bp 1 0.350223505608713 1 0.730645537376404 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586159 chr6:27586165 . . 0 27 hm5C_associated_SNPs_6252 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586161 + 27586141 27586181 41 GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG GTAGCTCAGCGGTTGGAGCGCTGGCCTCGTAAACCTAGGGG < 41bp 1 0.523377028636246 1 0.452966570854187 experiment 0.953245942727508 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586161 chr6:27586165 . . 0 25 hm5C_associated_SNPs_6253 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGCGGTTGGAGCGCTGGCCTCGTAAACCTAGGGGTCGTG < 41bp 1 0.354988213483646 1 0.0562659204006195 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586165 . . 0 20 hm5C_associated_SNPs_6254 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGCGGTTGGAGCGCTGGCCTCGTAAACCTAGGGGTCGTGAG < 41bp 1 0.428804760972369 1 0.289747953414917 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586165 . . 0 18 hm5C_associated_SNPs_6255 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586174 + 27586154 27586194 41 TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA TGGAGCGCTGGCCTCGTAAACCTAGGGGTCGTGAGTTCAAA < 41bp 1 0.167239586784464 1 0.282210975885391 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586174 chr6:27586165 . . 0 12 hm5C_associated_SNPs_6256 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586175 + 27586155 27586195 41 GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT GGAGCGCTGGCCTCGTAAACCTAGGGGTCGTGAGTTCAAAT < 41bp 1 0.748043001245021 1 0.650065958499908 experiment 0.503913997509958 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586175 chr6:27586165 . . 0 11 hm5C_associated_SNPs_6257 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586165 27586165 1 + T C rs73383127 27586183 + 27586163 27586203 41 GGTCTCGTAAACCTAGGGGTCGTGAGTTCAAATCTCACCAG GGCCTCGTAAACCTAGGGGTCGTGAGTTCAAATCTCACCAG < 41bp 1 0.78031983629863 1 0.197396099567413 experiment 0.439360327402741 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586183 chr6:27586165 . . 0 3 hm5C_associated_SNPs_6258 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586159 + 27586139 27586179 41 CTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGG CTGTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTCGG < 41bp 1 0.500093421338286 1 0.519875586032867 experiment 0.999813157323429 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586159 chr6:27586177 . . 0 39 hm5C_associated_SNPs_6259 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586161 + 27586141 27586181 41 GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTCGGGG < 41bp 1 0.641351189675038 1 0.302769243717194 experiment 0.717297620649924 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586161 chr6:27586177 . . 0 37 hm5C_associated_SNPs_6260 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTCGGGGTCGTG < 41bp 1 0.400811436673463 1 0.042100578546524 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586177 . . 0 32 hm5C_associated_SNPs_6261 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGCGGTTGGAGCGCTGGTCTCGTAAACCTCGGGGTCGTGAG < 41bp 1 0.536895192611019 1 0.215261429548264 experiment 0.926209614777962 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586177 . . 0 30 hm5C_associated_SNPs_6262 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586174 + 27586154 27586194 41 TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA TGGAGCGCTGGTCTCGTAAACCTCGGGGTCGTGAGTTCAAA < 41bp 1 0.170600517842028 1 0.127139687538147 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586174 chr6:27586177 . . 0 24 hm5C_associated_SNPs_6263 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586177 27586177 1 + A C rs145281705 27586175 + 27586155 27586195 41 GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT GGAGCGCTGGTCTCGTAAACCTCGGGGTCGTGAGTTCAAAT < 41bp 1 0.7713661762032 1 0.681272029876709 experiment 0.4572676475936 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586175 chr6:27586177 . . 0 23 hm5C_associated_SNPs_6264 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27586160-27586180
64251 chr6 27586181 27586181 1 + G A rs9393829 27586161 + 27586141 27586181 41 GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGG GTAGCTCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGA < 41bp 1 0.595914215662306 1 0.376331448554993 experiment 0.808171568675389 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586161 chr6:27586181 . . 0 41 hm5C_associated_SNPs_6265 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586181 27586181 1 + G A rs9393829 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGATCGTG < 41bp 1 0.376959858138782 1 0.0995675921440125 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586181 . . 0 36 hm5C_associated_SNPs_6266 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586181 27586181 1 + G A rs9393829 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGATCGTGAG < 41bp 1 0.499482621254738 1 0.385249137878418 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586181 . . 0 34 hm5C_associated_SNPs_6267 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586181 27586181 1 + G A rs9393829 27586174 + 27586154 27586194 41 TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA TGGAGCGCTGGTCTCGTAAACCTAGGGATCGTGAGTTCAAA < 41bp 1 0.134824274968539 1 0.17254576086998 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586174 chr6:27586181 . . 0 28 hm5C_associated_SNPs_6268 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586181 27586181 1 + G A rs9393829 27586175 + 27586155 27586195 41 GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT GGAGCGCTGGTCTCGTAAACCTAGGGATCGTGAGTTCAAAT < 41bp 1 0.743499877592899 1 0.511045873165131 experiment 0.513000244814202 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586175 chr6:27586181 . . 0 27 hm5C_associated_SNPs_6269 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586186 27586186 1 + G A rs553749591 27586166 + 27586146 27586186 41 TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTG TCAGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTA < 41bp 1 0.396111655898383 1 0.0563017427921295 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586166 chr6:27586186 . . 0 41 hm5C_associated_SNPs_6270 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586186 27586186 1 + G A rs553749591 27586168 + 27586148 27586188 41 AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAG AGCGGTTGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTAAG < 41bp 1 0.485998765935944 1 0.266800045967102 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586168 chr6:27586186 . . 0 39 hm5C_associated_SNPs_6271 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586186 27586186 1 + G A rs553749591 27586174 + 27586154 27586194 41 TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAA TGGAGCGCTGGTCTCGTAAACCTAGGGGTCGTAAGTTCAAA < 41bp 1 0.152304183232028 1 0.345542371273041 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586174 chr6:27586186 . . 0 33 hm5C_associated_SNPs_6272 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586186 27586186 1 + G A rs553749591 27586175 + 27586155 27586195 41 GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTGAGTTCAAAT GGAGCGCTGGTCTCGTAAACCTAGGGGTCGTAAGTTCAAAT < 41bp 1 0.720529043482215 1 0.600896954536438 experiment 0.558941913035571 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586175 chr6:27586186 . . 0 32 hm5C_associated_SNPs_6273 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27586186 27586186 1 + G A rs553749591 27586183 + 27586163 27586203 41 GGTCTCGTAAACCTAGGGGTCGTGAGTTCAAATCTCACCAG GGTCTCGTAAACCTAGGGGTCGTAAGTTCAAATCTCACCAG < 41bp 1 0.622820363197463 1 0.228788405656815 experiment 0.754359273605074 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000206671;ENSG00000238648 intergenic Human other chr6:27586183 chr6:27586186 . . 0 24 hm5C_associated_SNPs_6274 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27586120-27586200
64251 chr6 27599288 27599288 1 + G A rs575300768 27599280 + 27599260 27599300 41 GCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTC GCCGAGGTTGTGAGTTCGAGCCTCACCTAGAGCATGTTTTC < 41bp 1 0.10445719066742 1 0.0360164046287537 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000238648 ncRNA_exonic Human other chr6:27599280 chr6:27599288 . . 0 29 hm5C_associated_SNPs_6275 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27599279-27599300
64251 chr6 27599290 27599290 1 + A C rs189697993 27599280 + 27599260 27599300 41 GCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTC GCCGAGGTTGTGAGTTCGAGCCTCACCTGGCGCATGTTTTC < 41bp 1 0.109001892440425 1 0.0350701212882996 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000238648 ncRNA_exonic Human other chr6:27599280 chr6:27599290 . . 0 31 hm5C_associated_SNPs_6276 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27599279-27599300
64251 chr6 27636378 27636378 1 + C A rs78149975 27636372 + 27636352 27636392 41 GCATTCGTGTGGCCGGTTAGCTCAGTCGGCTAGAGCGTGGT GCATTCGTGTGGCCGGTTAGCTCAGTAGGCTAGAGCGTGGT < 41bp 1 0.590497914729722 1 0.0772571265697479 experiment 0.819004170540557 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636372 chr6:27636378 . . 0 27 hm5C_associated_SNPs_6277 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27636361-27636379
64251 chr6 27636378 27636378 1 + C A rs78149975 27636387 + 27636367 27636407 41 GTTAGCTCAGTCGGCTAGAGCGTGGTGCTAATAACGCCAAG GTTAGCTCAGTAGGCTAGAGCGTGGTGCTAATAACGCCAAG < 41bp 1 0.731885567861312 1 0.712814509868622 experiment 0.536228864277376 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636387 chr6:27636378 . . 0 12 hm5C_associated_SNPs_6278 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27636361-27636379
64251 chr6 27636387 27636387 1 + C T rs149096466 27636372 + 27636352 27636392 41 GCATTCGTGTGGCCGGTTAGCTCAGTCGGCTAGAGCGTGGT GCATTCGTGTGGCCGGTTAGCTCAGTCGGCTAGAGTGTGGT < 41bp 1 0.490926608567119 1 0.139976680278778 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636372 chr6:27636387 . . 0 36 hm5C_associated_SNPs_6279 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636387 27636387 1 + C T rs149096466 27636374 + 27636354 27636394 41 ATTCGTGTGGCCGGTTAGCTCAGTCGGCTAGAGCGTGGTGC ATTCGTGTGGCCGGTTAGCTCAGTCGGCTAGAGTGTGGTGC < 41bp 1 0.43567970322438 1 0.263248920440674 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636374 chr6:27636387 . . 0 34 hm5C_associated_SNPs_6280 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636387 27636387 1 + C T rs149096466 27636381 + 27636361 27636401 41 TGGCCGGTTAGCTCAGTCGGCTAGAGCGTGGTGCTAATAAC TGGCCGGTTAGCTCAGTCGGCTAGAGTGTGGTGCTAATAAC < 41bp 1 0.788256081322549 1 0.356023520231247 experiment 0.423487837354902 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636381 chr6:27636387 . . 0 27 hm5C_associated_SNPs_6281 0 0 22 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636412 + 27636392 27636432 41 TGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG TGCTAATAACGCCAAGGTAGCGGGTTCGATCCCCGTACGGG < 41bp 1 0.741281666690008 1 0.730395793914795 experiment 0.517436666619985 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636412 chr6:27636410 . . 0 19 hm5C_associated_SNPs_6282 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636418 + 27636398 27636438 41 TAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCACTG TAACGCCAAGGTAGCGGGTTCGATCCCCGTACGGGCCACTG < 41bp 1 0.171632656182913 1 0.112334102392197 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636418 chr6:27636410 . . 0 13 hm5C_associated_SNPs_6283 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636423 + 27636403 27636443 41 CCAAGGTCGCGGGTTCGATCCCCGTACGGGCCACTGGATGC CCAAGGTAGCGGGTTCGATCCCCGTACGGGCCACTGGATGC < 41bp 1 0.522641419333052 1 0.488062173128128 experiment 0.954717161333897 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636423 chr6:27636410 . . 0 8 hm5C_associated_SNPs_6284 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636424 + 27636404 27636444 41 CAAGGTCGCGGGTTCGATCCCCGTACGGGCCACTGGATGCC CAAGGTAGCGGGTTCGATCCCCGTACGGGCCACTGGATGCC < 41bp 1 0.52651353361453 1 0.390377104282379 experiment 0.94697293277094 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636424 chr6:27636410 . . 0 7 hm5C_associated_SNPs_6285 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27636410 27636410 1 + C A rs113533199 27636425 + 27636405 27636445 41 AAGGTCGCGGGTTCGATCCCCGTACGGGCCACTGGATGCCA AAGGTAGCGGGTTCGATCCCCGTACGGGCCACTGGATGCCA < 41bp 1 0.202995700791915 1 0.256679534912109 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27636425 chr6:27636410 . . 0 6 hm5C_associated_SNPs_6286 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27636340-27636480
64251 chr6 27655967 27655967 1 + G A rs183382877 27655969 + 27655949 27655989 41 TAAGGCATCCTGTCATCCGGCCGGTTAGCTCAGTTGGTTAG TAAGGCATCCTGTCATCCAGCCGGTTAGCTCAGTTGGTTAG < 41bp 1 0.325395447332571 1 0.230339854955673 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27655969 chr6:27655967 . . 0 19 hm5C_associated_SNPs_6287 0 0 44 SSB POSTAR2 GSE95683,GSM2521599 chr6:27655954-27655994
64251 chr6 27655967 27655967 1 + G A rs183382877 27655970 + 27655950 27655990 41 AAGGCATCCTGTCATCCGGCCGGTTAGCTCAGTTGGTTAGA AAGGCATCCTGTCATCCAGCCGGTTAGCTCAGTTGGTTAGA < 41bp 1 0.115942197171117 1 0.0896208584308624 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27655970 chr6:27655967 . . 0 18 hm5C_associated_SNPs_6288 0 0 44 SSB POSTAR2 GSE95683,GSM2521599 chr6:27655954-27655994
64251 chr6 27655994 27655994 1 + T G rs1555021 27655999 + 27655979 27656019 41 CAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGG CAGTTGGTTAGAGCGGGGTGCTAATAACGCCAAGGTCGCGG < 41bp 1 0.197484810069807 1 0.0841743648052216 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27655999 chr6:27655994 . . 0 16 hm5C_associated_SNPs_6289 0 1 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27655954-27655994
64251 chr6 27655994 27655994 1 + T G rs1555021 27656009 + 27655989 27656029 41 GAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCC GAGCGGGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCC < 41bp 1 0.673086726274194 1 0.468200117349625 experiment 0.653826547451611 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27656009 chr6:27655994 . . 0 6 hm5C_associated_SNPs_6290 0 1 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:27655954-27655994
64251 chr6 27656020 27656020 1 + G A rs146043275 27656009 + 27655989 27656029 41 GAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCC GAGCGTGGTGCTAATAACGCCAAGGTCGCGGATTCGATCCC < 41bp 1 0.619540532826609 1 0.469555675983429 experiment 0.760918934346782 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF184;LINC01012 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27656009 chr6:27656020 . . 0 32 hm5C_associated_SNPs_6291 0 0 29 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:27656000-27656020
64251 chr6 27694478 27694478 1 + C G rs146833109 27694483 + 27694463 27694503 41 ACACAGGTGAGGCTTCGTGGCTTAGCTGGTTAAAGCGCCTG ACACAGGTGAGGCTTGGTGGCTTAGCTGGTTAAAGCGCCTG < 41bp 1 0.20454296314786 1 0.0869520902633667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694483 chr6:27694478 . . 0 16 hm5C_associated_SNPs_6292 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr6:27694460-27694480
64251 chr6 27694478 27694478 1 + C G rs146833109 27694498 + 27694478 27694518 41 CGTGGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAG GGTGGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAG < 41bp 1 0.613995755664146 1 0.307756930589676 experiment 0.772008488671708 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694498 chr6:27694478 . . 0 1 hm5C_associated_SNPs_6293 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr6:27694460-27694480
64251 chr6 27694498 27694498 1 + C A rs547002854 27694483 + 27694463 27694503 41 ACACAGGTGAGGCTTCGTGGCTTAGCTGGTTAAAGCGCCTG ACACAGGTGAGGCTTCGTGGCTTAGCTGGTTAAAGAGCCTG < 41bp 1 0.137189688501011 1 0.0681231915950775 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694483 chr6:27694498 . . 0 36 hm5C_associated_SNPs_6294 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27694466-27694505
64251 chr6 27694498 27694498 1 + C A rs547002854 27694500 + 27694480 27694520 41 TGGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAGAT TGGCTTAGCTGGTTAAAGAGCCTGTCTAGTAAACAGGAGAT < 41bp 1 0.120349459821042 1 0.11194035410881 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694500 chr6:27694498 . . 0 19 hm5C_associated_SNPs_6295 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27694466-27694505
64251 chr6 27694498 27694498 1 + C A rs547002854 27694501 + 27694481 27694521 41 GGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATC GGCTTAGCTGGTTAAAGAGCCTGTCTAGTAAACAGGAGATC < 41bp 1 0.0956966543168074 1 0.0818759500980377 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694501 chr6:27694498 . . 0 18 hm5C_associated_SNPs_6296 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27694466-27694505
64251 chr6 27694498 27694498 1 + C A rs547002854 27694505 + 27694485 27694525 41 TAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG TAGCTGGTTAAAGAGCCTGTCTAGTAAACAGGAGATCCTGG < 41bp 1 0.282934012885749 1 0.19476392865181 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01012;LOC100131289 ENSG00000216676;ENSG00000216915 intergenic Human other chr6:27694505 chr6:27694498 . . 0 14 hm5C_associated_SNPs_6297 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27694466-27694505
64251 chr6 27745685 27745685 1 + C A rs192640550 27745674 + 27745654 27745694 41 GTTTTCCGTTAGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC GTTTTCCGTTAGCAGAGTGGCGCAGCGGAAGAGTGCTGGGC < 41bp 1 0.445908750086599 1 0.270045399665833 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745674 chr6:27745685 . . 0 32 hm5C_associated_SNPs_6298 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745689 + 27745669 27745709 41 AGTGGCGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGT AGTGGCGCAGCGGAAGAGTGCTGGGCCCATAACCCAGAGGT < 41bp 1 0.777879292907426 1 0.629458367824554 experiment 0.444241414185147 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745689 chr6:27745685 . . 0 17 hm5C_associated_SNPs_6299 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745694 + 27745674 27745714 41 CGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATG CGCAGCGGAAGAGTGCTGGGCCCATAACCCAGAGGTCGATG < 41bp 1 0.0852339639013548 1 0.0106645524501801 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745694 chr6:27745685 . . 0 12 hm5C_associated_SNPs_6300 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745695 + 27745675 27745715 41 GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGG GCAGCGGAAGAGTGCTGGGCCCATAACCCAGAGGTCGATGG < 41bp 1 0.20606312853648 1 0.0224739909172058 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745695 chr6:27745685 . . 0 11 hm5C_associated_SNPs_6301 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745696 + 27745676 27745716 41 CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGA CAGCGGAAGAGTGCTGGGCCCATAACCCAGAGGTCGATGGA < 41bp 1 0.328618226026477 1 0.0543208420276642 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745696 chr6:27745685 . . 0 10 hm5C_associated_SNPs_6302 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745701 + 27745681 27745721 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA GAAGAGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA < 41bp 1 0.366380042409639 1 0.5678391456604 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745701 chr6:27745685 . . 0 5 hm5C_associated_SNPs_6303 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745702 + 27745682 27745722 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA AAGAGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA < 41bp 1 0.602155477288666 1 0.897356450557709 experiment 0.795689045422667 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745702 chr6:27745685 . . 0 4 hm5C_associated_SNPs_6304 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745685 27745685 1 + C A rs192640550 27745703 + 27745683 27745723 41 AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC AGAGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC < 41bp 1 0.736941948959373 1 0.83152186870575 experiment 0.526116102081254 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745703 chr6:27745685 . . 0 3 hm5C_associated_SNPs_6305 0 0 15 FBL POSTAR2 GSE43666,GSM1067865 chr6:27745660-27745696
64251 chr6 27745714 27745714 1 + G A rs6920477 27745694 + 27745674 27745714 41 CGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATG CGCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATA < 41bp 1 0.0957397112052388 1 0.0193001329898834 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745694 chr6:27745714 . . 0 41 hm5C_associated_SNPs_6306 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745695 + 27745675 27745715 41 GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGG GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAG < 41bp 1 0.221829235782073 1 0.0190424621105194 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745695 chr6:27745714 . . 0 40 hm5C_associated_SNPs_6307 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745696 + 27745676 27745716 41 CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGA CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGA < 41bp 1 0.317175378861493 1 0.0418786406517029 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745696 chr6:27745714 . . 0 39 hm5C_associated_SNPs_6308 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745701 + 27745681 27745721 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCTAA < 41bp 1 0.333389279832503 1 0.462656497955322 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745701 chr6:27745714 . . 0 34 hm5C_associated_SNPs_6309 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745702 + 27745682 27745722 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCTAAA < 41bp 1 0.622944080455666 1 0.868396520614624 experiment 0.754111839088668 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745702 chr6:27745714 . . 0 33 hm5C_associated_SNPs_6310 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745703 + 27745683 27745723 41 AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC AGCGTGCTGGGCCCATAACCCAGAGGTCGATAGATCTAAAC < 41bp 1 0.724028682679098 1 0.861519634723663 experiment 0.551942634641804 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745703 chr6:27745714 . . 0 32 hm5C_associated_SNPs_6311 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745710 + 27745690 27745730 41 TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATAGATCTAAACCATCCTC < 41bp 1 0.421543454894789 1 0.226655304431915 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745710 chr6:27745714 . . 0 25 hm5C_associated_SNPs_6312 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745718 + 27745698 27745738 41 TAACCCAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAG TAACCCAGAGGTCGATAGATCTAAACCATCCTCTGCTAAAG < 41bp 1 0.523914645824497 1 0.763222098350525 experiment 0.952170708351006 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745718 chr6:27745714 . . 0 17 hm5C_associated_SNPs_6313 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745723 + 27745703 27745743 41 CAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGG CAGAGGTCGATAGATCTAAACCATCCTCTGCTAAAGAAGGG < 41bp 1 0.025257175839414 1 0.137723922729492 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745723 chr6:27745714 . . 0 12 hm5C_associated_SNPs_6314 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745724 + 27745704 27745744 41 AGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGT AGAGGTCGATAGATCTAAACCATCCTCTGCTAAAGAAGGGT < 41bp 1 0.0671212921989341 1 0.271651059389114 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745724 chr6:27745714 . . 0 11 hm5C_associated_SNPs_6315 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745714 27745714 1 + G A rs6920477 27745728 + 27745708 27745748 41 GTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT GTCGATAGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT < 41bp 1 0.190147364730902 1 0.0655748248100281 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745728 chr6:27745714 . . 0 7 hm5C_associated_SNPs_6316 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745695 + 27745675 27745715 41 GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGG GCAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGA < 41bp 1 0.202290687215579 1 0.0240503549575806 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745695 chr6:27745715 . . 0 41 hm5C_associated_SNPs_6317 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745696 + 27745676 27745716 41 CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGA CAGCGGAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGAA < 41bp 1 0.364368871983618 1 0.0572506189346313 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745696 chr6:27745715 . . 0 40 hm5C_associated_SNPs_6318 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745701 + 27745681 27745721 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGAATCTAA < 41bp 1 0.326459993267794 1 0.460090070962906 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745701 chr6:27745715 . . 0 35 hm5C_associated_SNPs_6319 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745702 + 27745682 27745722 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGAATCTAAA < 41bp 1 0.591511586097252 1 0.866820573806763 experiment 0.816976827805495 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745702 chr6:27745715 . . 0 34 hm5C_associated_SNPs_6320 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745703 + 27745683 27745723 41 AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC AGCGTGCTGGGCCCATAACCCAGAGGTCGATGAATCTAAAC < 41bp 1 0.736553004680007 1 0.830186247825623 experiment 0.526893990639986 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745703 chr6:27745715 . . 0 33 hm5C_associated_SNPs_6321 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745710 + 27745690 27745730 41 TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATGAATCTAAACCATCCTC < 41bp 1 0.267976508914793 1 0.186168432235718 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745710 chr6:27745715 . . 0 26 hm5C_associated_SNPs_6322 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745718 + 27745698 27745738 41 TAACCCAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAG TAACCCAGAGGTCGATGAATCTAAACCATCCTCTGCTAAAG < 41bp 1 0.558668878304486 1 0.735141634941101 experiment 0.882662243391029 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745718 chr6:27745715 . . 0 18 hm5C_associated_SNPs_6323 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745723 + 27745703 27745743 41 CAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGG CAGAGGTCGATGAATCTAAACCATCCTCTGCTAAAGAAGGG < 41bp 1 0.0230959582190309 1 0.113495528697968 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745723 chr6:27745715 . . 0 13 hm5C_associated_SNPs_6324 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745724 + 27745704 27745744 41 AGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGT AGAGGTCGATGAATCTAAACCATCCTCTGCTAAAGAAGGGT < 41bp 1 0.0584021295214739 1 0.244576334953308 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745724 chr6:27745715 . . 0 12 hm5C_associated_SNPs_6325 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745715 27745715 1 + G A rs188010313 27745728 + 27745708 27745748 41 GTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT GTCGATGAATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT < 41bp 1 0.15129617588821 1 0.0592441260814667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745728 chr6:27745715 . . 0 8 hm5C_associated_SNPs_6326 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745701 + 27745681 27745721 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATGTAA < 41bp 1 0.344605428378846 1 0.448969185352325 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745701 chr6:27745718 . . 0 38 hm5C_associated_SNPs_6327 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745702 + 27745682 27745722 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATGTAAA < 41bp 1 0.615135781352712 1 0.875723361968994 experiment 0.769728437294576 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745702 chr6:27745718 . . 0 37 hm5C_associated_SNPs_6328 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745703 + 27745683 27745723 41 AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATGTAAAC < 41bp 1 0.707181664485586 1 0.758405923843384 experiment 0.585636671028827 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745703 chr6:27745718 . . 0 36 hm5C_associated_SNPs_6329 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745710 + 27745690 27745730 41 TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATGGATGTAAACCATCCTC < 41bp 1 0.351255814964501 1 0.321437329053879 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745710 chr6:27745718 . . 0 29 hm5C_associated_SNPs_6330 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745723 + 27745703 27745743 41 CAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGG CAGAGGTCGATGGATGTAAACCATCCTCTGCTAAAGAAGGG < 41bp 1 0.0382905288118352 1 0.179834097623825 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745723 chr6:27745718 . . 0 16 hm5C_associated_SNPs_6331 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745724 + 27745704 27745744 41 AGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGT AGAGGTCGATGGATGTAAACCATCCTCTGCTAAAGAAGGGT < 41bp 1 0.0719138303888424 1 0.381384968757629 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745724 chr6:27745718 . . 0 15 hm5C_associated_SNPs_6332 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745718 27745718 1 + C G rs537629280 27745728 + 27745708 27745748 41 GTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT GTCGATGGATGTAAACCATCCTCTGCTAAAGAAGGGTGCTT < 41bp 1 0.185386750497621 1 0.0418024659156799 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745728 chr6:27745718 . . 0 11 hm5C_associated_SNPs_6333 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745701 + 27745681 27745721 41 GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAA GAAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCAAA < 41bp 1 0.3119860519993 1 0.464213848114014 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745701 chr6:27745719 . . 0 39 hm5C_associated_SNPs_6334 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745702 + 27745682 27745722 41 AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAA AAGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCAAAA < 41bp 1 0.638224034451165 1 0.838119387626648 experiment 0.723551931097669 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745702 chr6:27745719 . . 0 38 hm5C_associated_SNPs_6335 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745703 + 27745683 27745723 41 AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCTAAAC AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCAAAAC < 41bp 1 0.740268342087067 1 0.748964607715607 experiment 0.519463315825866 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745703 chr6:27745719 . . 0 37 hm5C_associated_SNPs_6336 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745710 + 27745690 27745730 41 TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATGGATCAAAACCATCCTC < 41bp 1 0.359721296640355 1 0.427184402942657 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745710 chr6:27745719 . . 0 30 hm5C_associated_SNPs_6337 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745718 + 27745698 27745738 41 TAACCCAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAG TAACCCAGAGGTCGATGGATCAAAACCATCCTCTGCTAAAG < 41bp 1 0.511559568122707 1 0.665461301803589 experiment 0.976880863754587 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745718 chr6:27745719 . . 0 22 hm5C_associated_SNPs_6338 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745723 + 27745703 27745743 41 CAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGG CAGAGGTCGATGGATCAAAACCATCCTCTGCTAAAGAAGGG < 41bp 1 0.0305290855459603 1 0.10982820391655 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745723 chr6:27745719 . . 0 17 hm5C_associated_SNPs_6339 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745724 + 27745704 27745744 41 AGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGT AGAGGTCGATGGATCAAAACCATCCTCTGCTAAAGAAGGGT < 41bp 1 0.0724941929860395 1 0.288740217685699 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745724 chr6:27745719 . . 0 16 hm5C_associated_SNPs_6340 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745719 27745719 1 + T A rs9468225 27745728 + 27745708 27745748 41 GTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT GTCGATGGATCAAAACCATCCTCTGCTAAAGAAGGGTGCTT < 41bp 1 0.1718907424982 1 0.0980135500431061 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745728 chr6:27745719 . . 0 12 hm5C_associated_SNPs_6341 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745720
64251 chr6 27745727 27745727 1 + C T rs574335983 27745710 + 27745690 27745730 41 TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATCCTC TGGGCCCATAACCCAGAGGTCGATGGATCTAAACCATTCTC < 41bp 1 0.290902143520007 1 0.259082496166229 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745710 chr6:27745727 . . 0 38 hm5C_associated_SNPs_6342 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745736
64251 chr6 27745727 27745727 1 + C T rs574335983 27745718 + 27745698 27745738 41 TAACCCAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAG TAACCCAGAGGTCGATGGATCTAAACCATTCTCTGCTAAAG < 41bp 1 0.434248833654346 1 0.45482537150383 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745718 chr6:27745727 . . 0 30 hm5C_associated_SNPs_6343 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745736
64251 chr6 27745727 27745727 1 + C T rs574335983 27745723 + 27745703 27745743 41 CAGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGG CAGAGGTCGATGGATCTAAACCATTCTCTGCTAAAGAAGGG < 41bp 1 0.0439756611395617 1 0.0850816965103149 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|27356879;GSE66010;miCLIP;HEK293;Control LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745723 chr6:27745727 . . 0 25 hm5C_associated_SNPs_6344 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745736
64251 chr6 27745727 27745727 1 + C T rs574335983 27745724 + 27745704 27745744 41 AGAGGTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGT AGAGGTCGATGGATCTAAACCATTCTCTGCTAAAGAAGGGT < 41bp 1 0.0334580646816716 1 0.159375488758087 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745724 chr6:27745727 . . 0 24 hm5C_associated_SNPs_6345 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745736
64251 chr6 27745727 27745727 1 + C T rs574335983 27745728 + 27745708 27745748 41 GTCGATGGATCTAAACCATCCTCTGCTAAAGAAGGGTGCTT GTCGATGGATCTAAACCATTCTCTGCTAAAGAAGGGTGCTT < 41bp 1 0.204916903639821 1 0.0670203268527985 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC100131289;HIST1H2BL ENSG00000216915;ENSG00000218069 intergenic Human other chr6:27745728 chr6:27745727 . . 0 20 hm5C_associated_SNPs_6346 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27745660-27745736
64251 chr6 27833342 27833342 1 + C T rs11966705 27833336 + 27833316 27833356 41 GAGATCCTGGAGCTGGCGGGCAACGCCGCCCGCGACAACAA GAGATCCTGGAGCTGGCGGGCAACGCTGCCCGCGACAACAA < 41bp 1 0.699065382846198 1 0.451244831085205 experiment 0.601869234307604 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833336 chr6:27833342 synonymous SNV . 0 27 hm5C_associated_SNPs_6347 0 0 1 FXR2 POSTAR2 ENCODE chr6:27833244-27833343
64251 chr6 27833342 27833342 1 + C T rs11966705 27833344 + 27833324 27833364 41 GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCC GGAGCTGGCGGGCAACGCTGCCCGCGACAACAAGAAGACCC < 41bp 1 0.393279924068046 1 0.303021162748337 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833344 chr6:27833342 synonymous SNV . 0 19 hm5C_associated_SNPs_6348 0 0 1 FXR2 POSTAR2 ENCODE chr6:27833244-27833343
64251 chr6 27833342 27833342 1 + C T rs11966705 27833345 + 27833325 27833365 41 GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCG GAGCTGGCGGGCAACGCTGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.502767115239193 1 0.291322350502014 experiment 0.994465769521615 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833345 chr6:27833342 synonymous SNV . 0 18 hm5C_associated_SNPs_6349 0 0 1 FXR2 POSTAR2 ENCODE chr6:27833244-27833343
64251 chr6 27861263 27861263 1 + C T rs552783351 27861272 + 27861252 27861292 41 GGCTAAATCTGCTCCTGCCCCCAAAAAGGGCTCCAAGAAAG GGCTAAATCTGTTCCTGCCCCCAAAAAGGGCTCCAAGAAAG < 41bp 1 0.445438286490035 1 0.415820837020874 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIST1H2BO ENSG00000196331 CDS Human other chr6:27861272 chr6:27861263 nonsynonymous SNV 0.014 0 12 hm5C_associated_SNPs_6350 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:27861200-27861280
64251 chr6 28117381 28117381 1 + C T rs376655976 28117361 + 28117341 28117381 41 TCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGC TCAGCTCCAATCTGAGGCAACCCAACATAAATCTCCAGTGT < 41bp 1 0.312218617580824 1 0.0608233511447906 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28117361 chr6:28117381 nonsynonymous SNV 0.028 0 41 hm5C_associated_SNPs_6351 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr6:28117357-28117387
64251 chr6 28180818 28180818 1 + G C rs76094573 28180817 + 28180797 28180837 41 GTTGTTGATTCTTTGTGTGACGAGGTGGCCGAGTGGTTAAG GTTGTTGATTCTTTGTGTGACCAGGTGGCCGAGTGGTTAAG < 41bp 1 0.27075576695137 1 0.287992179393768 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180817 chr6:28180818 . . 0 22 hm5C_associated_SNPs_6352 0 0 33 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28180800-28180820
64251 chr6 28180818 28180818 1 + G C rs76094573 28180825 + 28180805 28180845 41 TTCTTTGTGTGACGAGGTGGCCGAGTGGTTAAGGCGATGGA TTCTTTGTGTGACCAGGTGGCCGAGTGGTTAAGGCGATGGA < 41bp 1 0.213280793204091 1 0.385778725147247 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180825 chr6:28180818 . . 0 14 hm5C_associated_SNPs_6353 0 0 33 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28180800-28180820
64251 chr6 28180818 28180818 1 + G C rs76094573 28180826 + 28180806 28180846 41 TCTTTGTGTGACGAGGTGGCCGAGTGGTTAAGGCGATGGAC TCTTTGTGTGACCAGGTGGCCGAGTGGTTAAGGCGATGGAC < 41bp 1 0.54541825122538 1 0.771895051002502 experiment 0.90916349754924 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180826 chr6:28180818 . . 0 13 hm5C_associated_SNPs_6354 0 0 33 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28180800-28180820
64251 chr6 28180870 28180870 1 + A C rs78966053 28180854 + 28180834 28180874 41 TAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACACGTG TAAGGCGATGGACTGCTAATCCATTGTGCTCTGCACCCGTG < 41bp 1 0.155161001417065 1 0.257922202348709 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180854 chr6:28180870 . . 0 37 hm5C_associated_SNPs_6355 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180855 + 28180835 28180875 41 AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACACGTGG AAGGCGATGGACTGCTAATCCATTGTGCTCTGCACCCGTGG < 41bp 1 0.341001211730468 1 0.168320864439011 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180855 chr6:28180870 . . 0 36 hm5C_associated_SNPs_6356 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180862 + 28180842 28180882 41 TGGACTGCTAATCCATTGTGCTCTGCACACGTGGGTTCGAA TGGACTGCTAATCCATTGTGCTCTGCACCCGTGGGTTCGAA < 41bp 1 0.169755194567874 1 0.122292041778564 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180862 chr6:28180870 . . 0 29 hm5C_associated_SNPs_6357 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180864 + 28180844 28180884 41 GACTGCTAATCCATTGTGCTCTGCACACGTGGGTTCGAATC GACTGCTAATCCATTGTGCTCTGCACCCGTGGGTTCGAATC < 41bp 1 0.643812153957643 1 0.218161076307297 experiment 0.712375692084714 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180864 chr6:28180870 . . 0 27 hm5C_associated_SNPs_6358 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180867 + 28180847 28180887 41 TGCTAATCCATTGTGCTCTGCACACGTGGGTTCGAATCCCA TGCTAATCCATTGTGCTCTGCACCCGTGGGTTCGAATCCCA < 41bp 1 0.221312066809947 1 0.0104866921901703 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180867 chr6:28180870 . . 0 24 hm5C_associated_SNPs_6359 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180871 + 28180851 28180891 41 AATCCATTGTGCTCTGCACACGTGGGTTCGAATCCCATCCT AATCCATTGTGCTCTGCACCCGTGGGTTCGAATCCCATCCT < 41bp 1 0.778154364551547 1 0.522046625614166 experiment 0.443691270896907 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180871 chr6:28180870 . . 0 20 hm5C_associated_SNPs_6360 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180879 + 28180859 28180899 41 GTGCTCTGCACACGTGGGTTCGAATCCCATCCTCGTCGGCT GTGCTCTGCACCCGTGGGTTCGAATCCCATCCTCGTCGGCT < 41bp 1 0.172099626829591 1 0.0824550688266754 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180879 chr6:28180870 . . 0 12 hm5C_associated_SNPs_6361 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180884 + 28180864 28180904 41 CTGCACACGTGGGTTCGAATCCCATCCTCGTCGGCTGCATA CTGCACCCGTGGGTTCGAATCCCATCCTCGTCGGCTGCATA < 41bp 1 0.0921556445437628 1 0.0978614389896393 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180884 chr6:28180870 . . 0 7 hm5C_associated_SNPs_6362 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180885 + 28180865 28180905 41 TGCACACGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAG TGCACCCGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAG < 41bp 1 0.0743185036378397 1 0.124717205762863 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180885 chr6:28180870 . . 0 6 hm5C_associated_SNPs_6363 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180886 + 28180866 28180906 41 GCACACGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGC GCACCCGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGC < 41bp 1 0.133921218485836 1 0.0938081443309784 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180886 chr6:28180870 . . 0 5 hm5C_associated_SNPs_6364 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180889 + 28180869 28180909 41 CACGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGCAAG CCCGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGCAAG < 41bp 1 0.0910230278033642 1 0.0701884925365448 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180889 chr6:28180870 . . 0 2 hm5C_associated_SNPs_6365 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28180870 28180870 1 + A C rs78966053 28180890 + 28180870 28180910 41 ACGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGCAAGC CCGTGGGTTCGAATCCCATCCTCGTCGGCTGCATAGCAAGC < 41bp 1 0.308884452580903 1 0.29774409532547 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF192P1;TOB2P1 ENSG00000218016;ENSG00000176933 intergenic Human other chr6:28180890 chr6:28180870 . . 0 1 hm5C_associated_SNPs_6366 0 0 91 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28180848-28180872
64251 chr6 28249572 28249572 1 + C G rs560746538 28249567 + 28249547 28249587 41 CCGGTATTCAGTGCCTGGCGCGGTGCTAGATGCTGGGTGTA CCGGTATTCAGTGCCTGGCGCGGTGGTAGATGCTGGGTGTA < 41bp 1 0.522611932912096 1 0.735227465629578 experiment 0.954776134175808 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PGBD1 ENSG00000137338 UTR5 Human protein_coding chr6:28249567 chr6:28249572 . . 0 26 hm5C_associated_SNPs_6368 0 0 2 DDX3X POSTAR2 ENCODE chr6:28249464-28249580
64251 chr6 28505460 28505460 1 + A C rs542039118 28505443 + 28505423 28505463 41 CAATGCCGAGGTTGTGAGTTCAAGCCTCACCTGGAGCAGTT CAATGCCGAGGTTGTGAGTTCAAGCCTCACCTGGAGCCGTT < 41bp 1 0.341956105637624 1 0.215550005435944 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target GPX5;ZBED9 ENSG00000224586;ENSG00000232040 intergenic Human other chr6:28505443 chr6:28505460 . . 0 38 hm5C_associated_SNPs_6370 0 0 15 SSB POSTAR2 GSE95683,GSM2521599 chr6:28505360-28505460
64251 chr6 28505460 28505460 1 + A C rs542039118 28505450 + 28505430 28505470 41 GAGGTTGTGAGTTCAAGCCTCACCTGGAGCAGTTTTACTAT GAGGTTGTGAGTTCAAGCCTCACCTGGAGCCGTTTTACTAT < 41bp 1 0.245799834594132 1 0.0684711337089539 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target GPX5;ZBED9 ENSG00000224586;ENSG00000232040 intergenic Human other chr6:28505450 chr6:28505460 . . 0 31 hm5C_associated_SNPs_6371 0 0 15 SSB POSTAR2 GSE95683,GSM2521599 chr6:28505360-28505460
64251 chr6 28557145 28557145 1 + C A rs116739834 28557161 + 28557141 28557181 41 TGTACCCTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT TGTAACCTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT < 41bp 1 0.265341668998206 1 0.223408550024033 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557161 chr6:28557145 . . 0 5 hm5C_associated_SNPs_6372 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28557140-28557160
64251 chr6 28557146 28557146 1 + C A rs369411645 28557161 + 28557141 28557181 41 TGTACCCTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT TGTACACTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT < 41bp 1 0.273112851197621 1 0.199669897556305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557161 chr6:28557146 . . 0 6 hm5C_associated_SNPs_6373 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28557140-28557160
64251 chr6 28557149 28557149 1 + T C rs114416898 28557161 + 28557141 28557181 41 TGTACCCTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT TGTACCCTCGTGGTTGGTCCCATGGTGTAATGGTTAGCACT < 41bp 1 0.263863420987537 1 0.131687790155411 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557161 chr6:28557149 . . 0 9 hm5C_associated_SNPs_6374 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28557140-28557160
64251 chr6 28557151 28557151 1 + T C rs397708 28557161 + 28557141 28557181 41 TGTACCCTTGTGGTTGGTCCCATGGTGTAATGGTTAGCACT TGTACCCTTGCGGTTGGTCCCATGGTGTAATGGTTAGCACT < 41bp 1 0.276720232796322 1 0.139787226915359 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9 ENSG00000246350 ncRNA_exonic Human antisense chr6:28557161 chr6:28557151 . . 0 11 hm5C_associated_SNPs_6375 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28557140-28557160
64251 chr6 28574978 28574978 1 + T C rs536026969 28574958 + 28574938 28574978 41 TGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGTACGAGGT TGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGTACGAGGC < 41bp 1 0.4844905390424 1 0.455250293016434 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574958 chr6:28574978 . . 0 41 hm5C_associated_SNPs_6376 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574962 + 28574942 28574982 41 GCTCAGTGGTAGAGCGCGTGCTTAGCATGTACGAGGTCCCG GCTCAGTGGTAGAGCGCGTGCTTAGCATGTACGAGGCCCCG < 41bp 1 0.389807740937996 1 0.0518938601016998 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574962 chr6:28574978 . . 0 37 hm5C_associated_SNPs_6377 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574967 + 28574947 28574987 41 GTGGTAGAGCGCGTGCTTAGCATGTACGAGGTCCCGGGTTC GTGGTAGAGCGCGTGCTTAGCATGTACGAGGCCCCGGGTTC < 41bp 1 0.592704261350662 1 0.309579193592072 experiment 0.814591477298676 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574967 chr6:28574978 . . 0 32 hm5C_associated_SNPs_6378 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574973 + 28574953 28574993 41 GAGCGCGTGCTTAGCATGTACGAGGTCCCGGGTTCAATCCC GAGCGCGTGCTTAGCATGTACGAGGCCCCGGGTTCAATCCC < 41bp 1 0.767841336685212 1 0.225186705589294 experiment 0.464317326629575 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574973 chr6:28574978 . . 0 26 hm5C_associated_SNPs_6379 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574979 + 28574959 28574999 41 GTGCTTAGCATGTACGAGGTCCCGGGTTCAATCCCCGGCAC GTGCTTAGCATGTACGAGGCCCCGGGTTCAATCCCCGGCAC < 41bp 1 0.763864247004251 1 0.343400657176971 experiment 0.472271505991498 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574979 chr6:28574978 . . 0 20 hm5C_associated_SNPs_6380 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574980 + 28574960 28575000 41 TGCTTAGCATGTACGAGGTCCCGGGTTCAATCCCCGGCACC TGCTTAGCATGTACGAGGCCCCGGGTTCAATCCCCGGCACC < 41bp 1 0.556984066433888 1 0.391357183456421 experiment 0.886031867132224 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574980 chr6:28574978 . . 0 19 hm5C_associated_SNPs_6381 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574987 + 28574967 28575007 41 CATGTACGAGGTCCCGGGTTCAATCCCCGGCACCTCCACCA CATGTACGAGGCCCCGGGTTCAATCCCCGGCACCTCCACCA < 41bp 1 0.222776341382322 1 0.111714512109756 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574987 chr6:28574978 . . 0 12 hm5C_associated_SNPs_6382 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574991 + 28574971 28575011 41 TACGAGGTCCCGGGTTCAATCCCCGGCACCTCCACCAGTTT TACGAGGCCCCGGGTTCAATCCCCGGCACCTCCACCAGTTT < 41bp 1 0.460262959922962 1 0.221023976802826 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574991 chr6:28574978 . . 0 8 hm5C_associated_SNPs_6383 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574992 + 28574972 28575012 41 ACGAGGTCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTT ACGAGGCCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTT < 41bp 1 0.554361637753918 1 0.758486092090607 experiment 0.891276724492165 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574992 chr6:28574978 . . 0 7 hm5C_associated_SNPs_6384 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574993 + 28574973 28575013 41 CGAGGTCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTG CGAGGCCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTG < 41bp 1 0.342937235451533 1 0.379184424877167 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574993 chr6:28574978 . . 0 6 hm5C_associated_SNPs_6385 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574994 + 28574974 28575014 41 GAGGTCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTGG GAGGCCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTGG < 41bp 1 0.667003963400555 1 0.694162011146545 experiment 0.665992073198889 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574994 chr6:28574978 . . 0 5 hm5C_associated_SNPs_6386 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28574978 28574978 1 + T C rs536026969 28574997 + 28574977 28575017 41 GTCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTGGGAG GCCCCGGGTTCAATCCCCGGCACCTCCACCAGTTTTGGGAG < 41bp 1 0.26594157909551 1 0.197911620140076 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9 ENSG00000246350;ENSG00000271440 intergenic Human other chr6:28574997 chr6:28574978 . . 0 2 hm5C_associated_SNPs_6387 0 0 105 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28574960-28574980
64251 chr6 28611252 28611252 1 + T A rs543537348 28611232 + 28611212 28611252 41 GTCTATGTGTGGGGATGTAGCTCAGTGGTAGAGCGCATGCT GTCTATGTGTGGGGATGTAGCTCAGTGGTAGAGCGCATGCA < 41bp 1 0.528321191762759 1 0.0785869657993317 experiment 0.943357616474483 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611232 chr6:28611252 . . 0 41 hm5C_associated_SNPs_6388 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28611215-28611252
64251 chr6 28611252 28611252 1 + T A rs543537348 28611245 + 28611225 28611265 41 GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAG GATGTAGCTCAGTGGTAGAGCGCATGCATTGCATGTATGAG < 41bp 1 0.268200826185076 1 0.0768329799175262 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611245 chr6:28611252 . . 0 28 hm5C_associated_SNPs_6389 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28611215-28611252
64251 chr6 28611252 28611252 1 + T A rs543537348 28611268 + 28611248 28611288 41 ATGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCAT ATGCATTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCAT < 41bp 1 0.650306461936298 1 0.806942105293274 experiment 0.699387076127404 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611268 chr6:28611252 . . 0 5 hm5C_associated_SNPs_6390 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28611215-28611252
64251 chr6 28611252 28611252 1 + T A rs543537348 28611269 + 28611249 28611289 41 TGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATC TGCATTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATC < 41bp 1 0.405250711185506 1 0.419480264186859 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611269 chr6:28611252 . . 0 4 hm5C_associated_SNPs_6391 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28611215-28611252
64251 chr6 28611261 28611261 1 + A G rs142968153 28611245 + 28611225 28611265 41 GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTATGAG GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCATGTGTGAG < 41bp 1 0.272821930241351 1 0.0987185537815094 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611245 chr6:28611261 . . 0 37 hm5C_associated_SNPs_6392 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611240-28611280
64251 chr6 28611261 28611261 1 + A G rs142968153 28611268 + 28611248 28611288 41 ATGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCAT ATGCTTTGCATGTGTGAGGTCCCGGGTTCGATCCCCGGCAT < 41bp 1 0.67658709726532 1 0.887403666973114 experiment 0.646825805469361 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611268 chr6:28611261 . . 0 14 hm5C_associated_SNPs_6393 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611240-28611280
64251 chr6 28611261 28611261 1 + A G rs142968153 28611269 + 28611249 28611289 41 TGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATC TGCTTTGCATGTGTGAGGTCCCGGGTTCGATCCCCGGCATC < 41bp 1 0.50194134067239 1 0.665505945682526 experiment 0.996117318655219 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611269 chr6:28611261 . . 0 13 hm5C_associated_SNPs_6394 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611240-28611280
64251 chr6 28611269 28611269 1 + C A rs559361842 28611282 + 28611262 28611302 41 TGAGGTCCCGGGTTCGATCCCCGGCATCTCCAATAGGTATT TGAGGTCACGGGTTCGATCCCCGGCATCTCCAATAGGTATT < 41bp 1 0.259272210930836 1 0.172166168689728 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611282 chr6:28611269 . . 0 8 hm5C_associated_SNPs_6395 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611240-28611280
64251 chr6 28611289 28611289 1 + C T rs115580222 28611269 + 28611249 28611289 41 TGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATC TGCTTTGCATGTATGAGGTCCCGGGTTCGATCCCCGGCATT < 41bp 1 0.371560038067839 1 0.428669989109039 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611269 chr6:28611289 . . 0 41 hm5C_associated_SNPs_6396 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611252-28611309
64251 chr6 28611289 28611289 1 + C T rs115580222 28611282 + 28611262 28611302 41 TGAGGTCCCGGGTTCGATCCCCGGCATCTCCAATAGGTATT TGAGGTCCCGGGTTCGATCCCCGGCATTTCCAATAGGTATT < 41bp 1 0.218162717229689 1 0.248357206583023 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZBED9;LINC00533 ENSG00000271440;ENSG00000272278 intergenic Human other chr6:28611282 chr6:28611289 . . 0 28 hm5C_associated_SNPs_6397 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28611252-28611309
64251 chr6 28678368 28678368 1 + G A rs151253159 28678376 + 28678356 28678396 41 CTAGCTTTAAGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT CTAGCTTTAAGGAGGTGTAGCTCAGTGGTAGAGCGCGTGCT < 41bp 1 0.345817735809328 1 0.0876290500164032 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678376 chr6:28678368 . . 0 13 hm5C_associated_SNPs_6398 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28678360-28678380
64251 chr6 28678368 28678368 1 + G A rs151253159 28678378 + 28678358 28678398 41 AGCTTTAAGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTA AGCTTTAAGGAGGTGTAGCTCAGTGGTAGAGCGCGTGCTTA < 41bp 1 0.684252478813726 1 0.805902004241943 experiment 0.631495042372549 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678378 chr6:28678368 . . 0 11 hm5C_associated_SNPs_6399 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28678360-28678380
64251 chr6 28678387 28678387 1 + A G rs77679360 28678376 + 28678356 28678396 41 CTAGCTTTAAGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT CTAGCTTTAAGGGGGTGTAGCTCAGTGGTAGGGCGCGTGCT < 41bp 1 0.441439049106689 1 0.283150166273117 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678376 chr6:28678387 . . 0 32 hm5C_associated_SNPs_6400 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678378 + 28678358 28678398 41 AGCTTTAAGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCTTA AGCTTTAAGGGGGTGTAGCTCAGTGGTAGGGCGCGTGCTTA < 41bp 1 0.719997229052278 1 0.845963597297668 experiment 0.560005541895444 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678378 chr6:28678387 . . 0 30 hm5C_associated_SNPs_6401 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678389 + 28678369 28678409 41 GGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAG GGTGTAGCTCAGTGGTAGGGCGCGTGCTTAGCATGCACGAG < 41bp 1 0.606514579897633 1 0.440521001815796 experiment 0.786970840204735 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678389 chr6:28678387 . . 0 19 hm5C_associated_SNPs_6402 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678391 + 28678371 28678411 41 TGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGC TGTAGCTCAGTGGTAGGGCGCGTGCTTAGCATGCACGAGGC < 41bp 1 0.380795834095162 1 0.197815358638763 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678391 chr6:28678387 . . 0 17 hm5C_associated_SNPs_6403 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678395 + 28678375 28678415 41 GCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGCCCTG GCTCAGTGGTAGGGCGCGTGCTTAGCATGCACGAGGCCCTG < 41bp 1 0.447494500661173 1 0.0719825029373169 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678395 chr6:28678387 . . 0 13 hm5C_associated_SNPs_6404 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678400 + 28678380 28678420 41 GTGGTAGAGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTC GTGGTAGGGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTC < 41bp 1 0.453340678423159 1 0.507016539573669 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678400 chr6:28678387 . . 0 8 hm5C_associated_SNPs_6405 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678387 28678387 1 + A G rs77679360 28678406 + 28678386 28678426 41 GAGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTCAATCCC GGGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTCAATCCC < 41bp 1 0.742336223901173 1 0.553831160068512 experiment 0.515327552197653 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678406 chr6:28678387 . . 0 2 hm5C_associated_SNPs_6406 0 0 21 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:28678360-28678420
64251 chr6 28678406 28678406 1 + C G rs369829956 28678389 + 28678369 28678409 41 GGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAG GGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCAGGAG < 41bp 1 0.655576992553739 1 0.524867117404938 experiment 0.688846014892523 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678389 chr6:28678406 . . 0 38 hm5C_associated_SNPs_6407 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678391 + 28678371 28678411 41 TGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGC TGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCAGGAGGC < 41bp 1 0.397355746366448 1 0.436490446329117 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678391 chr6:28678406 . . 0 36 hm5C_associated_SNPs_6408 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678395 + 28678375 28678415 41 GCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGCCCTG GCTCAGTGGTAGAGCGCGTGCTTAGCATGCAGGAGGCCCTG < 41bp 1 0.373205748408062 1 0.0470384359359741 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678395 chr6:28678406 . . 0 32 hm5C_associated_SNPs_6409 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678400 + 28678380 28678420 41 GTGGTAGAGCGCGTGCTTAGCATGCACGAGGCCCTGGGTTC GTGGTAGAGCGCGTGCTTAGCATGCAGGAGGCCCTGGGTTC < 41bp 1 0.43954373991696 1 0.451599061489105 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678400 chr6:28678406 . . 0 27 hm5C_associated_SNPs_6410 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678411 + 28678391 28678431 41 CGTGCTTAGCATGCACGAGGCCCTGGGTTCAATCCCCAGCA CGTGCTTAGCATGCAGGAGGCCCTGGGTTCAATCCCCAGCA < 41bp 1 0.249743319265507 1 0.168956398963928 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678411 chr6:28678406 . . 0 16 hm5C_associated_SNPs_6411 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678412 + 28678392 28678432 41 GTGCTTAGCATGCACGAGGCCCTGGGTTCAATCCCCAGCAC GTGCTTAGCATGCAGGAGGCCCTGGGTTCAATCCCCAGCAC < 41bp 1 0.462897688402978 1 0.221095263957977 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678412 chr6:28678406 . . 0 15 hm5C_associated_SNPs_6412 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678413 + 28678393 28678433 41 TGCTTAGCATGCACGAGGCCCTGGGTTCAATCCCCAGCACC TGCTTAGCATGCAGGAGGCCCTGGGTTCAATCCCCAGCACC < 41bp 1 0.771275254086058 1 0.470381677150726 experiment 0.457449491827883 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678413 chr6:28678406 . . 0 14 hm5C_associated_SNPs_6413 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678420 + 28678400 28678440 41 CATGCACGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGT CATGCAGGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGT < 41bp 1 0.17856883554826 1 0.0315842628479004 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678420 chr6:28678406 . . 0 7 hm5C_associated_SNPs_6414 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678424 + 28678404 28678444 41 CACGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTA CAGGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTA < 41bp 1 0.555080600742497 1 0.229709148406982 experiment 0.889838798515006 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678424 chr6:28678406 . . 0 3 hm5C_associated_SNPs_6415 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678425 + 28678405 28678445 41 ACGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTAT AGGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTAT < 41bp 1 0.234286916981475 1 0.44929364323616 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678425 chr6:28678406 . . 0 2 hm5C_associated_SNPs_6416 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28678406 28678406 1 + C G rs369829956 28678426 + 28678406 28678446 41 CGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTATG GGAGGCCCTGGGTTCAATCCCCAGCACCTCCATGTATTATG < 41bp 1 0.204084268596535 1 0.453490555286407 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28678426 chr6:28678406 . . 0 1 hm5C_associated_SNPs_6417 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28678403-28678429
64251 chr6 28687481 28687481 1 + G A rs148476028 28687491 + 28687471 28687511 41 CTATTGCAACGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT CTATTGCAACAGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT < 41bp 1 0.450888399881132 1 0.263635128736496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687491 chr6:28687481 . . 0 11 hm5C_associated_SNPs_6418 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:28687472-28687498
64251 chr6 28687489 28687489 1 + A G rs116575156 28687491 + 28687471 28687511 41 CTATTGCAACGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT CTATTGCAACGGGGGTGTGGCTCAGTGGTAGAGCGCGTGCT < 41bp 1 0.403272999461616 1 0.477913022041321 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687491 chr6:28687489 . . 0 19 hm5C_associated_SNPs_6419 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:28687472-28687498
64251 chr6 28687489 28687489 1 + A G rs116575156 28687504 + 28687484 28687524 41 GGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAG GGTGTGGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAG < 41bp 1 0.700769112481875 1 0.524006962776184 experiment 0.598461775036249 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687504 chr6:28687489 . . 0 6 hm5C_associated_SNPs_6420 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:28687472-28687498
64251 chr6 28687499 28687499 1 + T A rs111467285 28687491 + 28687471 28687511 41 CTATTGCAACGGGGGTGTAGCTCAGTGGTAGAGCGCGTGCT CTATTGCAACGGGGGTGTAGCTCAGTGGAAGAGCGCGTGCT < 41bp 1 0.475960523603024 1 0.412257015705109 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687491 chr6:28687499 . . 0 29 hm5C_associated_SNPs_6421 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:28687475-28687499
64251 chr6 28687499 28687499 1 + T A rs111467285 28687504 + 28687484 28687524 41 GGTGTAGCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAG GGTGTAGCTCAGTGGAAGAGCGCGTGCTTAGCATGCACGAG < 41bp 1 0.686681781171121 1 0.520466923713684 experiment 0.626636437657758 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687504 chr6:28687499 . . 0 16 hm5C_associated_SNPs_6422 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:28687475-28687499
64251 chr6 28687499 28687499 1 + T A rs111467285 28687510 + 28687490 28687530 41 GCTCAGTGGTAGAGCGCGTGCTTAGCATGCACGAGGCCCCG GCTCAGTGGAAGAGCGCGTGCTTAGCATGCACGAGGCCCCG < 41bp 1 0.374240780866482 1 0.0272349119186401 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687510 chr6:28687499 . . 0 10 hm5C_associated_SNPs_6423 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:28687475-28687499
64251 chr6 28687543 28687543 1 + G A rs530143390 28687528 + 28687508 28687548 41 TGCTTAGCATGCACGAGGCCCCGGGTTCAATCCCTGGCACC TGCTTAGCATGCACGAGGCCCCGGGTTCAATCCCTAGCACC < 41bp 1 0.516283105910304 1 0.333420783281326 experiment 0.967433788179392 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28687528 chr6:28687543 . . 0 36 hm5C_associated_SNPs_6424 0 0 10 SSB POSTAR2 GSE95683,GSM2521600 chr6:28687520-28687560
64251 chr6 28693800 28693800 1 + C T rs145472571 28693805 + 28693785 28693825 41 AGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGCGCCTG AGTCTCCGTGGGCTCTGTAGCTTAGTTGGTTAAAGCGCCTG < 41bp 1 0.357001664391214 1 0.25536835193634 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693805 chr6:28693800 . . 0 16 hm5C_associated_SNPs_6425 0 0 39 SSB POSTAR2 GSE95683,GSM2521599 chr6:28693780-28693800
64251 chr6 28693800 28693800 1 + C T rs145472571 28693820 + 28693800 28693840 41 CGTAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG TGTAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG < 41bp 1 0.56194860636548 1 0.201084911823273 experiment 0.87610278726904 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693820 chr6:28693800 . . 0 1 hm5C_associated_SNPs_6426 0 0 39 SSB POSTAR2 GSE95683,GSM2521599 chr6:28693780-28693800
64251 chr6 28693802 28693802 1 + T C rs116446793 28693800 + 28693780 28693820 41 AAAACAGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGC AAAACAGTCTCCGTGGGCTCCGCAGCTTAGTTGGTTAAAGC < 41bp 1 0.276477488662015 1 0.162943929433823 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693800 chr6:28693802 . . 0 23 hm5C_associated_SNPs_6427 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693802 28693802 1 + T C rs116446793 28693805 + 28693785 28693825 41 AGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGCGCCTG AGTCTCCGTGGGCTCCGCAGCTTAGTTGGTTAAAGCGCCTG < 41bp 1 0.260411924399784 1 0.337512731552124 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693805 chr6:28693802 . . 0 18 hm5C_associated_SNPs_6428 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693802 28693802 1 + T C rs116446793 28693820 + 28693800 28693840 41 CGTAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG CGCAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG < 41bp 1 0.505189406340499 1 0.193990021944046 experiment 0.989621187319002 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693820 chr6:28693802 . . 0 3 hm5C_associated_SNPs_6429 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693809 28693809 1 + G A rs148841510 28693800 + 28693780 28693820 41 AAAACAGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGC AAAACAGTCTCCGTGGGCTCCGTAGCTTAATTGGTTAAAGC < 41bp 1 0.111492891672349 1 0.0457979738712311 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693800 chr6:28693809 . . 0 30 hm5C_associated_SNPs_6430 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693809 28693809 1 + G A rs148841510 28693805 + 28693785 28693825 41 AGTCTCCGTGGGCTCCGTAGCTTAGTTGGTTAAAGCGCCTG AGTCTCCGTGGGCTCCGTAGCTTAATTGGTTAAAGCGCCTG < 41bp 1 0.41667881469644 1 0.660941183567047 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693805 chr6:28693809 . . 0 25 hm5C_associated_SNPs_6431 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693809 28693809 1 + G A rs148841510 28693820 + 28693800 28693840 41 CGTAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG CGTAGCTTAATTGGTTAAAGCGCCTGTCTAGTAAACAGGAG < 41bp 1 0.510999365415375 1 0.191096395254135 experiment 0.978001269169251 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693820 chr6:28693809 . . 0 10 hm5C_associated_SNPs_6432 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693809 28693809 1 + G A rs148841510 28693827 + 28693807 28693847 41 TAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG TAATTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG < 41bp 1 0.341867933318365 1 0.353074491024017 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693827 chr6:28693809 . . 0 3 hm5C_associated_SNPs_6433 0 0 19 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693827 28693827 1 + C A rs572623484 28693820 + 28693800 28693840 41 CGTAGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAG CGTAGCTTAGTTGGTTAAAGCGCCTGTATAGTAAACAGGAG < 41bp 1 0.562294930140047 1 0.282552003860474 experiment 0.875410139719907 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693820 chr6:28693827 . . 0 28 hm5C_associated_SNPs_6434 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693827 28693827 1 + C A rs572623484 28693843 + 28693823 28693863 41 CTGTCTAGTAAACAGGAGATCCTGGGTTCGACTCCCAGCGG CTGTATAGTAAACAGGAGATCCTGGGTTCGACTCCCAGCGG < 41bp 1 0.52544875407627 1 0.42626565694809 experiment 0.949102491847461 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693843 chr6:28693827 . . 0 5 hm5C_associated_SNPs_6435 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693827 + 28693807 28693847 41 TAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGG TAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCTTGG < 41bp 1 0.306550032385184 1 0.18179515004158 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693827 chr6:28693844 . . 0 38 hm5C_associated_SNPs_6436 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693843 + 28693823 28693863 41 CTGTCTAGTAAACAGGAGATCCTGGGTTCGACTCCCAGCGG CTGTCTAGTAAACAGGAGATCTTGGGTTCGACTCCCAGCGG < 41bp 1 0.715022755395252 1 0.230989813804626 experiment 0.569954489209497 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693843 chr6:28693844 . . 0 22 hm5C_associated_SNPs_6437 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693851 + 28693831 28693871 41 TAAACAGGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGG TAAACAGGAGATCTTGGGTTCGACTCCCAGCGGGGCCTTGG < 41bp 1 0.269667890161576 1 0.0888975262641907 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693851 chr6:28693844 . . 0 14 hm5C_associated_SNPs_6438 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693856 + 28693836 28693876 41 AGGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGC AGGAGATCTTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGC < 41bp 1 0.267674851394721 1 0.383025825023651 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693856 chr6:28693844 . . 0 9 hm5C_associated_SNPs_6439 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693857 + 28693837 28693877 41 GGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCA GGAGATCTTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCA < 41bp 1 0.257929436039423 1 0.439641952514648 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693857 chr6:28693844 . . 0 8 hm5C_associated_SNPs_6440 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693858 + 28693838 28693878 41 GAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAA GAGATCTTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAA < 41bp 1 0.7034354504868 1 0.760060131549835 experiment 0.593129099026399 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693858 chr6:28693844 . . 0 7 hm5C_associated_SNPs_6441 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693844 28693844 1 + C T rs188401418 28693861 + 28693841 28693881 41 ATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAAGGT ATCTTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAAGGT < 41bp 1 0.716904217203457 1 0.937469244003296 experiment 0.566191565593085 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693861 chr6:28693844 . . 0 4 hm5C_associated_SNPs_6442 0 0 48 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693843 + 28693823 28693863 41 CTGTCTAGTAAACAGGAGATCCTGGGTTCGACTCCCAGCGG CTGTCTAGTAAACAGGAGATCCTGGGTTCAACTCCCAGCGG < 41bp 1 0.491391716103248 1 0.321435272693634 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693843 chr6:28693852 . . 0 30 hm5C_associated_SNPs_6443 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693851 + 28693831 28693871 41 TAAACAGGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGG TAAACAGGAGATCCTGGGTTCAACTCCCAGCGGGGCCTTGG < 41bp 1 0.231395493214179 1 0.0480727255344391 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693851 chr6:28693852 . . 0 22 hm5C_associated_SNPs_6444 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693856 + 28693836 28693876 41 AGGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGC AGGAGATCCTGGGTTCAACTCCCAGCGGGGCCTTGGTTGGC < 41bp 1 0.309629661586839 1 0.678675413131714 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693856 chr6:28693852 . . 0 17 hm5C_associated_SNPs_6445 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693857 + 28693837 28693877 41 GGAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCA GGAGATCCTGGGTTCAACTCCCAGCGGGGCCTTGGTTGGCA < 41bp 1 0.22857115711247 1 0.505480289459229 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693857 chr6:28693852 . . 0 16 hm5C_associated_SNPs_6446 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693858 + 28693838 28693878 41 GAGATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAA GAGATCCTGGGTTCAACTCCCAGCGGGGCCTTGGTTGGCAA < 41bp 1 0.72790514930945 1 0.79801994562149 experiment 0.544189701381099 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693858 chr6:28693852 . . 0 15 hm5C_associated_SNPs_6447 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28693852 28693852 1 + G A rs7746022 28693861 + 28693841 28693881 41 ATCCTGGGTTCGACTCCCAGCGGGGCCTTGGTTGGCAAGGT ATCCTGGGTTCAACTCCCAGCGGGGCCTTGGTTGGCAAGGT < 41bp 1 0.668762576718405 1 0.910639405250549 experiment 0.66247484656319 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28693861 chr6:28693852 . . 0 12 hm5C_associated_SNPs_6448 0 0 50 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28693780-28693880
64251 chr6 28697151 28697151 1 + C A rs190094265 28697137 + 28697117 28697157 41 CGTGCTTCGCATGTACGAGGCCCCGGGTTCGACCCCCGGCT CGTGCTTCGCATGTACGAGGCCCCGGGTTCGACCACCGGCT < 41bp 1 0.304406129602301 1 0.121918559074402 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28697137 chr6:28697151 . . 0 35 hm5C_associated_SNPs_6449 0 0 36 SSB POSTAR2 GSE95683,GSM2521599 chr6:28697080-28697160
64251 chr6 28697151 28697151 1 + C A rs190094265 28697138 + 28697118 28697158 41 GTGCTTCGCATGTACGAGGCCCCGGGTTCGACCCCCGGCTC GTGCTTCGCATGTACGAGGCCCCGGGTTCGACCACCGGCTC < 41bp 1 0.665313574571971 1 0.506311416625977 experiment 0.669372850856057 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28697138 chr6:28697151 . . 0 34 hm5C_associated_SNPs_6450 0 0 36 SSB POSTAR2 GSE95683,GSM2521599 chr6:28697080-28697160
64251 chr6 28697151 28697151 1 + C A rs190094265 28697139 + 28697119 28697159 41 TGCTTCGCATGTACGAGGCCCCGGGTTCGACCCCCGGCTCC TGCTTCGCATGTACGAGGCCCCGGGTTCGACCACCGGCTCC < 41bp 1 0.657239585600237 1 0.322072178125381 experiment 0.685520828799525 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28697139 chr6:28697151 . . 0 33 hm5C_associated_SNPs_6451 0 0 36 SSB POSTAR2 GSE95683,GSM2521599 chr6:28697080-28697160
64251 chr6 28697151 28697151 1 + C A rs190094265 28697146 + 28697126 28697166 41 CATGTACGAGGCCCCGGGTTCGACCCCCGGCTCCTCCAGTT CATGTACGAGGCCCCGGGTTCGACCACCGGCTCCTCCAGTT < 41bp 1 0.428506684827217 1 0.138717710971832 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28697146 chr6:28697151 . . 0 26 hm5C_associated_SNPs_6452 0 0 36 SSB POSTAR2 GSE95683,GSM2521599 chr6:28697080-28697160
64251 chr6 28697151 28697151 1 + C A rs190094265 28697156 + 28697136 28697176 41 GCCCCGGGTTCGACCCCCGGCTCCTCCAGTTGTCCATTTTC GCCCCGGGTTCGACCACCGGCTCCTCCAGTTGTCCATTTTC < 41bp 1 0.183566436663537 1 0.229268908500671 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000235570;ENSG00000237425 intergenic Human other chr6:28697156 chr6:28697151 . . 0 16 hm5C_associated_SNPs_6453 0 0 36 SSB POSTAR2 GSE95683,GSM2521599 chr6:28697080-28697160
64251 chr6 28715521 28715521 1 + G A rs142646949 28715522 + 28715502 28715542 41 TGGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAG TGGGTTGCGTCTACCCAGGACCTGGATAGCTCAGTTGGTAG < 41bp 1 0.211998151678953 1 0.119551181793213 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715522 chr6:28715521 . . 0 20 hm5C_associated_SNPs_6454 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715521 28715521 1 + G A rs142646949 28715523 + 28715503 28715543 41 GGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAGA GGGTTGCGTCTACCCAGGACCTGGATAGCTCAGTTGGTAGA < 41bp 1 0.690203593574651 1 0.719874739646912 experiment 0.619592812850697 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715523 chr6:28715521 . . 0 19 hm5C_associated_SNPs_6455 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715521 28715521 1 + G A rs142646949 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGACCTGGATAGCTCAGTTGGTAGAACATCAGA < 41bp 1 0.621133660870072 1 0.266806393861771 experiment 0.757732678259856 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715521 . . 0 11 hm5C_associated_SNPs_6456 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715521 28715521 1 + G A rs142646949 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGACCTGGATAGCTCAGTTGGTAGAACATCAGACT < 41bp 1 0.358157675802988 1 0.26610067486763 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715521 . . 0 9 hm5C_associated_SNPs_6457 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715523 28715523 1 + C G rs369041602 28715522 + 28715502 28715542 41 TGGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAG TGGGTTGCGTCTACCCAGGGCGTGGATAGCTCAGTTGGTAG < 41bp 1 0.423949516934092 1 0.208103686571121 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715522 chr6:28715523 . . 0 22 hm5C_associated_SNPs_6458 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715523 28715523 1 + C G rs369041602 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGGCGTGGATAGCTCAGTTGGTAGAACATCAGA < 41bp 1 0.663228376299088 1 0.450037777423859 experiment 0.673543247401824 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715523 . . 0 13 hm5C_associated_SNPs_6459 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715523 28715523 1 + C G rs369041602 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGGCGTGGATAGCTCAGTTGGTAGAACATCAGACT < 41bp 1 0.417688098729257 1 0.350343704223633 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715523 . . 0 11 hm5C_associated_SNPs_6460 0 0 56 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715522 + 28715502 28715542 41 TGGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAG TGGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTAGGTAG < 41bp 1 0.215710062732925 1 0.159472703933716 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715522 chr6:28715537 . . 0 36 hm5C_associated_SNPs_6461 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715523 + 28715503 28715543 41 GGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTTGGTAGA GGGTTGCGTCTACCCAGGGCCTGGATAGCTCAGTAGGTAGA < 41bp 1 0.60515669533328 1 0.51784747838974 experiment 0.789686609333439 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715523 chr6:28715537 . . 0 35 hm5C_associated_SNPs_6462 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGGCCTGGATAGCTCAGTAGGTAGAACATCAGA < 41bp 1 0.617068966721744 1 0.378814250230789 experiment 0.765862066556511 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715537 . . 0 27 hm5C_associated_SNPs_6463 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGGCCTGGATAGCTCAGTAGGTAGAACATCAGACT < 41bp 1 0.633801716976559 1 0.534081339836121 experiment 0.732396566046883 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715537 . . 0 25 hm5C_associated_SNPs_6464 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715545 + 28715525 28715565 41 GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACG GGATAGCTCAGTAGGTAGAACATCAGACTTTTAATCTGACG < 41bp 1 0.405647228902287 1 0.10860550403595 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715545 chr6:28715537 . . 0 13 hm5C_associated_SNPs_6465 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTAGGTAGAACATCAGACTTTTAATCTGACGGTG < 41bp 1 0.419346733614239 1 0.411146879196167 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715537 . . 0 10 hm5C_associated_SNPs_6466 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715537 28715537 1 + T A rs6909102 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTAGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG < 41bp 1 0.0701689193226492 1 0.0135670602321625 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715537 . . 0 6 hm5C_associated_SNPs_6467 0 0 64 DGCR8 POSTAR2 GSE39086,GSM955513 chr6:28715500-28715540
64251 chr6 28715545 28715545 1 + C A rs7764775 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAAAATCAGA < 41bp 1 0.600727220744065 1 0.420804172754288 experiment 0.798545558511871 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715545 . . 0 35 hm5C_associated_SNPs_6468 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715545 28715545 1 + C A rs7764775 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGGCCTGGATAGCTCAGTTGGTAGAAAATCAGACT < 41bp 1 0.399902256842661 1 0.435682952404022 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715545 . . 0 33 hm5C_associated_SNPs_6469 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715545 28715545 1 + C A rs7764775 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTTGGTAGAAAATCAGACTTTTAATCTGACGGTG < 41bp 1 0.513751903913887 1 0.45495194196701 experiment 0.972496192172227 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715545 . . 0 18 hm5C_associated_SNPs_6470 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715545 28715545 1 + C A rs7764775 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAAAATCAGACTTTTAATCTGACGGTGCAGG < 41bp 1 0.0601006143544259 1 0.0111713409423828 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715545 . . 0 14 hm5C_associated_SNPs_6471 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715545 28715545 1 + C A rs7764775 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAAAATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT < 41bp 1 0.335999372135351 1 0.43696340918541 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715545 . . 0 6 hm5C_associated_SNPs_6472 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715545 28715545 1 + C A rs7764775 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT AAATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT < 41bp 1 0.304058483446768 1 0.179170280694962 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715545 . . 0 2 hm5C_associated_SNPs_6473 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATAAGA < 41bp 1 0.616535140765143 1 0.387610077857971 experiment 0.766929718469713 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715548 . . 0 38 hm5C_associated_SNPs_6474 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATAAGACT < 41bp 1 0.357981864602734 1 0.542565822601318 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715548 . . 0 36 hm5C_associated_SNPs_6475 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715545 + 28715525 28715565 41 GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACG GGATAGCTCAGTTGGTAGAACATAAGACTTTTAATCTGACG < 41bp 1 0.379221137703325 1 0.140441060066223 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715545 chr6:28715548 . . 0 24 hm5C_associated_SNPs_6476 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAACATAAGACTTTTAATCTGACGGTGCAGG < 41bp 1 0.071206377979622 1 0.0122393071651459 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715548 . . 0 17 hm5C_associated_SNPs_6477 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAACATAAGACTTTTAATCTGACGGTGCAGGGTTCAAGT < 41bp 1 0.322736002656355 1 0.483207523822784 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715548 . . 0 9 hm5C_associated_SNPs_6478 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715548 28715548 1 + C A rs190921203 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATAAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT < 41bp 1 0.347489984915564 1 0.176241517066956 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715548 . . 0 5 hm5C_associated_SNPs_6479 0 0 76 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715531 + 28715511 28715551 41 TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGA TCTACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGG < 41bp 1 0.639447821203435 1 0.379208326339722 experiment 0.721104357593129 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715531 chr6:28715551 . . 0 41 hm5C_associated_SNPs_6480 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715533 + 28715513 28715553 41 TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGACT TACCCAGGGCCTGGATAGCTCAGTTGGTAGAACATCAGGCT < 41bp 1 0.428358113183057 1 0.471527397632599 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715533 chr6:28715551 . . 0 39 hm5C_associated_SNPs_6481 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715545 + 28715525 28715565 41 GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACG GGATAGCTCAGTTGGTAGAACATCAGGCTTTTAATCTGACG < 41bp 1 0.41385087825053 1 0.0736556947231293 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715545 chr6:28715551 . . 0 27 hm5C_associated_SNPs_6482 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTTGGTAGAACATCAGGCTTTTAATCTGACGGTG < 41bp 1 0.633856513758089 1 0.578749179840088 experiment 0.732286972483821 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715551 . . 0 24 hm5C_associated_SNPs_6483 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAACATCAGGCTTTTAATCTGACGGTGCAGG < 41bp 1 0.060011172726765 1 0.0103890597820282 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715551 . . 0 20 hm5C_associated_SNPs_6484 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAACATCAGGCTTTTAATCTGACGGTGCAGGGTTCAAGT < 41bp 1 0.369631571854892 1 0.34956568479538 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715551 . . 0 12 hm5C_associated_SNPs_6485 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATCAGGCTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT < 41bp 1 0.36378147926634 1 0.208513706922531 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715551 . . 0 8 hm5C_associated_SNPs_6486 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715551 28715551 1 + A G rs573669670 28715569 + 28715549 28715589 41 AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA AGGCTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA < 41bp 1 0.607873905194967 1 0.799299120903015 experiment 0.784252189610066 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715569 chr6:28715551 . . 0 3 hm5C_associated_SNPs_6487 0 0 75 ALKBH1 POSTAR2 GSE65299,GSM2107199 chr6:28715500-28715560
64251 chr6 28715564 28715564 1 + C A rs6929372 28715545 + 28715525 28715565 41 GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACG GGATAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGAAG < 41bp 1 0.433909970378034 1 0.109236568212509 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715545 chr6:28715564 . . 0 40 hm5C_associated_SNPs_6488 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGAAGGTG < 41bp 1 0.411315345249904 1 0.286318004131317 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715564 . . 0 37 hm5C_associated_SNPs_6489 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAACATCAGACTTTTAATCTGAAGGTGCAGG < 41bp 1 0.0631192309641954 1 0.00880056619644165 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715564 . . 0 33 hm5C_associated_SNPs_6490 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAACATCAGACTTTTAATCTGAAGGTGCAGGGTTCAAGT < 41bp 1 0.635919931142127 1 0.725741446018219 experiment 0.728160137715747 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715564 . . 0 25 hm5C_associated_SNPs_6491 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715569 + 28715549 28715589 41 AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA AGACTTTTAATCTGAAGGTGCAGGGTTCAAGTCCCTGTTCA < 41bp 1 0.626299466852517 1 0.844149827957153 experiment 0.747401066294965 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715569 chr6:28715564 . . 0 16 hm5C_associated_SNPs_6492 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715581 + 28715561 28715601 41 TGACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT TGAAGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT < 41bp 1 0.187786783881265 1 0.0215977728366852 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715581 chr6:28715564 . . 0 4 hm5C_associated_SNPs_6493 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715564 28715564 1 + C A rs6929372 28715582 + 28715562 28715602 41 GACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG GAAGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG < 41bp 1 0.115107015410806 1 0.10936975479126 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715582 chr6:28715564 . . 0 3 hm5C_associated_SNPs_6494 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715548 + 28715528 28715568 41 TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTG TAGCTCAGTTGGTAGAACATCAGACTTTTAATCTGACGATG < 41bp 1 0.41432010224852 1 0.250524699687958 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715548 chr6:28715566 . . 0 39 hm5C_associated_SNPs_6495 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAACATCAGACTTTTAATCTGACGATGCAGG < 41bp 1 0.0571881751561569 1 0.0146630704402924 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715566 . . 0 35 hm5C_associated_SNPs_6496 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAACATCAGACTTTTAATCTGACGATGCAGGGTTCAAGT < 41bp 1 0.334945859618577 1 0.253165036439896 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715566 . . 0 27 hm5C_associated_SNPs_6497 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATCAGACTTTTAATCTGACGATGCAGGGTTCAAGTCCCT < 41bp 1 0.242070104405445 1 0.0871533751487732 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715566 . . 0 23 hm5C_associated_SNPs_6498 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715569 + 28715549 28715589 41 AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA AGACTTTTAATCTGACGATGCAGGGTTCAAGTCCCTGTTCA < 41bp 1 0.666436738136591 1 0.864475250244141 experiment 0.667126523726818 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715569 chr6:28715566 . . 0 18 hm5C_associated_SNPs_6499 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715581 + 28715561 28715601 41 TGACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT TGACGATGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT < 41bp 1 0.186996409859163 1 0.0214119255542755 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715581 chr6:28715566 . . 0 6 hm5C_associated_SNPs_6500 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715566 28715566 1 + G A rs1233583 28715582 + 28715562 28715602 41 GACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG GACGATGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG < 41bp 1 0.108359625213148 1 0.128414690494537 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715582 chr6:28715566 . . 0 5 hm5C_associated_SNPs_6501 0 0 47 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715552 + 28715532 28715572 41 TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGG TCAGTTGGTAGAACATCAGACTTTTAATCTGACGGTGCAGA < 41bp 1 0.0638307434038587 1 0.010850578546524 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715552 chr6:28715572 . . 0 41 hm5C_associated_SNPs_6502 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715560 + 28715540 28715580 41 TAGAACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGT TAGAACATCAGACTTTTAATCTGACGGTGCAGAGTTCAAGT < 41bp 1 0.329114408022195 1 0.286717534065247 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715560 chr6:28715572 . . 0 33 hm5C_associated_SNPs_6503 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATCAGACTTTTAATCTGACGGTGCAGAGTTCAAGTCCCT < 41bp 1 0.31548931824236 1 0.309177100658417 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715572 . . 0 29 hm5C_associated_SNPs_6504 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715569 + 28715549 28715589 41 AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA AGACTTTTAATCTGACGGTGCAGAGTTCAAGTCCCTGTTCA < 41bp 1 0.41651661418708 1 0.356009304523468 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715569 chr6:28715572 . . 0 24 hm5C_associated_SNPs_6505 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715581 + 28715561 28715601 41 TGACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT TGACGGTGCAGAGTTCAAGTCCCTGTTCAGGCGAAATATTT < 41bp 1 0.165198670389149 1 0.0189509391784668 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715581 chr6:28715572 . . 0 12 hm5C_associated_SNPs_6506 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715582 + 28715562 28715602 41 GACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG GACGGTGCAGAGTTCAAGTCCCTGTTCAGGCGAAATATTTG < 41bp 1 0.108730722901115 1 0.0824403762817383 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715582 chr6:28715572 . . 0 11 hm5C_associated_SNPs_6507 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715572 28715572 1 + G A rs183290826 28715588 + 28715568 28715608 41 GCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTGTGTGTT GCAGAGTTCAAGTCCCTGTTCAGGCGAAATATTTGTGTGTT < 41bp 1 0.498779788542259 1 0.882076621055603 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715588 chr6:28715572 . . 0 5 hm5C_associated_SNPs_6508 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28715500-28715580
64251 chr6 28715583 28715583 1 + C T rs114227105 28715564 + 28715544 28715584 41 ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCT ACATCAGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCTT < 41bp 1 0.331006562647292 1 0.170450031757355 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715564 chr6:28715583 . . 0 40 hm5C_associated_SNPs_6509 0 0 24 SSB POSTAR2 GSE95683,GSM2521599 chr6:28715500-28715600
64251 chr6 28715583 28715583 1 + C T rs114227105 28715569 + 28715549 28715589 41 AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCCTGTTCA AGACTTTTAATCTGACGGTGCAGGGTTCAAGTCCTTGTTCA < 41bp 1 0.606129865801667 1 0.705526828765869 experiment 0.787740268396666 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715569 chr6:28715583 . . 0 35 hm5C_associated_SNPs_6510 0 0 24 SSB POSTAR2 GSE95683,GSM2521599 chr6:28715500-28715600
64251 chr6 28715583 28715583 1 + C T rs114227105 28715581 + 28715561 28715601 41 TGACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTT TGACGGTGCAGGGTTCAAGTCCTTGTTCAGGCGAAATATTT < 41bp 1 0.0958964195649766 1 0.0188327133655548 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715581 chr6:28715583 . . 0 23 hm5C_associated_SNPs_6511 0 0 24 SSB POSTAR2 GSE95683,GSM2521599 chr6:28715500-28715600
64251 chr6 28715583 28715583 1 + C T rs114227105 28715582 + 28715562 28715602 41 GACGGTGCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTG GACGGTGCAGGGTTCAAGTCCTTGTTCAGGCGAAATATTTG < 41bp 1 0.211832623323975 1 0.15893480181694 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715582 chr6:28715583 . . 0 22 hm5C_associated_SNPs_6512 0 0 24 SSB POSTAR2 GSE95683,GSM2521599 chr6:28715500-28715600
64251 chr6 28715583 28715583 1 + C T rs114227105 28715588 + 28715568 28715608 41 GCAGGGTTCAAGTCCCTGTTCAGGCGAAATATTTGTGTGTT GCAGGGTTCAAGTCCTTGTTCAGGCGAAATATTTGTGTGTT < 41bp 1 0.532464312812421 1 0.940068542957306 experiment 0.935071374375157 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00533;LINC01623 ENSG00000237425;ENSG00000221191 intergenic Human other chr6:28715588 chr6:28715583 . . 0 16 hm5C_associated_SNPs_6513 0 0 24 SSB POSTAR2 GSE95683,GSM2521599 chr6:28715500-28715600
64251 chr6 28849200 28849200 1 + G A rs187763979 28849199 + 28849179 28849219 41 ATGGATAAGGCGTCTGATTCCGGATCAGAAGATTGAGGGTT ATGGATAAGGCGTCTGATTCCAGATCAGAAGATTGAGGGTT < 41bp 1 0.50282607664996 1 0.413192540407181 experiment 0.994347846700079 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01623;HCG14 ENSG00000225595;ENSG00000233366 intergenic Human other chr6:28849199 chr6:28849200 . . 0 22 hm5C_associated_SNPs_6514 0 0 88 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:28849160-28849240
64251 chr6 28849200 28849200 1 + G A rs187763979 28849204 + 28849184 28849224 41 TAAGGCGTCTGATTCCGGATCAGAAGATTGAGGGTTCGAGT TAAGGCGTCTGATTCCAGATCAGAAGATTGAGGGTTCGAGT < 41bp 1 0.676812427349758 1 0.359048038721085 experiment 0.646375145300483 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01623;HCG14 ENSG00000225595;ENSG00000233366 intergenic Human other chr6:28849204 chr6:28849200 . . 0 17 hm5C_associated_SNPs_6515 0 0 88 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:28849160-28849240
64251 chr6 28849200 28849200 1 + G A rs187763979 28849220 + 28849200 28849240 41 GGATCAGAAGATTGAGGGTTCGAGTCCCTTCGTGGTCGTCG AGATCAGAAGATTGAGGGTTCGAGTCCCTTCGTGGTCGTCG < 41bp 1 0.404477587554762 1 0.131667792797089 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01623;HCG14 ENSG00000225595;ENSG00000233366 intergenic Human other chr6:28849220 chr6:28849200 . . 0 1 hm5C_associated_SNPs_6516 0 0 88 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:28849160-28849240
64251 chr6 28908871 28908871 1 + G A rs561405553 28908857 + 28908837 28908877 41 TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCC TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTAGCTTCC < 41bp 1 0.530080953344419 1 0.546150147914886 experiment 0.939838093311163 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908857 chr6:28908871 . . 0 35 hm5C_associated_SNPs_6517 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908858 + 28908838 28908878 41 GGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCT GGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTAGCTTCCT < 41bp 1 0.317900523671468 1 0.531378388404846 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908858 chr6:28908871 . . 0 34 hm5C_associated_SNPs_6518 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908862 + 28908842 28908882 41 GAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTG GAGTGGTCTAAGGCGCCAGACTCAAGCTTAGCTTCCTCGTG < 41bp 1 0.651186185260727 1 0.799449980258942 experiment 0.697627629478547 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908862 chr6:28908871 . . 0 30 hm5C_associated_SNPs_6519 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908864 + 28908844 28908884 41 GTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTT GTGGTCTAAGGCGCCAGACTCAAGCTTAGCTTCCTCGTGTT < 41bp 1 0.665523961600955 1 0.829467535018921 experiment 0.66895207679809 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908864 chr6:28908871 . . 0 28 hm5C_associated_SNPs_6520 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908868 + 28908848 28908888 41 TCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGG TCTAAGGCGCCAGACTCAAGCTTAGCTTCCTCGTGTTGAGG < 41bp 1 0.240189636885845 1 0.138229668140411 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908868 chr6:28908871 . . 0 24 hm5C_associated_SNPs_6521 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908873 + 28908853 28908893 41 GGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCT GGCGCCAGACTCAAGCTTAGCTTCCTCGTGTTGAGGATTCT < 41bp 1 0.0915380683655583 1 0.0498633980751038 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908873 chr6:28908871 . . 0 19 hm5C_associated_SNPs_6522 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908876 + 28908856 28908896 41 GCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGT GCCAGACTCAAGCTTAGCTTCCTCGTGTTGAGGATTCTGGT < 41bp 1 0.116283268102252 1 0.121373474597931 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908876 chr6:28908871 . . 0 16 hm5C_associated_SNPs_6523 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908877 + 28908857 28908897 41 CCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTC CCAGACTCAAGCTTAGCTTCCTCGTGTTGAGGATTCTGGTC < 41bp 1 0.627747404651179 1 0.173450857400894 experiment 0.744505190697643 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908877 chr6:28908871 . . 0 15 hm5C_associated_SNPs_6524 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908871 28908871 1 + G A rs561405553 28908879 + 28908859 28908899 41 AGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTCTC AGACTCAAGCTTAGCTTCCTCGTGTTGAGGATTCTGGTCTC < 41bp 1 0.635287705192453 1 0.56265664100647 experiment 0.729424589615093 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908879 chr6:28908871 . . 0 13 hm5C_associated_SNPs_6525 0 0 56 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908857 + 28908837 28908877 41 TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCC TGGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGATTCC < 41bp 1 0.531030206992004 1 0.308385968208313 experiment 0.937939586015991 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908857 chr6:28908873 . . 0 37 hm5C_associated_SNPs_6526 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908858 + 28908838 28908878 41 GGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCT GGCCGAGTGGTCTAAGGCGCCAGACTCAAGCTTGGATTCCT < 41bp 1 0.298740796543105 1 0.433180153369904 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908858 chr6:28908873 . . 0 36 hm5C_associated_SNPs_6527 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908862 + 28908842 28908882 41 GAGTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTG GAGTGGTCTAAGGCGCCAGACTCAAGCTTGGATTCCTCGTG < 41bp 1 0.669512748908307 1 0.906908750534058 experiment 0.660974502183385 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908862 chr6:28908873 . . 0 32 hm5C_associated_SNPs_6528 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908864 + 28908844 28908884 41 GTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTT GTGGTCTAAGGCGCCAGACTCAAGCTTGGATTCCTCGTGTT < 41bp 1 0.674668509146668 1 0.8374844789505 experiment 0.650662981706664 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908864 chr6:28908873 . . 0 30 hm5C_associated_SNPs_6529 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908868 + 28908848 28908888 41 TCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGG TCTAAGGCGCCAGACTCAAGCTTGGATTCCTCGTGTTGAGG < 41bp 1 0.512719408783683 1 0.394286274909973 experiment 0.974561182432633 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908868 chr6:28908873 . . 0 26 hm5C_associated_SNPs_6530 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908876 + 28908856 28908896 41 GCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGT GCCAGACTCAAGCTTGGATTCCTCGTGTTGAGGATTCTGGT < 41bp 1 0.17458274939858 1 0.284501910209656 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908876 chr6:28908873 . . 0 18 hm5C_associated_SNPs_6531 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908877 + 28908857 28908897 41 CCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTC CCAGACTCAAGCTTGGATTCCTCGTGTTGAGGATTCTGGTC < 41bp 1 0.670873381345628 1 0.176388770341873 experiment 0.658253237308744 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908877 chr6:28908873 . . 0 17 hm5C_associated_SNPs_6532 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908879 + 28908859 28908899 41 AGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTCTC AGACTCAAGCTTGGATTCCTCGTGTTGAGGATTCTGGTCTC < 41bp 1 0.696838788409797 1 0.404260993003845 experiment 0.606322423180405 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908879 chr6:28908873 . . 0 15 hm5C_associated_SNPs_6533 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908873 28908873 1 + C A rs115765101 28908892 + 28908872 28908912 41 GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG GATTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG < 41bp 1 0.732176893229455 1 0.203225642442703 experiment 0.53564621354109 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908892 chr6:28908873 . . 0 2 hm5C_associated_SNPs_6534 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480476 chr6:28908860-28908880
64251 chr6 28908884 28908884 1 + T A rs186807724 28908864 + 28908844 28908884 41 GTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTT GTGGTCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTA < 41bp 1 0.718914306832129 1 0.856616914272308 experiment 0.562171386335742 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908864 chr6:28908884 . . 0 41 hm5C_associated_SNPs_6535 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908868 + 28908848 28908888 41 TCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGG TCTAAGGCGCCAGACTCAAGCTTGGCTTCCTCGTGTAGAGG < 41bp 1 0.50081436063761 1 0.212281227111816 experiment 0.99837127872478 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908868 chr6:28908884 . . 0 37 hm5C_associated_SNPs_6536 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908873 + 28908853 28908893 41 GGCGCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCT GGCGCCAGACTCAAGCTTGGCTTCCTCGTGTAGAGGATTCT < 41bp 1 0.0634899186227859 1 0.0494204461574554 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908873 chr6:28908884 . . 0 32 hm5C_associated_SNPs_6537 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908876 + 28908856 28908896 41 GCCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGT GCCAGACTCAAGCTTGGCTTCCTCGTGTAGAGGATTCTGGT < 41bp 1 0.131597848771821 1 0.103273302316666 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908876 chr6:28908884 . . 0 29 hm5C_associated_SNPs_6538 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908877 + 28908857 28908897 41 CCAGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTC CCAGACTCAAGCTTGGCTTCCTCGTGTAGAGGATTCTGGTC < 41bp 1 0.662674439561618 1 0.0823101103305817 experiment 0.674651120876764 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908877 chr6:28908884 . . 0 28 hm5C_associated_SNPs_6539 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908879 + 28908859 28908899 41 AGACTCAAGCTTGGCTTCCTCGTGTTGAGGATTCTGGTCTC AGACTCAAGCTTGGCTTCCTCGTGTAGAGGATTCTGGTCTC < 41bp 1 0.68498135088178 1 0.700316429138184 experiment 0.630037298236441 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908879 chr6:28908884 . . 0 26 hm5C_associated_SNPs_6540 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908892 + 28908872 28908912 41 GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG GCTTCCTCGTGTAGAGGATTCTGGTCTCCAATGGAGGCGTG < 41bp 1 0.746172325022322 1 0.0725059807300568 experiment 0.507655349955356 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908892 chr6:28908884 . . 0 13 hm5C_associated_SNPs_6541 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908897 + 28908877 28908917 41 CTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTC CTCGTGTAGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTC < 41bp 1 0.737887703030321 1 0.934628963470459 experiment 0.524224593939357 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908897 chr6:28908884 . . 0 8 hm5C_associated_SNPs_6542 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908899 + 28908879 28908919 41 CGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGA CGTGTAGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGA < 41bp 1 0.215200923686091 1 0.776187181472778 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908899 chr6:28908884 . . 0 6 hm5C_associated_SNPs_6543 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908884 28908884 1 + T A rs186807724 28908900 + 28908880 28908920 41 GTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGAA GTGTAGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGAA < 41bp 1 0.474677155162901 1 0.4698126912117 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908900 chr6:28908884 . . 0 5 hm5C_associated_SNPs_6544 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:28908880-28908900
64251 chr6 28908903 28908903 1 + T C rs568260917 28908892 + 28908872 28908912 41 GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG GCTTCCTCGTGTTGAGGATTCTGGTCTCCAACGGAGGCGTG < 41bp 1 0.750159609036213 1 0.129326045513153 experiment 0.499680781927574 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908892 chr6:28908903 . . 0 32 hm5C_associated_SNPs_6545 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908897 + 28908877 28908917 41 CTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTC CTCGTGTTGAGGATTCTGGTCTCCAACGGAGGCGTGGGTTC < 41bp 1 0.670066147983455 1 0.952813923358917 experiment 0.65986770403309 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908897 chr6:28908903 . . 0 27 hm5C_associated_SNPs_6546 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908899 + 28908879 28908919 41 CGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGA CGTGTTGAGGATTCTGGTCTCCAACGGAGGCGTGGGTTCGA < 41bp 1 0.147157834476621 1 0.529223144054413 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908899 chr6:28908903 . . 0 25 hm5C_associated_SNPs_6547 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908900 + 28908880 28908920 41 GTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGAA GTGTTGAGGATTCTGGTCTCCAACGGAGGCGTGGGTTCGAA < 41bp 1 0.644511547372711 1 0.250674962997437 experiment 0.710976905254578 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908900 chr6:28908903 . . 0 24 hm5C_associated_SNPs_6548 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908909 + 28908889 28908929 41 ATTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTC ATTCTGGTCTCCAACGGAGGCGTGGGTTCGAATCCCACTTC < 41bp 1 0.704707152971413 1 0.609148025512695 experiment 0.590585694057174 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908909 chr6:28908903 . . 0 15 hm5C_associated_SNPs_6549 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908917 + 28908897 28908937 41 CTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAA CTCCAACGGAGGCGTGGGTTCGAATCCCACTTCTGACACAA < 41bp 1 0.332587756047952 1 0.29418820142746 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908917 chr6:28908903 . . 0 7 hm5C_associated_SNPs_6550 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908922 + 28908902 28908942 41 ATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC ACGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC < 41bp 1 0.152481638338913 1 0.0812102854251862 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908922 chr6:28908903 . . 0 2 hm5C_associated_SNPs_6551 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908903 28908903 1 + T C rs568260917 28908923 + 28908903 28908943 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT CGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT < 41bp 1 0.124162285033495 1 0.110442280769348 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908923 chr6:28908903 . . 0 1 hm5C_associated_SNPs_6552 0 0 123 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908892 + 28908872 28908912 41 GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATAGAGGCGTG < 41bp 1 0.765840443510681 1 0.233476579189301 experiment 0.468319112978637 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908892 chr6:28908904 . . 0 33 hm5C_associated_SNPs_6553 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908897 + 28908877 28908917 41 CTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTC CTCGTGTTGAGGATTCTGGTCTCCAATAGAGGCGTGGGTTC < 41bp 1 0.702049309453824 1 0.939055979251862 experiment 0.595901381092351 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908897 chr6:28908904 . . 0 28 hm5C_associated_SNPs_6554 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908899 + 28908879 28908919 41 CGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGA CGTGTTGAGGATTCTGGTCTCCAATAGAGGCGTGGGTTCGA < 41bp 1 0.14986166055369 1 0.756677031517029 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908899 chr6:28908904 . . 0 26 hm5C_associated_SNPs_6555 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908900 + 28908880 28908920 41 GTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGAA GTGTTGAGGATTCTGGTCTCCAATAGAGGCGTGGGTTCGAA < 41bp 1 0.546648291818157 1 0.252775907516479 experiment 0.906703416363686 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908900 chr6:28908904 . . 0 25 hm5C_associated_SNPs_6556 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908909 + 28908889 28908929 41 ATTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTC ATTCTGGTCTCCAATAGAGGCGTGGGTTCGAATCCCACTTC < 41bp 1 0.665537717626415 1 0.398164331912994 experiment 0.66892456474717 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908909 chr6:28908904 . . 0 16 hm5C_associated_SNPs_6557 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908917 + 28908897 28908937 41 CTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAA CTCCAATAGAGGCGTGGGTTCGAATCCCACTTCTGACACAA < 41bp 1 0.274776008395532 1 0.325863599777222 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908917 chr6:28908904 . . 0 8 hm5C_associated_SNPs_6558 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908922 + 28908902 28908942 41 ATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC ATAGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC < 41bp 1 0.139874696550169 1 0.0901341736316681 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908922 chr6:28908904 . . 0 3 hm5C_associated_SNPs_6559 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908923 + 28908903 28908943 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT TAGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT < 41bp 1 0.111501555069773 1 0.0976963043212891 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908923 chr6:28908904 . . 0 2 hm5C_associated_SNPs_6560 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908904 28908904 1 + G A rs62407911 28908924 + 28908904 28908944 41 GGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTT AGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTT < 41bp 1 0.174103493700418 1 0.0438666343688965 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908924 chr6:28908904 . . 0 1 hm5C_associated_SNPs_6561 0 0 120 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908892 + 28908872 28908912 41 GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTG GCTTCCTCGTGTTGAGGATTCTGGTCTCCAATGGAGGGGTG < 41bp 1 0.76150108021207 1 0.167172998189926 experiment 0.476997839575861 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908892 chr6:28908909 . . 0 38 hm5C_associated_SNPs_6562 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908897 + 28908877 28908917 41 CTCGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTC CTCGTGTTGAGGATTCTGGTCTCCAATGGAGGGGTGGGTTC < 41bp 1 0.718062996903984 1 0.961098551750183 experiment 0.563874006192031 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908897 chr6:28908909 . . 0 33 hm5C_associated_SNPs_6563 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908899 + 28908879 28908919 41 CGTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGA CGTGTTGAGGATTCTGGTCTCCAATGGAGGGGTGGGTTCGA < 41bp 1 0.183585007422526 1 0.747731626033783 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908899 chr6:28908909 . . 0 31 hm5C_associated_SNPs_6564 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908900 + 28908880 28908920 41 GTGTTGAGGATTCTGGTCTCCAATGGAGGCGTGGGTTCGAA GTGTTGAGGATTCTGGTCTCCAATGGAGGGGTGGGTTCGAA < 41bp 1 0.419742826074098 1 0.221477419137955 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908900 chr6:28908909 . . 0 30 hm5C_associated_SNPs_6565 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908917 + 28908897 28908937 41 CTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAA CTCCAATGGAGGGGTGGGTTCGAATCCCACTTCTGACACAA < 41bp 1 0.344226889622433 1 0.40205180644989 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908917 chr6:28908909 . . 0 13 hm5C_associated_SNPs_6566 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908922 + 28908902 28908942 41 ATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC ATGGAGGGGTGGGTTCGAATCCCACTTCTGACACAACTATC < 41bp 1 0.182939729628108 1 0.123849838972092 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908922 chr6:28908909 . . 0 8 hm5C_associated_SNPs_6567 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908923 + 28908903 28908943 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT TGGAGGGGTGGGTTCGAATCCCACTTCTGACACAACTATCT < 41bp 1 0.138175876774266 1 0.108037501573563 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908923 chr6:28908909 . . 0 7 hm5C_associated_SNPs_6568 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908924 + 28908904 28908944 41 GGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTT GGAGGGGTGGGTTCGAATCCCACTTCTGACACAACTATCTT < 41bp 1 0.208818293280923 1 0.0496914386749268 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908924 chr6:28908909 . . 0 6 hm5C_associated_SNPs_6569 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908926 + 28908906 28908946 41 AGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTTAT AGGGGTGGGTTCGAATCCCACTTCTGACACAACTATCTTAT < 41bp 1 0.138936618459147 1 0.167745560407639 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908926 chr6:28908909 . . 0 4 hm5C_associated_SNPs_6570 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908909 28908909 1 + C G rs58800808 28908929 + 28908909 28908949 41 CGTGGGTTCGAATCCCACTTCTGACACAACTATCTTATTCT GGTGGGTTCGAATCCCACTTCTGACACAACTATCTTATTCT < 41bp 1 0.141278433485056 1 0.246714264154434 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908929 chr6:28908909 . . 0 1 hm5C_associated_SNPs_6571 0 0 124 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28908900-28908920
64251 chr6 28908928 28908928 1 + T A rs376005893 28908909 + 28908889 28908929 41 ATTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTTC ATTCTGGTCTCCAATGGAGGCGTGGGTTCGAATCCCACTAC < 41bp 1 0.70517753739017 1 0.719803690910339 experiment 0.589644925219661 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908909 chr6:28908928 . . 0 40 hm5C_associated_SNPs_6572 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908917 + 28908897 28908937 41 CTCCAATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAA CTCCAATGGAGGCGTGGGTTCGAATCCCACTACTGACACAA < 41bp 1 0.274878027506576 1 0.224837213754654 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908917 chr6:28908928 . . 0 32 hm5C_associated_SNPs_6573 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908922 + 28908902 28908942 41 ATGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATC ATGGAGGCGTGGGTTCGAATCCCACTACTGACACAACTATC < 41bp 1 0.129412901218709 1 0.137565314769745 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908922 chr6:28908928 . . 0 27 hm5C_associated_SNPs_6574 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908923 + 28908903 28908943 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCT TGGAGGCGTGGGTTCGAATCCCACTACTGACACAACTATCT < 41bp 1 0.114278558236969 1 0.137169122695923 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908923 chr6:28908928 . . 0 26 hm5C_associated_SNPs_6575 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908924 + 28908904 28908944 41 GGAGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTT GGAGGCGTGGGTTCGAATCCCACTACTGACACAACTATCTT < 41bp 1 0.482786612409745 1 0.141683906316757 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908924 chr6:28908928 . . 0 25 hm5C_associated_SNPs_6576 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908926 + 28908906 28908946 41 AGGCGTGGGTTCGAATCCCACTTCTGACACAACTATCTTAT AGGCGTGGGTTCGAATCCCACTACTGACACAACTATCTTAT < 41bp 1 0.287363567065329 1 0.261300295591354 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908926 chr6:28908928 . . 0 23 hm5C_associated_SNPs_6577 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908929 + 28908909 28908949 41 CGTGGGTTCGAATCCCACTTCTGACACAACTATCTTATTCT CGTGGGTTCGAATCCCACTACTGACACAACTATCTTATTCT < 41bp 1 0.105977402847635 1 0.125333249568939 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908929 chr6:28908928 . . 0 20 hm5C_associated_SNPs_6578 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28908928 28908928 1 + T A rs376005893 28908933 + 28908913 28908953 41 GGTTCGAATCCCACTTCTGACACAACTATCTTATTCTCCTT GGTTCGAATCCCACTACTGACACAACTATCTTATTCTCCTT < 41bp 1 0.565982689083897 1 0.121570348739624 experiment 0.868034621832207 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target TRIM27;LINC01556 ENSG00000204713;ENSG00000204709 intergenic Human other chr6:28908933 chr6:28908928 . . 0 16 hm5C_associated_SNPs_6579 0 0 78 SSB POSTAR2 GSE95683,GSM2521599 chr6:28908820-28908940
64251 chr6 28912399 28912399 1 + C T rs140736187 28912379 + 28912359 28912399 41 TAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTC TAGCGCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTT < 41bp 1 0.168304466365856 1 0.401129573583603 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912379 chr6:28912399 . . 0 41 hm5C_associated_SNPs_6580 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912383 + 28912363 28912403 41 GCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGA GCAGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTTCTGA < 41bp 1 0.339458155693471 1 0.0637030303478241 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912383 chr6:28912399 . . 0 37 hm5C_associated_SNPs_6581 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912385 + 28912365 28912405 41 AGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGT AGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTTCTGAGT < 41bp 1 0.640820997474575 1 0.640815138816833 experiment 0.71835800505085 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912385 chr6:28912399 . . 0 35 hm5C_associated_SNPs_6582 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912391 + 28912371 28912411 41 CAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGTTCGAAC CAGCGCGTCAGTCTCATAATCTGAAGGTTCTGAGTTCGAAC < 41bp 1 0.744973036311549 1 0.362270057201385 experiment 0.510053927376902 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912391 chr6:28912399 . . 0 29 hm5C_associated_SNPs_6583 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912400 + 28912380 28912420 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGG AGTCTCATAATCTGAAGGTTCTGAGTTCGAACCTCAGAGGG < 41bp 1 0.696323799542647 1 0.483280003070831 experiment 0.607352400914707 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912400 chr6:28912399 . . 0 20 hm5C_associated_SNPs_6584 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912407 + 28912387 28912427 41 TAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGG TAATCTGAAGGTTCTGAGTTCGAACCTCAGAGGGGGCAAGG < 41bp 1 0.195006900748496 1 0.0853418409824371 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912407 chr6:28912399 . . 0 13 hm5C_associated_SNPs_6585 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912411 + 28912391 28912431 41 CTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTC CTGAAGGTTCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTC < 41bp 1 0.246039258940604 1 0.0828206241130829 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912411 chr6:28912399 . . 0 9 hm5C_associated_SNPs_6586 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912412 + 28912392 28912432 41 TGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCT TGAAGGTTCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCT < 41bp 1 0.447157206427926 1 0.176625341176987 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912412 chr6:28912399 . . 0 8 hm5C_associated_SNPs_6587 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912399 28912399 1 + C T rs140736187 28912414 + 28912394 28912434 41 AAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCTGT AAGGTTCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCTGT < 41bp 1 0.604120912938498 1 0.8383908867836 experiment 0.791758174123004 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912414 chr6:28912399 . . 0 6 hm5C_associated_SNPs_6588 0 1 28 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28912380-28912400
64251 chr6 28912405 28912405 1 + T C rs9257397 28912385 + 28912365 28912405 41 AGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGT AGTAGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGC < 41bp 1 0.68885943431005 1 0.629127621650696 experiment 0.622281131379899 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912385 chr6:28912405 . . 0 41 hm5C_associated_SNPs_6589 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912391 + 28912371 28912411 41 CAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGTTCGAAC CAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGCTCGAAC < 41bp 1 0.764358152975479 1 0.376034826040268 experiment 0.471283694049041 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912391 chr6:28912405 . . 0 35 hm5C_associated_SNPs_6590 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912399 + 28912379 28912419 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGG CAGTCTCATAATCTGAAGGTCCTGAGCTCGAACCTCAGAGG < 41bp 1 0.252210823096068 1 0.112692713737488 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912399 chr6:28912405 . . 0 27 hm5C_associated_SNPs_6591 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912400 + 28912380 28912420 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGG AGTCTCATAATCTGAAGGTCCTGAGCTCGAACCTCAGAGGG < 41bp 1 0.582913453951621 1 0.295389592647552 experiment 0.834173092096759 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912400 chr6:28912405 . . 0 26 hm5C_associated_SNPs_6592 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912407 + 28912387 28912427 41 TAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGG TAATCTGAAGGTCCTGAGCTCGAACCTCAGAGGGGGCAAGG < 41bp 1 0.212196644302133 1 0.0794290602207184 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912407 chr6:28912405 . . 0 19 hm5C_associated_SNPs_6593 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912411 + 28912391 28912431 41 CTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTC CTGAAGGTCCTGAGCTCGAACCTCAGAGGGGGCAAGGCGTC < 41bp 1 0.258222799423164 1 0.245249837636948 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912411 chr6:28912405 . . 0 15 hm5C_associated_SNPs_6594 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912412 + 28912392 28912432 41 TGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCT TGAAGGTCCTGAGCTCGAACCTCAGAGGGGGCAAGGCGTCT < 41bp 1 0.450567188279729 1 0.275699585676193 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912412 chr6:28912405 . . 0 14 hm5C_associated_SNPs_6595 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912414 + 28912394 28912434 41 AAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCTGT AAGGTCCTGAGCTCGAACCTCAGAGGGGGCAAGGCGTCTGT < 41bp 1 0.65939672931502 1 0.862670660018921 experiment 0.68120654136996 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912414 chr6:28912405 . . 0 12 hm5C_associated_SNPs_6596 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912405 28912405 1 + T C rs9257397 28912423 + 28912403 28912443 41 AGTTCGAACCTCAGAGGGGGCAAGGCGTCTGTTTTGCCATT AGCTCGAACCTCAGAGGGGGCAAGGCGTCTGTTTTGCCATT < 41bp 1 0.475840486770716 1 0.438976585865021 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912423 chr6:28912405 . . 0 3 hm5C_associated_SNPs_6597 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912399 + 28912379 28912419 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGG CAGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAAG < 41bp 1 0.317207137740798 1 0.0877713561058044 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912399 chr6:28912418 . . 0 40 hm5C_associated_SNPs_6598 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912400 + 28912380 28912420 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGG AGTCTCATAATCTGAAGGTCCTGAGTTCGAACCTCAGAAGG < 41bp 1 0.604284438927009 1 0.324364721775055 experiment 0.791431122145982 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912400 chr6:28912418 . . 0 39 hm5C_associated_SNPs_6599 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912407 + 28912387 28912427 41 TAATCTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGG TAATCTGAAGGTCCTGAGTTCGAACCTCAGAAGGGGCAAGG < 41bp 1 0.197687119644251 1 0.138507276773453 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912407 chr6:28912418 . . 0 32 hm5C_associated_SNPs_6600 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912411 + 28912391 28912431 41 CTGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTC CTGAAGGTCCTGAGTTCGAACCTCAGAAGGGGCAAGGCGTC < 41bp 1 0.220541186890246 1 0.114237934350967 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912411 chr6:28912418 . . 0 28 hm5C_associated_SNPs_6601 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912412 + 28912392 28912432 41 TGAAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCT TGAAGGTCCTGAGTTCGAACCTCAGAAGGGGCAAGGCGTCT < 41bp 1 0.4300328751986 1 0.115544140338898 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912412 chr6:28912418 . . 0 27 hm5C_associated_SNPs_6602 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912414 + 28912394 28912434 41 AAGGTCCTGAGTTCGAACCTCAGAGGGGGCAAGGCGTCTGT AAGGTCCTGAGTTCGAACCTCAGAAGGGGCAAGGCGTCTGT < 41bp 1 0.706405536955795 1 0.829267263412476 experiment 0.587188926088411 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912414 chr6:28912418 . . 0 25 hm5C_associated_SNPs_6603 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28912418 28912418 1 + G A rs150109832 28912423 + 28912403 28912443 41 AGTTCGAACCTCAGAGGGGGCAAGGCGTCTGTTTTGCCATT AGTTCGAACCTCAGAAGGGGCAAGGCGTCTGTTTTGCCATT < 41bp 1 0.500577530472775 1 0.297457873821259 experiment 0.99884493905445 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556 ENSG00000204709 downstream Human lincRNA chr6:28912423 chr6:28912418 . . 0 16 hm5C_associated_SNPs_6604 0 0 63 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28912380-28912420
64251 chr6 28918809 28918809 1 + C A rs182035589 28918807 + 28918787 28918827 41 AAGAAGGCTTTTGCAGGGAGCCCGGATAGCTCAGTCGGTAG AAGAAGGCTTTTGCAGGGAGCCAGGATAGCTCAGTCGGTAG < 41bp 1 0.473799621888823 1 0.771196484565735 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918807 chr6:28918809 . . 0 23 hm5C_associated_SNPs_6605 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918809 28918809 1 + C A rs182035589 28918816 + 28918796 28918836 41 TTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGA TTTGCAGGGAGCCAGGATAGCTCAGTCGGTAGAGCATCAGA < 41bp 1 0.626119405723379 1 0.133938491344452 experiment 0.747761188553243 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918816 chr6:28918809 . . 0 14 hm5C_associated_SNPs_6606 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918809 28918809 1 + C A rs182035589 28918822 + 28918802 28918842 41 GGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA GGGAGCCAGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA < 41bp 1 0.642159591183851 1 0.287237703800201 experiment 0.715680817632297 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918822 chr6:28918809 . . 0 8 hm5C_associated_SNPs_6607 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918816 + 28918796 28918836 41 TTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGA TTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAGTATCAGA < 41bp 1 0.654933463349464 1 0.163043588399887 experiment 0.690133073301072 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918816 chr6:28918830 . . 0 35 hm5C_associated_SNPs_6608 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918822 + 28918802 28918842 41 GGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA GGGAGCCCGGATAGCTCAGTCGGTAGAGTATCAGACTTTTA < 41bp 1 0.592777818108538 1 0.400929510593414 experiment 0.814444363782924 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918822 chr6:28918830 . . 0 29 hm5C_associated_SNPs_6609 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918833 + 28918813 28918853 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGTATCAGACTTTTAATCTGAGGGTC < 41bp 1 0.450780226614388 1 0.421793311834335 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918833 chr6:28918830 . . 0 18 hm5C_associated_SNPs_6610 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGTATCAGACTTTTAATCTGAGGGTCCAGG < 41bp 1 0.0345378424666912 1 0.00566989183425903 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918830 . . 0 14 hm5C_associated_SNPs_6611 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918830 28918830 1 + C T rs376954407 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGTATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.607637447998478 1 0.792043566703796 experiment 0.784725104003043 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918830 . . 0 6 hm5C_associated_SNPs_6612 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918816 + 28918796 28918836 41 TTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGA TTTGCAGGGAGCCCGGATAGCTCAGTCGGTAGAGCCTCAGA < 41bp 1 0.701163631976687 1 0.307188272476196 experiment 0.597672736046626 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918816 chr6:28918831 . . 0 36 hm5C_associated_SNPs_6613 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918822 + 28918802 28918842 41 GGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA GGGAGCCCGGATAGCTCAGTCGGTAGAGCCTCAGACTTTTA < 41bp 1 0.624514072260281 1 0.53395414352417 experiment 0.750971855479438 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918822 chr6:28918831 . . 0 30 hm5C_associated_SNPs_6614 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918830 + 28918810 28918850 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGCCTCAGACTTTTAATCTGAGG < 41bp 1 0.18429841484611 1 0.0677320063114166 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918830 chr6:28918831 . . 0 22 hm5C_associated_SNPs_6615 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918833 + 28918813 28918853 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGCCTCAGACTTTTAATCTGAGGGTC < 41bp 1 0.348123158053922 1 0.590314388275146 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918833 chr6:28918831 . . 0 19 hm5C_associated_SNPs_6616 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGCCTCAGACTTTTAATCTGAGGGTCCAGG < 41bp 1 0.0379876761123864 1 0.00775590538978577 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918831 . . 0 15 hm5C_associated_SNPs_6617 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918831 28918831 1 + A C rs181736432 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGCCTCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.565892416063669 1 0.836913824081421 experiment 0.868215167872663 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918831 . . 0 7 hm5C_associated_SNPs_6618 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:28918798-28918836
64251 chr6 28918838 28918838 1 + T A rs149655948 28918822 + 28918802 28918842 41 GGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA GGGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACATTTA < 41bp 1 0.616812129048215 1 0.268179476261139 experiment 0.76637574190357 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918822 chr6:28918838 . . 0 37 hm5C_associated_SNPs_6619 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918830 + 28918810 28918850 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGCATCAGACATTTAATCTGAGG < 41bp 1 0.404276613271992 1 0.113975673913956 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918830 chr6:28918838 . . 0 29 hm5C_associated_SNPs_6620 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918833 + 28918813 28918853 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGCATCAGACATTTAATCTGAGGGTC < 41bp 1 0.347702303681388 1 0.471276074647903 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918833 chr6:28918838 . . 0 26 hm5C_associated_SNPs_6621 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGCATCAGACATTTAATCTGAGGGTCCAGG < 41bp 1 0.0438599563926972 1 0.01036137342453 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918838 . . 0 22 hm5C_associated_SNPs_6622 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGCATCAGACATTTAATCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.610945159126896 1 0.727180063724518 experiment 0.778109681746208 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918838 . . 0 14 hm5C_associated_SNPs_6623 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918853 + 28918833 28918873 41 CAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC CAGACATTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC < 41bp 1 0.399009650797273 1 0.4949971139431 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918853 chr6:28918838 . . 0 6 hm5C_associated_SNPs_6624 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918838 28918838 1 + T A rs149655948 28918854 + 28918834 28918874 41 AGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG AGACATTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG < 41bp 1 0.774784735772828 1 0.803778767585754 experiment 0.450430528454343 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918854 chr6:28918838 . . 0 5 hm5C_associated_SNPs_6625 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918830 + 28918810 28918850 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAACCTGAGG < 41bp 1 0.398385516381408 1 0.106184184551239 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918830 chr6:28918844 . . 0 35 hm5C_associated_SNPs_6626 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918833 + 28918813 28918853 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGCATCAGACTTTTAACCTGAGGGTC < 41bp 1 0.343587148410341 1 0.560106575489044 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918833 chr6:28918844 . . 0 32 hm5C_associated_SNPs_6627 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGCATCAGACTTTTAACCTGAGGGTCCAGG < 41bp 1 0.0400254570612038 1 0.00829076766967773 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918844 . . 0 28 hm5C_associated_SNPs_6628 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGCATCAGACTTTTAACCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.57727611122593 1 0.758350253105164 experiment 0.84544777754814 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918844 . . 0 20 hm5C_associated_SNPs_6629 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918853 + 28918833 28918873 41 CAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC CAGACTTTTAACCTGAGGGTCCAGGGTTCAAGTCCCTGTTC < 41bp 1 0.415023901037167 1 0.423372685909271 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918853 chr6:28918844 . . 0 12 hm5C_associated_SNPs_6630 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918844 28918844 1 + T C rs147350039 28918854 + 28918834 28918874 41 AGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG AGACTTTTAACCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG < 41bp 1 0.758890619472005 1 0.775124549865723 experiment 0.48221876105599 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918854 chr6:28918844 . . 0 11 hm5C_associated_SNPs_6631 0 0 47 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:28918798-28918845
64251 chr6 28918850 28918850 1 + G A rs534455894 28918830 + 28918810 28918850 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGA < 41bp 1 0.391750923192867 1 0.0730721056461334 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918830 chr6:28918850 . . 0 41 hm5C_associated_SNPs_6632 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918833 + 28918813 28918853 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGAGTC < 41bp 1 0.354920394209304 1 0.480688601732254 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918833 chr6:28918850 . . 0 38 hm5C_associated_SNPs_6633 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGAGTCCAGG < 41bp 1 0.0329940280068187 1 0.00919029116630554 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918850 . . 0 34 hm5C_associated_SNPs_6634 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGCATCAGACTTTTAATCTGAGAGTCCAGGGTTCAAGT < 41bp 1 0.55373905395824 1 0.657810032367706 experiment 0.89252189208352 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918850 . . 0 26 hm5C_associated_SNPs_6635 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918853 + 28918833 28918873 41 CAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC CAGACTTTTAATCTGAGAGTCCAGGGTTCAAGTCCCTGTTC < 41bp 1 0.446531370928787 1 0.42462494969368 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918853 chr6:28918850 . . 0 18 hm5C_associated_SNPs_6636 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918854 + 28918834 28918874 41 AGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG AGACTTTTAATCTGAGAGTCCAGGGTTCAAGTCCCTGTTCG < 41bp 1 0.776530906627384 1 0.84857165813446 experiment 0.446938186745232 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918854 chr6:28918850 . . 0 17 hm5C_associated_SNPs_6637 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918867 + 28918847 28918887 41 GAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTG GAGAGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTG < 41bp 1 0.0835321250326398 1 0.0556141436100006 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918867 chr6:28918850 . . 0 4 hm5C_associated_SNPs_6638 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918850 28918850 1 + G A rs534455894 28918868 + 28918848 28918888 41 AGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTGG AGAGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTGG < 41bp 1 0.158727520796128 1 0.0420934557914734 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918868 chr6:28918850 . . 0 3 hm5C_associated_SNPs_6639 0 0 51 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28918798-28918850
64251 chr6 28918854 28918854 1 + C A rs115194890 28918837 + 28918817 28918857 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCAAGG < 41bp 1 0.033553714865453 1 0.0104500949382782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918837 chr6:28918854 . . 0 38 hm5C_associated_SNPs_6640 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28918854 28918854 1 + C A rs115194890 28918845 + 28918825 28918865 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT TAGAGCATCAGACTTTTAATCTGAGGGTCAAGGGTTCAAGT < 41bp 1 0.605488463229187 1 0.779318571090698 experiment 0.789023073541626 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918845 chr6:28918854 . . 0 30 hm5C_associated_SNPs_6641 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28918854 28918854 1 + C A rs115194890 28918853 + 28918833 28918873 41 CAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC CAGACTTTTAATCTGAGGGTCAAGGGTTCAAGTCCCTGTTC < 41bp 1 0.636654864844602 1 0.722925424575806 experiment 0.726690270310796 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918853 chr6:28918854 . . 0 22 hm5C_associated_SNPs_6642 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28918854 28918854 1 + C A rs115194890 28918867 + 28918847 28918887 41 GAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTG GAGGGTCAAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTG < 41bp 1 0.0969677155345137 1 0.0453467667102814 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918867 chr6:28918854 . . 0 8 hm5C_associated_SNPs_6643 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28918854 28918854 1 + C A rs115194890 28918868 + 28918848 28918888 41 AGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTGG AGGGTCAAGGGTTCAAGTCCCTGTTCGGGCGGGAGTGGTGG < 41bp 1 0.194281932741326 1 0.0255004465579987 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000204709;ENSG00000228666 intergenic Human other chr6:28918868 chr6:28918854 . . 0 7 hm5C_associated_SNPs_6644 0 0 52 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:28918800-28918880
64251 chr6 28950003 28950003 1 + G A rs555017830 28949987 + 28949967 28950007 41 ACTTCAGCTTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGC ACTTCAGCTTCCCTGGTGGTCTAGTGGTTAGGATTCAGCGC < 41bp 1 0.616480564636627 1 0.731004953384399 experiment 0.767038870726745 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28949987 chr6:28950003 . . 0 37 hm5C_associated_SNPs_6645 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950005 + 28949985 28950025 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCAGCGCTCTCACCGCCGCGGCCCG < 41bp 1 0.3536398509135 1 0.549915671348572 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950005 chr6:28950003 . . 0 19 hm5C_associated_SNPs_6646 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950007 + 28949987 28950027 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCAGCGCTCTCACCGCCGCGGCCCGGG < 41bp 1 0.10313844253739 1 0.0965283811092377 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950007 chr6:28950003 . . 0 17 hm5C_associated_SNPs_6647 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950009 + 28949989 28950029 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCAGCGCTCTCACCGCCGCGGCCCGGGTT < 41bp 1 0.295940591793183 1 0.085527628660202 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950009 chr6:28950003 . . 0 15 hm5C_associated_SNPs_6648 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950011 + 28949991 28950031 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCG < 41bp 1 0.679827262651793 1 0.312942922115326 experiment 0.640345474696414 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950011 chr6:28950003 . . 0 13 hm5C_associated_SNPs_6649 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950013 + 28949993 28950033 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCGAT < 41bp 1 0.391558192886766 1 0.409921765327454 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950013 chr6:28950003 . . 0 11 hm5C_associated_SNPs_6650 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950014 + 28949994 28950034 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCGATT < 41bp 1 0.574402806709271 1 0.882621228694916 experiment 0.851194386581459 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950014 chr6:28950003 . . 0 10 hm5C_associated_SNPs_6651 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950016 + 28949996 28950036 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC < 41bp 1 0.395021973946233 1 0.787165105342865 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950016 chr6:28950003 . . 0 8 hm5C_associated_SNPs_6652 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950017 + 28949997 28950037 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC < 41bp 1 0.741241102225792 1 0.906620025634766 experiment 0.517517795548417 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950017 chr6:28950003 . . 0 7 hm5C_associated_SNPs_6653 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950019 + 28949999 28950039 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCAGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG < 41bp 1 0.348044167367997 1 0.554947435855865 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950019 chr6:28950003 . . 0 5 hm5C_associated_SNPs_6654 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950022 + 28950002 28950042 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CAGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA < 41bp 1 0.612642513581669 1 0.239868372678757 experiment 0.774714972836662 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950022 chr6:28950003 . . 0 2 hm5C_associated_SNPs_6655 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950003 28950003 1 + G A rs555017830 28950023 + 28950003 28950043 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG AGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.690092294655685 1 0.302719175815582 experiment 0.619815410688631 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950023 chr6:28950003 . . 0 1 hm5C_associated_SNPs_6656 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950005 + 28949985 28950025 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCGGCGCTCTCAACGCCGCGGCCCG < 41bp 1 0.290637352158669 1 0.402442514896393 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950005 chr6:28950013 . . 0 29 hm5C_associated_SNPs_6657 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950007 + 28949987 28950027 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCGGCGCTCTCAACGCCGCGGCCCGGG < 41bp 1 0.0980379200945737 1 0.216034203767776 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950007 chr6:28950013 . . 0 27 hm5C_associated_SNPs_6658 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950009 + 28949989 28950029 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCGGCGCTCTCAACGCCGCGGCCCGGGTT < 41bp 1 0.7053682846534 1 0.819032669067383 experiment 0.5892634306932 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950009 chr6:28950013 . . 0 25 hm5C_associated_SNPs_6659 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950011 + 28949991 28950031 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCG < 41bp 1 0.716351890370108 1 0.795702934265137 experiment 0.567296219259784 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950011 chr6:28950013 . . 0 23 hm5C_associated_SNPs_6660 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950014 + 28949994 28950034 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCGATT < 41bp 1 0.630942973957036 1 0.852275609970093 experiment 0.738114052085928 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950014 chr6:28950013 . . 0 20 hm5C_associated_SNPs_6661 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950016 + 28949996 28950036 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCGATTCC < 41bp 1 0.519234808492548 1 0.770686745643616 experiment 0.961530383014903 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950016 chr6:28950013 . . 0 18 hm5C_associated_SNPs_6662 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950017 + 28949997 28950037 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCGATTCCC < 41bp 1 0.744141916291505 1 0.928006768226624 experiment 0.51171616741699 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950017 chr6:28950013 . . 0 17 hm5C_associated_SNPs_6663 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950019 + 28949999 28950039 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCAACGCCGCGGCCCGGGTTCGATTCCCGG < 41bp 1 0.344702604323549 1 0.422691702842712 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950019 chr6:28950013 . . 0 15 hm5C_associated_SNPs_6664 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950022 + 28950002 28950042 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCAACGCCGCGGCCCGGGTTCGATTCCCGGTCA < 41bp 1 0.607308060197017 1 0.190762162208557 experiment 0.785383879605966 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950022 chr6:28950013 . . 0 12 hm5C_associated_SNPs_6665 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950023 + 28950003 28950043 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCAACGCCGCGGCCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.708257093575631 1 0.335917353630066 experiment 0.583485812848737 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950023 chr6:28950013 . . 0 11 hm5C_associated_SNPs_6666 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950024 + 28950004 28950044 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCAACGCCGCGGCCCGGGTTCGATTCCCGGTCAGG < 41bp 1 0.481340258491684 1 0.432999670505524 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950024 chr6:28950013 . . 0 10 hm5C_associated_SNPs_6667 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950013 28950013 1 + C A rs57071012 28950030 + 28950010 28950050 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA TCAACGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA < 41bp 1 0.177208564886668 1 0.0701130032539368 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950030 chr6:28950013 . . 0 4 hm5C_associated_SNPs_6668 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950005 + 28949985 28950025 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCGGCGCTCTCACAGCCGCGGCCCG < 41bp 1 0.277599175366575 1 0.360921710729599 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950005 chr6:28950014 . . 0 30 hm5C_associated_SNPs_6669 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950007 + 28949987 28950027 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCGGCGCTCTCACAGCCGCGGCCCGGG < 41bp 1 0.0857799488941064 1 0.12676990032196 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950007 chr6:28950014 . . 0 28 hm5C_associated_SNPs_6670 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950009 + 28949989 28950029 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCGGCGCTCTCACAGCCGCGGCCCGGGTT < 41bp 1 0.333733135192175 1 0.265030324459076 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950009 chr6:28950014 . . 0 26 hm5C_associated_SNPs_6671 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950011 + 28949991 28950031 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCG < 41bp 1 0.715221487897018 1 0.606780469417572 experiment 0.569557024205964 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950011 chr6:28950014 . . 0 24 hm5C_associated_SNPs_6672 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950013 + 28949993 28950033 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCGAT < 41bp 1 0.674346872157821 1 0.770263075828552 experiment 0.651306255684359 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950013 chr6:28950014 . . 0 22 hm5C_associated_SNPs_6673 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950016 + 28949996 28950036 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCGATTCC < 41bp 1 0.447677942723986 1 0.754593849182129 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950016 chr6:28950014 . . 0 19 hm5C_associated_SNPs_6674 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950017 + 28949997 28950037 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCGATTCCC < 41bp 1 0.773276365047723 1 0.785526275634766 experiment 0.453447269904555 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950017 chr6:28950014 . . 0 18 hm5C_associated_SNPs_6675 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950019 + 28949999 28950039 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCACAGCCGCGGCCCGGGTTCGATTCCCGG < 41bp 1 0.380117182002046 1 0.256746232509613 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950019 chr6:28950014 . . 0 16 hm5C_associated_SNPs_6676 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950022 + 28950002 28950042 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCACAGCCGCGGCCCGGGTTCGATTCCCGGTCA < 41bp 1 0.59485558970835 1 0.41501396894455 experiment 0.810288820583299 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950022 chr6:28950014 . . 0 13 hm5C_associated_SNPs_6677 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950023 + 28950003 28950043 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCACAGCCGCGGCCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.676305341662396 1 0.401311904191971 experiment 0.647389316675207 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950023 chr6:28950014 . . 0 12 hm5C_associated_SNPs_6678 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950024 + 28950004 28950044 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCACAGCCGCGGCCCGGGTTCGATTCCCGGTCAGG < 41bp 1 0.506696265395926 1 0.586596369743347 experiment 0.986607469208148 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950024 chr6:28950014 . . 0 11 hm5C_associated_SNPs_6679 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950014 28950014 1 + C A rs546018964 28950030 + 28950010 28950050 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA TCACAGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA < 41bp 1 0.196283563427128 1 0.102809190750122 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950030 chr6:28950014 . . 0 5 hm5C_associated_SNPs_6680 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950005 + 28949985 28950025 41 GTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCG GTCTAGTGGTTAGGATTCGGCGCTCTCACCGACGCGGCCCG < 41bp 1 0.290457880084075 1 0.561325788497925 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950005 chr6:28950016 . . 0 32 hm5C_associated_SNPs_6681 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950007 + 28949987 28950027 41 CTAGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGG CTAGTGGTTAGGATTCGGCGCTCTCACCGACGCGGCCCGGG < 41bp 1 0.0816194029173793 1 0.0836676955223083 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950007 chr6:28950016 . . 0 30 hm5C_associated_SNPs_6682 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950009 + 28949989 28950029 41 AGTGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTT AGTGGTTAGGATTCGGCGCTCTCACCGACGCGGCCCGGGTT < 41bp 1 0.306652825145781 1 0.1136434674263 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950009 chr6:28950016 . . 0 28 hm5C_associated_SNPs_6683 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950011 + 28949991 28950031 41 TGGTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCG TGGTTAGGATTCGGCGCTCTCACCGACGCGGCCCGGGTTCG < 41bp 1 0.77667825865276 1 0.76165759563446 experiment 0.446643482694481 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950011 chr6:28950016 . . 0 26 hm5C_associated_SNPs_6684 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950013 + 28949993 28950033 41 GTTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGAT GTTAGGATTCGGCGCTCTCACCGACGCGGCCCGGGTTCGAT < 41bp 1 0.368565114015013 1 0.635092258453369 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950013 chr6:28950016 . . 0 24 hm5C_associated_SNPs_6685 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950014 + 28949994 28950034 41 TTAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATT TTAGGATTCGGCGCTCTCACCGACGCGGCCCGGGTTCGATT < 41bp 1 0.584983069500597 1 0.82353401184082 experiment 0.830033860998806 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950014 chr6:28950016 . . 0 23 hm5C_associated_SNPs_6686 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950017 + 28949997 28950037 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCACCGACGCGGCCCGGGTTCGATTCCC < 41bp 1 0.716101773207155 1 0.866880059242249 experiment 0.56779645358569 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950017 chr6:28950016 . . 0 20 hm5C_associated_SNPs_6687 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950019 + 28949999 28950039 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCACCGACGCGGCCCGGGTTCGATTCCCGG < 41bp 1 0.438988096032184 1 0.22836846113205 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950019 chr6:28950016 . . 0 18 hm5C_associated_SNPs_6688 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950022 + 28950002 28950042 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCACCGACGCGGCCCGGGTTCGATTCCCGGTCA < 41bp 1 0.623154816517022 1 0.0890198349952698 experiment 0.753690366965956 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950022 chr6:28950016 . . 0 15 hm5C_associated_SNPs_6689 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950023 + 28950003 28950043 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCACCGACGCGGCCCGGGTTCGATTCCCGGTCAG < 41bp 1 0.681822225172135 1 0.255304336547852 experiment 0.636355549655731 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950023 chr6:28950016 . . 0 14 hm5C_associated_SNPs_6690 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950024 + 28950004 28950044 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCACCGACGCGGCCCGGGTTCGATTCCCGGTCAGG < 41bp 1 0.459518266383712 1 0.138830423355103 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950024 chr6:28950016 . . 0 13 hm5C_associated_SNPs_6691 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950030 + 28950010 28950050 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA TCACCGACGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA < 41bp 1 0.224346031727506 1 0.0619461536407471 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950030 chr6:28950016 . . 0 7 hm5C_associated_SNPs_6692 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950035 + 28950015 28950055 41 GCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTT GACGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTT < 41bp 1 0.55290808515384 1 0.475483953952789 experiment 0.89418382969232 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950035 chr6:28950016 . . 0 2 hm5C_associated_SNPs_6693 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950016 28950016 1 + C A rs192373984 28950036 + 28950016 28950056 41 CCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTTT ACGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTTT < 41bp 1 0.480304116271211 1 0.334665715694427 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950036 chr6:28950016 . . 0 1 hm5C_associated_SNPs_6694 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:28949997-28950048
64251 chr6 28950035 28950035 1 + C A rs184275668 28950016 + 28949996 28950036 41 AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCC AGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTAC < 41bp 1 0.432387303044083 1 0.790496110916138 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950016 chr6:28950035 . . 0 40 hm5C_associated_SNPs_6695 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950017 + 28949997 28950037 41 GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCC GGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTACC < 41bp 1 0.649087923734934 1 0.900254130363464 experiment 0.701824152530131 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950017 chr6:28950035 . . 0 39 hm5C_associated_SNPs_6696 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950019 + 28949999 28950039 41 ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGG ATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTACCGG < 41bp 1 0.339086568884958 1 0.474226295948029 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950019 chr6:28950035 . . 0 37 hm5C_associated_SNPs_6697 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950022 + 28950002 28950042 41 CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCA CGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTACCGGTCA < 41bp 1 0.591352599906693 1 0.31808739900589 experiment 0.817294800186614 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950022 chr6:28950035 . . 0 34 hm5C_associated_SNPs_6698 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950023 + 28950003 28950043 41 GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAG GGCGCTCTCACCGCCGCGGCCCGGGTTCGATTACCGGTCAG < 41bp 1 0.697349658749163 1 0.235447019338608 experiment 0.605300682501673 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950023 chr6:28950035 . . 0 33 hm5C_associated_SNPs_6699 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950024 + 28950004 28950044 41 GCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGG GCGCTCTCACCGCCGCGGCCCGGGTTCGATTACCGGTCAGG < 41bp 1 0.503400754897871 1 0.573260009288788 experiment 0.993198490204259 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950024 chr6:28950035 . . 0 32 hm5C_associated_SNPs_6700 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950030 + 28950010 28950050 41 TCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGA TCACCGCCGCGGCCCGGGTTCGATTACCGGTCAGGGAATGA < 41bp 1 0.206906193962308 1 0.0828644037246704 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950030 chr6:28950035 . . 0 26 hm5C_associated_SNPs_6701 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950036 + 28950016 28950056 41 CCGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTTT CCGCGGCCCGGGTTCGATTACCGGTCAGGGAATGAGGTTTT < 41bp 1 0.476659347641573 1 0.347591817378998 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950036 chr6:28950035 . . 0 20 hm5C_associated_SNPs_6702 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950037 + 28950017 28950057 41 CGCGGCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTTTT CGCGGCCCGGGTTCGATTACCGGTCAGGGAATGAGGTTTTT < 41bp 1 0.274117231126261 1 0.0816690325737 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950037 chr6:28950035 . . 0 19 hm5C_associated_SNPs_6703 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28950035 28950035 1 + C A rs184275668 28950041 + 28950021 28950061 41 GCCCGGGTTCGATTCCCGGTCAGGGAATGAGGTTTTTCTGT GCCCGGGTTCGATTACCGGTCAGGGAATGAGGTTTTTCTGT < 41bp 1 0.739052634163283 1 0.912857592105865 experiment 0.521894731673433 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC01556;HCG15 ENSG00000263426;ENSG00000227214 intergenic Human other chr6:28950041 chr6:28950035 . . 0 15 hm5C_associated_SNPs_6704 0 0 51 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:28950035-28950056
64251 chr6 28956824 28956824 1 + C A rs149603692 28956826 + 28956806 28956846 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCAAA CTGGATTAAGGCTCCAGTATCTTCGGGGGCGTGGGTTCAAA < 41bp 1 0.492964427306985 1 0.196686863899231 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG15 ENSG00000244349 downstream Human antisense chr6:28956826 chr6:28956824 . . 0 19 hm5C_associated_SNPs_6705 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 28956824 28956824 1 + C A rs149603692 28956835 + 28956815 28956855 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCAAATCCCACCGC GGCTCCAGTATCTTCGGGGGCGTGGGTTCAAATCCCACCGC < 41bp 1 0.762267052438173 1 0.422429651021957 experiment 0.475465895123655 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG15 ENSG00000244349 downstream Human antisense chr6:28956835 chr6:28956824 . . 0 10 hm5C_associated_SNPs_6706 0 0 13 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 28956834 28956834 1 + G A rs192922824 28956826 + 28956806 28956846 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCAAA CTGGATTAAGGCTCCAGTCTCTTCGGGGACGTGGGTTCAAA < 41bp 1 0.435816863393753 1 0.218551009893417 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HCG15 ENSG00000244349 downstream Human antisense chr6:28956826 chr6:28956834 . . 0 29 hm5C_associated_SNPs_6707 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 28956834 28956834 1 + G A rs192922824 28956835 + 28956815 28956855 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCAAATCCCACCGC GGCTCCAGTCTCTTCGGGGACGTGGGTTCAAATCCCACCGC < 41bp 1 0.792206009200164 1 0.449799120426178 experiment 0.415587981599672 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG15 ENSG00000244349 downstream Human antisense chr6:28956835 chr6:28956834 . . 0 20 hm5C_associated_SNPs_6708 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 28956834 28956834 1 + G A rs192922824 28956852 + 28956832 28956872 41 GGGCGTGGGTTCAAATCCCACCGCTGCCAAGTACTTTTCAT GGACGTGGGTTCAAATCCCACCGCTGCCAAGTACTTTTCAT < 41bp 1 0.207282993773978 1 0.0604961812496185 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG15 ENSG00000244349 downstream Human antisense chr6:28956852 chr6:28956834 . . 0 3 hm5C_associated_SNPs_6709 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 28956859 28956859 1 + C T rs555283073 28956852 + 28956832 28956872 41 GGGCGTGGGTTCAAATCCCACCGCTGCCAAGTACTTTTCAT GGGCGTGGGTTCAAATCCCACCGCTGCTAAGTACTTTTCAT < 41bp 1 0.19259339669284 1 0.0853090286254883 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HCG15 ENSG00000244349 downstream Human antisense chr6:28956852 chr6:28956859 . . 0 28 hm5C_associated_SNPs_6710 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr6:28956810-28956869
64251 chr6 29693233 29693233 1 + C T rs57237143 29693226 + 29693206 29693246 41 CTTCCCTTCCTTTCCCAGAGCAGTCTCCCCAGCCCACCATC CTTCCCTTCCTTTCCCAGAGCAGTCTCTCCAGCCCACCATC < 41bp 1 0.204146981914463 1 0.121273249387741 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HLA-F ENSG00000204642 CDS Human protein_coding chr6:29693226 chr6:29693233 nonsynonymous SNV 0.013 1 28 hm5C_associated_SNPs_6711 0 0 2 RPS3 POSTAR2 ENCODE chr6:29693229-29693265
64251 chr6 29910557 29910557 1 + T A rs1136659 29910541 + 29910521 29910561 41 TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCTTCAC TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCATCAC < 41bp 1 0.682593175440258 1 0.98685896396637 experiment 0.634813649119484 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910541 chr6:29910557 nonsynonymous SNV 0.000 1 37 hm5C_associated_SNPs_6720 0 0 17 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:29910540-29910560
64251 chr6 29910558 29910558 1 + T A rs2075684 29910541 + 29910521 29910561 41 TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCTTCAC TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCTACAC < 41bp 1 0.686272790167758 1 0.981662094593048 experiment 0.627454419664484 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910541 chr6:29910558 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_6721 0 0 18 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:29910540-29910560
64251 chr6 29910586 29910586 1 + G A rs12721672 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGAGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC < 41bp 1 0.636675171065304 1 0.704601407051086 experiment 0.726649657869393 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910586 synonymous SNV . 0 3 hm5C_associated_SNPs_6722 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:29910540-29910600
64251 chr6 29910587 29910587 1 + G A rs41549014 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGAAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC < 41bp 1 0.630638153918094 1 0.739784061908722 experiment 0.738723692163812 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910587 nonsynonymous SNV 0.001 3 4 hm5C_associated_SNPs_6723 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:29910540-29910600
64251 chr6 29910623 29910623 1 + A T rs1059438 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACTC < 41bp 1 0.648670197348618 1 0.781319856643677 experiment 0.702659605302764 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910623 nonsynonymous SNV 0.849 1 40 hm5C_associated_SNPs_6724 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:29910620-29910640
64251 chr6 29911256 29911256 1 + T A rs1059542 29911265 + 29911245 29911285 41 GCCTACCTGGATGGCACGTGCGTGGAGTGGCTCCGCAGATA GCCTACCTGGAAGGCACGTGCGTGGAGTGGCTCCGCAGATA < 41bp 1 0.585054444615514 1 0.4251349568367 experiment 0.829891110768972 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911265 chr6:29911256 nonsynonymous SNV 0.005 0 12 hm5C_associated_SNPs_6725 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:29911240-29911260
64251 chr6 29911260 29911260 1 + A C rs543623321 29911265 + 29911245 29911285 41 GCCTACCTGGATGGCACGTGCGTGGAGTGGCTCCGCAGATA GCCTACCTGGATGGCCCGTGCGTGGAGTGGCTCCGCAGATA < 41bp 1 0.585830330319252 1 0.461565613746643 experiment 0.828339339361497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911265 chr6:29911260 nonsynonymous SNV 0.000 0 16 hm5C_associated_SNPs_6726 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:29911240-29911260
64251 chr6 29911260 29911260 1 + A C rs543623321 29911277 + 29911257 29911297 41 GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG GGCCCGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG < 41bp 1 0.591449294038074 1 0.180871844291687 experiment 0.817101411923853 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911277 chr6:29911260 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_6727 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:29911240-29911260
64251 chr6 29911260 29911260 1 + A C rs543623321 29911278 + 29911258 29911298 41 GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGG GCCCGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGG < 41bp 1 0.46316561906773 1 0.515647530555725 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911278 chr6:29911260 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_6728 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:29911240-29911260
64251 chr6 29911284 29911284 1 + T C rs41563116 29911265 + 29911245 29911285 41 GCCTACCTGGATGGCACGTGCGTGGAGTGGCTCCGCAGATA GCCTACCTGGATGGCACGTGCGTGGAGTGGCTCCGCAGACA < 41bp 1 0.574719552906971 1 0.322111189365387 experiment 0.850560894186059 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911265 chr6:29911284 nonsynonymous SNV 0.002 2 40 hm5C_associated_SNPs_6735 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:29911284-29911285
64251 chr6 29911284 29911284 1 + T C rs41563116 29911277 + 29911257 29911297 41 GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG GGCACGTGCGTGGAGTGGCTCCGCAGACACCTGGAGAACGG < 41bp 1 0.58430648513266 1 0.245710849761963 experiment 0.83138702973468 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911277 chr6:29911284 nonsynonymous SNV 0.002 2 28 hm5C_associated_SNPs_6736 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:29911284-29911285
64251 chr6 29911284 29911284 1 + T C rs41563116 29911278 + 29911258 29911298 41 GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGG GCACGTGCGTGGAGTGGCTCCGCAGACACCTGGAGAACGGG < 41bp 1 0.389149413702261 1 0.641611278057098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911278 chr6:29911284 nonsynonymous SNV 0.002 2 27 hm5C_associated_SNPs_6737 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:29911284-29911285
64251 chr6 29913365 29913365 1 + G A rs181754482 29913374 + 29913354 29913394 41 AATGTGAGGAGGTGGGGAGACCACCCCACCCCCATGTCCAC AATGTGAGGAGATGGGGAGACCACCCCACCCCCATGTCCAC < 41bp 1 0.359444040827309 1 0.264895021915436 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913374 chr6:29913365 . . 0 12 hm5C_associated_SNPs_6740 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:29913243-29913373
64251 chr6 29913367 29913367 1 + G A rs113042145 29913374 + 29913354 29913394 41 AATGTGAGGAGGTGGGGAGACCACCCCACCCCCATGTCCAC AATGTGAGGAGGTAGGGAGACCACCCCACCCCCATGTCCAC < 41bp 1 0.353826238557524 1 0.14007505774498 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913374 chr6:29913367 . . 0 14 hm5C_associated_SNPs_6741 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:29913243-29913373
64251 chr6 29913386 29913386 1 + C G rs41545022 29913374 + 29913354 29913394 41 AATGTGAGGAGGTGGGGAGACCACCCCACCCCCATGTCCAC AATGTGAGGAGGTGGGGAGACCACCCCACCCCGATGTCCAC < 41bp 1 0.374374279637137 1 0.211485713720322 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913374 chr6:29913386 . . 0 33 hm5C_associated_SNPs_6742 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:29913372-29913400
64251 chr6 29913483 29913483 1 + T C rs79244404 29913472 + 29913452 29913492 41 GAGAGGTGGGGCTGAGGTGTCTCCATCTCTGTCTCAACTTC GAGAGGTGGGGCTGAGGTGTCTCCATCTCTGCCTCAACTTC < 41bp 1 0.708273319471417 1 0.749915957450867 experiment 0.583453361057165 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control HLA-A ENSG00000206503 UTR3 Human protein_coding chr6:29913472 chr6:29913483 . . 0 32 hm5C_associated_SNPs_6743 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:29913480-29913500
64251 chr6 30312945 30312945 1 + G A rs371403510 30312944 + 30312924 30312964 41 CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGA CGGGAGGCCCTGGAGCGCGGCAGTGATGGCGGGGCCGGTGA < 41bp 1 0.49803942007219 1 0.188311874866486 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPP21 ENSG00000241370 UTR5 Human protein_coding chr6:30312944 chr6:30312945 . . 0 22 hm5C_associated_SNPs_6746 0 0 2 DDX3X POSTAR2 ENCODE chr6:30312944-30312989
64251 chr6 30312958 30312958 1 + C T rs199499005 30312944 + 30312924 30312964 41 CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGA CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGTCGGTGA < 41bp 1 0.532406958541922 1 0.419242382049561 experiment 0.935186082916156 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPP21 ENSG00000241370 CDS Human protein_coding chr6:30312944 chr6:30312958 nonsynonymous SNV 0.879 0 35 hm5C_associated_SNPs_6747 0 0 3 DDX3X POSTAR2 ENCODE chr6:30312944-30312989
64251 chr6 30312962 30312962 1 + T G rs201417696 30312944 + 30312924 30312964 41 CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGA CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGGGA < 41bp 1 0.538166512958456 1 0.471979886293411 experiment 0.923666974083088 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPP21 ENSG00000241370 CDS Human protein_coding chr6:30312944 chr6:30312962 nonsynonymous SNV 0.962 4 39 hm5C_associated_SNPs_6748 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:30312960-30312980
64251 chr6 30545627 30545627 1 + G A rs547655254 30545611 + 30545591 30545631 41 ATAGTTCTTTGAAGAGCTGGCAGTAGAAGATAAACAGGCTG ATAGTTCTTTGAAGAGCTGGCAGTAGAAGATAAACAAGCTG < 41bp 1 0.271920585774052 1 0.318334102630615 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30545611 chr6:30545627 synonymous SNV . 0 37 hm5C_associated_SNPs_6749 0 0 25 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:30545600-30545637
64251 chr6 30545879 30545879 1 + A G rs113473909 30545872 + 30545852 30545892 41 GCAAAAAAAAAAGCGAGATACCCGAAAAGGCAGGCGGAAGA GCAAAAAAAAAAGCGAGATACCCGAAAGGGCAGGCGGAAGA < 41bp 1 0.469541288668334 1 0.401990920305252 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30545872 chr6:30545879 synonymous SNV . 0 28 hm5C_associated_SNPs_6750 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:30545860-30545880
64251 chr6 30545879 30545879 1 + A G rs113473909 30545886 + 30545866 30545906 41 GAGATACCCGAAAAGGCAGGCGGAAGAAGGATGTGGATGAT GAGATACCCGAAAGGGCAGGCGGAAGAAGGATGTGGATGAT < 41bp 1 0.552008577766439 1 0.855071604251862 experiment 0.895982844467122 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30545886 chr6:30545879 synonymous SNV . 0 14 hm5C_associated_SNPs_6751 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:30545860-30545880
64251 chr6 30552187 30552187 1 + C G rs372113020 30552191 + 30552171 30552211 41 GTGTCCTCTTCTCCCTCCTCCCAGGTGTATGAGGAATTGCG GTGTCCTCTTCTCCCTGCTCCCAGGTGTATGAGGAATTGCG < 41bp 1 0.0941492108915935 1 0.0915393531322479 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MIR877 ENSG00000216101 ncRNA_exonic Human miRNA chr6:30552191 chr6:30552187 . . 0 17 hm5C_associated_SNPs_6752 0 0 11 BUD13 POSTAR2 ENCODE chr6:30552149-30552189
64251 chr6 30552187 30552187 1 + C G rs372113020 30552192 + 30552172 30552212 41 TGTCCTCTTCTCCCTCCTCCCAGGTGTATGAGGAATTGCGG TGTCCTCTTCTCCCTGCTCCCAGGTGTATGAGGAATTGCGG < 41bp 1 0.471548285406505 1 0.537522256374359 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MIR877 ENSG00000216101 ncRNA_exonic Human miRNA chr6:30552192 chr6:30552187 . . 0 16 hm5C_associated_SNPs_6753 0 0 11 BUD13 POSTAR2 ENCODE chr6:30552149-30552189
64251 chr6 30593485 30593485 1 + C G rs34315095 30593484 + 30593464 30593504 41 CATCTCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCC CATCTCCAAGAAGAGAGTGGCGCCCCACCTGAGTCAATGCC < 41bp 1 0.283442817750773 1 0.35805344581604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593484 chr6:30593485 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_6754 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30593440-30593500
64251 chr6 30689665 30689665 1 + G A rs187119487 30689671 + 30689651 30689691 41 TTAAAATGGGAGATGTGGGGCCGAGGTGGGCGAATTGGGAT TTAAAATGGGAGATATGGGGCCGAGGTGGGCGAATTGGGAT < 41bp 1 0.275960128265109 1 0.444751381874084 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TUBB ENSG00000196230 UTR5 Human protein_coding chr6:30689671 chr6:30689665 . . 0 15 hm5C_associated_SNPs_6756 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:30689649-30689675
64251 chr6 30689665 30689665 1 + G A rs187119487 30689672 + 30689652 30689692 41 TAAAATGGGAGATGTGGGGCCGAGGTGGGCGAATTGGGATC TAAAATGGGAGATATGGGGCCGAGGTGGGCGAATTGGGATC < 41bp 1 0.511225473577626 1 0.767280876636505 experiment 0.977549052844748 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TUBB ENSG00000196230 UTR5 Human protein_coding chr6:30689672 chr6:30689665 . . 0 14 hm5C_associated_SNPs_6757 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:30689649-30689675
64251 chr6 30857003 30857003 1 + G A rs146275209 30857005 + 30856985 30857025 41 GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG GAGCAGTGACGGGGATGGAGCCTGGTGCCCCGCAGGGTCGG < 41bp 1 0.347053305067927 1 0.421445935964584 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30857005 chr6:30857003 synonymous SNV . 0 19 hm5C_associated_SNPs_6758 0 0 3 BUD13 POSTAR2 ENCODE chr6:30856999-30857068
64251 chr6 30887988 30887988 1 + C T rs2249459 30887972 + 30887952 30887992 41 GAGGATGGGACCATGACCTCCCTCTGCGGGGACTGGCTGCA GAGGATGGGACCATGACCTCCCTCTGCGGGGACTGGTTGCA < 41bp 1 0.101983021231408 1 0.286471366882324 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30887972 chr6:30887988 synonymous SNV . 0 37 hm5C_associated_SNPs_6759 1 0 3 BUD13 POSTAR2 ENCODE chr6:30887980-30887990
64251 chr6 31126409 31126409 1 + G T rs17197101 31126398 + 31126378 31126418 41 TCTTGGCTGTCAAACAGATGCAGCAACGTCGGCTCCTGCCG TCTTGGCTGTCAAACAGATGCAGCAACGTCGTCTCCTGCCG < 41bp 1 0.664942496720064 1 0.347355872392654 experiment 0.670115006559871 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TCF19 ENSG00000137310 UTR5 Human protein_coding chr6:31126398 chr6:31126409 . . 0 32 hm5C_associated_SNPs_6760 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:31126400-31126420
64251 chr6 31131060 31131060 1 + C T rs139130055 31131055 + 31131035 31131075 41 TCTTGTGGGTCTGTGATATTCCTTGCTTTCCAGGGAGAATG TCTTGTGGGTCTGTGATATTCCTTGTTTTCCAGGGAGAATG < 41bp 1 0.0421290210198415 1 0.0206445455551147 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TCF19 ENSG00000137310 UTR3 Human protein_coding chr6:31131055 chr6:31131060 . . 0 26 hm5C_associated_SNPs_6761 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31131024-31131062
64251 chr6 31378425 31378425 1 + A C rs1051786 31378418 + 31378398 31378438 41 ATCTGGATGGTCAGCCCTTCCTGCGCTATGACAGGCAGAAA ATCTGGATGGTCAGCCCTTCCTGCGCTCTGACAGGCAGAAA < 41bp 1 0.660093380375821 1 0.22171938419342 experiment 0.679813239248357 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MICA ENSG00000204520 CDS Human protein_coding chr6:31378418 chr6:31378425 nonsynonymous SNV 0.000 1 28 hm5C_associated_SNPs_6762 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:31378424-31378425
64251 chr6 31378864 31378864 1 + A G rs41558312 31378860 + 31378840 31378880 41 TGGGGGCAGGCTTGCATTCCCTCCAGGAGATTAGGGTCTGT TGGGGGCAGGCTTGCATTCCCTCCGGGAGATTAGGGTCTGT < 41bp 1 0.734186361614095 1 0.476136118173599 experiment 0.531627276771811 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MICA ENSG00000204520 CDS Human protein_coding chr6:31378860 chr6:31378864 nonsynonymous SNV 0.032 1 25 hm5C_associated_SNPs_6763 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:31378863-31378898
64251 chr6 31590898 31590898 1 + C T rs2736172 31590883 + 31590863 31590903 41 ACAAAGGCGTGTCTGTGGTTCCCTGTCTTTGGACACGTAAG ACAAAGGCGTGTCTGTGGTTCCCTGTCTTTGGACATGTAAG < 41bp 1 0.0447494573760968 1 0.0320070385932922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA38 ENSG00000200816 ncRNA_exonic Human snoRNA chr6:31590883 chr6:31590898 . . 0 36 hm5C_associated_SNPs_6764 0 1 30 FBL POSTAR2 GSE43666,GSM1067865 chr6:31590840-31590920
64251 chr6 31590898 31590898 1 + C T rs2736172 31590889 + 31590869 31590909 41 GCGTGTCTGTGGTTCCCTGTCTTTGGACACGTAAGAATTGG GCGTGTCTGTGGTTCCCTGTCTTTGGACATGTAAGAATTGG < 41bp 1 0.074606539231422 1 0.174413025379181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA38 ENSG00000200816 ncRNA_exonic Human snoRNA chr6:31590889 chr6:31590898 . . 0 30 hm5C_associated_SNPs_6765 0 1 30 FBL POSTAR2 GSE43666,GSM1067865 chr6:31590840-31590920
64251 chr6 31593369 31593369 1 + G A rs114452424 31593350 + 31593330 31593370 41 GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCAC < 41bp 1 0.566185942779908 1 0.336709380149841 experiment 0.867628114440183 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593350 chr6:31593369 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_6766 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593369 31593369 1 + G A rs114452424 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCACG < 41bp 1 0.36544533776436 1 0.109040707349777 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593369 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_6767 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593369 31593369 1 + G A rs114452424 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCACGG < 41bp 1 0.355539559469808 1 0.118464022874832 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593369 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_6768 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593369 31593369 1 + G A rs114452424 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCACGGA < 41bp 1 0.288302461282662 1 0.393140733242035 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593369 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_6769 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593369 31593369 1 + G A rs114452424 31593388 + 31593368 31593408 41 CGCGGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC CACGGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC < 41bp 1 0.645230880408024 1 0.700056076049805 experiment 0.709538239183951 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593388 chr6:31593369 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_6770 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31595926 31595926 1 + C A rs45544132 31595942 + 31595922 31595962 41 TACTCCTACTCCAGGTGTGGCTGCGGCTCCCACTCTGGTGA TACTACTACTCCAGGTGTGGCTGCGGCTCCCACTCTGGTGA < 41bp 1 0.593479459865421 1 0.189402759075165 experiment 0.813041080269158 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31595942 chr6:31595926 nonsynonymous SNV 0.145 2 5 hm5C_associated_SNPs_6771 0 0 33 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31595880-31595940
64251 chr6 31599594 31599594 1 + A G rs10947220 31599589 + 31599569 31599609 41 GGACCTATGGGGGACGAGGGCGGGGAGCCCGAAGCCGGGAA GGACCTATGGGGGACGAGGGCGGGGGGCCCGAAGCCGGGAA < 41bp 1 0.727491162104958 1 0.938168048858643 experiment 0.545017675790084 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599589 chr6:31599594 synonymous SNV . 0 26 hm5C_associated_SNPs_6772 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:31599541-31599599
64251 chr6 31599980 31599980 1 + C T rs201846219 31599963 + 31599943 31599983 41 GGGGTGCCATCTCGCCGGGGCCGAGGAGGAGGGAGGCCCCC GGGGTGCCATCTCGCCGGGGCCGAGGAGGAGGGAGGCTCCC < 41bp 1 0.387924205560503 1 0.564118623733521 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599963 chr6:31599980 nonsynonymous SNV 0.969 2 38 hm5C_associated_SNPs_6773 0 0 16 RBM15 POSTAR2 GSE78030,GSM2064710 chr6:31599960-31600000
64251 chr6 31602074 31602074 1 + C G rs144034863 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCGTCAG < 41bp 1 0.487560972242175 1 0.271087348461151 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602074 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_6774 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCGTCAGG < 41bp 1 0.502746048765683 1 0.749370098114014 experiment 0.994507902468634 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602074 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_6775 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602066 + 31602046 31602086 41 TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTC TTGGGCTCTAAGCCTGAGGGCCCAGGCCGTCAGGCAGAGTC < 41bp 1 0.260223299812578 1 0.354826688766479 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602066 chr6:31602074 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_6776 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCAGGCCGTCAGGCAGAGTCCAGAGA < 41bp 1 0.186705528870094 1 0.0706175863742828 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602074 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_6777 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCAGGCCGTCAGGCAGAGTCCAGAGAT < 41bp 1 0.469138554883354 1 0.22318822145462 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602074 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_6778 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCAGGCCGTCAGGCAGAGTCCAGAGATACA < 41bp 1 0.409082310227153 1 0.772096991539001 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602074 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_6779 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602074 31602074 1 + C G rs144034863 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCGTCAGGCAGAGTCCAGAGATACAGGCA < 41bp 1 0.425746639225377 1 0.774823069572449 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602074 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_6780 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCGG < 41bp 1 0.503680517065197 1 0.419857740402222 experiment 0.992638965869605 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602077 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_6781 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCGGG < 41bp 1 0.533494671061731 1 0.875336587429047 experiment 0.933010657876538 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602077 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_6782 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602066 + 31602046 31602086 41 TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTC TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCGGGCAGAGTC < 41bp 1 0.247144381946531 1 0.338803112506866 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602066 chr6:31602077 nonsynonymous SNV 1.000 0 32 hm5C_associated_SNPs_6783 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCAGGCCCTCGGGCAGAGTCCAGAGA < 41bp 1 0.181829434868169 1 0.107433527708054 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602077 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_6784 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCAGGCCCTCGGGCAGAGTCCAGAGAT < 41bp 1 0.255720665207578 1 0.17361968755722 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602077 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_6785 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCAGGCCCTCGGGCAGAGTCCAGAGATA < 41bp 1 0.500283979152215 1 0.668254315853119 experiment 0.999432041695571 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602077 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_6786 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCAGGCCCTCGGGCAGAGTCCAGAGATACA < 41bp 1 0.47147156591656 1 0.865618705749512 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602077 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_6787 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602077 31602077 1 + A G rs560980870 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCCTCGGGCAGAGTCCAGAGATACAGGCA < 41bp 1 0.362197380869522 1 0.585389614105225 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602077 nonsynonymous SNV 1.000 0 18 hm5C_associated_SNPs_6788 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31604591 31604591 1 + C T rs10885 31604592 + 31604572 31604612 41 ACCACCTCCTGCCCCACCTCCCCTTTCTCTGTTACCTGTGG ACCACCTCCTGCCCCACCTTCCCTTTCTCTGTTACCTGTGG < 41bp 1 0.199365589617831 1 0.138335734605789 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604592 chr6:31604591 nonsynonymous SNV 0.983 3 20 hm5C_associated_SNPs_6789 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31604560-31604620
64251 chr6 31604591 31604591 1 + C T rs10885 31604607 + 31604587 31604627 41 ACCTCCCCTTTCTCTGTTACCTGTGGGCCCTGCTCTGCAGC ACCTTCCCTTTCTCTGTTACCTGTGGGCCCTGCTCTGCAGC < 41bp 1 0.635752429638931 1 0.22372442483902 experiment 0.728495140722139 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604607 chr6:31604591 nonsynonymous SNV 0.983 3 5 hm5C_associated_SNPs_6790 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31604560-31604620
64251 chr6 31605016 31605016 1 + T C rs35595439 31605013 + 31604993 31605033 41 ACGCCCTTCTTCCCTTAGGTCCTTCTCTGGCCTCAATTCCC ACGCCCTTCTTCCCTTAGGTCCTCCTCTGGCCTCAATTCCC < 41bp 1 0.12812369491945 1 0.0689878463745117 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31605013 chr6:31605016 nonsynonymous SNV 0.984 2 24 hm5C_associated_SNPs_6791 0 0 9 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31604980-31605040
64251 chr6 31633895 31633895 1 + C T rs568868694 31633885 + 31633865 31633905 41 CTCCCCCCACCCCACTTCGCCTGCCGCGGTCGGGTCCGCGG CTCCCCCCACCCCACTTCGCCTGCCGCGGTTGGGTCCGCGG < 41bp 1 0.407285103501654 1 0.116781622171402 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CSNK2B;GPANK1 ENSG00000204435;ENSG00000204438;ENSG00000263020 UTR5 Human other chr6:31633885 chr6:31633895 . . 0 31 hm5C_associated_SNPs_6792 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:31633856-31633914
64251 chr6 31633895 31633895 1 + C T rs568868694 31633891 + 31633871 31633911 41 CCACCCCACTTCGCCTGCCGCGGTCGGGTCCGCGGCCTGCG CCACCCCACTTCGCCTGCCGCGGTTGGGTCCGCGGCCTGCG < 41bp 1 0.484241902355127 1 0.220014065504074 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CSNK2B;GPANK1 ENSG00000204435;ENSG00000204438;ENSG00000263020 UTR5 Human other chr6:31633891 chr6:31633895 . . 0 25 hm5C_associated_SNPs_6793 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:31633856-31633914
64251 chr6 31637190 31637190 1 + G A rs143237802 31637187 + 31637167 31637207 41 AAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGG AAGTCATCAAGACACCATCACACAGATGGCGCCTACTTCGG < 41bp 1 0.591357582568758 1 0.0221534669399261 experiment 0.817284834862484 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CSNK2B ENSG00000204435;ENSG00000263020 CDS Human other chr6:31637187 chr6:31637190 synonymous SNV . 0 24 hm5C_associated_SNPs_6794 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:31637110-31637195
64251 chr6 31638970 31638970 1 + C G rs141943810 31638959 + 31638939 31638979 41 TTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGAC TTCCCGACATCCGGACGTGCCACTTCTGCCTGGTAGAAGAC < 41bp 1 0.340212933002915 1 0.0574301481246948 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638959 chr6:31638970 nonsynonymous SNV 0.424 0 32 hm5C_associated_SNPs_6795 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31638946-31638994
64251 chr6 31638970 31638970 1 + C G rs141943810 31638961 + 31638941 31638981 41 CCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCC CCCGACATCCGGACGTGCCACTTCTGCCTGGTAGAAGACCC < 41bp 1 0.334872711651821 1 0.0467779934406281 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638961 chr6:31638970 nonsynonymous SNV 0.424 0 30 hm5C_associated_SNPs_6796 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31638946-31638994
64251 chr6 31707829 31707829 1 + T C rs28381345 31707823 + 31707803 31707843 41 CGGTCAGCGGGGCGTTCTCCCACCTGTAGCGACTCAGGTTA CGGTCAGCGGGGCGTTCTCCCACCTGCAGCGACTCAGGTTA < 41bp 1 0.391067804456634 1 0.144110321998596 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MSH5-SAPCD1 ENSG00000204410;ENSG00000255152 UTR5 Human other chr6:31707823 chr6:31707829 . . 0 27 hm5C_associated_SNPs_6797 0 0 4 DDX3X POSTAR2 ENCODE chr6:31707785-31707846
64251 chr6 31708305 31708305 1 + C T rs200570010 31708322 + 31708302 31708342 41 CCTCCTCCGGCTTCCCCAGCCCGGCCCCAGTGCCGGGCCCC CCTTCTCCGGCTTCCCCAGCCCGGCCCCAGTGCCGGGCCCC < 41bp 1 0.288140672967693 1 0.614670157432556 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31708322 chr6:31708305 nonsynonymous SNV 0.000 1 4 hm5C_associated_SNPs_6798 0 0 5 BUD13 POSTAR2 ENCODE chr6:31708248-31708327
64251 chr6 31708328 31708328 1 + C T rs2075789 31708322 + 31708302 31708342 41 CCTCCTCCGGCTTCCCCAGCCCGGCCCCAGTGCCGGGCCCC CCTCCTCCGGCTTCCCCAGCCCGGCCTCAGTGCCGGGCCCC < 41bp 1 0.317183438202707 1 0.678473055362701 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31708322 chr6:31708328 nonsynonymous SNV 0.006 1 27 hm5C_associated_SNPs_6799 1 0 2 SRSF1 POSTAR2 ENCODE chr6:31708258-31708328
64251 chr6 31795521 31795521 1 + C T rs548638667 31795525 + 31795505 31795545 41 GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGG GCGGTCCGGAAAACGGTCAGCCTGAGGAGCTGCTGCGAGGG < 41bp 1 0.290875324075463 1 0.13013169169426 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795525 chr6:31795521 . . 0 17 hm5C_associated_SNPs_6800 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795521 31795521 1 + C T rs548638667 31795526 + 31795506 31795546 41 CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGGT CGGTCCGGAAAACGGTCAGCCTGAGGAGCTGCTGCGAGGGT < 41bp 1 0.413909252467705 1 0.541800618171692 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795526 chr6:31795521 . . 0 16 hm5C_associated_SNPs_6801 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795536 31795536 1 + G A rs11576014 31795525 + 31795505 31795545 41 GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGG GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTACTGCGAGGG < 41bp 1 0.240035860878371 1 0.104511708021164 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795525 chr6:31795536 . . 0 32 hm5C_associated_SNPs_6802 0 0 26 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795536 31795536 1 + G A rs11576014 31795526 + 31795506 31795546 41 CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGGT CGGTCCGGAAAACGGCCAGCCTGAGGAGCTACTGCGAGGGT < 41bp 1 0.42103842643861 1 0.482290774583817 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795526 chr6:31795536 . . 0 31 hm5C_associated_SNPs_6803 0 0 26 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795540 31795540 1 + C G rs368738599 31795525 + 31795505 31795545 41 GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGG GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGGGAGGG < 41bp 1 0.22574905153115 1 0.118109226226807 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795525 chr6:31795540 . . 0 36 hm5C_associated_SNPs_6804 0 0 37 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795540 31795540 1 + C G rs368738599 31795526 + 31795506 31795546 41 CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGGT CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGGGAGGGT < 41bp 1 0.352742353871983 1 0.440526604652405 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795526 chr6:31795540 . . 0 35 hm5C_associated_SNPs_6805 0 0 37 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795542 31795542 1 + A G rs553797882 31795525 + 31795505 31795545 41 GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGG GCGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGGGGG < 41bp 1 0.258469091398752 1 0.215961664915085 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795525 chr6:31795542 . . 0 38 hm5C_associated_SNPs_6806 0 0 36 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31795542 31795542 1 + A G rs553797882 31795526 + 31795506 31795546 41 CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGAGGGT CGGTCCGGAAAACGGCCAGCCTGAGGAGCTGCTGCGGGGGT < 41bp 1 0.416926060146031 1 0.563564896583557 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795526 chr6:31795542 . . 0 37 hm5C_associated_SNPs_6807 0 0 36 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr6 31802741 31802741 1 + C G rs17201227 31802742 + 31802722 31802762 41 AGTATGAGAGTTGTAATGGCCCGACTGTTGAGTGAGGGGGA AGTATGAGAGTTGTAATGGGCCGACTGTTGAGTGAGGGGGA < 41bp 1 0.127378259312159 1 0.313608288764954 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802742 chr6:31802741 . . 0 20 hm5C_associated_SNPs_6808 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:31802680-31802760
64251 chr6 31802741 31802741 1 + C G rs17201227 31802743 + 31802723 31802763 41 GTATGAGAGTTGTAATGGCCCGACTGTTGAGTGAGGGGGAG GTATGAGAGTTGTAATGGGCCGACTGTTGAGTGAGGGGGAG < 41bp 1 0.323254536258993 1 0.424664914608002 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802743 chr6:31802741 . . 0 19 hm5C_associated_SNPs_6809 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:31802680-31802760
64251 chr6 31803074 31803074 1 + C T rs17201241 31803054 + 31803034 31803074 41 GAAGGGAGTGATGATGACCCCAGGTAACTCTTGAGTGTGTC GAAGGGAGTGATGATGACCCCAGGTAACTCTTGAGTGTGTT < 41bp 1 0.498854470127082 1 0.551426887512207 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803054 chr6:31803074 . . 0 41 hm5C_associated_SNPs_6810 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803061 + 31803041 31803081 41 GTGATGATGACCCCAGGTAACTCTTGAGTGTGTCGCTGATG GTGATGATGACCCCAGGTAACTCTTGAGTGTGTTGCTGATG < 41bp 1 0.297116595041407 1 0.0881207287311554 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803061 chr6:31803074 . . 0 34 hm5C_associated_SNPs_6811 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803076 + 31803056 31803096 41 GGTAACTCTTGAGTGTGTCGCTGATGCCATCACCGCAGCGC GGTAACTCTTGAGTGTGTTGCTGATGCCATCACCGCAGCGC < 41bp 1 0.424491871350322 1 0.238824635744095 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803076 chr6:31803074 . . 0 19 hm5C_associated_SNPs_6812 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803082 + 31803062 31803102 41 TCTTGAGTGTGTCGCTGATGCCATCACCGCAGCGCTCTGAC TCTTGAGTGTGTTGCTGATGCCATCACCGCAGCGCTCTGAC < 41bp 1 0.0803170736727187 1 0.0578368902206421 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803082 chr6:31803074 . . 0 13 hm5C_associated_SNPs_6813 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803083 + 31803063 31803103 41 CTTGAGTGTGTCGCTGATGCCATCACCGCAGCGCTCTGACC CTTGAGTGTGTTGCTGATGCCATCACCGCAGCGCTCTGACC < 41bp 1 0.414758224512589 1 0.146639913320541 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803083 chr6:31803074 . . 0 12 hm5C_associated_SNPs_6814 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803086 + 31803066 31803106 41 GAGTGTGTCGCTGATGCCATCACCGCAGCGCTCTGACCGCC GAGTGTGTTGCTGATGCCATCACCGCAGCGCTCTGACCGCC < 41bp 1 0.628347804306566 1 0.7578946352005 experiment 0.743304391386868 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803086 chr6:31803074 . . 0 9 hm5C_associated_SNPs_6815 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803088 + 31803068 31803108 41 GTGTGTCGCTGATGCCATCACCGCAGCGCTCTGACCGCCCC GTGTGTTGCTGATGCCATCACCGCAGCGCTCTGACCGCCCC < 41bp 1 0.70086038019168 1 0.709663510322571 experiment 0.598279239616639 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803088 chr6:31803074 . . 0 7 hm5C_associated_SNPs_6816 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803089 + 31803069 31803109 41 TGTGTCGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCC TGTGTTGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCC < 41bp 1 0.559160325863982 1 0.824183583259583 experiment 0.881679348272036 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803089 chr6:31803074 . . 0 6 hm5C_associated_SNPs_6817 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803091 + 31803071 31803111 41 TGTCGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCCTC TGTTGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCCTC < 41bp 1 0.724714973315882 1 0.593485236167908 experiment 0.550570053368235 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803091 chr6:31803074 . . 0 4 hm5C_associated_SNPs_6818 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31803074 31803074 1 + C T rs17201241 31803094 + 31803074 31803114 41 CGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCCTCGGT TGCTGATGCCATCACCGCAGCGCTCTGACCGCCCCCTCGGT < 41bp 1 0.109965505542785 1 0.0617561042308807 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD48 ENSG00000201823 ncRNA_exonic Human snoRNA chr6:31803094 chr6:31803074 . . 0 1 hm5C_associated_SNPs_6819 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31803053-31803074
64251 chr6 31868828 31868828 1 - G C rs376539476 31868814 - 31868794 31868834 41 CTTGCTCCTCTCCTGCTACACGGGCGCCTTGGAATTCGCTG CTTGCTGCTCTCCTGCTACACGGGCGCCTTGGAATTCGCTG < 41bp 1 0.496840919645103 1 0.758299708366394 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZBTB12 ENSG00000204366 CDS Human protein_coding chr6:31868814 chr6:31868828 synonymous SNV . 0 7 hm5C_associated_SNPs_6820 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr6:31868808-31868835
64251 chr6 31912773 31912773 1 + A G rs45507391 31912772 + 31912752 31912792 41 GGCAGGAGAATCTGGGGGAGCAGTTTTCCTTGAGCGGAGAT GGCAGGAGAATCTGGGGGAGCGGTTTTCCTTGAGCGGAGAT < 41bp 1 0.199837208117081 1 0.327765703201294 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C2 ENSG00000166278 CDS Human protein_coding chr6:31912772 chr6:31912773 synonymous SNV . 0 22 hm5C_associated_SNPs_6821 3 0 2 PRPF8 POSTAR2 ENCODE chr6:31912762-31912859
64251 chr6 31914179 31914179 1 + C G rs12614 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCGGGC < 41bp 1 0.716226281409808 1 0.978486180305481 experiment 0.567547437180383 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914179 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_6822 0 1 4 DDX3X POSTAR2 ENCODE chr6:31914165-31914220
64251 chr6 31914180 31914180 1 + G A rs641153 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCAGC < 41bp 1 0.702867042757256 1 0.985603332519531 experiment 0.594265914485488 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914180 nonsynonymous SNV 0.000 0 39 hm5C_associated_SNPs_6823 7 1 4 DDX3X POSTAR2 ENCODE chr6:31914165-31914220
64251 chr6 31926721 31926721 1 - C G rs546698443 31926733 - 31926713 31926753 41 GCTACGTCATCGTTGTGAGCCCGCTATCAGCGGCCAGCGCG GCTACGTCATCGTTGTGAGCCCGCTATCAGCGCCCAGCGCG < 41bp 1 0.461854194536654 1 0.424241840839386 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NELFE;SKIV2L ENSG00000204356 UTR5 Human protein_coding chr6:31926733 chr6:31926721 . . 0 33 hm5C_associated_SNPs_6824 1 0 6 DDX3X POSTAR2 ENCODE chr6:31926667-31926727
64251 chr6 31926977 31926977 1 + A C rs557492102 31926985 + 31926965 31927005 41 CCAGGATGATGGAGACAGAGCGACTTGGTGAGGGGGAGGGG CCAGGATGATGGCGACAGAGCGACTTGGTGAGGGGGAGGGG < 41bp 1 0.349265585822642 1 0.28298020362854 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31926985 chr6:31926977 nonsynonymous SNV 0.859 1 13 hm5C_associated_SNPs_6825 0 0 3 DDX3X POSTAR2 ENCODE chr6:31926943-31926992
64251 chr6 31936126 31936126 1 + C A rs146035089 31936137 + 31936117 31936157 41 CCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTC CCTTGCAGCAGTGACCACTGCTGTCCAGGAACTGCTGCGTC < 41bp 1 0.243294591593092 1 0.163146138191223 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31936137 chr6:31936126 synonymous SNV . 0 10 hm5C_associated_SNPs_6828 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:31936102-31936140
64251 chr6 31936668 31936668 1 + T C rs410851 31936653 + 31936633 31936673 41 CCCTTTTTCTTGCAGGTGCTCCGAACCCTGGGTTATGTGGA CCCTTTTTCTTGCAGGTGCTCCGAACCCTGGGTTACGTGGA < 41bp 1 0.346458690556499 1 0.749715566635132 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31936653 chr6:31936668 synonymous SNV . 0 36 hm5C_associated_SNPs_6829 2 0 13 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:31936645-31936669
64251 chr6 32134295 32134295 1 + A C rs148110134 32134276 + 32134256 32134296 41 TCCTCTGGCATGGACGCAGTCAGGGAGTCTGCTCCAAGCAG TCCTCTGGCATGGACGCAGTCAGGGAGTCTGCTCCAAGCCG < 41bp 1 0.744080328914845 1 0.855937957763672 experiment 0.51183934217031 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134276 chr6:32134295 nonsynonymous SNV 0.960 1 40 hm5C_associated_SNPs_6832 0 0 3 BUD13 POSTAR2 ENCODE chr6:32134253-32134303
64251 chr6 32942264 32942264 1 + T C rs3752528 32942278 + 32942258 32942298 41 GCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG GCAGGGCTGCTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG < 41bp 1 0.534085681558252 1 0.273379266262054 experiment 0.931828636883496 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32942278 chr6:32942264 synonymous SNV . 0 7 hm5C_associated_SNPs_6834 0 0 37 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:32942239-32942266
64251 chr6 32942277 32942277 1 + G A rs55650502 32942278 + 32942258 32942298 41 GCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG GCAGGGTTGCTGGGGCTGGACCCAGAAGCAGCAGCACCAGG < 41bp 1 0.532219897811247 1 0.322850465774536 experiment 0.935560204377506 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32942278 chr6:32942277 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_6835 0 0 34 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:32942239-32942282
64251 chr6 33169571 33169571 1 + T C rs137873161 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTTTGTCCTCTCCCTTATCCCCGTGGA < 41bp 1 0.115219186088107 1 0.0913550853729248 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169571 nonsynonymous SNV 0.998 2 26 hm5C_associated_SNPs_6838 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr6 33169581 33169581 1 + C G rs11538810 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCGGTGGA < 41bp 1 0.133614984667487 1 0.0355851948261261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169581 synonymous SNV . 0 36 hm5C_associated_SNPs_6839 0 0 17 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr6 33171854 33171854 1 + C G rs116902687 33171842 + 33171822 33171862 41 ATTTGGAAGGCTAAATGGGGCCATGAAGAAGGCTGGAAGGG ATTTGGAAGGCTAAATGGGGCCATGAAGAAGGGTGGAAGGG < 41bp 1 0.214846893050937 1 0.264466285705566 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SLC39A7 ENSG00000112473 UTR3 Human protein_coding chr6:33171842 chr6:33171854 . . 0 33 hm5C_associated_SNPs_6840 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:33171777-33171855
64251 chr6 33239869 33239869 1 + C A rs17215231 33239873 + 33239853 33239893 41 TCTCTTCCACAGGAGGCCTACACGCCGCCGCTTGTGCTGCA TCTCTTCCACAGGAGGACTACACGCCGCCGCTTGTGCTGCA < 41bp 1 0.422434806988923 1 0.299492388963699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS18 ENSG00000231500 UTR5 Human protein_coding chr6:33239873 chr6:33239869 . . 0 17 hm5C_associated_SNPs_6842 0 0 26 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:33239840-33239880
64251 chr6 33239892 33239892 1 + C T rs550306811 33239873 + 33239853 33239893 41 TCTCTTCCACAGGAGGCCTACACGCCGCCGCTTGTGCTGCA TCTCTTCCACAGGAGGCCTACACGCCGCCGCTTGTGCTGTA < 41bp 1 0.388694948181505 1 0.351282149553299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS18 ENSG00000231500 UTR5 Human protein_coding chr6:33239873 chr6:33239892 . . 0 40 hm5C_associated_SNPs_6843 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:33239855-33239899
64251 chr6 33258619 33258619 1 + C A rs743946 33258608 + 33258588 33258628 41 AGGCAGCAAAGGCAGGGGCTCCTGGCAAGGCCTGACCCCAT AGGCAGCAAAGGCAGGGGCTCCTGGCAAGGCATGACCCCAT < 41bp 1 0.682547208513518 1 0.347821772098541 experiment 0.634905582972965 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PFDN6 ENSG00000204220 CDS Human protein_coding chr6:33258608 chr6:33258619 synonymous SNV . 0 32 hm5C_associated_SNPs_6844 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr6:33258605-33258630
64251 chr6 33411299 33411299 1 + C T rs61421477 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGGACCTCTCTTCTGGGGTCCCCAAGCCCC < 41bp 1 0.252867424448495 1 0.249261260032654 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411299 synonymous SNV . 0 25 hm5C_associated_SNPs_6845 2 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr6 33638138 33638138 1 + C A rs2229633 33638147 + 33638127 33638167 41 ATGTGCTTGGACCGCCAGTACTTGGCCATCGACGAGATCTC ATGTGCTTGGAACGCCAGTACTTGGCCATCGACGAGATCTC < 41bp 1 0.270942851545004 1 0.235840439796448 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33638147 chr6:33638138 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_6846 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:33638129-33638150
64251 chr6 33656548 33656548 1 + C T rs142850920 33656530 + 33656510 33656550 41 AACATCATCATTGCCTTCTTCTACCCTTACATGGAGGGCGC AACATCATCATTGCCTTCTTCTACCCTTACATGGAGGGTGC < 41bp 1 0.108012614914791 1 0.227627515792847 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33656530 chr6:33656548 synonymous SNV . 0 39 hm5C_associated_SNPs_6847 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:33656523-33656554
64251 chr6 34213219 34213219 1 + T G rs372041536 34213236 + 34213216 34213256 41 CTTTGTCACCACGTGGGGCTCACTTTTCATCCTTCCCCAAC CTTGGTCACCACGTGGGGCTCACTTTTCATCCTTCCCCAAC < 41bp 1 0.53122324424242 1 0.0139484405517578 experiment 0.937553511515161 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34213236 chr6:34213219 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_6848 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:34213200-34213240
64251 chr6 34213250 34213250 1 + C G rs111748592 34213236 + 34213216 34213256 41 CTTTGTCACCACGTGGGGCTCACTTTTCATCCTTCCCCAAC CTTTGTCACCACGTGGGGCTCACTTTTCATCCTTGCCCAAC < 41bp 1 0.513407960357356 1 0.0162706077098846 experiment 0.973184079285287 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34213236 chr6:34213250 nonsynonymous SNV . 0 35 hm5C_associated_SNPs_6849 0 0 45 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:34213200-34213260
64251 chr6 34213497 34213497 1 + C T rs537322378 34213510 + 34213490 34213530 41 CGCCACTCAGCCATTTCCCCCTCCTCAGATGGGGCACCAAT CGCCACTTAGCCATTTCCCCCTCCTCAGATGGGGCACCAAT < 41bp 1 0.309242427402104 1 0.693559408187866 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HMGA1 ENSG00000137309 UTR3 Human protein_coding chr6:34213510 chr6:34213497 . . 0 8 hm5C_associated_SNPs_6850 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831623 chr6:34213480-34213500
64251 chr6 34213675 34213675 1 + G A rs149013137 34213674 + 34213654 34213694 41 ATGTTCCATTCTTCGACATCCGTCATTGCTGCTGCTACCAG ATGTTCCATTCTTCGACATCCATCATTGCTGCTGCTACCAG < 41bp 1 0.47627572109144 1 0.42156994342804 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HMGA1 ENSG00000137309 UTR3 Human protein_coding chr6:34213674 chr6:34213675 . . 0 22 hm5C_associated_SNPs_6851 0 0 47 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:34213580-34213680
64251 chr6 34857091 34857091 1 + G A rs548887218 34857107 + 34857087 34857127 41 GGGGGTGCGTTGCCCGGAGACGGAAAGTTTGGGAGCCCGAG GGGGATGCGTTGCCCGGAGACGGAAAGTTTGGGAGCCCGAG < 41bp 1 0.769294224039982 1 0.775051951408386 experiment 0.461411551920035 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKS1A ENSG00000064999 UTR5 Human protein_coding chr6:34857107 chr6:34857091 . . 0 5 hm5C_associated_SNPs_6852 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:34857090-34857091
64251 chr6 35058052 35058052 1 + G A rs74826129 35058038 + 35058018 35058058 41 GCCCATGAGCTACCGCTGTACAGTTCTCGGCCCCGGCTTTC GCCCATGAGCTACCGCTGTACAGTTCTCGGCCCCAGCTTTC < 41bp 1 0.148596767526505 1 0.0675880014896393 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ANKS1A ENSG00000064999 UTR3 Human protein_coding chr6:35058038 chr6:35058052 . . 0 35 hm5C_associated_SNPs_6853 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:35058035-35058060
64251 chr6 35392267 35392267 1 + C T rs9658163 35392256 + 35392236 35392276 41 CAGTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGC CAGTGGAGACCGTGCGGGAGCTCACTGAGTTTGCCAAGAGC < 41bp 1 0.265450049165289 1 0.129073053598404 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392256 chr6:35392267 synonymous SNV . 0 32 hm5C_associated_SNPs_6854 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35392267 35392267 1 + C T rs9658163 35392258 + 35392238 35392278 41 GTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGCAT GTGGAGACCGTGCGGGAGCTCACTGAGTTTGCCAAGAGCAT < 41bp 1 0.429179630420647 1 0.148059666156769 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392258 chr6:35392267 synonymous SNV . 0 30 hm5C_associated_SNPs_6855 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35394671 35394671 1 + G A rs9658173 35394682 + 35394662 35394702 41 GCACTGGCCGCTGGACGGCACTCTCCCAGCTTGGAAGTAGG GCACTGGCCACTGGACGGCACTCTCCCAGCTTGGAAGTAGG < 41bp 1 0.0684062022487425 1 0.0880369544029236 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPARD ENSG00000112033 UTR3 Human protein_coding chr6:35394682 chr6:35394671 . . 0 10 hm5C_associated_SNPs_6856 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:35394662-35394689
64251 chr6 35436183 35436183 1 + C T rs368308609 35436189 + 35436169 35436209 41 AGACATGCTAGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAG AGACATGCTAGTCTTTTTTCCGGTTAGCGCGGCGTGAGAAG < 41bp 1 0.290182796508349 1 0.403675198554993 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10A ENSG00000198755 upstream Human protein_coding chr6:35436189 chr6:35436183 . . 0 15 hm5C_associated_SNPs_6859 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436183 35436183 1 + C T rs368308609 35436198 + 35436178 35436218 41 AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT AGTCTTTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT < 41bp 1 0.700631328759972 1 0.905789017677307 experiment 0.598737342480056 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 upstream Human protein_coding chr6:35436198 chr6:35436183 . . 0 6 hm5C_associated_SNPs_6860 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436183 35436183 1 + C T rs368308609 35436201 + 35436181 35436221 41 CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG CTTTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG < 41bp 1 0.422065246100244 1 0.469292223453522 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 upstream Human protein_coding chr6:35436201 chr6:35436183 . . 0 3 hm5C_associated_SNPs_6861 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436195 35436195 1 + G A rs41271257 35436189 + 35436169 35436209 41 AGACATGCTAGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAG AGACATGCTAGTCTCTTTTCCGGTTAACGCGGCGTGAGAAG < 41bp 1 0.298844737930685 1 0.766702115535736 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436189 chr6:35436195 . . 0 27 hm5C_associated_SNPs_6862 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436195 35436195 1 + G A rs41271257 35436198 + 35436178 35436218 41 AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT AGTCTCTTTTCCGGTTAACGCGGCGTGAGAAGCCATGAGGT < 41bp 1 0.773037610707094 1 0.91005551815033 experiment 0.453924778585811 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436198 chr6:35436195 . . 0 18 hm5C_associated_SNPs_6863 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436195 35436195 1 + G A rs41271257 35436201 + 35436181 35436221 41 CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG CTCTTTTCCGGTTAACGCGGCGTGAGAAGCCATGAGGTGAG < 41bp 1 0.366694732062277 1 0.479546368122101 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436201 chr6:35436195 . . 0 15 hm5C_associated_SNPs_6864 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436196 35436196 1 + C T rs373878090 35436189 + 35436169 35436209 41 AGACATGCTAGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAG AGACATGCTAGTCTCTTTTCCGGTTAGTGCGGCGTGAGAAG < 41bp 1 0.274539557563713 1 0.624691963195801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436189 chr6:35436196 . . 0 28 hm5C_associated_SNPs_6865 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436196 35436196 1 + C T rs373878090 35436198 + 35436178 35436218 41 AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT AGTCTCTTTTCCGGTTAGTGCGGCGTGAGAAGCCATGAGGT < 41bp 1 0.704739774543405 1 0.934492826461792 experiment 0.59052045091319 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436198 chr6:35436196 . . 0 19 hm5C_associated_SNPs_6866 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436196 35436196 1 + C T rs373878090 35436201 + 35436181 35436221 41 CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG CTCTTTTCCGGTTAGTGCGGCGTGAGAAGCCATGAGGTGAG < 41bp 1 0.396325033131583 1 0.501543164253235 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436201 chr6:35436196 . . 0 16 hm5C_associated_SNPs_6867 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 36570649 36570649 1 + T C rs556558848 36570640 + 36570620 36570660 41 TATAACATTCCTATTGGAAGCCATACTTATATTTTCTTGTA TATAACATTCCTATTGGAAGCCATACTTACATTTTCTTGTA < 41bp 1 0.182255616331588 1 0.283778578042984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRSF3 ENSG00000112081 UTR3 Human protein_coding chr6:36570640 chr6:36570649 . . 0 30 hm5C_associated_SNPs_6868 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:36570621-36570658
64251 chr6 37280744 37280744 1 + C A rs116200452 37280749 + 37280729 37280769 41 TCTCAAGACATGCTGCGAAGCATTGAGGCTGACAGCTTTTG TCTCAAGACATGCTGAGAAGCATTGAGGCTGACAGCTTTTG < 41bp 1 0.178009173827122 1 0.0697490274906158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37280749 chr6:37280744 synonymous SNV . 0 16 hm5C_associated_SNPs_6869 0 0 2 BUD13 POSTAR2 ENCODE chr6:37280660-37280788
64251 chr6 37787623 37787623 1 + C T rs182727321 37787627 + 37787607 37787647 41 CCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGCCGCCACC CCCCCTCCCCCCGCCCTGAGCCCCCCGACGCCGCCGCCACC < 41bp 1 0.493328080170341 1 0.0415627062320709 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787627 chr6:37787623 . . 0 17 hm5C_associated_SNPs_6870 0 0 2 SERBP1 POSTAR2 ENCODE chr6:37787617-37787721
64251 chr6 37787623 37787623 1 + C T rs182727321 37787637 + 37787617 37787657 41 CCGCCCCGAGCCCCCCGACGCCGCCGCCACCGCCTCCTCAG CCGCCCTGAGCCCCCCGACGCCGCCGCCACCGCCTCCTCAG < 41bp 1 0.630831880723285 1 0.148084342479706 experiment 0.738336238553429 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787637 chr6:37787623 . . 0 7 hm5C_associated_SNPs_6871 0 0 2 SERBP1 POSTAR2 ENCODE chr6:37787617-37787721
64251 chr6 37787640 37787640 1 + C G rs539970158 37787623 + 37787603 37787643 41 CCTTCCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGCCGC CCTTCCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGGCGC < 41bp 1 0.777594539388894 1 0.769154608249664 experiment 0.444810921222213 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787623 chr6:37787640 . . 0 38 hm5C_associated_SNPs_6872 0 0 3 GEMIN5 POSTAR2 ENCODE chr6:37787639-37787736
64251 chr6 37787640 37787640 1 + C G rs539970158 37787627 + 37787607 37787647 41 CCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGCCGCCACC CCCCCTCCCCCCGCCCCGAGCCCCCCGACGCCGGCGCCACC < 41bp 1 0.452641623959341 1 0.056162565946579 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787627 chr6:37787640 . . 0 34 hm5C_associated_SNPs_6873 0 0 3 GEMIN5 POSTAR2 ENCODE chr6:37787639-37787736
64251 chr6 37787640 37787640 1 + C G rs539970158 37787637 + 37787617 37787657 41 CCGCCCCGAGCCCCCCGACGCCGCCGCCACCGCCTCCTCAG CCGCCCCGAGCCCCCCGACGCCGGCGCCACCGCCTCCTCAG < 41bp 1 0.770212959154591 1 0.695127248764038 experiment 0.459574081690818 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787637 chr6:37787640 . . 0 24 hm5C_associated_SNPs_6874 0 0 3 GEMIN5 POSTAR2 ENCODE chr6:37787639-37787736
64251 chr6 38120922 38120922 1 + G A rs191633375 38120918 + 38120898 38120938 41 CAGCCAGAGTGCCCCGCCTCCGCCGGCTCTGGTCTGCCATT CAGCCAGAGTGCCCCGCCTCCGCCAGCTCTGGTCTGCCATT < 41bp 1 0.730811623267294 1 0.861953616142273 experiment 0.538376753465412 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZFAND3 ENSG00000156639 UTR3 Human protein_coding chr6:38120918 chr6:38120922 . . 0 25 hm5C_associated_SNPs_6875 0 0 9 CPSF1 POSTAR2 GSE37401,GSM917673 chr6:38120901-38120922
64251 chr6 41567627 41567627 1 + C T rs73733287 41567645 + 41567625 41567665 41 CCCGCCTCTCCCCCCGCCGCCCCACCAGTTAAACGGATGAC CCTGCCTCTCCCCCCGCCGCCCCACCAGTTAAACGGATGAC < 41bp 1 0.0239563499045941 1 0.242911219596863 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXP4 ENSG00000137166 UTR3 Human protein_coding chr6:41567645 chr6:41567627 . . 0 3 hm5C_associated_SNPs_6876 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:41567601-41567650
64251 chr6 41755412 41755412 1 + G C rs76995785 41755410 + 41755390 41755430 41 ACGCCGATACGGTTCCTCCACCGAGGCCCATGCGAAGCTTT ACGCCGATACGGTTCCTCCACCCAGGCCCATGCGAAGCTTT < 41bp 1 0.267274504890123 1 0.0518769025802612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOMM6 ENSG00000214736;ENSG00000124593 UTR5;UTR3 Human other chr6:41755410 chr6:41755412 . . 0 23 hm5C_associated_SNPs_6877 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:41755396-41755435
64251 chr6 42573513 42573513 1 + T C rs17855250 42573505 + 42573485 42573525 41 TGCTGTTTAATGATGAGGTTCACACCTATGAACAAGTTATT TGCTGTTTAATGATGAGGTTCACACCTACGAACAAGTTATT < 41bp 1 0.0652626508729152 1 0.0690574944019318 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBR2 ENSG00000024048 CDS Human protein_coding chr6:42573505 chr6:42573513 synonymous SNV . 0 29 hm5C_associated_SNPs_6886 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42573492-42573530
64251 chr6 42854647 42854647 1 + G A rs192495885 42854631 + 42854611 42854651 41 AGTCCCAGCTACTCGAGAGGCTAAGGCAGGAAAATCGCTTG AGTCCCAGCTACTCGAGAGGCTAAGGCAGGAAAATCACTTG < 41bp 1 0.740388085706724 1 0.60254317522049 experiment 0.519223828586553 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42854631 chr6:42854647 . . 0 37 hm5C_associated_SNPs_6889 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:42854640-42854686
64251 chr6 42855945 42855945 1 + C G rs552431809 42855933 + 42855913 42855953 41 GAGACAGTCTCACCCTGTTGCCCAGGCTGGAGCGCAGTGGC GAGACAGTCTCACCCTGTTGCCCAGGCTGGAGGGCAGTGGC < 41bp 1 0.192756397978543 1 0.110186189413071 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855933 chr6:42855945 . . 0 33 hm5C_associated_SNPs_6890 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855934 + 42855914 42855954 41 AGACAGTCTCACCCTGTTGCCCAGGCTGGAGCGCAGTGGCA AGACAGTCTCACCCTGTTGCCCAGGCTGGAGGGCAGTGGCA < 41bp 1 0.30747088181182 1 0.0933652818202972 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855934 chr6:42855945 . . 0 32 hm5C_associated_SNPs_6891 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855935 + 42855915 42855955 41 GACAGTCTCACCCTGTTGCCCAGGCTGGAGCGCAGTGGCAT GACAGTCTCACCCTGTTGCCCAGGCTGGAGGGCAGTGGCAT < 41bp 1 0.394740472422187 1 0.682636857032776 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855935 chr6:42855945 . . 0 31 hm5C_associated_SNPs_6892 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855939 + 42855919 42855959 41 GTCTCACCCTGTTGCCCAGGCTGGAGCGCAGTGGCATGATC GTCTCACCCTGTTGCCCAGGCTGGAGGGCAGTGGCATGATC < 41bp 1 0.748454379509852 1 0.487772524356842 experiment 0.503091240980296 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855939 chr6:42855945 . . 0 27 hm5C_associated_SNPs_6893 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855947 + 42855927 42855967 41 CTGTTGCCCAGGCTGGAGCGCAGTGGCATGATCTCAGCTCA CTGTTGCCCAGGCTGGAGGGCAGTGGCATGATCTCAGCTCA < 41bp 1 0.404858457223272 1 0.448146879673004 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855947 chr6:42855945 . . 0 19 hm5C_associated_SNPs_6894 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855953 + 42855933 42855973 41 CCCAGGCTGGAGCGCAGTGGCATGATCTCAGCTCATTGCAG CCCAGGCTGGAGGGCAGTGGCATGATCTCAGCTCATTGCAG < 41bp 1 0.63887329806449 1 0.296197980642319 experiment 0.722253403871019 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855953 chr6:42855945 . . 0 13 hm5C_associated_SNPs_6895 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855959 + 42855939 42855979 41 CTGGAGCGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCA CTGGAGGGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCA < 41bp 1 0.548471183874968 1 0.276508450508118 experiment 0.903057632250065 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855959 chr6:42855945 . . 0 7 hm5C_associated_SNPs_6896 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855961 + 42855941 42855981 41 GGAGCGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCACC GGAGGGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCACC < 41bp 1 0.620230410098199 1 0.815998256206512 experiment 0.759539179803602 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855961 chr6:42855945 . . 0 5 hm5C_associated_SNPs_6897 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42855945 42855945 1 + C G rs552431809 42855964 + 42855944 42855984 41 GCGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCACCTCC GGGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCACCTCC < 41bp 1 0.346878330194694 1 0.0962184369564056 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42855964 chr6:42855945 . . 0 2 hm5C_associated_SNPs_6898 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42855901-42855949
64251 chr6 42856146 42856146 1 + T C rs374276383 42856150 + 42856130 42856170 41 AAGTGATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTA AAGTGATCCACAAGCCCGGGCCTCCCAAAGTGCTGGGATTA < 41bp 1 0.00946528363272667 1 0.0888178944587708 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856150 chr6:42856146 . . 0 17 hm5C_associated_SNPs_6899 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856146 42856146 1 + T C rs374276383 42856151 + 42856131 42856171 41 AGTGATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTAC AGTGATCCACAAGCCCGGGCCTCCCAAAGTGCTGGGATTAC < 41bp 1 0.116025627567519 1 0.114864557981491 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856151 chr6:42856146 . . 0 16 hm5C_associated_SNPs_6900 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856146 42856146 1 + T C rs374276383 42856153 + 42856133 42856173 41 TGATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTACAG TGATCCACAAGCCCGGGCCTCCCAAAGTGCTGGGATTACAG < 41bp 1 0.200047164613859 1 0.0472400486469269 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856153 chr6:42856146 . . 0 14 hm5C_associated_SNPs_6901 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856146 42856146 1 + T C rs374276383 42856154 + 42856134 42856174 41 GATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTACAGG GATCCACAAGCCCGGGCCTCCCAAAGTGCTGGGATTACAGG < 41bp 1 0.273580573799421 1 0.189117550849915 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856154 chr6:42856146 . . 0 13 hm5C_associated_SNPs_6902 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856146 42856146 1 + T C rs374276383 42856155 + 42856135 42856175 41 ATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGC ATCCACAAGCCCGGGCCTCCCAAAGTGCTGGGATTACAGGC < 41bp 1 0.568686672697134 1 0.46983590722084 experiment 0.862626654605733 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856155 chr6:42856146 . . 0 12 hm5C_associated_SNPs_6903 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856146 42856146 1 + T C rs374276383 42856162 + 42856142 42856182 41 AGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCA AGCCCGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCA < 41bp 1 0.753727708762047 1 0.492666691541672 experiment 0.492544582475906 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856162 chr6:42856146 . . 0 5 hm5C_associated_SNPs_6904 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42856129-42856153
64251 chr6 42856179 42856179 1 + A G rs150681517 42856162 + 42856142 42856182 41 AGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCA AGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGGGCA < 41bp 1 0.734484375597113 1 0.525318622589111 experiment 0.531031248805774 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856162 chr6:42856179 . . 0 38 hm5C_associated_SNPs_6905 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr6:42856160-42856200
64251 chr6 42856179 42856179 1 + A G rs150681517 42856175 + 42856155 42856195 41 CAAAGTGCTGGGATTACAGGCATGAGCAACTGCGCCCAGCT CAAAGTGCTGGGATTACAGGCATGGGCAACTGCGCCCAGCT < 41bp 1 0.360559920864185 1 0.556151211261749 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856175 chr6:42856179 . . 0 25 hm5C_associated_SNPs_6906 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr6:42856160-42856200
64251 chr6 42856188 42856188 1 + G A rs112992088 42856175 + 42856155 42856195 41 CAAAGTGCTGGGATTACAGGCATGAGCAACTGCGCCCAGCT CAAAGTGCTGGGATTACAGGCATGAGCAACTGCACCCAGCT < 41bp 1 0.417951055792989 1 0.339552044868469 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 UTR3 Human protein_coding chr6:42856175 chr6:42856188 . . 0 34 hm5C_associated_SNPs_6907 0 0 4 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr6:42856160-42856200
64251 chr6 42996940 42996940 1 + A G rs148480237 42996946 + 42996926 42996966 41 CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGTAA CAGGCAAGGACAGGGGACATCTCCCTTTGAGCAAAGAGTAA < 41bp 1 0.445620826951666 1 0.650355935096741 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996946 chr6:42996940 nonsynonymous SNV 0.999 3 15 hm5C_associated_SNPs_6908 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42996843-42996956
64251 chr6 42996962 42996962 1 + A C rs376410795 42996946 + 42996926 42996966 41 CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGTAA CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGCGTAA < 41bp 1 0.479852368081547 1 0.752239346504211 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996946 chr6:42996962 nonsynonymous SNV 0.943 1 37 hm5C_associated_SNPs_6909 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:42996940-42996980
64251 chr6 43110003 43110003 1 + C T rs45453593 43110021 + 43110001 43110041 41 AACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT AATATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT < 41bp 1 0.0724645144505604 1 0.102291762828827 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK7 ENSG00000112655 CDS Human protein_coding chr6:43110021 chr6:43110003 synonymous SNV . 0 3 hm5C_associated_SNPs_6910 0 0 1 SND1 POSTAR2 ENCODE chr6:43110002-43110037
64251 chr6 43753212 43753212 1 + A G rs10434 43753213 + 43753193 43753233 41 CTTCTGAGTTGCCCAGGAGACCACTGGCAGATGTCCCGGCG CTTCTGAGTTGCCCAGGAGGCCACTGGCAGATGTCCCGGCG < 41bp 1 0.550602784409037 1 0.543534874916077 experiment 0.898794431181927 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEGFA ENSG00000112715 UTR3 Human protein_coding chr6:43753213 chr6:43753212 . . 0 20 hm5C_associated_SNPs_6913 0 0 3 GRWD1 POSTAR2 ENCODE chr6:43753194-43753237
64251 chr6 44197181 44197181 1 + G A rs8187630 44197173 + 44197153 44197193 41 TCATGCTGGGTCTGGGAACGCTGCTCCCGTGGAATTTTTTC TCATGCTGGGTCTGGGAACGCTGCTCCCATGGAATTTTTTC < 41bp 1 0.428338326305513 1 0.135340839624405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197173 chr6:44197181 synonymous SNV . 0 29 hm5C_associated_SNPs_6914 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:44197168-44197196
64251 chr6 44214827 44214827 1 + A C rs35966442 44214838 + 44214818 44214858 41 ACTTGGGGCACGCAGTAGCTCTCTCGAGTCACTCCGGCGCA ACTTGGGGCCCGCAGTAGCTCTCTCGAGTCACTCCGGCGCA < 41bp 1 0.3408496938011 1 0.150722593069077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSP90AB1 ENSG00000096384 UTR5 Human protein_coding chr6:44214838 chr6:44214827 . . 0 10 hm5C_associated_SNPs_6915 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:44214820-44214860
64251 chr6 44214828 44214828 1 + C A rs558489658 44214838 + 44214818 44214858 41 ACTTGGGGCACGCAGTAGCTCTCTCGAGTCACTCCGGCGCA ACTTGGGGCAAGCAGTAGCTCTCTCGAGTCACTCCGGCGCA < 41bp 1 0.321361618399174 1 0.115372955799103 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSP90AB1 ENSG00000096384 UTR5 Human protein_coding chr6:44214838 chr6:44214828 . . 0 11 hm5C_associated_SNPs_6916 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:44214820-44214860
64251 chr6 44218120 44218120 1 + A G rs13296 44218121 + 44218101 44218141 41 ATAAAGATGATGAAGAAAAACCCAAGATCGAAGATGTGGGT ATAAAGATGATGAAGAAAAGCCCAAGATCGAAGATGTGGGT < 41bp 1 0.507864862322459 1 0.169384002685547 experiment 0.984270275355082 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218121 chr6:44218120 synonymous SNV . 0 20 hm5C_associated_SNPs_6917 0 0 26 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:44218109-44218130
64251 chr6 44219803 44219803 1 + G A rs324134 44219794 + 44219774 44219814 41 GAGCGAGTGCGGAAACGGGGCTTCGAGGTGGTATATATGAC GAGCGAGTGCGGAAACGGGGCTTCGAGGTAGTATATATGAC < 41bp 1 0.22398425428742 1 0.395386278629303 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219794 chr6:44219803 synonymous SNV . 0 30 hm5C_associated_SNPs_6918 0 0 47 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44219803 44219803 1 + G A rs324134 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTAGTATATATGACCGAGCCCATTGACGAGTACT < 41bp 1 0.294512791019274 1 0.108332812786102 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219803 synonymous SNV . 0 10 hm5C_associated_SNPs_6919 0 0 47 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44219815 44219815 1 + C G rs149243943 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTGGTATATATGACGGAGCCCATTGACGAGTACT < 41bp 1 0.656976440127241 1 0.659808456897736 experiment 0.686047119745517 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219815 synonymous SNV . 0 22 hm5C_associated_SNPs_6920 0 0 64 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44219815 44219815 1 + C G rs149243943 44219827 + 44219807 44219847 41 TATATGACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCT TATATGACGGAGCCCATTGACGAGTACTGTGTGCAGCAGCT < 41bp 1 0.716446238737335 1 0.559751391410828 experiment 0.567107522525329 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219827 chr6:44219815 synonymous SNV . 0 9 hm5C_associated_SNPs_6921 0 0 64 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44219815 44219815 1 + C G rs149243943 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACGGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA < 41bp 1 0.512520646624403 1 0.0400611162185669 experiment 0.974958706751195 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219815 synonymous SNV . 0 3 hm5C_associated_SNPs_6922 0 0 64 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44221404 44221404 1 + G A rs11538984 44221411 + 44221391 44221431 41 CCACTGCAGCCTCGAGTGCCCCTGTCCCACCTGGCTCCCCC CCACTGCAGCCTCAAGTGCCCCTGTCCCACCTGGCTCCCCC < 41bp 1 0.346609353573376 1 0.0453041791915894 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSP90AB1 ENSG00000096384 UTR3 Human protein_coding chr6:44221411 chr6:44221404 . . 0 14 hm5C_associated_SNPs_6923 0 0 62 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44274725 44274725 1 - T A rs147091256 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CGTCGAGCTGTGCGTTTCTCCTTGGAGATCTTAAAGGCACC < 41bp 1 0.49433126532283 1 0.692099690437317 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274725 nonsynonymous SNV 0.095 0 22 hm5C_associated_SNPs_6924 2 0 3 GRWD1 POSTAR2 ENCODE chr6:44274661-44274751
64251 chr6 44376192 44376192 1 + A G rs141567880 44376196 + 44376176 44376216 41 TTTAGATTTCAGATGCAGAACTCCAGGAAGTTGTAAAAGTA TTTAGATTTCAGATGCGGAACTCCAGGAAGTTGTAAAAGTA < 41bp 1 0.681639413010198 1 0.916961908340454 experiment 0.636721173979604 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC5L ENSG00000096401 CDS Human protein_coding chr6:44376196 chr6:44376192 synonymous SNV . 0 17 hm5C_associated_SNPs_6925 0 0 15 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:44376180-44376200
64251 chr6 44376206 44376206 1 + T C rs200087867 44376196 + 44376176 44376216 41 TTTAGATTTCAGATGCAGAACTCCAGGAAGTTGTAAAAGTA TTTAGATTTCAGATGCAGAACTCCAGGAAGCTGTAAAAGTA < 41bp 1 0.77028396604558 1 0.938772261142731 experiment 0.45943206790884 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC5L ENSG00000096401 CDS Human protein_coding chr6:44376196 chr6:44376206 nonsynonymous SNV 0.997 2 31 hm5C_associated_SNPs_6926 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44376185-44376209
64251 chr6 47576969 47576969 1 + T A rs34069459 47576982 + 47576962 47577002 41 AAAAAAATTCCCTGGATGAACTTAGAGCCCAGATTATTGAA AAAAAAAATCCCTGGATGAACTTAGAGCCCAGATTATTGAA < 41bp 1 0.23126152534306 1 0.0954552292823792 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576982 chr6:47576969 nonsynonymous SNV 0.976 0 8 hm5C_associated_SNPs_6928 1 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr6 57049320 57049320 1 + A G rs143926222 57049327 + 57049307 57049347 41 TTTCCTGTCTGGCATGGAATCACGCAGTCACCTTGGGCATT TTTCCTGTCTGGCGTGGAATCACGCAGTCACCTTGGGCATT < 41bp 1 0.761861210451494 1 0.198816657066345 experiment 0.476277579097012 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BAG2 ENSG00000112208 UTR3 Human protein_coding chr6:57049327 chr6:57049320 . . 0 14 hm5C_associated_SNPs_6930 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:57049296-57049321
64251 chr6 57182453 57182453 1 + A G rs558821130 57182463 + 57182443 57182483 41 CCACCCGGGAACAGTGGCTGCCACCGTTTGTGTTTTCCCGA CCACCCGGGAGCAGTGGCTGCCACCGTTTGTGTTTTCCCGA < 41bp 1 0.189609983297106 1 0.274285733699799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRIM2 ENSG00000146143 UTR5 Human protein_coding chr6:57182463 chr6:57182453 . . 0 11 hm5C_associated_SNPs_6931 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:57182424-57182454
64251 chr6 64288832 64288832 1 + A G rs11547434 64288830 + 64288810 64288850 41 CTTTTGATGATGGTGCACCACCATCCAACCAGATTGTTGAT CTTTTGATGATGGTGCACCACCGTCCAACCAGATTGTTGAT < 41bp 1 0.074339705344068 1 0.193542987108231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTP4A1 ENSG00000112245 CDS Human protein_coding chr6:64288830 chr6:64288832 synonymous SNV . 0 23 hm5C_associated_SNPs_6932 0 0 7 UPF1 POSTAR2 GSE47976,GSM1163975 chr6:64288800-64288880
64251 chr6 64288832 64288832 1 + A G rs11547434 64288831 + 64288811 64288851 41 TTTTGATGATGGTGCACCACCATCCAACCAGATTGTTGATG TTTTGATGATGGTGCACCACCGTCCAACCAGATTGTTGATG < 41bp 1 0.160411193891577 1 0.227948069572449 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTP4A1 ENSG00000112245 CDS Human protein_coding chr6:64288831 chr6:64288832 synonymous SNV . 0 22 hm5C_associated_SNPs_6933 0 0 7 UPF1 POSTAR2 GSE47976,GSM1163975 chr6:64288800-64288880
64251 chr6 64290586 64290586 1 + C T rs575129323 64290589 + 64290569 64290609 41 TGCTCACTTTATGTTTACATCTCCCACATTCATACCAATAT TGCTCACTTTATGTTTATATCTCCCACATTCATACCAATAT < 41bp 1 0.353979678545329 1 0.130936622619629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTP4A1 ENSG00000112245 UTR3 Human protein_coding chr6:64290589 chr6:64290586 . . 0 18 hm5C_associated_SNPs_6934 0 0 86 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:64290537-64290617
64251 chr6 72003256 72003256 1 + T C rs35741445 72003257 + 72003237 72003277 41 ACTTCAAAGATATCCGATATCAAAATGACTTGAGCAATCTT ACTTCAAAGATATCCGATACCAAAATGACTTGAGCAATCTT < 41bp 1 0.596079605526124 1 0.233906120061874 experiment 0.807840788947753 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003257 chr6:72003256 synonymous SNV . 0 20 hm5C_associated_SNPs_6935 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:72003235-72003272
64251 chr6 80741206 80741206 1 + A G rs56007972 80741213 + 80741193 80741233 41 TCTTCTTCAGCAAATGAATGCATTTCGGTTAAAGGAAGAAT TCTTCTTCAGCAAGTGAATGCATTTCGGTTAAAGGAAGAAT < 41bp 1 0.0311986387858867 1 0.122527986764908 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTK ENSG00000112742 CDS Human protein_coding chr6:80741213 chr6:80741206 nonsynonymous SNV 0.983 0 14 hm5C_associated_SNPs_6940 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr6:80741199-80741222
64251 chr6 87967478 87967478 1 + T C rs142923098 87967481 + 87967461 87967501 41 GATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC GATGGGAAATTTATCTGCAGCAGGTGTTACAGGGCTTTTAC < 41bp 1 0.510137102982599 1 0.556366860866547 experiment 0.979725794034801 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87967481 chr6:87967478 synonymous SNV . 0 18 hm5C_associated_SNPs_6946 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:87967460-87967480
64251 chr6 88346196 88346196 1 + G T rs143108637 88346186 + 88346166 88346206 41 GGATTCAGAGGAGTATGCATCAGTCTTGCAGCTGCTGAGGT GGATTCAGAGGAGTATGCATCAGTCTTGCATCTGCTGAGGT < 41bp 1 0.224690198331979 1 0.598425209522247 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ORC3 ENSG00000135336 CDS Human protein_coding chr6:88346186 chr6:88346196 nonsynonymous SNV 0.797 4 31 hm5C_associated_SNPs_6947 0 0 1 UCHL5 POSTAR2 ENCODE chr6:88346158-88346199
64251 chr6 89872720 89872720 1 + A G rs143723220 89872740 + 89872720 89872760 41 AGGTGATGCACCTGCCTCGGCCTCCTAAAGTGCTGGGATTA GGGTGATGCACCTGCCTCGGCCTCCTAAAGTGCTGGGATTA < 41bp 1 0.165768727723315 1 0.24682742357254 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PM20D2 ENSG00000146281 UTR3 Human protein_coding chr6:89872740 chr6:89872720 . . 0 1 hm5C_associated_SNPs_6948 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:89872688-89872746
64251 chr6 90342259 90342259 1 - G A rs9362668 90342271 - 90342251 90342291 41 GGTGGCACACGCCTGTAGTCCCAAGCTACTTGCGAGGTTGA GGTGGCACACGCCTGTAGTCCCAAGCTACTTGTGAGGTTGA < 41bp 1 0.177028071026754 1 0.278421580791473 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKRD6;LYRM2 ENSG00000083099;ENSG00000135299 UTR3 Human other chr6:90342271 chr6:90342259 . . 0 33 hm5C_associated_SNPs_6949 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:90342225-90342261
64251 chr6 110062679 110062679 1 + A G rs61729092 110062698 + 110062678 110062718 41 CACTCTAATAGCTAGAAGATCCAGTAAATTTGCTGGCACCC CGCTCTAATAGCTAGAAGATCCAGTAAATTTGCTGGCACCC < 41bp 1 0.186783592416716 1 0.867338001728058 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FIG4 ENSG00000112367 CDS Human protein_coding chr6:110062698 chr6:110062679 nonsynonymous SNV 0.978 2 2 hm5C_associated_SNPs_6955 4 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:110062660-110062688
64251 chr6 110533361 110533361 1 + C T rs376762186 110533371 + 110533351 110533391 41 ACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTT ACTATCAAGGTAGGTCCTATCTTCACATACCTCAGGATGTT < 41bp 1 0.754213545594051 1 0.589447498321533 experiment 0.491572908811899 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC40 ENSG00000168438 CDS Human protein_coding chr6:110533371 chr6:110533361 synonymous SNV . 0 11 hm5C_associated_SNPs_6956 0 0 4 GRWD1 POSTAR2 ENCODE chr6:110533333-110533450
64251 chr6 111288941 111288941 1 + T C rs41289884 111288931 + 111288911 111288951 41 AAATAGAAGATTCTGGTCCTCTTATTGATATACCTTCTGAG AAATAGAAGATTCTGGTCCTCTTATTGATACACCTTCTGAG < 41bp 1 0.237136056562894 1 0.0892696976661682 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288931 chr6:111288941 nonsynonymous SNV 0.080 0 31 hm5C_associated_SNPs_6957 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr6:111288930-111288951
64251 chr6 117869594 117869594 1 + C T rs210622 117869589 + 117869569 117869609 41 CCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAAT CCTCAACCAGACGGCCATGACTGCCTTTTTGTGAACACAAT < 41bp 1 0.511281190350373 1 0.237118571996689 experiment 0.977437619299255 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869589 chr6:117869594 nonsynonymous SNV 0.995 2 26 hm5C_associated_SNPs_6960 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:117869538-117869598
64251 chr6 126251270 126251270 1 + G A rs147480564 126251268 + 126251248 126251288 41 AATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTCA AATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTCA < 41bp 1 0.65766432153766 1 0.73266726732254 experiment 0.68467135692468 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126251268 chr6:126251270 . . 0 23 hm5C_associated_SNPs_6964 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:126251213-126251277
64251 chr6 126251270 126251270 1 + G A rs147480564 126251269 + 126251249 126251289 41 ATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTCAA ATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTCAA < 41bp 1 0.798179495636533 1 0.578890442848206 experiment 0.403641008726934 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126251269 chr6:126251270 . . 0 22 hm5C_associated_SNPs_6965 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:126251213-126251277
64251 chr6 130461644 130461644 1 + G A rs147937465 130461660 + 130461640 130461680 41 TAGTGTATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGC TAGTATATTTTGAGTGGCATCAGTCTCACTCATCTTGGTGC < 41bp 1 0.190278332837334 1 0.145338863134384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control L3MBTL3 ENSG00000227678 ncRNA_intronic Human antisense chr6:130461660 chr6:130461644 . . 0 5 hm5C_associated_SNPs_6968 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr6:130461619-130461645
64251 chr6 131520642 131520642 1 + G C rs34221901 131520650 + 131520630 131520670 41 GGCATCCTGGTAGGAGAGAGCAGAAGTTTTAAACCTCATTT GGCATCCTGGTACGAGAGAGCAGAAGTTTTAAACCTCATTT < 41bp 1 0.784082213867463 1 0.404330909252167 experiment 0.431835572265073 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP7 ENSG00000118507 CDS Human protein_coding chr6:131520650 chr6:131520642 nonsynonymous SNV 0.979 1 13 hm5C_associated_SNPs_6969 0 0 1 DGCR8 POSTAR2 ENCODE chr6:131520638-131520679
64251 chr6 131520655 131520655 1 + G A rs1190788 131520650 + 131520630 131520670 41 GGCATCCTGGTAGGAGAGAGCAGAAGTTTTAAACCTCATTT GGCATCCTGGTAGGAGAGAGCAGAAATTTTAAACCTCATTT < 41bp 1 0.760773414415893 1 0.383245855569839 experiment 0.478453171168214 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP7 ENSG00000118507 CDS Human protein_coding chr6:131520650 chr6:131520655 nonsynonymous SNV 0.996 0 26 hm5C_associated_SNPs_6970 0 0 1 DGCR8 POSTAR2 ENCODE chr6:131520638-131520679
64251 chr6 131904574 131904574 1 + G A rs182650447 131904583 + 131904563 131904603 41 GCACACCAGTCGTGGGAGGTCTGACATACAGAGAAGGTCTC GCACACCAGTCATGGGAGGTCTGACATACAGAGAAGGTCTC < 41bp 1 0.442852274352552 1 0.220117837190628 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARG1 ENSG00000118520 CDS Human protein_coding chr6:131904583 chr6:131904574 nonsynonymous SNV 0.470 1 12 hm5C_associated_SNPs_6971 0 0 1 PPIG POSTAR2 ENCODE chr6:131904520-131904598
64251 chr6 132211747 132211747 1 + C A rs147396850 132211762 + 132211742 132211782 41 ACTGTCGACCAGAGTTAGAACGGAGCCCTCGGTGATGCGGA ACTGTAGACCAGAGTTAGAACGGAGCCCTCGGTGATGCGGA < 41bp 1 0.662336903214753 1 0.769708514213562 experiment 0.675326193570494 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENPP1 ENSG00000197594 UTR3 Human protein_coding chr6:132211762 chr6:132211747 . . 0 6 hm5C_associated_SNPs_6972 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:132211705-132211753
64251 chr6 132211763 132211763 1 + G A rs1044548 132211762 + 132211742 132211782 41 ACTGTCGACCAGAGTTAGAACGGAGCCCTCGGTGATGCGGA ACTGTCGACCAGAGTTAGAACAGAGCCCTCGGTGATGCGGA < 41bp 1 0.608968772999951 1 0.525083899497986 experiment 0.782062454000099 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENPP1 ENSG00000197594 UTR3 Human protein_coding chr6:132211762 chr6:132211763 . . 0 22 hm5C_associated_SNPs_6973 2 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:132211745-132211771
64251 chr6 132211772 132211772 1 + G A rs11964389 132211762 + 132211742 132211782 41 ACTGTCGACCAGAGTTAGAACGGAGCCCTCGGTGATGCGGA ACTGTCGACCAGAGTTAGAACGGAGCCCTCAGTGATGCGGA < 41bp 1 0.686415357298933 1 0.681297719478607 experiment 0.627169285402134 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENPP1 ENSG00000197594 UTR3 Human protein_coding chr6:132211762 chr6:132211772 . . 0 31 hm5C_associated_SNPs_6974 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:132211751-132211792
64251 chr6 133135710 133135710 1 + C G rs562408306 133135725 + 133135705 133135745 41 GGCCTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAG GGCCTGTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAG < 41bp 1 0.501304620424664 1 0.653038620948792 experiment 0.997390759150672 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS12 ENSG00000112306 UTR5 Human protein_coding chr6:133135725 chr6:133135710 . . 0 6 hm5C_associated_SNPs_6975 0 0 24 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:133135700-133135720
64251 chr6 133135737 133135737 1 + G C rs562249470 133135725 + 133135705 133135745 41 GGCCTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAG GGCCTCTTTCCCTGCCGCCGCCGAGTCGCGCGCAGGCGGAG < 41bp 1 0.485316675055383 1 0.74211049079895 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS12 ENSG00000112306 UTR5 Human protein_coding chr6:133135725 chr6:133135737 . . 0 33 hm5C_associated_SNPs_6976 0 0 13 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr6:133135720-133135740
64251 chr6 133135884 133135884 1 + C G rs542049814 133135887 + 133135867 133135907 41 TTAGTGCGTTCAAGATTCAACTTCACCCGTAACCCACCGCC TTAGTGCGTTCAAGATTGAACTTCACCCGTAACCCACCGCC < 41bp 1 0.540910400555574 1 0.119156360626221 experiment 0.918179198888851 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 UTR5 Human protein_coding chr6:133135887 chr6:133135884 . . 0 18 hm5C_associated_SNPs_6977 0 0 54 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133135820-133135900
64251 chr6 133135886 133135886 1 + A C rs9483504 133135887 + 133135867 133135907 41 TTAGTGCGTTCAAGATTCAACTTCACCCGTAACCCACCGCC TTAGTGCGTTCAAGATTCACCTTCACCCGTAACCCACCGCC < 41bp 1 0.539335768670842 1 0.137883871793747 experiment 0.921328462658316 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 UTR5 Human protein_coding chr6:133135887 chr6:133135886 . . 0 20 hm5C_associated_SNPs_6978 0 0 53 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133135820-133135900
64251 chr6 133136475 133136475 1 + C T rs114497802 133136469 + 133136449 133136489 41 TGAATGATGACTTTAATTGTCGGATACCCCTTCACTCCTTT TGAATGATGACTTTAATTGTCGGATATCCCTTCACTCCTTT < 41bp 1 0.356665549484094 1 0.155121177434921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD101 ENSG00000206754 ncRNA_exonic Human snoRNA chr6:133136469 chr6:133136475 . . 0 27 hm5C_associated_SNPs_6979 0 0 149 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:133136467-133136494
64251 chr6 133136475 133136475 1 + C T rs114497802 133136477 + 133136457 133136497 41 GACTTTAATTGTCGGATACCCCTTCACTCCTTTTATGAGTG GACTTTAATTGTCGGATATCCCTTCACTCCTTTTATGAGTG < 41bp 1 0.0171738075905762 1 0.123581975698471 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD101 ENSG00000206754 ncRNA_exonic Human snoRNA chr6:133136477 chr6:133136475 . . 0 19 hm5C_associated_SNPs_6980 0 0 149 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:133136467-133136494
64251 chr6 133136475 133136475 1 + C T rs114497802 133136478 + 133136458 133136498 41 ACTTTAATTGTCGGATACCCCTTCACTCCTTTTATGAGTGA ACTTTAATTGTCGGATATCCCTTCACTCCTTTTATGAGTGA < 41bp 1 0.511434776380044 1 0.595292687416077 experiment 0.977130447239912 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD101 ENSG00000206754 ncRNA_exonic Human snoRNA chr6:133136478 chr6:133136475 . . 0 18 hm5C_associated_SNPs_6981 0 0 149 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:133136467-133136494
64251 chr6 133136475 133136475 1 + C T rs114497802 133136483 + 133136463 133136503 41 AATTGTCGGATACCCCTTCACTCCTTTTATGAGTGAAACAT AATTGTCGGATATCCCTTCACTCCTTTTATGAGTGAAACAT < 41bp 1 0.271634306988975 1 0.246878772974014 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD101 ENSG00000206754 ncRNA_exonic Human snoRNA chr6:133136483 chr6:133136475 . . 0 13 hm5C_associated_SNPs_6982 0 0 149 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:133136467-133136494
64251 chr6 133136475 133136475 1 + C T rs114497802 133136485 + 133136465 133136505 41 TTGTCGGATACCCCTTCACTCCTTTTATGAGTGAAACATAA TTGTCGGATATCCCTTCACTCCTTTTATGAGTGAAACATAA < 41bp 1 0.0331284184139201 1 0.0679949820041656 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD101 ENSG00000206754 ncRNA_exonic Human snoRNA chr6:133136485 chr6:133136475 . . 0 11 hm5C_associated_SNPs_6983 0 0 149 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:133136467-133136494
64251 chr6 133138002 133138002 1 + C T rs144823017 133137990 + 133137970 133138010 41 ACTGAACTGCCATGAGGAAACTGCCATGTCACCCTTCTGAT ACTGAACTGCCATGAGGAAACTGCCATGTCACTCTTCTGAT < 41bp 1 0.666724184855329 1 0.181681275367737 experiment 0.666551630289341 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133137990 chr6:133138002 . . 0 33 hm5C_associated_SNPs_6984 0 0 36 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138002 133138002 1 + C T rs144823017 133138001 + 133137981 133138021 41 ATGAGGAAACTGCCATGTCACCCTTCTGATTACAGCCACCT ATGAGGAAACTGCCATGTCACTCTTCTGATTACAGCCACCT < 41bp 1 0.324042853191577 1 0.0182510018348694 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133138001 chr6:133138002 . . 0 22 hm5C_associated_SNPs_6985 0 0 36 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138002 133138002 1 + C T rs144823017 133138006 + 133137986 133138026 41 GAAACTGCCATGTCACCCTTCTGATTACAGCCACCTTTTGG GAAACTGCCATGTCACTCTTCTGATTACAGCCACCTTTTGG < 41bp 1 0.368057976644514 1 0.0454201698303223 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133138006 chr6:133138002 . . 0 17 hm5C_associated_SNPs_6986 0 0 36 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138010 133138010 1 + T C rs9389034 133137990 + 133137970 133138010 41 ACTGAACTGCCATGAGGAAACTGCCATGTCACCCTTCTGAT ACTGAACTGCCATGAGGAAACTGCCATGTCACCCTTCTGAC < 41bp 1 0.687298680273006 1 0.300259232521057 experiment 0.625402639453988 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133137990 chr6:133138010 . . 0 41 hm5C_associated_SNPs_6987 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138010 133138010 1 + T C rs9389034 133138001 + 133137981 133138021 41 ATGAGGAAACTGCCATGTCACCCTTCTGATTACAGCCACCT ATGAGGAAACTGCCATGTCACCCTTCTGACTACAGCCACCT < 41bp 1 0.191983221282009 1 0.00831890106201172 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133138001 chr6:133138010 . . 0 30 hm5C_associated_SNPs_6988 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138010 133138010 1 + T C rs9389034 133138006 + 133137986 133138026 41 GAAACTGCCATGTCACCCTTCTGATTACAGCCACCTTTTGG GAAACTGCCATGTCACCCTTCTGACTACAGCCACCTTTTGG < 41bp 1 0.269301904693826 1 0.0728597342967987 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD100 ENSG00000221500 ncRNA_exonic Human snoRNA chr6:133138006 chr6:133138010 . . 0 25 hm5C_associated_SNPs_6989 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:133137674-133138018
64251 chr6 133138429 133138429 1 + C G rs115580799 133138418 + 133138398 133138438 41 AGACATACTTTAAAAACTGGCAATAGTAAAGCCATGTTACG AGACATACTTTAAAAACTGGCAATAGTAAAGGCATGTTACG < 41bp 1 0.588440684452277 1 0.101142644882202 experiment 0.823118631095447 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA33 ENSG00000200534 ncRNA_exonic Human snoRNA chr6:133138418 chr6:133138429 . . 0 32 hm5C_associated_SNPs_6990 0 0 48 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133138340-133138480
64251 chr6 133138429 133138429 1 + C G rs115580799 133138441 + 133138421 133138461 41 TAGTAAAGCCATGTTACGAGCCTTAAGGACATTGAAGTCGT TAGTAAAGGCATGTTACGAGCCTTAAGGACATTGAAGTCGT < 41bp 1 0.241795921390194 1 0.123777061700821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA33 ENSG00000200534 ncRNA_exonic Human snoRNA chr6:133138441 chr6:133138429 . . 0 9 hm5C_associated_SNPs_6991 0 0 48 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133138340-133138480
64251 chr6 133138429 133138429 1 + C G rs115580799 133138442 + 133138422 133138462 41 AGTAAAGCCATGTTACGAGCCTTAAGGACATTGAAGTCGTT AGTAAAGGCATGTTACGAGCCTTAAGGACATTGAAGTCGTT < 41bp 1 0.455311375571573 1 0.432725369930267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA33 ENSG00000200534 ncRNA_exonic Human snoRNA chr6:133138442 chr6:133138429 . . 0 8 hm5C_associated_SNPs_6992 0 0 48 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133138340-133138480
64251 chr6 133138484 133138484 1 + A G rs139120707 133138468 + 133138448 133138488 41 GACATTGAAGTCGTTAAGGTCCCTGAGAATGGCTATAACAA GACATTGAAGTCGTTAAGGTCCCTGAGAATGGCTATGACAA < 41bp 1 0.36494743485351 1 0.06863933801651 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA33 ENSG00000200534 ncRNA_exonic Human snoRNA chr6:133138468 chr6:133138484 . . 0 37 hm5C_associated_SNPs_6993 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr6:133138399-133138487
64251 chr6 133138484 133138484 1 + A G rs139120707 133138470 + 133138450 133138490 41 CATTGAAGTCGTTAAGGTCCCTGAGAATGGCTATAACAAAT CATTGAAGTCGTTAAGGTCCCTGAGAATGGCTATGACAAAT < 41bp 1 0.707356188729008 1 0.154753029346466 experiment 0.585287622541983 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA33 ENSG00000200534 ncRNA_exonic Human snoRNA chr6:133138470 chr6:133138484 . . 0 35 hm5C_associated_SNPs_6994 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr6:133138399-133138487
64251 chr6 138658392 138658392 1 + A G rs142475183 138658399 + 138658379 138658419 41 ATTGTCAAGAGACATAAGACCGACCAGCCACCCTGGCTGTT ATTGTCAAGAGACGTAAGACCGACCAGCCACCCTGGCTGTT < 41bp 1 0.201957774804064 1 0.119373917579651 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARFGEF3 ENSG00000112379 UTR3 Human protein_coding chr6:138658399 chr6:138658392 . . 0 14 hm5C_associated_SNPs_7001 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:138658391-138658392
64251 chr6 138725497 138725497 1 + G A rs11545805 138725500 + 138725480 138725520 41 GTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGG GTGGGCTCGGGTCTCCAACCCGGCCGGGAGGAGGGACCGGG < 41bp 1 0.776709373270253 1 0.425370842218399 experiment 0.446581253459494 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HEBP2 ENSG00000051620 UTR5 Human protein_coding chr6:138725500 chr6:138725497 . . 0 18 hm5C_associated_SNPs_7015 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr6:138725473-138725518
64251 chr6 138725520 138725520 1 + G C rs148419987 138725500 + 138725480 138725520 41 GTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGG GTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGGACCGGC < 41bp 1 0.758565229679903 1 0.254639029502869 experiment 0.482869540640194 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HEBP2 ENSG00000051620 UTR5 Human protein_coding chr6:138725500 chr6:138725520 . . 0 41 hm5C_associated_SNPs_7016 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:138725520-138725540
64251 chr6 138727166 138727166 1 + T G rs140459982 138727165 + 138727145 138727185 41 CGTGGAGCCTGGTTCAGGTCCTTTTAGTGAGTCTACCATTA CGTGGAGCCTGGTTCAGGTCCGTTTAGTGAGTCTACCATTA < 41bp 1 0.111663812360023 1 0.0329959392547607 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138727165 chr6:138727166 synonymous SNV . 0 22 hm5C_associated_SNPs_7017 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:138727138-138727176
64251 chr6 139114113 139114113 1 + A G rs6570282 139114114 + 139114094 139114134 41 ATGTGACTCGCTGTAATTCACCATAACTGGAGGCCTAGGCC ATGTGACTCGCTGTAATTCGCCATAACTGGAGGCCTAGGCC < 41bp 1 0.448731549396602 1 0.281993746757507 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC28A ENSG00000024862 UTR3 Human protein_coding chr6:139114114 chr6:139114113 . . 0 20 hm5C_associated_SNPs_7018 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr6:139114102-139114123
64251 chr6 143999140 143999140 1 + C G rs577688993 143999136 + 143999116 143999156 41 ATCCGCCGCGCCGGCTGCGGCCGGCCGGGCTGGGAGACCCG ATCCGCCGCGCCGGCTGCGGCCGGGCGGGCTGGGAGACCCG < 41bp 1 0.595129177572158 1 0.50753527879715 experiment 0.809741644855684 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHACTR2 ENSG00000112419 UTR5 Human protein_coding chr6:143999136 chr6:143999140 . . 0 25 hm5C_associated_SNPs_7019 0 0 5 DDX3X POSTAR2 ENCODE chr6:143999117-143999205
64251 chr6 144782354 144782354 1 + A G rs147576440 144782344 + 144782324 144782364 41 AATAAACAGAACTGAAGGGCCAACCTGGACATGCATATCTG AATAAACAGAACTGAAGGGCCAACCTGGACGTGCATATCTG < 41bp 1 0.035389626743096 1 0.165154159069061 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144782344 chr6:144782354 nonsynonymous SNV 0.200 0 31 hm5C_associated_SNPs_7020 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:144782335-144782373
64251 chr6 144876008 144876008 1 + C T rs78815593 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACTAAA < 41bp 1 0.209443916224626 1 0.266138195991516 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144876008 synonymous SNV . 0 38 hm5C_associated_SNPs_7021 0 0 1 GRWD1 POSTAR2 ENCODE chr6:144875978-144876011
64251 chr6 145503887 145503887 1 + G A rs147771222 145503885 + 145503865 145503905 41 ATGGTGTAATGGTTAGCACTCTGGGCTTTGAATCCAGCAAT ATGGTGTAATGGTTAGCACTCTAGGCTTTGAATCCAGCAAT < 41bp 1 0.519921193496118 1 0.630822360515594 experiment 0.960157613007763 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503885 chr6:145503887 . . 0 23 hm5C_associated_SNPs_7022 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:145503855-145503894
64251 chr6 145503887 145503887 1 + G A rs147771222 145503899 + 145503879 145503919 41 AGCACTCTGGGCTTTGAATCCAGCAATCCGAGTTCGAATCT AGCACTCTAGGCTTTGAATCCAGCAATCCGAGTTCGAATCT < 41bp 1 0.672302395910581 1 0.393202483654022 experiment 0.655395208178837 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503899 chr6:145503887 . . 0 9 hm5C_associated_SNPs_7023 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:145503855-145503894
64251 chr6 145503887 145503887 1 + G A rs147771222 145503902 + 145503882 145503922 41 ACTCTGGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGG ACTCTAGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGG < 41bp 1 0.0426778749966129 1 0.0819218456745148 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503902 chr6:145503887 . . 0 6 hm5C_associated_SNPs_7024 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:145503855-145503894
64251 chr6 145503887 145503887 1 + G A rs147771222 145503906 + 145503886 145503926 41 TGGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGG TAGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGG < 41bp 1 0.374959269361906 1 0.914850056171417 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503906 chr6:145503887 . . 0 2 hm5C_associated_SNPs_7025 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:145503855-145503894
64251 chr6 145503887 145503887 1 + G A rs147771222 145503907 + 145503887 145503927 41 GGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGGA AGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGGA < 41bp 1 0.273043058720446 1 0.467579066753387 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503907 chr6:145503887 . . 0 1 hm5C_associated_SNPs_7026 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr6:145503855-145503894
64251 chr6 145503907 145503907 1 + C G rs117561287 145503899 + 145503879 145503919 41 AGCACTCTGGGCTTTGAATCCAGCAATCCGAGTTCGAATCT AGCACTCTGGGCTTTGAATCCAGCAATCGGAGTTCGAATCT < 41bp 1 0.728858011142842 1 0.287892162799835 experiment 0.542283977714316 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503899 chr6:145503907 . . 0 29 hm5C_associated_SNPs_7027 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:145503894-145503927
64251 chr6 145503907 145503907 1 + C G rs117561287 145503902 + 145503882 145503922 41 ACTCTGGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGG ACTCTGGGCTTTGAATCCAGCAATCGGAGTTCGAATCTTGG < 41bp 1 0.0674559602682656 1 0.0803972780704498 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503902 chr6:145503907 . . 0 26 hm5C_associated_SNPs_7028 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:145503894-145503927
64251 chr6 145503907 145503907 1 + C G rs117561287 145503906 + 145503886 145503926 41 TGGGCTTTGAATCCAGCAATCCGAGTTCGAATCTTGGTGGG TGGGCTTTGAATCCAGCAATCGGAGTTCGAATCTTGGTGGG < 41bp 1 0.711006339547715 1 0.975162744522095 experiment 0.577987320904571 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target UTRN;EPM2A ENSG00000152818;ENSG00000221796 intergenic Human other chr6:145503906 chr6:145503907 . . 0 22 hm5C_associated_SNPs_7029 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:145503894-145503927
64251 chr6 148865771 148865771 1 + A G rs61996300 148865756 + 148865736 148865776 41 CTCTCAGGGCAGGCGCCTGGCAGCCCACCAAGCACAAGGCC CTCTCAGGGCAGGCGCCTGGCAGCCCACCAAGCACGAGGCC < 41bp 1 0.426871497433461 1 0.473089665174484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865756 chr6:148865771 synonymous SNV . 0 36 hm5C_associated_SNPs_7031 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:148865771-148865834
64251 chr6 148865771 148865771 1 + A G rs61996300 148865775 + 148865755 148865795 41 GCAGCCCACCAAGCACAAGGCCGCCCCCCTGGCTCTCAGAG GCAGCCCACCAAGCACGAGGCCGCCCCCCTGGCTCTCAGAG < 41bp 1 0.0873318851200787 1 0.0666749775409698 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865775 chr6:148865771 synonymous SNV . 0 17 hm5C_associated_SNPs_7032 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:148865771-148865834
64251 chr6 149731747 149731747 1 + A G rs578100209 149731745 + 149731725 149731765 41 TACTTTGCCCTCATGAGTTCCAATGTTGTGTGAAGACAGGC TACTTTGCCCTCATGAGTTCCAGTGTTGTGTGAAGACAGGC < 41bp 1 0.243333816989139 1 0.136009931564331 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAB2 ENSG00000055208 UTR3 Human protein_coding chr6:149731745 chr6:149731747 . . 0 23 hm5C_associated_SNPs_7033 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:149731739-149731770
64251 chr6 149915654 149915654 1 + T A rs9765961 149915636 + 149915616 149915656 41 AGGCCAGCACACCAAGACCACAGGCTGCCGTGGCCGCATCG AGGCCAGCACACCAAGACCACAGGCTGCCGTGGCCGCAACG < 41bp 1 0.779858671826706 1 0.63327693939209 experiment 0.440282656346588 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS18P9 ENSG00000220848 ncRNA_exonic Human processed_pseudogene chr6:149915636 chr6:149915654 . . 0 39 hm5C_associated_SNPs_7036 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:149915651-149915738
64251 chr6 150131820 150131820 1 + C T rs77141358 150131808 + 150131788 150131828 41 TAAAATTACAGTGGATTGCTCATCTCAGTCCTCAAAGCTTT TAAAATTACAGTGGATTGCTCATCTCAGTCCTTAAAGCTTT < 41bp 1 0.146055284064568 1 0.0587822794914246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCMT1 ENSG00000120265 UTR3 Human protein_coding chr6:150131808 chr6:150131820 . . 0 33 hm5C_associated_SNPs_7037 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:150131757-150131930
64251 chr6 151186866 151186866 1 + G C rs191863790 151186861 + 151186841 151186881 41 GAAGCGCCAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCG GAAGCGCCAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCG < 41bp 1 0.368824484695681 1 0.132445901632309 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186861 chr6:151186866 . . 0 26 hm5C_associated_SNPs_7038 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186862 + 151186842 151186882 41 AAGCGCCAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGC AAGCGCCAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGC < 41bp 1 0.498616126324407 1 0.779989302158356 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186862 chr6:151186866 . . 0 25 hm5C_associated_SNPs_7039 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186864 + 151186844 151186884 41 GCGCCAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCT GCGCCAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCT < 41bp 1 0.341547987621974 1 0.105486422777176 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186864 chr6:151186866 . . 0 23 hm5C_associated_SNPs_7040 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186865 + 151186845 151186885 41 CGCCAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTG CGCCAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTG < 41bp 1 0.478379380446014 1 0.294333398342133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186865 chr6:151186866 . . 0 22 hm5C_associated_SNPs_7041 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186867 + 151186847 151186887 41 CCAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCT CCAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCT < 41bp 1 0.374849678317926 1 0.199147552251816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186867 chr6:151186866 . . 0 20 hm5C_associated_SNPs_7042 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186868 + 151186848 151186888 41 CAGGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTC CAGGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTC < 41bp 1 0.730201549290858 1 0.499551355838776 experiment 0.539596901418283 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186868 chr6:151186866 . . 0 19 hm5C_associated_SNPs_7043 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186870 + 151186850 151186890 41 GGTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCC GGTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCC < 41bp 1 0.495739252452064 1 0.25918585062027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186870 chr6:151186866 . . 0 17 hm5C_associated_SNPs_7044 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186871 + 151186851 151186891 41 GTCCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCC GTCCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCC < 41bp 1 0.708092870197416 1 0.538483738899231 experiment 0.583814259605168 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186871 chr6:151186866 . . 0 16 hm5C_associated_SNPs_7045 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186873 + 151186853 151186893 41 CCTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTG CCTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTG < 41bp 1 0.559607274828337 1 0.297733247280121 experiment 0.880785450343326 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186873 chr6:151186866 . . 0 14 hm5C_associated_SNPs_7046 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186874 + 151186854 151186894 41 CTTCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTGG CTTCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTGG < 41bp 1 0.778579911792098 1 0.576454699039459 experiment 0.442840176415803 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186874 chr6:151186866 . . 0 13 hm5C_associated_SNPs_7047 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186876 + 151186856 151186896 41 TCCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTGGCA TCCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTGGCA < 41bp 1 0.445871938639487 1 0.269491761922836 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186876 chr6:151186866 . . 0 11 hm5C_associated_SNPs_7048 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186877 + 151186857 151186897 41 CCCGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTGGCAC CCCGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTGGCAC < 41bp 1 0.696073131666808 1 0.708427846431732 experiment 0.607853736666383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186877 chr6:151186866 . . 0 10 hm5C_associated_SNPs_7049 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186879 + 151186859 151186899 41 CGCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTGGCACGC CGCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTGGCACGC < 41bp 1 0.369723069592713 1 0.659254670143127 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186879 chr6:151186866 . . 0 8 hm5C_associated_SNPs_7050 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151186866 151186866 1 + G C rs191863790 151186880 + 151186860 151186900 41 GCCGCCGCCGCCGCCGCCGCCGCCTGCTCCCCTGGCACGCG GCCGCCCCCGCCGCCGCCGCCGCCTGCTCCCCTGGCACGCG < 41bp 1 0.635937672275411 1 0.704495370388031 experiment 0.728124655449178 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1L ENSG00000120254 UTR5 Human protein_coding chr6:151186880 chr6:151186866 . . 0 7 hm5C_associated_SNPs_7051 0 0 4 DGCR8 POSTAR2 ENCODE chr6:151186853-151186906
64251 chr6 151413717 151413717 1 + G A rs11558820 151413707 + 151413687 151413727 41 TTCTAAGTGGACAAGGCTCTCACAGGACCCGATGCAGGTAG TTCTAAGTGGACAAGGCTCTCACAGGACCCAATGCAGGTAG < 41bp 1 0.733039467073265 1 0.276128232479095 experiment 0.533921065853469 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTHFD1L ENSG00000223598 ncRNA_intronic Human antisense chr6:151413707 chr6:151413717 . . 0 31 hm5C_associated_SNPs_7052 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151413686-151413718
64251 chr6 151677474 151677474 1 + A G rs78766610 151677467 + 151677447 151677487 41 CTCTGAAATTGGTCACTTTCCTATTACACGGAGTGTGCTAA CTCTGAAATTGGTCACTTTCCTATTACGCGGAGTGTGCTAA < 41bp 1 0.0931643547800167 1 0.0861289203166962 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP12 ENSG00000131016 UTR3 Human protein_coding chr6:151677467 chr6:151677474 . . 0 28 hm5C_associated_SNPs_7053 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151677367-151677510
64251 chr6 155129280 155129280 1 + A T rs140506252 155129276 + 155129256 155129296 41 CACCATCACAAGGGAGTAGTCAGCAGCATTTTCTTGAACCT CACCATCACAAGGGAGTAGTCAGCTGCATTTTCTTGAACCT < 41bp 1 0.595113407646407 1 0.769823253154755 experiment 0.809773184707186 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155129276 chr6:155129280 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_7054 0 0 12 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:155129254-155129281
64251 chr6 155153307 155153307 1 + G A rs34802160 155153288 + 155153268 155153308 41 CTGGAATATTGGGAATACAGCCACCCAGTGTGTCAAATAGT CTGGAATATTGGGAATACAGCCACCCAGTGTGTCAAATAAT < 41bp 1 0.0301864920095614 1 0.0485503077507019 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155153288 chr6:155153307 nonsynonymous SNV 0.985 0 40 hm5C_associated_SNPs_7055 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:155153280-155153320
64251 chr6 157802916 157802916 1 + G C rs529370775 157802928 + 157802908 157802948 41 TTGTCGCCGAGCCGGGAGCCCGTGTAGGGGCCGCGGCGCCG TTGTCGCCCAGCCGGGAGCCCGTGTAGGGGCCGCGGCGCCG < 41bp 1 0.667522063852506 1 0.379152536392212 experiment 0.664955872294989 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZDHHC14 ENSG00000175048 UTR5 Human protein_coding chr6:157802928 chr6:157802916 . . 0 9 hm5C_associated_SNPs_7056 0 0 4 CSTF2T POSTAR2 ENCODE chr6:157802906-157803025
64251 chr6 158364714 158364714 1 + A G rs1043863 158364712 + 158364692 158364732 41 GAGAATTTTGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGC GAGAATTTTGTGGCTTTGGTCCGACGGGTGAGTGGCTGTGC < 41bp 1 0.286023394340242 1 0.727732598781586 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158364712 chr6:158364714 . . 0 23 hm5C_associated_SNPs_7057 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:158364670-158364714
64251 chr6 158364714 158364714 1 + A G rs1043863 158364713 + 158364693 158364733 41 AGAATTTTGTGGCTTTGGTCCAACGGGTGAGTGGCTGTGCG AGAATTTTGTGGCTTTGGTCCGACGGGTGAGTGGCTGTGCG < 41bp 1 0.575192757648762 1 0.742985308170319 experiment 0.849614484702475 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158364713 chr6:158364714 . . 0 22 hm5C_associated_SNPs_7058 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:158364670-158364714
64251 chr6 158519816 158519816 1 + G A rs2477813 158519797 + 158519777 158519817 41 TATTTTGTTCCTGCTGTTCTCTAACATGGTGCAGTTCACGC TATTTTGTTCCTGCTGTTCTCTAACATGGTGCAGTTCACAC < 41bp 1 0.264736061964743 1 0.351698815822601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SYNJ2 ENSG00000078269 UTR3 Human protein_coding chr6:158519797 chr6:158519816 . . 0 40 hm5C_associated_SNPs_7059 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:158519810-158519850
64251 chr6 158870081 158870081 1 + A G rs705956 158870090 + 158870070 158870110 41 TGCCACGGCAGAATGCTGGCCCACGTCCTCTTGCACGAGTC TGCCACGGCAGGATGCTGGCCCACGTCCTCTTGCACGAGTC < 41bp 1 0.177871843855107 1 0.105227380990982 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158870090 chr6:158870081 synonymous SNV . 0 12 hm5C_associated_SNPs_7060 0 0 1 GRWD1 POSTAR2 ENCODE chr6:158870031-158870092
64251 chr6 160485839 160485839 1 + G A rs571049189 160485837 + 160485817 160485857 41 TGCCTCTTAACTTTTTTAGCCAGTATTTCTAAAGGAGACTT TGCCTCTTAACTTTTTTAGCCAATATTTCTAAAGGAGACTT < 41bp 1 0.0450426597751898 1 0.0787362456321716 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160485837 chr6:160485839 nonsynonymous SNV 0.329 3 23 hm5C_associated_SNPs_7061 0 0 4 EIF3H POSTAR2 ENCODE chr6:160485835-160485841
64251 chr6 160494409 160494409 1 + A G rs629849 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTGCAGGCCTGAGGCCGGGCCAACCAATAGGCCCAT < 41bp 1 0.386050489709849 1 0.908053994178772 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494409 nonsynonymous SNV 0.492 0 22 hm5C_associated_SNPs_7062 0 1 2 SND1 POSTAR2 ENCODE chr6:160494401-160494417
64251 chr6 160526686 160526686 1 + T C rs78039413 160526684 + 160526664 160526704 41 GTGTCCCCTGAGTTGGAGCTCATTCTGTCTCTTTTCTCTTT GTGTCCCCTGAGTTGGAGCTCACTCTGTCTCTTTTCTCTTT < 41bp 1 0.121135738863139 1 0.073687344789505 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control IGF2R ENSG00000197081 UTR3 Human protein_coding chr6:160526684 chr6:160526686 . . 0 23 hm5C_associated_SNPs_7063 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:160526648-160526701
64251 chr6 161510472 161510472 1 + C T rs202168620 161510492 + 161510472 161510512 41 CGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC TGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC < 41bp 1 0.687422588541174 1 0.525712907314301 experiment 0.625154822917653 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161510492 chr6:161510472 nonsynonymous SNV 0.994 3 1 hm5C_associated_SNPs_7064 0 0 6 FXR2 POSTAR2 ENCODE chr6:161510435-161510479
64251 chr6 161519331 161519331 1 + C T rs200257460 161519314 + 161519294 161519334 41 TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACGCG TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGATGCG < 41bp 1 0.70626505676845 1 0.940339207649231 experiment 0.5874698864631 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519314 chr6:161519331 synonymous SNV . 0 38 hm5C_associated_SNPs_7065 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:161519307-161519340
64251 chr6 168314939 168314939 1 + G A rs149079362 168314938 + 168314918 168314958 41 AGCAAGACCGAGACCTTAGTCGGATCACACTGGATGCTCAA AGCAAGACCGAGACCTTAGTCAGATCACACTGGATGCTCAA < 41bp 1 0.324134559758107 1 0.886480808258057 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168314938 chr6:168314939 nonsynonymous SNV 0.980 2 22 hm5C_associated_SNPs_7066 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:168314915-168314956
64251 chr6 168352330 168352330 1 + C T rs76831621 168352327 + 168352307 168352347 41 TGGTATGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCGGGA TGGTATGAGAAGGAGAAGGCCCGTCTGGAGGAGGAGCGGGA < 41bp 1 0.0494299079381158 1 0.159502625465393 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout AFDN ENSG00000130396 CDS Human protein_coding chr6:168352327 chr6:168352330 synonymous SNV . 0 24 hm5C_associated_SNPs_7067 0 0 16 BUD13 POSTAR2 ENCODE chr6:168352294-168352353
64251 chr6 168352445 168352445 1 + C A rs75845754 168352459 + 168352439 168352479 41 ATGAAGCCCGAAAAGCCTTCCACACTCCAGCGGCCACAGGA ATGAAGACCGAAAAGCCTTCCACACTCCAGCGGCCACAGGA < 41bp 1 0.15740830500801 1 0.0294184386730194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168352459 chr6:168352445 nonsynonymous SNV 0.473 1 7 hm5C_associated_SNPs_7068 0 0 6 BUD13 POSTAR2 ENCODE chr6:168352380-168352448
64251 chr6 168352447 168352447 1 + C G rs199757028 168352459 + 168352439 168352479 41 ATGAAGCCCGAAAAGCCTTCCACACTCCAGCGGCCACAGGA ATGAAGCCGGAAAAGCCTTCCACACTCCAGCGGCCACAGGA < 41bp 1 0.166734781625149 1 0.0513554513454437 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168352459 chr6:168352447 synonymous SNV . 0 9 hm5C_associated_SNPs_7069 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:168352447-168352448
64251 chr6 168363172 168363172 1 + G A rs141410347 168363160 + 168363140 168363180 41 CAGCAGTTAGAAGAGATGCGCAAGCGGGAAGCGGAAGACCG CAGCAGTTAGAAGAGATGCGCAAGCGGGAAGCAGAAGACCG < 41bp 1 0.299628767772108 1 0.437481880187988 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363160 chr6:168363172 synonymous SNV . 0 33 hm5C_associated_SNPs_7070 0 0 11 DDX24 POSTAR2 ENCODE chr6:168363160-168363198
64251 chr7 300423 300423 1 + G A rs550699777 300422 + 300402 300442 41 CTTTCTCCTTCCTGGGGCCTCGGCTCCTGGAGGGCTGGAGG CTTTCTCCTTCCTGGGGCCTCAGCTCCTGGAGGGCTGGAGG < 41bp 1 0.525046085357211 1 0.571439623832703 experiment 0.949907829285578 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM20C ENSG00000177706 UTR3 Human protein_coding chr7:300422 chr7:300423 . . 0 22 hm5C_associated_SNPs_7078 0 0 5 DDX3X POSTAR2 ENCODE chr7:300406-300474
64251 chr7 819695 819695 1 + A G rs61755909 819711 + 819691 819731 41 TCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT TCCTGCTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT < 41bp 1 0.157136086986258 1 0.209117233753204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819711 chr7:819695 nonsynonymous SNV 0.027 0 5 hm5C_associated_SNPs_7079 1 0 1 YBX3 POSTAR2 ENCODE chr7:819694-819742
64251 chr7 897492 897492 1 + A G rs10950789 897491 + 897471 897511 41 TGGTGAGCAGCTCCTGCCCACAGTCGAGCACCTCCAGCTGG TGGTGAGCAGCTCCTGCCCACGGTCGAGCACCTCCAGCTGG < 41bp 1 0.311421575820556 1 0.565121948719025 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:897491 chr7:897492 synonymous SNV . 0 22 hm5C_associated_SNPs_7080 0 0 13 BUD13 POSTAR2 ENCODE chr7:897412-897523
64251 chr7 897496 897496 1 + G A rs59910530 897491 + 897471 897511 41 TGGTGAGCAGCTCCTGCCCACAGTCGAGCACCTCCAGCTGG TGGTGAGCAGCTCCTGCCCACAGTCAAGCACCTCCAGCTGG < 41bp 1 0.212607986482081 1 0.44044092297554 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:897491 chr7:897496 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_7081 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:897496-897497
64251 chr7 930608 930608 1 + G A rs11543223 930607 + 930587 930627 41 GTATCATTTTCTGCACTCAGCGGACGGGGAGGGCTGTGCCA GTATCATTTTCTGCACTCAGCAGACGGGGAGGGCTGTGCCA < 41bp 1 0.411891772208325 1 0.690922856330872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GET4 ENSG00000239857 CDS Human protein_coding chr7:930607 chr7:930608 synonymous SNV . 0 22 hm5C_associated_SNPs_7082 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:930572-930610
64251 chr7 1126843 1126843 1 + C T rs556540795 1126863 + 1126843 1126883 41 CCCTGGTGGGGAAGAGGCCACCAACATCTGGACGGCAGGTA TCCTGGTGGGGAAGAGGCCACCAACATCTGGACGGCAGGTA < 41bp 1 0.0995395239553868 1 0.454395294189453 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPER1 ENSG00000164850 UTR5 Human protein_coding chr7:1126863 chr7:1126843 . . 0 1 hm5C_associated_SNPs_7084 0 0 2 GRWD1 POSTAR2 ENCODE chr7:1126811-1126911
64251 chr7 1126876 1126876 1 + G A rs10269151 1126863 + 1126843 1126883 41 CCCTGGTGGGGAAGAGGCCACCAACATCTGGACGGCAGGTA CCCTGGTGGGGAAGAGGCCACCAACATCTGGACAGCAGGTA < 41bp 1 0.0925816295466481 1 0.355671226978302 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPER1 ENSG00000164850 UTR5 Human protein_coding chr7:1126863 chr7:1126876 . . 0 34 hm5C_associated_SNPs_7085 0 0 2 GRWD1 POSTAR2 ENCODE chr7:1126811-1126911
64251 chr7 1582595 1582595 1 + G A rs548143137 1582600 + 1582580 1582620 41 CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGT CCCTGCCCCGTCCCTACGGCCACCACCTAATTTATTGCCGT < 41bp 1 0.421063116771239 1 0.474150121212006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAFK;TMEM184A ENSG00000164855;ENSG00000198517 UTR3 Human other chr7:1582600 chr7:1582595 . . 0 16 hm5C_associated_SNPs_7086 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:1582583-1582652
64251 chr7 1582604 1582604 1 + A G rs1044529 1582600 + 1582580 1582620 41 CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGT CCCTGCCCCGTCCCTGCGGCCACCGCCTAATTTATTGCCGT < 41bp 1 0.334252565429889 1 0.420270949602127 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAFK;TMEM184A ENSG00000164855;ENSG00000198517 UTR3 Human other chr7:1582600 chr7:1582604 . . 0 25 hm5C_associated_SNPs_7087 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:1582600-1582620
64251 chr7 1582619 1582619 1 + G A rs532461313 1582600 + 1582580 1582620 41 CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCGT CCCTGCCCCGTCCCTGCGGCCACCACCTAATTTATTGCCAT < 41bp 1 0.446268610263037 1 0.540032744407654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAFK;TMEM184A ENSG00000164855;ENSG00000198517 UTR3 Human other chr7:1582600 chr7:1582619 . . 0 40 hm5C_associated_SNPs_7088 0 0 15 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:1582600-1582620
64251 chr7 2290668 2290668 1 + C G rs141118084 2290655 + 2290635 2290675 41 AGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGACGTGGCTG AGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGAGGTGGCTG < 41bp 1 0.682511711946079 1 0.419258862733841 experiment 0.634976576107843 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 UTR3 Human protein_coding chr7:2290655 chr7:2290668 . . 0 34 hm5C_associated_SNPs_7089 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr7 2290672 2290672 1 + G T rs35573651 2290655 + 2290635 2290675 41 AGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGACGTGGCTG AGCGGGAGCCCAGGGCAGCCCCTGGGCAGGAGACGTGTCTG < 41bp 1 0.681069593070925 1 0.493078917264938 experiment 0.637860813858151 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 UTR3 Human protein_coding chr7:2290655 chr7:2290672 . . 0 38 hm5C_associated_SNPs_7090 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr7 2394934 2394934 1 + G C rs185762794 2394930 + 2394910 2394950 41 CAGCCGGGCCCAGGCGGTGTCCGAGGACGCGGGAGGAAACG CAGCCGGGCCCAGGCGGTGTCCGACGACGCGGGAGGAAACG < 41bp 1 0.337266109071425 1 0.357235491275787 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394930 chr7:2394934 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_7091 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:2394920-2394940
64251 chr7 2394991 2394991 1 + C T rs11551167 2394994 + 2394974 2395014 41 CCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCCCTCCTT CCCCGGGCGCTGGAGAATGGCGACGCGGACGAGCCCTCCTT < 41bp 1 0.768519276117894 1 0.699083626270294 experiment 0.462961447764212 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394994 chr7:2394991 synonymous SNV . 0 18 hm5C_associated_SNPs_7092 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2394972-2394992
64251 chr7 2394991 2394991 1 + C T rs11551167 2395007 + 2394987 2395027 41 AGAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAG AGAATGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAG < 41bp 1 0.082302031001101 1 0.171684801578522 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395007 chr7:2394991 synonymous SNV . 0 5 hm5C_associated_SNPs_7093 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2394972-2394992
64251 chr7 2394991 2394991 1 + C T rs11551167 2395008 + 2394988 2395028 41 GAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGG GAATGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGG < 41bp 1 0.150058911745432 1 0.114636063575745 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395008 chr7:2394991 synonymous SNV . 0 4 hm5C_associated_SNPs_7094 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2394972-2394992
64251 chr7 2394991 2394991 1 + C T rs11551167 2395011 + 2394991 2395031 41 CGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACT TGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACT < 41bp 1 0.0762396618268052 1 0.140939384698868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395011 chr7:2394991 synonymous SNV . 0 1 hm5C_associated_SNPs_7095 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2394972-2394992
64251 chr7 2395008 2395008 1 + C T rs545964398 2394994 + 2394974 2395014 41 CCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCCCTCCTT CCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCTCTCCTT < 41bp 1 0.677243754024285 1 0.588987827301025 experiment 0.645512491951429 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394994 chr7:2395008 nonsynonymous SNV 0.946 1 35 hm5C_associated_SNPs_7096 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395008 2395008 1 + C T rs545964398 2395007 + 2394987 2395027 41 AGAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAG AGAACGGCGACGCGGACGAGCTCTCCTTCAGCGACCCCGAG < 41bp 1 0.194585502259223 1 0.193403035402298 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395007 chr7:2395008 nonsynonymous SNV 0.946 1 22 hm5C_associated_SNPs_7097 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395008 2395008 1 + C T rs545964398 2395011 + 2394991 2395031 41 CGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACT CGGCGACGCGGACGAGCTCTCCTTCAGCGACCCCGAGGACT < 41bp 1 0.10454492773572 1 0.0852477252483368 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395011 chr7:2395008 nonsynonymous SNV 0.946 1 18 hm5C_associated_SNPs_7098 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395008 2395008 1 + C T rs545964398 2395015 + 2394995 2395035 41 GACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACTTCGT GACGCGGACGAGCTCTCCTTCAGCGACCCCGAGGACTTCGT < 41bp 1 0.685753221459896 1 0.755803644657135 experiment 0.628493557080207 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395015 chr7:2395008 nonsynonymous SNV 0.946 1 14 hm5C_associated_SNPs_7099 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395008 2395008 1 + C T rs545964398 2395021 + 2395001 2395041 41 GACGAGCCCTCCTTCAGCGACCCCGAGGACTTCGTGGACGA GACGAGCTCTCCTTCAGCGACCCCGAGGACTTCGTGGACGA < 41bp 1 0.487912318300302 1 0.249700248241425 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395021 chr7:2395008 nonsynonymous SNV 0.946 1 8 hm5C_associated_SNPs_7100 0 0 25 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2411417 2411417 1 + T G rs77573843 2411420 + 2411400 2411440 41 TTTTTTAAACAGGGTGTTGTCACAAATTTTGAAATTTTCCG TTTTTTAAACAGGGTGTGGTCACAAATTTTGAAATTTTCCG < 41bp 1 0.535887509191773 1 0.254317820072174 experiment 0.928224981616454 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2411420 chr7:2411417 synonymous SNV . 0 18 hm5C_associated_SNPs_7101 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:2411400-2411420
64251 chr7 2416565 2416565 1 + G A rs111701262 2416581 + 2416561 2416601 41 TGGTGTGTCCCTGCCCTGGCCTAGGTGGACAACGCGTACTG TGGTATGTCCCTGCCCTGGCCTAGGTGGACAACGCGTACTG < 41bp 1 0.546252573172069 1 0.554604768753052 experiment 0.907494853655863 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF3B ENSG00000106263 intronic Human protein_coding chr7:2416581 chr7:2416565 . . 0 5 hm5C_associated_SNPs_7102 0 0 6 SF3A3 POSTAR2 ENCODE chr7:2416510-2416606
64251 chr7 2419994 2419994 1 + C A rs530959610 2419977 + 2419957 2419997 41 CCGCGTGACTCCCGCCTCCTCCCTGTGCTCTCTGGCTCTGG CCGCGTGACTCCCGCCTCCTCCCTGTGCTCTCTGGCTATGG < 41bp 1 0.445308115572575 1 0.0962384641170502 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EIF3B ENSG00000106263 UTR3 Human protein_coding chr7:2419977 chr7:2419994 . . 0 38 hm5C_associated_SNPs_7103 0 0 37 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:2419923-2420041
64251 chr7 2472255 2472255 1 + C T rs200893373 2472246 + 2472226 2472266 41 GGAAGCTGAAGTGAGAGGCCCGGAGAGGGCCCAGCCCGCCC GGAAGCTGAAGTGAGAGGCCCGGAGAGGGTCCAGCCCGCCC < 41bp 1 0.739462600542563 1 0.623924493789673 experiment 0.521074798914874 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CHST12 ENSG00000136213 UTR5 Human protein_coding chr7:2472246 chr7:2472255 . . 0 30 hm5C_associated_SNPs_7104 0 0 3 DDX3X POSTAR2 ENCODE chr7:2472241-2472281
64251 chr7 2472409 2472409 1 + G A rs143942839 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACAGGGCCGCCGCTGCCCACGCCCGGGCCG < 41bp 1 0.432320653289023 1 0.0807695090770721 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472409 synonymous SNV . 0 14 hm5C_associated_SNPs_7105 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472429 2472429 1 + C A rs3735099 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCACGGGCCG < 41bp 1 0.462135200449816 1 0.137732088565826 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472429 nonsynonymous SNV 0.011 1 34 hm5C_associated_SNPs_7106 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472429 2472429 1 + C A rs3735099 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCCGCTGCCCACGCACGGGCCGGACAGGGACAGGGAGCTCA < 41bp 1 0.424900623615895 1 0.278276860713959 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472429 nonsynonymous SNV 0.011 1 15 hm5C_associated_SNPs_7107 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472452 2472452 1 + C T rs114841399 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGTTCA < 41bp 1 0.390689501596806 1 0.160686254501343 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472452 nonsynonymous SNV 0.004 0 38 hm5C_associated_SNPs_7108 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:2472451-2472452
64251 chr7 2686525 2686525 1 + C G rs148208032 2686507 + 2686487 2686527 41 GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCGC GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTGGC < 41bp 1 0.50647285587042 1 0.761405348777771 experiment 0.98705428825916 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686507 chr7:2686525 synonymous SNV . 0 39 hm5C_associated_SNPs_7110 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2686517-2686568
64251 chr7 2702350 2702350 1 + C G rs116694861 2702362 + 2702342 2702382 41 CTGTCCCCCCTTGGGACTAACCACTAACCTCACCCCCAAAC CTGTCCCCGCTTGGGACTAACCACTAACCTCACCCCCAAAC < 41bp 1 0.178383304114396 1 0.0428435802459717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702362 chr7:2702350 . . 0 9 hm5C_associated_SNPs_7111 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2702314-2702401
64251 chr7 2702939 2702939 1 + C G rs73281129 2702925 + 2702905 2702945 41 TTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCCGGCAGC TTTACAGACGCATGGCTCTTCCTCCCAGAGCAGCGGGCAGC < 41bp 1 0.0571140708881861 1 0.0249415636062622 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2702925 chr7:2702939 . . 0 35 hm5C_associated_SNPs_7112 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2702904-2702978
64251 chr7 2703247 2703247 1 + G A rs11546976 2703232 + 2703212 2703252 41 GCCAACCTGCCCAGTCTTTCCTCTGGGCTTGACCCGCCAGG GCCAACCTGCCCAGTCTTTCCTCTGGGCTTGACCCACCAGG < 41bp 1 0.489277288395857 1 0.595858335494995 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2703232 chr7:2703247 . . 0 36 hm5C_associated_SNPs_7113 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:2703242-2703276
64251 chr7 4306938 4306938 1 + C G rs151091785 4306918 + 4306898 4306938 41 CTCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTC CTCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTG < 41bp 1 0.0367850056002725 1 0.0634545087814331 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306918 chr7:4306938 . . 0 41 hm5C_associated_SNPs_7139 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306919 + 4306899 4306939 41 TCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCT TCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTGT < 41bp 1 0.1334945765821 1 0.183873414993286 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306919 chr7:4306938 . . 0 40 hm5C_associated_SNPs_7140 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306921 + 4306901 4306941 41 CCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTT CCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTT < 41bp 1 0.0124216560154074 1 0.169398784637451 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306921 chr7:4306938 . . 0 38 hm5C_associated_SNPs_7141 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306922 + 4306902 4306942 41 CTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTC CTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTC < 41bp 1 0.034724196993379 1 0.330037474632263 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306922 chr7:4306938 . . 0 37 hm5C_associated_SNPs_7142 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306925 + 4306905 4306945 41 CCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCT CCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCT < 41bp 1 0.00767749451655769 1 0.110429495573044 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306925 chr7:4306938 . . 0 34 hm5C_associated_SNPs_7143 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306926 + 4306906 4306946 41 CTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTC CTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTC < 41bp 1 0.0443472495449777 1 0.371735334396362 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306926 chr7:4306938 . . 0 33 hm5C_associated_SNPs_7144 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306929 + 4306909 4306949 41 CCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCT CCTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCT < 41bp 1 0.0241563492354953 1 0.207924336194992 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306929 chr7:4306938 . . 0 30 hm5C_associated_SNPs_7145 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306930 + 4306910 4306950 41 CTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTC CTCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTC < 41bp 1 0.0163605288021734 1 0.222016304731369 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306930 chr7:4306938 . . 0 29 hm5C_associated_SNPs_7146 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306931 + 4306911 4306951 41 TCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCC TCTCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTCC < 41bp 1 0.169962664432908 1 0.561684787273407 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306931 chr7:4306938 . . 0 28 hm5C_associated_SNPs_7147 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306933 + 4306913 4306953 41 TCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCT TCTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTCCCT < 41bp 1 0.05490519363783 1 0.0286920070648193 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306933 chr7:4306938 . . 0 26 hm5C_associated_SNPs_7148 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306934 + 4306914 4306954 41 CTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTT CTTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTCCCTT < 41bp 1 0.029981824559864 1 0.0246672332286835 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306934 chr7:4306938 . . 0 25 hm5C_associated_SNPs_7149 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306935 + 4306915 4306955 41 TTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTC TTTCCTCCTTCCTTCCCTCCCTTGTTTCCCTCCCTCCCTTC < 41bp 1 0.157305076756712 1 0.0273577868938446 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306935 chr7:4306938 . . 0 24 hm5C_associated_SNPs_7150 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306942 + 4306922 4306962 41 CTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTC CTTCCTTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTC < 41bp 1 0.0283704880167327 1 0.083772748708725 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306942 chr7:4306938 . . 0 17 hm5C_associated_SNPs_7151 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306943 + 4306923 4306963 41 TTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCC TTCCTTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCC < 41bp 1 0.0316146746271519 1 0.110145092010498 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306943 chr7:4306938 . . 0 16 hm5C_associated_SNPs_7152 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306944 + 4306924 4306964 41 TCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCC TCCTTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCC < 41bp 1 0.0854745663072984 1 0.158236593008041 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306944 chr7:4306938 . . 0 15 hm5C_associated_SNPs_7153 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306946 + 4306926 4306966 41 CTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCT CTTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCT < 41bp 1 0.0225340501231622 1 0.103649377822876 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306946 chr7:4306938 . . 0 13 hm5C_associated_SNPs_7154 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306947 + 4306927 4306967 41 TTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTA TTCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTA < 41bp 1 0.0147758780681065 1 0.2784743309021 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306947 chr7:4306938 . . 0 12 hm5C_associated_SNPs_7155 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306948 + 4306928 4306968 41 TCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTAT TCCCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTAT < 41bp 1 0.130230374327532 1 0.369424760341644 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306948 chr7:4306938 . . 0 11 hm5C_associated_SNPs_7156 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306950 + 4306930 4306970 41 CCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTC CCTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTC < 41bp 1 0.0320185423339853 1 0.0807085931301117 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306950 chr7:4306938 . . 0 9 hm5C_associated_SNPs_7157 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306951 + 4306931 4306971 41 CTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCC CTCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCC < 41bp 1 0.0067858699979414 1 0.0264908969402313 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306951 chr7:4306938 . . 0 8 hm5C_associated_SNPs_7158 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306952 + 4306932 4306972 41 TCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCT TCCCTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCT < 41bp 1 0.0348195724920754 1 0.0222736597061157 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306952 chr7:4306938 . . 0 7 hm5C_associated_SNPs_7159 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306955 + 4306935 4306975 41 CTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCT CTTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCT < 41bp 1 0.0219555634383845 1 0.0184118747711182 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306955 chr7:4306938 . . 0 4 hm5C_associated_SNPs_7160 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306956 + 4306936 4306976 41 TTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTT TTGTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTT < 41bp 1 0.0338954133008946 1 0.108402252197266 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306956 chr7:4306938 . . 0 3 hm5C_associated_SNPs_7161 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4306938 4306938 1 + C G rs151091785 4306958 + 4306938 4306978 41 CTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTTCC GTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTTCC < 41bp 1 0.0518178467030392 1 0.384469926357269 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDK1 ENSG00000146555 UTR3 Human protein_coding chr7:4306958 chr7:4306938 . . 0 1 hm5C_associated_SNPs_7162 0 0 3 PCBP2 POSTAR2 ENCODE chr7:4306920-4307003
64251 chr7 4722141 4722141 1 + G A rs574086514 4722142 + 4722122 4722162 41 TCCGGGCGCGATCGCGGGCGCGGGCTCCTCCGGGGGCTCCT TCCGGGCGCGATCGCGGGCACGGGCTCCTCCGGGGGCTCCT < 41bp 1 0.656430868350495 1 0.810981273651123 experiment 0.68713826329901 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4722142 chr7:4722141 nonsynonymous SNV 0.020 1 20 hm5C_associated_SNPs_7163 0 0 2 FXR2 POSTAR2 ENCODE chr7:4722047-4722226
64251 chr7 4794999 4794999 1 + C T rs112344773 4795002 + 4794982 4795022 41 CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC CCCTACTACCGGACGGCTGACAAAGGCTGGCAGGTGAAGCC < 41bp 1 0.31686514176513 1 0.682305216789246 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4795002 chr7:4794999 synonymous SNV . 0 18 hm5C_associated_SNPs_7164 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:4794961-4795007
64251 chr7 4795022 4795022 1 + C G rs116434298 4795002 + 4794982 4795022 41 CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCG < 41bp 1 0.223110294850685 1 0.598027467727661 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXK1 ENSG00000164916 intronic Human protein_coding chr7:4795002 chr7:4795022 . . 0 41 hm5C_associated_SNPs_7165 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:4795006-4795027
64251 chr7 4823008 4823008 1 + G A rs186993311 4823023 + 4823003 4823043 41 GAGCCGGCAGCCTGAGGGACCCAGCCTCAGACACCTCCTCC GAGCCAGCAGCCTGAGGGACCCAGCCTCAGACACCTCCTCC < 41bp 1 0.177851067878582 1 0.460353344678879 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823023 chr7:4823008 nonsynonymous SNV 0.990 2 6 hm5C_associated_SNPs_7167 0 0 2 PPIG POSTAR2 ENCODE chr7:4822977-4823030
64251 chr7 4823024 4823024 1 + C G rs530642822 4823023 + 4823003 4823043 41 GAGCCGGCAGCCTGAGGGACCCAGCCTCAGACACCTCCTCC GAGCCGGCAGCCTGAGGGACCGAGCCTCAGACACCTCCTCC < 41bp 1 0.448474827087815 1 0.815426766872406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823023 chr7:4823024 synonymous SNV . 0 22 hm5C_associated_SNPs_7168 0 0 2 PPIG POSTAR2 ENCODE chr7:4822977-4823030
64251 chr7 4830463 4830463 1 + G A rs11766611 4830446 + 4830426 4830466 41 TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCGTGC TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCATGC < 41bp 1 0.0829452378284073 1 0.0187576115131378 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830446 chr7:4830463 nonsynonymous SNV 0.020 1 38 hm5C_associated_SNPs_7169 2 0 1 PPIG POSTAR2 ENCODE chr7:4830462-4830504
64251 chr7 4831166 4831166 1 + G A rs186823399 4831165 + 4831145 4831185 41 TTGGCACCCTCACAGACACGCGGGGCTGGCCCCCCTGCTCA TTGGCACCCTCACAGACACGCAGGGCTGGCCCCCCTGCTCA < 41bp 1 0.790568097059464 1 0.851236820220947 experiment 0.418863805881071 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5Z1 ENSG00000242802 UTR3 Human protein_coding chr7:4831165 chr7:4831166 . . 0 22 hm5C_associated_SNPs_7170 0 0 2 LSM11 POSTAR2 ENCODE chr7:4831092-4831206
64251 chr7 5036428 5036428 1 + C A rs62444280 5036420 + 5036400 5036440 41 CTGTGGCCCTGTTCTCAGCCCTCTTCCCCAGTATGTAGCCC CTGTGGCCCTGTTCTCAGCCCTCTTCCCAAGTATGTAGCCC < 41bp 1 0.0614708281451658 1 0.0519283711910248 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036420 chr7:5036428 . . 0 29 hm5C_associated_SNPs_7171 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5036417-5036450
64251 chr7 5036428 5036428 1 + C A rs62444280 5036443 + 5036423 5036463 41 TTCCCCAGTATGTAGCCCTGCATTTCCTGGGCCTGTGGCTG TTCCCAAGTATGTAGCCCTGCATTTCCTGGGCCTGTGGCTG < 41bp 1 0.0291025980450232 1 0.022679328918457 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036443 chr7:5036428 . . 0 6 hm5C_associated_SNPs_7172 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5036417-5036450
64251 chr7 5036442 5036442 1 + G A rs78907407 5036443 + 5036423 5036463 41 TTCCCCAGTATGTAGCCCTGCATTTCCTGGGCCTGTGGCTG TTCCCCAGTATGTAGCCCTACATTTCCTGGGCCTGTGGCTG < 41bp 1 0.0278156997848082 1 0.0213263928890228 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036443 chr7:5036442 . . 0 20 hm5C_associated_SNPs_7173 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5036417-5036450
64251 chr7 5037064 5037064 1 + T G rs566377460 5037048 + 5037028 5037068 41 GCCTCTGCTGGGCCGTGCACCAGGGATGGTGCTGAGTGGGG GCCTCTGCTGGGCCGTGCACCAGGGATGGTGCTGAGGGGGG < 41bp 1 0.762527089844349 1 0.902957856655121 experiment 0.474945820311302 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037048 chr7:5037064 . . 0 37 hm5C_associated_SNPs_7175 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:5037052-5037080
64251 chr7 5037672 5037672 1 + T C rs144121611 5037679 + 5037659 5037699 41 ATTCCTTAGCCAGTGTACCTCCTACCTCAGAGTCTATGTGA ATTCCTTAGCCAGCGTACCTCCTACCTCAGAGTCTATGTGA < 41bp 1 0.0292301408497024 1 0.132812649011612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5037679 chr7:5037672 . . 0 14 hm5C_associated_SNPs_7176 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:5037653-5037674
64251 chr7 5230037 5230037 1 + C T rs542906466 5230030 + 5230010 5230050 41 CGCGCCCTCCCCGGCCGGGCCCACTCGCCGCGCGCCCAGCC CGCGCCCTCCCCGGCCGGGCCCACTCGTCGCGCGCCCAGCC < 41bp 1 0.241623754197988 1 0.0525369346141815 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 UTR5 Human protein_coding chr7:5230030 chr7:5230037 . . 0 28 hm5C_associated_SNPs_7177 0 0 2 DDX3X POSTAR2 ENCODE chr7:5229999-5230059
64251 chr7 5230037 5230037 1 + C T rs542906466 5230031 + 5230011 5230051 41 GCGCCCTCCCCGGCCGGGCCCACTCGCCGCGCGCCCAGCCA GCGCCCTCCCCGGCCGGGCCCACTCGTCGCGCGCCCAGCCA < 41bp 1 0.445454212064337 1 0.0298338234424591 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 UTR5 Human protein_coding chr7:5230031 chr7:5230037 . . 0 27 hm5C_associated_SNPs_7178 0 0 2 DDX3X POSTAR2 ENCODE chr7:5229999-5230059
64251 chr7 5230037 5230037 1 + C T rs542906466 5230033 + 5230013 5230053 41 GCCCTCCCCGGCCGGGCCCACTCGCCGCGCGCCCAGCCATG GCCCTCCCCGGCCGGGCCCACTCGTCGCGCGCCCAGCCATG < 41bp 1 0.713722825627719 1 0.134775996208191 experiment 0.572554348744561 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 UTR5 Human protein_coding chr7:5230033 chr7:5230037 . . 0 25 hm5C_associated_SNPs_7179 0 0 2 DDX3X POSTAR2 ENCODE chr7:5229999-5230059
64251 chr7 5269314 5269314 1 + A G rs34104542 5269313 + 5269293 5269333 41 CTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAA CTGCCCCTTAGTCACTCAGACGTACGGCGCAGCTGCAGGAA < 41bp 1 0.154608013347909 1 0.185001134872437 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269313 chr7:5269314 synonymous SNV . 0 22 hm5C_associated_SNPs_7180 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5269301-5269331
64251 chr7 5336819 5336819 1 + A G rs376762145 5336820 + 5336800 5336840 41 CACGACGTTGTCGCCGGGGACGTCCACTTCGTAAGTGCGCA CACGACGTTGTCGCCGGGGGCGTCCACTTCGTAAGTGCGCA < 41bp 1 0.065690976142877 1 0.132944971323013 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5336820 chr7:5336819 nonsynonymous SNV 0.181 1 20 hm5C_associated_SNPs_7183 0 0 1 BUD13 POSTAR2 ENCODE chr7:5336813-5336826
64251 chr7 5644959 5644959 1 + G A rs140594742 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA GGCAACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA < 41bp 1 0.233863216234803 1 0.150693386793137 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644959 nonsynonymous SNV 0.882 1 4 hm5C_associated_SNPs_7186 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr7 5645521 5645521 1 + C T rs185458134 5645522 + 5645502 5645542 41 CCCAGCCACCTCCTCCCAGCCCCCCAGGAGAGCTGGGCACA CCCAGCCACCTCCTCCCAGTCCCCCAGGAGAGCTGGGCACA < 41bp 1 0.122155116391256 1 0.4119972884655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645522 chr7:5645521 . . 0 20 hm5C_associated_SNPs_7187 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:5645491-5645548
64251 chr7 5645521 5645521 1 + C T rs185458134 5645523 + 5645503 5645543 41 CCAGCCACCTCCTCCCAGCCCCCCAGGAGAGCTGGGCACAT CCAGCCACCTCCTCCCAGTCCCCCAGGAGAGCTGGGCACAT < 41bp 1 0.480758764585871 1 0.542753636837006 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645523 chr7:5645521 . . 0 19 hm5C_associated_SNPs_7188 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:5645491-5645548
64251 chr7 5645521 5645521 1 + C T rs185458134 5645524 + 5645504 5645544 41 CAGCCACCTCCTCCCAGCCCCCCAGGAGAGCTGGGCACATG CAGCCACCTCCTCCCAGTCCCCCAGGAGAGCTGGGCACATG < 41bp 1 0.281062316381138 1 0.412904888391495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645524 chr7:5645521 . . 0 18 hm5C_associated_SNPs_7189 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:5645491-5645548
64251 chr7 5645682 5645682 1 + G A rs3735288 5645671 + 5645651 5645691 41 GTGGTGGCTGGAAACAGCCCCTCTCCCACGTGGCAGAGGCT GTGGTGGCTGGAAACAGCCCCTCTCCCACGTAGCAGAGGCT < 41bp 1 0.0566432126704201 1 0.322840869426727 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645671 chr7:5645682 . . 0 32 hm5C_associated_SNPs_7190 0 0 3 GEMIN5 POSTAR2 ENCODE chr7:5645646-5645686
64251 chr7 6617237 6617237 1 + C T rs115316495 6617223 + 6617203 6617243 41 CTTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTC CTTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCTCACCTC < 41bp 1 0.344643563454604 1 0.138655841350555 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617223 chr7:6617237 . . 0 35 hm5C_associated_SNPs_7191 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6617195-6617238
64251 chr7 6617237 6617237 1 + C T rs115316495 6617224 + 6617204 6617244 41 TTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCG TTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCTCACCTCG < 41bp 1 0.628309287275501 1 0.211697816848755 experiment 0.743381425448999 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617224 chr7:6617237 . . 0 34 hm5C_associated_SNPs_7192 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6617195-6617238
64251 chr7 6617237 6617237 1 + C T rs115316495 6617226 + 6617206 6617246 41 TCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCC TCCCCTTGTGTGTAGGGCCGCCGTCCCACCCTCACCTCGCC < 41bp 1 0.109194259373896 1 0.127444833517075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617226 chr7:6617237 . . 0 32 hm5C_associated_SNPs_7193 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6617195-6617238
64251 chr7 6617237 6617237 1 + C T rs115316495 6617227 + 6617207 6617247 41 CCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCCC CCCCTTGTGTGTAGGGCCGCCGTCCCACCCTCACCTCGCCC < 41bp 1 0.143191652068309 1 0.0711108446121216 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617227 chr7:6617237 . . 0 31 hm5C_associated_SNPs_7194 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6617195-6617238
64251 chr7 6617240 6617240 1 + C G rs572873463 6617223 + 6617203 6617243 41 CTTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTC CTTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCAGCTC < 41bp 1 0.333270810386897 1 0.093106746673584 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617223 chr7:6617240 . . 0 38 hm5C_associated_SNPs_7195 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr7 6617240 6617240 1 + C G rs572873463 6617224 + 6617204 6617244 41 TTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCG TTTCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCAGCTCG < 41bp 1 0.629046427132655 1 0.155768603086472 experiment 0.74190714573469 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617224 chr7:6617240 . . 0 37 hm5C_associated_SNPs_7196 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr7 6617240 6617240 1 + C G rs572873463 6617226 + 6617206 6617246 41 TCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCC TCCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCAGCTCGCC < 41bp 1 0.0869605864427489 1 0.0539598166942596 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617226 chr7:6617240 . . 0 35 hm5C_associated_SNPs_7197 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr7 6617240 6617240 1 + C G rs572873463 6617227 + 6617207 6617247 41 CCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCCC CCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCAGCTCGCCC < 41bp 1 0.167353972021474 1 0.0590359568595886 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617227 chr7:6617240 . . 0 34 hm5C_associated_SNPs_7198 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr7 6617247 6617247 1 + C G rs11559147 6617227 + 6617207 6617247 41 CCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCCC CCCCTTGTGTGTAGGGCCGCCGTCCCACCCCCACCTCGCCG < 41bp 1 0.173852024062746 1 0.058589905500412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617227 chr7:6617247 . . 0 41 hm5C_associated_SNPs_7199 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr7 6631414 6631414 1 + G T rs10260097 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGTATGAGCT < 41bp 1 0.154356010968678 1 0.270443230867386 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631414 synonymous SNV . 0 34 hm5C_associated_SNPs_7200 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6631414 6631414 1 + G T rs10260097 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGCCCTCAAGGGAACAAAGCCGATGACAGCCGTATGAGCTT < 41bp 1 0.452280309145778 1 0.488619714975357 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631414 synonymous SNV . 0 33 hm5C_associated_SNPs_7201 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6660831 6660831 1 + C T rs61745889 6660834 + 6660814 6660854 41 ACAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAA ACAGCGGCCAGCAGTCTTGGCCCCAGTGGGGGCCAGTGAAA < 41bp 1 0.491272226364901 1 0.25109401345253 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660834 chr7:6660831 nonsynonymous SNV 0.002 1 18 hm5C_associated_SNPs_7202 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6660831 6660831 1 + C T rs61745889 6660835 + 6660815 6660855 41 CAGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAAT CAGCGGCCAGCAGTCTTGGCCCCAGTGGGGGCCAGTGAAAT < 41bp 1 0.146778957794167 1 0.571804702281952 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660835 chr7:6660831 nonsynonymous SNV 0.002 1 17 hm5C_associated_SNPs_7203 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6660831 6660831 1 + C T rs61745889 6660836 + 6660816 6660856 41 AGCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATC AGCGGCCAGCAGTCTTGGCCCCAGTGGGGGCCAGTGAAATC < 41bp 1 0.307722922798878 1 0.196472346782684 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660836 chr7:6660831 nonsynonymous SNV 0.002 1 16 hm5C_associated_SNPs_7204 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6660831 6660831 1 + C T rs61745889 6660837 + 6660817 6660857 41 GCGGCCAGCAGTCTCGGCCCCAGTGGGGGCCAGTGAAATCG GCGGCCAGCAGTCTTGGCCCCAGTGGGGGCCAGTGAAATCG < 41bp 1 0.466258435416865 1 0.715814828872681 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660837 chr7:6660831 nonsynonymous SNV 0.002 1 15 hm5C_associated_SNPs_7205 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6660831 6660831 1 + C T rs61745889 6660846 + 6660826 6660866 41 AGTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAA AGTCTTGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAA < 41bp 1 0.221600514606953 1 0.596356749534607 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660846 chr7:6660831 nonsynonymous SNV 0.002 1 6 hm5C_associated_SNPs_7206 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6660831 6660831 1 + C T rs61745889 6660847 + 6660827 6660867 41 GTCTCGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAAC GTCTTGGCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAAC < 41bp 1 0.259080243522784 1 0.81473571062088 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6660847 chr7:6660831 nonsynonymous SNV 0.002 1 5 hm5C_associated_SNPs_7207 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6660810-6660839
64251 chr7 6769762 6769762 1 + G C rs573751696 6769749 + 6769729 6769769 41 TGGCCCAGGCCGCCGCTGTACGGTGAGTCCCAGGGAGGCGG TGGCCCAGGCCGCCGCTGTACGGTGAGTCCCAGCGAGGCGG < 41bp 1 0.538988629365618 1 0.299531251192093 experiment 0.922022741268764 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF12;PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6769749 chr7:6769762 . . 0 34 hm5C_associated_SNPs_7209 0 0 7 BUD13 POSTAR2 ENCODE chr7:6769685-6769776
64251 chr7 12250939 12250939 1 + G A rs111783004 12250938 + 12250918 12250958 41 CCAGCTCTACGGCGGCCGCGCGCTCCAGGCCGGTCGCTCCA CCAGCTCTACGGCGGCCGCGCACTCCAGGCCGGTCGCTCCA < 41bp 1 0.395509594736359 1 0.111116081476212 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM106B ENSG00000106460 UTR5 Human protein_coding chr7:12250938 chr7:12250939 . . 0 22 hm5C_associated_SNPs_7212 0 0 1 YBX3 POSTAR2 ENCODE chr7:12250928-12250979
64251 chr7 12269417 12269417 1 + C A rs3173615 12269401 + 12269381 12269421 41 AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATT AAACAGTTATTGGAAAGGCACGCTTAAACAACATAAACATT < 41bp 1 0.19289521151188 1 0.0455610752105713 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12269401 chr7:12269417 nonsynonymous SNV 0.988 2 37 hm5C_associated_SNPs_7213 0 1 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:12269405-12269441
64251 chr7 16745716 16745716 1 + G T rs7780235 16745735 + 16745715 16745755 41 TGGCTCAACAAGCACAATACCTAGGTTACCACACACCACTT TTGCTCAACAAGCACAATACCTAGGTTACCACACACCACTT < 41bp 1 0.775085040740381 1 0.229031443595886 experiment 0.449829918519238 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BZW2 ENSG00000235837 ncRNA_intronic Human antisense chr7:16745735 chr7:16745716 . . 0 2 hm5C_associated_SNPs_7214 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:16745693-16745720
64251 chr7 16793504 16793504 1 + A C rs6975847 16793502 + 16793482 16793522 41 GCGTTGCTGCCCCGCCTGGGCCAGGCCCCAAAGGCAAGGAC GCGTTGCTGCCCCGCCTGGGCCCGGCCCCAAAGGCAAGGAC < 41bp 1 0.78160146955683 1 0.0998018682003021 experiment 0.43679706088634 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 UTR5 Human protein_coding chr7:16793502 chr7:16793504 . . 0 23 hm5C_associated_SNPs_7215 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:16793475-16793505
64251 chr7 16793504 16793504 1 + A C rs6975847 16793503 + 16793483 16793523 41 CGTTGCTGCCCCGCCTGGGCCAGGCCCCAAAGGCAAGGACA CGTTGCTGCCCCGCCTGGGCCCGGCCCCAAAGGCAAGGACA < 41bp 1 0.621056393321936 1 0.192916840314865 experiment 0.757887213356128 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 UTR5 Human protein_coding chr7:16793503 chr7:16793504 . . 0 22 hm5C_associated_SNPs_7216 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:16793475-16793505
64251 chr7 16823095 16823095 1 + G A rs11491 16823094 + 16823074 16823114 41 GAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT GAACCAGAAAGACCCCCGCGCAAATCCTAGTGCATTCCTTT < 41bp 1 0.150016847821721 1 0.101660639047623 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823094 chr7:16823095 synonymous SNV . 0 22 hm5C_associated_SNPs_7217 0 0 1 U2AF2 POSTAR2 ENCODE chr7:16823026-16823106
64251 chr7 23221750 23221750 1 + G C rs368129535 23221740 + 23221720 23221760 41 TTCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTG TTCTTCCTTCAAGGCCGGTGCCGCTTTGGACATCGGTGCTG < 41bp 1 0.412507583159109 1 0.175082236528397 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221740 chr7:23221750 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_7223 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr7 23221750 23221750 1 + G C rs368129535 23221741 + 23221721 23221761 41 TCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTGG TCTTCCTTCAAGGCCGGTGCCGCTTTGGACATCGGTGCTGG < 41bp 1 0.586129395149356 1 0.114789605140686 experiment 0.827741209701289 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221741 chr7:23221750 nonsynonymous SNV 0.999 1 30 hm5C_associated_SNPs_7224 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr7 23235483 23235483 1 + A G rs1728327 23235473 + 23235453 23235493 41 TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGCTTG TTCAGGTTTTACAGACATTTCACCAGAGGAGTTGAGGCTTG < 41bp 1 0.726149534737341 1 0.81220281124115 experiment 0.547700930525318 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235473 chr7:23235483 synonymous SNV . 0 31 hm5C_associated_SNPs_7225 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23235463-23235520
64251 chr7 23338987 23338987 1 + C A rs375849242 23339007 + 23338987 23339027 41 CGTGTGGCGCGGCTGCTCGCCCCACTAATGTGGCGCAGGGC AGTGTGGCGCGGCTGCTCGCCCCACTAATGTGGCGCAGGGC < 41bp 1 0.220056879460469 1 0.396957457065582 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23339007 chr7:23338987 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_7226 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:23338969-23338988
64251 chr7 27827103 27827103 1 + T A rs11540483 27827088 + 27827068 27827108 41 CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAATTTAGAT CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAATATAGAT < 41bp 1 0.1449688784135 1 0.321991413831711 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27827088 chr7:27827103 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_7228 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr7:27827085-27827106
64251 chr7 28859859 28859859 1 + G A rs4722856 28859840 + 28859820 28859860 41 GGAGACACTAGGGAAGGGAGCTTTGTAAGCCTTGATTGCGA GGAGACACTAGGGAAGGGAGCTTTGTAAGCCTTGATTGCAA < 41bp 1 0.132663816521661 1 0.140374779701233 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB5 ENSG00000146592 UTR3 Human protein_coding chr7:28859840 chr7:28859859 . . 0 40 hm5C_associated_SNPs_7229 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:28859827-28860005
64251 chr7 30661069 30661069 1 + C A rs113958280 30661058 + 30661038 30661078 41 TCGTTCCTGTTATGACCTCTCCTGTCATGCACGAGCCACCA TCGTTCCTGTTATGACCTCTCCTGTCATGCAAGAGCCACCA < 41bp 1 0.234448155888673 1 0.244148850440979 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30661058 chr7:30661069 synonymous SNV . 0 32 hm5C_associated_SNPs_7230 4 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr7:30661010-30661111
64251 chr7 30961790 30961790 1 + G A rs28362731 30961771 + 30961751 30961791 41 GCGTGCTGGCTACTACCGACCGGAGGCGCCGTGACCTTGGT GCGTGCTGGCTACTACCGACCGGAGGCGCCGTGACCTTGAT < 41bp 1 0.781836272275189 1 0.916855812072754 experiment 0.436327455449623 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP1 ENSG00000240583;ENSG00000250424 CDS Human other chr7:30961771 chr7:30961790 nonsynonymous SNV 0.124 1 40 hm5C_associated_SNPs_7240 0 0 2 GEMIN5 POSTAR2 ENCODE chr7:30961762-30961802
64251 chr7 32768371 32768371 1 + C T rs71534334 32768376 + 32768356 32768396 41 CAGCGCCTCGGGCGGCGCCGCGGTGGCCCCGGCAGCCCCGC CAGCGCCTCGGGCGGTGCCGCGGTGGCCCCGGCAGCCCCGC < 41bp 1 0.705943916431966 1 0.944644451141357 experiment 0.588112167136068 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNRF2P1 ENSG00000237004 ncRNA_exonic Human processed_pseudogene chr7:32768376 chr7:32768371 . . 0 16 hm5C_associated_SNPs_7241 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:32768327-32768371
64251 chr7 32768371 32768371 1 + C T rs71534334 32768388 + 32768368 32768408 41 CGGCGCCGCGGTGGCCCCGGCAGCCCCGCGCAGCTGTTTCC CGGTGCCGCGGTGGCCCCGGCAGCCCCGCGCAGCTGTTTCC < 41bp 1 0.435362562665729 1 0.175409317016602 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNRF2P1 ENSG00000237004 ncRNA_exonic Human processed_pseudogene chr7:32768388 chr7:32768371 . . 0 4 hm5C_associated_SNPs_7242 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:32768327-32768371
64251 chr7 33045738 33045738 1 + C T rs118113675 33045751 + 33045731 33045771 41 GCAGAGTCTCCCTTTGTCGCCAGGCTGGAGTGCAGTGGTGC GCAGAGTTTCCCTTTGTCGCCAGGCTGGAGTGCAGTGGTGC < 41bp 1 0.419706908986355 1 0.440911293029785 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control FKBP9 ENSG00000122642 UTR3 Human protein_coding chr7:33045751 chr7:33045738 . . 0 8 hm5C_associated_SNPs_7248 0 0 9 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr7:33045700-33045740
64251 chr7 33045749 33045749 1 + G A rs77844797 33045751 + 33045731 33045771 41 GCAGAGTCTCCCTTTGTCGCCAGGCTGGAGTGCAGTGGTGC GCAGAGTCTCCCTTTGTCACCAGGCTGGAGTGCAGTGGTGC < 41bp 1 0.460131579442035 1 0.434269368648529 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control FKBP9 ENSG00000122642 UTR3 Human protein_coding chr7:33045751 chr7:33045749 . . 0 19 hm5C_associated_SNPs_7249 0 0 4 FAM120A POSTAR2 ENCODE chr7:33045718-33045763
64251 chr7 35735906 35735906 1 + T G rs562463249 35735905 + 35735885 35735925 41 GACTAGTTGGATTTCCTAGGCTGGCTAAGAATCCCTAAGCC GACTAGTTGGATTTCCTAGGCGGGCTAAGAATCCCTAAGCC < 41bp 1 0.471271322899993 1 0.927290976047516 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LOC101930085 ENSG00000271122 ncRNA_exonic Human antisense chr7:35735905 chr7:35735906 . . 0 22 hm5C_associated_SNPs_7250 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:35735906-35735907
64251 chr7 35943900 35943900 1 + T C rs148369403 35943897 + 35943877 35943917 41 AACAAGAAGAAAGGGAAGATCTTTTAAACTCTCTATTGACC AACAAGAAGAAAGGGAAGATCTTCTAAACTCTCTATTGACC < 41bp 1 0.131874326401855 1 0.132549971342087 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35943897 chr7:35943900 synonymous SNV . 0 24 hm5C_associated_SNPs_7251 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:35943885-35943928
64251 chr7 36445855 36445855 1 + A C rs61737563 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCCGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG < 41bp 1 0.528029370495431 1 0.391947448253632 experiment 0.943941259009139 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445855 synonymous SNV . 0 8 hm5C_associated_SNPs_7253 1 0 2 DDX24 POSTAR2 ENCODE chr7:36445823-36445858
64251 chr7 36445856 36445856 1 + G A rs197367 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAAACCTCTGCTTTCAAATGCCTCGGCAACTCCAG < 41bp 1 0.486970358789547 1 0.31701922416687 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445856 nonsynonymous SNV 0.004 0 9 hm5C_associated_SNPs_7254 1 0 2 DDX24 POSTAR2 ENCODE chr7:36445823-36445858
64251 chr7 36458974 36458974 1 + G A rs547520121 36458984 + 36458964 36459004 41 AGAGCCAAGAGGAGATGGATCAAGCATTAGCAGAAAGCAGC AGAGCCAAGAAGAGATGGATCAAGCATTAGCAGAAAGCAGC < 41bp 1 0.447546586416319 1 0.454188138246536 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36458984 chr7:36458974 synonymous SNV . 0 11 hm5C_associated_SNPs_7255 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:36458940-36458980
64251 chr7 36466571 36466571 1 + C G rs148635845 36466562 + 36466542 36466582 41 GGTCTTAGTGCTGTGCGAACCAGCAACTTCGCCCTTGTTGG GGTCTTAGTGCTGTGCGAACCAGCAACTTGGCCCTTGTTGG < 41bp 1 0.785157243031946 1 0.860233783721924 experiment 0.429685513936108 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36466562 chr7:36466571 nonsynonymous SNV 0.920 3 30 hm5C_associated_SNPs_7256 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36466558-36466581
64251 chr7 36492101 36492101 1 + A G rs544329756 36492117 + 36492097 36492137 41 CTGCAGATACTAAAGAAGAGCGGGATCTCTGGATGCAAAAA CTGCGGATACTAAAGAAGAGCGGGATCTCTGGATGCAAAAA < 41bp 1 0.766964041488389 1 0.599901080131531 experiment 0.466071917023221 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36492117 chr7:36492101 synonymous SNV . 0 5 hm5C_associated_SNPs_7257 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:36492086-36492111
64251 chr7 36492212 36492212 1 + C A rs2052197 36492192 + 36492172 36492212 41 AACCTGATGCTTGCTACAAACCTATTGGAAAGCCTTAAACC AACCTGATGCTTGCTACAAACCTATTGGAAAGCCTTAAACA < 41bp 1 0.0888780227018719 1 0.0647245049476624 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANLN ENSG00000011426 UTR3 Human protein_coding chr7:36492192 chr7:36492212 . . 0 41 hm5C_associated_SNPs_7258 0 0 1 RPS3 POSTAR2 ENCODE chr7:36492154-36492249
64251 chr7 38217910 38217910 1 + G A rs374440592 38217925 + 38217905 38217945 41 CCGCTGGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCC CCGCTAGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCC < 41bp 1 0.758049062850817 1 0.368970990180969 experiment 0.483901874298366 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STARD3NL ENSG00000010270 UTR5 Human protein_coding chr7:38217925 chr7:38217910 . . 0 6 hm5C_associated_SNPs_7259 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:38217900-38217920
64251 chr7 38217910 38217910 1 + G A rs374440592 38217929 + 38217909 38217949 41 TGGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCCCCTC TAGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCCCCTC < 41bp 1 0.70763113846278 1 0.106063097715378 experiment 0.584737723074439 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STARD3NL ENSG00000010270 UTR5 Human protein_coding chr7:38217929 chr7:38217910 . . 0 2 hm5C_associated_SNPs_7260 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:38217900-38217920
64251 chr7 38217910 38217910 1 + G A rs374440592 38217930 + 38217910 38217950 41 GGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCCCCTCA AGACTGGGTCCCGGTCACGCCCCGCCAAGCCCCGCCCCTCA < 41bp 1 0.582735873077567 1 0.441054612398148 experiment 0.834528253844865 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STARD3NL ENSG00000010270 UTR5 Human protein_coding chr7:38217930 chr7:38217910 . . 0 1 hm5C_associated_SNPs_7261 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:38217900-38217920
64251 chr7 38217972 38217972 1 + C T rs147811966 38217964 + 38217944 38217984 41 CCCCTCAGGCCGGGGCGCGACCGCGGATCCGCAGTTCCCGG CCCCTCAGGCCGGGGCGCGACCGCGGATTCGCAGTTCCCGG < 41bp 1 0.712514888847966 1 0.666511714458466 experiment 0.574970222304068 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control STARD3NL ENSG00000010270 UTR5 Human protein_coding chr7:38217964 chr7:38217972 . . 0 29 hm5C_associated_SNPs_7262 0 0 6 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:38217960-38217980
64251 chr7 39612201 39612201 1 + C T rs34189922 39612212 + 39612192 39612232 41 GAGCATGCACATTCAGAAAACCCAAGCCCCACATGGATTTT GAGCATGCATATTCAGAAAACCCAAGCCCCACATGGATTTT < 41bp 1 0.529247530858247 1 0.0733033418655396 experiment 0.941504938283505 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39612212 chr7:39612201 nonsynonymous SNV 0.920 0 10 hm5C_associated_SNPs_7263 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:39612147-39612208
64251 chr7 39612201 39612201 1 + C T rs34189922 39612213 + 39612193 39612233 41 AGCATGCACATTCAGAAAACCCAAGCCCCACATGGATTTTG AGCATGCATATTCAGAAAACCCAAGCCCCACATGGATTTTG < 41bp 1 0.224612617206473 1 0.0855641067028046 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39612213 chr7:39612201 nonsynonymous SNV 0.920 0 9 hm5C_associated_SNPs_7264 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:39612147-39612208
64251 chr7 39612201 39612201 1 + C T rs34189922 39612218 + 39612198 39612238 41 GCACATTCAGAAAACCCAAGCCCCACATGGATTTTGGAACA GCATATTCAGAAAACCCAAGCCCCACATGGATTTTGGAACA < 41bp 1 0.581415542869029 1 0.20612433552742 experiment 0.837168914261942 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39612218 chr7:39612201 nonsynonymous SNV 0.920 0 4 hm5C_associated_SNPs_7265 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:39612147-39612208
64251 chr7 39991447 39991447 1 + C T rs3735137 39991428 + 39991408 39991448 41 AGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCT AGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGTT < 41bp 1 0.240479802478269 1 0.779687166213989 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991428 chr7:39991447 nonsynonymous SNV 0.992 0 40 hm5C_associated_SNPs_7266 0 0 2 BUD13 POSTAR2 ENCODE chr7:39991400-39991462
64251 chr7 43810764 43810764 1 + G A rs699512 43810765 + 43810745 43810785 41 GGAAGAGACCAAGATGAATGCAGAGGTGAGTTCTTTACAAA GGAAGAGACCAAGATGAATACAGAGGTGAGTTCTTTACAAA < 41bp 1 0.746155669871141 1 0.730075299739838 experiment 0.507688660257718 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BLVRA ENSG00000106605 CDS Human protein_coding chr7:43810765 chr7:43810764 nonsynonymous SNV 0.903 0 20 hm5C_associated_SNPs_7270 0 0 4 DDX3X POSTAR2 ENCODE chr7:43810758-43810768
64251 chr7 44084292 44084292 1 + C G rs4430012 44084287 + 44084267 44084307 41 CGGCTGTCAAAGGGGCGGCCCGGCCCGGCCCGGAAGCTACA CGGCTGTCAAAGGGGCGGCCCGGCCGGGCCCGGAAGCTACA < 41bp 1 0.473785969033886 1 0.181610435247421 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 UTR5 Human protein_coding chr7:44084287 chr7:44084292 . . 0 26 hm5C_associated_SNPs_7273 0 0 1 DDX3X POSTAR2 ENCODE chr7:44084287-44084362
64251 chr7 44084298 44084298 1 + G A rs550474673 44084287 + 44084267 44084307 41 CGGCTGTCAAAGGGGCGGCCCGGCCCGGCCCGGAAGCTACA CGGCTGTCAAAGGGGCGGCCCGGCCCGGCCCAGAAGCTACA < 41bp 1 0.413961370805149 1 0.106336414813995 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 UTR5 Human protein_coding chr7:44084287 chr7:44084298 . . 0 32 hm5C_associated_SNPs_7274 0 0 1 DDX3X POSTAR2 ENCODE chr7:44084287-44084362
64251 chr7 44084298 44084298 1 + G A rs550474673 44084291 + 44084271 44084311 41 TGTCAAAGGGGCGGCCCGGCCCGGCCCGGAAGCTACAGCAG TGTCAAAGGGGCGGCCCGGCCCGGCCCAGAAGCTACAGCAG < 41bp 1 0.581581170974222 1 0.599841773509979 experiment 0.836837658051556 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNL ENSG00000136279 UTR5 Human protein_coding chr7:44084291 chr7:44084298 . . 0 28 hm5C_associated_SNPs_7275 0 0 1 DDX3X POSTAR2 ENCODE chr7:44084287-44084362
64251 chr7 44084298 44084298 1 + G A rs550474673 44084292 + 44084272 44084312 41 GTCAAAGGGGCGGCCCGGCCCGGCCCGGAAGCTACAGCAGC GTCAAAGGGGCGGCCCGGCCCGGCCCAGAAGCTACAGCAGC < 41bp 1 0.567991971529266 1 0.242282927036285 experiment 0.864016056941467 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNL ENSG00000136279 UTR5 Human protein_coding chr7:44084292 chr7:44084298 . . 0 27 hm5C_associated_SNPs_7276 0 0 1 DDX3X POSTAR2 ENCODE chr7:44084287-44084362
64251 chr7 44096482 44096482 1 + G A rs61735009 44096481 + 44096461 44096501 41 GAGAGTGGCCGCTTCCAGGACGTGGGACCCCAGGCCCCAGT GAGAGTGGCCGCTTCCAGGACATGGGACCCCAGGCCCCAGT < 41bp 1 0.658489284635936 1 0.315038979053497 experiment 0.683021430728128 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44096481 chr7:44096482 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_7277 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:44096465-44096493
64251 chr7 44099167 44099167 1 + C T rs147270019 44099175 + 44099155 44099195 41 GGAGCCGGCGCCCAGCACTCCTCCATGTCTGGTGCAGGCAG GGAGCCGGCGCCTAGCACTCCTCCATGTCTGGTGCAGGCAG < 41bp 1 0.764046051576911 1 0.975969672203064 experiment 0.471907896846177 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44099175 chr7:44099167 synonymous SNV . 0 13 hm5C_associated_SNPs_7278 0 0 2 PPIG POSTAR2 ENCODE chr7:44099140-44099187
64251 chr7 44747499 44747499 1 + G A rs2070606 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGCCGGCCGGGACCCAGCAGCTGCTCCAGCCACCGGCA < 41bp 1 0.712617494313416 1 0.74685001373291 experiment 0.574765011373168 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747499 synonymous SNV . 0 22 hm5C_associated_SNPs_7279 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr7 44747514 44747514 1 + C A rs61756583 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACAGGCA < 41bp 1 0.722974571583078 1 0.791908740997314 experiment 0.554050856833845 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747514 synonymous SNV . 0 37 hm5C_associated_SNPs_7280 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr7 44747903 44747903 1 + T C rs14239 44747904 + 44747884 44747924 41 GGGTCAGCTCTGGCCACAATCCTCCCCACCAGTCTCACCCA GGGTCAGCTCTGGCCACAACCCTCCCCACCAGTCTCACCCA < 41bp 1 0.143308727177812 1 0.44381245970726 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44747904 chr7:44747903 . . 0 20 hm5C_associated_SNPs_7281 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44747886-44747927
64251 chr7 44747903 44747903 1 + T C rs14239 44747905 + 44747885 44747925 41 GGTCAGCTCTGGCCACAATCCTCCCCACCAGTCTCACCCAC GGTCAGCTCTGGCCACAACCCTCCCCACCAGTCTCACCCAC < 41bp 1 0.635192517538401 1 0.712713122367859 experiment 0.729614964923198 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44747905 chr7:44747903 . . 0 19 hm5C_associated_SNPs_7282 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44747886-44747927
64251 chr7 44747903 44747903 1 + T C rs14239 44747907 + 44747887 44747927 41 TCAGCTCTGGCCACAATCCTCCCCACCAGTCTCACCCACTA TCAGCTCTGGCCACAACCCTCCCCACCAGTCTCACCCACTA < 41bp 1 0.581069978021344 1 0.266445189714432 experiment 0.837860043957312 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44747907 chr7:44747903 . . 0 17 hm5C_associated_SNPs_7283 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44747886-44747927
64251 chr7 44747903 44747903 1 + T C rs14239 44747908 + 44747888 44747928 41 CAGCTCTGGCCACAATCCTCCCCACCAGTCTCACCCACTAG CAGCTCTGGCCACAACCCTCCCCACCAGTCTCACCCACTAG < 41bp 1 0.0589618032103866 1 0.120081901550293 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44747908 chr7:44747903 . . 0 16 hm5C_associated_SNPs_7284 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44747886-44747927
64251 chr7 44747903 44747903 1 + T C rs14239 44747909 + 44747889 44747929 41 AGCTCTGGCCACAATCCTCCCCACCAGTCTCACCCACTAGG AGCTCTGGCCACAACCCTCCCCACCAGTCTCACCCACTAGG < 41bp 1 0.0797058523186361 1 0.0964924991130829 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control OGDH ENSG00000105953 UTR3 Human protein_coding chr7:44747909 chr7:44747903 . . 0 15 hm5C_associated_SNPs_7285 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44747886-44747927
64251 chr7 44806159 44806159 1 + C T rs199842392 44806140 + 44806120 44806160 41 CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCG CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGTG < 41bp 1 0.651659800763178 1 0.322388708591461 experiment 0.696680398473644 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806140 chr7:44806159 nonsynonymous SNV 0.134 0 40 hm5C_associated_SNPs_7287 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr7:44806140-44806160
64251 chr7 44836305 44836305 1 + A G rs373612022 44836315 + 44836295 44836335 41 CCGCCGAGGAAAACCGTGTACTATTAGCCATGGTCAACCCC CCGCCGAGGAGAACCGTGTACTATTAGCCATGGTCAACCCC < 41bp 1 0.312295094356041 1 0.0230961740016937 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIA ENSG00000196262 UTR5 Human protein_coding chr7:44836315 chr7:44836305 . . 0 11 hm5C_associated_SNPs_7288 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44836283-44836339
64251 chr7 44836314 44836314 1 + A G rs6850 44836315 + 44836295 44836335 41 CCGCCGAGGAAAACCGTGTACTATTAGCCATGGTCAACCCC CCGCCGAGGAAAACCGTGTGCTATTAGCCATGGTCAACCCC < 41bp 1 0.276920590851526 1 0.0236002802848816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIA ENSG00000196262 UTR5 Human protein_coding chr7:44836315 chr7:44836314 . . 0 20 hm5C_associated_SNPs_7289 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44836283-44836339
64251 chr7 45755013 45755013 1 + G T rs56138316 45755028 + 45755008 45755048 41 AGCCAGCAGGGTTGGGGGTCCGCCTCCTCACTGCTCCTCAA AGCCATCAGGGTTGGGGGTCCGCCTCCTCACTGCTCCTCAA < 41bp 1 0.358525268088177 1 0.487986713647842 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 UTR3 Human protein_coding chr7:45755028 chr7:45755013 . . 0 6 hm5C_associated_SNPs_7290 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:45755013-45755014
64251 chr7 55259429 55259429 1 + G A rs41420046 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAAGACCGTCGCTTGGTGCACCGCGA < 41bp 1 0.117724082938203 1 0.267926454544067 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259429 synonymous SNV . 0 18 hm5C_associated_SNPs_7293 1 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr7 55259450 55259450 1 + C A rs2229066 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGAGA < 41bp 1 0.0610788395885902 1 0.230445683002472 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259450 synonymous SNV . 0 39 hm5C_associated_SNPs_7294 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr7 55273868 55273868 1 + G A rs572674550 55273862 + 55273842 55273882 41 CCTTCATGGCCCCAGCAGGCCGGATCGGTACTGTATCAAGT CCTTCATGGCCCCAGCAGGCCGGATCAGTACTGTATCAAGT < 41bp 1 0.303178049089532 1 0.190010845661163 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EGFR ENSG00000146648 UTR3 Human protein_coding chr7:55273862 chr7:55273868 . . 0 27 hm5C_associated_SNPs_7295 1 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:55273830-55273873
64251 chr7 55459563 55459563 1 + A G rs2049497 55459578 + 55459558 55459598 41 AAGACAGCTGATCCCCATGACTGCTCTGCTTATACTGGCTG AAGACGGCTGATCCCCATGACTGCTCTGCTTATACTGGCTG < 41bp 1 0.336272425840761 1 0.0496212244033813 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55459578 chr7:55459563 synonymous SNV . 0 6 hm5C_associated_SNPs_7297 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:55459562-55459600
64251 chr7 56067016 56067016 1 + G C rs4689 56066996 + 56066976 56067016 41 TTTGAAACACCCCGTGTTGTCCAGTATACCTTATAACACTG TTTGAAACACCCCGTGTTGTCCAGTATACCTTATAACACTC < 41bp 1 0.707054427543281 1 0.450327605009079 experiment 0.585891144913438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56066996 chr7:56067016 . . 0 41 hm5C_associated_SNPs_7298 0 0 14 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:56066994-56067016
64251 chr7 56067641 56067641 1 + A G rs1802100 56067640 + 56067620 56067660 41 CATGTTGAGATTTAAATTGGCATAAAGCTGCATACTTTTTG CATGTTGAGATTTAAATTGGCGTAAAGCTGCATACTTTTTG < 41bp 1 0.436328451583813 1 0.0660594701766968 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067640 chr7:56067641 . . 0 22 hm5C_associated_SNPs_7299 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:56067466-56067860
64251 chr7 56129511 56129511 1 + A G rs4927 56129510 + 56129490 56129530 41 TCAAGCAGAACATTCAGAATCAGGTCAGCTTGTGGGTGTGG TCAAGCAGAACATTCAGAATCGGGTCAGCTTGTGGGTGTGG < 41bp 1 0.635602970000093 1 0.27081835269928 experiment 0.728794059999815 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56129510 chr7:56129511 synonymous SNV . 0 22 hm5C_associated_SNPs_7300 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:56129446-56129518
64251 chr7 56136270 56136270 1 + C T rs150976522 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CCAGACAGCAGAGATGGTGACGGGCCTGTGTGGGAGGCGAC < 41bp 1 0.551462168012226 1 0.62284117937088 experiment 0.897075663975548 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136270 nonsynonymous SNV 0.718 4 31 hm5C_associated_SNPs_7301 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr7:56136249-56136270
64251 chr7 64383794 64383794 1 + C T rs116865469 64383811 + 64383791 64383831 41 TTACTGCAACCTCTGCCCCTCGGGATTCAAGTGATTCTACT TTATTGCAACCTCTGCCCCTCGGGATTCAAGTGATTCTACT < 41bp 1 0.647008739051287 1 0.828400611877441 experiment 0.705982521897427 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF273 ENSG00000198039 UTR3 Human protein_coding chr7:64383811 chr7:64383794 . . 0 4 hm5C_associated_SNPs_7302 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:64383785-64383817
64251 chr7 64531396 64531396 1 + T C rs571007451 64531408 + 64531388 64531428 41 GCATTTGCTGATGCGTTGCTCGTTATTCCCAAGGTGTGTAT GCATTTGCCGATGCGTTGCTCGTTATTCCCAAGGTGTGTAT < 41bp 1 0.442786586016807 1 0.064691960811615 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64531408 chr7:64531396 . . 0 9 hm5C_associated_SNPs_7303 0 0 2 PPIG POSTAR2 ENCODE chr7:64531372-64531419
64251 chr7 64531401 64531401 1 + C A rs184482762 64531408 + 64531388 64531428 41 GCATTTGCTGATGCGTTGCTCGTTATTCCCAAGGTGTGTAT GCATTTGCTGATGAGTTGCTCGTTATTCCCAAGGTGTGTAT < 41bp 1 0.418818049309363 1 0.0737591981887817 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64531408 chr7:64531401 . . 0 14 hm5C_associated_SNPs_7304 0 0 2 PPIG POSTAR2 ENCODE chr7:64531372-64531419
64251 chr7 65617595 65617595 1 + T C rs875971 65617613 + 65617593 65617633 41 TGTGCTTGAAAGATTTCCTCCACGGCCTTTGCCCCAGTTGT TGCGCTTGAAAGATTTCCTCCACGGCCTTTGCCCCAGTTGT < 41bp 1 0.517671983058386 1 0.647464156150818 experiment 0.964656033883227 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65617613 chr7:65617595 . . 0 3 hm5C_associated_SNPs_7305 0 1 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:65617532-65617597
64251 chr7 65619232 65619232 1 + T C rs117490174 65619234 + 65619214 65619254 41 GTGCAGTGGCACGATCTCTGCTCACTGCAACCTCTGCCTCC GTGCAGTGGCACGATCTCCGCTCACTGCAACCTCTGCCTCC < 41bp 1 0.378881646586111 1 0.0305748283863068 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619234 chr7:65619232 . . 0 19 hm5C_associated_SNPs_7306 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619236 + 65619216 65619256 41 GCAGTGGCACGATCTCTGCTCACTGCAACCTCTGCCTCCCA GCAGTGGCACGATCTCCGCTCACTGCAACCTCTGCCTCCCA < 41bp 1 0.362180192499414 1 0.0286381244659424 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619236 chr7:65619232 . . 0 17 hm5C_associated_SNPs_7307 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619241 + 65619221 65619261 41 GGCACGATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTC GGCACGATCTCCGCTCACTGCAACCTCTGCCTCCCAGATTC < 41bp 1 0.384606932160043 1 0.257678896188736 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619241 chr7:65619232 . . 0 12 hm5C_associated_SNPs_7308 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619244 + 65619224 65619264 41 ACGATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAG ACGATCTCCGCTCACTGCAACCTCTGCCTCCCAGATTCAAG < 41bp 1 0.0482712288080039 1 0.0468804240226746 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619244 chr7:65619232 . . 0 9 hm5C_associated_SNPs_7309 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619245 + 65619225 65619265 41 CGATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAGC CGATCTCCGCTCACTGCAACCTCTGCCTCCCAGATTCAAGC < 41bp 1 0.268705295637754 1 0.114181399345398 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619245 chr7:65619232 . . 0 8 hm5C_associated_SNPs_7310 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619247 + 65619227 65619267 41 ATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGA ATCTCCGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGA < 41bp 1 0.477318073855021 1 0.0683583319187164 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619247 chr7:65619232 . . 0 6 hm5C_associated_SNPs_7311 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619250 + 65619230 65619270 41 TCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGATTC TCCGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGATTC < 41bp 1 0.0338574493207589 1 0.0237378478050232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619250 chr7:65619232 . . 0 3 hm5C_associated_SNPs_7312 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619232 65619232 1 + T C rs117490174 65619251 + 65619231 65619271 41 CTGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGATTCT CCGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCGATTCT < 41bp 1 0.245526226861486 1 0.234632879495621 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619251 chr7:65619232 . . 0 2 hm5C_associated_SNPs_7313 0 0 2 UPF1 POSTAR2 ENCODE chr7:65619188-65619235
64251 chr7 65619290 65619290 1 + G A rs187467471 65619276 + 65619256 65619296 41 AGATTCAAGCGATTCTGGTGCCTTAGCCTCCTGAGTAGCTG AGATTCAAGCGATTCTGGTGCCTTAGCCTCCTGAATAGCTG < 41bp 1 0.112826492716396 1 0.0489128232002258 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619276 chr7:65619290 . . 0 35 hm5C_associated_SNPs_7314 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 65619290 65619290 1 + G A rs187467471 65619277 + 65619257 65619297 41 GATTCAAGCGATTCTGGTGCCTTAGCCTCCTGAGTAGCTGG GATTCAAGCGATTCTGGTGCCTTAGCCTCCTGAATAGCTGG < 41bp 1 0.30952497600613 1 0.113208204507828 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619277 chr7:65619290 . . 0 34 hm5C_associated_SNPs_7315 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 65619290 65619290 1 + G A rs187467471 65619282 + 65619262 65619302 41 AAGCGATTCTGGTGCCTTAGCCTCCTGAGTAGCTGGGACTT AAGCGATTCTGGTGCCTTAGCCTCCTGAATAGCTGGGACTT < 41bp 1 0.107701599898098 1 0.426882296800613 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619282 chr7:65619290 . . 0 29 hm5C_associated_SNPs_7316 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 65619290 65619290 1 + G A rs187467471 65619283 + 65619263 65619303 41 AGCGATTCTGGTGCCTTAGCCTCCTGAGTAGCTGGGACTTA AGCGATTCTGGTGCCTTAGCCTCCTGAATAGCTGGGACTTA < 41bp 1 0.46195756478394 1 0.682980835437775 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619283 chr7:65619290 . . 0 28 hm5C_associated_SNPs_7317 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 65619290 65619290 1 + G A rs187467471 65619285 + 65619265 65619305 41 CGATTCTGGTGCCTTAGCCTCCTGAGTAGCTGGGACTTACA CGATTCTGGTGCCTTAGCCTCCTGAATAGCTGGGACTTACA < 41bp 1 0.324786960230852 1 0.357509255409241 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619285 chr7:65619290 . . 0 26 hm5C_associated_SNPs_7318 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 65619290 65619290 1 + G A rs187467471 65619286 + 65619266 65619306 41 GATTCTGGTGCCTTAGCCTCCTGAGTAGCTGGGACTTACAG GATTCTGGTGCCTTAGCCTCCTGAATAGCTGGGACTTACAG < 41bp 1 0.739242437325096 1 0.467541605234146 experiment 0.521515125349809 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65619286 chr7:65619290 . . 0 25 hm5C_associated_SNPs_7319 0 0 3 RBM27 POSTAR2 ENCODE chr7:65619277-65619314
64251 chr7 66105838 66105838 1 + A G rs115778754 66105853 + 66105833 66105873 41 AATAAATAAATTGGGGAGGACAGCCTCACTGGTATCAGACT AATAAGTAAATTGGGGAGGACAGCCTCACTGGTATCAGACT < 41bp 1 0.256660943760049 1 0.233879178762436 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD7 ENSG00000243335 UTR3 Human protein_coding chr7:66105853 chr7:66105838 . . 0 6 hm5C_associated_SNPs_7321 1 0 1 UPF1 POSTAR2 ENCODE chr7:66105837-66105899
64251 chr7 69064650 69064650 1 + C T rs200189077 69064669 + 69064649 69064689 41 CCGACGCGGGGCCATGGACTCCGCAAAAAGCGGCGGTCGCG CTGACGCGGGGCCATGGACTCCGCAAAAAGCGGCGGTCGCG < 41bp 1 0.603973342060309 1 0.353708922863007 experiment 0.792053315879383 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:69064669 chr7:69064650 nonsynonymous SNV 0.995 4 2 hm5C_associated_SNPs_7323 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:69064618-69064661
64251 chr7 69064650 69064650 1 + C T rs200189077 69064670 + 69064650 69064690 41 CGACGCGGGGCCATGGACTCCGCAAAAAGCGGCGGTCGCGG TGACGCGGGGCCATGGACTCCGCAAAAAGCGGCGGTCGCGG < 41bp 1 0.564224596118853 1 0.718036890029907 experiment 0.871550807762294 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:69064670 chr7:69064650 nonsynonymous SNV 0.995 4 1 hm5C_associated_SNPs_7324 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:69064618-69064661
64251 chr7 72419008 72419008 1 - G C rs17145837 72419023 - 72419003 72419043 41 GCACACCGCCTTGCACATAGCAGAGGCTCCGGGCTCACTCC GCACACCGCCTTGCACATAGCAGAGGCTCCGGGCTGACTCC < 41bp 1 0.741096859993003 1 0.775362491607666 experiment 0.517806280013993 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control POM121 ENSG00000196313 CDS Human protein_coding chr7:72419023 chr7:72419008 stoploss 0.004 0 36 hm5C_associated_SNPs_7327 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:72418983-72419042
64251 chr7 72419836 72419836 1 + C G rs200449002 72419817 + 72419797 72419837 41 GTCTAAGCTGCTGTGGACCTCTGAGTCCCTCAGCCACGCCT GTCTAAGCTGCTGTGGACCTCTGAGTCCCTCAGCCACGCGT < 41bp 1 0.552486965441769 1 0.406925052404404 experiment 0.895026069116462 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSUN5P2 ENSG00000106133 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr7:72419817 chr7:72419836 . . 0 40 hm5C_associated_SNPs_7328 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:72419800-72419838
64251 chr7 73536478 73536478 1 + C T rs573967711 73536461 + 73536441 73536481 41 CTCAGCCCCTGCAGTCATCTCAGAGCCCCTTCCCGGGCCTC CTCAGCCCCTGCAGTCATCTCAGAGCCCCTTCCCGGGTCTC < 41bp 1 0.547170099278433 1 0.880949795246124 experiment 0.905659801443133 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control LIMK1 ENSG00000106683 UTR3 Human protein_coding chr7:73536461 chr7:73536478 . . 0 38 hm5C_associated_SNPs_7329 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:73536456-73536490
64251 chr7 73818525 73818525 1 + C T rs534318940 73818517 + 73818497 73818537 41 GAAGGAGCTGCCCTGAGGACCATCTTAGCGGCCCTGTCCTC GAAGGAGCTGCCCTGAGGACCATCTTAGTGGCCCTGTCCTC < 41bp 1 0.112974568044433 1 0.0727452039718628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLIP2 ENSG00000106665 UTR3 Human protein_coding chr7:73818517 chr7:73818525 . . 0 29 hm5C_associated_SNPs_7344 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:73818514-73818569
64251 chr7 73969541 73969541 1 + A G rs2301895 73969540 + 73969520 73969560 41 GAGGGAGTCAAAGAGCCCATCATGGATAGTCAAGGTACCCA GAGGGAGTCAAAGAGCCCATCGTGGATAGTCAAGGTACCCA < 41bp 1 0.456456612091031 1 0.309753596782684 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73969540 chr7:73969541 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_7345 0 0 1 PRPF8 POSTAR2 ENCODE chr7:73969535-73969590
64251 chr7 75573180 75573180 1 + T C rs578185736 75573189 + 75573169 75573209 41 TTGCAGGAAAGTCCAAAGGGCTGCGCGTCTCCTGTGGCTCA TTGCAGGAAAGCCCAAAGGGCTGCGCGTCTCCTGTGGCTCA < 41bp 1 0.410712014278695 1 0.0757639408111572 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA14A ENSG00000201643 ncRNA_exonic Human snoRNA chr7:75573189 chr7:75573180 . . 0 12 hm5C_associated_SNPs_7347 0 0 16 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:75573140-75573180
64251 chr7 75573180 75573180 1 + T C rs578185736 75573197 + 75573177 75573217 41 AAGTCCAAAGGGCTGCGCGTCTCCTGTGGCTCAGTCTTATT AAGCCCAAAGGGCTGCGCGTCTCCTGTGGCTCAGTCTTATT < 41bp 1 0.240811773551579 1 0.497926890850067 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA14A ENSG00000201643 ncRNA_exonic Human snoRNA chr7:75573197 chr7:75573180 . . 0 4 hm5C_associated_SNPs_7348 0 0 16 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:75573140-75573180
64251 chr7 75615978 75615978 1 + G A rs184275273 75615958 + 75615938 75615978 41 GGTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCCACCG GGTGCATCCTCCTCAGCCCCCAGGCCAGGTGAGGTCCACCA < 41bp 1 0.663772936553082 1 0.890208065509796 experiment 0.672454126893836 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POR ENSG00000127948 UTR3 Human protein_coding chr7:75615958 chr7:75615978 . . 0 41 hm5C_associated_SNPs_7349 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75615941-75615989
64251 chr7 75932065 75932065 1 + G C rs145369859 75932069 + 75932049 75932089 41 CCTTCTCGCTCCTGCGGGGCCCCAGCTGGGACCCCTTCCGC CCTTCTCGCTCCTGCGCGGCCCCAGCTGGGACCCCTTCCGC < 41bp 1 0.603230566430537 1 0.682890892028809 experiment 0.793538867138926 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932069 chr7:75932065 synonymous SNV . 0 17 hm5C_associated_SNPs_7353 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75932065 75932065 1 + G C rs145369859 75932070 + 75932050 75932090 41 CTTCTCGCTCCTGCGGGGCCCCAGCTGGGACCCCTTCCGCG CTTCTCGCTCCTGCGCGGCCCCAGCTGGGACCCCTTCCGCG < 41bp 1 0.383947721959672 1 0.464451730251312 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932070 chr7:75932065 synonymous SNV . 0 16 hm5C_associated_SNPs_7354 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75932065 75932065 1 + G C rs145369859 75932080 + 75932060 75932100 41 CTGCGGGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCC CTGCGCGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCC < 41bp 1 0.234063248935476 1 0.0690224766731262 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932080 chr7:75932065 synonymous SNV . 0 6 hm5C_associated_SNPs_7355 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75932065 75932065 1 + G C rs145369859 75932081 + 75932061 75932101 41 TGCGGGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCG TGCGCGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCG < 41bp 1 0.113195888134568 1 0.0494332909584045 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932081 chr7:75932065 synonymous SNV . 0 5 hm5C_associated_SNPs_7356 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75932065 75932065 1 + G C rs145369859 75932082 + 75932062 75932102 41 GCGGGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCGC GCGCGGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCGC < 41bp 1 0.0896510472988823 1 0.215181767940521 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932082 chr7:75932065 synonymous SNV . 0 4 hm5C_associated_SNPs_7357 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75933439 75933439 1 + C T rs528301561 75933438 + 75933418 75933458 41 AGTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAG AGTCACCTTCGAGTCGCGGGCTCAGCTTGGGGGCCCAGAAG < 41bp 1 0.517871576045554 1 0.305636882781982 experiment 0.964256847908891 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933438 chr7:75933439 synonymous SNV . 0 22 hm5C_associated_SNPs_7358 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933439 75933439 1 + C T rs528301561 75933440 + 75933420 75933460 41 TCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGCT TCACCTTCGAGTCGCGGGCTCAGCTTGGGGGCCCAGAAGCT < 41bp 1 0.551622704723691 1 0.318273693323135 experiment 0.896754590552618 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933440 chr7:75933439 synonymous SNV . 0 20 hm5C_associated_SNPs_7359 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933439 75933439 1 + C T rs528301561 75933451 + 75933431 75933471 41 TCGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGA TCGCGGGCTCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGA < 41bp 1 0.147098378884744 1 0.0977120399475098 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933451 chr7:75933439 synonymous SNV . 0 9 hm5C_associated_SNPs_7360 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933439 75933439 1 + C T rs528301561 75933452 + 75933432 75933472 41 CGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGAT CGCGGGCTCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGAT < 41bp 1 0.393483763179709 1 0.174637913703918 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933452 chr7:75933439 synonymous SNV . 0 8 hm5C_associated_SNPs_7361 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933439 75933439 1 + C T rs528301561 75933453 + 75933433 75933473 41 GCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGATG GCGGGCTCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGATG < 41bp 1 0.784200377875339 1 0.554097175598145 experiment 0.431599244249321 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933453 chr7:75933439 synonymous SNV . 0 7 hm5C_associated_SNPs_7362 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933445 75933445 1 + T C rs34771861 75933438 + 75933418 75933458 41 AGTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAG AGTCACCTTCGAGTCGCGGGCCCAGCTCGGGGGCCCAGAAG < 41bp 1 0.293637658827655 1 0.133470565080643 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933438 chr7:75933445 synonymous SNV . 0 28 hm5C_associated_SNPs_7363 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933445 75933445 1 + T C rs34771861 75933439 + 75933419 75933459 41 GTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGC GTCACCTTCGAGTCGCGGGCCCAGCTCGGGGGCCCAGAAGC < 41bp 1 0.237907845492159 1 0.163550227880478 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933439 chr7:75933445 synonymous SNV . 0 27 hm5C_associated_SNPs_7364 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933445 75933445 1 + T C rs34771861 75933440 + 75933420 75933460 41 TCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGCT TCACCTTCGAGTCGCGGGCCCAGCTCGGGGGCCCAGAAGCT < 41bp 1 0.413866829495371 1 0.144197732210159 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933440 chr7:75933445 synonymous SNV . 0 26 hm5C_associated_SNPs_7365 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933445 75933445 1 + T C rs34771861 75933451 + 75933431 75933471 41 TCGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGA TCGCGGGCCCAGCTCGGGGGCCCAGAAGCTGCAAAATCCGA < 41bp 1 0.141106160086447 1 0.117381304502487 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933451 chr7:75933445 synonymous SNV . 0 15 hm5C_associated_SNPs_7366 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933445 75933445 1 + T C rs34771861 75933452 + 75933432 75933472 41 CGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGAT CGCGGGCCCAGCTCGGGGGCCCAGAAGCTGCAAAATCCGAT < 41bp 1 0.364289535422199 1 0.138187021017075 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933452 chr7:75933445 synonymous SNV . 0 14 hm5C_associated_SNPs_7367 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 76112199 76112199 1 + C T rs148430404 76112193 + 76112173 76112213 41 GAACTGGCCCCGTGTCAGGCCGCTACCGCCACTCCATGACC GAACTGGCCCCGTGTCAGGCCGCTACTGCCACTCCATGACC < 41bp 1 0.504156831027981 1 0.0905680060386658 experiment 0.991686337944038 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112193 chr7:76112199 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_7368 0 0 2 RBM15 POSTAR2 ENCODE chr7:76112147-76112204
64251 chr7 76256523 76256523 1 + G A rs558389190 76256529 + 76256509 76256549 41 TGACACTCGCTATCGGCCGCCGCCGCTCGCCTGCTCCAGCC TGACACTCGCTATCAGCCGCCGCCGCTCGCCTGCTCCAGCC < 41bp 1 0.716731828897311 1 0.385553747415543 experiment 0.566536342205377 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC100133091 ENSG00000205485 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:76256529 chr7:76256523 . . 0 15 hm5C_associated_SNPs_7369 0 0 1 SLTM POSTAR2 ENCODE chr7:76256491-76256524
64251 chr7 77256319 77256319 1 + C T rs114128568 77256320 + 77256300 77256340 41 GTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAA GTTTTGAGATTAAGAAGGTTCCTCTCCAAGAGGGACCAAAA < 41bp 1 0.0427521724248908 1 0.043861985206604 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256320 chr7:77256319 synonymous SNV . 0 20 hm5C_associated_SNPs_7370 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256319 77256319 1 + C T rs114128568 77256321 + 77256301 77256341 41 TTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAAA TTTTGAGATTAAGAAGGTTCCTCTCCAAGAGGGACCAAAAA < 41bp 1 0.1238329704658 1 0.0571072101593018 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256321 chr7:77256319 synonymous SNV . 0 19 hm5C_associated_SNPs_7371 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256319 77256319 1 + C T rs114128568 77256335 + 77256315 77256355 41 AGGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC AGGTTCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC < 41bp 1 0.0954674461842243 1 0.276238083839417 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256335 chr7:77256319 synonymous SNV . 0 5 hm5C_associated_SNPs_7372 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256319 77256319 1 + C T rs114128568 77256336 + 77256316 77256356 41 GGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA GGTTCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA < 41bp 1 0.23493518778604 1 0.530792236328125 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256336 chr7:77256319 synonymous SNV . 0 4 hm5C_associated_SNPs_7373 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77539625 77539625 1 + T C rs61736552 77539642 + 77539622 77539662 41 AGATAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA AGACAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA < 41bp 1 0.247385888598772 1 0.174306452274323 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77539642 chr7:77539625 synonymous SNV . 0 4 hm5C_associated_SNPs_7374 0 0 2 BUD13 POSTAR2 ENCODE chr7:77539538-77539662
64251 chr7 79089309 79089309 1 + G T rs559591922 79089310 + 79089290 79089330 41 GTTTATAGCAGCTAAGTTTGCATGAAAACACCAGGGCTGTT GTTTATAGCAGCTAAGTTTTCATGAAAACACCAGGGCTGTT < 41bp 1 0.581912106087988 1 0.467082411050797 experiment 0.836175787824023 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAGI2-AS3 ENSG00000234456 ncRNA_exonic Human processed_transcript chr7:79089310 chr7:79089309 . . 0 20 hm5C_associated_SNPs_7375 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:79089300-79089320
64251 chr7 79089328 79089328 1 + G A rs78147910 79089310 + 79089290 79089330 41 GTTTATAGCAGCTAAGTTTGCATGAAAACACCAGGGCTGTT GTTTATAGCAGCTAAGTTTGCATGAAAACACCAGGGCTATT < 41bp 1 0.505288311245097 1 0.320528864860535 experiment 0.989423377509806 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAGI2-AS3 ENSG00000234456 ncRNA_exonic Human processed_transcript chr7:79089310 chr7:79089328 . . 0 39 hm5C_associated_SNPs_7376 0 0 2 DGCR8 POSTAR2 ENCODE chr7:79089318-79089387
64251 chr7 79842157 79842157 1 + T C rs10241877 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATCAAAAAGAGCCCCCTCACTATATGCTATCCAG < 41bp 1 0.0523136022493544 1 0.0699186027050018 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842157 synonymous SNV . 0 22 hm5C_associated_SNPs_7377 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr7 87505575 87505575 1 - C A rs192771636 87505590 - 87505570 87505610 41 TTGCTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCGCCGCT TTGCTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCTCCGCT < 41bp 1 0.721047511867651 1 0.603455781936646 experiment 0.557904976264699 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBF4;SLC25A40 ENSG00000006634;ENSG00000075303 UTR5 Human other chr7:87505590 chr7:87505575 . . 0 36 hm5C_associated_SNPs_7378 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:87505568-87505592
64251 chr7 87505575 87505575 1 - C A rs192771636 87505595 - 87505575 87505615 41 TTCCGTTGCTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCG TTCCGTTGCTCTCTCAGTCTCAGACCCGGGCTCTCGGTCCT < 41bp 1 0.61286310613823 1 0.504306554794312 experiment 0.774273787723541 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBF4;SLC25A40 ENSG00000006634;ENSG00000075303 UTR5 Human other chr7:87505595 chr7:87505575 . . 0 41 hm5C_associated_SNPs_7379 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:87505568-87505592
64251 chr7 90043756 90043756 1 + T C rs571569072 90043743 + 90043723 90043763 41 ATTTCCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGT ATTTCCTTGAGCATATATCTCTGCCTAACACTTCAGTAGGT < 41bp 1 0.579015625514597 1 0.20002606511116 experiment 0.841968748970807 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043743 chr7:90043756 . . 0 34 hm5C_associated_SNPs_7380 0 0 15 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:90043680-90043760
64251 chr7 90043756 90043756 1 + T C rs571569072 90043746 + 90043726 90043766 41 TCCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGCT TCCTTGAGCATATATCTCTGCCTAACACTTCAGTAGGTGCT < 41bp 1 0.113288798318074 1 0.0665393173694611 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043746 chr7:90043756 . . 0 31 hm5C_associated_SNPs_7381 0 0 15 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:90043680-90043760
64251 chr7 90043756 90043756 1 + T C rs571569072 90043747 + 90043727 90043767 41 CCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGCTA CCTTGAGCATATATCTCTGCCTAACACTTCAGTAGGTGCTA < 41bp 1 0.272422261973018 1 0.0492574870586395 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043747 chr7:90043756 . . 0 30 hm5C_associated_SNPs_7382 0 0 15 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:90043680-90043760
64251 chr7 90043756 90043756 1 + T C rs571569072 90043751 + 90043731 90043771 41 GAGCATATATCTCTGCCTAACACTTTAGTAGGTGCTATAGA GAGCATATATCTCTGCCTAACACTTCAGTAGGTGCTATAGA < 41bp 1 0.246624807285957 1 0.128095090389252 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043751 chr7:90043756 . . 0 26 hm5C_associated_SNPs_7383 0 0 15 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:90043680-90043760
64251 chr7 90043765 90043765 1 + C T rs556714945 90043746 + 90043726 90043766 41 TCCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGCT TCCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGTT < 41bp 1 0.0862675571570876 1 0.044061690568924 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043746 chr7:90043765 . . 0 40 hm5C_associated_SNPs_7384 0 0 10 MOV10 POSTAR2 GSE37524,GSM921128 chr7:90043733-90043780
64251 chr7 90043765 90043765 1 + C T rs556714945 90043747 + 90043727 90043767 41 CCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGCTA CCTTGAGCATATATCTCTGCCTAACACTTTAGTAGGTGTTA < 41bp 1 0.223555170901711 1 0.0354544520378113 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043747 chr7:90043765 . . 0 39 hm5C_associated_SNPs_7385 0 0 10 MOV10 POSTAR2 GSE37524,GSM921128 chr7:90043733-90043780
64251 chr7 90043765 90043765 1 + C T rs556714945 90043751 + 90043731 90043771 41 GAGCATATATCTCTGCCTAACACTTTAGTAGGTGCTATAGA GAGCATATATCTCTGCCTAACACTTTAGTAGGTGTTATAGA < 41bp 1 0.29416165568795 1 0.0796098113059998 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLDN12 ENSG00000273299 ncRNA_intronic Human processed_transcript chr7:90043751 chr7:90043765 . . 0 35 hm5C_associated_SNPs_7386 0 0 10 MOV10 POSTAR2 GSE37524,GSM921128 chr7:90043733-90043780
64251 chr7 91622303 91622303 1 + G C rs144888041 91622287 + 91622267 91622307 41 GATGATGGAAAGTGAGTTGGCTGGGAAGCAGCATGAGATTG GATGATGGAAAGTGAGTTGGCTGGGAAGCAGCATGACATTG < 41bp 1 0.756888487194438 1 0.393604457378387 experiment 0.486223025611124 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622287 chr7:91622303 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_7388 5 0 10 AARS POSTAR2 ENCODE chr7:91622270-91622361
64251 chr7 91622303 91622303 1 + G C rs144888041 91622295 + 91622275 91622315 41 AAAGTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCTA AAAGTGAGTTGGCTGGGAAGCAGCATGACATTGAAGAGCTA < 41bp 1 0.676723176405635 1 0.727997422218323 experiment 0.646553647188731 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622295 chr7:91622303 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_7389 5 0 10 AARS POSTAR2 ENCODE chr7:91622270-91622361
64251 chr7 91622303 91622303 1 + G C rs144888041 91622298 + 91622278 91622318 41 GTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCTAAAC GTGAGTTGGCTGGGAAGCAGCATGACATTGAAGAGCTAAAC < 41bp 1 0.430714280703727 1 0.447132378816605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622298 chr7:91622303 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_7390 5 0 10 AARS POSTAR2 ENCODE chr7:91622270-91622361
64251 chr7 92020515 92020515 1 + G A rs79306962 92020521 + 92020501 92020541 41 GAAGACCTTGCCCAGAAAGTCAATAGGCCTTACCTTCGCAC GAAGACCTTGCCCAAAAAGTCAATAGGCCTTACCTTCGCAC < 41bp 1 0.554015248530558 1 0.251896888017654 experiment 0.891969502938885 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92020521 chr7:92020515 synonymous SNV . 0 15 hm5C_associated_SNPs_7396 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:92020487-92020525
64251 chr7 92077139 92077139 1 + T C rs532003876 92077127 + 92077107 92077147 41 AAGGGAGCGCAGGGGGAGATCCTCTGCCATCATTGCACTGG AAGGGAGCGCAGGGGGAGATCCTCTGCCATCACTGCACTGG < 41bp 1 0.330823224572226 1 0.236449986696243 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92077127 chr7:92077139 synonymous SNV . 0 33 hm5C_associated_SNPs_7397 0 0 5 GEMIN5 POSTAR2 ENCODE chr7:92077085-92077234
64251 chr7 92086403 92086403 1 + G T rs143316680 92086390 + 92086370 92086410 41 GGCTGAGGCAGGAGAATCGCCTAAACCCAGGAGGTGGAGGT GGCTGAGGCAGGAGAATCGCCTAAACCCAGGAGTTGGAGGT < 41bp 1 0.706939976421114 1 0.370409965515137 experiment 0.586120047157772 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GATAD1 ENSG00000157259 UTR3 Human protein_coding chr7:92086390 chr7:92086403 . . 0 34 hm5C_associated_SNPs_7399 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:92086389-92086424
64251 chr7 92086408 92086408 1 + G T rs189237292 92086390 + 92086370 92086410 41 GGCTGAGGCAGGAGAATCGCCTAAACCCAGGAGGTGGAGGT GGCTGAGGCAGGAGAATCGCCTAAACCCAGGAGGTGGATGT < 41bp 1 0.724180615232495 1 0.164016723632812 experiment 0.551638769535009 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GATAD1 ENSG00000157259 UTR3 Human protein_coding chr7:92086390 chr7:92086408 . . 0 39 hm5C_associated_SNPs_7400 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:92086389-92086424
64251 chr7 94294207 94294207 1 + G A rs148037544 94294196 + 94294176 94294216 41 TCTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAG TCTCCATTCTTCCCTGTCGTCCTAGGGGTTCACTGGCTGAG < 41bp 1 0.130021621978397 1 0.154942095279694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294196 chr7:94294207 . 0.867 2 32 hm5C_associated_SNPs_7402 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr7:94294157-94294316
64251 chr7 94294207 94294207 1 + G A rs148037544 94294197 + 94294177 94294217 41 CTCCATTCTTCCCTGTCGTCCTAGGGGTTCGCTGGCTGAGC CTCCATTCTTCCCTGTCGTCCTAGGGGTTCACTGGCTGAGC < 41bp 1 0.553463579135009 1 0.637901186943054 experiment 0.893072841729983 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294197 chr7:94294207 . 0.867 2 31 hm5C_associated_SNPs_7403 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr7:94294157-94294316
64251 chr7 94294798 94294798 1 + C T rs182259108 94294785 + 94294765 94294805 41 TACCTGGATACCAAACATACCCCACATATGCCGCGTACCCG TACCTGGATACCAAACATACCCCACATATGCCGTGTACCCG < 41bp 1 0.0615838064563617 1 0.10614949464798 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294785 chr7:94294798 . 0.002 0 34 hm5C_associated_SNPs_7404 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:94294749-94294843
64251 chr7 94294798 94294798 1 + C T rs182259108 94294789 + 94294769 94294809 41 TGGATACCAAACATACCCCACATATGCCGCGTACCCGACCT TGGATACCAAACATACCCCACATATGCCGTGTACCCGACCT < 41bp 1 0.0648619151231879 1 0.0180196762084961 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294789 chr7:94294798 . 0.002 0 30 hm5C_associated_SNPs_7405 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:94294749-94294843
64251 chr7 97822931 97822931 1 + G A rs200084646 97822929 + 97822909 97822949 41 GCATCCCGCTCCCGAGGGCACCGCAGACTCAGAACCAGCCA GCATCCCGCTCCCGAGGGCACCACAGACTCAGAACCAGCCA < 41bp 1 0.46332915026724 1 0.0665788054466248 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822929 chr7:97822931 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_7406 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:97822920-97822940
64251 chr7 97838327 97838327 1 + A G rs4318996 97838342 + 97838322 97838362 41 TCCTTAACTCAGCCCATCATCTGAAAATTCAGAAGTGAACC TCCTTGACTCAGCCCATCATCTGAAAATTCAGAAGTGAACC < 41bp 1 0.6590963727375 1 0.381675630807877 experiment 0.681807254525001 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LMTK2 ENSG00000164715 UTR3 Human protein_coding chr7:97838342 chr7:97838327 . . 0 6 hm5C_associated_SNPs_7407 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr7:97838320-97838340
64251 chr7 97911020 97911020 1 + C T rs192143197 97911006 + 97910986 97911026 41 CGCGTCTGCCTCAGAGGGGCCCGAGCCACCCGGTCCGCCGC CGCGTCTGCCTCAGAGGGGCCCGAGCCACCCGGTTCGCCGC < 41bp 1 0.565331104920496 1 0.371441900730133 experiment 0.869337790159008 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control BRI3 ENSG00000164713 UTR5 Human protein_coding chr7:97911006 chr7:97911020 . . 0 35 hm5C_associated_SNPs_7408 0 0 7 DDX3X POSTAR2 ENCODE chr7:97911015-97911075
64251 chr7 97911020 97911020 1 + C T rs192143197 97911007 + 97910987 97911027 41 GCGTCTGCCTCAGAGGGGCCCGAGCCACCCGGTCCGCCGCG GCGTCTGCCTCAGAGGGGCCCGAGCCACCCGGTTCGCCGCG < 41bp 1 0.738496559907722 1 0.477851539850235 experiment 0.523006880184557 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control BRI3 ENSG00000164713 UTR5 Human protein_coding chr7:97911007 chr7:97911020 . . 0 34 hm5C_associated_SNPs_7409 0 0 7 DDX3X POSTAR2 ENCODE chr7:97911015-97911075
64251 chr7 97911020 97911020 1 + C T rs192143197 97911011 + 97910991 97911031 41 CTGCCTCAGAGGGGCCCGAGCCACCCGGTCCGCCGCGTCCC CTGCCTCAGAGGGGCCCGAGCCACCCGGTTCGCCGCGTCCC < 41bp 1 0.34467572878909 1 0.0471802651882172 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control BRI3 ENSG00000164713 UTR5 Human protein_coding chr7:97911011 chr7:97911020 . . 0 30 hm5C_associated_SNPs_7410 0 0 7 DDX3X POSTAR2 ENCODE chr7:97911015-97911075
64251 chr7 98528420 98528420 1 + A G rs113886181 98528424 + 98528404 98528444 41 AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTA AGACATTCCTGAAAGCGCTTCTCTTTGTCATGATGGACTTA < 41bp 1 0.0398584816230933 1 0.0929222106933594 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528424 chr7:98528420 synonymous SNV . 0 17 hm5C_associated_SNPs_7411 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr7 98609780 98609780 1 + G A rs75387850 98609794 + 98609774 98609814 41 TCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC TCTCTCAGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC < 41bp 1 0.329498795301472 1 0.847151756286621 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98609794 chr7:98609780 synonymous SNV . 0 7 hm5C_associated_SNPs_7412 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98609760-98609780
64251 chr7 98609783 98609783 1 + C T rs219817 98609794 + 98609774 98609814 41 TCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC TCTCTCGGCTGCCGGGCAGCCAGAGAACATGGACAGCCAGC < 41bp 1 0.32005075022844 1 0.868319988250732 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98609794 chr7:98609783 synonymous SNV . 0 10 hm5C_associated_SNPs_7413 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98609763-98609796
64251 chr7 98630650 98630650 1 - C T rs150893399 98630662 - 98630642 98630682 41 AACCTTCCGAAGGCCCATACCTGGTAAGCACCGCGGCCAGG AACCTTCCGAAGGCCCATACCTGGTAAGCACCACGGCCAGG < 41bp 1 0.667310227855243 1 0.110690146684647 experiment 0.665379544289515 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LOC101927550 ENSG00000242687 ncRNA_exonic Human antisense chr7:98630662 chr7:98630650 . . 0 33 hm5C_associated_SNPs_7414 0 0 1 PRPF8 POSTAR2 ENCODE chr7:98630617-98630682
64251 chr7 99156326 99156326 1 + C G rs376093132 99156310 + 99156290 99156330 41 GGAAGTGCCACCGAGAAGCGCCGGCCTCGGGGCTGTCTACA GGAAGTGCCACCGAGAAGCGCCGGCCTCGGGGCTGTGTACA < 41bp 1 0.42836460739525 1 0.778043210506439 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control ZNF655 ENSG00000197343;ENSG00000272647 UTR5 Human other chr7:99156310 chr7:99156326 . . 0 37 hm5C_associated_SNPs_7416 0 0 7 DDX3X POSTAR2 ENCODE chr7:99156314-99156412
64251 chr7 99159522 99159522 1 + C A rs141089610 99159535 + 99159515 99159555 41 ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC ACCTGTTACTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC < 41bp 1 0.216555265306039 1 0.144637674093246 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF655 ENSG00000197343 CDS Human protein_coding chr7:99159535 chr7:99159522 nonsynonymous SNV 0.999 0 8 hm5C_associated_SNPs_7417 0 0 4 SF3A3 POSTAR2 ENCODE chr7:99159432-99159544
64251 chr7 99172693 99172693 1 + G A rs117784619 99172684 + 99172664 99172704 41 AATGATGCCCAAGGTTTTAGCTGTCTTGTGTGCATCCACAG AATGATGCCCAAGGTTTTAGCTGTCTTGTATGCATCCACAG < 41bp 1 0.484706197527575 1 0.0545627772808075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF655 ENSG00000197343 UTR3 Human protein_coding chr7:99172684 chr7:99172693 . . 0 30 hm5C_associated_SNPs_7418 0 0 1 MBNL2 POSTAR2 GSE68890,GSM1685423 chr7:99172680-99172700
64251 chr7 99228045 99228045 1 + C T rs147049372 99228030 + 99228010 99228050 41 TTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCACCCCCT TTGCCTGCAGGGTCATAGCTCAGACTCTTCCCCCATCCCCT < 41bp 1 0.221584981089564 1 0.127175122499466 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZSCAN25 ENSG00000197037 UTR3 Human protein_coding chr7:99228030 chr7:99228045 . . 0 36 hm5C_associated_SNPs_7419 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:99228002-99228111
64251 chr7 99627504 99627504 1 + C G rs148669042 99627493 + 99627473 99627513 41 TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCC TCCTCCCCCAGCTCTTCCTGCTGCCCACATTGCTGCACCCC < 41bp 1 0.284315702830375 1 0.229211270809174 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627493 chr7:99627504 nonsynonymous SNV 0.486 2 32 hm5C_associated_SNPs_7420 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr7 99627504 99627504 1 + C G rs148669042 99627498 + 99627478 99627518 41 CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCAT CCCCAGCTCTTCCTGCTGCCCACATTGCTGCACCCCCTCAT < 41bp 1 0.567850986705861 1 0.328889906406403 experiment 0.864298026588279 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627498 chr7:99627504 nonsynonymous SNV 0.486 2 27 hm5C_associated_SNPs_7421 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr7 99627508 99627508 1 + C T rs138748181 99627493 + 99627473 99627513 41 TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCC TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGTACCCC < 41bp 1 0.228377679334543 1 0.17718106508255 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627493 chr7:99627508 nonsynonymous SNV 0.452 0 36 hm5C_associated_SNPs_7422 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr7 99627508 99627508 1 + C T rs138748181 99627498 + 99627478 99627518 41 CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCAT CCCCAGCTCTTCCTGCTGCCCACATTCCTGTACCCCCTCAT < 41bp 1 0.462030181580825 1 0.151401489973068 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627498 chr7:99627508 nonsynonymous SNV 0.452 0 31 hm5C_associated_SNPs_7423 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr7 99701297 99701297 1 + G A rs113020957 99701304 + 99701284 99701324 41 GCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGGTGAGGGAA GCCGCCCCGTCCTATCCAGTCGCTCTGACCAGGTGAGGGAA < 41bp 1 0.398284360356705 1 0.180477470159531 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99701304 chr7:99701297 synonymous SNV . 0 14 hm5C_associated_SNPs_7424 0 0 1 DDX24 POSTAR2 ENCODE chr7:99701234-99701300
64251 chr7 99725168 99725168 1 + G A rs375363658 99725178 + 99725158 99725198 41 TCCTACCCCAGACCCGGGGCCCGGCCTCCAGCCACCGAGAG TCCTACCCCAAACCCGGGGCCCGGCCTCCAGCCACCGAGAG < 41bp 1 0.371537606241688 1 0.4498091340065 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MBLAC1 ENSG00000214309 CDS Human protein_coding chr7:99725178 chr7:99725168 synonymous SNV . 0 11 hm5C_associated_SNPs_7435 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99725158-99725204
64251 chr7 99747130 99747130 1 + G A rs12878 99747129 + 99747109 99747149 41 CTTTACCCACTAGACTTCTGCGCTGACCCAGGGGCTGGAGC CTTTACCCACTAGACTTCTGCACTGACCCAGGGGCTGGAGC < 41bp 1 0.256856946398949 1 0.0466145277023315 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99747129 chr7:99747130 synonymous SNV . 0 22 hm5C_associated_SNPs_7436 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:99747120-99747140
64251 chr7 99751521 99751521 1 + G A rs11540426 99751531 + 99751511 99751551 41 TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG TGCTGGTGACAGTGTCAGGACAGAGGGTGTTTGTGGTGAAG < 41bp 1 0.643947043935416 1 0.485243827104568 experiment 0.712105912129168 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751531 chr7:99751521 synonymous SNV . 0 11 hm5C_associated_SNPs_7437 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:99751494-99751532
64251 chr7 99751576 99751576 1 + A C rs115350338 99751560 + 99751540 99751580 41 TTTGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCCCATTGA TTTGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCCCCTTGA < 41bp 1 0.72878245631799 1 0.503362715244293 experiment 0.54243508736402 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751560 chr7:99751576 nonsynonymous SNV 0.986 2 37 hm5C_associated_SNPs_7438 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:99751541-99751576
64251 chr7 100027674 100027674 1 + T C rs193002939 100027658 + 100027638 100027678 41 GGAAATGATCGAGATGGCGGCGGAGAAGGAGCCGTTTCTGG GGAAATGATCGAGATGGCGGCGGAGAAGGAGCCGTTCCTGG < 41bp 1 0.691951557295314 1 0.825570583343506 experiment 0.616096885409373 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MEPCE ENSG00000146834 CDS Human protein_coding chr7:100027658 chr7:100027674 synonymous SNV . 0 37 hm5C_associated_SNPs_7440 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:100027640-100027680
64251 chr7 100027674 100027674 1 + T C rs193002939 100027693 + 100027673 100027713 41 TTCTGGTGCCGGCCCCGCCGCCGCCGCTCAAAGATGAGTCG TCCTGGTGCCGGCCCCGCCGCCGCCGCTCAAAGATGAGTCG < 41bp 1 0.262334077546107 1 0.39101630449295 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MEPCE ENSG00000146834 CDS Human protein_coding chr7:100027693 chr7:100027674 synonymous SNV . 0 2 hm5C_associated_SNPs_7441 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:100027640-100027680
64251 chr7 100027688 100027688 1 + C G rs199973116 100027693 + 100027673 100027713 41 TTCTGGTGCCGGCCCCGCCGCCGCCGCTCAAAGATGAGTCG TTCTGGTGCCGGCCCGGCCGCCGCCGCTCAAAGATGAGTCG < 41bp 1 0.286740420319303 1 0.322893083095551 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MEPCE ENSG00000146834 CDS Human protein_coding chr7:100027693 chr7:100027688 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_7442 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:100027671-100027695
64251 chr7 100151719 100151719 1 + G A rs61742738 100151721 + 100151701 100151741 41 TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGGAC TCCTTCTCCTCCAAGCCCATCAGTCAGTCTCACGCTCGGAC < 41bp 1 0.0575716914979123 1 0.107847929000854 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100151721 chr7:100151719 nonsynonymous SNV 0.039 0 19 hm5C_associated_SNPs_7443 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100151718-100151749
64251 chr7 100200130 100200130 1 + C G rs140507217 100200134 + 100200114 100200154 41 CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGCCCAGGGC CCCTCCTCACTGCCTGGGCCCTGCTGCCTTTTGCCCAGGGC < 41bp 1 0.262702583479263 1 0.123445093631744 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100200134 chr7:100200130 nonsynonymous SNV 0.979 0 17 hm5C_associated_SNPs_7444 0 0 2 NOL12 POSTAR2 ENCODE chr7:100200074-100200139
64251 chr7 100276503 100276503 1 + G A rs145589084 100276515 + 100276495 100276535 41 GGGCTGGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGC GGGCTGGCACAATCCCAGCCCCCTTCCCCGGGCCACGGGGC < 41bp 1 0.102959407341711 1 0.0700391829013824 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276515 chr7:100276503 . . 0 9 hm5C_associated_SNPs_7445 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276503 100276503 1 + G A rs145589084 100276516 + 100276496 100276536 41 GGCTGGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGCC GGCTGGCACAATCCCAGCCCCCTTCCCCGGGCCACGGGGCC < 41bp 1 0.0278408811033776 1 0.0752622485160828 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276516 chr7:100276503 . . 0 8 hm5C_associated_SNPs_7446 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276503 100276503 1 + G A rs145589084 100276520 + 100276500 100276540 41 GGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGCCTTGG GGCACAATCCCAGCCCCCTTCCCCGGGCCACGGGGCCTTGG < 41bp 1 0.7466768094585 1 0.437374085187912 experiment 0.506646381083 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276520 chr7:100276503 . . 0 4 hm5C_associated_SNPs_7447 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276503 100276503 1 + G A rs145589084 100276522 + 100276502 100276542 41 CGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGCCTTGGGT CACAATCCCAGCCCCCTTCCCCGGGCCACGGGGCCTTGGGT < 41bp 1 0.734024426387619 1 0.853263854980469 experiment 0.531951147224763 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276522 chr7:100276503 . . 0 2 hm5C_associated_SNPs_7448 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276523 100276523 1 + C T rs371175419 100276515 + 100276495 100276535 41 GGGCTGGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGC GGGCTGGCGCAATCCCAGCCCCCTTCCCTGGGCCACGGGGC < 41bp 1 0.126800849687046 1 0.179474145174026 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276515 chr7:100276523 . . 0 29 hm5C_associated_SNPs_7449 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276523 100276523 1 + C T rs371175419 100276516 + 100276496 100276536 41 GGCTGGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGCC GGCTGGCGCAATCCCAGCCCCCTTCCCTGGGCCACGGGGCC < 41bp 1 0.0277730641471255 1 0.128532528877258 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276516 chr7:100276523 . . 0 28 hm5C_associated_SNPs_7450 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100276523 100276523 1 + C T rs371175419 100276520 + 100276500 100276540 41 GGCGCAATCCCAGCCCCCTTCCCCGGGCCACGGGGCCTTGG GGCGCAATCCCAGCCCCCTTCCCTGGGCCACGGGGCCTTGG < 41bp 1 0.560997994042199 1 0.260633707046509 experiment 0.878004011915601 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNB2 ENSG00000172354 UTR3 Human protein_coding chr7:100276520 chr7:100276523 . . 0 24 hm5C_associated_SNPs_7451 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100276464-100276526
64251 chr7 100303792 100303792 1 + T C rs148149252 100303809 + 100303789 100303829 41 AGCTGGCTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGG AGCCGGCTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGG < 41bp 1 0.373478045739601 1 0.0654452741146088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POP7 ENSG00000172336 UTR5 Human protein_coding chr7:100303809 chr7:100303792 . . 0 4 hm5C_associated_SNPs_7452 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:100303760-100303800
64251 chr7 100303796 100303796 1 + T C rs182037615 100303809 + 100303789 100303829 41 AGCTGGCTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGG AGCTGGCCGGCTGCTTGCACCCACATCCTTCTTTCTCTGGG < 41bp 1 0.344062497127472 1 0.131340175867081 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POP7 ENSG00000172336 UTR5 Human protein_coding chr7:100303809 chr7:100303796 . . 0 8 hm5C_associated_SNPs_7453 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:100303760-100303800
64251 chr7 100303796 100303796 1 + T C rs182037615 100303815 + 100303795 100303835 41 CTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGGACCTGG CCGGCTGCTTGCACCCACATCCTTCTTTCTCTGGGACCTGG < 41bp 1 0.0587939158448288 1 0.0281419456005096 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POP7 ENSG00000172336 UTR5 Human protein_coding chr7:100303815 chr7:100303796 . . 0 2 hm5C_associated_SNPs_7454 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:100303760-100303800
64251 chr7 100303809 100303809 1 + C T rs78597009 100303815 + 100303795 100303835 41 CTGGCTGCTTGCACCCACATCCTTCTTTCTCTGGGACCTGG CTGGCTGCTTGCACTCACATCCTTCTTTCTCTGGGACCTGG < 41bp 1 0.0523184708460182 1 0.0245530009269714 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POP7 ENSG00000172336 UTR5 Human protein_coding chr7:100303815 chr7:100303809 . . 0 15 hm5C_associated_SNPs_7455 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:100303786-100303820
64251 chr7 100484529 100484529 1 + G A rs572548566 100484519 + 100484499 100484539 41 GGGGAGCAGCGGGGGCGCTCCTCCTGAGGAGCCTCCTAAGG GGGGAGCAGCGGGGGCGCTCCTCCTGAGGAACCTCCTAAGG < 41bp 1 0.69802735373511 1 0.777493357658386 experiment 0.603945292529779 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100484519 chr7:100484529 synonymous SNV . 0 31 hm5C_associated_SNPs_7459 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100484522-100484543
64251 chr7 100731184 100731184 1 + C T rs36064566 100731170 + 100731150 100731190 41 AGTTGCTGTGCAGAGAGTGCCGCCTAGACCCCCACCTGGAC AGTTGCTGTGCAGAGAGTGCCGCCTAGACCCCCATCTGGAC < 41bp 1 0.485599176223208 1 0.15083909034729 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731170 chr7:100731184 synonymous SNV . 0 35 hm5C_associated_SNPs_7460 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100731166-100731249
64251 chr7 100731321 100731321 1 + G A rs371843986 100731332 + 100731312 100731352 41 CGCTAGCCCGGCTGCGGGAGCAGGCGGCCCGGGTGGGGACT CGCTAGCCCAGCTGCGGGAGCAGGCGGCCCGGGTGGGGACT < 41bp 1 0.641602506492997 1 0.898771524429321 experiment 0.716794987014006 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731332 chr7:100731321 nonsynonymous SNV 0.037 0 10 hm5C_associated_SNPs_7461 0 0 8 EIF3H POSTAR2 ENCODE chr7:100731294-100731339
64251 chr7 100733565 100733565 1 + A G rs10900 100733585 + 100733565 100733605 41 ATTCTCCATCGCTTCTCAGCCTTTTGGCTAAGATTAAGTAT GTTCTCCATCGCTTCTCAGCCTTTTGGCTAAGATTAAGTAT < 41bp 1 0.0639030953428266 1 0.0624144375324249 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 UTR3 Human protein_coding chr7:100733585 chr7:100733565 . . 0 1 hm5C_associated_SNPs_7462 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:100733526-100733575
64251 chr7 100733574 100733574 1 + C T rs113753117 100733585 + 100733565 100733605 41 ATTCTCCATCGCTTCTCAGCCTTTTGGCTAAGATTAAGTAT ATTCTCCATTGCTTCTCAGCCTTTTGGCTAAGATTAAGTAT < 41bp 1 0.0701389944961299 1 0.0392843186855316 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 UTR3 Human protein_coding chr7:100733585 chr7:100733574 . . 0 10 hm5C_associated_SNPs_7463 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:100733526-100733575
64251 chr7 100775153 100775153 1 + T C rs201697541 100775149 + 100775129 100775169 41 TCTTCCTGATCATTGATTTTCCCATAGGTATGATCAGCAAC TCTTCCTGATCATTGATTTTCCCACAGGTATGATCAGCAAC < 41bp 1 0.227936682104416 1 0.167938679456711 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 intronic Human protein_coding chr7:100775149 chr7:100775153 . . 0 25 hm5C_associated_SNPs_7466 0 0 1 BUD13 POSTAR2 ENCODE chr7:100775144-100775198
64251 chr7 100775153 100775153 1 + T C rs201697541 100775150 + 100775130 100775170 41 CTTCCTGATCATTGATTTTCCCATAGGTATGATCAGCAACT CTTCCTGATCATTGATTTTCCCACAGGTATGATCAGCAACT < 41bp 1 0.335712963604803 1 0.0526244342327118 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 intronic Human protein_coding chr7:100775150 chr7:100775153 . . 0 24 hm5C_associated_SNPs_7467 0 0 1 BUD13 POSTAR2 ENCODE chr7:100775144-100775198
64251 chr7 100775298 100775298 1 + C T rs2227670 100775301 + 100775281 100775321 41 CTCTTCCACAAATCAGACGGCAGCACTGTCTCTGTGCCCAT CTCTTCCACAAATCAGATGGCAGCACTGTCTCTGTGCCCAT < 41bp 1 0.55394758545135 1 0.168195784091949 experiment 0.892104829097299 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100775301 chr7:100775298 synonymous SNV . 0 18 hm5C_associated_SNPs_7468 0 0 2 SND1 POSTAR2 ENCODE chr7:100775224-100775325
64251 chr7 100803900 100803900 1 + G T rs570283203 100803910 + 100803890 100803930 41 GGCGGGAACGGCTGCTTCTCCTCTGCCCAGGGCCCTGTTCT GGCGGGAACGTCTGCTTCTCCTCTGCCCAGGGCCCTGTTCT < 41bp 1 0.645987831784576 1 0.636633038520813 experiment 0.708024336430848 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP1S1 ENSG00000106367 UTR3 Human protein_coding chr7:100803910 chr7:100803900 . . 0 11 hm5C_associated_SNPs_7469 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:100803888-100803977
64251 chr7 100804058 100804058 1 + G A rs112015844 100804062 + 100804042 100804082 41 CCCACTGAAGGTTTTAGAAGCTAGGAGGCAGGAAAATGTGA CCCACTGAAGGTTTTAAAAGCTAGGAGGCAGGAAAATGTGA < 41bp 1 0.790213480412371 1 0.423625499010086 experiment 0.419573039175258 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout AP1S1 ENSG00000106367 UTR3 Human protein_coding chr7:100804062 chr7:100804058 . . 0 17 hm5C_associated_SNPs_7470 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100803888-100804143
64251 chr7 100861475 100861475 1 + C T rs10215517 100861474 + 100861454 100861494 41 CTTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACT CTTCCGACAGTTGTGTTGTGCTAATGGTGGAGAAGAAAACT < 41bp 1 0.217668319544084 1 0.126967191696167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 UTR5 Human protein_coding chr7:100861474 chr7:100861475 . . 0 22 hm5C_associated_SNPs_7471 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:100861448-100861476
64251 chr7 100861476 100861476 1 + A G rs58033606 100861474 + 100861454 100861494 41 CTTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACT CTTCCGACAGTTGTGTTGTGCCGATGGTGGAGAAGAAAACT < 41bp 1 0.176258731468288 1 0.360364556312561 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 UTR5 Human protein_coding chr7:100861474 chr7:100861476 . . 0 23 hm5C_associated_SNPs_7472 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr7:100861448-100861476
64251 chr7 100861476 100861476 1 + A G rs58033606 100861475 + 100861455 100861495 41 TTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACTT TTCCGACAGTTGTGTTGTGCCGATGGTGGAGAAGAAAACTT < 41bp 1 0.494776661053751 1 0.710920035839081 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 UTR5 Human protein_coding chr7:100861475 chr7:100861476 . . 0 22 hm5C_associated_SNPs_7473 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr7:100861448-100861476
64251 chr7 100867227 100867227 1 + G A rs142188467 100867232 + 100867212 100867252 41 CTGCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCC CTGCAGGTGTCTGAAATGGACTGTGTGAGCCTGGGCATTCC < 41bp 1 0.666574194341048 1 0.101806789636612 experiment 0.666851611317903 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867232 chr7:100867227 synonymous SNV . 0 16 hm5C_associated_SNPs_7474 0 0 8 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 100867227 100867227 1 + G A rs142188467 100867242 + 100867222 100867262 41 CTGAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA CTGAAATGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA < 41bp 1 0.779735521175451 1 0.341002315282822 experiment 0.440528957649098 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867242 chr7:100867227 synonymous SNV . 0 6 hm5C_associated_SNPs_7475 0 0 8 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 100867240 100867240 1 + G A rs144254789 100867232 + 100867212 100867252 41 CTGCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCC CTGCAGGTGTCTGAAGTGGACTGTGTGAACCTGGGCATTCC < 41bp 1 0.671890950387505 1 0.113946288824081 experiment 0.65621809922499 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 UTR3 Human protein_coding chr7:100867232 chr7:100867240 . . 0 29 hm5C_associated_SNPs_7476 0 0 20 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 101813775 101813775 1 + C T rs189334175 101813790 + 101813770 101813810 41 GCTCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA GCTCTTATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA < 41bp 1 0.0560719841144257 1 0.74062180519104 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101813790 chr7:101813775 nonsynonymous SNV 0.992 1 6 hm5C_associated_SNPs_7477 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:101813761-101813784
64251 chr7 101813779 101813779 1 + G A rs180828525 101813790 + 101813770 101813810 41 GCTCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA GCTCTCATCAGCCAATCACTCCCTCCAGCTGGCCTCACAGA < 41bp 1 0.043123755460874 1 0.524882555007935 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101813790 chr7:101813779 synonymous SNV . 0 10 hm5C_associated_SNPs_7478 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:101813761-101813784
64251 chr7 101837149 101837149 1 + G A rs2230104 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGCACCATCCGAGGGCGCTGGGACA < 41bp 1 0.0114249808120915 1 0.213053971529007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837149 synonymous SNV . 0 23 hm5C_associated_SNPs_7479 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221662 chr7:101837148-101837149
64251 chr7 101837149 101837149 1 + G A rs2230104 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGCACCATCCGAGGGCGCTGGGACAC < 41bp 1 0.0678461133369814 1 0.359058737754822 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837149 synonymous SNV . 0 22 hm5C_associated_SNPs_7480 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221662 chr7:101837148-101837149
64251 chr7 101845115 101845115 1 + G A rs115507543 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACAGGCGGCGGGAAAGAGAAGGGCAG < 41bp 1 0.440843909687568 1 0.705779671669006 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845115 synonymous SNV . 0 18 hm5C_associated_SNPs_7481 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr7 101845119 101845119 1 + G A rs369468371 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACGGGCAGCGGGAAAGAGAAGGGCAG < 41bp 1 0.309146773020972 1 0.605080008506775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845119 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_7482 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr7 101897521 101897521 1 + A G rs10259347 101897533 + 101897513 101897553 41 TTCTGTCCAGTCCTGCTCAGCTGTTAAGATCCATCATGGCC TTCTGTCCGGTCCTGCTCAGCTGTTAAGATCCATCATGGCC < 41bp 1 0.0575483191929547 1 0.082267552614212 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUX1 ENSG00000257923 UTR3 Human protein_coding chr7:101897533 chr7:101897521 . . 0 9 hm5C_associated_SNPs_7483 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr7:101897494-101897536
64251 chr7 102066873 102066873 1 + T C rs11444 102066878 + 102066858 102066898 41 CCTGAGTCTATTTTATGCCCCTTACGTACTTTGATAGAACT CCTGAGTCTATTTTACGCCCCTTACGTACTTTGATAGAACT < 41bp 1 0.050910605991871 1 0.0389951169490814 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LOC100630923 ENSG00000128563 UTR3 Human protein_coding chr7:102066878 chr7:102066873 . . 0 16 hm5C_associated_SNPs_7486 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:102066788-102066912
64251 chr7 102944359 102944359 1 + A T rs149065163 102944354 + 102944334 102944374 41 AAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAG AAGCAGAGATTGAACGTGAGCGTGGTGTAATCCTTAGAGAG < 41bp 1 0.627831870603633 1 0.545337080955505 experiment 0.744336258792734 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMPCB ENSG00000105819 CDS Human protein_coding chr7:102944354 chr7:102944359 synonymous SNV . 0 26 hm5C_associated_SNPs_7488 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:102944334-102944367
64251 chr7 103008462 103008462 1 + C G rs200390723 103008447 + 103008427 103008467 41 TTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATT TTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCGAAATT < 41bp 1 0.160926060112369 1 0.00841262936592102 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMC2 ENSG00000161057 CDS Human protein_coding chr7:103008447 chr7:103008462 synonymous SNV . 0 36 hm5C_associated_SNPs_7489 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:103008447-103008487
64251 chr7 106791447 106791447 1 + G A rs3729878 106791445 + 106791425 106791465 41 ATGAAAGCTTTATTGAGTCACTGCCATTCCTTAAATCTTTG ATGAAAGCTTTATTGAGTCACTACCATTCCTTAAATCTTTG < 41bp 1 0.113062112486746 1 0.0503162741661072 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106791445 chr7:106791447 synonymous SNV . 0 23 hm5C_associated_SNPs_7490 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:106791416-106791447
64251 chr7 107260778 107260778 1 + G A rs2807 107260777 + 107260757 107260797 41 AAATATTGCAGTGTATTAGCCGGCTGTGGCTCCAGAGTCTG AAATATTGCAGTGTATTAGCCAGCTGTGGCTCCAGAGTCTG < 41bp 1 0.653764710694895 1 0.308243483304977 experiment 0.692470578610209 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCAP29 ENSG00000075790 UTR3 Human protein_coding chr7:107260777 chr7:107260778 . . 0 22 hm5C_associated_SNPs_7491 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr7:107260767-107260788
64251 chr7 107559722 107559722 1 + A G rs8721 107559739 + 107559719 107559759 41 TATATTTTTTTCTGAAATTTCCTGGGAGCTTTTGTAGAAGT TATGTTTTTTTCTGAAATTTCCTGGGAGCTTTTGTAGAAGT < 41bp 1 0.297516871203824 1 0.424031108617783 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DLD ENSG00000091140 UTR3 Human protein_coding chr7:107559739 chr7:107559722 . . 0 4 hm5C_associated_SNPs_7495 0 0 27 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:107559700-107559740
64251 chr7 107559732 107559732 1 + G T rs17154615 107559739 + 107559719 107559759 41 TATATTTTTTTCTGAAATTTCCTGGGAGCTTTTGTAGAAGT TATATTTTTTTCTTAAATTTCCTGGGAGCTTTTGTAGAAGT < 41bp 1 0.257030507628281 1 0.349120646715164 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DLD ENSG00000091140 UTR3 Human protein_coding chr7:107559739 chr7:107559732 . . 0 14 hm5C_associated_SNPs_7496 3 0 38 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:107559700-107559740
64251 chr7 114655779 114655779 1 + C T rs145324284 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTATCCTGGCTTGCTTGTTCTGTGAATTCCTGACCCTTTG < 41bp 1 0.586660478475986 1 0.275131940841675 experiment 0.826679043048028 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655779 synonymous SNV . 0 24 hm5C_associated_SNPs_7497 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:114655753-114655788
64251 chr7 116139718 116139718 1 + T C rs3735625 116139707 + 116139687 116139727 41 CCCACAGCGGGAAGCGGCCGCCGCCCGGGCCTCGCAGGGCT CCCACAGCGGGAAGCGGCCGCCGCCCGGGCCCCGCAGGGCT < 41bp 1 0.254940585538312 1 0.495460569858551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAV2 ENSG00000105971 UTR5 Human protein_coding chr7:116139707 chr7:116139718 . . 0 32 hm5C_associated_SNPs_7498 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:116139697-116139737
64251 chr7 116139718 116139718 1 + T C rs3735625 116139717 + 116139697 116139737 41 GAAGCGGCCGCCGCCCGGGCCTCGCAGGGCTAGGCGAGGCG GAAGCGGCCGCCGCCCGGGCCCCGCAGGGCTAGGCGAGGCG < 41bp 1 0.251924738693762 1 0.137789815664291 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAV2 ENSG00000105971 UTR5 Human protein_coding chr7:116139717 chr7:116139718 . . 0 22 hm5C_associated_SNPs_7499 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:116139697-116139737
64251 chr7 116437606 116437606 1 + G A rs1621 116437607 + 116437587 116437627 41 TCTGTGGAATTTTGTGCTTGCTACTGTATAGTGCATGTGGT TCTGTGGAATTTTGTGCTTACTACTGTATAGTGCATGTGGT < 41bp 1 0.478570962049128 1 0.111973226070404 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MET ENSG00000105976 UTR3 Human protein_coding chr7:116437607 chr7:116437606 . . 0 20 hm5C_associated_SNPs_7501 1 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr7:116437585-116437606
64251 chr7 127569261 127569261 1 + G A rs60805384 127569246 + 127569226 127569266 41 TCTTTTCTCCATCAGGATACCCAAAAAGCAAAGCAGTTCCT TCTTTTCTCCATCAGGATACCCAAAAAGCAAAGCAATTCCT < 41bp 1 0.087320875845679 1 0.300810515880585 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127569246 chr7:127569261 synonymous SNV . 0 36 hm5C_associated_SNPs_7502 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:127569253-127569285
64251 chr7 128297219 128297219 1 + G C rs149543087 128297199 + 128297179 128297219 41 GGGTAGGGGCCGTAGGGGGCCCGCTCTGCTGCCTTGACCAG GGGTAGGGGCCGTAGGGGGCCCGCTCTGCTGCCTTGACCAC < 41bp 1 0.31271486493729 1 0.0749730467796326 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LINC01000 ENSG00000271529 ncRNA_exonic Human other chr7:128297199 chr7:128297219 . . 0 41 hm5C_associated_SNPs_7509 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr7:128297200-128297220
64251 chr7 128410006 128410006 1 + A C rs553746157 128409995 + 128409975 128410015 41 AGATAGAAACAGCTGGAAAACTAAAGGAAAAATACAAGTGT AGATAGAAACAGCTGGAAAACTAAAGGAAAACTACAAGTGT < 41bp 1 0.758379361117332 1 0.717514634132385 experiment 0.483241277765336 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409995 chr7:128410006 . . 0 32 hm5C_associated_SNPs_7510 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128409960-128410020
64251 chr7 128410012 128410012 1 + G A rs1043595 128409995 + 128409975 128410015 41 AGATAGAAACAGCTGGAAAACTAAAGGAAAAATACAAGTGT AGATAGAAACAGCTGGAAAACTAAAGGAAAAATACAAATGT < 41bp 1 0.763207831986652 1 0.66016036272049 experiment 0.473584336026696 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALU ENSG00000128595 UTR3 Human protein_coding chr7:128409995 chr7:128410012 . . 0 38 hm5C_associated_SNPs_7511 0 1 35 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128409960-128410020
64251 chr7 128423508 128423508 1 + C T rs533242301 128423506 + 128423486 128423526 41 CAAGAGATAACTACCAGTGGCTCGTTGGTCTAGGGGTATGA CAAGAGATAACTACCAGTGGCTTGTTGGTCTAGGGGTATGA < 41bp 1 0.145480115744748 1 0.0652853846549988 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423506 chr7:128423508 . . 0 23 hm5C_associated_SNPs_7512 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128423476-128423519
64251 chr7 128423552 128423552 1 + C T rs147868566 128423542 + 128423522 128423562 41 TATGATTCTCGCTTAGGGTGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGGTGCGAGAGGTCCTGGGTTCAAAT < 41bp 1 0.629004691677339 1 0.608605921268463 experiment 0.741990616645323 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423542 chr7:128423552 . . 0 31 hm5C_associated_SNPs_7515 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr7:128423540-128423560
64251 chr7 128423552 128423552 1 + C T rs147868566 128423564 + 128423544 128423584 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTACTTTTTC AGAGGTCCTGGGTTCAAATCCCGGACGAGCCCTACTTTTTC < 41bp 1 0.649251640431281 1 0.761685013771057 experiment 0.701496719137437 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423564 chr7:128423552 . . 0 9 hm5C_associated_SNPs_7516 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr7:128423540-128423560
64251 chr7 128423565 128423565 1 + C T rs148925636 128423574 + 128423554 128423594 41 GGTTCAAATCCCGGACGAGCCCTACTTTTTCTGTCCCTTCT GGTTCAAATCCTGGACGAGCCCTACTTTTTCTGTCCCTTCT < 41bp 1 0.0526993453940853 1 0.135612308979034 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control OPN1SW;CCDC136 ENSG00000128617;ENSG00000128596 intergenic Human other chr7:128423574 chr7:128423565 . . 0 12 hm5C_associated_SNPs_7517 0 0 18 SSB POSTAR2 GSE95683,GSM2521599 chr7:128423540-128423580
64251 chr7 128478820 128478820 1 + C T rs115140972 128478838 + 128478818 128478858 41 CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG CCTATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG < 41bp 1 0.0727797239685108 1 0.0361427962779999 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128478838 chr7:128478820 synonymous SNV . 0 3 hm5C_associated_SNPs_7518 1 0 1 METAP2 POSTAR2 ENCODE chr7:128478809-128478821
64251 chr7 128491324 128491324 1 + C T rs181067717 128491320 + 128491300 128491340 41 TTCTATGTGGATGCCATCAACAGCCGCCATGTCAGTGCCTA TTCTATGTGGATGCCATCAACAGCTGCCATGTCAGTGCCTA < 41bp 1 0.442936941614029 1 0.802037477493286 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128491320 chr7:128491324 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_7519 1 0 3 FXR1 POSTAR2 ENCODE chr7:128491303-128491347
64251 chr7 128491338 128491338 1 + C T rs117517372 128491320 + 128491300 128491340 41 TTCTATGTGGATGCCATCAACAGCCGCCATGTCAGTGCCTA TTCTATGTGGATGCCATCAACAGCCGCCATGTCAGTGCTTA < 41bp 1 0.322531969971233 1 0.755885899066925 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128491320 chr7:128491338 synonymous SNV . 0 39 hm5C_associated_SNPs_7520 1 0 5 DDX24 POSTAR2 ENCODE chr7:128491328-128491345
64251 chr7 128865063 128865063 1 + A C rs569350769 128865075 + 128865055 128865095 41 CGGTGGAGACCCTGAGGCTCCAGCTCCCGCCGCGGAGCGGC CGGTGGAGCCCCTGAGGCTCCAGCTCCCGCCGCGGAGCGGC < 41bp 1 0.758350448890732 1 0.456717431545258 experiment 0.483299102218537 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:128865075 chr7:128865063 nonsynonymous SNV 0.899 1 9 hm5C_associated_SNPs_7523 0 0 2 GRWD1 POSTAR2 ENCODE chr7:128864916-128865071
64251 chr7 129946635 129946635 1 + T A rs34549855 129946651 + 129946631 129946671 41 TATCTGATTACCAGAGGGATCCAGCTATCACCTCCATCTTG TATCAGATTACCAGAGGGATCCAGCTATCACCTCCATCTTG < 41bp 1 0.2322240620058 1 0.284936845302582 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CPA4 ENSG00000128510 CDS Human protein_coding chr7:129946651 chr7:129946635 synonymous SNV . 0 5 hm5C_associated_SNPs_7525 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:129946616-129946637
64251 chr7 131179555 131179555 1 + A T rs10260552 131179544 + 131179524 131179564 41 TTTGGATTTGTGTGAAATGTCTTTTGAAAAGAAAGTAGATA TTTGGATTTGTGTGAAATGTCTTTTGAAAAGTAAGTAGATA < 41bp 1 0.0643984889653291 1 0.0555345118045807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MKLN1 ENSG00000273489 ncRNA_exonic Human antisense chr7:131179544 chr7:131179555 . . 0 32 hm5C_associated_SNPs_7562 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:131179469-131179562
64251 chr7 133682273 133682273 1 + G A rs137961262 133682272 + 133682252 133682292 41 TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAG TCCTGCTCAAGACAGCCACACAAACACGGATCTCCCCCCAG < 41bp 1 0.18404573014046 1 0.138455659151077 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682272 chr7:133682273 synonymous SNV . 0 22 hm5C_associated_SNPs_7563 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682273 133682273 1 + G A rs137961262 133682278 + 133682258 133682298 41 TCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTCAG TCAAGACAGCCACACAAACACGGATCTCCCCCCAGTGTCAG < 41bp 1 0.40406512244378 1 0.177852243185043 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682278 chr7:133682273 synonymous SNV . 0 16 hm5C_associated_SNPs_7564 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682285 133682285 1 + C T rs34608222 133682272 + 133682252 133682292 41 TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAG TCCTGCTCAAGACAGCCACACGAACACGGATCTTCCCCCAG < 41bp 1 0.215345598512379 1 0.0693449378013611 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682272 chr7:133682285 synonymous SNV . 0 34 hm5C_associated_SNPs_7565 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682285 133682285 1 + C T rs34608222 133682276 + 133682256 133682296 41 GCTCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTC GCTCAAGACAGCCACACGAACACGGATCTTCCCCCAGTGTC < 41bp 1 0.732424590249185 1 0.541906833648682 experiment 0.535150819501629 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682276 chr7:133682285 synonymous SNV . 0 30 hm5C_associated_SNPs_7566 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682285 133682285 1 + C T rs34608222 133682278 + 133682258 133682298 41 TCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTCAG TCAAGACAGCCACACGAACACGGATCTTCCCCCAGTGTCAG < 41bp 1 0.400239100077229 1 0.228960067033768 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682278 chr7:133682285 synonymous SNV . 0 28 hm5C_associated_SNPs_7567 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 134215403 134215403 1 + T A rs1722883 134215396 + 134215376 134215416 41 CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTGAAAG CTTTTCTTTTGCCTTTCAGTCTCCTCTAGGCAAAGTGAAAG < 41bp 1 0.272114864771606 1 0.425022095441818 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134215396 chr7:134215403 synonymous SNV . 0 28 hm5C_associated_SNPs_7568 0 1 1 RPS3 POSTAR2 ENCODE chr7:134215403-134215440
64251 chr7 134552477 134552477 1 + A G rs78476965 134552471 + 134552451 134552491 41 CATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATG CATCATCTGGTCTCCCTGAACCTGAAGTCACACCATGGATG < 41bp 1 0.459156010538914 1 0.288136422634125 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CALD1 ENSG00000122786 UTR5 Human protein_coding chr7:134552471 chr7:134552477 . . 0 27 hm5C_associated_SNPs_7569 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:134552460-134552486
64251 chr7 139044963 139044963 1 + C A rs190082672 139044962 + 139044942 139044982 41 ATCCCCCAGCCCAAAAGGGCCCGGTCTGCGCCCCACCCCCG ATCCCCCAGCCCAAAAGGGCCAGGTCTGCGCCCCACCCCCG < 41bp 1 0.726537814949085 1 0.488850504159927 experiment 0.54692437010183 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LUC7L2 ENSG00000146963 UTR5 Human protein_coding chr7:139044962 chr7:139044963 . . 0 22 hm5C_associated_SNPs_7570 0 0 13 EIF3B POSTAR2 GSE65004,GSM1585667 chr7:139044908-139044982
64251 chr7 139107009 139107009 1 + A C rs202072515 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAAGATAAGCAGCGGTCCTATGAGAGTGCTAAT < 41bp 1 0.133578063699598 1 0.510713398456573 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107009 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_7571 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107009 139107009 1 + A C rs202072515 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGCAGCGGTCCTATGAGAGTGCTAATGGCA < 41bp 1 0.091446977144508 1 0.214930057525635 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107009 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_7572 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107009 139107009 1 + A C rs202072515 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGCAGCGGTCCTATGAGAGTGCTAATGGCAG < 41bp 1 0.192231213737406 1 0.0992810726165771 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107009 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_7573 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107009 139107009 1 + A C rs202072515 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GCAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA < 41bp 1 0.369440025528875 1 0.135240375995636 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107009 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_7574 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 140379042 140379042 1 + C T rs150090657 140379056 + 140379036 140379076 41 CCTCTGCGCCCCTTTGTCACCAGAGAAGTCTTGGTGGAAAC CCTCTGTGCCCCTTTGTCACCAGAGAAGTCTTGGTGGAAAC < 41bp 1 0.582029984660381 1 0.749381303787231 experiment 0.835940030679238 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140379056 chr7:140379042 nonsynonymous SNV 0.922 1 7 hm5C_associated_SNPs_7575 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140379026-140379051
64251 chr7 140397954 140397954 1 + G C rs112027407 140397974 + 140397954 140397994 41 GGGGTGGGCAGAAGGCAAAGCCCTGTGTGACTTGGGCAAAG CGGGTGGGCAGAAGGCAAAGCCCTGTGTGACTTGGGCAAAG < 41bp 1 0.262370002960325 1 0.200371265411377 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFB2 ENSG00000090266;ENSG00000090266 UTR5;UTR3 Human other chr7:140397974 chr7:140397954 . . 0 1 hm5C_associated_SNPs_7576 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:140397932-140397962
64251 chr7 140404746 140404746 1 + C T rs79658946 140404750 + 140404730 140404770 41 ACTGAAGGTGTAGACTCAGCCTCACTCTGTACAAGTGGGTG ACTGAAGGTGTAGACTTAGCCTCACTCTGTACAAGTGGGTG < 41bp 1 0.244801045967781 1 0.213245034217834 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB2 ENSG00000090266 UTR3 Human protein_coding chr7:140404750 chr7:140404746 . . 0 17 hm5C_associated_SNPs_7577 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr7:140404671-140404750
64251 chr7 140404760 140404760 1 + A G rs201056308 140404750 + 140404730 140404770 41 ACTGAAGGTGTAGACTCAGCCTCACTCTGTACAAGTGGGTG ACTGAAGGTGTAGACTCAGCCTCACTCTGTGCAAGTGGGTG < 41bp 1 0.179370460949523 1 0.135564684867859 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB2 ENSG00000090266 UTR3 Human protein_coding chr7:140404750 chr7:140404760 . . 0 31 hm5C_associated_SNPs_7578 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:140404702-140404764
64251 chr7 142991809 142991809 1 + C T rs186256855 142991795 + 142991775 142991815 41 GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTC GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTTACCCTC < 41bp 1 0.790597780077363 1 0.621505677700043 experiment 0.418804439845273 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991795 chr7:142991809 synonymous SNV . 0 35 hm5C_associated_SNPs_7665 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:142991792-142991821
64251 chr7 143080060 143080060 1 + A G rs11978404 143080053 + 143080033 143080073 41 CTCCGGCTCAGAGCCAGACACAGTTCCATGTTCAGCCCCAG CTCCGGCTCAGAGCCAGACACAGTTCCGTGTTCAGCCCCAG < 41bp 1 0.337101835813964 1 0.274206697940826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZYX ENSG00000159840 CDS Human protein_coding chr7:143080053 chr7:143080060 nonsynonymous SNV 0.129 0 28 hm5C_associated_SNPs_7666 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:143080040-143080060
64251 chr7 143080323 143080323 1 + C A rs142720695 143080316 + 143080296 143080336 41 CTTTCTGCTGGCACAGGCTCCCCTCAACCTCCCAGCTTCAC CTTTCTGCTGGCACAGGCTCCCCTCAAACTCCCAGCTTCAC < 41bp 1 0.0291689172535378 1 0.0357969999313354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZYX ENSG00000159840 CDS Human protein_coding chr7:143080316 chr7:143080323 nonsynonymous SNV 0.598 2 28 hm5C_associated_SNPs_7667 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:143080293-143080327
64251 chr7 148395986 148395986 1 + C G rs565460200 148396003 + 148395983 148396023 41 GCACGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAGGGAC GCAGGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAGGGAC < 41bp 1 0.525314717744779 1 0.271630078554153 experiment 0.949370564510441 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUL1 ENSG00000055130 intronic Human protein_coding chr7:148396003 chr7:148395986 . . 0 4 hm5C_associated_SNPs_7668 0 0 11 DDX3X POSTAR2 ENCODE chr7:148395972-148396009
64251 chr7 148844735 148844735 1 + G T rs139320278 148844745 + 148844725 148844765 41 GGCGCCGCCTGTGGAGAGGACCCGGCGGCCGGGCCTGCTTG GGCGCCGCCTTTGGAGAGGACCCGGCGGCCGGGCCTGCTTG < 41bp 1 0.693705428372499 1 0.703346014022827 experiment 0.612589143255002 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF398 ENSG00000197024 UTR5 Human protein_coding chr7:148844745 chr7:148844735 . . 0 11 hm5C_associated_SNPs_7669 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:148844734-148844735
64251 chr7 148844753 148844753 1 + C A rs570802802 148844745 + 148844725 148844765 41 GGCGCCGCCTGTGGAGAGGACCCGGCGGCCGGGCCTGCTTG GGCGCCGCCTGTGGAGAGGACCCGGCGGACGGGCCTGCTTG < 41bp 1 0.725858985261663 1 0.72019100189209 experiment 0.548282029476673 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF398 ENSG00000197024 UTR5 Human protein_coding chr7:148844745 chr7:148844753 . . 0 29 hm5C_associated_SNPs_7670 0 0 1 DDX3X POSTAR2 ENCODE chr7:148844747-148844814
64251 chr7 148979360 148979360 1 + C T rs573328772 148979350 + 148979330 148979370 41 ATGCAGACCCACGCCCGAGGCCAGGTGGGCCCACACTTCCC ATGCAGACCCACGCCCGAGGCCAGGTGGGCTCACACTTCCC < 41bp 1 0.428372010729736 1 0.30122572183609 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148979350 chr7:148979360 nonsynonymous SNV 0.005 1 31 hm5C_associated_SNPs_7672 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148979346-148979372
64251 chr7 148979360 148979360 1 + C T rs573328772 148979351 + 148979331 148979371 41 TGCAGACCCACGCCCGAGGCCAGGTGGGCCCACACTTCCCT TGCAGACCCACGCCCGAGGCCAGGTGGGCTCACACTTCCCT < 41bp 1 0.500039620943302 1 0.464245468378067 experiment 0.999920758113396 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148979351 chr7:148979360 nonsynonymous SNV 0.005 1 30 hm5C_associated_SNPs_7673 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148979346-148979372
64251 chr7 148990909 148990909 1 + A G rs541975721 148990895 + 148990875 148990915 41 AATGCATGAGACACAGATTCCACTCAGGAGAGAGAAGACGA AATGCATGAGACACAGATTCCACTCAGGAGAGAGGAGACGA < 41bp 1 0.154347954822507 1 0.0535017549991608 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC155060 ENSG00000204946 CDS Human protein_coding chr7:148990895 chr7:148990909 nonsynonymous SNV . 0 35 hm5C_associated_SNPs_7678 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148990887-148990930
64251 chr7 149007286 149007286 1 + C A rs112067002 149007291 + 149007271 149007311 41 AATGGCAGCAGGGGGCATAGCTCAGTGGTAGAGCATTTGAC AATGGCAGCAGGGGGAATAGCTCAGTGGTAGAGCATTTGAC < 41bp 1 0.565757536382171 1 0.822897732257843 experiment 0.868484927235659 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC155060;ZNF777 ENSG00000244560;ENSG00000231397 intergenic Human other chr7:149007291 chr7:149007286 . . 0 16 hm5C_associated_SNPs_7679 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:149007280-149007300
64251 chr7 149007286 149007286 1 + C A rs112067002 149007293 + 149007273 149007313 41 TGGCAGCAGGGGGCATAGCTCAGTGGTAGAGCATTTGACTG TGGCAGCAGGGGGAATAGCTCAGTGGTAGAGCATTTGACTG < 41bp 1 0.668773295043673 1 0.495133459568024 experiment 0.662453409912653 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC155060;ZNF777 ENSG00000244560;ENSG00000231397 intergenic Human other chr7:149007293 chr7:149007286 . . 0 14 hm5C_associated_SNPs_7680 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:149007280-149007300
64251 chr7 149007286 149007286 1 + C A rs112067002 149007304 + 149007284 149007324 41 GGCATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAG GGAATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAG < 41bp 1 0.0879684710821995 1 0.0696504712104797 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC155060;ZNF777 ENSG00000244560;ENSG00000231397 intergenic Human other chr7:149007304 chr7:149007286 . . 0 3 hm5C_associated_SNPs_7681 0 0 84 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:149007280-149007300
64251 chr7 149007344 149007344 1 + G C rs886713 149007328 + 149007308 149007348 41 TGACTGCAGATCAAGAGGTCCCTGGTTCAAATCCAGGTGCC TGACTGCAGATCAAGAGGTCCCTGGTTCAAATCCAGCTGCC < 41bp 1 0.174521173484198 1 0.100360721349716 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC155060;ZNF777 ENSG00000244560;ENSG00000231397 intergenic Human other chr7:149007328 chr7:149007344 . . 0 37 hm5C_associated_SNPs_7682 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:149007280-149007357
64251 chr7 149305484 149305484 1 + G A rs528934771 149305479 + 149305459 149305499 41 CTATGACTGGGTGTATGGCTCAGGGGTAGAGAATTTGACTA CTATGACTGGGTGTATGGCTCAGGGATAGAGAATTTGACTA < 41bp 1 0.799853977675461 1 0.8340123295784 experiment 0.400292044649079 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF767P ENSG00000133624 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr7:149305479 chr7:149305484 . . 0 26 hm5C_associated_SNPs_7683 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr7:149305476-149305508
64251 chr7 149419635 149419635 1 + T G rs75701347 149419643 + 149419623 149419663 41 GAGAGAGGGACCTCAGAGGCCGGTGAGAGGCGGGCTTTCCT GAGAGAGGGACCGCAGAGGCCGGTGAGAGGCGGGCTTTCCT < 41bp 1 0.412549931293135 1 0.462305575609207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KRBA1 ENSG00000133619 CDS Human protein_coding chr7:149419643 chr7:149419635 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_7686 0 0 1 PPIG POSTAR2 ENCODE chr7:149419608-149419646
64251 chr7 150034703 150034703 1 + G A rs149223172 150034708 + 150034688 150034728 41 GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT GGTACTCAGCTCTGCAGGCCCCACCTCTTCCTTCGTCTTCT < 41bp 1 0.213885037449964 1 0.0291200578212738 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034708 chr7:150034703 synonymous SNV . 0 16 hm5C_associated_SNPs_7687 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150034689-150034721
64251 chr7 150034722 150034722 1 + G A rs75914222 150034708 + 150034688 150034728 41 GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCATCTTCT < 41bp 1 0.21539591663362 1 0.0460728406906128 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034708 chr7:150034722 nonsynonymous SNV 0.145 1 35 hm5C_associated_SNPs_7688 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150034689-150034722
64251 chr7 150068620 150068620 1 + C A rs17173703 150068639 + 150068619 150068659 41 GCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGC GACCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGC < 41bp 1 0.227600281525454 1 0.0357639491558075 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068639 chr7:150068620 nonsynonymous SNV 0.349 0 2 hm5C_associated_SNPs_7689 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150068580-150068740
64251 chr7 150068981 150068981 1 + G A rs149624173 150068970 + 150068950 150068990 41 CCGCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCC CCGCAGCCAAGGCTCTGGGGCCCCGGCCCAGAGGCCGCCCC < 41bp 1 0.540990463571641 1 0.0762514472007751 experiment 0.918019072856717 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068970 chr7:150068981 synonymous SNV . 0 32 hm5C_associated_SNPs_7690 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068981 150068981 1 + G A rs149624173 150068971 + 150068951 150068991 41 CGCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCG CGCAGCCAAGGCTCTGGGGCCCCGGCCCAGAGGCCGCCCCG < 41bp 1 0.716471606364469 1 0.483310163021088 experiment 0.567056787271062 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068971 chr7:150068981 synonymous SNV . 0 31 hm5C_associated_SNPs_7691 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068981 150068981 1 + G A rs149624173 150068972 + 150068952 150068992 41 GCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGC GCAGCCAAGGCTCTGGGGCCCCGGCCCAGAGGCCGCCCCGC < 41bp 1 0.689385465747804 1 0.529146552085876 experiment 0.621229068504393 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068972 chr7:150068981 synonymous SNV . 0 30 hm5C_associated_SNPs_7692 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068981 150068981 1 + G A rs149624173 150068973 + 150068953 150068993 41 CAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGCG CAGCCAAGGCTCTGGGGCCCCGGCCCAGAGGCCGCCCCGCG < 41bp 1 0.771724524001131 1 0.686452567577362 experiment 0.456550951997737 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068973 chr7:150068981 synonymous SNV . 0 29 hm5C_associated_SNPs_7693 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068981 150068981 1 + G A rs149624173 150068984 + 150068964 150069004 41 CTGGGGCCCCGGCCCAGGGGCCGCCCCGCGGTGACCGCCCC CTGGGGCCCCGGCCCAGAGGCCGCCCCGCGGTGACCGCCCC < 41bp 1 0.40910881529266 1 0.377656877040863 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068984 chr7:150068981 synonymous SNV . 0 18 hm5C_associated_SNPs_7694 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150812565 150812565 1 + C T rs183535982 150812557 + 150812537 150812577 41 CCTTCCCCAGCCGCCGCGACCTGCTGGGCTCCGACGCCCCG CCTTCCCCAGCCGCCGCGACCTGCTGGGTTCCGACGCCCCG < 41bp 1 0.58510771498666 1 0.131549000740051 experiment 0.829784570026681 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150812557 chr7:150812565 synonymous SNV . 0 29 hm5C_associated_SNPs_7701 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:150812546-150812577
64251 chr7 150931154 150931154 1 + G A rs3748101 150931172 + 150931152 150931192 41 GGGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTC GGACTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTC < 41bp 1 0.413640374203787 1 0.175524324178696 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150931172 chr7:150931154 synonymous SNV . 0 3 hm5C_associated_SNPs_7705 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:150931127-150931169
64251 chr7 150931154 150931154 1 + G A rs3748101 150931173 + 150931153 150931193 41 GGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTCC GACTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTCC < 41bp 1 0.549683899994175 1 0.0936368703842163 experiment 0.90063220001165 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150931173 chr7:150931154 synonymous SNV . 0 2 hm5C_associated_SNPs_7706 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:150931127-150931169
64251 chr7 150933623 150933623 1 + C T rs376421293 150933611 + 150933591 150933631 41 CCGAAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGC CCGAAGGTACCCTCATGTACCGGCTCCACAAATGCTTCAGC < 41bp 1 0.367919829459576 1 0.275407493114471 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933611 chr7:150933623 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_7707 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150933619-150933657
64251 chr7 150933623 150933623 1 + C T rs376421293 150933614 + 150933594 150933634 41 AAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCT AAGGTACCCTCATGTACCGGCTCCACAAATGCTTCAGCGCT < 41bp 1 0.333686025956213 1 0.88405168056488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933614 chr7:150933623 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_7708 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150933619-150933657
64251 chr7 150933623 150933623 1 + C T rs376421293 150933616 + 150933596 150933636 41 GGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCTCT GGTACCCTCATGTACCGGCTCCACAAATGCTTCAGCGCTCT < 41bp 1 0.246345177231941 1 0.063422828912735 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933616 chr7:150933623 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_7709 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150933619-150933657
64251 chr7 150934975 150934975 1 + C A rs2487154 150934974 + 150934954 150934994 41 AGCCCCGGCTTTCCTCGAGGCCTTTGCAGCCAATGTCCTGG AGCCCCGGCTTTCCTCGAGGCATTTGCAGCCAATGTCCTGG < 41bp 1 0.0499896873680249 1 0.0296366214752197 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150934974 chr7:150934975 synonymous SNV . 0 22 hm5C_associated_SNPs_7710 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:150934960-150934980
64251 chr7 151722908 151722908 1 + G A rs546454494 151722901 + 151722881 151722921 41 TCCTGCGGGTCGGACTGGGGCTGTGGCGGGAGAGAAGATGC TCCTGCGGGTCGGACTGGGGCTGTGGCAGGAGAGAAGATGC < 41bp 1 0.676258088858413 1 0.341240763664246 experiment 0.647483822283173 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT11 ENSG00000178234 UTR5 Human protein_coding chr7:151722901 chr7:151722908 . . 0 28 hm5C_associated_SNPs_7711 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:151722879-151722908
64251 chr7 151722908 151722908 1 + G A rs546454494 151722924 + 151722904 151722944 41 TGGCGGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCG TGGCAGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCG < 41bp 1 0.344238749111816 1 0.268348902463913 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT11 ENSG00000178234 UTR5 Human protein_coding chr7:151722924 chr7:151722908 . . 0 5 hm5C_associated_SNPs_7712 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:151722879-151722908
64251 chr7 151722908 151722908 1 + G A rs546454494 151722927 + 151722907 151722947 41 CGGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCGGCG CAGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCGGCG < 41bp 1 0.788176872232733 1 0.377719342708588 experiment 0.423646255534534 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT11 ENSG00000178234 UTR5 Human protein_coding chr7:151722927 chr7:151722908 . . 0 2 hm5C_associated_SNPs_7713 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:151722879-151722908
64251 chr7 151722908 151722908 1 + G A rs546454494 151722928 + 151722908 151722948 41 GGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCGGCGA AGGAGAGAAGATGCCGCAGCCCGAGTCCCAGAAGGCGGCGA < 41bp 1 0.591188193363307 1 0.765236377716064 experiment 0.817623613273387 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT11 ENSG00000178234 UTR5 Human protein_coding chr7:151722928 chr7:151722908 . . 0 1 hm5C_associated_SNPs_7714 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:151722879-151722908
64251 chr7 151817987 151817987 1 + C A rs143156028 151818003 + 151817983 151818023 41 CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG CTCGATCATCAGACCCGCCACGGCTCATGAAATGCCACGGG < 41bp 1 0.462303372154523 1 0.25760406255722 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151818003 chr7:151817987 synonymous SNV . 0 5 hm5C_associated_SNPs_7715 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:151817952-151817990
64251 chr7 155437496 155437496 1 + C A rs76847091 155437502 + 155437482 155437522 41 TCCGTCACCCGTACCCGGGCCCGGACCAGGCACGTCGGCCC TCCGTCACCCGTACACGGGCCCGGACCAGGCACGTCGGCCC < 41bp 1 0.613870409772384 1 0.302464842796326 experiment 0.772259180455232 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBM33 ENSG00000184863 UTR5 Human protein_coding chr7:155437502 chr7:155437496 . . 0 15 hm5C_associated_SNPs_7716 0 0 15 EIF3B POSTAR2 GSE65004,GSM1585667 chr7:155437462-155437510
64251 chr7 155534630 155534630 1 + A G rs559007917 155534638 + 155534618 155534658 41 ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGC ATAGAAATGAGCGGCAGCCGCTGCTCTGCCACGCCCTCAGC < 41bp 1 0.521540503304748 1 0.197132885456085 experiment 0.956918993390503 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534638 chr7:155534630 nonsynonymous SNV 0.022 0 13 hm5C_associated_SNPs_7717 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:155534595-155534630
64251 chr7 155534653 155534653 1 + C A rs73167165 155534638 + 155534618 155534658 41 ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGC ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCATCAGC < 41bp 1 0.387186229472932 1 0.132803171873093 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534638 chr7:155534653 synonymous SNV . 0 36 hm5C_associated_SNPs_7718 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:155534652-155534653
64251 chr7 155534738 155534738 1 + G A rs75145238 155534723 + 155534703 155534743 41 TGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAA TGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAATGAAA < 41bp 1 0.693735957050916 1 0.36903578042984 experiment 0.612528085898167 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534723 chr7:155534738 nonsynonymous SNV 0.671 0 36 hm5C_associated_SNPs_7719 0 0 2 UCHL5 POSTAR2 ENCODE chr7:155534697-155534783
64251 chr7 155568550 155568550 1 + A T rs10269841 155568552 + 155568532 155568572 41 GGCCTGAAGGTGGAACAGACCTGTTTTTTTCCTTTTTAAAT GGCCTGAAGGTGGAACAGTCCTGTTTTTTTCCTTTTTAAAT < 41bp 1 0.12337394219062 1 0.0801658928394318 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 UTR3 Human protein_coding chr7:155568552 chr7:155568550 . . 0 19 hm5C_associated_SNPs_7720 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:155568519-155568556
64251 chr7 156931872 156931872 1 + C A rs551763590 156931867 + 156931847 156931887 41 CGCGTCCTCGCTGCCCCGGGCCGGGCGGGCGGGCGCCGAGA CGCGTCCTCGCTGCCCCGGGCCGGGAGGGCGGGCGCCGAGA < 41bp 1 0.788866367279897 1 0.566143214702606 experiment 0.422267265440206 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931867 chr7:156931872 . . 0 26 hm5C_associated_SNPs_7734 0 0 7 DDX3X POSTAR2 ENCODE chr7:156931768-156931894
64251 chr7 156931907 156931907 1 + G T rs182166882 156931910 + 156931890 156931930 41 CTCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCG CTCCCAGCCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCG < 41bp 1 0.510199980789598 1 0.309484899044037 experiment 0.979600038420805 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931910 chr7:156931907 . . 0 18 hm5C_associated_SNPs_7735 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931911 + 156931891 156931931 41 TCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGC TCCCAGCCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGC < 41bp 1 0.692052417320697 1 0.222970277070999 experiment 0.615895165358606 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931911 chr7:156931907 . . 0 17 hm5C_associated_SNPs_7736 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931913 + 156931893 156931933 41 CCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGG CCAGCCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGCGG < 41bp 1 0.429317367027624 1 0.301189363002777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931913 chr7:156931907 . . 0 15 hm5C_associated_SNPs_7737 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931914 + 156931894 156931934 41 CAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGC CAGCCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGCGGC < 41bp 1 0.209670455237161 1 0.062591940164566 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931914 chr7:156931907 . . 0 14 hm5C_associated_SNPs_7738 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931915 + 156931895 156931935 41 AGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCG AGCCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGCGGCG < 41bp 1 0.619138943814185 1 0.271847188472748 experiment 0.76172211237163 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931915 chr7:156931907 . . 0 13 hm5C_associated_SNPs_7739 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931917 + 156931897 156931937 41 CCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCGGC CCCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGCGGCGGC < 41bp 1 0.649257362748205 1 0.342094331979752 experiment 0.70148527450359 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931917 chr7:156931907 . . 0 11 hm5C_associated_SNPs_7740 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931907 156931907 1 + G T rs182166882 156931918 + 156931898 156931938 41 CCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCGGCG CCGCCCCGTTCCCCGCCCGCCCGGCTGCTTCCGCGGCGGCG < 41bp 1 0.448494033642184 1 0.430305987596512 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931918 chr7:156931907 . . 0 10 hm5C_associated_SNPs_7741 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:156931906-156931907
64251 chr7 156931928 156931928 1 + C T rs187960014 156931910 + 156931890 156931930 41 CTCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCG CTCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCG < 41bp 1 0.419582738165064 1 0.219732016324997 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931910 chr7:156931928 . . 0 39 hm5C_associated_SNPs_7742 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931911 + 156931891 156931931 41 TCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGC TCCCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGC < 41bp 1 0.600980181784304 1 0.217382371425629 experiment 0.798039636431392 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931911 chr7:156931928 . . 0 38 hm5C_associated_SNPs_7743 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931913 + 156931893 156931933 41 CCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGG CCAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGCGG < 41bp 1 0.386834740193888 1 0.122537225484848 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931913 chr7:156931928 . . 0 36 hm5C_associated_SNPs_7744 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931914 + 156931894 156931934 41 CAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGC CAGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGCGGC < 41bp 1 0.255666687127831 1 0.0757082998752594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931914 chr7:156931928 . . 0 35 hm5C_associated_SNPs_7745 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931915 + 156931895 156931935 41 AGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCG AGCCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGCGGCG < 41bp 1 0.650138560492084 1 0.422056674957275 experiment 0.699722879015833 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931915 chr7:156931928 . . 0 34 hm5C_associated_SNPs_7746 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931917 + 156931897 156931937 41 CCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCGGC CCCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGCGGCGGC < 41bp 1 0.714375230612823 1 0.683427691459656 experiment 0.571249538774353 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931917 chr7:156931928 . . 0 32 hm5C_associated_SNPs_7747 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 156931928 156931928 1 + C T rs187960014 156931918 + 156931898 156931938 41 CCGCCCCGTGCCCCGCCCGCCCGGCTGCTTCCGCGGCGGCG CCGCCCCGTGCCCCGCCCGCCCGGCTGCTTTCGCGGCGGCG < 41bp 1 0.409898677645749 1 0.532204210758209 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3C ENSG00000009335 UTR5 Human protein_coding chr7:156931918 chr7:156931928 . . 0 31 hm5C_associated_SNPs_7748 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:156931920-156931940
64251 chr7 157000224 157000224 1 + C T rs17837726 157000240 + 157000220 157000260 41 ATAACGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT ATAATGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT < 41bp 1 0.0414717183892202 1 0.129860371351242 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157000240 chr7:157000224 synonymous SNV . 0 5 hm5C_associated_SNPs_7749 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr7:157000154-157000246
64251 chr7 157000243 157000243 1 + A G rs62001023 157000240 + 157000220 157000260 41 ATAACGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT ATAACGAATTCTTCGGTGATCCCGTAGAAGGTAAGGATTTT < 41bp 1 0.10828026070355 1 0.160988360643387 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157000240 chr7:157000243 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_7750 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr7:157000154-157000246
64251 chr7 158734630 158734630 1 + C T rs199624775 158734618 + 158734598 158734638 41 CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGACGGAAGCAT CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGATGGAAGCAT < 41bp 1 0.489808148014589 1 0.413379192352295 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158734618 chr7:158734630 synonymous SNV . 0 33 hm5C_associated_SNPs_7760 0 0 2 DDX24 POSTAR2 ENCODE chr7:158734617-158734637
64251 chr8 1733369 1733369 1 + C T rs56270086 1733379 + 1733359 1733399 41 GGCTCGGCCGCGAAGTGTGTCAGGTGTGCATCCTGGGTGCT GGCTCGGCCGTGAAGTGTGTCAGGTGTGCATCCTGGGTGCT < 41bp 1 0.746122929356262 1 0.619084417819977 experiment 0.507754141287477 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CLN8 ENSG00000182372 UTR3 Human protein_coding chr8:1733379 chr8:1733369 . . 0 11 hm5C_associated_SNPs_7761 0 0 1 NONO POSTAR2 ENCODE chr8:1733284-1733378
64251 chr8 1791537 1791537 1 + G A rs186575667 1791535 + 1791515 1791555 41 GCAGGAGCTCCTTCCCTTAACAGAGCTGAGAGAGGCATCTG GCAGGAGCTCCTTCCCTTAACAAAGCTGAGAGAGGCATCTG < 41bp 1 0.579121123140775 1 0.465227484703064 experiment 0.84175775371845 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1791535 chr8:1791537 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_7762 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:1791537-1791538
64251 chr8 1791537 1791537 1 + G A rs186575667 1791550 + 1791530 1791570 41 CTTAACAGAGCTGAGAGAGGCATCTGGAGCTGCAGCATGGA CTTAACAAAGCTGAGAGAGGCATCTGGAGCTGCAGCATGGA < 41bp 1 0.27846354322407 1 0.165222257375717 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1791550 chr8:1791537 nonsynonymous SNV 0.002 0 8 hm5C_associated_SNPs_7763 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:1791537-1791538
64251 chr8 1806229 1806229 1 + A C rs4875950 1806226 + 1806206 1806246 41 CCAGAAGCGGACAGACAGGCCCCATCCGCCCCTGAGACAGG CCAGAAGCGGACAGACAGGCCCCCTCCGCCCCTGAGACAGG < 41bp 1 0.133837078090123 1 0.11646831035614 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1806226 chr8:1806229 synonymous SNV . 0 24 hm5C_associated_SNPs_7764 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:1806210-1806231
64251 chr8 1851447 1851447 1 + G A rs201067899 1851453 + 1851433 1851473 41 CCTGTTGCTTGTAGGACATGCTGAAGAACACCTCCAAAGGC CCTGTTGCTTGTAGAACATGCTGAAGAACACCTCCAAAGGC < 41bp 1 0.680608649385523 1 0.449548363685608 experiment 0.638782701228954 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1851453 chr8:1851447 nonsynonymous SNV 0.964 4 15 hm5C_associated_SNPs_7765 0 0 1 ZNF622 POSTAR2 ENCODE chr8:1851445-1851489
64251 chr8 6302738 6302738 1 + G A rs146586991 6302737 + 6302717 6302757 41 GGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGA GGCCGTGCAACTTCGAGTTGCATGACTTCTGCCCCTGAAGA < 41bp 1 0.540838409847748 1 0.0531031787395477 experiment 0.918323180304505 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302737 chr8:6302738 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_7766 3 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr8:6302727-6302748
64251 chr8 6566360 6566360 1 + C A rs138274785 6566346 + 6566326 6566366 41 TCTACCAAGCGCTGGACGACCGGCTCTACTGCGTCTACCAG TCTACCAAGCGCTGGACGACCGGCTCTACTGCGTATACCAG < 41bp 1 0.736909731440916 1 0.432391375303268 experiment 0.526180537118168 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6566346 chr8:6566360 synonymous SNV . 0 35 hm5C_associated_SNPs_7767 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:6566352-6566393
64251 chr8 6582437 6582437 1 + A G rs116874845 6582451 + 6582431 6582471 41 TAATATATTTAGCAAATCATCAAAGCACAGGTTTGTATTTC TAATATGTTTAGCAAATCATCAAAGCACAGGTTTGTATTTC < 41bp 1 0.255958553030206 1 0.246810048818588 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6582451 chr8:6582437 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_7768 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:6582424-6582455
64251 chr8 8890468 8890468 1 + C G rs145487375 8890481 + 8890461 8890501 41 CTCGAGACCAGAGACTGTGACTTCTGCATCTTTGATTCCAG CTCGAGAGCAGAGACTGTGACTTCTGCATCTTTGATTCCAG < 41bp 1 0.475179384070997 1 0.232608288526535 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERI1 ENSG00000104626 UTR3 Human protein_coding chr8:8890481 chr8:8890468 . . 0 8 hm5C_associated_SNPs_7770 0 0 9 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:8890452-8890486
64251 chr8 9564419 9564419 1 + C T rs34433162 9564436 + 9564416 9564456 41 TAGCCATGGCGCTGATCCTACATTAGTCAACTGCCATGGCA TAGTCATGGCGCTGATCCTACATTAGTCAACTGCCATGGCA < 41bp 1 0.31627637414493 1 0.0302234292030334 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9564436 chr8:9564419 synonymous SNV . 0 4 hm5C_associated_SNPs_7771 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:9564415-9564429
64251 chr8 9564437 9564437 1 + A G rs7006985 9564436 + 9564416 9564456 41 TAGCCATGGCGCTGATCCTACATTAGTCAACTGCCATGGCA TAGCCATGGCGCTGATCCTACGTTAGTCAACTGCCATGGCA < 41bp 1 0.37735786596181 1 0.0560300946235657 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9564436 chr8:9564437 synonymous SNV . 0 22 hm5C_associated_SNPs_7772 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr8:9564418-9564441
64251 chr8 9635060 9635060 1 + C T rs530512767 9635050 + 9635030 9635070 41 TTTCCAACACAAGCCTGCCACAGAGGTCTTCGGGACAGTAC TTTCCAACACAAGCCTGCCACAGAGGTCTTTGGGACAGTAC < 41bp 1 0.551892338045656 1 0.784770369529724 experiment 0.896215323908687 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNKS ENSG00000173273 UTR3 Human protein_coding chr8:9635050 chr8:9635060 . . 0 31 hm5C_associated_SNPs_7773 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:9635050-9635100
64251 chr8 11644012 11644012 1 + C T rs181242603 11643995 + 11643975 11644015 41 TCTAGTTCAGTTAATTCATCCTGTTGAATTGCACCATCGTG TCTAGTTCAGTTAATTCATCCTGTTGAATTGCACCATTGTG < 41bp 1 0.0899632739659353 1 0.0689049959182739 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NEIL2 ENSG00000154328 UTR3 Human protein_coding chr8:11643995 chr8:11644012 . . 0 38 hm5C_associated_SNPs_7786 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr8:11644005-11644026
64251 chr8 11695970 11695970 1 + A G rs189378553 11695990 + 11695970 11696010 41 AGAATCTTCCCAACTGTCAGCTGATTTCCCGAAGCCACTAC GGAATCTTCCCAACTGTCAGCTGATTTCCCGAAGCCACTAC < 41bp 1 0.473260097632326 1 0.186774253845215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11695990 chr8:11695970 nonsynonymous SNV 0.934 1 1 hm5C_associated_SNPs_7787 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:11695938-11695971
64251 chr8 17423569 17423569 1 + T A rs6980566 17423573 + 17423553 17423593 41 TTGAAGATCAAAGAGTTAGACCAATGCTTGAATAAGTAGAC TTGAAGATCAAAGAGTAAGACCAATGCTTGAATAAGTAGAC < 41bp 1 0.117898530689927 1 0.323683321475983 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17423573 chr8:17423569 . . 0 17 hm5C_associated_SNPs_7788 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr8:17423523-17423578
64251 chr8 17424344 17424344 1 + A G rs58218284 17424352 + 17424332 17424372 41 TCCCAGGACAGCATGGTGAACATTACCAGGCATGCTAGCTG TCCCAGGACAGCGTGGTGAACATTACCAGGCATGCTAGCTG < 41bp 1 0.444122363873795 1 0.0453577637672424 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17424352 chr8:17424344 . . 0 13 hm5C_associated_SNPs_7789 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr8:17424326-17424352
64251 chr8 17426274 17426274 1 + A G rs14108 17426288 + 17426268 17426308 41 TTTAAGACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTA TTTAAGGCCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTA < 41bp 1 0.462460800154023 1 0.158439844846725 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17426288 chr8:17426274 . . 0 7 hm5C_associated_SNPs_7790 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:17426260-17426280
64251 chr8 17426277 17426277 1 + G A rs143922403 17426288 + 17426268 17426308 41 TTTAAGACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTA TTTAAGACCAGCCTGAGTAGCATAGCAAGACCCTGTCTCTA < 41bp 1 0.465747793150607 1 0.0970278084278107 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17426288 chr8:17426277 . . 0 10 hm5C_associated_SNPs_7791 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:17426260-17426280
64251 chr8 17426282 17426282 1 + G A rs147397454 17426288 + 17426268 17426308 41 TTTAAGACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTA TTTAAGACCGGCCTAAGTAGCATAGCAAGACCCTGTCTCTA < 41bp 1 0.483824635573624 1 0.192369192838669 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17426288 chr8:17426282 . . 0 15 hm5C_associated_SNPs_7792 0 0 1 FAM120A POSTAR2 ENCODE chr8:17426256-17426309
64251 chr8 17426285 17426285 1 + T C rs138094091 17426288 + 17426268 17426308 41 TTTAAGACCGGCCTGAGTAGCATAGCAAGACCCTGTCTCTA TTTAAGACCGGCCTGAGCAGCATAGCAAGACCCTGTCTCTA < 41bp 1 0.400542388184931 1 0.245436877012253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 UTR3 Human protein_coding chr8:17426288 chr8:17426285 . . 0 18 hm5C_associated_SNPs_7793 0 0 1 FAM120A POSTAR2 ENCODE chr8:17426256-17426309
64251 chr8 17780385 17780385 1 + G C rs17467420 17780401 + 17780381 17780421 41 CATTGCGGCTCCCGCCCGGGCGAGTTCTCGCCCCCGCGCGG CATTCCGGCTCCCGCCCGGGCGAGTTCTCGCCCCCGCGCGG < 41bp 1 0.740079467921441 1 0.474933296442032 experiment 0.519841064157119 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PCM1 ENSG00000078674 UTR5 Human protein_coding chr8:17780401 chr8:17780385 . . 0 5 hm5C_associated_SNPs_7795 0 0 4 DDX3X POSTAR2 ENCODE chr8:17780374-17780659
64251 chr8 17780391 17780391 1 + C G rs539844523 17780401 + 17780381 17780421 41 CATTGCGGCTCCCGCCCGGGCGAGTTCTCGCCCCCGCGCGG CATTGCGGCTGCCGCCCGGGCGAGTTCTCGCCCCCGCGCGG < 41bp 1 0.780419877420503 1 0.478570282459259 experiment 0.439160245158994 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PCM1 ENSG00000078674 UTR5 Human protein_coding chr8:17780401 chr8:17780391 . . 0 11 hm5C_associated_SNPs_7796 0 0 4 DDX3X POSTAR2 ENCODE chr8:17780374-17780659
64251 chr8 17780521 17780521 1 + G A rs557554985 17780517 + 17780497 17780537 41 ACAATGAGATCCTAAGATGGCGGTGGCTGCGGCGGTTGGCG ACAATGAGATCCTAAGATGGCGGTAGCTGCGGCGGTTGGCG < 41bp 1 0.779117531380001 1 0.730863451957703 experiment 0.441764937239998 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCM1 ENSG00000078674 UTR5 Human protein_coding chr8:17780517 chr8:17780521 . . 0 25 hm5C_associated_SNPs_7797 0 0 6 DDX3X POSTAR2 ENCODE chr8:17780374-17780659
64251 chr8 17780521 17780521 1 + G A rs557554985 17780523 + 17780503 17780543 41 AGATCCTAAGATGGCGGTGGCTGCGGCGGTTGGCGCTGCGT AGATCCTAAGATGGCGGTAGCTGCGGCGGTTGGCGCTGCGT < 41bp 1 0.794540674141503 1 0.408920228481293 experiment 0.410918651716993 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCM1 ENSG00000078674 UTR5 Human protein_coding chr8:17780523 chr8:17780521 . . 0 19 hm5C_associated_SNPs_7798 0 0 6 DDX3X POSTAR2 ENCODE chr8:17780374-17780659
64251 chr8 17794733 17794733 1 + G A rs34804690 17794729 + 17794709 17794749 41 GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC GAAAGTGATAAAAGAGTAACCAATAATATTTCTCCGGAGTC < 41bp 1 0.437673408523432 1 0.361956834793091 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17794729 chr8:17794733 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_7799 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr8:17794720-17794740
64251 chr8 17817571 17817571 1 + G A rs558115555 17817579 + 17817559 17817599 41 GCATCAAATTTGGATGATTTCTACCCAGCAGAAGAAGACAC GCATCAAATTTGAATGATTTCTACCCAGCAGAAGAAGACAC < 41bp 1 0.313662393644742 1 0.0492197275161743 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17817579 chr8:17817571 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_7800 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17817547-17817572
64251 chr8 17819572 17819572 1 + C T rs3780103 17819570 + 17819550 17819590 41 CTGCTAGTGTGGGTAACTGTCCCACCAAAAAATATATGCCA CTGCTAGTGTGGGTAACTGTCCTACCAAAAAATATATGCCA < 41bp 1 0.0593087544194543 1 0.303266763687134 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PCM1 ENSG00000078674 CDS Human protein_coding chr8:17819570 chr8:17819572 synonymous SNV . 0 23 hm5C_associated_SNPs_7801 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:17819569-17819587
64251 chr8 17819572 17819572 1 + C T rs3780103 17819571 + 17819551 17819591 41 TGCTAGTGTGGGTAACTGTCCCACCAAAAAATATATGCCAG TGCTAGTGTGGGTAACTGTCCTACCAAAAAATATATGCCAG < 41bp 1 0.308903141819187 1 0.453431934118271 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17819571 chr8:17819572 synonymous SNV . 0 22 hm5C_associated_SNPs_7802 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:17819569-17819587
64251 chr8 19253041 19253041 1 + T C rs144784881 19253056 + 19253036 19253076 41 TCACATTGGATTAGGGTGGGCCCCAAATCCAATGACTGGCA TCACACTGGATTAGGGTGGGCCCCAAATCCAATGACTGGCA < 41bp 1 0.629946432862664 1 0.076513946056366 experiment 0.740107134274672 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SH2D4A ENSG00000104611 UTR3 Human protein_coding chr8:19253056 chr8:19253041 . . 0 6 hm5C_associated_SNPs_7804 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr8:19253018-19253049
64251 chr8 19824342 19824342 1 + T C rs191751442 19824339 + 19824319 19824359 41 TCAGGCTTGGAATGAATTCTCTCTAAAAATAAAATGATGTA TCAGGCTTGGAATGAATTCTCTCCAAAAATAAAATGATGTA < 41bp 1 0.785970050825794 1 0.889413714408875 experiment 0.428059898348411 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LPL ENSG00000175445 UTR3 Human protein_coding chr8:19824339 chr8:19824342 . . 0 24 hm5C_associated_SNPs_7805 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:19824304-19824344
64251 chr8 20073976 20073976 1 + C A rs138887483 20073985 + 20073965 20074005 41 GAGGGGCAGATCTATGTGGACAGACAGCTGCACAACAGACA GAGGGGCAGATATATGTGGACAGACAGCTGCACAACAGACA < 41bp 1 0.238858684620891 1 0.187987506389618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20073985 chr8:20073976 synonymous SNV . 0 12 hm5C_associated_SNPs_7806 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:20073949-20073981
64251 chr8 21882131 21882131 1 + C G rs572345500 21882114 + 21882094 21882134 41 TGGAGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTCCAG TGGAGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTGCAG < 41bp 1 0.576534786911151 1 0.297832310199738 experiment 0.846930426177698 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882114 chr8:21882131 . . 0 38 hm5C_associated_SNPs_7808 0 0 2 PRPF8 POSTAR2 ENCODE chr8:21882115-21882153
64251 chr8 21882131 21882131 1 + C G rs572345500 21882116 + 21882096 21882136 41 GAGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTCCAGGT GAGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTGCAGGT < 41bp 1 0.245614016254906 1 0.0516405403614044 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882116 chr8:21882131 . . 0 36 hm5C_associated_SNPs_7809 0 0 2 PRPF8 POSTAR2 ENCODE chr8:21882115-21882153
64251 chr8 21882131 21882131 1 + C G rs572345500 21882117 + 21882097 21882137 41 AGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTCCAGGTG AGTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTGCAGGTG < 41bp 1 0.0827684522301982 1 0.179212391376495 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882117 chr8:21882131 . . 0 35 hm5C_associated_SNPs_7810 0 0 2 PRPF8 POSTAR2 ENCODE chr8:21882115-21882153
64251 chr8 21882131 21882131 1 + C G rs572345500 21882118 + 21882098 21882138 41 GTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTCCAGGTGA GTGGGGCGCGGCAATGCGCCCCTTAACAGCCCTGCAGGTGA < 41bp 1 0.130840618226827 1 0.121904730796814 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882118 chr8:21882131 . . 0 34 hm5C_associated_SNPs_7811 0 0 2 PRPF8 POSTAR2 ENCODE chr8:21882115-21882153
64251 chr8 21882131 21882131 1 + C G rs572345500 21882119 + 21882099 21882139 41 TGGGGCGCGGCAATGCGCCCCTTAACAGCCCTCCAGGTGAT TGGGGCGCGGCAATGCGCCCCTTAACAGCCCTGCAGGTGAT < 41bp 1 0.201820749943597 1 0.312233686447144 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882119 chr8:21882131 . . 0 33 hm5C_associated_SNPs_7812 0 0 2 PRPF8 POSTAR2 ENCODE chr8:21882115-21882153
64251 chr8 21960129 21960129 1 + C T rs547014170 21960138 + 21960118 21960158 41 CGGGCCAGGCTCCTGGGGAGCAGTGAGTACCAAGGGTGCCA CGGGCCAGGCTTCTGGGGAGCAGTGAGTACCAAGGGTGCCA < 41bp 1 0.328785084100434 1 0.41685488820076 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21960138 chr8:21960129 nonsynonymous SNV 0.991 1 12 hm5C_associated_SNPs_7817 0 0 1 PPIG POSTAR2 ENCODE chr8:21960044-21960140
64251 chr8 22022904 22022904 1 + C G rs373839736 22022924 + 22022904 22022944 41 CGCCGCCCCGCCAGCATGCCCGGCGTGGCCCGCCTGCCGCT GGCCGCCCCGCCAGCATGCCCGGCGTGGCCCGCCTGCCGCT < 41bp 1 0.768638002245623 1 0.778416037559509 experiment 0.462723995508755 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP1 ENSG00000168487 UTR5 Human protein_coding chr8:22022924 chr8:22022904 . . 0 1 hm5C_associated_SNPs_7818 3 0 1 DDX24 POSTAR2 ENCODE chr8:22022883-22022918
64251 chr8 22279258 22279258 1 + T C rs76806153 22279252 + 22279232 22279272 41 GCATTCCCAATAGATCCTATCATTCCTTAAACATAATACCC GCATTCCCAATAGATCCTATCATTCCCTAAACATAATACCC < 41bp 1 0.0265948185592852 1 0.0664351284503937 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC39A14 ENSG00000104635 UTR3 Human protein_coding chr8:22279252 chr8:22279258 . . 0 27 hm5C_associated_SNPs_7819 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:22279033-22279561
64251 chr8 22429238 22429238 1 + G A rs150882165 22429234 + 22429214 22429254 41 TTCCTGTCAACTCCCAGAATCTTGGCACCCCTGGTCCAGCT TTCCTGTCAACTCCCAGAATCTTGACACCCCTGGTCCAGCT < 41bp 1 0.385752345043544 1 0.434633880853653 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22429234 chr8:22429238 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_7820 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:22429229-22429264
64251 chr8 22473347 22473347 1 + C G rs143313961 22473327 + 22473307 22473347 41 TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATC TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATG < 41bp 1 0.271948527244744 1 0.272131264209747 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22473327 chr8:22473347 nonsynonymous SNV 0.877 0 41 hm5C_associated_SNPs_7822 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:22473342-22473368
64251 chr8 23118304 23118304 1 + C T rs72609908 23118290 + 23118270 23118310 41 AATTTCTGGAAGCGATGCTCCAAAGGCTTGCTCCCAGCTGT AATTTCTGGAAGCGATGCTCCAAAGGCTTGCTCCTAGCTGT < 41bp 1 0.538751471716129 1 0.605464279651642 experiment 0.922497056567742 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23118290 chr8:23118304 . . 0 35 hm5C_associated_SNPs_7824 0 0 1 YBX3 POSTAR2 ENCODE chr8:23118245-23118314
64251 chr8 23147920 23147920 1 + G A rs189694680 23147913 + 23147893 23147933 41 GTGGCAGAGGAGGAAGAGGACGAAGAGGAGGTGGAAGAGGA GTGGCAGAGGAGGAAGAGGACGAAGAGAAGGTGGAAGAGGA < 41bp 1 0.591169522649628 1 0.732540309429169 experiment 0.817660954700744 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147913 chr8:23147920 nonsynonymous SNV 0.027 0 28 hm5C_associated_SNPs_7825 0 0 2 FTO POSTAR2 ENCODE chr8:23147873-23147935
64251 chr8 23152334 23152334 1 + A C rs15946 23152333 + 23152313 23152353 41 GCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAA GCTCAAGATCCGGCCCCTCACCCAGGGAACCAAGCAGTCAA < 41bp 1 0.715997790701311 1 0.217075854539871 experiment 0.568004418597377 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23152333 chr8:23152334 synonymous SNV . 0 22 hm5C_associated_SNPs_7826 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:23152304-23152336
64251 chr8 23153387 23153387 1 + C T rs375980566 23153369 + 23153349 23153389 41 ACAGCTGGGCCGAGGCCCCACATGTGTCACATGAGAGGCTG ACAGCTGGGCCGAGGCCCCACATGTGTCACATGAGAGGTTG < 41bp 1 0.344854290248114 1 0.0593683421611786 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control R3HCC1 ENSG00000104679 intronic Human protein_coding chr8:23153369 chr8:23153387 . . 0 39 hm5C_associated_SNPs_7827 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr8:23153375-23153395
64251 chr8 23428586 23428586 1 + G C rs558761368 23428603 + 23428583 23428623 41 CAAGATTCAGGCAGGAGAGACGGAAATAGCCACCTTCCAGG CAACATTCAGGCAGGAGAGACGGAAATAGCCACCTTCCAGG < 41bp 1 0.558283983539532 1 0.483725339174271 experiment 0.883432032920936 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A37 ENSG00000147454 intronic Human protein_coding chr8:23428603 chr8:23428586 . . 0 4 hm5C_associated_SNPs_7828 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr8:23428580-23428600
64251 chr8 23428588 23428588 1 + T C rs188142232 23428603 + 23428583 23428623 41 CAAGATTCAGGCAGGAGAGACGGAAATAGCCACCTTCCAGG CAAGACTCAGGCAGGAGAGACGGAAATAGCCACCTTCCAGG < 41bp 1 0.564354623354758 1 0.468925327062607 experiment 0.871290753290485 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A37 ENSG00000147454 intronic Human protein_coding chr8:23428603 chr8:23428588 . . 0 6 hm5C_associated_SNPs_7829 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr8:23428580-23428600
64251 chr8 25149590 25149590 1 + G A rs35475676 25149584 + 25149564 25149604 41 CAGCTGCAGCAGATGACGTACAGCCTGATCGAGTGGCGGTC CAGCTGCAGCAGATGACGTACAGCCTAATCGAGTGGCGGTC < 41bp 1 0.244931717464221 1 0.644474864006042 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149584 chr8:25149590 synonymous SNV . 0 27 hm5C_associated_SNPs_7832 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr8 25149593 25149593 1 + C A rs142717615 25149584 + 25149564 25149604 41 CAGCTGCAGCAGATGACGTACAGCCTGATCGAGTGGCGGTC CAGCTGCAGCAGATGACGTACAGCCTGATAGAGTGGCGGTC < 41bp 1 0.235024288142709 1 0.445205390453339 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149584 chr8:25149593 synonymous SNV . 0 30 hm5C_associated_SNPs_7833 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr8 25149593 25149593 1 + C A rs142717615 25149611 + 25149591 25149631 41 ATCGAGTGGCGGTCCCAGATCCTGTCTGGGACGCTCCCCAA ATAGAGTGGCGGTCCCAGATCCTGTCTGGGACGCTCCCCAA < 41bp 1 0.345176476946412 1 0.667917788028717 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149611 chr8:25149593 synonymous SNV . 0 3 hm5C_associated_SNPs_7834 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr8 25270297 25270297 1 + T C rs144441818 25270287 + 25270267 25270307 41 AGAGATTTCCATTTCTGCTGCCAGAGCTGGTATTTGCCTGC AGAGATTTCCATTTCTGCTGCCAGAGCTGGCATTTGCCTGC < 41bp 1 0.334139781577614 1 0.471562415361404 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DOCK5 ENSG00000147459 UTR3 Human protein_coding chr8:25270287 chr8:25270297 . . 0 31 hm5C_associated_SNPs_7835 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:25270270-25270317
64251 chr8 25270306 25270306 1 + G A rs139487703 25270287 + 25270267 25270307 41 AGAGATTTCCATTTCTGCTGCCAGAGCTGGTATTTGCCTGC AGAGATTTCCATTTCTGCTGCCAGAGCTGGTATTTGCCTAC < 41bp 1 0.302495671910111 1 0.780180394649506 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DOCK5 ENSG00000147459 UTR3 Human protein_coding chr8:25270287 chr8:25270306 . . 0 40 hm5C_associated_SNPs_7836 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:25270270-25270317
64251 chr8 26223857 26223857 1 + C T rs34109536 26223842 + 26223822 26223862 41 TTCCCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTC TTCCCCCAGGTGCATGAATACCTCAGAAGTAAACTTTGTTC < 41bp 1 0.231614213817784 1 0.0443031489849091 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223842 chr8:26223857 synonymous SNV . 0 36 hm5C_associated_SNPs_7837 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223857 26223857 1 + C T rs34109536 26223843 + 26223823 26223863 41 TCCCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTCA TCCCCCAGGTGCATGAATACCTCAGAAGTAAACTTTGTTCA < 41bp 1 0.513591050197875 1 0.240082174539566 experiment 0.972817899604251 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223843 chr8:26223857 synonymous SNV . 0 35 hm5C_associated_SNPs_7838 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223857 26223857 1 + C T rs34109536 26223845 + 26223825 26223865 41 CCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTCACT CCCCAGGTGCATGAATACCTCAGAAGTAAACTTTGTTCACT < 41bp 1 0.614479416694714 1 0.426822066307068 experiment 0.771041166610573 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223845 chr8:26223857 synonymous SNV . 0 33 hm5C_associated_SNPs_7839 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223857 26223857 1 + C T rs34109536 26223855 + 26223835 26223875 41 ATGAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAAT ATGAATACCTCAGAAGTAAACTTTGTTCACTGTATGAAAAT < 41bp 1 0.14039956481017 1 0.0488056242465973 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223855 chr8:26223857 synonymous SNV . 0 23 hm5C_associated_SNPs_7840 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223857 26223857 1 + C T rs34109536 26223862 + 26223842 26223882 41 CCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCA CCTCAGAAGTAAACTTTGTTCACTGTATGAAAATGACTGCA < 41bp 1 0.326418038062608 1 0.203027725219727 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223862 chr8:26223857 synonymous SNV . 0 16 hm5C_associated_SNPs_7841 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223857 26223857 1 + C T rs34109536 26223864 + 26223844 26223884 41 TCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCATA TCAGAAGTAAACTTTGTTCACTGTATGAAAATGACTGCATA < 41bp 1 0.502928196804881 1 0.0952263474464417 experiment 0.994143606390239 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223864 chr8:26223857 synonymous SNV . 0 14 hm5C_associated_SNPs_7842 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26227640 26227640 1 + A G rs3808565 26227656 + 26227636 26227676 41 GTCTATTTTCACAGTGTTGTCATGACTGGATCTTACAATAA GTCTGTTTTCACAGTGTTGTCATGACTGGATCTTACAATAA < 41bp 1 0.491423772305055 1 0.13389840722084 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 intronic Human protein_coding chr8:26227656 chr8:26227640 . . 0 5 hm5C_associated_SNPs_7843 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:26227614-26227725
64251 chr8 26513384 26513384 1 + C T rs539246558 26513368 + 26513348 26513388 41 GAGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCC GAGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCATACCC < 41bp 1 0.104370033012376 1 0.0420572757720947 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513368 chr8:26513384 . . 0 37 hm5C_associated_SNPs_7844 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513369 + 26513349 26513389 41 AGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCCC AGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCATACCCC < 41bp 1 0.157111336368313 1 0.133007943630219 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513369 chr8:26513384 . . 0 36 hm5C_associated_SNPs_7845 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513370 + 26513350 26513390 41 GCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCCCG GCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCATACCCCG < 41bp 1 0.215037511119093 1 0.0681060552597046 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513370 chr8:26513384 . . 0 35 hm5C_associated_SNPs_7846 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513379 + 26513359 26513399 41 TCATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACC TCATGGGGTCCCCCTTGGGGCCCCATACCCCGTCTCTCACC < 41bp 1 0.47973728560889 1 0.0543455481529236 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513379 chr8:26513384 . . 0 26 hm5C_associated_SNPs_7847 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513380 + 26513360 26513400 41 CATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCA CATGGGGTCCCCCTTGGGGCCCCATACCCCGTCTCTCACCA < 41bp 1 0.116721723835507 1 0.12939178943634 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513380 chr8:26513384 . . 0 25 hm5C_associated_SNPs_7848 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513381 + 26513361 26513401 41 ATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCAA ATGGGGTCCCCCTTGGGGCCCCATACCCCGTCTCTCACCAA < 41bp 1 0.143757905649045 1 0.0544551014900208 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513381 chr8:26513384 . . 0 24 hm5C_associated_SNPs_7849 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513384 26513384 1 + C T rs539246558 26513382 + 26513362 26513402 41 TGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCAAG TGGGGTCCCCCTTGGGGCCCCATACCCCGTCTCTCACCAAG < 41bp 1 0.0547352163901931 1 0.144477784633636 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513382 chr8:26513384 . . 0 23 hm5C_associated_SNPs_7850 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:26513339-26513385
64251 chr8 26513388 26513388 1 + C A rs557567699 26513368 + 26513348 26513388 41 GAGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCC GAGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCA < 41bp 1 0.12388964478459 1 0.0411669909954071 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513368 chr8:26513388 . . 0 41 hm5C_associated_SNPs_7851 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513369 + 26513349 26513389 41 AGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCCC AGCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCAC < 41bp 1 0.207802121435479 1 0.219115138053894 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513369 chr8:26513388 . . 0 40 hm5C_associated_SNPs_7852 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513370 + 26513350 26513390 41 GCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCCCG GCAGCCAGTTCATGGGGTCCCCCTTGGGGCCCCACACCACG < 41bp 1 0.168831832199314 1 0.0881535410881042 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513370 chr8:26513388 . . 0 39 hm5C_associated_SNPs_7853 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513379 + 26513359 26513399 41 TCATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACC TCATGGGGTCCCCCTTGGGGCCCCACACCACGTCTCTCACC < 41bp 1 0.409837418227293 1 0.0487689971923828 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513379 chr8:26513388 . . 0 30 hm5C_associated_SNPs_7854 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513380 + 26513360 26513400 41 CATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCA CATGGGGTCCCCCTTGGGGCCCCACACCACGTCTCTCACCA < 41bp 1 0.0833796582543285 1 0.081987053155899 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513380 chr8:26513388 . . 0 29 hm5C_associated_SNPs_7855 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513381 + 26513361 26513401 41 ATGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCAA ATGGGGTCCCCCTTGGGGCCCCACACCACGTCTCTCACCAA < 41bp 1 0.290150876297672 1 0.0626618266105652 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513381 chr8:26513388 . . 0 28 hm5C_associated_SNPs_7856 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26513388 26513388 1 + C A rs557567699 26513382 + 26513362 26513402 41 TGGGGTCCCCCTTGGGGCCCCACACCCCGTCTCTCACCAAG TGGGGTCCCCCTTGGGGCCCCACACCACGTCTCTCACCAAG < 41bp 1 0.165691496665687 1 0.310240864753723 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26513382 chr8:26513388 . . 0 27 hm5C_associated_SNPs_7857 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:26513353-26513389
64251 chr8 26514293 26514293 1 + G A rs1058332 26514273 + 26514253 26514293 41 CTAGAGTGTGGGACCCTGGCCAAGTGCAGGAATGGGCCATG CTAGAGTGTGGGACCCTGGCCAAGTGCAGGAATGGGCCATA < 41bp 1 0.665974021574687 1 0.772988557815552 experiment 0.668051956850626 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26514273 chr8:26514293 . . 0 41 hm5C_associated_SNPs_7858 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr8:26514250-26514294
64251 chr8 26515400 26515400 1 + C T rs73569815 26515416 + 26515396 26515436 41 AAATCGACAGTGTCTCAGAACTGAATAACTGCAGTGACTTG AAATTGACAGTGTCTCAGAACTGAATAACTGCAGTGACTTG < 41bp 1 0.45274481315919 1 0.112804770469666 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 UTR3 Human protein_coding chr8:26515416 chr8:26515400 . . 0 5 hm5C_associated_SNPs_7859 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:26515380-26515400
64251 chr8 27288501 27288501 1 + A G rs201457448 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGGCTTCGCCAACGTCGACCAGGAGACCTACCGCTGTGAA < 41bp 1 0.733853333658499 1 0.96644926071167 experiment 0.532293332683001 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288501 nonsynonymous SNV 0.975 2 15 hm5C_associated_SNPs_7860 0 0 2 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr8 27288514 27288514 1 + C A rs61738530 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGGCTTCGCCAACATCGACCAGGAGAACTACCGCTGTGAA < 41bp 1 0.718634716902657 1 0.96591579914093 experiment 0.562730566194686 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288514 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_7861 0 0 3 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr8 27369416 27369416 1 + G A rs574326427 27369415 + 27369395 27369435 41 AGTGACATGAGCCATGGGTACGTGACAGTAAAGGTGAGTCA AGTGACATGAGCCATGGGTACATGACAGTAAAGGTGAGTCA < 41bp 1 0.625645600500212 1 0.275936216115952 experiment 0.748708798999575 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27369415 chr8:27369416 nonsynonymous SNV 0.064 4 22 hm5C_associated_SNPs_7862 0 0 8 BUD13 POSTAR2 ENCODE chr8:27369407-27369511
64251 chr8 27402373 27402373 1 + G A rs112182784 27402368 + 27402348 27402388 41 GCATAGTTTGGCAGAAAAATCAGCCGTTCATTTAGAAGAAT GCATAGTTTGGCAGAAAAATCAGCCATTCATTTAGAAGAAT < 41bp 1 0.557732982011775 1 0.22804844379425 experiment 0.88453403597645 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EPHX2 ENSG00000120915 UTR3 Human protein_coding chr8:27402368 chr8:27402373 . . 0 26 hm5C_associated_SNPs_7863 0 0 1 LSM11 POSTAR2 ENCODE chr8:27402286-27402373
64251 chr8 27491676 27491676 1 + C T rs199997030 27491690 + 27491670 27491710 41 TCCAGCCGCCTGCAGCGGGGCCCTCCTGAGGCCCCAGAGGA TCCAGCTGCCTGCAGCGGGGCCCTCCTGAGGCCCCAGAGGA < 41bp 1 0.132847284432097 1 0.0810327231884003 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control SCARA3 ENSG00000168077 UTR5 Human protein_coding chr8:27491690 chr8:27491676 . . 0 7 hm5C_associated_SNPs_7864 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27491657-27491680
64251 chr8 27491676 27491676 1 + C T rs199997030 27491691 + 27491671 27491711 41 CCAGCCGCCTGCAGCGGGGCCCTCCTGAGGCCCCAGAGGAA CCAGCTGCCTGCAGCGGGGCCCTCCTGAGGCCCCAGAGGAA < 41bp 1 0.177424041905386 1 0.140509724617004 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SCARA3 ENSG00000168077 UTR5 Human protein_coding chr8:27491691 chr8:27491676 . . 0 6 hm5C_associated_SNPs_7865 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27491657-27491680
64251 chr8 28048167 28048167 1 + C T rs12675842 28048163 + 28048143 28048183 41 GTGGCGCAATCTCACTGCATCCTCCGCCTCCCGGGTTCAAG GTGGCGCAATCTCACTGCATCCTCTGCCTCCCGGGTTCAAG < 41bp 1 0.129264266201275 1 0.0178674459457397 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ELP3 ENSG00000134014 UTR3 Human protein_coding chr8:28048163 chr8:28048167 . . 0 25 hm5C_associated_SNPs_7867 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:28048148-28048180
64251 chr8 28573473 28573473 1 + C T rs141604623 28573455 + 28573435 28573475 41 CATTTTATTTGGTGCCTTGTCTGGGGAGCACACTAACTCTT CATTTTATTTGGTGCCTTGTCTGGGGAGCACACTAACTTTT < 41bp 1 0.655881758118932 1 0.824334561824799 experiment 0.688236483762136 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EXTL3 ENSG00000012232 UTR5 Human protein_coding chr8:28573455 chr8:28573473 . . 0 39 hm5C_associated_SNPs_7870 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:28573448-28573477
64251 chr8 30242416 30242416 1 + C T rs553201780 30242412 + 30242392 30242432 41 TCCTGAGTCGCCCGCCGCCGCCGTCGCAGACTCGCCGCGGG TCCTGAGTCGCCCGCCGCCGCCGTTGCAGACTCGCCGCGGG < 41bp 1 0.518098660803732 1 0.335666239261627 experiment 0.963802678392537 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBPMS-AS1 ENSG00000254109 ncRNA_intronic Human antisense chr8:30242412 chr8:30242416 . . 0 25 hm5C_associated_SNPs_7871 0 0 5 DDX59 POSTAR2 ENCODE chr8:30242374-30242453
64251 chr8 30623803 30623803 1 + T G rs115749166 30623821 + 30623801 30623841 41 CTTCCTTTCCCAGACGGCCTCTGGCAGTGGAGGGAGGCCAG CTGCCTTTCCCAGACGGCCTCTGGCAGTGGAGGGAGGCCAG < 41bp 1 0.657909983639411 1 0.558465480804443 experiment 0.684180032721177 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30623821 chr8:30623803 . 0.852 0 3 hm5C_associated_SNPs_7872 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr8:30623792-30623813
64251 chr8 31024733 31024733 1 + G C rs186424616 31024734 + 31024714 31024754 41 AGAAGCAAGGAAGAAGTAGGCATCAATACTGAGGTATTAAT AGAAGCAAGGAAGAAGTAGCCATCAATACTGAGGTATTAAT < 41bp 1 0.301343878771142 1 0.437572658061981 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WRN ENSG00000165392 CDS Human protein_coding chr8:31024734 chr8:31024733 nonsynonymous SNV 0.199 0 20 hm5C_associated_SNPs_7873 0 0 1 UCHL5 POSTAR2 ENCODE chr8:31024733-31024745
64251 chr8 37553333 37553333 1 + T C rs568628511 37553336 + 37553316 37553356 41 GCCGGGGCCAGCGGCGGTGGCGGCGGCGGCGGAGGCGTCGG GCCGGGGCCAGCGGCGGCGGCGGCGGCGGCGGAGGCGTCGG < 41bp 1 0.798964119157637 1 0.939750730991364 experiment 0.402071761684725 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF703 ENSG00000183779 UTR5 Human protein_coding chr8:37553336 chr8:37553333 . . 0 18 hm5C_associated_SNPs_7874 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:37553300-37553340
64251 chr8 37553333 37553333 1 + T C rs568628511 37553351 + 37553331 37553371 41 GGTGGCGGCGGCGGCGGAGGCGTCGGTGGAGGAGGGGAGGC GGCGGCGGCGGCGGCGGAGGCGTCGGTGGAGGAGGGGAGGC < 41bp 1 0.72933115801557 1 0.883166551589966 experiment 0.54133768396886 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF703 ENSG00000183779 UTR5 Human protein_coding chr8:37553351 chr8:37553333 . . 0 3 hm5C_associated_SNPs_7875 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:37553300-37553340
64251 chr8 37554668 37554668 1 + C A rs76445150 37554680 + 37554660 37554700 41 CAGCTGGACGCCAAGAAGAGCCCCTTGGCGCTGCTGGCTCA CAGCTGGAAGCCAAGAAGAGCCCCTTGGCGCTGCTGGCTCA < 41bp 1 0.156348062048693 1 0.22454622387886 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF703 ENSG00000183779 CDS Human protein_coding chr8:37554680 chr8:37554668 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_7876 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:37554645-37554675
64251 chr8 37914689 37914689 1 + C T rs201186533 37914699 + 37914679 37914719 41 CCCACCATTCCGGGGGTCACCAGCCCTTCCAGTGATGAGCC CCCACCATTCTGGGGGTCACCAGCCCTTCCAGTGATGAGCC < 41bp 1 0.549679172899546 1 0.482555270195007 experiment 0.900641654200908 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4EBP1 ENSG00000187840 CDS Human protein_coding chr8:37914699 chr8:37914689 nonsynonymous SNV 0.154 4 11 hm5C_associated_SNPs_7878 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:37914600-37914695
64251 chr8 38831059 38831059 1 + A G rs7295 38831058 + 38831038 38831078 41 GAGCTTTGTTTATAAACTTTCAAAATGTCGGAAGTGGACAG GAGCTTTGTTTATAAACTTTCGAAATGTCGGAAGTGGACAG < 41bp 1 0.569602656231653 1 0.88218766450882 experiment 0.860794687536695 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHA2 ENSG00000169499 UTR3 Human protein_coding chr8:38831058 chr8:38831059 . . 0 22 hm5C_associated_SNPs_7880 0 0 2 ELAVL1 POSTAR2 GSE29943,GSM741175 chr8:38831040-38831060
64251 chr8 38899570 38899570 1 + T C rs78451751 38899577 + 38899557 38899597 41 CTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTG CTGATGAAGCCTACAGTGCTCCCTCCTGTGGTAATAAGTTG < 41bp 1 0.0967992519329792 1 0.0946750640869141 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899577 chr8:38899570 synonymous SNV . 0 14 hm5C_associated_SNPs_7881 1 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr8 38899570 38899570 1 + T C rs78451751 38899581 + 38899561 38899601 41 TGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG TGAAGCCTACAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG < 41bp 1 0.180695872976099 1 0.597919225692749 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899581 chr8:38899570 synonymous SNV . 0 10 hm5C_associated_SNPs_7882 1 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr8 41355096 41355096 1 + C T rs17656952 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTTGGCGGCCAGTCATATCTCGAAGGTTGT < 41bp 1 0.13170485894955 1 0.165201902389526 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355096 synonymous SNV . 0 14 hm5C_associated_SNPs_7883 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:41355065-41355101
64251 chr8 42226805 42226805 1 + C G rs3136797 42226797 + 42226777 42226817 41 TGTTCATTTTAGGGTGTTTGCCAGCTTCCCAGTAAAAATGA TGTTCATTTTAGGGTGTTTGCCAGCTTCGCAGTAAAAATGA < 41bp 1 0.314359608668353 1 0.412336885929108 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLB ENSG00000070501 CDS Human protein_coding chr8:42226797 chr8:42226805 nonsynonymous SNV 0.978 1 29 hm5C_associated_SNPs_7898 0 1 1 IGF2BP1 POSTAR2 ENCODE chr8:42226788-42226817
64251 chr8 42752245 42752245 1 + G A rs367925456 42752240 + 42752220 42752260 41 GAGCGGCGGCGGTGTCTGGCCAGGCGGTAGGCGCTGCCTGG GAGCGGCGGCGGTGTCTGGCCAGGCAGTAGGCGCTGCCTGG < 41bp 1 0.760933733489275 1 0.797325730323792 experiment 0.478132533021449 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HOOK3 ENSG00000168172 UTR5 Human protein_coding chr8:42752240 chr8:42752245 . . 0 26 hm5C_associated_SNPs_7899 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:42752220-42752245
64251 chr8 42752245 42752245 1 + G A rs367925456 42752244 + 42752224 42752264 41 GGCGGCGGTGTCTGGCCAGGCGGTAGGCGCTGCCTGGCCGC GGCGGCGGTGTCTGGCCAGGCAGTAGGCGCTGCCTGGCCGC < 41bp 1 0.774175923610412 1 0.550630927085876 experiment 0.451648152779176 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HOOK3 ENSG00000168172 UTR5 Human protein_coding chr8:42752244 chr8:42752245 . . 0 22 hm5C_associated_SNPs_7900 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:42752220-42752245
64251 chr8 42752245 42752245 1 + G A rs367925456 42752256 + 42752236 42752276 41 TGGCCAGGCGGTAGGCGCTGCCTGGCCGCGGCGGGGAAGAT TGGCCAGGCAGTAGGCGCTGCCTGGCCGCGGCGGGGAAGAT < 41bp 1 0.365286193079714 1 0.0496912896633148 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HOOK3 ENSG00000168172 UTR5 Human protein_coding chr8:42752256 chr8:42752245 . . 0 10 hm5C_associated_SNPs_7901 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:42752220-42752245
64251 chr8 42752245 42752245 1 + G A rs367925456 42752257 + 42752237 42752277 41 GGCCAGGCGGTAGGCGCTGCCTGGCCGCGGCGGGGAAGATG GGCCAGGCAGTAGGCGCTGCCTGGCCGCGGCGGGGAAGATG < 41bp 1 0.708964977379429 1 0.0599156022071838 experiment 0.582070045241142 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HOOK3 ENSG00000168172 UTR5 Human protein_coding chr8:42752257 chr8:42752245 . . 0 9 hm5C_associated_SNPs_7902 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:42752220-42752245
64251 chr8 42752245 42752245 1 + G A rs367925456 42752261 + 42752241 42752281 41 AGGCGGTAGGCGCTGCCTGGCCGCGGCGGGGAAGATGTTCA AGGCAGTAGGCGCTGCCTGGCCGCGGCGGGGAAGATGTTCA < 41bp 1 0.56493690548946 1 0.271091401576996 experiment 0.870126189021079 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HOOK3 ENSG00000168172 UTR5 Human protein_coding chr8:42752261 chr8:42752245 . . 0 5 hm5C_associated_SNPs_7903 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:42752220-42752245
64251 chr8 48877227 48877227 1 + T C rs145966797 48877243 + 48877223 48877263 41 ACCATTCAACGCATTGAAGACTAAGAATATGAGAAACCTGA ACCACTCAACGCATTGAAGACTAAGAATATGAGAAACCTGA < 41bp 1 0.182768517911881 1 0.378124624490738 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48877243 chr8:48877227 nonsynonymous SNV 0.983 2 5 hm5C_associated_SNPs_7927 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48877178-48877270
64251 chr8 48889535 48889535 1 + T C rs17334542 48889518 + 48889498 48889538 41 GTATCTGTTTTCATTTTTTTCACGTTATAAATAAAAATACT GTATCTGTTTTCATTTTTTTCACGTTATAAATAAAAACACT < 41bp 1 0.381431338173762 1 0.407413095235825 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCM4 ENSG00000104738 UTR3 Human protein_coding chr8:48889518 chr8:48889535 . . 0 38 hm5C_associated_SNPs_7928 0 0 42 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:48889443-48889541
64251 chr8 56866452 56866452 1 + G A rs2227980 56866453 + 56866433 56866473 41 TTAGTCCCAAGCCACAGAAGCCATGGGATAAAGATGCCTGG TTAGTCCCAAGCCACAGAAACCATGGGATAAAGATGCCTGG < 41bp 1 0.133566549020738 1 0.319285571575165 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56866453 chr8:56866452 synonymous SNV . 0 20 hm5C_associated_SNPs_7935 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:56866449-56866476
64251 chr8 61533373 61533373 1 + T C rs368529941 61533362 + 61533342 61533382 41 GTCTAGCTGCCCAACGGGGCCTACTCACTTATTCTTTCACC GTCTAGCTGCCCAACGGGGCCTACTCACTTACTCTTTCACC < 41bp 1 0.43928056696383 1 0.0357897877693176 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB2A ENSG00000104388 UTR3 Human protein_coding chr8:61533362 chr8:61533373 . . 0 32 hm5C_associated_SNPs_7936 0 0 30 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:61533342-61533392
64251 chr8 64099240 64099240 1 + G A rs61740399 64099222 + 64099202 64099242 41 TTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAGTG TTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAATG < 41bp 1 0.652564659460727 1 0.113370835781097 experiment 0.694870681078547 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64099222 chr8:64099240 nonsynonymous SNV 0.991 0 39 hm5C_associated_SNPs_7937 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:64099220-64099240
64251 chr8 64099587 64099587 1 + C T rs568180760 64099584 + 64099564 64099604 41 AAGGACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCT AAGGACCTCAGCCACAGGCCCAGTCTCACCAAGTGCAGCCT < 41bp 1 0.174174619791384 1 0.0640577077865601 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64099584 chr8:64099587 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_7938 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:64099580-64099600
64251 chr8 64124956 64124956 1 + G A rs7464 64124955 + 64124935 64124975 41 GCTGTGTTCTTTTTGAATACCGTGCATGGGGGTTAAGCTGA GCTGTGTTCTTTTTGAATACCATGCATGGGGGTTAAGCTGA < 41bp 1 0.292761599097186 1 0.146326631307602 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YTHDF3 ENSG00000185728 UTR3 Human protein_coding chr8:64124955 chr8:64124956 . . 0 22 hm5C_associated_SNPs_7939 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr8:64124895-64124981
64251 chr8 67026244 67026244 1 + G A rs111543839 67026224 + 67026204 67026244 41 CGGGAAGCTGTGCCCGCTCCCTTCGATAGCTCAGCTGGTAG CGGGAAGCTGTGCCCGCTCCCTTCGATAGCTCAGCTGGTAA < 41bp 1 0.531644196193229 1 0.64430183172226 experiment 0.936711607613542 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026224 chr8:67026244 . . 0 41 hm5C_associated_SNPs_7941 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026227 + 67026207 67026247 41 GAAGCTGTGCCCGCTCCCTTCGATAGCTCAGCTGGTAGAGC GAAGCTGTGCCCGCTCCCTTCGATAGCTCAGCTGGTAAAGC < 41bp 1 0.528502856054905 1 0.308052390813828 experiment 0.94299428789019 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026227 chr8:67026244 . . 0 38 hm5C_associated_SNPs_7942 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026233 + 67026213 67026253 41 GTGCCCGCTCCCTTCGATAGCTCAGCTGGTAGAGCGGAGGA GTGCCCGCTCCCTTCGATAGCTCAGCTGGTAAAGCGGAGGA < 41bp 1 0.709146464187562 1 0.13648709654808 experiment 0.581707071624876 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026233 chr8:67026244 . . 0 32 hm5C_associated_SNPs_7943 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026235 + 67026215 67026255 41 GCCCGCTCCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACT GCCCGCTCCCTTCGATAGCTCAGCTGGTAAAGCGGAGGACT < 41bp 1 0.596100751177741 1 0.31552129983902 experiment 0.807798497644518 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026235 chr8:67026244 . . 0 30 hm5C_associated_SNPs_7944 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026238 + 67026218 67026258 41 CGCTCCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTA CGCTCCCTTCGATAGCTCAGCTGGTAAAGCGGAGGACTGTA < 41bp 1 0.569590256834401 1 0.305661618709564 experiment 0.860819486331198 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026238 chr8:67026244 . . 0 27 hm5C_associated_SNPs_7945 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026254 + 67026234 67026274 41 TCAGCTGGTAGAGCGGAGGACTGTAGGCGCGCGCCCGTGGC TCAGCTGGTAAAGCGGAGGACTGTAGGCGCGCGCCCGTGGC < 41bp 1 0.76342913890368 1 0.351863294839859 experiment 0.47314172219264 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026254 chr8:67026244 . . 0 11 hm5C_associated_SNPs_7946 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026261 + 67026241 67026281 41 GTAGAGCGGAGGACTGTAGGCGCGCGCCCGTGGCCATCCTT GTAAAGCGGAGGACTGTAGGCGCGCGCCCGTGGCCATCCTT < 41bp 1 0.775113230258538 1 0.482326954603195 experiment 0.449773539482925 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026261 chr8:67026244 . . 0 4 hm5C_associated_SNPs_7947 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67026244 67026244 1 + G A rs111543839 67026263 + 67026243 67026283 41 AGAGCGGAGGACTGTAGGCGCGCGCCCGTGGCCATCCTTAG AAAGCGGAGGACTGTAGGCGCGCGCCCGTGGCCATCCTTAG < 41bp 1 0.653753552511966 1 0.357732772827148 experiment 0.692492894976068 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DNAJC5B;TRIM55 ENSG00000253190 ncRNA_intronic Human lincRNA chr8:67026263 chr8:67026244 . . 0 2 hm5C_associated_SNPs_7948 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr8:67026200-67026280
64251 chr8 67341362 67341362 1 + G A rs144911629 67341375 + 67341355 67341395 41 CGAGCCGGAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGCT CGAGCCGAAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGCT < 41bp 1 0.541879592074249 1 0.356085419654846 experiment 0.916240815851502 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRS1 ENSG00000179041 UTR5 Human protein_coding chr8:67341375 chr8:67341362 . . 0 8 hm5C_associated_SNPs_7949 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr8:67341340-67341380
64251 chr8 67341378 67341378 1 + G A rs3739334 67341375 + 67341355 67341395 41 CGAGCCGGAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGCT CGAGCCGGAGCCATGGAGGGCCAAAGCGTGGAGGAGCTGCT < 41bp 1 0.324747183151594 1 0.394658833742142 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341375 chr8:67341378 synonymous SNV . 0 24 hm5C_associated_SNPs_7950 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr8:67341340-67341380
64251 chr8 74207430 74207430 1 + C G rs561630500 74207436 + 74207416 74207456 41 TCTCGTCCCGGCCTCTGTGACAAGCGCCCCGGAGCCGGGAG TCTCGTCCCGGCCTGTGTGACAAGCGCCCCGGAGCCGGGAG < 41bp 1 0.70824193139489 1 0.760295033454895 experiment 0.583516137210221 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RDH10 ENSG00000121039 UTR5 Human protein_coding chr8:74207436 chr8:74207430 . . 0 15 hm5C_associated_SNPs_7952 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585666 chr8:74207412-74207432
64251 chr8 74235980 74235980 1 + A C rs7814695 74235974 + 74235954 74235994 41 ACGGCTCACTGCAATCTCTGCCTCCCAGTTTCAAGTGATTC ACGGCTCACTGCAATCTCTGCCTCCCCGTTTCAAGTGATTC < 41bp 1 0.020794232798513 1 0.0574997961521149 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RDH10-AS1 ENSG00000250295 ncRNA_intronic Human antisense chr8:74235974 chr8:74235980 . . 0 27 hm5C_associated_SNPs_7953 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr8:74235961-74235982
64251 chr8 87526724 87526724 1 + A C rs144996394 87526741 + 87526721 87526761 41 GCCAACCTGTTCTCCACCGTCGCTCGACTTCCACCTCTAAG GCCCACCTGTTCTCCACCGTCGCTCGACTTCCACCTCTAAG < 41bp 1 0.349451273283941 1 0.271183162927628 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE3 ENSG00000085719 UTR5 Human protein_coding chr8:87526741 chr8:87526724 . . 0 4 hm5C_associated_SNPs_7962 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:87526700-87526740
64251 chr8 87572330 87572330 1 + G A rs533282151 87572331 + 87572311 87572351 41 GTGCTGTTAACTGGGGAAGGCATCTAACTAGTAGCCTGCTA GTGCTGTTAACTGGGGAAGACATCTAACTAGTAGCCTGCTA < 41bp 1 0.559779416351803 1 0.0848193168640137 experiment 0.880441167296393 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CPNE3 ENSG00000085719 UTR3 Human protein_coding chr8:87572331 chr8:87572330 . . 0 20 hm5C_associated_SNPs_7963 0 0 12 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr8:87572295-87572348
64251 chr8 87572903 87572903 1 + A G rs150559243 87572900 + 87572880 87572920 41 CATAAGAACTGTGATTCCAGCAAACTAGGGTAATTGGTGCC CATAAGAACTGTGATTCCAGCAAGCTAGGGTAATTGGTGCC < 41bp 1 0.565941789048802 1 0.742050528526306 experiment 0.868116421902395 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE3 ENSG00000085719 UTR3 Human protein_coding chr8:87572900 chr8:87572903 . . 0 24 hm5C_associated_SNPs_7964 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr8:87572857-87572915
64251 chr8 90770315 90770315 1 + C T rs2293809 90770303 + 90770283 90770323 41 GGGACCATGAACGGGGAGGCCATCTGCAGCGCCCTGCCCAC GGGACCATGAACGGGGAGGCCATCTGCAGCGCTCTGCCCAC < 41bp 1 0.704153015242877 1 0.222170293331146 experiment 0.591693969514247 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90770303 chr8:90770315 synonymous SNV . 0 33 hm5C_associated_SNPs_7965 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:90770310-90770346
64251 chr8 92090657 92090657 1 + C A rs143832637 92090658 + 92090638 92090678 41 ATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA ATTGAAAACTTAACAGGAGACAGACATATGGAAAGTGAGAA < 41bp 1 0.496625970360612 1 0.292937755584717 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92090658 chr8:92090657 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_7970 0 0 5 BUD13 POSTAR2 ENCODE chr8:92090657-92090702
64251 chr8 95803750 95803750 1 + A G rs11025 95803740 + 95803720 95803760 41 CTCAGGTTGACTCTGTACATCTGAATAGTGAGTCACTAGTA CTCAGGTTGACTCTGTACATCTGAATAGTGGGTCACTAGTA < 41bp 1 0.781871615981793 1 0.453747987747192 experiment 0.436256768036414 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPY19L4 ENSG00000156162 UTR3 Human protein_coding chr8:95803740 chr8:95803750 . . 0 31 hm5C_associated_SNPs_7971 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:95803681-95803834
64251 chr8 96037287 96037287 1 + C A rs113557846 96037302 + 96037282 96037322 41 GGCATCCCCGGCCTGTGCTGCCGCCGGCCGCCTCTGGGTCT GGCATACCCGGCCTGTGCTGCCGCCGGCCGCCTCTGGGTCT < 41bp 1 0.299787684112711 1 0.263301193714142 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96037302 chr8:96037287 synonymous SNV . 0 6 hm5C_associated_SNPs_7973 1 0 3 DDX3X POSTAR2 ENCODE chr8:96037268-96037318
64251 chr8 97506103 97506103 1 + T A rs562234217 97506084 + 97506064 97506104 41 CGCGGATCGCGCGCTCCCGCCGCTCTGCCCCTAAACTTCTG CGCGGATCGCGCGCTCCCGCCGCTCTGCCCCTAAACTTCAG < 41bp 1 0.204367493691445 1 0.114405393600464 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SDC2 ENSG00000169439 UTR5 Human protein_coding chr8:97506084 chr8:97506103 . . 0 40 hm5C_associated_SNPs_7974 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:97506076-97506121
64251 chr8 97657582 97657582 1 + T G rs528850549 97657596 + 97657576 97657616 41 GCGAGCTTAGTCCTGGGAGCCGCCTCCGTCGCCGCCGTCAG GCGAGCGTAGTCCTGGGAGCCGCCTCCGTCGCCGCCGTCAG < 41bp 1 0.619548025976129 1 0.640456140041351 experiment 0.760903948047743 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CPQ ENSG00000104324 UTR5 Human protein_coding chr8:97657596 chr8:97657582 . . 0 7 hm5C_associated_SNPs_7975 0 0 5 DDX3X POSTAR2 ENCODE chr8:97657494-97657628
64251 chr8 98657020 98657020 1 + C A rs113646142 98657015 + 98656995 98657035 41 CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCG CAAGCGGGAGGAGGCGGCGGCCGTGACGGCCGCGGCCCCCG < 41bp 1 0.596527237941985 1 0.575117528438568 experiment 0.80694552411603 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657015 chr8:98657020 nonsynonymous SNV 0.039 1 26 hm5C_associated_SNPs_7976 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:98657019-98657020
64251 chr8 98657020 98657020 1 + C A rs113646142 98657027 + 98657007 98657047 41 GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT GGCGGCGGCCGTGACGGCCGCGGCCCCCGACGACCTGGCCT < 41bp 1 0.75811597639578 1 0.770707011222839 experiment 0.48376804720844 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657027 chr8:98657020 nonsynonymous SNV 0.039 1 14 hm5C_associated_SNPs_7977 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:98657019-98657020
64251 chr8 98657041 98657041 1 + C G rs188271601 98657024 + 98657004 98657044 41 GGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGG GGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACGTGG < 41bp 1 0.774888686257127 1 0.428721606731415 experiment 0.450222627485745 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657024 chr8:98657041 nonsynonymous SNV 0.112 0 38 hm5C_associated_SNPs_7978 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067861 chr8:98657040-98657060
64251 chr8 98657041 98657041 1 + C G rs188271601 98657027 + 98657007 98657047 41 GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACGTGGCCT < 41bp 1 0.757295145813465 1 0.691762328147888 experiment 0.48540970837307 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657027 chr8:98657041 nonsynonymous SNV 0.112 0 35 hm5C_associated_SNPs_7979 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067861 chr8:98657040-98657060
64251 chr8 100182333 100182333 1 + G C rs140848350 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACCACTTATTCCCTCTTTCAGC < 41bp 1 0.0509726506884614 1 0.0569774508476257 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182333 nonsynonymous SNV 0.987 0 24 hm5C_associated_SNPs_7982 3 0 1 EIF3D POSTAR2 ENCODE chr8:100182316-100182392
64251 chr8 101165832 101165832 1 + T C rs148821867 101165850 + 101165830 101165870 41 TATGTGAATGTGGTTGGTCTCTCTTGCTTTCAAAATATCTT TACGTGAATGTGGTTGGTCTCTCTTGCTTTCAAAATATCTT < 41bp 1 0.349980927341397 1 0.0964289903640747 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLR2K ENSG00000147669 UTR3 Human protein_coding chr8:101165850 chr8:101165832 . . 0 3 hm5C_associated_SNPs_7983 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:101165753-101165919
64251 chr8 104083993 104083993 1 + T C rs2515205 104083982 + 104083962 104084002 41 CAGCCCCCAAGTAGCTGGGCCTACAGGTGCGTGCTACCACG CAGCCCCCAAGTAGCTGGGCCTACAGGTGCGCGCTACCACG < 41bp 1 0.727910249747802 1 0.630043864250183 experiment 0.544179500504396 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATP6V1C1 ENSG00000155097 UTR3 Human protein_coding chr8:104083982 chr8:104083993 . . 0 32 hm5C_associated_SNPs_7985 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:104083988-104084018
64251 chr8 104084091 104084091 1 + C T rs112544791 104084100 + 104084080 104084120 41 AGGGATCCTCCCGCCTCAGCCTCCCAAAGTGCTGGTGTTAC AGGGATCCTCCTGCCTCAGCCTCCCAAAGTGCTGGTGTTAC < 41bp 1 0.43122749673249 1 0.261339068412781 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6V1C1 ENSG00000155097 UTR3 Human protein_coding chr8:104084100 chr8:104084091 . . 0 12 hm5C_associated_SNPs_7986 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr8:104084079-104084122
64251 chr8 104432659 104432659 1 + G A rs143025416 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCAGAGAAGCTGACTACTGTCCTTTCTGGGGCGTGTGATGG < 41bp 1 0.0747703881128989 1 0.0504245162010193 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432659 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_7988 0 0 5 FXR2 POSTAR2 ENCODE chr8:104432505-104432661
64251 chr8 104432670 104432670 1 + T C rs146162905 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCAGAGAAGCTGGCTACTGTCCTCTCTGGGGCGTGTGATGG < 41bp 1 0.217869105911276 1 0.200789421796799 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432670 synonymous SNV . 0 24 hm5C_associated_SNPs_7989 0 0 4 EFTUD2 POSTAR2 ENCODE chr8:104432665-104432718
64251 chr8 104432679 104432679 1 + G A rs140817247 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCATGTGATGG < 41bp 1 0.0991056657652332 1 0.0509164035320282 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432679 synonymous SNV . 0 33 hm5C_associated_SNPs_7990 0 0 5 EFTUD2 POSTAR2 ENCODE chr8:104432665-104432718
64251 chr8 104438333 104438333 1 + A G rs185916745 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCAGGCTGTGGAGACGAGGAAGAGCC < 41bp 1 0.652012243873526 1 0.488642185926437 experiment 0.695975512252949 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438333 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_7991 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr8 104438340 104438340 1 + C T rs113982117 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCAGGCTATGGAGATGAGGAAGAGCC < 41bp 1 0.463149632880263 1 0.274929493665695 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438340 synonymous SNV . 0 30 hm5C_associated_SNPs_7992 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr8 104438346 104438346 1 + A G rs367722339 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAGGAGCC < 41bp 1 0.53236861467128 1 0.339720249176025 experiment 0.93526277065744 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438346 synonymous SNV . 0 36 hm5C_associated_SNPs_7993 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr8 104452460 104452460 1 + T C rs139400754 104452461 + 104452441 104452481 41 GATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAATGCT GATCTGATGAAATGAACATCCGCCTGTGGAAAGCTAATGCT < 41bp 1 0.704617154516913 1 0.245075881481171 experiment 0.590765690966174 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452461 chr8:104452460 synonymous SNV . 0 20 hm5C_associated_SNPs_7994 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104452376-104452483
64251 chr8 120220762 120220762 1 + C G rs552500910 120220765 + 120220745 120220785 41 CCGAACCCCGCCGTGTCCTTCCCGCCGCCCCGGGGTCACCC CCGAACCCCGCCGTGTCGTTCCCGCCGCCCCGGGGTCACCC < 41bp 1 0.704442483001194 1 0.17110338807106 experiment 0.591115033997611 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MAL2 ENSG00000147676 CDS Human protein_coding chr8:120220765 chr8:120220762 synonymous SNV . 0 18 hm5C_associated_SNPs_7997 0 0 3 DDX3X POSTAR2 ENCODE chr8:120220744-120220775
64251 chr8 124219915 124219915 1 + C T rs74938406 124219901 + 124219881 124219921 41 CTGACTCCAACCTGGAGGCCCTTCCTGCAGGCCTCCCCTCA CTGACTCCAACCTGGAGGCCCTTCCTGCAGGCCTTCCCTCA < 41bp 1 0.134426574104861 1 0.026922881603241 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 CDS Human protein_coding chr8:124219901 chr8:124219915 nonsynonymous SNV 0.606 1 35 hm5C_associated_SNPs_8003 0 0 6 IGF2BP1 POSTAR2 ENCODE chr8:124219825-124219932
64251 chr8 124220450 124220450 1 + T C rs138198901 124220443 + 124220423 124220463 41 TCGGGAGAGTTGGGGAAACTCCTCCTCTTAGGAAAGGCTAA TCGGGAGAGTTGGGGAAACTCCTCCTCCTAGGAAAGGCTAA < 41bp 1 0.117398043022864 1 0.358798444271088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220443 chr8:124220450 . . 0 28 hm5C_associated_SNPs_8004 0 0 4 DDX6 POSTAR2 ENCODE chr8:124220422-124220513
64251 chr8 124220700 124220700 1 + G A rs115042207 124220703 + 124220683 124220723 41 GGAGCTTGAGTTGTCAGGGGCCAGGACTGGCCCCACTGCAG GGAGCTTGAGTTGTCAGAGGCCAGGACTGGCCCCACTGCAG < 41bp 1 0.569146264547596 1 0.76548308134079 experiment 0.861707470904808 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220703 chr8:124220700 . . 0 18 hm5C_associated_SNPs_8005 0 0 2 UPF1 POSTAR2 ENCODE chr8:124220626-124220719
64251 chr8 124220700 124220700 1 + G A rs115042207 124220713 + 124220693 124220733 41 TTGTCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCC TTGTCAGAGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCC < 41bp 1 0.638993914206681 1 0.404255151748657 experiment 0.722012171586639 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220713 chr8:124220700 . . 0 8 hm5C_associated_SNPs_8006 0 0 2 UPF1 POSTAR2 ENCODE chr8:124220626-124220719
64251 chr8 124220700 124220700 1 + G A rs115042207 124220714 + 124220694 124220734 41 TGTCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCA TGTCAGAGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCA < 41bp 1 0.26234239762836 1 0.295573353767395 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220714 chr8:124220700 . . 0 7 hm5C_associated_SNPs_8007 0 0 2 UPF1 POSTAR2 ENCODE chr8:124220626-124220719
64251 chr8 124220700 124220700 1 + G A rs115042207 124220715 + 124220695 124220735 41 GTCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAG GTCAGAGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAG < 41bp 1 0.29800366590292 1 0.122844874858856 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220715 chr8:124220700 . . 0 6 hm5C_associated_SNPs_8008 0 0 2 UPF1 POSTAR2 ENCODE chr8:124220626-124220719
64251 chr8 124220700 124220700 1 + G A rs115042207 124220716 + 124220696 124220736 41 TCAGGGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAGT TCAGAGGCCAGGACTGGCCCCACTGCAGTGCCCAGGCCAGT < 41bp 1 0.336748654261849 1 0.181844174861908 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 UTR3 Human protein_coding chr8:124220716 chr8:124220700 . . 0 5 hm5C_associated_SNPs_8009 0 0 2 UPF1 POSTAR2 ENCODE chr8:124220626-124220719
64251 chr8 125551364 125551364 1 + A G rs34681068 125551367 + 125551347 125551387 41 TCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGT TCCGGCTGGCCCCGCTCGGTCACCCGCAGCAGGCGTGCAGT < 41bp 1 0.639652869893524 1 0.179532408714294 experiment 0.720694260212952 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551367 chr8:125551364 . . 0 18 hm5C_associated_SNPs_8010 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551364 125551364 1 + A G rs34681068 125551384 + 125551364 125551404 41 AGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC GGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC < 41bp 1 0.718207868505287 1 0.331740409135818 experiment 0.563584262989427 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551384 chr8:125551364 . . 0 1 hm5C_associated_SNPs_8011 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551365 125551365 1 + G A rs186855962 125551367 + 125551347 125551387 41 TCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGT TCCGGCTGGCCCCGCTCAATCACCCGCAGCAGGCGTGCAGT < 41bp 1 0.753598062354471 1 0.378390908241272 experiment 0.492803875291058 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551367 chr8:125551365 . . 0 19 hm5C_associated_SNPs_8012 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551365 125551365 1 + G A rs186855962 125551384 + 125551364 125551404 41 AGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC AATCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC < 41bp 1 0.676925522864606 1 0.32960906624794 experiment 0.646148954270787 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551384 chr8:125551365 . . 0 2 hm5C_associated_SNPs_8013 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551377 125551377 1 + A C rs371001929 125551367 + 125551347 125551387 41 TCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGT TCCGGCTGGCCCCGCTCAGTCACCCGCAGCCGGCGTGCAGT < 41bp 1 0.680451874689437 1 0.488457977771759 experiment 0.639096250621126 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551367 chr8:125551377 . . 0 31 hm5C_associated_SNPs_8014 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551377 125551377 1 + A C rs371001929 125551384 + 125551364 125551404 41 AGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC AGTCACCCGCAGCCGGCGTGCAGTTTCCCGGCTCTCCGCGC < 41bp 1 0.729458396259059 1 0.572023212909698 experiment 0.541083207481882 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551384 chr8:125551377 . . 0 14 hm5C_associated_SNPs_8015 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551385 125551385 1 + A G rs140365193 125551367 + 125551347 125551387 41 TCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGT TCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCGGT < 41bp 1 0.724499795005877 1 0.365175783634186 experiment 0.551000409988247 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551367 chr8:125551385 . . 0 39 hm5C_associated_SNPs_8016 1 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551385 125551385 1 + A G rs140365193 125551384 + 125551364 125551404 41 AGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC AGTCACCCGCAGCAGGCGTGCGGTTTCCCGGCTCTCCGCGC < 41bp 1 0.741662505836363 1 0.679103016853333 experiment 0.516674988327275 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551384 chr8:125551385 . . 0 22 hm5C_associated_SNPs_8017 1 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125551392 125551392 1 + C G rs79736226 125551384 + 125551364 125551404 41 AGTCACCCGCAGCAGGCGTGCAGTTTCCCGGCTCTCCGCGC AGTCACCCGCAGCAGGCGTGCAGTTTCCGGGCTCTCCGCGC < 41bp 1 0.720813005412827 1 0.204897820949554 experiment 0.558373989174347 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551384 chr8:125551392 . . 0 29 hm5C_associated_SNPs_8018 1 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr8 125562155 125562155 1 + C T rs377342524 125562146 + 125562126 125562166 41 CCATGTAGAAAGAGAGAGACCTCATCTTTCATGCTTGCAAG CCATGTAGAAAGAGAGAGACCTCATCTTTTATGCTTGCAAG < 41bp 1 0.252241929011251 1 0.498351275920868 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFB9 ENSG00000147684 UTR3 Human protein_coding chr8:125562146 chr8:125562155 . . 0 30 hm5C_associated_SNPs_8019 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:125562010-125562214
64251 chr8 126021414 126021414 1 + A T rs118130263 126021423 + 126021403 126021443 41 ATTTGTTTTAGAATGCACCACAGTTTAAAGCAAATCATGCT ATTTGTTTTAGTATGCACCACAGTTTAAAGCAAATCATGCT < 41bp 1 0.0661537425324856 1 0.295370638370514 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SQLE ENSG00000104549 CDS Human protein_coding chr8:126021423 chr8:126021414 nonsynonymous SNV 0.995 4 12 hm5C_associated_SNPs_8020 0 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr8:126021398-126021436
64251 chr8 126442674 126442674 1 + G A rs187451972 126442689 + 126442669 126442709 41 GCTCAGGATCCCGAGCGCCGCGAAAAAGTTCCCCCGGCTTT GCTCAAGATCCCGAGCGCCGCGAAAAAGTTCCCCCGGCTTT < 41bp 1 0.633255858163071 1 0.732907831668854 experiment 0.733488283673858 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIB1 ENSG00000173334 UTR5 Human protein_coding chr8:126442689 chr8:126442674 . . 0 6 hm5C_associated_SNPs_8021 0 0 2 DDX3X POSTAR2 ENCODE chr8:126442642-126442680
64251 chr8 128750757 128750757 1 + G C rs140182565 128750748 + 128750728 128750768 41 TACGTTGCGGTCACACCCTTCTCCCTTCGGGGAGACAACGA TACGTTGCGGTCACACCCTTCTCCCTTCGCGGAGACAACGA < 41bp 1 0.548345309866407 1 0.719464182853699 experiment 0.903309380267185 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYC ENSG00000136997 CDS Human protein_coding chr8:128750748 chr8:128750757 synonymous SNV . 0 30 hm5C_associated_SNPs_8022 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:128750705-128750766
64251 chr8 128753248 128753248 1 + G A rs35524866 128753253 + 128753233 128753273 41 ACAGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAA ACAGAAATGTCCTGAACAATCACCTATGAACTTGTTTCAAA < 41bp 1 0.733741358232347 1 0.302676141262054 experiment 0.532517283535306 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753253 chr8:128753248 . . 0 16 hm5C_associated_SNPs_8023 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 128753248 128753248 1 + G A rs35524866 128753255 + 128753235 128753275 41 AGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATG AGAAATGTCCTGAACAATCACCTATGAACTTGTTTCAAATG < 41bp 1 0.0839252879301013 1 0.0554847121238708 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753255 chr8:128753248 . . 0 14 hm5C_associated_SNPs_8024 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 128753248 128753248 1 + G A rs35524866 128753256 + 128753236 128753276 41 GAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATGC GAAATGTCCTGAACAATCACCTATGAACTTGTTTCAAATGC < 41bp 1 0.233142908008361 1 0.172530502080917 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753256 chr8:128753248 . . 0 13 hm5C_associated_SNPs_8025 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 128753254 128753254 1 + A G rs2070583 128753253 + 128753233 128753273 41 ACAGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAA ACAGAAATGTCCTGAGCAATCGCCTATGAACTTGTTTCAAA < 41bp 1 0.765212894668704 1 0.746206998825073 experiment 0.469574210662591 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753253 chr8:128753254 . . 0 22 hm5C_associated_SNPs_8026 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 128753254 128753254 1 + A G rs2070583 128753255 + 128753235 128753275 41 AGAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATG AGAAATGTCCTGAGCAATCGCCTATGAACTTGTTTCAAATG < 41bp 1 0.0897992795986863 1 0.144785404205322 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753255 chr8:128753254 . . 0 20 hm5C_associated_SNPs_8027 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 128753254 128753254 1 + A G rs2070583 128753256 + 128753236 128753276 41 GAAATGTCCTGAGCAATCACCTATGAACTTGTTTCAAATGC GAAATGTCCTGAGCAATCGCCTATGAACTTGTTTCAAATGC < 41bp 1 0.225392667499099 1 0.233053624629974 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYC ENSG00000136997 UTR3 Human protein_coding chr8:128753256 chr8:128753254 . . 0 19 hm5C_associated_SNPs_8028 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:128753218-128753257
64251 chr8 129108823 129108823 1 + C T rs11604 129108803 + 129108783 129108823 41 CCCAGATTCACAAGCCCCACCAAGAGGATCACCCCAGGAAC CCCAGATTCACAAGCCCCACCAAGAGGATCACCCCAGGAAT < 41bp 1 0.663478073423269 1 0.618604183197021 experiment 0.673043853153461 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PVT1 ENSG00000249859 ncRNA_exonic Human lincRNA chr8:129108803 chr8:129108823 . . 0 41 hm5C_associated_SNPs_8029 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:129108809-129108840
64251 chr8 144103730 144103730 1 + G C rs541280024 144103712 + 144103692 144103732 41 GCCTTTGGGGGTTGGGGTTTCTGCCACTTCCGGGTCTAGGC GCCTTTGGGGGTTGGGGTTTCTGCCACTTCCGGGTCTACGC < 41bp 1 0.686703008677623 1 0.225469648838043 experiment 0.626593982644753 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LY6E ENSG00000160932 UTR3 Human protein_coding chr8:144103712 chr8:144103730 . . 0 39 hm5C_associated_SNPs_8032 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:144103274-144103808
64251 chr8 144343338 144343338 1 + G A rs138162814 144343330 + 144343310 144343350 41 CCTGTTGGCTGTGGTGGGGTCCACCTGCGTTTCTGGGGAGC CCTGTTGGCTGTGGTGGGGTCCACCTGCATTTCTGGGGAGC < 41bp 1 0.107596398807378 1 0.164260387420654 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZFP41 ENSG00000181638 UTR3 Human protein_coding chr8:144343330 chr8:144343338 . . 0 29 hm5C_associated_SNPs_8033 0 0 1 SLTM POSTAR2 ENCODE chr8:144343329-144343366
64251 chr8 145065682 145065682 1 + G A rs201456230 145065698 + 145065678 145065718 41 AAGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTC AAGGAGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTC < 41bp 1 0.191467219764488 1 0.063848465681076 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065698 chr8:145065682 synonymous SNV . 0 5 hm5C_associated_SNPs_8036 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr8 145065682 145065682 1 + G A rs201456230 145065699 + 145065679 145065719 41 AGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTCC AGGAGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTCC < 41bp 1 0.165657520602746 1 0.0994962155818939 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065699 chr8:145065682 synonymous SNV . 0 4 hm5C_associated_SNPs_8037 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr8 145066886 145066886 1 + A G rs13277282 145066887 + 145066867 145066907 41 CAGTGGACACCCAGCTGCTACTGGGGAACAAGCAGCTGTCC CAGTGGACACCCAGCTGCTGCTGGGGAACAAGCAGCTGTCC < 41bp 1 0.756684399887606 1 0.79159688949585 experiment 0.486631200224787 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145066887 chr8:145066886 synonymous SNV . 0 20 hm5C_associated_SNPs_8038 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:145066880-145066900
64251 chr8 145137545 145137545 1 + G A rs538541613 145137536 + 145137516 145137556 41 TCTGGGACCGGAAGTGCGGGCGAGCGCGGGTCCCCGGGTCT TCTGGGACCGGAAGTGCGGGCGAGCGCGGATCCCCGGGTCT < 41bp 1 0.58717232722484 1 0.766103684902191 experiment 0.825655345550319 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 UTR5 Human protein_coding chr8:145137536 chr8:145137545 . . 0 30 hm5C_associated_SNPs_8039 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585675 chr8:145137526-145137561
64251 chr8 145139727 145139727 1 + C T rs4977165 145139712 + 145139692 145139732 41 TACTTGCTCCCCGGCCTCTCCCGCTTCGTCTCCATCGGCCT TACTTGCTCCCCGGCCTCTCCCGCTTCGTCTCCATTGGCCT < 41bp 1 0.229723345948867 1 0.118714451789856 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139712 chr8:145139727 synonymous SNV . 0 36 hm5C_associated_SNPs_8040 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:145139719-145139769
64251 chr8 145150832 145150832 1 + A G rs7820984 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCGGGGCTGGCCGTGGCTCTGCATTCGGCTG < 41bp 1 0.679085643476658 1 0.453360199928284 experiment 0.641828713046684 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150832 nonsynonymous SNV 0.084 0 23 hm5C_associated_SNPs_8041 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145150832-145150868
64251 chr8 145150833 145150833 1 + T C rs144257411 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCGGGGCTGGCCACGGCTCTGCATTCGGCTG < 41bp 1 0.708686338659139 1 0.467003226280212 experiment 0.582627322681723 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150833 nonsynonymous SNV 0.430 0 24 hm5C_associated_SNPs_8042 1 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145150832-145150868
64251 chr8 145169195 145169195 1 + G A rs115664571 145169204 + 145169184 145169224 41 TACCCGGAGGCGGGCACGATCGAGGGCCTGGCCTCGCTGTT TACCCGGAGGCAGGCACGATCGAGGGCCTGGCCTCGCTGTT < 41bp 1 0.770560838595023 1 0.979033946990967 experiment 0.458878322809954 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145169204 chr8:145169195 synonymous SNV . 0 12 hm5C_associated_SNPs_8055 0 0 5 PRPF8 POSTAR2 ENCODE chr8:145169078-145169228
64251 chr8 145169204 145169204 1 + C T rs528202886 145169220 + 145169200 145169240 41 CGATCGAGGGCCTGGCCTCGCTGTTGGTGGCCCTGCTGGAG CGATTGAGGGCCTGGCCTCGCTGTTGGTGGCCCTGCTGGAG < 41bp 1 0.349309983946535 1 0.413247495889664 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145169220 chr8:145169204 synonymous SNV . 0 5 hm5C_associated_SNPs_8056 0 0 5 PRPF8 POSTAR2 ENCODE chr8:145169078-145169228
64251 chr8 145582282 145582282 1 + C T rs187464121 145582262 + 145582242 145582282 41 TGCCGGGGGCGGGCCCGGAACCGCCACGGGTGAGTCGGGTC TGCCGGGGGCGGGCCCGGAACCGCCACGGGTGAGTCGGGTT < 41bp 1 0.246984108633858 1 0.45672932267189 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC52A2 ENSG00000185803 UTR5 Human protein_coding chr8:145582262 chr8:145582282 . . 0 41 hm5C_associated_SNPs_8058 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:145582280-145582302
64251 chr8 145583795 145583795 1 + C T rs147954962 145583775 + 145583755 145583795 41 TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTC TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTT < 41bp 1 0.300405006328744 1 0.0677160024642944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583775 chr8:145583795 synonymous SNV . 0 41 hm5C_associated_SNPs_8059 1 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145583774-145583800
64251 chr8 145660565 145660565 1 - G A rs149407728 145660553 - 145660533 145660573 41 CAGCGCCTCTGTCCCTGCAGCAGTGACACCCACTCTGTGGC CAGCGCCTTTGTCCCTGCAGCAGTGACACCCACTCTGTGGC < 41bp 1 0.214898824789873 1 0.714700222015381 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TONSL-AS1 ENSG00000160949 intronic Human protein_coding chr8:145660553 chr8:145660565 . . 0 9 hm5C_associated_SNPs_8060 0 0 2 EFTUD2 POSTAR2 ENCODE chr8:145660556-145660602
64251 chr8 145691802 145691802 1 + C T rs201514776 145691788 + 145691768 145691808 41 GCGCGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTAC GCGCGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTAC < 41bp 1 0.482662070833662 1 0.184433162212372 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691788 chr8:145691802 . . 0 35 hm5C_associated_SNPs_8061 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145691802 145691802 1 + C T rs201514776 145691789 + 145691769 145691809 41 CGCGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTACG CGCGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTACG < 41bp 1 0.339267232796768 1 0.425486594438553 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691789 chr8:145691802 . . 0 34 hm5C_associated_SNPs_8062 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145691802 145691802 1 + C T rs201514776 145691791 + 145691771 145691811 41 CGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTACGCC CGAAGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTACGCC < 41bp 1 0.398465215797559 1 0.393499463796616 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691791 chr8:145691802 . . 0 32 hm5C_associated_SNPs_8063 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145691802 145691802 1 + C T rs201514776 145691792 + 145691772 145691812 41 GAAGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTACGCCT GAAGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTACGCCT < 41bp 1 0.330710955386882 1 0.563832461833954 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691792 chr8:145691802 . . 0 31 hm5C_associated_SNPs_8064 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145691802 145691802 1 + C T rs201514776 145691793 + 145691773 145691813 41 AAGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTACGCCTT AAGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTACGCCTT < 41bp 1 0.508222874117319 1 0.253276288509369 experiment 0.983554251765362 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691793 chr8:145691802 . . 0 30 hm5C_associated_SNPs_8065 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145691802 145691802 1 + C T rs201514776 145691794 + 145691774 145691814 41 AGCGGGGCCCTCTGCCGCCCCGCGCTCCCATGTACGCCTTT AGCGGGGCCCTCTGCCGCCCCGCGCTCCTATGTACGCCTTT < 41bp 1 0.4790971551485 1 0.420938014984131 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIFC2 ENSG00000167702 UTR5 Human protein_coding chr8:145691794 chr8:145691802 . . 0 29 hm5C_associated_SNPs_8066 0 0 2 CSTF2T POSTAR2 ENCODE chr8:145691699-145691808
64251 chr8 145697768 145697768 1 + C A rs61739558 145697780 + 145697760 145697800 41 GGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG GGGCCTCCAGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG < 41bp 1 0.7133543598475 1 0.60174298286438 experiment 0.573291280305 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145697780 chr8:145697768 synonymous SNV . 0 9 hm5C_associated_SNPs_8067 0 0 4 LSM11 POSTAR2 ENCODE chr8:145697742-145697786
64251 chr8 145727139 145727139 1 + G A rs138353402 145727126 + 145727106 145727146 41 GCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAGACAGCTG GCGACCCCCACCTGAGGGGCCCGAGAGCCCTGAAACAGCTG < 41bp 1 0.283059345916074 1 0.47441229224205 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727126 chr8:145727139 synonymous SNV . 0 34 hm5C_associated_SNPs_8069 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145727137-145727164
64251 chr8 145727407 145727407 1 + T G rs192904904 145727417 + 145727397 145727437 41 TACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGG TACAGGACACGGGCCCCTCTCAGGTCAGAAGACATGCCTGG < 41bp 1 0.783076736672375 1 0.931356191635132 experiment 0.433846526655249 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R16A ENSG00000255182 ncRNA_intronic Human processed_transcript chr8:145727417 chr8:145727407 . . 0 11 hm5C_associated_SNPs_8070 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:145727387-145727419
64251 chr8 145735872 145735872 1 + C A rs180675502 145735855 + 145735835 145735875 41 GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGAACTT < 41bp 1 0.227428447126992 1 0.063158243894577 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735855 chr8:145735872 nonsynonymous SNV 0.024 0 38 hm5C_associated_SNPs_8071 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145735838-145735876
64251 chr8 145735872 145735872 1 + C A rs180675502 145735858 + 145735838 145735878 41 GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGAACTTGCT < 41bp 1 0.158619093388642 1 0.208446890115738 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735858 chr8:145735872 nonsynonymous SNV 0.024 0 35 hm5C_associated_SNPs_8072 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145735838-145735876
64251 chr8 145736254 145736254 1 + C T rs73377627 145736271 + 145736251 145736291 41 ATGCGCTGCAGCCAGCTGGCCCCCAGGGCCCTGCAGGTGAG ATGTGCTGCAGCCAGCTGGCCCCCAGGGCCCTGCAGGTGAG < 41bp 1 0.392055782712186 1 0.195359110832214 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736271 chr8:145736254 nonsynonymous SNV 0.993 1 4 hm5C_associated_SNPs_8073 0 0 3 PPIG POSTAR2 ENCODE chr8:145736225-145736286
64251 chr8 145736460 145736460 1 + G C rs570033509 145736472 + 145736452 145736492 41 GATGGGTTGGGGCCACATCCCTGCTTCTTGCTCCTGCTCAT GATGGGTTCGGGCCACATCCCTGCTTCTTGCTCCTGCTCAT < 41bp 1 0.628717228340515 1 0.10076117515564 experiment 0.74256554331897 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736472 chr8:145736460 nonsynonymous SNV 0.001 1 9 hm5C_associated_SNPs_8074 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:145736460-145736480
64251 chr8 146277852 146277852 1 + C G rs201179746 146277849 + 146277829 146277869 41 TCGGCGTCGGACTCTGCGCCCCGCGTAGTTCCGGTGGCGAC TCGGCGTCGGACTCTGCGCCCCGGGTAGTTCCGGTGGCGAC < 41bp 1 0.759008188554449 1 0.775508642196655 experiment 0.481983622891103 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C8orf33 ENSG00000182307 UTR5 Human protein_coding chr8:146277849 chr8:146277852 . . 0 24 hm5C_associated_SNPs_8080 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:146277840-146277860
64251 chr8 146277852 146277852 1 + C G rs201179746 146277850 + 146277830 146277870 41 CGGCGTCGGACTCTGCGCCCCGCGTAGTTCCGGTGGCGACT CGGCGTCGGACTCTGCGCCCCGGGTAGTTCCGGTGGCGACT < 41bp 1 0.660143759451333 1 0.764660596847534 experiment 0.679712481097333 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C8orf33 ENSG00000182307 UTR5 Human protein_coding chr8:146277850 chr8:146277852 . . 0 23 hm5C_associated_SNPs_8081 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:146277840-146277860
64251 chr9 5747307 5747307 1 + C G rs190154814 5747314 + 5747294 5747334 41 TCATTTAGAGTAACCAAGAGCAGGTGTTGCTTCAGGGTGAG TCATTTAGAGTAAGCAAGAGCAGGTGTTGCTTCAGGGTGAG < 41bp 1 0.658651430600658 1 0.682490825653076 experiment 0.682697138798684 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RIC1 ENSG00000107036 CDS Human protein_coding chr9:5747314 chr9:5747307 nonsynonymous SNV 0.999 3 14 hm5C_associated_SNPs_8085 0 0 4 DDX24 POSTAR2 ENCODE chr9:5747301-5747347
64251 chr9 6413381 6413381 1 + G C rs562598186 6413397 + 6413377 6413417 41 GCCCGCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGC GCCCCCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGC < 41bp 1 0.588573184220031 1 0.230863600969315 experiment 0.822853631559938 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413397 chr9:6413381 . . 0 5 hm5C_associated_SNPs_8086 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr9 6413381 6413381 1 + G C rs562598186 6413398 + 6413378 6413418 41 CCCGCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGCG CCCCCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGCG < 41bp 1 0.72609743615765 1 0.583268046379089 experiment 0.5478051276847 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413398 chr9:6413381 . . 0 4 hm5C_associated_SNPs_8087 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr9 6413403 6413403 1 + C T rs548460330 6413397 + 6413377 6413417 41 GCCCGCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGC GCCCGCCTGCCGCTGAGGGCCCGAGCTGCAGGGAAAGCGGC < 41bp 1 0.669342364479014 1 0.383988738059998 experiment 0.661315271041972 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413397 chr9:6413403 . . 0 27 hm5C_associated_SNPs_8088 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr9 6413403 6413403 1 + C T rs548460330 6413398 + 6413378 6413418 41 CCCGCCTGCCGCTGAGGGCCCGAGCCGCAGGGAAAGCGGCG CCCGCCTGCCGCTGAGGGCCCGAGCTGCAGGGAAAGCGGCG < 41bp 1 0.761737948369447 1 0.479898065328598 experiment 0.476524103261105 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413398 chr9:6413403 . . 0 26 hm5C_associated_SNPs_8089 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr9 9442103 9442103 1 + G A rs181292635 9442088 + 9442068 9442108 41 CGGTGGCGCGTGCCTGTGGTCCCAGCTACTCGGGAGGCTGA CGGTGGCGCGTGCCTGTGGTCCCAGCTACTCGGGAAGCTGA < 41bp 1 0.393836363210663 1 0.362542659044266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPRD ENSG00000265735 ncRNA_exonic Human misc_RNA chr9:9442088 chr9:9442103 . . 0 36 hm5C_associated_SNPs_8096 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:9442084-9442135
64251 chr9 9442103 9442103 1 + G A rs181292635 9442089 + 9442069 9442109 41 GGTGGCGCGTGCCTGTGGTCCCAGCTACTCGGGAGGCTGAG GGTGGCGCGTGCCTGTGGTCCCAGCTACTCGGGAAGCTGAG < 41bp 1 0.281264576040174 1 0.639280200004578 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPRD ENSG00000265735 ncRNA_exonic Human misc_RNA chr9:9442089 chr9:9442103 . . 0 35 hm5C_associated_SNPs_8097 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:9442084-9442135
64251 chr9 9442103 9442103 1 + G A rs181292635 9442093 + 9442073 9442113 41 GCGCGTGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGCTG GCGCGTGCCTGTGGTCCCAGCTACTCGGGAAGCTGAGGCTG < 41bp 1 0.469200510117129 1 0.403967410326004 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPRD ENSG00000265735 ncRNA_exonic Human misc_RNA chr9:9442093 chr9:9442103 . . 0 31 hm5C_associated_SNPs_8098 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:9442084-9442135
64251 chr9 19336781 19336781 1 + C T rs570387726 19336770 + 19336750 19336790 41 ATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGAT ATGATGCTAACAATGGGGAGCACACAGTCTTTGTCAGAGAT < 41bp 1 0.0535975970838051 1 0.276986479759216 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336770 chr9:19336781 synonymous SNV . 0 32 hm5C_associated_SNPs_8109 0 0 1 QKI POSTAR2 ENCODE chr9:19336751-19336813
64251 chr9 20786994 20786994 1 + G A rs10511686 20787003 + 20786983 20787023 41 TGAGAGAAAACGCTTGATTGCATCCTTGCCCTGGGACTGTG TGAGAGAAAACACTTGATTGCATCCTTGCCCTGGGACTGTG < 41bp 1 0.0450061963906952 1 0.0414016544818878 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA30B ENSG00000202189 ncRNA_exonic Human snoRNA chr9:20787003 chr9:20786994 . . 0 12 hm5C_associated_SNPs_8111 0 0 2 DKC1 POSTAR2 ENCODE chr9:20786937-20787016
64251 chr9 20786994 20786994 1 + G A rs10511686 20787006 + 20786986 20787026 41 GAGAAAACGCTTGATTGCATCCTTGCCCTGGGACTGTGCCA GAGAAAACACTTGATTGCATCCTTGCCCTGGGACTGTGCCA < 41bp 1 0.0154354372659121 1 0.0649788379669189 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA30B ENSG00000202189 ncRNA_exonic Human snoRNA chr9:20787006 chr9:20786994 . . 0 9 hm5C_associated_SNPs_8112 0 0 2 DKC1 POSTAR2 ENCODE chr9:20786937-20787016
64251 chr9 20786994 20786994 1 + G A rs10511686 20787011 + 20786991 20787031 41 AACGCTTGATTGCATCCTTGCCCTGGGACTGTGCCAGTGGC AACACTTGATTGCATCCTTGCCCTGGGACTGTGCCAGTGGC < 41bp 1 0.0358679551753603 1 0.0714086592197418 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA30B ENSG00000202189 ncRNA_exonic Human snoRNA chr9:20787011 chr9:20786994 . . 0 4 hm5C_associated_SNPs_8113 0 0 2 DKC1 POSTAR2 ENCODE chr9:20786937-20787016
64251 chr9 20786994 20786994 1 + G A rs10511686 20787012 + 20786992 20787032 41 ACGCTTGATTGCATCCTTGCCCTGGGACTGTGCCAGTGGCA ACACTTGATTGCATCCTTGCCCTGGGACTGTGCCAGTGGCA < 41bp 1 0.0749776238824219 1 0.283380150794983 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA30B ENSG00000202189 ncRNA_exonic Human snoRNA chr9:20787012 chr9:20786994 . . 0 3 hm5C_associated_SNPs_8114 0 0 2 DKC1 POSTAR2 ENCODE chr9:20786937-20787016
64251 chr9 20990240 20990240 1 + C G rs76872931 20990239 + 20990219 20990259 41 CATGGCATCAGGAGAATGGCCCGGCTGGGCCAGTACCAAGC CATGGCATCAGGAGAATGGCCGGGCTGGGCCAGTACCAAGC < 41bp 1 0.583314373737855 1 0.772090494632721 experiment 0.83337125252429 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990239 chr9:20990240 nonsynonymous SNV 0.196 1 22 hm5C_associated_SNPs_8116 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990240 20990240 1 + C G rs76872931 20990248 + 20990228 20990268 41 AGGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGC AGGAGAATGGCCGGGCTGGGCCAGTACCAAGCTTCCTTGGC < 41bp 1 0.254809441003016 1 0.0964495539665222 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990248 chr9:20990240 nonsynonymous SNV 0.196 1 13 hm5C_associated_SNPs_8117 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990240 20990240 1 + C G rs76872931 20990249 + 20990229 20990269 41 GGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCA GGAGAATGGCCGGGCTGGGCCAGTACCAAGCTTCCTTGGCA < 41bp 1 0.479735254172469 1 0.209919482469559 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990249 chr9:20990240 nonsynonymous SNV 0.196 1 12 hm5C_associated_SNPs_8118 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 21859379 21859379 1 + T G rs62556500 21859391 + 21859371 21859411 41 ACCATACCTCAGATAGGGTCCACAGAATGGTCAGAAACCCT ACCATACCGCAGATAGGGTCCACAGAATGGTCAGAAACCCT < 41bp 1 0.311530670450125 1 0.251135289669037 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859391 chr9:21859379 synonymous SNV . 0 9 hm5C_associated_SNPs_8119 1 0 2 PPIG POSTAR2 ENCODE chr9:21859370-21859449
64251 chr9 33025324 33025324 1 + C G rs77871808 33025343 + 33025323 33025363 41 GCTGCGCACAGCTCGGCGCTCCTTCCCGCTCCCTCACACAC GGTGCGCACAGCTCGGCGCTCCTTCCCGCTCCCTCACACAC < 41bp 1 0.166408876652063 1 0.0929149389266968 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJA1 ENSG00000086061 UTR5 Human protein_coding chr9:33025343 chr9:33025324 . . 0 2 hm5C_associated_SNPs_8122 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:33025280-33025340
64251 chr9 33313652 33313652 1 + G A rs557655235 33313662 + 33313642 33313682 41 GTCTTTACAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCA GTCTTTACAGACACACAGTTCGCTGTGGTCAGGCTGTCTCA < 41bp 1 0.393441254916752 1 0.568991184234619 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33313662 chr9:33313652 synonymous SNV . 0 11 hm5C_associated_SNPs_8125 0 0 2 PPIG POSTAR2 ENCODE chr9:33313650-33313696
64251 chr9 33348074 33348074 1 + C T rs558595523 33348088 + 33348068 33348108 41 TCCGAGCACGGTGGCTCATGCCTATAATCCCAGCACTTTGG TCCGAGTACGGTGGCTCATGCCTATAATCCCAGCACTTTGG < 41bp 1 0.0268201311630559 1 0.0305065810680389 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFX1 ENSG00000086102 UTR3 Human protein_coding chr9:33348088 chr9:33348074 . . 0 7 hm5C_associated_SNPs_8126 0 0 2 LIN28B POSTAR2 ENCODE chr9:33348039-33348106
64251 chr9 33366682 33366682 1 + G A rs146508853 33366677 + 33366657 33366697 41 CCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTT CCTCCCATGAACAGAGACCACCGCCAGATCATCCATGACTT < 41bp 1 0.202513553413176 1 0.118157088756561 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33366677 chr9:33366682 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_8127 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33366662-33366686
64251 chr9 33624525 33624525 1 + C T rs146208858 33624530 + 33624510 33624550 41 AAAAGGAACTTGCATCAGCACTGAAGTCAGCCTTATCTGGC AAAAGGAACTTGCATTAGCACTGAAGTCAGCCTTATCTGGC < 41bp 1 0.75731892488898 1 0.10501691699028 experiment 0.485362150222041 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANXA2P2 ENSG00000231991 ncRNA_exonic Human processed_pseudogene chr9:33624530 chr9:33624525 . . 0 16 hm5C_associated_SNPs_8129 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:33624497-33624533
64251 chr9 34338718 34338718 1 + G A rs141762241 34338713 + 34338693 34338733 41 ACATCTCTCTTGTTTCAGTGCGTTTGCTTCTGAGGATCTCC ACATCTCTCTTGTTTCAGTGCGTTTACTTCTGAGGATCTCC < 41bp 1 0.0541532795915031 1 0.0850545465946198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUDT2 ENSG00000164978 UTR5 Human protein_coding chr9:34338713 chr9:34338718 . . 0 26 hm5C_associated_SNPs_8133 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr9:34338700-34338720
64251 chr9 35733402 35733402 1 + A G rs11538707 35733405 + 35733385 35733425 41 TACCCTAGGAGATTGCTAGGCTAGTACTGACAGATGAGGAG TACCCTAGGAGATTGCTGGGCTAGTACTGACAGATGAGGAG < 41bp 1 0.247119127685576 1 0.168048739433289 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733405 chr9:35733402 nonsynonymous SNV 0.452 1 18 hm5C_associated_SNPs_8136 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:35733392-35733415
64251 chr9 35733402 35733402 1 + A G rs11538707 35733411 + 35733391 35733431 41 AGGAGATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGT AGGAGATTGCTGGGCTAGTACTGACAGATGAGGAGAAGAGT < 41bp 1 0.212607527667576 1 0.388824135065079 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733411 chr9:35733402 nonsynonymous SNV 0.452 1 12 hm5C_associated_SNPs_8137 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:35733392-35733415
64251 chr9 35733402 35733402 1 + A G rs11538707 35733415 + 35733395 35733435 41 GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTAT GATTGCTGGGCTAGTACTGACAGATGAGGAGAAGAGTCTAT < 41bp 1 0.402289396457802 1 0.336936712265015 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733415 chr9:35733402 nonsynonymous SNV 0.452 1 8 hm5C_associated_SNPs_8138 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:35733392-35733415
64251 chr9 35733434 35733434 1 + A G rs149239671 35733415 + 35733395 35733435 41 GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTAT GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTGT < 41bp 1 0.346388535130099 1 0.193978905677795 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733415 chr9:35733434 synonymous SNV . 0 40 hm5C_associated_SNPs_8139 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr9:35733426-35733452
64251 chr9 37422700 37422700 1 + C A rs149749351 37422705 + 37422685 37422725 41 GCCCAGCTACATTCCCGGGCCAGCTTCTGTACTGCCAGGTC GCCCAGCTACATTCCAGGGCCAGCTTCTGTACTGCCAGGTC < 41bp 1 0.430996386970687 1 0.391585260629654 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GRHPR ENSG00000137106 UTR5 Human protein_coding chr9:37422705 chr9:37422700 . . 0 16 hm5C_associated_SNPs_8149 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:37422680-37422700
64251 chr9 37428796 37428796 1 + T C rs309462 37428787 + 37428767 37428807 41 AACTCACCAGGTGATAAAAGCAAGTTGCCTAAGGGTCAGGG AACTCACCAGGTGATAAAAGCAAGTTGCCCAAGGGTCAGGG < 41bp 1 0.314622584768924 1 0.49571493268013 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 intronic Human protein_coding chr9:37428787 chr9:37428796 . . 0 30 hm5C_associated_SNPs_8150 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:37428743-37428796
64251 chr9 37428908 37428908 1 + A G rs370451439 37428890 + 37428870 37428910 41 GAGTGGTTACCGTGAGAGAGCCCATTCCCCCGACACCTACT GAGTGGTTACCGTGAGAGAGCCCATTCCCCCGACACCTGCT < 41bp 1 0.096795476636496 1 0.0861759185791016 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 intronic Human protein_coding chr9:37428890 chr9:37428908 . . 0 39 hm5C_associated_SNPs_8151 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:37428883-37428913
64251 chr9 38397451 38397451 1 + G A rs141706677 38397467 + 38397447 38397487 41 CAAGGCTGTTCTATTTAAATCAGAGATGGGGACCAGGCTCA CAAGACTGTTCTATTTAAATCAGAGATGGGGACCAGGCTCA < 41bp 1 0.719401457291669 1 0.472343504428864 experiment 0.561197085416661 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALDH1B1 ENSG00000137124 UTR3 Human protein_coding chr9:38397467 chr9:38397451 . . 0 5 hm5C_associated_SNPs_8155 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:38397439-38397468
64251 chr9 71650752 71650752 1 + A G rs2481598 71650749 + 71650729 71650769 41 GGCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCT GGCCTCCTGGCGTCACCCAGCCCGGCCCAGGCCCAGACCCT < 41bp 1 0.662945895449392 1 0.304737359285355 experiment 0.674108209101216 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650749 chr9:71650752 synonymous SNV . 0 24 hm5C_associated_SNPs_8179 2 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71650752 71650752 1 + A G rs2481598 71650750 + 71650730 71650770 41 GCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCTC GCCTCCTGGCGTCACCCAGCCCGGCCCAGGCCCAGACCCTC < 41bp 1 0.555280945655135 1 0.295556962490082 experiment 0.88943810868973 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650750 chr9:71650752 synonymous SNV . 0 23 hm5C_associated_SNPs_8180 2 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71650752 71650752 1 + A G rs2481598 71650751 + 71650731 71650771 41 CCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCTCA CCTCCTGGCGTCACCCAGCCCGGCCCAGGCCCAGACCCTCA < 41bp 1 0.723402720834203 1 0.183262914419174 experiment 0.553194558331593 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650751 chr9:71650752 synonymous SNV . 0 22 hm5C_associated_SNPs_8181 2 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71650766 71650766 1 + C A rs572324212 71650749 + 71650729 71650769 41 GGCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCT GGCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGAACCT < 41bp 1 0.385506145018307 1 0.0978075861930847 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650749 chr9:71650766 nonsynonymous SNV 0.001 2 38 hm5C_associated_SNPs_8182 0 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71650766 71650766 1 + C A rs572324212 71650750 + 71650730 71650770 41 GCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCTC GCCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGAACCTC < 41bp 1 0.358412315813511 1 0.20536607503891 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650750 chr9:71650766 nonsynonymous SNV 0.001 2 37 hm5C_associated_SNPs_8183 0 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71650766 71650766 1 + C A rs572324212 71650751 + 71650731 71650771 41 CCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGACCCTCA CCTCCTGGCGTCACCCAGCCCAGCCCAGGCCCAGAACCTCA < 41bp 1 0.630475964210394 1 0.0533720552921295 experiment 0.739048071579212 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71650751 chr9:71650766 nonsynonymous SNV 0.001 2 36 hm5C_associated_SNPs_8184 0 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr9 71661335 71661335 1 + A G rs146284289 71661354 + 71661334 71661374 41 AATGTCAAAAAGCAGAGTGTCTATTTGATGAATTTGAGGAA AGTGTCAAAAAGCAGAGTGTCTATTTGATGAATTTGAGGAA < 41bp 1 0.218527530587677 1 0.0516341328620911 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71661354 chr9:71661335 nonsynonymous SNV 0.744 1 2 hm5C_associated_SNPs_8185 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:71661306-71661390
64251 chr9 71661361 71661361 1 + A G rs59907886 71661354 + 71661334 71661374 41 AATGTCAAAAAGCAGAGTGTCTATTTGATGAATTTGAGGAA AATGTCAAAAAGCAGAGTGTCTATTTGGTGAATTTGAGGAA < 41bp 1 0.21956388169216 1 0.0685542523860931 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FXN ENSG00000165060 CDS Human protein_coding chr9:71661354 chr9:71661361 nonsynonymous SNV 0.005 0 28 hm5C_associated_SNPs_8186 1 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:71661306-71661390
64251 chr9 72913041 72913041 1 + A C rs116117325 72913039 + 72913019 72913059 41 GCCCCAGATTGATGCCATTACAAATGATCTGAGACGGATTC GCCCCAGATTGATGCCATTACACATGATCTGAGACGGATTC < 41bp 1 0.569272765158971 1 0.152897298336029 experiment 0.861454469682059 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC5 ENSG00000198887 CDS Human protein_coding chr9:72913039 chr9:72913041 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_8189 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:72913039-72913074
64251 chr9 80912092 80912092 1 + C G rs561420026 80912087 + 80912067 80912107 41 ACGCCAGCCGTTCACGCGTTCGGTCCTCCTTGGCTGACTCA ACGCCAGCCGTTCACGCGTTCGGTCGTCCTTGGCTGACTCA < 41bp 1 0.577437839289622 1 0.365625590085983 experiment 0.845124321420756 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSAT1 ENSG00000135069 UTR5 Human protein_coding chr9:80912087 chr9:80912092 . . 0 26 hm5C_associated_SNPs_8194 0 0 31 DDX3X POSTAR2 GSE70804,GSM1819210 chr9:80912040-80912100
64251 chr9 80942981 80942981 1 + C A rs148080212 80942983 + 80942963 80943003 41 TCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAT TCAGTTGTCCAGTGGAGCACCAAAATAGAAGCAAGATGAAT < 41bp 1 0.430619291529052 1 0.379784643650055 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80942983 chr9:80942981 nonsynonymous SNV 0.485 0 19 hm5C_associated_SNPs_8195 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80942930-80943008
64251 chr9 88556592 88556592 1 + G T rs374513708 88556610 + 88556590 88556630 41 AGGTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGG AGTTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGG < 41bp 1 0.284534290015085 1 0.298274785280228 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556610 chr9:88556592 . . 0 3 hm5C_associated_SNPs_8196 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556592 88556592 1 + G T rs374513708 88556611 + 88556591 88556631 41 GGTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGT GTTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGT < 41bp 1 0.519952454111933 1 0.277519226074219 experiment 0.960095091776134 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556611 chr9:88556592 . . 0 2 hm5C_associated_SNPs_8197 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556601 88556601 1 + G C rs570919246 88556610 + 88556590 88556630 41 AGGTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGG AGGTTCTGCCTCGGTCCGGGCCGGCTCTGGCCCGGGAGAGG < 41bp 1 0.230020813148581 1 0.272160351276398 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556610 chr9:88556601 . . 0 12 hm5C_associated_SNPs_8198 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556601 88556601 1 + G C rs570919246 88556611 + 88556591 88556631 41 GGTTCTGCCTGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGT GGTTCTGCCTCGGTCCGGGCCGGCTCTGGCCCGGGAGAGGT < 41bp 1 0.495117726486534 1 0.391763299703598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556611 chr9:88556601 . . 0 11 hm5C_associated_SNPs_8199 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556601 88556601 1 + G C rs570919246 88556620 + 88556600 88556640 41 TGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAG TCGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAG < 41bp 1 0.796021735752921 1 0.876556158065796 experiment 0.407956528494158 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556620 chr9:88556601 . . 0 2 hm5C_associated_SNPs_8200 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556601 88556601 1 + G C rs570919246 88556621 + 88556601 88556641 41 GGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAGC CGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAGC < 41bp 1 0.62895270845429 1 0.907027125358582 experiment 0.74209458309142 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556621 chr9:88556601 . . 0 1 hm5C_associated_SNPs_8201 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:88556587-88556611
64251 chr9 88556636 88556636 1 + G C rs180996664 88556620 + 88556600 88556640 41 TGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAG TGGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCACCGAG < 41bp 1 0.789040948063082 1 0.908323287963867 experiment 0.421918103873835 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556620 chr9:88556636 . . 0 37 hm5C_associated_SNPs_8202 0 0 1 DDX3X POSTAR2 ENCODE chr9:88556583-88556644
64251 chr9 88556636 88556636 1 + G C rs180996664 88556621 + 88556601 88556641 41 GGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCAGCGAGC GGGTCCGGGCCGGCTCTGGCCCGGGAGAGGTCCCACCGAGC < 41bp 1 0.698184246361767 1 0.891559600830078 experiment 0.603631507276466 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556621 chr9:88556636 . . 0 36 hm5C_associated_SNPs_8203 0 0 1 DDX3X POSTAR2 ENCODE chr9:88556583-88556644
64251 chr9 88556636 88556636 1 + G C rs180996664 88556648 + 88556628 88556668 41 AGGTCCCAGCGAGCTCTGGCCAGATGAAGGGCTACCTTGAT AGGTCCCACCGAGCTCTGGCCAGATGAAGGGCTACCTTGAT < 41bp 1 0.392064549866601 1 0.831072688102722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA35 ENSG00000135040 UTR5 Human protein_coding chr9:88556648 chr9:88556636 . . 0 9 hm5C_associated_SNPs_8204 0 0 1 DDX3X POSTAR2 ENCODE chr9:88556583-88556644
64251 chr9 91033832 91033832 1 + A G rs141435006 91033844 + 91033824 91033864 41 TGCATGACACATAGCGAGTGCTCAGTGAACAGTCATTTTTC TGCATGACGCATAGCGAGTGCTCAGTGAACAGTCATTTTTC < 41bp 1 0.331967081146343 1 0.694426774978638 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPIN1 ENSG00000106723 UTR5 Human protein_coding chr9:91033844 chr9:91033832 . . 0 9 hm5C_associated_SNPs_8206 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:91033814-91033853
64251 chr9 91083288 91083288 1 + G A rs61999324 91083287 + 91083267 91083307 41 TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGATG TTTTTTTTTTTAATCCCCAGCAACATCTCGAATCAGCGATG < 41bp 1 0.29388644822274 1 0.407465875148773 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083287 chr9:91083288 synonymous SNV . 0 22 hm5C_associated_SNPs_8207 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr9:91083277-91083298
64251 chr9 91933470 91933470 1 + G A rs193197080 91933469 + 91933449 91933489 41 CGCTGCTGGCCTCCGTGACGCGGCCTCCTCCGCGCCTCGCG CGCTGCTGGCCTCCGTGACGCAGCCTCCTCCGCGCCTCGCG < 41bp 1 0.700587394350175 1 0.787618398666382 experiment 0.598825211299651 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933469 chr9:91933470 . . 0 22 hm5C_associated_SNPs_8212 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91933470 91933470 1 + G A rs193197080 91933472 + 91933452 91933492 41 TGCTGGCCTCCGTGACGCGGCCTCCTCCGCGCCTCGCGGCA TGCTGGCCTCCGTGACGCAGCCTCCTCCGCGCCTCGCGGCA < 41bp 1 0.12410166408207 1 0.071450799703598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933472 chr9:91933470 . . 0 19 hm5C_associated_SNPs_8213 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91933470 91933470 1 + G A rs193197080 91933475 + 91933455 91933495 41 TGGCCTCCGTGACGCGGCCTCCTCCGCGCCTCGCGGCATGG TGGCCTCCGTGACGCAGCCTCCTCCGCGCCTCGCGGCATGG < 41bp 1 0.167968184065459 1 0.0798941850662231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933475 chr9:91933470 . . 0 16 hm5C_associated_SNPs_8214 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91933470 91933470 1 + G A rs193197080 91933476 + 91933456 91933496 41 GGCCTCCGTGACGCGGCCTCCTCCGCGCCTCGCGGCATGGC GGCCTCCGTGACGCAGCCTCCTCCGCGCCTCGCGGCATGGC < 41bp 1 0.749654467463318 1 0.304888606071472 experiment 0.500691065073365 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933476 chr9:91933470 . . 0 15 hm5C_associated_SNPs_8215 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91933470 91933470 1 + G A rs193197080 91933478 + 91933458 91933498 41 CCTCCGTGACGCGGCCTCCTCCGCGCCTCGCGGCATGGCGT CCTCCGTGACGCAGCCTCCTCCGCGCCTCGCGGCATGGCGT < 41bp 1 0.718080247203275 1 0.302297413349152 experiment 0.56383950559345 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933478 chr9:91933470 . . 0 13 hm5C_associated_SNPs_8216 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91933470 91933470 1 + G A rs193197080 91933479 + 91933459 91933499 41 CTCCGTGACGCGGCCTCCTCCGCGCCTCGCGGCATGGCGTC CTCCGTGACGCAGCCTCCTCCGCGCCTCGCGGCATGGCGTC < 41bp 1 0.790900984764226 1 0.770947813987732 experiment 0.418198030471548 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SECISBP2 ENSG00000187742 UTR5 Human protein_coding chr9:91933479 chr9:91933470 . . 0 12 hm5C_associated_SNPs_8217 0 0 2 DDX3X POSTAR2 ENCODE chr9:91933427-91933528
64251 chr9 91973860 91973860 1 + A T rs147264264 91973841 + 91973821 91973861 41 TGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGAT TGACAATGTAATTTGTGTAACTGTTGAATCTGGAAATTGTT < 41bp 1 0.168115190122361 1 0.0533234179019928 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91973841 chr9:91973860 . . 0 40 hm5C_associated_SNPs_8218 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91973800-91973870
64251 chr9 95869981 95869981 1 + G A rs74414352 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCGCCTGGTACAGGACACGCCTTTCCTGACAGGCCATGGGC < 41bp 1 0.045553154616748 1 0.0390989184379578 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869981 synonymous SNV . 0 10 hm5C_associated_SNPs_8219 0 0 2 DDX3X POSTAR2 ENCODE chr9:95869959-95869999
64251 chr9 95870005 95870005 1 + C A rs34200537 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGACATGGGC < 41bp 1 0.0479532234239774 1 0.0639085471630096 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95870005 synonymous SNV . 0 34 hm5C_associated_SNPs_8220 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr9:95869999-95870037
64251 chr9 97686330 97686330 1 + G A rs10993400 97686328 + 97686308 97686348 41 GGGAACCATCTCTGTGGGACCCGCCTCTGCCATGAAATTGC GGGAACCATCTCTGTGGGACCCACCTCTGCCATGAAATTGC < 41bp 1 0.0569147858453193 1 0.0612650513648987 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97686328 chr9:97686330 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_8222 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:97686315-97686348
64251 chr9 100079355 100079355 1 + C T rs970857 100079373 + 100079353 100079393 41 AACTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT AATTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT < 41bp 1 0.711418142271756 1 0.598756432533264 experiment 0.577163715456488 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100079373 chr9:100079355 synonymous SNV . 0 3 hm5C_associated_SNPs_8225 0 0 2 UCHL5 POSTAR2 ENCODE chr9:100079345-100079394
64251 chr9 100079386 100079386 1 + G A rs41281928 100079373 + 100079353 100079393 41 AACTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT AACTATGCCCTGCTGGGCAACCGGAAGGCTCTCACCCAGCT < 41bp 1 0.645468540744504 1 0.635444283485413 experiment 0.709062918510993 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100079373 chr9:100079386 nonsynonymous SNV 0.981 0 34 hm5C_associated_SNPs_8226 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:100079380-100079400
64251 chr9 100174444 100174444 1 + G C rs373486700 100174437 + 100174417 100174457 41 GGGAAACCGAAAGTGGGCGGCGGCCGCGGCGGGGCCCCTGG GGGAAACCGAAAGTGGGCGGCGGCCGCCGCGGGGCCCCTGG < 41bp 1 0.767780022047038 1 0.850878238677979 experiment 0.464439955905923 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TDRD7 ENSG00000196116 UTR5 Human protein_coding chr9:100174437 chr9:100174444 . . 0 28 hm5C_associated_SNPs_8227 1 0 2 PPIG POSTAR2 ENCODE chr9:100174430-100174529
64251 chr9 100433869 100433869 1 + G A rs145736771 100433863 + 100433843 100433883 41 AGTAGCATAACTTTTCACAGCTCGGGGATGAATTAACATGG AGTAGCATAACTTTTCACAGCTCGGGAATGAATTAACATGG < 41bp 1 0.71943357453822 1 0.688444137573242 experiment 0.56113285092356 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCBP1 ENSG00000136937 UTR3 Human protein_coding chr9:100433863 chr9:100433869 . . 0 27 hm5C_associated_SNPs_8229 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:100433847-100433870
64251 chr9 100760942 100760942 1 + C A rs535530800 100760956 + 100760936 100760976 41 AGATATCAGCACCTTGGAACCTTTGGTAAGTAACTGAGAAT AGATATAAGCACCTTGGAACCTTTGGTAAGTAACTGAGAAT < 41bp 1 0.20453868250132 1 0.271602302789688 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100760956 chr9:100760942 synonymous SNV . 0 7 hm5C_associated_SNPs_8230 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100760864-100760961
64251 chr9 100767398 100767398 1 + C T rs144253360 100767397 + 100767377 100767417 41 GGAAGCACCTGACTCAGATGCCGAGGTGGATGGTGTGGATG GGAAGCACCTGACTCAGATGCTGAGGTGGATGGTGTGGATG < 41bp 1 0.771732670806154 1 0.31056347489357 experiment 0.456534658387692 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100767397 chr9:100767398 synonymous SNV . 0 22 hm5C_associated_SNPs_8231 0 0 17 TARDBP POSTAR2 DRA001158,DRS012386 chr9:100767245-100767433
64251 chr9 100773572 100773572 1 + C T rs553733827 100773578 + 100773558 100773598 41 GAAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGA GAAGATGAGGAAGATGAGGACGATGAGGATGGTGAAGAAGA < 41bp 1 0.257189820415434 1 0.155739456415176 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773578 chr9:100773572 synonymous SNV . 0 15 hm5C_associated_SNPs_8232 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 100773575 100773575 1 + G A rs61757703 100773572 + 100773552 100773592 41 GAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGGTGA GAAGGAGAAGATGAGGAAGACGAAGACGATGAGGATGGTGA < 41bp 1 0.396575384353009 1 0.42527186870575 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773572 chr9:100773575 synonymous SNV . 0 24 hm5C_associated_SNPs_8233 0 0 40 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 100773575 100773575 1 + G A rs61757703 100773578 + 100773558 100773598 41 GAAGATGAGGAAGACGAGGACGATGAGGATGGTGAAGAAGA GAAGATGAGGAAGACGAAGACGATGAGGATGGTGAAGAAGA < 41bp 1 0.355292775135932 1 0.187925457954407 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773578 chr9:100773575 synonymous SNV . 0 18 hm5C_associated_SNPs_8234 0 0 40 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 100773578 100773578 1 + C T rs35618988 100773572 + 100773552 100773592 41 GAAGGAGAAGATGAGGAAGACGAGGACGATGAGGATGGTGA GAAGGAGAAGATGAGGAAGACGAGGATGATGAGGATGGTGA < 41bp 1 0.692143841301266 1 0.360662162303925 experiment 0.615712317397467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773572 chr9:100773578 synonymous SNV . 0 27 hm5C_associated_SNPs_8235 0 0 38 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 101915035 101915035 1 + T C rs146582850 101915030 + 101915010 101915050 41 CCAAATAATGGTTCTGTTAACACTTTGGCAGAAAATGCCAG CCAAATAATGGTTCTGTTAACACTTCGGCAGAAAATGCCAG < 41bp 1 0.373793652414441 1 0.141767382621765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGFBR1 ENSG00000106799 UTR3 Human protein_coding chr9:101915030 chr9:101915035 . . 0 26 hm5C_associated_SNPs_8238 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:101915021-101915040
64251 chr9 104307062 104307062 1 + G A rs531422157 104307070 + 104307050 104307090 41 TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTT TAATCTGATAGTAGAGGAAGCAGTGCAGGAGCTGAACTCTT < 41bp 1 0.257035846012885 1 0.638039112091064 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307070 chr9:104307062 synonymous SNV . 0 13 hm5C_associated_SNPs_8241 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr9 106901506 106901506 1 + A G rs16923746 106901519 + 106901499 106901539 41 CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGATT CTACAGTGGCCAGATTTACTCAATGTCAAAATGGAAAGATT < 41bp 1 0.323431370757992 1 0.660120189189911 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106901519 chr9:106901506 synonymous SNV . 0 8 hm5C_associated_SNPs_8242 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:106901474-106901511
64251 chr9 106901521 106901521 1 + A G rs73665520 106901519 + 106901499 106901539 41 CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGATT CTACAGTAGCCAGATTTACTCAGTGTCAAAATGGAAAGATT < 41bp 1 0.406227165805164 1 0.860399127006531 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106901519 chr9:106901521 synonymous SNV . 0 23 hm5C_associated_SNPs_8243 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:106901494-106901524
64251 chr9 107515201 107515201 1 + C T rs34856872 107515213 + 107515193 107515233 41 TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT TTGCTCATTGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT < 41bp 1 0.744642465541516 1 0.864301979541779 experiment 0.510715068916969 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107515213 chr9:107515201 stopgain 0.942 1 9 hm5C_associated_SNPs_8244 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:107515189-107515207
64251 chr9 107515214 107515214 1 + G A rs2274870 107515213 + 107515193 107515233 41 TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT TTGCTCATCGAACTGAAGTTCAGAAAGCCTTGGCCAAAGAT < 41bp 1 0.692597290582052 1 0.797424554824829 experiment 0.614805418835896 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107515213 chr9:107515214 nonsynonymous SNV 0.927 1 22 hm5C_associated_SNPs_8245 0 1 1 RPS3 POSTAR2 ENCODE chr9:107515197-107515237
64251 chr9 108536388 108536388 1 + A C rs73522022 108536406 + 108536386 108536426 41 CCAAAAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAA CCCAAAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAA < 41bp 1 0.252209551798811 1 0.175128102302551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536406 chr9:108536388 . . 0 3 hm5C_associated_SNPs_8246 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536392 108536392 1 + A T rs184855300 108536406 + 108536386 108536426 41 CCAAAAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAA CCAAAATTTTTTTTTCTTATCTACCTGTTATATTGTGCTAA < 41bp 1 0.177568355081213 1 0.105875313282013 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536406 chr9:108536392 . . 0 7 hm5C_associated_SNPs_8247 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536392 108536392 1 + A T rs184855300 108536410 + 108536390 108536430 41 AAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAATTTT AATTTTTTTTTCTTATCTACCTGTTATATTGTGCTAATTTT < 41bp 1 0.152427217203286 1 0.0514187514781952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536410 chr9:108536392 . . 0 3 hm5C_associated_SNPs_8248 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536396 108536396 1 + T A rs141597117 108536406 + 108536386 108536426 41 CCAAAAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAA CCAAAAATTTATTTTCTTATCTACCTGTTATATTGTGCTAA < 41bp 1 0.259037105655647 1 0.10272553563118 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536406 chr9:108536396 . . 0 11 hm5C_associated_SNPs_8249 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536396 108536396 1 + T A rs141597117 108536410 + 108536390 108536430 41 AAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAATTTT AAATTTATTTTCTTATCTACCTGTTATATTGTGCTAATTTT < 41bp 1 0.17056811451831 1 0.0531870126724243 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536410 chr9:108536396 . . 0 7 hm5C_associated_SNPs_8250 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536420 108536420 1 + G T rs146363879 108536406 + 108536386 108536426 41 CCAAAAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAA CCAAAAATTTTTTTTCTTATCTACCTGTTATATTTTGCTAA < 41bp 1 0.249328689360875 1 0.299383401870728 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536406 chr9:108536420 . . 0 35 hm5C_associated_SNPs_8251 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 108536420 108536420 1 + G T rs146363879 108536410 + 108536390 108536430 41 AAATTTTTTTTCTTATCTACCTGTTATATTGTGCTAATTTT AAATTTTTTTTCTTATCTACCTGTTATATTTTGCTAATTTT < 41bp 1 0.108449496785357 1 0.0773288607597351 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM38B ENSG00000095209 UTR3 Human protein_coding chr9:108536410 chr9:108536420 . . 0 31 hm5C_associated_SNPs_8252 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr9:108536339-108536630
64251 chr9 110045787 110045787 1 + C T rs182035375 110045800 + 110045780 110045820 41 CCCCCACCCCCACCGCCTTCCTCCCCAGAGCGCGAGGAGCG CCCCCACTCCCACCGCCTTCCTCCCCAGAGCGCGAGGAGCG < 41bp 1 0.529009125350689 1 0.231927067041397 experiment 0.941981749298622 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RAD23B ENSG00000119318 UTR5 Human protein_coding chr9:110045800 chr9:110045787 . . 0 8 hm5C_associated_SNPs_8253 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585673 chr9:110045779-110045807
64251 chr9 110068767 110068767 1 + C G rs1805333 110068756 + 110068736 110068776 41 CCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCT CCACCACCACAACTGTGGCTCAGGCTCCAACGCCTGTCCCT < 41bp 1 0.721484160197069 1 0.721494674682617 experiment 0.557031679605862 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068756 chr9:110068767 synonymous SNV . 0 32 hm5C_associated_SNPs_8254 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:110068750-110068791
64251 chr9 110086256 110086256 1 + G A rs61758755 110086266 + 110086246 110086286 41 TGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCT TGCTTCCAGCATTACTACAGCAGATAGGTCGAGAGAATCCT < 41bp 1 0.222475694068419 1 0.175016164779663 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110086266 chr9:110086256 synonymous SNV . 0 11 hm5C_associated_SNPs_8255 0 0 15 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:110086182-110086267
64251 chr9 114423879 114423879 1 + G C rs2273792 114423887 + 114423867 114423907 41 CCCCGCCCGGCCGGGCCCAGCAGCCCCTAGGAGCCCAGCGC CCCCGCCCGGCCCGGCCCAGCAGCCCCTAGGAGCCCAGCGC < 41bp 1 0.74153574486946 1 0.769189119338989 experiment 0.51692851026108 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GNG10 ENSG00000242616 UTR5 Human protein_coding chr9:114423887 chr9:114423879 . . 0 13 hm5C_associated_SNPs_8256 0 0 1 DDX3X POSTAR2 ENCODE chr9:114423872-114423984
64251 chr9 114423885 114423885 1 + A C rs560386271 114423887 + 114423867 114423907 41 CCCCGCCCGGCCGGGCCCAGCAGCCCCTAGGAGCCCAGCGC CCCCGCCCGGCCGGGCCCCGCAGCCCCTAGGAGCCCAGCGC < 41bp 1 0.758164438778822 1 0.801842153072357 experiment 0.483671122442356 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GNG10 ENSG00000242616 UTR5 Human protein_coding chr9:114423887 chr9:114423885 . . 0 19 hm5C_associated_SNPs_8257 0 0 1 DDX3X POSTAR2 ENCODE chr9:114423872-114423984
64251 chr9 114659226 114659226 1 + A C rs7871397 114659227 + 114659207 114659247 41 AGGCGAACCGGAGCGCGGGACCGCGGTCGCCCCGACCAGAG AGGCGAACCGGAGCGCGGGCCCGCGGTCGCCCCGACCAGAG < 41bp 1 0.791616814301495 1 0.403953105211258 experiment 0.41676637139701 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UGCG ENSG00000148154 UTR5 Human protein_coding chr9:114659227 chr9:114659226 . . 0 20 hm5C_associated_SNPs_8258 0 0 8 DDX3X POSTAR2 ENCODE chr9:114659179-114659240
64251 chr9 116023979 116023979 1 + A C rs41280225 116023959 + 116023939 116023979 41 GCTTTAGCGTGCATCAGAATCACCTGTAGGGCTTGTTAAAA GCTTTAGCGTGCATCAGAATCACCTGTAGGGCTTGTTAAAC < 41bp 1 0.615426805972389 1 0.276489675045013 experiment 0.769146388055223 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC31A1 ENSG00000136868 UTR3 Human protein_coding chr9:116023959 chr9:116023979 . . 0 41 hm5C_associated_SNPs_8261 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:116023959-116023983
64251 chr9 116024959 116024959 1 + A G rs10513202 116024958 + 116024938 116024978 41 TTTGTAATGATGATACTTAACATGAGCAGGGTGAATGACAG TTTGTAATGATGATACTTAACGTGAGCAGGGTGAATGACAG < 41bp 1 0.790401077466145 1 0.29509773850441 experiment 0.419197845067709 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC31A1 ENSG00000136868 UTR3 Human protein_coding chr9:116024958 chr9:116024959 . . 0 22 hm5C_associated_SNPs_8262 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:116024958-116024959
64251 chr9 116750631 116750631 1 + C G rs149113651 116750645 + 116750625 116750665 41 GAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGG GAGCACGAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGG < 41bp 1 0.418460976846577 1 0.389988660812378 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116750645 chr9:116750631 synonymous SNV . 0 7 hm5C_associated_SNPs_8263 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:116750630-116750631
64251 chr9 116971981 116971981 1 + C T rs138060609 116971985 + 116971965 116972005 41 GGCTCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA GGCTCCCAGGGCTCTTTGGCCTGCCAGGGTCTGATGGAGAA < 41bp 1 0.139974672595362 1 0.102886170148849 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971985 chr9:116971981 synonymous SNV . 0 17 hm5C_associated_SNPs_8265 0 0 5 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971981 116971981 1 + C T rs138060609 116971988 + 116971968 116972008 41 TCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGA TCCCAGGGCTCTTTGGCCTGCCAGGGTCTGATGGAGAACGA < 41bp 1 0.146709993153774 1 0.63696426153183 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971988 chr9:116971981 synonymous SNV . 0 14 hm5C_associated_SNPs_8266 0 0 5 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971981 116971981 1 + C T rs138060609 116971989 + 116971969 116972009 41 CCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGAG CCCAGGGCTCTTTGGCCTGCCAGGGTCTGATGGAGAACGAG < 41bp 1 0.332149490353264 1 0.725806295871735 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971989 chr9:116971981 synonymous SNV . 0 13 hm5C_associated_SNPs_8267 0 0 5 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 117063984 117063984 1 + G A rs565852420 117063993 + 117063973 117064013 41 CCCCAGAGGGCGGCCCGGCCCCCCGGTAGGTAACTGAGTGC CCCCAGAGGGCAGCCCGGCCCCCCGGTAGGTAACTGAGTGC < 41bp 1 0.344596469207929 1 0.369138598442078 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117063993 chr9:117063984 nonsynonymous SNV 0.162 1 12 hm5C_associated_SNPs_8268 0 0 11 BUD13 POSTAR2 ENCODE chr9:117063960-117063995
64251 chr9 117400957 117400957 1 + C T rs34024960 117400977 + 117400957 117400997 41 CACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCT TACTCATGCAGACTGAGCTTCATCAGCTTGTTCCTGAGGCT < 41bp 1 0.353163337556325 1 0.130630165338516 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117400977 chr9:117400957 nonsynonymous SNV 0.530 0 1 hm5C_associated_SNPs_8269 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:117400931-117400960
64251 chr9 124062241 124062241 1 + G T rs369326886 124062243 + 124062223 124062263 41 CACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAGG CACTGCGTCGCGGGGGGCTTCCCAGGCGGGGGCGCCCCAGG < 41bp 1 0.597751359188868 1 0.69160521030426 experiment 0.804497281622263 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062243 chr9:124062241 synonymous SNV . 0 19 hm5C_associated_SNPs_8272 0 0 7 DDX3X POSTAR2 ENCODE chr9:124062223-124062252
64251 chr9 124062241 124062241 1 + G T rs369326886 124062244 + 124062224 124062264 41 ACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAGGG ACTGCGTCGCGGGGGGCTTCCCAGGCGGGGGCGCCCCAGGG < 41bp 1 0.796064377719869 1 0.826332569122314 experiment 0.407871244560263 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062244 chr9:124062241 synonymous SNV . 0 18 hm5C_associated_SNPs_8273 0 0 7 DDX3X POSTAR2 ENCODE chr9:124062223-124062252
64251 chr9 124062241 124062241 1 + G T rs369326886 124062255 + 124062235 124062275 41 GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCG GGGGGCTTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCG < 41bp 1 0.439450980889205 1 0.574721455574036 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062255 chr9:124062241 synonymous SNV . 0 7 hm5C_associated_SNPs_8274 0 0 7 DDX3X POSTAR2 ENCODE chr9:124062223-124062252
64251 chr9 124062241 124062241 1 + G T rs369326886 124062257 + 124062237 124062277 41 GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAG GGGCTTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAG < 41bp 1 0.635227019601187 1 0.635010123252869 experiment 0.729545960797626 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062257 chr9:124062241 synonymous SNV . 0 5 hm5C_associated_SNPs_8275 0 0 7 DDX3X POSTAR2 ENCODE chr9:124062223-124062252
64251 chr9 124062241 124062241 1 + G T rs369326886 124062258 + 124062238 124062278 41 GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGG GGCTTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGG < 41bp 1 0.49934936069895 1 0.71086585521698 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062258 chr9:124062241 synonymous SNV . 0 4 hm5C_associated_SNPs_8276 0 0 7 DDX3X POSTAR2 ENCODE chr9:124062223-124062252
64251 chr9 125772713 125772713 1 + G A rs78302239 125772700 + 125772680 125772720 41 TGTATGCTTGGAAAGTGAATCAGAAAGAGAGAGGAGGAAAA TGTATGCTTGGAAAGTGAATCAGAAAGAGAGAGAAGGAAAA < 41bp 1 0.572791085587781 1 0.455893605947495 experiment 0.854417828824438 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125772700 chr9:125772713 synonymous SNV . 0 34 hm5C_associated_SNPs_8277 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:125772675-125772717
64251 chr9 125772714 125772714 1 + A C rs137893790 125772700 + 125772680 125772720 41 TGTATGCTTGGAAAGTGAATCAGAAAGAGAGAGGAGGAAAA TGTATGCTTGGAAAGTGAATCAGAAAGAGAGAGGCGGAAAA < 41bp 1 0.648145798362764 1 0.595414459705353 experiment 0.703708403274472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125772700 chr9:125772714 synonymous SNV . 0 35 hm5C_associated_SNPs_8278 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:125772675-125772717
64251 chr9 127101899 127101899 1 + C A rs543844372 127101884 + 127101864 127101904 41 TACATGTCACCGGAGAGGATCCATGAGAACGGCTACAACTT TACATGTCACCGGAGAGGATCCATGAGAACGGCTAAAACTT < 41bp 1 0.0897403757095981 1 0.0377092957496643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NEK6 ENSG00000119408 CDS Human protein_coding chr9:127101884 chr9:127101899 stopgain 0.999 1 36 hm5C_associated_SNPs_8279 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:127101895-127101919
64251 chr9 127982837 127982837 1 + G A rs78598675 127982849 + 127982829 127982869 41 TGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCCCAAG TGGACCACACCAGAAGTGACCAGCCCCCCACCATCCCCAAG < 41bp 1 0.55788944807958 1 0.502528011798859 experiment 0.884221103840841 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982849 chr9:127982837 nonsynonymous SNV 0.088 1 9 hm5C_associated_SNPs_8281 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:127982804-127982842
64251 chr9 127982839 127982839 1 + C A rs74769898 127982849 + 127982829 127982869 41 TGGACCACGCCAGAAGTGACCAGCCCCCCACCATCCCCAAG TGGACCACGCAAGAAGTGACCAGCCCCCCACCATCCCCAAG < 41bp 1 0.639279125975109 1 0.615866243839264 experiment 0.721441748049781 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982849 chr9:127982839 nonsynonymous SNV 0.638 3 11 hm5C_associated_SNPs_8282 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:127982804-127982842
64251 chr9 129596353 129596353 1 + A C rs183443767 129596364 + 129596344 129596384 41 CAATTAAAAAAATCTAATTCCTCAAATTTGTGTGTTCCAGT CAATTAAAACAATCTAATTCCTCAAATTTGTGTGTTCCAGT < 41bp 1 0.367997927289527 1 0.777044534683228 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB43 ENSG00000169155 UTR3 Human protein_coding chr9:129596364 chr9:129596353 . . 0 10 hm5C_associated_SNPs_8283 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:129596340-129596360
64251 chr9 130374630 130374630 1 + T G rs562125563 130374610 + 130374590 130374630 41 TGCGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGT TGCGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGG < 41bp 1 0.650158360752457 1 0.15533173084259 experiment 0.699683278495085 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP1 ENSG00000136854 UTR5 Human protein_coding chr9:130374610 chr9:130374630 . . 0 41 hm5C_associated_SNPs_8285 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:130374623-130374649
64251 chr9 130374630 130374630 1 + T G rs562125563 130374612 + 130374592 130374632 41 CGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGTCC CGGCTGGCCCAGCGCGCCCACCTGAGGAGGCGGCGGGGGCC < 41bp 1 0.657139850293505 1 0.25261127948761 experiment 0.685720299412991 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP1 ENSG00000136854 UTR5 Human protein_coding chr9:130374612 chr9:130374630 . . 0 39 hm5C_associated_SNPs_8286 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:130374623-130374649
64251 chr9 130549811 130549811 1 + C A rs34238383 130549823 + 130549803 130549843 41 ATTACAGCCTTGCGGGAGATCAAGATCCTTCAGCTTCTAAA ATTACAGCATTGCGGGAGATCAAGATCCTTCAGCTTCTAAA < 41bp 1 0.774485093312246 1 0.700615584850311 experiment 0.451029813375507 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130549823 chr9:130549811 synonymous SNV . 0 9 hm5C_associated_SNPs_8287 0 0 8 DDX24 POSTAR2 ENCODE chr9:130549796-130549938
64251 chr9 130551711 130551711 1 + C T rs3217749 130551725 + 130551705 130551745 41 CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC CATGTTTGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC < 41bp 1 0.505839038486018 1 0.425763636827469 experiment 0.988321923027965 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130551725 chr9:130551711 synonymous SNV . 0 7 hm5C_associated_SNPs_8288 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130551672-130551713
64251 chr9 130551744 130551744 1 + C T rs145338923 130551725 + 130551705 130551745 41 CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGTC < 41bp 1 0.556457505474612 1 0.394602954387665 experiment 0.887084989050777 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130551725 chr9:130551744 synonymous SNV . 0 40 hm5C_associated_SNPs_8289 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr9:130551714-130551747
64251 chr9 130565267 130565267 1 + A C rs10760502 130565266 + 130565246 130565286 41 GCAGCGGCGTCTGCGCGCGGCATAACGACCCAGGTCGCGGC GCAGCGGCGTCTGCGCGCGGCCTAACGACCCAGGTCGCGGC < 41bp 1 0.132537686117874 1 0.0555700659751892 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FPGS ENSG00000136877 CDS Human protein_coding chr9:130565266 chr9:130565267 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_8290 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:130565266-130565267
64251 chr9 130860814 130860814 1 + G C rs116892997 130860819 + 130860799 130860839 41 CTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCC CTTGCTCCCGGTGGTCAGGGCAGTGGAGCACCCAGCAGGCC < 41bp 1 0.351670368791117 1 0.387422382831573 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC25A25 ENSG00000148339 UTR5 Human protein_coding chr9:130860819 chr9:130860814 . . 0 16 hm5C_associated_SNPs_8293 0 0 1 NCBP2 POSTAR2 ENCODE chr9:130860787-130860852
64251 chr9 130860837 130860837 1 + G T rs139240119 130860819 + 130860799 130860839 41 CTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGGCC CTTGCTCCCGGTGGTGAGGGCAGTGGAGCACCCAGCAGTCC < 41bp 1 0.429308620534013 1 0.351096838712692 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC25A25 ENSG00000148339 UTR5 Human protein_coding chr9:130860819 chr9:130860837 . . 0 39 hm5C_associated_SNPs_8294 0 0 1 NCBP2 POSTAR2 ENCODE chr9:130860787-130860852
64251 chr9 131085113 131085113 1 + C G rs144235048 131085127 + 131085107 131085147 41 ACCCGCCCATCCTCCGCGGACGCCCGCTGCCATGGCGACTC ACCCGCGCATCCTCCGCGGACGCCCGCTGCCATGGCGACTC < 41bp 1 0.519358308894659 1 0.0413115322589874 experiment 0.961283382210683 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COQ4 ENSG00000167113 UTR5 Human protein_coding chr9:131085127 chr9:131085113 . . 0 7 hm5C_associated_SNPs_8295 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr9:131085105-131085128
64251 chr9 131085118 131085118 1 + C G rs372363685 131085127 + 131085107 131085147 41 ACCCGCCCATCCTCCGCGGACGCCCGCTGCCATGGCGACTC ACCCGCCCATCGTCCGCGGACGCCCGCTGCCATGGCGACTC < 41bp 1 0.515344129491876 1 0.0580699443817139 experiment 0.969311741016248 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COQ4 ENSG00000167113 UTR5 Human protein_coding chr9:131085127 chr9:131085118 . . 0 12 hm5C_associated_SNPs_8296 1 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr9:131085105-131085128
64251 chr9 131088076 131088076 1 + G A rs2270203 131088068 + 131088048 131088088 41 TGCCTTTCAGGGAGCGTCCCCGGATTTCGACATCCACCCTC TGCCTTTCAGGGAGCGTCCCCGGATTTCAACATCCACCCTC < 41bp 1 0.763867904294575 1 0.319317400455475 experiment 0.47226419141085 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ4 ENSG00000167113 CDS Human protein_coding chr9:131088068 chr9:131088076 synonymous SNV . 0 29 hm5C_associated_SNPs_8297 1 0 5 BUD13 POSTAR2 ENCODE chr9:131088038-131088167
64251 chr9 131107634 131107634 1 + G A rs56224008 131107631 + 131107611 131107651 41 TGTAGCCAACTTCCTGCAGGCCCGGGGCCTGGCCTCGGGCG TGTAGCCAACTTCCTGCAGGCCCAGGGCCTGGCCTCGGGCG < 41bp 1 0.265072269058402 1 0.322271287441254 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107631 chr9:131107634 nonsynonymous SNV 0.987 0 24 hm5C_associated_SNPs_8298 0 0 1 DDX3X POSTAR2 ENCODE chr9:131107613-131107666
64251 chr9 131133656 131133656 1 + C A rs201029924 131133638 + 131133618 131133658 41 CGGAAGTTGAGGGGAGTTTCCTGCGAGCTCGGCTTCCTCAA CGGAAGTTGAGGGGAGTTTCCTGCGAGCTCGGCTTCCTAAA < 41bp 1 0.769473722088462 1 0.471029192209244 experiment 0.461052555823076 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MIR1268A ENSG00000167118 UTR5 Human protein_coding chr9:131133638 chr9:131133656 . . 0 39 hm5C_associated_SNPs_8299 0 0 7 DDX3X POSTAR2 ENCODE chr9:131133634-131133697
64251 chr9 131152247 131152247 1 + G A rs140759094 131152242 + 131152222 131152262 41 GAGCCCAGCACTCCCTTTTCCAGCAGCTGTGGTGGGGGAGG GAGCCCAGCACTCCCTTTTCCAGCAACTGTGGTGGGGGAGG < 41bp 1 0.775497343932366 1 0.905202150344849 experiment 0.449005312135269 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIR1268A ENSG00000167118 UTR3 Human protein_coding chr9:131152242 chr9:131152247 . . 0 26 hm5C_associated_SNPs_8300 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131152220-131152262
64251 chr9 131152647 131152647 1 + G A rs371423026 131152648 + 131152628 131152668 41 ACCCTGGCTGGCCTGCCCCGCTCCACAGGCCACCAGATGGG ACCCTGGCTGGCCTGCCCCACTCCACAGGCCACCAGATGGG < 41bp 1 0.77863811151894 1 0.948610782623291 experiment 0.442723776962121 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MIR1268A ENSG00000167118 UTR3 Human protein_coding chr9:131152648 chr9:131152647 . . 0 20 hm5C_associated_SNPs_8301 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131152595-131152647
64251 chr9 131152777 131152777 1 + G A rs141115931 131152795 + 131152775 131152815 41 GCGTGTGCCTCAGTTTCCTCCTCCACAACTGAATATAGTGG GCATGTGCCTCAGTTTCCTCCTCCACAACTGAATATAGTGG < 41bp 1 0.462126268993975 1 0.966353118419647 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout MIR1268A ENSG00000167118 UTR3 Human protein_coding chr9:131152795 chr9:131152777 . . 0 3 hm5C_associated_SNPs_8302 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131152758-131152785
64251 chr9 131183748 131183748 1 + C T rs7025672 131183767 + 131183747 131183787 41 CCAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCA CTAACGTGGCAGGGATCGACCACGCTGGAGGCTTCCGGGCA < 41bp 1 0.454824460081789 1 0.654182374477386 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIR1268A ENSG00000167123 UTR5 Human protein_coding chr9:131183767 chr9:131183748 . . 0 2 hm5C_associated_SNPs_8303 0 0 2 BUD13 POSTAR2 ENCODE chr9:131183737-131183788
64251 chr9 131193481 131193481 1 + G A rs143305223 131193480 + 131193460 131193500 41 AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCCGGG AGCAGTGCCATCAGGAACCTCAGCGTAGACCTGCTCCCGGG < 41bp 1 0.709719086118288 1 0.6413254737854 experiment 0.580561827763425 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131193480 chr9:131193481 nonsynonymous SNV 0.355 3 22 hm5C_associated_SNPs_8305 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131193474-131193513
64251 chr9 131196695 131196695 1 + C T rs7258 131196705 + 131196685 131196725 41 ACAGCTACCTCGGACGGAAGCAGGTGAACCCTGAGAAGGAG ACAGCTACCTTGGACGGAAGCAGGTGAACCCTGAGAAGGAG < 41bp 1 0.621766806373498 1 0.807101845741272 experiment 0.756466387253005 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131196705 chr9:131196695 synonymous SNV . 0 11 hm5C_associated_SNPs_8306 0 0 3 BUD13 POSTAR2 ENCODE chr9:131196687-131196753
64251 chr9 131196704 131196704 1 + G A rs7259 131196705 + 131196685 131196725 41 ACAGCTACCTCGGACGGAAGCAGGTGAACCCTGAGAAGGAG ACAGCTACCTCGGACGGAAACAGGTGAACCCTGAGAAGGAG < 41bp 1 0.653791718928171 1 0.813618302345276 experiment 0.692416562143659 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131196705 chr9:131196704 synonymous SNV . 0 20 hm5C_associated_SNPs_8307 0 0 3 BUD13 POSTAR2 ENCODE chr9:131196687-131196753
64251 chr9 131345032 131345032 1 + C T rs115428827 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GCGTCGCCGGGCCCAGCTAGCTGATTCTTTCCATCTGCAGC < 41bp 1 0.279127133701451 1 0.0467479825019836 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345032 synonymous SNV . 0 22 hm5C_associated_SNPs_8308 3 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr9:131345025-131345046
64251 chr9 131351096 131351096 1 + G A rs150731568 131351098 + 131351078 131351118 41 GGATTTTTAGCAACAAGTGGCCCCCACGGATGATGAGACTG GGATTTTTAGCAACAAGTAGCCCCCACGGATGATGAGACTG < 41bp 1 0.0285635143721557 1 0.11132287979126 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131351098 chr9:131351096 synonymous SNV . 0 19 hm5C_associated_SNPs_8309 2 0 3 GRWD1 POSTAR2 ENCODE chr9:131351089-131351101
64251 chr9 131351096 131351096 1 + G A rs150731568 131351099 + 131351079 131351119 41 GATTTTTAGCAACAAGTGGCCCCCACGGATGATGAGACTGG GATTTTTAGCAACAAGTAGCCCCCACGGATGATGAGACTGG < 41bp 1 0.163674900753012 1 0.322027325630188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131351099 chr9:131351096 synonymous SNV . 0 18 hm5C_associated_SNPs_8310 2 0 3 GRWD1 POSTAR2 ENCODE chr9:131351089-131351101
64251 chr9 131351096 131351096 1 + G A rs150731568 131351100 + 131351080 131351120 41 ATTTTTAGCAACAAGTGGCCCCCACGGATGATGAGACTGGG ATTTTTAGCAACAAGTAGCCCCCACGGATGATGAGACTGGG < 41bp 1 0.0331725795964865 1 0.172164589166641 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131351100 chr9:131351096 synonymous SNV . 0 17 hm5C_associated_SNPs_8311 2 0 3 GRWD1 POSTAR2 ENCODE chr9:131351089-131351101
64251 chr9 131351096 131351096 1 + G A rs150731568 131351104 + 131351084 131351124 41 TTAGCAACAAGTGGCCCCCACGGATGATGAGACTGGGAAGG TTAGCAACAAGTAGCCCCCACGGATGATGAGACTGGGAAGG < 41bp 1 0.149377868690945 1 0.731662273406982 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131351104 chr9:131351096 synonymous SNV . 0 13 hm5C_associated_SNPs_8312 2 0 3 GRWD1 POSTAR2 ENCODE chr9:131351089-131351101
64251 chr9 131356538 131356538 1 + G A rs2227865 131356537 + 131356517 131356557 41 GTTTATGTTGTTCCGTGAAGCGAATGAACTACAGCAATGGA GTTTATGTTGTTCCGTGAAGCAAATGAACTACAGCAATGGA < 41bp 1 0.098875974835925 1 0.276121973991394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131356537 chr9:131356538 synonymous SNV . 0 22 hm5C_associated_SNPs_8313 3 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131356520-131356540
64251 chr9 131451634 131451634 1 + G T rs577482932 131451614 + 131451594 131451634 41 GCCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAG GCCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAT < 41bp 1 0.132398247177469 1 0.248007982969284 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SET ENSG00000119335 UTR5 Human protein_coding chr9:131451614 chr9:131451634 . . 0 41 hm5C_associated_SNPs_8316 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:131451500-131451640
64251 chr9 131451634 131451634 1 + G T rs577482932 131451615 + 131451595 131451635 41 CCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGC CCCGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGATC < 41bp 1 0.49558015450307 1 0.592079639434814 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SET ENSG00000119335 UTR5 Human protein_coding chr9:131451615 chr9:131451634 . . 0 40 hm5C_associated_SNPs_8317 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:131451500-131451640
64251 chr9 131451634 131451634 1 + G T rs577482932 131451617 + 131451597 131451637 41 CGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCC CGCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGATCCC < 41bp 1 0.405492371530012 1 0.123938590288162 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SET ENSG00000119335 UTR5 Human protein_coding chr9:131451617 chr9:131451634 . . 0 38 hm5C_associated_SNPs_8318 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:131451500-131451640
64251 chr9 131451634 131451634 1 + G T rs577482932 131451618 + 131451598 131451638 41 GCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCG GCCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGATCCCG < 41bp 1 0.213646577044002 1 0.207367032766342 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SET ENSG00000119335 UTR5 Human protein_coding chr9:131451618 chr9:131451634 . . 0 37 hm5C_associated_SNPs_8319 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:131451500-131451640
64251 chr9 131451634 131451634 1 + G T rs577482932 131451619 + 131451599 131451639 41 CCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGAGCCCGG CCGCCGCCGCCTCCGCCTCCCCTCCGCGAACAGGATCCCGG < 41bp 1 0.295811763505438 1 0.0304087996482849 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SET ENSG00000119335 UTR5 Human protein_coding chr9:131451619 chr9:131451634 . . 0 36 hm5C_associated_SNPs_8320 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:131451500-131451640
64251 chr9 131710017 131710017 1 + G A rs113241875 131710016 + 131709996 131710036 41 AAGATGGCGGCGGCCGCCGGCGGGCCGTGTGTGAGGTGCGG AAGATGGCGGCGGCCGCCGGCAGGCCGTGTGTGAGGTGCGG < 41bp 1 0.458199978855955 1 0.831292331218719 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131710016 chr9:131710017 nonsynonymous SNV 0.939 0 22 hm5C_associated_SNPs_8324 1 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131710015-131710047
64251 chr9 131710020 131710020 1 + C T rs550498774 131710016 + 131709996 131710036 41 AAGATGGCGGCGGCCGCCGGCGGGCCGTGTGTGAGGTGCGG AAGATGGCGGCGGCCGCCGGCGGGTCGTGTGTGAGGTGCGG < 41bp 1 0.594741290549529 1 0.894014835357666 experiment 0.810517418900942 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131710016 chr9:131710020 nonsynonymous SNV 0.913 0 25 hm5C_associated_SNPs_8325 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131710015-131710047
64251 chr9 131730813 131730813 1 + T C rs17507971 131730830 + 131730810 131730850 41 TTGTTCAGTGCCTTCGGGAACAGTCCATGCTGCTAGAAATT TTGCTCAGTGCCTTCGGGAACAGTCCATGCTGCTAGAAATT < 41bp 1 0.0472425319106214 1 0.285892575979233 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131730830 chr9:131730813 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_8326 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr9:131730800-131730820
64251 chr9 131767727 131767727 1 + A G rs144651672 131767731 + 131767711 131767751 41 TTGCACACAGTCCAGTATGGCCTTCTCAAGATCCTCAGCAA TTGCACACAGTCCAGTGTGGCCTTCTCAAGATCCTCAGCAA < 41bp 1 0.0143796970606485 1 0.0393083095550537 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131767731 chr9:131767727 nonsynonymous SNV 0.947 1 17 hm5C_associated_SNPs_8327 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:131767725-131767748
64251 chr9 131830567 131830567 1 + G A rs28365557 131830576 + 131830556 131830596 41 CCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGAC CCTCGGTGCTCACCGTCCTGCGGAACCGCTGGCTGTCAGAC < 41bp 1 0.63865139802899 1 0.581357479095459 experiment 0.722697203942021 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830576 chr9:131830567 nonsynonymous SNV 0.941 3 12 hm5C_associated_SNPs_8328 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830553-131830596
64251 chr9 131830577 131830577 1 + G A rs566373660 131830576 + 131830556 131830596 41 CCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGAC CCTCGGTGCTCGCCGTCCTGCAGAACCGCTGGCTGTCAGAC < 41bp 1 0.652766681783549 1 0.495454281568527 experiment 0.694466636432903 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830576 chr9:131830577 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_8329 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830553-131830596
64251 chr9 131846993 131846993 1 + A G rs17485947 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTGTTTGTCATCGTCGGTTTCGTGACCCT < 41bp 1 0.516703760665008 1 0.260140657424927 experiment 0.966592478669984 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131846993 synonymous SNV . 0 15 hm5C_associated_SNPs_8330 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131846965-131847000
64251 chr9 131909837 131909837 1 + G A rs549628194 131909836 + 131909816 131909856 41 CCCCATCCCCTCCCTCTGTTCGTCCCGTTTGATGAGAGGCT CCCCATCCCCTCCCTCTGTTCATCCCGTTTGATGAGAGGCT < 41bp 1 0.0783509135676748 1 0.0759182870388031 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPA ENSG00000119383 UTR3 Human protein_coding chr9:131909836 chr9:131909837 . . 0 22 hm5C_associated_SNPs_8331 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131909805-131909857
64251 chr9 132265851 132265851 1 + C G rs552627183 132265871 + 132265851 132265891 41 CCATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG GCATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG < 41bp 1 0.347494852482279 1 0.490511894226074 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132265871 chr9:132265851 . . 0 1 hm5C_associated_SNPs_8332 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132265832-132265892
64251 chr9 132265852 132265852 1 + C T rs551606978 132265871 + 132265851 132265891 41 CCATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG CTATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG < 41bp 1 0.295859844306406 1 0.628778755664825 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132265871 chr9:132265852 . . 0 2 hm5C_associated_SNPs_8333 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132265832-132265892
64251 chr9 132265860 132265860 1 + A G rs368153196 132265871 + 132265851 132265891 41 CCATTCCTCATGCAGGCCATCGATGGAAATGTCAGACAGTG CCATTCCTCGTGCAGGCCATCGATGGAAATGTCAGACAGTG < 41bp 1 0.347043714543663 1 0.622183203697205 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132265871 chr9:132265860 . . 0 10 hm5C_associated_SNPs_8334 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132265832-132265892
64251 chr9 132267193 132267193 1 + C T rs192105959 132267174 + 132267154 132267194 41 TTCCTGCTCTCCCACAGTGGCACCCGAGCTCTGTGAGGGCA TTCCTGCTCTCCCACAGTGGCACCCGAGCTCTGTGAGGGTA < 41bp 1 0.0953553624455111 1 0.157736003398895 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LINC00963 ENSG00000204054 ncRNA_exonic Human processed_transcript chr9:132267174 chr9:132267193 . . 0 40 hm5C_associated_SNPs_8335 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:132267192-132267193
64251 chr9 132618599 132618599 1 + C T rs181271773 132618609 + 132618589 132618629 41 ACCTGTCAGTCGTGTGGGGTCACCGGACCAAACCTATGGGC ACCTGTCAGTTGTGTGGGGTCACCGGACCAAACCTATGGGC < 41bp 1 0.64746681776607 1 0.378922581672668 experiment 0.70506636446786 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132618609 chr9:132618599 nonsynonymous SNV 0.714 2 11 hm5C_associated_SNPs_8337 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:132618599-132618629
64251 chr9 132897710 132897710 1 + G A rs182984721 132897716 + 132897696 132897736 41 TTCTTCTTCATTTCGGAGCTCTAAGGTGTATGCAGTTGTGA TTCTTCTTCATTTCAGAGCTCTAAGGTGTATGCAGTTGTGA < 41bp 1 0.163719018003174 1 0.210855633020401 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132897716 chr9:132897710 . . 0 15 hm5C_associated_SNPs_8338 0 0 14 ELAVL1 POSTAR2 GSE29780,GSM738185 chr9:132897667-132897710
64251 chr9 132897736 132897736 1 + A G rs2240912 132897716 + 132897696 132897736 41 TTCTTCTTCATTTCGGAGCTCTAAGGTGTATGCAGTTGTGA TTCTTCTTCATTTCGGAGCTCTAAGGTGTATGCAGTTGTGG < 41bp 1 0.177844578247922 1 0.318390011787415 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132897716 chr9:132897736 . . 0 41 hm5C_associated_SNPs_8339 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr9:132897690-132897848
64251 chr9 132898032 132898032 1 + C T rs534769669 132898046 + 132898026 132898066 41 GAGGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGT GAGGCCTAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGT < 41bp 1 0.0878579068183716 1 0.575630307197571 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132898046 chr9:132898032 . . 0 7 hm5C_associated_SNPs_8340 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:132897988-132898032
64251 chr9 132898041 132898041 1 + T C rs548506502 132898046 + 132898026 132898066 41 GAGGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGT GAGGCCCAGTGGTCTCCTTTCCAACAGGAAAAGAAGGCTGT < 41bp 1 0.0877899408341792 1 0.424809098243713 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132898046 chr9:132898041 . . 0 16 hm5C_associated_SNPs_8341 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:132898034-132898066
64251 chr9 132898050 132898050 1 + C G rs12336580 132898046 + 132898026 132898066 41 GAGGCCCAGTGGTCTTCTTTCCAACAGGAAAAGAAGGCTGT GAGGCCCAGTGGTCTTCTTTCCAAGAGGAAAAGAAGGCTGT < 41bp 1 0.281369273926348 1 0.863939642906189 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132898046 chr9:132898050 . . 0 25 hm5C_associated_SNPs_8342 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:132898034-132898066
64251 chr9 132898905 132898905 1 + G A rs192265775 132898922 + 132898902 132898942 41 ACTGTCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGA ACTATCCCAAGTTTGGGAACCTGAAAAAGTCTCCATTCAGA < 41bp 1 0.574440901622218 1 0.445203006267548 experiment 0.851118196755565 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132898922 chr9:132898905 . . 0 4 hm5C_associated_SNPs_8343 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:132898862-132898912
64251 chr9 132900350 132900350 1 + G C rs73670515 132900369 + 132900349 132900389 41 TGAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTCCCTC TCAGTGGCCAAGGACTTGATCAGCCCATTTCTTGGTCCCTC < 41bp 1 0.378133501219753 1 0.775796115398407 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132900369 chr9:132900350 . . 0 2 hm5C_associated_SNPs_8344 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr9:132900306-132900359
64251 chr9 132995443 132995443 1 + G C rs181988596 132995448 + 132995428 132995468 41 CCGCCTGAAGCCACCGGCTCCAATTGCCAGCAACCTCTGCT CCGCCTGAAGCCACCCGCTCCAATTGCCAGCAACCTCTGCT < 41bp 1 0.0664239738703058 1 0.117379575967789 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995448 chr9:132995443 . . 0 16 hm5C_associated_SNPs_8345 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132995397-132995452
64251 chr9 132995561 132995561 1 + C T rs532585238 132995579 + 132995559 132995599 41 CCCGCTCTCTTGCGCGTGTGCTTTTGTTTTTTATTTTGAAC CCTGCTCTCTTGCGCGTGTGCTTTTGTTTTTTATTTTGAAC < 41bp 1 0.0320853404869998 1 0.065133273601532 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995579 chr9:132995561 . . 0 3 hm5C_associated_SNPs_8346 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:132995540-132995576
64251 chr9 132998037 132998037 1 + G A rs565815929 132998035 + 132998015 132998055 41 GGCCTCTGGCTGCAGTGATGCCGCAGAATCCTGAGCCAGGT GGCCTCTGGCTGCAGTGATGCCACAGAATCCTGAGCCAGGT < 41bp 1 0.548459494853979 1 0.215095788240433 experiment 0.903081010292043 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132998035 chr9:132998037 . . 0 23 hm5C_associated_SNPs_8347 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:132998031-132998059
64251 chr9 133511426 133511426 1 + G A rs141995643 133511425 + 133511405 133511445 41 TCCTCAGGCCAGCTCCCCACCGGACTACACAATGGCCTGGG TCCTCAGGCCAGCTCCCCACCAGACTACACAATGGCCTGGG < 41bp 1 0.650865066884322 1 0.681458473205566 experiment 0.698269866231356 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133511425 chr9:133511426 synonymous SNV . 0 22 hm5C_associated_SNPs_8348 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:133511420-133511440
64251 chr9 133579309 133579309 1 + C T rs528727312 133579291 + 133579271 133579311 41 ATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTT ATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGTTT < 41bp 1 0.787040724811604 1 0.90818190574646 experiment 0.425918550376791 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXOSC2 ENSG00000130713 UTR3 Human protein_coding chr9:133579291 chr9:133579309 . . 0 39 hm5C_associated_SNPs_8349 0 0 13 RTCB POSTAR2 GSE38201,GSM936508 chr9:133579286-133579316
64251 chr9 133760749 133760749 1 + C T rs34276964 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGT < 41bp 1 0.010593770791295 1 0.108286499977112 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760749 synonymous SNV . 0 41 hm5C_associated_SNPs_8350 0 0 1 SLTM POSTAR2 ENCODE chr9:133760720-133760784
64251 chr9 133760983 133760983 1 + G A rs35829966 133760999 + 133760979 133761019 41 CGGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTC CGGCAACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTC < 41bp 1 0.309008574715949 1 0.829981744289398 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760999 chr9:133760983 synonymous SNV . 0 5 hm5C_associated_SNPs_8351 0 0 6 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr9 133760983 133760983 1 + G A rs35829966 133761000 + 133760980 133761020 41 GGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTCA GGCAACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTCA < 41bp 1 0.470082437409061 1 0.745192646980286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133761000 chr9:133760983 synonymous SNV . 0 4 hm5C_associated_SNPs_8352 0 0 6 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr9 133761001 133761001 1 + A C rs1056171 133760999 + 133760979 133761019 41 CGGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTC CGGCGACAGCAGGCAGTGGTCCCGCGGCCACTCAGGACTTC < 41bp 1 0.384232422699083 1 0.499974191188812 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760999 chr9:133761001 synonymous SNV . 0 23 hm5C_associated_SNPs_8353 0 0 4 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr9 133761001 133761001 1 + A C rs1056171 133761000 + 133760980 133761020 41 GGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTCA GGCGACAGCAGGCAGTGGTCCCGCGGCCACTCAGGACTTCA < 41bp 1 0.247247956585828 1 0.478059411048889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133761000 chr9:133761001 synonymous SNV . 0 22 hm5C_associated_SNPs_8354 0 0 4 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr9 133761992 133761992 1 + G C rs3088011 133761984 + 133761964 133762004 41 CCAAATAGCCCCAGACTGGGCCCAGGCAGGTCTGCAAGGGC CCAAATAGCCCCAGACTGGGCCCAGGCACGTCTGCAAGGGC < 41bp 1 0.248076289460586 1 0.273438215255737 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133761984 chr9:133761992 . . 0 29 hm5C_associated_SNPs_8355 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486177 chr9:133761992-133761993
64251 chr9 133761992 133761992 1 + G C rs3088011 133761985 + 133761965 133762005 41 CAAATAGCCCCAGACTGGGCCCAGGCAGGTCTGCAAGGGCC CAAATAGCCCCAGACTGGGCCCAGGCACGTCTGCAAGGGCC < 41bp 1 0.237021946830685 1 0.253504544496536 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133761985 chr9:133761992 . . 0 28 hm5C_associated_SNPs_8356 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486177 chr9:133761992-133761993
64251 chr9 133761992 133761992 1 + G C rs3088011 133761986 + 133761966 133762006 41 AAATAGCCCCAGACTGGGCCCAGGCAGGTCTGCAAGGGCCC AAATAGCCCCAGACTGGGCCCAGGCACGTCTGCAAGGGCCC < 41bp 1 0.404668971926656 1 0.418241381645203 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133761986 chr9:133761992 . . 0 27 hm5C_associated_SNPs_8357 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486177 chr9:133761992-133761993
64251 chr9 134026024 134026024 1 + T C rs75412063 134026009 + 134025989 134026029 41 TGTGGCTTCTACAGATTGCACACTTTCAGAAGGAGTTGGAA TGTGGCTTCTACAGATTGCACACTTTCAGAAGGAGCTGGAA < 41bp 1 0.110703534270033 1 0.0532021522521973 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134026009 chr9:134026024 synonymous SNV . 0 36 hm5C_associated_SNPs_8358 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:134026020-134026060
64251 chr9 134374274 134374274 1 + C G rs3739501 134374276 + 134374256 134374296 41 CAGAGTGTGGGTATACATCTCAGATGCCCATCTACCCACTG CAGAGTGTGGGTATACATGTCAGATGCCCATCTACCCACTG < 41bp 1 0.417544788846883 1 0.244955867528915 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PRRC2B ENSG00000130723 UTR3 Human protein_coding chr9:134374276 chr9:134374274 . . 0 19 hm5C_associated_SNPs_8359 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831621 chr9:134374260-134374280
64251 chr9 134398914 134398914 1 + G A rs10257 134398897 + 134398877 134398917 41 CCTCCTTCATGAACACCCAGCAACCTGAGCAAGTCCCGGCC CCTCCTTCATGAACACCCAGCAACCTGAGCAAGTCCCAGCC < 41bp 1 0.410817582542941 1 0.391762375831604 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POMT1 ENSG00000130714 UTR3 Human protein_coding chr9:134398897 chr9:134398914 . . 0 38 hm5C_associated_SNPs_8360 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:134398907-134398923
64251 chr9 135546021 135546021 1 + G A rs146201597 135546032 + 135546012 135546052 41 GGGGCCCGCGGACGACGGGCCTGCGCCGTCTGGGGAGGAGG GGGGCCCGCAGACGACGGGCCTGCGCCGTCTGGGGAGGAGG < 41bp 1 0.580474465069322 1 0.0947945415973663 experiment 0.839051069861357 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135546032 chr9:135546021 synonymous SNV . 0 10 hm5C_associated_SNPs_8361 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:135546020-135546040
64251 chr9 135919225 135919225 1 + C A rs150056568 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCCGGCCCGAGAAGGAGGCCTTTTTCCACAAGGAGCTGCC < 41bp 1 0.0471820134877633 1 0.0343334376811981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919225 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_8363 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:135919213-135919245
64251 chr9 135926262 135926262 1 + A C rs573684000 135926282 + 135926262 135926302 41 AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC CGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC < 41bp 1 0.649441920388286 1 0.548700869083405 experiment 0.701116159223429 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926282 chr9:135926262 nonsynonymous SNV 0.946 0 1 hm5C_associated_SNPs_8364 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135926252-135926281
64251 chr9 135926322 135926322 1 + G A rs183668839 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTAC < 41bp 1 0.505529571382455 1 0.404850125312805 experiment 0.988940857235091 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926303 chr9:135926322 nonsynonymous SNV 0.200 2 40 hm5C_associated_SNPs_8365 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr9:135926316-135926336
64251 chr9 135933324 135933324 1 + G A rs199967129 135933325 + 135933305 135933345 41 GACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGAC GACTTCAAGCCATCCGACGACAGTGAAAACGAAATGGAGAC < 41bp 1 0.402505653165546 1 0.657388269901276 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135933325 chr9:135933324 nonsynonymous SNV 0.826 3 20 hm5C_associated_SNPs_8366 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:135933321-135933376
64251 chr9 135933334 135933334 1 + C T rs543316151 135933325 + 135933305 135933345 41 GACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGAC GACTTCAAGCCATCCGACGGCAGTGAAAATGAAATGGAGAC < 41bp 1 0.310889167268623 1 0.560102343559265 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135933325 chr9:135933334 synonymous SNV . 0 30 hm5C_associated_SNPs_8367 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:135933321-135933376
64251 chr9 135947052 135947052 1 + G C rs547424025 135947032 + 135947012 135947052 41 ACTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGG ACTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGC < 41bp 1 0.333569123039221 1 0.378930151462555 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947032 chr9:135947052 synonymous SNV . 0 41 hm5C_associated_SNPs_8413 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947052 135947052 1 + G C rs547424025 135947033 + 135947013 135947053 41 CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGG CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGCG < 41bp 1 0.480291887148484 1 0.241748154163361 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947033 chr9:135947052 synonymous SNV . 0 40 hm5C_associated_SNPs_8414 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947052 135947052 1 + G C rs547424025 135947035 + 135947015 135947055 41 CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCC CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGCGCC < 41bp 1 0.275971674593062 1 0.105942100286484 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947035 chr9:135947052 synonymous SNV . 0 38 hm5C_associated_SNPs_8415 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947052 135947052 1 + G C rs547424025 135947036 + 135947016 135947056 41 CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCCC CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGCGCCC < 41bp 1 0.535373023210282 1 0.19563564658165 experiment 0.929253953579436 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947036 chr9:135947052 synonymous SNV . 0 37 hm5C_associated_SNPs_8416 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947052 135947052 1 + G C rs547424025 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGCGCCCCCCCTGTGCC < 41bp 1 0.67835732459027 1 0.710643708705902 experiment 0.643285350819461 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947052 synonymous SNV . 0 27 hm5C_associated_SNPs_8417 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947052 135947052 1 + G C rs547424025 135947048 + 135947028 135947068 41 CGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCCCC CGTGCCGCCCACGGGTGACTCCGGCGCCCCCCCTGTGCCCC < 41bp 1 0.706589715724692 1 0.807075679302216 experiment 0.586820568550615 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947048 chr9:135947052 synonymous SNV . 0 25 hm5C_associated_SNPs_8418 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947061 135947061 1 + T C rs200971679 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCCGTGCC < 41bp 1 0.756020149491474 1 0.823559939861298 experiment 0.487959701017053 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947061 synonymous SNV . 0 36 hm5C_associated_SNPs_8419 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947065 135947065 1 + C A rs199602144 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGAC < 41bp 1 0.729753473920279 1 0.805389225482941 experiment 0.540493052159442 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947065 nonsynonymous SNV 0.000 1 40 hm5C_associated_SNPs_8420 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 136216882 136216882 1 + G A rs7700 136216873 + 136216853 136216893 41 AAGGCTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACC AAGGCTGCTGGCAAAGGGGACGTCCCAACAAAGAGACCACC < 41bp 1 0.118968629328322 1 0.38500314950943 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216873 chr9:136216882 synonymous SNV . 0 30 hm5C_associated_SNPs_8421 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216882 136216882 1 + G A rs7700 136216877 + 136216857 136216897 41 CTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTC CTGCTGGCAAAGGGGACGTCCCAACAAAGAGACCACCTGTC < 41bp 1 0.11872207491589 1 0.0730959177017212 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216877 chr9:136216882 synonymous SNV . 0 26 hm5C_associated_SNPs_8422 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216882 136216882 1 + G A rs7700 136216881 + 136216861 136216901 41 TGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTCCTTC TGGCAAAGGGGACGTCCCAACAAAGAGACCACCTGTCCTTC < 41bp 1 0.789531126837316 1 0.787772178649902 experiment 0.420937746325367 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216881 chr9:136216882 synonymous SNV . 0 22 hm5C_associated_SNPs_8423 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216971 136216971 1 + T C rs148805269 136216975 + 136216955 136216995 41 GTGATGTAAAATTTCTTGGCCTGAAATTACTGTGAAGAGTA GTGATGTAAAATTTCTCGGCCTGAAATTACTGTGAAGAGTA < 41bp 1 0.358020426960799 1 0.0752498507499695 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136216975 chr9:136216971 . . 0 17 hm5C_associated_SNPs_8424 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:136216940-136216980
64251 chr9 136216971 136216971 1 + T C rs148805269 136216984 + 136216964 136217004 41 AATTTCTTGGCCTGAAATTACTGTGAAGAGTAAAACCGAGC AATTTCTCGGCCTGAAATTACTGTGAAGAGTAAAACCGAGC < 41bp 1 0.488002567023601 1 0.206247538328171 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136216984 chr9:136216971 . . 0 8 hm5C_associated_SNPs_8425 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:136216940-136216980
64251 chr9 136216994 136216994 1 + T A rs371032790 136216975 + 136216955 136216995 41 GTGATGTAAAATTTCTTGGCCTGAAATTACTGTGAAGAGTA GTGATGTAAAATTTCTTGGCCTGAAATTACTGTGAAGAGAA < 41bp 1 0.423911347235772 1 0.164913266897202 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136216975 chr9:136216994 . . 0 40 hm5C_associated_SNPs_8426 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216993-136217018
64251 chr9 136216994 136216994 1 + T A rs371032790 136216984 + 136216964 136217004 41 AATTTCTTGGCCTGAAATTACTGTGAAGAGTAAAACCGAGC AATTTCTTGGCCTGAAATTACTGTGAAGAGAAAAACCGAGC < 41bp 1 0.600640457965948 1 0.339084088802338 experiment 0.798719084068104 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136216984 chr9:136216994 . . 0 31 hm5C_associated_SNPs_8427 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216993-136217018
64251 chr9 136216994 136216994 1 + T A rs371032790 136217000 + 136216980 136217020 41 ATTACTGTGAAGAGTAAAACCGAGCTTTTTAACACTGAGTC ATTACTGTGAAGAGAAAAACCGAGCTTTTTAACACTGAGTC < 41bp 1 0.588690042778085 1 0.457859873771667 experiment 0.82261991444383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136217000 chr9:136216994 . . 0 15 hm5C_associated_SNPs_8428 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216993-136217018
64251 chr9 136216994 136216994 1 + T A rs371032790 136217004 + 136216984 136217024 41 CTGTGAAGAGTAAAACCGAGCTTTTTAACACTGAGTCAGCA CTGTGAAGAGAAAAACCGAGCTTTTTAACACTGAGTCAGCA < 41bp 1 0.0744938933828973 1 0.0467520952224731 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136217004 chr9:136216994 . . 0 11 hm5C_associated_SNPs_8429 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216993-136217018
64251 chr9 136216994 136216994 1 + T A rs371032790 136217014 + 136216994 136217034 41 TAAAACCGAGCTTTTTAACACTGAGTCAGCAGCTGAGCCCA AAAAACCGAGCTTTTTAACACTGAGTCAGCAGCTGAGCCCA < 41bp 1 0.671394567633726 1 0.296855062246323 experiment 0.657210864732548 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36B ENSG00000200831 ncRNA_exonic Human snoRNA chr9:136217014 chr9:136216994 . . 0 1 hm5C_associated_SNPs_8430 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216993-136217018
64251 chr9 136217376 136217376 1 + T A rs79897455 136217358 + 136217338 136217378 41 TTCAACCTTGAAGTGCGAATCCATGAGCTTTTTAACCCTGA TTCAACCTTGAAGTGCGAATCCATGAGCTTTTTAACCCAGA < 41bp 1 0.0890256776323992 1 0.411190867424011 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36A ENSG00000199744 ncRNA_exonic Human snoRNA chr9:136217358 chr9:136217376 . . 0 39 hm5C_associated_SNPs_8431 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:136217280-136217397
64251 chr9 136217376 136217376 1 + T A rs79897455 136217365 + 136217345 136217385 41 TTGAAGTGCGAATCCATGAGCTTTTTAACCCTGAGCAATTG TTGAAGTGCGAATCCATGAGCTTTTTAACCCAGAGCAATTG < 41bp 1 0.0599078348523367 1 0.0569513738155365 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36A ENSG00000199744 ncRNA_exonic Human snoRNA chr9:136217365 chr9:136217376 . . 0 32 hm5C_associated_SNPs_8432 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:136217280-136217397
64251 chr9 136217376 136217376 1 + T A rs79897455 136217373 + 136217353 136217393 41 CGAATCCATGAGCTTTTTAACCCTGAGCAATTGTTACAAGC CGAATCCATGAGCTTTTTAACCCAGAGCAATTGTTACAAGC < 41bp 1 0.203329749441616 1 0.133297890424728 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD36A ENSG00000199744 ncRNA_exonic Human snoRNA chr9:136217373 chr9:136217376 . . 0 24 hm5C_associated_SNPs_8433 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:136217280-136217397
64251 chr9 136892919 136892919 1 + A G rs115257516 136892908 + 136892888 136892928 41 TTCCAAGCATTTGCGGCCCACTGGCCAGTGCATCCAAAACA TTCCAAGCATTTGCGGCCCACTGGCCAGTGCGTCCAAAACA < 41bp 1 0.33659091276994 1 0.114639431238174 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136892908 chr9:136892919 . . 0 32 hm5C_associated_SNPs_8434 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136892900-136892927
64251 chr9 137004956 137004956 1 + C G rs189773125 137004936 + 137004916 137004956 41 TCCCTGTTCTGCATCTCGCTCAACAGACTGCCTCTGTCACC TCCCTGTTCTGCATCTCGCTCAACAGACTGCCTCTGTCACG < 41bp 1 0.298861638981883 1 0.285080999135971 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR5 ENSG00000196363 UTR5 Human protein_coding chr9:137004936 chr9:137004956 . . 0 41 hm5C_associated_SNPs_8437 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:137004940-137004980
64251 chr9 137004956 137004956 1 + C G rs189773125 137004939 + 137004919 137004959 41 CTGTTCTGCATCTCGCTCAACAGACTGCCTCTGTCACCGGG CTGTTCTGCATCTCGCTCAACAGACTGCCTCTGTCACGGGG < 41bp 1 0.0858070036284431 1 0.68273663520813 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR5 ENSG00000196363 UTR5 Human protein_coding chr9:137004939 chr9:137004956 . . 0 38 hm5C_associated_SNPs_8438 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:137004940-137004980
64251 chr9 137024945 137024945 1 + G C rs564985619 137024952 + 137024932 137024972 41 TCAGTCTTGTTCTGGGGGGACGGCCCACTCCGGGGAGGGGG TCAGTCTTGTTCTCGGGGGACGGCCCACTCCGGGGAGGGGG < 41bp 1 0.497265564522929 1 0.427969425916672 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137024952 chr9:137024945 . . 0 14 hm5C_associated_SNPs_8439 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:137024923-137024948
64251 chr9 137299212 137299212 1 + A G rs3132298 137299230 + 137299210 137299250 41 CCAGGCTGGCTGGCAGGCTGCAGCGGGAAGCGCCTGTGGGT CCGGGCTGGCTGGCAGGCTGCAGCGGGAAGCGCCTGTGGGT < 41bp 1 0.558223728404846 1 0.841921329498291 experiment 0.883552543190307 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RXRA ENSG00000186350 UTR5 Human protein_coding chr9:137299230 chr9:137299212 . . 0 3 hm5C_associated_SNPs_8440 0 0 1 AARS POSTAR2 ENCODE chr9:137299180-137299223
64251 chr9 137314991 137314991 1 + C G rs34767635 137314987 + 137314967 137315007 41 AAGGGGGTGTGAGGGGCGTGCTGACTGGGGCTGGTTCTTGC AAGGGGGTGTGAGGGGCGTGCTGAGTGGGGCTGGTTCTTGC < 41bp 1 0.33370110324448 1 0.712501704692841 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RXRA ENSG00000186350 intronic Human protein_coding chr9:137314987 chr9:137314991 . . 0 25 hm5C_associated_SNPs_8441 0 0 4 CSTF2T POSTAR2 ENCODE chr9:137314983-137315028
64251 chr9 137323820 137323820 1 + C G rs141382843 137323830 + 137323810 137323850 41 GCTGCCTGCGCGCCATCGTCCTCTTTAACCCTGGTATGGCC GCTGCCTGCGGGCCATCGTCCTCTTTAACCCTGGTATGGCC < 41bp 1 0.113326157204103 1 0.316991686820984 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137323830 chr9:137323820 synonymous SNV . 0 11 hm5C_associated_SNPs_8442 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:137323819-137323842
64251 chr9 137330379 137330379 1 + G A rs35478239 137330373 + 137330353 137330393 41 TGGCCCCCTGCCCGATCCACCGTCCTGAGGCAGAGTGTTGA TGGCCCCCTGCCCGATCCACCGTCCTAAGGCAGAGTGTTGA < 41bp 1 0.0377760150101195 1 0.164435058832169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RXRA ENSG00000186350;ENSG00000223795 intergenic Human other chr9:137330373 chr9:137330379 . . 0 27 hm5C_associated_SNPs_8443 0 0 1 UPF1 POSTAR2 ENCODE chr9:137330349-137330396
64251 chr9 137331485 137331485 1 + A T rs34390326 137331465 + 137331445 137331485 41 GAGCCCCTCCCCGTGGGGCACCCAGGAGGGCCCTGCCGGAA GAGCCCCTCCCCGTGGGGCACCCAGGAGGGCCCTGCCGGAT < 41bp 1 0.295944311993853 1 0.328847229480743 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RXRA ENSG00000186350;ENSG00000223795 intergenic Human other chr9:137331465 chr9:137331485 . . 0 41 hm5C_associated_SNPs_8445 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:137331483-137331510
64251 chr9 137593098 137593098 1 + C T rs116715381 137593086 + 137593066 137593106 41 CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG CTCGACTGTAAAAAGAAGACCACCAAATTCCTTGACCGCAG < 41bp 1 0.345742565300989 1 0.272157967090607 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137593086 chr9:137593098 synonymous SNV . 0 33 hm5C_associated_SNPs_8447 4 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:137593073-137593102
64251 chr9 137593099 137593099 1 + G A rs138579182 137593086 + 137593066 137593106 41 CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG CTCGACTGTAAAAAGAAGACCACCAAATTCCTCAACCGCAG < 41bp 1 0.303220987650922 1 0.17741185426712 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137593086 chr9:137593099 nonsynonymous SNV 0.112 0 34 hm5C_associated_SNPs_8448 3 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:137593073-137593102
64251 chr9 137735592 137735592 1 + G A rs10895 137735590 + 137735570 137735610 41 ATTTCTGTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGC ATTTCTGTGTTTGTTCCAAGCCATTCAGTCATGCCATGCGC < 41bp 1 0.0388083582153156 1 0.0289848744869232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LOC101448202 ENSG00000130635 UTR3 Human protein_coding chr9:137735590 chr9:137735592 . . 0 23 hm5C_associated_SNPs_8454 1 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:137735581-137735602
64251 chr9 137735592 137735592 1 + G A rs10895 137735591 + 137735571 137735611 41 TTTCTGTGTTTGTTCCAAGCCGTTCAGTCATGCCATGCGCT TTTCTGTGTTTGTTCCAAGCCATTCAGTCATGCCATGCGCT < 41bp 1 0.0154791904982982 1 0.0161564648151398 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LOC101448202 ENSG00000130635 UTR3 Human protein_coding chr9:137735591 chr9:137735592 . . 0 22 hm5C_associated_SNPs_8455 1 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:137735581-137735602
64251 chr9 138377569 138377569 1 + C G rs148457172 138377552 + 138377532 138377572 41 CCAACTCCGAGAGGAGAGAGCGCCTGACCCTCCCGCACACA CCAACTCCGAGAGGAGAGAGCGCCTGACCCTCCCGCAGACA < 41bp 1 0.439206021343711 1 0.191214144229889 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138377552 chr9:138377569 nonsynonymous SNV 0.002 0 38 hm5C_associated_SNPs_8456 0 0 1 TBRG4 POSTAR2 ENCODE chr9:138377554-138377594
64251 chr9 138378954 138378954 1 + T C rs61735037 138378942 + 138378922 138378962 41 TCAGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGG TCAGAAGTTCAGGCAGAGGGCCCCACCGCTCTCGGGACAGG < 41bp 1 0.271832067388826 1 0.104690223932266 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378942 chr9:138378954 synonymous SNV . 0 33 hm5C_associated_SNPs_8459 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378943 + 138378923 138378963 41 CAGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGG CAGAAGTTCAGGCAGAGGGCCCCACCGCTCTCGGGACAGGG < 41bp 1 0.0178844787068832 1 0.0539624691009521 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378943 chr9:138378954 synonymous SNV . 0 32 hm5C_associated_SNPs_8460 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378944 + 138378924 138378964 41 AGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGGG AGAAGTTCAGGCAGAGGGCCCCACCGCTCTCGGGACAGGGG < 41bp 1 0.0402689871886152 1 0.0716733038425446 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378944 chr9:138378954 synonymous SNV . 0 31 hm5C_associated_SNPs_8461 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378945 + 138378925 138378965 41 GAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGGGG GAAGTTCAGGCAGAGGGCCCCACCGCTCTCGGGACAGGGGG < 41bp 1 0.375143898395001 1 0.0814569294452667 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378945 chr9:138378954 synonymous SNV . 0 30 hm5C_associated_SNPs_8462 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378966 + 138378946 138378986 41 ACCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT ACCGCTCTCGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT < 41bp 1 0.0837419245075373 1 0.135606646537781 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378966 chr9:138378954 synonymous SNV . 0 9 hm5C_associated_SNPs_8463 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378967 + 138378947 138378987 41 CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG CCGCTCTCGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG < 41bp 1 0.0950694722136219 1 0.0668785572052002 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378967 chr9:138378954 synonymous SNV . 0 8 hm5C_associated_SNPs_8464 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378954 138378954 1 + T C rs61735037 138378968 + 138378948 138378988 41 CGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT CGCTCTCGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT < 41bp 1 0.364443677791368 1 0.481549650430679 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378968 chr9:138378954 synonymous SNV . 0 7 hm5C_associated_SNPs_8465 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138395661 138395661 1 + C T rs529195453 138395653 + 138395633 138395673 41 TCTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTC TCTTTGGCCCCACGGTCCGCCTGCCGGATCTCATCATCTTC < 41bp 1 0.442064081645324 1 0.153748869895935 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395653 chr9:138395661 synonymous SNV . 0 29 hm5C_associated_SNPs_8466 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr9 138396251 138396251 1 + A G rs535 138396249 + 138396229 138396269 41 GACCTCAGTGGCTGGTATGGCCAAGCTGCTAGAAGATGCTG GACCTCAGTGGCTGGTATGGCCGAGCTGCTAGAAGATGCTG < 41bp 1 0.654638163519505 1 0.275636553764343 experiment 0.690723672960991 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LOC101928525 ENSG00000226706 ncRNA_intronic Human antisense chr9:138396249 chr9:138396251 . . 0 23 hm5C_associated_SNPs_8467 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:138396240-138396260
64251 chr9 139228931 139228931 1 + G A rs146709689 139228915 + 139228895 139228935 41 TCTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGG TCTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCACTGG < 41bp 1 0.141034436755298 1 0.0588949620723724 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228915 chr9:139228931 synonymous SNV . 0 37 hm5C_associated_SNPs_8469 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr9 139228931 139228931 1 + G A rs146709689 139228916 + 139228896 139228936 41 CTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGGA CTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCACTGGA < 41bp 1 0.4466105931923 1 0.108124136924744 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228916 chr9:139228931 synonymous SNV . 0 36 hm5C_associated_SNPs_8470 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr9 139234206 139234206 1 + C T rs141313816 139234211 + 139234191 139234231 41 CCTGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGCAGG CCTGGGAAATGCCTATGTGTCCATGGGGCGCCCAGCGCAGG < 41bp 1 0.265236598217137 1 0.179475367069244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139234211 chr9:139234206 synonymous SNV . 0 16 hm5C_associated_SNPs_8471 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:139234206-139234207
64251 chr9 139234206 139234206 1 + C T rs141313816 139234212 + 139234192 139234232 41 CTGGGAAATGCCTACGTGTCCATGGGGCGCCCAGCGCAGGC CTGGGAAATGCCTATGTGTCCATGGGGCGCCCAGCGCAGGC < 41bp 1 0.699713171237181 1 0.391796946525574 experiment 0.600573657525638 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139234212 chr9:139234206 synonymous SNV . 0 15 hm5C_associated_SNPs_8472 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:139234206-139234207
64251 chr9 139702384 139702384 1 + C G rs533267449 139702391 + 139702371 139702411 41 ACCCCTCCCGTCCCGCCGAGCCGGCGCCAAGATGGCGGCGC ACCCCTCCCGTCCGGCCGAGCCGGCGCCAAGATGGCGGCGC < 41bp 1 0.398875190411976 1 0.616852402687073 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702391 chr9:139702384 . . 0 14 hm5C_associated_SNPs_8480 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:139702360-139702420
64251 chr9 139702384 139702384 1 + C G rs533267449 139702392 + 139702372 139702412 41 CCCCTCCCGTCCCGCCGAGCCGGCGCCAAGATGGCGGCGCT CCCCTCCCGTCCGGCCGAGCCGGCGCCAAGATGGCGGCGCT < 41bp 1 0.739025511999573 1 0.870224416255951 experiment 0.521948976000854 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702392 chr9:139702384 . . 0 13 hm5C_associated_SNPs_8481 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:139702360-139702420
64251 chr9 139702384 139702384 1 + C G rs533267449 139702395 + 139702375 139702415 41 CTCCCGTCCCGCCGAGCCGGCGCCAAGATGGCGGCGCTGAC CTCCCGTCCGGCCGAGCCGGCGCCAAGATGGCGGCGCTGAC < 41bp 1 0.569377556106798 1 0.291456520557404 experiment 0.861244887786404 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702395 chr9:139702384 . . 0 10 hm5C_associated_SNPs_8482 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:139702360-139702420
64251 chr9 139702468 139702468 1 + G A rs11537630 139702478 + 139702458 139702498 41 GAGCAGCCGCGGCTGAGGTTCCCGAGTCGCCGCTCGGGGCT GAGCAGCCGCAGCTGAGGTTCCCGAGTCGCCGCTCGGGGCT < 41bp 1 0.790170834588461 1 0.626397371292114 experiment 0.419658330823078 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702478 chr9:139702468 . . 0 11 hm5C_associated_SNPs_8483 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:139702455-139702499
64251 chr9 139702577 139702577 1 + G A rs377030067 139702562 + 139702542 139702582 41 GGCCTCCGGGGGGGCCGGGGCCGCCGGGACATGGTGCCAGT GGCCTCCGGGGGGGCCGGGGCCGCCGGGACATGGTACCAGT < 41bp 1 0.395587751830041 1 0.319463163614273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702562 chr9:139702577 . . 0 36 hm5C_associated_SNPs_8484 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:139702560-139702580
64251 chr9 139702577 139702577 1 + G A rs377030067 139702578 + 139702558 139702598 41 GGGGCCGCCGGGACATGGTGCCAGTCGCACCCCTTCCCCGC GGGGCCGCCGGGACATGGTACCAGTCGCACCCCTTCCCCGC < 41bp 1 0.38256159035609 1 0.199964046478271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC183-AS1 ENSG00000273066 ncRNA_exonic Human processed_transcript chr9:139702578 chr9:139702577 . . 0 20 hm5C_associated_SNPs_8485 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:139702560-139702580
64251 chr9 139728309 139728309 1 + G A rs145215909 139728307 + 139728287 139728327 41 GCAGTCAGACTTGTCCTGTGCCGGCACTGCTGGGGAGGCCC GCAGTCAGACTTGTCCTGTGCCAGCACTGCTGGGGAGGCCC < 41bp 1 0.0619401686405537 1 0.0896539688110352 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139728307 chr9:139728309 synonymous SNV . 0 23 hm5C_associated_SNPs_8486 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:139728302-139728314
64251 chr9 139730246 139730246 1 + C T rs550622599 139730261 + 139730241 139730281 41 CGCCACGCTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG CGCCATGCTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG < 41bp 1 0.545397845258683 1 0.850019097328186 experiment 0.909204309482635 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139730261 chr9:139730246 nonsynonymous SNV 0.957 4 6 hm5C_associated_SNPs_8487 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:139730240-139730280
64251 chr9 139733464 139733464 1 + G A rs375638735 139733467 + 139733447 139733487 41 CGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATCACTCTT CGCTGCCTGCAGGCCCCATCCCCAGTCAAGACATCACTCTT < 41bp 1 0.260288989969225 1 0.68065482378006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139733467 chr9:139733464 nonsynonymous SNV 0.001 0 18 hm5C_associated_SNPs_8488 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139733459-139733490
64251 chr9 139733481 139733481 1 + C A rs191514627 139733467 + 139733447 139733487 41 CGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATCACTCTT CGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATAACTCTT < 41bp 1 0.158982415831889 1 0.625841736793518 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139733467 chr9:139733481 synonymous SNV . 0 35 hm5C_associated_SNPs_8489 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139733459-139733490
64251 chr9 139734272 139734272 1 + G A rs147124725 139734259 + 139734239 139734279 41 GCCTTCAGACTGAAGAATGACTCGGACCTCTTCGGGCTGGG GCCTTCAGACTGAAGAATGACTCGGACCTCTTCAGGCTGGG < 41bp 1 0.650525626709088 1 0.60437148809433 experiment 0.698948746581824 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734259 chr9:139734272 nonsynonymous SNV 0.037 4 34 hm5C_associated_SNPs_8490 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734272 139734272 1 + G A rs147124725 139734265 + 139734245 139734285 41 AGACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGA AGACTGAAGAATGACTCGGACCTCTTCAGGCTGGGGCTGGA < 41bp 1 0.0493488430403426 1 0.0502026379108429 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734265 chr9:139734272 nonsynonymous SNV 0.037 4 28 hm5C_associated_SNPs_8491 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734272 139734272 1 + G A rs147124725 139734266 + 139734246 139734286 41 GACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG GACTGAAGAATGACTCGGACCTCTTCAGGCTGGGGCTGGAG < 41bp 1 0.105588589555133 1 0.107418358325958 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734266 chr9:139734272 nonsynonymous SNV 0.037 4 27 hm5C_associated_SNPs_8492 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734272 139734272 1 + G A rs147124725 139734271 + 139734251 139734291 41 AAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC AAGAATGACTCGGACCTCTTCAGGCTGGGGCTGGAGGAGGC < 41bp 1 0.649013133019413 1 0.801381826400757 experiment 0.701973733961174 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734271 chr9:139734272 nonsynonymous SNV 0.037 4 22 hm5C_associated_SNPs_8493 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734272 139734272 1 + G A rs147124725 139734292 + 139734272 139734312 41 GGGCTGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCAGTGA AGGCTGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCAGTGA < 41bp 1 0.218277131701349 1 0.739238500595093 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734292 chr9:139734272 nonsynonymous SNV 0.037 4 1 hm5C_associated_SNPs_8494 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139747570 139747570 1 + G A rs145912281 139747567 + 139747547 139747587 41 CCAGCAGCAGGGTCCTCAGGCTGGGCCTGGGTCCCCAACCA CCAGCAGCAGGGTCCTCAGGCTGAGCCTGGGTCCCCAACCA < 41bp 1 0.550085108537621 1 0.606786131858826 experiment 0.899829782924757 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139747567 chr9:139747570 stopgain 0.614 0 24 hm5C_associated_SNPs_8495 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:139747566-139747597
64251 chr9 139747571 139747571 1 + G T rs147821303 139747567 + 139747547 139747587 41 CCAGCAGCAGGGTCCTCAGGCTGGGCCTGGGTCCCCAACCA CCAGCAGCAGGGTCCTCAGGCTGGTCCTGGGTCCCCAACCA < 41bp 1 0.584946161832458 1 0.470835328102112 experiment 0.830107676335085 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139747567 chr9:139747571 nonsynonymous SNV 0.664 0 25 hm5C_associated_SNPs_8496 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:139747566-139747597
64251 chr9 139887666 139887666 1 + G A rs555806618 139887676 + 139887656 139887696 41 CTGGCAAAACGCGTGTGGAGCCTGGAGCGGCGACTGGCAGG CTGGCAAAACACGTGTGGAGCCTGGAGCGGCGACTGGCAGG < 41bp 1 0.343937245677135 1 0.112923562526703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887676 chr9:139887666 nonsynonymous SNV 0.031 0 11 hm5C_associated_SNPs_8498 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139887637-139887666
64251 chr9 139887667 139887667 1 + C T rs151088980 139887676 + 139887656 139887696 41 CTGGCAAAACGCGTGTGGAGCCTGGAGCGGCGACTGGCAGG CTGGCAAAACGTGTGTGGAGCCTGGAGCGGCGACTGGCAGG < 41bp 1 0.32263503577652 1 0.235451877117157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887676 chr9:139887667 synonymous SNV . 0 12 hm5C_associated_SNPs_8499 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:139887646-139887672
64251 chr9 139887803 139887803 1 + G C rs141325653 139887795 + 139887775 139887815 41 CCATGGGCTTTCCTCCCCAGCTGCAGAAGAGACAGCTGTCA CCATGGGCTTTCCTCCCCAGCTGCAGAACAGACAGCTGTCA < 41bp 1 0.669528583045454 1 0.491174846887589 experiment 0.660942833909092 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887795 chr9:139887803 nonsynonymous SNV 0.151 0 29 hm5C_associated_SNPs_8500 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:139887803-139887804
64251 chr9 139887803 139887803 1 + G C rs141325653 139887798 + 139887778 139887818 41 TGGGCTTTCCTCCCCAGCTGCAGAAGAGACAGCTGTCAGCC TGGGCTTTCCTCCCCAGCTGCAGAACAGACAGCTGTCAGCC < 41bp 1 0.644249745843037 1 0.762189388275146 experiment 0.711500508313926 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887798 chr9:139887803 nonsynonymous SNV 0.151 0 26 hm5C_associated_SNPs_8501 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:139887803-139887804
64251 chr9 139887803 139887803 1 + G C rs141325653 139887814 + 139887794 139887834 41 GCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCCCCCG GCTGCAGAACAGACAGCTGTCAGCCCGAGGAAGAGCCCCCG < 41bp 1 0.482148086200247 1 0.620062053203583 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887814 chr9:139887803 nonsynonymous SNV 0.151 0 10 hm5C_associated_SNPs_8502 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:139887803-139887804
64251 chr9 139887833 139887833 1 + C T rs566004185 139887814 + 139887794 139887834 41 GCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCCCCCG GCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCCCCTG < 41bp 1 0.529477886614955 1 0.769457876682281 experiment 0.94104422677009 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887814 chr9:139887833 nonsynonymous SNV 0.000 1 40 hm5C_associated_SNPs_8503 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139887828-139887850
64251 chr9 139975195 139975195 1 + C T rs41302685 139975202 + 139975182 139975222 41 CCCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCC CCCCACTGAAGAATGCAGAGCCAGCCGACAGGGACAGTCCC < 41bp 1 0.0774450287308058 1 0.580168187618256 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975202 chr9:139975195 synonymous SNV . 0 14 hm5C_associated_SNPs_8504 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr9 139975195 139975195 1 + C T rs41302685 139975203 + 139975183 139975223 41 CCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCCC CCCACTGAAGAATGCAGAGCCAGCCGACAGGGACAGTCCCC < 41bp 1 0.368554187185637 1 0.445291966199875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975203 chr9:139975195 synonymous SNV . 0 13 hm5C_associated_SNPs_8505 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr9 140002989 140002989 1 + T C rs4880091 140002991 + 140002971 140003011 41 AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAG AAACCTGCTCAGCCTGGACGCCTACGTGTTCAACACCGAAG < 41bp 1 0.0518480956025521 1 0.165575623512268 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002991 chr9:140002989 synonymous SNV . 0 19 hm5C_associated_SNPs_8506 2 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140002989 140002989 1 + T C rs4880091 140002992 + 140002972 140003012 41 AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAGC AACCTGCTCAGCCTGGACGCCTACGTGTTCAACACCGAAGC < 41bp 1 0.416691878202031 1 0.113255232572556 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002992 chr9:140002989 synonymous SNV . 0 18 hm5C_associated_SNPs_8507 2 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140002995 140002995 1 + C T rs118117962 140002991 + 140002971 140003011 41 AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAG AAACCTGCTCAGCCTGGATGCCTATGTGTTCAACACCGAAG < 41bp 1 0.0712661994419199 1 0.168125480413437 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002991 chr9:140002995 synonymous SNV . 0 25 hm5C_associated_SNPs_8508 2 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140002995 140002995 1 + C T rs118117962 140002992 + 140002972 140003012 41 AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAGC AACCTGCTCAGCCTGGATGCCTATGTGTTCAACACCGAAGC < 41bp 1 0.293097047430016 1 0.101776599884033 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002992 chr9:140002995 synonymous SNV . 0 24 hm5C_associated_SNPs_8509 2 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140100302 140100302 1 + G A rs367940263 140100319 + 140100299 140100339 41 CTGGGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGT CTGAGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGT < 41bp 1 0.376161847496563 1 0.550494015216827 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140100319 chr9:140100302 nonsynonymous SNV 0.997 1 4 hm5C_associated_SNPs_8510 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:140100262-140100304
64251 chr9 140100302 140100302 1 + G A rs367940263 140100320 + 140100300 140100340 41 TGGGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGTG TGAGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGTG < 41bp 1 0.704982278203627 1 0.847855389118195 experiment 0.590035443592746 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140100320 chr9:140100302 nonsynonymous SNV 0.997 1 3 hm5C_associated_SNPs_8511 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:140100262-140100304
64251 chr9 140110238 140110238 1 + T C rs76182525 140110226 + 140110206 140110246 41 GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGCGTGGCCCA < 41bp 1 0.135177008020036 1 0.0520917475223541 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110226 chr9:140110238 synonymous SNV . 0 33 hm5C_associated_SNPs_8515 0 0 1 PPIG POSTAR2 ENCODE chr9:140110223-140110250
64251 chr9 140110238 140110238 1 + T C rs76182525 140110236 + 140110216 140110256 41 TCCGAGCAGCCATCCAGGAGCGTGTGGCCCAGGGCCAGACT TCCGAGCAGCCATCCAGGAGCGCGTGGCCCAGGGCCAGACT < 41bp 1 0.525545778984104 1 0.312163114547729 experiment 0.948908442031793 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110236 chr9:140110238 synonymous SNV . 0 23 hm5C_associated_SNPs_8516 0 0 1 PPIG POSTAR2 ENCODE chr9:140110223-140110250
64251 chr9 140135784 140135784 1 + C A rs11545612 140135802 + 140135782 140135822 41 CTCCTGCTTCCCCGCCGCCGCCGCCGCCATCATGAGGGAAA CTACTGCTTCCCCGCCGCCGCCGCCGCCATCATGAGGGAAA < 41bp 1 0.128223957270403 1 0.0838532149791718 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TUBB4B ENSG00000188229 UTR5 Human protein_coding chr9:140135802 chr9:140135784 . . 0 3 hm5C_associated_SNPs_8517 0 0 20 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140135740-140135800
64251 chr9 140135797 140135797 1 + C A rs556036177 140135802 + 140135782 140135822 41 CTCCTGCTTCCCCGCCGCCGCCGCCGCCATCATGAGGGAAA CTCCTGCTTCCCCGCAGCCGCCGCCGCCATCATGAGGGAAA < 41bp 1 0.131517780090294 1 0.0719948709011078 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TUBB4B ENSG00000188229 UTR5 Human protein_coding chr9:140135802 chr9:140135797 . . 0 16 hm5C_associated_SNPs_8518 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140135740-140135800
64251 chr9 140167022 140167022 1 + G A rs3204123 140167018 + 140166998 140167038 41 TCACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGT TCACCTGCACCCCAGGGTGGCCCCATCTAAGCTGGAGGCGT < 41bp 1 0.432324088142509 1 0.126608431339264 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167018 chr9:140167022 synonymous SNV . 0 25 hm5C_associated_SNPs_8519 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:140167021-140167022
64251 chr9 140167022 140167022 1 + G A rs3204123 140167019 + 140166999 140167039 41 CACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTT CACCTGCACCCCAGGGTGGCCCCATCTAAGCTGGAGGCGTT < 41bp 1 0.147947100820191 1 0.214255839586258 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167019 chr9:140167022 synonymous SNV . 0 24 hm5C_associated_SNPs_8520 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:140167021-140167022
64251 chr9 140167022 140167022 1 + G A rs3204123 140167020 + 140167000 140167040 41 ACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTTG ACCTGCACCCCAGGGTGGCCCCATCTAAGCTGGAGGCGTTG < 41bp 1 0.0729847723441524 1 0.249065071344376 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167020 chr9:140167022 synonymous SNV . 0 23 hm5C_associated_SNPs_8521 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:140167021-140167022
64251 chr9 140167022 140167022 1 + G A rs3204123 140167021 + 140167001 140167041 41 CCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTTGC CCTGCACCCCAGGGTGGCCCCATCTAAGCTGGAGGCGTTGC < 41bp 1 0.289842984533631 1 0.238022446632385 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167021 chr9:140167022 synonymous SNV . 0 22 hm5C_associated_SNPs_8522 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:140167021-140167022
64251 chr9 140167349 140167349 1 + T C rs538244324 140167348 + 140167328 140167368 41 CGCCGGCCCTGGAGCTGCCCCTCCCCAGCGTGCCCGCCCCT CGCCGGCCCTGGAGCTGCCCCCCCCCAGCGTGCCCGCCCCT < 41bp 1 0.266743553117276 1 0.13205748796463 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167348 chr9:140167349 nonsynonymous SNV 0.952 4 22 hm5C_associated_SNPs_8523 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:140167329-140167355
64251 chr9 140175563 140175563 1 + T G rs182719883 140175579 + 140175559 140175599 41 CCGATCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAA CCGAGCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAA < 41bp 1 0.33555880433003 1 0.733950793743134 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR4A ENSG00000198113 UTR3 Human protein_coding chr9:140175579 chr9:140175563 . . 0 5 hm5C_associated_SNPs_8524 0 0 3 FXR2 POSTAR2 ENCODE chr9:140175554-140175591
64251 chr9 140175563 140175563 1 + T G rs182719883 140175580 + 140175560 140175600 41 CGATCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAAC CGAGCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAAC < 41bp 1 0.331091399238338 1 0.682592689990997 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR4A ENSG00000198113 UTR3 Human protein_coding chr9:140175580 chr9:140175563 . . 0 4 hm5C_associated_SNPs_8525 0 0 3 FXR2 POSTAR2 ENCODE chr9:140175554-140175591
64251 chr9 140175563 140175563 1 + T G rs182719883 140175583 + 140175563 140175603 41 TCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAACCCG GCCTCTGTCCCCGCCGCCGGCCCCGCTGCAGTCCCAACCCG < 41bp 1 0.544488022860764 1 0.177040129899979 experiment 0.911023954278472 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOR4A ENSG00000198113 UTR3 Human protein_coding chr9:140175583 chr9:140175563 . . 0 1 hm5C_associated_SNPs_8526 0 0 3 FXR2 POSTAR2 ENCODE chr9:140175554-140175591
64251 chr10 1054898 1054898 1 + G A rs149656462 1054906 + 1054886 1054926 41 GGATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGAAGGAGT GGATCTTCTCAGAAGAGGCCCCCTTTCATCCCTGAAGGAGT < 41bp 1 0.0300085682599896 1 0.036618709564209 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1054906 chr10:1054898 nonsynonymous SNV 0.695 1 13 hm5C_associated_SNPs_8528 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:1054897-1054898
64251 chr10 1054898 1054898 1 + G A rs149656462 1054907 + 1054887 1054927 41 GATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGAAGGAGTG GATCTTCTCAGAAGAGGCCCCCTTTCATCCCTGAAGGAGTG < 41bp 1 0.0159718803205385 1 0.10677033662796 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1054907 chr10:1054898 nonsynonymous SNV 0.695 1 12 hm5C_associated_SNPs_8529 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:1054897-1054898
64251 chr10 3155620 3155620 1 + A G rs1052309 3155619 + 3155599 3155639 41 ACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC ACCCGCGGCTGGGATGAACGCGGCCGTACGCTCAGCTGTGC < 41bp 1 0.762566107265417 1 0.877486884593964 experiment 0.474867785469166 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3155619 chr10:3155620 synonymous SNV . 0 22 hm5C_associated_SNPs_8530 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3155620-3155640
64251 chr10 3159047 3159047 1 + C T rs191057630 3159066 + 3159046 3159086 41 CCAAATCTCAACTCTATGACCTGCTTTTAAGGAAGAAGGAA CTAAATCTCAACTCTATGACCTGCTTTTAAGGAAGAAGGAA < 41bp 1 0.154430251207337 1 0.105188250541687 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFKP ENSG00000067057 intronic Human protein_coding chr10:3159066 chr10:3159047 . . 0 2 hm5C_associated_SNPs_8531 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:3159030-3159051
64251 chr10 3159062 3159062 1 + T A rs149727814 3159066 + 3159046 3159086 41 CCAAATCTCAACTCTATGACCTGCTTTTAAGGAAGAAGGAA CCAAATCTCAACTCTAAGACCTGCTTTTAAGGAAGAAGGAA < 41bp 1 0.158785365854388 1 0.120429545640945 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFKP ENSG00000067057 intronic Human protein_coding chr10:3159066 chr10:3159062 . . 0 17 hm5C_associated_SNPs_8532 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr10:3159060-3159080
64251 chr10 5790729 5790729 1 + C T rs11593253 5790732 + 5790712 5790752 41 TTCAGAATCCTTTGATACTTCTGTTTGTGGAATAGCCACAG TTCAGAATCCTTTGATATTTCTGTTTGTGGAATAGCCACAG < 41bp 1 0.436146230552613 1 0.122759699821472 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5790732 chr10:5790729 nonsynonymous SNV 0.001 1 18 hm5C_associated_SNPs_8535 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:5790711-5790757
64251 chr10 5790738 5790738 1 + G A rs183849963 5790732 + 5790712 5790752 41 TTCAGAATCCTTTGATACTTCTGTTTGTGGAATAGCCACAG TTCAGAATCCTTTGATACTTCTGTTTATGGAATAGCCACAG < 41bp 1 0.345036634842071 1 0.125387072563171 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5790732 chr10:5790738 nonsynonymous SNV 0.004 0 27 hm5C_associated_SNPs_8536 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:5790711-5790757
64251 chr10 6131082 6131082 1 + G C rs112177726 6131098 + 6131078 6131118 41 GGCGGGTTTCCGCGGAGTGCCGCCCGGCTCCGCTCTGCCGC GGCGCGTTTCCGCGGAGTGCCGCCCGGCTCCGCTCTGCCGC < 41bp 1 0.735986635313082 1 0.256318151950836 experiment 0.528026729373837 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM17 ENSG00000134453 UTR5 Human protein_coding chr10:6131098 chr10:6131082 . . 0 5 hm5C_associated_SNPs_8537 0 0 23 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:6131062-6131114
64251 chr10 6245174 6245174 1 + G A rs202167699 6245160 + 6245140 6245180 41 TTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAGCGTCGG TTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAACGTCGG < 41bp 1 0.495968231789231 1 0.25057515501976 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PFKFB3 ENSG00000170525 UTR5 Human protein_coding chr10:6245160 chr10:6245174 . . 0 35 hm5C_associated_SNPs_8538 0 0 3 RBM15 POSTAR2 ENCODE chr10:6245139-6245179
64251 chr10 6245178 6245178 1 + C T rs558760497 6245160 + 6245140 6245180 41 TTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAGCGTCGG TTTGTTCCGGGGGTCGGCGGCCGCTCTCCTGCCAGCGTTGG < 41bp 1 0.480114289180398 1 0.301882266998291 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PFKFB3 ENSG00000170525 UTR5 Human protein_coding chr10:6245160 chr10:6245178 . . 0 39 hm5C_associated_SNPs_8539 0 0 4 PPIG POSTAR2 ENCODE chr10:6245178-6245216
64251 chr10 12111090 12111090 1 + T A rs1279138 12111105 + 12111085 12111125 41 CTCTCTTCTGGCGTGGCTACCAGACCGAGCGGGGCGTTTAC CTCTCATCTGGCGTGGCTACCAGACCGAGCGGGGCGTTTAC < 41bp 1 0.535938141216282 1 0.444387406110764 experiment 0.928123717567435 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12111105 chr10:12111090 nonsynonymous SNV 0.223 0 6 hm5C_associated_SNPs_8548 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:12111058-12111096
64251 chr10 12148361 12148361 1 + T C rs561946429 12148373 + 12148353 12148393 41 TTCAATGGTGCCCAGATCATCTTTGACACATTCATCTCTGG TTCAATGGCGCCCAGATCATCTTTGACACATTCATCTCTGG < 41bp 1 0.149708246250613 1 0.192356288433075 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12148373 chr10:12148361 synonymous SNV . 0 9 hm5C_associated_SNPs_8549 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:12148341-12148362
64251 chr10 12191697 12191697 1 + T C rs141011007 12191687 + 12191667 12191707 41 AATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT AATCATTGAAGTTGGAGATACACCGAAAGACAGAGCTTTAT < 41bp 1 0.593816970381208 1 0.0587634444236755 experiment 0.812366059237584 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191687 chr10:12191697 synonymous SNV . 0 31 hm5C_associated_SNPs_8551 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr10:12191670-12191705
64251 chr10 14885598 14885598 1 + C T rs41284449 14885600 + 14885580 14885620 41 GGCCCTTGACCAGTGAGCCCCCTCCAAGGTGGGCAAGGCGA GGCCCTTGACCAGTGAGCTCCCTCCAAGGTGGGCAAGGCGA < 41bp 1 0.0618291073719251 1 0.386961966753006 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HSPA14 ENSG00000187522 UTR3 Human protein_coding chr10:14885600 chr10:14885598 . . 0 19 hm5C_associated_SNPs_8558 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:14885594-14885616
64251 chr10 15139554 15139554 1 + C T rs536293708 15139571 + 15139551 15139591 41 CGCCGCCCTCCCGGTTGGGCCGCCCAGTCCCGGGCCGGGCG CGCTGCCCTCCCGGTTGGGCCGCCCAGTCCCGGGCCGGGCG < 41bp 1 0.487892590140433 1 0.568672597408295 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPP38 ENSG00000152464 UTR5 Human protein_coding chr10:15139571 chr10:15139554 . . 0 4 hm5C_associated_SNPs_8566 0 0 1 DDX3X POSTAR2 ENCODE chr10:15139552-15139614
64251 chr10 17271365 17271365 1 + T C rs373139864 17271373 + 17271353 17271393 41 GTTCGCCTCTTCTCCGGGAGCCAGTCCGCGCCACCGCCGCC GTTCGCCTCTTCCCCGGGAGCCAGTCCGCGCCACCGCCGCC < 41bp 1 0.612762440560123 1 0.0966763198375702 experiment 0.774475118879754 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271373 chr10:17271365 . . 0 13 hm5C_associated_SNPs_8567 0 0 28 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:17271320-17271380
64251 chr10 17271378 17271378 1 + C G rs559734613 17271373 + 17271353 17271393 41 GTTCGCCTCTTCTCCGGGAGCCAGTCCGCGCCACCGCCGCC GTTCGCCTCTTCTCCGGGAGCCAGTGCGCGCCACCGCCGCC < 41bp 1 0.641912738004805 1 0.299074828624725 experiment 0.716174523990391 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271373 chr10:17271378 . . 0 26 hm5C_associated_SNPs_8568 0 0 28 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:17271320-17271380
64251 chr10 17271395 17271395 1 + C T rs200253669 17271407 + 17271387 17271427 41 CGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCCATGTCC CGCCGCCGTCCAGGCCATCGCCACCCTCCGCAGCCATGTCC < 41bp 1 0.502605168015275 1 0.0768250226974487 experiment 0.994789663969451 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271407 chr10:17271395 . . 0 9 hm5C_associated_SNPs_8569 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:17271340-17271400
64251 chr10 17271400 17271400 1 + G A rs3758410 17271407 + 17271387 17271427 41 CGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCCATGTCC CGCCGCCGCCCAGACCATCGCCACCCTCCGCAGCCATGTCC < 41bp 1 0.46787922656657 1 0.0531424582004547 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271407 chr10:17271400 . . 0 14 hm5C_associated_SNPs_8570 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:17271340-17271400
64251 chr10 17271410 17271410 1 + C A rs564342704 17271407 + 17271387 17271427 41 CGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCCATGTCC CGCCGCCGCCCAGGCCATCGCCAACCTCCGCAGCCATGTCC < 41bp 1 0.49794185796864 1 0.16185861825943 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271407 chr10:17271410 . . 0 24 hm5C_associated_SNPs_8571 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:17271340-17271460
64251 chr10 17271963 17271963 1 + A C rs149942621 17271952 + 17271932 17271972 41 GTCGAGGTGGAGCGCGACAACCTGGCCGAGGACATCATGCG GTCGAGGTGGAGCGCGACAACCTGGCCGAGGCCATCATGCG < 41bp 1 0.445984984435506 1 0.341727793216705 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271952 chr10:17271963 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_8572 0 0 12 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr10:17271920-17271967
64251 chr10 17275861 17275861 1 + C T rs4903 17275853 + 17275833 17275873 41 AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAA AGCCTGACCTCACGGCTGCCCTGCGTGATGTACGTCAGCAA < 41bp 1 0.644870930969309 1 0.686524510383606 experiment 0.710258138061381 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275853 chr10:17275861 synonymous SNV . 0 29 hm5C_associated_SNPs_8573 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr10 17275861 17275861 1 + C T rs4903 17275856 + 17275836 17275876 41 CTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATAT CTGACCTCACGGCTGCCCTGCGTGATGTACGTCAGCAATAT < 41bp 1 0.490324611059656 1 0.204555660486221 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275856 chr10:17275861 synonymous SNV . 0 26 hm5C_associated_SNPs_8574 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr10 22031654 22031654 1 + C T rs538509781 22031674 + 22031654 22031694 41 CTTCTTTCAGAAAGGGGCCACTGTGGAAAGTGCTGGTGGGG TTTCTTTCAGAAAGGGGCCACTGTGGAAAGTGCTGGTGGGG < 41bp 1 0.305007951427416 1 0.503979027271271 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MLLT10 ENSG00000078403 UTR3 Human protein_coding chr10:22031674 chr10:22031654 . . 0 1 hm5C_associated_SNPs_8575 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:22031637-22031676
64251 chr10 22031679 22031679 1 + G C rs117330146 22031674 + 22031654 22031694 41 CTTCTTTCAGAAAGGGGCCACTGTGGAAAGTGCTGGTGGGG CTTCTTTCAGAAAGGGGCCACTGTGCAAAGTGCTGGTGGGG < 41bp 1 0.233756281610272 1 0.466979026794434 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MLLT10 ENSG00000078403 UTR3 Human protein_coding chr10:22031674 chr10:22031679 . . 0 26 hm5C_associated_SNPs_8576 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:22031658-22031694
64251 chr10 24816990 24816990 1 + G A rs145973323 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAAATCTGGAGATGCCACCAGCCACAGGCCCACTG < 41bp 1 0.0951822220753011 1 0.0749241709709167 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24816990 synonymous SNV . 0 23 hm5C_associated_SNPs_8577 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24816990 24816990 1 + G A rs145973323 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATCTGGAGATGCCACCAGCCACAGGCCCACTGCCAA < 41bp 1 0.272014994299207 1 0.809942722320557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24816990 synonymous SNV . 0 19 hm5C_associated_SNPs_8578 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 27469913 27469913 1 + T C rs115175971 27469905 + 27469885 27469925 41 CTGCGGTAGACTGGTGGGCACTTGGAGTTTGCTTGTTTGAA CTGCGGTAGACTGGTGGGCACTTGGAGTCTGCTTGTTTGAA < 41bp 1 0.274662654352808 1 0.175934374332428 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MASTL ENSG00000120539 CDS Human protein_coding chr10:27469905 chr10:27469913 synonymous SNV . 0 29 hm5C_associated_SNPs_8579 1 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:27469891-27469916
64251 chr10 35500774 35500774 1 + T C rs113826847 35500785 + 35500765 35500805 41 TAGTTGCTTTTGAAGGAATACAATATATAGCTGGCAAGAAT TAGTTGCTTCTGAAGGAATACAATATATAGCTGGCAAGAAT < 41bp 1 0.538162043173838 1 0.386038184165955 experiment 0.923675913652325 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CREM ENSG00000095794 UTR3 Human protein_coding chr10:35500785 chr10:35500774 . . 0 10 hm5C_associated_SNPs_8580 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:35500743-35500777
64251 chr10 35858902 35858902 1 + T A rs114057156 35858916 + 35858896 35858936 41 TGAAGTTGTTGTTACAAAATCAGTCAGACTTTGTGGGCTGA TGAAGTAGTTGTTACAAAATCAGTCAGACTTTGTGGGCTGA < 41bp 1 0.28552998479045 1 0.104400604963303 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNY ENSG00000108100 UTR3 Human protein_coding chr10:35858916 chr10:35858902 . . 0 7 hm5C_associated_SNPs_8581 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr10:35858859-35858912
64251 chr10 38409232 38409232 1 + C A rs370368478 38409244 + 38409224 38409264 41 GTGCACATCGGTAGTCCTGGCTACTAGAGAGGTTGAGGTGG GTGCACATAGGTAGTCCTGGCTACTAGAGAGGTTGAGGTGG < 41bp 1 0.43161664556301 1 0.0944057404994965 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF37A ENSG00000075407 UTR3 Human protein_coding chr10:38409244 chr10:38409232 . . 0 9 hm5C_associated_SNPs_8582 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:38409226-38409252
64251 chr10 43289400 43289400 1 + A T rs149844017 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA CGCTGTTTTCTGTTTCCAAGCCACTTGGGTCAGAGGATATA < 41bp 1 0.128029918694834 1 0.0914288759231567 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289400 nonsynonymous SNV 0.789 2 13 hm5C_associated_SNPs_8583 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chr10 43289407 43289407 1 + G A rs7921071 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA CGCTGTTTTCTGATTCCAAACCACTTGGGTCAGAGGATATA < 41bp 1 0.135450001511104 1 0.0487349629402161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289407 synonymous SNV . 0 20 hm5C_associated_SNPs_8584 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chr10 43292246 43292246 1 + G A rs151134499 43292230 + 43292210 43292250 41 TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCAGAGG < 41bp 1 0.777092176760602 1 0.800359487533569 experiment 0.445815646478796 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292230 chr10:43292246 synonymous SNV . 0 37 hm5C_associated_SNPs_8585 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:43292240-43292260
64251 chr10 43292246 43292246 1 + G A rs151134499 43292254 + 43292234 43292274 41 AGAAGGGGAAGCGGAGGAAGCTGATGAAAGCAGTGAAGAAG AGAAGGGGAAGCAGAGGAAGCTGATGAAAGCAGTGAAGAAG < 41bp 1 0.550350117169838 1 0.39582622051239 experiment 0.899299765660325 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292254 chr10:43292246 synonymous SNV . 0 13 hm5C_associated_SNPs_8586 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:43292240-43292260
64251 chr10 43292246 43292246 1 + G A rs151134499 43292264 + 43292244 43292284 41 GCGGAGGAAGCTGATGAAAGCAGTGAAGAAGAGGACTGCAC GCAGAGGAAGCTGATGAAAGCAGTGAAGAAGAGGACTGCAC < 41bp 1 0.612838863215811 1 0.525851786136627 experiment 0.774322273568378 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292264 chr10:43292246 synonymous SNV . 0 3 hm5C_associated_SNPs_8587 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:43292240-43292260
64251 chr10 43292441 43292441 1 + A G rs368223833 43292423 + 43292403 43292443 41 AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACGGC < 41bp 1 0.268609480643096 1 0.273519217967987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292423 chr10:43292441 synonymous SNV . 0 39 hm5C_associated_SNPs_8588 0 0 17 TARDBP POSTAR2 DRA001158,DRS012386 chr10:43292438-43292459
64251 chr10 51582894 51582894 1 + C T rs41306524 51582890 + 51582870 51582910 41 AGCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTA AGCTCCTTACATACCCAGCACCGATCCCCAGGACTGGCTTA < 41bp 1 0.0973813021998352 1 0.0515968799591064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582890 chr10:51582894 synonymous SNV . 0 25 hm5C_associated_SNPs_8590 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:51582864-51582896
64251 chr10 51582894 51582894 1 + C T rs41306524 51582891 + 51582871 51582911 41 GCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTAC GCTCCTTACATACCCAGCACCGATCCCCAGGACTGGCTTAC < 41bp 1 0.0947697209872708 1 0.0642650723457336 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582891 chr10:51582894 synonymous SNV . 0 24 hm5C_associated_SNPs_8591 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:51582864-51582896
64251 chr10 51582894 51582894 1 + C T rs41306524 51582895 + 51582875 51582915 41 CTTACATACCCAGCACCGACCCCCAGGACTGGCTTACCCAA CTTACATACCCAGCACCGATCCCCAGGACTGGCTTACCCAA < 41bp 1 0.637049388934916 1 0.261227041482925 experiment 0.725901222130168 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582895 chr10:51582894 synonymous SNV . 0 20 hm5C_associated_SNPs_8592 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:51582864-51582896
64251 chr10 51582911 51582911 1 + C T rs113955117 51582891 + 51582871 51582911 41 GCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTAC GCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTAT < 41bp 1 0.178420038806759 1 0.0635435581207275 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582891 chr10:51582911 nonsynonymous SNV . 0 41 hm5C_associated_SNPs_8593 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr10:51582893-51582914
64251 chr10 51582911 51582911 1 + C T rs113955117 51582895 + 51582875 51582915 41 CTTACATACCCAGCACCGACCCCCAGGACTGGCTTACCCAA CTTACATACCCAGCACCGACCCCCAGGACTGGCTTATCCAA < 41bp 1 0.52639819690408 1 0.377022564411163 experiment 0.947203606191841 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582895 chr10:51582911 nonsynonymous SNV . 0 37 hm5C_associated_SNPs_8594 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr10:51582893-51582914
64251 chr10 51584794 51584794 1 + A T rs113590757 51584778 + 51584758 51584798 41 AAAAGGTTGGAGATCAAGAGCTTCCTGATCAAGATGAGATG AAAAGGTTGGAGATCAAGAGCTTCCTGATCAAGATGTGATG < 41bp 1 0.0988960623991678 1 0.054223895072937 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCOA4 ENSG00000138293 CDS Human other chr10:51584778 chr10:51584794 nonsynonymous SNV . 0 37 hm5C_associated_SNPs_8595 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:51584750-51584808
64251 chr10 62554183 62554183 1 + T A rs145740622 62554163 + 62554143 62554183 41 GTTTCTTGCCATGTTGTTAACTATACAACCTGGCTAAAGAT GTTTCTTGCCATGTTGTTAACTATACAACCTGGCTAAAGAA < 41bp 1 0.333617659610525 1 0.770842969417572 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CDK1 ENSG00000170312 UTR3 Human protein_coding chr10:62554163 chr10:62554183 . . 0 41 hm5C_associated_SNPs_8597 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:62554054-62554184
64251 chr10 69524356 69524356 1 + T C rs377093107 69524336 + 69524316 69524356 41 GCGCAGGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCT GCGCAGGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCC < 41bp 1 0.353877939112641 1 0.346000611782074 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524336 chr10:69524356 . . 0 41 hm5C_associated_SNPs_8616 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524356 69524356 1 + T C rs377093107 69524341 + 69524321 69524361 41 GGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCTTATTT GGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCCTATTT < 41bp 1 0.712125307603542 1 0.535065650939941 experiment 0.575749384792915 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524341 chr10:69524356 . . 0 36 hm5C_associated_SNPs_8617 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524356 69524356 1 + T C rs377093107 69524347 + 69524327 69524367 41 AACCCTGCTCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTA AACCCTGCTCGCTGCGGAAGCGGGTGCTCCTATTTTTTCTA < 41bp 1 0.592933008729231 1 0.805101275444031 experiment 0.814133982541537 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524347 chr10:69524356 . . 0 30 hm5C_associated_SNPs_8618 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524356 69524356 1 + T C rs377093107 69524353 + 69524333 69524373 41 GCTCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTATTTTTT GCTCGCTGCGGAAGCGGGTGCTCCTATTTTTTCTATTTTTT < 41bp 1 0.143734238275567 1 0.212460726499557 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524353 chr10:69524356 . . 0 24 hm5C_associated_SNPs_8619 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524356 69524356 1 + T C rs377093107 69524355 + 69524335 69524375 41 TCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTATTTTTTTA TCGCTGCGGAAGCGGGTGCTCCTATTTTTTCTATTTTTTTA < 41bp 1 0.0542002355546604 1 0.0851903557777405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524355 chr10:69524356 . . 0 22 hm5C_associated_SNPs_8620 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524357 69524357 1 + T A rs367628342 69524341 + 69524321 69524361 41 GGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCTTATTT GGTTCGAACCCTGCTCGCTGCGGAAGCGGGTGCTCTAATTT < 41bp 1 0.667149827419959 1 0.390383243560791 experiment 0.665700345160082 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524341 chr10:69524357 . . 0 37 hm5C_associated_SNPs_8621 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524357 69524357 1 + T A rs367628342 69524347 + 69524327 69524367 41 AACCCTGCTCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTA AACCCTGCTCGCTGCGGAAGCGGGTGCTCTAATTTTTTCTA < 41bp 1 0.63576414055661 1 0.880392491817474 experiment 0.728471718886781 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524347 chr10:69524357 . . 0 31 hm5C_associated_SNPs_8622 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524357 69524357 1 + T A rs367628342 69524353 + 69524333 69524373 41 GCTCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTATTTTTT GCTCGCTGCGGAAGCGGGTGCTCTAATTTTTTCTATTTTTT < 41bp 1 0.217996778874506 1 0.522762298583984 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524353 chr10:69524357 . . 0 25 hm5C_associated_SNPs_8623 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 69524357 69524357 1 + T A rs367628342 69524355 + 69524335 69524375 41 TCGCTGCGGAAGCGGGTGCTCTTATTTTTTCTATTTTTTTA TCGCTGCGGAAGCGGGTGCTCTAATTTTTTCTATTTTTTTA < 41bp 1 0.262965756465888 1 0.151960611343384 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTNNA3;DNAJC12 ENSG00000213606;ENSG00000225922 intergenic Human other chr10:69524355 chr10:69524357 . . 0 23 hm5C_associated_SNPs_8624 0 0 20 SSB POSTAR2 GSE95683,GSM2521599 chr10:69524240-69524360
64251 chr10 70098948 70098948 1 + A G rs2273903 70098937 + 70098917 70098957 41 TATGGTGGCTATAATAATTACGGCTATGGGAATGATGGCTT TATGGTGGCTATAATAATTACGGCTATGGGAGTGATGGCTT < 41bp 1 0.707344413364252 1 0.322259545326233 experiment 0.585311173271495 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70098937 chr10:70098948 nonsynonymous SNV 0.995 1 32 hm5C_associated_SNPs_8625 0 0 32 TARDBP POSTAR2 DRA001158,DRS012386 chr10:70098897-70098981
64251 chr10 70098948 70098948 1 + A G rs2273903 70098955 + 70098935 70098975 41 TACGGCTATGGGAATGATGGCTTTGATGACAGAATGAGAGA TACGGCTATGGGAGTGATGGCTTTGATGACAGAATGAGAGA < 41bp 1 0.253363528430326 1 0.12833446264267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70098955 chr10:70098948 nonsynonymous SNV 0.995 1 14 hm5C_associated_SNPs_8626 0 0 32 TARDBP POSTAR2 DRA001158,DRS012386 chr10:70098897-70098981
64251 chr10 70102722 70102722 1 + A G rs118111463 70102720 + 70102700 70102740 41 CATGTCATAGTCAATAAAAACAATCCTGCAGTTGGGTTTTG CATGTCATAGTCAATAAAAACAGTCCTGCAGTTGGGTTTTG < 41bp 1 0.401773481519884 1 0.490584641695023 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPH3 ENSG00000096746 UTR3 Human protein_coding chr10:70102720 chr10:70102722 . . 0 23 hm5C_associated_SNPs_8627 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:70102626-70102747
64251 chr10 70742681 70742681 1 + C T rs537152748 70742667 + 70742647 70742687 41 TTAAAAGCACATTGTGCCTCCTTTTGACCACTTGCCAAGTC TTAAAAGCACATTGTGCCTCCTTTTGACCACTTGTCAAGTC < 41bp 1 0.0775665732909362 1 0.0393932163715363 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DDX21 ENSG00000165732 UTR3 Human protein_coding chr10:70742667 chr10:70742681 . . 0 35 hm5C_associated_SNPs_8628 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70742547-70742686
64251 chr10 71078657 71078657 1 + G C rs376464234 71078637 + 71078617 71078657 41 GAGCAGCCGCCGGAGGACCACGGCTCGCCAGGGCTGCGGAG GAGCAGCCGCCGGAGGACCACGGCTCGCCAGGGCTGCGGAC < 41bp 1 0.715693233814067 1 0.73737370967865 experiment 0.568613532371866 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HK1 ENSG00000156515 UTR5 Human protein_coding chr10:71078637 chr10:71078657 . . 0 41 hm5C_associated_SNPs_8630 0 0 1 AKAP8L POSTAR2 ENCODE chr10:71078582-71078665
64251 chr10 71160964 71160964 1 + G A rs546581508 71160944 + 71160924 71160964 41 GCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCG GCACTTCTCTCTTCAAGCGGCGACCCCCTACCCTCCCAGCA < 41bp 1 0.177235023271341 1 0.263866603374481 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HK1 ENSG00000156515 UTR3 Human protein_coding chr10:71160944 chr10:71160964 . . 0 41 hm5C_associated_SNPs_8631 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:71160938-71160966
64251 chr10 71161538 71161538 1 + T C rs5030886 71161553 + 71161533 71161573 41 TCCATTTGGATAAAAGGAACCAACCAACAAACAATGCCATC TCCATCTGGATAAAAGGAACCAACCAACAAACAATGCCATC < 41bp 1 0.399625805031009 1 0.436612129211426 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HK1 ENSG00000156515 UTR3 Human protein_coding chr10:71161553 chr10:71161538 . . 0 6 hm5C_associated_SNPs_8632 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:71161476-71161600
64251 chr10 71266923 71266923 1 + T A rs11068 71266936 + 71266916 71266956 41 CCTCCCCTAAGAGGCTTTCCCCGAGGCAGCTCTGGAATCTG CCTCCCCAAAGAGGCTTTCCCCGAGGCAGCTCTGGAATCTG < 41bp 1 0.756233576718136 1 0.725471258163452 experiment 0.487532846563727 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN15 ENSG00000099282 UTR3 Human protein_coding chr10:71266936 chr10:71266923 . . 0 8 hm5C_associated_SNPs_8633 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:71266874-71266931
64251 chr10 71266933 71266933 1 + T C rs141427786 71266936 + 71266916 71266956 41 CCTCCCCTAAGAGGCTTTCCCCGAGGCAGCTCTGGAATCTG CCTCCCCTAAGAGGCTTCCCCCGAGGCAGCTCTGGAATCTG < 41bp 1 0.674308215280151 1 0.699535012245178 experiment 0.651383569439698 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN15 ENSG00000099282 UTR3 Human protein_coding chr10:71266936 chr10:71266933 . . 0 18 hm5C_associated_SNPs_8634 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:71266924-71266956
64251 chr10 71266938 71266938 1 + G A rs373828363 71266936 + 71266916 71266956 41 CCTCCCCTAAGAGGCTTTCCCCGAGGCAGCTCTGGAATCTG CCTCCCCTAAGAGGCTTTCCCCAAGGCAGCTCTGGAATCTG < 41bp 1 0.612092989563857 1 0.749075770378113 experiment 0.775814020872285 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN15 ENSG00000099282 UTR3 Human protein_coding chr10:71266936 chr10:71266938 . . 0 23 hm5C_associated_SNPs_8635 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:71266924-71266956
64251 chr10 72637871 72637871 1 + C T rs55659308 72637861 + 72637841 72637881 41 CAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCTGGCC CAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCC < 41bp 1 0.696978044213345 1 0.586958408355713 experiment 0.60604391157331 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SGPL1 ENSG00000166224 UTR3 Human protein_coding chr10:72637861 chr10:72637871 . . 0 31 hm5C_associated_SNPs_8637 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:72637833-72637892
64251 chr10 73056484 73056484 1 + T C rs12783269 73056491 + 73056471 73056511 41 TATTCCAGCTGCATACCACTCTGGCAGAGGTGAGGGAAGTC TATTCCAGCTGCACACCACTCTGGCAGAGGTGAGGGAAGTC < 41bp 1 0.439357156415176 1 0.409312069416046 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73056491 chr10:73056484 synonymous SNV . 0 14 hm5C_associated_SNPs_8638 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:73056471-73056493
64251 chr10 73056490 73056490 1 + T A rs12783281 73056491 + 73056471 73056511 41 TATTCCAGCTGCATACCACTCTGGCAGAGGTGAGGGAAGTC TATTCCAGCTGCATACCACACTGGCAGAGGTGAGGGAAGTC < 41bp 1 0.364883821663164 1 0.0860143601894379 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73056491 chr10:73056490 synonymous SNV . 0 20 hm5C_associated_SNPs_8639 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:73056471-73056493
64251 chr10 73061284 73061284 1 + C T rs527403262 73061294 + 73061274 73061314 41 AAGTGCCCATCCCATGGGCTCGGCCTCACTGGTCACTGTTA AAGTGCCCATTCCATGGGCTCGGCCTCACTGGTCACTGTTA < 41bp 1 0.31675149298101 1 0.0802626609802246 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UNC5B ENSG00000107731 UTR3 Human protein_coding chr10:73061294 chr10:73061284 . . 0 11 hm5C_associated_SNPs_8642 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr10:73061283-73061284
64251 chr10 73724266 73724266 1 + C G rs4148907 73724251 + 73724231 73724271 41 TGGCGCCGCTTCCCTTCCAGCGTGCCGACCGGCCCCGCAGC TGGCGCCGCTTCCCTTCCAGCGTGCCGACCGGCCCGGCAGC < 41bp 1 0.222081588535861 1 0.783223628997803 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST3 ENSG00000122863 UTR5 Human protein_coding chr10:73724251 chr10:73724266 . . 0 36 hm5C_associated_SNPs_8645 4 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:73724266-73724267
64251 chr10 73992862 73992862 1 + C A rs9275 73992860 + 73992840 73992880 41 AGCAGCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTGC AGCAGCTGCTGGGATTCACCCCATCTTCAGGTTGATACTGC < 41bp 1 0.14953027577186 1 0.245775163173676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73992860 chr10:73992862 synonymous SNV . 0 23 hm5C_associated_SNPs_8649 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:73992818-73992966
64251 chr10 74034847 74034847 1 + C T rs60688331 74034859 + 74034839 74034879 41 TCTCCCTTCCTCCCTGGCTTCAGCCAGTCCCTGACGCTGAG TCTCCCTTTCTCCCTGGCTTCAGCCAGTCCCTGACGCTGAG < 41bp 1 0.457790217942231 1 0.157561391592026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034859 chr10:74034847 synonymous SNV . 0 9 hm5C_associated_SNPs_8667 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:74034743-74034873
64251 chr10 75506674 75506674 1 + T C rs2306325 75506660 + 75506640 75506680 41 AGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGG AGCCCATCTACCCAGGGTATCATCAGTCCAGCTACGGTGGG < 41bp 1 0.620361025234594 1 0.195469230413437 experiment 0.759277949530811 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75506660 chr10:75506674 synonymous SNV . 0 35 hm5C_associated_SNPs_8668 0 0 5 ALKBH5 POSTAR2 GSE38201,GSM936506 chr10:75506661-75506692
64251 chr10 75506675 75506675 1 + G A rs538595432 75506660 + 75506640 75506680 41 AGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGG AGCCCATCTACCCAGGGTATCATCAGTCCAGCTATAGTGGG < 41bp 1 0.593703942865643 1 0.33780500292778 experiment 0.812592114268714 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75506660 chr10:75506675 nonsynonymous SNV 0.655 0 36 hm5C_associated_SNPs_8669 0 0 4 ALKBH5 POSTAR2 GSE38201,GSM936506 chr10:75506661-75506692
64251 chr10 75531700 75531700 1 + T C rs144190215 75531699 + 75531679 75531719 41 AGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGC AGCTGGAGCGCCGTTCTCTCCCGCTGGGACACCGCTTGGGC < 41bp 1 0.581017337104661 1 0.363900721073151 experiment 0.837965325790679 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC24C ENSG00000176986 UTR3 Human protein_coding chr10:75531699 chr10:75531700 . . 0 22 hm5C_associated_SNPs_8670 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:75531672-75531726
64251 chr10 75557812 75557812 1 + C T rs118026121 75557805 + 75557785 75557825 41 CTGGCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTA CTGGCTCTCACGTACTTATTCTTCCCATGTTTCCTGGATTA < 41bp 1 0.10314556037784 1 0.0769293010234833 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557805 chr10:75557812 nonsynonymous SNV . 0 28 hm5C_associated_SNPs_8671 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:75557797-75557820
64251 chr10 75758085 75758085 1 + C A rs144080529 75758099 + 75758079 75758119 41 TGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCA TGACCTAACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCA < 41bp 1 0.327997139122999 1 0.183728456497192 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758099 chr10:75758085 synonymous SNV . 0 7 hm5C_associated_SNPs_8672 0 0 11 FMR1 POSTAR2 ENCODE chr10:75758034-75758132
64251 chr10 75758085 75758085 1 + C A rs144080529 75758100 + 75758080 75758120 41 GACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAG GACCTAACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAG < 41bp 1 0.775103106406005 1 0.315212070941925 experiment 0.449793787187991 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758100 chr10:75758085 synonymous SNV . 0 6 hm5C_associated_SNPs_8673 0 0 11 FMR1 POSTAR2 ENCODE chr10:75758034-75758132
64251 chr10 75758085 75758085 1 + C A rs144080529 75758102 + 75758082 75758122 41 CCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCA CCTAACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCA < 41bp 1 0.292428409272321 1 0.348948657512665 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758102 chr10:75758085 synonymous SNV . 0 4 hm5C_associated_SNPs_8674 0 0 11 FMR1 POSTAR2 ENCODE chr10:75758034-75758132
64251 chr10 75758085 75758085 1 + C A rs144080529 75758103 + 75758083 75758123 41 CTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAA CTAACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAA < 41bp 1 0.284555859331784 1 0.244079917669296 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758103 chr10:75758085 synonymous SNV . 0 3 hm5C_associated_SNPs_8675 0 0 11 FMR1 POSTAR2 ENCODE chr10:75758034-75758132
64251 chr10 75867074 75867074 1 + G C rs150385900 75867081 + 75867061 75867101 41 ACCTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTG ACCTCAGGAGCCTCACTTCCCGCCGCCTCCACCAGACCTTG < 41bp 1 0.641270551572695 1 0.145939588546753 experiment 0.717458896854611 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867081 chr10:75867074 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_8676 5 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75867074-75867093
64251 chr10 75878075 75878075 1 + A G rs528724911 75878064 + 75878044 75878084 41 CATCAGAAAGGAATGGGGGCCTCTTCAAATTAGAAGACATT CATCAGAAAGGAATGGGGGCCTCTTCAAATTGGAAGACATT < 41bp 1 0.0414113826175798 1 0.128163188695908 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCL ENSG00000035403 UTR3 Human protein_coding chr10:75878064 chr10:75878075 . . 0 32 hm5C_associated_SNPs_8677 1 0 14 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:75878023-75878101
64251 chr10 79797035 79797035 1 + A G rs139181869 79797031 + 79797011 79797051 41 AATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTG AATGAAGAAAGTCAGGGGGACTGCGAAGGCCAATGTTGGTG < 41bp 1 0.533969310008342 1 0.228733658790588 experiment 0.932061379983316 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797031 chr10:79797035 synonymous SNV . 0 25 hm5C_associated_SNPs_8678 1 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797035 79797035 1 + A G rs139181869 79797034 + 79797014 79797054 41 GAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTG GAAGAAAGTCAGGGGGACTGCGAAGGCCAATGTTGGTGCTG < 41bp 1 0.669273325843238 1 0.673746287822723 experiment 0.661453348313524 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797034 chr10:79797035 synonymous SNV . 0 22 hm5C_associated_SNPs_8679 1 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797035 79797035 1 + A G rs139181869 79797041 + 79797021 79797061 41 GTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAA GTCAGGGGGACTGCGAAGGCCAATGTTGGTGCTGGCAAAAA < 41bp 1 0.373315076857292 1 0.121356964111328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797041 chr10:79797035 synonymous SNV . 0 15 hm5C_associated_SNPs_8680 1 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797035 79797035 1 + A G rs139181869 79797052 + 79797032 79797072 41 TGCAAAGGCCAATGTTGGTGCTGGCAAAAAGGTATAGTTCA TGCGAAGGCCAATGTTGGTGCTGGCAAAAAGGTATAGTTCA < 41bp 1 0.340091059874814 1 0.210737943649292 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797052 chr10:79797035 synonymous SNV . 0 4 hm5C_associated_SNPs_8681 1 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797050 79797050 1 + T A rs151246531 79797031 + 79797011 79797051 41 AATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTG AATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGAG < 41bp 1 0.686077016812624 1 0.453272044658661 experiment 0.627845966374752 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797031 chr10:79797050 synonymous SNV . 0 40 hm5C_associated_SNPs_8682 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797050 79797050 1 + T A rs151246531 79797034 + 79797014 79797054 41 GAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTG GAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGAGCTG < 41bp 1 0.633282711776073 1 0.538677453994751 experiment 0.733434576447854 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797034 chr10:79797050 synonymous SNV . 0 37 hm5C_associated_SNPs_8683 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797050 79797050 1 + T A rs151246531 79797041 + 79797021 79797061 41 GTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAA GTCAGGGGGACTGCAAAGGCCAATGTTGGAGCTGGCAAAAA < 41bp 1 0.404256907337585 1 0.157859742641449 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797041 chr10:79797050 synonymous SNV . 0 30 hm5C_associated_SNPs_8684 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797050 79797050 1 + T A rs151246531 79797052 + 79797032 79797072 41 TGCAAAGGCCAATGTTGGTGCTGGCAAAAAGGTATAGTTCA TGCAAAGGCCAATGTTGGAGCTGGCAAAAAGGTATAGTTCA < 41bp 1 0.352120494352138 1 0.317558974027634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797052 chr10:79797050 synonymous SNV . 0 19 hm5C_associated_SNPs_8685 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797050 79797050 1 + T A rs151246531 79797056 + 79797036 79797076 41 AAGGCCAATGTTGGTGCTGGCAAAAAGGTATAGTTCATTAA AAGGCCAATGTTGGAGCTGGCAAAAAGGTATAGTTCATTAA < 41bp 1 0.537261688789225 1 0.260467231273651 experiment 0.92547662242155 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797056 chr10:79797050 synonymous SNV . 0 15 hm5C_associated_SNPs_8686 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79799975 79799975 1 + G A rs139289215 79799966 + 79799946 79799986 41 CCCGCCACTGATTCAGTGAGCTGGAGATTGGATCACAGGTA CCCGCCACTGATTCAGTGAGCTGGAGATTAGATCACAGGTA < 41bp 1 0.698286090241184 1 0.559856414794922 experiment 0.603427819517632 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 UTR3 Human protein_coding chr10:79799966 chr10:79799975 . . 0 30 hm5C_associated_SNPs_8687 1 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:79799951-79799985
64251 chr10 79799975 79799975 1 + G A rs139289215 79799981 + 79799961 79800001 41 GTGAGCTGGAGATTGGATCACAGGTATAATTCAAGCTTTTC GTGAGCTGGAGATTAGATCACAGGTATAATTCAAGCTTTTC < 41bp 1 0.481979322913641 1 0.442115902900696 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 UTR3 Human protein_coding chr10:79799981 chr10:79799975 . . 0 15 hm5C_associated_SNPs_8688 1 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:79799951-79799985
64251 chr10 80828974 80828974 1 + C T rs76908738 80828964 + 80828944 80828984 41 GCGCTCCTCCCGGCCCGAGCCTGCCCTACCCGGCGGTGGCG GCGCTCCTCCCGGCCCGAGCCTGCCCTACCTGGCGGTGGCG < 41bp 1 0.254001795288021 1 0.210050791501999 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ1 ENSG00000108175 UTR5 Human protein_coding chr10:80828964 chr10:80828974 . . 0 31 hm5C_associated_SNPs_8689 0 0 6 DDX24 POSTAR2 ENCODE chr10:80828966-80829015
64251 chr10 81074482 81074482 1 + A G rs142081906 81074474 + 81074454 81074494 41 AACAAAAAAAGCAACCAGGGCTATTTGTACAGTTGAAGGGG AACAAAAAAAGCAACCAGGGCTATTTGTGCAGTTGAAGGGG < 41bp 1 0.0443693042853525 1 0.283589869737625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81074474 chr10:81074482 . . 0 29 hm5C_associated_SNPs_8690 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr10:81074471-81074519
64251 chr10 81074649 81074649 1 + G C rs538218333 81074638 + 81074618 81074658 41 GTCTGTGGCCTGGCAAGTGGCCACGCCCTGTGTCAGACCAT GTCTGTGGCCTGGCAAGTGGCCACGCCCTGTCTCAGACCAT < 41bp 1 0.130136313127316 1 0.197983056306839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81074638 chr10:81074649 . . 0 32 hm5C_associated_SNPs_8691 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:81074649-81074650
64251 chr10 81075062 81075062 1 + C T rs117137195 81075077 + 81075057 81075097 41 GCATCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCA GCATCTGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCA < 41bp 1 0.59994690315361 1 0.441521495580673 experiment 0.80010619369278 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075077 chr10:81075062 . . 0 6 hm5C_associated_SNPs_8692 0 0 1 FUS POSTAR2 SRX029328 chr10:81075042-81075068
64251 chr10 81075062 81075062 1 + C T rs117137195 81075078 + 81075058 81075098 41 CATCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAG CATCTGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAG < 41bp 1 0.385282723607994 1 0.410506129264832 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075078 chr10:81075062 . . 0 5 hm5C_associated_SNPs_8693 0 0 1 FUS POSTAR2 SRX029328 chr10:81075042-81075068
64251 chr10 81075062 81075062 1 + C T rs117137195 81075079 + 81075059 81075099 41 ATCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGG ATCTGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGG < 41bp 1 0.539147028924613 1 0.75531131029129 experiment 0.921705942150775 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075079 chr10:81075062 . . 0 4 hm5C_associated_SNPs_8694 0 0 1 FUS POSTAR2 SRX029328 chr10:81075042-81075068
64251 chr10 81075062 81075062 1 + C T rs117137195 81075080 + 81075060 81075100 41 TCCGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGT TCTGGGGCGGGAGCAAGCCCCAGGTTGTGACAGGTGCAGGT < 41bp 1 0.628902365062178 1 0.921364426612854 experiment 0.742195269875643 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075080 chr10:81075062 . . 0 3 hm5C_associated_SNPs_8695 0 0 1 FUS POSTAR2 SRX029328 chr10:81075042-81075068
64251 chr10 81075461 81075461 1 + G A rs371929144 81075450 + 81075430 81075470 41 TCCCCCAGAGAGCTACAGGTCTGCTCCCGACGGGCCTCGGG TCCCCCAGAGAGCTACAGGTCTGCTCCCGACAGGCCTCGGG < 41bp 1 0.308258929673738 1 0.0925452709197998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ1 ENSG00000108175 UTR3 Human protein_coding chr10:81075450 chr10:81075461 . . 0 32 hm5C_associated_SNPs_8696 0 0 4 IGF2BP1 POSTAR2 ENCODE chr10:81075421-81075520
64251 chr10 81107275 81107275 1 + C G rs529951834 81107294 + 81107274 81107314 41 CCGCCCGTGTCCCGCCCGACCCGCGCCCGCGATGCTGGCGC CGGCCCGTGTCCCGCCCGACCCGCGCCCGCGATGCTGGCGC < 41bp 1 0.703742241259855 1 0.198524117469788 experiment 0.59251551748029 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPIF ENSG00000108179 UTR5 Human protein_coding chr10:81107294 chr10:81107275 . . 0 2 hm5C_associated_SNPs_8697 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:81107220-81107280
64251 chr10 81107295 81107295 1 + C G rs2233714 81107300 + 81107280 81107320 41 GTGTCCCGCCCGACCCGCGCCCGCGATGCTGGCGCTGCGCT GTGTCCCGCCCGACCGGCGCCCGCGATGCTGGCGCTGCGCT < 41bp 1 0.654334423490758 1 0.419701427221298 experiment 0.691331153018484 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIF ENSG00000108179 UTR5 Human protein_coding chr10:81107300 chr10:81107295 . . 0 16 hm5C_associated_SNPs_8698 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:81107220-81107400
64251 chr10 81107295 81107295 1 + C G rs2233714 81107303 + 81107283 81107323 41 TCCCGCCCGACCCGCGCCCGCGATGCTGGCGCTGCGCTGCG TCCCGCCCGACCGGCGCCCGCGATGCTGGCGCTGCGCTGCG < 41bp 1 0.676119860477416 1 0.392065078020096 experiment 0.647760279045167 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PPIF ENSG00000108179 UTR5 Human protein_coding chr10:81107303 chr10:81107295 . . 0 13 hm5C_associated_SNPs_8699 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:81107220-81107400
64251 chr10 81107457 81107457 1 + C G rs2233715 81107439 + 81107419 81107459 41 TCTTCCTCCTCCTCCGGGAACCCGCTCGTGTACCTGGACGT TCTTCCTCCTCCTCCGGGAACCCGCTCGTGTACCTGGAGGT < 41bp 1 0.319016777732405 1 0.128939747810364 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PPIF ENSG00000108179 CDS Human protein_coding chr10:81107439 chr10:81107457 nonsynonymous SNV 0.014 4 39 hm5C_associated_SNPs_8700 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:81107420-81107460
64251 chr10 81107457 81107457 1 + C G rs2233715 81107440 + 81107420 81107460 41 CTTCCTCCTCCTCCGGGAACCCGCTCGTGTACCTGGACGTG CTTCCTCCTCCTCCGGGAACCCGCTCGTGTACCTGGAGGTG < 41bp 1 0.338563913638501 1 0.115131437778473 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PPIF ENSG00000108179 CDS Human protein_coding chr10:81107440 chr10:81107457 nonsynonymous SNV 0.014 4 38 hm5C_associated_SNPs_8701 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:81107420-81107460
64251 chr10 81109501 81109501 1 + A G rs143055894 81109491 + 81109471 81109511 41 TCCACCTTCCACAGGGTGATCCCTTCCTTCATGTGCCAGGT TCCACCTTCCACAGGGTGATCCCTTCCTTCGTGTGCCAGGT < 41bp 1 0.081153073886785 1 0.169249534606934 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PPIF ENSG00000108179 CDS Human protein_coding chr10:81109491 chr10:81109501 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_8702 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:81109477-81109501
64251 chr10 82192125 82192125 1 + A G rs1063161 82192132 + 82192112 82192152 41 CCAGGCTGGGTGCAGTGGCTCACACCTGTAATCCCAGCACT CCAGGCTGGGTGCGGTGGCTCACACCTGTAATCCCAGCACT < 41bp 1 0.647934700015129 1 0.177910506725311 experiment 0.704130599969742 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192132 chr10:82192125 . . 0 14 hm5C_associated_SNPs_8709 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:82192097-82192137
64251 chr10 91465096 91465096 1 + T A rs114316057 91465083 + 91465063 91465103 41 TTTTAATCAAGAGGGAGTACCTCGACCATCTTATGTTTTTA TTTTAATCAAGAGGGAGTACCTCGACCATCTTAAGTTTTTA < 41bp 1 0.733132829407666 1 0.687824547290802 experiment 0.533734341184667 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91465083 chr10:91465096 stopgain 1.000 0 34 hm5C_associated_SNPs_8726 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:91465078-91465098
64251 chr10 93751991 93751991 1 + C T rs151057472 93751990 + 93751970 93752010 41 CACAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTC CACAAGTAGGCGAGGTCCTACTCCCAAAGCAGTAAAAGCTC < 41bp 1 0.379583287194945 1 0.361607432365417 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751990 chr10:93751991 synonymous SNV . 0 22 hm5C_associated_SNPs_8727 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:93751984-93752016
64251 chr10 94757362 94757362 1 + A G rs114345865 94757363 + 94757343 94757383 41 AGTTTAACTTAGATGTCATACAGTGTGAATGTAAGTACTAT AGTTTAACTTAGATGTCATGCAGTGTGAATGTAAGTACTAT < 41bp 1 0.204907041375102 1 0.150873154401779 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94757363 chr10:94757362 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_8728 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:94757357-94757377
64251 chr10 95262980 95262980 1 + C T rs62642530 95262979 + 95262959 95262999 41 GAAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGG GAAGGCCAGATATAGTACTACTACATTGCTTGAACAGCTGG < 41bp 1 0.691503456944589 1 0.82366269826889 experiment 0.616993086110823 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262979 chr10:95262980 synonymous SNV . 0 22 hm5C_associated_SNPs_8731 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262980 95262980 1 + C T rs62642530 95262982 + 95262962 95263002 41 GGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGAAG GGCCAGATATAGTACTACTACATTGCTTGAACAGCTGGAAG < 41bp 1 0.272130878132114 1 0.138934433460236 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262982 chr10:95262980 synonymous SNV . 0 19 hm5C_associated_SNPs_8732 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262981 95262981 1 + A G rs7080916 95262979 + 95262959 95262999 41 GAAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGG GAAGGCCAGATATAGTACTACCGCATTGCTTGAACAGCTGG < 41bp 1 0.551615414829586 1 0.16118460893631 experiment 0.896769170340827 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262979 chr10:95262981 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_8733 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262981 95262981 1 + A G rs7080916 95262980 + 95262960 95263000 41 AAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGA AAGGCCAGATATAGTACTACCGCATTGCTTGAACAGCTGGA < 41bp 1 0.419717359469381 1 0.146150767803192 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262980 chr10:95262981 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_8734 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262981 95262981 1 + A G rs7080916 95262982 + 95262962 95263002 41 GGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGAAG GGCCAGATATAGTACTACCGCATTGCTTGAACAGCTGGAAG < 41bp 1 0.255352599931551 1 0.18210157752037 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262982 chr10:95262981 nonsynonymous SNV 0.000 0 20 hm5C_associated_SNPs_8735 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95653784 95653784 1 + C T rs565071219 95653766 + 95653746 95653786 41 CTGGCGCCAGACGGCACCGGCCGCTGGTAGAGCGCGTGCCG CTGGCGCCAGACGGCACCGGCCGCTGGTAGAGCGCGTGTCG < 41bp 1 0.625251867975766 1 0.466934025287628 experiment 0.749496264048468 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35G1 ENSG00000176273 UTR5 Human protein_coding chr10:95653766 chr10:95653784 . . 0 39 hm5C_associated_SNPs_8736 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr10:95653769-95653786
64251 chr10 97803409 97803409 1 + G A rs151011430 97803428 + 97803408 97803448 41 CGCAGCATGAGCGGGGCCGGCGTCCGCCGCACGACGGCGGG CACAGCATGAGCGGGGCCGGCGTCCGCCGCACGACGGCGGG < 41bp 1 0.551484404354681 1 0.377803325653076 experiment 0.897031191290639 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD1-AS1 ENSG00000226688 ncRNA_intronic Human antisense chr10:97803428 chr10:97803409 . . 0 2 hm5C_associated_SNPs_8737 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:97803395-97803437
64251 chr10 99080523 99080523 1 + G C rs141543730 99080539 + 99080519 99080559 41 CAGGGTGCAGCCCAATCTGCCAGACTTAAAAAAACCATCTT CAGGCTGCAGCCCAATCTGCCAGACTTAAAAAAACCATCTT < 41bp 1 0.216947413349587 1 0.606897056102753 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAT1 ENSG00000165879 UTR3 Human protein_coding chr10:99080539 chr10:99080523 . . 0 5 hm5C_associated_SNPs_8738 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:99080515-99080553
64251 chr10 99330797 99330797 1 + G A rs556160775 99330812 + 99330792 99330832 41 GAGATGAGGCGGGTGGTGGACAGCTGGGCTGTCGTGGCAGG GAGATAAGGCGGGTGGTGGACAGCTGGGCTGTCGTGGCAGG < 41bp 1 0.752885377348704 1 0.718634366989136 experiment 0.494229245302592 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBTD1 ENSG00000165886 UTR3 Human protein_coding chr10:99330812 chr10:99330797 . . 0 6 hm5C_associated_SNPs_8739 0 0 2 FUS POSTAR2 SRX029328 chr10:99330780-99330802
64251 chr10 99473729 99473729 1 + C G rs71486131 99473712 + 99473692 99473732 41 TGCGCCTGCAGCGGCCCTTCCTGCGCAGCCCGCTGGGCGTG TGCGCCTGCAGCGGCCCTTCCTGCGCAGCCCGCTGGGGGTG < 41bp 1 0.736085113078953 1 0.685462713241577 experiment 0.527829773842093 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARVELD1 ENSG00000155254 CDS Human protein_coding chr10:99473712 chr10:99473729 synonymous SNV . 0 38 hm5C_associated_SNPs_8742 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:99473714-99473774
64251 chr10 99475468 99475468 1 + C T rs192208208 99475453 + 99475433 99475473 41 CTGTTTGAAGATTTGGGGGGCGCCTTCTCTTTCTTCCCCAG CTGTTTGAAGATTTGGGGGGCGCCTTCTCTTTCTTTCCCAG < 41bp 1 0.196321394019088 1 0.139586001634598 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARVELD1 ENSG00000155254 UTR3 Human protein_coding chr10:99475453 chr10:99475468 . . 0 36 hm5C_associated_SNPs_8743 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:99475442-99475480
64251 chr10 99496893 99496893 1 + T A rs112940454 99496911 + 99496891 99496931 41 CGTCCCGGAAGCGGCGGTGGCGGCCGCGGCGTAGGCGGAGG CGACCCGGAAGCGGCGGTGGCGGCCGCGGCGTAGGCGGAGG < 41bp 1 0.613254423825861 1 0.720927894115448 experiment 0.773491152348278 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZFYVE27 ENSG00000155256 UTR5 Human protein_coding chr10:99496911 chr10:99496893 . . 0 3 hm5C_associated_SNPs_8744 0 0 2 EFTUD2 POSTAR2 ENCODE chr10:99496888-99496927
64251 chr10 102123043 102123043 1 + G A rs560792 102123030 + 102123010 102123050 41 GACCACTCCTGTCCCTGTAGCTCAGTCATCAAAGCAGAAGT GACCACTCCTGTCCCTGTAGCTCAGTCATCAAAACAGAAGT < 41bp 1 0.48476319579345 1 0.0625534653663635 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCD ENSG00000256545 ncRNA_exonic Human other chr10:102123030 chr10:102123043 . . 0 34 hm5C_associated_SNPs_8745 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:102122946-102123056
64251 chr10 102124121 102124121 1 + C T rs560355254 102124120 + 102124100 102124140 41 CTATAAGGTGCCTCAGTTTTCCTTCTGTTAAAATGGGGATA CTATAAGGTGCCTCAGTTTTCTTTCTGTTAAAATGGGGATA < 41bp 1 0.133123743466026 1 0.116926252841949 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCD ENSG00000099194 UTR3 Human protein_coding chr10:102124120 chr10:102124121 . . 0 22 hm5C_associated_SNPs_8746 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102123958-102124409
64251 chr10 102722916 102722916 1 + G A rs927302 102722897 + 102722877 102722917 41 GTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTGG GTGACCTGTTCTCCTGAGTGCTCTAGTGTCTCCAGTTGTAG < 41bp 1 0.50194531912594 1 0.171846002340317 experiment 0.996109361748121 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLF2 ENSG00000119906 UTR3 Human protein_coding chr10:102722897 chr10:102722916 . . 0 40 hm5C_associated_SNPs_8748 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr10:102722795-102722982
64251 chr10 102762256 102762256 1 + C T rs752974 102762251 + 102762231 102762271 41 TGACACCACTGCCCTGCTTACAGGTCGCCTGCGAGGCCGCT TGACACCACTGCCCTGCTTACAGGTTGCCTGCGAGGCCGCT < 41bp 1 0.65366053654797 1 0.658779621124268 experiment 0.692678926904059 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LZTS2 ENSG00000107816 UTR5 Human protein_coding chr10:102762251 chr10:102762256 . . 0 26 hm5C_associated_SNPs_8751 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102762222-102762261
64251 chr10 102762431 102762431 1 + C T rs150691048 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCTGCCACCACG < 41bp 1 0.367202285664729 1 0.555617392063141 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762431 nonsynonymous SNV 0.523 0 32 hm5C_associated_SNPs_8752 0 0 5 DDX24 POSTAR2 ENCODE chr10:102762228-102762472
64251 chr10 102795819 102795819 1 + A T rs35361377 102795823 + 102795803 102795843 41 TTCAATGCCATTGTTAACTACTCCAACCGCAGTGGTGACAC TTCAATGCCATTGTTATCTACTCCAACCGCAGTGGTGACAC < 41bp 1 0.792104045841996 1 0.955350399017334 experiment 0.415791908316007 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SFXN3 ENSG00000107819 CDS Human protein_coding chr10:102795823 chr10:102795819 nonsynonymous SNV 0.992 4 17 hm5C_associated_SNPs_8753 0 0 1 PPIG POSTAR2 ENCODE chr10:102795819-102795852
64251 chr10 102800206 102800206 1 + C T rs184572818 102800226 + 102800206 102800246 41 CCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAAC TCCCCTCCCAAGGGACACAGCGGTAGGAATGGTGCTTAAAC < 41bp 1 0.706856026925377 1 0.419945478439331 experiment 0.586287946149247 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SFXN3 ENSG00000107819 UTR3 Human protein_coding chr10:102800226 chr10:102800206 . . 0 1 hm5C_associated_SNPs_8754 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102800190-102800256
64251 chr10 103825863 103825863 1 + G C rs200584437 103825852 + 103825832 103825872 41 TTCCTGGTGCCCACTGCCACCACCTGGCCTGGCGTGGCCCA TTCCTGGTGCCCACTGCCACCACCTGGCCTGCCGTGGCCCA < 41bp 1 0.57766115528176 1 0.692704677581787 experiment 0.844677689436481 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103825852 chr10:103825863 nonsynonymous SNV 0.705 1 32 hm5C_associated_SNPs_8758 2 0 1 DDX6 POSTAR2 ENCODE chr10:103825831-103825866
64251 chr10 103827260 103827260 1 + G A rs373272114 103827278 + 103827258 103827298 41 CCGAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCC CCAAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCC < 41bp 1 0.548843417980821 1 0.692632853984833 experiment 0.902313164038358 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827278 chr10:103827260 nonsynonymous SNV 0.641 2 3 hm5C_associated_SNPs_8759 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:103827260-103827280
64251 chr10 103908217 103908217 1 + T C rs145965846 103908226 + 103908206 103908246 41 CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCCCCA CATCCTCATCACCCAGTTCTCGAAGCCGCTCACGATCCCCA < 41bp 1 0.521592633821309 1 0.890246093273163 experiment 0.956814732357383 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908226 chr10:103908217 nonsynonymous SNV 0.990 1 12 hm5C_associated_SNPs_8760 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:103908198-103908221
64251 chr10 103917969 103917969 1 + C T rs139248308 103917963 + 103917943 103917983 41 AGCTCAGACTAAAGCCCCTCCCAAACCAGGTACTGTTTCTG AGCTCAGACTAAAGCCCCTCCCAAACTAGGTACTGTTTCTG < 41bp 1 0.224297244429916 1 0.220056593418121 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917963 chr10:103917969 nonsynonymous SNV 0.905 1 27 hm5C_associated_SNPs_8761 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:103917944-103917971
64251 chr10 103919675 103919675 1 + G A rs112050395 103919665 + 103919645 103919685 41 TTAAACAGGTCCCTACAGTTCAGTCCCCCCGCCTTCTGCTC TTAAACAGGTCCCTACAGTTCAGTCCCCCCACCTTCTGCTC < 41bp 1 0.325803223465824 1 0.0851248204708099 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919665 chr10:103919675 synonymous SNV . 0 31 hm5C_associated_SNPs_8762 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:103919658-103919683
64251 chr10 103920371 103920371 1 + C T rs544616078 103920384 + 103920364 103920404 41 AGAAAGGCTGACAGCAGCTCCAGTGAGGAAGAGAGCAGCTC AGAAAGGTTGACAGCAGCTCCAGTGAGGAAGAGAGCAGCTC < 41bp 1 0.57636922113163 1 0.198454320430756 experiment 0.847261557736741 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920384 chr10:103920371 nonsynonymous SNV 0.960 3 8 hm5C_associated_SNPs_8763 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103920330-103920445
64251 chr10 104181552 104181552 1 + G A rs200350493 104181566 + 104181546 104181586 41 GGGTCCGCAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGC GGGTCCACAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGC < 41bp 1 0.740140022163174 1 0.0995828211307526 experiment 0.519719955673652 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104181566 chr10:104181552 synonymous SNV . 0 7 hm5C_associated_SNPs_8769 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104181520-104181568
64251 chr10 104181552 104181552 1 + G A rs200350493 104181567 + 104181547 104181587 41 GGTCCGCAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGCG GGTCCACAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGCG < 41bp 1 0.582833133435706 1 0.209132492542267 experiment 0.834333733128589 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104181567 chr10:104181552 synonymous SNV . 0 6 hm5C_associated_SNPs_8770 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104181520-104181568
64251 chr10 104181578 104181578 1 + G A rs199729408 104181566 + 104181546 104181586 41 GGGTCCGCAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGC GGGTCCGCAGATCCCGCGGGCCGCATTGGCCCAGCTGCTGC < 41bp 1 0.716217997721625 1 0.202861994504929 experiment 0.567564004556751 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104181566 chr10:104181578 nonsynonymous SNV 0.533 0 33 hm5C_associated_SNPs_8771 0 0 5 DDX55 POSTAR2 ENCODE chr10:104181560-104181602
64251 chr10 104181578 104181578 1 + G A rs199729408 104181567 + 104181547 104181587 41 GGTCCGCAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGCG GGTCCGCAGATCCCGCGGGCCGCATTGGCCCAGCTGCTGCG < 41bp 1 0.571278980895608 1 0.110635757446289 experiment 0.857442038208783 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104181567 chr10:104181578 nonsynonymous SNV 0.533 0 32 hm5C_associated_SNPs_8772 0 0 5 DDX55 POSTAR2 ENCODE chr10:104181560-104181602
64251 chr10 104417173 104417173 1 + T C rs528960543 104417154 + 104417134 104417174 41 TGGGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATG TGGGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTACG < 41bp 1 0.109549828790135 1 0.0160763561725616 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM8 ENSG00000171206 UTR3 Human protein_coding chr10:104417154 chr10:104417173 . . 0 40 hm5C_associated_SNPs_8776 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:104417160-104417180
64251 chr10 104417173 104417173 1 + T C rs528960543 104417155 + 104417135 104417175 41 GGGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATGC GGGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTACGC < 41bp 1 0.319101486951515 1 0.0960110723972321 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM8 ENSG00000171206 UTR3 Human protein_coding chr10:104417155 chr10:104417173 . . 0 39 hm5C_associated_SNPs_8777 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:104417160-104417180
64251 chr10 104417173 104417173 1 + T C rs528960543 104417156 + 104417136 104417176 41 GGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATGCA GGGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTACGCA < 41bp 1 0.487110715129121 1 0.64250248670578 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM8 ENSG00000171206 UTR3 Human protein_coding chr10:104417156 chr10:104417173 . . 0 38 hm5C_associated_SNPs_8778 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:104417160-104417180
64251 chr10 104417173 104417173 1 + T C rs528960543 104417157 + 104417137 104417177 41 GGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATGCAT GGAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTACGCAT < 41bp 1 0.591082819869691 1 0.478558659553528 experiment 0.817834360260618 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM8 ENSG00000171206 UTR3 Human protein_coding chr10:104417157 chr10:104417173 . . 0 37 hm5C_associated_SNPs_8779 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:104417160-104417180
64251 chr10 104417173 104417173 1 + T C rs528960543 104417158 + 104417138 104417178 41 GAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTATGCATC GAATCTTCCTCCCCAGCCCCCGGGCTCGGGAGTTACGCATC < 41bp 1 0.652747304850106 1 0.907199561595917 experiment 0.694505390299788 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control TRIM8 ENSG00000171206 UTR3 Human protein_coding chr10:104417158 chr10:104417173 . . 0 36 hm5C_associated_SNPs_8780 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:104417160-104417180
64251 chr10 104503829 104503829 1 + C T rs112090972 104503844 + 104503824 104503864 41 GGCTCCTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTG GGCTCTTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTG < 41bp 1 0.466030277651979 1 0.0699911117553711 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WBP1L ENSG00000166272 CDS Human protein_coding chr10:104503844 chr10:104503829 synonymous SNV . 0 6 hm5C_associated_SNPs_8781 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:104503820-104503840
64251 chr10 104503829 104503829 1 + C T rs112090972 104503846 + 104503826 104503866 41 CTCCTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCC CTCTTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCC < 41bp 1 0.165421725785576 1 0.332798272371292 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control WBP1L ENSG00000166272 CDS Human protein_coding chr10:104503846 chr10:104503829 synonymous SNV . 0 4 hm5C_associated_SNPs_8782 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:104503820-104503840
64251 chr10 104503829 104503829 1 + C T rs112090972 104503847 + 104503827 104503867 41 TCCTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCCC TCTTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCCC < 41bp 1 0.612567637013385 1 0.249153912067413 experiment 0.774864725973231 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control WBP1L ENSG00000166272 CDS Human protein_coding chr10:104503847 chr10:104503829 synonymous SNV . 0 3 hm5C_associated_SNPs_8783 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:104503820-104503840
64251 chr10 104573856 104573856 1 + C A rs17115073 104573844 + 104573824 104573864 41 CAGCAAAAGACAGCTGAAAACAAGAACTTCACCGGTGGGCA CAGCAAAAGACAGCTGAAAACAAGAACTTCACAGGTGGGCA < 41bp 1 0.72383491653095 1 0.847553372383118 experiment 0.5523301669381 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WBP1L ENSG00000166272 UTR3 Human protein_coding chr10:104573844 chr10:104573856 . . 0 33 hm5C_associated_SNPs_8784 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:104573836-104573866
64251 chr10 104678350 104678350 1 + G A rs76057237 104678357 + 104678337 104678377 41 AGCGCTCGCGGCCGGGGGATCCTGCAGGCGGCTGCGGGGCG AGCGCTCGCGGCCAGGGGATCCTGCAGGCGGCTGCGGGGCG < 41bp 1 0.247640768804326 1 0.415396928787231 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104678357 chr10:104678350 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_8786 1 0 2 DDX3X POSTAR2 ENCODE chr10:104678341-104678410
64251 chr10 105184858 105184858 1 + G A rs117992169 105184840 + 105184820 105184860 41 GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTCAACGAC GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTCAACAAC < 41bp 1 0.269558907595505 1 0.0863568484783173 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105184840 chr10:105184858 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_8788 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:105184829-105184877
64251 chr10 105203006 105203006 1 + C T rs148181718 105203022 + 105203002 105203042 41 AGGTCTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCAAA AGGTTTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCAAA < 41bp 1 0.260144087242074 1 0.872816562652588 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203022 chr10:105203006 synonymous SNV . 0 5 hm5C_associated_SNPs_8789 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:105203001-105203025
64251 chr10 105203030 105203030 1 + C T rs371227965 105203022 + 105203002 105203042 41 AGGTCTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCAAA AGGTCTTTGAGCGAGCCGTGCAGTACAATGAGCCTCTCAAA < 41bp 1 0.257300389698406 1 0.804027318954468 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203022 chr10:105203030 synonymous SNV . 0 29 hm5C_associated_SNPs_8790 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:105203027-105203065
64251 chr10 108729814 108729814 1 + C T rs539244001 108729824 + 108729804 108729844 41 CGTCCGTTCTCGTCTGATCTCGGAAGCTAAGCACGGTCGGG CGTCCGTTCTTGTCTGATCTCGGAAGCTAAGCACGGTCGGG < 41bp 1 0.77890151015502 1 0.721629858016968 experiment 0.442196979689961 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SORCS1 ENSG00000200626 ncRNA_exonic Human rRNA chr10:108729824 chr10:108729814 . . 0 11 hm5C_associated_SNPs_8795 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr10:108729783-108729815
64251 chr10 108729814 108729814 1 + C T rs539244001 108729830 + 108729810 108729850 41 TTCTCGTCTGATCTCGGAAGCTAAGCACGGTCGGGCCTGGT TTCTTGTCTGATCTCGGAAGCTAAGCACGGTCGGGCCTGGT < 41bp 1 0.215050664029928 1 0.124566972255707 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SORCS1 ENSG00000200626 ncRNA_exonic Human rRNA chr10:108729830 chr10:108729814 . . 0 5 hm5C_associated_SNPs_8796 0 0 12 SSB POSTAR2 GSE95683,GSM2521599 chr10:108729783-108729815
64251 chr10 108729824 108729824 1 + C T rs10884395 108729830 + 108729810 108729850 41 TTCTCGTCTGATCTCGGAAGCTAAGCACGGTCGGGCCTGGT TTCTCGTCTGATCTTGGAAGCTAAGCACGGTCGGGCCTGGT < 41bp 1 0.220878715540105 1 0.119211614131927 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SORCS1 ENSG00000200626 ncRNA_exonic Human rRNA chr10:108729830 chr10:108729824 . . 0 15 hm5C_associated_SNPs_8797 0 0 27 METTL14 POSTAR2 GSE46705,GSM1135009 chr10:108729800-108729840
64251 chr10 112361870 112361870 1 + A G rs2419565 112361869 + 112361849 112361889 41 GTTAGATAGGGGTTACAAATCAATCATGGAACTGATGAATG GTTAGATAGGGGTTACAAATCGATCATGGAACTGATGAATG < 41bp 1 0.326963104589173 1 0.207907795906067 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361869 chr10:112361870 synonymous SNV . 0 22 hm5C_associated_SNPs_8800 2 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:112361840-112361880
64251 chr10 114711293 114711293 1 + A C rs569153544 114711291 + 114711271 114711311 41 AAGGGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC AAGGGGCCACCGTATCCCGGCTCCCCCTTCATCATGATCCC < 41bp 1 0.428348017411432 1 0.0718978345394135 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114711291 chr10:114711293 nonsynonymous SNV 0.990 2 23 hm5C_associated_SNPs_8801 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:114711281-114711298
64251 chr10 115485158 115485158 1 + C T rs537094698 115485145 + 115485125 115485165 41 TGAAGAGGACCATACAAATGCCGCCTGCTTCGCCTGCATCC TGAAGAGGACCATACAAATGCCGCCTGCTTCGCTTGCATCC < 41bp 1 0.234327236910998 1 0.250596910715103 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115485145 chr10:115485158 synonymous SNV . 0 34 hm5C_associated_SNPs_8802 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:115485151-115485169
64251 chr10 116698006 116698006 1 + C G rs183399437 116698003 + 116697983 116698023 41 CACGATGAAACAGGTCTGGGCTACAAAAGTATGGCCGCTTC CACGATGAAACAGGTCTGGGCTAGAAAAGTATGGCCGCTTC < 41bp 1 0.776943947973971 1 0.463652789592743 experiment 0.446112104052057 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TRUB1 ENSG00000165832 UTR5 Human protein_coding chr10:116698003 chr10:116698006 . . 0 24 hm5C_associated_SNPs_8808 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:116697993-116698022
64251 chr10 124923935 124923935 1 + T C rs572286922 124923943 + 124923923 124923963 41 TTTTCAATCTTATTAGGGTGCAGAAGGAAAACTAATAAGAA TTTTCAATCTTACTAGGGTGCAGAAGGAAAACTAATAAGAA < 41bp 1 0.770741125975907 1 0.598348140716553 experiment 0.458517748048186 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BUB3 ENSG00000154473 UTR3 Human protein_coding chr10:124923943 chr10:124923935 . . 0 13 hm5C_associated_SNPs_8823 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714641 chr10:124923759-124923946
64251 chr10 126150523 126150523 1 + C A rs75426652 126150526 + 126150506 126150546 41 CGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGG CGGCGCGGGCGGCGGCAAGGCCATCGCCGGCTCGGTGGAGG < 41bp 1 0.147892664755856 1 0.36604979634285 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LHPP ENSG00000107902 CDS Human protein_coding chr10:126150526 chr10:126150523 nonsynonymous SNV 0.000 0 18 hm5C_associated_SNPs_8824 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:126150501-126150540
64251 chr10 126150523 126150523 1 + C A rs75426652 126150527 + 126150507 126150547 41 GGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGC GGCGCGGGCGGCGGCAAGGCCATCGCCGGCTCGGTGGAGGC < 41bp 1 0.617817255690165 1 0.427058607339859 experiment 0.764365488619671 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LHPP ENSG00000107902 CDS Human protein_coding chr10:126150527 chr10:126150523 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_8825 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:126150501-126150540
64251 chr10 126150523 126150523 1 + C A rs75426652 126150532 + 126150512 126150552 41 GGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGG GGGCGGCGGCAAGGCCATCGCCGGCTCGGTGGAGGCGGTGG < 41bp 1 0.769970287575166 1 0.537220001220703 experiment 0.460059424849669 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LHPP ENSG00000107902 CDS Human protein_coding chr10:126150532 chr10:126150523 nonsynonymous SNV 0.000 0 12 hm5C_associated_SNPs_8826 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:126150501-126150540
64251 chr10 126150523 126150523 1 + C A rs75426652 126150533 + 126150513 126150553 41 GGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGGC GGCGGCGGCAAGGCCATCGCCGGCTCGGTGGAGGCGGTGGC < 41bp 1 0.758984473620914 1 0.463297963142395 experiment 0.482031052758173 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LHPP ENSG00000107902 CDS Human protein_coding chr10:126150533 chr10:126150523 nonsynonymous SNV 0.000 0 11 hm5C_associated_SNPs_8827 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:126150501-126150540
64251 chr10 127452102 127452102 1 + A T rs373516756 127452092 + 127452072 127452112 41 CAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTT CAGTGCCTTCAACACGGAGCCGGTTTGTTCTTTCGGTGCTT < 41bp 1 0.283955868598976 1 0.500021815299988 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EDRF1 ENSG00000107938 UTR3 Human protein_coding chr10:127452092 chr10:127452102 . . 0 31 hm5C_associated_SNPs_8829 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:127452098-127452130
64251 chr10 129141927 129141927 1 + T C rs34034225 129141910 + 129141890 129141930 41 TCCTCCTTTTTGGTTTTCAGCTGTGGAACAACTACTTTCAC TCCTCCTTTTTGGTTTTCAGCTGTGGAACAACTACTTCCAC < 41bp 1 0.128482407484147 1 0.35990247130394 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141910 chr10:129141927 synonymous SNV . 0 38 hm5C_associated_SNPs_8831 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141918 + 129141898 129141938 41 TTTGGTTTTCAGCTGTGGAACAACTACTTTCACCTGGCTGT TTTGGTTTTCAGCTGTGGAACAACTACTTCCACCTGGCTGT < 41bp 1 0.137361089441621 1 0.120416313409805 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141918 chr10:129141927 synonymous SNV . 0 30 hm5C_associated_SNPs_8832 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141921 + 129141901 129141941 41 GGTTTTCAGCTGTGGAACAACTACTTTCACCTGGCTGTTGC GGTTTTCAGCTGTGGAACAACTACTTCCACCTGGCTGTTGC < 41bp 1 0.241181129408153 1 0.0962528884410858 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141921 chr10:129141927 synonymous SNV . 0 27 hm5C_associated_SNPs_8833 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141924 + 129141904 129141944 41 TTTCAGCTGTGGAACAACTACTTTCACCTGGCTGTTGCTTT TTTCAGCTGTGGAACAACTACTTCCACCTGGCTGTTGCTTT < 41bp 1 0.0545219399403995 1 0.0779949128627777 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141924 chr10:129141927 synonymous SNV . 0 24 hm5C_associated_SNPs_8834 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141930 + 129141910 129141950 41 CTGTGGAACAACTACTTTCACCTGGCTGTTGCTTTCCTTAC CTGTGGAACAACTACTTCCACCTGGCTGTTGCTTTCCTTAC < 41bp 1 0.115162130734823 1 0.282436043024063 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141930 chr10:129141927 synonymous SNV . 0 18 hm5C_associated_SNPs_8835 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141931 + 129141911 129141951 41 TGTGGAACAACTACTTTCACCTGGCTGTTGCTTTCCTTACT TGTGGAACAACTACTTCCACCTGGCTGTTGCTTTCCTTACT < 41bp 1 0.200605790767293 1 0.445858418941498 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141931 chr10:129141927 synonymous SNV . 0 17 hm5C_associated_SNPs_8836 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141935 + 129141915 129141955 41 GAACAACTACTTTCACCTGGCTGTTGCTTTCCTTACTCAAG GAACAACTACTTCCACCTGGCTGTTGCTTTCCTTACTCAAG < 41bp 1 0.0478910148226908 1 0.086941123008728 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141935 chr10:129141927 synonymous SNV . 0 13 hm5C_associated_SNPs_8837 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141941 + 129141921 129141961 41 CTACTTTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCC CTACTTCCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCC < 41bp 1 0.0121376142114085 1 0.0784865915775299 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141941 chr10:129141927 synonymous SNV . 0 7 hm5C_associated_SNPs_8838 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141945 + 129141925 129141965 41 TTTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCA TTCCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCA < 41bp 1 0.0777435457714636 1 0.0390929579734802 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141945 chr10:129141927 synonymous SNV . 0 3 hm5C_associated_SNPs_8839 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 129141927 129141927 1 + T C rs34034225 129141946 + 129141926 129141966 41 TTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAA TCCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAA < 41bp 1 0.0761886181281068 1 0.0710353255271912 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141946 chr10:129141927 synonymous SNV . 0 2 hm5C_associated_SNPs_8840 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:129141920-129141940
64251 chr10 131978449 131978449 1 + G A rs186745175 131978465 + 131978445 131978485 41 TCTCGGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTA TCTCAGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTA < 41bp 1 0.339001199476404 1 0.0791118741035461 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLRX3 ENSG00000108010 UTR3 Human protein_coding chr10:131978465 chr10:131978449 . . 0 5 hm5C_associated_SNPs_8841 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:131978423-131978461
64251 chr10 131978449 131978449 1 + G A rs186745175 131978466 + 131978446 131978486 41 CTCGGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTAG CTCAGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTAG < 41bp 1 0.606233482510177 1 0.143074959516525 experiment 0.787533034979645 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLRX3 ENSG00000108010 UTR3 Human protein_coding chr10:131978466 chr10:131978449 . . 0 4 hm5C_associated_SNPs_8842 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:131978423-131978461
64251 chr10 131978449 131978449 1 + G A rs186745175 131978469 + 131978449 131978489 41 GGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTAGCTG AGGGCCAAGCGATCCTCCTGCCTCAGCCTTCTGAGTAGCTG < 41bp 1 0.311011768020611 1 0.0689663589000702 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLRX3 ENSG00000108010 UTR3 Human protein_coding chr10:131978469 chr10:131978449 . . 0 1 hm5C_associated_SNPs_8843 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:131978423-131978461
64251 chr10 134351388 134351388 1 + G C rs542636664 134351397 + 134351377 134351417 41 GGCGAGCGACGGGCGCGGGGCCGCGGAGCAGCGAGCGAGCG GGCGAGCGACGCGCGCGGGGCCGCGGAGCAGCGAGCGAGCG < 41bp 1 0.623022089294756 1 0.38461697101593 experiment 0.753955821410488 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient INPP5A ENSG00000068383 UTR5 Human protein_coding chr10:134351397 chr10:134351388 . . 0 12 hm5C_associated_SNPs_8844 0 0 2 DDX3X POSTAR2 ENCODE chr10:134351342-134351404
64251 chr10 134351406 134351406 1 + A C rs540258601 134351397 + 134351377 134351417 41 GGCGAGCGACGGGCGCGGGGCCGCGGAGCAGCGAGCGAGCG GGCGAGCGACGGGCGCGGGGCCGCGGAGCCGCGAGCGAGCG < 41bp 1 0.636907205710443 1 0.433436930179596 experiment 0.726185588579115 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient INPP5A ENSG00000068383 UTR5 Human protein_coding chr10:134351397 chr10:134351406 . . 0 30 hm5C_associated_SNPs_8845 0 0 1 PPIG POSTAR2 ENCODE chr10:134351343-134351420
64251 chr10 134596918 134596918 1 + G A rs372237942 134596930 + 134596910 134596950 41 TGTTGGTCGTTCTGAGGGGCCTTTGGAAGTGACCGGTCTGG TGTTGGTCATTCTGAGGGGCCTTTGGAAGTGACCGGTCTGG < 41bp 1 0.225128415313337 1 0.0266160666942596 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control INPP5A ENSG00000234531 ncRNA_exonic Human other chr10:134596930 chr10:134596918 . . 0 9 hm5C_associated_SNPs_8846 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:134596880-134596945
64251 chr10 135122507 135122507 1 + G A rs3008357 135122505 + 135122485 135122525 41 CGGGGCCCGGGGCGGCGGAGCCGCTGCCTGTAGAGCGGGAT CGGGGCCCGGGGCGGCGGAGCCACTGCCTGTAGAGCGGGAT < 41bp 1 0.355523150211584 1 0.443297833204269 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135122505 chr10:135122507 synonymous SNV . 0 23 hm5C_associated_SNPs_8848 0 0 5 DDX3X POSTAR2 ENCODE chr10:135122438-135122577
64251 chr10 135122507 135122507 1 + G A rs3008357 135122508 + 135122488 135122528 41 GGCCCGGGGCGGCGGAGCCGCTGCCTGTAGAGCGGGATCCC GGCCCGGGGCGGCGGAGCCACTGCCTGTAGAGCGGGATCCC < 41bp 1 0.791924014894196 1 0.389325499534607 experiment 0.416151970211608 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135122508 chr10:135122507 synonymous SNV . 0 20 hm5C_associated_SNPs_8849 0 0 5 DDX3X POSTAR2 ENCODE chr10:135122438-135122577
64251 chr10 135209682 135209682 1 + C T rs148997160 135209670 + 135209650 135209690 41 TACCTTAATTTTGCCACATCCCACTTTCAGGCCGCAACCCT TACCTTAATTTTGCCACATCCCACTTTCAGGCTGCAACCCT < 41bp 1 0.0854944091684175 1 0.0433690547943115 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135209670 chr10:135209682 nonsynonymous SNV 0.995 3 33 hm5C_associated_SNPs_8850 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:135209677-135209703
64251 chr10 135209689 135209689 1 + C G rs190130537 135209670 + 135209650 135209690 41 TACCTTAATTTTGCCACATCCCACTTTCAGGCCGCAACCCT TACCTTAATTTTGCCACATCCCACTTTCAGGCCGCAACCGT < 41bp 1 0.0840386890236458 1 0.0513400435447693 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135209670 chr10:135209689 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_8851 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:135209677-135209703
64251 chr10 135233541 135233541 1 + A G rs2255246 135233540 + 135233520 135233560 41 CGTCCCCCAGGTAACGTGAACATTATTCAGCCTAACTATCC CGTCCCCCAGGTAACGTGAACGTTATTCAGCCTAACTATCC < 41bp 1 0.230059690991297 1 0.0145511627197266 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135233540 chr10:135233541 nonsynonymous SNV 0.023 0 22 hm5C_associated_SNPs_8852 0 0 1 BUD13 POSTAR2 ENCODE chr10:135233527-135233543
64251 chr11 209390 209390 1 + C T rs377487596 209400 + 209380 209420 41 TGGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCT TGGAGCCGCTTTTCTCCCTGCCCACAGAGACTGGCGGAGCT < 41bp 1 0.0314167830863117 1 0.382596731185913 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MIR6743 ENSG00000177963 CDS Human protein_coding chr11:209400 chr11:209390 nonsynonymous SNV 0.016 1 11 hm5C_associated_SNPs_8853 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:209344-209408
64251 chr11 209390 209390 1 + C T rs377487596 209401 + 209381 209421 41 GGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCTG GGAGCCGCTTTTCTCCCTGCCCACAGAGACTGGCGGAGCTG < 41bp 1 0.195881752930108 1 0.290806472301483 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MIR6743 ENSG00000177963 CDS Human protein_coding chr11:209401 chr11:209390 nonsynonymous SNV 0.016 1 10 hm5C_associated_SNPs_8854 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:209344-209408
64251 chr11 209390 209390 1 + C T rs377487596 209402 + 209382 209422 41 GAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCTGC GAGCCGCTTTTCTCCCTGCCCACAGAGACTGGCGGAGCTGC < 41bp 1 0.303405899979129 1 0.523231625556946 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MIR6743 ENSG00000177963 CDS Human protein_coding chr11:209402 chr11:209390 nonsynonymous SNV 0.016 1 9 hm5C_associated_SNPs_8855 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:209344-209408
64251 chr11 289651 289651 1 + C T rs115270978 289652 + 289632 289672 41 GAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAG GAGCTCCTTTCCTGCGAGGTCCCGTCTAGGAGGGGCCTCAG < 41bp 1 0.211371169875289 1 0.825259685516357 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289652 chr11:289651 . . 0 20 hm5C_associated_SNPs_8856 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289651 289651 1 + C T rs115270978 289653 + 289633 289673 41 AGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAGG AGCTCCTTTCCTGCGAGGTCCCGTCTAGGAGGGGCCTCAGG < 41bp 1 0.0236746808074207 1 0.279941618442535 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289653 chr11:289651 . . 0 19 hm5C_associated_SNPs_8857 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289651 289651 1 + C T rs115270978 289654 + 289634 289674 41 GCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAGGA GCTCCTTTCCTGCGAGGTCCCGTCTAGGAGGGGCCTCAGGA < 41bp 1 0.138556875513645 1 0.43521773815155 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289654 chr11:289651 . . 0 18 hm5C_associated_SNPs_8858 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289651 289651 1 + C T rs115270978 289667 + 289647 289687 41 GAGGCCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGC GAGGTCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGC < 41bp 1 0.0828992162292553 1 0.0444842576980591 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289667 chr11:289651 . . 0 5 hm5C_associated_SNPs_8859 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289651 289651 1 + C T rs115270978 289668 + 289648 289688 41 AGGCCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGCC AGGTCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGCC < 41bp 1 0.204299356741949 1 0.122030943632126 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289668 chr11:289651 . . 0 4 hm5C_associated_SNPs_8860 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289651 + 289631 289671 41 CGAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCA CGAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCGTCA < 41bp 1 0.0760710590213166 1 0.0518392622470856 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289651 chr11:289668 . . 0 38 hm5C_associated_SNPs_8861 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289652 + 289632 289672 41 GAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAG GAGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCGTCAG < 41bp 1 0.165391965589765 1 0.352722883224487 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289652 chr11:289668 . . 0 37 hm5C_associated_SNPs_8862 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289653 + 289633 289673 41 AGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAGG AGCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCGTCAGG < 41bp 1 0.0216455213661843 1 0.166206777095795 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289653 chr11:289668 . . 0 36 hm5C_associated_SNPs_8863 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289654 + 289634 289674 41 GCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCCTCAGGA GCTCCTTTCCTGCGAGGCCCCGTCTAGGAGGGGCGTCAGGA < 41bp 1 0.0908591458721651 1 0.10346594452858 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289654 chr11:289668 . . 0 35 hm5C_associated_SNPs_8864 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 289668 289668 1 + C G rs112058263 289667 + 289647 289687 41 GAGGCCCCGTCTAGGAGGGGCCTCAGGAAAATCGGGGCTGC GAGGCCCCGTCTAGGAGGGGCGTCAGGAAAATCGGGGCTGC < 41bp 1 0.26855837196178 1 0.134620845317841 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PGGHG ENSG00000142102 UTR5 Human protein_coding chr11:289667 chr11:289668 . . 0 22 hm5C_associated_SNPs_8865 0 0 1 HNRNPK POSTAR2 ENCODE chr11:289430-289694
64251 chr11 295038 295038 1 + C T rs542611677 295031 + 295011 295051 41 CACGACCCCACCCCGAGCTCCTGAAGCCGGGGTCTGAGCCT CACGACCCCACCCCGAGCTCCTGAAGCTGGGGTCTGAGCCT < 41bp 1 0.617096793389062 1 0.636037826538086 experiment 0.765806413221876 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PGGHG ENSG00000142102 UTR3 Human protein_coding chr11:295031 chr11:295038 . . 0 28 hm5C_associated_SNPs_8866 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:295033-295093
64251 chr11 309127 309127 1 + A C rs1059091 309126 + 309106 309146 41 ATCTTCATGACCATTCTGCTCATCATCATCCCAGTGTTGGT ATCTTCATGACCATTCTGCTCCTCATCATCCCAGTGTTGGT < 41bp 1 0.211277396228552 1 0.0205833613872528 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFITM2 ENSG00000185201 CDS Human protein_coding chr11:309126 chr11:309127 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_8867 0 1 6 LARP4 POSTAR2 ENCODE chr11:309105-309176
64251 chr11 309261 309261 1 + C T rs147035874 309263 + 309243 309283 41 GCCCCCAGAGGCCAGGAGCTCTGCCCTTGACCTGTATTCCA GCCCCCAGAGGCCAGGAGTTCTGCCCTTGACCTGTATTCCA < 41bp 1 0.733009125855234 1 0.0899056196212769 experiment 0.533981748289531 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control IFITM2 ENSG00000185201 UTR3 Human protein_coding chr11:309263 chr11:309261 . . 0 19 hm5C_associated_SNPs_8868 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:309231-309284
64251 chr11 314323 314323 1 + T C rs12432 314324 + 314304 314344 41 TCTTCTTGAACTGGTGCTGTCTGGGCTTCATAGCATTCGCC TCTTCTTGAACTGGTGCTGCCTGGGCTTCATAGCATTCGCC < 41bp 1 0.76761548157385 1 0.136760205030441 experiment 0.4647690368523 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control IFITM1 ENSG00000185885 CDS Human protein_coding chr11:314324 chr11:314323 synonymous SNV . 0 20 hm5C_associated_SNPs_8869 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:314286-314324
64251 chr11 403980 403980 1 + G A rs11748 403978 + 403958 403998 41 GCCACCTGATCGAGAAGCTGCCGGGCAGCGTGGGTGAGAAG GCCACCTGATCGAGAAGCTGCCAGGCAGCGTGGGTGAGAAG < 41bp 1 0.181740937299285 1 0.0707011520862579 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKP3 ENSG00000184363 CDS Human protein_coding chr11:403978 chr11:403980 synonymous SNV . 0 23 hm5C_associated_SNPs_8870 0 0 2 DDX24 POSTAR2 ENCODE chr11:403979-404000
64251 chr11 403980 403980 1 + G A rs11748 403979 + 403959 403999 41 CCACCTGATCGAGAAGCTGCCGGGCAGCGTGGGTGAGAAGT CCACCTGATCGAGAAGCTGCCAGGCAGCGTGGGTGAGAAGT < 41bp 1 0.298692348536355 1 0.2673559486866 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKP3 ENSG00000184363 CDS Human protein_coding chr11:403979 chr11:403980 synonymous SNV . 0 22 hm5C_associated_SNPs_8871 0 0 2 DDX24 POSTAR2 ENCODE chr11:403979-404000
64251 chr11 450319 450319 1 + C A rs143028950 450335 + 450315 450355 41 GCTGCTCTCCTAAGACCCCGCGGGCCAGCGCCGCGACCCCT GCTGATCTCCTAAGACCCCGCGGGCCAGCGCCGCGACCCCT < 41bp 1 0.61846360642711 1 0.906279325485229 experiment 0.763072787145781 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTDSS2 ENSG00000174915 UTR5 Human protein_coding chr11:450335 chr11:450319 . . 0 5 hm5C_associated_SNPs_8872 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:450318-450347
64251 chr11 490525 490525 1 + C G rs151055800 490505 + 490485 490525 41 GCACCGTCGGCAACGGGGACCAGCACCCACTGGGGCTGGAC GCACCGTCGGCAACGGGGACCAGCACCCACTGGGGCTGGAG < 41bp 1 0.557473549966753 1 0.797078609466553 experiment 0.885052900066495 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:490505 chr11:490525 nonsynonymous SNV 0.051 0 41 hm5C_associated_SNPs_8873 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:490494-490526
64251 chr11 490812 490812 1 + G A rs373827519 490821 + 490801 490841 41 CGTGTGTACGCGCGTGTGTACACATGCGTGGCCGCCTGTGG CGTGTGTACGCACGTGTGTACACATGCGTGGCCGCCTGTGG < 41bp 1 0.515507971777271 1 0.156153589487076 experiment 0.968984056445459 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTDSS2 ENSG00000174915 UTR3 Human protein_coding chr11:490821 chr11:490812 . . 0 12 hm5C_associated_SNPs_8874 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:490785-490838
64251 chr11 490812 490812 1 + G A rs373827519 490823 + 490803 490843 41 TGTGTACGCGCGTGTGTACACATGCGTGGCCGCCTGTGGTG TGTGTACGCACGTGTGTACACATGCGTGGCCGCCTGTGGTG < 41bp 1 0.643833574338879 1 0.054560661315918 experiment 0.712332851322241 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTDSS2 ENSG00000174915 UTR3 Human protein_coding chr11:490823 chr11:490812 . . 0 10 hm5C_associated_SNPs_8875 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:490785-490838
64251 chr11 490824 490824 1 + A G rs552803629 490821 + 490801 490841 41 CGTGTGTACGCGCGTGTGTACACATGCGTGGCCGCCTGTGG CGTGTGTACGCGCGTGTGTACACGTGCGTGGCCGCCTGTGG < 41bp 1 0.778687046914754 1 0.349898397922516 experiment 0.442625906170491 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTDSS2 ENSG00000174915 UTR3 Human protein_coding chr11:490821 chr11:490824 . . 0 24 hm5C_associated_SNPs_8876 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:490785-490838
64251 chr11 490824 490824 1 + A G rs552803629 490823 + 490803 490843 41 TGTGTACGCGCGTGTGTACACATGCGTGGCCGCCTGTGGTG TGTGTACGCGCGTGTGTACACGTGCGTGGCCGCCTGTGGTG < 41bp 1 0.711533025315158 1 0.2450230717659 experiment 0.576933949369684 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTDSS2 ENSG00000174915 UTR3 Human protein_coding chr11:490823 chr11:490824 . . 0 22 hm5C_associated_SNPs_8877 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:490785-490838
64251 chr11 558318 558318 1 + G A rs569767691 558317 + 558297 558337 41 TCCTAATGTCAGGTCAGTGGCGAAGGAGGGGAGAAGGAGGG TCCTAATGTCAGGTCAGTGGCAAAGGAGGGGAGAAGGAGGG < 41bp 1 0.612550572188863 1 0.488541334867477 experiment 0.774898855622274 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control LMNTD2 ENSG00000254815 ncRNA_exonic Human antisense chr11:558317 chr11:558318 . . 0 22 hm5C_associated_SNPs_8878 0 0 1 CSTF2T POSTAR2 ENCODE chr11:558312-558375
64251 chr11 561014 561014 1 + C G rs544432445 561027 + 561007 561047 41 CGGGTCTCCAGGCTGGCGAGCGCCCAGGTGAGCCGCGCCGG CGGGTCTGCAGGCTGGCGAGCGCCCAGGTGAGCCGCGCCGG < 41bp 1 0.60362035890923 1 0.158464223146439 experiment 0.792759282181541 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RASSF7 ENSG00000099849 UTR5 Human protein_coding chr11:561027 chr11:561014 . . 0 8 hm5C_associated_SNPs_8879 0 0 2 DDX3X POSTAR2 ENCODE chr11:560981-561036
64251 chr11 561026 561026 1 + G A rs183456713 561027 + 561007 561047 41 CGGGTCTCCAGGCTGGCGAGCGCCCAGGTGAGCCGCGCCGG CGGGTCTCCAGGCTGGCGAACGCCCAGGTGAGCCGCGCCGG < 41bp 1 0.570315633585974 1 0.237150758504868 experiment 0.859368732828053 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RASSF7 ENSG00000099849 UTR5 Human protein_coding chr11:561027 chr11:561026 . . 0 20 hm5C_associated_SNPs_8880 0 0 2 DDX3X POSTAR2 ENCODE chr11:560981-561036
64251 chr11 610277 610277 1 + T C rs11246212 610293 + 610273 610313 41 CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC CAGGCGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC < 41bp 1 0.0286705506243678 1 0.0244758725166321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610293 chr11:610277 nonsynonymous SNV 0.000 0 5 hm5C_associated_SNPs_8882 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:610260-610289
64251 chr11 610300 610300 1 + A G rs201244128 610293 + 610273 610313 41 CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC CAGGTGTTCTCCGAGCTGCCCTTTCCCGGTCACGTGCTTCC < 41bp 1 0.029472978544876 1 0.0159706175327301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610293 chr11:610300 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_8883 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:610262-610300
64251 chr11 727310 727310 1 + T C rs12285459 727321 + 727301 727341 41 TGGCCCCTGTGATGCTCCCCCATCCCCACCCACTTCTACAT TGGCCCCTGCGATGCTCCCCCATCCCCACCCACTTCTACAT < 41bp 1 0.121503057957657 1 0.352604746818542 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPS8L2 ENSG00000177106 UTR3 Human protein_coding chr11:727321 chr11:727310 . . 0 10 hm5C_associated_SNPs_8885 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:727267-727314
64251 chr11 727310 727310 1 + T C rs12285459 727326 + 727306 727346 41 CCTGTGATGCTCCCCCATCCCCACCCACTTCTACATCCATC CCTGCGATGCTCCCCCATCCCCACCCACTTCTACATCCATC < 41bp 1 0.151867651608327 1 0.0846614241600037 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPS8L2 ENSG00000177106 UTR3 Human protein_coding chr11:727326 chr11:727310 . . 0 5 hm5C_associated_SNPs_8886 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:727267-727314
64251 chr11 727310 727310 1 + T C rs12285459 727329 + 727309 727349 41 GTGATGCTCCCCCATCCCCACCCACTTCTACATCCATCCAC GCGATGCTCCCCCATCCCCACCCACTTCTACATCCATCCAC < 41bp 1 0.133620733535153 1 0.0372576415538788 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPS8L2 ENSG00000177106 UTR3 Human protein_coding chr11:727329 chr11:727310 . . 0 2 hm5C_associated_SNPs_8887 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:727267-727314
64251 chr11 764957 764957 1 + T C rs537502977 764950 + 764930 764970 41 TTTACAAATTGGAGCAGGGACAGATCATAGATTTCTGATTT TTTACAAATTGGAGCAGGGACAGATCACAGATTTCTGATTT < 41bp 1 0.449174691430826 1 0.342233538627625 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764950 chr11:764957 . . 0 28 hm5C_associated_SNPs_8888 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:764848-764971
64251 chr11 764957 764957 1 + T C rs537502977 764955 + 764935 764975 41 AAATTGGAGCAGGGACAGATCATAGATTTCTGATTTTATGT AAATTGGAGCAGGGACAGATCACAGATTTCTGATTTTATGT < 41bp 1 0.57116919878005 1 0.138360530138016 experiment 0.8576616024399 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764955 chr11:764957 . . 0 23 hm5C_associated_SNPs_8889 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:764848-764971
64251 chr11 810000 810000 1 + C T rs557149339 810012 + 809992 810032 41 GTCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACG GTCGCACGTGTGAGACTTCTCCGCCGCCTCCGCCGCAGACG < 41bp 1 0.472187808429113 1 0.262076109647751 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810012 chr11:810000 . . 0 9 hm5C_associated_SNPs_8890 0 0 43 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:809960-810000
64251 chr11 810000 810000 1 + C T rs557149339 810013 + 809993 810033 41 TCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGC TCGCACGTGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGC < 41bp 1 0.689842852310438 1 0.491534322500229 experiment 0.620314295379124 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810013 chr11:810000 . . 0 8 hm5C_associated_SNPs_8891 0 0 43 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:809960-810000
64251 chr11 810000 810000 1 + C T rs557149339 810015 + 809995 810035 41 GCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCG GCACGTGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCG < 41bp 1 0.376603977804364 1 0.112392485141754 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810015 chr11:810000 . . 0 6 hm5C_associated_SNPs_8892 0 0 43 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:809960-810000
64251 chr11 810006 810006 1 + A G rs187202824 810012 + 809992 810032 41 GTCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACG GTCGCACGCGTGAGGCTTCTCCGCCGCCTCCGCCGCAGACG < 41bp 1 0.483271438480952 1 0.351424396038055 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810012 chr11:810006 . . 0 15 hm5C_associated_SNPs_8893 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810006 810006 1 + A G rs187202824 810013 + 809993 810033 41 TCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGC TCGCACGCGTGAGGCTTCTCCGCCGCCTCCGCCGCAGACGC < 41bp 1 0.722841866453609 1 0.424817740917206 experiment 0.554316267092781 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810013 chr11:810006 . . 0 14 hm5C_associated_SNPs_8894 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810006 810006 1 + A G rs187202824 810015 + 809995 810035 41 GCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCG GCACGCGTGAGGCTTCTCCGCCGCCTCCGCCGCAGACGCCG < 41bp 1 0.414175294285113 1 0.154796749353409 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810015 chr11:810006 . . 0 12 hm5C_associated_SNPs_8895 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810011 810011 1 + T C rs542687757 810012 + 809992 810032 41 GTCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACG GTCGCACGCGTGAGACTTCCCCGCCGCCTCCGCCGCAGACG < 41bp 1 0.457470865762924 1 0.254204213619232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810012 chr11:810011 . . 0 20 hm5C_associated_SNPs_8896 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810011 810011 1 + T C rs542687757 810013 + 809993 810033 41 TCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGC TCGCACGCGTGAGACTTCCCCGCCGCCTCCGCCGCAGACGC < 41bp 1 0.683324407935488 1 0.516140401363373 experiment 0.633351184129023 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810013 chr11:810011 . . 0 19 hm5C_associated_SNPs_8897 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810011 810011 1 + T C rs542687757 810015 + 809995 810035 41 GCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCG GCACGCGTGAGACTTCCCCGCCGCCTCCGCCGCAGACGCCG < 41bp 1 0.343240525234915 1 0.163224846124649 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810015 chr11:810011 . . 0 17 hm5C_associated_SNPs_8898 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:809960-810020
64251 chr11 810034 810034 1 + C T rs572844964 810015 + 809995 810035 41 GCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCG GCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCTG < 41bp 1 0.371756642178595 1 0.0986404418945312 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:810015 chr11:810034 . . 0 40 hm5C_associated_SNPs_8899 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:809973-810040
64251 chr11 823799 823799 1 + C G rs200088893 823809 + 823789 823829 41 GAGGATTACTCGCAGCTGCCCGGAGAAGATCACATCCTGGA GAGGATTACTGGCAGCTGCCCGGAGAAGATCACATCCTGGA < 41bp 1 0.516471969570342 1 0.504286348819733 experiment 0.967056060859316 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA2 ENSG00000177666 CDS Human protein_coding chr11:823809 chr11:823799 nonsynonymous SNV 0.000 2 11 hm5C_associated_SNPs_8900 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:823780-823800
64251 chr11 830662 830662 1 + G A rs556837233 830674 + 830654 830694 41 GAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGC GAGCTGGAACTGCAGAGCCGCGAGCAGGACCTGGAACGCGC < 41bp 1 0.478901800260259 1 0.448029518127441 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:830674 chr11:830662 synonymous SNV . 0 9 hm5C_associated_SNPs_8901 0 0 10 GEMIN5 POSTAR2 ENCODE chr11:830650-830681
64251 chr11 830670 830670 1 + G T rs4075289 830674 + 830654 830694 41 GAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGC GAGCTGGAGCTGCAGATCCGCGAGCAGGACCTGGAACGCGC < 41bp 1 0.621774778616136 1 0.572227716445923 experiment 0.756450442767729 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:830674 chr11:830670 nonsynonymous SNV 0.970 0 17 hm5C_associated_SNPs_8902 0 0 10 GEMIN5 POSTAR2 ENCODE chr11:830650-830681
64251 chr11 831572 831572 1 + T A rs530911961 831584 + 831564 831604 41 GGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG GGGACGCCAGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG < 41bp 1 0.649137314685425 1 0.700644195079803 experiment 0.701725370629149 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831584 chr11:831572 nonsynonymous SNV 0.389 0 9 hm5C_associated_SNPs_8903 0 0 8 BUD13 POSTAR2 ENCODE chr11:831536-831580
64251 chr11 831682 831682 1 + C T rs35336339 831668 + 831648 831688 41 GCTGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGC GCTGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGTTCTGGC < 41bp 1 0.220521553193666 1 0.227477699518204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831668 chr11:831682 synonymous SNV . 0 35 hm5C_associated_SNPs_8904 0 0 1 RBM15 POSTAR2 ENCODE chr11:831651-831695
64251 chr11 831682 831682 1 + C T rs35336339 831670 + 831650 831690 41 TGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGCCA TGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGTTCTGGCCA < 41bp 1 0.703038503432957 1 0.675055205821991 experiment 0.593922993134085 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831670 chr11:831682 synonymous SNV . 0 33 hm5C_associated_SNPs_8905 0 0 1 RBM15 POSTAR2 ENCODE chr11:831651-831695
64251 chr11 838419 838419 1 + A G rs1130678 838416 + 838396 838436 41 GGGGGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCCTG GGGGGTGTTTTGTGGGGCTCCCCGGACACACTCTCTGCCTG < 41bp 1 0.68311077645413 1 0.774200320243835 experiment 0.63377844709174 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838416 chr11:838419 . . 0 24 hm5C_associated_SNPs_8908 0 0 12 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:838400-838420
64251 chr11 838419 838419 1 + A G rs1130678 838418 + 838398 838438 41 GGGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCCTGGT GGGTGTTTTGTGGGGCTCCCCGGACACACTCTCTGCCTGGT < 41bp 1 0.551140531299193 1 0.863776624202728 experiment 0.897718937401613 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838418 chr11:838419 . . 0 22 hm5C_associated_SNPs_8909 0 0 12 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:838400-838420
64251 chr11 838424 838424 1 + C T rs1130680 838416 + 838396 838436 41 GGGGGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCCTG GGGGGTGTTTTGTGGGGCTCCCCAGACATACTCTCTGCCTG < 41bp 1 0.424322265852715 1 0.701601684093475 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838416 chr11:838424 . . 0 29 hm5C_associated_SNPs_8910 0 0 15 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:838408-838429
64251 chr11 838424 838424 1 + C T rs1130680 838417 + 838397 838437 41 GGGGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCCTGG GGGGTGTTTTGTGGGGCTCCCCAGACATACTCTCTGCCTGG < 41bp 1 0.737350941781512 1 0.704268634319305 experiment 0.525298116436976 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838417 chr11:838424 . . 0 28 hm5C_associated_SNPs_8911 0 0 15 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:838408-838429
64251 chr11 838424 838424 1 + C T rs1130680 838418 + 838398 838438 41 GGGTGTTTTGTGGGGCTCCCCAGACACACTCTCTGCCTGGT GGGTGTTTTGTGGGGCTCCCCAGACATACTCTCTGCCTGGT < 41bp 1 0.571503138149182 1 0.802523016929626 experiment 0.856993723701635 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838418 chr11:838424 . . 0 27 hm5C_associated_SNPs_8912 0 0 15 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:838408-838429
64251 chr11 838628 838628 1 + C T rs527852293 838629 + 838609 838649 41 GGCCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACA GGCCTCTGCCCCTCCCAACTCAGCCCTCGTCTCCCTCGACA < 41bp 1 0.627007842089392 1 0.771103382110596 experiment 0.745984315821216 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838629 chr11:838628 . . 0 20 hm5C_associated_SNPs_8913 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:838555-838631
64251 chr11 838634 838634 1 + C A rs8672 838629 + 838609 838649 41 GGCCTCTGCCCCTCCCAACCCAGCCCTCGTCTCCCTCGACA GGCCTCTGCCCCTCCCAACCCAGCCATCGTCTCCCTCGACA < 41bp 1 0.600861289622429 1 0.232728004455566 experiment 0.798277420755141 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838629 chr11:838634 . . 0 26 hm5C_associated_SNPs_8914 0 0 10 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:838623-838644
64251 chr11 985547 985547 1 + C G rs10794358 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCGAAGAATGCCGTGCTGTTCGAGGCCATCAGCTTA < 41bp 1 0.0684221975403321 1 0.0596843659877777 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985547 synonymous SNV . 0 23 hm5C_associated_SNPs_8915 0 0 5 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr11 3846724 3846724 1 + G A rs373030868 3846713 + 3846693 3846733 41 TTCAGTCCTGCTTGGGAGGACGCAGCCCACTGCCCAGAAAC TTCAGTCCTGCTTGGGAGGACGCAGCCCACTACCCAGAAAC < 41bp 1 0.499104555230278 1 0.558198094367981 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PGAP2 ENSG00000148985 UTR3 Human protein_coding chr11:3846713 chr11:3846724 . . 0 32 hm5C_associated_SNPs_8924 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:3846679-3846729
64251 chr11 3847360 3847360 1 + C T rs116386717 3847345 + 3847325 3847365 41 GTGGAGGTGGTGTTCTATACCTAAAGGATGACCTGCTCCAG GTGGAGGTGGTGTTCTATACCTAAAGGATGACCTGTTCCAG < 41bp 1 0.732853701341978 1 0.708333730697632 experiment 0.534292597316044 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGAP2 ENSG00000148985 UTR3 Human protein_coding chr11:3847345 chr11:3847360 . . 0 36 hm5C_associated_SNPs_8925 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:3847319-3847369
64251 chr11 4112773 4112773 1 + C G rs61743670 4112784 + 4112764 4112804 41 GCTGAGCCCCTCAGCCCCACCTGGTGGCTCTCCACATTTGG GCTGAGCCCGTCAGCCCCACCTGGTGGCTCTCCACATTTGG < 41bp 1 0.62674944523269 1 0.544995546340942 experiment 0.74650110953462 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4112784 chr11:4112773 synonymous SNV . 0 10 hm5C_associated_SNPs_8926 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:4112764-4112787
64251 chr11 4112783 4112783 1 + C G rs139432975 4112784 + 4112764 4112804 41 GCTGAGCCCCTCAGCCCCACCTGGTGGCTCTCCACATTTGG GCTGAGCCCCTCAGCCCCAGCTGGTGGCTCTCCACATTTGG < 41bp 1 0.572356844510825 1 0.36118420958519 experiment 0.855286310978351 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4112784 chr11:4112783 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_8927 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:4112764-4112787
64251 chr11 6505757 6505757 1 + G A rs150061600 6505751 + 6505731 6505771 41 GGACCTTACCCACAGGGTGGCACTCTGTCCTTGGGAAATAT GGACCTTACCCACAGGGTGGCACTCTATCCTTGGGAAATAT < 41bp 1 0.282042711509104 1 0.0934167802333832 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TIMM10B ENSG00000132286 UTR3 Human protein_coding chr11:6505751 chr11:6505757 . . 0 27 hm5C_associated_SNPs_8929 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:6505657-6505766
64251 chr11 6519407 6519407 1 + G C rs184014783 6519425 + 6519405 6519445 41 GGGCAAGGTCACTTCGACAGCAGTTGAATGCCCAGCTCCTC GGCCAAGGTCACTTCGACAGCAGTTGAATGCCCAGCTCCTC < 41bp 1 0.421991625584193 1 0.164299845695496 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNHD1 ENSG00000179532;ENSG00000265264 UTR5;UTR3 Human other chr11:6519425 chr11:6519407 . . 0 3 hm5C_associated_SNPs_8930 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:6519372-6519409
64251 chr11 8125833 8125833 1 + C T rs185654949 8125845 + 8125825 8125865 41 TCTGTAACCGCTTCTGGGGCCACACCCCAAAACTCTACACC TCTGTAACTGCTTCTGGGGCCACACCCCAAAACTCTACACC < 41bp 1 0.168228793546639 1 0.0983960330486298 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUB ENSG00000166402 UTR3 Human protein_coding chr11:8125845 chr11:8125833 . . 0 9 hm5C_associated_SNPs_8933 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:8125786-8125845
64251 chr11 8704329 8704329 1 + G A rs80106507 8704345 + 8704325 8704365 41 TGGCGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGT TGGCAAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGT < 41bp 1 0.471461563740513 1 0.544714331626892 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704345 chr11:8704329 . . 0 5 hm5C_associated_SNPs_8934 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704329 8704329 1 + G A rs80106507 8704348 + 8704328 8704368 41 CGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGG CAAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGG < 41bp 1 0.654033033765873 1 0.122867047786713 experiment 0.691933932468254 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704348 chr11:8704329 . . 0 2 hm5C_associated_SNPs_8935 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704338 8704338 1 + C A rs199764465 8704345 + 8704325 8704365 41 TGGCGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGT TGGCGAAGGCCTTACTTTTTCGTCTGGGCTGCCAACATGGT < 41bp 1 0.450557341233859 1 0.352580517530441 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704345 chr11:8704338 . . 0 14 hm5C_associated_SNPs_8936 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704338 8704338 1 + C A rs199764465 8704348 + 8704328 8704368 41 CGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGG CGAAGGCCTTACTTTTTCGTCTGGGCTGCCAACATGGTAGG < 41bp 1 0.665084088110351 1 0.207617282867432 experiment 0.669831823779299 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704348 chr11:8704338 . . 0 11 hm5C_associated_SNPs_8937 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704338 8704338 1 + C A rs199764465 8704353 + 8704333 8704373 41 GCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGGTGTTT GCCTTACTTTTTCGTCTGGGCTGCCAACATGGTAGGTGTTT < 41bp 1 0.350314785184927 1 0.0504456460475922 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704353 chr11:8704338 . . 0 6 hm5C_associated_SNPs_8938 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704338 8704338 1 + C A rs199764465 8704357 + 8704337 8704377 41 TCCTTTTTCGTCTGGGCTGCCAACATGGTAGGTGTTTCGTT TACTTTTTCGTCTGGGCTGCCAACATGGTAGGTGTTTCGTT < 41bp 1 0.592440356858196 1 0.561107754707336 experiment 0.815119286283608 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704357 chr11:8704338 . . 0 2 hm5C_associated_SNPs_8939 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8706406 8706406 1 + T G rs4670 8706393 + 8706373 8706413 41 ACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTG ACAGACACGGGTGAATGCTGCTAAAAACAAGACGGGGGCTG < 41bp 1 0.645568330562295 1 0.56515371799469 experiment 0.70886333887541 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL27A ENSG00000166441 CDS Human protein_coding chr11:8706393 chr11:8706406 synonymous SNV . 0 34 hm5C_associated_SNPs_8940 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:8706392-8706439
64251 chr11 8707011 8707011 1 + A G rs375348244 8706993 + 8706973 8707013 41 AGGCTTATGCTTTGCCGAGACTAGAGTCACATCCTGACACA AGGCTTATGCTTTGCCGAGACTAGAGTCACATCCTGACGCA < 41bp 1 0.773973517015069 1 0.545092880725861 experiment 0.452052965969863 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8706993 chr11:8707011 . . 0 39 hm5C_associated_SNPs_8941 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:8706942-8707015
64251 chr11 8707011 8707011 1 + A G rs375348244 8707005 + 8706985 8707025 41 TGCCGAGACTAGAGTCACATCCTGACACAACTCTTGTCCTG TGCCGAGACTAGAGTCACATCCTGACGCAACTCTTGTCCTG < 41bp 1 0.319807424629308 1 0.18434002995491 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707005 chr11:8707011 . . 0 27 hm5C_associated_SNPs_8942 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:8706942-8707015
64251 chr11 8707011 8707011 1 + A G rs375348244 8707006 + 8706986 8707026 41 GCCGAGACTAGAGTCACATCCTGACACAACTCTTGTCCTGG GCCGAGACTAGAGTCACATCCTGACGCAACTCTTGTCCTGG < 41bp 1 0.222980435450771 1 0.686380445957184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707006 chr11:8707011 . . 0 26 hm5C_associated_SNPs_8943 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:8706942-8707015
64251 chr11 8707011 8707011 1 + A G rs375348244 8707010 + 8706990 8707030 41 AGACTAGAGTCACATCCTGACACAACTCTTGTCCTGGTGTG AGACTAGAGTCACATCCTGACGCAACTCTTGTCCTGGTGTG < 41bp 1 0.45430713584209 1 0.738164722919464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707010 chr11:8707011 . . 0 22 hm5C_associated_SNPs_8944 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:8706942-8707015
64251 chr11 8707011 8707011 1 + A G rs375348244 8707017 + 8706997 8707037 41 AGTCACATCCTGACACAACTCTTGTCCTGGTGTGCTAGAGT AGTCACATCCTGACGCAACTCTTGTCCTGGTGTGCTAGAGT < 41bp 1 0.135408888737931 1 0.105053573846817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707017 chr11:8707011 . . 0 15 hm5C_associated_SNPs_8945 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:8706942-8707015
64251 chr11 8707082 8707082 1 + C T rs372448230 8707068 + 8707048 8707088 41 AATCTACTGGTCTTGATTCACTGGTGGGGGCAGTCGGTGCC AATCTACTGGTCTTGATTCACTGGTGGGGGCAGTTGGTGCC < 41bp 1 0.599108818024623 1 0.578932285308838 experiment 0.801782363950754 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707068 chr11:8707082 . . 0 35 hm5C_associated_SNPs_8946 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707078 + 8707058 8707098 41 TCTTGATTCACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTG TCTTGATTCACTGGTGGGGGCAGTTGGTGCCCCCGTTAGTG < 41bp 1 0.13229316768076 1 0.329607725143433 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707078 chr11:8707082 . . 0 25 hm5C_associated_SNPs_8947 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707087 + 8707067 8707107 41 ACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCA ACTGGTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCAGATCA < 41bp 1 0.125393821102345 1 0.391262710094452 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707087 chr11:8707082 . . 0 16 hm5C_associated_SNPs_8948 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707088 + 8707068 8707108 41 CTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAG CTGGTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCAGATCAG < 41bp 1 0.231565774869247 1 0.280824989080429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707088 chr11:8707082 . . 0 15 hm5C_associated_SNPs_8949 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707089 + 8707069 8707109 41 TGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGA TGGTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCAGATCAGA < 41bp 1 0.202103681203299 1 0.307676374912262 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707089 chr11:8707082 . . 0 14 hm5C_associated_SNPs_8950 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707090 + 8707070 8707110 41 GGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGAA GGTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCAGATCAGAA < 41bp 1 0.052572560565127 1 0.19342914223671 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707090 chr11:8707082 . . 0 13 hm5C_associated_SNPs_8951 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707091 + 8707071 8707111 41 GTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGAAA GTGGGGGCAGTTGGTGCCCCCGTTAGTGCCCAGATCAGAAA < 41bp 1 0.237132200853078 1 0.388334512710571 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707091 chr11:8707082 . . 0 12 hm5C_associated_SNPs_8952 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707082 8707082 1 + C T rs372448230 8707100 + 8707080 8707120 41 GTCGGTGCCCCCGTTAGTGCCCAGATCAGAAACATACATAC GTTGGTGCCCCCGTTAGTGCCCAGATCAGAAACATACATAC < 41bp 1 0.576026218577268 1 0.443482100963593 experiment 0.847947562845465 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707100 chr11:8707082 . . 0 3 hm5C_associated_SNPs_8953 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707068 + 8707048 8707088 41 AATCTACTGGTCTTGATTCACTGGTGGGGGCAGTCGGTGCC AATCTACTGGTCTTGATTCACTGGTGGGGGCAGTCAGTGCC < 41bp 1 0.592879656776188 1 0.371241688728333 experiment 0.814240686447623 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707068 chr11:8707083 . . 0 36 hm5C_associated_SNPs_8954 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707078 + 8707058 8707098 41 TCTTGATTCACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTG TCTTGATTCACTGGTGGGGGCAGTCAGTGCCCCCGTTAGTG < 41bp 1 0.0703357650653772 1 0.235172271728516 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707078 chr11:8707083 . . 0 26 hm5C_associated_SNPs_8955 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707082 + 8707062 8707102 41 GATTCACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCA GATTCACTGGTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCA < 41bp 1 0.587286032711539 1 0.904121339321136 experiment 0.825427934576922 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707082 chr11:8707083 . . 0 22 hm5C_associated_SNPs_8956 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707087 + 8707067 8707107 41 ACTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCA ACTGGTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCAGATCA < 41bp 1 0.143284557428013 1 0.459369242191315 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707087 chr11:8707083 . . 0 17 hm5C_associated_SNPs_8957 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707088 + 8707068 8707108 41 CTGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAG CTGGTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCAGATCAG < 41bp 1 0.226874449609968 1 0.36346709728241 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707088 chr11:8707083 . . 0 16 hm5C_associated_SNPs_8958 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707089 + 8707069 8707109 41 TGGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGA TGGTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCAGATCAGA < 41bp 1 0.212917952823427 1 0.375260233879089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707089 chr11:8707083 . . 0 15 hm5C_associated_SNPs_8959 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707090 + 8707070 8707110 41 GGTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGAA GGTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCAGATCAGAA < 41bp 1 0.0439423964282576 1 0.221392750740051 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707090 chr11:8707083 . . 0 14 hm5C_associated_SNPs_8960 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707091 + 8707071 8707111 41 GTGGGGGCAGTCGGTGCCCCCGTTAGTGCCCAGATCAGAAA GTGGGGGCAGTCAGTGCCCCCGTTAGTGCCCAGATCAGAAA < 41bp 1 0.213030074183513 1 0.211630165576935 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707091 chr11:8707083 . . 0 13 hm5C_associated_SNPs_8961 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707083 8707083 1 + G A rs2073686 8707100 + 8707080 8707120 41 GTCGGTGCCCCCGTTAGTGCCCAGATCAGAAACATACATAC GTCAGTGCCCCCGTTAGTGCCCAGATCAGAAACATACATAC < 41bp 1 0.50751131148838 1 0.358365535736084 experiment 0.984977377023241 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA3B ENSG00000212607 ncRNA_exonic Human snoRNA chr11:8707100 chr11:8707083 . . 0 4 hm5C_associated_SNPs_8962 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:8706980-8707100
64251 chr11 8707853 8707853 1 + A C rs367695563 8707833 + 8707813 8707853 41 TCTCTTGCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCA TCTCTTGCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCC < 41bp 1 0.680077538458475 1 0.805017292499542 experiment 0.63984492308305 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8707833 chr11:8707853 . . 0 41 hm5C_associated_SNPs_8963 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:8707837-8707879
64251 chr11 8707853 8707853 1 + A C rs367695563 8707841 + 8707821 8707861 41 CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAGCC CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCCCTGCAGCC < 41bp 1 0.204586784061584 1 0.275211840867996 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8707841 chr11:8707853 . . 0 33 hm5C_associated_SNPs_8964 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:8707837-8707879
64251 chr11 8707853 8707853 1 + A C rs367695563 8707850 + 8707830 8707870 41 GTGCAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCC GTGCAGTGGCACGATCTCGGCTCCCTGCAGCCTCCGCCTCC < 41bp 1 0.435613054756388 1 0.113445967435837 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8707850 chr11:8707853 . . 0 24 hm5C_associated_SNPs_8965 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:8707837-8707879
64251 chr11 8707853 8707853 1 + A C rs367695563 8707852 + 8707832 8707872 41 GCAGTGGCACGATCTCGGCTCACTGCAGCCTCCGCCTCCCA GCAGTGGCACGATCTCGGCTCCCTGCAGCCTCCGCCTCCCA < 41bp 1 0.164917279519957 1 0.0175731182098389 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8707852 chr11:8707853 . . 0 22 hm5C_associated_SNPs_8966 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:8707837-8707879
64251 chr11 8941215 8941215 1 + A G rs4910157 8941225 + 8941205 8941245 41 AGACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCG AGACAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCG < 41bp 1 0.403394128012853 1 0.30461174249649 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKIP1 ENSG00000166452 UTR3 Human protein_coding chr11:8941225 chr11:8941215 . . 0 11 hm5C_associated_SNPs_8967 0 1 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr11:8941190-8941217
64251 chr11 8941215 8941215 1 + A G rs4910157 8941226 + 8941206 8941246 41 GACAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCGT GACAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCGT < 41bp 1 0.396635148203866 1 0.719988942146301 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKIP1 ENSG00000166452 UTR3 Human protein_coding chr11:8941226 chr11:8941215 . . 0 10 hm5C_associated_SNPs_8968 0 1 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr11:8941190-8941217
64251 chr11 9406216 9406216 1 + C A rs17554046 9406215 + 9406195 9406235 41 CTTTCCTTTCGCGCCGGTTGCCGCTGCGGAGCGCGGCGGGT CTTTCCTTTCGCGCCGGTTGCAGCTGCGGAGCGCGGCGGGT < 41bp 1 0.708222596955507 1 0.351032018661499 experiment 0.583554806088986 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO7 ENSG00000205339 UTR5 Human protein_coding chr11:9406215 chr11:9406216 . . 0 22 hm5C_associated_SNPs_8974 0 0 21 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:9406180-9406220
64251 chr11 9406234 9406234 1 + G A rs188545367 9406215 + 9406195 9406235 41 CTTTCCTTTCGCGCCGGTTGCCGCTGCGGAGCGCGGCGGGT CTTTCCTTTCGCGCCGGTTGCCGCTGCGGAGCGCGGCGGAT < 41bp 1 0.501483967871657 1 0.192061573266983 experiment 0.997032064256685 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO7 ENSG00000205339 UTR5 Human protein_coding chr11:9406215 chr11:9406234 . . 0 40 hm5C_associated_SNPs_8975 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr11:9406225-9406247
64251 chr11 9450327 9450327 1 + T A rs115665601 9450318 + 9450298 9450338 41 TAATGTAAATCTTTACATGGCTGCTGTAATGTGTGCATAGG TAATGTAAATCTTTACATGGCTGCTGTAAAGTGTGCATAGG < 41bp 1 0.121967093501014 1 0.0564581155776978 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450318 chr11:9450327 . . 0 30 hm5C_associated_SNPs_8976 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:9450312-9450337
64251 chr11 9450327 9450327 1 + T A rs115665601 9450345 + 9450325 9450365 41 AATGTGTGCATAGGTTTCATCTGTGTCTGGTAGCAGTGTCT AAAGTGTGCATAGGTTTCATCTGTGTCTGGTAGCAGTGTCT < 41bp 1 0.101719159034742 1 0.393026471138 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450345 chr11:9450327 . . 0 3 hm5C_associated_SNPs_8977 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:9450312-9450337
64251 chr11 9450377 9450377 1 + T G rs2290423 9450358 + 9450338 9450378 41 GTTTCATCTGTGTCTGGTAGCAGTGTCTGTCTGTGTTTTTC GTTTCATCTGTGTCTGGTAGCAGTGTCTGTCTGTGTTTTGC < 41bp 1 0.16061987434005 1 0.326037287712097 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450358 chr11:9450377 . . 0 40 hm5C_associated_SNPs_8978 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9450377 9450377 1 + T G rs2290423 9450364 + 9450344 9450384 41 TCTGTGTCTGGTAGCAGTGTCTGTCTGTGTTTTTCATTCAG TCTGTGTCTGGTAGCAGTGTCTGTCTGTGTTTTGCATTCAG < 41bp 1 0.0662625049210205 1 0.154646307229996 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450364 chr11:9450377 . . 0 34 hm5C_associated_SNPs_8979 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9450377 9450377 1 + T G rs2290423 9450378 + 9450358 9450398 41 CAGTGTCTGTCTGTGTTTTTCATTCAGATCTTGCTATCCAC CAGTGTCTGTCTGTGTTTTGCATTCAGATCTTGCTATCCAC < 41bp 1 0.0406991547419373 1 0.0544078350067139 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450378 chr11:9450377 . . 0 20 hm5C_associated_SNPs_8980 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9450377 9450377 1 + T G rs2290423 9450382 + 9450362 9450402 41 GTCTGTCTGTGTTTTTCATTCAGATCTTGCTATCCACACAA GTCTGTCTGTGTTTTGCATTCAGATCTTGCTATCCACACAA < 41bp 1 0.244300043438865 1 0.512649893760681 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450382 chr11:9450377 . . 0 16 hm5C_associated_SNPs_8981 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9450377 9450377 1 + T G rs2290423 9450395 + 9450375 9450415 41 TTTCATTCAGATCTTGCTATCCACACAAACATCATGCGGCC TTGCATTCAGATCTTGCTATCCACACAAACATCATGCGGCC < 41bp 1 0.257992158263599 1 0.0410154759883881 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450395 chr11:9450377 . . 0 3 hm5C_associated_SNPs_8982 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9450377 9450377 1 + T G rs2290423 9450396 + 9450376 9450416 41 TTCATTCAGATCTTGCTATCCACACAAACATCATGCGGCCA TGCATTCAGATCTTGCTATCCACACAAACATCATGCGGCCA < 41bp 1 0.15681403889929 1 0.0500051081180573 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA23 ENSG00000201998 ncRNA_exonic Human snoRNA chr11:9450396 chr11:9450377 . . 0 2 hm5C_associated_SNPs_8983 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:9450340-9450400
64251 chr11 9462003 9462003 1 + G A rs61729812 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGAAGAACTGGGGAGTGATGAAGATGAT < 41bp 1 0.664809162155945 1 0.525290846824646 experiment 0.670381675688109 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462003 synonymous SNV . 0 17 hm5C_associated_SNPs_8984 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr11 9595749 9595749 1 + A G rs578111142 9595767 + 9595747 9595787 41 GGAGGAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCGG GGGGGAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCGG < 41bp 1 0.796926521798891 1 0.725075721740723 experiment 0.406146956402218 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9595767 chr11:9595749 nonsynonymous SNV 0.989 1 3 hm5C_associated_SNPs_8985 0 0 1 BUD13 POSTAR2 ENCODE chr11:9595742-9595799
64251 chr11 9595768 9595768 1 + C T rs117347074 9595766 + 9595746 9595786 41 TGGAGGAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCG TGGAGGAGGACCTGTTGCTGCCTGGCGCCTGCCCGGGCGCG < 41bp 1 0.739527071646391 1 0.562890231609344 experiment 0.520945856707218 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9595766 chr11:9595768 synonymous SNV . 0 23 hm5C_associated_SNPs_8986 0 0 6 BUD13 POSTAR2 ENCODE chr11:9595742-9595799
64251 chr11 9595772 9595772 1 + G A rs201792218 9595767 + 9595747 9595787 41 GGAGGAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCGG GGAGGAGGACCTGTTGCTGCCCGGCACCTGCCCGGGCGCGG < 41bp 1 0.727765840677623 1 0.525414168834686 experiment 0.544468318644755 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9595767 chr11:9595772 nonsynonymous SNV 0.276 0 26 hm5C_associated_SNPs_8987 0 0 6 BUD13 POSTAR2 ENCODE chr11:9595742-9595799
64251 chr11 9595772 9595772 1 + G A rs201792218 9595771 + 9595751 9595791 41 GAGGACCTGTTGCTGCCCGGCGCCTGCCCGGGCGCGGACGA GAGGACCTGTTGCTGCCCGGCACCTGCCCGGGCGCGGACGA < 41bp 1 0.744583584014465 1 0.133174926042557 experiment 0.510832831971071 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9595771 chr11:9595772 nonsynonymous SNV 0.276 0 22 hm5C_associated_SNPs_8988 0 0 6 BUD13 POSTAR2 ENCODE chr11:9595742-9595799
64251 chr11 9801451 9801451 1 - G A rs3829252 9801434 - 9801414 9801454 41 ATGCTTCCATGGTCCGTGCTCTGCCAGTGGGGTTCACAACA ATGTTTCCATGGTCCGTGCTCTGCCAGTGGGGTTCACAACA < 41bp 1 0.226801438150044 1 0.136349231004715 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SBF2-AS1 ENSG00000246273 ncRNA_exonic Human antisense chr11:9801434 chr11:9801451 . . 0 4 hm5C_associated_SNPs_8989 1 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:9801431-9801453
64251 chr11 10783514 10783514 1 + T C rs116362368 10783524 + 10783504 10783544 41 TTAAAAATGGTGTCCAGCTTCTTTCCAGAGCCTATACTATT TTAAAAATGGCGTCCAGCTTCTTTCCAGAGCCTATACTATT < 41bp 1 0.0382834813103294 1 0.064091682434082 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CTR9 ENSG00000198730 CDS Human protein_coding chr11:10783524 chr11:10783514 synonymous SNV . 0 11 hm5C_associated_SNPs_8990 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10783510-10783545
64251 chr11 12281427 12281427 1 + T C rs1027335 12281442 + 12281422 12281462 41 CACCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT CACCCCGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT < 41bp 1 0.621157881172017 1 0.129980742931366 experiment 0.757684237655966 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12281442 chr11:12281427 nonsynonymous SNV 0.062 0 6 hm5C_associated_SNPs_8992 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:12281414-12281444
64251 chr11 12281438 12281438 1 + C T rs35518829 12281442 + 12281422 12281462 41 CACCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT CACCCTGGAAGGCAGCTCCCCAGGTATCTCCACCTCCTTCT < 41bp 1 0.69362986172459 1 0.246012181043625 experiment 0.612740276550821 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12281442 chr11:12281438 nonsynonymous SNV 0.993 0 17 hm5C_associated_SNPs_8993 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:12281414-12281444
64251 chr11 12960082 12960082 1 + T C rs16911828 12960096 + 12960076 12960116 41 TGTGTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCA TGTGTCCGTAGACTTAGATACATCCTCTTGAAGCACATCCA < 41bp 1 0.052839927359674 1 0.0349018573760986 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TEAD1 ENSG00000187079 UTR3 Human protein_coding chr11:12960096 chr11:12960082 . . 0 7 hm5C_associated_SNPs_8994 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:12960060-12960100
64251 chr11 12960082 12960082 1 + T C rs16911828 12960099 + 12960079 12960119 41 GTCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTT GTCCGTAGACTTAGATACATCCTCTTGAAGCACATCCATTT < 41bp 1 0.055271030518557 1 0.014893114566803 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TEAD1 ENSG00000187079 UTR3 Human protein_coding chr11:12960099 chr11:12960082 . . 0 4 hm5C_associated_SNPs_8995 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:12960060-12960100
64251 chr11 12960082 12960082 1 + T C rs16911828 12960100 + 12960080 12960120 41 TCTGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC TCCGTAGACTTAGATACATCCTCTTGAAGCACATCCATTTC < 41bp 1 0.12432057927974 1 0.034503161907196 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TEAD1 ENSG00000187079 UTR3 Human protein_coding chr11:12960100 chr11:12960082 . . 0 3 hm5C_associated_SNPs_8996 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:12960060-12960100
64251 chr11 17373464 17373464 1 + C A rs72865007 17373472 + 17373452 17373492 41 CTTGGTTTCTACCGGGCCGCCTGCTCCCACTCGGCGAAAAA CTTGGTTTCTACAGGGCCGCCTGCTCCCACTCGGCGAAAAA < 41bp 1 0.309283585294804 1 0.0844747722148895 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NCR3LG1 ENSG00000188211 UTR5 Human protein_coding chr11:17373472 chr11:17373464 . . 0 13 hm5C_associated_SNPs_9001 0 0 2 NCBP2 POSTAR2 ENCODE chr11:17373317-17373468
64251 chr11 17393588 17393588 1 + C G rs565899443 17393604 + 17393584 17393624 41 CTCTCAAGTGCATTCTGAAACACTGGAACTCCTTTGACACT CTCTGAAGTGCATTCTGAAACACTGGAACTCCTTTGACACT < 41bp 1 0.339127134889763 1 0.091413676738739 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393604 chr11:17393588 synonymous SNV . 0 5 hm5C_associated_SNPs_9002 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:17393557-17393590
64251 chr11 19173749 19173749 1 + A G rs202012922 19173768 + 19173748 19173788 41 AATGTGGTTGATAAAATACACCAAAACACTCCACTTCACTG AGTGTGGTTGATAAAATACACCAAAACACTCCACTTCACTG < 41bp 1 0.456954827861486 1 0.0830844044685364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19173768 chr11:19173749 nonsynonymous SNV 0.996 0 2 hm5C_associated_SNPs_9003 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:19173740-19173760
64251 chr11 20139705 20139705 1 + G A rs552719410 20139725 + 20139705 20139745 41 GGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT AGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT < 41bp 1 0.057441674510779 1 0.437919020652771 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control NAV2 ENSG00000166833 CDS Human protein_coding chr11:20139725 chr11:20139705 synonymous SNV . 0 1 hm5C_associated_SNPs_9007 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:20139693-20139722
64251 chr11 31392362 31392362 1 + A G rs111299050 31392369 + 31392349 31392389 41 AGACCCATCTGCAAATATATCAGACCTAAAACAAAAATATC AGACCCATCTGCAGATATATCAGACCTAAAACAAAAATATC < 41bp 1 0.372017127336247 1 0.315642327070236 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC24 ENSG00000170946 CDS Human protein_coding chr11:31392369 chr11:31392362 nonsynonymous SNV 0.944 0 14 hm5C_associated_SNPs_9010 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:31392360-31392380
64251 chr11 32118697 32118697 1 + G A rs201000684 32118684 + 32118664 32118704 41 TCTTTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATCG TCTTTTTTTTTTTTTTTGTACTGCAGGAAGATTATTGATCG < 41bp 1 0.539817297943815 1 0.351494699716568 experiment 0.92036540411237 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCN1 ENSG00000049449 CDS Human protein_coding chr11:32118684 chr11:32118697 nonsynonymous SNV 0.981 2 34 hm5C_associated_SNPs_9013 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:32118687-32118711
64251 chr11 32118697 32118697 1 + G A rs201000684 32118687 + 32118667 32118707 41 TTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATCGAAT TTTTTTTTTTTTTTGTACTGCAGGAAGATTATTGATCGAAT < 41bp 1 0.555574110033017 1 0.398691177368164 experiment 0.888851779933965 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCN1 ENSG00000049449 CDS Human protein_coding chr11:32118687 chr11:32118697 nonsynonymous SNV 0.981 2 31 hm5C_associated_SNPs_9014 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:32118687-32118711
64251 chr11 32605365 32605365 1 + C A rs183375892 32605383 + 32605363 32605403 41 CGCGGCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAG CGAGGCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAG < 41bp 1 0.689873293470147 1 0.87959611415863 experiment 0.620253413059705 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF3M ENSG00000149100 UTR5 Human protein_coding chr11:32605383 chr11:32605365 . . 0 3 hm5C_associated_SNPs_9015 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32605354-32605434
64251 chr11 32605400 32605400 1 + C A rs113415019 32605383 + 32605363 32605403 41 CGCGGCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAG CGCGGCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGAGAG < 41bp 1 0.658802073592996 1 0.835012197494507 experiment 0.682395852814008 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF3M ENSG00000149100 UTR5 Human protein_coding chr11:32605383 chr11:32605400 . . 0 38 hm5C_associated_SNPs_9016 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32605354-32605434
64251 chr11 32605400 32605400 1 + C A rs113415019 32605387 + 32605367 32605407 41 GCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGCGAGTGGA GCCCAGTTCCCTTTTCCGGTCGGCGTGGTCTTGAGAGTGGA < 41bp 1 0.758100250415696 1 0.426477134227753 experiment 0.483799499168609 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF3M ENSG00000149100 UTR5 Human protein_coding chr11:32605387 chr11:32605400 . . 0 34 hm5C_associated_SNPs_9017 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32605354-32605434
64251 chr11 32953904 32953904 1 + T C rs186308329 32953900 + 32953880 32953920 41 AGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAG AGTCATCTTTATCCTGTAGCCCAACTGGAGATTCCACTCAG < 41bp 1 0.18279809189415 1 0.243668258190155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953900 chr11:32953904 nonsynonymous SNV 0.574 1 25 hm5C_associated_SNPs_9020 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr11 32953904 32953904 1 + T C rs186308329 32953901 + 32953881 32953921 41 GTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGG GTCATCTTTATCCTGTAGCCCAACTGGAGATTCCACTCAGG < 41bp 1 0.216392358796313 1 0.292880475521088 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953901 chr11:32953904 nonsynonymous SNV 0.574 1 24 hm5C_associated_SNPs_9021 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr11 34073265 34073265 1 + C T rs143034568 34073255 + 34073235 34073275 41 GGCTGCTGGCTGGCTAAGTCCCTCCCGCTCCCGGCTCTCGC GGCTGCTGGCTGGCTAAGTCCCTCCCGCTCTCGGCTCTCGC < 41bp 1 0.0806406898181267 1 0.140176951885223 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPRIN1 ENSG00000135387 UTR5 Human protein_coding chr11:34073255 chr11:34073265 . . 0 31 hm5C_associated_SNPs_9031 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:34073260-34073300
64251 chr11 34121461 34121461 1 + T C rs114947458 34121453 + 34121433 34121473 41 AATTATGCATGGGTCCTAATCACACATATAAGGCTGGCTAC AATTATGCATGGGTCCTAATCACACATACAAGGCTGGCTAC < 41bp 1 0.632982433673223 1 0.738436639308929 experiment 0.734035132653555 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121453 chr11:34121461 . . 0 29 hm5C_associated_SNPs_9032 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:34121445-34121477
64251 chr11 34121463 34121463 1 + A G rs141360049 34121453 + 34121433 34121473 41 AATTATGCATGGGTCCTAATCACACATATAAGGCTGGCTAC AATTATGCATGGGTCCTAATCACACATATAGGGCTGGCTAC < 41bp 1 0.568211398454901 1 0.369187593460083 experiment 0.863577203090198 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPRIN1 ENSG00000135387 UTR3 Human protein_coding chr11:34121453 chr11:34121463 . . 0 31 hm5C_associated_SNPs_9033 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:34121445-34121477
64251 chr11 34938180 34938180 1 + C A rs201033364 34938184 + 34938164 34938204 41 CAGGCTGTGCTGCGGGCAGCCAGTGAGAAGGCCGTCAAGAT CAGGCTGTGCTGCGGGAAGCCAGTGAGAAGGCCGTCAAGAT < 41bp 1 0.729288016453271 1 0.573561251163483 experiment 0.541423967093458 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDHX ENSG00000110435 UTR5 Human protein_coding chr11:34938184 chr11:34938180 . . 0 17 hm5C_associated_SNPs_9035 2 0 1 DDX3X POSTAR2 ENCODE chr11:34938178-34938244
64251 chr11 34938199 34938199 1 + C A rs3818401 34938184 + 34938164 34938204 41 CAGGCTGTGCTGCGGGCAGCCAGTGAGAAGGCCGTCAAGAT CAGGCTGTGCTGCGGGCAGCCAGTGAGAAGGCCGTAAAGAT < 41bp 1 0.698204240988063 1 0.737578511238098 experiment 0.603591518023874 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDHX ENSG00000110435 UTR5 Human protein_coding chr11:34938184 chr11:34938199 . . 0 36 hm5C_associated_SNPs_9036 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:34938199-34938200
64251 chr11 34969150 34969150 1 + C T rs34582941 34969143 + 34969123 34969163 41 AAGTGATGATGGAATCTTGGCCAAAATCGTGGTAAGTTTTT AAGTGATGATGGAATCTTGGCCAAAATTGTGGTAAGTTTTT < 41bp 1 0.151676784901677 1 0.186306208372116 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969143 chr11:34969150 synonymous SNV . 0 28 hm5C_associated_SNPs_9037 2 0 2 PRPF8 POSTAR2 ENCODE chr11:34969140-34969179
64251 chr11 35684631 35684631 1 + C G rs112136832 35684620 + 35684600 35684640 41 CGCGGAAGGAAGGCGGCGAGCCCCGGGGCCCCGAGGCCTTG CGCGGAAGGAAGGCGGCGAGCCCCGGGGCCCGGAGGCCTTG < 41bp 1 0.736053134456385 1 0.216439813375473 experiment 0.527893731087229 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TRIM44 ENSG00000166326 UTR5 Human protein_coding chr11:35684620 chr11:35684631 . . 0 32 hm5C_associated_SNPs_9038 0 0 10 AARS POSTAR2 ENCODE chr11:35684607-35684658
64251 chr11 35684631 35684631 1 + C G rs112136832 35684621 + 35684601 35684641 41 GCGGAAGGAAGGCGGCGAGCCCCGGGGCCCCGAGGCCTTGG GCGGAAGGAAGGCGGCGAGCCCCGGGGCCCGGAGGCCTTGG < 41bp 1 0.778239426817929 1 0.732564449310303 experiment 0.443521146364141 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control TRIM44 ENSG00000166326 UTR5 Human protein_coding chr11:35684621 chr11:35684631 . . 0 31 hm5C_associated_SNPs_9039 0 0 10 AARS POSTAR2 ENCODE chr11:35684607-35684658
64251 chr11 35828455 35828455 1 + C T rs182988466 35828454 + 35828434 35828474 41 CATTTGTGAAAATTGTGGTGCCATGAATTAAGATGGATGAC CATTTGTGAAAATTGTGGTGCTATGAATTAAGATGGATGAC < 41bp 1 0.138426642744543 1 0.0937677919864655 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM44 ENSG00000166326 UTR3 Human protein_coding chr11:35828454 chr11:35828455 . . 0 22 hm5C_associated_SNPs_9040 0 0 10 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:35828422-35828460
64251 chr11 43413479 43413479 1 + C T rs137942695 43413476 + 43413456 43413496 41 GGAGTATAGATGACATAGGTCACCTCATTCATGAAGGCCTA GGAGTATAGATGACATAGGTCACTTCATTCATGAAGGCCTA < 41bp 1 0.162461547545241 1 0.0401407480239868 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTC17 ENSG00000052841 CDS Human protein_coding chr11:43413476 chr11:43413479 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_9043 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:43413441-43413479
64251 chr11 43465659 43465659 1 + T C rs76342567 43465648 + 43465628 43465668 41 TAAAGAAACCCAAAGGAGATCATAAGAAAACTCCTGGGAAA TAAAGAAACCCAAAGGAGATCATAAGAAAACCCCTGGGAAA < 41bp 1 0.380680691133159 1 0.319040656089783 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43465648 chr11:43465659 synonymous SNV . 0 32 hm5C_associated_SNPs_9044 0 0 5 GRWD1 POSTAR2 ENCODE chr11:43465604-43465669
64251 chr11 43876829 43876829 1 + A G rs11037684 43876844 + 43876824 43876864 41 GCCAGATGCTCCAGCATATGCACGTTCACTGCAAAGCACCC GCCAGGTGCTCCAGCATATGCACGTTCACTGCAAAGCACCC < 41bp 1 0.768083186260188 1 0.0899722576141357 experiment 0.463833627479624 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43876844 chr11:43876829 . . 0 6 hm5C_associated_SNPs_9045 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:43876726-43876841
64251 chr11 43876829 43876829 1 + A G rs11037684 43876846 + 43876826 43876866 41 CAGATGCTCCAGCATATGCACGTTCACTGCAAAGCACCCTA CAGGTGCTCCAGCATATGCACGTTCACTGCAAAGCACCCTA < 41bp 1 0.107658175574866 1 0.0472550392150879 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43876846 chr11:43876829 . . 0 4 hm5C_associated_SNPs_9046 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:43876726-43876841
64251 chr11 43902620 43902620 1 + G A rs12799548 43902631 + 43902611 43902651 41 AAAGGAAGTGCCCTTATCCACGACCAAGCTCTTCCACCTGC AAAGGAAGTACCCTTATCCACGACCAAGCTCTTCCACCTGC < 41bp 1 0.420942085010278 1 0.0432881414890289 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALKBH3 ENSG00000166199 UTR5 Human protein_coding chr11:43902631 chr11:43902620 . . 0 10 hm5C_associated_SNPs_9047 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:43902609-43902632
64251 chr11 43941637 43941637 1 + C G rs36088299 43941621 + 43941601 43941641 41 AACCTTCCACTGAGAAGCCACTTCAAGAGGCTGGTGCTGCT AACCTTCCACTGAGAAGCCACTTCAAGAGGCTGGTGGTGCT < 41bp 1 0.376154537477593 1 0.81612503528595 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALKBH3-AS1 ENSG00000244926 ncRNA_intronic Human antisense chr11:43941621 chr11:43941637 . . 0 37 hm5C_associated_SNPs_9049 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:43941612-43941663
64251 chr11 44129386 44129386 1 + A G rs4755779 44129385 + 44129365 44129405 41 CTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA CTGGGCCTCATTGCCACTGGCGTGTTTCAGTTTTGGCCCCA < 41bp 1 0.332979693093246 1 0.104183822870255 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129385 chr11:44129386 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_9051 2 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr11 44129386 44129386 1 + A G rs4755779 44129403 + 44129383 44129423 41 GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA GGCGTGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA < 41bp 1 0.04162201199823 1 0.0186623334884644 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129403 chr11:44129386 nonsynonymous SNV 0.999 0 4 hm5C_associated_SNPs_9052 2 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr11 44129386 44129386 1 + A G rs4755779 44129404 + 44129384 44129424 41 GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT GCGTGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT < 41bp 1 0.0320676131461875 1 0.0537253022193909 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129404 chr11:44129386 nonsynonymous SNV 0.999 0 3 hm5C_associated_SNPs_9053 2 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr11 44129412 44129412 1 + C G rs138982530 44129403 + 44129383 44129423 41 GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA GGCATGTTTCAGTTTTGGCCCCATTCTATGGAGTCCTCAAA < 41bp 1 0.0385329304264135 1 0.0270883738994598 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129403 chr11:44129412 nonsynonymous SNV 0.998 3 30 hm5C_associated_SNPs_9054 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr11 44129412 44129412 1 + C G rs138982530 44129404 + 44129384 44129424 41 GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT GCATGTTTCAGTTTTGGCCCCATTCTATGGAGTCCTCAAAT < 41bp 1 0.0338248430874376 1 0.0938252210617065 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129404 chr11:44129412 nonsynonymous SNV 0.998 3 29 hm5C_associated_SNPs_9055 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr11 44129508 44129508 1 + T C rs559280035 44129509 + 44129489 44129529 41 CCATCCCAGAGCGGGGGGATCTCAGTTGCAGAATGCACACG CCATCCCAGAGCGGGGGGACCTCAGTTGCAGAATGCACACG < 41bp 1 0.633275802383634 1 0.434960931539536 experiment 0.733448395232732 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129509 chr11:44129508 synonymous SNV . 0 20 hm5C_associated_SNPs_9056 0 0 1 RBM15 POSTAR2 ENCODE chr11:44129458-44129514
64251 chr11 44129781 44129781 1 + G A rs148121594 44129787 + 44129767 44129807 41 GAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTATCTCAC GAGACAGCACAAGCAATGGCCCAGCTCTCTAGGTATCTCAC < 41bp 1 0.0786540693123574 1 0.0805185437202454 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129787 chr11:44129781 synonymous SNV . 0 15 hm5C_associated_SNPs_9058 0 0 5 SND1 POSTAR2 ENCODE chr11:44129706-44129796
64251 chr11 44266131 44266131 1 + T C rs567830977 44266132 + 44266112 44266152 41 ATTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATG ATTTAAATCCAGCTGAGGCCCCCTTTGTTTTCAGTTCCATG < 41bp 1 0.0607933697093264 1 0.0578004419803619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 UTR3 Human protein_coding chr11:44266132 chr11:44266131 . . 0 20 hm5C_associated_SNPs_9059 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44266103-44266136
64251 chr11 44266131 44266131 1 + T C rs567830977 44266133 + 44266113 44266153 41 TTTAAATCCAGCTGAGGCTCCCTTTGTTTTCAGTTCCATGT TTTAAATCCAGCTGAGGCCCCCTTTGTTTTCAGTTCCATGT < 41bp 1 0.0394393985070606 1 0.039687842130661 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 UTR3 Human protein_coding chr11:44266133 chr11:44266131 . . 0 19 hm5C_associated_SNPs_9060 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44266103-44266136
64251 chr11 44639774 44639774 1 + C T rs541161774 44639783 + 44639763 44639803 41 CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCGA CTCATGAATCGTCCTGAGGTCACCTACCCCTGTTCCTGCGA < 41bp 1 0.345642001063241 1 0.102156907320023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44639783 chr11:44639774 synonymous SNV . 0 12 hm5C_associated_SNPs_9061 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:44639768-44639799
64251 chr11 44639801 44639801 1 + C A rs139816598 44639783 + 44639763 44639803 41 CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCGA CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGAGA < 41bp 1 0.321519406215583 1 0.0883147120475769 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44639783 chr11:44639801 stopgain 0.396 1 39 hm5C_associated_SNPs_9062 0 0 2 SND1 POSTAR2 ENCODE chr11:44639711-44639850
64251 chr11 45833077 45833077 1 + A C rs140259547 45833079 + 45833059 45833099 41 TATCAGAAAGTTGAAGGAACCAGTGTTTACAAGTAATACCA TATCAGAAAGTTGAAGGACCCAGTGTTTACAAGTAATACCA < 41bp 1 0.401328020627443 1 0.340782105922699 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC35C1 ENSG00000181830 UTR3 Human protein_coding chr11:45833079 chr11:45833077 . . 0 19 hm5C_associated_SNPs_9075 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:45833075-45833101
64251 chr11 45923988 45923988 1 + G A rs370741115 45923984 + 45923964 45924004 41 GAGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCG GAGCTGCCCCCCCAGAGCGGCCCCACCCCCACCACAGATCG < 41bp 1 0.124247690245729 1 0.155689805746078 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923984 chr11:45923988 nonsynonymous SNV 0.301 0 25 hm5C_associated_SNPs_9076 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923985 + 45923965 45924005 41 AGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGA AGCTGCCCCCCCAGAGCGGCCCCACCCCCACCACAGATCGA < 41bp 1 0.0275335579726118 1 0.0936552584171295 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923985 chr11:45923988 nonsynonymous SNV 0.301 0 24 hm5C_associated_SNPs_9077 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923986 + 45923966 45924006 41 GCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAG GCTGCCCCCCCAGAGCGGCCCCACCCCCACCACAGATCGAG < 41bp 1 0.0298230280996193 1 0.0644825100898743 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923986 chr11:45923988 nonsynonymous SNV 0.301 0 23 hm5C_associated_SNPs_9078 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923987 + 45923967 45924007 41 CTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGG CTGCCCCCCCAGAGCGGCCCCACCCCCACCACAGATCGAGG < 41bp 1 0.0995643710836397 1 0.181822180747986 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923987 chr11:45923988 nonsynonymous SNV 0.301 0 22 hm5C_associated_SNPs_9079 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923989 + 45923969 45924009 41 GCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCA GCCCCCCCAGAGCGGCCCCACCCCCACCACAGATCGAGGCA < 41bp 1 0.0803649250484551 1 0.164943665266037 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923989 chr11:45923988 nonsynonymous SNV 0.301 0 20 hm5C_associated_SNPs_9080 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923990 + 45923970 45924010 41 CCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCAC CCCCCCCAGAGCGGCCCCACCCCCACCACAGATCGAGGCAC < 41bp 1 0.382599992555471 1 0.49979904294014 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923990 chr11:45923988 nonsynonymous SNV 0.301 0 19 hm5C_associated_SNPs_9081 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923991 + 45923971 45924011 41 CCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACC CCCCCCAGAGCGGCCCCACCCCCACCACAGATCGAGGCACC < 41bp 1 0.107141198355514 1 0.152163207530975 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923991 chr11:45923988 nonsynonymous SNV 0.301 0 18 hm5C_associated_SNPs_9082 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923992 + 45923972 45924012 41 CCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACCT CCCCCAGAGCGGCCCCACCCCCACCACAGATCGAGGCACCT < 41bp 1 0.0536628146036375 1 0.199344456195831 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923992 chr11:45923988 nonsynonymous SNV 0.301 0 17 hm5C_associated_SNPs_9083 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45923988 45923988 1 + G A rs370741115 45923993 + 45923973 45924013 41 CCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACCTC CCCCAGAGCGGCCCCACCCCCACCACAGATCGAGGCACCTC < 41bp 1 0.736670023244254 1 0.429005682468414 experiment 0.526659953511492 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923993 chr11:45923988 nonsynonymous SNV 0.301 0 16 hm5C_associated_SNPs_9084 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924662 45924662 1 + G A rs148883443 45924677 + 45924657 45924697 41 TCCACGCCTGATGAACCCGACGTCCATTTCTCCAAGAAATT TCCACACCTGATGAACCCGACGTCCATTTCTCCAAGAAATT < 41bp 1 0.0282604120215251 1 0.0573947429656982 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45924677 chr11:45924662 synonymous SNV . 0 6 hm5C_associated_SNPs_9085 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:45924639-45924662
64251 chr11 46299287 46299287 1 + G A rs533803208 46299293 + 46299273 46299313 41 GCCACCCAGTCTCGGGGGAGCACTTAGCTCCCCCGCCCCGG GCCACCCAGTCTCGAGGGAGCACTTAGCTCCCCCGCCCCGG < 41bp 1 0.291458898218948 1 0.0510679483413696 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299293 chr11:46299287 . . 0 15 hm5C_associated_SNPs_9086 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299300 + 46299280 46299320 41 AGTCTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCAC AGTCTCGAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCAC < 41bp 1 0.435397882201858 1 0.798872470855713 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299300 chr11:46299287 . . 0 8 hm5C_associated_SNPs_9087 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299302 + 46299282 46299322 41 TCTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCC TCTCGAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCC < 41bp 1 0.352839808391227 1 0.199521541595459 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299302 chr11:46299287 . . 0 6 hm5C_associated_SNPs_9088 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299303 + 46299283 46299323 41 CTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCT CTCGAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCT < 41bp 1 0.304752996032582 1 0.267742514610291 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299303 chr11:46299287 . . 0 5 hm5C_associated_SNPs_9089 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299304 + 46299284 46299324 41 TCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTG TCGAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTG < 41bp 1 0.449996396516885 1 0.21250969171524 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299304 chr11:46299287 . . 0 4 hm5C_associated_SNPs_9090 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299305 + 46299285 46299325 41 CGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGT CGAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGT < 41bp 1 0.142778493497501 1 0.0851991772651672 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299305 chr11:46299287 . . 0 3 hm5C_associated_SNPs_9091 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299287 46299287 1 + G A rs533803208 46299306 + 46299286 46299326 41 GGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGTC GAGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGTC < 41bp 1 0.265558228016691 1 0.198799133300781 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299306 chr11:46299287 . . 0 2 hm5C_associated_SNPs_9092 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:46299273-46299307
64251 chr11 46299309 46299309 1 + C G rs11038846 46299293 + 46299273 46299313 41 GCCACCCAGTCTCGGGGGAGCACTTAGCTCCCCCGCCCCGG GCCACCCAGTCTCGGGGGAGCACTTAGCTCCCCCGCGCCGG < 41bp 1 0.295577966727853 1 0.143568694591522 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299293 chr11:46299309 . . 0 37 hm5C_associated_SNPs_9093 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299300 + 46299280 46299320 41 AGTCTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCAC AGTCTCGGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCAC < 41bp 1 0.491401895273581 1 0.640286564826965 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299300 chr11:46299309 . . 0 30 hm5C_associated_SNPs_9094 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299302 + 46299282 46299322 41 TCTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCC TCTCGGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCC < 41bp 1 0.370306158632796 1 0.184934765100479 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299302 chr11:46299309 . . 0 28 hm5C_associated_SNPs_9095 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299303 + 46299283 46299323 41 CTCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCT CTCGGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCCT < 41bp 1 0.340981319604765 1 0.405725479125977 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299303 chr11:46299309 . . 0 27 hm5C_associated_SNPs_9096 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299304 + 46299284 46299324 41 TCGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTG TCGGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCCTG < 41bp 1 0.568363627411812 1 0.316898554563522 experiment 0.863272745176376 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299304 chr11:46299309 . . 0 26 hm5C_associated_SNPs_9097 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299305 + 46299285 46299325 41 CGGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGT CGGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCCTGT < 41bp 1 0.367426392870213 1 0.174843847751617 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299305 chr11:46299309 . . 0 25 hm5C_associated_SNPs_9098 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46299309 46299309 1 + C G rs11038846 46299306 + 46299286 46299326 41 GGGGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGTC GGGGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCCTGTC < 41bp 1 0.474474989463396 1 0.443713456392288 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299306 chr11:46299309 . . 0 24 hm5C_associated_SNPs_9099 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr11 46387835 46387835 1 + G A rs143155087 46387834 + 46387814 46387854 41 CTTTCTTTAGGAGACATTTCCGGGGGAAGGTGCCAGGCCCT CTTTCTTTAGGAGACATTTCCAGGGGAAGGTGCCAGGCCCT < 41bp 1 0.797669070411219 1 0.988303303718567 experiment 0.404661859177561 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46387834 chr11:46387835 nonsynonymous SNV 0.209 0 22 hm5C_associated_SNPs_9100 0 0 3 AKAP8L POSTAR2 ENCODE chr11:46387810-46387878
64251 chr11 46387868 46387868 1 + A G rs1317826 46387881 + 46387861 46387901 41 GGGCAGCAGCGGCCCAGCAGCGTGGGGCTGCCCACAGGCAA GGGCAGCGGCGGCCCAGCAGCGTGGGGCTGCCCACAGGCAA < 41bp 1 0.77391705705529 1 0.821017742156982 experiment 0.45216588588942 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46387881 chr11:46387868 nonsynonymous SNV 0.067 0 8 hm5C_associated_SNPs_9101 0 0 2 AKAP8L POSTAR2 ENCODE chr11:46387810-46387878
64251 chr11 46403649 46403649 1 + G A rs20542 46403637 + 46403617 46403657 41 CGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCT CGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTACTGGCGCT < 41bp 1 0.0496096716644424 1 0.0764974057674408 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403637 chr11:46403649 synonymous SNV . 0 33 hm5C_associated_SNPs_9114 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403649 46403649 1 + G A rs20542 46403638 + 46403618 46403658 41 GAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTC GAGGCTTCCTCCTCCTCACCCTCCTCGCCCTACTGGCGCTC < 41bp 1 0.461794085416625 1 0.344084352254868 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403638 chr11:46403649 synonymous SNV . 0 32 hm5C_associated_SNPs_9115 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403649 46403649 1 + G A rs20542 46403643 + 46403623 46403663 41 TTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTC TTCCTCCTCCTCACCCTCCTCGCCCTACTGGCGCTCACCTC < 41bp 1 0.548404911802525 1 0.795686423778534 experiment 0.903190176394949 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403643 chr11:46403649 synonymous SNV . 0 27 hm5C_associated_SNPs_9116 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46695365 46695365 1 + C T rs114393370 46695360 + 46695340 46695380 41 CTAGGTCTACTCCATTCCTCCTGGCCCACCTGGGGCATTCA CTAGGTCTACTCCATTCCTCCTGGCTCACCTGGGGCATTCA < 41bp 1 0.367850419339209 1 0.235980451107025 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATG13 ENSG00000175224 UTR3 Human protein_coding chr11:46695360 chr11:46695365 . . 0 26 hm5C_associated_SNPs_9117 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:46695344-46695367
64251 chr11 46695365 46695365 1 + C T rs114393370 46695364 + 46695344 46695384 41 GTCTACTCCATTCCTCCTGGCCCACCTGGGGCATTCACTGG GTCTACTCCATTCCTCCTGGCTCACCTGGGGCATTCACTGG < 41bp 1 0.162159063110499 1 0.0335747301578522 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATG13 ENSG00000175224 UTR3 Human protein_coding chr11:46695364 chr11:46695365 . . 0 22 hm5C_associated_SNPs_9118 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:46695344-46695367
64251 chr11 47289864 47289864 1 + T C rs141966313 47289881 + 47289861 47289901 41 ATATGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATC ATACGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATC < 41bp 1 0.0781893185193252 1 0.01653653383255 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289881 chr11:47289864 synonymous SNV . 0 4 hm5C_associated_SNPs_9119 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:47289844-47289880
64251 chr11 47289906 47289906 1 + T A rs78765998 47289902 + 47289882 47289922 41 CTACGTCTCCATCCACCATCCCCATGTGAGTCTCCCCATGG CTACGTCTCCATCCACCATCCCCAAGTGAGTCTCCCCATGG < 41bp 1 0.45759951663835 1 0.672565937042236 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289902 chr11:47289906 nonsynonymous SNV 0.713 1 25 hm5C_associated_SNPs_9120 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:47289880-47289907
64251 chr11 47297564 47297564 1 + A G rs74698331 47297563 + 47297543 47297583 41 CTATCGATTGCTGCGCTCCCCAGTACCCGTCTCTGGGCAGA CTATCGATTGCTGCGCTCCCCGGTACCCGTCTCTGGGCAGA < 41bp 1 0.572518127398522 1 0.507054388523102 experiment 0.854963745202957 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47297563 chr11:47297564 synonymous SNV . 0 22 hm5C_associated_SNPs_9121 0 0 2 FMR1 POSTAR2 ENCODE chr11:47297552-47297602
64251 chr11 47437165 47437165 1 + G A rs536045005 47437171 + 47437151 47437191 41 CCCAGCCATGCTGTGGTTACCTCTCCTTGCCGCCCTGTCAC CCCAGCCATGCTGTAGTTACCTCTCCTTGCCGCCCTGTCAC < 41bp 1 0.315618961227067 1 0.0436452627182007 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC39A13 ENSG00000165915 UTR3 Human protein_coding chr11:47437171 chr11:47437165 . . 0 15 hm5C_associated_SNPs_9122 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47437109-47437189
64251 chr11 47437181 47437181 1 + C T rs529288093 47437171 + 47437151 47437191 41 CCCAGCCATGCTGTGGTTACCTCTCCTTGCCGCCCTGTCAC CCCAGCCATGCTGTGGTTACCTCTCCTTGCTGCCCTGTCAC < 41bp 1 0.280979697644951 1 0.0901876389980316 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC39A13 ENSG00000165915 UTR3 Human protein_coding chr11:47437171 chr11:47437181 . . 0 31 hm5C_associated_SNPs_9123 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47437109-47437189
64251 chr11 47587057 47587057 1 + T G rs183171144 47587063 + 47587043 47587083 41 CCGCCGTCACCCGGTGCGAGCCCGCGAGAGGCCTAGTGCAG CCGCCGTCACCCGGGGCGAGCCCGCGAGAGGCCTAGTGCAG < 41bp 1 0.480340897668116 1 0.330169916152954 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPMT1 ENSG00000110536;ENSG00000149187 UTR5 Human other chr11:47587063 chr11:47587057 . . 0 15 hm5C_associated_SNPs_9124 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:47587056-47587057
64251 chr11 47587057 47587057 1 + T G rs183171144 47587064 + 47587044 47587084 41 CGCCGTCACCCGGTGCGAGCCCGCGAGAGGCCTAGTGCAGC CGCCGTCACCCGGGGCGAGCCCGCGAGAGGCCTAGTGCAGC < 41bp 1 0.61029470445802 1 0.551515161991119 experiment 0.77941059108396 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPMT1 ENSG00000110536;ENSG00000149187 UTR5 Human other chr11:47587064 chr11:47587057 . . 0 14 hm5C_associated_SNPs_9125 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:47587056-47587057
64251 chr11 47587147 47587147 1 + C T rs188981991 47587131 + 47587111 47587151 41 GCTCTTCTCGCGGGTCCGGACCGCGAGCGCGGGGGCCGACG GCTCTTCTCGCGGGTCCGGACCGCGAGCGCGGGGGCTGACG < 41bp 1 0.653465487637431 1 0.144940733909607 experiment 0.693069024725138 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PTPMT1 ENSG00000110536 UTR5 Human protein_coding chr11:47587131 chr11:47587147 . . 0 37 hm5C_associated_SNPs_9128 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr11:47587111-47587148
64251 chr11 57508379 57508379 1 + C G rs115411262 57508393 + 57508373 57508413 41 ACTAACCCTCTGACATACTCCCCACACCCAGTTGATGGCTT ACTAACGCTCTGACATACTCCCCACACCCAGTTGATGGCTT < 41bp 1 0.121833735202305 1 0.383266687393188 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMX2-CTNND1 ENSG00000213593 UTR3 Human protein_coding chr11:57508393 chr11:57508379 . . 0 7 hm5C_associated_SNPs_9130 0 0 27 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:57508360-57508380
64251 chr11 58379197 58379197 1 + G A rs140688902 58379202 + 58379182 58379222 41 AATTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCA AATTAGAGAGGATGAAGAACCTCCAAGGAAGTGAGTAGGCA < 41bp 1 0.766675635961821 1 0.807965040206909 experiment 0.466648728076358 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379202 chr11:58379197 synonymous SNV . 0 16 hm5C_associated_SNPs_9131 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr11 58379197 58379197 1 + G A rs140688902 58379204 + 58379184 58379224 41 TTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAAT TTAGAGAGGATGAAGAACCTCCAAGGAAGTGAGTAGGCAAT < 41bp 1 0.197354910214127 1 0.305800199508667 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379204 chr11:58379197 synonymous SNV . 0 14 hm5C_associated_SNPs_9132 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr11 58379197 58379197 1 + G A rs140688902 58379205 + 58379185 58379225 41 TAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAATT TAGAGAGGATGAAGAACCTCCAAGGAAGTGAGTAGGCAATT < 41bp 1 0.505256875684645 1 0.305405139923096 experiment 0.98948624863071 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379205 chr11:58379197 synonymous SNV . 0 13 hm5C_associated_SNPs_9133 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr11 59323936 59323936 1 + T C rs538766270 59323918 + 59323898 59323938 41 AGGGGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA AGGGGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTCTA < 41bp 1 0.626732558037698 1 0.308619797229767 experiment 0.746534883924605 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323918 chr11:59323936 . . 0 39 hm5C_associated_SNPs_9135 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323926 + 59323906 59323946 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGTAGAGCATCAGACTTCTAATCTGAGG < 41bp 1 0.43952108823344 1 0.0615642964839935 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323926 chr11:59323936 . . 0 31 hm5C_associated_SNPs_9136 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323929 + 59323909 59323949 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGTAGAGCATCAGACTTCTAATCTGAGGGTC < 41bp 1 0.395771645329821 1 0.515528559684753 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323929 chr11:59323936 . . 0 28 hm5C_associated_SNPs_9137 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323933 + 59323913 59323953 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCGGG TCAGTCGGTAGAGCATCAGACTTCTAATCTGAGGGTCCGGG < 41bp 1 0.0863999097664275 1 0.0262148380279541 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323933 chr11:59323936 . . 0 24 hm5C_associated_SNPs_9138 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323941 + 59323921 59323961 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCGGGGTTCAAGT TAGAGCATCAGACTTCTAATCTGAGGGTCCGGGGTTCAAGT < 41bp 1 0.553544549618586 1 0.780838489532471 experiment 0.892910900762829 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323941 chr11:59323936 . . 0 16 hm5C_associated_SNPs_9139 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323949 + 59323929 59323969 41 CAGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTC CAGACTTCTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTC < 41bp 1 0.487540040844373 1 0.733880698680878 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323949 chr11:59323936 . . 0 8 hm5C_associated_SNPs_9140 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323936 59323936 1 + T C rs538766270 59323950 + 59323930 59323970 41 AGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCG AGACTTCTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCG < 41bp 1 0.798415867984895 1 0.91365659236908 experiment 0.40316826403021 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323950 chr11:59323936 . . 0 7 hm5C_associated_SNPs_9141 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323933 + 59323913 59323953 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCGGG TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGGGG < 41bp 1 0.0372723581970487 1 0.0167096257209778 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323933 chr11:59323950 . . 0 38 hm5C_associated_SNPs_9142 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323941 + 59323921 59323961 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCGGGGTTCAAGT TAGAGCATCAGACTTTTAATCTGAGGGTCGGGGGTTCAAGT < 41bp 1 0.579205869120071 1 0.746915698051453 experiment 0.841588261759857 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323941 chr11:59323950 . . 0 30 hm5C_associated_SNPs_9143 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323949 + 59323929 59323969 41 CAGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTC CAGACTTTTAATCTGAGGGTCGGGGGTTCAAGTCCCTGTTC < 41bp 1 0.796153197171777 1 0.887682914733887 experiment 0.407693605656445 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323949 chr11:59323950 . . 0 22 hm5C_associated_SNPs_9144 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323957 + 59323937 59323977 41 TAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGAT TAATCTGAGGGTCGGGGGTTCAAGTCCCTGTTCGGGCGGAT < 41bp 1 0.32051835164431 1 0.591782927513123 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323957 chr11:59323950 . . 0 14 hm5C_associated_SNPs_9145 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323962 + 59323942 59323982 41 TGAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGT TGAGGGTCGGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGT < 41bp 1 0.191820800226401 1 0.0488811731338501 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323962 chr11:59323950 . . 0 9 hm5C_associated_SNPs_9146 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323963 + 59323943 59323983 41 GAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTT GAGGGTCGGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTT < 41bp 1 0.123303085979896 1 0.0529439151287079 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323963 chr11:59323950 . . 0 8 hm5C_associated_SNPs_9147 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323964 + 59323944 59323984 41 AGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTT AGGGTCGGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTT < 41bp 1 0.204292014871655 1 0.0638445615768433 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323964 chr11:59323950 . . 0 7 hm5C_associated_SNPs_9148 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323950 59323950 1 + C G rs7924849 59323969 + 59323949 59323989 41 CCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTTTAGTT CGGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTTTAGTT < 41bp 1 0.535842718140107 1 0.882438659667969 experiment 0.928314563719786 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323969 chr11:59323950 . . 0 2 hm5C_associated_SNPs_9149 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323933 + 59323913 59323953 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCGGG TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG < 41bp 1 0.0348913387752366 1 0.00598177313804626 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323933 chr11:59323951 . . 0 39 hm5C_associated_SNPs_9150 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323941 + 59323921 59323961 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCGGGGTTCAAGT TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.619487472356565 1 0.813588976860046 experiment 0.76102505528687 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323941 chr11:59323951 . . 0 31 hm5C_associated_SNPs_9151 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323949 + 59323929 59323969 41 CAGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTC CAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTC < 41bp 1 0.348862276158819 1 0.47988349199295 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323949 chr11:59323951 . . 0 23 hm5C_associated_SNPs_9152 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323950 + 59323930 59323970 41 AGACTTTTAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCG AGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCG < 41bp 1 0.726824140962986 1 0.813274621963501 experiment 0.546351718074028 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323950 chr11:59323951 . . 0 22 hm5C_associated_SNPs_9153 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323957 + 59323937 59323977 41 TAATCTGAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGAT TAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGAT < 41bp 1 0.28721995894069 1 0.239699393510818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323957 chr11:59323951 . . 0 15 hm5C_associated_SNPs_9154 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323962 + 59323942 59323982 41 TGAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGT TGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGATGCTGT < 41bp 1 0.135640612239885 1 0.0426632761955261 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323962 chr11:59323951 . . 0 10 hm5C_associated_SNPs_9155 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323963 + 59323943 59323983 41 GAGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTT GAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTT < 41bp 1 0.0798671462594558 1 0.0480575561523438 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323963 chr11:59323951 . . 0 9 hm5C_associated_SNPs_9156 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323964 + 59323944 59323984 41 AGGGTCCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTT AGGGTCCAGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTT < 41bp 1 0.169932397412582 1 0.0583163201808929 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323964 chr11:59323951 . . 0 8 hm5C_associated_SNPs_9157 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59323951 59323951 1 + G A rs7952367 59323969 + 59323949 59323989 41 CCGGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTTTAGTT CCAGGGTTCAAGTCCCTGTTCGGGCGGATGCTGTTTTAGTT < 41bp 1 0.554269981666326 1 0.88853508234024 experiment 0.891460036667348 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target OR4D9;OSBP ENSG00000254770;ENSG00000252893 intergenic Human other chr11:59323969 chr11:59323951 . . 0 3 hm5C_associated_SNPs_9158 0 0 26 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:59323880-59323960
64251 chr11 59569210 59569210 1 + T C rs76410717 59569203 + 59569183 59569223 41 GGTGTATTCACTCATGTGTTCCAGATGTATTCTAATTGTGT GGTGTATTCACTCATGTGTTCCAGATGCATTCTAATTGTGT < 41bp 1 0.180604842310385 1 0.1291264295578 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STX3 ENSG00000166900 UTR3 Human protein_coding chr11:59569203 chr11:59569210 . . 0 28 hm5C_associated_SNPs_9159 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr11:59569209-59569235
64251 chr11 60617812 60617812 1 + C T rs117062491 60617811 + 60617791 60617831 41 AGATCTGAGCTCAGGACGGCCCGAGGCCTTCCATGGCCAAC AGATCTGAGCTCAGGACGGCCTGAGGCCTTCCATGGCCAAC < 41bp 1 0.604272213385887 1 0.254343926906586 experiment 0.791455573228227 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCDC86 ENSG00000256813 ncRNA_intronic Human antisense chr11:60617811 chr11:60617812 . . 0 22 hm5C_associated_SNPs_9160 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:60617792-60617813
64251 chr11 60689674 60689674 1 + G A rs372992625 60689694 + 60689674 60689714 41 GAGCTGAGCTGCTTCGGGGCCATGCAGCCCTCCTGCCAGCC AAGCTGAGCTGCTTCGGGGCCATGCAGCCCTCCTGCCAGCC < 41bp 1 0.302338658356447 1 0.0984079837799072 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM109 ENSG00000256196 ncRNA_intronic Human antisense chr11:60689694 chr11:60689674 . . 0 1 hm5C_associated_SNPs_9161 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:60689660-60689680
64251 chr11 60702039 60702039 1 + G A rs547223000 60702059 + 60702039 60702079 41 GGTGTGCGCTTCCTCGCCCCCTTCGCGGCCCACCCGCTGGA AGTGTGCGCTTCCTCGCCCCCTTCGCGGCCCACCCGCTGGA < 41bp 1 0.414198670229434 1 0.326725244522095 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60702059 chr11:60702039 nonsynonymous SNV 0.872 0 1 hm5C_associated_SNPs_9162 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:60702026-60702054
64251 chr11 60703981 60703981 1 + C T rs150465123 60703977 + 60703957 60703997 41 GCCACTGACCCCACCTCCCCCCAGCCCCACAACTGGGTCTG GCCACTGACCCCACCTCCCCCCAGTCCCACAACTGGGTCTG < 41bp 1 0.141691618581171 1 0.449329078197479 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703977 chr11:60703981 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_9163 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:60703963-60704007
64251 chr11 60704123 60704123 1 + G A rs199588097 60704142 + 60704122 60704162 41 GGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC GACCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC < 41bp 1 0.533715721341059 1 0.886388301849365 experiment 0.932568557317882 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704142 chr11:60704123 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_9164 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:60704083-60704129
64251 chr11 60704125 60704125 1 + C T rs201654663 60704142 + 60704122 60704162 41 GGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC GGCTCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC < 41bp 1 0.559368187000452 1 0.888276696205139 experiment 0.881263625999096 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704142 chr11:60704125 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_9165 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:60704083-60704129
64251 chr11 60704419 60704419 1 + G A rs201645478 60704431 + 60704411 60704451 41 GGGGCAACGAGGGTGGAGGTCCCACTGAGCCTCTCGCCTGC GGGGCAACAAGGGTGGAGGTCCCACTGAGCCTCTCGCCTGC < 41bp 1 0.134169058868908 1 0.131736844778061 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM132A ENSG00000006118 UTR3 Human protein_coding chr11:60704431 chr11:60704419 . . 0 9 hm5C_associated_SNPs_9166 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:60704399-60704433
64251 chr11 61129724 61129724 1 - A G rs7120780 61129707 - 61129687 61129727 41 AGCTTTCGCTGTTCGGGGCCCGGCCTGCTCCGGGCCCTCCC AGCCTTCGCTGTTCGGGGCCCGGCCTGCTCCGGGCCCTCCC < 41bp 1 0.427988819790901 1 0.36023473739624 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CYB561A3;TMEM138 ENSG00000149483;ENSG00000162144 UTR5 Human other chr11:61129707 chr11:61129724 . . 0 4 hm5C_associated_SNPs_9168 1 0 6 EIF3B POSTAR2 GSE65004,GSM1585668 chr11:61129700-61129725
64251 chr11 61165769 61165769 1 + A G rs111371929 61165787 + 61165767 61165807 41 GCAGCCCATCAGGCTGACACCACACATATTGCTTCTGGTAC GCGGCCCATCAGGCTGACACCACACATATTGCTTCTGGTAC < 41bp 1 0.378507552810098 1 0.090362936258316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM216 ENSG00000187049 UTR3 Human protein_coding chr11:61165787 chr11:61165769 . . 0 3 hm5C_associated_SNPs_9169 3 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:61165759-61165780
64251 chr11 61512111 61512111 1 + C T rs185308016 61512108 + 61512088 61512128 41 ATCGCTGCTGAGCTGGGGGTCCGCATCCCTACCTCAGCTTA ATCGCTGCTGAGCTGGGGGTCCGTATCCCTACCTCAGCTTA < 41bp 1 0.279128715171236 1 0.108972907066345 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DAGLA ENSG00000134780 UTR3 Human protein_coding chr11:61512108 chr11:61512111 . . 0 24 hm5C_associated_SNPs_9179 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:61512110-61512152
64251 chr11 61512111 61512111 1 + C T rs185308016 61512109 + 61512089 61512129 41 TCGCTGCTGAGCTGGGGGTCCGCATCCCTACCTCAGCTTAG TCGCTGCTGAGCTGGGGGTCCGTATCCCTACCTCAGCTTAG < 41bp 1 0.098028611711279 1 0.145927965641022 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DAGLA ENSG00000134780 UTR3 Human protein_coding chr11:61512109 chr11:61512111 . . 0 23 hm5C_associated_SNPs_9180 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:61512110-61512152
64251 chr11 61634155 61634155 1 + G A rs114296331 61634168 + 61634148 61634188 41 AGGTCTCGTCCCAGCCCTCCCCATCTCGGGGCTGCTGTGTG AGGTCTCATCCCAGCCCTCCCCATCTCGGGGCTGCTGTGTG < 41bp 1 0.0619381584649769 1 0.0877505838871002 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FADS2 ENSG00000134824 UTR3 Human protein_coding chr11:61634168 chr11:61634155 . . 0 8 hm5C_associated_SNPs_9186 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:61634140-61634180
64251 chr11 61891502 61891502 1 + C T rs143890868 61891497 + 61891477 61891517 41 AAAATCATAGTTTTCGCCCGCGCTGCGCCGCCTGGTTGCTC AAAATCATAGTTTTCGCCCGCGCTGTGCCGCCTGGTTGCTC < 41bp 1 0.172329553925899 1 0.177614092826843 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 UTR5 Human protein_coding chr11:61891497 chr11:61891502 . . 0 26 hm5C_associated_SNPs_9218 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585674 chr11:61891486-61891510
64251 chr11 61897298 61897298 1 + G A rs12281503 61897299 + 61897279 61897319 41 AGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT AGCCAGCTGAGCTCCCGACACCTCCGCAGCAAGGACAGTGT < 41bp 1 0.0541205730089086 1 0.0987001061439514 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897299 chr11:61897298 nonsynonymous SNV 0.807 0 20 hm5C_associated_SNPs_9219 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr11 61897799 61897799 1 + G A rs36067669 61897785 + 61897765 61897805 41 AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACAGGACTC < 41bp 1 0.381115949499472 1 0.183012753725052 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897785 chr11:61897799 nonsynonymous SNV 0.002 0 35 hm5C_associated_SNPs_9220 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr11:61897773-61897801
64251 chr11 61913144 61913144 1 + C T rs116462742 61913150 + 61913130 61913170 41 GGCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGTGG GGCCAAGAAAAAGGTGGCGGCCAAGAAGATGGAGGAGGTGG < 41bp 1 0.1073121460786 1 0.316228210926056 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913150 chr11:61913144 nonsynonymous SNV 0.283 0 15 hm5C_associated_SNPs_9221 0 0 4 CPSF6 POSTAR2 ENCODE chr11:61913084-61913157
64251 chr11 61913144 61913144 1 + C T rs116462742 61913151 + 61913131 61913171 41 GCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGTGGA GCCAAGAAAAAGGTGGCGGCCAAGAAGATGGAGGAGGTGGA < 41bp 1 0.624704787589879 1 0.785861968994141 experiment 0.750590424820242 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913151 chr11:61913144 nonsynonymous SNV 0.283 0 14 hm5C_associated_SNPs_9222 0 0 4 CPSF6 POSTAR2 ENCODE chr11:61913084-61913157
64251 chr11 62104937 62104937 1 + T G rs2246920 62104948 + 62104928 62104968 41 CAGAGCGGTTGCGGGCTGAGCGGTTTCGAGCCGGCGTCGGG CAGAGCGGTGGCGGGCTGAGCGGTTTCGAGCCGGCGTCGGG < 41bp 1 0.652866708037646 1 0.461263835430145 experiment 0.694266583924708 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASRGL1 ENSG00000255118 ncRNA_intronic Human antisense chr11:62104948 chr11:62104937 . . 0 10 hm5C_associated_SNPs_9223 0 0 1 NCBP2 POSTAR2 ENCODE chr11:62104923-62105020
64251 chr11 62432903 62432903 1 + C G rs114019582 62432915 + 62432895 62432935 41 CTCCTTTTCTTGGCGGGGATCGGGCTTGTGGTGCCGCTCCC CTCCTTTTGTTGGCGGGGATCGGGCTTGTGGTGCCGCTCCC < 41bp 1 0.620306731894399 1 0.96754789352417 experiment 0.759386536211202 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SNORA57 ENSG00000206597 ncRNA_exonic Human snoRNA chr11:62432915 chr11:62432903 . . 0 9 hm5C_associated_SNPs_9224 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:62432891-62432920
64251 chr11 62550237 62550237 1 + T G rs139505440 62550249 + 62550229 62550269 41 GCAGATCCTGTGCGGCCGCTCTGCTGCCACTATGGAGCCGT GCAGATCCGGTGCGGCCGCTCTGCTGCCACTATGGAGCCGT < 41bp 1 0.754953515816494 1 0.516953408718109 experiment 0.490092968367013 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62550249 chr11:62550237 synonymous SNV . 0 9 hm5C_associated_SNPs_9225 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:62550232-62550272
64251 chr11 62655900 62655900 1 + C T rs150311954 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC TGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC < 41bp 1 0.43210905171628 1 0.23368838429451 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655900 nonsynonymous SNV 0.001 1 1 hm5C_associated_SNPs_9226 0 0 58 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:62655860-62655900
64251 chr11 62656240 62656240 1 + T A rs181564225 62656234 + 62656214 62656254 41 CTTTGGCTTCTGATTTTTCTCTTTTTTAAAAACAAACAAAC CTTTGGCTTCTGATTTTTCTCTTTTTAAAAAACAAACAAAC < 41bp 1 0.126735226423767 1 0.274093717336655 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control SLC3A2 ENSG00000168003 UTR3 Human protein_coding chr11:62656234 chr11:62656240 . . 0 27 hm5C_associated_SNPs_9227 0 0 82 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:62656240-62656260
64251 chr11 62656316 62656316 1 + C G rs6932 62656319 + 62656299 62656339 41 TGCCTTCAAATAAAAGTCACCCCTGCATGGTGAAGTCTTCC TGCCTTCAAATAAAAGTGACCCCTGCATGGTGAAGTCTTCC < 41bp 1 0.101660424761812 1 0.0415571928024292 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC3A2 ENSG00000168003 UTR3 Human protein_coding chr11:62656319 chr11:62656316 . . 0 18 hm5C_associated_SNPs_9228 0 0 17 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:62656200-62656320
64251 chr11 63449101 63449101 1 + G T rs372883387 63449096 + 63449076 63449116 41 TTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGA TTTCACCCTTCTCCCACCCTCGCTCTCGTAGCCATGGCGGA < 41bp 1 0.424491758261542 1 0.195322215557098 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RTN3 ENSG00000133318 UTR5 Human protein_coding chr11:63449096 chr11:63449101 . . 0 26 hm5C_associated_SNPs_9229 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:63449068-63449101
64251 chr11 63449101 63449101 1 + G T rs372883387 63449100 + 63449080 63449120 41 ACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCG ACCCTTCTCCCACCCTCGCTCTCGTAGCCATGGCGGAGCCG < 41bp 1 0.586739523501893 1 0.228437423706055 experiment 0.826520952996214 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RTN3 ENSG00000133318 UTR5 Human protein_coding chr11:63449100 chr11:63449101 . . 0 22 hm5C_associated_SNPs_9230 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:63449068-63449101
64251 chr11 63526236 63526236 1 + T C rs8343 63526217 + 63526197 63526237 41 TTCTTTAATGATTTAACTATCAACTTGATAAATAACTTATA TTCTTTAATGATTTAACTATCAACTTGATAAATAACTTACA < 41bp 1 0.334815102478993 1 0.288797706365585 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RTN3 ENSG00000133318 UTR3 Human protein_coding chr11:63526217 chr11:63526236 . . 0 40 hm5C_associated_SNPs_9231 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63526091-63526308
64251 chr11 63526339 63526339 1 + G A rs1802332 63526347 + 63526327 63526367 41 TGCTGCGGTGGCGGTCACTCCCTCTGCCACTATCCCCAGGG TGCTGCGGTGGCAGTCACTCCCTCTGCCACTATCCCCAGGG < 41bp 1 0.254729978129133 1 0.436818242073059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RTN3 ENSG00000133318 UTR3 Human protein_coding chr11:63526347 chr11:63526339 . . 0 13 hm5C_associated_SNPs_9232 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:63526291-63526341
64251 chr11 63526339 63526339 1 + G A rs1802332 63526348 + 63526328 63526368 41 GCTGCGGTGGCGGTCACTCCCTCTGCCACTATCCCCAGGGA GCTGCGGTGGCAGTCACTCCCTCTGCCACTATCCCCAGGGA < 41bp 1 0.759247939390194 1 0.255990654230118 experiment 0.481504121219612 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RTN3 ENSG00000133318 UTR3 Human protein_coding chr11:63526348 chr11:63526339 . . 0 12 hm5C_associated_SNPs_9233 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:63526291-63526341
64251 chr11 63526339 63526339 1 + G A rs1802332 63526350 + 63526330 63526370 41 TGCGGTGGCGGTCACTCCCTCTGCCACTATCCCCAGGGAAG TGCGGTGGCAGTCACTCCCTCTGCCACTATCCCCAGGGAAG < 41bp 1 0.487028314134249 1 0.151763141155243 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTN3 ENSG00000133318 UTR3 Human protein_coding chr11:63526350 chr11:63526339 . . 0 10 hm5C_associated_SNPs_9234 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:63526291-63526341
64251 chr11 63526991 63526991 1 + C T rs150406359 63526989 + 63526969 63527009 41 CTCCATCTTATTTTCTTAGCCCCCTTTGAGTGTTTTAACTG CTCCATCTTATTTTCTTAGCCCTCTTTGAGTGTTTTAACTG < 41bp 1 0.104282291691426 1 0.055157333612442 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTN3 ENSG00000133318 UTR3 Human protein_coding chr11:63526989 chr11:63526991 . . 0 23 hm5C_associated_SNPs_9235 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:63526960-63526998
64251 chr11 63586472 63586472 1 + C T rs189841854 63586469 + 63586449 63586489 41 TCCCCGGGCGGAGAGCCCCTCTCCAGGTGAGCCCTCCTGAG TCCCCGGGCGGAGAGCCCCTCTCTAGGTGAGCCCTCCTGAG < 41bp 1 0.695306524294986 1 0.742794454097748 experiment 0.609386951410029 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control C11orf84 ENSG00000168005 CDS Human protein_coding chr11:63586469 chr11:63586472 nonsynonymous SNV 0.802 2 24 hm5C_associated_SNPs_9236 0 0 3 BUD13 POSTAR2 ENCODE chr11:63586430-63586490
64251 chr11 63676415 63676415 1 + C T rs371393398 63676421 + 63676401 63676441 41 GAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGTATGAA GAGGCCAAGCCCCGTTCCCTCCGCTTCACGTGGAGTATGAA < 41bp 1 0.123937717030445 1 0.230584710836411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MARK2 ENSG00000072518 CDS Human protein_coding chr11:63676421 chr11:63676415 synonymous SNV . 0 15 hm5C_associated_SNPs_9237 0 0 2 FXR2 POSTAR2 ENCODE chr11:63676390-63676501
64251 chr11 63706474 63706474 1 + G A rs873928 63706472 + 63706452 63706492 41 GGCGCATGCGCGTTGCAGGGCCGTCCGCTCTGCTGCCGCCG GGCGCATGCGCGTTGCAGGGCCATCCGCTCTGCTGCCGCCG < 41bp 1 0.106644762562341 1 0.0432336032390594 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706472 chr11:63706474 . . 0 23 hm5C_associated_SNPs_9238 0 0 1 DDX3X POSTAR2 ENCODE chr11:63706456-63706575
64251 chr11 63706474 63706474 1 + G A rs873928 63706484 + 63706464 63706504 41 TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTGTTGCAGCCA TTGCAGGGCCATCCGCTCTGCTGCCGCCGCTGTTGCAGCCA < 41bp 1 0.490316474892525 1 0.321981728076935 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706484 chr11:63706474 . . 0 11 hm5C_associated_SNPs_9239 0 0 1 DDX3X POSTAR2 ENCODE chr11:63706456-63706575
64251 chr11 63706481 63706481 1 + C T rs549363738 63706472 + 63706452 63706492 41 GGCGCATGCGCGTTGCAGGGCCGTCCGCTCTGCTGCCGCCG GGCGCATGCGCGTTGCAGGGCCGTCCGCTTTGCTGCCGCCG < 41bp 1 0.165067350160893 1 0.103573083877563 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706472 chr11:63706481 . . 0 30 hm5C_associated_SNPs_9240 0 0 4 DDX3X POSTAR2 ENCODE chr11:63706477-63706575
64251 chr11 63706481 63706481 1 + C T rs549363738 63706484 + 63706464 63706504 41 TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTGTTGCAGCCA TTGCAGGGCCGTCCGCTTTGCTGCCGCCGCTGTTGCAGCCA < 41bp 1 0.595150775583185 1 0.359370648860931 experiment 0.809698448833631 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706484 chr11:63706481 . . 0 18 hm5C_associated_SNPs_9241 0 0 4 DDX3X POSTAR2 ENCODE chr11:63706477-63706575
64251 chr11 63706504 63706504 1 + A G rs3903058 63706484 + 63706464 63706504 41 TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTGTTGCAGCCA TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTGTTGCAGCCG < 41bp 1 0.528556766048908 1 0.378329634666443 experiment 0.942886467902184 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706484 chr11:63706504 . . 0 41 hm5C_associated_SNPs_9242 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:63706503-63706504
64251 chr11 63723945 63723945 1 + A G rs320127 63723957 + 63723937 63723977 41 CACTGGATACGTGGCACCAACTGGTCAATGGGTGCTTGGTG CACTGGATGCGTGGCACCAACTGGTCAATGGGTGCTTGGTG < 41bp 1 0.676926459579923 1 0.243945419788361 experiment 0.646147080840153 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA40 ENSG00000110583 UTR3 Human protein_coding chr11:63723957 chr11:63723945 . . 0 9 hm5C_associated_SNPs_9243 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63723945-63723983
64251 chr11 63764302 63764302 1 + G C rs7939571 63764315 + 63764295 63764335 41 CCATGCTGGGCCCGCCTTTCCATCCCACCCCCAGGTTCAAG CCATGCTCGGCCCGCCTTTCCATCCCACCCCCAGGTTCAAG < 41bp 1 0.173447717067084 1 0.249467313289642 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OTUB1 ENSG00000167770 intronic Human protein_coding chr11:63764315 chr11:63764302 . . 0 8 hm5C_associated_SNPs_9244 0 0 7 PRPF8 POSTAR2 ENCODE chr11:63764208-63764303
64251 chr11 63764308 63764308 1 + G A rs7117821 63764315 + 63764295 63764335 41 CCATGCTGGGCCCGCCTTTCCATCCCACCCCCAGGTTCAAG CCATGCTGGGCCCACCTTTCCATCCCACCCCCAGGTTCAAG < 41bp 1 0.17123312436084 1 0.113289833068848 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OTUB1 ENSG00000167770 intronic Human protein_coding chr11:63764315 chr11:63764308 . . 0 14 hm5C_associated_SNPs_9245 0 0 9 PRPF8 POSTAR2 ENCODE chr11:63764303-63764363
64251 chr11 63971639 63971639 1 + A G rs200565900 63971624 + 63971604 63971644 41 TGTTCATCCCCCCTTCCCTTCGCCCTCATGTGGAAAGAGGA TGTTCATCCCCCCTTCCCTTCGCCCTCATGTGGAAGGAGGA < 41bp 1 0.391900313499817 1 0.765126764774323 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STIP1 ENSG00000168439 UTR3 Human protein_coding chr11:63971624 chr11:63971639 . . 0 36 hm5C_associated_SNPs_9246 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:63971591-63971640
64251 chr11 63971639 63971639 1 + A G rs200565900 63971658 + 63971638 63971678 41 AAGAGGAGCTGGGACCGCGGCGAGCAGCACGGAGCGGAAGG AGGAGGAGCTGGGACCGCGGCGAGCAGCACGGAGCGGAAGG < 41bp 1 0.796970676561792 1 0.67581033706665 experiment 0.406058646876415 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout STIP1 ENSG00000168439 UTR3 Human protein_coding chr11:63971658 chr11:63971639 . . 0 2 hm5C_associated_SNPs_9247 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:63971591-63971640
64251 chr11 63971652 63971652 1 + C T rs145110088 63971658 + 63971638 63971678 41 AAGAGGAGCTGGGACCGCGGCGAGCAGCACGGAGCGGAAGG AAGAGGAGCTGGGATCGCGGCGAGCAGCACGGAGCGGAAGG < 41bp 1 0.767776098815167 1 0.636811912059784 experiment 0.464447802369666 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout STIP1 ENSG00000168439 UTR3 Human protein_coding chr11:63971658 chr11:63971652 . . 0 15 hm5C_associated_SNPs_9248 0 0 12 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:63971625-63971668
64251 chr11 63994365 63994365 1 + C T rs201149562 63994351 + 63994331 63994371 41 GCCTATTGGCTCTCGGGGGCCACAGCTGCTCCTGCGCCTGG GCCTATTGGCTCTCGGGGGCCACAGCTGCTCCTGTGCCTGG < 41bp 1 0.590220933266656 1 0.221288084983826 experiment 0.819558133466688 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994351 chr11:63994365 nonsynonymous SNV 0.439 2 35 hm5C_associated_SNPs_9250 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr11 64022459 64022459 1 + A G rs632439 64022456 + 64022436 64022476 41 ACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTT ACGGTGGTGTCTGGGCCAGACCCGGTGAACACAGTGTTCTT < 41bp 1 0.595515896868531 1 0.13567578792572 experiment 0.808968206262939 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022456 chr11:64022459 synonymous SNV . 0 24 hm5C_associated_SNPs_9254 0 0 1 PPIG POSTAR2 ENCODE chr11:64022407-64022465
64251 chr11 64022459 64022459 1 + A G rs632439 64022457 + 64022437 64022477 41 CGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTG CGGTGGTGTCTGGGCCAGACCCGGTGAACACAGTGTTCTTG < 41bp 1 0.4716461663343 1 0.641737222671509 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022457 chr11:64022459 synonymous SNV . 0 23 hm5C_associated_SNPs_9255 0 0 1 PPIG POSTAR2 ENCODE chr11:64022407-64022465
64251 chr11 64022459 64022459 1 + A G rs632439 64022458 + 64022438 64022478 41 GGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGA GGTGGTGTCTGGGCCAGACCCGGTGAACACAGTGTTCTTGA < 41bp 1 0.667029720634702 1 0.793699741363525 experiment 0.665940558730597 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022458 chr11:64022459 synonymous SNV . 0 22 hm5C_associated_SNPs_9256 0 0 1 PPIG POSTAR2 ENCODE chr11:64022407-64022465
64251 chr11 64033454 64033454 1 + G A rs34677667 64033434 + 64033414 64033454 41 ATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAG ATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAA < 41bp 1 0.640721046738886 1 0.826090216636658 experiment 0.718557906522228 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64033434 chr11:64033454 synonymous SNV . 0 41 hm5C_associated_SNPs_9258 0 0 2 DDX6 POSTAR2 ENCODE chr11:64033421-64033461
64251 chr11 64085785 64085785 1 + A C rs7938623 64085786 + 64085766 64085806 41 GCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTC GCAGCGGCAGCAAGACGGTCCAGTGAAGGAGAGTGGGCGTC < 41bp 1 0.609453183853867 1 0.436954915523529 experiment 0.781093632292265 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085786 chr11:64085785 nonsynonymous SNV 0.000 0 20 hm5C_associated_SNPs_9260 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:64085780-64085800
64251 chr11 64118648 64118648 1 + C A rs74794644 64118643 + 64118623 64118663 41 TCCTTGCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAA TCCTTGCAGCTGCGCCAGGGCCCCGAGGGGCTGGGGCCCAA < 41bp 1 0.34414626679963 1 0.307618260383606 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118643 chr11:64118648 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_9261 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118644 + 64118624 64118664 41 CCTTGCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAA CCTTGCAGCTGCGCCAGGGCCCCGAGGGGCTGGGGCCCAAA < 41bp 1 0.638652732247555 1 0.491565108299255 experiment 0.722694535504889 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118644 chr11:64118648 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_9262 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118645 + 64118625 64118665 41 CTTGCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAA CTTGCAGCTGCGCCAGGGCCCCGAGGGGCTGGGGCCCAAAA < 41bp 1 0.344016457781117 1 0.726678848266602 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118645 chr11:64118648 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_9263 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118646 + 64118626 64118666 41 TTGCAGCTGCGCCAGGGCCCCGCGGGGCTGGGGCCCAAAAA TTGCAGCTGCGCCAGGGCCCCGAGGGGCTGGGGCCCAAAAA < 41bp 1 0.696039920172116 1 0.930471420288086 experiment 0.607920159655768 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118646 chr11:64118648 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_9264 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118659 + 64118639 64118679 41 AGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCT AGGGCCCCGAGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCT < 41bp 1 0.285406871069536 1 0.222722381353378 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118659 chr11:64118648 nonsynonymous SNV 0.000 0 10 hm5C_associated_SNPs_9265 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118660 + 64118640 64118680 41 GGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTC GGGCCCCGAGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTC < 41bp 1 0.280100005710663 1 0.2069251537323 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118660 chr11:64118648 nonsynonymous SNV 0.000 0 9 hm5C_associated_SNPs_9266 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118648 64118648 1 + C A rs74794644 64118661 + 64118641 64118681 41 GGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCA GGCCCCGAGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCA < 41bp 1 0.493430113040393 1 0.782831370830536 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118661 chr11:64118648 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_9267 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64132904 64132904 1 + C G rs139579817 64132923 + 64132903 64132943 41 GCAGCCCCCCACCTGGGGACCCCCGAATCTTTCAGGTGAGG GGAGCCCCCCACCTGGGGACCCCCGAATCTTTCAGGTGAGG < 41bp 1 0.0998332173244117 1 0.104589462280273 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64132923 chr11:64132904 synonymous SNV . 0 2 hm5C_associated_SNPs_9268 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:64132887-64132917
64251 chr11 64879480 64879480 1 + C T rs182060338 64879492 + 64879472 64879512 41 CGGCGGAGCGGAGACCATGGCCCCCACTCAGGGCCCCCGGG CGGCGGAGTGGAGACCATGGCCCCCACTCAGGGCCCCCGGG < 41bp 1 0.149607688138056 1 0.141787767410278 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM7SF2 ENSG00000149809 UTR5 Human protein_coding chr11:64879492 chr11:64879480 . . 0 9 hm5C_associated_SNPs_9283 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:64879450-64879480
64251 chr11 64885102 64885102 1 - G A rs34393594 64885118 - 64885098 64885138 41 GGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTCT GGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGTTTCT < 41bp 1 0.635641659970093 1 0.681752562522888 experiment 0.728716680059814 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64885118 chr11:64885102 synonymous SNV . 0 37 hm5C_associated_SNPs_9287 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:64885101-64885102
64251 chr11 64885102 64885102 1 - G A rs34393594 64885119 - 64885099 64885139 41 CGGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTC CGGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGTTTC < 41bp 1 0.455384097384601 1 0.636725306510925 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNHIT2 ENSG00000174276 CDS Human protein_coding chr11:64885119 chr11:64885102 synonymous SNV . 0 38 hm5C_associated_SNPs_9288 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:64885101-64885102
64251 chr11 64885138 64885138 1 - C G rs115738452 64885118 - 64885098 64885138 41 GGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTCT CGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTCT < 41bp 1 0.646992666290587 1 0.644603073596954 experiment 0.706014667418826 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNHIT2 ENSG00000174276 UTR5 Human protein_coding chr11:64885118 chr11:64885138 . . 0 1 hm5C_associated_SNPs_9289 0 0 1 DDX3X POSTAR2 ENCODE chr11:64884970-64885146
64251 chr11 64885138 64885138 1 - C G rs115738452 64885119 - 64885099 64885139 41 CGGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTC CCGTGCCAGTTGCCATGGAGCCGGCCGGGCCCTGTGGCTTC < 41bp 1 0.525065796457678 1 0.683966815471649 experiment 0.949868407084644 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNHIT2 ENSG00000174276 UTR5 Human protein_coding chr11:64885119 chr11:64885138 . . 0 2 hm5C_associated_SNPs_9290 0 0 1 DDX3X POSTAR2 ENCODE chr11:64884970-64885146
64251 chr11 64950970 64950970 1 + C G rs17583 64950967 + 64950947 64950987 41 GACTGCTGGCTCTTGGCGGCCATCGCCTCCCTCACTCTCAA GACTGCTGGCTCTTGGCGGCCATGGCCTCCCTCACTCTCAA < 41bp 1 0.389570174837439 1 0.234102785587311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950967 chr11:64950970 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_9291 0 0 1 PPIG POSTAR2 ENCODE chr11:64950941-64950975
64251 chr11 64979046 64979046 1 + C T rs187717697 64979043 + 64979023 64979063 41 TTGTTCCTGCCTCGGGACAGCCCCGGGTTTCCCCAGCATCC TTGTTCCTGCCTCGGGACAGCCCTGGGTTTCCCCAGCATCC < 41bp 1 0.270651892157862 1 0.170636862516403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 UTR3 Human protein_coding chr11:64979043 chr11:64979046 . . 0 24 hm5C_associated_SNPs_9292 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64979013-64979050
64251 chr11 64979061 64979061 1 + T A rs552659092 64979043 + 64979023 64979063 41 TTGTTCCTGCCTCGGGACAGCCCCGGGTTTCCCCAGCATCC TTGTTCCTGCCTCGGGACAGCCCCGGGTTTCCCCAGCAACC < 41bp 1 0.395091874776646 1 0.242812693119049 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 UTR3 Human protein_coding chr11:64979043 chr11:64979061 . . 0 39 hm5C_associated_SNPs_9293 0 0 8 DDX24 POSTAR2 ENCODE chr11:64979018-64979070
64251 chr11 65063455 65063455 1 + C T rs34997862 65063444 + 65063424 65063464 41 TCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAAGGTA TCCTCATCATCCCGTCAGAGCTGAGGTACTTTGTGAAGGTA < 41bp 1 0.375710316429751 1 0.169110208749771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65063444 chr11:65063455 synonymous SNV . 0 32 hm5C_associated_SNPs_9294 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65063425-65063458
64251 chr11 65178992 65178992 1 + G A rs557821801 65178999 + 65178979 65179019 41 TTTTGGGCCCGGGGCCATGCCCGGGCTGTGCAAAGCTGGCC TTTTGGGCCCGGGACCATGCCCGGGCTGTGCAAAGCTGGCC < 41bp 1 0.601121812308495 1 0.360258340835571 experiment 0.79775637538301 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65178999 chr11:65178992 . . 0 14 hm5C_associated_SNPs_9295 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65178969-65178993
64251 chr11 65179416 65179416 1 + A G rs79588035 65179407 + 65179387 65179427 41 TCTGAGGAGGGTAGGAGGGGCCTCCCTGGATTGAACCGGGA TCTGAGGAGGGTAGGAGGGGCCTCCCTGGGTTGAACCGGGA < 41bp 1 0.0658201118862929 1 0.148212671279907 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65179407 chr11:65179416 . . 0 30 hm5C_associated_SNPs_9297 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:65179415-65179416
64251 chr11 65180536 65180536 1 + C T rs148625495 65180523 + 65180503 65180543 41 CTGTTGCCCAGGCAGGAGTGCAGTGGCGCATCTCGGCTCAC CTGTTGCCCAGGCAGGAGTGCAGTGGCGCATCTTGGCTCAC < 41bp 1 0.378205358322751 1 0.264200508594513 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180523 chr11:65180536 . . 0 34 hm5C_associated_SNPs_9298 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:65180520-65180540
64251 chr11 65180536 65180536 1 + C T rs148625495 65180529 + 65180509 65180549 41 CCCAGGCAGGAGTGCAGTGGCGCATCTCGGCTCACTGCAAC CCCAGGCAGGAGTGCAGTGGCGCATCTTGGCTCACTGCAAC < 41bp 1 0.486256144452407 1 0.319924503564835 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180529 chr11:65180536 . . 0 28 hm5C_associated_SNPs_9299 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:65180520-65180540
64251 chr11 65180604 65180604 1 + T A rs11551353 65180591 + 65180571 65180611 41 TGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCATGCC TGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGAGCATGCC < 41bp 1 0.706474043455492 1 0.488993763923645 experiment 0.587051913089015 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180591 chr11:65180604 . . 0 34 hm5C_associated_SNPs_9300 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65180600-65180632
64251 chr11 65180604 65180604 1 + T A rs11551353 65180623 + 65180603 65180643 41 GTGCATGCCACCAGGCCCCGCTGATTTTTGTATTTTTAGTA GAGCATGCCACCAGGCCCCGCTGATTTTTGTATTTTTAGTA < 41bp 1 0.181367470642203 1 0.133754372596741 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180623 chr11:65180604 . . 0 2 hm5C_associated_SNPs_9301 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65180600-65180632
64251 chr11 65180613 65180613 1 + C T rs147500819 65180623 + 65180603 65180643 41 GTGCATGCCACCAGGCCCCGCTGATTTTTGTATTTTTAGTA GTGCATGCCATCAGGCCCCGCTGATTTTTGTATTTTTAGTA < 41bp 1 0.180836787776263 1 0.142960220575333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65180623 chr11:65180613 . . 0 11 hm5C_associated_SNPs_9302 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65180600-65180632
64251 chr11 65190887 65190887 1 + C A rs79376422 65190874 + 65190854 65190894 41 GGTATGTAATTTTCGCTCGGCCTGGGACGGGGCCCAGGCCG GGTATGTAATTTTCGCTCGGCCTGGGACGGGGCACAGGCCG < 41bp 1 0.235524907211468 1 0.241807460784912 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190874 chr11:65190887 . . 0 34 hm5C_associated_SNPs_9303 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190886 + 65190866 65190906 41 TCGCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGG TCGCTCGGCCTGGGACGGGGCACAGGCCGGGCCCAGCCTGG < 41bp 1 0.524728984108208 1 0.541712641716003 experiment 0.950542031783584 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190886 chr11:65190887 . . 0 22 hm5C_associated_SNPs_9304 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190888 + 65190868 65190908 41 GCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTG GCTCGGCCTGGGACGGGGCACAGGCCGGGCCCAGCCTGGTG < 41bp 1 0.630980922438571 1 0.499689549207687 experiment 0.738038155122859 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190888 chr11:65190887 . . 0 20 hm5C_associated_SNPs_9305 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190892 + 65190872 65190912 41 GGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGC GGCCTGGGACGGGGCACAGGCCGGGCCCAGCCTGGTGGAGC < 41bp 1 0.588664024243135 1 0.817917346954346 experiment 0.82267195151373 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190892 chr11:65190887 . . 0 16 hm5C_associated_SNPs_9306 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190893 + 65190873 65190913 41 GCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCG GCCTGGGACGGGGCACAGGCCGGGCCCAGCCTGGTGGAGCG < 41bp 1 0.642588093536376 1 0.85949695110321 experiment 0.714823812927247 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190893 chr11:65190887 . . 0 15 hm5C_associated_SNPs_9307 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190897 + 65190877 65190917 41 GGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCA GGGACGGGGCACAGGCCGGGCCCAGCCTGGTGGAGCGTCCA < 41bp 1 0.262981941851825 1 0.108483761548996 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190897 chr11:65190887 . . 0 11 hm5C_associated_SNPs_9308 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190898 + 65190878 65190918 41 GGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAG GGACGGGGCACAGGCCGGGCCCAGCCTGGTGGAGCGTCCAG < 41bp 1 0.309601311889283 1 0.111527174711227 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190898 chr11:65190887 . . 0 10 hm5C_associated_SNPs_9309 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190887 65190887 1 + C A rs79376422 65190899 + 65190879 65190919 41 GACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAGG GACGGGGCACAGGCCGGGCCCAGCCTGGTGGAGCGTCCAGG < 41bp 1 0.420154131569223 1 0.0944487750530243 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190899 chr11:65190887 . . 0 9 hm5C_associated_SNPs_9310 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65190741-65190888
64251 chr11 65190894 65190894 1 + G A rs144837246 65190874 + 65190854 65190894 41 GGTATGTAATTTTCGCTCGGCCTGGGACGGGGCCCAGGCCG GGTATGTAATTTTCGCTCGGCCTGGGACGGGGCCCAGGCCA < 41bp 1 0.260346218983248 1 0.368498086929321 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190874 chr11:65190894 . . 0 41 hm5C_associated_SNPs_9311 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190886 + 65190866 65190906 41 TCGCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGG TCGCTCGGCCTGGGACGGGGCCCAGGCCAGGCCCAGCCTGG < 41bp 1 0.258635697270207 1 0.32276976108551 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190886 chr11:65190894 . . 0 29 hm5C_associated_SNPs_9312 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190887 + 65190867 65190907 41 CGCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGT CGCTCGGCCTGGGACGGGGCCCAGGCCAGGCCCAGCCTGGT < 41bp 1 0.283859714465823 1 0.636794149875641 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190887 chr11:65190894 . . 0 28 hm5C_associated_SNPs_9313 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190888 + 65190868 65190908 41 GCTCGGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTG GCTCGGCCTGGGACGGGGCCCAGGCCAGGCCCAGCCTGGTG < 41bp 1 0.626524989106298 1 0.733105659484863 experiment 0.746950021787403 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190888 chr11:65190894 . . 0 27 hm5C_associated_SNPs_9314 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190892 + 65190872 65190912 41 GGCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGC GGCCTGGGACGGGGCCCAGGCCAGGCCCAGCCTGGTGGAGC < 41bp 1 0.412906335627112 1 0.597708523273468 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190892 chr11:65190894 . . 0 23 hm5C_associated_SNPs_9315 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190893 + 65190873 65190913 41 GCCTGGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCG GCCTGGGACGGGGCCCAGGCCAGGCCCAGCCTGGTGGAGCG < 41bp 1 0.594230229169059 1 0.728268623352051 experiment 0.811539541661883 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190893 chr11:65190894 . . 0 22 hm5C_associated_SNPs_9316 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190897 + 65190877 65190917 41 GGGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCA GGGACGGGGCCCAGGCCAGGCCCAGCCTGGTGGAGCGTCCA < 41bp 1 0.328478491049268 1 0.0762658715248108 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190897 chr11:65190894 . . 0 18 hm5C_associated_SNPs_9317 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190898 + 65190878 65190918 41 GGACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAG GGACGGGGCCCAGGCCAGGCCCAGCCTGGTGGAGCGTCCAG < 41bp 1 0.352483288913982 1 0.131757497787476 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190898 chr11:65190894 . . 0 17 hm5C_associated_SNPs_9318 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65190894 65190894 1 + G A rs144837246 65190899 + 65190879 65190919 41 GACGGGGCCCAGGCCGGGCCCAGCCTGGTGGAGCGTCCAGG GACGGGGCCCAGGCCAGGCCCAGCCTGGTGGAGCGTCCAGG < 41bp 1 0.406671188200434 1 0.077030211687088 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65190899 chr11:65190894 . . 0 16 hm5C_associated_SNPs_9319 0 0 13 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65190859-65190895
64251 chr11 65191922 65191922 1 + A G rs1938689 65191928 + 65191908 65191948 41 TTGATGCCTTGTAGATGGAGCTTGCAGATGGAGCCCCGTGA TTGATGCCTTGTAGGTGGAGCTTGCAGATGGAGCCCCGTGA < 41bp 1 0.0632315780860177 1 0.101286560297012 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65191928 chr11:65191922 . . 0 15 hm5C_associated_SNPs_9320 0 0 47 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65191800-65191940
64251 chr11 65199635 65199635 1 + C T rs192076013 65199650 + 65199630 65199670 41 ACTCTCCTTTGGGTAGATACCCAGTAGTGGGATTGCTGGAT ACTCTTCTTTGGGTAGATACCCAGTAGTGGGATTGCTGGAT < 41bp 1 0.0572440681815212 1 0.655812084674835 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEAT1 ENSG00000245532 ncRNA_exonic Human lincRNA chr11:65199650 chr11:65199635 . . 0 6 hm5C_associated_SNPs_9321 0 0 38 PTBP1 POSTAR2 GSE19323,GSM480476 chr11:65199560-65199640
64251 chr11 65267108 65267108 1 + T C rs11540782 65267103 + 65267083 65267123 41 TTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGT TTGGGAGTGGTAGGATGAAACAATTCGGAGAAGATAGAAGT < 41bp 1 0.16668851376012 1 0.53546530008316 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267103 chr11:65267108 . . 0 26 hm5C_associated_SNPs_9322 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr11:65267100-65267160
64251 chr11 65267892 65267892 1 + G A rs528557696 65267898 + 65267878 65267918 41 CAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACA CAGAAGTGGATTCAATGAATCTAGGAAGACAGCAGCAGACA < 41bp 1 0.791806490647625 1 0.527490019798279 experiment 0.41638701870475 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267898 chr11:65267892 . . 0 15 hm5C_associated_SNPs_9323 0 0 73 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267820-65267900
64251 chr11 65267897 65267897 1 + T C rs142149322 65267898 + 65267878 65267918 41 CAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACA CAGAAGTGGATTCAGTGAACCTAGGAAGACAGCAGCAGACA < 41bp 1 0.747769668308081 1 0.427713364362717 experiment 0.504460663383838 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267898 chr11:65267897 . . 0 20 hm5C_associated_SNPs_9324 0 0 77 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267820-65267900
64251 chr11 65267965 65267965 1 + C T rs181032965 65267961 + 65267941 65267981 41 ATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTC ATGAAGCTAGGACTGAGGAGCAAGTGAGCAAGCAGCAGTTC < 41bp 1 0.683773052960088 1 0.228575855493546 experiment 0.632453894079824 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267961 chr11:65267965 . . 0 25 hm5C_associated_SNPs_9325 0 0 62 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65268198 65268198 1 + G A rs7927113 65268185 + 65268165 65268205 41 AGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGT AGGCGTTGTGCGTAGAGGATCCTAGACCAGCATACCAGTGT < 41bp 1 0.223459893830076 1 0.120077013969421 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268185 chr11:65268198 . . 0 34 hm5C_associated_SNPs_9326 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268198 65268198 1 + G A rs7927113 65268191 + 65268171 65268211 41 TGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAG TGTGCGTAGAGGATCCTAGACCAGCATACCAGTGTGCCAAG < 41bp 1 0.483762664884478 1 0.084882527589798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268191 chr11:65268198 . . 0 28 hm5C_associated_SNPs_9327 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268198 65268198 1 + G A rs7927113 65268195 + 65268175 65268215 41 CGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCA CGTAGAGGATCCTAGACCAGCATACCAGTGTGCCAAGGCCA < 41bp 1 0.184441705291428 1 0.0403631627559662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268195 chr11:65268198 . . 0 24 hm5C_associated_SNPs_9328 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268198 65268198 1 + G A rs7927113 65268207 + 65268187 65268227 41 TAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGA TAGACCAGCATACCAGTGTGCCAAGGCCACAGGGAAAGCGA < 41bp 1 0.386108097464826 1 0.196993678808212 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268207 chr11:65268198 . . 0 12 hm5C_associated_SNPs_9329 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268198 65268198 1 + G A rs7927113 65268208 + 65268188 65268228 41 AGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAG AGACCAGCATACCAGTGTGCCAAGGCCACAGGGAAAGCGAG < 41bp 1 0.730660369557022 1 0.436343878507614 experiment 0.538679260885956 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268208 chr11:65268198 . . 0 11 hm5C_associated_SNPs_9330 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65273622 65273622 1 + G A rs576087101 65273607 + 65273587 65273627 41 AGATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTT AGATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACAGGGTT < 41bp 1 0.416627019630363 1 0.471578925848007 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;MASCRNA;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273607 chr11:65273622 . . 0 36 hm5C_associated_SNPs_9331 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr11:65273619-65273640
64251 chr11 65273622 65273622 1 + G A rs576087101 65273608 + 65273588 65273628 41 GATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTTC GATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACAGGGTTC < 41bp 1 0.604444893205852 1 0.48534032702446 experiment 0.791110213588297 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;MASCRNA;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273608 chr11:65273622 . . 0 35 hm5C_associated_SNPs_9332 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr11:65273619-65273640
64251 chr11 65292585 65292585 1 + C G rs376947297 65292572 + 65292552 65292592 41 CCGCCCCGCCCCGGCTCGGGCGGCCGGAGGACCCGGAGCTA CCGCCCCGCCCCGGCTCGGGCGGCCGGAGGACCGGGAGCTA < 41bp 1 0.669197729719528 1 0.6790611743927 experiment 0.661604540560944 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SCYL1 ENSG00000142186 UTR5 Human protein_coding chr11:65292572 chr11:65292585 . . 0 34 hm5C_associated_SNPs_9333 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:65292580-65292600
64251 chr11 65340045 65340045 1 + T G rs576638846 65340055 + 65340035 65340075 41 GCGGCTGGGCTCCGGCGGGGCCGCGGGGTGCGGGGCCTGCG GCGGCTGGGCGCCGGCGGGGCCGCGGGGTGCGGGGCCTGCG < 41bp 1 0.714524522753069 1 0.458010703325272 experiment 0.570950954493861 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM89B ENSG00000176973;ENSG00000173465 UTR5;UTR3 Human other chr11:65340055 chr11:65340045 . . 0 11 hm5C_associated_SNPs_9336 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:65340021-65340066
64251 chr11 65341405 65341405 1 + G A rs543598842 65341401 + 65341381 65341421 41 CTCAGCCTTGCGGTGGGGCCCGAAGCATCTTCCCTTCCGCT CTCAGCCTTGCGGTGGGGCCCGAAACATCTTCCCTTCCGCT < 41bp 1 0.520556022897277 1 0.372267246246338 experiment 0.958887954205445 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM89B ENSG00000173465;ENSG00000176973 UTR3 Human other chr11:65341401 chr11:65341405 . . 0 25 hm5C_associated_SNPs_9337 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65341402-65341476
64251 chr11 65352918 65352918 1 + G A rs185143614 65352925 + 65352905 65352945 41 ACGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGC ACGGGGAGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGC < 41bp 1 0.175016227892929 1 0.0831502377986908 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352925 chr11:65352918 synonymous SNV . 0 14 hm5C_associated_SNPs_9338 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352926 + 65352906 65352946 41 CGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCT CGGGGAGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCT < 41bp 1 0.248231116440495 1 0.0968926846981049 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352926 chr11:65352918 synonymous SNV . 0 13 hm5C_associated_SNPs_9339 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352927 + 65352907 65352947 41 GGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTC GGGGAGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTC < 41bp 1 0.268496969020553 1 0.120733231306076 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352927 chr11:65352918 synonymous SNV . 0 12 hm5C_associated_SNPs_9340 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352928 + 65352908 65352948 41 GGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCC GGGAGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCC < 41bp 1 0.164624867987784 1 0.29462131857872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352928 chr11:65352918 synonymous SNV . 0 11 hm5C_associated_SNPs_9341 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352929 + 65352909 65352949 41 GGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCT GGAGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCCT < 41bp 1 0.390992523024629 1 0.370498836040497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352929 chr11:65352918 synonymous SNV . 0 10 hm5C_associated_SNPs_9342 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352931 + 65352911 65352951 41 AGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTC AGCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTC < 41bp 1 0.379399517319321 1 0.218659788370132 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352931 chr11:65352918 synonymous SNV . 0 8 hm5C_associated_SNPs_9343 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352932 + 65352912 65352952 41 GCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCT GCCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCT < 41bp 1 0.27203969134139 1 0.524928212165833 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352932 chr11:65352918 synonymous SNV . 0 7 hm5C_associated_SNPs_9344 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352933 + 65352913 65352953 41 CCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTC CCCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTC < 41bp 1 0.465713470062332 1 0.406751304864883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352933 chr11:65352918 synonymous SNV . 0 6 hm5C_associated_SNPs_9345 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352918 65352918 1 + G A rs185143614 65352934 + 65352914 65352954 41 CCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTCC CCGGATCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTCC < 41bp 1 0.565633492378702 1 0.826036691665649 experiment 0.868733015242595 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352934 chr11:65352918 synonymous SNV . 0 5 hm5C_associated_SNPs_9346 0 0 4 DHX30 POSTAR2 ENCODE chr11:65352873-65352943
64251 chr11 65352939 65352939 1 + G A rs373052924 65352925 + 65352905 65352945 41 ACGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGC ACGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGC < 41bp 1 0.20361552613393 1 0.147020429372787 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352925 chr11:65352939 synonymous SNV . 0 35 hm5C_associated_SNPs_9347 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352926 + 65352906 65352946 41 CGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCT CGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCT < 41bp 1 0.277750292715973 1 0.168738633394241 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352926 chr11:65352939 synonymous SNV . 0 34 hm5C_associated_SNPs_9348 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352927 + 65352907 65352947 41 GGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTC GGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTC < 41bp 1 0.314405980739842 1 0.227662682533264 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352927 chr11:65352939 synonymous SNV . 0 33 hm5C_associated_SNPs_9349 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352928 + 65352908 65352948 41 GGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCC GGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCC < 41bp 1 0.171635020068459 1 0.35381668806076 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352928 chr11:65352939 synonymous SNV . 0 32 hm5C_associated_SNPs_9350 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352929 + 65352909 65352949 41 GGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCT GGAGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCCT < 41bp 1 0.465799805791766 1 0.328014016151428 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352929 chr11:65352939 synonymous SNV . 0 31 hm5C_associated_SNPs_9351 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352931 + 65352911 65352951 41 AGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTC AGCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCCTTC < 41bp 1 0.388506298303058 1 0.289534866809845 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352931 chr11:65352939 synonymous SNV . 0 29 hm5C_associated_SNPs_9352 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352932 + 65352912 65352952 41 GCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCT GCCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCCTTCT < 41bp 1 0.238250612043918 1 0.69917356967926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352932 chr11:65352939 synonymous SNV . 0 28 hm5C_associated_SNPs_9353 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352933 + 65352913 65352953 41 CCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTC CCCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCCTTCTC < 41bp 1 0.441888212251069 1 0.473346561193466 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352933 chr11:65352939 synonymous SNV . 0 27 hm5C_associated_SNPs_9354 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352934 + 65352914 65352954 41 CCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTCC CCGGGTCGGTGCCCCCGCCCCGCGCACACGGCTCCTTCTCC < 41bp 1 0.495880243421541 1 0.739211678504944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352934 chr11:65352939 synonymous SNV . 0 26 hm5C_associated_SNPs_9355 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352939 65352939 1 + G A rs373052924 65352955 + 65352935 65352975 41 GCGCGCACGGCTCCTTCTCCCACGTGCGCGACGCGGACCTG GCGCACACGGCTCCTTCTCCCACGTGCGCGACGCGGACCTG < 41bp 1 0.797664914516396 1 0.271432220935822 experiment 0.404670170967207 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352955 chr11:65352939 synonymous SNV . 0 5 hm5C_associated_SNPs_9356 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352925 + 65352905 65352945 41 ACGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGC ACGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGC < 41bp 1 0.194800099682094 1 0.151617050170898 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352925 chr11:65352942 synonymous SNV . 0 38 hm5C_associated_SNPs_9357 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352926 + 65352906 65352946 41 CGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCT CGGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCT < 41bp 1 0.273913647906845 1 0.337616562843323 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352926 chr11:65352942 synonymous SNV . 0 37 hm5C_associated_SNPs_9358 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352927 + 65352907 65352947 41 GGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTC GGGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTC < 41bp 1 0.284948747008618 1 0.189030051231384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352927 chr11:65352942 synonymous SNV . 0 36 hm5C_associated_SNPs_9359 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352928 + 65352908 65352948 41 GGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCC GGGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCC < 41bp 1 0.170676405690929 1 0.487572610378265 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352928 chr11:65352942 synonymous SNV . 0 35 hm5C_associated_SNPs_9360 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352929 + 65352909 65352949 41 GGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCT GGAGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCCT < 41bp 1 0.431561085623348 1 0.358152329921722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352929 chr11:65352942 synonymous SNV . 0 34 hm5C_associated_SNPs_9361 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352931 + 65352911 65352951 41 AGCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTC AGCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCCTTC < 41bp 1 0.452973047661894 1 0.246583461761475 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352931 chr11:65352942 synonymous SNV . 0 32 hm5C_associated_SNPs_9362 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352932 + 65352912 65352952 41 GCCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCT GCCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCCTTCT < 41bp 1 0.216764205136322 1 0.429115056991577 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352932 chr11:65352942 synonymous SNV . 0 31 hm5C_associated_SNPs_9363 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352933 + 65352913 65352953 41 CCCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTC CCCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCCTTCTC < 41bp 1 0.410647726408323 1 0.196507841348648 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352933 chr11:65352942 synonymous SNV . 0 30 hm5C_associated_SNPs_9364 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65352942 65352942 1 + C T rs536332698 65352934 + 65352914 65352954 41 CCGGGTCGGTGCCCCCGCCCCGCGCGCACGGCTCCTTCTCC CCGGGTCGGTGCCCCCGCCCCGCGCGCATGGCTCCTTCTCC < 41bp 1 0.57132588374913 1 0.720723688602448 experiment 0.857348232501739 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352934 chr11:65352942 synonymous SNV . 0 29 hm5C_associated_SNPs_9365 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65352939-65352970
64251 chr11 65386206 65386206 1 + C G rs1193851 65386204 + 65386184 65386224 41 TCCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG TCCTGCTACTCCCCTGAGAGCTGCCGGGGTGCAGCAGGGGG < 41bp 1 0.287595161168715 1 0.263397336006165 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386204 chr11:65386206 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_9366 0 0 3 DDX24 POSTAR2 ENCODE chr11:65386155-65386210
64251 chr11 65392695 65392695 1 + C T rs1205259 65392705 + 65392685 65392725 41 TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG TCTGTGGCCTTCTGGTGGCACTGTCCTACCACCTGAGCCGG < 41bp 1 0.122264893552876 1 0.336008191108704 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392705 chr11:65392695 synonymous SNV . 0 11 hm5C_associated_SNPs_9367 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65392679-65392707
64251 chr11 65392704 65392704 1 + A G rs187327032 65392705 + 65392685 65392725 41 TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG TCTGTGGCCTCCTGGTGGCGCTGTCCTACCACCTGAGCCGG < 41bp 1 0.101832033498515 1 0.470705837011337 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392705 chr11:65392704 synonymous SNV . 0 20 hm5C_associated_SNPs_9368 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65392679-65392707
64251 chr11 65392725 65392725 1 + G A rs61742865 65392705 + 65392685 65392725 41 TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGA < 41bp 1 0.118622157593583 1 0.441289871931076 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392705 chr11:65392725 synonymous SNV . 0 41 hm5C_associated_SNPs_9369 0 0 2 EIF3D POSTAR2 ENCODE chr11:65392666-65392740
64251 chr11 65402862 65402862 1 + C T rs200153485 65402842 + 65402822 65402862 41 CCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTCC CCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTCT < 41bp 1 0.0755983260150582 1 0.321373760700226 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402842 chr11:65402862 synonymous SNV . 0 41 hm5C_associated_SNPs_9370 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65658714 65658714 1 + C G rs148802656 65658701 + 65658681 65658721 41 GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGG GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCGCCAGCGG < 41bp 1 0.248493030292322 1 0.335472524166107 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658701 chr11:65658714 nonsynonymous SNV 0.640 0 34 hm5C_associated_SNPs_9373 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658714 65658714 1 + C G rs148802656 65658702 + 65658682 65658722 41 CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGGC CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCGCCAGCGGC < 41bp 1 0.281000370609653 1 0.142485648393631 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658702 chr11:65658714 nonsynonymous SNV 0.640 0 33 hm5C_associated_SNPs_9374 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658714 65658714 1 + C G rs148802656 65658715 + 65658695 65658735 41 ATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAG ATGGGGCCCCCGCGGCGGCGCCAGCGGCGCCGGGGGATCAG < 41bp 1 0.372109892944073 1 0.460444688796997 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658715 chr11:65658714 nonsynonymous SNV 0.640 0 20 hm5C_associated_SNPs_9375 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658714 65658714 1 + C G rs148802656 65658716 + 65658696 65658736 41 TGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAGG TGGGGCCCCCGCGGCGGCGCCAGCGGCGCCGGGGGATCAGG < 41bp 1 0.713856377002451 1 0.760361433029175 experiment 0.572287245995097 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658716 chr11:65658714 nonsynonymous SNV 0.640 0 19 hm5C_associated_SNPs_9376 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658701 + 65658681 65658721 41 GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGG GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCCGCGG < 41bp 1 0.28283647312045 1 0.266241788864136 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658701 chr11:65658717 nonsynonymous SNV 0.042 0 37 hm5C_associated_SNPs_9377 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658702 + 65658682 65658722 41 CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGGC CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCCGCGGC < 41bp 1 0.332715917978412 1 0.186947256326675 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658702 chr11:65658717 nonsynonymous SNV 0.042 0 36 hm5C_associated_SNPs_9378 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658713 + 65658693 65658733 41 GAATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATC GAATGGGGCCCCCGCGGCGGCCCCCGCGGCGCCGGGGGATC < 41bp 1 0.212136967168823 1 0.18953663110733 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658713 chr11:65658717 nonsynonymous SNV 0.042 0 25 hm5C_associated_SNPs_9379 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658714 + 65658694 65658734 41 AATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCA AATGGGGCCCCCGCGGCGGCCCCCGCGGCGCCGGGGGATCA < 41bp 1 0.381544699660834 1 0.415077209472656 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658714 chr11:65658717 nonsynonymous SNV 0.042 0 24 hm5C_associated_SNPs_9380 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658715 + 65658695 65658735 41 ATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAG ATGGGGCCCCCGCGGCGGCCCCCGCGGCGCCGGGGGATCAG < 41bp 1 0.41690190469043 1 0.254872620105743 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658715 chr11:65658717 nonsynonymous SNV 0.042 0 23 hm5C_associated_SNPs_9381 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658717 65658717 1 + A C rs539326529 65658716 + 65658696 65658736 41 TGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAGG TGGGGCCCCCGCGGCGGCCCCCGCGGCGCCGGGGGATCAGG < 41bp 1 0.518012988766011 1 0.516310632228851 experiment 0.963974022467978 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658716 chr11:65658717 nonsynonymous SNV 0.042 0 22 hm5C_associated_SNPs_9382 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658701 + 65658681 65658721 41 GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGG GCGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGA < 41bp 1 0.257945853758902 1 0.321434080600739 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658701 chr11:65658721 nonsynonymous SNV 0.101 0 41 hm5C_associated_SNPs_9383 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658702 + 65658682 65658722 41 CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGGC CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGAC < 41bp 1 0.306039226986629 1 0.152186214923859 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658702 chr11:65658721 nonsynonymous SNV 0.101 0 40 hm5C_associated_SNPs_9384 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658713 + 65658693 65658733 41 GAATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATC GAATGGGGCCCCCGCGGCGGCCCCAGCGACGCCGGGGGATC < 41bp 1 0.557479883752424 1 0.202114075422287 experiment 0.885040232495152 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658713 chr11:65658721 nonsynonymous SNV 0.101 0 29 hm5C_associated_SNPs_9385 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658714 + 65658694 65658734 41 AATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCA AATGGGGCCCCCGCGGCGGCCCCAGCGACGCCGGGGGATCA < 41bp 1 0.309544121740178 1 0.476855576038361 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658714 chr11:65658721 nonsynonymous SNV 0.101 0 28 hm5C_associated_SNPs_9386 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658715 + 65658695 65658735 41 ATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAG ATGGGGCCCCCGCGGCGGCCCCAGCGACGCCGGGGGATCAG < 41bp 1 0.379485450097482 1 0.275589346885681 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658715 chr11:65658721 nonsynonymous SNV 0.101 0 27 hm5C_associated_SNPs_9387 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658721 65658721 1 + G A rs199500126 65658716 + 65658696 65658736 41 TGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAGG TGGGGCCCCCGCGGCGGCCCCAGCGACGCCGGGGGATCAGG < 41bp 1 0.693789737324848 1 0.74153208732605 experiment 0.612420525350303 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658716 chr11:65658721 nonsynonymous SNV 0.101 0 26 hm5C_associated_SNPs_9388 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658722 65658722 1 + C A rs75556285 65658702 + 65658682 65658722 41 CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGGC CGCTGGGCGAAGAATGGGGCCCCCGCGGCGGCCCCAGCGGA < 41bp 1 0.286477467175827 1 0.173403441905975 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658702 chr11:65658722 synonymous SNV . 0 41 hm5C_associated_SNPs_9389 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658722 65658722 1 + C A rs75556285 65658713 + 65658693 65658733 41 GAATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATC GAATGGGGCCCCCGCGGCGGCCCCAGCGGAGCCGGGGGATC < 41bp 1 0.5731813490546 1 0.463027775287628 experiment 0.853637301890801 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658713 chr11:65658722 synonymous SNV . 0 30 hm5C_associated_SNPs_9390 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658722 65658722 1 + C A rs75556285 65658714 + 65658694 65658734 41 AATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCA AATGGGGCCCCCGCGGCGGCCCCAGCGGAGCCGGGGGATCA < 41bp 1 0.329962558615581 1 0.390478193759918 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658714 chr11:65658722 synonymous SNV . 0 29 hm5C_associated_SNPs_9391 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658722 65658722 1 + C A rs75556285 65658715 + 65658695 65658735 41 ATGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAG ATGGGGCCCCCGCGGCGGCCCCAGCGGAGCCGGGGGATCAG < 41bp 1 0.371063243443805 1 0.384809136390686 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658715 chr11:65658722 synonymous SNV . 0 28 hm5C_associated_SNPs_9392 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65658722 65658722 1 + C A rs75556285 65658716 + 65658696 65658736 41 TGGGGCCCCCGCGGCGGCCCCAGCGGCGCCGGGGGATCAGG TGGGGCCCCCGCGGCGGCCCCAGCGGAGCCGGGGGATCAGG < 41bp 1 0.776837849117408 1 0.74604856967926 experiment 0.446324301765184 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control CCDC85B ENSG00000175602 CDS Human protein_coding chr11:65658716 chr11:65658722 synonymous SNV . 0 27 hm5C_associated_SNPs_9393 0 0 2 DDX55 POSTAR2 ENCODE chr11:65658691-65658769
64251 chr11 65733393 65733393 1 + C T rs688862 65733404 + 65733384 65733424 41 GGGCCTCACCGTGGAGCATGCCATTGATTCCTTCCGAGAAG GGGCCTCACTGTGGAGCATGCCATTGATTCCTTCCGAGAAG < 41bp 1 0.0795384781211097 1 0.0569166243076324 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SART1 ENSG00000175467 CDS Human protein_coding chr11:65733404 chr11:65733393 synonymous SNV . 0 10 hm5C_associated_SNPs_9394 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65733383-65733421
64251 chr11 65769593 65769593 1 - C T rs117774800 65769608 - 65769588 65769628 41 AGTACGGTTTTCGGAGGGATCAGACTCAGACTCACGTCGCA AGTACGGTTTTCGGAGGGATCAGACTCAGACTCACATCGCA < 41bp 1 0.552448306964422 1 0.813349962234497 experiment 0.895103386071156 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BANF1;EIF1AD ENSG00000175334;ENSG00000175376 UTR5 Human other chr11:65769608 chr11:65769593 . . 0 36 hm5C_associated_SNPs_9395 1 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:65769579-65769595
64251 chr11 65769596 65769596 1 - G C rs546268354 65769608 - 65769588 65769628 41 AGTACGGTTTTCGGAGGGATCAGACTCAGACTCACGTCGCA AGTACGGTTTTCGGAGGGATCAGACTCAGACTGACGTCGCA < 41bp 1 0.550638710544964 1 0.832885026931763 experiment 0.898722578910072 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BANF1;EIF1AD ENSG00000175334;ENSG00000175376 UTR5 Human other chr11:65769608 chr11:65769596 . . 0 33 hm5C_associated_SNPs_9396 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65769579-65769598
64251 chr11 66033999 66033999 1 + G A rs370619951 66034001 + 66033981 66034021 41 TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGCGTGCTGC TGGGCACTGGGCAGCTGCAGCCGGGGCTGCATGCGTGCTGC < 41bp 1 0.771635949766097 1 0.866101503372192 experiment 0.456728100467806 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC2 ENSG00000174996 CDS Human protein_coding chr11:66034001 chr11:66033999 nonsynonymous SNV 0.001 1 19 hm5C_associated_SNPs_9397 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:66033989-66034013
64251 chr11 66234468 66234468 1 + C A rs544968300 66234474 + 66234454 66234494 41 AGGCGGGGAGGGAGCGGCGCCCAGCGGGGCCCGGAGCGTGG AGGCGGGGAGGGAGAGGCGCCCAGCGGGGCCCGGAGCGTGG < 41bp 1 0.539577765338408 1 0.431431829929352 experiment 0.920844469323184 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PELI3 ENSG00000174516 UTR5 Human protein_coding chr11:66234474 chr11:66234468 . . 0 15 hm5C_associated_SNPs_9401 0 0 1 DDX3X POSTAR2 ENCODE chr11:66234379-66234497
64251 chr11 66261044 66261044 1 + C A rs76777675 66261037 + 66261017 66261057 41 GTACATCCTCTGGAAGGGGCCCTCCTTCGATGTGCAGGTGG GTACATCCTCTGGAAGGGGCCCTCCTTAGATGTGCAGGTGG < 41bp 1 0.0544374634452073 1 0.172056615352631 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66261037 chr11:66261044 nonsynonymous SNV 0.988 4 28 hm5C_associated_SNPs_9404 0 0 1 PPIG POSTAR2 ENCODE chr11:66261023-66261076
64251 chr11 66294133 66294133 1 + C A rs200577824 66294153 + 66294133 66294173 41 CATCAAGATCCTGAAGCGTACAGCAGTGTTTGTAGAGGGAG AATCAAGATCCTGAAGCGTACAGCAGTGTTTGTAGAGGGAG < 41bp 1 0.749913655901958 1 0.157460719347 experiment 0.500172688196084 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66294153 chr11:66294133 synonymous SNV . 0 1 hm5C_associated_SNPs_9406 1 0 1 PPIG POSTAR2 ENCODE chr11:66294117-66294218
64251 chr11 66411240 66411240 1 + C G rs376541870 66411252 + 66411232 66411272 41 TATAATTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT TATAATTAGGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT < 41bp 1 0.0672033908865413 1 0.0376466810703278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411252 chr11:66411240 stopgain 0.944 0 9 hm5C_associated_SNPs_9407 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr11:66411220-66411240
64251 chr11 66610645 66610645 1 + G C rs7570 66610663 + 66610643 66610683 41 GTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCT GTCCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCT < 41bp 1 0.64403005776287 1 0.884185910224915 experiment 0.71193988447426 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66610663 chr11:66610645 synonymous SNV . 0 3 hm5C_associated_SNPs_9408 0 1 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:66610637-66610674
64251 chr11 66627658 66627658 1 + G A rs79880981 66627671 + 66627651 66627691 41 AGAGAGTGTGGTGTGATGGACGGGCAGCTTCCTGTGTGCTC AGAGAGTATGGTGTGATGGACGGGCAGCTTCCTGTGTGCTC < 41bp 1 0.530784314823663 1 0.470032513141632 experiment 0.938431370352675 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627671 chr11:66627658 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_9409 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:66627640-66627660
64251 chr11 67024534 67024534 1 + C T rs7952436 67024537 + 67024517 67024557 41 GCCTTTTTCTTTGGTTGCTCCTGTGGAAAATACTGAAAAGA GCCTTTTTCTTTGGTTGTTCCTGTGGAAAATACTGAAAAGA < 41bp 1 0.167449464708263 1 0.386892288923264 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM2A ENSG00000173120 UTR3 Human protein_coding chr11:67024537 chr11:67024534 . . 0 18 hm5C_associated_SNPs_9412 0 1 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67024501-67024539
64251 chr11 67079396 67079396 1 + G C rs375663879 67079400 + 67079380 67079420 41 CCCCTGACACTGAAGAGGATCCACAACTCCTTGGAGAAACA CCCCTGACACTGAAGACGATCCACAACTCCTTGGAGAAACA < 41bp 1 0.20963375022164 1 0.125205248594284 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SSH3 ENSG00000172830 UTR3 Human protein_coding chr11:67079400 chr11:67079396 . . 0 17 hm5C_associated_SNPs_9416 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67079391-67079416
64251 chr11 67165714 67165714 1 + C T rs138232846 67165726 + 67165706 67165746 41 CCGGCTGCCAGCCCTGAGGCCAAGCACGGCTGGAGACCCAC CCGGCTGCTAGCCCTGAGGCCAAGCACGGCTGGAGACCCAC < 41bp 1 0.529946756932633 1 0.192518651485443 experiment 0.940106486134734 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1CA;RAD9A ENSG00000172531;ENSG00000172613 UTR3 Human other chr11:67165726 chr11:67165714 . . 0 9 hm5C_associated_SNPs_9417 0 0 4 PPIG POSTAR2 ENCODE chr11:67165694-67165715
64251 chr11 67165725 67165725 1 + C G rs565550066 67165726 + 67165706 67165746 41 CCGGCTGCCAGCCCTGAGGCCAAGCACGGCTGGAGACCCAC CCGGCTGCCAGCCCTGAGGGCAAGCACGGCTGGAGACCCAC < 41bp 1 0.519750163931488 1 0.261118143796921 experiment 0.960499672137025 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1CA;RAD9A ENSG00000172531;ENSG00000172613 UTR3 Human other chr11:67165726 chr11:67165725 . . 0 20 hm5C_associated_SNPs_9418 0 0 3 RBM15 POSTAR2 ENCODE chr11:67165676-67165737
64251 chr11 67202552 67202552 1 + C T rs373972783 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TCTACCTCCACTCCTGCCACCGCTGCCGCCCTCGACCACCG < 41bp 1 0.575132985388705 1 0.445396244525909 experiment 0.849734029222589 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202552 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_9419 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202552 67202552 1 + C T rs373972783 67202551 + 67202531 67202571 41 TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCC TACCTCCACTCCTGCCACCGCTGCCGCCCTCGACCACCGCC < 41bp 1 0.560757328794588 1 0.244651317596436 experiment 0.878485342410824 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202551 chr11:67202552 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_9420 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202552 67202552 1 + C T rs373972783 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCGCTGCCGCCCTCGACCACCGCCCCTC < 41bp 1 0.707360956814221 1 0.17332261800766 experiment 0.585278086371559 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202552 nonsynonymous SNV 0.000 0 18 hm5C_associated_SNPs_9421 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202573 67202573 1 + C G rs200313021 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCGTC < 41bp 1 0.588004296643535 1 0.246205568313599 experiment 0.82399140671293 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202573 nonsynonymous SNV 0.505 1 39 hm5C_associated_SNPs_9422 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67351297 67351297 1 + G A rs8191439 67351282 + 67351262 67351302 41 CTCGGAGGCCGCGAGGCCTTCGCTGGAGTTTCGCCGCCGCA CTCGGAGGCCGCGAGGCCTTCGCTGGAGTTTCGCCACCGCA < 41bp 1 0.661713269935065 1 0.333990514278412 experiment 0.67657346012987 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 UTR5 Human protein_coding chr11:67351282 chr11:67351297 . . 0 36 hm5C_associated_SNPs_9423 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67351274-67351303
64251 chr11 67353669 67353669 1 + T C rs199949339 67353680 + 67353660 67353700 41 AGACCTTCATTGTGGGAGACCAGGTGAGCATCTGGCCCCAT AGACCTTCACTGTGGGAGACCAGGTGAGCATCTGGCCCCAT < 41bp 1 0.702314923547 1 0.81816565990448 experiment 0.595370152906 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353680 chr11:67353669 nonsynonymous SNV 0.862 3 10 hm5C_associated_SNPs_9424 0 0 3 METAP2 POSTAR2 ENCODE chr11:67353624-67353681
64251 chr11 67374402 67374402 1 + T C rs373383800 67374409 + 67374389 67374429 41 GCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCA GCGCCACCTAGCGCCTCTATCGCGCCAGTTCCTCAGCCTCA < 41bp 1 0.656971866943407 1 0.568070292472839 experiment 0.686056266113185 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NDUFV1 ENSG00000167792 UTR5 Human protein_coding chr11:67374409 chr11:67374402 . . 0 14 hm5C_associated_SNPs_9425 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:67374400-67374420
64251 chr11 67374402 67374402 1 + T C rs373383800 67374422 + 67374402 67374442 41 TCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAAGGT CCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAAGGT < 41bp 1 0.385690464395057 1 0.422183990478516 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFV1 ENSG00000167792 UTR5 Human protein_coding chr11:67374422 chr11:67374402 . . 0 1 hm5C_associated_SNPs_9426 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:67374400-67374420
64251 chr11 67374410 67374410 1 + G A rs73490568 67374409 + 67374389 67374429 41 GCGCCACCTAGCGTCTCTATCGCGCCAGTTCCTCAGCCTCA GCGCCACCTAGCGTCTCTATCACGCCAGTTCCTCAGCCTCA < 41bp 1 0.586967516319937 1 0.458870023488998 experiment 0.826064967360127 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NDUFV1 ENSG00000167792 UTR5 Human protein_coding chr11:67374409 chr11:67374410 . . 0 22 hm5C_associated_SNPs_9427 2 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:67374400-67374420
64251 chr11 67374410 67374410 1 + G A rs73490568 67374422 + 67374402 67374442 41 TCTCTATCGCGCCAGTTCCTCAGCCTCAGTGCTATGAAGGT TCTCTATCACGCCAGTTCCTCAGCCTCAGTGCTATGAAGGT < 41bp 1 0.356134414169206 1 0.408865123987198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFV1 ENSG00000167792 UTR5 Human protein_coding chr11:67374422 chr11:67374410 . . 0 9 hm5C_associated_SNPs_9428 2 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:67374400-67374420
64251 chr11 67376950 67376950 1 + C T rs199702939 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACGCAGATGAGGGGGAGCCGGGCACCTGCAAGGACCGG < 41bp 1 0.479131435807125 1 0.704970061779022 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376950 synonymous SNV . 0 11 hm5C_associated_SNPs_9429 1 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr11 67376962 67376962 1 + G A rs140445386 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACGCAGACGAGGGGGAGCCAGGCACCTGCAAGGACCGG < 41bp 1 0.330606336884819 1 0.551296830177307 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376962 synonymous SNV . 0 23 hm5C_associated_SNPs_9430 3 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr11 67798125 67798125 1 + C T rs544094420 67798110 + 67798090 67798130 41 CAATACAGAAAAGGGGGAACCCGCTGGCCCAATGGCAGCGT CAATACAGAAAAGGGGGAACCCGCTGGCCCAATGGTAGCGT < 41bp 1 0.324927352498353 1 0.573661804199219 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout NDUFS8 ENSG00000110717 UTR5 Human protein_coding chr11:67798110 chr11:67798125 . . 0 36 hm5C_associated_SNPs_9433 2 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:67798124-67798125
64251 chr11 67804074 67804074 1 + C G rs1051806 67804064 + 67804044 67804084 41 ACTACTTGTATCGGTGACGCCCCACCGGCCCGCAGCCCCTG ACTACTTGTATCGGTGACGCCCCACCGGCCGGCAGCCCCTG < 41bp 1 0.14603654640281 1 0.178425192832947 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFS8 ENSG00000110717 UTR3 Human protein_coding chr11:67804064 chr11:67804074 . . 0 31 hm5C_associated_SNPs_9434 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67804019-67804090
64251 chr11 67810817 67810817 1 + G C rs370022338 67810831 + 67810811 67810851 41 AGCCCTGCCCAGCCCCGTGGCCGCCAGCTTTGTGGCAGGTG AGCCCTCCCCAGCCCCGTGGCCGCCAGCTTTGTGGCAGGTG < 41bp 1 0.0594366481342803 1 0.28610822558403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TCIRG1 ENSG00000110719 UTR5 Human protein_coding chr11:67810831 chr11:67810817 . . 0 7 hm5C_associated_SNPs_9435 0 0 29 BCCIP POSTAR2 ENCODE chr11:67810777-67810843
64251 chr11 67815400 67815400 1 + C T rs34211419 67815417 + 67815397 67815437 41 CACCGGTGTCTTCCTGGGACCCTACCCCTTTGGCATCGATC CACTGGTGTCTTCCTGGGACCCTACCCCTTTGGCATCGATC < 41bp 1 0.00951800954762625 1 0.0506728291511536 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815417 chr11:67815400 synonymous SNV . 0 4 hm5C_associated_SNPs_9436 2 0 1 SRSF1 POSTAR2 ENCODE chr11:67815391-67815417
64251 chr11 67818114 67818114 1 + C T rs141356870 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACTCTCAGCCTTCCTGCATGCCCTGCGGC < 41bp 1 0.0318991623165925 1 0.35627681016922 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818114 synonymous SNV . 0 31 hm5C_associated_SNPs_9437 1 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818114 67818114 1 + C T rs141356870 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACTCTCAGCCTTCCTGCATGCCCTGCGGCT < 41bp 1 0.124087311019479 1 0.452183187007904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818114 synonymous SNV . 0 30 hm5C_associated_SNPs_9438 1 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 68177423 68177423 1 + C T rs33958013 68177413 + 68177393 68177433 41 CGCCTTCATGAACGGGAGCTCGGTGGAGCACGTGGTGGAGT CGCCTTCATGAACGGGAGCTCGGTGGAGCATGTGGTGGAGT < 41bp 1 0.395285393733856 1 0.427719473838806 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68177413 chr11:68177423 synonymous SNV . 0 31 hm5C_associated_SNPs_9440 0 0 1 PPIG POSTAR2 ENCODE chr11:68177418-68177504
64251 chr11 68177429 68177429 1 + G A rs34369535 68177413 + 68177393 68177433 41 CGCCTTCATGAACGGGAGCTCGGTGGAGCACGTGGTGGAGT CGCCTTCATGAACGGGAGCTCGGTGGAGCACGTGGTAGAGT < 41bp 1 0.421076590760062 1 0.531676650047302 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68177413 chr11:68177429 synonymous SNV . 0 37 hm5C_associated_SNPs_9441 1 0 1 PPIG POSTAR2 ENCODE chr11:68177418-68177504
64251 chr11 68204445 68204445 1 + C T rs3736229 68204450 + 68204430 68204470 41 CCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTG CCCCGACTGTATCGATGGCTCCGACGAGCTCATGTGTGGTG < 41bp 1 0.151737237224567 1 0.105746060609818 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204450 chr11:68204445 synonymous SNV . 0 16 hm5C_associated_SNPs_9442 1 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr11 68204445 68204445 1 + C T rs3736229 68204451 + 68204431 68204471 41 CCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGA CCCGACTGTATCGATGGCTCCGACGAGCTCATGTGTGGTGA < 41bp 1 0.407743044767799 1 0.465917944908142 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204451 chr11:68204445 synonymous SNV . 0 15 hm5C_associated_SNPs_9443 1 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr11 68213989 68213989 1 + C G rs1127291 68213986 + 68213966 68214006 41 CTCTTCAAACATTCCGGCCACTGCGAGACCGTACAGGTAGG CTCTTCAAACATTCCGGCCACTGGGAGACCGTACAGGTAGG < 41bp 1 0.514451617269969 1 0.60842752456665 experiment 0.971096765460061 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68213986 chr11:68213989 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_9444 0 0 4 BUD13 POSTAR2 ENCODE chr11:68213965-68214000
64251 chr11 68671419 68671419 1 + C T rs4930624 68671416 + 68671396 68671436 41 CTAGGGGCCCAGGCCGGCGGCGGCGATGGCCTCGGCAGCTG CTAGGGGCCCAGGCCGGCGGCGGTGATGGCCTCGGCAGCTG < 41bp 1 0.695264675274597 1 0.769588828086853 experiment 0.609470649450806 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IGHMBP2 ENSG00000132740 UTR5 Human protein_coding chr11:68671416 chr11:68671419 . . 0 24 hm5C_associated_SNPs_9445 2 0 1 DDX3X POSTAR2 ENCODE chr11:68671371-68671459
64251 chr11 68707454 68707454 1 + T C rs564244 68707463 + 68707443 68707483 41 TCCCTTCCCCTTACTCCCCGCCAAAACCCACATCCCAGCCT TCCCTTCCCCTCACTCCCCGCCAAAACCCACATCCCAGCCT < 41bp 1 0.17055982016506 1 0.189378708600998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGHMBP2 ENSG00000132740 UTR3 Human protein_coding chr11:68707463 chr11:68707454 . . 0 12 hm5C_associated_SNPs_9446 1 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:68707433-68707492
64251 chr11 69466115 69466115 1 + C A rs7177 69466128 + 69466108 69466148 41 GTGCTCCCCTGACAGTCCCTCCTCTCCGGAGCATTTTGATA GTGCTCCACTGACAGTCCCTCCTCTCCGGAGCATTTTGATA < 41bp 1 0.042371788426563 1 0.120230913162231 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCND1 ENSG00000110092 UTR3 Human protein_coding chr11:69466128 chr11:69466115 . . 0 8 hm5C_associated_SNPs_9449 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:69466115-69466152
64251 chr11 69466115 69466115 1 + C A rs7177 69466129 + 69466109 69466149 41 TGCTCCCCTGACAGTCCCTCCTCTCCGGAGCATTTTGATAC TGCTCCACTGACAGTCCCTCCTCTCCGGAGCATTTTGATAC < 41bp 1 0.136327667412333 1 0.258951812982559 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCND1 ENSG00000110092 UTR3 Human protein_coding chr11:69466129 chr11:69466115 . . 0 7 hm5C_associated_SNPs_9450 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:69466115-69466152
64251 chr11 70053224 70053224 1 + G A rs149373917 70053212 + 70053192 70053232 41 CCCTGTGTGAGTTGAGTCTCCTCTCTGAGACTGCTAAGTAG CCCTGTGTGAGTTGAGTCTCCTCTCTGAGACTACTAAGTAG < 41bp 1 0.426218520053136 1 0.0930450260639191 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADD ENSG00000254721 ncRNA_exonic Human antisense chr11:70053212 chr11:70053224 . . 0 33 hm5C_associated_SNPs_9451 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:70053218-70053232
64251 chr11 70229747 70229747 1 + T C rs115252708 70229732 + 70229712 70229752 41 AAATGGCTGGTGTTAAATATCAGCTCCTAATAAGATGTGGA AAATGGCTGGTGTTAAATATCAGCTCCTAATAAGACGTGGA < 41bp 1 0.258764392627154 1 0.496349692344666 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPFIA1 ENSG00000246889 ncRNA_intronic Human antisense chr11:70229732 chr11:70229747 . . 0 36 hm5C_associated_SNPs_9452 0 0 3 RBPMS POSTAR2 SRX484628 chr11:70229740-70229760
64251 chr11 70253475 70253475 1 + C T rs2298397 70253474 + 70253454 70253494 41 GGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGGTAG GGGGGCCGATGACTGGGAGACTGACCCTGATTTTGTGGTAG < 41bp 1 0.317682852082152 1 0.193307220935822 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70253474 chr11:70253475 synonymous SNV . 0 22 hm5C_associated_SNPs_9453 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:70253440-70253483
64251 chr11 70275242 70275242 1 + G A rs114157745 70275262 + 70275242 70275282 41 GGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG AGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG < 41bp 1 0.428617713078125 1 0.408005774021149 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275262 chr11:70275242 synonymous SNV . 0 1 hm5C_associated_SNPs_9454 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:70275240-70275260
64251 chr11 70282012 70282012 1 + C T rs115120216 70282032 + 70282012 70282052 41 CGGGTCTCTGGATTGGGACGCACAGTGCAGTTGAGGTCTGC TGGGTCTCTGGATTGGGACGCACAGTGCAGTTGAGGTCTGC < 41bp 1 0.468590272395814 1 0.215742290019989 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70282032 chr11:70282012 . . 0 1 hm5C_associated_SNPs_9455 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:70281970-70282113
64251 chr11 71191891 71191891 1 + G A rs138969547 71191878 + 71191858 71191898 41 GAGGACTTGCTGGCACCCATCTCTGAGCCCATCGAGTGGAA GAGGACTTGCTGGCACCCATCTCTGAGCCCATCAAGTGGAA < 41bp 1 0.454098532960748 1 0.812594592571259 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71191878 chr11:71191891 nonsynonymous SNV 0.598 0 34 hm5C_associated_SNPs_9456 0 0 7 BUD13 POSTAR2 ENCODE chr11:71191841-71191930
64251 chr11 71209499 71209499 1 + G A rs145428769 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GCGTACCACGCCGAGAACTACAGCCCTGAAGACAACAGGTT < 41bp 1 0.199538068748749 1 0.349709898233414 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209499 synonymous SNV . 0 30 hm5C_associated_SNPs_9457 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:71209499-71209500
64251 chr11 71708200 71708200 1 + G A rs76430787 71708203 + 71708183 71708223 41 TGGTGACACGTGCCAGCGGTCACTCTGCCACATCACTTCCT TGGTGACACGTGCCAGCAGTCACTCTGCCACATCACTTCCT < 41bp 1 0.320911087712504 1 0.112572729587555 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF121 ENSG00000137522 UTR3 Human protein_coding chr11:71708203 chr11:71708200 . . 0 18 hm5C_associated_SNPs_9461 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:71708165-71708203
64251 chr11 71791491 71791491 1 - C A rs185830107 71791471 - 71791451 71791491 41 GGCCCGCGTTTGGCGTGCGGCCTGGGCACCCCTGCGGGTGC TGCCCGCGTTTGGCGTGCGGCCTGGGCACCCCTGCGGGTGC < 41bp 1 0.226533328695174 1 0.261387944221497 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRTOMT ENSG00000137497;ENSG00000184154 UTR5 Human other chr11:71791471 chr11:71791491 . . 0 1 hm5C_associated_SNPs_9462 1 0 2 DDX3X POSTAR2 ENCODE chr11:71791392-71791500
64251 chr11 71935955 71935955 1 + G C rs368831164 71935945 + 71935925 71935965 41 CCTCAAGCCCGGGCCCCGGGCCCGGCCCCAGCCTCAGCCCT CCTCAAGCCCGGGCCCCGGGCCCGGCCCCACCCTCAGCCCT < 41bp 1 0.577257457916747 1 0.261160492897034 experiment 0.845485084166507 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control INPPL1 ENSG00000165458 UTR5 Human protein_coding chr11:71935945 chr11:71935955 . . 0 31 hm5C_associated_SNPs_9463 0 0 3 DDX3X POSTAR2 ENCODE chr11:71935900-71935975
64251 chr11 71935955 71935955 1 + G C rs368831164 71935946 + 71935926 71935966 41 CTCAAGCCCGGGCCCCGGGCCCGGCCCCAGCCTCAGCCCTG CTCAAGCCCGGGCCCCGGGCCCGGCCCCACCCTCAGCCCTG < 41bp 1 0.357496793521501 1 0.147614061832428 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control INPPL1 ENSG00000165458 UTR5 Human protein_coding chr11:71935946 chr11:71935955 . . 0 30 hm5C_associated_SNPs_9464 0 0 3 DDX3X POSTAR2 ENCODE chr11:71935900-71935975
64251 chr11 71935955 71935955 1 + G C rs368831164 71935947 + 71935927 71935967 41 TCAAGCCCGGGCCCCGGGCCCGGCCCCAGCCTCAGCCCTGA TCAAGCCCGGGCCCCGGGCCCGGCCCCACCCTCAGCCCTGA < 41bp 1 0.612685110018075 1 0.765957057476044 experiment 0.774629779963851 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 UTR5 Human protein_coding chr11:71935947 chr11:71935955 . . 0 29 hm5C_associated_SNPs_9465 0 0 3 DDX3X POSTAR2 ENCODE chr11:71935900-71935975
64251 chr11 71936141 71936141 1 + C T rs543631142 71936135 + 71936115 71936155 41 GGCCGCGGAGGAGCTGCTGGCCCGGGCGGGCCGCGATGGCA GGCCGCGGAGGAGCTGCTGGCCCGGGTGGGCCGCGATGGCA < 41bp 1 0.665304421390752 1 0.538396298885345 experiment 0.669391157218495 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71936135 chr11:71936141 nonsynonymous SNV 0.998 5 27 hm5C_associated_SNPs_9466 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71936140-71936174
64251 chr11 71941212 71941212 1 + A G rs2276048 71941211 + 71941191 71941231 41 CCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCG CCTGACCAAGATTGGGAAGTCGCAGAAGTTCACGCTGAGCG < 41bp 1 0.514435379675363 1 0.559022724628448 experiment 0.971129240649274 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71941211 chr11:71941212 synonymous SNV . 0 22 hm5C_associated_SNPs_9467 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:71941211-71941212
64251 chr11 71945332 71945332 1 + A G rs61736312 71945331 + 71945311 71945351 41 CCCTTTCTCCTCAGGGCTCTCAAAGACTTCAGACCAGGCCT CCCTTTCTCCTCAGGGCTCTCGAAGACTTCAGACCAGGCCT < 41bp 1 0.389107934466627 1 0.860606670379639 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71945331 chr11:71945332 synonymous SNV . 0 22 hm5C_associated_SNPs_9468 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:71945320-71945340
64251 chr11 71948802 71948802 1 + C A rs200602515 71948820 + 71948800 71948840 41 CCCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGAGGAG CCAGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGAGGAG < 41bp 1 0.779085329742564 1 0.865331053733826 experiment 0.441829340514871 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71948820 chr11:71948802 nonsynonymous SNV 0.979 0 3 hm5C_associated_SNPs_9469 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:71948739-71948813
64251 chr11 71949665 71949665 1 + G C rs9886 71949677 + 71949657 71949697 41 GCTGTCCTGTTTTACTGGACCCCGCCTCCCAGCCCCAGGGG GCTGTCCTCTTTTACTGGACCCCGCCTCCCAGCCCCAGGGG < 41bp 1 0.274152626544425 1 0.0651453137397766 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 UTR3 Human protein_coding chr11:71949677 chr11:71949665 . . 0 9 hm5C_associated_SNPs_9470 0 0 9 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:71949639-71949665
64251 chr11 71949724 71949724 1 + T C rs70940823 71949730 + 71949710 71949750 41 TCCATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCT TCCATTTGGGTACGCCTGGGCCCCCACTTTCACCAGTTTCT < 41bp 1 0.0762354021491082 1 0.0440005958080292 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INPPL1 ENSG00000165458 UTR3 Human protein_coding chr11:71949730 chr11:71949724 . . 0 15 hm5C_associated_SNPs_9471 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71949719-71949770
64251 chr11 71949724 71949724 1 + T C rs70940823 71949732 + 71949712 71949752 41 CATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGC CATTTGGGTACGCCTGGGCCCCCACTTTCACCAGTTTCTGC < 41bp 1 0.118852813320239 1 0.0174606144428253 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INPPL1 ENSG00000165458 UTR3 Human protein_coding chr11:71949732 chr11:71949724 . . 0 13 hm5C_associated_SNPs_9472 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71949719-71949770
64251 chr11 71949724 71949724 1 + T C rs70940823 71949733 + 71949713 71949753 41 ATTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCG ATTTGGGTACGCCTGGGCCCCCACTTTCACCAGTTTCTGCG < 41bp 1 0.208197855175853 1 0.0662630796432495 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INPPL1 ENSG00000165458 UTR3 Human protein_coding chr11:71949733 chr11:71949724 . . 0 12 hm5C_associated_SNPs_9473 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71949719-71949770
64251 chr11 71949724 71949724 1 + T C rs70940823 71949734 + 71949714 71949754 41 TTTGGGTACGTCTGGGCCCCCACTTTCACCAGTTTCTGCGG TTTGGGTACGCCTGGGCCCCCACTTTCACCAGTTTCTGCGG < 41bp 1 0.394136110270264 1 0.0488653182983398 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INPPL1 ENSG00000165458 UTR3 Human protein_coding chr11:71949734 chr11:71949724 . . 0 11 hm5C_associated_SNPs_9474 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71949719-71949770
64251 chr11 72540481 72540481 1 + A G rs544552620 72540472 + 72540452 72540492 41 CCTGGGCTGGAGCTCTTGCCCGAAGCCTGAAGCTTCCTTCG CCTGGGCTGGAGCTCTTGCCCGAAGCCTGGAGCTTCCTTCG < 41bp 1 0.738836130984498 1 0.708029866218567 experiment 0.522327738031004 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ATG16L2 ENSG00000168010 UTR3 Human protein_coding chr11:72540472 chr11:72540481 . . 0 30 hm5C_associated_SNPs_9475 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:72540461-72540489
64251 chr11 73022615 73022615 1 + G T rs149581120 73022597 + 73022577 73022617 41 CATTTATGCCTATTGTGGTGCCTGAGCCACCAACTTCTGTT CATTTATGCCTATTGTGGTGCCTGAGCCACCAACTTCTTTT < 41bp 1 0.0560387792199279 1 0.0155595541000366 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73022597 chr11:73022615 nonsynonymous SNV 0.000 1 39 hm5C_associated_SNPs_9480 0 0 1 DDX6 POSTAR2 ENCODE chr11:73022612-73022664
64251 chr11 73073118 73073118 1 + C T rs369232606 73073111 + 73073091 73073131 41 TGTGCGGCTCCCACCCTGAACAGCTGCCCGGAGCCCTCGCC TGTGCGGCTCCCACCCTGAACAGCTGCTCGGAGCCCTCGCC < 41bp 1 0.402633333876264 1 0.297950208187103 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73073111 chr11:73073118 nonsynonymous SNV 0.388 1 28 hm5C_associated_SNPs_9481 0 0 1 PPIG POSTAR2 ENCODE chr11:73073082-73073152
64251 chr11 73360041 73360041 1 + G A rs138039493 73360060 + 73360040 73360080 41 CGTGGCTCCTCTGACAGGTCCCGCCTGACTCCGCTCTGGAA CATGGCTCCTCTGACAGGTCCCGCCTGACTCCGCTCTGGAA < 41bp 1 0.0916831883448067 1 0.0486797094345093 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHB1 ENSG00000021300 UTR5 Human protein_coding chr11:73360060 chr11:73360041 . . 0 2 hm5C_associated_SNPs_9485 0 0 2 DDX3X POSTAR2 ENCODE chr11:73359967-73360077
64251 chr11 73575499 73575499 1 + G A rs1051090 73575502 + 73575482 73575522 41 GTTAGAGTTCATCAGGAGACCCAACCCTTAGATTTCATAAG GTTAGAGTTCATCAGGAAACCCAACCCTTAGATTTCATAAG < 41bp 1 0.202640642397866 1 0.377339839935303 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL48 ENSG00000175581 UTR3 Human protein_coding chr11:73575502 chr11:73575499 . . 0 18 hm5C_associated_SNPs_9486 0 0 5 UPF1 POSTAR2 GSE47976,GSM1163974 chr11:73575498-73575499
64251 chr11 73575504 73575504 1 + A G rs12262 73575502 + 73575482 73575522 41 GTTAGAGTTCATCAGGAGACCCAACCCTTAGATTTCATAAG GTTAGAGTTCATCAGGAGACCCGACCCTTAGATTTCATAAG < 41bp 1 0.231883954994005 1 0.235652834177017 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL48 ENSG00000175581 UTR3 Human protein_coding chr11:73575502 chr11:73575504 . . 0 23 hm5C_associated_SNPs_9487 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:73575499-73575522
64251 chr11 73882434 73882434 1 + A G rs192487999 73882450 + 73882430 73882470 41 GCCTACTGTTTGACTACGTGCGTGCAGCCTCCCCTCGATGT GCCTGCTGTTTGACTACGTGCGTGCAGCCTCCCCTCGATGT < 41bp 1 0.474173762236392 1 0.0743888020515442 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPME1 ENSG00000214517 UTR5 Human protein_coding chr11:73882450 chr11:73882434 . . 0 5 hm5C_associated_SNPs_9488 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr11:73882425-73882453
64251 chr11 74329609 74329609 1 + C A rs148419916 74329602 + 74329582 74329622 41 ATTTAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTC ATTTAGTGCTATACAATGTGCAGCTGCAGTCCCTAGAGCTC < 41bp 1 0.393451305514039 1 0.227997422218323 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329602 chr11:74329609 synonymous SNV . 0 28 hm5C_associated_SNPs_9489 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329609 74329609 1 + C A rs148419916 74329605 + 74329585 74329625 41 TAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTG TAGTGCTATACAATGTGCAGCTGCAGTCCCTAGAGCTCCTG < 41bp 1 0.597451604961904 1 0.241962045431137 experiment 0.805096790076192 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329605 chr11:74329609 synonymous SNV . 0 25 hm5C_associated_SNPs_9490 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329609 74329609 1 + C A rs148419916 74329608 + 74329588 74329628 41 TGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTG TGCTATACAATGTGCAGCTGCAGTCCCTAGAGCTCCTGCTG < 41bp 1 0.145936051428532 1 0.220029950141907 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329608 chr11:74329609 synonymous SNV . 0 22 hm5C_associated_SNPs_9491 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329609 74329609 1 + C A rs148419916 74329623 + 74329603 74329643 41 AGCTGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTT AGCTGCAGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTT < 41bp 1 0.647734973930755 1 0.102852493524551 experiment 0.70453005213849 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329623 chr11:74329609 synonymous SNV . 0 7 hm5C_associated_SNPs_9492 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329609 74329609 1 + C A rs148419916 74329626 + 74329606 74329646 41 TGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA TGCAGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA < 41bp 1 0.683777694898591 1 0.261715471744537 experiment 0.632444610202819 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329626 chr11:74329609 synonymous SNV . 0 4 hm5C_associated_SNPs_9493 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329602 + 74329582 74329622 41 ATTTAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTC ATTTAGTGCTATACAATGTGCAGCTGCCGTCCCCAGAGCTC < 41bp 1 0.412159670119588 1 0.186420470476151 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329602 chr11:74329615 synonymous SNV . 0 34 hm5C_associated_SNPs_9494 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329605 + 74329585 74329625 41 TAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTG TAGTGCTATACAATGTGCAGCTGCCGTCCCCAGAGCTCCTG < 41bp 1 0.238221917447334 1 0.0844994485378265 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329605 chr11:74329615 synonymous SNV . 0 31 hm5C_associated_SNPs_9495 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329608 + 74329588 74329628 41 TGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTG TGCTATACAATGTGCAGCTGCCGTCCCCAGAGCTCCTGCTG < 41bp 1 0.0562773338635109 1 0.0530762076377869 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329608 chr11:74329615 synonymous SNV . 0 28 hm5C_associated_SNPs_9496 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329609 + 74329589 74329629 41 GCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTGA GCTATACAATGTGCAGCTGCCGTCCCCAGAGCTCCTGCTGA < 41bp 1 0.144968584225534 1 0.17559227347374 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329609 chr11:74329615 synonymous SNV . 0 27 hm5C_associated_SNPs_9497 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329614 + 74329594 74329634 41 ACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTGAATCCT ACAATGTGCAGCTGCCGTCCCCAGAGCTCCTGCTGAATCCT < 41bp 1 0.558904622309459 1 0.502743005752563 experiment 0.882190755381081 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329614 chr11:74329615 synonymous SNV . 0 22 hm5C_associated_SNPs_9498 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329623 + 74329603 74329643 41 AGCTGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTT AGCTGCCGTCCCCAGAGCTCCTGCTGAATCCTCTTCGTCTT < 41bp 1 0.609958062706653 1 0.124752104282379 experiment 0.780083874586695 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329623 chr11:74329615 synonymous SNV . 0 13 hm5C_associated_SNPs_9499 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329626 + 74329606 74329646 41 TGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA TGCCGTCCCCAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA < 41bp 1 0.690727217703576 1 0.203225016593933 experiment 0.618545564592848 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329626 chr11:74329615 synonymous SNV . 0 10 hm5C_associated_SNPs_9500 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329615 74329615 1 + T C rs4944052 74329633 + 74329613 74329653 41 CCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCAAAAAGTT CCCAGAGCTCCTGCTGAATCCTCTTCGTCTTCCAAAAAGTT < 41bp 1 0.116022947410793 1 0.0903134942054749 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329633 chr11:74329615 synonymous SNV . 0 3 hm5C_associated_SNPs_9501 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74353107 74353107 1 + C T rs3824998 74353126 + 74353106 74353146 41 ACGTAGCAGACAAGGGGTGTCTGACTGGCTTCTTTTGCCTC ATGTAGCAGACAAGGGGTGTCTGACTGGCTTCTTTTGCCTC < 41bp 1 0.605312853765509 1 0.258731544017792 experiment 0.789374292468982 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD3 ENSG00000077514 UTR3 Human protein_coding chr11:74353126 chr11:74353107 . . 0 2 hm5C_associated_SNPs_9506 0 0 5 LIN28A POSTAR2 GSE39873,GSM980593 chr11:74353100-74353120
64251 chr11 74353161 74353161 1 + C T rs557954215 74353176 + 74353156 74353196 41 TATGTCGTAAGTGATGCAATCAGCTGTCTGCTTTTTAAGGT TATGTTGTAAGTGATGCAATCAGCTGTCTGCTTTTTAAGGT < 41bp 1 0.676119682154945 1 0.528456628322601 experiment 0.647760635690109 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD3 ENSG00000077514 UTR3 Human protein_coding chr11:74353176 chr11:74353161 . . 0 6 hm5C_associated_SNPs_9507 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:74353160-74353180
64251 chr11 74459991 74459991 1 + G A rs545344016 74460003 + 74459983 74460023 41 AGTCGGCGGGGCCGGCGGGGCCGCTGTGACGAGACGGCGGC AGTCGGCGAGGCCGGCGGGGCCGCTGTGACGAGACGGCGGC < 41bp 1 0.666074732610397 1 0.420274317264557 experiment 0.667850534779205 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF169 ENSG00000166439 CDS Human protein_coding chr11:74460003 chr11:74459991 synonymous SNV . 0 9 hm5C_associated_SNPs_9508 0 0 4 BUD13 POSTAR2 ENCODE chr11:74459927-74459998
64251 chr11 74460229 74460229 1 + G A rs559354882 74460221 + 74460201 74460241 41 CCAACGCGCCGCCGACGCGGCGGGCCCGGGTTGCCCTCGCT CCAACGCGCCGCCGACGCGGCGGGCCCGAGTTGCCCTCGCT < 41bp 1 0.727291959040637 1 0.710388541221619 experiment 0.545416081918726 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF169 ENSG00000166439 CDS Human protein_coding chr11:74460221 chr11:74460229 nonsynonymous SNV 0.046 0 29 hm5C_associated_SNPs_9509 0 0 1 GEMIN5 POSTAR2 ENCODE chr11:74460189-74460257
64251 chr11 74460229 74460229 1 + G A rs559354882 74460226 + 74460206 74460246 41 GCGCCGCCGACGCGGCGGGCCCGGGTTGCCCTCGCTGCCGC GCGCCGCCGACGCGGCGGGCCCGAGTTGCCCTCGCTGCCGC < 41bp 1 0.784976565109724 1 0.478888750076294 experiment 0.430046869780552 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control RNF169 ENSG00000166439 CDS Human protein_coding chr11:74460226 chr11:74460229 nonsynonymous SNV 0.046 0 24 hm5C_associated_SNPs_9510 0 0 1 GEMIN5 POSTAR2 ENCODE chr11:74460189-74460257
64251 chr11 74547914 74547914 1 + G C rs141761512 74547926 + 74547906 74547946 41 GGGCCTTTGTAGTCAATATCCAAGGGAAAAGCATCTCCGTT GGGCCTTTCTAGTCAATATCCAAGGGAAAAGCATCTCCGTT < 41bp 1 0.739666870294217 1 0.950471162796021 experiment 0.520666259411567 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RNF169 ENSG00000166439 UTR3 Human protein_coding chr11:74547926 chr11:74547914 . . 0 9 hm5C_associated_SNPs_9511 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:74547884-74547937
64251 chr11 75110563 75110563 1 + C G rs553767972 75110575 + 75110555 75110595 41 GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG GCCACTTCGTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG < 41bp 1 0.69318392182848 1 0.783592045307159 experiment 0.61363215634304 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110575 chr11:75110563 . . 0 9 hm5C_associated_SNPs_9512 0 0 27 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110563 75110563 1 + C G rs553767972 75110580 + 75110560 75110600 41 TTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG TTCGTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG < 41bp 1 0.62628708336333 1 0.39202418923378 experiment 0.74742583327334 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110580 chr11:75110563 . . 0 4 hm5C_associated_SNPs_9513 0 0 27 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110563 75110563 1 + C G rs553767972 75110582 + 75110562 75110602 41 CCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCA CGTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCA < 41bp 1 0.797242316465038 1 0.755182683467865 experiment 0.405515367069924 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110582 chr11:75110563 . . 0 2 hm5C_associated_SNPs_9514 0 0 27 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110575 75110575 1 + C G rs17881757 75110580 + 75110560 75110600 41 TTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG TTCCTTTCCTTTCAGGGGAGCGCGGCGGCAAGATGGCAGTG < 41bp 1 0.648154898526769 1 0.534878313541412 experiment 0.703690202946462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110580 chr11:75110575 . . 0 16 hm5C_associated_SNPs_9515 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110575 75110575 1 + C G rs17881757 75110585 + 75110565 75110605 41 TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAAT TTCCTTTCAGGGGAGCGCGGCGGCAAGATGGCAGTGCAAAT < 41bp 1 0.660587873266479 1 0.575757265090942 experiment 0.678824253467042 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110585 chr11:75110575 . . 0 11 hm5C_associated_SNPs_9516 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110576 75110576 1 + G A rs17880657 75110575 + 75110555 75110595 41 GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG GCCACTTCCTTTCCTTTCAGCAGAGCGCGGCGGCAAGATGG < 41bp 1 0.632238754506999 1 0.433421462774277 experiment 0.735522490986001 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110575 chr11:75110576 . . 0 22 hm5C_associated_SNPs_9517 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110576 75110576 1 + G A rs17880657 75110580 + 75110560 75110600 41 TTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG TTCCTTTCCTTTCAGCAGAGCGCGGCGGCAAGATGGCAGTG < 41bp 1 0.636351046871539 1 0.37890613079071 experiment 0.727297906256923 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110580 chr11:75110576 . . 0 17 hm5C_associated_SNPs_9518 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110576 75110576 1 + G A rs17880657 75110582 + 75110562 75110602 41 CCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCA CCTTTCCTTTCAGCAGAGCGCGGCGGCAAGATGGCAGTGCA < 41bp 1 0.799971002694276 1 0.707671105861664 experiment 0.400057994611449 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110582 chr11:75110576 . . 0 15 hm5C_associated_SNPs_9519 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110576 75110576 1 + G A rs17880657 75110585 + 75110565 75110605 41 TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAAT TTCCTTTCAGCAGAGCGCGGCGGCAAGATGGCAGTGCAAAT < 41bp 1 0.619766306848322 1 0.471077382564545 experiment 0.760467386303355 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110585 chr11:75110576 . . 0 12 hm5C_associated_SNPs_9520 0 0 38 TIA1 POSTAR2 E-MTAB-432,ERR039774-ERR039775-ERR039777 chr11:75110559-75110580
64251 chr11 75110581 75110581 1 + G C rs531798394 75110575 + 75110555 75110595 41 GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG GCCACTTCCTTTCCTTTCAGCGGAGCCCGGCGGCAAGATGG < 41bp 1 0.655598525459994 1 0.786227226257324 experiment 0.688802949080012 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110575 chr11:75110581 . . 0 27 hm5C_associated_SNPs_9521 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75110581 75110581 1 + G C rs531798394 75110580 + 75110560 75110600 41 TTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG TTCCTTTCCTTTCAGCGGAGCCCGGCGGCAAGATGGCAGTG < 41bp 1 0.402692531378674 1 0.149252325296402 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110580 chr11:75110581 . . 0 22 hm5C_associated_SNPs_9522 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75110581 75110581 1 + G C rs531798394 75110585 + 75110565 75110605 41 TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAAT TTCCTTTCAGCGGAGCCCGGCGGCAAGATGGCAGTGCAAAT < 41bp 1 0.653704286760129 1 0.511601984500885 experiment 0.692591426479741 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110585 chr11:75110581 . . 0 17 hm5C_associated_SNPs_9523 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75110589 75110589 1 + A C rs3133187 75110575 + 75110555 75110595 41 GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGG GCCACTTCCTTTCCTTTCAGCGGAGCGCGGCGGCCAGATGG < 41bp 1 0.706046470150321 1 0.793575763702393 experiment 0.587907059699358 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110575 chr11:75110589 . . 0 35 hm5C_associated_SNPs_9524 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75110589 75110589 1 + A C rs3133187 75110580 + 75110560 75110600 41 TTCCTTTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTG TTCCTTTCCTTTCAGCGGAGCGCGGCGGCCAGATGGCAGTG < 41bp 1 0.622164444431185 1 0.307306885719299 experiment 0.75567111113763 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110580 chr11:75110589 . . 0 30 hm5C_associated_SNPs_9525 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75110589 75110589 1 + A C rs3133187 75110585 + 75110565 75110605 41 TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAAT TTCCTTTCAGCGGAGCGCGGCGGCCAGATGGCAGTGCAAAT < 41bp 1 0.416999747369978 1 0.38908064365387 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 UTR5 Human protein_coding chr11:75110585 chr11:75110589 . . 0 25 hm5C_associated_SNPs_9526 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:75110560-75110600
64251 chr11 75111523 75111523 1 + T G rs371639267 75111518 + 75111498 75111538 41 CTGTGCTGCGTTCTGTGGCACAGTTTAAAGAGCCCTGGTTG CTGTGCTGCGTTCTGTGGCACAGTTGAAAGAGCCCTGGTTG < 41bp 1 0.147895139382568 1 0.403024792671204 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD15A ENSG00000206941 ncRNA_exonic Human snoRNA chr11:75111518 chr11:75111523 . . 0 26 hm5C_associated_SNPs_9527 0 0 33 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:75111420-75111560
64251 chr11 75279846 75279846 1 + C T rs649257 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTCCTATACTGTGGGTGTCATGATGATGCACCGGACAGG < 41bp 1 0.528274833422174 1 0.152158051729202 experiment 0.943450333155652 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279846 synonymous SNV . 0 12 hm5C_associated_SNPs_9528 1 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:75279811-75279852
64251 chr11 75280006 75280006 1 + C T rs61733248 75279988 + 75279968 75280008 41 TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGACGA TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGATGA < 41bp 1 0.513441168520637 1 0.768744230270386 experiment 0.973117662958725 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279988 chr11:75280006 synonymous SNV . 0 39 hm5C_associated_SNPs_9529 2 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:75279984-75280022
64251 chr11 75283482 75283482 1 + G A rs541972599 75283485 + 75283465 75283505 41 CCAAATTGAGCTAGGGGGGTCAGCCAGCCCTCTTCTGACAC CCAAATTGAGCTAGGGGAGTCAGCCAGCCCTCTTCTGACAC < 41bp 1 0.570077386241003 1 0.320429146289825 experiment 0.859845227517994 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75283485 chr11:75283482 . . 0 18 hm5C_associated_SNPs_9530 0 0 23 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:75283420-75283520
64251 chr11 75283684 75283684 1 + G A rs180685772 75283698 + 75283678 75283718 41 TCTGGCGTTGTGGGGATGAACTTTTTGTTTTGTTTCTTCCT TCTGGCATTGTGGGGATGAACTTTTTGTTTTGTTTCTTCCT < 41bp 1 0.16366084347016 1 0.0617407560348511 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75283698 chr11:75283684 . . 0 7 hm5C_associated_SNPs_9531 1 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:75283638-75283731
64251 chr11 75283708 75283708 1 + T G rs145619367 75283698 + 75283678 75283718 41 TCTGGCGTTGTGGGGATGAACTTTTTGTTTTGTTTCTTCCT TCTGGCGTTGTGGGGATGAACTTTTTGTTTGGTTTCTTCCT < 41bp 1 0.170439155019704 1 0.0708599984645844 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75283698 chr11:75283708 . . 0 31 hm5C_associated_SNPs_9532 1 0 25 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:75283638-75283731
64251 chr11 76572065 76572065 1 + C G rs138662843 76572057 + 76572037 76572077 41 ACCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGGAC ACCGAGAGGGCTACTGGGGCCCCACGACGTCCACGCTGGAC < 41bp 1 0.300622497574711 1 0.159083187580109 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572057 chr11:76572065 synonymous SNV . 0 29 hm5C_associated_SNPs_9538 0 0 3 DDX3X POSTAR2 ENCODE chr11:76571941-76572115
64251 chr11 76572065 76572065 1 + C G rs138662843 76572058 + 76572038 76572078 41 CCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGGACT CCGAGAGGGCTACTGGGGCCCCACGACGTCCACGCTGGACT < 41bp 1 0.404466287076375 1 0.116502076387405 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572058 chr11:76572065 synonymous SNV . 0 28 hm5C_associated_SNPs_9539 0 0 3 DDX3X POSTAR2 ENCODE chr11:76571941-76572115
64251 chr11 77301385 77301385 1 + G A rs145642525 77301390 + 77301370 77301410 41 CATGTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGC CATGTCCCCCGAGACAGGTGCGGTGAGGCTATTGGCTCAGC < 41bp 1 0.514330236250941 1 0.442007303237915 experiment 0.971339527498118 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301390 chr11:77301385 synonymous SNV . 0 16 hm5C_associated_SNPs_9546 0 0 3 DDX3X POSTAR2 ENCODE chr11:77301368-77301391
64251 chr11 85339638 85339638 1 + C T rs577525231 85339644 + 85339624 85339664 41 CCACCGGCAAGTCACATGAGCCACCAAAATGGTGGTGTTCG CCACCGGCAAGTCATATGAGCCACCAAAATGGTGGTGTTCG < 41bp 1 0.136662230211626 1 0.0406516790390015 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM126B ENSG00000171204 UTR5 Human protein_coding chr11:85339644 chr11:85339638 . . 0 15 hm5C_associated_SNPs_9547 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr11:85339638-85339639
64251 chr11 85339638 85339638 1 + C T rs577525231 85339645 + 85339625 85339665 41 CACCGGCAAGTCACATGAGCCACCAAAATGGTGGTGTTCGG CACCGGCAAGTCATATGAGCCACCAAAATGGTGGTGTTCGG < 41bp 1 0.762104311851186 1 0.189929097890854 experiment 0.475791376297628 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM126B ENSG00000171204 UTR5 Human protein_coding chr11:85339645 chr11:85339638 . . 0 14 hm5C_associated_SNPs_9548 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr11:85339638-85339639
64251 chr11 86663296 86663296 1 - G A rs61735303 86663294 - 86663274 86663314 41 CCAGGTGATGAAGAGGTGCCCTTACCTCACAAAACCCCCAT CCAGGTGATGAAGAGGTGTCCTTACCTCACAAAACCCCCAT < 41bp 1 0.167942186188412 1 0.0463884174823761 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663294 chr11:86663296 nonsynonymous SNV 0.991 1 19 hm5C_associated_SNPs_9549 2 0 5 EIF3H POSTAR2 ENCODE chr11:86663246-86663300
64251 chr11 86663296 86663296 1 - G A rs61735303 86663313 - 86663293 86663333 41 CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTGCCCT CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTGTCCT < 41bp 1 0.695523486652451 1 0.684495508670807 experiment 0.608953026695098 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663313 chr11:86663296 nonsynonymous SNV 0.991 1 38 hm5C_associated_SNPs_9550 2 0 5 EIF3H POSTAR2 ENCODE chr11:86663246-86663300
64251 chr11 93412665 93412665 1 + G C rs150862789 93412674 + 93412654 93412694 41 TGGAACGGTTTGAAAAGGCACATGTACGGGGATTCCAAGCA TGGAACGGTTTCAAAAGGCACATGTACGGGGATTCCAAGCA < 41bp 1 0.179139910175671 1 0.0899163484573364 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP295 ENSG00000166004 CDS Human protein_coding chr11:93412674 chr11:93412665 nonsynonymous SNV 0.996 4 12 hm5C_associated_SNPs_9551 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:93412600-93412680
64251 chr11 93421014 93421014 1 + C T rs60226346 93421028 + 93421008 93421048 41 CGTTATCCTCTGGGCAGGAACAAGGTATTTCTCTCCAAGAG CGTTATTCTCTGGGCAGGAACAAGGTATTTCTCTCCAAGAG < 41bp 1 0.630204614628552 1 0.800123810768127 experiment 0.739590770742896 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP295 ENSG00000166004 CDS Human protein_coding chr11:93421028 chr11:93421014 nonsynonymous SNV 0.255 2 7 hm5C_associated_SNPs_9552 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:93420997-93421022
64251 chr11 94532777 94532777 1 + A G rs200856535 94532760 + 94532740 94532780 41 TGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCACGG TGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCGCGG < 41bp 1 0.164472016675187 1 0.410263746976852 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94532760 chr11:94532777 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_9555 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:94532741-94532777
64251 chr11 94533475 94533475 1 + G A rs373004473 94533474 + 94533454 94533494 41 ACCCCCTGAGTATGGGGTAACGAGGTGATTATCAACTGCAG ACCCCCTGAGTATGGGGTAACAAGGTGATTATCAACTGCAG < 41bp 1 0.619314839050238 1 0.667797088623047 experiment 0.761370321899524 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94533474 chr11:94533475 synonymous SNV . 0 22 hm5C_associated_SNPs_9556 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:94533464-94533493
64251 chr11 94609618 94609618 1 + A G rs527321102 94609610 + 94609590 94609630 41 TCTTCCCAGCAGACTGGTATCTGGCTGTAACGTTTGACGTC TCTTCCCAGCAGACTGGTATCTGGCTGTGACGTTTGACGTC < 41bp 1 0.629124890118264 1 0.447027325630188 experiment 0.741750219763471 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMOTL1 ENSG00000256469 ncRNA_intronic Human antisense chr11:94609610 chr11:94609618 . . 0 29 hm5C_associated_SNPs_9557 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:94609582-94609625
64251 chr11 94865068 94865068 1 + G T rs533669 94865048 + 94865028 94865068 41 GTCTATTTATTCTTGGGTGGCCAGTTTTGAAACCTAAAAAG GTCTATTTATTCTTGGGTGGCCAGTTTTGAAACCTAAAAAT < 41bp 1 0.252245039137714 1 0.146006435155869 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865048 chr11:94865068 . . 0 41 hm5C_associated_SNPs_9558 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:94865063-94865111
64251 chr11 94865068 94865068 1 + G T rs533669 94865049 + 94865029 94865069 41 TCTATTTATTCTTGGGTGGCCAGTTTTGAAACCTAAAAAGG TCTATTTATTCTTGGGTGGCCAGTTTTGAAACCTAAAAATG < 41bp 1 0.244567614828189 1 0.233702749013901 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ENDOD1 ENSG00000149218 UTR3 Human protein_coding chr11:94865049 chr11:94865068 . . 0 40 hm5C_associated_SNPs_9559 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:94865063-94865111
64251 chr11 95561121 95561121 1 + T A rs544014488 95561126 + 95561106 95561146 41 GTAACACCTCCCTCCTCCAACGGTATTAATGAGGAGTTGTC GTAACACCTCCCTCCACCAACGGTATTAATGAGGAGTTGTC < 41bp 1 0.644432195557484 1 0.15321871638298 experiment 0.711135608885032 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95561126 chr11:95561121 nonsynonymous SNV 0.092 1 16 hm5C_associated_SNPs_9560 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:95561102-95561127
64251 chr11 96123211 96123211 1 + G C rs185050228 96123222 + 96123202 96123242 41 AGTCAGGGAGCTGTGCGGGTCCTGGTTGCAAGAGAGGTGGG AGTCAGGGACCTGTGCGGGTCCTGGTTGCAAGAGAGGTGGG < 41bp 1 0.676508943394428 1 0.151291370391846 experiment 0.646982113211144 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control JRKL ENSG00000183340 UTR5 Human protein_coding chr11:96123222 chr11:96123211 . . 0 10 hm5C_associated_SNPs_9561 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:96123203-96123229
64251 chr11 96123231 96123231 1 + A G rs56062767 96123222 + 96123202 96123242 41 AGTCAGGGAGCTGTGCGGGTCCTGGTTGCAAGAGAGGTGGG AGTCAGGGAGCTGTGCGGGTCCTGGTTGCGAGAGAGGTGGG < 41bp 1 0.712333647158512 1 0.175278604030609 experiment 0.575332705682976 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control JRKL ENSG00000183340 UTR5 Human protein_coding chr11:96123222 chr11:96123231 . . 0 30 hm5C_associated_SNPs_9562 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr11:96123200-96123233
64251 chr11 107917087 107917087 1 + A G rs7117111 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGTTTATTAAGCAGGCACAGGCAGTAAGTTCTACATGC < 41bp 1 0.37547778058855 1 0.351598083972931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917087 synonymous SNV . 0 17 hm5C_associated_SNPs_9563 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr11 107968470 107968470 1 + G T rs186168658 107968473 + 107968453 107968493 41 TTCTCAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA TTCTCAGTGAACCAGGATTTCAGTTTAATGTAAGCTCGTTA < 41bp 1 0.346106285558335 1 0.179953306913376 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968473 chr11:107968470 nonsynonymous SNV 1.000 0 18 hm5C_associated_SNPs_9564 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr11 107975265 107975265 1 + A G rs7112974 107975249 + 107975229 107975269 41 TCTGCCTTACCTTACAAAAACAACTATATTTTGCCAATCAC TCTGCCTTACCTTACAAAAACAACTATATTTTGCCAGTCAC < 41bp 1 0.293210344605605 1 0.338236212730408 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUL5 ENSG00000166266 UTR3 Human protein_coding chr11:107975249 chr11:107975265 . . 0 37 hm5C_associated_SNPs_9565 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr11:107975247-107975268
64251 chr11 107976579 107976579 1 + G C rs188854772 107976573 + 107976553 107976593 41 AGATAGTAGGAAATGGAGTACAGAAAGGCATACAGTATTAT AGATAGTAGGAAATGGAGTACAGAAACGCATACAGTATTAT < 41bp 1 0.582580200896768 1 0.442966312170029 experiment 0.834839598206464 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CUL5 ENSG00000255467 ncRNA_intronic Human antisense chr11:107976573 chr11:107976579 . . 0 27 hm5C_associated_SNPs_9566 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:107976555-107976591
64251 chr11 108196134 108196134 1 + A G rs545873723 108196145 + 108196125 108196165 41 GAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCT GAGCCTATCGTGGCTCTACGCACAGTCATTTTGGAGATCCT < 41bp 1 0.326226320134275 1 0.121269881725311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108196145 chr11:108196134 nonsynonymous SNV 0.999 2 10 hm5C_associated_SNPs_9567 1 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:108196120-108196141
64251 chr11 111600434 111600434 1 + T C rs143685795 111600420 + 111600400 111600440 41 GCCCCCATTTTGGTCAAGCACAGGGTGAATGTGATATTGTT GCCCCCATTTTGGTCAAGCACAGGGTGAATGTGACATTGTT < 41bp 1 0.606503951157502 1 0.549300193786621 experiment 0.786992097684995 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP2R1B ENSG00000170145 UTR3 Human protein_coding chr11:111600420 chr11:111600434 . . 0 35 hm5C_associated_SNPs_9592 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:111600412-111600444
64251 chr11 117039797 117039797 1 + G A rs1060211 117039792 + 117039772 117039812 41 GCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCTTATTG GCTGGGATTACAGGCATGAGCCACCATGCCTGGCCTTATTG < 41bp 1 0.352378097641262 1 0.0296897292137146 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PAFAH1B2 ENSG00000168092 UTR3 Human protein_coding chr11:117039792 chr11:117039797 . . 0 26 hm5C_associated_SNPs_9594 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:117039791-117039818
64251 chr11 118267079 118267079 1 + G A rs141017463 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CCCCTCACCATGGACCAGATCCAGCCAAACACAGAACTAAA < 41bp 1 0.158140810048659 1 0.242723673582077 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267079 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_9597 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118267033-118267106
64251 chr11 118277742 118277742 1 + G C rs181465227 118277750 + 118277730 118277770 41 CTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTC CTGAGATCCCTACAGCTATTCAGAGCCTGAAAAAAATAGTC < 41bp 1 0.663109113953832 1 0.718759059906006 experiment 0.673781772092337 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277750 chr11:118277742 nonsynonymous SNV 0.999 0 13 hm5C_associated_SNPs_9598 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118277663-118277742
64251 chr11 118277770 118277770 1 + C T rs148370674 118277750 + 118277730 118277770 41 CTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTC CTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTT < 41bp 1 0.664082744612089 1 0.824116468429565 experiment 0.671834510775823 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277750 chr11:118277770 synonymous SNV . 0 41 hm5C_associated_SNPs_9599 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118277740-118277773
64251 chr11 118307316 118307316 1 + C G rs9332745 118307314 + 118307294 118307334 41 GGGCGCCGGGGCCTAGGGGGCGCCCCGCGGCAACGCGTCCC GGGCGCCGGGGCCTAGGGGGCGGCCCGCGGCAACGCGTCCC < 41bp 1 0.688520080032701 1 0.732783198356628 experiment 0.622959839934599 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307314 chr11:118307316 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_9600 2 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:118307316-118307317
64251 chr11 118307316 118307316 1 + C G rs9332745 118307317 + 118307297 118307337 41 CGCCGGGGCCTAGGGGGCGCCCCGCGGCAACGCGTCCCGGC CGCCGGGGCCTAGGGGGCGGCCCGCGGCAACGCGTCCCGGC < 41bp 1 0.413890131942082 1 0.51409900188446 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307317 chr11:118307316 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_9601 2 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:118307316-118307317
64251 chr11 118307385 118307385 1 + C T rs9332747 118307387 + 118307367 118307407 41 GCGGTGGCGGCCCCGGGGCGCCCCCCTCCCCCCCGGCTGTG GCGGTGGCGGCCCCGGGGTGCCCCCCTCCCCCCCGGCTGTG < 41bp 1 0.240183019994584 1 0.0824283361434937 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307387 chr11:118307385 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_9602 1 0 2 GEMIN5 POSTAR2 ENCODE chr11:118307363-118307422
64251 chr11 118307385 118307385 1 + C T rs9332747 118307388 + 118307368 118307408 41 CGGTGGCGGCCCCGGGGCGCCCCCCTCCCCCCCGGCTGTGG CGGTGGCGGCCCCGGGGTGCCCCCCTCCCCCCCGGCTGTGG < 41bp 1 0.289258141006999 1 0.34343022108078 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307388 chr11:118307385 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_9603 1 0 2 GEMIN5 POSTAR2 ENCODE chr11:118307363-118307422
64251 chr11 118307385 118307385 1 + C T rs9332747 118307389 + 118307369 118307409 41 GGTGGCGGCCCCGGGGCGCCCCCCTCCCCCCCGGCTGTGGC GGTGGCGGCCCCGGGGTGCCCCCCTCCCCCCCGGCTGTGGC < 41bp 1 0.383325272392672 1 0.362301558256149 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307389 chr11:118307385 nonsynonymous SNV 0.998 2 17 hm5C_associated_SNPs_9604 1 0 2 GEMIN5 POSTAR2 ENCODE chr11:118307363-118307422
64251 chr11 118307385 118307385 1 + C T rs9332747 118307390 + 118307370 118307410 41 GTGGCGGCCCCGGGGCGCCCCCCTCCCCCCCGGCTGTGGCG GTGGCGGCCCCGGGGTGCCCCCCTCCCCCCCGGCTGTGGCG < 41bp 1 0.0996432890799631 1 0.803765296936035 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307390 chr11:118307385 nonsynonymous SNV 0.998 2 16 hm5C_associated_SNPs_9605 1 0 2 GEMIN5 POSTAR2 ENCODE chr11:118307363-118307422
64251 chr11 118355642 118355642 1 + A C rs9332801 118355660 + 118355640 118355680 41 ATAACACCCAGGGTGGTTTGCTTTCTCTGTGCCAGTAGTGG ATCACACCCAGGGTGGTTTGCTTTCTCTGTGCCAGTAGTGG < 41bp 1 0.015073362382366 1 0.0388703346252441 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118355660 chr11:118355642 synonymous SNV . 0 3 hm5C_associated_SNPs_9606 1 1 3 DDX6 POSTAR2 ENCODE chr11:118355637-118355682
64251 chr11 118367007 118367007 1 + G T rs565762131 118367013 + 118366993 118367033 41 GAAGACAGTCCAGAGCTGAACCCACCCCCAGGCATAGAAGA GAAGACAGTCCAGATCTGAACCCACCCCCAGGCATAGAAGA < 41bp 1 0.0241176481286186 1 0.0279262363910675 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118367013 chr11:118367007 nonsynonymous SNV 0.997 2 15 hm5C_associated_SNPs_9607 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118366963-118367039
64251 chr11 118393656 118393656 1 + C T rs9332870 118393672 + 118393652 118393692 41 CTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACA CTTTTGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACA < 41bp 1 0.16272385394163 1 0.0737103223800659 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC101929089 ENSG00000255435 ncRNA_intronic Human antisense chr11:118393672 chr11:118393656 . . 0 5 hm5C_associated_SNPs_9608 0 0 28 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:118393640-118393660
64251 chr11 118393656 118393656 1 + C T rs9332870 118393676 + 118393656 118393696 41 CGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACACTCC TGGGTTGTAGGGGAGACTGACTGCCTGCTCAAGGACACTCC < 41bp 1 0.252962360624822 1 0.259041905403137 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC101929089 ENSG00000255435 ncRNA_intronic Human antisense chr11:118393676 chr11:118393656 . . 0 1 hm5C_associated_SNPs_9609 0 0 28 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:118393640-118393660
64251 chr11 118471563 118471563 1 + G A rs553165575 118471576 + 118471556 118471596 41 TCTCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAG TCTCTGCACGCAAGGACCCTCGACTCACCCCCATGTTTCAG < 41bp 1 0.489521201325599 1 0.0822188556194305 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARCN1 ENSG00000095139 UTR3 Human protein_coding chr11:118471576 chr11:118471563 . . 0 8 hm5C_associated_SNPs_9616 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:118471483-118471610
64251 chr11 118471577 118471577 1 + G A rs79329602 118471576 + 118471556 118471596 41 TCTCTGCGCGCAAGGACCCTCGACTCACCCCCATGTTTCAG TCTCTGCGCGCAAGGACCCTCAACTCACCCCCATGTTTCAG < 41bp 1 0.470301801340722 1 0.159861385822296 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARCN1 ENSG00000095139 UTR3 Human protein_coding chr11:118471576 chr11:118471577 . . 0 22 hm5C_associated_SNPs_9617 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:118471483-118471610
64251 chr11 118955679 118955679 1 + C T rs589925 118955678 + 118955658 118955698 41 CGGTACTCGCCGGCCGGAGCCCCCGGCTTCCCGGGGCCGGG CGGTACTCGCCGGCCGGAGCCTCCGGCTTCCCGGGGCCGGG < 41bp 1 0.685972681193949 1 0.518853843212128 experiment 0.628054637612101 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMBS ENSG00000256269 UTR5 Human protein_coding chr11:118955678 chr11:118955679 . . 0 22 hm5C_associated_SNPs_9620 1 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:118955660-118955700
64251 chr11 118955679 118955679 1 + C T rs589925 118955681 + 118955661 118955701 41 TACTCGCCGGCCGGAGCCCCCGGCTTCCCGGGGCCGGGGGA TACTCGCCGGCCGGAGCCTCCGGCTTCCCGGGGCCGGGGGA < 41bp 1 0.64530422467517 1 0.770762085914612 experiment 0.709391550649661 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMBS ENSG00000256269 UTR5 Human protein_coding chr11:118955681 chr11:118955679 . . 0 19 hm5C_associated_SNPs_9621 1 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:118955660-118955700
64251 chr11 118955679 118955679 1 + C T rs589925 118955694 + 118955674 118955714 41 GAGCCCCCGGCTTCCCGGGGCCGGGGGACCTTAGCGGCACC GAGCCTCCGGCTTCCCGGGGCCGGGGGACCTTAGCGGCACC < 41bp 1 0.642054535364829 1 0.796288728713989 experiment 0.715890929270342 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMBS ENSG00000256269 UTR5 Human protein_coding chr11:118955694 chr11:118955679 . . 0 6 hm5C_associated_SNPs_9622 1 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:118955660-118955700
64251 chr11 118978411 118978411 1 + G C rs7940073 118978396 + 118978376 118978416 41 CGGCCCGCCCGGGCCATGCTCCCCCGGGGCAGCGGGTGAGC CGGCCCGCCCGGGCCATGCTCCCCCGGGGCAGCGGCTGAGC < 41bp 1 0.520775705105558 1 0.139415085315704 experiment 0.958448589788883 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control C2CD2L ENSG00000172269;ENSG00000172375 UTR5 Human other chr11:118978396 chr11:118978411 . . 0 36 hm5C_associated_SNPs_9623 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118978351-118978444
64251 chr11 118978411 118978411 1 + G C rs7940073 118978397 + 118978377 118978417 41 GGCCCGCCCGGGCCATGCTCCCCCGGGGCAGCGGGTGAGCC GGCCCGCCCGGGCCATGCTCCCCCGGGGCAGCGGCTGAGCC < 41bp 1 0.587013284470868 1 0.600263357162476 experiment 0.825973431058264 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control C2CD2L ENSG00000172269;ENSG00000172375 UTR5 Human other chr11:118978397 chr11:118978411 . . 0 35 hm5C_associated_SNPs_9624 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118978351-118978444
64251 chr11 118978411 118978411 1 + G C rs7940073 118978405 + 118978385 118978425 41 CGGGCCATGCTCCCCCGGGGCAGCGGGTGAGCCCCAGCCGG CGGGCCATGCTCCCCCGGGGCAGCGGCTGAGCCCCAGCCGG < 41bp 1 0.777076590486661 1 0.618042647838593 experiment 0.445846819026678 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control C2CD2L ENSG00000172269;ENSG00000172375 UTR5 Human other chr11:118978405 chr11:118978411 . . 0 27 hm5C_associated_SNPs_9625 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118978351-118978444
64251 chr11 118997714 118997714 1 + G A rs143017588 118997717 + 118997697 118997737 41 CTACAGTGTGAGTGGGGGTCCTGCTCCTTTGTGTGCTCAAC CTACAGTGTGAGTGGGGATCCTGCTCCTTTGTGTGCTCAAC < 41bp 1 0.453063762100602 1 0.437907576560974 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HINFP ENSG00000172273 CDS Human protein_coding chr11:118997717 chr11:118997714 synonymous SNV . 0 18 hm5C_associated_SNPs_9626 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:118997687-118997731
64251 chr11 119077032 119077032 1 + G A rs548262208 119077043 + 119077023 119077063 41 GCGGCGGCGGCCGGGAGAGGCCCCTCCTTCACGCCCTGCTT GCGGCGGCGACCGGGAGAGGCCCCTCCTTCACGCCCTGCTT < 41bp 1 0.314194659959602 1 0.11103281378746 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CBL ENSG00000110395 UTR5 Human protein_coding chr11:119077043 chr11:119077032 . . 0 10 hm5C_associated_SNPs_9629 1 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:119077032-119077033
64251 chr11 119170480 119170480 1 + G A rs17122769 119170488 + 119170468 119170508 41 TCTCCTGCCCATGTAGCTACCTAGCACACCATCTCCCTGCT TCTCCTGCCCATATAGCTACCTAGCACACCATCTCCCTGCT < 41bp 1 0.225276825714389 1 0.051552414894104 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CBL ENSG00000110395 CDS Human protein_coding chr11:119170488 chr11:119170480 nonsynonymous SNV 0.992 1 13 hm5C_associated_SNPs_9630 3 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr11:119170456-119170480
64251 chr11 120280115 120280115 1 + A G rs190640580 120280127 + 120280107 120280147 41 CTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGAT CTCCTCCAGGAAGACAAAGTCTAGTTCAGAGGAGAGTAGAT < 41bp 1 0.232227013579753 1 0.424672454595566 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120280127 chr11:120280115 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_9636 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:120280094-120280115
64251 chr11 120352081 120352081 1 + C T rs35811219 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCCATGACAGGCATCCCTGCTGTGGAATCTACCCACC < 41bp 1 0.611960767487394 1 0.138664215803146 experiment 0.776078465025212 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352081 synonymous SNV . 0 34 hm5C_associated_SNPs_9637 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:120352031-120352083
64251 chr11 120357341 120357341 1 + G A rs79425731 120357345 + 120357325 120357365 41 AACAAGGAGTTCATCCGTTGCTCACATCTTTCATTGGTGCC AACAAGGAGTTCATCCATTGCTCACATCTTTCATTGGTGCC < 41bp 1 0.105100682412223 1 0.240309566259384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF12 ENSG00000196914 UTR3 Human protein_coding chr11:120357345 chr11:120357341 . . 0 17 hm5C_associated_SNPs_9638 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:120357312-120357353
64251 chr11 122430662 122430662 1 + T G rs188672814 122430665 + 122430645 122430685 41 GTAATGGGTAGCCTGGATAGCTCAGTTGGTAGAGCATCAGA GTAATGGGTAGCCTGGAGAGCTCAGTTGGTAGAGCATCAGA < 41bp 1 0.531608161358473 1 0.297733247280121 experiment 0.936783677283055 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR100HG;UBASH3B ENSG00000253035;ENSG00000223265 intergenic Human other chr11:122430665 chr11:122430662 . . 0 18 hm5C_associated_SNPs_9640 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:122430646-122430684
64251 chr11 122430682 122430682 1 + C A rs11493813 122430665 + 122430645 122430685 41 GTAATGGGTAGCCTGGATAGCTCAGTTGGTAGAGCATCAGA GTAATGGGTAGCCTGGATAGCTCAGTTGGTAGAGCATAAGA < 41bp 1 0.589934710880631 1 0.247324079275131 experiment 0.820130578238737 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR100HG;UBASH3B ENSG00000253035;ENSG00000223265 intergenic Human other chr11:122430665 chr11:122430682 . . 0 38 hm5C_associated_SNPs_9641 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:122430646-122430684
64251 chr11 122430682 122430682 1 + C A rs11493813 122430686 + 122430666 122430706 41 TCAGTTGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTTGGTAGAGCATAAGACTTTTAATCTGAGGGTCCAGG < 41bp 1 0.0301246147049406 1 0.00469264388084412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR100HG;UBASH3B ENSG00000253035;ENSG00000223265 intergenic Human other chr11:122430686 chr11:122430682 . . 0 17 hm5C_associated_SNPs_9642 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:122430646-122430684
64251 chr11 124492796 124492796 1 + G A rs114302152 124492794 + 124492774 124492814 41 CACGGAAGTGCTGGGAGGCGCCGGGAGCCCGTTCGGTTGCG CACGGAAGTGCTGGGAGGCGCCAGGAGCCCGTTCGGTTGCG < 41bp 1 0.655728218470163 1 0.737667322158813 experiment 0.688543563059674 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBRG1 ENSG00000154144 UTR5 Human protein_coding chr11:124492794 chr11:124492796 . . 0 23 hm5C_associated_SNPs_9646 0 0 4 DDX3X POSTAR2 ENCODE chr11:124492783-124492963
64251 chr11 124500662 124500662 1 + G C rs147564095 124500660 + 124500640 124500680 41 GGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGAC GGGGGAAACTAATGCCTAACCTCCTTCCAGCTGGAGCTGAC < 41bp 1 0.661716834036285 1 0.364935547113419 experiment 0.67656633192743 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124500660 chr11:124500662 synonymous SNV . 0 23 hm5C_associated_SNPs_9647 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:124500662-124500687
64251 chr11 124616897 124616897 1 + G A rs554114488 124616901 + 124616881 124616921 41 CGCACTGTTGAGGGCAGCCTCTCCAGCTCTCTTGTTTATGC CGCACTGTTGAGGGCAACCTCTCCAGCTCTCTTGTTTATGC < 41bp 1 0.746804002279024 1 0.932327270507812 experiment 0.506391995441952 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRGN ENSG00000154146 UTR3 Human protein_coding chr11:124616901 chr11:124616897 . . 0 17 hm5C_associated_SNPs_9648 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:124616788-124616897
64251 chr11 125439384 125439384 1 + A G rs551704338 125439389 + 125439369 125439409 41 GCCCAGTGCGGGCGCAGCGGCCCCGGCCCTGGAAGCGCCCC GCCCAGTGCGGGCGCGGCGGCCCCGGCCCTGGAAGCGCCCC < 41bp 1 0.711334077305005 1 0.391529113054276 experiment 0.577331845389991 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EI24 ENSG00000149547 UTR5 Human protein_coding chr11:125439389 chr11:125439384 . . 0 16 hm5C_associated_SNPs_9650 0 0 10 DDX3X POSTAR2 ENCODE chr11:125439364-125439470
64251 chr11 125439384 125439384 1 + A G rs551704338 125439395 + 125439375 125439415 41 TGCGGGCGCAGCGGCCCCGGCCCTGGAAGCGCCCCGGCGGA TGCGGGCGCGGCGGCCCCGGCCCTGGAAGCGCCCCGGCGGA < 41bp 1 0.657146083056512 1 0.670785784721375 experiment 0.685707833886975 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EI24 ENSG00000149547 UTR5 Human protein_coding chr11:125439395 chr11:125439384 . . 0 10 hm5C_associated_SNPs_9651 0 0 10 DDX3X POSTAR2 ENCODE chr11:125439364-125439470
64251 chr11 125439384 125439384 1 + A G rs551704338 125439396 + 125439376 125439416 41 GCGGGCGCAGCGGCCCCGGCCCTGGAAGCGCCCCGGCGGAG GCGGGCGCGGCGGCCCCGGCCCTGGAAGCGCCCCGGCGGAG < 41bp 1 0.764164852419413 1 0.514892220497131 experiment 0.471670295161174 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EI24 ENSG00000149547 UTR5 Human protein_coding chr11:125439396 chr11:125439384 . . 0 9 hm5C_associated_SNPs_9652 0 0 10 DDX3X POSTAR2 ENCODE chr11:125439364-125439470
64251 chr11 125453890 125453890 1 + C T rs7094 125453884 + 125453864 125453904 41 GGAACACTTTGTTTTTCTCCCTGTGCCATTTACCCTTCCAC GGAACACTTTGTTTTTCTCCCTGTGCTATTTACCCTTCCAC < 41bp 1 0.389036417016503 1 0.0963094234466553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STT3A-AS1 ENSG00000254671 ncRNA_intronic Human antisense chr11:125453884 chr11:125453890 . . 0 27 hm5C_associated_SNPs_9653 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:125453880-125453900
64251 chr11 125482982 125482982 1 + T C rs34079079 125482974 + 125482954 125482994 41 CCAGTGAGGCCTACTCTTCTCCGTCCATTGTACTATCTGCC CCAGTGAGGCCTACTCTTCTCCGTCCATCGTACTATCTGCC < 41bp 1 0.0933496287426817 1 0.243051528930664 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125482974 chr11:125482982 synonymous SNV . 0 29 hm5C_associated_SNPs_9654 1 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:125482942-125482992
64251 chr11 126081700 126081700 1 + G A rs369602343 126081703 + 126081683 126081723 41 GCCGGTAGCTGCAGCTGGAGCAGTGGCGTTTGGAGGAGACT GCCGGTAGCTGCAGCTGAAGCAGTGGCGTTTGGAGGAGACT < 41bp 1 0.782302684850197 1 0.539082050323486 experiment 0.435394630299606 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM118B ENSG00000197798 UTR5 Human protein_coding chr11:126081703 chr11:126081700 . . 0 18 hm5C_associated_SNPs_9655 0 0 1 DDX3X POSTAR2 ENCODE chr11:126081658-126081726
64251 chr11 126143246 126143246 1 + G A rs34542988 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAATCGATGCTCCTCCCCTGGACCTCCGGTTCA < 41bp 1 0.491133041479878 1 0.115163952112198 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143246 nonsynonymous SNV 0.001 1 11 hm5C_associated_SNPs_9656 2 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr11:126143244-126143268
64251 chr11 126215298 126215298 1 + C T rs142492066 126215278 + 126215258 126215298 41 GCTACCGGATGAAGGGAGACCATCTGCGAGTATACCTGCAC GCTACCGGATGAAGGGAGACCATCTGCGAGTATACCTGCAT < 41bp 1 0.239699546534921 1 0.234757512807846 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DCPS ENSG00000110063 CDS Human protein_coding chr11:126215278 chr11:126215298 synonymous SNV . 0 41 hm5C_associated_SNPs_9658 0 0 1 LARP4 POSTAR2 ENCODE chr11:126215282-126215391
64251 chr11 129991553 129991553 1 + G A rs537248071 129991572 + 129991552 129991592 41 TGCTCCCATGTGGGGTAGACCAGTTCCATGGCACTGAATAT TACTCCCATGTGGGGTAGACCAGTTCCATGGCACTGAATAT < 41bp 1 0.141426880361133 1 0.222380101680756 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991572 chr11:129991553 synonymous SNV . 0 2 hm5C_associated_SNPs_9659 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:129991529-129991574
64251 chr11 129991606 129991606 1 + A G rs11822318 129991624 + 129991604 129991644 41 TCAGACAAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAG TCGGACAAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAG < 41bp 1 0.276257869517728 1 0.103152245283127 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout APLP2;APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991624 chr11:129991606 nonsynonymous SNV 0.914 1 3 hm5C_associated_SNPs_9660 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:129991561-129991608
64251 chr11 129991618 129991618 1 + T C rs370107772 129991624 + 129991604 129991644 41 TCAGACAAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAG TCAGACAAAGATTACTGGATCTGTGTCAAAAGAAGAGGAAG < 41bp 1 0.282316871884627 1 0.156728088855743 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991624 chr11:129991618 nonsynonymous SNV 0.044 1 15 hm5C_associated_SNPs_9661 0 0 37 HNRNPU POSTAR2 GSE34491,GSM850170 chr11:129991580-129991620
64251 chr11 129991618 129991618 1 + T C rs370107772 129991630 + 129991610 129991650 41 AAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAGAGGAAG AAAGATTACTGGATCTGTGTCAAAAGAAGAGGAAGAGGAAG < 41bp 1 0.475558560435481 1 0.724222302436829 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991630 chr11:129991618 nonsynonymous SNV 0.044 1 9 hm5C_associated_SNPs_9662 0 0 37 HNRNPU POSTAR2 GSE34491,GSM850170 chr11:129991580-129991620
64251 chr11 129991646 129991646 1 + G T rs199857117 129991630 + 129991610 129991650 41 AAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAGAGGAAG AAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAGATGAAG < 41bp 1 0.447547392924097 1 0.620107412338257 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991630 chr11:129991646 nonsynonymous SNV 0.130 1 37 hm5C_associated_SNPs_9663 0 0 50 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:129991600-129991680
64251 chr11 130005552 130005552 1 + T C rs138762568 130005561 + 130005541 130005581 41 TCTGAGGAGAGTGAGGAGATCCCACCGTTCCACCCCTTCCA TCTGAGGAGAGCGAGGAGATCCCACCGTTCCACCCCTTCCA < 41bp 1 0.320038647091851 1 0.147471010684967 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130005561 chr11:130005552 synonymous SNV . 0 12 hm5C_associated_SNPs_9664 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:130005520-130005560
64251 chr11 134020750 134020750 1 + C A rs530777526 134020762 + 134020742 134020782 41 TTAAAGAACGTCAGGTGGAGCAGCCAGGTGAAAGGCCTGGC TTAAAGAAAGTCAGGTGGAGCAGCCAGGTGAAAGGCCTGGC < 41bp 1 0.660790736884131 1 0.376302182674408 experiment 0.678418526231737 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control JAM3 ENSG00000166086 UTR3 Human protein_coding chr11:134020762 chr11:134020750 . . 0 9 hm5C_associated_SNPs_9665 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:134020737-134020771
64251 chr11 134244123 134244123 1 + C A rs3741097 134244119 + 134244099 134244139 41 GGGTAGCTTGTCCATCAGCTCCACCCCTTGTGACACCTTTC GGGTAGCTTGTCCATCAGCTCCACACCTTGTGACACCTTTC < 41bp 1 0.204685930105134 1 0.0383476614952087 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134244119 chr11:134244123 synonymous SNV . 0 25 hm5C_associated_SNPs_9666 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:134244112-134244133
64251 chr12 551506 551506 1 + C T rs149182859 551491 + 551471 551511 41 AGAAGCACTCACAGAGGCTGCCTTTCTCCTGAGCTCGGGGA AGAAGCACTCACAGAGGCTGCCTTTCTCCTGAGCTTGGGGA < 41bp 1 0.0457943089098087 1 0.0402143895626068 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC77 ENSG00000120647 UTR3 Human protein_coding chr12:551491 chr12:551506 . . 0 36 hm5C_associated_SNPs_9667 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:551503-551525
64251 chr12 987482 987482 1 + G A rs1012729 987472 + 987452 987492 41 TGAGGCCACTACTGCACAGCCAGTGAGTCAGCCTCAAGCTC TGAGGCCACTACTGCACAGCCAGTGAGTCAACCTCAAGCTC < 41bp 1 0.317875309723207 1 0.0552375316619873 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:987472 chr12:987482 synonymous SNV . 0 31 hm5C_associated_SNPs_9668 3 0 2 IGF2BP1 POSTAR2 ENCODE chr12:987438-987500
64251 chr12 987482 987482 1 + G A rs1012729 987483 + 987463 987503 41 CTGCACAGCCAGTGAGTCAGCCTCAAGCTCCACAAGTCTTG CTGCACAGCCAGTGAGTCAACCTCAAGCTCCACAAGTCTTG < 41bp 1 0.176001497777923 1 0.0226494967937469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:987483 chr12:987482 synonymous SNV . 0 20 hm5C_associated_SNPs_9669 3 0 2 IGF2BP1 POSTAR2 ENCODE chr12:987438-987500
64251 chr12 1005644 1005644 1 + G A rs61736907 1005625 + 1005605 1005645 41 GGAACAAGCTGTTCTTCCTGCTGTGATACCAAAGAAAGAGA GGAACAAGCTGTTCTTCCTGCTGTGATACCAAAGAAAGAAA < 41bp 1 0.131991588587489 1 0.458604723215103 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:1005625 chr12:1005644 synonymous SNV . 0 40 hm5C_associated_SNPs_9670 2 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:1005512-1005658
64251 chr12 1890199 1890199 1 + G A rs16928751 1890217 + 1890197 1890237 41 CAGTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAG CAATGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAG < 41bp 1 0.0485552756075317 1 0.0339580774307251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890217 chr12:1890199 synonymous SNV . 0 3 hm5C_associated_SNPs_9671 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:1890165-1890201
64251 chr12 1890199 1890199 1 + G A rs16928751 1890218 + 1890198 1890238 41 AGTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGA AATGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGA < 41bp 1 0.271080237329274 1 0.0685460865497589 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890218 chr12:1890199 synonymous SNV . 0 2 hm5C_associated_SNPs_9672 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:1890165-1890201
64251 chr12 1890199 1890199 1 + G A rs16928751 1890219 + 1890199 1890239 41 GTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAG ATGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAG < 41bp 1 0.520369245485278 1 0.521678805351257 experiment 0.959261509029445 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890219 chr12:1890199 synonymous SNV . 0 1 hm5C_associated_SNPs_9673 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:1890165-1890201
64251 chr12 1896956 1896956 1 + C T rs1044471 1896973 + 1896953 1896993 41 TCCCTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGG TCCTTTGCCCTTGCAATCTCCAGCAAAAGGTGGGATCTAGG < 41bp 1 0.527515768537597 1 0.813740015029907 experiment 0.944968462924807 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADIPOR2 ENSG00000006831 UTR3 Human protein_coding chr12:1896973 chr12:1896956 . . 0 4 hm5C_associated_SNPs_9674 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:1896923-1896961
64251 chr12 2939489 2939489 1 + A G rs191933112 2939487 + 2939467 2939507 41 GGGAATTTATTGCGAATGTTCAATAGTGACTGAGTGGTTAA GGGAATTTATTGCGAATGTTCAGTAGTGACTGAGTGGTTAA < 41bp 1 0.5390319140645 1 0.413767784833908 experiment 0.921936171871 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NRIP2 ENSG00000111203 UTR3 Human protein_coding chr12:2939487 chr12:2939489 . . 0 23 hm5C_associated_SNPs_9675 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:2939437-2939530
64251 chr12 3389559 3389559 1 + C A rs877089 3389553 + 3389533 3389573 41 CCCTCCGCCTGGCAGGTGAACGAGAACGCCAAGAAGGACCT CCCTCCGCCTGGCAGGTGAACGAGAAAGCCAAGAAGGACCT < 41bp 1 0.769322853116451 1 0.567544102668762 experiment 0.461354293767098 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3389553 chr12:3389559 nonsynonymous SNV 0.972 1 27 hm5C_associated_SNPs_9676 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704216 chr12:3389540-3389560
64251 chr12 3393631 3393631 1 + G A rs143741332 3393615 + 3393595 3393635 41 CCTGGGGCCACGGACATCAGCAGTGGGTTGGGTGGCGATTA CCTGGGGCCACGGACATCAGCAGTGGGTTGGGTGGCAATTA < 41bp 1 0.570142837785594 1 0.764982342720032 experiment 0.859714324428812 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TSPAN9 ENSG00000011105 UTR3 Human protein_coding chr12:3393615 chr12:3393631 . . 0 37 hm5C_associated_SNPs_9677 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:3393617-3393644
64251 chr12 4459032 4459032 1 + G A rs7309402 4459031 + 4459011 4459051 41 CAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGAC CAAATTTTGCAAAGATATGACAGTAAAGTATGACTCAAGAC < 41bp 1 0.419445558427085 1 0.320029616355896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIGAR ENSG00000078237 CDS Human protein_coding chr12:4459031 chr12:4459032 synonymous SNV . 0 22 hm5C_associated_SNPs_9678 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:4459029-4459049
64251 chr12 6309560 6309560 1 + G A rs533854109 6309558 + 6309538 6309578 41 TTAAAAGTGCAGCCGGAGACCAGCCTACAGCCGCCTGCATC TTAAAAGTGCAGCCGGAGACCAACCTACAGCCGCCTGCATC < 41bp 1 0.358619096369343 1 0.0904938280582428 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CD9 ENSG00000010278 UTR5 Human protein_coding chr12:6309558 chr12:6309560 . . 0 23 hm5C_associated_SNPs_9680 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:6309560-6309620
64251 chr12 6344415 6344415 1 + G A rs542130343 6344427 + 6344407 6344447 41 GTCCAGGAGTTTTACAAGGACACCTACAACAAGCTGAAAAC GTCCAGGAATTTTACAAGGACACCTACAACAAGCTGAAAAC < 41bp 1 0.351270997862004 1 0.347819030284882 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD9 ENSG00000010278 CDS Human protein_coding chr12:6344427 chr12:6344415 synonymous SNV . 0 9 hm5C_associated_SNPs_9681 0 0 7 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr12:6344405-6344426
64251 chr12 6619402 6619402 1 + T A rs714775 6619392 + 6619372 6619412 41 TTCCTACATTTTGTCAGCCACATGATGATATCAAGGCTGTT TTCCTACATTTTGTCAGCCACATGATGATAACAAGGCTGTT < 41bp 1 0.198205068751896 1 0.103689640760422 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619392 chr12:6619402 . . 0 31 hm5C_associated_SNPs_9682 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619387-6619410
64251 chr12 6619402 6619402 1 + T A rs714775 6619403 + 6619383 6619423 41 TGTCAGCCACATGATGATATCAAGGCTGTTGTGATTCAGTT TGTCAGCCACATGATGATAACAAGGCTGTTGTGATTCAGTT < 41bp 1 0.467953792976632 1 0.390171617269516 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619403 chr12:6619402 . . 0 20 hm5C_associated_SNPs_9683 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619387-6619410
64251 chr12 6619402 6619402 1 + T A rs714775 6619408 + 6619388 6619428 41 GCCACATGATGATATCAAGGCTGTTGTGATTCAGTTGGTTT GCCACATGATGATAACAAGGCTGTTGTGATTCAGTTGGTTT < 41bp 1 0.0991398117270071 1 0.0602985918521881 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619408 chr12:6619402 . . 0 15 hm5C_associated_SNPs_9684 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619387-6619410
64251 chr12 6619402 6619402 1 + T A rs714775 6619419 + 6619399 6619439 41 ATATCAAGGCTGTTGTGATTCAGTTGGTTTGGCTAAGCCCA ATAACAAGGCTGTTGTGATTCAGTTGGTTTGGCTAAGCCCA < 41bp 1 0.230078982501848 1 0.378766000270844 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619419 chr12:6619402 . . 0 4 hm5C_associated_SNPs_9685 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619387-6619410
64251 chr12 6619522 6619522 1 + G C rs138128987 6619502 + 6619482 6619522 41 TACAGAGTTATGTGTGTTCACTGTAAGGGCAGACCAACAAG TACAGAGTTATGTGTGTTCACTGTAAGGGCAGACCAACAAC < 41bp 1 0.526330512158692 1 0.241849631071091 experiment 0.947338975682615 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619502 chr12:6619522 . . 0 41 hm5C_associated_SNPs_9686 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619511 + 6619491 6619531 41 ATGTGTGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTC ATGTGTGTTCACTGTAAGGGCAGACCAACAACAACTTTTTC < 41bp 1 0.0972631056313068 1 0.2369544506073 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619511 chr12:6619522 . . 0 32 hm5C_associated_SNPs_9687 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619515 + 6619495 6619535 41 GTGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTAC GTGTTCACTGTAAGGGCAGACCAACAACAACTTTTTCCTAC < 41bp 1 0.0492914041267072 1 0.319244593381882 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619515 chr12:6619522 . . 0 28 hm5C_associated_SNPs_9688 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619516 + 6619496 6619536 41 TGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACT TGTTCACTGTAAGGGCAGACCAACAACAACTTTTTCCTACT < 41bp 1 0.455648107100079 1 0.387143135070801 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619516 chr12:6619522 . . 0 27 hm5C_associated_SNPs_9689 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619519 + 6619499 6619539 41 TCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACTTTT TCACTGTAAGGGCAGACCAACAACAACTTTTTCCTACTTTT < 41bp 1 0.288797743259532 1 0.229980498552322 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619519 chr12:6619522 . . 0 24 hm5C_associated_SNPs_9690 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619525 + 6619505 6619545 41 TAAGGGCAGACCAACAAGAACTTTTTCCTACTTTTGAGCTA TAAGGGCAGACCAACAACAACTTTTTCCTACTTTTGAGCTA < 41bp 1 0.0397333100201432 1 0.0371476411819458 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619525 chr12:6619522 . . 0 18 hm5C_associated_SNPs_9691 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619531 + 6619511 6619551 41 CAGACCAACAAGAACTTTTTCCTACTTTTGAGCTACCTCTT CAGACCAACAACAACTTTTTCCTACTTTTGAGCTACCTCTT < 41bp 1 0.0199275660491663 1 0.109167873859406 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619531 chr12:6619522 . . 0 12 hm5C_associated_SNPs_9692 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619532 + 6619512 6619552 41 AGACCAACAAGAACTTTTTCCTACTTTTGAGCTACCTCTTT AGACCAACAACAACTTTTTCCTACTTTTGAGCTACCTCTTT < 41bp 1 0.123232891755098 1 0.0694769024848938 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619532 chr12:6619522 . . 0 11 hm5C_associated_SNPs_9693 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619522 6619522 1 + G C rs138128987 6619535 + 6619515 6619555 41 CCAACAAGAACTTTTTCCTACTTTTGAGCTACCTCTTTTTA CCAACAACAACTTTTTCCTACTTTTGAGCTACCTCTTTTTA < 41bp 1 0.0153335246426445 1 0.0228356719017029 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619535 chr12:6619522 . . 0 8 hm5C_associated_SNPs_9694 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619511-6619540
64251 chr12 6619630 6619630 1 + A G rs141234350 6619642 + 6619622 6619662 41 GCATGTTCAGGGTATCAGGGCCAAGGGTCCTAAAGGACTTA GCATGTTCGGGGTATCAGGGCCAAGGGTCCTAAAGGACTTA < 41bp 1 0.126683358736989 1 0.280286192893982 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619642 chr12:6619630 . . 0 9 hm5C_associated_SNPs_9695 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619620-6619640
64251 chr12 6619630 6619630 1 + A G rs141234350 6619643 + 6619623 6619663 41 CATGTTCAGGGTATCAGGGCCAAGGGTCCTAAAGGACTTAG CATGTTCGGGGTATCAGGGCCAAGGGTCCTAAAGGACTTAG < 41bp 1 0.591054060022223 1 0.740975439548492 experiment 0.817891879955555 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619643 chr12:6619630 . . 0 8 hm5C_associated_SNPs_9696 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619620-6619640
64251 chr12 6635478 6635478 1 + C A rs73259178 6635482 + 6635462 6635502 41 GGCAAACGTCACCCCCCCTTCCGGCTGCCTCAGGAACACAG GGCAAACGTCACCCCCACTTCCGGCTGCCTCAGGAACACAG < 41bp 1 0.338954604069429 1 0.356241315603256 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6635482 chr12:6635478 nonsynonymous SNV 0.777 4 17 hm5C_associated_SNPs_9697 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:6635466-6635495
64251 chr12 6640675 6640675 1 + T A rs571340759 6640693 + 6640673 6640713 41 TTTTTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT TTATTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT < 41bp 1 0.392497095899574 1 0.571279764175415 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 UTR3 Human protein_coding chr12:6640693 chr12:6640675 . . 0 3 hm5C_associated_SNPs_9698 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6640575-6640676
64251 chr12 6640676 6640676 1 + T A rs1043271 6640693 + 6640673 6640713 41 TTTTTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT TTTATAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT < 41bp 1 0.444542237479341 1 0.58227264881134 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 UTR3 Human protein_coding chr12:6640693 chr12:6640676 . . 0 4 hm5C_associated_SNPs_9699 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6640575-6640676
64251 chr12 6640677 6640677 1 + T A rs1127198 6640693 + 6640673 6640713 41 TTTTTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT TTTTAAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT < 41bp 1 0.474747136804655 1 0.600917339324951 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 UTR3 Human protein_coding chr12:6640693 chr12:6640677 . . 0 5 hm5C_associated_SNPs_9700 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:6640579-6640692
64251 chr12 6640694 6640694 1 + G A rs148024858 6640693 + 6640673 6640713 41 TTTTTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT TTTTTAAAAAAAAAAAAGGCCAGGCACTGTGGCTCACGCCT < 41bp 1 0.406752063505753 1 0.446364879608154 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 UTR3 Human protein_coding chr12:6640693 chr12:6640694 . . 0 22 hm5C_associated_SNPs_9701 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:6640665-6640699
64251 chr12 6640700 6640700 1 + T C rs556044417 6640693 + 6640673 6640713 41 TTTTTAAAAAAAAAAAAGGCCGGGCACTGTGGCTCACGCCT TTTTTAAAAAAAAAAAAGGCCGGGCACCGTGGCTCACGCCT < 41bp 1 0.47108787310895 1 0.515173196792603 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 UTR3 Human protein_coding chr12:6640693 chr12:6640700 . . 0 28 hm5C_associated_SNPs_9702 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr12:6640699-6640700
64251 chr12 6643703 6643703 1 + G A rs45568532 6643715 + 6643695 6643735 41 TCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAG TCCTGTTCAACAGTCAGCCGCATCTTCTTTTGCGTCGCCAG < 41bp 1 0.09703557965965 1 0.0631083250045776 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GAPDH ENSG00000111640 UTR5 Human protein_coding chr12:6643715 chr12:6643703 . . 0 9 hm5C_associated_SNPs_9711 0 0 38 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:6643660-6643740
64251 chr12 6643703 6643703 1 + G A rs45568532 6643718 + 6643698 6643738 41 TGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAGGTG TGTTCAACAGTCAGCCGCATCTTCTTTTGCGTCGCCAGGTG < 41bp 1 0.219575875124446 1 0.109505116939545 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000111640 UTR5 Human protein_coding chr12:6643718 chr12:6643703 . . 0 6 hm5C_associated_SNPs_9712 0 0 38 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:6643660-6643740
64251 chr12 6643713 6643713 1 + C T rs367946267 6643715 + 6643695 6643735 41 TCCTGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAG TCCTGTTCGACAGTCAGCTGCATCTTCTTTTGCGTCGCCAG < 41bp 1 0.10890058205923 1 0.0469537079334259 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GAPDH ENSG00000111640 UTR5 Human protein_coding chr12:6643715 chr12:6643713 . . 0 19 hm5C_associated_SNPs_9713 0 0 44 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:6643660-6643740
64251 chr12 6643713 6643713 1 + C T rs367946267 6643718 + 6643698 6643738 41 TGTTCGACAGTCAGCCGCATCTTCTTTTGCGTCGCCAGGTG TGTTCGACAGTCAGCTGCATCTTCTTTTGCGTCGCCAGGTG < 41bp 1 0.251241825679055 1 0.147297352552414 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000111640 UTR5 Human protein_coding chr12:6643718 chr12:6643713 . . 0 16 hm5C_associated_SNPs_9714 0 0 44 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:6643660-6643740
64251 chr12 6647393 6647393 1 + G A rs138263904 6647404 + 6647384 6647424 41 ACCCTCACTGCTGGGGAGTCCCTGCCACACTCAGTCCCCCA ACCCTCACTACTGGGGAGTCCCTGCCACACTCAGTCCCCCA < 41bp 1 0.212687114789555 1 0.0650769174098969 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647404 chr12:6647393 . . 0 10 hm5C_associated_SNPs_9715 0 0 2 IGF2BP2 POSTAR2 ENCODE chr12:6647375-6647393
64251 chr12 6647429 6647429 1 + A C rs561929037 6647439 + 6647419 6647459 41 CCCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGT CCCCCACCACCCTGAATCTCCCCTCCTCACAGTTGCCATGT < 41bp 1 0.129003168495939 1 0.04429030418396 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647439 chr12:6647429 . . 0 11 hm5C_associated_SNPs_9716 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6647420-6647440
64251 chr12 6647429 6647429 1 + A C rs561929037 6647440 + 6647420 6647460 41 CCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTA CCCCACCACCCTGAATCTCCCCTCCTCACAGTTGCCATGTA < 41bp 1 0.0940935189602911 1 0.107676178216934 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647440 chr12:6647429 . . 0 10 hm5C_associated_SNPs_9717 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6647420-6647440
64251 chr12 6647429 6647429 1 + A C rs561929037 6647441 + 6647421 6647461 41 CCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTAG CCCACCACCCTGAATCTCCCCTCCTCACAGTTGCCATGTAG < 41bp 1 0.389082821744426 1 0.198810935020447 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647441 chr12:6647429 . . 0 9 hm5C_associated_SNPs_9718 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6647420-6647440
64251 chr12 6647429 6647429 1 + A C rs561929037 6647448 + 6647428 6647468 41 CACTGAATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTT CCCTGAATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTT < 41bp 1 0.67169803677373 1 0.0602639615535736 experiment 0.65660392645254 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647448 chr12:6647429 . . 0 2 hm5C_associated_SNPs_9719 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6647420-6647440
64251 chr12 6647448 6647448 1 + C A rs141846451 6647439 + 6647419 6647459 41 CCCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGT CCCCCACCACACTGAATCTCCCCTCCTCAAAGTTGCCATGT < 41bp 1 0.127289219414528 1 0.0563882887363434 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647439 chr12:6647448 . . 0 30 hm5C_associated_SNPs_9720 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647440 + 6647420 6647460 41 CCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTA CCCCACCACACTGAATCTCCCCTCCTCAAAGTTGCCATGTA < 41bp 1 0.0924072169900614 1 0.0702826082706451 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647440 chr12:6647448 . . 0 29 hm5C_associated_SNPs_9721 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647441 + 6647421 6647461 41 CCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTAG CCCACCACACTGAATCTCCCCTCCTCAAAGTTGCCATGTAG < 41bp 1 0.383161131479058 1 0.173025637865067 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647441 chr12:6647448 . . 0 28 hm5C_associated_SNPs_9722 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647454 + 6647434 6647474 41 ATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTTGAAGAG ATCTCCCCTCCTCAAAGTTGCCATGTAGACCCCTTGAAGAG < 41bp 1 0.255050011091089 1 0.0488801300525665 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647454 chr12:6647448 . . 0 15 hm5C_associated_SNPs_9723 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647463 + 6647443 6647483 41 CCTCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGC CCTCAAAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGC < 41bp 1 0.606634654091093 1 0.114551186561584 experiment 0.786730691817814 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647463 chr12:6647448 . . 0 6 hm5C_associated_SNPs_9724 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647464 + 6647444 6647484 41 CTCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCC CTCAAAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCC < 41bp 1 0.219564450985268 1 0.13112485408783 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647464 chr12:6647448 . . 0 5 hm5C_associated_SNPs_9725 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647465 + 6647445 6647485 41 TCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCT TCAAAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCT < 41bp 1 0.178448355869507 1 0.0872215628623962 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647465 chr12:6647448 . . 0 4 hm5C_associated_SNPs_9726 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647448 6647448 1 + C A rs141846451 6647466 + 6647446 6647486 41 CACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCTA CAAAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCTA < 41bp 1 0.771550838378557 1 0.669820070266724 experiment 0.456898323242886 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647466 chr12:6647448 . . 0 3 hm5C_associated_SNPs_9727 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647439 + 6647419 6647459 41 CCCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGT CCCCCACCACACTGAATCTCCCCTCCTCACAGTTTCCATGT < 41bp 1 0.14535434817064 1 0.0560798048973083 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647439 chr12:6647453 . . 0 35 hm5C_associated_SNPs_9728 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647440 + 6647420 6647460 41 CCCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTA CCCCACCACACTGAATCTCCCCTCCTCACAGTTTCCATGTA < 41bp 1 0.0905828764921921 1 0.0926620960235596 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647440 chr12:6647453 . . 0 34 hm5C_associated_SNPs_9729 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647441 + 6647421 6647461 41 CCCACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTAG CCCACCACACTGAATCTCCCCTCCTCACAGTTTCCATGTAG < 41bp 1 0.407009392509919 1 0.234256714582443 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647441 chr12:6647453 . . 0 33 hm5C_associated_SNPs_9730 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647448 + 6647428 6647468 41 CACTGAATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTT CACTGAATCTCCCCTCCTCACAGTTTCCATGTAGACCCCTT < 41bp 1 0.568779894738132 1 0.0611736476421356 experiment 0.862440210523736 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647448 chr12:6647453 . . 0 26 hm5C_associated_SNPs_9731 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647454 + 6647434 6647474 41 ATCTCCCCTCCTCACAGTTGCCATGTAGACCCCTTGAAGAG ATCTCCCCTCCTCACAGTTTCCATGTAGACCCCTTGAAGAG < 41bp 1 0.30602204699199 1 0.131010264158249 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647454 chr12:6647453 . . 0 20 hm5C_associated_SNPs_9732 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647463 + 6647443 6647483 41 CCTCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGC CCTCACAGTTTCCATGTAGACCCCTTGAAGAGGGGAGGGGC < 41bp 1 0.553202462357509 1 0.101982951164246 experiment 0.893595075284981 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647463 chr12:6647453 . . 0 11 hm5C_associated_SNPs_9733 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647464 + 6647444 6647484 41 CTCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCC CTCACAGTTTCCATGTAGACCCCTTGAAGAGGGGAGGGGCC < 41bp 1 0.187674599274281 1 0.0821937024593353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647464 chr12:6647453 . . 0 10 hm5C_associated_SNPs_9734 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647465 + 6647445 6647485 41 TCACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCT TCACAGTTTCCATGTAGACCCCTTGAAGAGGGGAGGGGCCT < 41bp 1 0.153669507171669 1 0.0579120218753815 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647465 chr12:6647453 . . 0 9 hm5C_associated_SNPs_9735 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647453 6647453 1 + G T rs1803622 6647466 + 6647446 6647486 41 CACAGTTGCCATGTAGACCCCTTGAAGAGGGGAGGGGCCTA CACAGTTTCCATGTAGACCCCTTGAAGAGGGGAGGGGCCTA < 41bp 1 0.748245775468361 1 0.676541745662689 experiment 0.503508449063277 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647466 chr12:6647453 . . 0 8 hm5C_associated_SNPs_9736 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 6647516 6647516 1 + T G rs552128740 6647536 + 6647516 6647556 41 TAAAGTACCCTGTGCTCAACCAGTTACTTGTCCTGTCTTAT GAAAGTACCCTGTGCTCAACCAGTTACTTGTCCTGTCTTAT < 41bp 1 0.281043781397402 1 0.134436339139938 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647536 chr12:6647516 . . 0 1 hm5C_associated_SNPs_9737 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:6647420-6647520
64251 chr12 6969625 6969625 1 + G A rs79451772 6969628 + 6969608 6969648 41 CAGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACAT CAGCAGGATGCCCAGGAATTCTTCCTTCACCTTATCAACAT < 41bp 1 0.295524587005062 1 0.0689154863357544 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969628 chr12:6969625 synonymous SNV . 0 18 hm5C_associated_SNPs_9739 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:6969613-6969639
64251 chr12 6976688 6976688 1 + A G rs1800200 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGGCTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT < 41bp 1 0.482070242448973 1 0.0379800796508789 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976688 synonymous SNV . 0 7 hm5C_associated_SNPs_9740 1 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6976680-6976700
64251 chr12 6976714 6976714 1 + G C rs782758079 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACACTGACCTTCAGCCCCTCGGCT < 41bp 1 0.537459942280277 1 0.0607783198356628 experiment 0.925080115439445 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976714 nonsynonymous SNV 0.117 0 33 hm5C_associated_SNPs_9741 0 0 2 DDX3X POSTAR2 ENCODE chr12:6976699-6976744
64251 chr12 6978344 6978344 1 + T C rs141972556 6978340 + 6978320 6978360 41 AAGGCATGTCTTTGGGGAGTCAGATGAGGTTAGTAGCCAAG AAGGCATGTCTTTGGGGAGTCAGACGAGGTTAGTAGCCAAG < 41bp 1 0.332205598667371 1 0.538480579853058 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TPI1 ENSG00000111669 CDS Human protein_coding chr12:6978340 chr12:6978344 synonymous SNV . 0 25 hm5C_associated_SNPs_9742 1 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:6978342-6978361
64251 chr12 6979935 6979935 1 + C T rs540279409 6979919 + 6979899 6979939 41 TCAGAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCCGTGC TCAGAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCTGTGC < 41bp 1 0.154473098942695 1 0.0567590594291687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TPI1 ENSG00000111669 UTR3 Human protein_coding chr12:6979919 chr12:6979935 . . 0 37 hm5C_associated_SNPs_9743 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr12:6979924-6979976
64251 chr12 6979935 6979935 1 + C T rs540279409 6979922 + 6979902 6979942 41 GAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCCGTGCCTC GAAGGCAGGAGTGCTGCCCTCTCCCATGGTGCCTGTGCCTC < 41bp 1 0.586938580730958 1 0.849968194961548 experiment 0.826122838538084 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TPI1 ENSG00000111669 UTR3 Human protein_coding chr12:6979922 chr12:6979935 . . 0 34 hm5C_associated_SNPs_9744 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr12:6979924-6979976
64251 chr12 7023300 7023300 1 + A C rs710416 7023301 + 7023281 7023321 41 GGCGTGGGTGAGAGCCAAGACCGCGTGGGCCGCGGGGTGCT GGCGTGGGTGAGAGCCAAGCCCGCGTGGGCCGCGGGGTGCT < 41bp 1 0.726588752584775 1 0.716371178627014 experiment 0.546822494830451 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LRRC23 ENSG00000010626 UTR3 Human protein_coding chr12:7023301 chr12:7023300 . . 0 20 hm5C_associated_SNPs_9746 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:7023294-7023332
64251 chr12 7037504 7037504 1 + G A rs193192226 7037484 + 7037464 7037504 41 GGGGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCG GGGGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCA < 41bp 1 0.670696053569943 1 0.347865343093872 experiment 0.658607892860115 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATN1 ENSG00000111676 UTR5 Human protein_coding chr12:7037484 chr12:7037504 . . 0 41 hm5C_associated_SNPs_9747 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7037495-7037528
64251 chr12 7037504 7037504 1 + G A rs193192226 7037485 + 7037465 7037505 41 GGGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCGG GGGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCAG < 41bp 1 0.374531600295591 1 0.518835425376892 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATN1 ENSG00000111676 UTR5 Human protein_coding chr12:7037485 chr12:7037504 . . 0 40 hm5C_associated_SNPs_9748 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7037495-7037528
64251 chr12 7037504 7037504 1 + G A rs193192226 7037486 + 7037466 7037506 41 GGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCGGA GGAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCAGA < 41bp 1 0.713892798824422 1 0.811642289161682 experiment 0.572214402351157 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATN1 ENSG00000111676 UTR5 Human protein_coding chr12:7037486 chr12:7037504 . . 0 39 hm5C_associated_SNPs_9749 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7037495-7037528
64251 chr12 7037504 7037504 1 + G A rs193192226 7037487 + 7037467 7037507 41 GAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCGGAA GAGCTGCCGCCGCCGCCCCCCAGAGGCGCCGGAGCCCAGAA < 41bp 1 0.73249769783191 1 0.942912697792053 experiment 0.53500460433618 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATN1 ENSG00000111676 UTR5 Human protein_coding chr12:7037487 chr12:7037504 . . 0 38 hm5C_associated_SNPs_9750 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7037495-7037528
64251 chr12 7053198 7053198 1 + A G rs141260691 7053212 + 7053192 7053232 41 GCTCCCAGGGGCGTTGGGAACGGTTGTAGGACGTGGCTCTT GCTCCCGGGGGCGTTGGGAACGGTTGTAGGACGTGGCTCTT < 41bp 1 0.578449588536369 1 0.748106062412262 experiment 0.843100822927262 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control C12orf57 ENSG00000272173 ncRNA_exonic Human antisense chr12:7053212 chr12:7053198 . . 0 7 hm5C_associated_SNPs_9751 0 0 15 SSB POSTAR2 GSE95683,GSM2521599 chr12:7053174-7053199
64251 chr12 7080186 7080186 1 + G A rs782495453 7080174 + 7080154 7080194 41 ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAAC ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGACAGGAAAC < 41bp 1 0.197325979726094 1 0.0570454299449921 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080174 chr12:7080186 nonsynonymous SNV 0.904 0 33 hm5C_associated_SNPs_9752 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080186 7080186 1 + G A rs782495453 7080176 + 7080156 7080196 41 GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA GCTCTGCCACCCAAGCGGCCCCGACTAGGGACAGGAAACAA < 41bp 1 0.21258654314507 1 0.0555065870285034 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080176 chr12:7080186 nonsynonymous SNV 0.904 0 31 hm5C_associated_SNPs_9753 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080186 7080186 1 + G A rs782495453 7080177 + 7080157 7080197 41 CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG CTCTGCCACCCAAGCGGCCCCGACTAGGGACAGGAAACAAG < 41bp 1 0.364735286125283 1 0.0719850063323975 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080177 chr12:7080186 nonsynonymous SNV 0.904 0 30 hm5C_associated_SNPs_9754 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080187 7080187 1 + C G rs11064480 7080174 + 7080154 7080194 41 ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAAC ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGGAGGAAAC < 41bp 1 0.1830487406523 1 0.0509169101715088 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080174 chr12:7080187 nonsynonymous SNV 0.934 0 34 hm5C_associated_SNPs_9755 1 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080187 7080187 1 + C G rs11064480 7080176 + 7080156 7080196 41 GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA GCTCTGCCACCCAAGCGGCCCCGACTAGGGGGAGGAAACAA < 41bp 1 0.189456459967908 1 0.0607316792011261 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080176 chr12:7080187 nonsynonymous SNV 0.934 0 32 hm5C_associated_SNPs_9756 1 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080187 7080187 1 + C G rs11064480 7080177 + 7080157 7080197 41 CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG CTCTGCCACCCAAGCGGCCCCGACTAGGGGGAGGAAACAAG < 41bp 1 0.357877273587568 1 0.114770323038101 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080177 chr12:7080187 nonsynonymous SNV 0.934 0 31 hm5C_associated_SNPs_9757 1 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7342619 7342619 1 + G T rs117442311 7342623 + 7342603 7342643 41 CCCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGTTGTTGAA CCCTTCTTCGGGCAGTTTCGCCGTCCAGCCTGGTTGTTGAA < 41bp 1 0.0866713113051408 1 0.42214697599411 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX5 ENSG00000139197 UTR5 Human protein_coding chr12:7342623 chr12:7342619 . . 0 17 hm5C_associated_SNPs_9759 1 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:7342618-7342619
64251 chr12 7342619 7342619 1 + G T rs117442311 7342624 + 7342604 7342644 41 CCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGTTGTTGAAG CCTTCTTCGGGCAGTTTCGCCGTCCAGCCTGGTTGTTGAAG < 41bp 1 0.114130354326919 1 0.167798787355423 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX5 ENSG00000139197 UTR5 Human protein_coding chr12:7342624 chr12:7342619 . . 0 16 hm5C_associated_SNPs_9760 1 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:7342618-7342619
64251 chr12 7342636 7342636 1 + T A rs113752912 7342623 + 7342603 7342643 41 CCCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGTTGTTGAA CCCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGATGTTGAA < 41bp 1 0.0686280957484024 1 0.293141782283783 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX5 ENSG00000139197 UTR5 Human protein_coding chr12:7342623 chr12:7342636 . . 0 34 hm5C_associated_SNPs_9761 1 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr12:7342620-7342639
64251 chr12 7342636 7342636 1 + T A rs113752912 7342624 + 7342604 7342644 41 CCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGTTGTTGAAG CCTTCTTCGGGCAGTGTCGCCGTCCAGCCTGGATGTTGAAG < 41bp 1 0.120639191774718 1 0.119431734085083 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX5 ENSG00000139197 UTR5 Human protein_coding chr12:7342624 chr12:7342636 . . 0 33 hm5C_associated_SNPs_9762 1 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr12:7342620-7342639
64251 chr12 8234872 8234872 1 + C G rs115269413 8234880 + 8234860 8234900 41 CGGCAGCGCCGACAGCGGACCCAAGATGGCGACCGAGTTGG CGGCAGCGCCGAGAGCGGACCCAAGATGGCGACCGAGTTGG < 41bp 1 0.55437344228783 1 0.122934520244598 experiment 0.891253115424341 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NECAP1 ENSG00000089818 UTR5 Human protein_coding chr12:8234880 chr12:8234872 . . 0 13 hm5C_associated_SNPs_9763 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:8234871-8234872
64251 chr12 16053933 16053933 1 + A G rs74063293 16053943 + 16053923 16053963 41 CAGAGACAACAGAAGAGGAGCTAGGTAAATGCTATGGAATT CAGAGACAACGGAAGAGGAGCTAGGTAAATGCTATGGAATT < 41bp 1 0.481689718535292 1 0.447614103555679 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control STRAP ENSG00000023734 CDS Human protein_coding chr12:16053943 chr12:16053933 synonymous SNV . 0 11 hm5C_associated_SNPs_9766 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:16053912-16053955
64251 chr12 16517110 16517110 1 + T C rs4149206 16517098 + 16517078 16517118 41 AATTATGAACTGGGGTAAACCCATTTTGAATATTAGCATTG AATTATGAACTGGGGTAAACCCATTTTGAATACTAGCATTG < 41bp 1 0.0701005228764093 1 0.360411882400513 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGST1 ENSG00000008394 UTR3 Human protein_coding chr12:16517098 chr12:16517110 . . 0 33 hm5C_associated_SNPs_9767 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:16517052-16517163
64251 chr12 19427807 19427807 1 + G A rs142030429 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGACCCTTA < 41bp 1 0.395854720741162 1 0.40583348274231 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427807 synonymous SNV . 0 35 hm5C_associated_SNPs_9768 0 0 2 BUD13 POSTAR2 ENCODE chr12:19427768-19427916
64251 chr12 27788021 27788021 1 + G A rs2075378 27788020 + 27788000 27788040 41 CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA CCCAGATTCAACAGCAGAAACACTTGTTGAATGGCTTCAGA < 41bp 1 0.295184264277323 1 0.130691111087799 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27788020 chr12:27788021 synonymous SNV . 0 22 hm5C_associated_SNPs_9771 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27787892-27788054
64251 chr12 31236917 31236917 1 + G A rs146986956 31236904 + 31236884 31236924 41 GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCAAGGCCTG < 41bp 1 0.682259950034307 1 0.438158363103867 experiment 0.635480099931387 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31236904 chr12:31236917 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_9786 0 0 4 GRWD1 POSTAR2 ENCODE chr12:31236877-31236930
64251 chr12 32138437 32138437 1 + T G rs200406684 32138422 + 32138402 32138442 41 TCTAAAGAATCATTAAATGGCTTGACAAGCCATGGTAAAAA TCTAAAGAATCATTAAATGGCTTGACAAGCCATGGGAAAAA < 41bp 1 0.483232300595414 1 0.0808623731136322 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32138422 chr12:32138437 synonymous SNV . 0 36 hm5C_associated_SNPs_9788 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:32138420-32138440
64251 chr12 48357444 48357444 1 + G T rs370060356 48357442 + 48357422 48357462 41 TCCTCAAGCTGGCAGGTGGTCGGGGGAGCGGCCGGAGAGGA TCCTCAAGCTGGCAGGTGGTCGTGGGAGCGGCCGGAGAGGA < 41bp 1 0.792313648968264 1 0.538577854633331 experiment 0.415372702063472 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM106C ENSG00000134291 UTR5 Human protein_coding chr12:48357442 chr12:48357444 . . 0 23 hm5C_associated_SNPs_9790 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:48357431-48357460
64251 chr12 48358057 48358057 1 + C T rs34116679 48358052 + 48358032 48358072 41 CATTCCGCTGCTGCTCGCCCCTCCTCCTGCAGGCGAAAGCA CATTCCGCTGCTGCTCGCCCCTCCTTCTGCAGGCGAAAGCA < 41bp 1 0.537772445358061 1 0.74234926700592 experiment 0.924455109283878 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48358052 chr12:48358057 nonsynonymous SNV 0.001 0 26 hm5C_associated_SNPs_9791 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:48358000-48358060
64251 chr12 48362412 48362412 1 + G C rs6823 48362431 + 48362411 48362451 41 TGGCAGCAGAGAGGGACCATCCAAATACCTAAGAGAAAACA TCGCAGCAGAGAGGGACCATCCAAATACCTAAGAGAAAACA < 41bp 1 0.681567547111285 1 0.500009477138519 experiment 0.636864905777431 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM106C ENSG00000134291 UTR3 Human protein_coding chr12:48362431 chr12:48362412 . . 0 2 hm5C_associated_SNPs_9792 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:48362345-48362432
64251 chr12 49663409 49663409 1 + A C rs115048428 49663396 + 49663376 49663416 41 AGGAGATGATTCCTTCAACACCTTCTTCAGTGAAACGGGTG AGGAGATGATTCCTTCAACACCTTCTTCAGTGACACGGGTG < 41bp 1 0.0572182954477959 1 0.0372923612594604 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49663396 chr12:49663409 nonsynonymous SNV 0.854 2 34 hm5C_associated_SNPs_9793 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:49663362-49663449
64251 chr12 49888751 49888751 1 + C A rs200315994 49888749 + 49888729 49888769 41 ATGCCAGAGAATTGGAGGATCCCGAGTCTGCCATGCTAGAT ATGCCAGAGAATTGGAGGATCCAGAGTCTGCCATGCTAGAT < 41bp 1 0.614720401773003 1 0.657199025154114 experiment 0.770559196453994 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888749 chr12:49888751 synonymous SNV . 0 23 hm5C_associated_SNPs_9794 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:49888733-49888751
64251 chr12 50157054 50157054 1 + G A rs377472837 50157061 + 50157041 50157081 41 GGTAGAGCCACCCGGCCCTTCCTTCCTCATTGTTGTTTGGT GGTAGAGCCACCCAGCCCTTCCTTCCTCATTGTTGTTTGGT < 41bp 1 0.0179302701964694 1 0.140259265899658 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50157061 chr12:50157054 . . 0 14 hm5C_associated_SNPs_9795 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:50156828-50157072
64251 chr12 50157071 50157071 1 + T C rs7688 50157061 + 50157041 50157081 41 GGTAGAGCCACCCGGCCCTTCCTTCCTCATTGTTGTTTGGT GGTAGAGCCACCCGGCCCTTCCTTCCTCATCGTTGTTTGGT < 41bp 1 0.0296952555757128 1 0.095958411693573 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50157061 chr12:50157071 . . 0 31 hm5C_associated_SNPs_9796 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:50156828-50157072
64251 chr12 50157266 50157266 1 + C T rs138542934 50157275 + 50157255 50157295 41 ACACCTTTCTGCTTTGCCTTCACAAAAGTAATGTGTTCCCT ACACCTTTCTGTTTTGCCTTCACAAAAGTAATGTGTTCCCT < 41bp 1 0.687301768539809 1 0.360590815544128 experiment 0.625396462920383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50157275 chr12:50157266 . . 0 12 hm5C_associated_SNPs_9797 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:50157260-50157300
64251 chr12 50870145 50870145 1 + G A rs4491331 50870144 + 50870124 50870164 41 TATGGCCTTGTATTGCAAAGCGGATCAGTGGCTGGGGTGCC TATGGCCTTGTATTGCAAAGCAGATCAGTGGCTGGGGTGCC < 41bp 1 0.525368184222694 1 0.694510102272034 experiment 0.949263631554611 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARP4 ENSG00000161813 UTR3 Human protein_coding chr12:50870144 chr12:50870145 . . 0 22 hm5C_associated_SNPs_9799 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831622 chr12:50870134-50870155
64251 chr12 51117100 51117100 1 + T G rs536039018 51117087 + 51117067 51117107 41 CCTCACGGCCACGCTGCCCACTGTCCGAATGATTGTTGATG CCTCACGGCCACGCTGCCCACTGTCCGAATGATGGTTGATG < 41bp 1 0.10413878740563 1 0.0681718587875366 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51117087 chr12:51117100 nonsynonymous SNV 0.994 3 34 hm5C_associated_SNPs_9800 0 0 4 FXR2 POSTAR2 ENCODE chr12:51117035-51117102
64251 chr12 51632667 51632667 1 + G C rs542124123 51632676 + 51632656 51632696 41 TCCGCGACGCCGAGACAAACCGGACCCGCAACCACCATGAA TCCGCGACGCCCAGACAAACCGGACCCGCAACCACCATGAA < 41bp 1 0.617590710848938 1 0.490456163883209 experiment 0.764818578302124 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAZAP2 ENSG00000183283 UTR5 Human protein_coding chr12:51632676 chr12:51632667 . . 0 12 hm5C_associated_SNPs_9802 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:51632650-51632671
64251 chr12 51637365 51637365 1 + T G rs192230455 51637349 + 51637329 51637369 41 AATGTTTTGATTTTTGTTTTCTGAAATTGGATTTTATTTTA AATGTTTTGATTTTTGTTTTCTGAAATTGGATTTTAGTTTA < 41bp 1 0.480111925515365 1 0.798597574234009 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DAZAP2 ENSG00000183283 UTR3 Human protein_coding chr12:51637349 chr12:51637365 . . 0 37 hm5C_associated_SNPs_9803 0 0 53 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:51637337-51637370
64251 chr12 52635360 52635360 1 + G A rs999665 52635378 + 52635358 52635398 41 GCGCAGTATGAGGAGATGGCCAAATGCAGCCGGGCTGAGGC GCACAGTATGAGGAGATGGCCAAATGCAGCCGGGCTGAGGC < 41bp 1 0.373477342827096 1 0.524900376796722 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52635378 chr12:52635360 synonymous SNV . 0 3 hm5C_associated_SNPs_9815 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52635360-52635380
64251 chr12 52642517 52642517 1 + C T rs73109221 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGCATCTGCCAGTCGCAGGAGTGCCCGCGACTGA < 41bp 1 0.737895654095581 1 0.809707224369049 experiment 0.524208691808838 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642517 synonymous SNV . 0 14 hm5C_associated_SNPs_9819 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr12 52642518 52642518 1 + G A rs74761279 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGCATCCACCAGTCGCAGGAGTGCCCGCGACTGA < 41bp 1 0.74831373006732 1 0.898189425468445 experiment 0.50337253986536 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642518 nonsynonymous SNV 0.000 1 15 hm5C_associated_SNPs_9820 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr12 52642525 52642525 1 + G A rs111432010 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGCATCCGCCAGTCACAGGAGTGCCCGCGACTGA < 41bp 1 0.706579709685899 1 0.757065415382385 experiment 0.586840580628203 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642525 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_9821 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr12 52642538 52642538 1 + C A rs146555771 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGAGACTGA < 41bp 1 0.709739184525325 1 0.822860956192017 experiment 0.58052163094935 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642538 synonymous SNV . 0 35 hm5C_associated_SNPs_9822 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:52642520-52642540
64251 chr12 53342963 53342963 1 + C T rs141170056 53342950 + 53342930 53342970 41 TCCTGTCCTTTCTCTCTCCCCGGACAGCATGAGCTTCACCA TCCTGTCCTTTCTCTCTCCCCGGACAGCATGAGTTTCACCA < 41bp 1 0.168529597818746 1 0.320132225751877 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53342950 chr12:53342963 synonymous SNV . 0 34 hm5C_associated_SNPs_9823 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:53342905-53342973
64251 chr12 53342963 53342963 1 + C T rs141170056 53342977 + 53342957 53342997 41 CATGAGCTTCACCACTCGCTCCACCTTCTCCACCAACTACC CATGAGTTTCACCACTCGCTCCACCTTCTCCACCAACTACC < 41bp 1 0.128475279152756 1 0.108160674571991 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53342977 chr12:53342963 synonymous SNV . 0 7 hm5C_associated_SNPs_9824 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:53342905-53342973
64251 chr12 53342963 53342963 1 + C T rs141170056 53342978 + 53342958 53342998 41 ATGAGCTTCACCACTCGCTCCACCTTCTCCACCAACTACCG ATGAGTTTCACCACTCGCTCCACCTTCTCCACCAACTACCG < 41bp 1 0.242406221163394 1 0.0299873650074005 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53342978 chr12:53342963 synonymous SNV . 0 6 hm5C_associated_SNPs_9825 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:53342905-53342973
64251 chr12 53342963 53342963 1 + C T rs141170056 53342980 + 53342960 53343000 41 GAGCTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGT GAGTTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGT < 41bp 1 0.0182348888402191 1 0.0171572268009186 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53342980 chr12:53342963 synonymous SNV . 0 4 hm5C_associated_SNPs_9826 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:53342905-53342973
64251 chr12 53342963 53342963 1 + C T rs141170056 53342981 + 53342961 53343001 41 AGCTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGTC AGTTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGTC < 41bp 1 0.171874510752202 1 0.0812294185161591 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53342981 chr12:53342963 synonymous SNV . 0 3 hm5C_associated_SNPs_9827 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:53342905-53342973
64251 chr12 53412610 53412610 1 + C T rs185747457 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGATGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA < 41bp 1 0.327892162090649 1 0.0807921886444092 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412610 synonymous SNV . 0 7 hm5C_associated_SNPs_9828 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr12 53412610 53412610 1 + C T rs185747457 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGATGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC < 41bp 1 0.0498288947359465 1 0.0546877980232239 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412610 synonymous SNV . 0 5 hm5C_associated_SNPs_9829 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr12 53412646 53412646 1 + C A rs200433061 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATA < 41bp 1 0.0477030368376982 1 0.0349003672599792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412646 synonymous SNV . 0 41 hm5C_associated_SNPs_9830 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:53412616-53412655
64251 chr12 53427597 53427597 1 + C A rs115214256 53427592 + 53427572 53427612 41 AAGTTTCATTTAACTTAGGTCCCCCCCAAAGACCCAAACTG AAGTTTCATTTAACTTAGGTCCCCCACAAAGACCCAAACTG < 41bp 1 0.0503697329404807 1 0.0634445250034332 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53427592 chr12:53427597 synonymous SNV . 0 26 hm5C_associated_SNPs_9831 0 0 6 LIN28B POSTAR2 ENCODE chr12:53427589-53427622
64251 chr12 53428432 53428432 1 + G A rs369208771 53428436 + 53428416 53428456 41 AAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAG AAGAAACTCAGGAACGAGAACGGTCGAGGACAGGAAGTGAG < 41bp 1 0.27368727231328 1 0.507350444793701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53428436 chr12:53428432 synonymous SNV . 0 17 hm5C_associated_SNPs_9832 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:53428420-53428440
64251 chr12 53433486 53433486 1 + C T rs8916 53433478 + 53433458 53433498 41 CAAAGAAACCTGAGGAAAATCCAGCTTCCGTAAGTGTTGAA CAAAGAAACCTGAGGAAAATCCAGCTTCTGTAAGTGTTGAA < 41bp 1 0.278697294034122 1 0.22906705737114 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53433478 chr12:53433486 synonymous SNV . 0 29 hm5C_associated_SNPs_9834 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:53433478-53433499
64251 chr12 53434820 53434820 1 + A G rs192141649 53434829 + 53434809 53434849 41 TTCTGTGTCCTAGTTTTACCCTTTCTAAACACTGTCCTTTT TTCTGTGTCCTGGTTTTACCCTTTCTAAACACTGTCCTTTT < 41bp 1 0.0987513679876312 1 0.26406341791153 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF4B ENSG00000257337 ncRNA_intronic Human antisense chr12:53434829 chr12:53434820 . . 0 12 hm5C_associated_SNPs_9835 0 0 12 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:53434794-53434821
64251 chr12 53583667 53583667 1 + A G rs57787354 53583668 + 53583648 53583688 41 CCCTCTGTCCCTGCCACTTACAGCTAGTCTCTTTGGGATAG CCCTCTGTCCCTGCCACTTGCAGCTAGTCTCTTTGGGATAG < 41bp 1 0.488255222576752 1 0.360882550477982 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53583668 chr12:53583667 . . 0 20 hm5C_associated_SNPs_9836 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53583631-53583670
64251 chr12 53584012 53584012 1 + C T rs529869142 53584000 + 53583980 53584020 41 TGATTTGGCATCCAGAGGGCCCGGGAGCCCCACGGATACCC TGATTTGGCATCCAGAGGGCCCGGGAGCCCCATGGATACCC < 41bp 1 0.649218374769645 1 0.421426832675934 experiment 0.701563250460711 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584000 chr12:53584012 . . 0 33 hm5C_associated_SNPs_9837 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53583989-53584036
64251 chr12 53584076 53584076 1 + C T rs143415157 53584056 + 53584036 53584076 41 CTCACACCGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCC CTCACACCGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCT < 41bp 1 0.68349441012618 1 0.361695110797882 experiment 0.633011179747641 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584056 chr12:53584076 . . 0 41 hm5C_associated_SNPs_9838 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53584076 53584076 1 + C T rs143415157 53584062 + 53584042 53584082 41 CCGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTG CCGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCTCTGCTG < 41bp 1 0.700736965045716 1 0.0857657790184021 experiment 0.598526069908569 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584062 chr12:53584076 . . 0 35 hm5C_associated_SNPs_9839 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53584076 53584076 1 + C T rs143415157 53584063 + 53584043 53584083 41 CGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGG CGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCTCTGCTGG < 41bp 1 0.40326990299751 1 0.185598105192184 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584063 chr12:53584076 . . 0 34 hm5C_associated_SNPs_9840 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53584076 53584076 1 + C T rs143415157 53584064 + 53584044 53584084 41 GCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGGC GCTGCAGAGGCTCCTGGGCCCAATGCCCGACCTCTGCTGGC < 41bp 1 0.666740181665757 1 0.125341892242432 experiment 0.666519636668486 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584064 chr12:53584076 . . 0 33 hm5C_associated_SNPs_9841 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53584083 53584083 1 + G A rs139349151 53584063 + 53584043 53584083 41 CGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGG CGCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGA < 41bp 1 0.441829459610366 1 0.352320820093155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584063 chr12:53584083 . . 0 41 hm5C_associated_SNPs_9842 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53584083 53584083 1 + G A rs139349151 53584064 + 53584044 53584084 41 GCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGGC GCTGCAGAGGCTCCTGGGCCCAATGCCCGACCCCTGCTGAC < 41bp 1 0.672743887971782 1 0.105388849973679 experiment 0.654512224056436 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584064 chr12:53584083 . . 0 40 hm5C_associated_SNPs_9843 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53584048-53584083
64251 chr12 53690217 53690217 1 + G A rs113187830 53690215 + 53690195 53690235 41 TTTTTCTTTCTTTTTTGAGACGGAATTTCGCTCTGTCGCCC TTTTTCTTTCTTTTTTGAGACGAAATTTCGCTCTGTCGCCC < 41bp 1 0.50880426178624 1 0.394164144992828 experiment 0.982391476427519 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFDN5 ENSG00000123349 CDS Human protein_coding chr12:53690215 chr12:53690217 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_9844 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:53690200-53690220
64251 chr12 53700848 53700848 1 + C T rs1534282 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCATTGGCGGTCACCACACCCGAGAGGGTGCCTTG < 41bp 1 0.555101354501865 1 0.280366361141205 experiment 0.88979729099627 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700848 nonsynonymous SNV 0.995 0 10 hm5C_associated_SNPs_9845 0 0 1 TBRG4 POSTAR2 ENCODE chr12:53700834-53700865
64251 chr12 53700852 53700852 1 + C T rs371647277 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCACTGGTGGTCACCACACCCGAGAGGGTGCCTTG < 41bp 1 0.553596372203663 1 0.36497962474823 experiment 0.892807255592674 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700852 synonymous SNV . 0 14 hm5C_associated_SNPs_9846 0 0 1 TBRG4 POSTAR2 ENCODE chr12:53700834-53700865
64251 chr12 53700853 53700853 1 + G A rs142953883 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCACTGGCAGTCACCACACCCGAGAGGGTGCCTTG < 41bp 1 0.555772438022739 1 0.369680672883987 experiment 0.888455123954522 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700853 nonsynonymous SNV 0.984 4 15 hm5C_associated_SNPs_9847 0 0 1 TBRG4 POSTAR2 ENCODE chr12:53700834-53700865
64251 chr12 53700860 53700860 1 + A G rs711316 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCACTGGCGGTCACCGCACCCGAGAGGGTGCCTTG < 41bp 1 0.615527366824096 1 0.508378148078918 experiment 0.768945266351808 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700860 nonsynonymous SNV 0.954 0 22 hm5C_associated_SNPs_9848 0 0 1 TBRG4 POSTAR2 ENCODE chr12:53700834-53700865
64251 chr12 53854790 53854790 1 + A G rs557980143 53854793 + 53854773 53854813 41 ATTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAG ATTTTGAATTTCTTTTTGCTCCAAAGAGTACAGGGGCTCAG < 41bp 1 0.302221748504282 1 0.257339000701904 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCBP2 ENSG00000257379 ncRNA_intronic Human processed_transcript chr12:53854793 chr12:53854790 . . 0 18 hm5C_associated_SNPs_9849 0 0 6 U2AF2 POSTAR2 GSE61603,GSM1509288 chr12:53854774-53854795
64251 chr12 53854790 53854790 1 + A G rs557980143 53854794 + 53854774 53854814 41 TTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAGG TTTTGAATTTCTTTTTGCTCCAAAGAGTACAGGGGCTCAGG < 41bp 1 0.201492253775746 1 0.395569354295731 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCBP2 ENSG00000257379 ncRNA_intronic Human processed_transcript chr12:53854794 chr12:53854790 . . 0 17 hm5C_associated_SNPs_9850 0 0 6 U2AF2 POSTAR2 GSE61603,GSM1509288 chr12:53854774-53854795
64251 chr12 54678342 54678342 1 + C A rs537037310 54678327 + 54678307 54678347 41 CAACTTTATTCCATATTGTTCAACAGGAAACAAAGCTTAGC CAACTTTATTCCATATTGTTCAACAGGAAACAAAGATTAGC < 41bp 1 0.252524421838109 1 0.138254970312119 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HNRNPA1P10 ENSG00000258344 ncRNA_intronic Human sense_overlapping chr12:54678327 chr12:54678342 . . 0 36 hm5C_associated_SNPs_9853 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:54678318-54678361
64251 chr12 56075840 56075840 1 + C T rs74421938 56075823 + 56075803 56075843 41 CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATCCCCA CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATCTCCA < 41bp 1 0.411059454722845 1 0.0605827867984772 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075823 chr12:56075840 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_9856 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr12:56075825-56075848
64251 chr12 56365699 56365699 1 + C A rs2069414 56365708 + 56365688 56365728 41 TTTAAAAAAGCCTTCCTACACGTTAGATTTGCCGTACCAAT TTTAAAAAAGCATTCCTACACGTTAGATTTGCCGTACCAAT < 41bp 1 0.282255892059952 1 0.071856826543808 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDK2 ENSG00000123374 UTR3 Human protein_coding chr12:56365708 chr12:56365699 . . 0 12 hm5C_associated_SNPs_9858 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:56365680-56365700
64251 chr12 56388307 56388307 1 + C T rs187146028 56388294 + 56388274 56388314 41 GGCTTGGGGATCTTAGTTTTCTTTTGTTTATTTCCCAGCTC GGCTTGGGGATCTTAGTTTTCTTTTGTTTATTTTCCAGCTC < 41bp 1 0.186449971822174 1 0.0909078121185303 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56388294 chr12:56388307 . . 0 34 hm5C_associated_SNPs_9859 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:56388256-56388396
64251 chr12 56388307 56388307 1 + C T rs187146028 56388308 + 56388288 56388328 41 AGTTTTCTTTTGTTTATTTCCCAGCTCATTTTTTTCTTCTG AGTTTTCTTTTGTTTATTTTCCAGCTCATTTTTTTCTTCTG < 41bp 1 0.219264713135991 1 0.805207490921021 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56388308 chr12:56388307 . . 0 20 hm5C_associated_SNPs_9860 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:56388256-56388396
64251 chr12 56388307 56388307 1 + C T rs187146028 56388309 + 56388289 56388329 41 GTTTTCTTTTGTTTATTTCCCAGCTCATTTTTTTCTTCTGG GTTTTCTTTTGTTTATTTTCCAGCTCATTTTTTTCTTCTGG < 41bp 1 0.29509435192769 1 0.742076694965363 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56388309 chr12:56388307 . . 0 19 hm5C_associated_SNPs_9861 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:56388256-56388396
64251 chr12 56435858 56435858 1 + C T rs555702040 56435855 + 56435835 56435875 41 TTGCCGTTCTTGAAGCCCGTCTCCTAAGGATTCTCCCGGTG TTGCCGTTCTTGAAGCCCGTCTCTTAAGGATTCTCCCGGTG < 41bp 1 0.132818429409767 1 0.0337993800640106 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS26 ENSG00000197728 UTR5 Human protein_coding chr12:56435855 chr12:56435858 . . 0 24 hm5C_associated_SNPs_9862 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:56435822-56435860
64251 chr12 56506779 56506779 1 + G A rs530012784 56506794 + 56506774 56506814 41 AGAGCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAAC AGAGCAGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAAC < 41bp 1 0.376692937685406 1 0.21268817782402 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506794 chr12:56506779 . . 0 6 hm5C_associated_SNPs_9863 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56506740-56506783
64251 chr12 56506779 56506779 1 + G A rs530012784 56506795 + 56506775 56506815 41 GAGCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACC GAGCAGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACC < 41bp 1 0.771967247437159 1 0.550030291080475 experiment 0.456065505125682 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506795 chr12:56506779 . . 0 5 hm5C_associated_SNPs_9864 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56506740-56506783
64251 chr12 56506779 56506779 1 + G A rs530012784 56506796 + 56506776 56506816 41 AGCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCC AGCAGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCC < 41bp 1 0.330230257787018 1 0.135750710964203 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506796 chr12:56506779 . . 0 4 hm5C_associated_SNPs_9865 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56506740-56506783
64251 chr12 56506779 56506779 1 + G A rs530012784 56506797 + 56506777 56506817 41 GCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCA GCAGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCA < 41bp 1 0.234257877005577 1 0.0977607667446136 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506797 chr12:56506779 . . 0 3 hm5C_associated_SNPs_9866 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56506740-56506783
64251 chr12 56506779 56506779 1 + G A rs530012784 56506798 + 56506778 56506818 41 CGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCAC CAGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCAC < 41bp 1 0.501553421577619 1 0.106489509344101 experiment 0.996893156844761 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506798 chr12:56506779 . . 0 2 hm5C_associated_SNPs_9867 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56506740-56506783
64251 chr12 56506803 56506803 1 + C G rs548528381 56506794 + 56506774 56506814 41 AGAGCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAAC AGAGCGGGGGGATCTCCCTGCCCCCACCCGAGTTCCCCAAC < 41bp 1 0.3817906950585 1 0.145054191350937 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506794 chr12:56506803 . . 0 30 hm5C_associated_SNPs_9868 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56506773-56506805
64251 chr12 56506803 56506803 1 + C G rs548528381 56506796 + 56506776 56506816 41 AGCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCC AGCGGGGGGATCTCCCTGCCCCCACCCGAGTTCCCCAACCC < 41bp 1 0.348961247227026 1 0.15949684381485 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506796 chr12:56506803 . . 0 28 hm5C_associated_SNPs_9869 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56506773-56506805
64251 chr12 56506803 56506803 1 + C G rs548528381 56506797 + 56506777 56506817 41 GCGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCA GCGGGGGGATCTCCCTGCCCCCACCCGAGTTCCCCAACCCA < 41bp 1 0.261632886851725 1 0.0853477418422699 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506797 chr12:56506803 . . 0 27 hm5C_associated_SNPs_9870 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56506773-56506805
64251 chr12 56506803 56506803 1 + C G rs548528381 56506798 + 56506778 56506818 41 CGGGGGGATCTCCCTGCCCCCACCCCAGTTCCCCAACCCAC CGGGGGGATCTCCCTGCCCCCACCCGAGTTCCCCAACCCAC < 41bp 1 0.645765628937381 1 0.128514230251312 experiment 0.708468742125239 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PA2G4 ENSG00000257553 ncRNA_intronic Human antisense chr12:56506798 chr12:56506803 . . 0 26 hm5C_associated_SNPs_9871 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56506773-56506805
64251 chr12 56510500 56510500 1 + C A rs376739018 56510516 + 56510496 56510536 41 CTGACCTCGGCACTTAGCATCATCACAGCAAACTAACTGTA CTGAACTCGGCACTTAGCATCATCACAGCAAACTAACTGTA < 41bp 1 0.354518831110484 1 0.0819647908210754 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL41 ENSG00000229117 UTR5 Human protein_coding chr12:56510516 chr12:56510500 . . 0 5 hm5C_associated_SNPs_9872 0 0 52 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:56510420-56510560
64251 chr12 56527596 56527596 1 + G A rs112882931 56527593 + 56527573 56527613 41 GTGGAATTGGGGAGTCTCCTCTCGACCAGATCCCCCGTCAG GTGGAATTGGGGAGTCTCCTCTCAACCAGATCCCCCGTCAG < 41bp 1 0.794120199110845 1 0.876954555511475 experiment 0.411759601778309 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56527593 chr12:56527596 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_9875 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:56527596-56527636
64251 chr12 56532009 56532009 1 + C A rs35075600 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG GAGGATGTCCCATCTGGCCGCCTGCACTTGAGCCTGGAGCG < 41bp 1 0.0563052461410771 1 0.483076691627502 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56532009 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_9876 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:56532000-56532020
64251 chr12 56532009 56532009 1 + C A rs35075600 56532000 + 56531980 56532020 41 AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGT AGGATGTCCCATCTGGCCGCCTGCACTTGAGCCTGGAGCGT < 41bp 1 0.534913622734176 1 0.511815190315247 experiment 0.930172754531648 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532000 chr12:56532009 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_9877 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:56532000-56532020
64251 chr12 56554111 56554111 1 + G A rs75503023 56554126 + 56554106 56554146 41 TAAGAGGTGAACTGCGCTTTCTCAGAGAAAGCAGCCATATG TAAGAAGTGAACTGCGCTTTCTCAGAGAAAGCAGCCATATG < 41bp 1 0.59714729288718 1 0.126215815544128 experiment 0.80570541422564 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYL6 ENSG00000092841 CDS Human protein_coding chr12:56554126 chr12:56554111 nonsynonymous SNV 0.854 1 6 hm5C_associated_SNPs_9878 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr12:56554103-56554131
64251 chr12 56664224 56664224 1 + C A rs538924843 56664231 + 56664211 56664251 41 CTGTTTCTCCTCTCAATTTCCCAGAAATTGGGTTCTATGCT CTGTTTCTCCTCTAAATTTCCCAGAAATTGGGTTCTATGCT < 41bp 1 0.382638647714841 1 0.572826385498047 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ10A ENSG00000135469 UTR3 Human protein_coding chr12:56664231 chr12:56664224 . . 0 14 hm5C_associated_SNPs_9884 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:56664201-56664233
64251 chr12 56862381 56862381 1 + G A rs148180043 56862382 + 56862362 56862402 41 ATCCAAGGCGCAAGATGGCGCTGCTTTTTGCACGTTCTTTG ATCCAAGGCGCAAGATGGCACTGCTTTTTGCACGTTCTTTG < 41bp 1 0.565978888691708 1 0.0600553750991821 experiment 0.868042222616585 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56862382 chr12:56862381 synonymous SNV . 0 20 hm5C_associated_SNPs_9885 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr12:56862375-56862403
64251 chr12 57167939 57167939 1 + G A rs141210914 57167934 + 57167914 57167954 41 CTACTCAGTGGGTGAAGGAGCATGTGGGGGACAGAGGTATG CTACTCAGTGGGTGAAGGAGCATGTAGGGGACAGAGGTATG < 41bp 1 0.425882962098266 1 0.266766548156738 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57167934 chr12:57167939 synonymous SNV . 0 26 hm5C_associated_SNPs_9886 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:57167919-57167947
64251 chr12 57548466 57548466 1 + C T rs1800137 57548481 + 57548461 57548501 41 CAGACCATCATCCAGGGCATCCTGGTGAGGGAGCTACTGTC CAGACTATCATCCAGGGCATCCTGGTGAGGGAGCTACTGTC < 41bp 1 0.0734835564532244 1 0.127378731966019 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57548481 chr12:57548466 synonymous SNV . 0 6 hm5C_associated_SNPs_9887 0 0 4 EIF3H POSTAR2 ENCODE chr12:57548443-57548479
64251 chr12 57560825 57560825 1 + G A rs78054559 57560805 + 57560785 57560825 41 TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTCG TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTCA < 41bp 1 0.0516741604073532 1 0.283891916275024 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57560805 chr12:57560825 synonymous SNV . 0 41 hm5C_associated_SNPs_9888 0 0 1 RPS3 POSTAR2 ENCODE chr12:57560800-57560825
64251 chr12 57571249 57571249 1 + C T rs2228187 57571257 + 57571237 57571277 41 CAGCCTGCCCCGCATTGAGGCAGCCTCCATGAGTGGGGCTG CAGCCTGCCCCGTATTGAGGCAGCCTCCATGAGTGGGGCTG < 41bp 1 0.119876417912573 1 0.411263763904572 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57571257 chr12:57571249 synonymous SNV . 0 13 hm5C_associated_SNPs_9889 0 0 6 NOL12 POSTAR2 ENCODE chr12:57571219-57571303
64251 chr12 57588469 57588469 1 + C T rs182309785 57588474 + 57588454 57588494 41 TGAACATGGCGAGGACGAGACCCACTGCAGTGAGTGACCAC TGAACATGGCGAGGATGAGACCCACTGCAGTGAGTGACCAC < 41bp 1 0.0385292183671054 1 0.0379864275455475 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57588474 chr12:57588469 synonymous SNV . 0 16 hm5C_associated_SNPs_9890 0 0 2 PPIG POSTAR2 ENCODE chr12:57588456-57588482
64251 chr12 57597282 57597282 1 + C T rs2228192 57597276 + 57597256 57597296 41 GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGG GACGCCGACTGCATGGACGGCAGCGATGAGGAGGCCTGCGG < 41bp 1 0.261580763882412 1 0.21911346912384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57597276 chr12:57597282 synonymous SNV . 0 27 hm5C_associated_SNPs_9891 0 0 3 GRWD1 POSTAR2 ENCODE chr12:57597232-57597282
64251 chr12 57619362 57619362 1 + G A rs10783816 57619359 + 57619339 57619379 41 CACCGACCGTGCCTGTACGACCCGTCGCAGGTGTGCTTCAC CACCGACCGTGCCTGTACGACCCATCGCAGGTGTGCTTCAC < 41bp 1 0.133557272457454 1 0.153905034065247 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619359 chr12:57619362 synonymous SNV . 0 24 hm5C_associated_SNPs_9897 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:57619362-57619363
64251 chr12 57619362 57619362 1 + G A rs10783816 57619360 + 57619340 57619380 41 ACCGACCGTGCCTGTACGACCCGTCGCAGGTGTGCTTCACC ACCGACCGTGCCTGTACGACCCATCGCAGGTGTGCTTCACC < 41bp 1 0.0577655926169359 1 0.201883584260941 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619360 chr12:57619362 synonymous SNV . 0 23 hm5C_associated_SNPs_9898 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:57619362-57619363
64251 chr12 57619362 57619362 1 + G A rs10783816 57619361 + 57619341 57619381 41 CCGACCGTGCCTGTACGACCCGTCGCAGGTGTGCTTCACCG CCGACCGTGCCTGTACGACCCATCGCAGGTGTGCTTCACCG < 41bp 1 0.366563791455457 1 0.100317865610123 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619361 chr12:57619362 synonymous SNV . 0 22 hm5C_associated_SNPs_9899 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:57619362-57619363
64251 chr12 57626954 57626954 1 + C T rs371621472 57626956 + 57626936 57626976 41 GACTCTGACCATCCACCTCTCACACAGGTCAGGGCTCATCT GACTCTGACCATCCACCTTTCACACAGGTCAGGGCTCATCT < 41bp 1 0.125347106421609 1 0.0630306899547577 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SHMT2 ENSG00000182199 intronic Human protein_coding chr12:57626956 chr12:57626954 . . 0 19 hm5C_associated_SNPs_9900 0 0 5 SF3A3 POSTAR2 ENCODE chr12:57626922-57626988
64251 chr12 57627860 57627860 1 + G A rs202118297 57627865 + 57627845 57627885 41 TTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAG TTTATAGATGAAGGGATCAACATTGGCTTAGAGGTGAAGAG < 41bp 1 0.245839057723613 1 0.0968706607818604 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627865 chr12:57627860 nonsynonymous SNV 0.992 1 16 hm5C_associated_SNPs_9901 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57627798-57627891
64251 chr12 57911160 57911160 1 - G A rs697221 57911153 - 57911133 57911173 41 TGCCTTTCTCCTTCGGGACACTGTCCAGCTGGGAGCTGGAA TGCCTTTCTCCTTTGGGACACTGTCCAGCTGGGAGCTGGAA < 41bp 1 0.221038544330934 1 0.0971768498420715 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911153 chr12:57911160 synonymous SNV 0.981 0 14 hm5C_associated_SNPs_9902 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:57911145-57911171
64251 chr12 57919829 57919829 1 + C G rs77189304 57919809 + 57919789 57919829 41 CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTC CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTG < 41bp 1 0.0842029111671715 1 0.12808632850647 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919809 chr12:57919829 nonsynonymous SNV 0.971 0 41 hm5C_associated_SNPs_9903 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919829 57919829 1 + C G rs77189304 57919812 + 57919792 57919832 41 TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTC TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTGGTC < 41bp 1 0.0672826755523939 1 0.0543093383312225 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919812 chr12:57919829 nonsynonymous SNV 0.971 0 38 hm5C_associated_SNPs_9904 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919829 57919829 1 + C G rs77189304 57919813 + 57919793 57919833 41 GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCC GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTGGTCC < 41bp 1 0.0835612589546087 1 0.0736740231513977 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919813 chr12:57919829 nonsynonymous SNV 0.971 0 37 hm5C_associated_SNPs_9905 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919829 57919829 1 + C G rs77189304 57919814 + 57919794 57919834 41 CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCC CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTGGTCCC < 41bp 1 0.152221020730819 1 0.0647962093353271 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919814 chr12:57919829 nonsynonymous SNV 0.971 0 36 hm5C_associated_SNPs_9906 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919829 57919829 1 + C G rs77189304 57919816 + 57919796 57919836 41 CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCCTC CAGGCACCCTCAGCTTCCCACTCCTCATCACTTGGTCCCTC < 41bp 1 0.29832063317299 1 0.399101972579956 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919816 chr12:57919829 nonsynonymous SNV 0.971 0 34 hm5C_associated_SNPs_9907 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57922962 57922962 1 + C G rs200717548 57922978 + 57922958 57922998 41 CCTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG CCTCGCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG < 41bp 1 0.0791054984128211 1 0.177037507295609 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922978 chr12:57922962 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_9908 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:57922946-57922980
64251 chr12 58109707 58109707 1 + T G rs73125477 58109718 + 58109698 58109738 41 CTGTCACCCTTCCCTACAGCCTGAGGAGTACATGGCCTACG CTGTCACCCGTCCCTACAGCCTGAGGAGTACATGGCCTACG < 41bp 1 0.730833545243041 1 0.486068278551102 experiment 0.538332909513919 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109718 chr12:58109707 synonymous SNV . 0 10 hm5C_associated_SNPs_9909 0 0 6 METAP2 POSTAR2 ENCODE chr12:58109578-58109756
64251 chr12 58190184 58190184 1 + C A rs62000432 58190183 + 58190163 58190203 41 CATGTGGTGGGCATGGCCCCCCTCTCTGTTGGCTCCCTGGA CATGTGGTGGGCATGGCCCCCATCTCTGTTGGCTCCCTGGA < 41bp 1 0.476634957056393 1 0.340185761451721 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TSFM ENSG00000123297 CDS Human protein_coding chr12:58190183 chr12:58190184 nonsynonymous SNV 0.981 0 22 hm5C_associated_SNPs_9911 2 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:58190164-58190191
64251 chr12 62784650 62784650 1 + T C rs75305174 62784645 + 62784625 62784665 41 ATTTTTGATTTTACTTAAGCCGATATGTCAAAATATCTACT ATTTTTGATTTTACTTAAGCCGATACGTCAAAATATCTACT < 41bp 1 0.121143205995221 1 0.0360323786735535 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP15 ENSG00000135655 CDS Human protein_coding chr12:62784645 chr12:62784650 synonymous SNV . 0 26 hm5C_associated_SNPs_9913 0 0 3 DDX24 POSTAR2 ENCODE chr12:62784641-62784761
64251 chr12 62798155 62798155 1 + A G rs138462391 62798172 + 62798152 62798192 41 CTAATGAAAGTCCTAGAAGCCATAAAAGAGACACTTTCCTG CTAGTGAAAGTCCTAGAAGCCATAAAAGAGACACTTTCCTG < 41bp 1 0.310091794946896 1 0.274403154850006 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP15 ENSG00000135655 CDS Human protein_coding chr12:62798172 chr12:62798155 synonymous SNV . 0 4 hm5C_associated_SNPs_9914 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:62798112-62798160
64251 chr12 62931441 62931441 1 + G A rs79202632 62931443 + 62931423 62931463 41 CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC CTTGGCGCATTGCCATGGAGCTGTTCTTGGAACATCATGGC < 41bp 1 0.179007884611098 1 0.045130580663681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62931443 chr12:62931441 synonymous SNV . 0 19 hm5C_associated_SNPs_9915 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:62931421-62931445
64251 chr12 62938748 62938748 1 + G T rs140799300 62938730 + 62938710 62938750 41 ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGAT ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGTAT < 41bp 1 0.179687585533014 1 0.186669111251831 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62938730 chr12:62938748 nonsynonymous SNV 0.994 2 39 hm5C_associated_SNPs_9916 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067861 chr12:62938740-62938760
64251 chr12 62954482 62954482 1 + G A rs184173771 62954463 + 62954443 62954483 41 TGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGC TGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGAC < 41bp 1 0.0840609674619491 1 0.139079302549362 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62954463 chr12:62954482 synonymous SNV . 0 40 hm5C_associated_SNPs_9919 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:62954469-62954577
64251 chr12 66218904 66218904 1 + G C rs370658363 66218893 + 66218873 66218913 41 GGTGTTGATGGTGGCAGCGGCGGCAGCCTAAGCAACAGCAG GGTGTTGATGGTGGCAGCGGCGGCAGCCTAACCAACAGCAG < 41bp 1 0.743700371044567 1 0.577804684638977 experiment 0.512599257910866 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPSAP52 ENSG00000241749 ncRNA_intronic Human transcribed_processed_pseudogene chr12:66218893 chr12:66218904 . . 0 32 hm5C_associated_SNPs_9927 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:66218860-66218920
64251 chr12 69082805 69082805 1 + G A rs2259588 69082818 + 69082798 69082838 41 CTGCACGGAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC CTGCACGAAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC < 41bp 1 0.716881843225928 1 0.705155551433563 experiment 0.566236313548143 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69082818 chr12:69082805 synonymous SNV . 0 8 hm5C_associated_SNPs_9928 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:69082772-69082805
64251 chr12 69633393 69633393 1 + C A rs367612178 69633378 + 69633358 69633398 41 GCTGCTGCTGCCGCGGCGGGCAGACCTGCAGGAGGCGGCGG GCTGCTGCTGCCGCGGCGGGCAGACCTGCAGGAGGAGGCGG < 41bp 1 0.772854739818054 1 0.767518758773804 experiment 0.454290520363891 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPSF6 ENSG00000111605 UTR5 Human protein_coding chr12:69633378 chr12:69633393 . . 0 36 hm5C_associated_SNPs_9929 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:69633380-69633400
64251 chr12 69633393 69633393 1 + C A rs367612178 69633411 + 69633391 69633431 41 GGCGGCGGCGGCGGCGGCGGCCGAGGCTGAAGGAAGATGGC GGAGGCGGCGGCGGCGGCGGCCGAGGCTGAAGGAAGATGGC < 41bp 1 0.733926785924397 1 0.861478388309479 experiment 0.532146428151206 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CPSF6 ENSG00000111605 UTR5 Human protein_coding chr12:69633411 chr12:69633393 . . 0 3 hm5C_associated_SNPs_9930 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:69633380-69633400
64251 chr12 69633416 69633416 1 + G A rs200448686 69633411 + 69633391 69633431 41 GGCGGCGGCGGCGGCGGCGGCCGAGGCTGAAGGAAGATGGC GGCGGCGGCGGCGGCGGCGGCCGAGACTGAAGGAAGATGGC < 41bp 1 0.694005333769332 1 0.847369015216827 experiment 0.611989332461335 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CPSF6 ENSG00000111605 UTR5 Human protein_coding chr12:69633411 chr12:69633416 . . 0 26 hm5C_associated_SNPs_9931 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:69633380-69633420
64251 chr12 70133399 70133399 1 + C A rs143387389 70133412 + 70133392 70133432 41 GTGAAACCTGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCG GTGAAACATGGTGGGAAATTCCGGGCAGGCGCCCGGAGTCG < 41bp 1 0.674831280995051 1 0.786156594753265 experiment 0.650337438009898 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAB3IP ENSG00000127328 UTR5 Human protein_coding chr12:70133412 chr12:70133399 . . 0 8 hm5C_associated_SNPs_9932 0 0 1 TBRG4 POSTAR2 ENCODE chr12:70133399-70133408
64251 chr12 70133433 70133433 1 + C T rs74101316 70133424 + 70133404 70133444 41 GGGAAATTCCGGGCAGGCGCCCGGAGTCGCGCCCAAGTAGG GGGAAATTCCGGGCAGGCGCCCGGAGTCGTGCCCAAGTAGG < 41bp 1 0.585095307835641 1 0.768917560577393 experiment 0.829809384328717 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAB3IP ENSG00000127328 UTR5 Human protein_coding chr12:70133424 chr12:70133433 . . 0 30 hm5C_associated_SNPs_9933 0 0 1 TBRG4 POSTAR2 ENCODE chr12:70133408-70133439
64251 chr12 70747924 70747924 1 + G T rs374594056 70747908 + 70747888 70747928 41 TAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGGTCTG TAAATTTGTAATTTGTTTTTCTCTAGTTTGAGCAGGTTCTG < 41bp 1 0.40786686821349 1 0.539438366889954 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CNOT2 ENSG00000111596 UTR3 Human protein_coding chr12:70747908 chr12:70747924 . . 0 37 hm5C_associated_SNPs_9934 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:70747893-70747965
64251 chr12 72096321 72096321 1 + C T rs146291637 72096315 + 72096295 72096335 41 CACGTTGGCTAGGCTGGTCTCGAACTCCTGACCTCAAGTGA CACGTTGGCTAGGCTGGTCTCGAACTTCTGACCTCAAGTGA < 41bp 1 0.580062663774615 1 0.607082784175873 experiment 0.839874672450769 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096315 chr12:72096321 . . 0 27 hm5C_associated_SNPs_9938 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 72096321 72096321 1 + C T rs146291637 72096319 + 72096299 72096339 41 TTGGCTAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTG TTGGCTAGGCTGGTCTCGAACTTCTGACCTCAAGTGATCTG < 41bp 1 0.402067641779142 1 0.039078414440155 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096319 chr12:72096321 . . 0 23 hm5C_associated_SNPs_9939 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 72096321 72096321 1 + C T rs146291637 72096322 + 72096302 72096342 41 GCTAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCC GCTAGGCTGGTCTCGAACTTCTGACCTCAAGTGATCTGCCC < 41bp 1 0.669008113865674 1 0.799500823020935 experiment 0.661983772268653 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096322 chr12:72096321 . . 0 20 hm5C_associated_SNPs_9940 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 72096321 72096321 1 + C T rs146291637 72096326 + 72096306 72096346 41 GGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCATCT GGCTGGTCTCGAACTTCTGACCTCAAGTGATCTGCCCATCT < 41bp 1 0.284046739476789 1 0.0373026728630066 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096326 chr12:72096321 . . 0 16 hm5C_associated_SNPs_9941 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 72096321 72096321 1 + C T rs146291637 72096329 + 72096309 72096349 41 TGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCATCTCAG TGGTCTCGAACTTCTGACCTCAAGTGATCTGCCCATCTCAG < 41bp 1 0.716432371144395 1 0.421679258346558 experiment 0.56713525771121 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM19 ENSG00000139291 UTR3 Human protein_coding chr12:72096329 chr12:72096321 . . 0 13 hm5C_associated_SNPs_9942 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:72096320-72096340
64251 chr12 72179738 72179738 1 + C G rs144956158 72179720 + 72179700 72179740 41 GAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCACTG GAGACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTG < 41bp 1 0.587305066287436 1 0.0784195363521576 experiment 0.825389867425129 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179720 chr12:72179738 . . 0 39 hm5C_associated_SNPs_9943 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179738 72179738 1 + C G rs144956158 72179722 + 72179702 72179742 41 GACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCACTGGC GACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGC < 41bp 1 0.60105151541517 1 0.139824390411377 experiment 0.797896969169661 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179722 chr12:72179738 . . 0 37 hm5C_associated_SNPs_9944 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179738 72179738 1 + C G rs144956158 72179723 + 72179703 72179743 41 ACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCACTGGCT ACGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCT < 41bp 1 0.61828733145767 1 0.410180807113647 experiment 0.763425337084659 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179723 chr12:72179738 . . 0 36 hm5C_associated_SNPs_9945 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179738 72179738 1 + C G rs144956158 72179724 + 72179704 72179744 41 CGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCACTGGCTT CGGAGTCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCTT < 41bp 1 0.719386598868532 1 0.776215672492981 experiment 0.561226802262937 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179724 chr12:72179738 . . 0 35 hm5C_associated_SNPs_9946 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179738 72179738 1 + C G rs144956158 72179753 + 72179733 72179773 41 GTGCACTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCC GTGCAGTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCC < 41bp 1 0.6001899697439 1 0.0453227162361145 experiment 0.799620060512199 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179753 chr12:72179738 . . 0 6 hm5C_associated_SNPs_9947 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179738 72179738 1 + C G rs144956158 72179755 + 72179735 72179775 41 GCACTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCCCA GCAGTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCCCA < 41bp 1 0.679854184511779 1 0.0459799468517303 experiment 0.640291630976443 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179755 chr12:72179738 . . 0 4 hm5C_associated_SNPs_9948 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179750 72179750 1 + C T rs552509607 72179753 + 72179733 72179773 41 GTGCACTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCC GTGCACTGGCTTGATCTTGGCTCACTGCAAGCTCCACCTCC < 41bp 1 0.647808087885755 1 0.0252914428710938 experiment 0.70438382422849 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179753 chr12:72179750 . . 0 18 hm5C_associated_SNPs_9949 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72179750 72179750 1 + C T rs552509607 72179755 + 72179735 72179775 41 GCACTGGCTTGATCTCGGCTCACTGCAAGCTCCACCTCCCA GCACTGGCTTGATCTTGGCTCACTGCAAGCTCCACCTCCCA < 41bp 1 0.712803209692433 1 0.0449181497097015 experiment 0.574393580615134 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72179755 chr12:72179750 . . 0 16 hm5C_associated_SNPs_9950 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72179711-72179754
64251 chr12 72180735 72180735 1 + A G rs17110278 72180746 + 72180726 72180766 41 GGCTTTATAAGAGATGGGTTCAGTGGTATGAGCAGAGGAAG GGCTTTATAGGAGATGGGTTCAGTGGTATGAGCAGAGGAAG < 41bp 1 0.786994326026788 1 0.500859081745148 experiment 0.426011347946424 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180746 chr12:72180735 . . 0 10 hm5C_associated_SNPs_9953 0 0 12 MOV10 POSTAR2 GSE37524,GSM921128 chr12:72180703-72180736
64251 chr12 72180754 72180754 1 + T A rs150851019 72180746 + 72180726 72180766 41 GGCTTTATAAGAGATGGGTTCAGTGGTATGAGCAGAGGAAG GGCTTTATAAGAGATGGGTTCAGTGGTAAGAGCAGAGGAAG < 41bp 1 0.773797684216463 1 0.507321953773499 experiment 0.452404631567074 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB21 ENSG00000080371 UTR3 Human protein_coding chr12:72180746 chr12:72180754 . . 0 29 hm5C_associated_SNPs_9954 0 0 14 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:72180709-72180755
64251 chr12 75893227 75893227 1 - G T rs143054392 75893207 - 75893187 75893227 41 CCATGAACAGAAAATTAAGGCCTCTAAAATCAGATCCCCTA ACATGAACAGAAAATTAAGGCCTCTAAAATCAGATCCCCTA < 41bp 1 0.25268266583934 1 0.0774025022983551 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GLIPR1;KRR1 ENSG00000111615;ENSG00000139278 UTR3 Human other chr12:75893207 chr12:75893227 . . 0 1 hm5C_associated_SNPs_9955 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:75893190-75893233
64251 chr12 93881368 93881368 1 + A G rs146944959 93881384 + 93881364 93881404 41 AGGAAGGACCTATGATAGAACAACTTAGCAAAATGTTCTTT AGGAGGGACCTATGATAGAACAACTTAGCAAAATGTTCTTT < 41bp 1 0.55195725946939 1 0.15004974603653 experiment 0.896085481061219 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93881384 chr12:93881368 synonymous SNV . 0 5 hm5C_associated_SNPs_9956 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:93881279-93881394
64251 chr12 93964379 93964379 1 + C T rs539395189 93964396 + 93964376 93964416 41 CCCCGTGGCAGGCCAAGGGCCAAGGATCGCTATCCTTCCCT CCCTGTGGCAGGCCAAGGGCCAAGGATCGCTATCCTTCCCT < 41bp 1 0.775418776359128 1 0.656058609485626 experiment 0.449162447281744 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SOCS2-AS1 ENSG00000246985 ncRNA_intronic Human processed_transcript chr12:93964396 chr12:93964379 . . 0 4 hm5C_associated_SNPs_9958 0 0 1 NONO POSTAR2 ENCODE chr12:93964360-93964409
64251 chr12 95681533 95681533 1 + A G rs61735395 95681551 + 95681531 95681571 41 AAATTAAAGTTGATTCAGCCCCACGTTCAAGCAAGCAACAA AAGTTAAAGTTGATTCAGCCCCACGTTCAAGCAAGCAACAA < 41bp 1 0.482195655069285 1 0.0363313555717468 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95681551 chr12:95681533 synonymous SNV . 0 3 hm5C_associated_SNPs_9959 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:95681510-95681538
64251 chr12 95693943 95693943 1 + G A rs17344738 95693942 + 95693922 95693962 41 TCTTTTTTTTTATTTGAAGCCGTGTTGAAATCCTTGTCTCC TCTTTTTTTTTATTTGAAGCCATGTTGAAATCCTTGTCTCC < 41bp 1 0.207395760687704 1 0.408587992191315 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95693942 chr12:95693943 nonsynonymous SNV 0.963 2 22 hm5C_associated_SNPs_9961 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:95693885-95693945
64251 chr12 98926748 98926748 1 + T C rs35998138 98926754 + 98926734 98926774 41 GGGCAGTACCGAACTACAGGCAGCTAAGAAAGTACATACTT GGGCAGTACCGAACCACAGGCAGCTAAGAAAGTACATACTT < 41bp 1 0.469580150690476 1 0.258861005306244 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98926754 chr12:98926748 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_9962 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr12:98926657-98926752
64251 chr12 98941390 98941390 1 + G A rs144913822 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGGCCGACCATTAGAACTCAGTGATTTCAGGATGGAGGA < 41bp 1 0.658522337902689 1 0.412046551704407 experiment 0.682955324194621 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941390 synonymous SNV . 0 9 hm5C_associated_SNPs_9963 1 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:98941350-98941391
64251 chr12 98993624 98993624 1 + A G rs12297282 98993622 + 98993602 98993642 41 AATGACATGCATTTATGCTGCCATTTGTTACTATCAGGACT AATGACATGCATTTATGCTGCCGTTTGTTACTATCAGGACT < 41bp 1 0.0559233711244435 1 0.142075330018997 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA53 ENSG00000212443 ncRNA_exonic Human snoRNA chr12:98993622 chr12:98993624 . . 0 23 hm5C_associated_SNPs_9964 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:98993600-98993640
64251 chr12 98993624 98993624 1 + A G rs12297282 98993641 + 98993621 98993661 41 GCCATTTGTTACTATCAGGACTCGACTCGTGTGCGGACATT GCCGTTTGTTACTATCAGGACTCGACTCGTGTGCGGACATT < 41bp 1 0.620136878511732 1 0.426465153694153 experiment 0.759726242976535 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA53 ENSG00000212443 ncRNA_exonic Human snoRNA chr12:98993641 chr12:98993624 . . 0 4 hm5C_associated_SNPs_9965 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:98993600-98993640
64251 chr12 98993643 98993643 1 + C G rs7955537 98993641 + 98993621 98993661 41 GCCATTTGTTACTATCAGGACTCGACTCGTGTGCGGACATT GCCATTTGTTACTATCAGGACTGGACTCGTGTGCGGACATT < 41bp 1 0.650553283682314 1 0.0865921378135681 experiment 0.698893432635373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA53 ENSG00000212443 ncRNA_exonic Human snoRNA chr12:98993641 chr12:98993643 . . 0 23 hm5C_associated_SNPs_9966 0 0 27 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:98993528-98993661
64251 chr12 98993643 98993643 1 + C G rs7955537 98993654 + 98993634 98993674 41 ATCAGGACTCGACTCGTGTGCGGACATTTCTGTTAATAATG ATCAGGACTGGACTCGTGTGCGGACATTTCTGTTAATAATG < 41bp 1 0.181132281415482 1 0.171223282814026 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA53 ENSG00000212443 ncRNA_exonic Human snoRNA chr12:98993654 chr12:98993643 . . 0 10 hm5C_associated_SNPs_9967 0 0 27 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:98993528-98993661
64251 chr12 98993643 98993643 1 + C G rs7955537 98993658 + 98993638 98993678 41 GGACTCGACTCGTGTGCGGACATTTCTGTTAATAATGACAG GGACTGGACTCGTGTGCGGACATTTCTGTTAATAATGACAG < 41bp 1 0.0543396867986993 1 0.102393537759781 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA53 ENSG00000212443 ncRNA_exonic Human snoRNA chr12:98993658 chr12:98993643 . . 0 6 hm5C_associated_SNPs_9968 0 0 27 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:98993528-98993661
64251 chr12 99039425 99039425 1 + A G rs569512005 99039429 + 99039409 99039449 41 CGCCCCGGGGCTGCAGAGATCCAGGGGAGGCGCCTGTGAGG CGCCCCGGGGCTGCAGGGATCCAGGGGAGGCGCCTGTGAGG < 41bp 1 0.799830103510879 1 0.943620502948761 experiment 0.400339792978243 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APAF1 ENSG00000120868 UTR5 Human protein_coding chr12:99039429 chr12:99039425 . . 0 17 hm5C_associated_SNPs_9969 0 0 1 DDX3X POSTAR2 ENCODE chr12:99039368-99039473
64251 chr12 101674902 101674902 1 + A G rs78240090 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACGTTTGCTGAACGACTGGGGAATGTTAATATTGAT < 41bp 1 0.380270322492329 1 0.17942413687706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674902 synonymous SNV . 0 8 hm5C_associated_SNPs_9977 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chr12 101674913 101674913 1 + G A rs151017457 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACATTTGCTGAACAACTGGGGAATGTTAATATTGAT < 41bp 1 0.412128028160402 1 0.294387340545654 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674913 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_9978 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chr12 101680177 101680177 1 + G A rs139691544 101680176 + 101680156 101680196 41 GTTTTTTTTGACTATCACCTCGATCCTGGAGACTCAGGACA GTTTTTTTTGACTATCACCTCAATCCTGGAGACTCAGGACA < 41bp 1 0.0779099786049237 1 0.14086377620697 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101680176 chr12:101680177 synonymous SNV . 0 22 hm5C_associated_SNPs_9979 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:101680171-101680196
64251 chr12 102271481 102271481 1 + G A rs530301841 102271484 + 102271464 102271504 41 CGTCCGTGAGTGTACGCGCCCGGCCGCCGCCTCCAGGCAGC CGTCCGTGAGTGTACGCACCCGGCCGCCGCCTCCAGGCAGC < 41bp 1 0.7767586196051 1 0.397838175296783 experiment 0.4464827607898 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DRAM1 ENSG00000136048 UTR5 Human protein_coding chr12:102271484 chr12:102271481 . . 0 18 hm5C_associated_SNPs_9985 0 0 3 DDX3X POSTAR2 ENCODE chr12:102271414-102271517
64251 chr12 102517804 102517804 1 + G A rs2036771 102517803 + 102517783 102517823 41 GGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGGTTG GGCATTGCAGCTTTCTATGGCAGAGAACAACAAACAGGTTG < 41bp 1 0.658786995227101 1 0.389066278934479 experiment 0.682426009545799 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102517803 chr12:102517804 synonymous SNV . 0 22 hm5C_associated_SNPs_9986 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102517707-102517816
64251 chr12 104324182 104324182 1 + C G rs2070908 104324198 + 104324178 104324218 41 CTTGCGGTGTAGTGGGCGGACCGCGCGGCTGGAGGTGTGAG CTTGGGGTGTAGTGGGCGGACCGCGCGGCTGGAGGTGTGAG < 41bp 1 0.637890729541478 1 0.548455238342285 experiment 0.724218540917045 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSP90B1 ENSG00000166598 UTR5 Human protein_coding chr12:104324198 chr12:104324182 . . 0 5 hm5C_associated_SNPs_9987 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:104324180-104324200
64251 chr12 104324182 104324182 1 + C G rs2070908 104324199 + 104324179 104324219 41 TTGCGGTGTAGTGGGCGGACCGCGCGGCTGGAGGTGTGAGG TTGGGGTGTAGTGGGCGGACCGCGCGGCTGGAGGTGTGAGG < 41bp 1 0.724501025091764 1 0.698909759521484 experiment 0.550997949816472 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSP90B1 ENSG00000166598 UTR5 Human protein_coding chr12:104324199 chr12:104324182 . . 0 4 hm5C_associated_SNPs_9988 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:104324180-104324200
64251 chr12 104327979 104327979 1 + C G rs6615 104327970 + 104327950 104327990 41 ATTGTCACTTCAAAACACAACAACGATACCCAGCACATCTG ATTGTCACTTCAAAACACAACAACGATACGCAGCACATCTG < 41bp 1 0.45334790961176 1 0.158398598432541 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327970 chr12:104327979 synonymous SNV . 0 30 hm5C_associated_SNPs_9989 0 0 23 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:104327953-104327985
64251 chr12 104378664 104378664 1 + G A rs140299122 104378675 + 104378655 104378695 41 CGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC CGTTCAAGAAGTGCAATATACATTTGACCTACAGCTTGCCC < 41bp 1 0.198443027114784 1 0.0417838096618652 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TDG ENSG00000139372 CDS Human protein_coding chr12:104378675 chr12:104378664 synonymous SNV . 0 10 hm5C_associated_SNPs_9990 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104378650-104378669
64251 chr12 104720157 104720157 1 + A G rs34368560 104720169 + 104720149 104720189 41 GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA GCTTGCACGAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA < 41bp 1 0.247154327146668 1 0.0528908371925354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720169 chr12:104720157 synonymous SNV . 0 9 hm5C_associated_SNPs_9991 0 0 6 HNRNPU POSTAR2 GSE34491,GSM850170 chr12:104720140-104720160
64251 chr12 104720178 104720178 1 + C T rs542165610 104720169 + 104720149 104720189 41 GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA GCTTGCACAAGAAAAATTGGCTTAGAAACTGTAGGGGTGAA < 41bp 1 0.168634035016367 1 0.0445185899734497 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720169 chr12:104720178 synonymous SNV . 0 30 hm5C_associated_SNPs_9992 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104720156-104720198
64251 chr12 104743461 104743461 1 + C T rs35232644 104743465 + 104743445 104743485 41 GAGGATTCTATCTCAGCTGTCTTTTCTAACTGTGTAGGTTG GAGGATTCTATCTCAGTTGTCTTTTCTAACTGTGTAGGTTG < 41bp 1 0.0973001457041548 1 0.0268073976039886 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TXNRD1 ENSG00000198431 UTR3 Human protein_coding chr12:104743465 chr12:104743461 . . 0 17 hm5C_associated_SNPs_9993 0 0 26 PTBP1 POSTAR2 GSE19323,GSM480477 chr12:104743460-104743480
64251 chr12 105519861 105519861 1 + C T rs200763691 105519876 + 105519856 105519896 41 ATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG ATTTGTACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG < 41bp 1 0.169987134787714 1 0.118732005357742 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519876 chr12:105519861 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_9994 1 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519873 105519873 1 + G A rs35267264 105519876 + 105519856 105519896 41 ATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG ATTTGCACATAGTATTCAGTCAATTTTTGCAAATGTAGAAG < 41bp 1 0.234329230900091 1 0.162818759679794 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519876 chr12:105519873 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_9995 2 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519873 105519873 1 + G A rs35267264 105519885 + 105519865 105519905 41 TAGTATTCGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG TAGTATTCAGTCAATTTTTGCAAATGTAGAAGCCAAACTTG < 41bp 1 0.274004295337448 1 0.282398879528046 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519885 chr12:105519873 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_9996 2 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 108086634 108086634 1 + C T rs77478466 108086614 + 108086594 108086634 41 CTGAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTAC CTGAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTAT < 41bp 1 0.490148403875699 1 0.210632681846619 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086614 chr12:108086634 synonymous SNV . 0 41 hm5C_associated_SNPs_10001 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr12 108086634 108086634 1 + C T rs77478466 108086616 + 108086596 108086636 41 GAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTACGG GAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTATGG < 41bp 1 0.717360707669518 1 0.412979602813721 experiment 0.565278584660965 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086616 chr12:108086634 synonymous SNV . 0 39 hm5C_associated_SNPs_10002 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr12 109539760 109539760 1 + C A rs376918741 109539764 + 109539744 109539784 41 GACCTAATCAAGCTCACGGGCTCTGCTTTAGTGTTCAAAGG GACCTAATCAAGCTCAAGGGCTCTGCTTTAGTGTTCAAAGG < 41bp 1 0.311741747933699 1 0.22651219367981 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109539764 chr12:109539760 nonsynonymous SNV 0.856 4 17 hm5C_associated_SNPs_10004 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:109539706-109539776
64251 chr12 109547675 109547675 1 + G T rs576935575 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TACAGACGGCTCATCCCTCCCCTTTTTCAGTGTATAGAGGG < 41bp 1 0.0372063891330166 1 0.0481332838535309 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547675 nonsynonymous SNV 0.790 1 26 hm5C_associated_SNPs_10005 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr12 110474070 110474070 1 + T C rs2287174 110474069 + 110474049 110474089 41 ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAAT ACATTTGTCTTTGCCAGGAACCTTCAGGACCAGCTTCGAAT < 41bp 1 0.0132239305707759 1 0.0408380031585693 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110474069 chr12:110474070 nonsynonymous SNV 0.986 0 22 hm5C_associated_SNPs_10010 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:110474066-110474086
64251 chr12 110784860 110784860 1 + G A rs180855540 110784845 + 110784825 110784865 41 CCCCACCCCACCCCACCTCTCCCCACCTTACCCCCGCCCCG CCCCACCCCACCCCACCTCTCCCCACCTTACCCCCACCCCG < 41bp 1 0.31600639584957 1 0.542409956455231 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110784845 chr12:110784860 . . 0 36 hm5C_associated_SNPs_10011 0 0 33 TARDBP POSTAR2 DRA001158,DRS012386 chr12:110784733-110784912
64251 chr12 110785936 110785936 1 + G A rs116445475 110785935 + 110785915 110785955 41 CTATTGCTAAAATGAGGGTTCGCAGCTGCCAGGAGTCATCC CTATTGCTAAAATGAGGGTTCACAGCTGCCAGGAGTCATCC < 41bp 1 0.434345921240443 1 0.0437119007110596 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110785935 chr12:110785936 . . 0 22 hm5C_associated_SNPs_10012 0 0 8 U2AF2 POSTAR2 GSE83923,CSM2221658 chr12:110785920-110785940
64251 chr12 111884608 111884608 1 + T A rs3184504 111884617 + 111884597 111884637 41 AGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAAC AGGAGGTCCGGAGGTGCACACGGCTTGAGATGCCTGACAAC < 41bp 1 0.609088317979883 1 0.646842837333679 experiment 0.781823364040234 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884617 chr12:111884608 nonsynonymous SNV 0.074 0 12 hm5C_associated_SNPs_10021 0 1 2 BUD13 POSTAR2 ENCODE chr12:111884524-111884611
64251 chr12 111884619 111884619 1 + G A rs143256866 111884617 + 111884597 111884637 41 AGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAAC AGGAGGTCCGGTGGTGCACACGACTTGAGATGCCTGACAAC < 41bp 1 0.45257923397087 1 0.253947228193283 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884617 chr12:111884619 synonymous SNV . 0 23 hm5C_associated_SNPs_10022 0 0 1 DDX24 POSTAR2 ENCODE chr12:111884575-111884630
64251 chr12 111885999 111885999 1 + C T rs150476570 111886014 + 111885994 111886034 41 TGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGAC TGCAGTACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGAC < 41bp 1 0.193341685553161 1 0.284860789775848 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111886014 chr12:111885999 nonsynonymous SNV 0.802 0 6 hm5C_associated_SNPs_10023 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:111885984-111886010
64251 chr12 111886024 111886024 1 + G A rs201102821 111886014 + 111885994 111886034 41 TGCAGCACCTGGAGCATGAGCCTGTGAATCGAGCCCGGGAC TGCAGCACCTGGAGCATGAGCCTGTGAATCAAGCCCGGGAC < 41bp 1 0.198583116040376 1 0.108611285686493 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111886014 chr12:111886024 nonsynonymous SNV 0.594 0 31 hm5C_associated_SNPs_10024 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:111885996-111886044
64251 chr12 111887974 111887974 1 + G A rs11065905 111887981 + 111887961 111888001 41 AGGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTA AGGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTA < 41bp 1 0.0502913161557011 1 0.0868801772594452 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH2B3 ENSG00000111252 UTR3 Human protein_coding chr12:111887981 chr12:111887974 . . 0 14 hm5C_associated_SNPs_10025 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:111887947-111887988
64251 chr12 111887974 111887974 1 + G A rs11065905 111887982 + 111887962 111888002 41 GGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTAC GGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTAC < 41bp 1 0.220670437116934 1 0.0575457811355591 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH2B3 ENSG00000111252 UTR3 Human protein_coding chr12:111887982 chr12:111887974 . . 0 13 hm5C_associated_SNPs_10026 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:111887947-111887988
64251 chr12 111887974 111887974 1 + G A rs11065905 111887984 + 111887964 111888004 41 TGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAG TGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAG < 41bp 1 0.304165493256231 1 0.0736421048641205 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH2B3 ENSG00000111252 UTR3 Human protein_coding chr12:111887984 chr12:111887974 . . 0 11 hm5C_associated_SNPs_10027 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:111887947-111887988
64251 chr12 111887974 111887974 1 + G A rs11065905 111887985 + 111887965 111888005 41 GATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGG GATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGG < 41bp 1 0.336072390260412 1 0.193983048200607 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH2B3 ENSG00000111252 UTR3 Human protein_coding chr12:111887985 chr12:111887974 . . 0 10 hm5C_associated_SNPs_10028 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:111887947-111887988
64251 chr12 111887974 111887974 1 + G A rs11065905 111887986 + 111887966 111888006 41 ATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGC ATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGC < 41bp 1 0.479615424330975 1 0.504068315029144 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SH2B3 ENSG00000111252 UTR3 Human protein_coding chr12:111887986 chr12:111887974 . . 0 9 hm5C_associated_SNPs_10029 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:111887947-111887988
64251 chr12 112229159 112229159 1 + C T rs543030829 112229155 + 112229135 112229175 41 ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATT ACATTGTGCCTGGATTTGGCCCCATGGCTGGGGCCGCCATT < 41bp 1 0.185851909233795 1 0.0331903994083405 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229155 chr12:112229159 nonsynonymous SNV 0.113 3 25 hm5C_associated_SNPs_10034 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229159 112229159 1 + C T rs543030829 112229156 + 112229136 112229176 41 CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTG CATTGTGCCTGGATTTGGCCCCATGGCTGGGGCCGCCATTG < 41bp 1 0.143849679632793 1 0.174940705299377 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229156 chr12:112229159 nonsynonymous SNV 0.113 3 24 hm5C_associated_SNPs_10035 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229159 112229159 1 + C T rs543030829 112229157 + 112229137 112229177 41 ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTGC ATTGTGCCTGGATTTGGCCCCATGGCTGGGGCCGCCATTGC < 41bp 1 0.488178352711689 1 0.2167147397995 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229157 chr12:112229159 nonsynonymous SNV 0.113 3 23 hm5C_associated_SNPs_10036 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229159 112229159 1 + C T rs543030829 112229168 + 112229148 112229188 41 ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG ATTTGGCCCCATGGCTGGGGCCGCCATTGCCTCCCATGAGG < 41bp 1 0.151190990082055 1 0.102367401123047 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229168 chr12:112229159 nonsynonymous SNV 0.113 3 12 hm5C_associated_SNPs_10037 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229159 112229159 1 + C T rs543030829 112229169 + 112229149 112229189 41 TTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGA TTTGGCCCCATGGCTGGGGCCGCCATTGCCTCCCATGAGGA < 41bp 1 0.751234962561898 1 0.779237866401672 experiment 0.497530074876205 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229169 chr12:112229159 nonsynonymous SNV 0.113 3 11 hm5C_associated_SNPs_10038 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112280327 112280327 1 + C T rs551575055 112280326 + 112280306 112280346 41 CCTGTCCCCAGGGGCCGCCGCCTCCGCCGCTGCTGCTGCCG CCTGTCCCCAGGGGCCGCCGCTTCCGCCGCTGCTGCTGCCG < 41bp 1 0.371172681651362 1 0.234799176454544 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAPKAPK5-AS1 ENSG00000234608 ncRNA_exonic Human lincRNA chr12:112280326 chr12:112280327 . . 0 22 hm5C_associated_SNPs_10043 0 0 2 GEMIN5 POSTAR2 ENCODE chr12:112280307-112280361
64251 chr12 112460749 112460749 1 + A G rs7114 112460730 + 112460710 112460750 41 AGAGAGGAGAGAGGAGTGTACTGCCCAGGTCTTTGACAGAT AGAGAGGAGAGAGGAGTGTACTGCCCAGGTCTTTGACAGGT < 41bp 1 0.525966280789401 1 0.112075328826904 experiment 0.948067438421198 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ERP29 ENSG00000089248 UTR3 Human protein_coding chr12:112460730 chr12:112460749 . . 0 40 hm5C_associated_SNPs_10044 0 1 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:112460406-112460785
64251 chr12 112579920 112579920 1 + A G rs61743643 112579938 + 112579918 112579958 41 GAATAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAGAGA GAGTAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAGAGA < 41bp 1 0.292087766993461 1 0.429946810007095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112579938 chr12:112579920 nonsynonymous SNV 0.895 0 3 hm5C_associated_SNPs_10045 0 0 2 BUD13 POSTAR2 ENCODE chr12:112579889-112579931
64251 chr12 112856826 112856826 1 + G A rs531915358 112856829 + 112856809 112856849 41 CGCGTCCGGTCCCGAGCGGGCCTCCCTCGGGCCAGCCCGAT CGCGTCCGGTCCCGAGCAGGCCTCCCTCGGGCCAGCCCGAT < 41bp 1 0.31337911527898 1 0.0994118452072144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 UTR5 Human protein_coding chr12:112856829 chr12:112856826 . . 0 18 hm5C_associated_SNPs_10047 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:112856800-112856863
64251 chr12 112856826 112856826 1 + G A rs531915358 112856830 + 112856810 112856850 41 GCGTCCGGTCCCGAGCGGGCCTCCCTCGGGCCAGCCCGATG GCGTCCGGTCCCGAGCAGGCCTCCCTCGGGCCAGCCCGATG < 41bp 1 0.592757883401184 1 0.206408023834229 experiment 0.814484233197632 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPN11 ENSG00000179295 UTR5 Human protein_coding chr12:112856830 chr12:112856826 . . 0 17 hm5C_associated_SNPs_10048 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:112856800-112856863
64251 chr12 112856826 112856826 1 + G A rs531915358 112856832 + 112856812 112856852 41 GTCCGGTCCCGAGCGGGCCTCCCTCGGGCCAGCCCGATGTG GTCCGGTCCCGAGCAGGCCTCCCTCGGGCCAGCCCGATGTG < 41bp 1 0.306335241178096 1 0.0603794753551483 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN11 ENSG00000179295 UTR5 Human protein_coding chr12:112856832 chr12:112856826 . . 0 15 hm5C_associated_SNPs_10049 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:112856800-112856863
64251 chr12 112915755 112915755 1 + G A rs535800148 112915765 + 112915745 112915785 41 GACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGAT GACTTTTGGCAGATGGTGTTCCAAGAAAACTCCCGAGTGAT < 41bp 1 0.251271901122231 1 0.241689234972 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915765 chr12:112915755 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_10050 1 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr12 112915755 112915755 1 + G A rs535800148 112915766 + 112915746 112915786 41 ACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGATT ACTTTTGGCAGATGGTGTTCCAAGAAAACTCCCGAGTGATT < 41bp 1 0.753075212518123 1 0.306508600711823 experiment 0.493849574963755 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915766 chr12:112915755 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_10051 1 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr12 113596736 113596736 1 - G A rs2305901 113596717 - 113596697 113596737 41 GCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG GTGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG < 41bp 1 0.303406432849639 1 0.341778516769409 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596717 chr12:113596736 synonymous SNV . 0 2 hm5C_associated_SNPs_10053 0 0 1 FMR1 POSTAR2 ENCODE chr12:113596729-113596792
64251 chr12 113596736 113596736 1 - G A rs2305901 113596718 - 113596698 113596738 41 GGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT GGTGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT < 41bp 1 0.25079188108683 1 0.415078520774841 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596718 chr12:113596736 synonymous SNV . 0 3 hm5C_associated_SNPs_10054 0 0 1 FMR1 POSTAR2 ENCODE chr12:113596729-113596792
64251 chr12 113629637 113629637 1 + G A rs73208734 113629651 + 113629631 113629671 41 CATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCC CATCAGAGTTGCCTATGGGGCCACGGCGACAGGTATGGCCC < 41bp 1 0.387731177282451 1 0.411594271659851 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629651 chr12:113629637 . . 0 7 hm5C_associated_SNPs_10055 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:113629620-113629640
64251 chr12 113629637 113629637 1 + G A rs73208734 113629652 + 113629632 113629672 41 ATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCCC ATCAGAGTTGCCTATGGGGCCACGGCGACAGGTATGGCCCC < 41bp 1 0.746929639903941 1 0.441823124885559 experiment 0.506140720192118 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629652 chr12:113629637 . . 0 6 hm5C_associated_SNPs_10056 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:113629620-113629640
64251 chr12 113629655 113629655 1 + G A rs11832314 113629651 + 113629631 113629671 41 CATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCC CATCAGGGTTGCCTATGGGGCCACAGCGACAGGTATGGCCC < 41bp 1 0.460527821273932 1 0.413739532232285 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629651 chr12:113629655 . . 0 25 hm5C_associated_SNPs_10057 0 0 2 IGF2BP1 POSTAR2 ENCODE chr12:113629634-113629695
64251 chr12 113629655 113629655 1 + G A rs11832314 113629652 + 113629632 113629672 41 ATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCCC ATCAGGGTTGCCTATGGGGCCACAGCGACAGGTATGGCCCC < 41bp 1 0.525245473076376 1 0.463913440704346 experiment 0.949509053847247 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629652 chr12:113629655 . . 0 24 hm5C_associated_SNPs_10058 0 0 2 IGF2BP1 POSTAR2 ENCODE chr12:113629634-113629695
64251 chr12 113629657 113629657 1 + C T rs16942608 113629651 + 113629631 113629671 41 CATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCC CATCAGGGTTGCCTATGGGGCCACGGTGACAGGTATGGCCC < 41bp 1 0.428353574281361 1 0.365147292613983 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629651 chr12:113629657 . . 0 27 hm5C_associated_SNPs_10059 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:113629656-113629682
64251 chr12 113629657 113629657 1 + C T rs16942608 113629652 + 113629632 113629672 41 ATCAGGGTTGCCTATGGGGCCACGGCGACAGGTATGGCCCC ATCAGGGTTGCCTATGGGGCCACGGTGACAGGTATGGCCCC < 41bp 1 0.792426638720479 1 0.524285316467285 experiment 0.415146722559042 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RITA1 ENSG00000257286 ncRNA_intronic Human antisense chr12:113629652 chr12:113629657 . . 0 26 hm5C_associated_SNPs_10060 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:113629656-113629682
64251 chr12 117290433 117290433 1 + G A rs16947055 117290441 + 117290421 117290461 41 CTGGTTTTTATCGGAAAGATCATCCTGCCTGCAGATGCTGT CTGGTTTTTATCAGAAAGATCATCCTGCCTGCAGATGCTGT < 41bp 1 0.0599581743860279 1 0.0455616414546967 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNFT2 ENSG00000135119 UTR3 Human protein_coding chr12:117290441 chr12:117290433 . . 0 13 hm5C_associated_SNPs_10071 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:117290403-117290433
64251 chr12 118465820 118465820 1 + T C rs5745873 118465804 + 118465784 118465824 41 GGGTTGGCACTGCATGATATCCTGACAGAGATACACTTGTT GGGTTGGCACTGCATGATATCCTGACAGAGATACACCTGTT < 41bp 1 0.539534791261351 1 0.114154487848282 experiment 0.920930417477299 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RFC5 ENSG00000111445 CDS Human protein_coding chr12:118465804 chr12:118465820 synonymous SNV . 0 37 hm5C_associated_SNPs_10073 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:118465757-118465832
64251 chr12 120898044 120898044 1 + G A rs548199 120898045 + 120898025 120898065 41 TGGAAGACATTATTTATCTGCCTTTAACTCCCCCCAAAGGA TGGAAGACATTATTTATCTACCTTTAACTCCCCCCAAAGGA < 41bp 1 0.0182766479810884 1 0.0539238154888153 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GATC ENSG00000257218 UTR3 Human protein_coding chr12:120898045 chr12:120898044 . . 0 20 hm5C_associated_SNPs_10076 0 0 19 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:120897979-120898062
64251 chr12 120898046 120898046 1 + C T rs77885026 120898045 + 120898025 120898065 41 TGGAAGACATTATTTATCTGCCTTTAACTCCCCCCAAAGGA TGGAAGACATTATTTATCTGCTTTTAACTCCCCCCAAAGGA < 41bp 1 0.0397627856427734 1 0.0455041825771332 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GATC ENSG00000257218 UTR3 Human protein_coding chr12:120898045 chr12:120898046 . . 0 22 hm5C_associated_SNPs_10077 0 0 18 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:120897979-120898062
64251 chr12 120898058 120898058 1 + C A rs185444465 120898045 + 120898025 120898065 41 TGGAAGACATTATTTATCTGCCTTTAACTCCCCCCAAAGGA TGGAAGACATTATTTATCTGCCTTTAACTCCCCACAAAGGA < 41bp 1 0.0143040210576536 1 0.059346079826355 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GATC ENSG00000257218 UTR3 Human protein_coding chr12:120898045 chr12:120898058 . . 0 34 hm5C_associated_SNPs_10078 0 0 17 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:120897979-120898062
64251 chr12 121135958 121135958 1 + A T rs144771428 121135954 + 121135934 121135974 41 TCAGCTTGGGCTGGAGCAGTCAATATAGGATCTCAGGCCAG TCAGCTTGGGCTGGAGCAGTCAATTTAGGATCTCAGGCCAG < 41bp 1 0.324569593225039 1 0.42089056968689 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MLEC ENSG00000256364 ncRNA_intronic Human antisense chr12:121135954 chr12:121135958 . . 0 25 hm5C_associated_SNPs_10079 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:121135940-121135960
64251 chr12 121660804 121660804 1 + T C rs141459292 121660807 + 121660787 121660827 41 TGTCAAGACGTGTGAGGTGGCGGCCTGGTGCCCGGTGGAGG TGTCAAGACGTGTGAGGCGGCGGCCTGGTGCCCGGTGGAGG < 41bp 1 0.485082420683449 1 0.495354324579239 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121660807 chr12:121660804 nonsynonymous SNV 0.935 4 18 hm5C_associated_SNPs_10081 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:121660800-121660824
64251 chr12 121660820 121660820 1 + G A rs188674773 121660807 + 121660787 121660827 41 TGTCAAGACGTGTGAGGTGGCGGCCTGGTGCCCGGTGGAGG TGTCAAGACGTGTGAGGTGGCGGCCTGGTGCCCAGTGGAGG < 41bp 1 0.540982364034117 1 0.537108600139618 experiment 0.918035271931766 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121660807 chr12:121660820 synonymous SNV . 0 34 hm5C_associated_SNPs_10082 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:121660800-121660824
64251 chr12 122215259 122215259 1 + C T rs73413720 122215240 + 122215220 122215260 41 TATGTTGCCCAGGCTGGTCTCCAACTCATGGGCTCAACTCA TATGTTGCCCAGGCTGGTCTCCAACTCATGGGCTCAACTTA < 41bp 1 0.0336130492703469 1 0.385080516338348 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM120B ENSG00000188735 UTR3 Human protein_coding chr12:122215240 chr12:122215259 . . 0 40 hm5C_associated_SNPs_10083 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:122215240-122215260
64251 chr12 122216622 122216622 1 - A G rs3741590 122216631 - 122216611 122216651 41 TTTTCTGTGGACTGTTCCCCCCACTGTGGTAGGACAGGACT TTTTCTGTGGACTGTTCCCCCCACTGTGGCAGGACAGGACT < 41bp 1 0.287684962183147 1 0.239741832017899 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOF;TMEM120B ENSG00000139725;ENSG00000188735 UTR3 Human other chr12:122216631 chr12:122216622 . . 0 30 hm5C_associated_SNPs_10084 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122216554-122216667
64251 chr12 122216629 122216629 1 - T C rs3741589 122216631 - 122216611 122216651 41 TTTTCTGTGGACTGTTCCCCCCACTGTGGTAGGACAGGACT TTTTCTGTGGACTGTTCCCCCCGCTGTGGTAGGACAGGACT < 41bp 1 0.362796500544374 1 0.199169725179672 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOF;TMEM120B ENSG00000139725;ENSG00000188735 UTR3 Human other chr12:122216631 chr12:122216629 . . 0 23 hm5C_associated_SNPs_10085 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122216554-122216667
64251 chr12 122252119 122252119 1 + G A rs534731512 122252118 + 122252098 122252138 41 CATGGTGGTGACCCCAGGAGCGGCAGCCGTGGCAGCCCCTT CATGGTGGTGACCCCAGGAGCAGCAGCCGTGGCAGCCCCTT < 41bp 1 0.743846775102974 1 0.690053939819336 experiment 0.512306449794051 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122252118 chr12:122252119 synonymous SNV . 0 22 hm5C_associated_SNPs_10086 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:122252115-122252158
64251 chr12 122260540 122260540 1 + C T rs192950528 122260559 + 122260539 122260579 41 CCGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG CTGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG < 41bp 1 0.0238615870530303 1 0.0504000782966614 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260559 chr12:122260540 nonsynonymous SNV 0.045 0 2 hm5C_associated_SNPs_10087 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122260518-122260567
64251 chr12 122260547 122260547 1 + C G rs114351527 122260559 + 122260539 122260579 41 CCGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG CCGGAGCCGCTTGCCGAGGACCACCCCCCGCATACTCCAGG < 41bp 1 0.0320918380251375 1 0.0661792755126953 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260559 chr12:122260547 synonymous SNV . 0 9 hm5C_associated_SNPs_10088 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122260518-122260567
64251 chr12 122260549 122260549 1 + T C rs58801491 122260559 + 122260539 122260579 41 CCGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG CCGGAGCCCCCTGCCGAGGACCACCCCCCGCATACTCCAGG < 41bp 1 0.0243832930530807 1 0.0610147714614868 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260559 chr12:122260549 nonsynonymous SNV 0.001 0 11 hm5C_associated_SNPs_10089 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122260518-122260567
64251 chr12 122260562 122260562 1 + C A rs374510760 122260559 + 122260539 122260579 41 CCGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG CCGGAGCCCCTTGCCGAGGACCAACCCCCGCATACTCCAGG < 41bp 1 0.0194566762579952 1 0.0578855574131012 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260559 chr12:122260562 nonsynonymous SNV 0.145 0 24 hm5C_associated_SNPs_10090 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122260518-122260567
64251 chr12 122268164 122268164 1 + A C rs375869712 122268148 + 122268128 122268168 41 CGGGGGACCCTCAACTAGGCCCCGGCACCAGACTCAAAGGA CGGGGGACCCTCAACTAGGCCCCGGCACCAGACTCACAGGA < 41bp 1 0.22773707163991 1 0.23034480214119 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SETD1B ENSG00000139718 UTR3 Human protein_coding chr12:122268148 chr12:122268164 . . 0 37 hm5C_associated_SNPs_10099 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:122268160-122268180
64251 chr12 122268164 122268164 1 + A C rs375869712 122268149 + 122268129 122268169 41 GGGGGACCCTCAACTAGGCCCCGGCACCAGACTCAAAGGAT GGGGGACCCTCAACTAGGCCCCGGCACCAGACTCACAGGAT < 41bp 1 0.103317483685765 1 0.458770036697388 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SETD1B ENSG00000139718 UTR3 Human protein_coding chr12:122268149 chr12:122268164 . . 0 36 hm5C_associated_SNPs_10100 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:122268160-122268180
64251 chr12 122626381 122626381 1 + G A rs11057509 122626400 + 122626380 122626420 41 CGCATGAGATGCCAGGAGACCCTTCCCTGCCCATGGAGAGT CACATGAGATGCCAGGAGACCCTTCCCTGCCCATGGAGAGT < 41bp 1 0.00684627212283341 1 0.0597214698791504 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MLXIP ENSG00000175727 UTR3 Human protein_coding chr12:122626400 chr12:122626381 . . 0 2 hm5C_associated_SNPs_10101 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122626381-122626408
64251 chr12 123028739 123028739 1 + A G rs61751320 123028737 + 123028717 123028757 41 AATCAAGTCCAGTTTTATTTCTACTGAAAATTATCATACTC AATCAAGTCCAGTTTTATTTCTGCTGAAAATTATCATACTC < 41bp 1 0.407907558407711 1 0.583759665489197 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123028737 chr12:123028739 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_10102 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:123028720-123028740
64251 chr12 123461522 123461522 1 + G A rs202209787 123461515 + 123461495 123461535 41 CCAGCGGCTGGAGACAGTATCGGGTGAGGTCCTGGCCCTGA CCAGCGGCTGGAGACAGTATCGGGTGAAGTCCTGGCCCTGA < 41bp 1 0.762411715019256 1 0.970607876777649 experiment 0.475176569961488 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGFOD2 ENSG00000256028 ncRNA_exonic Human processed_transcript chr12:123461515 chr12:123461522 . . 0 28 hm5C_associated_SNPs_10130 0 0 6 BUD13 POSTAR2 ENCODE chr12:123461489-123461564
64251 chr12 123462962 123462962 1 + G A rs60641861 123462972 + 123462952 123462992 41 CCACATTCAGGCCAACAGACCATCCCTCCTTCCACAGAGGA CCACATTCAGACCAACAGACCATCCCTCCTTCCACAGAGGA < 41bp 1 0.0308016317659386 1 0.0766871273517609 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGFOD2 ENSG00000256028 ncRNA_exonic Human processed_transcript chr12:123462972 chr12:123462962 . . 0 11 hm5C_associated_SNPs_10131 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:123462961-123462962
64251 chr12 124144395 124144395 1 + A C rs1051793 124144415 + 124144395 124144435 41 AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCGAA CGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCGAA < 41bp 1 0.364105177022496 1 0.0457051396369934 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144415 chr12:124144395 nonsynonymous SNV . 0 1 hm5C_associated_SNPs_10132 0 1 2 UPF1 POSTAR2 GSE69586,GSM1704218 chr12:124144384-124144405
64251 chr12 124210782 124210782 1 + T A rs1399961 124210800 + 124210780 124210820 41 AGTGATTCTTTGTTGGATTACAGCTGTATGCAGAGGCTGGG AGAGATTCTTTGTTGGATTACAGCTGTATGCAGAGGCTGGG < 41bp 1 0.55726200405751 1 0.18140697479248 experiment 0.885475991884981 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124210800 chr12:124210782 nonsynonymous SNV 0.112 1 3 hm5C_associated_SNPs_10133 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124210760-124210802
64251 chr12 124498464 124498464 1 + G A rs150261024 124498454 + 124498434 124498474 41 TGATACCCCTTCATTGATTACTGTGTATCAGTTCTTTGTTA TGATACCCCTTCATTGATTACTGTGTATCAATTCTTTGTTA < 41bp 1 0.206977730876072 1 0.0495319664478302 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF664 ENSG00000179195 UTR3 Human protein_coding chr12:124498454 chr12:124498464 . . 0 31 hm5C_associated_SNPs_10136 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:124498360-124498480
64251 chr12 125424530 125424530 1 + T C rs140737361 125424522 + 125424502 125424542 41 ACAAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATGCT ACAAGGGGTAGGGGATGTAGCTCAGTGGCAGAGCGCATGCT < 41bp 1 0.695594207626385 1 0.215543299913406 experiment 0.608811584747229 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424522 chr12:125424530 . . 0 29 hm5C_associated_SNPs_10137 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424530 125424530 1 + T C rs140737361 125424524 + 125424504 125424544 41 AAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTT AAGGGGTAGGGGATGTAGCTCAGTGGCAGAGCGCATGCTTT < 41bp 1 0.589702547868333 1 0.420758605003357 experiment 0.820594904263333 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424524 chr12:125424530 . . 0 27 hm5C_associated_SNPs_10138 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424530 125424530 1 + T C rs140737361 125424535 + 125424515 125424555 41 GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAG GATGTAGCTCAGTGGCAGAGCGCATGCTTTGCACGTATGAG < 41bp 1 0.324804130866617 1 0.145445108413696 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424535 chr12:125424530 . . 0 16 hm5C_associated_SNPs_10139 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424530 125424530 1 + T C rs140737361 125424537 + 125424517 125424557 41 TGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGC TGTAGCTCAGTGGCAGAGCGCATGCTTTGCACGTATGAGGC < 41bp 1 0.32987980061504 1 0.275123059749603 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424537 chr12:125424530 . . 0 14 hm5C_associated_SNPs_10140 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424530 125424530 1 + T C rs140737361 125424541 + 125424521 125424561 41 GCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCG GCTCAGTGGCAGAGCGCATGCTTTGCACGTATGAGGCCCCG < 41bp 1 0.359770948719966 1 0.0302781760692596 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424541 chr12:125424530 . . 0 10 hm5C_associated_SNPs_10141 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424530 125424530 1 + T C rs140737361 125424548 + 125424528 125424568 41 GGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTCAA GGCAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTCAA < 41bp 1 0.365628987370297 1 0.0634249150753021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424548 chr12:125424530 . . 0 3 hm5C_associated_SNPs_10142 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424540 125424540 1 + G A rs536348255 125424522 + 125424502 125424542 41 ACAAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATGCT ACAAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATACT < 41bp 1 0.65751621900956 1 0.131622314453125 experiment 0.684967561980879 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424522 chr12:125424540 . . 0 39 hm5C_associated_SNPs_10143 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424524 + 125424504 125424544 41 AAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATGCTTT AAGGGGTAGGGGATGTAGCTCAGTGGTAGAGCGCATACTTT < 41bp 1 0.613190133327446 1 0.46743369102478 experiment 0.773619733345108 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424524 chr12:125424540 . . 0 37 hm5C_associated_SNPs_10144 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424535 + 125424515 125424555 41 GATGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAG GATGTAGCTCAGTGGTAGAGCGCATACTTTGCACGTATGAG < 41bp 1 0.270190934505343 1 0.223791688680649 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424535 chr12:125424540 . . 0 26 hm5C_associated_SNPs_10145 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424537 + 125424517 125424557 41 TGTAGCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGC TGTAGCTCAGTGGTAGAGCGCATACTTTGCACGTATGAGGC < 41bp 1 0.141124592633628 1 0.168158531188965 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424537 chr12:125424540 . . 0 24 hm5C_associated_SNPs_10146 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424541 + 125424521 125424561 41 GCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCG GCTCAGTGGTAGAGCGCATACTTTGCACGTATGAGGCCCCG < 41bp 1 0.384319168536328 1 0.040247917175293 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424541 chr12:125424540 . . 0 20 hm5C_associated_SNPs_10147 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424546 + 125424526 125424566 41 GTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTC GTGGTAGAGCGCATACTTTGCACGTATGAGGCCCCGGGTTC < 41bp 1 0.790731037449737 1 0.451573550701141 experiment 0.418537925100527 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424546 chr12:125424540 . . 0 15 hm5C_associated_SNPs_10148 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424548 + 125424528 125424568 41 GGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTCAA GGTAGAGCGCATACTTTGCACGTATGAGGCCCCGGGTTCAA < 41bp 1 0.329865159170334 1 0.0657710134983063 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424548 chr12:125424540 . . 0 13 hm5C_associated_SNPs_10149 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424557 + 125424537 125424577 41 CATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCA CATACTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCA < 41bp 1 0.46296268328175 1 0.0895251929759979 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424557 chr12:125424540 . . 0 4 hm5C_associated_SNPs_10150 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424558 + 125424538 125424578 41 ATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCAT ATACTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCAT < 41bp 1 0.627341018430079 1 0.417722642421722 experiment 0.745317963139841 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424558 chr12:125424540 . . 0 3 hm5C_associated_SNPs_10151 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424559 + 125424539 125424579 41 TGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATC TACTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATC < 41bp 1 0.444415201988961 1 0.472037583589554 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424559 chr12:125424540 . . 0 2 hm5C_associated_SNPs_10152 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424540 125424540 1 + G A rs536348255 125424560 + 125424540 125424580 41 GCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATCT ACTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATCT < 41bp 1 0.701874207970037 1 0.645920157432556 experiment 0.596251584059926 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424560 chr12:125424540 . . 0 1 hm5C_associated_SNPs_10153 0 0 118 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:125424536-125424556
64251 chr12 125424560 125424560 1 + C A rs184562645 125424541 + 125424521 125424561 41 GCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCG GCTCAGTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCAG < 41bp 1 0.376524347576125 1 0.0402990281581879 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424541 chr12:125424560 . . 0 40 hm5C_associated_SNPs_10154 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424546 + 125424526 125424566 41 GTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTC GTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCAGGGTTC < 41bp 1 0.754632780522544 1 0.300265729427338 experiment 0.490734438954911 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424546 chr12:125424560 . . 0 35 hm5C_associated_SNPs_10155 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424548 + 125424528 125424568 41 GGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTCAA GGTAGAGCGCATGCTTTGCACGTATGAGGCCCAGGGTTCAA < 41bp 1 0.406109757683094 1 0.0434449017047882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424548 chr12:125424560 . . 0 33 hm5C_associated_SNPs_10156 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424557 + 125424537 125424577 41 CATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCA CATGCTTTGCACGTATGAGGCCCAGGGTTCAATCCCCGGCA < 41bp 1 0.424801742169186 1 0.116198778152466 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424557 chr12:125424560 . . 0 24 hm5C_associated_SNPs_10157 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424558 + 125424538 125424578 41 ATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCAT ATGCTTTGCACGTATGAGGCCCAGGGTTCAATCCCCGGCAT < 41bp 1 0.591273345796154 1 0.497740238904953 experiment 0.817453308407692 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424558 chr12:125424560 . . 0 23 hm5C_associated_SNPs_10158 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424559 + 125424539 125424579 41 TGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATC TGCTTTGCACGTATGAGGCCCAGGGTTCAATCCCCGGCATC < 41bp 1 0.729673389704093 1 0.765776097774506 experiment 0.540653220591814 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424559 chr12:125424560 . . 0 22 hm5C_associated_SNPs_10159 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424566 + 125424546 125424586 41 CACGTATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGAC CACGTATGAGGCCCAGGGTTCAATCCCCGGCATCTCCAGAC < 41bp 1 0.129721487809496 1 0.0603587627410889 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424566 chr12:125424560 . . 0 15 hm5C_associated_SNPs_10160 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424570 + 125424550 125424590 41 TATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTT TATGAGGCCCAGGGTTCAATCCCCGGCATCTCCAGACTTTT < 41bp 1 0.458391695111534 1 0.077065110206604 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424570 chr12:125424560 . . 0 11 hm5C_associated_SNPs_10161 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424571 + 125424551 125424591 41 ATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTC ATGAGGCCCAGGGTTCAATCCCCGGCATCTCCAGACTTTTC < 41bp 1 0.467971781859724 1 0.53925347328186 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424571 chr12:125424560 . . 0 10 hm5C_associated_SNPs_10162 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424572 + 125424552 125424592 41 TGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTCC TGAGGCCCAGGGTTCAATCCCCGGCATCTCCAGACTTTTCC < 41bp 1 0.356887826122136 1 0.0961488485336304 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424572 chr12:125424560 . . 0 9 hm5C_associated_SNPs_10163 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424576 + 125424556 125424596 41 GCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCT GCCCAGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCT < 41bp 1 0.126887909373167 1 0.0809346437454224 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424576 chr12:125424560 . . 0 5 hm5C_associated_SNPs_10164 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424560 125424560 1 + C A rs184562645 125424579 + 125424559 125424599 41 CCGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCTTTT CAGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCTTTT < 41bp 1 0.568018843913301 1 0.454997181892395 experiment 0.863962312173399 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424579 chr12:125424560 . . 0 2 hm5C_associated_SNPs_10165 0 0 108 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:125424500-125424560
64251 chr12 125424566 125424566 1 + C T rs112048799 125424546 + 125424526 125424566 41 GTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTC GTGGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTT < 41bp 1 0.757798829064275 1 0.427982568740845 experiment 0.48440234187145 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424546 chr12:125424566 . . 0 41 hm5C_associated_SNPs_10166 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424548 + 125424528 125424568 41 GGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTCAA GGTAGAGCGCATGCTTTGCACGTATGAGGCCCCGGGTTTAA < 41bp 1 0.390049540950405 1 0.0737228095531464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424548 chr12:125424566 . . 0 39 hm5C_associated_SNPs_10167 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424557 + 125424537 125424577 41 CATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCA CATGCTTTGCACGTATGAGGCCCCGGGTTTAATCCCCGGCA < 41bp 1 0.432191396938608 1 0.103576630353928 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424557 chr12:125424566 . . 0 30 hm5C_associated_SNPs_10168 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424558 + 125424538 125424578 41 ATGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCAT ATGCTTTGCACGTATGAGGCCCCGGGTTTAATCCCCGGCAT < 41bp 1 0.623326843130163 1 0.750597596168518 experiment 0.753346313739673 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424558 chr12:125424566 . . 0 29 hm5C_associated_SNPs_10169 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424559 + 125424539 125424579 41 TGCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATC TGCTTTGCACGTATGAGGCCCCGGGTTTAATCCCCGGCATC < 41bp 1 0.447355116265246 1 0.685613393783569 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424559 chr12:125424566 . . 0 28 hm5C_associated_SNPs_10170 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424560 + 125424540 125424580 41 GCTTTGCACGTATGAGGCCCCGGGTTCAATCCCCGGCATCT GCTTTGCACGTATGAGGCCCCGGGTTTAATCCCCGGCATCT < 41bp 1 0.769568310708727 1 0.70330798625946 experiment 0.460863378582546 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424560 chr12:125424566 . . 0 27 hm5C_associated_SNPs_10171 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424570 + 125424550 125424590 41 TATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTT TATGAGGCCCCGGGTTTAATCCCCGGCATCTCCAGACTTTT < 41bp 1 0.502371876293404 1 0.194154024124146 experiment 0.995256247413193 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424570 chr12:125424566 . . 0 17 hm5C_associated_SNPs_10172 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424571 + 125424551 125424591 41 ATGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTC ATGAGGCCCCGGGTTTAATCCCCGGCATCTCCAGACTTTTC < 41bp 1 0.530757694551209 1 0.596005976200104 experiment 0.938484610897582 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424571 chr12:125424566 . . 0 16 hm5C_associated_SNPs_10173 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424572 + 125424552 125424592 41 TGAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTCC TGAGGCCCCGGGTTTAATCCCCGGCATCTCCAGACTTTTCC < 41bp 1 0.358941613646394 1 0.174361735582352 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424572 chr12:125424566 . . 0 15 hm5C_associated_SNPs_10174 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424573 + 125424553 125424593 41 GAGGCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTCCG GAGGCCCCGGGTTTAATCCCCGGCATCTCCAGACTTTTCCG < 41bp 1 0.778198681621835 1 0.520296096801758 experiment 0.44360263675633 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424573 chr12:125424566 . . 0 14 hm5C_associated_SNPs_10175 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424576 + 125424556 125424596 41 GCCCCGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCT GCCCCGGGTTTAATCCCCGGCATCTCCAGACTTTTCCGCCT < 41bp 1 0.111055423327203 1 0.106189787387848 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424576 chr12:125424566 . . 0 11 hm5C_associated_SNPs_10176 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424579 + 125424559 125424599 41 CCGGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCTTTT CCGGGTTTAATCCCCGGCATCTCCAGACTTTTCCGCCTTTT < 41bp 1 0.641598130973821 1 0.650474905967712 experiment 0.716803738052359 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424579 chr12:125424566 . . 0 8 hm5C_associated_SNPs_10177 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424581 + 125424561 125424601 41 GGGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCTTTTTC GGGTTTAATCCCCGGCATCTCCAGACTTTTCCGCCTTTTTC < 41bp 1 0.599689625088258 1 0.127560436725616 experiment 0.800620749823484 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424581 chr12:125424566 . . 0 6 hm5C_associated_SNPs_10178 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125424566 125424566 1 + C T rs112048799 125424582 + 125424562 125424602 41 GGTTCAATCCCCGGCATCTCCAGACTTTTCCGCCTTTTTCG GGTTTAATCCCCGGCATCTCCAGACTTTTCCGCCTTTTTCG < 41bp 1 0.500856676096094 1 0.544067442417145 experiment 0.998286647807813 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR5188;DHX37 ENSG00000241129;ENSG00000150990 intergenic Human other chr12:125424582 chr12:125424566 . . 0 5 hm5C_associated_SNPs_10179 0 0 57 SSB POSTAR2 GSE95683,GSM2521599 chr12:125424500-125424580
64251 chr12 125478307 125478307 1 + C T rs11549741 125478312 + 125478292 125478332 41 ACGGCCCTCACCCCGCATCGCGACCCCGCGCCCCGCCGGCC ACGGCCCTCACCCCGTATCGCGACCCCGCGCCCCGCCGGCC < 41bp 1 0.648397139256089 1 0.250308573246002 experiment 0.703205721487822 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478312 chr12:125478307 . . 0 16 hm5C_associated_SNPs_10180 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478315 + 125478295 125478335 41 GCCCTCACCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAG GCCCTCACCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAG < 41bp 1 0.484618962833167 1 0.23098435997963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478315 chr12:125478307 . . 0 13 hm5C_associated_SNPs_10181 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478316 + 125478296 125478336 41 CCCTCACCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGC CCCTCACCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGC < 41bp 1 0.498633117084488 1 0.471393883228302 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478316 chr12:125478307 . . 0 12 hm5C_associated_SNPs_10182 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478317 + 125478297 125478337 41 CCTCACCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCA CCTCACCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCA < 41bp 1 0.681543393821606 1 0.661713242530823 experiment 0.636913212356788 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478317 chr12:125478307 . . 0 11 hm5C_associated_SNPs_10183 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478318 + 125478298 125478338 41 CTCACCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCAT CTCACCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCAT < 41bp 1 0.727479538261699 1 0.747816503047943 experiment 0.545040923476602 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478318 chr12:125478307 . . 0 10 hm5C_associated_SNPs_10184 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478320 + 125478300 125478340 41 CACCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCATGG CACCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCATGG < 41bp 1 0.565024867676666 1 0.103991329669952 experiment 0.869950264646667 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478320 chr12:125478307 . . 0 8 hm5C_associated_SNPs_10185 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478322 + 125478302 125478342 41 CCCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGC CCCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGC < 41bp 1 0.579502516279088 1 0.100876241922379 experiment 0.840994967441823 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478322 chr12:125478307 . . 0 6 hm5C_associated_SNPs_10186 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478323 + 125478303 125478343 41 CCCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCG CCCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCG < 41bp 1 0.436672576212818 1 0.108059287071228 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478323 chr12:125478307 . . 0 5 hm5C_associated_SNPs_10187 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478324 + 125478304 125478344 41 CCGCATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCGC CCGTATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCGC < 41bp 1 0.681507030659949 1 0.667232036590576 experiment 0.636985938680101 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478324 chr12:125478307 . . 0 4 hm5C_associated_SNPs_10188 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125478307 125478307 1 + C T rs11549741 125478325 + 125478305 125478345 41 CGCATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCGCG CGTATCGCGACCCCGCGCCCCGCCGGCCGAGCATGGGCGCG < 41bp 1 0.739420158704632 1 0.132250130176544 experiment 0.521159682590735 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRI3BP ENSG00000184992 UTR5 Human protein_coding chr12:125478325 chr12:125478307 . . 0 3 hm5C_associated_SNPs_10189 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:125478200-125478320
64251 chr12 125550046 125550046 1 + C T rs543952183 125550062 + 125550042 125550082 41 CTTCCTCCGGTCCCAGGTCCCCGGCCCTCGCCTCAGCCCCG CTTCTTCCGGTCCCAGGTCCCCGGCCCTCGCCTCAGCCCCG < 41bp 1 0.567463317798726 1 0.81040221452713 experiment 0.865073364402548 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AACS ENSG00000081760 UTR5 Human protein_coding chr12:125550062 chr12:125550046 . . 0 5 hm5C_associated_SNPs_10190 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:125550046-125550047
64251 chr12 125603223 125603223 1 + C T rs138543814 125603220 + 125603200 125603240 41 TGTGGAACTGGATGGTGTCCCTTCTGGCCACAGGAGCGGCC TGTGGAACTGGATGGTGTCCCTTTTGGCCACAGGAGCGGCC < 41bp 1 0.154496453845377 1 0.0614384710788727 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AACS ENSG00000081760 CDS Human protein_coding chr12:125603220 chr12:125603223 synonymous SNV . 0 24 hm5C_associated_SNPs_10191 0 0 1 RPS3 POSTAR2 ENCODE chr12:125603214-125603295
64251 chr12 125626785 125626785 1 + G C rs3751179 125626799 + 125626779 125626819 41 AGACTGGCTGGCGTGTCACTCAGCCGCACCCGTGTGCACTG AGACTGCCTGGCGTGTCACTCAGCCGCACCCGTGTGCACTG < 41bp 1 0.550046169813251 1 0.735016107559204 experiment 0.899907660373499 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AACS ENSG00000081760 UTR3 Human protein_coding chr12:125626799 chr12:125626785 . . 0 7 hm5C_associated_SNPs_10192 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr12:125626758-125626793
64251 chr12 131488789 131488789 1 + G A rs73473278 131488788 + 131488768 131488808 41 TTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA TTCCTCCCATTACCGCTTCCCAGCCCACGGGCAGAGCTTCA < 41bp 1 0.188535365904316 1 0.381116330623627 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488788 chr12:131488789 synonymous SNV . 0 22 hm5C_associated_SNPs_10194 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488789 131488789 1 + G A rs73473278 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTCCCATTACCGCTTCCCAGCCCACGGGCAGAGCTTCATCC < 41bp 1 0.0627866144322483 1 0.104543805122375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488789 synonymous SNV . 0 19 hm5C_associated_SNPs_10195 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488789 131488789 1 + G A rs73473278 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TCCCATTACCGCTTCCCAGCCCACGGGCAGAGCTTCATCCA < 41bp 1 0.290569267075388 1 0.664961218833923 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488789 synonymous SNV . 0 18 hm5C_associated_SNPs_10196 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488789 131488789 1 + G A rs73473278 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG CCCATTACCGCTTCCCAGCCCACGGGCAGAGCTTCATCCAG < 41bp 1 0.71465886434251 1 0.844064116477966 experiment 0.57068227131498 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488789 synonymous SNV . 0 17 hm5C_associated_SNPs_10197 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488789 131488789 1 + G A rs73473278 131488795 + 131488775 131488815 41 CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGAT CATTACCGCTTCCCAGCCCACGGGCAGAGCTTCATCCAGAT < 41bp 1 0.522529904403855 1 0.931143760681152 experiment 0.95494019119229 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488795 chr12:131488789 synonymous SNV . 0 15 hm5C_associated_SNPs_10198 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488789 131488789 1 + G A rs73473278 131488799 + 131488779 131488819 41 ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCC ACCGCTTCCCAGCCCACGGGCAGAGCTTCATCCAGATCCCC < 41bp 1 0.301140948495818 1 0.260250568389893 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488799 chr12:131488789 synonymous SNV . 0 11 hm5C_associated_SNPs_10199 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131623959 131623959 1 + T C rs568703835 131623966 + 131623946 131623986 41 TCCCCTGTGACTCTGGCTGTCGGAGCACACTGCTCAGCCCA TCCCCTGTGACTCCGGCTGTCGGAGCACACTGCTCAGCCCA < 41bp 1 0.746963288672954 1 0.955317735671997 experiment 0.506073422654092 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131623966 chr12:131623959 . . 0 14 hm5C_associated_SNPs_10200 0 0 1 UPF1 POSTAR2 ENCODE chr12:131623915-131623968
64251 chr12 131625549 131625549 1 + G T rs73149940 131625559 + 131625539 131625579 41 ACTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATG ACTGCCCCAGTCTCCCGTGACCCCAGAAACCAGGTCACATG < 41bp 1 0.411894367735673 1 0.0663086771965027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625559 chr12:131625549 . . 0 11 hm5C_associated_SNPs_10201 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 131625549 131625549 1 + G T rs73149940 131625560 + 131625540 131625580 41 CTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATGG CTGCCCCAGTCTCCCGTGACCCCAGAAACCAGGTCACATGG < 41bp 1 0.365644302138 1 0.315512478351593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625560 chr12:131625549 . . 0 10 hm5C_associated_SNPs_10202 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 131625552 131625552 1 + C A rs185274113 131625559 + 131625539 131625579 41 ACTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATG ACTGCCCCAGGCTACCGTGACCCCAGAAACCAGGTCACATG < 41bp 1 0.447441959998311 1 0.041399747133255 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625559 chr12:131625552 . . 0 14 hm5C_associated_SNPs_10203 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 131625552 131625552 1 + C A rs185274113 131625560 + 131625540 131625580 41 CTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATGG CTGCCCCAGGCTACCGTGACCCCAGAAACCAGGTCACATGG < 41bp 1 0.377888763654885 1 0.187328904867172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625560 chr12:131625552 . . 0 13 hm5C_associated_SNPs_10204 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 131625577 131625577 1 + A G rs77522954 131625559 + 131625539 131625579 41 ACTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATG ACTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACGTG < 41bp 1 0.463864225543603 1 0.0823777318000793 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625559 chr12:131625577 . . 0 39 hm5C_associated_SNPs_10205 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 131625577 131625577 1 + A G rs77522954 131625560 + 131625540 131625580 41 CTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACATGG CTGCCCCAGGCTCCCGTGACCCCAGAAACCAGGTCACGTGG < 41bp 1 0.399061363484296 1 0.462578773498535 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 UTR3 Human protein_coding chr12:131625560 chr12:131625577 . . 0 38 hm5C_associated_SNPs_10206 0 0 1 EIF3H POSTAR2 ENCODE chr12:131625526-131625588
64251 chr12 132262713 132262713 1 + C T rs79031981 132262709 + 132262689 132262729 41 CTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAA CTTCGAGCAAAAGCAAAGATCCACTGAGAGAAGAAGAGAAA < 41bp 1 0.121606577315703 1 0.146758675575256 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132262709 chr12:132262713 nonsynonymous SNV 0.462 3 25 hm5C_associated_SNPs_10207 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:132262700-132262720
64251 chr12 132325376 132325376 1 + C T rs34515698 132325361 + 132325341 132325381 41 CACCACACCGCCGGGGACACCCACTTTGACGATGACGAGGC CACCACACCGCCGGGGACACCCACTTTGACGATGATGAGGC < 41bp 1 0.184517673549786 1 0.131160825490952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325361 chr12:132325376 synonymous SNV . 0 36 hm5C_associated_SNPs_10209 0 0 1 DDX24 POSTAR2 ENCODE chr12:132325361-132325402
64251 chr12 132464251 132464251 1 + G A rs147304028 132464239 + 132464219 132464259 41 TTTTTCATCTTTTTTCCCAGCAGCAAGCCCTCGCAGGGAGC TTTTTCATCTTTTTTCCCAGCAGCAAGCCCTCACAGGGAGC < 41bp 1 0.224727944902723 1 0.28991025686264 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132464239 chr12:132464251 nonsynonymous SNV 0.433 1 33 hm5C_associated_SNPs_10219 0 0 17 DDX24 POSTAR2 ENCODE chr12:132464241-132464286
64251 chr12 132562080 132562080 1 + G A rs117244926 132562071 + 132562051 132562091 41 ATTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGCTCCA ATTCAGCAGCAGGTGGTGACCACGGCGTCAGCCCCGCTCCA < 41bp 1 0.723574910870453 1 0.910797715187073 experiment 0.552850178259094 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132562071 chr12:132562080 synonymous SNV . 0 30 hm5C_associated_SNPs_10224 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132562071-132562096
64251 chr12 132562086 132562086 1 + G A rs187160839 132562071 + 132562051 132562091 41 ATTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGCTCCA ATTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCACTCCA < 41bp 1 0.693422359090618 1 0.895921349525452 experiment 0.613155281818763 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132562071 chr12:132562086 synonymous SNV . 0 36 hm5C_associated_SNPs_10225 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132562071-132562096
64251 chr12 132588997 132588997 1 + T A rs540126078 132588993 + 132588973 132589013 41 GCAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCC GCAGAATGTGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCC < 41bp 1 0.578184546071218 1 0.210799872875214 experiment 0.843630907857564 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588993 chr12:132588997 synonymous SNV . 0 25 hm5C_associated_SNPs_10226 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132588994 + 132588974 132589014 41 CAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCT CAGAATGTGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCCT < 41bp 1 0.342111284468457 1 0.171661794185638 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588994 chr12:132588997 synonymous SNV . 0 24 hm5C_associated_SNPs_10227 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132588995 + 132588975 132589015 41 AGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTC AGAATGTGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCCTC < 41bp 1 0.504902680208996 1 0.505067229270935 experiment 0.990194639582009 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588995 chr12:132588997 synonymous SNV . 0 23 hm5C_associated_SNPs_10228 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132588996 + 132588976 132589016 41 GAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCT GAATGTGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCCTCT < 41bp 1 0.545569888352382 1 0.745689511299133 experiment 0.908860223295235 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588996 chr12:132588997 synonymous SNV . 0 22 hm5C_associated_SNPs_10229 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132589000 + 132588980 132589020 41 GTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAG GTGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCCTCTGCAG < 41bp 1 0.285628210252528 1 0.213911533355713 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589000 chr12:132588997 synonymous SNV . 0 18 hm5C_associated_SNPs_10230 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132589001 + 132588981 132589021 41 TGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGC TGCGTGCAGGTGCCCCAGGCCCTGGGCTGGGCCTCTGCAGC < 41bp 1 0.314669882322105 1 0.338723659515381 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589001 chr12:132588997 synonymous SNV . 0 17 hm5C_associated_SNPs_10231 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132588997 132588997 1 + T A rs540126078 132589007 + 132588987 132589027 41 CAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGCAGCAGC CAGGTGCCCCAGGCCCTGGGCTGGGCCTCTGCAGCAGCAGC < 41bp 1 0.587461156632765 1 0.604847311973572 experiment 0.825077686734471 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589007 chr12:132588997 synonymous SNV . 0 11 hm5C_associated_SNPs_10232 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589430 132589430 1 + G A rs148493427 132589422 + 132589402 132589442 41 GCCCCTGGGCTTCGAGAGGACGCCCGGCGTGCTGCTCCCCG GCCCCTGGGCTTCGAGAGGACGCCCGGCATGCTGCTCCCCG < 41bp 1 0.523315588991204 1 0.0606718063354492 experiment 0.953368822017592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589422 chr12:132589430 nonsynonymous SNV 0.156 0 29 hm5C_associated_SNPs_10233 0 0 1 RBM15 POSTAR2 ENCODE chr12:132589380-132589450
64251 chr13 21750806 21750806 1 + A G rs373866368 21750813 + 21750793 21750833 41 GTGCGCTTACGCCACGGCGTCTGCTGGCGGCCGCGGAGACG GTGCGCTTACGCCGCGGCGTCTGCTGGCGGCCGCGGAGACG < 41bp 1 0.645518789555483 1 0.198293656110764 experiment 0.708962420889034 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL57 ENSG00000173141 UTR5 Human protein_coding chr13:21750813 chr13:21750806 . . 0 14 hm5C_associated_SNPs_10242 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:21750789-21750808
64251 chr13 21750806 21750806 1 + A G rs373866368 21750820 + 21750800 21750840 41 TACGCCACGGCGTCTGCTGGCGGCCGCGGAGACGCAGAGTC TACGCCGCGGCGTCTGCTGGCGGCCGCGGAGACGCAGAGTC < 41bp 1 0.693763305543397 1 0.662363052368164 experiment 0.612473388913206 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL57 ENSG00000173141 UTR5 Human protein_coding chr13:21750820 chr13:21750806 . . 0 7 hm5C_associated_SNPs_10243 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:21750789-21750808
64251 chr13 21750806 21750806 1 + A G rs373866368 21750824 + 21750804 21750844 41 CCACGGCGTCTGCTGGCGGCCGCGGAGACGCAGAGTCTTGA CCGCGGCGTCTGCTGGCGGCCGCGGAGACGCAGAGTCTTGA < 41bp 1 0.734586782438636 1 0.645645618438721 experiment 0.530826435122729 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL57 ENSG00000173141 UTR5 Human protein_coding chr13:21750824 chr13:21750806 . . 0 3 hm5C_associated_SNPs_10244 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:21750789-21750808
64251 chr13 27829212 27829212 1 + G A rs140626344 27829203 + 27829183 27829223 41 AATGTATCTTGGCACTCGAGCTTAATGATGACTGTTTTTTT AATGTATCTTGGCACTCGAGCTTAATGATAACTGTTTTTTT < 41bp 1 0.160791792754384 1 0.167199432849884 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD102 ENSG00000207500 ncRNA_exonic Human snoRNA chr13:27829203 chr13:27829212 . . 0 30 hm5C_associated_SNPs_10247 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:27829202-27829233
64251 chr13 27829212 27829212 1 + G A rs140626344 27829214 + 27829194 27829234 41 GCACTCGAGCTTAATGATGACTGTTTTTTTTGATTGCTTGA GCACTCGAGCTTAATGATAACTGTTTTTTTTGATTGCTTGA < 41bp 1 0.181305079971761 1 0.0567201673984528 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD102 ENSG00000207500 ncRNA_exonic Human snoRNA chr13:27829214 chr13:27829212 . . 0 19 hm5C_associated_SNPs_10248 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:27829202-27829233
64251 chr13 27998809 27998809 1 + C A rs571068536 27998804 + 27998784 27998824 41 GCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCCGGCACGTG GCAGGGAGCCGTGGGCCGGGCGCGCAGGTTCCCGGCACGTG < 41bp 1 0.795030047813406 1 0.440678149461746 experiment 0.409939904373188 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF3A ENSG00000122034 UTR5 Human protein_coding chr13:27998804 chr13:27998809 . 0.000 0 26 hm5C_associated_SNPs_10249 0 0 5 DDX3X POSTAR2 ENCODE chr13:27998769-27998839
64251 chr13 27998816 27998816 1 + C T rs185665072 27998804 + 27998784 27998824 41 GCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCCGGCACGTG GCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCTGGCACGTG < 41bp 1 0.771850325429699 1 0.339630305767059 experiment 0.456299349140602 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF3A ENSG00000122034 UTR5 Human protein_coding chr13:27998804 chr13:27998816 . 0.000 0 33 hm5C_associated_SNPs_10250 0 0 5 DDX3X POSTAR2 ENCODE chr13:27998769-27998839
64251 chr13 27998817 27998817 1 + G A rs553750244 27998804 + 27998784 27998824 41 GCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCCGGCACGTG GCAGGGAGCCGTGGGCCGGGCGCGCCGGTTCCCAGCACGTG < 41bp 1 0.765283029362528 1 0.351295113563538 experiment 0.469433941274944 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF3A ENSG00000122034 UTR5 Human protein_coding chr13:27998804 chr13:27998817 . . 0 34 hm5C_associated_SNPs_10251 0 0 5 DDX3X POSTAR2 ENCODE chr13:27998769-27998839
64251 chr13 33349341 33349341 1 + A C rs3492 33349340 + 33349320 33349360 41 CTTACTTTGGTGACCCCATACATTTGTGGTCACATGCTTTA CTTACTTTGGTGACCCCATACCTTTGTGGTCACATGCTTTA < 41bp 1 0.059708660807646 1 0.0602525472640991 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDS5B ENSG00000083642 UTR3 Human protein_coding chr13:33349340 chr13:33349341 . . 0 22 hm5C_associated_SNPs_10256 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:33349270-33349370
64251 chr13 41950104 41950104 1 + C T rs56724144 41950124 + 41950104 41950144 41 CATCAGTTTTAAAGTGTTAACTATATGTTAACAATATGGAG TATCAGTTTTAAAGTGTTAACTATATGTTAACAATATGGAG < 41bp 1 0.539011361770974 1 0.237141966819763 experiment 0.921977276458052 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAA16 ENSG00000172766 UTR3 Human protein_coding chr13:41950124 chr13:41950104 . . 0 1 hm5C_associated_SNPs_10259 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr13:41950083-41950109
64251 chr13 41950126 41950126 1 + A G rs73181107 41950124 + 41950104 41950144 41 CATCAGTTTTAAAGTGTTAACTATATGTTAACAATATGGAG CATCAGTTTTAAAGTGTTAACTGTATGTTAACAATATGGAG < 41bp 1 0.651739711579148 1 0.144104450941086 experiment 0.696520576841704 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAA16 ENSG00000172766 UTR3 Human protein_coding chr13:41950124 chr13:41950126 . . 0 23 hm5C_associated_SNPs_10260 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr13:41950111-41950137
64251 chr13 42887253 42887253 1 + C G rs61755977 42887264 + 42887244 42887284 41 TTATCCTTTCCAACATCAGACAGGTTGGTCCAGTCTAGAAA TTATCCTTTGCAACATCAGACAGGTTGGTCCAGTCTAGAAA < 41bp 1 0.397803189957827 1 0.45147317647934 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42887264 chr13:42887253 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_10261 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:42887234-42887258
64251 chr13 42887255 42887255 1 + A G rs61735444 42887264 + 42887244 42887284 41 TTATCCTTTCCAACATCAGACAGGTTGGTCCAGTCTAGAAA TTATCCTTTCCGACATCAGACAGGTTGGTCCAGTCTAGAAA < 41bp 1 0.439581787927054 1 0.340641021728516 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42887264 chr13:42887255 synonymous SNV . 0 12 hm5C_associated_SNPs_10262 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:42887234-42887258
64251 chr13 48611863 48611863 1 + G A rs368390627 48611874 + 48611854 48611894 41 CCGCTGCCAGGCGCGTCCTCCCGCGCGCTATGACGGCCAGC CCGCTGCCAAGCGCGTCCTCCCGCGCGCTATGACGGCCAGC < 41bp 1 0.628559768064594 1 0.535849213600159 experiment 0.742880463870813 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUDT15 ENSG00000136143;ENSG00000136159 UTR5 Human other chr13:48611874 chr13:48611863 . . 0 10 hm5C_associated_SNPs_10263 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr13:48611843-48611876
64251 chr13 48835585 48835585 1 + G A rs9332305 48835570 + 48835550 48835590 41 TTTTATATTTGAATTAGTAACTGTATGAAGTCATAGATAAT TTTTATATTTGAATTAGTAACTGTATGAAGTCATAAATAAT < 41bp 1 0.480951641735946 1 0.200155079364777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITM2B ENSG00000136156 UTR3 Human protein_coding chr13:48835570 chr13:48835585 . . 0 36 hm5C_associated_SNPs_10264 0 0 38 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:48835385-48836093
64251 chr13 50018738 50018738 1 + G C rs114928480 50018732 + 50018712 50018752 41 AAACGCCGCGGAGCCCTCGGCCGCCCGAGCAGGGGCTGGAC AAACGCCGCGGAGCCCTCGGCCGCCCCAGCAGGGGCTGGAC < 41bp 1 0.370415538344189 1 0.708746671676636 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SETDB2;SETDB2-PHF11 ENSG00000136169 UTR5 Human protein_coding chr13:50018732 chr13:50018738 . . 0 27 hm5C_associated_SNPs_10265 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr13:50018725-50018749
64251 chr13 52334973 52334973 1 + C T rs139158820 52334978 + 52334958 52334998 41 TGATCTGATGGGAGGCGGAGCCCAGGCAGTAACACTTGCTT TGATCTGATGGGAGGTGGAGCCCAGGCAGTAACACTTGCTT < 41bp 1 0.394841454642294 1 0.169510096311569 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 UTR3 Human protein_coding chr13:52334978 chr13:52334973 . . 0 16 hm5C_associated_SNPs_10266 0 0 1 RBFOX2 POSTAR2 ENCODE chr13:52334919-52334980
64251 chr13 77570078 77570078 1 + T G rs34481987 77570092 + 77570072 77570112 41 ATTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTT ATTAACGGGCAAGAACTACACAATGGAATGGTATGAACTTT < 41bp 1 0.555996047298502 1 0.283549875020981 experiment 0.888007905402995 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570092 chr13:77570078 synonymous SNV . 0 7 hm5C_associated_SNPs_10269 3 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:77570047-77570091
64251 chr13 93879770 93879770 1 + G T rs555690920 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCTCCGGGGCGGATGTGAAGGCTC < 41bp 1 0.638758362848136 1 0.873500227928162 experiment 0.722483274303728 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879770 nonsynonymous SNV 0.997 0 20 hm5C_associated_SNPs_10271 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr13 93879773 93879773 1 + G A rs150023233 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCGCCAGGGCGGATGTGAAGGCTC < 41bp 1 0.478046033146061 1 0.753415942192078 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879773 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_10272 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr13 96445982 96445982 1 + T C rs188102193 96445995 + 96445975 96446015 41 CAAAGTGTTGGGATTACAGGCGTGAGCCACTGCGCCTGGCC CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCC < 41bp 1 0.799607428641254 1 0.600262880325317 experiment 0.400785142717492 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96445995 chr13:96445982 . . 0 8 hm5C_associated_SNPs_10273 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 96445982 96445982 1 + T C rs188102193 96446001 + 96445981 96446021 41 GTTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGG GCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGG < 41bp 1 0.572235523203986 1 0.0821203589439392 experiment 0.855528953592027 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96446001 chr13:96445982 . . 0 2 hm5C_associated_SNPs_10274 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 96445982 96445982 1 + T C rs188102193 96446002 + 96445982 96446022 41 TTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGGT CTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGGT < 41bp 1 0.483688030270714 1 0.550463497638702 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96446002 chr13:96445982 . . 0 1 hm5C_associated_SNPs_10275 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 96445995 96445995 1 + C A rs532697934 96446001 + 96445981 96446021 41 GTTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGG GTTGGGATTACAGGAGTGAGCCACTGCGCCTGGCCATCAGG < 41bp 1 0.559463053548967 1 0.0742360651493073 experiment 0.881073892902067 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96446001 chr13:96445995 . . 0 15 hm5C_associated_SNPs_10276 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 96445995 96445995 1 + C A rs532697934 96446002 + 96445982 96446022 41 TTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCATCAGGT TTGGGATTACAGGAGTGAGCCACTGCGCCTGGCCATCAGGT < 41bp 1 0.473719794266934 1 0.432509332895279 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNAJC3 ENSG00000102580 UTR3 Human protein_coding chr13:96446002 chr13:96445995 . . 0 14 hm5C_associated_SNPs_10277 0 0 1 LIN28B POSTAR2 ENCODE chr13:96445942-96446055
64251 chr13 97928615 97928615 1 + T C rs36010428 97928608 + 97928588 97928628 41 ATGCAAATTTGCTCATCCCCCCAAAAGTTGTCAGGTTGAAA ATGCAAATTTGCTCATCCCCCCAAAAGCTGTCAGGTTGAAA < 41bp 1 0.230893629327467 1 0.350593984127045 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MBNL2 ENSG00000139793 CDS Human protein_coding chr13:97928608 chr13:97928615 synonymous SNV . 0 28 hm5C_associated_SNPs_10278 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:97928595-97928633
64251 chr13 98674153 98674153 1 + T C rs78079018 98674170 + 98674150 98674190 41 TGTTTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCC TGTCTTTGAGCAAAAGAGATCGGTAGTGTTGTGTGTAGGCC < 41bp 1 0.577207313145945 1 0.404772222042084 experiment 0.845585373708111 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98674170 chr13:98674153 . . 0 4 hm5C_associated_SNPs_10279 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714641 chr13:98674104-98674156
64251 chr13 98675439 98675439 1 + C T rs79485876 98675445 + 98675425 98675465 41 TCAAATATATTTTACGTTTGCAGCACAACACCATTGCCCGG TCAAATATATTTTATGTTTGCAGCACAACACCATTGCCCGG < 41bp 1 0.792879336463481 1 0.336756259202957 experiment 0.414241327073038 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO5 ENSG00000065150 UTR3 Human protein_coding chr13:98675445 chr13:98675439 . . 0 15 hm5C_associated_SNPs_10280 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr13:98675410-98675440
64251 chr13 99098964 99098964 1 + C T rs61730897 99098975 + 99098955 99098995 41 CTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGA CTACTCGCTTACCATCCCCTCTGAGTCCGAGAACATCCAGA < 41bp 1 0.226094483127096 1 0.0672430396080017 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098975 chr13:99098964 synonymous SNV . 0 10 hm5C_associated_SNPs_10281 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr13 99098964 99098964 1 + C T rs61730897 99098981 + 99098961 99099001 41 GCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACT GCTTACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACT < 41bp 1 0.158904159121107 1 0.635285198688507 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098981 chr13:99098964 synonymous SNV . 0 4 hm5C_associated_SNPs_10282 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr13 99858020 99858020 1 + C T rs371286261 99858023 + 99858003 99858043 41 GATCGCCAGAGTTGATTCGGCTGATCTGGCTGGCTAGGCGG GATCGCCAGAGTTGATTTGGCTGATCTGGCTGGCTAGGCGG < 41bp 1 0.350319309469514 1 0.0824285745620728 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858023 chr13:99858020 . . 0 18 hm5C_associated_SNPs_10283 0 0 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:99857980-99858020
64251 chr13 99858020 99858020 1 + C T rs371286261 99858028 + 99858008 99858048 41 CCAGAGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTC CCAGAGTTGATTTGGCTGATCTGGCTGGCTAGGCGGGTGTC < 41bp 1 0.343567775156963 1 0.236833065748215 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858028 chr13:99858020 . . 0 13 hm5C_associated_SNPs_10284 0 0 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:99857980-99858020
64251 chr13 99858020 99858020 1 + C T rs371286261 99858032 + 99858012 99858052 41 AGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCT AGTTGATTTGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCT < 41bp 1 0.407140424310809 1 0.76171213388443 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858032 chr13:99858020 . . 0 9 hm5C_associated_SNPs_10285 0 0 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:99857980-99858020
64251 chr13 99858020 99858020 1 + C T rs371286261 99858036 + 99858016 99858056 41 GATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCT GATTTGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCT < 41bp 1 0.504988912563655 1 0.424063354730606 experiment 0.990022174872689 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858036 chr13:99858020 . . 0 5 hm5C_associated_SNPs_10286 0 0 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:99857980-99858020
64251 chr13 99858046 99858046 1 + G A rs555309472 99858028 + 99858008 99858048 41 CCAGAGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTC CCAGAGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTATC < 41bp 1 0.335189914539567 1 0.165576159954071 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858028 chr13:99858046 . . 0 39 hm5C_associated_SNPs_10287 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858032 + 99858012 99858052 41 AGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCT AGTTGATTCGGCTGATCTGGCTGGCTAGGCGGGTATCCCCT < 41bp 1 0.403272012858376 1 0.71356999874115 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858032 chr13:99858046 . . 0 35 hm5C_associated_SNPs_10288 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858036 + 99858016 99858056 41 GATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCT GATTCGGCTGATCTGGCTGGCTAGGCGGGTATCCCCTTCCT < 41bp 1 0.575977548825766 1 0.358188927173615 experiment 0.848044902348468 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858036 chr13:99858046 . . 0 31 hm5C_associated_SNPs_10289 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858041 + 99858021 99858061 41 GGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTC GGCTGATCTGGCTGGCTAGGCGGGTATCCCCTTCCTCCCTC < 41bp 1 0.711503405515025 1 0.805212736129761 experiment 0.576993188969949 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858041 chr13:99858046 . . 0 26 hm5C_associated_SNPs_10290 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858048 + 99858028 99858068 41 CTGGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTC CTGGCTGGCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTC < 41bp 1 0.208114771709143 1 0.0229906737804413 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858048 chr13:99858046 . . 0 19 hm5C_associated_SNPs_10291 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858049 + 99858029 99858069 41 TGGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCC TGGCTGGCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTCC < 41bp 1 0.0718417248198117 1 0.024636447429657 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858049 chr13:99858046 . . 0 18 hm5C_associated_SNPs_10292 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858050 + 99858030 99858070 41 GGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCA GGCTGGCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTCCA < 41bp 1 0.0273707366169604 1 0.0368922352790833 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858050 chr13:99858046 . . 0 17 hm5C_associated_SNPs_10293 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858051 + 99858031 99858071 41 GCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCAT GCTGGCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTCCAT < 41bp 1 0.0989960928360136 1 0.0733600854873657 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858051 chr13:99858046 . . 0 16 hm5C_associated_SNPs_10294 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858054 + 99858034 99858074 41 GGCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTG GGCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTCCATGTG < 41bp 1 0.0270022208305621 1 0.196986734867096 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858054 chr13:99858046 . . 0 13 hm5C_associated_SNPs_10295 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858055 + 99858035 99858075 41 GCTAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTGC GCTAGGCGGGTATCCCCTTCCTCCCTCACCGTTCCATGTGC < 41bp 1 0.238180614529389 1 0.763979136943817 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858055 chr13:99858046 . . 0 12 hm5C_associated_SNPs_10296 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858057 + 99858037 99858077 41 TAGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGT TAGGCGGGTATCCCCTTCCTCCCTCACCGTTCCATGTGCGT < 41bp 1 0.0243708250603468 1 0.0741312205791473 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858057 chr13:99858046 . . 0 10 hm5C_associated_SNPs_10297 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858058 + 99858038 99858078 41 AGGCGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGTC AGGCGGGTATCCCCTTCCTCCCTCACCGTTCCATGTGCGTC < 41bp 1 0.0677541728543597 1 0.0458369851112366 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858058 chr13:99858046 . . 0 9 hm5C_associated_SNPs_10298 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858059 + 99858039 99858079 41 GGCGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGTCC GGCGGGTATCCCCTTCCTCCCTCACCGTTCCATGTGCGTCC < 41bp 1 0.0939136706441431 1 0.0660565495491028 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858059 chr13:99858046 . . 0 8 hm5C_associated_SNPs_10299 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858061 + 99858041 99858081 41 CGGGTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCT CGGGTATCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCT < 41bp 1 0.266713194540398 1 0.429829329252243 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858061 chr13:99858046 . . 0 6 hm5C_associated_SNPs_10300 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858063 + 99858043 99858083 41 GGTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCTCC GGTATCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCTCC < 41bp 1 0.0656934148423002 1 0.159042060375214 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858063 chr13:99858046 . . 0 4 hm5C_associated_SNPs_10301 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858046 99858046 1 + G A rs555309472 99858064 + 99858044 99858084 41 GTGTCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCTCCC GTATCCCCTTCCTCCCTCACCGTTCCATGTGCGTCCCTCCC < 41bp 1 0.0297792016255691 1 0.187615215778351 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858064 chr13:99858046 . . 0 3 hm5C_associated_SNPs_10302 0 0 18 EIF3B POSTAR2 GSE65004,GSM1585668 chr13:99858016-99858066
64251 chr13 99858103 99858103 1 + G A rs71437997 99858083 + 99858063 99858103 41 CCGTTCCATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCG CCGTTCCATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCA < 41bp 1 0.308622438398537 1 0.87611335515976 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858083 chr13:99858103 . . 0 41 hm5C_associated_SNPs_10303 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858084 + 99858064 99858104 41 CGTTCCATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGA CGTTCCATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCAA < 41bp 1 0.592548716480328 1 0.69977879524231 experiment 0.814902567039345 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858084 chr13:99858103 . . 0 40 hm5C_associated_SNPs_10304 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858089 + 99858069 99858109 41 CATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGG CATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCAAAGAGG < 41bp 1 0.445202357658522 1 0.340895116329193 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858089 chr13:99858103 . . 0 35 hm5C_associated_SNPs_10305 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858092 + 99858072 99858112 41 GTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACG GTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCAAAGAGGACG < 41bp 1 0.124102025066052 1 0.0572750866413116 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858092 chr13:99858103 . . 0 32 hm5C_associated_SNPs_10306 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858096 + 99858076 99858116 41 GTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCA GTCCCTCCCGAAGCTGCGTGCTCGGTCAAAGAGGACGACCA < 41bp 1 0.469441623082268 1 0.764630556106567 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858096 chr13:99858103 . . 0 28 hm5C_associated_SNPs_10307 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858098 + 99858078 99858118 41 CCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCATC CCCTCCCGAAGCTGCGTGCTCGGTCAAAGAGGACGACCATC < 41bp 1 0.226513855418839 1 0.27543431520462 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858098 chr13:99858103 . . 0 26 hm5C_associated_SNPs_10308 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858102 + 99858082 99858122 41 CCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCATCCCCG CCCGAAGCTGCGTGCTCGGTCAAAGAGGACGACCATCCCCG < 41bp 1 0.373220479447811 1 0.674077153205872 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858102 chr13:99858103 . . 0 22 hm5C_associated_SNPs_10309 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858111 + 99858091 99858131 41 GCGTGCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAG GCGTGCTCGGTCAAAGAGGACGACCATCCCCGATAGAGGAG < 41bp 1 0.152248208816521 1 0.11791804432869 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858111 chr13:99858103 . . 0 13 hm5C_associated_SNPs_10310 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858114 + 99858094 99858134 41 TGCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGAC TGCTCGGTCAAAGAGGACGACCATCCCCGATAGAGGAGGAC < 41bp 1 0.010953820693113 1 0.12106716632843 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858114 chr13:99858103 . . 0 10 hm5C_associated_SNPs_10311 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858115 + 99858095 99858135 41 GCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACC GCTCGGTCAAAGAGGACGACCATCCCCGATAGAGGAGGACC < 41bp 1 0.0517104702241052 1 0.128856301307678 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858115 chr13:99858103 . . 0 9 hm5C_associated_SNPs_10312 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858118 + 99858098 99858138 41 CGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGT CGGTCAAAGAGGACGACCATCCCCGATAGAGGAGGACCGGT < 41bp 1 0.264440459109917 1 0.304452836513519 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858118 chr13:99858103 . . 0 6 hm5C_associated_SNPs_10313 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858119 + 99858099 99858139 41 GGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTC GGTCAAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTC < 41bp 1 0.610727497001714 1 0.513557255268097 experiment 0.778545005996573 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858119 chr13:99858103 . . 0 5 hm5C_associated_SNPs_10314 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858120 + 99858100 99858140 41 GTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCT GTCAAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCT < 41bp 1 0.274228353659278 1 0.324617326259613 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858120 chr13:99858103 . . 0 4 hm5C_associated_SNPs_10315 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858103 99858103 1 + G A rs71437997 99858121 + 99858101 99858141 41 TCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTT TCAAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTT < 41bp 1 0.50630125688946 1 0.450604975223541 experiment 0.98739748622108 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858121 chr13:99858103 . . 0 3 hm5C_associated_SNPs_10316 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:99858087-99858106
64251 chr13 99858111 99858111 1 + C T rs137933235 99858092 + 99858072 99858112 41 GTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACG GTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGATG < 41bp 1 0.125238798056361 1 0.0590564012527466 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858092 chr13:99858111 . . 0 40 hm5C_associated_SNPs_10317 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858096 + 99858076 99858116 41 GTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCA GTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGATGACCA < 41bp 1 0.415618513969267 1 0.475698798894882 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858096 chr13:99858111 . . 0 36 hm5C_associated_SNPs_10318 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858098 + 99858078 99858118 41 CCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCATC CCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGATGACCATC < 41bp 1 0.264125548363182 1 0.247154384851456 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858098 chr13:99858111 . . 0 34 hm5C_associated_SNPs_10319 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858102 + 99858082 99858122 41 CCCGAAGCTGCGTGCTCGGTCGAAGAGGACGACCATCCCCG CCCGAAGCTGCGTGCTCGGTCGAAGAGGATGACCATCCCCG < 41bp 1 0.397734180576725 1 0.805132031440735 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858102 chr13:99858111 . . 0 30 hm5C_associated_SNPs_10320 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858114 + 99858094 99858134 41 TGCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGAC TGCTCGGTCGAAGAGGATGACCATCCCCGATAGAGGAGGAC < 41bp 1 0.0179109233984096 1 0.0773991942405701 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858114 chr13:99858111 . . 0 18 hm5C_associated_SNPs_10321 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858115 + 99858095 99858135 41 GCTCGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACC GCTCGGTCGAAGAGGATGACCATCCCCGATAGAGGAGGACC < 41bp 1 0.0751679674541799 1 0.108453810214996 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858115 chr13:99858111 . . 0 17 hm5C_associated_SNPs_10322 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858118 + 99858098 99858138 41 CGGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGT CGGTCGAAGAGGATGACCATCCCCGATAGAGGAGGACCGGT < 41bp 1 0.257724244051899 1 0.180172741413116 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858118 chr13:99858111 . . 0 14 hm5C_associated_SNPs_10323 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858119 + 99858099 99858139 41 GGTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTC GGTCGAAGAGGATGACCATCCCCGATAGAGGAGGACCGGTC < 41bp 1 0.606573023867141 1 0.474958062171936 experiment 0.786853952265719 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858119 chr13:99858111 . . 0 13 hm5C_associated_SNPs_10324 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858120 + 99858100 99858140 41 GTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCT GTCGAAGAGGATGACCATCCCCGATAGAGGAGGACCGGTCT < 41bp 1 0.247514442954889 1 0.227528750896454 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858120 chr13:99858111 . . 0 12 hm5C_associated_SNPs_10325 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858111 99858111 1 + C T rs137933235 99858121 + 99858101 99858141 41 TCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTT TCGAAGAGGATGACCATCCCCGATAGAGGAGGACCGGTCTT < 41bp 1 0.49281934361569 1 0.39812359213829 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858121 chr13:99858111 . . 0 11 hm5C_associated_SNPs_10326 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858139 + 99858119 99858159 41 CCCGATAGAGGAGGACCGGTCTTTGGTCAAGGGTATACGAG CCCGATAGAGGAGGACCGGTCTTTGGTCAAGGGTATAGGAG < 41bp 1 0.0984740067509926 1 0.0653342306613922 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858139 chr13:99858156 . . 0 38 hm5C_associated_SNPs_10327 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858146 + 99858126 99858166 41 GAGGAGGACCGGTCTTTGGTCAAGGGTATACGAGTAGCTGC GAGGAGGACCGGTCTTTGGTCAAGGGTATAGGAGTAGCTGC < 41bp 1 0.641010627738112 1 0.952788889408112 experiment 0.717978744523776 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858146 chr13:99858156 . . 0 31 hm5C_associated_SNPs_10328 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858163 + 99858143 99858183 41 GGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACC GGTCAAGGGTATAGGAGTAGCTGCGCTCCCCTGCTAGAACC < 41bp 1 0.629374306133969 1 0.313692390918732 experiment 0.741251387732061 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858163 chr13:99858156 . . 0 14 hm5C_associated_SNPs_10329 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858166 + 99858146 99858186 41 CAAGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCC CAAGGGTATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCC < 41bp 1 0.0392209209569217 1 0.0925136804580688 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858166 chr13:99858156 . . 0 11 hm5C_associated_SNPs_10330 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858168 + 99858148 99858188 41 AGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAA AGGGTATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAA < 41bp 1 0.125417101667153 1 0.0918129980564117 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858168 chr13:99858156 . . 0 9 hm5C_associated_SNPs_10331 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858170 + 99858150 99858190 41 GGTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAAC GGTATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAAC < 41bp 1 0.126726750489965 1 0.259377956390381 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858170 chr13:99858156 . . 0 7 hm5C_associated_SNPs_10332 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858171 + 99858151 99858191 41 GTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACA GTATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACA < 41bp 1 0.0839134460701147 1 0.0664830505847931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858171 chr13:99858156 . . 0 6 hm5C_associated_SNPs_10333 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858172 + 99858152 99858192 41 TATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAA TATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAA < 41bp 1 0.0897062316640422 1 0.453904062509537 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858172 chr13:99858156 . . 0 5 hm5C_associated_SNPs_10334 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858173 + 99858153 99858193 41 ATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAG ATAGGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAG < 41bp 1 0.178976804963453 1 0.359268248081207 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858173 chr13:99858156 . . 0 4 hm5C_associated_SNPs_10335 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 99858156 99858156 1 + C G rs112488929 99858176 + 99858156 99858196 41 CGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTC GGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTC < 41bp 1 0.330871901350119 1 0.633020758628845 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control UBAC2 ENSG00000201793 ncRNA_exonic Human misc_RNA chr13:99858176 chr13:99858156 . . 0 1 hm5C_associated_SNPs_10336 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr13:99858093-99858177
64251 chr13 100038233 100038233 1 + A G rs1058083 100038232 + 100038212 100038252 41 TTAATTTTGCTCAGAGTATCCAGAGTTAGCCACTAGGCTGC TTAATTTTGCTCAGAGTATCCGGAGTTAGCCACTAGGCTGC < 41bp 1 0.750841900130673 1 0.91400671005249 experiment 0.498316199738655 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBAC2 ENSG00000134882 UTR3 Human protein_coding chr13:100038232 chr13:100038233 . . 0 22 hm5C_associated_SNPs_10342 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:100038222-100038243
64251 chr13 100920951 100920951 1 + T C rs143838146 100920958 + 100920938 100920978 41 TTCAGGTTCTAGGTGATAAACATGGGAATGCTTTATGGCTT TTCAGGTTCTAGGCGATAAACATGGGAATGCTTTATGGCTT < 41bp 1 0.500076257460304 1 0.340781539678574 experiment 0.999847485079391 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCCA ENSG00000175198 CDS Human protein_coding chr13:100920958 chr13:100920951 synonymous SNV . 0 14 hm5C_associated_SNPs_10343 1 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr13:100920938-100920959
64251 chr13 110959787 110959787 1 + A G rs35466678 110959786 + 110959766 110959806 41 CCGGCGCCCAGAGAGCCCAGCAAGGCCGGCCGCCCTGCCGG CCGGCGCCCAGAGAGCCCAGCGAGGCCGGCCGCCCTGCCGG < 41bp 1 0.691836090111128 1 0.877061486244202 experiment 0.616327819777744 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 UTR5 Human protein_coding chr13:110959786 chr13:110959787 . . 0 22 hm5C_associated_SNPs_10347 3 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr13:110959780-110959800
64251 chr13 111111173 111111173 1 + G A rs7990214 111111171 + 111111151 111111191 41 ACGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAG ACGAAGCTATCAAAGGTCTTCCAGGACTGCCAGGACCCAAG < 41bp 1 0.185326704785609 1 0.571271419525146 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111171 chr13:111111173 synonymous SNV . 0 23 hm5C_associated_SNPs_10348 1 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr13 111111173 111111173 1 + G A rs7990214 111111172 + 111111152 111111192 41 CGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAGG CGAAGCTATCAAAGGTCTTCCAGGACTGCCAGGACCCAAGG < 41bp 1 0.666985546879392 1 0.862051606178284 experiment 0.666028906241216 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111172 chr13:111111173 synonymous SNV . 0 22 hm5C_associated_SNPs_10349 1 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr13 111154061 111154061 1 + T C rs409858 111154069 + 111154049 111154089 41 GGGGTTCCCTGGTATCACACCCCCTTCCAACATCTCTGGGG GGGGTTCCCTGGCATCACACCCCCTTCCAACATCTCTGGGG < 41bp 1 0.0771503449081071 1 0.0681957900524139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111154069 chr13:111154061 synonymous SNV . 0 13 hm5C_associated_SNPs_10355 0 0 3 METTL3 POSTAR2 GSE46705,GSM1135012 chr13:111154060-111154085
64251 chr13 111154061 111154061 1 + T C rs409858 111154071 + 111154051 111154091 41 GGTTCCCTGGTATCACACCCCCTTCCAACATCTCTGGGGCA GGTTCCCTGGCATCACACCCCCTTCCAACATCTCTGGGGCA < 41bp 1 0.00739321886574842 1 0.343580514192581 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111154071 chr13:111154061 synonymous SNV . 0 11 hm5C_associated_SNPs_10356 0 0 3 METTL3 POSTAR2 GSE46705,GSM1135012 chr13:111154060-111154085
64251 chr13 111287909 111287909 1 + G A rs144532361 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTCCAGAAAGGAGAGCACGACATCCTCTCCAACGGCCA < 41bp 1 0.76906438084522 1 0.506144762039185 experiment 0.46187123830956 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287909 nonsynonymous SNV 0.001 0 20 hm5C_associated_SNPs_10360 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111287898-111287936
64251 chr13 111287925 111287925 1 + C T rs34104098 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAATGGCCA < 41bp 1 0.699248008708769 1 0.382514804601669 experiment 0.601503982582462 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287925 synonymous SNV . 0 36 hm5C_associated_SNPs_10361 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111287898-111287936
64251 chr13 111290880 111290880 1 + G A rs330563 111290877 + 111290857 111290897 41 CAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAA CAAGCTCTTTGAAACCTGAGCCCACGCAGACCAGAAGTAAA < 41bp 1 0.0588939145526033 1 0.0615028738975525 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111290877 chr13:111290880 . . 0 24 hm5C_associated_SNPs_10362 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290880 111290880 1 + G A rs330563 111290878 + 111290858 111290898 41 AAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAAC AAGCTCTTTGAAACCTGAGCCCACGCAGACCAGAAGTAAAC < 41bp 1 0.187930165617663 1 0.157225877046585 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111290878 chr13:111290880 . . 0 23 hm5C_associated_SNPs_10363 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290880 111290880 1 + G A rs330563 111290879 + 111290859 111290899 41 AGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA AGCTCTTTGAAACCTGAGCCCACGCAGACCAGAAGTAAACA < 41bp 1 0.412269200362712 1 0.185937196016312 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111290879 chr13:111290880 . . 0 22 hm5C_associated_SNPs_10364 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290880 111290880 1 + G A rs330563 111290881 + 111290861 111290901 41 CTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGG CTCTTTGAAACCTGAGCCCACGCAGACCAGAAGTAAACAGG < 41bp 1 0.5373091835678 1 0.254319131374359 experiment 0.9253816328644 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 UTR3 Human protein_coding chr13:111290881 chr13:111290880 . . 0 20 hm5C_associated_SNPs_10365 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111366226 111366226 1 + C A rs192537175 111366213 + 111366193 111366233 41 CGCGCTCGTACGCGCGGCCCCCGGCGCCAGCCCCGCCGCCT CGCGCTCGTACGCGCGGCCCCCGGCGCCAGCCCAGCCGCCT < 41bp 1 0.725721786363267 1 0.411218017339706 experiment 0.548556427273466 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ING1 ENSG00000153487 UTR5 Human protein_coding chr13:111366213 chr13:111366226 . . 0 34 hm5C_associated_SNPs_10366 0 0 1 DDX3X POSTAR2 ENCODE chr13:111366208-111366289
64251 chr13 113487196 113487196 1 + G A rs138532095 113487177 + 113487157 113487197 41 GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCGG GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCAG < 41bp 1 0.690938610137034 1 0.753544926643372 experiment 0.618122779725932 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487177 chr13:113487196 nonsynonymous SNV 0.990 3 40 hm5C_associated_SNPs_10368 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:113487173-113487205
64251 chr13 113729367 113729367 1 + A G rs117508840 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AGCAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.720542258637423 1 0.910964787006378 experiment 0.558915482725154 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729367 nonsynonymous SNV 0.353 0 2 hm5C_associated_SNPs_10370 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113729341-113729369
64251 chr13 113732707 113732707 1 + C T rs145119738 113732702 + 113732682 113732722 41 CGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCT CGGCGAGGCTCTGAGAACTCCAGCTTCGAGGGCGGTGCGCT < 41bp 1 0.386964935412722 1 0.39242947101593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113732702 chr13:113732707 nonsynonymous SNV 0.830 0 26 hm5C_associated_SNPs_10371 0 0 6 BUD13 POSTAR2 ENCODE chr13:113732629-113732725
64251 chr13 113741590 113741590 1 + G A rs9604022 113741589 + 113741569 113741609 41 CAAGCTGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC CAAGCTGCTGATGCAGGGCTCATTCAGCGTCTGGACCGACC < 41bp 1 0.0309025996905276 1 0.0591806471347809 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113741589 chr13:113741590 synonymous SNV . 0 22 hm5C_associated_SNPs_10372 0 0 3 PPIG POSTAR2 ENCODE chr13:113741543-113741744
64251 chr13 113863128 113863128 1 + G A rs542701792 113863147 + 113863127 113863167 41 CGGGGTCTTTCTGCCGGGGCCCCGTCCTCTCAGCCGGGACG CAGGGTCTTTCTGCCGGGGCCCCGTCCTCTCAGCCGGGACG < 41bp 1 0.418283952734774 1 0.0611231327056885 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUL4A;PCID2 ENSG00000139842 UTR5 Human protein_coding chr13:113863147 chr13:113863128 . . 0 2 hm5C_associated_SNPs_10373 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:113863116-113863154
64251 chr13 113863128 113863128 1 + G A rs542701792 113863148 + 113863128 113863168 41 GGGGTCTTTCTGCCGGGGCCCCGTCCTCTCAGCCGGGACGC AGGGTCTTTCTGCCGGGGCCCCGTCCTCTCAGCCGGGACGC < 41bp 1 0.191643708454308 1 0.276394933462143 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUL4A;PCID2 ENSG00000139842 UTR5 Human protein_coding chr13:113863148 chr13:113863128 . . 0 1 hm5C_associated_SNPs_10374 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:113863116-113863154
64251 chr13 113976753 113976753 1 + A C rs548499764 113976770 + 113976750 113976790 41 GGCACAGCAGCTGCAGGGGCCTCTGTTCCTTTCTCTGGGCT GGCCCAGCAGCTGCAGGGGCCTCTGTTCCTTTCTCTGGGCT < 41bp 1 0.393650460137982 1 0.0762401223182678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113976770 chr13:113976753 . . 0 4 hm5C_associated_SNPs_10375 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:113976751-113976790
64251 chr13 113976786 113976786 1 + G A rs559714284 113976770 + 113976750 113976790 41 GGCACAGCAGCTGCAGGGGCCTCTGTTCCTTTCTCTGGGCT GGCACAGCAGCTGCAGGGGCCTCTGTTCCTTTCTCTAGGCT < 41bp 1 0.349945375696364 1 0.0694396793842316 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113976770 chr13:113976786 . . 0 37 hm5C_associated_SNPs_10376 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:113976751-113976790
64251 chr13 114175032 114175032 1 + G A rs2260335 114175039 + 114175019 114175059 41 CATACAGGCGGGCGCCAGTGCATCTTCTAGGTAAACGCTTT CATACAGGCGGGCACCAGTGCATCTTCTAGGTAAACGCTTT < 41bp 1 0.179017648771792 1 0.14364105463028 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114175039 chr13:114175032 nonsynonymous SNV 0.001 0 14 hm5C_associated_SNPs_10377 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr13:114175026-114175048
64251 chr13 114175038 114175038 1 + G A rs7319493 114175039 + 114175019 114175059 41 CATACAGGCGGGCGCCAGTGCATCTTCTAGGTAAACGCTTT CATACAGGCGGGCGCCAGTACATCTTCTAGGTAAACGCTTT < 41bp 1 0.24181272385786 1 0.278241991996765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114175039 chr13:114175038 nonsynonymous SNV 0.000 0 20 hm5C_associated_SNPs_10378 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr13:114175026-114175048
64251 chr13 114541079 114541079 1 - G A rs201561637 114541062 - 114541042 114541082 41 CAGCGGCTTCGAGCTCTCCTCTGATGGCAGGACCTGCCAAG CAGTGGCTTCGAGCTCTCCTCTGATGGCAGGACCTGCCAAG < 41bp 1 0.502441603901384 1 0.388643741607666 experiment 0.995116792197232 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541062 chr13:114541079 synonymous SNV . 0 4 hm5C_associated_SNPs_10379 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114541059-114541091
64251 chr13 115008318 115008318 1 + C G rs17337940 115008298 + 115008278 115008318 41 TGATTTTGCCGCCCCCTGCCCCGGGAACAGTTGGCAATGTC TGATTTTGCCGCCCCCTGCCCCGGGAACAGTTGGCAATGTG < 41bp 1 0.374496141823371 1 0.717645525932312 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CDC16 ENSG00000130177 intronic Human protein_coding chr13:115008298 chr13:115008318 . . 0 41 hm5C_associated_SNPs_10380 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:115008305-115008327
64251 chr13 115008318 115008318 1 + C G rs17337940 115008299 + 115008279 115008319 41 GATTTTGCCGCCCCCTGCCCCGGGAACAGTTGGCAATGTCT GATTTTGCCGCCCCCTGCCCCGGGAACAGTTGGCAATGTGT < 41bp 1 0.698352463856098 1 0.888521730899811 experiment 0.603295072287804 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CDC16 ENSG00000130177 intronic Human protein_coding chr13:115008299 chr13:115008318 . . 0 40 hm5C_associated_SNPs_10381 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:115008305-115008327
64251 chr14 20822308 20822308 1 + A G rs3093921 20822301 + 20822281 20822321 41 CTCCCTTGAAGCCAGAGTCACAGCTAGATCTTCGGGTACAG CTCCCTTGAAGCCAGAGTCACAGCTAGGTCTTCGGGTACAG < 41bp 1 0.476678638209382 1 0.167931646108627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARP2 ENSG00000129484 CDS Human protein_coding chr14:20822301 chr14:20822308 nonsynonymous SNV 0.965 2 28 hm5C_associated_SNPs_10382 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20822295-20822324
64251 chr14 20937588 20937588 1 + G A rs17881206 20937582 + 20937562 20937602 41 GCCAACTGTGCGAACCAGACCCGGCAGCCTTGCTCAGTTCA GCCAACTGTGCGAACCAGACCCGGCAACCTTGCTCAGTTCA < 41bp 1 0.273742835884364 1 0.397435486316681 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 UTR5 Human protein_coding chr14:20937582 chr14:20937588 . . 0 27 hm5C_associated_SNPs_10383 1 0 8 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:20937571-20937596
64251 chr14 20937593 20937593 1 + G A rs115464597 20937582 + 20937562 20937602 41 GCCAACTGTGCGAACCAGACCCGGCAGCCTTGCTCAGTTCA GCCAACTGTGCGAACCAGACCCGGCAGCCTTACTCAGTTCA < 41bp 1 0.270827773930248 1 0.456937998533249 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 UTR5 Human protein_coding chr14:20937582 chr14:20937593 . . 0 32 hm5C_associated_SNPs_10384 0 0 11 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:20937571-20937596
64251 chr14 20937601 20937601 1 + C G rs113248050 20937582 + 20937562 20937602 41 GCCAACTGTGCGAACCAGACCCGGCAGCCTTGCTCAGTTCA GCCAACTGTGCGAACCAGACCCGGCAGCCTTGCTCAGTTGA < 41bp 1 0.273384197998195 1 0.408387005329132 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 UTR5 Human protein_coding chr14:20937582 chr14:20937601 . . 0 40 hm5C_associated_SNPs_10385 1 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:20937580-20937620
64251 chr14 20945014 20945014 1 + C T rs7785 20945033 + 20945013 20945053 41 TCTTACACAAGAGCTGGAGCCCGTGCCCTACCACACATCTG TTTTACACAAGAGCTGGAGCCCGTGCCCTACCACACATCTG < 41bp 1 0.348552092194092 1 0.60763818025589 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000258908 ncRNA_intronic Human lincRNA chr14:20945033 chr14:20945014 . . 0 2 hm5C_associated_SNPs_10386 1 0 24 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:20944974-20945058
64251 chr14 21078296 21078296 1 + C G rs115267088 21078301 + 21078281 21078321 41 TTAGCCAGTAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGG TTAGCCAGTAGGTAGGGTGGCCGAGCGGTCTAAGGCGCTGG < 41bp 1 0.423528316161747 1 0.17060986161232 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078301 chr14:21078296 . . 0 16 hm5C_associated_SNPs_10387 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:21078278-21078320
64251 chr14 21078296 21078296 1 + C G rs115267088 21078302 + 21078282 21078322 41 TAGCCAGTAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGA TAGCCAGTAGGTAGGGTGGCCGAGCGGTCTAAGGCGCTGGA < 41bp 1 0.505069612260252 1 0.666012048721313 experiment 0.989860775479497 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078302 chr14:21078296 . . 0 15 hm5C_associated_SNPs_10388 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:21078278-21078320
64251 chr14 21078296 21078296 1 + C G rs115267088 21078306 + 21078286 21078326 41 CAGTAGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAA CAGTAGGTAGGGTGGCCGAGCGGTCTAAGGCGCTGGATTAA < 41bp 1 0.351351470907418 1 0.747130572795868 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078306 chr14:21078296 . . 0 11 hm5C_associated_SNPs_10389 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:21078278-21078320
64251 chr14 21078296 21078296 1 + C G rs115267088 21078310 + 21078290 21078330 41 AGGTAGCGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT AGGTAGGGTGGCCGAGCGGTCTAAGGCGCTGGATTAAGGCT < 41bp 1 0.567669374200982 1 0.497092932462692 experiment 0.864661251598037 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078310 chr14:21078296 . . 0 7 hm5C_associated_SNPs_10390 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:21078278-21078320
64251 chr14 21078338 21078338 1 + C G rs144037355 21078332 + 21078312 21078352 41 AAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGG AAGGCGCTGGATTAAGGCTCCAGTCTGTTCGGGGGCGTGGG < 41bp 1 0.215057810479713 1 0.338429868221283 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078332 chr14:21078338 . . 0 27 hm5C_associated_SNPs_10391 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221663 chr14:21078320-21078340
64251 chr14 21078338 21078338 1 + C G rs144037355 21078355 + 21078335 21078375 41 TCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGT TCTGTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGT < 41bp 1 0.551905324498866 1 0.355390131473541 experiment 0.896189351002268 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078355 chr14:21078338 . . 0 4 hm5C_associated_SNPs_10392 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221663 chr14:21078320-21078340
64251 chr14 21078346 21078346 1 + G A rs147322006 21078332 + 21078312 21078352 41 AAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGG AAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGACGTGGG < 41bp 1 0.180129364580148 1 0.297093987464905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078332 chr14:21078346 . . 0 35 hm5C_associated_SNPs_10393 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21078346 21078346 1 + G A rs147322006 21078338 + 21078318 21078358 41 CTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAA CTGGATTAAGGCTCCAGTCTCTTCGGGGACGTGGGTTCGAA < 41bp 1 0.51850166636908 1 0.252295851707458 experiment 0.96299666726184 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078338 chr14:21078346 . . 0 29 hm5C_associated_SNPs_10394 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21078346 21078346 1 + G A rs147322006 21078355 + 21078335 21078375 41 TCTCTTCGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGT TCTCTTCGGGGACGTGGGTTCGAATCCCACCGCTGCCAGGT < 41bp 1 0.490639009664933 1 0.273589313030243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078355 chr14:21078346 . . 0 12 hm5C_associated_SNPs_10395 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21078346 21078346 1 + G A rs147322006 21078361 + 21078341 21078381 41 CGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCC CGGGGACGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCC < 41bp 1 0.280118426201855 1 0.159199804067612 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078361 chr14:21078346 . . 0 6 hm5C_associated_SNPs_10396 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21078346 21078346 1 + G A rs147322006 21078364 + 21078344 21078384 41 GGGCGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCCCTT GGACGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCCCTT < 41bp 1 0.409677773228046 1 0.190875262022018 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078364 chr14:21078346 . . 0 3 hm5C_associated_SNPs_10397 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21078346 21078346 1 + G A rs147322006 21078365 + 21078345 21078385 41 GGCGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCCCTTT GACGTGGGTTCGAATCCCACCGCTGCCAGGTGCTTCCCTTT < 41bp 1 0.362197902595492 1 0.35090035200119 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000173464;ENSG00000259060 upstream Human other chr14:21078365 chr14:21078346 . . 0 2 hm5C_associated_SNPs_10398 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21078320-21078360
64251 chr14 21101209 21101209 1 + G A rs561874672 21101190 + 21101170 21101210 41 GTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGT GTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGAT < 41bp 1 0.618038042243848 1 0.764019727706909 experiment 0.763923915512305 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101190 chr14:21101209 . . 0 40 hm5C_associated_SNPs_10399 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101209 21101209 1 + G A rs561874672 21101192 + 21101172 21101212 41 TGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC TGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGATCC < 41bp 1 0.286054632084437 1 0.304837375879288 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101192 chr14:21101209 . . 0 38 hm5C_associated_SNPs_10400 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101209 21101209 1 + G A rs561874672 21101194 + 21101174 21101214 41 GTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG GTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGATCCCG < 41bp 1 0.187306461247965 1 0.09068363904953 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101194 chr14:21101209 . . 0 36 hm5C_associated_SNPs_10401 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101209 21101209 1 + G A rs561874672 21101203 + 21101183 21101223 41 TATGATTCTCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTTGGGTGCGAGAGATCCCGGGTTCAAAT < 41bp 1 0.717413952595676 1 0.444129675626755 experiment 0.565172094808648 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101203 chr14:21101209 . . 0 27 hm5C_associated_SNPs_10402 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101209 21101209 1 + G A rs561874672 21101211 + 21101191 21101231 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGCGAGAGATCCCGGGTTCAAATCCCGGACG < 41bp 1 0.781000664858618 1 0.758889675140381 experiment 0.437998670282764 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101211 chr14:21101209 . . 0 19 hm5C_associated_SNPs_10403 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101228 21101228 1 + G A rs113767679 21101211 + 21101191 21101231 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGAACG < 41bp 1 0.711752663807311 1 0.612094759941101 experiment 0.576494672385379 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101211 chr14:21101228 . . 0 38 hm5C_associated_SNPs_10404 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101228 21101228 1 + G A rs113767679 21101212 + 21101192 21101232 41 CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGAACGA < 41bp 1 0.733898251628094 1 0.752159535884857 experiment 0.532203496743811 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101212 chr14:21101228 . . 0 37 hm5C_associated_SNPs_10405 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101228 21101228 1 + G A rs113767679 21101236 + 21101216 21101256 41 GTTCAAATCCCGGACGAGCCCCTTTACTTTCCTTTCCGTTT GTTCAAATCCCGAACGAGCCCCTTTACTTTCCTTTCCGTTT < 41bp 1 0.0222384139035635 1 0.0691747069358826 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101236 chr14:21101228 . . 0 13 hm5C_associated_SNPs_10406 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21101233 21101233 1 + G A rs571096971 21101236 + 21101216 21101256 41 GTTCAAATCCCGGACGAGCCCCTTTACTTTCCTTTCCGTTT GTTCAAATCCCGGACGAACCCCTTTACTTTCCTTTCCGTTT < 41bp 1 0.0420429727344531 1 0.0956867933273315 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LOC254028;OR6S1 ENSG00000239327;ENSG00000181803 intergenic Human other chr14:21101236 chr14:21101233 . . 0 18 hm5C_associated_SNPs_10407 0 0 29 SSB POSTAR2 GSE95683,GSM2521599 chr14:21101157-21101242
64251 chr14 21151461 21151461 1 + G A rs138175896 21151442 + 21151422 21151462 41 TTCCGTGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGGA TTCCGTGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGAA < 41bp 1 0.565963907059417 1 0.103697597980499 experiment 0.868072185881167 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151442 chr14:21151461 . . 0 40 hm5C_associated_SNPs_10408 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151461 21151461 1 + G A rs138175896 21151444 + 21151424 21151464 41 CCGTGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACT CCGTGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGAACT < 41bp 1 0.359317336266635 1 0.490171253681183 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151444 chr14:21151461 . . 0 38 hm5C_associated_SNPs_10409 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151461 21151461 1 + G A rs138175896 21151447 + 21151427 21151467 41 TGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGGACTGTA TGCTTCCTTCGATAGCTCAGCTGGTAGAGCGGAGAACTGTA < 41bp 1 0.316399843033991 1 0.38305452466011 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151447 chr14:21151461 . . 0 35 hm5C_associated_SNPs_10410 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151461 21151461 1 + G A rs138175896 21151456 + 21151436 21151476 41 CGATAGCTCAGCTGGTAGAGCGGAGGACTGTAGTACTTAAT CGATAGCTCAGCTGGTAGAGCGGAGAACTGTAGTACTTAAT < 41bp 1 0.413390388730153 1 0.741814255714417 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151456 chr14:21151461 . . 0 26 hm5C_associated_SNPs_10411 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151461 21151461 1 + G A rs138175896 21151463 + 21151443 21151483 41 TCAGCTGGTAGAGCGGAGGACTGTAGTACTTAATGTGTGGT TCAGCTGGTAGAGCGGAGAACTGTAGTACTTAATGTGTGGT < 41bp 1 0.476914011979236 1 0.191836714744568 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151463 chr14:21151461 . . 0 19 hm5C_associated_SNPs_10412 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151461 21151461 1 + G A rs138175896 21151471 + 21151451 21151491 41 TAGAGCGGAGGACTGTAGTACTTAATGTGTGGTCATCCTTA TAGAGCGGAGAACTGTAGTACTTAATGTGTGGTCATCCTTA < 41bp 1 0.280338889329828 1 0.181295692920685 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151471 chr14:21151461 . . 0 11 hm5C_associated_SNPs_10413 0 0 41 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:21151420-21151480
64251 chr14 21151483 21151483 1 + T G rs61976879 21151463 + 21151443 21151483 41 TCAGCTGGTAGAGCGGAGGACTGTAGTACTTAATGTGTGGT TCAGCTGGTAGAGCGGAGGACTGTAGTACTTAATGTGTGGG < 41bp 1 0.447009290718827 1 0.164619892835617 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151463 chr14:21151483 . . 0 41 hm5C_associated_SNPs_10414 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151471 + 21151451 21151491 41 TAGAGCGGAGGACTGTAGTACTTAATGTGTGGTCATCCTTA TAGAGCGGAGGACTGTAGTACTTAATGTGTGGGCATCCTTA < 41bp 1 0.281522022547504 1 0.298241913318634 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151471 chr14:21151483 . . 0 33 hm5C_associated_SNPs_10415 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151484 + 21151464 21151504 41 TGTAGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGTACTTAATGTGTGGGCATCCTTAGGTCGCTGGTTCG < 41bp 1 0.145869015823558 1 0.130103975534439 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151484 chr14:21151483 . . 0 20 hm5C_associated_SNPs_10416 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151487 + 21151467 21151507 41 AGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATT AGTACTTAATGTGTGGGCATCCTTAGGTCGCTGGTTCGATT < 41bp 1 0.0914733245726297 1 0.0699045956134796 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151487 chr14:21151483 . . 0 17 hm5C_associated_SNPs_10417 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151488 + 21151468 21151508 41 GTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTC GTACTTAATGTGTGGGCATCCTTAGGTCGCTGGTTCGATTC < 41bp 1 0.545178353401718 1 0.364154875278473 experiment 0.909643293196564 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151488 chr14:21151483 . . 0 16 hm5C_associated_SNPs_10418 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151495 + 21151475 21151515 41 ATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCG ATGTGTGGGCATCCTTAGGTCGCTGGTTCGATTCCGGCTCG < 41bp 1 0.711509098081385 1 0.442890375852585 experiment 0.57698180383723 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151495 chr14:21151483 . . 0 9 hm5C_associated_SNPs_10419 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151497 + 21151477 21151517 41 GTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA GTGTGGGCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA < 41bp 1 0.569585487832709 1 0.0972063541412354 experiment 0.860829024334582 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151497 chr14:21151483 . . 0 7 hm5C_associated_SNPs_10420 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151483 21151483 1 + T G rs61976879 21151503 + 21151483 21151523 41 TCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC GCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC < 41bp 1 0.119273552047615 1 0.252111852169037 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151503 chr14:21151483 . . 0 1 hm5C_associated_SNPs_10421 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151471 + 21151451 21151491 41 TAGAGCGGAGGACTGTAGTACTTAATGTGTGGTCATCCTTA TAGAGCGGAGGACTGTAGTACTTAATGTGTGGTTATCCTTA < 41bp 1 0.282960328616671 1 0.250145524740219 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151471 chr14:21151484 . . 0 34 hm5C_associated_SNPs_10422 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151487 + 21151467 21151507 41 AGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATT AGTACTTAATGTGTGGTTATCCTTAGGTCGCTGGTTCGATT < 41bp 1 0.158072186152812 1 0.0750752091407776 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151487 chr14:21151484 . . 0 18 hm5C_associated_SNPs_10423 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151488 + 21151468 21151508 41 GTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTC GTACTTAATGTGTGGTTATCCTTAGGTCGCTGGTTCGATTC < 41bp 1 0.573459448397943 1 0.346902012825012 experiment 0.853081103204114 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151488 chr14:21151484 . . 0 17 hm5C_associated_SNPs_10424 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151495 + 21151475 21151515 41 ATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCG ATGTGTGGTTATCCTTAGGTCGCTGGTTCGATTCCGGCTCG < 41bp 1 0.664299624514088 1 0.445860892534256 experiment 0.671400750971825 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151495 chr14:21151484 . . 0 10 hm5C_associated_SNPs_10425 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151497 + 21151477 21151517 41 GTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA GTGTGGTTATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA < 41bp 1 0.538659856016871 1 0.12548890709877 experiment 0.922680287966257 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151497 chr14:21151484 . . 0 8 hm5C_associated_SNPs_10426 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151484 21151484 1 + C T rs115156442 21151503 + 21151483 21151523 41 TCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC TTATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC < 41bp 1 0.100431608229653 1 0.284753739833832 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151503 chr14:21151484 . . 0 2 hm5C_associated_SNPs_10427 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151484 + 21151464 21151504 41 TGTAGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGTACTTAATGTGTGGTCATCCTTAGGTCACTGGTTCG < 41bp 1 0.185309064368557 1 0.078269898891449 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151484 chr14:21151496 . . 0 33 hm5C_associated_SNPs_10428 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151487 + 21151467 21151507 41 AGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATT AGTACTTAATGTGTGGTCATCCTTAGGTCACTGGTTCGATT < 41bp 1 0.108886760579247 1 0.10602542757988 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151487 chr14:21151496 . . 0 30 hm5C_associated_SNPs_10429 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151488 + 21151468 21151508 41 GTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTC GTACTTAATGTGTGGTCATCCTTAGGTCACTGGTTCGATTC < 41bp 1 0.493364581819488 1 0.261006146669388 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151488 chr14:21151496 . . 0 29 hm5C_associated_SNPs_10430 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151495 + 21151475 21151515 41 ATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCG ATGTGTGGTCATCCTTAGGTCACTGGTTCGATTCCGGCTCG < 41bp 1 0.593935985388836 1 0.222897827625275 experiment 0.812128029222327 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151495 chr14:21151496 . . 0 22 hm5C_associated_SNPs_10431 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151497 + 21151477 21151517 41 GTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA GTGTGGTCATCCTTAGGTCACTGGTTCGATTCCGGCTCGAA < 41bp 1 0.544446144100656 1 0.0601140558719635 experiment 0.911107711798688 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151497 chr14:21151496 . . 0 20 hm5C_associated_SNPs_10432 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151503 + 21151483 21151523 41 TCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC TCATCCTTAGGTCACTGGTTCGATTCCGGCTCGAAGGAGAC < 41bp 1 0.0809303956511068 1 0.117568761110306 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151503 chr14:21151496 . . 0 14 hm5C_associated_SNPs_10433 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151508 + 21151488 21151528 41 CTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGC CTTAGGTCACTGGTTCGATTCCGGCTCGAAGGAGACGCTGC < 41bp 1 0.380757817889976 1 0.741431832313538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151508 chr14:21151496 . . 0 9 hm5C_associated_SNPs_10434 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151509 + 21151489 21151529 41 TTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCT TTAGGTCACTGGTTCGATTCCGGCTCGAAGGAGACGCTGCT < 41bp 1 0.450336484812367 1 0.806030869483948 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151509 chr14:21151496 . . 0 8 hm5C_associated_SNPs_10435 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151512 + 21151492 21151532 41 GGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTT GGTCACTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTT < 41bp 1 0.794196011218174 1 0.843331217765808 experiment 0.411607977563652 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151512 chr14:21151496 . . 0 5 hm5C_associated_SNPs_10436 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151496 21151496 1 + G A rs547405309 21151514 + 21151494 21151534 41 TCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTTTT TCACTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTTTT < 41bp 1 0.441460270619975 1 0.811777830123901 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151514 chr14:21151496 . . 0 3 hm5C_associated_SNPs_10437 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151484 + 21151464 21151504 41 TGTAGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCG TGTAGTACTTAATGTGTGGTCATCCTTAGGTCGCTGTTTCG < 41bp 1 0.154037631081489 1 0.0733512043952942 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151484 chr14:21151500 . . 0 37 hm5C_associated_SNPs_10438 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151487 + 21151467 21151507 41 AGTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATT AGTACTTAATGTGTGGTCATCCTTAGGTCGCTGTTTCGATT < 41bp 1 0.109866257261969 1 0.0456793606281281 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151487 chr14:21151500 . . 0 34 hm5C_associated_SNPs_10439 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151488 + 21151468 21151508 41 GTACTTAATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTC GTACTTAATGTGTGGTCATCCTTAGGTCGCTGTTTCGATTC < 41bp 1 0.528172727802631 1 0.126646757125854 experiment 0.943654544394738 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151488 chr14:21151500 . . 0 33 hm5C_associated_SNPs_10440 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151495 + 21151475 21151515 41 ATGTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCG ATGTGTGGTCATCCTTAGGTCGCTGTTTCGATTCCGGCTCG < 41bp 1 0.610874598099743 1 0.222041249275208 experiment 0.778250803800514 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151495 chr14:21151500 . . 0 26 hm5C_associated_SNPs_10441 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151497 + 21151477 21151517 41 GTGTGGTCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAA GTGTGGTCATCCTTAGGTCGCTGTTTCGATTCCGGCTCGAA < 41bp 1 0.165978312973809 1 0.0232470631599426 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151497 chr14:21151500 . . 0 24 hm5C_associated_SNPs_10442 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151503 + 21151483 21151523 41 TCATCCTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGAC TCATCCTTAGGTCGCTGTTTCGATTCCGGCTCGAAGGAGAC < 41bp 1 0.146540409867384 1 0.514171600341797 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151503 chr14:21151500 . . 0 18 hm5C_associated_SNPs_10443 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151508 + 21151488 21151528 41 CTTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGC CTTAGGTCGCTGTTTCGATTCCGGCTCGAAGGAGACGCTGC < 41bp 1 0.392159739765037 1 0.711688935756683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151508 chr14:21151500 . . 0 13 hm5C_associated_SNPs_10444 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151509 + 21151489 21151529 41 TTAGGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCT TTAGGTCGCTGTTTCGATTCCGGCTCGAAGGAGACGCTGCT < 41bp 1 0.402663110810625 1 0.800949573516846 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151509 chr14:21151500 . . 0 12 hm5C_associated_SNPs_10445 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151512 + 21151492 21151532 41 GGTCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTT GGTCGCTGTTTCGATTCCGGCTCGAAGGAGACGCTGCTGTT < 41bp 1 0.767308918864903 1 0.890447497367859 experiment 0.465382162270194 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151512 chr14:21151500 . . 0 9 hm5C_associated_SNPs_10446 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21151500 21151500 1 + G T rs565990470 21151514 + 21151494 21151534 41 TCGCTGGTTCGATTCCGGCTCGAAGGAGACGCTGCTGTTTT TCGCTGTTTCGATTCCGGCTCGAAGGAGACGCTGCTGTTTT < 41bp 1 0.387933521976031 1 0.817476749420166 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818 upstream Human other chr14:21151514 chr14:21151500 . . 0 7 hm5C_associated_SNPs_10447 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21151420-21151520
64251 chr14 21152219 21152219 1 + G A rs149815387 21152213 + 21152193 21152233 41 TATGATTCTCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTTGGGTGCGAGAGATCCCGGGTTCAAAT < 41bp 1 0.734617842673742 1 0.444129675626755 experiment 0.530764314652515 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152213 chr14:21152219 . . 0 27 hm5C_associated_SNPs_10448 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152219 21152219 1 + G A rs149815387 21152229 + 21152209 21152249 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCG GGTGCGAGAGATCCCGGGTTCAAATCCCGGACGAGCCCTCG < 41bp 1 0.398494514998023 1 0.256541967391968 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152229 chr14:21152219 . . 0 11 hm5C_associated_SNPs_10449 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152219 21152219 1 + G A rs149815387 21152234 + 21152214 21152254 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCT GAGAGATCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCT < 41bp 1 0.608252189731889 1 0.877865076065063 experiment 0.783495620536222 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152234 chr14:21152219 . . 0 6 hm5C_associated_SNPs_10450 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152219 21152219 1 + G A rs149815387 21152235 + 21152215 21152255 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTA AGAGATCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTA < 41bp 1 0.783763182224406 1 0.8636754155159 experiment 0.432473635551188 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152235 chr14:21152219 . . 0 5 hm5C_associated_SNPs_10451 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152219 21152219 1 + G A rs149815387 21152236 + 21152216 21152256 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTAC GAGATCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTAC < 41bp 1 0.61169458560968 1 0.700473606586456 experiment 0.77661082878064 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152236 chr14:21152219 . . 0 4 hm5C_associated_SNPs_10452 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152221 + 21152201 21152241 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCGCGGACG < 41bp 1 0.759853885192733 1 0.561605274677277 experiment 0.480292229614534 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152221 chr14:21152235 . . 0 35 hm5C_associated_SNPs_10453 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152222 + 21152202 21152242 41 CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCGCGGACGA < 41bp 1 0.792637300183787 1 0.741061627864838 experiment 0.414725399632426 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152222 chr14:21152235 . . 0 34 hm5C_associated_SNPs_10454 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152229 + 21152209 21152249 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCG GGTGCGAGAGGTCCCGGGTTCAAATCGCGGACGAGCCCTCG < 41bp 1 0.455736931756805 1 0.602563858032227 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152229 chr14:21152235 . . 0 27 hm5C_associated_SNPs_10455 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152236 + 21152216 21152256 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTAC GAGGTCCCGGGTTCAAATCGCGGACGAGCCCTCGTGGCTAC < 41bp 1 0.607817961221085 1 0.732941567897797 experiment 0.784364077557831 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152236 chr14:21152235 . . 0 20 hm5C_associated_SNPs_10456 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152240 + 21152220 21152260 41 TCCCGGGTTCAAATCCCGGACGAGCCCTCGTGGCTACTGTT TCCCGGGTTCAAATCGCGGACGAGCCCTCGTGGCTACTGTT < 41bp 1 0.187888542637029 1 0.154674619436264 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152240 chr14:21152235 . . 0 16 hm5C_associated_SNPs_10457 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152244 + 21152224 21152264 41 GGGTTCAAATCCCGGACGAGCCCTCGTGGCTACTGTTTTTC GGGTTCAAATCGCGGACGAGCCCTCGTGGCTACTGTTTTTC < 41bp 1 0.0579436477349927 1 0.0372527837753296 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152244 chr14:21152235 . . 0 12 hm5C_associated_SNPs_10458 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152245 + 21152225 21152265 41 GGTTCAAATCCCGGACGAGCCCTCGTGGCTACTGTTTTTCC GGTTCAAATCGCGGACGAGCCCTCGTGGCTACTGTTTTTCC < 41bp 1 0.162506861657028 1 0.143843501806259 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152245 chr14:21152235 . . 0 11 hm5C_associated_SNPs_10459 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21152235 21152235 1 + C G rs146849858 21152246 + 21152226 21152266 41 GTTCAAATCCCGGACGAGCCCTCGTGGCTACTGTTTTTCCA GTTCAAATCGCGGACGAGCCCTCGTGGCTACTGTTTTTCCA < 41bp 1 0.728385622000958 1 0.264136582612991 experiment 0.543228755998083 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ANG;RNASE4 ENSG00000214274;ENSG00000258818;ENSG00000259171 upstream Human other chr14:21152246 chr14:21152235 . . 0 10 hm5C_associated_SNPs_10460 0 0 34 TARDBP POSTAR2 DRA001158,DRS012386 chr14:21152169-21152254
64251 chr14 21462733 21462733 1 + A G rs373040366 21462722 + 21462702 21462742 41 GTGGTTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT GTGGTTCAGAATCTGGGGAGCCTTATATTCCGGGTGTCTTT < 41bp 1 0.0804766480575353 1 0.015078067779541 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21462722 chr14:21462733 synonymous SNV . 0 32 hm5C_associated_SNPs_10461 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:21462720-21462740
64251 chr14 21543514 21543514 1 + C T rs61739627 21543511 + 21543491 21543531 41 GACACACAGGCCCAGAAGGCCCCCTGTCTGACACTCCAACA GACACACAGGCCCAGAAGGCCCCTTGTCTGACACTCCAACA < 41bp 1 0.047934614814887 1 0.03591588139534 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21543511 chr14:21543514 synonymous SNV . 0 24 hm5C_associated_SNPs_10462 0 0 2 EIF3H POSTAR2 ENCODE chr14:21543504-21543527
64251 chr14 21543514 21543514 1 + C T rs61739627 21543512 + 21543492 21543532 41 ACACACAGGCCCAGAAGGCCCCCTGTCTGACACTCCAACAC ACACACAGGCCCAGAAGGCCCCTTGTCTGACACTCCAACAC < 41bp 1 0.0627168802156346 1 0.0310387313365936 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21543512 chr14:21543514 synonymous SNV . 0 23 hm5C_associated_SNPs_10463 0 0 2 EIF3H POSTAR2 ENCODE chr14:21543504-21543527
64251 chr14 21553004 21553004 1 + C T rs749731 21553017 + 21552997 21553037 41 TTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGGC TTCTCTTTGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGGC < 41bp 1 0.136131236815016 1 0.163815885782242 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21553017 chr14:21553004 synonymous SNV . 0 8 hm5C_associated_SNPs_10464 0 0 1 GRWD1 POSTAR2 ENCODE chr14:21552974-21553005
64251 chr14 21945415 21945415 1 + A G rs2282046 21945416 + 21945396 21945436 41 GGAGCGATGAGGGTCTGAGACGGTGGGAGCGGTTGTGTGAA GGAGCGATGAGGGTCTGAGGCGGTGGGAGCGGTTGTGTGAA < 41bp 1 0.727021923822865 1 0.830065906047821 experiment 0.54595615235427 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 UTR5 Human protein_coding chr14:21945416 chr14:21945415 . . 0 20 hm5C_associated_SNPs_10465 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:21945385-21945434
64251 chr14 21945435 21945435 1 + A C rs150058163 21945416 + 21945396 21945436 41 GGAGCGATGAGGGTCTGAGACGGTGGGAGCGGTTGTGTGAA GGAGCGATGAGGGTCTGAGACGGTGGGAGCGGTTGTGTGCA < 41bp 1 0.721932278135925 1 0.720207512378693 experiment 0.556135443728151 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 UTR5 Human protein_coding chr14:21945416 chr14:21945435 . . 0 40 hm5C_associated_SNPs_10466 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21945401-21945437
64251 chr14 23341328 23341328 1 + A G rs56248501 23341343 + 23341323 23341363 41 CCCCTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCC CCCCTGCTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCC < 41bp 1 0.453229799967032 1 0.723110556602478 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341343 chr14:23341328 . . 0 6 hm5C_associated_SNPs_10468 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr14:23341317-23341339
64251 chr14 23341328 23341328 1 + A G rs56248501 23341344 + 23341324 23341364 41 CCCTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCT CCCTGCTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCT < 41bp 1 0.553658426206662 1 0.743054509162903 experiment 0.892683147586675 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341344 chr14:23341328 . . 0 5 hm5C_associated_SNPs_10469 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr14:23341317-23341339
64251 chr14 23341328 23341328 1 + A G rs56248501 23341346 + 23341326 23341366 41 CTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGG CTGCTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGG < 41bp 1 0.148531720988702 1 0.357043862342834 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341346 chr14:23341328 . . 0 3 hm5C_associated_SNPs_10470 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr14:23341317-23341339
64251 chr14 23341328 23341328 1 + A G rs56248501 23341347 + 23341327 23341367 41 TACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGC TGCTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGC < 41bp 1 0.481320957624369 1 0.34933602809906 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341347 chr14:23341328 . . 0 2 hm5C_associated_SNPs_10471 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr14:23341317-23341339
64251 chr14 23341349 23341349 1 + C T rs56859206 23341343 + 23341323 23341363 41 CCCCTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCC CCCCTACTCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCC < 41bp 1 0.518277225267755 1 0.614984512329102 experiment 0.96344554946449 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341343 chr14:23341349 . . 0 27 hm5C_associated_SNPs_10472 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341344 + 23341324 23341364 41 CCCTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCT CCCTACTCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCT < 41bp 1 0.586779194937855 1 0.37579470872879 experiment 0.82644161012429 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341344 chr14:23341349 . . 0 26 hm5C_associated_SNPs_10473 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341346 + 23341326 23341366 41 CTACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGG CTACTCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGG < 41bp 1 0.0894491707965461 1 0.155769884586334 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341346 chr14:23341349 . . 0 24 hm5C_associated_SNPs_10474 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341347 + 23341327 23341367 41 TACTCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGC TACTCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGGC < 41bp 1 0.289525908278212 1 0.0807730555534363 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341347 chr14:23341349 . . 0 23 hm5C_associated_SNPs_10475 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341350 + 23341330 23341370 41 TCCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGCATC TCCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGGCATC < 41bp 1 0.501242987386954 1 0.590849816799164 experiment 0.997514025226091 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341350 chr14:23341349 . . 0 20 hm5C_associated_SNPs_10476 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341351 + 23341331 23341371 41 CCCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGCATCC CCCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGGCATCC < 41bp 1 0.453039860237194 1 0.274400889873505 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341351 chr14:23341349 . . 0 19 hm5C_associated_SNPs_10477 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341349 23341349 1 + C T rs56859206 23341352 + 23341332 23341372 41 CCGGGCTGCCGCCGCCTCCCCGCCCCCAGCCCTGGCATCCA CCGGGCTGCCGCCGCCTTCCCGCCCCCAGCCCTGGCATCCA < 41bp 1 0.635561707810303 1 0.759906411170959 experiment 0.728876584379394 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341352 chr14:23341349 . . 0 18 hm5C_associated_SNPs_10478 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23341322-23341352
64251 chr14 23341427 23341427 1 + G A rs543033884 23341418 + 23341398 23341438 41 GAGCCCCCCTGGGGAGGCGGCACCAGGGAGCCTGGGCGCCC GAGCCCCCCTGGGGAGGCGGCACCAGGGAACCTGGGCGCCC < 41bp 1 0.777736185481754 1 0.436190843582153 experiment 0.444527629036492 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP10 ENSG00000197324 UTR5 Human protein_coding chr14:23341418 chr14:23341427 . . 0 30 hm5C_associated_SNPs_10479 0 0 6 DDX3X POSTAR2 ENCODE chr14:23341392-23341456
64251 chr14 24025505 24025505 1 + C A rs74039346 24025488 + 24025468 24025508 41 ACTGCTCCCGGCATTCCTCGCGAGTGTATGGCGTGGGCTCC ACTGCTCCCGGCATTCCTCGCGAGTGTATGGCGTGGGATCC < 41bp 1 0.685883862171584 1 0.910886108875275 experiment 0.628232275656832 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control THTPA ENSG00000157306 ncRNA_exonic Human processed_transcript chr14:24025488 chr14:24025505 . . 0 38 hm5C_associated_SNPs_10480 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:24025504-24025529
64251 chr14 24105681 24105681 1 + G A rs150738228 24105701 + 24105681 24105721 41 GTAACACTCACCGCGAAGGTCTGCAACTTCACTCCTGGGGC ATAACACTCACCGCGAAGGTCTGCAACTTCACTCCTGGGGC < 41bp 1 0.595501992592373 1 0.731002449989319 experiment 0.808996014815253 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105701 chr14:24105681 . . 0 1 hm5C_associated_SNPs_10481 0 0 7 GRWD1 POSTAR2 ENCODE chr14:24105670-24105694
64251 chr14 24105693 24105693 1 + G A rs138908130 24105701 + 24105681 24105721 41 GTAACACTCACCGCGAAGGTCTGCAACTTCACTCCTGGGGC GTAACACTCACCACGAAGGTCTGCAACTTCACTCCTGGGGC < 41bp 1 0.539659092575625 1 0.612451076507568 experiment 0.920681814848749 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105701 chr14:24105693 . . 0 13 hm5C_associated_SNPs_10482 0 0 4 GRWD1 POSTAR2 ENCODE chr14:24105670-24105694
64251 chr14 24105695 24105695 1 + G A rs185214176 24105701 + 24105681 24105721 41 GTAACACTCACCGCGAAGGTCTGCAACTTCACTCCTGGGGC GTAACACTCACCGCAAAGGTCTGCAACTTCACTCCTGGGGC < 41bp 1 0.616524437686269 1 0.735820710659027 experiment 0.766951124627462 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHRS2 ENSG00000100867 UTR5 Human protein_coding chr14:24105701 chr14:24105695 . . 0 15 hm5C_associated_SNPs_10483 0 0 3 LSM11 POSTAR2 ENCODE chr14:24105622-24105757
64251 chr14 24567504 24567504 1 + C T rs140683877 24567497 + 24567477 24567517 41 CTTCTCAGCGGGACACGGTACAACTCCCGCCTGGTGGGGCC CTTCTCAGCGGGACACGGTACAACTCCTGCCTGGTGGGGCC < 41bp 1 0.582962281397159 1 0.169971823692322 experiment 0.834075437205681 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567497 chr14:24567504 nonsynonymous SNV 0.328 0 28 hm5C_associated_SNPs_10485 0 0 1 RPS3 POSTAR2 ENCODE chr14:24567479-24567528
64251 chr14 24567508 24567508 1 + T C rs2229661 24567497 + 24567477 24567517 41 CTTCTCAGCGGGACACGGTACAACTCCCGCCTGGTGGGGCC CTTCTCAGCGGGACACGGTACAACTCCCGCCCGGTGGGGCC < 41bp 1 0.570940934267038 1 0.069913238286972 experiment 0.858118131465925 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567497 chr14:24567508 synonymous SNV . 0 32 hm5C_associated_SNPs_10486 0 0 1 RPS3 POSTAR2 ENCODE chr14:24567479-24567528
64251 chr14 24568323 24568323 1 + C T rs75497728 24568331 + 24568311 24568351 41 GTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTA GTGCCCGACCAGTGGGAGATCATCTCCTTCGGCAGCGGCTA < 41bp 1 0.292058318739974 1 0.150264292955399 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24568331 chr14:24568323 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_10487 0 0 2 RPS3 POSTAR2 ENCODE chr14:24568310-24568370
64251 chr14 24568340 24568340 1 + C T rs149974910 24568331 + 24568311 24568351 41 GTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTA GTGCCCGACCAGCGGGAGATCATCTCCTTTGGCAGCGGCTA < 41bp 1 0.256912945047723 1 0.225825428962708 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24568331 chr14:24568340 synonymous SNV . 0 30 hm5C_associated_SNPs_10488 0 0 3 PPIG POSTAR2 ENCODE chr14:24568326-24568378
64251 chr14 24701864 24701864 1 + T C rs191362314 24701874 + 24701854 24701894 41 GCAACCTCAGTGCGTGAACTCTGTTATCCAGAAGGCCTCGC GCAACCTCAGCGCGTGAACTCTGTTATCCAGAAGGCCTCGC < 41bp 1 0.456996852348221 1 0.0421622097492218 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPR2 ENSG00000100938 UTR5 Human protein_coding chr14:24701874 chr14:24701864 . . 0 11 hm5C_associated_SNPs_10489 0 0 1 DDX3X POSTAR2 ENCODE chr14:24701840-24701968
64251 chr14 24701872 24701872 1 + C T rs146484472 24701874 + 24701854 24701894 41 GCAACCTCAGTGCGTGAACTCTGTTATCCAGAAGGCCTCGC GCAACCTCAGTGCGTGAATTCTGTTATCCAGAAGGCCTCGC < 41bp 1 0.42133184017553 1 0.0338352024555206 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPR2 ENSG00000100938 UTR5 Human protein_coding chr14:24701874 chr14:24701872 . . 0 19 hm5C_associated_SNPs_10490 0 0 1 DDX3X POSTAR2 ENCODE chr14:24701840-24701968
64251 chr14 24707987 24707987 1 + C T rs45572034 24707977 + 24707957 24707997 41 GAATCCAATCTTCAGTGAGGCGTGCTAGACCTGAGCAGTTC GAATCCAATCTTCAGTGAGGCGTGCTAGACTTGAGCAGTTC < 41bp 1 0.394985197270358 1 0.24233490228653 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPR2 ENSG00000100938 UTR3 Human protein_coding chr14:24707977 chr14:24707987 . . 0 31 hm5C_associated_SNPs_10491 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr14:24707962-24708014
64251 chr14 24773387 24773387 1 + T C rs2144494 24773383 + 24773363 24773403 41 GACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTG GACGGGACCACAGCTTCTGTCCCTCGCCCAAAGTCCCGCTG < 41bp 1 0.14157074949073 1 0.121186465024948 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOP9 ENSG00000196943 CDS Human protein_coding chr14:24773383 chr14:24773387 synonymous SNV . 0 25 hm5C_associated_SNPs_10492 0 0 2 PPIG POSTAR2 ENCODE chr14:24773294-24773409
64251 chr14 24779933 24779933 1 + C A rs115630307 24779945 + 24779925 24779965 41 TCGCGGGCCACAGGCACAGCCTTCCTGCTGCTGGCGGCGCT TCGCGGGCAACAGGCACAGCCTTCCTGCTGCTGGCGGCGCT < 41bp 1 0.18187394428187 1 0.28450533747673 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LTB4R2 ENSG00000213906;ENSG00000272658 CDS Human other chr14:24779945 chr14:24779933 synonymous SNV . 0 9 hm5C_associated_SNPs_10493 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:24779847-24779934
64251 chr14 24784911 24784911 1 + T C rs3742511 24784923 + 24784903 24784943 41 TTCATCTCTCTGCTGGCTATCATCCTGCTGTCAGTGGCGCT TTCATCTCCCTGCTGGCTATCATCCTGCTGTCAGTGGCGCT < 41bp 1 0.114607541433437 1 0.778288424015045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTB4R ENSG00000213903 CDS Human protein_coding chr14:24784923 chr14:24784911 synonymous SNV . 0 9 hm5C_associated_SNPs_10494 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:24784900-24784920
64251 chr14 24906849 24906849 1 + T A rs10144287 24906853 + 24906833 24906873 41 GGAAGTGACAGGAAGTTAAGCTGTTCCTCTCCCTGGCTGCT GGAAGTGACAGGAAGTAAAGCTGTTCCTCTCCCTGGCTGCT < 41bp 1 0.179084644208452 1 0.0562637746334076 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KHNYN ENSG00000100441 UTR3 Human protein_coding chr14:24906853 chr14:24906849 . . 0 17 hm5C_associated_SNPs_10506 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr14:24906848-24906849
64251 chr14 24906866 24906866 1 + T C rs115319005 24906853 + 24906833 24906873 41 GGAAGTGACAGGAAGTTAAGCTGTTCCTCTCCCTGGCTGCT GGAAGTGACAGGAAGTTAAGCTGTTCCTCTCCCCGGCTGCT < 41bp 1 0.198859803715344 1 0.0939694344997406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KHNYN ENSG00000100441 UTR3 Human protein_coding chr14:24906853 chr14:24906866 . . 0 34 hm5C_associated_SNPs_10507 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:24906849-24906880
64251 chr14 24907513 24907513 1 + G A rs58499825 24907497 + 24907477 24907517 41 TGGTGTTGAGATGAACACGTCGATTTTTCACCAATCGATGA TGGTGTTGAGATGAACACGTCGATTTTTCACCAATCAATGA < 41bp 1 0.112095463954823 1 0.0424484312534332 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KHNYN ENSG00000100441 UTR3 Human protein_coding chr14:24907497 chr14:24907513 . . 0 37 hm5C_associated_SNPs_10508 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24907489-24907513
64251 chr14 24907925 24907925 1 + G A rs578021184 24907938 + 24907918 24907958 41 CACCTTTGAGGCTGGTCATACCTCCAGGAACAATACAGAGC CACCTTTAAGGCTGGTCATACCTCCAGGAACAATACAGAGC < 41bp 1 0.0286810606846971 1 0.0746482908725739 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KHNYN ENSG00000100441 UTR3 Human protein_coding chr14:24907938 chr14:24907925 . . 0 8 hm5C_associated_SNPs_10509 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr14:24907904-24907925
64251 chr14 24909629 24909629 1 - C A rs11538256 24909627 - 24909607 24909647 41 TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAA TTCGCCTGGGCCTGGGGGTCCCCATCGGCTCAGGCCACCAA < 41bp 1 0.356832918178708 1 0.160373687744141 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909627 chr14:24909629 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_10510 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr14 31494964 31494964 1 + G A rs147839434 31494972 + 31494952 31494992 41 GGAAAAGCCGTTGAGAGGACCATCACAACCTGAGCAGCACA GGAAAAGCCGTTAAGAGGACCATCACAACCTGAGCAGCACA < 41bp 1 0.277746929080624 1 0.30360934138298 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP4S1 ENSG00000100478 UTR5 Human protein_coding chr14:31494972 chr14:31494964 . . 0 13 hm5C_associated_SNPs_10511 0 0 4 NCBP2 POSTAR2 ENCODE chr14:31494910-31494973
64251 chr14 31494988 31494988 1 + G A rs78648016 31494972 + 31494952 31494992 41 GGAAAAGCCGTTGAGAGGACCATCACAACCTGAGCAGCACA GGAAAAGCCGTTGAGAGGACCATCACAACCTGAGCAACACA < 41bp 1 0.317287475281829 1 0.293773949146271 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP4S1 ENSG00000100478 UTR5 Human protein_coding chr14:31494972 chr14:31494988 . . 0 37 hm5C_associated_SNPs_10512 1 0 4 NCBP2 POSTAR2 ENCODE chr14:31494940-31494993
64251 chr14 37739659 37739659 1 + A T rs35870036 37739679 + 37739659 37739699 41 AGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA TGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA < 41bp 1 0.647710852890296 1 0.457667768001556 experiment 0.704578294219407 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37739679 chr14:37739659 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_10516 0 0 6 FBL POSTAR2 GSE43666,GSM1067864 chr14:37739640-37739678
64251 chr14 39650824 39650824 1 + C T rs1050136 39650831 + 39650811 39650851 41 GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC GTCGGAGTAGGGGTCGGGGACATAATAGAGATAGAAAGCAC < 41bp 1 0.727616430088505 1 0.224458932876587 experiment 0.544767139822991 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650831 chr14:39650824 synonymous SNV . 0 14 hm5C_associated_SNPs_10517 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr14 45580129 45580129 1 + A G rs75940101 45580111 + 45580091 45580131 41 ACTGTGATGAAAGATTTGGTCTGTATGTAATAGATTTTATT ACTGTGATGAAAGATTTGGTCTGTATGTAATAGATTTTGTT < 41bp 1 0.335684265429817 1 0.14521461725235 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD127 ENSG00000239043 ncRNA_exonic Human snoRNA chr14:45580111 chr14:45580129 . . 0 39 hm5C_associated_SNPs_10518 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:45580123-45580149
64251 chr14 50053582 50053582 1 + C T rs531730938 50053562 + 50053542 50053582 41 GCCTGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGC GCCTGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGT < 41bp 1 0.595293537696096 1 0.450301915407181 experiment 0.809412924607808 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053562 chr14:50053582 . . 0 41 hm5C_associated_SNPs_10519 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053564 + 50053544 50053584 41 CTGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGCGA CTGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGTGA < 41bp 1 0.265296747757994 1 0.232406824827194 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053564 chr14:50053582 . . 0 39 hm5C_associated_SNPs_10520 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053565 + 50053545 50053585 41 TGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGCGAG TGTGAATAGCCACTGCACTCCAGCCTGGGCAACATAGTGAG < 41bp 1 0.355820528957746 1 0.47395920753479 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053565 chr14:50053582 . . 0 38 hm5C_associated_SNPs_10521 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053568 + 50053548 50053588 41 GAATAGCCACTGCACTCCAGCCTGGGCAACATAGCGAGACC GAATAGCCACTGCACTCCAGCCTGGGCAACATAGTGAGACC < 41bp 1 0.211860076829178 1 0.155144959688187 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053568 chr14:50053582 . . 0 35 hm5C_associated_SNPs_10522 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053569 + 50053549 50053589 41 AATAGCCACTGCACTCCAGCCTGGGCAACATAGCGAGACCC AATAGCCACTGCACTCCAGCCTGGGCAACATAGTGAGACCC < 41bp 1 0.644392859754633 1 0.488883167505264 experiment 0.711214280490734 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053569 chr14:50053582 . . 0 34 hm5C_associated_SNPs_10523 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053574 + 50053554 50053594 41 CCACTGCACTCCAGCCTGGGCAACATAGCGAGACCCCGTCT CCACTGCACTCCAGCCTGGGCAACATAGTGAGACCCCGTCT < 41bp 1 0.601400112427909 1 0.0666337013244629 experiment 0.797199775144182 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053574 chr14:50053582 . . 0 29 hm5C_associated_SNPs_10524 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053577 + 50053557 50053597 41 CTGCACTCCAGCCTGGGCAACATAGCGAGACCCCGTCTCTT CTGCACTCCAGCCTGGGCAACATAGTGAGACCCCGTCTCTT < 41bp 1 0.144726631586338 1 0.132319927215576 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053577 chr14:50053582 . . 0 26 hm5C_associated_SNPs_10525 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053587 + 50053567 50053607 41 GCCTGGGCAACATAGCGAGACCCCGTCTCTTTTGAACAATA GCCTGGGCAACATAGTGAGACCCCGTCTCTTTTGAACAATA < 41bp 1 0.10850224754583 1 0.0605081617832184 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053587 chr14:50053582 . . 0 16 hm5C_associated_SNPs_10526 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053588 + 50053568 50053608 41 CCTGGGCAACATAGCGAGACCCCGTCTCTTTTGAACAATAA CCTGGGCAACATAGTGAGACCCCGTCTCTTTTGAACAATAA < 41bp 1 0.186626622207239 1 0.29499340057373 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|28418038;GSE74771;RNA-BisSeq;293T;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053588 chr14:50053582 . . 0 15 hm5C_associated_SNPs_10527 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053589 + 50053569 50053609 41 CTGGGCAACATAGCGAGACCCCGTCTCTTTTGAACAATAAA CTGGGCAACATAGTGAGACCCCGTCTCTTTTGAACAATAAA < 41bp 1 0.0263801915720969 1 0.248982489109039 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053589 chr14:50053582 . . 0 14 hm5C_associated_SNPs_10528 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053590 + 50053570 50053610 41 TGGGCAACATAGCGAGACCCCGTCTCTTTTGAACAATAAAT TGGGCAACATAGTGAGACCCCGTCTCTTTTGAACAATAAAT < 41bp 1 0.0801729781565215 1 0.249546587467194 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|28418038;GSE74771;RNA-BisSeq;293T;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053590 chr14:50053582 . . 0 13 hm5C_associated_SNPs_10529 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053593 + 50053573 50053613 41 GCAACATAGCGAGACCCCGTCTCTTTTGAACAATAAATACG GCAACATAGTGAGACCCCGTCTCTTTTGAACAATAAATACG < 41bp 1 0.0842938170410916 1 0.22471359372139 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053593 chr14:50053582 . . 0 10 hm5C_associated_SNPs_10530 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50053582 50053582 1 + C T rs531730938 50053595 + 50053575 50053615 41 AACATAGCGAGACCCCGTCTCTTTTGAACAATAAATACGTT AACATAGTGAGACCCCGTCTCTTTTGAACAATAAATACGTT < 41bp 1 0.0367587606057822 1 0.288205474615097 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS29 ENSG00000258486 ncRNA_exonic Human other chr14:50053595 chr14:50053582 . . 0 8 hm5C_associated_SNPs_10531 0 0 61 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:50053507-50053596
64251 chr14 50789387 50789387 1 + C T rs142828913 50789391 + 50789371 50789411 41 AAATACAAGATTCAGGCGATCGACGCCACCGACTCTTGTAT AAATACAAGATTCAGGTGATCGACGCCACCGACTCTTGTAT < 41bp 1 0.671794991286447 1 0.306312024593353 experiment 0.656410017427107 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789391 chr14:50789387 nonsynonymous SNV 0.552 3 17 hm5C_associated_SNPs_10532 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:50789357-50789389
64251 chr14 50789387 50789387 1 + C T rs142828913 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATTCAGGTGATCGACGCCACCGACTCTTGTATCATGA < 41bp 1 0.0701681269424274 1 0.118468761444092 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789387 nonsynonymous SNV 0.552 3 12 hm5C_associated_SNPs_10533 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:50789357-50789389
64251 chr14 50789400 50789400 1 + C T rs188991727 50789391 + 50789371 50789411 41 AAATACAAGATTCAGGCGATCGACGCCACCGACTCTTGTAT AAATACAAGATTCAGGCGATCGACGCCACTGACTCTTGTAT < 41bp 1 0.569186193042597 1 0.270759165287018 experiment 0.861627613914806 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789391 chr14:50789400 synonymous SNV . 0 30 hm5C_associated_SNPs_10534 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr14 50789400 50789400 1 + C T rs188991727 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATTCAGGCGATCGACGCCACTGACTCTTGTATCATGA < 41bp 1 0.119315395475262 1 0.163827359676361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789400 synonymous SNV . 0 25 hm5C_associated_SNPs_10535 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr14 52196813 52196813 1 + T C rs115569816 52196805 + 52196785 52196825 41 GCCCAGATCATAATGCAGTGCATTTCCTTAGCCCTTAGAGT GCCCAGATCATAATGCAGTGCATTTCCTCAGCCCTTAGAGT < 41bp 1 0.0925777205147144 1 0.0133806169033051 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FRMD6 ENSG00000139926 UTR3 Human protein_coding chr14:52196805 chr14:52196813 . . 0 29 hm5C_associated_SNPs_10537 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:52196790-52196831
64251 chr14 52471366 52471366 1 + C T rs117652481 52471370 + 52471350 52471390 41 ATGTTCTAGAGATTTACCACCATTGCTTATTGCTTTTTTCT ATGTTCTAGAGATTTATCACCATTGCTTATTGCTTTTTTCT < 41bp 1 0.0839976435601899 1 0.0310723483562469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C14orf166 ENSG00000087302 UTR3 Human protein_coding chr14:52471370 chr14:52471366 . . 0 17 hm5C_associated_SNPs_10538 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:52471091-52471376
64251 chr14 55034579 55034579 1 + G A rs574014794 55034568 + 55034548 55034588 41 GGGGCTGCGGCTCCGCCAAACTTTGGGGCGGGCGGGGCGGG GGGGCTGCGGCTCCGCCAAACTTTGGGGCGGACGGGGCGGG < 41bp 1 0.385127812443004 1 0.495211571455002 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SAMD4A ENSG00000020577 UTR5 Human protein_coding chr14:55034568 chr14:55034579 . . 0 32 hm5C_associated_SNPs_10539 0 0 7 DHX30 POSTAR2 ENCODE chr14:55034577-55034615
64251 chr14 55255823 55255823 1 + C T rs184097143 55255817 + 55255797 55255837 41 GATTTTGTGAGAGCGTAGGTCATCCTCGTAAACATATCAGT GATTTTGTGAGAGCGTAGGTCATCCTTGTAAACATATCAGT < 41bp 1 0.0669674578894022 1 0.0400213897228241 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4A ENSG00000020577 UTR3 Human protein_coding chr14:55255817 chr14:55255823 . . 0 27 hm5C_associated_SNPs_10540 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr14:55255815-55255836
64251 chr14 55531358 55531358 1 + C T rs149884572 55531340 + 55531320 55531360 41 TTTTTCTATTGCAGTCTTACCATTAAGTTAACAATGGACGA TTTTTCTATTGCAGTCTTACCATTAAGTTAACAATGGATGA < 41bp 1 0.207656110519747 1 0.203903883695602 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAPK1IP1L ENSG00000168175 UTR3 Human protein_coding chr14:55531340 chr14:55531358 . . 0 39 hm5C_associated_SNPs_10541 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:55531270-55531367
64251 chr14 55818517 55818517 1 + T A rs1045002 55818536 + 55818516 55818556 41 ATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTT AATTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTT < 41bp 1 0.310914832385992 1 0.109865456819534 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818536 chr14:55818517 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_10542 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:55818504-55818528
64251 chr14 56150858 56150858 1 + G A rs377030594 56150859 + 56150839 56150879 41 TCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCAA TCATTTGAGGATAAAAAAGACATTGTATTATATTTTGCCAA < 41bp 1 0.17037040424426 1 0.114988327026367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150859 chr14:56150858 . . 0 20 hm5C_associated_SNPs_10543 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:56150820-56150860
64251 chr14 56150861 56150861 1 + T C rs571976451 56150859 + 56150839 56150879 41 TCATTTGAGGATAAAAAAGGCATTGTATTATATTTTGCCAA TCATTTGAGGATAAAAAAGGCACTGTATTATATTTTGCCAA < 41bp 1 0.33483950945778 1 0.129716724157333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KTN1 ENSG00000126777 UTR3 Human protein_coding chr14:56150859 chr14:56150861 . . 0 23 hm5C_associated_SNPs_10544 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:56150823-56150982
64251 chr14 57858101 57858101 1 + C G rs537688680 57858089 + 57858069 57858109 41 GTACACTCGGGCGAGAGGCCCCCTCACTCCCTCTCTAGTAA GTACACTCGGGCGAGAGGCCCCCTCACTCCCTGTCTAGTAA < 41bp 1 0.0900636995389523 1 0.0607948899269104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA30 ENSG00000139977 CDS Human protein_coding chr14:57858089 chr14:57858101 synonymous SNV . 0 33 hm5C_associated_SNPs_10553 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:57858100-57858120
64251 chr14 59951278 59951278 1 + T C rs10140007 59951294 + 59951274 59951314 41 CTAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTG CTAGCGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTG < 41bp 1 0.0613231347400579 1 0.162271201610565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59951294 chr14:59951278 . . 0 5 hm5C_associated_SNPs_10555 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59951254-59951280
64251 chr14 59951278 59951278 1 + T C rs10140007 59951295 + 59951275 59951315 41 TAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTGA TAGCGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTGA < 41bp 1 0.70119007223107 1 0.162023484706879 experiment 0.597619855537861 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59951295 chr14:59951278 . . 0 4 hm5C_associated_SNPs_10556 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59951254-59951280
64251 chr14 60591887 60591887 1 + G A rs167437 60591886 + 60591866 60591906 41 GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTC GGTCATATATTGAGAGTTTACAGTGGTGTTTTGCCTTGGTC < 41bp 1 0.730081503452326 1 0.569202661514282 experiment 0.539836993095347 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591886 chr14:60591887 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_10558 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr14:60591876-60591897
64251 chr14 60592491 60592491 1 + A C rs145320435 60592489 + 60592469 60592509 41 TGATGAAAAGTGGAAGGAAGCAATTTTACAAGAAAAGCCAT TGATGAAAAGTGGAAGGAAGCACTTTTACAAGAAAAGCCAT < 41bp 1 0.348595551509296 1 0.11495178937912 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60592489 chr14:60592491 nonsynonymous SNV 0.928 1 23 hm5C_associated_SNPs_10559 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr14:60592471-60592501
64251 chr14 61201634 61201634 1 + C T rs4151150 61201633 + 61201613 61201653 41 CACCAAATATCGGAACCCCTCCTTGAAGCTGATGGTGAATG CACCAAATATCGGAACCCCTCTTTGAAGCTGATGGTGAATG < 41bp 1 0.283519893866961 1 0.135496228933334 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61201633 chr14:61201634 synonymous SNV . 0 22 hm5C_associated_SNPs_10560 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:61201580-61201640
64251 chr14 61275053 61275053 1 + G C rs148083759 61275055 + 61275035 61275075 41 TAATGCAGTTTTCAACTTGACCAACAATGTGGATTTGGACA TAATGCAGTTTTCAACTTCACCAACAATGTGGATTTGGACA < 41bp 1 0.074333585822019 1 0.0566551089286804 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61275055 chr14:61275053 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_10561 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:61275040-61275060
64251 chr14 61275053 61275053 1 + G C rs148083759 61275056 + 61275036 61275076 41 AATGCAGTTTTCAACTTGACCAACAATGTGGATTTGGACAA AATGCAGTTTTCAACTTCACCAACAATGTGGATTTGGACAA < 41bp 1 0.756158934393962 1 0.372649282217026 experiment 0.487682131212076 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61275056 chr14:61275053 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_10562 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:61275040-61275060
64251 chr14 61346449 61346449 1 + G A rs188250258 61346465 + 61346445 61346485 41 CACTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA CACTAGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA < 41bp 1 0.587469045624825 1 0.68172687292099 experiment 0.825061908750349 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346465 chr14:61346449 synonymous SNV . 0 5 hm5C_associated_SNPs_10563 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:61346433-61346464
64251 chr14 62203623 62203623 1 + G A rs142179458 62203638 + 62203618 62203658 41 AGCACGACTTGATTTTCTCCCTTCAACAAACAGAATGTGTC AGCACAACTTGATTTTCTCCCTTCAACAAACAGAATGTGTC < 41bp 1 0.323200944170102 1 0.696730971336365 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout HIF1A ENSG00000100644 CDS Human protein_coding chr14:62203638 chr14:62203623 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_10564 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr14:62203606-62203631
64251 chr14 64687305 64687305 1 + G A rs34820571 64687313 + 64687293 64687333 41 GCAGCACAGGGCGCAGTGGACAGCTGGAGAGGGGGCTTACG GCAGCACAGGGCACAGTGGACAGCTGGAGAGGGGGCTTACG < 41bp 1 0.299587016301069 1 0.511377155780792 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64687313 chr14:64687305 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_10567 2 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:64687300-64687320
64251 chr14 64690002 64690002 1 + T C rs77065534 64690010 + 64689990 64690030 41 TGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTA TGGAGAAGACTGCATTGAAGCTGAAGAAAAGGTGCATGTTA < 41bp 1 0.29169210973563 1 0.429901331663132 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64690010 chr14:64690002 synonymous SNV . 0 13 hm5C_associated_SNPs_10569 1 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:64689991-64690006
64251 chr14 64692544 64692544 1 + G A rs79269713 64692531 + 64692511 64692551 41 GTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTGGTTTGTT GTTTCCTGAAGAGCCAAGCACTTTGTGAATTCTAGTTTGTT < 41bp 1 0.0705876071926535 1 0.0339835584163666 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNE2 ENSG00000054654 UTR3 Human protein_coding chr14:64692531 chr14:64692544 . . 0 34 hm5C_associated_SNPs_10570 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64692509-64692547
64251 chr14 65209909 65209909 1 + G A rs17180132 65209911 + 65209891 65209931 41 ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTGCTCCAAGTA ACCTTCAGCTGGCCCGACATCCGTGAGCTCTGCTCCAAGTA < 41bp 1 0.315441050814909 1 0.302224040031433 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209911 chr14:65209909 nonsynonymous SNV 0.509 4 19 hm5C_associated_SNPs_10571 0 0 1 DDX55 POSTAR2 ENCODE chr14:65209866-65209928
64251 chr14 67786979 67786979 1 + G A rs145470385 67786966 + 67786946 67786986 41 GATTATGACAACGAGGAGATCTTAACCTATGAGGAAATGTC GATTATGACAACGAGGAGATCTTAACCTATGAGAAAATGTC < 41bp 1 0.176829731541721 1 0.154739439487457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPP5 ENSG00000072415 CDS Human protein_coding chr14:67786966 chr14:67786979 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_10572 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:67786967-67787003
64251 chr14 70181254 70181254 1 + G A rs76527219 70181265 + 70181245 70181285 41 CTTGGGCCTGCTGGGTCTGTCAGCTCTCGGAATAGGGACAG CTTGGGCCTACTGGGTCTGTCAGCTCTCGGAATAGGGACAG < 41bp 1 0.70098807399727 1 0.366763055324554 experiment 0.59802385200546 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SUSD6 ENSG00000100647 UTR3 Human protein_coding chr14:70181265 chr14:70181254 . . 0 10 hm5C_associated_SNPs_10575 0 0 1 SUB1 POSTAR2 ENCODE chr14:70181215-70181263
64251 chr14 70234042 70234042 1 + G A rs370707807 70234025 + 70234005 70234045 41 GGATCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCGGCC GGATCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCAGCC < 41bp 1 0.1987052445664 1 0.047804981470108 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234025 chr14:70234042 . . 0 38 hm5C_associated_SNPs_10576 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 70234042 70234042 1 + G A rs370707807 70234026 + 70234006 70234046 41 GATCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCGGCCG GATCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCAGCCG < 41bp 1 0.208962166149948 1 0.137945294380188 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234026 chr14:70234042 . . 0 37 hm5C_associated_SNPs_10577 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 70234042 70234042 1 + G A rs370707807 70234028 + 70234008 70234048 41 TCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCGGCCGGG TCGAGGCTTCTTCATGGCCGCTCAGATCGTGAGCAGCCGGG < 41bp 1 0.300358863163501 1 0.176522433757782 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234028 chr14:70234042 . . 0 35 hm5C_associated_SNPs_10578 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 70234042 70234042 1 + G A rs370707807 70234030 + 70234010 70234050 41 GAGGCTTCTTCATGGCCGCTCAGATCGTGAGCGGCCGGGGC GAGGCTTCTTCATGGCCGCTCAGATCGTGAGCAGCCGGGGC < 41bp 1 0.22881067735725 1 0.37484335899353 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234030 chr14:70234042 . . 0 33 hm5C_associated_SNPs_10579 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 70234042 70234042 1 + G A rs370707807 70234041 + 70234021 70234061 41 ATGGCCGCTCAGATCGTGAGCGGCCGGGGCTGCTCTCTTTG ATGGCCGCTCAGATCGTGAGCAGCCGGGGCTGCTCTCTTTG < 41bp 1 0.38783503085093 1 0.0404787361621857 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234041 chr14:70234042 . . 0 22 hm5C_associated_SNPs_10580 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 70234042 70234042 1 + G A rs370707807 70234044 + 70234024 70234064 41 GCCGCTCAGATCGTGAGCGGCCGGGGCTGCTCTCTTTGCGG GCCGCTCAGATCGTGAGCAGCCGGGGCTGCTCTCTTTGCGG < 41bp 1 0.607174800697769 1 0.897131204605103 experiment 0.785650398604463 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control LOC100289511 ENSG00000100650 UTR5 Human protein_coding chr14:70234044 chr14:70234042 . . 0 19 hm5C_associated_SNPs_10581 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234038-70234064
64251 chr14 71444593 71444593 1 + C T rs113064017 71444573 + 71444553 71444593 41 CTTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAAC CTTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAAT < 41bp 1 0.194522279023456 1 0.435135900974274 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444573 chr14:71444593 synonymous SNV . 0 41 hm5C_associated_SNPs_10582 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:71444569-71444598
64251 chr14 71444593 71444593 1 + C T rs113064017 71444574 + 71444554 71444594 41 TTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAACA TTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAATA < 41bp 1 0.551046513314799 1 0.643979549407959 experiment 0.897906973370403 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444574 chr14:71444593 synonymous SNV . 0 40 hm5C_associated_SNPs_10583 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:71444569-71444598
64251 chr14 73429721 73429721 1 + A G rs191124234 73429702 + 73429682 73429722 41 GGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGAG GGTATAGCTCAGGGGTAGAGCATTTGACTGCAGATCAAGGG < 41bp 1 0.142942526621963 1 0.121696174144745 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429702 chr14:73429721 . . 0 40 hm5C_associated_SNPs_10586 0 0 26 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429721 73429721 1 + A G rs191124234 73429712 + 73429692 73429732 41 AGGGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTT AGGGGTAGAGCATTTGACTGCAGATCAAGGGGTCCCCGGTT < 41bp 1 0.448828541567699 1 0.784629702568054 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429712 chr14:73429721 . . 0 30 hm5C_associated_SNPs_10587 0 0 26 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429721 73429721 1 + A G rs191124234 73429726 + 73429706 73429746 41 TGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCC TGACTGCAGATCAAGGGGTCCCCGGTTCAAATCCGGGTGCC < 41bp 1 0.426415168620757 1 0.123189955949783 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429726 chr14:73429721 . . 0 16 hm5C_associated_SNPs_10588 0 0 26 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429721 73429721 1 + A G rs191124234 73429733 + 73429713 73429753 41 AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTTCC AGATCAAGGGGTCCCCGGTTCAAATCCGGGTGCCCCCTTCC < 41bp 1 0.290763284045112 1 0.204787909984589 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429733 chr14:73429721 . . 0 9 hm5C_associated_SNPs_10589 0 0 26 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429736 73429736 1 + A G rs561490940 73429726 + 73429706 73429746 41 TGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCC TGACTGCAGATCAAGAGGTCCCCGGTTCAAGTCCGGGTGCC < 41bp 1 0.364692909691536 1 0.19769674539566 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429726 chr14:73429736 . . 0 31 hm5C_associated_SNPs_10590 0 0 32 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429736 73429736 1 + A G rs561490940 73429733 + 73429713 73429753 41 AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTTCC AGATCAAGAGGTCCCCGGTTCAAGTCCGGGTGCCCCCTTCC < 41bp 1 0.479745624155564 1 0.218790650367737 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429733 chr14:73429736 . . 0 24 hm5C_associated_SNPs_10591 0 0 32 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429736 73429736 1 + A G rs561490940 73429745 + 73429725 73429765 41 CCCCGGTTCAAATCCGGGTGCCCCCTTCCCGGATGTTTTCT CCCCGGTTCAAGTCCGGGTGCCCCCTTCCCGGATGTTTTCT < 41bp 1 0.0507262955475306 1 0.0387912690639496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429745 chr14:73429736 . . 0 12 hm5C_associated_SNPs_10592 0 0 32 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73429736 73429736 1 + A G rs561490940 73429748 + 73429728 73429768 41 CGGTTCAAATCCGGGTGCCCCCTTCCCGGATGTTTTCTCAT CGGTTCAAGTCCGGGTGCCCCCTTCCCGGATGTTTTCTCAT < 41bp 1 0.01197348070329 1 0.0575312376022339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF4;ZFYVE1 ENSG00000239544 downstream Human processed_pseudogene chr14:73429748 chr14:73429736 . . 0 9 hm5C_associated_SNPs_10593 0 0 32 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:73429700-73429740
64251 chr14 73577709 73577709 1 + C T rs150992885 73577703 + 73577683 73577723 41 CTGAAACCTACTCTGAGGCCCATCAGCTCTGCTCCATCTGT CTGAAACCTACTCTGAGGCCCATCAGTTCTGCTCCATCTGT < 41bp 1 0.396832000091653 1 0.102489769458771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73577703 chr14:73577709 synonymous SNV . 0 27 hm5C_associated_SNPs_10594 0 0 38 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:73577639-73577719
64251 chr14 73603190 73603190 1 + G A rs199689757 73603203 + 73603183 73603223 41 ACAGGCAGCTCCGGGGTCCGCGGTTTCACATCGGAAACAAA ACAGGCAACTCCGGGGTCCGCGGTTTCACATCGGAAACAAA < 41bp 1 0.394333051352847 1 0.247153162956238 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSEN1 ENSG00000080815 UTR5 Human protein_coding chr14:73603203 chr14:73603190 . . 0 8 hm5C_associated_SNPs_10595 0 0 3 DDX3X POSTAR2 ENCODE chr14:73603158-73603208
64251 chr14 73637512 73637512 1 + A G rs200824179 73637529 + 73637509 73637549 41 ACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT ACAGTAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT < 41bp 1 0.674167786139577 1 0.319849252700806 experiment 0.651664427720847 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637529 chr14:73637512 nonsynonymous SNV 0.463 1 4 hm5C_associated_SNPs_10596 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr14 73637512 73637512 1 + A G rs200824179 73637531 + 73637511 73637551 41 AATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG AGTAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG < 41bp 1 0.665393670151478 1 0.243122190237045 experiment 0.669212659697045 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637531 chr14:73637512 nonsynonymous SNV 0.463 1 2 hm5C_associated_SNPs_10597 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr14 73958812 73958812 1 + T A rs3813563 73958826 + 73958806 73958846 41 CCCGAGTCCCAACCGAGGAACTGGCTCTGACATCCAGCCCC CCCGAGACCCAACCGAGGAACTGGCTCTGACATCCAGCCCC < 41bp 1 0.521922981715228 1 0.22677755355835 experiment 0.956154036569543 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RIOX1 ENSG00000170468;ENSG00000255242 ncRNA_exonic Human other chr14:73958826 chr14:73958812 . 0.499 0 7 hm5C_associated_SNPs_10598 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:73958768-73958853
64251 chr14 74424938 74424938 1 + T C rs3180946 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCACATTAC < 41bp 1 0.460404331719515 1 0.155064880847931 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424938 synonymous SNV . 0 36 hm5C_associated_SNPs_10599 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:74424911-74424958
64251 chr14 75202373 75202373 1 + A G rs77394285 75202392 + 75202372 75202412 41 AAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTA AGGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTA < 41bp 1 0.182667364151788 1 0.0802201330661774 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202392 chr14:75202373 . . 0 2 hm5C_associated_SNPs_10600 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:75202335-75202374
64251 chr14 75202373 75202373 1 + A G rs77394285 75202393 + 75202373 75202413 41 AGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAC GGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAC < 41bp 1 0.593146471063242 1 0.249467760324478 experiment 0.813707057873516 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202393 chr14:75202373 . . 0 1 hm5C_associated_SNPs_10601 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:75202335-75202374
64251 chr14 75202629 75202629 1 + G A rs144404139 75202646 + 75202626 75202666 41 GACGGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCG GACAGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCG < 41bp 1 0.797529920118474 1 0.366227269172668 experiment 0.404940159763053 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202646 chr14:75202629 . . 0 4 hm5C_associated_SNPs_10602 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:75202552-75202637
64251 chr14 75202630 75202630 1 + G A rs147834292 75202646 + 75202626 75202666 41 GACGGAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCG GACGAAGTCTCGCTCTGTCACCAGGCTGGAGTGCAGTGGCG < 41bp 1 0.777587829224269 1 0.436562269926071 experiment 0.444824341551462 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75202646 chr14:75202630 . . 0 5 hm5C_associated_SNPs_10603 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:75202552-75202637
64251 chr14 75247245 75247245 1 + A G rs74566256 75247246 + 75247226 75247266 41 CTCAGTTACAGCAGATTCTACAACAGTATCAGCAGATTATA CTCAGTTACAGCAGATTCTGCAACAGTATCAGCAGATTATA < 41bp 1 0.39776916346941 1 0.0401936769485474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75247246 chr14:75247245 synonymous SNV . 0 20 hm5C_associated_SNPs_10604 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:75247235-75247256
64251 chr14 75359607 75359607 1 + G A rs201721137 75359614 + 75359594 75359634 41 AACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATA AACCTACAGCAGCAGCAGTTCCTCCCCCTGCAGCACCCATA < 41bp 1 0.10134767706142 1 0.0666942596435547 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359614 chr14:75359607 synonymous SNV . 0 14 hm5C_associated_SNPs_10605 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:75359593-75359623
64251 chr14 75359670 75359670 1 + G A rs2230237 75359687 + 75359667 75359707 41 ACAGCCTCCTTCTGGCAAACCTGGTAGGCTTCCAACTCCCA ACAACCTCCTTCTGGCAAACCTGGTAGGCTTCCAACTCCCA < 41bp 1 0.694365416993599 1 0.0704642534255981 experiment 0.611269166012802 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359687 chr14:75359670 synonymous SNV . 0 4 hm5C_associated_SNPs_10606 0 0 3 BUD13 POSTAR2 ENCODE chr14:75359641-75359704
64251 chr14 75369890 75369890 1 + C G rs141856572 75369877 + 75369857 75369897 41 AGCACATCATGGCAGTGGGACCAAGCGTGGTCCCGAGGAAG AGCACATCATGGCAGTGGGACCAAGCGTGGTCCGGAGGAAG < 41bp 1 0.210999752096462 1 0.209879040718079 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DLST ENSG00000119689 UTR3 Human protein_coding chr14:75369877 chr14:75369890 . . 0 34 hm5C_associated_SNPs_10607 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:75369840-75369895
64251 chr14 75369890 75369890 1 + C G rs141856572 75369878 + 75369858 75369898 41 GCACATCATGGCAGTGGGACCAAGCGTGGTCCCGAGGAAGG GCACATCATGGCAGTGGGACCAAGCGTGGTCCGGAGGAAGG < 41bp 1 0.713815957836527 1 0.470102816820145 experiment 0.572368084326946 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DLST ENSG00000119689 UTR3 Human protein_coding chr14:75369878 chr14:75369890 . . 0 33 hm5C_associated_SNPs_10608 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:75369840-75369895
64251 chr14 75369948 75369948 1 + C G rs75210798 75369935 + 75369915 75369955 41 GACTAGGGAAGGGAGGTCTCCTCTAGACTGACTCACATTGC GACTAGGGAAGGGAGGTCTCCTCTAGACTGACTGACATTGC < 41bp 1 0.799006618096452 1 0.491639673709869 experiment 0.401986763807096 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DLST ENSG00000119689 UTR3 Human protein_coding chr14:75369935 chr14:75369948 . . 0 34 hm5C_associated_SNPs_10609 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:75369940-75369969
64251 chr14 75904660 75904660 1 + A G rs3625 75904659 + 75904639 75904679 41 ATCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAGGGCT ATCCCGGACCCTTCGGTGACCGCAGGCTCCCTGCCAGGGCT < 41bp 1 0.794908810235319 1 0.64088374376297 experiment 0.410182379529361 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JDP2 ENSG00000140044 CDS Human protein_coding chr14:75904659 chr14:75904660 nonsynonymous SNV 0.339 0 22 hm5C_associated_SNPs_10614 0 0 1 DDX3X POSTAR2 ENCODE chr14:75904600-75904756
64251 chr14 76127613 76127613 1 + A G rs114790051 76127618 + 76127598 76127638 41 CTTGTTGGTTGTTGTAGTAACCGGGGAAGCAGCCGTCGGCG CTTGTTGGTTGTTGTGGTAACCGGGGAAGCAGCCGTCGGCG < 41bp 1 0.748494348307362 1 0.76026976108551 experiment 0.503011303385276 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTLL5 ENSG00000119685 UTR5 Human protein_coding chr14:76127618 chr14:76127613 . . 0 16 hm5C_associated_SNPs_10618 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:76127613-76127614
64251 chr14 76618278 76618278 1 + C A rs576123914 76618282 + 76618262 76618302 41 GTCAGAGAGGGAAGCCCCGGCGGTGAGAGTCGGCCCAAAAA GTCAGAGAGGGAAGCCACGGCGGTGAGAGTCGGCCCAAAAA < 41bp 1 0.783775580743748 1 0.629407167434692 experiment 0.432448838512504 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPATCH2L ENSG00000089916 UTR5 Human protein_coding chr14:76618282 chr14:76618278 . . 0 17 hm5C_associated_SNPs_10619 0 0 1 NCBP2 POSTAR2 ENCODE chr14:76618261-76618302
64251 chr14 76618283 76618283 1 + G T rs561794953 76618282 + 76618262 76618302 41 GTCAGAGAGGGAAGCCCCGGCGGTGAGAGTCGGCCCAAAAA GTCAGAGAGGGAAGCCCCGGCTGTGAGAGTCGGCCCAAAAA < 41bp 1 0.689894866858333 1 0.25553223490715 experiment 0.620210266283334 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPATCH2L ENSG00000089916 UTR5 Human protein_coding chr14:76618282 chr14:76618283 . . 0 22 hm5C_associated_SNPs_10620 0 0 1 NCBP2 POSTAR2 ENCODE chr14:76618261-76618302
64251 chr14 76638268 76638268 1 + T G rs144422821 76638267 + 76638247 76638287 41 TAATCTTCTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAG TAATCTTCTGCCCAAGTGGGCGCCTGATCATTGTTCTGAAG < 41bp 1 0.305587955474928 1 0.217246294021606 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76638267 chr14:76638268 synonymous SNV . 0 22 hm5C_associated_SNPs_10621 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr14:76638194-76638323
64251 chr14 78183928 78183928 1 + A G rs17106262 78183914 + 78183894 78183934 41 AAGATTTTTGAGACTGCAGCCTATTAATAAAGTTAACATAA AAGATTTTTGAGACTGCAGCCTATTAATAAAGTTGACATAA < 41bp 1 0.170483763550284 1 0.0648556053638458 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLIRP ENSG00000119705 UTR3 Human protein_coding chr14:78183914 chr14:78183928 . . 0 35 hm5C_associated_SNPs_10622 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:78183840-78183928
64251 chr14 89078640 89078640 1 + T C rs546453008 89078634 + 89078614 89078654 41 AGTGAATTTAGTTTGAAAAGCATGATTATACAGGCCTCTCA AGTGAATTTAGTTTGAAAAGCATGATCATACAGGCCTCTCA < 41bp 1 0.618577651409147 1 0.159761130809784 experiment 0.762844697181706 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H14 ENSG00000100722 UTR3 Human protein_coding chr14:89078634 chr14:89078640 . . 0 27 hm5C_associated_SNPs_10623 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:89078620-89078640
64251 chr14 89291027 89291027 1 + G A rs7145692 89291047 + 89291027 89291067 41 GCCTTCGCTGGCCGCACCGGCAGCCATGAGCTCGGAGATGG ACCTTCGCTGGCCGCACCGGCAGCCATGAGCTCGGAGATGG < 41bp 1 0.577361516283031 1 0.104230642318726 experiment 0.845276967433938 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTC8 ENSG00000165533 UTR5 Human protein_coding chr14:89291047 chr14:89291027 . . 0 1 hm5C_associated_SNPs_10624 3 0 2 DDX3X POSTAR2 ENCODE chr14:89291012-89291132
64251 chr14 90429743 90429743 1 + G A rs35114462 90429750 + 90429730 90429770 41 GCAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAG GCAGTGATGATGAACTGCAACCAGAAATGCCGCAGAAGCAG < 41bp 1 0.663144179848942 1 0.40285724401474 experiment 0.673711640302117 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429750 chr14:90429743 synonymous SNV . 0 14 hm5C_associated_SNPs_10625 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr14 90429743 90429743 1 + G A rs35114462 90429751 + 90429731 90429771 41 CAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAGG CAGTGATGATGAACTGCAACCAGAAATGCCGCAGAAGCAGG < 41bp 1 0.697344956296872 1 0.886076748371124 experiment 0.605310087406256 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429751 chr14:90429743 synonymous SNV . 0 13 hm5C_associated_SNPs_10626 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr14 90429749 90429749 1 + A G rs3825663 90429750 + 90429730 90429770 41 GCAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAG GCAGTGATGATGAGCTGCAGCCAGAAATGCCGCAGAAGCAG < 41bp 1 0.686901189586981 1 0.433761835098267 experiment 0.626197620826037 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429750 chr14:90429749 synonymous SNV . 0 20 hm5C_associated_SNPs_10627 1 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr14 90429749 90429749 1 + A G rs3825663 90429751 + 90429731 90429771 41 CAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAGG CAGTGATGATGAGCTGCAGCCAGAAATGCCGCAGAAGCAGG < 41bp 1 0.702079521942366 1 0.886929035186768 experiment 0.595840956115267 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429751 chr14:90429749 synonymous SNV . 0 19 hm5C_associated_SNPs_10628 1 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr14 90429760 90429760 1 + C G rs35455108 90429750 + 90429730 90429770 41 GCAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAG GCAGTGATGATGAGCTGCAACCAGAAATGCGGCAGAAGCAG < 41bp 1 0.698629306950074 1 0.531387269496918 experiment 0.602741386099853 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429750 chr14:90429760 nonsynonymous SNV 0.000 0 31 hm5C_associated_SNPs_10629 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:90429740-90429773
64251 chr14 90429760 90429760 1 + C G rs35455108 90429751 + 90429731 90429771 41 CAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAGG CAGTGATGATGAGCTGCAACCAGAAATGCGGCAGAAGCAGG < 41bp 1 0.747858452666334 1 0.872531771659851 experiment 0.504283094667332 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429751 chr14:90429760 nonsynonymous SNV 0.000 0 30 hm5C_associated_SNPs_10630 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:90429740-90429773
64251 chr14 90433762 90433762 1 + T C rs148474327 90433764 + 90433744 90433784 41 AAACAGTATCCACCAGAGTTCAGGTGAGTTCCTCAGGGTGA AAACAGTATCCACCAGAGCTCAGGTGAGTTCCTCAGGGTGA < 41bp 1 0.617412904782201 1 0.703882336616516 experiment 0.765174190435599 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90433764 chr14:90433762 nonsynonymous SNV 0.985 2 19 hm5C_associated_SNPs_10631 0 0 5 BUD13 POSTAR2 ENCODE chr14:90433690-90433767
64251 chr14 92630326 92630326 1 + G A rs1126949 92630331 + 92630311 92630351 41 TGATCCGCCCGCCTGGGCCTCCCAAAGTGCTGGGATTACAG TGATCCGCCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAG < 41bp 1 0.536950020012993 1 0.0975462794303894 experiment 0.926099959974015 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CPSF2 ENSG00000165934 UTR3 Human protein_coding chr14:92630331 chr14:92630326 . . 0 16 hm5C_associated_SNPs_10632 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:92630276-92630337
64251 chr14 92630326 92630326 1 + G A rs1126949 92630332 + 92630312 92630352 41 GATCCGCCCGCCTGGGCCTCCCAAAGTGCTGGGATTACAGG GATCCGCCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAGG < 41bp 1 0.671910960317476 1 0.192448526620865 experiment 0.656178079365048 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CPSF2 ENSG00000165934 UTR3 Human protein_coding chr14:92630332 chr14:92630326 . . 0 15 hm5C_associated_SNPs_10633 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:92630276-92630337
64251 chr14 92630326 92630326 1 + G A rs1126949 92630333 + 92630313 92630353 41 ATCCGCCCGCCTGGGCCTCCCAAAGTGCTGGGATTACAGGC ATCCGCCCGCCTGAGCCTCCCAAAGTGCTGGGATTACAGGC < 41bp 1 0.752296021830243 1 0.509401559829712 experiment 0.495407956339513 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CPSF2 ENSG00000165934 UTR3 Human protein_coding chr14:92630333 chr14:92630326 . . 0 14 hm5C_associated_SNPs_10634 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:92630276-92630337
64251 chr14 93277918 93277918 1 + A G rs35865539 93277898 + 93277878 93277918 41 TATAAAAATTTGTCACAGAGCGAGTTTGCTGCACGCCTTAA TATAAAAATTTGTCACAGAGCGAGTTTGCTGCACGCCTTAG < 41bp 1 0.565480538640083 1 0.223114848136902 experiment 0.869038922719835 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93277898 chr14:93277918 nonsynonymous SNV 0.999 0 41 hm5C_associated_SNPs_10637 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:93277917-93277918
64251 chr14 93299522 93299522 1 + A G rs75743171 93299518 + 93299498 93299538 41 AGTCTGAGTTAGAAAATCGACTCCATCAGCTAACAGAGACT AGTCTGAGTTAGAAAATCGACTCCGTCAGCTAACAGAGACT < 41bp 1 0.557630097798591 1 0.335511952638626 experiment 0.884739804402817 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299518 chr14:93299522 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_10638 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93299508-93299540
64251 chr14 93693948 93693948 1 + A C rs562807926 93693953 + 93693933 93693973 41 GTTTTCTCTAGGCCCAACCTCCAGAGTAGCCAGGACTGATG GTTTTCTCTAGGCCCCACCTCCAGAGTAGCCAGGACTGATG < 41bp 1 0.781507622939917 1 0.870122909545898 experiment 0.436984754120167 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93693953 chr14:93693948 . . 0 16 hm5C_associated_SNPs_10639 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:93693916-93693948
64251 chr14 94568224 94568224 1 + C G rs117094493 94568211 + 94568191 94568231 41 CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCGCATCCT CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCGGCATCCT < 41bp 1 0.796080413723892 1 0.350443303585052 experiment 0.407839172552217 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568211 chr14:94568224 nonsynonymous SNV 0.000 0 34 hm5C_associated_SNPs_10640 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr14 95059381 95059381 1 + A G rs7070 95059396 + 95059376 95059416 41 AGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTGAATT AGAGTGTCAGTTGCAGGTGCCAATGACTAACTTTTTGAATT < 41bp 1 0.251075492945406 1 0.177164703607559 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINA5 ENSG00000188488 UTR3 Human protein_coding chr14:95059396 chr14:95059381 . . 0 6 hm5C_associated_SNPs_10641 0 0 2 LARP4 POSTAR2 ENCODE chr14:95059369-95059405
64251 chr14 95078780 95078780 1 + G A rs557831303 95078782 + 95078762 95078802 41 CTACATCCAGCTCCCTGAGGCAGGTAATCCATGATGTTTTA CTACATCCAGCTCCCTGAAGCAGGTAATCCATGATGTTTTA < 41bp 1 0.395601302428612 1 0.613594770431519 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control SERPINA3 ENSG00000196136 CDS Human protein_coding chr14:95078782 chr14:95078780 synonymous SNV . 0 19 hm5C_associated_SNPs_10642 0 0 4 DDX3X POSTAR2 ENCODE chr14:95078741-95078784
64251 chr14 97018864 97018864 1 + C G rs35861551 97018858 + 97018838 97018878 41 TTGACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGA TTGACAGCTCTCAATGACAGCAGCCTGGACTTGTCTATGGA < 41bp 1 0.26481315546889 1 0.169214189052582 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97018858 chr14:97018864 synonymous SNV . 0 27 hm5C_associated_SNPs_10645 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:97018824-97018879
64251 chr14 99947777 99947777 1 + C G rs149437057 99947768 + 99947748 99947788 41 CATTCCATATACAAGATGGCCGCAGTCGGCAAGGAGAGACG CATTCCATATACAAGATGGCCGCAGTCGGGAAGGAGAGACG < 41bp 1 0.520697807869971 1 0.405896693468094 experiment 0.958604384260059 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNK ENSG00000090061 UTR5 Human protein_coding chr14:99947768 chr14:99947777 . . 0 30 hm5C_associated_SNPs_10646 0 0 1 GRWD1 POSTAR2 ENCODE chr14:99947776-99947820
64251 chr14 99947777 99947777 1 + C G rs149437057 99947770 + 99947750 99947790 41 TTCCATATACAAGATGGCCGCAGTCGGCAAGGAGAGACGTC TTCCATATACAAGATGGCCGCAGTCGGGAAGGAGAGACGTC < 41bp 1 0.218488701390326 1 0.199762254953384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNK ENSG00000090061 UTR5 Human protein_coding chr14:99947770 chr14:99947777 . . 0 28 hm5C_associated_SNPs_10647 0 0 1 GRWD1 POSTAR2 ENCODE chr14:99947776-99947820
64251 chr14 100594957 100594957 1 + A C rs565113043 100594949 + 100594929 100594969 41 CCCCCCACCCCCAGTCCCACCTCCACCCACTGGGGCTACCC CCCCCCACCCCCAGTCCCACCTCCACCCCCTGGGGCTACCC < 41bp 1 0.688320900745682 1 0.916184663772583 experiment 0.623358198508637 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EVL ENSG00000196405 CDS Human protein_coding chr14:100594949 chr14:100594957 nonsynonymous SNV 0.870 0 29 hm5C_associated_SNPs_10649 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:100594956-100594979
64251 chr14 100610127 100610127 1 + A G rs58103906 100610126 + 100610106 100610146 41 GCCCATCCGGCGACAGAGGACAGCCAGAAGCCCAGCCAGCC GCCCATCCGGCGACAGAGGACGGCCAGAAGCCCAGCCAGCC < 41bp 1 0.421921527966578 1 0.482740074396133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EVL ENSG00000196405 UTR3 Human protein_coding chr14:100610126 chr14:100610127 . . 0 22 hm5C_associated_SNPs_10650 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:100610120-100610140
64251 chr14 100706186 100706186 1 + A G rs371252181 100706200 + 100706180 100706220 41 CGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAG CGGGCAGCAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAG < 41bp 1 0.709839205973117 1 0.818262338638306 experiment 0.580321588053767 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YY1 ENSG00000100811 CDS Human protein_coding chr14:100706200 chr14:100706186 nonsynonymous SNV 0.984 0 7 hm5C_associated_SNPs_10651 0 0 2 GRWD1 POSTAR2 ENCODE chr14:100706109-100706187
64251 chr14 100996312 100996312 1 + T A rs13065 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TAACACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG < 41bp 1 0.17637792061426 1 0.75983077287674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996312 stopgain 0.952 0 3 hm5C_associated_SNPs_10655 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr14 101296084 101296084 1 + C G rs183426957 101296099 + 101296079 101296119 41 TGCATCAGGTAGGGGCTTTGCAGAGACCATCGACGGGCTGA TGCATGAGGTAGGGGCTTTGCAGAGACCATCGACGGGCTGA < 41bp 1 0.644412437505902 1 0.859982073307037 experiment 0.711175124988196 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MEG3 ENSG00000214548 ncRNA_exonic Human lincRNA chr14:101296099 chr14:101296084 . . 0 6 hm5C_associated_SNPs_10656 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101296080-101296100
64251 chr14 101296097 101296097 1 + T C rs3087916 101296099 + 101296079 101296119 41 TGCATCAGGTAGGGGCTTTGCAGAGACCATCGACGGGCTGA TGCATCAGGTAGGGGCTTCGCAGAGACCATCGACGGGCTGA < 41bp 1 0.641431528405077 1 0.803619503974915 experiment 0.717136943189847 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MEG3 ENSG00000214548 ncRNA_exonic Human lincRNA chr14:101296099 chr14:101296097 . . 0 19 hm5C_associated_SNPs_10657 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101296080-101296100
64251 chr14 101419725 101419725 1 + C A rs79074703 101419734 + 101419714 101419754 41 TGAGTCATGGACGATGAATACTACGTGTCTGAAACTCTGAG TGAGTCATGGAAGATGAATACTACGTGTCTGAAACTCTGAG < 41bp 1 0.53772823927216 1 0.101414382457733 experiment 0.92454352145568 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419734 chr14:101419725 . . 0 12 hm5C_associated_SNPs_10660 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 101419725 101419725 1 + C A rs79074703 101419742 + 101419722 101419762 41 GGACGATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA GGAAGATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA < 41bp 1 0.532486928206988 1 0.102746695280075 experiment 0.935026143586024 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419742 chr14:101419725 . . 0 4 hm5C_associated_SNPs_10661 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 102466430 102466430 1 + G A rs34690489 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCACTGG < 41bp 1 0.194248407748293 1 0.67035299539566 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466430 synonymous SNV . 0 37 hm5C_associated_SNPs_10662 5 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466392-102466437
64251 chr14 102499701 102499701 1 + C T rs75075497 102499719 + 102499699 102499739 41 AACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCAT AATGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCAT < 41bp 1 0.202471719137145 1 0.811618089675903 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499719 chr14:102499701 synonymous SNV . 0 3 hm5C_associated_SNPs_10663 2 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 102499701 102499701 1 + C T rs75075497 102499720 + 102499700 102499740 41 ACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCATC ATGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCATC < 41bp 1 0.505235675006609 1 0.816608428955078 experiment 0.989528649986781 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499720 chr14:102499701 synonymous SNV . 0 2 hm5C_associated_SNPs_10664 2 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 102783435 102783435 1 + T C rs575379113 102783431 + 102783411 102783451 41 GGGGGCCCAACGTCAGGCGGCCGGTTAGCTCAGTTGGTTAG GGGGGCCCAACGTCAGGCGGCCGGCTAGCTCAGTTGGTTAG < 41bp 1 0.306018474236403 1 0.124983578920364 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF839 ENSG00000022976 upstream Human protein_coding chr14:102783431 chr14:102783435 . . 0 25 hm5C_associated_SNPs_10665 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:102783400-102783440
64251 chr14 102783435 102783435 1 + T C rs575379113 102783432 + 102783412 102783452 41 GGGGCCCAACGTCAGGCGGCCGGTTAGCTCAGTTGGTTAGA GGGGCCCAACGTCAGGCGGCCGGCTAGCTCAGTTGGTTAGA < 41bp 1 0.39351955260228 1 0.124693959951401 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF839 ENSG00000022976 upstream Human protein_coding chr14:102783432 chr14:102783435 . . 0 24 hm5C_associated_SNPs_10666 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:102783400-102783440
64251 chr14 102783435 102783435 1 + T C rs575379113 102783439 + 102783419 102783459 41 AACGTCAGGCGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGT AACGTCAGGCGGCCGGCTAGCTCAGTTGGTTAGAGCGTGGT < 41bp 1 0.689262458005005 1 0.455293983221054 experiment 0.62147508398999 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF839 ENSG00000022976 upstream Human protein_coding chr14:102783439 chr14:102783435 . . 0 17 hm5C_associated_SNPs_10667 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:102783400-102783440
64251 chr14 102783435 102783435 1 + T C rs575379113 102783454 + 102783434 102783474 41 GTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAG GCTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAG < 41bp 1 0.766201244499066 1 0.580879032611847 experiment 0.467597511001869 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ZNF839 ENSG00000022976 upstream Human protein_coding chr14:102783454 chr14:102783435 . . 0 2 hm5C_associated_SNPs_10668 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr14:102783400-102783440
64251 chr14 102786174 102786174 1 + G A rs570542134 102786156 + 102786136 102786176 41 AGCGAGGATGGCGGCGGCGGCGGCGGCCCGGCTCCTCCGGG AGCGAGGATGGCGGCGGCGGCGGCGGCCCGGCTCCTCCAGG < 41bp 1 0.798824309238672 1 0.888737916946411 experiment 0.402351381522657 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102786156 chr14:102786174 synonymous SNV . 0 39 hm5C_associated_SNPs_10669 0 0 3 GEMIN5 POSTAR2 ENCODE chr14:102786097-102786176
64251 chr14 102798023 102798023 1 + G A rs531362777 102798016 + 102797996 102798036 41 CTGAACCAGAAAATGGAGCTCTTTTGCGATCAGAGAGATAC CTGAACCAGAAAATGGAGCTCTTTTGCAATCAGAGAGATAC < 41bp 1 0.0452220039029904 1 0.0580668151378632 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102798016 chr14:102798023 nonsynonymous SNV 0.215 0 28 hm5C_associated_SNPs_10671 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:102797940-102798068
64251 chr14 102805187 102805187 1 + G A rs140733581 102805183 + 102805163 102805203 41 CATTAGGAATCACAGAATTCCTACGGAAGAAAGAAATACAC CATTAGGAATCACAGAATTCCTACAGAAGAAAGAAATACAC < 41bp 1 0.610905985541265 1 0.787894129753113 experiment 0.77818802891747 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102805183 chr14:102805187 nonsynonymous SNV 0.046 1 25 hm5C_associated_SNPs_10672 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102805175-102805210
64251 chr14 103194998 103194998 1 + A G rs8006699 103194999 + 103194979 103195019 41 TTTTTATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCT TTTTTATATAGCGTGGCAAGCTGACCAGCAGTGCCAGGCCT < 41bp 1 0.415054289866684 1 0.093802809715271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103194999 chr14:103194998 . . 0 20 hm5C_associated_SNPs_10673 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:103194974-103195001
64251 chr14 103195012 103195012 1 + C T rs537173816 103194999 + 103194979 103195019 41 TTTTTATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCT TTTTTATATAGCGTGGCAAACTGACCAGCAGTGTCAGGCCT < 41bp 1 0.384840800939868 1 0.0927510261535645 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103194999 chr14:103195012 . . 0 34 hm5C_associated_SNPs_10674 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103194983-103195071
64251 chr14 103397055 103397055 1 + G A rs1190233 103397047 + 103397027 103397067 41 TGACCGTCGACCTTGGGGCTCTCCACCCGCTCTGGCCCCAG TGACCGTCGACCTTGGGGCTCTCCACCCACTCTGGCCCCAG < 41bp 1 0.744831580906989 1 0.838768601417542 experiment 0.510336838186022 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AMN ENSG00000166126 UTR3 Human protein_coding chr14:103397047 chr14:103397055 . . 0 29 hm5C_associated_SNPs_10676 0 0 4 LARP4 POSTAR2 ENCODE chr14:103397030-103397110
64251 chr14 103602008 103602008 1 + G A rs115471053 103602018 + 103601998 103602038 41 GTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGA GTGCAGCCAGACTCAGGGATCCCCGGACACCTCTGTCCAGA < 41bp 1 0.437064957009644 1 0.145453065633774 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TNFAIP2 ENSG00000185215 UTR3 Human protein_coding chr14:103602018 chr14:103602008 . . 0 11 hm5C_associated_SNPs_10677 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr14:103602003-103602037
64251 chr14 103804276 103804276 1 + T C rs191428158 103804263 + 103804243 103804283 41 GCAAGAAAGTCTAACCTATTCCGGTGTTCTCTCTCCCATGA GCAAGAAAGTCTAACCTATTCCGGTGTTCTCTCCCCCATGA < 41bp 1 0.525758157513252 1 0.316789746284485 experiment 0.948483684973497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804263 chr14:103804276 . . 0 34 hm5C_associated_SNPs_10678 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804276 103804276 1 + T C rs191428158 103804264 + 103804244 103804284 41 CAAGAAAGTCTAACCTATTCCGGTGTTCTCTCTCCCATGAG CAAGAAAGTCTAACCTATTCCGGTGTTCTCTCCCCCATGAG < 41bp 1 0.371861766493273 1 0.703804314136505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804264 chr14:103804276 . . 0 33 hm5C_associated_SNPs_10679 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804276 103804276 1 + T C rs191428158 103804271 + 103804251 103804291 41 GTCTAACCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCC GTCTAACCTATTCCGGTGTTCTCTCCCCCATGAGACAAGCC < 41bp 1 0.0638054073216403 1 0.0951546430587769 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804271 chr14:103804276 . . 0 26 hm5C_associated_SNPs_10680 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804276 103804276 1 + T C rs191428158 103804277 + 103804257 103804297 41 CCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATA CCTATTCCGGTGTTCTCTCCCCCATGAGACAAGCCGTTATA < 41bp 1 0.179162752813158 1 0.229976505041122 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804277 chr14:103804276 . . 0 20 hm5C_associated_SNPs_10681 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804276 103804276 1 + T C rs191428158 103804278 + 103804258 103804298 41 CTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATAT CTATTCCGGTGTTCTCTCCCCCATGAGACAAGCCGTTATAT < 41bp 1 0.0922534396172968 1 0.317857027053833 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804278 chr14:103804276 . . 0 19 hm5C_associated_SNPs_10682 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804276 103804276 1 + T C rs191428158 103804279 + 103804259 103804299 41 TATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATATA TATTCCGGTGTTCTCTCCCCCATGAGACAAGCCGTTATATA < 41bp 1 0.382967096268552 1 0.458262503147125 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804279 chr14:103804276 . . 0 18 hm5C_associated_SNPs_10683 0 0 35 FBL POSTAR2 GSE43666,GSM1067865 chr14:103804180-103804280
64251 chr14 103804296 103804296 1 + T C rs552309514 103804277 + 103804257 103804297 41 CCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATA CCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTACA < 41bp 1 0.21546819430286 1 0.374909698963165 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804277 chr14:103804296 . . 0 40 hm5C_associated_SNPs_10684 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 103804296 103804296 1 + T C rs552309514 103804278 + 103804258 103804298 41 CTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATAT CTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTACAT < 41bp 1 0.101256579314868 1 0.207501620054245 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804278 chr14:103804296 . . 0 39 hm5C_associated_SNPs_10685 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 103804296 103804296 1 + T C rs552309514 103804279 + 103804259 103804299 41 TATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATATA TATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTACATA < 41bp 1 0.51675508300905 1 0.361443221569061 experiment 0.9664898339819 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804279 chr14:103804296 . . 0 38 hm5C_associated_SNPs_10686 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 104001837 104001837 1 + G A rs576227632 104001829 + 104001809 104001849 41 TCCCCCACCCAGCCAGAGCCCCTGACATGGGCTGCACTCGC TCCCCCACCCAGCCAGAGCCCCTGACATAGGCTGCACTCGC < 41bp 1 0.359028399399505 1 0.119098663330078 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104001829 chr14:104001837 . . 0 29 hm5C_associated_SNPs_10687 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:104001822-104001843
64251 chr14 104001847 104001847 1 + C T rs79958358 104001829 + 104001809 104001849 41 TCCCCCACCCAGCCAGAGCCCCTGACATGGGCTGCACTCGC TCCCCCACCCAGCCAGAGCCCCTGACATGGGCTGCACTTGC < 41bp 1 0.373376680922907 1 0.0858614146709442 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104001829 chr14:104001847 . . 0 39 hm5C_associated_SNPs_10688 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:104001834-104001870
64251 chr14 104002162 104002162 1 + G A rs118094429 104002156 + 104002136 104002176 41 GGACGCCCAGGCTGGGGGCTCTCCTCGCCCGCCCTGGTGTC GGACGCCCAGGCTGGGGGCTCTCCTCACCCGCCCTGGTGTC < 41bp 1 0.453087126318293 1 0.111204922199249 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104002156 chr14:104002162 . . 0 27 hm5C_associated_SNPs_10689 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr14:104002138-104002163
64251 chr14 104002165 104002165 1 + C T rs556420467 104002156 + 104002136 104002176 41 GGACGCCCAGGCTGGGGGCTCTCCTCGCCCGCCCTGGTGTC GGACGCCCAGGCTGGGGGCTCTCCTCGCCTGCCCTGGTGTC < 41bp 1 0.409827423341082 1 0.127527236938477 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104002156 chr14:104002165 . . 0 30 hm5C_associated_SNPs_10690 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:104002147-104002171
64251 chr14 104037965 104037965 1 + A C rs143925033 104037976 + 104037956 104037996 41 AAAGGTCTCAAGATTCTGCCCTCCAAGAAAGTCTTGCCATG AAAGGTCTCCAGATTCTGCCCTCCAAGAAAGTCTTGCCATG < 41bp 1 0.667770770910967 1 0.980594396591187 experiment 0.664458458178065 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74773;RNA-BisSeq;Huh7;Control APOPT1 ENSG00000256053;ENSG00000256500 CDS Human other chr14:104037976 chr14:104037965 synonymous SNV . 0 10 hm5C_associated_SNPs_10691 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:104037961-104037982
64251 chr14 104160023 104160023 1 + G A rs12586661 104160040 + 104160020 104160060 41 ACCGCCCTGCCCGGAGGCGCCAGCCGCACTCCTTGGCTTCC ACCACCCTGCCCGGAGGCGCCAGCCGCACTCCTTGGCTTCC < 41bp 1 0.431884757817142 1 0.727548956871033 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104160040 chr14:104160023 . . 0 4 hm5C_associated_SNPs_10692 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr14:104160022-104160023
64251 chr14 104167545 104167545 1 + G A rs709399 104167542 + 104167522 104167562 41 CTATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAG CTATCTTCTCTTGCAGTGACCCCAACCTGGCCCCGCTCCAG < 41bp 1 0.300308595261806 1 0.2059545814991 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167542 chr14:104167545 . . 0 24 hm5C_associated_SNPs_10693 0 0 4 SF3A3 POSTAR2 ENCODE chr14:104167493-104167549
64251 chr14 104167545 104167545 1 + G A rs709399 104167543 + 104167523 104167563 41 TATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGG TATCTTCTCTTGCAGTGACCCCAACCTGGCCCCGCTCCAGG < 41bp 1 0.0884408659690413 1 0.235670775175095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167543 chr14:104167545 . . 0 23 hm5C_associated_SNPs_10694 0 0 4 SF3A3 POSTAR2 ENCODE chr14:104167493-104167549
64251 chr14 104167545 104167545 1 + G A rs709399 104167544 + 104167524 104167564 41 ATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGGA ATCTTCTCTTGCAGTGACCCCAACCTGGCCCCGCTCCAGGA < 41bp 1 0.254997086732229 1 0.297566711902618 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167544 chr14:104167545 . . 0 22 hm5C_associated_SNPs_10695 0 0 4 SF3A3 POSTAR2 ENCODE chr14:104167493-104167549
64251 chr14 104167556 104167556 1 + G A rs375083845 104167542 + 104167522 104167562 41 CTATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAG CTATCTTCTCTTGCAGTGACCCCGACCTGGCCCCACTCCAG < 41bp 1 0.51096127370887 1 0.248290300369263 experiment 0.978077452582261 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167542 chr14:104167556 . . 0 35 hm5C_associated_SNPs_10696 0 0 1 SF3B4 POSTAR2 ENCODE chr14:104167491-104167570
64251 chr14 104167556 104167556 1 + G A rs375083845 104167543 + 104167523 104167563 41 TATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGG TATCTTCTCTTGCAGTGACCCCGACCTGGCCCCACTCCAGG < 41bp 1 0.139805714245844 1 0.292084336280823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167543 chr14:104167556 . . 0 34 hm5C_associated_SNPs_10697 0 0 1 SF3B4 POSTAR2 ENCODE chr14:104167491-104167570
64251 chr14 104167556 104167556 1 + G A rs375083845 104167544 + 104167524 104167564 41 ATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGGA ATCTTCTCTTGCAGTGACCCCGACCTGGCCCCACTCCAGGA < 41bp 1 0.301629729814694 1 0.415646642446518 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167544 chr14:104167556 . . 0 33 hm5C_associated_SNPs_10698 0 0 1 SF3B4 POSTAR2 ENCODE chr14:104167491-104167570
64251 chr14 104167564 104167564 1 + A G rs861536 104167544 + 104167524 104167564 41 ATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGGA ATCTTCTCTTGCAGTGACCCCGACCTGGCCCCGCTCCAGGG < 41bp 1 0.325301976895218 1 0.655885219573975 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLC1 ENSG00000126214 UTR3 Human protein_coding chr14:104167544 chr14:104167564 . . 0 41 hm5C_associated_SNPs_10699 0 0 1 SF3B4 POSTAR2 ENCODE chr14:104167491-104167570
64251 chr14 104642767 104642767 1 + G A rs147369482 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTCCCCCGGAAACCAAGGACTGCCTCTGCCACCACCCGTG < 41bp 1 0.191695716872777 1 0.0797576606273651 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642767 synonymous SNV . 0 16 hm5C_associated_SNPs_10706 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104642723-104642789
64251 chr14 104642791 104642791 1 + T C rs112809961 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGCG < 41bp 1 0.190877268884423 1 0.0637665987014771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642791 synonymous SNV . 0 40 hm5C_associated_SNPs_10707 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:104642774-104642799
64251 chr14 104643421 104643421 1 + T C rs2487302 104643408 + 104643388 104643428 41 CCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGAC CCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTCGCCGGAC < 41bp 1 0.713916711162777 1 0.818696141242981 experiment 0.572166577674446 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104643408 chr14:104643421 synonymous SNV . 0 34 hm5C_associated_SNPs_10711 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:104643417-104643460
64251 chr14 104643424 104643424 1 + C T rs113089140 104643408 + 104643388 104643428 41 CCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCCGGAC CCGGGCCAGCAAGGTAGAAGCAGCACACCGTCTTGCTGGAC < 41bp 1 0.658210574198573 1 0.80652379989624 experiment 0.683578851602853 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104643408 chr14:104643424 synonymous SNV . 0 37 hm5C_associated_SNPs_10712 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:104643417-104643460
64251 chr14 105179902 105179902 1 + G A rs148541427 105179914 + 105179894 105179934 41 CGGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCA CGGGGGCAACAAGGCAGCCTCCATGGATCCCCCAAGAGCCA < 41bp 1 0.107386901014493 1 0.210903018712997 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179914 chr14:105179902 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_10714 0 0 4 BUD13 POSTAR2 ENCODE chr14:105179772-105179906
64251 chr14 105179902 105179902 1 + G A rs148541427 105179915 + 105179895 105179935 41 GGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCAC GGGGGCAACAAGGCAGCCTCCATGGATCCCCCAAGAGCCAC < 41bp 1 0.575734793579006 1 0.467676520347595 experiment 0.848530412841988 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179915 chr14:105179902 nonsynonymous SNV 0.001 0 8 hm5C_associated_SNPs_10715 0 0 4 BUD13 POSTAR2 ENCODE chr14:105179772-105179906
64251 chr14 105180785 105180785 1 + C T rs34251364 105180778 + 105180758 105180798 41 ACCACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGC ACCACTGAGGATCCCCAGTGCCCCCAGTCCTTGGAGGGGGC < 41bp 1 0.062189557902778 1 0.107746750116348 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180778 chr14:105180785 nonsynonymous SNV 0.010 1 28 hm5C_associated_SNPs_10716 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105180785 105180785 1 + C T rs34251364 105180779 + 105180759 105180799 41 CCACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCC CCACTGAGGATCCCCAGTGCCCCCAGTCCTTGGAGGGGGCC < 41bp 1 0.290684299381168 1 0.239322006702423 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180779 chr14:105180785 nonsynonymous SNV 0.010 1 27 hm5C_associated_SNPs_10717 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105180785 105180785 1 + C T rs34251364 105180780 + 105180760 105180800 41 CACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCT CACTGAGGATCCCCAGTGCCCCCAGTCCTTGGAGGGGGCCT < 41bp 1 0.210981542288306 1 0.0486536026000977 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180780 chr14:105180785 nonsynonymous SNV 0.010 1 26 hm5C_associated_SNPs_10718 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105180785 105180785 1 + C T rs34251364 105180781 + 105180761 105180801 41 ACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCTG ACTGAGGATCCCCAGTGCCCCCAGTCCTTGGAGGGGGCCTG < 41bp 1 0.198449266155167 1 0.120468437671661 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180781 chr14:105180785 nonsynonymous SNV 0.010 1 25 hm5C_associated_SNPs_10719 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105180785 105180785 1 + C T rs34251364 105180782 + 105180762 105180802 41 CTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCTGG CTGAGGATCCCCAGTGCCCCCAGTCCTTGGAGGGGGCCTGG < 41bp 1 0.221408295395532 1 0.216400742530823 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180782 chr14:105180785 nonsynonymous SNV 0.010 1 24 hm5C_associated_SNPs_10720 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105180785 105180785 1 + C T rs34251364 105180798 + 105180778 105180818 41 CCCCCAGCCCTTGGAGGGGGCCTGGCCGGTGACTCTGGGAG CCCCCAGTCCTTGGAGGGGGCCTGGCCGGTGACTCTGGGAG < 41bp 1 0.114349481584226 1 0.293519258499146 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180798 chr14:105180785 nonsynonymous SNV 0.010 1 8 hm5C_associated_SNPs_10721 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105180757-105180790
64251 chr14 105209528 105209528 1 + C T rs139545166 105209523 + 105209503 105209543 41 GCTCACATGGTCAACGGATTCACTGCGTAAGCAACCCATGC GCTCACATGGTCAACGGATTCACTGTGTAAGCAACCCATGC < 41bp 1 0.601050921705992 1 0.18995413184166 experiment 0.797898156588016 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADSSL1 ENSG00000185100 CDS Human protein_coding chr14:105209523 chr14:105209528 nonsynonymous SNV 0.978 2 26 hm5C_associated_SNPs_10722 0 0 1 GRWD1 POSTAR2 ENCODE chr14:105209476-105209540
64251 chr14 105352970 105352970 1 + C T rs189275083 105352950 + 105352930 105352970 41 CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCTTC CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCTTT < 41bp 1 0.0425361888988176 1 0.0538603067398071 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105352950 chr14:105352970 synonymous SNV . 0 41 hm5C_associated_SNPs_10724 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:105352949-105352973
64251 chr14 105936288 105936288 1 + C T rs149260021 105936268 + 105936248 105936288 41 CCCTGCCCCCAGTCAAGCGGCGGCGGATGAACTGGATCGAC CCCTGCCCCCAGTCAAGCGGCGGCGGATGAACTGGATCGAT < 41bp 1 0.653674594032622 1 0.74238383769989 experiment 0.692650811934757 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936268 chr14:105936288 synonymous SNV . 0 41 hm5C_associated_SNPs_10727 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:105936276-105936298
64251 chr14 105936288 105936288 1 + C T rs149260021 105936285 + 105936265 105936305 41 CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT CGGCGGCGGATGAACTGGATCGATGCCCCGGATGACGTGTT < 41bp 1 0.332720873419203 1 0.385664224624634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936285 chr14:105936288 synonymous SNV . 0 24 hm5C_associated_SNPs_10728 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:105936276-105936298
64251 chr14 105936300 105936300 1 + C T rs147974087 105936285 + 105936265 105936305 41 CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT CGGCGGCGGATGAACTGGATCGACGCCCCGGATGATGTGTT < 41bp 1 0.489524495084624 1 0.48183286190033 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936285 chr14:105936300 synonymous SNV . 0 36 hm5C_associated_SNPs_10729 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr14 105936300 105936300 1 + C T rs147974087 105936315 + 105936295 105936335 41 GATGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGG GATGATGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGG < 41bp 1 0.57305496424729 1 0.565023005008698 experiment 0.853890071505419 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936315 chr14:105936300 synonymous SNV . 0 6 hm5C_associated_SNPs_10730 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr14 105936300 105936300 1 + C T rs147974087 105936317 + 105936297 105936337 41 TGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGGCC TGATGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGGCC < 41bp 1 0.659959565341124 1 0.708763301372528 experiment 0.680080869317752 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936317 chr14:105936300 synonymous SNV . 0 4 hm5C_associated_SNPs_10731 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr14 105958010 105958010 1 + G T rs587675709 105958028 + 105958008 105958048 41 CGGGCAACGCCTTGGCATCGCTCGCCCTGGGTAAGCCCCGC CGTGCAACGCCTTGGCATCGCTCGCCCTGGGTAAGCCCCGC < 41bp 1 0.659084072916005 1 0.0947177410125732 experiment 0.68183185416799 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958028 chr14:105958010 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_10734 0 0 1 PPIG POSTAR2 ENCODE chr14:105957985-105958039
64251 chr14 105958034 105958034 1 + C G rs373402464 105958028 + 105958008 105958048 41 CGGGCAACGCCTTGGCATCGCTCGCCCTGGGTAAGCCCCGC CGGGCAACGCCTTGGCATCGCTCGCCGTGGGTAAGCCCCGC < 41bp 1 0.659676457586206 1 0.0920794606208801 experiment 0.680647084827588 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958028 chr14:105958034 nonsynonymous SNV 0.536 0 27 hm5C_associated_SNPs_10735 0 0 3 PPIG POSTAR2 ENCODE chr14:105957985-105958039
64251 chr14 105964270 105964270 1 + C T rs144028188 105964280 + 105964260 105964300 41 GGAGGAGGAGCTGCGGGAGGCTGCGGAGCGCAGGCGGGCGG GGAGGAGGAGTTGCGGGAGGCTGCGGAGCGCAGGCGGGCGG < 41bp 1 0.775779634273438 1 0.745993316173553 experiment 0.448440731453124 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105964280 chr14:105964270 synonymous SNV . 0 11 hm5C_associated_SNPs_10736 0 0 1 PPIG POSTAR2 ENCODE chr14:105964247-105964320
64251 chr15 22863001 22863001 1 + A G rs17137283 22863000 + 22862980 22863020 41 TGATGTATGTGTGGATAGATCATCGGAATCTGTGACATGCC TGATGTATGTGTGGATAGATCGTCGGAATCTGTGACATGCC < 41bp 1 0.527700534210946 1 0.217714786529541 experiment 0.944598931578109 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBGCP5 ENSG00000153575 CDS Human other chr15:22863000 chr15:22863001 synonymous SNV . 0 22 hm5C_associated_SNPs_10737 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr15:22862977-22863002
64251 chr15 22940776 22940776 1 + G A rs139045862 22940756 + 22940736 22940776 41 GCACATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAG GCACATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAA < 41bp 1 0.356339304058767 1 0.282314956188202 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22940756 chr15:22940776 synonymous SNV . 0 41 hm5C_associated_SNPs_10738 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr15:22940764-22940789
64251 chr15 22958334 22958334 1 + G A rs138234345 22958333 + 22958313 22958353 41 CCTGGAGACCAAGGAGGCATCGATGATGGAGTGCGTGTCCT CCTGGAGACCAAGGAGGCATCAATGATGGAGTGCGTGTCCT < 41bp 1 0.484298596956549 1 0.206998497247696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22958333 chr15:22958334 synonymous SNV . 0 22 hm5C_associated_SNPs_10739 0 0 8 DDX24 POSTAR2 ENCODE chr15:22958269-22958340
64251 chr15 22962518 22962518 1 + C T rs141106211 22962534 + 22962514 22962554 41 GCTACGAGACGCTGCTGAAGCAGAGGCATGTGCAGGTGAGC GCTATGAGACGCTGCTGAAGCAGAGGCATGTGCAGGTGAGC < 41bp 1 0.687863133461471 1 0.830853223800659 experiment 0.624273733077058 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22962534 chr15:22962518 synonymous SNV . 0 5 hm5C_associated_SNPs_10740 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:22962501-22962521
64251 chr15 22969225 22969225 1 + G A rs562750082 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACACTGGACGGCTTCGACGCCATGTTCCG < 41bp 1 0.487098946226293 1 0.0854663252830505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969225 synonymous SNV . 0 15 hm5C_associated_SNPs_10741 0 0 1 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr15 22969232 22969232 1 + G A rs7170637 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGCTGGACAGCTTCGACGCCATGTTCCG < 41bp 1 0.438716473707425 1 0.126876264810562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969232 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_10742 0 1 2 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr15 22969233 22969233 1 + G A rs17137190 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGCTGGACGACTTCGACGCCATGTTCCG < 41bp 1 0.352950069152402 1 0.137651950120926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969233 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_10743 0 0 2 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr15 22993121 22993121 1 + C T rs149042952 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGGAGGTGGGGAACGTCATCCTCTTCTGCCTGCTCATCGA < 41bp 1 0.300351277833911 1 0.103889912366867 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993121 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_10744 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:22993117-22993138
64251 chr15 22993121 22993121 1 + C T rs149042952 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGGAGGTGGGGAACGTCATCCTCTTCTGCCTGCTCATCGAG < 41bp 1 0.432658948725336 1 0.38850873708725 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993121 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_10745 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:22993117-22993138
64251 chr15 22993140 22993140 1 + C T rs143004668 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTTATCGA < 41bp 1 0.213591436834816 1 0.0376859903335571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993140 synonymous SNV . 0 36 hm5C_associated_SNPs_10746 0 0 4 FMR1 POSTAR2 ENCODE chr15:22993082-22993142
64251 chr15 22993140 22993140 1 + C T rs143004668 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTTATCGAG < 41bp 1 0.400643403518053 1 0.264345943927765 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993140 synonymous SNV . 0 35 hm5C_associated_SNPs_10747 0 0 4 FMR1 POSTAR2 ENCODE chr15:22993082-22993142
64251 chr15 25213188 25213188 1 + C T rs556831171 25213171 + 25213151 25213191 41 GGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGCCATA GGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGCTATA < 41bp 1 0.779061547855264 1 0.450905919075012 experiment 0.441876904289471 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNHG14 ENSG00000128739;ENSG00000214265;ENSG00000273173 UTR5;UTR3 Human other chr15:25213171 chr15:25213188 . . 0 38 hm5C_associated_SNPs_10748 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:25213180-25213200
64251 chr15 29346573 29346573 1 + C G rs372649988 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGAGGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC < 41bp 1 0.765522029105235 1 0.882753610610962 experiment 0.468955941789531 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346573 nonsynonymous SNV 0.007 0 4 hm5C_associated_SNPs_10751 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr15 29346580 29346580 1 + C A rs569922946 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAAATGCCCATTCCGGAGGATGAGCCCTCCGTCC < 41bp 1 0.760816695688636 1 0.893976449966431 experiment 0.478366608622727 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346580 nonsynonymous SNV 0.170 1 11 hm5C_associated_SNPs_10752 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr15 29346606 29346606 1 + C A rs16955009 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCAGTCC < 41bp 1 0.725354310889856 1 0.865845441818237 experiment 0.549291378220288 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346606 synonymous SNV . 0 37 hm5C_associated_SNPs_10753 0 0 2 FXR2 POSTAR2 ENCODE chr15:29346570-29346611
64251 chr15 29346607 29346607 1 + G A rs554784948 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCATCC < 41bp 1 0.758301641516297 1 0.901528120040894 experiment 0.483396716967406 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346607 nonsynonymous SNV 0.214 0 38 hm5C_associated_SNPs_10754 0 0 2 FXR2 POSTAR2 ENCODE chr15:29346570-29346611
64251 chr15 29346705 29346705 1 + C A rs111870710 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACACCGGAGCCTCCCCCTACCG < 41bp 1 0.779840106888494 1 0.329155683517456 experiment 0.440319786223012 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346705 synonymous SNV . 0 27 hm5C_associated_SNPs_10755 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346705 29346705 1 + C A rs111870710 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCGGAGCCTCCCCCTACCGCCT < 41bp 1 0.675609768024173 1 0.751289367675781 experiment 0.648780463951653 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346705 synonymous SNV . 0 24 hm5C_associated_SNPs_10756 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29385285 29385285 1 + G A rs144741312 29385286 + 29385266 29385306 41 GCCCTCCTTCAGTTCCAGGGCCCTGCGAACCAGAAGACCTC GCCCTCCTTCAGTTCCAGGACCCTGCGAACCAGAAGACCTC < 41bp 1 0.080108097995025 1 0.187064170837402 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient APBA2 ENSG00000034053 CDS Human protein_coding chr15:29385286 chr15:29385285 synonymous SNV . 0 20 hm5C_associated_SNPs_10757 0 0 3 EFTUD2 POSTAR2 ENCODE chr15:29385273-29385338
64251 chr15 31221574 31221574 1 + C T rs117225217 31221554 + 31221534 31221574 41 TGAGCAGGAAGGCAGAGTGGCTTCCCTTGTCAGCTGGGATC TGAGCAGGAAGGCAGAGTGGCTTCCCTTGTCAGCTGGGATT < 41bp 1 0.165102830736792 1 0.0254212915897369 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31221554 chr15:31221574 nonsynonymous SNV 0.918 5 41 hm5C_associated_SNPs_10758 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:31221564-31221585
64251 chr15 31669326 31669326 1 + G A rs150587242 31669325 + 31669305 31669345 41 TGGAAACCAGGTGTGTGAGCCGAATGCCTGCCAGGCCATGC TGGAAACCAGGTGTGTGAGCCAAATGCCTGCCAGGCCATGC < 41bp 1 0.382130241312296 1 0.314343005418777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLF13 ENSG00000169926 UTR3 Human protein_coding chr15:31669325 chr15:31669326 . . 0 22 hm5C_associated_SNPs_10764 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:31669312-31669334
64251 chr15 36989578 36989578 1 + C A rs117638434 36989560 + 36989540 36989580 41 CATGAGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAACCT CATGAGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAAACT < 41bp 1 0.196386634002848 1 0.15148937702179 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989560 chr15:36989578 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_10766 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989578 36989578 1 + C A rs117638434 36989564 + 36989544 36989584 41 AGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAACCTGTCC AGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAAACTGTCC < 41bp 1 0.149778734193043 1 0.0426648557186127 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989564 chr15:36989578 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_10767 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989578 36989578 1 + C A rs117638434 36989579 + 36989559 36989599 41 ACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTAT ACTTGCTTCTAGAGAAAAAACTGTCCTTCCTAGGTAAGTAT < 41bp 1 0.243412230171038 1 0.0572905540466309 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989579 chr15:36989578 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_10768 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989578 36989578 1 + C A rs117638434 36989584 + 36989564 36989604 41 CTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTC CTTCTAGAGAAAAAACTGTCCTTCCTAGGTAAGTATTATTC < 41bp 1 0.111410716184075 1 0.0961554944515228 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989584 chr15:36989578 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_10769 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989578 36989578 1 + C A rs117638434 36989587 + 36989567 36989607 41 CTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACA CTAGAGAAAAAACTGTCCTTCCTAGGTAAGTATTATTCACA < 41bp 1 0.0826370778576088 1 0.186193138360977 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989587 chr15:36989578 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_10770 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989578 36989578 1 + C A rs117638434 36989588 + 36989568 36989608 41 TAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACAT TAGAGAAAAAACTGTCCTTCCTAGGTAAGTATTATTCACAT < 41bp 1 0.762847397841296 1 0.834668517112732 experiment 0.474305204317409 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989588 chr15:36989578 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_10771 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 38545196 38545196 1 + C T rs556907443 38545190 + 38545170 38545210 41 CACGGCGGAGGTTGCTGCCGCCACCCCCCTGCGGGGGTGGC CACGGCGGAGGTTGCTGCCGCCACCCTCCTGCGGGGGTGGC < 41bp 1 0.185003165508936 1 0.468428015708923 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPRED1 ENSG00000166068 UTR5 Human protein_coding chr15:38545190 chr15:38545196 . . 0 27 hm5C_associated_SNPs_10772 1 0 2 DDX3X POSTAR2 ENCODE chr15:38545104-38545236
64251 chr15 38545294 38545294 1 + C T rs192699510 38545300 + 38545280 38545320 41 CCCCCGCGCCCCCCCGGCCGCCGCTGCCTCCTGCCCCTCGG CCCCCGCGCCCCCCTGGCCGCCGCTGCCTCCTGCCCCTCGG < 41bp 1 0.702268543868134 1 0.0523906648159027 experiment 0.595462912263732 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPRED1 ENSG00000166068 UTR5 Human protein_coding chr15:38545300 chr15:38545294 . . 0 15 hm5C_associated_SNPs_10773 1 0 3 DDX3X POSTAR2 ENCODE chr15:38545268-38545317
64251 chr15 39887649 39887649 1 + C T rs1051442 39887667 + 39887647 39887687 41 AACCCCCAGGATCACTTCTCCTTGGCTTCCTTCTTTTCTGT AATCCCCAGGATCACTTCTCCTTGGCTTCCTTCTTTTCTGT < 41bp 1 0.34708853157949 1 0.216459929943085 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient THBS1 ENSG00000137801 UTR3 Human protein_coding chr15:39887667 chr15:39887649 . . 0 3 hm5C_associated_SNPs_10782 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr15:39887640-39887660
64251 chr15 39887848 39887848 1 + G A rs3743125 39887858 + 39887838 39887878 41 TGCTTCAGTTGGGAAGGTGCCCATTCCACTCTGCCTTTGTC TGCTTCAGTTAGGAAGGTGCCCATTCCACTCTGCCTTTGTC < 41bp 1 0.0310010169861208 1 0.106224536895752 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control THBS1 ENSG00000137801 UTR3 Human protein_coding chr15:39887858 chr15:39887848 . . 0 11 hm5C_associated_SNPs_10783 0 0 5 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:39887833-39887854
64251 chr15 39889225 39889225 1 + T G rs143881942 39889227 + 39889207 39889247 41 AACTCTGCAGAGAAGTATTCCCAATAAGGAAATAGCATTGA AACTCTGCAGAGAAGTATGCCCAATAAGGAAATAGCATTGA < 41bp 1 0.104173179019827 1 0.0704556703567505 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THBS1 ENSG00000137801 UTR3 Human protein_coding chr15:39889227 chr15:39889225 . . 0 19 hm5C_associated_SNPs_10784 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:39889200-39889233
64251 chr15 39889228 39889228 1 + C T rs184696047 39889227 + 39889207 39889247 41 AACTCTGCAGAGAAGTATTCCCAATAAGGAAATAGCATTGA AACTCTGCAGAGAAGTATTCCTAATAAGGAAATAGCATTGA < 41bp 1 0.221704549563259 1 0.067387580871582 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THBS1 ENSG00000137801 UTR3 Human protein_coding chr15:39889227 chr15:39889228 . . 0 22 hm5C_associated_SNPs_10785 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:39889200-39889233
64251 chr15 40453307 40453307 1 + A G rs2277559 40453308 + 40453288 40453328 41 GTTTGTTAGGGAGTCGTGTACGTGCCTTGGTCGCTTCTGTA GTTTGTTAGGGAGTCGTGTGCGTGCCTTGGTCGCTTCTGTA < 41bp 1 0.373752639803464 1 0.193102836608887 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BUB1B ENSG00000156970 UTR5 Human protein_coding chr15:40453308 chr15:40453307 . . 0 20 hm5C_associated_SNPs_10786 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:40453300-40453320
64251 chr15 40453327 40453327 1 + T C rs375434078 40453308 + 40453288 40453328 41 GTTTGTTAGGGAGTCGTGTACGTGCCTTGGTCGCTTCTGTA GTTTGTTAGGGAGTCGTGTACGTGCCTTGGTCGCTTCTGCA < 41bp 1 0.380068288649165 1 0.241090476512909 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BUB1B ENSG00000156970 UTR5 Human protein_coding chr15:40453308 chr15:40453327 . . 0 40 hm5C_associated_SNPs_10787 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:40453318-40453356
64251 chr15 40477831 40477831 1 + G A rs1801376 40477830 + 40477810 40477850 41 CATATGTGGAAGAGACTGCACGACAGCCAGTTATGTGAGTG CATATGTGGAAGAGACTGCACAACAGCCAGTTATGTGAGTG < 41bp 1 0.688096089231932 1 0.16503581404686 experiment 0.623807821536136 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40477830 chr15:40477831 nonsynonymous SNV 0.977 0 22 hm5C_associated_SNPs_10788 2 0 2 PRPF8 POSTAR2 ENCODE chr15:40477809-40477866
64251 chr15 40509803 40509803 1 + G A rs143232848 40509796 + 40509776 40509816 41 GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGT GTGCAGCTGGATGTTTTTACCCTCAGCAGCTTTCGGACTGT < 41bp 1 0.316488314543092 1 0.111525177955627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509796 chr15:40509803 nonsynonymous SNV 0.985 2 28 hm5C_associated_SNPs_10789 1 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr15 40509803 40509803 1 + G A rs143232848 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGGATGTTTTTACCCTCAGCAGCTTTCGGACTGTACAGAT < 41bp 1 0.3273606563556 1 0.389248043298721 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509802 chr15:40509803 nonsynonymous SNV 0.985 2 22 hm5C_associated_SNPs_10790 1 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr15 40513071 40513071 1 + A G rs8364 40513070 + 40513050 40513090 41 GACACATTTAGATGCACTACCATTGCTGTTCTACTTTTTGG GACACATTTAGATGCACTACCGTTGCTGTTCTACTTTTTGG < 41bp 1 0.159269814009818 1 0.0564484596252441 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BUB1B ENSG00000156970 UTR3 Human protein_coding chr15:40513070 chr15:40513071 . . 0 22 hm5C_associated_SNPs_10791 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:40512978-40513108
64251 chr15 40708545 40708545 1 + C T rs372504234 40708548 + 40708528 40708568 41 ACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTGAGTG ACACAGGTAGCCCTGGATGGCATTCAGTGTTTTGGTGAGTG < 41bp 1 0.0658834337050676 1 0.0254197418689728 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IVD ENSG00000128928 CDS Human protein_coding chr15:40708548 chr15:40708545 synonymous SNV . 0 18 hm5C_associated_SNPs_10794 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr15:40708533-40708554
64251 chr15 40711058 40711058 1 + G A rs115034694 40711053 + 40711033 40711073 41 AATAATAAACCTAGCCTAGCCAGGCGTGGTGGCTCATGCTT AATAATAAACCTAGCCTAGCCAGGCATGGTGGCTCATGCTT < 41bp 1 0.538931472410088 1 0.369767010211945 experiment 0.922137055179825 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IVD ENSG00000128928 UTR3 Human protein_coding chr15:40711053 chr15:40711058 . . 0 26 hm5C_associated_SNPs_10795 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:40711032-40711091
64251 chr15 40759486 40759486 1 + T C rs188691405 40759467 + 40759447 40759487 41 CCAGAGTAGACTAACAGGCTCAGTCCCCTGTTGTCCTTGTG CCAGAGTAGACTAACAGGCTCAGTCCCCTGTTGTCCTTGCG < 41bp 1 0.15944725127842 1 0.213841080665588 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BAHD1 ENSG00000140320 UTR3 Human protein_coding chr15:40759467 chr15:40759486 . . 0 40 hm5C_associated_SNPs_10796 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40759448-40759490
64251 chr15 40862064 40862064 1 + C G rs1058734 40862046 + 40862026 40862066 41 CACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCCTA CACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCGTA < 41bp 1 0.310158887397149 1 0.464965254068375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40862046 chr15:40862064 synonymous SNV . 0 39 hm5C_associated_SNPs_10797 0 0 1 DDX6 POSTAR2 ENCODE chr15:40861969-40862065
64251 chr15 40862064 40862064 1 + C G rs1058734 40862047 + 40862027 40862067 41 ACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCCTAC ACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCGTAC < 41bp 1 0.503111859827424 1 0.853866755962372 experiment 0.993776280345152 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40862047 chr15:40862064 synonymous SNV . 0 38 hm5C_associated_SNPs_10798 0 0 1 DDX6 POSTAR2 ENCODE chr15:40861969-40862065
64251 chr15 40898643 40898643 1 + G C rs7177192 40898648 + 40898628 40898668 41 GAGGTGGGAATGAAAGAGTTCAGGTAAGTCTTTTGTGCAAA GAGGTGGGAATGAAACAGTTCAGGTAAGTCTTTTGTGCAAA < 41bp 1 0.541190442095034 1 0.35553839802742 experiment 0.917619115809933 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KNL1 ENSG00000137812 CDS Human protein_coding chr15:40898648 chr15:40898643 nonsynonymous SNV 0.891 0 16 hm5C_associated_SNPs_10800 2 0 1 PRPF8 POSTAR2 ENCODE chr15:40898593-40898678
64251 chr15 41059598 41059598 1 + G T rs149691221 41059591 + 41059571 41059611 41 GGGGCACCCCTGTGGAGGGGCTGCTGTGGGCCCTGACCTCC GGGGCACCCCTGTGGAGGGGCTGCTGTTGGCCCTGACCTCC < 41bp 1 0.523313384906375 1 0.215825349092484 experiment 0.95337323018725 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GCHFR ENSG00000137880 UTR3 Human protein_coding chr15:41059591 chr15:41059598 . . 0 28 hm5C_associated_SNPs_10801 0 0 3 DDX55 POSTAR2 ENCODE chr15:41059561-41059732
64251 chr15 41059785 41059785 1 + G A rs73398513 41059784 + 41059764 41059804 41 CTCCTGCTTCGGGCCTGGGCCGAGGGCCTTGTGTAGGCCAT CTCCTGCTTCGGGCCTGGGCCAAGGGCCTTGTGTAGGCCAT < 41bp 1 0.76853362905017 1 0.833237886428833 experiment 0.46293274189966 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GCHFR ENSG00000137880 UTR3 Human protein_coding chr15:41059784 chr15:41059785 . . 0 22 hm5C_associated_SNPs_10802 0 0 7 DDX55 POSTAR2 ENCODE chr15:41059726-41059813
64251 chr15 41099662 41099662 1 + T G rs193102973 41099671 + 41099651 41099691 41 GGCCTGACGGATTCGTACTACAACTCCCAAGAGTCTAAGCG GGCCTGACGGAGTCGTACTACAACTCCCAAGAGTCTAAGCG < 41bp 1 0.310570581155181 1 0.31285434961319 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC17;ZFYVE19 ENSG00000104129;ENSG00000166140 UTR5 Human other chr15:41099671 chr15:41099662 . . 0 12 hm5C_associated_SNPs_10803 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:41099646-41099688
64251 chr15 41192540 41192540 1 + C T rs79536497 41192553 + 41192533 41192573 41 TGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGAGAAACC TGCAGGGTGACCCAGAGGCCCTGACTCTCTACCGAGAAACC < 41bp 1 0.125908197445268 1 0.054103821516037 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192553 chr15:41192540 synonymous SNV . 0 8 hm5C_associated_SNPs_10804 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:41192518-41192541
64251 chr15 41192558 41192558 1 + T C rs595559 41192553 + 41192533 41192573 41 TGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGAGAAACC TGCAGGGCGACCCAGAGGCCCTGACCCTCTACCGAGAAACC < 41bp 1 0.0873600952040182 1 0.0716854631900787 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192553 chr15:41192558 synonymous SNV . 0 26 hm5C_associated_SNPs_10805 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:41192557-41192558
64251 chr15 41245684 41245684 1 + G A rs549813567 41245677 + 41245657 41245697 41 TGGGGGGCGCTCAGCTGGAGCTACCGAGCGGTGCCAGGCCA TGGGGGGCGCTCAGCTGGAGCTACCGAACGGTGCCAGGCCA < 41bp 1 0.385332732392925 1 0.129731446504593 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41245677 chr15:41245684 nonsynonymous SNV 0.629 0 28 hm5C_associated_SNPs_10807 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:41245680-41245720
64251 chr15 41245692 41245692 1 + A G rs201335601 41245677 + 41245657 41245697 41 TGGGGGGCGCTCAGCTGGAGCTACCGAGCGGTGCCAGGCCA TGGGGGGCGCTCAGCTGGAGCTACCGAGCGGTGCCGGGCCA < 41bp 1 0.429099553576263 1 0.173999488353729 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41245677 chr15:41245692 nonsynonymous SNV 0.998 1 36 hm5C_associated_SNPs_10808 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:41245680-41245720
64251 chr15 41554991 41554991 1 + T C rs145600828 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTGGATTCATGCGAACTCTGGCTCATTTCCGC < 41bp 1 0.220174249956939 1 0.215774059295654 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41554991 synonymous SNV . 0 27 hm5C_associated_SNPs_10809 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:41554981-41554998
64251 chr15 41571613 41571613 1 + C T rs147120669 41571595 + 41571575 41571615 41 ATTTCTTCACTAAAGGAGACCAAACTGTTCCTTGCGGTCTA ATTTCTTCACTAAAGGAGACCAAACTGTTCCTTGCGGTTTA < 41bp 1 0.194700138760234 1 0.106640517711639 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CHP1 ENSG00000187446 UTR3 Human protein_coding chr15:41571595 chr15:41571613 . . 0 39 hm5C_associated_SNPs_10811 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163975 chr15:41571612-41571613
64251 chr15 41576228 41576228 1 + A G rs548200821 41576209 + 41576189 41576229 41 GGGTTGGCCACCTTGAGAAGCTGCGAAGATGGCGGAGTAAG GGGTTGGCCACCTTGAGAAGCTGCGAAGATGGCGGAGTAGG < 41bp 1 0.736711683364803 1 0.411794185638428 experiment 0.526576633270395 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41576209 chr15:41576228 . . 0 40 hm5C_associated_SNPs_10812 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41576227-41576254
64251 chr15 41591463 41591463 1 + G A rs141502590 41591474 + 41591454 41591494 41 ATTACAGGCGCGCACCACCACGCTCAGCCTGATTTCTAGGC ATTACAGGCACGCACCACCACGCTCAGCCTGATTTCTAGGC < 41bp 1 0.371755032795297 1 0.0317431092262268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41591474 chr15:41591463 . . 0 10 hm5C_associated_SNPs_10813 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41591448-41591484
64251 chr15 41591463 41591463 1 + G A rs141502590 41591476 + 41591456 41591496 41 TACAGGCGCGCACCACCACGCTCAGCCTGATTTCTAGGCTG TACAGGCACGCACCACCACGCTCAGCCTGATTTCTAGGCTG < 41bp 1 0.669536949178361 1 0.0934792459011078 experiment 0.660926101643279 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41591476 chr15:41591463 . . 0 8 hm5C_associated_SNPs_10814 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41591448-41591484
64251 chr15 41591475 41591475 1 + G A rs80024738 41591474 + 41591454 41591494 41 ATTACAGGCGCGCACCACCACGCTCAGCCTGATTTCTAGGC ATTACAGGCGCGCACCACCACACTCAGCCTGATTTCTAGGC < 41bp 1 0.360705395045847 1 0.0324864387512207 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41591474 chr15:41591475 . . 0 22 hm5C_associated_SNPs_10815 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41591448-41591484
64251 chr15 41591475 41591475 1 + G A rs80024738 41591476 + 41591456 41591496 41 TACAGGCGCGCACCACCACGCTCAGCCTGATTTCTAGGCTG TACAGGCGCGCACCACCACACTCAGCCTGATTTCTAGGCTG < 41bp 1 0.705465166529277 1 0.128179132938385 experiment 0.589069666941445 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41591476 chr15:41591475 . . 0 20 hm5C_associated_SNPs_10816 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41591448-41591484
64251 chr15 41672384 41672384 1 + A G rs7168431 41672364 + 41672344 41672384 41 TTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATTAA TTTTGGGAATGCGAAGGGGCCTCATTTTGGCTGAAGATTAG < 41bp 1 0.314000967131221 1 0.0690795481204987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41672364 chr15:41672384 synonymous SNV . 0 41 hm5C_associated_SNPs_10817 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714641 chr15:41672337-41672474
64251 chr15 41786350 41786350 1 + G A rs548638308 41786343 + 41786323 41786363 41 CCCCAACGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCC CCCCAACGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCC < 41bp 1 0.283003817375799 1 0.0967272818088531 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786343 chr15:41786350 synonymous SNV . 0 28 hm5C_associated_SNPs_10818 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 41786350 41786350 1 + G A rs548638308 41786345 + 41786325 41786365 41 CCAACGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCCCT CCAACGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCCCT < 41bp 1 0.288438680811593 1 0.104119628667831 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786345 chr15:41786350 synonymous SNV . 0 26 hm5C_associated_SNPs_10819 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 41786350 41786350 1 + G A rs548638308 41786346 + 41786326 41786366 41 CAACGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCCCTC CAACGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCCCTC < 41bp 1 0.565365037659503 1 0.479962229728699 experiment 0.869269924680993 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786346 chr15:41786350 synonymous SNV . 0 25 hm5C_associated_SNPs_10820 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 41786350 41786350 1 + G A rs548638308 41786347 + 41786327 41786367 41 AACGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCCCTCA AACGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCCCTCA < 41bp 1 0.524654111787479 1 0.741327583789825 experiment 0.950691776425041 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786347 chr15:41786350 synonymous SNV . 0 24 hm5C_associated_SNPs_10821 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 41786350 41786350 1 + G A rs548638308 41786348 + 41786328 41786368 41 ACGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCCCTCAG ACGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCCCTCAG < 41bp 1 0.393730741356711 1 0.614978969097137 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786348 chr15:41786350 synonymous SNV . 0 23 hm5C_associated_SNPs_10822 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 41786350 41786350 1 + G A rs548638308 41786349 + 41786329 41786369 41 CGGGCTTCCGCGGGCTCCCCCGGCCCCGGTGATCCCTCAGC CGGGCTTCCGCGGGCTCCCCCAGCCCCGGTGATCCCTCAGC < 41bp 1 0.39647064404025 1 0.598620653152466 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ITPKA ENSG00000137825 CDS Human protein_coding chr15:41786349 chr15:41786350 synonymous SNV . 0 22 hm5C_associated_SNPs_10823 0 0 2 DHX30 POSTAR2 ENCODE chr15:41786311-41786381
64251 chr15 42059342 42059342 1 + T C rs71472501 42059348 + 42059328 42059368 41 TATAGCTGCCAAAGTTGGGTCAGTTGGACACAAAATGAACT TATAGCTGCCAAAGCTGGGTCAGTTGGACACAAAATGAACT < 41bp 1 0.0523404012345572 1 0.124253034591675 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059348 chr15:42059342 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_10825 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:42059284-42059379
64251 chr15 42841045 42841045 1 + G A rs200759756 42841025 + 42841005 42841045 41 CGCGCCGTGCGTTCGCCCTGCGATCCCGCTCACTCTTGGCG CGCGCCGTGCGTTCGCCCTGCGATCCCGCTCACTCTTGGCA < 41bp 1 0.15786160624113 1 0.19023934006691 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient HAUS2 ENSG00000137814 UTR5 Human protein_coding chr15:42841025 chr15:42841045 . . 0 41 hm5C_associated_SNPs_10829 0 0 3 DDX3X POSTAR2 ENCODE chr15:42841039-42841131
64251 chr15 42841045 42841045 1 + G A rs200759756 42841030 + 42841010 42841050 41 CGTGCGTTCGCCCTGCGATCCCGCTCACTCTTGGCGCCTTC CGTGCGTTCGCCCTGCGATCCCGCTCACTCTTGGCACCTTC < 41bp 1 0.424057561822025 1 0.155815213918686 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient HAUS2 ENSG00000137814 UTR5 Human protein_coding chr15:42841030 chr15:42841045 . . 0 36 hm5C_associated_SNPs_10830 0 0 3 DDX3X POSTAR2 ENCODE chr15:42841039-42841131
64251 chr15 42974474 42974474 1 + G A rs570324067 42974490 + 42974470 42974510 41 TGGTGCACCTGCAGCTCCTGCGGAGACACACTCTTCGGGCA TGGTACACCTGCAGCTCCTGCGGAGACACACTCTTCGGGCA < 41bp 1 0.322078704589256 1 0.795155763626099 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STARD9 ENSG00000159433 CDS Human protein_coding chr15:42974490 chr15:42974474 synonymous SNV . 0 5 hm5C_associated_SNPs_10831 0 0 1 EIF3H POSTAR2 ENCODE chr15:42974449-42974513
64251 chr15 43632490 43632490 1 + G T rs372787096 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC AGATGTCATAAAAGAATTTTCAGATGACGGCGTCAAGTACC < 41bp 1 0.557494129261281 1 0.566618800163269 experiment 0.885011741477439 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632490 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_10832 0 0 2 DDX24 POSTAR2 ENCODE chr15:43632468-43632527
64251 chr15 43632498 43632498 1 + C T rs201947910 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC AGATGTCATAAAAGAATTTGCAGATGATGGCGTCAAGTACC < 41bp 1 0.451763302050245 1 0.494767069816589 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632498 synonymous SNV . 0 28 hm5C_associated_SNPs_10833 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr15:43632496-43632538
64251 chr15 44159077 44159077 1 + C T rs145208595 44159067 + 44159047 44159087 41 AGCTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAA AGCTCCTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAA < 41bp 1 0.526324272204382 1 0.141729533672333 experiment 0.947351455591236 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159067 chr15:44159077 . . 0 31 hm5C_associated_SNPs_10836 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159070 + 44159050 44159090 41 TCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGT TCCTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGT < 41bp 1 0.41024336580798 1 0.0431365072727203 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159070 chr15:44159077 . . 0 28 hm5C_associated_SNPs_10837 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159071 + 44159051 44159091 41 CCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTG CCTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGTG < 41bp 1 0.528550236104225 1 0.149966925382614 experiment 0.94289952779155 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159071 chr15:44159077 . . 0 27 hm5C_associated_SNPs_10838 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159072 + 44159052 44159092 41 CTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGC CTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGTGC < 41bp 1 0.525620361563458 1 0.156104505062103 experiment 0.948759276873083 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159072 chr15:44159077 . . 0 26 hm5C_associated_SNPs_10839 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159074 + 44159054 44159094 41 GACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTG GACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGTGCTG < 41bp 1 0.217949746790965 1 0.0799094140529633 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159074 chr15:44159077 . . 0 24 hm5C_associated_SNPs_10840 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159075 + 44159055 44159095 41 ACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGG ACCTCAGGTGATCTGCCCGCCTTGGCCTCCAAAAGTGCTGG < 41bp 1 0.635141709708372 1 0.13001024723053 experiment 0.729716580583256 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159075 chr15:44159077 . . 0 23 hm5C_associated_SNPs_10841 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44159077 44159077 1 + C T rs145208595 44159080 + 44159060 44159100 41 AGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAATTA AGGTGATCTGCCCGCCTTGGCCTCCAAAAGTGCTGGAATTA < 41bp 1 0.157437437870688 1 0.257721990346909 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159080 chr15:44159077 . . 0 18 hm5C_associated_SNPs_10842 0 0 1 PUM2 POSTAR2 ENCODE chr15:44159075-44159121
64251 chr15 44581094 44581094 1 + A C rs530306718 44581074 + 44581054 44581094 41 GGACCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCA GGACCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCC < 41bp 1 0.489764360944094 1 0.280296623706818 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581074 chr15:44581094 . . 0 41 hm5C_associated_SNPs_10843 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44581094 44581094 1 + A C rs530306718 44581076 + 44581056 44581096 41 ACCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGC ACCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCCGC < 41bp 1 0.487599124224511 1 0.0347970426082611 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581076 chr15:44581094 . . 0 39 hm5C_associated_SNPs_10844 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44581094 44581094 1 + A C rs530306718 44581077 + 44581057 44581097 41 CCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGCC CCTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCCGCC < 41bp 1 0.461867001073369 1 0.0672179758548737 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581077 chr15:44581094 . . 0 38 hm5C_associated_SNPs_10845 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44581094 44581094 1 + A C rs530306718 44581078 + 44581058 44581098 41 CTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGCCG CTGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCCGCCG < 41bp 1 0.389317578859454 1 0.0521951019763947 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581078 chr15:44581094 . . 0 37 hm5C_associated_SNPs_10846 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44581094 44581094 1 + A C rs530306718 44581079 + 44581059 44581099 41 TGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGCCGA TGCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCCGCCGA < 41bp 1 0.248708217711046 1 0.0600190162658691 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581079 chr15:44581094 . . 0 36 hm5C_associated_SNPs_10847 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44581094 44581094 1 + A C rs530306718 44581080 + 44581060 44581100 41 GCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCAGCCGAC GCGGCTTGCGGCCCCGCCCCCTTCTCCGGCTCGCCGCCGAC < 41bp 1 0.467281985268063 1 0.235817611217499 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581080 chr15:44581094 . . 0 35 hm5C_associated_SNPs_10848 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:44581060-44581100
64251 chr15 44673140 44673140 1 + G T rs140734894 44673143 + 44673123 44673163 41 CTAAAGCAGGCTACCAAGGACAGAGTCAGTGATTTCCATAA CTAAAGCAGGCTACCAATGACAGAGTCAGTGATTTCCATAA < 41bp 1 0.626766615860074 1 0.394106030464172 experiment 0.746466768279853 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CASC4 ENSG00000166734 CDS Human protein_coding chr15:44673143 chr15:44673140 nonsynonymous SNV 0.992 3 18 hm5C_associated_SNPs_10849 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:44673135-44673161
64251 chr15 44817537 44817537 1 + A T rs75554011 44817553 + 44817533 44817573 41 TGCTATATGAAAATAGTCTTCAAGCCTTGGTTCTCTAATGC TGCTTTATGAAAATAGTCTTCAAGCCTTGGTTCTCTAATGC < 41bp 1 0.274885188623066 1 0.115152597427368 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CTDSPL2 ENSG00000137770 UTR3 Human protein_coding chr15:44817553 chr15:44817537 . . 0 5 hm5C_associated_SNPs_10850 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:44817536-44817568
64251 chr15 45009903 45009903 1 + G A rs576157768 45009886 + 45009866 45009906 41 TTGATATGCTTATACACTTACACTTTATGCACAAAATGTAG TTGATATGCTTATACACTTACACTTTATGCACAAAATATAG < 41bp 1 0.0762510505124751 1 0.0853982269763947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control B2M ENSG00000166710 splicing Human protein_coding chr15:45009886 chr15:45009903 . . 0 38 hm5C_associated_SNPs_10851 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr15:45009900-45009920
64251 chr15 45695445 45695445 1 + C G rs143453038 45695429 + 45695409 45695449 41 AGCTGCTGGCAGTCAGCGCCCCGGCGCTGCAGGGTTCCCGG AGCTGCTGGCAGTCAGCGCCCCGGCGCTGCAGGGTTGCCGG < 41bp 1 0.708448989677447 1 0.604663968086243 experiment 0.583102020645106 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45695429 chr15:45695445 nonsynonymous SNV 0.095 3 37 hm5C_associated_SNPs_10855 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:45695438-45695469
64251 chr15 45695448 45695448 1 + G T rs147996419 45695429 + 45695409 45695449 41 AGCTGCTGGCAGTCAGCGCCCCGGCGCTGCAGGGTTCCCGG AGCTGCTGGCAGTCAGCGCCCCGGCGCTGCAGGGTTCCCTG < 41bp 1 0.717827742366034 1 0.538946151733398 experiment 0.564344515267932 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45695429 chr15:45695448 nonsynonymous SNV 0.440 2 40 hm5C_associated_SNPs_10856 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:45695438-45695469
64251 chr15 49448083 49448083 1 + C T rs60899981 49448103 + 49448083 49448123 41 CCTGGGTAAAGGAGCAGTCTCCTCCCTTGCTTGGGACTCTG TCTGGGTAAAGGAGCAGTCTCCTCCCTTGCTTGGGACTCTG < 41bp 1 0.093365061994849 1 0.122019410133362 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALK2 ENSG00000156958 UTR5 Human protein_coding chr15:49448103 chr15:49448083 . . 0 1 hm5C_associated_SNPs_10857 0 0 1 ZNF622 POSTAR2 ENCODE chr15:49448040-49448131
64251 chr15 50474486 50474486 1 + T A rs550411679 50474472 + 50474452 50474492 41 CGGTACCTGCAGCGGAGGAGCTCTGTCTTCCCCTTCATCTC CGGTACCTGCAGCGGAGGAGCTCTGTCTTCCCCTACATCTC < 41bp 1 0.433732383280139 1 0.16103321313858 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC27A2 ENSG00000104043;ENSG00000140284 UTR5 Human other chr15:50474472 chr15:50474486 . . 0 35 hm5C_associated_SNPs_10858 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585670 chr15:50474478-50474504
64251 chr15 50782576 50782576 1 + T A rs200463480 50782564 + 50782544 50782584 41 TCATCTGCACCTCCTTCCACCCCTCCAACTCATAAAGCCAA TCATCTGCACCTCCTTCCACCCCTCCAACTCAAAAAGCCAA < 41bp 1 0.0364926471303561 1 0.237153500318527 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50782564 chr15:50782576 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_10859 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:50782574-50782612
64251 chr15 57545643 57545643 1 + G A rs143889768 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC CAATTCAAACTATGGAGGATCAAGCCTTGTTACAAGCAGTC < 41bp 1 0.210066284343043 1 0.257663667201996 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545643 nonsynonymous SNV 0.997 0 32 hm5C_associated_SNPs_10863 0 0 1 PRPF8 POSTAR2 ENCODE chr15:57545614-57545769
64251 chr15 57554344 57554344 1 + T G rs36060670 57554338 + 57554318 57554358 41 CAGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCA CAGTCTCAATGGCAATCATTCAGTCCGGTCTAGTACAGTCA < 41bp 1 0.136617007405897 1 0.121703535318375 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554338 chr15:57554344 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_10864 1 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554344 57554344 1 + T G rs36060670 57554343 + 57554323 57554363 41 TCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCACTACT TCAATGGCAATCATTCAGTCCGGTCTAGTACAGTCACTACT < 41bp 1 0.117407966315703 1 0.0515216588973999 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554343 chr15:57554344 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_10865 1 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554344 57554344 1 + T G rs36060670 57554353 + 57554333 57554373 41 TCATTCAGTCCTGTCTAGTACAGTCACTACTTCAAGCACAG TCATTCAGTCCGGTCTAGTACAGTCACTACTTCAAGCACAG < 41bp 1 0.192633944132576 1 0.0906772315502167 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554353 chr15:57554344 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_10866 1 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554344 57554344 1 + T G rs36060670 57554357 + 57554337 57554377 41 TCAGTCCTGTCTAGTACAGTCACTACTTCAAGCACAGACCT TCAGTCCGGTCTAGTACAGTCACTACTTCAAGCACAGACCT < 41bp 1 0.497205648844434 1 0.133619964122772 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554357 chr15:57554344 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_10867 1 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554344 57554344 1 + T G rs36060670 57554359 + 57554339 57554379 41 AGTCCTGTCTAGTACAGTCACTACTTCAAGCACAGACCTGA AGTCCGGTCTAGTACAGTCACTACTTCAAGCACAGACCTGA < 41bp 1 0.356112003809777 1 0.0685617923736572 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554359 chr15:57554344 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_10868 1 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57579223 57579223 1 + A C rs1045665 57579221 + 57579201 57579241 41 TGCTTTATTTCTAATAATAACCAAGACTTTTCAAGCTTCTA TGCTTTATTTCTAATAATAACCCAGACTTTTCAAGCTTCTA < 41bp 1 0.139749378381659 1 0.120644479990005 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCF12 ENSG00000140262 UTR3 Human protein_coding chr15:57579221 chr15:57579223 . . 0 23 hm5C_associated_SNPs_10869 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr15:57579200-57579229
64251 chr15 57579223 57579223 1 + A C rs1045665 57579222 + 57579202 57579242 41 GCTTTATTTCTAATAATAACCAAGACTTTTCAAGCTTCTAG GCTTTATTTCTAATAATAACCCAGACTTTTCAAGCTTCTAG < 41bp 1 0.370107338810031 1 0.0929438769817352 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCF12 ENSG00000140262 UTR3 Human protein_coding chr15:57579222 chr15:57579223 . . 0 22 hm5C_associated_SNPs_10870 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr15:57579200-57579229
64251 chr15 57999163 57999163 1 + G C rs376028082 57999146 + 57999126 57999166 41 AGCGCCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGGTC AGCGCCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGCGTC < 41bp 1 0.783725066387401 1 0.854749798774719 experiment 0.432549867225198 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:57999146 chr15:57999163 . . 0 38 hm5C_associated_SNPs_10871 0 0 3 BUD13 POSTAR2 ENCODE chr15:57999145-57999199
64251 chr15 57999164 57999164 1 + G A rs140115125 57999146 + 57999126 57999166 41 AGCGCCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGGTC AGCGCCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGATC < 41bp 1 0.755341893256046 1 0.876704335212708 experiment 0.489316213487909 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:57999146 chr15:57999164 . . 0 39 hm5C_associated_SNPs_10872 0 0 3 BUD13 POSTAR2 ENCODE chr15:57999145-57999199
64251 chr15 59280153 59280153 1 + G A rs139175210 59280164 + 59280144 59280184 41 CCGACGTCTGAGGCGCAGATCGCTGGCTCTCGACGCATTAC CCGACGTCTAAGGCGCAGATCGCTGGCTCTCGACGCATTAC < 41bp 1 0.399651546704926 1 0.100083619356155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF111 ENSG00000157450 UTR5 Human protein_coding chr15:59280164 chr15:59280153 . . 0 10 hm5C_associated_SNPs_10873 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:59280096-59280179
64251 chr15 59280162 59280162 1 + A G rs539701947 59280164 + 59280144 59280184 41 CCGACGTCTGAGGCGCAGATCGCTGGCTCTCGACGCATTAC CCGACGTCTGAGGCGCAGGTCGCTGGCTCTCGACGCATTAC < 41bp 1 0.37426916070528 1 0.145398914813995 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF111 ENSG00000157450 UTR5 Human protein_coding chr15:59280164 chr15:59280162 . . 0 19 hm5C_associated_SNPs_10874 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:59280096-59280179
64251 chr15 59348009 59348009 1 + C T rs184483062 59348026 + 59348006 59348046 41 ATGCAGCAGAAGTTGTGGACCTTACCGTTGATGAAGATGGT ATGTAGCAGAAGTTGTGGACCTTACCGTTGATGAAGATGGT < 41bp 1 0.0349640701992227 1 0.106530636548996 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF111 ENSG00000157450 CDS Human protein_coding chr15:59348026 chr15:59348009 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_10875 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr15:59347992-59348013
64251 chr15 63358174 63358174 1 + A G rs140658011 63358189 + 63358169 63358209 41 TGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATC TGTCTGTTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATC < 41bp 1 0.543295454892044 1 0.0909456610679626 experiment 0.913409090215911 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63358189 chr15:63358174 synonymous SNV . 0 6 hm5C_associated_SNPs_10880 2 0 4 PTBP1 POSTAR2 GSE19323,GSM480479 chr15:63358160-63358200
64251 chr15 63363737 63363737 1 + T C rs707602 63363751 + 63363731 63363771 41 TGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCA TGCTACCTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCA < 41bp 1 0.198736680773996 1 0.0736834704875946 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363751 chr15:63363737 . . 0 7 hm5C_associated_SNPs_10881 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63363714-63363737
64251 chr15 63363737 63363737 1 + T C rs707602 63363752 + 63363732 63363772 41 GCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAA GCTACCTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAA < 41bp 1 0.450401767770086 1 0.103426545858383 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363752 chr15:63363737 . . 0 6 hm5C_associated_SNPs_10882 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63363714-63363737
64251 chr15 63363737 63363737 1 + T C rs707602 63363753 + 63363733 63363773 41 CTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAAC CTACCTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAAC < 41bp 1 0.238200157565552 1 0.065373569726944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363753 chr15:63363737 . . 0 5 hm5C_associated_SNPs_10883 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63363714-63363737
64251 chr15 63363737 63363737 1 + T C rs707602 63363754 + 63363734 63363774 41 TACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACA TACCTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACA < 41bp 1 0.165094684578655 1 0.0909264981746674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363754 chr15:63363737 . . 0 4 hm5C_associated_SNPs_10884 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63363714-63363737
64251 chr15 63363737 63363737 1 + T C rs707602 63363755 + 63363735 63363775 41 ACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACAT ACCTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACAT < 41bp 1 0.65617864247765 1 0.0879324972629547 experiment 0.687642715044699 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363755 chr15:63363737 . . 0 3 hm5C_associated_SNPs_10885 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63363714-63363737
64251 chr15 63363750 63363750 1 + T A rs74024306 63363751 + 63363731 63363771 41 TGCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCA TGCTACTTTGAACAAAAGGACCCCCTGTGGTCTTTTGTTCA < 41bp 1 0.167326002180267 1 0.0625934898853302 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363751 chr15:63363750 . . 0 20 hm5C_associated_SNPs_10886 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63363732-63363757
64251 chr15 63363750 63363750 1 + T A rs74024306 63363752 + 63363732 63363772 41 GCTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAA GCTACTTTGAACAAAAGGACCCCCTGTGGTCTTTTGTTCAA < 41bp 1 0.476884662726468 1 0.0877615809440613 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363752 chr15:63363750 . . 0 19 hm5C_associated_SNPs_10887 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63363732-63363757
64251 chr15 63363750 63363750 1 + T A rs74024306 63363753 + 63363733 63363773 41 CTACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAAC CTACTTTGAACAAAAGGACCCCCTGTGGTCTTTTGTTCAAC < 41bp 1 0.234140989444875 1 0.0444408059120178 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363753 chr15:63363750 . . 0 18 hm5C_associated_SNPs_10888 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63363732-63363757
64251 chr15 63363750 63363750 1 + T A rs74024306 63363754 + 63363734 63363774 41 TACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACA TACTTTGAACAAAAGGACCCCCTGTGGTCTTTTGTTCAACA < 41bp 1 0.150152229465161 1 0.0715095698833466 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363754 chr15:63363750 . . 0 17 hm5C_associated_SNPs_10889 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63363732-63363757
64251 chr15 63363750 63363750 1 + T A rs74024306 63363755 + 63363735 63363775 41 ACTTTGAACAAAAGGTCCCCCTGTGGTCTTTTGTTCAACAT ACTTTGAACAAAAGGACCCCCTGTGGTCTTTTGTTCAACAT < 41bp 1 0.684933896998732 1 0.0724163055419922 experiment 0.630132206002536 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM1 ENSG00000259627 ncRNA_intronic Human antisense chr15:63363755 chr15:63363750 . . 0 16 hm5C_associated_SNPs_10890 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63363732-63363757
64251 chr15 63481799 63481799 1 + C G rs551855409 63481812 + 63481792 63481832 41 TGGCTCCCCGGTCAGAGGGCCGGAGCGAGAAGATGGCGAAG TGGCTCCGCGGTCAGAGGGCCGGAGCGAGAAGATGGCGAAG < 41bp 1 0.740087375795222 1 0.617326021194458 experiment 0.519825248409557 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB8B ENSG00000166128 UTR5 Human protein_coding chr15:63481812 chr15:63481799 . . 0 8 hm5C_associated_SNPs_10894 0 0 1 DDX3X POSTAR2 ENCODE chr15:63481784-63481936
64251 chr15 63481801 63481801 1 + G A rs202134870 63481811 + 63481791 63481831 41 CTGGCTCCCCGGTCAGAGGGCCGGAGCGAGAAGATGGCGAA CTGGCTCCCCAGTCAGAGGGCCGGAGCGAGAAGATGGCGAA < 41bp 1 0.794521301431971 1 0.780786275863647 experiment 0.410957397136057 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB8B ENSG00000166128 UTR5 Human protein_coding chr15:63481811 chr15:63481801 . . 0 11 hm5C_associated_SNPs_10895 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr15:63481800-63481820
64251 chr15 63481801 63481801 1 + G A rs202134870 63481812 + 63481792 63481832 41 TGGCTCCCCGGTCAGAGGGCCGGAGCGAGAAGATGGCGAAG TGGCTCCCCAGTCAGAGGGCCGGAGCGAGAAGATGGCGAAG < 41bp 1 0.678604892343456 1 0.611004948616028 experiment 0.642790215313089 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB8B ENSG00000166128 UTR5 Human protein_coding chr15:63481812 chr15:63481801 . . 0 10 hm5C_associated_SNPs_10896 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr15:63481800-63481820
64251 chr15 64388275 64388275 1 + G A rs115947230 64388268 + 64388248 64388288 41 GAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTCCG GAGACTGCCTCCGCCCTTCCCCGGCCTAGAGCCGGAGTCCG < 41bp 1 0.540640634935031 1 0.776137411594391 experiment 0.918718730129938 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64388268 chr15:64388275 synonymous SNV . 0 28 hm5C_associated_SNPs_10897 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:64388250-64388275
64251 chr15 64410352 64410352 1 + A T rs186954122 64410334 + 64410314 64410354 41 AGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATA AGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAATTA < 41bp 1 0.0550305156308263 1 0.121585607528687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410334 chr15:64410352 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_10898 0 0 3 BUD13 POSTAR2 ENCODE chr15:64410314-64410361
64251 chr15 64418397 64418397 1 + G A rs1130603 64418395 + 64418375 64418415 41 AGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTC AGAATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTC < 41bp 1 0.0608011998826184 1 0.258761823177338 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418395 chr15:64418397 synonymous SNV . 0 23 hm5C_associated_SNPs_10899 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418397 64418397 1 + G A rs1130603 64418396 + 64418376 64418416 41 GAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCA GAATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTCA < 41bp 1 0.159650781781987 1 0.158438324928284 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418396 chr15:64418397 synonymous SNV . 0 22 hm5C_associated_SNPs_10900 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418397 64418397 1 + G A rs1130603 64418398 + 64418378 64418418 41 ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA ATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTCATA < 41bp 1 0.144864498668944 1 0.0439735949039459 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418398 chr15:64418397 synonymous SNV . 0 20 hm5C_associated_SNPs_10901 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64434053 64434053 1 + G A rs141694206 64434067 + 64434047 64434087 41 AGTTTCGGAACCACTGAGATCGGTCCTTGATTTGATGAGAG AGTTTCAGAACCACTGAGATCGGTCCTTGATTTGATGAGAG < 41bp 1 0.435909915848618 1 0.388641148805618 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX1 ENSG00000028528 UTR3 Human protein_coding chr15:64434067 chr15:64434053 . . 0 7 hm5C_associated_SNPs_10902 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:64434023-64434078
64251 chr15 64448293 64448293 1 - G A rs530126062 64448276 - 64448256 64448296 41 CCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGATCGA CCCTTGAAGGATGTGATCATCGCAGACTGCGGCAAGATCGA < 41bp 1 0.719878869833358 1 0.439964234828949 experiment 0.560242260333283 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448276 chr15:64448293 synonymous SNV . 0 4 hm5C_associated_SNPs_10903 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448293 64448293 1 - G A rs530126062 64448279 - 64448259 64448299 41 AAACCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGAT AAACCCTTGAAGGATGTGATCATCGCAGACTGCGGCAAGAT < 41bp 1 0.378709548511762 1 0.0371904373168945 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448279 chr15:64448293 synonymous SNV . 0 7 hm5C_associated_SNPs_10904 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64967519 64967519 1 + G T rs77465580 64967515 + 64967495 64967535 41 AAACACTACCCCTACTCAGCCCCTGACTCCCTTACATGTGG AAACACTACCCCTACTCAGCCCCTTACTCCCTTACATGTGG < 41bp 1 0.0209140341585262 1 0.0458516180515289 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64967515 chr15:64967519 synonymous SNV . 0 25 hm5C_associated_SNPs_10905 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:64967494-64967527
64251 chr15 64974992 64974992 1 + C A rs544345310 64975009 + 64974989 64975029 41 CAGCCCAATTCCTCTGTCTACAAGTACATGATTTTATATAG CAGACCAATTCCTCTGTCTACAAGTACATGATTTTATATAG < 41bp 1 0.212763727222332 1 0.424635112285614 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF609 ENSG00000180357 UTR3 Human protein_coding chr15:64975009 chr15:64974992 . . 0 4 hm5C_associated_SNPs_10906 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:64974969-64975007
64251 chr15 64975614 64975614 1 + C T rs76580542 64975595 + 64975575 64975615 41 GGAACCCTACACTTGAGAGGCTTAGGGTCACCATCTGCTCA GGAACCCTACACTTGAGAGGCTTAGGGTCACCATCTGCTTA < 41bp 1 0.134225319901759 1 0.101814776659012 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF609 ENSG00000180357 UTR3 Human protein_coding chr15:64975595 chr15:64975614 . . 0 40 hm5C_associated_SNPs_10907 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr15:64975582-64975616
64251 chr15 66161839 66161839 1 + C T rs577327021 66161828 + 66161808 66161848 41 GGGCTCTTCACCCAGTCCGGCAGTTGAAGCTCGGCGCTCGG GGGCTCTTCACCCAGTCCGGCAGTTGAAGCTTGGCGCTCGG < 41bp 1 0.372092644151789 1 0.183308303356171 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAB11A ENSG00000103769 UTR5 Human protein_coding chr15:66161828 chr15:66161839 . . 0 32 hm5C_associated_SNPs_10909 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:66161820-66161840
64251 chr15 66783610 66783610 1 + G A rs8684 66783627 + 66783607 66783647 41 TCAGTATACTGTGTGGGATACTTAGTGGTATGTCTCTTTAA TCAATATACTGTGTGGGATACTTAGTGGTATGTCTCTTTAA < 41bp 1 0.17492893988731 1 0.0416848659515381 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAP2K1 ENSG00000261351 ncRNA_intronic Human antisense chr15:66783627 chr15:66783610 . . 0 4 hm5C_associated_SNPs_10910 2 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr15:66783500-66783693
64251 chr15 66995860 66995860 1 + C A rs547033777 66995871 + 66995851 66995891 41 CGCAGGGGGCCCCCCGAGGCCCATGTCGGAGCCAGGGGCCG CGCAGGGGGACCCCCGAGGCCCATGTCGGAGCCAGGGGCCG < 41bp 1 0.292105183842099 1 0.0880599021911621 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:66995871 chr15:66995860 synonymous SNV . 0 10 hm5C_associated_SNPs_10914 0 0 1 EWSR1 POSTAR2 ENCODE chr15:66995832-66995880
64251 chr15 66996307 66996307 1 + C T rs144415105 66996309 + 66996289 66996329 41 CTGGCCCGACCTGCAGCACGCCGTGGAGCTGAAGCCCCTGT CTGGCCCGACCTGCAGCATGCCGTGGAGCTGAAGCCCCTGT < 41bp 1 0.240194475135238 1 0.198065429925919 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:66996309 chr15:66996307 synonymous SNV . 0 19 hm5C_associated_SNPs_10915 1 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:66996288-66996318
64251 chr15 67073638 67073638 1 + C T rs145093897 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGTGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT < 41bp 1 0.5053890847067 1 0.401107728481293 experiment 0.989221830586599 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073638 nonsynonymous SNV 0.987 1 8 hm5C_associated_SNPs_10916 0 0 3 METAP2 POSTAR2 ENCODE chr15:67073613-67073666
64251 chr15 67358478 67358478 1 + G A rs1061427 67358461 + 67358441 67358481 41 GAGCCCAGCCCCGCCGGGGGCGCTCCTCGCCGCCCGCGCGC GAGCCCAGCCCCGCCGGGGGCGCTCCTCGCCGCCCGCACGC < 41bp 1 0.593973784313727 1 0.262444168329239 experiment 0.812052431372547 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD3 ENSG00000166949 UTR5 Human protein_coding chr15:67358461 chr15:67358478 . . 0 38 hm5C_associated_SNPs_10921 3 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:67358472-67358521
64251 chr15 67483192 67483192 1 + G A rs79368607 67483198 + 67483178 67483218 41 CAGACTCTTTTTTTGAGTGACAGCTTTCTGGGATGTCACAG CAGACTCTTTTTTTAAGTGACAGCTTTCTGGGATGTCACAG < 41bp 1 0.270086697914374 1 0.0615594387054443 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483198 chr15:67483192 . . 0 15 hm5C_associated_SNPs_10922 2 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483166-67483192
64251 chr15 67483483 67483483 1 + A C rs564556206 67483466 + 67483446 67483486 41 GGAGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATAC GGAGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTAC < 41bp 1 0.0417734876272874 1 0.303923070430756 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483466 chr15:67483483 . . 0 38 hm5C_associated_SNPs_10923 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483467 + 67483447 67483487 41 GAGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACT GAGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACT < 41bp 1 0.0111601556660615 1 0.15690666437149 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483467 chr15:67483483 . . 0 37 hm5C_associated_SNPs_10924 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483468 + 67483448 67483488 41 AGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTG AGGGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACTG < 41bp 1 0.23146145362025 1 0.235073834657669 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483468 chr15:67483483 . . 0 36 hm5C_associated_SNPs_10925 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483470 + 67483450 67483490 41 GGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTGAT GGAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACTGAT < 41bp 1 0.105909215374834 1 0.253874719142914 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483470 chr15:67483483 . . 0 34 hm5C_associated_SNPs_10926 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483471 + 67483451 67483491 41 GAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTGATT GAGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACTGATT < 41bp 1 0.0121489790974853 1 0.129137396812439 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483471 chr15:67483483 . . 0 33 hm5C_associated_SNPs_10927 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483472 + 67483452 67483492 41 AGTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTGATTG AGTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACTGATTG < 41bp 1 0.0370798516895098 1 0.0737323760986328 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483472 chr15:67483483 . . 0 32 hm5C_associated_SNPs_10928 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67483483 67483483 1 + A C rs564556206 67483473 + 67483453 67483493 41 GTTTTGTCTGTCTCCCTCCCCTCTCAGAACATACTGATTGG GTTTTGTCTGTCTCCCTCCCCTCTCAGAACCTACTGATTGG < 41bp 1 0.0787286287589336 1 0.171588599681854 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483473 chr15:67483483 . . 0 31 hm5C_associated_SNPs_10929 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:67483462-67483488
64251 chr15 67485822 67485822 1 + C T rs183703685 67485820 + 67485800 67485840 41 AGTAACTTAGATGCTTCCAGCACATACGTAGGTAGCTACCC AGTAACTTAGATGCTTCCAGCATATACGTAGGTAGCTACCC < 41bp 1 0.14863830284535 1 0.364990383386612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485820 chr15:67485822 . . 0 23 hm5C_associated_SNPs_10930 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr15:67485801-67485827
64251 chr15 67485831 67485831 1 + G C rs143339480 67485820 + 67485800 67485840 41 AGTAACTTAGATGCTTCCAGCACATACGTAGGTAGCTACCC AGTAACTTAGATGCTTCCAGCACATACGTAGCTAGCTACCC < 41bp 1 0.286964749450992 1 0.2359858751297 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485820 chr15:67485831 . . 0 32 hm5C_associated_SNPs_10931 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:67485828-67485871
64251 chr15 67485834 67485834 1 + G C rs151326457 67485820 + 67485800 67485840 41 AGTAACTTAGATGCTTCCAGCACATACGTAGGTAGCTACCC AGTAACTTAGATGCTTCCAGCACATACGTAGGTACCTACCC < 41bp 1 0.329956476531652 1 0.337749809026718 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485820 chr15:67485834 . . 0 35 hm5C_associated_SNPs_10932 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:67485828-67485871
64251 chr15 67485836 67485836 1 + T C rs188022958 67485820 + 67485800 67485840 41 AGTAACTTAGATGCTTCCAGCACATACGTAGGTAGCTACCC AGTAACTTAGATGCTTCCAGCACATACGTAGGTAGCCACCC < 41bp 1 0.33696410456009 1 0.264499127864838 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67485820 chr15:67485836 . . 0 37 hm5C_associated_SNPs_10933 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr15:67485828-67485871
64251 chr15 68480086 68480086 1 + A G rs191408288 68480074 + 68480054 68480094 41 AGCAGCCTGGTTTCTTCCAACAGCCTAAGGGAAAGCCATAG AGCAGCCTGGTTTCTTCCAACAGCCTAAGGGAGAGCCATAG < 41bp 1 0.503073108616658 1 0.403168261051178 experiment 0.993853782766684 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68480074 chr15:68480086 synonymous SNV . 0 33 hm5C_associated_SNPs_10935 0 0 1 RBM15 POSTAR2 ENCODE chr15:68480066-68480110
64251 chr15 69728949 69728949 1 + A G rs3825858 69728947 + 69728927 69728967 41 TGCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGAT TGCAGAGTTTTCCACCTTTGCCGTCATGCGAAATTTTGGAT < 41bp 1 0.100620111478951 1 0.119483143091202 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728947 chr15:69728949 synonymous SNV . 0 23 hm5C_associated_SNPs_10939 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:69728928-69728949
64251 chr15 69728949 69728949 1 + A G rs3825858 69728948 + 69728928 69728968 41 GCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGATA GCAGAGTTTTCCACCTTTGCCGTCATGCGAAATTTTGGATA < 41bp 1 0.641020770892182 1 0.135250508785248 experiment 0.717958458215637 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728948 chr15:69728949 synonymous SNV . 0 22 hm5C_associated_SNPs_10940 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:69728928-69728949
64251 chr15 69729049 69729049 1 + T C rs17310879 69729054 + 69729034 69729074 41 ATGATGATTGATGAGTTTAACAAACAATGTAAGGGCAAAAC ATGATGATTGATGAGCTTAACAAACAATGTAAGGGCAAAAC < 41bp 1 0.184525737324184 1 0.402299344539642 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69729054 chr15:69729049 nonsynonymous SNV 0.339 0 16 hm5C_associated_SNPs_10941 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:69729001-69729051
64251 chr15 69737221 69737221 1 + C T rs200472874 69737220 + 69737200 69737240 41 CAGATGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTG CAGATGGGTAGATCATAAGCCTGCCTCTAACATGCAAACTG < 41bp 1 0.416103042540685 1 0.0383240580558777 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737220 chr15:69737221 synonymous SNV . 0 22 hm5C_associated_SNPs_10942 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:69737202-69737222
64251 chr15 69737221 69737221 1 + C T rs200472874 69737224 + 69737204 69737244 41 TGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTGAAAC TGGGTAGATCATAAGCCTGCCTCTAACATGCAAACTGAAAC < 41bp 1 0.342427137895674 1 0.155661940574646 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737224 chr15:69737221 synonymous SNV . 0 18 hm5C_associated_SNPs_10943 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:69737202-69737222
64251 chr15 74319874 74319874 1 + A G rs186120660 74319875 + 74319855 74319895 41 CTGCATTGTAGCGTGAGTGACAGAGTGAGACCCTGTCTCAA CTGCATTGTAGCGTGAGTGGCAGAGTGAGACCCTGTCTCAA < 41bp 1 0.208739382630984 1 0.784396231174469 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PML ENSG00000140464 intronic Human protein_coding chr15:74319875 chr15:74319874 . . 0 20 hm5C_associated_SNPs_10945 0 0 2 UPF1 POSTAR2 ENCODE chr15:74319828-74319892
64251 chr15 74913800 74913800 1 + C T rs567613547 74913796 + 74913776 74913816 41 GGCTGGTGGCAGGAGGGCTGCTGACGGAAGGCTGTTTCTGG GGCTGGTGGCAGGAGGGCTGCTGATGGAAGGCTGTTTCTGG < 41bp 1 0.394933867278565 1 0.270706832408905 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CLK3 ENSG00000179335 intronic Human protein_coding chr15:74913796 chr15:74913800 . . 0 25 hm5C_associated_SNPs_10949 0 0 5 HNRNPM POSTAR2 ENCODE chr15:74913764-74913825
64251 chr15 75190274 75190274 1 + G A rs562995056 75190285 + 75190265 75190305 41 GAGAGGCCCGTGTGAGGGGTCTGATACTCCCTTTGTCTTCC GAGAGGCCCATGTGAGGGGTCTGATACTCCCTTTGTCTTCC < 41bp 1 0.563057971259489 1 0.0897839665412903 experiment 0.873884057481023 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MPI ENSG00000178802 UTR3 Human protein_coding chr15:75190285 chr15:75190274 . . 0 10 hm5C_associated_SNPs_10952 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr15:75190226-75190276
64251 chr15 75632432 75632432 1 + G T rs188362483 75632451 + 75632431 75632471 41 GGTTCTAGGATGCTGAGGCCCTGGCCCGGACTCTGGCCTCC GTTTCTAGGATGCTGAGGCCCTGGCCCGGACTCTGGCCTCC < 41bp 1 0.746896341591653 1 0.129426926374435 experiment 0.506207316816693 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COMMD4 ENSG00000140365 UTR3 Human protein_coding chr15:75632451 chr15:75632432 . . 0 2 hm5C_associated_SNPs_10956 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:75632329-75632453
64251 chr15 76196246 76196246 1 + C G rs78630828 76196236 + 76196216 76196256 41 CTCAGTGCGCGCCGGCCGGGCAACCCTATGCTGGCGTAATC CTCAGTGCGCGCCGGCCGGGCAACCCTATGGTGGCGTAATC < 41bp 1 0.431079446648609 1 0.306751430034637 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FBXO22 ENSG00000167196 UTR5 Human protein_coding chr15:76196236 chr15:76196246 . . 0 31 hm5C_associated_SNPs_10958 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr15:76196235-76196256
64251 chr15 76196247 76196247 1 + T G rs149601564 76196236 + 76196216 76196256 41 CTCAGTGCGCGCCGGCCGGGCAACCCTATGCTGGCGTAATC CTCAGTGCGCGCCGGCCGGGCAACCCTATGCGGGCGTAATC < 41bp 1 0.430806323935226 1 0.189368277788162 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FBXO22 ENSG00000167196 UTR5 Human protein_coding chr15:76196236 chr15:76196247 . . 0 32 hm5C_associated_SNPs_10959 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr15:76196235-76196256
64251 chr15 77776714 77776714 1 + G T rs7497247 77776694 + 77776674 77776714 41 TTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTAAAG TTTTTGTTTTTGTTTTGACACTGCAGAGCACAAGGCTAAAT < 41bp 1 0.794088979306154 1 0.142780214548111 experiment 0.411822041387693 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77776694 chr15:77776714 . . 0 41 hm5C_associated_SNPs_10960 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:77776634-77776749
64251 chr15 78458638 78458638 1 + C T rs2304826 78458628 + 78458608 78458648 41 TGAGGCTGCGTGTTTTGCTACAATTAAGGACGGAAAGGTAA TGAGGCTGCGTGTTTTGCTACAATTAAGGATGGAAAGGTAA < 41bp 1 0.157906347018383 1 0.0463123321533203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IDH3A ENSG00000166411 CDS Human protein_coding chr15:78458628 chr15:78458638 synonymous SNV . 0 31 hm5C_associated_SNPs_10961 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:78458566-78458640
64251 chr15 78792487 78792487 1 + C G rs113739008 78792477 + 78792457 78792497 41 GCTGGGATTACAGGTGTGAGCCACCACACCCGGCCTATATT GCTGGGATTACAGGTGTGAGCCACCACACCGGGCCTATATT < 41bp 1 0.399452953751184 1 0.201663225889206 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78792477 chr15:78792487 . . 0 31 hm5C_associated_SNPs_10962 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:78792476-78792503
64251 chr15 78792487 78792487 1 + C G rs113739008 78792480 + 78792460 78792500 41 GGGATTACAGGTGTGAGCCACCACACCCGGCCTATATTGTT GGGATTACAGGTGTGAGCCACCACACCGGGCCTATATTGTT < 41bp 1 0.524696426086752 1 0.345049798488617 experiment 0.950607147826495 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78792480 chr15:78792487 . . 0 28 hm5C_associated_SNPs_10963 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:78792476-78792503
64251 chr15 78792487 78792487 1 + C G rs113739008 78792481 + 78792461 78792501 41 GGATTACAGGTGTGAGCCACCACACCCGGCCTATATTGTTT GGATTACAGGTGTGAGCCACCACACCGGGCCTATATTGTTT < 41bp 1 0.479595332101603 1 0.268430978059769 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78792481 chr15:78792487 . . 0 27 hm5C_associated_SNPs_10964 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:78792476-78792503
64251 chr15 78833256 78833256 1 + A G rs150231852 78833244 + 78833224 78833264 41 GTGCTGTGCCCGGCGTCAGGCGTGGAGACAACAGAAAGTTG GTGCTGTGCCCGGCGTCAGGCGTGGAGACAACGGAAAGTTG < 41bp 1 0.697363618557168 1 0.72403621673584 experiment 0.605272762885663 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PSMA4 ENSG00000041357 UTR5 Human protein_coding chr15:78833244 chr15:78833256 . . 0 33 hm5C_associated_SNPs_10965 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr15:78833229-78833257
64251 chr15 79152936 79152936 1 + T C rs59724511 79152916 + 79152896 79152936 41 CTCTAACTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACT CTCTAACTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACC < 41bp 1 0.364956478918957 1 0.449207544326782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152916 chr15:79152936 . . 0 41 hm5C_associated_SNPs_10967 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152920 + 79152900 79152940 41 AACTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTA AACTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACCCTTA < 41bp 1 0.682998429797684 1 0.527726352214813 experiment 0.634003140404632 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152920 chr15:79152936 . . 0 37 hm5C_associated_SNPs_10968 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152928 + 79152908 79152948 41 GGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGG GGCTAGCTCAGTCGGTAGAGCATGGGACCCTTAATCCCAGG < 41bp 1 0.621827721311577 1 0.63689774274826 experiment 0.756344557376846 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152928 chr15:79152936 . . 0 29 hm5C_associated_SNPs_10969 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152935 + 79152915 79152955 41 TCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGG TCAGTCGGTAGAGCATGGGACCCTTAATCCCAGGGTCGTGG < 41bp 1 0.0407511214621909 1 0.0134864151477814 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152935 chr15:79152936 . . 0 22 hm5C_associated_SNPs_10970 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152943 + 79152923 79152963 41 TAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC TAGAGCATGGGACCCTTAATCCCAGGGTCGTGGGTTCGAGC < 41bp 1 0.437386483140468 1 0.845141649246216 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152943 chr15:79152936 . . 0 14 hm5C_associated_SNPs_10971 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152944 + 79152924 79152964 41 AGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCC AGAGCATGGGACCCTTAATCCCAGGGTCGTGGGTTCGAGCC < 41bp 1 0.731560544761165 1 0.762385785579681 experiment 0.536878910477669 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152944 chr15:79152936 . . 0 13 hm5C_associated_SNPs_10972 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152936 79152936 1 + T C rs59724511 79152951 + 79152931 79152971 41 GGGACTCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTT GGGACCCTTAATCCCAGGGTCGTGGGTTCGAGCCCCACGTT < 41bp 1 0.619353562154394 1 0.541346073150635 experiment 0.761292875691213 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152951 chr15:79152936 . . 0 6 hm5C_associated_SNPs_10973 0 0 22 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:79152880-79152960
64251 chr15 79152975 79152975 1 + C G rs117252182 79152959 + 79152939 79152979 41 TAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGGT TAATCCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGGGGGT < 41bp 1 0.424775860586284 1 0.309233754873276 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152959 chr15:79152975 . . 0 37 hm5C_associated_SNPs_10974 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:79152958-79152985
64251 chr15 79152975 79152975 1 + C G rs117252182 79152963 + 79152943 79152983 41 CCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGGTTTGT CCCAGGGTCGTGGGTTCGAGCCCCACGTTGGGGGGGTTTGT < 41bp 1 0.334497221040737 1 0.137205004692078 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152963 chr15:79152975 . . 0 33 hm5C_associated_SNPs_10975 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:79152958-79152985
64251 chr15 79152975 79152975 1 + C G rs117252182 79152966 + 79152946 79152986 41 AGGGTCGTGGGTTCGAGCCCCACGTTGGGCGGGTTTGTTTT AGGGTCGTGGGTTCGAGCCCCACGTTGGGGGGGTTTGTTTT < 41bp 1 0.463494976689506 1 0.500787913799286 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ADAMTS7;MORF4L1 ENSG00000185787 intronic Human protein_coding chr15:79152966 chr15:79152975 . . 0 30 hm5C_associated_SNPs_10976 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:79152958-79152985
64251 chr15 79185898 79185898 1 + C A rs1435163 79185883 + 79185863 79185903 41 ATATTTTTGTCTTCATAGCTCTTTTATCTTCCTGCCAAGAA ATATTTTTGTCTTCATAGCTCTTTTATCTTCCTGCAAAGAA < 41bp 1 0.037060214704337 1 0.0490189790725708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79185883 chr15:79185898 synonymous SNV . 0 36 hm5C_associated_SNPs_10977 0 0 3 DDX6 POSTAR2 ENCODE chr15:79185884-79185899
64251 chr15 79615168 79615168 1 + C G rs74326713 79615183 + 79615163 79615203 41 AAAAACTAAGTGTGAGCGTCCTGGAGACTTGTGCCTTTATT AAAAAGTAAGTGTGAGCGTCCTGGAGACTTGTGCCTTTATT < 41bp 1 0.615777306460137 1 0.766409397125244 experiment 0.768445387079726 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615183 chr15:79615168 . . 0 6 hm5C_associated_SNPs_10978 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79615112-79615170
64251 chr15 79615180 79615180 1 + G A rs139872152 79615183 + 79615163 79615203 41 AAAAACTAAGTGTGAGCGTCCTGGAGACTTGTGCCTTTATT AAAAACTAAGTGTGAGCATCCTGGAGACTTGTGCCTTTATT < 41bp 1 0.671713283673921 1 0.789909362792969 experiment 0.656573432652158 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMED3 ENSG00000166557 UTR3 Human protein_coding chr15:79615183 chr15:79615180 . . 0 18 hm5C_associated_SNPs_10979 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr15:79615163-79615185
64251 chr15 80036998 80036998 1 + G A rs145909576 80037007 + 80036987 80037027 41 AACAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGA AACAGTTGAAGAGGGTATAGCTCAGTGGGTAGAGCATTTGA < 41bp 1 0.492964083689223 1 0.424968332052231 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037007 chr15:80036998 . . 0 12 hm5C_associated_SNPs_10980 0 0 43 EIF3D POSTAR2 GSE65004,GSM1585671 chr15:80036980-80037000
64251 chr15 80036998 80036998 1 + G A rs145909576 80037009 + 80036989 80037029 41 CAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGACT CAGTTGAAGAGGGTATAGCTCAGTGGGTAGAGCATTTGACT < 41bp 1 0.47514040488108 1 0.541272044181824 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037009 chr15:80036998 . . 0 10 hm5C_associated_SNPs_10981 0 0 43 EIF3D POSTAR2 GSE65004,GSM1585671 chr15:80036980-80037000
64251 chr15 80037002 80037002 1 + T G rs138601653 80037007 + 80036987 80037027 41 AACAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGA AACAGTTGAAGGGGGGATAGCTCAGTGGGTAGAGCATTTGA < 41bp 1 0.575438250237996 1 0.629554390907288 experiment 0.849123499524008 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037007 chr15:80037002 . . 0 16 hm5C_associated_SNPs_10982 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037002 80037002 1 + T G rs138601653 80037009 + 80036989 80037029 41 CAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGACT CAGTTGAAGGGGGGATAGCTCAGTGGGTAGAGCATTTGACT < 41bp 1 0.572470581322515 1 0.697182893753052 experiment 0.85505883735497 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037009 chr15:80037002 . . 0 14 hm5C_associated_SNPs_10983 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037002 80037002 1 + T G rs138601653 80037021 + 80037001 80037041 41 GTATAGCTCAGTGGGTAGAGCATTTGACTGCAGATCAAGAG GGATAGCTCAGTGGGTAGAGCATTTGACTGCAGATCAAGAG < 41bp 1 0.124045444930226 1 0.0689064860343933 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037021 chr15:80037002 . . 0 2 hm5C_associated_SNPs_10984 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037003 80037003 1 + A G rs370723787 80037007 + 80036987 80037027 41 AACAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGA AACAGTTGAAGGGGGTGTAGCTCAGTGGGTAGAGCATTTGA < 41bp 1 0.504969638073292 1 0.38787853717804 experiment 0.990060723853416 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037007 chr15:80037003 . . 0 17 hm5C_associated_SNPs_10985 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037003 80037003 1 + A G rs370723787 80037009 + 80036989 80037029 41 CAGTTGAAGGGGGTATAGCTCAGTGGGTAGAGCATTTGACT CAGTTGAAGGGGGTGTAGCTCAGTGGGTAGAGCATTTGACT < 41bp 1 0.522876238317309 1 0.659955739974976 experiment 0.954247523365382 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037009 chr15:80037003 . . 0 15 hm5C_associated_SNPs_10986 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037003 80037003 1 + A G rs370723787 80037021 + 80037001 80037041 41 GTATAGCTCAGTGGGTAGAGCATTTGACTGCAGATCAAGAG GTGTAGCTCAGTGGGTAGAGCATTTGACTGCAGATCAAGAG < 41bp 1 0.124307553802878 1 0.0701411664485931 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037021 chr15:80037003 . . 0 3 hm5C_associated_SNPs_10987 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr15:80036980-80037020
64251 chr15 80037049 80037049 1 + G C rs536392457 80037031 + 80037011 80037051 41 GTGGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTT GTGGGTAGAGCATTTGACTGCAGATCAAGAGGTCCCCGCTT < 41bp 1 0.456619510030122 1 0.757487416267395 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037031 chr15:80037049 . . 0 39 hm5C_associated_SNPs_10988 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037036 + 80037016 80037056 41 TAGAGCATTTGACTGCAGATCAAGAGGTCCCCGGTTCAAAT TAGAGCATTTGACTGCAGATCAAGAGGTCCCCGCTTCAAAT < 41bp 1 0.73730685560988 1 0.513246178627014 experiment 0.52538628878024 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037036 chr15:80037049 . . 0 34 hm5C_associated_SNPs_10989 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037044 + 80037024 80037064 41 TTGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGC TTGACTGCAGATCAAGAGGTCCCCGCTTCAAATCCGGGTGC < 41bp 1 0.247229246217592 1 0.0596183836460114 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037044 chr15:80037049 . . 0 26 hm5C_associated_SNPs_10990 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037045 + 80037025 80037065 41 TGACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCC TGACTGCAGATCAAGAGGTCCCCGCTTCAAATCCGGGTGCC < 41bp 1 0.155204732422165 1 0.0798411667346954 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037045 chr15:80037049 . . 0 25 hm5C_associated_SNPs_10991 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037046 + 80037026 80037066 41 GACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCC GACTGCAGATCAAGAGGTCCCCGCTTCAAATCCGGGTGCCC < 41bp 1 0.195049974691898 1 0.047564297914505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037046 chr15:80037049 . . 0 24 hm5C_associated_SNPs_10992 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037047 + 80037027 80037067 41 ACTGCAGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCC ACTGCAGATCAAGAGGTCCCCGCTTCAAATCCGGGTGCCCC < 41bp 1 0.205391489152669 1 0.0924245417118073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037047 chr15:80037049 . . 0 23 hm5C_associated_SNPs_10993 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037052 + 80037032 80037072 41 AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCC AGATCAAGAGGTCCCCGCTTCAAATCCGGGTGCCCCCTGCC < 41bp 1 0.214206815858872 1 0.355273395776749 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037052 chr15:80037049 . . 0 18 hm5C_associated_SNPs_10994 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037057 + 80037037 80037077 41 AAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAA AAGAGGTCCCCGCTTCAAATCCGGGTGCCCCCTGCCTGAAA < 41bp 1 0.587939156380717 1 0.884669482707977 experiment 0.824121687238565 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037057 chr15:80037049 . . 0 13 hm5C_associated_SNPs_10995 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037058 + 80037038 80037078 41 AGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAG AGAGGTCCCCGCTTCAAATCCGGGTGCCCCCTGCCTGAAAG < 41bp 1 0.69441195937354 1 0.845267713069916 experiment 0.611176081252919 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037058 chr15:80037049 . . 0 12 hm5C_associated_SNPs_10996 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037066 + 80037046 80037086 41 CCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTA CCGCTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTA < 41bp 1 0.0708648030763682 1 0.0592817366123199 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037066 chr15:80037049 . . 0 4 hm5C_associated_SNPs_10997 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037067 + 80037047 80037087 41 CGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTAC CGCTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTAC < 41bp 1 0.0756733438610625 1 0.11263570189476 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037067 chr15:80037049 . . 0 3 hm5C_associated_SNPs_10998 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037049 80037049 1 + G C rs536392457 80037068 + 80037048 80037088 41 GGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTACT GCTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTACT < 41bp 1 0.344425548426306 1 0.35573023557663 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037068 chr15:80037049 . . 0 2 hm5C_associated_SNPs_10999 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037068 80037068 1 + C G rs185560627 80037052 + 80037032 80037072 41 AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCC AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCGTGCC < 41bp 1 0.2216363530402 1 0.248616009950638 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037052 chr15:80037068 . . 0 37 hm5C_associated_SNPs_11000 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037068 80037068 1 + C G rs185560627 80037057 + 80037037 80037077 41 AAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAA AAGAGGTCCCCGGTTCAAATCCGGGTGCCCCGTGCCTGAAA < 41bp 1 0.640361057971253 1 0.91515439748764 experiment 0.719277884057493 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037057 chr15:80037068 . . 0 32 hm5C_associated_SNPs_11001 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037068 80037068 1 + C G rs185560627 80037058 + 80037038 80037078 41 AGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAG AGAGGTCCCCGGTTCAAATCCGGGTGCCCCGTGCCTGAAAG < 41bp 1 0.703617143726155 1 0.882866024971008 experiment 0.592765712547691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037058 chr15:80037068 . . 0 31 hm5C_associated_SNPs_11002 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037068 80037068 1 + C G rs185560627 80037066 + 80037046 80037086 41 CCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTA CCGGTTCAAATCCGGGTGCCCCGTGCCTGAAAGTTTTCTTA < 41bp 1 0.107680861502626 1 0.0715497434139252 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037066 chr15:80037068 . . 0 23 hm5C_associated_SNPs_11003 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037068 80037068 1 + C G rs185560627 80037067 + 80037047 80037087 41 CGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTAC CGGTTCAAATCCGGGTGCCCCGTGCCTGAAAGTTTTCTTAC < 41bp 1 0.236436362432538 1 0.0802614688873291 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037067 chr15:80037068 . . 0 22 hm5C_associated_SNPs_11004 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037052 + 80037032 80037072 41 AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCC AGATCAAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCAGCC < 41bp 1 0.235835598978138 1 0.305403172969818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037052 chr15:80037069 . . 0 38 hm5C_associated_SNPs_11005 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037057 + 80037037 80037077 41 AAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAA AAGAGGTCCCCGGTTCAAATCCGGGTGCCCCCAGCCTGAAA < 41bp 1 0.622430643773934 1 0.917070746421814 experiment 0.755138712452132 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037057 chr15:80037069 . . 0 33 hm5C_associated_SNPs_11006 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037058 + 80037038 80037078 41 AGAGGTCCCCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAG AGAGGTCCCCGGTTCAAATCCGGGTGCCCCCAGCCTGAAAG < 41bp 1 0.692648707551657 1 0.888103008270264 experiment 0.614702584896686 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037058 chr15:80037069 . . 0 32 hm5C_associated_SNPs_11007 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037066 + 80037046 80037086 41 CCGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTA CCGGTTCAAATCCGGGTGCCCCCAGCCTGAAAGTTTTCTTA < 41bp 1 0.125191464763137 1 0.0704418122768402 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037066 chr15:80037069 . . 0 24 hm5C_associated_SNPs_11008 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037067 + 80037047 80037087 41 CGGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTAC CGGTTCAAATCCGGGTGCCCCCAGCCTGAAAGTTTTCTTAC < 41bp 1 0.164614130853629 1 0.145288735628128 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037067 chr15:80037069 . . 0 23 hm5C_associated_SNPs_11009 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80037069 80037069 1 + T A rs574584834 80037068 + 80037048 80037088 41 GGTTCAAATCCGGGTGCCCCCTGCCTGAAAGTTTTCTTACT GGTTCAAATCCGGGTGCCCCCAGCCTGAAAGTTTTCTTACT < 41bp 1 0.361556486094924 1 0.32694798707962 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target KIAA1024;MTHFS ENSG00000260674;ENSG00000213527 intergenic Human other chr15:80037068 chr15:80037069 . . 0 22 hm5C_associated_SNPs_11010 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:80037037-80037081
64251 chr15 80430236 80430236 1 + C T rs556016603 80430256 + 80430236 80430276 41 CGTGCAGAAATTTTGGAGGGCTGTGATTTTTCCAGTATTAA TGTGCAGAAATTTTGGAGGGCTGTGATTTTTCCAGTATTAA < 41bp 1 0.251305646217977 1 0.0423670411109924 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND6 ENSG00000086666 UTR3 Human protein_coding chr15:80430256 chr15:80430236 . . 0 1 hm5C_associated_SNPs_11011 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr15:80430041-80430426
64251 chr15 80450501 80450501 1 + G T rs151264725 80450510 + 80450490 80450530 41 AACACCAGGATGTCTTCAATCAGGTAGGACATTGTGAAACG AACACCAGGATTTCTTCAATCAGGTAGGACATTGTGAAACG < 41bp 1 0.633385299761259 1 0.822506070137024 experiment 0.733229400477482 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAH ENSG00000103876 CDS Human protein_coding chr15:80450510 chr15:80450501 nonsynonymous SNV 0.989 5 12 hm5C_associated_SNPs_11012 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:80450470-80450504
64251 chr15 81221492 81221492 1 + C T rs35092028 81221501 + 81221481 81221521 41 TTGGACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGT TTGGACCATAGTGGAAGGACCCTCCCTATAGGCCAGTAGGT < 41bp 1 0.0125305692092677 1 0.0263857245445251 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221501 chr15:81221492 synonymous SNV . 0 12 hm5C_associated_SNPs_11016 0 0 2 PPIG POSTAR2 ENCODE chr15:81221446-81221495
64251 chr15 81221492 81221492 1 + C T rs35092028 81221505 + 81221485 81221525 41 ACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC ACCATAGTGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC < 41bp 1 0.0333854889273597 1 0.382892847061157 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221505 chr15:81221492 synonymous SNV . 0 8 hm5C_associated_SNPs_11017 0 0 2 PPIG POSTAR2 ENCODE chr15:81221446-81221495
64251 chr15 81221512 81221512 1 + G A rs113116775 81221501 + 81221481 81221521 41 TTGGACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGT TTGGACCATAGCGGAAGGACCCTCCCTATAGACCAGTAGGT < 41bp 1 0.0145500754634428 1 0.0312937200069427 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221501 chr15:81221512 nonsynonymous SNV 0.996 1 32 hm5C_associated_SNPs_11018 0 0 2 PRPF8 POSTAR2 ENCODE chr15:81221509-81221545
64251 chr15 81221512 81221512 1 + G A rs113116775 81221505 + 81221485 81221525 41 ACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC ACCATAGCGGAAGGACCCTCCCTATAGACCAGTAGGTTTGC < 41bp 1 0.0254611464772965 1 0.565735101699829 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221505 chr15:81221512 nonsynonymous SNV 0.996 1 28 hm5C_associated_SNPs_11019 0 0 2 PRPF8 POSTAR2 ENCODE chr15:81221509-81221545
64251 chr15 81294344 81294344 1 + C T rs112982370 81294357 + 81294337 81294377 41 CTGCAAGCCCTCTAGGAGGCCGAAAGCTGCAGCCCCTCCCC CTGCAAGTCCTCTAGGAGGCCGAAAGCTGCAGCCCCTCCCC < 41bp 1 0.660788626699722 1 0.813725352287292 experiment 0.678422746600555 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81294357 chr15:81294344 . . 0 8 hm5C_associated_SNPs_11020 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:81294340-81294360
64251 chr15 81294354 81294354 1 + G A rs114310271 81294357 + 81294337 81294377 41 CTGCAAGCCCTCTAGGAGGCCGAAAGCTGCAGCCCCTCCCC CTGCAAGCCCTCTAGGAAGCCGAAAGCTGCAGCCCCTCCCC < 41bp 1 0.680460477752819 1 0.864837169647217 experiment 0.639079044494362 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81294357 chr15:81294354 . . 0 18 hm5C_associated_SNPs_11021 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:81294340-81294360
64251 chr15 85348168 85348168 1 + C T rs12440418 85348175 + 85348155 85348195 41 CCGAGAGGTTAAACGATGTGCAGAGGCTACCTGTAGTGATG CCGAGAGGTTAAATGATGTGCAGAGGCTACCTGTAGTGATG < 41bp 1 0.639568277328364 1 0.525286197662354 experiment 0.720863445343271 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF592 ENSG00000166716 UTR3 Human protein_coding chr15:85348175 chr15:85348168 . . 0 14 hm5C_associated_SNPs_11028 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr15:85348134-85348175
64251 chr15 85348172 85348172 1 + G A rs1719 85348175 + 85348155 85348195 41 CCGAGAGGTTAAACGATGTGCAGAGGCTACCTGTAGTGATG CCGAGAGGTTAAACGATATGCAGAGGCTACCTGTAGTGATG < 41bp 1 0.719629963310826 1 0.547822713851929 experiment 0.560740073378349 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF592 ENSG00000166716 UTR3 Human protein_coding chr15:85348175 chr15:85348172 . . 0 18 hm5C_associated_SNPs_11029 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr15:85348134-85348175
64251 chr15 85923943 85923943 1 + G C rs571229939 85923949 + 85923929 85923969 41 TTTAGCCGCCTCCGGGGGAGCGGCCGCCTATTGTCTTTCTC TTTAGCCGCCTCCGCGGGAGCGGCCGCCTATTGTCTTTCTC < 41bp 1 0.34627750296263 1 0.362250208854675 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP13 ENSG00000170776 UTR5 Human protein_coding chr15:85923949 chr15:85923943 . . 0 15 hm5C_associated_SNPs_11030 0 0 4 NCBP2 POSTAR2 ENCODE chr15:85923885-85923956
64251 chr15 86288456 86288456 1 + G T rs115161786 86288442 + 86288422 86288462 41 GCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACC GCCTGGACGGACCCGGAGCCCCCGCATATCAGCATTTCACC < 41bp 1 0.208986345093375 1 0.0772379040718079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP13 ENSG00000259407 ncRNA_intronic Human antisense chr15:86288442 chr15:86288456 . . 0 35 hm5C_associated_SNPs_11031 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:86288420-86288519
64251 chr15 86292114 86292114 1 + C G rs13225 86292098 + 86292078 86292118 41 GGAGGGGCTTCTGCAGGAAGCACTCACCCCCCACACCTTCC GGAGGGGCTTCTGCAGGAAGCACTCACCCCCCACACGTTCC < 41bp 1 0.273566200690274 1 0.0841392278671265 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP13 ENSG00000259407 ncRNA_intronic Human antisense chr15:86292098 chr15:86292114 . . 0 37 hm5C_associated_SNPs_11033 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:86292097-86292153
64251 chr15 89015930 89015930 1 + T C rs9920196 89015924 + 89015904 89015944 41 GGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAGC GGAAAGAAATTTGAGGAGATCCCAATCGCACACATTAAAGC < 41bp 1 0.470050551151895 1 0.220110327005386 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89015924 chr15:89015930 synonymous SNV . 0 27 hm5C_associated_SNPs_11034 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:89015913-89015937
64251 chr15 89169653 89169653 1 + G A rs34649587 89169639 + 89169619 89169659 41 GGTCCTCCCCACTGCCCACCCCTTTCGGGGCAGCGACAGCA GGTCCTCCCCACTGCCCACCCCTTTCGGGGCAGCAACAGCA < 41bp 1 0.0385932328241099 1 0.071577250957489 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89169639 chr15:89169653 synonymous SNV . 0 35 hm5C_associated_SNPs_11035 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:89169640-89169660
64251 chr15 89169858 89169858 1 + A G rs8027765 89169857 + 89169837 89169877 41 TCCATTGTGAGCTACCATGGCAATGTCCTCTATGACAAGTA TCCATTGTGAGCTACCATGGCGATGTCCTCTATGACAAGTA < 41bp 1 0.287761423044934 1 0.399381220340729 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89169857 chr15:89169858 nonsynonymous SNV 0.658 0 22 hm5C_associated_SNPs_11036 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr15:89169840-89169880
64251 chr15 89174100 89174100 1 + C G rs73465625 89174107 + 89174087 89174127 41 TTCTTCCCCACCTCCCTGACCTGGAACTCTGGCTACAGCCA TTCTTCCCCACCTGCCTGACCTGGAACTCTGGCTACAGCCA < 41bp 1 0.781818590008632 1 0.32287922501564 experiment 0.436362819982737 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AEN ENSG00000181026 UTR3 Human protein_coding chr15:89174107 chr15:89174100 . . 0 14 hm5C_associated_SNPs_11037 0 0 22 FUS POSTAR2 DRA001158,DRS012384 chr15:89174053-89174111
64251 chr15 89740295 89740295 1 + T C rs188662948 89740302 + 89740282 89740322 41 CAAAGGAGCCACCTGGGCGCCTGAGTGCCAACCCTCAGGGC CAAAGGAGCCACCCGGGCGCCTGAGTGCCAACCCTCAGGGC < 41bp 1 0.598441943878209 1 0.603996872901917 experiment 0.803116112243581 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABHD2 ENSG00000140526 UTR3 Human protein_coding chr15:89740302 chr15:89740295 . . 0 14 hm5C_associated_SNPs_11038 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:89740259-89740307
64251 chr15 89835982 89835982 1 + C A rs28378332 89835978 + 89835958 89835998 41 TATAAGAATACAGTCATACCCTTACAGCAGGGAGAGGAGGA TATAAGAATACAGTCATACCCTTAAAGCAGGGAGAGGAGGA < 41bp 1 0.438281396881712 1 0.190776169300079 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FANCI ENSG00000140525 CDS Human protein_coding chr15:89835978 chr15:89835982 nonsynonymous SNV 0.347 0 25 hm5C_associated_SNPs_11039 1 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:89835980-89836000
64251 chr15 89859740 89859740 1 + C T rs574349233 89859726 + 89859706 89859746 41 TAATGTGAACTTTGGGGCTTCTGCTTCATTTTTACCCAACA TAATGTGAACTTTGGGGCTTCTGCTTCATTTTTATCCAACA < 41bp 1 0.283480376034581 1 0.26396831870079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FANCI;POLG ENSG00000140521;ENSG00000140525 UTR3 Human other chr15:89859726 chr15:89859740 . . 0 35 hm5C_associated_SNPs_11040 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:89859676-89859812
64251 chr15 90159640 90159640 1 + T C rs187740323 90159641 + 90159621 90159661 41 GTGTTTACATTTTAGGTTATCACAAACTGCTGACTAAGAGT GTGTTTACATTTTAGGTTACCACAAACTGCTGACTAAGAGT < 41bp 1 0.261008797464182 1 0.447344958782196 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90159641 chr15:90159640 synonymous SNV . 0 20 hm5C_associated_SNPs_11041 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:90159636-90159658
64251 chr15 90771680 90771680 1 + C T rs200648029 90771692 + 90771672 90771712 41 CCACTCAACGGCCTAGGGCCCCCTAGCACCCCGCTCGATCA CCACTCAATGGCCTAGGGCCCCCTAGCACCCCGCTCGATCA < 41bp 1 0.259620127376047 1 0.101760357618332 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771692 chr15:90771680 synonymous SNV . 0 9 hm5C_associated_SNPs_11044 0 0 1 RPS3 POSTAR2 ENCODE chr15:90771632-90771689
64251 chr15 90814664 90814664 1 + C G rs11073922 90814684 + 90814664 90814704 41 CTTATGCCAGGGCATGAAGCCTCATCTAAAGACCCAAATCA GTTATGCCAGGGCATGAAGCCTCATCTAAAGACCCAAATCA < 41bp 1 0.413876496424287 1 0.463406205177307 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NGRN ENSG00000182768 CDS Human protein_coding chr15:90814684 chr15:90814664 nonsynonymous SNV 0.017 1 1 hm5C_associated_SNPs_11046 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:90814650-90814679
64251 chr15 90931486 90931486 1 + C A rs550262812 90931505 + 90931485 90931525 41 GCCCGCGCACTTGGCAGGAGCTGTAGCTACCGCCGTCCGCG GACCGCGCACTTGGCAGGAGCTGTAGCTACCGCCGTCCGCG < 41bp 1 0.678235476499219 1 0.374939024448395 experiment 0.643529047001561 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IQGAP1 ENSG00000140575 UTR5 Human protein_coding chr15:90931505 chr15:90931486 . . 0 2 hm5C_associated_SNPs_11047 0 0 3 FMR1 POSTAR2 ENCODE chr15:90931481-90931543
64251 chr15 90931497 90931497 1 + G A rs535666736 90931505 + 90931485 90931525 41 GCCCGCGCACTTGGCAGGAGCTGTAGCTACCGCCGTCCGCG GCCCGCGCACTTAGCAGGAGCTGTAGCTACCGCCGTCCGCG < 41bp 1 0.632679578800878 1 0.369190692901611 experiment 0.734640842398244 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IQGAP1 ENSG00000140575 UTR5 Human protein_coding chr15:90931505 chr15:90931497 . . 0 13 hm5C_associated_SNPs_11048 0 0 3 FMR1 POSTAR2 ENCODE chr15:90931481-90931543
64251 chr15 91035827 91035827 1 + G A rs112274735 91035817 + 91035797 91035837 41 GTACCGACAGAGGAGAAAGGCCGAACTAGTGAAACTGCAAC GTACCGACAGAGGAGAAAGGCCGAACTAGTAAAACTGCAAC < 41bp 1 0.335722795640352 1 0.362477362155914 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91035817 chr15:91035827 synonymous SNV . 0 31 hm5C_associated_SNPs_11049 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91035818-91035854
64251 chr15 91045408 91045408 1 + G A rs3540 91045405 + 91045385 91045425 41 CCTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCAC CCTCCCAAGAGTTTGGACTGCCCATCAGATTGTTGCTGCAC < 41bp 1 0.233937860113884 1 0.0897901058197021 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045405 chr15:91045408 . . 0 24 hm5C_associated_SNPs_11050 0 1 18 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr15:91045380-91045408
64251 chr15 91045408 91045408 1 + G A rs3540 91045406 + 91045386 91045426 41 CTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACA CTCCCAAGAGTTTGGACTGCCCATCAGATTGTTGCTGCACA < 41bp 1 0.10658289234369 1 0.0908144116401672 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045406 chr15:91045408 . . 0 23 hm5C_associated_SNPs_11051 0 1 18 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr15:91045380-91045408
64251 chr15 91045408 91045408 1 + G A rs3540 91045407 + 91045387 91045427 41 TCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACAT TCCCAAGAGTTTGGACTGCCCATCAGATTGTTGCTGCACAT < 41bp 1 0.627946418401032 1 0.130007594823837 experiment 0.744107163197937 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045407 chr15:91045408 . . 0 22 hm5C_associated_SNPs_11052 0 1 18 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr15:91045380-91045408
64251 chr15 91045419 91045419 1 + G T rs3539 91045405 + 91045385 91045425 41 CCTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCAC CCTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTTCTGCAC < 41bp 1 0.435890789408962 1 0.0739047527313232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045405 chr15:91045419 . . 0 35 hm5C_associated_SNPs_11053 0 0 14 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:91045403-91045424
64251 chr15 91045419 91045419 1 + G T rs3539 91045406 + 91045386 91045426 41 CTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACA CTCCCAAGAGTTTGGACTGCCCGTCAGATTGTTTCTGCACA < 41bp 1 0.152128286997693 1 0.039366751909256 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045406 chr15:91045419 . . 0 34 hm5C_associated_SNPs_11054 0 0 14 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:91045403-91045424
64251 chr15 91045419 91045419 1 + G T rs3539 91045407 + 91045387 91045427 41 TCCCAAGAGTTTGGACTGCCCGTCAGATTGTTGCTGCACAT TCCCAAGAGTTTGGACTGCCCGTCAGATTGTTTCTGCACAT < 41bp 1 0.652652309256973 1 0.102839171886444 experiment 0.694695381486054 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 UTR3 Human protein_coding chr15:91045407 chr15:91045419 . . 0 33 hm5C_associated_SNPs_11055 0 0 14 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:91045403-91045424
64251 chr15 91187750 91187750 1 + A C rs77057982 91187758 + 91187738 91187778 41 CCTACTGCCCCAAAGGCGTTCTCCAGGTGACTTGTGAAAAC CCTACTGCCCCACAGGCGTTCTCCAGGTGACTTGTGAAAAC < 41bp 1 0.687489456950709 1 0.875777304172516 experiment 0.625021086098583 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91187758 chr15:91187750 . . 0 13 hm5C_associated_SNPs_11058 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:91187728-91187766
64251 chr15 91424649 91424649 1 + C A rs543689016 91424655 + 91424635 91424675 41 GCCAGCGTCTGCGCCCCCTGCCACGCCTCATGTGCCACATG GCCAGCGTCTGCGCACCCTGCCACGCCTCATGTGCCACATG < 41bp 1 0.161882309662667 1 0.159842699766159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FURIN ENSG00000140564 CDS Human protein_coding chr15:91424655 chr15:91424649 synonymous SNV . 0 15 hm5C_associated_SNPs_11059 0 0 3 RBM15 POSTAR2 ENCODE chr15:91424649-91424731
64251 chr15 91425232 91425232 1 + C T rs6227 91425252 + 91425232 91425272 41 CTTCCCATCCTACCCTCGGGCCCACCTGGCCACCTGAGGTG TTTCCCATCCTACCCTCGGGCCCACCTGGCCACCTGAGGTG < 41bp 1 0.0852843963589985 1 0.0298113524913788 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FURIN ENSG00000140564 UTR3 Human protein_coding chr15:91425252 chr15:91425232 . . 0 1 hm5C_associated_SNPs_11060 0 0 22 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:91425212-91425259
64251 chr15 91448684 91448684 1 + C G rs143801767 91448697 + 91448677 91448717 41 CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG CCATCTCGCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG < 41bp 1 0.302359985808757 1 0.242849111557007 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91448697 chr15:91448684 synonymous SNV . 0 8 hm5C_associated_SNPs_11061 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91448672-91448687
64251 chr15 91478544 91478544 1 + A C rs17635974 91478525 + 91478505 91478545 41 GCCCCGCCCCAGAGACTGCGCCTGCGCGGGCACGAGACAAC GCCCCGCCCCAGAGACTGCGCCTGCGCGGGCACGAGACACC < 41bp 1 0.383238440033824 1 0.130779802799225 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UNC45A ENSG00000140553 UTR5 Human protein_coding chr15:91478525 chr15:91478544 . . 0 40 hm5C_associated_SNPs_11067 0 0 1 DDX3X POSTAR2 ENCODE chr15:91478516-91478599
64251 chr15 91503684 91503684 1 + C G rs61742976 91503678 + 91503658 91503698 41 ACTGGATCTCCCCATGGGCTCAGATGCAGTCAAGGCCAGCT ACTGGATCTCCCCATGGGCTCAGATGGAGTCAAGGCCAGCT < 41bp 1 0.520422714857089 1 0.470725238323212 experiment 0.959154570285822 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91503678 chr15:91503684 nonsynonymous SNV 0.700 2 27 hm5C_associated_SNPs_11068 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:91503662-91503686
64251 chr15 93482864 93482864 1 + A G rs117844037 93482846 + 93482826 93482866 41 TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAA TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAGAA < 41bp 1 0.357797454336083 1 0.496338993310928 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482846 chr15:93482864 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_11069 2 0 12 NOP58 POSTAR2 GSE43666,GSM1067861 chr15:93482838-93482899
64251 chr15 93482864 93482864 1 + A G rs117844037 93482848 + 93482828 93482868 41 TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAAAG TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAGAAAG < 41bp 1 0.570931754251093 1 0.807113170623779 experiment 0.858136491497813 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482848 chr15:93482864 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_11070 2 0 12 NOP58 POSTAR2 GSE43666,GSM1067861 chr15:93482838-93482899
64251 chr15 93570908 93570908 1 + C T rs139506973 93570914 + 93570894 93570934 41 CAGCAGCCCAGGCCCAGCACCAGCGGTCTTCCGGCTCCTCT CAGCAGCCCAGGCCTAGCACCAGCGGTCTTCCGGCTCCTCT < 41bp 1 0.760517197459772 1 0.76434862613678 experiment 0.478965605080456 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHD2 ENSG00000173575 UTR3 Human protein_coding chr15:93570914 chr15:93570908 . . 0 15 hm5C_associated_SNPs_11071 0 0 2 DDX55 POSTAR2 ENCODE chr15:93570860-93570911
64251 chr15 93570997 93570997 1 + T C rs58542701 93571016 + 93570996 93571036 41 GTGCCCCACTCATCTGGGGACAGATGGTTTTTCTTTATTGT GCGCCCCACTCATCTGGGGACAGATGGTTTTTCTTTATTGT < 41bp 1 0.1641630797754 1 0.421973764896393 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CHD2 ENSG00000173575 UTR3 Human protein_coding chr15:93571016 chr15:93570997 . . 0 2 hm5C_associated_SNPs_11072 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:93570968-93571006
64251 chr15 93571021 93571021 1 + G A rs184443272 93571016 + 93570996 93571036 41 GTGCCCCACTCATCTGGGGACAGATGGTTTTTCTTTATTGT GTGCCCCACTCATCTGGGGACAGATAGTTTTTCTTTATTGT < 41bp 1 0.126702182369043 1 0.320834308862686 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CHD2 ENSG00000173575 UTR3 Human protein_coding chr15:93571016 chr15:93571021 . . 0 26 hm5C_associated_SNPs_11073 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:93570984-93571029
64251 chr15 95022955 95022955 1 + G C rs578107796 95022962 + 95022942 95022982 41 TCACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTTGCC TCACTTGAAAAATCAGGGTCCCATGAAAGTATTTGGTTGCC < 41bp 1 0.0606743811616 1 0.123087733983994 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCTP2 ENSG00000140563 UTR3 Human protein_coding chr15:95022962 chr15:95022955 . . 0 14 hm5C_associated_SNPs_11078 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:95022949-95022985
64251 chr15 96875667 96875667 1 + G A rs199765586 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGCGCAGCGTGCGGAGGAACCTAAGCTACACGTGCCGCGC < 41bp 1 0.323241139505855 1 0.172720164060593 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875667 synonymous SNV . 0 24 hm5C_associated_SNPs_11079 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:96875643-96875673
64251 chr15 99673019 99673019 1 + C G rs139332546 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGGTGTGTGTGACCGTGGTTCCTGGAGAGACGC < 41bp 1 0.247120948041463 1 0.102363228797913 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673019 nonsynonymous SNV 0.049 2 17 hm5C_associated_SNPs_11086 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99673013-99673032
64251 chr15 99791695 99791695 1 + T C rs3743238 99791692 + 99791672 99791712 41 CCGCCCCGCCCGCCGTCCCCCGCTTGGCTTCCAGCGCCGCT CCGCCCCGCCCGCCGTCCCCCGCCTGGCTTCCAGCGCCGCT < 41bp 1 0.699534833011643 1 0.129376530647278 experiment 0.600930333976714 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRRC28 ENSG00000168904 UTR5 Human protein_coding chr15:99791692 chr15:99791695 . . 0 24 hm5C_associated_SNPs_11094 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:99791694-99791695
64251 chr15 99797972 99797972 1 + A G rs550088130 99797953 + 99797933 99797973 41 AGGATCTGGGTAAAAGTAGACAAGGCTCAAGGATGGATGAT AGGATCTGGGTAAAAGTAGACAAGGCTCAAGGATGGATGGT < 41bp 1 0.378556995409988 1 0.732501983642578 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSP90B2P ENSG00000259706 ncRNA_exonic Human processed_pseudogene chr15:99797953 chr15:99797972 . . 0 40 hm5C_associated_SNPs_11096 0 0 30 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:99797955-99797976
64251 chr15 100106195 100106195 1 + G C rs547797211 100106206 + 100106186 100106226 41 GGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGGCTGAAA GGGATCCGTCCGCGGATGTCCCGGCGAGTCCCGGGCTGAAA < 41bp 1 0.586708916882923 1 0.836250424385071 experiment 0.826582166234154 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106206 chr15:100106195 . . 0 10 hm5C_associated_SNPs_11097 0 0 2 DDX3X POSTAR2 ENCODE chr15:100106183-100106249
64251 chr15 100106199 100106199 1 + G C rs535240545 100106206 + 100106186 100106226 41 GGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGGCTGAAA GGGATCCGTGCGCCGATGTCCCGGCGAGTCCCGGGCTGAAA < 41bp 1 0.590071151681478 1 0.900911331176758 experiment 0.819857696637045 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106206 chr15:100106199 . . 0 14 hm5C_associated_SNPs_11098 0 0 2 DDX3X POSTAR2 ENCODE chr15:100106183-100106249
64251 chr15 100106208 100106208 1 + G A rs553595669 100106206 + 100106186 100106226 41 GGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGGCTGAAA GGGATCCGTGCGCGGATGTCCCAGCGAGTCCCGGGCTGAAA < 41bp 1 0.460350344235114 1 0.396528035402298 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106206 chr15:100106208 . . 0 23 hm5C_associated_SNPs_11099 0 0 2 DDX3X POSTAR2 ENCODE chr15:100106183-100106249
64251 chr15 100106220 100106220 1 + G A rs575258085 100106206 + 100106186 100106226 41 GGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGGCTGAAA GGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGACTGAAA < 41bp 1 0.590911025742828 1 0.783976674079895 experiment 0.818177948514345 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106206 chr15:100106220 . . 0 35 hm5C_associated_SNPs_11100 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:100106220-100106240
64251 chr15 101169694 101169694 1 + A G rs61752833 101169701 + 101169681 101169721 41 CTCTTCACTATGCAGCCATGCATGGCCGGGCCCGCATTGCA CTCTTCACTATGCGGCCATGCATGGCCGGGCCCGCATTGCA < 41bp 1 0.462509259758373 1 0.0504675805568695 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169701 chr15:101169694 synonymous SNV . 0 14 hm5C_associated_SNPs_11101 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:101169659-101169699
64251 chr16 107162 107162 1 + C G rs10266 107163 + 107143 107183 41 AGCCTCCAGACAGGACAACCCTCTTCATCACTGGTGGCTGA AGCCTCCAGACAGGACAACGCTCTTCATCACTGGTGGCTGA < 41bp 1 0.395314595047226 1 0.0434209406375885 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNRNP25 ENSG00000161981 UTR3 Human protein_coding chr16:107163 chr16:107162 . . 0 20 hm5C_associated_SNPs_11107 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:107105-107200
64251 chr16 133280 133280 1 + G A rs2266608 133261 + 133241 133281 41 ACATCTCCAGCCAGGGTGAGCAGTGCTGGGGCACGGGGGGT ACATCTCCAGCCAGGGTGAGCAGTGCTGGGGCACGGGGGAT < 41bp 1 0.28506617193806 1 0.350021839141846 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MPG ENSG00000103152 intronic Human protein_coding chr16:133261 chr16:133280 . . 0 40 hm5C_associated_SNPs_11108 0 0 7 BUD13 POSTAR2 ENCODE chr16:133257-133326
64251 chr16 309998 309998 1 + C T rs78001048 309995 + 309975 310015 41 CTCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG CTCTCCCTGCACCTTTGCAGCTGTTGTGTCGGGGGCCAACG < 41bp 1 0.351628464761484 1 0.0204946100711823 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:309995 chr16:309998 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_11109 0 0 2 DDX55 POSTAR2 ENCODE chr16:309979-310039
64251 chr16 310005 310005 1 + G A rs13335497 309995 + 309975 310015 41 CTCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG CTCTCCCTGCACCTTTGCAGCTGCTGTGTCAGGGGCCAACG < 41bp 1 0.602454296230401 1 0.0297152101993561 experiment 0.795091407539199 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:309995 chr16:310005 synonymous SNV . 0 31 hm5C_associated_SNPs_11110 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:310002-310029
64251 chr16 449399 449399 1 + C T rs148144911 449415 + 449395 449435 41 TTGCCGAGCACTACCAGGACCTGCGGAGGAAGCCCTTCTAC TTGCTGAGCACTACCAGGACCTGCGGAGGAAGCCCTTCTAC < 41bp 1 0.731786731156185 1 0.350460320711136 experiment 0.536426537687629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NME4 ENSG00000103202 CDS Human protein_coding chr16:449415 chr16:449399 synonymous SNV . 0 5 hm5C_associated_SNPs_11111 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:449380-449400
64251 chr16 457007 457007 1 + T C rs141804536 457019 + 456999 457039 41 TATTGGGTTCTGGGAGGGACCTTCCTGTTTGGGGGTAATGT TATTGGGTCCTGGGAGGGACCTTCCTGTTTGGGGGTAATGT < 41bp 1 0.020426249497427 1 0.0797382295131683 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DECR2 ENSG00000103202;ENSG00000242612 intronic Human other chr16:457019 chr16:457007 . . 0 9 hm5C_associated_SNPs_11112 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr16:457000-457020
64251 chr16 457027 457027 1 + T C rs113274541 457019 + 456999 457039 41 TATTGGGTTCTGGGAGGGACCTTCCTGTTTGGGGGTAATGT TATTGGGTTCTGGGAGGGACCTTCCTGTCTGGGGGTAATGT < 41bp 1 0.0214210769404734 1 0.0376558899879456 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DECR2 ENSG00000103202;ENSG00000242612 intronic Human other chr16:457019 chr16:457027 . . 0 29 hm5C_associated_SNPs_11113 0 0 1 SF3B1 POSTAR2 ENCODE chr16:457021-457062
64251 chr16 460299 460299 1 + A T rs542989271 460313 + 460293 460333 41 TTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAA TTCAAGTCCGTGATGGACATCGATACCAGCGGCACCTTCAA < 41bp 1 0.471528651241555 1 0.434303343296051 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DECR2 ENSG00000242612 CDS Human protein_coding chr16:460313 chr16:460299 nonsynonymous SNV 0.991 2 7 hm5C_associated_SNPs_11114 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr16:460299-460300
64251 chr16 460321 460321 1 + G A rs77446963 460313 + 460293 460333 41 TTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAA TTCAAGACCGTGATGGACATCGATACCAACGGCACCTTCAA < 41bp 1 0.524449327845475 1 0.468924969434738 experiment 0.951101344309051 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DECR2 ENSG00000242612 CDS Human protein_coding chr16:460313 chr16:460321 nonsynonymous SNV 0.002 0 29 hm5C_associated_SNPs_11115 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:460302-460324
64251 chr16 462280 462280 1 + G A rs76469232 462271 + 462251 462291 41 TGAAAACACTGAGGTGCTCCCATCTGTGCGTGGCCCATGAG TGAAAACACTGAGGTGCTCCCATCTGTGCATGGCCCATGAG < 41bp 1 0.399508899643502 1 0.222327083349228 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DECR2 ENSG00000242612 UTR3 Human protein_coding chr16:462271 chr16:462280 . . 0 30 hm5C_associated_SNPs_11116 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:462263-462299
64251 chr16 462285 462285 1 + C T rs142570754 462271 + 462251 462291 41 TGAAAACACTGAGGTGCTCCCATCTGTGCGTGGCCCATGAG TGAAAACACTGAGGTGCTCCCATCTGTGCGTGGCTCATGAG < 41bp 1 0.40364368897247 1 0.219246238470078 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DECR2 ENSG00000242612 UTR3 Human protein_coding chr16:462271 chr16:462285 . . 0 35 hm5C_associated_SNPs_11117 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:462263-462299
64251 chr16 560734 560734 1 + G A rs141366917 560728 + 560708 560748 41 CGAGATGGTCCTGGAAGAGACCCGGCGTCAGAAGGAGCTCC CGAGATGGTCCTGGAAGAGACCCGGCATCAGAAGGAGCTCC < 41bp 1 0.350299027953151 1 0.0981593132019043 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:560728 chr16:560734 nonsynonymous SNV 0.022 2 27 hm5C_associated_SNPs_11118 0 0 6 GRWD1 POSTAR2 ENCODE chr16:560731-560813
64251 chr16 560734 560734 1 + G A rs141366917 560733 + 560713 560753 41 TGGTCCTGGAAGAGACCCGGCGTCAGAAGGAGCTCCTGTGC TGGTCCTGGAAGAGACCCGGCATCAGAAGGAGCTCCTGTGC < 41bp 1 0.282650027238687 1 0.046173483133316 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:560733 chr16:560734 nonsynonymous SNV 0.022 2 22 hm5C_associated_SNPs_11119 0 0 6 GRWD1 POSTAR2 ENCODE chr16:560731-560813
64251 chr16 560734 560734 1 + G A rs141366917 560748 + 560728 560768 41 CCCGGCGTCAGAAGGAGCTCCTGTGCAAGATGGAGAGGGAG CCCGGCATCAGAAGGAGCTCCTGTGCAAGATGGAGAGGGAG < 41bp 1 0.150794746586752 1 0.556317746639252 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:560748 chr16:560734 nonsynonymous SNV 0.022 2 7 hm5C_associated_SNPs_11120 0 0 6 GRWD1 POSTAR2 ENCODE chr16:560731-560813
64251 chr16 601533 601533 1 + G A rs141298471 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACCCATGGGGCCGTTTCTCCTGGAACGGCAGC < 41bp 1 0.020693440298385 1 0.0475730001926422 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601533 synonymous SNV . 0 14 hm5C_associated_SNPs_11122 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr16 601533 601533 1 + G A rs141298471 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACCCATGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG < 41bp 1 0.492619634217184 1 0.865805149078369 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601533 synonymous SNV . 0 7 hm5C_associated_SNPs_11123 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr16 601554 601554 1 + C G rs377258156 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAAGGGCAGC < 41bp 1 0.0248519707317337 1 0.0511763393878937 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601554 nonsynonymous SNV 0.981 3 35 hm5C_associated_SNPs_11124 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr16 601554 601554 1 + C G rs377258156 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACCCGTGGGGCCGTTTCTCCTGGAAGGGCAGCTGGTCCG < 41bp 1 0.489545926309877 1 0.864394009113312 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601554 nonsynonymous SNV 0.981 3 28 hm5C_associated_SNPs_11125 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr16 632011 632011 1 + C T rs74872027 632031 + 632011 632051 41 CTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCT TTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCT < 41bp 1 0.548848259080683 1 0.617541790008545 experiment 0.902303481838634 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PIGQ ENSG00000007541 intronic Human protein_coding chr16:632031 chr16:632011 . . 0 1 hm5C_associated_SNPs_11127 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:631984-632027
64251 chr16 632051 632051 1 + T C rs2018789 632031 + 632011 632051 41 CTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCT CTCCCAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCC < 41bp 1 0.59714126848091 1 0.649334788322449 experiment 0.80571746303818 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PIGQ ENSG00000007541 intronic Human protein_coding chr16:632031 chr16:632051 . . 0 41 hm5C_associated_SNPs_11128 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:632031-632065
64251 chr16 632051 632051 1 + T C rs2018789 632035 + 632015 632055 41 CAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCTGGCT CAAAATGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCT < 41bp 1 0.290415499947671 1 0.423501759767532 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PIGQ ENSG00000007541 intronic Human protein_coding chr16:632035 chr16:632051 . . 0 37 hm5C_associated_SNPs_11129 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:632031-632065
64251 chr16 632051 632051 1 + T C rs2018789 632041 + 632021 632061 41 GCTGGGATTACAGGCGTGAGCCACCGTGCCTGGCTGCAGGA GCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCTGCAGGA < 41bp 1 0.121178333341402 1 0.172724962234497 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PIGQ ENSG00000007541 intronic Human protein_coding chr16:632041 chr16:632051 . . 0 31 hm5C_associated_SNPs_11130 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:632031-632065
64251 chr16 633722 633722 1 + C T rs563798371 633706 + 633686 633726 41 CAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCCGTAC CAGCCTCAGTGTCAAGGGCCCGCCCACTGACCCAGCTGTAC < 41bp 1 0.30319393198637 1 0.0469253063201904 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGQ ENSG00000007541 UTR3 Human protein_coding chr16:633706 chr16:633722 . . 0 37 hm5C_associated_SNPs_11131 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:633720-633740
64251 chr16 675985 675985 1 + G A rs149195145 675974 + 675954 675994 41 AGCGGCAGGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAG AGCGGCAGGTCCCGACGGAGCAGGCCCGCGCATACGCAGAG < 41bp 1 0.551877190187569 1 0.710542023181915 experiment 0.896245619624861 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C ENSG00000197562 CDS Human protein_coding chr16:675974 chr16:675985 synonymous SNV . 0 32 hm5C_associated_SNPs_11132 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr16:675985-675986
64251 chr16 691917 691917 1 + A C rs139969449 691910 + 691890 691930 41 GGCCCGCCCCCTCCCCGCGGCGCCCGCAGTCCGTTAAGTGC GGCCCGCCCCCTCCCCGCGGCGCCCGCCGTCCGTTAAGTGC < 41bp 1 0.280682427463215 1 0.105451613664627 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCRIP2 ENSG00000172366 UTR5 Human protein_coding chr16:691910 chr16:691917 . . 0 28 hm5C_associated_SNPs_11133 0 0 2 DDX3X POSTAR2 ENCODE chr16:691913-692046
64251 chr16 691917 691917 1 + A C rs139969449 691913 + 691893 691933 41 CCGCCCCCTCCCCGCGGCGCCCGCAGTCCGTTAAGTGCGAG CCGCCCCCTCCCCGCGGCGCCCGCCGTCCGTTAAGTGCGAG < 41bp 1 0.209575853564815 1 0.34798538684845 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCRIP2 ENSG00000172366 UTR5 Human protein_coding chr16:691913 chr16:691917 . . 0 25 hm5C_associated_SNPs_11134 0 0 2 DDX3X POSTAR2 ENCODE chr16:691913-692046
64251 chr16 691917 691917 1 + A C rs139969449 691935 + 691915 691955 41 GCAGTCCGTTAAGTGCGAGCCCCGGCGCAGGGGCCGGATCT GCCGTCCGTTAAGTGCGAGCCCCGGCGCAGGGGCCGGATCT < 41bp 1 0.588891314736483 1 0.255284130573273 experiment 0.822217370527035 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 UTR5 Human protein_coding chr16:691935 chr16:691917 . . 0 3 hm5C_associated_SNPs_11135 0 0 2 DDX3X POSTAR2 ENCODE chr16:691913-692046
64251 chr16 697823 697823 1 + C T rs374043940 697817 + 697797 697837 41 CAACAGCAGCTGGATGGTGGCCCAGCCGGTGAGGGCGGGCC CAACAGCAGCTGGATGGTGGCCCAGCTGGTGAGGGCGGGCC < 41bp 1 0.253513259548715 1 0.169194400310516 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697817 chr16:697823 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_11136 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 697823 697823 1 + C T rs374043940 697818 + 697798 697838 41 AACAGCAGCTGGATGGTGGCCCAGCCGGTGAGGGCGGGCCA AACAGCAGCTGGATGGTGGCCCAGCTGGTGAGGGCGGGCCA < 41bp 1 0.249184556719358 1 0.328366458415985 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697818 chr16:697823 nonsynonymous SNV . 0 26 hm5C_associated_SNPs_11137 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 697823 697823 1 + C T rs374043940 697819 + 697799 697839 41 ACAGCAGCTGGATGGTGGCCCAGCCGGTGAGGGCGGGCCAA ACAGCAGCTGGATGGTGGCCCAGCTGGTGAGGGCGGGCCAA < 41bp 1 0.569718875395801 1 0.492022305727005 experiment 0.860562249208398 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697819 chr16:697823 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_11138 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 697823 697823 1 + C T rs374043940 697836 + 697816 697856 41 GCCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTG GCCCAGCTGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTG < 41bp 1 0.192365640496114 1 0.35424280166626 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697836 chr16:697823 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_11139 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 697823 697823 1 + C T rs374043940 697837 + 697817 697857 41 CCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTGG CCCAGCTGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTGG < 41bp 1 0.655645318898271 1 0.603377401828766 experiment 0.688709362203457 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697837 chr16:697823 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_11140 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 705360 705360 1 + T A rs3803697 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGAGCTGCGT < 41bp 1 0.442539917395817 1 0.410232573747635 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705360 nonsynonymous SNV 0.000 0 34 hm5C_associated_SNPs_11143 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:705360-705380
64251 chr16 705361 705361 1 + G A rs181867252 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTACTGCGT < 41bp 1 0.451034459905451 1 0.463468164205551 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705361 synonymous SNV . 0 35 hm5C_associated_SNPs_11144 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:705360-705380
64251 chr16 712775 712775 1 + G A rs181214791 712768 + 712748 712788 41 GGACATGGGCGTCGTGGGCACCACGGCGGGCACGCTGTGGT GGACATGGGCGTCGTGGGCACCACGGCAGGCACGCTGTGGT < 41bp 1 0.195559240517016 1 0.190983980894089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:712768 chr16:712775 synonymous SNV . 0 28 hm5C_associated_SNPs_11145 0 0 4 BUD13 POSTAR2 ENCODE chr16:712767-712851
64251 chr16 712780 712780 1 + C A rs576866547 712768 + 712748 712788 41 GGACATGGGCGTCGTGGGCACCACGGCGGGCACGCTGTGGT GGACATGGGCGTCGTGGGCACCACGGCGGGCAAGCTGTGGT < 41bp 1 0.191804393331218 1 0.199606359004974 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:712768 chr16:712780 nonsynonymous SNV 0.001 3 33 hm5C_associated_SNPs_11146 0 0 4 BUD13 POSTAR2 ENCODE chr16:712767-712851
64251 chr16 717566 717566 1 + G A rs201597639 717579 + 717559 717599 41 GATCCTTGTGTGGGAGGTCCCCGGCCTCTGAGATGCAGCAG GATCCTTATGTGGGAGGTCCCCGGCCTCTGAGATGCAGCAG < 41bp 1 0.478386409900246 1 0.681677043437958 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:717579 chr16:717566 nonsynonymous SNV 0.992 2 8 hm5C_associated_SNPs_11150 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:717549-717576
64251 chr16 722942 722942 1 + C T rs79058341 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACATGGATGGGCAGACCCCCTGCCTCTTTGTCTCCTC < 41bp 1 0.337943047533748 1 0.0842556059360504 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722942 synonymous SNV . 0 12 hm5C_associated_SNPs_11151 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr16 722958 722958 1 + C G rs55977091 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACATGGACGGGCAGACCCCCTGCGTCTTTGTCTCCTC < 41bp 1 0.393971270538546 1 0.174207389354706 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722958 nonsynonymous SNV 0.952 1 28 hm5C_associated_SNPs_11152 0 0 5 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr16 722997 722997 1 + G A rs61745203 723004 + 722984 723024 41 GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT GCCCGAAGGTGTCACGGTGTCTGGCCCATCACCGGCCGAGT < 41bp 1 0.667903551113069 1 0.367519199848175 experiment 0.664192897773862 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723004 chr16:722997 nonsynonymous SNV 0.000 1 14 hm5C_associated_SNPs_11153 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:722972-723010
64251 chr16 723021 723021 1 + G A rs145260729 723004 + 722984 723024 41 GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCAAGT < 41bp 1 0.72239399075256 1 0.450483173131943 experiment 0.555212018494879 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723004 chr16:723021 nonsynonymous SNV 0.576 2 38 hm5C_associated_SNPs_11155 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:723020-723040
64251 chr16 732545 732545 1 + G A rs199785249 732542 + 732522 732562 41 GGGAGCCCTGGGCAGAAGCCCCCGGCCCCTATACATAGTTT GGGAGCCCTGGGCAGAAGCCCCCAGCCCCTATACATAGTTT < 41bp 1 0.245533842163046 1 0.395357072353363 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control JMJD8;STUB1 ENSG00000103266;ENSG00000161999 UTR3 Human other chr16:732542 chr16:732545 . . 0 24 hm5C_associated_SNPs_11156 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:732536-732559
64251 chr16 765861 765861 1 + G A rs192156658 765862 + 765842 765882 41 GGGTCCCCGCGAGCGCCGGGCCCTCTTCCTGCAGGCCACGC GGGTCCCCGCGAGCGCCGGACCCTCTTCCTGCAGGCCACGC < 41bp 1 0.106597496732684 1 0.0218417346477509 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient METRN ENSG00000103260 CDS Human protein_coding chr16:765862 chr16:765861 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_11157 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:765838-765890
64251 chr16 765861 765861 1 + G A rs192156658 765863 + 765843 765883 41 GGTCCCCGCGAGCGCCGGGCCCTCTTCCTGCAGGCCACGCC GGTCCCCGCGAGCGCCGGACCCTCTTCCTGCAGGCCACGCC < 41bp 1 0.144573448078811 1 0.0300341546535492 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control METRN ENSG00000103260 CDS Human protein_coding chr16:765863 chr16:765861 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_11158 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:765838-765890
64251 chr16 765861 765861 1 + G A rs192156658 765864 + 765844 765884 41 GTCCCCGCGAGCGCCGGGCCCTCTTCCTGCAGGCCACGCCG GTCCCCGCGAGCGCCGGACCCTCTTCCTGCAGGCCACGCCG < 41bp 1 0.354306255426604 1 0.0296259522438049 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METRN ENSG00000103260 CDS Human protein_coding chr16:765864 chr16:765861 nonsynonymous SNV 0.998 0 18 hm5C_associated_SNPs_11159 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:765838-765890
64251 chr16 768566 768566 1 + T C rs115369124 768578 + 768558 768598 41 ATGCCTGATGAGTGCCATGCCCTCTGTGGACACCTGGGGAG ATGCCTGACGAGTGCCATGCCCTCTGTGGACACCTGGGGAG < 41bp 1 0.175189097896708 1 0.234024047851562 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METRN ENSG00000103260 UTR3 Human protein_coding chr16:768578 chr16:768566 . . 0 9 hm5C_associated_SNPs_11160 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:768542-768573
64251 chr16 771181 771181 1 + C G rs56225914 771161 + 771141 771181 41 CGGCCACTTCCGGTGTCGCGCGGCGGCTCCCGGCAGGAGGC CGGCCACTTCCGGTGTCGCGCGGCGGCTCCCGGCAGGAGGG < 41bp 1 0.730048706642084 1 0.720599055290222 experiment 0.539902586715832 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FAM173A ENSG00000103254 UTR5 Human protein_coding chr16:771161 chr16:771181 . . 0 41 hm5C_associated_SNPs_11163 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:771181-771182
64251 chr16 842508 842508 1 + G T rs34595992 842525 + 842505 842545 41 CCGGCTGTGCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGA CCGTCTGTGCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGA < 41bp 1 0.527187012120085 1 0.717051863670349 experiment 0.94562597575983 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842525 chr16:842508 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_11166 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr16 842518 842518 1 + C T rs35387463 842525 + 842505 842545 41 CCGGCTGTGCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGA CCGGCTGTGCCTTTGGGAGGCGGCCGACGGCGCCGGGCAGA < 41bp 1 0.514369507841749 1 0.731044709682465 experiment 0.971260984316502 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842525 chr16:842518 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_11167 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr16 845153 845153 1 + C A rs540750304 845172 + 845152 845192 41 GCGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTG GAGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTG < 41bp 1 0.259966290043537 1 0.240950882434845 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845172 chr16:845153 nonsynonymous SNV 0.728 0 2 hm5C_associated_SNPs_11168 0 0 12 CPSF4 POSTAR2 GSE37401,GSM917667 chr16:845137-845161
64251 chr16 845154 845154 1 + G A rs565850771 845172 + 845152 845192 41 GCGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTG GCATCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTG < 41bp 1 0.295869733356846 1 0.275470823049545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845172 chr16:845154 nonsynonymous SNV 0.583 0 3 hm5C_associated_SNPs_11169 0 0 12 CPSF4 POSTAR2 GSE37401,GSM917667 chr16:845137-845161
64251 chr16 845761 845761 1 + G A rs200036540 845778 + 845758 845798 41 GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC GCCAGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC < 41bp 1 0.40087689223515 1 0.0556770861148834 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845778 chr16:845761 nonsynonymous SNV 0.182 0 4 hm5C_associated_SNPs_11170 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:845748-845787
64251 chr16 845797 845797 1 + G A rs61741082 845778 + 845758 845798 41 GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTAC < 41bp 1 0.425523156910497 1 0.0544635355472565 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845778 chr16:845797 nonsynonymous SNV 0.095 1 40 hm5C_associated_SNPs_11171 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:845780-845800
64251 chr16 845819 845819 1 + A G rs2294446 845820 + 845800 845840 41 TGCTCCTGGACATTCTTGCACCCAAGCTCCGCCCCGTGAGT TGCTCCTGGACATTCTTGCGCCCAAGCTCCGCCCCGTGAGT < 41bp 1 0.226427159857023 1 0.0804927945137024 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845820 chr16:845819 synonymous SNV . 0 20 hm5C_associated_SNPs_11172 0 0 2 BUD13 POSTAR2 ENCODE chr16:845811-845834
64251 chr16 845832 845832 1 + C A rs577654496 845820 + 845800 845840 41 TGCTCCTGGACATTCTTGCACCCAAGCTCCGCCCCGTGAGT TGCTCCTGGACATTCTTGCACCCAAGCTCCGCACCGTGAGT < 41bp 1 0.237198346239905 1 0.0874706506729126 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845820 chr16:845832 nonsynonymous SNV 0.373 4 33 hm5C_associated_SNPs_11173 0 0 2 BUD13 POSTAR2 ENCODE chr16:845811-845834
64251 chr16 1364007 1364007 1 + C G rs200918704 1364009 + 1363989 1364029 41 CCTGACCCCGTGCTCTGCCTCCTGTGTTCCAGGGACTTTGA CCTGACCCCGTGCTCTGCGTCCTGTGTTCCAGGGACTTTGA < 41bp 1 0.0852531595490716 1 0.0440954864025116 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE2I ENSG00000103275 UTR5 Human protein_coding chr16:1364009 chr16:1364007 . . 0 19 hm5C_associated_SNPs_11175 0 0 7 BUD13 POSTAR2 ENCODE chr16:1363954-1364016
64251 chr16 1411894 1411894 1 + G A rs76594024 1411910 + 1411890 1411930 41 GCCCGTTCCACAACGTGACCCAGCACGAGCAGACCTTCCGC GCCCATTCCACAACGTGACCCAGCACGAGCAGACCTTCCGC < 41bp 1 0.787488804542515 1 0.758144974708557 experiment 0.42502239091497 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPTG ENSG00000090581 CDS Human protein_coding chr16:1411910 chr16:1411894 synonymous SNV . 0 5 hm5C_associated_SNPs_11179 1 0 7 FUS POSTAR2 DRA001158,DRS012384 chr16:1411872-1411933
64251 chr16 1545454 1545454 1 + G T rs557890967 1545447 + 1545427 1545467 41 CGCAGTGTCGGCAGCAGACGCAGCCCGGCTTCATCCTGCTC CGCAGTGTCGGCAGCAGACGCAGCCCGTCTTCATCCTGCTC < 41bp 1 0.428339454314946 1 0.203439712524414 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545447 chr16:1545454 nonsynonymous SNV 0.014 1 28 hm5C_associated_SNPs_11181 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:1545453-1545454
64251 chr16 1545467 1545467 1 + C T rs138680627 1545447 + 1545427 1545467 41 CGCAGTGTCGGCAGCAGACGCAGCCCGGCTTCATCCTGCTC CGCAGTGTCGGCAGCAGACGCAGCCCGGCTTCATCCTGCTT < 41bp 1 0.406717876367556 1 0.133038520812988 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545447 chr16:1545467 synonymous SNV . 0 41 hm5C_associated_SNPs_11183 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:1545466-1545467
64251 chr16 1556286 1556286 1 + C A rs141481758 1556292 + 1556272 1556312 41 AGCAGATTCAACTCCGTGGCCGGCCACTTCTTCTTCCCCCT AGCAGATTCAACTCAGTGGCCGGCCACTTCTTCTTCCCCCT < 41bp 1 0.312693266064828 1 0.373676866292953 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1556292 chr16:1556286 nonsynonymous SNV . 0 15 hm5C_associated_SNPs_11184 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:1556276-1556301
64251 chr16 1727152 1727152 1 + C G rs11864354 1727165 + 1727145 1727185 41 AAGAAAACAAGGAAGGAGGCCGGGCGCAGTGGCTCACGCCT AAGAAAAGAAGGAAGGAGGCCGGGCGCAGTGGCTCACGCCT < 41bp 1 0.653984050812815 1 0.735699772834778 experiment 0.692031898374369 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRAMP1 ENSG00000007545 UTR3 Human protein_coding chr16:1727165 chr16:1727152 . . 0 8 hm5C_associated_SNPs_11186 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:1727115-1727152
64251 chr16 1756349 1756349 1 + G A rs139282045 1756352 + 1756332 1756372 41 GTGGCCGCGATGATGGAGATCCAGATGGACGAGGGCGGCGG GTGGCCGCGATGATGGAAATCCAGATGGACGAGGGCGGCGG < 41bp 1 0.644293344967128 1 0.39948558807373 experiment 0.711413310065744 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1756352 chr16:1756349 synonymous SNV . 0 18 hm5C_associated_SNPs_11188 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:1756340-1756360
64251 chr16 1819433 1819433 1 + G A rs2575329 1819426 + 1819406 1819446 41 CCACCCCAGCTGTCCCCTGCCCAGGGAGCTGGCATAAAAGC CCACCCCAGCTGTCCCCTGCCCAGGGAACTGGCATAAAAGC < 41bp 1 0.348690101062133 1 0.88129198551178 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP3 ENSG00000138834 UTR3 Human protein_coding chr16:1819426 chr16:1819433 . . 0 28 hm5C_associated_SNPs_11190 0 0 4 DDX55 POSTAR2 ENCODE chr16:1819391-1819441
64251 chr16 1825290 1825290 1 + G A rs3803571 1825308 + 1825288 1825328 41 GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC GCAGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC < 41bp 1 0.771659259478954 1 0.265077263116837 experiment 0.456681481042092 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1825308 chr16:1825290 nonsynonymous SNV . 0 3 hm5C_associated_SNPs_11192 0 0 16 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr16 1825293 1825293 1 + G A rs530913047 1825308 + 1825288 1825328 41 GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC GCGGGAAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC < 41bp 1 0.777755321112478 1 0.303867995738983 experiment 0.444489357775043 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1825308 chr16:1825293 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_11193 0 0 18 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr16 1825321 1825321 1 + G A rs141898850 1825308 + 1825288 1825328 41 GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCACCAGCAC < 41bp 1 0.743355053812804 1 0.309544384479523 experiment 0.513289892374391 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1825308 chr16:1825321 nonsynonymous SNV 0.901 0 34 hm5C_associated_SNPs_11194 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:1825297-1825335
64251 chr16 1877393 1877393 1 + G A rs201966044 1877400 + 1877380 1877420 41 GGCCTACGCGCCCGAGGGCTCGCCCATCCTCATGCCCGCGT GGCCTACGCGCCCAAGGGCTCGCCCATCCTCATGCCCGCGT < 41bp 1 0.774978646095999 1 0.0499427914619446 experiment 0.450042707808003 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877400 chr16:1877393 nonsynonymous SNV 0.998 2 14 hm5C_associated_SNPs_11195 0 0 1 RPS3 POSTAR2 ENCODE chr16:1877360-1877426
64251 chr16 2011269 2011269 1 + C T rs201009092 2011276 + 2011256 2011296 41 GCATGTATGAAGCCGAAATGCAGTGGAAGAGGGACTAGTAC GCATGTATGAAGCTGAAATGCAGTGGAAGAGGGACTAGTAC < 41bp 1 0.712272705169482 1 0.510891914367676 experiment 0.575454589661036 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011276 chr16:2011269 synonymous SNV . 0 14 hm5C_associated_SNPs_11197 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr16 2011675 2011675 1 + C T rs201026820 2011691 + 2011671 2011711 41 TCCTCCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC TCCTTCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC < 41bp 1 0.554537193570269 1 0.530394375324249 experiment 0.890925612859462 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011691 chr16:2011675 synonymous SNV . 0 5 hm5C_associated_SNPs_11198 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr16 2011685 2011685 1 + G A rs199907517 2011691 + 2011671 2011711 41 TCCTCCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC TCCTCCTGAGGCCTAGGGGCCAGAACCATTGCAAATCTTCC < 41bp 1 0.57992812465098 1 0.532040894031525 experiment 0.84014375069804 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011691 chr16:2011685 nonsynonymous SNV 0.003 1 15 hm5C_associated_SNPs_11199 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr16 2011696 2011696 1 + C T rs145006994 2011691 + 2011671 2011711 41 TCCTCCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC TCCTCCTGAGGCCTGGGGGCCAGAATCATTGCAAATCTTCC < 41bp 1 0.646466835618886 1 0.548979640007019 experiment 0.707066328762229 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011691 chr16:2011696 synonymous SNV . 0 26 hm5C_associated_SNPs_11200 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr16 2011925 2011925 1 + C G rs74903026 2011924 + 2011904 2011944 41 CTGAGGCAGCTGTGGGTGCCCCTGCTGTGTGGCTCTGTATG CTGAGGCAGCTGTGGGTGCCCGTGCTGTGTGGCTCTGTATG < 41bp 1 0.499273737825381 1 0.278870314359665 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFB10 ENSG00000140990 UTR3 Human protein_coding chr16:2011924 chr16:2011925 . . 0 22 hm5C_associated_SNPs_11201 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011753-2011977
64251 chr16 2011925 2011925 1 + C G rs74903026 2011938 + 2011918 2011958 41 GGTGCCCCTGCTGTGTGGCTCTGTATGACTGTTGCTGAAAT GGTGCCCGTGCTGTGTGGCTCTGTATGACTGTTGCTGAAAT < 41bp 1 0.717539336508932 1 0.426189005374908 experiment 0.564921326982137 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFB10 ENSG00000140990 UTR3 Human protein_coding chr16:2011938 chr16:2011925 . . 0 8 hm5C_associated_SNPs_11202 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011753-2011977
64251 chr16 2015245 2015245 1 + C A rs17135730 2015236 + 2015216 2015256 41 TGGCCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCC TGGCCGCGGGTGAGATTCGGCGCCCAGAGACCCCGGGGGCC < 41bp 1 0.34135870787951 1 0.272253185510635 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015236 chr16:2015245 . . 0 30 hm5C_associated_SNPs_11203 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015245 2015245 1 + C A rs17135730 2015239 + 2015219 2015259 41 CCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCCTCA CCGCGGGTGAGATTCGGCGCCCAGAGACCCCGGGGGCCTCA < 41bp 1 0.548502951885231 1 0.153854429721832 experiment 0.902994096229538 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015239 chr16:2015245 . . 0 27 hm5C_associated_SNPs_11204 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015245 2015245 1 + C A rs17135730 2015247 + 2015227 2015267 41 GAGATTCGGCGCCCAGAGCCCCCGGGGGCCTCAGCTCACCG GAGATTCGGCGCCCAGAGACCCCGGGGGCCTCAGCTCACCG < 41bp 1 0.601801455637175 1 0.688582479953766 experiment 0.79639708872565 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015247 chr16:2015245 . . 0 19 hm5C_associated_SNPs_11205 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015245 2015245 1 + C A rs17135730 2015256 + 2015236 2015276 41 CGCCCAGAGCCCCCGGGGGCCTCAGCTCACCGCGCGCTGCC CGCCCAGAGACCCCGGGGGCCTCAGCTCACCGCGCGCTGCC < 41bp 1 0.339126836778779 1 0.0451457500457764 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015256 chr16:2015245 . . 0 10 hm5C_associated_SNPs_11206 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015256 2015256 1 + C T rs371847121 2015236 + 2015216 2015256 41 TGGCCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCC TGGCCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCT < 41bp 1 0.306774519110573 1 0.284157186746597 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015236 chr16:2015256 . . 0 41 hm5C_associated_SNPs_11207 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015256 2015256 1 + C T rs371847121 2015239 + 2015219 2015259 41 CCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCCTCA CCGCGGGTGAGATTCGGCGCCCAGAGCCCCCGGGGGCTTCA < 41bp 1 0.477927362183901 1 0.286708742380142 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015239 chr16:2015256 . . 0 38 hm5C_associated_SNPs_11208 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015256 2015256 1 + C T rs371847121 2015247 + 2015227 2015267 41 GAGATTCGGCGCCCAGAGCCCCCGGGGGCCTCAGCTCACCG GAGATTCGGCGCCCAGAGCCCCCGGGGGCTTCAGCTCACCG < 41bp 1 0.550686474585737 1 0.579084515571594 experiment 0.898627050828525 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015247 chr16:2015256 . . 0 30 hm5C_associated_SNPs_11209 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2015256 2015256 1 + C T rs371847121 2015276 + 2015256 2015296 41 CTCAGCTCACCGCGCGCTGCCCCATGTGCGGCGGTGAAACC TTCAGCTCACCGCGCGCTGCCCCATGTGCGGCGGTGAAACC < 41bp 1 0.150697854760611 1 0.174708008766174 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA78 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015276 chr16:2015256 . . 0 1 hm5C_associated_SNPs_11210 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2015180-2015300
64251 chr16 2034276 2034276 1 + G C rs535377905 2034282 + 2034262 2034302 41 CTCTTCTTCCTGCCGGGGGGCGCGCGCTCCGAGATGATGGA CTCTTCTTCCTGCCCGGGGGCGCGCGCTCCGAGATGATGGA < 41bp 1 0.36073418529683 1 0.328366041183472 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GFER ENSG00000127554 CDS Human protein_coding chr16:2034282 chr16:2034276 synonymous SNV . 0 15 hm5C_associated_SNPs_11211 1 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2034258-2034279
64251 chr16 2106216 2106216 1 + G A rs139929314 2106203 + 2106183 2106223 41 GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCGTCCGGAC GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCATCCGGAC < 41bp 1 0.244354962437337 1 0.236528247594833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2106203 chr16:2106216 nonsynonymous SNV 0.564 0 34 hm5C_associated_SNPs_11219 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2106203-2106238
64251 chr16 2258943 2258943 1 + G A rs568021864 2258956 + 2258936 2258976 41 GCACCCAGGTCAGAGCAGACCCTCCCCTGCCGGCCTGCGCC GCACCCAAGTCAGAGCAGACCCTCCCCTGCCGGCCTGCGCC < 41bp 1 0.144029957591292 1 0.0594737827777863 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MLST8 ENSG00000167965 UTR3 Human protein_coding chr16:2258956 chr16:2258943 . . 0 8 hm5C_associated_SNPs_11221 0 0 3 BUD13 POSTAR2 ENCODE chr16:2258916-2258978
64251 chr16 2258971 2258971 1 + T A rs536620725 2258956 + 2258936 2258976 41 GCACCCAGGTCAGAGCAGACCCTCCCCTGCCGGCCTGCGCC GCACCCAGGTCAGAGCAGACCCTCCCCTGCCGGCCAGCGCC < 41bp 1 0.165504305630362 1 0.0529880821704865 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MLST8 ENSG00000167965 UTR3 Human protein_coding chr16:2258956 chr16:2258971 . . 0 36 hm5C_associated_SNPs_11222 0 0 3 BUD13 POSTAR2 ENCODE chr16:2258916-2258978
64251 chr16 2258973 2258973 1 + C T rs191875808 2258956 + 2258936 2258976 41 GCACCCAGGTCAGAGCAGACCCTCCCCTGCCGGCCTGCGCC GCACCCAGGTCAGAGCAGACCCTCCCCTGCCGGCCTGTGCC < 41bp 1 0.141986676342265 1 0.0299346148967743 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MLST8 ENSG00000167965 UTR3 Human protein_coding chr16:2258956 chr16:2258973 . . 0 38 hm5C_associated_SNPs_11223 0 0 3 BUD13 POSTAR2 ENCODE chr16:2258916-2258978
64251 chr16 2284192 2284192 1 + G A rs137969975 2284209 + 2284189 2284229 41 TGCGCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCT TGCACGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCT < 41bp 1 0.0515984913662152 1 0.0898837149143219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284209 chr16:2284192 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_11224 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:2284079-2284199
64251 chr16 2284192 2284192 1 + G A rs137969975 2284212 + 2284192 2284232 41 GCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCTCAA ACGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCTCAA < 41bp 1 0.620495220539956 1 0.249243944883347 experiment 0.759009558920088 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284212 chr16:2284192 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_11225 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:2284079-2284199
64251 chr16 2506927 2506927 1 + C T rs370448527 2506934 + 2506914 2506954 41 CCCCCAAGTCCCCCGGAGAGCAGTGTTCCCCAGCAACAGGT CCCCCAAGTCCCCTGGAGAGCAGTGTTCCCCAGCAACAGGT < 41bp 1 0.340439846509707 1 0.186806797981262 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCNF ENSG00000162063 CDS Human protein_coding chr16:2506934 chr16:2506927 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_11227 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2506896-2506934
64251 chr16 2563995 2563995 1 + G A rs552017485 2563979 + 2563959 2563999 41 CGGTGCTGGTATTTAGAGCGCAGCGGCTGACGGGCCGGATC CGGTGCTGGTATTTAGAGCGCAGCGGCTGACGGGCCAGATC < 41bp 1 0.706793800986264 1 0.497854471206665 experiment 0.586412398027472 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0C ENSG00000185883;ENSG00000259784 UTR5 Human other chr16:2563979 chr16:2563995 . . 0 37 hm5C_associated_SNPs_11229 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:2563940-2564080
64251 chr16 2564095 2564095 1 + A G rs11546341 2564089 + 2564069 2564109 41 CGGCCCGCAGAGCTTGCCCCCTCCCCACCCGCAGACATGTC CGGCCCGCAGAGCTTGCCCCCTCCCCGCCCGCAGACATGTC < 41bp 1 0.397517094979539 1 0.263631582260132 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP6V0C ENSG00000185883;ENSG00000259784 UTR5 Human other chr16:2564089 chr16:2564095 . . 0 27 hm5C_associated_SNPs_11230 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:2564063-2564119
64251 chr16 2577854 2577854 1 + G A rs148567595 2577853 + 2577833 2577873 41 CACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT CACCTCCGCTCCTTCGAGGCCAATGCCTTCCAGGACTTGCT < 41bp 1 0.0943292401329214 1 0.0887404978275299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577853 chr16:2577854 nonsynonymous SNV 0.831 0 22 hm5C_associated_SNPs_11231 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2577854-2577885
64251 chr16 2636802 2636802 1 + C T rs532663585 2636784 + 2636764 2636804 41 CCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCACGA CCCCAGAGGTCAGGCAGCAACATAGAGCAGTACATTCATGA < 41bp 1 0.236662324661899 1 0.251347988843918 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDPK1 ENSG00000140992 CDS Human protein_coding chr16:2636784 chr16:2636802 synonymous SNV . 0 39 hm5C_associated_SNPs_11232 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2636780-2636829
64251 chr16 2732753 2732753 1 + C A rs538915638 2732745 + 2732725 2732765 41 GGCAGACCCTGTGCCGGGACCCGAAATCCTTCCTGTACCGC GGCAGACCCTGTGCCGGGACCCGAAATCATTCCTGTACCGC < 41bp 1 0.519084920870398 1 0.422842562198639 experiment 0.961830158259204 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2732745 chr16:2732753 synonymous SNV . 0 29 hm5C_associated_SNPs_11233 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2732729-2732761
64251 chr16 2757806 2757806 1 + C T rs116113618 2757812 + 2757792 2757832 41 CTCTGCCTCCCAGGCGGGATCGCTGGTTTCTCTCGACCTCG CTCTGCCTCCCAGGTGGGATCGCTGGTTTCTCTCGACCTCG < 41bp 1 0.651367238376434 1 0.323053628206253 experiment 0.697265523247133 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2757812 chr16:2757806 . . 0 15 hm5C_associated_SNPs_11234 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2757758-2757817
64251 chr16 2758551 2758551 1 + C T rs56746195 2758568 + 2758548 2758588 41 CCGCCTGCAGGTCAGAGGCTCTGACACTGTCTGGTTTCCAA CCGTCTGCAGGTCAGAGGCTCTGACACTGTCTGGTTTCCAA < 41bp 1 0.493924996583805 1 0.104407519102097 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2758568 chr16:2758551 . . 0 4 hm5C_associated_SNPs_11235 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:2758545-2758555
64251 chr16 2758569 2758569 1 + T A rs115678449 2758568 + 2758548 2758588 41 CCGCCTGCAGGTCAGAGGCTCTGACACTGTCTGGTTTCCAA CCGCCTGCAGGTCAGAGGCTCAGACACTGTCTGGTTTCCAA < 41bp 1 0.585240976723963 1 0.274328470230103 experiment 0.829518046552074 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2758568 chr16:2758569 . . 0 22 hm5C_associated_SNPs_11236 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:2758546-2758572
64251 chr16 2812498 2812498 1 + C G rs199497812 2812509 + 2812489 2812529 41 AGACGTGGCCGCTCACGCTCCAGAACCCCAGCCAGACGTGG AGACGTGGCGGCTCACGCTCCAGAACCCCAGCCAGACGTGG < 41bp 1 0.611571858675064 1 0.841499388217926 experiment 0.776856282649871 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812509 chr16:2812498 nonsynonymous SNV 0.008 2 10 hm5C_associated_SNPs_11237 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr16:2812452-2812511
64251 chr16 2816034 2816034 1 + T C rs138735123 2816031 + 2816011 2816051 41 CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG CAGGAAAGTTCCCGGACCTCCTCCCGACGCCGAAGAGGCCG < 41bp 1 0.272336080312491 1 0.511520385742188 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816031 chr16:2816034 synonymous SNV . 0 24 hm5C_associated_SNPs_11238 0 0 31 FMR1 POSTAR2 GSE39682,GSM977615 chr16:2815943-2816044
64251 chr16 2816034 2816034 1 + T C rs138735123 2816050 + 2816030 2816070 41 CCTCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC CCTCCCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC < 41bp 1 0.180822380559732 1 0.0738278329372406 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816050 chr16:2816034 synonymous SNV . 0 5 hm5C_associated_SNPs_11239 0 0 31 FMR1 POSTAR2 GSE39682,GSM977615 chr16:2815943-2816044
64251 chr16 2816034 2816034 1 + T C rs138735123 2816052 + 2816032 2816072 41 TCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG TCCCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG < 41bp 1 0.172283164489198 1 0.103339731693268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816052 chr16:2816034 synonymous SNV . 0 3 hm5C_associated_SNPs_11240 0 0 31 FMR1 POSTAR2 GSE39682,GSM977615 chr16:2815943-2816044
64251 chr16 2816057 2816057 1 + G A rs149546164 2816050 + 2816030 2816070 41 CCTCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC CCTCTCGACGCCGAAGAGGCCGCTCTCAGACACCCCCAACC < 41bp 1 0.160104637023736 1 0.129034698009491 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816050 chr16:2816057 nonsynonymous SNV 0.998 3 28 hm5C_associated_SNPs_11241 0 0 19 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816057 2816057 1 + G A rs149546164 2816052 + 2816032 2816072 41 TCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG TCTCGACGCCGAAGAGGCCGCTCTCAGACACCCCCAACCAG < 41bp 1 0.153215941417401 1 0.13669341802597 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816052 chr16:2816057 nonsynonymous SNV 0.998 3 26 hm5C_associated_SNPs_11242 0 0 19 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2818185 2818185 1 + C G rs59593256 2818203 + 2818183 2818223 41 TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG TCGTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG < 41bp 1 0.0925632359940779 1 0.363790035247803 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818203 chr16:2818185 synonymous SNV . 0 3 hm5C_associated_SNPs_11243 0 0 39 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2818170-2818198
64251 chr16 2949175 2949175 1 + A G rs7204314 2949190 + 2949170 2949210 41 CTCCCAGGCCACCAACCCAGCCATAGGCTCTTCTCTGTCCG CTCCCGGGCCACCAACCCAGCCATAGGCTCTTCTCTGTCCG < 41bp 1 0.258523267958709 1 0.0801565647125244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLYWCH2 ENSG00000162076 UTR3 Human protein_coding chr16:2949190 chr16:2949175 . . 0 6 hm5C_associated_SNPs_11244 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2949108-2949210
64251 chr16 2949209 2949209 1 + C G rs1052167 2949190 + 2949170 2949210 41 CTCCCAGGCCACCAACCCAGCCATAGGCTCTTCTCTGTCCG CTCCCAGGCCACCAACCCAGCCATAGGCTCTTCTCTGTCGG < 41bp 1 0.260759226455309 1 0.0871668756008148 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLYWCH2 ENSG00000162076 UTR3 Human protein_coding chr16:2949190 chr16:2949209 . . 0 40 hm5C_associated_SNPs_11245 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2949108-2949210
64251 chr16 2964283 2964283 1 + G A rs2074365 2964282 + 2964262 2964302 41 ATGGTGACGCTTCTCACTCACGTGTGAAGGTAATTCTGTGG ATGGTGACGCTTCTCACTCACATGTGAAGGTAATTCTGTGG < 41bp 1 0.339561277502381 1 0.257580697536469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLYWCH1 ENSG00000059122 UTR5 Human protein_coding chr16:2964282 chr16:2964283 . . 0 22 hm5C_associated_SNPs_11246 0 0 4 BUD13 POSTAR2 ENCODE chr16:2964171-2964295
64251 chr16 2998938 2998938 1 + G A rs11552142 2998937 + 2998917 2998957 41 AGAACAGTGCTCAGAGCTGGCGCTTGCAGACGCAGCTGTCG AGAACAGTGCTCAGAGCTGGCACTTGCAGACGCAGCTGTCG < 41bp 1 0.27446096433386 1 0.0583894550800323 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLYWCH1 ENSG00000059122 CDS Human protein_coding chr16:2998937 chr16:2998938 unknown . 0 22 hm5C_associated_SNPs_11247 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:2998927-2998948
64251 chr16 2999608 2999608 1 + C A rs538191771 2999623 + 2999603 2999643 41 CAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGC CAGAGACTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGC < 41bp 1 0.645986243761581 1 0.927721679210663 experiment 0.708027512476837 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999623 chr16:2999608 . . 0 6 hm5C_associated_SNPs_11248 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:2999584-2999615
64251 chr16 2999613 2999613 1 + T C rs143750803 2999623 + 2999603 2999643 41 CAGAGCCTCCTCCTTACTAACAAGGACCTGTCCGCAGCCGC CAGAGCCTCCCCCTTACTAACAAGGACCTGTCCGCAGCCGC < 41bp 1 0.645798866650606 1 0.912078738212585 experiment 0.708402266698787 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLYWCH1 ENSG00000262482 ncRNA_intronic Human antisense chr16:2999623 chr16:2999613 . . 0 11 hm5C_associated_SNPs_11249 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:2999584-2999615
64251 chr16 3021986 3021986 1 + G C rs114149600 3021974 + 3021954 3021994 41 CCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAAC CCATGCCAGCCTGCCCACAGCAGCCTCCTAGACTTAGCAAC < 41bp 1 0.371054953041008 1 0.229553043842316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3021974 chr16:3021986 . . 0 33 hm5C_associated_SNPs_11250 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:3021980-3022000
64251 chr16 3021987 3021987 1 + T C rs115784080 3021974 + 3021954 3021994 41 CCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAAC CCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGCTAGCAAC < 41bp 1 0.370777972748053 1 0.184141010046005 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3021974 chr16:3021987 . . 0 34 hm5C_associated_SNPs_11251 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:3021980-3022000
64251 chr16 3022474 3022474 1 + G T rs553695782 3022483 + 3022463 3022503 41 GGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCAC GGACCAAGGGGTCGTGGACCCGTCTTGTACCAGCTGGCCAC < 41bp 1 0.536087336458168 1 0.206274598836899 experiment 0.927825327083664 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022483 chr16:3022474 . . 0 12 hm5C_associated_SNPs_11252 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3022299-3022483
64251 chr16 3022484 3022484 1 + G A rs190250606 3022483 + 3022463 3022503 41 GGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCAC GGACCAAGGGGGCGTGGACCCATCTTGTACCAGCTGGCCAC < 41bp 1 0.547072762645819 1 0.392889857292175 experiment 0.905854474708363 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAQR4 ENSG00000162073 UTR3 Human protein_coding chr16:3022483 chr16:3022484 . . 0 22 hm5C_associated_SNPs_11253 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:3022360-3022500
64251 chr16 3022793 3022793 1 + T G rs4149806 3022796 + 3022776 3022816 41 GACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGC GACAGGAAGGGCCATGTGGCCACATGAGCAAGCTTGGGTGC < 41bp 1 0.558220144229879 1 0.523958504199982 experiment 0.883559711540241 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAQR4;PKMYT1 ENSG00000127564;ENSG00000162073 UTR3 Human other chr16:3022796 chr16:3022793 . . 0 18 hm5C_associated_SNPs_11254 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:3022762-3022794
64251 chr16 3208933 3208933 1 + T A rs575772761 3208925 + 3208905 3208945 41 GAGAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGA GAGAACGTTTGTCGTCCTGGCTCGTTGGACTAGGGGTATGA < 41bp 1 0.504326746194426 1 0.270119398832321 experiment 0.991346507611149 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208925 chr16:3208933 . . 0 29 hm5C_associated_SNPs_11255 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208933 3208933 1 + T A rs575772761 3208927 + 3208907 3208947 41 GAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATT GAACGTTTGTCGTCCTGGCTCGTTGGACTAGGGGTATGATT < 41bp 1 0.20043038972197 1 0.263422906398773 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208927 chr16:3208933 . . 0 27 hm5C_associated_SNPs_11256 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208933 3208933 1 + T A rs575772761 3208934 + 3208914 3208954 41 TGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGTCGTCCTGGCTCGTTGGACTAGGGGTATGATTCTCGCTT < 41bp 1 0.716621736281078 1 0.329322725534439 experiment 0.566756527437845 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208934 chr16:3208933 . . 0 20 hm5C_associated_SNPs_11257 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208933 3208933 1 + T A rs575772761 3208948 + 3208928 3208968 41 GTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT GTTGGACTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT < 41bp 1 0.783434961717693 1 0.804482221603394 experiment 0.433130076564615 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208948 chr16:3208933 . . 0 6 hm5C_associated_SNPs_11258 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208933 3208933 1 + T A rs575772761 3208950 + 3208930 3208970 41 TGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC TGGACTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC < 41bp 1 0.422003938463398 1 0.465089172124863 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208950 chr16:3208933 . . 0 4 hm5C_associated_SNPs_11259 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208933 3208933 1 + T A rs575772761 3208952 + 3208932 3208972 41 GTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG GACTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG < 41bp 1 0.264198828119197 1 0.119610130786896 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208952 chr16:3208933 . . 0 2 hm5C_associated_SNPs_11260 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208925 + 3208905 3208945 41 GAGAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGA GAGAACGTTTGTCGTCCTGGCTCGTTGGTCCAGGGGTATGA < 41bp 1 0.559454175624058 1 0.0893347561359406 experiment 0.881091648751884 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208925 chr16:3208935 . . 0 31 hm5C_associated_SNPs_11261 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208927 + 3208907 3208947 41 GAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATT GAACGTTTGTCGTCCTGGCTCGTTGGTCCAGGGGTATGATT < 41bp 1 0.236262857404371 1 0.0971091091632843 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208927 chr16:3208935 . . 0 29 hm5C_associated_SNPs_11262 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208934 + 3208914 3208954 41 TGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGTCGTCCTGGCTCGTTGGTCCAGGGGTATGATTCTCGCTT < 41bp 1 0.549702297778188 1 0.664974331855774 experiment 0.900595404443624 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208934 chr16:3208935 . . 0 22 hm5C_associated_SNPs_11263 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208948 + 3208928 3208968 41 GTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT GTTGGTCCAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT < 41bp 1 0.757081883681323 1 0.728356122970581 experiment 0.485836232637355 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208948 chr16:3208935 . . 0 8 hm5C_associated_SNPs_11264 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208950 + 3208930 3208970 41 TGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC TGGTCCAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC < 41bp 1 0.432622985030362 1 0.171296507120132 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208950 chr16:3208935 . . 0 6 hm5C_associated_SNPs_11265 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208935 3208935 1 + T C rs564434880 3208952 + 3208932 3208972 41 GTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG GTCCAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG < 41bp 1 0.302578003022798 1 0.0860982835292816 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208952 chr16:3208935 . . 0 4 hm5C_associated_SNPs_11266 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208925 + 3208905 3208945 41 GAGAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGA GAGAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGAGTATGA < 41bp 1 0.468060558613509 1 0.161034017801285 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208925 chr16:3208939 . . 0 35 hm5C_associated_SNPs_11267 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208927 + 3208907 3208947 41 GAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATT GAACGTTTGTCGTCCTGGCTCGTTGGTCTAGGAGTATGATT < 41bp 1 0.232050962470167 1 0.262251317501068 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208927 chr16:3208939 . . 0 33 hm5C_associated_SNPs_11268 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208934 + 3208914 3208954 41 TGTCGTCCTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGTCGTCCTGGCTCGTTGGTCTAGGAGTATGATTCTCGCTT < 41bp 1 0.691665699164764 1 0.302894413471222 experiment 0.616668601670471 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208934 chr16:3208939 . . 0 26 hm5C_associated_SNPs_11269 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208948 + 3208928 3208968 41 GTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT GTTGGTCTAGGAGTATGATTCTCGCTTTGGGTGCGAGAGGT < 41bp 1 0.71501241784294 1 0.771729588508606 experiment 0.569975164314121 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208948 chr16:3208939 . . 0 12 hm5C_associated_SNPs_11270 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208950 + 3208930 3208970 41 TGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC TGGTCTAGGAGTATGATTCTCGCTTTGGGTGCGAGAGGTCC < 41bp 1 0.378331195871588 1 0.313504874706268 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208950 chr16:3208939 . . 0 10 hm5C_associated_SNPs_11271 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208939 3208939 1 + G A rs553500770 3208952 + 3208932 3208972 41 GTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG GTCTAGGAGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG < 41bp 1 0.268867227862759 1 0.0881012380123138 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208952 chr16:3208939 . . 0 8 hm5C_associated_SNPs_11272 0 0 14 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208900-3208940
64251 chr16 3208961 3208961 1 + C A rs550170016 3208948 + 3208928 3208968 41 GTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCGCTTTGGGTGAGAGAGGT < 41bp 1 0.730246529777568 1 0.722820162773132 experiment 0.539506940444864 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208948 chr16:3208961 . . 0 34 hm5C_associated_SNPs_11273 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208961 3208961 1 + C A rs550170016 3208950 + 3208930 3208970 41 TGGTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTTGGGTGAGAGAGGTCC < 41bp 1 0.439617602470031 1 0.321597218513489 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208950 chr16:3208961 . . 0 32 hm5C_associated_SNPs_11274 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208961 3208961 1 + C A rs550170016 3208952 + 3208932 3208972 41 GTCTAGGGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTTGGGTGAGAGAGGTCCCG < 41bp 1 0.277614362827455 1 0.0636078715324402 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208952 chr16:3208961 . . 0 30 hm5C_associated_SNPs_11275 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208961 3208961 1 + C A rs550170016 3208969 + 3208949 3208989 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGAGAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.731107398677046 1 0.5018350481987 experiment 0.537785202645908 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208969 chr16:3208961 . . 0 13 hm5C_associated_SNPs_11276 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208961 3208961 1 + C A rs550170016 3208970 + 3208950 3208990 41 CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTTGGGTGAGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.765713852044039 1 0.720444738864899 experiment 0.468572295911922 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208970 chr16:3208961 . . 0 12 hm5C_associated_SNPs_11277 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208961 3208961 1 + C A rs550170016 3208977 + 3208957 3208997 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCT GGTGAGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCT < 41bp 1 0.337899003929483 1 0.563344478607178 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208977 chr16:3208961 . . 0 5 hm5C_associated_SNPs_11278 0 0 6 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr16:3208960-3208980
64251 chr16 3208985 3208985 1 + G A rs539044007 3208969 + 3208949 3208989 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCAGACG < 41bp 1 0.735953759374086 1 0.492592513561249 experiment 0.528092481251829 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208969 chr16:3208985 . . 0 37 hm5C_associated_SNPs_11279 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208985 3208985 1 + G A rs539044007 3208970 + 3208950 3208990 41 CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCAGACGA < 41bp 1 0.772003666914218 1 0.731367707252502 experiment 0.455992666171564 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208970 chr16:3208985 . . 0 36 hm5C_associated_SNPs_11280 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208985 3208985 1 + G A rs539044007 3208977 + 3208957 3208997 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCT GGTGCGAGAGGTCCCGGGTTCAAATCCCAGACGAGCCCGCT < 41bp 1 0.291601891661972 1 0.785971522331238 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208977 chr16:3208985 . . 0 29 hm5C_associated_SNPs_11281 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208985 3208985 1 + G A rs539044007 3208982 + 3208962 3209002 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCTTTTTT GAGAGGTCCCGGGTTCAAATCCCAGACGAGCCCGCTTTTTT < 41bp 1 0.273657359304345 1 0.7204869389534 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208982 chr16:3208985 . . 0 24 hm5C_associated_SNPs_11282 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208985 3208985 1 + G A rs539044007 3208994 + 3208974 3209014 41 GTTCAAATCCCGGACGAGCCCGCTTTTTTTTTTTTTTCTGA GTTCAAATCCCAGACGAGCCCGCTTTTTTTTTTTTTTCTGA < 41bp 1 0.238182963162751 1 0.252350866794586 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208994 chr16:3208985 . . 0 12 hm5C_associated_SNPs_11283 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208988 3208988 1 + C A rs372301322 3208969 + 3208949 3208989 41 TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGAAG < 41bp 1 0.767540015359195 1 0.705409467220306 experiment 0.46491996928161 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208969 chr16:3208988 . . 0 40 hm5C_associated_SNPs_11284 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208988 3208988 1 + C A rs372301322 3208970 + 3208950 3208990 41 CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTTGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGAAGA < 41bp 1 0.734729441386222 1 0.791723012924194 experiment 0.530541117227555 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208970 chr16:3208988 . . 0 39 hm5C_associated_SNPs_11285 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208988 3208988 1 + C A rs372301322 3208977 + 3208957 3208997 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCT GGTGCGAGAGGTCCCGGGTTCAAATCCCGGAAGAGCCCGCT < 41bp 1 0.324304416893255 1 0.694439053535461 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208977 chr16:3208988 . . 0 32 hm5C_associated_SNPs_11286 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208988 3208988 1 + C A rs372301322 3208982 + 3208962 3209002 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCTTTTTT GAGAGGTCCCGGGTTCAAATCCCGGAAGAGCCCGCTTTTTT < 41bp 1 0.554051047167205 1 0.789077281951904 experiment 0.891897905665589 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208982 chr16:3208988 . . 0 27 hm5C_associated_SNPs_11287 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3208988 3208988 1 + C A rs372301322 3208994 + 3208974 3209014 41 GTTCAAATCCCGGACGAGCCCGCTTTTTTTTTTTTTTCTGA GTTCAAATCCCGGAAGAGCCCGCTTTTTTTTTTTTTTCTGA < 41bp 1 0.277029376008104 1 0.448884665966034 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208994 chr16:3208988 . . 0 15 hm5C_associated_SNPs_11288 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr16 3222057 3222057 1 + G A rs148821785 3222051 + 3222031 3222071 41 GGAAATACACGCACGGGAGGCTCGTTGGTCTAGGGGTATGA GGAAATACACGCACGGGAGGCTCGTTAGTCTAGGGGTATGA < 41bp 1 0.454420270179847 1 0.129819273948669 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222051 chr16:3222057 . . 0 27 hm5C_associated_SNPs_11289 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222020-3222060
64251 chr16 3222057 3222057 1 + G A rs148821785 3222053 + 3222033 3222073 41 AAATACACGCACGGGAGGCTCGTTGGTCTAGGGGTATGATT AAATACACGCACGGGAGGCTCGTTAGTCTAGGGGTATGATT < 41bp 1 0.35538273426911 1 0.0406036674976349 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222053 chr16:3222057 . . 0 25 hm5C_associated_SNPs_11290 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222020-3222060
64251 chr16 3222057 3222057 1 + G A rs148821785 3222060 + 3222040 3222080 41 CGCACGGGAGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT CGCACGGGAGGCTCGTTAGTCTAGGGGTATGATTCTCGCTT < 41bp 1 0.779648862078817 1 0.800898253917694 experiment 0.440702275842367 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222060 chr16:3222057 . . 0 18 hm5C_associated_SNPs_11291 0 0 21 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222020-3222060
64251 chr16 3222109 3222109 1 + C G rs150958924 3222096 + 3222076 3222116 41 CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCGCGGACGA < 41bp 1 0.779709077578743 1 0.710744619369507 experiment 0.440581844842515 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222096 chr16:3222109 . . 0 34 hm5C_associated_SNPs_11292 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222109 3222109 1 + C G rs150958924 3222103 + 3222083 3222123 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAG GGTGCGAGAGGTCCCGGGTTCAAATCGCGGACGAGCCCTAG < 41bp 1 0.474757513588875 1 0.595813155174255 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222103 chr16:3222109 . . 0 27 hm5C_associated_SNPs_11293 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222109 3222109 1 + C G rs150958924 3222110 + 3222090 3222130 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGT GAGGTCCCGGGTTCAAATCGCGGACGAGCCCTAGAAGTGGT < 41bp 1 0.339924472622681 1 0.675653278827667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222110 chr16:3222109 . . 0 20 hm5C_associated_SNPs_11294 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222109 3222109 1 + C G rs150958924 3222114 + 3222094 3222134 41 TCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACT TCCCGGGTTCAAATCGCGGACGAGCCCTAGAAGTGGTTACT < 41bp 1 0.170614787738426 1 0.515015840530396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222114 chr16:3222109 . . 0 16 hm5C_associated_SNPs_11295 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222109 3222109 1 + C G rs150958924 3222118 + 3222098 3222138 41 GGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTC GGGTTCAAATCGCGGACGAGCCCTAGAAGTGGTTACTTTTC < 41bp 1 0.227462883414419 1 0.130284130573273 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222118 chr16:3222109 . . 0 12 hm5C_associated_SNPs_11296 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222109 3222109 1 + C G rs150958924 3222119 + 3222099 3222139 41 GGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTCC GGTTCAAATCGCGGACGAGCCCTAGAAGTGGTTACTTTTCC < 41bp 1 0.120172710019617 1 0.134167939424515 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222119 chr16:3222109 . . 0 11 hm5C_associated_SNPs_11297 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222096 + 3222076 3222116 41 CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCCTGGACGA < 41bp 1 0.793817231426204 1 0.672136247158051 experiment 0.412365537147592 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222096 chr16:3222110 . . 0 35 hm5C_associated_SNPs_11298 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222103 + 3222083 3222123 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAG GGTGCGAGAGGTCCCGGGTTCAAATCCTGGACGAGCCCTAG < 41bp 1 0.426194454477485 1 0.653481066226959 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222103 chr16:3222110 . . 0 28 hm5C_associated_SNPs_11299 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222108 + 3222088 3222128 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTG GAGAGGTCCCGGGTTCAAATCCTGGACGAGCCCTAGAAGTG < 41bp 1 0.283451377134718 1 0.841915607452393 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222108 chr16:3222110 . . 0 23 hm5C_associated_SNPs_11300 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222114 + 3222094 3222134 41 TCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACT TCCCGGGTTCAAATCCTGGACGAGCCCTAGAAGTGGTTACT < 41bp 1 0.169044506474188 1 0.275790005922318 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222114 chr16:3222110 . . 0 17 hm5C_associated_SNPs_11301 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222118 + 3222098 3222138 41 GGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTC GGGTTCAAATCCTGGACGAGCCCTAGAAGTGGTTACTTTTC < 41bp 1 0.197178751829064 1 0.074657678604126 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222118 chr16:3222110 . . 0 13 hm5C_associated_SNPs_11302 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222119 + 3222099 3222139 41 GGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTCC GGTTCAAATCCTGGACGAGCCCTAGAAGTGGTTACTTTTCC < 41bp 1 0.0960316313146134 1 0.0868725776672363 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222119 chr16:3222110 . . 0 12 hm5C_associated_SNPs_11303 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222110 3222110 1 + C T rs556784427 3222120 + 3222100 3222140 41 GTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTCCC GTTCAAATCCTGGACGAGCCCTAGAAGTGGTTACTTTTCCC < 41bp 1 0.787683493713103 1 0.36816418170929 experiment 0.424633012573794 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222120 chr16:3222110 . . 0 11 hm5C_associated_SNPs_11304 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222096 + 3222076 3222116 41 CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTCGGGTGCGAGAGGTCCCGGGTTCAAATCCCAGACGA < 41bp 1 0.782411082544462 1 0.710251808166504 experiment 0.435177834911077 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222096 chr16:3222111 . . 0 36 hm5C_associated_SNPs_11305 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222103 + 3222083 3222123 41 GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAG GGTGCGAGAGGTCCCGGGTTCAAATCCCAGACGAGCCCTAG < 41bp 1 0.414288742769944 1 0.723427951335907 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222103 chr16:3222111 . . 0 29 hm5C_associated_SNPs_11306 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222108 + 3222088 3222128 41 GAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTG GAGAGGTCCCGGGTTCAAATCCCAGACGAGCCCTAGAAGTG < 41bp 1 0.284795199147308 1 0.713216364383698 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222108 chr16:3222111 . . 0 24 hm5C_associated_SNPs_11307 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222109 + 3222089 3222129 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGG AGAGGTCCCGGGTTCAAATCCCAGACGAGCCCTAGAAGTGG < 41bp 1 0.503195090889459 1 0.610735714435577 experiment 0.993609818221083 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222109 chr16:3222111 . . 0 23 hm5C_associated_SNPs_11308 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222110 + 3222090 3222130 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGT GAGGTCCCGGGTTCAAATCCCAGACGAGCCCTAGAAGTGGT < 41bp 1 0.291496719568083 1 0.553157448768616 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222110 chr16:3222111 . . 0 22 hm5C_associated_SNPs_11309 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222114 + 3222094 3222134 41 TCCCGGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACT TCCCGGGTTCAAATCCCAGACGAGCCCTAGAAGTGGTTACT < 41bp 1 0.185324842697745 1 0.420436084270477 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222114 chr16:3222111 . . 0 18 hm5C_associated_SNPs_11310 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222118 + 3222098 3222138 41 GGGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTC GGGTTCAAATCCCAGACGAGCCCTAGAAGTGGTTACTTTTC < 41bp 1 0.16971004312085 1 0.0467751324176788 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222118 chr16:3222111 . . 0 14 hm5C_associated_SNPs_11311 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222119 + 3222099 3222139 41 GGTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTCC GGTTCAAATCCCAGACGAGCCCTAGAAGTGGTTACTTTTCC < 41bp 1 0.0831607090646663 1 0.0584226548671722 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222119 chr16:3222111 . . 0 13 hm5C_associated_SNPs_11312 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3222111 3222111 1 + G A rs548045356 3222120 + 3222100 3222140 41 GTTCAAATCCCGGACGAGCCCTAGAAGTGGTTACTTTTCCC GTTCAAATCCCAGACGAGCCCTAGAAGTGGTTACTTTTCCC < 41bp 1 0.7587552053203 1 0.174814790487289 experiment 0.482489589359399 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3222120 chr16:3222111 . . 0 12 hm5C_associated_SNPs_11313 0 0 27 SSB POSTAR2 GSE95683,GSM2521599 chr16:3222093-3222147
64251 chr16 3225697 3225697 1 + G A rs150198758 3225693 + 3225673 3225713 41 AAGGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAG AAGGTAACGTTGGCGTGTCGCCCGACTAGCTCAGTCGGTAG < 41bp 1 0.703780666622392 1 0.535210907459259 experiment 0.592438666755215 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225693 chr16:3225697 . . 0 25 hm5C_associated_SNPs_11314 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225694 + 3225674 3225714 41 AGGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGA AGGTAACGTTGGCGTGTCGCCCGACTAGCTCAGTCGGTAGA < 41bp 1 0.134595661429714 1 0.244471520185471 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225694 chr16:3225697 . . 0 24 hm5C_associated_SNPs_11315 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225695 + 3225675 3225715 41 GGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAG GGTAACGTTGGCGTGTCGCCCGACTAGCTCAGTCGGTAGAG < 41bp 1 0.422549943681794 1 0.305906444787979 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225695 chr16:3225697 . . 0 23 hm5C_associated_SNPs_11316 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225698 + 3225678 3225718 41 AACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCAT AACGTTGGCGTGTCGCCCGACTAGCTCAGTCGGTAGAGCAT < 41bp 1 0.179219174850599 1 0.171834498643875 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225698 chr16:3225697 . . 0 20 hm5C_associated_SNPs_11317 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225702 + 3225682 3225722 41 TTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA TTGGCGTGTCGCCCGACTAGCTCAGTCGGTAGAGCATGAGA < 41bp 1 0.456728793361727 1 0.169415920972824 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225702 chr16:3225697 . . 0 16 hm5C_associated_SNPs_11318 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225704 + 3225684 3225724 41 GGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT GGCGTGTCGCCCGACTAGCTCAGTCGGTAGAGCATGAGACT < 41bp 1 0.201137598780889 1 0.332270443439484 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225704 chr16:3225697 . . 0 14 hm5C_associated_SNPs_11319 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225708 + 3225688 3225728 41 TGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA TGTCGCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTA < 41bp 1 0.693667788321662 1 0.426759243011475 experiment 0.612664423356677 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225708 chr16:3225697 . . 0 10 hm5C_associated_SNPs_11320 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225697 3225697 1 + G A rs150198758 3225716 + 3225696 3225736 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG < 41bp 1 0.628224861672174 1 0.180439710617065 experiment 0.743550276655653 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225716 chr16:3225697 . . 0 2 hm5C_associated_SNPs_11321 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:3225680-3225700
64251 chr16 3225705 3225705 1 + A C rs187375460 3225693 + 3225673 3225713 41 AAGGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAG AAGGTAACGTTGGCGTGTCGCCCGGCTAGCTCCGTCGGTAG < 41bp 1 0.639123974033527 1 0.327505767345428 experiment 0.721752051932946 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225693 chr16:3225705 . . 0 33 hm5C_associated_SNPs_11322 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225694 + 3225674 3225714 41 AGGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGA AGGTAACGTTGGCGTGTCGCCCGGCTAGCTCCGTCGGTAGA < 41bp 1 0.308105010540916 1 0.553477108478546 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225694 chr16:3225705 . . 0 32 hm5C_associated_SNPs_11323 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225695 + 3225675 3225715 41 GGTAACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAG GGTAACGTTGGCGTGTCGCCCGGCTAGCTCCGTCGGTAGAG < 41bp 1 0.554774605757619 1 0.425865560770035 experiment 0.890450788484762 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225695 chr16:3225705 . . 0 31 hm5C_associated_SNPs_11324 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225698 + 3225678 3225718 41 AACGTTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCAT AACGTTGGCGTGTCGCCCGGCTAGCTCCGTCGGTAGAGCAT < 41bp 1 0.172624353508949 1 0.202951818704605 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225698 chr16:3225705 . . 0 28 hm5C_associated_SNPs_11325 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225702 + 3225682 3225722 41 TTGGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGA TTGGCGTGTCGCCCGGCTAGCTCCGTCGGTAGAGCATGAGA < 41bp 1 0.54564844435806 1 0.323012471199036 experiment 0.908703111283879 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225702 chr16:3225705 . . 0 24 hm5C_associated_SNPs_11326 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225704 + 3225684 3225724 41 GGCGTGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT GGCGTGTCGCCCGGCTAGCTCCGTCGGTAGAGCATGAGACT < 41bp 1 0.0997673887061249 1 0.388149529695511 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225704 chr16:3225705 . . 0 22 hm5C_associated_SNPs_11327 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225708 + 3225688 3225728 41 TGTCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTA TGTCGCCCGGCTAGCTCCGTCGGTAGAGCATGAGACTCTTA < 41bp 1 0.664251694737399 1 0.585226655006409 experiment 0.671496610525202 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225708 chr16:3225705 . . 0 18 hm5C_associated_SNPs_11328 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225716 + 3225696 3225736 41 GGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG GGCTAGCTCCGTCGGTAGAGCATGAGACTCTTAATCTCAGG < 41bp 1 0.673625821564603 1 0.354216992855072 experiment 0.652748356870793 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225716 chr16:3225705 . . 0 10 hm5C_associated_SNPs_11329 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225723 + 3225703 3225743 41 TCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG TCCGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG < 41bp 1 0.110731317956831 1 0.0184809267520905 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225723 chr16:3225705 . . 0 3 hm5C_associated_SNPs_11330 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3225705 3225705 1 + A C rs187375460 3225725 + 3225705 3225745 41 AGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT CGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.333250428659951 1 0.167083561420441 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3225725 chr16:3225705 . . 0 1 hm5C_associated_SNPs_11331 0 0 16 SSB POSTAR2 GSE95683,GSM2521599 chr16:3225683-3225723
64251 chr16 3239669 3239669 1 + G A rs577464701 3239681 + 3239661 3239701 41 CGCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.785781723755495 1 0.513875722885132 experiment 0.42843655248901 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3239681 chr16:3239669 . . 0 9 hm5C_associated_SNPs_11332 0 0 9 FBL POSTAR2 GSE43666,GSM1067865 chr16:3239660-3239680
64251 chr16 3239696 3239696 1 + G A rs542032816 3239703 + 3239683 3239723 41 GGGTTCAAATCCCGGACGAGCCCGGCTTTTGGTGCAGGGTA GGGTTCAAATCCCAGACGAGCCCGGCTTTTGGTGCAGGGTA < 41bp 1 0.359467874733409 1 0.117489784955978 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3239703 chr16:3239696 . . 0 14 hm5C_associated_SNPs_11333 0 0 33 SSB POSTAR2 GSE95683,GSM2521599 chr16:3239660-3239700
64251 chr16 3239696 3239696 1 + G A rs542032816 3239704 + 3239684 3239724 41 GGTTCAAATCCCGGACGAGCCCGGCTTTTGGTGCAGGGTAA GGTTCAAATCCCAGACGAGCCCGGCTTTTGGTGCAGGGTAA < 41bp 1 0.392953421295532 1 0.334304988384247 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3239704 chr16:3239696 . . 0 13 hm5C_associated_SNPs_11334 0 0 33 SSB POSTAR2 GSE95683,GSM2521599 chr16:3239660-3239700
64251 chr16 3239696 3239696 1 + G A rs542032816 3239705 + 3239685 3239725 41 GTTCAAATCCCGGACGAGCCCGGCTTTTGGTGCAGGGTAAA GTTCAAATCCCAGACGAGCCCGGCTTTTGGTGCAGGGTAAA < 41bp 1 0.568503277094464 1 0.485454112291336 experiment 0.862993445811072 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3239705 chr16:3239696 . . 0 12 hm5C_associated_SNPs_11335 0 0 33 SSB POSTAR2 GSE95683,GSM2521599 chr16:3239660-3239700
64251 chr16 3241503 3241503 1 + C A rs117373271 3241504 + 3241484 3241524 41 AAAACGTTCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAG AAAACGTTCCCAGGGAAGCACGGCTAGCTCAGTCGGTAGAG < 41bp 1 0.482731277227171 1 0.356812626123428 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241504 chr16:3241503 . . 0 20 hm5C_associated_SNPs_11336 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3241503 3241503 1 + C A rs117373271 3241507 + 3241487 3241527 41 ACGTTCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCAT ACGTTCCCAGGGAAGCACGGCTAGCTCAGTCGGTAGAGCAT < 41bp 1 0.198292087125272 1 0.162020117044449 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241507 chr16:3241503 . . 0 17 hm5C_associated_SNPs_11337 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3241503 3241503 1 + C A rs117373271 3241511 + 3241491 3241531 41 TCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGA TCCCAGGGAAGCACGGCTAGCTCAGTCGGTAGAGCATGGGA < 41bp 1 0.590667068126041 1 0.16831386089325 experiment 0.818665863747918 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241511 chr16:3241503 . . 0 13 hm5C_associated_SNPs_11338 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3241503 3241503 1 + C A rs117373271 3241513 + 3241493 3241533 41 CCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACT CCAGGGAAGCACGGCTAGCTCAGTCGGTAGAGCATGGGACT < 41bp 1 0.478550301810814 1 0.290076911449432 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241513 chr16:3241503 . . 0 11 hm5C_associated_SNPs_11339 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3241503 3241503 1 + C A rs117373271 3241517 + 3241497 3241537 41 GGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTA GGAAGCACGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTA < 41bp 1 0.758039011197558 1 0.54387766122818 experiment 0.483921977604884 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241517 chr16:3241503 . . 0 7 hm5C_associated_SNPs_11340 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3241480-3241520
64251 chr16 3241527 3241527 1 + T G rs139156010 3241507 + 3241487 3241527 41 ACGTTCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCAT ACGTTCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCAG < 41bp 1 0.198529442957703 1 0.139939218759537 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241507 chr16:3241527 . . 0 41 hm5C_associated_SNPs_11341 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241511 + 3241491 3241531 41 TCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGA TCCCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCAGGGGA < 41bp 1 0.675519914574463 1 0.222015738487244 experiment 0.648960170851073 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241511 chr16:3241527 . . 0 37 hm5C_associated_SNPs_11342 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241513 + 3241493 3241533 41 CCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACT CCAGGGAAGCCCGGCTAGCTCAGTCGGTAGAGCAGGGGACT < 41bp 1 0.456135756634328 1 0.337490677833557 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241513 chr16:3241527 . . 0 35 hm5C_associated_SNPs_11343 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241517 + 3241497 3241537 41 GGAAGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTA GGAAGCCCGGCTAGCTCAGTCGGTAGAGCAGGGGACTCTTA < 41bp 1 0.749521799749707 1 0.780387938022614 experiment 0.500956400500585 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241517 chr16:3241527 . . 0 31 hm5C_associated_SNPs_11344 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241532 + 3241512 3241552 41 TCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGG TCAGTCGGTAGAGCAGGGGACTCTTAATCTCAGGGTCGTGG < 41bp 1 0.0917178887461765 1 0.0265021026134491 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241532 chr16:3241527 . . 0 16 hm5C_associated_SNPs_11345 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241534 + 3241514 3241554 41 AGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGT AGTCGGTAGAGCAGGGGACTCTTAATCTCAGGGTCGTGGGT < 41bp 1 0.445334264827843 1 0.374183475971222 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241534 chr16:3241527 . . 0 14 hm5C_associated_SNPs_11346 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241527 3241527 1 + T G rs139156010 3241540 + 3241520 3241560 41 TAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC TAGAGCAGGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC < 41bp 1 0.700820901734633 1 0.849326729774475 experiment 0.598358196530735 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241540 chr16:3241527 . . 0 8 hm5C_associated_SNPs_11347 0 0 65 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241532 + 3241512 3241552 41 TCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGG TCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGATCGTGG < 41bp 1 0.0743782628847031 1 0.0187948048114777 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241532 chr16:3241546 . . 0 35 hm5C_associated_SNPs_11348 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241534 + 3241514 3241554 41 AGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGT AGTCGGTAGAGCATGGGACTCTTAATCTCAGGATCGTGGGT < 41bp 1 0.393995558543285 1 0.230729609727859 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241534 chr16:3241546 . . 0 33 hm5C_associated_SNPs_11349 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241540 + 3241520 3241560 41 TAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC TAGAGCATGGGACTCTTAATCTCAGGATCGTGGGTTCGAGC < 41bp 1 0.674434562556461 1 0.68036937713623 experiment 0.651130874887078 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241540 chr16:3241546 . . 0 27 hm5C_associated_SNPs_11350 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241548 + 3241528 3241568 41 GGGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACGTT GGGACTCTTAATCTCAGGATCGTGGGTTCGAGCCCCACGTT < 41bp 1 0.656430728359671 1 0.612864434719086 experiment 0.687138543280658 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241548 chr16:3241546 . . 0 19 hm5C_associated_SNPs_11351 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241556 + 3241536 3241576 41 TAATCTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGACT TAATCTCAGGATCGTGGGTTCGAGCCCCACGTTGGGCGACT < 41bp 1 0.362335865144217 1 0.301983296871185 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241556 chr16:3241546 . . 0 11 hm5C_associated_SNPs_11352 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241560 + 3241540 3241580 41 CTCAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGACTTGTT CTCAGGATCGTGGGTTCGAGCCCCACGTTGGGCGACTTGTT < 41bp 1 0.338525160687841 1 0.104791522026062 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241560 chr16:3241546 . . 0 7 hm5C_associated_SNPs_11353 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241546 3241546 1 + G A rs540270887 3241562 + 3241542 3241582 41 CAGGGTCGTGGGTTCGAGCCCCACGTTGGGCGACTTGTTTT CAGGATCGTGGGTTCGAGCCCCACGTTGGGCGACTTGTTTT < 41bp 1 0.343521048576582 1 0.12390074133873 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241562 chr16:3241546 . . 0 5 hm5C_associated_SNPs_11354 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:3241480-3241560
64251 chr16 3241999 3241999 1 + T C rs2238394 3241991 + 3241971 3242011 41 TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGA TAAAGGGCCTGCTGCTGTGGCTCGTTGGCCTAGGGGTATGA < 41bp 1 0.433796191631254 1 0.115485489368439 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241991 chr16:3241999 . . 0 29 hm5C_associated_SNPs_11355 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3241999 3241999 1 + T C rs2238394 3241993 + 3241973 3242013 41 AAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATT AAGGGCCTGCTGCTGTGGCTCGTTGGCCTAGGGGTATGATT < 41bp 1 0.146390072723907 1 0.156888008117676 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241993 chr16:3241999 . . 0 27 hm5C_associated_SNPs_11356 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3241999 3241999 1 + T C rs2238394 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGCCTAGGGGTATGATTCTCGCTT < 41bp 1 0.623126621464248 1 0.734892070293427 experiment 0.753746757071503 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3241999 . . 0 20 hm5C_associated_SNPs_11357 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3241999 3241999 1 + T C rs2238394 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGCCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT < 41bp 1 0.720687135295929 1 0.802061915397644 experiment 0.558625729408142 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3241999 . . 0 6 hm5C_associated_SNPs_11358 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3241999 3241999 1 + T C rs2238394 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGCCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC < 41bp 1 0.314309161232582 1 0.160110652446747 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3241999 . . 0 4 hm5C_associated_SNPs_11359 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3241999 3241999 1 + T C rs2238394 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GCCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG < 41bp 1 0.428758421823165 1 0.0553041994571686 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3241999 . . 0 2 hm5C_associated_SNPs_11360 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3241991 + 3241971 3242011 41 TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGA TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCAAGGGGTATGA < 41bp 1 0.500791390166715 1 0.116205036640167 experiment 0.998417219666569 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241991 chr16:3242001 . . 0 31 hm5C_associated_SNPs_11361 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3241993 + 3241973 3242013 41 AAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATT AAGGGCCTGCTGCTGTGGCTCGTTGGTCAAGGGGTATGATT < 41bp 1 0.185577265274838 1 0.109049111604691 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241993 chr16:3242001 . . 0 29 hm5C_associated_SNPs_11362 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGTCAAGGGGTATGATTCTCGCTT < 41bp 1 0.713025719523521 1 0.885825037956238 experiment 0.573948560952959 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3242001 . . 0 22 hm5C_associated_SNPs_11363 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCAAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT < 41bp 1 0.723372312691855 1 0.763054490089417 experiment 0.55325537461629 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242001 . . 0 8 hm5C_associated_SNPs_11364 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCAAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC < 41bp 1 0.329454313588183 1 0.0982479453086853 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242001 . . 0 6 hm5C_associated_SNPs_11365 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242001 3242001 1 + T A rs569222812 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCAAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG < 41bp 1 0.401538522051654 1 0.0742889046669006 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242001 . . 0 4 hm5C_associated_SNPs_11366 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3241991 + 3241971 3242011 41 TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGA TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTCGGGGTATGA < 41bp 1 0.414085378836213 1 0.138085573911667 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241991 chr16:3242002 . . 0 32 hm5C_associated_SNPs_11367 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3241993 + 3241973 3242013 41 AAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATT AAGGGCCTGCTGCTGTGGCTCGTTGGTCTCGGGGTATGATT < 41bp 1 0.19628934822882 1 0.0904370844364166 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241993 chr16:3242002 . . 0 30 hm5C_associated_SNPs_11368 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGTCTCGGGGTATGATTCTCGCTT < 41bp 1 0.703947093162246 1 0.817656636238098 experiment 0.592105813675509 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3242002 . . 0 23 hm5C_associated_SNPs_11369 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTCGGGGTATGATTCTCGCTTAGGATGCGAGAGGT < 41bp 1 0.716276686619724 1 0.873654961585999 experiment 0.567446626760551 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242002 . . 0 9 hm5C_associated_SNPs_11370 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTCGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC < 41bp 1 0.262359684729892 1 0.204596072435379 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242002 . . 0 7 hm5C_associated_SNPs_11371 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242002 3242002 1 + A C rs111246815 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTCGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG < 41bp 1 0.394173450277456 1 0.0840139985084534 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242002 . . 0 5 hm5C_associated_SNPs_11372 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3241991 + 3241971 3242011 41 TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGA TAAAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATCA < 41bp 1 0.425333064959339 1 0.16801854968071 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241991 chr16:3242010 . . 0 40 hm5C_associated_SNPs_11373 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3241993 + 3241973 3242013 41 AAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATT AAGGGCCTGCTGCTGTGGCTCGTTGGTCTAGGGGTATCATT < 41bp 1 0.192828785638471 1 0.240616738796234 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3241993 chr16:3242010 . . 0 38 hm5C_associated_SNPs_11374 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGTCTAGGGGTATCATTCTCGCTT < 41bp 1 0.677732270145204 1 0.662283539772034 experiment 0.644535459709591 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3242010 . . 0 31 hm5C_associated_SNPs_11375 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATCATTCTCGCTTAGGATGCGAGAGGT < 41bp 1 0.714741599058001 1 0.833331823348999 experiment 0.570516801883999 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242010 . . 0 17 hm5C_associated_SNPs_11376 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATCATTCTCGCTTAGGATGCGAGAGGTCC < 41bp 1 0.318744884552119 1 0.181608587503433 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242010 . . 0 15 hm5C_associated_SNPs_11377 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATCATTCTCGCTTAGGATGCGAGAGGTCCCG < 41bp 1 0.373230521827515 1 0.0653319656848907 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242010 . . 0 13 hm5C_associated_SNPs_11378 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242010 3242010 1 + G C rs111264639 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATCATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT < 41bp 1 0.765729712515134 1 0.529190957546234 experiment 0.468540574969732 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242010 . . 0 4 hm5C_associated_SNPs_11379 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242014 3242014 1 + C G rs533908867 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTGTCGCTT < 41bp 1 0.639626888603619 1 0.705784797668457 experiment 0.720746222792761 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3242014 . . 0 35 hm5C_associated_SNPs_11380 0 0 29 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242014 3242014 1 + C G rs533908867 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTGTCGCTTAGGATGCGAGAGGTCC < 41bp 1 0.268669720116493 1 0.112295269966125 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242014 . . 0 19 hm5C_associated_SNPs_11381 0 0 29 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242014 3242014 1 + C G rs533908867 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTGTCGCTTAGGATGCGAGAGGTCCCG < 41bp 1 0.402037887884811 1 0.0768651068210602 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242014 . . 0 17 hm5C_associated_SNPs_11382 0 0 29 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242000 + 3241980 3242020 41 TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCGCTT TGCTGCTGTGGCTCGTTGGTCTAGGGGTATGATTCTCACTT < 41bp 1 0.653302984110461 1 0.729753971099854 experiment 0.693394031779079 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242000 chr16:3242017 . . 0 38 hm5C_associated_SNPs_11383 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCACTTAGGATGCGAGAGGT < 41bp 1 0.464458439019542 1 0.628574311733246 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242017 . . 0 24 hm5C_associated_SNPs_11384 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCACTTAGGATGCGAGAGGTCC < 41bp 1 0.257317786890691 1 0.122114568948746 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242017 . . 0 22 hm5C_associated_SNPs_11385 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCACTTAGGATGCGAGAGGTCCCG < 41bp 1 0.41470136661298 1 0.0532015562057495 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242017 . . 0 20 hm5C_associated_SNPs_11386 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCACTTAGGATGCGAGAGGTCCCGGGTTCAAAT < 41bp 1 0.747221550660305 1 0.5069659948349 experiment 0.50555689867939 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242017 . . 0 11 hm5C_associated_SNPs_11387 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCACTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.752173120614077 1 0.420679450035095 experiment 0.495653758771845 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242017 . . 0 3 hm5C_associated_SNPs_11388 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242017 3242017 1 + G A rs188219465 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CACTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.704758012588994 1 0.539103806018829 experiment 0.590483974822011 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242017 . . 0 2 hm5C_associated_SNPs_11389 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3241973-3242018
64251 chr16 3242024 3242024 1 + A G rs11863608 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGT < 41bp 1 0.67661134365418 1 0.752784013748169 experiment 0.646777312691641 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242024 . . 0 31 hm5C_associated_SNPs_11390 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGTCC < 41bp 1 0.34145851422547 1 0.200170159339905 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242024 . . 0 29 hm5C_associated_SNPs_11391 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTAGGGTGCGAGAGGTCCCG < 41bp 1 0.396910072313639 1 0.0802971124649048 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242024 . . 0 27 hm5C_associated_SNPs_11392 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGGTGCGAGAGGTCCCGGGTTCAAAT < 41bp 1 0.699658525834976 1 0.486161142587662 experiment 0.600682948330048 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242024 . . 0 18 hm5C_associated_SNPs_11393 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.792605603721876 1 0.699168622493744 experiment 0.414788792556247 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242024 . . 0 10 hm5C_associated_SNPs_11394 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.775622817177768 1 0.692498445510864 experiment 0.448754365644465 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242024 . . 0 9 hm5C_associated_SNPs_11395 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242024 3242024 1 + A G rs11863608 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GGTGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC < 41bp 1 0.478639896751393 1 0.505008518695831 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242024 . . 0 2 hm5C_associated_SNPs_11396 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCGCTTAGGATACGAGAGGT < 41bp 1 0.719157529166859 1 0.768969774246216 experiment 0.561684941666283 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242026 . . 0 33 hm5C_associated_SNPs_11397 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTAGGATACGAGAGGTCC < 41bp 1 0.347317805865401 1 0.27797794342041 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242026 . . 0 31 hm5C_associated_SNPs_11398 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTAGGATACGAGAGGTCCCG < 41bp 1 0.376576241016517 1 0.0834580361843109 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242026 . . 0 29 hm5C_associated_SNPs_11399 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGATACGAGAGGTCCCGGGTTCAAAT < 41bp 1 0.769768009092063 1 0.450748145580292 experiment 0.460463981815874 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242026 . . 0 20 hm5C_associated_SNPs_11400 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATACGAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.709069998298936 1 0.364273011684418 experiment 0.581860003402128 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242026 . . 0 12 hm5C_associated_SNPs_11401 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATACGAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.711466035524803 1 0.444655537605286 experiment 0.577067928950395 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242026 . . 0 11 hm5C_associated_SNPs_11402 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242037 + 3242017 3242057 41 GCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAG GCTTAGGATACGAGAGGTCCCGGGTTCAAATCCCGGACGAG < 41bp 1 0.787513915944203 1 0.748181283473969 experiment 0.424972168111595 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242037 chr16:3242026 . . 0 10 hm5C_associated_SNPs_11403 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242026 3242026 1 + G A rs183688971 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATACGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC < 41bp 1 0.432059324970903 1 0.560364425182343 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242026 . . 0 4 hm5C_associated_SNPs_11404 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCAAGAGGT < 41bp 1 0.696364532079317 1 0.793106555938721 experiment 0.607270935841366 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242028 . . 0 35 hm5C_associated_SNPs_11405 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTAGGATGCAAGAGGTCC < 41bp 1 0.321136870736137 1 0.17797189950943 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242028 . . 0 33 hm5C_associated_SNPs_11406 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTAGGATGCAAGAGGTCCCG < 41bp 1 0.454776737825294 1 0.0641361176967621 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242028 . . 0 31 hm5C_associated_SNPs_11407 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGATGCAAGAGGTCCCGGGTTCAAAT < 41bp 1 0.711484457240079 1 0.499736607074738 experiment 0.577031085519842 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242028 . . 0 22 hm5C_associated_SNPs_11408 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATGCAAGAGGTCCCGGGTTCAAATCCCGGACG < 41bp 1 0.700003754402815 1 0.267742276191711 experiment 0.59999249119437 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242028 . . 0 14 hm5C_associated_SNPs_11409 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCAAGAGGTCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.654517630554158 1 0.441988170146942 experiment 0.690964738891684 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242028 . . 0 13 hm5C_associated_SNPs_11410 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242037 + 3242017 3242057 41 GCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAG GCTTAGGATGCAAGAGGTCCCGGGTTCAAATCCCGGACGAG < 41bp 1 0.780580189443851 1 0.700578629970551 experiment 0.438839621112297 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242037 chr16:3242028 . . 0 12 hm5C_associated_SNPs_11411 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242028 3242028 1 + G A rs576366177 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCAAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC < 41bp 1 0.429733793515884 1 0.468274474143982 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242028 . . 0 6 hm5C_associated_SNPs_11412 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242014 + 3241994 3242034 41 GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGT GTTGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGC < 41bp 1 0.748823064690486 1 0.782170057296753 experiment 0.502353870619028 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242014 chr16:3242034 . . 0 41 hm5C_associated_SNPs_11413 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242016 + 3241996 3242036 41 TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCC TGGTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGCCC < 41bp 1 0.326902976465075 1 0.274855941534042 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242016 chr16:3242034 . . 0 39 hm5C_associated_SNPs_11414 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242018 + 3241998 3242038 41 GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGTCCCG GTCTAGGGGTATGATTCTCGCTTAGGATGCGAGAGGCCCCG < 41bp 1 0.450037703370466 1 0.0746983289718628 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242018 chr16:3242034 . . 0 37 hm5C_associated_SNPs_11415 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242027 + 3242007 3242047 41 TATGATTCTCGCTTAGGATGCGAGAGGTCCCGGGTTCAAAT TATGATTCTCGCTTAGGATGCGAGAGGCCCCGGGTTCAAAT < 41bp 1 0.781687618780935 1 0.574174344539642 experiment 0.436624762438131 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242027 chr16:3242034 . . 0 28 hm5C_associated_SNPs_11416 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATGCGAGAGGCCCCGGGTTCAAATCCCGGACG < 41bp 1 0.714682623042618 1 0.353681206703186 experiment 0.570634753914765 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242034 . . 0 20 hm5C_associated_SNPs_11417 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCGAGAGGCCCCGGGTTCAAATCCCGGACGA < 41bp 1 0.741570761199802 1 0.523238658905029 experiment 0.516858477600395 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242034 . . 0 19 hm5C_associated_SNPs_11418 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242037 + 3242017 3242057 41 GCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAG GCTTAGGATGCGAGAGGCCCCGGGTTCAAATCCCGGACGAG < 41bp 1 0.763646398059145 1 0.738304376602173 experiment 0.47270720388171 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242037 chr16:3242034 . . 0 18 hm5C_associated_SNPs_11419 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCGAGAGGCCCCGGGTTCAAATCCCGGACGAGCCCCTC < 41bp 1 0.488272358072283 1 0.54332435131073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242034 . . 0 12 hm5C_associated_SNPs_11420 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242049 + 3242029 3242069 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTA AGAGGCCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTA < 41bp 1 0.746906937210205 1 0.846473693847656 experiment 0.506186125579591 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242049 chr16:3242034 . . 0 6 hm5C_associated_SNPs_11421 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242050 + 3242030 3242070 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT GAGGCCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT < 41bp 1 0.515416260979888 1 0.400961995124817 experiment 0.969167478040224 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242050 chr16:3242034 . . 0 5 hm5C_associated_SNPs_11422 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242034 3242034 1 + T C rs565161042 3242054 + 3242034 3242074 41 TCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT CCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT < 41bp 1 0.177138675234036 1 0.199241876602173 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242054 chr16:3242034 . . 0 1 hm5C_associated_SNPs_11423 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCACGGACG < 41bp 1 0.704122387009586 1 0.495877087116241 experiment 0.591755225980827 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242049 . . 0 35 hm5C_associated_SNPs_11424 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCACGGACGA < 41bp 1 0.685330586708554 1 0.527635753154755 experiment 0.629338826582891 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242049 . . 0 34 hm5C_associated_SNPs_11425 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCGAGAGGTCCCGGGTTCAAATCACGGACGAGCCCCTC < 41bp 1 0.47436125651537 1 0.458991676568985 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242049 . . 0 27 hm5C_associated_SNPs_11426 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242050 + 3242030 3242070 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT GAGGTCCCGGGTTCAAATCACGGACGAGCCCCTCTTCTTAT < 41bp 1 0.485194872549174 1 0.381543338298798 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242050 chr16:3242049 . . 0 20 hm5C_associated_SNPs_11427 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242054 + 3242034 3242074 41 TCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT TCCCGGGTTCAAATCACGGACGAGCCCCTCTTCTTATTTTT < 41bp 1 0.193143307921339 1 0.170429766178131 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242054 chr16:3242049 . . 0 16 hm5C_associated_SNPs_11428 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242058 + 3242038 3242078 41 GGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGA GGGTTCAAATCACGGACGAGCCCCTCTTCTTATTTTTGAGA < 41bp 1 0.071910837387413 1 0.0506107807159424 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242058 chr16:3242049 . . 0 12 hm5C_associated_SNPs_11429 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242059 + 3242039 3242079 41 GGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGAC GGTTCAAATCACGGACGAGCCCCTCTTCTTATTTTTGAGAC < 41bp 1 0.109535214324947 1 0.0544704794883728 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242059 chr16:3242049 . . 0 11 hm5C_associated_SNPs_11430 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242049 3242049 1 + C A rs192567340 3242060 + 3242040 3242080 41 GTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGACA GTTCAAATCACGGACGAGCCCCTCTTCTTATTTTTGAGACA < 41bp 1 0.0704964767829299 1 0.0432069003582001 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242060 chr16:3242049 . . 0 10 hm5C_associated_SNPs_11431 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCAGACG < 41bp 1 0.728184860190393 1 0.326680958271027 experiment 0.543630279619213 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242051 . . 0 37 hm5C_associated_SNPs_11432 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCAGACGA < 41bp 1 0.710639866169082 1 0.491191625595093 experiment 0.578720267661836 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242051 . . 0 36 hm5C_associated_SNPs_11433 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCGAGAGGTCCCGGGTTCAAATCCCAGACGAGCCCCTC < 41bp 1 0.410925651831034 1 0.661241769790649 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242051 . . 0 29 hm5C_associated_SNPs_11434 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242049 + 3242029 3242069 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTA AGAGGTCCCGGGTTCAAATCCCAGACGAGCCCCTCTTCTTA < 41bp 1 0.597046813308974 1 0.618941366672516 experiment 0.805906373382051 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242049 chr16:3242051 . . 0 23 hm5C_associated_SNPs_11435 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242050 + 3242030 3242070 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT GAGGTCCCGGGTTCAAATCCCAGACGAGCCCCTCTTCTTAT < 41bp 1 0.421855888389626 1 0.353192031383514 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242050 chr16:3242051 . . 0 22 hm5C_associated_SNPs_11436 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242054 + 3242034 3242074 41 TCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT TCCCGGGTTCAAATCCCAGACGAGCCCCTCTTCTTATTTTT < 41bp 1 0.221093731722474 1 0.199695587158203 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242054 chr16:3242051 . . 0 18 hm5C_associated_SNPs_11437 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242058 + 3242038 3242078 41 GGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGA GGGTTCAAATCCCAGACGAGCCCCTCTTCTTATTTTTGAGA < 41bp 1 0.0611786044918368 1 0.026581197977066 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242058 chr16:3242051 . . 0 14 hm5C_associated_SNPs_11438 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242059 + 3242039 3242079 41 GGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGAC GGTTCAAATCCCAGACGAGCCCCTCTTCTTATTTTTGAGAC < 41bp 1 0.0816775125339736 1 0.055140882730484 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242059 chr16:3242051 . . 0 13 hm5C_associated_SNPs_11439 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242051 3242051 1 + G A rs113939832 3242060 + 3242040 3242080 41 GTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGACA GTTCAAATCCCAGACGAGCCCCTCTTCTTATTTTTGAGACA < 41bp 1 0.0613294553641338 1 0.0392926037311554 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242060 chr16:3242051 . . 0 12 hm5C_associated_SNPs_11440 0 0 46 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242035 + 3242015 3242055 41 TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACG TCGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGAGG < 41bp 1 0.746592335443669 1 0.596511125564575 experiment 0.506815329112662 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242035 chr16:3242054 . . 0 40 hm5C_associated_SNPs_11441 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242036 + 3242016 3242056 41 CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGACGA CGCTTAGGATGCGAGAGGTCCCGGGTTCAAATCCCGGAGGA < 41bp 1 0.697023229358178 1 0.618870317935944 experiment 0.605953541283643 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242036 chr16:3242054 . . 0 39 hm5C_associated_SNPs_11442 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCGAGAGGTCCCGGGTTCAAATCCCGGAGGAGCCCCTC < 41bp 1 0.461913055951507 1 0.570530414581299 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242054 . . 0 32 hm5C_associated_SNPs_11443 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242050 + 3242030 3242070 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT GAGGTCCCGGGTTCAAATCCCGGAGGAGCCCCTCTTCTTAT < 41bp 1 0.773714760422264 1 0.731112837791443 experiment 0.452570479155471 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242050 chr16:3242054 . . 0 25 hm5C_associated_SNPs_11444 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242058 + 3242038 3242078 41 GGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGA GGGTTCAAATCCCGGAGGAGCCCCTCTTCTTATTTTTGAGA < 41bp 1 0.0798324891398707 1 0.0647799074649811 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242058 chr16:3242054 . . 0 17 hm5C_associated_SNPs_11445 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242059 + 3242039 3242079 41 GGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGAC GGTTCAAATCCCGGAGGAGCCCCTCTTCTTATTTTTGAGAC < 41bp 1 0.130366451062135 1 0.0782904624938965 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242059 chr16:3242054 . . 0 16 hm5C_associated_SNPs_11446 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242054 3242054 1 + C G rs570026290 3242060 + 3242040 3242080 41 GTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGACA GTTCAAATCCCGGAGGAGCCCCTCTTCTTATTTTTGAGACA < 41bp 1 0.0752022675877303 1 0.0951448082923889 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242060 chr16:3242054 . . 0 15 hm5C_associated_SNPs_11447 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242043 + 3242023 3242063 41 GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTC GATGCGAGAGGTCCCGGGTTCAAATCCCGGACGAACCCCTC < 41bp 1 0.417045298442302 1 0.476474583148956 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242043 chr16:3242057 . . 0 35 hm5C_associated_SNPs_11448 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242049 + 3242029 3242069 41 AGAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTA AGAGGTCCCGGGTTCAAATCCCGGACGAACCCCTCTTCTTA < 41bp 1 0.704156410114568 1 0.879435539245605 experiment 0.591687179770865 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242049 chr16:3242057 . . 0 29 hm5C_associated_SNPs_11449 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242050 + 3242030 3242070 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTAT GAGGTCCCGGGTTCAAATCCCGGACGAACCCCTCTTCTTAT < 41bp 1 0.471174466446033 1 0.464854866266251 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242050 chr16:3242057 . . 0 28 hm5C_associated_SNPs_11450 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242054 + 3242034 3242074 41 TCCCGGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTT TCCCGGGTTCAAATCCCGGACGAACCCCTCTTCTTATTTTT < 41bp 1 0.0694428197619334 1 0.0720346570014954 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242054 chr16:3242057 . . 0 24 hm5C_associated_SNPs_11451 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242058 + 3242038 3242078 41 GGGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGA GGGTTCAAATCCCGGACGAACCCCTCTTCTTATTTTTGAGA < 41bp 1 0.0851600689177248 1 0.0499864518642426 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242058 chr16:3242057 . . 0 20 hm5C_associated_SNPs_11452 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242059 + 3242039 3242079 41 GGTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGAC GGTTCAAATCCCGGACGAACCCCTCTTCTTATTTTTGAGAC < 41bp 1 0.139788831266465 1 0.143011450767517 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242059 chr16:3242057 . . 0 19 hm5C_associated_SNPs_11453 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3242057 3242057 1 + G A rs115212815 3242060 + 3242040 3242080 41 GTTCAAATCCCGGACGAGCCCCTCTTCTTATTTTTGAGACA GTTCAAATCCCGGACGAACCCCTCTTCTTATTTTTGAGACA < 41bp 1 0.0997464364920755 1 0.111063241958618 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target CASP16P;OR1F1 ENSG00000262668 ncRNA_intronic Human antisense chr16:3242060 chr16:3242057 . . 0 18 hm5C_associated_SNPs_11454 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:3241974-3242068
64251 chr16 3358419 3358419 1 + C G rs553304424 3358402 + 3358382 3358422 41 GTACCAATTGGGTGTCTTAACACAGGAGCAGAACTTCCTAG GTACCAATTGGGTGTCTTAACACAGGAGCAGAACTTCGTAG < 41bp 1 0.703471937441829 1 0.50117951631546 experiment 0.593056125116343 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF75A ENSG00000162086 intronic Human protein_coding chr16:3358402 chr16:3358419 . . 0 38 hm5C_associated_SNPs_11456 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:3358398-3358435
64251 chr16 3358419 3358419 1 + C G rs553304424 3358410 + 3358390 3358430 41 TGGGTGTCTTAACACAGGAGCAGAACTTCCTAGAGCAGAAT TGGGTGTCTTAACACAGGAGCAGAACTTCGTAGAGCAGAAT < 41bp 1 0.254806266948084 1 0.425672262907028 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF75A ENSG00000162086 intronic Human protein_coding chr16:3358410 chr16:3358419 . . 0 30 hm5C_associated_SNPs_11457 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:3358398-3358435
64251 chr16 3536718 3536718 1 + G A rs181363345 3536723 + 3536703 3536743 41 GGCTGCCTGCCTGCCGGGCCCAGCTCAGCGCCCTCTCCACT GGCTGCCTGCCTGCCAGGCCCAGCTCAGCGCCCTCTCCACT < 41bp 1 0.623959309360481 1 0.0336658656597137 experiment 0.752081381279038 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3536723 chr16:3536718 . . 0 16 hm5C_associated_SNPs_11458 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:3536703-3536730
64251 chr16 3536729 3536729 1 + A T rs146006482 3536723 + 3536703 3536743 41 GGCTGCCTGCCTGCCGGGCCCAGCTCAGCGCCCTCTCCACT GGCTGCCTGCCTGCCGGGCCCAGCTCTGCGCCCTCTCCACT < 41bp 1 0.660969684927259 1 0.0291978418827057 experiment 0.678060630145481 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3536723 chr16:3536729 . . 0 27 hm5C_associated_SNPs_11459 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:3536703-3536730
64251 chr16 3707257 3707257 1 + C A rs148373909 3707253 + 3707233 3707273 41 AGACCCTCCCAGTGGTCATCCATCCGCCTGTGGACAAGCCC AGACCCTCCCAGTGGTCATCCATCAGCCTGTGGACAAGCCC < 41bp 1 0.503594809690394 1 0.0612652003765106 experiment 0.992810380619213 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707253 chr16:3707257 nonsynonymous SNV 0.396 4 25 hm5C_associated_SNPs_11460 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:3707225-3707258
64251 chr16 3707262 3707262 1 + G A rs8176920 3707253 + 3707233 3707273 41 AGACCCTCCCAGTGGTCATCCATCCGCCTGTGGACAAGCCC AGACCCTCCCAGTGGTCATCCATCCGCCTATGGACAAGCCC < 41bp 1 0.149521018042497 1 0.114675521850586 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707253 chr16:3707262 synonymous SNV . 0 30 hm5C_associated_SNPs_11461 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:3707247-3707283
64251 chr16 3707763 3707763 1 + C A rs201975812 3707766 + 3707746 3707786 41 CGAGGCGCCGTTGTTCCCGACTCGGCTCTTCCCTTTAACTT CGAGGCGCCGTTGTTCCAGACTCGGCTCTTCCCTTTAACTT < 41bp 1 0.714897357428565 1 0.370507657527924 experiment 0.57020528514287 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707766 chr16:3707763 synonymous SNV . 0 18 hm5C_associated_SNPs_11463 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3707760-3707789
64251 chr16 4388399 4388399 1 + C G rs147214646 4388413 + 4388393 4388433 41 CTCCTTCTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCC CTCCTTGTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCC < 41bp 1 0.229187571237373 1 0.0496428906917572 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control GLIS2 ENSG00000126603 UTR3 Human protein_coding chr16:4388413 chr16:4388399 . . 0 7 hm5C_associated_SNPs_11464 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4388375-4388437
64251 chr16 4388399 4388399 1 + C G rs147214646 4388414 + 4388394 4388434 41 TCCTTCTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCCT TCCTTGTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCCT < 41bp 1 0.591736298322748 1 0.0369236171245575 experiment 0.816527403354503 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control GLIS2 ENSG00000126603 UTR3 Human protein_coding chr16:4388414 chr16:4388399 . . 0 6 hm5C_associated_SNPs_11465 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4388375-4388437
64251 chr16 4388399 4388399 1 + C G rs147214646 4388418 + 4388398 4388438 41 TCTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCCTGCAG TGTACCCCCGCTGGGCCTGGCCTGGGCAGCGCCCCCTGCAG < 41bp 1 0.483500604238144 1 0.327621281147003 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GLIS2 ENSG00000126603 UTR3 Human protein_coding chr16:4388418 chr16:4388399 . . 0 2 hm5C_associated_SNPs_11466 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4388375-4388437
64251 chr16 4431026 4431026 1 + G A rs140274177 4431033 + 4431013 4431053 41 GGTGCCCCGAGACGTGCCACCCGACACGGTGGGGCTGTACG GGTGCCCCGAGACATGCCACCCGACACGGTGGGGCTGTACG < 41bp 1 0.0953071620042424 1 0.0655133128166199 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431033 chr16:4431026 nonsynonymous SNV 0.210 3 14 hm5C_associated_SNPs_11468 0 0 1 DDX3X POSTAR2 ENCODE chr16:4430998-4431032
64251 chr16 4431767 4431767 1 + C T rs148092711 4431752 + 4431732 4431772 41 GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCTGCAAC < 41bp 1 0.502522478465291 1 0.0682945251464844 experiment 0.994955043069417 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431752 chr16:4431767 nonsynonymous SNV 0.995 2 36 hm5C_associated_SNPs_11469 0 1 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:4431758-4431782
64251 chr16 4476089 4476089 1 + T C rs1139652 4476087 + 4476067 4476107 41 CATTGAGACCTGGTGTCAGCCTTACAGGTGAGGGCAGGTTC CATTGAGACCTGGTGTCAGCCTCACAGGTGAGGGCAGGTTC < 41bp 1 0.462460448631836 1 0.513574421405792 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4476087 chr16:4476089 nonsynonymous SNV 0.896 1 23 hm5C_associated_SNPs_11470 0 1 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:4476067-4476091
64251 chr16 4476089 4476089 1 + T C rs1139652 4476091 + 4476071 4476111 41 GAGACCTGGTGTCAGCCTTACAGGTGAGGGCAGGTTCCAAC GAGACCTGGTGTCAGCCTCACAGGTGAGGGCAGGTTCCAAC < 41bp 1 0.799020238137516 1 0.579722285270691 experiment 0.401959523724969 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4476091 chr16:4476089 nonsynonymous SNV 0.896 1 19 hm5C_associated_SNPs_11471 0 1 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:4476067-4476091
64251 chr16 4505882 4505882 1 + G A rs181511744 4505871 + 4505851 4505891 41 GAATTGAATATTGTGGATATCTTAGTTAAAGGCCATGCTTA GAATTGAATATTGTGGATATCTTAGTTAAAGACCATGCTTA < 41bp 1 0.362874308618818 1 0.0466935038566589 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJA3 ENSG00000103423 UTR3 Human protein_coding chr16:4505871 chr16:4505882 . . 0 32 hm5C_associated_SNPs_11472 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:4505816-4505962
64251 chr16 4506234 4506234 1 + G T rs547800803 4506230 + 4506210 4506250 41 AGTCCTTGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCT AGTCCTTGCTCCCACCCCATCCGGTATGGCCGCCTGTCCCT < 41bp 1 0.767601647972223 1 0.5079505443573 experiment 0.464796704055553 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJA3 ENSG00000103423 UTR3 Human protein_coding chr16:4506230 chr16:4506234 . . 0 25 hm5C_associated_SNPs_11476 0 0 3 DDX55 POSTAR2 ENCODE chr16:4506204-4506291
64251 chr16 4506234 4506234 1 + G T rs547800803 4506231 + 4506211 4506251 41 GTCCTTGCTCCCACCCCATCCGGGATGGCCGCCTGTCCCTG GTCCTTGCTCCCACCCCATCCGGTATGGCCGCCTGTCCCTG < 41bp 1 0.760940564697474 1 0.845646798610687 experiment 0.478118870605052 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJA3 ENSG00000103423 UTR3 Human protein_coding chr16:4506231 chr16:4506234 . . 0 24 hm5C_associated_SNPs_11477 0 0 3 DDX55 POSTAR2 ENCODE chr16:4506204-4506291
64251 chr16 4902939 4902939 1 + C G rs144891449 4902930 + 4902910 4902950 41 TTGGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTC TTGGTAGCCATGTCGGAGCCCCACAGGGTGCAGTTCACCTC < 41bp 1 0.348096002386722 1 0.187075585126877 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN1 ENSG00000118900 CDS Human protein_coding chr16:4902930 chr16:4902939 synonymous SNV . 0 30 hm5C_associated_SNPs_11481 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:4902937-4902972
64251 chr16 5123251 5123251 1 + T C rs140626461 5123234 + 5123214 5123254 41 GGAAGTTGATGTGGAGGGAGCCAGGTGCCTATATCTTTCTC GGAAGTTGATGTGGAGGGAGCCAGGTGCCTATATCTTCCTC < 41bp 1 0.427709031557209 1 0.659464955329895 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5123234 chr16:5123251 synonymous SNV . 0 38 hm5C_associated_SNPs_11482 0 0 9 CDC40 POSTAR2 ENCODE chr16:5123223-5123286
64251 chr16 8722776 8722776 1 + G T rs199694343 8722770 + 8722750 8722790 41 CCTCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGGCTG CCTCCAGGCCGGGACTGACACCACTGTCCAGGAAGTGGCTG < 41bp 1 0.323713832095068 1 0.0266492068767548 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722770 chr16:8722776 nonsynonymous SNV 0.002 0 27 hm5C_associated_SNPs_11483 0 0 5 GRWD1 POSTAR2 ENCODE chr16:8722735-8722805
64251 chr16 8877832 8877832 1 + C T rs8275 8877842 + 8877822 8877862 41 GAGACATGCTCTTTTGGGGGCTGGGGCTTTAGCTAGAAGAA GAGACATGCTTTTTTGGGGGCTGGGGCTTTAGCTAGAAGAA < 41bp 1 0.623828323666096 1 0.458969235420227 experiment 0.752343352667808 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABAT ENSG00000183044 UTR3 Human protein_coding chr16:8877842 chr16:8877832 . . 0 11 hm5C_associated_SNPs_11484 1 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr16:8877827-8877853
64251 chr16 11133681 11133681 1 + C T rs61740118 11133688 + 11133668 11133708 41 AGACCACCTACAACCACCCGCTAGCTGAAAGACTCATCAGG AGACCACCTACAATCACCCGCTAGCTGAAAGACTCATCAGG < 41bp 1 0.106267467402251 1 0.16377854347229 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133688 chr16:11133681 synonymous SNV . 0 14 hm5C_associated_SNPs_11486 0 0 1 PPIG POSTAR2 ENCODE chr16:11133647-11133734
64251 chr16 11274904 11274904 1 + G A rs199503706 11274886 + 11274866 11274906 41 GGGGCCTCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGG GGGGCCTCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGAGG < 41bp 1 0.25580975861959 1 0.125145941972733 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLEC16A ENSG00000038532 UTR3 Human protein_coding chr16:11274886 chr16:11274904 . . 0 39 hm5C_associated_SNPs_11487 0 0 1 UPF1 POSTAR2 ENCODE chr16:11274893-11274920
64251 chr16 14234431 14234431 1 + C G rs61744189 14234439 + 14234419 14234459 41 TTTAAGAGGCGTCTTACACTCCCTGTTGCCAGTGGCTGGAA TTTAAGAGGCGTGTTACACTCCCTGTTGCCAGTGGCTGGAA < 41bp 1 0.38216711837233 1 0.0862652361392975 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MKL2 ENSG00000186260 UTR5 Human protein_coding chr16:14234439 chr16:14234431 . . 0 13 hm5C_associated_SNPs_11500 0 0 4 BUD13 POSTAR2 ENCODE chr16:14234391-14234505
64251 chr16 14379814 14379814 1 + C G rs186671982 14379804 + 14379784 14379824 41 TAAACCGAAGATCACGGGTTCGAACCCCGTCCGTGCCTGAT TAAACCGAAGATCACGGGTTCGAACCCCGTGCGTGCCTGAT < 41bp 1 0.118507007920348 1 0.170836627483368 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MKL2;MIR193BHG ENSG00000201075;ENSG00000262454 intergenic Human other chr16:14379804 chr16:14379814 . . 0 31 hm5C_associated_SNPs_11501 0 0 38 SSB POSTAR2 GSE95683,GSM2521599 chr16:14379740-14379920
64251 chr16 14379814 14379814 1 + C G rs186671982 14379809 + 14379789 14379829 41 CGAAGATCACGGGTTCGAACCCCGTCCGTGCCTGATATCCA CGAAGATCACGGGTTCGAACCCCGTGCGTGCCTGATATCCA < 41bp 1 0.27672787391449 1 0.475039303302765 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MKL2;MIR193BHG ENSG00000201075;ENSG00000262454 intergenic Human other chr16:14379809 chr16:14379814 . . 0 26 hm5C_associated_SNPs_11502 0 0 38 SSB POSTAR2 GSE95683,GSM2521599 chr16:14379740-14379920
64251 chr16 14379814 14379814 1 + C G rs186671982 14379815 + 14379795 14379835 41 TCACGGGTTCGAACCCCGTCCGTGCCTGATATCCAACCTTC TCACGGGTTCGAACCCCGTGCGTGCCTGATATCCAACCTTC < 41bp 1 0.224088754796686 1 0.0401533544063568 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MKL2;MIR193BHG ENSG00000201075;ENSG00000262454 intergenic Human other chr16:14379815 chr16:14379814 . . 0 20 hm5C_associated_SNPs_11503 0 0 38 SSB POSTAR2 GSE95683,GSM2521599 chr16:14379740-14379920
64251 chr16 14726833 14726833 1 + G A rs563033863 14726831 + 14726811 14726851 41 TTCCTCTGCTCCCGCGGGGTCTGTGCTGAGAATAATGGCCC TTCCTCTGCTCCCGCGGGGTCTATGCTGAGAATAATGGCCC < 41bp 1 0.390537921440855 1 0.147723942995071 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control BFAR ENSG00000103429 UTR5 Human protein_coding chr16:14726831 chr16:14726833 . . 0 23 hm5C_associated_SNPs_11504 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:14726831-14726843
64251 chr16 15788041 15788041 1 + G T rs570994490 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGTGGGACCCCCCTCACACCTGCGGCCCG < 41bp 1 0.182133652490339 1 0.0634188055992126 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788041 synonymous SNV . 0 15 hm5C_associated_SNPs_11508 1 0 3 DDX24 POSTAR2 ENCODE chr16:15788032-15788113
64251 chr16 15788062 15788062 1 + G A rs1123418 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGGGGGACCCCCCTCACACCTGCAGCCCG < 41bp 1 0.170271322158392 1 0.103989154100418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788062 synonymous SNV . 0 36 hm5C_associated_SNPs_11509 2 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:15788053-15788101
64251 chr16 15819613 15819613 1 + C A rs147520971 15819625 + 15819605 15819645 41 GGCCACGTCCCCATGAGTGGCAAGGCAGGGTAAATGGCTAT GGCCACGTACCCATGAGTGGCAAGGCAGGGTAAATGGCTAT < 41bp 1 0.722572920364004 1 0.536014378070831 experiment 0.554854159271991 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 UTR3 Human protein_coding chr16:15819625 chr16:15819613 . . 0 9 hm5C_associated_SNPs_11510 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:15819596-15819629
64251 chr16 15819617 15819617 1 + A G rs140080894 15819625 + 15819605 15819645 41 GGCCACGTCCCCATGAGTGGCAAGGCAGGGTAAATGGCTAT GGCCACGTCCCCGTGAGTGGCAAGGCAGGGTAAATGGCTAT < 41bp 1 0.761875847388601 1 0.574335277080536 experiment 0.476248305222799 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 UTR3 Human protein_coding chr16:15819625 chr16:15819617 . . 0 13 hm5C_associated_SNPs_11511 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:15819596-15819629
64251 chr16 16101842 16101842 1 + C T rs41494447 16101834 + 16101814 16101854 41 TACATTCAGATGACACCTCTCAACAAAACCAAAACTGTAAG TACATTCAGATGACACCTCTCAACAAAATCAAAACTGTAAG < 41bp 1 0.456091323879215 1 0.453556925058365 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16101834 chr16:16101842 nonsynonymous SNV 0.996 0 29 hm5C_associated_SNPs_11512 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:16101822-16101848
64251 chr16 16236004 16236004 1 + T A rs212090 16236001 + 16235981 16236021 41 AACAATCAATGCTGTTATTACTGTTCCCACCATGATTGATG AACAATCAATGCTGTTATTACTGATCCCACCATGATTGATG < 41bp 1 0.11728493020634 1 0.167732983827591 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCC1 ENSG00000103222 UTR3 Human protein_coding chr16:16236001 chr16:16236004 . . 0 24 hm5C_associated_SNPs_11513 0 0 7 TIA1 POSTAR2 E-MTAB-432,ERR039786-ERR039787 chr16:16235985-16236006
64251 chr16 16236021 16236021 1 + G A rs113264879 16236001 + 16235981 16236021 41 AACAATCAATGCTGTTATTACTGTTCCCACCATGATTGATG AACAATCAATGCTGTTATTACTGTTCCCACCATGATTGATA < 41bp 1 0.0734055129151618 1 0.089742124080658 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCC1 ENSG00000103222 UTR3 Human protein_coding chr16:16236001 chr16:16236021 . . 0 41 hm5C_associated_SNPs_11514 0 0 4 DDX55 POSTAR2 ENCODE chr16:16235997-16236059
64251 chr16 16425513 16425513 1 + G T rs208656 16425501 + 16425481 16425521 41 ATCTGGCTCTCCATATGGGACCGGCCGCCTCGGAGCTGTTT ATCTGGCTCTCCATATGGGACCGGCCGCCTCGTAGCTGTTT < 41bp 1 0.0897215592875901 1 0.0741562247276306 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKD1P1 ENSG00000244257 ncRNA_exonic Human unprocessed_pseudogene chr16:16425501 chr16:16425513 . . 0 33 hm5C_associated_SNPs_11516 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:16425499-16425527
64251 chr16 16425513 16425513 1 + G T rs208656 16425509 + 16425489 16425529 41 CTCCATATGGGACCGGCCGCCTCGGAGCTGTTTCACTCGCA CTCCATATGGGACCGGCCGCCTCGTAGCTGTTTCACTCGCA < 41bp 1 0.343200880292911 1 0.531558036804199 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKD1P1 ENSG00000244257 ncRNA_exonic Human unprocessed_pseudogene chr16:16425509 chr16:16425513 . . 0 25 hm5C_associated_SNPs_11517 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:16425499-16425527
64251 chr16 16465466 16465466 1 + C G rs557228510 16465451 + 16465431 16465471 41 GCCTCCGTCGGTGCTGTGGTCACCCTGGACAGCAGCAACCC GCCTCCGTCGGTGCTGTGGTCACCCTGGACAGCAGGAACCC < 41bp 1 0.469467919633011 1 0.0691286027431488 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PKD1P4-NPIPA8 ENSG00000227827 ncRNA_exonic Human unprocessed_pseudogene chr16:16465451 chr16:16465466 . . 0 36 hm5C_associated_SNPs_11518 0 0 9 BUD13 POSTAR2 ENCODE chr16:16465420-16465488
64251 chr16 19131674 19131674 1 + G A rs149058873 19131655 + 19131635 19131675 41 CTCAAGCCATCCTCCCACCTCGGCCTCCCAAAGTGTTGGGA CTCAAGCCATCCTCCCACCTCGGCCTCCCAAAGTGTTGGAA < 41bp 1 0.439936252767666 1 0.254073143005371 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ITPRIPL2 ENSG00000261759 ncRNA_intronic Human antisense chr16:19131655 chr16:19131674 . . 0 40 hm5C_associated_SNPs_11526 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:19131669-19131705
64251 chr16 19460888 19460888 1 + G A rs16972013 19460903 + 19460883 19460923 41 TGAAAGTGGTCCTGTCCATGCTTATGGAAACCCACCATTGT TGAAAATGGTCCTGTCCATGCTTATGGAAACCCACCATTGT < 41bp 1 0.13601398022538 1 0.0959940254688263 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMC5 ENSG00000103534 CDS Human protein_coding chr16:19460903 chr16:19460888 nonsynonymous SNV 0.005 0 6 hm5C_associated_SNPs_11529 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:19460872-19460902
64251 chr16 20926975 20926975 1 + C T rs531105424 20926976 + 20926956 20926996 41 TCAGGGCAGATGGAAGACACCATCAAAGAAAAACAGTACAT TCAGGGCAGATGGAAGACATCATCAAAGAAAAACAGTACAT < 41bp 1 0.741087620033858 1 0.168603122234344 experiment 0.517824759932284 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20926976 chr16:20926975 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_11530 0 0 1 ZNF622 POSTAR2 ENCODE chr16:20926895-20926975
64251 chr16 22019653 22019653 1 + C A rs368259073 22019663 + 22019643 22019683 41 CTCAGGATGTCTCTTTCTGGCCGCCGATATCTTCGCCATCG CTCAGGATGTATCTTTCTGGCCGCCGATATCTTCGCCATCG < 41bp 1 0.485841921492373 1 0.0513626337051392 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C16orf52 ENSG00000185716 CDS Human protein_coding chr16:22019663 chr16:22019653 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_11531 0 0 8 DROSHA POSTAR2 ENCODE chr16:22019613-22019665
64251 chr16 22308511 22308511 1 + C T rs117203517 22308501 + 22308481 22308521 41 TAAGGCGCTGGATTAAGGCTCCAGTCTCTTCGGGGGCGTGG TAAGGCGCTGGATTAAGGCTCCAGTCTCTTTGGGGGCGTGG < 41bp 1 0.184281619446951 1 0.165005266666412 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 upstream Human protein_coding chr16:22308501 chr16:22308511 . . 0 31 hm5C_associated_SNPs_11532 0 0 8 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:22308500-22308540
64251 chr16 22308511 22308511 1 + C T rs117203517 22308517 + 22308497 22308537 41 GGCTCCAGTCTCTTCGGGGGCGTGGGTTCGAATCCCACCGC GGCTCCAGTCTCTTTGGGGGCGTGGGTTCGAATCCCACCGC < 41bp 1 0.782773923974276 1 0.709291875362396 experiment 0.434452152051448 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 upstream Human protein_coding chr16:22308517 chr16:22308511 . . 0 15 hm5C_associated_SNPs_11533 0 0 8 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:22308500-22308540
64251 chr16 22308511 22308511 1 + C T rs117203517 22308531 + 22308511 22308551 41 CGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGGTTGCTG TGGGGGCGTGGGTTCGAATCCCACCGCTGCCAGGGTTGCTG < 41bp 1 0.210394268593037 1 0.122837662696838 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target POLR3E ENSG00000058600 upstream Human protein_coding chr16:22308531 chr16:22308511 . . 0 1 hm5C_associated_SNPs_11534 0 0 8 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:22308500-22308540
64251 chr16 22328486 22328486 1 + C T rs143440180 22328499 + 22328479 22328519 41 CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT CTGCGCATGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT < 41bp 1 0.214542957172554 1 0.220988094806671 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22328499 chr16:22328486 nonsynonymous SNV 0.869 4 8 hm5C_associated_SNPs_11535 0 0 5 BUD13 POSTAR2 ENCODE chr16:22328410-22328512
64251 chr16 24550930 24550930 1 + A C rs9922288 24550931 + 24550911 24550951 41 AGGCCGCGTCCGCCATAGTACCTGGCTTGGAGGTGTCGCCG AGGCCGCGTCCGCCATAGTCCCTGGCTTGGAGGTGTCGCCG < 41bp 1 0.471848405962513 1 0.0840450525283813 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBBP6 ENSG00000122257 UTR5 Human protein_coding chr16:24550931 chr16:24550930 . . 0 20 hm5C_associated_SNPs_11537 0 0 28 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:24550909-24550945
64251 chr16 24582709 24582709 1 + A G rs140198744 24582720 + 24582700 24582740 41 GAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAGGCTAGA GAAATTTTAGAAGTCTGTCTCAATCTTCCAAAGAGGCTAGA < 41bp 1 0.0962916229116008 1 0.668595612049103 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24582720 chr16:24582709 nonsynonymous SNV 0.998 1 10 hm5C_associated_SNPs_11538 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:24582690-24582731
64251 chr16 27325264 27325264 1 + G C rs35583025 27325251 + 27325231 27325271 41 GGTCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCGGGCCAGG GGTCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCCGGCCAGG < 41bp 1 0.679950925340196 1 0.22250360250473 experiment 0.640098149319608 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325251 chr16:27325264 . . 0 34 hm5C_associated_SNPs_11539 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr16 27325264 27325264 1 + G C rs35583025 27325252 + 27325232 27325272 41 GTCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCGGGCCAGGG GTCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCCGGCCAGGG < 41bp 1 0.536450409925766 1 0.173686474561691 experiment 0.927099180148469 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325252 chr16:27325264 . . 0 33 hm5C_associated_SNPs_11540 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr16 27325264 27325264 1 + G C rs35583025 27325253 + 27325233 27325273 41 TCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCGGGCCAGGGA TCTCCGCGCCCAGGAAAGCCCCGCGCGGCGCCGGCCAGGGA < 41bp 1 0.7323753540828 1 0.406201720237732 experiment 0.5352492918344 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325253 chr16:27325264 . . 0 32 hm5C_associated_SNPs_11541 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr16 27325264 27325264 1 + G C rs35583025 27325254 + 27325234 27325274 41 CTCCGCGCCCAGGAAAGCCCCGCGCGGCGCGGGCCAGGGAA CTCCGCGCCCAGGAAAGCCCCGCGCGGCGCCGGCCAGGGAA < 41bp 1 0.738155491261141 1 0.455058127641678 experiment 0.523689017477718 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325254 chr16:27325264 . . 0 31 hm5C_associated_SNPs_11542 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr16 27325264 27325264 1 + G C rs35583025 27325256 + 27325236 27325276 41 CCGCGCCCAGGAAAGCCCCGCGCGGCGCGGGCCAGGGAAGG CCGCGCCCAGGAAAGCCCCGCGCGGCGCCGGCCAGGGAAGG < 41bp 1 0.708991000455412 1 0.637053191661835 experiment 0.582017999089176 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325256 chr16:27325264 . . 0 29 hm5C_associated_SNPs_11543 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr16 28333285 28333285 1 + G A rs112395621 28333281 + 28333261 28333301 41 GTTCGTGCTGGAAATTTCTCCTGGGTTTCTTGGGGTCAAAC GTTCGTGCTGGAAATTTCTCCTGGATTTCTTGGGGTCAAAC < 41bp 1 0.763557311246125 1 0.714272320270538 experiment 0.472885377507751 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28333281 chr16:28333285 . . 0 25 hm5C_associated_SNPs_11550 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr16:28333284-28333307
64251 chr16 28334234 28334234 1 + G A rs57895968 28334241 + 28334221 28334261 41 CGCTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTC CGCTCTCTCTCTCACGCGCGCTCTCTCTCTCCCTCTCTCTC < 41bp 1 0.0497250951238474 1 0.0233500003814697 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334241 chr16:28334234 . . 0 14 hm5C_associated_SNPs_11557 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334243 + 28334223 28334263 41 CTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTC CTCTCTCTCTCACGCGCGCTCTCTCTCTCCCTCTCTCTCTC < 41bp 1 0.101228467524662 1 0.0490353405475616 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334243 chr16:28334234 . . 0 12 hm5C_associated_SNPs_11558 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334245 + 28334225 28334265 41 CTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTC CTCTCTCTCACGCGCGCTCTCTCTCTCCCTCTCTCTCTCTC < 41bp 1 0.137030675277735 1 0.0586787164211273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334245 chr16:28334234 . . 0 10 hm5C_associated_SNPs_11559 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334247 + 28334227 28334267 41 CTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTC CTCTCTCACGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTC < 41bp 1 0.113393052777185 1 0.125375151634216 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334247 chr16:28334234 . . 0 8 hm5C_associated_SNPs_11560 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334249 + 28334229 28334269 41 CTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTC CTCTCACGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTC < 41bp 1 0.223731927520549 1 0.40145269036293 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334249 chr16:28334234 . . 0 6 hm5C_associated_SNPs_11561 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334251 + 28334231 28334271 41 CTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC CTCACGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC < 41bp 1 0.051866086943499 1 0.0837922990322113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334251 chr16:28334234 . . 0 4 hm5C_associated_SNPs_11562 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334234 28334234 1 + G A rs57895968 28334253 + 28334233 28334273 41 CGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTC CACGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.076272953372927 1 0.0603934824466705 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334253 chr16:28334234 . . 0 2 hm5C_associated_SNPs_11563 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334241 + 28334221 28334261 41 CGCTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTC CGCTCTCTCTCTCGCGCGCACTCTCTCTCTCCCTCTCTCTC < 41bp 1 0.0644593359310805 1 0.0304890871047974 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334241 chr16:28334240 . . 0 20 hm5C_associated_SNPs_11564 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334243 + 28334223 28334263 41 CTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTC CTCTCTCTCTCGCGCGCACTCTCTCTCTCCCTCTCTCTCTC < 41bp 1 0.144079295722035 1 0.0448679327964783 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334243 chr16:28334240 . . 0 18 hm5C_associated_SNPs_11565 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334245 + 28334225 28334265 41 CTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTC CTCTCTCTCGCGCGCACTCTCTCTCTCCCTCTCTCTCTCTC < 41bp 1 0.143655274832545 1 0.134949177503586 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334245 chr16:28334240 . . 0 16 hm5C_associated_SNPs_11566 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334247 + 28334227 28334267 41 CTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTC CTCTCTCGCGCGCACTCTCTCTCTCCCTCTCTCTCTCTCTC < 41bp 1 0.100579350193328 1 0.142162412405014 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334247 chr16:28334240 . . 0 14 hm5C_associated_SNPs_11567 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334249 + 28334229 28334269 41 CTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTC CTCTCGCGCGCACTCTCTCTCTCCCTCTCTCTCTCTCTCTC < 41bp 1 0.202998849090741 1 0.246207147836685 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334249 chr16:28334240 . . 0 12 hm5C_associated_SNPs_11568 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334251 + 28334231 28334271 41 CTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC CTCGCGCGCACTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC < 41bp 1 0.044446173370904 1 0.0356850624084473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334251 chr16:28334240 . . 0 10 hm5C_associated_SNPs_11569 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334253 + 28334233 28334273 41 CGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTC CGCGCGCACTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0744868262819194 1 0.0342608392238617 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334253 chr16:28334240 . . 0 8 hm5C_associated_SNPs_11570 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334255 + 28334235 28334275 41 CGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTC CGCGCACTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0674271739417681 1 0.131687521934509 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334255 chr16:28334240 . . 0 6 hm5C_associated_SNPs_11571 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334257 + 28334237 28334277 41 CGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTC CGCACTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0713253102160726 1 0.0684449672698975 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334257 chr16:28334240 . . 0 4 hm5C_associated_SNPs_11572 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334240 28334240 1 + G A rs2937102 28334259 + 28334239 28334279 41 CGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTC CACTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0731887873172503 1 0.110819637775421 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334259 chr16:28334240 . . 0 2 hm5C_associated_SNPs_11573 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334241 + 28334221 28334261 41 CGCTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTC CGCTCTCTCTCTCGCGCGCGCTCTCTCTCTCACTCTCTCTC < 41bp 1 0.0615927643967207 1 0.0337266027927399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334241 chr16:28334252 . . 0 32 hm5C_associated_SNPs_11574 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334243 + 28334223 28334263 41 CTCTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTC CTCTCTCTCTCGCGCGCGCTCTCTCTCTCACTCTCTCTCTC < 41bp 1 0.109012940355044 1 0.0524032711982727 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334243 chr16:28334252 . . 0 30 hm5C_associated_SNPs_11575 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334245 + 28334225 28334265 41 CTCTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTC CTCTCTCTCGCGCGCGCTCTCTCTCTCACTCTCTCTCTCTC < 41bp 1 0.155874823790934 1 0.160698473453522 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334245 chr16:28334252 . . 0 28 hm5C_associated_SNPs_11576 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334247 + 28334227 28334267 41 CTCTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTC CTCTCTCGCGCGCGCTCTCTCTCTCACTCTCTCTCTCTCTC < 41bp 1 0.142930816238594 1 0.128502607345581 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334247 chr16:28334252 . . 0 26 hm5C_associated_SNPs_11577 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334249 + 28334229 28334269 41 CTCTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTC CTCTCGCGCGCGCTCTCTCTCTCACTCTCTCTCTCTCTCTC < 41bp 1 0.186127381026589 1 0.0930871367454529 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334249 chr16:28334252 . . 0 24 hm5C_associated_SNPs_11578 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334251 + 28334231 28334271 41 CTCGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTC CTCGCGCGCGCTCTCTCTCTCACTCTCTCTCTCTCTCTCTC < 41bp 1 0.129677382497 1 0.11958372592926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334251 chr16:28334252 . . 0 22 hm5C_associated_SNPs_11579 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334253 + 28334233 28334273 41 CGCGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTC CGCGCGCGCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0873303035492949 1 0.0695760548114777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334253 chr16:28334252 . . 0 20 hm5C_associated_SNPs_11580 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334255 + 28334235 28334275 41 CGCGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTC CGCGCGCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0897160072756439 1 0.0593827962875366 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334255 chr16:28334252 . . 0 18 hm5C_associated_SNPs_11581 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334257 + 28334237 28334277 41 CGCGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTC CGCGCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0781529986706245 1 0.0544576346874237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334257 chr16:28334252 . . 0 16 hm5C_associated_SNPs_11582 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334259 + 28334239 28334279 41 CGCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTC CGCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0797174893217376 1 0.0709303319454193 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334259 chr16:28334252 . . 0 14 hm5C_associated_SNPs_11583 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334261 + 28334241 28334281 41 CTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0766939504276479 1 0.113385230302811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334261 chr16:28334252 . . 0 12 hm5C_associated_SNPs_11584 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334263 + 28334243 28334283 41 CTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTCTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0726203284102057 1 0.10577055811882 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334263 chr16:28334252 . . 0 10 hm5C_associated_SNPs_11585 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334265 + 28334245 28334285 41 CTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTCTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0762016184674943 1 0.0992410480976105 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334265 chr16:28334252 . . 0 8 hm5C_associated_SNPs_11586 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334267 + 28334247 28334287 41 CTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTCTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0766903393225659 1 0.0991062223911285 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334267 chr16:28334252 . . 0 6 hm5C_associated_SNPs_11587 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334269 + 28334249 28334289 41 CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0772481581614105 1 0.0835127532482147 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334269 chr16:28334252 . . 0 4 hm5C_associated_SNPs_11588 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28334252 28334252 1 + C A rs28604268 28334271 + 28334251 28334291 41 CCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC CACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC < 41bp 1 0.0685207038595525 1 0.10300749540329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SBK1 ENSG00000188322 UTR3 Human protein_coding chr16:28334271 chr16:28334252 . . 0 2 hm5C_associated_SNPs_11589 0 0 1 PTBP1 POSTAR2 ENCODE chr16:28334234-28334368
64251 chr16 28845909 28845909 1 + G A rs142624994 28845926 + 28845906 28845946 41 CCCGCCTCTGGTGGCTGCCACGCCCTATTCTTCCTACATCC CCCACCTCTGGTGGCTGCCACGCCCTATTCTTCCTACATCC < 41bp 1 0.424015906342943 1 0.864451289176941 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845926 chr16:28845909 synonymous SNV . 0 4 hm5C_associated_SNPs_11590 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr16:28845895-28845915
64251 chr16 28847772 28847772 1 + C G rs201701678 28847774 + 28847754 28847794 41 CCCACTGCCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCT CCCACTGCCTCCCCAGCTGTCAGTGACCCCGACTGTCTCCT < 41bp 1 0.561029405076436 1 0.728786587715149 experiment 0.877941189847127 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847774 chr16:28847772 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_11591 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chr16 28848356 28848356 1 + C T rs193268136 28848373 + 28848353 28848393 41 CCCCGCTGGAGACGGAAGATCTTTTATTTTCTATTATTTAT CCCTGCTGGAGACGGAAGATCTTTTATTTTCTATTATTTAT < 41bp 1 0.131499785666376 1 0.0700458884239197 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATXN2L ENSG00000260570 ncRNA_exonic Human antisense chr16:28848373 chr16:28848356 . . 0 4 hm5C_associated_SNPs_11592 0 0 39 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:28848233-28848357
64251 chr16 28848426 28848426 1 + C A rs534808521 28848411 + 28848391 28848431 41 TATAACTTCAGACTTGGGCCCCCTGTTCTTTCTTTCCCATT TATAACTTCAGACTTGGGCCCCCTGTTCTTTCTTTACCATT < 41bp 1 0.0996101046002554 1 0.0378513336181641 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000260570 ncRNA_exonic Human antisense chr16:28848411 chr16:28848426 . . 0 36 hm5C_associated_SNPs_11593 0 0 48 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:28848420-28848440
64251 chr16 28970053 28970053 1 + A T rs536656003 28970039 + 28970019 28970059 41 TTGTTGTCCCCATCCCTAGTCGGAGCCCCTGCAGAGTGTGG TTGTTGTCCCCATCCCTAGTCGGAGCCCCTGCAGTGTGTGG < 41bp 1 0.555847902171561 1 0.898181438446045 experiment 0.888304195656878 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970039 chr16:28970053 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_11594 0 0 28 TARDBP POSTAR2 DRA001158,DRS012386 chr16:28970021-28970058
64251 chr16 28970122 28970122 1 + A T rs201303990 28970135 + 28970115 28970155 41 TGGAGAGACAGAGCTATCACCTACTGCCACTCCCAGGACCC TGGAGAGTCAGAGCTATCACCTACTGCCACTCCCAGGACCC < 41bp 1 0.516795739937645 1 0.0385141372680664 experiment 0.966408520124709 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970135 chr16:28970122 nonsynonymous SNV 0.996 0 8 hm5C_associated_SNPs_11595 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:28970097-28970137
64251 chr16 28975329 28975329 1 + G A rs186123506 28975347 + 28975327 28975367 41 CTGTTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTT CTATTGACCCTGGTTTAGAGCCGTTAACCACTTGGTGAGTT < 41bp 1 0.110339797482667 1 0.103283315896988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFATC2IP ENSG00000260853 ncRNA_intronic Human antisense chr16:28975347 chr16:28975329 . . 0 3 hm5C_associated_SNPs_11596 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:28975296-28975330
64251 chr16 29706442 29706442 1 + C T rs200392225 29706444 + 29706424 29706464 41 GCTCCTGGTGGGCGGGGCCGCCTCGCACCGCTACGACCTGG GCTCCTGGTGGGCGGGGCTGCCTCGCACCGCTACGACCTGG < 41bp 1 0.239839166229522 1 0.0902343094348907 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706444 chr16:29706442 synonymous SNV . 0 19 hm5C_associated_SNPs_11597 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 29706442 29706442 1 + C T rs200392225 29706451 + 29706431 29706471 41 GTGGGCGGGGCCGCCTCGCACCGCTACGACCTGGGAGGGCT GTGGGCGGGGCTGCCTCGCACCGCTACGACCTGGGAGGGCT < 41bp 1 0.392562515359222 1 0.12350133061409 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706451 chr16:29706442 synonymous SNV . 0 12 hm5C_associated_SNPs_11598 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 29706444 29706444 1 + C T rs2303255 29706442 + 29706422 29706462 41 GGGCTCCTGGTGGGCGGGGCCGCCTCGCACCGCTACGACCT GGGCTCCTGGTGGGCGGGGCCGTCTCGCACCGCTACGACCT < 41bp 1 0.262940996829933 1 0.199633538722992 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706442 chr16:29706444 nonsynonymous SNV 0.221 1 23 hm5C_associated_SNPs_11599 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 29706444 29706444 1 + C T rs2303255 29706451 + 29706431 29706471 41 GTGGGCGGGGCCGCCTCGCACCGCTACGACCTGGGAGGGCT GTGGGCGGGGCCGTCTCGCACCGCTACGACCTGGGAGGGCT < 41bp 1 0.430057303850431 1 0.106390804052353 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29706451 chr16:29706444 nonsynonymous SNV 0.221 1 14 hm5C_associated_SNPs_11600 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29706418-29706454
64251 chr16 29708350 29708350 1 + A G rs9932770 29708330 + 29708310 29708350 41 CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTCA CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTCG < 41bp 1 0.485722947965964 1 0.269349038600922 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708330 chr16:29708350 nonsynonymous SNV 0.004 0 41 hm5C_associated_SNPs_11601 0 0 4 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr16 29810471 29810471 1 + G A rs550717370 29810478 + 29810458 29810498 41 CGGCTCAACCAGCGCTCCTCCCGCAGTCATGCTGTGCTCCT CGGCTCAACCAGCACTCCTCCCGCAGTCATGCTGTGCTCCT < 41bp 1 0.581314165315232 1 0.169766873121262 experiment 0.837371669369536 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810478 chr16:29810471 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_11602 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:29810466-29810484
64251 chr16 29810471 29810471 1 + G A rs550717370 29810479 + 29810459 29810499 41 GGCTCAACCAGCGCTCCTCCCGCAGTCATGCTGTGCTCCTG GGCTCAACCAGCACTCCTCCCGCAGTCATGCTGTGCTCCTG < 41bp 1 0.701378985794274 1 0.345238983631134 experiment 0.597242028411452 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810479 chr16:29810471 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_11603 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:29810466-29810484
64251 chr16 29817998 29817998 1 + C G rs111993640 29817978 + 29817958 29817998 41 GGGCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCC GGGCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCG < 41bp 1 0.622258891512964 1 0.457547575235367 experiment 0.755482216974072 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAZ ENSG00000259952 ncRNA_intronic Human antisense chr16:29817978 chr16:29817998 . . 0 41 hm5C_associated_SNPs_11604 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:29817940-29818060
64251 chr16 29817998 29817998 1 + C G rs111993640 29817979 + 29817959 29817999 41 GGCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCCG GGCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCGG < 41bp 1 0.706950390076535 1 0.732679843902588 experiment 0.586099219846929 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAZ ENSG00000259952 ncRNA_intronic Human antisense chr16:29817979 chr16:29817998 . . 0 40 hm5C_associated_SNPs_11605 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:29817940-29818060
64251 chr16 29817998 29817998 1 + C G rs111993640 29817980 + 29817960 29818000 41 GCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCCGG GCCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCGGG < 41bp 1 0.660455247842262 1 0.882867574691772 experiment 0.679089504315475 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAZ ENSG00000259952 ncRNA_intronic Human antisense chr16:29817980 chr16:29817998 . . 0 39 hm5C_associated_SNPs_11606 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:29817940-29818060
64251 chr16 29817998 29817998 1 + C G rs111993640 29817981 + 29817961 29818001 41 CCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCCGGG CCCCGCGCGGCCCGCGCCCCCGGCCCCCGCTGAGCCCGGGG < 41bp 1 0.694111470405749 1 0.799596190452576 experiment 0.611777059188502 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAZ ENSG00000259952 ncRNA_intronic Human antisense chr16:29817981 chr16:29817998 . . 0 38 hm5C_associated_SNPs_11607 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:29817940-29818060
64251 chr16 29818888 29818888 1 + C G rs570535260 29818891 + 29818871 29818911 41 CGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGA CGGCGCTGCCGCAGTGGGCGCCGGTGGCGTGGTGACCACGA < 41bp 1 0.574344968977466 1 0.838145017623901 experiment 0.851310062045068 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818891 chr16:29818888 nonsynonymous SNV 0.962 0 18 hm5C_associated_SNPs_11608 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29818875-29818902
64251 chr16 29818888 29818888 1 + C G rs570535260 29818892 + 29818872 29818912 41 GGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGAC GGCGCTGCCGCAGTGGGCGCCGGTGGCGTGGTGACCACGAC < 41bp 1 0.604751823370441 1 0.90708726644516 experiment 0.790496353259118 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818892 chr16:29818888 nonsynonymous SNV 0.962 0 17 hm5C_associated_SNPs_11609 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29818875-29818902
64251 chr16 29821868 29821868 1 + G A rs11144 29821878 + 29821858 29821898 41 GTAAGCCCATGCCCTGTCTTCCCAGGGACTTGTGAGCCTCT GTAAGCCCATACCCTGTCTTCCCAGGGACTTGTGAGCCTCT < 41bp 1 0.38123586819995 1 0.292255282402039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAZ ENSG00000238045 ncRNA_exonic Human antisense chr16:29821878 chr16:29821868 . . 0 11 hm5C_associated_SNPs_11610 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:29821840-29821880
64251 chr16 29827587 29827587 1 + C G rs192974582 29827580 + 29827560 29827600 41 TGGAAGCGAGAAGAGTGGCCCGTCCCTCTCCTCCCCCTTTC TGGAAGCGAGAAGAGTGGCCCGTCCCTGTCCTCCCCCTTTC < 41bp 1 0.219496555842978 1 0.130719274282455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAGR1 ENSG00000261962 ncRNA_intronic Human other chr16:29827580 chr16:29827587 . . 0 28 hm5C_associated_SNPs_11611 0 0 10 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:29827560-29827600
64251 chr16 29827794 29827794 1 + C T rs367962544 29827783 + 29827763 29827803 41 AACCCCCAGGGGAGCCCGATCCCTGGGGGACCCTGGCTTCG AACCCCCAGGGGAGCCCGATCCCTGGGGGACTCTGGCTTCG < 41bp 1 0.410994401339239 1 0.51846444606781 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PAGR1 ENSG00000261962 ncRNA_intronic Human other chr16:29827783 chr16:29827794 . . 0 32 hm5C_associated_SNPs_11612 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:29827762-29827800
64251 chr16 29827794 29827794 1 + C T rs367962544 29827784 + 29827764 29827804 41 ACCCCCAGGGGAGCCCGATCCCTGGGGGACCCTGGCTTCGG ACCCCCAGGGGAGCCCGATCCCTGGGGGACTCTGGCTTCGG < 41bp 1 0.511105263481925 1 0.691564977169037 experiment 0.977789473036151 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PAGR1 ENSG00000261962 ncRNA_intronic Human other chr16:29827784 chr16:29827794 . . 0 31 hm5C_associated_SNPs_11613 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:29827762-29827800
64251 chr16 29831617 29831617 1 + A G rs12149514 29831605 + 29831585 29831625 41 CAGTCCCACTCCAGTGCAGCCAGCTGGCTCCAAGGTAGAAA CAGTCCCACTCCAGTGCAGCCAGCTGGCTCCAGGGTAGAAA < 41bp 1 0.435585669864068 1 0.183151125907898 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAGR1 ENSG00000261962 ncRNA_exonic Human other chr16:29831605 chr16:29831617 . . 0 33 hm5C_associated_SNPs_11614 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:29831600-29831620
64251 chr16 29994922 29994922 1 + C T rs3814883 29994940 + 29994920 29994960 41 TCCGCCCGCCGCCGGGCCTACTGCCGTAACCGAGACCACTT TCTGCCCGCCGCCGGGCCTACTGCCGTAACCGAGACCACTT < 41bp 1 0.628882505140034 1 0.0797471702098846 experiment 0.742234989719933 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994940 chr16:29994922 synonymous SNV . 0 3 hm5C_associated_SNPs_11616 0 1 3 DDX6 POSTAR2 ENCODE chr16:29994896-29994944
64251 chr16 30003372 30003372 1 + C T rs185285376 30003352 + 30003332 30003372 41 TCAGGATGGGGTCTTGGGGTCAGGATGCCTGGGTCTCTTCC TCAGGATGGGGTCTTGGGGTCAGGATGCCTGGGTCTCTTCT < 41bp 1 0.765763884446087 1 0.819483160972595 experiment 0.468472231107826 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 UTR3 Human protein_coding chr16:30003352 chr16:30003372 . . 0 41 hm5C_associated_SNPs_11617 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:30003310-30003374
64251 chr16 30016644 30016644 1 + C A rs201487520 30016663 + 30016643 30016683 41 CCCTAAGATGCCCCCCCCCACGATCCTGAGCACGGTCCCTC CACTAAGATGCCCCCCCCCACGATCCTGAGCACGGTCCCTC < 41bp 1 0.252848002422029 1 0.119043618440628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INO80E ENSG00000169592 CDS Human protein_coding chr16:30016663 chr16:30016644 nonsynonymous SNV 0.111 0 2 hm5C_associated_SNPs_11618 0 0 1 XPO5 POSTAR2 ENCODE chr16:30016598-30016646
64251 chr16 30016676 30016676 1 + G A rs531403814 30016663 + 30016643 30016683 41 CCCTAAGATGCCCCCCCCCACGATCCTGAGCACGGTCCCTC CCCTAAGATGCCCCCCCCCACGATCCTGAGCACAGTCCCTC < 41bp 1 0.264389520540827 1 0.11319375038147 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INO80E ENSG00000169592 CDS Human protein_coding chr16:30016663 chr16:30016676 synonymous SNV . 0 34 hm5C_associated_SNPs_11619 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:30016660-30016680
64251 chr16 30077131 30077131 1 + C G rs574106376 30077143 + 30077123 30077163 41 GTTCCTCTCGGAACGCGCCGCAGAAGGGGTCCTGGTGACGA GTTCCTCTGGGAACGCGCCGCAGAAGGGGTCCTGGTGACGA < 41bp 1 0.391141867577334 1 0.861567616462708 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ALDOA ENSG00000149925 UTR5 Human protein_coding chr16:30077143 chr16:30077131 . . 0 9 hm5C_associated_SNPs_11621 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:30077080-30077220
64251 chr16 30429848 30429848 1 + G A rs536440990 30429844 + 30429824 30429864 41 GAGAATCCCCTGCCGGGGTCCCTGGAAACAGTGCCCACCCC GAGAATCCCCTGCCGGGGTCCCTGAAAACAGTGCCCACCCC < 41bp 1 0.524857042383846 1 0.363193929195404 experiment 0.950285915232308 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF771 ENSG00000179965 UTR3 Human protein_coding chr16:30429844 chr16:30429848 . . 0 25 hm5C_associated_SNPs_11622 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30429840-30429860
64251 chr16 30786296 30786296 1 + A G rs546891184 30786306 + 30786286 30786326 41 CCAACTTCCAATCATTCCAGCTAGAAGAGCTTCCCCCTGAC CCAACTTCCAGTCATTCCAGCTAGAAGAGCTTCCCCCTGAC < 41bp 1 0.703649510569067 1 0.408146023750305 experiment 0.592700978861866 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF40 ENSG00000103549 UTR3 Human protein_coding chr16:30786306 chr16:30786296 . . 0 11 hm5C_associated_SNPs_11623 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:30786280-30786305
64251 chr16 30964940 30964940 1 + A G rs9926903 30964947 + 30964927 30964967 41 CAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA CAGCACCGTCCCAGGCTGAGCCAGCCTGCCCACCCCGGCAA < 41bp 1 0.38630544071884 1 0.16358670592308 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964947 chr16:30964940 synonymous SNV . 0 14 hm5C_associated_SNPs_11624 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr16 30976363 30976363 1 + C G rs201391072 30976360 + 30976340 30976380 41 GGCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAA GGCCTCCTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAA < 41bp 1 0.170778664435486 1 0.257780462503433 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976360 chr16:30976363 nonsynonymous SNV 0.977 3 24 hm5C_associated_SNPs_11625 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976363 30976363 1 + C G rs201391072 30976361 + 30976341 30976381 41 GCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAAC GCCTCCTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAAC < 41bp 1 0.238819707344888 1 0.156724542379379 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976361 chr16:30976363 nonsynonymous SNV 0.977 3 23 hm5C_associated_SNPs_11626 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976363 30976363 1 + C G rs201391072 30976364 + 30976344 30976384 41 TCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTG TCCTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAACCTG < 41bp 1 0.294899533033884 1 0.167646884918213 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976364 chr16:30976363 nonsynonymous SNV 0.977 3 20 hm5C_associated_SNPs_11627 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976363 30976363 1 + C G rs201391072 30976365 + 30976345 30976385 41 CCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGG CCTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAACCTGG < 41bp 1 0.382604729393545 1 0.346974492073059 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976365 chr16:30976363 nonsynonymous SNV 0.977 3 19 hm5C_associated_SNPs_11628 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976363 30976363 1 + C G rs201391072 30976366 + 30976346 30976386 41 CTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGT CTGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAACCTGGT < 41bp 1 0.585433543859752 1 0.557166755199432 experiment 0.829132912280496 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976366 chr16:30976363 nonsynonymous SNV 0.977 3 18 hm5C_associated_SNPs_11629 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976363 30976363 1 + C G rs201391072 30976367 + 30976347 30976387 41 TGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGTG TGCCTCAGAGGCTCCAGCCCCGGAGCCTCCAGAACCTGGTG < 41bp 1 0.475917984146113 1 0.804329991340637 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976367 chr16:30976363 nonsynonymous SNV 0.977 3 17 hm5C_associated_SNPs_11630 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 31000061 31000061 1 + C A rs537698128 31000058 + 31000038 31000078 41 GGGTTTGGGGACAGAGTGTCCTTCCTCTGTCCTCTCATCCC GGGTTTGGGGACAGAGTGTCCTTACTCTGTCCTCTCATCCC < 41bp 1 0.220981622236847 1 0.0325913429260254 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HSD3B7 ENSG00000099377 UTR3 Human protein_coding chr16:31000058 chr16:31000061 . . 0 24 hm5C_associated_SNPs_11632 0 0 5 DDX55 POSTAR2 ENCODE chr16:31000005-31000073
64251 chr16 31087733 31087733 1 + C T rs201805037 31087730 + 31087710 31087750 41 AGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAAC AGCTCTCTCGGCACCGAGAACTGTTCCATCCATCTCCCAAC < 41bp 1 0.161770849332751 1 0.0927907526493073 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31087730 chr16:31087733 nonsynonymous SNV 0.989 2 24 hm5C_associated_SNPs_11633 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:31087720-31087752
64251 chr16 31142056 31142056 1 + C T rs138969624 31142076 + 31142056 31142096 41 CCTTTTTGCAGCCAGATGACCAGTATCACCCAAAATGACAT TCTTTTTGCAGCCAGATGACCAGTATCACCCAAAATGACAT < 41bp 1 0.450118311985729 1 0.32211834192276 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KAT8 ENSG00000103510 UTR3 Human protein_coding chr16:31142076 chr16:31142056 . . 0 1 hm5C_associated_SNPs_11637 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:31142050-31142088
64251 chr16 31191482 31191482 1 + A G rs929867 31191478 + 31191458 31191498 41 CTGCTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAA CTGCTCAGTCCTCCAGGCGTCGGTGCTCAGCGGTGTTGGAA < 41bp 1 0.460606531178612 1 0.399450600147247 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191478 chr16:31191482 . . 0 25 hm5C_associated_SNPs_11638 1 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31191482 31191482 1 + A G rs929867 31191483 + 31191463 31191503 41 CAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTTCG CAGTCCTCCAGGCGTCGGTGCTCAGCGGTGTTGGAACTTCG < 41bp 1 0.329508905183148 1 0.174594640731812 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191483 chr16:31191482 . . 0 20 hm5C_associated_SNPs_11639 1 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31191489 31191489 1 + G A rs72550864 31191478 + 31191458 31191498 41 CTGCTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAA CTGCTCAGTCCTCCAGGCGTCGGTACTCAGCAGTGTTGGAA < 41bp 1 0.549781715972129 1 0.380760610103607 experiment 0.900436568055742 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191478 chr16:31191489 . . 0 32 hm5C_associated_SNPs_11640 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31191489 31191489 1 + G A rs72550864 31191483 + 31191463 31191503 41 CAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTTCG CAGTCCTCCAGGCGTCGGTACTCAGCAGTGTTGGAACTTCG < 41bp 1 0.329485902846685 1 0.208639770746231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191483 chr16:31191489 . . 0 27 hm5C_associated_SNPs_11641 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31191497 31191497 1 + A G rs67676356 31191478 + 31191458 31191498 41 CTGCTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAA CTGCTCAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGGA < 41bp 1 0.53624462149498 1 0.437256783246994 experiment 0.927510757010039 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191478 chr16:31191497 . . 0 40 hm5C_associated_SNPs_11642 1 0 44 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31191497 31191497 1 + A G rs67676356 31191483 + 31191463 31191503 41 CAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTTCG CAGTCCTCCAGGCGTCGGTACTCAGCGGTGTTGGGACTTCG < 41bp 1 0.34676884714378 1 0.391447156667709 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUS ENSG00000089280 UTR5 Human protein_coding chr16:31191483 chr16:31191497 . . 0 35 hm5C_associated_SNPs_11643 1 0 44 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31191460-31191500
64251 chr16 31194158 31194158 1 + C G rs185469113 31194160 + 31194140 31194180 41 CGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAG CGATTCTCCTGCCTCAGCGTCCTGAGTAGCTGGGATTACAG < 41bp 1 0.105380378128661 1 0.120123267173767 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUS ENSG00000260304 ncRNA_exonic Human antisense chr16:31194160 chr16:31194158 . . 0 19 hm5C_associated_SNPs_11644 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr16:31194100-31194160
64251 chr16 31194158 31194158 1 + C G rs185469113 31194161 + 31194141 31194181 41 GATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGG GATTCTCCTGCCTCAGCGTCCTGAGTAGCTGGGATTACAGG < 41bp 1 0.234854975162157 1 0.27725276350975 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUS ENSG00000260304 ncRNA_exonic Human antisense chr16:31194161 chr16:31194158 . . 0 18 hm5C_associated_SNPs_11645 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr16:31194100-31194160
64251 chr16 31194158 31194158 1 + C G rs185469113 31194169 + 31194149 31194189 41 TGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTACCTGCT TGCCTCAGCGTCCTGAGTAGCTGGGATTACAGGTACCTGCT < 41bp 1 0.654158005172086 1 0.636756956577301 experiment 0.691683989655828 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUS ENSG00000260304 ncRNA_exonic Human antisense chr16:31194169 chr16:31194158 . . 0 10 hm5C_associated_SNPs_11646 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr16:31194100-31194160
64251 chr16 31194182 31194182 1 + T C rs112957921 31194169 + 31194149 31194189 41 TGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTACCTGCT TGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCT < 41bp 1 0.643905175484062 1 0.537235379219055 experiment 0.712189649031877 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUS ENSG00000260304 ncRNA_intronic Human antisense chr16:31194169 chr16:31194182 . . 0 34 hm5C_associated_SNPs_11647 0 0 1 PRPF8 POSTAR2 ENCODE chr16:31194175-31194205
64251 chr16 31235548 31235548 1 + G C rs58585879 31235556 + 31235536 31235576 41 GCACCCGAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG GCACCCGAGCCTCGTGGTGTCTTCCTCTGGCCGCCGCGTGG < 41bp 1 0.23917969825173 1 0.058073878288269 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235556 chr16:31235548 synonymous SNV . 0 13 hm5C_associated_SNPs_11648 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31235513-31235568
64251 chr16 31473275 31473275 1 + A G rs35923277 31473271 + 31473251 31473291 41 CTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC CTTCAGTGCATGAAGACAGACAGCGTCCAGAACCGAACGGC < 41bp 1 0.546172006295583 1 0.692781388759613 experiment 0.907655987408835 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31473271 chr16:31473275 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_11650 0 0 4 BUD13 POSTAR2 ENCODE chr16:31473258-31473356
64251 chr16 46723598 46723598 1 + T C rs33994299 46723587 + 46723567 46723607 41 TTTCGTTGACCCGCGGCGTTCACGGGAATTGTTCGCTTTAG TTTCGTTGACCCGCGGCGTTCACGGGAATTGCTCGCTTTAG < 41bp 1 0.798776751302543 1 0.682891964912415 experiment 0.402446497394913 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ORC6 ENSG00000091651 UTR5 Human protein_coding chr16:46723587 chr16:46723598 . . 0 32 hm5C_associated_SNPs_11651 3 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:46723592-46723623
64251 chr16 46963340 46963340 1 + G A rs141523762 46963358 + 46963338 46963378 41 GCGGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGA GCAGTGTGAAGCATCCGGTCCTTTGAACAGAAGGGCCTGGA < 41bp 1 0.112613872524304 1 0.0591235458850861 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46963358 chr16:46963340 . . 0 3 hm5C_associated_SNPs_11652 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:46963302-46963351
64251 chr16 46964980 46964980 1 + G A rs555399992 46964987 + 46964967 46965007 41 TGTAGCATGTGCTGAGGAAGCACGTGCTGGGCTGTGCCTCA TGTAGCATGTGCTAAGGAAGCACGTGCTGGGCTGTGCCTCA < 41bp 1 0.795673904497011 1 0.757289171218872 experiment 0.408652191005977 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46964987 chr16:46964980 . . 0 14 hm5C_associated_SNPs_11653 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr16:46964845-46965091
64251 chr16 46965179 46965179 1 + A G rs8728 46965175 + 46965155 46965195 41 AATGGCTCTGCTGGAAATTTCTATAAATAAAATGTCCAAAA AATGGCTCTGCTGGAAATTTCTATGAATAAAATGTCCAAAA < 41bp 1 0.356266770918189 1 0.420539408922195 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46965175 chr16:46965179 . . 0 25 hm5C_associated_SNPs_11654 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:46965111-46965193
64251 chr16 50139208 50139208 1 + A G rs575562698 50139197 + 50139177 50139217 41 TTGAGGTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGA TTGAGGTCAGGAGTTTGAGGCCAGCCTGGCCGACATGGTGA < 41bp 1 0.45697169148141 1 0.0616526901721954 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139197 chr16:50139208 . . 0 32 hm5C_associated_SNPs_11656 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139208 50139208 1 + A G rs575562698 50139198 + 50139178 50139218 41 TGAGGTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAA TGAGGTCAGGAGTTTGAGGCCAGCCTGGCCGACATGGTGAA < 41bp 1 0.635493798220477 1 0.111322313547134 experiment 0.729012403559045 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139198 chr16:50139208 . . 0 31 hm5C_associated_SNPs_11657 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139208 50139208 1 + A G rs575562698 50139201 + 50139181 50139221 41 GGTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACC GGTCAGGAGTTTGAGGCCAGCCTGGCCGACATGGTGAAACC < 41bp 1 0.586240751256329 1 0.0929961502552032 experiment 0.827518497487343 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139201 chr16:50139208 . . 0 28 hm5C_associated_SNPs_11658 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139208 50139208 1 + A G rs575562698 50139202 + 50139182 50139222 41 GTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCG GTCAGGAGTTTGAGGCCAGCCTGGCCGACATGGTGAAACCG < 41bp 1 0.709140911095467 1 0.281133413314819 experiment 0.581718177809066 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139202 chr16:50139208 . . 0 27 hm5C_associated_SNPs_11659 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139208 50139208 1 + A G rs575562698 50139206 + 50139186 50139226 41 GGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCGCATG GGAGTTTGAGGCCAGCCTGGCCGACATGGTGAAACCGCATG < 41bp 1 0.296840348665414 1 0.0650923848152161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139206 chr16:50139208 . . 0 23 hm5C_associated_SNPs_11660 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139208 50139208 1 + A G rs575562698 50139210 + 50139190 50139230 41 TTTGAGGCCAGCCTGGCCAACATGGTGAAACCGCATGCATA TTTGAGGCCAGCCTGGCCGACATGGTGAAACCGCATGCATA < 41bp 1 0.706973807209025 1 0.111223369836807 experiment 0.586052385581949 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139210 chr16:50139208 . . 0 19 hm5C_associated_SNPs_11661 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr16:50139200-50139220
64251 chr16 50139222 50139222 1 + G A rs116770385 50139202 + 50139182 50139222 41 GTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCG GTCAGGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCA < 41bp 1 0.717841682972067 1 0.36568745970726 experiment 0.564316634055866 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139202 chr16:50139222 . . 0 41 hm5C_associated_SNPs_11662 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:50139220-50139240
64251 chr16 50139222 50139222 1 + G A rs116770385 50139206 + 50139186 50139226 41 GGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCGCATG GGAGTTTGAGGCCAGCCTGGCCAACATGGTGAAACCACATG < 41bp 1 0.194240467996079 1 0.0874258577823639 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139206 chr16:50139222 . . 0 37 hm5C_associated_SNPs_11663 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:50139220-50139240
64251 chr16 50139222 50139222 1 + G A rs116770385 50139210 + 50139190 50139230 41 TTTGAGGCCAGCCTGGCCAACATGGTGAAACCGCATGCATA TTTGAGGCCAGCCTGGCCAACATGGTGAAACCACATGCATA < 41bp 1 0.757595061190163 1 0.123776942491531 experiment 0.484809877619674 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139210 chr16:50139222 . . 0 33 hm5C_associated_SNPs_11664 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:50139220-50139240
64251 chr16 50139789 50139789 1 + C G rs575653767 50139770 + 50139750 50139790 41 GGGATTACAGGCATGAGCCACCGTGCCTGGCCAGAAACTCT GGGATTACAGGCATGAGCCACCGTGCCTGGCCAGAAACTGT < 41bp 1 0.0672339110996547 1 0.635998427867889 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139770 chr16:50139789 . . 0 40 hm5C_associated_SNPs_11668 0 0 7 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr16:50139760-50139800
64251 chr16 50139789 50139789 1 + C G rs575653767 50139771 + 50139751 50139791 41 GGATTACAGGCATGAGCCACCGTGCCTGGCCAGAAACTCTT GGATTACAGGCATGAGCCACCGTGCCTGGCCAGAAACTGTT < 41bp 1 0.143235020033943 1 0.352661907672882 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139771 chr16:50139789 . . 0 39 hm5C_associated_SNPs_11669 0 0 7 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr16:50139760-50139800
64251 chr16 50139789 50139789 1 + C G rs575653767 50139776 + 50139756 50139796 41 ACAGGCATGAGCCACCGTGCCTGGCCAGAAACTCTTTTTTA ACAGGCATGAGCCACCGTGCCTGGCCAGAAACTGTTTTTTA < 41bp 1 0.393843904544438 1 0.110273867845535 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HEATR3 ENSG00000260381 ncRNA_intronic Human antisense chr16:50139776 chr16:50139789 . . 0 34 hm5C_associated_SNPs_11670 0 0 7 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr16:50139760-50139800
64251 chr16 50261755 50261755 1 + C T rs75174826 50261765 + 50261745 50261785 41 GTTAGGATTCCGATGCAACACCATGCAAAACCCCGAAACAG GTTAGGATTCTGATGCAACACCATGCAAAACCCCGAAACAG < 41bp 1 0.256541017553815 1 0.64474630355835 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50261765 chr16:50261755 synonymous SNV . 0 11 hm5C_associated_SNPs_11671 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:50261740-50261760
64251 chr16 50350935 50350935 1 + G A rs112731098 50350918 + 50350898 50350938 41 TGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCGGGC TGACCAGACTTGTTGGGGTCCTGGGATGAGTTGCCCCAGGC < 41bp 1 0.781037664903038 1 0.554748594760895 experiment 0.437924670193925 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADCY7 ENSG00000121281;ENSG00000166164 UTR3 Human other chr16:50350918 chr16:50350935 . . 0 38 hm5C_associated_SNPs_11672 0 0 1 UPF1 POSTAR2 ENCODE chr16:50350906-50350937
64251 chr16 53468630 53468630 1 + C A rs79388287 53468610 + 53468590 53468630 41 CCACCCCTCAGATCCAGCAGCGGTTCGACGAGCTGTGCAGC CCACCCCTCAGATCCAGCAGCGGTTCGACGAGCTGTGCAGA < 41bp 1 0.301970207320388 1 0.351580858230591 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53468610 chr16:53468630 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_11674 0 0 2 FMR1 POSTAR2 ENCODE chr16:53468606-53468684
64251 chr16 53738094 53738094 1 + A G rs199561185 53738107 + 53738087 53738127 41 TAGTGGCAGCATGAAGCGCACCCCGACTGCCGAGGAACGAG TAGTGGCGGCATGAAGCGCACCCCGACTGCCGAGGAACGAG < 41bp 1 0.376841820288506 1 0.33907675743103 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FTO ENSG00000140718 UTR5 Human protein_coding chr16:53738107 chr16:53738094 . . 0 8 hm5C_associated_SNPs_11675 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:53738089-53738111
64251 chr16 53738114 53738114 1 + T C rs73609956 53738107 + 53738087 53738127 41 TAGTGGCAGCATGAAGCGCACCCCGACTGCCGAGGAACGAG TAGTGGCAGCATGAAGCGCACCCCGACCGCCGAGGAACGAG < 41bp 1 0.379662520612815 1 0.386025726795197 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FTO ENSG00000140718 CDS Human protein_coding chr16:53738107 chr16:53738114 synonymous SNV . 0 28 hm5C_associated_SNPs_11676 4 0 2 GRWD1 POSTAR2 ENCODE chr16:53738075-53738172
64251 chr16 54147993 54147993 1 + G A rs534016099 54148002 + 54147982 54148022 41 CTGGGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCT CTGGGATTACAAGCGTGAGCCACCGCGCCAAGCCAAGGTCT < 41bp 1 0.703531737807258 1 0.499335676431656 experiment 0.592936524385484 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148002 chr16:54147993 . . 0 12 hm5C_associated_SNPs_11677 0 0 1 IGF2BP1 POSTAR2 ENCODE chr16:54147950-54148030
64251 chr16 54147993 54147993 1 + G A rs534016099 54148004 + 54147984 54148024 41 GGGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCTGC GGGATTACAAGCGTGAGCCACCGCGCCAAGCCAAGGTCTGC < 41bp 1 0.47897226532937 1 0.108999371528625 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148004 chr16:54147993 . . 0 10 hm5C_associated_SNPs_11678 0 0 1 IGF2BP1 POSTAR2 ENCODE chr16:54147950-54148030
64251 chr16 54147993 54147993 1 + G A rs534016099 54148005 + 54147985 54148025 41 GGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCTGCA GGATTACAAGCGTGAGCCACCGCGCCAAGCCAAGGTCTGCA < 41bp 1 0.605237036306788 1 0.304873883724213 experiment 0.789525927386424 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148005 chr16:54147993 . . 0 9 hm5C_associated_SNPs_11679 0 0 1 IGF2BP1 POSTAR2 ENCODE chr16:54147950-54148030
64251 chr16 54148007 54148007 1 + C T rs147409759 54147995 + 54147975 54148015 41 CAAAGCGCTGGGATTACAGGCGTGAGCCACCGCGCCAAGCC CAAAGCGCTGGGATTACAGGCGTGAGCCACCGTGCCAAGCC < 41bp 1 0.796845891560235 1 0.30267271399498 experiment 0.406308216879529 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54147995 chr16:54148007 . . 0 33 hm5C_associated_SNPs_11680 1 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:54148000-54148036
64251 chr16 54148007 54148007 1 + C T rs147409759 54148002 + 54147982 54148022 41 CTGGGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCT CTGGGATTACAGGCGTGAGCCACCGTGCCAAGCCAAGGTCT < 41bp 1 0.762383350627034 1 0.667977571487427 experiment 0.475233298745933 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148002 chr16:54148007 . . 0 26 hm5C_associated_SNPs_11681 1 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:54148000-54148036
64251 chr16 54148007 54148007 1 + C T rs147409759 54148004 + 54147984 54148024 41 GGGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCTGC GGGATTACAGGCGTGAGCCACCGTGCCAAGCCAAGGTCTGC < 41bp 1 0.332791662972315 1 0.162657856941223 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148004 chr16:54148007 . . 0 24 hm5C_associated_SNPs_11682 1 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:54148000-54148036
64251 chr16 54148007 54148007 1 + C T rs147409759 54148005 + 54147985 54148025 41 GGATTACAGGCGTGAGCCACCGCGCCAAGCCAAGGTCTGCA GGATTACAGGCGTGAGCCACCGTGCCAAGCCAAGGTCTGCA < 41bp 1 0.437310372819705 1 0.275184869766235 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FTO ENSG00000214696 ncRNA_exonic Human other chr16:54148005 chr16:54148007 . . 0 23 hm5C_associated_SNPs_11683 1 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:54148000-54148036
64251 chr16 55543050 55543050 1 + G T rs150333127 55543062 + 55543042 55543082 41 GCTGCAGCGCCCGCGTAGATCGCTTCGGCCGGGTTCTACGC GCTGCAGCTCCCGCGTAGATCGCTTCGGCCGGGTTCTACGC < 41bp 1 0.651485076824409 1 0.0963338613510132 experiment 0.697029846351181 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LPCAT2 ENSG00000087253 UTR5 Human protein_coding chr16:55543062 chr16:55543050 . . 0 9 hm5C_associated_SNPs_11688 0 0 4 DDX3X POSTAR2 ENCODE chr16:55542985-55543162
64251 chr16 55543073 55543073 1 + G C rs17302903 55543062 + 55543042 55543082 41 GCTGCAGCGCCCGCGTAGATCGCTTCGGCCGGGTTCTACGC GCTGCAGCGCCCGCGTAGATCGCTTCGGCCGCGTTCTACGC < 41bp 1 0.671719772618354 1 0.106618076562881 experiment 0.656560454763291 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LPCAT2 ENSG00000087253 UTR5 Human protein_coding chr16:55543062 chr16:55543073 . . 0 32 hm5C_associated_SNPs_11689 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:55543060-55543080
64251 chr16 56659783 56659783 1 + G A rs141266321 56659789 + 56659769 56659809 41 CCCCAACTGCTCTTGCGCCACTGGTAAGGGAAGCTCTGCGC CCCCAACTGCTCTTACGCCACTGGTAAGGGAAGCTCTGCGC < 41bp 1 0.654370217915567 1 0.297144025564194 experiment 0.691259564168866 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56659789 chr16:56659783 nonsynonymous SNV 0.986 1 15 hm5C_associated_SNPs_11690 0 0 9 DDX3X POSTAR2 ENCODE chr16:56659709-56659789
64251 chr16 56660906 56660906 1 + G T rs708274 56660892 + 56660872 56660912 41 TGCTGTGCCTGATGTGGGAACAGCTCTTCTCCCAGATGTAA TGCTGTGCCTGATGTGGGAACAGCTCTTCTCCCATATGTAA < 41bp 1 0.483069576179489 1 0.260388344526291 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MT1E ENSG00000169715 UTR3 Human protein_coding chr16:56660892 chr16:56660906 . . 0 35 hm5C_associated_SNPs_11693 0 0 4 LARP4 POSTAR2 ENCODE chr16:56660874-56660922
64251 chr16 56660906 56660906 1 + G T rs708274 56660895 + 56660875 56660915 41 TGTGCCTGATGTGGGAACAGCTCTTCTCCCAGATGTAAATA TGTGCCTGATGTGGGAACAGCTCTTCTCCCATATGTAAATA < 41bp 1 0.313658936378344 1 0.179784297943115 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MT1E ENSG00000169715 UTR3 Human protein_coding chr16:56660895 chr16:56660906 . . 0 32 hm5C_associated_SNPs_11694 0 0 4 LARP4 POSTAR2 ENCODE chr16:56660874-56660922
64251 chr16 56966071 56966071 1 + T C rs37024 56966070 + 56966050 56966090 41 GCGCGCCCCAGAGACGTGAACTGTCGTTGCAGAGATTGCGG GCGCGCCCCAGAGACGTGAACCGTCGTTGCAGAGATTGCGG < 41bp 1 0.332631237036373 1 0.23581463098526 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HERPUD1 ENSG00000051108 UTR5 Human protein_coding chr16:56966070 chr16:56966071 . . 0 22 hm5C_associated_SNPs_11695 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr16:56966068-56966099
64251 chr16 56966072 56966072 1 + G C rs531852378 56966070 + 56966050 56966090 41 GCGCGCCCCAGAGACGTGAACTGTCGTTGCAGAGATTGCGG GCGCGCCCCAGAGACGTGAACTCTCGTTGCAGAGATTGCGG < 41bp 1 0.428457886147887 1 0.273560881614685 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HERPUD1 ENSG00000051108 UTR5 Human protein_coding chr16:56966070 chr16:56966072 . . 0 23 hm5C_associated_SNPs_11696 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr16:56966068-56966099
64251 chr16 56966079 56966079 1 + C T rs571539038 56966070 + 56966050 56966090 41 GCGCGCCCCAGAGACGTGAACTGTCGTTGCAGAGATTGCGG GCGCGCCCCAGAGACGTGAACTGTCGTTGTAGAGATTGCGG < 41bp 1 0.496936054207373 1 0.232809841632843 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HERPUD1 ENSG00000051108 UTR5 Human protein_coding chr16:56966070 chr16:56966079 . . 0 30 hm5C_associated_SNPs_11697 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr16:56966068-56966099
64251 chr16 57126540 57126540 1 + G A rs561444256 57126558 + 57126538 57126578 41 TGGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGC TGAGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGC < 41bp 1 0.638950149262687 1 0.294661104679108 experiment 0.722099701474626 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 UTR5 Human protein_coding chr16:57126558 chr16:57126540 . . 0 3 hm5C_associated_SNPs_11698 0 0 1 DDX3X POSTAR2 ENCODE chr16:57126521-57126626
64251 chr16 57126540 57126540 1 + G A rs561444256 57126559 + 57126539 57126579 41 GGGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCC GAGAGCGCACGCGAGCGGGCCGTGGCCGCGCGGGCAGCGCC < 41bp 1 0.740896159435471 1 0.399271965026855 experiment 0.518207681129059 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 UTR5 Human protein_coding chr16:57126559 chr16:57126540 . . 0 2 hm5C_associated_SNPs_11699 0 0 1 DDX3X POSTAR2 ENCODE chr16:57126521-57126626
64251 chr16 57286491 57286491 1 + C T rs370149749 57286486 + 57286466 57286506 41 CTCCACCTGGGGGGCCCTTCCCCAGCATACCTGCTGGTGTG CTCCACCTGGGGGGCCCTTCCCCAGTATACCTGCTGGTGTG < 41bp 1 0.760050409463513 1 0.83372962474823 experiment 0.479899181072974 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ARL2BP ENSG00000260946 ncRNA_exonic Human other chr16:57286486 chr16:57286491 . . 0 26 hm5C_associated_SNPs_11700 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57286458-57286519
64251 chr16 57286491 57286491 1 + C T rs370149749 57286487 + 57286467 57286507 41 TCCACCTGGGGGGCCCTTCCCCAGCATACCTGCTGGTGTGT TCCACCTGGGGGGCCCTTCCCCAGTATACCTGCTGGTGTGT < 41bp 1 0.743605994793433 1 0.700554013252258 experiment 0.512788010413134 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ARL2BP ENSG00000260946 ncRNA_exonic Human other chr16:57286487 chr16:57286491 . . 0 25 hm5C_associated_SNPs_11701 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57286458-57286519
64251 chr16 57333890 57333890 1 + C G rs184840621 57333873 + 57333853 57333893 41 CTCCTAGGAAGTCAGGATGGCCGAGCGGTCTAAGGCGCTGC CTCCTAGGAAGTCAGGATGGCCGAGCGGTCTAAGGCGGTGC < 41bp 1 0.347919511517351 1 0.121493428945541 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333873 chr16:57333890 . . 0 38 hm5C_associated_SNPs_11702 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333890 57333890 1 + C G rs184840621 57333874 + 57333854 57333894 41 TCCTAGGAAGTCAGGATGGCCGAGCGGTCTAAGGCGCTGCG TCCTAGGAAGTCAGGATGGCCGAGCGGTCTAAGGCGGTGCG < 41bp 1 0.537600489772472 1 0.728274345397949 experiment 0.924799020455056 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333874 chr16:57333890 . . 0 37 hm5C_associated_SNPs_11703 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333890 57333890 1 + C G rs184840621 57333893 + 57333873 57333913 41 CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCC CCGAGCGGTCTAAGGCGGTGCGTTCAGGTCGCAGTCTCCCC < 41bp 1 0.0653614220581025 1 0.039654940366745 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333893 chr16:57333890 . . 0 18 hm5C_associated_SNPs_11704 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333890 57333890 1 + C G rs184840621 57333897 + 57333877 57333917 41 GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGA GCGGTCTAAGGCGGTGCGTTCAGGTCGCAGTCTCCCCTGGA < 41bp 1 0.740004909551569 1 0.91265881061554 experiment 0.519990180896863 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333897 chr16:57333890 . . 0 14 hm5C_associated_SNPs_11705 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333890 57333890 1 + C G rs184840621 57333904 + 57333884 57333924 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGGTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG < 41bp 1 0.23576329427367 1 0.183544456958771 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333904 chr16:57333890 . . 0 7 hm5C_associated_SNPs_11706 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333890 57333890 1 + C G rs184840621 57333908 + 57333888 57333928 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGGTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC < 41bp 1 0.532763153599004 1 0.769119024276733 experiment 0.934473692801992 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333908 chr16:57333890 . . 0 3 hm5C_associated_SNPs_11707 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:57333857-57333891
64251 chr16 57333902 57333902 1 + C G rs149619861 57333890 + 57333870 57333910 41 TGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTC TGGCCGAGCGGTCTAAGGCGCTGCGTTCAGGTGGCAGTCTC < 41bp 1 0.75381500824466 1 0.217775523662567 experiment 0.49236998351068 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333890 chr16:57333902 . . 0 33 hm5C_associated_SNPs_11708 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333893 + 57333873 57333913 41 CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCC CCGAGCGGTCTAAGGCGCTGCGTTCAGGTGGCAGTCTCCCC < 41bp 1 0.0638421632036579 1 0.0848139524459839 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333893 chr16:57333902 . . 0 30 hm5C_associated_SNPs_11709 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333897 + 57333877 57333917 41 GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGA GCGGTCTAAGGCGCTGCGTTCAGGTGGCAGTCTCCCCTGGA < 41bp 1 0.792058434911863 1 0.950957179069519 experiment 0.415883130176274 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333897 chr16:57333902 . . 0 26 hm5C_associated_SNPs_11710 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333904 + 57333884 57333924 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGCTGCGTTCAGGTGGCAGTCTCCCCTGGAGGCGTGG < 41bp 1 0.191170061329223 1 0.216980516910553 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333904 chr16:57333902 . . 0 19 hm5C_associated_SNPs_11711 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333908 + 57333888 57333928 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGCTGCGTTCAGGTGGCAGTCTCCCCTGGAGGCGTGGGTTC < 41bp 1 0.518318767457642 1 0.818956792354584 experiment 0.963362465084715 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333908 chr16:57333902 . . 0 15 hm5C_associated_SNPs_11712 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333911 + 57333891 57333931 41 TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAA TGCGTTCAGGTGGCAGTCTCCCCTGGAGGCGTGGGTTCGAA < 41bp 1 0.305553420600832 1 0.24489238858223 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333911 chr16:57333902 . . 0 12 hm5C_associated_SNPs_11713 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333912 + 57333892 57333932 41 GCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT GCGTTCAGGTGGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT < 41bp 1 0.371512208435152 1 0.236252754926682 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333912 chr16:57333902 . . 0 11 hm5C_associated_SNPs_11714 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333902 57333902 1 + C G rs149619861 57333920 + 57333900 57333940 41 GTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTC GTGGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTC < 41bp 1 0.799778187785531 1 0.628301620483398 experiment 0.400443624428938 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333920 chr16:57333902 . . 0 3 hm5C_associated_SNPs_11715 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333893 + 57333873 57333913 41 CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCC CCGAGCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCACC < 41bp 1 0.0480079682138938 1 0.0629796981811523 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333893 chr16:57333911 . . 0 39 hm5C_associated_SNPs_11716 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333897 + 57333877 57333917 41 GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGA GCGGTCTAAGGCGCTGCGTTCAGGTCGCAGTCTCACCTGGA < 41bp 1 0.653488409565306 1 0.882558465003967 experiment 0.693023180869389 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333897 chr16:57333911 . . 0 35 hm5C_associated_SNPs_11717 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333904 + 57333884 57333924 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGCTGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGG < 41bp 1 0.222995960193701 1 0.146806240081787 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333904 chr16:57333911 . . 0 28 hm5C_associated_SNPs_11718 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333908 + 57333888 57333928 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGCTGCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTC < 41bp 1 0.459608990687626 1 0.469691693782806 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333908 chr16:57333911 . . 0 24 hm5C_associated_SNPs_11719 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333912 + 57333892 57333932 41 GCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT GCGTTCAGGTCGCAGTCTCACCTGGAGGCGTGGGTTCGAAT < 41bp 1 0.348542809922303 1 0.110544770956039 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333912 chr16:57333911 . . 0 20 hm5C_associated_SNPs_11720 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333920 + 57333900 57333940 41 GTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTC GTCGCAGTCTCACCTGGAGGCGTGGGTTCGAATCCCACTTC < 41bp 1 0.762836816851251 1 0.557359039783478 experiment 0.474326366297498 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333920 chr16:57333911 . . 0 12 hm5C_associated_SNPs_11721 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333911 57333911 1 + C A rs144318503 57333928 + 57333908 57333948 41 CTCCCCTGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGC CTCACCTGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGC < 41bp 1 0.244314495925175 1 0.376599043607712 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333928 chr16:57333911 . . 0 4 hm5C_associated_SNPs_11722 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333904 + 57333884 57333924 41 AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGG AAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCATGG < 41bp 1 0.213325022122144 1 0.141841113567352 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333904 chr16:57333921 . . 0 38 hm5C_associated_SNPs_11723 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333908 + 57333888 57333928 41 CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTC CGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCATGGGTTC < 41bp 1 0.492822818699671 1 0.731073439121246 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333908 chr16:57333921 . . 0 34 hm5C_associated_SNPs_11724 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333911 + 57333891 57333931 41 TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAA TGCGTTCAGGTCGCAGTCTCCCCTGGAGGCATGGGTTCGAA < 41bp 1 0.313468077111602 1 0.148237019777298 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333911 chr16:57333921 . . 0 31 hm5C_associated_SNPs_11725 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333912 + 57333892 57333932 41 GCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAAT GCGTTCAGGTCGCAGTCTCCCCTGGAGGCATGGGTTCGAAT < 41bp 1 0.334037942860056 1 0.164517343044281 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333912 chr16:57333921 . . 0 30 hm5C_associated_SNPs_11726 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333920 + 57333900 57333940 41 GTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCCCACTTC GTCGCAGTCTCCCCTGGAGGCATGGGTTCGAATCCCACTTC < 41bp 1 0.749362525364808 1 0.427567988634109 experiment 0.501274949270383 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333920 chr16:57333921 . . 0 22 hm5C_associated_SNPs_11727 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333928 + 57333908 57333948 41 CTCCCCTGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGC CTCCCCTGGAGGCATGGGTTCGAATCCCACTTCTGACAAGC < 41bp 1 0.205433044799702 1 0.212177813053131 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333928 chr16:57333921 . . 0 14 hm5C_associated_SNPs_11728 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333934 + 57333914 57333954 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTT TGGAGGCATGGGTTCGAATCCCACTTCTGACAAGCGCTCTT < 41bp 1 0.183307139334433 1 0.0906756222248077 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333934 chr16:57333921 . . 0 8 hm5C_associated_SNPs_11729 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333935 + 57333915 57333955 41 GGAGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTTT GGAGGCATGGGTTCGAATCCCACTTCTGACAAGCGCTCTTT < 41bp 1 0.359804419690033 1 0.0333499908447266 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333935 chr16:57333921 . . 0 7 hm5C_associated_SNPs_11730 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333921 57333921 1 + G A rs577579670 57333937 + 57333917 57333957 41 AGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTTTTC AGGCATGGGTTCGAATCCCACTTCTGACAAGCGCTCTTTTC < 41bp 1 0.192359676823095 1 0.0961734056472778 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333937 chr16:57333921 . . 0 5 hm5C_associated_SNPs_11731 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333936 57333936 1 + A C rs142778319 57333928 + 57333908 57333948 41 CTCCCCTGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGC CTCCCCTGGAGGCGTGGGTTCGAATCCCCCTTCTGACAAGC < 41bp 1 0.259737733944342 1 0.255398392677307 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333928 chr16:57333936 . . 0 29 hm5C_associated_SNPs_11732 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333936 57333936 1 + A C rs142778319 57333934 + 57333914 57333954 41 TGGAGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTT TGGAGGCGTGGGTTCGAATCCCCCTTCTGACAAGCGCTCTT < 41bp 1 0.24236218575227 1 0.13949516415596 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333934 chr16:57333936 . . 0 23 hm5C_associated_SNPs_11733 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333936 57333936 1 + A C rs142778319 57333935 + 57333915 57333955 41 GGAGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTTT GGAGGCGTGGGTTCGAATCCCCCTTCTGACAAGCGCTCTTT < 41bp 1 0.138301941840272 1 0.0178512334823608 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333935 chr16:57333936 . . 0 22 hm5C_associated_SNPs_11734 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57333936 57333936 1 + A C rs142778319 57333937 + 57333917 57333957 41 AGGCGTGGGTTCGAATCCCACTTCTGACAAGCGCTCTTTTC AGGCGTGGGTTCGAATCCCCCTTCTGACAAGCGCTCTTTTC < 41bp 1 0.203209248193275 1 0.12704473733902 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLLP;CCL22 ENSG00000102934;ENSG00000260965 intergenic Human other chr16:57333937 chr16:57333936 . . 0 20 hm5C_associated_SNPs_11735 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:57333899-57333956
64251 chr16 57486788 57486788 1 + A C rs567112416 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCCGCCCTT < 41bp 1 0.672641238658694 1 0.881620585918427 experiment 0.654717522682613 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486788 synonymous SNV . 0 35 hm5C_associated_SNPs_11736 0 0 4 BUD13 POSTAR2 ENCODE chr16:57486763-57486834
64251 chr16 57494635 57494635 1 + A G rs111229926 57494618 + 57494598 57494638 41 GAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGA GAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCGCGA < 41bp 1 0.177832188884018 1 0.397031456232071 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COQ9 ENSG00000088682 UTR3 Human protein_coding chr16:57494618 chr16:57494635 . . 0 38 hm5C_associated_SNPs_11737 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:57494604-57494636
64251 chr16 57494636 57494636 1 + C T rs373048666 57494618 + 57494598 57494638 41 GAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCACGA GAAAAGTATAAGGTGCCATCCACATAACCTGGTGTTCATGA < 41bp 1 0.160338179036455 1 0.204910606145859 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COQ9 ENSG00000088682 UTR3 Human protein_coding chr16:57494618 chr16:57494636 . . 0 39 hm5C_associated_SNPs_11738 1 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:57494604-57494636
64251 chr16 57685221 57685221 1 + C G rs140963173 57685240 + 57685220 57685260 41 TCGAGAACTCCGAAGAGGCCCTCACAGTCCATGCCCCTTTC TGGAGAACTCCGAAGAGGCCCTCACAGTCCATGCCCCTTTC < 41bp 1 0.304641530155635 1 0.0617262125015259 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57685240 chr16:57685221 nonsynonymous SNV 0.002 3 2 hm5C_associated_SNPs_11740 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:57685220-57685240
64251 chr16 57786711 57786711 1 + C T rs2965798 57786697 + 57786677 57786717 41 TCGCCTGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGC TCGCCTGGCCCAGGAGCGTCCTCTTCAACCCAGATGGCTGC < 41bp 1 0.176661822376974 1 0.109075009822845 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786697 chr16:57786711 synonymous SNV . 0 35 hm5C_associated_SNPs_11741 0 0 1 PPIG POSTAR2 ENCODE chr16:57786704-57786734
64251 chr16 57786711 57786711 1 + C T rs2965798 57786702 + 57786682 57786722 41 TGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGCTGCCT TGGCCCAGGAGCGTCCTCTTCAACCCAGATGGCTGCTGCCT < 41bp 1 0.363713873922449 1 0.131605178117752 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786702 chr16:57786711 synonymous SNV . 0 30 hm5C_associated_SNPs_11742 0 0 1 PPIG POSTAR2 ENCODE chr16:57786704-57786734
64251 chr16 58059898 58059898 1 + A G rs538106981 58059914 + 58059894 58059934 41 GCGCAGGGAGCGCCGCGGGACCGGGCGGCCGGAGCGCTGAG GCGCGGGGAGCGCCGCGGGACCGGGCGGCCGGAGCGCTGAG < 41bp 1 0.737209039571897 1 0.456222295761108 experiment 0.525581920856205 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MMP15 ENSG00000102996 UTR5 Human protein_coding chr16:58059914 chr16:58059898 . . 0 5 hm5C_associated_SNPs_11743 0 0 7 DDX3X POSTAR2 ENCODE chr16:58059877-58059940
64251 chr16 58060112 58060112 1 + G C rs189995509 58060105 + 58060085 58060125 41 TCCTCGGGCTTGGGAATTTGCCGAGGCGACCTAGGCGGCTC TCCTCGGGCTTGGGAATTTGCCGAGGCCACCTAGGCGGCTC < 41bp 1 0.729327534582661 1 0.733921349048615 experiment 0.541344930834677 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MMP15 ENSG00000102996 UTR5 Human protein_coding chr16:58060105 chr16:58060112 . . 0 28 hm5C_associated_SNPs_11744 0 0 3 DDX3X POSTAR2 ENCODE chr16:58060099-58060185
64251 chr16 58060112 58060112 1 + G C rs189995509 58060106 + 58060086 58060126 41 CCTCGGGCTTGGGAATTTGCCGAGGCGACCTAGGCGGCTCC CCTCGGGCTTGGGAATTTGCCGAGGCCACCTAGGCGGCTCC < 41bp 1 0.777590108758681 1 0.966463387012482 experiment 0.444819782482639 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MMP15 ENSG00000102996 UTR5 Human protein_coding chr16:58060106 chr16:58060112 . . 0 27 hm5C_associated_SNPs_11745 0 0 3 DDX3X POSTAR2 ENCODE chr16:58060099-58060185
64251 chr16 58079268 58079268 1 + C T rs141377329 58079249 + 58079229 58079269 41 TGGTGCCACTGCTGCTGCTGCTCTGCGTCCTGGGCCTCACC TGGTGCCACTGCTGCTGCTGCTCTGCGTCCTGGGCCTCATC < 41bp 1 0.18224769209396 1 0.102005928754807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMP15 ENSG00000102996 CDS Human protein_coding chr16:58079249 chr16:58079268 nonsynonymous SNV 0.007 0 40 hm5C_associated_SNPs_11746 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:58079233-58079272
64251 chr16 58079642 58079642 1 + G T rs553292764 58079636 + 58079616 58079656 41 ATCCTCTGGCTTGGCCACAGCCAGGGGAGCAGAGGGGCAGA ATCCTCTGGCTTGGCCACAGCCAGGGTAGCAGAGGGGCAGA < 41bp 1 0.535140234519853 1 0.749111294746399 experiment 0.929719530960294 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MMP15 ENSG00000102996 UTR3 Human protein_coding chr16:58079636 chr16:58079642 . . 0 27 hm5C_associated_SNPs_11747 0 0 3 DDX55 POSTAR2 ENCODE chr16:58079587-58079668
64251 chr16 58079642 58079642 1 + G T rs553292764 58079637 + 58079617 58079657 41 TCCTCTGGCTTGGCCACAGCCAGGGGAGCAGAGGGGCAGAG TCCTCTGGCTTGGCCACAGCCAGGGTAGCAGAGGGGCAGAG < 41bp 1 0.786119484468506 1 0.900386810302734 experiment 0.427761031062988 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MMP15 ENSG00000102996 UTR3 Human protein_coding chr16:58079637 chr16:58079642 . . 0 26 hm5C_associated_SNPs_11748 0 0 3 DDX55 POSTAR2 ENCODE chr16:58079587-58079668
64251 chr16 58079642 58079642 1 + G T rs553292764 58079661 + 58079641 58079681 41 GGAGCAGAGGGGCAGAGGCCCACATTGGAAGAGCAGCACCT GTAGCAGAGGGGCAGAGGCCCACATTGGAAGAGCAGCACCT < 41bp 1 0.33336560300808 1 0.506043672561646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MMP15 ENSG00000102996 UTR3 Human protein_coding chr16:58079661 chr16:58079642 . . 0 2 hm5C_associated_SNPs_11749 0 0 3 DDX55 POSTAR2 ENCODE chr16:58079587-58079668
64251 chr16 58080525 58080525 1 + C G rs557928662 58080519 + 58080499 58080539 41 TTCCCAAAGCAAGCAAGAGGCCGTGGCTGCTGTGGGAAATG TTCCCAAAGCAAGCAAGAGGCCGTGGGTGCTGTGGGAAATG < 41bp 1 0.14523648256226 1 0.206867188215256 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MMP15 ENSG00000102996 UTR3 Human protein_coding chr16:58080519 chr16:58080525 . . 0 27 hm5C_associated_SNPs_11750 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:58080513-58080539
64251 chr16 66920758 66920758 1 + G C rs576539581 66920738 + 66920718 66920758 41 ATTCACCCTGCACCTGCCAACTGCAAAATATTGTCTGAAAG ATTCACCCTGCACCTGCCAACTGCAAAATATTGTCTGAAAC < 41bp 1 0.738504871206366 1 0.655861675739288 experiment 0.522990257587268 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDP2 ENSG00000172840 UTR3 Human protein_coding chr16:66920738 chr16:66920758 . . 0 41 hm5C_associated_SNPs_11752 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:66920758-66920759
64251 chr16 66968700 66968700 1 + G A rs563621668 66968706 + 66968686 66968726 41 CCGGTGACGCGCCTGCCTCCCCTGCTGCACCATAGGCCCGG CCGGTGACGCGCCTACCTCCCCTGCTGCACCATAGGCCCGG < 41bp 1 0.103917411690421 1 0.147266626358032 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CES2 ENSG00000172831 UTR5 Human protein_coding chr16:66968706 chr16:66968700 . . 0 15 hm5C_associated_SNPs_11756 0 0 4 DDX3X POSTAR2 ENCODE chr16:66968604-66968713
64251 chr16 66998552 66998552 1 + G A rs147731637 66998564 + 66998544 66998584 41 GCAGGGCTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT GCAGGGCTATTCCACAGAGCCATCACACAGAGTGGGGTCAT < 41bp 1 0.3761578287227 1 0.0966837406158447 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66998564 chr16:66998552 synonymous SNV . 0 9 hm5C_associated_SNPs_11757 0 0 1 PPIG POSTAR2 ENCODE chr16:66998524-66998563
64251 chr16 67006793 67006793 1 + A G rs71649614 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAGTTCAACCAGGCGGAACAATATCTGGAGATCAACCCA < 41bp 1 0.285833356834577 1 0.285962343215942 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006793 synonymous SNV . 0 5 hm5C_associated_SNPs_11758 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr16 67314358 67314358 1 + G A rs61743439 67314349 + 67314329 67314369 41 GTAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTGGCTT GTAGGGGACCCAGGTCCAAGCAGGGCGATACCATCTGGCTT < 41bp 1 0.766169616592932 1 0.918499350547791 experiment 0.467660766814137 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67314349 chr16:67314358 nonsynonymous SNV 0.003 0 30 hm5C_associated_SNPs_11760 0 0 1 BUD13 POSTAR2 ENCODE chr16:67314321-67314380
64251 chr16 67316192 67316192 1 + G A rs147395532 67316185 + 67316165 67316205 41 GGCTGGCATGGCTACAATGCCAGGGGGGCCGGGAGCTGACA GGCTGGCATGGCTACAATGCCAGGGGGACCGGGAGCTGACA < 41bp 1 0.740012413932068 1 0.938367486000061 experiment 0.519975172135864 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67316185 chr16:67316192 nonsynonymous SNV 0.484 0 28 hm5C_associated_SNPs_11761 0 0 1 PPIG POSTAR2 ENCODE chr16:67316176-67316214
64251 chr16 67578982 67578982 1 + C T rs150695752 67578992 + 67578972 67579012 41 CAGTATGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC CAGTATGGTGTCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC < 41bp 1 0.106208904221762 1 0.174777865409851 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578992 chr16:67578982 nonsynonymous SNV 0.993 1 11 hm5C_associated_SNPs_11766 0 0 2 LSM11 POSTAR2 ENCODE chr16:67578976-67579021
64251 chr16 67876466 67876466 1 + C G rs79492531 67876451 + 67876431 67876471 41 GGCCGGGCCGGGCCGCGCGGCGCAGCCATGCCTGGCTTTAC GGCCGGGCCGGGCCGCGCGGCGCAGCCATGCCTGGGTTTAC < 41bp 1 0.628128539496365 1 0.339453458786011 experiment 0.743742921007271 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control THAP11 ENSG00000168286 CDS Human protein_coding chr16:67876451 chr16:67876466 synonymous SNV . 0 36 hm5C_associated_SNPs_11769 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:67876460-67876480
64251 chr16 68105011 68105011 1 + C A rs148423881 68104994 + 68104974 68105014 41 GGCCCCTGGAGGAGGTCATGCAGAAATACATCAGATACGTA GGCCCCTGGAGGAGGTCATGCAGAAATACATCAGATAAGTA < 41bp 1 0.572805738382537 1 0.334082067012787 experiment 0.854388523234927 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104994 chr16:68105011 stopgain 0.666 1 38 hm5C_associated_SNPs_11770 0 0 1 PRPF8 POSTAR2 ENCODE chr16:68105009-68105038
64251 chr16 68119555 68119555 1 + G A rs3743735 68119538 + 68119518 68119558 41 GCTGCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAG GCTGCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAG < 41bp 1 0.499658791183043 1 0.44038599729538 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119538 chr16:68119555 . . 0 38 hm5C_associated_SNPs_11771 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68119555 68119555 1 + G A rs3743735 68119539 + 68119519 68119559 41 CTGCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGG CTGCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAGG < 41bp 1 0.78391897501983 1 0.758573710918427 experiment 0.432162049960339 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119539 chr16:68119555 . . 0 37 hm5C_associated_SNPs_11772 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68119555 68119555 1 + G A rs3743735 68119541 + 68119521 68119561 41 GCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGGAG GCCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAGGAG < 41bp 1 0.436700681099571 1 0.513695001602173 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119541 chr16:68119555 . . 0 35 hm5C_associated_SNPs_11773 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68119555 68119555 1 + G A rs3743735 68119542 + 68119522 68119562 41 CCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGGAGC CCGCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAGGAGC < 41bp 1 0.667995015782868 1 0.753646850585938 experiment 0.664009968434264 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119542 chr16:68119555 . . 0 34 hm5C_associated_SNPs_11774 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68119555 68119555 1 + G A rs3743735 68119544 + 68119524 68119564 41 GCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGGAGCTG GCCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAGGAGCTG < 41bp 1 0.453580766993755 1 0.706261277198792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119544 chr16:68119555 . . 0 32 hm5C_associated_SNPs_11775 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68119555 68119555 1 + G A rs3743735 68119545 + 68119525 68119565 41 CCGCTTGCCGCTGCCGCCGCCGCCGCCTGAGGAGGAGCTGC CCGCTTGCCGCTGCCGCCGCCGCCGCCTGAAGAGGAGCTGC < 41bp 1 0.708649369534897 1 0.811989784240723 experiment 0.582701260930205 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFATC3 ENSG00000261864 ncRNA_intronic Human processed_transcript chr16:68119545 chr16:68119555 . . 0 31 hm5C_associated_SNPs_11776 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68119555-68119588
64251 chr16 68331171 68331171 1 + T C rs143248146 68331160 + 68331140 68331180 41 CTATCACCAGAGGCACCCAGCAGCTTTGCTTTTGTGTCCTG CTATCACCAGAGGCACCCAGCAGCTTTGCTTCTGTGTCCTG < 41bp 1 0.412643987869498 1 0.227051466703415 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68331160 chr16:68331171 synonymous SNV . 0 32 hm5C_associated_SNPs_11777 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:68331160-68331180
64251 chr16 68373350 68373350 1 + C T rs201449196 68373342 + 68373322 68373362 41 TGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTT TGCAGACCAGCCTCGGAGAGCAGGTCATTGTCCCTCCCGTT < 41bp 1 0.5992577571163 1 0.67976450920105 experiment 0.801484485767399 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373342 chr16:68373350 synonymous SNV . 0 29 hm5C_associated_SNPs_11778 0 0 3 LIN28B POSTAR2 ENCODE chr16:68373297-68373388
64251 chr16 68390993 68390993 1 + G A rs143131470 68390977 + 68390957 68390997 41 GGGGGCTGCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTA GGGGGCTGCTGCTGGAACCCCCACTGCAAGCAGGCCATCTA < 41bp 1 0.205427851301894 1 0.290209114551544 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390977 chr16:68390993 nonsynonymous SNV 0.941 4 37 hm5C_associated_SNPs_11779 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:68390980-68391000
64251 chr16 68390993 68390993 1 + G A rs143131470 68391008 + 68390988 68391028 41 AGGCCGTCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCA AGGCCATCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCA < 41bp 1 0.0752364300440326 1 0.116536527872086 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68391008 chr16:68390993 nonsynonymous SNV 0.941 4 6 hm5C_associated_SNPs_11780 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:68390980-68391000
64251 chr16 69358684 69358684 1 + T C rs140117270 69358694 + 69358674 69358714 41 TGAGAGCAGATTGGCTGATGCCCCTGCAACCCCAGCCCAAG TGAGAGCAGACTGGCTGATGCCCCTGCAACCCCAGCCCAAG < 41bp 1 0.467059131380934 1 0.0681805014610291 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS4A ENSG00000132612 UTR3 Human protein_coding chr16:69358694 chr16:69358684 . . 0 11 hm5C_associated_SNPs_11788 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr16:69358661-69358690
64251 chr16 69496677 69496677 1 + T G rs546818684 69496665 + 69496645 69496685 41 TTGCCGGTGTTTCCTCTCTTCACTGGTTTCCATGAGTACCC TTGCCGGTGTTTCCTCTCTTCACTGGTTTCCAGGAGTACCC < 41bp 1 0.594251222952161 1 0.293391048908234 experiment 0.811497554095678 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYB5B ENSG00000103018 UTR3 Human protein_coding chr16:69496665 chr16:69496677 . . 0 33 hm5C_associated_SNPs_11789 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:69496622-69496678
64251 chr16 69496677 69496677 1 + T G rs546818684 69496667 + 69496647 69496687 41 GCCGGTGTTTCCTCTCTTCACTGGTTTCCATGAGTACCCTT GCCGGTGTTTCCTCTCTTCACTGGTTTCCAGGAGTACCCTT < 41bp 1 0.719354653044397 1 0.0500763356685638 experiment 0.561290693911205 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYB5B ENSG00000103018 UTR3 Human protein_coding chr16:69496667 chr16:69496677 . . 0 31 hm5C_associated_SNPs_11790 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:69496622-69496678
64251 chr16 69496967 69496967 1 + C G rs377150053 69496973 + 69496953 69496993 41 CCTGGGCAACATAGCGAGACCCCTATCTGTATTAAAAAAAA CCTGGGCAACATAGGGAGACCCCTATCTGTATTAAAAAAAA < 41bp 1 0.249195689056386 1 0.175141125917435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYB5B ENSG00000103018 UTR3 Human protein_coding chr16:69496973 chr16:69496967 . . 0 15 hm5C_associated_SNPs_11791 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:69496950-69496985
64251 chr16 69497203 69497203 1 + G A rs12149862 69497187 + 69497167 69497207 41 CCAGCCCCTGAGCCCAGCCCCTTCCCAAGTGGTGCCGGACA CCAGCCCCTGAGCCCAGCCCCTTCCCAAGTGGTGCCAGACA < 41bp 1 0.188846950276963 1 0.136798053979874 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYB5B ENSG00000103018 UTR3 Human protein_coding chr16:69497187 chr16:69497203 . . 0 37 hm5C_associated_SNPs_11792 0 1 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:69497116-69497206
64251 chr16 69943390 69943390 1 + G A rs77414179 69943400 + 69943380 69943420 41 GCTGTCAGGCGTGTGCCACACACATCCCACCTCATCTTCTG GCTGTCAGGCATGTGCCACACACATCCCACCTCATCTTCTG < 41bp 1 0.205674485608268 1 0.153725922107697 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69943400 chr16:69943390 . . 0 11 hm5C_associated_SNPs_11793 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:69943375-69943403
64251 chr16 70148798 70148798 1 + A G rs552342289 70148795 + 70148775 70148815 41 CTAAAGACTGCTGCAGAGTCCGGAGGAAGAAGTCACCTAGA CTAAAGACTGCTGCAGAGTCCGGGGGAAGAAGTCACCTAGA < 41bp 1 0.688933811289013 1 0.933434844017029 experiment 0.622132377421975 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDPR ENSG00000090857 UTR5 Human protein_coding chr16:70148795 chr16:70148798 . . 0 24 hm5C_associated_SNPs_11796 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:70148763-70148827
64251 chr16 70194013 70194013 1 + C T rs142098932 70193993 + 70193973 70194013 41 GCCATCTGAACCTAGGAACACAAAGTATATTGGCCTCAAAC GCCATCTGAACCTAGGAACACAAAGTATATTGGCCTCAAAT < 41bp 1 0.55323528523404 1 0.267231523990631 experiment 0.893529429531919 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70193993 chr16:70194013 . . 0 41 hm5C_associated_SNPs_11798 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194013 70194013 1 + C T rs142098932 70194006 + 70193986 70194026 41 AGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGT AGGAACACAAAGTATATTGGCCTCAAATGGAGACCCAGGGT < 41bp 1 0.304701263006293 1 0.0549759268760681 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194006 chr16:70194013 . . 0 28 hm5C_associated_SNPs_11799 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194013 70194013 1 + C T rs142098932 70194007 + 70193987 70194027 41 GGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTT GGAACACAAAGTATATTGGCCTCAAATGGAGACCCAGGGTT < 41bp 1 0.519359086804559 1 0.370942175388336 experiment 0.961281826390882 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194007 chr16:70194013 . . 0 27 hm5C_associated_SNPs_11800 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194013 70194013 1 + C T rs142098932 70194009 + 70193989 70194029 41 AACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGC AACACAAAGTATATTGGCCTCAAATGGAGACCCAGGGTTGC < 41bp 1 0.375956139180786 1 0.496080696582794 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194009 chr16:70194013 . . 0 25 hm5C_associated_SNPs_11801 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194013 70194013 1 + C T rs142098932 70194019 + 70193999 70194039 41 ATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCCG ATATTGGCCTCAAATGGAGACCCAGGGTTGCCAGTTTTCCG < 41bp 1 0.222079963564225 1 0.0511307418346405 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194019 chr16:70194013 . . 0 15 hm5C_associated_SNPs_11802 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194013 70194013 1 + C T rs142098932 70194020 + 70194000 70194040 41 TATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCCGT TATTGGCCTCAAATGGAGACCCAGGGTTGCCAGTTTTCCGT < 41bp 1 0.469194925759515 1 0.180197536945343 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194020 chr16:70194013 . . 0 14 hm5C_associated_SNPs_11803 0 0 1 PCBP2 POSTAR2 ENCODE chr16:70194013-70194128
64251 chr16 70194885 70194885 1 + A G rs544809642 70194879 + 70194859 70194899 41 AATCTTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAGA AATCTTCTGTGGCCCACAGTCTCCATGTTGGCACTAGAAGA < 41bp 1 0.646439948897653 1 0.91494357585907 experiment 0.707120102204695 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70194879 chr16:70194885 . . 0 27 hm5C_associated_SNPs_11804 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:70194881-70194914
64251 chr16 70367545 70367545 1 + G A rs397821730 70367559 + 70367539 70367579 41 AAGTGCGTTCAGGGCACAGGCCCCGACATCACCCCAAGGAC AAGTGCATTCAGGGCACAGGCCCCGACATCACCCCAAGGAC < 41bp 1 0.619167661772314 1 0.38948455452919 experiment 0.761664676455373 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367559 chr16:70367545 . . 0 7 hm5C_associated_SNPs_11805 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:70367545-70367597
64251 chr16 70367548 70367548 1 + C G rs148606610 70367559 + 70367539 70367579 41 AAGTGCGTTCAGGGCACAGGCCCCGACATCACCCCAAGGAC AAGTGCGTTGAGGGCACAGGCCCCGACATCACCCCAAGGAC < 41bp 1 0.619747478065386 1 0.271716922521591 experiment 0.760505043869227 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LOC100506083 ENSG00000261777 ncRNA_intronic Human processed_transcript chr16:70367559 chr16:70367548 . . 0 10 hm5C_associated_SNPs_11806 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:70367545-70367597
64251 chr16 70380871 70380871 1 + A C rs536295255 70380882 + 70380862 70380902 41 ATTTTCACAAGTGGGTCTCCCTTGTCCGGGACTATGGCCAC ATTTTCACACGTGGGTCTCCCTTGTCCGGGACTATGGCCAC < 41bp 1 0.42421993932441 1 0.0183603167533875 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DDX19A ENSG00000168872 UTR5 Human protein_coding chr16:70380882 chr16:70380871 . . 0 10 hm5C_associated_SNPs_11807 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:70380856-70380880
64251 chr16 70407100 70407100 1 + C T rs80176395 70407108 + 70407088 70407128 41 ATGGCGCCACTGCACTCCAGCCTGGGTAACAGAGCGAGACC ATGGCGCCACTGTACTCCAGCCTGGGTAACAGAGCGAGACC < 41bp 1 0.417323797403481 1 0.143369078636169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX19A ENSG00000168872 UTR3 Human protein_coding chr16:70407108 chr16:70407100 . . 0 13 hm5C_associated_SNPs_11809 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:70407085-70407137
64251 chr16 70822624 70822624 1 + C T rs115714969 70822609 + 70822589 70822629 41 CAGCTGGAGCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG CAGCTGGAGCATTGGTGGTTCAGTGGTAGAATTCTTGCCTG < 41bp 1 0.73312992815583 1 0.754297614097595 experiment 0.53374014368834 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822609 chr16:70822624 . . 0 36 hm5C_associated_SNPs_11810 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822622 + 70822602 70822642 41 GGTGGTTCAGTGGTAGAATTCTCGCCTGCCATGCGGGCGGC GGTGGTTCAGTGGTAGAATTCTTGCCTGCCATGCGGGCGGC < 41bp 1 0.475849162854011 1 0.325884282588959 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822622 chr16:70822624 . . 0 23 hm5C_associated_SNPs_11811 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822626 + 70822606 70822646 41 GTTCAGTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCGGG GTTCAGTGGTAGAATTCTTGCCTGCCATGCGGGCGGCCGGG < 41bp 1 0.137329529098518 1 0.0979118645191193 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822626 chr16:70822624 . . 0 19 hm5C_associated_SNPs_11812 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822627 + 70822607 70822647 41 TTCAGTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCGGGC TTCAGTGGTAGAATTCTTGCCTGCCATGCGGGCGGCCGGGC < 41bp 1 0.359273059861173 1 0.152436792850494 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822627 chr16:70822624 . . 0 18 hm5C_associated_SNPs_11813 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822630 + 70822610 70822650 41 AGTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCGGGCTTC AGTGGTAGAATTCTTGCCTGCCATGCGGGCGGCCGGGCTTC < 41bp 1 0.192544729181551 1 0.0756628513336182 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822630 chr16:70822624 . . 0 15 hm5C_associated_SNPs_11814 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822631 + 70822611 70822651 41 GTGGTAGAATTCTCGCCTGCCATGCGGGCGGCCGGGCTTCG GTGGTAGAATTCTTGCCTGCCATGCGGGCGGCCGGGCTTCG < 41bp 1 0.236763416671575 1 0.389368146657944 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822631 chr16:70822624 . . 0 14 hm5C_associated_SNPs_11815 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822639 + 70822619 70822659 41 ATTCTCGCCTGCCATGCGGGCGGCCGGGCTTCGATTCCTGG ATTCTTGCCTGCCATGCGGGCGGCCGGGCTTCGATTCCTGG < 41bp 1 0.343130046291183 1 0.356131374835968 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822639 chr16:70822624 . . 0 6 hm5C_associated_SNPs_11816 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70822624 70822624 1 + C T rs115714969 70822643 + 70822623 70822663 41 TCGCCTGCCATGCGGGCGGCCGGGCTTCGATTCCTGGCCAA TTGCCTGCCATGCGGGCGGCCGGGCTTCGATTCCTGGCCAA < 41bp 1 0.68714250754052 1 0.832383632659912 experiment 0.62571498491896 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70822643 chr16:70822624 . . 0 2 hm5C_associated_SNPs_11817 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70822599-70822638
64251 chr16 70823471 70823471 1 + G A rs554463128 70823455 + 70823435 70823475 41 CTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCA CTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCAGCCA < 41bp 1 0.786616304406715 1 0.56662130355835 experiment 0.42676739118657 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823455 chr16:70823471 . . 0 37 hm5C_associated_SNPs_11822 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 70823471 70823471 1 + G A rs554463128 70823456 + 70823436 70823476 41 TCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAA TCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCAGCCAA < 41bp 1 0.773114521136837 1 0.593926668167114 experiment 0.453770957726326 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823456 chr16:70823471 . . 0 36 hm5C_associated_SNPs_11823 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 70823471 70823471 1 + G A rs554463128 70823457 + 70823437 70823477 41 CGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAAT CGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCAGCCAAT < 41bp 1 0.647018891496276 1 0.45972204208374 experiment 0.705962217007448 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823457 chr16:70823471 . . 0 35 hm5C_associated_SNPs_11824 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 70823471 70823471 1 + G A rs554463128 70823463 + 70823443 70823483 41 CCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCAGCA CCACGCGGGAGGCCCGGGTTCGATTCCCAGCCAATGCAGCA < 41bp 1 0.282041030456275 1 0.105802357196808 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823463 chr16:70823471 . . 0 29 hm5C_associated_SNPs_11825 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 70823476 70823476 1 + A G rs561388669 70823457 + 70823437 70823477 41 CGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAAT CGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAGT < 41bp 1 0.659716217409017 1 0.576538443565369 experiment 0.680567565181965 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823457 chr16:70823476 . . 0 40 hm5C_associated_SNPs_11826 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 70823476 70823476 1 + A G rs561388669 70823463 + 70823443 70823483 41 CCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCAGCA CCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAGTGCAGCA < 41bp 1 0.336552496417841 1 0.102567732334137 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VAC14 ENSG00000103043 intronic Human protein_coding chr16:70823463 chr16:70823476 . . 0 34 hm5C_associated_SNPs_11827 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:70823460-70823480
64251 chr16 71460399 71460399 1 + C T rs576296126 71460415 + 71460395 71460435 41 GGCCCTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATC GGCCTTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATC < 41bp 1 0.483186252071871 1 0.381159871816635 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460415 chr16:71460399 . . 0 5 hm5C_associated_SNPs_11828 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460380-71460420
64251 chr16 71460399 71460399 1 + C T rs576296126 71460418 + 71460398 71460438 41 CCTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGA CTTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGA < 41bp 1 0.521423032088605 1 0.255405455827713 experiment 0.95715393582279 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460418 chr16:71460399 . . 0 2 hm5C_associated_SNPs_11829 0 0 5 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460380-71460420
64251 chr16 71460401 71460401 1 + C G rs148516908 71460415 + 71460395 71460435 41 GGCCCTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATC GGCCCTGTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATC < 41bp 1 0.535649532422823 1 0.408318072557449 experiment 0.928700935154354 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460415 chr16:71460401 . . 0 7 hm5C_associated_SNPs_11830 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460380-71460420
64251 chr16 71460401 71460401 1 + C G rs148516908 71460418 + 71460398 71460438 41 CCTCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGA CCTGTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGA < 41bp 1 0.528079358321652 1 0.21859946846962 experiment 0.943841283356696 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460418 chr16:71460401 . . 0 4 hm5C_associated_SNPs_11831 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460380-71460420
64251 chr16 71460401 71460401 1 + C G rs148516908 71460420 + 71460400 71460440 41 TCTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGAAG TGTTAGCGCAGTGGGCAGCGCGTCAGTCTCATAATCTGAAG < 41bp 1 0.695588133864655 1 0.319864213466644 experiment 0.608823732270689 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460420 chr16:71460401 . . 0 2 hm5C_associated_SNPs_11832 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460380-71460420
64251 chr16 71460443 71460443 1 + C A rs552359940 71460429 + 71460409 71460449 41 AGTGGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGT AGTGGGCAGCGCGTCAGTCTCATAATCTGAAGGTACTGAGT < 41bp 1 0.521096702798635 1 0.568364024162292 experiment 0.957806594402729 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460429 chr16:71460443 . . 0 35 hm5C_associated_SNPs_11833 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460443 71460443 1 + C A rs552359940 71460444 + 71460424 71460464 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAG AGTCTCATAATCTGAAGGTACTGAGTTCGAGCCTCAGAGAG < 41bp 1 0.642477461697812 1 0.141049325466156 experiment 0.715045076604376 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460444 chr16:71460443 . . 0 20 hm5C_associated_SNPs_11834 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460443 71460443 1 + C A rs552359940 71460451 + 71460431 71460471 41 TAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCT TAATCTGAAGGTACTGAGTTCGAGCCTCAGAGAGGGCAGCT < 41bp 1 0.392747151058484 1 0.196513921022415 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460451 chr16:71460443 . . 0 13 hm5C_associated_SNPs_11835 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460443 71460443 1 + C A rs552359940 71460455 + 71460435 71460475 41 CTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTT CTGAAGGTACTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTT < 41bp 1 0.179899978235959 1 0.0823014080524445 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460455 chr16:71460443 . . 0 9 hm5C_associated_SNPs_11836 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460443 71460443 1 + C A rs552359940 71460458 + 71460438 71460478 41 AAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTTTGT AAGGTACTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTTTGT < 41bp 1 0.456598735878866 1 0.808641314506531 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460458 chr16:71460443 . . 0 6 hm5C_associated_SNPs_11837 0 0 39 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460429 + 71460409 71460449 41 AGTGGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGT AGTGGGCAGCGCGTCAGTCTCATAATCTGAAGGTCCTGAGA < 41bp 1 0.609010907939737 1 0.592382609844208 experiment 0.781978184120526 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460429 chr16:71460449 . . 0 41 hm5C_associated_SNPs_11838 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460443 + 71460423 71460463 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGAGATCGAGCCTCAGAGA < 41bp 1 0.306457270899622 1 0.0644101500511169 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460443 chr16:71460449 . . 0 27 hm5C_associated_SNPs_11839 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460444 + 71460424 71460464 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGAGATCGAGCCTCAGAGAG < 41bp 1 0.614032597218174 1 0.231049239635468 experiment 0.771934805563651 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460444 chr16:71460449 . . 0 26 hm5C_associated_SNPs_11840 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460451 + 71460431 71460471 41 TAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCT TAATCTGAAGGTCCTGAGATCGAGCCTCAGAGAGGGCAGCT < 41bp 1 0.466157198149241 1 0.254592955112457 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460451 chr16:71460449 . . 0 19 hm5C_associated_SNPs_11841 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460455 + 71460435 71460475 41 CTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTT CTGAAGGTCCTGAGATCGAGCCTCAGAGAGGGCAGCTGTTT < 41bp 1 0.187469287006785 1 0.121004343032837 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460455 chr16:71460449 . . 0 15 hm5C_associated_SNPs_11842 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460449 71460449 1 + T A rs532051640 71460458 + 71460438 71460478 41 AAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTTTGT AAGGTCCTGAGATCGAGCCTCAGAGAGGGCAGCTGTTTTGT < 41bp 1 0.446870522869444 1 0.849709391593933 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460458 chr16:71460449 . . 0 12 hm5C_associated_SNPs_11843 0 0 44 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460455 71460455 1 + C A rs375616702 71460443 + 71460423 71460463 41 CAGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGA CAGTCTCATAATCTGAAGGTCCTGAGTTCGAGACTCAGAGA < 41bp 1 0.327207009148165 1 0.0658527016639709 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460443 chr16:71460455 . . 0 33 hm5C_associated_SNPs_11844 0 0 43 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460455 71460455 1 + C A rs375616702 71460444 + 71460424 71460464 41 AGTCTCATAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAG AGTCTCATAATCTGAAGGTCCTGAGTTCGAGACTCAGAGAG < 41bp 1 0.638322999448608 1 0.31351637840271 experiment 0.723354001102785 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460444 chr16:71460455 . . 0 32 hm5C_associated_SNPs_11845 0 0 43 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460455 71460455 1 + C A rs375616702 71460451 + 71460431 71460471 41 TAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCT TAATCTGAAGGTCCTGAGTTCGAGACTCAGAGAGGGCAGCT < 41bp 1 0.79770158640909 1 0.206394881010056 experiment 0.40459682718182 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460451 chr16:71460455 . . 0 25 hm5C_associated_SNPs_11846 0 0 43 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460455 71460455 1 + C A rs375616702 71460458 + 71460438 71460478 41 AAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTTTGT AAGGTCCTGAGTTCGAGACTCAGAGAGGGCAGCTGTTTTGT < 41bp 1 0.531589465082956 1 0.894986271858215 experiment 0.936821069834089 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460458 chr16:71460455 . . 0 18 hm5C_associated_SNPs_11847 0 0 43 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:71460380-71460460
64251 chr16 71460467 71460467 1 + C T rs565821909 71460451 + 71460431 71460471 41 TAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCT TAATCTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGTAGCT < 41bp 1 0.403564009365808 1 0.177345722913742 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460451 chr16:71460467 . . 0 37 hm5C_associated_SNPs_11848 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460389-71460481
64251 chr16 71460467 71460467 1 + C T rs565821909 71460455 + 71460435 71460475 41 CTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTT CTGAAGGTCCTGAGTTCGAGCCTCAGAGAGGGTAGCTGTTT < 41bp 1 0.183632956880717 1 0.101344376802444 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460455 chr16:71460467 . . 0 33 hm5C_associated_SNPs_11849 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460389-71460481
64251 chr16 71460467 71460467 1 + C T rs565821909 71460458 + 71460438 71460478 41 AAGGTCCTGAGTTCGAGCCTCAGAGAGGGCAGCTGTTTTGT AAGGTCCTGAGTTCGAGCCTCAGAGAGGGTAGCTGTTTTGT < 41bp 1 0.390325632674939 1 0.778688192367554 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC02136 ENSG00000261348 upstream Human lincRNA chr16:71460458 chr16:71460467 . . 0 30 hm5C_associated_SNPs_11850 0 0 28 SSB POSTAR2 GSE95683,GSM2521599 chr16:71460389-71460481
64251 chr16 71956505 71956505 1 + G A rs72801788 71956504 + 71956484 71956524 41 AGTTGGTGGACCTGATGGAACGGTGCCAATGCCCATGCCCA AGTTGGTGGACCTGATGGAACAGTGCCAATGCCCATGCCCA < 41bp 1 0.633728613577474 1 0.247315764427185 experiment 0.732542772845052 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IST1 ENSG00000182149 CDS Human protein_coding chr16:71956504 chr16:71956505 synonymous SNV . 0 22 hm5C_associated_SNPs_11851 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:71956497-71956517
64251 chr16 72141614 72141614 1 + C T rs183625590 72141626 + 72141606 72141646 41 ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT ATGCTCATTGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT < 41bp 1 0.709119835610319 1 0.325788855552673 experiment 0.581760328779362 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141626 chr16:72141614 synonymous SNV . 0 9 hm5C_associated_SNPs_11852 0 0 1 FXR2 POSTAR2 ENCODE chr16:72141579-72141657
64251 chr16 72141640 72141640 1 + C A rs11554765 72141626 + 72141606 72141646 41 ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTACGAGAT < 41bp 1 0.642532989410761 1 0.210878521203995 experiment 0.714934021178478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141626 chr16:72141640 nonsynonymous SNV 0.979 2 35 hm5C_associated_SNPs_11853 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr16:72141622-72141648
64251 chr16 74339571 74339571 1 + G A rs531780153 74339565 + 74339545 74339585 41 AAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAA AAAAAGGATAGGAAAGAGGACAAGGAAAAAGATAAAGATAA < 41bp 1 0.551201467849256 1 0.405389219522476 experiment 0.897597064301488 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339565 chr16:74339571 synonymous SNV . 0 27 hm5C_associated_SNPs_11854 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:74339545-74339580
64251 chr16 75033679 75033679 1 + A T rs149929766 75033665 + 75033645 75033685 41 CCGCCGCCGGGAGGGGCGCCCCATTTCGGGCACTACCGGAC CCGCCGCCGGGAGGGGCGCCCCATTTCGGGCACTTCCGGAC < 41bp 1 0.208347655357468 1 0.0707085430622101 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNRF1 ENSG00000186187 CDS Human protein_coding chr16:75033665 chr16:75033679 nonsynonymous SNV 1.000 0 35 hm5C_associated_SNPs_11855 0 0 2 BCCIP POSTAR2 ENCODE chr16:75033668-75033757
64251 chr16 75033679 75033679 1 + A T rs149929766 75033677 + 75033657 75033697 41 GGGGCGCCCCATTTCGGGCACTACCGGACGGGCGGCGGGGC GGGGCGCCCCATTTCGGGCACTTCCGGACGGGCGGCGGGGC < 41bp 1 0.260607383412166 1 0.113227546215057 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZNRF1 ENSG00000186187 CDS Human protein_coding chr16:75033677 chr16:75033679 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_11856 0 0 2 BCCIP POSTAR2 ENCODE chr16:75033668-75033757
64251 chr16 75600365 75600365 1 + G A rs8192515 75600370 + 75600350 75600390 41 CCGCGAGCCGGTTCCGTCCCCTTCCCGCCGCCGCCATGAAG CCGCGAGCCGGTTCCATCCCCTTCCCGCCGCCGCCATGAAG < 41bp 1 0.471884420433644 1 0.114494800567627 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GABARAPL2 ENSG00000259992 ncRNA_intronic Human processed_transcript chr16:75600370 chr16:75600365 . . 0 16 hm5C_associated_SNPs_11872 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:75600317-75600369
64251 chr16 75600380 75600380 1 + C T rs201335061 75600370 + 75600350 75600390 41 CCGCGAGCCGGTTCCGTCCCCTTCCCGCCGCCGCCATGAAG CCGCGAGCCGGTTCCGTCCCCTTCCCGCCGTCGCCATGAAG < 41bp 1 0.457312810569117 1 0.0886068344116211 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GABARAPL2 ENSG00000259992 ncRNA_intronic Human processed_transcript chr16:75600370 chr16:75600380 . . 0 31 hm5C_associated_SNPs_11873 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:75600320-75600380
64251 chr16 77224889 77224889 1 + G A rs2232498 77224895 + 77224875 77224915 41 CAGATCCGTTGAAAGGAGTGCAGAGAGGTCTCATTGCGCTC CAGATCCGTTGAAAAGAGTGCAGAGAGGTCTCATTGCGCTC < 41bp 1 0.314156357550191 1 0.418245881795883 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 UTR5 Human protein_coding chr16:77224895 chr16:77224889 . . 0 15 hm5C_associated_SNPs_11874 0 0 1 NCBP2 POSTAR2 ENCODE chr16:77224867-77224998
64251 chr16 77775672 77775672 1 + A G rs16946429 77775688 + 77775668 77775708 41 CCTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC CCTGGAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC < 41bp 1 0.695058844107901 1 0.490426599979401 experiment 0.609882311784197 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775688 chr16:77775672 nonsynonymous SNV 0.100 3 5 hm5C_associated_SNPs_11875 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr16 77775672 77775672 1 + A G rs16946429 77775689 + 77775669 77775709 41 CTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA CTGGAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA < 41bp 1 0.528511950168146 1 0.733084857463837 experiment 0.942976099663707 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775689 chr16:77775672 nonsynonymous SNV 0.100 3 4 hm5C_associated_SNPs_11876 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr16 81077204 81077204 1 + T A rs16954513 81077198 + 81077178 81077218 41 GCTTGCTCTCTTAAGGAGAGCCTACCTCTTTTCAAAATTGC GCTTGCTCTCTTAAGGAGAGCCTACCACTTTTCAAAATTGC < 41bp 1 0.0133379810204117 1 0.032843679189682 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077198 chr16:81077204 synonymous SNV . 0 27 hm5C_associated_SNPs_11886 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:81077149-81077216
64251 chr16 81078081 81078081 1 + A G rs36040615 81078069 + 81078049 81078089 41 CTCAAACTGAAGAGAGTGAACTTAGCACCATGACCACCGAG CTCAAACTGAAGAGAGTGAACTTAGCACCATGGCCACCGAG < 41bp 1 0.380812328227647 1 0.179909020662308 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078069 chr16:81078081 nonsynonymous SNV 0.829 0 33 hm5C_associated_SNPs_11887 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:81078060-81078100
64251 chr16 81743787 81743787 1 + G A rs116642623 81743772 + 81743752 81743792 41 GGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCGGACGA GGGAAAAGTCAACTCCGATGCCACCATTGCGGGCCAGACGA < 41bp 1 0.0903722239424932 1 0.203680753707886 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMIP ENSG00000153815 UTR3 Human protein_coding chr16:81743772 chr16:81743787 . . 0 36 hm5C_associated_SNPs_11891 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:81743761-81743792
64251 chr16 83841560 83841560 1 + G C rs3743623 83841578 + 83841558 83841598 41 ATGCCCCGCGGTCCCGCGAGCTGCCAGTCTCGTCGCGAGAA ATCCCCCGCGGTCCCGCGAGCTGCCAGTCTCGTCGCGAGAA < 41bp 1 0.547233880812397 1 0.0779493451118469 experiment 0.905532238375205 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1 ENSG00000230989 UTR5 Human protein_coding chr16:83841578 chr16:83841560 . . 0 3 hm5C_associated_SNPs_11892 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:83841559-83841560
64251 chr16 83845980 83845980 1 + T G rs180677200 83845960 + 83845940 83845980 41 AAAACACTATTTTACTTAAACTGTTTCTTATCTAAATTCTT AAAACACTATTTTACTTAAACTGTTTCTTATCTAAATTCTG < 41bp 1 0.198374750726224 1 0.0442304015159607 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSBP1 ENSG00000230989 UTR3 Human protein_coding chr16:83845960 chr16:83845980 . . 0 41 hm5C_associated_SNPs_11893 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:83845907-83846051
64251 chr16 84036154 84036154 1 + T C rs114658873 84036153 + 84036133 84036173 41 AGTGTCTGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAA AGTGTCTGTGCTGCCAGGTCCCGGTGAAGCCCAAGGTTGAA < 41bp 1 0.536104654881927 1 0.636168479919434 experiment 0.927790690236146 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NECAB2 ENSG00000103154 UTR3 Human protein_coding chr16:84036153 chr16:84036154 . . 0 22 hm5C_associated_SNPs_11895 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:84036129-84036165
64251 chr16 84036155 84036155 1 + G A rs557940561 84036153 + 84036133 84036173 41 AGTGTCTGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAA AGTGTCTGTGCTGCCAGGTCCTAGTGAAGCCCAAGGTTGAA < 41bp 1 0.610169533665338 1 0.367743790149689 experiment 0.779660932669324 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NECAB2 ENSG00000103154 UTR3 Human protein_coding chr16:84036153 chr16:84036155 . . 0 23 hm5C_associated_SNPs_11896 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:84036129-84036165
64251 chr16 84036162 84036162 1 + C G rs78359178 84036153 + 84036133 84036173 41 AGTGTCTGTGCTGCCAGGTCCTGGTGAAGCCCAAGGTTGAA AGTGTCTGTGCTGCCAGGTCCTGGTGAAGGCCAAGGTTGAA < 41bp 1 0.721723209095152 1 0.572434723377228 experiment 0.556553581809696 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NECAB2 ENSG00000103154 UTR3 Human protein_coding chr16:84036153 chr16:84036162 . . 0 30 hm5C_associated_SNPs_11897 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:84036129-84036165
64251 chr16 84682169 84682169 1 + G A rs527778788 84682160 + 84682140 84682180 41 AGCCATGGCTGCGCAGCGGGCTGGCCGGGGGTCTCCTGAAC AGCCATGGCTGCGCAGCGGGCTGGCCGGGAGTCTCCTGAAC < 41bp 1 0.743380256665379 1 0.302707493305206 experiment 0.513239486669242 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL36 ENSG00000135686 UTR5 Human protein_coding chr16:84682160 chr16:84682169 . . 0 30 hm5C_associated_SNPs_11898 0 0 3 DDX3X POSTAR2 ENCODE chr16:84682130-84682216
64251 chr16 84682169 84682169 1 + G A rs527778788 84682164 + 84682144 84682184 41 ATGGCTGCGCAGCGGGCTGGCCGGGGGTCTCCTGAACCCGG ATGGCTGCGCAGCGGGCTGGCCGGGAGTCTCCTGAACCCGG < 41bp 1 0.783096785376949 1 0.798636436462402 experiment 0.433806429246101 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL36 ENSG00000135686 UTR5 Human protein_coding chr16:84682164 chr16:84682169 . . 0 26 hm5C_associated_SNPs_11899 0 0 3 DDX3X POSTAR2 ENCODE chr16:84682130-84682216
64251 chr16 84697888 84697888 1 + C T rs11555907 84697903 + 84697883 84697923 41 ACAAACGGGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTG ACAAATGGGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTG < 41bp 1 0.328126053734231 1 0.0392301380634308 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697903 chr16:84697888 . . 0 6 hm5C_associated_SNPs_11901 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:84697847-84697895
64251 chr16 84697912 84697912 1 + C T rs3803625 84697903 + 84697883 84697923 41 ACAAACGGGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTG ACAAACGGGCAGTTGTTTGGCCTGAATCTTGGGGCAAGTTG < 41bp 1 0.30276065975164 1 0.0786368846893311 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697903 chr16:84697912 . . 0 30 hm5C_associated_SNPs_11902 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:84697906-84697918
64251 chr16 84697912 84697912 1 + C T rs3803625 84697910 + 84697890 84697930 41 GGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTGGGGAGAG GGCAGTTGTTTGGCCTGAATCTTGGGGCAAGTTGGGGAGAG < 41bp 1 0.567096639807771 1 0.705483973026276 experiment 0.865806720384458 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697910 chr16:84697912 . . 0 23 hm5C_associated_SNPs_11903 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:84697906-84697918
64251 chr16 84697912 84697912 1 + C T rs3803625 84697917 + 84697897 84697937 41 GTTTGGCCTGAATCTCGGGGCAAGTTGGGGAGAGCACATAG GTTTGGCCTGAATCTTGGGGCAAGTTGGGGAGAGCACATAG < 41bp 1 0.516978212852642 1 0.0891420245170593 experiment 0.966043574294716 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697917 chr16:84697912 . . 0 16 hm5C_associated_SNPs_11904 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:84697906-84697918
64251 chr16 84697925 84697925 1 + G T rs77019536 84697910 + 84697890 84697930 41 GGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTGGGGAGAG GGCAGTTGTTTGGCCTGAATCTCGGGGCAAGTTGGTGAGAG < 41bp 1 0.773560668901433 1 0.846556544303894 experiment 0.452878662197133 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697910 chr16:84697925 . . 0 36 hm5C_associated_SNPs_11905 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84697906-84697933
64251 chr16 84697925 84697925 1 + G T rs77019536 84697917 + 84697897 84697937 41 GTTTGGCCTGAATCTCGGGGCAAGTTGGGGAGAGCACATAG GTTTGGCCTGAATCTCGGGGCAAGTTGGTGAGAGCACATAG < 41bp 1 0.446702405284302 1 0.0471181273460388 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84697917 chr16:84697925 . . 0 29 hm5C_associated_SNPs_11906 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84697906-84697933
64251 chr16 85689392 85689392 1 + C A rs138993136 85689403 + 85689383 85689423 41 CCCCACCCCCGGCTCCCTGCCCCCACTGCACCCATCAGCGA CCCCACCCCAGGCTCCCTGCCCCCACTGCACCCATCAGCGA < 41bp 1 0.475137875990398 1 0.306521832942963 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689403 chr16:85689392 synonymous SNV . 0 10 hm5C_associated_SNPs_11911 0 0 2 PCBP2 POSTAR2 ENCODE chr16:85689346-85689466
64251 chr16 85691168 85691168 1 + C T rs546732682 85691160 + 85691140 85691180 41 GAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA GAGCAGCACCTGGATATGGGCCGGCCCCTGGTGCCGGCGGA < 41bp 1 0.357067618917259 1 0.485369980335236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691160 chr16:85691168 nonsynonymous SNV 0.548 0 29 hm5C_associated_SNPs_11912 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691168 85691168 1 + C T rs546732682 85691161 + 85691141 85691181 41 AGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAG AGCAGCACCTGGATATGGGCCGGCCCCTGGTGCCGGCGGAG < 41bp 1 0.326027894053045 1 0.650067746639252 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691161 chr16:85691168 nonsynonymous SNV 0.548 0 28 hm5C_associated_SNPs_11913 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691168 85691168 1 + C T rs546732682 85691167 + 85691147 85691187 41 ACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAG ACCTGGATATGGGCCGGCCCCTGGTGCCGGCGGAGGCAGAG < 41bp 1 0.758493364621084 1 0.412212342023849 experiment 0.483013270757832 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691167 chr16:85691168 nonsynonymous SNV 0.548 0 22 hm5C_associated_SNPs_11914 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691168 85691168 1 + C T rs546732682 85691173 + 85691153 85691193 41 ATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGG ATATGGGCCGGCCCCTGGTGCCGGCGGAGGCAGAGCACAGG < 41bp 1 0.272582259570125 1 0.692564606666565 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691173 chr16:85691168 nonsynonymous SNV 0.548 0 16 hm5C_associated_SNPs_11915 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85707289 85707289 1 + C A rs76785102 85707307 + 85707287 85707327 41 CCCCTGCCTGCCCCCAGCATCTGGACAAGCTAATAGCAAAT CCACTGCCTGCCCCCAGCATCTGGACAAGCTAATAGCAAAT < 41bp 1 0.703217190347434 1 0.807343125343323 experiment 0.593565619305132 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85707307 chr16:85707289 . . 0 3 hm5C_associated_SNPs_11916 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:85707242-85707310
64251 chr16 85707326 85707326 1 + A G rs534276197 85707307 + 85707287 85707327 41 CCCCTGCCTGCCCCCAGCATCTGGACAAGCTAATAGCAAAT CCCCTGCCTGCCCCCAGCATCTGGACAAGCTAATAGCAAGT < 41bp 1 0.684729402823602 1 0.810167074203491 experiment 0.630541194352797 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85707307 chr16:85707326 . . 0 40 hm5C_associated_SNPs_11917 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:85707303-85707335
64251 chr16 85833295 85833295 1 + C G rs2233447 85833301 + 85833281 85833321 41 CTCCGCGGCGCGGCCTTGCTCTCTTCCGGTCGCGGGACACC CTCCGCGGCGCGGCGTTGCTCTCTTCCGGTCGCGGGACACC < 41bp 1 0.475556258555974 1 0.100087255239487 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COX4I1 ENSG00000131143 UTR5 Human protein_coding chr16:85833301 chr16:85833295 . . 0 15 hm5C_associated_SNPs_11918 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:85833268-85833352
64251 chr16 85833314 85833314 1 + G A rs2233446 85833301 + 85833281 85833321 41 CTCCGCGGCGCGGCCTTGCTCTCTTCCGGTCGCGGGACACC CTCCGCGGCGCGGCCTTGCTCTCTTCCGGTCGCAGGACACC < 41bp 1 0.467724598373413 1 0.169442117214203 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COX4I1 ENSG00000131143 UTR5 Human protein_coding chr16:85833301 chr16:85833314 . . 0 34 hm5C_associated_SNPs_11919 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:85833268-85833352
64251 chr16 85840474 85840474 1 + G A rs184745241 85840456 + 85840436 85840476 41 TTAGCCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAGAA TTAGCCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAAAA < 41bp 1 0.779164863827316 1 0.329088181257248 experiment 0.441670272345368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840456 chr16:85840474 synonymous SNV . 0 39 hm5C_associated_SNPs_11920 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:85840392-85840486
64251 chr16 87425942 87425942 1 + A G rs145549507 87425947 + 87425927 87425967 41 GAAGTGGCTATCGCCAGAGTCGGATTCGCCGCCGCAGCAGC GAAGTGGCTATCGCCGGAGTCGGATTCGCCGCCGCAGCAGC < 41bp 1 0.759495997457517 1 0.913296580314636 experiment 0.481008005084967 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP1LC3B ENSG00000140941 UTR5 Human protein_coding chr16:87425947 chr16:87425942 . . 0 16 hm5C_associated_SNPs_11922 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:87425940-87426000
64251 chr16 88600307 88600307 1 + G A rs189881009 88600316 + 88600296 88600336 41 CGCGAGGAGGGGGCTGGGGGCGCGGCCACGCCCGAGGACGG CGCGAGGAGGGAGCTGGGGGCGCGGCCACGCCCGAGGACGG < 41bp 1 0.786843643677716 1 0.735750377178192 experiment 0.426312712644569 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600316 chr16:88600307 synonymous SNV . 0 12 hm5C_associated_SNPs_11929 0 0 1 TNRC6A POSTAR2 ENCODE chr16:88600303-88600365
64251 chr16 88600307 88600307 1 + G A rs189881009 88600318 + 88600298 88600338 41 CGAGGAGGGGGCTGGGGGCGCGGCCACGCCCGAGGACGGCG CGAGGAGGGAGCTGGGGGCGCGGCCACGCCCGAGGACGGCG < 41bp 1 0.514927879771613 1 0.572977781295776 experiment 0.970144240456774 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600318 chr16:88600307 synonymous SNV . 0 10 hm5C_associated_SNPs_11930 0 0 1 TNRC6A POSTAR2 ENCODE chr16:88600303-88600365
64251 chr16 88600307 88600307 1 + G A rs189881009 88600321 + 88600301 88600341 41 GGAGGGGGCTGGGGGCGCGGCCACGCCCGAGGACGGCGCGG GGAGGGAGCTGGGGGCGCGGCCACGCCCGAGGACGGCGCGG < 41bp 1 0.573087960168946 1 0.577632546424866 experiment 0.853824079662107 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600321 chr16:88600307 synonymous SNV . 0 7 hm5C_associated_SNPs_11931 0 0 1 TNRC6A POSTAR2 ENCODE chr16:88600303-88600365
64251 chr16 88600307 88600307 1 + G A rs189881009 88600322 + 88600302 88600342 41 GAGGGGGCTGGGGGCGCGGCCACGCCCGAGGACGGCGCGGG GAGGGAGCTGGGGGCGCGGCCACGCCCGAGGACGGCGCGGG < 41bp 1 0.715357657763718 1 0.749507009983063 experiment 0.569284684472564 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600322 chr16:88600307 synonymous SNV . 0 6 hm5C_associated_SNPs_11932 0 0 1 TNRC6A POSTAR2 ENCODE chr16:88600303-88600365
64251 chr16 88600727 88600727 1 + C A rs551773012 88600742 + 88600722 88600762 41 TCGCCCGGCCCCGCGGCCGACGGCCCCATCGACCTGAGCAA TCGCCAGGCCCCGCGGCCGACGGCCCCATCGACCTGAGCAA < 41bp 1 0.514559700691701 1 0.576987743377686 experiment 0.970880598616597 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600742 chr16:88600727 synonymous SNV . 0 6 hm5C_associated_SNPs_11933 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:88600720-88600740
64251 chr16 88600729 88600729 1 + G A rs570344826 88600742 + 88600722 88600762 41 TCGCCCGGCCCCGCGGCCGACGGCCCCATCGACCTGAGCAA TCGCCCGACCCCGCGGCCGACGGCCCCATCGACCTGAGCAA < 41bp 1 0.44700765949168 1 0.59805166721344 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88600742 chr16:88600729 nonsynonymous SNV 0.002 0 8 hm5C_associated_SNPs_11934 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:88600720-88600740
64251 chr16 88779132 88779132 1 + C A rs2290895 88779122 + 88779102 88779142 41 GCGGCCGTGGACAGCTTCCTCCAGCAGCAGCATGTGCTGGG GCGGCCGTGGACAGCTTCCTCCAGCAGCAGAATGTGCTGGG < 41bp 1 0.500868713872103 1 0.917228579521179 experiment 0.998262572255795 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779122 chr16:88779132 nonsynonymous SNV 0.972 0 31 hm5C_associated_SNPs_11935 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:88779132-88779133
64251 chr16 88780603 88780603 1 + C G rs73262673 88780612 + 88780592 88780632 41 AGGCTGCAGACCCAGTTCCCCTCCACTGTCAGCACTGTGTA AGGCTGCAGACGCAGTTCCCCTCCACTGTCAGCACTGTGTA < 41bp 1 0.725999438450064 1 0.888290882110596 experiment 0.548001123099872 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780612 chr16:88780603 synonymous SNV . 0 12 hm5C_associated_SNPs_11938 0 0 1 PUM2 POSTAR2 ENCODE chr16:88780576-88780636
64251 chr16 88781004 88781004 1 + C T rs148822873 88781016 + 88780996 88781036 41 CAGTGCCACGGCTTTTGGGGCTCAGACCTCCTCGCGTCTCT CAGTGCCATGGCTTTTGGGGCTCAGACCTCCTCGCGTCTCT < 41bp 1 0.264628080918466 1 0.238263964653015 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781016 chr16:88781004 nonsynonymous SNV 0.829 3 9 hm5C_associated_SNPs_11939 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:88781000-88781020
64251 chr16 88781014 88781014 1 + G A rs141242265 88781016 + 88780996 88781036 41 CAGTGCCACGGCTTTTGGGGCTCAGACCTCCTCGCGTCTCT CAGTGCCACGGCTTTTGGAGCTCAGACCTCCTCGCGTCTCT < 41bp 1 0.322468957383747 1 0.269689202308655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781016 chr16:88781014 synonymous SNV . 0 19 hm5C_associated_SNPs_11940 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:88781000-88781020
64251 chr16 88781040 88781040 1 + A G rs8059048 88781052 + 88781032 88781072 41 TCTCTCCCAGATGCAGTCACCCATCCCCCTGACTGAGACCC TCTCTCCCGGATGCAGTCACCCATCCCCCTGACTGAGACCC < 41bp 1 0.0640851535168234 1 0.208890289068222 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781052 chr16:88781040 nonsynonymous SNV 0.063 1 9 hm5C_associated_SNPs_11941 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:88781018-88781052
64251 chr16 88781062 88781062 1 + G A rs28672793 88781052 + 88781032 88781072 41 TCTCTCCCAGATGCAGTCACCCATCCCCCTGACTGAGACCC TCTCTCCCAGATGCAGTCACCCATCCCCCTAACTGAGACCC < 41bp 1 0.0537545510280736 1 0.181927859783173 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781052 chr16:88781062 synonymous SNV . 0 31 hm5C_associated_SNPs_11942 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88781042-88781068
64251 chr16 88804730 88804730 1 - C G rs150688010 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCCGT < 41bp 1 0.623625910990833 1 0.344673454761505 experiment 0.752748178018334 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804730 synonymous SNV . 0 39 hm5C_associated_SNPs_11943 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr16 88804731 88804731 1 - G A rs539005229 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGTGGT < 41bp 1 0.55506363075206 1 0.253082156181335 experiment 0.88987273849588 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804731 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_11944 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr16 88804734 88804734 1 - A G rs7184427 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGCCGCGGT < 41bp 1 0.602279729229848 1 0.558372914791107 experiment 0.795440541540305 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804734 nonsynonymous SNV 0.001 0 35 hm5C_associated_SNPs_11945 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr16 88804735 88804735 1 - C A rs115486714 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCTTCGCGGT < 41bp 1 0.590336691490505 1 0.348843216896057 experiment 0.81932661701899 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804735 nonsynonymous SNV 0.002 1 34 hm5C_associated_SNPs_11946 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr16 88804765 88804765 1 - T C rs114403731 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCGTCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT < 41bp 1 0.605777724254906 1 0.328189313411713 experiment 0.788444551490189 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804765 nonsynonymous SNV 0.879 0 4 hm5C_associated_SNPs_11947 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr16 88874545 88874545 1 + G A rs3218720 88874551 + 88874531 88874571 41 GAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGCCGGACTG GAGAAGCACCTGCTACTCCTCTCCGAGCTGCTGCCGGACTG < 41bp 1 0.797274459078198 1 0.79390013217926 experiment 0.405451081843605 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874551 chr16:88874545 synonymous SNV . 0 15 hm5C_associated_SNPs_11948 0 0 5 DDX6 POSTAR2 ENCODE chr16:88874524-88874583
64251 chr16 88874566 88874566 1 + G A rs139633564 88874551 + 88874531 88874571 41 GAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGCCGGACTG GAGAAGCACCTGCTGCTCCTCTCCGAGCTGCTGCCAGACTG < 41bp 1 0.771369218462754 1 0.821058750152588 experiment 0.457261563074493 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874551 chr16:88874566 synonymous SNV . 0 36 hm5C_associated_SNPs_11949 1 0 12 ALKBH5 POSTAR2 GSE38201,GSM936506 chr16:88874548-88874576
64251 chr16 88875050 88875050 1 + C T rs115858231 88875066 + 88875046 88875086 41 CATCCCCTCTAATCTTGGAACCTCTGAATATGGGACCTCCC CATCTCCTCTAATCTTGGAACCTCTGAATATGGGACCTCCC < 41bp 1 0.050612270278189 1 0.0690692961215973 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDT1 ENSG00000167513 UTR3 Human protein_coding chr16:88875066 chr16:88875050 . . 0 5 hm5C_associated_SNPs_11950 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88875015-88875065
64251 chr16 89603217 89603217 1 + C T rs144415749 89603199 + 89603179 89603219 41 CTCTTGACCAGCTACCCTCCCAGGGGACCATGAGGAAGCTC CTCTTGACCAGCTACCCTCCCAGGGGACCATGAGGAAGTTC < 41bp 1 0.696811761741601 1 0.501458942890167 experiment 0.606376476516798 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89603199 chr16:89603217 nonsynonymous SNV 0.004 1 39 hm5C_associated_SNPs_11953 1 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:89603199-89603228
64251 chr16 89603536 89603536 1 + G A rs182441221 89603526 + 89603506 89603546 41 GAGCCACAGCTGTGCATGCTCAGCCCTGCCGAGGTCCCAGG GAGCCACAGCTGTGCATGCTCAGCCCTGCCAAGGTCCCAGG < 41bp 1 0.399567485489078 1 0.244093060493469 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPG7 ENSG00000197912 UTR3 Human protein_coding chr16:89603526 chr16:89603536 . . 0 31 hm5C_associated_SNPs_11954 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89603519-89603557
64251 chr16 89620302 89620302 1 + G A rs79756036 89620301 + 89620281 89620321 41 GCCCATCTCCTTCCCTGAGGCGCAGGAGGGCCTCATGGGCA GCCCATCTCCTTCCCTGAGGCACAGGAGGGCCTCATGGGCA < 41bp 1 0.612781914140148 1 0.401648491621017 experiment 0.774436171719703 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89620301 chr16:89620302 synonymous SNV . 0 22 hm5C_associated_SNPs_11955 3 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:89620301-89620302
64251 chr16 89627076 89627076 1 + T C rs375575770 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATCGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG < 41bp 1 0.365780238246345 1 0.240009754896164 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627076 . . 0 3 hm5C_associated_SNPs_11956 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:89627060-89627080
64251 chr16 89627079 89627079 1 + G A rs558653840 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATTGCAGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG < 41bp 1 0.408527330403607 1 0.361914455890656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627079 . . 0 6 hm5C_associated_SNPs_11957 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:89627060-89627080
64251 chr16 89627079 89627079 1 + G A rs558653840 89627099 + 89627079 89627119 41 GGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA AGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA < 41bp 1 0.486250170866695 1 0.426066130399704 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627099 chr16:89627079 . . 0 1 hm5C_associated_SNPs_11958 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:89627060-89627080
64251 chr16 89627081 89627081 1 + G A rs576742925 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATTGCGGAGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG < 41bp 1 0.379773794819178 1 0.226849555969238 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627081 . . 0 8 hm5C_associated_SNPs_11959 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627081 89627081 1 + G A rs576742925 89627099 + 89627079 89627119 41 GGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA GGAGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA < 41bp 1 0.501189950648343 1 0.424533188343048 experiment 0.997620098703315 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627099 chr16:89627081 . . 0 3 hm5C_associated_SNPs_11960 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627082 89627082 1 + G A rs370164340 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATTGCGGGACCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG < 41bp 1 0.354899252860168 1 0.336786717176437 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627082 . . 0 9 hm5C_associated_SNPs_11961 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627082 89627082 1 + G A rs370164340 89627099 + 89627079 89627119 41 GGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA GGGACCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA < 41bp 1 0.497138077558192 1 0.455664038658142 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627099 chr16:89627082 . . 0 4 hm5C_associated_SNPs_11962 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627082 89627082 1 + G A rs370164340 89627102 + 89627082 89627122 41 GCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGGT ACCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGGT < 41bp 1 0.104397893176609 1 0.121343821287155 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627102 chr16:89627082 . . 0 1 hm5C_associated_SNPs_11963 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627084 89627084 1 + C T rs144161178 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATTGCGGGGCTGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG < 41bp 1 0.402282600103786 1 0.399606645107269 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627084 . . 0 11 hm5C_associated_SNPs_11964 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627084 89627084 1 + C T rs144161178 89627099 + 89627079 89627119 41 GGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA GGGGCTGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA < 41bp 1 0.506375728960547 1 0.501935422420502 experiment 0.987248542078907 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627099 chr16:89627084 . . 0 6 hm5C_associated_SNPs_11965 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627084 89627084 1 + C T rs144161178 89627102 + 89627082 89627122 41 GCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGGT GCTGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGGT < 41bp 1 0.137722461640353 1 0.133188813924789 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627102 chr16:89627084 . . 0 3 hm5C_associated_SNPs_11966 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627097 89627097 1 + C T rs542001153 89627094 + 89627074 89627114 41 ATTGCGGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCG ATTGCGGGGCCGCTTCCTTTCCGTTCGGCTGTTTTCCTGCG < 41bp 1 0.242764793340739 1 0.0768342912197113 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627094 chr16:89627097 . . 0 24 hm5C_associated_SNPs_11967 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627097 89627097 1 + C T rs542001153 89627099 + 89627079 89627119 41 GGGGCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGA GGGGCCGCTTCCTTTCCGTTCGGCTGTTTTCCTGCGCAGGA < 41bp 1 0.500088321463432 1 0.441199600696564 experiment 0.999823357073137 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627099 chr16:89627097 . . 0 19 hm5C_associated_SNPs_11968 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627097 89627097 1 + C T rs542001153 89627102 + 89627082 89627122 41 GCCGCTTCCTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGGT GCCGCTTCCTTTCCGTTCGGCTGTTTTCCTGCGCAGGAGGT < 41bp 1 0.122890800792956 1 0.121613651514053 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627102 chr16:89627097 . . 0 16 hm5C_associated_SNPs_11969 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr16 89627127 89627127 1 + G A rs114240257 89627115 + 89627095 89627135 41 CGCTCGGCTGTTTTCCTGCGCAGGAGGTGAGGGAGACTGGG CGCTCGGCTGTTTTCCTGCGCAGGAGGTGAGGAAGACTGGG < 41bp 1 0.777313664199569 1 0.864108681678772 experiment 0.445372671600861 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627115 chr16:89627127 . . 0 33 hm5C_associated_SNPs_11970 0 0 14 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:89627112-89627133
64251 chr16 89627460 89627460 1 + T G rs2280370 89627445 + 89627425 89627465 41 CGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGAT CGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGGAAGAT < 41bp 1 0.349510583177601 1 0.0785979330539703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627445 chr16:89627460 synonymous SNV . 0 36 hm5C_associated_SNPs_11971 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr16 89627460 89627460 1 + T G rs2280370 89627456 + 89627436 89627476 41 CACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGGTGAG CACGTGGTTCAACCAGCCGGCCCGGAAGATCCGCAGGTGAG < 41bp 1 0.348739288579684 1 0.188221603631973 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627456 chr16:89627460 synonymous SNV . 0 25 hm5C_associated_SNPs_11972 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr16 89627671 89627671 1 + C G rs174035 89627672 + 89627652 89627692 41 CCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCC CCAAGGCGCGCCGCATCGCGCCGCGCCCCGCGTCGGGTCCC < 41bp 1 0.636704884003184 1 0.410935938358307 experiment 0.726590231993631 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627672 chr16:89627671 synonymous SNV . 0 20 hm5C_associated_SNPs_11973 0 0 27 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627671 89627671 1 + C G rs174035 89627679 + 89627659 89627699 41 GCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCCATCCGGC GCGCCGCATCGCGCCGCGCCCCGCGTCGGGTCCCATCCGGC < 41bp 1 0.660243051344678 1 0.270209729671478 experiment 0.679513897310644 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627679 chr16:89627671 synonymous SNV . 0 13 hm5C_associated_SNPs_11974 0 0 27 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627671 89627671 1 + C G rs174035 89627691 + 89627671 89627711 41 CCCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCT GCCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCT < 41bp 1 0.092350387161344 1 0.0990476608276367 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627691 chr16:89627671 synonymous SNV . 0 1 hm5C_associated_SNPs_11975 0 0 27 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627672 + 89627652 89627692 41 CCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCC CCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGTCGGGGCCC < 41bp 1 0.68555696688485 1 0.323637783527374 experiment 0.6288860662303 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627672 chr16:89627689 synonymous SNV . 0 38 hm5C_associated_SNPs_11976 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627679 + 89627659 89627699 41 GCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCCATCCGGC GCGCCGCATCGCCCCGCGCCCCGCGTCGGGGCCCATCCGGC < 41bp 1 0.654700318435396 1 0.306451112031937 experiment 0.690599363129207 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627679 chr16:89627689 synonymous SNV . 0 31 hm5C_associated_SNPs_11977 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627691 + 89627671 89627711 41 CCCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCT CCCGCGCCCCGCGTCGGGGCCCATCCGGCCCATCGTGCGCT < 41bp 1 0.0652525017561101 1 0.0685529708862305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627691 chr16:89627689 synonymous SNV . 0 19 hm5C_associated_SNPs_11978 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627692 + 89627672 89627712 41 CCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCTG CCGCGCCCCGCGTCGGGGCCCATCCGGCCCATCGTGCGCTG < 41bp 1 0.432832975362844 1 0.0840460360050201 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627692 chr16:89627689 synonymous SNV . 0 18 hm5C_associated_SNPs_11979 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627695 + 89627675 89627715 41 CGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCTGCCC CGCCCCGCGTCGGGGCCCATCCGGCCCATCGTGCGCTGCCC < 41bp 1 0.628323078678451 1 0.884824752807617 experiment 0.743353842643098 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627695 chr16:89627689 synonymous SNV . 0 15 hm5C_associated_SNPs_11980 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627689 89627689 1 + T G rs564290531 89627699 + 89627679 89627719 41 CCGCGTCGGGTCCCATCCGGCCCATCGTGCGCTGCCCCACG CCGCGTCGGGGCCCATCCGGCCCATCGTGCGCTGCCCCACG < 41bp 1 0.304416094435122 1 0.0427840352058411 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627699 chr16:89627689 synonymous SNV . 0 11 hm5C_associated_SNPs_11981 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr16:89627632-89627698
64251 chr16 89627863 89627863 1 + C T rs575878848 89627848 + 89627828 89627868 41 TGGCCTCAGTCGCGTGATGACATTCTCCGGAATCGCTGTAC TGGCCTCAGTCGCGTGATGACATTCTCCGGAATCGTTGTAC < 41bp 1 0.0668107700752396 1 0.0626578330993652 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627848 chr16:89627863 . . 0 36 hm5C_associated_SNPs_11982 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627852 + 89627832 89627872 41 CTCAGTCGCGTGATGACATTCTCCGGAATCGCTGTACGGCC CTCAGTCGCGTGATGACATTCTCCGGAATCGTTGTACGGCC < 41bp 1 0.575613459800863 1 0.882109761238098 experiment 0.848773080398274 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627852 chr16:89627863 . . 0 32 hm5C_associated_SNPs_11983 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627854 + 89627834 89627874 41 CAGTCGCGTGATGACATTCTCCGGAATCGCTGTACGGCCTT CAGTCGCGTGATGACATTCTCCGGAATCGTTGTACGGCCTT < 41bp 1 0.656365889139631 1 0.90520304441452 experiment 0.687268221720739 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627854 chr16:89627863 . . 0 30 hm5C_associated_SNPs_11984 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627855 + 89627835 89627875 41 AGTCGCGTGATGACATTCTCCGGAATCGCTGTACGGCCTTG AGTCGCGTGATGACATTCTCCGGAATCGTTGTACGGCCTTG < 41bp 1 0.675556097949596 1 0.833850085735321 experiment 0.648887804100809 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627855 chr16:89627863 . . 0 29 hm5C_associated_SNPs_11985 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627861 + 89627841 89627881 41 GTGATGACATTCTCCGGAATCGCTGTACGGCCTTGATGAAA GTGATGACATTCTCCGGAATCGTTGTACGGCCTTGATGAAA < 41bp 1 0.182197597538502 1 0.390704482793808 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627861 chr16:89627863 . . 0 23 hm5C_associated_SNPs_11986 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627868 + 89627848 89627888 41 CATTCTCCGGAATCGCTGTACGGCCTTGATGAAAGCACATT CATTCTCCGGAATCGTTGTACGGCCTTGATGAAAGCACATT < 41bp 1 0.195678273162895 1 0.162464410066605 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627868 chr16:89627863 . . 0 16 hm5C_associated_SNPs_11987 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627871 + 89627851 89627891 41 TCTCCGGAATCGCTGTACGGCCTTGATGAAAGCACATTTGA TCTCCGGAATCGTTGTACGGCCTTGATGAAAGCACATTTGA < 41bp 1 0.0421518732039598 1 0.031143993139267 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627871 chr16:89627863 . . 0 13 hm5C_associated_SNPs_11988 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627872 + 89627852 89627892 41 CTCCGGAATCGCTGTACGGCCTTGATGAAAGCACATTTGAA CTCCGGAATCGTTGTACGGCCTTGATGAAAGCACATTTGAA < 41bp 1 0.25697608277544 1 0.166038542985916 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627872 chr16:89627863 . . 0 12 hm5C_associated_SNPs_11989 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627863 89627863 1 + C T rs575878848 89627883 + 89627863 89627903 41 CTGTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCAT TTGTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCAT < 41bp 1 0.294599035037289 1 0.052655965089798 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627883 chr16:89627863 . . 0 1 hm5C_associated_SNPs_11990 0 0 72 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:89627820-89627900
64251 chr16 89627902 89627902 1 + A T rs375564801 89627883 + 89627863 89627903 41 CTGTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCAT CTGTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCTT < 41bp 1 0.286975447025326 1 0.0751442909240723 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627883 chr16:89627902 . . 0 40 hm5C_associated_SNPs_11991 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627885 + 89627865 89627905 41 GTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCATCT GTACGGCCTTGATGAAAGCACATTTGAACCCTTTTCCTTCT < 41bp 1 0.0860990423433169 1 0.0256139934062958 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627885 chr16:89627902 . . 0 38 hm5C_associated_SNPs_11992 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627893 + 89627873 89627913 41 TTGATGAAAGCACATTTGAACCCTTTTCCATCTGATTGCTG TTGATGAAAGCACATTTGAACCCTTTTCCTTCTGATTGCTG < 41bp 1 0.0360342677391505 1 0.0318958461284637 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627893 chr16:89627902 . . 0 30 hm5C_associated_SNPs_11993 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627894 + 89627874 89627914 41 TGATGAAAGCACATTTGAACCCTTTTCCATCTGATTGCTGA TGATGAAAGCACATTTGAACCCTTTTCCTTCTGATTGCTGA < 41bp 1 0.01776269112932 1 0.0264248847961426 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627894 chr16:89627902 . . 0 29 hm5C_associated_SNPs_11994 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627895 + 89627875 89627915 41 GATGAAAGCACATTTGAACCCTTTTCCATCTGATTGCTGAG GATGAAAGCACATTTGAACCCTTTTCCTTCTGATTGCTGAG < 41bp 1 0.0403520209584571 1 0.0476866066455841 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627895 chr16:89627902 . . 0 28 hm5C_associated_SNPs_11995 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627900 + 89627880 89627920 41 AAGCACATTTGAACCCTTTTCCATCTGATTGCTGAGGCTTT AAGCACATTTGAACCCTTTTCCTTCTGATTGCTGAGGCTTT < 41bp 1 0.0125446470487325 1 0.109165906906128 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627900 chr16:89627902 . . 0 23 hm5C_associated_SNPs_11996 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627901 + 89627881 89627921 41 AGCACATTTGAACCCTTTTCCATCTGATTGCTGAGGCTTTT AGCACATTTGAACCCTTTTCCTTCTGATTGCTGAGGCTTTT < 41bp 1 0.0947709738667654 1 0.232279121875763 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627901 chr16:89627902 . . 0 22 hm5C_associated_SNPs_11997 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89627902 89627902 1 + A T rs375564801 89627904 + 89627884 89627924 41 ACATTTGAACCCTTTTCCATCTGATTGCTGAGGCTTTTCAT ACATTTGAACCCTTTTCCTTCTGATTGCTGAGGCTTTTCAT < 41bp 1 0.20376529613683 1 0.0295722186565399 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD68 ENSG00000200084 ncRNA_exonic Human snoRNA chr16:89627904 chr16:89627902 . . 0 19 hm5C_associated_SNPs_11998 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89627882-89627909
64251 chr16 89629736 89629736 1 + C G rs3211567 89629746 + 89629726 89629766 41 TTTAAAGAGGCAAGGTTGGGCTGGTGCTCACAGCTGTAATC TTTAAAGAGGGAAGGTTGGGCTGGTGCTCACAGCTGTAATC < 41bp 1 0.470093760554081 1 0.265472382307053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629746 chr16:89629736 . . 0 11 hm5C_associated_SNPs_11999 0 0 59 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89629585-89629758
64251 chr16 89629743 89629743 1 + G A rs528376805 89629746 + 89629726 89629766 41 TTTAAAGAGGCAAGGTTGGGCTGGTGCTCACAGCTGTAATC TTTAAAGAGGCAAGGTTAGGCTGGTGCTCACAGCTGTAATC < 41bp 1 0.54208427315111 1 0.266640603542328 experiment 0.915831453697779 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629746 chr16:89629743 . . 0 18 hm5C_associated_SNPs_12000 0 0 32 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89629585-89629758
64251 chr16 89629744 89629744 1 + G A rs546920024 89629746 + 89629726 89629766 41 TTTAAAGAGGCAAGGTTGGGCTGGTGCTCACAGCTGTAATC TTTAAAGAGGCAAGGTTGAGCTGGTGCTCACAGCTGTAATC < 41bp 1 0.516218974886109 1 0.444865018129349 experiment 0.967562050227783 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629746 chr16:89629744 . . 0 19 hm5C_associated_SNPs_12001 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89629585-89629758
64251 chr16 89629747 89629747 1 + T A rs571344480 89629746 + 89629726 89629766 41 TTTAAAGAGGCAAGGTTGGGCTGGTGCTCACAGCTGTAATC TTTAAAGAGGCAAGGTTGGGCAGGTGCTCACAGCTGTAATC < 41bp 1 0.523116837051738 1 0.752203166484833 experiment 0.953766325896524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89629746 chr16:89629747 . . 0 22 hm5C_associated_SNPs_12002 0 0 29 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89629585-89629758
64251 chr16 89630613 89630613 1 + C T rs546979554 89630597 + 89630577 89630617 41 CTACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCCAGGG CTACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCTAGGG < 41bp 1 0.3723128888635 1 0.285634934902191 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630597 chr16:89630613 . . 0 37 hm5C_associated_SNPs_12003 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr16:89630596-89630615
64251 chr16 89630613 89630613 1 + C T rs546979554 89630598 + 89630578 89630618 41 TACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCCAGGGA TACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCTAGGGA < 41bp 1 0.38068078044064 1 0.701440095901489 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630598 chr16:89630613 . . 0 36 hm5C_associated_SNPs_12004 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr16:89630596-89630615
64251 chr16 89630613 89630613 1 + C T rs546979554 89630609 + 89630589 89630629 41 GCCGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGG GCCGGGTGCCGGTATTGAGGCACCTAGGGAGCTGTTACTGG < 41bp 1 0.31211861063303 1 0.105868369340897 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630609 chr16:89630613 . . 0 25 hm5C_associated_SNPs_12005 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr16:89630596-89630615
64251 chr16 89630613 89630613 1 + C T rs546979554 89630611 + 89630591 89630631 41 CGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCG CGGGTGCCGGTATTGAGGCACCTAGGGAGCTGTTACTGGCG < 41bp 1 0.101744233373059 1 0.124186277389526 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630611 chr16:89630613 . . 0 23 hm5C_associated_SNPs_12006 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr16:89630596-89630615
64251 chr16 89630621 89630621 1 + T G rs114683888 89630609 + 89630589 89630629 41 GCCGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGG GCCGGGTGCCGGTATTGAGGCACCCAGGGAGCGGTTACTGG < 41bp 1 0.222797476702117 1 0.0811923146247864 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630609 chr16:89630621 . . 0 33 hm5C_associated_SNPs_12007 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:89630596-89630626
64251 chr16 89630621 89630621 1 + T G rs114683888 89630611 + 89630591 89630631 41 CGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCG CGGGTGCCGGTATTGAGGCACCCAGGGAGCGGTTACTGGCG < 41bp 1 0.256515201604717 1 0.117305278778076 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630611 chr16:89630621 . . 0 31 hm5C_associated_SNPs_12008 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:89630596-89630626
64251 chr16 89630621 89630621 1 + T G rs114683888 89630612 + 89630592 89630632 41 GGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCGT GGGTGCCGGTATTGAGGCACCCAGGGAGCGGTTACTGGCGT < 41bp 1 0.679996918459533 1 0.710926532745361 experiment 0.640006163080934 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630612 chr16:89630621 . . 0 30 hm5C_associated_SNPs_12009 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:89630596-89630626
64251 chr16 89630630 89630630 1 + C T rs12932337 89630611 + 89630591 89630631 41 CGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCG CGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGTG < 41bp 1 0.217773709057802 1 0.123187214136124 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630611 chr16:89630630 . . 0 40 hm5C_associated_SNPs_12010 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr16:89630596-89630644
64251 chr16 89630630 89630630 1 + C T rs12932337 89630612 + 89630592 89630632 41 GGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCGT GGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGTGT < 41bp 1 0.626316095624783 1 0.758558034896851 experiment 0.747367808750433 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL13 ENSG00000167526 UTR3 Human protein_coding chr16:89630612 chr16:89630630 . . 0 39 hm5C_associated_SNPs_12011 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr16:89630596-89630644
64251 chr16 89651199 89651199 1 + C A rs114838488 89651185 + 89651165 89651205 41 CTTGTGCCTCTCCCCAGGACCTCTTCAGCAAGTCCGACCCC CTTGTGCCTCTCCCCAGGACCTCTTCAGCAAGTCAGACCCC < 41bp 1 0.132064898207921 1 0.105902343988419 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89651185 chr16:89651199 synonymous SNV . 0 35 hm5C_associated_SNPs_12013 0 0 3 BUD13 POSTAR2 ENCODE chr16:89651187-89651213
64251 chr16 89663190 89663190 1 + C T rs3751681 89663188 + 89663168 89663208 41 TGGGATCCTGCTGGCTTGGGCCCGGCTCTGGGGCCCCCAAG TGGGATCCTGCTGGCTTGGGCCTGGCTCTGGGGCCCCCAAG < 41bp 1 0.312467903067146 1 0.283032566308975 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CPNE7 ENSG00000178773 UTR3 Human protein_coding chr16:89663188 chr16:89663190 . . 0 23 hm5C_associated_SNPs_12014 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:89663162-89663200
64251 chr16 89727606 89727606 1 + G A rs188486606 89727624 + 89727604 89727644 41 CTGTTAGGATATTGATGTGGCTTGGCTGTGTCCTCACCCAA CTATTAGGATATTGATGTGGCTTGGCTGTGTCCTCACCCAA < 41bp 1 0.348106478680774 1 0.0798616409301758 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA33 ENSG00000167523 UTR3 Human protein_coding chr16:89727624 chr16:89727606 . . 0 3 hm5C_associated_SNPs_12015 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:89727592-89727629
64251 chr16 89759822 89759822 1 + C G rs554811580 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTTCGGCCTGGCGCGGGCCTATGGTGTCCCAGTA < 41bp 1 0.611623868512049 1 0.896915435791016 experiment 0.776752262975903 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759822 synonymous SNV . 0 20 hm5C_associated_SNPs_12016 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr16 89786945 89786945 1 + C A rs565463571 89786937 + 89786917 89786957 41 GAGCCCAGGCTGTGATGCACCGGCTCAGCGAGCGGAGTGGA GAGCCCAGGCTGTGATGCACCGGCTCAGAGAGCGGAGTGGA < 41bp 1 0.449063702647892 1 0.0655342042446136 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VPS9D1 ENSG00000158805 UTR5 Human protein_coding chr16:89786937 chr16:89786945 . . 0 29 hm5C_associated_SNPs_12018 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:89786933-89786956
64251 chr16 89925689 89925689 1 + C G rs532096505 89925700 + 89925680 89925720 41 CACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAG CACCCACCCGCCAGGAGGGACGGAGCCACCACGGCCCCGAG < 41bp 1 0.517983265693339 1 0.742708027362823 experiment 0.964033468613322 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925700 chr16:89925689 synonymous SNV . 0 10 hm5C_associated_SNPs_12019 0 0 4 GRWD1 POSTAR2 ENCODE chr16:89925601-89925705
64251 chr16 89925691 89925691 1 + C A rs148431869 89925700 + 89925680 89925720 41 CACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAG CACCCACCCCCAAGGAGGGACGGAGCCACCACGGCCCCGAG < 41bp 1 0.459845327690166 1 0.786609947681427 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925700 chr16:89925691 nonsynonymous SNV 0.035 0 12 hm5C_associated_SNPs_12020 0 0 4 GRWD1 POSTAR2 ENCODE chr16:89925601-89925705
64251 chr16 89970563 89970563 1 + C G rs191814837 89970558 + 89970538 89970578 41 TGCTCGAGTCTTGCAGTGTGCGGCCCGACGCCAGCGTTTCC TGCTCGAGTCTTGCAGTGTGCGGCCGGACGCCAGCGTTTCC < 41bp 1 0.579986121382223 1 0.465707421302795 experiment 0.840027757235554 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89970558 chr16:89970563 synonymous SNV . 0 26 hm5C_associated_SNPs_12021 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89970545-89970572
64251 chr16 89970566 89970566 1 + C G rs73276578 89970558 + 89970538 89970578 41 TGCTCGAGTCTTGCAGTGTGCGGCCCGACGCCAGCGTTTCC TGCTCGAGTCTTGCAGTGTGCGGCCCGAGGCCAGCGTTTCC < 41bp 1 0.481958046524689 1 0.345805585384369 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89970558 chr16:89970566 nonsynonymous SNV 0.002 3 29 hm5C_associated_SNPs_12022 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89970545-89970572
64251 chr16 89985117 89985117 1 + G A rs372719558 89985128 + 89985108 89985148 41 TTTTTTAACGTAAAGGAGATCCGCGGTGTGAGGGACCCCCT TTTTTTAACATAAAGGAGATCCGCGGTGTGAGGGACCCCCT < 41bp 1 0.592744351502888 1 0.189578026533127 experiment 0.814511296994224 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MC1R ENSG00000258839 UTR5 Human protein_coding chr16:89985128 chr16:89985117 . . 0 10 hm5C_associated_SNPs_12023 1 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:89985086-89985117
64251 chr17 635964 635964 1 + C G rs143771876 635952 + 635932 635972 41 CTTCGCGCTCTGCACCTGGGCGCTGCGCCGCTCCCAGCCCG CTTCGCGCTCTGCACCTGGGCGCTGCGCCGCTGCCAGCCCG < 41bp 1 0.663914135341863 1 0.430984050035477 experiment 0.672171729316274 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM57A ENSG00000167695 CDS Human protein_coding chr17:635952 chr17:635964 nonsynonymous SNV 0.016 0 33 hm5C_associated_SNPs_12027 0 0 2 DDX3X POSTAR2 ENCODE chr17:635919-635993
64251 chr17 635971 635971 1 + C G rs146853090 635952 + 635932 635972 41 CTTCGCGCTCTGCACCTGGGCGCTGCGCCGCTCCCAGCCCG CTTCGCGCTCTGCACCTGGGCGCTGCGCCGCTCCCAGCCGG < 41bp 1 0.689039846459098 1 0.301605373620987 experiment 0.621920307081803 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM57A ENSG00000167695 CDS Human protein_coding chr17:635952 chr17:635971 synonymous SNV . 0 40 hm5C_associated_SNPs_12028 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:635968-635998
64251 chr17 1658354 1658354 1 + T C rs567488309 1658339 + 1658319 1658359 41 GGCCTAACCTGCCGAGAGTCCATCAGCCTCCATCCTACCCC GGCCTAACCTGCCGAGAGTCCATCAGCCTCCATCCCACCCC < 41bp 1 0.783487279842284 1 0.0374190509319305 experiment 0.433025440315432 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658339 chr17:1658354 . . 0 36 hm5C_associated_SNPs_12036 0 0 1 PCBP2 POSTAR2 ENCODE chr17:1658347-1658487
64251 chr17 1658359 1658359 1 + C A rs552317098 1658339 + 1658319 1658359 41 GGCCTAACCTGCCGAGAGTCCATCAGCCTCCATCCTACCCC GGCCTAACCTGCCGAGAGTCCATCAGCCTCCATCCTACCCA < 41bp 1 0.748230952060503 1 0.0251156389713287 experiment 0.503538095878994 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658339 chr17:1658359 . . 0 41 hm5C_associated_SNPs_12037 0 0 1 PCBP2 POSTAR2 ENCODE chr17:1658347-1658487
64251 chr17 1733399 1733399 1 + A G rs5030749 1733413 + 1733393 1733433 41 CGGCCAACTGAGCGAGGGGGCCATTGCGGTGAGGAGGTGCC CGGCCAGCTGAGCGAGGGGGCCATTGCGGTGAGGAGGTGCC < 41bp 1 0.110997803503634 1 0.238330364227295 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1733413 chr17:1733399 synonymous SNV . 0 7 hm5C_associated_SNPs_12038 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:1733368-1733409
64251 chr17 1747885 1747885 1 + G A rs189644474 1747884 + 1747864 1747904 41 GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTCTCG GTTTTCAGCTTTCATGTTGGCAACACAGTTGAACCCTCTCG < 41bp 1 0.563067205468154 1 0.152354001998901 experiment 0.873865589063693 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1747884 chr17:1747885 synonymous SNV . 0 22 hm5C_associated_SNPs_12039 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1747869-1747959
64251 chr17 1801137 1801137 1 + G T rs1051315 1801122 + 1801102 1801142 41 AAAATTGTCTCTTCTGAGGACCGCTGATAAGCATTGACTTG AAAATTGTCTCTTCTGAGGACCGCTGATAAGCATTTACTTG < 41bp 1 0.13274557035671 1 0.0731055438518524 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPA1 ENSG00000132383 UTR3 Human protein_coding chr17:1801122 chr17:1801137 . . 0 36 hm5C_associated_SNPs_12040 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:1801037-1801162
64251 chr17 1801138 1801138 1 + A C rs1051318 1801122 + 1801102 1801142 41 AAAATTGTCTCTTCTGAGGACCGCTGATAAGCATTGACTTG AAAATTGTCTCTTCTGAGGACCGCTGATAAGCATTGCCTTG < 41bp 1 0.170883627845671 1 0.116237491369247 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPA1 ENSG00000132383 UTR3 Human protein_coding chr17:1801122 chr17:1801138 . . 0 37 hm5C_associated_SNPs_12041 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:1801037-1801162
64251 chr17 2240878 2240878 1 + C T rs113461397 2240888 + 2240868 2240908 41 GGGAGCGCGGCGGGCGGGGGCTCCGCCTTGCGCGTGGGGCG GGGAGCGCGGTGGGCGGGGGCTCCGCCTTGCGCGTGGGGCG < 41bp 1 0.676197661860512 1 0.496477991342545 experiment 0.647604676278976 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SGSM2 ENSG00000141258 UTR5 Human protein_coding chr17:2240888 chr17:2240878 . . 0 11 hm5C_associated_SNPs_12042 0 0 4 GEMIN5 POSTAR2 ENCODE chr17:2240870-2240950
64251 chr17 2266381 2266381 1 + G T rs112097002 2266362 + 2266342 2266382 41 CCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGG CCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGTG < 41bp 1 0.152937678308574 1 0.218549787998199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266362 chr17:2266381 nonsynonymous SNV 0.914 4 40 hm5C_associated_SNPs_12043 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2266373-2266401
64251 chr17 2266381 2266381 1 + G T rs112097002 2266363 + 2266343 2266383 41 CCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGGT CCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGTGT < 41bp 1 0.510032569020281 1 0.631483852863312 experiment 0.979934861959438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266363 chr17:2266381 nonsynonymous SNV 0.914 4 39 hm5C_associated_SNPs_12044 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2266373-2266401
64251 chr17 2541480 2541480 1 + T C rs533089397 2541477 + 2541457 2541497 41 ATTTTCCCCTGTGTGGAAGACACTTAGTGGCATATTTAAAT ATTTTCCCCTGTGTGGAAGACACCTAGTGGCATATTTAAAT < 41bp 1 0.337807775562646 1 0.0292070508003235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAFAH1B1 ENSG00000007168 UTR5 Human protein_coding chr17:2541477 chr17:2541480 . . 0 24 hm5C_associated_SNPs_12045 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:2541415-2541487
64251 chr17 2585948 2585948 1 + A G rs144602512 2585961 + 2585941 2585981 41 GTGTGTCATGGTACAAATCACTATTCGTTTTTGGTGTTTTT GTGTGTCGTGGTACAAATCACTATTCGTTTTTGGTGTTTTT < 41bp 1 0.0735019182079949 1 0.0454476475715637 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAFAH1B1 ENSG00000007168 UTR3 Human protein_coding chr17:2585961 chr17:2585948 . . 0 8 hm5C_associated_SNPs_12046 1 0 14 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:2585752-2585971
64251 chr17 3629843 3629843 1 + C T rs190744073 3629847 + 3629827 3629867 41 AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCTGTAG AAAGAAGTAAACTAGCTGGGCACAGTGGCGTGCGCCTGTAG < 41bp 1 0.695939621818331 1 0.316081285476685 experiment 0.608120756363338 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629847 chr17:3629843 . . 0 17 hm5C_associated_SNPs_12047 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:3629821-3629853
64251 chr17 3629848 3629848 1 + A G rs9896869 3629847 + 3629827 3629867 41 AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCTGTAG AAAGAAGTAAACTAGCCGGGCGCAGTGGCGTGCGCCTGTAG < 41bp 1 0.687001987491037 1 0.463645875453949 experiment 0.625996025017926 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629847 chr17:3629848 . . 0 22 hm5C_associated_SNPs_12048 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:3629821-3629853
64251 chr17 3629859 3629859 1 + C T rs72825407 3629843 + 3629823 3629863 41 TCTGAAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCT TCTGAAAGAAGTAAACTAGCCGGGCACAGTGGCGTGTGCCT < 41bp 1 0.749301026497113 1 0.695350646972656 experiment 0.501397947005774 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629843 chr17:3629859 . . 0 37 hm5C_associated_SNPs_12049 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629859 3629859 1 + C T rs72825407 3629847 + 3629827 3629867 41 AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCTGTAG AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGTGCCTGTAG < 41bp 1 0.66183794829342 1 0.198714464902878 experiment 0.67632410341316 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629847 chr17:3629859 . . 0 33 hm5C_associated_SNPs_12050 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629859 3629859 1 + C T rs72825407 3629870 + 3629850 3629890 41 AGTGGCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG AGTGGCGTGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG < 41bp 1 0.45529584868363 1 0.470113813877106 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629870 chr17:3629859 . . 0 10 hm5C_associated_SNPs_12051 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629859 3629859 1 + C T rs72825407 3629871 + 3629851 3629891 41 GTGGCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG GTGGCGTGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG < 41bp 1 0.646135442428542 1 0.803747951984406 experiment 0.707729115142916 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629871 chr17:3629859 . . 0 9 hm5C_associated_SNPs_12052 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629859 3629859 1 + C T rs72825407 3629874 + 3629854 3629894 41 GCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAG GCGTGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAG < 41bp 1 0.474631729544096 1 0.172777503728867 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629874 chr17:3629859 . . 0 6 hm5C_associated_SNPs_12053 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629867 3629867 1 + G A rs178322 3629847 + 3629827 3629867 41 AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCTGTAG AAAGAAGTAAACTAGCCGGGCACAGTGGCGTGCGCCTGTAA < 41bp 1 0.667238732268221 1 0.338166892528534 experiment 0.665522535463559 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629847 chr17:3629867 . . 0 41 hm5C_associated_SNPs_12054 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629867 3629867 1 + G A rs178322 3629870 + 3629850 3629890 41 AGTGGCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG AGTGGCGTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAG < 41bp 1 0.509596146375383 1 0.71562385559082 experiment 0.980807707249234 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629870 chr17:3629867 . . 0 18 hm5C_associated_SNPs_12055 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629867 3629867 1 + G A rs178322 3629871 + 3629851 3629891 41 GTGGCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG GTGGCGTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGG < 41bp 1 0.686918461877151 1 0.856077313423157 experiment 0.626163076245697 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629871 chr17:3629867 . . 0 17 hm5C_associated_SNPs_12056 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629867 3629867 1 + G A rs178322 3629874 + 3629854 3629894 41 GCGTGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAG GCGTGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAG < 41bp 1 0.432800931881196 1 0.0850963890552521 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629874 chr17:3629867 . . 0 14 hm5C_associated_SNPs_12057 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 3629867 3629867 1 + G A rs178322 3629877 + 3629857 3629897 41 TGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAG TGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAG < 41bp 1 0.794212870357049 1 0.455074310302734 experiment 0.411574259285903 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629877 chr17:3629867 . . 0 11 hm5C_associated_SNPs_12058 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:3629830-3629867
64251 chr17 4053224 4053224 1 + C G rs189292607 4053212 + 4053192 4053232 41 CGCATCCAGAGCTTTCGTGACCGGGGACTGTTCTGAAGCAG CGCATCCAGAGCTTTCGTGACCGGGGACTGTTGTGAAGCAG < 41bp 1 0.626808243880949 1 0.876533627510071 experiment 0.746383512238103 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4053212 chr17:4053224 nonsynonymous SNV 0.978 3 33 hm5C_associated_SNPs_12060 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:4053212-4053224
64251 chr17 4712615 4712615 1 + A G rs202012648 4712616 + 4712596 4712636 41 TACCTGGAGAATTACCTCAACCGTCTCTTGACCATGTCTTT TACCTGGAGAATTACCTCAGCCGTCTCTTGACCATGTCTTT < 41bp 1 0.0214350463155222 1 0.28364160656929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4712616 chr17:4712615 nonsynonymous SNV 0.998 3 20 hm5C_associated_SNPs_12062 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:4712592-4712615
64251 chr17 4712617 4712617 1 + C T rs2286672 4712616 + 4712596 4712636 41 TACCTGGAGAATTACCTCAACCGTCTCTTGACCATGTCTTT TACCTGGAGAATTACCTCAACTGTCTCTTGACCATGTCTTT < 41bp 1 0.0659316058374709 1 0.150715529918671 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4712616 chr17:4712617 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_12063 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:4712581-4712664
64251 chr17 4720033 4720033 1 + C T rs145073180 4720020 + 4720000 4720040 41 TTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAA TTATCACCAAGGACTGGGTGCAGCTGGACCGGCTTTTCGAA < 41bp 1 0.31528912000139 1 0.115084201097488 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4720020 chr17:4720033 nonsynonymous SNV 0.996 3 34 hm5C_associated_SNPs_12064 0 0 1 PPIG POSTAR2 ENCODE chr17:4720009-4720039
64251 chr17 4797361 4797361 1 + C T rs56279314 4797353 + 4797333 4797373 41 AGGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC AGGAGATCACCGGGACCCAGCCCCCATATGGGGGCGGCACC < 41bp 1 0.0782738964413894 1 0.0588870048522949 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797353 chr17:4797361 synonymous SNV . 0 29 hm5C_associated_SNPs_12065 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797361 4797361 1 + C T rs56279314 4797354 + 4797334 4797374 41 GGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCA GGAGATCACCGGGACCCAGCCCCCATATGGGGGCGGCACCA < 41bp 1 0.491819260510311 1 0.847740769386292 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797354 chr17:4797361 synonymous SNV . 0 28 hm5C_associated_SNPs_12066 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797361 4797361 1 + C T rs56279314 4797355 + 4797335 4797375 41 GAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCAT GAGATCACCGGGACCCAGCCCCCATATGGGGGCGGCACCAT < 41bp 1 0.102910196435144 1 0.296115875244141 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797355 chr17:4797361 synonymous SNV . 0 27 hm5C_associated_SNPs_12067 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797361 4797361 1 + C T rs56279314 4797356 + 4797336 4797376 41 AGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATG AGATCACCGGGACCCAGCCCCCATATGGGGGCGGCACCATG < 41bp 1 0.126078716423443 1 0.181475907564163 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797356 chr17:4797361 synonymous SNV . 0 26 hm5C_associated_SNPs_12068 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797361 4797361 1 + C T rs56279314 4797357 + 4797337 4797377 41 GATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATGG GATCACCGGGACCCAGCCCCCATATGGGGGCGGCACCATGG < 41bp 1 0.190009236832274 1 0.324761211872101 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797357 chr17:4797361 synonymous SNV . 0 25 hm5C_associated_SNPs_12069 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797361 4797361 1 + C T rs56279314 4797367 + 4797347 4797387 41 ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG ACCCAGCCCCCATATGGGGGCGGCACCATGGTGGTCCAGCG < 41bp 1 0.447329379094267 1 0.248428523540497 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797367 chr17:4797361 synonymous SNV . 0 15 hm5C_associated_SNPs_12070 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4856376 4856376 1 + A G rs238238 4856386 + 4856366 4856406 41 AACATCAACAATACTCTGGGCCCTGCTCTGCTGCAAAAGGC AACATCAACAGTACTCTGGGCCCTGCTCTGCTGCAAAAGGC < 41bp 1 0.0754226825513369 1 0.122461467981339 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856386 chr17:4856376 nonsynonymous SNV 0.997 0 11 hm5C_associated_SNPs_12071 2 1 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:4856340-4856380
64251 chr17 4856390 4856390 1 + G C rs143945974 4856386 + 4856366 4856406 41 AACATCAACAATACTCTGGGCCCTGCTCTGCTGCAAAAGGC AACATCAACAATACTCTGGGCCCTCCTCTGCTGCAAAAGGC < 41bp 1 0.0222364583834786 1 0.0793352127075195 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856386 chr17:4856390 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_12072 2 0 3 BUD13 POSTAR2 ENCODE chr17:4856355-4856412
64251 chr17 4856580 4856580 1 + T C rs238239 4856570 + 4856550 4856590 41 CAAACTCACCCTTCCAGAAACTAAGCGTTGTGGATCAAGAA CAAACTCACCCTTCCAGAAACTAAGCGTTGCGGATCAAGAA < 41bp 1 0.19777864546412 1 0.137696832418442 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856570 chr17:4856580 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_12073 2 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4856571-4856598
64251 chr17 4859364 4859364 1 + C T rs2230257 4859344 + 4859324 4859364 41 ATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCC ATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCT < 41bp 1 0.522749245927658 1 0.405509471893311 experiment 0.954501508144684 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859344 chr17:4859364 synonymous SNV . 0 41 hm5C_associated_SNPs_12074 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859345 + 4859325 4859365 41 TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCCG TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCTG < 41bp 1 0.211612381545924 1 0.287932217121124 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859345 chr17:4859364 synonymous SNV . 0 40 hm5C_associated_SNPs_12075 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859357 + 4859337 4859377 41 CACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGG CACCAACCCCAAGAGGATTGCCCAGGCTGTTGAGAAGAAGG < 41bp 1 0.231656725366409 1 0.0801554024219513 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859357 chr17:4859364 synonymous SNV . 0 28 hm5C_associated_SNPs_12076 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859358 + 4859338 4859378 41 ACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGC ACCAACCCCAAGAGGATTGCCCAGGCTGTTGAGAAGAAGGC < 41bp 1 0.364824947211001 1 0.180778324604034 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859358 chr17:4859364 synonymous SNV . 0 27 hm5C_associated_SNPs_12077 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859359 + 4859339 4859379 41 CCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCC CCAACCCCAAGAGGATTGCCCAGGCTGTTGAGAAGAAGGCC < 41bp 1 0.482203135197092 1 0.717622756958008 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859359 chr17:4859364 synonymous SNV . 0 26 hm5C_associated_SNPs_12078 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859363 + 4859343 4859383 41 CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA CCCCAAGAGGATTGCCCAGGCTGTTGAGAAGAAGGCCTGCA < 41bp 1 0.34103574123648 1 0.107280939817429 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859363 chr17:4859364 synonymous SNV . 0 22 hm5C_associated_SNPs_12079 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCAGGCTGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA < 41bp 1 0.136367374189168 1 0.0723675191402435 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859364 synonymous SNV . 0 7 hm5C_associated_SNPs_12080 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CAGGCTGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA < 41bp 1 0.755116594811489 1 0.127392321825027 experiment 0.489766810377023 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859364 synonymous SNV . 0 6 hm5C_associated_SNPs_12081 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859364 4859364 1 + C T rs2230257 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCTGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT < 41bp 1 0.535579486433786 1 0.101447224617004 experiment 0.928841027132428 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859364 synonymous SNV . 0 3 hm5C_associated_SNPs_12082 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859345 + 4859325 4859365 41 TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCCG TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCCA < 41bp 1 0.191190264117602 1 0.248302429914474 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859345 chr17:4859365 nonsynonymous SNV 0.997 0 41 hm5C_associated_SNPs_12083 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859357 + 4859337 4859377 41 CACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGG CACCAACCCCAAGAGGATTGCCCAGGCCATTGAGAAGAAGG < 41bp 1 0.237399176792241 1 0.0590374171733856 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859357 chr17:4859365 nonsynonymous SNV 0.997 0 29 hm5C_associated_SNPs_12084 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859358 + 4859338 4859378 41 ACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGC ACCAACCCCAAGAGGATTGCCCAGGCCATTGAGAAGAAGGC < 41bp 1 0.273082618266427 1 0.330487161874771 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859358 chr17:4859365 nonsynonymous SNV 0.997 0 28 hm5C_associated_SNPs_12085 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859359 + 4859339 4859379 41 CCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCC CCAACCCCAAGAGGATTGCCCAGGCCATTGAGAAGAAGGCC < 41bp 1 0.397884466065457 1 0.438932120800018 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859359 chr17:4859365 nonsynonymous SNV 0.997 0 27 hm5C_associated_SNPs_12086 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859363 + 4859343 4859383 41 CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA CCCCAAGAGGATTGCCCAGGCCATTGAGAAGAAGGCCTGCA < 41bp 1 0.0991913214614416 1 0.0716718733310699 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859363 chr17:4859365 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_12087 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859364 + 4859344 4859384 41 CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA CCCAAGAGGATTGCCCAGGCCATTGAGAAGAAGGCCTGCAA < 41bp 1 0.220977662888377 1 0.131863296031952 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859364 chr17:4859365 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_12088 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCAGGCCATTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA < 41bp 1 0.128329015730899 1 0.0538194179534912 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859365 nonsynonymous SNV 0.997 0 8 hm5C_associated_SNPs_12089 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CAGGCCATTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA < 41bp 1 0.756756068797074 1 0.113594084978104 experiment 0.486487862405851 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859365 nonsynonymous SNV 0.997 0 7 hm5C_associated_SNPs_12090 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCCATTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT < 41bp 1 0.474435605684977 1 0.132857322692871 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859365 nonsynonymous SNV 0.997 0 4 hm5C_associated_SNPs_12091 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859365 4859365 1 + G A rs61735456 4859385 + 4859365 4859405 41 GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA ATTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA < 41bp 1 0.4558105751811 1 0.0923383235931396 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859385 chr17:4859365 nonsynonymous SNV 0.997 0 1 hm5C_associated_SNPs_12092 2 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859412 4859412 1 + C T rs114208569 4859392 + 4859372 4859412 41 AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATC AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATT < 41bp 1 0.361308971020338 1 0.195183604955673 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859392 chr17:4859412 synonymous SNV . 0 41 hm5C_associated_SNPs_12093 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859412 4859412 1 + C T rs114208569 4859403 + 4859383 4859423 41 AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC AACTGTCTGCTGCTGAAGGTCAACCAGATTGGCTCGGTGAC < 41bp 1 0.366458154370764 1 0.207307249307632 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859403 chr17:4859412 synonymous SNV . 0 30 hm5C_associated_SNPs_12094 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859412 4859412 1 + C T rs114208569 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATTGGCTCGGTGACCGAATCGATCCAGGCGTGAG < 41bp 1 0.521932091666623 1 0.155814230442047 experiment 0.956135816666754 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859412 synonymous SNV . 0 10 hm5C_associated_SNPs_12095 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859412 4859412 1 + C T rs114208569 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATTGGCTCGGTGACCGAATCGATCCAGGCGTGAGT < 41bp 1 0.391685921481744 1 0.763375580310822 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859412 synonymous SNV . 0 9 hm5C_associated_SNPs_12096 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859418 4859418 1 + G A rs527864393 4859403 + 4859383 4859423 41 AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCAGTGAC < 41bp 1 0.403461215931372 1 0.238792032003403 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859403 chr17:4859418 synonymous SNV . 0 36 hm5C_associated_SNPs_12097 1 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859418 4859418 1 + G A rs527864393 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCAGTGACCGAATCGATCCAGGCGTGAG < 41bp 1 0.519837916328788 1 0.117825120687485 experiment 0.960324167342425 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859418 synonymous SNV . 0 16 hm5C_associated_SNPs_12098 1 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859418 4859418 1 + G A rs527864393 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCAGTGACCGAATCGATCCAGGCGTGAGT < 41bp 1 0.386493772967423 1 0.720782399177551 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859418 synonymous SNV . 0 15 hm5C_associated_SNPs_12099 1 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859889 4859889 1 + T C rs533687145 4859885 + 4859865 4859905 41 CAGGTGCAAACTGGCTCAGTCTAATGGCTGGGGGGTGATGG CAGGTGCAAACTGGCTCAGTCTAACGGCTGGGGGGTGATGG < 41bp 1 0.257780562730096 1 0.0913253426551819 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859885 chr17:4859889 synonymous SNV . 0 25 hm5C_associated_SNPs_12100 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:4859881-4859932
64251 chr17 4901244 4901244 1 + C G rs566687755 4901256 + 4901236 4901276 41 TCCCGCCCCAGCTCGCGCTGCCCGGGCGGGCGCCGGCCGCT TCCCGCCCGAGCTCGCGCTGCCCGGGCGGGCGCCGGCCGCT < 41bp 1 0.620498499260704 1 0.23760262131691 experiment 0.759003001478593 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1C ENSG00000129250 UTR5 Human protein_coding chr17:4901256 chr17:4901244 . . 0 9 hm5C_associated_SNPs_12101 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:4901240-4901260
64251 chr17 4901244 4901244 1 + C G rs566687755 4901262 + 4901242 4901282 41 CCCAGCTCGCGCTGCCCGGGCGGGCGCCGGCCGCTGGCGCC CCGAGCTCGCGCTGCCCGGGCGGGCGCCGGCCGCTGGCGCC < 41bp 1 0.790288900371514 1 0.892601251602173 experiment 0.419422199256973 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1C ENSG00000129250 UTR5 Human protein_coding chr17:4901262 chr17:4901244 . . 0 3 hm5C_associated_SNPs_12102 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:4901240-4901260
64251 chr17 4905377 4905377 1 + C A rs138692366 4905366 + 4905346 4905386 41 CCCTCCAGCTCTGTGAGGACCTCTTCTCTCGCGTTAGTGAG CCCTCCAGCTCTGTGAGGACCTCTTCTCTCGAGTTAGTGAG < 41bp 1 0.0912866739935913 1 0.0463910102844238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905366 chr17:4905377 synonymous SNV . 0 32 hm5C_associated_SNPs_12103 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:4905360-4905380
64251 chr17 4923851 4923851 1 + G A rs78356534 4923870 + 4923850 4923890 41 TGGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACCGCCC TAGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACCGCCC < 41bp 1 0.119057585119261 1 0.10008242726326 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4923870 chr17:4923851 synonymous SNV . 0 2 hm5C_associated_SNPs_12104 1 0 2 DDX24 POSTAR2 ENCODE chr17:4923791-4923859
64251 chr17 4926860 4926860 1 + C A rs78970955 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCAGTCAGCCCGGCCCCCCTCGCCACCACTGTCA < 41bp 1 0.063015400054192 1 0.0317761301994324 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926860 nonsynonymous SNV 0.002 1 10 hm5C_associated_SNPs_12105 1 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4926836-4926861
64251 chr17 4926860 4926860 1 + C A rs78970955 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCAGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC < 41bp 1 0.10179929919069 1 0.0194081366062164 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926860 nonsynonymous SNV 0.002 1 7 hm5C_associated_SNPs_12106 1 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4926836-4926861
64251 chr17 4926860 4926860 1 + C A rs78970955 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG AGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG < 41bp 1 0.101183507081105 1 0.23059493303299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926860 nonsynonymous SNV 0.002 1 1 hm5C_associated_SNPs_12107 1 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4926836-4926861
64251 chr17 4926882 4926882 1 + A G rs346828 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCGCCACTGTCA < 41bp 1 0.0756128277492745 1 0.0296020209789276 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926882 synonymous SNV . 0 32 hm5C_associated_SNPs_12108 1 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926882 4926882 1 + A G rs346828 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCCGTCAGCCCGGCCCCCCTCGCCGCCACTGTCAAGC < 41bp 1 0.0922966504573643 1 0.04963019490242 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926882 synonymous SNV . 0 29 hm5C_associated_SNPs_12109 1 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926882 4926882 1 + A G rs346828 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG CGTCAGCCCGGCCCCCCTCGCCGCCACTGTCAAGCTGGGAG < 41bp 1 0.160904987535157 1 0.250459581613541 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926882 synonymous SNV . 0 23 hm5C_associated_SNPs_12110 1 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926882 4926882 1 + A G rs346828 4926883 + 4926863 4926903 41 CAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG CAGCCCGGCCCCCCTCGCCGCCACTGTCAAGCTGGGAGCGG < 41bp 1 0.135569272328369 1 0.0492443740367889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926883 chr17:4926882 synonymous SNV . 0 20 hm5C_associated_SNPs_12111 1 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4927837 4927837 1 + T C rs143895411 4927822 + 4927802 4927842 41 AGAGTGAGGCAAGTTCTCCCCAGCCCCTGTCCGTCTGTCTG AGAGTGAGGCAAGTTCTCCCCAGCCCCTGTCCGTCCGTCTG < 41bp 1 0.252821305840143 1 0.305024206638336 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1C ENSG00000129250 UTR3 Human protein_coding chr17:4927822 chr17:4927837 . . 0 36 hm5C_associated_SNPs_12112 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4927803-4927887
64251 chr17 5286761 5286761 1 + G A rs563022596 5286768 + 5286748 5286788 41 GATTCCAACAGGCGTGGGATCAGATTTGGTGATGGAAAAAG GATTCCAACAGGCATGGGATCAGATTTGGTGATGGAAAAAG < 41bp 1 0.589328319394199 1 0.397311449050903 experiment 0.821343361211603 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RABEP1 ENSG00000029725 UTR3 Human protein_coding chr17:5286768 chr17:5286761 . . 0 14 hm5C_associated_SNPs_12126 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:5286760-5286822
64251 chr17 5286844 5286844 1 + C T rs188091510 5286857 + 5286837 5286877 41 TCCCTACCCTAAAGCGACATCCCAGTAGTGTTTGGAATTTT TCCCTACTCTAAAGCGACATCCCAGTAGTGTTTGGAATTTT < 41bp 1 0.202653721879811 1 0.0796626806259155 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RABEP1 ENSG00000029725 UTR3 Human protein_coding chr17:5286857 chr17:5286844 . . 0 8 hm5C_associated_SNPs_12127 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr17:5286788-5286853
64251 chr17 5393007 5393007 1 + G C rs74582818 5393027 + 5393007 5393047 41 GGCTGAAGCATCTGAGTCTTCTAATAAGTGGGAAGGGATCC CGCTGAAGCATCTGAGTCTTCTAATAAGTGGGAAGGGATCC < 41bp 1 0.523951844821756 1 0.0904748439788818 experiment 0.952096310356487 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIS12 ENSG00000167842 UTR3 Human protein_coding chr17:5393027 chr17:5393007 . . 0 1 hm5C_associated_SNPs_12135 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:5392962-5393066
64251 chr17 6012979 6012979 1 + C A rs41314099 6012962 + 6012942 6012982 41 ATTCTCAGGGGCTGGGAATGCTACTGTGCTTACCCTACCCC ATTCTCAGGGGCTGGGAATGCTACTGTGCTTACCCTAACCC < 41bp 1 0.617354673738914 1 0.304381668567657 experiment 0.765290652522172 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6012962 chr17:6012979 nonsynonymous SNV 0.994 4 38 hm5C_associated_SNPs_12137 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:6012963-6012986
64251 chr17 6347784 6347784 1 + C A rs113798672 6347770 + 6347750 6347790 41 CGGCTGCGGTGGGCGAGGAGCAGCTGTGCTGCGGCTGTGCT CGGCTGCGGTGGGCGAGGAGCAGCTGTGCTGCGGATGTGCT < 41bp 1 0.632907173448141 1 0.739773631095886 experiment 0.734185653103718 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIMREG ENSG00000129195 UTR5 Human protein_coding chr17:6347770 chr17:6347784 . . 0 35 hm5C_associated_SNPs_12138 0 0 2 DDX3X POSTAR2 ENCODE chr17:6347754-6347804
64251 chr17 6347787 6347787 1 + T C rs111391756 6347770 + 6347750 6347790 41 CGGCTGCGGTGGGCGAGGAGCAGCTGTGCTGCGGCTGTGCT CGGCTGCGGTGGGCGAGGAGCAGCTGTGCTGCGGCTGCGCT < 41bp 1 0.729429139337037 1 0.823102474212646 experiment 0.541141721325927 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIMREG ENSG00000129195 UTR5 Human protein_coding chr17:6347770 chr17:6347787 . . 0 38 hm5C_associated_SNPs_12139 0 0 2 DDX3X POSTAR2 ENCODE chr17:6347754-6347804
64251 chr17 7155861 7155861 1 + G A rs2521988 7155860 + 7155840 7155880 41 GCCAGAGCAGGGACCGGACGCGAGTTGGAGATGTTGGACTC GCCAGAGCAGGGACCGGACGCAAGTTGGAGATGTTGGACTC < 41bp 1 0.777667553570688 1 0.765186965465546 experiment 0.444664892858625 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7155860 chr17:7155861 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_12140 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819214 chr17:7155840-7155880
64251 chr17 7163137 7163137 1 + G A rs548498221 7163120 + 7163100 7163140 41 CCTGCCCCACCTTGGTTCCCCTTGTCTATGGAGCCCCGCCT CCTGCCCCACCTTGGTTCCCCTTGTCTATGGAGCCCCACCT < 41bp 1 0.486160043496102 1 0.0245595574378967 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ELP5 ENSG00000170291 UTR3 Human protein_coding chr17:7163120 chr17:7163137 . . 0 38 hm5C_associated_SNPs_12141 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr17:7163114-7163156
64251 chr17 7215385 7215385 1 + C T rs185404236 7215370 + 7215350 7215390 41 TGAAGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGG TGAAGCTGCCCTCCTCTTCTCCCCTCACACTACAGTCCTGG < 41bp 1 0.230977063463142 1 0.0636996328830719 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 UTR3 Human protein_coding chr17:7215370 chr17:7215385 . . 0 36 hm5C_associated_SNPs_12142 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7215245-7215389
64251 chr17 7215385 7215385 1 + C T rs185404236 7215371 + 7215351 7215391 41 GAAGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGGT GAAGCTGCCCTCCTCTTCTCCCCTCACACTACAGTCCTGGT < 41bp 1 0.055727560442809 1 0.0747706592082977 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 UTR3 Human protein_coding chr17:7215371 chr17:7215385 . . 0 35 hm5C_associated_SNPs_12143 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7215245-7215389
64251 chr17 7215385 7215385 1 + C T rs185404236 7215372 + 7215352 7215392 41 AAGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGGTG AAGCTGCCCTCCTCTTCTCCCCTCACACTACAGTCCTGGTG < 41bp 1 0.257553078274733 1 0.0819210708141327 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 UTR3 Human protein_coding chr17:7215372 chr17:7215385 . . 0 34 hm5C_associated_SNPs_12144 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7215245-7215389
64251 chr17 7215385 7215385 1 + C T rs185404236 7215373 + 7215353 7215393 41 AGCTGCCCTCCTCTTCTCCCCTCACACTACAGCCCTGGTGG AGCTGCCCTCCTCTTCTCCCCTCACACTACAGTCCTGGTGG < 41bp 1 0.272692350073505 1 0.634450137615204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 UTR3 Human protein_coding chr17:7215373 chr17:7215385 . . 0 33 hm5C_associated_SNPs_12145 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7215245-7215389
64251 chr17 7402672 7402672 1 + G A rs139080732 7402691 + 7402671 7402711 41 CGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATG CACGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATG < 41bp 1 0.382679301007915 1 0.651486992835999 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7402691 chr17:7402672 synonymous SNV . 0 2 hm5C_associated_SNPs_12148 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr17:7402603-7402672
64251 chr17 7465339 7465339 1 + C G rs11654859 7465342 + 7465322 7465362 41 GGCGGTGGCGCTGGTGGCGGCGGTGGCGGAGGTGGAGGTGG GGCGGTGGCGCTGGTGGGGGCGGTGGCGGAGGTGGAGGTGG < 41bp 1 0.704713336010581 1 0.819312155246735 experiment 0.590573327978838 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SENP3-EIF4A1 ENSG00000161956 UTR5 Human protein_coding chr17:7465342 chr17:7465339 . . 0 18 hm5C_associated_SNPs_12151 0 0 6 DDX3X POSTAR2 ENCODE chr17:7465277-7465350
64251 chr17 7477935 7477935 1 + C T rs141818062 7477921 + 7477901 7477941 41 TGAACCTCTCGGAGTCCCTTCTCCGTGGCATCTACGCGTAT TGAACCTCTCGGAGTCCCTTCTCCGTGGCATCTATGCGTAT < 41bp 1 0.490606488516484 1 0.959011197090149 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7477921 chr17:7477935 synonymous SNV . 0 35 hm5C_associated_SNPs_12152 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7477902-7477936
64251 chr17 7477938 7477938 1 + G A rs1057086 7477921 + 7477901 7477941 41 TGAACCTCTCGGAGTCCCTTCTCCGTGGCATCTACGCGTAT TGAACCTCTCGGAGTCCCTTCTCCGTGGCATCTACGCATAT < 41bp 1 0.500220192206849 1 0.930318117141724 experiment 0.999559615586303 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7477921 chr17:7477938 synonymous SNV . 0 38 hm5C_associated_SNPs_12153 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:7477920-7477940
64251 chr17 7478498 7478498 1 + G A rs7358 7478497 + 7478477 7478517 41 AACGGCCACATTTGCCATATCGATTCTGCAGCAGATTGAAT AACGGCCACATTTGCCATATCAATTCTGCAGCAGATTGAAT < 41bp 1 0.077942211616954 1 0.121469557285309 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7478497 chr17:7478498 synonymous SNV . 0 22 hm5C_associated_SNPs_12154 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:7478421-7478514
64251 chr17 7479892 7479892 1 + C T rs11078698 7479886 + 7479866 7479906 41 GGAGACTACATGGGCGCCTCCTGTCACGCCTGTATCGGGGG GGAGACTACATGGGCGCCTCCTGTCATGCCTGTATCGGGGG < 41bp 1 0.230524458858828 1 0.364945232868195 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479886 chr17:7479892 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_12155 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479892 7479892 1 + C T rs11078698 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCGCCTCCTGTCATGCCTGTATCGGGGGCACCAACGT < 41bp 1 0.647387145748961 1 0.243674218654633 experiment 0.705225708502077 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479892 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_12156 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479892 7479892 1 + C T rs11078698 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCATGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT < 41bp 1 0.54097175086047 1 0.2534299492836 experiment 0.91805649827906 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479892 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_12157 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479892 7479892 1 + C T rs11078698 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCATGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC < 41bp 1 0.125089241628519 1 0.154397666454315 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479892 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_12158 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479892 7479892 1 + C T rs11078698 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CATGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA < 41bp 1 0.474531932660383 1 0.294010400772095 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479892 nonsynonymous SNV . 0 3 hm5C_associated_SNPs_12159 0 0 38 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479901 7479901 1 + C A rs550885428 7479886 + 7479866 7479906 41 GGAGACTACATGGGCGCCTCCTGTCACGCCTGTATCGGGGG GGAGACTACATGGGCGCCTCCTGTCACGCCTGTATAGGGGG < 41bp 1 0.153109004554392 1 0.353808522224426 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479886 chr17:7479901 synonymous SNV . 0 36 hm5C_associated_SNPs_12160 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7479901 7479901 1 + C A rs550885428 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCGCCTCCTGTCACGCCTGTATAGGGGGCACCAA < 41bp 1 0.66355302977867 1 0.0794467329978943 experiment 0.67289394044266 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479901 synonymous SNV . 0 30 hm5C_associated_SNPs_12161 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7479901 7479901 1 + C A rs550885428 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCGCCTCCTGTCACGCCTGTATAGGGGGCACCAACGT < 41bp 1 0.583506005264586 1 0.538746118545532 experiment 0.832987989470829 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479901 synonymous SNV . 0 27 hm5C_associated_SNPs_12162 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7479901 7479901 1 + C A rs550885428 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCACGCCTGTATAGGGGGCACCAACGTGCGTGCTGAGGT < 41bp 1 0.51092468075184 1 0.137567311525345 experiment 0.978150638496319 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479901 synonymous SNV . 0 15 hm5C_associated_SNPs_12163 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7479901 7479901 1 + C A rs550885428 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATAGGGGGCACCAACGTGCGTGCTGAGGTGC < 41bp 1 0.10839848606202 1 0.171687066555023 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479901 synonymous SNV . 0 13 hm5C_associated_SNPs_12164 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7479901 7479901 1 + C A rs550885428 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATAGGGGGCACCAACGTGCGTGCTGAGGTGCA < 41bp 1 0.401616295212454 1 0.175630241632462 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479901 synonymous SNV . 0 12 hm5C_associated_SNPs_12165 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr17 7480000 7480000 1 + G A rs61730297 7480007 + 7479987 7480027 41 ATATGCTTAACCGGAGATACCTGTGTGAGTAATTCGGTTCT ATATGCTTAACCGAAGATACCTGTGTGAGTAATTCGGTTCT < 41bp 1 0.42287279058511 1 0.0482604205608368 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480007 chr17:7480000 synonymous SNV . 0 14 hm5C_associated_SNPs_12166 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:7479863-7480009
64251 chr17 7480240 7480240 1 + G A rs147550900 7480223 + 7480203 7480243 41 TTCCCAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGGGCA TTCCCAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGAGCA < 41bp 1 0.554881950043171 1 0.600936055183411 experiment 0.890236099913657 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480223 chr17:7480240 . . 0 38 hm5C_associated_SNPs_12167 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480240 7480240 1 + G A rs147550900 7480227 + 7480207 7480247 41 CAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGG CAGGGCTGTTGTCTGCCTGGCGGGAAGGTCCTGAGCAAAGG < 41bp 1 0.634764316226817 1 0.720837116241455 experiment 0.730471367546366 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480227 chr17:7480240 . . 0 34 hm5C_associated_SNPs_12168 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480240 7480240 1 + G A rs147550900 7480236 + 7480216 7480256 41 TGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTT TGTCTGCCTGGCGGGAAGGTCCTGAGCAAAGGATCAGTCTT < 41bp 1 0.304524396233758 1 0.0647019445896149 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480236 chr17:7480240 . . 0 25 hm5C_associated_SNPs_12169 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480240 7480240 1 + G A rs147550900 7480242 + 7480222 7480262 41 CCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACT CCTGGCGGGAAGGTCCTGAGCAAAGGATCAGTCTTTGTACT < 41bp 1 0.476702745419391 1 0.581599652767181 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480242 chr17:7480240 . . 0 19 hm5C_associated_SNPs_12170 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480240 7480240 1 + G A rs147550900 7480250 + 7480230 7480270 41 GAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGC GAAGGTCCTGAGCAAAGGATCAGTCTTTGTACTCTGAGAGC < 41bp 1 0.113547553059406 1 0.259239792823792 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480250 chr17:7480240 . . 0 11 hm5C_associated_SNPs_12171 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480240 7480240 1 + G A rs147550900 7480254 + 7480234 7480274 41 GTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGAC GTCCTGAGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGAC < 41bp 1 0.124205187384001 1 0.150315135717392 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480254 chr17:7480240 . . 0 7 hm5C_associated_SNPs_12172 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr17 7480255 7480255 1 + T C rs75736809 7480236 + 7480216 7480256 41 TGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTT TGTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCCT < 41bp 1 0.226846855024532 1 0.178475439548492 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480236 chr17:7480255 . . 0 40 hm5C_associated_SNPs_12173 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480242 + 7480222 7480262 41 CCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTTGTACT CCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCCTTGTACT < 41bp 1 0.421199356780731 1 0.644372582435608 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480242 chr17:7480255 . . 0 34 hm5C_associated_SNPs_12174 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480250 + 7480230 7480270 41 GAAGGTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGC GAAGGTCCTGGGCAAAGGATCAGTCCTTGTACTCTGAGAGC < 41bp 1 0.101327423824197 1 0.545142590999603 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480250 chr17:7480255 . . 0 26 hm5C_associated_SNPs_12175 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480254 + 7480234 7480274 41 GTCCTGGGCAAAGGATCAGTCTTTGTACTCTGAGAGCAGAC GTCCTGGGCAAAGGATCAGTCCTTGTACTCTGAGAGCAGAC < 41bp 1 0.0492332819499449 1 0.0726527869701385 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480254 chr17:7480255 . . 0 22 hm5C_associated_SNPs_12176 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480261 + 7480241 7480281 41 GCAAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTGG GCAAAGGATCAGTCCTTGTACTCTGAGAGCAGACTACTTGG < 41bp 1 0.285378979575805 1 0.0774204432964325 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480261 chr17:7480255 . . 0 15 hm5C_associated_SNPs_12177 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480263 + 7480243 7480283 41 AAAGGATCAGTCTTTGTACTCTGAGAGCAGACTACTTGGCT AAAGGATCAGTCCTTGTACTCTGAGAGCAGACTACTTGGCT < 41bp 1 0.369768207208398 1 0.789961338043213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480263 chr17:7480255 . . 0 13 hm5C_associated_SNPs_12178 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7480255 7480255 1 + T C rs75736809 7480270 + 7480250 7480290 41 CAGTCTTTGTACTCTGAGAGCAGACTACTTGGCTCCTCTCT CAGTCCTTGTACTCTGAGAGCAGACTACTTGGCTCCTCTCT < 41bp 1 0.135669092060846 1 0.520616292953491 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480270 chr17:7480255 . . 0 6 hm5C_associated_SNPs_12179 0 0 83 FBL POSTAR2 GSE43666,GSM1067865 chr17:7480100-7480275
64251 chr17 7491331 7491331 1 + C T rs545206972 7491330 + 7491310 7491350 41 CTGGGACTGTCTCCCGGACCCCAGTGCTGGGGTGGGGGAAG CTGGGACTGTCTCCCGGACCCTAGTGCTGGGGTGGGGGAAG < 41bp 1 0.75636866090094 1 0.237820476293564 experiment 0.487262678198119 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MPDU1 ENSG00000129255 UTR3 Human protein_coding chr17:7491330 chr17:7491331 . . 0 22 hm5C_associated_SNPs_12181 1 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7491318-7491396
64251 chr17 7748734 7748734 1 + C T rs57293991 7748744 + 7748724 7748764 41 GGCAGGGGGCCGTGCCCAATCTCCAGGGCTCCTGGGGCCAC GGCAGGGGGCTGTGCCCAATCTCCAGGGCTCCTGGGGCCAC < 41bp 1 0.778863025570263 1 0.970799088478088 experiment 0.442273948859473 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control KDM6B ENSG00000132510 UTR5 Human protein_coding chr17:7748744 chr17:7748734 . . 0 11 hm5C_associated_SNPs_12183 0 0 1 SRSF1 POSTAR2 ENCODE chr17:7748647-7748763
64251 chr17 7750232 7750232 1 + T C rs11078709 7750213 + 7750193 7750233 41 ACCACCACCACCACCACCACCACCCCTGCCTGGCCTGGCTA ACCACCACCACCACCACCACCACCCCTGCCTGGCCTGGCCA < 41bp 1 0.105498686533477 1 0.39609768986702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750213 chr17:7750232 synonymous SNV . 0 40 hm5C_associated_SNPs_12184 0 0 1 DDX24 POSTAR2 ENCODE chr17:7750230-7750285
64251 chr17 7750232 7750232 1 + T C rs11078709 7750235 + 7750215 7750255 41 CCCCTGCCTGGCCTGGCTACCAGCCCCCCATTTCAGCTAAC CCCCTGCCTGGCCTGGCCACCAGCCCCCCATTTCAGCTAAC < 41bp 1 0.13993992360774 1 0.792651772499084 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750235 chr17:7750232 synonymous SNV . 0 18 hm5C_associated_SNPs_12185 0 0 1 DDX24 POSTAR2 ENCODE chr17:7750230-7750285
64251 chr17 7810512 7810512 1 + C G rs139484082 7810504 + 7810484 7810524 41 ACCTCTTGAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGC ACCTCTTGAGAAGGAGGAAGCTGAAAACGAGGAGGAAAAGC < 41bp 1 0.502828976921896 1 0.556456387042999 experiment 0.994342046156208 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810504 chr17:7810512 nonsynonymous SNV 0.910 1 29 hm5C_associated_SNPs_12187 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr17 7810512 7810512 1 + C G rs139484082 7810511 + 7810491 7810531 41 GAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGCCAGAGAA GAGAAGGAGGAAGCTGAAAACGAGGAGGAAAAGCCAGAGAA < 41bp 1 0.787726329018318 1 0.820025682449341 experiment 0.424547341963365 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810511 chr17:7810512 nonsynonymous SNV 0.910 1 22 hm5C_associated_SNPs_12188 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr17 7810512 7810512 1 + C G rs139484082 7810524 + 7810504 7810544 41 CTGAAAACCAGGAGGAAAAGCCAGAGAAGAACAGCAGAATT CTGAAAACGAGGAGGAAAAGCCAGAGAAGAACAGCAGAATT < 41bp 1 0.544301378798104 1 0.645491898059845 experiment 0.911397242403792 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810524 chr17:7810512 nonsynonymous SNV 0.910 1 9 hm5C_associated_SNPs_12189 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr17 7810512 7810512 1 + C G rs139484082 7810525 + 7810505 7810545 41 TGAAAACCAGGAGGAAAAGCCAGAGAAGAACAGCAGAATTG TGAAAACGAGGAGGAAAAGCCAGAGAAGAACAGCAGAATTG < 41bp 1 0.50119370178156 1 0.745246887207031 experiment 0.99761259643688 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810525 chr17:7810512 nonsynonymous SNV 0.910 1 8 hm5C_associated_SNPs_12190 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr17 7838371 7838371 1 + C G rs144838552 7838362 + 7838342 7838382 41 CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC CAGCCCAAGCCCTGGAGGAGCTGTTTCCCGGCTACACCAGC < 41bp 1 0.195829139953032 1 0.10207998752594 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7838362 chr17:7838371 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_12191 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:7838371-7838372
64251 chr17 7838372 7838372 1 + G A rs535452353 7838362 + 7838342 7838382 41 CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCACTACACCAGC < 41bp 1 0.227753852307055 1 0.155037343502045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7838362 chr17:7838372 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_12192 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:7838371-7838372
64251 chr17 8022492 8022492 1 + T C rs118079291 8022474 + 8022454 8022494 41 AGTAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGTAG AGTAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGCAG < 41bp 1 0.563318456304036 1 0.493117392063141 experiment 0.873363087391929 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022474 chr17:8022492 . . 0 39 hm5C_associated_SNPs_12193 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022475 + 8022455 8022495 41 GTAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGTAGA GTAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGCAGA < 41bp 1 0.617139352773898 1 0.412626326084137 experiment 0.765721294452203 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022475 chr17:8022492 . . 0 38 hm5C_associated_SNPs_12194 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022476 + 8022456 8022496 41 TAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGTAGAG TAAAGCTCTCGTGAAGAGCCCGGATAGCTCAGTCGGCAGAG < 41bp 1 0.309670058426061 1 0.354461759328842 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022476 chr17:8022492 . . 0 37 hm5C_associated_SNPs_12195 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022483 + 8022463 8022503 41 CTCGTGAAGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGA CTCGTGAAGAGCCCGGATAGCTCAGTCGGCAGAGCATCAGA < 41bp 1 0.582412600723873 1 0.19660347700119 experiment 0.835174798552254 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022483 chr17:8022492 . . 0 30 hm5C_associated_SNPs_12196 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022485 + 8022465 8022505 41 CGTGAAGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACT CGTGAAGAGCCCGGATAGCTCAGTCGGCAGAGCATCAGACT < 41bp 1 0.352733961667483 1 0.18701308965683 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022485 chr17:8022492 . . 0 28 hm5C_associated_SNPs_12197 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022489 + 8022469 8022509 41 AAGAGCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTA AAGAGCCCGGATAGCTCAGTCGGCAGAGCATCAGACTTTTA < 41bp 1 0.710257916536324 1 0.33440750837326 experiment 0.579484166927352 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022489 chr17:8022492 . . 0 24 hm5C_associated_SNPs_12198 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022497 + 8022477 8022517 41 GGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGG GGATAGCTCAGTCGGCAGAGCATCAGACTTTTAATCTGAGG < 41bp 1 0.332637129079186 1 0.0980454385280609 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022497 chr17:8022492 . . 0 16 hm5C_associated_SNPs_12199 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022500 + 8022480 8022520 41 TAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTC TAGCTCAGTCGGCAGAGCATCAGACTTTTAATCTGAGGGTC < 41bp 1 0.347845077504483 1 0.531358361244202 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022500 chr17:8022492 . . 0 13 hm5C_associated_SNPs_12200 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022504 + 8022484 8022524 41 TCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGG TCAGTCGGCAGAGCATCAGACTTTTAATCTGAGGGTCCAGG < 41bp 1 0.0305489415735633 1 0.00633752346038818 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022504 chr17:8022492 . . 0 9 hm5C_associated_SNPs_12201 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8022492 8022492 1 + T C rs118079291 8022512 + 8022492 8022532 41 TAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT CAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGT < 41bp 1 0.610402956780897 1 0.809027850627899 experiment 0.779194086438205 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ALOXE3 ENSG00000179148 upstream Human protein_coding chr17:8022512 chr17:8022492 . . 0 1 hm5C_associated_SNPs_12202 0 0 22 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:8022465-8022508
64251 chr17 8029081 8029081 1 + G T rs554444064 8029065 + 8029045 8029085 41 CGCAGAATCTTTAAGCCGCGCATTGGTGGTTCAGTGGTAGA CGCAGAATCTTTAAGCCGCGCATTGGTGGTTCAGTGTTAGA < 41bp 1 0.0937118074312928 1 0.0179426670074463 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029065 chr17:8029081 . . 0 37 hm5C_associated_SNPs_12203 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029076 + 8029056 8029096 41 TAAGCCGCGCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG TAAGCCGCGCATTGGTGGTTCAGTGTTAGAATTCTCGCCTG < 41bp 1 0.729511378424715 1 0.461256325244904 experiment 0.540977243150569 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029076 chr17:8029081 . . 0 26 hm5C_associated_SNPs_12204 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029089 + 8029069 8029109 41 GGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGC GGTGGTTCAGTGTTAGAATTCTCGCCTGCCACGCGGGAGGC < 41bp 1 0.699905568138369 1 0.121595978736877 experiment 0.600188863723263 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029089 chr17:8029081 . . 0 13 hm5C_associated_SNPs_12205 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029091 + 8029071 8029111 41 TGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCC TGGTTCAGTGTTAGAATTCTCGCCTGCCACGCGGGAGGCCC < 41bp 1 0.638304763870249 1 0.207177877426147 experiment 0.723390472259501 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029091 chr17:8029081 . . 0 11 hm5C_associated_SNPs_12206 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029093 + 8029073 8029113 41 GTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGG GTTCAGTGTTAGAATTCTCGCCTGCCACGCGGGAGGCCCGG < 41bp 1 0.168396143661256 1 0.290427953004837 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029093 chr17:8029081 . . 0 9 hm5C_associated_SNPs_12207 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029094 + 8029074 8029114 41 TTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGG TTCAGTGTTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGG < 41bp 1 0.258435225678949 1 0.151940196752548 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029094 chr17:8029081 . . 0 8 hm5C_associated_SNPs_12208 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029097 + 8029077 8029117 41 AGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTC AGTGTTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTC < 41bp 1 0.33998123371557 1 0.263351798057556 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029097 chr17:8029081 . . 0 5 hm5C_associated_SNPs_12209 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029081 8029081 1 + G T rs554444064 8029098 + 8029078 8029118 41 GTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCG GTGTTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCG < 41bp 1 0.550288245915902 1 0.444341540336609 experiment 0.899423508168196 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029098 chr17:8029081 . . 0 4 hm5C_associated_SNPs_12210 0 0 32 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029076 + 8029056 8029096 41 TAAGCCGCGCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG TAAGCCGCGCATTGGTGGTTCAGTGGTAGAAATCTCGCCTG < 41bp 1 0.759445257963921 1 0.685646831989288 experiment 0.481109484072157 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029076 chr17:8029087 . . 0 32 hm5C_associated_SNPs_12211 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029089 + 8029069 8029109 41 GGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGC GGTGGTTCAGTGGTAGAAATCTCGCCTGCCACGCGGGAGGC < 41bp 1 0.76578835863948 1 0.257925391197205 experiment 0.468423282721039 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029089 chr17:8029087 . . 0 19 hm5C_associated_SNPs_12212 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029091 + 8029071 8029111 41 TGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCC TGGTTCAGTGGTAGAAATCTCGCCTGCCACGCGGGAGGCCC < 41bp 1 0.665338187690998 1 0.553690373897552 experiment 0.669323624618004 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029091 chr17:8029087 . . 0 17 hm5C_associated_SNPs_12213 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029093 + 8029073 8029113 41 GTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGG GTTCAGTGGTAGAAATCTCGCCTGCCACGCGGGAGGCCCGG < 41bp 1 0.205576215542043 1 0.430070817470551 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029093 chr17:8029087 . . 0 15 hm5C_associated_SNPs_12214 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029094 + 8029074 8029114 41 TTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGG TTCAGTGGTAGAAATCTCGCCTGCCACGCGGGAGGCCCGGG < 41bp 1 0.276602321264817 1 0.117693036794662 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029094 chr17:8029087 . . 0 14 hm5C_associated_SNPs_12215 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029097 + 8029077 8029117 41 AGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTC AGTGGTAGAAATCTCGCCTGCCACGCGGGAGGCCCGGGTTC < 41bp 1 0.412692732478205 1 0.413004696369171 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029097 chr17:8029087 . . 0 11 hm5C_associated_SNPs_12216 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8029087 8029087 1 + T A rs377519668 8029098 + 8029078 8029118 41 GTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCG GTGGTAGAAATCTCGCCTGCCACGCGGGAGGCCCGGGTTCG < 41bp 1 0.518109522024521 1 0.527121126651764 experiment 0.963780955950959 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target HES7;PER1 ENSG00000179111;ENSG00000179094 intergenic Human other chr17:8029098 chr17:8029087 . . 0 10 hm5C_associated_SNPs_12217 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8029040-8029100
64251 chr17 8090294 8090294 1 + A G rs76800617 8090278 + 8090258 8090298 41 CCTCGTCGGCTAAGGAAGTCCTGTGCTCAGTTTTGTAGCAT CCTCGTCGGCTAAGGAAGTCCTGTGCTCAGTTTTGTGGCAT < 41bp 1 0.671142593758594 1 0.173854291439056 experiment 0.657714812482811 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 upstream Human other chr17:8090278 chr17:8090294 . . 0 37 hm5C_associated_SNPs_12218 0 0 18 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:8090220-8090300
64251 chr17 8090294 8090294 1 + A G rs76800617 8090285 + 8090265 8090305 41 GGCTAAGGAAGTCCTGTGCTCAGTTTTGTAGCATCAAAACT GGCTAAGGAAGTCCTGTGCTCAGTTTTGTGGCATCAAAACT < 41bp 1 0.625603948231707 1 0.117573857307434 experiment 0.748792103536587 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 upstream Human other chr17:8090285 chr17:8090294 . . 0 30 hm5C_associated_SNPs_12219 0 0 18 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:8090220-8090300
64251 chr17 8090563 8090563 1 + C T rs192993858 8090544 + 8090524 8090564 41 ATCCTGGGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCCC ATCCTGGGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCTC < 41bp 1 0.501187741141024 1 0.898456215858459 experiment 0.997624517717952 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 ncRNA_exonic Human other chr17:8090544 chr17:8090563 . . 0 40 hm5C_associated_SNPs_12220 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr17:8090518-8090573
64251 chr17 8090563 8090563 1 + C T rs192993858 8090549 + 8090529 8090569 41 GGGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCCCACGCT GGGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCTCACGCT < 41bp 1 0.0361757562140535 1 0.0446156859397888 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 ncRNA_exonic Human other chr17:8090549 chr17:8090563 . . 0 35 hm5C_associated_SNPs_12221 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr17:8090518-8090573
64251 chr17 8090563 8090563 1 + C T rs192993858 8090550 + 8090530 8090570 41 GGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCCCACGCTT GGTTCGAATCCCAGCGGTGCCTCCGTGTTTCCCTCACGCTT < 41bp 1 0.69414957200069 1 0.745054125785828 experiment 0.611700855998619 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 ncRNA_exonic Human other chr17:8090550 chr17:8090563 . . 0 34 hm5C_associated_SNPs_12222 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr17:8090518-8090573
64251 chr17 8090563 8090563 1 + C T rs192993858 8090553 + 8090533 8090573 41 TCGAATCCCAGCGGTGCCTCCGTGTTTCCCCCACGCTTTTG TCGAATCCCAGCGGTGCCTCCGTGTTTCCCTCACGCTTTTG < 41bp 1 0.470518291223317 1 0.322146773338318 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target MIR4521 ENSG00000266638 ncRNA_exonic Human other chr17:8090553 chr17:8090563 . . 0 31 hm5C_associated_SNPs_12223 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr17:8090518-8090573
64251 chr17 8090943 8090943 1 + C T rs187152371 8090923 + 8090903 8090943 41 TAGCAACTGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGC TAGCAACTGGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGT < 41bp 1 0.316300561723497 1 0.343464970588684 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090923 chr17:8090943 . . 0 41 hm5C_associated_SNPs_12224 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8090943 8090943 1 + C T rs187152371 8090936 + 8090916 8090956 41 GTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAG GTTAGCTCAGTTGGTTAGAGCGTGGTGTTAATAACGCCAAG < 41bp 1 0.658998348474505 1 0.467208921909332 experiment 0.682003303050989 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090936 chr17:8090943 . . 0 28 hm5C_associated_SNPs_12225 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8090943 8090943 1 + C T rs187152371 8090952 + 8090932 8090972 41 AGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCC AGAGCGTGGTGTTAATAACGCCAAGGTCGCGGGTTCGATCC < 41bp 1 0.481536823954375 1 0.378381162881851 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090952 chr17:8090943 . . 0 12 hm5C_associated_SNPs_12226 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8090943 8090943 1 + C T rs187152371 8090953 + 8090933 8090973 41 GAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCC GAGCGTGGTGTTAATAACGCCAAGGTCGCGGGTTCGATCCC < 41bp 1 0.632588320454366 1 0.500774919986725 experiment 0.734823359091268 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090953 chr17:8090943 . . 0 11 hm5C_associated_SNPs_12227 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8090943 8090943 1 + C T rs187152371 8090961 + 8090941 8090981 41 TGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG TGTTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG < 41bp 1 0.711756470634175 1 0.762492299079895 experiment 0.576487058731649 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090961 chr17:8090943 . . 0 3 hm5C_associated_SNPs_12228 0 0 5 FBL POSTAR2 GSE43666,GSM1067865 chr17:8090905-8090943
64251 chr17 8090976 8090976 1 + T A rs77463748 8090961 + 8090941 8090981 41 TGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGG TGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGAACGGG < 41bp 1 0.679221874974308 1 0.708017408847809 experiment 0.641556250051385 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090961 chr17:8090976 . . 0 36 hm5C_associated_SNPs_12229 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090967 + 8090947 8090987 41 TAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCAGGA TAACGCCAAGGTCGCGGGTTCGATCCCCGAACGGGCCAGGA < 41bp 1 0.1255966212422 1 0.233038187026978 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090967 chr17:8090976 . . 0 30 hm5C_associated_SNPs_12230 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090971 + 8090951 8090991 41 GCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCAGGATTGA GCCAAGGTCGCGGGTTCGATCCCCGAACGGGCCAGGATTGA < 41bp 1 0.466711094199742 1 0.138575345277786 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090971 chr17:8090976 . . 0 26 hm5C_associated_SNPs_12231 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090972 + 8090952 8090992 41 CCAAGGTCGCGGGTTCGATCCCCGTACGGGCCAGGATTGAA CCAAGGTCGCGGGTTCGATCCCCGAACGGGCCAGGATTGAA < 41bp 1 0.640907825176203 1 0.524924278259277 experiment 0.718184349647594 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090972 chr17:8090976 . . 0 25 hm5C_associated_SNPs_12232 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090973 + 8090953 8090993 41 CAAGGTCGCGGGTTCGATCCCCGTACGGGCCAGGATTGAAA CAAGGTCGCGGGTTCGATCCCCGAACGGGCCAGGATTGAAA < 41bp 1 0.468907091372902 1 0.444720089435577 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090973 chr17:8090976 . . 0 24 hm5C_associated_SNPs_12233 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090974 + 8090954 8090994 41 AAGGTCGCGGGTTCGATCCCCGTACGGGCCAGGATTGAAAC AAGGTCGCGGGTTCGATCCCCGAACGGGCCAGGATTGAAAC < 41bp 1 0.247750271435965 1 0.65772408246994 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090974 chr17:8090976 . . 0 23 hm5C_associated_SNPs_12234 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090978 + 8090958 8090998 41 TCGCGGGTTCGATCCCCGTACGGGCCAGGATTGAAACTTTT TCGCGGGTTCGATCCCCGAACGGGCCAGGATTGAAACTTTT < 41bp 1 0.4172699772629 1 0.435904026031494 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090978 chr17:8090976 . . 0 19 hm5C_associated_SNPs_12235 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8090976 8090976 1 + T A rs77463748 8090982 + 8090962 8091002 41 GGGTTCGATCCCCGTACGGGCCAGGATTGAAACTTTTCGAA GGGTTCGATCCCCGAACGGGCCAGGATTGAAACTTTTCGAA < 41bp 1 0.385552701425998 1 0.120173543691635 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control BORCS6;MIR4521 ENSG00000196544;ENSG00000266638 downstream Human other chr17:8090982 chr17:8090976 . . 0 15 hm5C_associated_SNPs_12236 0 0 48 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:8090940-8090980
64251 chr17 8124887 8124887 1 + G A rs58263745 8124867 + 8124847 8124887 41 AAAGAGAGCTAGCACCGGAGCGTTGGTGGTATAGTGGTAAG AAAGAGAGCTAGCACCGGAGCGTTGGTGGTATAGTGGTAAA < 41bp 1 0.288687992449507 1 0.364035248756409 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124867 chr17:8124887 . . 0 41 hm5C_associated_SNPs_12237 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124888 + 8124868 8124908 41 GTTGGTGGTATAGTGGTAAGCATAGCTGCCTTCCAAGCAGT GTTGGTGGTATAGTGGTAAACATAGCTGCCTTCCAAGCAGT < 41bp 1 0.416209145881056 1 0.406551241874695 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124888 chr17:8124887 . . 0 20 hm5C_associated_SNPs_12238 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124893 + 8124873 8124913 41 TGGTATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACC TGGTATAGTGGTAAACATAGCTGCCTTCCAAGCAGTTGACC < 41bp 1 0.373971424970498 1 0.142968118190765 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124893 chr17:8124887 . . 0 15 hm5C_associated_SNPs_12239 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124896 + 8124876 8124916 41 TATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGG TATAGTGGTAAACATAGCTGCCTTCCAAGCAGTTGACCCGG < 41bp 1 0.0139681952453715 1 0.159186542034149 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124896 chr17:8124887 . . 0 12 hm5C_associated_SNPs_12240 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124897 + 8124877 8124917 41 ATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGG ATAGTGGTAAACATAGCTGCCTTCCAAGCAGTTGACCCGGG < 41bp 1 0.0939956777861374 1 0.0804309546947479 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124897 chr17:8124887 . . 0 11 hm5C_associated_SNPs_12241 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124900 + 8124880 8124920 41 GTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTC GTGGTAAACATAGCTGCCTTCCAAGCAGTTGACCCGGGTTC < 41bp 1 0.274768243511161 1 0.768259406089783 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124900 chr17:8124887 . . 0 8 hm5C_associated_SNPs_12242 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124901 + 8124881 8124921 41 TGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCG TGGTAAACATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCG < 41bp 1 0.50590932921937 1 0.500464022159576 experiment 0.98818134156126 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124901 chr17:8124887 . . 0 7 hm5C_associated_SNPs_12243 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124887 8124887 1 + G A rs58263745 8124905 + 8124885 8124925 41 AAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC AAACATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC < 41bp 1 0.490804233491105 1 0.726215422153473 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124905 chr17:8124887 . . 0 3 hm5C_associated_SNPs_12244 0 0 86 SSB POSTAR2 GSE95683,GSM2521599 chr17:8124840-8124900
64251 chr17 8124912 8124912 1 + C A rs182964059 8124893 + 8124873 8124913 41 TGGTATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACC TGGTATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGAAC < 41bp 1 0.389788828847547 1 0.319129884243011 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124893 chr17:8124912 . . 0 40 hm5C_associated_SNPs_12245 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124896 + 8124876 8124916 41 TATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGG TATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGAACCGG < 41bp 1 0.0167107942642258 1 0.162148088216782 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124896 chr17:8124912 . . 0 37 hm5C_associated_SNPs_12246 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124897 + 8124877 8124917 41 ATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGG ATAGTGGTAAGCATAGCTGCCTTCCAAGCAGTTGAACCGGG < 41bp 1 0.0816222364823573 1 0.10651022195816 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124897 chr17:8124912 . . 0 36 hm5C_associated_SNPs_12247 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124900 + 8124880 8124920 41 GTGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTC GTGGTAAGCATAGCTGCCTTCCAAGCAGTTGAACCGGGTTC < 41bp 1 0.294285193410287 1 0.731294453144073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124900 chr17:8124912 . . 0 33 hm5C_associated_SNPs_12248 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124901 + 8124881 8124921 41 TGGTAAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCG TGGTAAGCATAGCTGCCTTCCAAGCAGTTGAACCGGGTTCG < 41bp 1 0.472621546614068 1 0.422075390815735 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124901 chr17:8124912 . . 0 32 hm5C_associated_SNPs_12249 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124905 + 8124885 8124925 41 AAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC AAGCATAGCTGCCTTCCAAGCAGTTGAACCGGGTTCGATTC < 41bp 1 0.492916693224046 1 0.721691191196442 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124905 chr17:8124912 . . 0 28 hm5C_associated_SNPs_12250 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124913 + 8124893 8124933 41 CTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAA CTGCCTTCCAAGCAGTTGAACCGGGTTCGATTCCCGGCCAA < 41bp 1 0.717158443187966 1 0.533957302570343 experiment 0.565683113624069 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124913 chr17:8124912 . . 0 20 hm5C_associated_SNPs_12251 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124914 + 8124894 8124934 41 TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC TGCCTTCCAAGCAGTTGAACCGGGTTCGATTCCCGGCCAAC < 41bp 1 0.631601656099434 1 0.76994252204895 experiment 0.736796687801131 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124914 chr17:8124912 . . 0 19 hm5C_associated_SNPs_12252 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124920 + 8124900 8124940 41 CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGT CCAAGCAGTTGAACCGGGTTCGATTCCCGGCCAACGCAAGT < 41bp 1 0.168574034037303 1 0.127021014690399 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124920 chr17:8124912 . . 0 13 hm5C_associated_SNPs_12253 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124925 + 8124905 8124945 41 CAGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGTCGTTT CAGTTGAACCGGGTTCGATTCCCGGCCAACGCAAGTCGTTT < 41bp 1 0.457383964661515 1 0.456393539905548 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124925 chr17:8124912 . . 0 8 hm5C_associated_SNPs_12254 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124926 + 8124906 8124946 41 AGTTGACCCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTT AGTTGAACCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTT < 41bp 1 0.522128995034749 1 0.781047701835632 experiment 0.955742009930502 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124926 chr17:8124912 . . 0 7 hm5C_associated_SNPs_12255 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124927 + 8124907 8124947 41 GTTGACCCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTG GTTGAACCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTG < 41bp 1 0.642367853407478 1 0.374601781368256 experiment 0.715264293185044 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124927 chr17:8124912 . . 0 6 hm5C_associated_SNPs_12256 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124930 + 8124910 8124950 41 GACCCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTGGGT GAACCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTGGGT < 41bp 1 0.0325785022561331 1 0.230476051568985 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124930 chr17:8124912 . . 0 3 hm5C_associated_SNPs_12257 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8124912 8124912 1 + C A rs182964059 8124931 + 8124911 8124951 41 ACCCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTGGGTG AACCGGGTTCGATTCCCGGCCAACGCAAGTCGTTTTGGGTG < 41bp 1 0.397780859733113 1 0.193944215774536 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target LINC00324 ENSG00000178977 ncRNA_intronic Human lincRNA chr17:8124931 chr17:8124912 . . 0 2 hm5C_associated_SNPs_12258 0 0 35 SSB POSTAR2 GSE95683,GSM2521600 chr17:8124840-8124940
64251 chr17 8172052 8172052 1 + G A rs372608754 8172060 + 8172040 8172080 41 GCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCT GCCTTCTGCTACACCACAACCTGTCTGGGCGCTACGAGTCT < 41bp 1 0.227314847597372 1 0.053743302822113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172060 chr17:8172052 nonsynonymous SNV 0.040 0 13 hm5C_associated_SNPs_12259 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:8172041-8172062
64251 chr17 8172070 8172070 1 + G A rs539244059 8172060 + 8172040 8172080 41 GCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCT GCCTTCTGCTACGCCACAACCTGTCTGGGCACTACGAGTCT < 41bp 1 0.325149981922601 1 0.0910758972167969 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172060 chr17:8172070 nonsynonymous SNV 0.146 4 31 hm5C_associated_SNPs_12260 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8172060-8172080
64251 chr17 14110901 14110901 1 + A G rs11078234 14110919 + 14110899 14110939 41 GCAGAGTGGCACTTGGTGGCCAGAAAGTGTGAGCCTCATGA GCGGAGTGGCACTTGGTGGCCAGAAAGTGTGAGCCTCATGA < 41bp 1 0.76448999150835 1 0.645110726356506 experiment 0.471020016983301 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14110919 chr17:14110901 . . 0 3 hm5C_associated_SNPs_12263 2 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:14110881-14110902
64251 chr17 14111854 14111854 1 + C T rs75636595 14111865 + 14111845 14111885 41 AAATCTTCCCTCTTGGCTGCCCCCAGGTATTTACTGTGGAG AAATCTTCCTTCTTGGCTGCCCCCAGGTATTTACTGTGGAG < 41bp 1 0.366994488593097 1 0.338195770978928 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14111865 chr17:14111854 . . 0 10 hm5C_associated_SNPs_12264 2 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:14111820-14111858
64251 chr17 14111876 14111876 1 + T C rs143735639 14111865 + 14111845 14111885 41 AAATCTTCCCTCTTGGCTGCCCCCAGGTATTTACTGTGGAG AAATCTTCCCTCTTGGCTGCCCCCAGGTATTCACTGTGGAG < 41bp 1 0.333764887677274 1 0.317159056663513 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient COX10 ENSG00000006695 UTR3 Human protein_coding chr17:14111865 chr17:14111876 . . 0 32 hm5C_associated_SNPs_12265 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:14111851-14111892
64251 chr17 14205082 14205082 1 + G A rs62636623 14205071 + 14205051 14205091 41 CGACCCGCCAGCCCTGGCCACAGCTCCGGACGGGACGCCCC CGACCCGCCAGCCCTGGCCACAGCTCCGGACAGGACGCCCC < 41bp 1 0.575996906116702 1 0.160254597663879 experiment 0.848006187766596 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14205071 chr17:14205082 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_12266 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:14205071-14205104
64251 chr17 15878796 15878796 1 + G A rs185682716 15878776 + 15878756 15878796 41 AATGGACTGCCTCTCTTGAGCACTTCCCTGGAGCTACCACG AATGGACTGCCTCTCTTGAGCACTTCCCTGGAGCTACCACA < 41bp 1 0.168186464753438 1 0.026873379945755 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADORA2B ENSG00000170425 UTR3 Human protein_coding chr17:15878776 chr17:15878796 . . 0 41 hm5C_associated_SNPs_12268 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:15878756-15878796
64251 chr17 15907568 15907568 1 + G A rs58517927 15907552 + 15907532 15907572 41 TGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGCAGA TGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCACAGA < 41bp 1 0.123747155104089 1 0.0638697445392609 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15907552 chr17:15907568 synonymous SNV . 0 37 hm5C_associated_SNPs_12269 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:15907526-15907572
64251 chr17 15929920 15929920 1 + A C rs143293913 15929902 + 15929882 15929922 41 CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCCTATATT CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCCTATCTT < 41bp 1 0.217238720764789 1 0.0309081375598907 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929902 chr17:15929920 nonsynonymous SNV 0.985 1 39 hm5C_associated_SNPs_12270 0 0 15 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:15929900-15929920
64251 chr17 15931545 15931545 1 + T A rs11554356 15931565 + 15931545 15931585 41 TGAACACTCTACTTCCTTTGCAGCCTTAGTCACACAACTGA AGAACACTCTACTTCCTTTGCAGCCTTAGTCACACAACTGA < 41bp 1 0.507328762548138 1 0.0884763896465302 experiment 0.985342474903724 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TTC19 ENSG00000011295 UTR3 Human protein_coding chr17:15931565 chr17:15931545 . . 0 1 hm5C_associated_SNPs_12271 1 0 22 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:15931433-15931580
64251 chr17 15931582 15931582 1 + C G rs143866104 15931565 + 15931545 15931585 41 TGAACACTCTACTTCCTTTGCAGCCTTAGTCACACAACTGA TGAACACTCTACTTCCTTTGCAGCCTTAGTCACACAAGTGA < 41bp 1 0.465918700099296 1 0.109746515750885 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TTC19 ENSG00000011295 UTR3 Human protein_coding chr17:15931565 chr17:15931582 . . 0 38 hm5C_associated_SNPs_12272 1 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:15931513-15931646
64251 chr17 16285404 16285404 1 + C T rs9908960 16285385 + 16285365 16285405 41 GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATTC < 41bp 1 0.274178147879654 1 0.121844112873077 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285385 chr17:16285404 synonymous SNV . 0 40 hm5C_associated_SNPs_12273 0 0 3 SND1 POSTAR2 ENCODE chr17:16285363-16285404
64251 chr17 16342718 16342718 1 + G A rs61998213 16342711 + 16342691 16342731 41 CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTA CGGCCCACAGTGGGGGTGTGCAAACCCAAGAGAACTGGGTA < 41bp 1 0.366851249299017 1 0.250647574663162 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342711 chr17:16342718 . . 0 28 hm5C_associated_SNPs_12275 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:16342638-16342722
64251 chr17 16342718 16342718 1 + G A rs61998213 16342716 + 16342696 16342736 41 CACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTAAGTTG CACAGTGGGGGTGTGCAAACCCAAGAGAACTGGGTAAGTTG < 41bp 1 0.49336985574485 1 0.333793818950653 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342716 chr17:16342718 . . 0 23 hm5C_associated_SNPs_12276 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:16342638-16342722
64251 chr17 16342833 16342833 1 + T C rs11871958 16342848 + 16342828 16342868 41 GATACTTGTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC GATACCTGTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC < 41bp 1 0.0268034760143616 1 0.287608861923218 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49B ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342848 chr17:16342833 . . 0 6 hm5C_associated_SNPs_12277 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16342890 16342890 1 + C A rs374801799 16342874 + 16342854 16342894 41 GAAGCGATAACTGACGACGTCTAATGTCTATCTGACCGCAG GAAGCGATAACTGACGACGTCTAATGTCTATCTGACAGCAG < 41bp 1 0.20986520351612 1 0.0940206944942474 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342874 chr17:16342890 . . 0 37 hm5C_associated_SNPs_12278 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16342890 16342890 1 + C A rs374801799 16342881 + 16342861 16342901 41 TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTGA TAACTGACGACGTCTAATGTCTATCTGACAGCAGTCGCTGA < 41bp 1 0.12124582143659 1 0.0559397637844086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342881 chr17:16342890 . . 0 30 hm5C_associated_SNPs_12279 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16344600 16344600 1 + T C rs4617905 16344596 + 16344576 16344616 41 GCAGATTGTGTAGTGGTGAACCTATGGTTTTCTGAAGATAT GCAGATTGTGTAGTGGTGAACCTACGGTTTTCTGAAGATAT < 41bp 1 0.0363548951392248 1 0.111973434686661 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD65 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344596 chr17:16344600 . . 0 25 hm5C_associated_SNPs_12280 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16344583-16344612
64251 chr17 16344601 16344601 1 + G A rs4622550 16344596 + 16344576 16344616 41 GCAGATTGTGTAGTGGTGAACCTATGGTTTTCTGAAGATAT GCAGATTGTGTAGTGGTGAACCTATAGTTTTCTGAAGATAT < 41bp 1 0.0414605078425472 1 0.168481111526489 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD65 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344596 chr17:16344601 . . 0 26 hm5C_associated_SNPs_12281 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16344583-16344612
64251 chr17 17070813 17070813 1 + C T rs138734388 17070801 + 17070781 17070821 41 TGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGG TGACCAGGACCGAGAGCACACTGCAGGCTGAGTGCAGCCGG < 41bp 1 0.774921048161413 1 0.496306747198105 experiment 0.450157903677173 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17070801 chr17:17070813 unknown . 0 33 hm5C_associated_SNPs_12283 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:17070801-17070839
64251 chr17 17080665 17080665 1 + C A rs200762157 17080663 + 17080643 17080683 41 TCAGCAGGTTGAAGGAGCAGCTCAAGGCTGCAACGGAAGCA TCAGCAGGTTGAAGGAGCAGCTAAAGGCTGCAACGGAAGCA < 41bp 1 0.371074407357981 1 0.228254050016403 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17080663 chr17:17080665 synonymous SNV . 0 23 hm5C_associated_SNPs_12284 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:17080660-17080681
64251 chr17 17080665 17080665 1 + C A rs200762157 17080670 + 17080650 17080690 41 GTTGAAGGAGCAGCTCAAGGCTGCAACGGAAGCACTGGGGG GTTGAAGGAGCAGCTAAAGGCTGCAACGGAAGCACTGGGGG < 41bp 1 0.754618754727968 1 0.789975643157959 experiment 0.490762490544065 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17080670 chr17:17080665 synonymous SNV . 0 16 hm5C_associated_SNPs_12285 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:17080660-17080681
64251 chr17 17080665 17080665 1 + C A rs200762157 17080673 + 17080653 17080693 41 GAAGGAGCAGCTCAAGGCTGCAACGGAAGCACTGGGGGAGA GAAGGAGCAGCTAAAGGCTGCAACGGAAGCACTGGGGGAGA < 41bp 1 0.254706413608349 1 0.250723600387573 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17080673 chr17:17080665 synonymous SNV . 0 13 hm5C_associated_SNPs_12286 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:17080660-17080681
64251 chr17 17697541 17697541 1 + C T rs34898721 17697528 + 17697508 17697548 41 CCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCGGA CCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGTTGTCGGA < 41bp 1 0.123891527932277 1 0.0593386590480804 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697528 chr17:17697541 synonymous SNV . 0 34 hm5C_associated_SNPs_12287 1 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697534-17697554
64251 chr17 17968940 17968940 1 + G A rs187613009 17968938 + 17968918 17968958 41 AGCCTTGGTGCTCAGTGGTCCCGAGGCCCTAGACCCCCACC AGCCTTGGTGCTCAGTGGTCCCAAGGCCCTAGACCCCCACC < 41bp 1 0.374292383411521 1 0.428774178028107 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17968938 chr17:17968940 . . 0 23 hm5C_associated_SNPs_12288 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr17:17968909-17968967
64251 chr17 17991269 17991269 1 + C T rs561745926 17991272 + 17991252 17991292 41 GGCGCACGCTACTCTGTCGCCGCCGTCAGACCGGAATTGCC GGCGCACGCTACTCTGTTGCCGCCGTCAGACCGGAATTGCC < 41bp 1 0.703609457826642 1 0.581407189369202 experiment 0.592781084346716 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DRG2 ENSG00000108591 UTR5 Human protein_coding chr17:17991272 chr17:17991269 . . 0 18 hm5C_associated_SNPs_12289 0 0 2 DDX3X POSTAR2 ENCODE chr17:17991245-17991394
64251 chr17 17991269 17991269 1 + C T rs561745926 17991278 + 17991258 17991298 41 CGCTACTCTGTCGCCGCCGTCAGACCGGAATTGCCGGTGCC CGCTACTCTGTTGCCGCCGTCAGACCGGAATTGCCGGTGCC < 41bp 1 0.331255551064467 1 0.774197936058044 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DRG2 ENSG00000108591 UTR5 Human protein_coding chr17:17991278 chr17:17991269 . . 0 12 hm5C_associated_SNPs_12290 0 0 2 DDX3X POSTAR2 ENCODE chr17:17991245-17991394
64251 chr17 17991294 17991294 1 + G T rs142012845 17991278 + 17991258 17991298 41 CGCTACTCTGTCGCCGCCGTCAGACCGGAATTGCCGGTGCC CGCTACTCTGTCGCCGCCGTCAGACCGGAATTGCCGTTGCC < 41bp 1 0.351655708729346 1 0.760145783424377 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DRG2 ENSG00000108591 UTR5 Human protein_coding chr17:17991278 chr17:17991294 . . 0 37 hm5C_associated_SNPs_12291 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:17991278-17991323
64251 chr17 18087299 18087299 1 + C A rs1064629 18087312 + 18087292 18087332 41 GCGCTGCCGGCGCCCCTGCCCCGCGGGACGTGGAGAAGGTG GCGCTGCAGGCGCCCCTGCCCCGCGGGACGTGGAGAAGGTG < 41bp 1 0.630199985770914 1 0.604721426963806 experiment 0.739600028458171 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ALKBH5 ENSG00000266677 ncRNA_intronic Human antisense chr17:18087312 chr17:18087299 . . 0 8 hm5C_associated_SNPs_12295 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18087297-18087318
64251 chr17 18147834 18147834 1 + G A rs191476014 18147842 + 18147822 18147862 41 GCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAA GCTGGGATTACAAGCGTGAGCCACCATGCCCAGCCCTGCAA < 41bp 1 0.383196672490415 1 0.0496510863304138 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147842 chr17:18147834 . . 0 13 hm5C_associated_SNPs_12296 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18147834 18147834 1 + G A rs191476014 18147843 + 18147823 18147863 41 CTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAAA CTGGGATTACAAGCGTGAGCCACCATGCCCAGCCCTGCAAA < 41bp 1 0.78906140070525 1 0.920207500457764 experiment 0.4218771985895 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147843 chr17:18147834 . . 0 12 hm5C_associated_SNPs_12297 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18147837 18147837 1 + G A rs182463990 18147842 + 18147822 18147862 41 GCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAA GCTGGGATTACAGGCATGAGCCACCATGCCCAGCCCTGCAA < 41bp 1 0.425783112535652 1 0.0583764016628265 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147842 chr17:18147837 . . 0 16 hm5C_associated_SNPs_12298 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18147841 18147841 1 + G A rs571646111 18147842 + 18147822 18147862 41 GCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAA GCTGGGATTACAGGCGTGAACCACCATGCCCAGCCCTGCAA < 41bp 1 0.468175820767481 1 0.0999099910259247 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147842 chr17:18147841 . . 0 20 hm5C_associated_SNPs_12299 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18147846 18147846 1 + C T rs187988401 18147842 + 18147822 18147862 41 GCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAA GCTGGGATTACAGGCGTGAGCCACTATGCCCAGCCCTGCAA < 41bp 1 0.523076420415861 1 0.0740965902805328 experiment 0.953847159168278 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147842 chr17:18147846 . . 0 25 hm5C_associated_SNPs_12300 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18147846 18147846 1 + C T rs187988401 18147843 + 18147823 18147863 41 CTGGGATTACAGGCGTGAGCCACCATGCCCAGCCCTGCAAA CTGGGATTACAGGCGTGAGCCACTATGCCCAGCCCTGCAAA < 41bp 1 0.653869857725951 1 0.794956207275391 experiment 0.692260284548098 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL1 ENSG00000131899 UTR3 Human protein_coding chr17:18147843 chr17:18147846 . . 0 24 hm5C_associated_SNPs_12301 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18147832-18147866
64251 chr17 18167941 18167941 1 + G A rs149229358 18167953 + 18167933 18167973 41 TGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TGCTCATCAGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC < 41bp 1 0.570157266491542 1 0.918501615524292 experiment 0.859685467016916 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167953 chr17:18167941 nonsynonymous SNV 0.223 0 9 hm5C_associated_SNPs_12303 0 0 2 RBM15 POSTAR2 ENCODE chr17:18167917-18167948
64251 chr17 18220880 18220880 1 + G T rs73291850 18220876 + 18220856 18220896 41 TGCTGTATTGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCC TGCTGTATTGGGAAGGAGAGCGATTGTCAGTTGGTGCTGCC < 41bp 1 0.181360547416899 1 0.437739759683609 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18220876 chr17:18220880 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_12304 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18220860-18220880
64251 chr17 18761508 18761508 1 + G A rs11548434 18761501 + 18761481 18761521 41 CCATTTTGCTCCTAGAGAGGCCGCCAGGAGACCCGGCGCTT CCATTTTGCTCCTAGAGAGGCCGCCAGAAGACCCGGCGCTT < 41bp 1 0.218319795269487 1 0.234347432851791 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761501 chr17:18761508 . . 0 28 hm5C_associated_SNPs_12307 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761502 + 18761482 18761522 41 CATTTTGCTCCTAGAGAGGCCGCCAGGAGACCCGGCGCTTT CATTTTGCTCCTAGAGAGGCCGCCAGAAGACCCGGCGCTTT < 41bp 1 0.769887267134016 1 0.393545806407928 experiment 0.460225465731968 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761502 chr17:18761508 . . 0 27 hm5C_associated_SNPs_12308 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761504 + 18761484 18761524 41 TTTTGCTCCTAGAGAGGCCGCCAGGAGACCCGGCGCTTTCT TTTTGCTCCTAGAGAGGCCGCCAGAAGACCCGGCGCTTTCT < 41bp 1 0.641829314241581 1 0.203890055418015 experiment 0.716341371516837 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761504 chr17:18761508 . . 0 25 hm5C_associated_SNPs_12309 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761505 + 18761485 18761525 41 TTTGCTCCTAGAGAGGCCGCCAGGAGACCCGGCGCTTTCTT TTTGCTCCTAGAGAGGCCGCCAGAAGACCCGGCGCTTTCTT < 41bp 1 0.71928277221314 1 0.784489095211029 experiment 0.561434455573721 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761505 chr17:18761508 . . 0 24 hm5C_associated_SNPs_12310 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761512 + 18761492 18761532 41 CTAGAGAGGCCGCCAGGAGACCCGGCGCTTTCTTCCTTCTG CTAGAGAGGCCGCCAGAAGACCCGGCGCTTTCTTCCTTCTG < 41bp 1 0.69769799586675 1 0.308438122272491 experiment 0.604604008266501 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761512 chr17:18761508 . . 0 17 hm5C_associated_SNPs_12311 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761513 + 18761493 18761533 41 TAGAGAGGCCGCCAGGAGACCCGGCGCTTTCTTCCTTCTGC TAGAGAGGCCGCCAGAAGACCCGGCGCTTTCTTCCTTCTGC < 41bp 1 0.552374761644584 1 0.332151114940643 experiment 0.895250476710833 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761513 chr17:18761508 . . 0 16 hm5C_associated_SNPs_12312 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18761508 18761508 1 + G A rs11548434 18761517 + 18761497 18761537 41 GAGGCCGCCAGGAGACCCGGCGCTTTCTTCCTTCTGCAGCT GAGGCCGCCAGAAGACCCGGCGCTTTCTTCCTTCTGCAGCT < 41bp 1 0.177895214116314 1 0.21112659573555 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18761517 chr17:18761508 . . 0 12 hm5C_associated_SNPs_12313 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18761500-18761520
64251 chr17 18768870 18768870 1 + C T rs2305061 18768865 + 18768845 18768885 41 TAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTGTAAGTTT TAAAACATTGAGCTCTTCAGCTCCGTCTTTCTTGTAAGTTT < 41bp 1 0.448430042331417 1 0.393387138843536 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRPSAP2 ENSG00000141127 UTR5 Human protein_coding chr17:18768865 chr17:18768870 . . 0 26 hm5C_associated_SNPs_12314 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18768835-18768873
64251 chr17 19239702 19239702 1 + T A rs111954981 19239712 + 19239692 19239732 41 GTGATTCTTTTGTAACGAGTCTTTCATGATGTGACTTTGAG GTGATTCTTTAGTAACGAGTCTTTCATGATGTGACTTTGAG < 41bp 1 0.0691489017679214 1 0.0431336462497711 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control B9D1;EPN2 ENSG00000072134 UTR3 Human protein_coding chr17:19239712 chr17:19239702 . . 0 11 hm5C_associated_SNPs_12315 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:19239628-19239745
64251 chr17 20163529 20163529 1 + A G rs2703791 20163528 + 20163508 20163548 41 GGAAAGAAAAGACCCTCTGGCAGCCTTGGCCCGGGAATACG GGAAAGAAAAGACCCTCTGGCGGCCTTGGCCCGGGAATACG < 41bp 1 0.309118619577322 1 0.362438768148422 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20163528 chr17:20163529 synonymous SNV . 0 22 hm5C_associated_SNPs_12316 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20163518-20163539
64251 chr17 20217460 20217460 1 + C T rs191585744 20217462 + 20217442 20217482 41 TACTGTCCACTGACCCTGCTCTGCCCACCACCCAGCTGCCT TACTGTCCACTGACCCTGTTCTGCCCACCACCCAGCTGCCT < 41bp 1 0.0913966211896644 1 0.10713604092598 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPECC1 ENSG00000263494 ncRNA_intronic Human lincRNA chr17:20217462 chr17:20217460 . . 0 19 hm5C_associated_SNPs_12317 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:20217430-20217525
64251 chr17 21188081 21188081 1 + C A rs535063710 21188077 + 21188057 21188097 41 CCTTGCTGCAGTCGCCGCCGCAGTCCTCGCCGCAGTCGCCG CCTTGCTGCAGTCGCCGCCGCAGTACTCGCCGCAGTCGCCG < 41bp 1 0.656338463636219 1 0.273335754871368 experiment 0.687323072727561 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188077 chr17:21188081 . . 0 25 hm5C_associated_SNPs_12320 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188081 21188081 1 + C A rs535063710 21188101 + 21188081 21188121 41 CCTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTG ACTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTG < 41bp 1 0.425702521740333 1 0.434178948402405 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188101 chr17:21188081 . . 0 1 hm5C_associated_SNPs_12321 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188101 + 21188081 21188121 41 CCTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTG CCTCGCCGCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTG < 41bp 1 0.388161682515237 1 0.167171865701675 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188101 chr17:21188099 . . 0 19 hm5C_associated_SNPs_12322 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188102 + 21188082 21188122 41 CTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGC CTCGCCGCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGC < 41bp 1 0.73961245831146 1 0.848078191280365 experiment 0.520775083377079 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188102 chr17:21188099 . . 0 18 hm5C_associated_SNPs_12323 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188104 + 21188084 21188124 41 CGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTC CGCCGCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTC < 41bp 1 0.407387653972675 1 0.765058159828186 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188104 chr17:21188099 . . 0 16 hm5C_associated_SNPs_12324 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188105 + 21188085 21188125 41 GCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCC GCCGCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCC < 41bp 1 0.718807307408642 1 0.9256192445755 experiment 0.562385385182716 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188105 chr17:21188099 . . 0 15 hm5C_associated_SNPs_12325 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188107 + 21188087 21188127 41 CGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTC CGCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCCTC < 41bp 1 0.345378540113727 1 0.863949179649353 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188107 chr17:21188099 . . 0 13 hm5C_associated_SNPs_12326 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188108 + 21188088 21188128 41 GCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCC GCAGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCCTCC < 41bp 1 0.639252581991632 1 0.856318235397339 experiment 0.721494836016736 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188108 chr17:21188099 . . 0 12 hm5C_associated_SNPs_12327 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188110 + 21188090 21188130 41 AGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGC AGTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGC < 41bp 1 0.425882977594585 1 0.677108943462372 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188110 chr17:21188099 . . 0 10 hm5C_associated_SNPs_12328 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188111 + 21188091 21188131 41 GTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCC GTCGCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCC < 41bp 1 0.638491556309427 1 0.662299811840057 experiment 0.723016887381145 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188111 chr17:21188099 . . 0 9 hm5C_associated_SNPs_12329 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188099 21188099 1 + C T rs55767533 21188114 + 21188094 21188134 41 GCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCCTGG GCCGCTGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCCTGG < 41bp 1 0.746589831645374 1 0.508480608463287 experiment 0.506820336709252 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188114 chr17:21188099 . . 0 6 hm5C_associated_SNPs_12330 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188101 + 21188081 21188121 41 CCTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTG CCTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCG < 41bp 1 0.409079937838105 1 0.452276200056076 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188101 chr17:21188120 . . 0 40 hm5C_associated_SNPs_12331 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188102 + 21188082 21188122 41 CTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGC CTCGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGC < 41bp 1 0.686806434086003 1 0.80997622013092 experiment 0.626387131827994 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188102 chr17:21188120 . . 0 39 hm5C_associated_SNPs_12332 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188104 + 21188084 21188124 41 CGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTC CGCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTC < 41bp 1 0.430338189459969 1 0.57798570394516 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188104 chr17:21188120 . . 0 37 hm5C_associated_SNPs_12333 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188105 + 21188085 21188125 41 GCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCC GCCGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCC < 41bp 1 0.768913390569673 1 0.874431729316711 experiment 0.462173218860654 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188105 chr17:21188120 . . 0 36 hm5C_associated_SNPs_12334 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188107 + 21188087 21188127 41 CGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTC CGCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCTC < 41bp 1 0.372956174228679 1 0.738207876682281 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188107 chr17:21188120 . . 0 34 hm5C_associated_SNPs_12335 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188108 + 21188088 21188128 41 GCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCC GCAGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCC < 41bp 1 0.680402935731495 1 0.844474673271179 experiment 0.639194128537011 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188108 chr17:21188120 . . 0 33 hm5C_associated_SNPs_12336 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188110 + 21188090 21188130 41 AGTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGC AGTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCCGC < 41bp 1 0.466398812640036 1 0.772051870822906 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188110 chr17:21188120 . . 0 31 hm5C_associated_SNPs_12337 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188111 + 21188091 21188131 41 GTCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCC GTCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCCGCC < 41bp 1 0.669987192844853 1 0.801268696784973 experiment 0.660025614310295 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188111 chr17:21188120 . . 0 30 hm5C_associated_SNPs_12338 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21188120 21188120 1 + T C rs565637100 21188114 + 21188094 21188134 41 GCCGCCGCCGCCGCCGCCGCCGCCGCTGCTCCTCCGCCTGG GCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCTCCGCCTGG < 41bp 1 0.692864917785697 1 0.620034873485565 experiment 0.614270164428606 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K3 ENSG00000034152 UTR5 Human protein_coding chr17:21188114 chr17:21188120 . . 0 27 hm5C_associated_SNPs_12339 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:21188080-21188143
64251 chr17 21731041 21731041 1 + G A rs145087783 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCAACCAGCAGAGGCTCATCTT < 41bp 1 0.243406263688459 1 0.259616941213608 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731041 nonsynonymous SNV 0.729 1 22 hm5C_associated_SNPs_12342 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr17 26654455 26654455 1 + A G rs556567668 26654467 + 26654447 26654487 41 AAACTGCTAAAGAACATGGCCTGTTTGACATGTTCATGAGT AAACTGCTGAAGAACATGGCCTGTTTGACATGTTCATGAGT < 41bp 1 0.319457136624501 1 0.0678235590457916 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654467 chr17:26654455 . . 0 9 hm5C_associated_SNPs_12343 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:26654440-26654460
64251 chr17 26672162 26672162 1 + T C rs556668726 26672182 + 26672162 26672202 41 TGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTGT CGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTGT < 41bp 1 0.688447368140474 1 0.946739912033081 experiment 0.623105263719052 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26672182 chr17:26672162 . . 0 1 hm5C_associated_SNPs_12344 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:26672129-26672168
64251 chr17 26672200 26672200 1 + T G rs374010963 26672182 + 26672162 26672202 41 TGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCTGT TGACAGAACCCTTGGCCCTTCTCCATGCCTGTGGGATCGGT < 41bp 1 0.663007983451637 1 0.9451864361763 experiment 0.673984033096726 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNFAIP1 ENSG00000109079 UTR3 Human protein_coding chr17:26672182 chr17:26672200 . . 0 39 hm5C_associated_SNPs_12345 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:26672178-26672207
64251 chr17 26725032 26725032 1 - T C rs189069712 26725014 - 26724994 26725034 41 CCAAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGC CCGAAGCATCGAGGCTGGCACTGGCCAAGACAGACTCTGGC < 41bp 1 0.544990119374951 1 0.421975046396255 experiment 0.910019761250098 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SARM1;SLC46A1 ENSG00000004139;ENSG00000076351 UTR3 Human other chr17:26725014 chr17:26725032 . . 0 3 hm5C_associated_SNPs_12347 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr17:26725032-26725033
64251 chr17 27011952 27011952 1 + A G rs535517531 27011948 + 27011928 27011968 41 CCATTTTACCAAACGGCGAACTGCATGGAGAGAGGAAGAGC CCATTTTACCAAACGGCGAACTGCGTGGAGAGAGGAAGAGC < 41bp 1 0.420203382610641 1 0.429911524057388 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011948 chr17:27011952 synonymous SNV . 0 25 hm5C_associated_SNPs_12348 0 0 13 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:27011940-27011960
64251 chr17 27047341 27047341 1 + G A rs113797834 27047345 + 27047325 27047365 41 GGAGCTCCATGTCCCCGGGCCTGTAAGGAATTAGTGCCCTC GGAGCTCCATGTCCCCAGGCCTGTAAGGAATTAGTGCCCTC < 41bp 1 0.474783311495381 1 0.226414114236832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27047345 chr17:27047341 nonsynonymous SNV 0.009 1 17 hm5C_associated_SNPs_12349 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:27047291-27047354
64251 chr17 27047349 27047349 1 + A G rs573745975 27047345 + 27047325 27047365 41 GGAGCTCCATGTCCCCGGGCCTGTAAGGAATTAGTGCCCTC GGAGCTCCATGTCCCCGGGCCTGTGAGGAATTAGTGCCCTC < 41bp 1 0.31912149500457 1 0.141162037849426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27047345 chr17:27047349 nonsynonymous SNV 0.011 1 25 hm5C_associated_SNPs_12350 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:27047291-27047354
64251 chr17 27049651 27049651 1 + T C rs187794123 27049634 + 27049614 27049654 41 CACTGTAAAGCGACCAAAGTCTGAACAAAGTGATTGGTACC CACTGTAAAGCGACCAAAGTCTGAACAAAGTGATTGGCACC < 41bp 1 0.577587448866234 1 0.763540983200073 experiment 0.844825102267531 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4A ENSG00000238578;ENSG00000264577 ncRNA_exonic Human other chr17:27049634 chr17:27049651 . . 0 38 hm5C_associated_SNPs_12351 0 0 78 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27049589-27049680
64251 chr17 27049651 27049651 1 + T C rs187794123 27049668 + 27049648 27049688 41 TGGTACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCT TGGCACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCT < 41bp 1 0.306718184507194 1 0.160517036914825 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4A ENSG00000238578;ENSG00000264577 ncRNA_exonic Human other chr17:27049668 chr17:27049651 . . 0 4 hm5C_associated_SNPs_12352 0 0 78 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27049589-27049680
64251 chr17 27049651 27049651 1 + T C rs187794123 27049670 + 27049650 27049690 41 GTACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCTGG GCACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCTGG < 41bp 1 0.0835970758651676 1 0.115215599536896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD4A ENSG00000238578;ENSG00000264577 ncRNA_exonic Human other chr17:27049670 chr17:27049651 . . 0 2 hm5C_associated_SNPs_12353 0 0 78 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27049589-27049680
64251 chr17 27050723 27050723 1 + C G rs76539025 27050726 + 27050706 27050746 41 AATGATGCATATGTTAGCGACCAAAGCCTGATCTTTGCTGA AATGATGCATATGTTAGGGACCAAAGCCTGATCTTTGCTGA < 41bp 1 0.199825594697428 1 0.220932364463806 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4B ENSG00000198242 CDS Human protein_coding chr17:27050726 chr17:27050723 unknown . 0 18 hm5C_associated_SNPs_12354 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:27050718-27050766
64251 chr17 27050723 27050723 1 + C G rs76539025 27050732 + 27050712 27050752 41 GCATATGTTAGCGACCAAAGCCTGATCTTTGCTGATTAGTC GCATATGTTAGGGACCAAAGCCTGATCTTTGCTGATTAGTC < 41bp 1 0.241461622247022 1 0.0644412040710449 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4B ENSG00000198242 CDS Human protein_coding chr17:27050732 chr17:27050723 unknown . 0 12 hm5C_associated_SNPs_12355 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:27050718-27050766
64251 chr17 27050723 27050723 1 + C G rs76539025 27050733 + 27050713 27050753 41 CATATGTTAGCGACCAAAGCCTGATCTTTGCTGATTAGTCA CATATGTTAGGGACCAAAGCCTGATCTTTGCTGATTAGTCA < 41bp 1 0.219282367229272 1 0.0828166604042053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4B ENSG00000198242 CDS Human protein_coding chr17:27050733 chr17:27050723 unknown . 0 11 hm5C_associated_SNPs_12356 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:27050718-27050766
64251 chr17 27050723 27050723 1 + C G rs76539025 27050738 + 27050718 27050758 41 GTTAGCGACCAAAGCCTGATCTTTGCTGATTAGTCATAATT GTTAGGGACCAAAGCCTGATCTTTGCTGATTAGTCATAATT < 41bp 1 0.120040476511764 1 0.0862440466880798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4B ENSG00000198242 CDS Human protein_coding chr17:27050738 chr17:27050723 unknown . 0 6 hm5C_associated_SNPs_12357 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:27050718-27050766
64251 chr17 27875794 27875794 1 + G A rs549682912 27875803 + 27875783 27875823 41 TAAAGTTTATAGGTCTGTGCCAGCTAGAGAGAAGTTGCTGT TAAAGTTTATAAGTCTGTGCCAGCTAGAGAGAAGTTGCTGT < 41bp 1 0.155048120134569 1 0.376796245574951 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK1 ENSG00000160551 UTR3 Human protein_coding chr17:27875803 chr17:27875794 . . 0 12 hm5C_associated_SNPs_12358 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:27875737-27875815
64251 chr17 27899986 27899986 1 + C G rs11541471 27899975 + 27899955 27899995 41 TGCCACTGTGGCGTGCGGCTCCTCCCCGCGCCGCGAGGCCG TGCCACTGTGGCGTGCGGCTCCTCCCCGCGCGGCGAGGCCG < 41bp 1 0.116894497284885 1 0.0321709215641022 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TP53I13 ENSG00000264031 ncRNA_intronic Human antisense chr17:27899975 chr17:27899986 . . 0 32 hm5C_associated_SNPs_12359 0 0 5 BUD13 POSTAR2 ENCODE chr17:27899942-27900003
64251 chr17 28444183 28444183 1 + A C rs6505162 28444163 + 28444143 28444183 41 TCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTAA TCCAAAAGCTCGGTCTGAGGCCCCTCAGTCTTGCTTCCTAC < 41bp 1 0.238372095743962 1 0.0701976418495178 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR423 ENSG00000199071;ENSG00000266919 ncRNA_exonic Human other chr17:28444163 chr17:28444183 . . 0 41 hm5C_associated_SNPs_12360 0 0 2 DGCR8 POSTAR2 ENCODE chr17:28444176-28444201
64251 chr17 28712037 28712037 1 + C T rs117723754 28712048 + 28712028 28712068 41 GCATGGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATGATT GCATGGTGGTTCAGTGGTAGCAAGCTATCCTTTTGATGATT < 41bp 1 0.432331048858372 1 0.3496073782444 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28712048 chr17:28712037 synonymous SNV . 0 10 hm5C_associated_SNPs_12361 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr17:28712007-28712041
64251 chr17 28961059 28961059 1 + C T rs9913939 28961053 + 28961033 28961073 41 TATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGAC TATGACTATAAGAACAAACTCATCTTTGCAATATCTGTGAC < 41bp 1 0.0824288937283098 1 0.159927725791931 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961053 chr17:28961059 . . 0 27 hm5C_associated_SNPs_12364 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr17:28961031-28961060
64251 chr17 28961060 28961060 1 + G A rs192845598 28961053 + 28961033 28961073 41 TATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGAC TATGACTATAAGAACAAACTCATCTTCACAATATCTGTGAC < 41bp 1 0.0624041293269356 1 0.305442333221436 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961053 chr17:28961060 . . 0 28 hm5C_associated_SNPs_12365 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr17:28961031-28961060
64251 chr17 29877141 29877141 1 + C A rs575764901 29877123 + 29877103 29877143 41 CCAAGTGGTAAGGCGTCGGTCTCGTAAACCGAAGATCGCGG CCAAGTGGTAAGGCGTCGGTCTCGTAAACCGAAGATCGAGG < 41bp 1 0.598835204966828 1 0.154119402170181 experiment 0.802329590066345 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877123 chr17:29877141 . . 0 39 hm5C_associated_SNPs_12368 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877131 + 29877111 29877151 41 TAAGGCGTCGGTCTCGTAAACCGAAGATCGCGGGTTCGAAC TAAGGCGTCGGTCTCGTAAACCGAAGATCGAGGGTTCGAAC < 41bp 1 0.760890021239571 1 0.122164040803909 experiment 0.478219957520858 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877131 chr17:29877141 . . 0 31 hm5C_associated_SNPs_12369 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877132 + 29877112 29877152 41 AAGGCGTCGGTCTCGTAAACCGAAGATCGCGGGTTCGAACC AAGGCGTCGGTCTCGTAAACCGAAGATCGAGGGTTCGAACC < 41bp 1 0.772871566021237 1 0.724373936653137 experiment 0.454256867957526 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877132 chr17:29877141 . . 0 30 hm5C_associated_SNPs_12370 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877147 + 29877127 29877167 41 TAAACCGAAGATCGCGGGTTCGAACCCCGTCCGTGCCTGAG TAAACCGAAGATCGAGGGTTCGAACCCCGTCCGTGCCTGAG < 41bp 1 0.217606406791765 1 0.130625247955322 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877147 chr17:29877141 . . 0 15 hm5C_associated_SNPs_12371 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877151 + 29877131 29877171 41 CCGAAGATCGCGGGTTCGAACCCCGTCCGTGCCTGAGACCC CCGAAGATCGAGGGTTCGAACCCCGTCCGTGCCTGAGACCC < 41bp 1 0.588100189612457 1 0.0459003150463104 experiment 0.823799620775085 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877151 chr17:29877141 . . 0 11 hm5C_associated_SNPs_12372 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877152 + 29877132 29877172 41 CGAAGATCGCGGGTTCGAACCCCGTCCGTGCCTGAGACCCG CGAAGATCGAGGGTTCGAACCCCGTCCGTGCCTGAGACCCG < 41bp 1 0.405853903302795 1 0.194780915975571 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877152 chr17:29877141 . . 0 10 hm5C_associated_SNPs_12373 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877153 + 29877133 29877173 41 GAAGATCGCGGGTTCGAACCCCGTCCGTGCCTGAGACCCGA GAAGATCGAGGGTTCGAACCCCGTCCGTGCCTGAGACCCGA < 41bp 1 0.171352282117695 1 0.0794825255870819 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877153 chr17:29877141 . . 0 9 hm5C_associated_SNPs_12374 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877154 + 29877134 29877174 41 AAGATCGCGGGTTCGAACCCCGTCCGTGCCTGAGACCCGAG AAGATCGAGGGTTCGAACCCCGTCCGTGCCTGAGACCCGAG < 41bp 1 0.250595106408368 1 0.164107829332352 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877154 chr17:29877141 . . 0 8 hm5C_associated_SNPs_12375 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 29877141 29877141 1 + C A rs575764901 29877158 + 29877138 29877178 41 TCGCGGGTTCGAACCCCGTCCGTGCCTGAGACCCGAGGTAG TCGAGGGTTCGAACCCCGTCCGTGCCTGAGACCCGAGGTAG < 41bp 1 0.353556838437571 1 0.313219308853149 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control RAB11FIP4;MIR193A ENSG00000131242;ENSG00000207614 intergenic Human other chr17:29877158 chr17:29877141 . . 0 4 hm5C_associated_SNPs_12376 0 0 47 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29877126-29877148
64251 chr17 30692396 30692396 1 + G T rs3795244 30692381 + 30692361 30692401 41 CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAG CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAATCACAG < 41bp 1 0.113218387896344 1 0.261854857206345 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692381 chr17:30692396 nonsynonymous SNV 0.998 1 36 hm5C_associated_SNPs_12378 0 1 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:30692384-30692411
64251 chr17 33593207 33593207 1 + A G rs12150001 33593214 + 33593194 33593234 41 TGTGCGCGCGCGCACGTGCACATGTGTGTAGGTAGATGGAG TGTGCGCGCGCGCGCGTGCACATGTGTGTAGGTAGATGGAG < 41bp 1 0.687469895126017 1 0.0737942159175873 experiment 0.625060209747966 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLFN5 ENSG00000166750 UTR3 Human protein_coding chr17:33593214 chr17:33593207 . . 0 14 hm5C_associated_SNPs_12379 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:33593139-33593265
64251 chr17 33900695 33900695 1 + A G rs114393730 33900679 + 33900659 33900699 41 GGAGATGAAATGCAGCGATGCGATGATGAGTGAAGTAGAGC GGAGATGAAATGCAGCGATGCGATGATGAGTGAAGTGGAGC < 41bp 1 0.408100357345213 1 0.109960287809372 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900679 chr17:33900695 . . 0 37 hm5C_associated_SNPs_12380 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:33900659-33900710
64251 chr17 33900695 33900695 1 + A G rs114393730 33900704 + 33900684 33900724 41 ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCA ATGAGTGAAGTGGAGCCTGACCTGGTATTGCCATTGCTTCA < 41bp 1 0.318118789680032 1 0.0546510219573975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900704 chr17:33900695 . . 0 12 hm5C_associated_SNPs_12381 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:33900659-33900710
64251 chr17 33900695 33900695 1 + A G rs114393730 33900705 + 33900685 33900725 41 TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCAC TGAGTGAAGTGGAGCCTGACCTGGTATTGCCATTGCTTCAC < 41bp 1 0.787306584654906 1 0.0941567718982697 experiment 0.425386830690188 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900705 chr17:33900695 . . 0 11 hm5C_associated_SNPs_12382 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:33900659-33900710
64251 chr17 33900695 33900695 1 + A G rs114393730 33900715 + 33900695 33900735 41 AGAGCCTGACCTGGTATTGCCATTGCTTCACTGTTGGCTTT GGAGCCTGACCTGGTATTGCCATTGCTTCACTGTTGGCTTT < 41bp 1 0.239924565503463 1 0.129554212093353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900715 chr17:33900695 . . 0 1 hm5C_associated_SNPs_12383 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:33900659-33900710
64251 chr17 33900719 33900719 1 + G T rs561687613 33900704 + 33900684 33900724 41 ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCA ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTTCTTCA < 41bp 1 0.239135640742566 1 0.0365680754184723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900704 chr17:33900719 . . 0 36 hm5C_associated_SNPs_12384 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900719 33900719 1 + G T rs561687613 33900705 + 33900685 33900725 41 TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCAC TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTTCTTCAC < 41bp 1 0.787937853022014 1 0.0491121113300323 experiment 0.424124293955971 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900705 chr17:33900719 . . 0 35 hm5C_associated_SNPs_12385 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900719 33900719 1 + G T rs561687613 33900715 + 33900695 33900735 41 AGAGCCTGACCTGGTATTGCCATTGCTTCACTGTTGGCTTT AGAGCCTGACCTGGTATTGCCATTTCTTCACTGTTGGCTTT < 41bp 1 0.113558657167999 1 0.0965151786804199 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900715 chr17:33900719 . . 0 25 hm5C_associated_SNPs_12386 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900719 33900719 1 + G T rs561687613 33900725 + 33900705 33900745 41 CTGGTATTGCCATTGCTTCACTGTTGGCTTTGACCAGGGTA CTGGTATTGCCATTTCTTCACTGTTGGCTTTGACCAGGGTA < 41bp 1 0.340692310381638 1 0.152441650629044 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900725 chr17:33900719 . . 0 15 hm5C_associated_SNPs_12387 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 34051052 34051052 1 + C T rs141919698 34051057 + 34051037 34051077 41 TTGTAATTGAGAGCTCATTTCAAAAGCAGAAAAAGACAACA TTGTAATTGAGAGCTTATTTCAAAAGCAGAAAAAGACAACA < 41bp 1 0.490745789507318 1 0.656023442745209 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34051057 chr17:34051052 . . 0 16 hm5C_associated_SNPs_12388 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:34051017-34051057
64251 chr17 34052513 34052513 1 + C T rs17638867 34052508 + 34052488 34052528 41 GTTGCAAAGCTTGTGGGGAGCGGTCCCACAAAGCACTTTCT GTTGCAAAGCTTGTGGGGAGCGGTCTCACAAAGCACTTTCT < 41bp 1 0.394829626490354 1 0.247523039579391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AP2B1 ENSG00000006125 UTR3 Human protein_coding chr17:34052508 chr17:34052513 . . 0 26 hm5C_associated_SNPs_12389 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr17:34052496-34052520
64251 chr17 34058838 34058838 1 + G T rs587755687 34058834 + 34058814 34058854 41 GCCGGGGGGCAGCGCCGGAGCCCGGGGGGAGCTCAGCCCCG GCCGGGGGGCAGCGCCGGAGCCCGTGGGGAGCTCAGCCCCG < 41bp 1 0.781262640631837 1 0.423402100801468 experiment 0.437474718736325 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RASL10B ENSG00000141150 UTR5 Human other chr17:34058834 chr17:34058838 . . 0 25 hm5C_associated_SNPs_12390 0 0 4 CSTF2T POSTAR2 ENCODE chr17:34058817-34058857
64251 chr17 34058838 34058838 1 + G T rs587755687 34058835 + 34058815 34058855 41 CCGGGGGGCAGCGCCGGAGCCCGGGGGGAGCTCAGCCCCGC CCGGGGGGCAGCGCCGGAGCCCGTGGGGAGCTCAGCCCCGC < 41bp 1 0.719682335422608 1 0.717686414718628 experiment 0.560635329154785 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RASL10B ENSG00000141150 UTR5 Human other chr17:34058835 chr17:34058838 . . 0 24 hm5C_associated_SNPs_12391 0 0 4 CSTF2T POSTAR2 ENCODE chr17:34058817-34058857
64251 chr17 34070282 34070282 1 + G C rs113987049 34070289 + 34070269 34070309 41 AGGCACCTGGGGTGGGGGGGCGGAGCCCAGGCCTCTGGCTG AGGCACCTGGGGTCGGGGGGCGGAGCCCAGGCCTCTGGCTG < 41bp 1 0.619927090093105 1 0.874453485012054 experiment 0.76014581981379 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RASL10B ENSG00000141150 UTR3 Human other chr17:34070289 chr17:34070282 . . 0 14 hm5C_associated_SNPs_12392 0 0 1 FBL POSTAR2 GSE43666,GSM1067865 chr17:34070249-34070294
64251 chr17 34070283 34070283 1 + G A rs226417 34070289 + 34070269 34070309 41 AGGCACCTGGGGTGGGGGGGCGGAGCCCAGGCCTCTGGCTG AGGCACCTGGGGTGAGGGGGCGGAGCCCAGGCCTCTGGCTG < 41bp 1 0.653454262744866 1 0.849496603012085 experiment 0.693091474510267 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RASL10B ENSG00000141150 UTR3 Human other chr17:34070289 chr17:34070283 . . 0 15 hm5C_associated_SNPs_12393 0 0 1 FBL POSTAR2 GSE43666,GSM1067865 chr17:34070249-34070294
64251 chr17 35414122 35414122 1 + C T rs34871681 35414116 + 35414096 35414136 41 GCCTAATACACGCAAGGGCGCTGTCCCGCCCAACCCCGCCT GCCTAATACACGCAAGGGCGCTGTCCTGCCCAACCCCGCCT < 41bp 1 0.486481661716457 1 0.0327925384044647 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AATF ENSG00000108270 UTR3 Human other chr17:35414116 chr17:35414122 . . 0 27 hm5C_associated_SNPs_12399 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:35414089-35414131
64251 chr17 36619139 36619139 1 + T C rs61999279 36619123 + 36619103 36619143 41 CCGCCTGGAGCCCATGGACACCATCTTTGTCAAGAATGTGA CCGCCTGGAGCCCATGGACACCATCTTTGTCAAGAACGTGA < 41bp 1 0.0363516451602383 1 0.0406434834003448 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP23 ENSG00000225485 CDS Human other chr17:36619123 chr17:36619139 synonymous SNV . 0 37 hm5C_associated_SNPs_12401 0 0 1 DGCR8 POSTAR2 ENCODE chr17:36619137-36619175
64251 chr17 36890623 36890623 1 - C T rs111988561 36890640 - 36890620 36890660 41 CCTTACCCTCACCGGGGAACCCTCACTAGCAGGACTGGTGG CCTTACCCTCACCGGGGAACCCTCACTAGCAGGACTGATGG < 41bp 1 0.465893686903536 1 0.113353192806244 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CISD3;PCGF2 ENSG00000056661;ENSG00000230055 UTR3 Human other chr17:36890640 chr17:36890623 . . 0 38 hm5C_associated_SNPs_12404 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:36890597-36890627
64251 chr17 36890623 36890623 1 - C T rs111988561 36890641 - 36890621 36890661 41 ACCTTACCCTCACCGGGGAACCCTCACTAGCAGGACTGGTG ACCTTACCCTCACCGGGGAACCCTCACTAGCAGGACTGATG < 41bp 1 0.0579669671019102 1 0.0263895094394684 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CISD3;PCGF2 ENSG00000056661;ENSG00000230055 UTR3 Human other chr17:36890641 chr17:36890623 . . 0 39 hm5C_associated_SNPs_12405 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:36890597-36890627
64251 chr17 37023910 37023910 1 + C G rs117293333 37023921 + 37023901 37023941 41 GGTATAGCTCAGTGGTAGAGCATTTGACTGCAGATCAAGAG GGTATAGCTGAGTGGTAGAGCATTTGACTGCAGATCAAGAG < 41bp 1 0.148989933048665 1 0.120792955160141 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL23;LASP1 ENSG00000244086;ENSG00000002834 intergenic Human other chr17:37023921 chr17:37023910 . . 0 10 hm5C_associated_SNPs_12406 0 0 8 SSB POSTAR2 GSE95683,GSM2521599 chr17:37023890-37023930
64251 chr17 37023968 37023968 1 + C A rs182985889 37023964 + 37023944 37023984 41 CCCCGGTTCAAATCCGGGTGCCCCCTCGGGTTTCTTTAAGT CCCCGGTTCAAATCCGGGTGCCCCATCGGGTTTCTTTAAGT < 41bp 1 0.204229739216839 1 0.117579996585846 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target RPL23;LASP1 ENSG00000244086;ENSG00000002834 intergenic Human other chr17:37023964 chr17:37023968 . . 0 25 hm5C_associated_SNPs_12407 0 0 23 SSB POSTAR2 GSE95683,GSM2521599 chr17:37023920-37023980
64251 chr17 37070646 37070646 1 + G A rs143838983 37070657 + 37070637 37070677 41 GGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC GGAGCCAGAACGTCGGGATTCACAGGACGGCAGCAGCTACC < 41bp 1 0.744284453610162 1 0.110614091157913 experiment 0.511431092779675 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070657 chr17:37070646 synonymous SNV . 0 10 hm5C_associated_SNPs_12408 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:37070640-37070660
64251 chr17 37070658 37070658 1 + A C rs525989 37070657 + 37070637 37070677 41 GGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC GGAGCCAGAGCGTCGGGATTCCCAGGACGGCAGCAGCTACC < 41bp 1 0.546624134629239 1 0.147747993469238 experiment 0.906751730741521 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070657 chr17:37070658 synonymous SNV . 0 22 hm5C_associated_SNPs_12409 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:37070640-37070660
64251 chr17 37075096 37075096 1 + C A rs114909359 37075095 + 37075075 37075115 41 GCATCCGTCCTGGGCGTGACCCGTCCATTCTTCAGTGTCTC GCATCCGTCCTGGGCGTGACCAGTCCATTCTTCAGTGTCTC < 41bp 1 0.158830500988017 1 0.0802165269851685 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LASP1 ENSG00000265784 ncRNA_exonic Human antisense chr17:37075095 chr17:37075096 . . 0 22 hm5C_associated_SNPs_12410 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:37075071-37075145
64251 chr17 37075506 37075506 1 + G A rs660413 37075510 + 37075490 37075530 41 CTCTGCCGCTGTGTAGGGACCAGTGGGATGGGCTCTACCTC CTCTGCCGCTGTGTAGAGACCAGTGGGATGGGCTCTACCTC < 41bp 1 0.585784490261328 1 0.667814016342163 experiment 0.828431019477343 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000265784 ncRNA_intronic Human antisense chr17:37075510 chr17:37075506 . . 0 17 hm5C_associated_SNPs_12411 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:37075455-37075548
64251 chr17 37358647 37358647 1 + C A rs2228666 37358628 + 37358608 37358648 41 ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCAG < 41bp 1 0.122473289885601 1 0.0301035642623901 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358628 chr17:37358647 synonymous SNV . 0 40 hm5C_associated_SNPs_12412 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358647 37358647 1 + C A rs2228666 37358657 + 37358637 37358677 41 GGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA GGCTCGATGCAGGAAAAACACCTTGGCCCGCCGGAAGGGCA < 41bp 1 0.216463622673647 1 0.118910044431686 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358657 chr17:37358647 synonymous SNV . 0 11 hm5C_associated_SNPs_12413 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358647 37358647 1 + C A rs2228666 37358663 + 37358643 37358683 41 ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA ATGCAGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA < 41bp 1 0.243437730770942 1 0.063463419675827 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358663 chr17:37358647 synonymous SNV . 0 5 hm5C_associated_SNPs_12414 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358647 37358647 1 + C A rs2228666 37358664 + 37358644 37358684 41 TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT TGCAGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT < 41bp 1 0.236601958359804 1 0.133879870176315 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358664 chr17:37358647 synonymous SNV . 0 4 hm5C_associated_SNPs_12415 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358647 37358647 1 + C A rs2228666 37358665 + 37358645 37358685 41 GCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATG GCAGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATG < 41bp 1 0.764593453263972 1 0.121195614337921 experiment 0.470813093472057 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358665 chr17:37358647 synonymous SNV . 0 3 hm5C_associated_SNPs_12416 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358647 37358647 1 + C A rs2228666 37358667 + 37358647 37358687 41 CGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGG AGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGG < 41bp 1 0.789505166669501 1 0.441315650939941 experiment 0.420989666660998 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358667 chr17:37358647 synonymous SNV . 0 1 hm5C_associated_SNPs_12417 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358679 37358679 1 + G A rs201777990 37358663 + 37358643 37358683 41 ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGACACA < 41bp 1 0.19517879025496 1 0.0392897427082062 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358663 chr17:37358679 synonymous SNV . 0 37 hm5C_associated_SNPs_12418 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358679 37358679 1 + G A rs201777990 37358664 + 37358644 37358684 41 TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGACACAT < 41bp 1 0.225418906330266 1 0.0684616565704346 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358664 chr17:37358679 synonymous SNV . 0 36 hm5C_associated_SNPs_12419 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358679 37358679 1 + G A rs201777990 37358665 + 37358645 37358685 41 GCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATG GCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGACACATG < 41bp 1 0.740294358073804 1 0.105392545461655 experiment 0.519411283852392 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358665 chr17:37358679 synonymous SNV . 0 35 hm5C_associated_SNPs_12420 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358679 37358679 1 + G A rs201777990 37358667 + 37358647 37358687 41 CGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGG CGGAAAAACACCTTGGCCCGCCGGAAGGGCAGACACATGGG < 41bp 1 0.77053597532774 1 0.443522065877914 experiment 0.458928049344521 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358667 chr17:37358679 synonymous SNV . 0 33 hm5C_associated_SNPs_12421 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358679 37358679 1 + G A rs201777990 37358680 + 37358660 37358700 41 TGGCCCGCCGGAAGGGCAGGCACATGGGCATAGGTAAGTGT TGGCCCGCCGGAAGGGCAGACACATGGGCATAGGTAAGTGT < 41bp 1 0.35980387595095 1 0.178043186664581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358680 chr17:37358679 synonymous SNV . 0 20 hm5C_associated_SNPs_12422 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358679 37358679 1 + G A rs201777990 37358688 + 37358668 37358708 41 CGGAAGGGCAGGCACATGGGCATAGGTAAGTGTGGTCATCT CGGAAGGGCAGACACATGGGCATAGGTAAGTGTGGTCATCT < 41bp 1 0.206243149477929 1 0.0847881138324738 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358688 chr17:37358679 synonymous SNV . 0 12 hm5C_associated_SNPs_12423 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37676269 37676269 1 + G T rs61747400 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGCGTTGCACAGCTGAACAGACCCTACA < 41bp 1 0.26134327868597 1 0.128199607133865 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676269 synonymous SNV . 0 18 hm5C_associated_SNPs_12424 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr17 37681085 37681085 1 + C T rs538927859 37681077 + 37681057 37681097 41 ACTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTCAGCC ACTGAGCCTGTGAAGAACAGCAGCCCAGTACCACCTCAGCC < 41bp 1 0.372007798762815 1 0.466533720493317 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37681077 chr17:37681085 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_12425 0 0 3 GRWD1 POSTAR2 ENCODE chr17:37681009-37681097
64251 chr17 37809750 37809750 1 + G A rs201782167 37809758 + 37809738 37809778 41 GCTGCTGAGGCCGCGCCCTCCCCGCCCTGAGGTGGGGGCCC GCTGCTGAGGCCACGCCCTCCCCGCCCTGAGGTGGGGGCCC < 41bp 1 0.188046100961632 1 0.504662752151489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STARD3 ENSG00000131748 UTR5 Human protein_coding chr17:37809758 chr17:37809750 . . 0 13 hm5C_associated_SNPs_12426 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:37809733-37809775
64251 chr17 37814080 37814080 1 + G A rs1877031 37814079 + 37814059 37814099 41 TCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTG TCCTAGGCTATGCCGTGCTGCAGCTCCGGCACTGGTGGGTG < 41bp 1 0.405495431410254 1 0.170491755008698 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814079 chr17:37814080 nonsynonymous SNV 0.635 2 22 hm5C_associated_SNPs_12427 0 1 4 DDX24 POSTAR2 ENCODE chr17:37814031-37814105
64251 chr17 37814086 37814086 1 + G A rs140618662 37814079 + 37814059 37814099 41 TCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTG TCCTAGGCTATGCCGTGCTGCGGCTCCAGCACTGGTGGGTG < 41bp 1 0.421297593000522 1 0.246691793203354 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814079 chr17:37814086 nonsynonymous SNV 0.302 0 28 hm5C_associated_SNPs_12428 0 0 4 DDX24 POSTAR2 ENCODE chr17:37814031-37814105
64251 chr17 37864584 37864584 1 + A C rs61737968 37864579 + 37864559 37864599 41 GCTTCCCCCTCCCAGGATATCCAGGAGGTGCAGGGCTACGT GCTTCCCCCTCCCAGGATATCCAGGCGGTGCAGGGCTACGT < 41bp 1 0.420012877991733 1 0.713628172874451 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37864579 chr17:37864584 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_12429 1 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:37864570-37864604
64251 chr17 38137364 38137364 1 + G A rs3087852 38137363 + 38137343 38137383 41 GGCAGCGACGGGTGGCGGGTCGACGGGGGAGGCAGACGGCA GGCAGCGACGGGTGGCGGGTCAACGGGGGAGGCAGACGGCA < 41bp 1 0.740037533843749 1 0.79177188873291 experiment 0.519924932312502 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38137363 chr17:38137364 synonymous SNV . 0 22 hm5C_associated_SNPs_12430 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:38137360-38137400
64251 chr17 38230516 38230516 1 + G A rs547817957 38230508 + 38230488 38230528 41 CACAGCCCGGGACCCACAAACCCAGCTTGCCCCCAGCCCTC CACAGCCCGGGACCCACAAACCCAGCTTACCCCCAGCCCTC < 41bp 1 0.406247730755394 1 0.431900203227997 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient THRA ENSG00000126351 UTR5 Human protein_coding chr17:38230508 chr17:38230516 . . 0 29 hm5C_associated_SNPs_12431 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:38230471-38230530
64251 chr17 38288318 38288318 1 + T C rs77077922 38288303 + 38288283 38288323 41 TCAGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCTCTAAG TCAGTTCCTTCTTGGAGGGACCACTCAGTAGAGCCCCTAAG < 41bp 1 0.0567846805573132 1 0.0727232098579407 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MSL1 ENSG00000188895 CDS Human protein_coding chr17:38288303 chr17:38288318 synonymous SNV . 0 36 hm5C_associated_SNPs_12432 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:38288307-38288329
64251 chr17 38474693 38474693 1 + G T rs114559376 38474697 + 38474677 38474717 41 ACGGGTTGCTTCCCCCGCTGCGAGGTAATTCCTCCCCTGGG ACGGGTTGCTTCCCCCTCTGCGAGGTAATTCCTCCCCTGGG < 41bp 1 0.63171767940009 1 0.821529448032379 experiment 0.73656464119982 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RARA ENSG00000131759 UTR5 Human protein_coding chr17:38474697 chr17:38474693 . . 0 17 hm5C_associated_SNPs_12433 0 0 1 PRPF8 POSTAR2 ENCODE chr17:38474676-38474740
64251 chr17 38487443 38487443 1 + G A rs144842676 38487428 + 38487408 38487448 41 TCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTGCCTCC TCTGAAGCCCACCAGAGCCCCCTGCCAGACTGTCTACCTCC < 41bp 1 0.0496387959889668 1 0.0723441243171692 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RARA ENSG00000131759 UTR5 Human protein_coding chr17:38487428 chr17:38487443 . . 0 36 hm5C_associated_SNPs_12435 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38487424-38487457
64251 chr17 38512763 38512763 1 + G A rs536667337 38512760 + 38512740 38512780 41 TCAGGATGGGTCCTGGGGGCCTCGTGTTCATCAAGACACCC TCAGGATGGGTCCTGGGGGCCTCATGTTCATCAAGACACCC < 41bp 1 0.225674802014693 1 0.103575468063354 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARA ENSG00000131759 UTR3 Human protein_coding chr17:38512760 chr17:38512763 . . 0 24 hm5C_associated_SNPs_12444 0 0 2 CPSF2 POSTAR2 GSE37401,GSM917670 chr17:38512730-38512763
64251 chr17 39845231 39845231 1 + C T rs560903919 39845224 + 39845204 39845244 41 TTCCGTTCCCCCCTGCCCGCCTTCTCCCGCCACCGCCGCCG TTCCGTTCCCCCCTGCCCGCCTTCTCCTGCCACCGCCGCCG < 41bp 1 0.272283998753735 1 0.0860216021537781 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF1 ENSG00000173812 UTR5 Human protein_coding chr17:39845224 chr17:39845231 . . 0 28 hm5C_associated_SNPs_12445 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:39845121-39845273
64251 chr17 39845231 39845231 1 + C T rs560903919 39845245 + 39845225 39845265 41 TTCTCCCGCCACCGCCGCCGCCGCCTTCCGCAGGCCGTTTC TTCTCCTGCCACCGCCGCCGCCGCCTTCCGCAGGCCGTTTC < 41bp 1 0.486478886080751 1 0.0641334354877472 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF1 ENSG00000173812 UTR5 Human protein_coding chr17:39845245 chr17:39845231 . . 0 7 hm5C_associated_SNPs_12446 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:39845121-39845273
64251 chr17 39975563 39975563 1 + C A rs138089753 39975559 + 39975539 39975579 41 CAGCTAGAGACGCTGGAGCTCCCCCCCGGCTGTGTCCGCAG CAGCTAGAGACGCTGGAGCTCCCCACCGGCTGTGTCCGCAG < 41bp 1 0.619620907422826 1 0.763517260551453 experiment 0.760758185154349 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39975559 chr17:39975563 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_12447 0 0 5 GRWD1 POSTAR2 ENCODE chr17:39975506-39975564
64251 chr17 39976262 39976262 1 + T C rs137869582 39976269 + 39976249 39976289 41 AGTGGGCAAGCCATGCTGATCCGCAGGGTAAGTTACTGGGA AGTGGGCAAGCCACGCTGATCCGCAGGGTAAGTTACTGGGA < 41bp 1 0.422378973546544 1 0.227570563554764 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39976269 chr17:39976262 synonymous SNV . 0 14 hm5C_associated_SNPs_12448 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:39976246-39976291
64251 chr17 39976271 39976271 1 + G A rs7221862 39976269 + 39976249 39976289 41 AGTGGGCAAGCCATGCTGATCCGCAGGGTAAGTTACTGGGA AGTGGGCAAGCCATGCTGATCCACAGGGTAAGTTACTGGGA < 41bp 1 0.277012797219931 1 0.26714700460434 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39976269 chr17:39976271 synonymous SNV . 0 23 hm5C_associated_SNPs_12449 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:39976246-39976291
64251 chr17 39978052 39978052 1 + G A rs76022961 39978062 + 39978042 39978082 41 CAAGGATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT CAAGGATGGCAAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT < 41bp 1 0.545375225382018 1 0.667374908924103 experiment 0.909249549235964 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978062 chr17:39978052 nonsynonymous SNV 0.626 0 11 hm5C_associated_SNPs_12450 0 0 4 BUD13 POSTAR2 ENCODE chr17:39978027-39978066
64251 chr17 40459629 40459629 1 + G C rs191983922 40459614 + 40459594 40459634 41 ATGCTCCGTGCACCCAGGGCCATCCTAGGTTTTGTGAATAA ATGCTCCGTGCACCCAGGGCCATCCTAGGTTTTGTCAATAA < 41bp 1 0.0408104161649799 1 0.0707267820835114 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAT5A ENSG00000126561 CDS Human protein_coding chr17:40459614 chr17:40459629 synonymous SNV . 0 36 hm5C_associated_SNPs_12462 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831626 chr17:40459620-40459640
64251 chr17 40459668 40459668 1 + C A rs185687915 40459677 + 40459657 40459697 41 ATCAACAAGCCCGACGGGACCTTCTTGTTGCGCTTTAGTGA ATCAACAAGCCAGACGGGACCTTCTTGTTGCGCTTTAGTGA < 41bp 1 0.136709967509771 1 0.0378362834453583 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAT5A ENSG00000126561 CDS Human protein_coding chr17:40459677 chr17:40459668 synonymous SNV . 0 12 hm5C_associated_SNPs_12463 0 0 2 FXR2 POSTAR2 ENCODE chr17:40459650-40459692
64251 chr17 40714721 40714721 1 + C T rs145723983 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACTTCG < 41bp 1 0.505556060267929 1 0.255551010370255 experiment 0.988887879464141 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714721 synonymous SNV . 0 38 hm5C_associated_SNPs_12465 1 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr17 40716080 40716080 1 + C T rs143964295 40716079 + 40716059 40716099 41 TCCTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG TCCTTGACTTTTGATGTCATCTCCCTGCTGGACCCCTATGG < 41bp 1 0.459790470731259 1 0.54792445898056 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40716079 chr17:40716080 nonsynonymous SNV 0.990 2 22 hm5C_associated_SNPs_12466 0 0 14 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr17:40716055-40716085
64251 chr17 40765986 40765986 1 + C G rs147337786 40765994 + 40765974 40766014 41 CTTCCTCATGACCGGCTACACCCCTCTCACTACGGACCAGT CTTCCTCATGACGGGCTACACCCCTCTCACTACGGACCAGT < 41bp 1 0.230143116648463 1 0.0227575600147247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765994 chr17:40765986 synonymous SNV . 0 13 hm5C_associated_SNPs_12467 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:40765968-40766007
64251 chr17 40811347 40811347 1 + C G rs147092965 40811360 + 40811340 40811380 41 GGTTGGGCTCCCCGGCCCACCGGCCGAGGAGAGGCCTGCGC GGTTGGGGTCCCCGGCCCACCGGCCGAGGAGAGGCCTGCGC < 41bp 1 0.769327827184795 1 0.714184403419495 experiment 0.461344345630411 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TUBG2 ENSG00000037042 UTR5 Human protein_coding chr17:40811360 chr17:40811347 . . 0 8 hm5C_associated_SNPs_12468 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40811333-40811357
64251 chr17 40931092 40931092 1 + G A rs139710182 40931095 + 40931075 40931115 41 CAAGTTCTTCTAGCAGGGACCTGTCTCCCTTTACTTCTTAC CAAGTTCTTCTAGCAGGAACCTGTCTCCCTTTACTTCTTAC < 41bp 1 0.224083567518477 1 0.182038128376007 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931095 chr17:40931092 . . 0 18 hm5C_associated_SNPs_12471 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:40931059-40931110
64251 chr17 40985579 40985579 1 + C T rs11542143 40985592 + 40985572 40985612 41 TCAGGTCCCTCCGGCCCCCTCCCTGGAGTCCACAGCGCCTC TCAGGTCTCTCCGGCCCCCTCCCTGGAGTCCACAGCGCCTC < 41bp 1 0.504659312876743 1 0.189332008361816 experiment 0.990681374246514 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSME3 ENSG00000131467 UTR5 Human protein_coding chr17:40985592 chr17:40985579 . . 0 8 hm5C_associated_SNPs_12473 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:40985552-40985583
64251 chr17 41154748 41154748 1 + C A rs191256004 41154768 + 41154748 41154788 41 CCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAA ACTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAA < 41bp 1 0.269982286460596 1 0.43557271361351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154768 chr17:41154748 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_12474 0 0 41 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:41154680-41154760
64251 chr17 41348524 41348524 1 + C T rs368143342 41348532 + 41348512 41348552 41 ATGTCTCCTCTGCCACATGACAGTCCTTTAATAGAGAAGCC ATGTCTCCTCTGTCACATGACAGTCCTTTAATAGAGAAGCC < 41bp 1 0.150416758736768 1 0.190945446491241 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348532 chr17:41348524 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_12476 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41348510-41348530
64251 chr17 41477093 41477093 1 + A G rs115054688 41477110 + 41477090 41477130 41 CTTAGCTCACTATGGGGAACCACTTGACTGAGATGGCGCCC CTTGGCTCACTATGGGGAACCACTTGACTGAGATGGCGCCC < 41bp 1 0.412923219122731 1 0.188425570726395 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ARL4D ENSG00000175906 UTR5 Human protein_coding chr17:41477110 chr17:41477093 . . 0 4 hm5C_associated_SNPs_12477 0 0 1 EIF3D POSTAR2 ENCODE chr17:41477041-41477120
64251 chr17 42225446 42225446 1 + G A rs199910134 42225441 + 42225421 42225461 41 TCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGG TCCAGCACGCCCAGTGCTGACAGCCATCCATCATGCATAGG < 41bp 1 0.419294704791375 1 0.0438823103904724 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225441 chr17:42225446 nonsynonymous SNV 0.000 1 26 hm5C_associated_SNPs_12479 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr17 42225446 42225446 1 + G A rs199910134 42225444 + 42225424 42225464 41 AGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC AGCACGCCCAGTGCTGACAGCCATCCATCATGCATAGGAGC < 41bp 1 0.0226271948329916 1 0.39317786693573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225444 chr17:42225446 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_12480 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr17 42225451 42225451 1 + T G rs202187285 42225441 + 42225421 42225461 41 TCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGG TCCAGCACGCCCAGTGCTGACAGCCGTCCAGCATGCATAGG < 41bp 1 0.547813133575294 1 0.136227011680603 experiment 0.904373732849411 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225441 chr17:42225451 nonsynonymous SNV 0.001 0 31 hm5C_associated_SNPs_12481 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr17 42225451 42225451 1 + T G rs202187285 42225444 + 42225424 42225464 41 AGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC AGCACGCCCAGTGCTGACAGCCGTCCAGCATGCATAGGAGC < 41bp 1 0.045770295077473 1 0.335958391427994 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225444 chr17:42225451 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_12482 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr17 42264623 42264623 1 + A G rs367649898 42264626 + 42264606 42264646 41 TGTGACCCCCTTAGCCGACCCTACTCCTCACTGGCCGGGAC TGTGACCCCCTTAGCCGGCCCTACTCCTCACTGGCCGGGAC < 41bp 1 0.181378731337235 1 0.0664810538291931 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TMUB2 ENSG00000168591 UTR5 Human protein_coding chr17:42264626 chr17:42264623 . . 0 18 hm5C_associated_SNPs_12483 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:42264616-42264644
64251 chr17 42857538 42857538 1 + C T rs73984073 42857543 + 42857523 42857563 41 TGGGACCTAGGGGGACGGGGCTGACATCTACATTTTTTAAA TGGGACCTAGGGGGATGGGGCTGACATCTACATTTTTTAAA < 41bp 1 0.157146564475904 1 0.0360425710678101 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADAM11 ENSG00000073670 UTR3 Human protein_coding chr17:42857543 chr17:42857538 . . 0 16 hm5C_associated_SNPs_12491 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42857526-42857566
64251 chr17 43220908 43220908 1 + C A rs115456393 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCGTCCAGTGGCTATTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.409061864941208 1 0.856917500495911 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220908 nonsynonymous SNV 0.998 2 17 hm5C_associated_SNPs_12492 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr17 43220921 43220921 1 + C T rs35205304 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCGTCCAGTGGCTCTTCCGAATGTTTTGGACCCAAAAG < 41bp 1 0.349189381073358 1 0.786548495292664 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220921 nonsynonymous SNV 0.996 3 30 hm5C_associated_SNPs_12493 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:43220920-43220940
64251 chr17 43229247 43229247 1 + T C rs552757269 43229227 + 43229207 43229247 41 CCCTCCCATTAGGAAGCATGCTTTTGCAGTTAAATGGCGAT CCCTCCCATTAGGAAGCATGCTTTTGCAGTTAAATGGCGAC < 41bp 1 0.217686283980036 1 0.0440614819526672 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HEXIM1 ENSG00000224505 ncRNA_intronic Human antisense chr17:43229227 chr17:43229247 . . 0 41 hm5C_associated_SNPs_12494 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:43229238-43229265
64251 chr17 43317988 43317988 1 + C A rs146321570 43317975 + 43317955 43317995 41 TGGAGCACATGGAGGAACTGCAGGAGCAAGTGGCGCTGGTG TGGAGCACATGGAGGAACTGCAGGAGCAAGTGGAGCTGGTG < 41bp 1 0.688821175445931 1 0.55074542760849 experiment 0.622357649108138 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43317975 chr17:43317988 nonsynonymous SNV 0.290 2 34 hm5C_associated_SNPs_12496 0 0 2 DDX24 POSTAR2 ENCODE chr17:43317944-43318031
64251 chr17 45727506 45727506 1 + C T rs528396319 45727511 + 45727491 45727531 41 CCGCCCCCCACCCCACCCTCCCTTCCCACCCGACCCCCAAC CCGCCCCCCACCCCATCCTCCCTTCCCACCCGACCCCCAAC < 41bp 1 0.122302833410951 1 0.183113634586334 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNB1 ENSG00000108424 UTR5 Human protein_coding chr17:45727511 chr17:45727506 . . 0 16 hm5C_associated_SNPs_12499 0 0 3 METTL3 POSTAR2 GSE46705,GSM1135006 chr17:45727493-45727521
64251 chr17 45727506 45727506 1 + C T rs528396319 45727512 + 45727492 45727532 41 CGCCCCCCACCCCACCCTCCCTTCCCACCCGACCCCCAACC CGCCCCCCACCCCATCCTCCCTTCCCACCCGACCCCCAACC < 41bp 1 0.299966840701873 1 0.123752653598785 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient KPNB1 ENSG00000108424 UTR5 Human protein_coding chr17:45727512 chr17:45727506 . . 0 15 hm5C_associated_SNPs_12500 0 0 3 METTL3 POSTAR2 GSE46705,GSM1135006 chr17:45727493-45727521
64251 chr17 45773467 45773467 1 + C A rs145958867 45773473 + 45773453 45773493 41 GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGTTC GTGTGGGCCGCGGCACGGCCCTCACCATGGAGTCCATGTTC < 41bp 1 0.461692091810324 1 0.116081207990646 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBKBP1 ENSG00000198933 UTR5 Human protein_coding chr17:45773473 chr17:45773467 . . 0 15 hm5C_associated_SNPs_12501 0 0 6 DDX24 POSTAR2 ENCODE chr17:45773344-45773468
64251 chr17 45786519 45786519 1 + G A rs369896558 45786508 + 45786488 45786528 41 TGAGCTGGCGGAGGGCGCGGCCTACGCGGGCGCCTCCCCGC TGAGCTGGCGGAGGGCGCGGCCTACGCGGGCACCTCCCCGC < 41bp 1 0.113635194180924 1 0.195717841386795 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBKBP1 ENSG00000198933 CDS Human protein_coding chr17:45786508 chr17:45786519 nonsynonymous SNV 0.057 0 32 hm5C_associated_SNPs_12502 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:45786513-45786560
64251 chr17 46025299 46025299 1 + C T rs145323612 46025293 + 46025273 46025313 41 GCTGGGATTACAGACATGAGCCACCACGCTTGGCCGGGATA GCTGGGATTACAGACATGAGCCACCATGCTTGGCCGGGATA < 41bp 1 0.358260737587045 1 0.0738276243209839 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PNPO ENSG00000264019 ncRNA_exonic Human antisense chr17:46025293 chr17:46025299 . . 0 27 hm5C_associated_SNPs_12503 1 0 12 FUS POSTAR2 DRA001158,DRS012384 chr17:46025228-46025312
64251 chr17 46058901 46058901 1 + C T rs112342224 46058895 + 46058875 46058915 41 CCGTGTTCTTGCCTGCCCATCTTCTCCGCTTTTGGGATGAA CCGTGTTCTTGCCTGCCCATCTTCTCTGCTTTTGGGATGAA < 41bp 1 0.114564513849748 1 0.105311751365662 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK5RAP3 ENSG00000264701 ncRNA_intronic Human antisense chr17:46058895 chr17:46058901 . . 0 27 hm5C_associated_SNPs_12504 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46058868-46058936
64251 chr17 46058901 46058901 1 + C T rs112342224 46058898 + 46058878 46058918 41 TGTTCTTGCCTGCCCATCTTCTCCGCTTTTGGGATGAAGAT TGTTCTTGCCTGCCCATCTTCTCTGCTTTTGGGATGAAGAT < 41bp 1 0.312143268607708 1 0.245404005050659 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDK5RAP3 ENSG00000264701 ncRNA_intronic Human antisense chr17:46058898 chr17:46058901 . . 0 24 hm5C_associated_SNPs_12505 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46058868-46058936
64251 chr17 46136265 46136265 1 + C T rs574307293 46136252 + 46136232 46136272 41 CTCCTTTTCTGAGGAAGGTGCGGTTGGCTACAGCTCTGACT CTCCTTTTCTGAGGAAGGTGCGGTTGGCTACAGTTCTGACT < 41bp 1 0.174966498257504 1 0.154885411262512 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46136252 chr17:46136265 synonymous SNV . 0 34 hm5C_associated_SNPs_12506 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr17:46136239-46136283
64251 chr17 46199240 46199240 1 + C T rs182437136 46199224 + 46199204 46199244 41 CGTATGTGGCAAATTCTAAGCTGCCATATTGAACATCATCC CGTATGTGGCAAATTCTAAGCTGCCATATTGAACATTATCC < 41bp 1 0.419733036129102 1 0.124044448137283 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX11 ENSG00000002919 UTR3 Human protein_coding chr17:46199224 chr17:46199240 . . 0 37 hm5C_associated_SNPs_12508 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:46199234-46199261
64251 chr17 46940283 46940283 1 + T C rs34042259 46940294 + 46940274 46940314 41 GCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCC GCCCCTTTGCTTCAATTGTCCAATTTGTGACAAGATCTTCC < 41bp 1 0.132575809196279 1 0.187479794025421 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46940294 chr17:46940283 synonymous SNV . 0 10 hm5C_associated_SNPs_12511 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46940250-46940288
64251 chr17 46940600 46940600 1 + C T rs111623438 46940590 + 46940570 46940610 41 TTTAAGTCGCATAACTCTAGCTGTATCATCCTCTCACCTGT TTTAAGTCGCATAACTCTAGCTGTATCATCTTCTCACCTGT < 41bp 1 0.67244268309204 1 0.161437928676605 experiment 0.655114633815919 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALCOCO2 ENSG00000136436 UTR3 Human protein_coding chr17:46940590 chr17:46940600 . . 0 31 hm5C_associated_SNPs_12512 0 0 11 PTBP1 POSTAR2 GSE19323,GSM480479 chr17:46940580-46940600
64251 chr17 47128779 47128779 1 + A T rs62078409 47128775 + 47128755 47128795 41 AGGCCCAGGTTTGAGAGAGCCCAGAGGGGCAGAGCCCAGAG AGGCCCAGGTTTGAGAGAGCCCAGTGGGGCAGAGCCCAGAG < 41bp 1 0.65042007673725 1 0.348322570323944 experiment 0.6991598465255 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47128775 chr17:47128779 . . 0 25 hm5C_associated_SNPs_12513 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:47128662-47128801
64251 chr17 47128779 47128779 1 + A T rs62078409 47128784 + 47128764 47128804 41 TTTGAGAGAGCCCAGAGGGGCAGAGCCCAGAGCCTTGTTTG TTTGAGAGAGCCCAGTGGGGCAGAGCCCAGAGCCTTGTTTG < 41bp 1 0.678257546592834 1 0.518402516841888 experiment 0.643484906814331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47128784 chr17:47128779 . . 0 16 hm5C_associated_SNPs_12514 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:47128662-47128801
64251 chr17 47128788 47128788 1 + G T rs145969585 47128784 + 47128764 47128804 41 TTTGAGAGAGCCCAGAGGGGCAGAGCCCAGAGCCTTGTTTG TTTGAGAGAGCCCAGAGGGGCAGATCCCAGAGCCTTGTTTG < 41bp 1 0.451083736500652 1 0.388192176818848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47128784 chr17:47128788 . . 0 25 hm5C_associated_SNPs_12515 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:47128662-47128801
64251 chr17 47129814 47129814 1 + C T rs576842135 47129826 + 47129806 47129846 41 TCCTTTTCCGTTGGCTGATTCAGCTCCCAGAAGAGACGAGG TCCTTTTCTGTTGGCTGATTCAGCTCCCAGAAGAGACGAGG < 41bp 1 0.293755108125285 1 0.843390345573425 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47129826 chr17:47129814 . . 0 9 hm5C_associated_SNPs_12516 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:47129784-47129903
64251 chr17 47132179 47132179 1 + A G rs147682856 47132163 + 47132143 47132183 41 ATCCTACACCTCCATTGGGCCCTTTTTCAGTCTTCAATGGG ATCCTACACCTCCATTGGGCCCTTTTTCAGTCTTCAGTGGG < 41bp 1 0.017830194030932 1 0.0129223763942719 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47132163 chr17:47132179 . . 0 37 hm5C_associated_SNPs_12517 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:47132141-47132181
64251 chr17 47132179 47132179 1 + A G rs147682856 47132188 + 47132168 47132208 41 TTCAGTCTTCAATGGGGGCCCAGTTGGCTCTAGAAGGAGAA TTCAGTCTTCAGTGGGGGCCCAGTTGGCTCTAGAAGGAGAA < 41bp 1 0.235773540437567 1 0.283973813056946 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control IGF2BP1 ENSG00000159217 UTR3 Human protein_coding chr17:47132188 chr17:47132179 . . 0 12 hm5C_associated_SNPs_12518 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:47132141-47132181
64251 chr17 47904783 47904783 1 + A G rs147612239 47904766 + 47904746 47904786 41 CCATTGTTCTCCCTCAGGACCTGATTGATGAGTGGATAGCC CCATTGTTCTCCCTCAGGACCTGATTGATGAGTGGATGGCC < 41bp 1 0.22102546280226 1 0.0300179123878479 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KAT7 ENSG00000136504 CDS Human protein_coding chr17:47904766 chr17:47904783 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_12519 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47904759-47904795
64251 chr17 48165713 48165713 1 + C G rs187586850 48165705 + 48165685 48165725 41 ACCGACGACTACTGAGGGGGCAGCCCCCCGCCCCCGGCCCA ACCGACGACTACTGAGGGGGCAGCCCCCGGCCCCCGGCCCA < 41bp 1 0.352775445397452 1 0.275190532207489 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165705 chr17:48165713 . . 0 29 hm5C_associated_SNPs_12521 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165713 48165713 1 + C G rs187586850 48165715 + 48165695 48165735 41 ACTGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAAC ACTGAGGGGGCAGCCCCCGGCCCCCGGCCCACCTGGGTAAC < 41bp 1 0.209859152360323 1 0.196139544248581 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165715 chr17:48165713 . . 0 19 hm5C_associated_SNPs_12522 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165713 48165713 1 + C G rs187586850 48165716 + 48165696 48165736 41 CTGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACA CTGAGGGGGCAGCCCCCGGCCCCCGGCCCACCTGGGTAACA < 41bp 1 0.278946430065774 1 0.118668645620346 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165716 chr17:48165713 . . 0 18 hm5C_associated_SNPs_12523 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165713 48165713 1 + C G rs187586850 48165717 + 48165697 48165737 41 TGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACAC TGAGGGGGCAGCCCCCGGCCCCCGGCCCACCTGGGTAACAC < 41bp 1 0.399316010869842 1 0.107278019189835 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165717 chr17:48165713 . . 0 17 hm5C_associated_SNPs_12524 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165713 48165713 1 + C G rs187586850 48165718 + 48165698 48165738 41 GAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACACG GAGGGGGCAGCCCCCGGCCCCCGGCCCACCTGGGTAACACG < 41bp 1 0.167030193916403 1 0.259819835424423 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165718 chr17:48165713 . . 0 16 hm5C_associated_SNPs_12525 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165713 48165713 1 + C G rs187586850 48165719 + 48165699 48165739 41 AGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACACGG AGGGGGCAGCCCCCGGCCCCCGGCCCACCTGGGTAACACGG < 41bp 1 0.36413980329735 1 0.808478713035583 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165719 chr17:48165713 . . 0 15 hm5C_associated_SNPs_12526 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165705 + 48165685 48165725 41 ACCGACGACTACTGAGGGGGCAGCCCCCCGCCCCCGGCCCA ACCGACGACTACTGAGGGGGCAGCCCCCCGCCCCCAGCCCA < 41bp 1 0.308478850792528 1 0.37536546587944 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165705 chr17:48165720 . . 0 36 hm5C_associated_SNPs_12527 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165715 + 48165695 48165735 41 ACTGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAAC ACTGAGGGGGCAGCCCCCCGCCCCCAGCCCACCTGGGTAAC < 41bp 1 0.205398342768339 1 0.28998327255249 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165715 chr17:48165720 . . 0 26 hm5C_associated_SNPs_12528 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165716 + 48165696 48165736 41 CTGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACA CTGAGGGGGCAGCCCCCCGCCCCCAGCCCACCTGGGTAACA < 41bp 1 0.395038255975863 1 0.181744158267975 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165716 chr17:48165720 . . 0 25 hm5C_associated_SNPs_12529 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165717 + 48165697 48165737 41 TGAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACAC TGAGGGGGCAGCCCCCCGCCCCCAGCCCACCTGGGTAACAC < 41bp 1 0.214363814719171 1 0.139705985784531 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165717 chr17:48165720 . . 0 24 hm5C_associated_SNPs_12530 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165718 + 48165698 48165738 41 GAGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACACG GAGGGGGCAGCCCCCCGCCCCCAGCCCACCTGGGTAACACG < 41bp 1 0.0842942134315326 1 0.124434351921082 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165718 chr17:48165720 . . 0 23 hm5C_associated_SNPs_12531 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48165720 48165720 1 + G A rs140614661 48165719 + 48165699 48165739 41 AGGGGGCAGCCCCCCGCCCCCGGCCCACCTGGGTAACACGG AGGGGGCAGCCCCCCGCCCCCAGCCCACCTGGGTAACACGG < 41bp 1 0.325604499575811 1 0.791081368923187 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48165719 chr17:48165720 . . 0 22 hm5C_associated_SNPs_12532 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48165691-48165728
64251 chr17 48167160 48167160 1 + T C rs184580419 48167150 + 48167130 48167170 41 ATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTGTCTACGGG ATGCCAGAGAGGTGGGGATCCTGCCTAAGGCTGTCTACGGG < 41bp 1 0.65338185152486 1 0.698398470878601 experiment 0.693236296950281 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITGA3 ENSG00000005884 UTR3 Human protein_coding chr17:48167150 chr17:48167160 . . 0 31 hm5C_associated_SNPs_12533 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48167159-48167196
64251 chr17 48185715 48185715 1 + G C rs576054151 48185696 + 48185676 48185716 41 TCCGCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGAGT TCCGCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGACT < 41bp 1 0.367897778538396 1 0.135297745466232 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK2 ENSG00000005882 CDS Human protein_coding chr17:48185696 chr17:48185715 nonsynonymous SNV 0.965 0 40 hm5C_associated_SNPs_12534 0 0 2 BUD13 POSTAR2 ENCODE chr17:48185657-48185719
64251 chr17 48185715 48185715 1 + G C rs576054151 48185699 + 48185679 48185719 41 GCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGAGTCCA GCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGACTCCA < 41bp 1 0.423454794854848 1 0.326108455657959 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK2 ENSG00000005882 CDS Human protein_coding chr17:48185699 chr17:48185715 nonsynonymous SNV 0.965 0 37 hm5C_associated_SNPs_12535 0 0 2 BUD13 POSTAR2 ENCODE chr17:48185657-48185719
64251 chr17 48556225 48556225 1 + C T rs555529887 48556227 + 48556207 48556247 41 CTCCTGCTCGGGTCAGTGCGCCGCGCTGCGCTGGGCGCCAT CTCCTGCTCGGGTCAGTGTGCCGCGCTGCGCTGGGCGCCAT < 41bp 1 0.748742819631022 1 0.836164832115173 experiment 0.502514360737955 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSAD1 ENSG00000136444 UTR5 Human protein_coding chr17:48556227 chr17:48556225 . . 0 19 hm5C_associated_SNPs_12536 0 0 5 DDX3X POSTAR2 ENCODE chr17:48556210-48556368
64251 chr17 48556225 48556225 1 + C T rs555529887 48556230 + 48556210 48556250 41 CTGCTCGGGTCAGTGCGCCGCGCTGCGCTGGGCGCCATGGC CTGCTCGGGTCAGTGTGCCGCGCTGCGCTGGGCGCCATGGC < 41bp 1 0.622866422260161 1 0.339662045240402 experiment 0.754267155479678 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RSAD1 ENSG00000136444 UTR5 Human protein_coding chr17:48556230 chr17:48556225 . . 0 16 hm5C_associated_SNPs_12537 0 0 5 DDX3X POSTAR2 ENCODE chr17:48556210-48556368
64251 chr17 48631733 48631733 1 + C T rs147637130 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCGCCTTTTCTGAGCGCATGCGTCG < 41bp 1 0.0576084592614221 1 0.0201388597488403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631733 synonymous SNV . 0 27 hm5C_associated_SNPs_12540 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr17 48696111 48696111 1 + G T rs201895309 48696108 + 48696088 48696128 41 TTCGTGCTGACGGCCCAGTTCGTGCTAGTCAACGTGGTGAT TTCGTGCTGACGGCCCAGTTCGTTCTAGTCAACGTGGTGAT < 41bp 1 0.213803174664554 1 0.0886621475219727 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48696108 chr17:48696111 synonymous SNV . 0 24 hm5C_associated_SNPs_12541 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:48696091-48696121
64251 chr17 49239140 49239140 1 + C T rs566810694 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGTTTGT < 41bp 1 0.411978017994793 1 0.3665452003479 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239140 synonymous SNV . 0 37 hm5C_associated_SNPs_12542 0 0 39 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr17 49239201 49239201 1 + G C rs189685744 49239220 + 49239200 49239240 41 TGAATGACAGGAGGGCAGACCACATTGCTTTTCACATCCAT TCAATGACAGGAGGGCAGACCACATTGCTTTTCACATCCAT < 41bp 1 0.35880456479929 1 0.400739967823029 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NME1 ENSG00000239672 CDS Human protein_coding chr17:49239220 chr17:49239201 nonsynonymous SNV 0.990 0 2 hm5C_associated_SNPs_12543 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr17 49245701 49245701 1 + C T rs530546146 49245691 + 49245671 49245711 41 GAAGTACATGAACTCAGGGCCGGTTGTGGCCATGGTGAGTG GAAGTACATGAACTCAGGGCCGGTTGTGGCTATGGTGAGTG < 41bp 1 0.31008683801423 1 0.154196739196777 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49245691 chr17:49245701 synonymous SNV . 0 31 hm5C_associated_SNPs_12544 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:49245680-49245704
64251 chr17 49248866 49248866 1 + T C rs148956596 49248851 + 49248831 49248871 41 ATTGTTTTCTTTCTTAGGAACATCATTCATGGCAGTGATTC ATTGTTTTCTTTCTTAGGAACATCATTCATGGCAGCGATTC < 41bp 1 0.245733870603354 1 0.031509667634964 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49248851 chr17:49248866 stoploss 0.994 0 36 hm5C_associated_SNPs_12545 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:49248860-49248880
64251 chr17 49248866 49248866 1 + T C rs148956596 49248854 + 49248834 49248874 41 GTTTTCTTTCTTAGGAACATCATTCATGGCAGTGATTCAGT GTTTTCTTTCTTAGGAACATCATTCATGGCAGCGATTCAGT < 41bp 1 0.02923486397568 1 0.113658905029297 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49248854 chr17:49248866 stoploss 0.994 0 33 hm5C_associated_SNPs_12546 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:49248860-49248880
64251 chr17 53844742 53844742 1 + G A rs112454522 53844740 + 53844720 53844760 41 GTCTTTGGTGTTCTGGAGGACTGCTCACCAACTCTACTGGC GTCTTTGGTGTTCTGGAGGACTACTCACCAACTCTACTGGC < 41bp 1 0.250856087538885 1 0.0653965175151825 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53844740 chr17:53844742 nonsynonymous SNV 0.008 4 23 hm5C_associated_SNPs_12548 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:53844734-53844758
64251 chr17 53852178 53852178 1 + G A rs79806530 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTCGATAACCCAGGTGGCCAAATTCCGTCCTGGCTCATT < 41bp 1 0.265355306488145 1 0.194811552762985 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852178 synonymous SNV . 0 14 hm5C_associated_SNPs_12549 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:53852170-53852193
64251 chr17 55191921 55191921 1 + G A rs73317574 55191920 + 55191900 55191940 41 CACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGC CACACACCCTACCTTCCACGCACTGCGCAGCCTCGACCAGC < 41bp 1 0.218980705267286 1 0.0294417142868042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191920 chr17:55191921 synonymous SNV . 0 22 hm5C_associated_SNPs_12555 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:55191897-55191924
64251 chr17 55194242 55194242 1 + G A rs116339701 55194240 + 55194220 55194260 41 GGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTC GGTCTGACTTTGTCACCCTGCCATTTCAGGGAGCAGAAGTC < 41bp 1 0.0315232068061885 1 0.0598895847797394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194240 chr17:55194242 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_12556 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194242 55194242 1 + G A rs116339701 55194241 + 55194221 55194261 41 GTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCC GTCTGACTTTGTCACCCTGCCATTTCAGGGAGCAGAAGTCC < 41bp 1 0.0417497210381503 1 0.0501104593276978 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194241 chr17:55194242 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_12557 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194242 55194242 1 + G A rs116339701 55194253 + 55194233 55194273 41 CACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTG CACCCTGCCATTTCAGGGAGCAGAAGTCCTTCTGGACAGTG < 41bp 1 0.449359310618953 1 0.416833430528641 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194253 chr17:55194242 nonsynonymous SNV . 0 10 hm5C_associated_SNPs_12558 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 57280100 57280100 1 + G A rs9908279 57280106 + 57280086 57280126 41 ATATTTTCGACAATGCCTTGCCAAGGAATCTCTGAAGTCCA ATATTTTCGACAATACCTTGCCAAGGAATCTCTGAAGTCCA < 41bp 1 0.10439174261717 1 0.0754818022251129 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRR11 ENSG00000265415 ncRNA_exonic Human antisense chr17:57280106 chr17:57280100 . . 0 15 hm5C_associated_SNPs_12559 0 0 11 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:57280060-57280100
64251 chr17 57280881 57280881 1 + C T rs188344787 57280865 + 57280845 57280885 41 CAAAGTGCTGAGATTACAGGCGTGAGCCACCACGCCCGGCC CAAAGTGCTGAGATTACAGGCGTGAGCCACCACGCCTGGCC < 41bp 1 0.685845074815836 1 0.529391050338745 experiment 0.628309850368328 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRR11 ENSG00000265415 ncRNA_intronic Human antisense chr17:57280865 chr17:57280881 . . 0 37 hm5C_associated_SNPs_12560 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr17:57280880-57280900
64251 chr17 57280882 57280882 1 + G A rs192983561 57280865 + 57280845 57280885 41 CAAAGTGCTGAGATTACAGGCGTGAGCCACCACGCCCGGCC CAAAGTGCTGAGATTACAGGCGTGAGCCACCACGCCCAGCC < 41bp 1 0.715003031163353 1 0.432442098855972 experiment 0.569993937673293 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRR11 ENSG00000265415 ncRNA_intronic Human antisense chr17:57280865 chr17:57280882 . . 0 38 hm5C_associated_SNPs_12561 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr17:57280880-57280900
64251 chr17 58863616 58863616 1 + G A rs151121462 58863624 + 58863604 58863644 41 TCAGTTGGTAGAGCATCAGACTTAATCAGAGGGTCCAGGGT TCAGTTGGTAGAACATCAGACTTAATCAGAGGGTCCAGGGT < 41bp 1 0.0518071328597355 1 0.0525857210159302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BCAS3 ENSG00000141376 intronic Human protein_coding chr17:58863624 chr17:58863616 . . 0 13 hm5C_associated_SNPs_12563 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:58863546-58863620
64251 chr17 61627965 61627965 1 + T C rs530493288 61627962 + 61627942 61627982 41 CTCCTCTCCTCCCTTCGGACCCATAGATCTCAGGCTCGGCT CTCCTCTCCTCCCTTCGGACCCACAGATCTCAGGCTCGGCT < 41bp 1 0.343430047983185 1 0.0218279659748077 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF7 ENSG00000136485 UTR5 Human protein_coding chr17:61627962 chr17:61627965 . . 0 24 hm5C_associated_SNPs_12569 0 0 11 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:61627919-61627987
64251 chr17 61627979 61627979 1 + G C rs550188568 61627962 + 61627942 61627982 41 CTCCTCTCCTCCCTTCGGACCCATAGATCTCAGGCTCGGCT CTCCTCTCCTCCCTTCGGACCCATAGATCTCAGGCTCCGCT < 41bp 1 0.246078511038596 1 0.0307924449443817 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF7 ENSG00000136485 UTR5 Human protein_coding chr17:61627962 chr17:61627979 . . 0 38 hm5C_associated_SNPs_12570 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:61627919-61627987
64251 chr17 61627982 61627982 1 + T C rs567134371 61627962 + 61627942 61627982 41 CTCCTCTCCTCCCTTCGGACCCATAGATCTCAGGCTCGGCT CTCCTCTCCTCCCTTCGGACCCATAGATCTCAGGCTCGGCC < 41bp 1 0.251672000712639 1 0.044093906879425 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF7 ENSG00000136485 UTR5 Human protein_coding chr17:61627962 chr17:61627982 . . 0 41 hm5C_associated_SNPs_12571 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:61627919-61627987
64251 chr17 61666835 61666835 1 + T C rs189505261 61666850 + 61666830 61666870 41 TTGTGTTGAGGAGCAGTTCACGCACTGGCTGTGTCTATTCC TTGTGCTGAGGAGCAGTTCACGCACTGGCTGTGTCTATTCC < 41bp 1 0.358025634757008 1 0.0838854312896729 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF7 ENSG00000136485 UTR3 Human protein_coding chr17:61666850 chr17:61666835 . . 0 6 hm5C_associated_SNPs_12572 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:61666758-61666866
64251 chr17 61668430 61668430 1 + A C rs574714543 61668449 + 61668429 61668469 41 CAAAGCGAGCAGTTCTTGGTCAGAACCCTCCTCTGCTTTTC CCAAGCGAGCAGTTCTTGGTCAGAACCCTCCTCTGCTTTTC < 41bp 1 0.701378781168731 1 0.503523230552673 experiment 0.597242437662538 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF7 ENSG00000136485 UTR3 Human protein_coding chr17:61668449 chr17:61668430 . . 0 2 hm5C_associated_SNPs_12573 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:61668397-61668438
64251 chr17 61909382 61909382 1 + C A rs115733234 61909374 + 61909354 61909394 41 TCCAATAAAGCTCTGTGGGCCAAGTCCTCTAGGACTCCAGT TCCAATAAAGCTCTGTGGGCCAAGTCCTATAGGACTCCAGT < 41bp 1 0.502372969596419 1 0.407424449920654 experiment 0.995254060807162 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC5 ENSG00000087191;ENSG00000108604 downstream Human other chr17:61909374 chr17:61909382 . . 0 29 hm5C_associated_SNPs_12574 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:61909301-61909436
64251 chr17 62223740 62223740 1 + G A rs142175716 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGA < 41bp 1 0.582757941300896 1 0.564111411571503 experiment 0.834484117398208 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223740 . . 0 41 hm5C_associated_SNPs_12575 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223740 62223740 1 + G A rs142175716 62223727 + 62223707 62223747 41 TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGAGGGTCAA < 41bp 1 0.228031434458722 1 0.304012060165405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223727 chr17:62223740 . . 0 34 hm5C_associated_SNPs_12576 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223740 62223740 1 + G A rs142175716 62223728 + 62223708 62223748 41 TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGAGGGTCAAT < 41bp 1 0.636040778513472 1 0.16831910610199 experiment 0.727918442973055 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223728 chr17:62223740 . . 0 33 hm5C_associated_SNPs_12577 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223740 62223740 1 + G A rs142175716 62223735 + 62223715 62223755 41 CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC CCCGCCGAGCTTCCTCGTGGCGCCGAGGGTCAATCTGCAGC < 41bp 1 0.579136773955022 1 0.0774265229701996 experiment 0.841726452089956 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223735 chr17:62223740 . . 0 26 hm5C_associated_SNPs_12578 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223740 62223740 1 + G A rs142175716 62223745 + 62223725 62223765 41 TTCCTCGTGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT TTCCTCGTGGCGCCGAGGGTCAATCTGCAGCGCTAGAGCAT < 41bp 1 0.209609829415807 1 0.0469182431697845 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223745 chr17:62223740 . . 0 16 hm5C_associated_SNPs_12579 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223750 62223750 1 + T G rs554830608 62223735 + 62223715 62223755 41 CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCGGCAGC < 41bp 1 0.681650411269548 1 0.120034992694855 experiment 0.636699177460904 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223735 chr17:62223750 . . 0 36 hm5C_associated_SNPs_12580 0 0 37 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223750 62223750 1 + T G rs554830608 62223745 + 62223725 62223765 41 TTCCTCGTGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT TTCCTCGTGGCGCCGGGGGTCAATCGGCAGCGCTAGAGCAT < 41bp 1 0.262570863190749 1 0.237588882446289 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223745 chr17:62223750 . . 0 26 hm5C_associated_SNPs_12581 0 0 37 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223750 62223750 1 + T G rs554830608 62223763 + 62223743 62223783 41 GTCAATCTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGG GTCAATCGGCAGCGCTAGAGCATGTGCTTGCGCATAACTGG < 41bp 1 0.619562610694655 1 0.483423382043839 experiment 0.76087477861069 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223763 chr17:62223750 . . 0 8 hm5C_associated_SNPs_12582 0 0 37 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223750 62223750 1 + T G rs554830608 62223769 + 62223749 62223789 41 CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC CGGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC < 41bp 1 0.326904512602687 1 0.137423753738403 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223769 chr17:62223750 . . 0 2 hm5C_associated_SNPs_12583 0 0 37 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 64783081 64783081 1 + G A rs6504459 64783073 + 64783053 64783093 41 AAAATCCTTGTCCAAGGAGGCTGTTTCTGTCTGCAAAGGAG AAAATCCTTGTCCAAGGAGGCTGTTTCTATCTGCAAAGGAG < 41bp 1 0.04058404798873 1 0.139999061822891 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64783073 chr17:64783081 nonsynonymous SNV 0.975 0 29 hm5C_associated_SNPs_12586 0 0 2 GRWD1 POSTAR2 ENCODE chr17:64783028-64783093
64251 chr17 65736812 65736812 1 + C T rs150579812 65736825 + 65736805 65736845 41 TATAGTTCCTTGTCTTTGGACATGTAAGAATTGGAGGCAAA TATAGTTTCTTGTCTTTGGACATGTAAGAATTGGAGGCAAA < 41bp 1 0.068259202457489 1 0.087387889623642 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA38B ENSG00000200394 ncRNA_exonic Human snoRNA chr17:65736825 chr17:65736812 . . 0 8 hm5C_associated_SNPs_12588 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:65736780-65736840
64251 chr17 65822320 65822320 1 + C G rs73351760 65822304 + 65822284 65822324 41 GGACGGCGACGCCGAGGAGACCCAGGATTCTGAGGACGACG GGACGGCGACGCCGAGGAGACCCAGGATTCTGAGGAGGACG < 41bp 1 0.288079240020148 1 0.0704384446144104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822304 chr17:65822320 nonsynonymous SNV 0.999 0 37 hm5C_associated_SNPs_12589 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822320 65822320 1 + C G rs73351760 65822305 + 65822285 65822325 41 GACGGCGACGCCGAGGAGACCCAGGATTCTGAGGACGACGA GACGGCGACGCCGAGGAGACCCAGGATTCTGAGGAGGACGA < 41bp 1 0.39035133386491 1 0.347697913646698 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822305 chr17:65822320 nonsynonymous SNV 0.999 0 36 hm5C_associated_SNPs_12590 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822320 65822320 1 + C G rs73351760 65822313 + 65822293 65822333 41 CGCCGAGGAGACCCAGGATTCTGAGGACGACGAGGAGGATG CGCCGAGGAGACCCAGGATTCTGAGGAGGACGAGGAGGATG < 41bp 1 0.739060227956081 1 0.713348031044006 experiment 0.521879544087839 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822313 chr17:65822320 nonsynonymous SNV 0.999 0 28 hm5C_associated_SNPs_12591 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822320 65822320 1 + C G rs73351760 65822323 + 65822303 65822343 41 ACCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGAAGA ACCCAGGATTCTGAGGAGGACGAGGAGGATGAGATGGAAGA < 41bp 1 0.568946443594201 1 0.699171245098114 experiment 0.862107112811598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822323 chr17:65822320 nonsynonymous SNV 0.999 0 18 hm5C_associated_SNPs_12592 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 66038264 66038264 1 + G A rs202246339 66038276 + 66038256 66038296 41 TTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTG TTGATTCCAAAATTTGTGTCCTTCTTGGGCAGAACTGATTG < 41bp 1 0.188898899771676 1 0.0809124708175659 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66038276 chr17:66038264 synonymous SNV . 0 9 hm5C_associated_SNPs_12593 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66038202-66038296
64251 chr17 66251941 66251941 1 + G A rs573816812 66251944 + 66251924 66251964 41 GGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCT GGAAGAAGCTGACCGGCACCCTCTAAACCTTTGCCCTATCT < 41bp 1 0.763090697266006 1 0.832728326320648 experiment 0.473818605467988 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66251944 chr17:66251941 nonsynonymous SNV 0.986 3 18 hm5C_associated_SNPs_12594 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:66251911-66251955
64251 chr17 66527460 66527460 1 + G A rs8082254 66527459 + 66527439 66527479 41 TCTTGGTTGTTAATTTAGAGCGTTTGGTTAAAGTATGTCCT TCTTGGTTGTTAATTTAGAGCATTTGGTTAAAGTATGTCCT < 41bp 1 0.0482442908721762 1 0.0642389357089996 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527459 chr17:66527460 . . 0 22 hm5C_associated_SNPs_12595 2 0 27 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:66527384-66527481
64251 chr17 66527802 66527802 1 + T A rs8905 66527809 + 66527789 66527829 41 AAGGCTATCCTGCTGAAAGTCCTGCTTTCCTATCTAGCATT AAGGCTATCCTGCAGAAAGTCCTGCTTTCCTATCTAGCATT < 41bp 1 0.104457204294905 1 0.049899697303772 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527809 chr17:66527802 . . 0 14 hm5C_associated_SNPs_12596 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527802 66527802 1 + T A rs8905 66527810 + 66527790 66527830 41 AGGCTATCCTGCTGAAAGTCCTGCTTTCCTATCTAGCATTT AGGCTATCCTGCAGAAAGTCCTGCTTTCCTATCTAGCATTT < 41bp 1 0.403204580029331 1 0.066148966550827 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527810 chr17:66527802 . . 0 13 hm5C_associated_SNPs_12597 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527802 66527802 1 + T A rs8905 66527813 + 66527793 66527833 41 CTATCCTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATT CTATCCTGCAGAAAGTCCTGCTTTCCTATCTAGCATTTATT < 41bp 1 0.0111947816061467 1 0.035890519618988 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527813 chr17:66527802 . . 0 10 hm5C_associated_SNPs_12598 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527802 66527802 1 + T A rs8905 66527817 + 66527797 66527837 41 CCTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTC CCTGCAGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTC < 41bp 1 0.0597860929580145 1 0.0829612612724304 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527817 chr17:66527802 . . 0 6 hm5C_associated_SNPs_12599 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527802 66527802 1 + T A rs8905 66527818 + 66527798 66527838 41 CTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCT CTGCAGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCT < 41bp 1 0.120289650042029 1 0.291931480169296 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527818 chr17:66527802 . . 0 5 hm5C_associated_SNPs_12600 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527802 66527802 1 + T A rs8905 66527822 + 66527802 66527842 41 TGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCTGGCA AGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCTGGCA < 41bp 1 0.330707451434861 1 0.345486104488373 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527822 chr17:66527802 . . 0 1 hm5C_associated_SNPs_12601 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:66527584-66527819
64251 chr17 66527834 66527834 1 + T C rs9925 66527817 + 66527797 66527837 41 CCTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTC CCTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTCCTC < 41bp 1 0.0642365032873785 1 0.0381206572055817 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527817 chr17:66527834 . . 0 38 hm5C_associated_SNPs_12602 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527818 + 66527798 66527838 41 CTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCT CTGCTGAAAGTCCTGCTTTCCTATCTAGCATTTATTCCTCT < 41bp 1 0.118660467085364 1 0.258398205041885 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527818 chr17:66527834 . . 0 37 hm5C_associated_SNPs_12603 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527822 + 66527802 66527842 41 TGAAAGTCCTGCTTTCCTATCTAGCATTTATTTCTCTGGCA TGAAAGTCCTGCTTTCCTATCTAGCATTTATTCCTCTGGCA < 41bp 1 0.322419978841385 1 0.214265257120132 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527822 chr17:66527834 . . 0 33 hm5C_associated_SNPs_12604 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527826 + 66527806 66527846 41 AGTCCTGCTTTCCTATCTAGCATTTATTTCTCTGGCAAACT AGTCCTGCTTTCCTATCTAGCATTTATTCCTCTGGCAAACT < 41bp 1 0.053540750520773 1 0.0245177447795868 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527826 chr17:66527834 . . 0 29 hm5C_associated_SNPs_12605 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527835 + 66527815 66527855 41 TTCCTATCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCT TTCCTATCTAGCATTTATTCCTCTGGCAAACTTTTCTTTCT < 41bp 1 0.260061758527175 1 0.29530268907547 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527835 chr17:66527834 . . 0 20 hm5C_associated_SNPs_12606 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527837 + 66527817 66527857 41 CCTATCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCTTT CCTATCTAGCATTTATTCCTCTGGCAAACTTTTCTTTCTTT < 41bp 1 0.384637624744771 1 0.744376182556152 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527837 chr17:66527834 . . 0 18 hm5C_associated_SNPs_12607 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527834 66527834 1 + T C rs9925 66527841 + 66527821 66527861 41 TCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCTTTTCTT TCTAGCATTTATTCCTCTGGCAAACTTTTCTTTCTTTTCTT < 41bp 1 0.161435947819117 1 0.346236884593964 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527841 chr17:66527834 . . 0 14 hm5C_associated_SNPs_12608 2 0 33 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527849 66527849 1 + T C rs574960815 66527835 + 66527815 66527855 41 TTCCTATCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCT TTCCTATCTAGCATTTATTTCTCTGGCAAACTTTCCTTTCT < 41bp 1 0.309733553242066 1 0.387093931436539 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527835 chr17:66527849 . . 0 35 hm5C_associated_SNPs_12609 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527849 66527849 1 + T C rs574960815 66527837 + 66527817 66527857 41 CCTATCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCTTT CCTATCTAGCATTTATTTCTCTGGCAAACTTTCCTTTCTTT < 41bp 1 0.486532987870751 1 0.68550056219101 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527837 chr17:66527849 . . 0 33 hm5C_associated_SNPs_12610 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 66527849 66527849 1 + T C rs574960815 66527841 + 66527821 66527861 41 TCTAGCATTTATTTCTCTGGCAAACTTTTCTTTCTTTTCTT TCTAGCATTTATTTCTCTGGCAAACTTTCCTTTCTTTTCTT < 41bp 1 0.162614698060174 1 0.408770382404327 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PRKAR1A ENSG00000108946 UTR3 Human protein_coding chr17:66527841 chr17:66527849 . . 0 29 hm5C_associated_SNPs_12611 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:66527647-66528359
64251 chr17 71203668 71203668 1 - T G rs565823973 71203687 - 71203667 71203707 41 CAATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACCCTAC CAATGATAGTGCCGGGTTGGCAGTTAACTCTTTCACCCTCC < 41bp 1 0.68817473377463 1 0.36156901717186 experiment 0.62365053245074 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM104A ENSG00000133193;ENSG00000166685 UTR3 Human other chr17:71203687 chr17:71203668 . . 0 40 hm5C_associated_SNPs_12612 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:71203622-71203690
64251 chr17 71232510 71232510 1 + G A rs115090235 71232491 + 71232471 71232511 41 ATGAGCTCATTAGGTAAAATCCAAGTCATGGAGAAACAAGA ATGAGCTCATTAGGTAAAATCCAAGTCATGGAGAAACAAAA < 41bp 1 0.186581612457784 1 0.232911616563797 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232491 chr17:71232510 nonsynonymous SNV 0.305 1 40 hm5C_associated_SNPs_12613 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:71232500-71232529
64251 chr17 71233118 71233118 1 + G A rs117209041 71233112 + 71233092 71233132 41 AAGCCACAACTTATCAGTCCCCAGGGGGAAAGACTCTCACA AAGCCACAACTTATCAGTCCCCAGGGAGAAAGACTCTCACA < 41bp 1 0.509085746593092 1 0.548308730125427 experiment 0.981828506813816 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71233112 chr17:71233118 synonymous SNV . 0 27 hm5C_associated_SNPs_12614 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:71233094-71233122
64251 chr17 71239087 71239087 1 + G A rs1566290 71239105 + 71239085 71239125 41 ACGATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG ACAATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG < 41bp 1 0.371387940594556 1 0.026333749294281 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71239105 chr17:71239087 synonymous SNV . 0 3 hm5C_associated_SNPs_12616 0 0 2 PPIG POSTAR2 ENCODE chr17:71239026-71239127
64251 chr17 72199826 72199826 1 + C T rs576043787 72199841 + 72199821 72199861 41 TTCGTCCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCT TTCGTTCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCT < 41bp 1 0.278890648867617 1 0.22856816649437 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199841 chr17:72199826 . . 0 6 hm5C_associated_SNPs_12617 0 0 70 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:72199800-72199840
64251 chr17 72199834 72199834 1 + C G rs76291586 72199841 + 72199821 72199861 41 TTCGTCCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCT TTCGTCCTTTTCCGCGGTTGCTGCTTGCTGTGAGTGTCTCT < 41bp 1 0.310991834782997 1 0.218851238489151 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199841 chr17:72199834 . . 0 14 hm5C_associated_SNPs_12618 0 0 79 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:72199800-72199840
64251 chr17 72199834 72199834 1 + C G rs76291586 72199848 + 72199828 72199868 41 TTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCTAGGGTGA TTTTCCGCGGTTGCTGCTTGCTGTGAGTGTCTCTAGGGTGA < 41bp 1 0.424799330990876 1 0.123483389616013 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199848 chr17:72199834 . . 0 7 hm5C_associated_SNPs_12619 0 0 79 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:72199800-72199840
64251 chr17 72199845 72199845 1 + T C rs541788320 72199841 + 72199821 72199861 41 TTCGTCCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCT TTCGTCCTTTTCCCCGGTTGCTGCCTGCTGTGAGTGTCTCT < 41bp 1 0.226730045482689 1 0.16775369644165 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199841 chr17:72199845 . . 0 25 hm5C_associated_SNPs_12620 0 0 76 EIF3G POSTAR2 GSE65004,GSM1585673 chr17:72199814-72199854
64251 chr17 72199845 72199845 1 + T C rs541788320 72199848 + 72199828 72199868 41 TTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCTAGGGTGA TTTTCCCCGGTTGCTGCCTGCTGTGAGTGTCTCTAGGGTGA < 41bp 1 0.331793778830596 1 0.199148297309875 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199848 chr17:72199845 . . 0 18 hm5C_associated_SNPs_12621 0 0 76 EIF3G POSTAR2 GSE65004,GSM1585673 chr17:72199814-72199854
64251 chr17 72199860 72199860 1 + C G rs76423818 72199841 + 72199821 72199861 41 TTCGTCCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCT TTCGTCCTTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTGT < 41bp 1 0.278711917337238 1 0.148866266012192 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199841 chr17:72199860 . . 0 40 hm5C_associated_SNPs_12622 0 0 66 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:72199814-72199863
64251 chr17 72199860 72199860 1 + C G rs76423818 72199848 + 72199828 72199868 41 TTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTCTAGGGTGA TTTTCCCCGGTTGCTGCTTGCTGTGAGTGTCTGTAGGGTGA < 41bp 1 0.387640845904377 1 0.0641725361347198 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL38 ENSG00000172809 UTR5 Human protein_coding chr17:72199848 chr17:72199860 . . 0 33 hm5C_associated_SNPs_12623 0 0 66 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:72199814-72199863
64251 chr17 72764749 72764749 1 + C G rs199563744 72764746 + 72764726 72764766 41 GAAACGCAGCAGCAAACGGGCCCCGCAGATGGACTGGAGCA GAAACGCAGCAGCAAACGGGCCCGGCAGATGGACTGGAGCA < 41bp 1 0.341774006139217 1 0.197117298841476 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764746 chr17:72764749 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_12624 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:72764737-72764768
64251 chr17 73030076 73030076 1 + G A rs115296203 73030056 + 73030036 73030076 41 TAAGCCAGGGATTGTGGGTTCGAGTCCCACCTGGGGTAGAG TAAGCCAGGGATTGTGGGTTCGAGTCCCACCTGGGGTAGAA < 41bp 1 0.474799216380551 1 0.472091495990753 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030056 chr17:73030076 . . 0 41 hm5C_associated_SNPs_12625 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030076 73030076 1 + G A rs115296203 73030062 + 73030042 73030082 41 AGGGATTGTGGGTTCGAGTCCCACCTGGGGTAGAGGTGAAA AGGGATTGTGGGTTCGAGTCCCACCTGGGGTAGAAGTGAAA < 41bp 1 0.0456536825561849 1 0.106846481561661 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030062 chr17:73030076 . . 0 35 hm5C_associated_SNPs_12626 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030076 73030076 1 + G A rs115296203 73030086 + 73030066 73030106 41 CTGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATT CTGGGGTAGAAGTGAAAGTTCCTTTTACGGAATTTTTTATT < 41bp 1 0.0203113925107533 1 0.0587451756000519 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030086 chr17:73030076 . . 0 11 hm5C_associated_SNPs_12627 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030076 73030076 1 + G A rs115296203 73030087 + 73030067 73030107 41 TGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATTT TGGGGTAGAAGTGAAAGTTCCTTTTACGGAATTTTTTATTT < 41bp 1 0.0497586735255049 1 0.0625859797000885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030087 chr17:73030076 . . 0 10 hm5C_associated_SNPs_12628 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030083 73030083 1 + G A rs116725889 73030086 + 73030066 73030106 41 CTGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATT CTGGGGTAGAGGTGAAAATTCCTTTTACGGAATTTTTTATT < 41bp 1 0.0315810468429122 1 0.100319594144821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030086 chr17:73030083 . . 0 18 hm5C_associated_SNPs_12629 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030083 73030083 1 + G A rs116725889 73030087 + 73030067 73030107 41 TGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATTT TGGGGTAGAGGTGAAAATTCCTTTTACGGAATTTTTTATTT < 41bp 1 0.0706570813168481 1 0.0798285007476807 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030087 chr17:73030083 . . 0 17 hm5C_associated_SNPs_12630 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:73029993-73030090
64251 chr17 73030091 73030091 1 + T C rs565483275 73030086 + 73030066 73030106 41 CTGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATT CTGGGGTAGAGGTGAAAGTTCCTTTCACGGAATTTTTTATT < 41bp 1 0.0175279831939656 1 0.078833669424057 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030086 chr17:73030091 . . 0 26 hm5C_associated_SNPs_12631 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73030091 73030091 1 + T C rs565483275 73030087 + 73030067 73030107 41 TGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATTT TGGGGTAGAGGTGAAAGTTCCTTTCACGGAATTTTTTATTT < 41bp 1 0.0405960156932084 1 0.0966687798500061 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030087 chr17:73030091 . . 0 25 hm5C_associated_SNPs_12632 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73030094 73030094 1 + G A rs12943281 73030086 + 73030066 73030106 41 CTGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATT CTGGGGTAGAGGTGAAAGTTCCTTTTACAGAATTTTTTATT < 41bp 1 0.0194293869271973 1 0.0562433302402496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030086 chr17:73030094 . . 0 29 hm5C_associated_SNPs_12633 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73030094 73030094 1 + G A rs12943281 73030087 + 73030067 73030107 41 TGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATTT TGGGGTAGAGGTGAAAGTTCCTTTTACAGAATTTTTTATTT < 41bp 1 0.0568435507225812 1 0.0579130947589874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030087 chr17:73030094 . . 0 28 hm5C_associated_SNPs_12634 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73030097 73030097 1 + A T rs186775440 73030086 + 73030066 73030106 41 CTGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATT CTGGGGTAGAGGTGAAAGTTCCTTTTACGGATTTTTTTATT < 41bp 1 0.0238307212177114 1 0.0799922049045563 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030086 chr17:73030097 . . 0 32 hm5C_associated_SNPs_12635 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73030097 73030097 1 + A T rs186775440 73030087 + 73030067 73030107 41 TGGGGTAGAGGTGAAAGTTCCTTTTACGGAATTTTTTATTT TGGGGTAGAGGTGAAAGTTCCTTTTACGGATTTTTTTATTT < 41bp 1 0.0426538405942384 1 0.0618999600410461 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73030087 chr17:73030097 . . 0 31 hm5C_associated_SNPs_12636 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:73030043-73030102
64251 chr17 73031263 73031263 1 + C T rs188459486 73031268 + 73031248 73031288 41 AGAAGATTGAGGGTTCGAGTCCCTTCGTGGTCGGAACGTTT AGAAGATTGAGGGTTTGAGTCCCTTCGTGGTCGGAACGTTT < 41bp 1 0.0416385973774185 1 0.031782329082489 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73031268 chr17:73031263 . . 0 16 hm5C_associated_SNPs_12637 0 0 55 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:73031200-73031266
64251 chr17 73031263 73031263 1 + C T rs188459486 73031269 + 73031249 73031289 41 GAAGATTGAGGGTTCGAGTCCCTTCGTGGTCGGAACGTTTT GAAGATTGAGGGTTTGAGTCCCTTCGTGGTCGGAACGTTTT < 41bp 1 0.0132041993972812 1 0.0283395946025848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73031269 chr17:73031263 . . 0 15 hm5C_associated_SNPs_12638 0 0 55 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:73031200-73031266
64251 chr17 73031263 73031263 1 + C T rs188459486 73031270 + 73031250 73031290 41 AAGATTGAGGGTTCGAGTCCCTTCGTGGTCGGAACGTTTTA AAGATTGAGGGTTTGAGTCCCTTCGTGGTCGGAACGTTTTA < 41bp 1 0.187875739218504 1 0.237320303916931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73031270 chr17:73031263 . . 0 14 hm5C_associated_SNPs_12639 0 0 55 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:73031200-73031266
64251 chr17 73031263 73031263 1 + C T rs188459486 73031273 + 73031253 73031293 41 ATTGAGGGTTCGAGTCCCTTCGTGGTCGGAACGTTTTAATC ATTGAGGGTTTGAGTCCCTTCGTGGTCGGAACGTTTTAATC < 41bp 1 0.555726118282941 1 0.745377242565155 experiment 0.888547763434118 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73031273 chr17:73031263 . . 0 11 hm5C_associated_SNPs_12640 0 0 55 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:73031200-73031266
64251 chr17 73031263 73031263 1 + C T rs188459486 73031279 + 73031259 73031299 41 GGTTCGAGTCCCTTCGTGGTCGGAACGTTTTAATCCCTGCA GGTTTGAGTCCCTTCGTGGTCGGAACGTTTTAATCCCTGCA < 41bp 1 0.670022663946593 1 0.789452433586121 experiment 0.659954672106815 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL58;ATP5H ENSG00000180901 intronic Human protein_coding chr17:73031279 chr17:73031263 . . 0 5 hm5C_associated_SNPs_12641 0 0 55 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:73031200-73031266
64251 chr17 73060052 73060052 1 + T C rs186879104 73060062 + 73060042 73060082 41 GCTGTTTCTTTGAAAGTTGCCAAATGTGTTATGTTGTGTCT GCTGTTTCTTCGAAAGTTGCCAAATGTGTTATGTTGTGTCT < 41bp 1 0.311538153098922 1 0.914053320884705 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060062 chr17:73060052 . . 0 11 hm5C_associated_SNPs_12642 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr17:73060010-73060053
64251 chr17 73060073 73060073 1 + T A rs11077773 73060062 + 73060042 73060082 41 GCTGTTTCTTTGAAAGTTGCCAAATGTGTTATGTTGTGTCT GCTGTTTCTTTGAAAGTTGCCAAATGTGTTAAGTTGTGTCT < 41bp 1 0.28403294196186 1 0.878129959106445 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control KCTD2 ENSG00000180901 UTR3 Human protein_coding chr17:73060062 chr17:73060073 . . 0 32 hm5C_associated_SNPs_12643 0 1 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:73060051-73060174
64251 chr17 73257986 73257986 1 + C T rs8075276 73257966 + 73257946 73257986 41 AGGGCAGTCCTTGTGGGGTCCTCGTGGCCAGCCAAGATGGC AGGGCAGTCCTTGTGGGGTCCTCGTGGCCAGCCAAGATGGT < 41bp 1 0.581305216931008 1 0.475688874721527 experiment 0.837389566137984 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73257966 chr17:73257986 nonsynonymous SNV 0.857 0 41 hm5C_associated_SNPs_12644 1 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:73257980-73258000
64251 chr17 73513677 73513677 1 + A C rs11559205 73513687 + 73513667 73513707 41 GCCACTGTCTATCCAGGAAGCTTACCAGCTGCTGCTGACCG GCCACTGTCTCTCCAGGAAGCTTACCAGCTGCTGCTGACCG < 41bp 1 0.0579450892287986 1 0.0181275904178619 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73513687 chr17:73513677 nonsynonymous SNV 0.995 2 11 hm5C_associated_SNPs_12645 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73513676-73513712
64251 chr17 73513705 73513705 1 + C A rs201623351 73513687 + 73513667 73513707 41 GCCACTGTCTATCCAGGAAGCTTACCAGCTGCTGCTGACCG GCCACTGTCTATCCAGGAAGCTTACCAGCTGCTGCTGAACG < 41bp 1 0.0440153668426274 1 0.0486963093280792 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73513687 chr17:73513705 nonsynonymous SNV 0.687 0 39 hm5C_associated_SNPs_12646 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73513676-73513712
64251 chr17 73753745 73753745 1 + G A rs530129255 73753742 + 73753722 73753762 41 ACCCCTGGGGGCCCAGCCCACCCGCATGCACAGAGCAGGGG ACCCCTGGGGGCCCAGCCCACCCACATGCACAGAGCAGGGG < 41bp 1 0.193544784182982 1 0.244442820549011 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITGB4 ENSG00000132470 CDS Human protein_coding chr17:73753742 chr17:73753745 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_12656 0 0 1 PCBP2 POSTAR2 ENCODE chr17:73753598-73753753
64251 chr17 74267010 74267010 1 + T C rs8901 74267025 + 74267005 74267045 41 GTCACTGGGCAGCCACATAGCAGCTGCAGGTCCCAGGAGGG GTCACCGGGCAGCCACATAGCAGCTGCAGGTCCCAGGAGGG < 41bp 1 0.723017998803714 1 0.563968598842621 experiment 0.553964002392572 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBALD2 ENSG00000185262 UTR3 Human protein_coding chr17:74267025 chr17:74267010 . . 0 6 hm5C_associated_SNPs_12662 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:74266962-74267018
64251 chr17 74379390 74379390 1 + A C rs528471547 74379383 + 74379363 74379403 41 CCGATACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTC CCGATACGCGCGCGGAGCTGCGGCCCCCGGGACCCCGCGTC < 41bp 1 0.517182501060458 1 0.548034727573395 experiment 0.965634997879083 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRPSAP1;SPHK1 ENSG00000161542;ENSG00000176170 intronic Human other chr17:74379383 chr17:74379390 . . 0 28 hm5C_associated_SNPs_12663 0 0 1 CSTF2T POSTAR2 ENCODE chr17:74379366-74379415
64251 chr17 74379390 74379390 1 + A C rs528471547 74379386 + 74379366 74379406 41 ATACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCA ATACGCGCGCGGAGCTGCGGCCCCCGGGACCCCGCGTCCCA < 41bp 1 0.159618171766883 1 0.0646080076694489 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRPSAP1;SPHK1 ENSG00000161542;ENSG00000176170 intronic Human other chr17:74379386 chr17:74379390 . . 0 25 hm5C_associated_SNPs_12664 0 0 1 CSTF2T POSTAR2 ENCODE chr17:74379366-74379415
64251 chr17 74379390 74379390 1 + A C rs528471547 74379387 + 74379367 74379407 41 TACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAG TACGCGCGCGGAGCTGCGGCCCCCGGGACCCCGCGTCCCAG < 41bp 1 0.357346757687763 1 0.336397469043732 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRPSAP1;SPHK1 ENSG00000161542;ENSG00000176170 intronic Human other chr17:74379387 chr17:74379390 . . 0 24 hm5C_associated_SNPs_12665 0 0 1 CSTF2T POSTAR2 ENCODE chr17:74379366-74379415
64251 chr17 74379390 74379390 1 + A C rs528471547 74379388 + 74379368 74379408 41 ACGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAGC ACGCGCGCGGAGCTGCGGCCCCCGGGACCCCGCGTCCCAGC < 41bp 1 0.599867436364998 1 0.350023508071899 experiment 0.800265127270003 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRPSAP1;SPHK1 ENSG00000161542;ENSG00000176170 intronic Human other chr17:74379388 chr17:74379390 . . 0 23 hm5C_associated_SNPs_12666 0 0 1 CSTF2T POSTAR2 ENCODE chr17:74379366-74379415
64251 chr17 74379390 74379390 1 + A C rs528471547 74379389 + 74379369 74379409 41 CGCGCGCGGAGCTGCGGCCCCAGGGACCCCGCGTCCCAGCC CGCGCGCGGAGCTGCGGCCCCCGGGACCCCGCGTCCCAGCC < 41bp 1 0.693675706629523 1 0.850048542022705 experiment 0.612648586740953 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRPSAP1;SPHK1 ENSG00000161542;ENSG00000176170 intronic Human other chr17:74379389 chr17:74379390 . . 0 22 hm5C_associated_SNPs_12667 0 0 1 CSTF2T POSTAR2 ENCODE chr17:74379366-74379415
64251 chr17 74383637 74383637 1 + G T rs3744039 74383622 + 74383602 74383642 41 GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGAT GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCATCAGAT < 41bp 1 0.56663068704019 1 0.716617345809937 experiment 0.86673862591962 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383622 chr17:74383637 nonsynonymous SNV 0.001 1 36 hm5C_associated_SNPs_12668 0 0 2 DDX55 POSTAR2 ENCODE chr17:74383583-74383637
64251 chr17 74383638 74383638 1 + C T rs3744040 74383622 + 74383602 74383642 41 GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGAT GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGTAGAT < 41bp 1 0.547194893892366 1 0.710124135017395 experiment 0.905610212215268 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383622 chr17:74383638 stopgain 0.003 0 37 hm5C_associated_SNPs_12669 0 0 1 RBM15 POSTAR2 ENCODE chr17:74383605-74383641
64251 chr17 74557211 74557211 1 + A C rs16969028 74557218 + 74557198 74557238 41 CATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAG CATGATGATTTCACGTTATCCCTGTCTGAAGGCAAAGAAAG < 41bp 1 0.0946191361264457 1 0.048850953578949 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557218 chr17:74557211 . . 0 14 hm5C_associated_SNPs_12670 0 0 62 TARDBP POSTAR2 DRA001158,DRS012385 chr17:74557130-74557212
64251 chr17 74557211 74557211 1 + A C rs16969028 74557219 + 74557199 74557239 41 ATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAGG ATGATGATTTCACGTTATCCCTGTCTGAAGGCAAAGAAAGG < 41bp 1 0.117886172698094 1 0.0701704025268555 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557219 chr17:74557211 . . 0 13 hm5C_associated_SNPs_12671 0 0 62 TARDBP POSTAR2 DRA001158,DRS012385 chr17:74557130-74557212
64251 chr17 74557211 74557211 1 + A C rs16969028 74557230 + 74557210 74557250 41 AAGTTATCCCTGTCTGAAGGCAAAGAAAGGCCTTTCTGTGT ACGTTATCCCTGTCTGAAGGCAAAGAAAGGCCTTTCTGTGT < 41bp 1 0.300869750797145 1 0.339674115180969 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557230 chr17:74557211 . . 0 2 hm5C_associated_SNPs_12672 0 0 62 TARDBP POSTAR2 DRA001158,DRS012385 chr17:74557130-74557212
64251 chr17 74557239 74557239 1 + G C rs73369107 74557219 + 74557199 74557239 41 ATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAGG ATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAGC < 41bp 1 0.105123618736192 1 0.0653258562088013 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557219 chr17:74557239 . . 0 41 hm5C_associated_SNPs_12673 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557239-74557269
64251 chr17 74557239 74557239 1 + G C rs73369107 74557230 + 74557210 74557250 41 AAGTTATCCCTGTCTGAAGGCAAAGAAAGGCCTTTCTGTGT AAGTTATCCCTGTCTGAAGGCAAAGAAAGCCCTTTCTGTGT < 41bp 1 0.263599007111351 1 0.260926783084869 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557230 chr17:74557239 . . 0 30 hm5C_associated_SNPs_12674 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557239-74557269
64251 chr17 74557239 74557239 1 + G C rs73369107 74557240 + 74557220 74557260 41 TGTCTGAAGGCAAAGAAAGGCCTTTCTGTGTGGAATTTGAA TGTCTGAAGGCAAAGAAAGCCCTTTCTGTGTGGAATTTGAA < 41bp 1 0.011687700716305 1 0.059215784072876 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557240 chr17:74557239 . . 0 20 hm5C_associated_SNPs_12675 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557239-74557269
64251 chr17 74557239 74557239 1 + G C rs73369107 74557241 + 74557221 74557261 41 GTCTGAAGGCAAAGAAAGGCCTTTCTGTGTGGAATTTGAAT GTCTGAAGGCAAAGAAAGCCCTTTCTGTGTGGAATTTGAAT < 41bp 1 0.0214196462364491 1 0.0351219773292542 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557241 chr17:74557239 . . 0 19 hm5C_associated_SNPs_12676 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557239-74557269
64251 chr17 74557239 74557239 1 + G C rs73369107 74557245 + 74557225 74557265 41 GAAGGCAAAGAAAGGCCTTTCTGTGTGGAATTTGAATATCT GAAGGCAAAGAAAGCCCTTTCTGTGTGGAATTTGAATATCT < 41bp 1 0.32463641747374 1 0.599227428436279 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557245 chr17:74557239 . . 0 15 hm5C_associated_SNPs_12677 0 0 67 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557239-74557269
64251 chr17 74557777 74557777 1 + C G rs137955606 74557758 + 74557738 74557778 41 TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTGT < 41bp 1 0.286527202083741 1 0.0959270894527435 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557758 chr17:74557777 . . 0 40 hm5C_associated_SNPs_12678 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 74557777 74557777 1 + C G rs137955606 74557772 + 74557752 74557792 41 TCTGGACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTT TCTGGACTGAGGGAAATAATCTATTGTGAGGCTTAAGGGTT < 41bp 1 0.375981288997169 1 0.176806956529617 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557772 chr17:74557777 . . 0 26 hm5C_associated_SNPs_12679 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 74557784 74557784 1 + T A rs79775067 74557772 + 74557752 74557792 41 TCTGGACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTT TCTGGACTGAGGGAAATAATCTATTCTGAGGCATAAGGGTT < 41bp 1 0.273935556350287 1 0.0899583995342255 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557772 chr17:74557784 . . 0 33 hm5C_associated_SNPs_12680 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 74557784 74557784 1 + T A rs79775067 74557777 + 74557757 74557797 41 ACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTTTGGCT ACTGAGGGAAATAATCTATTCTGAGGCATAAGGGTTTGGCT < 41bp 1 0.547602702871065 1 0.485597461462021 experiment 0.904794594257871 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557777 chr17:74557784 . . 0 28 hm5C_associated_SNPs_12681 0 0 52 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 75085434 75085434 1 + G A rs2678770 75085422 + 75085402 75085442 41 AGGCTCCTGTGTTGTTGAGCCTGCCAAGTTGTGGGTGCAGC AGGCTCCTGTGTTGTTGAGCCTGCCAAGTTGTAGGTGCAGC < 41bp 1 0.191200862769069 1 0.110502511262894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085422 chr17:75085434 . . 0 33 hm5C_associated_SNPs_12683 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75085434 75085434 1 + G A rs2678770 75085425 + 75085405 75085445 41 CTCCTGTGTTGTTGAGCCTGCCAAGTTGTGGGTGCAGCATG CTCCTGTGTTGTTGAGCCTGCCAAGTTGTAGGTGCAGCATG < 41bp 1 0.14384080520067 1 0.384666502475739 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085425 chr17:75085434 . . 0 30 hm5C_associated_SNPs_12684 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75085434 75085434 1 + G A rs2678770 75085426 + 75085406 75085446 41 TCCTGTGTTGTTGAGCCTGCCAAGTTGTGGGTGCAGCATGG TCCTGTGTTGTTGAGCCTGCCAAGTTGTAGGTGCAGCATGG < 41bp 1 0.322964153074747 1 0.483523964881897 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085426 chr17:75085434 . . 0 29 hm5C_associated_SNPs_12685 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75085434 75085434 1 + G A rs2678770 75085439 + 75085419 75085459 41 AGCCTGCCAAGTTGTGGGTGCAGCATGGTACCAGGCAGCCC AGCCTGCCAAGTTGTAGGTGCAGCATGGTACCAGGCAGCCC < 41bp 1 0.554967426388114 1 0.306269228458405 experiment 0.890065147223773 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085439 chr17:75085434 . . 0 16 hm5C_associated_SNPs_12686 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75085434 75085434 1 + G A rs2678770 75085449 + 75085429 75085469 41 GTTGTGGGTGCAGCATGGTACCAGGCAGCCCAACCCTGACC GTTGTAGGTGCAGCATGGTACCAGGCAGCCCAACCCTGACC < 41bp 1 0.38022598764564 1 0.290946245193481 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085449 chr17:75085434 . . 0 6 hm5C_associated_SNPs_12687 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75085434 75085434 1 + G A rs2678770 75085454 + 75085434 75085474 41 GGGTGCAGCATGGTACCAGGCAGCCCAACCCTGACCTAAAG AGGTGCAGCATGGTACCAGGCAGCCCAACCCTGACCTAAAG < 41bp 1 0.351227895827462 1 0.35416167974472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA16 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75085454 chr17:75085434 . . 0 1 hm5C_associated_SNPs_12688 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:75085388-75085447
64251 chr17 75090184 75090184 1 + G A rs150793676 75090199 + 75090179 75090219 41 GCGGTGGTGTGACCTCGGCTCACTGCATCCTCCGCCTCCCG GCGGTAGTGTGACCTCGGCTCACTGCATCCTCCGCCTCCCG < 41bp 1 0.284151657922477 1 0.119969218969345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090199 chr17:75090184 . . 0 6 hm5C_associated_SNPs_12689 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:75090131-75090184
64251 chr17 75090194 75090194 1 + C G rs557214931 75090199 + 75090179 75090219 41 GCGGTGGTGTGACCTCGGCTCACTGCATCCTCCGCCTCCCG GCGGTGGTGTGACCTGGGCTCACTGCATCCTCCGCCTCCCG < 41bp 1 0.324614008979281 1 0.0994852781295776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090199 chr17:75090194 . . 0 16 hm5C_associated_SNPs_12690 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:75090159-75090195
64251 chr17 75090211 75090211 1 + C T rs117430551 75090199 + 75090179 75090219 41 GCGGTGGTGTGACCTCGGCTCACTGCATCCTCCGCCTCCCG GCGGTGGTGTGACCTCGGCTCACTGCATCCTCTGCCTCCCG < 41bp 1 0.285426851191911 1 0.156084060668945 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090199 chr17:75090211 . . 0 33 hm5C_associated_SNPs_12691 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:75090162-75090223
64251 chr17 75090363 75090363 1 + G A rs149508879 75090358 + 75090338 75090378 41 GATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGG GATCCACCTGCCTTGGCCTCCCAAAATGCTGGGATTACAGG < 41bp 1 0.170663138269619 1 0.360703349113464 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090358 chr17:75090363 . . 0 26 hm5C_associated_SNPs_12693 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr17:75090360-75090380
64251 chr17 75090363 75090363 1 + G A rs149508879 75090359 + 75090339 75090379 41 ATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGT ATCCACCTGCCTTGGCCTCCCAAAATGCTGGGATTACAGGT < 41bp 1 0.484444976288187 1 0.651015162467957 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090359 chr17:75090363 . . 0 25 hm5C_associated_SNPs_12694 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr17:75090360-75090380
64251 chr17 75090363 75090363 1 + G A rs149508879 75090366 + 75090346 75090386 41 TGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCT TGCCTTGGCCTCCCAAAATGCTGGGATTACAGGTATGAGCT < 41bp 1 0.619107785748403 1 0.724806785583496 experiment 0.761784428503195 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090366 chr17:75090363 . . 0 18 hm5C_associated_SNPs_12695 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr17:75090360-75090380
64251 chr17 75090385 75090385 1 + C T rs546511692 75090366 + 75090346 75090386 41 TGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCT TGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGTT < 41bp 1 0.527913328275564 1 0.538271427154541 experiment 0.944173343448871 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090366 chr17:75090385 . . 0 40 hm5C_associated_SNPs_12696 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:75090371-75090437
64251 chr17 75090826 75090826 1 + A G rs3760141 75090806 + 75090786 75090826 41 GATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGA GATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGG < 41bp 1 0.188246409758326 1 0.464189141988754 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090806 chr17:75090826 . . 0 41 hm5C_associated_SNPs_12697 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:75090815-75090836
64251 chr17 75090826 75090826 1 + A G rs3760141 75090807 + 75090787 75090827 41 ATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGAC ATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGC < 41bp 1 0.357953937979584 1 0.54917299747467 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SNHG20 ENSG00000234912 ncRNA_exonic Human processed_transcript chr17:75090807 chr17:75090826 . . 0 40 hm5C_associated_SNPs_12698 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr17:75090815-75090836
64251 chr17 75211018 75211018 1 + A G rs537196896 75211007 + 75210987 75211027 41 CTAGGAGGCCGTCTTGGAACCAGCAAGTCGCATTTGCCACT CTAGGAGGCCGTCTTGGAACCAGCAAGTCGCGTTTGCCACT < 41bp 1 0.776569211715129 1 0.704389929771423 experiment 0.446861576569743 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEC14L1 ENSG00000129657 UTR3 Human protein_coding chr17:75211007 chr17:75211018 . . 0 32 hm5C_associated_SNPs_12699 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:75210964-75211058
64251 chr17 75369437 75369437 1 + G A rs568226661 75369434 + 75369414 75369454 41 CCCCCATTCATTCAGCTGAGCCAGGGGGCCTAGGGGCTCCT CCCCCATTCATTCAGCTGAGCCAAGGGGCCTAGGGGCTCCT < 41bp 1 0.0625845279547994 1 0.0651458501815796 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEPT9 ENSG00000184640 UTR5 Human protein_coding chr17:75369434 chr17:75369437 . . 0 24 hm5C_associated_SNPs_12700 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:75369437-75369438
64251 chr17 75494705 75494705 1 + A G rs2627223 75494704 + 75494684 75494724 41 AGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCCAGA AGCAGCGCCATGGCCAACGGCGTGGAGGAGAAGGAGCCAGA < 41bp 1 0.468062592343531 1 0.540229558944702 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75494704 chr17:75494705 nonsynonymous SNV 0.063 0 22 hm5C_associated_SNPs_12701 1 0 3 CELF2 POSTAR2 GSE71264,GSM1831627 chr17:75494694-75494715
64251 chr17 75494947 75494947 1 + G A rs560243481 75494927 + 75494907 75494947 41 GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGG GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGA < 41bp 1 0.174802644049578 1 0.0875540971755981 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75494927 chr17:75494947 . . 0 41 hm5C_associated_SNPs_12702 1 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:75494936-75494973
64251 chr17 75494947 75494947 1 + G A rs560243481 75494929 + 75494909 75494949 41 CAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCT CAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGACT < 41bp 1 0.261044649026047 1 0.339856088161469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75494929 chr17:75494947 . . 0 39 hm5C_associated_SNPs_12703 1 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:75494936-75494973
64251 chr17 75494947 75494947 1 + G A rs560243481 75494930 + 75494910 75494950 41 AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGACTG < 41bp 1 0.578956792706098 1 0.614406287670135 experiment 0.842086414587804 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75494930 chr17:75494947 . . 0 38 hm5C_associated_SNPs_12704 1 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:75494936-75494973
64251 chr17 75494947 75494947 1 + G A rs560243481 75494931 + 75494911 75494951 41 GTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGC GTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGACTGC < 41bp 1 0.498813433322474 1 0.616983771324158 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75494931 chr17:75494947 . . 0 37 hm5C_associated_SNPs_12705 1 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:75494936-75494973
64251 chr17 75494947 75494947 1 + G A rs560243481 75494932 + 75494912 75494952 41 TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCA TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGACTGCA < 41bp 1 0.774362974425651 1 0.921339869499207 experiment 0.451274051148699 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 UTR3 Human protein_coding chr17:75494932 chr17:75494947 . . 0 36 hm5C_associated_SNPs_12706 1 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:75494936-75494973
64251 chr17 76203600 76203600 1 + T A rs9903738 76203617 + 76203597 76203637 41 TTGTGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTC TTGAGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTC < 41bp 1 0.133118140840681 1 0.153891205787659 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203617 chr17:76203600 . . 0 4 hm5C_associated_SNPs_12740 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76203576-76203626
64251 chr17 76203600 76203600 1 + T A rs9903738 76203618 + 76203598 76203638 41 TGTGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTCC TGAGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTCC < 41bp 1 0.373080125049859 1 0.165235877037048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203618 chr17:76203600 . . 0 3 hm5C_associated_SNPs_12741 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76203576-76203626
64251 chr17 76203600 76203600 1 + T A rs9903738 76203620 + 76203600 76203640 41 TGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTCCAG AGATTCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTCCAG < 41bp 1 0.447762744948369 1 0.293869078159332 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203620 chr17:76203600 . . 0 1 hm5C_associated_SNPs_12742 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76203576-76203626
64251 chr17 76203652 76203652 1 + T C rs60968356 76203648 + 76203628 76203668 41 GCTGGGATTCCAGGCGTGAGCCACTGCGCCCGGCCAGAATG GCTGGGATTCCAGGCGTGAGCCACCGCGCCCGGCCAGAATG < 41bp 1 0.468998364766335 1 0.220529854297638 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203648 chr17:76203652 . . 0 25 hm5C_associated_SNPs_12743 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76203638-76203671
64251 chr17 76203652 76203652 1 + T C rs60968356 76203649 + 76203629 76203669 41 CTGGGATTCCAGGCGTGAGCCACTGCGCCCGGCCAGAATGG CTGGGATTCCAGGCGTGAGCCACCGCGCCCGGCCAGAATGG < 41bp 1 0.745929814463473 1 0.738812029361725 experiment 0.508140371073054 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203649 chr17:76203652 . . 0 24 hm5C_associated_SNPs_12744 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76203638-76203671
64251 chr17 76203652 76203652 1 + T C rs60968356 76203656 + 76203636 76203676 41 TCCAGGCGTGAGCCACTGCGCCCGGCCAGAATGGCATTATA TCCAGGCGTGAGCCACCGCGCCCGGCCAGAATGGCATTATA < 41bp 1 0.572805325946905 1 0.249207049608231 experiment 0.85438934810619 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203656 chr17:76203652 . . 0 17 hm5C_associated_SNPs_12745 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76203638-76203671
64251 chr17 76203652 76203652 1 + T C rs60968356 76203661 + 76203641 76203681 41 GCGTGAGCCACTGCGCCCGGCCAGAATGGCATTATATTTAA GCGTGAGCCACCGCGCCCGGCCAGAATGGCATTATATTTAA < 41bp 1 0.734233008124971 1 0.0751518309116364 experiment 0.531533983750058 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203661 chr17:76203652 . . 0 12 hm5C_associated_SNPs_12746 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76203638-76203671
64251 chr17 77758691 77758691 1 + G A rs3751957 77758688 + 77758668 77758708 41 CCGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGAC CCGCCCAGCACTGGACAGAACCCATCAGTGTCCGTTCAGAC < 41bp 1 0.097355524798208 1 0.046326607465744 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758688 chr17:77758691 synonymous SNV . 0 24 hm5C_associated_SNPs_12749 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77758691 77758691 1 + G A rs3751957 77758689 + 77758669 77758709 41 CGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACC CGCCCAGCACTGGACAGAACCCATCAGTGTCCGTTCAGACC < 41bp 1 0.0401264879534395 1 0.126224130392075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758689 chr17:77758691 synonymous SNV . 0 23 hm5C_associated_SNPs_12750 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77758691 77758691 1 + G A rs3751957 77758690 + 77758670 77758710 41 GCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACCA GCCCAGCACTGGACAGAACCCATCAGTGTCCGTTCAGACCA < 41bp 1 0.739797512945423 1 0.0672014951705933 experiment 0.520404974109154 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758690 chr17:77758691 synonymous SNV . 0 22 hm5C_associated_SNPs_12751 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77760715 77760715 1 + C G rs569776049 77760701 + 77760681 77760721 41 TGTGCCTTTGGGGAGGGACCCATGTCCATGGCTTCGTTGAG TGTGCCTTTGGGGAGGGACCCATGTCCATGGCTTGGTTGAG < 41bp 1 0.318527764069288 1 0.136140793561935 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 UTR3 Human protein_coding chr17:77760701 chr17:77760715 . . 0 35 hm5C_associated_SNPs_12752 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:77760709-77760729
64251 chr17 78078642 78078642 1 + C A rs2229222 78078646 + 78078626 78078666 41 CAGTGCGACGTCCCCCCCAACAGCCGCTTCGATTGCGCCCC CAGTGCGACGTCCCCCACAACAGCCGCTTCGATTGCGCCCC < 41bp 1 0.373162027787127 1 0.324353694915771 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078646 chr17:78078642 nonsynonymous SNV 0.307 2 17 hm5C_associated_SNPs_12754 0 0 1 SND1 POSTAR2 ENCODE chr17:78078639-78078649
64251 chr17 78078643 78078643 1 + C A rs146615896 78078646 + 78078626 78078666 41 CAGTGCGACGTCCCCCCCAACAGCCGCTTCGATTGCGCCCC CAGTGCGACGTCCCCCCAAACAGCCGCTTCGATTGCGCCCC < 41bp 1 0.446609642504594 1 0.683048903942108 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078646 chr17:78078643 synonymous SNV . 0 18 hm5C_associated_SNPs_12755 1 0 1 SND1 POSTAR2 ENCODE chr17:78078639-78078649
64251 chr17 78078656 78078656 1 + G A rs1800299 78078646 + 78078626 78078666 41 CAGTGCGACGTCCCCCCCAACAGCCGCTTCGATTGCGCCCC CAGTGCGACGTCCCCCCCAACAGCCGCTTCAATTGCGCCCC < 41bp 1 0.372133896353815 1 0.693355560302734 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078646 chr17:78078656 nonsynonymous SNV 0.507 3 31 hm5C_associated_SNPs_12756 3 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:78078656-78078657
64251 chr17 78078736 78078736 1 + G A rs574947353 78078746 + 78078726 78078766 41 AGCAGGGGCTGCAGGGAGCCCAGATGGGGCAGCCCTGGTGC AGCAGGGGCTACAGGGAGCCCAGATGGGGCAGCCCTGGTGC < 41bp 1 0.678067049062398 1 0.849809169769287 experiment 0.643865901875204 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078746 chr17:78078736 synonymous SNV . 0 11 hm5C_associated_SNPs_12757 1 0 2 EIF3H POSTAR2 ENCODE chr17:78078689-78078767
64251 chr17 78078753 78078753 1 + G A rs138034915 78078746 + 78078726 78078766 41 AGCAGGGGCTGCAGGGAGCCCAGATGGGGCAGCCCTGGTGC AGCAGGGGCTGCAGGGAGCCCAGATGGAGCAGCCCTGGTGC < 41bp 1 0.677101641857912 1 0.880834937095642 experiment 0.645796716284176 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078746 chr17:78078753 nonsynonymous SNV 0.913 0 28 hm5C_associated_SNPs_12758 1 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:78078748-78078780
64251 chr17 78078753 78078753 1 + G A rs138034915 78078760 + 78078740 78078780 41 GGAGCCCAGATGGGGCAGCCCTGGTGCTTCTTCCCACCCAG GGAGCCCAGATGGAGCAGCCCTGGTGCTTCTTCCCACCCAG < 41bp 1 0.686768741507105 1 0.390459775924683 experiment 0.62646251698579 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078760 chr17:78078753 nonsynonymous SNV 0.913 0 14 hm5C_associated_SNPs_12759 1 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:78078748-78078780
64251 chr17 78087041 78087041 1 + G A rs1800309 78087058 + 78087038 78087078 41 AGCGAGCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT AGCAAGCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT < 41bp 1 0.654243173045477 1 0.332828342914581 experiment 0.691513653909045 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78087058 chr17:78087041 nonsynonymous SNV 0.911 1 4 hm5C_associated_SNPs_12760 3 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:78087040-78087060
64251 chr17 78201686 78201686 1 + C T rs61011315 78201694 + 78201674 78201714 41 GATGCGGGACCACGTGCCTCCCGTCCACCCCGAGATGCCCC GATGCGGGACCATGTGCCTCCCGTCCACCCCGAGATGCCCC < 41bp 1 0.0954288642045732 1 0.520676910877228 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201694 chr17:78201686 synonymous SNV . 0 13 hm5C_associated_SNPs_12767 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78201639-78201748
64251 chr17 78201687 78201687 1 + G A rs151155883 78201694 + 78201674 78201714 41 GATGCGGGACCACGTGCCTCCCGTCCACCCCGAGATGCCCC GATGCGGGACCACATGCCTCCCGTCCACCCCGAGATGCCCC < 41bp 1 0.0778597733462918 1 0.308976203203201 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201694 chr17:78201687 nonsynonymous SNV 0.069 1 14 hm5C_associated_SNPs_12768 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78201639-78201748
64251 chr17 78310124 78310124 1 + T C rs527433585 78310125 + 78310105 78310145 41 TCAGTGCATTCATGAAGCATCTGAAAAAGCTGTGGAAGGCT TCAGTGCATTCATGAAGCACCTGAAAAAGCTGTGGAAGGCT < 41bp 1 0.11751416003537 1 0.410942196846008 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78310125 chr17:78310124 synonymous SNV . 0 20 hm5C_associated_SNPs_12769 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:78310120-78310140
64251 chr17 78318479 78318479 1 + G A rs143002142 78318498 + 78318478 78318518 41 CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC CATACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC < 41bp 1 0.0475492556872428 1 0.0349644422531128 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78318498 chr17:78318479 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_12770 0 0 1 FMR1 POSTAR2 ENCODE chr17:78318477-78318482
64251 chr17 78321151 78321151 1 + G A rs115867721 78321138 + 78321118 78321158 41 GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTG GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGACCAAGTG < 41bp 1 0.0346643914536634 1 0.0515511631965637 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321138 chr17:78321151 nonsynonymous SNV 0.070 0 34 hm5C_associated_SNPs_12772 0 0 5 EIF3H POSTAR2 ENCODE chr17:78321130-78321181
64251 chr17 78321157 78321157 1 + T C rs61600413 78321138 + 78321118 78321158 41 GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTG GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGCG < 41bp 1 0.0368048469071402 1 0.0398610830307007 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321138 chr17:78321157 nonsynonymous SNV 0.003 0 40 hm5C_associated_SNPs_12773 0 0 5 EIF3H POSTAR2 ENCODE chr17:78321130-78321181
64251 chr17 78349663 78349663 1 + C T rs562763648 78349659 + 78349639 78349679 41 CCCACAATGCAAGCCTCCACCCCACGCCAGAGGTGAGTAAC CCCACAATGCAAGCCTCCACCCCATGCCAGAGGTGAGTAAC < 41bp 1 0.0335245418765895 1 0.156344473361969 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78349659 chr17:78349663 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_12776 0 0 8 BUD13 POSTAR2 ENCODE chr17:78349639-78349667
64251 chr17 78349664 78349664 1 + G A rs371433961 78349659 + 78349639 78349679 41 CCCACAATGCAAGCCTCCACCCCACGCCAGAGGTGAGTAAC CCCACAATGCAAGCCTCCACCCCACACCAGAGGTGAGTAAC < 41bp 1 0.0203882823648402 1 0.196544200181961 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78349659 chr17:78349664 synonymous SNV . 0 26 hm5C_associated_SNPs_12777 0 0 8 BUD13 POSTAR2 ENCODE chr17:78349639-78349667
64251 chr17 78350165 78350165 1 + G A rs150148627 78350171 + 78350151 78350191 41 TCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATT TCCTGATATCAGCCATTTTGCAACATCGCTCGTGGACAATT < 41bp 1 0.193879012993641 1 0.33419930934906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78350171 chr17:78350165 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_12778 0 0 4 DDX24 POSTAR2 ENCODE chr17:78350164-78350230
64251 chr17 78350175 78350175 1 + A G rs138587836 78350171 + 78350151 78350191 41 TCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATT TCCTGATATCAGCCGTTTTGCAACGTCGCTCGTGGACAATT < 41bp 1 0.139279502130664 1 0.531487882137299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78350171 chr17:78350175 synonymous SNV . 0 25 hm5C_associated_SNPs_12779 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:78350174-78350175
64251 chr17 78362500 78362500 1 + T C rs114649707 78362510 + 78362490 78362530 41 GTGATCCCGATAAACCTGATCCTGTGCACGGGGCTTTCTGC GTGATCCCGACAAACCTGATCCTGTGCACGGGGCTTTCTGC < 41bp 1 0.0118736652138005 1 0.0769124925136566 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC100294362 ENSG00000263069 ncRNA_intronic Human antisense chr17:78362510 chr17:78362500 . . 0 11 hm5C_associated_SNPs_12780 0 0 3 PRPF8 POSTAR2 ENCODE chr17:78362499-78362613
64251 chr17 78362518 78362518 1 + C T rs377349704 78362510 + 78362490 78362530 41 GTGATCCCGATAAACCTGATCCTGTGCACGGGGCTTTCTGC GTGATCCCGATAAACCTGATCCTGTGCATGGGGCTTTCTGC < 41bp 1 0.0111427905174659 1 0.0438079833984375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC100294362 ENSG00000263069 ncRNA_intronic Human antisense chr17:78362510 chr17:78362518 . . 0 29 hm5C_associated_SNPs_12781 0 0 3 PRPF8 POSTAR2 ENCODE chr17:78362499-78362613
64251 chr17 78704389 78704389 1 + A G rs181909860 78704396 + 78704376 78704416 41 TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGC TCCCTCTGTCCATGTATGACCTGCAGACGTGGATGGGCAGC < 41bp 1 0.516160747268663 1 0.309237509965897 experiment 0.967678505462675 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPTOR ENSG00000141564 CDS Human protein_coding chr17:78704396 chr17:78704389 nonsynonymous SNV 0.997 2 14 hm5C_associated_SNPs_12783 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:78704389-78704390
64251 chr17 78938783 78938783 1 + A G rs73359530 78938785 + 78938765 78938805 41 CAGCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCCGC CAGCATCACTGAGCAGGAGGCGCACAGCCCACCCTCCCCGC < 41bp 1 0.36505909714135 1 0.180076748132706 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938785 chr17:78938783 . . 0 19 hm5C_associated_SNPs_12784 0 0 2 SLTM POSTAR2 ENCODE chr17:78938740-78938840
64251 chr17 78938783 78938783 1 + A G rs73359530 78938787 + 78938767 78938807 41 GCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCCGCAC GCATCACTGAGCAGGAGGCGCACAGCCCACCCTCCCCGCAC < 41bp 1 0.571956544902329 1 0.288365721702576 experiment 0.856086910195342 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938787 chr17:78938783 . . 0 17 hm5C_associated_SNPs_12785 0 0 2 SLTM POSTAR2 ENCODE chr17:78938740-78938840
64251 chr17 78938803 78938803 1 + C T rs60558073 78938785 + 78938765 78938805 41 CAGCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCCGC CAGCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCTGC < 41bp 1 0.417699524307778 1 0.238872557878494 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938785 chr17:78938803 . . 0 39 hm5C_associated_SNPs_12786 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:78938784-78938819
64251 chr17 78938803 78938803 1 + C T rs60558073 78938787 + 78938767 78938807 41 GCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCCGCAC GCATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCTGCAC < 41bp 1 0.563722799113667 1 0.226308614015579 experiment 0.872554401772665 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938787 chr17:78938803 . . 0 37 hm5C_associated_SNPs_12787 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:78938784-78938819
64251 chr17 78938966 78938966 1 + G A rs566208205 78938976 + 78938956 78938996 41 CCCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTCTCCA CCCCACAGGCACGGGGACAGCAGCCCGACCTGTGGTCTCCA < 41bp 1 0.531875753773136 1 0.322697401046753 experiment 0.936248492453729 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938976 chr17:78938966 . . 0 11 hm5C_associated_SNPs_12788 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:78938942-78938974
64251 chr17 78938967 78938967 1 + C T rs533608881 78938976 + 78938956 78938996 41 CCCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTCTCCA CCCCACAGGCGTGGGGACAGCAGCCCGACCTGTGGTCTCCA < 41bp 1 0.515324953490794 1 0.431595474481583 experiment 0.969350093018413 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938976 chr17:78938967 . . 0 12 hm5C_associated_SNPs_12789 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:78938942-78938974
64251 chr17 78939964 78939964 1 + C T rs1045626 78939955 + 78939935 78939975 41 TCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCT TCCACCCTGGAGCCCACCCCCATGGGCACTGCGTGCCGCCT < 41bp 1 0.467560135458783 1 0.81573212146759 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78939955 chr17:78939964 . . 0 30 hm5C_associated_SNPs_12790 0 1 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:78939955-78939972
64251 chr17 79213403 79213403 1 + G T rs374420845 79213405 + 79213385 79213425 41 GTGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTA GTGCGTGCAGGCCTCCACTGCCCCGGGCGGCCGCCTGAGTA < 41bp 1 0.485909820628338 1 0.212707132101059 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213405 chr17:79213403 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_12792 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr17 79213403 79213403 1 + G T rs374420845 79213406 + 79213386 79213426 41 TGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTAA TGCGTGCAGGCCTCCACTGCCCCGGGCGGCCGCCTGAGTAA < 41bp 1 0.717004047764241 1 0.633678674697876 experiment 0.565991904471518 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213406 chr17:79213403 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_12793 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr17 79213403 79213403 1 + G T rs374420845 79213407 + 79213387 79213427 41 GCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTAAG GCGTGCAGGCCTCCACTGCCCCGGGCGGCCGCCTGAGTAAG < 41bp 1 0.728207232009535 1 0.405090063810349 experiment 0.543585535980931 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213407 chr17:79213403 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_12794 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr17 79213403 79213403 1 + G T rs374420845 79213408 + 79213388 79213428 41 CGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCTGAGTAAGG CGTGCAGGCCTCCACTGCCCCGGGCGGCCGCCTGAGTAAGG < 41bp 1 0.678142103914542 1 0.817249894142151 experiment 0.643715792170917 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213408 chr17:79213403 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_12795 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr17 79373580 79373580 1 + C G rs547318668 79373568 + 79373548 79373588 41 CCGCGACTTTGCGCCGCCGCCGCATCTGCTGTCGGAGCGCG CCGCGACTTTGCGCCGCCGCCGCATCTGCTGTGGGAGCGCG < 41bp 1 0.259775063228488 1 0.608698129653931 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BAHCC1 ENSG00000171282;ENSG00000263053 CDS Human other chr17:79373568 chr17:79373580 nonsynonymous SNV 0.981 3 33 hm5C_associated_SNPs_12796 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79373560-79373580
64251 chr17 79408924 79408924 1 + C T rs116138822 79408935 + 79408915 79408955 41 CTTCCCCAGCGTGGCCCGGGCCGCCCCTGCCCACCCCATGG CTTCCCCAGTGTGGCCCGGGCCGCCCCTGCCCACCCCATGG < 41bp 1 0.107210431002199 1 0.120653510093689 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79408935 chr17:79408924 synonymous SNV . 0 10 hm5C_associated_SNPs_12797 0 0 1 METAP2 POSTAR2 ENCODE chr17:79408885-79409026
64251 chr17 79409189 79409189 1 + G A rs12952981 79409170 + 79409150 79409190 41 GACGGGCACTGCAGGGAGGGCGGCCCCGCACCCCGAGGGGC GACGGGCACTGCAGGGAGGGCGGCCCCGCACCCCGAGGGAC < 41bp 1 0.254615658550788 1 0.370364725589752 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79409170 chr17:79409189 nonsynonymous SNV 0.124 0 40 hm5C_associated_SNPs_12799 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79409188-79409189
64251 chr17 79409189 79409189 1 + G A rs12952981 79409200 + 79409180 79409220 41 CCCCGAGGGGCCTGCGAGGGCCGCCCCAAGCACCTCACCTC CCCCGAGGGACCTGCGAGGGCCGCCCCAAGCACCTCACCTC < 41bp 1 0.112889829953882 1 0.065203845500946 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79409200 chr17:79409189 nonsynonymous SNV 0.124 0 10 hm5C_associated_SNPs_12800 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79409188-79409189
64251 chr17 79409189 79409189 1 + G A rs12952981 79409201 + 79409181 79409221 41 CCCGAGGGGCCTGCGAGGGCCGCCCCAAGCACCTCACCTCC CCCGAGGGACCTGCGAGGGCCGCCCCAAGCACCTCACCTCC < 41bp 1 0.155450753085269 1 0.399713397026062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79409201 chr17:79409189 nonsynonymous SNV 0.124 0 9 hm5C_associated_SNPs_12801 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79409188-79409189
64251 chr17 79409189 79409189 1 + G A rs12952981 79409203 + 79409183 79409223 41 CGAGGGGCCTGCGAGGGCCGCCCCAAGCACCTCACCTCCTG CGAGGGACCTGCGAGGGCCGCCCCAAGCACCTCACCTCCTG < 41bp 1 0.407643865928366 1 0.42812916636467 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79409203 chr17:79409189 nonsynonymous SNV 0.124 0 7 hm5C_associated_SNPs_12802 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79409188-79409189
64251 chr17 79409189 79409189 1 + G A rs12952981 79409204 + 79409184 79409224 41 GAGGGGCCTGCGAGGGCCGCCCCAAGCACCTCACCTCCTGC GAGGGACCTGCGAGGGCCGCCCCAAGCACCTCACCTCCTGC < 41bp 1 0.245669587733117 1 0.550740540027618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79409204 chr17:79409189 nonsynonymous SNV 0.124 0 6 hm5C_associated_SNPs_12803 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:79409188-79409189
64251 chr17 79418798 79418798 1 + G A rs368653379 79418808 + 79418788 79418828 41 CACTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCAGCG CACTGCCCCAACGCAGCCGCCCACAGCCAACCCCTGCAGCG < 41bp 1 0.14880829677415 1 0.0682482719421387 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BAHCC1 ENSG00000171282 CDS Human other chr17:79418808 chr17:79418798 nonsynonymous SNV 0.000 0 11 hm5C_associated_SNPs_12806 0 0 1 DDX6 POSTAR2 ENCODE chr17:79418774-79418834
64251 chr17 79425714 79425714 1 + G A rs200134076 79425696 + 79425676 79425716 41 GGCCACACGCAACGCCAAGGCCATCCTGGGGAAGGGCCGGA GGCCACACGCAACGCCAAGGCCATCCTGGGGAAGGGCCAGA < 41bp 1 0.0197054257039284 1 0.029114156961441 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79425696 chr17:79425714 nonsynonymous SNV 0.708 3 39 hm5C_associated_SNPs_12807 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:79425714-79425715
64251 chr17 79430878 79430878 1 + G A rs55902919 79430872 + 79430852 79430892 41 CCGCAGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCGG CCGCAGATGCCTCCCACGTGCGCCAGAGACCCTGTGTGCGG < 41bp 1 0.700492722881783 1 0.615150153636932 experiment 0.599014554236434 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BAHCC1 ENSG00000171282 UTR3 Human other chr17:79430872 chr17:79430878 . . 0 27 hm5C_associated_SNPs_12810 0 0 1 EIF3H POSTAR2 ENCODE chr17:79430878-79430937
64251 chr17 79430891 79430891 1 + G A rs182603135 79430872 + 79430852 79430892 41 CCGCAGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCGG CCGCAGATGCCTCCCACGTGCGCCAGGGACCCTGTGTGCAG < 41bp 1 0.706010309581956 1 0.457931786775589 experiment 0.587979380836087 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BAHCC1 ENSG00000171282 UTR3 Human other chr17:79430872 chr17:79430891 . . 0 40 hm5C_associated_SNPs_12811 0 0 1 EIF3H POSTAR2 ENCODE chr17:79430878-79430937
64251 chr17 79663479 79663479 1 + C T rs555406175 79663489 + 79663469 79663509 41 GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC GGAGAAGCTTTGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC < 41bp 1 0.67224463136624 1 0.848601400852203 experiment 0.655510737267521 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663489 chr17:79663479 nonsynonymous SNV 0.994 3 11 hm5C_associated_SNPs_12812 0 0 6 DDX24 POSTAR2 ENCODE chr17:79663407-79663529
64251 chr17 79663508 79663508 1 + G A rs534593378 79663489 + 79663469 79663509 41 GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAAC < 41bp 1 0.674226771218104 1 0.826051950454712 experiment 0.651546457563792 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663489 chr17:79663508 synonymous SNV . 0 40 hm5C_associated_SNPs_12813 0 0 8 DDX24 POSTAR2 ENCODE chr17:79663407-79663529
64251 chr17 79663771 79663771 1 + C T rs148583822 79663761 + 79663741 79663781 41 CGCGCAGATGCCCGCCTTCCCCCTGCCCTACGCCCAGGCAT CGCGCAGATGCCCGCCTTCCCCCTGCCCTATGCCCAGGCAT < 41bp 1 0.321511226334681 1 0.174337476491928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663761 chr17:79663771 synonymous SNV . 0 31 hm5C_associated_SNPs_12814 0 0 8 BUD13 POSTAR2 ENCODE chr17:79663715-79663780
64251 chr17 79663981 79663981 1 + C T rs187324452 79663977 + 79663957 79663997 41 TGCACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGC TGCACGGCGTGTACATGAGCCAGCTGGCCCCTGCCGCTGGC < 41bp 1 0.641070908884282 1 0.570172667503357 experiment 0.717858182231436 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663977 chr17:79663981 nonsynonymous SNV 0.433 1 25 hm5C_associated_SNPs_12815 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr17 79663981 79663981 1 + C T rs187324452 79663980 + 79663960 79664000 41 ACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGCCCC ACGGCGTGTACATGAGCCAGCTGGCCCCTGCCGCTGGCCCC < 41bp 1 0.609624216742437 1 0.31233686208725 experiment 0.780751566515125 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663980 chr17:79663981 nonsynonymous SNV 0.433 1 22 hm5C_associated_SNPs_12816 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr17 79668135 79668135 1 + G T rs56058441 79668148 + 79668128 79668168 41 CTACATCGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC CTACATCTCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC < 41bp 1 0.196904735536253 1 0.419178783893585 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79668148 chr17:79668135 nonsynonymous SNV 0.106 0 8 hm5C_associated_SNPs_12817 0 0 3 DDX24 POSTAR2 ENCODE chr17:79668104-79668161
64251 chr17 79671714 79671714 1 + T C rs11546280 79671721 + 79671701 79671741 41 GGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC GGGTGGTGTGATGCCTGGGGCTGTCCCTGCTGCAGCAGCCC < 41bp 1 0.110583062504823 1 0.0519255697727203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671721 chr17:79671714 nonsynonymous SNV 0.023 0 14 hm5C_associated_SNPs_12818 1 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79671662-79671723
64251 chr17 79852322 79852322 1 + G A rs370106520 79852334 + 79852314 79852354 41 AGCCAGTCGTCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCA AGCCAGTCATCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCA < 41bp 1 0.133069553837896 1 0.470676839351654 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANAPC11 ENSG00000141552 UTR5 Human protein_coding chr17:79852334 chr17:79852322 . . 0 9 hm5C_associated_SNPs_12819 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:79852277-79852326
64251 chr17 79852322 79852322 1 + G A rs370106520 79852337 + 79852317 79852357 41 CAGTCGTCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCATGA CAGTCATCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCATGA < 41bp 1 0.229006410117469 1 0.405149519443512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANAPC11 ENSG00000141552 UTR5 Human protein_coding chr17:79852337 chr17:79852322 . . 0 6 hm5C_associated_SNPs_12820 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:79852277-79852326
64251 chr17 79852339 79852339 1 + G A rs145009430 79852334 + 79852314 79852354 41 AGCCAGTCGTCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCA AGCCAGTCGTCCTGTTCCCTCCGCCACAGGCTCTGCTGCCA < 41bp 1 0.131475498865237 1 0.654621839523315 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANAPC11 ENSG00000141552 UTR5 Human protein_coding chr17:79852334 chr17:79852339 . . 0 26 hm5C_associated_SNPs_12823 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:79852339-79852340
64251 chr17 79852339 79852339 1 + G A rs145009430 79852337 + 79852317 79852357 41 CAGTCGTCCTGTTCCCTCCGCCGCAGGCTCTGCTGCCATGA CAGTCGTCCTGTTCCCTCCGCCACAGGCTCTGCTGCCATGA < 41bp 1 0.141987771161751 1 0.280246675014496 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANAPC11 ENSG00000141552 UTR5 Human protein_coding chr17:79852337 chr17:79852339 . . 0 23 hm5C_associated_SNPs_12824 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:79852339-79852340
64251 chr17 79887574 79887574 1 + A C rs534064452 79887562 + 79887542 79887582 41 GGGATACTGCGAGAGAGGCCCACAGGTTTCCAAGCATCCCT GGGATACTGCGAGAGAGGCCCACAGGTTTCCACGCATCCCT < 41bp 1 0.506866572833422 1 0.59459662437439 experiment 0.986266854333156 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAFG-AS1 ENSG00000265688 ncRNA_exonic Human antisense chr17:79887562 chr17:79887574 . . 0 33 hm5C_associated_SNPs_12826 0 0 1 RBM15 POSTAR2 ENCODE chr17:79887570-79887613
64251 chr17 80193928 80193928 1 + C G rs144588703 80193913 + 80193893 80193933 41 GGCCGTGGTGGACGAGGGCCCCACAGGCGTCAAGGCCCCTG GGCCGTGGTGGACGAGGGCCCCACAGGCGTCAAGGGCCCTG < 41bp 1 0.620538945485496 1 0.0620055496692657 experiment 0.758922109029007 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC16A3 ENSG00000141526;ENSG00000141526 exonic;splicing Human other chr17:80193913 chr17:80193928 nonsynonymous SNV 0.679 2 36 hm5C_associated_SNPs_12827 0 0 5 DDX3X POSTAR2 ENCODE chr17:80193875-80193962
64251 chr17 80442218 80442218 1 + G A rs537825663 80442212 + 80442192 80442232 41 CCCAGGTGCTGCATTCGTGCCCTTTTGGGGGAAGGTAAGAT CCCAGGTGCTGCATTCGTGCCCTTTTAGGGGAAGGTAAGAT < 41bp 1 0.0231770702739126 1 0.070751965045929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NARF ENSG00000141562 intronic Human protein_coding chr17:80442212 chr17:80442218 . . 0 27 hm5C_associated_SNPs_12828 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:80442206-80442229
64251 chr17 80529614 80529614 1 + G A rs117692271 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CACCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG < 41bp 1 0.0766952000192322 1 0.0701687932014465 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529614 synonymous SNV . 0 2 hm5C_associated_SNPs_12829 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:80529603-80529627
64251 chr17 80544015 80544015 1 + A T rs188729988 80544032 + 80544012 80544052 41 GGCAGCCGTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGA GGCTGCCGTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGA < 41bp 1 0.455748064574641 1 0.746717572212219 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544032 chr17:80544015 synonymous SNV . 0 4 hm5C_associated_SNPs_12830 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80543975-80544024
64251 chr17 80544018 80544018 1 + C T rs11558342 80544032 + 80544012 80544052 41 GGCAGCCGTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGA GGCAGCTGTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGA < 41bp 1 0.418117781693554 1 0.757814168930054 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544032 chr17:80544018 synonymous SNV . 0 7 hm5C_associated_SNPs_12831 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80543975-80544024
64251 chr17 80559252 80559252 1 + C T rs35881749 80559263 + 80559243 80559283 41 GCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC GCGCCACAATGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC < 41bp 1 0.740512317644083 1 0.865359306335449 experiment 0.518975364711834 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559263 chr17:80559252 synonymous SNV . 0 10 hm5C_associated_SNPs_12833 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559252 80559252 1 + C T rs35881749 80559268 + 80559248 80559288 41 ACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC ACAATGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC < 41bp 1 0.253035510383254 1 0.400786817073822 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559268 chr17:80559252 synonymous SNV . 0 5 hm5C_associated_SNPs_12834 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559266 80559266 1 + A C rs35659703 80559263 + 80559243 80559283 41 GCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC GCGCCACAACGGTGACCAGCCGGCGCAGCCGGAGCTGAAGC < 41bp 1 0.789873536089462 1 0.906006753444672 experiment 0.420252927821077 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559263 chr17:80559266 nonsynonymous SNV 0.069 2 24 hm5C_associated_SNPs_12835 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559266 80559266 1 + A C rs35659703 80559268 + 80559248 80559288 41 ACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC ACAACGGTGACCAGCCGGCGCAGCCGGAGCTGAAGCGGATC < 41bp 1 0.260609093870502 1 0.340181291103363 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559268 chr17:80559266 nonsynonymous SNV 0.069 2 19 hm5C_associated_SNPs_12836 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559266 80559266 1 + A C rs35659703 80559277 + 80559257 80559297 41 ACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAA ACCAGCCGGCGCAGCCGGAGCTGAAGCGGATCAAGACAGAA < 41bp 1 0.621823136522008 1 0.486319988965988 experiment 0.756353726955984 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559277 chr17:80559266 nonsynonymous SNV 0.069 2 10 hm5C_associated_SNPs_12837 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559272 80559272 1 + C T rs35832203 80559263 + 80559243 80559283 41 GCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC GCGCCACAACGGTGACCAGCCGGAGCAGCTGGAGCTGAAGC < 41bp 1 0.703967621095882 1 0.850221633911133 experiment 0.592064757808236 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559263 chr17:80559272 nonsynonymous SNV 0.047 3 30 hm5C_associated_SNPs_12838 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559272 80559272 1 + C T rs35832203 80559268 + 80559248 80559288 41 ACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC ACAACGGTGACCAGCCGGAGCAGCTGGAGCTGAAGCGGATC < 41bp 1 0.340273880728364 1 0.52760374546051 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559268 chr17:80559272 nonsynonymous SNV 0.047 3 25 hm5C_associated_SNPs_12839 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559272 80559272 1 + C T rs35832203 80559277 + 80559257 80559297 41 ACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAA ACCAGCCGGAGCAGCTGGAGCTGAAGCGGATCAAGACAGAA < 41bp 1 0.600263007473499 1 0.476087301969528 experiment 0.799473985053001 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559277 chr17:80559272 nonsynonymous SNV 0.047 3 16 hm5C_associated_SNPs_12840 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559291 80559291 1 + G C rs117690256 80559277 + 80559257 80559297 41 ACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAA ACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAACACAGAA < 41bp 1 0.600705164931579 1 0.629766225814819 experiment 0.798589670136842 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559277 chr17:80559291 nonsynonymous SNV 0.002 4 35 hm5C_associated_SNPs_12841 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559729 80559729 1 + C T rs149691901 80559745 + 80559725 80559765 41 GACGCGGGGGGAGCCATCCCCGCCGCCCTCACAGGACCCAC GACGTGGGGGGAGCCATCCCCGCCGCCCTCACAGGACCCAC < 41bp 1 0.728102653827798 1 0.697665512561798 experiment 0.543794692344403 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FOXK2 ENSG00000141568 UTR3 Human protein_coding chr17:80559745 chr17:80559729 . . 0 5 hm5C_associated_SNPs_12842 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:80559620-80559740
64251 chr17 80680760 80680760 1 + C A rs191683466 80680754 + 80680734 80680774 41 TGGTGACGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGG TGGTGACGTGCTGTGGATACCTCCCCAAGGTGAGTGCACGG < 41bp 1 0.483227080955001 1 0.476396709680557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680754 chr17:80680760 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_12843 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80680730-80680765
64251 chr17 80888252 80888252 1 + G A rs141244531 80888270 + 80888250 80888290 41 CCGCACCAGCCGCTTGGGGCCAGACCTTCGCGTCTCTGCAG CCACACCAGCCGCTTGGGGCCAGACCTTCGCGTCTCTGCAG < 41bp 1 0.200869844885057 1 0.389008074998856 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control TBCD ENSG00000141556 intronic Human protein_coding chr17:80888270 chr17:80888252 . . 0 3 hm5C_associated_SNPs_12844 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:80888252-80888275
64251 chr17 80888272 80888272 1 + G A rs6502016 80888270 + 80888250 80888290 41 CCGCACCAGCCGCTTGGGGCCAGACCTTCGCGTCTCTGCAG CCGCACCAGCCGCTTGGGGCCAAACCTTCGCGTCTCTGCAG < 41bp 1 0.117989802358878 1 0.215238571166992 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control TBCD ENSG00000141556 intronic Human protein_coding chr17:80888270 chr17:80888272 . . 0 23 hm5C_associated_SNPs_12845 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr17:80888252-80888275
64251 chr17 81042978 81042978 1 + C T rs62074705 81042993 + 81042973 81043013 41 CTTCACGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAA CTTCATGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAA < 41bp 1 0.042452403237091 1 0.0775199830532074 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METRNL ENSG00000176845 CDS Human protein_coding chr17:81042993 chr17:81042978 nonsynonymous SNV 0.951 0 6 hm5C_associated_SNPs_12846 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:81042914-81042985
64251 chr17 81052423 81052423 1 + G A rs8269 81052422 + 81052402 81052442 41 GGGCCGCGCGCTGGGAGCCGCGTGCCCTGGGCCCAGGCCTG GGGCCGCGCGCTGGGAGCCGCATGCCCTGGGCCCAGGCCTG < 41bp 1 0.579757299588827 1 0.557981252670288 experiment 0.840485400822346 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METRNL ENSG00000176845 UTR3 Human protein_coding chr17:81052422 chr17:81052423 . . 0 22 hm5C_associated_SNPs_12848 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:81052415-81052449
64251 chr18 2656224 2656224 1 + C G rs139872818 2656205 + 2656185 2656225 41 GTCCGAGCTCGGGGACCGGCCTCTGCAGGTCGGGGAGCGCT GTCCGAGCTCGGGGACCGGCCTCTGCAGGTCGGGGAGCGGT < 41bp 1 0.480306826010291 1 0.770797848701477 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2656205 chr18:2656224 synonymous SNV . 0 40 hm5C_associated_SNPs_12852 1 0 7 DGCR8 POSTAR2 ENCODE chr18:2656205-2656247
64251 chr18 2667005 2667005 1 + T C rs7239096 2667024 + 2667004 2667044 41 ATGCCAGTGAAGGACAAAATCCTTTGCGTAAGTATCCCATT ACGCCAGTGAAGGACAAAATCCTTTGCGTAAGTATCCCATT < 41bp 1 0.0616845924451651 1 0.125531107187271 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2667024 chr18:2667005 synonymous SNV . 0 2 hm5C_associated_SNPs_12853 1 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr18:2666979-2667006
64251 chr18 2906950 2906950 1 + G A rs573074521 2906947 + 2906927 2906967 41 CCCCAGCCGCCAGGCTCCACCGGGGTCATCGCGGAGACGGG CCCCAGCCGCCAGGCTCCACCGGAGTCATCGCGGAGACGGG < 41bp 1 0.746319084088047 1 0.920531392097473 experiment 0.507361831823906 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMILIN2 ENSG00000132205 CDS Human protein_coding chr18:2906947 chr18:2906950 synonymous SNV . 0 24 hm5C_associated_SNPs_12854 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr18:2906941-2906963
64251 chr18 3457606 3457606 1 + C T rs4468717 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATCCTCGGGATCAGTTTTGGCTCGTCCATCAG < 41bp 1 0.312028830287596 1 0.0570854544639587 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457606 nonsynonymous SNV 0.014 1 14 hm5C_associated_SNPs_12855 2 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457606 3457606 1 + C T rs4468717 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCCTCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.619741277990289 1 0.239834308624268 experiment 0.760517444019421 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457606 nonsynonymous SNV 0.014 1 5 hm5C_associated_SNPs_12856 2 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457607 3457607 1 + C G rs2229333 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATCCCGGGGATCAGTTTTGGCTCGTCCATCAG < 41bp 1 0.316979551275135 1 0.0663745105266571 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457607 nonsynonymous SNV 0.014 4 15 hm5C_associated_SNPs_12857 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457607 3457607 1 + C G rs2229333 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCCCGGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.663346985089614 1 0.248039811849594 experiment 0.673306029820771 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457607 nonsynonymous SNV 0.014 4 6 hm5C_associated_SNPs_12858 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457608 3457608 1 + G A rs2229334 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATCCCCAGGATCAGTTTTGGCTCGTCCATCAG < 41bp 1 0.305421672571125 1 0.0299418568611145 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457608 synonymous SNV . 0 16 hm5C_associated_SNPs_12859 1 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457608 3457608 1 + G A rs2229334 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCCCCAGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.654826912321309 1 0.150683224201202 experiment 0.690346175357383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457608 synonymous SNV . 0 7 hm5C_associated_SNPs_12860 1 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 8830127 8830127 1 + G A rs192826756 8830135 + 8830115 8830155 41 ATTTCCCAAACCGTGTGTCCCAGTCAAGCACTGTGGGCTGC ATTTCCCAAACCATGTGTCCCAGTCAAGCACTGTGGGCTGC < 41bp 1 0.0907569921090811 1 0.255323171615601 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTCL1 ENSG00000168502 intronic Human protein_coding chr18:8830135 chr18:8830127 . . 0 13 hm5C_associated_SNPs_12872 0 0 1 AGGF1 POSTAR2 ENCODE chr18:8830062-8830131
64251 chr18 9257502 9257502 1 + G A rs562592238 9257488 + 9257468 9257508 41 TCCAGTGCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCC TCCAGTGCATTTAGAGCCATCTAGTCAGGTTGGTATGATCC < 41bp 1 0.261455496129101 1 0.212298691272736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9257488 chr18:9257502 nonsynonymous SNV 0.997 0 35 hm5C_associated_SNPs_12873 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:9257476-9257508
64251 chr18 9536968 9536968 1 + C G rs182972888 9536959 + 9536939 9536979 41 TTTGAATGATAGCTGTGATTCACCCCACCCCATTTTCTTGT TTTGAATGATAGCTGTGATTCACCCCACCGCATTTTCTTGT < 41bp 1 0.297041670830062 1 0.20442071557045 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RALBP1 ENSG00000017797 UTR3 Human protein_coding chr18:9536959 chr18:9536968 . . 0 30 hm5C_associated_SNPs_12874 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr18:9536922-9536996
64251 chr18 9861996 9861996 1 + G A rs184082467 9862005 + 9861985 9862025 41 TTGAATATGACGTTACCTTGCAGACTAAAAGGTTGAAGGCC TTGAATATGACATTACCTTGCAGACTAAAAGGTTGAAGGCC < 41bp 1 0.379420010915728 1 0.468674927949905 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9862005 chr18:9861996 . . 0 12 hm5C_associated_SNPs_12875 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:9861973-9862007
64251 chr18 9954107 9954107 1 + A G rs200828821 9954099 + 9954079 9954119 41 ACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCA ACATTCGGATAAACCTGGATCAACCTCAGCTGCATCCTTCA < 41bp 1 0.256590997373356 1 0.239821881055832 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VAPA ENSG00000101558 CDS Human protein_coding chr18:9954099 chr18:9954107 nonsynonymous SNV 0.893 0 29 hm5C_associated_SNPs_12876 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067861 chr18:9954077-9954115
64251 chr18 11981742 11981742 1 + A G rs578206973 11981736 + 11981716 11981756 41 GGAGGAGTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGG GGAGGAGTGCTTCCAGGCGGCCGTGCGGCTGGCGCTGCGGG < 41bp 1 0.381705174186054 1 0.685281693935394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IMPA2 ENSG00000141401 CDS Human protein_coding chr18:11981736 chr18:11981742 nonsynonymous SNV 0.914 0 27 hm5C_associated_SNPs_12877 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr18:11981724-11981750
64251 chr18 11981742 11981742 1 + A G rs578206973 11981737 + 11981717 11981757 41 GAGGAGTGCTTCCAGGCGGCCGTGCAGCTGGCGCTGCGGGC GAGGAGTGCTTCCAGGCGGCCGTGCGGCTGGCGCTGCGGGC < 41bp 1 0.500192804751288 1 0.53234452009201 experiment 0.999614390497424 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IMPA2 ENSG00000141401 CDS Human protein_coding chr18:11981737 chr18:11981742 nonsynonymous SNV 0.914 0 26 hm5C_associated_SNPs_12878 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr18:11981724-11981750
64251 chr18 12308243 12308243 1 + T A rs8087840 12308255 + 12308235 12308275 41 CCCGCAGTTGCCGCTGTCGTCCGCAGAGCCAGTTCCTAGCG CCCGCAGTAGCCGCTGTCGTCCGCAGAGCCAGTTCCTAGCG < 41bp 1 0.79629942552889 1 0.598721325397491 experiment 0.407401148942219 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TUBB6 ENSG00000176014 UTR5 Human protein_coding chr18:12308255 chr18:12308243 . . 0 9 hm5C_associated_SNPs_12879 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr18:12308240-12308260
64251 chr18 12308273 12308273 1 + G A rs11548177 12308255 + 12308235 12308275 41 CCCGCAGTTGCCGCTGTCGTCCGCAGAGCCAGTTCCTAGCG CCCGCAGTTGCCGCTGTCGTCCGCAGAGCCAGTTCCTAACG < 41bp 1 0.776633247614107 1 0.586775302886963 experiment 0.446733504771786 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TUBB6 ENSG00000176014 UTR5 Human protein_coding chr18:12308255 chr18:12308273 . . 0 39 hm5C_associated_SNPs_12880 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr18:12308240-12308280
64251 chr18 12329239 12329239 1 - G A rs550591123 12329254 - 12329234 12329274 41 CACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATCGTTGC CACCAAGTGGGGTCGGCTGACCGTGTGGCAGGGATTGTTGC < 41bp 1 0.640629674295925 1 0.347584128379822 experiment 0.718740651408151 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFG3L2;TUBB6 ENSG00000141385;ENSG00000176014 UTR3 Human other chr18:12329254 chr18:12329239 . . 0 36 hm5C_associated_SNPs_12881 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:12329196-12329245
64251 chr18 12658600 12658600 1 + A G rs1062235 12658585 + 12658565 12658605 41 TTCCCTAGGCGCTGGATCGCCGAAGGTCTGGTTGAAAACTT TTCCCTAGGCGCTGGATCGCCGAAGGTCTGGTTGAGAACTT < 41bp 1 0.690575363782454 1 0.742937982082367 experiment 0.618849272435092 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMG2;SPIRE1 ENSG00000215527 CDS Human other chr18:12658585 chr18:12658600 synonymous SNV . 0 36 hm5C_associated_SNPs_12882 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:12658600-12658627
64251 chr18 12703051 12703051 1 + T C rs80236912 12703065 + 12703045 12703085 41 TCTTGCTGCCCTCGTTCTTGCCAGGGCCGCGGTTAGTCCCT TCTTGCCGCCCTCGTTCTTGCCAGGGCCGCGGTTAGTCCCT < 41bp 1 0.726538806448081 1 0.552233099937439 experiment 0.546922387103837 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 UTR5 Human protein_coding chr18:12703065 chr18:12703051 . . 0 7 hm5C_associated_SNPs_12883 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr18:12703040-12703080
64251 chr18 12703055 12703055 1 + C T rs144068611 12703065 + 12703045 12703085 41 TCTTGCTGCCCTCGTTCTTGCCAGGGCCGCGGTTAGTCCCT TCTTGCTGCCTTCGTTCTTGCCAGGGCCGCGGTTAGTCCCT < 41bp 1 0.679523364968569 1 0.454878896474838 experiment 0.640953270062862 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 UTR5 Human protein_coding chr18:12703065 chr18:12703055 . . 0 11 hm5C_associated_SNPs_12884 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819216 chr18:12703040-12703080
64251 chr18 12703067 12703067 1 + A G rs3809916 12703065 + 12703045 12703085 41 TCTTGCTGCCCTCGTTCTTGCCAGGGCCGCGGTTAGTCCCT TCTTGCTGCCCTCGTTCTTGCCGGGGCCGCGGTTAGTCCCT < 41bp 1 0.794284133228844 1 0.892724215984344 experiment 0.411431733542313 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 UTR5 Human protein_coding chr18:12703065 chr18:12703067 . . 0 23 hm5C_associated_SNPs_12885 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr18:12703040-12703080
64251 chr18 13056022 13056022 1 + G A rs139880560 13056028 + 13056008 13056048 41 CTTCCTCCAAAAGTGGAAATCTGTTGGAAACCAGTGAGGTA CTTCCTCCAAAAGTAGAAATCTGTTGGAAACCAGTGAGGTA < 41bp 1 0.179500197384478 1 0.238342732191086 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056028 chr18:13056022 nonsynonymous SNV 0.439 0 15 hm5C_associated_SNPs_12887 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056001-13056039
64251 chr18 13056046 13056046 1 + G A rs141618343 13056028 + 13056008 13056048 41 CTTCCTCCAAAAGTGGAAATCTGTTGGAAACCAGTGAGGTA CTTCCTCCAAAAGTGGAAATCTGTTGGAAACCAGTGAGATA < 41bp 1 0.165770231444096 1 0.18908354640007 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056028 chr18:13056046 nonsynonymous SNV 0.001 0 39 hm5C_associated_SNPs_12888 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13056020-13056058
64251 chr18 13056666 13056666 1 + A G rs139404667 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAGCCAT < 41bp 1 0.128188474549349 1 0.209128975868225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056666 synonymous SNV . 0 37 hm5C_associated_SNPs_12889 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr18 13056666 13056666 1 + A G rs139404667 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTGTTGGTACAAACTGTGGAATTGAGCCATGGGA < 41bp 1 0.324350236662257 1 0.149454295635223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056666 synonymous SNV . 0 33 hm5C_associated_SNPs_12890 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr18 13057655 13057655 1 + C G rs61740922 13057639 + 13057619 13057659 41 CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCCTCAG CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCGTCAG < 41bp 1 0.308382358144438 1 0.1302330493927 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13057639 chr18:13057655 nonsynonymous SNV 0.970 4 37 hm5C_associated_SNPs_12891 0 0 1 FXR2 POSTAR2 ENCODE chr18:13057609-13057701
64251 chr18 13057658 13057658 1 + A C rs141758949 13057639 + 13057619 13057659 41 CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCCTCAG CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCCTCCG < 41bp 1 0.298998088489206 1 0.133866518735886 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13057639 chr18:13057658 nonsynonymous SNV 0.941 4 40 hm5C_associated_SNPs_12892 0 0 1 FXR2 POSTAR2 ENCODE chr18:13057609-13057701
64251 chr18 13067905 13067905 1 + T C rs150357881 13067893 + 13067873 13067913 41 CTTATGGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC CTTATGGAGGCTGGAAAGCCCTCCCACTAAAACTGATAAAC < 41bp 1 0.285153016649704 1 0.375934422016144 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13067893 chr18:13067905 synonymous SNV . 0 33 hm5C_associated_SNPs_12893 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr18:13067886-13067907
64251 chr18 13095654 13095654 1 + A G rs79702541 13095653 + 13095633 13095673 41 CGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT CGTGGACTGTCCTACCCGAGCGCTTGATTCTGGTAGCTCCT < 41bp 1 0.211410962957357 1 0.232764035463333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095653 chr18:13095654 nonsynonymous SNV 0.132 0 22 hm5C_associated_SNPs_12894 0 0 2 FMR1 POSTAR2 ENCODE chr18:13095587-13095680
64251 chr18 13095654 13095654 1 + A G rs79702541 13095655 + 13095635 13095675 41 TGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC TGGACTGTCCTACCCGAGCGCTTGATTCTGGTAGCTCCTTC < 41bp 1 0.553290076721899 1 0.236833572387695 experiment 0.893419846556202 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095655 chr18:13095654 nonsynonymous SNV 0.132 0 20 hm5C_associated_SNPs_12895 0 0 2 FMR1 POSTAR2 ENCODE chr18:13095587-13095680
64251 chr18 13760008 13760008 1 + T C rs76766210 13760006 + 13759986 13760026 41 GGCAGTAGTCCCAGAGGGGCCGTGTTCTGTCCTGCACAAAT GGCAGTAGTCCCAGAGGGGCCGCGTTCTGTCCTGCACAAAT < 41bp 1 0.643092052349602 1 0.673160791397095 experiment 0.713815895300795 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNMT ENSG00000101654 UTR3 Human protein_coding chr18:13760006 chr18:13760008 . . 0 23 hm5C_associated_SNPs_12897 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:13760008-13760040
64251 chr18 19209087 19209087 1 + T A rs567962074 19209067 + 19209047 19209087 41 GAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGGT GAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGGA < 41bp 1 0.741200046394902 1 0.377096056938171 experiment 0.517599907210196 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209067 chr18:19209087 synonymous SNV . 0 41 hm5C_associated_SNPs_12898 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:19209058-19209166
64251 chr18 19444661 19444661 1 + A C rs76056004 19444676 + 19444656 19444696 41 AATGTATCTAGTCATGAGATCTTAATAGGCTTTTGATCTAG AATGTCTCTAGTCATGAGATCTTAATAGGCTTTTGATCTAG < 41bp 1 0.162479627739885 1 0.293376445770264 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MIB1 ENSG00000101752 UTR3 Human protein_coding chr18:19444676 chr18:19444661 . . 0 6 hm5C_associated_SNPs_12899 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:19444584-19444672
64251 chr18 20513338 20513338 1 + G A rs7244973 20513350 + 20513330 20513370 41 CCGCCTCCGAGCCCGGCCGGCAGCCCCCGGCCTTAAAGCGC CCGCCTCCAAGCCCGGCCGGCAGCCCCCGGCCTTAAAGCGC < 41bp 1 0.462830607050694 1 0.22686043381691 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513350 chr18:20513338 . . 0 9 hm5C_associated_SNPs_12901 2 0 2 DDX3X POSTAR2 ENCODE chr18:20513309-20513362
64251 chr18 20513350 20513350 1 + C A rs142828641 20513370 + 20513350 20513390 41 CAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAGGGGTCGG AAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAGGGGTCGG < 41bp 1 0.72480140299116 1 0.680691361427307 experiment 0.550397194017681 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513370 chr18:20513350 . . 0 1 hm5C_associated_SNPs_12902 0 0 2 DDX3X POSTAR2 ENCODE chr18:20513309-20513362
64251 chr18 20513376 20513376 1 + G A rs115479920 20513370 + 20513350 20513390 41 CAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAGGGGTCGG CAGCCCCCGGCCTTAAAGCGCGGGCTATCCGGAGGGGTCGG < 41bp 1 0.715806096865894 1 0.714988112449646 experiment 0.568387806268213 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513370 chr18:20513376 . . 0 27 hm5C_associated_SNPs_12903 2 0 9 SSB POSTAR2 GSE95683,GSM2521600 chr18:20513360-20513380
64251 chr18 20513377 20513377 1 + T C rs561516318 20513370 + 20513350 20513390 41 CAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAGGGGTCGG CAGCCCCCGGCCTTAAAGCGCGGGCTGCCCGGAGGGGTCGG < 41bp 1 0.745766195660071 1 0.74668288230896 experiment 0.508467608679858 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513370 chr18:20513377 . . 0 28 hm5C_associated_SNPs_12904 0 0 9 SSB POSTAR2 GSE95683,GSM2521600 chr18:20513360-20513380
64251 chr18 20513383 20513383 1 + G A rs530533933 20513370 + 20513350 20513390 41 CAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAGGGGTCGG CAGCCCCCGGCCTTAAAGCGCGGGCTGTCCGGAAGGGTCGG < 41bp 1 0.697712045313299 1 0.695440411567688 experiment 0.604575909373401 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MIR4741 ENSG00000264817 ncRNA_exonic Human other chr18:20513370 chr18:20513383 . . 0 34 hm5C_associated_SNPs_12905 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:20513364-20513426
64251 chr18 20573434 20573434 1 + T C rs34780140 20573447 + 20573427 20573467 41 CCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATC CCAAAGACTCCCCAGGGGAGCCCTGTTCACAGGAATGCATC < 41bp 1 0.171082155211096 1 0.0348386764526367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBBP8 ENSG00000101773 CDS Human protein_coding chr18:20573447 chr18:20573434 synonymous SNV . 0 8 hm5C_associated_SNPs_12906 3 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:20573419-20573496
64251 chr18 20837568 20837568 1 + A G rs547255499 20837574 + 20837554 20837594 41 TGTGCTGAGAACAGAGAGGCCCTGCCCTCTGTCCACTAGCG TGTGCTGAGAACAGGGAGGCCCTGCCCTCTGTCCACTAGCG < 41bp 1 0.0768871848290845 1 0.0602234899997711 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CABLES1 ENSG00000266495 ncRNA_intronic Human antisense chr18:20837574 chr18:20837568 . . 0 15 hm5C_associated_SNPs_12908 0 0 1 IGF2BP1 POSTAR2 ENCODE chr18:20837478-20837600
64251 chr18 20837591 20837591 1 + A G rs567234377 20837574 + 20837554 20837594 41 TGTGCTGAGAACAGAGAGGCCCTGCCCTCTGTCCACTAGCG TGTGCTGAGAACAGAGAGGCCCTGCCCTCTGTCCACTGGCG < 41bp 1 0.0771441403246219 1 0.0555185377597809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CABLES1 ENSG00000266495 ncRNA_intronic Human antisense chr18:20837574 chr18:20837591 . . 0 38 hm5C_associated_SNPs_12909 0 0 1 IGF2BP1 POSTAR2 ENCODE chr18:20837478-20837600
64251 chr18 21508192 21508192 1 + G A rs146634036 21508180 + 21508160 21508200 41 AATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGACTG AATGATACTGTGGGAGTAACCAAAAAGTGCTCAGAAGACTG < 41bp 1 0.42401681514297 1 0.743930816650391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21508180 chr18:21508192 synonymous SNV . 0 33 hm5C_associated_SNPs_12910 2 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:21508155-21508194
64251 chr18 21594977 21594977 1 + T A rs548200876 21594978 + 21594958 21594998 41 CAACAACGGCTTCAGGGAGTCGGACCAGCTTTTCAAACAAT CAACAACGGCTTCAGGGAGACGGACCAGCTTTTCAAACAAT < 41bp 1 0.227344201557504 1 0.472558230161667 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control TTC39C ENSG00000168234 CDS Human protein_coding chr18:21594978 chr18:21594977 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_12911 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:21594961-21594991
64251 chr18 29672035 29672035 1 + G A rs187700507 29672027 + 29672007 29672047 41 ACCATGAGCCTCGGCTCCGGCCCCGTTAGGGGCCGATAAGC ACCATGAGCCTCGGCTCCGGCCCCGTTAAGGGCCGATAAGC < 41bp 1 0.524647899104721 1 0.261185020208359 experiment 0.950704201790558 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672027 chr18:29672035 . . 0 29 hm5C_associated_SNPs_12914 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 29672035 29672035 1 + G A rs187700507 29672028 + 29672008 29672048 41 CCATGAGCCTCGGCTCCGGCCCCGTTAGGGGCCGATAAGCA CCATGAGCCTCGGCTCCGGCCCCGTTAAGGGCCGATAAGCA < 41bp 1 0.419901929780888 1 0.0958119034767151 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672028 chr18:29672035 . . 0 28 hm5C_associated_SNPs_12915 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 29672035 29672035 1 + G A rs187700507 29672029 + 29672009 29672049 41 CATGAGCCTCGGCTCCGGCCCCGTTAGGGGCCGATAAGCAC CATGAGCCTCGGCTCCGGCCCCGTTAAGGGCCGATAAGCAC < 41bp 1 0.346821796221736 1 0.136725127696991 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672029 chr18:29672035 . . 0 27 hm5C_associated_SNPs_12916 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 29672035 29672035 1 + G A rs187700507 29672030 + 29672010 29672050 41 ATGAGCCTCGGCTCCGGCCCCGTTAGGGGCCGATAAGCACA ATGAGCCTCGGCTCCGGCCCCGTTAAGGGCCGATAAGCACA < 41bp 1 0.542695705298689 1 0.256469041109085 experiment 0.914608589402623 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672030 chr18:29672035 . . 0 26 hm5C_associated_SNPs_12917 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 29672035 29672035 1 + G A rs187700507 29672039 + 29672019 29672059 41 GGCTCCGGCCCCGTTAGGGGCCGATAAGCACAGCGCACGCC GGCTCCGGCCCCGTTAAGGGCCGATAAGCACAGCGCACGCC < 41bp 1 0.485226389118575 1 0.103869557380676 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672039 chr18:29672035 . . 0 17 hm5C_associated_SNPs_12918 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 29672035 29672035 1 + G A rs187700507 29672040 + 29672020 29672060 41 GCTCCGGCCCCGTTAGGGGCCGATAAGCACAGCGCACGCCG GCTCCGGCCCCGTTAAGGGCCGATAAGCACAGCGCACGCCG < 41bp 1 0.711234413953615 1 0.159979552030563 experiment 0.57753117209277 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29672040 chr18:29672035 . . 0 16 hm5C_associated_SNPs_12919 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29672014-29672051
64251 chr18 33709875 33709875 1 + G C rs114190281 33709886 + 33709866 33709906 41 CTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCAC CTCTTGTTTCTGCGGCTGACCAGTTGGCGACATGGTGGCAC < 41bp 1 0.523204252291106 1 0.672416746616364 experiment 0.953591495417788 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ELP2 ENSG00000134759 UTR5 Human protein_coding chr18:33709886 chr18:33709875 . . 0 10 hm5C_associated_SNPs_12920 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:33709870-33709917
64251 chr18 33780013 33780013 1 + C A rs77632154 33780019 + 33779999 33780039 41 AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGG AGGTCAAGTCTGGGAGGTTGCACCCTGTGAGCACGCCTGGG < 41bp 1 0.660144960907937 1 0.148893147706985 experiment 0.679710078184127 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780019 chr18:33780013 synonymous SNV . 0 15 hm5C_associated_SNPs_12921 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780013 33780013 1 + C A rs77632154 33780021 + 33780001 33780041 41 GTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAA GTCAAGTCTGGGAGGTTGCACCCTGTGAGCACGCCTGGGAA < 41bp 1 0.376554826427711 1 0.115651905536652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780021 chr18:33780013 synonymous SNV . 0 13 hm5C_associated_SNPs_12922 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780013 33780013 1 + C A rs77632154 33780022 + 33780002 33780042 41 TCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAG TCAAGTCTGGGAGGTTGCACCCTGTGAGCACGCCTGGGAAG < 41bp 1 0.386438698757602 1 0.403189480304718 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780022 chr18:33780013 synonymous SNV . 0 12 hm5C_associated_SNPs_12923 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780013 33780013 1 + C A rs77632154 33780023 + 33780003 33780043 41 CAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAGT CAAGTCTGGGAGGTTGCACCCTGTGAGCACGCCTGGGAAGT < 41bp 1 0.599428944017919 1 0.188956290483475 experiment 0.801142111964162 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780023 chr18:33780013 synonymous SNV . 0 11 hm5C_associated_SNPs_12924 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780020 33780020 1 + A G rs623558 33780019 + 33779999 33780039 41 AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGG AGGTCAAGTCTGGGCGGTTGCGCCCTGTGAGCACGCCTGGG < 41bp 1 0.716700922436703 1 0.215149939060211 experiment 0.566598155126594 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780019 chr18:33780020 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_12925 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780020 33780020 1 + A G rs623558 33780021 + 33780001 33780041 41 GTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAA GTCAAGTCTGGGCGGTTGCGCCCTGTGAGCACGCCTGGGAA < 41bp 1 0.382766035065133 1 0.0651061832904816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780021 chr18:33780020 nonsynonymous SNV 0.000 1 20 hm5C_associated_SNPs_12926 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780020 33780020 1 + A G rs623558 33780022 + 33780002 33780042 41 TCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAG TCAAGTCTGGGCGGTTGCGCCCTGTGAGCACGCCTGGGAAG < 41bp 1 0.355364653001983 1 0.140163421630859 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780022 chr18:33780020 nonsynonymous SNV 0.000 1 19 hm5C_associated_SNPs_12927 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780020 33780020 1 + A G rs623558 33780023 + 33780003 33780043 41 CAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAGT CAAGTCTGGGCGGTTGCGCCCTGTGAGCACGCCTGGGAAGT < 41bp 1 0.505352684037767 1 0.0533977150917053 experiment 0.989294631924466 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780023 chr18:33780020 nonsynonymous SNV 0.000 1 18 hm5C_associated_SNPs_12928 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 46386865 46386865 1 + T C rs555225138 46386852 + 46386832 46386872 41 CCCCGCTGGAATCCTGTGTTCCTCGCCACTGGCTTCCAGCG CCCCGCTGGAATCCTGTGTTCCTCGCCACTGGCCTCCAGCG < 41bp 1 0.103360839804412 1 0.0141596794128418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTIF ENSG00000134030 UTR3 Human protein_coding chr18:46386852 chr18:46386865 . . 0 34 hm5C_associated_SNPs_12940 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:46386863-46386889
64251 chr18 48581278 48581278 1 + A G rs145805120 48581284 + 48581264 48581304 41 GCATCGACAGAGACATACAGCACCCCAGCTCTGTTAGCCCC GCATCGACAGAGACGTACAGCACCCCAGCTCTGTTAGCCCC < 41bp 1 0.348553114620677 1 0.217484474182129 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48581284 chr18:48581278 synonymous SNV . 0 15 hm5C_associated_SNPs_12951 2 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:48581246-48581296
64251 chr18 55711618 55711618 1 + T A rs4496245 55711627 + 55711607 55711647 41 GCCGCGCGCAGTGAGAGGCGCCGGGGCTGCCGCCCGGTGCT GCCGCGCGCAGAGAGAGGCGCCGGGGCTGCCGCCCGGTGCT < 41bp 1 0.72830784542217 1 0.781887769699097 experiment 0.54338430915566 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control NEDD4L ENSG00000049759 UTR5 Human protein_coding chr18:55711627 chr18:55711618 . . 0 12 hm5C_associated_SNPs_12954 0 0 16 CDC40 POSTAR2 ENCODE chr18:55711615-55711680
64251 chr18 55711703 55711703 1 + C A rs546323197 55711712 + 55711692 55711732 41 CCGGGAGGAAGCGGTGCCGGCAGCGTCCAGGGCGCGCTCTC CCGGGAGGAAGAGGTGCCGGCAGCGTCCAGGGCGCGCTCTC < 41bp 1 0.776238788732577 1 0.735672533512115 experiment 0.447522422534847 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 UTR5 Human protein_coding chr18:55711712 chr18:55711703 . . 0 12 hm5C_associated_SNPs_12955 0 0 9 DDX3X POSTAR2 ENCODE chr18:55711616-55711726
64251 chr18 55996244 55996244 1 + C G rs202231187 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTCCTCGGAGTGGGACAATAACATCAGACAGATCAA < 41bp 1 0.269664525881882 1 0.309290558099747 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996244 nonsynonymous SNV 0.743 4 17 hm5C_associated_SNPs_12956 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr18 57570333 57570333 1 + G A rs1041978 57570340 + 57570320 57570360 41 CCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGC CCTACTGTGAAGGAAGATGACCTGTGATTAGACTGGGCGGC < 41bp 1 0.539394122948037 1 0.119368046522141 experiment 0.921211754103926 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570340 chr18:57570333 . . 0 14 hm5C_associated_SNPs_12957 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:57569879-57570383
64251 chr18 57570333 57570333 1 + G A rs1041978 57570341 + 57570321 57570361 41 CTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCT CTACTGTGAAGGAAGATGACCTGTGATTAGACTGGGCGGCT < 41bp 1 0.674296797982144 1 0.266973257064819 experiment 0.651406404035711 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570341 chr18:57570333 . . 0 13 hm5C_associated_SNPs_12958 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:57569879-57570383
64251 chr18 57570342 57570342 1 + T C rs1942918 57570341 + 57570321 57570361 41 CTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCT CTACTGTGAAGGGAGATGACCCGTGATTAGACTGGGCGGCT < 41bp 1 0.535807625586397 1 0.299886763095856 experiment 0.928384748827205 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570341 chr18:57570342 . . 0 22 hm5C_associated_SNPs_12959 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:57569879-57570383
64251 chr18 57570342 57570342 1 + T C rs1942918 57570357 + 57570337 57570377 41 TGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTTCA TGACCCGTGATTAGACTGGGCGGCTGGGGAGAAACAGTTCA < 41bp 1 0.746152963241892 1 0.309932440519333 experiment 0.507694073516215 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570357 chr18:57570342 . . 0 6 hm5C_associated_SNPs_12960 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:57569879-57570383
64251 chr18 57570622 57570622 1 + G A rs7240310 57570621 + 57570601 57570641 41 TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAA TTCAATGTGTTCCTGTTGGGCATTACTAGAAACTATGGAAA < 41bp 1 0.349875897560346 1 0.0952201783657074 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PMAIP1 ENSG00000141682 UTR3 Human protein_coding chr18:57570621 chr18:57570622 . . 0 22 hm5C_associated_SNPs_12961 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:57570333-57570701
64251 chr18 60384459 60384459 1 + T A rs190856530 60384441 + 60384421 60384461 41 TTGGGGAGCTGTGGAGGGTGCAGGAGGAAGGCATGGACTCG TTGGGGAGCTGTGGAGGGTGCAGGAGGAAGGCATGGACACG < 41bp 1 0.766316454424899 1 0.717721700668335 experiment 0.467367091150202 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60384441 chr18:60384459 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_12964 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:60384450-60384467
64251 chr18 72167184 72167184 1 + C A rs191869036 72167174 + 72167154 72167194 41 GTTGCTCTTCCTTCCAAGAACCTTCGAGATCTGCGGTCTGG GTTGCTCTTCCTTCCAAGAACCTTCGAGATATGCGGTCTGG < 41bp 1 0.0947659958546884 1 0.0595845878124237 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNDP2 ENSG00000133313 UTR5 Human protein_coding chr18:72167174 chr18:72167184 . . 0 31 hm5C_associated_SNPs_12965 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr18:72167180-72167200
64251 chr18 74639277 74639277 1 + A G rs181512072 74639258 + 74639238 74639278 41 TCCAAGCATTCTGCAGCAGACGCTACAGCAGGGCAACCTAT TCCAAGCATTCTGCAGCAGACGCTACAGCAGGGCAACCTGT < 41bp 1 0.379413592538721 1 0.230005770921707 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74639258 chr18:74639277 synonymous SNV . 0 40 hm5C_associated_SNPs_12967 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr18:74639270-74639282
64251 chr18 77439899 77439899 1 + G C rs541456406 77439904 + 77439884 77439924 41 TAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGAC TAGGCGCTGCGCTCTCAGCGCAGCGCAGGCCCCGTACCGAC < 41bp 1 0.759062907906912 1 0.708768010139465 experiment 0.481874184186176 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTDP1 ENSG00000060069 UTR5 Human protein_coding chr18:77439904 chr18:77439899 . . 0 16 hm5C_associated_SNPs_12970 0 0 3 DDX3X POSTAR2 ENCODE chr18:77439866-77439995
64251 chr18 77439914 77439914 1 + C T rs182655138 77439904 + 77439884 77439924 41 TAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGAC TAGGCGCTGCGCTCTGAGCGCAGCGCAGGCTCCGTACCGAC < 41bp 1 0.750270591466362 1 0.714937508106232 experiment 0.499458817067276 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTDP1 ENSG00000060069 UTR5 Human protein_coding chr18:77439904 chr18:77439914 . . 0 31 hm5C_associated_SNPs_12971 0 0 3 DDX3X POSTAR2 ENCODE chr18:77439866-77439995
64251 chr18 77728107 77728107 1 + G A rs143104176 77728106 + 77728086 77728126 41 TACTGGAAGAAATGGGAAATCGCATTGAGGACTTACAGAAG TACTGGAAGAAATGGGAAATCACATTGAGGACTTACAGAAG < 41bp 1 0.5979742852844 1 0.399438917636871 experiment 0.8040514294312 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 CDS Human protein_coding chr18:77728106 chr18:77728107 nonsynonymous SNV 0.668 1 22 hm5C_associated_SNPs_12972 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:77728080-77728115
64251 chr18 77730663 77730663 1 + T G rs113959961 77730660 + 77730640 77730680 41 AGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGA AGAAATCACACGGACCAGCACCTGGATCTGGGACTTCCAGA < 41bp 1 0.522587060672585 1 0.0490711629390717 experiment 0.954825878654829 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 UTR3 Human protein_coding chr18:77730660 chr18:77730663 . . 0 24 hm5C_associated_SNPs_12973 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77730646-77730684
64251 chr18 77807137 77807137 1 + T G rs72972289 77807139 + 77807119 77807159 41 GCCCTGGCTCTCTGCCAGTGCAGCAGGGCTGTGAGAATCAA GCCCTGGCTCTCTGCCAGGGCAGCAGGGCTGTGAGAATCAA < 41bp 1 0.702328682021206 1 0.177119672298431 experiment 0.595342635957588 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBFA ENSG00000261126 ncRNA_exonic Human lincRNA chr18:77807139 chr18:77807137 . . 0 19 hm5C_associated_SNPs_12974 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:77807135-77807184
64251 chr18 77895408 77895408 1 + G A rs35954328 77895411 + 77895391 77895431 41 TGCAACGAGCTCTTTCCGTCCAACGTCTACCAGGTCCACAT TGCAACGAGCTCTTTCCATCCAACGTCTACCAGGTCCACAT < 41bp 1 0.574588658060137 1 0.49124014377594 experiment 0.850822683879726 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895411 chr18:77895408 synonymous SNV . 0 18 hm5C_associated_SNPs_12975 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:77895378-77895408
64251 chr19 507545 507545 1 + G A rs370127539 507528 + 507508 507548 41 TGGCGGCAGTGGAGAAGCGGCGGCAAGCGGTACCACCGCCG TGGCGGCAGTGGAGAAGCGGCGGCAAGCGGTACCACCACCG < 41bp 1 0.798815203200733 1 0.647610247135162 experiment 0.402369593598535 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPGS1 ENSG00000141933 CDS Human protein_coding chr19:507528 chr19:507545 synonymous SNV . 0 38 hm5C_associated_SNPs_12976 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:507540-507560
64251 chr19 541462 541462 1 + C T rs139926290 541454 + 541434 541474 41 CGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTAC CGCCCGACGAGGGCTCAGACCTCTTCTATGACGACTACTAC < 41bp 1 0.188089810991091 1 0.155771762132645 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC34 ENSG00000099804 CDS Human protein_coding chr19:541454 chr19:541462 synonymous SNV . 0 29 hm5C_associated_SNPs_12977 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:541451-541478
64251 chr19 579627 579627 1 + C T rs1803202 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG CGTGGTGCTGAAGGAGGATGCGCTGCCCGGCCAGAAAACGG < 41bp 1 0.449953145804199 1 0.178239107131958 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579627 synonymous SNV . 0 19 hm5C_associated_SNPs_12996 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579627 579627 1 + C T rs1803202 579636 + 579616 579656 41 CTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAA CTGAAGGAGGATGCGCTGCCCGGCCAGAAAACGGAGTTCAA < 41bp 1 0.475297960058588 1 0.644946932792664 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579636 chr19:579627 synonymous SNV . 0 12 hm5C_associated_SNPs_12997 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579630 579630 1 + G A rs61729580 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG CGTGGTGCTGAAGGAGGACGCACTGCCCGGCCAGAAAACGG < 41bp 1 0.406631315236524 1 0.228168070316315 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579630 synonymous SNV . 0 22 hm5C_associated_SNPs_12998 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579630 579630 1 + G A rs61729580 579636 + 579616 579656 41 CTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAA CTGAAGGAGGACGCACTGCCCGGCCAGAAAACGGAGTTCAA < 41bp 1 0.53212018261548 1 0.744309365749359 experiment 0.93575963476904 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579636 chr19:579630 synonymous SNV . 0 15 hm5C_associated_SNPs_12999 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579630 579630 1 + G A rs61729580 579640 + 579620 579660 41 AGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAAGTGA AGGAGGACGCACTGCCCGGCCAGAAAACGGAGTTCAAGTGA < 41bp 1 0.769564876538532 1 0.482612878084183 experiment 0.460870246922935 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579640 chr19:579630 synonymous SNV . 0 11 hm5C_associated_SNPs_13000 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 580388 580388 1 + C A rs2229664 580385 + 580365 580405 41 TGCTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAGA TGCTGTGGTTGCAGGGTGGACTCAGACGACCAGTGGGGAGA < 41bp 1 0.473607801111871 1 0.284375190734863 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580385 chr19:580388 synonymous SNV . 0 24 hm5C_associated_SNPs_13001 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 580388 580388 1 + C A rs2229664 580387 + 580367 580407 41 CTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAGAGT CTGTGGTTGCAGGGTGGACTCAGACGACCAGTGGGGAGAGT < 41bp 1 0.494862987823132 1 0.40036016702652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580387 chr19:580388 synonymous SNV . 0 22 hm5C_associated_SNPs_13002 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 580388 580388 1 + C A rs2229664 580394 + 580374 580414 41 TGCAGGGTGGACTCCGACGACCAGTGGGGAGAGTACTCCTG TGCAGGGTGGACTCAGACGACCAGTGGGGAGAGTACTCCTG < 41bp 1 0.444087628296082 1 0.143410235643387 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580394 chr19:580388 synonymous SNV . 0 15 hm5C_associated_SNPs_13003 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 580389 580389 1 + G C rs202113312 580385 + 580365 580405 41 TGCTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAGA TGCTGTGGTTGCAGGGTGGACTCCCACGACCAGTGGGGAGA < 41bp 1 0.278959497568888 1 0.117996662855148 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580385 chr19:580389 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_13004 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 580389 580389 1 + G C rs202113312 580387 + 580367 580407 41 CTGTGGTTGCAGGGTGGACTCCGACGACCAGTGGGGAGAGT CTGTGGTTGCAGGGTGGACTCCCACGACCAGTGGGGAGAGT < 41bp 1 0.194757640469809 1 0.0798741281032562 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580387 chr19:580389 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_13005 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 580389 580389 1 + G C rs202113312 580394 + 580374 580414 41 TGCAGGGTGGACTCCGACGACCAGTGGGGAGAGTACTCCTG TGCAGGGTGGACTCCCACGACCAGTGGGGAGAGTACTCCTG < 41bp 1 0.426173867692407 1 0.192533791065216 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580394 chr19:580389 nonsynonymous SNV 0.002 0 16 hm5C_associated_SNPs_13006 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:580377-580398
64251 chr19 582775 582775 1 + A C rs8637 582773 + 582753 582793 41 GCCCGAGGACGCTCCCTGCTCCACGTCTGCGCCGCCGCCGG GCCCGAGGACGCTCCCTGCTCCCCGTCTGCGCCGCCGCCGG < 41bp 1 0.736469412878018 1 0.0684731006622314 experiment 0.527061174243963 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BSG ENSG00000172270 UTR3 Human protein_coding chr19:582773 chr19:582775 . . 0 23 hm5C_associated_SNPs_13007 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:582740-582800
64251 chr19 582775 582775 1 + A C rs8637 582774 + 582754 582794 41 CCCGAGGACGCTCCCTGCTCCACGTCTGCGCCGCCGCCGGA CCCGAGGACGCTCCCTGCTCCCCGTCTGCGCCGCCGCCGGA < 41bp 1 0.481645059151555 1 0.0442714691162109 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BSG ENSG00000172270 UTR3 Human protein_coding chr19:582774 chr19:582775 . . 0 22 hm5C_associated_SNPs_13008 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:582740-582800
64251 chr19 582775 582775 1 + A C rs8637 582776 + 582756 582796 41 CGAGGACGCTCCCTGCTCCACGTCTGCGCCGCCGCCGGAGT CGAGGACGCTCCCTGCTCCCCGTCTGCGCCGCCGCCGGAGT < 41bp 1 0.368837897384142 1 0.173338949680328 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BSG ENSG00000172270 UTR3 Human protein_coding chr19:582776 chr19:582775 . . 0 20 hm5C_associated_SNPs_13009 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:582740-582800
64251 chr19 583314 583314 1 + C T rs114359237 583297 + 583277 583317 41 TCAAGTCACTCCCAAGCCCCCTCCTTGTCTGTGCATCCGGG TCAAGTCACTCCCAAGCCCCCTCCTTGTCTGTGCATCTGGG < 41bp 1 0.404327945684503 1 0.137012541294098 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BSG ENSG00000172270 UTR3 Human protein_coding chr19:583297 chr19:583314 . . 0 38 hm5C_associated_SNPs_13010 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:583309-583332
64251 chr19 681739 681739 1 + G A rs144896081 681756 + 681736 681776 41 CCCGAGGCCCCCCATCATCCCCTGTTATTTATTGCCACAGC CCCAAGGCCCCCCATCATCCCCTGTTATTTATTGCCACAGC < 41bp 1 0.138836875261104 1 0.04579958319664 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FSTL3 ENSG00000070404 UTR3 Human protein_coding chr19:681756 chr19:681739 . . 0 4 hm5C_associated_SNPs_13016 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:681723-681758
64251 chr19 681747 681747 1 + C A rs373498221 681756 + 681736 681776 41 CCCGAGGCCCCCCATCATCCCCTGTTATTTATTGCCACAGC CCCGAGGCCCCACATCATCCCCTGTTATTTATTGCCACAGC < 41bp 1 0.126420539278106 1 0.0314669609069824 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FSTL3 ENSG00000070404 UTR3 Human protein_coding chr19:681756 chr19:681747 . 0.000 0 12 hm5C_associated_SNPs_13017 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:681723-681758
64251 chr19 683086 683086 1 + C T rs374577132 683100 + 683080 683120 41 CCACGACGGCTCACCCTCCCCTCCATCTGCGTTGATGCTCA CCACGATGGCTCACCCTCCCCTCCATCTGCGTTGATGCTCA < 41bp 1 0.696412841953945 1 0.962996602058411 experiment 0.60717431609211 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FSTL3 ENSG00000070404 UTR3 Human protein_coding chr19:683100 chr19:683086 . . 0 7 hm5C_associated_SNPs_13018 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:683084-683107
64251 chr19 683103 683103 1 + C T rs80087121 683100 + 683080 683120 41 CCACGACGGCTCACCCTCCCCTCCATCTGCGTTGATGCTCA CCACGACGGCTCACCCTCCCCTCTATCTGCGTTGATGCTCA < 41bp 1 0.539283439975947 1 0.877861022949219 experiment 0.921433120048106 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FSTL3 ENSG00000070404 UTR3 Human protein_coding chr19:683100 chr19:683103 . . 0 24 hm5C_associated_SNPs_13019 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:683084-683107
64251 chr19 757037 757037 1 + T C rs35093527 757057 + 757037 757077 41 TACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGG CACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGG < 41bp 1 0.343592325722785 1 0.0730954110622406 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757057 chr19:757037 nonsynonymous SNV 0.022 2 1 hm5C_associated_SNPs_13020 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:757029-757061
64251 chr19 797433 797433 1 + C T rs575861492 797419 + 797399 797439 41 GTCTCCGCCATTTTGTGAGTCTATAACTCGGAGCCGTTGGG GTCTCCGCCATTTTGTGAGTCTATAACTCGGAGCTGTTGGG < 41bp 1 0.246143353108576 1 0.253291189670563 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:797419 chr19:797433 unknown . 0 35 hm5C_associated_SNPs_13032 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:797404-797439
64251 chr19 797433 797433 1 + C T rs575861492 797441 + 797421 797461 41 ATAACTCGGAGCCGTTGGGTCGGTTCCTGCTATTCCGGCGC ATAACTCGGAGCTGTTGGGTCGGTTCCTGCTATTCCGGCGC < 41bp 1 0.425371823818148 1 0.243668615818024 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:797441 chr19:797433 unknown . 0 13 hm5C_associated_SNPs_13033 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:797404-797439
64251 chr19 797439 797439 1 + G A rs199728719 797419 + 797399 797439 41 GTCTCCGCCATTTTGTGAGTCTATAACTCGGAGCCGTTGGG GTCTCCGCCATTTTGTGAGTCTATAACTCGGAGCCGTTGGA < 41bp 1 0.251057913651455 1 0.307790338993073 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:797419 chr19:797439 unknown . 0 41 hm5C_associated_SNPs_13034 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:797404-797439
64251 chr19 797439 797439 1 + G A rs199728719 797441 + 797421 797461 41 ATAACTCGGAGCCGTTGGGTCGGTTCCTGCTATTCCGGCGC ATAACTCGGAGCCGTTGGATCGGTTCCTGCTATTCCGGCGC < 41bp 1 0.496547540475355 1 0.395275056362152 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:797441 chr19:797439 unknown . 0 19 hm5C_associated_SNPs_13035 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:797404-797439
64251 chr19 804184 804184 1 + C T rs61757784 804178 + 804158 804198 41 CTGCCCTTTGGGAAGGTCACCAACCTCCTGATGCTGAAGGG CTGCCCTTTGGGAAGGTCACCAACCTTCTGATGCTGAAGGG < 41bp 1 0.312660434783541 1 0.148214608430862 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804178 chr19:804184 synonymous SNV . 0 27 hm5C_associated_SNPs_13036 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:804145-804187
64251 chr19 806430 806430 1 + C G rs199836672 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAACGTCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG < 41bp 1 0.309493253777542 1 0.0518009960651398 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806430 nonsynonymous SNV 0.040 0 10 hm5C_associated_SNPs_13037 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGTCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC < 41bp 1 0.416822649247117 1 0.107408165931702 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806430 nonsynonymous SNV 0.040 0 9 hm5C_associated_SNPs_13038 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG < 41bp 1 0.485481136715036 1 0.0404009819030762 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806430 nonsynonymous SNV 0.040 0 8 hm5C_associated_SNPs_13039 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG < 41bp 1 0.540910044378857 1 0.210612237453461 experiment 0.918179911242286 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806430 nonsynonymous SNV 0.040 0 7 hm5C_associated_SNPs_13040 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC < 41bp 1 0.552309668890344 1 0.412158727645874 experiment 0.895380662219311 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806430 nonsynonymous SNV 0.040 0 6 hm5C_associated_SNPs_13041 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCAGGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG < 41bp 1 0.78603032915095 1 0.430144220590591 experiment 0.427939341698101 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806430 nonsynonymous SNV 0.040 0 5 hm5C_associated_SNPs_13042 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806430 806430 1 + C G rs199836672 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG GGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG < 41bp 1 0.0789187667994129 1 0.122403532266617 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806430 nonsynonymous SNV 0.040 0 1 hm5C_associated_SNPs_13043 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806451 806451 1 + C T rs11549887 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAACGTCCACGGCGCCCTGGCCCCCCTGGCTATCCCCTCGG < 41bp 1 0.242405543547542 1 0.0482955276966095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806451 synonymous SNV . 0 31 hm5C_associated_SNPs_13044 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806451 806451 1 + C T rs11549887 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGTCCACGGCGCCCTGGCCCCCCTGGCTATCCCCTCGGC < 41bp 1 0.307606061436992 1 0.0644577145576477 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806451 synonymous SNV . 0 30 hm5C_associated_SNPs_13045 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806451 806451 1 + C T rs11549887 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCACGGCGCCCTGGCCCCCCTGGCTATCCCCTCGGCG < 41bp 1 0.419981915413716 1 0.0258196592330933 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806451 synonymous SNV . 0 29 hm5C_associated_SNPs_13046 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806451 806451 1 + C T rs11549887 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCACGGCGCCCTGGCCCCCCTGGCTATCCCCTCGGCGG < 41bp 1 0.496027304243967 1 0.311295688152313 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806451 synonymous SNV . 0 28 hm5C_associated_SNPs_13047 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806451 806451 1 + C T rs11549887 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCACGGCGCCCTGGCCCCCCTGGCTATCCCCTCGGCGGC < 41bp 1 0.588880291385656 1 0.28633064031601 experiment 0.822239417228687 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806451 synonymous SNV . 0 27 hm5C_associated_SNPs_13048 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806451 806451 1 + C T rs11549887 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCTATCCCCTCGGCGGCGGCGG < 41bp 1 0.168033298458028 1 0.0801767706871033 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806451 synonymous SNV . 0 22 hm5C_associated_SNPs_13049 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806466 806466 1 + G A rs200741107 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCA < 41bp 1 0.747370051823251 1 0.495555132627487 experiment 0.505259896353498 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806466 synonymous SNV . 0 41 hm5C_associated_SNPs_13050 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806466 806466 1 + G A rs200741107 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCAGCGG < 41bp 1 0.0583571909430843 1 0.0794002711772919 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806466 synonymous SNV . 0 37 hm5C_associated_SNPs_13051 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806466 806466 1 + G A rs200741107 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCAGCGGC < 41bp 1 0.172698334165695 1 0.0568119883537292 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806466 synonymous SNV . 0 36 hm5C_associated_SNPs_13052 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 808577 808577 1 + C T rs148751202 808586 + 808566 808606 41 CACAAGCTGCACGGGAAGCCCATCCGCATCACGCTCTCGAA CACAAGCTGCATGGGAAGCCCATCCGCATCACGCTCTCGAA < 41bp 1 0.216874609772555 1 0.157594710588455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808586 chr19:808577 synonymous SNV . 0 12 hm5C_associated_SNPs_13053 0 0 8 FXR2 POSTAR2 GSE39682,GSM977620 chr19:808559-808578
64251 chr19 811216 811216 1 + A C rs71335272 811204 + 811184 811224 41 CACACACCCACCCGGGGTGTCCTGGGGACCCAAGGGGTGGG CACACACCCACCCGGGGTGTCCTGGGGACCCACGGGGTGGG < 41bp 1 0.424455562480532 1 0.342008709907532 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:811204 chr19:811216 . . 0 33 hm5C_associated_SNPs_13054 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:811200-811220
64251 chr19 811216 811216 1 + A C rs71335272 811213 + 811193 811233 41 ACCCGGGGTGTCCTGGGGACCCAAGGGGTGGGGGGGTCACA ACCCGGGGTGTCCTGGGGACCCACGGGGTGGGGGGGTCACA < 41bp 1 0.530807072546448 1 0.212365478277206 experiment 0.938385854907104 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:811213 chr19:811216 . . 0 24 hm5C_associated_SNPs_13055 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:811200-811220
64251 chr19 811223 811223 1 + G A rs6698 811204 + 811184 811224 41 CACACACCCACCCGGGGTGTCCTGGGGACCCAAGGGGTGGG CACACACCCACCCGGGGTGTCCTGGGGACCCAAGGGGTGAG < 41bp 1 0.42003880807925 1 0.369272410869598 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:811204 chr19:811223 . . 0 40 hm5C_associated_SNPs_13056 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:811200-811240
64251 chr19 811223 811223 1 + G A rs6698 811213 + 811193 811233 41 ACCCGGGGTGTCCTGGGGACCCAAGGGGTGGGGGGGTCACA ACCCGGGGTGTCCTGGGGACCCAAGGGGTGAGGGGGTCACA < 41bp 1 0.528719381174241 1 0.574870347976685 experiment 0.942561237651518 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:811213 chr19:811223 . . 0 31 hm5C_associated_SNPs_13057 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:811200-811240
64251 chr19 812209 812209 1 + G A rs14613 812197 + 812177 812217 41 GGCTTGTGACGCGGAGAGAACCGATTAAAACCGTTTGAGAA GGCTTGTGACGCGGAGAGAACCGATTAAAACCATTTGAGAA < 41bp 1 0.439988812359862 1 0.0956390202045441 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:812197 chr19:812209 . . 0 33 hm5C_associated_SNPs_13058 0 0 36 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:812180-812220
64251 chr19 990238 990238 1 + C A rs117300378 990252 + 990232 990272 41 GGCCGACCCCTCCAGGATTCCGGCGCCCAGGCACGTCTGGT GGCCGAACCCTCCAGGATTCCGGCGCCCAGGCACGTCTGGT < 41bp 1 0.65216525837978 1 0.808264493942261 experiment 0.69566948324044 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR18 ENSG00000065268 CDS Human protein_coding chr19:990252 chr19:990238 nonsynonymous SNV 0.747 0 7 hm5C_associated_SNPs_13062 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:990238-990239
64251 chr19 1037809 1037809 1 + C G rs144570484 1037820 + 1037800 1037840 41 CACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCC CACAGTGGCGGATGGGGCTCCCTCGGGCACCGGCGACTGCC < 41bp 1 0.217553431837383 1 0.14561054110527 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037820 chr19:1037809 synonymous SNV . 0 10 hm5C_associated_SNPs_13064 0 0 6 UPF1 POSTAR2 GSE47976,GSM1163975 chr19:1037808-1037809
64251 chr19 1055299 1055299 1 + G A rs144595576 1055304 + 1055284 1055324 41 AGAACCTGACAGGCCGGAACCTGTCTGACTTCCTGGTCAAG AGAACCTGACAGGCCAGAACCTGTCTGACTTCCTGGTCAAG < 41bp 1 0.110362772248838 1 0.0831625163555145 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1055304 chr19:1055299 nonsynonymous SNV 0.280 4 16 hm5C_associated_SNPs_13075 0 0 3 DDX3X POSTAR2 ENCODE chr19:1055294-1055351
64251 chr19 1105668 1105668 1 + T A rs200291407 1105660 + 1105640 1105680 41 CACCTTGGCCGCCACAGGAGCCAGGGAGTAACGAAGAGATC CACCTTGGCCGCCACAGGAGCCAGGGAGAAACGAAGAGATC < 41bp 1 0.332581881262631 1 0.523594856262207 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GPX4 ENSG00000167468 CDS Human protein_coding chr19:1105660 chr19:1105668 nonsynonymous SNV 0.132 1 29 hm5C_associated_SNPs_13076 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1105654-1105787
64251 chr19 1105668 1105668 1 + T A rs200291407 1105661 + 1105641 1105681 41 ACCTTGGCCGCCACAGGAGCCAGGGAGTAACGAAGAGATCA ACCTTGGCCGCCACAGGAGCCAGGGAGAAACGAAGAGATCA < 41bp 1 0.7406978595985 1 0.855581998825073 experiment 0.518604280803 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GPX4 ENSG00000167468 CDS Human protein_coding chr19:1105661 chr19:1105668 nonsynonymous SNV 0.132 1 28 hm5C_associated_SNPs_13077 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1105654-1105787
64251 chr19 1241781 1241781 1 + C A rs564285599 1241779 + 1241759 1241799 41 TGCGCGTCGTCCTCCTCGCCCTCCAGGCCGCCCGCGCCGCG TGCGCGTCGTCCTCCTCGCCCTACAGGCCGCCCGCGCCGCG < 41bp 1 0.770815250889129 1 0.63416999578476 experiment 0.458369498221741 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5D ENSG00000099624 UTR5 Human protein_coding chr19:1241779 chr19:1241781 . . 0 23 hm5C_associated_SNPs_13078 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:1241780-1241820
64251 chr19 1241781 1241781 1 + C A rs564285599 1241782 + 1241762 1241802 41 GCGTCGTCCTCCTCGCCCTCCAGGCCGCCCGCGCCGCGCCG GCGTCGTCCTCCTCGCCCTACAGGCCGCCCGCGCCGCGCCG < 41bp 1 0.687150566972673 1 0.83154571056366 experiment 0.625698866054653 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5D ENSG00000099624 UTR5 Human protein_coding chr19:1241782 chr19:1241781 . . 0 20 hm5C_associated_SNPs_13079 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:1241780-1241820
64251 chr19 1241781 1241781 1 + C A rs564285599 1241786 + 1241766 1241806 41 CGTCCTCCTCGCCCTCCAGGCCGCCCGCGCCGCGCCGGAGT CGTCCTCCTCGCCCTACAGGCCGCCCGCGCCGCGCCGGAGT < 41bp 1 0.270522177436277 1 0.0973420143127441 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5D ENSG00000099624 UTR5 Human protein_coding chr19:1241786 chr19:1241781 . . 0 16 hm5C_associated_SNPs_13080 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:1241780-1241820
64251 chr19 1244764 1244764 1 + C T rs559902384 1244784 + 1244764 1244804 41 CGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGCCCCA TGGAGCCACCTCTGGATGAACTGCCCCCAGCCCCCGCCCCA < 41bp 1 0.641865276229728 1 0.0735363960266113 experiment 0.716269447540544 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP5D ENSG00000099624 UTR3 Human protein_coding chr19:1244784 chr19:1244764 . . 0 1 hm5C_associated_SNPs_13081 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1244737-1244806
64251 chr19 1254317 1254317 1 + G A rs562824172 1254325 + 1254305 1254345 41 CCGCTGCTGCGCGGGGGGACCCCAGCATAGCCTCCCCCGTG CCGCTGCTGCGCAGGGGGACCCCAGCATAGCCTCCCCCGTG < 41bp 1 0.513725737070674 1 0.273094415664673 experiment 0.972548525858651 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1254325 chr19:1254317 nonsynonymous SNV 0.002 1 13 hm5C_associated_SNPs_13082 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:1254310-1254334
64251 chr19 1254342 1254342 1 + C G rs575435876 1254325 + 1254305 1254345 41 CCGCTGCTGCGCGGGGGGACCCCAGCATAGCCTCCCCCGTG CCGCTGCTGCGCGGGGGGACCCCAGCATAGCCTCCCCGGTG < 41bp 1 0.580056204479297 1 0.432327836751938 experiment 0.839887591041407 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1254325 chr19:1254342 synonymous SNV . 0 38 hm5C_associated_SNPs_13083 0 0 2 FMR1 POSTAR2 ENCODE chr19:1254321-1254360
64251 chr19 1258940 1258940 1 + G T rs117875320 1258928 + 1258908 1258948 41 TTAAATAACGTCTGTGCCTCCACTGGTTGAGGGTGGAACCT TTAAATAACGTCTGTGCCTCCACTGGTTGAGGTTGGAACCT < 41bp 1 0.418164602425179 1 0.277173906564713 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIDN ENSG00000167470 UTR3 Human protein_coding chr19:1258928 chr19:1258940 . . 0 33 hm5C_associated_SNPs_13084 0 0 24 MOV10 POSTAR2 GSE37524,GSM921128 chr19:1258893-1258962
64251 chr19 1272187 1272187 1 + C G rs550382253 1272179 + 1272159 1272199 41 GTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT GTGCTTGCCCAGAAGAGGCGCATCTGTCGTCTCAGAGCCAT < 41bp 1 0.127539771658169 1 0.0740978717803955 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272179 chr19:1272187 synonymous SNV . 0 29 hm5C_associated_SNPs_13086 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1272184-1272214
64251 chr19 1272187 1272187 1 + C G rs550382253 1272182 + 1272162 1272202 41 CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC CTTGCCCAGAAGAGGCGCATCTGTCGTCTCAGAGCCATTTC < 41bp 1 0.472899905535704 1 0.0534769892692566 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272182 chr19:1272187 synonymous SNV . 0 26 hm5C_associated_SNPs_13087 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1272184-1272214
64251 chr19 1360996 1360996 1 + G A rs200272591 1361015 + 1360995 1361035 41 TGTCTTCCTTGCCCGGATTCCCAGAAGCTGGAGAAAGGTAA TATCTTCCTTGCCCGGATTCCCAGAAGCTGGAGAAAGGTAA < 41bp 1 0.346455606364413 1 0.480246156454086 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MUM1 ENSG00000160953 CDS Human protein_coding chr19:1361015 chr19:1360996 nonsynonymous SNV 0.002 0 2 hm5C_associated_SNPs_13090 0 0 3 BUD13 POSTAR2 ENCODE chr19:1360986-1361027
64251 chr19 1371140 1371140 1 + C T rs145734825 1371134 + 1371114 1371154 41 GGGCCTGCGCTGGGATTTTGCAACTCCGCACGAGGAGGCTG GGGCCTGCGCTGGGATTTTGCAACTCTGCACGAGGAGGCTG < 41bp 1 0.339630844093489 1 0.1300048828125 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MUM1 ENSG00000160953 UTR3 Human protein_coding chr19:1371134 chr19:1371140 . . 0 27 hm5C_associated_SNPs_13091 0 0 9 EFTUD2 POSTAR2 ENCODE chr19:1371092-1371176
64251 chr19 1383547 1383547 1 + C A rs111321874 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GACGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG < 41bp 1 0.569772257075157 1 0.34613311290741 experiment 0.860455485849686 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383547 . . 0 2 hm5C_associated_SNPs_13092 0 0 11 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383540-1383560
64251 chr19 1383550 1383550 1 + G A rs117758624 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGAAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG < 41bp 1 0.615747096497727 1 0.335829138755798 experiment 0.768505807004547 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383550 . . 0 5 hm5C_associated_SNPs_13093 0 0 11 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383540-1383560
64251 chr19 1383555 1383555 1 + C A rs183203340 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGAAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG < 41bp 1 0.591996311703871 1 0.417900025844574 experiment 0.816007376592257 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383555 . . 0 10 hm5C_associated_SNPs_13094 0 0 19 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383540-1383560
64251 chr19 1383559 1383559 1 + G A rs112353221 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGCAGTATCGTCTCTGTGGCGCAATCGGTTAGCG < 41bp 1 0.555235490941767 1 0.321859776973724 experiment 0.889529018116466 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383559 . . 0 14 hm5C_associated_SNPs_13095 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1383559-1383580
64251 chr19 1383561 1383561 1 + C A rs115444924 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGCAGTGTAGTCTCTGTGGCGCAATCGGTTAGCG < 41bp 1 0.642507225986442 1 0.29828816652298 experiment 0.714985548027115 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383561 . . 0 16 hm5C_associated_SNPs_13096 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1383559-1383580
64251 chr19 1383570 1383570 1 + G A rs576494027 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGCAGTGTCGTCTCTGTAGCGCAATCGGTTAGCG < 41bp 1 0.723564988419561 1 0.404458999633789 experiment 0.552870023160878 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383570 . . 0 25 hm5C_associated_SNPs_13097 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1383559-1383580
64251 chr19 1383578 1383578 1 + C A rs559354209 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATAGGTTAGCG < 41bp 1 0.601365488300578 1 0.573444306850433 experiment 0.797269023398845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383578 . . 0 33 hm5C_associated_SNPs_13098 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1383559-1383580
64251 chr19 1383578 1383578 1 + C A rs559354209 1383594 + 1383574 1383614 41 CAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTG CAATAGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTG < 41bp 1 0.15184927845914 1 0.109192043542862 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383594 chr19:1383578 . . 0 5 hm5C_associated_SNPs_13099 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1383559-1383580
64251 chr19 1383582 1383582 1 + T G rs138144610 1383566 + 1383546 1383586 41 GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTTAGCG GCCGGAGCGCAGTGTCGTCTCTGTGGCGCAATCGGTGAGCG < 41bp 1 0.675031521874082 1 0.40507185459137 experiment 0.649936956251837 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383566 chr19:1383582 . . 0 37 hm5C_associated_SNPs_13100 0 0 11 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383553-1383596
64251 chr19 1383582 1383582 1 + T G rs138144610 1383594 + 1383574 1383614 41 CAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTG CAATCGGTGAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTG < 41bp 1 0.163623445843092 1 0.100306391716003 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383594 chr19:1383582 . . 0 9 hm5C_associated_SNPs_13101 0 0 11 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383553-1383596
64251 chr19 1383591 1383591 1 + C G rs561309612 1383594 + 1383574 1383614 41 CAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTG CAATCGGTTAGCGCGTTGGGCTGTTAACCGAAAGGTTGGTG < 41bp 1 0.138365620650031 1 0.086452454328537 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS7 ENSG00000115286 UTR5 Human protein_coding chr19:1383594 chr19:1383591 . . 0 18 hm5C_associated_SNPs_13102 0 0 10 SSB POSTAR2 GSE95683,GSM2521599 chr19:1383553-1383596
64251 chr19 1393469 1393469 1 + C T rs73515052 1393464 + 1393444 1393484 41 ATCCTATGGATGGGCCGACTCGGAGCGCTGCCTCTTAGTGG ATCCTATGGATGGGCCGACTCGGAGTGCTGCCTCTTAGTGG < 41bp 1 0.797588407170295 1 0.845048844814301 experiment 0.40482318565941 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFS7 ENSG00000248015 ncRNA_exonic Human antisense chr19:1393464 chr19:1393469 . . 0 26 hm5C_associated_SNPs_13103 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:1393460-1393480
64251 chr19 1395028 1395028 1 + C T rs115766881 1395034 + 1395014 1395054 41 GTCCAGGGCAGCCCCGGGCCCTGCTCCCCACTGCTAAGTGT GTCCAGGGCAGCCCTGGGCCCTGCTCCCCACTGCTAAGTGT < 41bp 1 0.34127001907829 1 0.0180143415927887 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFS7 ENSG00000248015 ncRNA_exonic Human antisense chr19:1395034 chr19:1395028 . . 0 15 hm5C_associated_SNPs_13104 0 0 9 DDX59 POSTAR2 ENCODE chr19:1394941-1395036
64251 chr19 1434842 1434842 1 + C T rs61735591 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGGCCCCCCTGCCGGCGGCAGCGG < 41bp 1 0.368643727578229 1 0.107945740222931 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434842 synonymous SNV . 0 27 hm5C_associated_SNPs_13105 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434842 1434842 1 + C T rs61735591 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGGCCCCCCTGCCGGCGGCAGCGGC < 41bp 1 0.450635154683032 1 0.195636570453644 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434842 synonymous SNV . 0 26 hm5C_associated_SNPs_13106 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434842 1434842 1 + C T rs61735591 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGGCCCCCCTGCCGGCGGCAGCGGCT < 41bp 1 0.598642811103734 1 0.340992152690887 experiment 0.802714377792533 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434842 synonymous SNV . 0 25 hm5C_associated_SNPs_13107 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434842 1434842 1 + C T rs61735591 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGGCCCCCCTGCCGGCGGCAGCGGCTT < 41bp 1 0.551380431264523 1 0.142873734235764 experiment 0.897239137470953 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434842 synonymous SNV . 0 24 hm5C_associated_SNPs_13108 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1438865 1438865 1 + C T rs7251165 1438868 + 1438848 1438888 41 ACCTACCGCGGCGTGGACCTCGACCAGCTGCTGGACATGTC ACCTACCGCGGCGTGGATCTCGACCAGCTGCTGGACATGTC < 41bp 1 0.676560102879026 1 0.245660245418549 experiment 0.646879794241948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1438868 chr19:1438865 synonymous SNV . 0 18 hm5C_associated_SNPs_13109 0 0 47 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:1438820-1438880
64251 chr19 1440374 1440374 1 + C T rs139332437 1440359 + 1440339 1440379 41 CTCCCGCAGCCCGAGATGATCGGCCACTACCTGGGCGAGTT CTCCCGCAGCCCGAGATGATCGGCCACTACCTGGGTGAGTT < 41bp 1 0.595227073098064 1 0.707190155982971 experiment 0.809545853803871 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440359 chr19:1440374 synonymous SNV . 0 36 hm5C_associated_SNPs_13110 0 0 8 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:1440360-1440380
64251 chr19 1912877 1912877 1 + C T rs142175228 1912858 + 1912838 1912878 41 CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCG CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGTG < 41bp 1 0.129347647123089 1 0.231422543525696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912858 chr19:1912877 synonymous SNV . 0 40 hm5C_associated_SNPs_13116 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:1912834-1912878
64251 chr19 1925459 1925459 1 + G A rs200424152 1925452 + 1925432 1925472 41 CTGTGCCTTATGGAGGGGTCCGGCAGCGGCCACAATTGTCT CTGTGCCTTATGGAGGGGTCCGGCAGCAGCCACAATTGTCT < 41bp 1 0.759778615687616 1 0.432603359222412 experiment 0.480442768624768 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCAMP4 ENSG00000198683 ncRNA_exonic Human other chr19:1925452 chr19:1925459 . . 0 28 hm5C_associated_SNPs_13117 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1925407-1925464
64251 chr19 2226655 2226655 1 + C A rs113164803 2226642 + 2226622 2226662 41 CTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAAGGG CTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGATGAAGGG < 41bp 1 0.192032549539395 1 0.247294008731842 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOT1L ENSG00000104885 CDS Human protein_coding chr19:2226642 chr19:2226655 nonsynonymous SNV 0.045 0 34 hm5C_associated_SNPs_13120 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:2226626-2226657
64251 chr19 2271386 2271386 1 + C T rs28384673 2271393 + 2271373 2271413 41 ATCATCTTCAGTTCCAGGGTCTCCCTCCACTGCTGTAGTAA ATCATCTTCAGTTTCAGGGTCTCCCTCCACTGCTGTAGTAA < 41bp 1 0.234418483098529 1 0.258628219366074 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271393 chr19:2271386 nonsynonymous SNV 0.597 1 14 hm5C_associated_SNPs_13123 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:2271369-2271389
64251 chr19 2271906 2271906 1 + C A rs532142058 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTATACATCGAGATCCCGGGCGGCGCGCTGCCCGAG < 41bp 1 0.725344779873058 1 0.817157626152039 experiment 0.549310440253884 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271906 synonymous SNV . 0 8 hm5C_associated_SNPs_13124 0 0 31 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:2271780-2271920
64251 chr19 2271924 2271924 1 + C A rs200774437 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTCTACATCGAGATCCCGGGAGGCGCGCTGCCCGAG < 41bp 1 0.730648963472919 1 0.858916997909546 experiment 0.538702073054162 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271924 synonymous SNV . 0 26 hm5C_associated_SNPs_13125 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:2271823-2271942
64251 chr19 2271937 2271937 1 + G A rs533784107 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCAAG < 41bp 1 0.678680097539645 1 0.861434459686279 experiment 0.642639804920709 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271937 nonsynonymous SNV 0.726 1 39 hm5C_associated_SNPs_13126 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:2271823-2271942
64251 chr19 2328712 2328712 1 + G T rs538146670 2328700 + 2328680 2328720 41 GCCGTTGGTTGCGGCGGGCACCGGCCGACATGGCGGCAGCG GCCGTTGGTTGCGGCGGGCACCGGCCGACATGTCGGCAGCG < 41bp 1 0.52675122319858 1 0.658042669296265 experiment 0.94649755360284 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2328700 chr19:2328712 . 0.504 1 33 hm5C_associated_SNPs_13127 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:2328711-2328712
64251 chr19 2328719 2328719 1 + C A rs556086917 2328700 + 2328680 2328720 41 GCCGTTGGTTGCGGCGGGCACCGGCCGACATGGCGGCAGCG GCCGTTGGTTGCGGCGGGCACCGGCCGACATGGCGGCAGAG < 41bp 1 0.522624437220898 1 0.608023822307587 experiment 0.954751125558204 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2328700 chr19:2328719 . 0.013 0 40 hm5C_associated_SNPs_13128 0 0 5 DDX3X POSTAR2 ENCODE chr19:2328685-2328741
64251 chr19 2341138 2341138 1 + G T rs77578073 2341147 + 2341127 2341167 41 CAGCACCGCGTGATGAAGAGCCCTGGCCCCGGGCTGCTCTG CAGCACCGCGTTATGAAGAGCCCTGGCCCCGGGCTGCTCTG < 41bp 1 0.110830838265522 1 0.146822065114975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2341147 chr19:2341138 . . 0 12 hm5C_associated_SNPs_13129 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:2341120-2341140
64251 chr19 2341138 2341138 1 + G T rs77578073 2341154 + 2341134 2341174 41 GCGTGATGAAGAGCCCTGGCCCCGGGCTGCTCTGACAGGGC GCGTTATGAAGAGCCCTGGCCCCGGGCTGCTCTGACAGGGC < 41bp 1 0.256968067167848 1 0.45063790678978 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2341154 chr19:2341138 . . 0 5 hm5C_associated_SNPs_13130 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:2341120-2341140
64251 chr19 2341138 2341138 1 + G T rs77578073 2341155 + 2341135 2341175 41 CGTGATGAAGAGCCCTGGCCCCGGGCTGCTCTGACAGGGCT CGTTATGAAGAGCCCTGGCCCCGGGCTGCTCTGACAGGGCT < 41bp 1 0.414008647288848 1 0.572585582733154 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2341155 chr19:2341138 . . 0 4 hm5C_associated_SNPs_13131 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:2341120-2341140
64251 chr19 2343243 2343243 1 + G A rs145227878 2343242 + 2343222 2343262 41 CTCCAGGATGCCCTGGGCATCGCCTTCTGCCTCTACATGCT CTCCAGGATGCCCTGGGCATCACCTTCTGCCTCTACATGCT < 41bp 1 0.31426226415951 1 0.0544218719005585 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2343242 chr19:2343243 . 0.982 1 22 hm5C_associated_SNPs_13132 0 0 8 BUD13 POSTAR2 ENCODE chr19:2343159-2343247
64251 chr19 2476314 2476314 1 + G A rs531896163 2476310 + 2476290 2476330 41 TCGGATTTTGCAATTTCTCCCTGGGGACTGCCGTGGAGCCG TCGGATTTTGCAATTTCTCCCTGGAGACTGCCGTGGAGCCG < 41bp 1 0.691984859886735 1 0.802474498748779 experiment 0.616030280226529 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GADD45B ENSG00000099860 UTR5 Human protein_coding chr19:2476310 chr19:2476314 . . 0 25 hm5C_associated_SNPs_13135 0 0 5 EIF4G2 POSTAR2 ENCODE chr19:2476279-2476355
64251 chr19 2794802 2794802 1 + C A rs36054718 2794811 + 2794791 2794831 41 CATGTTTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGA CATGTTTCCCCATCCAAGGACATCCGGACAGCCAGCACAGA < 41bp 1 0.0499245239868718 1 0.278768509626389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THOP1 ENSG00000172009 CDS Human protein_coding chr19:2794811 chr19:2794802 synonymous SNV . 0 12 hm5C_associated_SNPs_13136 0 0 12 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:2794779-2794821
64251 chr19 2810273 2810273 1 + C T rs112329923 2810285 + 2810265 2810305 41 GACCTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGG GACCTGGGTACTCTGAGGCTCTGCCCCATCCCTGCAGGCGG < 41bp 1 0.219332841860836 1 0.500227630138397 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control THOP1 ENSG00000172009 UTR5 Human protein_coding chr19:2810285 chr19:2810273 . . 0 9 hm5C_associated_SNPs_13137 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:2810262-2810300
64251 chr19 2810273 2810273 1 + C T rs112329923 2810288 + 2810268 2810308 41 CTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGGAGT CTGGGTACTCTGAGGCTCTGCCCCATCCCTGCAGGCGGAGT < 41bp 1 0.219663641126768 1 0.221096307039261 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THOP1 ENSG00000172009 UTR5 Human protein_coding chr19:2810288 chr19:2810273 . . 0 6 hm5C_associated_SNPs_13138 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:2810262-2810300
64251 chr19 3119239 3119239 1 + C T rs4900 3119221 + 3119201 3119241 41 CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCAT CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACTAT < 41bp 1 0.276784069337189 1 0.404965162277222 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119221 chr19:3119239 synonymous SNV . 0 39 hm5C_associated_SNPs_13139 1 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:3119208-3119246
64251 chr19 3121969 3121969 1 + G A rs369007259 3121953 + 3121933 3121973 41 TGCAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACGGGGG TGCAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACAGGGG < 41bp 1 0.658104578453842 1 0.494461119174957 experiment 0.683790843092317 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNA11 ENSG00000267688 ncRNA_exonic Human antisense chr19:3121953 chr19:3121969 . . 0 37 hm5C_associated_SNPs_13140 0 0 2 FAM120A POSTAR2 ENCODE chr19:3121885-3121991
64251 chr19 3121969 3121969 1 + G A rs369007259 3121954 + 3121934 3121974 41 GCAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACGGGGGC GCAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACAGGGGC < 41bp 1 0.733397463033044 1 0.596060395240784 experiment 0.533205073933913 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNA11 ENSG00000267688 ncRNA_exonic Human antisense chr19:3121954 chr19:3121969 . . 0 36 hm5C_associated_SNPs_13141 0 0 2 FAM120A POSTAR2 ENCODE chr19:3121885-3121991
64251 chr19 3121969 3121969 1 + G A rs369007259 3121955 + 3121935 3121975 41 CAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACGGGGGCT CAGAGGCTGGGAAGGGTCCCCGGGCTGGAGCCACAGGGGCT < 41bp 1 0.677471465024299 1 0.665727853775024 experiment 0.645057069951401 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GNA11 ENSG00000267688 ncRNA_exonic Human antisense chr19:3121955 chr19:3121969 . . 0 35 hm5C_associated_SNPs_13142 0 0 2 FAM120A POSTAR2 ENCODE chr19:3121885-3121991
64251 chr19 3123574 3123574 1 + G A rs182892319 3123573 + 3123553 3123593 41 TGAGTGCCGACCACCTTCTCCGACCATGTTACGCCCGGGCG TGAGTGCCGACCACCTTCTCCAACCATGTTACGCCCGGGCG < 41bp 1 0.211862488501465 1 0.316134989261627 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNA11 ENSG00000088256 UTR3 Human protein_coding chr19:3123573 chr19:3123574 . . 0 22 hm5C_associated_SNPs_13143 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3123544-3123577
64251 chr19 3207646 3207646 1 + A G rs2288949 3207638 + 3207618 3207658 41 TGTCCCCAGCACTTCAGCCTCCTCTACAAGACCGTCCAGAG TGTCCCCAGCACTTCAGCCTCCTCTACAGGACCGTCCAGAG < 41bp 1 0.0736350225729137 1 0.224492192268372 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3207638 chr19:3207646 nonsynonymous SNV 0.647 0 29 hm5C_associated_SNPs_13145 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:3207635-3207649
64251 chr19 3462849 3462849 1 + C T rs8047 3462832 + 3462812 3462852 41 CCAGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGT CCAGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTTGGT < 41bp 1 0.0602142435467889 1 0.194137901067734 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3462832 chr19:3462849 . . 0 38 hm5C_associated_SNPs_13146 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3462830-3462855
64251 chr19 3462849 3462849 1 + C T rs8047 3462833 + 3462813 3462853 41 CAGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGTG CAGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTTGGTG < 41bp 1 0.0971790061975719 1 0.17969611287117 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3462833 chr19:3462849 . . 0 37 hm5C_associated_SNPs_13147 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3462830-3462855
64251 chr19 3462849 3462849 1 + C T rs8047 3462834 + 3462814 3462854 41 AGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGTGG AGGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTTGGTGG < 41bp 1 0.437761646906461 1 0.589706718921661 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3462834 chr19:3462849 . . 0 36 hm5C_associated_SNPs_13148 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3462830-3462855
64251 chr19 3462849 3462849 1 + C T rs8047 3462835 + 3462815 3462855 41 GGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGA GGGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTTGGTGGA < 41bp 1 0.145479752570451 1 0.688119232654572 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3462835 chr19:3462849 . . 0 35 hm5C_associated_SNPs_13149 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3462830-3462855
64251 chr19 3462849 3462849 1 + C T rs8047 3462836 + 3462816 3462856 41 GGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTCGGTGGAA GGGGCAGCACAGCCGGCCCCCGGCCCACGTTTTTGGTGGAA < 41bp 1 0.168845975941834 1 0.765260577201843 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3462836 chr19:3462849 . . 0 34 hm5C_associated_SNPs_13150 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3462830-3462855
64251 chr19 3466692 3466692 1 + T A rs73919194 3466691 + 3466671 3466711 41 TGCCCCACTCCTGAGCAAATCTGTCTTGCCAAGGAACTAGG TGCCCCACTCCTGAGCAAATCAGTCTTGCCAAGGAACTAGG < 41bp 1 0.207558790299259 1 0.127743184566498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3466691 chr19:3466692 . . 0 22 hm5C_associated_SNPs_13151 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3466686-3466710
64251 chr19 3468962 3468962 1 + C T rs146638802 3468945 + 3468925 3468965 41 CCTGGGCAGACCCGCCGGCTCTCCCCCCACCCCACCCCGCC CCTGGGCAGACCCGCCGGCTCTCCCCCCACCCCACCCTGCC < 41bp 1 0.378401166277022 1 0.124447464942932 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3468945 chr19:3468962 . . 0 38 hm5C_associated_SNPs_13152 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:3468960-3468980
64251 chr19 3762705 3762705 1 + A G rs148456964 3762687 + 3762667 3762707 41 AACGTGCACTTGCAAGCTGCCCGCAATACGTCATGGCGACC AACGTGCACTTGCAAGCTGCCCGCAATACGTCATGGCGGCC < 41bp 1 0.39770740848877 1 0.117643862962723 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762687 chr19:3762705 nonsynonymous SNV 0.212 0 39 hm5C_associated_SNPs_13157 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr19 3762705 3762705 1 + A G rs148456964 3762698 + 3762678 3762718 41 GCAAGCTGCCCGCAATACGTCATGGCGACCAAACGCCTTTT GCAAGCTGCCCGCAATACGTCATGGCGGCCAAACGCCTTTT < 41bp 1 0.628028119897057 1 0.0831609070301056 experiment 0.743943760205887 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762698 chr19:3762705 nonsynonymous SNV 0.212 0 28 hm5C_associated_SNPs_13158 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr19 3762708 3762708 1 + A C rs200937941 3762698 + 3762678 3762718 41 GCAAGCTGCCCGCAATACGTCATGGCGACCAAACGCCTTTT GCAAGCTGCCCGCAATACGTCATGGCGACCCAACGCCTTTT < 41bp 1 0.613583808124428 1 0.11714580655098 experiment 0.772832383751143 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762698 chr19:3762708 nonsynonymous SNV 0.026 0 31 hm5C_associated_SNPs_13159 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr19 4268633 4268633 1 + G A rs558674043 4268640 + 4268620 4268660 41 TGACGCCTGGCGCGTCCTCCCTGAGCCAACTGGGTGCATAC TGACGCCTGGCGCATCCTCCCTGAGCCAACTGGGTGCATAC < 41bp 1 0.708529173535555 1 0.120698362588882 experiment 0.582941652928891 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4268640 chr19:4268633 synonymous SNV . 0 14 hm5C_associated_SNPs_13162 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:4268629-4268661
64251 chr19 4402720 4402720 1 + C G rs532080132 4402714 + 4402694 4402734 41 CAGCGGCCGCCTGAGGGGAGCCCGCGCCTCCGCCGCCTGAG CAGCGGCCGCCTGAGGGGAGCCCGCGGCTCCGCCGCCTGAG < 41bp 1 0.439329106858918 1 0.316487520933151 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1A ENSG00000167670 UTR5 Human protein_coding chr19:4402714 chr19:4402720 . . 0 27 hm5C_associated_SNPs_13163 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:4402700-4402720
64251 chr19 4402720 4402720 1 + C G rs532080132 4402715 + 4402695 4402735 41 AGCGGCCGCCTGAGGGGAGCCCGCGCCTCCGCCGCCTGAGA AGCGGCCGCCTGAGGGGAGCCCGCGGCTCCGCCGCCTGAGA < 41bp 1 0.594641548433105 1 0.818751335144043 experiment 0.81071690313379 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1A ENSG00000167670 UTR5 Human protein_coding chr19:4402715 chr19:4402720 . . 0 26 hm5C_associated_SNPs_13164 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:4402700-4402720
64251 chr19 4402720 4402720 1 + C G rs532080132 4402718 + 4402698 4402738 41 GGCCGCCTGAGGGGAGCCCGCGCCTCCGCCGCCTGAGAGGA GGCCGCCTGAGGGGAGCCCGCGGCTCCGCCGCCTGAGAGGA < 41bp 1 0.687524481727427 1 0.645641922950745 experiment 0.624951036545147 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1A ENSG00000167670 UTR5 Human protein_coding chr19:4402718 chr19:4402720 . . 0 23 hm5C_associated_SNPs_13165 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:4402700-4402720
64251 chr19 4402720 4402720 1 + C G rs532080132 4402721 + 4402701 4402741 41 CGCCTGAGGGGAGCCCGCGCCTCCGCCGCCTGAGAGGAGGT CGCCTGAGGGGAGCCCGCGGCTCCGCCGCCTGAGAGGAGGT < 41bp 1 0.56459221179024 1 0.707516372203827 experiment 0.87081557641952 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1A ENSG00000167670 UTR5 Human protein_coding chr19:4402721 chr19:4402720 . . 0 20 hm5C_associated_SNPs_13166 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:4402700-4402720
64251 chr19 4409075 4409075 1 + C T rs202229686 4409086 + 4409066 4409106 41 ACTTGTCAACGGGAAGGGTCCCTTAGATAACTTTTTAAGAA ACTTGTCAATGGGAAGGGTCCCTTAGATAACTTTTTAAGAA < 41bp 1 0.0905905874263381 1 0.0973202586174011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409086 chr19:4409075 synonymous SNV . 0 10 hm5C_associated_SNPs_13167 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:4408996-4409086
64251 chr19 4409756 4409756 1 + A G rs2230636 4409753 + 4409733 4409773 41 CCCACCTCCACGCCCCTCCGCAGAGTGAGTATCTCCCATGG CCCACCTCCACGCCCCTCCGCAGGGTGAGTATCTCCCATGG < 41bp 1 0.761153754810091 1 0.824457705020905 experiment 0.477692490379818 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409753 chr19:4409756 synonymous SNV . 0 24 hm5C_associated_SNPs_13168 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:4409740-4409760
64251 chr19 4442244 4442244 1 + T C rs150686707 4442256 + 4442236 4442276 41 GTCCAGATTGGTGCTGAAGACATGGACGGCTTCCAGGCAGA GTCCAGATCGGTGCTGAAGACATGGACGGCTTCCAGGCAGA < 41bp 1 0.595342778934802 1 0.368693470954895 experiment 0.809314442130396 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442256 chr19:4442244 synonymous SNV . 0 9 hm5C_associated_SNPs_13169 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:4442222-4442268
64251 chr19 4442244 4442244 1 + T C rs150686707 4442262 + 4442242 4442282 41 ATTGGTGCTGAAGACATGGACGGCTTCCAGGCAGACACGGA ATCGGTGCTGAAGACATGGACGGCTTCCAGGCAGACACGGA < 41bp 1 0.384969990809604 1 0.14140722155571 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442262 chr19:4442244 synonymous SNV . 0 3 hm5C_associated_SNPs_13170 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:4442222-4442268
64251 chr19 4442280 4442280 1 + G A rs140147311 4442262 + 4442242 4442282 41 ATTGGTGCTGAAGACATGGACGGCTTCCAGGCAGACACGGA ATTGGTGCTGAAGACATGGACGGCTTCCAGGCAGACACAGA < 41bp 1 0.396915180967981 1 0.10079562664032 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442262 chr19:4442280 synonymous SNV . 0 39 hm5C_associated_SNPs_13171 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4442260-4442280
64251 chr19 4442280 4442280 1 + G A rs140147311 4442265 + 4442245 4442285 41 GGTGCTGAAGACATGGACGGCTTCCAGGCAGACACGGAGGA GGTGCTGAAGACATGGACGGCTTCCAGGCAGACACAGAGGA < 41bp 1 0.0621291307090623 1 0.162123322486877 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442265 chr19:4442280 synonymous SNV . 0 36 hm5C_associated_SNPs_13172 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4442260-4442280
64251 chr19 4442280 4442280 1 + G A rs140147311 4442277 + 4442257 4442297 41 ATGGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGA ATGGACGGCTTCCAGGCAGACACAGAGGAGGAGGAAGAGGA < 41bp 1 0.426780642019351 1 0.197217524051666 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442277 chr19:4442280 synonymous SNV . 0 24 hm5C_associated_SNPs_13173 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4442260-4442280
64251 chr19 4442280 4442280 1 + G A rs140147311 4442279 + 4442259 4442299 41 GGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGAGG GGACGGCTTCCAGGCAGACACAGAGGAGGAGGAAGAGGAGG < 41bp 1 0.694374411562716 1 0.598636388778687 experiment 0.611251176874567 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442279 chr19:4442280 synonymous SNV . 0 22 hm5C_associated_SNPs_13174 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4442260-4442280
64251 chr19 4475340 4475340 1 + A T rs193125218 4475343 + 4475323 4475363 41 ATCTTTTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTC ATCTTTTTCTTTGGCACTCACGAAACGTAAGTGTCCCCTTC < 41bp 1 0.547325574264225 1 0.426686823368073 experiment 0.90534885147155 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475343 chr19:4475340 synonymous SNV . 0 18 hm5C_associated_SNPs_13181 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:4475309-4475342
64251 chr19 4475340 4475340 1 + A T rs193125218 4475348 + 4475328 4475368 41 TTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTCTGGGG TTTCTTTGGCACTCACGAAACGTAAGTGTCCCCTTCTGGGG < 41bp 1 0.477004463500332 1 0.18256351351738 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475348 chr19:4475340 synonymous SNV . 0 13 hm5C_associated_SNPs_13182 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:4475309-4475342
64251 chr19 4499597 4499597 1 + A G rs180870155 4499598 + 4499578 4499618 41 GAGGCGGTGCAGAAAGTGAACAAGGCTGGGATGGAGAAGGA GAGGCGGTGCAGAAAGTGAGCAAGGCTGGGATGGAGAAGGA < 41bp 1 0.72767712127538 1 0.687524318695068 experiment 0.54464575744924 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4499598 chr19:4499597 nonsynonymous SNV 0.006 0 20 hm5C_associated_SNPs_13183 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4499570-4499598
64251 chr19 4499597 4499597 1 + A G rs180870155 4499603 + 4499583 4499623 41 GGTGCAGAAAGTGAACAAGGCTGGGATGGAGAAGGAGAAGG GGTGCAGAAAGTGAGCAAGGCTGGGATGGAGAAGGAGAAGG < 41bp 1 0.799790373634421 1 0.13478496670723 experiment 0.400419252731158 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4499603 chr19:4499597 nonsynonymous SNV 0.006 0 15 hm5C_associated_SNPs_13184 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4499570-4499598
64251 chr19 4724141 4724141 1 + C T rs553016069 4724121 + 4724101 4724141 41 TAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTC TAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTT < 41bp 1 0.405665689482355 1 0.717421233654022 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724121 chr19:4724141 . . 0 41 hm5C_associated_SNPs_13187 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724129 + 4724109 4724149 41 CTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAA CTGCCTTCCAAGCAGTTGACCCGGGTTCGATTTCCGGCCAA < 41bp 1 0.67464472147128 1 0.672698616981506 experiment 0.65071055705744 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724129 chr19:4724141 . . 0 33 hm5C_associated_SNPs_13188 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724130 + 4724110 4724150 41 TGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAAC TGCCTTCCAAGCAGTTGACCCGGGTTCGATTTCCGGCCAAC < 41bp 1 0.589514154977509 1 0.470156311988831 experiment 0.820971690044982 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724130 chr19:4724141 . . 0 32 hm5C_associated_SNPs_13189 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724136 + 4724116 4724156 41 CCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCATGC CCAAGCAGTTGACCCGGGTTCGATTTCCGGCCAACGCATGC < 41bp 1 0.25431249535481 1 0.086014062166214 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724136 chr19:4724141 . . 0 26 hm5C_associated_SNPs_13190 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724142 + 4724122 4724162 41 AGTTGACCCGGGTTCGATTCCCGGCCAACGCATGCGGTACC AGTTGACCCGGGTTCGATTTCCGGCCAACGCATGCGGTACC < 41bp 1 0.402798935682694 1 0.917587578296661 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724142 chr19:4724141 . . 0 20 hm5C_associated_SNPs_13191 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724143 + 4724123 4724163 41 GTTGACCCGGGTTCGATTCCCGGCCAACGCATGCGGTACCA GTTGACCCGGGTTCGATTTCCGGCCAACGCATGCGGTACCA < 41bp 1 0.55973920776553 1 0.47006568312645 experiment 0.88052158446894 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724143 chr19:4724141 . . 0 19 hm5C_associated_SNPs_13192 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724146 + 4724126 4724166 41 GACCCGGGTTCGATTCCCGGCCAACGCATGCGGTACCACTT GACCCGGGTTCGATTTCCGGCCAACGCATGCGGTACCACTT < 41bp 1 0.0431758492017965 1 0.134168446063995 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724146 chr19:4724141 . . 0 16 hm5C_associated_SNPs_13193 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724147 + 4724127 4724167 41 ACCCGGGTTCGATTCCCGGCCAACGCATGCGGTACCACTTT ACCCGGGTTCGATTTCCGGCCAACGCATGCGGTACCACTTT < 41bp 1 0.287229080377169 1 0.146640002727509 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724147 chr19:4724141 . . 0 15 hm5C_associated_SNPs_13194 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4724141 4724141 1 + C T rs553016069 4724150 + 4724130 4724170 41 CGGGTTCGATTCCCGGCCAACGCATGCGGTACCACTTTTGC CGGGTTCGATTTCCGGCCAACGCATGCGGTACCACTTTTGC < 41bp 1 0.186927191096831 1 0.225072026252747 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target DPP9 ENSG00000142002 intronic Human protein_coding chr19:4724150 chr19:4724141 . . 0 12 hm5C_associated_SNPs_13195 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:4724060-4724160
64251 chr19 4969134 4969134 1 + C A rs542159835 4969144 + 4969124 4969164 41 AGGGCTCGGTCGCCAGCAACCGAGCGGGGCCCGGCCCGAGC AGGGCTCGGTAGCCAGCAACCGAGCGGGGCCCGGCCCGAGC < 41bp 1 0.747946369882877 1 0.95832222700119 experiment 0.504107260234247 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4B ENSG00000127663 UTR5 Human protein_coding chr19:4969144 chr19:4969134 . . 0 11 hm5C_associated_SNPs_13205 0 0 2 AGGF1 POSTAR2 ENCODE chr19:4969131-4969239
64251 chr19 5135403 5135403 1 + G A rs558725727 5135388 + 5135368 5135408 41 GAGGCACCCATAGCCTCCCTCGGAAAGGGCTGCCCGGCCAC GAGGCACCCATAGCCTCCCTCGGAAAGGGCTGCCCAGCCAC < 41bp 1 0.650465308296163 1 0.955124139785767 experiment 0.699069383407673 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5135388 chr19:5135403 synonymous SNV . 0 36 hm5C_associated_SNPs_13206 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5135399-5135433
64251 chr19 5623138 5623138 1 + C A rs143563020 5623123 + 5623103 5623143 41 GCGCGCTGGGGCGACTGGAGCGGTTCCCTCGCAGGCGGCGC GCGCGCTGGGGCGACTGGAGCGGTTCCCTCGCAGGAGGCGC < 41bp 1 0.406245882616883 1 0.371853888034821 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SAFB ENSG00000160633 UTR5 Human protein_coding chr19:5623123 chr19:5623138 . . 0 36 hm5C_associated_SNPs_13207 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:5623120-5623140
64251 chr19 5690302 5690302 1 + C T rs532295847 5690310 + 5690290 5690330 41 TCCGCGCGGCGCCAGCCCTTCCGCCACGGCCGTCTCTGGAG TCCGCGCGGCGCTAGCCCTTCCGCCACGGCCGTCTCTGGAG < 41bp 1 0.276772809601521 1 0.533714652061462 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690310 chr19:5690302 . . 0 13 hm5C_associated_SNPs_13208 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:5690276-5690334
64251 chr19 5690304 5690304 1 + G A rs3810220 5690310 + 5690290 5690330 41 TCCGCGCGGCGCCAGCCCTTCCGCCACGGCCGTCTCTGGAG TCCGCGCGGCGCCAACCCTTCCGCCACGGCCGTCTCTGGAG < 41bp 1 0.286615175026743 1 0.441479861736298 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690310 chr19:5690304 . . 0 15 hm5C_associated_SNPs_13209 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:5690276-5690334
64251 chr19 5690314 5690314 1 + C G rs10419745 5690310 + 5690290 5690330 41 TCCGCGCGGCGCCAGCCCTTCCGCCACGGCCGTCTCTGGAG TCCGCGCGGCGCCAGCCCTTCCGCGACGGCCGTCTCTGGAG < 41bp 1 0.592508365149998 1 0.437264114618301 experiment 0.814983269700003 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690310 chr19:5690314 . . 0 25 hm5C_associated_SNPs_13210 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:5690276-5690334
64251 chr19 5690494 5690494 1 + C A rs1049958 5690507 + 5690487 5690527 41 TCCGCCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTA TCCGCCCATTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTA < 41bp 1 0.402908886197648 1 0.0339812934398651 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690507 chr19:5690494 . . 0 8 hm5C_associated_SNPs_13211 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5690494 5690494 1 + C A rs1049958 5690511 + 5690491 5690531 41 CCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTACGCT CCCATTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTACGCT < 41bp 1 0.627445726739877 1 0.456348180770874 experiment 0.745108546520245 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690511 chr19:5690494 . . 0 4 hm5C_associated_SNPs_13212 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5690501 5690501 1 + C G rs548116652 5690507 + 5690487 5690527 41 TCCGCCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTA TCCGCCCCTTCTCCGCGTCGCTGTCCGCAGCCATGGCCCTA < 41bp 1 0.383573448323837 1 0.039300799369812 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690507 chr19:5690501 . . 0 15 hm5C_associated_SNPs_13213 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5690501 5690501 1 + C G rs548116652 5690511 + 5690491 5690531 41 CCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTACGCT CCCCTTCTCCGCGTCGCTGTCCGCAGCCATGGCCCTACGCT < 41bp 1 0.629108156991639 1 0.437980532646179 experiment 0.741783686016721 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690511 chr19:5690501 . . 0 11 hm5C_associated_SNPs_13214 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5690509 5690509 1 + G C rs201910502 5690507 + 5690487 5690527 41 TCCGCCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTA TCCGCCCCTTCTCCCCGTCGCTCTCCGCAGCCATGGCCCTA < 41bp 1 0.312217615168173 1 0.022092193365097 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690507 chr19:5690509 . . 0 23 hm5C_associated_SNPs_13215 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5690509 5690509 1 + G C rs201910502 5690511 + 5690491 5690531 41 CCCCTTCTCCCCGTCGCTGTCCGCAGCCATGGCCCTACGCT CCCCTTCTCCCCGTCGCTCTCCGCAGCCATGGCCCTACGCT < 41bp 1 0.660911129114254 1 0.405080229043961 experiment 0.678177741771493 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL36 ENSG00000130255 UTR5 Human protein_coding chr19:5690511 chr19:5690509 . . 0 19 hm5C_associated_SNPs_13216 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5690408-5690585
64251 chr19 5691349 5691349 1 + A G rs201113121 5691353 + 5691333 5691373 41 CTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGA CTGACCAAACACACCAGGTTCGTGCGGGACATGATTCGGGA < 41bp 1 0.332340728933054 1 0.208826720714569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691353 chr19:5691349 nonsynonymous SNV 0.998 0 17 hm5C_associated_SNPs_13217 0 0 62 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5691320-5691360
64251 chr19 5691641 5691641 1 + C G rs201621814 5691640 + 5691620 5691660 41 CAAGAAAGACTGAGCCCCTCCCCTGCCCTCTCCCTGAAATA CAAGAAAGACTGAGCCCCTCCGCTGCCCTCTCCCTGAAATA < 41bp 1 0.329942344270164 1 0.357696801424026 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL36 ENSG00000130255 UTR3 Human protein_coding chr19:5691640 chr19:5691641 . . 0 22 hm5C_associated_SNPs_13218 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691541-5691700
64251 chr19 5691641 5691641 1 + C G rs201621814 5691642 + 5691622 5691662 41 AGAAAGACTGAGCCCCTCCCCTGCCCTCTCCCTGAAATAAA AGAAAGACTGAGCCCCTCCGCTGCCCTCTCCCTGAAATAAA < 41bp 1 0.44181736344783 1 0.30493700504303 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL36 ENSG00000130255 UTR3 Human protein_coding chr19:5691642 chr19:5691641 . . 0 20 hm5C_associated_SNPs_13219 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691541-5691700
64251 chr19 5915392 5915392 1 + T C rs10423464 5915391 + 5915371 5915411 41 TCCCCACCCCTGCCGGAGACCTCCCTTCCCTGGGCCCCTTC TCCCCACCCCTGCCGGAGACCCCCCTTCCCTGGGCCCCTTC < 41bp 1 0.23710073895704 1 0.284177511930466 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPS ENSG00000105519 UTR3 Human protein_coding chr19:5915391 chr19:5915392 . . 0 22 hm5C_associated_SNPs_13221 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5915386-5915434
64251 chr19 6742999 6742999 1 + C T rs148560112 6743009 + 6742989 6743029 41 AACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT AACAGTCCTTTGTACAGATTCTCCAGGAGGTGAATGACTTT < 41bp 1 0.75280090873801 1 0.820325314998627 experiment 0.494398182523981 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743009 chr19:6742999 synonymous SNV . 0 11 hm5C_associated_SNPs_13223 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:6742978-6743017
64251 chr19 7598726 7598726 1 + C A rs143176884 7598730 + 7598710 7598750 41 CCCTGGACTGCAGAGACCCCCGCCCCCGACCCCGCTTATTT CCCTGGACTGCAGAGAACCCCGCCCCCGACCCCGCTTATTT < 41bp 1 0.364824353846499 1 0.335457921028137 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7598730 chr19:7598726 unknown . 0 17 hm5C_associated_SNPs_13226 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:7598709-7598736
64251 chr19 7598726 7598726 1 + C A rs143176884 7598732 + 7598712 7598752 41 CTGGACTGCAGAGACCCCCGCCCCCGACCCCGCTTATTTAT CTGGACTGCAGAGAACCCCGCCCCCGACCCCGCTTATTTAT < 41bp 1 0.12950325633578 1 0.0971560776233673 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7598732 chr19:7598726 unknown . 0 15 hm5C_associated_SNPs_13227 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:7598709-7598736
64251 chr19 7626527 7626527 1 + C A rs144903832 7626507 + 7626487 7626527 41 GACTGGGCTGGGGGTGGCCCCGTGGGGGTAGCTCACTCCCC GACTGGGCTGGGGGTGGCCCCGTGGGGGTAGCTCACTCCCA < 41bp 1 0.789696014941068 1 0.920913219451904 experiment 0.420607970117864 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PNPLA6 ENSG00000032444 UTR3 Human protein_coding chr19:7626507 chr19:7626527 . . 0 41 hm5C_associated_SNPs_13236 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:7626517-7626541
64251 chr19 7676674 7676674 1 + C T rs200273174 7676663 + 7676643 7676683 41 GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCT GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTTGGACAGCCT < 41bp 1 0.331232397758394 1 0.186805933713913 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676663 chr19:7676674 nonsynonymous SNV 0.812 3 32 hm5C_associated_SNPs_13237 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr19 7696198 7696198 1 + G A rs113124654 7696203 + 7696183 7696223 41 AAGCGGATCCCACGCGGACCCCTTTGTAATTGGCAGGGGGC AAGCGGATCCCACGCAGACCCCTTTGTAATTGGCAGGGGGC < 41bp 1 0.0660924405970532 1 0.0641557276248932 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PET100 ENSG00000229833 UTR3 Human protein_coding chr19:7696203 chr19:7696198 . . 0 16 hm5C_associated_SNPs_13238 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7696149-7696238
64251 chr19 7712708 7712708 1 + G A rs28464386 7712710 + 7712690 7712730 41 GCCCTGACCCCTGGCCCCGCCCCCTACCCCTCCCTTTCCAG GCCCTGACCCCTGGCCCCACCCCCTACCCCTCCCTTTCCAG < 41bp 1 0.328296787328973 1 0.18964084982872 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STXBP2 ENSG00000076944 UTR3 Human protein_coding chr19:7712710 chr19:7712708 . . 0 19 hm5C_associated_SNPs_13239 3 0 3 DDX55 POSTAR2 ENCODE chr19:7712691-7712719
64251 chr19 7712708 7712708 1 + G A rs28464386 7712711 + 7712691 7712731 41 CCCTGACCCCTGGCCCCGCCCCCTACCCCTCCCTTTCCAGA CCCTGACCCCTGGCCCCACCCCCTACCCCTCCCTTTCCAGA < 41bp 1 0.339275082626802 1 0.122949033975601 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STXBP2 ENSG00000076944 UTR3 Human protein_coding chr19:7712711 chr19:7712708 . . 0 18 hm5C_associated_SNPs_13240 3 0 3 DDX55 POSTAR2 ENCODE chr19:7712691-7712719
64251 chr19 7745745 7745745 1 + G A rs116496345 7745733 + 7745713 7745753 41 CCTTTTACGGCGCCGTAAAGCAGCTCGGCCGAGCAGACTGC CCTTTTACGGCGCCGTAAAGCAGCTCGGCCGAACAGACTGC < 41bp 1 0.656108077081147 1 0.701391577720642 experiment 0.687783845837705 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TRAPPC5 ENSG00000181029 UTR5 Human protein_coding chr19:7745733 chr19:7745745 . . 0 33 hm5C_associated_SNPs_13241 0 0 3 DDX3X POSTAR2 ENCODE chr19:7745729-7745787
64251 chr19 7963948 7963948 1 + G A rs3745379 7963943 + 7963923 7963963 41 GAACCAGAAGGGCCCAGCAGCCACCGAACGGGCTGCGGCCA GAACCAGAAGGGCCCAGCAGCCACCAAACGGGCTGCGGCCA < 41bp 1 0.177171300501211 1 0.112240850925446 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963943 chr19:7963948 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_13242 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:7963940-7963960
64251 chr19 7963949 7963949 1 + A G rs2042919 7963943 + 7963923 7963963 41 GAACCAGAAGGGCCCAGCAGCCACCGAACGGGCTGCGGCCA GAACCAGAAGGGCCCAGCAGCCACCGGACGGGCTGCGGCCA < 41bp 1 0.216666103309926 1 0.187816560268402 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963943 chr19:7963949 nonsynonymous SNV 0.000 0 27 hm5C_associated_SNPs_13243 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:7963940-7963960
64251 chr19 7977794 7977794 1 + C T rs576342121 7977814 + 7977794 7977834 41 CCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCCCCTGGG TCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCCCCTGGG < 41bp 1 0.0675286207866211 1 0.280259490013123 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K7 ENSG00000268149 ncRNA_exonic Human antisense chr19:7977814 chr19:7977794 . . 0 1 hm5C_associated_SNPs_13244 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:7977750-7977796
64251 chr19 7977822 7977822 1 + C T rs535957384 7977814 + 7977794 7977834 41 CCTGAGCCTGGGCCCAGCCACCTCCTGACGGGTCCCCTGGG CCTGAGCCTGGGCCCAGCCACCTCCTGATGGGTCCCCTGGG < 41bp 1 0.0671179891706723 1 0.232921421527863 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K7 ENSG00000268149 ncRNA_intronic Human antisense chr19:7977814 chr19:7977822 . . 0 29 hm5C_associated_SNPs_13245 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:7977799-7977832
64251 chr19 7979010 7979010 1 + C A rs183484324 7979011 + 7978991 7979031 41 TGCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGGG TGCATGGCTGGTCCCAGGGACAGCACAGGCCCGAGGCCGGG < 41bp 1 0.65266872407131 1 0.431987822055817 experiment 0.694662551857379 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7979011 chr19:7979010 . . 0 20 hm5C_associated_SNPs_13246 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:7978976-7979013
64251 chr19 7979022 7979022 1 + C G rs561970618 7979010 + 7978990 7979030 41 TTGCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGG TTGCATGGCTGGTCCCAGGGCCAGCACAGGCCGGAGGCCGG < 41bp 1 0.261215923097426 1 0.549803495407104 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7979010 chr19:7979022 . . 0 33 hm5C_associated_SNPs_13247 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr19:7978977-7979024
64251 chr19 7979022 7979022 1 + C G rs561970618 7979011 + 7978991 7979031 41 TGCATGGCTGGTCCCAGGGCCAGCACAGGCCCGAGGCCGGG TGCATGGCTGGTCCCAGGGCCAGCACAGGCCGGAGGCCGGG < 41bp 1 0.65562939414646 1 0.447930127382278 experiment 0.68874121170708 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7979011 chr19:7979022 . . 0 32 hm5C_associated_SNPs_13248 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr19:7978977-7979024
64251 chr19 8478250 8478250 1 + G C rs890849 8478232 + 8478212 8478252 41 GAGCTAGTGGCGCCGACGGGCCGGGCCGGGCCGGGACCGGG GAGCTAGTGGCGCCGACGGGCCGGGCCGGGCCGGGACCCGG < 41bp 1 0.772318320967931 1 0.625485181808472 experiment 0.455363358064139 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478232 chr19:8478250 . . 0 39 hm5C_associated_SNPs_13251 0 0 2 DDX3X POSTAR2 ENCODE chr19:8478211-8478284
64251 chr19 8478291 8478291 1 + C T rs530839730 8478285 + 8478265 8478305 41 CGAGGGGCCTGTGCGGCCGCCCGGCCCGGCCGCGGATCAGG CGAGGGGCCTGTGCGGCCGCCCGGCCTGGCCGCGGATCAGG < 41bp 1 0.461141302288917 1 0.420229196548462 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478285 chr19:8478291 . . 0 27 hm5C_associated_SNPs_13252 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 8478291 8478291 1 + C T rs530839730 8478286 + 8478266 8478306 41 GAGGGGCCTGTGCGGCCGCCCGGCCCGGCCGCGGATCAGGT GAGGGGCCTGTGCGGCCGCCCGGCCTGGCCGCGGATCAGGT < 41bp 1 0.572029994939782 1 0.806360960006714 experiment 0.855940010120437 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478286 chr19:8478291 . . 0 26 hm5C_associated_SNPs_13253 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 8478291 8478291 1 + C T rs530839730 8478289 + 8478269 8478309 41 GGGCCTGTGCGGCCGCCCGGCCCGGCCGCGGATCAGGTAGG GGGCCTGTGCGGCCGCCCGGCCTGGCCGCGGATCAGGTAGG < 41bp 1 0.308109978577612 1 0.141516268253326 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478289 chr19:8478291 . . 0 23 hm5C_associated_SNPs_13254 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 8478291 8478291 1 + C T rs530839730 8478290 + 8478270 8478310 41 GGCCTGTGCGGCCGCCCGGCCCGGCCGCGGATCAGGTAGGC GGCCTGTGCGGCCGCCCGGCCTGGCCGCGGATCAGGTAGGC < 41bp 1 0.698068467629333 1 0.120095521211624 experiment 0.603863064741334 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478290 chr19:8478291 . . 0 22 hm5C_associated_SNPs_13255 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 8478291 8478291 1 + C T rs530839730 8478294 + 8478274 8478314 41 TGTGCGGCCGCCCGGCCCGGCCGCGGATCAGGTAGGCACGG TGTGCGGCCGCCCGGCCTGGCCGCGGATCAGGTAGGCACGG < 41bp 1 0.736692450122232 1 0.569111347198486 experiment 0.526615099755537 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARCH2 ENSG00000099785 UTR5 Human protein_coding chr19:8478294 chr19:8478291 . . 0 18 hm5C_associated_SNPs_13256 0 0 1 DDX3X POSTAR2 ENCODE chr19:8478263-8478308
64251 chr19 8551094 8551094 1 + T C rs2230647 8551091 + 8551071 8551111 41 AACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCT AACAGCCTCGAGCGCATGGGCCCCGCCATGGGCCCGGCCCT < 41bp 1 0.577948488957092 1 0.0476458966732025 experiment 0.844103022085816 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551091 chr19:8551094 synonymous SNV . 0 24 hm5C_associated_SNPs_13257 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551094 8551094 1 + T C rs2230647 8551092 + 8551072 8551112 41 ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTG ACAGCCTCGAGCGCATGGGCCCCGCCATGGGCCCGGCCCTG < 41bp 1 0.45207543512536 1 0.0819169282913208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551092 chr19:8551094 synonymous SNV . 0 23 hm5C_associated_SNPs_13258 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551094 8551094 1 + T C rs2230647 8551093 + 8551073 8551113 41 CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTGG CAGCCTCGAGCGCATGGGCCCCGCCATGGGCCCGGCCCTGG < 41bp 1 0.445786397079395 1 0.103292196989059 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551093 chr19:8551094 synonymous SNV . 0 22 hm5C_associated_SNPs_13259 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551094 8551094 1 + T C rs2230647 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCCGCCATGGGCCCGGCCCTGGGCGCTGGCAT < 41bp 1 0.663447740184524 1 0.19781169295311 experiment 0.673104519630953 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551094 synonymous SNV . 0 12 hm5C_associated_SNPs_13260 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551094 8551094 1 + T C rs2230647 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCCGCCATGGGCCCGGCCCTGGGCGCTGGCATT < 41bp 1 0.517917326112139 1 0.146790564060211 experiment 0.964165347775721 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551094 synonymous SNV . 0 11 hm5C_associated_SNPs_13261 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551094 8551094 1 + T C rs2230647 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCCGCCATGGGCCCGGCCCTGGGCGCTGGCATTG < 41bp 1 0.788510583399121 1 0.138556808233261 experiment 0.422978833201758 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551094 synonymous SNV . 0 10 hm5C_associated_SNPs_13262 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551112 8551112 1 + G A rs12977861 8551092 + 8551072 8551112 41 ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTG ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTA < 41bp 1 0.218172740809585 1 0.0487116873264313 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551092 chr19:8551112 synonymous SNV . 0 41 hm5C_associated_SNPs_13263 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551112 8551112 1 + G A rs12977861 8551093 + 8551073 8551113 41 CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTGG CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTAG < 41bp 1 0.703332215825294 1 0.0468412637710571 experiment 0.593335568349411 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551093 chr19:8551112 synonymous SNV . 0 40 hm5C_associated_SNPs_13264 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551112 8551112 1 + G A rs12977861 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCTGCCATGGGCCCGGCCCTAGGCGCTGGCAT < 41bp 1 0.619790100840968 1 0.108049750328064 experiment 0.760419798318064 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551112 synonymous SNV . 0 30 hm5C_associated_SNPs_13265 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551112 8551112 1 + G A rs12977861 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCTGCCATGGGCCCGGCCCTAGGCGCTGGCATT < 41bp 1 0.500360920168982 1 0.146851390600204 experiment 0.999278159662036 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551112 synonymous SNV . 0 29 hm5C_associated_SNPs_13266 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551112 8551112 1 + G A rs12977861 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCTGCCATGGGCCCGGCCCTAGGCGCTGGCATTG < 41bp 1 0.762362339446701 1 0.21113845705986 experiment 0.475275321106599 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551112 synonymous SNV . 0 28 hm5C_associated_SNPs_13267 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551115 8551115 1 + C T rs61742109 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGTGCTGGCAT < 41bp 1 0.620316382575069 1 0.13597646355629 experiment 0.759367234849861 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551115 synonymous SNV . 0 33 hm5C_associated_SNPs_13268 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551115 8551115 1 + C T rs61742109 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCTGCCATGGGCCCGGCCCTGGGTGCTGGCATT < 41bp 1 0.549171440100511 1 0.203924596309662 experiment 0.901657119798978 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551115 synonymous SNV . 0 32 hm5C_associated_SNPs_13269 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551115 8551115 1 + C T rs61742109 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCTGCCATGGGCCCGGCCCTGGGTGCTGGCATTG < 41bp 1 0.739865184202972 1 0.193794518709183 experiment 0.520269631594055 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551115 synonymous SNV . 0 31 hm5C_associated_SNPs_13270 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 9454006 9454006 1 + A T rs114556235 9454016 + 9453996 9454036 41 AAACCTGTCGATGCTTACATCTTACTGAGTCTGTTTGAACT AAACCTGTCGTTGCTTACATCTTACTGAGTCTGTTTGAACT < 41bp 1 0.0768275191531334 1 0.210382878780365 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF559 ENSG00000188321 UTR3 Human protein_coding chr19:9454016 chr19:9454006 . . 0 11 hm5C_associated_SNPs_13271 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:9453991-9454007
64251 chr19 9960114 9960114 1 + G A rs138973404 9960128 + 9960108 9960148 41 ACTTCAGCAGGGGTGGGAGGCTCCCAGACCCAGGGCAGTGT ACTTCAACAGGGGTGGGAGGCTCCCAGACCCAGGGCAGTGT < 41bp 1 0.196651056823377 1 0.337972044944763 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIN1 ENSG00000127445 UTR3 Human protein_coding chr19:9960128 chr19:9960114 . . 0 7 hm5C_associated_SNPs_13272 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:9959990-9960114
64251 chr19 10218332 10218332 1 + A C rs2305789 10218336 + 10218316 10218356 41 GACCCCCCCTTCCCCTATCTCTCATGATGAACACATATGCC GACCCCCCCTTCCCCTCTCTCTCATGATGAACACATATGCC < 41bp 1 0.161972619355139 1 0.181389838457108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD105 ENSG00000209645 ncRNA_exonic Human snoRNA chr19:10218336 chr19:10218332 . . 0 17 hm5C_associated_SNPs_13273 0 0 22 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:10218320-10218340
64251 chr19 10218391 10218391 1 + C T rs140010724 10218375 + 10218355 10218395 41 CCTCTGAGCTGCTGTGATTTCTGGCTTCAAAGTAAACGCTC CCTCTGAGCTGCTGTGATTTCTGGCTTCAAAGTAAATGCTC < 41bp 1 0.673609585006717 1 0.588174760341644 experiment 0.652780829986565 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD105 ENSG00000209645 ncRNA_exonic Human snoRNA chr19:10218375 chr19:10218391 . . 0 37 hm5C_associated_SNPs_13274 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10218378-10218400
64251 chr19 10218391 10218391 1 + C T rs140010724 10218393 + 10218373 10218413 41 TTCTGGCTTCAAAGTAAACGCTCTGAAGAAGAGATGGGGCA TTCTGGCTTCAAAGTAAATGCTCTGAAGAAGAGATGGGGCA < 41bp 1 0.245436278806679 1 0.371623039245605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD105 ENSG00000209645 ncRNA_exonic Human snoRNA chr19:10218393 chr19:10218391 . . 0 19 hm5C_associated_SNPs_13275 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10218378-10218400
64251 chr19 10225370 10225370 1 + G A rs78052894 10225362 + 10225342 10225382 41 CCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGT CCAAGCCCTGCCCCTCAATGCCACAGCCACCCCTAAACCGT < 41bp 1 0.55733907441113 1 0.112845748662949 experiment 0.88532185117774 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225362 chr19:10225370 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_13278 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10225343-10225385
64251 chr19 10370403 10370403 1 + T C rs142765226 10370393 + 10370373 10370413 41 CTCTGGCAGGACTCACGTTACAGACCCCTCTACCCCTTCAG CTCTGGCAGGACTCACGTTACAGACCCCTCCACCCCTTCAG < 41bp 1 0.577573730824857 1 0.565484941005707 experiment 0.844852538350285 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10370393 chr19:10370403 nonsynonymous SNV 0.052 2 31 hm5C_associated_SNPs_13279 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:10370360-10370460
64251 chr19 10404990 10404990 1 + G A rs180744933 10404989 + 10404969 10405009 41 CAAAACAGTCGTCGTGAGCGCGGAGTGTGAGCGAGGCCCAG CAAAACAGTCGTCGTGAGCGCAGAGTGTGAGCGAGGCCCAG < 41bp 1 0.490468946185931 1 0.711774349212646 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10404989 chr19:10404990 synonymous SNV . 0 22 hm5C_associated_SNPs_13281 0 0 1 FXR2 POSTAR2 ENCODE chr19:10404980-10404990
64251 chr19 10654705 10654705 1 + C G rs10423320 10654715 + 10654695 10654735 41 TGCGGGTCGCCCTTGGGGGGCAGCGGCCGCAGCCCCCCACC TGCGGGTCGCGCTTGGGGGGCAGCGGCCGCAGCCCCCCACC < 41bp 1 0.717720333043111 1 0.704429745674133 experiment 0.564559333913778 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4D ENSG00000130734 UTR5 Human protein_coding chr19:10654715 chr19:10654705 . . 0 11 hm5C_associated_SNPs_13282 0 0 3 DDX3X POSTAR2 ENCODE chr19:10654585-10654744
64251 chr19 10794149 10794149 1 + C T rs143757354 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTTGCCCTTG < 41bp 1 0.412219525376473 1 0.0529824793338776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794149 synonymous SNV . 0 34 hm5C_associated_SNPs_13283 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr19 10794149 10794149 1 + C T rs143757354 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCCCTGACACCCCTCTTGCCCTTGATGCCA < 41bp 1 0.189602480289203 1 0.0576573312282562 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794149 synonymous SNV . 0 28 hm5C_associated_SNPs_13284 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr19 10794710 10794710 1 + T A rs111226263 10794699 + 10794679 10794719 41 AAGCAGCTGCAGTGTAGCGTCTGGGCCTGAGTTAGCAAAGG AAGCAGCTGCAGTGTAGCGTCTGGGCCTGAGATAGCAAAGG < 41bp 1 0.541189063480189 1 0.804585754871368 experiment 0.917621873039622 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10794699 chr19:10794710 . . 0 32 hm5C_associated_SNPs_13285 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:10794648-10794714
64251 chr19 10800091 10800091 1 + G A rs534424497 10800086 + 10800066 10800106 41 ATGTCAGCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCA ATGTCAGCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCA < 41bp 1 0.129145344192668 1 0.0568925738334656 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800086 chr19:10800091 . . 0 26 hm5C_associated_SNPs_13286 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800087 + 10800067 10800107 41 TGTCAGCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCAC TGTCAGCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCAC < 41bp 1 0.517492285581445 1 0.173723369836807 experiment 0.96501542883711 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800087 chr19:10800091 . . 0 25 hm5C_associated_SNPs_13287 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800088 + 10800068 10800108 41 GTCAGCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACG GTCAGCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACG < 41bp 1 0.0589855512777922 1 0.0200353264808655 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800088 chr19:10800091 . . 0 24 hm5C_associated_SNPs_13288 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800089 + 10800069 10800109 41 TCAGCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGT TCAGCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGT < 41bp 1 0.0684183288095327 1 0.0119904577732086 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800089 chr19:10800091 . . 0 23 hm5C_associated_SNPs_13289 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800090 + 10800070 10800110 41 CAGCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTT CAGCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTT < 41bp 1 0.144841130286474 1 0.117389172315598 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800090 chr19:10800091 . . 0 22 hm5C_associated_SNPs_13290 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800092 + 10800072 10800112 41 GCTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTTGC GCTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTTGC < 41bp 1 0.180774299915931 1 0.345335751771927 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800092 chr19:10800091 . . 0 20 hm5C_associated_SNPs_13291 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800093 + 10800073 10800113 41 CTGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTTGCT CTGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTTGCT < 41bp 1 0.248477292073619 1 0.495488524436951 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800093 chr19:10800091 . . 0 19 hm5C_associated_SNPs_13292 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800094 + 10800074 10800114 41 TGGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTTGCTG TGGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTTGCTG < 41bp 1 0.0711416053579627 1 0.069181352853775 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800094 chr19:10800091 . . 0 18 hm5C_associated_SNPs_13293 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800095 + 10800075 10800115 41 GGCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTTGCTGT GGCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTTGCTGT < 41bp 1 0.0298385618247095 1 0.0484367609024048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800095 chr19:10800091 . . 0 17 hm5C_associated_SNPs_13294 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10800091 10800091 1 + G A rs534424497 10800096 + 10800076 10800116 41 GCCCTCCAGGCCCCCGCCCCCATCCCGTCCACGTTGCTGTG GCCCTCCAGGCCCCCACCCCCATCCCGTCCACGTTGCTGTG < 41bp 1 0.108797835551836 1 0.0392794013023376 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10800096 chr19:10800091 . . 0 16 hm5C_associated_SNPs_13295 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10800058-10800115
64251 chr19 10886512 10886512 1 + T C rs77702567 10886497 + 10886477 10886517 41 CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAC CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCCGTCAC < 41bp 1 0.263093490905186 1 0.238194972276688 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886497 chr19:10886512 synonymous SNV . 0 36 hm5C_associated_SNPs_13296 4 0 11 FXR2 POSTAR2 GSE39682,GSM977620 chr19:10886499-10886518
64251 chr19 10893735 10893735 1 + C A rs3745674 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCAGGCCTA < 41bp 1 0.157413493571498 1 0.0808134078979492 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893735 nonsynonymous SNV 0.993 4 35 hm5C_associated_SNPs_13297 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr19 10893736 10893736 1 + G A rs199976453 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCAGCCTA < 41bp 1 0.172533653464937 1 0.0671450197696686 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893736 synonymous SNV . 0 36 hm5C_associated_SNPs_13298 3 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr19 10893739 10893739 1 + C A rs530978513 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCATA < 41bp 1 0.153271935385344 1 0.0453066825866699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893739 synonymous SNV . 0 39 hm5C_associated_SNPs_13299 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr19 10941872 10941872 1 + G A rs577028326 10941861 + 10941841 10941881 41 GCCTCTTCCTTAACGCTGGCCCCGGTCCAGGGCCGGCCCCT GCCTCTTCCTTAACGCTGGCCCCGGTCCAGGACCGGCCCCT < 41bp 1 0.348160466674051 1 0.151492178440094 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10941861 chr19:10941872 . . 0 32 hm5C_associated_SNPs_13300 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941841-10941872
64251 chr19 10942324 10942324 1 + C T rs185820576 10942310 + 10942290 10942330 41 AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCG AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCTGGGCCG < 41bp 1 0.518992506011914 1 0.536906242370605 experiment 0.962014987976172 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942310 chr19:10942324 . . 0 35 hm5C_associated_SNPs_13301 2 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942324 10942324 1 + C T rs185820576 10942323 + 10942303 10942343 41 CTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT CTAGGCCCGGAGCCGTTGGCCTGGGCCGGCCTTGCCCTATT < 41bp 1 0.686581578359733 1 0.776824176311493 experiment 0.626836843280535 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942323 chr19:10942324 . . 0 22 hm5C_associated_SNPs_13302 2 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942324 10942324 1 + C T rs185820576 10942328 + 10942308 10942348 41 CCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTCCTCT CCCGGAGCCGTTGGCCTGGGCCGGCCTTGCCCTATTCCTCT < 41bp 1 0.290122731070668 1 0.115175575017929 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942328 chr19:10942324 . . 0 17 hm5C_associated_SNPs_13303 2 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942324 10942324 1 + C T rs185820576 10942329 + 10942309 10942349 41 CCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTCCTCTC CCGGAGCCGTTGGCCTGGGCCGGCCTTGCCCTATTCCTCTC < 41bp 1 0.466043862103207 1 0.451324433088303 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942329 chr19:10942324 . . 0 16 hm5C_associated_SNPs_13304 2 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942330 10942330 1 + G A rs117954916 10942310 + 10942290 10942330 41 AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCG AGAGGTGCCTTTGCTAGGCCCGGAGCCGTTGGCCCGGGCCA < 41bp 1 0.519951088510045 1 0.606823563575745 experiment 0.96009782297991 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942310 chr19:10942330 . . 0 41 hm5C_associated_SNPs_13305 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942330 10942330 1 + G A rs117954916 10942323 + 10942303 10942343 41 CTAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATT CTAGGCCCGGAGCCGTTGGCCCGGGCCAGCCTTGCCCTATT < 41bp 1 0.503416024436849 1 0.896642208099365 experiment 0.993167951126303 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942323 chr19:10942330 . . 0 28 hm5C_associated_SNPs_13306 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942330 10942330 1 + G A rs117954916 10942324 + 10942304 10942344 41 TAGGCCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTC TAGGCCCGGAGCCGTTGGCCCGGGCCAGCCTTGCCCTATTC < 41bp 1 0.561114284756012 1 0.874695301055908 experiment 0.877771430487977 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942324 chr19:10942330 . . 0 27 hm5C_associated_SNPs_13307 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942330 10942330 1 + G A rs117954916 10942328 + 10942308 10942348 41 CCCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTCCTCT CCCGGAGCCGTTGGCCCGGGCCAGCCTTGCCCTATTCCTCT < 41bp 1 0.16895432300509 1 0.0640980899333954 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942328 chr19:10942330 . . 0 23 hm5C_associated_SNPs_13308 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 10942330 10942330 1 + G A rs117954916 10942329 + 10942309 10942349 41 CCGGAGCCGTTGGCCCGGGCCGGCCTTGCCCTATTCCTCTC CCGGAGCCGTTGGCCCGGGCCAGCCTTGCCCTATTCCTCTC < 41bp 1 0.402005269291904 1 0.166435569524765 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DNM2 ENSG00000079805 UTR3 Human protein_coding chr19:10942329 chr19:10942330 . . 0 22 hm5C_associated_SNPs_13309 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10942317-10942401
64251 chr19 11032424 11032424 1 + C T rs147684194 11032439 + 11032419 11032459 41 CACTACGGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC CACTATGGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC < 41bp 1 0.343712954181241 1 0.190934062004089 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CARM1 ENSG00000142453 CDS Human protein_coding chr19:11032439 chr19:11032424 synonymous SNV . 0 6 hm5C_associated_SNPs_13310 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11032418-11032439
64251 chr19 11032984 11032984 1 + C T rs562082626 11032999 + 11032979 11033019 41 GGCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGC GGCGCTGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGC < 41bp 1 0.35869461056627 1 0.313939452171326 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032999 chr19:11032984 . . 0 6 hm5C_associated_SNPs_13311 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032984 11032984 1 + C T rs562082626 11033000 + 11032980 11033020 41 GCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCC GCGCTGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCC < 41bp 1 0.407220119448362 1 0.471371650695801 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033000 chr19:11032984 . . 0 5 hm5C_associated_SNPs_13312 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032984 11032984 1 + C T rs562082626 11033001 + 11032981 11033021 41 CGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCC CGCTGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCC < 41bp 1 0.376825639512877 1 0.401855289936066 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033001 chr19:11032984 . . 0 4 hm5C_associated_SNPs_13313 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032986 11032986 1 + C T rs529371765 11032999 + 11032979 11033019 41 GGCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGC GGCGCCGTGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGC < 41bp 1 0.378660665848057 1 0.2834233045578 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032999 chr19:11032986 . . 0 8 hm5C_associated_SNPs_13314 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032986 11032986 1 + C T rs529371765 11033000 + 11032980 11033020 41 GCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCC GCGCCGTGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCC < 41bp 1 0.417059082693087 1 0.305575251579285 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033000 chr19:11032986 . . 0 7 hm5C_associated_SNPs_13315 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032986 11032986 1 + C T rs529371765 11033001 + 11032981 11033021 41 CGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCC CGCCGTGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCC < 41bp 1 0.38475683426078 1 0.276163280010223 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033001 chr19:11032986 . . 0 6 hm5C_associated_SNPs_13316 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11032986 11032986 1 + C T rs529371765 11033002 + 11032982 11033022 41 GCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCCC GCCGTGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCCC < 41bp 1 0.743876122242206 1 0.856669545173645 experiment 0.512247755515588 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033002 chr19:11032986 . . 0 5 hm5C_associated_SNPs_13317 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11032999 + 11032979 11033019 41 GGCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGC GGCGCCGCGGGGAGGGGTGGCCCCACCGAGGCTTCAGGGGC < 41bp 1 0.460557710248248 1 0.545105159282684 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032999 chr19:11033003 . . 0 25 hm5C_associated_SNPs_13318 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033000 + 11032980 11033020 41 GCGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCC GCGCCGCGGGGAGGGGTGGCCCCACCGAGGCTTCAGGGGCC < 41bp 1 0.214919568200466 1 0.506681203842163 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033000 chr19:11033003 . . 0 24 hm5C_associated_SNPs_13319 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033001 + 11032981 11033021 41 CGCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCC CGCCGCGGGGAGGGGTGGCCCCACCGAGGCTTCAGGGGCCC < 41bp 1 0.248607747594454 1 0.318134635686874 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033001 chr19:11033003 . . 0 23 hm5C_associated_SNPs_13320 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033002 + 11032982 11033022 41 GCCGCGGGGAGGGGTGGCCCCGCCGAGGCTTCAGGGGCCCC GCCGCGGGGAGGGGTGGCCCCACCGAGGCTTCAGGGGCCCC < 41bp 1 0.721552535866281 1 0.799823224544525 experiment 0.556894928267438 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033002 chr19:11033003 . . 0 22 hm5C_associated_SNPs_13321 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033019 + 11032999 11033039 41 CCCCGCCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTT CCCCACCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTT < 41bp 1 0.0440106333683162 1 0.15793189406395 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033019 chr19:11033003 . . 0 5 hm5C_associated_SNPs_13322 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033020 + 11033000 11033040 41 CCCGCCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTC CCCACCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTC < 41bp 1 0.0993687983162095 1 0.0246709287166595 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033020 chr19:11033003 . . 0 4 hm5C_associated_SNPs_13323 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033021 + 11033001 11033041 41 CCGCCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCA CCACCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCA < 41bp 1 0.0326397953305048 1 0.0389680564403534 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033021 chr19:11033003 . . 0 3 hm5C_associated_SNPs_13324 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033022 + 11033002 11033042 41 CGCCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCAC CACCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCAC < 41bp 1 0.0258237387418331 1 0.0442614257335663 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033022 chr19:11033003 . . 0 2 hm5C_associated_SNPs_13325 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11033003 11033003 1 + G A rs190617590 11033023 + 11033003 11033043 41 GCCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCACC ACCGAGGCTTCAGGGGCCCCCTCCCCACCAAAGGGTTCACC < 41bp 1 0.19028541789488 1 0.257799088954926 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11033023 chr19:11033003 . . 0 1 hm5C_associated_SNPs_13326 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr19 11105593 11105593 1 + A G rs17001075 11105582 + 11105562 11105602 41 TCACAGGCAAAATCCAGAAGCTGACCAAGGCAGTGGCCACG TCACAGGCAAAATCCAGAAGCTGACCAAGGCGGTGGCCACG < 41bp 1 0.153568184037677 1 0.149001628160477 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105582 chr19:11105593 synonymous SNV . 0 32 hm5C_associated_SNPs_13327 3 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:11105593-11105594
64251 chr19 11105608 11105608 1 + T C rs7935 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ACGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG < 41bp 1 0.660867964669002 1 0.659475326538086 experiment 0.678264070661996 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105608 synonymous SNV . 0 2 hm5C_associated_SNPs_13328 2 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:11105597-11105618
64251 chr19 11123738 11123738 1 + C T rs28997580 11123747 + 11123727 11123767 41 ATCACGTACCTCATGGAGCACAAACGCATCAATGGGCCCTT ATCACGTACCTTATGGAGCACAAACGCATCAATGGGCCCTT < 41bp 1 0.143761652454941 1 0.0921593904495239 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11123747 chr19:11123738 synonymous SNV . 0 12 hm5C_associated_SNPs_13329 3 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:11123714-11123776
64251 chr19 11145649 11145649 1 + C G rs377720149 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TGATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC < 41bp 1 0.0801047150169882 1 0.114065885543823 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145649 synonymous SNV . 0 2 hm5C_associated_SNPs_13330 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:11145649-11145650
64251 chr19 11145649 11145649 1 + C G rs377720149 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG GATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG < 41bp 1 0.233671459424592 1 0.183198243379593 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145649 synonymous SNV . 0 1 hm5C_associated_SNPs_13331 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:11145649-11145650
64251 chr19 11145691 11145691 1 + C T rs28997582 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGATG < 41bp 1 0.617362234420734 1 0.540599822998047 experiment 0.765275531158532 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145691 synonymous SNV . 0 40 hm5C_associated_SNPs_13332 2 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145691 11145691 1 + C T rs28997582 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGATGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.502773936541823 1 0.522314071655273 experiment 0.994452126916354 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145691 synonymous SNV . 0 8 hm5C_associated_SNPs_13333 2 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145691 11145691 1 + C T rs28997582 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGATGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.227121125874893 1 0.438113957643509 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145691 synonymous SNV . 0 5 hm5C_associated_SNPs_13334 2 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11242005 11242005 1 + A G rs72658871 11242009 + 11241989 11242029 41 GTGAACATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTT GTGAACATCTGCCTGGGGTCCCGTCCCTGCCCAGAACCCTT < 41bp 1 0.0799558796173325 1 0.229893982410431 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11242009 chr19:11242005 synonymous SNV . 0 17 hm5C_associated_SNPs_13335 1 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:11241981-11242190
64251 chr19 11553281 11553281 1 + T C rs62638749 11553280 + 11553260 11553300 41 GCGGACAGTGAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGG GCGGACAGTGAAGGAGGAAGCCGAGAAGCCAGAGAGAGAGG < 41bp 1 0.494311556746963 1 0.514611899852753 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553280 chr19:11553281 synonymous SNV . 0 22 hm5C_associated_SNPs_13338 2 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11553281 11553281 1 + T C rs62638749 11553288 + 11553268 11553308 41 TGAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGGCCAAAGAG TGAAGGAGGAAGCCGAGAAGCCAGAGAGAGAGGCCAAAGAG < 41bp 1 0.778605148198907 1 0.361094295978546 experiment 0.442789703602187 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553288 chr19:11553281 synonymous SNV . 0 14 hm5C_associated_SNPs_13339 2 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11553281 11553281 1 + T C rs62638749 11553289 + 11553269 11553309 41 GAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGGCCAAAGAGC GAAGGAGGAAGCCGAGAAGCCAGAGAGAGAGGCCAAAGAGC < 41bp 1 0.655672164622149 1 0.765582799911499 experiment 0.688655670755703 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553289 chr19:11553281 synonymous SNV . 0 13 hm5C_associated_SNPs_13340 2 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11559907 11559907 1 + A G rs34351170 11559894 + 11559874 11559914 41 CCCTGTGTCTCTCACAGCACCTGGGGCTCATGGATTGGCCC CCCTGTGTCTCTCACAGCACCTGGGGCTCATGGGTTGGCCC < 41bp 1 0.773682118776008 1 0.734150290489197 experiment 0.452635762447985 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559894 chr19:11559907 nonsynonymous SNV 0.957 1 34 hm5C_associated_SNPs_13341 2 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:11559903-11559937
64251 chr19 12903059 12903059 1 + C A rs2229510 12903078 + 12903058 12903098 41 CCCTGGGCGCTACCGGGGGGCCCCCGGCTGGGCCCGGGGGC CACTGGGCGCTACCGGGGGGCCCCCGGCTGGGCCCGGGGGC < 41bp 1 0.18753610805151 1 0.186268419027328 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12903078 chr19:12903059 synonymous SNV . 0 2 hm5C_associated_SNPs_13348 0 0 2 RBM15 POSTAR2 ENCODE chr19:12903055-12903099
64251 chr19 12903059 12903059 1 + C A rs2229510 12903079 + 12903059 12903099 41 CCTGGGCGCTACCGGGGGGCCCCCGGCTGGGCCCGGGGGCG ACTGGGCGCTACCGGGGGGCCCCCGGCTGGGCCCGGGGGCG < 41bp 1 0.543930461073197 1 0.507549524307251 experiment 0.912139077853606 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12903079 chr19:12903059 synonymous SNV . 0 1 hm5C_associated_SNPs_13349 0 0 2 RBM15 POSTAR2 ENCODE chr19:12903055-12903099
64251 chr19 12903106 12903106 1 + C G rs530685477 12903098 + 12903078 12903118 41 CCCCCGGCTGGGCCCGGGGGCGTCTACGCCGGCCCGGAGCC CCCCCGGCTGGGCCCGGGGGCGTCTACGGCGGCCCGGAGCC < 41bp 1 0.268401433927623 1 0.479060232639313 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12903098 chr19:12903106 nonsynonymous SNV 0.851 0 29 hm5C_associated_SNPs_13350 0 0 1 RPS3 POSTAR2 ENCODE chr19:12903069-12903123
64251 chr19 12923943 12923943 1 + C T rs147131347 12923946 + 12923926 12923966 41 CACGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTT CACGTGGAGCCTGTGTTTGGCTTCCCCCAGTTTGTCCGGTT < 41bp 1 0.162295872250755 1 0.0710262358188629 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12923946 chr19:12923943 synonymous SNV . 0 18 hm5C_associated_SNPs_13351 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:12923914-12923950
64251 chr19 13010516 13010516 1 + G A rs113720193 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTCATTCAGATGTGTTCCTTAAAAAGA < 41bp 1 0.470172972424154 1 0.503603160381317 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010516 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_13352 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:13010482-13010516
64251 chr19 13010520 13010520 1 + A G rs8012 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTCGTTCGGATGTGTTCCTTAAAAAGA < 41bp 1 0.409785217854589 1 0.405917853116989 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010520 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_13353 2 1 1 FUS POSTAR2 DRA001158,DRS012384 chr19:13010496-13010530
64251 chr19 13049446 13049446 1 + G A rs374628652 13049438 + 13049418 13049458 41 CGTCCGTCCGTACTGCAGAGCCGCTGCCGGAGGGTCGTTTT CGTCCGTCCGTACTGCAGAGCCGCTGCCAGAGGGTCGTTTT < 41bp 1 0.32995454886633 1 0.0384173691272736 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CALR ENSG00000179218 UTR5 Human protein_coding chr19:13049438 chr19:13049446 . . 0 29 hm5C_associated_SNPs_13354 0 0 27 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:13049440-13049460
64251 chr19 13049446 13049446 1 + G A rs374628652 13049445 + 13049425 13049465 41 CCGTACTGCAGAGCCGCTGCCGGAGGGTCGTTTTAAAGGGC CCGTACTGCAGAGCCGCTGCCAGAGGGTCGTTTTAAAGGGC < 41bp 1 0.775564198487251 1 0.555795609951019 experiment 0.448871603025497 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALR ENSG00000179218 UTR5 Human protein_coding chr19:13049445 chr19:13049446 . . 0 22 hm5C_associated_SNPs_13355 0 0 27 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:13049440-13049460
64251 chr19 13051170 13051170 1 + C G rs79497711 13051158 + 13051138 13051178 41 GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGCCACC GAGTCCGGCTCCTTGGAAGACGATTGGGACTTGCTGCCACC < 41bp 1 0.334613868041227 1 0.546430230140686 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051158 chr19:13051170 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_13356 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051170 13051170 1 + C G rs79497711 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTGCTGCCACCCAAGAAGATAAAG < 41bp 1 0.331920717308269 1 0.180354535579681 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051170 nonsynonymous SNV 0.994 1 20 hm5C_associated_SNPs_13357 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051170 13051170 1 + C G rs79497711 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTGCTGCCACCCAAGAAGATAAAGGATC < 41bp 1 0.394833471703001 1 0.134887158870697 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051170 nonsynonymous SNV 0.994 1 16 hm5C_associated_SNPs_13358 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051188 13051188 1 + A G rs534189742 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATGAAG < 41bp 1 0.364402948365459 1 0.286785662174225 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051188 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_13359 0 0 37 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051188 13051188 1 + A G rs534189742 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTGCCACCCAAGAAGATGAAGGATC < 41bp 1 0.39252243420242 1 0.0988755226135254 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051188 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_13360 0 0 37 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051212 13051212 1 + G A rs200486676 13051210 + 13051190 13051230 41 AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGG AGGATCCTGATGCTTCAAAACCAGAAGACTGGGATGAGCGG < 41bp 1 0.618179290643952 1 0.256723165512085 experiment 0.763641418712095 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051210 chr19:13051212 synonymous SNV . 0 23 hm5C_associated_SNPs_13361 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051201-13051225
64251 chr19 13054401 13054401 1 + A G rs140610430 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCGTACGCTGAGGAGTTTGGCAACGA < 41bp 1 0.507028281735713 1 0.113809049129486 experiment 0.985943436528575 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054401 synonymous SNV . 0 18 hm5C_associated_SNPs_13362 0 0 37 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:13054347-13054404
64251 chr19 13054401 13054401 1 + A G rs140610430 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCGTACGCTGAGGAGTTTGGCAACGAGA < 41bp 1 0.728864074733387 1 0.225777447223663 experiment 0.542271850533226 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054401 synonymous SNV . 0 16 hm5C_associated_SNPs_13363 0 0 37 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:13054347-13054404
64251 chr19 13054401 13054401 1 + A G rs140610430 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCGTACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC < 41bp 1 0.634340048632636 1 0.765494525432587 experiment 0.731319902734728 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054401 synonymous SNV . 0 3 hm5C_associated_SNPs_13364 0 0 37 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:13054347-13054404
64251 chr19 13054615 13054615 1 + A C rs143880510 13054601 + 13054581 13054621 41 GAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGA GAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGCGGCAGA < 41bp 1 0.599484554834281 1 0.574181497097015 experiment 0.801030890331439 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054601 chr19:13054615 nonsynonymous SNV 0.975 1 35 hm5C_associated_SNPs_13365 0 0 57 PTBP1 POSTAR2 GSE19323,GSM480479 chr19:13054600-13054620
64251 chr19 13056734 13056734 1 + C T rs45628632 13056739 + 13056719 13056759 41 GTTGTGTGAGGATCCCGGGGCCGCCGCGTCGCTCGGGCCCC GTTGTGTGAGGATCCTGGGGCCGCCGCGTCGCTCGGGCCCC < 41bp 1 0.429483277054711 1 0.200983047485352 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RAD23A ENSG00000179262 UTR5 Human protein_coding chr19:13056739 chr19:13056734 . . 0 16 hm5C_associated_SNPs_13366 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:13056680-13056740
64251 chr19 13206824 13206824 1 + C T rs555432273 13206816 + 13206796 13206836 41 ACACACCACAGGAAGTAGCTCTCCCCCCCAGCCCCCTCCTC ACACACCACAGGAAGTAGCTCTCCCCCCTAGCCCCCTCCTC < 41bp 1 0.247784456067446 1 0.471377342939377 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NFIX ENSG00000008441 UTR3 Human protein_coding chr19:13206816 chr19:13206824 . . 0 29 hm5C_associated_SNPs_13367 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:13206816-13206875
64251 chr19 13206824 13206824 1 + C T rs555432273 13206818 + 13206798 13206838 41 ACACCACAGGAAGTAGCTCTCCCCCCCAGCCCCCTCCTCCC ACACCACAGGAAGTAGCTCTCCCCCCTAGCCCCCTCCTCCC < 41bp 1 0.285196450354125 1 0.0544464886188507 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NFIX ENSG00000008441 UTR3 Human protein_coding chr19:13206818 chr19:13206824 . . 0 27 hm5C_associated_SNPs_13368 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:13206816-13206875
64251 chr19 13843084 13843084 1 + A G rs147584625 13843079 + 13843059 13843099 41 AGAGGCCCACCCTGGAGTAACCCTCACTGGAGAATCCAGAG AGAGGCCCACCCTGGAGTAACCCTCGCTGGAGAATCCAGAG < 41bp 1 0.0618235393757055 1 0.138804525136948 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 UTR5 Human protein_coding chr19:13843079 chr19:13843084 . . 0 26 hm5C_associated_SNPs_13369 0 0 1 SRSF1 POSTAR2 ENCODE chr19:13843024-13843110
64251 chr19 13869887 13869887 1 + A C rs367784673 13869880 + 13869860 13869900 41 GCCCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCT GCCCTGAGTCTGCGCTGGGGCCCCCAACGCCCAGCCGAGCT < 41bp 1 0.11314853261233 1 0.0487831234931946 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869880 chr19:13869887 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_13370 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869879-13869925
64251 chr19 13869887 13869887 1 + A C rs367784673 13869881 + 13869861 13869901 41 CCCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTC CCCTGAGTCTGCGCTGGGGCCCCCAACGCCCAGCCGAGCTC < 41bp 1 0.39780078856319 1 0.179655700922012 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869881 chr19:13869887 nonsynonymous SNV 0.001 0 27 hm5C_associated_SNPs_13371 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869879-13869925
64251 chr19 13869887 13869887 1 + A C rs367784673 13869882 + 13869862 13869902 41 CCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCT CCTGAGTCTGCGCTGGGGCCCCCAACGCCCAGCCGAGCTCT < 41bp 1 0.278688218916106 1 0.147364765405655 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869882 chr19:13869887 nonsynonymous SNV 0.001 0 26 hm5C_associated_SNPs_13372 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869879-13869925
64251 chr19 13869887 13869887 1 + A C rs367784673 13869883 + 13869863 13869903 41 CTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTG CTGAGTCTGCGCTGGGGCCCCCAACGCCCAGCCGAGCTCTG < 41bp 1 0.0768007293727978 1 0.458766102790833 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869883 chr19:13869887 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_13373 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869879-13869925
64251 chr19 13869887 13869887 1 + A C rs367784673 13869884 + 13869864 13869904 41 TGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTGA TGAGTCTGCGCTGGGGCCCCCAACGCCCAGCCGAGCTCTGA < 41bp 1 0.294408635604657 1 0.322276294231415 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869884 chr19:13869887 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_13374 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869879-13869925
64251 chr19 13884586 13884586 1 + C G rs147089928 13884585 + 13884565 13884605 41 GGGTTCAAGCGACTCTCCTGCCTCAGCCTCCCGAGTAGCTG GGGTTCAAGCGACTCTCCTGCGTCAGCCTCCCGAGTAGCTG < 41bp 1 0.538646452971075 1 0.225067973136902 experiment 0.922707094057851 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884585 chr19:13884586 . . 0 22 hm5C_associated_SNPs_13384 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884588 + 13884568 13884608 41 TTCAAGCGACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGA TTCAAGCGACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGA < 41bp 1 0.432747114046016 1 0.685507655143738 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884588 chr19:13884586 . . 0 19 hm5C_associated_SNPs_13385 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884591 + 13884571 13884611 41 AAGCGACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTA AAGCGACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGATTA < 41bp 1 0.113292706894127 1 0.0759863555431366 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884591 chr19:13884586 . . 0 16 hm5C_associated_SNPs_13386 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884592 + 13884572 13884612 41 AGCGACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAC AGCGACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGATTAC < 41bp 1 0.322955150959452 1 0.274484932422638 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884592 chr19:13884586 . . 0 15 hm5C_associated_SNPs_13387 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884594 + 13884574 13884614 41 CGACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAG CGACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGATTACAG < 41bp 1 0.675034765156707 1 0.366263389587402 experiment 0.649930469686586 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884594 chr19:13884586 . . 0 13 hm5C_associated_SNPs_13388 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884595 + 13884575 13884615 41 GACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGG GACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGATTACAGG < 41bp 1 0.308487432680744 1 0.693210303783417 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884595 chr19:13884586 . . 0 12 hm5C_associated_SNPs_13389 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13884586 13884586 1 + C G rs147089928 13884596 + 13884576 13884616 41 ACTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGA ACTCTCCTGCGTCAGCCTCCCGAGTAGCTGGGATTACAGGA < 41bp 1 0.663839605648047 1 0.628543972969055 experiment 0.672320788703907 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884596 chr19:13884586 . . 0 11 hm5C_associated_SNPs_13390 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr19 13888986 13888986 1 + G A rs138367753 13888997 + 13888977 13889017 41 GCAGCTGCCGCCACCTCCTCCAAGACACCTTCCTGAGGACG GCAGCTGCCACCACCTCCTCCAAGACACCTTCCTGAGGACG < 41bp 1 0.701334744392512 1 0.779729902744293 experiment 0.597330511214977 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13888997 chr19:13888986 nonsynonymous SNV 0.000 0 10 hm5C_associated_SNPs_13391 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:13888960-13889000
64251 chr19 14030642 14030642 1 + A G rs191830054 14030636 + 14030616 14030656 41 CGACTGGCCACCCAGGCTTCCCCCCAATCCAGGGCCTGGAG CGACTGGCCACCCAGGCTTCCCCCCAGTCCAGGGCCTGGAG < 41bp 1 0.0646634996910628 1 0.0391837656497955 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030636 chr19:14030642 nonsynonymous SNV 0.973 2 27 hm5C_associated_SNPs_13394 2 0 5 EFTUD2 POSTAR2 ENCODE chr19:14030628-14030672
64251 chr19 14142705 14142705 1 + C T rs113593439 14142724 + 14142704 14142744 41 CCCCTTTCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTG CTCCTTTCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTG < 41bp 1 0.358603137214667 1 0.413357883691788 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IL27RA ENSG00000104998 CDS Human protein_coding chr19:14142724 chr19:14142705 synonymous SNV . 0 2 hm5C_associated_SNPs_13396 0 0 2 DDX3X POSTAR2 ENCODE chr19:14142611-14142721
64251 chr19 14561832 14561832 1 + C T rs140044731 14561839 + 14561819 14561859 41 GAAGAGCTCGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG GAAGAGCTCGCTGTGGCCTCCTCCGCTGCCTTCAGCACCCG < 41bp 1 0.626145650072662 1 0.507423162460327 experiment 0.747708699854675 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561839 chr19:14561832 nonsynonymous SNV 0.100 0 14 hm5C_associated_SNPs_13397 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:14561820-14561840
64251 chr19 14574937 14574937 1 + G A rs114585039 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAGAAGAGCTCGCAGGATCCTCCTTCCAGCCCATCGAGC < 41bp 1 0.0557226432196962 1 0.0954462289810181 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574937 nonsynonymous SNV 0.000 0 16 hm5C_associated_SNPs_13398 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr19 14574959 14574959 1 + G A rs2230538 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCAAGC < 41bp 1 0.0574909384884429 1 0.215134829282761 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574959 synonymous SNV . 0 38 hm5C_associated_SNPs_13399 0 0 1 PPIG POSTAR2 ENCODE chr19:14574957-14574964
64251 chr19 14580192 14580192 1 + T C rs199587903 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCAGCGCGGGACACCCCTTCCTGGTGAACCTCTTC < 41bp 1 0.0450302523406401 1 0.164615422487259 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580192 synonymous SNV . 0 11 hm5C_associated_SNPs_13400 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580192 14580192 1 + T C rs199587903 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCAGCGCGGGACACCCCTTCCTGGTGAACCTCTTCG < 41bp 1 0.0203901231431754 1 0.124209403991699 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580192 synonymous SNV . 0 10 hm5C_associated_SNPs_13401 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580192 14580192 1 + T C rs199587903 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCAGCGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG < 41bp 1 0.425040032005589 1 0.706047594547272 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580192 synonymous SNV . 0 6 hm5C_associated_SNPs_13402 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580195 14580195 1 + G A rs114340231 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCAGTGCAGGACACCCCTTCCTGGTGAACCTCTTC < 41bp 1 0.0363896029276637 1 0.060499519109726 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580195 synonymous SNV . 0 14 hm5C_associated_SNPs_13403 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580195 14580195 1 + G A rs114340231 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCAGTGCAGGACACCCCTTCCTGGTGAACCTCTTCG < 41bp 1 0.0151917647410549 1 0.035011500120163 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580195 synonymous SNV . 0 13 hm5C_associated_SNPs_13404 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580195 14580195 1 + G A rs114340231 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCAGTGCAGGACACCCCTTCCTGGTGAACCTCTTCGGCTG < 41bp 1 0.372395092556646 1 0.615377068519592 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580195 synonymous SNV . 0 9 hm5C_associated_SNPs_13405 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14675889 14675889 1 + C T rs59273619 14675880 + 14675860 14675900 41 ATCCTGCTTCTCTGACAGATCTGCCAGCTCGGCAACTTCTC ATCCTGCTTCTCTGACAGATCTGCCAGCTTGGCAACTTCTC < 41bp 1 0.489369834854654 1 0.265589833259583 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14675880 chr19:14675889 synonymous SNV . 0 30 hm5C_associated_SNPs_13406 1 0 9 EFTUD2 POSTAR2 ENCODE chr19:14675836-14675892
64251 chr19 16243761 16243761 1 + G A rs182397992 16243766 + 16243746 16243786 41 GGAAAGAAGCCTGGAGCAGCCTCTCCTGTCCACAGCCAGGG GGAAAGAAGCCTGGAACAGCCTCTCCTGTCCACAGCCAGGG < 41bp 1 0.304341575125579 1 0.0736166834831238 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB8A ENSG00000269243 ncRNA_exonic Human antisense chr19:16243766 chr19:16243761 . . 0 16 hm5C_associated_SNPs_13410 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:16243709-16243768
64251 chr19 16314386 16314386 1 + G A rs141457321 16314393 + 16314373 16314413 41 TCCTGGCCCACGGGGGGGTCCGTTTCATGTGGATCAAACAC TCCTGGCCCACGGAGGGGTCCGTTTCATGTGGATCAAACAC < 41bp 1 0.0723848416900828 1 0.0837595760822296 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16314393 chr19:16314386 synonymous SNV . 0 14 hm5C_associated_SNPs_13411 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:16314380-16314407
64251 chr19 16990451 16990451 1 + C T rs527864176 16990450 + 16990430 16990470 41 CCTTTGTGGAACTCCGAGAGCCGCCCTGACAGTCCCAGCCG CCTTTGTGGAACTCCGAGAGCTGCCCTGACAGTCCCAGCCG < 41bp 1 0.689988205906633 1 0.0353815853595734 experiment 0.620023588186734 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SIN3B ENSG00000127511 UTR3 Human protein_coding chr19:16990450 chr19:16990451 . . 0 22 hm5C_associated_SNPs_13416 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:16990384-16990457
64251 chr19 16990470 16990470 1 + G A rs548015343 16990450 + 16990430 16990470 41 CCTTTGTGGAACTCCGAGAGCCGCCCTGACAGTCCCAGCCG CCTTTGTGGAACTCCGAGAGCCGCCCTGACAGTCCCAGCCA < 41bp 1 0.484536463984828 1 0.0420922636985779 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SIN3B ENSG00000127511 UTR3 Human protein_coding chr19:16990450 chr19:16990470 . . 0 41 hm5C_associated_SNPs_13417 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:16990427-16990470
64251 chr19 17316782 17316782 1 + T C rs7248508 17316775 + 17316755 17316795 41 CCCCGGCACTGCAGGGCGAGCCAGGCGTTGAGCCTGGCCAC CCCCGGCACTGCAGGGCGAGCCAGGCGCTGAGCCTGGCCAC < 41bp 1 0.246848123740964 1 0.623004972934723 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17316775 chr19:17316782 nonsynonymous SNV 0.005 1 28 hm5C_associated_SNPs_13418 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:17316780-17316800
64251 chr19 17322800 17322800 1 + T C rs117297085 17322803 + 17322783 17322823 41 AAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGACCCCCC AAGGCCGTCGTCCTTCGCAACGGTCAGAGTGAAGACCCCCC < 41bp 1 0.141119099570083 1 0.196796476840973 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322803 chr19:17322800 nonsynonymous SNV 0.924 1 18 hm5C_associated_SNPs_13419 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:17322799-17322800
64251 chr19 17323366 17323366 1 + C T rs150928154 17323349 + 17323329 17323369 41 ATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGCGGC ATGGACGCACCTGTGGGGAGCACCACATCTCCACCTGTGGC < 41bp 1 0.402709178391969 1 0.457244694232941 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYO9B ENSG00000099331 UTR3 Human protein_coding chr19:17323349 chr19:17323366 . . 0 38 hm5C_associated_SNPs_13420 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17323348-17323394
64251 chr19 17337656 17337656 1 + A C rs200411700 17337675 + 17337655 17337695 41 CACCCGCCTGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG CCCCCGCCTGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG < 41bp 1 0.733805235791114 1 0.555348217487335 experiment 0.532389528417772 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337675 chr19:17337656 nonsynonymous SNV 0.057 1 2 hm5C_associated_SNPs_13421 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:17337648-17337678
64251 chr19 17337659 17337659 1 + C A rs200297320 17337675 + 17337655 17337695 41 CACCCGCCTGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG CACCAGCCTGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG < 41bp 1 0.708044130782964 1 0.525772511959076 experiment 0.583911738434073 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337675 chr19:17337659 nonsynonymous SNV 0.201 2 5 hm5C_associated_SNPs_13422 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:17337648-17337678
64251 chr19 17337663 17337663 1 + T A rs199721272 17337675 + 17337655 17337695 41 CACCCGCCTGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG CACCCGCCAGGGCCTGGGCCCCCGGTGAGCCTGACCGGGAG < 41bp 1 0.687882326091135 1 0.510318875312805 experiment 0.624235347817731 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337675 chr19:17337663 synonymous SNV . 0 9 hm5C_associated_SNPs_13423 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:17337648-17337678
64251 chr19 17392890 17392890 1 + C A rs369002862 17392879 + 17392859 17392899 41 TTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGAC TTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGAGGCGCGGAC < 41bp 1 0.556876474237768 1 0.186009407043457 experiment 0.886247051524464 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17392879 chr19:17392890 stopgain 0.251 0 32 hm5C_associated_SNPs_13424 0 0 2 PPIG POSTAR2 ENCODE chr19:17392861-17392997
64251 chr19 17392894 17392894 1 + G A rs8100241 17392879 + 17392859 17392899 41 TTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGAC TTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCACGGAC < 41bp 1 0.532148644454254 1 0.240589946508408 experiment 0.935702711091491 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17392879 chr19:17392894 nonsynonymous SNV 0.145 3 36 hm5C_associated_SNPs_13425 0 1 1 PPIG POSTAR2 ENCODE chr19:17392861-17392997
64251 chr19 17424897 17424897 1 + C A rs185043934 17424890 + 17424870 17424910 41 CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGCCT CAATTTTAGTCGATTTCACGCGGACTCAGTGTGCAAAGCCT < 41bp 1 0.195088201753637 1 0.144187688827515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424890 chr19:17424897 synonymous SNV . 0 28 hm5C_associated_SNPs_13426 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:17424875-17424904
64251 chr19 17615414 17615414 1 + C T rs138685840 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGTCCT < 41bp 1 0.278987029648351 1 0.0760327279567719 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615414 nonsynonymous SNV 0.032 0 38 hm5C_associated_SNPs_13427 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr19 17688793 17688793 1 + G A rs13346446 17688792 + 17688772 17688812 41 GAACACCAGCCAGGTGGAGGCGCTGGGGATCCAGATGCTGC GAACACCAGCCAGGTGGAGGCACTGGGGATCCAGATGCTGC < 41bp 1 0.514045239745763 1 0.443356543779373 experiment 0.971909520508474 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COLGALT1 ENSG00000130309 CDS Human protein_coding chr19:17688792 chr19:17688793 synonymous SNV . 0 22 hm5C_associated_SNPs_13428 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17688773-17688799
64251 chr19 17693259 17693259 1 + T G rs114168906 17693278 + 17693258 17693298 41 TTGGCTTCTTTCCCACACACCTGAAGAGCACTGACTGTGTG TGGGCTTCTTTCCCACACACCTGAAGAGCACTGACTGTGTG < 41bp 1 0.617604695273204 1 0.347912609577179 experiment 0.764790609453592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693278 chr19:17693259 . . 0 2 hm5C_associated_SNPs_13438 0 0 23 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:17693157-17693260
64251 chr19 17693605 17693605 1 + C G rs562243796 17693623 + 17693603 17693643 41 GGCCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAG GGGCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAG < 41bp 1 0.484634200095036 1 0.118404030799866 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693623 chr19:17693605 . . 0 3 hm5C_associated_SNPs_13439 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17693579-17693611
64251 chr19 17693605 17693605 1 + C G rs562243796 17693624 + 17693604 17693644 41 GCCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGT GGCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGT < 41bp 1 0.295225832740678 1 0.161183804273605 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693624 chr19:17693605 . . 0 2 hm5C_associated_SNPs_13440 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17693579-17693611
64251 chr19 17693605 17693605 1 + C G rs562243796 17693625 + 17693605 17693645 41 CCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGTT GCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGTT < 41bp 1 0.41422860325147 1 0.264634490013123 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693625 chr19:17693605 . . 0 1 hm5C_associated_SNPs_13441 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17693579-17693611
64251 chr19 17693630 17693630 1 + G T rs180984411 17693623 + 17693603 17693643 41 GGCCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAG GGCCCCACGCCACATGTTAGCCCCCCTTGAGGGGGCGCCAG < 41bp 1 0.413493594187471 1 0.135678738355637 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693623 chr19:17693630 . . 0 28 hm5C_associated_SNPs_13442 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17693613-17693649
64251 chr19 17693630 17693630 1 + G T rs180984411 17693624 + 17693604 17693644 41 GCCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGT GCCCCACGCCACATGTTAGCCCCCCTTGAGGGGGCGCCAGT < 41bp 1 0.354439997532472 1 0.11800417304039 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693624 chr19:17693630 . . 0 27 hm5C_associated_SNPs_13443 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17693613-17693649
64251 chr19 17693630 17693630 1 + G T rs180984411 17693625 + 17693605 17693645 41 CCCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGTT CCCCACGCCACATGTTAGCCCCCCTTGAGGGGGCGCCAGTT < 41bp 1 0.349468411682217 1 0.192336767911911 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693625 chr19:17693630 . . 0 26 hm5C_associated_SNPs_13444 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17693613-17693649
64251 chr19 17693630 17693630 1 + G T rs180984411 17693626 + 17693606 17693646 41 CCCACGCCACATGTTAGCCCCCCTGGAGGGGGCGCCAGTTG CCCACGCCACATGTTAGCCCCCCTTGAGGGGGCGCCAGTTG < 41bp 1 0.224480225525126 1 0.0477709770202637 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693626 chr19:17693630 . . 0 25 hm5C_associated_SNPs_13445 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17693613-17693649
64251 chr19 17693918 17693918 1 + T C rs73524020 17693927 + 17693907 17693947 41 CTTCACCCTCTTGGGGATAACTTGCTTAGTTTTTTAATAAA CTTCACCCTCTCGGGGATAACTTGCTTAGTTTTTTAATAAA < 41bp 1 0.253627447220933 1 0.196140229701996 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COLGALT1 ENSG00000130309 UTR3 Human protein_coding chr19:17693927 chr19:17693918 . . 0 12 hm5C_associated_SNPs_13446 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17693833-17693933
64251 chr19 17836883 17836883 1 + G A rs116714292 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTCGAGCTGCTGGAGCCCCCAACCTCCGGGGGCTTCCT < 41bp 1 0.278121177820246 1 0.63157331943512 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836883 synonymous SNV . 0 24 hm5C_associated_SNPs_13447 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836883 17836883 1 + G A rs116714292 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTCGAGCTGCTGGAGCCCCCAACCTCCGGGGGCTTCCTCA < 41bp 1 0.331569046191684 1 0.409766346216202 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836883 synonymous SNV . 0 22 hm5C_associated_SNPs_13448 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836889 17836889 1 + C G rs181494116 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTCGAGCTGCTGGAGCCCCCGACCTCGGGGGGCTTCCT < 41bp 1 0.49867053856673 1 0.668494164943695 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836889 synonymous SNV . 0 30 hm5C_associated_SNPs_13449 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836889 17836889 1 + C G rs181494116 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTCGAGCTGCTGGAGCCCCCGACCTCGGGGGGCTTCCTCA < 41bp 1 0.391760640584286 1 0.768321871757507 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836889 synonymous SNV . 0 28 hm5C_associated_SNPs_13450 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17973414 17973414 1 + G A rs151028181 17973409 + 17973389 17973429 41 CCTCCCTGATTGCACCTAAACCCAAGAATCACTGTTTCTTA CCTCCCTGATTGCACCTAAACCCAAAAATCACTGTTTCTTA < 41bp 1 0.513339129524729 1 0.0330275297164917 experiment 0.973321740950541 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA68 ENSG00000207166 ncRNA_exonic Human snoRNA chr19:17973409 chr19:17973414 . . 0 26 hm5C_associated_SNPs_13452 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:17973396-17973414
64251 chr19 17973414 17973414 1 + G A rs151028181 17973410 + 17973390 17973430 41 CTCCCTGATTGCACCTAAACCCAAGAATCACTGTTTCTTAT CTCCCTGATTGCACCTAAACCCAAAAATCACTGTTTCTTAT < 41bp 1 0.333269976311858 1 0.169404983520508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA68 ENSG00000207166 ncRNA_exonic Human snoRNA chr19:17973410 chr19:17973414 . . 0 25 hm5C_associated_SNPs_13453 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:17973396-17973414
64251 chr19 17973414 17973414 1 + G A rs151028181 17973420 + 17973400 17973440 41 GCACCTAAACCCAAGAATCACTGTTTCTTATAGCGGTGGTT GCACCTAAACCCAAAAATCACTGTTTCTTATAGCGGTGGTT < 41bp 1 0.12528884025328 1 0.0349036455154419 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA68 ENSG00000207166 ncRNA_exonic Human snoRNA chr19:17973420 chr19:17973414 . . 0 15 hm5C_associated_SNPs_13454 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:17973396-17973414
64251 chr19 17973414 17973414 1 + G A rs151028181 17973426 + 17973406 17973446 41 AAACCCAAGAATCACTGTTTCTTATAGCGGTGGTTTAAACA AAACCCAAAAATCACTGTTTCTTATAGCGGTGGTTTAAACA < 41bp 1 0.083807298545029 1 0.0319676697254181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA68 ENSG00000207166 ncRNA_exonic Human snoRNA chr19:17973426 chr19:17973414 . . 0 9 hm5C_associated_SNPs_13455 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:17973396-17973414
64251 chr19 17973494 17973494 1 + C T rs374837687 17973493 + 17973473 17973513 41 TCGCCTTTGGGGGGCTGTGGCCGTGCCCCTCAAAGTGAATT TCGCCTTTGGGGGGCTGTGGCTGTGCCCCTCAAAGTGAATT < 41bp 1 0.349023541400948 1 0.064999908208847 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA68 ENSG00000207166 ncRNA_exonic Human snoRNA chr19:17973493 chr19:17973494 . . 0 22 hm5C_associated_SNPs_13456 0 0 20 FBL POSTAR2 GSE43666,GSM1067865 chr19:17973396-17973499
64251 chr19 17973752 17973752 1 + C A rs148256083 17973750 + 17973730 17973770 41 GAGACATGGGTGCCCGGCACCGCGCCCGAGCCCACTCCATT GAGACATGGGTGCCCGGCACCGAGCCCGAGCCCACTCCATT < 41bp 1 0.524231102584258 1 0.716185092926025 experiment 0.951537794831485 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL18A ENSG00000105640 CDS Human protein_coding chr19:17973750 chr19:17973752 synonymous SNV . 0 23 hm5C_associated_SNPs_13457 0 0 4 METAP2 POSTAR2 ENCODE chr19:17973726-17973759
64251 chr19 17973755 17973755 1 + C T rs374587280 17973750 + 17973730 17973770 41 GAGACATGGGTGCCCGGCACCGCGCCCGAGCCCACTCCATT GAGACATGGGTGCCCGGCACCGCGCTCGAGCCCACTCCATT < 41bp 1 0.657556104113132 1 0.471222758293152 experiment 0.684887791773735 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL18A ENSG00000105640 CDS Human protein_coding chr19:17973750 chr19:17973755 synonymous SNV . 0 26 hm5C_associated_SNPs_13458 0 0 3 METAP2 POSTAR2 ENCODE chr19:17973726-17973759
64251 chr19 18045988 18045988 1 + G A rs77851722 18045996 + 18045976 18046016 41 CTCCCAAAGCACGGGGATTACAAACGTGAGTGATCGCACCC CTCCCAAAGCACAGGGATTACAAACGTGAGTGATCGCACCC < 41bp 1 0.465838009177513 1 0.326624512672424 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC124 ENSG00000007080 UTR5 Human protein_coding chr19:18045996 chr19:18045988 . . 0 13 hm5C_associated_SNPs_13459 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:18045980-18046000
64251 chr19 18045988 18045988 1 + G A rs77851722 18046000 + 18045980 18046020 41 CAAAGCACGGGGATTACAAACGTGAGTGATCGCACCCGGCC CAAAGCACAGGGATTACAAACGTGAGTGATCGCACCCGGCC < 41bp 1 0.639270252028412 1 0.51215672492981 experiment 0.721459495943176 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC124 ENSG00000007080 UTR5 Human protein_coding chr19:18046000 chr19:18045988 . . 0 9 hm5C_associated_SNPs_13460 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:18045980-18046000
64251 chr19 18046000 18046000 1 + C T rs548714784 18045996 + 18045976 18046016 41 CTCCCAAAGCACGGGGATTACAAACGTGAGTGATCGCACCC CTCCCAAAGCACGGGGATTACAAATGTGAGTGATCGCACCC < 41bp 1 0.567304485811143 1 0.411503583192825 experiment 0.865391028377713 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC124 ENSG00000007080 UTR5 Human protein_coding chr19:18045996 chr19:18046000 . . 0 25 hm5C_associated_SNPs_13461 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:18045980-18046000
64251 chr19 18053557 18053557 1 + C G rs4808106 18053574 + 18053554 18053594 41 CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC CGGGAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC < 41bp 1 0.383126241619547 1 0.0548942089080811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053574 chr19:18053557 synonymous SNV . 0 4 hm5C_associated_SNPs_13462 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr19 18053557 18053557 1 + C G rs4808106 18053575 + 18053555 18053595 41 GGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCCG GGGAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCCG < 41bp 1 0.738349578165822 1 0.537675797939301 experiment 0.523300843668355 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053575 chr19:18053557 synonymous SNV . 0 3 hm5C_associated_SNPs_13463 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr19 18054643 18054643 1 + C T rs1052564 18054627 + 18054607 18054647 41 GTCACAGAGCGTTCCGGGGGCCAAGGCGCCGGGCCCCGGGG GTCACAGAGCGTTCCGGGGGCCAAGGCGCCGGGCCCTGGGG < 41bp 1 0.555818285369777 1 0.594029903411865 experiment 0.888363429260446 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC124 ENSG00000007080 UTR3 Human protein_coding chr19:18054627 chr19:18054643 . . 0 37 hm5C_associated_SNPs_13464 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18054609-18054794
64251 chr19 18054643 18054643 1 + C T rs1052564 18054640 + 18054620 18054660 41 CCGGGGGCCAAGGCGCCGGGCCCCGGGGCCATGCTCTTATC CCGGGGGCCAAGGCGCCGGGCCCTGGGGCCATGCTCTTATC < 41bp 1 0.41984450964304 1 0.10975781083107 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC124 ENSG00000007080 UTR3 Human protein_coding chr19:18054640 chr19:18054643 . . 0 24 hm5C_associated_SNPs_13465 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18054609-18054794
64251 chr19 18054643 18054643 1 + C T rs1052564 18054641 + 18054621 18054661 41 CGGGGGCCAAGGCGCCGGGCCCCGGGGCCATGCTCTTATCA CGGGGGCCAAGGCGCCGGGCCCTGGGGCCATGCTCTTATCA < 41bp 1 0.376437650053643 1 0.544524967670441 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CCDC124 ENSG00000007080 UTR3 Human protein_coding chr19:18054641 chr19:18054643 . . 0 23 hm5C_associated_SNPs_13466 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18054609-18054794
64251 chr19 18280230 18280230 1 + T A rs57909410 18280214 + 18280194 18280234 41 ATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGG ATCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGATTGG < 41bp 1 0.615369008439404 1 0.85872495174408 experiment 0.769261983121192 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control PIK3R2 ENSG00000105647;ENSG00000268173 UTR3 Human other chr19:18280214 chr19:18280230 . . 0 37 hm5C_associated_SNPs_13471 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:18280208-18280244
64251 chr19 18280230 18280230 1 + T A rs57909410 18280215 + 18280195 18280235 41 TCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGTTTGGG TCCAGGGGTCCTCATTTCTCCGGCTCTGGCTCTTGATTGGG < 41bp 1 0.338452802420426 1 0.241852313280106 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control PIK3R2 ENSG00000105647;ENSG00000268173 UTR3 Human other chr19:18280215 chr19:18280230 . . 0 36 hm5C_associated_SNPs_13472 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:18280208-18280244
64251 chr19 18285944 18285944 1 + G A rs11554159 18285943 + 18285923 18285963 41 AAGCACTGTGCGGTGGCTGCCGAGCCTTCCTGATCCGGGAG AAGCACTGTGCGGTGGCTGCCAAGCCTTCCTGATCCGGGAG < 41bp 1 0.458218428306944 1 0.902614772319794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI30 ENSG00000216490 CDS Human protein_coding chr19:18285943 chr19:18285944 nonsynonymous SNV 0.009 1 22 hm5C_associated_SNPs_13474 0 1 6 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr19:18285932-18285954
64251 chr19 18288069 18288069 1 + A G rs7125 18288068 + 18288048 18288088 41 GACAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGG GACAGATGCTCTCCAGCCACCGCACGAGTATGTGCCCTGGG < 41bp 1 0.257020414905169 1 0.447340548038483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI30 ENSG00000216490 CDS Human protein_coding chr19:18288068 chr19:18288069 synonymous SNV . 0 22 hm5C_associated_SNPs_13475 0 0 4 RPS3 POSTAR2 ENCODE chr19:18288024-18288103
64251 chr19 18288069 18288069 1 + A G rs7125 18288070 + 18288050 18288090 41 CAGATGCTCTCCAGCCACCACACGAGTATGTGCCCTGGGTC CAGATGCTCTCCAGCCACCGCACGAGTATGTGCCCTGGGTC < 41bp 1 0.770232663848434 1 0.820320010185242 experiment 0.459534672303132 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI30 ENSG00000216490 CDS Human protein_coding chr19:18288070 chr19:18288069 synonymous SNV . 0 20 hm5C_associated_SNPs_13476 0 0 4 RPS3 POSTAR2 ENCODE chr19:18288024-18288103
64251 chr19 18451435 18451435 1 + A C rs570498910 18451440 + 18451420 18451460 41 AGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAACAG AGAGGCTGCAGCGGCCGCAGCTGTCGCGCCAGTCGCAACAG < 41bp 1 0.377953687086884 1 0.304143071174622 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PGPEP1 ENSG00000130517 UTR5 Human protein_coding chr19:18451440 chr19:18451435 . . 0 16 hm5C_associated_SNPs_13477 0 0 4 DDX3X POSTAR2 ENCODE chr19:18451399-18451532
64251 chr19 18451456 18451456 1 + A G rs553180914 18451440 + 18451420 18451460 41 AGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAACAG AGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCGACAG < 41bp 1 0.433306551736562 1 0.237459808588028 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PGPEP1 ENSG00000130517 UTR5 Human protein_coding chr19:18451440 chr19:18451456 . . 0 37 hm5C_associated_SNPs_13478 0 0 4 DDX3X POSTAR2 ENCODE chr19:18451399-18451532
64251 chr19 18451457 18451457 1 + A G rs2302946 18451440 + 18451420 18451460 41 AGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAACAG AGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAGTCGCAGCAG < 41bp 1 0.40753745468038 1 0.295652031898499 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PGPEP1 ENSG00000130517 UTR5 Human protein_coding chr19:18451440 chr19:18451457 . . 0 38 hm5C_associated_SNPs_13479 0 0 4 DDX3X POSTAR2 ENCODE chr19:18451399-18451532
64251 chr19 18530298 18530298 1 + C T rs539441578 18530295 + 18530275 18530315 41 TGGAGCCGCCGCTGCCGCCGCCGCCGCGGCCGTCTGGAGCT TGGAGCCGCCGCTGCCGCCGCCGTCGCGGCCGTCTGGAGCT < 41bp 1 0.263141108212438 1 0.69773268699646 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSBP4 ENSG00000130511 UTR5 Human protein_coding chr19:18530295 chr19:18530298 . . 0 24 hm5C_associated_SNPs_13480 0 0 10 BUD13 POSTAR2 ENCODE chr19:18530279-18530309
64251 chr19 18530298 18530298 1 + C T rs539441578 18530296 + 18530276 18530316 41 GGAGCCGCCGCTGCCGCCGCCGCCGCGGCCGTCTGGAGCTC GGAGCCGCCGCTGCCGCCGCCGTCGCGGCCGTCTGGAGCTC < 41bp 1 0.588012255730147 1 0.684276401996613 experiment 0.823975488539706 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSBP4 ENSG00000130511 UTR5 Human protein_coding chr19:18530296 chr19:18530298 . . 0 23 hm5C_associated_SNPs_13481 0 0 10 BUD13 POSTAR2 ENCODE chr19:18530279-18530309
64251 chr19 18542849 18542849 1 + C G rs538123528 18542868 + 18542848 18542888 41 CCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGGTAAGAGT CGTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGGTAAGAGT < 41bp 1 0.465882227823921 1 0.641592144966125 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18542868 chr19:18542849 nonsynonymous SNV 0.594 2 2 hm5C_associated_SNPs_13482 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:18542838-18542867
64251 chr19 18543841 18543841 1 + C T rs138143670 18543840 + 18543820 18543860 41 GAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG GAACCCCATCGGGCAGGGCGCTGGCAGGGCTAATGTGAGTG < 41bp 1 0.323105927126823 1 0.243281662464142 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543840 chr19:18543841 synonymous SNV . 0 22 hm5C_associated_SNPs_13483 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 18679351 18679351 1 + C T rs11086117 18679364 + 18679344 18679384 41 TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC TGAGCCCTGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC < 41bp 1 0.155002275412182 1 0.15251037478447 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679364 chr19:18679351 synonymous SNV . 0 8 hm5C_associated_SNPs_13484 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:18679295-18679361
64251 chr19 18679379 18679379 1 + C G rs7648 18679364 + 18679344 18679384 41 TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGGCTGGC < 41bp 1 0.128016294394771 1 0.188563138246536 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679364 chr19:18679379 nonsynonymous SNV 0.006 0 36 hm5C_associated_SNPs_13485 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:18679368-18679389
64251 chr19 18679655 18679655 1 + C T rs57907504 18679645 + 18679625 18679665 41 TCCTTCCTTCCTCAGAACATCTCTATTCTGCAAGACCCCTC TCCTTCCTTCCTCAGAACATCTCTATTCTGTAAGACCCCTC < 41bp 1 0.620243115189595 1 0.366653203964233 experiment 0.759513769620811 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000268983 ncRNA_intronic Human antisense chr19:18679645 chr19:18679655 . . 0 31 hm5C_associated_SNPs_13486 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:18679602-18679665
64251 chr19 18729275 18729275 1 + C A rs150780487 18729284 + 18729264 18729304 41 ACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT ACCCTGGTGACAGCGCCTGGCCAGCACCTCAAGTTCCAGGT < 41bp 1 0.201904131242174 1 0.298381209373474 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729284 chr19:18729275 synonymous SNV . 0 12 hm5C_associated_SNPs_13488 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:18729254-18729288
64251 chr19 18856649 18856649 1 + C T rs555463141 18856662 + 18856642 18856682 41 CAATCCTCGGGCCTGGACACCAGCCGGACCACCCGGCACCA CAATCCTTGGGCCTGGACACCAGCCGGACCACCCGGCACCA < 41bp 1 0.382116108810209 1 0.409990787506104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18856662 chr19:18856649 nonsynonymous SNV 0.998 0 8 hm5C_associated_SNPs_13489 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18856646-18856667
64251 chr19 18856649 18856649 1 + C T rs555463141 18856665 + 18856645 18856685 41 TCCTCGGGCCTGGACACCAGCCGGACCACCCGGCACCATGG TCCTTGGGCCTGGACACCAGCCGGACCACCCGGCACCATGG < 41bp 1 0.557817437936877 1 0.527554273605347 experiment 0.884365124126245 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18856665 chr19:18856649 nonsynonymous SNV 0.998 0 5 hm5C_associated_SNPs_13490 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18856646-18856667
64251 chr19 18967721 18967721 1 + C T rs34677724 18967720 + 18967700 18967740 41 CTGCTGCACATGTGTGGGCGCCGGTGACCCGAGGCTGGCCA CTGCTGCACATGTGTGGGCGCTGGTGACCCGAGGCTGGCCA < 41bp 1 0.4384921910059 1 0.433877825737 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18967720 chr19:18967721 synonymous SNV . 0 22 hm5C_associated_SNPs_13491 0 0 8 FMR1 POSTAR2 ENCODE chr19:18967709-18967757
64251 chr19 18967730 18967730 1 + G A rs146805409 18967720 + 18967700 18967740 41 CTGCTGCACATGTGTGGGCGCCGGTGACCCGAGGCTGGCCA CTGCTGCACATGTGTGGGCGCCGGTGACCCAAGGCTGGCCA < 41bp 1 0.238049086059939 1 0.533830285072327 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18967720 chr19:18967730 synonymous SNV . 0 31 hm5C_associated_SNPs_13492 0 0 8 FMR1 POSTAR2 ENCODE chr19:18967709-18967757
64251 chr19 18968335 18968335 1 + C T rs8103462 18968319 + 18968299 18968339 41 CAACATCTTCTACGAGGGCTCCCTCCAGAATGGTGTCACTG CAACATCTTCTACGAGGGCTCCCTCCAGAATGGTGTTACTG < 41bp 1 0.0223612639880214 1 0.037216454744339 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18968319 chr19:18968335 synonymous SNV . 0 37 hm5C_associated_SNPs_13493 0 0 4 FMR1 POSTAR2 ENCODE chr19:18968297-18968337
64251 chr19 18978228 18978228 1 + G A rs557581918 18978218 + 18978198 18978238 41 GTGAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGC GTGAGGAAGGTGCTTTTGGCCCCATTGCGAAGGGCCTTGGC < 41bp 1 0.315004435090368 1 0.0980013608932495 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978218 chr19:18978228 . . 0 31 hm5C_associated_SNPs_13494 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:18978220-18978240
64251 chr19 18978228 18978228 1 + G A rs557581918 18978219 + 18978199 18978239 41 TGAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGCC TGAGGAAGGTGCTTTTGGCCCCATTGCGAAGGGCCTTGGCC < 41bp 1 0.134616040897368 1 0.0929960012435913 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978219 chr19:18978228 . . 0 30 hm5C_associated_SNPs_13495 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:18978220-18978240
64251 chr19 18978228 18978228 1 + G A rs557581918 18978220 + 18978200 18978240 41 GAGGAAGGTGCTTTTGGCCCCATTGCGAGGGGCCTTGGCCA GAGGAAGGTGCTTTTGGCCCCATTGCGAAGGGCCTTGGCCA < 41bp 1 0.245185408567011 1 0.0716531276702881 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978220 chr19:18978228 . . 0 29 hm5C_associated_SNPs_13496 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:18978220-18978240
64251 chr19 18978228 18978228 1 + G A rs557581918 18978232 + 18978212 18978252 41 TTTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTG TTTGGCCCCATTGCGAAGGGCCTTGGCCAGGACTGGCCCTG < 41bp 1 0.149775987385988 1 0.0247873067855835 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978232 chr19:18978228 . . 0 17 hm5C_associated_SNPs_13497 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:18978220-18978240
64251 chr19 18978228 18978228 1 + G A rs557581918 18978233 + 18978213 18978253 41 TTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTGT TTGGCCCCATTGCGAAGGGCCTTGGCCAGGACTGGCCCTGT < 41bp 1 0.558409032844256 1 0.0731824338436127 experiment 0.883181934311487 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978233 chr19:18978228 . . 0 16 hm5C_associated_SNPs_13498 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:18978220-18978240
64251 chr19 18978250 18978250 1 + C T rs10416469 18978232 + 18978212 18978252 41 TTTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTG TTTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCTTG < 41bp 1 0.123429021364939 1 0.0201522707939148 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978232 chr19:18978250 . . 0 39 hm5C_associated_SNPs_13499 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18978226-18978267
64251 chr19 18978250 18978250 1 + C T rs10416469 18978233 + 18978213 18978253 41 TTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCCTGT TTGGCCCCATTGCGAGGGGCCTTGGCCAGGACTGGCCTTGT < 41bp 1 0.523336474737534 1 0.0616571605205536 experiment 0.953327050524932 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978233 chr19:18978250 . . 0 38 hm5C_associated_SNPs_13500 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18978226-18978267
64251 chr19 19030540 19030540 1 + C G rs2231991 19030530 + 19030510 19030550 41 ACACGGGCCCCTACAAGGGGCCCCTACAAGCGGCCACAAGG ACACGGGCCCCTACAAGGGGCCCCTACAAGGGGCCACAAGG < 41bp 1 0.0707897381915722 1 0.0464961230754852 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DDX49 ENSG00000105671 UTR5 Human protein_coding chr19:19030530 chr19:19030540 . . 0 31 hm5C_associated_SNPs_13501 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:19030540-19030560
64251 chr19 19030540 19030540 1 + C G rs2231991 19030531 + 19030511 19030551 41 CACGGGCCCCTACAAGGGGCCCCTACAAGCGGCCACAAGGA CACGGGCCCCTACAAGGGGCCCCTACAAGGGGCCACAAGGA < 41bp 1 0.105640954532728 1 0.0531685948371887 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DDX49 ENSG00000105671 UTR5 Human protein_coding chr19:19030531 chr19:19030540 . . 0 30 hm5C_associated_SNPs_13502 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:19030540-19030560
64251 chr19 19030540 19030540 1 + C G rs2231991 19030532 + 19030512 19030552 41 ACGGGCCCCTACAAGGGGCCCCTACAAGCGGCCACAAGGAT ACGGGCCCCTACAAGGGGCCCCTACAAGGGGCCACAAGGAT < 41bp 1 0.0248475561470643 1 0.114473193883896 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DDX49 ENSG00000105671 UTR5 Human protein_coding chr19:19030532 chr19:19030540 . . 0 29 hm5C_associated_SNPs_13503 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:19030540-19030560
64251 chr19 19035525 19035525 1 + C A rs140875596 19035531 + 19035511 19035551 41 GAGCAGCCCCCAGTCTCCTGCCAAGGGCACTCCCTCTTTTA GAGCAGCCCCCAGTATCCTGCCAAGGGCACTCCCTCTTTTA < 41bp 1 0.0935120414283053 1 0.335151731967926 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX49 ENSG00000105671;ENSG00000268193 intronic Human other chr19:19035531 chr19:19035525 . . 0 15 hm5C_associated_SNPs_13504 0 0 2 PRPF8 POSTAR2 ENCODE chr19:19035478-19035548
64251 chr19 19035537 19035537 1 + G A rs59107085 19035531 + 19035511 19035551 41 GAGCAGCCCCCAGTCTCCTGCCAAGGGCACTCCCTCTTTTA GAGCAGCCCCCAGTCTCCTGCCAAGGACACTCCCTCTTTTA < 41bp 1 0.0971555587460865 1 0.402868002653122 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX49 ENSG00000105671;ENSG00000268193 intronic Human other chr19:19035531 chr19:19035537 . . 0 27 hm5C_associated_SNPs_13505 0 0 2 PRPF8 POSTAR2 ENCODE chr19:19035478-19035548
64251 chr19 19039080 19039080 1 + G A rs35412126 19039092 + 19039072 19039112 41 AGGACACCGTCTGGGTCCCACTCAGGCCCAGTCCCCTCCCA AGGACACCATCTGGGTCCCACTCAGGCCCAGTCCCCTCCCA < 41bp 1 0.77767227498135 1 0.791572868824005 experiment 0.4446554500373 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control DDX49 ENSG00000105671 CDS Human protein_coding chr19:19039092 chr19:19039080 synonymous SNV . 0 9 hm5C_associated_SNPs_13506 0 0 1 RPS3 POSTAR2 ENCODE chr19:19039072-19039158
64251 chr19 19223527 19223527 1 + C G rs536724104 19223542 + 19223522 19223562 41 CACCCCTGCACACAGCCAGGCCCTCAGGCTCTGCGGTCACT CACCCGTGCACACAGCCAGGCCCTCAGGCTCTGCGGTCACT < 41bp 1 0.0858985399154284 1 0.0142191052436829 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A42 ENSG00000181035 UTR3 Human protein_coding chr19:19223542 chr19:19223527 . . 0 6 hm5C_associated_SNPs_13507 0 0 2 DDX6 POSTAR2 ENCODE chr19:19223468-19223532
64251 chr19 19467996 19467996 1 + T A rs2285628 19468003 + 19467983 19468023 41 ATAACCCCCTTCCTCACTGGCCACCACCTGACATCAGCACC ATAACCCCCTTCCACACTGGCCACCACCTGACATCAGCACC < 41bp 1 0.0663473674105195 1 0.0223898887634277 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAU2 ENSG00000129933 UTR3 Human protein_coding chr19:19468003 chr19:19467996 . . 0 14 hm5C_associated_SNPs_13509 0 0 3 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:19467979-19468001
64251 chr19 19605132 19605132 1 + C T rs146134903 19605126 + 19605106 19605146 41 ACAGGTTCTGTTGGGAGCACCGTGACCACCCCTCCCCCGCT ACAGGTTCTGTTGGGAGCACCGTGACTACCCCTCCCCCGCT < 41bp 1 0.688316971073256 1 0.733365416526794 experiment 0.623366057853488 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19605126 chr19:19605132 synonymous SNV . 0 27 hm5C_associated_SNPs_13510 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19605132-19605133
64251 chr19 19605144 19605144 1 + G A rs200171655 19605126 + 19605106 19605146 41 ACAGGTTCTGTTGGGAGCACCGTGACCACCCCTCCCCCGCT ACAGGTTCTGTTGGGAGCACCGTGACCACCCCTCCCCCACT < 41bp 1 0.588538547976629 1 0.687827050685883 experiment 0.822922904046742 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19605126 chr19:19605144 synonymous SNV . 0 39 hm5C_associated_SNPs_13511 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:19605135-19605146
64251 chr19 19852269 19852269 1 + G A rs73924851 19852265 + 19852245 19852285 41 ACTTCAGCCCAGGTTCGATTCCTGGTCAGGGAACCAGTGCC ACTTCAGCCCAGGTTCGATTCCTGATCAGGGAACCAGTGCC < 41bp 1 0.395178735595411 1 0.317696571350098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF14;LINC00663 ENSG00000105708;ENSG00000271499 intergenic Human other chr19:19852265 chr19:19852269 . . 0 25 hm5C_associated_SNPs_13517 0 0 3 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:19852252-19852273
64251 chr19 19852269 19852269 1 + G A rs73924851 19852266 + 19852246 19852286 41 CTTCAGCCCAGGTTCGATTCCTGGTCAGGGAACCAGTGCCA CTTCAGCCCAGGTTCGATTCCTGATCAGGGAACCAGTGCCA < 41bp 1 0.445448711744151 1 0.135593682527542 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF14;LINC00663 ENSG00000105708;ENSG00000271499 intergenic Human other chr19:19852266 chr19:19852269 . . 0 24 hm5C_associated_SNPs_13518 0 0 3 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:19852252-19852273
64251 chr19 21301023 21301023 1 + T G rs111990779 21301004 + 21300984 21301024 41 TGGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTA TGGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACGA < 41bp 1 0.434364295652644 1 0.164830923080444 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301004 chr19:21301023 nonsynonymous SNV 0.001 0 40 hm5C_associated_SNPs_13526 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301023 21301023 1 + T G rs111990779 21301005 + 21300985 21301025 41 GGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAG GGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACGAG < 41bp 1 0.0636192563007238 1 0.188514769077301 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301005 chr19:21301023 nonsynonymous SNV 0.001 0 39 hm5C_associated_SNPs_13527 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301023 21301023 1 + T G rs111990779 21301006 + 21300986 21301026 41 GTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAGG GTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACGAGG < 41bp 1 0.666402184199112 1 0.31659659743309 experiment 0.667195631601775 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301006 chr19:21301023 nonsynonymous SNV 0.001 0 38 hm5C_associated_SNPs_13528 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 24010071 24010071 1 + C A rs9305011 24010069 + 24010049 24010089 41 ATCTTGACTTCCAGATGGAACACTACATCTATAAAAGGAAA ATCTTGACTTCCAGATGGAACAATACATCTATAAAAGGAAA < 41bp 1 0.254162666028013 1 0.588201761245728 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RPSAP58 ENSG00000205246 CDS Human other chr19:24010069 chr19:24010071 nonsynonymous SNV 0.957 0 23 hm5C_associated_SNPs_13535 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:24010060-24010100
64251 chr19 28296537 28296537 1 + G C rs149208046 28296528 + 28296508 28296548 41 TCCAGGTCTCGCATCTGGGGCTCGATCTCGTGCAGAGGAGC TCCAGGTCTCGCATCTGGGGCTCGATCTCCTGCAGAGGAGC < 41bp 1 0.439626366237074 1 0.604474723339081 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296528 chr19:28296537 . . 0 30 hm5C_associated_SNPs_13542 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:28296527-28296555
64251 chr19 28296698 28296698 1 + G C rs62114567 28296706 + 28296686 28296726 41 AGCCCTGCTTCAGCACGGGGCCTGTGGGGCCCCGGTAAGTC AGCCCTGCTTCACCACGGGGCCTGTGGGGCCCCGGTAAGTC < 41bp 1 0.0540698944164098 1 0.0692661702632904 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296706 chr19:28296698 . . 0 13 hm5C_associated_SNPs_13543 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 28296698 28296698 1 + G C rs62114567 28296707 + 28296687 28296727 41 GCCCTGCTTCAGCACGGGGCCTGTGGGGCCCCGGTAAGTCC GCCCTGCTTCACCACGGGGCCTGTGGGGCCCCGGTAAGTCC < 41bp 1 0.392040791828205 1 0.335968255996704 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296707 chr19:28296698 . . 0 12 hm5C_associated_SNPs_13544 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 28296698 28296698 1 + G C rs62114567 28296715 + 28296695 28296735 41 TCAGCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTC TCACCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTC < 41bp 1 0.328479010459998 1 0.199256837368011 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296715 chr19:28296698 . . 0 4 hm5C_associated_SNPs_13545 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 28296698 28296698 1 + G C rs62114567 28296716 + 28296696 28296736 41 CAGCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCC CACCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCC < 41bp 1 0.433289630968253 1 0.429349660873413 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296716 chr19:28296698 . . 0 3 hm5C_associated_SNPs_13546 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 28296698 28296698 1 + G C rs62114567 28296717 + 28296697 28296737 41 AGCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCC ACCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCC < 41bp 1 0.430406945079351 1 0.413148671388626 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296717 chr19:28296698 . . 0 2 hm5C_associated_SNPs_13547 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 28296698 28296698 1 + G C rs62114567 28296718 + 28296698 28296738 41 GCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCCG CCACGGGGCCTGTGGGGCCCCGGTAAGTCCCGGTGTTCCCG < 41bp 1 0.660647942019696 1 0.731532335281372 experiment 0.678704115960608 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC101927151 ENSG00000267323;ENSG00000267575 ncRNA_exonic Human other chr19:28296718 chr19:28296698 . . 0 1 hm5C_associated_SNPs_13548 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:28296671-28296720
64251 chr19 30097214 30097214 1 + A G rs199911160 30097216 + 30097196 30097236 41 TCATCAGAGAGCGCCGGAAGCGGTCCGAGAATGAAGAGTAA TCATCAGAGAGCGCCGGAGGCGGTCCGAGAATGAAGAGTAA < 41bp 1 0.543410742281022 1 0.488448530435562 experiment 0.913178515437956 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control POP4 ENSG00000105171 UTR5 Human protein_coding chr19:30097216 chr19:30097214 . . 0 19 hm5C_associated_SNPs_13549 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:30097200-30097220
64251 chr19 30097231 30097231 1 + G A rs150671362 30097216 + 30097196 30097236 41 TCATCAGAGAGCGCCGGAAGCGGTCCGAGAATGAAGAGTAA TCATCAGAGAGCGCCGGAAGCGGTCCGAGAATGAAAAGTAA < 41bp 1 0.595619905612459 1 0.605425477027893 experiment 0.808760188775081 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control POP4 ENSG00000105171 CDS Human protein_coding chr19:30097216 chr19:30097231 synonymous SNV . 0 36 hm5C_associated_SNPs_13550 0 0 1 DDX3X POSTAR2 ENCODE chr19:30097196-30097233
64251 chr19 30506116 30506116 1 + C A rs166731 30506096 + 30506076 30506116 41 ATCCTGAGTTACTTTGGCAACAAGTTCTTTTACCCTTACCC ATCCTGAGTTACTTTGGCAACAAGTTCTTTTACCCTTACCA < 41bp 1 0.449697597133791 1 0.397938102483749 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control URI1 ENSG00000105176 UTR3 Human protein_coding chr19:30506096 chr19:30506116 . . 0 41 hm5C_associated_SNPs_13552 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30505870-30506234
64251 chr19 30936296 30936296 1 + A T rs61746682 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT TTTTTGTCTCACGGGCTGAACCAGACTCTCGAGTATAACCT < 41bp 1 0.344061679658093 1 0.1205213367939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936296 synonymous SNV . 0 9 hm5C_associated_SNPs_13553 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936273-30936300
64251 chr19 32973077 32973077 1 + C T rs7253039 32973083 + 32973063 32973103 41 AACCTGCCTCCCTACGTGGCCTACTTCACCAGAGTGTTCCA AACCTGCCTCCCTATGTGGCCTACTTCACCAGAGTGTTCCA < 41bp 1 0.199028989206463 1 0.0518320798873901 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32973083 chr19:32973077 synonymous SNV . 0 15 hm5C_associated_SNPs_13556 0 0 1 RBM15 POSTAR2 ENCODE chr19:32973073-32973215
64251 chr19 33202721 33202721 1 + C G rs202188892 33202731 + 33202711 33202751 41 GAAAAAAAGACTGAGGAAATCATGAAGGAAGGCAAGCAGTT GAAAAAAAGAGTGAGGAAATCATGAAGGAAGGCAAGCAGTT < 41bp 1 0.616120394844534 1 0.352740168571472 experiment 0.767759210310933 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202731 chr19:33202721 nonsynonymous SNV 0.975 0 11 hm5C_associated_SNPs_13557 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:33202665-33202757
64251 chr19 33203392 33203392 1 + A G rs187420283 33203372 + 33203352 33203392 41 GCAGTGGCCCAATCTCGGCTCACTGCAACCTCCACCTCCCA GCAGTGGCCCAATCTCGGCTCACTGCAACCTCCACCTCCCG < 41bp 1 0.573286898954391 1 0.0189563035964966 experiment 0.853426202091218 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT19 ENSG00000213965 UTR3 Human protein_coding chr19:33203372 chr19:33203392 . . 0 41 hm5C_associated_SNPs_13558 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:33203391-33203392
64251 chr19 33203392 33203392 1 + A G rs187420283 33203380 + 33203360 33203400 41 CCAATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCCAG CCAATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCCAG < 41bp 1 0.0698212229179429 1 0.224424421787262 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT19 ENSG00000213965 UTR3 Human protein_coding chr19:33203380 chr19:33203392 . . 0 33 hm5C_associated_SNPs_13559 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:33203391-33203392
64251 chr19 33203392 33203392 1 + A G rs187420283 33203381 + 33203361 33203401 41 CAATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCCAGC CAATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCCAGC < 41bp 1 0.797365488701177 1 0.89641535282135 experiment 0.405269022597647 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT19 ENSG00000213965 UTR3 Human protein_coding chr19:33203381 chr19:33203392 . . 0 32 hm5C_associated_SNPs_13560 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:33203391-33203392
64251 chr19 33203392 33203392 1 + A G rs187420283 33203386 + 33203366 33203406 41 TCGGCTCACTGCAACCTCCACCTCCCAGGTTCCAGCGATTC TCGGCTCACTGCAACCTCCACCTCCCGGGTTCCAGCGATTC < 41bp 1 0.0658006587628232 1 0.0610297918319702 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT19 ENSG00000213965 UTR3 Human protein_coding chr19:33203386 chr19:33203392 . . 0 27 hm5C_associated_SNPs_13561 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:33203391-33203392
64251 chr19 33465006 33465006 1 + G A rs78628256 33465022 + 33465002 33465042 41 ACCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT ACCCAGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT < 41bp 1 0.151696249660628 1 0.111209124326706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465022 chr19:33465006 nonsynonymous SNV 0.377 0 5 hm5C_associated_SNPs_13562 0 0 4 CPSF2 POSTAR2 GSE37401,GSM917670 chr19:33464996-33465029
64251 chr19 33465034 33465034 1 + A G rs146829849 33465022 + 33465002 33465042 41 ACCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT ACCCGGATGAGTGAACAATACTTCCCAGCCCTGCAGAAGTT < 41bp 1 0.168217427881005 1 0.181355088949203 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465022 chr19:33465034 synonymous SNV . 0 33 hm5C_associated_SNPs_13563 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:33464998-33465034
64251 chr19 33467676 33467676 1 + G A rs55853151 33467675 + 33467655 33467695 41 TAAAAACCAAGAGAATGGGCCGGGTGCACTGGCTCACGCCT TAAAAACCAAGAGAATGGGCCAGGTGCACTGGCTCACGCCT < 41bp 1 0.654706112957801 1 0.735170364379883 experiment 0.690587774084399 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FAAP24 ENSG00000131944 UTR3 Human protein_coding chr19:33467675 chr19:33467676 . . 0 22 hm5C_associated_SNPs_13564 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:33467621-33467680
64251 chr19 33586715 33586715 1 + G A rs147628604 33586722 + 33586702 33586742 41 CCCTGGAAGCTCGGAAGGATCTGAGGTATTGCATGGTGTGA CCCTGGAAGCTCGAAAGGATCTGAGGTATTGCATGGTGTGA < 41bp 1 0.747553941922667 1 0.102194100618362 experiment 0.504892116154666 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33586722 chr19:33586715 nonsynonymous SNV 0.991 2 14 hm5C_associated_SNPs_13565 0 0 4 BUD13 POSTAR2 ENCODE chr19:33586695-33586727
64251 chr19 33795467 33795467 1 + G A rs186271451 33795476 + 33795456 33795496 41 GGCTGATGAATGTGTGGGGGCGACAATGGCAAGGAGTGGGA GGCTGATGAATATGTGGGGGCGACAATGGCAAGGAGTGGGA < 41bp 1 0.632740393583765 1 0.251716673374176 experiment 0.73451921283247 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33795476 chr19:33795467 . . 0 12 hm5C_associated_SNPs_13566 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:33795460-33795480
64251 chr19 33872734 33872734 1 + G A rs74341460 33872738 + 33872718 33872758 41 AACTTTTGGAAAAATGGGTTCAAGCTTTCCTATTAGCCATG AACTTTTGGAAAAATGAGTTCAAGCTTTCCTATTAGCCATG < 41bp 1 0.499656887888224 1 0.181505411863327 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEBPG ENSG00000153879 UTR3 Human protein_coding chr19:33872738 chr19:33872734 . . 0 17 hm5C_associated_SNPs_13567 0 0 13 MOV10 POSTAR2 GSE37524,GSM921128 chr19:33872612-33872740
64251 chr19 34302354 34302354 1 + C T rs144406308 34302343 + 34302323 34302363 41 AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGT AAGGCCCTCATCGAGGAGGTCTTCCCCGAGATCGGAGACGT < 41bp 1 0.113430153365073 1 0.0258401930332184 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302343 chr19:34302354 nonsynonymous SNV 0.936 1 32 hm5C_associated_SNPs_13568 0 0 1 PPIG POSTAR2 ENCODE chr19:34302319-34302380
64251 chr19 34304668 34304668 1 + C T rs561662711 34304686 + 34304666 34304706 41 CACGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCAT CATGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCAT < 41bp 1 0.443907414508898 1 0.0649523735046387 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304686 chr19:34304668 . . 0 3 hm5C_associated_SNPs_13570 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:34304600-34304669
64251 chr19 34304668 34304668 1 + C T rs561662711 34304687 + 34304667 34304707 41 ACGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCATC ATGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCATC < 41bp 1 0.0724196060818477 1 0.0325369238853455 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304687 chr19:34304668 . . 0 2 hm5C_associated_SNPs_13571 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:34304600-34304669
64251 chr19 34304668 34304668 1 + C T rs561662711 34304688 + 34304668 34304708 41 CGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCATCT TGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCCCATCT < 41bp 1 0.134300701156276 1 0.0633639395236969 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304688 chr19:34304668 . . 0 1 hm5C_associated_SNPs_13572 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:34304600-34304669
64251 chr19 34663411 34663411 1 + C A rs376096113 34663423 + 34663403 34663443 41 GAGGGTAGCGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA GAGGGTAGAGGAGCCGGCGCCGCCGCCATGTTGGGTCTGAA < 41bp 1 0.745883878803282 1 0.452292710542679 experiment 0.508232242393437 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LSM14A ENSG00000257103 UTR5 Human protein_coding chr19:34663423 chr19:34663411 . . 0 9 hm5C_associated_SNPs_13573 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:34663385-34663415
64251 chr19 34843980 34843980 1 + C G rs538485719 34843967 + 34843947 34843987 41 ACACCAGCCCCTCAGAGGACCAGTGCGCCCCATCCCAGGGA ACACCAGCCCCTCAGAGGACCAGTGCGCCCCATGCCAGGGA < 41bp 1 0.449014693772484 1 0.550292789936066 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA0355 ENSG00000267219 ncRNA_intronic Human antisense chr19:34843967 chr19:34843980 . . 0 34 hm5C_associated_SNPs_13574 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:34843961-34844021
64251 chr19 34868642 34868642 1 + A G rs1801015 34868643 + 34868623 34868663 41 GCTATGTCTCCCCGCAGGGACCCCTCATGGTGACTGAAGCC GCTATGTCTCCCCGCAGGGGCCCCTCATGGTGACTGAAGCC < 41bp 1 0.0692805902265842 1 0.0913734138011932 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868643 chr19:34868642 synonymous SNV . 0 20 hm5C_associated_SNPs_13575 1 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868640-34868660
64251 chr19 34868642 34868642 1 + A G rs1801015 34868644 + 34868624 34868664 41 CTATGTCTCCCCGCAGGGACCCCTCATGGTGACTGAAGCCC CTATGTCTCCCCGCAGGGGCCCCTCATGGTGACTGAAGCCC < 41bp 1 0.0341949408758276 1 0.0517958700656891 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868644 chr19:34868642 synonymous SNV . 0 19 hm5C_associated_SNPs_13576 1 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868640-34868660
64251 chr19 34868642 34868642 1 + A G rs1801015 34868645 + 34868625 34868665 41 TATGTCTCCCCGCAGGGACCCCTCATGGTGACTGAAGCCCT TATGTCTCCCCGCAGGGGCCCCTCATGGTGACTGAAGCCCT < 41bp 1 0.105440405164696 1 0.181873351335526 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868645 chr19:34868642 synonymous SNV . 0 18 hm5C_associated_SNPs_13577 1 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868640-34868660
64251 chr19 34868776 34868776 1 + T C rs8191371 34868761 + 34868741 34868781 41 GGCCCAGCTGAACCCCGAGTCCTCCCTGTTCATCATTGCCT GGCCCAGCTGAACCCCGAGTCCTCCCTGTTCATCACTGCCT < 41bp 1 0.0396543806095054 1 0.040453314781189 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868761 chr19:34868776 nonsynonymous SNV 0.519 5 36 hm5C_associated_SNPs_13578 1 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr19:34868759-34868778
64251 chr19 34884795 34884795 1 + C G rs112683259 34884810 + 34884790 34884830 41 AGCTCCCACTCATCCTGCTCCTGTTTCAGGACCAGCACTTC AGCTCGCACTCATCCTGCTCCTGTTTCAGGACCAGCACTTC < 41bp 1 0.151230183442906 1 0.201515197753906 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPI ENSG00000105220 intronic Human protein_coding chr19:34884810 chr19:34884795 . . 0 6 hm5C_associated_SNPs_13579 0 0 2 SF3B4 POSTAR2 ENCODE chr19:34884769-34884818
64251 chr19 34891772 34891772 1 + C T rs539152330 34891752 + 34891732 34891772 41 CTATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAC CTATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAT < 41bp 1 0.50368239043212 1 0.349236726760864 experiment 0.992635219135759 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34891752 chr19:34891772 . . 0 41 hm5C_associated_SNPs_13580 0 0 4 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:34891740-34891780
64251 chr19 34891772 34891772 1 + C T rs539152330 34891753 + 34891733 34891773 41 TATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACACG TATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATG < 41bp 1 0.204755130689886 1 0.551311850547791 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34891753 chr19:34891772 . . 0 40 hm5C_associated_SNPs_13581 0 0 4 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:34891740-34891780
64251 chr19 34891772 34891772 1 + C T rs539152330 34891754 + 34891734 34891774 41 ATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACACGG ATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACATGG < 41bp 1 0.57251295868135 1 0.479038178920746 experiment 0.854974082637299 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34891754 chr19:34891772 . . 0 39 hm5C_associated_SNPs_13582 0 0 4 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:34891740-34891780
64251 chr19 34892417 34892417 1 + C T rs531562389 34892414 + 34892394 34892434 41 GGGATTACAGGCGTGAGCCACCGCGCCCAGCAAGGCGGGTC GGGATTACAGGCGTGAGCCACCGTGCCCAGCAAGGCGGGTC < 41bp 1 0.324283842547315 1 0.422531366348267 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34892414 chr19:34892417 . . 0 24 hm5C_associated_SNPs_13589 0 0 5 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:34892400-34892420
64251 chr19 34893009 34893009 1 + C T rs117782236 34892993 + 34892973 34893013 41 CAAAGTGCTGGGATTACAGGCGTGAGTCACCGCGCCCGGCT CAAAGTGCTGGGATTACAGGCGTGAGTCACCGCGCCTGGCT < 41bp 1 0.649459046550363 1 0.438807219266891 experiment 0.701081906899274 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34892993 chr19:34893009 . . 0 37 hm5C_associated_SNPs_13590 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893000 + 34892980 34893020 41 CTGGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTA CTGGGATTACAGGCGTGAGTCACCGCGCCTGGCTCATTTTA < 41bp 1 0.48323862508751 1 0.618626713752747 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893000 chr19:34893009 . . 0 30 hm5C_associated_SNPs_13591 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893002 + 34892982 34893022 41 GGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAA GGGATTACAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAA < 41bp 1 0.334169199196839 1 0.716130971908569 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893002 chr19:34893009 . . 0 28 hm5C_associated_SNPs_13592 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893003 + 34892983 34893023 41 GGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAA GGATTACAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAAA < 41bp 1 0.428542771505189 1 0.445573359727859 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893003 chr19:34893009 . . 0 27 hm5C_associated_SNPs_13593 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893005 + 34892985 34893025 41 ATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATT ATTACAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAAATT < 41bp 1 0.422210090555167 1 0.171571850776672 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893005 chr19:34893009 . . 0 25 hm5C_associated_SNPs_13594 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893007 + 34892987 34893027 41 TACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTT TACAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAAATTTT < 41bp 1 0.101834009547838 1 0.364064395427704 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893007 chr19:34893009 . . 0 23 hm5C_associated_SNPs_13595 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893009 34893009 1 + C T rs117782236 34893008 + 34892988 34893028 41 ACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTTT ACAGGCGTGAGTCACCGCGCCTGGCTCATTTTAAAATTTTT < 41bp 1 0.184272472858329 1 0.252963423728943 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893008 chr19:34893009 . . 0 22 hm5C_associated_SNPs_13596 0 0 17 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893000 + 34892980 34893020 41 CTGGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTA CTGGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTG < 41bp 1 0.521119591775887 1 0.773657202720642 experiment 0.957760816448227 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893000 chr19:34893020 . . 0 41 hm5C_associated_SNPs_13597 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893002 + 34892982 34893022 41 GGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAA GGGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAA < 41bp 1 0.383455632477492 1 0.577892184257507 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893002 chr19:34893020 . . 0 39 hm5C_associated_SNPs_13598 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893003 + 34892983 34893023 41 GGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAA GGATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAAA < 41bp 1 0.38876846003728 1 0.451696515083313 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893003 chr19:34893020 . . 0 38 hm5C_associated_SNPs_13599 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893005 + 34892985 34893025 41 ATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATT ATTACAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAAATT < 41bp 1 0.364950193943154 1 0.175459742546082 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893005 chr19:34893020 . . 0 36 hm5C_associated_SNPs_13600 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893007 + 34892987 34893027 41 TACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTT TACAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAAATTTT < 41bp 1 0.211333479783504 1 0.390177965164185 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893007 chr19:34893020 . . 0 34 hm5C_associated_SNPs_13601 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893008 + 34892988 34893028 41 ACAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTTT ACAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAAATTTTT < 41bp 1 0.101012646008259 1 0.213017046451569 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893008 chr19:34893020 . . 0 33 hm5C_associated_SNPs_13602 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34893020 34893020 1 + A G rs75203280 34893009 + 34892989 34893029 41 CAGGCGTGAGTCACCGCGCCCGGCTCATTTTAAAATTTTTG CAGGCGTGAGTCACCGCGCCCGGCTCATTTTGAAATTTTTG < 41bp 1 0.149304424108785 1 0.180521339178085 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPI ENSG00000105220 UTR3 Human protein_coding chr19:34893009 chr19:34893020 . . 0 32 hm5C_associated_SNPs_13603 0 0 40 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34892998-34893037
64251 chr19 34895337 34895337 1 + T C rs185898814 34895331 + 34895311 34895351 41 GTTTTCACCTGGTCGCCCGGCGGCCATGGCGGCCGTTCTGA GTTTTCACCTGGTCGCCCGGCGGCCACGGCGGCCGTTCTGA < 41bp 1 0.57181880304838 1 0.784583449363708 experiment 0.856362393903241 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34895331 chr19:34895337 nonsynonymous SNV 0.158 4 27 hm5C_associated_SNPs_13604 0 0 3 DDX3X POSTAR2 ENCODE chr19:34895312-34895443
64251 chr19 34954979 34954979 1 + G A rs373551149 34954995 + 34954975 34955015 41 AGCCGGCTTCAAGCAGATGACTTCCTCCAGGACTATACTTT AGCCAGCTTCAAGCAGATGACTTCCTCCAGGACTATACTTT < 41bp 1 0.146372299939911 1 0.0165172815322876 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34954995 chr19:34954979 nonsynonymous SNV 0.992 0 5 hm5C_associated_SNPs_13605 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34954933-34954980
64251 chr19 34959979 34959979 1 + A G rs7259160 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACGTTCTCATAGTTGATTCGGATGAAGAAGATTCTTCAA < 41bp 1 0.515941466280125 1 0.226070016622543 experiment 0.968117067439751 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959979 synonymous SNV . 0 22 hm5C_associated_SNPs_13606 0 0 1 TRA2A POSTAR2 ENCODE chr19:34959965-34960066
64251 chr19 34959998 34959998 1 + A C rs78770631 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAC < 41bp 1 0.474085612452019 1 0.290874063968658 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959998 nonsynonymous SNV 0.957 1 41 hm5C_associated_SNPs_13607 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003588 chr19:34959987-34960008
64251 chr19 34991239 34991239 1 + G A rs563982598 34991227 + 34991207 34991247 41 GTGTGGGTGTGGAGGGAGGGCCCGCGTGGGTGGCCCTGGTC GTGTGGGTGTGGAGGGAGGGCCCGCGTGGGTGACCCTGGTC < 41bp 1 0.599967867887938 1 0.385064244270325 experiment 0.800064264224125 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WTIP ENSG00000142279 UTR3 Human protein_coding chr19:34991227 chr19:34991239 . . 0 33 hm5C_associated_SNPs_13608 0 0 1 FAM120A POSTAR2 ENCODE chr19:34991200-34991273
64251 chr19 34991239 34991239 1 + G A rs563982598 34991228 + 34991208 34991248 41 TGTGGGTGTGGAGGGAGGGCCCGCGTGGGTGGCCCTGGTCA TGTGGGTGTGGAGGGAGGGCCCGCGTGGGTGACCCTGGTCA < 41bp 1 0.549394015405592 1 0.421017289161682 experiment 0.901211969188816 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WTIP ENSG00000142279 UTR3 Human protein_coding chr19:34991228 chr19:34991239 . . 0 32 hm5C_associated_SNPs_13609 0 0 1 FAM120A POSTAR2 ENCODE chr19:34991200-34991273
64251 chr19 35501051 35501051 1 + T C rs2290642 35501031 + 35501011 35501051 41 TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCC < 41bp 1 0.732572101320739 1 0.830146670341492 experiment 0.534855797358522 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501031 chr19:35501051 synonymous SNV . 0 41 hm5C_associated_SNPs_13610 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:35501040-35501055
64251 chr19 35504556 35504556 1 + G A rs146626930 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACACCCAACCTTTCCCGAGCCAGCAGCGA < 41bp 1 0.0204136352915167 1 0.0469517111778259 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504556 synonymous SNV . 0 15 hm5C_associated_SNPs_13611 0 0 3 DDX24 POSTAR2 ENCODE chr19:35504426-35504557
64251 chr19 35504556 35504556 1 + G A rs146626930 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACACCCAACCTTTCCCGAGCCAGCAGCGACGCAG < 41bp 1 0.724083595210037 1 0.0949767827987671 experiment 0.551832809579925 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504556 synonymous SNV . 0 10 hm5C_associated_SNPs_13612 0 0 3 DDX24 POSTAR2 ENCODE chr19:35504426-35504557
64251 chr19 35504580 35504580 1 + C T rs115996530 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGTGA < 41bp 1 0.0178676278513316 1 0.0554539263248444 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504580 synonymous SNV . 0 39 hm5C_associated_SNPs_13613 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35504580 35504580 1 + C T rs115996530 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGTGACGCAG < 41bp 1 0.759046723710672 1 0.262812912464142 experiment 0.481906552578657 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504580 synonymous SNV . 0 34 hm5C_associated_SNPs_13614 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35504583 35504583 1 + C T rs149214732 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGATGCAG < 41bp 1 0.734482731775792 1 0.0942374467849731 experiment 0.531034536448415 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504583 synonymous SNV . 0 37 hm5C_associated_SNPs_13615 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35741258 35741258 1 + C T rs141731488 35741270 + 35741250 35741290 41 AACCCCTACCACGTGGTGATCCTCTTCCAGCCTGTGACCCT AACCCCTATCACGTGGTGATCCTCTTCCAGCCTGTGACCCT < 41bp 1 0.101866727848207 1 0.0124954283237457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741270 chr19:35741258 nonsynonymous SNV 0.807 0 9 hm5C_associated_SNPs_13616 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:35741234-35741268
64251 chr19 35770174 35770174 1 + A G rs12742 35770164 + 35770144 35770184 41 GGGCACCCGGCAGTGACGCCCGCCACCACCACGCAGCCGCC GGGCACCCGGCAGTGACGCCCGCCACCACCGCGCAGCCGCC < 41bp 1 0.780082070505004 1 0.906700372695923 experiment 0.439835858989992 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USF2 ENSG00000105698 UTR3 Human protein_coding chr19:35770164 chr19:35770174 . . 0 31 hm5C_associated_SNPs_13617 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:35770163-35770184
64251 chr19 35770174 35770174 1 + A G rs12742 35770172 + 35770152 35770192 41 GGCAGTGACGCCCGCCACCACCACGCAGCCGCCGCCGCCCA GGCAGTGACGCCCGCCACCACCGCGCAGCCGCCGCCGCCCA < 41bp 1 0.779273348689785 1 0.856348276138306 experiment 0.441453302620429 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USF2 ENSG00000105698 UTR3 Human protein_coding chr19:35770172 chr19:35770174 . . 0 23 hm5C_associated_SNPs_13618 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:35770163-35770184
64251 chr19 35770174 35770174 1 + A G rs12742 35770175 + 35770155 35770195 41 AGTGACGCCCGCCACCACCACGCAGCCGCCGCCGCCCACGC AGTGACGCCCGCCACCACCGCGCAGCCGCCGCCGCCCACGC < 41bp 1 0.7726112357744 1 0.795927703380585 experiment 0.454777528451201 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USF2 ENSG00000105698 UTR3 Human protein_coding chr19:35770175 chr19:35770174 . . 0 20 hm5C_associated_SNPs_13619 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:35770163-35770184
64251 chr19 35773534 35773534 1 + C T rs145846674 35773554 + 35773534 35773574 41 CGCCAGCCTGACCAGTGGCTCTGTTTTCCCACAACAGGTGA TGCCAGCCTGACCAGTGGCTCTGTTTTCCCACAACAGGTGA < 41bp 1 0.365300790822522 1 0.113521546125412 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HAMP ENSG00000105697 CDS Human protein_coding chr19:35773554 chr19:35773534 synonymous SNV . 0 1 hm5C_associated_SNPs_13620 1 0 2 LARP4 POSTAR2 ENCODE chr19:35773436-35773579
64251 chr19 36066767 36066767 1 + G A rs148138218 36066751 + 36066731 36066771 41 AACTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCGGTAG AACTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCAGTAG < 41bp 1 0.326719186871445 1 0.180447936058044 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066751 chr19:36066767 . . 0 37 hm5C_associated_SNPs_13622 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36066767 36066767 1 + G A rs148138218 36066752 + 36066732 36066772 41 ACTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCGGTAGA ACTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCAGTAGA < 41bp 1 0.218342448593337 1 0.128813236951828 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066752 chr19:36066767 . . 0 36 hm5C_associated_SNPs_13623 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36066767 36066767 1 + G A rs148138218 36066753 + 36066733 36066773 41 CTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCGGTAGAG CTTTAAATGGGCAAGAAGCCCAGCTAGCTCAGTCAGTAGAG < 41bp 1 0.496569370422473 1 0.130264073610306 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066753 chr19:36066767 . . 0 35 hm5C_associated_SNPs_13624 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36066767 36066767 1 + G A rs148138218 36066756 + 36066736 36066776 41 TAAATGGGCAAGAAGCCCAGCTAGCTCAGTCGGTAGAGCAT TAAATGGGCAAGAAGCCCAGCTAGCTCAGTCAGTAGAGCAT < 41bp 1 0.147690534648541 1 0.109528183937073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066756 chr19:36066767 . . 0 32 hm5C_associated_SNPs_13625 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36066767 36066767 1 + G A rs148138218 36066762 + 36066742 36066782 41 GGCAAGAAGCCCAGCTAGCTCAGTCGGTAGAGCATAAGACT GGCAAGAAGCCCAGCTAGCTCAGTCAGTAGAGCATAAGACT < 41bp 1 0.200795739438678 1 0.460006415843964 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066762 chr19:36066767 . . 0 26 hm5C_associated_SNPs_13626 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36066778 36066778 1 + A G rs570993125 36066762 + 36066742 36066782 41 GGCAAGAAGCCCAGCTAGCTCAGTCGGTAGAGCATAAGACT GGCAAGAAGCCCAGCTAGCTCAGTCGGTAGAGCATAGGACT < 41bp 1 0.288171942907132 1 0.492672055959702 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target ATP4A;LINC01766 ENSG00000105675;ENSG00000224910 intergenic Human other chr19:36066762 chr19:36066778 . . 0 37 hm5C_associated_SNPs_13627 0 0 8 SSB POSTAR2 GSE95683,GSM2521600 chr19:36066754-36066781
64251 chr19 36104786 36104786 1 + C G rs147078031 36104795 + 36104775 36104815 41 TCAAGAAGATCCGGGGAAACCTACTCTGGTAACTGCTTCTT TCAAGAAGATCGGGGGAAACCTACTCTGGTAACTGCTTCTT < 41bp 1 0.556229813031398 1 0.131229341030121 experiment 0.887540373937204 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36104795 chr19:36104786 nonsynonymous SNV 0.983 2 12 hm5C_associated_SNPs_13628 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36104753-36104787
64251 chr19 36128510 36128510 1 + G A rs115413794 36128495 + 36128475 36128515 41 CGCTCCCACCTGGCCGGGCGCTGGCTCCTCCCTCAGTTCTC CGCTCCCACCTGGCCGGGCGCTGGCTCCTCCCTCAATTCTC < 41bp 1 0.562284912814567 1 0.170330315828323 experiment 0.875430174370867 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM42 ENSG00000126254 UTR3 Human protein_coding chr19:36128495 chr19:36128510 . . 0 36 hm5C_associated_SNPs_13629 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:36128476-36128520
64251 chr19 36142187 36142187 1 + C T rs7991 36142189 + 36142169 36142209 41 AATCAAGAACTACAAGACCGCCCCTTTTGACAGCCGCTTCC AATCAAGAACTACAAGACTGCCCCTTTTGACAGCCGCTTCC < 41bp 1 0.290548172341959 1 0.0407769680023193 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36142189 chr19:36142187 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_13630 2 0 23 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:36142132-36142206
64251 chr19 36216701 36216701 1 + G A rs146372727 36216704 + 36216684 36216724 41 TATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGGTGAG TATCCAACCCGGGCCACACGCAAACGGCGCCACTGGGTGAG < 41bp 1 0.229110230937744 1 0.472459077835083 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216704 chr19:36216701 synonymous SNV . 0 18 hm5C_associated_SNPs_13631 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36216682-36216709
64251 chr19 36227616 36227616 1 + G A rs138094783 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG CGAGCTCTGAGGAAGAACCTCCATCCCCAGATGATAAAGAG < 41bp 1 0.00945782867395756 1 0.194140583276749 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227616 synonymous SNV . 0 17 hm5C_associated_SNPs_13632 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36227590-36227626
64251 chr19 36278118 36278118 1 + G A rs202050153 36278132 + 36278112 36278152 41 TCCTGCGCCCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC TCCTGCACCCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC < 41bp 1 0.178798143395757 1 0.243954569101334 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278132 chr19:36278118 nonsynonymous SNV 0.971 1 7 hm5C_associated_SNPs_13633 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:36278100-36278120
64251 chr19 36278119 36278119 1 + C A rs551584144 36278132 + 36278112 36278152 41 TCCTGCGCCCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC TCCTGCGACCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC < 41bp 1 0.186311340062004 1 0.420599639415741 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278132 chr19:36278119 synonymous SNV . 0 8 hm5C_associated_SNPs_13634 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:36278100-36278120
64251 chr19 36370352 36370352 1 + C T rs2871778 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC CGCTTCCTGGAGGAACGACCCTGACCCGGCCCTCTTCACCC < 41bp 1 0.444352458208298 1 0.0509443879127502 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 UTR3 Human protein_coding chr19:36370340 chr19:36370352 . . 0 33 hm5C_associated_SNPs_13635 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:36370336-36370366
64251 chr19 36430798 36430798 1 + A C rs1057265 36430808 + 36430788 36430828 41 GTGCCGAGACACTGGAGGACCTCGACCTCTCCTACAACAAC GTGCCGAGACCCTGGAGGACCTCGACCTCTCCTACAACAAC < 41bp 1 0.791548062173901 1 0.458739221096039 experiment 0.416903875652199 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430808 chr19:36430798 synonymous SNV . 0 11 hm5C_associated_SNPs_13636 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:36430780-36430800
64251 chr19 36435935 36435935 1 + C A rs552870079 36435917 + 36435897 36435937 41 CGGCCACGAACCTGTGGGACCCTAGCCAGGCGCCCCCCCCT CGGCCACGAACCTGTGGGACCCTAGCCAGGCGCCCCCCACT < 41bp 1 0.13661162624639 1 0.0662969648838043 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRFN3 ENSG00000126243 UTR3 Human protein_coding chr19:36435917 chr19:36435935 . . 0 39 hm5C_associated_SNPs_13637 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:36435928-36436031
64251 chr19 36572460 36572460 1 + C T rs148667984 36572466 + 36572446 36572486 41 CACTGGCAGAAAAACATCTTCAGCAATGTGAGTGGCTTCCT CACTGGCAGAAAAATATCTTCAGCAATGTGAGTGGCTTCCT < 41bp 1 0.524171833097201 1 0.266712486743927 experiment 0.951656333805599 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36572466 chr19:36572460 synonymous SNV . 0 15 hm5C_associated_SNPs_13640 2 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36572383-36572460
64251 chr19 36593915 36593915 1 + T G rs61741470 36593911 + 36593891 36593931 41 TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGC TGAAGTCTCCAGAGGTCAAGCTCAGGGACCGAGGCGGAAGC < 41bp 1 0.491350524127261 1 0.468126326799393 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593911 chr19:36593915 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_13641 2 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:36593882-36593916
64251 chr19 36593915 36593915 1 + T G rs61741470 36593920 + 36593900 36593940 41 CAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGA CAGAGGTCAAGCTCAGGGACCGAGGCGGAAGCCAGCCCAGA < 41bp 1 0.452231429316259 1 0.806230247020721 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593920 chr19:36593915 nonsynonymous SNV 0.000 0 16 hm5C_associated_SNPs_13642 2 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:36593882-36593916
64251 chr19 36594063 36594063 1 + C A rs17851502 36594068 + 36594048 36594088 41 GTGCCTGCAGGTCCTCGCTGCAGGGAAGGCTGAAGAGACCC GTGCCTGCAGGTCCTAGCTGCAGGGAAGGCTGAAGAGACCC < 41bp 1 0.594202441424898 1 0.886410057544708 experiment 0.811595117150204 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36594068 chr19:36594063 synonymous SNV . 0 16 hm5C_associated_SNPs_13643 0 0 1 SF3B4 POSTAR2 ENCODE chr19:36594058-36594109
64251 chr19 36605981 36605981 1 - C T rs574083522 36605985 - 36605965 36606005 41 TACTATTCTGTAAACTGAGGCGGCGATGCCCAAAAATTGGA TACTATTCTGTAAACTGAGGCGGCAATGCCCAAAAATTGGA < 41bp 1 0.28563831114058 1 0.428865879774094 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLR2I;TBCB ENSG00000105254;ENSG00000105258 UTR5 Human other chr19:36605985 chr19:36605981 . . 0 25 hm5C_associated_SNPs_13644 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:36605964-36605989
64251 chr19 36606060 36606060 1 - G C rs533334515 36606050 - 36606030 36606070 41 CCTGGATGCTCAGTGTTTTGCGGTTTACGATGCGCATCGTT CCTGGATGCTGAGTGTTTTGCGGTTTACGATGCGCATCGTT < 41bp 1 0.298206247960575 1 0.522433519363403 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLR2I;TBCB ENSG00000105254;ENSG00000105258 UTR5 Human other chr19:36606050 chr19:36606060 . . 0 11 hm5C_associated_SNPs_13645 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:36606040-36606060
64251 chr19 38571961 38571961 1 + G A rs77088685 38571948 + 38571928 38571968 41 CTGGCGGGCGACCACAGCTACTGCCTGCTCTGCGCTACTGA CTGGCGGGCGACCACAGCTACTGCCTGCTCTGCACTACTGA < 41bp 1 0.160318854805036 1 0.14638763666153 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SIPA1L3 ENSG00000105738 UTR5 Human protein_coding chr19:38571948 chr19:38571961 . . 0 34 hm5C_associated_SNPs_13646 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:38571950-38571976
64251 chr19 38573333 38573333 1 + C T rs61729132 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC TGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC < 41bp 1 0.0806962882409554 1 0.0541912615299225 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573333 synonymous SNV . 0 1 hm5C_associated_SNPs_13647 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr19 38573347 38573347 1 + T C rs61729133 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC CGCCGCCTCGGCCACGGCCTCCCTCACGGCCTCGCGGGCCC < 41bp 1 0.0812265298990172 1 0.0821130573749542 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573347 nonsynonymous SNV 0.181 0 15 hm5C_associated_SNPs_13648 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr19 38573357 38573357 1 + C G rs61729134 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC CGCCGCCTCGGCCATGGCCTCCCTGACGGCCTCGCGGGCCC < 41bp 1 0.212888083983549 1 0.286471158266068 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573357 synonymous SNV . 0 25 hm5C_associated_SNPs_13649 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr19 38871622 38871622 1 + C T rs11541756 38871607 + 38871587 38871627 41 ATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCT ATCCCCGCCGAGAGCTACACCTTCTTCATTGACATTCTGCT < 41bp 1 0.111498690551802 1 0.0282100141048431 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38871607 chr19:38871622 synonymous SNV . 0 36 hm5C_associated_SNPs_13654 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:38871578-38871634
64251 chr19 39109861 39109861 1 + C G rs2232994 39109876 + 39109856 39109896 41 CGTGCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAG CGTGCGGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAG < 41bp 1 0.696093505548157 1 0.985603630542755 experiment 0.607812988903686 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109876 chr19:39109861 . . 0 6 hm5C_associated_SNPs_13655 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39109861 39109861 1 + C G rs2232994 39109878 + 39109858 39109898 41 TGCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGC TGCGGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGC < 41bp 1 0.264849043671154 1 0.590351223945618 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109878 chr19:39109861 . . 0 4 hm5C_associated_SNPs_13656 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39109861 39109861 1 + C G rs2232994 39109879 + 39109859 39109899 41 GCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGCG GCGGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGCG < 41bp 1 0.380579303274429 1 0.327955961227417 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109879 chr19:39109861 . . 0 3 hm5C_associated_SNPs_13657 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39109862 39109862 1 + G A rs2232995 39109876 + 39109856 39109896 41 CGTGCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAG CGTGCCAGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAG < 41bp 1 0.714119906433078 1 0.988301634788513 experiment 0.571760187133843 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109876 chr19:39109862 . . 0 7 hm5C_associated_SNPs_13658 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39109862 39109862 1 + G A rs2232995 39109878 + 39109858 39109898 41 TGCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGC TGCCAGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGC < 41bp 1 0.259890938721203 1 0.555396676063538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109878 chr19:39109862 . . 0 5 hm5C_associated_SNPs_13659 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39109862 39109862 1 + G A rs2232995 39109879 + 39109859 39109899 41 GCCGGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGCG GCCAGGTCAGTGTTAGCCTCCAGCCCTGGTTGTGGAAGGCG < 41bp 1 0.351925933469151 1 0.220101565122604 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 UTR5 Human protein_coding chr19:39109879 chr19:39109862 . . 0 4 hm5C_associated_SNPs_13660 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:39109820-39109920
64251 chr19 39125677 39125677 1 + G A rs138580388 39125664 + 39125644 39125684 41 AAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTC AAGGTGTGGATGAGCAAATACGGCTGGAGTGCCAACGAGTC < 41bp 1 0.713713132734387 1 0.35817214846611 experiment 0.572573734531225 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125664 chr19:39125677 nonsynonymous SNV 0.662 1 34 hm5C_associated_SNPs_13661 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr19 39125677 39125677 1 + G A rs138580388 39125675 + 39125655 39125695 41 GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCT GAGCAAATACGGCTGGAGTGCCAACGAGTCGGGGCAGATCT < 41bp 1 0.156068151473686 1 0.364366769790649 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125675 chr19:39125677 nonsynonymous SNV 0.662 1 23 hm5C_associated_SNPs_13662 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr19 39125677 39125677 1 + G A rs138580388 39125679 + 39125659 39125699 41 AAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCTTCAT AAATACGGCTGGAGTGCCAACGAGTCGGGGCAGATCTTCAT < 41bp 1 0.667640740655721 1 0.631798028945923 experiment 0.664718518688558 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125679 chr19:39125677 nonsynonymous SNV 0.662 1 19 hm5C_associated_SNPs_13663 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr19 39215172 39215172 1 + T C rs12986337 39215157 + 39215137 39215177 41 GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAACGTTGT < 41bp 1 0.798878016887832 1 0.820617437362671 experiment 0.402243966224336 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215157 chr19:39215172 synonymous SNV . 0 36 hm5C_associated_SNPs_13664 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215172 39215172 1 + T C rs12986337 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGCGCCGCCAGTTCGCCAGCCAGGCCAACGTTGTGGGGCC < 41bp 1 0.348714971383035 1 0.71685928106308 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215172 synonymous SNV . 0 30 hm5C_associated_SNPs_13665 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215172 39215172 1 + T C rs12986337 39215169 + 39215149 39215189 41 CGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT CGCCAGTTCGCCAGCCAGGCCAACGTTGTGGGGCCCTGGAT < 41bp 1 0.456183176742751 1 0.0534429848194122 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215169 chr19:39215172 synonymous SNV . 0 24 hm5C_associated_SNPs_13666 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215172 39215172 1 + T C rs12986337 39215182 + 39215162 39215202 41 GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATG GCCAGGCCAACGTTGTGGGGCCCTGGATCCAGACCAAGATG < 41bp 1 0.104352046794516 1 0.0367332398891449 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215182 chr19:39215172 synonymous SNV . 0 11 hm5C_associated_SNPs_13667 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215172 39215172 1 + T C rs12986337 39215184 + 39215164 39215204 41 CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGA CAGGCCAACGTTGTGGGGCCCTGGATCCAGACCAAGATGGA < 41bp 1 0.702907904581321 1 0.654009699821472 experiment 0.594184190837359 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215184 chr19:39215172 synonymous SNV . 0 9 hm5C_associated_SNPs_13668 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215172 39215172 1 + T C rs12986337 39215191 + 39215171 39215211 41 ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG ACGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG < 41bp 1 0.239533056881624 1 0.696608364582062 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215191 chr19:39215172 synonymous SNV . 0 2 hm5C_associated_SNPs_13669 1 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:39215154-39215173
64251 chr19 39215193 39215193 1 + G A rs145474119 39215182 + 39215162 39215202 41 GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATG GCCAGGCCAATGTTGTGGGGCCCTGGATCCAAACCAAGATG < 41bp 1 0.10421281362232 1 0.0395486950874329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215182 chr19:39215193 synonymous SNV . 0 32 hm5C_associated_SNPs_13670 1 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215193 39215193 1 + G A rs145474119 39215184 + 39215164 39215204 41 CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGA CAGGCCAATGTTGTGGGGCCCTGGATCCAAACCAAGATGGA < 41bp 1 0.71844888091096 1 0.552991569042206 experiment 0.56310223817808 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215184 chr19:39215193 synonymous SNV . 0 30 hm5C_associated_SNPs_13671 1 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215193 39215193 1 + G A rs145474119 39215191 + 39215171 39215211 41 ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG ATGTTGTGGGGCCCTGGATCCAAACCAAGATGGAGGTGAGG < 41bp 1 0.137484863404575 1 0.230004519224167 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215191 chr19:39215193 synonymous SNV . 0 23 hm5C_associated_SNPs_13672 1 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215193 39215193 1 + G A rs145474119 39215195 + 39215175 39215215 41 TGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGGCACG TGTGGGGCCCTGGATCCAAACCAAGATGGAGGTGAGGCACG < 41bp 1 0.347489454172836 1 0.714613795280457 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215195 chr19:39215193 synonymous SNV . 0 19 hm5C_associated_SNPs_13673 1 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39219780 39219780 1 + T C rs1136956 39219773 + 39219753 39219793 41 GACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAA GACCAGGTCATCGCTTCCTTCAAGGTCCTAGCAGGGGACAA < 41bp 1 0.693238972659302 1 0.870664358139038 experiment 0.613522054681396 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39219773 chr19:39219780 synonymous SNV . 0 28 hm5C_associated_SNPs_13674 1 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39219701-39219787
64251 chr19 39220563 39220563 1 + C G rs372527421 39220561 + 39220541 39220581 41 ACCCACCCAGCCCCTCTCCCCTCTCTGCTCCAGACTCACTT ACCCACCCAGCCCCTCTCCCCTGTCTGCTCCAGACTCACTT < 41bp 1 0.247237250012533 1 0.0542905032634735 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 UTR3 Human protein_coding chr19:39220561 chr19:39220563 . . 0 23 hm5C_associated_SNPs_13675 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39220540-39220606
64251 chr19 39390819 39390819 1 + C T rs140517797 39390816 + 39390796 39390836 41 CCGGGGCTGTCGTGGGCTCCCCTCGTCTTCGGCTACGTCAC CCGGGGCTGTCGTGGGCTCCCCTTGTCTTCGGCTACGTCAC < 41bp 1 0.146218483734671 1 0.0868688225746155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39390816 chr19:39390819 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_13676 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39390805-39390833
64251 chr19 39421388 39421388 1 - A G rs730078 39421381 - 39421361 39421401 41 AGTGCCGCCTTGTTCCCGGTCCAAGATGGCTGCGTCCATGG AGTGCCGCCTTGTCCCCGGTCCAAGATGGCTGCGTCCATGG < 41bp 1 0.209907462412733 1 0.275477707386017 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPS12;SARS2 ENSG00000104835;ENSG00000128626 UTR5 Human other chr19:39421381 chr19:39421388 . . 0 14 hm5C_associated_SNPs_13677 1 0 7 EIF3A POSTAR2 GSE65004,GSM1585666 chr19:39421361-39421389
64251 chr19 39421388 39421388 1 - A G rs730078 39421385 - 39421365 39421405 41 ACGAAGTGCCGCCTTGTTCCCGGTCCAAGATGGCTGCGTCC ACGAAGTGCCGCCTTGTCCCCGGTCCAAGATGGCTGCGTCC < 41bp 1 0.206476638760713 1 0.869350790977478 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPS12;SARS2 ENSG00000104835;ENSG00000128626 UTR5 Human other chr19:39421385 chr19:39421388 . . 0 18 hm5C_associated_SNPs_13678 1 0 7 EIF3A POSTAR2 GSE65004,GSM1585666 chr19:39421361-39421389
64251 chr19 39421820 39421820 1 + T G rs2304116 39421804 + 39421784 39421824 41 ATGAGGGCCTGTGGTTAGACCTATAGAGGTATTTCCTTTGA ATGAGGGCCTGTGGTTAGACCTATAGAGGTATTTCCGTTGA < 41bp 1 0.425382353524068 1 0.26369297504425 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS12 ENSG00000128626 UTR5 Human protein_coding chr19:39421804 chr19:39421820 . . 0 37 hm5C_associated_SNPs_13679 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39421819-39421847
64251 chr19 39860754 39860754 1 + A G rs139222739 39860763 + 39860743 39860783 41 TATTGGGAGCAATGCAAACACAGGTAAGTGGCGGGGGTGTC TATTGGGAGCAGTGCAAACACAGGTAAGTGGCGGGGGTGTC < 41bp 1 0.756915255712311 1 0.622675359249115 experiment 0.486169488575378 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860763 chr19:39860754 nonsynonymous SNV 0.941 0 12 hm5C_associated_SNPs_13698 0 0 7 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:39860723-39860755
64251 chr19 39889464 39889464 1 + G A rs112063338 39889467 + 39889447 39889487 41 CCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGG CCATGGTTCCCACATTCACACTCCATGGCCTCCTGTCCTGG < 41bp 1 0.767299484195261 1 0.886330604553223 experiment 0.465401031609479 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED29 ENSG00000063322 UTR3 Human protein_coding chr19:39889467 chr19:39889464 . . 0 18 hm5C_associated_SNPs_13699 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:39889436-39889467
64251 chr19 39915637 39915637 1 + G A rs31727 39915618 + 39915598 39915638 41 TGCCCTCTCCAGATACCTGGCAGCCTCATATATCAGCCAGA TGCCCTCTCCAGATACCTGGCAGCCTCATATATCAGCCAAA < 41bp 1 0.162404525105161 1 0.116248071193695 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915618 chr19:39915637 synonymous SNV . 0 40 hm5C_associated_SNPs_13700 0 0 1 EIF3H POSTAR2 ENCODE chr19:39915627-39915671
64251 chr19 39918384 39918384 1 + A G rs180825910 39918393 + 39918373 39918413 41 TCACTGTCCTCATTACATTCCTAATATGCAAGTGAGCATGT TCACTGTCCTCGTTACATTCCTAATATGCAAGTGAGCATGT < 41bp 1 0.125887805693118 1 0.0772877335548401 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHG2 ENSG00000269410 ncRNA_exonic Human other chr19:39918393 chr19:39918384 . . 0 12 hm5C_associated_SNPs_13701 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:39918378-39918400
64251 chr19 39948371 39948371 1 + C T rs199661076 39948360 + 39948340 39948380 41 GGACCAGTGGGAGGATGGAGCAGAGGACATTCTAGAGAAAG GGACCAGTGGGAGGATGGAGCAGAGGACATTTTAGAGAAAG < 41bp 1 0.613400336492619 1 0.765747547149658 experiment 0.773199327014762 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948360 chr19:39948371 synonymous SNV . 0 32 hm5C_associated_SNPs_13702 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948371 39948371 1 + C T rs199661076 39948367 + 39948347 39948387 41 TGGGAGGATGGAGCAGAGGACATTCTAGAGAAAGGTGTGTG TGGGAGGATGGAGCAGAGGACATTTTAGAGAAAGGTGTGTG < 41bp 1 0.0729502815806332 1 0.0435532629489899 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948367 chr19:39948371 synonymous SNV . 0 25 hm5C_associated_SNPs_13703 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39950209 39950209 1 + C T rs142546168 39950216 + 39950196 39950236 41 TAGGGATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTG TAGGGATCCCAATTTGTGGACTGTCAAATGTAAGGTATGTG < 41bp 1 0.0343661424903884 1 0.0726581811904907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950216 chr19:39950209 synonymous SNV . 0 14 hm5C_associated_SNPs_13704 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr19 39950209 39950209 1 + C T rs142546168 39950220 + 39950200 39950240 41 GATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTGCTCT GATCCCAATTTGTGGACTGTCAAATGTAAGGTATGTGCTCT < 41bp 1 0.404673715754206 1 0.821165025234222 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950220 chr19:39950209 synonymous SNV . 0 10 hm5C_associated_SNPs_13705 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr19 40719961 40719961 1 + A C rs538403826 40719959 + 40719939 40719979 41 CCCACGCCCTCGCCCAGCACCAACCCCCTGGTGGACCTGGA CCCACGCCCTCGCCCAGCACCACCCCCCTGGTGGACCTGGA < 41bp 1 0.151179234597034 1 0.0912465155124664 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40719959 chr19:40719961 nonsynonymous SNV 0.664 1 23 hm5C_associated_SNPs_13707 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:40719933-40719969
64251 chr19 41077996 41077996 1 + C G rs75257211 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GGACTCCAAGGGCCCGGGATCCGGGAGCACACACGGTGGGG < 41bp 1 0.400788739539693 1 0.833225727081299 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41077996 nonsynonymous SNV 0.064 0 18 hm5C_associated_SNPs_13709 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr19 41082803 41082803 1 + G A rs577265984 41082785 + 41082765 41082805 41 ACCCGGAAGTGGGTGCGGGCCAGCCGGCTCGCCCGGGGGCC ACCCGGAAGTGGGTGCGGGCCAGCCGGCTCGCCCGGGGACC < 41bp 1 0.600257996132209 1 0.461624145507812 experiment 0.799484007735582 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SHKBP1 ENSG00000160410 UTR5 Human protein_coding chr19:41082785 chr19:41082803 . . 0 39 hm5C_associated_SNPs_13710 0 0 5 DDX3X POSTAR2 ENCODE chr19:41082775-41082859
64251 chr19 41120211 41120211 1 + C G rs200914063 41120209 + 41120189 41120229 41 CCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACG CCCACATCCGACCACCCGACCTGTCTCCTCAGACGTGGACG < 41bp 1 0.038913565838735 1 0.00983792543411255 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTBP4 ENSG00000090006 intronic Human protein_coding chr19:41120209 chr19:41120211 . . 0 23 hm5C_associated_SNPs_13713 1 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41120194-41120229
64251 chr19 41284171 41284171 1 + C G rs537459045 41284166 + 41284146 41284186 41 GGAGGCGGAAGTGGCGGTGCCGGGCCCGGGGAGTAGGAAGG GGAGGCGGAAGTGGCGGTGCCGGGCGCGGGGAGTAGGAAGG < 41bp 1 0.718773144868164 1 0.83471405506134 experiment 0.562453710263672 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB4B-EGLN2 ENSG00000167578 UTR5 Human protein_coding chr19:41284166 chr19:41284171 . . 0 26 hm5C_associated_SNPs_13714 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:41284156-41284206
64251 chr19 41306519 41306519 1 + C A rs539658301 41306503 + 41306483 41306523 41 CAGCCCGTGCCAGCCGCAGCCCCTAAGTCAGGCTCTCCCTC CAGCCCGTGCCAGCCGCAGCCCCTAAGTCAGGCTCTACCTC < 41bp 1 0.303975126313356 1 0.182761073112488 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306503 chr19:41306519 synonymous SNV . 0 37 hm5C_associated_SNPs_13717 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:41306491-41306519
64251 chr19 41306555 41306555 1 + G C rs73047080 41306542 + 41306522 41306562 41 TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGGAGCCTGAGC TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGGACCCTGAGC < 41bp 1 0.625389840402043 1 0.953617334365845 experiment 0.749220319195914 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306542 chr19:41306555 nonsynonymous SNV 0.976 1 34 hm5C_associated_SNPs_13718 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41306540-41306569
64251 chr19 41770568 41770568 1 + C A rs201686804 41770577 + 41770557 41770597 41 CCGACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAG CCGACGACGAAACGGGGCGACCCGGGCACATCAACGAGGAG < 41bp 1 0.425175064451257 1 0.223275274038315 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770577 chr19:41770568 nonsynonymous SNV 0.327 0 12 hm5C_associated_SNPs_13741 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr19 41770568 41770568 1 + C A rs201686804 41770578 + 41770558 41770598 41 CGACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAGG CGACGACGAAACGGGGCGACCCGGGCACATCAACGAGGAGG < 41bp 1 0.642256878348049 1 0.575023174285889 experiment 0.715486243303901 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770578 chr19:41770568 nonsynonymous SNV 0.327 0 11 hm5C_associated_SNPs_13742 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr19 41770568 41770568 1 + C A rs201686804 41770579 + 41770559 41770599 41 GACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAGGT GACGACGAAACGGGGCGACCCGGGCACATCAACGAGGAGGT < 41bp 1 0.684030545237365 1 0.601768493652344 experiment 0.631938909525271 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770579 chr19:41770568 nonsynonymous SNV 0.327 0 10 hm5C_associated_SNPs_13743 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr19 41812506 41812506 1 + G A rs200198044 41812499 + 41812479 41812519 41 ACCCAGAGGCTCCCGGAGGCCCCTGCCGGCTTCCTCCACCA ACCCAGAGGCTCCCGGAGGCCCCTGCCAGCTTCCTCCACCA < 41bp 1 0.503375732264185 1 0.0974943041801453 experiment 0.993248535471631 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 UTR3 Human protein_coding chr19:41812499 chr19:41812506 . . 0 28 hm5C_associated_SNPs_13744 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:41812465-41812508
64251 chr19 41812506 41812506 1 + G A rs200198044 41812500 + 41812480 41812520 41 CCCAGAGGCTCCCGGAGGCCCCTGCCGGCTTCCTCCACCAG CCCAGAGGCTCCCGGAGGCCCCTGCCAGCTTCCTCCACCAG < 41bp 1 0.265996225995416 1 0.0666359961032867 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 UTR3 Human protein_coding chr19:41812500 chr19:41812506 . . 0 27 hm5C_associated_SNPs_13745 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:41812465-41812508
64251 chr19 42364904 42364904 1 + C G rs149249194 42364907 + 42364887 42364927 41 GTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTGAGTTTGGGG GTCAGAGCTCTGGCAGCGTTCCTCAAAAAGTGAGTTTGGGG < 41bp 1 0.216981565478202 1 0.522862672805786 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42364907 chr19:42364904 synonymous SNV . 0 18 hm5C_associated_SNPs_13746 1 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:42364843-42364909
64251 chr19 42580325 42580325 1 + A C rs187894637 42580336 + 42580316 42580356 41 GCGAGAGCGAGGCTACGGAGCAGGCGAGAGGCGACGGCGAG GCGAGAGCGCGGCTACGGAGCAGGCGAGAGGCGACGGCGAG < 41bp 1 0.749520536892435 1 0.855537354946136 experiment 0.50095892621513 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF574 ENSG00000105732 UTR5 Human protein_coding chr19:42580336 chr19:42580325 . . 0 10 hm5C_associated_SNPs_13747 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:42580320-42580360
64251 chr19 42580354 42580354 1 + G C rs529803887 42580336 + 42580316 42580356 41 GCGAGAGCGAGGCTACGGAGCAGGCGAGAGGCGACGGCGAG GCGAGAGCGAGGCTACGGAGCAGGCGAGAGGCGACGGCCAG < 41bp 1 0.767717734704187 1 0.858383774757385 experiment 0.464564530591625 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF574 ENSG00000105732 UTR5 Human protein_coding chr19:42580336 chr19:42580354 . . 0 39 hm5C_associated_SNPs_13748 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:42580320-42580360
64251 chr19 42881100 42881100 1 + C T rs76737545 42881092 + 42881072 42881112 41 CTTTGTTCTGCATTCAGCAGCTATTTATCGAGTACCTACTC CTTTGTTCTGCATTCAGCAGCTATTTATTGAGTACCTACTC < 41bp 1 0.0336127017780713 1 0.0911678075790405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MEGF8 ENSG00000105429 UTR3 Human protein_coding chr19:42881092 chr19:42881100 . . 0 29 hm5C_associated_SNPs_13753 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr19:42881077-42881101
64251 chr19 44342035 44342035 1 + T C rs77524195 44342047 + 44342027 44342067 41 GAGTAGAGTTATTAAAGGAACATGTACTAAGAAATTAGGCC GAGTAGAGCTATTAAAGGAACATGTACTAAGAAATTAGGCC < 41bp 1 0.109752196054511 1 0.295522093772888 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF283 ENSG00000167637 UTR3 Human protein_coding chr19:44342047 chr19:44342035 . . 0 9 hm5C_associated_SNPs_13764 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:44341998-44342048
64251 chr19 44732658 44732658 1 + C G rs922063 44732653 + 44732633 44732673 41 TCTCCAGGGAGGAACTGCGACTGCTCGATCTTACCCAGAGG TCTCCAGGGAGGAACTGCGACTGCTGGATCTTACCCAGAGG < 41bp 1 0.7449277885776 1 0.371895790100098 experiment 0.5101444228448 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44732653 chr19:44732658 nonsynonymous SNV 0.341 0 26 hm5C_associated_SNPs_13767 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr19:44732614-44732659
64251 chr19 45389198 45389198 1 + G C rs1966960 45389205 + 45389185 45389225 41 ACCCCACAGCCTGGAGGGACCTCCCTCCTACAAGCCACCAA ACCCCACAGCCTGCAGGGACCTCCCTCCTACAAGCCACCAA < 41bp 1 0.360623343903622 1 0.0504463315010071 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45389205 chr19:45389198 nonsynonymous SNV 0.748 4 14 hm5C_associated_SNPs_13768 0 0 1 RPS3 POSTAR2 ENCODE chr19:45389194-45389203
64251 chr19 45490636 45490636 1 + T C rs204468 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG CGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG < 41bp 1 0.682694792493523 1 0.795100688934326 experiment 0.634610415012954 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490636 synonymous SNV . 0 1 hm5C_associated_SNPs_13773 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:45490606-45490642
64251 chr19 45490643 45490643 1 + T C rs143527825 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATGAGCTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG < 41bp 1 0.657301353315198 1 0.724099576473236 experiment 0.685397293369604 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490643 synonymous SNV . 0 8 hm5C_associated_SNPs_13774 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:45490626-45490668
64251 chr19 45493771 45493771 1 + C T rs144674984 45493756 + 45493736 45493776 41 GTCCTCCTCTACATCCTGGACAACGAGACCAACTTCGTGGT GTCCTCCTCTACATCCTGGACAACGAGACCAACTTTGTGGT < 41bp 1 0.404382346587916 1 0.0763591527938843 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493756 chr19:45493771 synonymous SNV . 0 36 hm5C_associated_SNPs_13775 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:45493760-45493780
64251 chr19 45493771 45493771 1 + C T rs144674984 45493765 + 45493745 45493785 41 TACATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAG TACATCCTGGACAACGAGACCAACTTTGTGGTCCAGGTCAG < 41bp 1 0.428507231471487 1 0.102841019630432 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493765 chr19:45493771 synonymous SNV . 0 27 hm5C_associated_SNPs_13776 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:45493760-45493780
64251 chr19 45567717 45567717 1 + G C rs571145118 45567724 + 45567704 45567744 41 TACCGTTCCGGCCGCCACGCCCGCTCCCGGTCCCGCTCCTG TACCGTTCCGGCCCCCACGCCCGCTCCCGGTCCCGCTCCTG < 41bp 1 0.224775518297122 1 0.103388726711273 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567724 chr19:45567717 nonsynonymous SNV 0.232 1 14 hm5C_associated_SNPs_13777 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:45567716-45567772
64251 chr19 45648503 45648503 1 + A G rs10419874 45648504 + 45648484 45648524 41 GCCTGGACCTCGACCGTGAACCCAAGAAAGAGGCGGTGAGC GCCTGGACCTCGACCGTGAGCCCAAGAAAGAGGCGGTGAGC < 41bp 1 0.419277180325894 1 0.135405689477921 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R37 ENSG00000104866 CDS Human protein_coding chr19:45648504 chr19:45648503 synonymous SNV . 0 20 hm5C_associated_SNPs_13778 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:45648471-45648506
64251 chr19 45650431 45650431 1 + T G rs544076550 45650439 + 45650419 45650459 41 GCACTACAGCCCTTTGGGGGCGAGTGGCATGGGTGTGGGTG GCACTACAGCCCGTTGGGGGCGAGTGGCATGGGTGTGGGTG < 41bp 1 0.544524509160364 1 0.67010509967804 experiment 0.910950981679272 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650439 chr19:45650431 . . 0 13 hm5C_associated_SNPs_13779 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45650427-45650449
64251 chr19 45650434 45650434 1 + G A rs189379410 45650439 + 45650419 45650459 41 GCACTACAGCCCTTTGGGGGCGAGTGGCATGGGTGTGGGTG GCACTACAGCCCTTTAGGGGCGAGTGGCATGGGTGTGGGTG < 41bp 1 0.480229304508293 1 0.526834845542908 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650439 chr19:45650434 . . 0 16 hm5C_associated_SNPs_13780 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45650427-45650449
64251 chr19 45762333 45762333 1 + C T rs570301106 45762352 + 45762332 45762372 41 TCGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAACTAC TTGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAACTAC < 41bp 1 0.189384719177796 1 0.606874942779541 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45762352 chr19:45762333 synonymous SNV . 0 2 hm5C_associated_SNPs_13781 0 0 1 DDX3X POSTAR2 ENCODE chr19:45762247-45762369
64251 chr19 45762360 45762360 1 + C T rs141868124 45762352 + 45762332 45762372 41 TCGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAACTAC TCGCCTCCTGTCCCGAGGAGCAGCCCCATGTGGGCAACTAC < 41bp 1 0.190356146016855 1 0.385731220245361 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45762352 chr19:45762360 synonymous SNV . 0 29 hm5C_associated_SNPs_13782 0 0 1 DDX3X POSTAR2 ENCODE chr19:45762247-45762369
64251 chr19 45912890 45912890 1 - C T rs189503912 45912884 - 45912864 45912904 41 TGTAATAATAAATCGTCCTCCCAGGCCAGGCTCCTGCTGGC TGTAATAATAAATCATCCTCCCAGGCCAGGCTCCTGCTGGC < 41bp 1 0.422564886759865 1 0.421060264110565 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CD3EAP;ERCC1 ENSG00000012061;ENSG00000117877 UTR3 Human other chr19:45912884 chr19:45912890 . . 0 15 hm5C_associated_SNPs_13783 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:45912880-45912900
64251 chr19 45912890 45912890 1 - C T rs189503912 45912885 - 45912865 45912905 41 GTGTAATAATAAATCGTCCTCCCAGGCCAGGCTCCTGCTGG GTGTAATAATAAATCATCCTCCCAGGCCAGGCTCCTGCTGG < 41bp 1 0.338185706299491 1 0.40761661529541 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD3EAP;ERCC1 ENSG00000012061;ENSG00000117877 UTR3 Human other chr19:45912885 chr19:45912890 . . 0 16 hm5C_associated_SNPs_13784 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:45912880-45912900
64251 chr19 45912890 45912890 1 - C T rs189503912 45912887 - 45912867 45912907 41 CAGTGTAATAATAAATCGTCCTCCCAGGCCAGGCTCCTGCT CAGTGTAATAATAAATCATCCTCCCAGGCCAGGCTCCTGCT < 41bp 1 0.286712385509333 1 0.229839503765106 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD3EAP;ERCC1 ENSG00000012061;ENSG00000117877 UTR3 Human other chr19:45912887 chr19:45912890 . . 0 18 hm5C_associated_SNPs_13785 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:45912880-45912900
64251 chr19 46025469 46025469 1 + A C rs139701485 46025465 + 46025445 46025485 41 GAGCACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCA GAGCACATAGAGCGCCGGGTCTCCCATGCAGGTGATGCTCA < 41bp 1 0.338828468060719 1 0.10065883398056 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025465 chr19:46025469 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_13787 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025469 46025469 1 + A C rs139701485 46025467 + 46025447 46025487 41 GCACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGA GCACATAGAGCGCCGGGTCTCCCATGCAGGTGATGCTCAGA < 41bp 1 0.264647611222312 1 0.122413992881775 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025467 chr19:46025469 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_13788 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025469 46025469 1 + A C rs139701485 46025468 + 46025448 46025488 41 CACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGAT CACATAGAGCGCCGGGTCTCCCATGCAGGTGATGCTCAGAT < 41bp 1 0.12707309797753 1 0.0874674320220947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025468 chr19:46025469 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_13789 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025752 46025752 1 + G A rs200872555 46025759 + 46025739 46025779 41 CACCCCCTCTCCCGGCAGCACAGGGCCCTGGTGGTGGGGGA CACCCCCTCTCCCAGCAGCACAGGGCCCTGGTGGTGGGGGA < 41bp 1 0.743560221139691 1 0.605915307998657 experiment 0.512879557720618 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025759 chr19:46025752 synonymous SNV . 0 14 hm5C_associated_SNPs_13790 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:46025745-46025811
64251 chr19 46026006 46026006 1 + C T rs201980485 46026007 + 46025987 46026027 41 CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAA CTCAGGGGGGCCCACAGCCTCCAAAGCTGAGAGTGGTCGAA < 41bp 1 0.44495930249059 1 0.257960617542267 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026007 chr19:46026006 nonsynonymous SNV 0.119 0 20 hm5C_associated_SNPs_13791 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:46026006-46026007
64251 chr19 46026006 46026006 1 + C T rs201980485 46026008 + 46025988 46026028 41 TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAG TCAGGGGGGCCCACAGCCTCCAAAGCTGAGAGTGGTCGAAG < 41bp 1 0.507274157826451 1 0.498609215021133 experiment 0.985451684347098 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026008 chr19:46026006 nonsynonymous SNV 0.119 0 19 hm5C_associated_SNPs_13792 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:46026006-46026007
64251 chr19 46196111 46196111 1 + C T rs369185766 46196120 + 46196100 46196140 41 GCGTTCTACACCATTTGGAGCGGCTGGCACCGCAGGACTGA GCGTTCTACACTATTTGGAGCGGCTGGCACCGCAGGACTGA < 41bp 1 0.46676434738307 1 0.179182380437851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46196120 chr19:46196111 synonymous SNV . 0 12 hm5C_associated_SNPs_13793 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:46196093-46196116
64251 chr19 46206866 46206866 1 + T C rs113574860 46206872 + 46206852 46206892 41 GCTGGGATTACAGGTGTGAGCCACCGCACCTGGCAAAATGC GCTGGGATTACAGGCGTGAGCCACCGCACCTGGCAAAATGC < 41bp 1 0.267274088068274 1 0.081674188375473 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control QPCTL ENSG00000011478 UTR3 Human protein_coding chr19:46206872 chr19:46206866 . . 0 15 hm5C_associated_SNPs_13794 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:46206860-46206880
64251 chr19 46206866 46206866 1 + T C rs113574860 46206873 + 46206853 46206893 41 CTGGGATTACAGGTGTGAGCCACCGCACCTGGCAAAATGCT CTGGGATTACAGGCGTGAGCCACCGCACCTGGCAAAATGCT < 41bp 1 0.438790159778889 1 0.648126363754272 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control QPCTL ENSG00000011478 UTR3 Human protein_coding chr19:46206873 chr19:46206866 . . 0 14 hm5C_associated_SNPs_13795 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:46206860-46206880
64251 chr19 46206866 46206866 1 + T C rs113574860 46206875 + 46206855 46206895 41 GGGATTACAGGTGTGAGCCACCGCACCTGGCAAAATGCTGT GGGATTACAGGCGTGAGCCACCGCACCTGGCAAAATGCTGT < 41bp 1 0.398236180018253 1 0.540502786636353 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient QPCTL ENSG00000011478 UTR3 Human protein_coding chr19:46206875 chr19:46206866 . . 0 12 hm5C_associated_SNPs_13796 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:46206860-46206880
64251 chr19 46206866 46206866 1 + T C rs113574860 46206876 + 46206856 46206896 41 GGATTACAGGTGTGAGCCACCGCACCTGGCAAAATGCTGTT GGATTACAGGCGTGAGCCACCGCACCTGGCAAAATGCTGTT < 41bp 1 0.374337934890024 1 0.556848227977753 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient QPCTL ENSG00000011478 UTR3 Human protein_coding chr19:46206876 chr19:46206866 . . 0 11 hm5C_associated_SNPs_13797 0 0 2 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:46206860-46206880
64251 chr19 46878989 46878989 1 + G A rs4239538 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGCGACGAGCACAAGCGCTCCGTGGTGGACTCACTGGACAT < 41bp 1 0.522250560055711 1 0.454613119363785 experiment 0.955498879888578 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878989 synonymous SNV . 0 33 hm5C_associated_SNPs_13804 0 0 3 GRWD1 POSTAR2 ENCODE chr19:46878904-46879006
64251 chr19 46893665 46893665 1 + G A rs141163309 46893660 + 46893640 46893680 41 CCAATCCCACCGGACCCAGGCCCTGGGCTAGGGGCAGAGCA CCAATCCCACCGGACCCAGGCCCTGAGCTAGGGGCAGAGCA < 41bp 1 0.18775467621504 1 0.0690129101276398 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PPP5C ENSG00000011485 UTR3 Human protein_coding chr19:46893660 chr19:46893665 . . 0 26 hm5C_associated_SNPs_13806 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:46893640-46893670
64251 chr19 46893665 46893665 1 + G A rs141163309 46893674 + 46893654 46893694 41 CCCAGGCCCTGGGCTAGGGGCAGAGCAGGCCCCGCCCCAGG CCCAGGCCCTGAGCTAGGGGCAGAGCAGGCCCCGCCCCAGG < 41bp 1 0.780556490167517 1 0.624574422836304 experiment 0.438887019664967 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PPP5C ENSG00000011485 UTR3 Human protein_coding chr19:46893674 chr19:46893665 . . 0 12 hm5C_associated_SNPs_13807 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:46893640-46893670
64251 chr19 46893665 46893665 1 + G A rs141163309 46893683 + 46893663 46893703 41 TGGGCTAGGGGCAGAGCAGGCCCCGCCCCAGGGCAATGTTG TGAGCTAGGGGCAGAGCAGGCCCCGCCCCAGGGCAATGTTG < 41bp 1 0.355245956547304 1 0.122501373291016 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control PPP5C ENSG00000011485 UTR3 Human protein_coding chr19:46893683 chr19:46893665 . . 0 3 hm5C_associated_SNPs_13808 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:46893640-46893670
64251 chr19 47111761 47111761 1 + G A rs34089805 47111772 + 47111752 47111792 41 TGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGA TGACTTCCCAGAGTTCCTGACCATGATGGCCAGAAAGATGA < 41bp 1 0.0744979886142824 1 0.0297550857067108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111772 chr19:47111761 synonymous SNV . 0 10 hm5C_associated_SNPs_13809 2 0 29 FUS POSTAR2 DRA001158,DRS012384 chr19:47111740-47111763
64251 chr19 47112492 47112492 1 + C T rs370746699 47112482 + 47112462 47112502 41 CGCGCGCACTCTCTCTTCAACACTCCCCTGCGTACCCCGGT CGCGCGCACTCTCTCTTCAACACTCCCCTGTGTACCCCGGT < 41bp 1 0.0930823020370131 1 0.069995254278183 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CALM3 ENSG00000160014 UTR3 Human protein_coding chr19:47112482 chr19:47112492 . . 0 31 hm5C_associated_SNPs_13810 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:47112383-47112549
64251 chr19 47112838 47112838 1 + C T rs3729764 47112835 + 47112815 47112855 41 TGCTGGGAGGGACAAGAGGCCCTCCCCCAGGCAGAAGAGCA TGCTGGGAGGGACAAGAGGCCCTTCCCCAGGCAGAAGAGCA < 41bp 1 0.0279251262728844 1 0.0789730548858643 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CALM3 ENSG00000269292 ncRNA_intronic Human antisense chr19:47112835 chr19:47112838 . . 0 24 hm5C_associated_SNPs_13811 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:47112833-47112888
64251 chr19 47506841 47506841 1 + C T rs553539748 47506821 + 47506801 47506841 41 TTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGC TTGTGTCGCATACTGGGTGTCACGGCACACATTTACTCTGT < 41bp 1 0.770250270853793 1 0.405643999576569 experiment 0.459499458292413 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506821 chr19:47506841 . . 0 41 hm5C_associated_SNPs_13812 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:47506816-47506848
64251 chr19 47506841 47506841 1 + C T rs553539748 47506857 + 47506837 47506877 41 TCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGG TCTGTATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGG < 41bp 1 0.138766426238965 1 0.165836691856384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506857 chr19:47506841 . . 0 5 hm5C_associated_SNPs_13813 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:47506816-47506848
64251 chr19 47506851 47506851 1 + G A rs76436557 47506857 + 47506837 47506877 41 TCTGCATTGTCCCCGTCTTTCCCATCGCCTAGCGTTTGGGG TCTGCATTGTCCCCATCTTTCCCATCGCCTAGCGTTTGGGG < 41bp 1 0.146032585787826 1 0.0995436310768127 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506857 chr19:47506851 . . 0 15 hm5C_associated_SNPs_13814 0 0 1 YBX3 POSTAR2 ENCODE chr19:47506832-47506883
64251 chr19 47700611 47700611 1 + C T rs11083864 47700626 + 47700606 47700646 41 CCTGACCTGCTTCCTGAGGACTTTGTCAGGTTGGTGTCAGT CCTGATCTGCTTCCTGAGGACTTTGTCAGGTTGGTGTCAGT < 41bp 1 0.0773246146428844 1 0.0481594204902649 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SAE1 ENSG00000142230 CDS Human protein_coding chr19:47700626 chr19:47700611 synonymous SNV . 0 6 hm5C_associated_SNPs_13815 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47700503-47700636
64251 chr19 47700631 47700631 1 + T C rs77274475 47700626 + 47700606 47700646 41 CCTGACCTGCTTCCTGAGGACTTTGTCAGGTTGGTGTCAGT CCTGACCTGCTTCCTGAGGACTTTGCCAGGTTGGTGTCAGT < 41bp 1 0.057515304213242 1 0.0628405213356018 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SAE1 ENSG00000142230 CDS Human protein_coding chr19:47700626 chr19:47700631 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_13816 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47700503-47700636
64251 chr19 47763881 47763881 1 + A C rs551520953 47763890 + 47763870 47763910 41 GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGG GGTCTCCTGGGCCCCCTCGGCCCCCAGGGGCCAGCAAGGGG < 41bp 1 0.223686853008941 1 0.177614152431488 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763890 chr19:47763881 nonsynonymous SNV 0.994 0 12 hm5C_associated_SNPs_13817 0 0 7 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763881 47763881 1 + A C rs551520953 47763891 + 47763871 47763911 41 GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGG GTCTCCTGGGCCCCCTCGGCCCCCAGGGGCCAGCAAGGGGG < 41bp 1 0.680869178136839 1 0.51929122209549 experiment 0.638261643726321 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763891 chr19:47763881 nonsynonymous SNV 0.994 0 11 hm5C_associated_SNPs_13818 0 0 7 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763881 47763881 1 + A C rs551520953 47763892 + 47763872 47763912 41 TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG TCTCCTGGGCCCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG < 41bp 1 0.40128295926522 1 0.237205773591995 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763892 chr19:47763881 nonsynonymous SNV 0.994 0 10 hm5C_associated_SNPs_13819 0 0 7 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763881 47763881 1 + A C rs551520953 47763893 + 47763873 47763913 41 CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC CTCCTGGGCCCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC < 41bp 1 0.561103953530021 1 0.75317108631134 experiment 0.877792092939959 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763893 chr19:47763881 nonsynonymous SNV 0.994 0 9 hm5C_associated_SNPs_13820 0 0 7 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763888 47763888 1 + G A rs201968066 47763890 + 47763870 47763910 41 GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGG GGTCTCCTGGGACCCCTCAGCCCCCAGGGGCCAGCAAGGGG < 41bp 1 0.249490451403397 1 0.330574929714203 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763890 chr19:47763888 nonsynonymous SNV 0.976 2 19 hm5C_associated_SNPs_13821 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763888 47763888 1 + G A rs201968066 47763891 + 47763871 47763911 41 GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGG GTCTCCTGGGACCCCTCAGCCCCCAGGGGCCAGCAAGGGGG < 41bp 1 0.755191039252108 1 0.716943979263306 experiment 0.489617921495784 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763891 chr19:47763888 nonsynonymous SNV 0.976 2 18 hm5C_associated_SNPs_13822 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763888 47763888 1 + G A rs201968066 47763892 + 47763872 47763912 41 TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG TCTCCTGGGACCCCTCAGCCCCCAGGGGCCAGCAAGGGGGG < 41bp 1 0.407894712653187 1 0.525690078735352 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763892 chr19:47763888 nonsynonymous SNV 0.976 2 17 hm5C_associated_SNPs_13823 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763888 47763888 1 + G A rs201968066 47763893 + 47763873 47763913 41 CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC CTCCTGGGACCCCTCAGCCCCCAGGGGCCAGCAAGGGGGGC < 41bp 1 0.532931374100649 1 0.733106791973114 experiment 0.934137251798702 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763893 chr19:47763888 nonsynonymous SNV 0.976 2 16 hm5C_associated_SNPs_13824 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47778477 47778477 1 + G A rs531690454 47778486 + 47778466 47778506 41 TGGGAGTCCCCGGCGGGCCGCGACCCCAGCTCCAGCTGCCG TGGGAGTCCCCAGCGGGCCGCGACCCCAGCTCCAGCTGCCG < 41bp 1 0.299499888087308 1 0.0466729700565338 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INAFM1 ENSG00000257704 CDS Human protein_coding chr19:47778486 chr19:47778477 nonsynonymous SNV 0.112 1 12 hm5C_associated_SNPs_13825 0 0 5 AKAP8L POSTAR2 ENCODE chr19:47778476-47778486
64251 chr19 47876048 47876048 1 + C T rs562906654 47876028 + 47876008 47876048 41 CCATGTTCAGCCTGGTGGAGCCTGTGCTCACCATCGCAGCC CCATGTTCAGCCTGGTGGAGCCTGTGCTCACCATCGCAGCT < 41bp 1 0.0684701679539303 1 0.127856194972992 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX34 ENSG00000134815 CDS Human protein_coding chr19:47876028 chr19:47876048 synonymous SNV . 0 41 hm5C_associated_SNPs_13826 0 0 1 BUD13 POSTAR2 ENCODE chr19:47876023-47876057
64251 chr19 48244694 48244694 1 + G A rs543620769 48244691 + 48244671 48244711 41 CAAGGGCTCCGCCGAGTGAGCCGGCCCCCCTCCCATGGCCC CAAGGGCTCCGCCGAGTGAGCCGACCCCCCTCCCATGGCCC < 41bp 1 0.168347375209498 1 0.167461812496185 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EHD2 ENSG00000024422 UTR3 Human protein_coding chr19:48244691 chr19:48244694 . . 0 24 hm5C_associated_SNPs_13829 0 0 1 RPS3 POSTAR2 ENCODE chr19:48244685-48244727
64251 chr19 48244846 48244846 1 + G A rs547635108 48244847 + 48244827 48244867 41 GCCAGACACCCCGGTGGAAGCATTTAGAGGGGACCACGGGA GCCAGACACCCCGGTGGAAACATTTAGAGGGGACCACGGGA < 41bp 1 0.303066633394676 1 0.34847491979599 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EHD2 ENSG00000024422 UTR3 Human protein_coding chr19:48244847 chr19:48244846 . . 0 20 hm5C_associated_SNPs_13830 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:48244840-48244880
64251 chr19 48248807 48248807 1 + C T rs185060691 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCTTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG < 41bp 1 0.725550426808589 1 0.428969025611877 experiment 0.548899146382822 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 UTR5 Human protein_coding chr19:48248821 chr19:48248807 . . 0 7 hm5C_associated_SNPs_13832 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:48248800-48248820
64251 chr19 48248834 48248834 1 + T C rs10404034 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGCGGCGTTG < 41bp 1 0.760314101218869 1 0.452139854431152 experiment 0.479371797562262 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248834 synonymous SNV . 0 34 hm5C_associated_SNPs_13833 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr19 48259064 48259064 1 + G A rs563493472 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GAGCTCGGAGCTGACAGACTCACTCAGGACCCTGAAGGTGC < 41bp 1 0.212719097388243 1 0.0212992429733276 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259064 synonymous SNV . 0 22 hm5C_associated_SNPs_13834 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr19 48259147 48259147 1 + C G rs559576515 48259167 + 48259147 48259187 41 CCAGGGGCTATGGGCGACACCATGGCTGCCCCTGGGCTGGG GCAGGGGCTATGGGCGACACCATGGCTGCCCCTGGGCTGGG < 41bp 1 0.596183104382193 1 0.508589088916779 experiment 0.807633791235614 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SNORD23 ENSG00000221803 ncRNA_exonic Human snoRNA chr19:48259167 chr19:48259147 . . 0 1 hm5C_associated_SNPs_13835 0 0 13 FBL POSTAR2 GSE43666,GSM1067865 chr19:48259100-48259160
64251 chr19 48259200 48259200 1 + A G rs55813323 48259211 + 48259191 48259231 41 GTGGGGCCAATGCCCAGGGGCTGAGGGCACGGGATGCTGGG GTGGGGCCAGTGCCCAGGGGCTGAGGGCACGGGATGCTGGG < 41bp 1 0.340344396808744 1 0.443438917398453 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD23 ENSG00000221803 ncRNA_exonic Human snoRNA chr19:48259211 chr19:48259200 . . 0 10 hm5C_associated_SNPs_13836 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:48259196-48259219
64251 chr19 48259200 48259200 1 + A G rs55813323 48259218 + 48259198 48259238 41 CAATGCCCAGGGGCTGAGGGCACGGGATGCTGGGATGAGAT CAGTGCCCAGGGGCTGAGGGCACGGGATGCTGGGATGAGAT < 41bp 1 0.445405470826456 1 0.422926604747772 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD23 ENSG00000221803 ncRNA_exonic Human snoRNA chr19:48259218 chr19:48259200 . . 0 3 hm5C_associated_SNPs_13837 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:48259196-48259219
64251 chr19 48259206 48259206 1 + A G rs530473873 48259211 + 48259191 48259231 41 GTGGGGCCAATGCCCAGGGGCTGAGGGCACGGGATGCTGGG GTGGGGCCAATGCCCGGGGGCTGAGGGCACGGGATGCTGGG < 41bp 1 0.31960668291789 1 0.416885077953339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD23 ENSG00000221803 ncRNA_exonic Human snoRNA chr19:48259211 chr19:48259206 . . 0 16 hm5C_associated_SNPs_13838 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:48259196-48259219
64251 chr19 48259206 48259206 1 + A G rs530473873 48259218 + 48259198 48259238 41 CAATGCCCAGGGGCTGAGGGCACGGGATGCTGGGATGAGAT CAATGCCCGGGGGCTGAGGGCACGGGATGCTGGGATGAGAT < 41bp 1 0.499055209210208 1 0.5120490193367 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD23 ENSG00000221803 ncRNA_exonic Human snoRNA chr19:48259218 chr19:48259206 . . 0 9 hm5C_associated_SNPs_13839 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:48259196-48259219
64251 chr19 48259220 48259220 1 + C T rs8105677 48259211 + 48259191 48259231 41 GTGGGGCCAATGCCCAGGGGCTGAGGGCACGGGATGCTGGG GTGGGGCCAATGCCCAGGGGCTGAGGGCATGGGATGCTGGG < 41bp 1 0.265237073339913 1 0.353404939174652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 intronic Human protein_coding chr19:48259211 chr19:48259220 . . 0 30 hm5C_associated_SNPs_13840 0 0 13 FBL POSTAR2 GSE43666,GSM1067865 chr19:48259109-48259230
64251 chr19 48259220 48259220 1 + C T rs8105677 48259218 + 48259198 48259238 41 CAATGCCCAGGGGCTGAGGGCACGGGATGCTGGGATGAGAT CAATGCCCAGGGGCTGAGGGCATGGGATGCTGGGATGAGAT < 41bp 1 0.239801753729931 1 0.262952119112015 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 intronic Human protein_coding chr19:48259218 chr19:48259220 . . 0 23 hm5C_associated_SNPs_13841 0 0 13 FBL POSTAR2 GSE43666,GSM1067865 chr19:48259109-48259230
64251 chr19 48259787 48259787 1 + C G rs11538664 48259799 + 48259779 48259819 41 CTGTAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAG CTGTAGCCGGAGGGCAACATCCTTCGAGACCGGTTCAAGAG < 41bp 1 0.0678419994875078 1 0.230099499225616 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259799 chr19:48259787 synonymous SNV . 0 9 hm5C_associated_SNPs_13842 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48259748-48259796
64251 chr19 48259787 48259787 1 + C G rs11538664 48259803 + 48259783 48259823 41 AGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTC AGCCGGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTC < 41bp 1 0.76676780831659 1 0.874900877475739 experiment 0.466464383366821 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259803 chr19:48259787 synonymous SNV . 0 5 hm5C_associated_SNPs_13843 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48259748-48259796
64251 chr19 48832637 48832637 1 + G A rs535964111 48832653 + 48832633 48832673 41 TCATGGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTCATC TCATAGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTCATC < 41bp 1 0.476133587250931 1 0.0383817851543427 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832653 chr19:48832637 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_13849 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48832620-48832640
64251 chr19 48954421 48954421 1 + G A rs2302951 48954428 + 48954408 48954448 41 AGCTGGAGCCGCCGGGAGCCCTTCCTGCTCAGTGGCGGGGA AGCTGGAGCCGCCAGGAGCCCTTCCTGCTCAGTGGCGGGGA < 41bp 1 0.224060686669279 1 0.265490174293518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48954428 chr19:48954421 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_13850 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:48954404-48954429
64251 chr19 48957062 48957062 1 + G A rs569432524 48957057 + 48957037 48957077 41 ATTTCTCCGTGTGGGGGCTACATGCGACCCTCTCCCCTCCT ATTTCTCCGTGTGGGGGCTACATGCAACCCTCTCCCCTCCT < 41bp 1 0.31506969498998 1 0.147711634635925 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRWD1 ENSG00000105447 UTR3 Human protein_coding chr19:48957057 chr19:48957062 . . 0 26 hm5C_associated_SNPs_13851 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48957024-48957083
64251 chr19 48959021 48959021 1 + C T rs184790733 48959028 + 48959008 48959048 41 CCCCCTGGCACTGCGGGGGCCTGGCCAGCTCATGGCGTTCC CCCCCTGGCACTGTGGGGGCCTGGCCAGCTCATGGCGTTCC < 41bp 1 0.58691912368801 1 0.0665988028049469 experiment 0.82616175262398 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KCNJ14 ENSG00000182324;ENSG00000105447 UTR5;UTR3 Human other chr19:48959028 chr19:48959021 . . 0 14 hm5C_associated_SNPs_13852 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:48958926-48959022
64251 chr19 48959122 48959122 1 + A G rs188820581 48959121 + 48959101 48959141 41 TCCTGAGCGGCCAAGGTGAGCAGTGGGGTCTGAGAGTCCAG TCCTGAGCGGCCAAGGTGAGCGGTGGGGTCTGAGAGTCCAG < 41bp 1 0.730385913791334 1 0.41284242272377 experiment 0.539228172417332 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCNJ14 ENSG00000105447 UTR3 Human protein_coding chr19:48959121 chr19:48959122 . . 0 22 hm5C_associated_SNPs_13853 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48959089-48959168
64251 chr19 48972707 48972707 1 + G A rs546363096 48972687 + 48972667 48972707 41 GGGCGTTTGAGCGGGCTCACCCGAGCCCGCGGGCCAACGCG GGGCGTTTGAGCGGGCTCACCCGAGCCCGCGGGCCAACGCA < 41bp 1 0.688310048510558 1 0.703748345375061 experiment 0.623379902978884 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYTH2 ENSG00000268530 ncRNA_exonic Human antisense chr19:48972687 chr19:48972707 . . 0 41 hm5C_associated_SNPs_13854 0 0 3 NCBP2 POSTAR2 ENCODE chr19:48972595-48972721
64251 chr19 49468644 49468644 1 + C T rs11553228 49468653 + 49468633 49468673 41 TCTCTTCCAGCCTCCGACCGCCCTCCGATTTCCTCTCCGCT TCTCTTCCAGCTTCCGACCGCCCTCCGATTTCCTCTCCGCT < 41bp 1 0.0409399108863938 1 0.192855358123779 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FTL ENSG00000087086 UTR5 Human protein_coding chr19:49468653 chr19:49468644 . . 0 12 hm5C_associated_SNPs_13857 0 0 21 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:49468577-49468730
64251 chr19 49469087 49469087 1 + T C rs2230267 49469074 + 49469054 49469094 41 GCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCCGA GCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAACTGGCCGA < 41bp 1 0.44084256726328 1 0.0822116732597351 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469074 chr19:49469087 synonymous SNV . 0 34 hm5C_associated_SNPs_13858 5 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:49469031-49469120
64251 chr19 49470060 49470060 1 + T C rs569313546 49470063 + 49470043 49470083 41 GCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTT GCTTCTGCCTAAGCCTCCCCCTCCAGCCAATAGGCAGCTTT < 41bp 1 0.701747629549406 1 0.977875828742981 experiment 0.596504740901189 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FTL ENSG00000087086 UTR3 Human protein_coding chr19:49470063 chr19:49470060 . . 0 18 hm5C_associated_SNPs_13859 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:49470040-49470100
64251 chr19 49470064 49470064 1 + T C rs536646625 49470063 + 49470043 49470083 41 GCTTCTGCCTAAGCCTCTCCCTCCAGCCAATAGGCAGCTTT GCTTCTGCCTAAGCCTCTCCCCCCAGCCAATAGGCAGCTTT < 41bp 1 0.572414641133994 1 0.467041343450546 experiment 0.855170717732011 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FTL ENSG00000087086 UTR3 Human protein_coding chr19:49470063 chr19:49470064 . . 0 22 hm5C_associated_SNPs_13860 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:49470040-49470100
64251 chr19 49611724 49611724 1 + G A rs377192222 49611707 + 49611687 49611727 41 CTGCGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGT CTGCGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTATGT < 41bp 1 0.160377430857698 1 0.0247980058193207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 UTR3 Human protein_coding chr19:49611707 chr19:49611724 . . 0 38 hm5C_associated_SNPs_13862 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr19 49611724 49611724 1 + G A rs377192222 49611710 + 49611690 49611730 41 CGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGTTTG CGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTATGTTTG < 41bp 1 0.0489112506543927 1 0.0550951659679413 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 UTR3 Human protein_coding chr19:49611710 chr19:49611724 . . 0 35 hm5C_associated_SNPs_13863 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr19 49967981 49967981 1 + T A rs11558188 49967998 + 49967978 49968018 41 TGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA TGTACCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA < 41bp 1 0.532538956432851 1 0.533115386962891 experiment 0.934922087134298 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967998 chr19:49967981 synonymous SNV . 0 4 hm5C_associated_SNPs_13865 0 0 2 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49967996 49967996 1 + G A rs10421522 49967998 + 49967978 49968018 41 TGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA TGTTCCCTCAACCCTGCCAGCTGGGCCTGAAATAGGGCCCA < 41bp 1 0.619787959837226 1 0.629101276397705 experiment 0.760424080325547 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967998 chr19:49967996 synonymous SNV . 0 19 hm5C_associated_SNPs_13866 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49967996 49967996 1 + G A rs10421522 49968003 + 49967983 49968023 41 CCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGA CCTCAACCCTGCCAGCTGGGCCTGAAATAGGGCCCAGGTGA < 41bp 1 0.242568342009664 1 0.0903988182544708 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968003 chr19:49967996 synonymous SNV . 0 14 hm5C_associated_SNPs_13867 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49967996 49967996 1 + G A rs10421522 49968004 + 49967984 49968024 41 CTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGAG CTCAACCCTGCCAGCTGGGCCTGAAATAGGGCCCAGGTGAG < 41bp 1 0.455515691612196 1 0.343752026557922 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968004 chr19:49967996 synonymous SNV . 0 13 hm5C_associated_SNPs_13868 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49967996 49967996 1 + G A rs10421522 49968015 + 49967995 49968035 41 CGGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGC CAGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGC < 41bp 1 0.183093162617894 1 0.233989059925079 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968015 chr19:49967996 synonymous SNV . 0 2 hm5C_associated_SNPs_13869 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49967996 49967996 1 + G A rs10421522 49968016 + 49967996 49968036 41 GGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCC AGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCC < 41bp 1 0.246778840208469 1 0.467673629522324 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968016 chr19:49967996 synonymous SNV . 0 1 hm5C_associated_SNPs_13870 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49967998 + 49967978 49968018 41 TGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA TGTTCCCTCAACCCTGCCGGCTGGACCTGAAATAGGGCCCA < 41bp 1 0.663823487254806 1 0.735500633716583 experiment 0.672353025490387 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967998 chr19:49968002 synonymous SNV . 0 25 hm5C_associated_SNPs_13871 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49968003 + 49967983 49968023 41 CCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGA CCTCAACCCTGCCGGCTGGACCTGAAATAGGGCCCAGGTGA < 41bp 1 0.326437171541926 1 0.065927267074585 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968003 chr19:49968002 synonymous SNV . 0 20 hm5C_associated_SNPs_13872 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49968004 + 49967984 49968024 41 CTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGAG CTCAACCCTGCCGGCTGGACCTGAAATAGGGCCCAGGTGAG < 41bp 1 0.609863911616447 1 0.30119264125824 experiment 0.780272176767106 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968004 chr19:49968002 synonymous SNV . 0 19 hm5C_associated_SNPs_13873 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49968015 + 49967995 49968035 41 CGGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGC CGGCTGGACCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGC < 41bp 1 0.182306565051793 1 0.198590308427811 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968015 chr19:49968002 synonymous SNV . 0 8 hm5C_associated_SNPs_13874 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49968016 + 49967996 49968036 41 GGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCC GGCTGGACCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCC < 41bp 1 0.272424313902401 1 0.426885902881622 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968016 chr19:49968002 synonymous SNV . 0 7 hm5C_associated_SNPs_13875 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968002 49968002 1 + G A rs141388688 49968017 + 49967997 49968037 41 GCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCCA GCTGGACCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCCA < 41bp 1 0.679553503221047 1 0.837146401405334 experiment 0.640892993557906 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968017 chr19:49968002 synonymous SNV . 0 6 hm5C_associated_SNPs_13876 0 0 3 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49973615 49973615 1 + C T rs539672490 49973605 + 49973585 49973625 41 CCTCGGCAGGAAACCTCAAACCGGTGTGGGCGAGCAGGGGC CCTCGGCAGGAAACCTCAAACCGGTGTGGGTGAGCAGGGGC < 41bp 1 0.656548595229538 1 0.561713099479675 experiment 0.686902809540923 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49973605 chr19:49973615 nonsynonymous SNV 0.061 0 31 hm5C_associated_SNPs_13877 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:49973601-49973643
64251 chr19 49993254 49993254 1 + C G rs141468307 49993237 + 49993217 49993257 41 CGCTGGAGGTCAGTGATGAGCAACATTCACCATCTTTCGTT CGCTGGAGGTCAGTGATGAGCAACATTCACCATCTTTGGTT < 41bp 1 0.738169822454323 1 0.396925956010818 experiment 0.523660355091355 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993237 chr19:49993254 . . 0 38 hm5C_associated_SNPs_13881 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993240 + 49993220 49993260 41 TGGAGGTCAGTGATGAGCAACATTCACCATCTTTCGTTTGA TGGAGGTCAGTGATGAGCAACATTCACCATCTTTGGTTTGA < 41bp 1 0.0230534864380949 1 0.036264181137085 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993240 chr19:49993254 . . 0 35 hm5C_associated_SNPs_13882 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993244 + 49993224 49993264 41 GGTCAGTGATGAGCAACATTCACCATCTTTCGTTTGAGTCT GGTCAGTGATGAGCAACATTCACCATCTTTGGTTTGAGTCT < 41bp 1 0.748242979626246 1 0.789601445198059 experiment 0.503514040747507 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993244 chr19:49993254 . . 0 31 hm5C_associated_SNPs_13883 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993246 + 49993226 49993266 41 TCAGTGATGAGCAACATTCACCATCTTTCGTTTGAGTCTCA TCAGTGATGAGCAACATTCACCATCTTTGGTTTGAGTCTCA < 41bp 1 0.0705397614962717 1 0.278565526008606 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993246 chr19:49993254 . . 0 29 hm5C_associated_SNPs_13884 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993247 + 49993227 49993267 41 CAGTGATGAGCAACATTCACCATCTTTCGTTTGAGTCTCAC CAGTGATGAGCAACATTCACCATCTTTGGTTTGAGTCTCAC < 41bp 1 0.120944631106931 1 0.242182284593582 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993247 chr19:49993254 . . 0 28 hm5C_associated_SNPs_13885 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993250 + 49993230 49993270 41 TGATGAGCAACATTCACCATCTTTCGTTTGAGTCTCACGGC TGATGAGCAACATTCACCATCTTTGGTTTGAGTCTCACGGC < 41bp 1 0.180790513525124 1 0.0742266178131104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993250 chr19:49993254 . . 0 25 hm5C_associated_SNPs_13886 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49993254 49993254 1 + C G rs141468307 49993267 + 49993247 49993287 41 CATCTTTCGTTTGAGTCTCACGGCCATGAGATCAACCCCAT CATCTTTGGTTTGAGTCTCACGGCCATGAGATCAACCCCAT < 41bp 1 0.494894891195119 1 0.868574500083923 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993267 chr19:49993254 . . 0 8 hm5C_associated_SNPs_13887 0 0 81 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993225-49993255
64251 chr19 49994070 49994070 1 + C T rs11266873 49994055 + 49994035 49994075 41 GGTATGCTGCCCCACAAAACCAAGCGAGGCCAGGCCGCTCT GGTATGCTGCCCCACAAAACCAAGCGAGGCCAGGCTGCTCT < 41bp 1 0.739924510910526 1 0.513804495334625 experiment 0.520150978178947 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49994055 chr19:49994070 synonymous SNV . 0 36 hm5C_associated_SNPs_13888 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49994033-49994108
64251 chr19 49994439 49994439 1 + G T rs368173441 49994434 + 49994414 49994454 41 CCTGGGGACCTGGAGCCTGGCAGATGATGTCCTTATCTCAC CCTGGGGACCTGGAGCCTGGCAGATTATGTCCTTATCTCAC < 41bp 1 0.34263218930684 1 0.168412834405899 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994434 chr19:49994439 . . 0 26 hm5C_associated_SNPs_13889 0 0 80 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:49994420-49994440
64251 chr19 49994470 49994470 1 + T A rs59192944 49994464 + 49994444 49994484 41 CCTTATCTCACGATGGTCTGCGGATGTCCCTGTGGGAATGG CCTTATCTCACGATGGTCTGCGGATGACCCTGTGGGAATGG < 41bp 1 0.355932468637656 1 0.205608069896698 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994464 chr19:49994470 . . 0 27 hm5C_associated_SNPs_13890 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994470 49994470 1 + T A rs59192944 49994471 + 49994451 49994491 41 TCACGATGGTCTGCGGATGTCCCTGTGGGAATGGCGACAAT TCACGATGGTCTGCGGATGACCCTGTGGGAATGGCGACAAT < 41bp 1 0.220088038454619 1 0.265103548765182 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994471 chr19:49994470 . . 0 20 hm5C_associated_SNPs_13891 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994470 49994470 1 + T A rs59192944 49994473 + 49994453 49994493 41 ACGATGGTCTGCGGATGTCCCTGTGGGAATGGCGACAATGC ACGATGGTCTGCGGATGACCCTGTGGGAATGGCGACAATGC < 41bp 1 0.463379965743619 1 0.290252208709717 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994473 chr19:49994470 . . 0 18 hm5C_associated_SNPs_13892 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994470 49994470 1 + T A rs59192944 49994485 + 49994465 49994505 41 GGATGTCCCTGTGGGAATGGCGACAATGCCAATGGCTTAGC GGATGACCCTGTGGGAATGGCGACAATGCCAATGGCTTAGC < 41bp 1 0.662699195955565 1 0.258511334657669 experiment 0.67460160808887 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994485 chr19:49994470 . . 0 6 hm5C_associated_SNPs_13893 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994464 + 49994444 49994484 41 CCTTATCTCACGATGGTCTGCGGATGTCCCTGTGGGAATGG CCTTATCTCACGATGGTCTGCGGATGTCCCTGCGGGAATGG < 41bp 1 0.390777598792718 1 0.137813657522202 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994464 chr19:49994476 . . 0 33 hm5C_associated_SNPs_13894 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994471 + 49994451 49994491 41 TCACGATGGTCTGCGGATGTCCCTGTGGGAATGGCGACAAT TCACGATGGTCTGCGGATGTCCCTGCGGGAATGGCGACAAT < 41bp 1 0.204093753772996 1 0.213362872600555 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994471 chr19:49994476 . . 0 26 hm5C_associated_SNPs_13895 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994473 + 49994453 49994493 41 ACGATGGTCTGCGGATGTCCCTGTGGGAATGGCGACAATGC ACGATGGTCTGCGGATGTCCCTGCGGGAATGGCGACAATGC < 41bp 1 0.671787018000633 1 0.451991021633148 experiment 0.656425963998734 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994473 chr19:49994476 . . 0 24 hm5C_associated_SNPs_13896 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994485 + 49994465 49994505 41 GGATGTCCCTGTGGGAATGGCGACAATGCCAATGGCTTAGC GGATGTCCCTGCGGGAATGGCGACAATGCCAATGGCTTAGC < 41bp 1 0.676930244158952 1 0.320696026086807 experiment 0.646139511682097 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994485 chr19:49994476 . . 0 12 hm5C_associated_SNPs_13897 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994493 + 49994473 49994513 41 CTGTGGGAATGGCGACAATGCCAATGGCTTAGCTGATGCCA CTGCGGGAATGGCGACAATGCCAATGGCTTAGCTGATGCCA < 41bp 1 0.154594745534703 1 0.211076468229294 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994493 chr19:49994476 . . 0 4 hm5C_associated_SNPs_13898 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49994476 49994476 1 + T C rs56974957 49994494 + 49994474 49994514 41 TGTGGGAATGGCGACAATGCCAATGGCTTAGCTGATGCCAG TGCGGGAATGGCGACAATGCCAATGGCTTAGCTGATGCCAG < 41bp 1 0.358065726690849 1 0.640757262706757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD35A ENSG00000200259 ncRNA_exonic Human snoRNA chr19:49994494 chr19:49994476 . . 0 3 hm5C_associated_SNPs_13899 0 0 68 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:49994400-49994480
64251 chr19 49995120 49995120 1 + A G rs116432725 49995110 + 49995090 49995130 41 AATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCT AATTCCTCATGCGTTGCCTGCCCTTCCTCCGTTGTTGCCCT < 41bp 1 0.0730109042856586 1 0.0557745397090912 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995110 chr19:49995120 . . 0 31 hm5C_associated_SNPs_13900 0 0 72 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:49995059-49995130
64251 chr19 49995120 49995120 1 + A G rs116432725 49995112 + 49995092 49995132 41 TTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCTGG TTCCTCATGCGTTGCCTGCCCTTCCTCCGTTGTTGCCCTGG < 41bp 1 0.204673254000176 1 0.0401736795902252 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995112 chr19:49995120 . . 0 29 hm5C_associated_SNPs_13901 0 0 72 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:49995059-49995130
64251 chr19 49995420 49995420 1 + T C rs537341906 49995427 + 49995407 49995447 41 AATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGTA AATGTGCAAGCACCTGGGGACAGCATGAGCTTGCTGTTGTA < 41bp 1 0.784694496208891 1 0.426548600196838 experiment 0.430611007582218 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995427 chr19:49995420 . . 0 14 hm5C_associated_SNPs_13902 0 0 53 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 49995420 49995420 1 + T C rs537341906 49995436 + 49995416 49995456 41 GCACTTGGGGACAGCATGAGCTTGCTGTTGTACACAGGGTA GCACCTGGGGACAGCATGAGCTTGCTGTTGTACACAGGGTA < 41bp 1 0.409493001178776 1 0.147377192974091 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995436 chr19:49995420 . . 0 5 hm5C_associated_SNPs_13903 0 0 53 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 49995430 49995430 1 + C A rs8113219 49995427 + 49995407 49995447 41 AATGTGCAAGCACTTGGGGACAGCATGAGCTTGCTGTTGTA AATGTGCAAGCACTTGGGGACAGAATGAGCTTGCTGTTGTA < 41bp 1 0.727478705883331 1 0.421583980321884 experiment 0.545042588233338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995427 chr19:49995430 . . 0 24 hm5C_associated_SNPs_13904 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 49995430 49995430 1 + C A rs8113219 49995436 + 49995416 49995456 41 GCACTTGGGGACAGCATGAGCTTGCTGTTGTACACAGGGTA GCACTTGGGGACAGAATGAGCTTGCTGTTGTACACAGGGTA < 41bp 1 0.402202969261615 1 0.118008345365524 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995436 chr19:49995430 . . 0 15 hm5C_associated_SNPs_13905 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 49995430 49995430 1 + C A rs8113219 49995448 + 49995428 49995468 41 AGCATGAGCTTGCTGTTGTACACAGGGTATTTCTAGAAGCA AGAATGAGCTTGCTGTTGTACACAGGGTATTTCTAGAAGCA < 41bp 1 0.601757012667605 1 0.155122488737106 experiment 0.79648597466479 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995448 chr19:49995430 . . 0 3 hm5C_associated_SNPs_13906 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49995083-49995467
64251 chr19 49995512 49995512 1 + G A rs11539144 49995511 + 49995491 49995531 41 AACCAAGGGGTTACAGGCATCGCCCATGCTCCTCACCTGTA AACCAAGGGGTTACAGGCATCACCCATGCTCCTCACCTGTA < 41bp 1 0.584904170111133 1 0.151925593614578 experiment 0.830191659777733 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995511 chr19:49995512 . . 0 22 hm5C_associated_SNPs_13907 0 0 38 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49995335-49995547
64251 chr19 49995522 49995522 1 + C T rs3203517 49995511 + 49995491 49995531 41 AACCAAGGGGTTACAGGCATCGCCCATGCTCCTCACCTGTA AACCAAGGGGTTACAGGCATCGCCCATGCTCTTCACCTGTA < 41bp 1 0.63487233433728 1 0.351213574409485 experiment 0.730255331325439 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL13A ENSG00000142541 UTR3 Human protein_coding chr19:49995511 chr19:49995522 . . 0 32 hm5C_associated_SNPs_13908 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49995335-49995547
64251 chr19 50099257 50099257 1 + C T rs199894425 50099242 + 50099222 50099262 41 CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCGG CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGTGGCGG < 41bp 1 0.580881404781078 1 0.614426672458649 experiment 0.838237190437843 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099242 chr19:50099257 synonymous SNV . 0 36 hm5C_associated_SNPs_13909 0 0 3 BUD13 POSTAR2 ENCODE chr19:50099216-50099280
64251 chr19 50183502 50183502 1 + G A rs138647163 50183506 + 50183486 50183526 41 TGGAGAGATGGTAGGCGTGGCTGAGGTATCGGGGTGCTCCC TGGAGAGATGGTAGGCATGGCTGAGGTATCGGGGTGCTCCC < 41bp 1 0.793216151826631 1 0.20240730047226 experiment 0.413567696346739 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50183506 chr19:50183502 nonsynonymous SNV 0.992 0 17 hm5C_associated_SNPs_13912 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:50183477-50183512
64251 chr19 50192822 50192822 1 + G A rs189326953 50192806 + 50192786 50192826 41 ACGCTTTGAAGGGGGCGAGTCTCCACAGACCTCCTAGGGGG ACGCTTTGAAGGGGGCGAGTCTCCACAGACCTCCTAAGGGG < 41bp 1 0.60131296482743 1 0.957873940467834 experiment 0.79737407034514 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADM5 ENSG00000268677 ncRNA_intronic Human antisense chr19:50192806 chr19:50192822 . . 0 37 hm5C_associated_SNPs_13913 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:50192819-50192849
64251 chr19 50321587 50321587 1 + A G rs114843375 50321567 + 50321547 50321587 41 TTCCGCGGCGTCGGCTGCGGCTGCAGTGGTGGTGGCGGGTA TTCCGCGGCGTCGGCTGCGGCTGCAGTGGTGGTGGCGGGTG < 41bp 1 0.784125597129044 1 0.776008248329163 experiment 0.431748805741912 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MED25 ENSG00000104973 UTR5 Human protein_coding chr19:50321567 chr19:50321587 . . 0 41 hm5C_associated_SNPs_13923 1 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50321566-50321590
64251 chr19 50333114 50333114 1 + C A rs149788020 50333110 + 50333090 50333130 41 TCGGCTTCTGTTTGAGAAGGCAGCCCCCCCGGCCTTGCTGG TCGGCTTCTGTTTGAGAAGGCAGCACCCCCGGCCTTGCTGG < 41bp 1 0.575377801472489 1 0.294903010129929 experiment 0.849244397055021 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50333110 chr19:50333114 synonymous SNV . 0 25 hm5C_associated_SNPs_13924 2 0 2 DDX24 POSTAR2 ENCODE chr19:50333089-50333200
64251 chr19 50385611 50385611 1 + C G rs146013154 50385593 + 50385573 50385613 41 GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGC GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCGGC < 41bp 1 0.273271878416691 1 0.169112622737885 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385593 chr19:50385611 nonsynonymous SNV 0.087 0 39 hm5C_associated_SNPs_13925 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50385611 50385611 1 + C G rs146013154 50385594 + 50385574 50385614 41 CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCGGCC < 41bp 1 0.525805673712302 1 0.281597644090652 experiment 0.948388652575395 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385594 chr19:50385611 nonsynonymous SNV 0.087 0 38 hm5C_associated_SNPs_13926 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50432427 50432427 1 - A G rs1152232 50432420 - 50432400 50432440 41 GACAGATATATACTGGGTGGCGGAGCACGGCCCTCCCGGAT GACAGATATATACCGGGTGGCGGAGCACGGCCCTCCCGGAT < 41bp 1 0.579532788651779 1 0.902491688728333 experiment 0.840934422696442 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF5 ENSG00000169136;ENSG00000213024 UTR5 Human other chr19:50432420 chr19:50432427 . . 0 14 hm5C_associated_SNPs_13927 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:50432424-50432445
64251 chr19 50713632 50713632 1 + G A rs532458856 50713649 + 50713629 50713669 41 GCCGTGACCATGTCGGTGCCCGGGCGGAAGGCGCCCCCCAG GCCATGACCATGTCGGTGCCCGGGCGGAAGGCGCCCCCCAG < 41bp 1 0.789857030741539 1 0.95140016078949 experiment 0.420285938516923 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50713649 chr19:50713632 nonsynonymous SNV 0.375 2 4 hm5C_associated_SNPs_13928 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:50713632-50713633
64251 chr19 50755955 50755955 1 + C T rs77895476 50755957 + 50755937 50755977 41 CCCTCTGAATGACAACGTCGCAGCCTTGCTCCACCAGAGCA CCCTCTGAATGACAACGTTGCAGCCTTGCTCCACCAGAGCA < 41bp 1 0.156326146194525 1 0.28753125667572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50755957 chr19:50755955 synonymous SNV . 0 19 hm5C_associated_SNPs_13929 2 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr19:50755947-50755973
64251 chr19 50881882 50881882 1 + C T rs34563687 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG TTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG < 41bp 1 0.0840564270158682 1 0.0866008102893829 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881882 nonsynonymous SNV . 0 1 hm5C_associated_SNPs_13930 0 0 6 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr19 50881886 50881886 1 + G A rs199660328 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG CTCAACCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG < 41bp 1 0.0821695470453032 1 0.0816403925418854 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881886 nonsynonymous SNV 0.208 1 5 hm5C_associated_SNPs_13931 0 0 6 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr19 50881906 50881906 1 + C T rs117587314 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG CTCAGCCTCTGGGCCTGGGGCTTCTCCTGGTGGATCTGAGG < 41bp 1 0.115958244709867 1 0.0608398914337158 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881906 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_13932 0 0 3 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr19 50887601 50887601 1 + G A rs576035899 50887608 + 50887588 50887628 41 CGCGCGGGAGTCAGGGGTCACGGCGGCGTAGGCTGTGGCGG CGCGCGGGAGTCAAGGGTCACGGCGGCGTAGGCTGTGGCGG < 41bp 1 0.704206466622371 1 0.673662304878235 experiment 0.591587066755258 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POLD1 ENSG00000062822 UTR5 Human protein_coding chr19:50887608 chr19:50887601 . . 0 14 hm5C_associated_SNPs_13938 1 0 1 DDX3X POSTAR2 ENCODE chr19:50887600-50887630
64251 chr19 50902141 50902141 1 + C A rs3218768 50902140 + 50902120 50902160 41 GCGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG GCGGCGGCCAGGCCCAGGGCCAGGGGTGCCCCCAAAGCGGG < 41bp 1 0.761381355425751 1 0.759923338890076 experiment 0.477237289148499 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902140 chr19:50902141 synonymous SNV . 0 22 hm5C_associated_SNPs_13939 0 0 7 DDX3X POSTAR2 ENCODE chr19:50902104-50902184
64251 chr19 50905042 50905042 1 + G A rs20582 50905041 + 50905021 50905061 41 CTGTGACCCCACAGGCCCAGCGCAGCCTGTGCCTGGGGGGC CTGTGACCCCACAGGCCCAGCACAGCCTGTGCCTGGGGGGC < 41bp 1 0.366268903406819 1 0.184560835361481 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905041 chr19:50905042 synonymous SNV . 0 22 hm5C_associated_SNPs_13940 1 0 6 AARS POSTAR2 ENCODE chr19:50905032-50905056
64251 chr19 50912126 50912126 1 + G A rs1726790 50912125 + 50912105 50912145 41 CCACAACCTGTGTTACACCACGCTCCTTCGGCCCGGGACTG CCACAACCTGTGTTACACCACACTCCTTCGGCCCGGGACTG < 41bp 1 0.155154516436718 1 0.085919588804245 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912125 chr19:50912126 synonymous SNV . 0 22 hm5C_associated_SNPs_13941 2 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50912116-50912143
64251 chr19 50979773 50979773 1 + C A rs111640675 50979758 + 50979738 50979778 41 CCTCCCGGCGTGCTCCGCGGCTCTTGGCTCACAGCCGTCCC CCTCCCGGCGTGCTCCGCGGCTCTTGGCTCACAGCAGTCCC < 41bp 1 0.288646273850277 1 0.081376850605011 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EMC10;FAM71E1 ENSG00000142530;ENSG00000161671 UTR5 Human other chr19:50979758 chr19:50979773 . . 0 36 hm5C_associated_SNPs_13943 0 0 1 DDX3X POSTAR2 ENCODE chr19:50979768-50979849
64251 chr19 50986074 50986074 1 + G A rs14031 50986072 + 50986052 50986092 41 AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGAC AAAGAGTCGGGGCTGGATGGCCAGGGGCTTCTGGGCCCGAC < 41bp 1 0.648488782745099 1 0.877227187156677 experiment 0.703022434509802 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EMC10 ENSG00000268854 ncRNA_intronic Human antisense chr19:50986072 chr19:50986074 . . 0 23 hm5C_associated_SNPs_13944 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50986053-50986090
64251 chr19 50986092 50986092 1 + C A rs1046246 50986072 + 50986052 50986092 41 AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGAC AAAGAGTCGGGGCTGGATGGCCGGGGGCTTCTGGGCCCGAA < 41bp 1 0.764424831412335 1 0.916110515594482 experiment 0.471150337175331 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EMC10 ENSG00000268854 ncRNA_intronic Human antisense chr19:50986072 chr19:50986092 . . 0 41 hm5C_associated_SNPs_13945 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50986090-50986144
64251 chr19 52729370 52729370 1 + C T rs41275804 52729386 + 52729366 52729406 41 AGCACGGTTCCTCCTCTCCCCAGCCTGGGAAGATGTCTCAC AGCATGGTTCCTCCTCTCCCCAGCCTGGGAAGATGTCTCAC < 41bp 1 0.511495947580357 1 0.389029502868652 experiment 0.977008104839285 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP2R1A ENSG00000268015 ncRNA_intronic Human antisense chr19:52729386 chr19:52729370 . . 0 5 hm5C_associated_SNPs_13947 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:52729287-52729400
64251 chr19 52729370 52729370 1 + C T rs41275804 52729390 + 52729370 52729410 41 CGGTTCCTCCTCTCCCCAGCCTGGGAAGATGTCTCACTGTC TGGTTCCTCCTCTCCCCAGCCTGGGAAGATGTCTCACTGTC < 41bp 1 0.774011174112322 1 0.883174538612366 experiment 0.451977651775355 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000268015 ncRNA_intronic Human antisense chr19:52729390 chr19:52729370 . . 0 1 hm5C_associated_SNPs_13948 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:52729287-52729400
64251 chr19 52795158 52795158 1 + C A rs77506493 52795154 + 52795134 52795174 41 TATGGGCAACGTAGCAAGGCCCATCCCTACAAAATAAAAAA TATGGGCAACGTAGCAAGGCCCATACCTACAAAATAAAAAA < 41bp 1 0.203985964055102 1 0.207830011844635 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF766 ENSG00000269102 ncRNA_intronic Human antisense chr19:52795154 chr19:52795158 . . 0 25 hm5C_associated_SNPs_13949 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52795140-52795160
64251 chr19 54606446 54606446 1 + C G rs138758439 54606432 + 54606412 54606452 41 ACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGA ACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGGCTGGGA < 41bp 1 0.103061004035169 1 0.0950077176094055 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54606432 chr19:54606446 nonsynonymous SNV 0.751 1 35 hm5C_associated_SNPs_13952 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:54606438-54606465
64251 chr19 54631704 54631704 1 + G C rs201201131 54631708 + 54631688 54631728 41 AGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAG AGATGAAGGAGCGGCTCGGGCTGACGGAGATCCGGAAGCAG < 41bp 1 0.520607627676212 1 0.181829810142517 experiment 0.958784744647576 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631708 chr19:54631704 synonymous SNV . 0 17 hm5C_associated_SNPs_13953 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr19:54631683-54631712
64251 chr19 54631704 54631704 1 + G C rs201201131 54631719 + 54631699 54631739 41 CGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTAT CGGCTCGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTAT < 41bp 1 0.762737486056269 1 0.85728394985199 experiment 0.474525027887461 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631719 chr19:54631704 synonymous SNV . 0 6 hm5C_associated_SNPs_13954 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr19:54631683-54631712
64251 chr19 54634978 54634978 1 + G C rs587769211 54634972 + 54634952 54634992 41 GAACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAG GAACCTGCCCTGCCACTGGCCCCATTCCTGGGACTGCCCAG < 41bp 1 0.301146948596687 1 0.0624024569988251 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634972 chr19:54634978 . . 0 27 hm5C_associated_SNPs_13955 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634978 54634978 1 + G C rs587769211 54634973 + 54634953 54634993 41 AACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGG AACCTGCCCTGCCACTGGCCCCATTCCTGGGACTGCCCAGG < 41bp 1 0.150324061155266 1 0.0510143637657166 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634973 chr19:54634978 . . 0 26 hm5C_associated_SNPs_13956 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634978 54634978 1 + G C rs587769211 54634985 + 54634965 54635005 41 CACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTG CACTGGCCCCATTCCTGGGACTGCCCAGGGAGGAGGCCTTG < 41bp 1 0.530430669969192 1 0.0352198779582977 experiment 0.939138660061617 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634985 chr19:54634978 . . 0 14 hm5C_associated_SNPs_13957 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634979 54634979 1 + C T rs587642818 54634972 + 54634952 54634992 41 GAACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAG GAACCTGCCCTGCCACTGGCCCCATTGTTGGGACTGCCCAG < 41bp 1 0.29518581777523 1 0.117136478424072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634972 chr19:54634979 . . 0 28 hm5C_associated_SNPs_13958 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634979 54634979 1 + C T rs587642818 54634973 + 54634953 54634993 41 AACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGG AACCTGCCCTGCCACTGGCCCCATTGTTGGGACTGCCCAGG < 41bp 1 0.253880640180904 1 0.0549671351909637 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634973 chr19:54634979 . . 0 27 hm5C_associated_SNPs_13959 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634979 54634979 1 + C T rs587642818 54634985 + 54634965 54635005 41 CACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTG CACTGGCCCCATTGTTGGGACTGCCCAGGGAGGAGGCCTTG < 41bp 1 0.566392342657897 1 0.0243116617202759 experiment 0.867215314684205 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634985 chr19:54634979 . . 0 15 hm5C_associated_SNPs_13960 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634980 54634980 1 + T C rs587720693 54634972 + 54634952 54634992 41 GAACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAG GAACCTGCCCTGCCACTGGCCCCATTGCCGGGACTGCCCAG < 41bp 1 0.332365128636108 1 0.155141294002533 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634972 chr19:54634980 . . 0 29 hm5C_associated_SNPs_13961 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634980 54634980 1 + T C rs587720693 54634973 + 54634953 54634993 41 AACCTGCCCTGCCACTGGCCCCATTGCTGGGACTGCCCAGG AACCTGCCCTGCCACTGGCCCCATTGCCGGGACTGCCCAGG < 41bp 1 0.231287767035107 1 0.11077281832695 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634973 chr19:54634980 . . 0 28 hm5C_associated_SNPs_13962 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54634980 54634980 1 + T C rs587720693 54634985 + 54634965 54635005 41 CACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGGCCTTG CACTGGCCCCATTGCCGGGACTGCCCAGGGAGGAGGCCTTG < 41bp 1 0.555494065491661 1 0.0318047404289246 experiment 0.889011869016678 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634985 chr19:54634980 . . 0 16 hm5C_associated_SNPs_13963 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr19 54968038 54968038 1 + A G rs35336528 54968028 + 54968008 54968048 41 GAGCTGCAGATCGTGGGCACCTGCCCTGACATCACCAAGCA GAGCTGCAGATCGTGGGCACCTGCCCTGACGTCACCAAGCA < 41bp 1 0.277716216745484 1 0.487178444862366 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54968028 chr19:54968038 nonsynonymous SNV 0.996 0 31 hm5C_associated_SNPs_13964 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54968011-54968057
64251 chr19 54972163 54972163 1 + C T rs117449644 54972145 + 54972125 54972165 41 GGCGGGGGCAGGGGCTGCAGCCCCCAGCGCTGCCTTTGCGG GGCGGGGGCAGGGGCTGCAGCCCCCAGCGCTGCCTTTGTGG < 41bp 1 0.270424717754674 1 0.316470414400101 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972145 chr19:54972163 . . 0 39 hm5C_associated_SNPs_13965 0 0 54 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:54972044-54972232
64251 chr19 54972163 54972163 1 + C T rs117449644 54972146 + 54972126 54972166 41 GCGGGGGCAGGGGCTGCAGCCCCCAGCGCTGCCTTTGCGGA GCGGGGGCAGGGGCTGCAGCCCCCAGCGCTGCCTTTGTGGA < 41bp 1 0.517530661418581 1 0.755773186683655 experiment 0.964938677162837 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972146 chr19:54972163 . . 0 38 hm5C_associated_SNPs_13966 0 0 54 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:54972044-54972232
64251 chr19 54972653 54972653 1 + G T rs183600073 54972656 + 54972636 54972676 41 GACTGTGCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCA GACTGTGCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCA < 41bp 1 0.211815622873631 1 0.341613054275513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972656 chr19:54972653 . . 0 18 hm5C_associated_SNPs_13967 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 54972653 54972653 1 + G T rs183600073 54972657 + 54972637 54972677 41 ACTGTGCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCAC ACTGTGCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCAC < 41bp 1 0.0958592016218046 1 0.155399769544601 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972657 chr19:54972653 . . 0 17 hm5C_associated_SNPs_13968 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 54972653 54972653 1 + G T rs183600073 54972658 + 54972638 54972678 41 CTGTGCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCACC CTGTGCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCACC < 41bp 1 0.0572789887335051 1 0.405533045530319 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972658 chr19:54972653 . . 0 16 hm5C_associated_SNPs_13969 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 54972653 54972653 1 + G T rs183600073 54972659 + 54972639 54972679 41 TGTGCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCACCA TGTGCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCACCA < 41bp 1 0.163402069525589 1 0.620402336120605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972659 chr19:54972653 . . 0 15 hm5C_associated_SNPs_13970 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 54972653 54972653 1 + G T rs183600073 54972661 + 54972641 54972681 41 TGCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCACCACC TGCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCACCACC < 41bp 1 0.0607580629956287 1 0.561926186084747 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972661 chr19:54972653 . . 0 13 hm5C_associated_SNPs_13971 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 54972653 54972653 1 + G T rs183600073 54972662 + 54972642 54972682 41 GCCCGTCCTCGGCCCCCCACCCTGAAGTGCCAGCACCACCA GCCCGTCCTCGTCCCCCCACCCTGAAGTGCCAGCACCACCA < 41bp 1 0.207342801877795 1 0.493400484323502 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54972662 chr19:54972653 . . 0 12 hm5C_associated_SNPs_13972 0 0 39 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:54972580-54972680
64251 chr19 55897302 55897302 1 + C G rs116572311 55897317 + 55897297 55897337 41 TTCCTCTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGA TTCCTGTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGA < 41bp 1 0.529413492168192 1 0.36382469534874 experiment 0.941173015663615 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL28 ENSG00000108107 UTR5 Human protein_coding chr19:55897317 chr19:55897302 . . 0 6 hm5C_associated_SNPs_13978 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:55897300-55897320
64251 chr19 55897302 55897302 1 + C G rs116572311 55897319 + 55897299 55897339 41 CCTCTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGAGC CCTGTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGAGC < 41bp 1 0.208027001409833 1 0.316331088542938 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL28 ENSG00000108107 UTR5 Human protein_coding chr19:55897319 chr19:55897302 . . 0 4 hm5C_associated_SNPs_13979 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:55897300-55897320
64251 chr19 55897327 55897327 1 + A C rs17700376 55897317 + 55897297 55897337 41 TTCCTCTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGA TTCCTCTTTCCGTCTCAGGTCGCCGCTGCGCAGGGAGGTGA < 41bp 1 0.499634024133543 1 0.376830041408539 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL28 ENSG00000108107 UTR5 Human protein_coding chr19:55897317 chr19:55897327 . . 0 31 hm5C_associated_SNPs_13980 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:55897326-55897327
64251 chr19 55897327 55897327 1 + A C rs17700376 55897319 + 55897299 55897339 41 CCTCTTTCCGTCTCAGGTCGCCGCTGCGAAGGGAGGTGAGC CCTCTTTCCGTCTCAGGTCGCCGCTGCGCAGGGAGGTGAGC < 41bp 1 0.208488557779194 1 0.303070783615112 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL28 ENSG00000108107 UTR5 Human protein_coding chr19:55897319 chr19:55897327 . . 0 29 hm5C_associated_SNPs_13981 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:55897326-55897327
64251 chr19 55901846 55901846 1 + T C rs548190178 55901856 + 55901836 55901876 41 GTGCTGGCATTACAGGCGCTCGAGGCTTTCTGATGTGGCTG GTGCTGGCATCACAGGCGCTCGAGGCTTTCTGATGTGGCTG < 41bp 1 0.738516561025395 1 0.755981147289276 experiment 0.522966877949211 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901856 chr19:55901846 . . 0 11 hm5C_associated_SNPs_13982 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:55901836-55901865
64251 chr19 55901857 55901857 1 + G A rs143306924 55901856 + 55901836 55901876 41 GTGCTGGCATTACAGGCGCTCGAGGCTTTCTGATGTGGCTG GTGCTGGCATTACAGGCGCTCAAGGCTTTCTGATGTGGCTG < 41bp 1 0.692821313980563 1 0.734349012374878 experiment 0.614357372038875 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901856 chr19:55901857 . . 0 22 hm5C_associated_SNPs_13983 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:55901836-55901865
64251 chr19 55901865 55901865 1 + C G rs148318618 55901856 + 55901836 55901876 41 GTGCTGGCATTACAGGCGCTCGAGGCTTTCTGATGTGGCTG GTGCTGGCATTACAGGCGCTCGAGGCTTTGTGATGTGGCTG < 41bp 1 0.712682429405543 1 0.713022410869598 experiment 0.574635141188914 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901856 chr19:55901865 . . 0 30 hm5C_associated_SNPs_13984 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:55901836-55901865
64251 chr19 55993895 55993895 1 + C T rs541614777 55993914 + 55993894 55993934 41 CCGCCCCCGCTTCTGCGGAGCGGCCCTACAAATGTGCCGAG CTGCCCCCGCTTCTGCGGAGCGGCCCTACAAATGTGCCGAG < 41bp 1 0.321442824117306 1 0.399801403284073 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF628 ENSG00000197483 CDS Human protein_coding chr19:55993914 chr19:55993895 synonymous SNV . 0 2 hm5C_associated_SNPs_13987 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:55993883-55993908
64251 chr19 56152434 56152434 1 + C T rs561338539 56152437 + 56152417 56152457 41 CCCCGCGTCCCCGGCGCCGCCGGCCCGGAGCTGCCCGGAAG CCCCGCGTCCCCGGCGCTGCCGGCCCGGAGCTGCCCGGAAG < 41bp 1 0.54807285886806 1 0.446351289749146 experiment 0.903854282263881 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF580 ENSG00000171425;ENSG00000173581;ENSG00000213015 UTR5 Human other chr19:56152437 chr19:56152434 . . 0 18 hm5C_associated_SNPs_13989 0 0 8 CSTF2T POSTAR2 ENCODE chr19:56152420-56152453
64251 chr19 56154472 56154472 1 + C T rs188200089 56154462 + 56154442 56154482 41 CTGACCCACACAGCGTCACTCACTCCCACACACACCCCCTG CTGACCCACACAGCGTCACTCACTCCCACATACACCCCCTG < 41bp 1 0.161591311217438 1 0.201291233301163 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control ZNF580 ENSG00000213015 UTR3 Human protein_coding chr19:56154462 chr19:56154472 . . 0 31 hm5C_associated_SNPs_13990 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:56154424-56154484
64251 chr19 56172453 56172453 1 + C T rs114531079 56172435 + 56172415 56172455 41 ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGATGG < 41bp 1 0.581583743811509 1 0.667426586151123 experiment 0.836832512376982 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172435 chr19:56172453 synonymous SNV . 0 39 hm5C_associated_SNPs_13991 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr19 56172453 56172453 1 + C T rs114531079 56172437 + 56172417 56172457 41 TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGATGGTC < 41bp 1 0.149488538667489 1 0.100988328456879 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172437 chr19:56172453 synonymous SNV . 0 37 hm5C_associated_SNPs_13992 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr19 56172453 56172453 1 + C T rs114531079 56172438 + 56172418 56172458 41 CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGATGGTCT < 41bp 1 0.662969792412587 1 0.663124978542328 experiment 0.674060415174826 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172438 chr19:56172453 synonymous SNV . 0 36 hm5C_associated_SNPs_13993 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr19 56186643 56186643 1 + G T rs567640180 56186624 + 56186604 56186644 41 GTCTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGC GTCTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTC < 41bp 1 0.451292262322818 1 0.0727255940437317 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186624 chr19:56186643 . . 0 40 hm5C_associated_SNPs_13994 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186625 + 56186605 56186645 41 TCTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCC TCTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCC < 41bp 1 0.710962167762909 1 0.626366496086121 experiment 0.578075664474182 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186625 chr19:56186643 . . 0 39 hm5C_associated_SNPs_13995 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186626 + 56186606 56186646 41 CTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCC CTCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCC < 41bp 1 0.456188586217701 1 0.087258905172348 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186626 chr19:56186643 . . 0 38 hm5C_associated_SNPs_13996 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186627 + 56186607 56186647 41 TCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCCC TCCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCCC < 41bp 1 0.333347109717278 1 0.138757050037384 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186627 chr19:56186643 . . 0 37 hm5C_associated_SNPs_13997 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186628 + 56186608 56186648 41 CCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCCCT CCTCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCCCT < 41bp 1 0.593875596582447 1 0.332796633243561 experiment 0.812248806835106 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186628 chr19:56186643 . . 0 36 hm5C_associated_SNPs_13998 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186630 + 56186610 56186650 41 TCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCCCTTC TCGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCCCTTC < 41bp 1 0.648682723653667 1 0.209959506988525 experiment 0.702634552692667 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186630 chr19:56186643 . . 0 34 hm5C_associated_SNPs_13999 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186631 + 56186611 56186651 41 CGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCCCTTCT CGGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCCCTTCT < 41bp 1 0.382529811851399 1 0.34892326593399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186631 chr19:56186643 . . 0 33 hm5C_associated_SNPs_14000 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186632 + 56186612 56186652 41 GGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCGCCCCTTCTG GGCGGCTCCCCTCCCCCGCCCGGCTCTCCGCTCCCCTTCTG < 41bp 1 0.687637766335423 1 0.538191616535187 experiment 0.624724467329154 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186632 chr19:56186643 . . 0 32 hm5C_associated_SNPs_14001 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56186643 56186643 1 + G T rs567640180 56186655 + 56186635 56186675 41 CTCTCCGCGCCCCTTCTGGGCGGCGGGGCGGCGGAGCCGTC CTCTCCGCTCCCCTTCTGGGCGGCGGGGCGGCGGAGCCGTC < 41bp 1 0.742229952104372 1 0.460943847894669 experiment 0.515540095791257 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186655 chr19:56186643 . . 0 9 hm5C_associated_SNPs_14002 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr19 56657749 56657749 1 + C G rs531556902 56657743 + 56657723 56657763 41 CCTCACCACCCGAGTGAGCGCTGCCCCCTCACAGAGACCTC CCTCACCACCCGAGTGAGCGCTGCCCGCTCACAGAGACCTC < 41bp 1 0.444709722568139 1 0.165147632360458 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF444 ENSG00000167685 UTR5 Human protein_coding chr19:56657743 chr19:56657749 . . 0 27 hm5C_associated_SNPs_14003 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:56657712-56657750
64251 chr19 57050430 57050430 1 + C T rs189847863 57050446 + 57050426 57050466 41 GCCGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGG GCCGTTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGG < 41bp 1 0.326909464460078 1 0.110292106866837 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050446 chr19:57050430 nonsynonymous SNV 0.000 0 5 hm5C_associated_SNPs_14005 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050430 57050430 1 + C T rs189847863 57050447 + 57050427 57050467 41 CCGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGC CCGTTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGC < 41bp 1 0.337581813418635 1 0.118879497051239 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050447 chr19:57050430 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_14006 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050430 57050430 1 + C T rs189847863 57050448 + 57050428 57050468 41 CGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCG CGTTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCG < 41bp 1 0.797492521433012 1 0.28653883934021 experiment 0.405014957133976 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050448 chr19:57050430 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_14007 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050430 57050430 1 + C T rs189847863 57050449 + 57050429 57050469 41 GCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGG GTTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGG < 41bp 1 0.726078974860411 1 0.241384297609329 experiment 0.547842050279178 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050449 chr19:57050430 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_14008 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050434 57050434 1 + C G rs181108606 57050446 + 57050426 57050466 41 GCCGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGG GCCGCTCCGGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGG < 41bp 1 0.395457258254816 1 0.0840331315994263 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050446 chr19:57050434 nonsynonymous SNV 0.000 0 9 hm5C_associated_SNPs_14009 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050434 57050434 1 + C G rs181108606 57050447 + 57050427 57050467 41 CCGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGC CCGCTCCGGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGC < 41bp 1 0.409175994996244 1 0.200893193483353 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050447 chr19:57050434 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_14010 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050434 57050434 1 + C G rs181108606 57050448 + 57050428 57050468 41 CGCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCG CGCTCCGGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCG < 41bp 1 0.778488312297869 1 0.28151535987854 experiment 0.443023375404262 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050448 chr19:57050434 nonsynonymous SNV 0.000 0 7 hm5C_associated_SNPs_14011 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050434 57050434 1 + C G rs181108606 57050449 + 57050429 57050469 41 GCTCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGG GCTCCGGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGG < 41bp 1 0.772035121764876 1 0.346099823713303 experiment 0.455929756470249 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050449 chr19:57050434 nonsynonymous SNV 0.000 0 6 hm5C_associated_SNPs_14012 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57050434 57050434 1 + C G rs181108606 57050451 + 57050431 57050471 41 TCCCGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGGGC TCCGGGGTAGAGGCGCCCCCCGCACAAAGCCCCGGGCGGGC < 41bp 1 0.753233013726963 1 0.529732346534729 experiment 0.493533972546073 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050451 chr19:57050434 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_14013 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr19 57901291 57901291 1 + G A rs115744302 57901295 + 57901275 57901315 41 ACCAACTTCGGCCTATGGCTCTGTCTGACGTCACCGAAGTG ACCAACTTCGGCCTATAGCTCTGTCTGACGTCACCGAAGTG < 41bp 1 0.183339533052519 1 0.0753061473369598 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF548 ENSG00000188785;ENSG00000269533 UTR5 Human other chr19:57901295 chr19:57901291 . . 0 17 hm5C_associated_SNPs_14028 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:57901280-57901300
64251 chr19 58258231 58258231 1 + G A rs139282139 58258227 + 58258207 58258247 41 GTGTATTTTCCAGTGAGAGACCGCGGAGTGTTGGGTCGTGT GTGTATTTTCCAGTGAGAGACCGCAGAGTGTTGGGTCGTGT < 41bp 1 0.223738714990917 1 0.379572421312332 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF776 ENSG00000152443 UTR5 Human protein_coding chr19:58258227 chr19:58258231 . . 0 25 hm5C_associated_SNPs_14029 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:58258217-58258243
64251 chr19 58357166 58357166 1 + G A rs528213171 58357147 + 58357127 58357167 41 TTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTGT TTCCCAGCACTTTGGGAGGCCAGATTCCTTGAGACCAGTAT < 41bp 1 0.415746546561329 1 0.413306444883347 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF587B ENSG00000269343 UTR3 Human protein_coding chr19:58357147 chr19:58357166 . . 0 40 hm5C_associated_SNPs_14031 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58357153-58357174
64251 chr19 58361243 58361243 1 + C G rs114721771 58361263 + 58361243 58361283 41 CGGCGATGCGGGTGTTTCCCCAGTTTGTGGCCCCTGAGTGC GGGCGATGCGGGTGTTTCCCCAGTTTGTGGCCCCTGAGTGC < 41bp 1 0.346774464326569 1 0.741768836975098 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF587 ENSG00000198466 UTR5 Human protein_coding chr19:58361263 chr19:58361243 . . 0 1 hm5C_associated_SNPs_14032 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:58361229-58361260
64251 chr19 58361264 58361264 1 + A G rs551137689 58361263 + 58361243 58361283 41 CGGCGATGCGGGTGTTTCCCCAGTTTGTGGCCCCTGAGTGC CGGCGATGCGGGTGTTTCCCCGGTTTGTGGCCCCTGAGTGC < 41bp 1 0.370194080503188 1 0.740800797939301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF587 ENSG00000198466 UTR5 Human protein_coding chr19:58361263 chr19:58361264 . . 0 22 hm5C_associated_SNPs_14033 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58361256-58361304
64251 chr19 58361277 58361277 1 + T A rs150767167 58361263 + 58361243 58361283 41 CGGCGATGCGGGTGTTTCCCCAGTTTGTGGCCCCTGAGTGC CGGCGATGCGGGTGTTTCCCCAGTTTGTGGCCCCAGAGTGC < 41bp 1 0.285313965136289 1 0.383722424507141 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF587 ENSG00000198466 UTR5 Human protein_coding chr19:58361263 chr19:58361277 . . 0 35 hm5C_associated_SNPs_14034 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58361256-58361304
64251 chr19 58757770 58757770 1 + C T rs150558952 58757778 + 58757758 58757798 41 TGACACTGGAGACCTGGGAGCATATTGTCTCCCTGGGTAAG TGACACTGGAGATCTGGGAGCATATTGTCTCCCTGGGTAAG < 41bp 1 0.2131730965476 1 0.0533583164215088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58757778 chr19:58757770 nonsynonymous SNV 0.772 1 13 hm5C_associated_SNPs_14046 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58757677-58757776
64251 chr19 58898650 58898650 1 + A G rs114515295 58898652 + 58898632 58898672 41 CGGCCTCTTCCTGTCTGTACCAGGGCGGCGCGTGGTCTACG CGGCCTCTTCCTGTCTGTGCCAGGGCGGCGCGTGGTCTACG < 41bp 1 0.72169949235999 1 0.748180150985718 experiment 0.556601015280021 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS5 ENSG00000083845 UTR5 Human protein_coding chr19:58898652 chr19:58898650 . . 0 19 hm5C_associated_SNPs_14048 0 0 45 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58898620-58898680
64251 chr19 58898650 58898650 1 + A G rs114515295 58898657 + 58898637 58898677 41 TCTTCCTGTCTGTACCAGGGCGGCGCGTGGTCTACGCCGAG TCTTCCTGTCTGTGCCAGGGCGGCGCGTGGTCTACGCCGAG < 41bp 1 0.669901732132177 1 0.559240281581879 experiment 0.660196535735646 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS5 ENSG00000083845 UTR5 Human protein_coding chr19:58898657 chr19:58898650 . . 0 14 hm5C_associated_SNPs_14049 0 0 45 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58898620-58898680
64251 chr19 58898674 58898674 1 + C T rs111590146 58898657 + 58898637 58898677 41 TCTTCCTGTCTGTACCAGGGCGGCGCGTGGTCTACGCCGAG TCTTCCTGTCTGTACCAGGGCGGCGCGTGGTCTACGCTGAG < 41bp 1 0.545678320906794 1 0.444034069776535 experiment 0.908643358186412 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS5 ENSG00000083845 UTR5 Human protein_coding chr19:58898657 chr19:58898674 . . 0 38 hm5C_associated_SNPs_14050 0 0 45 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58898620-58898680
64251 chr19 58906084 58906084 1 + C T rs144955468 58906069 + 58906049 58906089 41 GGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGACGAGCT GGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGATGAGCT < 41bp 1 0.186323719851103 1 0.102852433919907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906069 chr19:58906084 synonymous SNV . 0 36 hm5C_associated_SNPs_14051 0 0 37 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906084 58906084 1 + C T rs144955468 58906094 + 58906074 58906114 41 AGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGC AGAAGAAGGATGAGCTGGAGCGTGTGGCCAAGTCCAACCGC < 41bp 1 0.677225067046376 1 0.333525657653809 experiment 0.645549865907247 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906094 chr19:58906084 synonymous SNV . 0 11 hm5C_associated_SNPs_14052 0 0 37 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906084 58906084 1 + C T rs144955468 58906102 + 58906082 58906122 41 GACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTC GATGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTC < 41bp 1 0.675307674895084 1 0.499453186988831 experiment 0.649384650209831 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906102 chr19:58906084 synonymous SNV . 0 3 hm5C_associated_SNPs_14053 0 0 37 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 59055857 59055857 1 + G A rs149761075 59055838 + 59055818 59055858 41 CGGCTCTTTCTGCGAGCGGGCGCGCGGGCGAGCGGTTGTGC CGGCTCTTTCTGCGAGCGGGCGCGCGGGCGAGCGGTTGTAC < 41bp 1 0.301597783534586 1 0.819216430187225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM28 ENSG00000130726 UTR5 Human protein_coding chr19:59055838 chr19:59055857 . . 0 40 hm5C_associated_SNPs_14055 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:59055820-59055900
64251 chr19 59061961 59061961 1 + C T rs201545775 59061965 + 59061945 59061985 41 AGCCTGGCTCTGTTCTCTGTCCTGTCACCCCATCCCCACTC AGCCTGGCTCTGTTCTTTGTCCTGTCACCCCATCCCCACTC < 41bp 1 0.278092793837795 1 0.133128941059113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 UTR3 Human protein_coding chr19:59061965 chr19:59061961 . . 0 17 hm5C_associated_SNPs_14056 0 0 32 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:59061880-59062000
64251 chr19 59094136 59094136 1 + A G rs8106379 59094134 + 59094114 59094154 41 CAGACGCTTCCATGAACTCTCAAGTGTGACTTATTACAGCC CAGACGCTTCCATGAACTCTCAGGTGTGACTTATTACAGCC < 41bp 1 0.638488316068591 1 0.694903194904327 experiment 0.723023367862817 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59094134 chr19:59094136 . . 0 23 hm5C_associated_SNPs_14058 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:59094087-59094136
64251 chr19 59095038 59095038 1 + A G rs556997402 59095020 + 59095000 59095040 41 CTGTCTCCAGCTGTAGGGCCCTGCCAGGAAGCCTCTATATG CTGTCTCCAGCTGTAGGGCCCTGCCAGGAAGCCTCTATGTG < 41bp 1 0.261849707051889 1 0.0462242662906647 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPBD1P1 ENSG00000213753 ncRNA_exonic Human transcribed_processed_pseudogene chr19:59095020 chr19:59095038 . . 0 39 hm5C_associated_SNPs_14059 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:59095017-59095040
64251 chr20 280661 280661 1 + G C rs566236348 280680 + 280660 280700 41 AGCTACGAACCCTAGAGAAGCAGCTAGCTGGAGCTCATGTG ACCTACGAACCCTAGAGAAGCAGCTAGCTGGAGCTCATGTG < 41bp 1 0.554851350450436 1 0.516776204109192 experiment 0.890297299099128 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZCCHC3 ENSG00000247315 ncRNA_exonic Human protein_coding chr20:280680 chr20:280661 . . 0 2 hm5C_associated_SNPs_14063 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr20:280638-280666
64251 chr20 280671 280671 1 + C A rs14181 280680 + 280660 280700 41 AGCTACGAACCCTAGAGAAGCAGCTAGCTGGAGCTCATGTG AGCTACGAACCATAGAGAAGCAGCTAGCTGGAGCTCATGTG < 41bp 1 0.504686065672892 1 0.501111924648285 experiment 0.990627868654216 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZCCHC3 ENSG00000247315 ncRNA_exonic Human protein_coding chr20:280680 chr20:280671 . . 0 12 hm5C_associated_SNPs_14064 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:280671-280672
64251 chr20 307731 307731 1 + C T rs542568611 307750 + 307730 307770 41 GCCCCTCCCCACGTCGCCCCCTCCTGCACAGCCACCAGCAG GTCCCTCCCCACGTCGCCCCCTCCTGCACAGCCACCAGCAG < 41bp 1 0.312094881213955 1 0.715392649173737 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307750 chr20:307731 . . 0 2 hm5C_associated_SNPs_14065 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:307720-307740
64251 chr20 307949 307949 1 + C T rs187291670 307962 + 307942 307982 41 CAACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGA CAACGCATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGA < 41bp 1 0.114587326360057 1 0.0831024646759033 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307962 chr20:307949 . . 0 8 hm5C_associated_SNPs_14066 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307963 + 307943 307983 41 AACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAG AACGCATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAG < 41bp 1 0.0278763912586277 1 0.153101176023483 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307963 chr20:307949 . . 0 7 hm5C_associated_SNPs_14067 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307964 + 307944 307984 41 ACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGG ACGCATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGG < 41bp 1 0.0431591448218544 1 0.0802841782569885 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307964 chr20:307949 . . 0 6 hm5C_associated_SNPs_14068 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307965 + 307945 307985 41 CGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGG CGCATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGG < 41bp 1 0.13951975096858 1 0.426798462867737 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307965 chr20:307949 . . 0 5 hm5C_associated_SNPs_14069 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307967 + 307947 307987 41 CACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGC CATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGC < 41bp 1 0.0488389897972495 1 0.0569915473461151 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307967 chr20:307949 . . 0 3 hm5C_associated_SNPs_14070 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307968 + 307948 307988 41 ACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCG ATGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCG < 41bp 1 0.0164131358763758 1 0.411944836378098 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307968 chr20:307949 . . 0 2 hm5C_associated_SNPs_14071 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307949 307949 1 + C T rs187291670 307969 + 307949 307989 41 CGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCGC TGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCGC < 41bp 1 0.137816615945581 1 0.154353559017181 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307969 chr20:307949 . . 0 1 hm5C_associated_SNPs_14072 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307962 + 307942 307982 41 CAACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGA CAACGCACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGA < 41bp 1 0.0792583953651008 1 0.151968985795975 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307962 chr20:307966 . . 0 25 hm5C_associated_SNPs_14073 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307963 + 307943 307983 41 AACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAG AACGCACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAG < 41bp 1 0.0620454472980221 1 0.0763765871524811 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307963 chr20:307966 . . 0 24 hm5C_associated_SNPs_14074 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307964 + 307944 307984 41 ACGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGG ACGCACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAGG < 41bp 1 0.102119420179405 1 0.072459489107132 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307964 chr20:307966 . . 0 23 hm5C_associated_SNPs_14075 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307965 + 307945 307985 41 CGCACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGG CGCACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAGGG < 41bp 1 0.0694425992321635 1 0.0720347166061401 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307965 chr20:307966 . . 0 22 hm5C_associated_SNPs_14076 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307967 + 307947 307987 41 CACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGC CACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAGGGGC < 41bp 1 0.0311132352096681 1 0.0749739110469818 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307967 chr20:307966 . . 0 20 hm5C_associated_SNPs_14077 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307968 + 307948 307988 41 ACGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCG ACGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAGGGGCG < 41bp 1 0.0180053709083699 1 0.439502745866776 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307968 chr20:307966 . . 0 19 hm5C_associated_SNPs_14078 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 307966 307966 1 + T C rs139428694 307969 + 307949 307989 41 CGCGCCTCCTGCGCCCCTCCCTTCCCTGGGGGGAGGGGCGC CGCGCCTCCTGCGCCCCCCCCTTCCCTGGGGGGAGGGGCGC < 41bp 1 0.108187815370648 1 0.228245884180069 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307969 chr20:307966 . . 0 18 hm5C_associated_SNPs_14079 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:307930-307975
64251 chr20 330408 330408 1 + C G rs11556643 330392 + 330372 330412 41 CTGCACCTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAG CTGCACCTCTTCTATGAGGACTGTGCAGGCACTGCTGTCAG < 41bp 1 0.37243549752329 1 0.0443779826164246 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330392 chr20:330408 nonsynonymous SNV 0.046 2 37 hm5C_associated_SNPs_14080 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr20 368883 368883 1 + G A rs61740293 368903 + 368883 368923 41 GAGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTAC AAGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTAC < 41bp 1 0.697590299975518 1 0.778970837593079 experiment 0.604819400048964 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368903 chr20:368883 nonsynonymous SNV 0.029 0 1 hm5C_associated_SNPs_14081 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:368854-368885
64251 chr20 1145000 1145000 1 + C A rs114332593 1145015 + 1144995 1145035 41 GAGATCTGGCTTCCCAAGAGCACTTATTGACCCTTCCTCAG GAGATATGGCTTCCCAAGAGCACTTATTGACCCTTCCTCAG < 41bp 1 0.371970422825821 1 0.0315294861793518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1145015 chr20:1145000 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_14082 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:1144977-1145007
64251 chr20 1287462 1287462 1 + G A rs117202877 1287461 + 1287441 1287481 41 TCCTGTGAGGTAGCTAAGCCCGGCAAGCTCAGTGCTGGGGT TCCTGTGAGGTAGCTAAGCCCAGCAAGCTCAGTGCTGGGGT < 41bp 1 0.754457878818119 1 0.728946566581726 experiment 0.491084242363762 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNPH ENSG00000101298 UTR3 Human protein_coding chr20:1287461 chr20:1287462 . . 0 22 hm5C_associated_SNPs_14084 0 0 2 UPF1 POSTAR2 ENCODE chr20:1287453-1287513
64251 chr20 2125695 2125695 1 + G A rs189186200 2125694 + 2125674 2125714 41 TAGGGGCCCATTTGTGGGCTCGCCACCTTCAGGCTTCCCCA TAGGGGCCCATTTGTGGGCTCACCACCTTCAGGCTTCCCCA < 41bp 1 0.700079630567931 1 0.349200844764709 experiment 0.599840738864137 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2125694 chr20:2125695 . . 0 22 hm5C_associated_SNPs_14087 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2125675-2125695
64251 chr20 2125793 2125793 1 + C G rs73074252 2125808 + 2125788 2125828 41 CACCTCCCTAGGGGAAGCTTCCCTCCCCCTGGGCTGCTGCT CACCTGCCTAGGGGAAGCTTCCCTCCCCCTGGGCTGCTGCT < 41bp 1 0.0279499859883725 1 0.0249592363834381 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2125808 chr20:2125793 . . 0 6 hm5C_associated_SNPs_14088 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:2125747-2125798
64251 chr20 2128405 2128405 1 + G A rs191490864 2128396 + 2128376 2128416 41 TCCCTCCTAGGCCTGTCTGGCAGCCCCCAGACAGACGTAGC TCCCTCCTAGGCCTGTCTGGCAGCCCCCAAACAGACGTAGC < 41bp 1 0.409180688084649 1 0.51375812292099 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2128396 chr20:2128405 . . 0 30 hm5C_associated_SNPs_14089 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:2128400-2128420
64251 chr20 2128405 2128405 1 + G A rs191490864 2128399 + 2128379 2128419 41 CTCCTAGGCCTGTCTGGCAGCCCCCAGACAGACGTAGCTCC CTCCTAGGCCTGTCTGGCAGCCCCCAAACAGACGTAGCTCC < 41bp 1 0.226458831052349 1 0.255340486764908 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2128399 chr20:2128405 . . 0 27 hm5C_associated_SNPs_14090 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:2128400-2128420
64251 chr20 2633466 2633466 1 + C G rs73576045 2633479 + 2633459 2633499 41 TGACGCTCGCGCCCCGGCTCCCGTTCCAGGTGCTGTTGCAC TGACGCTGGCGCCCCGGCTCCCGTTCCAGGTGCTGTTGCAC < 41bp 1 0.0417188407827827 1 0.0981684923171997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIR1292 ENSG00000221062 ncRNA_exonic Human other chr20:2633479 chr20:2633466 . . 0 8 hm5C_associated_SNPs_14091 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr20:2633463-2633506
64251 chr20 2633466 2633466 1 + C G rs73576045 2633484 + 2633464 2633504 41 CTCGCGCCCCGGCTCCCGTTCCAGGTGCTGTTGCACGTGCT CTGGCGCCCCGGCTCCCGTTCCAGGTGCTGTTGCACGTGCT < 41bp 1 0.23314754708285 1 0.707959413528442 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIR1292 ENSG00000221062 ncRNA_exonic Human other chr20:2633484 chr20:2633466 . . 0 3 hm5C_associated_SNPs_14092 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr20:2633463-2633506
64251 chr20 2634861 2634861 1 + C T rs561345024 2634870 + 2634850 2634890 41 GCCAGGCTTTGCAGTGATGACTTGCGAATCAAATCTGTCAA GCCAGGCTTTGTAGTGATGACTTGCGAATCAAATCTGTCAA < 41bp 1 0.232966008370669 1 0.0966017842292786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD110 ENSG00000221116 ncRNA_exonic Human snoRNA chr20:2634870 chr20:2634861 . . 0 12 hm5C_associated_SNPs_14093 0 0 58 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:2634788-2634869
64251 chr20 2634919 2634919 1 + A C rs73611742 2634915 + 2634895 2634935 41 CTGAGTGCAATCACTGATGTCTCCATGTCTCTGAGCAATGC CTGAGTGCAATCACTGATGTCTCCCTGTCTCTGAGCAATGC < 41bp 1 0.207973333839903 1 0.0352165400981903 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD110 ENSG00000221116 ncRNA_exonic Human snoRNA chr20:2634915 chr20:2634919 . . 0 25 hm5C_associated_SNPs_14094 0 0 103 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:2634901-2634921
64251 chr20 2634919 2634919 1 + A C rs73611742 2634925 + 2634905 2634945 41 TCACTGATGTCTCCATGTCTCTGAGCAATGCCTGATGGGGA TCACTGATGTCTCCCTGTCTCTGAGCAATGCCTGATGGGGA < 41bp 1 0.535908483254696 1 0.527534484863281 experiment 0.928183033490607 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD110 ENSG00000221116 ncRNA_exonic Human snoRNA chr20:2634925 chr20:2634919 . . 0 15 hm5C_associated_SNPs_14095 0 0 103 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:2634901-2634921
64251 chr20 2635157 2635157 1 + C T rs144743768 2635143 + 2635123 2635163 41 TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCCGCAATA TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCTGCAATA < 41bp 1 0.562838780093158 1 0.183098644018173 experiment 0.874322439813684 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635143 chr20:2635157 synonymous SNV . 0 35 hm5C_associated_SNPs_14096 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr20 2635763 2635763 1 + A G rs577907502 2635780 + 2635760 2635800 41 GAAAGAGGAGGTAGAGTAAACCTACCCCATATACACCTCAG GAAGGAGGAGGTAGAGTAAACCTACCCCATATACACCTCAG < 41bp 1 0.0606804035455217 1 0.263124048709869 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA51 ENSG00000271798 ncRNA_exonic Human snoRNA chr20:2635780 chr20:2635763 . . 0 4 hm5C_associated_SNPs_14097 0 0 29 CSTF2 POSTAR2 GSE40859,GSM1003588 chr20:2635720-2635780
64251 chr20 2636749 2636749 1 + G A rs140275178 2636757 + 2636737 2636777 41 TTGGGGGATCACGGTGATGGCTGACCAGGGCTCCCTGACCT TTGGGGGATCACAGTGATGGCTGACCAGGGCTCCCTGACCT < 41bp 1 0.474401218742988 1 0.0545556545257568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD86 ENSG00000212498 ncRNA_exonic Human snoRNA chr20:2636757 chr20:2636749 . . 0 13 hm5C_associated_SNPs_14098 0 0 45 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:2636740-2636760
64251 chr20 2636749 2636749 1 + G A rs140275178 2636761 + 2636741 2636781 41 GGGATCACGGTGATGGCTGACCAGGGCTCCCTGACCTATAC GGGATCACAGTGATGGCTGACCAGGGCTCCCTGACCTATAC < 41bp 1 0.539664742365829 1 0.502054929733276 experiment 0.920670515268342 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD86 ENSG00000212498 ncRNA_exonic Human snoRNA chr20:2636761 chr20:2636749 . . 0 9 hm5C_associated_SNPs_14099 0 0 45 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:2636740-2636760
64251 chr20 2843961 2843961 1 + C T rs78044640 2843957 + 2843937 2843977 41 CTCGTGTTGCGGAGACTTTACCCCCTGGCCATCCAGATATG CTCGTGTTGCGGAGACTTTACCCCTTGGCCATCCAGATATG < 41bp 1 0.349780970977544 1 0.0749313533306122 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2843957 chr20:2843961 synonymous SNV . 0 25 hm5C_associated_SNPs_14101 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:2843950-2843972
64251 chr20 2846052 2846052 1 + T C rs61729229 2846046 + 2846026 2846066 41 AAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGACT AAGCCCAGCTTTCCTGCAGGCTCTGGCGGCTGAAGCTGACT < 41bp 1 0.183007882665335 1 0.0580622553825378 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2846046 chr20:2846052 nonsynonymous SNV 0.998 4 27 hm5C_associated_SNPs_14102 0 0 1 LSM11 POSTAR2 ENCODE chr20:2846052-2846136
64251 chr20 3629788 3629788 1 + C G rs442753 3629802 + 3629782 3629822 41 AGCTTTCTCCGGCCTCAGGGCAGAAAAAGGGAATGGCAGGG AGCTTTGTCCGGCCTCAGGGCAGAAAAAGGGAATGGCAGGG < 41bp 1 0.590822457274106 1 0.519295275211334 experiment 0.818355085451788 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATRN ENSG00000088812 UTR3 Human protein_coding chr20:3629802 chr20:3629788 . . 0 7 hm5C_associated_SNPs_14103 0 0 3 IGF2BP1 POSTAR2 ENCODE chr20:3629782-3629847
64251 chr20 3849218 3849218 1 + T C rs552988814 3849221 + 3849201 3849241 41 AACCCAGGATGCGGAGGTTGCAGTGAGCCGAGATTGTGCCA AACCCAGGATGCGGAGGCTGCAGTGAGCCGAGATTGTGCCA < 41bp 1 0.588055669653885 1 0.768748044967651 experiment 0.82388866069223 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAVS ENSG00000088888 UTR3 Human protein_coding chr20:3849221 chr20:3849218 . . 0 18 hm5C_associated_SNPs_14115 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr20:3849218-3849219
64251 chr20 3893159 3893159 1 + T C rs149583615 3893142 + 3893122 3893162 41 TTTTTGGTCTCTGCTGTCTTCTTACTGGCTGTACCACTTTT TTTTTGGTCTCTGCTGTCTTCTTACTGGCTGTACCACCTTT < 41bp 1 0.139819752604035 1 0.0810133814811707 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PANK2 ENSG00000125779 CDS Human protein_coding chr20:3893142 chr20:3893159 synonymous SNV . 0 38 hm5C_associated_SNPs_14116 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:3893102-3893201
64251 chr20 4163326 4163326 1 + A G rs200667541 4163341 + 4163321 4163361 41 TACCCACCTGAGCTCTGGTACCGCAAGATCTGCGGCTTTGA TACCCGCCTGAGCTCTGGTACCGCAAGATCTGCGGCTTTGA < 41bp 1 0.297907143574788 1 0.0732690393924713 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMOX ENSG00000088826 CDS Human protein_coding chr20:4163341 chr20:4163326 synonymous SNV . 0 6 hm5C_associated_SNPs_14117 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:4163307-4163342
64251 chr20 4680566 4680566 1 + C T rs536371371 4680555 + 4680535 4680575 41 GGCCTATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT GGCCTATTACCAGAGAGGATCGAGCATGGTCTTCTTCTCCT < 41bp 1 0.715074383899637 1 0.356078803539276 experiment 0.569851232200725 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4680555 chr20:4680566 nonsynonymous SNV 0.027 1 32 hm5C_associated_SNPs_14118 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:4680537-4680575
64251 chr20 5163049 5163049 1 + A G rs35796695 5163068 + 5163048 5163088 41 TACTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTCTAC TGCTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTCTAC < 41bp 1 0.202222885078084 1 0.0609050095081329 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDS2 ENSG00000101290 CDS Human protein_coding chr20:5163068 chr20:5163049 synonymous SNV . 0 2 hm5C_associated_SNPs_14119 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr20:5163033-5163075
64251 chr20 5172842 5172842 1 + G A rs150430322 5172834 + 5172814 5172854 41 CCTCATTTGTCTCTTTTGTCCCATTGTGGGCATATGGTGGG CCTCATTTGTCTCTTTTGTCCCATTGTGAGCATATGGTGGG < 41bp 1 0.0711114133777605 1 0.0660012364387512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5172834 chr20:5172842 . . 0 29 hm5C_associated_SNPs_14120 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:5172819-5172854
64251 chr20 5172847 5172847 1 + A C rs189261022 5172834 + 5172814 5172854 41 CCTCATTTGTCTCTTTTGTCCCATTGTGGGCATATGGTGGG CCTCATTTGTCTCTTTTGTCCCATTGTGGGCATCTGGTGGG < 41bp 1 0.0938868959310069 1 0.0520029664039612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5172834 chr20:5172847 . . 0 34 hm5C_associated_SNPs_14121 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:5172819-5172854
64251 chr20 5174785 5174785 1 + T A rs531414709 5174797 + 5174777 5174817 41 GCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGG GCTAATACACAGGCAGAGCCCCGTATTCTTCCCTGACTTGG < 41bp 1 0.404591482272788 1 0.131128787994385 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5174797 chr20:5174785 . . 0 9 hm5C_associated_SNPs_14122 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:5174770-5174812
64251 chr20 5931575 5931575 1 + G C rs191935419 5931590 + 5931570 5931610 41 GGGAGGGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCG GGGAGCGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCG < 41bp 1 0.683279674862705 1 0.778488993644714 experiment 0.633440650274589 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931590 chr20:5931575 . . 0 6 hm5C_associated_SNPs_14124 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:5931560-5931586
64251 chr20 5931575 5931575 1 + G C rs191935419 5931595 + 5931575 5931615 41 GGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCGTATCC CGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCGTATCC < 41bp 1 0.384807043539794 1 0.48776850104332 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931595 chr20:5931575 . . 0 1 hm5C_associated_SNPs_14125 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:5931560-5931586
64251 chr20 5931577 5931577 1 + A G rs117380724 5931590 + 5931570 5931610 41 GGGAGGGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCG GGGAGGGGGGGAGGGAGAATCCGGCCGGACAGATCTGCGCG < 41bp 1 0.734682822043 1 0.878186464309692 experiment 0.530634355914001 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931590 chr20:5931577 . . 0 8 hm5C_associated_SNPs_14126 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:5931560-5931586
64251 chr20 5931577 5931577 1 + A G rs117380724 5931595 + 5931575 5931615 41 GGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCGTATCC GGGGGGAGGGAGAATCCGGCCGGACAGATCTGCGCGTATCC < 41bp 1 0.431200210286709 1 0.533194780349731 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931595 chr20:5931577 . . 0 3 hm5C_associated_SNPs_14127 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:5931560-5931586
64251 chr20 5931604 5931604 1 + C G rs371133845 5931590 + 5931570 5931610 41 GGGAGGGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCG GGGAGGGAGGGAGGGAGAATCCGGCCGGACAGATGTGCGCG < 41bp 1 0.678389591481174 1 0.808542490005493 experiment 0.643220817037651 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931590 chr20:5931604 . . 0 35 hm5C_associated_SNPs_14128 0 0 7 DDX24 POSTAR2 ENCODE chr20:5931593-5931651
64251 chr20 5931604 5931604 1 + C G rs371133845 5931595 + 5931575 5931615 41 GGAGGGAGGGAGAATCCGGCCGGACAGATCTGCGCGTATCC GGAGGGAGGGAGAATCCGGCCGGACAGATGTGCGCGTATCC < 41bp 1 0.422362774782789 1 0.662009477615356 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931595 chr20:5931604 . . 0 30 hm5C_associated_SNPs_14129 0 0 7 DDX24 POSTAR2 ENCODE chr20:5931593-5931651
64251 chr20 5932795 5932795 1 + G A rs577098006 5932807 + 5932787 5932827 41 AACCACAGGAAAACGTACTTCTGGTAGGTGAGGTCAATGAT AACCACAGAAAAACGTACTTCTGGTAGGTGAGGTCAATGAT < 41bp 1 0.381454445781477 1 0.349663734436035 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM8 ENSG00000125885 CDS Human protein_coding chr20:5932807 chr20:5932795 nonsynonymous SNV 0.652 0 9 hm5C_associated_SNPs_14130 0 0 7 BUD13 POSTAR2 ENCODE chr20:5932698-5932810
64251 chr20 17550808 17550808 1 + G T rs376638238 17550823 + 17550803 17550843 41 TCGCTGCCCGCCGGCTCCCTCCCCCGCGTCCCTGCGACCGC TCGCTTCCCGCCGGCTCCCTCCCCCGCGTCCCTGCGACCGC < 41bp 1 0.424629101986878 1 0.198182374238968 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSTN ENSG00000125868 UTR5 Human protein_coding chr20:17550823 chr20:17550808 . . 0 6 hm5C_associated_SNPs_14143 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819211 chr20:17550760-17550820
64251 chr20 17970587 17970587 1 + A G rs61749088 17970585 + 17970565 17970605 41 CCTGTGTTTCTTCCTAGGTTCAATGTGGCTTAATTGTGGTG CCTGTGTTTCTTCCTAGGTTCAGTGTGGCTTAATTGTGGTG < 41bp 1 0.454449230994193 1 0.493365675210953 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MGME1 ENSG00000125871 CDS Human protein_coding chr20:17970585 chr20:17970587 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_14144 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr20:17970571-17970600
64251 chr20 18462413 18462413 1 + C T rs4814752 18462420 + 18462400 18462440 41 CAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCT CAATCCAATCATCTCTCCCACAGGTTTGGTCCGGGCACCCT < 41bp 1 0.741280118108454 1 0.458251059055328 experiment 0.517439763783092 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462420 chr20:18462413 nonsynonymous SNV 0.976 1 14 hm5C_associated_SNPs_14146 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:18462319-18462414
64251 chr20 18462421 18462421 1 + A G rs1055171 18462420 + 18462400 18462440 41 CAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCT CAATCCAATCATCCCTCCCACGGGTTTGGTCCGGGCACCCT < 41bp 1 0.789634865428863 1 0.773955404758453 experiment 0.420730269142274 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462420 chr20:18462421 synonymous SNV . 0 22 hm5C_associated_SNPs_14147 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:18462388-18462421
64251 chr20 18462421 18462421 1 + A G rs1055171 18462438 + 18462418 18462458 41 CACAGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTGA CACGGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTGA < 41bp 1 0.311992278702763 1 0.299031794071198 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462438 chr20:18462421 synonymous SNV . 0 4 hm5C_associated_SNPs_14148 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:18462388-18462421
64251 chr20 18462431 18462431 1 + C A rs200897283 18462420 + 18462400 18462440 41 CAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCT CAATCCAATCATCCCTCCCACAGGTTTGGTCAGGGCACCCT < 41bp 1 0.756028301718122 1 0.459072381258011 experiment 0.487943396563757 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462420 chr20:18462431 synonymous SNV . 0 32 hm5C_associated_SNPs_14149 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:18462430-18462469
64251 chr20 18462431 18462431 1 + C A rs200897283 18462438 + 18462418 18462458 41 CACAGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTGA CACAGGTTTGGTCAGGGCACCCTGTGGACTCTGCCCGGTGA < 41bp 1 0.277874355316023 1 0.395755261182785 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462438 chr20:18462431 synonymous SNV . 0 14 hm5C_associated_SNPs_14150 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:18462430-18462469
64251 chr20 18464601 18464601 1 + T A rs538046870 18464621 + 18464601 18464641 41 TTATATCTGGTTCACTACCACCATTTTCTGTTTCCTACTTT ATATATCTGGTTCACTACCACCATTTTCTGTTTCCTACTTT < 41bp 1 0.0514787751371613 1 0.120976656675339 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 UTR3 Human protein_coding chr20:18464621 chr20:18464601 . . 0 1 hm5C_associated_SNPs_14151 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:18464578-18464604
64251 chr20 18464610 18464610 1 + G C rs146172510 18464621 + 18464601 18464641 41 TTATATCTGGTTCACTACCACCATTTTCTGTTTCCTACTTT TTATATCTGCTTCACTACCACCATTTTCTGTTTCCTACTTT < 41bp 1 0.0422496742664879 1 0.0733941197395325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 UTR3 Human protein_coding chr20:18464621 chr20:18464610 . . 0 10 hm5C_associated_SNPs_14152 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:18464586-18464612
64251 chr20 18465001 18465001 1 + C A rs5867 18465002 + 18464982 18465022 41 AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAA AGACTGAATGTTTGTGTGCACCCAGAATTCTAATGTTGAAA < 41bp 1 0.330531795610309 1 0.0561441481113434 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR3F ENSG00000132664 UTR3 Human protein_coding chr20:18465002 chr20:18465001 . . 0 20 hm5C_associated_SNPs_14153 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr20:18464925-18465007
64251 chr20 18465004 18465004 1 + C A rs1133724 18465002 + 18464982 18465022 41 AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAA AGACTGAATGTTTGTGTGCCCCAAGAATTCTAATGTTGAAA < 41bp 1 0.286642186463163 1 0.0937210023403168 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR3F ENSG00000132664 UTR3 Human protein_coding chr20:18465002 chr20:18465004 . . 0 23 hm5C_associated_SNPs_14154 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr20:18464925-18465007
64251 chr20 21284004 21284004 1 + C G rs182718306 21284012 + 21283992 21284032 41 TACGCTCGTCAGCCGGTCGGCCGCCGCCTCCAGCCGTGTGC TACGCTCGTCAGGCGGTCGGCCGCCGCCTCCAGCCGTGTGC < 41bp 1 0.425446660330562 1 0.499219238758087 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XRN2 ENSG00000088930 UTR5 Human protein_coding chr20:21284012 chr20:21284004 . . 0 13 hm5C_associated_SNPs_14159 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:21283984-21284012
64251 chr20 25187724 25187724 1 + G A rs45506395 25187712 + 25187692 25187732 41 CTCTCCCCCCTTCCCACCAGCAGCCGCAGCACGGTCCTTGG CTCTCCCCCCTTCCCACCAGCAGCCGCAGCACAGTCCTTGG < 41bp 1 0.352206762488969 1 0.416556596755981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187712 chr20:25187724 nonsynonymous SNV 0.001 1 33 hm5C_associated_SNPs_14160 0 0 2 DDX3X POSTAR2 ENCODE chr20:25187710-25187728
64251 chr20 25198140 25198140 1 + C T rs145966134 25198155 + 25198135 25198175 41 CAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC CAGGGTACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC < 41bp 1 0.124841955883458 1 0.0970736145973206 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25198155 chr20:25198140 synonymous SNV . 0 6 hm5C_associated_SNPs_14161 0 0 3 GRWD1 POSTAR2 ENCODE chr20:25198137-25198174
64251 chr20 25202734 25202734 1 + G A rs150656603 25202754 + 25202734 25202774 41 GCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCA ACAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCA < 41bp 1 0.274090005203887 1 0.133333474397659 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 intronic Human protein_coding chr20:25202754 chr20:25202734 . . 0 1 hm5C_associated_SNPs_14162 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:25202727-25202739
64251 chr20 25202763 25202763 1 + G A rs576337370 25202754 + 25202734 25202774 41 GCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCA GCAGATCTGAAGCAGCAGCACCCCAGGCCACACAAGCAGCA < 41bp 1 0.28540006428604 1 0.0997558534145355 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 intronic Human protein_coding chr20:25202754 chr20:25202763 . . 0 30 hm5C_associated_SNPs_14163 0 0 1 RBM5 POSTAR2 ENCODE chr20:25202713-25202763
64251 chr20 30157026 30157026 1 + A G rs4607 30157025 + 30157005 30157045 41 GAGAAGAAAGAGAAATGATGCAGCTGGTGCCCGAGCCTCTC GAGAAGAAAGAGAAATGATGCGGCTGGTGCCCGAGCCTCTC < 41bp 1 0.735607015460173 1 0.784740328788757 experiment 0.528785969079655 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HM13-AS1 ENSG00000230613 ncRNA_intronic Human antisense chr20:30157025 chr20:30157026 . . 0 22 hm5C_associated_SNPs_14165 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:30156912-30157035
64251 chr20 30157045 30157045 1 + C G rs552541919 30157025 + 30157005 30157045 41 GAGAAGAAAGAGAAATGATGCAGCTGGTGCCCGAGCCTCTC GAGAAGAAAGAGAAATGATGCAGCTGGTGCCCGAGCCTCTG < 41bp 1 0.687447815995142 1 0.491475224494934 experiment 0.625104368009716 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HM13-AS1 ENSG00000230613 ncRNA_intronic Human antisense chr20:30157025 chr20:30157045 . . 0 41 hm5C_associated_SNPs_14166 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:30157010-30157048
64251 chr20 30194070 30194070 1 + A T rs184161698 30194079 + 30194059 30194099 41 AGGCACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTAC AGGCACTGGCGTGGAGAGGGCGCTCCTCTCTGCACACCTAC < 41bp 1 0.489811713768595 1 0.233965694904327 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30194079 chr20:30194070 . . 0 12 hm5C_associated_SNPs_14167 0 0 5 LIN28B POSTAR2 ENCODE chr20:30194041-30194101
64251 chr20 30194070 30194070 1 + A T rs184161698 30194083 + 30194063 30194103 41 ACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTACTAGT ACTGGCGTGGAGAGGGCGCTCCTCTCTGCACACCTACTAGT < 41bp 1 0.376860506977964 1 0.139819711446762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30194083 chr20:30194070 . . 0 8 hm5C_associated_SNPs_14168 0 0 5 LIN28B POSTAR2 ENCODE chr20:30194041-30194101
64251 chr20 30194098 30194098 1 + A G rs548388201 30194079 + 30194059 30194099 41 AGGCACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTAC AGGCACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTGC < 41bp 1 0.496152783921633 1 0.326176941394806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30194079 chr20:30194098 . . 0 40 hm5C_associated_SNPs_14169 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:30194074-30194118
64251 chr20 30194098 30194098 1 + A G rs548388201 30194083 + 30194063 30194103 41 ACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTACTAGT ACTGGCGAGGAGAGGGCGCTCCTCTCTGCACACCTGCTAGT < 41bp 1 0.413175322161202 1 0.13146910071373 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30194083 chr20:30194098 . . 0 36 hm5C_associated_SNPs_14170 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:30194074-30194118
64251 chr20 30381758 30381758 1 + G A rs1062794 30381750 + 30381730 30381770 41 CAAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGA CAAGAACTGTGGAAATATGCCCTTTCTCATTTGATTCTCGA < 41bp 1 0.022155131712374 1 0.0439035594463348 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381750 chr20:30381758 synonymous SNV . 0 29 hm5C_associated_SNPs_14171 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr20 30381758 30381758 1 + G A rs1062794 30381751 + 30381731 30381771 41 AAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGAG AAGAACTGTGGAAATATGCCCTTTCTCATTTGATTCTCGAG < 41bp 1 0.0253673106796956 1 0.0514507293701172 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381751 chr20:30381758 synonymous SNV . 0 28 hm5C_associated_SNPs_14172 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr20 30824059 30824059 1 + G C rs560263635 30824043 + 30824023 30824063 41 GCCACCACTAGGTTGTAAGCCTGTAGCTGGCTGGCTGATTT GCCACCACTAGGTTGTAAGCCTGTAGCTGGCTGGCTCATTT < 41bp 1 0.698642903889419 1 0.41394454240799 experiment 0.602714192221162 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30824043 chr20:30824059 . . 0 37 hm5C_associated_SNPs_14178 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr20:30824017-30824059
64251 chr20 30824599 30824599 1 + T C rs140363751 30824580 + 30824560 30824600 41 CGTCACCTCCATGCCAGGCACTGTGCTTGCTAATTGCTTTA CGTCACCTCCATGCCAGGCACTGTGCTTGCTAATTGCTTCA < 41bp 1 0.329877221354689 1 0.0730423927307129 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POFUT1 ENSG00000101346 UTR3 Human protein_coding chr20:30824580 chr20:30824599 . . 0 40 hm5C_associated_SNPs_14179 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378376 chr20:30824580-30824600
64251 chr20 30946482 30946482 1 + C A rs570751501 30946499 + 30946479 30946519 41 GCCCCCCCCACCGCCGCCGCCGCCCCAGCCCCGCGCCACCG GCCACCCCCACCGCCGCCGCCGCCCCAGCCCCGCGCCACCG < 41bp 1 0.545277720992271 1 0.264141738414764 experiment 0.909444558015458 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ASXL1 ENSG00000171456 UTR5 Human protein_coding chr20:30946499 chr20:30946482 . . 0 4 hm5C_associated_SNPs_14180 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:30946421-30946501
64251 chr20 30946486 30946486 1 + C A rs534633106 30946499 + 30946479 30946519 41 GCCCCCCCCACCGCCGCCGCCGCCCCAGCCCCGCGCCACCG GCCCCCCACACCGCCGCCGCCGCCCCAGCCCCGCGCCACCG < 41bp 1 0.56016624153487 1 0.29874861240387 experiment 0.879667516930259 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ASXL1 ENSG00000171456 UTR5 Human protein_coding chr20:30946499 chr20:30946486 . . 0 8 hm5C_associated_SNPs_14181 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:30946421-30946501
64251 chr20 30946486 30946486 1 + C A rs534633106 30946503 + 30946483 30946523 41 CCCCCACCGCCGCCGCCGCCCCAGCCCCGCGCCACCGCCCC CCCACACCGCCGCCGCCGCCCCAGCCCCGCGCCACCGCCCC < 41bp 1 0.501006813017943 1 0.238633811473846 experiment 0.997986373964114 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ASXL1 ENSG00000171456 UTR5 Human protein_coding chr20:30946503 chr20:30946486 . . 0 4 hm5C_associated_SNPs_14182 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:30946421-30946501
64251 chr20 31021430 31021430 1 + G C rs141346625 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCCGACCTGCAGGGTCCCGAATTCCCAGTTGAGTCT < 41bp 1 0.551086684954266 1 0.177950114011765 experiment 0.897826630091468 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021430 nonsynonymous SNV 0.007 1 15 hm5C_associated_SNPs_14183 1 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31021430 31021430 1 + G C rs141346625 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCCGACCTGCAGGGTCCCGAATTCCCAGTTGAGTCTG < 41bp 1 0.492557458773821 1 0.270046412944794 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021430 nonsynonymous SNV 0.007 1 14 hm5C_associated_SNPs_14184 1 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31024488 31024488 1 + C T rs6057581 31024479 + 31024459 31024499 41 AGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAG AGCGCCCCAGGCCTGCGGACCCGATGCCTTTTCCTGCTGAG < 41bp 1 0.0946572877706167 1 0.35127454996109 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024479 chr20:31024488 nonsynonymous SNV 0.246 2 30 hm5C_associated_SNPs_14185 2 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:31024458-31024492
64251 chr20 31025163 31025163 1 + A G rs2295764 31025162 + 31025142 31025182 41 TAAATTATGGCCATGGGAAACATTGTATATTTAGTGTGTGT TAAATTATGGCCATGGGAAACGTTGTATATTTAGTGTGTGT < 41bp 1 0.0547027406921344 1 0.151070445775986 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 UTR3 Human protein_coding chr20:31025162 chr20:31025163 . . 0 22 hm5C_associated_SNPs_14186 1 0 22 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:31024999-31025165
64251 chr20 32441602 32441602 1 + T C rs187600351 32441589 + 32441569 32441609 41 GGCGGGGTGGGAAGTGCCTGCTGTTTATAATGTTGAATTTC GGCGGGGTGGGAAGTGCCTGCTGTTTATAATGTCGAATTTC < 41bp 1 0.334616395121613 1 0.283725470304489 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441589 chr20:32441602 . . 0 34 hm5C_associated_SNPs_14189 0 0 35 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:32441580-32441660
64251 chr20 33515537 33515537 1 + G A rs201877071 33515519 + 33515499 33515539 41 CAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTA CAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTATA < 41bp 1 0.0443352485680227 1 0.0818024873733521 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACSS2 ENSG00000131069 UTR3 Human protein_coding chr20:33515519 chr20:33515537 . . 0 39 hm5C_associated_SNPs_14190 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:33515531-33515554
64251 chr20 34079058 34079058 1 + G T rs145916875 34079073 + 34079053 34079093 41 GAGAAGGAGAGAGTATCCCTCCTGGAGACACTGCTGCAGAC GAGAATGAGAGAGTATCCCTCCTGGAGACACTGCTGCAGAC < 41bp 1 0.182054545051612 1 0.736310124397278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP250 ENSG00000126001 CDS Human protein_coding chr20:34079073 chr20:34079058 nonsynonymous SNV 0.999 1 6 hm5C_associated_SNPs_14191 0 0 8 BUD13 POSTAR2 ENCODE chr20:34079033-34079146
64251 chr20 34288854 34288854 1 + C T rs3088078 34288867 + 34288847 34288887 41 TCTGTCCCTTCCCATCAATCCCAGCCCATGTACTAATAAAA TCTGTCCTTTCCCATCAATCCCAGCCCATGTACTAATAAAA < 41bp 1 0.166428515996114 1 0.107406735420227 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ROMO1 ENSG00000125995 UTR3 Human protein_coding chr20:34288867 chr20:34288854 . . 0 8 hm5C_associated_SNPs_14193 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:34288757-34288880
64251 chr20 34288854 34288854 1 + C T rs3088078 34288868 + 34288848 34288888 41 CTGTCCCTTCCCATCAATCCCAGCCCATGTACTAATAAAAG CTGTCCTTTCCCATCAATCCCAGCCCATGTACTAATAAAAG < 41bp 1 0.288158223772416 1 0.0954107344150543 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ROMO1 ENSG00000125995 UTR3 Human protein_coding chr20:34288868 chr20:34288854 . . 0 7 hm5C_associated_SNPs_14194 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:34288757-34288880
64251 chr20 34288871 34288871 1 + C T rs148571469 34288867 + 34288847 34288887 41 TCTGTCCCTTCCCATCAATCCCAGCCCATGTACTAATAAAA TCTGTCCCTTCCCATCAATCCCAGTCCATGTACTAATAAAA < 41bp 1 0.193880806523905 1 0.232634633779526 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ROMO1 ENSG00000125995 UTR3 Human protein_coding chr20:34288867 chr20:34288871 . . 0 25 hm5C_associated_SNPs_14195 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:34288757-34288880
64251 chr20 34288871 34288871 1 + C T rs148571469 34288868 + 34288848 34288888 41 CTGTCCCTTCCCATCAATCCCAGCCCATGTACTAATAAAAG CTGTCCCTTCCCATCAATCCCAGTCCATGTACTAATAAAAG < 41bp 1 0.168888308087544 1 0.292150616645813 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ROMO1 ENSG00000125995 UTR3 Human protein_coding chr20:34288868 chr20:34288871 . . 0 24 hm5C_associated_SNPs_14196 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:34288757-34288880
64251 chr20 34817343 34817343 1 + C T rs200564466 34817342 + 34817322 34817362 41 GGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCC GGGCCTTCATTCTGGATTCTCTGACGCAACACTGACGTCCC < 41bp 1 0.357451405114998 1 0.654270887374878 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPB41L1 ENSG00000088367 UTR3 Human protein_coding chr20:34817342 chr20:34817343 . . 0 22 hm5C_associated_SNPs_14197 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34817324-34817355
64251 chr20 34843689 34843689 1 + C T rs6060875 34843697 + 34843677 34843717 41 CGCTCTCAGCTGCGAGGGGCCCCTTCCCACAGGGCTGCAGT CGCTCTCAGCTGTGAGGGGCCCCTTCCCACAGGGCTGCAGT < 41bp 1 0.0760434999894436 1 0.0771999359130859 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AAR2 ENSG00000131043 UTR3 Human protein_coding chr20:34843697 chr20:34843689 . . 0 13 hm5C_associated_SNPs_14199 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34843688-34843715
64251 chr20 35177688 35177688 1 + G A rs200649093 35177698 + 35177678 35177718 41 GCCCCCGCCAGTCACCCCTCCCCGCACACACCCGTCCATAC GCCCCCGCCAATCACCCCTCCCCGCACACACCCGTCCATAC < 41bp 1 0.3139054534447 1 0.318199992179871 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DLGAP4-AS1 ENSG00000259716 ncRNA_exonic Human other chr20:35177698 chr20:35177688 . . 0 11 hm5C_associated_SNPs_14201 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163974 chr20:35177687-35177688
64251 chr20 35220485 35220485 1 + C G rs6101371 35220494 + 35220474 35220514 41 AATATTTTTATCTTGGGGACCAGCTAAGTCTCTGCAGTAGT AATATTTTTATGTTGGGGACCAGCTAAGTCTCTGCAGTAGT < 41bp 1 0.0781405821777622 1 0.386476874351501 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGIF2 ENSG00000259716 ncRNA_intronic Human other chr20:35220494 chr20:35220485 . . 0 12 hm5C_associated_SNPs_14203 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr20:35220359-35220540
64251 chr20 35857284 35857284 1 + T C rs73293748 35857281 + 35857261 35857301 41 AATAAGCTTGGGAGGTGAGGCACTGTGTGCAGTCTCCATAA AATAAGCTTGGGAGGTGAGGCACCGTGTGCAGTCTCCATAA < 41bp 1 0.682290931939663 1 0.329100966453552 experiment 0.635418136120674 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPN2 ENSG00000118705 intronic Human protein_coding chr20:35857281 chr20:35857284 . . 0 24 hm5C_associated_SNPs_14204 0 0 1 RBM22 POSTAR2 ENCODE chr20:35857210-35857335
64251 chr20 35944886 35944886 1 + A C rs551454296 35944904 + 35944884 35944924 41 ACATTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAG ACCTTGTGTTCCCCCGCATTCCAGGCTCAGGGTCTGAGGAG < 41bp 1 0.689327012450402 1 0.70491623878479 experiment 0.621345975099196 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MANBAL ENSG00000101363 UTR3 Human protein_coding chr20:35944904 chr20:35944886 . . 0 3 hm5C_associated_SNPs_14205 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35944859-35944886
64251 chr20 35945494 35945494 1 + G A rs151295793 35945500 + 35945480 35945520 41 AGCCTCTGAAATGGGAGGCTCGTCAATTTCAGACCAACCTC AGCCTCTGAAATGGAAGGCTCGTCAATTTCAGACCAACCTC < 41bp 1 0.507695994058163 1 0.0903094410896301 experiment 0.984608011883674 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MANBAL ENSG00000101363 UTR3 Human protein_coding chr20:35945500 chr20:35945494 . . 0 15 hm5C_associated_SNPs_14206 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:35945449-35945543
64251 chr20 36032926 36032926 1 + C T rs550839164 36032938 + 36032918 36032958 41 TTCTCCTCCCCAAGTCGGCACCCTTTAACTCATGAGGAGGG TTCTCCTCTCCAAGTCGGCACCCTTTAACTCATGAGGAGGG < 41bp 1 0.0307727475031574 1 0.135890126228333 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRC ENSG00000197122 UTR3 Human protein_coding chr20:36032938 chr20:36032926 . . 0 9 hm5C_associated_SNPs_14207 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:36032917-36032951
64251 chr20 36033222 36033222 1 + G A rs550802233 36033210 + 36033190 36033230 41 TTGGGTGTGTGGTGGATTCTCCCTGGGCCTCAGTGTGCCCA TTGGGTGTGTGGTGGATTCTCCCTGGGCCTCAATGTGCCCA < 41bp 1 0.412261975854082 1 0.309039950370789 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SRC ENSG00000197122 UTR3 Human protein_coding chr20:36033210 chr20:36033222 . . 0 33 hm5C_associated_SNPs_14208 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:36033222-36033248
64251 chr20 37076726 37076726 1 + C T rs76979192 37076732 + 37076712 37076752 41 TTTGCTCTTTTCTGCGCCTGCATTCGTAAGTGATCACGGGC TTTGCTCTTTTCTGTGCCTGCATTCGTAAGTGATCACGGGC < 41bp 1 0.0394674257367434 1 0.0497991442680359 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA71E ENSG00000174365 ncRNA_exonic Human processed_transcript chr20:37076732 chr20:37076726 . . 0 15 hm5C_associated_SNPs_14211 0 0 4 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr20:37076720-37076740
64251 chr20 37144944 37144944 1 + C T rs556665696 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC GCAAGAATTGAATCAGTATCCCTGCTTTAAACATCTGCCTC < 41bp 1 0.175322819182005 1 0.254383504390717 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144944 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_14212 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:37144935-37144960
64251 chr20 37570725 37570725 1 + C T rs3752293 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCTCAATTTTTGGATATGTGCATGGATCTGAAAGTTCATCC < 41bp 1 0.441508885795532 1 0.0714190006256104 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570725 synonymous SNV . 0 10 hm5C_associated_SNPs_14213 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr20:37570686-37570726
64251 chr20 37580948 37580948 1 + C A rs182339227 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT TGGGCACCCCCAACCTGGAACTGTACTTGAGTGACTCACTT < 41bp 1 0.292428428425708 1 0.140103191137314 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580948 nonsynonymous SNV 0.636 1 12 hm5C_associated_SNPs_14214 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr20 37632424 37632424 1 + C T rs140757763 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTTGTGTCGATGCTCATTGAGCAGGCTCGAGCACT < 41bp 1 0.174148464623581 1 0.0164184868335724 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632424 synonymous SNV . 0 24 hm5C_associated_SNPs_14215 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:37632381-37632471
64251 chr20 39797465 39797465 1 + T C rs753381 39797451 + 39797431 39797471 41 TACAAGGCCCAGAGGGAGGACGAGCTGACCTTCATCAAGAG TACAAGGCCCAGAGGGAGGACGAGCTGACCTTCACCAAGAG < 41bp 1 0.292445570560238 1 0.685719966888428 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39797451 chr20:39797465 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_14216 0 1 4 DDX24 POSTAR2 ENCODE chr20:39797447-39797509
64251 chr20 39798794 39798794 1 + C A rs560952244 39798792 + 39798772 39798812 41 AACAACCGGCTCTTCGTCTTCTCCATCAGCATGGCGTCGGT AACAACCGGCTCTTCGTCTTCTACATCAGCATGGCGTCGGT < 41bp 1 0.753829446456009 1 0.872640132904053 experiment 0.492341107087981 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39798792 chr20:39798794 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_14217 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39798783-39798794
64251 chr20 39802814 39802814 1 + G T rs33917926 39802812 + 39802792 39802832 41 GTGGTACGTCCCTGCGGGAGCGGGGCTCAGATGCCTCAGGC GTGGTACGTCCCTGCGGGAGCGTGGCTCAGATGCCTCAGGC < 41bp 1 0.582771274310048 1 0.574688017368317 experiment 0.834457451379904 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39802812 chr20:39802814 synonymous SNV . 0 23 hm5C_associated_SNPs_14218 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:39802788-39802817
64251 chr20 39977786 39977786 1 + G A rs75791892 39977802 + 39977782 39977822 41 ACTCGGATGGCGAGTGGCCCCCCCAGGCCAGGTAAGAGTCC ACTCAGATGGCGAGTGGCCCCCCCAGGCCAGGTAAGAGTCC < 41bp 1 0.55776631560111 1 0.430325567722321 experiment 0.884467368797779 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39977802 chr20:39977786 synonymous SNV . 0 5 hm5C_associated_SNPs_14219 0 0 4 DDX24 POSTAR2 ENCODE chr20:39977764-39977813
64251 chr20 39987612 39987612 1 + G A rs74974231 39987629 + 39987609 39987649 41 GAAGGGGAAGGAGGAGGCTGCAGGTTGGTTGGCAGCTAGAG GAAAGGGAAGGAGGAGGCTGCAGGTTGGTTGGCAGCTAGAG < 41bp 1 0.557581088426456 1 0.372860133647919 experiment 0.884837823147087 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LPIN3 ENSG00000132793 UTR3 Human protein_coding chr20:39987629 chr20:39987612 . . 0 4 hm5C_associated_SNPs_14220 0 0 1 LSM11 POSTAR2 ENCODE chr20:39987587-39987647
64251 chr20 42169589 42169589 1 + G A rs76363655 42169585 + 42169565 42169605 41 CCCCACCAGGCAAGAATAGTCAGAGTGACCCATGTATCTGG CCCCACCAGGCAAGAATAGTCAGAATGACCCATGTATCTGG < 41bp 1 0.788243367605842 1 0.867765724658966 experiment 0.423513264788316 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169585 chr20:42169589 nonsynonymous SNV 0.191 1 25 hm5C_associated_SNPs_14221 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:42169585-42169615
64251 chr20 42343777 42343777 1 + A G rs191418662 42343775 + 42343755 42343795 41 GACTTGGTTTTGGTTTCAGCCGACAACTGCCCCTTCAAACT GACTTGGTTTTGGTTTCAGCCGGCAACTGCCCCTTCAAACT < 41bp 1 0.699735887234625 1 0.89864718914032 experiment 0.60052822553075 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42343775 chr20:42343777 nonsynonymous SNV 0.013 0 23 hm5C_associated_SNPs_14222 0 0 15 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:42343760-42343780
64251 chr20 42344978 42344978 1 + G A rs536904172 42344961 + 42344941 42344981 41 ACTTCCAGGTCTGCCTGGTTCCCTCCCCAAGGCCACAGGGA ACTTCCAGGTCTGCCTGGTTCCCTCCCCAAGGCCACAAGGA < 41bp 1 0.13425447118849 1 0.0443129539489746 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 UTR3 Human protein_coding chr20:42344961 chr20:42344978 . . 0 38 hm5C_associated_SNPs_14223 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:42344934-42345121
64251 chr20 42695404 42695404 1 + C T rs149010935 42695411 + 42695391 42695431 41 TTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAA TTCCCCAGCAGCTTGGGATCCTGCTCACCTGGCCCATCCAA < 41bp 1 0.426803837030596 1 0.136575073003769 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695411 chr20:42695404 nonsynonymous SNV 0.573 0 14 hm5C_associated_SNPs_14224 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr20 43356156 43356156 1 + C T rs1061098 43356149 + 43356129 43356169 41 GTATGGCAGAGGTGCAAGACCTAGTCCCCTTTCCTCTAACT GTATGGCAGAGGTGCAAGACCTAGTCCTCTTTCCTCTAACT < 41bp 1 0.457067375605486 1 0.0471051931381226 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control KCNK15-AS1 ENSG00000244558 ncRNA_intronic Human antisense chr20:43356149 chr20:43356156 . . 0 28 hm5C_associated_SNPs_14227 0 1 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr20:43356148-43356169
64251 chr20 43530403 43530403 1 + A C rs142757633 43530409 + 43530389 43530429 41 AGAGGAATGAGAAGAAGCAGCAGATGGGCAAAGAGTACCGT AGAGGAATGAGAAGCAGCAGCAGATGGGCAAAGAGTACCGT < 41bp 1 0.628504413326908 1 0.637706577777863 experiment 0.742991173346185 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout YWHAB ENSG00000166913 CDS Human protein_coding chr20:43530409 chr20:43530403 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_14228 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:43530331-43530406
64251 chr20 43535101 43535101 1 + T C rs6876 43535105 + 43535085 43535125 41 CTCGTGCTTTGTGATCTGTTCAGTGTCACTCTGTACCCTCA CTCGTGCTTTGTGATCCGTTCAGTGTCACTCTGTACCCTCA < 41bp 1 0.493354321020426 1 0.340348154306412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YWHAB ENSG00000166913 UTR3 Human protein_coding chr20:43535105 chr20:43535101 . . 0 17 hm5C_associated_SNPs_14229 0 0 38 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:43535067-43535151
64251 chr20 44035237 44035237 1 + G A rs541042573 44035253 + 44035233 44035273 41 TCCCGGCTCCCAGGGCCCGTCGGTCCCCCGGGAGCCCTGGA TCCCAGCTCCCAGGGCCCGTCGGTCCCCCGGGAGCCCTGGA < 41bp 1 0.340977724236444 1 0.845628023147583 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44035253 chr20:44035237 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_14230 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr20:44035220-44035251
64251 chr20 44050050 44050050 1 + C T rs146896700 44050042 + 44050022 44050062 41 GAGGCCCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACGT GAGGCCCCCCCAGTGCCCTTCCTGCATGTCCAGCGGTACGT < 41bp 1 0.121685914047061 1 0.0529753267765045 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44050042 chr20:44050050 nonsynonymous SNV 0.990 3 29 hm5C_associated_SNPs_14231 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44050025-44050054
64251 chr20 44050061 44050061 1 + G A rs370184382 44050042 + 44050022 44050062 41 GAGGCCCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACGT GAGGCCCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACAT < 41bp 1 0.131362828726227 1 0.0526649653911591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44050042 chr20:44050061 nonsynonymous SNV 0.949 4 40 hm5C_associated_SNPs_14232 0 0 3 RPS3 POSTAR2 ENCODE chr20:44050025-44050086
64251 chr20 44513048 44513048 1 + C T rs150692129 44513043 + 44513023 44513063 41 AAGGAGTCTGTCTCCGTCACCCAGGCTGGAGTGCAGTGGCG AAGGAGTCTGTCTCCGTCACCCAGGTTGGAGTGCAGTGGCG < 41bp 1 0.470840204577555 1 0.434581935405731 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513043 chr20:44513048 . . 0 26 hm5C_associated_SNPs_14235 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513028-44513053
64251 chr20 44513048 44513048 1 + C T rs150692129 44513044 + 44513024 44513064 41 AGGAGTCTGTCTCCGTCACCCAGGCTGGAGTGCAGTGGCGC AGGAGTCTGTCTCCGTCACCCAGGTTGGAGTGCAGTGGCGC < 41bp 1 0.704042222441649 1 0.837359428405762 experiment 0.591915555116702 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513044 chr20:44513048 . . 0 25 hm5C_associated_SNPs_14236 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513028-44513053
64251 chr20 44513048 44513048 1 + C T rs150692129 44513056 + 44513036 44513076 41 CCGTCACCCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCA CCGTCACCCAGGTTGGAGTGCAGTGGCGCAATCTCTGCTCA < 41bp 1 0.679595711383033 1 0.418041706085205 experiment 0.640808577233933 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513056 chr20:44513048 . . 0 13 hm5C_associated_SNPs_14237 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513028-44513053
64251 chr20 44513289 44513289 1 + T C rs6094223 44513280 + 44513260 44513300 41 CAAAGTGCTGGGATTACAGGCGTGAGCCATCGCACCCGGCC CAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCC < 41bp 1 0.795192281126156 1 0.526641845703125 experiment 0.409615437747688 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513280 chr20:44513289 . . 0 30 hm5C_associated_SNPs_14241 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr20:44513280-44513320
64251 chr20 44513289 44513289 1 + T C rs6094223 44513286 + 44513266 44513306 41 GCTGGGATTACAGGCGTGAGCCATCGCACCCGGCCTGTTTT GCTGGGATTACAGGCGTGAGCCACCGCACCCGGCCTGTTTT < 41bp 1 0.416522478969735 1 0.0994735360145569 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513286 chr20:44513289 . . 0 24 hm5C_associated_SNPs_14242 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr20:44513280-44513320
64251 chr20 44513289 44513289 1 + T C rs6094223 44513287 + 44513267 44513307 41 CTGGGATTACAGGCGTGAGCCATCGCACCCGGCCTGTTTTA CTGGGATTACAGGCGTGAGCCACCGCACCCGGCCTGTTTTA < 41bp 1 0.698158023045219 1 0.758675158023834 experiment 0.603683953909561 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513287 chr20:44513289 . . 0 23 hm5C_associated_SNPs_14243 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr20:44513280-44513320
64251 chr20 44513289 44513289 1 + T C rs6094223 44513290 + 44513270 44513310 41 GGATTACAGGCGTGAGCCATCGCACCCGGCCTGTTTTAACA GGATTACAGGCGTGAGCCACCGCACCCGGCCTGTTTTAACA < 41bp 1 0.489424205932054 1 0.638962864875793 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513290 chr20:44513289 . . 0 20 hm5C_associated_SNPs_14244 0 0 1 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr20:44513280-44513320
64251 chr20 44513624 44513624 1 + A G rs73308375 44513612 + 44513592 44513632 41 AGTAGGCCAAGATCCTGCTGCCACTGCACTCCAGCCTGGGA AGTAGGCCAAGATCCTGCTGCCACTGCACTCCGGCCTGGGA < 41bp 1 0.26628393953344 1 0.0796193778514862 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513612 chr20:44513624 . . 0 33 hm5C_associated_SNPs_14245 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513613 + 44513593 44513633 41 GTAGGCCAAGATCCTGCTGCCACTGCACTCCAGCCTGGGAG GTAGGCCAAGATCCTGCTGCCACTGCACTCCGGCCTGGGAG < 41bp 1 0.537735518172878 1 0.114196598529816 experiment 0.924528963654245 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513613 chr20:44513624 . . 0 32 hm5C_associated_SNPs_14246 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513618 + 44513598 44513638 41 CCAAGATCCTGCTGCCACTGCACTCCAGCCTGGGAGGGTGA CCAAGATCCTGCTGCCACTGCACTCCGGCCTGGGAGGGTGA < 41bp 1 0.257612975473522 1 0.129730731248856 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513618 chr20:44513624 . . 0 27 hm5C_associated_SNPs_14247 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513620 + 44513600 44513640 41 AAGATCCTGCTGCCACTGCACTCCAGCCTGGGAGGGTGAGA AAGATCCTGCTGCCACTGCACTCCGGCCTGGGAGGGTGAGA < 41bp 1 0.55089269865963 1 0.517090499401093 experiment 0.898214602680739 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513620 chr20:44513624 . . 0 25 hm5C_associated_SNPs_14248 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513622 + 44513602 44513642 41 GATCCTGCTGCCACTGCACTCCAGCCTGGGAGGGTGAGACT GATCCTGCTGCCACTGCACTCCGGCCTGGGAGGGTGAGACT < 41bp 1 0.571992934415059 1 0.746663510799408 experiment 0.856014131169881 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513622 chr20:44513624 . . 0 23 hm5C_associated_SNPs_14249 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513623 + 44513603 44513643 41 ATCCTGCTGCCACTGCACTCCAGCCTGGGAGGGTGAGACTC ATCCTGCTGCCACTGCACTCCGGCCTGGGAGGGTGAGACTC < 41bp 1 0.502444735482184 1 0.78401792049408 experiment 0.995110529035632 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513623 chr20:44513624 . . 0 22 hm5C_associated_SNPs_14250 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513626 + 44513606 44513646 41 CTGCTGCCACTGCACTCCAGCCTGGGAGGGTGAGACTCCAT CTGCTGCCACTGCACTCCGGCCTGGGAGGGTGAGACTCCAT < 41bp 1 0.369249171001034 1 0.353350281715393 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513626 chr20:44513624 . . 0 19 hm5C_associated_SNPs_14251 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 44513624 44513624 1 + A G rs73308375 44513627 + 44513607 44513647 41 TGCTGCCACTGCACTCCAGCCTGGGAGGGTGAGACTCCATC TGCTGCCACTGCACTCCGGCCTGGGAGGGTGAGACTCCATC < 41bp 1 0.707352096482386 1 0.269298553466797 experiment 0.585295807035228 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSWIM1 ENSG00000168612 UTR3 Human protein_coding chr20:44513627 chr20:44513624 . . 0 18 hm5C_associated_SNPs_14252 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:44513600-44513637
64251 chr20 45817255 45817255 1 + A C rs1046667 45817258 + 45817238 45817278 41 TCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGG TCTAATGTAAGCACTCTCTTCTCCAAGTTGTGCTTTGTGGG < 41bp 1 0.461101087698262 1 0.931976914405823 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EYA2 ENSG00000064655 UTR3 Human protein_coding chr20:45817258 chr20:45817255 . . 0 18 hm5C_associated_SNPs_14255 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:45817234-45817259
64251 chr20 47895196 47895196 1 + C T rs188154930 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGTCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG < 41bp 1 0.0604302826652249 1 0.0891728699207306 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895196 . . 0 7 hm5C_associated_SNPs_14259 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47895184-47895201
64251 chr20 47895197 47895197 1 + C A rs479474 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCACGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG < 41bp 1 0.0737985630845806 1 0.0692265927791595 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895197 . . 0 8 hm5C_associated_SNPs_14260 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47895184-47895201
64251 chr20 47895198 47895198 1 + C G rs479473 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCCGGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG < 41bp 1 0.0795183926062815 1 0.0940778851509094 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895198 . . 0 9 hm5C_associated_SNPs_14261 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47895184-47895201
64251 chr20 47895201 47895201 1 + A G rs28362648 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCCCGGGGTGTGGTACTTCTCCTAGTTGCAGTCAGG < 41bp 1 0.0770312137606593 1 0.122182220220566 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895201 . . 0 12 hm5C_associated_SNPs_14262 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47895184-47895201
64251 chr20 47895215 47895215 1 + C A rs3818070 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCCCGGAGTGTGGTACTTCTACTAGTTGCAGTCAGG < 41bp 1 0.0747391348362042 1 0.0978684723377228 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895215 . . 0 26 hm5C_associated_SNPs_14263 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:47895180-47895220
64251 chr20 47895218 47895218 1 + A C rs3818071 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCCCGGAGTGTGGTACTTCTCCTCGTTGCAGTCAGG < 41bp 1 0.0692823526746268 1 0.116660267114639 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895218 . . 0 29 hm5C_associated_SNPs_14264 0 0 31 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:47895180-47895220
64251 chr20 47895559 47895559 1 + C T rs140365533 47895553 + 47895533 47895573 41 TTATATTTTGCCAGTTAGTTCTGATACATCGGCCTCAAAAG TTATATTTTGCCAGTTAGTTCTGATATATCGGCCTCAAAAG < 41bp 1 0.379180065976571 1 0.0841898322105408 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895553 chr20:47895559 . . 0 27 hm5C_associated_SNPs_14265 0 0 10 FBL POSTAR2 GSE43666,GSM1067864 chr20:47895470-47895562
64251 chr20 47896907 47896907 1 + A C rs116993790 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGC < 41bp 1 0.0651505394204513 1 0.0899316370487213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896907 . . 0 41 hm5C_associated_SNPs_14266 0 0 116 PTBP1 POSTAR2 GSE19323,GSM480477 chr20:47896900-47896920
64251 chr20 47896907 47896907 1 + A C rs116993790 47896899 + 47896879 47896919 41 TTTTTTCCCCGACAGATCGACTATGTTGATCTAACTTTTCT TTTTTTCCCCGACAGATCGACTATGTTGCTCTAACTTTTCT < 41bp 1 0.124669224516164 1 0.0930370092391968 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896899 chr20:47896907 . . 0 29 hm5C_associated_SNPs_14267 0 0 116 PTBP1 POSTAR2 GSE19323,GSM480477 chr20:47896900-47896920
64251 chr20 47896907 47896907 1 + A C rs116993790 47896909 + 47896889 47896929 41 GACAGATCGACTATGTTGATCTAACTTTTCTAAGCCAGTTT GACAGATCGACTATGTTGCTCTAACTTTTCTAAGCCAGTTT < 41bp 1 0.0873736562070679 1 0.0832721889019012 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896909 chr20:47896907 . . 0 19 hm5C_associated_SNPs_14268 0 0 116 PTBP1 POSTAR2 GSE19323,GSM480477 chr20:47896900-47896920
64251 chr20 49126926 49126926 1 + A C rs377261839 49126935 + 49126915 49126955 41 TTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTG TTGACATGAAGCAGCAGCAGCGGCTAGGGCGGCGGTAGCTG < 41bp 1 0.672292597287662 1 0.208720952272415 experiment 0.655414805424675 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN1 ENSG00000196396 UTR5 Human protein_coding chr20:49126935 chr20:49126926 . . 0 12 hm5C_associated_SNPs_14269 0 0 6 DDX3X POSTAR2 ENCODE chr20:49126924-49126999
64251 chr20 49126938 49126938 1 + C G rs566385652 49126935 + 49126915 49126955 41 TTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTG TTGACATGAAGAAGCAGCAGCGGGTAGGGCGGCGGTAGCTG < 41bp 1 0.797547574218615 1 0.522163987159729 experiment 0.404904851562771 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN1 ENSG00000196396 UTR5 Human protein_coding chr20:49126935 chr20:49126938 . . 0 24 hm5C_associated_SNPs_14270 0 0 9 DDX3X POSTAR2 ENCODE chr20:49126927-49127122
64251 chr20 49126945 49126945 1 + G C rs539796974 49126935 + 49126915 49126955 41 TTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTG TTGACATGAAGAAGCAGCAGCGGCTAGGGCCGCGGTAGCTG < 41bp 1 0.653933126581455 1 0.25160676240921 experiment 0.692133746837091 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN1 ENSG00000196396 UTR5 Human protein_coding chr20:49126935 chr20:49126945 . . 0 31 hm5C_associated_SNPs_14271 0 0 11 DDX3X POSTAR2 ENCODE chr20:49126927-49127122
64251 chr20 55088404 55088404 1 + A G rs1059768 55088403 + 55088383 55088423 41 TTCCAGGAGGATGATGTCATCATGCTCAATGGCACCAAGGA TTCCAGGAGGATGATGTCATCGTGCTCAATGGCACCAAGGA < 41bp 1 0.525109639936458 1 0.695362329483032 experiment 0.949780720127083 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55088403 chr20:55088404 nonsynonymous SNV 0.988 0 22 hm5C_associated_SNPs_14273 0 1 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:55088393-55088406
64251 chr20 55983276 55983276 1 + G T rs183032351 55983294 + 55983274 55983314 41 CAGCCCCTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTC CATCCCCTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTC < 41bp 1 0.395309508587721 1 0.240029364824295 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM38 ENSG00000132819 UTR3 Human protein_coding chr20:55983294 chr20:55983276 . . 0 3 hm5C_associated_SNPs_14277 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:55983246-55983296
64251 chr20 55983279 55983279 1 + C A rs11546712 55983294 + 55983274 55983314 41 CAGCCCCTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTC CAGCCACTGGCTGCCCTGGACTGTGCAGAGATGCCTGACTC < 41bp 1 0.376275460450386 1 0.189433872699738 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM38 ENSG00000132819 UTR3 Human protein_coding chr20:55983294 chr20:55983279 . . 0 6 hm5C_associated_SNPs_14278 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:55983246-55983296
64251 chr20 56884985 56884985 1 + C T rs544929556 56885003 + 56884983 56885023 41 CCCTTCTCAACTTAGGGCGGCGGCGGGCCCGCGCCCCTGGC CCTTTCTCAACTTAGGGCGGCGGCGGGCCCGCGCCCCTGGC < 41bp 1 0.721479396807922 1 0.769016325473785 experiment 0.557041206384156 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB22A ENSG00000124209 UTR5 Human protein_coding chr20:56885003 chr20:56884985 . . 0 3 hm5C_associated_SNPs_14279 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr20:56884964-56884985
64251 chr20 56935016 56935016 1 + C T rs41310825 56935005 + 56934985 56935025 41 ATCGTTGGCTTTTGACCTTGCTGAAAAGGAACATATAATTG ATCGTTGGCTTTTGACCTTGCTGAAAAGGAATATATAATTG < 41bp 1 0.565005905098256 1 0.696749210357666 experiment 0.869988189803489 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB22A ENSG00000124209 UTR3 Human protein_coding chr20:56935005 chr20:56935016 . . 0 32 hm5C_associated_SNPs_14280 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:56934973-56935078
64251 chr20 57023850 57023850 1 + A G rs73296848 57023855 + 57023835 57023875 41 AGTGAAAAAAGGTACATATTCCATTTTCTCATTGCCTGAAG AGTGAAAAAAGGTACGTATTCCATTTTCTCATTGCCTGAAG < 41bp 1 0.142717372736263 1 0.233922481536865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VAPB ENSG00000124164 UTR3 Human protein_coding chr20:57023855 chr20:57023850 . . 0 16 hm5C_associated_SNPs_14281 2 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:57023838-57023868
64251 chr20 57253890 57253890 1 + G C rs75424783 57253901 + 57253881 57253921 41 GGTACCTCAGGGTTTCTTTCCCTTTACTCGCTGGCAGCCAT GGTACCTCACGGTTTCTTTCCCTTTACTCGCTGGCAGCCAT < 41bp 1 0.0401514573218626 1 0.0919118821620941 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STX16-NPEPL1 ENSG00000124222 UTR3 Human protein_coding chr20:57253901 chr20:57253890 . . 0 10 hm5C_associated_SNPs_14282 1 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:57253788-57253932
64251 chr20 57289017 57289017 1 + C T rs35104993 57289032 + 57289012 57289052 41 AACAGCGCTGAGTGGGAGGCCGCCTGTGTGAAGGCGGGCAG AACAGTGCTGAGTGGGAGGCCGCCTGTGTGAAGGCGGGCAG < 41bp 1 0.780465292187835 1 0.695706427097321 experiment 0.439069415624329 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289032 chr20:57289017 synonymous SNV . 0 6 hm5C_associated_SNPs_14283 0 0 6 LSM11 POSTAR2 ENCODE chr20:57288995-57289064
64251 chr20 57289645 57289645 1 + T C rs116074533 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCCGGCCTC < 41bp 1 0.429884381749543 1 0.308743000030518 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289645 synonymous SNV . 0 35 hm5C_associated_SNPs_14284 0 0 3 GRWD1 POSTAR2 ENCODE chr20:57289633-57289721
64251 chr20 57466771 57466771 1 + C A rs571673520 57466769 + 57466749 57466789 41 GCCCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTG GCCCGGCCGCGCCCCGCCGCCGACGCCGCCGCCATGGGCTG < 41bp 1 0.743156442237428 1 0.711414337158203 experiment 0.513687115525144 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAS ENSG00000087460 UTR5 Human protein_coding chr20:57466769 chr20:57466771 . . 0 23 hm5C_associated_SNPs_14285 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57466790 57466790 1 + C T rs200810763 57466771 + 57466751 57466791 41 CCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTGCC CCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTGTC < 41bp 1 0.325680782419026 1 0.18599197268486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466771 chr20:57466790 synonymous SNV . 0 40 hm5C_associated_SNPs_14286 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57478807 57478807 1 + C G rs7121 57478822 + 57478802 57478842 41 TACATCCTGAGTGTGATGAACGTGCCTGACTTTGACTTCCC TACATGCTGAGTGTGATGAACGTGCCTGACTTTGACTTCCC < 41bp 1 0.260657050665942 1 0.0425751805305481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57478822 chr20:57478807 nonsynonymous SNV 0.972 4 6 hm5C_associated_SNPs_14287 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:57478720-57478840
64251 chr20 57478846 57478846 1 + C G rs11554266 57478840 + 57478820 57478860 41 AACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACACCCC AACGTGCCTGACTTTGACTTCCCTCCGGTAAGCTACACCCC < 41bp 1 0.0636804459536286 1 0.0748854577541351 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57478840 chr20:57478846 synonymous SNV . 0 27 hm5C_associated_SNPs_14288 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57478783-57478847
64251 chr20 58519926 58519926 1 + G A rs113464598 58519940 + 58519920 58519960 41 CTGTCCGGCAGTGGAAGCAGCTCTAAGGTGGAAACCAGCGG CTGTCCAGCAGTGGAAGCAGCTCTAAGGTGGAAACCAGCGG < 41bp 1 0.692182586855373 1 0.687158584594727 experiment 0.615634826289254 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519940 chr20:58519926 nonsynonymous SNV 0.003 0 7 hm5C_associated_SNPs_14296 0 0 1 UPF1 POSTAR2 ENCODE chr20:58519897-58519962
64251 chr20 60703746 60703746 1 + G A rs79497534 60703730 + 60703710 60703750 41 GCAGGCAGTGCTGTGTTTGTCTCCCGGACATGCTGAGTGAG GCAGGCAGTGCTGTGTTTGTCTCCCGGACATGCTGAATGAG < 41bp 1 0.576328805780925 1 0.75840437412262 experiment 0.847342388438149 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LSM14B ENSG00000149657 intronic Human protein_coding chr20:60703730 chr20:60703746 . . 0 37 hm5C_associated_SNPs_14297 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr20:60703717-60703752
64251 chr20 60776717 60776717 1 + C T rs376233664 60776714 + 60776694 60776734 41 GGATGCAAGTCCAGGCAGAGCGGCGCAGGCAGCTGTGAGCT GGATGCAAGTCCAGGCAGAGCGGTGCAGGCAGCTGTGAGCT < 41bp 1 0.652403787081472 1 0.428146034479141 experiment 0.695192425837057 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTG2 ENSG00000101181 UTR3 Human protein_coding chr20:60776714 chr20:60776717 . . 0 24 hm5C_associated_SNPs_14298 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:60776689-60776721
64251 chr20 60870300 60870300 1 + G A rs115985942 60870287 + 60870267 60870307 41 CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCC CAAAGTGCTGGGATTACAGGCGTGAGCCACTGCACCTGGCC < 41bp 1 0.652774648344889 1 0.525081872940063 experiment 0.694450703310222 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSBPL2 ENSG00000130703 UTR3 Human protein_coding chr20:60870287 chr20:60870300 . . 0 34 hm5C_associated_SNPs_14299 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:60870296-60870397
64251 chr20 60881234 60881234 1 + C A rs552996490 60881250 + 60881230 60881270 41 CTTACATGCCCTTCCTCTTGCAGGAACCCAAGACAGACCAG CTTAAATGCCCTTCCTCTTGCAGGAACCCAAGACAGACCAG < 41bp 1 0.748025080771688 1 0.858721613883972 experiment 0.503949838456624 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000226332 ncRNA_exonic Human antisense chr20:60881250 chr20:60881234 . . 0 5 hm5C_associated_SNPs_14300 0 0 7 SF3A3 POSTAR2 ENCODE chr20:60881196-60881245
64251 chr20 60881235 60881235 1 + A G rs373438307 60881250 + 60881230 60881270 41 CTTACATGCCCTTCCTCTTGCAGGAACCCAAGACAGACCAG CTTACGTGCCCTTCCTCTTGCAGGAACCCAAGACAGACCAG < 41bp 1 0.736723340027472 1 0.874612212181091 experiment 0.526553319945056 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000226332 ncRNA_exonic Human antisense chr20:60881250 chr20:60881235 . . 0 6 hm5C_associated_SNPs_14301 0 0 7 SF3A3 POSTAR2 ENCODE chr20:60881196-60881245
64251 chr20 60881309 60881309 1 + C T rs535044424 60881329 + 60881309 60881349 41 CAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA TAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA < 41bp 1 0.244589313394031 1 0.456413567066193 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881329 chr20:60881309 synonymous SNV . 0 1 hm5C_associated_SNPs_14302 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:60881300-60881324
64251 chr20 60881330 60881330 1 + G A rs2427273 60881329 + 60881309 60881349 41 CAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA CAACCCCCCGATGCCTGGGGCACTGGGGGCCAGCGGAAGCA < 41bp 1 0.199967220711115 1 0.230730146169662 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881329 chr20:60881330 synonymous SNV . 0 22 hm5C_associated_SNPs_14303 0 0 7 UPF1 POSTAR2 GSE69586,GSM1704214 chr20:60881319-60881340
64251 chr20 60882667 60882667 1 + G A rs36021300 60882662 + 60882642 60882682 41 CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCG CTCTTCGCAGCTCCCGGAGCCAGTCAGCAGCGGTCACCCCG < 41bp 1 0.256418460769739 1 0.303906500339508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882662 chr20:60882667 synonymous SNV . 0 26 hm5C_associated_SNPs_14304 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:60882659-60882697
64251 chr20 60882747 60882747 1 + C A rs79836754 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAAATAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG < 41bp 1 0.32885290905957 1 0.376682996749878 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882747 nonsynonymous SNV 0.071 1 6 hm5C_associated_SNPs_14305 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:60882746-60882747
64251 chr20 60882747 60882747 1 + C A rs79836754 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAAATAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC < 41bp 1 0.241374391945776 1 0.467606961727142 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882747 nonsynonymous SNV 0.071 1 4 hm5C_associated_SNPs_14306 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:60882746-60882747
64251 chr20 60882762 60882762 1 + C A rs200789814 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAACTAGCCCGAGCCCCGAGCCCAGTTCCGGGAATGGAGCC < 41bp 1 0.259302321993663 1 0.572503566741943 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882762 nonsynonymous SNV 0.194 1 19 hm5C_associated_SNPs_14307 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 60882763 60882763 1 + G A rs115525800 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAACTAGCCCGAGCCCCGCACCCAGTTCCGGGAATGGAG < 41bp 1 0.245587515222971 1 0.30029159784317 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882763 synonymous SNV . 0 22 hm5C_associated_SNPs_14308 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 60882763 60882763 1 + G A rs115525800 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAACTAGCCCGAGCCCCGCACCCAGTTCCGGGAATGGAGCC < 41bp 1 0.281771406851819 1 0.493960559368134 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882763 synonymous SNV . 0 20 hm5C_associated_SNPs_14309 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 60962188 60962188 1 + A G rs192374410 60962176 + 60962156 60962196 41 CTTCCTTTCTCTCTCGCGCGCGGTGTGGTGGCAGCAGGTGT CTTCCTTTCTCTCTCGCGCGCGGTGTGGTGGCGGCAGGTGT < 41bp 1 0.646723048112905 1 0.583650350570679 experiment 0.706553903774189 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS21 ENSG00000171858 UTR5 Human protein_coding chr20:60962176 chr20:60962188 . . 0 33 hm5C_associated_SNPs_14310 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:60962159-60962194
64251 chr20 60963542 60963542 1 + T G rs114402901 60963554 + 60963534 60963574 41 CACAGATGTGGAATATTTGTCATAAATAAATAATGAAAACC CACAGATGGGGAATATTTGTCATAAATAAATAATGAAAACC < 41bp 1 0.519018559962811 1 0.306372821331024 experiment 0.961962880074378 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS21 ENSG00000171858 UTR3 Human protein_coding chr20:60963554 chr20:60963542 . . 0 9 hm5C_associated_SNPs_14311 0 0 48 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60963361-60963568
64251 chr20 61439428 61439428 1 + C G rs529359972 61439434 + 61439414 61439454 41 CTGGGGCTTGGAGGCAGCTGCTGTCCTCTGAATGGCCCCCA CTGGGGCTTGGAGGGAGCTGCTGTCCTCTGAATGGCCCCCA < 41bp 1 0.421698159485986 1 0.506177008152008 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGFR ENSG00000060491 UTR5 Human protein_coding chr20:61439434 chr20:61439428 . . 0 15 hm5C_associated_SNPs_14313 0 0 9 BUD13 POSTAR2 ENCODE chr20:61439412-61439451
64251 chr20 61449905 61449905 1 + G A rs567371176 61449900 + 61449880 61449920 41 GTCCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGC GTCCTCCAGGTCTGCCTGGGCCCCCAGTGAGTGTCCCTGGC < 41bp 1 0.0973939315307702 1 0.0901413559913635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449900 chr20:61449905 synonymous SNV . 0 26 hm5C_associated_SNPs_14314 0 0 8 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449905 61449905 1 + G A rs567371176 61449901 + 61449881 61449921 41 TCCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCT TCCTCCAGGTCTGCCTGGGCCCCCAGTGAGTGTCCCTGGCT < 41bp 1 0.375975521530644 1 0.368972808122635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449901 chr20:61449905 synonymous SNV . 0 25 hm5C_associated_SNPs_14315 0 0 8 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449905 61449905 1 + G A rs567371176 61449902 + 61449882 61449922 41 CCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTG CCTCCAGGTCTGCCTGGGCCCCCAGTGAGTGTCCCTGGCTG < 41bp 1 0.312374157998587 1 0.373440802097321 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449902 chr20:61449905 synonymous SNV . 0 24 hm5C_associated_SNPs_14316 0 0 8 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449905 61449905 1 + G A rs567371176 61449903 + 61449883 61449923 41 CTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGG CTCCAGGTCTGCCTGGGCCCCCAGTGAGTGTCCCTGGCTGG < 41bp 1 0.200918738851138 1 0.279969990253448 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449903 chr20:61449905 synonymous SNV . 0 23 hm5C_associated_SNPs_14317 0 0 8 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449905 61449905 1 + G A rs567371176 61449904 + 61449884 61449924 41 TCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGGG TCCAGGTCTGCCTGGGCCCCCAGTGAGTGTCCCTGGCTGGG < 41bp 1 0.283075101072302 1 0.482876837253571 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449904 chr20:61449905 synonymous SNV . 0 22 hm5C_associated_SNPs_14318 0 0 8 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61450599 61450599 1 + C G rs143307835 61450587 + 61450567 61450607 41 TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAAC TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCGGGGGAAAC < 41bp 1 0.330361659290722 1 0.0920256376266479 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450587 chr20:61450599 nonsynonymous SNV 0.971 2 33 hm5C_associated_SNPs_14319 0 0 5 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61450599 61450599 1 + C G rs143307835 61450588 + 61450568 61450608 41 GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACC GCACAGGGACCAAAGGGGGCCCCAGGAAAGCGGGGGAAACC < 41bp 1 0.195385105785008 1 0.1876120865345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450588 chr20:61450599 nonsynonymous SNV 0.971 2 32 hm5C_associated_SNPs_14320 0 0 5 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61595026 61595026 1 + C T rs199720748 61595023 + 61595003 61595043 41 TTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGG TTCTTCGAGGAGACCTTCCCCGATGCCAAGGTGAGTCGGGG < 41bp 1 0.290426770869877 1 0.401627987623215 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61595023 chr20:61595026 synonymous SNV . 0 24 hm5C_associated_SNPs_14321 0 0 5 GRWD1 POSTAR2 ENCODE chr20:61595016-61595033
64251 chr20 62152155 62152155 1 + G A rs547337063 62152156 + 62152136 62152176 41 TGTCGTGGCGCGGCTTCCCGCGGTCTTCTCTGCAAATGGGC TGTCGTGGCGCGGCTTCCCACGGTCTTCTCTGCAAATGGGC < 41bp 1 0.380699875581874 1 0.492642015218735 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPDPF ENSG00000125534 UTR5 Human protein_coding chr20:62152156 chr20:62152155 . . 0 20 hm5C_associated_SNPs_14322 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:62152100-62152220
64251 chr20 62152157 62152157 1 + G A rs310625 62152156 + 62152136 62152176 41 TGTCGTGGCGCGGCTTCCCGCGGTCTTCTCTGCAAATGGGC TGTCGTGGCGCGGCTTCCCGCAGTCTTCTCTGCAAATGGGC < 41bp 1 0.313321104109761 1 0.281545668840408 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPDPF ENSG00000125534 UTR5 Human protein_coding chr20:62152156 chr20:62152157 . . 0 22 hm5C_associated_SNPs_14323 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:62152100-62152220
64251 chr20 62305406 62305406 1 + T C rs6010616 62305411 + 62305391 62305431 41 GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG GGCAGCGCAGCAGGGCGAGCCCCACCCGGAGTTCAGCGCGG < 41bp 1 0.0820706731540214 1 0.270367920398712 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305411 chr20:62305406 synonymous SNV . 0 16 hm5C_associated_SNPs_14324 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:62305405-62305406
64251 chr20 62305406 62305406 1 + T C rs6010616 62305412 + 62305392 62305432 41 GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA GCAGCGCAGCAGGGCGAGCCCCACCCGGAGTTCAGCGCGGA < 41bp 1 0.121229756713339 1 0.129518181085587 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305412 chr20:62305406 synonymous SNV . 0 15 hm5C_associated_SNPs_14325 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:62305405-62305406
64251 chr20 62309514 62309514 1 + G A rs41302954 62309512 + 62309492 62309532 41 GCCCAGGGCTGAACATGGAGCTGGAAGACATTGCAAAGCTG GCCCAGGGCTGAACATGGAGCTAGAAGACATTGCAAAGCTG < 41bp 1 0.499488468760957 1 0.482557564973831 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62309512 chr20:62309514 synonymous SNV . 0 23 hm5C_associated_SNPs_14326 0 0 1 U2AF2 POSTAR2 ENCODE chr20:62309482-62309528
64251 chr20 62327317 62327317 1 + C G rs371744822 62327303 + 62327283 62327323 41 ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTG ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCGGGCTTG < 41bp 1 0.237278314040545 1 0.0991323292255402 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTEL1-TNFRSF6B ENSG00000258366 UTR3 Human protein_coding chr20:62327303 chr20:62327317 . . 0 35 hm5C_associated_SNPs_14328 0 0 1 EIF3H POSTAR2 ENCODE chr20:62327312-62327334
64251 chr20 62327323 62327323 1 + G A rs567832149 62327303 + 62327283 62327323 41 ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTG ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTA < 41bp 1 0.257009038424743 1 0.102234452962875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTEL1-TNFRSF6B ENSG00000258366 UTR3 Human protein_coding chr20:62327303 chr20:62327323 . . 0 41 hm5C_associated_SNPs_14329 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr20:62327319-62327341
64251 chr20 62373343 62373343 1 + G A rs140539992 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCATCACC < 41bp 1 0.0758717010606366 1 0.0956601798534393 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373343 synonymous SNV . 0 36 hm5C_associated_SNPs_14330 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr20 62566986 62566986 1 + G A rs373099874 62566984 + 62566964 62567004 41 GAAGGGGCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGT GAAGGGGCCCTGTGCTGGCCCCAGGTCCGCCCCAGAGGAGT < 41bp 1 0.335652276797897 1 0.746488869190216 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566984 chr20:62566986 . . 0 23 hm5C_associated_SNPs_14331 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566985 + 62566965 62567005 41 AAGGGGCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTC AAGGGGCCCTGTGCTGGCCCCAGGTCCGCCCCAGAGGAGTC < 41bp 1 0.543097967089584 1 0.746647417545319 experiment 0.913804065820831 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566985 chr20:62566986 . . 0 22 hm5C_associated_SNPs_14332 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566990 + 62566970 62567010 41 GCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACAC GCCCTGTGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACAC < 41bp 1 0.217718242903178 1 0.179878652095795 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566990 chr20:62566986 . . 0 17 hm5C_associated_SNPs_14333 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566991 + 62566971 62567011 41 CCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACA CCCTGTGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACACA < 41bp 1 0.295033521347032 1 0.260623425245285 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566991 chr20:62566986 . . 0 16 hm5C_associated_SNPs_14334 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566993 + 62566973 62567013 41 CTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGC CTGTGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACACAGC < 41bp 1 0.554708816196244 1 0.181692063808441 experiment 0.890582367607512 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566993 chr20:62566986 . . 0 14 hm5C_associated_SNPs_14335 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566994 + 62566974 62567014 41 TGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCA TGTGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACACAGCA < 41bp 1 0.184405846143819 1 0.505933046340942 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566994 chr20:62566986 . . 0 13 hm5C_associated_SNPs_14336 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566995 + 62566975 62567015 41 GTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCAC GTGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACACAGCAC < 41bp 1 0.644239609391435 1 0.770483136177063 experiment 0.71152078121713 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566995 chr20:62566986 . . 0 12 hm5C_associated_SNPs_14337 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566986 62566986 1 + G A rs373099874 62566996 + 62566976 62567016 41 TGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCACC TGCTGGCCCCAGGTCCGCCCCAGAGGAGTCCACACAGCACC < 41bp 1 0.607184374120593 1 0.859338402748108 experiment 0.785631251758815 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566996 chr20:62566986 . . 0 11 hm5C_associated_SNPs_14338 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566984 + 62566964 62567004 41 GAAGGGGCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGT GAAGGGGCCCTGTGCTGGCCCCGGGTCAGCCCCAGAGGAGT < 41bp 1 0.486503201828967 1 0.765985250473022 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566984 chr20:62566991 . . 0 28 hm5C_associated_SNPs_14339 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566985 + 62566965 62567005 41 AAGGGGCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTC AAGGGGCCCTGTGCTGGCCCCGGGTCAGCCCCAGAGGAGTC < 41bp 1 0.628121169830524 1 0.735438346862793 experiment 0.743757660338952 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566985 chr20:62566991 . . 0 27 hm5C_associated_SNPs_14340 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566990 + 62566970 62567010 41 GCCCTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACAC GCCCTGTGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACAC < 41bp 1 0.401386798440389 1 0.446940720081329 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566990 chr20:62566991 . . 0 22 hm5C_associated_SNPs_14341 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566993 + 62566973 62567013 41 CTGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGC CTGTGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACACAGC < 41bp 1 0.638176447109373 1 0.180318742990494 experiment 0.723647105781254 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566993 chr20:62566991 . . 0 19 hm5C_associated_SNPs_14342 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566994 + 62566974 62567014 41 TGTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCA TGTGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACACAGCA < 41bp 1 0.301877822495012 1 0.613348305225372 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566994 chr20:62566991 . . 0 18 hm5C_associated_SNPs_14343 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566995 + 62566975 62567015 41 GTGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCAC GTGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACACAGCAC < 41bp 1 0.716607233600246 1 0.792767465114594 experiment 0.566785532799507 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566995 chr20:62566991 . . 0 17 hm5C_associated_SNPs_14344 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62566991 62566991 1 + C A rs3810500 62566996 + 62566976 62567016 41 TGCTGGCCCCGGGTCCGCCCCAGAGGAGTCCACACAGCACC TGCTGGCCCCGGGTCAGCCCCAGAGGAGTCCACACAGCACC < 41bp 1 0.654656410162342 1 0.897725701332092 experiment 0.690687179675316 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566996 chr20:62566991 . . 0 16 hm5C_associated_SNPs_14345 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62566975-62567001
64251 chr20 62567038 62567038 1 + C T rs11554630 62567031 + 62567011 62567051 41 AGCACCACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGG AGCACCACCTCCAGAAGGGGCTGGGCCTGGGGTCCTGCAGG < 41bp 1 0.682930812804947 1 0.562683045864105 experiment 0.634138374390106 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567031 chr20:62567038 . . 0 28 hm5C_associated_SNPs_14346 1 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:62567024-62567047
64251 chr20 62567038 62567038 1 + C T rs11554630 62567036 + 62567016 62567056 41 CACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCA CACCTCCAGAAGGGGCTGGGCCTGGGGTCCTGCAGGCGGCA < 41bp 1 0.194732872119369 1 0.342066764831543 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567036 chr20:62567038 . . 0 23 hm5C_associated_SNPs_14347 1 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:62567024-62567047
64251 chr20 62567050 62567050 1 + G C rs191412647 62567031 + 62567011 62567051 41 AGCACCACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGG AGCACCACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCACG < 41bp 1 0.711569261993297 1 0.538369953632355 experiment 0.576861476013407 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567031 chr20:62567050 . . 0 40 hm5C_associated_SNPs_14348 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62567024-62567060
64251 chr20 62567050 62567050 1 + G C rs191412647 62567036 + 62567016 62567056 41 CACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCA CACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCACGCGGCA < 41bp 1 0.423713501475164 1 0.547479331493378 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567036 chr20:62567050 . . 0 35 hm5C_associated_SNPs_14349 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62567024-62567060
64251 chr20 62567050 62567050 1 + G C rs191412647 62567037 + 62567017 62567057 41 ACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCAC ACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCACGCGGCAC < 41bp 1 0.753137670794499 1 0.75341409444809 experiment 0.493724658411002 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567037 chr20:62567050 . . 0 34 hm5C_associated_SNPs_14350 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62567024-62567060
64251 chr20 62567052 62567052 1 + C T rs146360147 62567036 + 62567016 62567056 41 CACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCA CACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGTGGCA < 41bp 1 0.333996772770199 1 0.407073557376862 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567036 chr20:62567052 . . 0 37 hm5C_associated_SNPs_14351 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62567024-62567060
64251 chr20 62567052 62567052 1 + C T rs146360147 62567037 + 62567017 62567057 41 ACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGCGGCAC ACCTCCAGAAGGGGCTGGGCCCGGGGTCCTGCAGGTGGCAC < 41bp 1 0.682502531158312 1 0.651510834693909 experiment 0.634994937683376 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62567037 chr20:62567052 . . 0 36 hm5C_associated_SNPs_14352 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62567024-62567060
64251 chr20 62588141 62588141 1 - G A rs190468747 62588144 - 62588124 62588164 41 CGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGGCGT CGGTCCTCGTCCCCGCCCCGCGCTCTGGTCCCGAGTGGCGT < 41bp 1 0.147610500012096 1 0.0780741572380066 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588144 chr20:62588141 . . 0 24 hm5C_associated_SNPs_14353 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588141 62588141 1 - G A rs190468747 62588146 - 62588126 62588166 41 CCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGGC CCCGGTCCTCGTCCCCGCCCCGCGCTCTGGTCCCGAGTGGC < 41bp 1 0.252923146131517 1 0.262525260448456 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588146 chr20:62588141 . . 0 26 hm5C_associated_SNPs_14354 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588141 62588141 1 - G A rs190468747 62588147 - 62588127 62588167 41 CCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGG CCCCGGTCCTCGTCCCCGCCCCGCGCTCTGGTCCCGAGTGG < 41bp 1 0.376895397163632 1 0.259625494480133 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588147 chr20:62588141 . . 0 27 hm5C_associated_SNPs_14355 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588141 62588141 1 - G A rs190468747 62588148 - 62588128 62588168 41 TCCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTG TCCCCGGTCCTCGTCCCCGCCCCGCGCTCTGGTCCCGAGTG < 41bp 1 0.172424585850522 1 0.216338485479355 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588148 chr20:62588141 . . 0 28 hm5C_associated_SNPs_14356 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588141 62588141 1 - G A rs190468747 62588149 - 62588129 62588169 41 GTCCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGT GTCCCCGGTCCTCGTCCCCGCCCCGCGCTCTGGTCCCGAGT < 41bp 1 0.224463252695911 1 0.0825243890285492 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588149 chr20:62588141 . . 0 29 hm5C_associated_SNPs_14357 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588151 62588151 1 - G A rs139959757 62588144 - 62588124 62588164 41 CGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGGCGT CGGTCCTCGTCCCTGCCCCGCGCCCTGGTCCCGAGTGGCGT < 41bp 1 0.238862259094105 1 0.167861253023148 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588144 chr20:62588151 . . 0 14 hm5C_associated_SNPs_14358 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588151 62588151 1 - G A rs139959757 62588146 - 62588126 62588166 41 CCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGGC CCCGGTCCTCGTCCCTGCCCCGCGCCCTGGTCCCGAGTGGC < 41bp 1 0.244601786299584 1 0.23557111620903 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588146 chr20:62588151 . . 0 16 hm5C_associated_SNPs_14359 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588151 62588151 1 - G A rs139959757 62588147 - 62588127 62588167 41 CCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTGG CCCCGGTCCTCGTCCCTGCCCCGCGCCCTGGTCCCGAGTGG < 41bp 1 0.356462402407628 1 0.36631566286087 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588147 chr20:62588151 . . 0 17 hm5C_associated_SNPs_14360 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588151 62588151 1 - G A rs139959757 62588148 - 62588128 62588168 41 TCCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGTG TCCCCGGTCCTCGTCCCTGCCCCGCGCCCTGGTCCCGAGTG < 41bp 1 0.234122022710872 1 0.197006493806839 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588148 chr20:62588151 . . 0 18 hm5C_associated_SNPs_14361 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62588151 62588151 1 - G A rs139959757 62588149 - 62588129 62588169 41 GTCCCCGGTCCTCGTCCCCGCCCCGCGCCCTGGTCCCGAGT GTCCCCGGTCCTCGTCCCTGCCCCGCGCCCTGGTCCCGAGT < 41bp 1 0.222769848893982 1 0.119118452072144 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UCKL1-AS1 ENSG00000196700 UTR3 Human protein_coding chr20:62588149 chr20:62588151 . . 0 19 hm5C_associated_SNPs_14362 0 0 4 HNRNPK POSTAR2 ENCODE chr20:62588106-62588200
64251 chr20 62664387 62664387 1 + G A rs190671481 62664406 + 62664386 62664426 41 GGGCCGCATGTGGAAGGGCTCTGAGCTGTGTCCTCCTTCAT GAGCCGCATGTGGAAGGGCTCTGAGCTGTGTCCTCCTTCAT < 41bp 1 0.633843595747264 1 0.188876152038574 experiment 0.732312808505472 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRPF6 ENSG00000101161 UTR3 Human protein_coding chr20:62664406 chr20:62664387 . . 0 2 hm5C_associated_SNPs_14363 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:62664380-62664400
64251 chr20 62688877 62688877 1 + C G rs816955 62688887 + 62688867 62688907 41 CACCCTGCGGCGAGGCCCCACAGGAGAATCGATGGTTCTGA CACCCTGCGGGGAGGCCCCACAGGAGAATCGATGGTTCTGA < 41bp 1 0.717372039015337 1 0.781140089035034 experiment 0.565255921969325 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCEA2 ENSG00000171703 UTR5 Human protein_coding chr20:62688887 chr20:62688877 . . 0 11 hm5C_associated_SNPs_14364 0 0 7 CSTF2T POSTAR2 ENCODE chr20:62688816-62688888
64251 chr20 62906514 62906514 1 + G A rs10485816 62906515 + 62906495 62906535 41 ATGTATTGCTCTAGATTGGGCAGTTTAAGTCATTTTAAAGA ATGTATTGCTCTAGATTGGACAGTTTAAGTCATTTTAAAGA < 41bp 1 0.245521252738071 1 0.151423513889313 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCMTD2 ENSG00000203880 UTR3 Human protein_coding chr20:62906515 chr20:62906514 . . 0 20 hm5C_associated_SNPs_14365 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62906421-62906525
64251 chr21 9825836 9825836 1 + A G rs544074340 9825832 + 9825812 9825852 41 GACGGTTCCGGGGGACCGGCCGCGACTGCGGCGGCGGTGGT GACGGTTCCGGGGGACCGGCCGCGGCTGCGGCGGCGGTGGT < 41bp 1 0.733992450600717 1 0.872557282447815 experiment 0.532015098798567 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825832 chr21:9825836 . . 0 25 hm5C_associated_SNPs_14366 0 0 43 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825836 9825836 1 + A G rs544074340 9825837 + 9825817 9825857 41 TTCCGGGGGACCGGCCGCGACTGCGGCGGCGGTGGTGGGGG TTCCGGGGGACCGGCCGCGGCTGCGGCGGCGGTGGTGGGGG < 41bp 1 0.714421787362403 1 0.656926512718201 experiment 0.571156425275194 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825837 chr21:9825836 . . 0 20 hm5C_associated_SNPs_14367 0 0 43 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825836 9825836 1 + A G rs544074340 9825840 + 9825820 9825860 41 CGGGGGACCGGCCGCGACTGCGGCGGCGGTGGTGGGGGGAG CGGGGGACCGGCCGCGGCTGCGGCGGCGGTGGTGGGGGGAG < 41bp 1 0.789868533511286 1 0.863667249679565 experiment 0.420262932977428 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825840 chr21:9825836 . . 0 17 hm5C_associated_SNPs_14368 0 0 43 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825836 9825836 1 + A G rs544074340 9825846 + 9825826 9825866 41 ACCGGCCGCGACTGCGGCGGCGGTGGTGGGGGGAGCCGCGG ACCGGCCGCGGCTGCGGCGGCGGTGGTGGGGGGAGCCGCGG < 41bp 1 0.742222485923425 1 0.806649565696716 experiment 0.51555502815315 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825846 chr21:9825836 . . 0 11 hm5C_associated_SNPs_14369 0 0 43 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825838 9825838 1 + T C rs563875271 9825832 + 9825812 9825852 41 GACGGTTCCGGGGGACCGGCCGCGACTGCGGCGGCGGTGGT GACGGTTCCGGGGGACCGGCCGCGACCGCGGCGGCGGTGGT < 41bp 1 0.745349822757849 1 0.904752850532532 experiment 0.509300354484302 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825832 chr21:9825838 . . 0 27 hm5C_associated_SNPs_14370 0 0 41 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825838 9825838 1 + T C rs563875271 9825837 + 9825817 9825857 41 TTCCGGGGGACCGGCCGCGACTGCGGCGGCGGTGGTGGGGG TTCCGGGGGACCGGCCGCGACCGCGGCGGCGGTGGTGGGGG < 41bp 1 0.569152223109982 1 0.592621684074402 experiment 0.861695553780035 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825837 chr21:9825838 . . 0 22 hm5C_associated_SNPs_14371 0 0 41 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825838 9825838 1 + T C rs563875271 9825843 + 9825823 9825863 41 GGGACCGGCCGCGACTGCGGCGGCGGTGGTGGGGGGAGCCG GGGACCGGCCGCGACCGCGGCGGCGGTGGTGGGGGGAGCCG < 41bp 1 0.742569161714688 1 0.812578022480011 experiment 0.514861676570623 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825843 chr21:9825838 . . 0 16 hm5C_associated_SNPs_14372 0 0 41 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825838 9825838 1 + T C rs563875271 9825846 + 9825826 9825866 41 ACCGGCCGCGACTGCGGCGGCGGTGGTGGGGGGAGCCGCGG ACCGGCCGCGACCGCGGCGGCGGTGGTGGGGGGAGCCGCGG < 41bp 1 0.741445868063484 1 0.762924611568451 experiment 0.517108263873033 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825846 chr21:9825838 . . 0 13 hm5C_associated_SNPs_14373 0 0 41 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825820-9825840
64251 chr21 9825916 9825916 1 + G A rs564942295 9825901 + 9825881 9825921 41 CGGTCGGCCGCCCCGGGTGCCGCGCGGTGCCGCCGGCGGCG CGGTCGGCCGCCCCGGGTGCCGCGCGGTGCCGCCGACGGCG < 41bp 1 0.580569216603609 1 0.58292543888092 experiment 0.838861566792782 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825901 chr21:9825916 . . 0 36 hm5C_associated_SNPs_14374 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825905 + 9825885 9825925 41 CGGCCGCCCCGGGTGCCGCGCGGTGCCGCCGGCGGCGGTGA CGGCCGCCCCGGGTGCCGCGCGGTGCCGCCGACGGCGGTGA < 41bp 1 0.528015272150155 1 0.515968084335327 experiment 0.943969455699691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825905 chr21:9825916 . . 0 32 hm5C_associated_SNPs_14375 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825910 + 9825890 9825930 41 GCCCCGGGTGCCGCGCGGTGCCGCCGGCGGCGGTGAGGCCC GCCCCGGGTGCCGCGCGGTGCCGCCGACGGCGGTGAGGCCC < 41bp 1 0.455936736025474 1 0.261114031076431 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825910 chr21:9825916 . . 0 27 hm5C_associated_SNPs_14376 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825913 + 9825893 9825933 41 CCGGGTGCCGCGCGGTGCCGCCGGCGGCGGTGAGGCCCCGC CCGGGTGCCGCGCGGTGCCGCCGACGGCGGTGAGGCCCCGC < 41bp 1 0.353283285256263 1 0.665869414806366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825913 chr21:9825916 . . 0 24 hm5C_associated_SNPs_14377 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825914 + 9825894 9825934 41 CGGGTGCCGCGCGGTGCCGCCGGCGGCGGTGAGGCCCCGCG CGGGTGCCGCGCGGTGCCGCCGACGGCGGTGAGGCCCCGCG < 41bp 1 0.618410139817653 1 0.595958292484283 experiment 0.763179720364695 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825914 chr21:9825916 . . 0 23 hm5C_associated_SNPs_14378 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825928 + 9825908 9825948 41 TGCCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCT TGCCGCCGACGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCT < 41bp 1 0.437280673328597 1 0.458981275558472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825928 chr21:9825916 . . 0 9 hm5C_associated_SNPs_14379 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825930 + 9825910 9825950 41 CCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGC CCGCCGACGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGC < 41bp 1 0.678657510014302 1 0.537939071655273 experiment 0.642684979971397 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825930 chr21:9825916 . . 0 7 hm5C_associated_SNPs_14380 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825916 9825916 1 + G A rs564942295 9825935 + 9825915 9825955 41 GGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCG GACGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCG < 41bp 1 0.617873432233317 1 0.274904668331146 experiment 0.764253135533366 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825935 chr21:9825916 . . 0 2 hm5C_associated_SNPs_14381 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:9825440-9826080
64251 chr21 9825935 9825935 1 + C T rs547209479 9825928 + 9825908 9825948 41 TGCCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCT TGCCGCCGGCGGCGGTGAGGCCCCGCGTGTGTGTCCCGGCT < 41bp 1 0.461713937606064 1 0.374808222055435 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825928 chr21:9825935 . . 0 28 hm5C_associated_SNPs_14382 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825935 9825935 1 + C T rs547209479 9825930 + 9825910 9825950 41 CCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGC CCGCCGGCGGCGGTGAGGCCCCGCGTGTGTGTCCCGGCTGC < 41bp 1 0.69419159941802 1 0.404431849718094 experiment 0.61161680116396 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825930 chr21:9825935 . . 0 26 hm5C_associated_SNPs_14383 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825935 9825935 1 + C T rs547209479 9825942 + 9825922 9825962 41 GTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGC GTGAGGCCCCGCGTGTGTGTCCCGGCTGCGGTCGGCCGCGC < 41bp 1 0.728957503232616 1 0.70982551574707 experiment 0.542084993534768 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825942 chr21:9825935 . . 0 14 hm5C_associated_SNPs_14384 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825935 9825935 1 + C T rs547209479 9825943 + 9825923 9825963 41 TGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGCT TGAGGCCCCGCGTGTGTGTCCCGGCTGCGGTCGGCCGCGCT < 41bp 1 0.441733502197019 1 0.675536453723907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825943 chr21:9825935 . . 0 13 hm5C_associated_SNPs_14385 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825935 9825935 1 + C T rs547209479 9825944 + 9825924 9825964 41 GAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGCTC GAGGCCCCGCGTGTGTGTCCCGGCTGCGGTCGGCCGCGCTC < 41bp 1 0.676377468082573 1 0.771051406860352 experiment 0.647245063834854 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825944 chr21:9825935 . . 0 12 hm5C_associated_SNPs_14386 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825935 9825935 1 + C T rs547209479 9825954 + 9825934 9825974 41 GCGTGTGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCC GTGTGTGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCC < 41bp 1 0.584122822301327 1 0.694734632968903 experiment 0.831754355397345 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825954 chr21:9825935 . . 0 2 hm5C_associated_SNPs_14387 0 0 67 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825928 + 9825908 9825948 41 TGCCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCT TGCCGCCGGCGGCGGTGAGGCCCCGCGCGTGCGTCCCGGCT < 41bp 1 0.453320934594839 1 0.552919745445251 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825928 chr21:9825939 . . 0 32 hm5C_associated_SNPs_14388 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825930 + 9825910 9825950 41 CCGCCGGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGC CCGCCGGCGGCGGTGAGGCCCCGCGCGTGCGTCCCGGCTGC < 41bp 1 0.699093026838603 1 0.709578275680542 experiment 0.601813946322793 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825930 chr21:9825939 . . 0 30 hm5C_associated_SNPs_14389 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825935 + 9825915 9825955 41 GGCGGCGGTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCG GGCGGCGGTGAGGCCCCGCGCGTGCGTCCCGGCTGCGGTCG < 41bp 1 0.571669416349883 1 0.603969037532806 experiment 0.856661167300233 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825935 chr21:9825939 . . 0 25 hm5C_associated_SNPs_14390 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825942 + 9825922 9825962 41 GTGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGC GTGAGGCCCCGCGCGTGCGTCCCGGCTGCGGTCGGCCGCGC < 41bp 1 0.689092013957229 1 0.654417455196381 experiment 0.621815972085542 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825942 chr21:9825939 . . 0 18 hm5C_associated_SNPs_14391 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825943 + 9825923 9825963 41 TGAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGCT TGAGGCCCCGCGCGTGCGTCCCGGCTGCGGTCGGCCGCGCT < 41bp 1 0.416517630398885 1 0.736661553382874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825943 chr21:9825939 . . 0 17 hm5C_associated_SNPs_14392 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825944 + 9825924 9825964 41 GAGGCCCCGCGCGTGTGTCCCGGCTGCGGTCGGCCGCGCTC GAGGCCCCGCGCGTGCGTCCCGGCTGCGGTCGGCCGCGCTC < 41bp 1 0.678371065881459 1 0.690582513809204 experiment 0.643257868237083 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825944 chr21:9825939 . . 0 16 hm5C_associated_SNPs_14393 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825954 + 9825934 9825974 41 GCGTGTGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCC GCGTGCGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCC < 41bp 1 0.58533309933469 1 0.527468025684357 experiment 0.829333801330621 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825954 chr21:9825939 . . 0 6 hm5C_associated_SNPs_14394 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825957 + 9825937 9825977 41 TGTGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCCCGT TGCGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCCCGT < 41bp 1 0.452967635024373 1 0.426984846591949 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825957 chr21:9825939 . . 0 3 hm5C_associated_SNPs_14395 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825939 9825939 1 + T C rs560916630 9825958 + 9825938 9825978 41 GTGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCCCGTG GCGTCCCGGCTGCGGTCGGCCGCGCTCGAGGGGTCCCCGTG < 41bp 1 0.608219456631276 1 0.422574460506439 experiment 0.783561086737447 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825958 chr21:9825939 . . 0 2 hm5C_associated_SNPs_14396 0 0 74 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:9825920-9825940
64251 chr21 9825985 9825985 1 + C G rs550039611 9825972 + 9825952 9825992 41 GTCGGCCGCGCTCGAGGGGTCCCCGTGGCGTCCCCTTCCCC GTCGGCCGCGCTCGAGGGGTCCCCGTGGCGTCCGCTTCCCC < 41bp 1 0.362112764777528 1 0.192402780056 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825972 chr21:9825985 . . 0 34 hm5C_associated_SNPs_14397 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825985 9825985 1 + C G rs550039611 9825983 + 9825963 9826003 41 TCGAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCT TCGAGGGGTCCCCGTGGCGTCCGCTTCCCCGCCGGCCGCCT < 41bp 1 0.331999211715028 1 0.0629633963108063 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825983 chr21:9825985 . . 0 23 hm5C_associated_SNPs_14398 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825985 9825985 1 + C G rs550039611 9825986 + 9825966 9826006 41 AGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTC AGGGGTCCCCGTGGCGTCCGCTTCCCCGCCGGCCGCCTTTC < 41bp 1 0.232098000375406 1 0.154115557670593 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825986 chr21:9825985 . . 0 20 hm5C_associated_SNPs_14399 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825985 9825985 1 + C G rs550039611 9825990 + 9825970 9826010 41 GTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGC GTCCCCGTGGCGTCCGCTTCCCCGCCGGCCGCCTTTCTCGC < 41bp 1 0.475215228771136 1 0.300613105297089 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825990 chr21:9825985 . . 0 16 hm5C_associated_SNPs_14400 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825985 9825985 1 + C G rs550039611 9825991 + 9825971 9826011 41 TCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGCG TCCCCGTGGCGTCCGCTTCCCCGCCGGCCGCCTTTCTCGCG < 41bp 1 0.409418304007938 1 0.225399702787399 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825991 chr21:9825985 . . 0 15 hm5C_associated_SNPs_14401 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825985 9825985 1 + C G rs550039611 9825999 + 9825979 9826019 41 GCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGCGCCTTCCCC GCGTCCGCTTCCCCGCCGGCCGCCTTTCTCGCGCCTTCCCC < 41bp 1 0.399581541537461 1 0.0666941404342651 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825999 chr21:9825985 . . 0 7 hm5C_associated_SNPs_14402 0 0 78 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825983 + 9825963 9826003 41 TCGAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCT TCGAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCAGCCT < 41bp 1 0.221522126972609 1 0.0277998149394989 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825983 chr21:9825999 . . 0 37 hm5C_associated_SNPs_14403 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825985 + 9825965 9826005 41 GAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTT GAGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCAGCCTTT < 41bp 1 0.0449904219020876 1 0.0370005071163177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825985 chr21:9825999 . . 0 35 hm5C_associated_SNPs_14404 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825986 + 9825966 9826006 41 AGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTC AGGGGTCCCCGTGGCGTCCCCTTCCCCGCCGGCAGCCTTTC < 41bp 1 0.216786450774102 1 0.10042867064476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825986 chr21:9825999 . . 0 34 hm5C_associated_SNPs_14405 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825990 + 9825970 9826010 41 GTCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGC GTCCCCGTGGCGTCCCCTTCCCCGCCGGCAGCCTTTCTCGC < 41bp 1 0.438424676604081 1 0.29218065738678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825990 chr21:9825999 . . 0 30 hm5C_associated_SNPs_14406 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9825991 + 9825971 9826011 41 TCCCCGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGCG TCCCCGTGGCGTCCCCTTCCCCGCCGGCAGCCTTTCTCGCG < 41bp 1 0.404083941131848 1 0.179612576961517 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825991 chr21:9825999 . . 0 29 hm5C_associated_SNPs_14407 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9826006 + 9825986 9826026 41 CTTCCCCGCCGGCCGCCTTTCTCGCGCCTTCCCCGTCGCCC CTTCCCCGCCGGCAGCCTTTCTCGCGCCTTCCCCGTCGCCC < 41bp 1 0.570017397408273 1 0.28901731967926 experiment 0.859965205183455 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9826006 chr21:9825999 . . 0 14 hm5C_associated_SNPs_14408 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9825999 9825999 1 + C A rs538400500 9826008 + 9825988 9826028 41 TCCCCGCCGGCCGCCTTTCTCGCGCCTTCCCCGTCGCCCCG TCCCCGCCGGCAGCCTTTCTCGCGCCTTCCCCGTCGCCCCG < 41bp 1 0.74380257600813 1 0.88564544916153 experiment 0.512394847983741 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9826008 chr21:9825999 . . 0 12 hm5C_associated_SNPs_14409 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr21 9826230 9826230 1 + G A rs541117083 9826226 + 9826206 9826246 41 GCGTGCGCCCGAGCGCGGCCCGGTGGTCCCTCCCGGACAGG GCGTGCGCCCGAGCGCGGCCCGGTAGTCCCTCCCGGACAGG < 41bp 1 0.661230733332956 1 0.26841813325882 experiment 0.677538533334089 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3687-1;MIR3687-2 ENSG00000264063 ncRNA_exonic Human miRNA chr21:9826226 chr21:9826230 . . 0 25 hm5C_associated_SNPs_14410 0 0 111 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9826210-9826267
64251 chr21 9826230 9826230 1 + G A rs541117083 9826233 + 9826213 9826253 41 CCCGAGCGCGGCCCGGTGGTCCCTCCCGGACAGGCGTTCGT CCCGAGCGCGGCCCGGTAGTCCCTCCCGGACAGGCGTTCGT < 41bp 1 0.154770205694832 1 0.151145219802856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR3687-1;MIR3687-2 ENSG00000264063 ncRNA_exonic Human miRNA chr21:9826233 chr21:9826230 . . 0 18 hm5C_associated_SNPs_14411 0 0 111 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9826210-9826267
64251 chr21 17250133 17250133 1 + G A rs34979861 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAATTAAATGAGCAAGCCACAGAACTCTTCGAATCTG < 41bp 1 0.404340114570476 1 0.163105189800262 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250133 nonsynonymous SNV 0.894 3 23 hm5C_associated_SNPs_14412 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chr21 30714995 30714995 1 + C G rs61735775 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCGAGAGGA < 41bp 1 0.268700208981657 1 0.0914976596832275 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714995 synonymous SNV . 0 35 hm5C_associated_SNPs_14413 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr21:30714959-30714995
64251 chr21 33040849 33040849 1 + T A rs143100660 33040833 + 33040813 33040853 41 AGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCTGGAA AGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCAGGAA < 41bp 1 0.662580142777395 1 0.362880706787109 experiment 0.674839714445211 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SOD1 ENSG00000142168 CDS Human protein_coding chr21:33040833 chr21:33040849 synonymous SNV . 0 37 hm5C_associated_SNPs_14414 1 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:33040797-33040850
64251 chr21 34787294 34787294 1 + C G rs4986958 34787311 + 34787291 34787331 41 GCACGAGGCCTGTTGTCTACCAAGTGCAGTTTAAATAGTAA GCAGGAGGCCTGTTGTCTACCAAGTGCAGTTTAAATAGTAA < 41bp 1 0.567372969733284 1 0.701852202415466 experiment 0.865254060533431 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34787311 chr21:34787294 nonsynonymous SNV 0.001 1 4 hm5C_associated_SNPs_14418 1 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:34787280-34787300
64251 chr21 34809293 34809293 1 + T C rs145162057 34809311 + 34809291 34809331 41 ACTGGCTCCCTGGAAGAGATCAAGCCATCGGAGCTGCTAGA ACCGGCTCCCTGGAAGAGATCAAGCCATCGGAGCTGCTAGA < 41bp 1 0.473066099997743 1 0.285241067409515 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFNGR2 ENSG00000159128 UTR3 Human protein_coding chr21:34809311 chr21:34809293 . . 0 3 hm5C_associated_SNPs_14420 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:34809258-34809410
64251 chr21 35477883 35477883 1 + C A rs75868158 35477892 + 35477872 35477912 41 TTGTAAGAGACCAGTTAGTACACTGGGGGTGTATATTGTGT TTGTAAGAGACAAGTTAGTACACTGGGGGTGTATATTGTGT < 41bp 1 0.283921758478444 1 0.353203475475311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC5A3 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35477892 chr21:35477883 . . 0 12 hm5C_associated_SNPs_14421 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:35477757-35477921
64251 chr21 37612093 37612093 1 + C T rs61756713 37612088 + 37612068 37612108 41 TGTTTGTCGTGCTGGACAGCCTGGCCTGCACGGATGGTGCC TGTTTGTCGTGCTGGACAGCCTGGCTTGCACGGATGGTGCC < 41bp 1 0.567916722288224 1 0.466522812843323 experiment 0.864166555423551 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOPEY2 ENSG00000142197 CDS Human protein_coding chr21:37612088 chr21:37612093 synonymous SNV . 0 26 hm5C_associated_SNPs_14422 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr21:37612084-37612104
64251 chr21 38558042 38558042 1 + A G rs143235006 38558059 + 38558039 38558079 41 AACATGAATTACATCTGGATCAGTCCCTTGAAATCAGGCAA AACGTGAATTACATCTGGATCAGTCCCTTGAAATCAGGCAA < 41bp 1 0.0571830080188918 1 0.203342437744141 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38558059 chr21:38558042 nonsynonymous SNV 0.874 0 4 hm5C_associated_SNPs_14423 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:38558010-38558050
64251 chr21 40191431 40191431 1 + T A rs457705 40191451 + 40191431 40191471 41 TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT ACCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT < 41bp 1 0.593761265742949 1 0.394904345273972 experiment 0.812477468514102 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETS2 ENSG00000157557 CDS Human protein_coding chr21:40191451 chr21:40191431 synonymous SNV . 0 1 hm5C_associated_SNPs_14424 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr21:40191420-40191440
64251 chr21 40752394 40752394 1 + C A rs139208510 40752408 + 40752388 40752428 41 CCTCCTCCCGTCCTTCTCATCCTTCGTAAGTGGCTGCCTGG CCTCCTACCGTCCTTCTCATCCTTCGTAAGTGGCTGCCTGG < 41bp 1 0.072720293741157 1 0.187917739152908 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40752408 chr21:40752394 synonymous SNV . 0 7 hm5C_associated_SNPs_14428 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr21:40752380-40752400
64251 chr21 44450181 44450181 1 + G C rs140174291 44450169 + 44450149 44450189 41 GGTGCCCTGGCCCCTGCCCACATCAGCGGGCTGGTCTTGGA GGTGCCCTGGCCCCTGCCCACATCAGCGGGCTCGTCTTGGA < 41bp 1 0.74579918804623 1 0.0610469579696655 experiment 0.508401623907539 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44450169 chr21:44450181 synonymous SNV . 0 33 hm5C_associated_SNPs_14431 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr21:44450143-44450191
64251 chr21 45106786 45106786 1 + T G rs138939671 45106800 + 45106780 45106820 41 AAACTTTTAGAGAAAACTAACTTGGAAAAGGAGAAAGGTAA AAACTTGTAGAGAAAACTAACTTGGAAAAGGAGAAAGGTAA < 41bp 1 0.253146266434951 1 0.168463617563248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1B ENSG00000160208 CDS Human protein_coding chr21:45106800 chr21:45106786 nonsynonymous SNV 0.080 0 7 hm5C_associated_SNPs_14435 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067861 chr21:45106761-45106799
64251 chr21 45168884 45168884 1 + G A rs11539534 45168891 + 45168871 45168911 41 GCCAGTACGTCCCGGAGGACCTCCTTCCCGTCTACAAAGAA GCCAGTACGTCCCAGAGGACCTCCTTCCCGTCTACAAAGAA < 41bp 1 0.167741099076644 1 0.214289635419846 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDXK ENSG00000160209 CDS Human protein_coding chr21:45168891 chr21:45168884 synonymous SNV . 0 14 hm5C_associated_SNPs_14436 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45168875-45168900
64251 chr21 45168884 45168884 1 + G A rs11539534 45168893 + 45168873 45168913 41 CAGTACGTCCCGGAGGACCTCCTTCCCGTCTACAAAGAAAA CAGTACGTCCCAGAGGACCTCCTTCCCGTCTACAAAGAAAA < 41bp 1 0.00319008227764204 1 0.142032355070114 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDXK ENSG00000160209 CDS Human protein_coding chr21:45168893 chr21:45168884 synonymous SNV . 0 12 hm5C_associated_SNPs_14437 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45168875-45168900
64251 chr21 45168884 45168884 1 + G A rs11539534 45168894 + 45168874 45168914 41 AGTACGTCCCGGAGGACCTCCTTCCCGTCTACAAAGAAAAA AGTACGTCCCAGAGGACCTCCTTCCCGTCTACAAAGAAAAA < 41bp 1 0.0192815913439575 1 0.127814888954163 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDXK ENSG00000160209 CDS Human protein_coding chr21:45168894 chr21:45168884 synonymous SNV . 0 11 hm5C_associated_SNPs_14438 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45168875-45168900
64251 chr21 45168914 45168914 1 + A G rs112579284 45168894 + 45168874 45168914 41 AGTACGTCCCGGAGGACCTCCTTCCCGTCTACAAAGAAAAA AGTACGTCCCGGAGGACCTCCTTCCCGTCTACAAAGAAAAG < 41bp 1 0.0219667370493916 1 0.139310330152512 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDXK ENSG00000160209 CDS Human protein_coding chr21:45168894 chr21:45168914 synonymous SNV . 0 41 hm5C_associated_SNPs_14439 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr21:45168909-45168930
64251 chr21 45176621 45176621 1 + C G rs17004606 45176637 + 45176617 45176657 41 CTCTCAGCTACCCGCGGGACCTCTTGTAACCCATCGGCATC CTCTGAGCTACCCGCGGGACCTCTTGTAACCCATCGGCATC < 41bp 1 0.130082234692746 1 0.01759272813797 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45176637 chr21:45176621 . . 0 5 hm5C_associated_SNPs_14440 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45176584-45176643
64251 chr21 45177999 45177999 1 + C T rs546389404 45178014 + 45177994 45178034 41 TGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAG TGCCCTTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAG < 41bp 1 0.613381673429808 1 0.776283740997314 experiment 0.773236653140384 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45178014 chr21:45177999 . . 0 6 hm5C_associated_SNPs_14441 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45177888-45178370
64251 chr21 45178031 45178031 1 + C A rs571276950 45178014 + 45177994 45178034 41 TGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGCGAG TGCCCCTGCAGTGGGTGTTACGGGCGGTGTGCCCTGGAGAG < 41bp 1 0.587580879017455 1 0.697782039642334 experiment 0.824838241965091 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45178014 chr21:45178031 . . 0 38 hm5C_associated_SNPs_14442 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr21:45178020-45178040
64251 chr21 45178438 45178438 1 + C A rs4819309 45178448 + 45178428 45178468 41 TTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGCCTTC TTCGTCTCTCATGACTTCGGCAGAGGCCCCTGGTGGCCTTC < 41bp 1 0.406209569433089 1 0.900708317756653 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45178448 chr21:45178438 . . 0 11 hm5C_associated_SNPs_14443 0 0 1 YBX3 POSTAR2 ENCODE chr21:45178432-45178464
64251 chr21 45178456 45178456 1 + C T rs182500341 45178448 + 45178428 45178468 41 TTCGTCTCTCCTGACTTCGGCAGAGGCCCCTGGTGGCCTTC TTCGTCTCTCCTGACTTCGGCAGAGGCCTCTGGTGGCCTTC < 41bp 1 0.397360417056574 1 0.888582110404968 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45178448 chr21:45178456 . . 0 29 hm5C_associated_SNPs_14444 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45178442-45178471
64251 chr21 45179365 45179365 1 + A T rs34480572 45179362 + 45179342 45179382 41 GTGTCCATGTTTATGGAGATCAGAGGTGTCCCCACTGTGTG GTGTCCATGTTTATGGAGATCAGTGGTGTCCCCACTGTGTG < 41bp 1 0.565145509805123 1 0.356433868408203 experiment 0.869708980389755 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45179362 chr21:45179365 . . 0 24 hm5C_associated_SNPs_14445 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45179337-45179416
64251 chr21 45180338 45180338 1 + A G rs8133485 45180353 + 45180333 45180373 41 CAGGCATGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTT CAGGCGTGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTT < 41bp 1 0.601204324386408 1 0.511409282684326 experiment 0.797591351227183 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45180353 chr21:45180338 . . 0 6 hm5C_associated_SNPs_14446 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45180331-45180419
64251 chr21 45180340 45180340 1 + G A rs548296691 45180353 + 45180333 45180373 41 CAGGCATGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTT CAGGCATAAGCCAGTGCACCCGGCGGAATCTTGGAATTTTT < 41bp 1 0.573897523961696 1 0.403981506824493 experiment 0.852204952076608 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45180353 chr21:45180340 . . 0 8 hm5C_associated_SNPs_14447 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45180331-45180419
64251 chr21 45180354 45180354 1 + G A rs537717783 45180353 + 45180333 45180373 41 CAGGCATGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTT CAGGCATGAGCCAGTGCACCCAGCGGAATCTTGGAATTTTT < 41bp 1 0.575942929191105 1 0.377723306417465 experiment 0.848114141617791 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45180353 chr21:45180354 . . 0 22 hm5C_associated_SNPs_14448 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45180331-45180419
64251 chr21 45181446 45181446 1 + G A rs762407 45181445 + 45181425 45181465 41 TCGCCTCGCCCACCGGCCTGCGAAGCCAGCATCTCCGTGAA TCGCCTCGCCCACCGGCCTGCAAAGCCAGCATCTCCGTGAA < 41bp 1 0.402211160533626 1 0.367080837488174 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45181445 chr21:45181446 . . 0 22 hm5C_associated_SNPs_14449 0 1 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45181413-45181446
64251 chr21 45181944 45181944 1 + A G rs111429557 45181952 + 45181932 45181972 41 TCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAA TCCCTCCGTGGAGTGGAGCTCAGCTCTTCGGAGGCATCAAA < 41bp 1 0.562627304980294 1 0.47877910733223 experiment 0.874745390039411 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45181952 chr21:45181944 . . 0 13 hm5C_associated_SNPs_14450 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr21:45181942-45181965
64251 chr21 45181961 45181961 1 + G A rs372165329 45181952 + 45181932 45181972 41 TCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAA TCCCTCCGTGGAATGGAGCTCAGCTCTTCAGAGGCATCAAA < 41bp 1 0.514277068671958 1 0.148986130952835 experiment 0.971445862656083 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45181952 chr21:45181961 . . 0 30 hm5C_associated_SNPs_14451 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr21:45181942-45181965
64251 chr21 45181967 45181967 1 + A C rs112055173 45181952 + 45181932 45181972 41 TCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCATCAAA TCCCTCCGTGGAATGGAGCTCAGCTCTTCGGAGGCCTCAAA < 41bp 1 0.566476081843082 1 0.655671179294586 experiment 0.867047836313837 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXK ENSG00000160209 UTR3 Human protein_coding chr21:45181952 chr21:45181967 . . 0 36 hm5C_associated_SNPs_14452 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr21:45181954-45181973
64251 chr21 45217929 45217929 1 + T C rs2838379 45217920 + 45217900 45217940 41 GCGTCGGACAGTGATGAGTCCTCTGAGGGTGGTGAGCGTGG GCGTCGGACAGTGATGAGTCCTCTGAGGGCGGTGAGCGTGG < 41bp 1 0.43496486927593 1 0.30589359998703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217920 chr21:45217929 synonymous SNV . 0 30 hm5C_associated_SNPs_14453 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45217802-45217931
64251 chr21 45217929 45217929 1 + T C rs2838379 45217944 + 45217924 45217964 41 GAGGGTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTC GAGGGCGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTC < 41bp 1 0.639755152573427 1 0.471365094184875 experiment 0.720489694853145 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217944 chr21:45217929 synonymous SNV . 0 6 hm5C_associated_SNPs_14454 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45217802-45217931
64251 chr21 45217929 45217929 1 + T C rs2838379 45217948 + 45217928 45217968 41 GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG GCGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG < 41bp 1 0.203258621213743 1 0.215269535779953 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217948 chr21:45217929 synonymous SNV . 0 2 hm5C_associated_SNPs_14455 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45217802-45217931
64251 chr21 45217936 45217936 1 + C G rs200937759 45217920 + 45217900 45217940 41 GCGTCGGACAGTGATGAGTCCTCTGAGGGTGGTGAGCGTGG GCGTCGGACAGTGATGAGTCCTCTGAGGGTGGTGAGGGTGG < 41bp 1 0.374723293694763 1 0.356832146644592 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217920 chr21:45217936 nonsynonymous SNV 0.000 0 37 hm5C_associated_SNPs_14456 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:45217920-45217940
64251 chr21 45217936 45217936 1 + C G rs200937759 45217944 + 45217924 45217964 41 GAGGGTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTC GAGGGTGGTGAGGGTGGAGACGCGCTGTCCCAGAAGAGGTC < 41bp 1 0.692869152827219 1 0.571770250797272 experiment 0.614261694345561 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217944 chr21:45217936 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_14457 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:45217920-45217940
64251 chr21 45217936 45217936 1 + C G rs200937759 45217948 + 45217928 45217968 41 GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG GTGGTGAGGGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG < 41bp 1 0.229507665437229 1 0.339119106531143 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217948 chr21:45217936 nonsynonymous SNV 0.000 0 9 hm5C_associated_SNPs_14458 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:45217920-45217940
64251 chr21 45217963 45217963 1 + T C rs200385471 45217944 + 45217924 45217964 41 GAGGGTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTC GAGGGTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGCC < 41bp 1 0.626489098369508 1 0.510167837142944 experiment 0.747021803260985 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217944 chr21:45217963 nonsynonymous SNV 0.016 0 40 hm5C_associated_SNPs_14459 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45217943-45217964
64251 chr21 45217963 45217963 1 + T C rs200385471 45217948 + 45217928 45217968 41 GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGCCTGAG < 41bp 1 0.221885273099029 1 0.385236293077469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217948 chr21:45217963 nonsynonymous SNV 0.016 0 36 hm5C_associated_SNPs_14460 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45217943-45217964
64251 chr21 45217963 45217963 1 + T C rs200385471 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG CGCGCTGTCCCAGAAGAGGCCTGAGAAGCCGCCCGCAGGTG < 41bp 1 0.625764737319275 1 0.22825813293457 experiment 0.748470525361451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217963 nonsynonymous SNV 0.016 0 20 hm5C_associated_SNPs_14461 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45217943-45217964
64251 chr21 45217973 45217973 1 + C A rs58028593 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG CGCGCTGTCCCAGAAGAGGTCTGAGAAGCAGCCCGCAGGTG < 41bp 1 0.686154837288497 1 0.199104428291321 experiment 0.627690325423006 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217973 nonsynonymous SNV 0.001 0 30 hm5C_associated_SNPs_14462 0 0 2 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr21 45217979 45217979 1 + C T rs117749073 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGTAGGTG < 41bp 1 0.650130013130928 1 0.189361721277237 experiment 0.699739973738145 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217979 nonsynonymous SNV 0.006 0 36 hm5C_associated_SNPs_14463 0 0 1 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr21 45544594 45544594 1 + T C rs2187313 45544584 + 45544564 45544604 41 AAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACGCCAT AAGAGGTTCGAGATCTCTTGCAACCTGTCTCTGGACGCCAT < 41bp 1 0.31203341963895 1 0.0810606181621552 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45544584 chr21:45544594 synonymous SNV . 0 31 hm5C_associated_SNPs_14464 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr21:45544560-45544602
64251 chr21 45550876 45550876 1 + C T rs9306175 45550867 + 45550847 45550887 41 CGGCACGCACTGGCACCTGGCCCCAGGAGCGGGGCCGTGTG CGGCACGCACTGGCACCTGGCCCCAGGAGTGGGGCCGTGTG < 41bp 1 0.597199005150254 1 0.231043130159378 experiment 0.805601989699491 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550867 chr21:45550876 . . 0 30 hm5C_associated_SNPs_14470 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45550869-45551037
64251 chr21 45550876 45550876 1 + C T rs9306175 45550868 + 45550848 45550888 41 GGCACGCACTGGCACCTGGCCCCAGGAGCGGGGCCGTGTGA GGCACGCACTGGCACCTGGCCCCAGGAGTGGGGCCGTGTGA < 41bp 1 0.539785596579205 1 0.234072715044022 experiment 0.92042880684159 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550868 chr21:45550876 . . 0 29 hm5C_associated_SNPs_14471 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45550869-45551037
64251 chr21 45550876 45550876 1 + C T rs9306175 45550869 + 45550849 45550889 41 GCACGCACTGGCACCTGGCCCCAGGAGCGGGGCCGTGTGAA GCACGCACTGGCACCTGGCCCCAGGAGTGGGGCCGTGTGAA < 41bp 1 0.653640635438196 1 0.639004051685333 experiment 0.692718729123608 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550869 chr21:45550876 . . 0 28 hm5C_associated_SNPs_14472 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45550869-45551037
64251 chr21 45550876 45550876 1 + C T rs9306175 45550881 + 45550861 45550901 41 ACCTGGCCCCAGGAGCGGGGCCGTGTGAACGGTGATGAATG ACCTGGCCCCAGGAGTGGGGCCGTGTGAACGGTGATGAATG < 41bp 1 0.276903427401092 1 0.165766984224319 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550881 chr21:45550876 . . 0 16 hm5C_associated_SNPs_14473 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45550869-45551037
64251 chr21 45550876 45550876 1 + C T rs9306175 45550882 + 45550862 45550902 41 CCTGGCCCCAGGAGCGGGGCCGTGTGAACGGTGATGAATGT CCTGGCCCCAGGAGTGGGGCCGTGTGAACGGTGATGAATGT < 41bp 1 0.578872037648864 1 0.299121677875519 experiment 0.842255924702273 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PWP2 ENSG00000241945 UTR3 Human protein_coding chr21:45550882 chr21:45550876 . . 0 15 hm5C_associated_SNPs_14474 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45550869-45551037
64251 chr21 45560133 45560133 1 + A T rs199921521 45560135 + 45560115 45560155 41 CTTTTGTCTCCCGGTAGGAGCACGTTTGCCGTGGACGGGAA CTTTTGTCTCCCGGTAGGTGCACGTTTGCCGTGGACGGGAA < 41bp 1 0.566040322725746 1 0.131549298763275 experiment 0.867919354548509 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560135 chr21:45560133 nonsynonymous SNV 0.761 2 19 hm5C_associated_SNPs_14475 0 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr21:45560116-45560133
64251 chr21 45560145 45560145 1 + G A rs17264865 45560135 + 45560115 45560155 41 CTTTTGTCTCCCGGTAGGAGCACGTTTGCCGTGGACGGGAA CTTTTGTCTCCCGGTAGGAGCACGTTTGCCATGGACGGGAA < 41bp 1 0.616842563452709 1 0.252911806106567 experiment 0.766314873094582 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560135 chr21:45560145 nonsynonymous SNV 0.821 3 31 hm5C_associated_SNPs_14476 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:45560131-45560153
64251 chr21 45560167 45560167 1 + T C rs146071545 45560184 + 45560164 45560204 41 AGGTGAATAAAGAAGTGGAGCGTGTCCTGAAGGAGTTCCAC AGGCGAATAAAGAAGTGGAGCGTGTCCTGAAGGAGTTCCAC < 41bp 1 0.266334338726641 1 0.22396457195282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560184 chr21:45560167 nonsynonymous SNV 0.003 4 4 hm5C_associated_SNPs_14477 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:45560137-45560170
64251 chr21 45733867 45733867 1 + A T rs1057037 45733862 + 45733842 45733882 41 TTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTT TTCATCCCCGAGGCTCCACCCGAGGTCGGCTGGGAGAACTT < 41bp 1 0.708290635712617 1 0.831601619720459 experiment 0.583418728574766 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45733862 chr21:45733867 nonsynonymous SNV 0.721 1 26 hm5C_associated_SNPs_14478 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45733854-45733885
64251 chr21 45736383 45736383 1 + G A rs9980790 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGACACCCTCTGCCTTCGACCGGA < 41bp 1 0.337114184600485 1 0.147743821144104 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736383 synonymous SNV . 0 22 hm5C_associated_SNPs_14479 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736383 45736383 1 + G A rs9980790 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGACACCCTCTGCCTTCGACCGGATC < 41bp 1 0.0939851795540332 1 0.100103437900543 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736383 synonymous SNV . 0 20 hm5C_associated_SNPs_14480 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736383 45736383 1 + G A rs9980790 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGACACCCTCTGCCTTCGACCGGATCC < 41bp 1 0.10625685228149 1 0.0492707490921021 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736383 synonymous SNV . 0 19 hm5C_associated_SNPs_14481 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736383 45736383 1 + G A rs9980790 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGACACCCTCTGCCTTCGACCGGATCCT < 41bp 1 0.466847069871732 1 0.481618613004684 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736383 synonymous SNV . 0 18 hm5C_associated_SNPs_14482 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736395 45736395 1 + C G rs139920536 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTGGACCGGA < 41bp 1 0.403751992907717 1 0.35181799530983 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736395 nonsynonymous SNV 0.570 5 34 hm5C_associated_SNPs_14483 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736395 45736395 1 + C G rs139920536 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTGGACCGGATC < 41bp 1 0.0912480020668787 1 0.130327850580215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736395 nonsynonymous SNV 0.570 5 32 hm5C_associated_SNPs_14484 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736395 45736395 1 + C G rs139920536 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGACGCCCTCTGCCTTGGACCGGATCC < 41bp 1 0.0786011268544399 1 0.126478672027588 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736395 nonsynonymous SNV 0.570 5 31 hm5C_associated_SNPs_14485 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736395 45736395 1 + C G rs139920536 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGACGCCCTCTGCCTTGGACCGGATCCT < 41bp 1 0.370977142621927 1 0.51266211271286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736395 nonsynonymous SNV 0.570 5 30 hm5C_associated_SNPs_14486 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45740045 45740045 1 + G A rs11908697 45740065 + 45740045 45740085 41 GGCGCCCACAGAGGGAGGAACGGGCTCAGTTATTCTGCAGC AGCGCCCACAGAGGGAGGAACGGGCTCAGTTATTCTGCAGC < 41bp 1 0.500817253516732 1 0.496525496244431 experiment 0.998365492966537 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PFKL ENSG00000141959 intronic Human protein_coding chr21:45740065 chr21:45740045 . . 0 1 hm5C_associated_SNPs_14487 0 0 3 PRPF8 POSTAR2 ENCODE chr21:45740028-45740069
64251 chr21 46713500 46713500 1 + G A rs78919055 46713488 + 46713468 46713508 41 TCTGGACTCATTGCGGAGTTCCACCCCTGCACGTTGCGGTT TCTGGACTCATTGCGGAGTTCCACCCCTGCACATTGCGGTT < 41bp 1 0.068357845981508 1 0.114769488573074 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC642852 ENSG00000223768 ncRNA_intronic Human lincRNA chr21:46713488 chr21:46713500 . . 0 33 hm5C_associated_SNPs_14490 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:46713500-46713520
64251 chr21 46888610 46888610 1 + G A rs534851819 46888598 + 46888578 46888618 41 TACGTGGACTGTGAGGAGTTCCAGAGAATGCCGCTTGCTCG TACGTGGACTGTGAGGAGTTCCAGAGAATGCCACTTGCTCG < 41bp 1 0.392037021506064 1 0.464513808488846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46888598 chr21:46888610 synonymous SNV . 0 33 hm5C_associated_SNPs_14491 0 0 5 FMR1 POSTAR2 ENCODE chr21:46888608-46888651
64251 chr21 46900410 46900410 1 + C T rs2236467 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTTTGGGGGCGATCTGGAGGCCCTGCGGGT < 41bp 1 0.0373459918126716 1 0.162252157926559 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900410 synonymous SNV . 0 15 hm5C_associated_SNPs_14493 1 0 6 FMR1 POSTAR2 ENCODE chr21:46900396-46900434
64251 chr21 46931109 46931109 1 + G A rs12483377 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCGGGGCACGCATCTTCTCCTTTAACGGCAAGGACGTCC < 41bp 1 0.04101942464833 1 0.346382081508636 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931109 nonsynonymous SNV 0.595 3 26 hm5C_associated_SNPs_14494 2 1 4 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr21 46931109 46931109 1 + G A rs12483377 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCGGGGCACGCATCTTCTCCTTTAACGGCAAGGACGTCCT < 41bp 1 0.118438262340799 1 0.190991878509521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931109 nonsynonymous SNV 0.595 3 25 hm5C_associated_SNPs_14495 2 1 4 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr21 47424502 47424502 1 + A G rs183666840 47424487 + 47424467 47424507 41 TCAAAGCAAGCTCTTCTCCTCAGCTTGGGGCAGCCATTGGC TCAAAGCAAGCTCTTCTCCTCAGCTTGGGGCAGCCGTTGGC < 41bp 1 0.373380410785778 1 0.32304510474205 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL6A1 ENSG00000142156 UTR3 Human protein_coding chr21:47424487 chr21:47424502 . . 0 36 hm5C_associated_SNPs_14496 1 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:47424469-47424544
64251 chr21 47754541 47754541 1 + A G rs61735824 47754537 + 47754517 47754557 41 GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATGT GTTCACAGTCAGTGACCACCCACCGGAACAGCGTGGGATGT < 41bp 1 0.52530557609166 1 0.440201908349991 experiment 0.949388847816679 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47754537 chr21:47754541 synonymous SNV . 0 25 hm5C_associated_SNPs_14498 2 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47754540-47754560
64251 chr21 47831309 47831309 1 + G A rs58559714 47831301 + 47831281 47831321 41 ACAGTCAGGCTGGCAGTCTGCAGAGCGAGCTGCTCTGCTCC ACAGTCAGGCTGGCAGTCTGCAGAGCGAACTGCTCTGCTCC < 41bp 1 0.46204611197901 1 0.871126115322113 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831301 chr21:47831309 synonymous SNV . 0 29 hm5C_associated_SNPs_14500 2 0 1 EFTUD2 POSTAR2 ENCODE chr21:47831274-47831327
64251 chr21 47831473 47831473 1 + A G rs536219610 47831456 + 47831436 47831476 41 CTGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGC CTGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGGGGC < 41bp 1 0.015334975171865 1 0.157186269760132 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831456 chr21:47831473 nonsynonymous SNV 0.149 1 38 hm5C_associated_SNPs_14501 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831473 47831473 1 + A G rs536219610 47831457 + 47831437 47831477 41 TGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCT TGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGGGGCT < 41bp 1 0.331611449460026 1 0.942121922969818 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831457 chr21:47831473 nonsynonymous SNV 0.149 1 37 hm5C_associated_SNPs_14502 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831473 47831473 1 + A G rs536219610 47831459 + 47831439 47831479 41 GAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGC GAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGGGGCTGC < 41bp 1 0.244450306744087 1 0.556354463100433 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831459 chr21:47831473 nonsynonymous SNV 0.149 1 35 hm5C_associated_SNPs_14503 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831473 47831473 1 + A G rs536219610 47831460 + 47831440 47831480 41 AGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCG AGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGGGGCTGCG < 41bp 1 0.452416312693512 1 0.846221327781677 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831460 chr21:47831473 nonsynonymous SNV 0.149 1 34 hm5C_associated_SNPs_14504 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831473 47831473 1 + A G rs536219610 47831465 + 47831445 47831485 41 CTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCGGAGCT CTGCAGCAGCGCCTCCAGGGCGCAGAGGGGGCTGCGGAGCT < 41bp 1 0.293074844606269 1 0.588641166687012 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831465 chr21:47831473 nonsynonymous SNV 0.149 1 29 hm5C_associated_SNPs_14505 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831480 47831480 1 + G A rs142278771 47831460 + 47831440 47831480 41 AGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCG AGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCA < 41bp 1 0.402162329298038 1 0.911603093147278 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831460 chr21:47831480 synonymous SNV . 0 41 hm5C_associated_SNPs_14506 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47831480 47831480 1 + G A rs142278771 47831465 + 47831445 47831485 41 CTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCGGAGCT CTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCAGAGCT < 41bp 1 0.248521590787571 1 0.556297361850739 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831465 chr21:47831480 synonymous SNV . 0 36 hm5C_associated_SNPs_14507 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:47831467-47831507
64251 chr21 47836411 47836411 1 + G A rs150756913 47836431 + 47836411 47836451 41 GACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACACTG AACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACACTG < 41bp 1 0.117486733290052 1 0.44178569316864 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47836431 chr21:47836411 synonymous SNV . 0 1 hm5C_associated_SNPs_14508 2 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47836321-47836426
64251 chr21 47836426 47836426 1 + T C rs57108405 47836431 + 47836411 47836451 41 GACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACACTG GACCAGCGTACTTGGCGGCTCCCGCCACCAGAGCCACACTG < 41bp 1 0.115740806908236 1 0.469164162874222 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47836431 chr21:47836426 synonymous SNV . 0 16 hm5C_associated_SNPs_14509 2 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47836321-47836426
64251 chr21 47836448 47836448 1 + A G rs9981448 47836431 + 47836411 47836451 41 GACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACACTG GACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACGCTG < 41bp 1 0.126045187023159 1 0.450048208236694 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47836431 chr21:47836448 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_14510 2 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:47836445-47836471
64251 chr21 47841989 47841989 1 + C T rs61735814 47842001 + 47841981 47842021 41 GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC GTTTCAGCTGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC < 41bp 1 0.0589906003150226 1 0.404620885848999 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47842001 chr21:47841989 nonsynonymous SNV 0.000 0 9 hm5C_associated_SNPs_14511 2 0 1 PRPF8 POSTAR2 ENCODE chr21:47841987-47842095
64251 chr21 47842018 47842018 1 + G A rs75024419 47842001 + 47841981 47842021 41 GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAATGC < 41bp 1 0.054644682748791 1 0.306631803512573 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47842001 chr21:47842018 nonsynonymous SNV 0.006 2 38 hm5C_associated_SNPs_14512 2 0 2 PRPF8 POSTAR2 ENCODE chr21:47841987-47842095
64251 chr21 47864716 47864716 1 + T C rs111389121 47864706 + 47864686 47864726 41 ATTCACCATTTAGAAGTGATCCAGCAAAGATTGGGAGGGGT ATTCACCATTTAGAAGTGATCCAGCAAAGACTGGGAGGGGT < 41bp 1 0.0590581093542597 1 0.414367079734802 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47864706 chr21:47864716 synonymous SNV . 0 31 hm5C_associated_SNPs_14513 2 0 2 DDX24 POSTAR2 ENCODE chr21:47864715-47864735
64251 chr21 47975907 47975907 1 + A G rs573139009 47975902 + 47975882 47975922 41 TCCTGTTTAACAGATGACATCCCAAAAAAGAAGATAGCAAG TCCTGTTTAACAGATGACATCCCAAGAAAGAAGATAGCAAG < 41bp 1 0.219842557769268 1 0.356637597084045 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47975902 chr21:47975907 nonsynonymous SNV 0.988 1 26 hm5C_associated_SNPs_14514 0 0 1 PPIG POSTAR2 ENCODE chr21:47975900-47975960
64251 chr21 47983806 47983806 1 + C G rs201790767 47983797 + 47983777 47983817 41 CCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG CCCGGCGTGAAGGTCATCATCGCACACACGGAGACCAAAGG < 41bp 1 0.307406097951424 1 0.224317967891693 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47983797 chr21:47983806 synonymous SNV . 0 30 hm5C_associated_SNPs_14515 0 0 4 BUD13 POSTAR2 ENCODE chr21:47983769-47983809
64251 chr21 48063447 48063447 1 + G A rs148794096 48063444 + 48063424 48063464 41 ACGCTTTCCTTGGCTTTGAGCAGGGAGAAGAGCCTGCTGAG ACGCTTTCCTTGGCTTTGAGCAGAGAGAAGAGCCTGCTGAG < 41bp 1 0.453228826020315 1 0.846452355384827 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48063444 chr21:48063447 nonsynonymous SNV 0.683 0 24 hm5C_associated_SNPs_14516 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:48063440-48063460
64251 chr22 17590498 17590498 1 + A G rs74827998 17590500 + 17590480 17590520 41 CAGTCTGACCAGGGCTACATCTCCAGGAGCTCCCCGCAGCC CAGTCTGACCAGGGCTACGTCTCCAGGAGCTCCCCGCAGCC < 41bp 1 0.798838821082813 1 0.985562562942505 experiment 0.402322357834374 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control IL17RA ENSG00000177663 CDS Human protein_coding chr22:17590500 chr22:17590498 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_14517 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:17590482-17590526
64251 chr22 18209613 18209613 1 + A G rs4488761 18209612 + 18209592 18209632 41 GAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACA GAGCTTACCTGTGTCACTGTCGGCTAGCCAGAGTTGGCACA < 41bp 1 0.708729952018354 1 0.291658043861389 experiment 0.582540095963292 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18209612 chr22:18209613 synonymous SNV . 0 22 hm5C_associated_SNPs_14518 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr22:18209602-18209623
64251 chr22 18979430 18979430 1 + G A rs534406602 18979435 + 18979415 18979455 41 AGGCCCGTCCTGGTGGAGTTCACCCTGCTGGAGATGGAGAA AGGCCCGTCCTGGTGAAGTTCACCCTGCTGGAGATGGAGAA < 41bp 1 0.241037448111589 1 0.273840039968491 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979435 chr22:18979430 . . 0 16 hm5C_associated_SNPs_14545 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:18979412-18979447
64251 chr22 19492948 19492948 1 + C T rs201188510 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CGGAATGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC < 41bp 1 0.40572679350793 1 0.120424568653107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492948 synonymous SNV . 0 6 hm5C_associated_SNPs_14547 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:19492940-19492960
64251 chr22 19706000 19706000 1 + G A rs577427065 19705998 + 19705978 19706018 41 CTCTGGCTCGGGTGCGGGAGCGGGGCCTGCCCGGACTGCGA CTCTGGCTCGGGTGCGGGAGCGAGGCCTGCCCGGACTGCGA < 41bp 1 0.682496874239526 1 0.930372714996338 experiment 0.635006251520948 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEPT5-GP1BB ENSG00000184702 UTR5 Human protein_coding chr22:19705998 chr22:19706000 . . 0 23 hm5C_associated_SNPs_14548 0 0 2 NONO POSTAR2 ENCODE chr22:19705994-19706025
64251 chr22 19710586 19710586 1 + C T rs75394242 19710572 + 19710552 19710592 41 GCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTCTCCACA GCAAGGAGCGGGGTCGTGACCGCTTACACCCCTTTTCCACA < 41bp 1 0.360889471765306 1 0.246580719947815 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SEPT5-GP1BB ENSG00000203618;ENSG00000184702 UTR5;UTR3 Human other chr22:19710572 chr22:19710586 . . 0 35 hm5C_associated_SNPs_14549 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:19710584-19710635
64251 chr22 19712064 19712064 1 + G C rs79998786 19712071 + 19712051 19712091 41 CAGGACCCTGCCCGAGGGGCCCTCGCGCCAACCTGGACCGG CAGGACCCTGCCCCAGGGGCCCTCGCGCCAACCTGGACCGG < 41bp 1 0.1037651513766 1 0.184128820896149 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEPT5-GP1BB ENSG00000184702;ENSG00000203618 UTR3 Human other chr22:19712071 chr22:19712064 . . 0 14 hm5C_associated_SNPs_14550 0 0 1 DDX55 POSTAR2 ENCODE chr22:19712057-19712158
64251 chr22 19929310 19929310 1 + A C rs571085983 19929327 + 19929307 19929347 41 GCCACCGCCATTGCCGCCATCGTCGTGGGGCTTCTGGGGCA GCCCCCGCCATTGCCGCCATCGTCGTGGGGCTTCTGGGGCA < 41bp 1 0.638690415954597 1 0.670981585979462 experiment 0.722619168090806 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TXNRD2 ENSG00000184470 CDS Human protein_coding chr22:19929327 chr22:19929310 nonsynonymous SNV 0.874 0 4 hm5C_associated_SNPs_14551 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr22:19929287-19929313
64251 chr22 19939082 19939082 1 + C T rs140215652 19939081 + 19939061 19939101 41 CGCTGTGTACACTGTGTGCTCCGGTTGTTGCATCCGAGGGT CGCTGTGTACACTGTGTGCTCTGGTTGTTGCATCCGAGGGT < 41bp 1 0.4354026011675 1 0.532157421112061 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control COMT ENSG00000093010 UTR5 Human protein_coding chr22:19939081 chr22:19939082 . . 0 22 hm5C_associated_SNPs_14552 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19939042-19939101
64251 chr22 19939083 19939083 1 + G A rs191619546 19939081 + 19939061 19939101 41 CGCTGTGTACACTGTGTGCTCCGGTTGTTGCATCCGAGGGT CGCTGTGTACACTGTGTGCTCCAGTTGTTGCATCCGAGGGT < 41bp 1 0.160623980200484 1 0.566509604454041 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control COMT ENSG00000093010 UTR5 Human protein_coding chr22:19939081 chr22:19939083 . . 0 23 hm5C_associated_SNPs_14553 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19939042-19939101
64251 chr22 19939096 19939096 1 + G A rs739368 19939081 + 19939061 19939101 41 CGCTGTGTACACTGTGTGCTCCGGTTGTTGCATCCGAGGGT CGCTGTGTACACTGTGTGCTCCGGTTGTTGCATCCAAGGGT < 41bp 1 0.232160190416575 1 0.738495051860809 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control COMT ENSG00000093010 UTR5 Human protein_coding chr22:19939081 chr22:19939096 . . 0 36 hm5C_associated_SNPs_14554 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19939042-19939101
64251 chr22 19950040 19950040 1 + C T rs199755426 19950043 + 19950023 19950063 41 TGGCGCCCCTCCCCTCCCGCCCTGCAGATGCCGGAGGCCCC TGGCGCCCCTCCCCTCCTGCCCTGCAGATGCCGGAGGCCCC < 41bp 1 0.0350200993665402 1 0.269338488578796 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COMT ENSG00000093010 UTR5 Human protein_coding chr22:19950043 chr22:19950040 . . 0 18 hm5C_associated_SNPs_14555 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:19950040-19950060
64251 chr22 20052327 20052327 1 + C T rs544274351 20052334 + 20052314 20052354 41 GCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCC GCCCTGTGGTTTGTGTGTTACCCATCTGTGTCCCCATGCCC < 41bp 1 0.103657858330313 1 0.0290983319282532 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TANGO2 ENSG00000268292 ncRNA_exonic Human antisense chr22:20052334 chr22:20052327 . . 0 14 hm5C_associated_SNPs_14556 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:20052307-20052328
64251 chr22 20097827 20097827 1 + G A rs181232565 20097831 + 20097811 20097851 41 ACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCC ACACATGTGGAGCAGCAGCTCTCCCTGGAAAGCTCCAGGCC < 41bp 1 0.621765020904753 1 0.626917719841003 experiment 0.756469958190495 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DGCR8 ENSG00000128191 UTR3 Human protein_coding chr22:20097831 chr22:20097827 . . 0 17 hm5C_associated_SNPs_14557 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:20097778-20097840
64251 chr22 20748544 20748544 1 + C T rs140074587 20748525 + 20748505 20748545 41 TTGCCGGTCCCTCAGACCGTCGGCGGTCTCTGTCCGCTTCG TTGCCGGTCCCTCAGACCGTCGGCGGTCTCTGTCCGCTTTG < 41bp 1 0.653087827110815 1 0.41402542591095 experiment 0.69382434577837 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF74 ENSG00000185252 UTR5 Human protein_coding chr22:20748525 chr22:20748544 . . 0 40 hm5C_associated_SNPs_14558 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:20748495-20748550
64251 chr22 20861902 20861902 1 + T A rs116476024 20861899 + 20861879 20861919 41 GCTTCCGGGTTTGGGCCTGGCTCTGTGACTGAGGCGGCGGC GCTTCCGGGTTTGGGCCTGGCTCAGTGACTGAGGCGGCGGC < 41bp 1 0.709960774754036 1 0.202856361865997 experiment 0.580078450491928 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED15 ENSG00000099917 UTR5 Human protein_coding chr22:20861899 chr22:20861902 . . 0 24 hm5C_associated_SNPs_14559 0 0 3 GEMIN5 POSTAR2 ENCODE chr22:20861891-20862049
64251 chr22 21305049 21305049 1 + G A rs57573660 21305056 + 21305036 21305076 41 GTTGGGTTTTTATGATAGTGCAAGGAATGACTCATGCCTCT GTTGGGTTTTTATAATAGTGCAAGGAATGACTCATGCCTCT < 41bp 1 0.681825444379902 1 0.268046230077744 experiment 0.636349111240196 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21305056 chr22:21305049 . . 0 14 hm5C_associated_SNPs_14560 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:21304961-21305186
64251 chr22 21305834 21305834 1 + C A rs561400042 21305824 + 21305804 21305844 41 TGCAATTCAGTCTGCTCTCCCTTGTGGACCCTGGTAAAGAA TGCAATTCAGTCTGCTCTCCCTTGTGGACCATGGTAAAGAA < 41bp 1 0.388879536770574 1 0.0727082490921021 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21305824 chr22:21305834 . . 0 31 hm5C_associated_SNPs_14561 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:21305763-21305896
64251 chr22 21306194 21306194 1 + C T rs189274432 21306193 + 21306173 21306213 41 CTTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGT CTTGCCAGTGAGAACGGTGACTGCCTCCTGCTCTGCACGGT < 41bp 1 0.56820166000014 1 0.0631892383098602 experiment 0.863596679999721 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRKL ENSG00000099942 UTR3 Human protein_coding chr22:21306193 chr22:21306194 . . 0 22 hm5C_associated_SNPs_14562 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:21306161-21306296
64251 chr22 21801280 21801280 1 + G A rs41282577 21801265 + 21801245 21801285 41 ACCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGC ACCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCAGGGGC < 41bp 1 0.0692711487220487 1 0.0673350095748901 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801265 chr22:21801280 . . 0 36 hm5C_associated_SNPs_14563 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801266 + 21801246 21801286 41 CCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCC CCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCAGGGGCC < 41bp 1 0.315433051931277 1 0.310513079166412 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801266 chr22:21801280 . . 0 35 hm5C_associated_SNPs_14564 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801267 + 21801247 21801287 41 CTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCA CTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCAGGGGCCA < 41bp 1 0.219616882445572 1 0.0483757257461548 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801267 chr22:21801280 . . 0 34 hm5C_associated_SNPs_14565 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801268 + 21801248 21801288 41 TCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCAC TCCCCATCCCACCCAGGCCCCCAGCTCCCCGCAGGGGCCAC < 41bp 1 0.225223298839852 1 0.162787199020386 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801268 chr22:21801280 . . 0 33 hm5C_associated_SNPs_14566 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801269 + 21801249 21801289 41 CCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCACC CCCCATCCCACCCAGGCCCCCAGCTCCCCGCAGGGGCCACC < 41bp 1 0.40354303347359 1 0.164631754159927 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801269 chr22:21801280 . . 0 32 hm5C_associated_SNPs_14567 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801285 + 21801265 21801305 41 CCCCCAGCTCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCT CCCCCAGCTCCCCGCAGGGGCCACCGCAGGGCCTGTGGGCT < 41bp 1 0.111087655861283 1 0.168936431407928 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801285 chr22:21801280 . . 0 16 hm5C_associated_SNPs_14568 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801280 21801280 1 + G A rs41282577 21801286 + 21801266 21801306 41 CCCCAGCTCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTG CCCCAGCTCCCCGCAGGGGCCACCGCAGGGCCTGTGGGCTG < 41bp 1 0.725505499086611 1 0.114173978567123 experiment 0.548989001826779 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801286 chr22:21801280 . . 0 15 hm5C_associated_SNPs_14569 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801265 + 21801245 21801285 41 ACCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGC ACCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGCGGC < 41bp 1 0.0796602191139088 1 0.0515942871570587 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801265 chr22:21801282 . . 0 38 hm5C_associated_SNPs_14570 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801266 + 21801246 21801286 41 CCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCC CCTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGCGGCC < 41bp 1 0.332881882126071 1 0.174740314483643 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801266 chr22:21801282 . . 0 37 hm5C_associated_SNPs_14571 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801267 + 21801247 21801287 41 CTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCA CTCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGCGGCCA < 41bp 1 0.255189822962536 1 0.0557292401790619 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801267 chr22:21801282 . . 0 36 hm5C_associated_SNPs_14572 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801268 + 21801248 21801288 41 TCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCAC TCCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGCGGCCAC < 41bp 1 0.241992500685919 1 0.256282925605774 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801268 chr22:21801282 . . 0 35 hm5C_associated_SNPs_14573 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801269 + 21801249 21801289 41 CCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGGGGCCACC CCCCATCCCACCCAGGCCCCCAGCTCCCCGCGGCGGCCACC < 41bp 1 0.436502744089409 1 0.224974721670151 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801269 chr22:21801282 . . 0 34 hm5C_associated_SNPs_14574 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801285 + 21801265 21801305 41 CCCCCAGCTCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCT CCCCCAGCTCCCCGCGGCGGCCACCGCAGGGCCTGTGGGCT < 41bp 1 0.116454168457471 1 0.358016133308411 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801285 chr22:21801282 . . 0 18 hm5C_associated_SNPs_14575 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21801282 21801282 1 + G C rs539310648 21801286 + 21801266 21801306 41 CCCCAGCTCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTG CCCCAGCTCCCCGCGGCGGCCACCGCAGGGCCTGTGGGCTG < 41bp 1 0.732038148158841 1 0.298151910305023 experiment 0.535923703682318 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801286 chr22:21801282 . . 0 17 hm5C_associated_SNPs_14576 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21801280-21801300
64251 chr22 21996615 21996615 1 + G A rs375468896 21996599 + 21996579 21996619 41 GACGGAAGCGGCCCCTGGGCCCGAGGGGCTGGAGCCGGGCC GACGGAAGCGGCCCCTGGGCCCGAGGGGCTGGAGCCAGGCC < 41bp 1 0.698901199946965 1 0.626991152763367 experiment 0.602197600106069 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SDF2L1 ENSG00000128228 UTR5 Human protein_coding chr22:21996599 chr22:21996615 . . 0 37 hm5C_associated_SNPs_14577 0 0 4 DDX3X POSTAR2 ENCODE chr22:21996596-21996615
64251 chr22 22025325 22025325 1 + C T rs149000654 22025316 + 22025296 22025336 41 CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGT CAGCCCTTTGTCTACCCAGTCTGCACTCCTGATGGCATCGT < 41bp 1 0.50012394525425 1 0.511126458644867 experiment 0.999752109491499 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22025316 chr22:22025325 synonymous SNV . 0 30 hm5C_associated_SNPs_14578 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:22025279-22025345
64251 chr22 22040816 22040816 1 + C T rs201566623 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACCTCCACTGCGATGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.262480537743225 1 0.320139706134796 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040816 synonymous SNV . 0 12 hm5C_associated_SNPs_14579 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr22 22050304 22050304 1 + T A rs190466719 22050296 + 22050276 22050316 41 GTATATGTCTGGTTTTCTTACCCCTACTTCTGTCATCTTCT GTATATGTCTGGTTTTCTTACCCCTACTACTGTCATCTTCT < 41bp 1 0.08351372233864 1 0.181136906147003 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPIL2 ENSG00000100023 UTR3 Human protein_coding chr22:22050296 chr22:22050304 . . 0 29 hm5C_associated_SNPs_14580 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:22050258-22050314
64251 chr22 23523644 23523644 1 + G A rs148370562 23523630 + 23523610 23523650 41 AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGACCAGCC < 41bp 1 0.540444517623605 1 0.0527338087558746 experiment 0.919110964752789 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23523630 chr22:23523644 nonsynonymous SNV 0.262 1 35 hm5C_associated_SNPs_14582 0 0 9 DDX24 POSTAR2 ENCODE chr22:23523634-23523709
64251 chr22 23596134 23596134 1 + G A rs139201536 23596125 + 23596105 23596145 41 AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTCTCGGG AGCAGCAAGGGCAGGGGCAGCCGGGATGCACTGGTCTCGGG < 41bp 1 0.640437706768225 1 0.744072139263153 experiment 0.71912458646355 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23596125 chr22:23596134 synonymous SNV . 0 30 hm5C_associated_SNPs_14583 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23596122-23596160
64251 chr22 23656249 23656249 1 + C T rs544916353 23656252 + 23656232 23656272 41 TTCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTC TTCCTTTTCCTTCTGGATCACCTGAAAAGGTAGCCCAGCTC < 41bp 1 0.189682452096358 1 0.519204676151276 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656252 chr22:23656249 synonymous SNV . 0 18 hm5C_associated_SNPs_14584 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23656217-23656253
64251 chr22 23656249 23656249 1 + C T rs544916353 23656253 + 23656233 23656273 41 TCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTCT TCCTTTTCCTTCTGGATCACCTGAAAAGGTAGCCCAGCTCT < 41bp 1 0.445942726177877 1 0.427864342927933 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656253 chr22:23656249 synonymous SNV . 0 17 hm5C_associated_SNPs_14585 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23656217-23656253
64251 chr22 24224655 24224655 1 + G A rs9608213 24224648 + 24224628 24224668 41 CCCTCCTCCCTGGCTCAGCACTACGGCGGCTCCGGGGCTCC CCCTCCTCCCTGGCTCAGCACTACGGCAGCTCCGGGGCTCC < 41bp 1 0.589850901559092 1 0.25772613286972 experiment 0.820298196881816 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24224648 chr22:24224655 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_14587 0 0 1 XRN2 POSTAR2 ENCODE chr22:24224608-24224737
64251 chr22 24224659 24224659 1 + C A rs9612499 24224648 + 24224628 24224668 41 CCCTCCTCCCTGGCTCAGCACTACGGCGGCTCCGGGGCTCC CCCTCCTCCCTGGCTCAGCACTACGGCGGCTACGGGGCTCC < 41bp 1 0.613669904315448 1 0.179704993963242 experiment 0.772660191369103 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24224648 chr22:24224659 synonymous SNV . 0 32 hm5C_associated_SNPs_14588 0 0 2 SRSF1 POSTAR2 ENCODE chr22:24224657-24224771
64251 chr22 24224668 24224668 1 + C T rs368660150 24224648 + 24224628 24224668 41 CCCTCCTCCCTGGCTCAGCACTACGGCGGCTCCGGGGCTCC CCCTCCTCCCTGGCTCAGCACTACGGCGGCTCCGGGGCTCT < 41bp 1 0.567295991127801 1 0.289566934108734 experiment 0.865408017744398 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24224648 chr22:24224668 synonymous SNV . 0 41 hm5C_associated_SNPs_14589 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24224664-24224686
64251 chr22 24226520 24226520 1 + G A rs36026871 24226534 + 24226514 24226554 41 AGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGG AGAGCTATTTGACCAGATGGCCAGGCCTGCTGCCTGCATGG < 41bp 1 0.430472455576942 1 0.305373936891556 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226534 chr22:24226520 synonymous SNV . 0 7 hm5C_associated_SNPs_14590 0 0 1 PPIG POSTAR2 ENCODE chr22:24226487-24226531
64251 chr22 24237108 24237108 1 + G A rs201099096 24237096 + 24237076 24237116 41 TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCG TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAACGCCTGCG < 41bp 1 0.129238392743023 1 0.112756580114365 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237096 chr22:24237108 nonsynonymous SNV 0.973 0 33 hm5C_associated_SNPs_14591 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237108 24237108 1 + G A rs201099096 24237109 + 24237089 24237129 41 TGTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGAC TGTGCGGCCTGCTGGCCGAACGCCTGCGCATCAGCCCGGAC < 41bp 1 0.638250015727583 1 0.264285147190094 experiment 0.723499968544835 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237109 chr22:24237108 nonsynonymous SNV 0.973 0 20 hm5C_associated_SNPs_14592 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237108 24237108 1 + G A rs201099096 24237117 + 24237097 24237137 41 CTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGC CTGCTGGCCGAACGCCTGCGCATCAGCCCGGACAGGTACGC < 41bp 1 0.533758061951313 1 0.121350705623627 experiment 0.932483876097373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237117 chr22:24237108 nonsynonymous SNV 0.973 0 12 hm5C_associated_SNPs_14593 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237108 24237108 1 + G A rs201099096 24237120 + 24237100 24237140 41 CTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGCGGA CTGGCCGAACGCCTGCGCATCAGCCCGGACAGGTACGCGGA < 41bp 1 0.50926173819814 1 0.34735170006752 experiment 0.98147652360372 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237120 chr22:24237108 nonsynonymous SNV 0.973 0 9 hm5C_associated_SNPs_14594 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237112 24237112 1 + C T rs34733430 24237096 + 24237076 24237116 41 TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCG TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCTTGCG < 41bp 1 0.112299141715016 1 0.0952074825763702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237096 chr22:24237112 synonymous SNV . 0 37 hm5C_associated_SNPs_14595 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237112 24237112 1 + C T rs34733430 24237109 + 24237089 24237129 41 TGTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGAC TGTGCGGCCTGCTGGCCGAGCGCTTGCGCATCAGCCCGGAC < 41bp 1 0.394429777111567 1 0.072258323431015 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237109 chr22:24237112 synonymous SNV . 0 24 hm5C_associated_SNPs_14596 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237112 24237112 1 + C T rs34733430 24237117 + 24237097 24237137 41 CTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGC CTGCTGGCCGAGCGCTTGCGCATCAGCCCGGACAGGTACGC < 41bp 1 0.615103551641546 1 0.255634903907776 experiment 0.769792896716908 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237117 chr22:24237112 synonymous SNV . 0 16 hm5C_associated_SNPs_14597 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237112 24237112 1 + C T rs34733430 24237120 + 24237100 24237140 41 CTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGCGGA CTGGCCGAGCGCTTGCGCATCAGCCCGGACAGGTACGCGGA < 41bp 1 0.560770782883328 1 0.28345662355423 experiment 0.878458434233344 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237120 chr22:24237112 synonymous SNV . 0 13 hm5C_associated_SNPs_14598 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24468448 24468448 1 + C T rs142541555 24468439 + 24468419 24468459 41 CTCTGTGCCACCAGCAGCAGCTCCAAAACCCAGCGGAGGAA CTCTGTGCCACCAGCAGCAGCTCCAAAACTCAGCGGAGGAA < 41bp 1 0.35668123214321 1 0.862331748008728 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24468439 chr22:24468448 nonsynonymous SNV 0.996 0 30 hm5C_associated_SNPs_14609 0 0 1 PPIG POSTAR2 ENCODE chr22:24468389-24468450
64251 chr22 24584744 24584744 1 + C T rs148053656 24584732 + 24584712 24584752 41 CAGATTCCAATAGCTCACTCCCTAGAGCCTGACGCCGGGGC CAGATTCCAATAGCTCACTCCCTAGAGCCTGATGCCGGGGC < 41bp 1 0.0949758512292706 1 0.56904923915863 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUSD2 ENSG00000099994 UTR3 Human protein_coding chr22:24584732 chr22:24584744 . . 0 33 hm5C_associated_SNPs_14610 0 0 6 DDX55 POSTAR2 ENCODE chr22:24584738-24584858
64251 chr22 24584751 24584751 1 + G A rs552379112 24584732 + 24584712 24584752 41 CAGATTCCAATAGCTCACTCCCTAGAGCCTGACGCCGGGGC CAGATTCCAATAGCTCACTCCCTAGAGCCTGACGCCGGGAC < 41bp 1 0.0951101028176674 1 0.509015202522278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUSD2 ENSG00000099994 UTR3 Human protein_coding chr22:24584732 chr22:24584751 . . 0 40 hm5C_associated_SNPs_14611 0 0 6 DDX55 POSTAR2 ENCODE chr22:24584738-24584858
64251 chr22 24666823 24666823 1 + C G rs200323422 24666822 + 24666802 24666842 41 CGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGCTGCGGGG CGCGAGGGAGGCCGGGCGGCCGGGCAAGCGGCGCTGCGGGG < 41bp 1 0.724145208019465 1 0.796670079231262 experiment 0.55170958396107 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPECC1L-ADORA2A ENSG00000100014 UTR5 Human protein_coding chr22:24666822 chr22:24666823 . . 0 22 hm5C_associated_SNPs_14612 0 0 2 DDX3X POSTAR2 ENCODE chr22:24666803-24666913
64251 chr22 24666835 24666835 1 + C G rs5760299 24666822 + 24666802 24666842 41 CGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGCTGCGGGG CGCGAGGGAGGCCGGGCGGCCCGGCAAGCGGCGGTGCGGGG < 41bp 1 0.40652602286835 1 0.646512508392334 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPECC1L-ADORA2A ENSG00000100014 UTR5 Human protein_coding chr22:24666822 chr22:24666835 . . 0 34 hm5C_associated_SNPs_14613 0 0 2 DDX3X POSTAR2 ENCODE chr22:24666803-24666913
64251 chr22 24811855 24811855 1 + T G rs368701071 24811875 + 24811855 24811895 41 TTTTTGGGAATAGGGATCTCCCGTGTGCCTAACGCAGTAGC GTTTTGGGAATAGGGATCTCCCGTGTGCCTAACGCAGTAGC < 41bp 1 0.170727165140626 1 0.373452067375183 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPECC1L-ADORA2A ENSG00000100014 UTR3 Human protein_coding chr22:24811875 chr22:24811855 . . 0 1 hm5C_associated_SNPs_14614 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:24811770-24811863
64251 chr22 24813374 24813374 1 + C A rs544258977 24813358 + 24813338 24813378 41 TGTGGCCCTACCCCAAGGCGCACTTCCTCATGTGGGCAGAT TGTGGCCCTACCCCAAGGCGCACTTCCTCATGTGGGAAGAT < 41bp 1 0.133559272024953 1 0.0125558078289032 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPECC1L-ADORA2A ENSG00000100014 UTR3 Human protein_coding chr22:24813358 chr22:24813374 . . 0 37 hm5C_associated_SNPs_14615 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:24813359-24813384
64251 chr22 25570285 25570285 1 + C T rs56351192 25570299 + 25570279 25570319 41 TCTGTCCTCCCAAACGGAGCCCACCTCGGCAGGGGACCAGT TCTGTCTTCCCAAACGGAGCCCACCTCGGCAGGGGACCAGT < 41bp 1 0.0284432098056824 1 0.0685781240463257 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1671 ENSG00000197077 CDS Human protein_coding chr22:25570299 chr22:25570285 synonymous SNV . 0 7 hm5C_associated_SNPs_14619 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr22:25570275-25570306
64251 chr22 26291145 26291145 1 + C T rs118112071 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACGAGTGGCAGATGCGCTTTGACTGTGCTCAGATG < 41bp 1 0.123594414615821 1 0.3464615046978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291145 synonymous SNV . 0 26 hm5C_associated_SNPs_14621 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr22 29184245 29184245 1 + T C rs568694373 29184234 + 29184214 29184254 41 GCCATTTGATAAACTTCTGCCTTGTAGTCATTGTTTGATGG GCCATTTGATAAACTTCTGCCTTGTAGTCATCGTTTGATGG < 41bp 1 0.170671070498206 1 0.0458030998706818 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC117 ENSG00000159873 UTR3 Human protein_coding chr22:29184234 chr22:29184245 . . 0 32 hm5C_associated_SNPs_14623 0 0 20 TARDBP POSTAR2 DRA001158,DRS012386 chr22:29184158-29184259
64251 chr22 29533437 29533437 1 + C T rs61752343 29533451 + 29533431 29533471 41 ACCATCCGGGTTCCGGGGGCCTCCCACATCCACTTCAGCTT ACCATCTGGGTTCCGGGGGCCTCCCACATCCACTTCAGCTT < 41bp 1 0.203720532361496 1 0.147630751132965 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533451 chr22:29533437 nonsynonymous SNV 0.987 1 7 hm5C_associated_SNPs_14625 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:29533423-29533439
64251 chr22 29541794 29541794 1 + C T rs73397005 29541791 + 29541771 29541811 41 GAGTGGGCTCTGGCTCAAGACTCCAATCGGCCAGAAGCCCA GAGTGGGCTCTGGCTCAAGACTCTAATCGGCCAGAAGCCCA < 41bp 1 0.59553079910441 1 0.739791989326477 experiment 0.808938401791181 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KREMEN1 ENSG00000183762 UTR3 Human protein_coding chr22:29541791 chr22:29541794 . . 0 24 hm5C_associated_SNPs_14629 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29541789-29541814
64251 chr22 29541801 29541801 1 + C A rs146853863 29541791 + 29541771 29541811 41 GAGTGGGCTCTGGCTCAAGACTCCAATCGGCCAGAAGCCCA GAGTGGGCTCTGGCTCAAGACTCCAATCGGACAGAAGCCCA < 41bp 1 0.78867275307948 1 0.959040343761444 experiment 0.422654493841041 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KREMEN1 ENSG00000183762 UTR3 Human protein_coding chr22:29541791 chr22:29541801 . . 0 31 hm5C_associated_SNPs_14630 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29541789-29541814
64251 chr22 29664281 29664281 1 + C A rs111892587 29664296 + 29664276 29664316 41 GAAAGCGAGAGGGAGACGGACGTTGAGAGAACGAGGAGGAA GAAAGAGAGAGGGAGACGGACGTTGAGAGAACGAGGAGGAA < 41bp 1 0.306083190378327 1 0.154985696077347 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 UTR5 Human protein_coding chr22:29664296 chr22:29664281 . . 0 6 hm5C_associated_SNPs_14631 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:29664260-29664300
64251 chr22 29695761 29695761 1 + C T rs111270799 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG TCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG < 41bp 1 0.440743109158907 1 0.225459575653076 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695761 synonymous SNV . 0 1 hm5C_associated_SNPs_14632 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr22 30422910 30422910 1 + A G rs113914050 30422914 + 30422894 30422934 41 GCAGTCCCCCTTTGCCACTCCTGGCTGTCTGAGTGGGCACT GCAGTCCCCCTTTGCCGCTCCTGGCTGTCTGAGTGGGCACT < 41bp 1 0.184794572077015 1 0.0481144189834595 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HORMAD2-AS1 ENSG00000227117 ncRNA_intronic Human antisense chr22:30422914 chr22:30422910 . . 0 17 hm5C_associated_SNPs_14634 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:30422868-30422921
64251 chr22 31795604 31795604 1 + G T rs368688522 31795595 + 31795575 31795615 41 GCGCCTGCGTGCTGCAGTAGCGCCTGGTGGCGGTGGCAGTT GCGCCTGCGTGCTGCAGTAGCGCCTGGTGTCGGTGGCAGTT < 41bp 1 0.696409171693618 1 0.196548312902451 experiment 0.607181656612763 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DRG1 ENSG00000185721 UTR5 Human protein_coding chr22:31795595 chr22:31795604 . . 0 30 hm5C_associated_SNPs_14638 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr22:31795580-31795640
64251 chr22 31795604 31795604 1 + G T rs368688522 31795598 + 31795578 31795618 41 CCTGCGTGCTGCAGTAGCGCCTGGTGGCGGTGGCAGTTTGC CCTGCGTGCTGCAGTAGCGCCTGGTGTCGGTGGCAGTTTGC < 41bp 1 0.759000662476913 1 0.435756385326385 experiment 0.481998675046174 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DRG1 ENSG00000185721 UTR5 Human protein_coding chr22:31795598 chr22:31795604 . . 0 27 hm5C_associated_SNPs_14639 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr22:31795580-31795640
64251 chr22 31795604 31795604 1 + G T rs368688522 31795611 + 31795591 31795631 41 GTAGCGCCTGGTGGCGGTGGCAGTTTGCCCGCGGGTGTGTG GTAGCGCCTGGTGTCGGTGGCAGTTTGCCCGCGGGTGTGTG < 41bp 1 0.440352538059648 1 0.287464886903763 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DRG1 ENSG00000185721 UTR5 Human protein_coding chr22:31795611 chr22:31795604 . . 0 14 hm5C_associated_SNPs_14640 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr22:31795580-31795640
64251 chr22 32174124 32174124 1 + C T rs558913954 32174133 + 32174113 32174153 41 AATGAGAAGGTCATGTGTGGCTACATCAGTGAAGATACCAG AATGAGAAGGTTATGTGTGGCTACATCAGTGAAGATACCAG < 41bp 1 0.459168788039121 1 0.84168815612793 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32174133 chr22:32174124 synonymous SNV . 0 12 hm5C_associated_SNPs_14642 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:32174112-32174144
64251 chr22 32270378 32270378 1 + T C rs200653339 32270365 + 32270345 32270385 41 ACGTGGAGGGGATCCAGACACAGGCGATGGCCATTGACATC ACGTGGAGGGGATCCAGACACAGGCGATGGCCACTGACATC < 41bp 1 0.792665507055749 1 0.797414898872375 experiment 0.414668985888503 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32270365 chr22:32270378 nonsynonymous SNV 0.993 0 34 hm5C_associated_SNPs_14644 1 0 1 PRPF8 POSTAR2 ENCODE chr22:32270346-32270429
64251 chr22 32870893 32870893 1 + C T rs531209490 32870900 + 32870880 32870920 41 GGTAGTCGCCAGTCCGGGGTCGTCGCCGTTTGGGGCGGGAG GGTAGTCGCCAGTTCGGGGTCGTCGCCGTTTGGGGCGGGAG < 41bp 1 0.499956267183756 1 0.487345695495605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXO7 ENSG00000100225 UTR5 Human protein_coding chr22:32870900 chr22:32870893 . . 0 14 hm5C_associated_SNPs_14645 0 0 11 EIF3B POSTAR2 GSE65004,GSM1585667 chr22:32870842-32870904
64251 chr22 32889249 32889249 1 + A G rs147911892 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTGTATCTGCGTGATTTTCGAGGTGAT < 41bp 1 0.547177859671872 1 0.289457559585571 experiment 0.905644280656256 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889249 synonymous SNV . 0 17 hm5C_associated_SNPs_14646 1 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32889222-32889255
64251 chr22 33197871 33197871 1 + G A rs191293675 33197890 + 33197870 33197910 41 GGTTGCCCCGCACGGCCCGGCGGGCGAGCGAGCTCGGGCTG GATTGCCCCGCACGGCCCGGCGGGCGAGCGAGCTCGGGCTG < 41bp 1 0.748732876876929 1 0.806392669677734 experiment 0.502534246246141 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TIMP3 ENSG00000100234 UTR5 Human protein_coding chr22:33197890 chr22:33197871 . . 0 2 hm5C_associated_SNPs_14647 1 0 6 DDX3X POSTAR2 ENCODE chr22:33197846-33197940
64251 chr22 35653490 35653490 1 + C G rs572271261 35653508 + 35653488 35653528 41 CTCCTTCTCCAAGATGGCGGCGATCGGCGGCGTTGAGGCGG CTGCTTCTCCAAGATGGCGGCGATCGGCGGCGTTGAGGCGG < 41bp 1 0.29597252180207 1 0.3313148021698 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGXB4 ENSG00000100281 UTR5 Human protein_coding chr22:35653508 chr22:35653490 . . 0 3 hm5C_associated_SNPs_14648 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:35653480-35653500
64251 chr22 35653521 35653521 1 + T A rs554503605 35653508 + 35653488 35653528 41 CTCCTTCTCCAAGATGGCGGCGATCGGCGGCGTTGAGGCGG CTCCTTCTCCAAGATGGCGGCGATCGGCGGCGTAGAGGCGG < 41bp 1 0.264231753012703 1 0.317162930965424 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGXB4 ENSG00000100281 UTR5 Human protein_coding chr22:35653508 chr22:35653521 . . 0 34 hm5C_associated_SNPs_14649 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:35653500-35653522
64251 chr22 35690532 35690532 1 + A G rs4821392 35690531 + 35690511 35690551 41 GATTTTTGGGTTCATCTTATCAGTTCCCCTGGTGGGCAGAT GATTTTTGGGTTCATCTTATCGGTTCCCCTGGTGGGCAGAT < 41bp 1 0.396874827252278 1 0.235664695501328 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HMGXB4 ENSG00000100281 UTR3 Human protein_coding chr22:35690531 chr22:35690532 . . 0 22 hm5C_associated_SNPs_14650 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:35690520-35690540
64251 chr22 37962126 37962126 1 + T A rs138215550 37962123 + 37962103 37962143 41 TGCCGACCACCTCGGGGGTGCTTTCTCTGCGCTTGAACATC TGCCGACCACCTCGGGGGTGCTTACTCTGCGCTTGAACATC < 41bp 1 0.037170168494517 1 0.0349476635456085 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC42EP1 ENSG00000128283 UTR5 Human protein_coding chr22:37962123 chr22:37962126 . . 0 24 hm5C_associated_SNPs_14669 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585671 chr22:37962107-37962130
64251 chr22 38021889 38021889 1 + C T rs147657157 38021903 + 38021883 38021923 41 CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG CCCTGGTGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG < 41bp 1 0.639292278616606 1 0.0991578996181488 experiment 0.721415442766788 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021903 chr22:38021889 synonymous SNV . 0 7 hm5C_associated_SNPs_14671 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38021837-38021905
64251 chr22 38028073 38028073 1 + A G rs12170061 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TCCATTTTGCCCGGGACCCGCTGCCAGGGCGCTCCGACGTG < 41bp 1 0.361846852201944 1 0.070324182510376 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028073 synonymous SNV . 0 20 hm5C_associated_SNPs_14672 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:38028045-38028079
64251 chr22 38028076 38028076 1 + G T rs193147072 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TCCATTTTGCCCGGGACCCACTTCCAGGGCGCTCCGACGTG < 41bp 1 0.157977999951002 1 0.0561263561248779 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028076 synonymous SNV . 0 23 hm5C_associated_SNPs_14673 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:38028045-38028079
64251 chr22 38028942 38028942 1 + C A rs11913963 38028959 + 38028939 38028979 41 TGCCGCTGGGGTCTCCATCACCGGGACCTGGAGAGGGAGGG TGCAGCTGGGGTCTCCATCACCGGGACCTGGAGAGGGAGGG < 41bp 1 0.639532439117662 1 0.834700524806976 experiment 0.720935121764676 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control GGA1 ENSG00000100083 UTR3 Human protein_coding chr22:38028959 chr22:38028942 . . 0 4 hm5C_associated_SNPs_14674 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38028921-38028956
64251 chr22 38046666 38046666 1 + C T rs929038 38046649 + 38046629 38046669 41 CTTCCGTCCACTGCCGTGCCCACCCCAGCCACCACCCCGGC CTTCCGTCCACTGCCGTGCCCACCCCAGCCACCACCCTGGC < 41bp 1 0.263742829759884 1 0.0158922970294952 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38046649 chr22:38046666 nonsynonymous SNV 0.001 3 38 hm5C_associated_SNPs_14679 0 0 3 DDX24 POSTAR2 ENCODE chr22:38046613-38046697
64251 chr22 38313787 38313787 1 + A T rs140198916 38313800 + 38313780 38313820 41 TGGAACCAGAAGATGTGGCTCAGGTAGGCAGATACCTGGAG TGGAACCTGAAGATGTGGCTCAGGTAGGCAGATACCTGGAG < 41bp 1 0.582809578700551 1 0.413079082965851 experiment 0.834380842598899 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MICALL1 ENSG00000100139 CDS Human protein_coding chr22:38313800 chr22:38313787 synonymous SNV . 0 8 hm5C_associated_SNPs_14687 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:38313758-38313794
64251 chr22 38611045 38611045 1 + C A rs76165778 38611057 + 38611037 38611077 41 TGCAGCCCCCCAAACTGGGACCGAATGACCCTGGGAAGGGG TGCAGCCCACCAAACTGGGACCGAATGACCCTGGGAAGGGG < 41bp 1 0.353376433238633 1 0.255148530006409 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAFF ENSG00000185022 UTR3 Human protein_coding chr22:38611057 chr22:38611045 . . 0 9 hm5C_associated_SNPs_14688 0 0 1 UPF1 POSTAR2 ENCODE chr22:38611022-38611064
64251 chr22 38611045 38611045 1 + C A rs76165778 38611058 + 38611038 38611078 41 GCAGCCCCCCAAACTGGGACCGAATGACCCTGGGAAGGGGA GCAGCCCACCAAACTGGGACCGAATGACCCTGGGAAGGGGA < 41bp 1 0.3463173464445 1 0.213509142398834 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAFF ENSG00000185022 UTR3 Human protein_coding chr22:38611058 chr22:38611045 . . 0 8 hm5C_associated_SNPs_14689 0 0 1 UPF1 POSTAR2 ENCODE chr22:38611022-38611064
64251 chr22 38864109 38864109 1 + G A rs532103871 38864113 + 38864093 38864133 41 GCGCGGGTGCGATCGCGGAGCTGTGAGGCGCAGGCAGGGCT GCGCGGGTGCGATCGCAGAGCTGTGAGGCGCAGGCAGGGCT < 41bp 1 0.759739470166236 1 0.428167045116425 experiment 0.480521059667529 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDELR3 ENSG00000100196 UTR5 Human protein_coding chr22:38864113 chr22:38864109 . . 0 17 hm5C_associated_SNPs_14690 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:38864100-38864120
64251 chr22 38879135 38879135 1 + A G rs555348091 38879134 + 38879114 38879154 41 TTTACTGGTTTGAATTTTTTCAAACCAGTGGCTGATACCTG TTTACTGGTTTGAATTTTTTCGAACCAGTGGCTGATACCTG < 41bp 1 0.399959196503767 1 0.742640554904938 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDELR3 ENSG00000100196 UTR3 Human protein_coding chr22:38879134 chr22:38879135 . . 0 22 hm5C_associated_SNPs_14691 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:38879105-38879141
64251 chr22 39125529 39125529 1 + G A rs16999301 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCAACGAAAAAGGGCCCCCTGACGAAACGAGACGA < 41bp 1 0.0355063153175352 1 0.127729505300522 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125529 synonymous SNV . 0 9 hm5C_associated_SNPs_14692 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125529 39125529 1 + G A rs16999301 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCAACGAAAAAGGGCCCCCTGACGAAACGAGACGAG < 41bp 1 0.0506123897305643 1 0.216477543115616 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125529 synonymous SNV . 0 8 hm5C_associated_SNPs_14693 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125529 39125529 1 + G A rs16999301 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCAACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG < 41bp 1 0.0293653550419287 1 0.201823383569717 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125529 synonymous SNV . 0 7 hm5C_associated_SNPs_14694 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125529 39125529 1 + G A rs16999301 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCAACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG < 41bp 1 0.0856763131242929 1 0.168945282697678 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125529 synonymous SNV . 0 6 hm5C_associated_SNPs_14695 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125529 39125529 1 + G A rs16999301 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCAACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG < 41bp 1 0.15430576366866 1 0.398516118526459 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125529 synonymous SNV . 0 5 hm5C_associated_SNPs_14696 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125549 39125549 1 + C A rs75211829 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCGACGAAAAAGGGCCCCCTGAAGAAACGAGACGA < 41bp 1 0.0487869222395039 1 0.158724218606949 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125549 nonsynonymous SNV 0.675 0 29 hm5C_associated_SNPs_14697 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCGACGAAAAAGGGCCCCCTGAAGAAACGAGACGAG < 41bp 1 0.0525257183098508 1 0.285941660404205 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125549 nonsynonymous SNV 0.675 0 28 hm5C_associated_SNPs_14698 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCGACGAAAAAGGGCCCCCTGAAGAAACGAGACGAGG < 41bp 1 0.0306740625693296 1 0.149678438901901 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125549 nonsynonymous SNV 0.675 0 27 hm5C_associated_SNPs_14699 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCGACGAAAAAGGGCCCCCTGAAGAAACGAGACGAGGG < 41bp 1 0.0946286143143576 1 0.193418979644775 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125549 nonsynonymous SNV 0.675 0 26 hm5C_associated_SNPs_14700 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCGACGAAAAAGGGCCCCCTGAAGAAACGAGACGAGGGG < 41bp 1 0.524015331940369 1 0.495146334171295 experiment 0.951969336119262 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125549 nonsynonymous SNV 0.675 0 25 hm5C_associated_SNPs_14701 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125568 + 39125548 39125588 41 ACGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGT AAGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGT < 41bp 1 0.119455193311462 1 0.164951592683792 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125568 chr22:39125549 nonsynonymous SNV 0.675 0 2 hm5C_associated_SNPs_14702 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125549 39125549 1 + C A rs75211829 39125569 + 39125549 39125589 41 CGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA AGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA < 41bp 1 0.0431766576375635 1 0.455005764961243 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125569 chr22:39125549 nonsynonymous SNV 0.675 0 1 hm5C_associated_SNPs_14703 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125559 39125559 1 + C T rs140918933 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGATGA < 41bp 1 0.0418436403848617 1 0.106825023889542 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125559 synonymous SNV . 0 39 hm5C_associated_SNPs_14704 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGATGAG < 41bp 1 0.048835758389172 1 0.269602119922638 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125559 synonymous SNV . 0 38 hm5C_associated_SNPs_14705 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGATGAGG < 41bp 1 0.0227002091834639 1 0.101267278194427 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125559 synonymous SNV . 0 37 hm5C_associated_SNPs_14706 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGATGAGGG < 41bp 1 0.0700223048144014 1 0.175634503364563 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125559 synonymous SNV . 0 36 hm5C_associated_SNPs_14707 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGATGAGGGG < 41bp 1 0.15560195645457 1 0.379955768585205 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125559 synonymous SNV . 0 35 hm5C_associated_SNPs_14708 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125568 + 39125548 39125588 41 ACGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGT ACGAAACGAGATGAGGGGGGCCCGTCTGGTGGGCCAGCAGT < 41bp 1 0.11739395111363 1 0.194928795099258 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125568 chr22:39125559 synonymous SNV . 0 12 hm5C_associated_SNPs_14709 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125569 + 39125549 39125589 41 CGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA CGAAACGAGATGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA < 41bp 1 0.0404288958450286 1 0.366273701190948 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125569 chr22:39125559 synonymous SNV . 0 11 hm5C_associated_SNPs_14710 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125559 39125559 1 + C T rs140918933 39125570 + 39125550 39125590 41 GAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAG GAAACGAGATGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAG < 41bp 1 0.165752529569036 1 0.34943625330925 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125570 chr22:39125559 synonymous SNV . 0 10 hm5C_associated_SNPs_14711 0 0 1 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39126748 39126748 1 + C G rs201889482 39126765 + 39126745 39126785 41 CATCATCTCTGGCCACCACTCCACCAGATGGGCAGAGCAGC CATGATCTCTGGCCACCACTCCACCAGATGGGCAGAGCAGC < 41bp 1 0.108314191478718 1 0.630942583084106 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP1 ENSG00000100226 UTR3 Human protein_coding chr22:39126765 chr22:39126748 . . 0 4 hm5C_associated_SNPs_14712 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:39126708-39126754
64251 chr22 39414699 39414699 1 + C G rs7584 39414679 + 39414659 39414699 41 TTCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATC TTCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATG < 41bp 1 0.493626198025267 1 0.0995625257492065 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414679 chr22:39414699 . . 0 41 hm5C_associated_SNPs_14714 0 0 14 LIN28B POSTAR2 GSE44616,GSM1087851 chr22:39414673-39414703
64251 chr22 39414699 39414699 1 + C G rs7584 39414680 + 39414660 39414700 41 TCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATCC TCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATGC < 41bp 1 0.510411671484164 1 0.650924682617188 experiment 0.979176657031672 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414680 chr22:39414699 . . 0 40 hm5C_associated_SNPs_14715 0 0 14 LIN28B POSTAR2 GSE44616,GSM1087851 chr22:39414673-39414703
64251 chr22 39414700 39414700 1 + C T rs12157471 39414680 + 39414660 39414700 41 TCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATCC TCCCATCTCCCCAGCATAACCAAATCTTACTAAACTCATCT < 41bp 1 0.479360716251331 1 0.569587469100952 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414680 chr22:39414700 . . 0 41 hm5C_associated_SNPs_14716 0 0 14 LIN28B POSTAR2 GSE44616,GSM1087851 chr22:39414673-39414703
64251 chr22 39826104 39826104 1 + C T rs118150487 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTCCGCTCTCGGCCCGCCCACTCGCTCCCGCCTGGCGA < 41bp 1 0.0837988798479917 1 0.174546778202057 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826104 synonymous SNV . 0 12 hm5C_associated_SNPs_14719 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr22 39827535 39827535 1 + G A rs5757669 39827552 + 39827532 39827572 41 TCTGGGGTGCTTGGTCTCTGCGAAGTCAAAGGCCTGACAGC TCTAGGGTGCTTGGTCTCTGCGAAGTCAAAGGCCTGACAGC < 41bp 1 0.607411853821535 1 0.785885751247406 experiment 0.785176292356931 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAB1 ENSG00000100324 UTR3 Human protein_coding chr22:39827552 chr22:39827535 . . 0 4 hm5C_associated_SNPs_14720 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39827497-39827553
64251 chr22 39827553 39827553 1 + G A rs7949 39827552 + 39827532 39827572 41 TCTGGGGTGCTTGGTCTCTGCGAAGTCAAAGGCCTGACAGC TCTGGGGTGCTTGGTCTCTGCAAAGTCAAAGGCCTGACAGC < 41bp 1 0.578452232962902 1 0.715445041656494 experiment 0.843095534074196 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAB1 ENSG00000100324 UTR3 Human protein_coding chr22:39827552 chr22:39827553 . . 0 22 hm5C_associated_SNPs_14721 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39827497-39827553
64251 chr22 39827556 39827556 1 + G A rs34804656 39827552 + 39827532 39827572 41 TCTGGGGTGCTTGGTCTCTGCGAAGTCAAAGGCCTGACAGC TCTGGGGTGCTTGGTCTCTGCGAAATCAAAGGCCTGACAGC < 41bp 1 0.679007104597629 1 0.833876729011536 experiment 0.641985790804742 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAB1 ENSG00000100324 UTR3 Human protein_coding chr22:39827552 chr22:39827556 . . 0 25 hm5C_associated_SNPs_14722 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:39827538-39827557
64251 chr22 39918057 39918057 1 + T A rs201312683 39918059 + 39918039 39918079 41 TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCAGATCAT TTCCCCTTTCCCCAGGGGACCTGTCCTCCACTCCAGATCAT < 41bp 1 0.207061104861766 1 0.0557126998901367 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918059 chr22:39918057 nonsynonymous SNV 0.850 0 19 hm5C_associated_SNPs_14723 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:39917980-39918060
64251 chr22 40726350 40726350 1 + C T rs187141727 40726370 + 40726350 40726390 41 CGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTG TGGCTACTGAAAGGTGTGTACAACTCCCAGAGGGGTGGCTG < 41bp 1 0.201417894786095 1 0.0522350072860718 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNRC6B ENSG00000100354 UTR3 Human protein_coding chr22:40726370 chr22:40726350 . . 0 1 hm5C_associated_SNPs_14728 0 0 8 LIN28A POSTAR2 GSE44616,GSM1087848 chr22:40726328-40726351
64251 chr22 40766641 40766641 1 + G C rs373242180 40766625 + 40766605 40766645 41 CGCTTAGGCGCCGCTGAGCGCTGACTGGGTGCGAGTGGGGA CGCTTAGGCGCCGCTGAGCGCTGACTGGGTGCGAGTCGGGA < 41bp 1 0.309037928317066 1 0.109442472457886 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SGSM3 ENSG00000100359 UTR5 Human protein_coding chr22:40766625 chr22:40766641 . . 0 37 hm5C_associated_SNPs_14729 0 0 4 DDX24 POSTAR2 ENCODE chr22:40766637-40766693
64251 chr22 40801787 40801787 1 + G C rs141654422 40801785 + 40801765 40801805 41 TCCAGACTGACCAGCGGGTCCTGCGCCACCTCATTGTCCAG TCCAGACTGACCAGCGGGTCCTCCGCCACCTCATTGTCCAG < 41bp 1 0.486022389478275 1 0.117133915424347 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40801785 chr22:40801787 synonymous SNV . 0 23 hm5C_associated_SNPs_14730 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:40801785-40801823
64251 chr22 42276825 42276825 1 + G A rs2229440 42276812 + 42276792 42276832 41 CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACATGATCCG < 41bp 1 0.0546392141585261 1 0.0645447373390198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276812 chr22:42276825 nonsynonymous SNV 0.986 2 34 hm5C_associated_SNPs_14737 0 0 5 FMR1 POSTAR2 ENCODE chr22:42276758-42276831
64251 chr22 42280866 42280866 1 + G A rs372911487 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TCCTGCAGGATCCACCTGTTCCGATGTACACATGGCGTTGT < 41bp 1 0.268701263147844 1 0.12119260430336 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280866 nonsynonymous SNV 0.891 1 14 hm5C_associated_SNPs_14738 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr22:42280861-42280880
64251 chr22 42280889 42280889 1 + G A rs112435452 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCATTGT < 41bp 1 0.293421927794687 1 0.170181632041931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280889 synonymous SNV . 0 37 hm5C_associated_SNPs_14739 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42280875-42280901
64251 chr22 42301554 42301554 1 + C T rs11538312 42301538 + 42301518 42301558 41 TCCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGC TCCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGTTGGC < 41bp 1 0.169838409047004 1 0.2718785405159 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301538 chr22:42301554 synonymous SNV . 0 37 hm5C_associated_SNPs_14740 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301554 42301554 1 + C T rs11538312 42301539 + 42301519 42301559 41 CCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCC CCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGTTGGCC < 41bp 1 0.519120448898257 1 0.662066221237183 experiment 0.961759102203486 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301539 chr22:42301554 synonymous SNV . 0 36 hm5C_associated_SNPs_14741 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301554 42301554 1 + C T rs11538312 42301542 + 42301522 42301562 41 TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGTTGGCCGAA < 41bp 1 0.671711237638481 1 0.827378451824188 experiment 0.656577524723037 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301542 chr22:42301554 synonymous SNV . 0 33 hm5C_associated_SNPs_14742 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301923 42301923 1 + A G rs147855211 42301931 + 42301911 42301951 41 CTTGATAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT CTTGATAGCAGCGGGGGGAGCTCCCAAGCTGCCAAGCCCCT < 41bp 1 0.413950709720252 1 0.322476714849472 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 UTR3 Human protein_coding chr22:42301931 chr22:42301923 . . 0 13 hm5C_associated_SNPs_14743 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:42301894-42301938
64251 chr22 42301923 42301923 1 + A G rs147855211 42301933 + 42301913 42301953 41 TGATAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTGC TGATAGCAGCGGGGGGAGCTCCCAAGCTGCCAAGCCCCTGC < 41bp 1 0.753409036843588 1 0.55657172203064 experiment 0.493181926312823 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 UTR3 Human protein_coding chr22:42301933 chr22:42301923 . . 0 11 hm5C_associated_SNPs_14744 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:42301894-42301938
64251 chr22 42301943 42301943 1 + C T rs2269664 42301931 + 42301911 42301951 41 CTTGATAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCT CTTGATAGCAGCAGGGGGAGCTCCCAAGCTGCTAAGCCCCT < 41bp 1 0.350309749821683 1 0.381366640329361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 UTR3 Human protein_coding chr22:42301931 chr22:42301943 . . 0 33 hm5C_associated_SNPs_14745 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr22:42301940-42301960
64251 chr22 42301943 42301943 1 + C T rs2269664 42301933 + 42301913 42301953 41 TGATAGCAGCAGGGGGAGCTCCCAAGCTGCCAAGCCCCTGC TGATAGCAGCAGGGGGAGCTCCCAAGCTGCTAAGCCCCTGC < 41bp 1 0.69298138007452 1 0.576689004898071 experiment 0.614037239850959 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 UTR3 Human protein_coding chr22:42301933 chr22:42301943 . . 0 31 hm5C_associated_SNPs_14746 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr22:42301940-42301960
64251 chr22 43011302 43011302 1 + C A rs148484665 43011293 + 43011273 43011313 41 AAAATAACGATTCGGGGTGACGCCCGAATCCTCACTGCTAA AAAATAACGATTCGGGGTGACGCCCGAATACTCACTGCTAA < 41bp 1 0.513238093831035 1 0.377944588661194 experiment 0.973523812337929 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011293 chr22:43011302 . . 0 30 hm5C_associated_SNPs_14748 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011302 43011302 1 + C A rs148484665 43011296 + 43011276 43011316 41 ATAACGATTCGGGGTGACGCCCGAATCCTCACTGCTAATGT ATAACGATTCGGGGTGACGCCCGAATACTCACTGCTAATGT < 41bp 1 0.561119152985994 1 0.380922317504883 experiment 0.877761694028012 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011296 chr22:43011302 . . 0 27 hm5C_associated_SNPs_14749 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011302 43011302 1 + C A rs148484665 43011305 + 43011285 43011325 41 CGGGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAAT CGGGGTGACGCCCGAATACTCACTGCTAATGTGAGACGAAT < 41bp 1 0.475200469285442 1 0.125499695539474 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011305 chr22:43011302 . . 0 18 hm5C_associated_SNPs_14750 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011302 43011302 1 + C A rs148484665 43011307 + 43011287 43011327 41 GGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAATTT GGGTGACGCCCGAATACTCACTGCTAATGTGAGACGAATTT < 41bp 1 0.429224271717657 1 0.0933567583560944 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011307 chr22:43011302 . . 0 16 hm5C_associated_SNPs_14751 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011303 43011303 1 + C G rs549604353 43011293 + 43011273 43011313 41 AAAATAACGATTCGGGGTGACGCCCGAATCCTCACTGCTAA AAAATAACGATTCGGGGTGACGCCCGAATCGTCACTGCTAA < 41bp 1 0.510779420065223 1 0.32923036813736 experiment 0.978441159869554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011293 chr22:43011303 . . 0 31 hm5C_associated_SNPs_14752 0 0 105 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011303 43011303 1 + C G rs549604353 43011296 + 43011276 43011316 41 ATAACGATTCGGGGTGACGCCCGAATCCTCACTGCTAATGT ATAACGATTCGGGGTGACGCCCGAATCGTCACTGCTAATGT < 41bp 1 0.54892764868435 1 0.49511057138443 experiment 0.902144702631299 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011296 chr22:43011303 . . 0 28 hm5C_associated_SNPs_14753 0 0 105 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011303 43011303 1 + C G rs549604353 43011305 + 43011285 43011325 41 CGGGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAAT CGGGGTGACGCCCGAATCGTCACTGCTAATGTGAGACGAAT < 41bp 1 0.343741952808188 1 0.209493964910507 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011305 chr22:43011303 . . 0 19 hm5C_associated_SNPs_14754 0 0 105 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011303 43011303 1 + C G rs549604353 43011307 + 43011287 43011327 41 GGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAATTT GGGTGACGCCCGAATCGTCACTGCTAATGTGAGACGAATTT < 41bp 1 0.379579903049497 1 0.0843262076377869 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011307 chr22:43011303 . . 0 17 hm5C_associated_SNPs_14755 0 0 105 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr22 43011321 43011321 1 + C A rs180887630 43011305 + 43011285 43011325 41 CGGGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAAT CGGGGTGACGCCCGAATCCTCACTGCTAATGTGAGAAGAAT < 41bp 1 0.360289246337767 1 0.15460005402565 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011305 chr22:43011321 . . 0 37 hm5C_associated_SNPs_14756 0 0 153 PTBP1 POSTAR2 GSE42701,GSM1048186 chr22:43011320-43011340
64251 chr22 43011321 43011321 1 + C A rs180887630 43011307 + 43011287 43011327 41 GGGTGACGCCCGAATCCTCACTGCTAATGTGAGACGAATTT GGGTGACGCCCGAATCCTCACTGCTAATGTGAGAAGAATTT < 41bp 1 0.356640721093936 1 0.0864058136940002 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011307 chr22:43011321 . . 0 35 hm5C_associated_SNPs_14757 0 0 153 PTBP1 POSTAR2 GSE42701,GSM1048186 chr22:43011320-43011340
64251 chr22 43011346 43011346 1 + C A rs59723509 43011359 + 43011339 43011379 41 AAGGTCGCCCTCAAGGTGACCCGCCTACTTTGCGGGATGCC AAGGTCGACCTCAAGGTGACCCGCCTACTTTGCGGGATGCC < 41bp 1 0.118334365326883 1 0.0747071206569672 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011359 chr22:43011346 . . 0 8 hm5C_associated_SNPs_14758 0 0 89 PTBP1 POSTAR2 GSE19323,GSM480479 chr22:43011340-43011380
64251 chr22 43011351 43011351 1 + A G rs79126439 43011359 + 43011339 43011379 41 AAGGTCGCCCTCAAGGTGACCCGCCTACTTTGCGGGATGCC AAGGTCGCCCTCGAGGTGACCCGCCTACTTTGCGGGATGCC < 41bp 1 0.140244793757854 1 0.104239046573639 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011359 chr22:43011351 . . 0 13 hm5C_associated_SNPs_14759 0 0 90 PTBP1 POSTAR2 GSE19323,GSM480479 chr22:43011340-43011380
64251 chr22 43011353 43011353 1 + G A rs542465984 43011359 + 43011339 43011379 41 AAGGTCGCCCTCAAGGTGACCCGCCTACTTTGCGGGATGCC AAGGTCGCCCTCAAAGTGACCCGCCTACTTTGCGGGATGCC < 41bp 1 0.10111999585367 1 0.0647645592689514 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011359 chr22:43011353 . . 0 15 hm5C_associated_SNPs_14760 0 0 90 PTBP1 POSTAR2 GSE19323,GSM480479 chr22:43011340-43011380
64251 chr22 43011389 43011389 1 + C T rs146703104 43011378 + 43011358 43011398 41 CCCGCCTACTTTGCGGGATGCCTGGGAGTTGCGATCTGCCC CCCGCCTACTTTGCGGGATGCCTGGGAGTTGTGATCTGCCC < 41bp 1 0.400855709339223 1 0.1701720058918 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011378 chr22:43011389 . . 0 32 hm5C_associated_SNPs_14761 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:43011368-43011399
64251 chr22 43011389 43011389 1 + C T rs146703104 43011393 + 43011373 43011413 41 GGATGCCTGGGAGTTGCGATCTGCCCGACCTTATTCACGCC GGATGCCTGGGAGTTGTGATCTGCCCGACCTTATTCACGCC < 41bp 1 0.638273799552375 1 0.427165031433105 experiment 0.72345240089525 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011393 chr22:43011389 . . 0 17 hm5C_associated_SNPs_14762 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:43011368-43011399
64251 chr22 43011389 43011389 1 + C T rs146703104 43011396 + 43011376 43011416 41 TGCCTGGGAGTTGCGATCTGCCCGACCTTATTCACGCCTAA TGCCTGGGAGTTGTGATCTGCCCGACCTTATTCACGCCTAA < 41bp 1 0.627858355457314 1 0.480824261903763 experiment 0.744283289085373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011396 chr22:43011389 . . 0 14 hm5C_associated_SNPs_14763 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:43011368-43011399
64251 chr22 43011389 43011389 1 + C T rs146703104 43011397 + 43011377 43011417 41 GCCTGGGAGTTGCGATCTGCCCGACCTTATTCACGCCTAAA GCCTGGGAGTTGTGATCTGCCCGACCTTATTCACGCCTAAA < 41bp 1 0.239969432427472 1 0.0956319868564606 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011397 chr22:43011389 . . 0 13 hm5C_associated_SNPs_14764 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:43011368-43011399
64251 chr22 43011389 43011389 1 + C T rs146703104 43011398 + 43011378 43011418 41 CCTGGGAGTTGCGATCTGCCCGACCTTATTCACGCCTAAAA CCTGGGAGTTGTGATCTGCCCGACCTTATTCACGCCTAAAA < 41bp 1 0.534686151811682 1 0.138331264257431 experiment 0.930627696376637 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011398 chr22:43011389 . . 0 12 hm5C_associated_SNPs_14765 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:43011368-43011399
64251 chr22 43558910 43558910 1 + G A rs142042960 43558927 + 43558907 43558947 41 CCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTGCG CCTAGCCTGGCTGGCCTTCACGACCACACTCAACTACTGCG < 41bp 1 0.586830024272757 1 0.118652880191803 experiment 0.826339951454486 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558927 chr22:43558910 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_14766 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:43558876-43558914
64251 chr22 43558926 43558926 1 + A G rs6971 43558927 + 43558907 43558947 41 CCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTGCG CCTGGCCTGGCTGGCCTTCGCGACCACACTCAACTACTGCG < 41bp 1 0.558063652089833 1 0.376720160245895 experiment 0.883872695820334 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558927 chr22:43558926 nonsynonymous SNV 0.040 0 20 hm5C_associated_SNPs_14767 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr22 43559152 43559152 1 + C G rs373324032 43559164 + 43559144 43559184 41 CCTGAGCCCCCACCCGGGAGCAGTGTCCTGTGCTTTCTGCA CCTGAGCCGCCACCCGGGAGCAGTGTCCTGTGCTTTCTGCA < 41bp 1 0.518226815100285 1 0.109333753585815 experiment 0.963546369799429 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TSPO ENSG00000100300 UTR3 Human protein_coding chr22:43559164 chr22:43559152 . . 0 9 hm5C_associated_SNPs_14768 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:43558994-43559226
64251 chr22 44332974 44332974 1 + A C rs78730442 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC CATCCTCAGACGGGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.625890002541243 1 0.168259799480438 experiment 0.748219994917514 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332974 nonsynonymous SNV 0.000 0 11 hm5C_associated_SNPs_14769 0 0 3 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr22 44342515 44342515 1 + G A rs554741738 44342508 + 44342488 44342528 41 GGAAATGACACCAGGAAGCCCAGTGCAGAGGGTCCCTTACT GGAAATGACACCAGGAAGCCCAGTGCAAAGGGTCCCTTACT < 41bp 1 0.546288819223293 1 0.858416199684143 experiment 0.907422361553414 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PNPLA3 ENSG00000100344 UTR3 Human protein_coding chr22:44342508 chr22:44342515 . . 0 28 hm5C_associated_SNPs_14770 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:44342503-44342530
64251 chr22 44368122 44368122 1 + A G rs3761472 44368123 + 44368103 44368143 41 TTTTTTTATTTAGGTGATGACGCACTTCCAAATGGGTTAGA TTTTTTTATTTAGGTGATGGCGCACTTCCAAATGGGTTAGA < 41bp 1 0.153855776742277 1 0.280539929866791 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44368123 chr22:44368122 nonsynonymous SNV 0.947 1 20 hm5C_associated_SNPs_14771 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr22:44368118-44368163
64251 chr22 44379822 44379822 1 + T A rs10452 44379837 + 44379817 44379857 41 TACCTTGGGGGACCCACAAGCATCCGCGGATTCAGCATGCA TACCTAGGGGGACCCACAAGCATCCGCGGATTCAGCATGCA < 41bp 1 0.257224795239533 1 0.382186859846115 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379837 chr22:44379822 synonymous SNV . 0 6 hm5C_associated_SNPs_14772 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr22 44379838 44379838 1 + A G rs8418 44379837 + 44379817 44379857 41 TACCTTGGGGGACCCACAAGCATCCGCGGATTCAGCATGCA TACCTTGGGGGACCCACAAGCGTCCGCGGATTCAGCATGCA < 41bp 1 0.290353330030933 1 0.526887118816376 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379837 chr22:44379838 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_14773 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr22 44420203 44420203 1 + G A rs556471411 44420198 + 44420178 44420218 41 CTCCACACGCGCTGCGCCCGCCGCCGGCCCCACGCGCGGCC CTCCACACGCGCTGCGCCCGCCGCCAGCCCCACGCGCGGCC < 41bp 1 0.30128305321914 1 0.479907155036926 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PARVB ENSG00000188677 UTR5 Human protein_coding chr22:44420198 chr22:44420203 . . 0 26 hm5C_associated_SNPs_14774 0 0 3 DDX3X POSTAR2 ENCODE chr22:44420182-44420273
64251 chr22 44420207 44420207 1 + C G rs576304296 44420198 + 44420178 44420218 41 CTCCACACGCGCTGCGCCCGCCGCCGGCCCCACGCGCGGCC CTCCACACGCGCTGCGCCCGCCGCCGGCCGCACGCGCGGCC < 41bp 1 0.380833158216376 1 0.660799860954285 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PARVB ENSG00000188677 UTR5 Human protein_coding chr22:44420198 chr22:44420207 . . 0 30 hm5C_associated_SNPs_14775 0 0 3 DDX3X POSTAR2 ENCODE chr22:44420182-44420273
64251 chr22 45126857 45126857 1 + C T rs554434356 45126863 + 45126843 45126883 41 CTCAGCTGGGTCCCCAGTGCCCAGCATCAGCGCCAGCACAC CTCAGCTGGGTCCCTAGTGCCCAGCATCAGCGCCAGCACAC < 41bp 1 0.0868906441001168 1 0.0993631184101105 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRR5;PRR5-ARHGAP8 ENSG00000186654 CDS Human protein_coding chr22:45126863 chr22:45126857 unknown . 0 15 hm5C_associated_SNPs_14777 0 0 2 EFTUD2 POSTAR2 ENCODE chr22:45126815-45126857
64251 chr22 45127435 45127435 1 + G T rs2269572 45127451 + 45127431 45127471 41 GTGGGCCCAGGGCCATAGAACAGCTGAGCTGTGGAGCTGGA GTGGTCCCAGGGCCATAGAACAGCTGAGCTGTGGAGCTGGA < 41bp 1 0.165292891162705 1 0.391485631465912 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000241484;ENSG00000248405 intronic Human other chr22:45127451 chr22:45127435 . . 0 5 hm5C_associated_SNPs_14778 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:45127408-45127438
64251 chr22 45246250 45246250 1 + C G rs6006891 45246265 + 45246245 45246285 41 AGGTACCTATCTGGTGGAGACAGAAGGAGGCACTACATTCA AGGTAGCTATCTGGTGGAGACAGAAGGAGGCACTACATTCA < 41bp 1 0.762517365761455 1 0.685341119766235 experiment 0.47496526847709 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 intronic Human other chr22:45246265 chr22:45246250 . . 0 6 hm5C_associated_SNPs_14779 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:45246227-45246278
64251 chr22 45246275 45246275 1 + C T rs79212456 45246265 + 45246245 45246285 41 AGGTACCTATCTGGTGGAGACAGAAGGAGGCACTACATTCA AGGTACCTATCTGGTGGAGACAGAAGGAGGTACTACATTCA < 41bp 1 0.700185570067624 1 0.521411657333374 experiment 0.599628859864752 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 intronic Human other chr22:45246265 chr22:45246275 . . 0 31 hm5C_associated_SNPs_14780 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:45246227-45246278
64251 chr22 45579396 45579396 1 + A G rs373726931 45579387 + 45579367 45579407 41 GACACAGCTTTTGGTGCGGGCAGACACCAATTTAGGTGGGT GACACAGCTTTTGGTGCGGGCAGACACCAGTTTAGGTGGGT < 41bp 1 0.111320855245117 1 0.405493766069412 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUP50 ENSG00000093000 CDS Human protein_coding chr22:45579387 chr22:45579396 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_14783 0 0 1 PRPF8 POSTAR2 ENCODE chr22:45579378-45579438
64251 chr22 45818230 45818230 1 + T A rs145976708 45818239 + 45818219 45818259 41 CCTCCAGAAGCTGGAAAGCACCACCAGAAAGGCAGTTTGTG CCTCCAGAAGCAGGAAAGCACCACCAGAAAGGCAGTTTGTG < 41bp 1 0.103202041790074 1 0.0489808917045593 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIBC2 ENSG00000128408 CDS Human protein_coding chr22:45818239 chr22:45818230 nonsynonymous SNV 0.274 0 12 hm5C_associated_SNPs_14784 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:45818202-45818240
64251 chr22 46067896 46067896 1 + C T rs563463705 46067913 + 46067893 46067933 41 CTCCTCGCCTTCCTCCTCCTCGTCAGGCTCGACCCAGCTGT CTCTTCGCCTTCCTCCTCCTCGTCAGGCTCGACCCAGCTGT < 41bp 1 0.680524277064704 1 0.371097803115845 experiment 0.638951445870592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATXN10 ENSG00000130638 UTR5 Human protein_coding chr22:46067913 chr22:46067896 . . 0 4 hm5C_associated_SNPs_14786 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:46067720-46067900
64251 chr22 46067937 46067937 1 + C T rs565770838 46067951 + 46067931 46067971 41 TGTGAGCGGCAAGATGGCGGCGCCCAGGCCGCCGCCTGCCA TGTGAGTGGCAAGATGGCGGCGCCCAGGCCGCCGCCTGCCA < 41bp 1 0.592981435931633 1 0.323338329792023 experiment 0.814037128136733 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ATXN10 ENSG00000130638 UTR5 Human protein_coding chr22:46067951 chr22:46067937 . . 0 7 hm5C_associated_SNPs_14787 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr22:46067920-46067940
64251 chr22 46681141 46681141 1 + G A rs35883013 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCAAATATGAGGCCGCGCTGAC < 41bp 1 0.0899590740397858 1 0.15700426697731 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681141 nonsynonymous SNV 0.044 1 22 hm5C_associated_SNPs_14789 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr22 46712110 46712110 1 + G A rs573781773 46712102 + 46712082 46712122 41 TTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCA TTTCTGAGCTGGCAGCGGAGCAGCTCACAGCACCCCCCTCA < 41bp 1 0.599131993180588 1 0.490701794624329 experiment 0.801736013638825 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712102 chr22:46712110 synonymous SNV . 0 29 hm5C_associated_SNPs_14790 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46712096-46712121
64251 chr22 46712110 46712110 1 + G A rs573781773 46712107 + 46712087 46712127 41 GAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCAGCATC GAGCTGGCAGCGGAGCAGCTCACAGCACCCCCCTCAGCATC < 41bp 1 0.725985760372789 1 0.242296457290649 experiment 0.548028479254422 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712107 chr22:46712110 synonymous SNV . 0 24 hm5C_associated_SNPs_14791 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46712096-46712121
64251 chr22 46726376 46726376 1 + T A rs569790660 46726360 + 46726340 46726380 41 ACTGCACTCCAGCCTGGGCACCAATGTGAGAACCTGTCTTG ACTGCACTCCAGCCTGGGCACCAATGTGAGAACCTGACTTG < 41bp 1 0.256971991463974 1 0.265496909618378 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTSE1 ENSG00000075218 UTR3 Human protein_coding chr22:46726360 chr22:46726376 . . 0 37 hm5C_associated_SNPs_14792 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr22:46726335-46726386
64251 chr22 46733831 46733831 1 + G A rs55952751 46733839 + 46733819 46733859 41 GAGTATTGGAATGATGTGTTCAGGTGAGTGCGGGTCACAGC GAGTATTGGAATAATGTGTTCAGGTGAGTGCGGGTCACAGC < 41bp 1 0.678637496492344 1 0.75324273109436 experiment 0.642725007015312 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRMU ENSG00000100416 CDS Human protein_coding chr22:46733839 chr22:46733831 nonsynonymous SNV 0.846 0 13 hm5C_associated_SNPs_14793 1 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:46733697-46733837
64251 chr22 50356850 50356850 1 + C G rs1801645 50356835 + 50356815 50356855 41 TGGCCAGACCTGGGACGCCCCCAGACCCTGACTTTCTCCTG TGGCCAGACCTGGGACGCCCCCAGACCCTGACTTTGTCCTG < 41bp 1 0.63487865407603 1 0.130755990743637 experiment 0.730242691847939 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50356835 chr22:50356850 . . 0 36 hm5C_associated_SNPs_14794 0 0 22 UPF1 POSTAR2 GSE69586,GSM1704214 chr22:50356839-50356860
64251 chr22 50357408 50357408 1 + G T rs369513773 50357419 + 50357399 50357439 41 GTGCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAA GTGCCTGGCTTCTGTCCCGGCCCCGCCTGTCAGAAGATGAA < 41bp 1 0.230718771435556 1 0.102987468242645 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357419 chr22:50357408 . . 0 10 hm5C_associated_SNPs_14795 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50357378-50357412
64251 chr22 50357408 50357408 1 + G T rs369513773 50357421 + 50357401 50357441 41 GCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACA GCCTGGCTTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACA < 41bp 1 0.102715079618777 1 0.0536040663719177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357421 chr22:50357408 . . 0 8 hm5C_associated_SNPs_14796 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50357378-50357412
64251 chr22 50357408 50357408 1 + G T rs369513773 50357424 + 50357404 50357444 41 TGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACATGT TGGCTTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACATGT < 41bp 1 0.133187063844872 1 0.0274135768413544 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357424 chr22:50357408 . . 0 5 hm5C_associated_SNPs_14797 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50357378-50357412
64251 chr22 50357416 50357416 1 + C A rs13811 50357419 + 50357399 50357439 41 GTGCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAA GTGCCTGGCGTCTGTCCAGGCCCCGCCTGTCAGAAGATGAA < 41bp 1 0.309595384904958 1 0.142034649848938 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357419 chr22:50357416 . . 0 18 hm5C_associated_SNPs_14798 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr22:50357399-50357420
64251 chr22 50357416 50357416 1 + C A rs13811 50357421 + 50357401 50357441 41 GCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACA GCCTGGCGTCTGTCCAGGCCCCGCCTGTCAGAAGATGAACA < 41bp 1 0.127152630100507 1 0.0399906933307648 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357421 chr22:50357416 . . 0 16 hm5C_associated_SNPs_14799 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr22:50357399-50357420
64251 chr22 50357416 50357416 1 + C A rs13811 50357424 + 50357404 50357444 41 TGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACATGT TGGCGTCTGTCCAGGCCCCGCCTGTCAGAAGATGAACATGT < 41bp 1 0.155913256170452 1 0.0473378002643585 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357424 chr22:50357416 . . 0 13 hm5C_associated_SNPs_14800 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr22:50357399-50357420
64251 chr22 50357441 50357441 1 + A C rs563722911 50357421 + 50357401 50357441 41 GCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACA GCCTGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACC < 41bp 1 0.110733166462839 1 0.0705606639385223 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357421 chr22:50357441 . . 0 41 hm5C_associated_SNPs_14801 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50357429-50357456
64251 chr22 50357441 50357441 1 + A C rs563722911 50357424 + 50357404 50357444 41 TGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACATGT TGGCGTCTGTCCCGGCCCCGCCTGTCAGAAGATGAACCTGT < 41bp 1 0.176300420455478 1 0.0550456345081329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357424 chr22:50357441 . . 0 38 hm5C_associated_SNPs_14802 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50357429-50357456
64251 chr22 50357657 50357657 1 + A G rs150927168 50357675 + 50357655 50357695 41 AAAGTGAGATGTCTGGAGATCATATTTTTTTATACAGGTAT AAGGTGAGATGTCTGGAGATCATATTTTTTTATACAGGTAT < 41bp 1 0.0805314441034175 1 0.289348572492599 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357675 chr22:50357657 . . 0 3 hm5C_associated_SNPs_14803 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr22:50357588-50357675
64251 chr22 50357667 50357667 1 + C G rs189822817 50357675 + 50357655 50357695 41 AAAGTGAGATGTCTGGAGATCATATTTTTTTATACAGGTAT AAAGTGAGATGTGTGGAGATCATATTTTTTTATACAGGTAT < 41bp 1 0.0910829093990562 1 0.269570887088776 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PIM3 ENSG00000198355 UTR3 Human protein_coding chr22:50357675 chr22:50357667 . . 0 13 hm5C_associated_SNPs_14804 0 0 20 TARDBP POSTAR2 DRA001158,DRS012386 chr22:50357588-50357675
64251 chr22 50655822 50655822 1 + C T rs2272853 50655841 + 50655821 50655861 41 CCTGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGGCCA CTTGGAGTCTCCCGAGGCCCCCATGTGCTGCTGAGTGGCCA < 41bp 1 0.268329374963374 1 0.172829031944275 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SELENOO ENSG00000073169 UTR3 Human protein_coding chr22:50655841 chr22:50655822 . . 0 2 hm5C_associated_SNPs_14806 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50655821-50655859
64251 chr22 50861956 50861956 1 + C T rs373613910 50861963 + 50861943 50861983 41 CCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCAC CCCGTCTGCATGGTGCCCGCCTCATGGCAGCACTGCTGCAC < 41bp 1 0.460314488983343 1 0.270027339458466 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50861963 chr22:50861956 synonymous SNV . 0 14 hm5C_associated_SNPs_14807 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50861933-50861956
64251 chr22 50877166 50877166 1 + G A rs4824131 50877165 + 50877145 50877185 41 GGCCCCCGGGAAGAAGGAAGCGCCCCCTGTGGAGGGTGACT GGCCCCCGGGAAGAAGGAAGCACCCCCTGTGGAGGGTGACT < 41bp 1 0.263534839008836 1 0.184262275695801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50877165 chr22:50877166 synonymous SNV . 0 22 hm5C_associated_SNPs_14808 0 0 3 DDX24 POSTAR2 ENCODE chr22:50877165-50877177
64251 chr22 50882469 50882469 1 + G A rs200092795 50882453 + 50882433 50882473 41 ACCCACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCGGTCC ACCCACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCAGTCC < 41bp 1 0.772436854783224 1 0.903335690498352 experiment 0.455126290433552 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882453 chr22:50882469 synonymous SNV . 0 37 hm5C_associated_SNPs_14809 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:50882468-50882469
64251 chr22 50882469 50882469 1 + G A rs200092795 50882468 + 50882448 50882488 41 CTCTTCTGCACTGGCCGTGGCGGTCCCCCTAGGGCCCATCA CTCTTCTGCACTGGCCGTGGCAGTCCCCCTAGGGCCCATCA < 41bp 1 0.179694179682947 1 0.173076868057251 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882468 chr22:50882469 synonymous SNV . 0 22 hm5C_associated_SNPs_14810 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:50882468-50882469
64251 chr22 50882483 50882483 1 + C A rs573472469 50882468 + 50882448 50882488 41 CTCTTCTGCACTGGCCGTGGCGGTCCCCCTAGGGCCCATCA CTCTTCTGCACTGGCCGTGGCGGTCCCCCTAGGGCACATCA < 41bp 1 0.187588156156831 1 0.215956449508667 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882468 chr22:50882483 nonsynonymous SNV 0.003 3 36 hm5C_associated_SNPs_14811 0 0 2 FMR1 POSTAR2 ENCODE chr22:50882460-50882525
64251 chr22 50958056 50958056 1 + C T rs8141871 50958060 + 50958040 50958080 41 CCAAGGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGT CCAAGGCGCCTCTCTGTAGTCGGGCTGGTAGGAGGGAGTGT < 41bp 1 0.582225911490991 1 0.882591485977173 experiment 0.835548177018018 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCAPH2 ENSG00000025770 UTR3 Human protein_coding chr22:50958060 chr22:50958056 . . 0 17 hm5C_associated_SNPs_14812 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50957913-50958089
64251 chr22 50958056 50958056 1 + C T rs8141871 50958064 + 50958044 50958084 41 GGCGCCTCTCTGCAGTCGGGCTGGTAGGAGGGAGTGTCTGG GGCGCCTCTCTGTAGTCGGGCTGGTAGGAGGGAGTGTCTGG < 41bp 1 0.348401217358131 1 0.0483845770359039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCAPH2 ENSG00000025770 UTR3 Human protein_coding chr22:50958064 chr22:50958056 . . 0 13 hm5C_associated_SNPs_14813 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50957913-50958089
64251 chr22 50959456 50959456 1 + C G rs147011565 50959441 + 50959421 50959461 41 CTGCGGGAGCGGGAGGGGGCCCCAGAGCCTGCATCCTGCGT CTGCGGGAGCGGGAGGGGGCCCCAGAGCCTGCATCGTGCGT < 41bp 1 0.337354474587401 1 0.422895014286041 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50959441 chr22:50959456 synonymous SNV . 0 36 hm5C_associated_SNPs_14814 0 0 1 PRPF8 POSTAR2 ENCODE chr22:50959453-50959505
64251 chr22 50959459 50959459 1 + C T rs559989268 50959441 + 50959421 50959461 41 CTGCGGGAGCGGGAGGGGGCCCCAGAGCCTGCATCCTGCGT CTGCGGGAGCGGGAGGGGGCCCCAGAGCCTGCATCCTGTGT < 41bp 1 0.336249942409005 1 0.457937389612198 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50959441 chr22:50959459 synonymous SNV . 0 39 hm5C_associated_SNPs_14815 0 0 2 PRPF8 POSTAR2 ENCODE chr22:50959458-50959524
64251 chr22 50960197 50960197 1 + T C rs150206007 50960214 + 50960194 50960234 41 GTGTGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGC GTGCGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGC < 41bp 1 0.779109723248195 1 0.27430123090744 experiment 0.441780553503609 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50960214 chr22:50960197 nonsynonymous SNV 0.991 1 4 hm5C_associated_SNPs_14816 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:50960180-50960200
64251 chr22 51143520 51143520 1 + C T rs188450024 51143513 + 51143493 51143533 41 GAAGCCAGAAGAGGACGGGGCTCGGCGCAGAGGTGAGGGGT GAAGCCAGAAGAGGACGGGGCTCGGCGTAGAGGTGAGGGGT < 41bp 1 0.290895193599566 1 0.636919260025024 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51143513 chr22:51143520 synonymous SNV . 0 28 hm5C_associated_SNPs_14817 0 0 6 BUD13 POSTAR2 ENCODE chr22:51143448-51143535
64251 chrX 217386 217386 1 + T C rs141617516 217405 + 217385 217425 41 ATTTTTTGAGGAGTCTCACTCTGTCACCCAGGCTGGAGTGC ACTTTTTGAGGAGTCTCACTCTGTCACCCAGGCTGGAGTGC < 41bp 1 0.100949865314253 1 0.478564023971558 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:217405 chrX:217386 . . 0 2 hm5C_associated_SNPs_14821 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:217380-217392
64251 chrX 217662 217662 1 + G A rs192434627 217645 + 217625 217665 41 CTCCCAAAGTGCTGGGATGACAGGCATGAGCCACTGTGCCC CTCCCAAAGTGCTGGGATGACAGGCATGAGCCACTGTACCC < 41bp 1 0.79831640117081 1 0.523277521133423 experiment 0.403367197658381 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:217645 chrX:217662 . . 0 38 hm5C_associated_SNPs_14829 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chrX:217660-217680
64251 chrX 217662 217662 1 + G A rs192434627 217649 + 217629 217669 41 CAAAGTGCTGGGATGACAGGCATGAGCCACTGTGCCCAGCC CAAAGTGCTGGGATGACAGGCATGAGCCACTGTACCCAGCC < 41bp 1 0.559238646268591 1 0.43538498878479 experiment 0.881522707462818 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:217649 chrX:217662 . . 0 34 hm5C_associated_SNPs_14830 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chrX:217660-217680
64251 chrX 217669 217669 1 + C T rs183387425 217649 + 217629 217669 41 CAAAGTGCTGGGATGACAGGCATGAGCCACTGTGCCCAGCC CAAAGTGCTGGGATGACAGGCATGAGCCACTGTGCCCAGCT < 41bp 1 0.547735027772459 1 0.559852242469788 experiment 0.904529944455083 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:217649 chrX:217669 . . 0 41 hm5C_associated_SNPs_14831 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chrX:217660-217680
64251 chrX 219429 219429 1 + C T rs184120939 219448 + 219428 219468 41 ACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCT ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCT < 41bp 1 0.438570256282549 1 0.214371263980865 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:219448 chrX:219429 . . 0 2 hm5C_associated_SNPs_14834 0 0 1 HNRNPC POSTAR2 ENCODE chrX:219421-219464
64251 chrX 219429 219429 1 + C T rs184120939 219449 + 219429 219469 41 CGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTG TGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGATCTCCTG < 41bp 1 0.468630562681741 1 0.100869685411453 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:219449 chrX:219429 . . 0 1 hm5C_associated_SNPs_14835 0 0 1 HNRNPC POSTAR2 ENCODE chrX:219421-219464
64251 chrX 2609285 2609285 1 + C T rs747341507 2609296 + 2609276 2609316 41 CTCCCCTCACCCGCCCCCTTCGAGTCCCCGGGCTTCGCCCC CTCCCCTCATCCGCCCCCTTCGAGTCCCCGGGCTTCGCCCC < 41bp 1 0.695518389674534 1 0.401729494333267 experiment 0.608963220650932 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609296 chrX:2609285 . . 0 10 hm5C_associated_SNPs_14858 0 0 2 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2609303 2609303 1 + C T rs3199720 2609296 + 2609276 2609316 41 CTCCCCTCACCCGCCCCCTTCGAGTCCCCGGGCTTCGCCCC CTCCCCTCACCCGCCCCCTTCGAGTCCTCGGGCTTCGCCCC < 41bp 1 0.660182873414028 1 0.427235424518585 experiment 0.679634253171945 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609296 chrX:2609303 . . 0 28 hm5C_associated_SNPs_14859 0 0 3 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2609303 2609303 1 + C T rs3199720 2609311 + 2609291 2609331 41 CCCTTCGAGTCCCCGGGCTTCGCCCCACCCGGCCCGTGGGG CCCTTCGAGTCCTCGGGCTTCGCCCCACCCGGCCCGTGGGG < 41bp 1 0.438369167998483 1 0.403300404548645 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609311 chrX:2609303 . . 0 13 hm5C_associated_SNPs_14860 0 0 3 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2609312 2609312 1 + G A rs3199721 2609296 + 2609276 2609316 41 CTCCCCTCACCCGCCCCCTTCGAGTCCCCGGGCTTCGCCCC CTCCCCTCACCCGCCCCCTTCGAGTCCCCGGGCTTCACCCC < 41bp 1 0.65705938868246 1 0.286334067583084 experiment 0.68588122263508 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609296 chrX:2609312 . . 0 37 hm5C_associated_SNPs_14861 0 0 5 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2609312 2609312 1 + G A rs3199721 2609311 + 2609291 2609331 41 CCCTTCGAGTCCCCGGGCTTCGCCCCACCCGGCCCGTGGGG CCCTTCGAGTCCCCGGGCTTCACCCCACCCGGCCCGTGGGG < 41bp 1 0.402921031619878 1 0.227206885814667 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609311 chrX:2609312 . . 0 22 hm5C_associated_SNPs_14862 0 0 5 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2609324 2609324 1 + C T rs188649260 2609311 + 2609291 2609331 41 CCCTTCGAGTCCCCGGGCTTCGCCCCACCCGGCCCGTGGGG CCCTTCGAGTCCCCGGGCTTCGCCCCACCCGGCTCGTGGGG < 41bp 1 0.450251099461789 1 0.496922731399536 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609311 chrX:2609324 . . 0 34 hm5C_associated_SNPs_14863 0 0 6 DDX3X POSTAR2 ENCODE chrX:2609263-2609386
64251 chrX 2632482 2632482 1 + C A rs1136447 2632489 + 2632469 2632509 41 GTTTCGATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT GTTTCGATTTATCAGATGCCCTTCCTGGTGAGTATCAACAT < 41bp 1 0.0848260868672078 1 0.0686672329902649 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2632489 chrX:2632482 synonymous SNV . 0 14 hm5C_associated_SNPs_14864 0 0 3 DDX3X POSTAR2 ENCODE chrX:2632462-2632496
64251 chrX 9469880 9469880 1 + A G rs373782775 9469881 + 9469861 9469901 41 CTCGCAGAGCACCAGGCCCACCGTGAAAGGTACAGCAAATT CTCGCAGAGCACCAGGCCCGCCGTGAAAGGTACAGCAAATT < 41bp 1 0.145300555533996 1 0.177938431501389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBL1X ENSG00000101849 UTR5 Human protein_coding chrX:9469881 chrX:9469880 . . 0 20 hm5C_associated_SNPs_14865 0 0 2 BUD13 POSTAR2 ENCODE chrX:9469819-9469890
64251 chrX 11781102 11781102 1 + C A rs143225215 11781084 + 11781064 11781104 41 CACGTTATGCCACATGCCAACATGAACGTGCATTATATCCC CACGTTATGCCACATGCCAACATGAACGTGCATTATATACC < 41bp 1 0.488626142670981 1 0.0673393905162811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSL3 ENSG00000005302 CDS Human protein_coding chrX:11781084 chrX:11781102 synonymous SNV . 0 39 hm5C_associated_SNPs_14867 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:11781087-11781109
64251 chrX 11784773 11784773 1 + C A rs56355328 11784781 + 11784761 11784801 41 CACCTGGTGCCTCGCGGGCTCAGTGAGTTAGGAAGTCAGCA CACCTGGTGCCTAGCGGGCTCAGTGAGTTAGGAAGTCAGCA < 41bp 1 0.696051418681792 1 0.308112174272537 experiment 0.607897162636416 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSL3 ENSG00000005302 UTR3 Human protein_coding chrX:11784781 chrX:11784773 . . 0 13 hm5C_associated_SNPs_14868 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:11784761-11784780
64251 chrX 11784799 11784799 1 + G A rs41309683 11784781 + 11784761 11784801 41 CACCTGGTGCCTCGCGGGCTCAGTGAGTTAGGAAGTCAGCA CACCTGGTGCCTCGCGGGCTCAGTGAGTTAGGAAGTCAACA < 41bp 1 0.691956732652604 1 0.48053103685379 experiment 0.616086534694791 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSL3 ENSG00000005302 UTR3 Human protein_coding chrX:11784781 chrX:11784799 . . 0 39 hm5C_associated_SNPs_14870 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:11784789-11784814
64251 chrX 12841161 12841161 1 + C G rs182773327 12841176 + 12841156 12841196 41 TTTGTCATTTTGACTTTTAACAGGTACAGGTGATCTCTTCC TTTGTGATTTTGACTTTTAACAGGTACAGGTGATCTCTTCC < 41bp 1 0.757611689802505 1 0.713713526725769 experiment 0.48477662039499 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS2 ENSG00000101911 UTR3 Human protein_coding chrX:12841176 chrX:12841161 . . 0 6 hm5C_associated_SNPs_14871 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:12841117-12841174
64251 chrX 12841166 12841166 1 + T C rs189102420 12841176 + 12841156 12841196 41 TTTGTCATTTTGACTTTTAACAGGTACAGGTGATCTCTTCC TTTGTCATTTCGACTTTTAACAGGTACAGGTGATCTCTTCC < 41bp 1 0.75369564133644 1 0.587566494941711 experiment 0.492608717327119 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS2 ENSG00000101911 UTR3 Human protein_coding chrX:12841176 chrX:12841166 . . 0 11 hm5C_associated_SNPs_14872 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:12841117-12841174
64251 chrX 16753432 16753432 1 + C T rs140055188 16753431 + 16753411 16753451 41 AGCACAAACAATAAAGAAATCCGTAGAAGAAGGAAAAATAG AGCACAAACAATAAAGAAATCTGTAGAAGAAGGAAAAATAG < 41bp 1 0.65657455853446 1 0.331674158573151 experiment 0.686850882931081 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16753431 chrX:16753432 synonymous SNV . 0 22 hm5C_associated_SNPs_14878 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16753368-16753442
64251 chrX 19373839 19373839 1 + A C rs1126565 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCCGAGAGGCCACAAGGTTTGCTGCTGCCT < 41bp 1 0.351544157757273 1 0.117314755916595 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373839 synonymous SNV . 0 22 hm5C_associated_SNPs_14889 0 0 6 DDX24 POSTAR2 ENCODE chrX:19373815-19373881
64251 chrX 19373842 19373842 1 + A G rs35752213 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCCGAGAGGCAACGAGGTTTGCTGCTGCCT < 41bp 1 0.477234496870227 1 0.394874572753906 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373842 synonymous SNV . 0 25 hm5C_associated_SNPs_14890 1 0 7 DDX24 POSTAR2 ENCODE chrX:19373815-19373881
64251 chrX 21869647 21869647 1 + C T rs371946947 21869650 + 21869630 21869670 41 CCTGGTATAAATTTACCCGTCAATCAACTGACCTATTTCTT CCTGGTATAAATTTACCTGTCAATCAACTGACCTATTTCTT < 41bp 1 0.117363692340359 1 0.15087965130806 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21869650 chrX:21869647 synonymous SNV . 0 18 hm5C_associated_SNPs_14891 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:21869634-21869659
64251 chrX 21901903 21901903 1 + G A rs5951476 21901902 + 21901882 21901922 41 TGGCTATACGTGAGTACAAACGTGGATTTTCCAGGGCTTGG TGGCTATACGTGAGTACAAACATGGATTTTCCAGGGCTTGG < 41bp 1 0.740100476394672 1 0.260192781686783 experiment 0.519799047210656 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MBTPS2 ENSG00000012174 UTR3 Human protein_coding chrX:21901902 chrX:21901903 . . 0 22 hm5C_associated_SNPs_14893 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:21901856-21901918
64251 chrX 21958851 21958851 1 + A C rs34507903 21958850 + 21958830 21958870 41 CCTGGCCTCCCCGGGCGCAGCACACTCCCAGCCGGCCGCAG CCTGGCCTCCCCGGGCGCAGCCCACTCCCAGCCGGCCGCAG < 41bp 1 0.496018574774147 1 0.154942333698273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMS ENSG00000102172 UTR5 Human protein_coding chrX:21958850 chrX:21958851 . . 0 22 hm5C_associated_SNPs_14894 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:21958820-21958900
64251 chrX 21958851 21958851 1 + A C rs34507903 21958852 + 21958832 21958872 41 TGGCCTCCCCGGGCGCAGCACACTCCCAGCCGGCCGCAGCC TGGCCTCCCCGGGCGCAGCCCACTCCCAGCCGGCCGCAGCC < 41bp 1 0.495817472097634 1 0.168920367956161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMS ENSG00000102172 UTR5 Human protein_coding chrX:21958852 chrX:21958851 . . 0 20 hm5C_associated_SNPs_14895 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:21958820-21958900
64251 chrX 24095289 24095289 1 + G A rs111579157 24095295 + 24095275 24095315 41 CCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTA CCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTA < 41bp 1 0.620711379104047 1 0.0969231724739075 experiment 0.758577241791905 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095295 chrX:24095289 . . 0 15 hm5C_associated_SNPs_14896 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095296 + 24095276 24095316 41 CCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAG CCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAG < 41bp 1 0.759404635057229 1 0.10560330748558 experiment 0.481190729885542 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095296 chrX:24095289 . . 0 14 hm5C_associated_SNPs_14897 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095299 + 24095279 24095319 41 GGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTG GGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTG < 41bp 1 0.453022006679339 1 0.0466458797454834 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095299 chrX:24095289 . . 0 11 hm5C_associated_SNPs_14898 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095300 + 24095280 24095320 41 GGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGA GGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGA < 41bp 1 0.798352235080048 1 0.2312231361866 experiment 0.403295529839904 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095300 chrX:24095289 . . 0 10 hm5C_associated_SNPs_14899 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095302 + 24095282 24095322 41 TTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGA TTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGA < 41bp 1 0.680577898166225 1 0.707914888858795 experiment 0.638844203667549 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095302 chrX:24095289 . . 0 8 hm5C_associated_SNPs_14900 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095305 + 24095285 24095325 41 AAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTA AAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTA < 41bp 1 0.12424931856034 1 0.108385771512985 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095305 chrX:24095289 . . 0 5 hm5C_associated_SNPs_14901 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095306 + 24095286 24095326 41 AGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTAC AGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTAC < 41bp 1 0.484960094032919 1 0.333979547023773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095306 chrX:24095289 . . 0 4 hm5C_associated_SNPs_14902 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24095289 24095289 1 + G A rs111579157 24095309 + 24095289 24095329 41 GATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGG AATTCTCCTGCCTCAGCCTCCCGAGTAGCTGAGATTACAGG < 41bp 1 0.480846634714635 1 0.598614096641541 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control EIF2S3 ENSG00000130741 UTR3 Human protein_coding chrX:24095309 chrX:24095289 . . 0 1 hm5C_associated_SNPs_14903 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:24095193-24095300
64251 chrX 24231425 24231425 1 + G T rs183464240 24231409 + 24231389 24231429 41 TTAAGACGAATCTGGGAGAACAGAAAACAGTTTTTGGGGTC TTAAGACGAATCTGGGAGAACAGAAAACAGTTTTTGTGGTC < 41bp 1 0.779479617952558 1 0.614659905433655 experiment 0.441040764094883 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFX ENSG00000005889 UTR3 Human protein_coding chrX:24231409 chrX:24231425 . . 0 37 hm5C_associated_SNPs_14904 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:24231324-24231430
64251 chrX 38665213 38665213 1 + G A rs143804380 38665198 + 38665178 38665218 41 CCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGGCGTTG CCCGCCGCCCTGCGGTTGGGCCGGTGGAGGCCCAGACGTTG < 41bp 1 0.646143492799542 1 0.425233364105225 experiment 0.707713014400916 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control MID1IP1 ENSG00000165175 UTR3 Human protein_coding chrX:38665198 chrX:38665213 . . 0 36 hm5C_associated_SNPs_14905 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:38665192-38665228
64251 chrX 38665213 38665213 1 + G A rs143804380 38665208 + 38665188 38665228 41 TGCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGC TGCGGTTGGGCCGGTGGAGGCCCAGACGTTGCTAGGATTGC < 41bp 1 0.339824660234174 1 0.38881653547287 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MID1IP1 ENSG00000165175 UTR3 Human protein_coding chrX:38665208 chrX:38665213 . . 0 26 hm5C_associated_SNPs_14906 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:38665192-38665228
64251 chrX 38665213 38665213 1 + G A rs143804380 38665209 + 38665189 38665229 41 GCGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCA GCGGTTGGGCCGGTGGAGGCCCAGACGTTGCTAGGATTGCA < 41bp 1 0.652155871165056 1 0.343832790851593 experiment 0.695688257669887 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MID1IP1 ENSG00000165175 UTR3 Human protein_coding chrX:38665209 chrX:38665213 . . 0 25 hm5C_associated_SNPs_14907 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:38665192-38665228
64251 chrX 38665213 38665213 1 + G A rs143804380 38665210 + 38665190 38665230 41 CGGTTGGGCCGGTGGAGGCCCAGGCGTTGCTAGGATTGCAT CGGTTGGGCCGGTGGAGGCCCAGACGTTGCTAGGATTGCAT < 41bp 1 0.481781334803177 1 0.334898799657822 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control MID1IP1 ENSG00000165175 UTR3 Human protein_coding chrX:38665210 chrX:38665213 . . 0 24 hm5C_associated_SNPs_14908 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:38665192-38665228
64251 chrX 40450506 40450506 1 + C T rs150392503 40450488 + 40450468 40450508 41 GTGCTTTTCAATGTTTAGGACCTTTCTTGGCCAGGACTCGC GTGCTTTTCAATGTTTAGGACCTTTCTTGGCCAGGACTTGC < 41bp 1 0.0226647227190549 1 0.0104721784591675 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450488 chrX:40450506 synonymous SNV . 0 39 hm5C_associated_SNPs_14909 1 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chrX:40450486-40450510
64251 chrX 40944905 40944905 1 + C T rs190296056 40944889 + 40944869 40944909 41 CGCCTCTCTCTCACGGGAGGCGGCCGCCTTAGCGCCCGGTG CGCCTCTCTCTCACGGGAGGCGGCCGCCTTAGCGCCTGGTG < 41bp 1 0.376684758143809 1 0.657053709030151 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP9X ENSG00000124486 UTR5 Human protein_coding chrX:40944889 chrX:40944905 . . 0 37 hm5C_associated_SNPs_14910 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:40944880-40944920
64251 chrX 41193292 41193292 1 + G A rs183894960 41193286 + 41193266 41193306 41 TGAGCTTAGACCTGAGGGAGCGCGCAGTAGCCGGGCAGAAG TGAGCTTAGACCTGAGGGAGCGCGCAATAGCCGGGCAGAAG < 41bp 1 0.55689290836472 1 0.48804047703743 experiment 0.886214183270559 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX3X ENSG00000215301 UTR5 Human protein_coding chrX:41193286 chrX:41193292 . . 0 27 hm5C_associated_SNPs_14911 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:41193276-41193303
64251 chrX 47065741 47065741 1 + C G rs201672447 47065738 + 47065718 47065758 41 GGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCGTA GGCAATGTGCAGGTGGTGATCCCGTTCCTGACAGAGTCGTA < 41bp 1 0.465580134148599 1 0.153965085744858 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47065738 chrX:47065741 synonymous SNV . 0 24 hm5C_associated_SNPs_14912 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:47065740-47065760
64251 chrX 47430973 47430973 1 + C T rs755675686 47430992 + 47430972 47431012 41 ACCCTGGGAGATGAGGGGGTCCCCATGTGCTTTTCCAGTTC ATCCTGGGAGATGAGGGGGTCCCCATGTGCTTTTCCAGTTC < 41bp 1 0.739745902756005 1 0.209109991788864 experiment 0.52050819448799 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47430992 chrX:47430973 . . 0 2 hm5C_associated_SNPs_14913 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47430939-47430984
64251 chrX 47430973 47430973 1 + C T rs755675686 47430993 + 47430973 47431013 41 CCCTGGGAGATGAGGGGGTCCCCATGTGCTTTTCCAGTTCT TCCTGGGAGATGAGGGGGTCCCCATGTGCTTTTCCAGTTCT < 41bp 1 0.347205617007925 1 0.210542142391205 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47430993 chrX:47430973 . . 0 1 hm5C_associated_SNPs_14914 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47430939-47430984
64251 chrX 47431033 47431033 1 + C T rs112568375 47431029 + 47431009 47431049 41 GTTCTTCTGGAATTGGGGGACCCCCGCCAAAGACTGAGCCC GTTCTTCTGGAATTGGGGGACCCCTGCCAAAGACTGAGCCC < 41bp 1 0.394117300120074 1 0.163039326667786 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47431029 chrX:47431033 . . 0 25 hm5C_associated_SNPs_14915 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:47430984-47431034
64251 chrX 47431033 47431033 1 + C T rs112568375 47431030 + 47431010 47431050 41 TTCTTCTGGAATTGGGGGACCCCCGCCAAAGACTGAGCCCC TTCTTCTGGAATTGGGGGACCCCTGCCAAAGACTGAGCCCC < 41bp 1 0.223615768929365 1 0.0710371732711792 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47431030 chrX:47431033 . . 0 24 hm5C_associated_SNPs_14916 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:47430984-47431034
64251 chrX 47431033 47431033 1 + C T rs112568375 47431031 + 47431011 47431051 41 TCTTCTGGAATTGGGGGACCCCCGCCAAAGACTGAGCCCCC TCTTCTGGAATTGGGGGACCCCTGCCAAAGACTGAGCCCCC < 41bp 1 0.316922920057762 1 0.308443605899811 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47431031 chrX:47431033 . . 0 23 hm5C_associated_SNPs_14917 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:47430984-47431034
64251 chrX 47431033 47431033 1 + C T rs112568375 47431032 + 47431012 47431052 41 CTTCTGGAATTGGGGGACCCCCGCCAAAGACTGAGCCCCCT CTTCTGGAATTGGGGGACCCCTGCCAAAGACTGAGCCCCCT < 41bp 1 0.720586212563823 1 0.465850263834 experiment 0.558827574872354 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 UTR3 Human protein_coding chrX:47431032 chrX:47431033 . . 0 22 hm5C_associated_SNPs_14918 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:47430984-47431034
64251 chrX 48344344 48344344 1 + C T rs149911384 48344342 + 48344322 48344362 41 GTCTTACCTCTTCTTTAAACCTCTTCAGGAGTGTCCTGATT GTCTTACCTCTTCTTTAAACCTTTTCAGGAGTGTCCTGATT < 41bp 1 0.0786228939883657 1 0.0439575910568237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FTSJ1 ENSG00000068438 UTR3 Human protein_coding chrX:48344342 chrX:48344344 . . 0 23 hm5C_associated_SNPs_14919 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:48344322-48344349
64251 chrX 48435928 48435928 1 + C G rs235829 48435925 + 48435905 48435945 41 TATAAAGGTTTTTGGAGCTGCACCGAAGCATCTTATTTTAT TATAAAGGTTTTTGGAGCTGCACGGAAGCATCTTATTTTAT < 41bp 1 0.398089227025841 1 0.0809211134910583 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM3 ENSG00000102317 CDS Human protein_coding chrX:48435925 chrX:48435928 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_14920 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:48435900-48435960
64251 chrX 48926243 48926243 1 + G T rs782100459 48926250 + 48926230 48926270 41 ATTCCAATCTGGGGAGCACACAGCTGACCTCGCTGGGCCCT ATTCCAATCTGGGTAGCACACAGCTGACCTCGCTGGGCCCT < 41bp 1 0.780037328188831 1 0.843597173690796 experiment 0.439925343622338 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC120 ENSG00000147144 UTR3 Human protein_coding chrX:48926250 chrX:48926243 . . 0 14 hm5C_associated_SNPs_14921 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:48926229-48926252
64251 chrX 49031026 49031026 1 + G A rs146996859 49031034 + 49031014 49031054 41 CCTGCAGACCCCGCAGATGGCCCGGTGTAGGCGAACTTCCC CCTGCAGACCCCACAGATGGCCCGGTGTAGGCGAACTTCCC < 41bp 1 0.486156765796024 1 0.0902201235294342 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLP2 ENSG00000102007 CDS Human protein_coding chrX:49031034 chrX:49031026 nonsynonymous SNV 0.367 0 13 hm5C_associated_SNPs_14927 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49031020-49031060
64251 chrX 49093646 49093646 1 + G T rs782474626 49093654 + 49093634 49093674 41 GATCAACCCTGCGGTGGGCTCTGGCCTCAGCCCTCTGCTGC GATCAACCCTGCTGTGGGCTCTGGCCTCAGCCCTCTGCTGC < 41bp 1 0.769785425462086 1 0.405545294284821 experiment 0.460429149075827 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093654 chrX:49093646 synonymous SNV . 0 13 hm5C_associated_SNPs_14928 0 0 1 METAP2 POSTAR2 ENCODE chrX:49093611-49093677
64251 chrX 49126656 49126656 1 + C T rs111505885 49126639 + 49126619 49126659 41 AGGCTTGCCCCGAGCCCTCACCGCTGTGCCCCGTCCCCGCT AGGCTTGCCCCGAGCCCTCACCGCTGTGCCCCGTCCCTGCT < 41bp 1 0.3014398902652 1 0.13234007358551 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49126639 chrX:49126656 synonymous SNV . 0 38 hm5C_associated_SNPs_14930 0 0 1 PTBP1 POSTAR2 ENCODE chrX:49126654-49126808
64251 chrX 49689845 49689845 1 + A G rs185140502 49689825 + 49689805 49689845 41 AAAACAGGGCCACATAGCTGCCTTTCTATCAAGTCTCCCTA AAAACAGGGCCACATAGCTGCCTTTCTATCAAGTCTCCCTG < 41bp 1 0.0931191603217765 1 0.00652015209197998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLCN5 ENSG00000171365 UTR5 Human protein_coding chrX:49689825 chrX:49689845 . . 0 41 hm5C_associated_SNPs_14933 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:49689827-49689846
64251 chrX 53223819 53223819 1 - C T rs76525703 53223826 - 53223806 53223846 41 GCCCAGTCCACTGGCATCATCGAGCACGGCCTCCTCTACAA GCCCAGTCCACTGGCATCATCGAGCACAGCCTCCTCTACAA < 41bp 1 0.570143058727418 1 0.916337609291077 experiment 0.859713882545164 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM5C ENSG00000126012 CDS Human protein_coding chrX:53223826 chrX:53223819 synonymous SNV . 0 28 hm5C_associated_SNPs_14934 1 0 8 NOP58 POSTAR2 GSE43666,GSM1067861 chrX:53223794-53223832
64251 chrX 54836361 54836361 1 + A G rs1043031 54836360 + 54836340 54836380 41 GGCACCTGCCACCCAGGCCTCATCTACTACTCAGCTGACTG GGCACCTGCCACCCAGGCCTCGTCTACTACTCAGCTGACTG < 41bp 1 0.187727313635007 1 0.0830460786819458 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836360 chrX:54836361 synonymous SNV . 0 22 hm5C_associated_SNPs_14935 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:54836360-54836380
64251 chrX 54836505 54836505 1 + A G rs1043034 54836504 + 54836484 54836524 41 GGTCAGCCATGTGGCTGATACAAAGGTCAATACAAAGGCTC GGTCAGCCATGTGGCTGATACGAAGGTCAATACAAAGGCTC < 41bp 1 0.789391193663181 1 0.472184747457504 experiment 0.421217612673638 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836504 chrX:54836505 synonymous SNV . 0 22 hm5C_associated_SNPs_14936 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:54836503-54836541
64251 chrX 64887622 64887622 1 + C T rs28384384 64887642 + 64887622 64887662 41 CCGAATCCAAGCCGTGTGTACTGCGTGCTCAGCACTGCCCG TCGAATCCAAGCCGTGTGTACTGCGTGCTCAGCACTGCCCG < 41bp 1 0.736364521687043 1 0.291745841503143 experiment 0.527270956625914 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSN ENSG00000147065 UTR5 Human protein_coding chrX:64887642 chrX:64887622 . . 0 1 hm5C_associated_SNPs_14941 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64887620-64887640
64251 chrX 64887696 64887696 1 + C T rs373874891 64887704 + 64887684 64887724 41 CAACTCCGCTGCCTTTGCCGCCACCATGCCCAAAACGGTGA CAACTCCGCTGCTTTTGCCGCCACCATGCCCAAAACGGTGA < 41bp 1 0.293203387177904 1 0.198740512132645 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MSN ENSG00000147065 UTR5 Human protein_coding chrX:64887704 chrX:64887696 . . 0 13 hm5C_associated_SNPs_14942 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585670 chrX:64887682-64887711
64251 chrX 64887696 64887696 1 + C T rs373874891 64887705 + 64887685 64887725 41 AACTCCGCTGCCTTTGCCGCCACCATGCCCAAAACGGTGAG AACTCCGCTGCTTTTGCCGCCACCATGCCCAAAACGGTGAG < 41bp 1 0.586004545262497 1 0.423947811126709 experiment 0.827990909475007 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MSN ENSG00000147065 UTR5 Human protein_coding chrX:64887705 chrX:64887696 . . 0 12 hm5C_associated_SNPs_14943 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585670 chrX:64887682-64887711
64251 chrX 64960287 64960287 1 + T C rs192766716 64960284 + 64960264 64960304 41 GAGTTATTTAGGCTTTGTAACGATTGGGGGATAAAAAGATG GAGTTATTTAGGCTTTGTAACGACTGGGGGATAAAAAGATG < 41bp 1 0.364281179180483 1 0.737002015113831 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960284 chrX:64960287 . . 0 24 hm5C_associated_SNPs_14944 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64960260-64960300
64251 chrX 64960801 64960801 1 + A G rs13731 64960798 + 64960778 64960818 41 AGCTCCTGCTCCACAGCCATCCCAGCCTTGGCATCTAGAGC AGCTCCTGCTCCACAGCCATCCCGGCCTTGGCATCTAGAGC < 41bp 1 0.433475385798084 1 0.197098582983017 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960798 chrX:64960801 . . 0 24 hm5C_associated_SNPs_14945 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chrX:64960776-64960809
64251 chrX 64960801 64960801 1 + A G rs13731 64960799 + 64960779 64960819 41 GCTCCTGCTCCACAGCCATCCCAGCCTTGGCATCTAGAGCT GCTCCTGCTCCACAGCCATCCCGGCCTTGGCATCTAGAGCT < 41bp 1 0.433068913313903 1 0.324598371982574 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960799 chrX:64960801 . . 0 23 hm5C_associated_SNPs_14946 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chrX:64960776-64960809
64251 chrX 64960801 64960801 1 + A G rs13731 64960800 + 64960780 64960820 41 CTCCTGCTCCACAGCCATCCCAGCCTTGGCATCTAGAGCTT CTCCTGCTCCACAGCCATCCCGGCCTTGGCATCTAGAGCTT < 41bp 1 0.676485852944306 1 0.797221958637238 experiment 0.647028294111389 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960800 chrX:64960801 . . 0 22 hm5C_associated_SNPs_14947 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chrX:64960776-64960809
64251 chrX 64961206 64961206 1 + T C rs188822868 64961200 + 64961180 64961220 41 TTCTGCCTTCCTTGCTAATGCACCATTAGAAGATATTAGTC TTCTGCCTTCCTTGCTAATGCACCATCAGAAGATATTAGTC < 41bp 1 0.554775942742309 1 0.556874334812164 experiment 0.890448114515382 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MSN ENSG00000147065 UTR3 Human protein_coding chrX:64961200 chrX:64961206 . . 0 27 hm5C_associated_SNPs_14948 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64961140-64961240
64251 chrX 69622462 69622462 1 + A G rs760173748 69622447 + 69622427 69622467 41 TTGCTGACCTACAGCAGAAGCTGCTGGATGCAGAAAGTGAA TTGCTGACCTACAGCAGAAGCTGCTGGATGCAGAAGGTGAA < 41bp 1 0.367782549971193 1 0.0833665132522583 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69622447 chrX:69622462 nonsynonymous SNV 0.999 1 36 hm5C_associated_SNPs_14959 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:69622457-69622493
64251 chrX 70356372 70356372 1 + T C rs201843482 70356356 + 70356336 70356376 41 TGCCCCCAGAAGATGAGGAGCCGCCTGCTCCTACCCTGCTA TGCCCCCAGAAGATGAGGAGCCGCCTGCTCCTACCCCGCTA < 41bp 1 0.168985988461919 1 0.0835151672363281 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70356356 chrX:70356372 nonsynonymous SNV 0.987 0 37 hm5C_associated_SNPs_14960 0 0 1 RPS3 POSTAR2 ENCODE chrX:70356337-70356405
64251 chrX 70777435 70777435 1 + G A rs34739713 70777454 + 70777434 70777474 41 TGCATCCTCATCATAGTATGCTATATCCTCTTTCTCATGGC TACATCCTCATCATAGTATGCTATATCCTCTTTCTCATGGC < 41bp 1 0.365791907973 1 0.148329377174377 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70777454 chrX:70777435 synonymous SNV . 0 2 hm5C_associated_SNPs_14961 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:70777346-70777449
64251 chrX 70794241 70794241 1 + A G rs183943406 70794243 + 70794223 70794263 41 GACCTAATATTTGGAGCTATCAGTGCTTTGTTGATTTAGAT GACCTAATATTTGGAGCTGTCAGTGCTTTGTTGATTTAGAT < 41bp 1 0.362474377173518 1 0.769671022891998 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCYRN1 ENSG00000147162 UTR3 Human protein_coding chrX:70794243 chrX:70794241 . . 0 19 hm5C_associated_SNPs_14962 0 0 32 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70794062-70794287
64251 chrX 70795516 70795516 1 + G A rs191878713 70795528 + 70795508 70795548 41 CCTGGCACGAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTA CCTGGCACAAAAAGTAGCCGCTCTGGTTGAAGCTTTGCTTA < 41bp 1 0.549124755479698 1 0.445410281419754 experiment 0.901750489040604 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BCYRN1 ENSG00000147162 UTR3 Human protein_coding chrX:70795528 chrX:70795516 . . 0 9 hm5C_associated_SNPs_14963 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:70795469-70795561
64251 chrX 73040640 73040640 1 - G C rs369296409 73040659 - 73040639 73040679 41 AAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATCT AAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATGT < 41bp 1 0.153114316388676 1 0.134533315896988 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040659 chrX:73040640 . . 0 40 hm5C_associated_SNPs_14964 0 0 77 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040911 73040911 1 - T C rs148394722 73040931 - 73040911 73040951 41 AGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGATTA AGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGATTG < 41bp 1 0.633251951302989 1 0.782095670700073 experiment 0.733496097394022 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040931 chrX:73040911 . . 0 41 hm5C_associated_SNPs_14965 0 0 78 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:73040433-73040993
64251 chrX 73042022 73042022 1 - A C rs780532376 73042026 - 73042006 73042046 41 CCCTCATGAAAAATGACTGACCACTGCTGGGCAGCAGGAGG CCCTCATGAAAAATGACTGACCACGGCTGGGCAGCAGGAGG < 41bp 1 0.116464365682529 1 0.158545911312103 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042026 chrX:73042022 . . 0 25 hm5C_associated_SNPs_14966 0 0 60 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73040480-73042460
64251 chrX 73042916 73042916 1 - T C rs5982487 73042925 - 73042905 73042945 41 GTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGACATAT GTATTTGCTCATTGGTCTGGCTTAGAGACGGGAAGACATAT < 41bp 1 0.0534747736036175 1 0.0647725760936737 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042925 chrX:73042916 . . 0 30 hm5C_associated_SNPs_14967 0 0 52 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73042916 73042916 1 - T C rs5982487 73042929 - 73042909 73042949 41 AAAGGTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGAC AAAGGTATTTGCTCATTGGTCTGGCTTAGAGACGGGAAGAC < 41bp 1 0.196617765038959 1 0.298234760761261 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042929 chrX:73042916 . . 0 34 hm5C_associated_SNPs_14968 0 0 52 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043297 73043297 1 - G A rs138595829 73043299 - 73043279 73043319 41 GAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAA GAGAGATGAGGGCATTAGATCATTGACAGCTGAAGATAGAA < 41bp 1 0.053552669303959 1 0.0774983167648315 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043299 chrX:73043297 . . 0 23 hm5C_associated_SNPs_14969 0 0 65 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043297 73043297 1 - G A rs138595829 73043307 - 73043287 73043327 41 GAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGA GAGGATAAGAGAGATGAGGGCATTAGATCATTGACAGCTGA < 41bp 1 0.0832670765911892 1 0.104824423789978 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043307 chrX:73043297 . . 0 31 hm5C_associated_SNPs_14970 0 0 65 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043734 73043734 1 - G T rs144341862 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTCGGAACTACATGACCTAGGATATAAAAATGATGTT < 41bp 1 0.359590025680592 1 0.468106210231781 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043734 . . 0 19 hm5C_associated_SNPs_14971 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043734 73043734 1 - G T rs144341862 73043738 - 73043718 73043758 41 TTCTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT TTCTGTGGGGCTCGGAACTACATGACCTAGGATATAAAAAT < 41bp 1 0.217445037533946 1 0.179369360208511 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043738 chrX:73043734 . . 0 25 hm5C_associated_SNPs_14972 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043734 73043734 1 - G T rs144341862 73043746 - 73043726 73043766 41 TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGGAT TGATTACTTTCTGTGGGGCTCGGAACTACATGACCTAGGAT < 41bp 1 0.28072896372957 1 0.768303096294403 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043746 chrX:73043734 . . 0 33 hm5C_associated_SNPs_14973 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043734 73043734 1 - G T rs144341862 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG GGTGATTACTTTCTGTGGGGCTCGGAACTACATGACCTAGG < 41bp 1 0.241036621025157 1 0.280334413051605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043734 . . 0 35 hm5C_associated_SNPs_14974 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043793 73043793 1 - C T rs148757364 73043778 - 73043758 73043798 41 AGATAGGAATGAACTATTGGCTTACTGAATGGTGATTACTT AGATAAGAATGAACTATTGGCTTACTGAATGGTGATTACTT < 41bp 1 0.0206443823419456 1 0.034942090511322 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043778 chrX:73043793 . . 0 6 hm5C_associated_SNPs_14975 0 0 55 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043798 73043798 1 - T C rs141214761 73043778 - 73043758 73043798 41 AGATAGGAATGAACTATTGGCTTACTGAATGGTGATTACTT GGATAGGAATGAACTATTGGCTTACTGAATGGTGATTACTT < 41bp 1 0.0222254448452573 1 0.0367239713668823 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043778 chrX:73043798 . . 0 1 hm5C_associated_SNPs_14976 0 0 52 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73045232 73045232 1 - C G rs41305401 73045215 - 73045195 73045235 41 TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA TGTCATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA < 41bp 1 0.332413124742665 1 0.443327456712723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045215 chrX:73045232 . . 0 4 hm5C_associated_SNPs_14977 0 0 55 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045740 73045740 1 - A C rs1794213 73045745 - 73045725 73045765 41 GAGAACCTGGGACTGTTGAGCATGTTTAATACTTTCCTTGA GAGAACCTGGGACTGTTGAGCATGTGTAATACTTTCCTTGA < 41bp 1 0.172592278600284 1 0.80276894569397 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045745 chrX:73045740 . . 0 26 hm5C_associated_SNPs_14978 0 0 91 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045740 73045740 1 - A C rs1794213 73045753 - 73045733 73045773 41 AAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATACT AAAGATGAGAGAACCTGGGACTGTTGAGCATGTGTAATACT < 41bp 1 0.0410911400807021 1 0.0655647814273834 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045753 chrX:73045740 . . 0 34 hm5C_associated_SNPs_14979 0 0 91 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045740 73045740 1 - A C rs1794213 73045760 - 73045740 73045780 41 TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTT TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTG < 41bp 1 0.0611199041548954 1 0.164002746343613 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045760 chrX:73045740 . . 0 41 hm5C_associated_SNPs_14980 0 0 91 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045745 73045745 1 - G A rs41303699 73045753 - 73045733 73045773 41 AAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATACT AAAGATGAGAGAACCTGGGACTGTTGAGTATGTTTAATACT < 41bp 1 0.0411102432271814 1 0.0990611910820007 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045753 chrX:73045745 . . 0 29 hm5C_associated_SNPs_14981 0 0 95 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045745 73045745 1 - G A rs41303699 73045760 - 73045740 73045780 41 TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTT TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGTATGTT < 41bp 1 0.0395414799265546 1 0.174728631973267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045760 chrX:73045745 . . 0 36 hm5C_associated_SNPs_14982 0 0 95 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045801 73045801 1 - G A rs12009304 73045800 - 73045780 73045820 41 GGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATCTCT GGACTGTGCCAACGCTACTTCTGGGTTTAATACCCATCTCT < 41bp 1 0.634618315326465 1 0.658986747264862 experiment 0.73076336934707 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045800 chrX:73045801 . . 0 20 hm5C_associated_SNPs_14983 0 0 90 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045801 73045801 1 - G A rs12009304 73045803 - 73045783 73045823 41 GGTGGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATC GGTGGACTGTGCCAACGCTACTTCTGGGTTTAATACCCATC < 41bp 1 0.124097249948534 1 0.0926186442375183 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045803 chrX:73045801 . . 0 23 hm5C_associated_SNPs_14984 0 0 90 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045801 73045801 1 - G A rs12009304 73045808 - 73045788 73045828 41 AATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAATAC AATTTGGTGGACTGTGCCAACGCTACTTCTGGGTTTAATAC < 41bp 1 0.381315971458235 1 0.0799453258514404 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045808 chrX:73045801 . . 0 28 hm5C_associated_SNPs_14985 0 0 90 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045801 73045801 1 - G A rs12009304 73045811 - 73045791 73045831 41 AATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAA AATAATTTGGTGGACTGTGCCAACGCTACTTCTGGGTTTAA < 41bp 1 0.293926615467813 1 0.563978016376495 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045811 chrX:73045801 . . 0 31 hm5C_associated_SNPs_14986 0 0 90 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045801 73045801 1 - G A rs12009304 73045812 - 73045792 73045832 41 AAATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTA AAATAATTTGGTGGACTGTGCCAACGCTACTTCTGGGTTTA < 41bp 1 0.0435938466465326 1 0.197122812271118 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045812 chrX:73045801 . . 0 32 hm5C_associated_SNPs_14987 0 0 90 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045807 73045807 1 - C T rs180926896 73045800 - 73045780 73045820 41 GGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATCTCT GGACTGTGCCAACACTACTCCTGGGTTTAATACCCATCTCT < 41bp 1 0.51117343076411 1 0.557793200016022 experiment 0.977653138471781 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045800 chrX:73045807 . . 0 14 hm5C_associated_SNPs_14988 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045807 73045807 1 - C T rs180926896 73045803 - 73045783 73045823 41 GGTGGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATC GGTGGACTGTGCCAACACTACTCCTGGGTTTAATACCCATC < 41bp 1 0.337421386664246 1 0.198671340942383 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045803 chrX:73045807 . . 0 17 hm5C_associated_SNPs_14989 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045807 73045807 1 - C T rs180926896 73045808 - 73045788 73045828 41 AATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAATAC AATTTGGTGGACTGTGCCAACACTACTCCTGGGTTTAATAC < 41bp 1 0.350942281124576 1 0.0360265076160431 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045808 chrX:73045807 . . 0 22 hm5C_associated_SNPs_14990 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045807 73045807 1 - C T rs180926896 73045811 - 73045791 73045831 41 AATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAA AATAATTTGGTGGACTGTGCCAACACTACTCCTGGGTTTAA < 41bp 1 0.45546575616072 1 0.400877863168716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045811 chrX:73045807 . . 0 25 hm5C_associated_SNPs_14991 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045807 73045807 1 - C T rs180926896 73045812 - 73045792 73045832 41 AAATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTA AAATAATTTGGTGGACTGTGCCAACACTACTCCTGGGTTTA < 41bp 1 0.0314470005245026 1 0.17556357383728 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045812 chrX:73045807 . . 0 26 hm5C_associated_SNPs_14992 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045809 73045809 1 - T C rs16992442 73045800 - 73045780 73045820 41 GGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATCTCT GGACTGTGCCAGCGCTACTCCTGGGTTTAATACCCATCTCT < 41bp 1 0.632270059121515 1 0.589413940906525 experiment 0.735459881756969 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045800 chrX:73045809 . . 0 12 hm5C_associated_SNPs_14993 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045809 73045809 1 - T C rs16992442 73045803 - 73045783 73045823 41 GGTGGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATC GGTGGACTGTGCCAGCGCTACTCCTGGGTTTAATACCCATC < 41bp 1 0.300529048092497 1 0.32965612411499 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045803 chrX:73045809 . . 0 15 hm5C_associated_SNPs_14994 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045809 73045809 1 - T C rs16992442 73045808 - 73045788 73045828 41 AATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAATAC AATTTGGTGGACTGTGCCAGCGCTACTCCTGGGTTTAATAC < 41bp 1 0.38012652306919 1 0.0703544318675995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045808 chrX:73045809 . . 0 20 hm5C_associated_SNPs_14995 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045809 73045809 1 - T C rs16992442 73045811 - 73045791 73045831 41 AATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAA AATAATTTGGTGGACTGTGCCAGCGCTACTCCTGGGTTTAA < 41bp 1 0.472955054461466 1 0.680680096149445 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045811 chrX:73045809 . . 0 23 hm5C_associated_SNPs_14996 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045809 73045809 1 - T C rs16992442 73045812 - 73045792 73045832 41 AAATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTA AAATAATTTGGTGGACTGTGCCAGCGCTACTCCTGGGTTTA < 41bp 1 0.1016179505465 1 0.48116534948349 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045812 chrX:73045809 . . 0 24 hm5C_associated_SNPs_14997 0 0 77 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73046038 73046038 1 - C T rs148867747 73046036 - 73046016 73046056 41 TGTGAAGAGATGCTCCAGGCCAATGAGAAGAATTAGACAAG TGTGAAGAGATGCTCCAGACCAATGAGAAGAATTAGACAAG < 41bp 1 0.137413099717597 1 0.194092154502869 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046036 chrX:73046038 . . 0 19 hm5C_associated_SNPs_14998 0 0 92 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046031-73046061
64251 chrX 73046556 73046556 1 - C T rs151282405 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACAGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA < 41bp 1 0.0689809620922822 1 0.248574733734131 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046556 . . 0 4 hm5C_associated_SNPs_14999 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046556 73046556 1 - C T rs151282405 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCGAAAAAGGTATCTCAAGACTAACAGCCGGAAT < 41bp 1 0.704515236967876 1 0.617640614509583 experiment 0.590969526064248 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046556 . . 0 33 hm5C_associated_SNPs_15000 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046557 73046557 1 - G A rs16992443 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AATGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA < 41bp 1 0.0844669753477662 1 0.156822592020035 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046557 . . 0 3 hm5C_associated_SNPs_15001 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046557 73046557 1 - G A rs16992443 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCGAAAAAGGTATCTCAAGACTAATGGCCGGAAT < 41bp 1 0.72606765000283 1 0.786868810653687 experiment 0.547864699994339 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046557 . . 0 32 hm5C_associated_SNPs_15002 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046584 73046584 1 - G A rs183234357 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCTAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT < 41bp 1 0.678402644211613 1 0.70807158946991 experiment 0.643194711576774 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046584 . . 0 5 hm5C_associated_SNPs_15003 0 0 64 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046584 73046584 1 - G A rs183234357 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGATAGAGGACCTAAGCGAAAAAGGTATCTCA < 41bp 1 0.190055374460572 1 0.101188719272614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046584 . . 0 22 hm5C_associated_SNPs_15004 0 0 64 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046774 73046774 1 - C A rs191884965 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA TTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA < 41bp 1 0.523418005259652 1 0.155743896961212 experiment 0.953163989480696 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046774 . . 0 1 hm5C_associated_SNPs_15005 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046774 73046774 1 - C A rs191884965 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTGATTTGGATGGAAGTCTC < 41bp 1 0.304431196502295 1 0.319349765777588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046774 . . 0 26 hm5C_associated_SNPs_15006 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046774 73046774 1 - C A rs191884965 73046786 - 73046766 73046806 41 AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGG AGAGGGTGGCCTGAATTGGACCGAAGGCCTGATTTGGATGG < 41bp 1 0.348220354701879 1 0.177191168069839 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046786 chrX:73046774 . . 0 33 hm5C_associated_SNPs_15007 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73047076 73047076 1 - G A rs187945496 73047096 - 73047076 73047116 41 GGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAAC GGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAAT < 41bp 1 0.103390809016814 1 0.293791383504868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047096 chrX:73047076 . . 0 41 hm5C_associated_SNPs_15008 0 0 79 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chrX 100647142 100647142 1 + A G rs190593323 100647138 + 100647118 100647158 41 TTCCTTATCTGTCAATATGTCTGAATCCTCGCTTGTTGGTT TTCCTTATCTGTCAATATGTCTGAGTCCTCGCTTGTTGGTT < 41bp 1 0.480039872863917 1 0.355627238750458 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL36A ENSG00000241343;ENSG00000257529 intronic Human other chrX:100647138 chrX:100647142 . . 0 25 hm5C_associated_SNPs_15015 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:100647120-100647215
64251 chrX 102470054 102470054 1 + G A rs3747300 102470063 + 102470043 102470083 41 GTCTCGCTCTGGCGTCAGAGCCGTCGTGGCTCGTTCCATTC GTCTCGCTCTGACGTCAGAGCCGTCGTGGCTCGTTCCATTC < 41bp 1 0.304646735262934 1 0.107858449220657 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BEX4 ENSG00000102409 UTR5 Human protein_coding chrX:102470063 chrX:102470054 . . 0 12 hm5C_associated_SNPs_15016 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:102470040-102470060
64251 chrX 103434399 103434399 1 + G A rs140348929 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAAGTG < 41bp 1 0.276997405047127 1 0.0659781694412231 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434399 synonymous SNV . 0 38 hm5C_associated_SNPs_15017 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:103434380-103434420
64251 chrX 106893247 106893247 1 + C T rs147731055 106893248 + 106893228 106893268 41 CCGTTTCTTACCTATTCAGCCATGTCCCTTTATAATAGAGT CCGTTTCTTACCTATTCAGTCATGTCCCTTTATAATAGAGT < 41bp 1 0.068655392456067 1 0.106963068246841 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893248 chrX:106893247 synonymous SNV . 0 20 hm5C_associated_SNPs_15019 2 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 106893247 106893247 1 + C T rs147731055 106893253 + 106893233 106893273 41 TCTTACCTATTCAGCCATGTCCCTTTATAATAGAGTAACTT TCTTACCTATTCAGTCATGTCCCTTTATAATAGAGTAACTT < 41bp 1 0.0786226963761706 1 0.0585769414901733 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893253 chrX:106893247 synonymous SNV . 0 15 hm5C_associated_SNPs_15020 2 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 107834411 107834411 1 + C A rs142883891 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGATCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT < 41bp 1 0.599465874889599 1 0.877705752849579 experiment 0.801068250220802 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834411 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_15024 2 0 3 NOL12 POSTAR2 ENCODE chrX:107834377-107834427
64251 chrX 107909790 107909790 1 + T G rs61735627 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCGAAAAAGGCAAACCCGGTCAAGATGGGATTCCTGGACCA < 41bp 1 0.770104029589891 1 0.787156164646149 experiment 0.459791940820218 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909790 synonymous SNV . 0 29 hm5C_associated_SNPs_15025 1 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:107909780-107909800
64251 chrX 118602448 118602448 1 + C A rs765328027 118602468 + 118602448 118602488 41 CGTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGACAGATG AGTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGACAGATG < 41bp 1 0.407015477436063 1 0.15003889799118 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A5-AS1 ENSG00000224281 ncRNA_exonic Human processed_transcript chrX:118602468 chrX:118602448 . . 0 1 hm5C_associated_SNPs_15027 0 0 44 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:118602380-118602460
64251 chrX 123046787 123046787 1 + C T rs149254603 123046781 + 123046761 123046801 41 GCTGGGATTACAGGCGTGAGCCACCACGGCCGGCTAATTTT GCTGGGATTACAGGCGTGAGCCACCATGGCCGGCTAATTTT < 41bp 1 0.58777845003217 1 0.113993018865585 experiment 0.824443099935661 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control XIAP ENSG00000101966 UTR3 Human protein_coding chrX:123046781 chrX:123046787 . . 0 27 hm5C_associated_SNPs_15028 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:123046761-123046796
64251 chrX 128691328 128691328 1 + G C rs753369725 128691345 + 128691325 128691365 41 GGGGACTGGATCAGAGAGCGCCGCTTTGAAATCCCTGATGA GGGCACTGGATCAGAGAGCGCCGCTTTGAAATCCCTGATGA < 41bp 1 0.353916578071219 1 0.0554416477680206 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128691345 chrX:128691328 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_15029 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chrX:128691308-128691332
64251 chrX 128695228 128695228 1 + G A rs138260625 128695224 + 128695204 128695244 41 TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGTT TGTGAAGGAACAAGAATGGTCCATAGCTGTAGAGAGAGGTT < 41bp 1 0.130548622459759 1 0.0388039350509644 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128695224 chrX:128695228 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_15030 2 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:128695166-128695244
64251 chrX 128695243 128695243 1 + T G rs190659938 128695224 + 128695204 128695244 41 TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGTT TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGGT < 41bp 1 0.0732192745539036 1 0.110553532838821 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128695224 chrX:128695243 synonymous SNV . 0 40 hm5C_associated_SNPs_15031 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:128695166-128695244
64251 chrX 129149417 129149417 1 + G A rs201843717 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAACCACAGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC < 41bp 1 0.0207804451983159 1 0.145901262760162 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149417 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_15032 1 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149400-129149420
64251 chrX 129185892 129185892 1 + A C rs373569866 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG ATCCTCCTGGGAGCTCAGATCCAGAAGGAGACGATCCGATG < 41bp 1 0.459406910540981 1 0.796919226646423 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185892 nonsynonymous SNV 0.974 2 22 hm5C_associated_SNPs_15033 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chrX:129185892-129185893
64251 chrX 129535961 129535961 1 + C T rs16999683 129535973 + 129535953 129535993 41 TGCGCTGCCTTTCCCGGGCGCTGATTCCTGAGTGCTGAGCG TGCGCTGCTTTTCCCGGGCGCTGATTCCTGAGTGCTGAGCG < 41bp 1 0.445570825907064 1 0.0220198035240173 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBMX2 ENSG00000134597 UTR5 Human protein_coding chrX:129535973 chrX:129535961 . . 0 9 hm5C_associated_SNPs_15034 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chrX:129535951-129535982
64251 chrX 131202543 131202543 1 + A T rs569986933 131202534 + 131202514 131202554 41 ACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG ACACAGATTAAAAGAAATACCTTTGTGGGTACTCCATTTTG < 41bp 1 0.343573461397665 1 0.0295723378658295 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK26 ENSG00000134602 CDS Human protein_coding chrX:131202534 chrX:131202543 synonymous SNV . 0 30 hm5C_associated_SNPs_15036 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:131202519-131202555
64251 chrX 133594293 133594293 1 + C G rs747134233 133594312 + 133594292 133594332 41 ACCGGCTTCCTCCTCCTGAGCAGTCAGCCCGCGCGCCGGCC AGCGGCTTCCTCCTCCTGAGCAGTCAGCCCGCGCGCCGGCC < 41bp 1 0.558826215456604 1 0.19597589969635 experiment 0.882347569086791 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HPRT1 ENSG00000165704 UTR5 Human protein_coding chrX:133594312 chrX:133594293 . . 0 2 hm5C_associated_SNPs_15037 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:133594220-133594300
64251 chrX 133594321 133594321 1 + C A rs776633368 133594312 + 133594292 133594332 41 ACCGGCTTCCTCCTCCTGAGCAGTCAGCCCGCGCGCCGGCC ACCGGCTTCCTCCTCCTGAGCAGTCAGCCAGCGCGCCGGCC < 41bp 1 0.56193486718135 1 0.133972853422165 experiment 0.876130265637301 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HPRT1 ENSG00000165704 UTR5 Human protein_coding chrX:133594312 chrX:133594321 . . 0 30 hm5C_associated_SNPs_15038 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:133594220-133594360
64251 chrX 133594321 133594321 1 + C A rs776633368 133594332 + 133594312 133594352 41 CAGTCAGCCCGCGCGCCGGCCGGCTCCGTTATGGCGACCCG CAGTCAGCCAGCGCGCCGGCCGGCTCCGTTATGGCGACCCG < 41bp 1 0.728871338534056 1 0.101833820343018 experiment 0.542257322931887 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HPRT1 ENSG00000165704 UTR5 Human protein_coding chrX:133594332 chrX:133594321 . . 0 10 hm5C_associated_SNPs_15039 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:133594220-133594360
64251 chrX 135127228 135127228 1 + G A rs180710014 135127220 + 135127200 135127240 41 CTGACACTTAACCAGAGTACCAGTTCTCGTGATGTGAATTA CTGACACTTAACCAGAGTACCAGTTCTCATGATGTGAATTA < 41bp 1 0.192693090244147 1 0.129339188337326 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC9A6 ENSG00000198689 UTR3 Human protein_coding chrX:135127220 chrX:135127228 . . 0 29 hm5C_associated_SNPs_15041 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135127197-135127281
64251 chrX 135594255 135594255 1 + C G rs185621465 135594249 + 135594229 135594269 41 GGTAATTACTAGTAGTGTTACATGAACATGTGCATAGTGGT GGTAATTACTAGTAGTGTTACATGAAGATGTGCATAGTGGT < 41bp 1 0.661986711706357 1 0.101607650518417 experiment 0.676026576587287 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTATSF1 ENSG00000102241 UTR3 Human protein_coding chrX:135594249 chrX:135594255 . . 0 27 hm5C_associated_SNPs_15042 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135594104-135594332
64251 chrX 149896168 149896168 1 + A G rs138576798 149896183 + 149896163 149896203 41 ATTTTATCCTTGATGTTCCCCTTGGAGTGATCAGCAGAGTG ATTTTGTCCTTGATGTTCCCCTTGGAGTGATCAGCAGAGTG < 41bp 1 0.326783293063526 1 0.0384005606174469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149896183 chrX:149896168 nonsynonymous SNV 0.943 1 6 hm5C_associated_SNPs_15045 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:149896163-149896196
64251 chrX 150565702 150565702 1 + C T rs188254053 150565692 + 150565672 150565712 41 ACCGCTACTTCCGGTGCGAACCGCCTCGGCCGTTCCCTCGC ACCGCTACTTCCGGTGCGAACCGCCTCGGCTGTTCCCTCGC < 41bp 1 0.628563727146466 1 0.270371913909912 experiment 0.742872545707068 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VMA21 ENSG00000160131 UTR5 Human protein_coding chrX:150565692 chrX:150565702 . . 0 31 hm5C_associated_SNPs_15046 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585667 chrX:150565694-150565721
64251 chrX 152037431 152037431 1 + G T rs139186585 152037426 + 152037406 152037446 41 GCCCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT GCCCCCAAGTACCACATCCCCTACTTGGTGGCCTACTACCT < 41bp 1 0.49406477287083 1 0.0275346636772156 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037426 chrX:152037431 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_15049 0 0 2 RPS3 POSTAR2 ENCODE chrX:152037421-152037505
64251 chrX 152616081 152616081 1 + G A rs56076412 152616074 + 152616054 152616094 41 GGCCTGGCAAGGAAGTGTGCCCTTCTCGTGGGCCCACCAAG GGCCTGGCAAGGAAGTGTGCCCTTCTCATGGGCCCACCAAG < 41bp 1 0.0449157620145285 1 0.0215712189674377 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF275 ENSG00000063587 UTR3 Human protein_coding chrX:152616074 chrX:152616081 . . 0 28 hm5C_associated_SNPs_15050 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:152616061-152616091
64251 chrX 152954116 152954116 1 + G A rs782373793 152954118 + 152954098 152954138 41 CGCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCC CGCGCCCGGGCCCGACGGAGCCCCGGCCAAGGGCGACGGCC < 41bp 1 0.419936112431863 1 0.252965152263641 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954118 chrX:152954116 synonymous SNV . 0 19 hm5C_associated_SNPs_15051 1 0 12 BUD13 POSTAR2 ENCODE chrX:152954072-152954135
64251 chrX 152954116 152954116 1 + G A rs782373793 152954119 + 152954099 152954139 41 GCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCCC GCGCCCGGGCCCGACGGAGCCCCGGCCAAGGGCGACGGCCC < 41bp 1 0.682537941725131 1 0.315885692834854 experiment 0.634924116549738 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954119 chrX:152954116 synonymous SNV . 0 18 hm5C_associated_SNPs_15052 1 0 12 BUD13 POSTAR2 ENCODE chrX:152954072-152954135
64251 chrX 153031719 153031719 1 + G A rs12009053 153031732 + 153031712 153031752 41 CGCGGCTGCCTGGCTCTTTCCCCCAGCTGCGGAGGGTTCCT CGCGGCTACCTGGCTCTTTCCCCCAGCTGCGGAGGGTTCCT < 41bp 1 0.302570699085143 1 0.844798445701599 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153031732 chrX:153031719 synonymous SNV . 0 8 hm5C_associated_SNPs_15056 0 0 2 RBFOX2 POSTAR2 ENCODE chrX:153031705-153031770
64251 chrX 153238288 153238288 1 + A C rs6655268 153238268 + 153238248 153238288 41 CCCCAGCGAGGCGAGTGAGGCGAAATACCCGTATGGTGATA CCCCAGCGAGGCGAGTGAGGCGAAATACCCGTATGGTGATC < 41bp 1 0.53204074882106 1 0.83087682723999 experiment 0.93591850235788 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM187 ENSG00000177854 UTR5 Human protein_coding chrX:153238268 chrX:153238288 . . 0 41 hm5C_associated_SNPs_15058 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:153238276-153238295
64251 chrX 153608120 153608120 1 + C A rs782051850 153608138 + 153608118 153608158 41 CCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA CCAAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA < 41bp 1 0.397354706097639 1 0.108044028282166 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608138 chrX:153608120 synonymous SNV . 0 3 hm5C_associated_SNPs_15059 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chrX 153608120 153608120 1 + C A rs782051850 153608140 + 153608120 153608160 41 CAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA AAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA < 41bp 1 0.245959422634764 1 0.117885857820511 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608140 chrX:153608120 synonymous SNV . 0 1 hm5C_associated_SNPs_15060 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chrX 153626649 153626649 1 + A C rs915941 153626641 + 153626621 153626661 41 CGTCTGACAGAGCGTCCACCCGTCTTCGACAGGACTCTATG CGTCTGACAGAGCGTCCACCCGTCTTCGCCAGGACTCTATG < 41bp 1 0.243203948354332 1 0.11982387304306 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 UTR5 Human protein_coding chrX:153626641 chrX:153626649 . . 0 29 hm5C_associated_SNPs_15061 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chrX:153626648-153626670
64251 chrX 153658754 153658754 1 + C T rs59887267 153658744 + 153658724 153658764 41 CAAACTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC CAAACTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCC < 41bp 1 0.636218251257012 1 0.634770035743713 experiment 0.727563497485976 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658744 chrX:153658754 . . 0 31 hm5C_associated_SNPs_15062 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658754 153658754 1 + C T rs59887267 153658750 + 153658730 153658770 41 GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAG GCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTGTGAG < 41bp 1 0.377531552726873 1 0.105525821447372 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658750 chrX:153658754 . . 0 25 hm5C_associated_SNPs_15063 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658754 153658754 1 + C T rs59887267 153658751 + 153658731 153658771 41 CTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGG CTGGGATTACAGGCGTGAGCCACTGCGCCCGGCCTGTGAGG < 41bp 1 0.327481799104483 1 0.517914533615112 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658751 chrX:153658754 . . 0 24 hm5C_associated_SNPs_15064 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658754 153658754 1 + C T rs59887267 153658753 + 153658733 153658773 41 GGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGGGG GGGATTACAGGCGTGAGCCACTGCGCCCGGCCTGTGAGGGG < 41bp 1 0.580809967205209 1 0.72100442647934 experiment 0.838380065589581 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658753 chrX:153658754 . . 0 22 hm5C_associated_SNPs_15065 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658761 153658761 1 + G T rs180677460 153658744 + 153658724 153658764 41 CAAACTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC CAAACTGCTGGGATTACAGGCGTGAGCCACCGCGCCCTGCC < 41bp 1 0.671313769877633 1 0.549489617347717 experiment 0.657372460244735 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658744 chrX:153658761 . . 0 38 hm5C_associated_SNPs_15066 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658761 153658761 1 + G T rs180677460 153658750 + 153658730 153658770 41 GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAG GCTGGGATTACAGGCGTGAGCCACCGCGCCCTGCCTGTGAG < 41bp 1 0.297258857543806 1 0.202165573835373 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658750 chrX:153658761 . . 0 32 hm5C_associated_SNPs_15067 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658761 153658761 1 + G T rs180677460 153658751 + 153658731 153658771 41 CTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGG CTGGGATTACAGGCGTGAGCCACCGCGCCCTGCCTGTGAGG < 41bp 1 0.496553146960057 1 0.729472160339355 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658751 chrX:153658761 . . 0 31 hm5C_associated_SNPs_15068 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658761 153658761 1 + G T rs180677460 153658753 + 153658733 153658773 41 GGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGGGG GGGATTACAGGCGTGAGCCACCGCGCCCTGCCTGTGAGGGG < 41bp 1 0.30328473598926 1 0.428525537252426 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658753 chrX:153658761 . . 0 29 hm5C_associated_SNPs_15069 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153658761 153658761 1 + G T rs180677460 153658754 + 153658734 153658774 41 GGATTACAGGCGTGAGCCACCGCGCCCGGCCTGTGAGGGGG GGATTACAGGCGTGAGCCACCGCGCCCTGCCTGTGAGGGGG < 41bp 1 0.543364332779774 1 0.753194272518158 experiment 0.913271334440452 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6AP1 ENSG00000071553 UTR3 Human protein_coding chrX:153658754 chrX:153658761 . . 0 28 hm5C_associated_SNPs_15070 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:153658753-153658786
64251 chrX 153672533 153672533 1 + T C rs782630744 153672547 + 153672527 153672567 41 TGTCGCTGTCGCCGCCGCCGCCGCCCGCCGCCGCCGCCGCC TGTCGCCGTCGCCGCCGCCGCCGCCCGCCGCCGCCGCCGCC < 41bp 1 0.601857527572218 1 0.506554186344147 experiment 0.796284944855564 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM50A ENSG00000071859 UTR5 Human protein_coding chrX:153672547 chrX:153672533 . . 0 7 hm5C_associated_SNPs_15071 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:153672533-153672534
64251 chrX 153672549 153672549 1 + G C rs781870554 153672547 + 153672527 153672567 41 TGTCGCTGTCGCCGCCGCCGCCGCCCGCCGCCGCCGCCGCC TGTCGCTGTCGCCGCCGCCGCCCCCCGCCGCCGCCGCCGCC < 41bp 1 0.458042998687517 1 0.190848410129547 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM50A ENSG00000071859 UTR5 Human protein_coding chrX:153672547 chrX:153672549 . . 0 23 hm5C_associated_SNPs_15072 0 0 10 DDX3X POSTAR2 ENCODE chrX:153672494-153672562
64251 chrX 153672558 153672558 1 + C G rs782189682 153672547 + 153672527 153672567 41 TGTCGCTGTCGCCGCCGCCGCCGCCCGCCGCCGCCGCCGCC TGTCGCTGTCGCCGCCGCCGCCGCCCGCCGCGGCCGCCGCC < 41bp 1 0.585509534163391 1 0.588287353515625 experiment 0.828980931673219 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM50A ENSG00000071859 UTR5 Human protein_coding chrX:153672547 chrX:153672558 . . 0 32 hm5C_associated_SNPs_15073 0 0 8 DDX3X POSTAR2 ENCODE chrX:153672494-153672562
64251 chrX 153678852 153678852 1 + G C rs192598713 153678864 + 153678844 153678884 41 GGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACG GGACTCCACGCACCCGCTCCCCTGCGACCATGCCAGGCACG < 41bp 1 0.398342207602665 1 0.521174848079681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM50A ENSG00000071859 UTR3 Human protein_coding chrX:153678864 chrX:153678852 . . 0 9 hm5C_associated_SNPs_15074 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678782-153678971
64251 chrX 153678858 153678858 1 + C T rs782244383 153678864 + 153678844 153678884 41 GGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACG GGACTCCAGGCACCTGCTCCCCTGCGACCATGCCAGGCACG < 41bp 1 0.454697012477006 1 0.464275121688843 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM50A ENSG00000071859 UTR3 Human protein_coding chrX:153678864 chrX:153678858 . . 0 15 hm5C_associated_SNPs_15075 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678782-153678971
64251 chrX 153678868 153678868 1 + C T rs183312820 153678864 + 153678844 153678884 41 GGACTCCAGGCACCCGCTCCCCTGCGACCATGCCAGGCACG GGACTCCAGGCACCCGCTCCCCTGTGACCATGCCAGGCACG < 41bp 1 0.54947113315893 1 0.27182948589325 experiment 0.901057733682141 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM50A ENSG00000071859 UTR3 Human protein_coding chrX:153678864 chrX:153678868 . . 0 25 hm5C_associated_SNPs_15076 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678782-153678971
64251 chrX 154005148 154005148 1 + G A rs1800533 154005135 + 154005115 154005155 41 AAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTG AAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGACCACTTG < 41bp 1 0.623513504554779 1 0.412526071071625 experiment 0.752972990890441 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005135 chrX:154005148 . . 0 34 hm5C_associated_SNPs_15077 1 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chrX 154005239 154005239 1 + A G rs7878787 154005227 + 154005207 154005247 41 TTGTTGCTGAGAGAGTGGAACATAGGTCCTAGACAGGGTGA TTGTTGCTGAGAGAGTGGAACATAGGTCCTAGGCAGGGTGA < 41bp 1 0.491118414067658 1 0.171545952558517 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005227 chrX:154005239 . . 0 33 hm5C_associated_SNPs_15078 0 0 27 TARDBP POSTAR2 DRA001158,DRS012387 chrX:154005119-154005291
64251 chrX 154005239 154005239 1 + A G rs7878787 154005235 + 154005215 154005255 41 GAGAGAGTGGAACATAGGTCCTAGACAGGGTGAAGAGTTCT GAGAGAGTGGAACATAGGTCCTAGGCAGGGTGAAGAGTTCT < 41bp 1 0.681016176767292 1 0.164220988750458 experiment 0.637967646465417 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DKC1 ENSG00000130826 UTR3 Human protein_coding chrX:154005235 chrX:154005239 . . 0 25 hm5C_associated_SNPs_15079 0 0 27 TARDBP POSTAR2 DRA001158,DRS012387 chrX:154005119-154005291
64251 chr13 26923272 26923272 1 + G T ACC 26923264 + 26923244 26923284 41 TCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGT TCTTCAAAAGGTGTTTCTGTCTCATGCTTATAGGAAGGTGT < 41bp 1 0.448725984912422 1 0.300919532775879 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26923264 chr13:26923272 nonsynonymous SNV 0.998 3 29 hm5C_associated_SNPs_15082 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr13:26923249-26923283
64251 chr19 45801154 45801154 1 + G T ACC 45801142 + 45801122 45801162 41 CACTGGCCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCC CACTGGCCCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCC < 41bp 1 0.233984815956625 1 0.0154831409454346 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801142 chr19:45801154 nonsynonymous SNV 0.633 2 33 hm5C_associated_SNPs_15086 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801143 + 45801123 45801163 41 ACTGGCCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCC ACTGGCCCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCC < 41bp 1 0.239641660365016 1 0.132094115018845 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801143 chr19:45801154 nonsynonymous SNV 0.633 2 32 hm5C_associated_SNPs_15087 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801144 + 45801124 45801164 41 CTGGCCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCG CTGGCCCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCG < 41bp 1 0.141421775837247 1 0.0627864897251129 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801144 chr19:45801154 nonsynonymous SNV 0.633 2 31 hm5C_associated_SNPs_15088 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801145 + 45801125 45801165 41 TGGCCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGC TGGCCCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGC < 41bp 1 0.432266578907592 1 0.139462620019913 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801145 chr19:45801154 nonsynonymous SNV 0.633 2 30 hm5C_associated_SNPs_15089 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801148 + 45801128 45801168 41 CCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCC CCCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGCCCC < 41bp 1 0.4484534014679 1 0.220012128353119 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801148 chr19:45801154 nonsynonymous SNV 0.633 2 27 hm5C_associated_SNPs_15090 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801149 + 45801129 45801169 41 CCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCA CCATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGCCCCA < 41bp 1 0.332053697487611 1 0.110713571310043 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801149 chr19:45801154 nonsynonymous SNV 0.633 2 26 hm5C_associated_SNPs_15091 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801150 + 45801130 45801170 41 CATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCAC CATGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGCCCCAC < 41bp 1 0.694170188737574 1 0.138041585683823 experiment 0.611659622524852 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801150 chr19:45801154 nonsynonymous SNV 0.633 2 25 hm5C_associated_SNPs_15092 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801152 + 45801132 45801172 41 TGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCACCA TGAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGCCCCACCA < 41bp 1 0.258848202612495 1 0.220105826854706 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801152 chr19:45801154 nonsynonymous SNV 0.633 2 23 hm5C_associated_SNPs_15093 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801154 45801154 1 + G T ACC 45801153 + 45801133 45801173 41 GAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCACCAC GAGGCTGCACCCCTGCCCGCCTGGCGGCCCCGCCCCACCAC < 41bp 1 0.635263197452245 1 0.761174440383911 experiment 0.72947360509551 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801153 chr19:45801154 nonsynonymous SNV 0.633 2 22 hm5C_associated_SNPs_15094 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 49994074 49994074 1 + C G ACC 49994055 + 49994035 49994075 41 GGTATGCTGCCCCACAAAACCAAGCGAGGCCAGGCCGCTCT GGTATGCTGCCCCACAAAACCAAGCGAGGCCAGGCCGCTGT < 41bp 1 0.793308369787748 1 0.631216168403625 experiment 0.413383260424504 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49994055 chr19:49994074 nonsynonymous SNV 0.987 3 40 hm5C_associated_SNPs_15096 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49994033-49994108
64251 chr5 179195985 179195985 1 + G T ACC 179195992 + 179195972 179196012 41 CCGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCAACAG CCGCTGTAATGAATCAGCATCAGTTGCTTTTGGACCAACAG < 41bp 1 0.0697546943543162 1 0.456250965595245 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAML1 ENSG00000161021 CDS Human protein_coding chr5:179195992 chr5:179195985 nonsynonymous SNV 0.931 3 14 hm5C_associated_SNPs_15103 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:179195980-179196000
64251 chr7 101821789 101821789 1 + T C ACC 101821775 + 101821755 101821795 41 GCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT GCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGCTGAGTT < 41bp 1 0.511861745616643 1 0.881910860538483 experiment 0.976276508766713 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101821775 chr7:101821789 nonsynonymous SNV 0.999 0 35 hm5C_associated_SNPs_15105 0 0 6 BUD13 POSTAR2 ENCODE chr7:101821716-101821894
64251 chr5 68485476 68485476 1 + C G ACC 68485471 + 68485451 68485491 41 CTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCC CTCAACCAGCAATGGAGGAGCAGCCGCAGATGCAAGACGCC < 41bp 1 0.51686309986926 1 0.705702245235443 experiment 0.966273800261481 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPH ENSG00000153044 CDS Human protein_coding chr5:68485471 chr5:68485476 synonymous SNV . 0 26 hm5C_associated_SNPs_15106 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68485459-68485482
64251 chr7 73636002 73636002 1 + G A ACC 73636001 + 73635981 73636021 41 TGGAGTATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA TGGAGTATTACAACTGGGGGCAGTTCTCGAAGCCCCCAGAA < 41bp 1 0.165059183040314 1 0.212604284286499 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636001 chr7:73636002 nonsynonymous SNV 0.023 0 22 hm5C_associated_SNPs_15107 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636002 73636002 1 + G A ACC 73636013 + 73635993 73636033 41 ACTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG ACTGGGGGCAGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG < 41bp 1 0.116622796201118 1 0.128506511449814 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636013 chr7:73636002 nonsynonymous SNV 0.023 0 10 hm5C_associated_SNPs_15108 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636002 73636002 1 + G A ACC 73636014 + 73635994 73636034 41 CTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG CTGGGGGCAGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG < 41bp 1 0.387584569165803 1 0.265425741672516 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636014 chr7:73636002 nonsynonymous SNV 0.023 0 9 hm5C_associated_SNPs_15109 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636002 73636002 1 + G A ACC 73636015 + 73635995 73636035 41 TGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA TGGGGGCAGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA < 41bp 1 0.211519896216554 1 0.196709543466568 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636015 chr7:73636002 nonsynonymous SNV 0.023 0 8 hm5C_associated_SNPs_15110 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636002 73636002 1 + G A ACC 73636016 + 73635996 73636036 41 GGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC GGGGGCAGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC < 41bp 1 0.519735450539891 1 0.44497475028038 experiment 0.960529098920218 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636016 chr7:73636002 nonsynonymous SNV 0.023 0 7 hm5C_associated_SNPs_15111 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636002 73636002 1 + G A ACC 73636017 + 73635997 73636037 41 GGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA GGGGCAGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA < 41bp 1 0.653594655349166 1 0.888792872428894 experiment 0.692810689301668 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636017 chr7:73636002 nonsynonymous SNV 0.023 0 6 hm5C_associated_SNPs_15112 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chrX 49093667 49093667 1 + T A ACC 49093654 + 49093634 49093674 41 GATCAACCCTGCGGTGGGCTCTGGCCTCAGCCCTCTGCTGC GATCAACCCTGCGGTGGGCTCTGGCCTCAGCCCACTGCTGC < 41bp 1 0.785848107997862 1 0.516132950782776 experiment 0.428303784004277 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093654 chrX:49093667 synonymous SNV . 0 34 hm5C_associated_SNPs_15113 0 0 1 METAP2 POSTAR2 ENCODE chrX:49093611-49093677
64251 chr2 234354288 234354288 1 + C T ACC 234354284 + 234354264 234354304 41 CTTAGTGTCAGCTGGGAGTGCTGCCGCTCGGCACAGGGAAC CTTAGTGTCAGCTGGGAGTGCTGCTGCTCGGCACAGGGAAC < 41bp 1 0.358040722323905 1 0.379675328731537 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKD ENSG00000077044 CDS Human protein_coding chr2:234354284 chr2:234354288 nonsynonymous SNV 0.394 4 25 hm5C_associated_SNPs_15114 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:234354266-234354291
64251 chr6 29910607 29910607 1 + G C ACC 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGGAGCCCCGCTTCATCGCCGTCGGCTACGTGGACGACAC < 41bp 1 0.505995245797462 1 0.391000688076019 experiment 0.988009508405076 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910607 synonymous SNV . 0 24 hm5C_associated_SNPs_15115 0 0 1 SND1 POSTAR2 ENCODE chr6:29910557-29910608
64251 chr14 75359678 75359678 1 + C A ACC 75359687 + 75359667 75359707 41 ACAGCCTCCTTCTGGCAAACCTGGTAGGCTTCCAACTCCCA ACAGCCTCCTTATGGCAAACCTGGTAGGCTTCCAACTCCCA < 41bp 1 0.675063434511743 1 0.0473174154758453 experiment 0.649873130976513 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359687 chr14:75359678 nonsynonymous SNV 0.242 1 12 hm5C_associated_SNPs_15116 0 0 3 BUD13 POSTAR2 ENCODE chr14:75359641-75359704
64251 chr19 42410903 42410903 1 + G T ACC 42410885 + 42410865 42410905 41 AGGAATTTTGCCGCCTGAGACCCCTCCTGTCTCAGCTTGGG AGGAATTTTGCCGCCTGAGACCCCTCCTGTCTCAGCTTTGG < 41bp 1 0.153892038411056 1 0.0369838774204254 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42410885 chr19:42410903 nonsynonymous SNV 0.964 2 39 hm5C_associated_SNPs_15117 0 0 12 BUD13 POSTAR2 ENCODE chr19:42410871-42410903
64251 chr1 36026523 36026523 1 + C A ACC 36026504 + 36026484 36026524 41 GCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCT GCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGAT < 41bp 1 0.225538551243145 1 0.0798792243003845 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026504 chr1:36026523 stopgain 0.985 1 40 hm5C_associated_SNPs_15118 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr1 36026523 36026523 1 + C A ACC 36026508 + 36026488 36026528 41 CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCTACCG CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGATACCG < 41bp 1 0.169340196349187 1 0.42683082818985 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026508 chr1:36026523 stopgain 0.985 1 36 hm5C_associated_SNPs_15119 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr11 14865507 14865507 1 + G T ACC 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTTCCA < 41bp 1 0.412207910845796 1 0.86513876914978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865507 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_15120 0 0 2 GRWD1 POSTAR2 ENCODE chr11:14865417-14865522
64251 chr5 142264925 142264925 1 + G T ACC 142264910 + 142264890 142264930 41 ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTT ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTTAATTT < 41bp 1 0.0965325057163548 1 0.382794857025146 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142264910 chr5:142264925 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_15121 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:142264918-142264939
64251 chr14 24901482 24901482 1 + C A ACC 24901497 + 24901477 24901517 41 AGTCCCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGGG AGTCCAGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGGG < 41bp 1 0.767264220209677 1 0.948925375938416 experiment 0.465471559580646 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout KHNYN ENSG00000100441 CDS Human protein_coding chr14:24901497 chr14:24901482 synonymous SNV . 0 6 hm5C_associated_SNPs_15122 0 0 3 DDX24 POSTAR2 ENCODE chr14:24901412-24901498
64251 chr6 42957364 42957364 1 + G T ACC 42957366 + 42957346 42957386 41 CAGGAGCCCCCCAAGGTTGCCAAATGCACAGCCAAGCCTAG CAGGAGCCCCCCAAGGTTTCCAAATGCACAGCCAAGCCTAG < 41bp 1 0.25475966155567 1 0.785374283790588 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42957366 chr6:42957364 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_15123 0 0 1 SF3B4 POSTAR2 ENCODE chr6:42957298-42957377
64251 chr4 183696223 183696223 1 + G T ACC 183696207 + 183696187 183696227 41 CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCGAGAA CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCTAGAA < 41bp 1 0.343308844197145 1 0.132273942232132 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183696207 chr4:183696223 stopgain 0.941 0 37 hm5C_associated_SNPs_15124 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr4:183696220-183696240
64251 chr6 151647016 151647016 1 + C A ACC 151647007 + 151646987 151647027 41 ACTTAAAATATGCTGGGGACCATCACCATCACAGGTAAGGC ACTTAAAATATGCTGGGGACCATCACCATAACAGGTAAGGC < 41bp 1 0.155934729927981 1 0.145742744207382 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151647007 chr6:151647016 synonymous SNV . 0 30 hm5C_associated_SNPs_15125 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:151646984-151647016
64251 chr16 31121421 31121421 1 + C A ACC 31121439 + 31121419 31121459 41 TTCCAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTGGGCC TTACAGAAGCTGACAGACTTCCCTCCGGTGAGTGCTGGGCC < 41bp 1 0.0953749123812944 1 0.106821596622467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121439 chr16:31121421 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_15126 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31121417-31121445
64251 chr2 223782837 223782837 1 + C T ACC 223782831 + 223782811 223782851 41 TTAAATGAAACAGAGGTGACCAACATCATTACTAGTAAAGA TTAAATGAAACAGAGGTGACCAACATTATTACTAGTAAAGA < 41bp 1 0.551355296312331 1 0.213681608438492 experiment 0.897289407375338 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACSL3 ENSG00000123983 CDS Human protein_coding chr2:223782831 chr2:223782837 synonymous SNV . 0 27 hm5C_associated_SNPs_15128 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:223782809-223782862
64251 chr19 11472132 11472132 1 + G T ACC 11472113 + 11472093 11472133 41 GTGGCCGCCGCGCGCCGCGCCTTCCCCTGCAAGGATGCGGC GTGGCCGCCGCGCGCCGCGCCTTCCCCTGCAAGGATGCGTC < 41bp 1 0.136406245125807 1 0.342728018760681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11472113 chr19:11472132 nonsynonymous SNV 0.989 1 40 hm5C_associated_SNPs_15129 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:11472126-11472162
64251 chr17 79080645 79080645 1 + G A ACC 79080643 + 79080623 79080663 41 CGCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCT CGCCGCCTCCCGGGCCTTCCCCACCCAGACGGCCAGCGGCT < 41bp 1 0.298467449402257 1 0.0911566019058228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080643 chr17:79080645 nonsynonymous SNV 0.383 0 23 hm5C_associated_SNPs_15130 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr17 79080645 79080645 1 + G A ACC 79080644 + 79080624 79080664 41 GCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCTT GCCGCCTCCCGGGCCTTCCCCACCCAGACGGCCAGCGGCTT < 41bp 1 0.5202581171652 1 0.0676816999912262 experiment 0.9594837656696 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080644 chr17:79080645 nonsynonymous SNV 0.383 0 22 hm5C_associated_SNPs_15131 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr5 71495181 71495181 1 + C A ACC 71495192 + 71495172 71495212 41 GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAACC GTGGCCACAAACTTGGGGACCCCAGCTACTCTTATGAAACC < 41bp 1 0.0856994649026919 1 0.12407848238945 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495192 chr5:71495181 nonsynonymous SNV 0.996 1 10 hm5C_associated_SNPs_15132 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71495175-71495195
64251 chr6 27101075 27101075 1 + G C ACC 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCGACAACAACAAGACCC < 41bp 1 0.357431722166705 1 0.283383160829544 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101075 nonsynonymous SNV 0.999 2 34 hm5C_associated_SNPs_15133 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101075 27101075 1 + G C ACC 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGACAACAACAAGACCCG < 41bp 1 0.419576527127172 1 0.200440645217896 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101075 nonsynonymous SNV 0.999 2 33 hm5C_associated_SNPs_15134 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr5 73981246 73981246 1 + C T ACC 73981245 + 73981225 73981265 41 GCGTCTCGGCCAAGCCGGGGCCGGCGCTGTGGCCCCTGCCG GCGTCTCGGCCAAGCCGGGGCTGGCGCTGTGGCCCCTGCCG < 41bp 1 0.769699540669057 1 0.449321389198303 experiment 0.460600918661886 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981245 chr5:73981246 nonsynonymous SNV 0.070 1 22 hm5C_associated_SNPs_15135 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:73981244-73981274
64251 chr3 58128391 58128391 1 + C G ACC 58128382 + 58128362 58128402 41 GCCTTCTGTTTTTAGGTGACCGAAGAGGCCTATGTCCCAGT GCCTTCTGTTTTTAGGTGACCGAAGAGGCGTATGTCCCAGT < 41bp 1 0.156497554309558 1 0.843326210975647 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58128382 chr3:58128391 synonymous SNV . 0 30 hm5C_associated_SNPs_15136 0 0 12 EIF3H POSTAR2 ENCODE chr3:58128377-58128394
64251 chr2 70096886 70096886 1 + C T ACC 70096880 + 70096860 70096900 41 CGTTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC CGTTGGACAGGTTTTAACTTCGGCTTTGACCTACTTGTAAC < 41bp 1 0.641206149005761 1 0.290747761726379 experiment 0.717587701988478 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096880 chr2:70096886 synonymous SNV . 0 27 hm5C_associated_SNPs_15137 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:70096870-70096895
64251 chrX 53112257 53112257 1 + C T ACC 53112248 + 53112228 53112268 41 TGAGGAGCAGCAGGAGGCGGCGGCGGCGGCGGAGGAGGAAG TGAGGAGCAGCAGGAGGCGGCGGCGGCGGTGGAGGAGGAAG < 41bp 1 0.763783569425158 1 0.825408697128296 experiment 0.472432861149685 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53112248 chrX:53112257 nonsynonymous SNV 0.613 2 30 hm5C_associated_SNPs_15138 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chrX:53112257-53112278
64251 chrX 53112257 53112257 1 + C T ACC 53112254 + 53112234 53112274 41 GCAGCAGGAGGCGGCGGCGGCGGCGGAGGAGGAAGCAGAGG GCAGCAGGAGGCGGCGGCGGCGGTGGAGGAGGAAGCAGAGG < 41bp 1 0.72494756422117 1 0.849007189273834 experiment 0.55010487155766 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53112254 chrX:53112257 nonsynonymous SNV 0.613 2 24 hm5C_associated_SNPs_15139 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chrX:53112257-53112278
64251 chr6 80406276 80406276 1 + A G ACC 80406278 + 80406258 80406298 41 CCTGAAACCACGGTTGGCATCAAAGGTAGGTAAATCTTTTC CCTGAAACCACGGTTGGCGTCAAAGGTAGGTAAATCTTTTC < 41bp 1 0.539749371826415 1 0.733031272888184 experiment 0.92050125634717 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SH3BGRL2 ENSG00000198478 CDS Human protein_coding chr6:80406278 chr6:80406276 synonymous SNV . 0 19 hm5C_associated_SNPs_15141 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:80406261-80406286
64251 chr21 46900432 46900432 1 + C T ACC 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGTGGGT < 41bp 1 0.0322796783188585 1 0.169211447238922 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900432 nonsynonymous SNV 0.161 3 37 hm5C_associated_SNPs_15149 0 0 7 FMR1 POSTAR2 ENCODE chr21:46900396-46900434
64251 chr9 71861604 71861604 1 + A G ACC 71861613 + 71861593 71861633 41 TATATTTCTATAGCTACAATCAACCTAAATTCAGCCAATGA TATATTTCTATGGCTACAATCAACCTAAATTCAGCCAATGA < 41bp 1 0.0929977698574326 1 0.697188675403595 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TJP2 ENSG00000119139 splicing Human protein_coding chr9:71861613 chr9:71861604 . 0.866 0 12 hm5C_associated_SNPs_15150 0 0 2 SF3B1 POSTAR2 ENCODE chr9:71861597-71861604
64251 chr12 123465730 123465730 1 + G T ACC 123465748 + 123465728 123465768 41 CCGGTCCCGGGGACGGGGGTCGGAAAAGAGAAAGAAGAAGA CCTGTCCCGGGGACGGGGGTCGGAAAAGAGAAAGAAGAAGA < 41bp 1 0.736946876150315 1 0.742080450057983 experiment 0.52610624769937 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123465748 chr12:123465730 nonsynonymous SNV 0.999 2 3 hm5C_associated_SNPs_15151 0 0 14 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr12:123465720-123465740
64251 chr5 149758877 149758877 1 + C G ACC 149758892 + 149758872 149758912 41 CGTGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGG CGTGGGTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGG < 41bp 1 0.0956980733823551 1 0.116784632205963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758892 chr5:149758877 nonsynonymous SNV 0.009 2 6 hm5C_associated_SNPs_15152 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:149758852-149758890
64251 chr5 149758877 149758877 1 + C G ACC 149758893 + 149758873 149758913 41 GTGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGA GTGGGTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGA < 41bp 1 0.242685768113834 1 0.262529462575912 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758893 chr5:149758877 nonsynonymous SNV 0.009 2 5 hm5C_associated_SNPs_15153 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:149758852-149758890
64251 chr5 149758877 149758877 1 + C G ACC 149758894 + 149758874 149758914 41 TGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGAC TGGGTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGAC < 41bp 1 0.133270351299319 1 0.188710004091263 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758894 chr5:149758877 nonsynonymous SNV 0.009 2 4 hm5C_associated_SNPs_15154 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:149758852-149758890
64251 chr17 16285604 16285604 1 + A G ACC 16285613 + 16285593 16285633 41 GCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATCC GCAGCTGGAAGGTGGCCGCACTCTTTCTGACTACAACATCC < 41bp 1 0.39581405999906 1 0.111688047647476 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285613 chr17:16285604 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_15155 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:16285600-16285620
64251 chr19 41758838 41758838 1 + T C ACC 41758850 + 41758830 41758870 41 ACACAGCTTCCTCCTCTATTCCCGGCTCGGGGACCAGCCAG ACACAGCTCCCTCCTCTATTCCCGGCTCGGGGACCAGCCAG < 41bp 1 0.60935109854068 1 0.23870462179184 experiment 0.781297802918639 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AXL ENSG00000167601 CDS Human protein_coding chr19:41758850 chr19:41758838 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_15157 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr19:41758818-41758839
64251 chr19 41758838 41758838 1 + T C ACC 41758851 + 41758831 41758871 41 CACAGCTTCCTCCTCTATTCCCGGCTCGGGGACCAGCCAGT CACAGCTCCCTCCTCTATTCCCGGCTCGGGGACCAGCCAGT < 41bp 1 0.164861476037545 1 0.135707557201385 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AXL ENSG00000167601 CDS Human protein_coding chr19:41758851 chr19:41758838 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_15158 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr19:41758818-41758839
64251 chr12 57560791 57560791 1 + A G ACC 57560805 + 57560785 57560825 41 TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTCG TGGATGGCGACTGTGGGGACCGCTCTGATGAGTCTGCTTCG < 41bp 1 0.0529728109430925 1 0.214202344417572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57560805 chr12:57560791 nonsynonymous SNV 0.969 4 7 hm5C_associated_SNPs_15159 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:57560780-57560800
64251 chr1 154962713 154962713 1 + T A ACC 154962708 + 154962688 154962728 41 CCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC CCCCTTTCCCTGAGCTGGAACAGTTACTACAGGACACTATC < 41bp 1 0.234786025711314 1 0.257856547832489 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962708 chr1:154962713 nonsynonymous SNV 0.990 4 26 hm5C_associated_SNPs_15160 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:154962692-154962716
64251 chr10 103900009 103900009 1 + G A ACC 103900017 + 103899997 103900037 41 GACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGA GACTCTGCCCAAACCAGCCCCATGCCAGTTGACTCTGTTGA < 41bp 1 0.0645868874186774 1 0.285590350627899 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900017 chr10:103900009 nonsynonymous SNV 0.002 1 13 hm5C_associated_SNPs_15161 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr10:103899913-103900019
64251 chr1 63282309 63282309 1 + A T ACC 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CGGGATGTACAATAGAGGATCACGTAATTGCAGGAATTGTA < 41bp 1 0.441340967800949 1 0.141036182641983 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282309 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_15162 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr16 1793368 1793368 1 + C A ACC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGAACGTGTTCCACCTGGCTGACGGCACGGTACG < 41bp 1 0.176553905713457 1 0.0508491098880768 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793368 nonsynonymous SNV 0.689 2 20 hm5C_associated_SNPs_15168 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr16:1793360-1793380
64251 chr17 30535210 30535210 1 + T C ACC 30535224 + 30535204 30535244 41 AGTATTTCACCTACTGATTTCTGCAGGAAACACAAAATGCC AGTATTCCACCTACTGATTTCTGCAGGAAACACAAAATGCC < 41bp 1 0.759685936765197 1 0.762610197067261 experiment 0.480628126469606 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30535224 chr17:30535210 nonsynonymous SNV 0.993 0 7 hm5C_associated_SNPs_15169 0 0 2 YBX3 POSTAR2 ENCODE chr17:30535178-30535235
64251 chr1 161173239 161173239 1 + G T ACC 161173246 + 161173226 161173266 41 GAGGTGTTCGGCAGTGGCAGCCAGATGTGGAATGGGCACAG GAGGTGTTCGGCATTGGCAGCCAGATGTGGAATGGGCACAG < 41bp 1 0.649166509553446 1 0.67762553691864 experiment 0.701666980893109 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161173246 chr1:161173239 nonsynonymous SNV 0.997 2 14 hm5C_associated_SNPs_15170 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:161173223-161173249
64251 chr14 102476260 102476260 1 + C T ACC 102476275 + 102476255 102476295 41 TGAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC TGAACTCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC < 41bp 1 0.0449494962358117 1 0.345853865146637 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102476275 chr14:102476260 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_15171 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102476193-102476327
64251 chr15 42059314 42059314 1 + C T ACC 42059304 + 42059284 42059324 41 GATGCAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGC GATGCAGATGGTCAGAGTCTCAAGGTGATGTCTTGTTTGGC < 41bp 1 0.398559110943431 1 0.692205965518951 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059304 chr15:42059314 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_15172 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:42059280-42059314
64251 chr16 2564109 2564109 1 + C G ACC 2564089 + 2564069 2564109 41 CGGCCCGCAGAGCTTGCCCCCTCCCCACCCGCAGACATGTC CGGCCCGCAGAGCTTGCCCCCTCCCCACCCGCAGACATGTG < 41bp 1 0.367794190126551 1 0.296096742153168 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP6V0C ENSG00000185883;ENSG00000259784 CDS Human other chr16:2564089 chr16:2564109 nonsynonymous SNV 0.234 0 41 hm5C_associated_SNPs_15173 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:2564063-2564119
64251 chr12 112590550 112590550 1 + C G ACC 112590564 + 112590544 112590584 41 GCCTTCCAAGCAACAGGGAGCTGGGGATGCAGAAGAGGAAG GCCTTCGAAGCAACAGGGAGCTGGGGATGCAGAAGAGGAAG < 41bp 1 0.702721238924643 1 0.468556582927704 experiment 0.594557522150714 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112590564 chr12:112590550 synonymous SNV . 0 7 hm5C_associated_SNPs_15174 0 0 1 PUS1 POSTAR2 ENCODE chr12:112590547-112590555
64251 chr6 30691786 30691786 1 + T A ACC 30691780 + 30691760 30691800 41 CGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGGA CGGCCGATACCTCACCGTGGCTGCTGACTTCCGTGGTCGGA < 41bp 1 0.344505437661722 1 0.110723346471786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691780 chr6:30691786 nonsynonymous SNV 0.998 2 27 hm5C_associated_SNPs_15175 0 0 57 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr6 30691786 30691786 1 + T A ACC 30691787 + 30691767 30691807 41 TACCTCACCGTGGCTGCTGTCTTCCGTGGTCGGATGTCCAT TACCTCACCGTGGCTGCTGACTTCCGTGGTCGGATGTCCAT < 41bp 1 0.223695064413749 1 0.0214992761611938 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691787 chr6:30691786 nonsynonymous SNV 0.998 2 20 hm5C_associated_SNPs_15176 0 0 57 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr6 30691786 30691786 1 + T A ACC 30691797 + 30691777 30691817 41 TGGCTGCTGTCTTCCGTGGTCGGATGTCCATGAAGGAGGTC TGGCTGCTGACTTCCGTGGTCGGATGTCCATGAAGGAGGTC < 41bp 1 0.424764455822485 1 0.548498213291168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691797 chr6:30691786 nonsynonymous SNV 0.998 2 10 hm5C_associated_SNPs_15177 0 0 57 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr5 912038 912038 1 + A G ACC 912029 + 912009 912049 41 CGTGGCCTTCGTGGACAGGGCTGACATCAAGCAGTACATTG CGTGGCCTTCGTGGACAGGGCTGACATCAGGCAGTACATTG < 41bp 1 0.362727003015796 1 0.0315431952476501 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:912029 chr5:912038 nonsynonymous SNV 0.986 1 30 hm5C_associated_SNPs_15179 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:912019-912038
64251 chr3 33877676 33877676 1 + C T ACC 33877665 + 33877645 33877685 41 ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT ATGACTTCATTTATCATGATCGAGTTCCAGATCTTAAAGAT < 41bp 1 0.471121473263363 1 0.246382355690002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877665 chr3:33877676 synonymous SNV . 0 32 hm5C_associated_SNPs_15180 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33877640-33877700
64251 chr12 56622965 56622965 1 + G A ACC 56622945 + 56622925 56622965 41 TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACA < 41bp 1 0.235538045564348 1 0.410408705472946 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622945 chr12:56622965 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_15183 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr12:56622905-56622971
64251 chr2 36739479 36739479 1 + G T ACC 36739473 + 36739453 36739493 41 AAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGG AAATGTCCAGAGCTCTCATGCAGTAATATCTGCCCCTTGGG < 41bp 1 0.495100118808948 1 0.325673162937164 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36739473 chr2:36739479 nonsynonymous SNV 0.992 4 27 hm5C_associated_SNPs_15184 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:36739453-36739479
64251 chr3 37336491 37336491 1 + G T ACC 37336473 + 37336453 37336493 41 ATCATTTTATGTTTTAGGAGCTCCAAATGGACCAGCAGGCA ATCATTTTATGTTTTAGGAGCTCCAAATGGACCAGCAGTCA < 41bp 1 0.310467204434672 1 0.525657773017883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37336473 chr3:37336491 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_15185 0 0 9 GRWD1 POSTAR2 ENCODE chr3:37336469-37336510
64251 chr7 40085455 40085455 1 + G A ACC 40085473 + 40085453 40085493 41 TTGAATATATGGACCATGATCTGATGGGACTACTGGAATCA TTAAATATATGGACCATGATCTGATGGGACTACTGGAATCA < 41bp 1 0.246715493040797 1 0.114367127418518 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDK13 ENSG00000065883 CDS Human protein_coding chr7:40085473 chr7:40085455 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_15186 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:40085440-40085460
64251 chr12 6639952 6639952 1 + G A ACC 6639957 + 6639937 6639977 41 CCAAGCAGGTAGCCAGAGAGCGCCATCAGCCAAGAAACCAT CCAAGCAGGTAGCCAAAGAGCGCCATCAGCCAAGAAACCAT < 41bp 1 0.773765895054113 1 0.335585355758667 experiment 0.452468209891774 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6639957 chr12:6639952 synonymous SNV . 0 16 hm5C_associated_SNPs_15187 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6639862-6639955
64251 chr7 150771214 150771214 1 + G C ACC 150771233 + 150771213 150771253 41 AGACCCACGCTGGGGCCGGGCAACAGGAGCTTGGCTGGGCA ACACCCACGCTGGGGCCGGGCAACAGGAGCTTGGCTGGGCA < 41bp 1 0.646131003798431 1 0.503123164176941 experiment 0.707737992403138 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771233 chr7:150771214 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_15188 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:150771214-150771215
64251 chr1 114483599 114483599 1 + G T ACC 114483597 + 114483577 114483617 41 AAGTCTTGGAGTTCCTAGGCCGGGGGACATTTGGACAGGTG AAGTCTTGGAGTTCCTAGGCCGTGGGACATTTGGACAGGTG < 41bp 1 0.386562288142393 1 0.388086229562759 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483597 chr1:114483599 synonymous SNV . 0 23 hm5C_associated_SNPs_15189 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483580-114483600
64251 chr1 114483599 114483599 1 + G T ACC 114483612 + 114483592 114483632 41 TAGGCCGGGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG TAGGCCGTGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG < 41bp 1 0.636251917765319 1 0.492979496717453 experiment 0.727496164469362 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483612 chr1:114483599 synonymous SNV . 0 8 hm5C_associated_SNPs_15190 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483580-114483600
64251 chr12 57559628 57559628 1 + C T ACC 57559624 + 57559604 57559644 41 GCCTCCACCCCAGTGCCAGCCAGGCGAGTTTGCCTGTGCCA GCCTCCACCCCAGTGCCAGCCAGGTGAGTTTGCCTGTGCCA < 41bp 1 0.220262525249799 1 0.912267208099365 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57559624 chr12:57559628 synonymous SNV . 0 25 hm5C_associated_SNPs_15192 0 0 1 RPS3 POSTAR2 ENCODE chr12:57559625-57559677
64251 chr10 45484790 45484790 1 + G A ACC 45484778 + 45484758 45484798 41 AATGTGAGGGTCAACAGCACCATGACAACCCTGCAGGTGCT AATGTGAGGGTCAACAGCACCATGACAACCCTACAGGTGCT < 41bp 1 0.553379701472796 1 0.479165613651276 experiment 0.893240597054409 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45484778 chr10:45484790 synonymous SNV . 0 33 hm5C_associated_SNPs_15196 0 0 4 GRWD1 POSTAR2 ENCODE chr10:45484724-45484809
64251 chr19 4409751 4409751 1 + C T ACC 4409753 + 4409733 4409773 41 CCCACCTCCACGCCCCTCCGCAGAGTGAGTATCTCCCATGG CCCACCTCCACGCCCCTCTGCAGAGTGAGTATCTCCCATGG < 41bp 1 0.506072323386357 1 0.81281054019928 experiment 0.987855353227287 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409753 chr19:4409751 nonsynonymous SNV 0.097 0 19 hm5C_associated_SNPs_15197 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:4409719-4409752
64251 chr9 130164929 130164929 1 + G A ACC 130164924 + 130164904 130164944 41 ATGTGCTTCATGCCCGAGACCCCGCGCTTCCTGCTGACTCA ATGTGCTTCATGCCCGAGACCCCGCACTTCCTGCTGACTCA < 41bp 1 0.223669218954456 1 0.0918110013008118 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A8 ENSG00000136856 CDS Human protein_coding chr9:130164924 chr9:130164929 nonsynonymous SNV 0.987 3 26 hm5C_associated_SNPs_15198 0 0 1 SND1 POSTAR2 ENCODE chr9:130164899-130164958
64251 chr5 172315747 172315747 1 + G A ACC 172315759 + 172315739 172315779 41 CAGCCAACGTACACCGGGGCCATTAGTGAGTAGCCAACCTC CAGCCAACATACACCGGGGCCATTAGTGAGTAGCCAACCTC < 41bp 1 0.132998882898577 1 0.0603305399417877 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172315759 chr5:172315747 synonymous SNV . 0 9 hm5C_associated_SNPs_15218 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:172315720-172315748
64251 chr9 100079354 100079354 1 + A C ACC 100079373 + 100079353 100079393 41 AACTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT ACCTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT < 41bp 1 0.724589660599808 1 0.594037592411041 experiment 0.550820678800385 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100079373 chr9:100079354 nonsynonymous SNV 0.985 3 2 hm5C_associated_SNPs_15219 0 0 2 UCHL5 POSTAR2 ENCODE chr9:100079345-100079394
64251 chr19 38780794 38780794 1 + C T ACC 38780801 + 38780781 38780821 41 CACTGGGCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTG CACTGGGCCTTGCTGTGCATCCTTCCCACGCTGGTACTTTG < 41bp 1 0.0142921336865057 1 0.083954930305481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780801 chr19:38780794 nonsynonymous SNV 0.697 4 14 hm5C_associated_SNPs_15220 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chrX 153669455 153669455 1 + C A ACC 153669437 + 153669417 153669457 41 CTTCACCGGAGCTGCTCTCACCACAGATTGAGTGCCATCTA CTTCACCGGAGCTGCTCTCACCACAGATTGAGTGCCATATA < 41bp 1 0.723586049147844 1 0.507371068000793 experiment 0.552827901704312 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669437 chrX:153669455 synonymous SNV . 0 39 hm5C_associated_SNPs_15221 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:153669446-153669467
64251 chr6 7393387 7393387 1 + C T ACC 7393371 + 7393351 7393391 41 ACAGTCAAAGAGAAGGATGACATTCTGTTTGAAGACCTTCA ACAGTCAAAGAGAAGGATGACATTCTGTTTGAAGACTTTCA < 41bp 1 0.0683799153216622 1 0.0457217991352081 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7393371 chr6:7393387 nonsynonymous SNV 0.024 0 37 hm5C_associated_SNPs_15222 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:7393377-7393401
64251 chr7 99701292 99701292 1 + G A ACC 99701304 + 99701284 99701324 41 GCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGGTGAGGGAA GCCGCCCCATCCTGTCCAGTCGCTCTGACCAGGTGAGGGAA < 41bp 1 0.397398693898614 1 0.286275714635849 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99701304 chr7:99701292 nonsynonymous SNV 0.975 1 9 hm5C_associated_SNPs_15223 0 0 1 DDX24 POSTAR2 ENCODE chr7:99701234-99701300
64251 chr3 9854684 9854684 1 + C T BLCA 9854668 + 9854648 9854688 41 CAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAG CAAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCTGGAG < 41bp 1 0.413516553498184 1 0.749848008155823 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9854668 chr3:9854684 nonsynonymous SNV 0.864 1 37 hm5C_associated_SNPs_15225 0 0 11 DICER1 POSTAR2 GSE55333,GSM1334288 chr3:9854670-9854688
64251 chr7 44098978 44098978 1 + G C BLCA 44098968 + 44098948 44098988 41 TGCAGGCAAGCTGAGGAGCCCCTTCCTGCAGAAGCAGCTCA TGCAGGCAAGCTGAGGAGCCCCTTCCTGCACAAGCAGCTCA < 41bp 1 0.020922217680845 1 0.0257122218608856 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44098968 chr7:44098978 nonsynonymous SNV 0.999 2 31 hm5C_associated_SNPs_15226 0 0 2 BUD13 POSTAR2 ENCODE chr7:44098947-44098991
64251 chr17 30325880 30325880 1 + C T BLCA 30325888 + 30325868 30325908 41 AAAAGGGGGAATCTGCTTCCCCTGCAAACGAAGAAATAACT AAAAGGGGGAATTTGCTTCCCCTGCAAACGAAGAAATAACT < 41bp 1 0.0621106777693345 1 0.292006433010101 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30325888 chr17:30325880 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_15227 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:30325849-30325882
64251 chr8 25181401 25181401 1 + C T BLCA 25181381 + 25181361 25181401 41 CAGCCAGAGATAAATCGGAGCGAGCATTTGGGGTGGCCTTC CAGCCAGAGATAAATCGGAGCGAGCATTTGGGGTGGCCTTT < 41bp 1 0.149341170759757 1 0.362023800611496 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25181381 chr8:25181401 synonymous SNV . 0 41 hm5C_associated_SNPs_15228 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr8:25181381-25181402
64251 chr1 180794031 180794031 1 + C T BLCA 180794028 + 180794008 180794048 41 GCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCCGAG GCTGGAGTAAACCATGTACTCATTTTTGAACTTAATCCGAG < 41bp 1 0.193331097317247 1 0.369758248329163 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180794028 chr1:180794031 synonymous SNV . 0 24 hm5C_associated_SNPs_15229 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:180794021-180794056
64251 chr1 150280534 150280534 1 + G T BLCA 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATTAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.68063651598352 1 0.747945666313171 experiment 0.63872696803296 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280534 stopgain 0.999 0 6 hm5C_associated_SNPs_15233 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:150280480-150280540
64251 chr12 56552274 56552274 1 + G C BLCA 56552289 + 56552269 56552309 41 GGGTAGGAGGCAAAGGGAATCTGAGGACCCGAAAGGTTGGA GGGTACGAGGCAAAGGGAATCTGAGGACCCGAAAGGTTGGA < 41bp 1 0.773354462215522 1 0.6302889585495 experiment 0.453291075568955 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYL6 ENSG00000092841 CDS Human protein_coding chr12:56552289 chr12:56552274 nonsynonymous SNV 0.000 1 6 hm5C_associated_SNPs_15234 0 0 22 BUD13 POSTAR2 ENCODE chr12:56552242-56552337
64251 chr19 54377329 54377329 1 + C T BLCA 54377326 + 54377306 54377346 41 CTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTT CTGCTGAAGGTGCTGGAGACCTTTGTTGCCTGCATCATCTT < 41bp 1 0.226168471797586 1 0.271077245473862 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377326 chr19:54377329 synonymous SNV . 0 24 hm5C_associated_SNPs_15235 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:54377297-54377349
64251 chr19 1272166 1272166 1 + C T BLCA 1272179 + 1272159 1272199 41 GTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT GTGCTTGTCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT < 41bp 1 0.134396396672642 1 0.178918033838272 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272179 chr19:1272166 synonymous SNV . 0 8 hm5C_associated_SNPs_15237 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:1272094-1272229
64251 chr19 1272166 1272166 1 + C T BLCA 1272182 + 1272162 1272202 41 CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC CTTGTCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC < 41bp 1 0.332576653366225 1 0.0638211667537689 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272182 chr19:1272166 synonymous SNV . 0 5 hm5C_associated_SNPs_15238 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:1272094-1272229
64251 chr19 1440439 1440439 1 + C T BLCA 1440440 + 1440420 1440460 41 ATCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTA ATCGGGGCCACCCACTCCTTCCGCTTCATCCCTCTCAAGTA < 41bp 1 0.305478133574693 1 0.235934227705002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440440 chr19:1440439 nonsynonymous SNV 0.967 1 20 hm5C_associated_SNPs_15239 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr19 1440439 1440439 1 + C T BLCA 1440441 + 1440421 1440461 41 TCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTAA TCGGGGCCACCCACTCCTTCCGCTTCATCCCTCTCAAGTAA < 41bp 1 0.28797147897483 1 0.440315157175064 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440441 chr19:1440439 nonsynonymous SNV 0.967 1 19 hm5C_associated_SNPs_15240 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr19 11215960 11215960 1 + C T BLCA 11215952 + 11215932 11215972 41 ACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCA ACGATGGGAAGTGCATCTCTCGGCAGTTTGTCTGTGACTCA < 41bp 1 0.788161554433405 1 0.824134707450867 experiment 0.42367689113319 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11215952 chr19:11215960 synonymous SNV . 0 29 hm5C_associated_SNPs_15242 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:11215960-11215980
64251 chr5 140084142 140084142 1 + G A BLCA 140084145 + 140084125 140084165 41 TTGAGGAAAGGATGAAGGAGCTCAGAGAAGAGGTAAGGGTC TTGAGGAAAGGATGAAGAAGCTCAGAGAAGAGGTAAGGGTC < 41bp 1 0.681439146131567 1 0.517048299312592 experiment 0.637121707736867 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084145 chr5:140084142 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_15245 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084142 140084142 1 + G A BLCA 140084147 + 140084127 140084167 41 GAGGAAAGGATGAAGGAGCTCAGAGAAGAGGTAAGGGTCTC GAGGAAAGGATGAAGAAGCTCAGAGAAGAGGTAAGGGTCTC < 41bp 1 0.77021426489137 1 0.535973072052002 experiment 0.45957147021726 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084147 chr5:140084142 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_15246 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr9 106901537 106901537 1 + A G BLCA 106901519 + 106901499 106901539 41 CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGATT CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGGTT < 41bp 1 0.325592888891031 1 0.836594581604004 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106901519 chr9:106901537 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_15247 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:106901524-106901555
64251 chr2 169626102 169626102 1 + C T BLCA 169626121 + 169626101 169626141 41 GCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCT GTGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCT < 41bp 1 0.33879551883205 1 0.15611606836319 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169626121 chr2:169626102 nonsynonymous SNV 0.990 0 2 hm5C_associated_SNPs_15248 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:169626072-169626103
64251 chr17 57057639 57057639 1 + G T BLCA 57057658 + 57057638 57057678 41 AGAACTCTTTTCAAGGAGGGCAAGAAGATGGTGGGGATGAT ATAACTCTTTTCAAGGAGGGCAAGAAGATGGTGGGGATGAT < 41bp 1 0.417317307450904 1 0.409056752920151 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPM1E ENSG00000175175 CDS Human protein_coding chr17:57057658 chr17:57057639 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_15249 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:57057609-57057650
64251 chr17 72239552 72239552 1 + C A BLCA 72239546 + 72239526 72239566 41 CTCCTGCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGC CTCCTGCTCTTTATCCTGGACCTGGTAATCTGCCTCATTGC < 41bp 1 0.159466882109273 1 0.0625333189964294 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72239546 chr17:72239552 synonymous SNV . 0 27 hm5C_associated_SNPs_15251 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:72239533-72239564
64251 chr12 112227677 112227677 1 + A C BLCA 112227678 + 112227658 112227698 41 GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCTACAC GGGAAAACCATCCCCATTGCCGGAGACTTCTTCAGCTACAC < 41bp 1 0.723440938504651 1 0.877638578414917 experiment 0.553118122990698 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227678 chr12:112227677 nonsynonymous SNV 0.835 2 20 hm5C_associated_SNPs_15252 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112227652-112227684
64251 chr22 42033762 42033762 1 + G A BLCA 42033761 + 42033741 42033781 41 AAGACCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAG AAGACCTGTTGCGGAAGGTTCACGCCAAGGAGACCAGGAAG < 41bp 1 0.528265732241161 1 0.478497445583344 experiment 0.943468535517678 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42033761 chr22:42033762 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_15253 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42033720-42033764
64251 chr22 42033762 42033762 1 + G A BLCA 42033765 + 42033745 42033785 41 CCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAG CCTGTTGCGGAAGGTTCACGCCAAGGAGACCAGGAAGCGAG < 41bp 1 0.602618570934505 1 0.356295675039291 experiment 0.794762858130989 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42033765 chr22:42033762 nonsynonymous SNV 0.996 2 18 hm5C_associated_SNPs_15254 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42033720-42033764
64251 chr22 42033762 42033762 1 + G A BLCA 42033766 + 42033746 42033786 41 CTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGC CTGTTGCGGAAGGTTCACGCCAAGGAGACCAGGAAGCGAGC < 41bp 1 0.770453737031373 1 0.797075152397156 experiment 0.459092525937253 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42033766 chr22:42033762 nonsynonymous SNV 0.996 2 17 hm5C_associated_SNPs_15255 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42033720-42033764
64251 chr16 70589054 70589054 1 + G A BLCA 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC AGCAACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC < 41bp 1 0.295239261451154 1 0.154723137617111 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589054 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_15256 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr20 37076748 37076748 1 + C T BLCA 37076732 + 37076712 37076752 41 TTTGCTCTTTTCTGCGCCTGCATTCGTAAGTGATCACGGGC TTTGCTCTTTTCTGCGCCTGCATTCGTAAGTGATCATGGGC < 41bp 1 0.036294397453096 1 0.0378670990467072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA71E ENSG00000174365 ncRNA_exonic Human processed_transcript chr20:37076732 chr20:37076748 . . 0 37 hm5C_associated_SNPs_15258 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr20:37076725-37076750
64251 chr11 58892634 58892634 1 + G A BLCA 58892617 + 58892597 58892637 41 CCCAGGATTAGAAATTATTACTTTTGTAGTTTGCCCCGAAA CCCAGGATTAGAAATTATTACTTTTGTAGTTTGCCCCAAAA < 41bp 1 0.176816708666783 1 0.0848742425441742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM111B ENSG00000189057 CDS Human protein_coding chr11:58892617 chr11:58892634 nonsynonymous SNV 0.007 0 38 hm5C_associated_SNPs_15259 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:58892615-58892644
64251 chr5 33445453 33445453 1 + A C BLCA 33445465 + 33445445 33445485 41 GAGAAGCAAAAGGAAGGAGGCAAAAAGAAGAACAAAGAAGG GAGAAGCACAAGGAAGGAGGCAAAAAGAAGAACAAAGAAGG < 41bp 1 0.505178806567191 1 0.497152715921402 experiment 0.989642386865617 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TARS ENSG00000113407 CDS Human protein_coding chr5:33445465 chr5:33445453 nonsynonymous SNV 0.975 0 9 hm5C_associated_SNPs_15260 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:33445420-33445460
64251 chr11 68363567 68363567 1 + C T BLCA 68363565 + 68363545 68363585 41 TGGGTCTTGTTTTTCCTTAGCTCGGGGAGTACAGACAGTGA TGGGTCTTGTTTTTCCTTAGCTTGGGGAGTACAGACAGTGA < 41bp 1 0.387742341537738 1 0.406933605670929 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363565 chr11:68363567 nonsynonymous SNV 0.938 3 23 hm5C_associated_SNPs_15261 0 0 2 GPKOW POSTAR2 ENCODE chr11:68363549-68363598
64251 chr11 68363567 68363567 1 + C T BLCA 68363576 + 68363556 68363596 41 TTTCCTTAGCTCGGGGAGTACAGACAGTGAGGAAAGTACAG TTTCCTTAGCTTGGGGAGTACAGACAGTGAGGAAAGTACAG < 41bp 1 0.223157016834509 1 0.484497457742691 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363576 chr11:68363567 nonsynonymous SNV 0.938 3 12 hm5C_associated_SNPs_15262 0 0 2 GPKOW POSTAR2 ENCODE chr11:68363549-68363598
64251 chr4 174239626 174239626 1 + G A BLCA 174239643 + 174239623 174239663 41 CCAGTGTTTGACAAAGGGAGCTGATGGATCAAAAGTTATGA CCAATGTTTGACAAAGGGAGCTGATGGATCAAAAGTTATGA < 41bp 1 0.177739650240503 1 0.0751466155052185 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174239643 chr4:174239626 synonymous SNV . 0 4 hm5C_associated_SNPs_15263 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:174239603-174239652
64251 chr21 38853090 38853090 1 + G A BLCA 38853089 + 38853069 38853109 41 GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGG GAAAAGTGGATGGATCGTTACAAAATTGACTCCTTGATAGG < 41bp 1 0.589018839228191 1 0.493883311748505 experiment 0.821962321543619 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853089 chr21:38853090 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_15264 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:38852989-38853112
64251 chr10 105179351 105179351 1 + G T BLCA 105179366 + 105179346 105179386 41 CCCAAGAACTTCTCAGAAATCCATCCTGGAATGCTGCTCAT CCCAATAACTTCTCAGAAATCCATCCTGGAATGCTGCTCAT < 41bp 1 0.0655291428797075 1 0.162154346704483 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105179366 chr10:105179351 nonsynonymous SNV 0.849 3 6 hm5C_associated_SNPs_15265 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:105179331-105179356
64251 chr16 29818106 29818106 1 + G T BLCA 29818116 + 29818096 29818136 41 GCGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCC GCGGCCTCATTAACTCCTTCCCGCCACCTCAGGGTCACGCC < 41bp 1 0.187001844599628 1 0.0827507078647614 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818116 chr16:29818106 nonsynonymous SNV 0.998 0 11 hm5C_associated_SNPs_15266 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:29817940-29818140
64251 chr16 29818106 29818106 1 + G T BLCA 29818117 + 29818097 29818137 41 CGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCCC CGGCCTCATTAACTCCTTCCCGCCACCTCAGGGTCACGCCC < 41bp 1 0.768402844407939 1 0.867076337337494 experiment 0.463194311184122 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818117 chr16:29818106 nonsynonymous SNV 0.998 0 10 hm5C_associated_SNPs_15267 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:29817940-29818140
64251 chr1 116942124 116942124 1 + T G BLCA 116942108 + 116942088 116942128 41 TGAAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTG TGAAGAGACAGCCCAGAAATCCCAAAACAGACAAACGTGTG < 41bp 1 0.452551151596438 1 0.433295667171478 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942108 chr1:116942124 nonsynonymous SNV 0.988 5 37 hm5C_associated_SNPs_15268 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr1 116942124 116942124 1 + T G BLCA 116942109 + 116942089 116942129 41 GAAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTGA GAAGAGACAGCCCAGAAATCCCAAAACAGACAAACGTGTGA < 41bp 1 0.221022915112388 1 0.349892318248749 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942109 chr1:116942124 nonsynonymous SNV 0.988 5 36 hm5C_associated_SNPs_15269 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr1 116942124 116942124 1 + T G BLCA 116942110 + 116942090 116942130 41 AAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTGAA AAGAGACAGCCCAGAAATCCCAAAACAGACAAACGTGTGAA < 41bp 1 0.579971612317062 1 0.50360518693924 experiment 0.840056775365876 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942110 chr1:116942124 nonsynonymous SNV 0.988 5 35 hm5C_associated_SNPs_15270 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr7 150725686 150725686 1 + C A BLCA 150725672 + 150725652 150725692 41 GCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGCT GCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTATCAGCT < 41bp 1 0.113484114083894 1 0.249595046043396 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150725672 chr7:150725686 nonsynonymous SNV 0.984 4 35 hm5C_associated_SNPs_15273 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:150725659-150725695
64251 chr17 43220893 43220893 1 + C T BLCA 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TTGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.390368538462417 1 0.840431034564972 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220893 nonsynonymous SNV 0.993 1 2 hm5C_associated_SNPs_15274 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr18 48446835 48446835 1 + G A BLCA 48446838 + 48446818 48446858 41 GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCGAAGA GTTTTTAGATATGGCCGAAACACACTCATTCAGTTCGAAGA < 41bp 1 0.354313462737879 1 0.148431718349457 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ME2 ENSG00000082212 CDS Human protein_coding chr18:48446838 chr18:48446835 synonymous SNV . 0 18 hm5C_associated_SNPs_15276 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:48446820-48446840
64251 chr17 42427048 42427048 1 + G A BLCA 42427030 + 42427010 42427050 41 ATGCAGGTTTCTCTGTGTTCCACAGGCCGTGGCATGCGGGG ATGCAGGTTTCTCTGTGTTCCACAGGCCGTGGCATGCGAGG < 41bp 1 0.571027532554935 1 0.583874642848969 experiment 0.85794493489013 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42427030 chr17:42427048 nonsynonymous SNV 0.005 0 39 hm5C_associated_SNPs_15279 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42427041-42427063
64251 chr7 128486893 128486893 1 + G A BLCA 128486898 + 128486878 128486918 41 GGTAGCTGCACCGTGGAGTACATCCCCTTCACTCCTGGAGA GGTAGCTGCACCGTGAAGTACATCCCCTTCACTCCTGGAGA < 41bp 1 0.0405495353745744 1 0.0532926321029663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486898 chr7:128486893 nonsynonymous SNV 0.993 5 16 hm5C_associated_SNPs_15280 0 0 1 FXR2 POSTAR2 ENCODE chr7:128486890-128486903
64251 chr6 44199825 44199825 1 + G A BLCA 44199838 + 44199818 44199858 41 CAGCATCGCAGGCAGCAGCACCTGGGGTGAGGATGCCACAG CAGCATCACAGGCAGCAGCACCTGGGGTGAGGATGCCACAG < 41bp 1 0.300002074197559 1 0.444830775260925 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44199838 chr6:44199825 nonsynonymous SNV 0.497 0 8 hm5C_associated_SNPs_15281 0 0 6 DDX24 POSTAR2 ENCODE chr6:44199822-44199833
64251 chr13 115090580 115090580 1 + A G BLCA 115090577 + 115090557 115090597 41 CCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC CCAGTGTCTCCAGAGCTTCGCAAGCCCGGCCCACCACTATC < 41bp 1 0.489644040695509 1 0.419834792613983 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090577 chr13:115090580 synonymous SNV . 0 24 hm5C_associated_SNPs_15282 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:115090576-115090602
64251 chr1 39799722 39799722 1 + C A BLCA 39799715 + 39799695 39799735 41 ACAGTTGTGCAGTCCATTGACAGAGGTCTTTTGGAGAGAGA ACAGTTGTGCAGTCCATTGACAGAGGTATTTTGGAGAGAGA < 41bp 1 0.210929816208324 1 0.79917186498642 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MACF1 ENSG00000127603 CDS Human protein_coding chr1:39799715 chr1:39799722 nonsynonymous SNV 0.989 0 28 hm5C_associated_SNPs_15288 0 0 1 SAFB2 POSTAR2 ENCODE chr1:39799710-39799813
64251 chr7 44100395 44100395 1 + C T BLCA 44100392 + 44100372 44100412 41 GCAGCCGACGACACAGAGATCTCCTTTGACCCCGAGAACCT GCAGCCGACGACACAGAGATCTCTTTTGACCCCGAGAACCT < 41bp 1 0.317676366944295 1 0.171483367681503 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44100392 chr7:44100395 synonymous SNV . 0 24 hm5C_associated_SNPs_15289 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44100354-44100414
64251 chr20 30795782 30795782 1 + C T BLCA 30795786 + 30795766 30795806 41 CGGCCGCTGAGCGTGTCTTTCCTGCTGCTGCTTCTGCCGCT CGGCCGCTGAGCGTGTTTTTCCTGCTGCTGCTTCTGCCGCT < 41bp 1 0.441107514107279 1 0.154585927724838 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30795786 chr20:30795782 nonsynonymous SNV 0.048 0 17 hm5C_associated_SNPs_15290 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:30795764-30795790
64251 chr11 33308267 33308267 1 + C T BLCA 33308258 + 33308238 33308278 41 AGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCA AGGTCATAGCAGCTCAGGCACAGCAAGCTTACGTGCAGGCA < 41bp 1 0.747445140412972 1 0.382737845182419 experiment 0.505109719174055 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308258 chr11:33308267 nonsynonymous SNV 0.022 0 30 hm5C_associated_SNPs_15293 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:33308262-33308297
64251 chr17 33310224 33310224 1 + G A BLCA 33310210 + 33310190 33310230 41 GTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCAC GTTCTATCATTCCAGGGAAGCCATCTAAGATCACATGCCAC < 41bp 1 0.0384936304423853 1 0.156753957271576 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310210 chr17:33310224 nonsynonymous SNV 0.997 1 35 hm5C_associated_SNPs_15296 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33310216-33310254
64251 chr15 57545626 57545626 1 + G C BLCA 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC CAATTCAAACTATGCAGGATCAAGCCTTGTTGCAAGCAGTC < 41bp 1 0.221351898987111 1 0.433252036571503 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545626 nonsynonymous SNV 0.999 3 15 hm5C_associated_SNPs_15297 0 0 2 IGF2BP1 POSTAR2 ENCODE chr15:57545594-57545642
64251 chr10 96162370 96162370 1 + G A BLCA 96162358 + 96162338 96162378 41 TTGCCTCCTGGGGCGGCCGCCACCCACCCCCAGATGGTGGG TTGCCTCCTGGGGCGGCCGCCACCCACCCCCAAATGGTGGG < 41bp 1 0.447019118131266 1 0.514283180236816 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D12 ENSG00000108239 UTR5 Human protein_coding chr10:96162358 chr10:96162370 . . 0 33 hm5C_associated_SNPs_15298 0 0 3 AARS POSTAR2 ENCODE chr10:96162346-96162390
64251 chr4 123145733 123145733 1 + C G BLCA 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTCTCCAGCTGAGAGCACACGCTATGTTGTCAGCAGAAGG < 41bp 1 0.410975750319684 1 0.23302885890007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145733 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_15308 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chr14 102445745 102445745 1 + C G BLCA 102445731 + 102445711 102445751 41 CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTACGA CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCGCTACGA < 41bp 1 0.205744841996261 1 0.498553574085236 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102445731 chr14:102445745 nonsynonymous SNV 0.212 4 35 hm5C_associated_SNPs_15310 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102445724-102445761
64251 chr19 14574940 14574940 1 + A G BLCA 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAGAAGAGCTCGCGGGGTCCTCCTTCCAGCCCATCGAGC < 41bp 1 0.044879683875932 1 0.120672881603241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574940 nonsynonymous SNV 0.000 0 19 hm5C_associated_SNPs_15311 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr1 109807624 109807624 1 + G C BLCA 109807629 + 109807609 109807649 41 CTTGGGCCATACTGTGAGACCAGGTAAGCAGACCAGGGCAT CTTGGGCCATACTGTCAGACCAGGTAAGCAGACCAGGGCAT < 41bp 1 0.413606298886796 1 0.555056929588318 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109807629 chr1:109807624 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_15312 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:109807595-109807628
64251 chr17 37650822 37650822 1 + A G BLCA 37650826 + 37650806 37650846 41 CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGCCATTCG CTAGACAATGAGAAAGGGGGCTTCCCAATCACAGCCATTCG < 41bp 1 0.0473123891234977 1 0.05026775598526 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37650826 chr17:37650822 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_15313 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37650775-37650834
64251 chr1 39878175 39878175 1 + G A BLCA 39878188 + 39878168 39878208 41 CAGAGCAGGTCTTCCAGGATCTCCAGAGGAAGTCCCCAGAG CAGAGCAAGTCTTCCAGGATCTCCAGAGGAAGTCCCCAGAG < 41bp 1 0.617610606162573 1 0.874423205852509 experiment 0.764778787674854 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout KIAA0754 ENSG00000255103 CDS Human other chr1:39878188 chr1:39878175 synonymous SNV . 0 8 hm5C_associated_SNPs_15314 0 0 2 SAFB2 POSTAR2 ENCODE chr1:39878059-39878177
64251 chr19 41306707 41306707 1 + G A BLCA 41306701 + 41306681 41306721 41 CACCTCTACCACTGCCAGCCCTCTTCGGGACGGTTTTGGCG CACCTCTACCACTGCCAGCCCTCTTCAGGACGGTTTTGGCG < 41bp 1 0.120280173991696 1 0.396718859672546 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306701 chr19:41306707 nonsynonymous SNV 0.989 1 27 hm5C_associated_SNPs_15315 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:41306700-41306720
64251 chr19 34884827 34884827 1 + C G BLCA 34884810 + 34884790 34884830 41 AGCTCCCACTCATCCTGCTCCTGTTTCAGGACCAGCACTTC AGCTCCCACTCATCCTGCTCCTGTTTCAGGACCAGCAGTTC < 41bp 1 0.127767121104751 1 0.172495394945145 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34884810 chr19:34884827 nonsynonymous SNV 0.997 5 38 hm5C_associated_SNPs_15316 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34884819-34884851
64251 chr5 179151700 179151700 1 + C T BLCA 179151689 + 179151669 179151709 41 TGGTATGGAGTATAAGAAAACTGATGCACCTCAACCGGATG TGGTATGGAGTATAAGAAAACTGATGCACCTTAACCGGATG < 41bp 1 0.514166852117783 1 0.437645673751831 experiment 0.971666295764434 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151689 chr5:179151700 stopgain 0.955 1 32 hm5C_associated_SNPs_15317 0 0 58 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151700 179151700 1 + C T BLCA 179151698 + 179151678 179151718 41 GTATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAG GTATAAGAAAACTGATGCACCTTAACCGGATGTGAAGGAAG < 41bp 1 0.259449328453243 1 0.198771446943283 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151698 chr5:179151700 stopgain 0.955 1 23 hm5C_associated_SNPs_15318 0 0 58 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151700 179151700 1 + C T BLCA 179151704 + 179151684 179151724 41 GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAG GAAAACTGATGCACCTTAACCGGATGTGAAGGAAGAGGAAG < 41bp 1 0.58844160158208 1 0.562223315238953 experiment 0.823116796835841 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151704 chr5:179151700 stopgain 0.955 1 17 hm5C_associated_SNPs_15319 0 0 58 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr19 34949727 34949727 1 + A G BLCA 34949745 + 34949725 34949765 41 GCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAG GCGCTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAG < 41bp 1 0.333380797883467 1 0.0962076783180237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34949745 chr19:34949727 synonymous SNV . 0 3 hm5C_associated_SNPs_15320 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:34949688-34949730
64251 chr14 21967260 21967260 1 - G T BLCA 21967278 - 21967258 21967298 41 TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAACCA TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAAACA < 41bp 1 0.0160893679870423 1 0.0651327669620514 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control METTL3 ENSG00000165819 CDS Human protein_coding chr14:21967278 chr14:21967260 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_15321 0 0 11 METTL3 POSTAR2 GSE46705,GSM1135006 chr14:21967160-21967260
64251 chrX 47518321 47518321 1 - C T BLCA 47518340 - 47518320 47518360 41 GGTCTTCCCCCTCCCCACTCCCCAGGAGCCCATCATGGCGA GGTCTTCCCCCTCCCCACTCCCCAGGAGCCCATCATGGCAA < 41bp 1 0.481577286649212 1 0.589560866355896 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UXT ENSG00000126756 CDS Human protein_coding chrX:47518340 chrX:47518321 synonymous SNV . 0 40 hm5C_associated_SNPs_15322 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47518309-47518337
64251 chr10 76990693 76990693 1 + G A BLCA 76990674 + 76990654 76990694 41 AGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGA AGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAAA < 41bp 1 0.482723210274808 1 0.151665836572647 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76990674 chr10:76990693 synonymous SNV . 0 40 hm5C_associated_SNPs_15323 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:76990663-76990707
64251 chr10 76990693 76990693 1 + G A BLCA 76990677 + 76990657 76990697 41 TGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCA TGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAAAGCA < 41bp 1 0.27595639428363 1 0.143064439296722 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76990677 chr10:76990693 synonymous SNV . 0 37 hm5C_associated_SNPs_15324 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:76990663-76990707
64251 chr10 76990693 76990693 1 + G A BLCA 76990679 + 76990659 76990699 41 TGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATT TGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAAAGCATT < 41bp 1 0.401981786126161 1 0.478652775287628 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76990679 chr10:76990693 synonymous SNV . 0 35 hm5C_associated_SNPs_15325 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:76990663-76990707
64251 chrX 10155598 10155598 1 + G T BLCA 10155590 + 10155570 10155610 41 AAGGAGTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGC AAGGAGTCCATATGGGAGTTCATCAAGATCCTGCTGGATGC < 41bp 1 0.31724477629929 1 0.140746146440506 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN4 ENSG00000073464 CDS Human protein_coding chrX:10155590 chrX:10155598 nonsynonymous SNV 0.658 3 29 hm5C_associated_SNPs_15329 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:10155580-10155600
64251 chr2 27448053 27448053 1 + G A BLCA 27448037 + 27448017 27448057 41 TTGAGCTGACCGAGGATCGACGGGCCTTTGCTGCCAGAATG TTGAGCTGACCGAGGATCGACGGGCCTTTGCTGCCAAAATG < 41bp 1 0.458128894025122 1 0.625492811203003 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448037 chr2:27448053 nonsynonymous SNV 0.766 2 37 hm5C_associated_SNPs_15333 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr2 27448053 27448053 1 + G A BLCA 27448041 + 27448021 27448061 41 GCTGACCGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAG GCTGACCGAGGATCGACGGGCCTTTGCTGCCAAAATGGCAG < 41bp 1 0.0136110475263984 1 0.0868426263332367 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448041 chr2:27448053 nonsynonymous SNV 0.766 2 33 hm5C_associated_SNPs_15334 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr2 27448053 27448053 1 + G A BLCA 27448047 + 27448027 27448067 41 CGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAGAGATCG CGAGGATCGACGGGCCTTTGCTGCCAAAATGGCAGAGATCG < 41bp 1 0.331147798015938 1 0.0584559440612793 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448047 chr2:27448053 nonsynonymous SNV 0.766 2 27 hm5C_associated_SNPs_15335 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr14 103805628 103805628 1 + G C BLCA 103805638 + 103805618 103805658 41 TTAATGAGAAGATTAGAGAACAGATTAAGAAATACAGGCGC TTAATGAGAACATTAGAGAACAGATTAAGAAATACAGGCGC < 41bp 1 0.386775913354449 1 0.178159236907959 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805638 chr14:103805628 nonsynonymous SNV 0.980 2 11 hm5C_associated_SNPs_15336 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805506-103805667
64251 chr16 15788066 15788066 1 + C T BLCA 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCTG < 41bp 1 0.200146665143547 1 0.0574577152729034 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788066 nonsynonymous SNV 0.729 3 40 hm5C_associated_SNPs_15337 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr16:15788053-15788101
64251 chr19 1255046 1255046 1 + C G BLCA 1255058 + 1255038 1255078 41 GGTCTTCTCAGGGACCTTCTCTGGTAGGTGTCACAGCACAT GGTCTTCTGAGGGACCTTCTCTGGTAGGTGTCACAGCACAT < 41bp 1 0.732855894765651 1 0.465472757816315 experiment 0.534288210468699 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1255058 chr19:1255046 stopgain 1.000 1 9 hm5C_associated_SNPs_15338 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:1254994-1255053
64251 chr11 67052379 67052379 1 + C G BLCA 67052374 + 67052354 67052394 41 ACATGTCCAAGATGGGCAACCCCTTCCTGACCCAGTGGCAG ACATGTCCAAGATGGGCAACCCCTTGCTGACCCAGTGGCAG < 41bp 1 0.085854795914177 1 0.119154185056686 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052374 chr11:67052379 nonsynonymous SNV 0.994 2 26 hm5C_associated_SNPs_15339 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67052341-67052404
64251 chr11 67052379 67052379 1 + C G BLCA 67052376 + 67052356 67052396 41 ATGTCCAAGATGGGCAACCCCTTCCTGACCCAGTGGCAGCG ATGTCCAAGATGGGCAACCCCTTGCTGACCCAGTGGCAGCG < 41bp 1 0.293701951865063 1 0.173966079950333 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052376 chr11:67052379 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_15340 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67052341-67052404
64251 chr5 17275374 17275374 1 + G A BLCA 17275370 + 17275350 17275390 41 AAGAAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAA AAGAAGGGCTACAATGTGAACGACAAGAAAGCCAAGGAGAA < 41bp 1 0.686987396229925 1 0.171583443880081 experiment 0.626025207540151 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275370 chr5:17275374 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_15341 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275374 17275374 1 + G A BLCA 17275373 + 17275353 17275393 41 AAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAAAGA AAGGGCTACAATGTGAACGACAAGAAAGCCAAGGAGAAAGA < 41bp 1 0.680755293184001 1 0.164179027080536 experiment 0.638489413631999 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275373 chr5:17275374 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_15342 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275374 17275374 1 + G A BLCA 17275381 + 17275361 17275401 41 CAATGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG CAATGTGAACGACAAGAAAGCCAAGGAGAAAGACAAGAAGG < 41bp 1 0.33037195593213 1 0.413287550210953 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275381 chr5:17275374 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_15343 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr19 59057194 59057194 1 + C T BLCA 59057191 + 59057171 59057211 41 ACTGTGTGGAGTGCTCGGAGCCTCTGTGTGAGACCTGTGTA ACTGTGTGGAGTGCTCGGAGCCTTTGTGTGAGACCTGTGTA < 41bp 1 0.0443475780947605 1 0.0429597198963165 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057191 chr19:59057194 synonymous SNV . 0 24 hm5C_associated_SNPs_15344 0 0 39 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59057120-59057200
64251 chr19 59057194 59057194 1 + C T BLCA 59057205 + 59057185 59057225 41 TCGGAGCCTCTGTGTGAGACCTGTGTAGAGGCGCACCAGCG TCGGAGCCTTTGTGTGAGACCTGTGTAGAGGCGCACCAGCG < 41bp 1 0.419839962992058 1 0.109072506427765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057205 chr19:59057194 synonymous SNV . 0 10 hm5C_associated_SNPs_15345 0 0 39 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59057120-59057200
64251 chr19 10812162 10812162 1 + C T BLCA 10812147 + 10812127 10812167 41 GACAGTCAAGATGGCGGGAGCAGCTACCCAGGCTTCCCTGG GACAGTCAAGATGGCGGGAGCAGCTACCCAGGCTTTCCTGG < 41bp 1 0.508474368584724 1 0.479104280471802 experiment 0.983051262830552 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812147 chr19:10812162 nonsynonymous SNV 0.006 1 36 hm5C_associated_SNPs_15346 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:10812149-10812180
64251 chr16 53504333 53504333 1 + G C BLCA 53504331 + 53504311 53504351 41 TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG TGGAGGGATAACATTCTTCCCTCTCCAAGTCAATGTTGGGG < 41bp 1 0.0992368116280943 1 0.236796528100967 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504331 chr16:53504333 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_15347 0 0 4 DDX24 POSTAR2 ENCODE chr16:53504281-53504363
64251 chr10 126505169 126505169 1 + C G BLCA 126505159 + 126505139 126505179 41 TTACAGAAATCCATAACCATCAGCCTTGTTCAAAACTTTTT TTACAGAAATCCATAACCATCAGCCTTGTTGAAAACTTTTT < 41bp 1 0.25590210512678 1 0.118677794933319 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126505159 chr10:126505169 stopgain 1.000 0 31 hm5C_associated_SNPs_15348 0 0 1 PRPF8 POSTAR2 ENCODE chr10:126505161-126505220
64251 chr4 123192861 123192861 1 + G A BLCA 123192859 + 123192839 123192879 41 AGGAATATTGGAAAAGTCTTCAGAAACATTTGGACCAGCAG AGGAATATTGGAAAAGTCTTCAAAAACATTTGGACCAGCAG < 41bp 1 0.183590637730513 1 0.648221492767334 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123192859 chr4:123192861 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_15349 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr4:123192849-123192879
64251 chr14 90867659 90867659 1 + A G BLCA 90867648 + 90867628 90867668 41 TGATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTG TGATAAAGATGGCGATGGCACCATCACAACAGAGGAACTTG < 41bp 1 0.0729257129826134 1 0.0672257840633392 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867648 chr14:90867659 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_15350 0 0 24 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr14 90867659 90867659 1 + A G BLCA 90867649 + 90867629 90867669 41 GATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTGG GATAAAGATGGCGATGGCACCATCACAACAGAGGAACTTGG < 41bp 1 0.463223884973596 1 0.319206357002258 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867649 chr14:90867659 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_15351 0 0 24 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr11 110035800 110035800 1 + C A BLCA 110035817 + 110035797 110035837 41 CAACACATGCACCCTCACAGCCGCCTTAATCCTCAACCGTT CAAAACATGCACCCTCACAGCCGCCTTAATCCTCAACCGTT < 41bp 1 0.118020616134692 1 0.0864737331867218 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035817 chr11:110035800 nonsynonymous SNV 0.998 4 4 hm5C_associated_SNPs_15352 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:110035798-110035822
64251 chr7 73636008 73636008 1 + C T BLCA 73636001 + 73635981 73636021 41 TGGAGTATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA TGGAGTATTACAACTGGGGGCGGTTCTTGAAGCCCCCAGAA < 41bp 1 0.182828114371594 1 0.254678398370743 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636001 chr7:73636008 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_15354 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636008 73636008 1 + C T BLCA 73636013 + 73635993 73636033 41 ACTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG ACTGGGGGCGGTTCTTGAAGCCCCCAGAAGGTGAGGCGAAG < 41bp 1 0.146733067858485 1 0.138333201408386 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636013 chr7:73636008 nonsynonymous SNV 0.001 0 16 hm5C_associated_SNPs_15355 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636008 73636008 1 + C T BLCA 73636014 + 73635994 73636034 41 CTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG CTGGGGGCGGTTCTTGAAGCCCCCAGAAGGTGAGGCGAAGG < 41bp 1 0.448317508330722 1 0.175954401493073 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636014 chr7:73636008 nonsynonymous SNV 0.001 0 15 hm5C_associated_SNPs_15356 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636008 73636008 1 + C T BLCA 73636015 + 73635995 73636035 41 TGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA TGGGGGCGGTTCTTGAAGCCCCCAGAAGGTGAGGCGAAGGA < 41bp 1 0.223349377208368 1 0.308219522237778 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636015 chr7:73636008 nonsynonymous SNV 0.001 0 14 hm5C_associated_SNPs_15357 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636008 73636008 1 + C T BLCA 73636016 + 73635996 73636036 41 GGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC GGGGGCGGTTCTTGAAGCCCCCAGAAGGTGAGGCGAAGGAC < 41bp 1 0.483689266611356 1 0.32285749912262 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636016 chr7:73636008 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_15358 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636008 73636008 1 + C T BLCA 73636017 + 73635997 73636037 41 GGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA GGGGCGGTTCTTGAAGCCCCCAGAAGGTGAGGCGAAGGACA < 41bp 1 0.607811044026918 1 0.832887291908264 experiment 0.784377911946163 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636017 chr7:73636008 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_15359 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr3 52245381 52245381 1 + C T BLCA 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTT < 41bp 1 0.275512905262052 1 0.368093281984329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245381 synonymous SNV . 0 41 hm5C_associated_SNPs_15360 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52245370-52245399
64251 chr5 33459922 33459922 1 + G C BLCA 33459929 + 33459909 33459949 41 CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACCCATG CCTTTGAGGTGGACAAGGAGCTGTTTGCCCTGAAACCCATG < 41bp 1 0.455958880710671 1 0.09645876288414 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33459929 chr5:33459922 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_15361 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:33459846-33459962
64251 chr3 66430871 66430871 1 - G T BLCA 66430873 - 66430853 66430893 41 GCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGC GCAAGGTTGTATCACCCGGACTACACAGAGCTACAGCCTGC < 41bp 1 0.470777204077535 1 0.0648505389690399 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430873 chr3:66430871 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_15362 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:66430832-66430884
64251 chr8 145138146 145138146 1 + C T BLCA 145138162 + 145138142 145138182 41 TTTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTT TTTGTGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTT < 41bp 1 0.674822032744253 1 0.555763959884644 experiment 0.650355934511495 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145138162 chr8:145138146 nonsynonymous SNV 0.198 0 5 hm5C_associated_SNPs_15364 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:145138140-145138160
64251 chr14 102476256 102476256 1 + G C BLCA 102476275 + 102476255 102476295 41 TGAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC TCAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC < 41bp 1 0.0436781259843268 1 0.345095813274384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102476275 chr14:102476256 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_15365 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102476193-102476327
64251 chr1 39910468 39910468 1 + G T BLCA 39910457 + 39910437 39910477 41 AGACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT AGACAGAACAGAGTGTAGCACTTTTGGAGCATAAGTGGCAT < 41bp 1 0.0673769615999221 1 0.0800431370735168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910457 chr1:39910468 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_15367 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910468 39910468 1 + G T BLCA 39910466 + 39910446 39910486 41 AGAGTGTAGCACTTTTGGAGCAGAAGTGGCATGTGGTCAGC AGAGTGTAGCACTTTTGGAGCATAAGTGGCATGTGGTCAGC < 41bp 1 0.139325873240438 1 0.0662060379981995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910466 chr1:39910468 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_15368 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910468 39910468 1 + G T BLCA 39910475 + 39910455 39910495 41 CACTTTTGGAGCAGAAGTGGCATGTGGTCAGCAGTAAGATG CACTTTTGGAGCATAAGTGGCATGTGGTCAGCAGTAAGATG < 41bp 1 0.0865121493382404 1 0.0697435438632965 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910475 chr1:39910468 nonsynonymous SNV 0.998 3 14 hm5C_associated_SNPs_15369 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr1 39910468 39910468 1 + G T BLCA 39910486 + 39910466 39910506 41 CAGAAGTGGCATGTGGTCAGCAGTAAGATGGAAGAAAGAAA CATAAGTGGCATGTGGTCAGCAGTAAGATGGAAGAAAGAAA < 41bp 1 0.116331518230915 1 0.452091962099075 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910486 chr1:39910468 nonsynonymous SNV 0.998 3 3 hm5C_associated_SNPs_15370 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:39910440-39910480
64251 chr14 60591527 60591527 1 + C G BLCA 60591543 + 60591523 60591563 41 AGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG AGTTGTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG < 41bp 1 0.218788434723215 1 0.274068534374237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591543 chr14:60591527 nonsynonymous SNV 0.591 0 5 hm5C_associated_SNPs_15371 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:60591507-60591545
64251 chr3 158519924 158519924 1 + C T BLCA 158519940 + 158519920 158519960 41 CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG CTCTTCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG < 41bp 1 0.450002410313763 1 0.456532269716263 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519940 chr3:158519924 nonsynonymous SNV 0.001 0 5 hm5C_associated_SNPs_15372 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr4 1932436 1932436 1 + G A BLCA 1932419 + 1932399 1932439 41 TGCTCAGGTCACAGTGGAGTCTGCTGAGTGAGAAGCAGAGA TGCTCAGGTCACAGTGGAGTCTGCTGAGTGAGAAGCAAAGA < 41bp 1 0.44627935698838 1 0.201279312372208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1932419 chr4:1932436 synonymous SNV . 0 38 hm5C_associated_SNPs_15373 0 0 8 LIN28A POSTAR2 GSE44616,GSM1087848 chr4:1932400-1932436
64251 chrX 73044223 73044223 1 - T A BLCA 73044221 - 73044201 73044241 41 AAGGCACCATATAAATGTAACTGTTGATTTTCTCACTTGGT AAGGCACCATATAAATGTTACTGTTGATTTTCTCACTTGGT < 41bp 1 0.0269081556668029 1 0.0689023435115814 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044221 chrX:73044223 . . 0 19 hm5C_associated_SNPs_15374 0 0 70 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr17 55083551 55083551 1 + G A BLCA 55083541 + 55083521 55083561 41 TGTTTTTTTCTAGGTTCCTTCTGACCAAGGGGACATGGCTC TGTTTTTTTCTAGGTTCCTTCTGACCAAGGAGACATGGCTC < 41bp 1 0.313307416920984 1 0.721314072608948 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55083541 chr17:55083551 synonymous SNV . 0 31 hm5C_associated_SNPs_15375 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:55083551-55083582
64251 chr7 156746908 156746908 1 + C T BLCA 156746911 + 156746891 156746931 41 GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAG GCTCTCATGGGTGCCTGTGTCACTGCCTCGGCCATGCCCAG < 41bp 1 0.673559924704545 1 0.449502021074295 experiment 0.65288015059091 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746911 chr7:156746908 synonymous SNV . 0 18 hm5C_associated_SNPs_15376 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:156746895-156746922
64251 chrX 1720174 1720174 1 + G A BLCA 1720158 + 1720138 1720178 41 ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGGAGAC ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGAAGAC < 41bp 1 0.787369305091797 1 0.862394869327545 experiment 0.425261389816406 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1720158 chrX:1720174 nonsynonymous SNV 0.000 0 37 hm5C_associated_SNPs_15378 0 0 1 EIF3H POSTAR2 ENCODE chrX:1720146-1720248
64251 chr1 86047753 86047753 1 + C T BLCA 86047751 + 86047731 86047771 41 TGTGTCCCCAAGAACTATCTCTCCCCAACTTGGGCTGTCCC TGTGTCCCCAAGAACTATCTCTTCCCAACTTGGGCTGTCCC < 41bp 1 0.156487996936276 1 0.0560724437236786 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047751 chr1:86047753 synonymous SNV . 0 23 hm5C_associated_SNPs_15380 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:86047734-86047766
64251 chr11 129991605 129991605 1 + C G BLCA 129991624 + 129991604 129991644 41 TCAGACAAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAG TGAGACAAAGATTATTGGATCTGTGTCAAAAGAAGAGGAAG < 41bp 1 0.258820372315818 1 0.147396355867386 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout APLP2 ENSG00000084234 CDS Human protein_coding chr11:129991624 chr11:129991605 nonsynonymous SNV 0.918 1 2 hm5C_associated_SNPs_15382 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:129991561-129991608
64251 chrX 73047089 73047089 1 - C A BLCA 73047076 - 73047056 73047096 41 CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA CCTGCCTTATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA < 41bp 1 0.248783530540416 1 0.127440392971039 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047076 chrX:73047089 . . 0 8 hm5C_associated_SNPs_15383 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047089 73047089 1 - C A BLCA 73047096 - 73047076 73047116 41 GGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAAC GGCAGAGGGGCTTCCTAACCCCTGCCTTATAGGTGCAGAAC < 41bp 1 0.102125351240533 1 0.340937316417694 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047096 chrX:73047089 . . 0 28 hm5C_associated_SNPs_15384 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047089 73047089 1 - C A BLCA 73047098 - 73047078 73047118 41 GTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGA GTGGCAGAGGGGCTTCCTAACCCCTGCCTTATAGGTGCAGA < 41bp 1 0.175727238383216 1 0.38289549946785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047098 chrX:73047089 . . 0 30 hm5C_associated_SNPs_15385 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047089 73047089 1 - C A BLCA 73047102 - 73047082 73047122 41 ATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTG ATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTTATAGGTG < 41bp 1 0.0993828702235452 1 0.149033308029175 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047102 chrX:73047089 . . 0 34 hm5C_associated_SNPs_15386 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047089 73047089 1 - C A BLCA 73047103 - 73047083 73047123 41 CATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGT CATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTTATAGGT < 41bp 1 0.0561458047935309 1 0.0454576015472412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047103 chrX:73047089 . . 0 35 hm5C_associated_SNPs_15387 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047089 73047089 1 - C A BLCA 73047106 - 73047086 73047126 41 TGTCATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATA TGTCATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTTATA < 41bp 1 0.0746051224982496 1 0.15254008769989 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047106 chrX:73047089 . . 0 38 hm5C_associated_SNPs_15388 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr15 41195241 41195241 1 + A G BLCA 41195230 + 41195210 41195250 41 TTTTACCTCTTCCTCTGTGGCCATATGTTCCATGCTGACTG TTTTACCTCTTCCTCTGTGGCCATATGTTCCGTGCTGACTG < 41bp 1 0.184456478090965 1 0.0915184915065765 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41195230 chr15:41195241 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_15391 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:41195177-41195263
64251 chr3 52325025 52325025 1 + G A BLCA 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGAAGGACAACCTCCCGGACCGCGATGCGCTGCGGG < 41bp 1 0.526826485866099 1 0.761197865009308 experiment 0.946347028267801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325025 nonsynonymous SNV 0.712 1 8 hm5C_associated_SNPs_15392 0 0 4 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr6 7580988 7580988 1 + C G BLCA 7580985 + 7580965 7581005 41 GCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAAC GCAGAAAGCAAACAGTAGTGCGAGGGAGACAATAAACAAAC < 41bp 1 0.667840251379857 1 0.81274688243866 experiment 0.664319497240285 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7580985 chr6:7580988 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_15393 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7580979-7581020
64251 chr3 15262300 15262300 1 + G A BLCA 15262290 + 15262270 15262310 41 TGTTCCTCTCTGTTATAGAGCAGAAGCGCTGAGTGAGCCTT TGTTCCTCTCTGTTATAGAGCAGAAGCGCTAAGTGAGCCTT < 41bp 1 0.736863754730846 1 0.153551340103149 experiment 0.526272490538308 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15262290 chr3:15262300 synonymous SNV . 0 31 hm5C_associated_SNPs_15394 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:15262285-15262327
64251 chr16 28834730 28834730 1 + G T BLCA 28834747 + 28834727 28834767 41 CGGGCCTCCAGCGGCCGCCTCCCCCTGCCTGGGGCCTGTGG CGGTCCTCCAGCGGCCGCCTCCCCCTGCCTGGGGCCTGTGG < 41bp 1 0.330460292241232 1 0.0885563790798187 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28834747 chr16:28834730 synonymous SNV . 0 4 hm5C_associated_SNPs_15397 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585668 chr16:28834730-28834753
64251 chr12 124158196 124158196 1 + G T BLCA 124158178 + 124158158 124158198 41 TCAGAAGGTGTTGGAAGTGACAGTGAGGTGGAAGAGAGGTC TCAGAAGGTGTTGGAAGTGACAGTGAGGTGGAAGAGAGTTC < 41bp 1 0.381411457429514 1 0.275694608688354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124158178 chr12:124158196 nonsynonymous SNV 0.020 2 39 hm5C_associated_SNPs_15398 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr12:124158167-124158216
64251 chr19 40882622 40882622 1 + G C BLCA 40882624 + 40882604 40882644 41 TCGGAGCCATCCATGCGGGCCTTCCTGCTCTCTCTGGCTGC TCGGAGCCATCCATGCGGCCCTTCCTGCTCTCTCTGGCTGC < 41bp 1 0.111822619586133 1 0.0169579982757568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40882624 chr19:40882622 nonsynonymous SNV 0.886 0 19 hm5C_associated_SNPs_15399 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:40882609-40882639
64251 chr21 33032093 33032093 1 + A G BLCA 33032103 + 33032083 33032123 41 ATGGCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCC ATGGCGACGAGGGCCGTGTGCGTGCTGAAGGGCGACGGCCC < 41bp 1 0.747032612976249 1 0.23314693570137 experiment 0.505934774047502 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOD1 ENSG00000142168 CDS Human protein_coding chr21:33032103 chr21:33032093 nonsynonymous SNV 0.902 1 11 hm5C_associated_SNPs_15403 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819209 chr21:33031980-33032120
64251 chr1 70687346 70687346 1 + C A BLCA 70687362 + 70687342 70687382 41 CCAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGC CCAGAACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGC < 41bp 1 0.631448779562368 1 0.708415448665619 experiment 0.737102440875264 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687362 chr1:70687346 nonsynonymous SNV 0.876 1 5 hm5C_associated_SNPs_15404 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:70687271-70687364
64251 chr1 70687346 70687346 1 + C A BLCA 70687363 + 70687343 70687383 41 CAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGCG CAGAACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGCG < 41bp 1 0.546913434453238 1 0.51585590839386 experiment 0.906173131093524 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687363 chr1:70687346 nonsynonymous SNV 0.876 1 4 hm5C_associated_SNPs_15405 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:70687271-70687364
64251 chr2 37475333 37475333 1 + A G BLCA 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATGTGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA < 41bp 1 0.400789880262967 1 0.497036188840866 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475333 nonsynonymous SNV 0.983 3 4 hm5C_associated_SNPs_15406 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475333 37475333 1 + A G BLCA 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATGTGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT < 41bp 1 0.410268471055376 1 0.337448716163635 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475333 nonsynonymous SNV 0.983 3 3 hm5C_associated_SNPs_15407 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr5 33455765 33455765 1 + G C BLCA 33455756 + 33455736 33455776 41 AGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGACTGGAA AGAAAATCATTAAAGAAAAACAAGCTTTTCAAAGACTGGAA < 41bp 1 0.320246474071886 1 0.330920398235321 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33455756 chr5:33455765 nonsynonymous SNV 0.996 1 30 hm5C_associated_SNPs_15408 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:33455716-33455800
64251 chr1 70687345 70687345 1 + G T BLCA 70687362 + 70687342 70687382 41 CCAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGC CCATCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGC < 41bp 1 0.600763594020486 1 0.655750036239624 experiment 0.798472811959027 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687362 chr1:70687345 nonsynonymous SNV 0.896 1 4 hm5C_associated_SNPs_15409 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:70687271-70687364
64251 chr1 70687345 70687345 1 + G T BLCA 70687363 + 70687343 70687383 41 CAGCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGCG CATCACTGCAGGTCCGGGCCCCAGCGGCGGGCCCGGTGGCG < 41bp 1 0.607559678099124 1 0.498528987169266 experiment 0.784880643801751 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70687363 chr1:70687345 nonsynonymous SNV 0.896 1 3 hm5C_associated_SNPs_15410 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:70687271-70687364
64251 chr4 103522086 103522086 1 + C G BLCA 103522101 + 103522081 103522121 41 ATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT ATTCTGAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT < 41bp 1 0.178924878457587 1 0.372961401939392 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103522101 chr4:103522086 nonsynonymous SNV 0.963 0 6 hm5C_associated_SNPs_15411 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:103522065-103522092
64251 chr6 30692163 30692163 1 + G C BLCA 30692147 + 30692127 30692167 41 GCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGA GCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAACAGGA < 41bp 1 0.671825485170609 1 0.722289502620697 experiment 0.656349029658781 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692147 chr6:30692163 nonsynonymous SNV 0.979 0 37 hm5C_associated_SNPs_15412 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30692106-30692172
64251 chr12 57604261 57604261 1 + C G BLCA 57604244 + 57604224 57604264 41 CACTGTCGCAATGGGGGCACCTGTGCTGCCTCCCCCTCTGG CACTGTCGCAATGGGGGCACCTGTGCTGCCTCCCCCTGTGG < 41bp 1 0.13926748102704 1 0.176170766353607 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604244 chr12:57604261 nonsynonymous SNV 0.032 0 38 hm5C_associated_SNPs_15413 0 0 1 RPS3 POSTAR2 ENCODE chr12:57604211-57604263
64251 chr1 198233300 198233300 1 + G A BLCA 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTCATTAAAGATAATGAACTAAA < 41bp 1 0.205822766854502 1 0.355567902326584 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233300 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_15417 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:198233273-198233300
64251 chr14 24707973 24707973 1 + G C BLCA 24707977 + 24707957 24707997 41 GAATCCAATCTTCAGTGAGGCGTGCTAGACCTGAGCAGTTC GAATCCAATCTTCAGTCAGGCGTGCTAGACCTGAGCAGTTC < 41bp 1 0.467325303453128 1 0.254956066608429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPR2 ENSG00000100938 CDS Human protein_coding chr14:24707977 chr14:24707973 nonsynonymous SNV 0.589 0 17 hm5C_associated_SNPs_15418 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:24707954-24707980
64251 chrX 47083822 47083822 1 + G T BLCA 47083814 + 47083794 47083834 41 CGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGG CGAGGACTTGAAGATGGGGTCTGATGGGTAGAGTGACCAGG < 41bp 1 0.401603449386662 1 0.0933302640914917 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083814 chrX:47083822 stopgain 1.000 1 29 hm5C_associated_SNPs_15419 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47083782-47083848
64251 chr1 117618442 117618442 1 + C A BLCA 117618425 + 117618405 117618445 41 GTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGG GTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCACGG < 41bp 1 0.0851023149715816 1 0.107341945171356 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618425 chr1:117618442 synonymous SNV . 0 38 hm5C_associated_SNPs_15420 0 0 6 BUD13 POSTAR2 ENCODE chr1:117618414-117618475
64251 chr19 14142711 14142711 1 + C T BLCA 14142724 + 14142704 14142744 41 CCCCTTTCTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTG CCCCTTTTTGGCTGTGGCCGCTGCCCAAGCTGGCGCTGCTG < 41bp 1 0.396438596674948 1 0.350324362516403 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IL27RA ENSG00000104998 CDS Human protein_coding chr19:14142724 chr19:14142711 synonymous SNV . 0 8 hm5C_associated_SNPs_15421 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:14142710-14142711
64251 chr11 64978304 64978304 1 + C T BLCA 64978306 + 64978286 64978326 41 ATTTTTCAAAACTCTGGACACAGATCTGGATGGAGTTGTGA ATTTTTCAAAACTCTGGATACAGATCTGGATGGAGTTGTGA < 41bp 1 0.14167386446292 1 0.0947071611881256 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64978306 chr11:64978304 synonymous SNV . 0 19 hm5C_associated_SNPs_15422 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:64978302-64978323
64251 chr1 235577754 235577754 1 + G A BLCA 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCCAACAGGAGGATCCTTTATTCGTCCGAACAAGG < 41bp 1 0.0107089117517425 1 0.0346108078956604 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577754 synonymous SNV . 0 10 hm5C_associated_SNPs_15423 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:235577754-235577779
64251 chr1 228879189 228879189 1 + G C BLCA 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCCTAGTTGCAACGCAGTC < 41bp 1 0.0925332975995145 1 0.188937127590179 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879189 nonsynonymous SNV 0.477 5 32 hm5C_associated_SNPs_15424 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:228879180-228879200
64251 chr11 63994361 63994361 1 + C A BLCA 63994351 + 63994331 63994371 41 GCCTATTGGCTCTCGGGGGCCACAGCTGCTCCTGCGCCTGG GCCTATTGGCTCTCGGGGGCCACAGCTGCTACTGCGCCTGG < 41bp 1 0.611339472054891 1 0.212458997964859 experiment 0.777321055890219 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994351 chr11:63994361 synonymous SNV . 0 31 hm5C_associated_SNPs_15425 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr19 1434829 1434829 1 + C T BLCA 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTTGGGGGGCCCCCCCGCCGGCGGCAGCGG < 41bp 1 0.294524440870968 1 0.158483535051346 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434829 nonsynonymous SNV 0.955 1 14 hm5C_associated_SNPs_15426 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434829 1434829 1 + C T BLCA 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTTGGGGGGCCCCCCCGCCGGCGGCAGCGGC < 41bp 1 0.376039760048142 1 0.176503568887711 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434829 nonsynonymous SNV 0.955 1 13 hm5C_associated_SNPs_15427 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434829 1434829 1 + C T BLCA 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTTGGGGGGCCCCCCCGCCGGCGGCAGCGGCT < 41bp 1 0.461231017288944 1 0.366003692150116 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434829 nonsynonymous SNV 0.955 1 12 hm5C_associated_SNPs_15428 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434829 1434829 1 + C T BLCA 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTTGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT < 41bp 1 0.746390519989185 1 0.147222191095352 experiment 0.507218960021629 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434829 nonsynonymous SNV 0.955 1 11 hm5C_associated_SNPs_15429 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr12 65632588 65632588 1 + T C BLCA 65632568 + 65632548 65632588 41 ACGTGCTTTTGTTACTGTAACTCACAGATTATTGTTGTTAT ACGTGCTTTTGTTACTGTAACTCACAGATTATTGTTGTTAC < 41bp 1 0.186546310485405 1 0.115595400333405 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65632568 chr12:65632588 nonsynonymous SNV 0.998 2 41 hm5C_associated_SNPs_15438 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:65632574-65632603
64251 chr16 70562829 70562829 1 + C T BLCA 70562823 + 70562803 70562843 41 CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC CCCGTGGGAAGATCTTGGAGCTGCTTTGCCCAGACCCCAAC < 41bp 1 0.367694006194206 1 0.113999664783478 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70562823 chr16:70562829 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_15439 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:70562781-70562865
64251 chr11 64950958 64950958 1 + C G BLCA 64950967 + 64950947 64950987 41 GACTGCTGGCTCTTGGCGGCCATCGCCTCCCTCACTCTCAA GACTGCTGGCTGTTGGCGGCCATCGCCTCCCTCACTCTCAA < 41bp 1 0.247761304810031 1 0.180250585079193 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950967 chr11:64950958 synonymous SNV . 0 12 hm5C_associated_SNPs_15440 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:64950958-64950959
64251 chr17 40714723 40714723 1 + C T BLCA 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTTG < 41bp 1 0.556907573010405 1 0.337471723556519 experiment 0.886184853979189 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714723 nonsynonymous SNV 0.944 1 40 hm5C_associated_SNPs_15441 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr12 22208204 22208204 1 + G C BLCA 22208197 + 22208177 22208217 41 AGCTCTACCTCACTAGATGCCATCATAGAATTTCTTAATTA AGCTCTACCTCACTAGATGCCATCATACAATTTCTTAATTA < 41bp 1 0.46639519676336 1 0.0304044485092163 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22208197 chr12:22208204 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_15442 0 0 2 EWSR1 POSTAR2 SRX029344 chr12:22208204-22208225
64251 chr2 99182131 99182131 1 + G A BLCA 99182143 + 99182123 99182163 41 GAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGAC GAGGACATAAGCCTTGGGATCATGGACTTGAGGAACGTGAC < 41bp 1 0.354968540958104 1 0.273736894130707 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99182143 chr2:99182131 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_15443 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:99182108-99182131
64251 chr11 57575892 57575892 1 + C T BLCA 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGCGTTAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC < 41bp 1 0.0870221913083921 1 0.0448925793170929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575892 stopgain 1.000 1 9 hm5C_associated_SNPs_15444 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57575863-57575903
64251 chr16 67914796 67914796 1 + G A BLCA 67914803 + 67914783 67914823 41 CCCCTCCCTCCTGGAGGCAGCCTTGACCCAGGAGGCCTCGA CCCCTCCCTCCTGAAGGCAGCCTTGACCCAGGAGGCCTCGA < 41bp 1 0.0313427528391566 1 0.1311896443367 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914803 chr16:67914796 nonsynonymous SNV 0.993 4 14 hm5C_associated_SNPs_15445 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr16:67914774-67914796
64251 chr2 32339806 32339806 1 + C T BLCA 32339810 + 32339790 32339830 41 GGATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTA GGATCTGCAGGCCTTTTAGGCCACCATAGAGCACCTAGTTA < 41bp 1 0.105169738761967 1 0.0565356314182281 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339810 chr2:32339806 nonsynonymous SNV 0.862 1 17 hm5C_associated_SNPs_15446 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:32339780-32339843
64251 chr2 32339806 32339806 1 + C T BLCA 32339811 + 32339791 32339831 41 GATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTAC GATCTGCAGGCCTTTTAGGCCACCATAGAGCACCTAGTTAC < 41bp 1 0.790240526591549 1 0.14732638001442 experiment 0.419518946816902 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339811 chr2:32339806 nonsynonymous SNV 0.862 1 16 hm5C_associated_SNPs_15447 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:32339780-32339843
64251 chr2 32339806 32339806 1 + C T BLCA 32339813 + 32339793 32339833 41 TCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTACAG TCTGCAGGCCTTTTAGGCCACCATAGAGCACCTAGTTACAG < 41bp 1 0.272791817078029 1 0.0547998249530792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339813 chr2:32339806 nonsynonymous SNV 0.862 1 14 hm5C_associated_SNPs_15448 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:32339780-32339843
64251 chr12 112915812 112915812 1 + G A BLCA 112915794 + 112915774 112915814 41 CTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAGAG CTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAAAG < 41bp 1 0.575829301245864 1 0.270248502492905 experiment 0.848341397508272 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915794 chr12:112915812 nonsynonymous SNV 0.999 2 39 hm5C_associated_SNPs_15449 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr10 12159712 12159712 1 + C T BLCA 12159721 + 12159701 12159741 41 ACCAGGAACAACATTTAACCCGGTCATTGGTGATTCATCTG ACCAGGAACAATATTTAACCCGGTCATTGGTGATTCATCTG < 41bp 1 0.169016804223425 1 0.0632751286029816 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12159721 chr10:12159712 nonsynonymous SNV 0.999 1 12 hm5C_associated_SNPs_15450 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:12159700-12159720
64251 chr5 132427025 132427025 1 + G A BLCA 132427041 + 132427021 132427061 41 AAATGAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG AAATAAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG < 41bp 1 0.288308150475949 1 0.470790594816208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427041 chr5:132427025 nonsynonymous SNV 0.983 1 5 hm5C_associated_SNPs_15451 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr7 140404733 140404733 1 + G C BLCA 140404750 + 140404730 140404770 41 ACTGAAGGTGTAGACTCAGCCTCACTCTGTACAAGTGGGTG ACTCAAGGTGTAGACTCAGCCTCACTCTGTACAAGTGGGTG < 41bp 1 0.210720575286028 1 0.172384738922119 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140404750 chr7:140404733 stoploss 0.552 0 4 hm5C_associated_SNPs_15452 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr7:140404671-140404750
64251 chr11 12243284 12243284 1 + C A BLCA 12243280 + 12243260 12243300 41 AAGAGCTGGAACCAGGGCACCCCTCCCCTGGAGCTGCTGGC AAGAGCTGGAACCAGGGCACCCCTACCCTGGAGCTGCTGGC < 41bp 1 0.169862727763907 1 0.131731301546097 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12243280 chr11:12243284 nonsynonymous SNV 0.766 0 25 hm5C_associated_SNPs_15453 0 0 1 FXR2 POSTAR2 ENCODE chr11:12243252-12243305
64251 chr19 49377935 49377935 1 + G C BLCA 49377943 + 49377923 49377963 41 ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAG ACTTCAGGGGCTCGGGATATCGACCTGGAAAAGAGACAGAG < 41bp 1 0.615384549737356 1 0.748502016067505 experiment 0.769230900525289 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377943 chr19:49377935 nonsynonymous SNV 0.019 2 13 hm5C_associated_SNPs_15454 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49377919-49377944
64251 chr12 57588463 57588463 1 + C T BLCA 57588474 + 57588454 57588494 41 TGAACATGGCGAGGACGAGACCCACTGCAGTGAGTGACCAC TGAACATGGTGAGGACGAGACCCACTGCAGTGAGTGACCAC < 41bp 1 0.0374849503042203 1 0.0358318090438843 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57588474 chr12:57588463 synonymous SNV . 0 10 hm5C_associated_SNPs_15456 0 0 2 PPIG POSTAR2 ENCODE chr12:57588456-57588482
64251 chr11 71946465 71946465 1 + G C BLCA 71946459 + 71946439 71946479 41 GCTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACC GCTCCATGAAGGTGCGGGTGCCCACGCAGCGCCTGGGCACC < 41bp 1 0.0966762875033806 1 0.070339173078537 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946459 chr11:71946465 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_15457 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946460 + 71946440 71946480 41 CTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCC CTCCATGAAGGTGCGGGTGCCCACGCAGCGCCTGGGCACCC < 41bp 1 0.234931918329519 1 0.0634771883487701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946460 chr11:71946465 nonsynonymous SNV 0.996 2 26 hm5C_associated_SNPs_15458 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946461 + 71946441 71946481 41 TCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCCG TCCATGAAGGTGCGGGTGCCCACGCAGCGCCTGGGCACCCG < 41bp 1 0.675224979479805 1 0.289904296398163 experiment 0.64955004104039 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946461 chr11:71946465 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_15459 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCACGCAGCGCCTGGGCACCCGTGAGCGGCTCTACGG < 41bp 1 0.382062397721179 1 0.0381741225719452 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946465 nonsynonymous SNV 0.996 2 10 hm5C_associated_SNPs_15460 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCACGCAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG < 41bp 1 0.302737684776419 1 0.0652424395084381 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946465 nonsynonymous SNV 0.996 2 8 hm5C_associated_SNPs_15461 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCACGCAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG < 41bp 1 0.174630146036012 1 0.493315488100052 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946465 nonsynonymous SNV 0.996 2 7 hm5C_associated_SNPs_15462 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946465 71946465 1 + G C BLCA 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCACGCAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG < 41bp 1 0.731940386967742 1 0.615382134914398 experiment 0.536119226064516 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946465 nonsynonymous SNV 0.996 2 6 hm5C_associated_SNPs_15463 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr10 85909866 85909866 1 + C A BLCA 85909855 + 85909835 85909875 41 CTCTGACAATATTAGGGGGTCCTCTTCTCATCAGAGCTGCA CTCTGACAATATTAGGGGGTCCTCTTCTCATAAGAGCTGCA < 41bp 1 0.0579061366824604 1 0.0280451476573944 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GHITM ENSG00000165678 CDS Human protein_coding chr10:85909855 chr10:85909866 synonymous SNV . 0 32 hm5C_associated_SNPs_15471 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:85909811-85909933
64251 chr10 85909866 85909866 1 + C A BLCA 85909856 + 85909836 85909876 41 TCTGACAATATTAGGGGGTCCTCTTCTCATCAGAGCTGCAT TCTGACAATATTAGGGGGTCCTCTTCTCATAAGAGCTGCAT < 41bp 1 0.332834926755106 1 0.0391121506690979 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GHITM ENSG00000165678 CDS Human protein_coding chr10:85909856 chr10:85909866 synonymous SNV . 0 31 hm5C_associated_SNPs_15472 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:85909811-85909933
64251 chr10 85909866 85909866 1 + C A BLCA 85909858 + 85909838 85909878 41 TGACAATATTAGGGGGTCCTCTTCTCATCAGAGCTGCATGG TGACAATATTAGGGGGTCCTCTTCTCATAAGAGCTGCATGG < 41bp 1 0.499687980107581 1 0.251644492149353 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GHITM ENSG00000165678 CDS Human protein_coding chr10:85909858 chr10:85909866 synonymous SNV . 0 29 hm5C_associated_SNPs_15473 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:85909811-85909933
64251 chr1 215777626 215777626 1 + G C BLCA 215777635 + 215777615 215777655 41 TCATGCTATCAGAGAAGCATCTTGTATCAGGTAAAATGATT TCATGCTATCACAGAAGCATCTTGTATCAGGTAAAATGATT < 41bp 1 0.167841825934462 1 0.0778402388095856 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215777635 chr1:215777626 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_15474 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:215777613-215777644
64251 chr19 36223364 36223364 1 + G C BLCA 36223344 + 36223324 36223364 41 GGCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCTGAAG GGCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCTGAAC < 41bp 1 0.042857418191085 1 0.0673614740371704 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36223344 chr19:36223364 nonsynonymous SNV 0.998 4 41 hm5C_associated_SNPs_15475 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36223340-36223364
64251 chr17 43226866 43226866 1 + C G BLCA 43226860 + 43226840 43226880 41 GACGACTCGTCCGCTGGCGGCGACTTCCCGCCGCCGGCAGA GACGACTCGTCCGCTGGCGGCGACTTGCCGCCGCCGGCAGA < 41bp 1 0.4958991290867 1 0.14889121055603 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226860 chr17:43226866 nonsynonymous SNV 0.040 0 27 hm5C_associated_SNPs_15477 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:43226866-43226867
64251 chr1 155279912 155279912 1 + G T BLCA 155279915 + 155279895 155279935 41 AAGCAGGATTTCGTTCAGCACTTCTCCCAGATCGTTAGGGT AAGCAGGATTTCGTTCATCACTTCTCCCAGATCGTTAGGGT < 41bp 1 0.207910573104959 1 0.333400666713715 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279915 chr1:155279912 nonsynonymous SNV 0.989 0 18 hm5C_associated_SNPs_15478 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:155279853-155279925
64251 chr12 21598305 21598305 1 + G C BLCA 21598304 + 21598284 21598324 41 TCTAAAATATTGGAAGAATTCGATGTTGAAGAACAATCAAG TCTAAAATATTGGAAGAATTCCATGTTGAAGAACAATCAAG < 41bp 1 0.320443844956283 1 0.357246696949005 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21598304 chr12:21598305 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_15480 0 0 2 FUS POSTAR2 SRX029328 chr12:21598296-21598324
64251 chr16 845804 845804 1 + C G BLCA 845820 + 845800 845840 41 TGCTCCTGGACATTCTTGCACCCAAGCTCCGCCCCGTGAGT TGCTGCTGGACATTCTTGCACCCAAGCTCCGCCCCGTGAGT < 41bp 1 0.2944730630746 1 0.0788703262805939 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845820 chr16:845804 synonymous SNV . 0 5 hm5C_associated_SNPs_15481 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:845788-845812
64251 chr3 127786429 127786429 1 + G C BLCA 127786410 + 127786390 127786430 41 ATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATTGA ATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATTCA < 41bp 1 0.251169408791153 1 0.295458137989044 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786410 chr3:127786429 nonsynonymous SNV 0.991 2 40 hm5C_associated_SNPs_15482 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:127786373-127786445
64251 chr14 53175509 53175509 1 + G C BLCA 53175498 + 53175478 53175518 41 CTAGTCATTGTTAAAGCTACCAATGGACCAAGATATGTTGT CTAGTCATTGTTAAAGCTACCAATGGACCAACATATGTTGT < 41bp 1 0.169527467789857 1 0.546840786933899 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53175498 chr14:53175509 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_15483 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:53175498-53175541
64251 chr14 23794476 23794476 1 + C T BLCA 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATTATG < 41bp 1 0.25431612156559 1 0.166892826557159 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794476 nonsynonymous SNV 0.996 2 38 hm5C_associated_SNPs_15484 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr14 23794476 23794476 1 + C T BLCA 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATTATGG < 41bp 1 0.411871005433116 1 0.403824627399445 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794476 nonsynonymous SNV 0.996 2 37 hm5C_associated_SNPs_15485 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr16 70562804 70562804 1 + C A BLCA 70562823 + 70562803 70562843 41 CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC CACGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC < 41bp 1 0.259436629445416 1 0.0870944261550903 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70562823 chr16:70562804 synonymous SNV . 0 2 hm5C_associated_SNPs_15487 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:70562780-70562820
64251 chr6 168352586 168352586 1 + C G BLCA 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA TCCTCGGGGGACAGTGTGTCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.196753505186611 1 0.386695384979248 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352586 nonsynonymous SNV 0.240 4 16 hm5C_associated_SNPs_15490 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr6 168352586 168352586 1 + C G BLCA 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTCGGGGGACAGTGTGTCCCCCGACCCGTGGAAGCGGGAC < 41bp 1 0.538454155842279 1 0.476460367441177 experiment 0.923091688315443 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352586 nonsynonymous SNV 0.240 4 15 hm5C_associated_SNPs_15491 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr6 168352586 168352586 1 + C G BLCA 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTCGGGGGACAGTGTGTCCCCCGACCCGTGGAAGCGGGACG < 41bp 1 0.0886385723880098 1 0.276725769042969 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352586 nonsynonymous SNV 0.240 4 14 hm5C_associated_SNPs_15492 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr9 140166660 140166660 1 + C G BLCA 140166668 + 140166648 140166688 41 TGGCTTCTTCCTCACCGCCTCTCCAAGGTAGGCCTGCTGGG TGGCTTCTTCCTGACCGCCTCTCCAAGGTAGGCCTGCTGGG < 41bp 1 0.728407787823797 1 0.957396626472473 experiment 0.543184424352405 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140166668 chr9:140166660 synonymous SNV . 0 13 hm5C_associated_SNPs_15494 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:140166651-140166674
64251 chr19 41925047 41925047 1 + G A BLCA 41925063 + 41925043 41925083 41 TGCTGATGTATCGGGACTACCCCCTGGAACTATTCATGGCC TGCTAATGTATCGGGACTACCCCCTGGAACTATTCATGGCC < 41bp 1 0.301412224698267 1 0.268359512090683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41925063 chr19:41925047 synonymous SNV . 0 5 hm5C_associated_SNPs_15495 0 0 3 RPS3 POSTAR2 ENCODE chr19:41925039-41925048
64251 chr19 41925047 41925047 1 + G A BLCA 41925064 + 41925044 41925084 41 GCTGATGTATCGGGACTACCCCCTGGAACTATTCATGGCCC GCTAATGTATCGGGACTACCCCCTGGAACTATTCATGGCCC < 41bp 1 0.476484652577377 1 0.450756669044495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41925064 chr19:41925047 synonymous SNV . 0 4 hm5C_associated_SNPs_15496 0 0 3 RPS3 POSTAR2 ENCODE chr19:41925039-41925048
64251 chr14 104037964 104037964 1 + C G BLCA 104037976 + 104037956 104037996 41 AAAGGTCTCAAGATTCTGCCCTCCAAGAAAGTCTTGCCATG AAAGGTCTGAAGATTCTGCCCTCCAAGAAAGTCTTGCCATG < 41bp 1 0.686436912309797 1 0.961793899536133 experiment 0.627126175380406 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74773;RNA-BisSeq;Huh7;Control APOPT1 ENSG00000256053;ENSG00000256500 CDS Human other chr14:104037976 chr14:104037964 stopgain 0.890 1 9 hm5C_associated_SNPs_15497 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:104037961-104037982
64251 chr5 154330479 154330479 1 + G C BLCA 154330472 + 154330452 154330492 41 AAATTGTTTATCCTCCACAACTGCCTGGAGAACCTCGGAGA AAATTGTTTATCCTCCACAACTGCCTGCAGAACCTCGGAGA < 41bp 1 0.441975385827165 1 0.0586500763893127 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330472 chr5:154330479 nonsynonymous SNV 0.998 1 28 hm5C_associated_SNPs_15499 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154330446-154330492
64251 chr11 65268881 65268881 1 + G A BLCA 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA GAGGTCTGTGAAAGAGATGTCCATTGGAGAAATGGCTGGTA < 41bp 1 0.158764764016538 1 0.256917715072632 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268881 . . 0 11 hm5C_associated_SNPs_15500 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65268874-65268902
64251 chr11 65268884 65268884 1 + G A BLCA 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA GAGGTCTGTGGAAAAGATGTCCATTGGAGAAATGGCTGGTA < 41bp 1 0.14560429484881 1 0.265716135501862 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268884 . . 0 14 hm5C_associated_SNPs_15501 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65268874-65268902
64251 chr2 127453717 127453717 1 + G A BLCA 127453726 + 127453706 127453746 41 GTACTTTATTTGAGGGACAACAGACTTCACTTCCCTGAATG GTACTTTATTTAAGGGACAACAGACTTCACTTCCCTGAATG < 41bp 1 0.406274423620833 1 0.723780632019043 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GYPC ENSG00000136732 CDS Human protein_coding chr2:127453726 chr2:127453717 synonymous SNV . 0 12 hm5C_associated_SNPs_15502 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:127453700-127453740
64251 chr17 38512341 38512341 1 + G A BLCA 38512361 + 38512341 38512381 41 GAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGG AAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGG < 41bp 1 0.32383899224941 1 0.703026175498962 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RARA ENSG00000131759 CDS Human protein_coding chr17:38512361 chr17:38512341 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_15503 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:38512323-38512384
64251 chr11 65269080 65269080 1 + G A BLCA 65269082 + 65269062 65269102 41 AGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAG AGATGCTATAGTACTATTAACAAACTGGGTTAGAGAAGGAG < 41bp 1 0.167589250699627 1 0.441261559724808 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269082 chr11:65269080 . . 0 19 hm5C_associated_SNPs_15504 0 0 122 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65269040-65269080
64251 chr11 65269080 65269080 1 + G A BLCA 65269086 + 65269066 65269106 41 GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTA GCTATAGTACTATTAACAAACTGGGTTAGAGAAGGAGTGTA < 41bp 1 0.72696961879336 1 0.421612441539764 experiment 0.546060762413281 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269086 chr11:65269080 . . 0 15 hm5C_associated_SNPs_15505 0 0 122 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65269040-65269080
64251 chr17 4905849 4905849 1 + C T BLCA 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCTTGGG < 41bp 1 0.483443248854293 1 0.583019435405731 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905849 synonymous SNV . 0 37 hm5C_associated_SNPs_15506 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4905841-4905872
64251 chr13 103298650 103298650 1 + G A BLCA 103298646 + 103298626 103298666 41 GTAGTTTCCTCATTACAGCCCAGTGAGTGCAAAAACAAAAC GTAGTTTCCTCATTACAGCCCAGTAAGTGCAAAAACAAAAC < 41bp 1 0.175621416866025 1 0.133042424917221 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103298646 chr13:103298650 synonymous SNV . 0 25 hm5C_associated_SNPs_15507 0 0 4 SF3A3 POSTAR2 ENCODE chr13:103298618-103298678
64251 chr11 65268871 65268871 1 + G A BLCA 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA AAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA < 41bp 1 0.165851708846262 1 0.381710886955261 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268871 . . 0 1 hm5C_associated_SNPs_15508 0 0 126 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65268840-65268880
64251 chr3 186302239 186302239 1 + G C BLCA 186302256 + 186302236 186302276 41 TAAGATCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGG TAACATCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGG < 41bp 1 0.307035046579803 1 0.524138033390045 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302256 chr3:186302239 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_15510 0 0 11 LIN28A POSTAR2 GSE39873,GSM980593 chr3:186302220-186302240
64251 chr11 64950979 64950979 1 + C T BLCA 64950967 + 64950947 64950987 41 GACTGCTGGCTCTTGGCGGCCATCGCCTCCCTCACTCTCAA GACTGCTGGCTCTTGGCGGCCATCGCCTCCCTTACTCTCAA < 41bp 1 0.223468388105911 1 0.149765521287918 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950967 chr11:64950979 synonymous SNV . 0 33 hm5C_associated_SNPs_15511 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:64950978-64950979
64251 chr19 2794815 2794815 1 + C T BLCA 2794811 + 2794791 2794831 41 CATGTTTCCCCCTCCAAGGACATCCGGACAGCCAGCACAGA CATGTTTCCCCCTCCAAGGACATCTGGACAGCCAGCACAGA < 41bp 1 0.0783998738213751 1 0.414427161216736 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THOP1 ENSG00000172009 CDS Human protein_coding chr19:2794811 chr19:2794815 nonsynonymous SNV 0.030 4 25 hm5C_associated_SNPs_15512 0 0 9 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:2794779-2794821
64251 chr11 67052440 67052440 1 + G A BLCA 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCCCAACCGCCTCGAGTGGCGGGGCAAGGGCGAGGCCCCG < 41bp 1 0.744459537029383 1 0.940813064575195 experiment 0.511080925941234 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052440 nonsynonymous SNV 0.970 1 27 hm5C_associated_SNPs_15513 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052440 67052440 1 + G A BLCA 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCGAGTGGCGGGGCAAGGGCGAGGCCCCGGTAAG < 41bp 1 0.624000861558637 1 0.849875092506409 experiment 0.751998276882726 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052440 nonsynonymous SNV 0.970 1 22 hm5C_associated_SNPs_15514 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052440 67052440 1 + G A BLCA 67052450 + 67052430 67052470 41 GTGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG GTGGCGGGGCAAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG < 41bp 1 0.45895777666733 1 0.688251197338104 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052450 chr11:67052440 nonsynonymous SNV 0.970 1 11 hm5C_associated_SNPs_15515 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052440 67052440 1 + G A BLCA 67052451 + 67052431 67052471 41 TGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG TGGCGGGGCAAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG < 41bp 1 0.648046920984097 1 0.737037420272827 experiment 0.703906158031806 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052451 chr11:67052440 nonsynonymous SNV 0.970 1 10 hm5C_associated_SNPs_15516 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052440 67052440 1 + G A BLCA 67052452 + 67052432 67052472 41 GGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG GGCGGGGCAAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG < 41bp 1 0.415552290864663 1 0.623901665210724 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052452 chr11:67052440 nonsynonymous SNV 0.970 1 9 hm5C_associated_SNPs_15517 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052440 67052440 1 + G A BLCA 67052453 + 67052433 67052473 41 GCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG GCGGGGCAAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG < 41bp 1 0.738262166177123 1 0.476984739303589 experiment 0.523475667645753 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052453 chr11:67052440 nonsynonymous SNV 0.970 1 8 hm5C_associated_SNPs_15518 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr12 104340666 104340666 1 + G A BLCA 104340684 + 104340664 104340704 41 GAGATAGAATAGAAAGAATGCTTCGCCTCAGTTTGAACATT GAAATAGAATAGAAAGAATGCTTCGCCTCAGTTTGAACATT < 41bp 1 0.170977689419559 1 0.0928095877170563 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340684 chr12:104340666 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_15521 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104340656-104340696
64251 chr15 78841248 78841248 1 + G A BLCA 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCGTAAGAAGAAAGAAAAAGAA < 41bp 1 0.471634093732795 1 0.488796800374985 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841248 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_15522 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr5 86645051 86645051 1 + C G BLCA 86645061 + 86645041 86645081 41 CTGCAGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGCG CTGCAGTTTTGTTGTGAGGCCCTCAGATAATACTCCTGGCG < 41bp 1 0.157257564388578 1 0.0979334712028503 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RASA1 ENSG00000145715 CDS Human protein_coding chr5:86645061 chr5:86645051 nonsynonymous SNV 1.000 5 11 hm5C_associated_SNPs_15523 0 0 3 BUD13 POSTAR2 ENCODE chr5:86645011-86645070
64251 chr17 57918661 57918661 1 + G A BLCA 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGACTGTTAAATCTCATGGCAACACCAGTCGATGGGCTGT < 41bp 1 0.593473375049586 1 0.151158183813095 experiment 0.813053249900827 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918661 . . 0 10 hm5C_associated_SNPs_15524 0 0 34 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57918633-57918664
64251 chr17 57918661 57918661 1 + G A BLCA 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG ACTGTTAAATCTCATGGCAACACCAGTCGATGGGCTGTCTG < 41bp 1 0.799505823067076 1 0.322165846824646 experiment 0.400988353865848 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918661 . . 0 7 hm5C_associated_SNPs_15525 0 0 34 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57918633-57918664
64251 chr2 27662642 27662642 1 + C G BLCA 27662638 + 27662618 27662658 41 TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGCCTGCAGTC TGTTTCCTTTTCTAGGAGTTCATTGAAAAGTGCCTGCAGTC < 41bp 1 0.164463312490795 1 0.0877741575241089 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27662638 chr2:27662642 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_15526 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:27662641-27662642
64251 chr9 134067676 134067676 1 + C T BLCA 134067670 + 134067650 134067690 41 CAGCAAGCCTTTCTCATTTTCTCCATCAGGGTCAGTAATGA CAGCAAGCCTTTCTCATTTTCTCCATTAGGGTCAGTAATGA < 41bp 1 0.582328898302745 1 0.969248294830322 experiment 0.835342203394509 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134067670 chr9:134067676 nonsynonymous SNV 0.950 0 27 hm5C_associated_SNPs_15527 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:134067636-134067684
64251 chr17 54912463 54912463 1 + G C BLCA 54912447 + 54912427 54912467 41 GGGCTCCGCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAA GGGCTCCGCGTGGACGAGGGCTGCCTCAGGAAGGCCCACAA < 41bp 1 0.651458882063257 1 0.229596585035324 experiment 0.697082235873486 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912447 chr17:54912463 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_15528 0 0 1 ZNF622 POSTAR2 ENCODE chr17:54912463-54912564
64251 chr17 78704387 78704387 1 + A G BLCA 78704396 + 78704376 78704416 41 TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGC TCCCTCTGTCCGTATATGACCTGCAGACGTGGATGGGCAGC < 41bp 1 0.525557317707267 1 0.18274262547493 experiment 0.948885364585466 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPTOR ENSG00000141564 CDS Human protein_coding chr17:78704396 chr17:78704387 nonsynonymous SNV 0.997 0 12 hm5C_associated_SNPs_15529 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:78704387-78704388
64251 chr3 57543322 57543322 1 + G C BLCA 57543327 + 57543307 57543347 41 TTCTACGAAGCCCTCGAGTCCGACCCACTTCACAAAGAACT TTCTACGAAGCCCTCCAGTCCGACCCACTTCACAAAGAACT < 41bp 1 0.107641685600583 1 0.101626485586166 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDE12 ENSG00000174840 CDS Human protein_coding chr3:57543327 chr3:57543322 nonsynonymous SNV 0.614 1 16 hm5C_associated_SNPs_15531 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:57543307-57543329
64251 chr1 12009946 12009946 1 + C T BLCA 12009955 + 12009935 12009975 41 GAGGATCTGGTCATTCTCTTCGCAGACAGGTAGGTGGGTCA GAGGATCTGGTTATTCTCTTCGCAGACAGGTAGGTGGGTCA < 41bp 1 0.495380196274684 1 0.805894494056702 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009955 chr1:12009946 synonymous SNV . 0 12 hm5C_associated_SNPs_15532 0 0 3 DDX24 POSTAR2 ENCODE chr1:12009877-12009966
64251 chr1 12061836 12061836 1 + C T BLCA 12061838 + 12061818 12061858 41 CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTCAAGTGAGGA CCTCCTAGGGGGCGCTCTTGCAGAAGGCTTTCAAGTGAGGA < 41bp 1 0.759067503165485 1 0.733775019645691 experiment 0.48186499366903 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061838 chr1:12061836 synonymous SNV . 0 19 hm5C_associated_SNPs_15533 0 0 1 FXR2 POSTAR2 ENCODE chr1:12061825-12061840
64251 chr12 49888605 49888605 1 + C G BLCA 49888623 + 49888603 49888643 41 TTCAAGAGGAACAGTCTGCGCCTTCCTCAGAGAAAGGTGGT TTGAAGAGGAACAGTCTGCGCCTTCCTCAGAGAAAGGTGGT < 41bp 1 0.0127921312615914 1 0.140361249446869 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888623 chr12:49888605 nonsynonymous SNV 0.822 0 3 hm5C_associated_SNPs_15534 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:49888581-49888610
64251 chr7 98563392 98563392 1 + G A BLCA 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATGAGCATGGAGATGCGAAAGAACTT < 41bp 1 0.182403851423112 1 0.551432907581329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563392 synonymous SNV . 0 33 hm5C_associated_SNPs_15537 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917662 chr7:98563380-98563400
64251 chr5 14498739 14498739 1 + G C BLCA 14498746 + 14498726 14498766 41 CGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG CGTCGGCCAGCCTCAGGGTCCTAGGTAAGCACCGTGCAACG < 41bp 1 0.390747311952633 1 0.166970580816269 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14498746 chr5:14498739 synonymous SNV . 0 14 hm5C_associated_SNPs_15538 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14498717-14498739
64251 chr7 23235486 23235486 1 + G C BLCA 23235473 + 23235453 23235493 41 TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGCTTG TTCAGGTTTTACAGACATTTCACCAGAGGAATTCAGGCTTG < 41bp 1 0.748384259040454 1 0.709267973899841 experiment 0.503231481919092 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235473 chr7:23235486 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_15539 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23235463-23235520
64251 chr14 73637515 73637515 1 + G C BLCA 73637529 + 73637509 73637549 41 ACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT ACAATACAGAACGGCAGGAGCACAACGACAGACGGAGCCTT < 41bp 1 0.639249167422172 1 0.27521887421608 experiment 0.721501665155656 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637529 chr14:73637515 nonsynonymous SNV 0.557 1 7 hm5C_associated_SNPs_15540 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr14 73637515 73637515 1 + G C BLCA 73637531 + 73637511 73637551 41 AATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG AATACAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG < 41bp 1 0.584838570105304 1 0.195853888988495 experiment 0.830322859789393 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637531 chr14:73637515 nonsynonymous SNV 0.557 1 5 hm5C_associated_SNPs_15541 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr1 35824634 35824634 1 + C T BLCA 35824625 + 35824605 35824645 41 AATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATG AATGCCGAATCAAACAGGATCTGAAAATTTATTGCTGGATG < 41bp 1 0.406523727058917 1 0.353192090988159 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824625 chr1:35824634 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_15542 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:35824599-35824646
64251 chr22 32174116 32174116 1 + G A BLCA 32174133 + 32174113 32174153 41 AATGAGAAGGTCATGTGTGGCTACATCAGTGAAGATACCAG AATAAGAAGGTCATGTGTGGCTACATCAGTGAAGATACCAG < 41bp 1 0.490748745380194 1 0.838034749031067 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32174133 chr22:32174116 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_15543 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:32174112-32174144
64251 chr17 37618889 37618889 1 + G A BLCA 37618875 + 37618855 37618895 41 CAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGGAGCTGA CAAGCTCCACAAGGAGAAGACCAGGAAAGAACGGAAGCTGA < 41bp 1 0.362977529681704 1 0.304098010063171 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37618875 chr17:37618889 nonsynonymous SNV 0.838 4 35 hm5C_associated_SNPs_15544 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:37618855-37618893
64251 chr11 68363617 68363617 1 + G A BLCA 68363598 + 68363578 68363618 41 GACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAGC GACAGTGAGGAAAGTACAGACTCTGAAGAAGAAGATGGAAC < 41bp 1 0.403468106643184 1 0.443053632974625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363598 chr11:68363617 nonsynonymous SNV 0.996 0 40 hm5C_associated_SNPs_15545 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:68363576-68363618
64251 chr2 113315529 113315529 1 + G C BLCA 113315541 + 113315521 113315561 41 TAGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTCCATG TAGCTTTTCATAAGAAGGCTCAGAAGACCAGTGTTTCCATG < 41bp 1 0.407748902324987 1 0.319472014904022 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113315541 chr2:113315529 nonsynonymous SNV 0.989 2 9 hm5C_associated_SNPs_15547 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr2:113315520-113315541
64251 chr10 5955750 5955750 1 + A T BLCA 5955758 + 5955738 5955778 41 TATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAGTTAA TATCTTCAGGAGTATTCCTGCACTCAGGCCACAAAAGTTAA < 41bp 1 0.0685376347393108 1 0.0523222982883453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5955758 chr10:5955750 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_15548 0 0 2 SMNDC1 POSTAR2 ENCODE chr10:5955700-5955803
64251 chr7 114655760 114655760 1 + T C BLCA 114655752 + 114655732 114655772 41 GAAAATGAAGATTGTTGTGTCCACTGTATCCTGGCTTGCTT GAAAATGAAGATTGTTGTGTCCACTGTACCCTGGCTTGCTT < 41bp 1 0.199328352580579 1 0.0478044748306274 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655752 chr7:114655760 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_15554 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr7 114655760 114655760 1 + T C BLCA 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTACCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG < 41bp 1 0.795404921735795 1 0.35045200586319 experiment 0.40919015652841 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655760 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_15555 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr1 160323984 160323984 1 + C T BLCA 160323975 + 160323955 160323995 41 TGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC TGCTGTCATCCTCAGGAGGCCAAATCAGTTCCAGCCTCTCC < 41bp 1 0.231597617211843 1 0.11955389380455 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323975 chr1:160323984 nonsynonymous SNV 0.992 1 30 hm5C_associated_SNPs_15556 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:160323959-160323988
64251 chr2 64112904 64112904 1 + G C BLCA 64112920 + 64112900 64112940 41 CATAGATAATCTGGGTGCCACAGTGGATCTGTATATTCTTA CATACATAATCTGGGTGCCACAGTGGATCTGTATATTCTTA < 41bp 1 0.341590785138697 1 0.674375236034393 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UGP2 ENSG00000169764 CDS Human protein_coding chr2:64112920 chr2:64112904 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_15557 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:64112886-64112926
64251 chr9 110086268 110086268 1 + G C BLCA 110086266 + 110086246 110086286 41 TGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCT TGCTTCCAGCGTTACTACAGCACATAGGTCGAGAGAATCCT < 41bp 1 0.211119535631809 1 0.0608995258808136 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110086266 chr9:110086268 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_15559 0 0 15 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:110086219-110086278
64251 chr12 53858606 53858606 1 + C T BLCA 53858610 + 53858590 53858630 41 CCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCT CCCCGTCCATGTGCCTTAACCCTGACCTGGAGGGACCACCT < 41bp 1 0.654134391374141 1 0.171458125114441 experiment 0.691731217251717 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53858610 chr12:53858606 synonymous SNV . 0 17 hm5C_associated_SNPs_15560 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:53858561-53858609
64251 chr4 54257217 54257217 1 + G C BLCA 54257222 + 54257202 54257242 41 TATGGGTTTAATGAAGATACCTGGAAAGCTTACTGTGAAAA TATGGGTTTAATGAACATACCTGGAAAGCTTACTGTGAAAA < 41bp 1 0.700257677903558 1 0.354367613792419 experiment 0.599484644192884 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257222 chr4:54257217 nonsynonymous SNV 0.998 4 16 hm5C_associated_SNPs_15561 0 0 11 U2AF2 POSTAR2 GSE83923,CSM2221659 chr4:54257200-54257220
64251 chr11 67052451 67052451 1 + C T BLCA 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCTCCG < 41bp 1 0.720188511821375 1 0.914176404476166 experiment 0.559622976357249 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052451 synonymous SNV . 0 38 hm5C_associated_SNPs_15562 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052451 67052451 1 + C T BLCA 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCTCCGGTAAG < 41bp 1 0.670555433732721 1 0.80268657207489 experiment 0.658889132534558 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052451 synonymous SNV . 0 33 hm5C_associated_SNPs_15563 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052451 67052451 1 + C T BLCA 67052450 + 67052430 67052470 41 GTGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG GTGGCGGGGCGAGGGCGAGGCTCCGGTAAGGAGCCCGTGCG < 41bp 1 0.721759811116107 1 0.908690333366394 experiment 0.556480377767786 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052450 chr11:67052451 synonymous SNV . 0 22 hm5C_associated_SNPs_15564 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052451 67052451 1 + C T BLCA 67052452 + 67052432 67052472 41 GGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG GGCGGGGCGAGGGCGAGGCTCCGGTAAGGAGCCCGTGCGGG < 41bp 1 0.556236450795583 1 0.640161693096161 experiment 0.887527098408834 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052452 chr11:67052451 synonymous SNV . 0 20 hm5C_associated_SNPs_15565 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052451 67052451 1 + C T BLCA 67052453 + 67052433 67052473 41 GCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG GCGGGGCGAGGGCGAGGCTCCGGTAAGGAGCCCGTGCGGGG < 41bp 1 0.753947040708461 1 0.647568106651306 experiment 0.492105918583078 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052453 chr11:67052451 synonymous SNV . 0 19 hm5C_associated_SNPs_15566 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr4 1730407 1730407 1 + C T BLCA 1730416 + 1730396 1730436 41 AAGTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAGCCCTGA AAGTCTGGTTGTAGTGAGGCCCAGCCCCCAGAAAGCCCTGA < 41bp 1 0.0779364396215219 1 0.22842401266098 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730416 chr4:1730407 synonymous SNV . 0 12 hm5C_associated_SNPs_15567 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:1730337-1730428
64251 chr6 20402595 20402595 1 + C T BLCA 20402600 + 20402580 20402620 41 AGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCG AGCCAGCCCCGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCG < 41bp 1 0.384363392012417 1 0.579161584377289 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402600 chr6:20402595 synonymous SNV . 0 16 hm5C_associated_SNPs_15570 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402601 + 20402581 20402621 41 GCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGC GCCAGCCCCGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGC < 41bp 1 0.796288361990056 1 0.887285530567169 experiment 0.407423276019888 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402601 chr6:20402595 synonymous SNV . 0 15 hm5C_associated_SNPs_15571 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402603 + 20402583 20402623 41 CAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCC CAGCCCCGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCC < 41bp 1 0.290506904843199 1 0.322458684444427 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402603 chr6:20402595 synonymous SNV . 0 13 hm5C_associated_SNPs_15572 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402604 + 20402584 20402624 41 AGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCC AGCCCCGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCCC < 41bp 1 0.74127644849906 1 0.826182305812836 experiment 0.517447103001881 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402604 chr6:20402595 synonymous SNV . 0 12 hm5C_associated_SNPs_15573 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402606 + 20402586 20402626 41 CCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGG CCCCGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGG < 41bp 1 0.419917749222878 1 0.698865413665771 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402606 chr6:20402595 synonymous SNV . 0 10 hm5C_associated_SNPs_15574 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402609 + 20402589 20402629 41 CGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCG CGGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCG < 41bp 1 0.416498782488202 1 0.619051337242126 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402609 chr6:20402595 synonymous SNV . 0 7 hm5C_associated_SNPs_15575 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402610 + 20402590 20402630 41 GGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGC GGCTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGC < 41bp 1 0.581265894994887 1 0.700025618076324 experiment 0.837468210010227 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402610 chr6:20402595 synonymous SNV . 0 6 hm5C_associated_SNPs_15576 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402612 + 20402592 20402632 41 CTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGT CTTTGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGT < 41bp 1 0.620180556015338 1 0.433913975954056 experiment 0.759638887969325 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402612 chr6:20402595 synonymous SNV . 0 4 hm5C_associated_SNPs_15577 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr6 20402595 20402595 1 + C T BLCA 20402615 + 20402595 20402635 41 CGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACA TGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACA < 41bp 1 0.269221316821833 1 0.638848066329956 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402615 chr6:20402595 synonymous SNV . 0 1 hm5C_associated_SNPs_15578 0 0 1 XRN2 POSTAR2 ENCODE chr6:20402575-20402622
64251 chr16 56501895 56501895 1 + G A BLCA 56501910 + 56501890 56501930 41 TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG TTGAAAAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG < 41bp 1 0.579520476180948 1 0.921625137329102 experiment 0.840959047638103 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56501910 chr16:56501895 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_15579 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:56501831-56501907
64251 chr1 46295205 46295205 1 + G C BLCA 46295193 + 46295173 46295213 41 TCGTCAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCA TCGTCAGGAGAAGCATCAAACCTGGTTCGAATCAGAAACCA < 41bp 1 0.344404828387794 1 0.262414336204529 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAST2 ENSG00000086015 CDS Human protein_coding chr1:46295193 chr1:46295205 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_15580 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:46295190-46295220
64251 chr9 131198051 131198051 1 + C A BLCA 131198054 + 131198034 131198074 41 CAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCG CAGTGACACGGAGACATACTCTCCATGGGATGATGACAGCG < 41bp 1 0.77295906895077 1 0.944164991378784 experiment 0.454081862098461 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198054 chr9:131198051 nonsynonymous SNV 0.986 5 18 hm5C_associated_SNPs_15586 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr10 75519926 75519926 1 + C G BLCA 75519908 + 75519888 75519928 41 GATCCAGACTCCCCAGCGATCTGCCCCATCACAGGCCTCCA GATCCAGACTCCCCAGCGATCTGCCCCATCACAGGCCTGCA < 41bp 1 0.392627986397744 1 0.597767055034637 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519908 chr10:75519926 nonsynonymous SNV 0.990 2 39 hm5C_associated_SNPs_15589 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75519919-75519957
64251 chr16 2569581 2569581 1 + G C BLCA 2569563 + 2569543 2569583 41 AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAG AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTCAG < 41bp 1 0.506777224678658 1 0.758703708648682 experiment 0.986445550642684 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569563 chr16:2569581 synonymous SNV . 0 39 hm5C_associated_SNPs_15590 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2569571-2569611
64251 chr2 27900720 27900720 1 + G A BLCA 27900703 + 27900683 27900723 41 TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAGG TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTAAGG < 41bp 1 0.266867632249152 1 0.289260387420654 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900703 chr2:27900720 synonymous SNV . 0 38 hm5C_associated_SNPs_15592 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27900681-27900730
64251 chr9 131843433 131843433 1 + C G BLCA 131843453 + 131843433 131843473 41 CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC GGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC < 41bp 1 0.383712918081589 1 0.396412432193756 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843453 chr9:131843433 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_15593 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr1 173819576 173819576 1 + G T BLCA 173819569 + 173819549 173819589 41 TTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCT TTAATCAGACTAATGGAGACCCAAGAGTAAGATGTGGTCCT < 41bp 1 0.155609342828337 1 0.400836795568466 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DARS2 ENSG00000117593 CDS Human protein_coding chr1:173819569 chr1:173819576 stopgain 0.905 0 28 hm5C_associated_SNPs_15594 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173819528-173819588
64251 chr3 183435476 183435476 1 + C G BLCA 183435490 + 183435470 183435510 41 TATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG TATTATGAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG < 41bp 1 0.0619390023721982 1 0.0602583289146423 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183435490 chr3:183435476 nonsynonymous SNV 0.992 4 7 hm5C_associated_SNPs_15595 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183435441-183435528
64251 chr16 30779606 30779606 1 + G A BLCA 30779624 + 30779604 30779644 41 AAGAAGGAGGAGCTGGTCCCCTCTGAAGAGGACTTCCAGGG AAAAAGGAGGAGCTGGTCCCCTCTGAAGAGGACTTCCAGGG < 41bp 1 0.482644732976707 1 0.559867799282074 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779624 chr16:30779606 synonymous SNV . 0 3 hm5C_associated_SNPs_15596 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30779599-30779631
64251 chr6 53785424 53785424 1 + G A BLCA 53785428 + 53785408 53785448 41 TCTTTGTCACTGCAGAGAATCTGCCTCGCTGTGGTGCACTG TCTTTGTCACTGCAGAAAATCTGCCTCGCTGTGGTGCACTG < 41bp 1 0.528792173048753 1 0.158787965774536 experiment 0.942415653902494 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53785428 chr6:53785424 synonymous SNV . 0 17 hm5C_associated_SNPs_15597 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:53785424-53785444
64251 chr1 233482330 233482330 1 + C G BLCA 233482335 + 233482315 233482355 41 GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAA GGCCCCCGAAGTGATGAAGTCTTCCTTGTTTTCTAAGGGAA < 41bp 1 0.163812621844392 1 0.0660922825336456 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482335 chr1:233482330 nonsynonymous SNV 0.998 5 16 hm5C_associated_SNPs_15599 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233482327-233482358
64251 chr6 35392262 35392262 1 + G A BLCA 35392256 + 35392236 35392276 41 CAGTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGC CAGTGGAGACCGTGCGGGAGCTCACTAAGTTCGCCAAGAGC < 41bp 1 0.222933929004355 1 0.113786220550537 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392256 chr6:35392262 nonsynonymous SNV 0.730 3 27 hm5C_associated_SNPs_15600 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35392262 35392262 1 + G A BLCA 35392258 + 35392238 35392278 41 GTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGCAT GTGGAGACCGTGCGGGAGCTCACTAAGTTCGCCAAGAGCAT < 41bp 1 0.634866236287614 1 0.222285211086273 experiment 0.730267527424772 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392258 chr6:35392262 nonsynonymous SNV 0.730 3 25 hm5C_associated_SNPs_15601 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr2 219679356 219679356 1 + G C BLCA 219679360 + 219679340 219679380 41 CCCCACCGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG CCCCACCGCTGGCTGACAAACAGCCAGCCTGCTACCCCCAG < 41bp 1 0.508308983732932 1 0.371563732624054 experiment 0.983382032534135 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679360 chr2:219679356 nonsynonymous SNV 0.095 3 17 hm5C_associated_SNPs_15602 0 0 3 LARP4 POSTAR2 ENCODE chr2:219679282-219679358
64251 chr20 42249548 42249548 1 + G A BLCA 42249532 + 42249512 42249552 41 TGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGC TGGCTCACGACAGGAGACATCCACCTAAACCAGATTAATGC < 41bp 1 0.124722943253865 1 0.0853811204433441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT52 ENSG00000101052 CDS Human protein_coding chr20:42249532 chr20:42249548 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_15603 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42249538-42249565
64251 chr2 224824694 224824694 1 + C A BLCA 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGGAGCCCTGTTACAGAGCAGTGGACATGAGAGGACTGC < 41bp 1 0.522408852269318 1 0.269810020923615 experiment 0.955182295461363 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824694 nonsynonymous SNV 0.981 2 29 hm5C_associated_SNPs_15604 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:224824661-224824704
64251 chr11 9597639 9597639 1 + G C BLCA 9597628 + 9597608 9597648 41 GTGTCGTCGTAGAAAGAGAACGTATTGGAATGAGTAAGTCG GTGTCGTCGTAGAAAGAGAACGTATTGGAATCAGTAAGTCG < 41bp 1 0.0730052980301471 1 0.0923528075218201 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9597628 chr11:9597639 nonsynonymous SNV 0.994 2 32 hm5C_associated_SNPs_15606 0 0 7 GPKOW POSTAR2 ENCODE chr11:9597580-9597651
64251 chr19 56172438 56172438 1 + C T BLCA 56172435 + 56172415 56172455 41 ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG ATTCCAGCCACTGCTCTTCTCCCTACCATGACCCCTGACGG < 41bp 1 0.385846369411321 1 0.417290925979614 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172435 chr19:56172438 synonymous SNV . 0 24 hm5C_associated_SNPs_15613 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr19 56172438 56172438 1 + C T BLCA 56172437 + 56172417 56172457 41 TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC TCCAGCCACTGCTCTTCTCCCTACCATGACCCCTGACGGTC < 41bp 1 0.385147590135088 1 0.108659416437149 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172437 chr19:56172438 synonymous SNV . 0 22 hm5C_associated_SNPs_15614 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr12 53663738 53663738 1 + G A BLCA 53663747 + 53663727 53663767 41 GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCTG GGGCATTGTATAAGAGCTGCCAGTTCTTCCTTTCAGGCCTG < 41bp 1 0.158155715380464 1 0.379389464855194 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663747 chr12:53663738 nonsynonymous SNV 0.598 2 12 hm5C_associated_SNPs_15615 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:53663720-53663740
64251 chr6 44197442 44197442 1 + C T BLCA 44197431 + 44197411 44197451 41 CTGCAGCACCCTTGCCTGAGCGGAACTCTCTCAGTGCCATC CTGCAGCACCCTTGCCTGAGCGGAACTCTCTTAGTGCCATC < 41bp 1 0.760370896606664 1 0.298470318317413 experiment 0.479258206786673 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197431 chr6:44197442 synonymous SNV . 0 32 hm5C_associated_SNPs_15616 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44197433-44197464
64251 chr8 37630287 37630287 1 + T G BLCA 37630300 + 37630280 37630320 41 CAATCTCTTCATGCTGGAAACAGTGGATTCTGTGAAGTTGG CAATCTCGTCATGCTGGAAACAGTGGATTCTGTGAAGTTGG < 41bp 1 0.448649620252033 1 0.322691172361374 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPBP ENSG00000147471 CDS Human protein_coding chr8:37630300 chr8:37630287 nonsynonymous SNV 0.998 0 8 hm5C_associated_SNPs_15617 0 0 1 YBX3 POSTAR2 ENCODE chr8:37630279-37630302
64251 chr4 41262687 41262687 1 + G C BLCA 41262672 + 41262652 41262692 41 TTACATTCGCAGCATGAGAACTTCAGGAAAAAGCAGATTGA TTACATTCGCAGCATGAGAACTTCAGGAAAAAGCACATTGA < 41bp 1 0.382234360361059 1 0.250367403030396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41262672 chr4:41262687 nonsynonymous SNV 0.954 4 36 hm5C_associated_SNPs_15620 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:41262687-41262711
64251 chr3 52233298 52233298 1 + T G BLCA 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGG < 41bp 1 0.36767548914495 1 0.256709605455399 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233298 nonsynonymous SNV 0.963 2 41 hm5C_associated_SNPs_15621 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:52233245-52233314
64251 chr7 99123756 99123756 1 + C T BLCA 99123761 + 99123741 99123781 41 AACTTTATTCAGCATCGGCGCATCCACACTGGAGAAAAACC AACTTTATTCAGCATTGGCGCATCCACACTGGAGAAAAACC < 41bp 1 0.0304380228227146 1 0.109167128801346 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123761 chr7:99123756 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_15622 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:99123740-99123760
64251 chr1 203276346 203276346 1 + G A BLCA 203276335 + 203276315 203276355 41 CCCATCATCAGCAGGGTGGCCAGCCAGATCGGACTCAGCCA CCCATCATCAGCAGGGTGGCCAGCCAGATCGAACTCAGCCA < 41bp 1 0.454560249239918 1 0.164541184902191 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276335 chr1:203276346 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_15630 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:203276345-203276346
64251 chr11 68363635 68363635 1 + G A BLCA 68363639 + 68363619 68363659 41 AAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGG AAAGCAAGACTTGTTTAAACCCAGCAGTGCCAACACGGAGG < 41bp 1 0.281769292236855 1 0.318532079458237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363639 chr11:68363635 nonsynonymous SNV 0.904 0 17 hm5C_associated_SNPs_15631 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:68363580-68363661
64251 chr15 41865267 41865267 1 + C T BLCA 41865260 + 41865240 41865280 41 TTGCCTGCGGCATGGAGTACCTGAGCTCTCGGAACTTCATC TTGCCTGCGGCATGGAGTACCTGAGCTTTCGGAACTTCATC < 41bp 1 0.490514849040709 1 0.15782967209816 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41865260 chr15:41865267 nonsynonymous SNV 0.998 3 28 hm5C_associated_SNPs_15632 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:41865267-41865268
64251 chr9 33026956 33026956 1 + G A BLCA 33026973 + 33026953 33026993 41 TTGGAGGAGGAGGAAGGATGCAGAGAGAAAGGAGAGGTAAG TTGAAGGAGGAGGAAGGATGCAGAGAGAAAGGAGAGGTAAG < 41bp 1 0.650545885138641 1 0.81051504611969 experiment 0.698908229722718 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DNAJA1 ENSG00000086061 CDS Human protein_coding chr9:33026973 chr9:33026956 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_15633 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714641 chr9:33026934-33026979
64251 chr2 32640622 32640622 1 + G A BLCA 32640607 + 32640587 32640627 41 TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGAATCC TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTAAATCC < 41bp 1 0.107762506456281 1 0.503969788551331 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640607 chr2:32640622 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_15634 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32640588-32640622
64251 chr18 29171903 29171903 1 + G A BLCA 29171892 + 29171872 29171912 41 TCTCATCGTCTGCTCCTCCTCTGCCTTGCTGGACTGGTATT TCTCATCGTCTGCTCCTCCTCTGCCTTGCTGAACTGGTATT < 41bp 1 0.489400246165403 1 0.118999660015106 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTR ENSG00000118271 CDS Human protein_coding chr18:29171892 chr18:29171903 nonsynonymous SNV 0.992 3 32 hm5C_associated_SNPs_15641 0 0 6 DDX3X POSTAR2 ENCODE chr18:29171852-29171907
64251 chr17 16343359 16343359 1 + G A BLCA 16343379 + 16343359 16343399 41 GAAATCACTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC AAAATCACTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC < 41bp 1 0.0273362852111864 1 0.236116290092468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49A ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16343379 chr17:16343359 . . 0 1 hm5C_associated_SNPs_15642 0 0 97 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:16343340-16343360
64251 chr14 61285476 61285476 1 + C T BLCA 61285479 + 61285459 61285499 41 TTGCTCTGCTTTTGGCTCAGCATAAAGATAGATCTACCCAA TTGCTCTGCTTTTGGCTTAGCATAAAGATAGATCTACCCAA < 41bp 1 0.455865976283274 1 0.217152744531631 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61285479 chr14:61285476 stopgain 1.000 1 18 hm5C_associated_SNPs_15644 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:61285450-61285479
64251 chr12 120876184 120876184 1 + C G BLCA 120876203 + 120876183 120876223 41 TCGCATGTGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCG TGGCATGTGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCG < 41bp 1 0.086031256281793 1 0.0500719249248505 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX6A1 ENSG00000111775;ENSG00000111780 CDS Human other chr12:120876203 chr12:120876184 nonsynonymous SNV 0.990 1 2 hm5C_associated_SNPs_15646 0 0 33 TARDBP POSTAR2 DRA001158,DRS012387 chr12:120876179-120876205
64251 chr2 105959589 105959589 1 + C T BLCA 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTTAGGC < 41bp 1 0.441057569529572 1 0.479640066623688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959589 nonsynonymous SNV 0.691 0 37 hm5C_associated_SNPs_15649 0 0 2 UCHL5 POSTAR2 ENCODE chr2:105959589-105959683
64251 chr1 107600219 107600219 1 + G A BLCA 107600239 + 107600219 107600259 41 GACCTTCCCTGGAGGGGAGTCGGAGAAACCCCTGGTGCTGT AACCTTCCCTGGAGGGGAGTCGGAGAAACCCCTGGTGCTGT < 41bp 1 0.747499014837071 1 0.918962895870209 experiment 0.505001970325857 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600239 chr1:107600219 synonymous SNV . 0 1 hm5C_associated_SNPs_15650 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:107600218-107600219
64251 chr11 107968457 107968457 1 + C T BLCA 107968473 + 107968453 107968493 41 TTCTCAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA TTCTTAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA < 41bp 1 0.247137437060172 1 0.16225004196167 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968473 chr11:107968457 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_15651 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr9 131843464 131843464 1 + C T BLCA 131843453 + 131843433 131843473 41 CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC CGCTCCCCGCTTCATGGCGGCCGGTGACCCTTACCCACGTC < 41bp 1 0.369752628077139 1 0.608356654644012 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843453 chr9:131843464 synonymous SNV . 0 32 hm5C_associated_SNPs_15654 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr20 49195795 49195795 1 + G A BLCA 49195806 + 49195786 49195826 41 CAGACAGCCGACCAGCTGCGCTTCTCCTACCTGGCTGTGAT CAGACAGCCAACCAGCTGCGCTTCTCCTACCTGGCTGTGAT < 41bp 1 0.075402106496514 1 0.0422307550907135 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195806 chr20:49195795 nonsynonymous SNV 0.813 4 10 hm5C_associated_SNPs_15655 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:49195783-49195819
64251 chr5 141524185 141524185 1 + G C BLCA 141524180 + 141524160 141524200 41 TTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTC TTATCAATTATGCAAAAGTTCGGAACATGCCAGAAACTTTC < 41bp 1 0.747594070336729 1 0.698565542697906 experiment 0.504811859326542 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control NDFIP1 ENSG00000131507 CDS Human protein_coding chr5:141524180 chr5:141524185 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_15656 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr5:141524157-141524185
64251 chr6 30691799 30691799 1 + G A BLCA 30691780 + 30691760 30691800 41 CGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGGA CGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGAA < 41bp 1 0.381188650146231 1 0.0677885115146637 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691780 chr6:30691799 synonymous SNV . 0 40 hm5C_associated_SNPs_15657 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr6 30691799 30691799 1 + G A BLCA 30691787 + 30691767 30691807 41 TACCTCACCGTGGCTGCTGTCTTCCGTGGTCGGATGTCCAT TACCTCACCGTGGCTGCTGTCTTCCGTGGTCGAATGTCCAT < 41bp 1 0.248509835630678 1 0.100665003061295 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691787 chr6:30691799 synonymous SNV . 0 33 hm5C_associated_SNPs_15658 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr6 30691799 30691799 1 + G A BLCA 30691797 + 30691777 30691817 41 TGGCTGCTGTCTTCCGTGGTCGGATGTCCATGAAGGAGGTC TGGCTGCTGTCTTCCGTGGTCGAATGTCCATGAAGGAGGTC < 41bp 1 0.3480317634046 1 0.525515913963318 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30691797 chr6:30691799 synonymous SNV . 0 23 hm5C_associated_SNPs_15659 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30691749-30691842
64251 chr17 74554942 74554942 1 + G A BLCA 74554932 + 74554912 74554952 41 GGTATCTTTTGTGAGGAGGTCTGACTTGCTGAGGCTCAGCT GGTATCTTTTGTGAGGAGGTCTGACTTGCTAAGGCTCAGCT < 41bp 1 0.226548536582848 1 0.252847880125046 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554932 chr17:74554942 . . 0 31 hm5C_associated_SNPs_15660 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr17 74554942 74554942 1 + G A BLCA 74554936 + 74554916 74554956 41 TCTTTTGTGAGGAGGTCTGACTTGCTGAGGCTCAGCTGTTT TCTTTTGTGAGGAGGTCTGACTTGCTAAGGCTCAGCTGTTT < 41bp 1 0.240362682079557 1 0.0302753448486328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554936 chr17:74554942 . . 0 27 hm5C_associated_SNPs_15661 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr17 74554942 74554942 1 + G A BLCA 74554946 + 74554926 74554966 41 GGAGGTCTGACTTGCTGAGGCTCAGCTGTTTAATACAAATC GGAGGTCTGACTTGCTAAGGCTCAGCTGTTTAATACAAATC < 41bp 1 0.307416867568576 1 0.0960941016674042 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554946 chr17:74554942 . . 0 17 hm5C_associated_SNPs_15662 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr17 74554942 74554942 1 + G A BLCA 74554948 + 74554928 74554968 41 AGGTCTGACTTGCTGAGGCTCAGCTGTTTAATACAAATCTG AGGTCTGACTTGCTAAGGCTCAGCTGTTTAATACAAATCTG < 41bp 1 0.409176043083366 1 0.142599046230316 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554948 chr17:74554942 . . 0 15 hm5C_associated_SNPs_15663 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr12 108086623 108086623 1 + C G BLCA 108086612 + 108086592 108086632 41 TGCTGAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCT TGCTGAGACTCTTGGTGAATCTCTCTTGGGTGTTACGGTCT < 41bp 1 0.290726522198483 1 0.0710243880748749 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086612 chr12:108086623 nonsynonymous SNV 0.993 3 32 hm5C_associated_SNPs_15667 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr12 108086623 108086623 1 + C G BLCA 108086614 + 108086594 108086634 41 CTGAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTAC CTGAGACTCTTGGTGAATCTCTCTTGGGTGTTACGGTCTAC < 41bp 1 0.514860862986989 1 0.1542908847332 experiment 0.970278274026022 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086614 chr12:108086623 nonsynonymous SNV 0.993 3 30 hm5C_associated_SNPs_15668 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr12 108086623 108086623 1 + C G BLCA 108086616 + 108086596 108086636 41 GAGACTCTTGGTGAATCTCTCTTGGGTCTTACGGTCTACGG GAGACTCTTGGTGAATCTCTCTTGGGTGTTACGGTCTACGG < 41bp 1 0.760050943895334 1 0.364143550395966 experiment 0.479898112209333 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086616 chr12:108086623 nonsynonymous SNV 0.993 3 28 hm5C_associated_SNPs_15669 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr11 985542 985542 1 + G A BLCA 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCGAAGAATGCCATGCTCTTCGAGGCCATCAGCTTA < 41bp 1 0.0815644148643367 1 0.0834944248199463 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985542 nonsynonymous SNV 0.921 3 18 hm5C_associated_SNPs_15670 0 0 3 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr16 30941554 30941554 1 + C T BLCA 30941537 + 30941517 30941557 41 TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCGGG TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTTGGG < 41bp 1 0.396939458776108 1 0.835701763629913 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941537 chr16:30941554 nonsynonymous SNV 0.305 1 38 hm5C_associated_SNPs_15671 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30941518-30941558
64251 chr3 160122125 160122125 1 + G A BLCA 160122141 + 160122121 160122161 41 GGATGATTATGAAGTCATTCCTAACAGTAATTTCTATGTAT GGATAATTATGAAGTCATTCCTAACAGTAATTTCTATGTAT < 41bp 1 0.111115985521757 1 0.0568875074386597 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160122141 chr3:160122125 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_15672 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160122120-160122140
64251 chr6 42975942 42975942 1 + C T BLCA 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTTATCTACGAGACGGAGCATCACAACGGGATTGCTGAG < 41bp 1 0.287111793976404 1 0.0891509652137756 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975942 synonymous SNV . 0 5 hm5C_associated_SNPs_15673 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:42975932-42975953
64251 chr16 23700835 23700835 1 + C T BLCA 23700824 + 23700804 23700844 41 TTTTCATCCAGATCACCCTCCTTAAATATTTCCGCAATTAC TTTTCATCCAGATCACCCTCCTTAAATATTTTCGCAATTAC < 41bp 1 0.124146816606052 1 0.326046615839005 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700824 chr16:23700835 synonymous SNV . 0 32 hm5C_associated_SNPs_15675 0 0 20 CSTF2 POSTAR2 GSE40859,GSM1003588 chr16:23700814-23700835
64251 chr1 10231366 10231366 1 + G A BLCA 10231351 + 10231331 10231371 41 GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGC GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCAAAAGC < 41bp 1 0.212574145664583 1 0.182148396968842 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10231351 chr1:10231366 synonymous SNV . 0 36 hm5C_associated_SNPs_15677 0 0 4 FXR2 POSTAR2 ENCODE chr1:10231334-10231386
64251 chr18 13096282 13096282 1 + C T BLCA 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTGGCCAGCGCATTGCCTCACAGTCACGCTGCAGCATGGAT < 41bp 1 0.0894302610939849 1 0.0655702650547028 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096282 nonsynonymous SNV 0.647 4 30 hm5C_associated_SNPs_15678 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:13096271-13096295
64251 chr1 161173249 161173249 1 + G C BLCA 161173246 + 161173226 161173266 41 GAGGTGTTCGGCAGTGGCAGCCAGATGTGGAATGGGCACAG GAGGTGTTCGGCAGTGGCAGCCACATGTGGAATGGGCACAG < 41bp 1 0.580016423819097 1 0.224104970693588 experiment 0.839967152361806 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161173246 chr1:161173249 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_15680 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:161173223-161173249
64251 chr12 104340409 104340409 1 + C G BLCA 104340419 + 104340399 104340439 41 CTATGCGAGTCAGAAGAAAACATTTGAAATTAATCCCAGAC CTATGCGAGTGAGAAGAAAACATTTGAAATTAATCCCAGAC < 41bp 1 0.119554618540551 1 0.199996650218964 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340419 chr12:104340409 nonsynonymous SNV 0.986 2 11 hm5C_associated_SNPs_15681 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr12:104340397-104340459
64251 chr19 11553317 11553317 1 + G C BLCA 11553302 + 11553282 11553322 41 GAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAAGCT GAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCACAAGCT < 41bp 1 0.358948955893446 1 0.526552200317383 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553302 chr19:11553317 nonsynonymous SNV 0.999 0 36 hm5C_associated_SNPs_15682 0 0 18 BUD13 POSTAR2 ENCODE chr19:11553259-11553321
64251 chr19 11553317 11553317 1 + G C BLCA 11553314 + 11553294 11553334 41 AGAGAGGCCAAAGAGCAGCACCAGAAGCTGTGGGAAGGTAT AGAGAGGCCAAAGAGCAGCACCACAAGCTGTGGGAAGGTAT < 41bp 1 0.202457414927718 1 0.0786389112472534 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553314 chr19:11553317 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_15683 0 0 18 BUD13 POSTAR2 ENCODE chr19:11553259-11553321
64251 chr16 89759837 89759837 1 + C A BLCA 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTACCAGTA < 41bp 1 0.572962095573195 1 0.800567746162415 experiment 0.854075808853609 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759837 synonymous SNV . 0 35 hm5C_associated_SNPs_15684 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr4 146576334 146576334 1 + C T BLCA 146576316 + 146576296 146576336 41 TAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTC TAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATTTC < 41bp 1 0.529676725745971 1 0.0799096822738647 experiment 0.940646548508059 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MMAA ENSG00000151611 CDS Human protein_coding chr4:146576316 chr4:146576334 synonymous SNV . 0 39 hm5C_associated_SNPs_15686 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:146576314-146576338
64251 chr1 150325402 150325402 1 + G A BLCA 150325400 + 150325380 150325420 41 GCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTG GCATTTCAAAAAGCATGGGGCTAAACACTACTGGGACCTTG < 41bp 1 0.497609665659761 1 0.142583042383194 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150325400 chr1:150325402 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_15687 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150325341-150325471
64251 chr17 17701368 17701368 1 + C T BLCA 17701357 + 17701337 17701377 41 ACCCGGCCAACTTCAAGGACCTTGGGGACCTCTGTGGGCCC ACCCGGCCAACTTCAAGGACCTTGGGGACCTTTGTGGGCCC < 41bp 1 0.211489473780085 1 0.0958406329154968 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17701357 chr17:17701368 synonymous SNV . 0 32 hm5C_associated_SNPs_15688 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:17701318-17701369
64251 chr12 113596723 113596723 1 - C G BLCA 113596717 - 113596697 113596737 41 GCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG GCGCCTTCGGCCGGCGTGCCCGCTCCAAGAAGGGCAAGATG < 41bp 1 0.313339175618377 1 0.316582590341568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596717 chr12:113596723 nonsynonymous SNV 0.079 1 15 hm5C_associated_SNPs_15699 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr12 113596723 113596723 1 - C G BLCA 113596718 - 113596698 113596738 41 GGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT GGCGCCTTCGGCCGGCGTGCCCGCTCCAAGAAGGGCAAGAT < 41bp 1 0.195987296525724 1 0.235091298818588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596718 chr12:113596723 nonsynonymous SNV 0.079 1 16 hm5C_associated_SNPs_15700 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr12 113730855 113730855 1 + C G BLCA 113730854 + 113730834 113730874 41 GTCACCAGGCTGCTGGAGACCCTCTCCCAGATGGAGAGATA GTCACCAGGCTGCTGGAGACCGTCTCCCAGATGGAGAGATA < 41bp 1 0.255137055767654 1 0.0863112807273865 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113730854 chr12:113730855 nonsynonymous SNV 0.946 0 22 hm5C_associated_SNPs_15701 0 0 2 BUD13 POSTAR2 ENCODE chr12:113730797-113730856
64251 chr11 46400035 46400035 1 + G A BLCA 46400025 + 46400005 46400045 41 AGGTGAAGAGCTGATTGAGGCTGCCAAGAGGAACGACTTCT AGGTGAAGAGCTGATTGAGGCTGCCAAGAGAAACGACTTCT < 41bp 1 0.178429484108132 1 0.116234719753265 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46400025 chr11:46400035 synonymous SNV . 0 31 hm5C_associated_SNPs_15703 0 0 2 DDX24 POSTAR2 ENCODE chr11:46400006-46400066
64251 chr11 46400035 46400035 1 + G A BLCA 46400038 + 46400018 46400058 41 ATTGAGGCTGCCAAGAGGAACGACTTCTGTAAGGTACTAGC ATTGAGGCTGCCAAGAGAAACGACTTCTGTAAGGTACTAGC < 41bp 1 0.243984677539571 1 0.410293281078339 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46400038 chr11:46400035 synonymous SNV . 0 18 hm5C_associated_SNPs_15704 0 0 2 DDX24 POSTAR2 ENCODE chr11:46400006-46400066
64251 chr1 156756611 156756611 1 + C G BLCA 156756593 + 156756573 156756613 41 CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTGTG < 41bp 1 0.155763406989485 1 0.0970993340015411 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756593 chr1:156756611 nonsynonymous SNV 0.993 4 39 hm5C_associated_SNPs_15705 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:156756584-156756613
64251 chr1 156756611 156756611 1 + C G BLCA 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTGTGCTA < 41bp 1 0.214641749143701 1 0.27191424369812 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756611 nonsynonymous SNV 0.993 4 36 hm5C_associated_SNPs_15706 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:156756584-156756613
64251 chr20 31019208 31019208 1 + T G BLCA 31019221 + 31019201 31019241 41 GCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATCACA GCCCTGAGCAACTCTCGGACCTTCCATGCCTTACCATCACA < 41bp 1 0.0873086757131766 1 0.0894524157047272 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31019221 chr20:31019208 nonsynonymous SNV 0.999 4 8 hm5C_associated_SNPs_15707 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:31019178-31019214
64251 chr1 2160703 2160703 1 + C T BLCA 2160685 + 2160665 2160705 41 ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATCCT ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATTCT < 41bp 1 0.213180913049518 1 0.0214203298091888 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2160685 chr1:2160703 synonymous SNV . 0 39 hm5C_associated_SNPs_15708 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:2160653-2160721
64251 chr19 39109921 39109921 1 + G A BLCA 39109901 + 39109881 39109921 41 GCCCTGGTTGTGGAAGGCGACAGAAGTCATGGCGATGTTTG GCCCTGGTTGTGGAAGGCGACAGAAGTCATGGCGATGTTTA < 41bp 1 0.701082604006738 1 0.792171239852905 experiment 0.597834791986524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39109901 chr19:39109921 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_15710 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:39109820-39109940
64251 chr1 161284213 161284213 1 + G A BLCA 161284211 + 161284191 161284231 41 CCAAGATGGCTGCGCTGTTGCTGAGGTGACTTCAGTGGGAC CCAAGATGGCTGCGCTGTTGCTAAGGTGACTTCAGTGGGAC < 41bp 1 0.788396036781434 1 0.37651914358139 experiment 0.423207926437132 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SDHC ENSG00000143252 CDS Human protein_coding chr1:161284211 chr1:161284213 synonymous SNV . 0 23 hm5C_associated_SNPs_15712 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:161284191-161284238
64251 chr1 32782295 32782295 1 + G A BLCA 32782298 + 32782278 32782318 41 GCCAATGCTGAGGAGATGACCAAGTACCACAGCGATGACTA GCCAATGCTGAGGAGATAACCAAGTACCACAGCGATGACTA < 41bp 1 0.71037580012842 1 0.480706870555878 experiment 0.579248399743161 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32782298 chr1:32782295 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_15713 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32782280-32782300
64251 chr5 156786153 156786153 1 + C T BLCA 156786136 + 156786116 156786156 41 CTGTGGTCATGGAGGAACTGCTAAAGATTGTGAAGAGCTTG CTGTGGTCATGGAGGAACTGCTAAAGATTGTGAAGAGTTTG < 41bp 1 0.308195465641152 1 0.130009710788727 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156786136 chr5:156786153 synonymous SNV . 0 38 hm5C_associated_SNPs_15715 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:156786115-156786153
64251 chr6 31919363 31919363 1 + G A BLCA 31919375 + 31919355 31919395 41 GTTCACAAGAGAAGTCGTTTCATTCAAGTGAGTCCTCCCTT GTTCACAAAAGAAGTCGTTTCATTCAAGTGAGTCCTCCCTT < 41bp 1 0.0993140637933879 1 0.029966413974762 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31919375 chr6:31919363 synonymous SNV . 0 9 hm5C_associated_SNPs_15716 0 0 5 DDX55 POSTAR2 ENCODE chr6:31919331-31919368
64251 chr8 37914710 37914710 1 + G A BLCA 37914699 + 37914679 37914719 41 CCCACCATTCCGGGGGTCACCAGCCCTTCCAGTGATGAGCC CCCACCATTCCGGGGGTCACCAGCCCTTCCAATGATGAGCC < 41bp 1 0.53737319340988 1 0.62015438079834 experiment 0.92525361318024 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4EBP1 ENSG00000187840 CDS Human protein_coding chr8:37914699 chr8:37914710 nonsynonymous SNV 0.897 0 32 hm5C_associated_SNPs_15718 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:37914660-37914712
64251 chr16 23700964 23700964 1 + C T BLCA 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACCTTAGCAACGGCAGCGTGCAGATCAACTTCTTCCA < 41bp 1 0.215502027903276 1 0.206723898649216 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700964 synonymous SNV . 0 9 hm5C_associated_SNPs_15719 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23700913-23700979
64251 chr17 78022522 78022522 1 + G A BLCA 78022532 + 78022512 78022552 41 GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACC GGAAGCAGAAAACGAAGGGTCCCAGCTGGTGGTTTTGGACC < 41bp 1 0.215087196705432 1 0.222372621297836 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022532 chr17:78022522 nonsynonymous SNV 0.011 0 11 hm5C_associated_SNPs_15730 0 0 1 PPIG POSTAR2 ENCODE chr17:78022382-78022564
64251 chr10 105128238 105128238 1 + G T BLCA 105128225 + 105128205 105128245 41 CTCGGCCCCTGGCCCTGCGGCCCCCGACCCTCCGGGCACTG CTCGGCCCCTGGCCCTGCGGCCCCCGACCCTCCTGGCACTG < 41bp 1 0.2541975228452 1 0.0524328649044037 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128225 chr10:105128238 synonymous SNV . 0 34 hm5C_associated_SNPs_15731 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr10 105128238 105128238 1 + G T BLCA 105128226 + 105128206 105128246 41 TCGGCCCCTGGCCCTGCGGCCCCCGACCCTCCGGGCACTGG TCGGCCCCTGGCCCTGCGGCCCCCGACCCTCCTGGCACTGG < 41bp 1 0.489855585258335 1 0.157421350479126 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128226 chr10:105128238 synonymous SNV . 0 33 hm5C_associated_SNPs_15732 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr10 105128238 105128238 1 + G T BLCA 105128227 + 105128207 105128247 41 CGGCCCCTGGCCCTGCGGCCCCCGACCCTCCGGGCACTGGC CGGCCCCTGGCCCTGCGGCCCCCGACCCTCCTGGCACTGGC < 41bp 1 0.754647119206819 1 0.235506296157837 experiment 0.490705761586362 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128227 chr10:105128238 synonymous SNV . 0 32 hm5C_associated_SNPs_15733 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr10 105128238 105128238 1 + G T BLCA 105128228 + 105128208 105128248 41 GGCCCCTGGCCCTGCGGCCCCCGACCCTCCGGGCACTGGCG GGCCCCTGGCCCTGCGGCCCCCGACCCTCCTGGCACTGGCG < 41bp 1 0.237309062696234 1 0.22476053237915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128228 chr10:105128238 synonymous SNV . 0 31 hm5C_associated_SNPs_15734 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr10 105128238 105128238 1 + G T BLCA 105128258 + 105128238 105128278 41 GGGCACTGGCGCTTCGGGGGCCACGGTCGTCTCAGGTTCAG TGGCACTGGCGCTTCGGGGGCCACGGTCGTCTCAGGTTCAG < 41bp 1 0.520802831030553 1 0.335865199565887 experiment 0.958394337938893 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128258 chr10:105128238 synonymous SNV . 0 1 hm5C_associated_SNPs_15735 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr6 144613024 144613024 1 + T C BLCA 144613036 + 144613016 144613056 41 TTCAGTGATATCATTAAGTCCAGATCTGGTAGGTAAAGGAA TTCAGTGACATCATTAAGTCCAGATCTGGTAGGTAAAGGAA < 41bp 1 0.0589806355033869 1 0.309093296527863 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144613036 chr6:144613024 synonymous SNV . 0 9 hm5C_associated_SNPs_15739 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:144612999-144613027
64251 chr6 144613024 144613024 1 + T C BLCA 144613041 + 144613021 144613061 41 TGATATCATTAAGTCCAGATCTGGTAGGTAAAGGAAGCTCA TGACATCATTAAGTCCAGATCTGGTAGGTAAAGGAAGCTCA < 41bp 1 0.157520281903363 1 0.283302813768387 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144613041 chr6:144613024 synonymous SNV . 0 4 hm5C_associated_SNPs_15740 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:144612999-144613027
64251 chr4 144390270 144390270 1 + G C BLCA 144390263 + 144390243 144390283 41 TGACCAACAGAAGACCTTGGCTCTAAAGAGTACCCGGGAAG TGACCAACAGAAGACCTTGGCTCTAAACAGTACCCGGGAAG < 41bp 1 0.59209074486334 1 0.84088408946991 experiment 0.815818510273321 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144390263 chr4:144390270 nonsynonymous SNV 0.969 4 28 hm5C_associated_SNPs_15744 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:144390268-144390301
64251 chr9 37770008 37770008 1 + C G BLCA 37769995 + 37769975 37770015 41 CCTTGGAAACCCTTGTGTACCTGACTCCTGACTCAGAACAC CCTTGGAAACCCTTGTGTACCTGACTCCTGACTGAGAACAC < 41bp 1 0.421785815357069 1 0.0485954284667969 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37769995 chr9:37770008 stopgain 0.985 1 34 hm5C_associated_SNPs_15747 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37769941-37770016
64251 chr9 37770008 37770008 1 + C G BLCA 37770013 + 37769993 37770033 41 ACCTGACTCCTGACTCAGAACACGGTATGTAGTTGAATGCA ACCTGACTCCTGACTGAGAACACGGTATGTAGTTGAATGCA < 41bp 1 0.729556964557886 1 0.685704708099365 experiment 0.540886070884228 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37770013 chr9:37770008 stopgain 0.985 1 16 hm5C_associated_SNPs_15748 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37769941-37770016
64251 chr11 108196125 108196125 1 + G T BLCA 108196145 + 108196125 108196165 41 GAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCT TAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCT < 41bp 1 0.264489763720229 1 0.0708832442760468 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108196145 chr11:108196125 stopgain 1.000 1 1 hm5C_associated_SNPs_15749 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:108196106-108196130
64251 chr2 74756539 74756539 1 - C T BLCA 74756536 - 74756516 74756556 41 CTGCGCCTCTTTCTCGGGATCCACGTCTTCCTGGTCAGCTG CTGCGCCTCTTTCTCGGAATCCACGTCTTCCTGGTCAGCTG < 41bp 1 0.457905489670925 1 0.326033502817154 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AUP1 ENSG00000115307 CDS Human protein_coding chr2:74756536 chr2:74756539 synonymous SNV . 0 18 hm5C_associated_SNPs_15750 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:74756503-74756565
64251 chr9 137328325 137328325 1 + C G BLCA 137328316 + 137328296 137328336 41 AGACCTGTTCCCTGCAGGTTCGCTAAGCTCTTGCTCCGCCT AGACCTGTTCCCTGCAGGTTCGCTAAGCTGTTGCTCCGCCT < 41bp 1 0.373064987443207 1 0.0987880825996399 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137328316 chr9:137328325 synonymous SNV . 0 30 hm5C_associated_SNPs_15751 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:137328317-137328390
64251 chr4 79173586 79173586 1 + C G BLCA 79173606 + 79173586 79173626 41 CTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC GTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC < 41bp 1 0.220297432191602 1 0.576003849506378 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79173606 chr4:79173586 nonsynonymous SNV 0.761 4 1 hm5C_associated_SNPs_15752 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79173578-79173601
64251 chr22 31592944 31592944 1 + C G BLCA 31592933 + 31592913 31592953 41 CTGTTTCAGAGAGAAGACCCCTCCTCGTCCTCAAGGACAGA CTGTTTCAGAGAGAAGACCCCTCCTCGTCCTGAAGGACAGA < 41bp 1 0.137077278151231 1 0.207948625087738 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF185 ENSG00000138942 CDS Human protein_coding chr22:31592933 chr22:31592944 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_15753 0 0 1 U2AF2 POSTAR2 ENCODE chr22:31592903-31592950
64251 chr14 89069337 89069337 1 + C G BLCA 89069326 + 89069306 89069346 41 CTGCAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACCCA CTGCAGCCTCAAACAAGGGACTCAGAGGTCTGCTCCACCCA < 41bp 1 0.484435232571596 1 0.205687165260315 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89069326 chr14:89069337 synonymous SNV . 0 32 hm5C_associated_SNPs_15755 0 0 5 GRWD1 POSTAR2 ENCODE chr14:89069166-89069398
64251 chr1 44423150 44423150 1 + G T BLCA 44423168 + 44423148 44423188 41 TGGGCTCATTGGCCTCATCCCACGGATCAGCATCAGCAACG TGTGCTCATTGGCCTCATCCCACGGATCAGCATCAGCAACG < 41bp 1 0.770459585483833 1 0.789396405220032 experiment 0.459080829032334 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO13 ENSG00000117408 CDS Human protein_coding chr1:44423168 chr1:44423150 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_15756 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:44423132-44423152
64251 chr17 64299005 64299005 1 + G A BLCA 64298985 + 64298965 64299005 41 GGACCATGGCTGACGTTTTCCCGGGCAACGACTCCACGGCG GGACCATGGCTGACGTTTTCCCGGGCAACGACTCCACGGCA < 41bp 1 0.702313897985125 1 0.841305732727051 experiment 0.595372204029751 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64298985 chr17:64299005 synonymous SNV . 0 41 hm5C_associated_SNPs_15757 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr17:64298982-64299007
64251 chr1 44423149 44423149 1 + G T BLCA 44423168 + 44423148 44423188 41 TGGGCTCATTGGCCTCATCCCACGGATCAGCATCAGCAACG TTGGCTCATTGGCCTCATCCCACGGATCAGCATCAGCAACG < 41bp 1 0.737427556518789 1 0.729968905448914 experiment 0.525144886962423 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO13 ENSG00000117408 CDS Human protein_coding chr1:44423168 chr1:44423149 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_15758 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:44423132-44423152
64251 chr1 39927575 39927575 1 + G C BLCA 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTACAGATGACTGCTGTGGCTGACATTTTCGACC < 41bp 1 0.124624564869196 1 0.0730728209018707 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927575 nonsynonymous SNV 0.999 4 11 hm5C_associated_SNPs_15760 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927560-39927580
64251 chr19 10225381 10225381 1 + G T BLCA 10225362 + 10225342 10225382 41 CCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGT CCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCTT < 41bp 1 0.568767037714113 1 0.178724855184555 experiment 0.862465924571775 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225362 chr19:10225381 synonymous SNV . 0 40 hm5C_associated_SNPs_15761 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10225343-10225385
64251 chr1 180064823 180064823 1 + G C BLCA 180064828 + 180064808 180064848 41 AAAAATAAGGCAGAAGAAACCATTGTACCTCTAATGGCAGA AAAAATAAGGCAGAACAAACCATTGTACCTCTAATGGCAGA < 41bp 1 0.0825283444884268 1 0.372365415096283 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180064828 chr1:180064823 nonsynonymous SNV 0.998 2 16 hm5C_associated_SNPs_15762 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:180064801-180064832
64251 chr3 111667863 111667863 1 + G A BLCA 111667867 + 111667847 111667887 41 GTTTCCTGCTGATGCTGATGCTGTTGCCACTGAGCCTGCCA GTTTCCTGCTGATGCTAATGCTGTTGCCACTGAGCCTGCCA < 41bp 1 0.296470071196957 1 0.124471247196198 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111667867 chr3:111667863 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_15763 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:111667854-111667882
64251 chr12 56536120 56536120 1 + G C BLCA 56536133 + 56536113 56536153 41 CCTCTCAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACC CCTCTCACAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACC < 41bp 1 0.19936307769711 1 0.0612793564796448 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536133 chr12:56536120 nonsynonymous SNV 0.118 1 8 hm5C_associated_SNPs_15764 0 0 2 RPS3 POSTAR2 ENCODE chr12:56536070-56536126
64251 chr12 56536120 56536120 1 + G C BLCA 56536138 + 56536118 56536158 41 CAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACCGCTGG CACAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACCGCTGG < 41bp 1 0.413416995750067 1 0.367451995611191 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536138 chr12:56536120 nonsynonymous SNV 0.118 1 3 hm5C_associated_SNPs_15765 0 0 2 RPS3 POSTAR2 ENCODE chr12:56536070-56536126
64251 chr3 52245348 52245348 1 + G C BLCA 52245356 + 52245336 52245376 41 CACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTG CACGAGTTCTCTCATTGACACCGTACGGTCCTATGCTGCTG < 41bp 1 0.3742789597365 1 0.0782708525657654 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245356 chr3:52245348 synonymous SNV . 0 13 hm5C_associated_SNPs_15766 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr3 52245348 52245348 1 + G C BLCA 52245357 + 52245337 52245377 41 ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGG ACGAGTTCTCTCATTGACACCGTACGGTCCTATGCTGCTGG < 41bp 1 0.138958341229465 1 0.217686295509338 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245357 chr3:52245348 synonymous SNV . 0 12 hm5C_associated_SNPs_15767 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr3 52245348 52245348 1 + G C BLCA 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTCATTGACACCGTACGGTCCTATGCTGCTGGCTTC < 41bp 1 0.258338927787103 1 0.351582676172256 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245348 synonymous SNV . 0 8 hm5C_associated_SNPs_15768 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr8 144643973 144643973 1 + G T BLCA 144643964 + 144643944 144643984 41 CCACAGCTGCCCTCTGGCCTCTCCATGATGAGGTGCCTCCA CCACAGCTGCCCTCTGGCCTCTCCATGATTAGGTGCCTCCA < 41bp 1 0.736455649472809 1 0.97929048538208 experiment 0.527088701054381 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control GSDMD ENSG00000104518 CDS Human protein_coding chr8:144643964 chr8:144643973 nonsynonymous SNV 0.000 0 30 hm5C_associated_SNPs_15769 0 0 1 GRWD1 POSTAR2 ENCODE chr8:144643973-144643998
64251 chr9 15453176 15453176 1 + A G BLCA 15453178 + 15453158 15453198 41 GTCATCAGGGAGACTGTGAACATGTCATTGTCATTACTGAC GTCATCAGGGAGACTGTGGACATGTCATTGTCATTACTGAC < 41bp 1 0.272785102244064 1 0.0722055733203888 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15453178 chr9:15453176 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_15775 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:15453149-15453185
64251 chr9 131196706 131196706 1 + A C BLCA 131196705 + 131196685 131196725 41 ACAGCTACCTCGGACGGAAGCAGGTGAACCCTGAGAAGGAG ACAGCTACCTCGGACGGAAGCCGGTGAACCCTGAGAAGGAG < 41bp 1 0.343511247987114 1 0.734553635120392 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131196705 chr9:131196706 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_15776 0 0 3 BUD13 POSTAR2 ENCODE chr9:131196687-131196753
64251 chr22 38084997 38084997 1 + G A BLCA 38084995 + 38084975 38085015 41 GCTGCTCGGGCTGACCCCACCTGAGGTGGGTCCCAGTCTCA GCTGCTCGGGCTGACCCCACCTAAGGTGGGTCCCAGTCTCA < 41bp 1 0.713303117322124 1 0.606793880462646 experiment 0.573393765355753 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL12 ENSG00000100101 CDS Human protein_coding chr22:38084995 chr22:38084997 nonsynonymous SNV 0.412 1 23 hm5C_associated_SNPs_15777 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38084935-38084997
64251 chr10 103920550 103920550 1 + G C BLCA 103920534 + 103920514 103920554 41 AGCAGCTCTGATTCAGACAGCTCCAGCAGTGAGGAGGAGGA AGCAGCTCTGATTCAGACAGCTCCAGCAGTGAGGAGCAGGA < 41bp 1 0.684829897095831 1 0.647895574569702 experiment 0.630340205808338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920534 chr10:103920550 nonsynonymous SNV 0.991 2 37 hm5C_associated_SNPs_15778 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:103920474-103920560
64251 chr1 39927577 39927577 1 + G C BLCA 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTAGACATGACTGCTGTGGCTGACATTTTCGACC < 41bp 1 0.117272765003285 1 0.0390720963478088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927577 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_15779 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927560-39927580
64251 chr1 183096408 183096408 1 + G A BLCA 183096391 + 183096371 183096411 41 TCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAGATGATG TCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAGATAATG < 41bp 1 0.0812481936001477 1 0.120770424604416 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183096391 chr1:183096408 nonsynonymous SNV 0.983 0 38 hm5C_associated_SNPs_15780 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183096391-183096439
64251 chr11 67353985 67353985 1 + C G BLCA 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTGAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC < 41bp 1 0.0194946430100654 1 0.0722388327121735 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67353985 synonymous SNV . 0 7 hm5C_associated_SNPs_15781 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 67353985 67353985 1 + C G BLCA 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTGAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT < 41bp 1 0.259342857756039 1 0.200131118297577 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67353985 synonymous SNV . 0 6 hm5C_associated_SNPs_15782 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 65831159 65831159 1 + C G BLCA 65831150 + 65831130 65831170 41 GTGCCTGCTGGAATGGAGACCCCTGAACTCATTGAGCTGAG GTGCCTGCTGGAATGGAGACCCCTGAACTGATTGAGCTGAG < 41bp 1 0.149781271574559 1 0.310024917125702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65831150 chr11:65831159 synonymous SNV . 0 30 hm5C_associated_SNPs_15783 0 0 37 FMR1 POSTAR2 GSE39682,GSM977615 chr11:65831094-65831174
64251 chr11 67353995 67353995 1 + C T BLCA 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTCAAGGCCTTCTTGGCCTCCCCTGAGTACGTGAACC < 41bp 1 0.0215438656194056 1 0.163964211940765 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67353995 synonymous SNV . 0 17 hm5C_associated_SNPs_15784 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 67353995 67353995 1 + C T BLCA 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTCAAGGCCTTCTTGGCCTCCCCTGAGTACGTGAACCT < 41bp 1 0.254306625436233 1 0.22543653845787 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67353995 synonymous SNV . 0 16 hm5C_associated_SNPs_15785 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 65392689 65392689 1 + T C BLCA 65392705 + 65392685 65392725 41 TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG TCTGCGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG < 41bp 1 0.123606492014658 1 0.426356911659241 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392705 chr11:65392689 synonymous SNV . 0 5 hm5C_associated_SNPs_15786 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65392679-65392707
64251 chr2 32800276 32800276 1 + C T BLCA 32800281 + 32800261 32800301 41 CTGCTGGAATTGCTTCGGGCCATTGCTTCTTGTGCTGCCAT CTGCTGGAATTGCTTTGGGCCATTGCTTCTTGTGCTGCCAT < 41bp 1 0.0388585748874464 1 0.105528503656387 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32800281 chr2:32800276 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_15787 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32800249-32800281
64251 chr7 44100407 44100407 1 + G A BLCA 44100392 + 44100372 44100412 41 GCAGCCGACGACACAGAGATCTCCTTTGACCCCGAGAACCT GCAGCCGACGACACAGAGATCTCCTTTGACCCCGAAAACCT < 41bp 1 0.50726363991337 1 0.621905446052551 experiment 0.98547272017326 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44100392 chr7:44100407 synonymous SNV . 0 36 hm5C_associated_SNPs_15788 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44100354-44100414
64251 chr17 21731307 21731307 1 + G T BLCA 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAATATGGCGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.139695055617901 1 0.184940338134766 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731307 nonsynonymous SNV 0.988 0 11 hm5C_associated_SNPs_15789 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr8 73921215 73921215 1 + G A BLCA 73921233 + 73921213 73921253 41 CAGAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTG CAAAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTG < 41bp 1 0.28221754930498 1 0.070206880569458 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921233 chr8:73921215 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_15790 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:73921180-73921218
64251 chr15 99459920 99459920 1 + G A BLCA 99459934 + 99459914 99459954 41 CAGGAAGTATGCCGACGGCACCATCGACATTGAGGAGGTCA CAGGAAATATGCCGACGGCACCATCGACATTGAGGAGGTCA < 41bp 1 0.0118440691805829 1 0.0722474157810211 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99459934 chr15:99459920 synonymous SNV . 0 7 hm5C_associated_SNPs_15791 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:99459900-99459930
64251 chr1 29068983 29068983 1 + C T BLCA 29068982 + 29068962 29069002 41 CAGTCCCTCCATTGGCTTCTCCTATTCTTTGGGTGAAGCTG CAGTCCCTCCATTGGCTTCTCTTATTCTTTGGGTGAAGCTG < 41bp 1 0.123826368685678 1 0.102931261062622 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29068982 chr1:29068983 synonymous SNV . 0 22 hm5C_associated_SNPs_15793 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr1 29068983 29068983 1 + C T BLCA 29069000 + 29068980 29069020 41 CTCCTATTCTTTGGGTGAAGCTGCTTGGTCTACGGGGGGTG CTCTTATTCTTTGGGTGAAGCTGCTTGGTCTACGGGGGGTG < 41bp 1 0.498223257516102 1 0.188609570264816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069000 chr1:29068983 synonymous SNV . 0 4 hm5C_associated_SNPs_15794 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr19 34302357 34302357 1 + G A BLCA 34302343 + 34302323 34302363 41 AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGT AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGAAGACGT < 41bp 1 0.0899228057997299 1 0.0396442711353302 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302343 chr19:34302357 nonsynonymous SNV 0.922 3 35 hm5C_associated_SNPs_15796 0 0 1 PPIG POSTAR2 ENCODE chr19:34302319-34302380
64251 chr5 14359563 14359563 1 + G C BLCA 14359551 + 14359531 14359571 41 TGCAGCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTC TGCAGCAGCTGGACGAGGCGCAGTCGCAGATGCAGGAGCTC < 41bp 1 0.0648473677666488 1 0.247942477464676 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359551 chr5:14359563 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_15797 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359563 14359563 1 + G C BLCA 14359555 + 14359535 14359575 41 GCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTTCC GCAGCTGGACGAGGCGCAGTCGCAGATGCAGGAGCTCTTCC < 41bp 1 0.573594775880504 1 0.833060622215271 experiment 0.852810448238992 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359555 chr5:14359563 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_15798 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr17 17080692 17080692 1 + G A BLCA 17080673 + 17080653 17080693 41 GAAGGAGCAGCTCAAGGCTGCAACGGAAGCACTGGGGGAGA GAAGGAGCAGCTCAAGGCTGCAACGGAAGCACTGGGGGAAA < 41bp 1 0.300717848354633 1 0.283570647239685 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17080673 chr17:17080692 synonymous SNV . 0 40 hm5C_associated_SNPs_15799 0 0 2 PPIG POSTAR2 ENCODE chr17:17080608-17080719
64251 chr17 78704398 78704398 1 + G A BLCA 78704396 + 78704376 78704416 41 TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGC TCCCTCTGTCCATATATGACCTACAGACGTGGATGGGCAGC < 41bp 1 0.320486274785701 1 0.0889462828636169 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPTOR ENSG00000141564 CDS Human protein_coding chr17:78704396 chr17:78704398 synonymous SNV . 0 23 hm5C_associated_SNPs_15800 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:78704390-78704404
64251 chr16 29828297 29828297 1 + G A BLCA 29828289 + 29828269 29828309 41 CCAGAGCGAAGAGGAGAGATCCGATGAGGAGCCGGAGGCCA CCAGAGCGAAGAGGAGAGATCCGATGAGAAGCCGGAGGCCA < 41bp 1 0.497288378321504 1 0.196414440870285 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828289 chr16:29828297 nonsynonymous SNV 0.997 1 29 hm5C_associated_SNPs_15803 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828297 29828297 1 + G A BLCA 29828300 + 29828280 29828320 41 AGGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAA AGGAGAGATCCGATGAGAAGCCGGAGGCCAAAGAAGAGGAA < 41bp 1 0.755648146990585 1 0.637075364589691 experiment 0.48870370601883 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828300 chr16:29828297 nonsynonymous SNV 0.997 1 18 hm5C_associated_SNPs_15804 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828297 29828297 1 + G A BLCA 29828301 + 29828281 29828321 41 GGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAG GGAGAGATCCGATGAGAAGCCGGAGGCCAAAGAAGAGGAAG < 41bp 1 0.77009299037808 1 0.751368343830109 experiment 0.459814019243841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828301 chr16:29828297 nonsynonymous SNV 0.997 1 17 hm5C_associated_SNPs_15805 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828297 29828297 1 + G A BLCA 29828307 + 29828287 29828327 41 ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA ATCCGATGAGAAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA < 41bp 1 0.37853040273126 1 0.555944800376892 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828307 chr16:29828297 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_15806 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr13 113729380 113729380 1 + G A BLCA 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCACTACGCAGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.685259864210347 1 0.88517689704895 experiment 0.629480271579306 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729380 synonymous SNV . 0 15 hm5C_associated_SNPs_15808 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chr5 43122240 43122240 1 + G C BLCA 43122248 + 43122228 43122268 41 AATGAACAGCGAGAGCAGGACCGGTTTACTGACATCACCCT AATGAACAGCGACAGCAGGACCGGTTTACTGACATCACCCT < 41bp 1 0.475642555405925 1 0.206282585859299 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43122248 chr5:43122240 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_15809 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:43122195-43122241
64251 chr10 76729438 76729438 1 + T G BLCA 76729423 + 76729403 76729443 41 TTTTTATTCTCATAGGACACCCATCCTGTTTGAAATTTTGT TTTTTATTCTCATAGGACACCCATCCTGTTTGAAAGTTTGT < 41bp 1 0.00286106105783415 1 0.0646888315677643 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76729423 chr10:76729438 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_15811 0 0 2 UCHL5 POSTAR2 ENCODE chr10:76729417-76729482
64251 chr7 36438905 36438905 1 + G A BLCA 36438890 + 36438870 36438910 41 GTCCCGGCATCACTGCTGGGCATGAGGAGAGGGCTGAACTC GTCCCGGCATCACTGCTGGGCATGAGGAGAGGGCTAAACTC < 41bp 1 0.777774376790702 1 0.184494167566299 experiment 0.444451246418596 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438890 chr7:36438905 synonymous SNV . 0 36 hm5C_associated_SNPs_15812 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36438855-36438926
64251 chr7 36438905 36438905 1 + G A BLCA 36438903 + 36438883 36438923 41 TGCTGGGCATGAGGAGAGGGCTGAACTCAAGATTGGAAGCA TGCTGGGCATGAGGAGAGGGCTAAACTCAAGATTGGAAGCA < 41bp 1 0.709296389786183 1 0.240818351507187 experiment 0.581407220427633 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438903 chr7:36438905 synonymous SNV . 0 23 hm5C_associated_SNPs_15813 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36438855-36438926
64251 chr20 37632410 37632410 1 + G T BLCA 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTTTTGTCGATGCTCATCGAGCAGGCTCGAGCACT < 41bp 1 0.324544608612072 1 0.0628635883331299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632410 nonsynonymous SNV 0.372 1 10 hm5C_associated_SNPs_15815 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr20:37632392-37632412
64251 chr11 120957741 120957741 1 + G C BLCA 120957753 + 120957733 120957773 41 CAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG CAGCTCTCCGGCATTGCATTCCTTTGGCATTAGGGATGGAG < 41bp 1 0.0241778639074023 1 0.0932805836200714 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957753 chr11:120957741 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_15820 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:120957733-120957760
64251 chr6 31929373 31929373 1 + A T BLCA 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCTCTGGAGCAGTGGGCCATCCCTGTGGAC < 41bp 1 0.283508568115925 1 0.460815757513046 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929373 nonsynonymous SNV 0.965 0 16 hm5C_associated_SNPs_15821 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr7 44735681 44735681 1 + G A BLCA 44735695 + 44735675 44735715 41 AAAGATGAGAAGATCTTGCACATTAAGCACTGGCTGGACTC AAAGATAAGAAGATCTTGCACATTAAGCACTGGCTGGACTC < 41bp 1 0.219482820506036 1 0.0235190689563751 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44735695 chr7:44735681 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_15824 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:44735647-44735681
64251 chr9 130569504 130569504 1 + C T BLCA 130569510 + 130569490 130569530 41 TGGCAGCTGTGTCTCCATGCCCCCCTACTTCCGCTTCCTGA TGGCAGCTGTGTCTTCATGCCCCCCTACTTCCGCTTCCTGA < 41bp 1 0.0899149776930462 1 0.0510707795619965 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FPGS ENSG00000136877 CDS Human protein_coding chr9:130569510 chr9:130569504 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_15825 0 0 1 EFTUD2 POSTAR2 ENCODE chr9:130569411-130569508
64251 chr4 7026936 7026936 1 + T C BLCA 7026933 + 7026913 7026953 41 AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACG AGGACCTGCCCGCCGAGGAGCTGCTTGCCTCCATCGCCACG < 41bp 1 0.396535706488239 1 0.107042014598846 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026933 chr4:7026936 nonsynonymous SNV 0.639 3 24 hm5C_associated_SNPs_15826 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:7026935-7026957
64251 chr16 67314896 67314896 1 + G A BLCA 67314905 + 67314885 67314925 41 GCTGTACCTGCGAAGCATCCCCAGGTTTGAGGGAGGGGGTT GCTGTACCTGCAAAGCATCCCCAGGTTTGAGGGAGGGGGTT < 41bp 1 0.308109997715841 1 0.167500287294388 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67314905 chr16:67314896 nonsynonymous SNV 0.907 0 12 hm5C_associated_SNPs_15827 0 0 3 DDX24 POSTAR2 ENCODE chr16:67314859-67314899
64251 chr10 99216591 99216591 1 + G A BLCA 99216603 + 99216583 99216623 41 AATGGAATGAGCTGGGAGCCCCCTCCCTGGGTGACTGCTCA AATGGAATAAGCTGGGAGCCCCCTCCCTGGGTGACTGCTCA < 41bp 1 0.0958824502764381 1 0.102696895599365 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99216603 chr10:99216591 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_15828 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:99216584-99216614
64251 chr13 28197127 28197127 1 + G T BLCA 28197130 + 28197110 28197150 41 TTGTATTGCACGAGGAAGACCATACCCTAGGAAATTCTCTA TTGTATTGCACGAGGAATACCATACCCTAGGAAATTCTCTA < 41bp 1 0.0549899014031697 1 0.121714890003204 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197130 chr13:28197127 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_15831 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:28197073-28197156
64251 chr1 110129355 110129355 1 + G A BLCA 110129354 + 110129334 110129374 41 CTTTATTTCTTTTTCAGAACCGAATGCATGAAAGCATGAAA CTTTATTTCTTTTTCAGAACCAAATGCATGAAAGCATGAAA < 41bp 1 0.182551871313574 1 0.327545553445816 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110129354 chr1:110129355 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_15833 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:110129355-110129377
64251 chr4 79399118 79399118 1 + C T BLCA 79399112 + 79399092 79399132 41 GAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGGA GAATTCACCCAGGCGAAGGTCATTATTAACGATACCGAGGA < 41bp 1 0.0966006531121772 1 0.0729880034923553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79399112 chr4:79399118 synonymous SNV . 0 27 hm5C_associated_SNPs_15834 0 0 1 GRWD1 POSTAR2 ENCODE chr4:79399114-79399137
64251 chr13 103286387 103286387 1 + G A BLCA 103286380 + 103286360 103286400 41 TAACTGGACACTGAGAGGGACGCAGCTGATGAATGGAACAT TAACTGGACACTGAGAGGGACGCAGCTAATGAATGGAACAT < 41bp 1 0.432432646956509 1 0.0993805527687073 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103286380 chr13:103286387 synonymous SNV . 0 28 hm5C_associated_SNPs_15836 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:103286368-103286390
64251 chr19 48832670 48832670 1 + C T BLCA 48832653 + 48832633 48832673 41 TCATGGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTCATC TCATGGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTTATC < 41bp 1 0.452118348037622 1 0.0515997111797333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832653 chr19:48832670 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_15837 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:48832649-48832676
64251 chr6 151671189 151671189 1 + C T BLCA 151671207 + 151671187 151671227 41 CTCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC CTTCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC < 41bp 1 0.661961616844487 1 0.671864151954651 experiment 0.676076766311026 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671207 chr6:151671189 nonsynonymous SNV 0.153 0 3 hm5C_associated_SNPs_15838 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151671164-151671203
64251 chr2 202141587 202141587 1 + G A BLCA 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCAGGGATACTGTCTGATCATCAACAATCA < 41bp 1 0.231965525003329 1 0.101947814226151 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141587 nonsynonymous SNV 0.925 5 14 hm5C_associated_SNPs_15839 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:202141579-202141603
64251 chr2 135180409 135180409 1 + C T BLCA 135180429 + 135180409 135180449 41 CGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGG TGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGG < 41bp 1 0.0759455283788534 1 0.0186198055744171 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135180429 chr2:135180409 synonymous SNV . 0 1 hm5C_associated_SNPs_15841 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:135180407-135180438
64251 chr2 162091940 162091940 1 + G A BLCA 162091953 + 162091933 162091973 41 AGTATGTGAATTCTGTCAAGCAGTTTTCCCACCATCCATTA AGTATGTAAATTCTGTCAAGCAGTTTTCCCACCATCCATTA < 41bp 1 0.45740469463462 1 0.0687772631645203 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TANK ENSG00000136560 CDS Human protein_coding chr2:162091953 chr2:162091940 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_15842 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:162091940-162091960
64251 chr14 105936422 105936422 1 + C A BLCA 105936408 + 105936388 105936428 41 ACCTCTGCCCACAGGAAGATCCGCAAGCTGCTCTCATCCTC ACCTCTGCCCACAGGAAGATCCGCAAGCTGCTCTAATCCTC < 41bp 1 0.615735274667729 1 0.310953289270401 experiment 0.768529450664542 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936408 chr14:105936422 stopgain 0.920 0 35 hm5C_associated_SNPs_15843 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105936399-105936435
64251 chr22 19492958 19492958 1 + G A BLCA 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CGGAACGAGGATGAGAAGAACACACTCTCCGTGGACTGCAC < 41bp 1 0.378541422761141 1 0.0961433053016663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492958 nonsynonymous SNV 0.122 1 16 hm5C_associated_SNPs_15844 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:19492940-19492960
64251 chr3 120315375 120315375 1 + C G BLCA 120315381 + 120315361 120315401 41 ACGATCCCAACCGCCGAGGGCTCATCGTGAGTGTGGGGCCT ACGATCCCAACCGCGGAGGGCTCATCGTGAGTGTGGGGCCT < 41bp 1 0.483707463154367 1 0.0560665726661682 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315381 chr3:120315375 nonsynonymous SNV 0.051 0 15 hm5C_associated_SNPs_15845 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:120315356-120315387
64251 chr22 19492957 19492957 1 + G A BLCA 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CGGAACGAGGATGAAGAGAACACACTCTCCGTGGACTGCAC < 41bp 1 0.391118830831495 1 0.109330862760544 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492957 synonymous SNV . 0 15 hm5C_associated_SNPs_15846 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:19492940-19492960
64251 chr15 50789403 50789403 1 + C T BLCA 50789404 + 50789384 50789424 41 AGAAATCTGGAAGTTACCACCTGTGCTTTTAGTGCATCTGA AGAAATCTGGAAGTTACCATCTGTGCTTTTAGTGCATCTGA < 41bp 1 0.369821799783676 1 0.298350274562836 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50789404 chr15:50789403 nonsynonymous SNV 0.996 2 20 hm5C_associated_SNPs_15847 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:50789378-50789414
64251 chr15 63354438 63354438 1 + G C BLCA 63354456 + 63354436 63354476 41 ATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAG ATCAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAG < 41bp 1 0.0681104172268937 1 0.131077110767365 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63354456 chr15:63354438 nonsynonymous SNV 0.995 5 3 hm5C_associated_SNPs_15848 0 0 11 GPKOW POSTAR2 ENCODE chr15:63354401-63354446
64251 chr7 87530130 87530130 1 + G A BLCA 87530114 + 87530094 87530134 41 CGATAAGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAG CGATAAGTATGGTGGAACCTCAATTCAACTCCAGTTAAAAG < 41bp 1 0.140291332286269 1 0.290312856435776 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530114 chr7:87530130 synonymous SNV . 0 37 hm5C_associated_SNPs_15849 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:87530099-87530131
64251 chr7 87530130 87530130 1 + G A BLCA 87530119 + 87530099 87530139 41 AGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAGAGAAG AGTATGGTGGAACCTCAATTCAACTCCAGTTAAAAGAGAAG < 41bp 1 0.271970609201776 1 0.575564980506897 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530119 chr7:87530130 synonymous SNV . 0 32 hm5C_associated_SNPs_15850 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:87530099-87530131
64251 chr7 87530130 87530130 1 + G A BLCA 87530122 + 87530102 87530142 41 ATGGTGGAACCTCAATTCAACTCCAGTTGAAAGAGAAGAAG ATGGTGGAACCTCAATTCAACTCCAGTTAAAAGAGAAGAAG < 41bp 1 0.756733049522221 1 0.528443515300751 experiment 0.486533900955558 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530122 chr7:87530130 synonymous SNV . 0 29 hm5C_associated_SNPs_15851 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:87530099-87530131
64251 chr7 87530130 87530130 1 + G A BLCA 87530124 + 87530104 87530144 41 GGTGGAACCTCAATTCAACTCCAGTTGAAAGAGAAGAAGAA GGTGGAACCTCAATTCAACTCCAGTTAAAAGAGAAGAAGAA < 41bp 1 0.325987975256505 1 0.695017576217651 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530124 chr7:87530130 synonymous SNV . 0 27 hm5C_associated_SNPs_15852 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:87530099-87530131
64251 chr22 19492955 19492955 1 + G A BLCA 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CGGAACGAGGATAAGGAGAACACACTCTCCGTGGACTGCAC < 41bp 1 0.31772105774713 1 0.139867275953293 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492955 nonsynonymous SNV 0.114 1 13 hm5C_associated_SNPs_15853 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:19492940-19492960
64251 chr16 2577863 2577863 1 + C T BLCA 2577853 + 2577833 2577873 41 CACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT CACCTCCGCTCCTTCGAGGCCGATGCCTTCTAGGACTTGCT < 41bp 1 0.0942658306475221 1 0.107930779457092 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577853 chr16:2577863 stopgain 0.571 0 31 hm5C_associated_SNPs_15856 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2577854-2577885
64251 chrX 105921470 105921470 1 + T C BLCA 105921458 + 105921438 105921478 41 AAAGTGGAAGTCTATTTGCACAAGATTTATAGTCCAGAGAA AAAGTGGAAGTCTATTTGCACAAGATTTATAGCCCAGAGAA < 41bp 1 0.678556080120489 1 0.485595643520355 experiment 0.642887839759021 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105921458 chrX:105921470 synonymous SNV . 0 33 hm5C_associated_SNPs_15860 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:105921461-105921491
64251 chr12 56531992 56531992 1 + C G BLCA 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG GAGGATGTCCCATGTGGCCGCCTGCACTTGCGCCTGGAGCG < 41bp 1 0.0656297081013757 1 0.699091017246246 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56531992 nonsynonymous SNV 0.994 4 14 hm5C_associated_SNPs_15861 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr12 56531992 56531992 1 + C G BLCA 56532000 + 56531980 56532020 41 AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGT AGGATGTCCCATGTGGCCGCCTGCACTTGCGCCTGGAGCGT < 41bp 1 0.599953378904983 1 0.716411292552948 experiment 0.800093242190033 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532000 chr12:56531992 nonsynonymous SNV 0.994 4 13 hm5C_associated_SNPs_15862 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr12 104327828 104327828 1 + C T BLCA 104327808 + 104327788 104327828 41 AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATC AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATT < 41bp 1 0.222499685844116 1 0.0853283405303955 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327808 chr12:104327828 nonsynonymous SNV 1.000 5 41 hm5C_associated_SNPs_15863 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:104327731-104327851
64251 chr16 22337220 22337220 1 + G A BLCA 22337234 + 22337214 22337254 41 GTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAG GTGTGCAGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAG < 41bp 1 0.531593648985581 1 0.202607780694962 experiment 0.936812702028838 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337234 chr16:22337220 nonsynonymous SNV 0.900 0 7 hm5C_associated_SNPs_15864 0 0 8 DDX24 POSTAR2 ENCODE chr16:22337180-22337220
64251 chr16 22337220 22337220 1 + G A BLCA 22337235 + 22337215 22337255 41 TGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGG TGTGCAGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGG < 41bp 1 0.336294464377755 1 0.340906858444214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337235 chr16:22337220 nonsynonymous SNV 0.900 0 6 hm5C_associated_SNPs_15865 0 0 8 DDX24 POSTAR2 ENCODE chr16:22337180-22337220
64251 chr11 4091330 4091330 1 + G C BLCA 4091338 + 4091318 4091358 41 GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCCAAGGA GGCTGCTGGTTTCCCTATATCCAGAACCGTTACTCCAAGGA < 41bp 1 0.634927517762878 1 0.738671839237213 experiment 0.730144964474243 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4091338 chr11:4091330 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_15867 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:4091291-4091330
64251 chr3 51673450 51673450 1 + G T BLCA 51673466 + 51673446 51673486 41 CCCTGATGTGCTGTATGAAGCCCTTCAGAAGGAGAGCTTGG CCCTTATGTGCTGTATGAAGCCCTTCAGAAGGAGAGCTTGG < 41bp 1 0.192283676364732 1 0.0738855004310608 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51673466 chr3:51673450 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_15868 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:51673440-51673460
64251 chr11 65273165 65273165 1 + G T BLCA 65273153 + 65273133 65273173 41 GGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAACTATGT GGTAACGATGGTGTCGAGGTCTTTGGTGGGTTTAACTATGT < 41bp 1 0.464480809025555 1 0.250134140253067 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273153 chr11:65273165 . . 0 33 hm5C_associated_SNPs_15869 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273160-65273220
64251 chr11 65273165 65273165 1 + G T BLCA 65273168 + 65273148 65273188 41 GAGGTCTTTGGTGGGTTGAACTATGTTAGAAAAGGCCATTA GAGGTCTTTGGTGGGTTTAACTATGTTAGAAAAGGCCATTA < 41bp 1 0.663603864731991 1 0.383654445409775 experiment 0.672792270536018 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273168 chr11:65273165 . . 0 18 hm5C_associated_SNPs_15870 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273160-65273220
64251 chr14 89336504 89336504 1 + C G BLCA 89336501 + 89336481 89336521 41 GCATGCATTGGAAGCAACCACTTCTATTCTGATCAGCCAGA GCATGCATTGGAAGCAACCACTTGTATTCTGATCAGCCAGA < 41bp 1 0.402821941191751 1 0.0703953504562378 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC8 ENSG00000165533 CDS Human protein_coding chr14:89336501 chr14:89336504 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_15871 0 0 1 ZNF622 POSTAR2 ENCODE chr14:89336414-89336513
64251 chr11 65273619 65273619 1 + G T BLCA 65273607 + 65273587 65273627 41 AGATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTT AGATGCTGGTGGTTGGCACTCCTGGTTTCCAGTACGGGGTT < 41bp 1 0.433617102818727 1 0.479976177215576 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;MASCRNA;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273607 chr11:65273619 . . 0 33 hm5C_associated_SNPs_15872 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr11:65273619-65273640
64251 chr11 65273619 65273619 1 + G T BLCA 65273608 + 65273588 65273628 41 GATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTTC GATGCTGGTGGTTGGCACTCCTGGTTTCCAGTACGGGGTTC < 41bp 1 0.616089399986173 1 0.421976268291473 experiment 0.767821200027654 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;MASCRNA;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273608 chr11:65273619 . . 0 32 hm5C_associated_SNPs_15873 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr11:65273619-65273640
64251 chr19 50881884 50881884 1 + C A BLCA 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG CTAAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG < 41bp 1 0.0847961641965265 1 0.108670294284821 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881884 stopgain 0.458 0 3 hm5C_associated_SNPs_15874 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:50881884-50881885
64251 chr1 153713793 153713793 1 + C A BLCA 153713778 + 153713758 153713798 41 CAGGTGTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT CAGGTGTGCAAAGGCCTCCCCCAGCATGAAGAAATATGCCT < 41bp 1 0.125587490288586 1 0.257445573806763 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153713778 chr1:153713793 synonymous SNV . 0 36 hm5C_associated_SNPs_15875 0 0 10 FUS POSTAR2 GSE40653,GSM998875 chr1:153713780-153713800
64251 chr22 40662821 40662821 1 + C T BLCA 40662825 + 40662805 40662845 41 CTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGG CTGGAGCAGCGGGCCATAGCCTGCAACACCTAAGGATGAGG < 41bp 1 0.462698843805518 1 0.842790007591248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40662825 chr22:40662821 stopgain 0.716 0 17 hm5C_associated_SNPs_15876 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr22:40662813-40662835
64251 chr11 65273350 65273350 1 + G T BLCA 65273330 + 65273310 65273350 41 ACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGAG ACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGAT < 41bp 1 0.69405033121915 1 0.382556438446045 experiment 0.6118993375617 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273330 chr11:65273350 . . 0 41 hm5C_associated_SNPs_15877 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr11 65273350 65273350 1 + G T BLCA 65273337 + 65273317 65273357 41 TGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATAG TGCTGGGTGGGAACATGTAACTTGTAGACTGGATAAGATAG < 41bp 1 0.699653400767593 1 0.114173710346222 experiment 0.600693198464815 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273337 chr11:65273350 . . 0 34 hm5C_associated_SNPs_15878 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr1 87208005 87208005 1 + C A BLCA 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATAACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG < 41bp 1 0.290664834732259 1 0.199993252754211 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208005 synonymous SNV . 0 3 hm5C_associated_SNPs_15879 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:87207978-87208006
64251 chr12 53663123 53663123 1 + C T BLCA 53663114 + 53663094 53663134 41 CCCTCCATGCCTGCTTGGTGCAGTGCTCTCGCGAGGCTGCT CCCTCCATGCCTGCTTGGTGCAGTGCTCTTGCGAGGCTGCT < 41bp 1 0.330232848153699 1 0.158063799142838 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663114 chr12:53663123 nonsynonymous SNV 0.913 1 30 hm5C_associated_SNPs_15883 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:53663090-53663128
64251 chr16 81078057 81078057 1 + G A BLCA 81078069 + 81078049 81078089 41 CTCAAACTGAAGAGAGTGAACTTAGCACCATGACCACCGAG CTCAAACTAAAGAGAGTGAACTTAGCACCATGACCACCGAG < 41bp 1 0.293748179231166 1 0.259461939334869 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078069 chr16:81078057 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_15884 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:81078023-81078057
64251 chr13 113487179 113487179 1 + C T BLCA 113487177 + 113487157 113487197 41 GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCGG GAACTGCTTTTTTATAGGAGCGTGAGGAGCTGTTTTTCCGG < 41bp 1 0.384798965841986 1 0.405620753765106 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487177 chr13:113487179 synonymous SNV . 0 23 hm5C_associated_SNPs_15885 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:113487173-113487205
64251 chr14 102466402 102466402 1 + G C BLCA 102466397 + 102466377 102466417 41 AAGTTTGGTAGGCTGAAGGACGACAGAGAGAAGTGTGCAAA AAGTTTGGTAGGCTGAAGGACGACACAGAGAAGTGTGCAAA < 41bp 1 0.225085861674867 1 0.219928681850433 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466397 chr14:102466402 nonsynonymous SNV 0.976 1 26 hm5C_associated_SNPs_15886 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:102466368-102466404
64251 chr14 102466402 102466402 1 + G C BLCA 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGACGACACAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG < 41bp 1 0.174640720183211 1 0.606931746006012 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466402 nonsynonymous SNV 0.976 1 9 hm5C_associated_SNPs_15887 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:102466368-102466404
64251 chr20 25228820 25228820 1 + G A BLCA 25228804 + 25228784 25228824 41 CCATCTCTTTTCCTCCGCCTCCGCCGGCGCGATGGCGAAGC CCATCTCTTTTCCTCCGCCTCCGCCGGCGCGATGGCAAAGC < 41bp 1 0.387484918904514 1 0.388119339942932 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PYGB ENSG00000100994 CDS Human protein_coding chr20:25228804 chr20:25228820 synonymous SNV . 0 37 hm5C_associated_SNPs_15890 0 0 2 DDX3X POSTAR2 ENCODE chr20:25228757-25228831
64251 chr10 102795805 102795805 1 + C G BLCA 102795823 + 102795803 102795843 41 TTCAATGCCATTGTTAACTACTCCAACCGCAGTGGTGACAC TTGAATGCCATTGTTAACTACTCCAACCGCAGTGGTGACAC < 41bp 1 0.761655863290592 1 0.972516298294067 experiment 0.476688273418816 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SFXN3 ENSG00000107819 CDS Human protein_coding chr10:102795823 chr10:102795805 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_15891 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:102795779-102795817
64251 chr17 37360850 37360850 1 + G C BLCA 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGCGCCTCCAGGCCAACAAGGAGGAGATCATCA < 41bp 1 0.135292852043701 1 0.0968330502510071 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360850 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_15892 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360850 37360850 1 + G C BLCA 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGCCAACAAGGAGGAGATCATCAAGACTTTATCCAAGGA < 41bp 1 0.443549822769708 1 0.126711755990982 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360850 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_15893 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr14 56079156 56079156 1 + C G BLCA 56079153 + 56079133 56079173 41 CCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATC CCTGTGCTTGAAGAGCAGGTCATGAAAGAAAGTGACGCATC < 41bp 1 0.714383706037897 1 0.126147896051407 experiment 0.571232587924206 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56079153 chr14:56079156 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_15894 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221663 chr14:56079140-56079160
64251 chr11 209946 209946 1 + C T BLCA 209927 + 209907 209947 41 GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCC GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATTC < 41bp 1 0.608869494550273 1 0.122648984193802 experiment 0.782261010899453 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209927 chr11:209946 synonymous SNV . 0 40 hm5C_associated_SNPs_15895 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209923-209949
64251 chr19 45490661 45490661 1 + G A BLCA 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATGAGTTGTACGAGCAGTCAGATAAGGAGCAGGACTCGG < 41bp 1 0.606328723303943 1 0.461503803730011 experiment 0.787342553392114 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490661 nonsynonymous SNV 0.998 2 26 hm5C_associated_SNPs_15896 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45490645-45490675
64251 chr22 18979420 18979420 1 + C T BLCA 18979435 + 18979415 18979455 41 AGGCCCGTCCTGGTGGAGTTCACCCTGCTGGAGATGGAGAA AGGCCTGTCCTGGTGGAGTTCACCCTGCTGGAGATGGAGAA < 41bp 1 0.255142952814818 1 0.258341133594513 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979435 chr22:18979420 . . 0 6 hm5C_associated_SNPs_15897 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:18979412-18979447
64251 chr2 204078320 204078320 1 + C G BLCA 204078310 + 204078290 204078330 41 GTTTGTGTCACCAAAGAATACAGCCATATTCTTGTAGGTTT GTTTGTGTCACCAAAGAATACAGCCATATTGTTGTAGGTTT < 41bp 1 0.258117381866941 1 0.110039502382278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204078310 chr2:204078320 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_15899 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:204078320-204078340
64251 chr17 38318321 38318321 1 + G A BLCA 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAAAT < 41bp 1 0.123526565794653 1 0.131465137004852 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318321 nonsynonymous SNV 0.995 4 39 hm5C_associated_SNPs_15900 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr1 173454533 173454533 1 + G A BLCA 173454543 + 173454523 173454563 41 AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATA AGAGCCCACAAAAAAGTTACCTTTTCCCATCATCGATGATA < 41bp 1 0.0710290653637307 1 0.019072026014328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454543 chr1:173454533 nonsynonymous SNV 0.992 1 11 hm5C_associated_SNPs_15901 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173454502-173454552
64251 chr3 124456779 124456779 1 + C G BLCA 124456785 + 124456765 124456805 41 GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCC GCACCCAAAGAACTGAGCTTCGGTGCACGTGCAGAGCTGCC < 41bp 1 0.382679621879355 1 0.838840067386627 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UMPS ENSG00000114491 CDS Human protein_coding chr3:124456785 chr3:124456779 nonsynonymous SNV . 0 15 hm5C_associated_SNPs_15902 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr3:124456770-124456796
64251 chr12 56663988 56663988 1 + G C BLCA 56663999 + 56663979 56664019 41 ATGTTTTTTGATGAGGTTGTCAAACAGAATGTTGCTGCCTT ATGTTTTTTCATGAGGTTGTCAAACAGAATGTTGCTGCCTT < 41bp 1 0.343785761401619 1 0.489324659109116 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ10A ENSG00000135469 CDS Human protein_coding chr12:56663999 chr12:56663988 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_15904 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56663961-56664000
64251 chr10 17276805 17276805 1 + C T BLCA 17276817 + 17276797 17276837 41 GTGGATGCCCTTAAAGGAACCGTGAGTACCAACCCTGCAGT GTGGATGCTCTTAAAGGAACCGTGAGTACCAACCCTGCAGT < 41bp 1 0.727538194039497 1 0.704128921031952 experiment 0.544923611921006 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276817 chr10:17276805 synonymous SNV . 0 9 hm5C_associated_SNPs_15905 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr1 145509174 145509174 1 + G A BLCA 145509172 + 145509152 145509192 41 TTCTTTTTCCCTAGAGGTGGCCGAAGACGCAGCAGAAGTCC TTCTTTTTCCCTAGAGGTGGCCAAAGACGCAGCAGAAGTCC < 41bp 1 0.147341168132655 1 0.393438577651978 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM8A ENSG00000131795 CDS Human other chr1:145509172 chr1:145509174 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_15907 0 0 8 BUD13 POSTAR2 ENCODE chr1:145509154-145509200
64251 chr1 145509174 145509174 1 + G A BLCA 145509191 + 145509171 145509211 41 GCCGAAGACGCAGCAGAAGTCCAGACCGGAGACGTCGCTGA GCCAAAGACGCAGCAGAAGTCCAGACCGGAGACGTCGCTGA < 41bp 1 0.336193745585925 1 0.337057650089264 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM8A ENSG00000131795 CDS Human other chr1:145509191 chr1:145509174 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_15908 0 0 8 BUD13 POSTAR2 ENCODE chr1:145509154-145509200
64251 chr6 116600375 116600375 1 - C T BLCA 116600380 - 116600360 116600400 41 AGGTGAAGAAATAGAAGTGGCGGAGGAGGATAGATTGGAGG AGGTGAAGAAATAGAAGTGGCGGAGAAGGATAGATTGGAGG < 41bp 1 0.728101415690206 1 0.301293879747391 experiment 0.543797168619587 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600380 chr6:116600375 nonsynonymous SNV 0.012 0 26 hm5C_associated_SNPs_15909 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:116600341-116600385
64251 chr16 31091412 31091412 1 + G A BLCA 31091428 + 31091408 31091448 41 CCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTTCCG CCCCAACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTTCCG < 41bp 1 0.695781135649961 1 0.794861972332001 experiment 0.608437728700078 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091428 chr16:31091412 nonsynonymous SNV 0.993 0 5 hm5C_associated_SNPs_15923 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:31091395-31091425
64251 chr20 306653 306653 1 + G T BLCA 306648 + 306628 306668 41 CGGGCCGGCCGAGGAGGGGGCGCGCGAGCCCGGCTGGTGCA CGGGCCGGCCGAGGAGGGGGCGCGCTAGCCCGGCTGGTGCA < 41bp 1 0.682690193816863 1 0.647439002990723 experiment 0.634619612366274 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX12 ENSG00000177732 CDS Human protein_coding chr20:306648 chr20:306653 stopgain 0.760 0 26 hm5C_associated_SNPs_15924 0 0 6 DDX3X POSTAR2 ENCODE chr20:306552-306669
64251 chr20 306653 306653 1 + G T BLCA 306652 + 306632 306672 41 CCGGCCGAGGAGGGGGCGCGCGAGCCCGGCTGGTGCAAGAC CCGGCCGAGGAGGGGGCGCGCTAGCCCGGCTGGTGCAAGAC < 41bp 1 0.569202680847758 1 0.0877096056938171 experiment 0.861594638304484 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX12 ENSG00000177732 CDS Human protein_coding chr20:306652 chr20:306653 stopgain 0.760 0 22 hm5C_associated_SNPs_15925 0 0 6 DDX3X POSTAR2 ENCODE chr20:306552-306669
64251 chr20 306653 306653 1 + G T BLCA 306657 + 306637 306677 41 CGAGGAGGGGGCGCGCGAGCCCGGCTGGTGCAAGACCCCGA CGAGGAGGGGGCGCGCTAGCCCGGCTGGTGCAAGACCCCGA < 41bp 1 0.686922769259977 1 0.814125537872314 experiment 0.626154461480046 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOX12 ENSG00000177732 CDS Human protein_coding chr20:306657 chr20:306653 stopgain 0.760 0 17 hm5C_associated_SNPs_15926 0 0 6 DDX3X POSTAR2 ENCODE chr20:306552-306669
64251 chr3 184648312 184648312 1 + G A BLCA 184648321 + 184648301 184648341 41 GACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA GACACAGTGCAAAGGAGAAGCAGTCTGTATGGCAGAAAGCA < 41bp 1 0.0836918207409064 1 0.233729809522629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184648321 chr3:184648312 nonsynonymous SNV 0.992 1 12 hm5C_associated_SNPs_15928 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184648293-184648331
64251 chr19 33202726 33202726 1 + G T BLCA 33202731 + 33202711 33202751 41 GAAAAAAAGACTGAGGAAATCATGAAGGAAGGCAAGCAGTT GAAAAAAAGACTGAGTAAATCATGAAGGAAGGCAAGCAGTT < 41bp 1 0.57845775848666 1 0.342743158340454 experiment 0.843084483026681 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202731 chr19:33202726 stopgain 0.997 0 16 hm5C_associated_SNPs_15929 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:33202665-33202757
64251 chr19 1978449 1978449 1 + C T BLCA 1978465 + 1978445 1978485 41 CGATCAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGG CGATTAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGG < 41bp 1 0.446717182214661 1 0.808002948760986 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1978465 chr19:1978449 synonymous SNV . 0 5 hm5C_associated_SNPs_15930 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:1978440-1978460
64251 chr2 220097299 220097299 1 + T G BLCA 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACACTGGATCGGGAGAGGGCTACATGTGAGAAGTTGAGCC < 41bp 1 0.745298194506969 1 0.830225467681885 experiment 0.509403610986062 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097299 nonsynonymous SNV 0.113 0 27 hm5C_associated_SNPs_15934 0 0 10 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr1 155279692 155279692 1 + G T BLCA 155279674 + 155279654 155279694 41 GGTGGCTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACGGG GGTGGCTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACTGG < 41bp 1 0.645181947022206 1 0.281249552965164 experiment 0.709636105955588 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279674 chr1:155279692 nonsynonymous SNV 0.615 0 39 hm5C_associated_SNPs_15935 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155279692-155279693
64251 chr1 155279692 155279692 1 + G T BLCA 155279678 + 155279658 155279698 41 GCTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACGGGTACC GCTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACTGGTACC < 41bp 1 0.0699545833088033 1 0.0718069076538086 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279678 chr1:155279692 nonsynonymous SNV 0.615 0 35 hm5C_associated_SNPs_15936 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155279692-155279693
64251 chr1 155279692 155279692 1 + G T BLCA 155279679 + 155279659 155279699 41 CTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACGGGTACCC CTGGGTTCCCTACGGCGGCCCTCCCTGGTGCACTGGTACCC < 41bp 1 0.464608124200329 1 0.855092644691467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279679 chr1:155279692 nonsynonymous SNV 0.615 0 34 hm5C_associated_SNPs_15937 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155279692-155279693
64251 chr3 44815901 44815901 1 + G T BLCA 44815917 + 44815897 44815937 41 CAGCGTGACAAATGGTCAGTCTAACCAACCAAGGTAAGGAG CAGCTTGACAAATGGTCAGTCTAACCAACCAAGGTAAGGAG < 41bp 1 0.10493516917926 1 0.195492446422577 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF15 ENSG00000163808 CDS Human protein_coding chr3:44815917 chr3:44815901 nonsynonymous SNV 0.978 1 5 hm5C_associated_SNPs_15938 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:44815887-44815923
64251 chr6 146875732 146875732 1 + G A BLCA 146875716 + 146875696 146875736 41 AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTGTT AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAATGTT < 41bp 1 0.530435215003474 1 0.732195317745209 experiment 0.939129569993052 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875716 chr6:146875732 synonymous SNV . 0 37 hm5C_associated_SNPs_15940 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:146875705-146875732
64251 chr3 183368417 183368417 1 + C G BLCA 183368408 + 183368388 183368428 41 GCTGTGCTCTCAGCCTGTAGCAGCTACTTCAGAGCTATGTT GCTGTGCTCTCAGCCTGTAGCAGCTACTTGAGAGCTATGTT < 41bp 1 0.504709805319589 1 0.366583168506622 experiment 0.990580389360822 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368408 chr3:183368417 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_15942 0 0 3 FMR1 POSTAR2 ENCODE chr3:183368395-183368475
64251 chr16 30016683 30016683 1 + C T BLCA 30016663 + 30016643 30016683 41 CCCTAAGATGCCCCCCCCCACGATCCTGAGCACGGTCCCTC CCCTAAGATGCCCCCCCCCACGATCCTGAGCACGGTCCCTT < 41bp 1 0.259693397848607 1 0.100524127483368 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INO80E ENSG00000169592 CDS Human protein_coding chr16:30016663 chr16:30016683 nonsynonymous SNV 0.958 1 41 hm5C_associated_SNPs_15943 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30016661-30016689
64251 chr2 200824491 200824491 1 + G A BLCA 200824505 + 200824485 200824525 41 TGCATTGAAAGAAAAGGTTACTTCACTACCTGACAACCATA TGCATTAAAAGAAAAGGTTACTTCACTACCTGACAACCATA < 41bp 1 0.281912797012943 1 0.114675104618073 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824505 chr2:200824491 synonymous SNV . 0 7 hm5C_associated_SNPs_15945 0 0 2 EWSR1 POSTAR2 SRX029343 chr2:200824491-200824527
64251 chr17 34009793 34009793 1 + C G BLCA 34009813 + 34009793 34009833 41 CTCAATACCTTGGGCCCAGTCATGAAGATGGAACCTCTGAA GTCAATACCTTGGGCCCAGTCATGAAGATGGAACCTCTGAA < 41bp 1 0.695883622717666 1 0.504534065723419 experiment 0.608232754564668 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:34009813 chr17:34009793 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_15946 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:34009780-34009800
64251 chr1 150280533 150280533 1 + T C BLCA 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTACGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.718642275784226 1 0.788419485092163 experiment 0.562715448431548 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280533 synonymous SNV . 0 5 hm5C_associated_SNPs_15947 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:150280480-150280540
64251 chr2 54872396 54872396 1 + A G BLCA 54872378 + 54872358 54872398 41 GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCGGAAGAAG GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCGGAAGGAG < 41bp 1 0.407062062487964 1 0.819797992706299 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872378 chr2:54872396 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_15949 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr2 54872396 54872396 1 + A G BLCA 54872413 + 54872393 54872433 41 AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCT AAGGAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCT < 41bp 1 0.307907944840431 1 0.103343516588211 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872413 chr2:54872396 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_15950 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr3 52238004 52238004 1 + C T BLCA 52238023 + 52238003 52238043 41 TCTTCTTCAAGATAACTTGCCAAAATGTAAGTCTCATTGTT TTTTCTTCAAGATAACTTGCCAAAATGTAAGTCTCATTGTT < 41bp 1 0.333803421037485 1 0.165312945842743 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52238023 chr3:52238004 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_15951 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52237984-52238023
64251 chr11 118939921 118939921 1 + A G BLCA 118939940 + 118939920 118939960 41 GATCTGGTTCTTGCCACGTTCCTACAGCTTACAGGCTTCCA GGTCTGGTTCTTGCCACGTTCCTACAGCTTACAGGCTTCCA < 41bp 1 0.0772889107245895 1 0.586368083953857 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VPS11 ENSG00000160695 CDS Human protein_coding chr11:118939940 chr11:118939921 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_15958 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118939870-118939928
64251 chr12 57919782 57919782 1 + G A BLCA 57919787 + 57919767 57919807 41 GCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCA GCACTTTACAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCA < 41bp 1 0.368710056250759 1 0.538339614868164 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919787 chr12:57919782 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_15959 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919788 + 57919768 57919808 41 CACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAG CACTTTACAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAG < 41bp 1 0.246455034663572 1 0.299428790807724 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919788 chr12:57919782 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_15960 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919789 + 57919769 57919809 41 ACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGC ACTTTACAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAGC < 41bp 1 0.150360480661296 1 0.160284101963043 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919789 chr12:57919782 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_15961 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919790 + 57919770 57919810 41 CTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCT CTTTACAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAGCT < 41bp 1 0.188376136401414 1 0.237141072750092 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919790 chr12:57919782 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_15962 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919794 + 57919774 57919814 41 ACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCC ACAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCC < 41bp 1 0.21424487032753 1 0.120312511920929 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919794 chr12:57919782 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_15963 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919795 + 57919775 57919815 41 CAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA CAGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA < 41bp 1 0.22884819381267 1 0.104983448982239 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919795 chr12:57919782 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_15964 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919796 + 57919776 57919816 41 AGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC AGGGCCAAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC < 41bp 1 0.578683390425135 1 0.790171504020691 experiment 0.842633219149731 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919796 chr12:57919782 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_15965 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919800 + 57919780 57919820 41 CCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT CCAAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT < 41bp 1 0.220321129026709 1 0.0138973593711853 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919800 chr12:57919782 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_15966 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919782 57919782 1 + G A BLCA 57919802 + 57919782 57919822 41 GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA AAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA < 41bp 1 0.0211556565212019 1 0.0108990371227264 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919802 chr12:57919782 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_15967 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr2 216197224 216197224 1 + C G BLCA 216197204 + 216197184 216197224 41 TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCC TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCG < 41bp 1 0.0473232694739299 1 0.112897843122482 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197204 chr2:216197224 nonsynonymous SNV 0.995 5 41 hm5C_associated_SNPs_15970 0 0 6 FXR2 POSTAR2 ENCODE chr2:216197195-216197231
64251 chr2 216197224 216197224 1 + C G BLCA 216197205 + 216197185 216197225 41 TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCCC TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCGC < 41bp 1 0.383331904946424 1 0.296723365783691 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197205 chr2:216197224 nonsynonymous SNV 0.995 5 40 hm5C_associated_SNPs_15971 0 0 6 FXR2 POSTAR2 ENCODE chr2:216197195-216197231
64251 chr12 7050593 7050593 1 + C G BLCA 7050585 + 7050565 7050605 41 CCTTTCTGCCCCGATGTCAGCAGCTCATCAGCTGCAGGCCA CCTTTCTGCCCCGATGTCAGCAGCTCATGAGCTGCAGGCCA < 41bp 1 0.376330969448194 1 0.573878288269043 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATN1 ENSG00000111676 CDS Human protein_coding chr12:7050585 chr12:7050593 nonsynonymous SNV 0.977 2 29 hm5C_associated_SNPs_15972 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:7050580-7050640
64251 chrX 153695958 153695958 1 + C T BLCA 153695954 + 153695934 153695974 41 ACACTGTGCTGATAGGAGGCCAGCCGTGTTCGCTCACTGTC ACACTGTGCTGATAGGAGGCCAGCTGTGTTCGCTCACTGTC < 41bp 1 0.306335699221205 1 0.335675239562988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153695954 chrX:153695958 nonsynonymous SNV 0.179 3 25 hm5C_associated_SNPs_15973 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:153695958-153695959
64251 chr2 75104444 75104444 1 + G C BLCA 75104440 + 75104420 75104460 41 GAGACCAAAGACATCTCAGACATTGAAGGGTGAGCTTCTGG GAGACCAAAGACATCTCAGACATTCAAGGGTGAGCTTCTGG < 41bp 1 0.0321666081648683 1 0.0422433018684387 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HK2 ENSG00000159399 CDS Human protein_coding chr2:75104440 chr2:75104444 nonsynonymous SNV 0.858 5 25 hm5C_associated_SNPs_15974 0 0 8 BUD13 POSTAR2 ENCODE chr2:75104431-75104473
64251 chr7 44805095 44805095 1 + T A BLCA 44805096 + 44805076 44805116 41 CCCAGCGTGATGGAGATGATCGCCGCCCTGGGCCCCGGCGC CCCAGCGTGATGGAGATGAACGCCGCCCTGGGCCCCGGCGC < 41bp 1 0.772562694546206 1 0.39585942029953 experiment 0.454874610907587 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805096 chr7:44805095 nonsynonymous SNV 0.973 3 20 hm5C_associated_SNPs_15975 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:44805093-44805127
64251 chr1 203834186 203834186 1 + G A BLCA 203834189 + 203834169 203834209 41 GGTTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGA GGTTTTGATGAGTATATAAACCTTGTATTAGATGATGCAGA < 41bp 1 0.0753249002035857 1 0.134621679782867 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPE ENSG00000182004 CDS Human protein_coding chr1:203834189 chr1:203834186 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_15976 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:203834164-203834190
64251 chr17 16342882 16342882 1 + T C BLCA 16342874 + 16342854 16342894 41 GAAGCGATAACTGACGACGTCTAATGTCTATCTGACCGCAG GAAGCGATAACTGACGACGTCTAATGTCCATCTGACCGCAG < 41bp 1 0.24437084580277 1 0.0549175143241882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342874 chr17:16342882 . . 0 29 hm5C_associated_SNPs_15977 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16342882 16342882 1 + T C BLCA 16342881 + 16342861 16342901 41 TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTGA TAACTGACGACGTCTAATGTCCATCTGACCGCAGTCGCTGA < 41bp 1 0.0577994880390702 1 0.038604199886322 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342881 chr17:16342882 . . 0 22 hm5C_associated_SNPs_15978 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr12 109537036 109537036 1 + T C BLCA 109537024 + 109537004 109537044 41 TTGTTGCAGAAGAAAGAAAGCATTACACTGTTTATCCACCC TTGTTGCAGAAGAAAGAAAGCATTACACTGTTCATCCACCC < 41bp 1 0.215697294990937 1 0.0830960273742676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109537024 chr12:109537036 nonsynonymous SNV 0.926 4 33 hm5C_associated_SNPs_15980 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:109536994-109537036
64251 chr6 116600549 116600549 1 - C T BLCA 116600551 - 116600531 116600571 41 GTCTGAGCTGACGGCGGGGGCGGAGGCTGAGGCGGAGGAGG GTCTGAGCTGACGGCGGGGGCGAAGGCTGAGGCGGAGGAGG < 41bp 1 0.789581299563482 1 0.869725465774536 experiment 0.420837400873036 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600551 chr6:116600549 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_15981 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:116600525-116600551
64251 chr5 34929961 34929961 1 + G A BLCA 34929944 + 34929924 34929964 41 GATGAAGTGTCACTATGAGGCGCTGGGGGTGCGGCGCGACG GATGAAGTGTCACTATGAGGCGCTGGGGGTGCGGCGCAACG < 41bp 1 0.740522258688194 1 0.389523595571518 experiment 0.518955482623612 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929944 chr5:34929961 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_15982 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr5 34929961 34929961 1 + G A BLCA 34929960 + 34929940 34929980 41 GAGGCGCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCT GAGGCGCTGGGGGTGCGGCGCAACGCCAGCGAGGAGGAGCT < 41bp 1 0.654813685891862 1 0.148938298225403 experiment 0.690372628216276 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929960 chr5:34929961 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_15983 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr5 34929961 34929961 1 + G A BLCA 34929965 + 34929945 34929985 41 GCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCTCAAGA GCTGGGGGTGCGGCGCAACGCCAGCGAGGAGGAGCTCAAGA < 41bp 1 0.703298377283568 1 0.3235242664814 experiment 0.593403245432863 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929965 chr5:34929961 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_15984 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr22 22040818 22040818 1 + C T BLCA 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACCTCCACCGTGATGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.295712677497006 1 0.251104086637497 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040818 nonsynonymous SNV 0.013 1 14 hm5C_associated_SNPs_15985 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr8 104438289 104438289 1 + T G BLCA 104438295 + 104438275 104438315 41 TATTTCTAGGTTGGTGATGACAAAACTGTGAAGCAGTGGAA TATTTCTAGGTTGGGGATGACAAAACTGTGAAGCAGTGGAA < 41bp 1 0.63470546621098 1 0.579000771045685 experiment 0.730589067578041 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438295 chr8:104438289 synonymous SNV 0.997 0 15 hm5C_associated_SNPs_15986 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:104438280-104438308
64251 chr8 104438289 104438289 1 + T G BLCA 104438308 + 104438288 104438328 41 GTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCA GGGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCA < 41bp 1 0.430495670361347 1 0.775513470172882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438308 chr8:104438289 synonymous SNV 0.997 0 2 hm5C_associated_SNPs_15987 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:104438280-104438308
64251 chr14 21967264 21967264 1 - A C BLCA 21967278 - 21967258 21967298 41 TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAACCA TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCAGAAACCA < 41bp 1 0.0198871354407865 1 0.0497432947158813 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control METTL3 ENSG00000165819 CDS Human protein_coding chr14:21967278 chr14:21967264 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_15988 0 0 8 U2AF2 POSTAR2 GSE83923,CSM2221659 chr14:21967260-21967280
64251 chr16 85691140 85691140 1 + G C BLCA 85691160 + 85691140 85691180 41 GAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA CAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA < 41bp 1 0.334160139188074 1 0.572038412094116 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691160 chr16:85691140 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_15991 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr1 180034342 180034342 1 + C T BLCA 180034360 + 180034340 180034380 41 ATCTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA ATTTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA < 41bp 1 0.596979032538506 1 0.135182976722717 experiment 0.806041934922988 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180034360 chr1:180034342 synonymous SNV . 0 3 hm5C_associated_SNPs_15992 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:180034323-180034347
64251 chr19 18679354 18679354 1 + C T BLCA 18679364 + 18679344 18679384 41 TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC TGAGCCCCGGTTTCGAGGACCTGTCCCATGTCCAGCCTGGC < 41bp 1 0.136621262702087 1 0.197561919689178 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679364 chr19:18679354 synonymous SNV . 0 11 hm5C_associated_SNPs_15995 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:18679295-18679361
64251 chrX 103411545 103411545 1 + C A BLCA 103411562 + 103411542 103411582 41 CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG CCTACTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG < 41bp 1 0.788885927692204 1 0.224509626626968 experiment 0.422228144615591 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411562 chrX:103411545 nonsynonymous SNV 0.968 1 4 hm5C_associated_SNPs_15996 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585664 chrX:103411523-103411549
64251 chr16 4431764 4431764 1 + G A BLCA 4431752 + 4431732 4431772 41 GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTACCCGCAAC < 41bp 1 0.547832786721725 1 0.0976755321025848 experiment 0.90433442655655 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431752 chr16:4431764 nonsynonymous SNV 0.997 3 33 hm5C_associated_SNPs_15997 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:4431758-4431782
64251 chr17 43182991 43182991 1 + G C BLCA 43183002 + 43182982 43183022 41 CCTAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCG CCTAGGTTGCACTGGTGCTACAATAACCAGTCACCAGTGCG < 41bp 1 0.356837304436895 1 0.151230722665787 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NMT1 ENSG00000136448 CDS Human protein_coding chr17:43183002 chr17:43182991 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_15998 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:43182956-43183000
64251 chr6 144109920 144109920 1 + G C BLCA 144109932 + 144109912 144109952 41 CAGCCTGAGACCCACAGTGGCAGAGCTACAAGCTCGAAGGA CAGCCTGACACCCACAGTGGCAGAGCTACAAGCTCGAAGGA < 41bp 1 0.373373320319635 1 0.363463044166565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144109932 chr6:144109920 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_16000 0 0 3 BUD13 POSTAR2 ENCODE chr6:144109884-144109940
64251 chr2 3627712 3627712 1 + A T BLCA 3627693 + 3627673 3627713 41 TGCTTACCTTTTAAACTATTCTTTTAGCCGTACTCTGACAG TGCTTACCTTTTAAACTATTCTTTTAGCCGTACTCTGACTG < 41bp 1 0.0795402095358293 1 0.023492157459259 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3627693 chr2:3627712 synonymous SNV . 0 40 hm5C_associated_SNPs_16001 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:3627688-3627731
64251 chr20 21362667 21362667 1 + C T BLCA 21362679 + 21362659 21362699 41 GTCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGGTAA GTCCTCCTTCCCTTTTCCAGCAGCAAAGGTTTGACAGGTAA < 41bp 1 0.603529956870583 1 0.438811033964157 experiment 0.792940086258834 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRN2 ENSG00000088930 CDS Human protein_coding chr20:21362679 chr20:21362667 nonsynonymous SNV 0.994 4 9 hm5C_associated_SNPs_16002 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:21362646-21362682
64251 chr7 135272739 135272739 1 + A G BLCA 135272723 + 135272703 135272743 41 ATCTAGGGGTGGCTCATCAGCGGCCCCCTCAACGCCAGGTG ATCTAGGGGTGGCTCATCAGCGGCCCCCTCAACGCCGGGTG < 41bp 1 0.499263357210934 1 0.500184297561646 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135272723 chr7:135272739 nonsynonymous SNV 0.997 2 37 hm5C_associated_SNPs_16003 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr7:135272712-135272741
64251 chr10 43292282 43292282 1 + C T BLCA 43292264 + 43292244 43292284 41 GCGGAGGAAGCTGATGAAAGCAGTGAAGAAGAGGACTGCAC GCGGAGGAAGCTGATGAAAGCAGTGAAGAAGAGGACTGTAC < 41bp 1 0.584811638324669 1 0.417782962322235 experiment 0.830376723350661 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292264 chr10:43292282 synonymous SNV . 0 39 hm5C_associated_SNPs_16005 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:43292270-43292308
64251 chr10 128817063 128817063 1 + G A BLCA 128817082 + 128817062 128817102 41 GGCTCGAAAAACAGGGTTTCCGGAGATAATCATGCCTGGTA GACTCGAAAAACAGGGTTTCCGGAGATAATCATGCCTGGTA < 41bp 1 0.484740252827364 1 0.893370032310486 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128817082 chr10:128817063 nonsynonymous SNV 0.898 3 2 hm5C_associated_SNPs_16007 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:128817057-128817084
64251 chr12 72274297 72274297 1 + C G BLCA 72274307 + 72274287 72274327 41 AGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACG AGAAAGAGGTGATCGAGGATCAGAACATCTGAACAGTTACG < 41bp 1 0.726057982155377 1 0.639172673225403 experiment 0.547884035689246 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72274307 chr12:72274297 nonsynonymous SNV 0.462 0 11 hm5C_associated_SNPs_16008 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72274235-72274335
64251 chr16 3021896 3021896 1 + G A BLCA 3021876 + 3021856 3021896 41 GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCG GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCA < 41bp 1 0.108286030593901 1 0.0826186239719391 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021876 chr16:3021896 nonsynonymous SNV 0.592 4 41 hm5C_associated_SNPs_16010 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:3021883-3021932
64251 chr11 14865508 14865508 1 + C T BLCA 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGTCA < 41bp 1 0.399431290755441 1 0.802390217781067 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865508 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_16011 0 0 2 GRWD1 POSTAR2 ENCODE chr11:14865417-14865522
64251 chr11 20139724 20139724 1 + C T BLCA 20139725 + 20139705 20139745 41 GGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT GGCAGCCAACTACTCCAGCTCCCAGAGCTATGACAGCGACT < 41bp 1 0.0794162541179236 1 0.356244325637817 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control NAV2 ENSG00000166833 CDS Human protein_coding chr11:20139725 chr11:20139724 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_16012 0 0 2 LIN28B POSTAR2 ENCODE chr11:20139681-20139749
64251 chr1 12317073 12317073 1 + C G BLCA 12317053 + 12317033 12317073 41 CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTCCTC CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTCCTG < 41bp 1 0.246432570094151 1 0.388894021511078 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12317053 chr1:12317073 synonymous SNV . 0 41 hm5C_associated_SNPs_16013 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:12317050-12317077
64251 chrX 73045990 73045990 1 - C G BLCA 73045992 - 73045972 73046012 41 TACACAGATGTGCCAGACTTCTGAGAAGCACCTGCCAGCAA TACACAGATGTGCCAGACTTCTCAGAAGCACCTGCCAGCAA < 41bp 1 0.490166460998295 1 0.599884569644928 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045992 chrX:73045990 . . 0 23 hm5C_associated_SNPs_16015 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045990 73045990 1 - C G BLCA 73045995 - 73045975 73046015 41 AAATACACAGATGTGCCAGACTTCTGAGAAGCACCTGCCAG AAATACACAGATGTGCCAGACTTCTCAGAAGCACCTGCCAG < 41bp 1 0.0893760379894214 1 0.0653793513774872 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045995 chrX:73045990 . . 0 26 hm5C_associated_SNPs_16016 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045990 73045990 1 - C G BLCA 73045999 - 73045979 73046019 41 CAAGAAATACACAGATGTGCCAGACTTCTGAGAAGCACCTG CAAGAAATACACAGATGTGCCAGACTTCTCAGAAGCACCTG < 41bp 1 0.189513519183685 1 0.462401658296585 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045999 chrX:73045990 . . 0 30 hm5C_associated_SNPs_16017 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045990 73045990 1 - C G BLCA 73046010 - 73045990 73046030 41 GAAGAATTAGACAAGAAATACACAGATGTGCCAGACTTCTG GAAGAATTAGACAAGAAATACACAGATGTGCCAGACTTCTC < 41bp 1 0.269749393538801 1 0.0749547183513641 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046010 chrX:73045990 . . 0 41 hm5C_associated_SNPs_16018 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr11 67378016 67378016 1 + G A BLCA 67378025 + 67378005 67378045 41 AAGCCCCGCCTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA AAGCCCCGCCTAAAGCCCCCCTTCCCCGCAGACGTGGGTAA < 41bp 1 0.0933790167835557 1 0.317881375551224 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378025 chr11:67378016 synonymous SNV . 0 12 hm5C_associated_SNPs_16019 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:67378015-67378016
64251 chr22 41742178 41742178 1 + A G BLCA 41742194 + 41742174 41742214 41 CTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT CTGAGGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT < 41bp 1 0.351223403719557 1 0.110107630491257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41742194 chr22:41742178 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_16020 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:41742176-41742208
64251 chr10 105174887 105174887 1 + C G BLCA 105174899 + 105174879 105174919 41 TACCACATCGGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT TACCACATGGGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT < 41bp 1 0.551015556773272 1 0.711806654930115 experiment 0.897968886453455 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105174899 chr10:105174887 nonsynonymous SNV 0.010 0 9 hm5C_associated_SNPs_16021 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:105174863-105174888
64251 chr13 77574706 77574706 1 + G C BLCA 77574692 + 77574672 77574712 41 AGCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGATTCCT AGCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTCATTCCT < 41bp 1 0.309890214014537 1 0.39833003282547 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77574692 chr13:77574706 nonsynonymous SNV 0.981 4 35 hm5C_associated_SNPs_16022 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr13:77574696-77574724
64251 chr11 126279195 126279195 1 + C T BLCA 126279193 + 126279173 126279213 41 GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCAATCCT GTTTCTGGAAACAGCCTCCCCTTATCTGGGATGTCAATCCT < 41bp 1 0.148791243076098 1 0.0457126498222351 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126279193 chr11:126279195 synonymous SNV . 0 23 hm5C_associated_SNPs_16027 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:126279177-126279213
64251 chr22 21965299 21965299 1 + G T BLCA 21965319 + 21965299 21965339 41 GAAAACTGGAAGCCAGCAACCAAAACCGACCAAGGTAAGAC TAAAACTGGAAGCCAGCAACCAAAACCGACCAAGGTAAGAC < 41bp 1 0.605857707831504 1 0.782130002975464 experiment 0.788284584336993 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2L3 ENSG00000185651 CDS Human protein_coding chr22:21965319 chr22:21965299 stopgain 1.000 1 1 hm5C_associated_SNPs_16028 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr22:21965257-21965299
64251 chr8 145537210 145537210 1 + G A BLCA 145537206 + 145537186 145537226 41 TCCCGGGCCAGGAATGAGCTCAGTGACCACTTGGATGCTAT TCCCGGGCCAGGAATGAGCTCAGTAACCACTTGGATGCTAT < 41bp 1 0.40886730297301 1 0.202686965465546 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537206 chr8:145537210 nonsynonymous SNV 0.891 1 25 hm5C_associated_SNPs_16030 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:145537197-145537260
64251 chr22 38201748 38201748 1 + C T BLCA 38201755 + 38201735 38201775 41 GAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGCGCCT GAGAACGCTGACTTGCAGATCAAGTTGTCCATCAAGCGCCT < 41bp 1 0.512478272125613 1 0.245113521814346 experiment 0.975043455748774 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201755 chr22:38201748 nonsynonymous SNV 0.996 0 14 hm5C_associated_SNPs_16031 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:38201725-38201749
64251 chr16 845787 845787 1 + G C BLCA 845778 + 845758 845798 41 GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC GCCGGGCCACGCCCCAGGCCCTGCTCCTCCATGCCCTCTGC < 41bp 1 0.427126962304844 1 0.0406796932220459 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845778 chr16:845787 nonsynonymous SNV 0.006 4 30 hm5C_associated_SNPs_16032 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:845748-845787
64251 chr12 51449971 51449971 1 + G C BLCA 51449969 + 51449949 51449989 41 CAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTAAC CAATACATGATATCTTGGCTCTCAGAGAGTGTTTCTCTAAC < 41bp 1 0.553815754433118 1 0.195650696754456 experiment 0.892368491133764 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449969 chr12:51449971 synonymous SNV . 0 23 hm5C_associated_SNPs_16033 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:51449952-51449980
64251 chr8 21844747 21844747 1 + G A BLCA 21844767 + 21844747 21844787 41 GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG ATAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG < 41bp 1 0.327786803990291 1 0.46998855471611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844767 chr8:21844747 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_16034 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:21844714-21844757
64251 chr15 48626677 48626677 1 + G A BLCA 48626680 + 48626660 48626700 41 ACGGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAG ACGGACATTCAGATAGCACTCCCTTCTGGGTGTTATGGAAG < 41bp 1 0.15373374602321 1 0.0906699895858765 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626680 chr15:48626677 synonymous SNV . 0 18 hm5C_associated_SNPs_16035 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:48626634-48626679
64251 chr15 48626677 48626677 1 + G A BLCA 48626682 + 48626662 48626702 41 GGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAG GGACATTCAGATAGCACTCCCTTCTGGGTGTTATGGAAGAG < 41bp 1 0.205977749613946 1 0.111676067113876 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626682 chr15:48626677 synonymous SNV . 0 16 hm5C_associated_SNPs_16036 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:48626634-48626679
64251 chr15 48626677 48626677 1 + G A BLCA 48626685 + 48626665 48626705 41 CATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAGTGG CATTCAGATAGCACTCCCTTCTGGGTGTTATGGAAGAGTGG < 41bp 1 0.673305016286378 1 0.74135810136795 experiment 0.653389967427245 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626685 chr15:48626677 synonymous SNV . 0 13 hm5C_associated_SNPs_16037 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:48626634-48626679
64251 chr17 34958603 34958603 1 + G C BLCA 34958622 + 34958602 34958642 41 GGAGGTGAGCCCGCTGCGGCCCCGGCCTTGGAGAGAGGCCG GCAGGTGAGCCCGCTGCGGCCCCGGCCTTGGAGAGAGGCCG < 41bp 1 0.494912590267771 1 0.425182163715363 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRM1 ENSG00000129282 CDS Human other chr17:34958622 chr17:34958603 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_16038 0 0 1 RBM15 POSTAR2 ENCODE chr17:34958579-34958637
64251 chr17 34958603 34958603 1 + G C BLCA 34958623 + 34958603 34958643 41 GAGGTGAGCCCGCTGCGGCCCCGGCCTTGGAGAGAGGCCGG CAGGTGAGCCCGCTGCGGCCCCGGCCTTGGAGAGAGGCCGG < 41bp 1 0.347036992960653 1 0.312369823455811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRM1 ENSG00000129282 CDS Human other chr17:34958623 chr17:34958603 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_16039 0 0 1 RBM15 POSTAR2 ENCODE chr17:34958579-34958637
64251 chr2 47639699 47639699 1 + G T BLCA 47639697 + 47639677 47639717 41 TATTGCCAGAAATGGAGAATCAGGTACATGGATTATAAATG TATTGCCAGAAATGGAGAATCATGTACATGGATTATAAATG < 41bp 1 0.145207495076188 1 0.0758692026138306 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSH2 ENSG00000095002 CDS Human protein_coding chr2:47639697 chr2:47639699 nonsynonymous SNV 0.932 5 23 hm5C_associated_SNPs_16041 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:47639672-47639704
64251 chr6 31918694 31918694 1 + C A BLCA 31918695 + 31918675 31918715 41 AACTCGAGCTTTGAGGCTTCCTCCAACTACCACTTGCCAGC AACTCGAGCTTTGAGGCTTACTCCAACTACCACTTGCCAGC < 41bp 1 0.746077214000423 1 0.859045684337616 experiment 0.507845571999154 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31918695 chr6:31918694 nonsynonymous SNV 0.904 4 20 hm5C_associated_SNPs_16042 0 0 1 SND1 POSTAR2 ENCODE chr6:31918645-31918704
64251 chr3 184106402 184106402 1 + G A BLCA 184106407 + 184106387 184106427 41 CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC CCCACCCCCAGCTGGAGGACCCCATGCAGGCTGATGGGCCC < 41bp 1 0.181192939957486 1 0.212194859981537 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184106407 chr3:184106402 nonsynonymous SNV 0.964 0 16 hm5C_associated_SNPs_16043 0 0 6 BUD13 POSTAR2 ENCODE chr3:184106371-184106476
64251 chr2 109104177 109104177 1 + C T BLCA 109104161 + 109104141 109104181 41 TTTAAATGTTATAGGCAGAACAAGCTACTGTAACCTCTGAA TTTAAATGTTATAGGCAGAACAAGCTACTGTAACCTTTGAA < 41bp 1 0.179069450600545 1 0.355598747730255 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCC2 ENSG00000135968 CDS Human protein_coding chr2:109104161 chr2:109104177 nonsynonymous SNV 0.996 4 37 hm5C_associated_SNPs_16045 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:109104160-109104187
64251 chr13 76124114 76124114 1 + C T BLCA 76124116 + 76124096 76124136 41 TCTGTTTCGTTTTCAGGTCACCAACCAGGTGAGTGAGGTGT TCTGTTTCGTTTTCAGGTTACCAACCAGGTGAGTGAGGTGT < 41bp 1 0.203656877492407 1 0.103965044021606 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UCHL3 ENSG00000118939 CDS Human protein_coding chr13:76124116 chr13:76124114 synonymous SNV . 0 19 hm5C_associated_SNPs_16046 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:76124076-76124114
64251 chr13 76124114 76124114 1 + C T BLCA 76124117 + 76124097 76124137 41 CTGTTTCGTTTTCAGGTCACCAACCAGGTGAGTGAGGTGTC CTGTTTCGTTTTCAGGTTACCAACCAGGTGAGTGAGGTGTC < 41bp 1 0.459652091446004 1 0.256692230701447 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UCHL3 ENSG00000118939 CDS Human protein_coding chr13:76124117 chr13:76124114 synonymous SNV . 0 18 hm5C_associated_SNPs_16047 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:76124076-76124114
64251 chr2 219679343 219679343 1 + C T BLCA 219679360 + 219679340 219679380 41 CCCCACCGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG CCCTACCGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG < 41bp 1 0.49020668532601 1 0.292372673749924 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679360 chr2:219679343 nonsynonymous SNV 0.402 0 4 hm5C_associated_SNPs_16049 0 0 6 DDX55 POSTAR2 ENCODE chr2:219679273-219679352
64251 chr1 110456967 110456967 1 + G A BLCA 110456962 + 110456942 110456982 41 AGGTGTCGGAGTACTGTAGCCACATGATTGGGAGTGGACAC AGGTGTCGGAGTACTGTAGCCACATAATTGGGAGTGGACAC < 41bp 1 0.433354823567618 1 0.497323602437973 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110456962 chr1:110456967 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_16050 0 0 1 DDX3X POSTAR2 ENCODE chr1:110456890-110456999
64251 chr19 41770565 41770565 1 + G C BLCA 41770577 + 41770557 41770597 41 CCGACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAG CCGACGACCAACCGGGGCGACCCGGGCACATCAACGAGGAG < 41bp 1 0.415527158403482 1 0.261041343212128 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770577 chr19:41770565 nonsynonymous SNV 0.274 0 9 hm5C_associated_SNPs_16051 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr19 41770565 41770565 1 + G C BLCA 41770578 + 41770558 41770598 41 CGACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAGG CGACGACCAACCGGGGCGACCCGGGCACATCAACGAGGAGG < 41bp 1 0.58795065451481 1 0.481073260307312 experiment 0.824098690970381 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770578 chr19:41770565 nonsynonymous SNV 0.274 0 8 hm5C_associated_SNPs_16052 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr19 41770565 41770565 1 + G C BLCA 41770579 + 41770559 41770599 41 GACGACGAACCGGGGCGACCCGGGCACATCAACGAGGAGGT GACGACCAACCGGGGCGACCCGGGCACATCAACGAGGAGGT < 41bp 1 0.689746024850736 1 0.646933495998383 experiment 0.620507950298527 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41770579 chr19:41770565 nonsynonymous SNV 0.274 0 7 hm5C_associated_SNPs_16053 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:41770520-41770580
64251 chr3 49742439 49742439 1 + T C BLCA 49742448 + 49742428 49742468 41 GGCCCTGGCTGTTGGGGGGCCACTGCCCCTGCCCCGGCCCG GGCCCTGGCTGCTGGGGGGCCACTGCCCCTGCCCCGGCCCG < 41bp 1 0.431428241062459 1 0.494230687618256 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742448 chr3:49742439 nonsynonymous SNV 0.209 0 12 hm5C_associated_SNPs_16054 0 0 4 DDX24 POSTAR2 ENCODE chr3:49742422-49742480
64251 chr17 4905823 4905823 1 + C G BLCA 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTGTCTGCGGGTCCGGGAGCACCCCATCCTGGG < 41bp 1 0.544004760116223 1 0.644052505493164 experiment 0.911990479767555 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905823 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_16056 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4905814-4905838
64251 chr11 44129413 44129413 1 + G T BLCA 44129403 + 44129383 44129423 41 GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA GGCATGTTTCAGTTTTGGCCCCATTCTATCTAGTCCTCAAA < 41bp 1 0.0339989835348033 1 0.0297065377235413 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129403 chr11:44129413 stopgain 0.999 1 31 hm5C_associated_SNPs_16057 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr11 44129413 44129413 1 + G T BLCA 44129404 + 44129384 44129424 41 GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT GCATGTTTCAGTTTTGGCCCCATTCTATCTAGTCCTCAAAT < 41bp 1 0.02783404277409 1 0.0577836632728577 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129404 chr11:44129413 stopgain 0.999 1 30 hm5C_associated_SNPs_16058 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr3 188242482 188242482 1 + G A BLCA 188242472 + 188242452 188242492 41 GGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCA GGGGAATCCCGGAGGCAAGACACTTGAGGAAAGGCGCTCCA < 41bp 1 0.200770379493223 1 0.0378702878952026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPP ENSG00000145012 CDS Human protein_coding chr3:188242472 chr3:188242482 synonymous SNV . 0 31 hm5C_associated_SNPs_16060 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:188242466-188242487
64251 chr1 6505938 6505938 1 + C G BLCA 6505928 + 6505908 6505948 41 GCCTCCTGTAGGACCACAGGCAGCTGACATCTACATGCAGA GCCTCCTGTAGGACCACAGGCAGCTGACATGTACATGCAGA < 41bp 1 0.302837668077089 1 0.611524283885956 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESPN ENSG00000187017 CDS Human protein_coding chr1:6505928 chr1:6505938 nonsynonymous SNV 0.912 4 31 hm5C_associated_SNPs_16061 0 0 1 DDX24 POSTAR2 ENCODE chr1:6505890-6505952
64251 chr4 56230312 56230312 1 + G A BLCA 56230318 + 56230298 56230338 41 TACGAAGACTCTTCGAGTGCCTCTACGTCAGTGTCTTCTCC TACGAAGACTCTTCAAGTGCCTCTACGTCAGTGTCTTCTCC < 41bp 1 0.507874137293578 1 0.134117424488068 experiment 0.984251725412844 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56230318 chr4:56230312 nonsynonymous SNV 0.656 4 15 hm5C_associated_SNPs_16062 1 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:56230304-56230324
64251 chr3 128631370 128631370 1 + G A BLCA 128631356 + 128631336 128631376 41 CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATGAGCAGA CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATAAGCAGA < 41bp 1 0.511157054362027 1 0.560437440872192 experiment 0.977685891275946 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128631356 chr3:128631370 nonsynonymous SNV 0.998 1 35 hm5C_associated_SNPs_16063 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128631362-128631394
64251 chr7 2686589 2686589 1 + G A BLCA 2686570 + 2686550 2686590 41 TTCTACTCCTTCTGGCTGTGCTGCCGGCGGCGCAAGAGCGA TTCTACTCCTTCTGGCTGTGCTGCCGGCGGCGCAAGAGCAA < 41bp 1 0.379512565749068 1 0.385442107915878 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686570 chr7:2686589 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_16064 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2686580-2686600
64251 chr11 118369132 118369132 1 + C T BLCA 118369113 + 118369093 118369133 41 ATTCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTCA ATTCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTTA < 41bp 1 0.0241337783073291 1 0.198178499937057 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118369113 chr11:118369132 synonymous SNV . 0 40 hm5C_associated_SNPs_16065 0 0 3 EIF3H POSTAR2 ENCODE chr11:118369086-118369138
64251 chr12 56347534 56347534 1 + C A BLCA 56347519 + 56347499 56347539 41 ATGCTCATGGGCCCACCCCCCCGCTCCACCAATTTCTTTGG ATGCTCATGGGCCCACCCCCCCGCTCCACCAATTTATTTGG < 41bp 1 0.335984233891604 1 0.515404343605042 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DGKA ENSG00000065357 CDS Human protein_coding chr12:56347519 chr12:56347534 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_16066 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56347534-56347557
64251 chrX 70360539 70360539 1 + G A BLCA 70360532 + 70360512 70360552 41 ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCG ACCCATGATAAGTACCATGACTCCAATAAGTGCCCAGGGCG < 41bp 1 0.726100723576922 1 0.912848234176636 experiment 0.547798552846156 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout MED12 ENSG00000184634 CDS Human protein_coding chrX:70360532 chrX:70360539 nonsynonymous SNV 0.985 0 28 hm5C_associated_SNPs_16067 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:70360523-70360557
64251 chr6 44374146 44374146 1 + C T BLCA 44374158 + 44374138 44374178 41 TCTTCAAACTAGTGGTGTTTCTGAATTTACTAAAAAGAGAA TCTTCAAATTAGTGGTGTTTCTGAATTTACTAAAAAGAGAA < 41bp 1 0.765108964792738 1 0.56145703792572 experiment 0.469782070414525 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC5L ENSG00000096401 CDS Human protein_coding chr6:44374158 chr6:44374146 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_16083 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:44374121-44374160
64251 chr10 104129979 104129979 1 + G C BLCA 104129996 + 104129976 104130016 41 CTGGAGTCACTACAGGAGCTCATGAAGGTAAAGGATGAAGA CTGCAGTCACTACAGGAGCTCATGAAGGTAAAGGATGAAGA < 41bp 1 0.219337758582516 1 0.184021890163422 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129996 chr10:104129979 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_16084 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:104129945-104129983
64251 chr6 33411122 33411122 1 + C T BLCA 33411133 + 33411113 33411153 41 GAACCCTCTCTTCCACATGGCTGCTGATGGGCCAGGTCCCC GAACCCTCTTTTCCACATGGCTGCTGATGGGCCAGGTCCCC < 41bp 1 0.20012761879628 1 0.0216740965843201 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411133 chr6:33411122 synonymous SNV . 0 10 hm5C_associated_SNPs_16085 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33411094-33411137
64251 chr16 30953717 30953717 1 + C G BLCA 30953726 + 30953706 30953746 41 GCTGGTGCTCTCTGGCTGCTCCTGGCTCTCTGTCTCTGCCC GCTGGTGCTCTGTGGCTGCTCCTGGCTCTCTGTCTCTGCCC < 41bp 1 0.466028957996939 1 0.197158813476562 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30953726 chr16:30953717 nonsynonymous SNV 0.992 0 12 hm5C_associated_SNPs_16086 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30953701-30953739
64251 chr6 11575764 11575764 1 + C G BLCA 11575784 + 11575764 11575804 41 CTCCTTTTCAAGGATCCTCGCTACACTTTGAGGTTTCTGTG GTCCTTTTCAAGGATCCTCGCTACACTTTGAGGTTTCTGTG < 41bp 1 0.541414941955145 1 0.231324553489685 experiment 0.917170116089709 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM170B ENSG00000205269 CDS Human protein_coding chr6:11575784 chr6:11575764 nonsynonymous SNV 0.996 4 1 hm5C_associated_SNPs_16087 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:11575741-11575776
64251 chr8 145727029 145727029 1 + C T BLCA 145727024 + 145727004 145727044 41 GCTGAGCCCCCTGGACAGCACCACCCCCCACACCCTGGTCC GCTGAGCCCCCTGGACAGCACCACCTCCCACACCCTGGTCC < 41bp 1 0.164558990346557 1 0.0251566171646118 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727024 chr8:145727029 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_16088 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr7 43664257 43664257 1 + C A BLCA 43664244 + 43664224 43664264 41 TCCAAGAAGGTCATTCTGTGCCTGAAATTAATTCGGATACC TCCAAGAAGGTCATTCTGTGCCTGAAATTAATTAGGATACC < 41bp 1 0.341803248029603 1 0.241537153720856 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control STK17A ENSG00000164543 CDS Human protein_coding chr7:43664244 chr7:43664257 stopgain 0.917 0 34 hm5C_associated_SNPs_16089 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr7:43664253-43664269
64251 chr5 92923700 92923700 1 + G T BLCA 92923717 + 92923697 92923737 41 AACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT AACTGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT < 41bp 1 0.335428480239083 1 0.36481511592865 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923717 chr5:92923700 nonsynonymous SNV 0.998 1 4 hm5C_associated_SNPs_16090 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr5:92923700-92923720
64251 chr19 14580222 14580222 1 + C T BLCA 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTT < 41bp 1 0.0384741283246342 1 0.0937943756580353 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580222 synonymous SNV . 0 41 hm5C_associated_SNPs_16092 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:14580209-14580230
64251 chr19 14580222 14580222 1 + C T BLCA 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTTG < 41bp 1 0.0229249341712729 1 0.0640327930450439 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580222 synonymous SNV . 0 40 hm5C_associated_SNPs_16093 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:14580209-14580230
64251 chr19 14580222 14580222 1 + C T BLCA 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTTGGCTG < 41bp 1 0.396508386240895 1 0.672582387924194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580222 synonymous SNV . 0 36 hm5C_associated_SNPs_16094 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:14580209-14580230
64251 chr11 85977208 85977208 1 + G C BLCA 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATCATGAA < 41bp 1 0.179394170147215 1 0.130336463451385 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977208 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_16095 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:85977184-85977209
64251 chr21 45746744 45746744 1 + G A BLCA 45746749 + 45746729 45746769 41 TGGACAAGGGCTTCTGAGGCCAGCCATGCCCACGCCCCTCC TGGACAAGGGCTTCTAAGGCCAGCCATGCCCACGCCCCTCC < 41bp 1 0.672496004769122 1 0.197154551744461 experiment 0.655007990461756 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45746749 chr21:45746744 synonymous SNV . 0 16 hm5C_associated_SNPs_16096 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr21:45746717-45746751
64251 chr11 85977209 85977209 1 + A T BLCA 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGTTGAA < 41bp 1 0.163726994972108 1 0.0997744798660278 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977209 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_16097 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:85977184-85977209
64251 chr5 176863486 176863486 1 + C T BLCA 176863468 + 176863448 176863488 41 GAGGTGAAGGAGCACCCCCTCTTTAAGAAGCTGAACTTCAA GAGGTGAAGGAGCACCCCCTCTTTAAGAAGCTGAACTTTAA < 41bp 1 0.313296053644267 1 0.168404310941696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863468 chr5:176863486 synonymous SNV . 0 39 hm5C_associated_SNPs_16098 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:176863472-176863486
64251 chr10 73044510 73044510 1 + C T BLCA 73044490 + 73044470 73044510 41 CTCCCAGGCCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTC CTCCCAGGCCTGCGGGTGCGCGAGGTGCAGATCGAGGTGTT < 41bp 1 0.739900303415717 1 0.855061173439026 experiment 0.520199393168567 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73044490 chr10:73044510 nonsynonymous SNV 0.965 4 41 hm5C_associated_SNPs_16100 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr10:73044505-73044538
64251 chr11 9597625 9597625 1 + G C BLCA 9597628 + 9597608 9597648 41 GTGTCGTCGTAGAAAGAGAACGTATTGGAATGAGTAAGTCG GTGTCGTCGTAGAAAGACAACGTATTGGAATGAGTAAGTCG < 41bp 1 0.074860778965156 1 0.0902983248233795 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WEE1 ENSG00000166483 CDS Human protein_coding chr11:9597628 chr11:9597625 nonsynonymous SNV 0.965 1 18 hm5C_associated_SNPs_16101 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:9597570-9597632
64251 chr14 102484885 102484885 1 + A T BLCA 102484872 + 102484852 102484892 41 TACGGCACCTTCAACCGCGCCATGCTGAGGCTCATTCCATC TACGGCACCTTCAACCGCGCCATGCTGAGGCTCTTTCCATC < 41bp 1 0.0667666027231045 1 0.0738312005996704 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102484872 chr14:102484885 nonsynonymous SNV 0.633 2 34 hm5C_associated_SNPs_16102 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102484864-102484902
64251 chr2 32631587 32631587 1 + C T BLCA 32631577 + 32631557 32631597 41 TTGATTTAAGTGATGATTTACTGGAGGATTCAGACAGTGAA TTGATTTAAGTGATGATTTACTGGAGGATTTAGACAGTGAA < 41bp 1 0.284373992332005 1 0.728187680244446 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32631577 chr2:32631587 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_16103 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:32631565-32631591
64251 chr5 64082363 64082363 1 + C G BLCA 64082382 + 64082362 64082402 41 TCCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA TGCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA < 41bp 1 0.413649795483411 1 0.821614146232605 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64082382 chr5:64082363 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_16104 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:64082348-64082392
64251 chrX 15822263 15822263 1 + G C BLCA 15822264 + 15822244 15822284 41 AGGAACAATGGGAAGAACAGCAGAGGAAAGAGAGAGAAGAG AGGAACAATGGGAAGAACACCAGAGGAAAGAGAGAGAAGAG < 41bp 1 0.646814843461457 1 0.61371386051178 experiment 0.706370313077085 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15822264 chrX:15822263 nonsynonymous SNV 0.996 2 20 hm5C_associated_SNPs_16105 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221662 chrX:15822262-15822263
64251 chr12 109536302 109536302 1 + G A BLCA 109536312 + 109536292 109536332 41 CCTCGCCGCTGAGTGCCGAGCAGTTGGACCGGATCCAGAGG CCTCGCCGCTAAGTGCCGAGCAGTTGGACCGGATCCAGAGG < 41bp 1 0.504980173285952 1 0.416076898574829 experiment 0.990039653428096 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109536312 chr12:109536302 synonymous SNV . 0 11 hm5C_associated_SNPs_16106 0 0 20 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109536257-109536302
64251 chr19 47491290 47491290 1 + G C BLCA 47491274 + 47491254 47491294 41 ACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTGAGAT ACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTCAGAT < 41bp 1 0.57616840091156 1 0.459208875894547 experiment 0.84766319817688 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491274 chr19:47491290 nonsynonymous SNV 0.938 1 37 hm5C_associated_SNPs_16107 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 47491290 47491290 1 + G C BLCA 47491283 + 47491263 47491303 41 ATCTACCGGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCT ATCTACCGGGTCAGCGGGAACAAGTCTCAGATGGAGAGTCT < 41bp 1 0.350783616332153 1 0.284594416618347 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491283 chr19:47491290 nonsynonymous SNV 0.938 1 28 hm5C_associated_SNPs_16108 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr14 53173937 53173937 1 + C A BLCA 53173926 + 53173906 53173946 41 CCGGCATCCCCTATGAGAGACGGCTTCTCATCATGGCGGAC CCGGCATCCCCTATGAGAGACGGCTTCTCATAATGGCGGAC < 41bp 1 0.559744769238787 1 0.159252732992172 experiment 0.880510461522426 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53173926 chr14:53173937 synonymous SNV . 0 32 hm5C_associated_SNPs_16109 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:53173920-53173940
64251 chr20 279103 279103 1 + G T BLCA 279121 + 279101 279141 41 GGGATCTGGACCGGGGAGTACAAATGCGAGATCGAGCTGCG GGTATCTGGACCGGGGAGTACAAATGCGAGATCGAGCTGCG < 41bp 1 0.591229843500593 1 0.525008916854858 experiment 0.817540312998813 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC3 ENSG00000177764 CDS Human other chr20:279121 chr20:279103 synonymous SNV . 0 3 hm5C_associated_SNPs_16112 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:279065-279139
64251 chr15 99459919 99459919 1 + A C BLCA 99459934 + 99459914 99459954 41 CAGGAAGTATGCCGACGGCACCATCGACATTGAGGAGGTCA CAGGACGTATGCCGACGGCACCATCGACATTGAGGAGGTCA < 41bp 1 0.00960147416879578 1 0.0546481907367706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99459934 chr15:99459919 nonsynonymous SNV 0.989 1 6 hm5C_associated_SNPs_16115 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:99459900-99459930
64251 chr11 46895138 46895138 1 - T C BLCA 46895143 - 46895123 46895163 41 ACACTGGGCTCTCCCCAAGGCGAGCAGACCTGAACGGCAGC ACACTGGGCTCTCCCCAAGGCGAGCGGACCTGAACGGCAGC < 41bp 1 0.256899559928907 1 0.668308734893799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP4 ENSG00000134569 CDS Human protein_coding chr11:46895143 chr11:46895138 synonymous SNV . 0 26 hm5C_associated_SNPs_16117 0 0 1 SF3B4 POSTAR2 ENCODE chr11:46895112-46895193
64251 chr8 145697774 145697774 1 + C T BLCA 145697780 + 145697760 145697800 41 GGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG GGGCCTCCCGAGCGTCTGGCCGTGAGGCAGGGCCCAGAAGG < 41bp 1 0.714372700814768 1 0.602714717388153 experiment 0.571254598370464 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145697780 chr8:145697774 synonymous SNV . 0 15 hm5C_associated_SNPs_16118 0 0 4 LSM11 POSTAR2 ENCODE chr8:145697742-145697786
64251 chr5 110097170 110097170 1 + A T BLCA 110097160 + 110097140 110097180 41 TGTGCAGAGTATGTTGGATGCTTATTTTCCAGAACTTATTG TGTGCAGAGTATGTTGGATGCTTATTTTCCTGAACTTATTG < 41bp 1 0.251738903103125 1 0.0464199483394623 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097160 chr5:110097170 synonymous SNV . 0 31 hm5C_associated_SNPs_16119 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr7 91981884 91981884 1 + G T BLCA 91981887 + 91981867 91981907 41 AGGGTCAAATACATCTGGATCTGATACACTCAGCTTCCCAT AGGGTCAAATACATCTGTATCTGATACACTCAGCTTCCCAT < 41bp 1 0.367405534334521 1 0.0640631020069122 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91981887 chr7:91981884 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_16120 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:91981870-91981893
64251 chr1 26885394 26885394 1 + G T BLCA 26885380 + 26885360 26885400 41 GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCTTGCCCC < 41bp 1 0.772253012055242 1 0.598769545555115 experiment 0.455493975889516 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885380 chr1:26885394 nonsynonymous SNV 0.357 0 35 hm5C_associated_SNPs_16122 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr16 90028237 90028237 1 + C T BLCA 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACGACCTGGCTGTGATCCCTGCATGCGTTGTACACAA < 41bp 1 0.405692750381517 1 0.17419508099556 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028237 nonsynonymous SNV 0.106 4 28 hm5C_associated_SNPs_16123 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr16 90028237 90028237 1 + C T BLCA 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACGACCTGGCTGTGATCCCTGCATGCGTTGTACACAAC < 41bp 1 0.143207807037368 1 0.208404570817947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028237 nonsynonymous SNV 0.106 4 27 hm5C_associated_SNPs_16124 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr4 123260523 123260523 1 + G C BLCA 123260543 + 123260523 123260563 41 GAGTGGAACAAAGACTTCTGCTAGCAAAACTGGAATACCAG CAGTGGAACAAAGACTTCTGCTAGCAAAACTGGAATACCAG < 41bp 1 0.112176000887359 1 0.357998549938202 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123260543 chr4:123260523 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_16125 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:123260521-123260552
64251 chr16 31131792 31131792 1 + G A BLCA 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTGAGCGCAAGATCACTCACAACCAAAAGCGCAA < 41bp 1 0.220509585604551 1 0.0524667799472809 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131792 nonsynonymous SNV 0.998 4 26 hm5C_associated_SNPs_16126 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr16:31131780-31131800
64251 chr16 2225896 2225896 1 + A G BLCA 2225897 + 2225877 2225917 41 ACGTCTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATCA ACGTCTGGTGGCAGCGTCTGCTCCATTGCTGTGACAAATCA < 41bp 1 0.743637118836033 1 0.895953774452209 experiment 0.512725762327934 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TRAF7 ENSG00000131653 CDS Human protein_coding chr16:2225897 chr16:2225896 nonsynonymous SNV 0.992 4 20 hm5C_associated_SNPs_16127 0 0 4 FMR1 POSTAR2 ENCODE chr16:2225835-2225915
64251 chr11 46397494 46397494 1 + G T BLCA 46397500 + 46397480 46397520 41 AAGGAGCAGCTCAAGGAGGCCTGTGAGTGCGGTGGGGCGGC AAGGAGCAGCTCAATGAGGCCTGTGAGTGCGGTGGGGCGGC < 41bp 1 0.280068369183867 1 0.196340352296829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46397500 chr11:46397494 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_16128 0 0 1 PPIG POSTAR2 ENCODE chr11:46397457-46397502
64251 chr22 23438386 23438386 1 + T C BLCA 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAC < 41bp 1 0.238860630328761 1 0.0647713541984558 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438386 synonymous SNV . 0 41 hm5C_associated_SNPs_16129 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr9 133506081 133506081 1 + C T BLCA 133506078 + 133506058 133506098 41 CGTGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACCCCA CGTGGAGCTTCAGAGGAACCCCCTTCCCAACAGCGACCCCA < 41bp 1 0.151981227461064 1 0.0907883942127228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133506078 chr9:133506081 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_16133 0 0 5 METAP2 POSTAR2 ENCODE chr9:133506014-133506155
64251 chr9 133506081 133506081 1 + C T BLCA 133506080 + 133506060 133506100 41 TGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACCCCAAC TGGAGCTTCAGAGGAACCCCCTTCCCAACAGCGACCCCAAC < 41bp 1 0.104386420986228 1 0.478390276432037 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133506080 chr9:133506081 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_16134 0 0 5 METAP2 POSTAR2 ENCODE chr9:133506014-133506155
64251 chrX 102632754 102632754 1 + G T BLCA 102632743 + 102632723 102632763 41 GACCATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCC GACCATCATGATGAATTTTGCCTTATGCCTTTACTCCTGCC < 41bp 1 0.154597364109763 1 0.0567388832569122 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632743 chrX:102632754 stoploss 0.976 0 32 hm5C_associated_SNPs_16135 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632754 102632754 1 + G T BLCA 102632744 + 102632724 102632764 41 ACCATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCCA ACCATCATGATGAATTTTGCCTTATGCCTTTACTCCTGCCA < 41bp 1 0.212978094878137 1 0.0410113334655762 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632744 chrX:102632754 stoploss 0.976 0 31 hm5C_associated_SNPs_16136 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632754 102632754 1 + G T BLCA 102632750 + 102632730 102632770 41 ATGATGAATTTTGCCTTATGCCTTGACTCCTGCCATTTATC ATGATGAATTTTGCCTTATGCCTTTACTCCTGCCATTTATC < 41bp 1 0.0282623343917609 1 0.0157767236232758 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632750 chrX:102632754 stoploss 0.976 0 25 hm5C_associated_SNPs_16137 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632754 102632754 1 + G T BLCA 102632751 + 102632731 102632771 41 TGATGAATTTTGCCTTATGCCTTGACTCCTGCCATTTATCA TGATGAATTTTGCCTTATGCCTTTACTCCTGCCATTTATCA < 41bp 1 0.269658749048546 1 0.0449738800525665 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632751 chrX:102632754 stoploss 0.976 0 24 hm5C_associated_SNPs_16138 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632754 102632754 1 + G T BLCA 102632756 + 102632736 102632776 41 AATTTTGCCTTATGCCTTGACTCCTGCCATTTATCATGAGA AATTTTGCCTTATGCCTTTACTCCTGCCATTTATCATGAGA < 41bp 1 0.444071512162224 1 0.552429616451263 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632756 chrX:102632754 stoploss 0.976 0 19 hm5C_associated_SNPs_16139 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632754 102632754 1 + G T BLCA 102632763 + 102632743 102632783 41 CCTTATGCCTTGACTCCTGCCATTTATCATGAGATTAATAC CCTTATGCCTTTACTCCTGCCATTTATCATGAGATTAATAC < 41bp 1 0.078655748626686 1 0.011786013841629 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632763 chrX:102632754 stoploss 0.976 0 12 hm5C_associated_SNPs_16140 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr10 63850916 63850916 1 + C T BLCA 63850899 + 63850879 63850919 41 TCAGCCTTGGTCCCTGGGGCCAGCAAACAGCCACTCACCTC TCAGCCTTGGTCCCTGGGGCCAGCAAACAGCCACTCATCTC < 41bp 1 0.648294441534874 1 0.137760758399963 experiment 0.703411116930253 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID5B ENSG00000150347 CDS Human protein_coding chr10:63850899 chr10:63850916 nonsynonymous SNV 0.901 1 38 hm5C_associated_SNPs_16141 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:63850908-63850940
64251 chr10 95660964 95660964 1 + T C BLCA 95660981 + 95660961 95661001 41 CTGTATTAGGAGAGTGGAGTCTGCCTTACTGTGGGTTGGAC CTGCATTAGGAGAGTGGAGTCTGCCTTACTGTGGGTTGGAC < 41bp 1 0.528372859046336 1 0.1197529733181 experiment 0.943254281907328 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660981 chr10:95660964 nonsynonymous SNV 0.017 0 4 hm5C_associated_SNPs_16144 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:95660948-95660974
64251 chr11 65271270 65271270 1 + G T BLCA 65271255 + 65271235 65271275 41 TCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGG TCAGGATTTGAGCGGAAGAACGAATGTAACTTTAATGCAGG < 41bp 1 0.377843022357791 1 0.477019369602203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271255 chr11:65271270 . . 0 36 hm5C_associated_SNPs_16146 0 0 98 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr16 31131791 31131791 1 + C T BLCA 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTGAGCGCAAGATCACTTGCAACCAAAAGCGCAA < 41bp 1 0.353636189577647 1 0.0568622052669525 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131791 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_16147 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr16:31131780-31131800
64251 chr4 53579432 53579432 1 + G C BLCA 53579420 + 53579400 53579440 41 CAAAGCACCCTTTCCTGTGCCCTTTTAAGGTTGACCCAGTG CAAAGCACCCTTTCCTGTGCCCTTTTAAGGTTCACCCAGTG < 41bp 1 0.0111606782518584 1 0.0636335909366608 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579420 chr4:53579432 . . 0 33 hm5C_associated_SNPs_16149 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579432 53579432 1 + G C BLCA 53579434 + 53579414 53579454 41 CTGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAA CTGTGCCCTTTTAAGGTTCACCCAGTGCTTTAAGAGGCTAA < 41bp 1 0.109756899441979 1 0.217121511697769 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579434 chr4:53579432 . . 0 19 hm5C_associated_SNPs_16150 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579432 53579432 1 + G C BLCA 53579435 + 53579415 53579455 41 TGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAAC TGTGCCCTTTTAAGGTTCACCCAGTGCTTTAAGAGGCTAAC < 41bp 1 0.12405083306457 1 0.322538703680038 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579435 chr4:53579432 . . 0 18 hm5C_associated_SNPs_16151 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579432 53579432 1 + G C BLCA 53579436 + 53579416 53579456 41 GTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACA GTGCCCTTTTAAGGTTCACCCAGTGCTTTAAGAGGCTAACA < 41bp 1 0.273262266263794 1 0.753786087036133 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579436 chr4:53579432 . . 0 17 hm5C_associated_SNPs_16152 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579432 53579432 1 + G C BLCA 53579441 + 53579421 53579461 41 CTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACACAGAA CTTTTAAGGTTCACCCAGTGCTTTAAGAGGCTAACACAGAA < 41bp 1 0.213847551076513 1 0.193445473909378 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579441 chr4:53579432 . . 0 12 hm5C_associated_SNPs_16153 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579432 53579432 1 + G C BLCA 53579451 + 53579431 53579471 41 TGACCCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTA TCACCCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTA < 41bp 1 0.14628934725872 1 0.154235243797302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579451 chr4:53579432 . . 0 2 hm5C_associated_SNPs_16154 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr1 145507691 145507691 1 + G A BLCA 145507671 + 145507651 145507691 41 CTCGATCGAAGGCGAGATGGCGGACGTGCTAGATCTTCACG CTCGATCGAAGGCGAGATGGCGGACGTGCTAGATCTTCACA < 41bp 1 0.256189682008507 1 0.236435443162918 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RBM8A ENSG00000131795 CDS Human other chr1:145507671 chr1:145507691 nonsynonymous SNV . 0 41 hm5C_associated_SNPs_16155 0 0 4 GRWD1 POSTAR2 ENCODE chr1:145507676-145507735
64251 chr11 34129870 34129870 1 + G T BLCA 34129866 + 34129846 34129886 41 TCTTTGTTGTAGTTGGGGATCGAGGAAAAGATCAGGTATGG TCTTTGTTGTAGTTGGGGATCGAGTAAAAGATCAGGTATGG < 41bp 1 0.443488398200033 1 0.659066081047058 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129866 chr11:34129870 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_16156 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34129801-34129889
64251 chr7 2613111 2613111 1 + G T BLCA 2613101 + 2613081 2613121 41 GAAAAAGAAGATATGTATGACGAGATTATTGAGTTAAAGAA GAAAAAGAAGATATGTATGACGAGATTATTTAGTTAAAGAA < 41bp 1 0.451485693487053 1 0.636902093887329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IQCE ENSG00000106012 CDS Human protein_coding chr7:2613101 chr7:2613111 stopgain 0.998 1 31 hm5C_associated_SNPs_16157 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:2613090-2613114
64251 chr10 71146172 71146172 1 + G C BLCA 71146158 + 71146138 71146178 41 AGTCACCTTACTAAGGGATGCGATAAAAAGGAGAGAGGTAA AGTCACCTTACTAAGGGATGCGATAAAAAGGAGACAGGTAA < 41bp 1 0.195353366986867 1 0.337099730968475 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71146158 chr10:71146172 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_16158 0 0 3 FXR1 POSTAR2 ENCODE chr10:71146158-71146174
64251 chr16 70562835 70562835 1 + G T BLCA 70562823 + 70562803 70562843 41 CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCATACCCCAAC < 41bp 1 0.315995014379113 1 0.105692833662033 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70562823 chr16:70562835 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_16164 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:70562781-70562865
64251 chr19 36640691 36640691 1 + C T BLCA 36640710 + 36640690 36640730 41 TCACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTA TTACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTA < 41bp 1 0.204110756391372 1 0.220040678977966 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640710 chr19:36640691 synonymous SNV . 0 2 hm5C_associated_SNPs_16165 0 0 6 SF3A3 POSTAR2 ENCODE chr19:36640675-36640711
64251 chr19 36640691 36640691 1 + C T BLCA 36640711 + 36640691 36640731 41 CACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTAT TACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTAT < 41bp 1 0.379186053776925 1 0.176939874887466 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640711 chr19:36640691 synonymous SNV . 0 1 hm5C_associated_SNPs_16166 0 0 6 SF3A3 POSTAR2 ENCODE chr19:36640675-36640711
64251 chr11 48134415 48134415 1 + C G BLCA 48134404 + 48134384 48134424 41 CTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAA CTTTCATAAACAGAATGGAACTGGAACACCTGAGGTGGAAA < 41bp 1 0.559458068785244 1 0.464950799942017 experiment 0.881083862429512 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48134404 chr11:48134415 nonsynonymous SNV 0.001 0 32 hm5C_associated_SNPs_16167 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:48134382-48134420
64251 chr6 47576971 47576971 1 + C G BLCA 47576982 + 47576962 47577002 41 AAAAAAATTCCCTGGATGAACTTAGAGCCCAGATTATTGAA AAAAAAATTGCCTGGATGAACTTAGAGCCCAGATTATTGAA < 41bp 1 0.254212650729324 1 0.0883462429046631 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576982 chr6:47576971 nonsynonymous SNV 0.966 1 10 hm5C_associated_SNPs_16168 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr6 7581110 7581110 1 + C G BLCA 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTGTGAAA < 41bp 1 0.154303487312398 1 0.380129337310791 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581110 nonsynonymous SNV 0.936 0 36 hm5C_associated_SNPs_16169 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581110 7581110 1 + C G BLCA 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATATCACGCGGTTCCAGAACTCTGTGAAAGAGCT < 41bp 1 0.213077971838659 1 0.239558428525925 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581110 nonsynonymous SNV 0.936 0 31 hm5C_associated_SNPs_16170 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581110 7581110 1 + C G BLCA 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TCCAGAACTCTGTGAAAGAGCTGCAGCTGCAGAAGCAGAAG < 41bp 1 0.749106371126997 1 0.300089955329895 experiment 0.501787257746006 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581110 nonsynonymous SNV 0.936 0 12 hm5C_associated_SNPs_16171 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581110 7581110 1 + C G BLCA 7581125 + 7581105 7581145 41 ACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAGGTGGAA ACTCTGTGAAAGAGCTGCAGCTGCAGAAGCAGAAGGTGGAA < 41bp 1 0.723034435275333 1 0.555519759654999 experiment 0.553931129449335 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581125 chr6:7581110 nonsynonymous SNV 0.936 0 6 hm5C_associated_SNPs_16172 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr19 39219769 39219769 1 + C T BLCA 39219773 + 39219753 39219793 41 GACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAA GACCAGGTCATCGCTTTCTTCAAGGTCTTAGCAGGGGACAA < 41bp 1 0.720684720767423 1 0.935474634170532 experiment 0.558630558465155 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39219773 chr19:39219769 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_16174 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39219701-39219787
64251 chr3 52325046 52325046 1 + G A BLCA 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGGAGGACAACCTCCCGGACCGCAATGCGCTGCGGG < 41bp 1 0.559232745302123 1 0.771599769592285 experiment 0.881534509395755 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325046 nonsynonymous SNV 0.020 2 29 hm5C_associated_SNPs_16175 0 0 6 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr11 118267074 118267074 1 + G C BLCA 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CCCCTCACCATGGACCACATCCGGCCAAACACAGAACTAAA < 41bp 1 0.227895985859107 1 0.382634222507477 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267074 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_16176 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118267033-118267106
64251 chr22 38352817 38352817 1 + G A BLCA 38352823 + 38352803 38352843 41 ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCC ATGTGGAGGAGGATAAAGGGCTAGATGACTTGGAGAATGCC < 41bp 1 0.742136155034606 1 0.433974623680115 experiment 0.515727689930789 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352823 chr22:38352817 nonsynonymous SNV 0.998 1 15 hm5C_associated_SNPs_16177 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr22 38352817 38352817 1 + G A BLCA 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT GAGGATAAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT < 41bp 1 0.533975321062728 1 0.16255784034729 experiment 0.932049357874545 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352817 nonsynonymous SNV 0.998 1 7 hm5C_associated_SNPs_16178 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr17 4905368 4905368 1 + C G BLCA 4905366 + 4905346 4905386 41 CCCTCCAGCTCTGTGAGGACCTCTTCTCTCGCGTTAGTGAG CCCTCCAGCTCTGTGAGGACCTGTTCTCTCGCGTTAGTGAG < 41bp 1 0.110617687435309 1 0.0479413866996765 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905366 chr17:4905368 synonymous SNV . 0 23 hm5C_associated_SNPs_16180 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:4905360-4905380
64251 chr6 155154524 155154524 1 + A G BLCA 155154525 + 155154505 155154545 41 AAGCACAGAAACTGAGGGGACATAATCATCACTCAGTAGGT AAGCACAGAAACTGAGGGGGCATAATCATCACTCAGTAGGT < 41bp 1 0.178220531230103 1 0.160979986190796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155154525 chr6:155154524 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_16181 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:155154450-155154525
64251 chr4 107268795 107268795 1 + G A BLCA 107268786 + 107268766 107268806 41 GCTACATACAAAGGAGTTCCCTTTGAGGTGAAAGGGAAGGG GCTACATACAAAGGAGTTCCCTTTGAGGTAAAAGGGAAGGG < 41bp 1 0.271334094396881 1 0.152696460485458 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107268786 chr4:107268795 synonymous SNV . 0 30 hm5C_associated_SNPs_16182 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr4:107268759-107268795
64251 chr17 37360818 37360818 1 + C G BLCA 37360801 + 37360781 37360821 41 CCAGGCTGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCA CCAGGCTGAGGCCCGCAGGTCTAAGACCAAGGAAGCAGGCA < 41bp 1 0.460592299838554 1 0.282685548067093 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360801 chr17:37360818 nonsynonymous SNV 0.996 2 38 hm5C_associated_SNPs_16183 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360818 37360818 1 + C G BLCA 37360807 + 37360787 37360827 41 TGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCC TGAGGCCCGCAGGTCTAAGACCAAGGAAGCAGGCAAGCGCC < 41bp 1 0.550193005515926 1 0.44643759727478 experiment 0.899613988968148 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360807 chr17:37360818 nonsynonymous SNV 0.996 2 32 hm5C_associated_SNPs_16184 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360818 37360818 1 + C G BLCA 37360808 + 37360788 37360828 41 GAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCCG GAGGCCCGCAGGTCTAAGACCAAGGAAGCAGGCAAGCGCCG < 41bp 1 0.756973523333469 1 0.824227273464203 experiment 0.486052953333062 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360808 chr17:37360818 nonsynonymous SNV 0.996 2 31 hm5C_associated_SNPs_16185 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360818 37360818 1 + C G BLCA 37360816 + 37360796 37360836 41 CAGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGC CAGGTCTAAGACCAAGGAAGCAGGCAAGCGCCGTGAAGAGC < 41bp 1 0.503564287156152 1 0.691018462181091 experiment 0.992871425687697 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360816 chr17:37360818 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_16186 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360818 37360818 1 + C G BLCA 37360820 + 37360800 37360840 41 TCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGCCT TCTAAGACCAAGGAAGCAGGCAAGCGCCGTGAAGAGCGCCT < 41bp 1 0.605153054242264 1 0.695806801319122 experiment 0.789693891515473 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360820 chr17:37360818 nonsynonymous SNV 0.996 2 19 hm5C_associated_SNPs_16187 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr2 3628398 3628398 1 + G A BLCA 3628408 + 3628388 3628428 41 CTTGTAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCA CTTGTAGGTTAAAACTTTTTCTGGTGTCTATAAGAAGCTCA < 41bp 1 0.702819094312326 1 0.146905452013016 experiment 0.594361811375348 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3628408 chr2:3628398 nonsynonymous SNV 0.997 2 11 hm5C_associated_SNPs_16188 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr2:3628215-3628402
64251 chr12 113730863 113730863 1 + G C BLCA 113730854 + 113730834 113730874 41 GTCACCAGGCTGCTGGAGACCCTCTCCCAGATGGAGAGATA GTCACCAGGCTGCTGGAGACCCTCTCCCACATGGAGAGATA < 41bp 1 0.0971936389780022 1 0.0482022166252136 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113730854 chr12:113730863 nonsynonymous SNV 0.998 0 30 hm5C_associated_SNPs_16189 0 0 1 PPIG POSTAR2 ENCODE chr12:113730737-113730863
64251 chr5 159437854 159437854 1 + G A BLCA 159437849 + 159437829 159437869 41 AGAACTGGAAAAAAACATGTCGGATGAAGAGAAACAGGTAA AGAACTGGAAAAAAACATGTCGGATAAAGAGAAACAGGTAA < 41bp 1 0.421437457085392 1 0.442351311445236 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437849 chr5:159437854 nonsynonymous SNV 0.995 3 26 hm5C_associated_SNPs_16190 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159437839-159437861
64251 chr7 135272735 135272735 1 + C T BLCA 135272723 + 135272703 135272743 41 ATCTAGGGGTGGCTCATCAGCGGCCCCCTCAACGCCAGGTG ATCTAGGGGTGGCTCATCAGCGGCCCCCTCAATGCCAGGTG < 41bp 1 0.465903990115394 1 0.468891113996506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135272723 chr7:135272735 nonsynonymous SNV 0.999 3 33 hm5C_associated_SNPs_16191 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr7:135272712-135272741
64251 chrX 69699075 69699075 1 + G A BLCA 69699058 + 69699038 69699078 41 GAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTC GAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGAGTC < 41bp 1 0.414356342725754 1 0.175692737102509 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DLG3 ENSG00000082458 CDS Human protein_coding chrX:69699058 chrX:69699075 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_16192 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:69699059-69699084
64251 chr17 42636667 42636667 1 + C G BLCA 42636652 + 42636632 42636672 41 CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTCTGGAT CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTGTGGAT < 41bp 1 0.249026110700681 1 0.0627707839012146 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636652 chr17:42636667 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_16193 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42636646-42636684
64251 chr16 30941527 30941527 1 + C T BLCA 30941537 + 30941517 30941557 41 TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCGGG TCTTCCTCCTTGGACTCAGACTCCGACTCCGACTCTTCGGG < 41bp 1 0.435596315457165 1 0.772851049900055 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941537 chr16:30941527 nonsynonymous SNV 0.997 2 11 hm5C_associated_SNPs_16194 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30941504-30941531
64251 chr7 114302141 114302141 1 + A T BLCA 114302124 + 114302104 114302144 41 CTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCTTAGCC CTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCTTTGCC < 41bp 1 0.197647455532781 1 0.19581264257431 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXP2 ENSG00000128573 CDS Human protein_coding chr7:114302124 chr7:114302141 nonsynonymous SNV 0.998 5 38 hm5C_associated_SNPs_16195 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:114302130-114302142
64251 chr10 5789627 5789627 1 + C T BLCA 5789636 + 5789616 5789656 41 TTAAAGAGACACGACCATATCAGGCTGTGACTCCATGCATT TTAAAGAGACATGACCATATCAGGCTGTGACTCCATGCATT < 41bp 1 0.529682376523415 1 0.16985622048378 experiment 0.94063524695317 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5789636 chr10:5789627 stopgain 0.008 0 12 hm5C_associated_SNPs_16196 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5789576-5789684
64251 chr16 1818252 1818252 1 + C T BLCA 1818253 + 1818233 1818273 41 CCCGTCCCGGGGGCATCATCCACGTGTATGGCGATGACAGC CCCGTCCCGGGGGCATCATTCACGTGTATGGCGATGACAGC < 41bp 1 0.597430248714459 1 0.708102107048035 experiment 0.805139502571082 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818253 chr16:1818252 synonymous SNV . 0 20 hm5C_associated_SNPs_16198 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1818228-1818255
64251 chr5 65118647 65118647 1 + G A BLCA 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGAGGATCTCTGGACGGCATGGACATGC < 41bp 1 0.382076802882915 1 0.161321133375168 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118647 synonymous SNV . 0 16 hm5C_associated_SNPs_16200 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr1 984698 984698 1 + C T BLCA 984697 + 984677 984717 41 TGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC TGGCACCGCCTGGAGCTGTCCTGGCACTGGCGCCGGGGCAC < 41bp 1 0.491297624190005 1 0.603120446205139 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984697 chr1:984698 nonsynonymous SNV 0.140 4 22 hm5C_associated_SNPs_16201 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984698 984698 1 + C T BLCA 984701 + 984681 984721 41 ACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACCCTC ACCGCCTGGAGCTGTCCTGGCACTGGCGCCGGGGCACCCTC < 41bp 1 0.342983562764325 1 0.558914303779602 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984701 chr1:984698 nonsynonymous SNV 0.140 4 18 hm5C_associated_SNPs_16202 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984698 984698 1 + C T BLCA 984709 + 984689 984729 41 GAGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGA GAGCTGTCCTGGCACTGGCGCCGGGGCACCCTCTCGGTGGA < 41bp 1 0.409825114005496 1 0.754111766815186 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984709 chr1:984698 nonsynonymous SNV 0.140 4 10 hm5C_associated_SNPs_16203 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984698 984698 1 + C T BLCA 984710 + 984690 984730 41 AGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT AGCTGTCCTGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT < 41bp 1 0.532487674919422 1 0.840839505195618 experiment 0.935024650161157 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984710 chr1:984698 nonsynonymous SNV 0.140 4 9 hm5C_associated_SNPs_16204 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr7 40102457 40102457 1 + G A BLCA 40102465 + 40102445 40102485 41 TAATTACTTTATGGTACCGTCCACCTGAACTGCTACTGGGA TAATTACTTTATAGTACCGTCCACCTGAACTGCTACTGGGA < 41bp 1 0.0315762389508573 1 0.102453708648682 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102465 chr7:40102457 stopgain 1.000 0 13 hm5C_associated_SNPs_16205 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr7:40102445-40102468
64251 chr10 43292234 43292234 1 + A G BLCA 43292225 + 43292205 43292245 41 GACGATGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC GACGATGACCTTGAGAGGAGCTCAGCGGAGGAAGGGGAAGC < 41bp 1 0.359574795477558 1 0.158228605985641 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292225 chr10:43292234 synonymous SNV . 0 30 hm5C_associated_SNPs_16206 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:43292180-43292240
64251 chr10 43292234 43292234 1 + A G BLCA 43292230 + 43292210 43292250 41 TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG TGACCTTGAGAGGAGCTCAGCGGAGGAAGGGGAAGCGGAGG < 41bp 1 0.707273193242672 1 0.861681699752808 experiment 0.585453613514656 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292230 chr10:43292234 synonymous SNV . 0 25 hm5C_associated_SNPs_16207 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:43292180-43292240
64251 chr10 43292234 43292234 1 + A G BLCA 43292254 + 43292234 43292274 41 AGAAGGGGAAGCGGAGGAAGCTGATGAAAGCAGTGAAGAAG GGAAGGGGAAGCGGAGGAAGCTGATGAAAGCAGTGAAGAAG < 41bp 1 0.642923971555479 1 0.469664126634598 experiment 0.714152056889041 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292254 chr10:43292234 synonymous SNV . 0 1 hm5C_associated_SNPs_16208 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:43292180-43292240
64251 chr6 109484117 109484117 1 + C T BLCA 109484132 + 109484112 109484152 41 CAATACGAGTTCATAATCTTCAAATGAAATTGAGAAGAGAT CAATATGAGTTCATAATCTTCAAATGAAATTGAGAAGAGAT < 41bp 1 0.255025262575134 1 0.446845591068268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57L1 ENSG00000183137 CDS Human protein_coding chr6:109484132 chr6:109484117 stopgain 0.782 0 6 hm5C_associated_SNPs_16211 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:109484103-109484125
64251 chr1 26800009 26800009 1 + G T BLCA 26800015 + 26799995 26800035 41 GATAAAGCAAAGGTGAAGGACGAAGTAAGTCATTCTCTCTT GATAAAGCAAAGGTTAAGGACGAAGTAAGTCATTCTCTCTT < 41bp 1 0.564039606370921 1 0.108158975839615 experiment 0.871920787258158 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN2 ENSG00000198830 CDS Human protein_coding chr1:26800015 chr1:26800009 synonymous SNV . 0 15 hm5C_associated_SNPs_16212 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:26799955-26800032
64251 chr2 128178930 128178930 1 + G C BLCA 128178922 + 128178902 128178942 41 GATCCGCAAACGTGCCAACTCCTTCCTGGAGGAGCTCCGTC GATCCGCAAACGTGCCAACTCCTTCCTGCAGGAGCTCCGTC < 41bp 1 0.0557992961243031 1 0.0916672646999359 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128178922 chr2:128178930 nonsynonymous SNV 0.267 5 29 hm5C_associated_SNPs_16213 0 0 3 GRWD1 POSTAR2 ENCODE chr2:128178930-128178965
64251 chr3 9976246 9976246 1 + C T BLCA 9976249 + 9976229 9976269 41 AGTCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGC AGTCTTCTCCCCCGCCTTAGCCCCATCCGTGTCATACCTGC < 41bp 1 0.613098738815081 1 0.342501819133759 experiment 0.773802522369837 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976249 chr3:9976246 stopgain 0.265 0 18 hm5C_associated_SNPs_16214 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976246 9976246 1 + C T BLCA 9976251 + 9976231 9976271 41 TCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCG TCTTCTCCCCCGCCTTAGCCCCATCCGTGTCATACCTGCCG < 41bp 1 0.0387420297598317 1 0.0398187935352325 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976251 chr3:9976246 stopgain 0.265 0 16 hm5C_associated_SNPs_16215 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976246 9976246 1 + C T BLCA 9976252 + 9976232 9976272 41 CTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCGG CTTCTCCCCCGCCTTAGCCCCATCCGTGTCATACCTGCCGG < 41bp 1 0.191493595685269 1 0.25887656211853 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976252 chr3:9976246 stopgain 0.265 0 15 hm5C_associated_SNPs_16216 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr19 50335588 50335588 1 + G C BLCA 50335577 + 50335557 50335597 41 TCCCGCAGACCACCCTGGGCCCTTTGTTCCGGAACTCAAGG TCCCGCAGACCACCCTGGGCCCTTTGTTCCGCAACTCAAGG < 41bp 1 0.0143708883080858 1 0.0347674489021301 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50335577 chr19:50335588 synonymous SNV . 0 32 hm5C_associated_SNPs_16217 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:50335582-50335620
64251 chr11 33079495 33079495 1 + A G BLCA 33079509 + 33079489 33079529 41 GGTCATACTAGACTGAGAAACCAGATAACAGAAGTCTTGGA GGTCATGCTAGACTGAGAAACCAGATAACAGAAGTCTTGGA < 41bp 1 0.54574252699879 1 0.538648128509521 experiment 0.90851494600242 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33079509 chr11:33079495 nonsynonymous SNV 0.993 1 7 hm5C_associated_SNPs_16218 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:33079479-33079502
64251 chr6 133138189 133138189 1 + G T BLCA 133138207 + 133138187 133138227 41 GTGTAGTAGTTAAGGTAAGTCACCGTTTATTCTAGGGATGA GTTTAGTAGTTAAGGTAAGTCACCGTTTATTCTAGGGATGA < 41bp 1 0.779037957325195 1 0.284072160720825 experiment 0.441924085349609 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138207 chr6:133138189 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_16219 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:133138180-133138200
64251 chr7 99627511 99627511 1 + C T BLCA 99627493 + 99627473 99627513 41 TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCC TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGCACTCC < 41bp 1 0.249700438629273 1 0.0784173905849457 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627493 chr7:99627511 nonsynonymous SNV 0.354 0 39 hm5C_associated_SNPs_16220 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr7 99627511 99627511 1 + C T BLCA 99627498 + 99627478 99627518 41 CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCAT CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACTCCCTCAT < 41bp 1 0.515057732847025 1 0.0711269676685333 experiment 0.969884534305949 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627498 chr7:99627511 nonsynonymous SNV 0.354 0 34 hm5C_associated_SNPs_16221 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr15 73007723 73007723 1 + C T BLCA 73007740 + 73007720 73007760 41 CCTCAAGCAGGTGGCCAGATCTTTGTGAGTATTGGCAACCT CCTTAAGCAGGTGGCCAGATCTTTGTGAGTATTGGCAACCT < 41bp 1 0.42114219247319 1 0.20898973941803 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BBS4 ENSG00000140463 CDS Human protein_coding chr15:73007740 chr15:73007723 synonymous SNV . 0 4 hm5C_associated_SNPs_16222 0 0 1 PRPF8 POSTAR2 ENCODE chr15:73007723-73007780
64251 chr11 47436657 47436657 1 + C G BLCA 47436655 + 47436635 47436675 41 CCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAAC CCTTCACCTCTGGCGGCTTTCTGTACATCGCCTTGGTGAAC < 41bp 1 0.777591668505099 1 0.841984391212463 experiment 0.444816662989803 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC39A13 ENSG00000165915 CDS Human protein_coding chr11:47436655 chr11:47436657 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_16223 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:47436650-47436676
64251 chr16 2011284 2011284 1 + G A BLCA 2011268 + 2011248 2011288 41 CATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG CATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAAAGGG < 41bp 1 0.591059601241769 1 0.290755212306976 experiment 0.817880797516462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011268 chr16:2011284 synonymous SNV . 0 37 hm5C_associated_SNPs_16224 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr16 2011284 2011284 1 + G A BLCA 2011269 + 2011249 2011289 41 ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAAAGGGA < 41bp 1 0.589224759587444 1 0.404100596904755 experiment 0.821550480825113 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011269 chr16:2011284 synonymous SNV . 0 36 hm5C_associated_SNPs_16225 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr16 2011284 2011284 1 + G A BLCA 2011276 + 2011256 2011296 41 GCATGTATGAAGCCGAAATGCAGTGGAAGAGGGACTAGTAC GCATGTATGAAGCCGAAATGCAGTGGAAAAGGGACTAGTAC < 41bp 1 0.716446201380669 1 0.683938920497894 experiment 0.567107597238661 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011276 chr16:2011284 synonymous SNV . 0 29 hm5C_associated_SNPs_16226 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr1 207510111 207510111 1 + C G BLCA 207510119 + 207510099 207510139 41 AACTACAGAAGTCTCACCAACTTCTCAGAAAACCACCACAA AACTACAGAAGTGTCACCAACTTCTCAGAAAACCACCACAA < 41bp 1 0.365391173452412 1 0.805492043495178 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207510119 chr1:207510111 synonymous SNV . 0 13 hm5C_associated_SNPs_16229 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:207510101-207510121
64251 chr12 14650708 14650708 1 + C G BLCA 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTGA < 41bp 1 0.687670751288639 1 0.34931293129921 experiment 0.624658497422721 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650708 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_16230 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14650699-14650719
64251 chr1 45268966 45268966 1 + C G BLCA 45268980 + 45268960 45269000 41 CCCTATCAGCAGCTGCGTGACAGTCCCAGACCTGACACCCC CCCTATGAGCAGCTGCGTGACAGTCCCAGACCTGACACCCC < 41bp 1 0.228296752181604 1 0.393904715776443 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45268980 chr1:45268966 nonsynonymous SNV 0.997 0 7 hm5C_associated_SNPs_16231 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:45268878-45268966
64251 chr1 114483780 114483780 1 + C A BLCA 114483796 + 114483776 114483816 41 CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGT CTTTAAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGT < 41bp 1 0.0309691434215604 1 0.105891048908234 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483796 chr1:114483780 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_16232 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:114483759-114483783
64251 chrX 153780345 153780345 1 + C T BLCA 153780337 + 153780317 153780357 41 GGGAAGCCAGCCATGCTGCACCTGCCTTCAGAACAGGGCGC GGGAAGCCAGCCATGCTGCACCTGCCTTTAGAACAGGGCGC < 41bp 1 0.0801899539321176 1 0.11500072479248 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IKBKG ENSG00000073009 CDS Human other chrX:153780337 chrX:153780345 nonsynonymous SNV 0.590 2 29 hm5C_associated_SNPs_16233 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:153780340-153780360
64251 chr8 87560571 87560571 1 + C G BLCA 87560561 + 87560541 87560581 41 TTCACTGGCTCCAATGGTGACCCAAGGTCTCCAGACTCCCT TTCACTGGCTCCAATGGTGACCCAAGGTCTGCAGACTCCCT < 41bp 1 0.500439411706213 1 0.0773419439792633 experiment 0.999121176587574 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87560561 chr8:87560571 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_16234 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:87560547-87560591
64251 chr4 174242741 174242741 1 + G A BLCA 174242739 + 174242719 174242759 41 TGTGTTTTCCAGAACCTGCACAGATTTACTCATATTCCTTC TGTGTTTTCCAGAACCTGCACAAATTTACTCATATTCCTTC < 41bp 1 0.197980067982331 1 0.110338270664215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174242739 chr4:174242741 nonsynonymous SNV 0.900 0 23 hm5C_associated_SNPs_16237 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:174242728-174242776
64251 chr1 171763634 171763634 1 + C G BLCA 171763629 + 171763609 171763649 41 CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTTAAAA CCCAGCATTTGTGGAGCAATCTTTTGTACAGAAGGTTAAAA < 41bp 1 0.2262897460902 1 0.133596867322922 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763629 chr1:171763634 nonsynonymous SNV 0.943 4 26 hm5C_associated_SNPs_16238 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:171763613-171763638
64251 chr12 14650678 14650678 1 + C T BLCA 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTTAGAAGCCACACTTGAAGTTAGCACGCGTTCA < 41bp 1 0.680448694664514 1 0.291010737419128 experiment 0.639102610670973 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650678 stopgain 1.000 0 10 hm5C_associated_SNPs_16241 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:14650655-14650679
64251 chr20 47895492 47895492 1 + G A BLCA 47895499 + 47895479 47895519 41 TGGTGTAAATGATGACTTCACTTTTTTCCCCATCAGATCGA TGGTGTAAATGATAACTTCACTTTTTTCCCCATCAGATCGA < 41bp 1 0.088741190941636 1 0.0862611532211304 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895499 chr20:47895492 . . 0 14 hm5C_associated_SNPs_16242 0 0 102 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47895460-47895500
64251 chr20 47895492 47895492 1 + G A BLCA 47895509 + 47895489 47895529 41 GATGACTTCACTTTTTTCCCCATCAGATCGACAATGCTGAC GATAACTTCACTTTTTTCCCCATCAGATCGACAATGCTGAC < 41bp 1 0.290187065410299 1 0.0501384437084198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895509 chr20:47895492 . . 0 4 hm5C_associated_SNPs_16243 0 0 102 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47895460-47895500
64251 chr20 49576168 49576168 1 + C A BLCA 49576184 + 49576164 49576204 41 AAATCGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG AAATAGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG < 41bp 1 0.153560397126664 1 0.168146133422852 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576184 chr20:49576168 synonymous SNV . 0 5 hm5C_associated_SNPs_16244 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:49576162-49576193
64251 chr7 100484518 100484518 1 + C A BLCA 100484519 + 100484499 100484539 41 GGGGAGCAGCGGGGGCGCTCCTCCTGAGGAGCCTCCTAAGG GGGGAGCAGCGGGGGCGCTACTCCTGAGGAGCCTCCTAAGG < 41bp 1 0.685219406390219 1 0.717107832431793 experiment 0.629561187219561 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100484519 chr7:100484518 nonsynonymous SNV 0.164 1 20 hm5C_associated_SNPs_16245 0 0 1 PPIG POSTAR2 ENCODE chr7:100484458-100484534
64251 chr22 24718351 24718351 1 + C T BLCA 24718365 + 24718345 24718385 41 TCCGCTCTCTTCTAGATGAGCATCACATTTCTTATGTCATA TCCGCTTTCTTCTAGATGAGCATCACATTTCTTATGTCATA < 41bp 1 0.090401092096531 1 0.0583515465259552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPECC1L ENSG00000100014;ENSG00000258555 CDS Human other chr22:24718365 chr22:24718351 nonsynonymous SNV 0.970 3 7 hm5C_associated_SNPs_16246 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr22:24718338-24718385
64251 chr10 1042091 1042091 1 + C A BLCA 1042089 + 1042069 1042109 41 TGATGAAGTATGGCGACTCTCTCTACCGCTGCAAACAGCTG TGATGAAGTATGGCGACTCTCTATACCGCTGCAAACAGCTG < 41bp 1 0.708324483971954 1 0.395673543214798 experiment 0.583351032056092 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1042089 chr10:1042091 synonymous SNV . 0 23 hm5C_associated_SNPs_16248 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr10:1042047-1042114
64251 chr9 91930099 91930099 1 + C T BLCA 91930100 + 91930080 91930120 41 AACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAGT AACAGGCATGTTATGTTACTCAGAGAACTTTCCAAACAAGT < 41bp 1 0.568644866828685 1 0.572099804878235 experiment 0.862710266342629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930100 chr9:91930099 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_16249 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930080-91930100
64251 chr5 154244931 154244931 1 + C G BLCA 154244920 + 154244900 154244940 41 CTTCTGGAATCAATACTTGGCAGTTCAATTTCAAATTTAAC CTTCTGGAATCAATACTTGGCAGTTCAATTTGAAATTTAAC < 41bp 1 0.0523699983612321 1 0.0983541309833527 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNOT8 ENSG00000155508 CDS Human protein_coding chr5:154244920 chr5:154244931 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_16250 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:154244922-154244946
64251 chr16 69942718 69942718 1 + C G BLCA 69942737 + 69942717 69942757 41 CCAAGACCACCACCTGGGAGCGGCCCCTTCCTCCAGGGTAG CGAAGACCACCACCTGGGAGCGGCCCCTTCCTCCAGGGTAG < 41bp 1 0.179654514833308 1 0.267308682203293 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWP2 ENSG00000198373 CDS Human protein_coding chr16:69942737 chr16:69942718 synonymous SNV . 0 2 hm5C_associated_SNPs_16254 0 0 2 PRPF8 POSTAR2 ENCODE chr16:69942718-69942793
64251 chr14 53173924 53173924 1 + G C BLCA 53173926 + 53173906 53173946 41 CCGGCATCCCCTATGAGAGACGGCTTCTCATCATGGCGGAC CCGGCATCCCCTATGAGACACGGCTTCTCATCATGGCGGAC < 41bp 1 0.589374993719932 1 0.0992071032524109 experiment 0.821250012560135 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53173926 chr14:53173924 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_16255 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:53173920-53173940
64251 chr3 17056240 17056240 1 + C A BLCA 17056251 + 17056231 17056271 41 GCCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG GCCTCTCCTATGTGGCCAATCTCATGCAGTGCATGTTGGCG < 41bp 1 0.493673523972158 1 0.0978766679763794 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056251 chr3:17056240 nonsynonymous SNV 0.984 2 10 hm5C_associated_SNPs_16256 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:17056211-17056243
64251 chr4 144390255 144390255 1 + G A BLCA 144390263 + 144390243 144390283 41 TGACCAACAGAAGACCTTGGCTCTAAAGAGTACCCGGGAAG TGACCAACAGAAAACCTTGGCTCTAAAGAGTACCCGGGAAG < 41bp 1 0.526561020507813 1 0.822988271713257 experiment 0.946877958984375 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144390263 chr4:144390255 synonymous SNV . 0 13 hm5C_associated_SNPs_16257 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:144390215-144390257
64251 chr22 42276798 42276798 1 + G A BLCA 42276812 + 42276792 42276832 41 CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG CGCCTGAACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG < 41bp 1 0.0690193782416246 1 0.0483216941356659 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276812 chr22:42276798 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_16258 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:42276795-42276820
64251 chr6 31604138 31604138 1 + C G BLCA 31604122 + 31604102 31604142 41 AGTTGCCGGCTGGAGGAGTTCTCTACCCTCCACCTTCCTTC AGTTGCCGGCTGGAGGAGTTCTCTACCCTCCACCTTGCTTC < 41bp 1 0.695585697002797 1 0.804964900016785 experiment 0.608828605994405 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604122 chr6:31604138 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_16259 0 0 21 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31604060-31604160
64251 chr4 1725548 1725548 1 + G A BLCA 1725560 + 1725540 1725580 41 CTCAGGATGACACCCTTGGACTGGAAAACTCACACCCGGTC CTCAGGATAACACCCTTGGACTGGAAAACTCACACCCGGTC < 41bp 1 0.795767941265335 1 0.46776071190834 experiment 0.40846411746933 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1725560 chr4:1725548 nonsynonymous SNV 0.002 2 9 hm5C_associated_SNPs_16260 0 0 35 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:1725520-1725556
64251 chr11 985535 985535 1 + G C BLCA 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCGAACAATGCCGTGCTCTTCGAGGCCATCAGCTTA < 41bp 1 0.0512636403406544 1 0.0475075244903564 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985535 nonsynonymous SNV 0.776 3 11 hm5C_associated_SNPs_16262 0 0 3 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr11 47600884 47600884 1 + G A BLCA 47600875 + 47600855 47600895 41 GAGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATG GAGGCGGGAGAGCGCCGGGGCCGACACGCACCGTGAGTATG < 41bp 1 0.091210508323585 1 0.0581190288066864 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600875 chr11:47600884 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_16281 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600884 47600884 1 + G A BLCA 47600876 + 47600856 47600896 41 AGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGT AGGCGGGAGAGCGCCGGGGCCGACACGCACCGTGAGTATGT < 41bp 1 0.774460355896975 1 0.181994736194611 experiment 0.451079288206049 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600876 chr11:47600884 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_16282 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600884 47600884 1 + G A BLCA 47600885 + 47600865 47600905 41 AGCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGC AGCGCCGGGGCCGACACGCACCGTGAGTATGTGCGGGCAGC < 41bp 1 0.267274586174639 1 0.0466585755348206 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600885 chr11:47600884 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_16283 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600884 47600884 1 + G A BLCA 47600886 + 47600866 47600906 41 GCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGCG GCGCCGGGGCCGACACGCACCGTGAGTATGTGCGGGCAGCG < 41bp 1 0.795846749768309 1 0.124795764684677 experiment 0.408306500463382 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600886 chr11:47600884 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_16284 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr3 128998681 128998681 1 + G C BLCA 128998697 + 128998677 128998717 41 CCCTGATAAGTACTGCCCCTCTTACAACAAGAGTCCTCAAT CCCTCATAAGTACTGCCCCTCTTACAACAAGAGTCCTCAAT < 41bp 1 0.0659877791303753 1 0.0294438898563385 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMCES ENSG00000183624 CDS Human protein_coding chr3:128998697 chr3:128998681 nonsynonymous SNV 0.074 0 5 hm5C_associated_SNPs_16285 0 0 1 GRWD1 POSTAR2 ENCODE chr3:128998645-128998777
64251 chr15 64792156 64792156 1 + G A BLCA 64792174 + 64792154 64792194 41 CAGAAAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGA CAAAAAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGA < 41bp 1 0.573486667811339 1 0.839556336402893 experiment 0.853026664377323 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64792174 chr15:64792156 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_16286 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:64792126-64792156
64251 chr2 178378611 178378611 1 + C T BLCA 178378621 + 178378601 178378641 41 GAAGGGTGTTCAGTTTGCTCCTTTTTCTACATGCAGGTAAG GAAGGGTGTTTAGTTTGCTCCTTTTTCTACATGCAGGTAAG < 41bp 1 0.0333487841563326 1 0.106463074684143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGPS ENSG00000018510 CDS Human protein_coding chr2:178378621 chr2:178378611 stopgain 0.998 1 11 hm5C_associated_SNPs_16287 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:178378607-178378802
64251 chr19 17615416 17615416 1 + C G BLCA 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCGT < 41bp 1 0.319979607878105 1 0.125579565763474 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615416 nonsynonymous SNV 0.070 4 40 hm5C_associated_SNPs_16288 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr17 4926875 4926875 1 + C T BLCA 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCCGTCAGCCCGGCCCCTCTCGCCACCACTGTCA < 41bp 1 0.0992550920281561 1 0.019385039806366 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926875 nonsynonymous SNV 0.025 0 25 hm5C_associated_SNPs_16293 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926875 4926875 1 + C T BLCA 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCCGTCAGCCCGGCCCCTCTCGCCACCACTGTCAAGC < 41bp 1 0.213226798717373 1 0.0321597754955292 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926875 nonsynonymous SNV 0.025 0 22 hm5C_associated_SNPs_16294 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926875 4926875 1 + C T BLCA 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG CGTCAGCCCGGCCCCTCTCGCCACCACTGTCAAGCTGGGAG < 41bp 1 0.104149223096037 1 0.215936064720154 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926875 nonsynonymous SNV 0.025 0 16 hm5C_associated_SNPs_16295 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926875 4926875 1 + C T BLCA 4926881 + 4926861 4926901 41 GTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGC GTCAGCCCGGCCCCTCTCGCCACCACTGTCAAGCTGGGAGC < 41bp 1 0.765649883055281 1 0.676975607872009 experiment 0.468700233889438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926881 chr17:4926875 nonsynonymous SNV 0.025 0 15 hm5C_associated_SNPs_16296 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926875 4926875 1 + C T BLCA 4926883 + 4926863 4926903 41 CAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG CAGCCCGGCCCCTCTCGCCACCACTGTCAAGCTGGGAGCGG < 41bp 1 0.151938271406202 1 0.0503702759742737 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926883 chr17:4926875 nonsynonymous SNV 0.025 0 13 hm5C_associated_SNPs_16297 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr6 26204978 26204978 1 + C T BLCA 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCATCTGGCGCCTTGCTCGTCGCGG < 41bp 1 0.79593065555163 1 0.853730916976929 experiment 0.40813868889674 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204978 nonsynonymous SNV 0.019 0 22 hm5C_associated_SNPs_16298 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr8 48874100 48874100 1 + C G BLCA 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATGTCCCTCTCAGAGACGTAGAGGCGA < 41bp 1 0.153889895080416 1 0.0718506276607513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874100 nonsynonymous SNV 0.012 1 17 hm5C_associated_SNPs_16299 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48874044-48874106
64251 chr21 45546826 45546826 1 + C T BLCA 45546824 + 45546804 45546844 41 AAACCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC AAACCTGAGATCAGGGTGACCTTACTCCGCTTCTCTCCCAC < 41bp 1 0.171478460951252 1 0.127068400382996 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45546824 chr21:45546826 nonsynonymous SNV 0.442 1 23 hm5C_associated_SNPs_16301 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45546810-45546844
64251 chr17 28750667 28750667 1 + C T BLCA 28750676 + 28750656 28750696 41 ACACTAGAATTCACCTTATGCCATCCATGAATCCTGATGGG ACACTAGAATTTACCTTATGCCATCCATGAATCCTGATGGG < 41bp 1 0.0344255433704737 1 0.031213104724884 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28750676 chr17:28750667 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_16302 0 0 3 NOL12 POSTAR2 ENCODE chr17:28750606-28750686
64251 chr21 45546836 45546836 1 + C T BLCA 45546824 + 45546804 45546844 41 AAACCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC AAACCTGAGATCAGGGTGACCTCACTCCGCTTTTCTCCCAC < 41bp 1 0.408840818754499 1 0.189801752567291 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45546824 chr21:45546836 synonymous SNV . 0 33 hm5C_associated_SNPs_16303 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45546810-45546844
64251 chr15 40269014 40269014 1 + G A BLCA 40269028 + 40269008 40269048 41 GAGGACGAGCACGGTGGCGTCTTCTCCCAGTCCTTCCTGTA GAGGACAAGCACGGTGGCGTCTTCTCCCAGTCCTTCCTGTA < 41bp 1 0.26753158049167 1 0.0573285520076752 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40269028 chr15:40269014 nonsynonymous SNV 0.666 0 7 hm5C_associated_SNPs_16304 0 0 4 FMR1 POSTAR2 ENCODE chr15:40268982-40269045
64251 chr9 100773666 100773666 1 + G A BLCA 100773650 + 100773630 100773670 41 GATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGA GATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTAAGGA < 41bp 1 0.681979355526281 1 0.525973737239838 experiment 0.636041288947438 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773650 chr9:100773666 nonsynonymous SNV 0.969 1 37 hm5C_associated_SNPs_16305 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773666 100773666 1 + G A BLCA 100773653 + 100773633 100773673 41 GTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT GTAGAAGGGGATGAGGACGACGATGAAGTCAGTAAGGAGGT < 41bp 1 0.416325363924969 1 0.36298331618309 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773653 chr9:100773666 nonsynonymous SNV 0.969 1 34 hm5C_associated_SNPs_16306 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773666 100773666 1 + G A BLCA 100773662 + 100773642 100773682 41 GATGAGGACGACGATGAAGTCAGTGAGGAGGTCAGTGCAGC GATGAGGACGACGATGAAGTCAGTAAGGAGGTCAGTGCAGC < 41bp 1 0.788269596493791 1 0.264003843069077 experiment 0.423460807012418 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773662 chr9:100773666 nonsynonymous SNV 0.969 1 25 hm5C_associated_SNPs_16307 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr12 124102401 124102401 1 + C A BLCA 124102395 + 124102375 124102415 41 CCCATGGAAGAGTCATACATCAATTTCCTTGCAATTAACCA CCCATGGAAGAGTCATACATCAATTTACTTGCAATTAACCA < 41bp 1 0.172905271574247 1 0.175170451402664 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX55 ENSG00000111364 CDS Human protein_coding chr12:124102395 chr12:124102401 nonsynonymous SNV 0.971 1 27 hm5C_associated_SNPs_16308 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:124102388-124102426
64251 chr10 73122286 73122286 1 + G C BLCA 73122270 + 73122250 73122290 41 CTAAGATTGTGCCCAGGGAGCTGGCTGAGGCCACGGGAGTG CTAAGATTGTGCCCAGGGAGCTGGCTGAGGCCACGGCAGTG < 41bp 1 0.679782911059221 1 0.493979007005692 experiment 0.640434177881558 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73122270 chr10:73122286 nonsynonymous SNV 0.189 2 37 hm5C_associated_SNPs_16309 0 0 4 TIA1 POSTAR2 ENCODE chr10:73122259-73122304
64251 chr11 61106814 61106814 1 + G A BLCA 61106796 + 61106776 61106816 41 GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCAGT < 41bp 1 0.631320990224128 1 0.468068242073059 experiment 0.737358019551743 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106796 chr11:61106814 synonymous SNV . 0 39 hm5C_associated_SNPs_16313 0 0 5 DDX24 POSTAR2 ENCODE chr11:61106805-61106873
64251 chr11 61106814 61106814 1 + G A BLCA 61106797 + 61106777 61106817 41 GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGTG GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCAGTG < 41bp 1 0.788620331150074 1 0.667881786823273 experiment 0.422759337699851 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106797 chr11:61106814 synonymous SNV . 0 38 hm5C_associated_SNPs_16314 0 0 5 DDX24 POSTAR2 ENCODE chr11:61106805-61106873
64251 chr8 33356007 33356007 1 + G A BLCA 33355999 + 33355979 33356019 41 TGAAGATCAGGATGGTAAATCCTCCAGTGAGGAGGAGGAAG TGAAGATCAGGATGGTAAATCCTCCAGTAAGGAGGAGGAAG < 41bp 1 0.130746067381847 1 0.118553042411804 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAK16 ENSG00000198042 CDS Human protein_coding chr8:33355999 chr8:33356007 nonsynonymous SNV 0.994 0 29 hm5C_associated_SNPs_16315 0 0 3 UCHL5 POSTAR2 ENCODE chr8:33355949-33356020
64251 chr1 228479691 228479691 1 + C G BLCA 228479689 + 228479669 228479709 41 GTGTGAACTGAGCAAGGTGGCCCCTGTGGAGTGGAGGAAGG GTGTGAACTGAGCAAGGTGGCCGCTGTGGAGTGGAGGAAGG < 41bp 1 0.0530301873899263 1 0.386653870344162 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228479689 chr1:228479691 nonsynonymous SNV 0.017 3 23 hm5C_associated_SNPs_16316 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228479663-228479701
64251 chr19 4475339 4475339 1 + C T BLCA 4475343 + 4475323 4475363 41 ATCTTTTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTC ATCTTTTTCTTTGGCATACACGAAACGTAAGTGTCCCCTTC < 41bp 1 0.595878384780628 1 0.277012974023819 experiment 0.808243230438745 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475343 chr19:4475339 nonsynonymous SNV 0.849 3 17 hm5C_associated_SNPs_16319 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:4475309-4475342
64251 chr19 4475339 4475339 1 + C T BLCA 4475348 + 4475328 4475368 41 TTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTCTGGGG TTTCTTTGGCATACACGAAACGTAAGTGTCCCCTTCTGGGG < 41bp 1 0.400579411037548 1 0.100457578897476 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475348 chr19:4475339 nonsynonymous SNV 0.849 3 12 hm5C_associated_SNPs_16320 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:4475309-4475342
64251 chr19 57795979 57795979 1 + G A BLCA 57795986 + 57795966 57796006 41 GTGGGGGCAGTTGGACGTGACCCAGAGGGCCTTGTACGTGG GTGGGGGCAGTTGAACGTGACCCAGAGGGCCTTGTACGTGG < 41bp 1 0.628821021019773 1 0.0922248065471649 experiment 0.742357957960454 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57795986 chr19:57795979 nonsynonymous SNV 0.957 1 14 hm5C_associated_SNPs_16321 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:57795916-57795988
64251 chr11 66050541 66050541 1 + C G BLCA 66050523 + 66050503 66050543 41 CAGCTGGTGGTCCCAGAATACTCCATCCACGGCCTCTTCTG CAGCTGGTGGTCCCAGAATACTCCATCCACGGCCTCTTGTG < 41bp 1 0.736757933906634 1 0.915665864944458 experiment 0.526484132186732 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CNIH2 ENSG00000174871 CDS Human protein_coding chr11:66050523 chr11:66050541 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_16322 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:66050519-66050556
64251 chr12 105519872 105519872 1 + C T BLCA 105519876 + 105519856 105519896 41 ATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG ATTTGCACATAGTATTTGGTCAATTTTTGCAAATGTAGAAG < 41bp 1 0.197733010377739 1 0.0829561948776245 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519876 chr12:105519872 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_16323 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519872 105519872 1 + C T BLCA 105519885 + 105519865 105519905 41 TAGTATTCGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG TAGTATTTGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG < 41bp 1 0.368419035651079 1 0.263281285762787 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519885 chr12:105519872 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_16324 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr3 184039813 184039813 1 + G C BLCA 184039793 + 184039773 184039813 41 AGCAGGAGAAGCAGGAGAAGCTGAGAGTGAGAAAGGAGGAG AGCAGGAGAAGCAGGAGAAGCTGAGAGTGAGAAAGGAGGAC < 41bp 1 0.556079292545875 1 0.39464282989502 experiment 0.887841414908251 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039793 chr3:184039813 nonsynonymous SNV 0.993 2 41 hm5C_associated_SNPs_16327 0 0 29 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184039718-184039833
64251 chr17 62223730 62223730 1 + C T BLCA 62223713 + 62223693 62223733 41 GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTTGTG < 41bp 1 0.129127554059415 1 0.0886106491088867 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223713 chr17:62223730 . . 0 38 hm5C_associated_SNPs_16328 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223714 + 62223694 62223734 41 GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTTGTGG < 41bp 1 0.287101315530886 1 0.184623152017593 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223714 chr17:62223730 . . 0 37 hm5C_associated_SNPs_16329 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223715 + 62223695 62223735 41 CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTTGTGGC < 41bp 1 0.181333932351105 1 0.115907311439514 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223715 chr17:62223730 . . 0 36 hm5C_associated_SNPs_16330 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223716 + 62223696 62223736 41 GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTTGTGGCG < 41bp 1 0.117930772674045 1 0.112449467182159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223716 chr17:62223730 . . 0 35 hm5C_associated_SNPs_16331 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTTGTGGCGCCGG < 41bp 1 0.524295913567613 1 0.660691440105438 experiment 0.951408172864774 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223730 . . 0 31 hm5C_associated_SNPs_16332 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223727 + 62223707 62223747 41 TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA TTTGAGCCCCCGCCGAGCTTCCTTGTGGCGCCGGGGGTCAA < 41bp 1 0.137185768665015 1 0.0837636590003967 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223727 chr17:62223730 . . 0 24 hm5C_associated_SNPs_16333 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223728 + 62223708 62223748 41 TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT TTGAGCCCCCGCCGAGCTTCCTTGTGGCGCCGGGGGTCAAT < 41bp 1 0.395471416321535 1 0.0467757880687714 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223728 chr17:62223730 . . 0 23 hm5C_associated_SNPs_16334 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223735 + 62223715 62223755 41 CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC CCCGCCGAGCTTCCTTGTGGCGCCGGGGGTCAATCTGCAGC < 41bp 1 0.669829401344482 1 0.120219767093658 experiment 0.660341197311037 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223735 chr17:62223730 . . 0 16 hm5C_associated_SNPs_16335 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223730 62223730 1 + C T BLCA 62223745 + 62223725 62223765 41 TTCCTCGTGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT TTCCTTGTGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT < 41bp 1 0.231129223675796 1 0.141764372587204 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223745 chr17:62223730 . . 0 6 hm5C_associated_SNPs_16336 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr20 37150306 37150306 1 + G C BLCA 37150300 + 37150280 37150320 41 CTGTGTAGGATTTTTTGTAGCAAGAAGACTGGAGAAGAGAT CTGTGTAGGATTTTTTGTAGCAAGAACACTGGAGAAGAGAT < 41bp 1 0.529492931654174 1 0.581181883811951 experiment 0.941014136691652 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37150300 chr20:37150306 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_16337 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:37150262-37150326
64251 chr3 148714612 148714612 1 + C A BLCA 148714596 + 148714576 148714616 41 AGCACCAGACCCAGGGTGGCCTGACTGCTTCAATTCCGGAG AGCACCAGACCCAGGGTGGCCTGACTGCTTCAATTCAGGAG < 41bp 1 0.404711666856771 1 0.383253812789917 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714596 chr3:148714612 synonymous SNV . 0 37 hm5C_associated_SNPs_16339 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:148714590-148714616
64251 chr2 101622832 101622832 1 + G A BLCA 101622840 + 101622820 101622860 41 ACAGTCAATGTGGATGAGAACTAATCGCTGATCGTCAGATC ACAGTCAATGTGAATGAGAACTAATCGCTGATCGTCAGATC < 41bp 1 0.230150784588812 1 0.0894710421562195 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622840 chr2:101622832 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_16344 0 0 60 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101622644-101622868
64251 chr3 184045027 184045027 1 + G A BLCA 184045016 + 184044996 184045036 41 TCTTCCAGGAGTAGCTTGAGCCGAGAACGAGGCGAGAAAGC TCTTCCAGGAGTAGCTTGAGCCGAGAACGAGACGAGAAAGC < 41bp 1 0.316368330678877 1 0.499772608280182 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184045016 chr3:184045027 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_16345 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr3:184045001-184045041
64251 chr3 183854514 183854514 1 + G T BLCA 183854500 + 183854480 183854520 41 TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATT TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAATAACATT < 41bp 1 0.372673129440904 1 0.399251401424408 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183854500 chr3:183854514 stopgain 1.000 1 35 hm5C_associated_SNPs_16347 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:183854482-183854517
64251 chr7 151805363 151805363 1 + C A BLCA 151805360 + 151805340 151805380 41 AGGACGAGCGGAGGGAGCCACTGCACCAATAAAGTAAGATC AGGACGAGCGGAGGGAGCCACTGAACCAATAAAGTAAGATC < 41bp 1 0.626942588179144 1 0.744495451450348 experiment 0.746114823641712 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805360 chr7:151805363 nonsynonymous SNV 0.598 2 24 hm5C_associated_SNPs_16350 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:151805331-151805366
64251 chr20 44526704 44526704 1 + G A BLCA 44526703 + 44526683 44526723 41 GACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTC GACAGCGGGGAGCAGATTGCCAGCTTCGTGAAGGAGTTCTC < 41bp 1 0.65196425486132 1 0.739144325256348 experiment 0.696071490277359 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44526703 chr20:44526704 nonsynonymous SNV 0.366 5 22 hm5C_associated_SNPs_16351 1 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:44526677-44526707
64251 chr5 43650630 43650630 1 + C A BLCA 43650617 + 43650597 43650637 41 GGTTGGCACTGATGGGAGGACATTTGTATCCTTCCACAACT GGTTGGCACTGATGGGAGGACATTTGTATCCTTACACAACT < 41bp 1 0.144890663156397 1 0.0307874977588654 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43650617 chr5:43650630 nonsynonymous SNV 0.997 1 34 hm5C_associated_SNPs_16352 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr5:43650622-43650643
64251 chr9 137593102 137593102 1 + C T BLCA 137593086 + 137593066 137593106 41 CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACTGCAG < 41bp 1 0.296268796488844 1 0.136741876602173 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137593086 chr9:137593102 nonsynonymous SNV 0.434 3 37 hm5C_associated_SNPs_16353 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:137593073-137593102
64251 chr2 55461976 55461976 1 + C G BLCA 55461971 + 55461951 55461991 41 ATTCTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGA ATTCTTCCATTAACAGGAGTCTACTGTTCATCTTGTGTTGA < 41bp 1 0.249156886017491 1 0.108326494693756 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461971 chr2:55461976 nonsynonymous SNV 0.997 2 26 hm5C_associated_SNPs_16354 0 0 9 IGF2BP1 POSTAR2 ENCODE chr2:55461966-55461998
64251 chr2 55461976 55461976 1 + C G BLCA 55461974 + 55461954 55461994 41 CTTCCATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGAC CTTCCATTAACAGGAGTCTACTGTTCATCTTGTGTTGAGAC < 41bp 1 0.152484952873635 1 0.174960434436798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461974 chr2:55461976 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_16355 0 0 9 IGF2BP1 POSTAR2 ENCODE chr2:55461966-55461998
64251 chr2 55461976 55461976 1 + C G BLCA 55461979 + 55461959 55461999 41 ATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGT ATTAACAGGAGTCTACTGTTCATCTTGTGTTGAGACTTCGT < 41bp 1 0.169259191766767 1 0.0319207012653351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461979 chr2:55461976 nonsynonymous SNV 0.997 2 18 hm5C_associated_SNPs_16356 0 0 9 IGF2BP1 POSTAR2 ENCODE chr2:55461966-55461998
64251 chr19 10394842 10394842 1 + G C BLCA 10394840 + 10394820 10394860 41 TCCACCTGGCACTGGGGGACCAGAGGTTGAACCCCACAGTC TCCACCTGGCACTGGGGGACCACAGGTTGAACCCCACAGTC < 41bp 1 0.75864475505737 1 0.583903431892395 experiment 0.48271048988526 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394840 chr19:10394842 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_16357 0 0 4 DHX30 POSTAR2 ENCODE chr19:10394840-10394898
64251 chr17 25937178 25937178 1 + G A BLCA 25937195 + 25937175 25937215 41 GACGAGGATCAGCTGCCATTCTCCAAAGCTGCTGATGTCTA GACAAGGATCAGCTGCCATTCTCCAAAGCTGCTGATGTCTA < 41bp 1 0.772854267296846 1 0.971749424934387 experiment 0.454291465406308 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control KSR1 ENSG00000141068 CDS Human protein_coding chr17:25937195 chr17:25937178 nonsynonymous SNV 0.993 3 4 hm5C_associated_SNPs_16360 0 0 3 BUD13 POSTAR2 ENCODE chr17:25937167-25937254
64251 chr22 44332964 44332964 1 + C T BLCA 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC TATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.634664422634449 1 0.096609503030777 experiment 0.730671154731102 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332964 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_16361 0 0 6 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr10 17277194 17277194 1 + T C BLCA 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGCGA < 41bp 1 0.149272617948908 1 0.116398513317108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277194 synonymous SNV . 0 39 hm5C_associated_SNPs_16362 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277194 17277194 1 + T C BLCA 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCCCTGGAACGCCAGATGCGCGAAATGGAAGA < 41bp 1 0.470472325807158 1 0.604159235954285 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277194 synonymous SNV . 0 30 hm5C_associated_SNPs_16363 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr3 191074896 191074896 1 + C T BLCA 191074906 + 191074886 191074926 41 ATTTTGCTGTCCTGGAGGACCACACCCTGGCTCACAGCCTG ATTTTGCTGTTCTGGAGGACCACACCCTGGCTCACAGCCTG < 41bp 1 0.454568717191343 1 0.329359233379364 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191074906 chr3:191074896 synonymous SNV . 0 11 hm5C_associated_SNPs_16364 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:191074889-191074914
64251 chr12 104327817 104327817 1 + C T BLCA 104327808 + 104327788 104327828 41 AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATC AGAGAAGAGTTGGTTAAAAACCTTGGTACTATAGCCAAATC < 41bp 1 0.21753976377117 1 0.100308388471603 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327808 chr12:104327817 synonymous SNV . 0 30 hm5C_associated_SNPs_16365 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:104327731-104327851
64251 chr11 108206598 108206598 1 + T A BLCA 108206601 + 108206581 108206621 41 GACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT GACCTGAGACAAGATGCAGTCATGCAACAGGTCTTCCAGAT < 41bp 1 0.18674842000639 1 0.236451596021652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108206601 chr11:108206598 synonymous SNV . 0 18 hm5C_associated_SNPs_16366 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:108206594-108206605
64251 chr20 49196247 49196247 1 + G A BLCA 49196243 + 49196223 49196263 41 CTTGCTGCTCTTTCAAGGATCAGTGGAAGGAGCTTTCCCAC CTTGCTGCTCTTTCAAGGATCAGTAGAAGGAGCTTTCCCAC < 41bp 1 0.710324910839269 1 0.658502340316772 experiment 0.579350178321461 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49196243 chr20:49196247 stopgain 0.999 1 25 hm5C_associated_SNPs_16369 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:49196240-49196264
64251 chr12 56495511 56495511 1 + C G BLCA 56495521 + 56495501 56495541 41 CTCAGTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA CTCAGTGCCTGTCTGGGCAGCACACAGAGTTGCCCACTCCA < 41bp 1 0.171006698376174 1 0.0848954916000366 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495521 chr12:56495511 nonsynonymous SNV 0.992 2 11 hm5C_associated_SNPs_16370 0 0 2 PTBP1 POSTAR2 ENCODE chr12:56495475-56495511
64251 chr6 7566637 7566637 1 + G C BLCA 7566648 + 7566628 7566668 41 GAAGTTAAAGAAAAAGAGCTCAATAAGCTGAAACAAGAAAG GAAGTTAAACAAAAAGAGCTCAATAAGCTGAAACAAGAAAG < 41bp 1 0.143717568459191 1 0.174824416637421 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7566648 chr6:7566637 nonsynonymous SNV 1.000 5 10 hm5C_associated_SNPs_16371 1 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7566616-7566697
64251 chr1 144598726 144598726 1 + A C BLCA 144598720 + 144598700 144598740 41 GATGTAGAAACTTCCCCATTCGGTGCACCAAGAGCAACCTC GATGTAGAAACTTCCCCATTCGGTGCCCCAAGAGCAACCTC < 41bp 1 0.259777367004075 1 0.697445392608643 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBPF8 ENSG00000225241 ncRNA_exonic Human other chr1:144598720 chr1:144598726 . . 0 27 hm5C_associated_SNPs_16372 0 0 1 PPIG POSTAR2 ENCODE chr1:144598716-144598775
64251 chr10 104129685 104129685 1 + C T BLCA 104129695 + 104129675 104129715 41 GTCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCA GTCTAGTGTTTGGGGCCCATCCACTGAAAACCAAGAGGCCA < 41bp 1 0.216277241381266 1 0.450533211231232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129695 chr10:104129685 nonsynonymous SNV 0.996 4 11 hm5C_associated_SNPs_16376 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr10 104129685 104129685 1 + C T BLCA 104129696 + 104129676 104129716 41 TCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCAA TCTAGTGTTTGGGGCCCATCCACTGAAAACCAAGAGGCCAA < 41bp 1 0.543029489357408 1 0.684975326061249 experiment 0.913941021285184 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129696 chr10:104129685 nonsynonymous SNV 0.996 4 10 hm5C_associated_SNPs_16377 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr6 7572193 7572193 1 + G C BLCA 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAACATT < 41bp 1 0.202795976394274 1 0.0783620178699493 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572193 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_16380 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7572164-7572198
64251 chr11 9463660 9463660 1 + G T BLCA 9463671 + 9463651 9463691 41 TGGTATCAGGCACTGACTCACGGTCTTAATGAAGAACAAAG TGGTATCAGTCACTGACTCACGGTCTTAATGAAGAACAAAG < 41bp 1 0.198003026680993 1 0.172078311443329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9463671 chr11:9463660 nonsynonymous SNV 0.996 1 10 hm5C_associated_SNPs_16381 0 0 35 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:9463620-9463660
64251 chr17 66251937 66251937 1 + C T BLCA 66251944 + 66251924 66251964 41 GGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCT GGAAGAAGCTGACTGGCGCCCTCTAAACCTTTGCCCTATCT < 41bp 1 0.670751530485016 1 0.727237224578857 experiment 0.658496939029968 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66251944 chr17:66251937 nonsynonymous SNV 0.998 4 14 hm5C_associated_SNPs_16382 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:66251911-66251955
64251 chr4 3319328 3319328 1 + T G BLCA 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGGCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA < 41bp 1 0.0878901008195971 1 0.156270980834961 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319328 nonsynonymous SNV 0.059 1 3 hm5C_associated_SNPs_16383 0 0 3 BUD13 POSTAR2 ENCODE chr4:3319285-3319338
64251 chr1 45243706 45243706 1 + G T BLCA 45243698 + 45243678 45243718 41 GAGGAAGAAGAGATTTTAAACAAAAAACGATCTAAAAAAAT GAGGAAGAAGAGATTTTAAACAAAAAACTATCTAAAAAAAT < 41bp 1 0.421011583985309 1 0.486075788736343 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243698 chr1:45243706 nonsynonymous SNV 0.999 1 29 hm5C_associated_SNPs_16384 0 0 14 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:45243698-45243719
64251 chr1 45243706 45243706 1 + G T BLCA 45243709 + 45243689 45243729 41 GATTTTAAACAAAAAACGATCTAAAAAAATTCAGAAGAAAT GATTTTAAACAAAAAACTATCTAAAAAAATTCAGAAGAAAT < 41bp 1 0.402833340074542 1 0.272360861301422 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243709 chr1:45243706 nonsynonymous SNV 0.999 1 18 hm5C_associated_SNPs_16385 0 0 14 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:45243698-45243719
64251 chr2 30756161 30756161 1 + C G BLCA 30756147 + 30756127 30756167 41 TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTGAAAGGT < 41bp 1 0.679973561492581 1 0.715710520744324 experiment 0.640052877014837 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30756147 chr2:30756161 synonymous SNV . 0 35 hm5C_associated_SNPs_16386 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:30756139-30756168
64251 chr19 18543829 18543829 1 + C T BLCA 18543840 + 18543820 18543860 41 GAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG GAACCCCATTGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG < 41bp 1 0.157117218735885 1 0.408476740121841 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543840 chr19:18543829 synonymous SNV . 0 10 hm5C_associated_SNPs_16387 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 18543829 18543829 1 + C T BLCA 18543841 + 18543821 18543861 41 AACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG AACCCCATTGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG < 41bp 1 0.688306306760948 1 0.545497298240662 experiment 0.623387386478105 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543841 chr19:18543829 synonymous SNV . 0 9 hm5C_associated_SNPs_16388 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr12 56495505 56495505 1 + G T BLCA 56495521 + 56495501 56495541 41 CTCAGTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA CTCATTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA < 41bp 1 0.131170880460414 1 0.0881633758544922 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495521 chr12:56495505 nonsynonymous SNV 0.998 4 5 hm5C_associated_SNPs_16389 0 0 2 PTBP1 POSTAR2 ENCODE chr12:56495475-56495511
64251 chr11 85977176 85977176 1 + C T BLCA 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTTTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA < 41bp 1 0.159370842293377 1 0.111149370670319 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977176 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_16390 0 0 1 ZNF622 POSTAR2 ENCODE chr11:85977124-85977205
64251 chr1 39824525 39824525 1 + G C BLCA 39824528 + 39824508 39824548 41 ACCCTGGAGTTCTCCAGGAGCAGCTTGCAACAACAAAGGTA ACCCTGGAGTTCTCCAGCAGCAGCTTGCAACAACAAAGGTA < 41bp 1 0.158554404500056 1 0.304398864507675 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39824528 chr1:39824525 nonsynonymous SNV 0.559 0 18 hm5C_associated_SNPs_16392 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39824511-39824540
64251 chr12 65563434 65563434 1 + C G BLCA 65563448 + 65563428 65563468 41 TTCTCTCAGCTCCGCCGTTACGGCCTGTCTCCCGGACCAGT TTCTCTGAGCTCCGCCGTTACGGCCTGTCTCCCGGACCAGT < 41bp 1 0.539509640704958 1 0.239217609167099 experiment 0.920980718590085 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65563448 chr12:65563434 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_16393 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:65563416-65563467
64251 chr4 123814162 123814162 1 - C T BLCA 123814174 - 123814154 123814194 41 AGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACA AGTGGATGGATCTCAATGACCTGGCGAAGACTAAAAATACA < 41bp 1 0.645116661200773 1 0.46162223815918 experiment 0.709766677598455 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814174 chr4:123814162 nonsynonymous SNV 0.021 0 33 hm5C_associated_SNPs_16394 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:123814156-123814184
64251 chr1 227171804 227171804 1 + G A BLCA 227171811 + 227171791 227171831 41 CCAGGGACCTGCTGAAGGGCCACCCCTTCTTCTATGTGCCT CCAGGGACCTGCTAAAGGGCCACCCCTTCTTCTATGTGCCT < 41bp 1 0.155121043738025 1 0.0899141430854797 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171811 chr1:227171804 synonymous SNV . 0 14 hm5C_associated_SNPs_16395 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:227171804-227171834
64251 chr1 33237295 33237295 1 + C T BLCA 33237305 + 33237285 33237325 41 TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC TCCTCCAGCTTCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC < 41bp 1 0.356546918690992 1 0.336850345134735 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237305 chr1:33237295 nonsynonymous SNV 0.006 0 11 hm5C_associated_SNPs_16397 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:33237295-33237296
64251 chr11 120317138 120317138 1 + G A BLCA 120317136 + 120317116 120317156 41 GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCCACT GAGAAGACCTGAGCTCATTCCTAAGGATCTGCATCGCCACT < 41bp 1 0.26774311976998 1 0.418781518936157 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120317136 chr11:120317138 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_16398 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:120317116-120317155
64251 chr5 132203221 132203221 1 + G A BLCA 132203205 + 132203185 132203225 41 GTAGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTT GTAGTGTTTTATCTTATCTACACATGGGGGACTGAAAAGTT < 41bp 1 0.281333168783773 1 0.138280987739563 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203205 chr5:132203221 nonsynonymous SNV 0.616 1 37 hm5C_associated_SNPs_16401 0 0 54 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203221 132203221 1 + G A BLCA 132203207 + 132203187 132203227 41 AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTCG AGTGTTTTATCTTATCTACACATGGGGGACTGAAAAGTTCG < 41bp 1 0.435932394679226 1 0.242934256792068 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203207 chr5:132203221 nonsynonymous SNV 0.616 1 35 hm5C_associated_SNPs_16402 0 0 54 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203221 132203221 1 + G A BLCA 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTGAAAAGTTCGAGAGATCCA < 41bp 1 0.554581724275983 1 0.302040338516235 experiment 0.890836551448034 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203221 nonsynonymous SNV 0.616 1 26 hm5C_associated_SNPs_16403 0 0 54 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr11 67075660 67075660 1 + G A BLCA 67075677 + 67075657 67075697 41 CTGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGA CTGAAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGA < 41bp 1 0.173316523704554 1 0.0954318046569824 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075677 chr11:67075660 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_16404 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67075651-67075708
64251 chr6 36569567 36569567 1 + C T BLCA 36569553 + 36569533 36569573 41 AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGGT AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTTGTAGGT < 41bp 1 0.0240904745715205 1 0.0315025150775909 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36569553 chr6:36569567 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_16405 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36569539-36569575
64251 chr19 49377554 49377554 1 + A C BLCA 49377573 + 49377553 49377593 41 GATGAGGAAGAAGATGAGGACAGTGACTCTGGATCAGATGA GCTGAGGAAGAAGATGAGGACAGTGACTCTGGATCAGATGA < 41bp 1 0.361332849699886 1 0.153983026742935 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377573 chr19:49377554 nonsynonymous SNV 0.965 1 2 hm5C_associated_SNPs_16406 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr2 219525710 219525710 1 + G A BLCA 219525721 + 219525701 219525741 41 CCCTTTCAAGATGCCACTTTCAGACTTTATTCTGGCTCTGA CCCTTTCAAAATGCCACTTTCAGACTTTATTCTGGCTCTGA < 41bp 1 0.379146018969179 1 0.16739359498024 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCS1L ENSG00000074582 UTR5 Human protein_coding chr2:219525721 chr2:219525710 . . 0 10 hm5C_associated_SNPs_16407 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:219525678-219525743
64251 chr5 132427046 132427046 1 + C T BLCA 132427041 + 132427021 132427061 41 AAATGAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG AAATGAGGAGCCAATGGAAACAGATTAGAATGCAAAGGAGG < 41bp 1 0.384663839298913 1 0.501973807811737 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427041 chr5:132427046 stopgain 0.999 1 26 hm5C_associated_SNPs_16408 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427046 132427046 1 + C T BLCA 132427053 + 132427033 132427073 41 AATGGAAACAGATCAGAATGCAAAGGAGGAAGAGGTAATCT AATGGAAACAGATTAGAATGCAAAGGAGGAAGAGGTAATCT < 41bp 1 0.540598250132298 1 0.332778781652451 experiment 0.918803499735404 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427053 chr5:132427046 stopgain 0.999 1 14 hm5C_associated_SNPs_16409 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr20 60879624 60879624 1 + C T BLCA 60879621 + 60879601 60879641 41 GCAGGGTCCAAGCGGCTTTTCTTCTGGATGCAGGTATGGGG GCAGGGTCCAAGCGGCTTTTCTTTTGGATGCAGGTATGGGG < 41bp 1 0.100450879233043 1 0.121293812990189 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60879621 chr20:60879624 synonymous SNV . 0 24 hm5C_associated_SNPs_16416 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:60879606-60879630
64251 chr1 25889141 25889141 1 + G A BLCA 25889142 + 25889122 25889162 41 TTCCTGTTTTCAGGCACAGGCTGTTACCCTCACCGTAGCCC TTCCTGTTTTCAGGCACAGACTGTTACCCTCACCGTAGCCC < 41bp 1 0.1637955371958 1 0.0711866617202759 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LDLRAP1 ENSG00000157978 CDS Human protein_coding chr1:25889142 chr1:25889141 nonsynonymous SNV 0.922 1 20 hm5C_associated_SNPs_16417 0 0 1 SF3A3 POSTAR2 ENCODE chr1:25889091-25889151
64251 chr2 32773024 32773024 1 + G A BLCA 32773028 + 32773008 32773048 41 CTTCTGGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGG CTTCTGGGTGGGATGTAGAACAAGCCTTAACTAAGCAAAGG < 41bp 1 0.180993993980462 1 0.471253275871277 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773028 chr2:32773024 synonymous SNV . 0 17 hm5C_associated_SNPs_16418 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:32773005-32773028
64251 chr2 32773024 32773024 1 + G A BLCA 32773033 + 32773013 32773053 41 GGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGGCTGGA GGGTGGGATGTAGAACAAGCCTTAACTAAGCAAAGGCTGGA < 41bp 1 0.173915092308789 1 0.0848912298679352 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773033 chr2:32773024 synonymous SNV . 0 12 hm5C_associated_SNPs_16419 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:32773005-32773028
64251 chr2 32773024 32773024 1 + G A BLCA 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TAGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT < 41bp 1 0.163023061129631 1 0.639290690422058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773024 synonymous SNV . 0 2 hm5C_associated_SNPs_16420 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:32773005-32773028
64251 chr22 42271620 42271620 1 + G A BLCA 42271638 + 42271618 42271658 41 CAGAATGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCAGG CAAAATGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCAGG < 41bp 1 0.0338788154838602 1 0.045524001121521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42271638 chr22:42271620 synonymous SNV . 0 3 hm5C_associated_SNPs_16421 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:42271602-42271624
64251 chr19 48833652 48833652 1 + C T BLCA 48833670 + 48833650 48833690 41 TTCGCCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAG TTTGCCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAG < 41bp 1 0.373439534675535 1 0.0389647483825684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833670 chr19:48833652 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_16422 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:48833640-48833660
64251 chr17 43220896 43220896 1 + C A BLCA 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTAGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.416707390391612 1 0.807047367095947 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220896 stopgain 0.978 0 5 hm5C_associated_SNPs_16423 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr14 97342439 97342439 1 + G A BLCA 97342429 + 97342409 97342449 41 GAAGATACGGAATGGTCAAACACACAGACAGAGGAGGCCAT GAAGATACGGAATGGTCAAACACACAGACAAAGGAGGCCAT < 41bp 1 0.538306261397428 1 0.404437154531479 experiment 0.923387477205144 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VRK1 ENSG00000100749 CDS Human protein_coding chr14:97342429 chr14:97342439 nonsynonymous SNV 0.445 0 31 hm5C_associated_SNPs_16424 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:97342372-97342455
64251 chr22 30038263 30038263 1 + G T BLCA 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCTTCCAG < 41bp 1 0.650008692571167 1 0.492617517709732 experiment 0.699982614857666 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038263 nonsynonymous SNV 0.806 4 36 hm5C_associated_SNPs_16425 0 0 3 GRWD1 POSTAR2 ENCODE chr22:30038232-30038275
64251 chr17 18220896 18220896 1 + C T BLCA 18220876 + 18220856 18220896 41 TGCTGTATTGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCC TGCTGTATTGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCT < 41bp 1 0.289707767631854 1 0.748043417930603 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18220876 chr17:18220896 nonsynonymous SNV 0.000 0 41 hm5C_associated_SNPs_16426 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18220862-18220902
64251 chr4 169630220 169630220 1 + G A BLCA 169630201 + 169630181 169630221 41 GAGATTTGCACCCTAGTTATCGCTGAGACTTTCCCTGAAGA GAGATTTGCACCCTAGTTATCGCTGAGACTTTCCCTGAAAA < 41bp 1 0.223236958459679 1 0.626985907554626 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PALLD ENSG00000129116 CDS Human protein_coding chr4:169630201 chr4:169630220 nonsynonymous SNV 0.994 3 40 hm5C_associated_SNPs_16427 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:169630207-169630239
64251 chr19 46202132 46202132 1 + G A BLCA 46202126 + 46202106 46202146 41 CTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGC CTACAGCCACTTCCCTCGCACGGTCCACTGGTTCCATCGGC < 41bp 1 0.126799929419906 1 0.925984144210815 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46202126 chr19:46202132 nonsynonymous SNV 0.903 1 27 hm5C_associated_SNPs_16428 0 0 1 SND1 POSTAR2 ENCODE chr19:46202079-46202138
64251 chr11 71946178 71946178 1 + G C BLCA 71946183 + 71946163 71946203 41 AAACCAATTCTGGCTGATATCGAGTACCTGCAGGACCAGCA AAACCAATTCTGGCTCATATCGAGTACCTGCAGGACCAGCA < 41bp 1 0.588828513335593 1 0.789676666259766 experiment 0.822342973328815 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946183 chr11:71946178 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_16429 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:71946160-71946180
64251 chr11 71946178 71946178 1 + G C BLCA 71946190 + 71946170 71946210 41 TTCTGGCTGATATCGAGTACCTGCAGGACCAGCACCTCCTG TTCTGGCTCATATCGAGTACCTGCAGGACCAGCACCTCCTG < 41bp 1 0.751181324335719 1 0.661549031734467 experiment 0.497637351328561 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946190 chr11:71946178 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_16430 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:71946160-71946180
64251 chr6 32944218 32944218 1 + C A BLCA 32944227 + 32944207 32944247 41 TTACTGCAGCTCCTCCAGCCCAGCCCCTTGCCAAGGTATGA TTACTGCAGCTACTCCAGCCCAGCCCCTTGCCAAGGTATGA < 41bp 1 0.27080808845611 1 0.106467097997665 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944227 chr6:32944218 nonsynonymous SNV 0.933 1 12 hm5C_associated_SNPs_16431 0 0 30 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:32944049-32944224
64251 chr3 52011891 52011891 1 + T C BLCA 52011901 + 52011881 52011921 41 CTCCAGACTGTGGTACAGACCTCCATGAGCCGGTCCCAGGT CTCCAGACTGCGGTACAGACCTCCATGAGCCGGTCCCAGGT < 41bp 1 0.790911595653073 1 0.989763617515564 experiment 0.418176808693854 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control ABHD14A ENSG00000114786;ENSG00000248487 CDS Human other chr3:52011901 chr3:52011891 nonsynonymous SNV 0.988 1 11 hm5C_associated_SNPs_16432 0 0 3 DDX3X POSTAR2 ENCODE chr3:52011889-52011943
64251 chr8 9413781 9413781 1 + C T BLCA 9413797 + 9413777 9413817 41 ACTTCATCTGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAG ACTTTATCTGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAG < 41bp 1 0.19119206752845 1 0.196284681558609 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9413797 chr8:9413781 nonsynonymous SNV 0.498 0 5 hm5C_associated_SNPs_16433 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:9413762-9413786
64251 chr1 46073347 46073347 1 + G C BLCA 46073334 + 46073314 46073354 41 CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCAGAGAAAAA CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCACAGAAAAA < 41bp 1 0.657051778104116 1 0.761796176433563 experiment 0.685896443791767 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073334 chr1:46073347 nonsynonymous SNV 0.774 2 34 hm5C_associated_SNPs_16434 0 0 12 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr1:46073340-46073360
64251 chr5 61778976 61778976 1 + C G BLCA 61778983 + 61778963 61779003 41 TACTCCTCTAATTCAGAGATCACTGGAATTTTCTGTAAGCT TACTCCTCTAATTGAGAGATCACTGGAATTTTCTGTAAGCT < 41bp 1 0.136916421511324 1 0.179348737001419 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO11 ENSG00000086200 CDS Human protein_coding chr5:61778983 chr5:61778976 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_16435 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714638 chr5:61778948-61778977
64251 chr11 46387826 46387826 1 + G A BLCA 46387834 + 46387814 46387854 41 CTTTCTTTAGGAGACATTTCCGGGGGAAGGTGCCAGGCCCT CTTTCTTTAGGAAACATTTCCGGGGGAAGGTGCCAGGCCCT < 41bp 1 0.771724258511829 1 0.986172378063202 experiment 0.456551482976342 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46387834 chr11:46387826 nonsynonymous SNV 0.800 0 13 hm5C_associated_SNPs_16438 0 0 2 AKAP8L POSTAR2 ENCODE chr11:46387810-46387878
64251 chr6 149730837 149730837 1 + G C BLCA 149730822 + 149730802 149730842 41 AACCATCCAGCCTTAATTCGCTGTGAACAGTGTGAGATGCC AACCATCCAGCCTTAATTCGCTGTGAACAGTGTGACATGCC < 41bp 1 0.414313561872002 1 0.197544872760773 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TAB2 ENSG00000055208 CDS Human protein_coding chr6:149730822 chr6:149730837 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_16439 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:149730786-149730855
64251 chr15 89835963 89835963 1 + G C BLCA 89835978 + 89835958 89835998 41 TATAAGAATACAGTCATACCCTTACAGCAGGGAGAGGAGGA TATAACAATACAGTCATACCCTTACAGCAGGGAGAGGAGGA < 41bp 1 0.111742717120262 1 0.079216331243515 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FANCI ENSG00000140525 CDS Human protein_coding chr15:89835978 chr15:89835963 nonsynonymous SNV 0.985 3 6 hm5C_associated_SNPs_16441 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:89835933-89835968
64251 chr1 227923158 227923158 1 + G A BLCA 227923153 + 227923133 227923173 41 TTCACTGCGCAGGCGCCGAGCGGCCGAGGCGCCGCGGTCGG TTCACTGCGCAGGCGCCGAGCGGCCAAGGCGCCGCGGTCGG < 41bp 1 0.61678542095653 1 0.733982145786285 experiment 0.76642915808694 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227923153 chr1:227923158 synonymous SNV . 0 26 hm5C_associated_SNPs_16442 0 0 2 DDX3X POSTAR2 ENCODE chr1:227923140-227923204
64251 chr14 73576063 73576063 1 + C T BLCA 73576058 + 73576038 73576078 41 TCACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGCGTG TCACTTTTACAGAGGAAGTGCTCTTTAGAAAAGGTTGCGTG < 41bp 1 0.1452712273047 1 0.140395641326904 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576058 chr14:73576063 stopgain 0.999 1 26 hm5C_associated_SNPs_16443 0 0 18 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr14 73576063 73576063 1 + C T BLCA 73576060 + 73576040 73576080 41 ACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGCGTGAT ACTTTTACAGAGGAAGTGCTCTTTAGAAAAGGTTGCGTGAT < 41bp 1 0.374607969083021 1 0.158947646617889 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576060 chr14:73576063 stopgain 0.999 1 24 hm5C_associated_SNPs_16444 0 0 18 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr14 73576063 73576063 1 + C T BLCA 73576075 + 73576055 73576095 41 GTGCTCTTCAGAAAAGGTTGCGTGATAGAGAAAAGGAAATG GTGCTCTTTAGAAAAGGTTGCGTGATAGAGAAAAGGAAATG < 41bp 1 0.451507610844797 1 0.298324644565582 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576075 chr14:73576063 stopgain 0.999 1 9 hm5C_associated_SNPs_16445 0 0 18 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr20 34776319 34776319 1 + C T BLCA 34776322 + 34776302 34776342 41 TGTGCCAATGGCCTGCTCATCTACCGGGACCGGCTGAGAAT TGTGCCAATGGCCTGCTTATCTACCGGGACCGGCTGAGAAT < 41bp 1 0.467658614557791 1 0.30712503194809 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EPB41L1 ENSG00000088367 CDS Human protein_coding chr20:34776322 chr20:34776319 synonymous SNV . 0 18 hm5C_associated_SNPs_16446 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:34776313-34776337
64251 chr7 106797459 106797459 1 + G C BLCA 106797463 + 106797443 106797483 41 TTCTTTTTTCATTGTAGAATCTGGAGAAGTGAAAATTACTA TTCTTTTTTCATTGTACAATCTGGAGAAGTGAAAATTACTA < 41bp 1 0.798726094239708 1 0.694596707820892 experiment 0.402547811520584 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106797463 chr7:106797459 nonsynonymous SNV 1.000 5 17 hm5C_associated_SNPs_16447 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:106797441-106797471
64251 chr5 73981280 73981280 1 + G A BLCA 73981268 + 73981248 73981288 41 GCGCTGTGGCCCCTGCCGCTCTTGGTGAAGATGACCCCGAA GCGCTGTGGCCCCTGCCGCTCTTGGTGAAGATAACCCCGAA < 41bp 1 0.778416406658617 1 0.766813158988953 experiment 0.443167186682766 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981268 chr5:73981280 nonsynonymous SNV 0.006 1 33 hm5C_associated_SNPs_16448 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:73981269-73981307
64251 chr3 49049462 49049462 1 + G A BLCA 49049444 + 49049424 49049464 41 CCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT CCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTAAT < 41bp 1 0.0465160552582643 1 0.0380955040454865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049444 chr3:49049462 synonymous SNV . 0 39 hm5C_associated_SNPs_16449 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:49049431-49049469
64251 chr6 44219877 44219877 1 + C G BLCA 44219869 + 44219849 44219889 41 AAGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGA AAGGAATTTGATGGGAAGAGCCTGGTCTGAGTTACCAAGGA < 41bp 1 0.31438923274445 1 0.330811530351639 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219869 chr6:44219877 stopgain 0.994 0 29 hm5C_associated_SNPs_16450 0 0 50 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219877 44219877 1 + C G BLCA 44219870 + 44219850 44219890 41 AGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG AGGAATTTGATGGGAAGAGCCTGGTCTGAGTTACCAAGGAG < 41bp 1 0.778406703529794 1 0.187181085348129 experiment 0.443186592940413 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219870 chr6:44219877 stopgain 0.994 0 28 hm5C_associated_SNPs_16451 0 0 50 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219877 44219877 1 + C G BLCA 44219883 + 44219863 44219903 41 GAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGGAGCTGC GAAGAGCCTGGTCTGAGTTACCAAGGAGGGTCTGGAGCTGC < 41bp 1 0.334896704598488 1 0.424097061157227 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219883 chr6:44219877 stopgain 0.994 0 15 hm5C_associated_SNPs_16452 0 0 50 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr17 57754433 57754433 1 + C G BLCA 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG ATCTACATAGACAGTAATAACAACCCGGAGAGATTTGTTCG < 41bp 1 0.256529799379343 1 0.182488173246384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754433 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_16453 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr16 731803 731803 1 + G C BLCA 731817 + 731797 731837 41 CTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGA CTGGAACAGTGCCAGCGAAACCACGAGGGTGATGAGGACGA < 41bp 1 0.357973725592637 1 0.150616079568863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STUB1 ENSG00000103266 CDS Human protein_coding chr16:731817 chr16:731803 nonsynonymous SNV 0.927 1 7 hm5C_associated_SNPs_16455 0 0 1 BUD13 POSTAR2 ENCODE chr16:731786-731834
64251 chr3 111667878 111667878 1 + G A BLCA 111667867 + 111667847 111667887 41 GTTTCCTGCTGATGCTGATGCTGTTGCCACTGAGCCTGCCA GTTTCCTGCTGATGCTGATGCTGTTGCCACTAAGCCTGCCA < 41bp 1 0.263185142093561 1 0.116549760103226 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111667867 chr3:111667878 nonsynonymous SNV 0.990 0 32 hm5C_associated_SNPs_16456 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:111667854-111667882
64251 chr19 32973094 32973094 1 + G C BLCA 32973083 + 32973063 32973103 41 AACCTGCCTCCCTACGTGGCCTACTTCACCAGAGTGTTCCA AACCTGCCTCCCTACGTGGCCTACTTCACCACAGTGTTCCA < 41bp 1 0.197545900969069 1 0.0783534944057465 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32973083 chr19:32973094 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_16457 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:32973081-32973113
64251 chr7 55259449 55259449 1 + G A BLCA 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCACGA < 41bp 1 0.0773911785719062 1 0.353093475103378 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259449 nonsynonymous SNV 0.963 4 38 hm5C_associated_SNPs_16458 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr11 130011399 130011399 1 + G T BLCA 130011408 + 130011388 130011428 41 TTCAGGTCATTGACGAGACTCTGGATGTTAAGGAAATGATT TTCAGGTCATTTACGAGACTCTGGATGTTAAGGAAATGATT < 41bp 1 0.725230417735508 1 0.631905436515808 experiment 0.549539164528984 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130011408 chr11:130011399 nonsynonymous SNV 0.948 5 12 hm5C_associated_SNPs_16459 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221667 chr11:130011380-130011400
64251 chr3 41278172 41278172 1 + T A BLCA 41278166 + 41278146 41278186 41 TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGCCAA TTCAGTTGAGCTGACCAGCTCTCTCTACAGAACAGAGCCAA < 41bp 1 0.337658771655328 1 0.475373774766922 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41278166 chr3:41278172 nonsynonymous SNV 0.999 1 27 hm5C_associated_SNPs_16460 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41278082-41278174
64251 chr9 137328331 137328331 1 + C G BLCA 137328316 + 137328296 137328336 41 AGACCTGTTCCCTGCAGGTTCGCTAAGCTCTTGCTCCGCCT AGACCTGTTCCCTGCAGGTTCGCTAAGCTCTTGCTGCGCCT < 41bp 1 0.368240682641574 1 0.3035868704319 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137328316 chr9:137328331 synonymous SNV . 0 36 hm5C_associated_SNPs_16464 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:137328317-137328390
64251 chrX 55033806 55033806 1 + C T BLCA 55033813 + 55033793 55033833 41 GTGTGCCAGGCCCCGGGGTCCTCCCACTGACCCCTCCTCCC GTGTGCCAGGCCCTGGGGTCCTCCCACTGACCCCTCCTCCC < 41bp 1 0.508446321686637 1 0.27681440114975 experiment 0.983107356626726 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033813 chrX:55033806 nonsynonymous SNV 0.922 2 14 hm5C_associated_SNPs_16465 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:55033747-55033851
64251 chr19 55898022 55898022 1 + G A BLCA 55898006 + 55897986 55898026 41 ATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCGACGG ATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCAACGG < 41bp 1 0.643621943989631 1 0.50504469871521 experiment 0.712756112020738 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898006 chr19:55898022 nonsynonymous SNV 0.925 2 37 hm5C_associated_SNPs_16467 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr19 55898022 55898022 1 + G A BLCA 55898017 + 55897997 55898037 41 GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCG GACTGTGGGCGTGGAGCCGGCAGCCAACGGCAAAGGTGTCG < 41bp 1 0.422193458434909 1 0.293293356895447 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898017 chr19:55898022 nonsynonymous SNV 0.925 2 26 hm5C_associated_SNPs_16468 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr1 183096378 183096378 1 + G A BLCA 183096385 + 183096365 183096405 41 TGACTGTCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAG TGACTGTCATCCTAAGGGATCTCTTTCACTTCAGTGCAAAG < 41bp 1 0.0351619045755962 1 0.046731024980545 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183096385 chr1:183096378 nonsynonymous SNV 0.990 2 14 hm5C_associated_SNPs_16469 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:183096377-183096378
64251 chr1 183096378 183096378 1 + G A BLCA 183096391 + 183096371 183096411 41 TCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAGATGATG TCATCCTAAGGGATCTCTTTCACTTCAGTGCAAAGATGATG < 41bp 1 0.0731117985241779 1 0.111715108156204 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183096391 chr1:183096378 nonsynonymous SNV 0.990 2 8 hm5C_associated_SNPs_16470 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:183096377-183096378
64251 chr20 39797452 39797452 1 + G A BLCA 39797451 + 39797431 39797471 41 TACAAGGCCCAGAGGGAGGACGAGCTGACCTTCATCAAGAG TACAAGGCCCAGAGGGAGGACAAGCTGACCTTCATCAAGAG < 41bp 1 0.234175798378969 1 0.461054086685181 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39797451 chr20:39797452 nonsynonymous SNV 0.868 4 22 hm5C_associated_SNPs_16471 0 0 5 BUD13 POSTAR2 ENCODE chr20:39797413-39797457
64251 chr8 37554677 37554677 1 + G A BLCA 37554680 + 37554660 37554700 41 CAGCTGGACGCCAAGAAGAGCCCCTTGGCGCTGCTGGCTCA CAGCTGGACGCCAAGAAAAGCCCCTTGGCGCTGCTGGCTCA < 41bp 1 0.219685221406368 1 0.118014276027679 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF703 ENSG00000183779 CDS Human protein_coding chr8:37554680 chr8:37554677 synonymous SNV . 0 18 hm5C_associated_SNPs_16472 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:37554660-37554680
64251 chr8 145535411 145535411 1 + C G BLCA 145535406 + 145535386 145535426 41 GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCC GCCCCCTCCCCAGCCTACAGCAGCTGCAGCCTCTACGCCCC < 41bp 1 0.474986614734199 1 0.368005990982056 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535406 chr8:145535411 nonsynonymous SNV 0.993 2 26 hm5C_associated_SNPs_16474 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145535396-145535434
64251 chr19 58772798 58772798 1 + G A BLCA 58772785 + 58772765 58772805 41 TCAGTGAAGAAAAGTGATGACTGTAAGGATTATGGAAACCT TCAGTGAAGAAAAGTGATGACTGTAAGGATTATAGAAACCT < 41bp 1 0.410540907534583 1 0.177733987569809 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58772785 chr19:58772798 nonsynonymous SNV 0.075 1 34 hm5C_associated_SNPs_16475 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58772701-58772801
64251 chr7 158672547 158672547 1 + C T BLCA 158672551 + 158672531 158672571 41 AAAAGTAATTCATTCTCTGACAAAGGGGAAGAAAGACATAA AAAAGTAATTCATTCTTTGACAAAGGGGAAGAAAGACATAA < 41bp 1 0.292473586291827 1 0.443084418773651 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158672551 chr7:158672547 nonsynonymous SNV 0.012 0 17 hm5C_associated_SNPs_16476 0 0 1 AARS POSTAR2 ENCODE chr7:158672506-158672565
64251 chr19 58772799 58772799 1 + G T BLCA 58772785 + 58772765 58772805 41 TCAGTGAAGAAAAGTGATGACTGTAAGGATTATGGAAACCT TCAGTGAAGAAAAGTGATGACTGTAAGGATTATGTAAACCT < 41bp 1 0.438479779698879 1 0.136871218681335 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58772785 chr19:58772799 nonsynonymous SNV 0.092 3 35 hm5C_associated_SNPs_16477 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58772701-58772801
64251 chr12 6976718 6976718 1 + C T BLCA 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTTGGCT < 41bp 1 0.468942818690623 1 0.0396610200405121 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976718 synonymous SNV . 0 37 hm5C_associated_SNPs_16478 0 0 2 DDX3X POSTAR2 ENCODE chr12:6976699-6976744
64251 chr16 28842303 28842303 1 + A G BLCA 28842286 + 28842266 28842306 41 AAAAAAAAACCAAACAGGCCCTTCCCGCATGTCCCCAAAGG AAAAAAAAACCAAACAGGCCCTTCCCGCATGTCCCCAGAGG < 41bp 1 0.0276171490316376 1 0.132897883653641 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28842286 chr16:28842303 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_16481 0 0 2 PRPF8 POSTAR2 ENCODE chr16:28842279-28842305
64251 chr20 31021631 31021631 1 + G A BLCA 31021621 + 31021601 31021641 41 TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAAATCGTCAGTC < 41bp 1 0.170137440490904 1 0.190824210643768 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021621 chr20:31021631 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_16488 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:31021611-31021648
64251 chr12 51034594 51034594 1 + G A BLCA 51034590 + 51034570 51034610 41 CTTCTGCTCCCTCTAAGTACCACCGAACTCGATCTGGGGGA CTTCTGCTCCCTCTAAGTACCACCAAACTCGATCTGGGGGA < 41bp 1 0.774088460665415 1 0.665178179740906 experiment 0.45182307866917 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51034590 chr12:51034594 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_16489 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr12:51034563-51034594
64251 chr16 24826603 24826603 1 + C G BLCA 24826598 + 24826578 24826618 41 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG CCACGTGCCAAATCGCCTAACGGCTGTAGCAGTGTTAATTG < 41bp 1 0.539973458720879 1 0.111861914396286 experiment 0.920053082558241 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24826598 chr16:24826603 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_16491 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:24826584-24826609
64251 chr12 57560824 57560824 1 + C T BLCA 57560805 + 57560785 57560825 41 TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTCG TGGATGACGACTGTGGGGACCGCTCTGATGAGTCTGCTTTG < 41bp 1 0.0576985051078638 1 0.197162836790085 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57560805 chr12:57560824 nonsynonymous SNV 0.360 4 40 hm5C_associated_SNPs_16493 0 0 1 RPS3 POSTAR2 ENCODE chr12:57560800-57560825
64251 chr3 33906752 33906752 1 + C T BLCA 33906745 + 33906725 33906765 41 TTTCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTC TTTCTTATAGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTC < 41bp 1 0.363862136489389 1 0.0805998146533966 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906745 chr3:33906752 synonymous SNV . 0 28 hm5C_associated_SNPs_16494 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906752 33906752 1 + C T BLCA 33906746 + 33906726 33906766 41 TTCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCC TTCTTATAGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCC < 41bp 1 0.128889274876816 1 0.0745579600334167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906746 chr3:33906752 synonymous SNV . 0 27 hm5C_associated_SNPs_16495 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906752 33906752 1 + C T BLCA 33906747 + 33906727 33906767 41 TCTTATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCA TCTTATAGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCCA < 41bp 1 0.426587350160494 1 0.0962844491004944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906747 chr3:33906752 synonymous SNV . 0 26 hm5C_associated_SNPs_16496 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906752 33906752 1 + C T BLCA 33906750 + 33906730 33906770 41 TATAGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCA TATAGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCCACCA < 41bp 1 0.047846003722099 1 0.543583333492279 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906750 chr3:33906752 synonymous SNV . 0 23 hm5C_associated_SNPs_16497 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906752 33906752 1 + C T BLCA 33906753 + 33906733 33906773 41 AGCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCT AGCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCCACCACCT < 41bp 1 0.237106472183631 1 0.312452852725983 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906753 chr3:33906752 synonymous SNV . 0 20 hm5C_associated_SNPs_16498 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr3 33906752 33906752 1 + C T BLCA 33906754 + 33906734 33906774 41 GCCTACTAAGCCCCAGCCCCCAGCCAGGCCTCCACCACCTG GCCTACTAAGCCCCAGCCTCCAGCCAGGCCTCCACCACCTG < 41bp 1 0.40126800281876 1 0.211411476135254 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906754 chr3:33906752 synonymous SNV . 0 19 hm5C_associated_SNPs_16499 0 0 3 RPS3 POSTAR2 ENCODE chr3:33906734-33906850
64251 chr1 39908201 39908201 1 + G T BLCA 39908204 + 39908184 39908224 41 AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGAG AGAGACCAATAAGTGGATACCCAAAAGTCATTGAAGTTGAG < 41bp 1 0.0734066899369625 1 0.252525329589844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39908204 chr1:39908201 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_16500 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39908132-39908231
64251 chr6 158449892 158449892 1 + C T BLCA 158449888 + 158449868 158449908 41 ATCACTGCCACTGACTTTTACCCTCTTCAGGAAGAGGCCAA ATCACTGCCACTGACTTTTACCCTTTTCAGGAAGAGGCCAA < 41bp 1 0.0683232219067267 1 0.0477698445320129 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158449888 chr6:158449892 nonsynonymous SNV 0.475 4 25 hm5C_associated_SNPs_16502 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:158449880-158449900
64251 chr1 116932235 116932235 1 + C G BLCA 116932239 + 116932219 116932259 41 TCTTTCTTCATCCTTTCTCTCATCCTTGAGTACACCTGGCT TCTTTCTTCATCCTTTGTCTCATCCTTGAGTACACCTGGCT < 41bp 1 0.120700191486313 1 0.194050043821335 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116932239 chr1:116932235 nonsynonymous SNV 0.982 5 17 hm5C_associated_SNPs_16503 0 0 29 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:116932160-116932240
64251 chr19 12779345 12779345 1 + C T BLCA 12779329 + 12779309 12779349 41 ACTTGTTCTGTAGGGCAAGTCTCACATGAAGCTACTCATCA ACTTGTTCTGTAGGGCAAGTCTCACATGAAGCTACTTATCA < 41bp 1 0.256899415094869 1 0.0433531105518341 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WDR83OS ENSG00000105583 CDS Human protein_coding chr19:12779329 chr19:12779345 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_16504 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12779327-12779360
64251 chr19 12779348 12779348 1 + C T BLCA 12779329 + 12779309 12779349 41 ACTTGTTCTGTAGGGCAAGTCTCACATGAAGCTACTCATCA ACTTGTTCTGTAGGGCAAGTCTCACATGAAGCTACTCATTA < 41bp 1 0.282600653739689 1 0.0442149937152863 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WDR83OS ENSG00000105583 CDS Human protein_coding chr19:12779329 chr19:12779348 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_16505 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12779327-12779360
64251 chr5 179137026 179137026 1 + G C BLCA 179137028 + 179137008 179137048 41 GCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAA GCCAGATGCAGATCTGAACACCTATTTTACTGATAAGAAAA < 41bp 1 0.0742359230952474 1 0.103849053382874 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179137028 chr5:179137026 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_16506 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179136884-179137047
64251 chr6 170632213 170632213 1 + A G BLCA 170632211 + 170632191 170632231 41 GCAGAAAGCTACCTGGTGTACAACATCATGAGCAGTGGAGA GCAGAAAGCTACCTGGTGTACAGCATCATGAGCAGTGGAGA < 41bp 1 0.677040193664259 1 0.116970360279083 experiment 0.645919612671483 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM120B ENSG00000112584 CDS Human protein_coding chr6:170632211 chr6:170632213 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_16507 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:170632196-170632221
64251 chr17 7810488 7810488 1 + C G BLCA 7810504 + 7810484 7810524 41 ACCTCTTGAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGC ACCTGTTGAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGC < 41bp 1 0.529782436145595 1 0.420634567737579 experiment 0.94043512770881 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810504 chr17:7810488 nonsynonymous SNV 0.967 1 5 hm5C_associated_SNPs_16508 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:7810478-7810513
64251 chr9 139734253 139734253 1 + G A BLCA 139734259 + 139734239 139734279 41 GCCTTCAGACTGAAGAATGACTCGGACCTCTTCGGGCTGGG GCCTTCAGACTGAAAAATGACTCGGACCTCTTCGGGCTGGG < 41bp 1 0.692331011339556 1 0.393238335847855 experiment 0.615337977320887 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734259 chr9:139734253 synonymous SNV . 0 15 hm5C_associated_SNPs_16510 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:139734226-139734257
64251 chr9 139734253 139734253 1 + G A BLCA 139734265 + 139734245 139734285 41 AGACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGA AGACTGAAAAATGACTCGGACCTCTTCGGGCTGGGGCTGGA < 41bp 1 0.0419058057008594 1 0.0440157353878021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734265 chr9:139734253 synonymous SNV . 0 9 hm5C_associated_SNPs_16511 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:139734226-139734257
64251 chr9 139734253 139734253 1 + G A BLCA 139734266 + 139734246 139734286 41 GACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG GACTGAAAAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG < 41bp 1 0.0969007925225546 1 0.126247972249985 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734266 chr9:139734253 synonymous SNV . 0 8 hm5C_associated_SNPs_16512 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:139734226-139734257
64251 chr9 139734253 139734253 1 + G A BLCA 139734271 + 139734251 139734291 41 AAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC AAAAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC < 41bp 1 0.685101540576394 1 0.91473263502121 experiment 0.629796918847212 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734271 chr9:139734253 synonymous SNV . 0 3 hm5C_associated_SNPs_16513 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:139734226-139734257
64251 chr11 108151820 108151820 1 + C T BLCA 108151830 + 108151810 108151850 41 GTAGCCCTATCTGCGAAAAACAGGCTTTGTTTGCCCTGTGT GTAGCCCTATTTGCGAAAAACAGGCTTTGTTTGCCCTGTGT < 41bp 1 0.333377324799937 1 0.456506729125977 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108151830 chr11:108151820 synonymous SNV . 0 11 hm5C_associated_SNPs_16514 0 0 2 EIF3H POSTAR2 ENCODE chr11:108151806-108151858
64251 chr12 105553817 105553817 1 + C T BLCA 105553821 + 105553801 105553841 41 GATCACACACGAAATTCTGCCGAAGGCACAGAATATTTCAA GATCACACACGAAATTTTGCCGAAGGCACAGAATATTTCAA < 41bp 1 0.478323771949485 1 0.493763327598572 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105553821 chr12:105553817 nonsynonymous SNV 0.997 1 17 hm5C_associated_SNPs_16515 0 0 1 PPIG POSTAR2 ENCODE chr12:105553791-105553828
64251 chr1 154988787 154988787 1 + G C BLCA 154988768 + 154988748 154988788 41 TCATGCCCGCACTGCCCAGCCCGCTTCCTGCACAGCTACGA TCATGCCCGCACTGCCCAGCCCGCTTCCTGCACAGCTACCA < 41bp 1 0.204698578179876 1 0.0983605980873108 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988768 chr1:154988787 nonsynonymous SNV 0.982 2 40 hm5C_associated_SNPs_16516 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:154988770-154988810
64251 chr6 42854069 42854069 1 + C T BLCA 42854083 + 42854063 42854103 41 AGATCTCATGGTTCTTGTGCCCTTTCCACCTCTCAGTGGCC AGATCTTATGGTTCTTGTGCCCTTTCCACCTCTCAGTGGCC < 41bp 1 0.0125533471282928 1 0.0326441526412964 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 CDS Human protein_coding chr6:42854083 chr6:42854069 nonsynonymous SNV 0.273 1 7 hm5C_associated_SNPs_16517 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:42854052-42854097
64251 chr3 20019815 20019815 1 + A C BLCA 20019825 + 20019805 20019845 41 GCACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA GCACAGTCCTCTGCAGATGACAATAGTTTATTATTCATGGA < 41bp 1 0.486593836889217 1 0.0920608043670654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019825 chr3:20019815 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_16518 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:20019801-20019847
64251 chr22 32889255 32889255 1 + G A BLCA 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTATATCTACGTGATTTTCGAGGTGAT < 41bp 1 0.45685197556668 1 0.432032644748688 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889255 synonymous SNV . 0 23 hm5C_associated_SNPs_16519 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32889222-32889255
64251 chr20 39986944 39986944 1 + C T BLCA 39986960 + 39986940 39986980 41 GTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGA GTTTTTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGA < 41bp 1 0.0132515441849418 1 0.113916754722595 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39986960 chr20:39986944 synonymous SNV . 0 5 hm5C_associated_SNPs_16520 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:39986940-39986960
64251 chr1 112305380 112305380 1 + C T BLCA 112305377 + 112305357 112305397 41 TGGATTGGGAGACATACATGCATCGGATTGGGAGAGCTGGC TGGATTGGGAGACATACATGCATTGGATTGGGAGAGCTGGC < 41bp 1 0.318433680758363 1 0.109291911125183 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305377 chr1:112305380 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_16523 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr1:112305350-112305386
64251 chr16 84695566 84695566 1 + G T BLCA 84695562 + 84695542 84695582 41 GGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGT GGCGGCTACAGCTGGGAGAACACTTCCTTCTCCAAGACCGT < 41bp 1 0.108771647720024 1 0.144411772489548 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695562 chr16:84695566 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_16524 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84695533-84695566
64251 chr1 46073334 46073334 1 + C A BLCA 46073326 + 46073306 46073346 41 AGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAGAGTGCA AGAAAAATCAGTTTCTGGAACTGATGTCAAAGAAGAGTGCA < 41bp 1 0.452308676175922 1 0.0689040422439575 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073326 chr1:46073334 nonsynonymous SNV 0.005 2 29 hm5C_associated_SNPs_16525 0 0 10 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:46073320-46073340
64251 chr1 28099877 28099877 1 + G C BLCA 28099858 + 28099838 28099878 41 ACATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCGG ACATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCCG < 41bp 1 0.126859697222975 1 0.104141652584076 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STX12 ENSG00000117758 CDS Human protein_coding chr1:28099858 chr1:28099877 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_16526 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr1 28099877 28099877 1 + G C BLCA 28099859 + 28099839 28099879 41 CATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCGGG CATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCCGG < 41bp 1 0.310394929915421 1 0.378759652376175 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STX12 ENSG00000117758 CDS Human protein_coding chr1:28099859 chr1:28099877 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_16527 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr1 28099877 28099877 1 + G C BLCA 28099867 + 28099847 28099887 41 GGAACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGC GGAACCCGGGGCCCTCGGGGCCCCAGCTCCCGGACTTCAGC < 41bp 1 0.537526086586728 1 0.274555057287216 experiment 0.924947826826544 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099867 chr1:28099877 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_16528 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr1 28099877 28099877 1 + G C BLCA 28099868 + 28099848 28099888 41 GAACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCA GAACCCGGGGCCCTCGGGGCCCCAGCTCCCGGACTTCAGCA < 41bp 1 0.412067730372136 1 0.372327089309692 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099868 chr1:28099877 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_16529 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr1 28099877 28099877 1 + G C BLCA 28099869 + 28099849 28099889 41 AACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCAG AACCCGGGGCCCTCGGGGCCCCAGCTCCCGGACTTCAGCAG < 41bp 1 0.440502829730755 1 0.369233369827271 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099869 chr1:28099877 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_16530 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr1 28099877 28099877 1 + G C BLCA 28099870 + 28099850 28099890 41 ACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCAGC ACCCGGGGCCCTCGGGGCCCCAGCTCCCGGACTTCAGCAGC < 41bp 1 0.699923310103864 1 0.384572744369507 experiment 0.600153379792271 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099870 chr1:28099877 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_16531 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr17 7788214 7788214 1 + G C BLCA 7788211 + 7788191 7788231 41 GAGGAGGAAGAAGAGGGCGACGAGGAGGAGGAGGAGGAGGT GAGGAGGAAGAAGAGGGCGACGACGAGGAGGAGGAGGAGGT < 41bp 1 0.282026637638095 1 0.328117072582245 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHD3 ENSG00000170004 CDS Human protein_coding chr17:7788211 chr17:7788214 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_16532 0 0 5 CPSF6 POSTAR2 ENCODE chr17:7788169-7788252
64251 chr21 30701862 30701862 1 + C G BLCA 30701844 + 30701824 30701864 41 ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAG ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTGAG < 41bp 1 0.15433166565686 1 0.200887799263 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BACH1 ENSG00000156273 CDS Human protein_coding chr21:30701844 chr21:30701862 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_16533 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30701822-30701863
64251 chr7 98588176 98588176 1 + G T BLCA 98588173 + 98588153 98588193 41 CCACCCATCCAGTGGCTGGCCTGGATCCCACAGCTGCTCAC CCACCCATCCAGTGGCTGGCCTGTATCCCACAGCTGCTCAC < 41bp 1 0.377013632342089 1 0.231290489435196 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98588173 chr7:98588176 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_16534 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98588175-98588204
64251 chr18 56402448 56402448 1 + A T BLCA 56402451 + 56402431 56402471 41 AAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTG AAGGTGTCAAGGAGCAGTAGCTTTTGAAATCCAGCATTCTG < 41bp 1 0.0378836394479163 1 0.0233138799667358 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56402451 chr18:56402448 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_16535 0 0 4 BUD13 POSTAR2 ENCODE chr18:56402387-56402474
64251 chr14 93299516 93299516 1 + G A BLCA 93299518 + 93299498 93299538 41 AGTCTGAGTTAGAAAATCGACTCCATCAGCTAACAGAGACT AGTCTGAGTTAGAAAATCAACTCCATCAGCTAACAGAGACT < 41bp 1 0.760857452240291 1 0.793993413448334 experiment 0.478285095519418 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299518 chr14:93299516 nonsynonymous SNV 0.793 3 19 hm5C_associated_SNPs_16536 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93299508-93299540
64251 chr19 50302947 50302947 1 + G A BLCA 50302928 + 50302908 50302948 41 GGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGG GGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCAG < 41bp 1 0.667187669708576 1 0.790114998817444 experiment 0.665624660582848 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302928 chr19:50302947 nonsynonymous SNV 0.980 1 40 hm5C_associated_SNPs_16537 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:50302920-50302951
64251 chr8 145535421 145535421 1 + C T BLCA 145535406 + 145535386 145535426 41 GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCC GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTATGCCCC < 41bp 1 0.319677050871426 1 0.336969494819641 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535406 chr8:145535421 synonymous SNV . 0 36 hm5C_associated_SNPs_16538 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145535396-145535434
64251 chr7 76112191 76112191 1 + G T BLCA 76112193 + 76112173 76112213 41 GAACTGGCCCCGTGTCAGGCCGCTACCGCCACTCCATGACC GAACTGGCCCCGTGTCAGTCCGCTACCGCCACTCCATGACC < 41bp 1 0.474646020061592 1 0.255779266357422 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112193 chr7:76112191 nonsynonymous SNV 1.000 0 19 hm5C_associated_SNPs_16539 0 0 2 RBM15 POSTAR2 ENCODE chr7:76112147-76112204
64251 chr2 235943684 235943684 1 + G A BLCA 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGACCTCCCTCGCTGCAAGTCAGAGGGGACC < 41bp 1 0.179054833884083 1 0.0920104682445526 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943684 nonsynonymous SNV 0.755 0 13 hm5C_associated_SNPs_16540 0 0 3 DDX3X POSTAR2 ENCODE chr2:235943656-235943692
64251 chr8 1791542 1791542 1 + G C BLCA 1791535 + 1791515 1791555 41 GCAGGAGCTCCTTCCCTTAACAGAGCTGAGAGAGGCATCTG GCAGGAGCTCCTTCCCTTAACAGAGCTCAGAGAGGCATCTG < 41bp 1 0.664620450884637 1 0.403244733810425 experiment 0.670759098230726 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1791535 chr8:1791542 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_16542 0 0 3 DDX24 POSTAR2 ENCODE chr8:1791516-1791562
64251 chr8 1791542 1791542 1 + G C BLCA 1791550 + 1791530 1791570 41 CTTAACAGAGCTGAGAGAGGCATCTGGAGCTGCAGCATGGA CTTAACAGAGCTCAGAGAGGCATCTGGAGCTGCAGCATGGA < 41bp 1 0.278487665268487 1 0.217805743217468 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1791550 chr8:1791542 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_16543 0 0 3 DDX24 POSTAR2 ENCODE chr8:1791516-1791562
64251 chr8 145150898 145150898 1 + C T BLCA 145150914 + 145150894 145150934 41 GTCTCACCGTGGCCTCCTCTCTTCCTTGGACCACACCAGGT GTCTTACCGTGGCCTCCTCTCTTCCTTGGACCACACCAGGT < 41bp 1 0.333053564890733 1 0.678526341915131 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150914 chr8:145150898 nonsynonymous SNV 0.961 4 5 hm5C_associated_SNPs_16544 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145150893-145150921
64251 chr6 158922935 158922935 1 + C G BLCA 158922933 + 158922913 158922953 41 AGTGCCACCCAGTACCCAGTCTCCAACCGGTACTCCAATCC AGTGCCACCCAGTACCCAGTCTGCAACCGGTACTCCAATCC < 41bp 1 0.643302440042069 1 0.673686325550079 experiment 0.713395119915862 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control TULP4 ENSG00000130338 CDS Human protein_coding chr6:158922933 chr6:158922935 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_16545 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:158922931-158922955
64251 chr5 167826567 167826567 1 + G A BLCA 167826565 + 167826545 167826585 41 AAGAGCGTGGCTTTCAGACCCTGAAGAAGTAAGTACACCCT AAGAGCGTGGCTTTCAGACCCTAAAGAAGTAAGTACACCCT < 41bp 1 0.534820578898643 1 0.263140916824341 experiment 0.930358842202714 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WWC1 ENSG00000113645 CDS Human protein_coding chr5:167826565 chr5:167826567 synonymous SNV . 0 23 hm5C_associated_SNPs_16546 0 0 2 BUD13 POSTAR2 ENCODE chr5:167826521-167826588
64251 chr19 17417054 17417054 1 + C A BLCA 17417040 + 17417020 17417060 41 CCTCCCCACCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGA CCTCCCCACCCCGCAGCAGGCCCGGGGCAAGGCTAGCGGGA < 41bp 1 0.769858803568448 1 0.688392162322998 experiment 0.460282392863105 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417040 chr19:17417054 nonsynonymous SNV 0.350 4 35 hm5C_associated_SNPs_16548 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17417009-17417062
64251 chr19 17417054 17417054 1 + C A BLCA 17417041 + 17417021 17417061 41 CTCCCCACCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAA CTCCCCACCCCGCAGCAGGCCCGGGGCAAGGCTAGCGGGAA < 41bp 1 0.706936207827981 1 0.724814832210541 experiment 0.586127584344039 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417041 chr19:17417054 nonsynonymous SNV 0.350 4 34 hm5C_associated_SNPs_16549 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17417009-17417062
64251 chr19 17417054 17417054 1 + C A BLCA 17417047 + 17417027 17417067 41 ACCCCGCAGCAGGCCCGGGGCAAGGCTCGCGGGAATGAGTA ACCCCGCAGCAGGCCCGGGGCAAGGCTAGCGGGAATGAGTA < 41bp 1 0.793565810322314 1 0.646205186843872 experiment 0.412868379355373 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417047 chr19:17417054 nonsynonymous SNV 0.350 4 28 hm5C_associated_SNPs_16550 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17417009-17417062
64251 chr16 22271812 22271812 1 + A G BLCA 22271796 + 22271776 22271816 41 TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAACATGGC TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAACGTGGC < 41bp 1 0.379747379260473 1 0.746522307395935 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22271796 chr16:22271812 nonsynonymous SNV 0.802 0 37 hm5C_associated_SNPs_16551 0 0 3 DDX24 POSTAR2 ENCODE chr16:22271802-22271841
64251 chr1 10328316 10328316 1 + G A BLCA 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATAATGAGACCAACCTTTCCACTAAGAAGGTAGG < 41bp 1 0.0032145139349926 1 0.0657700300216675 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328316 nonsynonymous SNV 0.999 5 31 hm5C_associated_SNPs_16552 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chr9 106874033 106874033 1 + C G BLCA 106874053 + 106874033 106874073 41 CTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA GTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA < 41bp 1 0.432410895361131 1 0.410792410373688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106874053 chr9:106874033 nonsynonymous SNV 0.994 5 1 hm5C_associated_SNPs_16554 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:106873999-106874037
64251 chr10 73992847 73992847 1 + G T BLCA 73992860 + 73992840 73992880 41 AGCAGCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTGC AGCAGCTTCTGGGATTCACCCCCTCTTCAGGTTGATACTGC < 41bp 1 0.167196072174654 1 0.0890012383460999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73992860 chr10:73992847 synonymous SNV . 0 8 hm5C_associated_SNPs_16555 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:73992818-73992966
64251 chr22 20079084 20079084 1 + C A BLCA 20079093 + 20079073 20079113 41 GCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA GCAGGCGGAGTACGAGAGGCCCATCTTGCCAGCCAATCAGA < 41bp 1 0.0537462428228983 1 0.130802482366562 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079093 chr22:20079084 nonsynonymous SNV 0.926 2 12 hm5C_associated_SNPs_16556 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:20079080-20079100
64251 chr1 12061880 12061880 1 + A T BLCA 12061870 + 12061850 12061890 41 AAGTGAGGATGTTTGAGTTTCAGAATTTTGAGAGGAGATTT AAGTGAGGATGTTTGAGTTTCAGAATTTTGTGAGGAGATTT < 41bp 1 0.611597846926254 1 0.550802826881409 experiment 0.776804306147491 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061870 chr1:12061880 nonsynonymous SNV 0.996 5 31 hm5C_associated_SNPs_16557 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:12061848-12061882
64251 chr3 50006080 50006080 1 + G C BLCA 50006076 + 50006056 50006096 41 GATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCT GATTACAGAAGCATGGAGTACCGTCATGTGGATCATAGGCT < 41bp 1 0.0570360431201876 1 0.0572609007358551 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50006076 chr3:50006080 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_16558 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:50006060-50006080
64251 chr11 63996776 63996776 1 + G A BLCA 63996766 + 63996746 63996786 41 CAGCCCCTGCTGTTGGGCATCGCCCGAAATGAGACCAGTGC CAGCCCCTGCTGTTGGGCATCGCCCGAAATAAGACCAGTGC < 41bp 1 0.535875224621213 1 0.35752409696579 experiment 0.928249550757573 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63996766 chr11:63996776 nonsynonymous SNV 0.943 1 31 hm5C_associated_SNPs_16559 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:63996772-63996812
64251 chr6 151671634 151671634 1 + G A BLCA 151671614 + 151671594 151671634 41 AAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGG AAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGA < 41bp 1 0.042129302380673 1 0.118367522954941 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671614 chr6:151671634 nonsynonymous SNV 0.015 0 41 hm5C_associated_SNPs_16560 0 0 2 GRWD1 POSTAR2 ENCODE chr6:151671560-151671634
64251 chr15 29346684 29346684 1 + G A BLCA 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAAGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG < 41bp 1 0.748456041450684 1 0.229097694158554 experiment 0.503087917098631 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346684 synonymous SNV . 0 6 hm5C_associated_SNPs_16561 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346684 29346684 1 + G A BLCA 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAAGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT < 41bp 1 0.718273618014047 1 0.696541666984558 experiment 0.563452763971907 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346684 synonymous SNV . 0 3 hm5C_associated_SNPs_16562 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr11 598428 598428 1 + C T BLCA 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGTGACTG < 41bp 1 0.109250908914364 1 0.35287743806839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598428 nonsynonymous SNV 0.003 1 36 hm5C_associated_SNPs_16563 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:598424-598451
64251 chr5 154174850 154174850 1 + C G BLCA 154174837 + 154174817 154174857 41 ACCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCAC ACCCTTATTGCTTCCTTCCACCGAGTGCAGGCCGTTACCAC < 41bp 1 0.320508491316999 1 0.469496250152588 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174837 chr5:154174850 nonsynonymous SNV 0.996 4 34 hm5C_associated_SNPs_16564 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154174822-154174855
64251 chr5 154174850 154174850 1 + C G BLCA 154174838 + 154174818 154174858 41 CCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCACT CCCTTATTGCTTCCTTCCACCGAGTGCAGGCCGTTACCACT < 41bp 1 0.371957873739729 1 0.888797879219055 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174838 chr5:154174850 nonsynonymous SNV 0.996 4 33 hm5C_associated_SNPs_16565 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154174822-154174855
64251 chr17 76167700 76167700 1 + C T BLCA 76167712 + 76167692 76167732 41 GCAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGT GCAGCCATTACCTTCAGCTTCTTTTCCATCTTCTCCTGGGT < 41bp 1 0.0521742619516304 1 0.0362574756145477 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167712 chr17:76167700 synonymous SNV . 0 9 hm5C_associated_SNPs_16568 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:76167680-76167708
64251 chr1 109806818 109806818 1 + G A BLCA 109806832 + 109806812 109806852 41 CACTGGGAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCC CACTGGAAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCC < 41bp 1 0.160522840926241 1 0.173907458782196 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806832 chr1:109806818 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_16569 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:109806818-109806819
64251 chr1 109806818 109806818 1 + G A BLCA 109806833 + 109806813 109806853 41 ACTGGGAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCCT ACTGGAAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCCT < 41bp 1 0.18250762813481 1 0.14259946346283 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806833 chr1:109806818 nonsynonymous SNV 0.999 0 6 hm5C_associated_SNPs_16570 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:109806818-109806819
64251 chr1 109806818 109806818 1 + G A BLCA 109806834 + 109806814 109806854 41 CTGGGAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCCTT CTGGAAGCCAGCGGGGGGCCCGGCCATGCCATTCTGTCCTT < 41bp 1 0.315939800978633 1 0.18098521232605 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806834 chr1:109806818 nonsynonymous SNV 0.999 0 5 hm5C_associated_SNPs_16571 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:109806818-109806819
64251 chr16 89628100 89628100 1 + C T BLCA 89628120 + 89628100 89628140 41 CGCTCCAAACTCATCCTCTTCCCCAGGAAGCCCTCGGCCCC TGCTCCAAACTCATCCTCTTCCCCAGGAAGCCCTCGGCCCC < 41bp 1 0.682731703765912 1 0.349055290222168 experiment 0.634536592468176 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89628120 chr16:89628100 nonsynonymous SNV 0.998 0 1 hm5C_associated_SNPs_16572 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89628018-89628126
64251 chr6 44219858 44219858 1 + G A BLCA 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTAAT < 41bp 1 0.625199979193509 1 0.181895166635513 experiment 0.749600041612983 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219858 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_16573 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219858 44219858 1 + G A BLCA 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTAATGGGAAG < 41bp 1 0.744564398155447 1 0.489922970533371 experiment 0.510871203689107 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219858 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_16574 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219858 44219858 1 + G A BLCA 44219869 + 44219849 44219889 41 AAGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGA AAGGAATTTAATGGGAAGAGCCTGGTCTCAGTTACCAAGGA < 41bp 1 0.252235908409549 1 0.212072461843491 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219869 chr6:44219858 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_16575 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219858 44219858 1 + G A BLCA 44219870 + 44219850 44219890 41 AGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG AGGAATTTAATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG < 41bp 1 0.704542655557518 1 0.205835908651352 experiment 0.590914688884964 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219870 chr6:44219858 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_16576 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219858 44219858 1 + G A BLCA 44219875 + 44219855 44219895 41 TTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCT TTTAATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCT < 41bp 1 0.781368134717796 1 0.605527341365814 experiment 0.437263730564408 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219875 chr6:44219858 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_16577 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219858 44219858 1 + G A BLCA 44219877 + 44219857 44219897 41 TGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGG TAATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGG < 41bp 1 0.418150281663961 1 0.196249097585678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219877 chr6:44219858 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_16578 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr22 23596140 23596140 1 + C G BLCA 23596125 + 23596105 23596145 41 AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTCTCGGG AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTGTCGGG < 41bp 1 0.610132429618267 1 0.708578765392303 experiment 0.779735140763466 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23596125 chr22:23596140 synonymous SNV . 0 36 hm5C_associated_SNPs_16581 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23596122-23596160
64251 chr2 202141606 202141606 1 + C G BLCA 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTGTCTGATCATGAACAATCA < 41bp 1 0.25360957100215 1 0.214373171329498 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141606 nonsynonymous SNV 0.988 2 33 hm5C_associated_SNPs_16583 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:202141587-202141622
64251 chr2 38908553 38908553 1 + C T BLCA 38908545 + 38908525 38908565 41 ACACCCTGGATGGCGGAGAGCTCATAGTCAACTACAGAGCA ACACCCTGGATGGCGGAGAGCTCATAGTTAACTACAGAGCA < 41bp 1 0.306247317343882 1 0.113831579685211 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908545 chr2:38908553 synonymous SNV . 0 29 hm5C_associated_SNPs_16584 0 0 2 YBX3 POSTAR2 ENCODE chr2:38908551-38908560
64251 chr21 45736388 45736388 1 + C T BLCA 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGACGCCCTTTGCCTTCGACCGGA < 41bp 1 0.476207090695892 1 0.260987907648087 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736388 nonsynonymous SNV 0.411 5 27 hm5C_associated_SNPs_16588 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736388 45736388 1 + C T BLCA 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGACGCCCTTTGCCTTCGACCGGATC < 41bp 1 0.118826923279986 1 0.0400905013084412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736388 nonsynonymous SNV 0.411 5 25 hm5C_associated_SNPs_16589 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736388 45736388 1 + C T BLCA 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGACGCCCTTTGCCTTCGACCGGATCC < 41bp 1 0.0369643570566952 1 0.0730120241641998 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736388 nonsynonymous SNV 0.411 5 24 hm5C_associated_SNPs_16590 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736388 45736388 1 + C T BLCA 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGACGCCCTTTGCCTTCGACCGGATCCT < 41bp 1 0.172533372666172 1 0.0633589923381805 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736388 nonsynonymous SNV 0.411 5 23 hm5C_associated_SNPs_16591 0 0 10 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr19 39208572 39208572 1 + C T BLCA 39208581 + 39208561 39208601 41 CCCCAGGACATCAACAATGGCTGGCAGCACTTGGAGCAGGC CCCCAGGACATTAACAATGGCTGGCAGCACTTGGAGCAGGC < 41bp 1 0.320607049647355 1 0.153390467166901 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39208581 chr19:39208572 synonymous SNV . 0 12 hm5C_associated_SNPs_16592 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39208560-39208580
64251 chr19 39208572 39208572 1 + C T BLCA 39208590 + 39208570 39208610 41 ATCAACAATGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGG ATTAACAATGGCTGGCAGCACTTGGAGCAGGCTGAGAAGGG < 41bp 1 0.485976789391139 1 0.356881588697433 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39208590 chr19:39208572 synonymous SNV . 0 3 hm5C_associated_SNPs_16593 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39208560-39208580
64251 chr11 34167637 34167637 1 + G A BLCA 34167634 + 34167614 34167654 41 TTTTGATTTTTCTCTAGTGACAAGAAAAGGAAGTTAGAGGC TTTTGATTTTTCTCTAGTGACAAAAAAAGGAAGTTAGAGGC < 41bp 1 0.459042111737666 1 0.423616826534271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34167634 chr11:34167637 synonymous SNV . 0 24 hm5C_associated_SNPs_16594 0 0 1 ZNF622 POSTAR2 ENCODE chr11:34167637-34167682
64251 chr8 21859708 21859708 1 + G C BLCA 21859721 + 21859701 21859741 41 CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGC CCAAGAACAGGACCACACCCCTGAACCAGGAGAGCGACCGC < 41bp 1 0.672233144915013 1 0.854190587997437 experiment 0.655533710169973 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859721 chr8:21859708 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_16595 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr8:21859703-21859723
64251 chr19 54710425 54710425 1 + C T BLCA 54710423 + 54710403 54710443 41 TCCCTATCTCCTATGCAGCCCTCGGAGGTGATGGGTGTGAA TCCCTATCTCCTATGCAGCCCTTGGAGGTGATGGGTGTGAA < 41bp 1 0.360087254147452 1 0.171262264251709 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54710423 chr19:54710425 nonsynonymous SNV 0.084 3 23 hm5C_associated_SNPs_16596 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704215 chr19:54710420-54710440
64251 chr1 163306609 163306609 1 + G A BLCA 163306605 + 163306585 163306625 41 ATTCACTTCAGAGAAGCATGCCGTGAAACGTATATGGAATT ATTCACTTCAGAGAAGCATGCCGTAAAACGTATATGGAATT < 41bp 1 0.246732691030177 1 0.3482785820961 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163306605 chr1:163306609 nonsynonymous SNV 0.988 2 25 hm5C_associated_SNPs_16597 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:163306591-163306614
64251 chr11 65267658 65267658 1 + T A BLCA 65267647 + 65267627 65267667 41 TCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAAC TCAAAAAGCTACTAAAAGGACTGGTGTAATTAAAAAAAAAC < 41bp 1 0.479514910235772 1 0.241367012262344 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267647 chr11:65267658 . . 0 32 hm5C_associated_SNPs_16598 0 0 72 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267640-65267680
64251 chr8 145150823 145150823 1 + G C BLCA 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCGCGGCTGGCCATGGCTCTGCATTCGGCTG < 41bp 1 0.481438288093911 1 0.34917151927948 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150823 nonsynonymous SNV 0.749 4 14 hm5C_associated_SNPs_16599 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145150800-145150824
64251 chr1 179310414 179310414 1 + C T BLCA 179310411 + 179310391 179310431 41 TGTGTTAGCATATACACTGCCACCAGCTTCCCGGTTCATCA TGTGTTAGCATATACACTGCCACTAGCTTCCCGGTTCATCA < 41bp 1 0.493099700345287 1 0.0510377287864685 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179310411 chr1:179310414 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_16602 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:179310220-179310440
64251 chr20 60882753 60882753 1 + C A BLCA 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAACTAGCCAGAGCCCCGCGCCCAGTTCCGGGAATGGAG < 41bp 1 0.265553323816371 1 0.469437628984451 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882753 nonsynonymous SNV 0.151 1 12 hm5C_associated_SNPs_16604 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 60882753 60882753 1 + C A BLCA 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAACTAGCCAGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC < 41bp 1 0.219095940454778 1 0.339968860149384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882753 nonsynonymous SNV 0.151 1 10 hm5C_associated_SNPs_16605 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr3 12531405 12531405 1 + G A BLCA 12531390 + 12531370 12531410 41 CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTC CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAAAATTC < 41bp 1 0.312531318851308 1 0.185144662857056 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12531390 chr3:12531405 nonsynonymous SNV 0.009 1 36 hm5C_associated_SNPs_16606 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12531391-12531477
64251 chr16 57241992 57241992 1 + A G BLCA 57241985 + 57241965 57242005 41 TCCAGTGATCAGGAACCTCCCTATTCAATGATAACATTACA TCCAGTGATCAGGAACCTCCCTATTCAGTGATAACATTACA < 41bp 1 0.101821134582392 1 0.0488901436328888 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57241985 chr16:57241992 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_16607 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:57241976-57242007
64251 chr1 114514536 114514536 1 + G A BLCA 114514546 + 114514526 114514566 41 CGAGCTCAACGCGGGGGGACCAGTGCAGCACAACCACTCAA CGAGCTCAACACGGGGGGACCAGTGCAGCACAACCACTCAA < 41bp 1 0.527302911446074 1 0.652550458908081 experiment 0.945394177107852 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114514546 chr1:114514536 nonsynonymous SNV 0.250 4 11 hm5C_associated_SNPs_16608 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:114514533-114514553
64251 chr4 152024203 152024203 1 + A C BLCA 152024223 + 152024203 152024243 41 AATGACTTGAAAGAAGTGGTCAATAAATTGTAAGTGTTTCT CATGACTTGAAAGAAGTGGTCAATAAATTGTAAGTGTTTCT < 41bp 1 0.338217075914618 1 0.103535771369934 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS3A ENSG00000145425 CDS Human protein_coding chr4:152024223 chr4:152024203 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_16609 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr4:152024146-152024205
64251 chr3 183369003 183369003 1 + G A BLCA 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATAAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT < 41bp 1 0.1018304764915 1 0.208865523338318 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369003 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_16611 0 0 4 FXR1 POSTAR2 ENCODE chr3:183368906-183369003
64251 chr20 47711290 47711290 1 + G C BLCA 47711273 + 47711253 47711293 41 CTTTCTTCCAATCCAGGACTCCATTATTACAGTCTTTGATT CTTTCTTCCAATCCAGGACTCCATTATTACAGTCTTTCATT < 41bp 1 0.0501662838751178 1 0.0806515216827393 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47711273 chr20:47711290 nonsynonymous SNV 0.990 4 38 hm5C_associated_SNPs_16612 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47711275-47711445
64251 chr2 32656088 32656088 1 + C G BLCA 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTGAA < 41bp 1 0.266504452621467 1 0.135700821876526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656088 nonsynonymous SNV 0.937 3 39 hm5C_associated_SNPs_16613 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:32656080-32656100
64251 chr10 71855428 71855428 1 + G A BLCA 71855433 + 71855413 71855453 41 TCCTTAACCCAGAGTGACATCAGCCATATTGGCTCCATGAG TCCTTAACCCAGAGTAACATCAGCCATATTGGCTCCATGAG < 41bp 1 0.432937717802807 1 0.342587500810623 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71855433 chr10:71855428 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_16616 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:71855426-71855453
64251 chr5 110097168 110097168 1 + C T BLCA 110097160 + 110097140 110097180 41 TGTGCAGAGTATGTTGGATGCTTATTTTCCAGAACTTATTG TGTGCAGAGTATGTTGGATGCTTATTTTTCAGAACTTATTG < 41bp 1 0.300992995647835 1 0.0489822030067444 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097160 chr5:110097168 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_16617 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr20 3520912 3520912 1 + G A BLCA 3520926 + 3520906 3520946 41 GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGATGG GCTACAAAGTGTAGTTGGGACCATTTATATGTTTATGATGG < 41bp 1 0.0240011030503435 1 0.117464601993561 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3520926 chr20:3520912 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_16618 0 0 2 LIN28B POSTAR2 ENCODE chr20:3520898-3520942
64251 chr16 70162999 70162999 1 + C T BLCA 70163015 + 70162995 70163035 41 CTTGCCCTGGCAAGTGCTGCCTCCCAAAATGGTGAGCAGGT CTTGTCCTGGCAAGTGCTGCCTCCCAAAATGGTGAGCAGGT < 41bp 1 0.17940292812741 1 0.269136428833008 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDPR ENSG00000090857 CDS Human protein_coding chr16:70163015 chr16:70162999 nonsynonymous SNV 0.997 3 5 hm5C_associated_SNPs_16619 0 0 1 DDX24 POSTAR2 ENCODE chr16:70162906-70162999
64251 chr1 76255006 76255006 1 + G C BLCA 76255012 + 76254992 76255032 41 CTAGTATCGGACATGATCCTCATCTTTTATACACTCTTAGT CTAGTATCGGACATCATCCTCATCTTTTATACACTCTTAGT < 41bp 1 0.247969349894415 1 0.0455408692359924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255012 chr1:76255006 nonsynonymous SNV 0.991 4 15 hm5C_associated_SNPs_16620 0 0 48 TARDBP POSTAR2 DRA001158,DRS012386 chr1:76254832-76255015
64251 chr16 30750651 30750651 1 + C T BLCA 30750662 + 30750642 30750682 41 TGGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACA TGGACTTAGTAGATAGCGGGCCAGGCGGGTTGGAATTGACA < 41bp 1 0.191999118352903 1 0.218964219093323 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750662 chr16:30750651 nonsynonymous SNV 0.993 2 10 hm5C_associated_SNPs_16621 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr16 30750651 30750651 1 + C T BLCA 30750663 + 30750643 30750683 41 GGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACAC GGACTTAGTAGATAGCGGGCCAGGCGGGTTGGAATTGACAC < 41bp 1 0.372745362177394 1 0.428831696510315 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750663 chr16:30750651 nonsynonymous SNV 0.993 2 9 hm5C_associated_SNPs_16622 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr17 35310557 35310557 1 + G A BLCA 35310538 + 35310518 35310558 41 GATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTCTGA GATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTCTAA < 41bp 1 0.75078850947954 1 0.902595162391663 experiment 0.498422981040921 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AATF ENSG00000108270 CDS Human other chr17:35310538 chr17:35310557 nonsynonymous SNV 0.977 1 40 hm5C_associated_SNPs_16623 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr17:35310500-35310568
64251 chr2 153504334 153504334 1 + G A BLCA 153504343 + 153504323 153504363 41 ACCATACAGACGAGCCGATGCGGTGAGGAGAAGCGTCAGGC ACCATACAGACAAGCCGATGCGGTGAGGAGAAGCGTCAGGC < 41bp 1 0.379424838674575 1 0.443135619163513 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153504343 chr2:153504334 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_16624 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr2:153504320-153504340
64251 chr15 100215643 100215643 1 + G C BLCA 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC CACTACAGACCTCACAGTGCCAAATGCAGCTGGAAGCAGTC < 41bp 1 0.285468328175961 1 0.431822955608368 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215643 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_16626 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr15:100215624-100215648
64251 chr1 230384989 230384989 1 + C T BLCA 230384969 + 230384949 230384989 41 ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCC ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCT < 41bp 1 0.475208474085747 1 0.125806212425232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384969 chr1:230384989 nonsynonymous SNV 0.977 4 41 hm5C_associated_SNPs_16627 0 0 2 DDX24 POSTAR2 ENCODE chr1:230384960-230385009
64251 chr1 230384989 230384989 1 + C T BLCA 230384971 + 230384951 230384991 41 TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCCGG TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCTGG < 41bp 1 0.256661757077664 1 0.0787017345428467 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384971 chr1:230384989 nonsynonymous SNV 0.977 4 39 hm5C_associated_SNPs_16628 0 0 2 DDX24 POSTAR2 ENCODE chr1:230384960-230385009
64251 chr5 21497235 21497235 1 + C T BLCA 21497215 + 21497195 21497235 41 TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAC TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAT < 41bp 1 0.247598745914692 1 0.756800353527069 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21497215 chr5:21497235 . . 0 41 hm5C_associated_SNPs_16632 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:21497224-21497246
64251 chr12 57485694 57485694 1 + G A BLCA 57485709 + 57485689 57485729 41 AGCCAGAAGGAAGAGGAGATCCGCAAATACAGCATCATCTA AGCCAAAAGGAAGAGGAGATCCGCAAATACAGCATCATCTA < 41bp 1 0.613142673392341 1 0.156465739011765 experiment 0.773714653215317 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485709 chr12:57485694 synonymous SNV . 0 6 hm5C_associated_SNPs_16633 0 0 1 GRWD1 POSTAR2 ENCODE chr12:57485669-57485743
64251 chr12 57919824 57919824 1 + C T BLCA 57919804 + 57919784 57919824 41 AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATT < 41bp 1 0.431300284010869 1 0.0815805196762085 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919804 chr12:57919824 nonsynonymous SNV 0.940 0 41 hm5C_associated_SNPs_16634 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919806 + 57919786 57919826 41 GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCAC GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATTAC < 41bp 1 0.611377810538104 1 0.675271272659302 experiment 0.777244378923791 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919806 chr12:57919824 nonsynonymous SNV 0.940 0 39 hm5C_associated_SNPs_16635 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919809 + 57919789 57919829 41 CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTC CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATTACTTC < 41bp 1 0.0727186200541786 1 0.108228921890259 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919809 chr12:57919824 nonsynonymous SNV 0.940 0 36 hm5C_associated_SNPs_16636 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919812 + 57919792 57919832 41 TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTC TGCCCAGGCACCCTCAGCTTCCCACTCCTCATTACTTCGTC < 41bp 1 0.0736134840459091 1 0.0405671000480652 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919812 chr12:57919824 nonsynonymous SNV 0.940 0 33 hm5C_associated_SNPs_16637 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919813 + 57919793 57919833 41 GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCC GCCCAGGCACCCTCAGCTTCCCACTCCTCATTACTTCGTCC < 41bp 1 0.0957809283112676 1 0.048372745513916 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919813 chr12:57919824 nonsynonymous SNV 0.940 0 32 hm5C_associated_SNPs_16638 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919814 + 57919794 57919834 41 CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCC CCCAGGCACCCTCAGCTTCCCACTCCTCATTACTTCGTCCC < 41bp 1 0.130326870337038 1 0.0680664777755737 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919814 chr12:57919824 nonsynonymous SNV 0.940 0 31 hm5C_associated_SNPs_16639 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr12 57919824 57919824 1 + C T BLCA 57919816 + 57919796 57919836 41 CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCCTC CAGGCACCCTCAGCTTCCCACTCCTCATTACTTCGTCCCTC < 41bp 1 0.297776953129402 1 0.433526873588562 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919816 chr12:57919824 nonsynonymous SNV 0.940 0 29 hm5C_associated_SNPs_16640 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57919808-57919825
64251 chr6 31868798 31868798 1 - G A BLCA 31868814 - 31868794 31868834 41 CTTGCTCCTCTCCTGCTACACGGGCGCCTTGGAATTCGCTG CTTGCTCCTCTCCTGCTACACGGGCGCCTTGGAATTTGCTG < 41bp 1 0.433702544555193 1 0.639528393745422 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZBTB12 ENSG00000204366 CDS Human protein_coding chr6:31868814 chr6:31868798 synonymous SNV . 0 37 hm5C_associated_SNPs_16642 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:31868753-31868802
64251 chr12 22778190 22778190 1 + C T BLCA 22778183 + 22778163 22778203 41 CAGTTCAGCTGCTGTCCAGACCCGGATCGGCAACAGTGCCG CAGTTCAGCTGCTGTCCAGACCCGGATTGGCAACAGTGCCG < 41bp 1 0.794117160689027 1 0.199235945940018 experiment 0.411765678621947 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22778183 chr12:22778190 synonymous SNV . 0 28 hm5C_associated_SNPs_16643 0 0 6 DDX3X POSTAR2 ENCODE chr12:22778136-22778226
64251 chr6 41754506 41754506 1 + C T BLCA 41754513 + 41754493 41754533 41 GGAACAGGGGAGACTGGACTCGACCGAACTGAAGGAAGGGA GGAACAGGGGAGATTGGACTCGACCGAACTGAAGGAAGGGA < 41bp 1 0.40793665744965 1 0.205359399318695 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41754513 chr6:41754506 nonsynonymous SNV 0.001 1 14 hm5C_associated_SNPs_16644 0 0 2 DDX3X POSTAR2 ENCODE chr6:41754436-41754519
64251 chr16 30964944 30964944 1 + G C BLCA 30964942 + 30964922 30964962 41 GTCTGCAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCC GTCTGCAGCACCGTCCCAAGCTCAGCCAGCCTGCCCACCCC < 41bp 1 0.791863938378683 1 0.0670127868652344 experiment 0.416272123242634 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964942 chr16:30964944 nonsynonymous SNV 0.042 0 23 hm5C_associated_SNPs_16645 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr16 30964944 30964944 1 + G C BLCA 30964947 + 30964927 30964967 41 CAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA CAGCACCGTCCCAAGCTCAGCCAGCCTGCCCACCCCGGCAA < 41bp 1 0.3100429965226 1 0.14374053478241 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964947 chr16:30964944 nonsynonymous SNV 0.042 0 18 hm5C_associated_SNPs_16646 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr16 57241994 57241994 1 + G A BLCA 57241985 + 57241965 57242005 41 TCCAGTGATCAGGAACCTCCCTATTCAATGATAACATTACA TCCAGTGATCAGGAACCTCCCTATTCAATAATAACATTACA < 41bp 1 0.09792840275736 1 0.0977031588554382 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57241985 chr16:57241994 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_16654 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:57241976-57242007
64251 chr2 48027760 48027760 1 + G T BLCA 48027758 + 48027738 48027778 41 AGGGATCATGGAAGAAGTTGCTGATGGTTTTAAGTCTAAAA AGGGATCATGGAAGAAGTTGCTTATGGTTTTAAGTCTAAAA < 41bp 1 0.0850171334945871 1 0.0384313762187958 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48027758 chr2:48027760 nonsynonymous SNV 0.026 3 23 hm5C_associated_SNPs_16656 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027684-48027770
64251 chr9 131356542 131356542 1 + G T BLCA 131356537 + 131356517 131356557 41 GTTTATGTTGTTCCGTGAAGCGAATGAACTACAGCAATGGA GTTTATGTTGTTCCGTGAAGCGAATTAACTACAGCAATGGA < 41bp 1 0.104994390135335 1 0.284831881523132 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131356537 chr9:131356542 stopgain 0.312 1 26 hm5C_associated_SNPs_16658 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:131356520-131356547
64251 chr3 12571305 12571305 1 + C G BLCA 12571319 + 12571299 12571339 41 AAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCT AAGGCTGTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCT < 41bp 1 0.72861537556731 1 0.839203476905823 experiment 0.542769248865381 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12571319 chr3:12571305 nonsynonymous SNV 0.994 0 7 hm5C_associated_SNPs_16659 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:12571299-12571319
64251 chr6 36569547 36569547 1 + C G BLCA 36569553 + 36569533 36569573 41 AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGGT AAATCACAAGCCGTGCCGATCCTTCTCTAGGTCTCGTAGGT < 41bp 1 0.0240079798589889 1 0.039482057094574 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36569553 chr6:36569547 nonsynonymous SNV 0.998 3 15 hm5C_associated_SNPs_16661 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36569539-36569575
64251 chr22 42262990 42262990 1 + G A BLCA 42263002 + 42262982 42263022 41 GCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGTCATTC GCAGCAGCAGAGCTGTGGACCCTTCAGTGCAACGGTCATTC < 41bp 1 0.0180808810782057 1 0.0241656303405762 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42263002 chr22:42262990 nonsynonymous SNV 0.010 0 9 hm5C_associated_SNPs_16662 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:42262968-42263004
64251 chr17 28961033 28961033 1 + T G BLCA 28961053 + 28961033 28961073 41 TATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGAC GATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGAC < 41bp 1 0.0732580662931991 1 0.0998230576515198 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961053 chr17:28961033 . . 0 1 hm5C_associated_SNPs_16663 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:28961023-28961046
64251 chr12 14577561 14577561 1 + G A BLCA 14577553 + 14577533 14577573 41 TATAGCCTCTAGTGAAATAACTTCTGTTGATCTGGCTTCTG TATAGCCTCTAGTGAAATAACTTCTGTTAATCTGGCTTCTG < 41bp 1 0.471428749239629 1 0.0711080133914948 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577553 chr12:14577561 nonsynonymous SNV 0.049 0 29 hm5C_associated_SNPs_16664 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14577499-14577583
64251 chr12 14577561 14577561 1 + G A BLCA 14577556 + 14577536 14577576 41 AGCCTCTAGTGAAATAACTTCTGTTGATCTGGCTTCTGGAG AGCCTCTAGTGAAATAACTTCTGTTAATCTGGCTTCTGGAG < 41bp 1 0.26898529128402 1 0.222100347280502 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577556 chr12:14577561 nonsynonymous SNV 0.049 0 26 hm5C_associated_SNPs_16665 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14577499-14577583
64251 chr12 14577561 14577561 1 + G A BLCA 14577568 + 14577548 14577588 41 AATAACTTCTGTTGATCTGGCTTCTGGAGCACCAGCTTCCA AATAACTTCTGTTAATCTGGCTTCTGGAGCACCAGCTTCCA < 41bp 1 0.271524218783548 1 0.0359381437301636 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577568 chr12:14577561 nonsynonymous SNV 0.049 0 14 hm5C_associated_SNPs_16666 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14577499-14577583
64251 chr1 39853307 39853307 1 + C G BLCA 39853302 + 39853282 39853322 41 AAGCTAAGATGTCTGAGTTGCGAGTCACTCTGGATCCAGTG AAGCTAAGATGTCTGAGTTGCGAGTGACTCTGGATCCAGTG < 41bp 1 0.168419085954871 1 0.520346701145172 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39853302 chr1:39853307 synonymous SNV . 0 26 hm5C_associated_SNPs_16667 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39853286-39853318
64251 chr4 74308023 74308023 1 + G A BLCA 74308041 + 74308021 74308061 41 ATGAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACA ATAAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACA < 41bp 1 0.066877108953201 1 0.0767460763454437 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AFP ENSG00000081051 CDS Human protein_coding chr4:74308041 chr4:74308023 nonsynonymous SNV 0.325 3 3 hm5C_associated_SNPs_16668 0 0 5 IGF2BP3 POSTAR2 ENCODE chr4:74308023-74308086
64251 chr19 11553282 11553282 1 + G C BLCA 11553280 + 11553260 11553300 41 GCGGACAGTGAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGG GCGGACAGTGAAGGAGGAAGCTCAGAAGCCAGAGAGAGAGG < 41bp 1 0.670252940620183 1 0.338702499866486 experiment 0.659494118759635 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553280 chr19:11553282 nonsynonymous SNV 0.906 3 23 hm5C_associated_SNPs_16669 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11553282 11553282 1 + G C BLCA 11553288 + 11553268 11553308 41 TGAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGGCCAAAGAG TGAAGGAGGAAGCTCAGAAGCCAGAGAGAGAGGCCAAAGAG < 41bp 1 0.77726665306709 1 0.265318870544434 experiment 0.445466693865821 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553288 chr19:11553282 nonsynonymous SNV 0.906 3 15 hm5C_associated_SNPs_16670 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11553282 11553282 1 + G C BLCA 11553289 + 11553269 11553309 41 GAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGGCCAAAGAGC GAAGGAGGAAGCTCAGAAGCCAGAGAGAGAGGCCAAAGAGC < 41bp 1 0.60575463744939 1 0.729320526123047 experiment 0.78849072510122 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553289 chr19:11553282 nonsynonymous SNV 0.906 3 14 hm5C_associated_SNPs_16671 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr19 11553282 11553282 1 + G C BLCA 11553302 + 11553282 11553322 41 GAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAAGCT CAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAAGCT < 41bp 1 0.310835704825387 1 0.518966674804688 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553302 chr19:11553282 nonsynonymous SNV 0.906 3 1 hm5C_associated_SNPs_16672 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11553253-11553284
64251 chr6 168352584 168352584 1 + G A BLCA 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA TCCTCGGGGGACAATCTGTCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.143363555217043 1 0.323737382888794 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352584 nonsynonymous SNV 0.168 4 14 hm5C_associated_SNPs_16673 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:168352549-168352584
64251 chr6 168352584 168352584 1 + G A BLCA 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTCGGGGGACAATCTGTCCCCCGACCCGTGGAAGCGGGAC < 41bp 1 0.45333222351428 1 0.379425168037415 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352584 nonsynonymous SNV 0.168 4 13 hm5C_associated_SNPs_16674 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:168352549-168352584
64251 chr6 168352584 168352584 1 + G A BLCA 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTCGGGGGACAATCTGTCCCCCGACCCGTGGAAGCGGGACG < 41bp 1 0.0579233542476274 1 0.273851901292801 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352584 nonsynonymous SNV 0.168 4 12 hm5C_associated_SNPs_16675 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:168352549-168352584
64251 chr7 101821761 101821761 1 + G A BLCA 101821775 + 101821755 101821795 41 GCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT GCCATAAAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT < 41bp 1 0.51366993424361 1 0.851739645004272 experiment 0.97266013151278 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101821775 chr7:101821761 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_16676 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:101821753-101821786
64251 chr13 100634397 100634397 1 + G A BLCA 100634413 + 100634393 100634433 41 CGCGGCGGCGGCGGCGGCTGCCGCCGAGATGCAGGACCGTG CGCGACGGCGGCGGCGGCTGCCGCCGAGATGCAGGACCGTG < 41bp 1 0.361692643085253 1 0.20719176530838 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634413 chr13:100634397 nonsynonymous SNV 0.245 3 5 hm5C_associated_SNPs_16678 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:100634374-100634397
64251 chr3 9976525 9976525 1 + G C BLCA 9976545 + 9976525 9976565 41 GAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGC CAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGC < 41bp 1 0.096015763027671 1 0.105728387832642 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976545 chr3:9976525 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_16679 0 0 1 BUD13 POSTAR2 ENCODE chr3:9976517-9976558
64251 chr1 242052811 242052811 1 + T G BLCA 242052812 + 242052792 242052832 41 AAGAAACCCCTGTCCCCAGTCAGAGATAACATCCAACTAAC AAGAAACCCCTGTCCCCAGGCAGAGATAACATCCAACTAAC < 41bp 1 0.593572513612806 1 0.810050308704376 experiment 0.812854972774389 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242052812 chr1:242052811 nonsynonymous SNV 0.996 3 20 hm5C_associated_SNPs_16680 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:242052787-242052889
64251 chr11 130005576 130005576 1 + C T BLCA 130005561 + 130005541 130005581 41 TCTGAGGAGAGTGAGGAGATCCCACCGTTCCACCCCTTCCA TCTGAGGAGAGTGAGGAGATCCCACCGTTCCACCCTTTCCA < 41bp 1 0.235934429163218 1 0.0572077333927155 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130005561 chr11:130005576 synonymous SNV . 0 36 hm5C_associated_SNPs_16682 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr11:130005544-130005583
64251 chr6 30887966 30887966 1 + G T BLCA 30887972 + 30887952 30887992 41 GAGGATGGGACCATGACCTCCCTCTGCGGGGACTGGCTGCA GAGGATGGGACCATTACCTCCCTCTGCGGGGACTGGCTGCA < 41bp 1 0.114263954923039 1 0.281872510910034 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30887972 chr6:30887966 nonsynonymous SNV 0.994 1 15 hm5C_associated_SNPs_16684 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:30887944-30887974
64251 chr19 40882643 40882643 1 + G T BLCA 40882624 + 40882604 40882644 41 TCGGAGCCATCCATGCGGGCCTTCCTGCTCTCTCTGGCTGC TCGGAGCCATCCATGCGGGCCTTCCTGCTCTCTCTGGCTTC < 41bp 1 0.0967530052297918 1 0.017210066318512 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40882624 chr19:40882643 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_16685 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:40882630-40882672
64251 chr1 9324150 9324150 1 + G T BLCA 9324137 + 9324117 9324157 41 TTTCCCAGCAGCAGCCGGAGCAGCTGGTGCCAGGGCCAGGG TTTCCCAGCAGCAGCCGGAGCAGCTGGTGCCAGTGCCAGGG < 41bp 1 0.449879002813369 1 0.471386849880219 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control H6PD ENSG00000049239 CDS Human protein_coding chr1:9324137 chr1:9324150 nonsynonymous SNV 0.044 1 34 hm5C_associated_SNPs_16686 0 0 1 METAP2 POSTAR2 ENCODE chr1:9324113-9324161
64251 chr3 38022299 38022299 1 + G C BLCA 38022310 + 38022290 38022330 41 CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAG CCCTTCTTTCAGGGCCTGAGCCGGGAGGACGACGTGTACAG < 41bp 1 0.74376426125696 1 0.707260489463806 experiment 0.512471477486079 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022310 chr3:38022299 nonsynonymous SNV 0.999 4 10 hm5C_associated_SNPs_16688 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022293-38022327
64251 chr11 125482969 125482969 1 + C G BLCA 125482974 + 125482954 125482994 41 CCAGTGAGGCCTACTCTTCTCCGTCCATTGTACTATCTGCC CCAGTGAGGCCTACTGTTCTCCGTCCATTGTACTATCTGCC < 41bp 1 0.0994828633436378 1 0.612975895404816 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125482974 chr11:125482969 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_16689 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:125482942-125482992
64251 chr14 50247423 50247423 1 + G T BLCA 50247443 + 50247423 50247463 41 GATGCCTGGACTTACTGCATCAGTAAAAATGAATGGATACA TATGCCTGGACTTACTGCATCAGTAAAAATGAATGGATACA < 41bp 1 0.274383268061984 1 0.303805619478226 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50247443 chr14:50247423 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_16690 0 0 3 GRWD1 POSTAR2 ENCODE chr14:50247419-50247494
64251 chr17 80529635 80529635 1 + G C BLCA 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CGCCTTACTCCTACGCGCAGCTCATAGTTCAGGCGATTACG < 41bp 1 0.0696033506982409 1 0.0411477088928223 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529635 synonymous SNV . 0 23 hm5C_associated_SNPs_16691 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80529607-80529639
64251 chr16 89977038 89977038 1 + C T BLCA 89977054 + 89977034 89977074 41 TCTTCTTCCGGTCACTGTTGCCAAACTATACCATGGAGGTA TCTTTTTCCGGTCACTGTTGCCAAACTATACCATGGAGGTA < 41bp 1 0.273061838884944 1 0.180702328681946 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89977054 chr16:89977038 nonsynonymous SNV 0.406 1 5 hm5C_associated_SNPs_16692 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89977006-89977040
64251 chrX 70517696 70517696 1 + G C BLCA 70517707 + 70517687 70517727 41 CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG CAGGAGGAACAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG < 41bp 1 0.208057384706711 1 0.347572326660156 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517707 chrX:70517696 nonsynonymous SNV 0.999 3 10 hm5C_associated_SNPs_16693 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70517674-70517712
64251 chr22 40697304 40697304 1 + C G BLCA 40697295 + 40697275 40697315 41 ACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGG ACGCATTGAATGTGGGGCTCCCAGACCTTGAAACCAAAGGG < 41bp 1 0.179650241876741 1 0.461465418338776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40697295 chr22:40697304 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_16694 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:40697278-40697304
64251 chr7 21934407 21934407 1 + T C BLCA 21934397 + 21934377 21934417 41 TTCGGGAAATACGTATATCACTTGAACAACTGGACCTTAGT TTCGGGAAATACGTATATCACTTGAACAACCGGACCTTAGT < 41bp 1 0.254743769896056 1 0.479752063751221 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21934397 chr7:21934407 nonsynonymous SNV 0.905 4 31 hm5C_associated_SNPs_16695 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:21934389-21934415
64251 chrX 70517719 70517719 1 + G A BLCA 70517707 + 70517687 70517727 41 CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAAATGCGGCG < 41bp 1 0.221976992047122 1 0.470190018415451 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517707 chrX:70517719 synonymous SNV . 0 33 hm5C_associated_SNPs_16696 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221664 chrX:70517700-70517720
64251 chr17 61907789 61907789 1 + G C BLCA 61907774 + 61907754 61907794 41 GAGATGATTGGTGGACTGGACAAACAGATCAAGGAGATCAA GAGATGATTGGTGGACTGGACAAACAGATCAAGGACATCAA < 41bp 1 0.265355139205506 1 0.419875860214233 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907774 chr17:61907789 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_16697 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61907641-61907850
64251 chr17 61907789 61907789 1 + G C BLCA 61907778 + 61907758 61907798 41 TGATTGGTGGACTGGACAAACAGATCAAGGAGATCAAAGAA TGATTGGTGGACTGGACAAACAGATCAAGGACATCAAAGAA < 41bp 1 0.574539482584378 1 0.476048141717911 experiment 0.850921034831244 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907778 chr17:61907789 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_16698 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61907641-61907850
64251 chr10 116603614 116603614 1 + G C BLCA 116603627 + 116603607 116603647 41 ACTGACAGACAGACTTGCCTCCCTGTACAAGGCCCTACCTC ACTGACACACAGACTTGCCTCCCTGTACAAGGCCCTACCTC < 41bp 1 0.375043649998485 1 0.443759143352509 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116603627 chr10:116603614 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_16699 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:116603583-116603626
64251 chr11 57427173 57427173 1 + G C BLCA 57427163 + 57427143 57427183 41 TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCA TTTCACTTGGCATGGCTGTTCTGTGCAACTCAGCGGCCGCA < 41bp 1 0.615096713839418 1 0.316020756959915 experiment 0.769806572321164 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427163 chr11:57427173 synonymous SNV . 0 31 hm5C_associated_SNPs_16700 0 0 1 RBM15 POSTAR2 ENCODE chr11:57427145-57427202
64251 chr19 17836875 17836875 1 + G T BLCA 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTCGAGCTGCTGTAGCCCCCGACCTCCGGGGGCTTCCT < 41bp 1 0.508896092734078 1 0.352303177118301 experiment 0.982207814531845 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836875 stopgain 0.107 1 16 hm5C_associated_SNPs_16701 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836875 17836875 1 + G T BLCA 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTCGAGCTGCTGTAGCCCCCGACCTCCGGGGGCTTCCTCA < 41bp 1 0.329243389783131 1 0.430772483348846 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836875 stopgain 0.107 1 14 hm5C_associated_SNPs_16702 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 45535844 45535844 1 + C T BLCA 45535862 + 45535842 45535882 41 TTCTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT TTTTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT < 41bp 1 0.108592480133668 1 0.126727908849716 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RELB ENSG00000104856 CDS Human protein_coding chr19:45535862 chr19:45535844 synonymous SNV . 0 3 hm5C_associated_SNPs_16703 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45535839-45535859
64251 chr5 112901666 112901666 1 + A G BLCA 112901679 + 112901659 112901699 41 ACTATGGAAATAATCATAGGCATGAGAACACAGTTGCTTGG ACTATGGGAATAATCATAGGCATGAGAACACAGTTGCTTGG < 41bp 1 0.57234983515857 1 0.492031872272491 experiment 0.855300329682859 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112901679 chr5:112901666 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_16704 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr5:112901660-112901680
64251 chr6 87865442 87865442 1 + G T BLCA 87865437 + 87865417 87865457 41 GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACT GCGGGAGAGCCGGGTACCGGCCGTGTAAGCGGCCACCGACT < 41bp 1 0.419716795302305 1 0.246264725923538 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87865437 chr6:87865442 stopgain 0.785 1 26 hm5C_associated_SNPs_16705 0 0 8 DDX24 POSTAR2 ENCODE chr6:87865373-87865482
64251 chr2 101622476 101622476 1 + G A BLCA 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAAATTCA < 41bp 1 0.702033859045271 1 0.416465818881989 experiment 0.595932281909457 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622476 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_16706 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:101622418-101622477
64251 chr11 65268182 65268182 1 + G C BLCA 65268168 + 65268148 65268188 41 ACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTA ACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGCATCCTA < 41bp 1 0.687201479739858 1 0.253857165575027 experiment 0.625597040520285 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268168 chr11:65268182 . . 0 35 hm5C_associated_SNPs_16707 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268182 65268182 1 + G C BLCA 65268175 + 65268155 65268195 41 GGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGC GGAGGCGAGCAGGCGTTGTGCGTAGAGCATCCTAGACCAGC < 41bp 1 0.540301081617169 1 0.354000568389893 experiment 0.919397836765661 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268175 chr11:65268182 . . 0 28 hm5C_associated_SNPs_16708 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268182 65268182 1 + G C BLCA 65268185 + 65268165 65268205 41 AGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGT AGGCGTTGTGCGTAGAGCATCCTAGACCAGCATGCCAGTGT < 41bp 1 0.229073653116915 1 0.24809518456459 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268185 chr11:65268182 . . 0 18 hm5C_associated_SNPs_16709 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268182 65268182 1 + G C BLCA 65268191 + 65268171 65268211 41 TGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAG TGTGCGTAGAGCATCCTAGACCAGCATGCCAGTGTGCCAAG < 41bp 1 0.485915896191273 1 0.0559116005897522 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268191 chr11:65268182 . . 0 12 hm5C_associated_SNPs_16710 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268182 65268182 1 + G C BLCA 65268195 + 65268175 65268215 41 CGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCA CGTAGAGCATCCTAGACCAGCATGCCAGTGTGCCAAGGCCA < 41bp 1 0.31340880513527 1 0.0296974778175354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268195 chr11:65268182 . . 0 8 hm5C_associated_SNPs_16711 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr2 101622467 101622467 1 + G A BLCA 101622449 + 101622429 101622469 41 CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAG CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATAAG < 41bp 1 0.175049092229626 1 0.397925406694412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622449 chr2:101622467 nonsynonymous SNV 0.997 0 39 hm5C_associated_SNPs_16712 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101622418-101622467
64251 chr2 101622467 101622467 1 + G A BLCA 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATAAGGATG < 41bp 1 0.714297567077911 1 0.7532958984375 experiment 0.571404865844179 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622467 nonsynonymous SNV 0.997 0 35 hm5C_associated_SNPs_16713 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101622418-101622467
64251 chr2 101622467 101622467 1 + G A BLCA 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATAAGGATGAAGATTCA < 41bp 1 0.710801332474947 1 0.435490131378174 experiment 0.578397335050105 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622467 nonsynonymous SNV 0.997 0 27 hm5C_associated_SNPs_16714 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101622418-101622467
64251 chr2 101622473 101622473 1 + G A BLCA 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATA < 41bp 1 0.73997160517753 1 0.621378183364868 experiment 0.520056789644941 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622473 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_16715 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:101622418-101622474
64251 chr2 101622473 101622473 1 + G A BLCA 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATGAGGATAAAGATTCA < 41bp 1 0.703928551859993 1 0.503063499927521 experiment 0.592142896280013 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622473 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_16716 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:101622418-101622474
64251 chr12 56536448 56536448 1 + C T BLCA 56536459 + 56536439 56536479 41 ACCAGAGCTCTCGGGGGGACCCCCTCACATCACCTCCTCAG ACCAGAGCTTTCGGGGGGACCCCCTCACATCACCTCCTCAG < 41bp 1 0.258114267651328 1 0.106501370668411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536459 chr12:56536448 synonymous SNV . 0 10 hm5C_associated_SNPs_16719 0 0 5 DDX55 POSTAR2 ENCODE chr12:56536427-56536519
64251 chr12 58114292 58114292 1 + C T BLCA 58114286 + 58114266 58114306 41 ACGAGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAG ACGAGAAACCTCAAGGAGATCTTCTTTAATATCTTGGTAAG < 41bp 1 0.412910176890431 1 0.0927506387233734 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58114286 chr12:58114292 synonymous SNV . 0 27 hm5C_associated_SNPs_16720 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:58114270-58114296
64251 chr12 58114292 58114292 1 + C T BLCA 58114289 + 58114269 58114309 41 AGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAGAGG AGAAACCTCAAGGAGATCTTCTTTAATATCTTGGTAAGAGG < 41bp 1 0.354015883524091 1 0.404534071683884 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58114289 chr12:58114292 synonymous SNV . 0 24 hm5C_associated_SNPs_16721 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:58114270-58114296
64251 chr6 7581076 7581076 1 + G A BLCA 7581082 + 7581062 7581102 41 CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCCA CAGGAGAGGACTGTAAAGGACCAGGATATCACGCGGTTCCA < 41bp 1 0.348838561966001 1 0.165549099445343 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581082 chr6:7581076 synonymous SNV . 0 15 hm5C_associated_SNPs_16722 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr6:7581050-7581076
64251 chr6 7581076 7581076 1 + G A BLCA 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TAAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA < 41bp 1 0.149733543762164 1 0.401942193508148 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581076 synonymous SNV . 0 2 hm5C_associated_SNPs_16723 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr6:7581050-7581076
64251 chr20 57480468 57480468 1 + G C BLCA 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA CAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA < 41bp 1 0.463132447104217 1 0.370701938867569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480468 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_16724 0 0 36 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:57480438-57480474
64251 chrX 106893251 106893251 1 + G T BLCA 106893248 + 106893228 106893268 41 CCGTTTCTTACCTATTCAGCCATGTCCCTTTATAATAGAGT CCGTTTCTTACCTATTCAGCCATTTCCCTTTATAATAGAGT < 41bp 1 0.0117776364440166 1 0.0528335571289062 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893248 chrX:106893251 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_16726 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 106893251 106893251 1 + G T BLCA 106893253 + 106893233 106893273 41 TCTTACCTATTCAGCCATGTCCCTTTATAATAGAGTAACTT TCTTACCTATTCAGCCATTTCCCTTTATAATAGAGTAACTT < 41bp 1 0.0912619669387868 1 0.0837957262992859 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893253 chrX:106893251 nonsynonymous SNV 0.999 3 19 hm5C_associated_SNPs_16727 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 70787373 70787373 1 + T C BLCA 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGCGTACTC < 41bp 1 0.230390086538671 1 0.060493677854538 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787373 synonymous SNV . 0 35 hm5C_associated_SNPs_16728 0 0 26 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr11 67353675 67353675 1 + G T BLCA 67353680 + 67353660 67353700 41 AGACCTTCATTGTGGGAGACCAGGTGAGCATCTGGCCCCAT AGACCTTCATTGTGGTAGACCAGGTGAGCATCTGGCCCCAT < 41bp 1 0.689402559002214 1 0.61240017414093 experiment 0.621194881995571 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353680 chr11:67353675 nonsynonymous SNV 0.926 2 16 hm5C_associated_SNPs_16729 0 0 4 LARP4 POSTAR2 ENCODE chr11:67353672-67353680
64251 chr13 93879779 93879779 1 + G A BLCA 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCGCCGGGGCGAATGTGAAGGCTC < 41bp 1 0.571905645889669 1 0.838721394538879 experiment 0.856188708220661 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879779 nonsynonymous SNV 0.998 1 29 hm5C_associated_SNPs_16730 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr13:93879779-93879780
64251 chr1 878363 878363 1 + G A BLCA 878356 + 878336 878376 41 CAAGCTCCAGCTGGAGGGGCCGGCGCCGAGGGGAAGGGGCT CAAGCTCCAGCTGGAGGGGCCGGCGCCAAGGGGAAGGGGCT < 41bp 1 0.582414480605575 1 0.643600344657898 experiment 0.835171038788851 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:878356 chr1:878363 nonsynonymous SNV 0.540 1 28 hm5C_associated_SNPs_16731 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:878360-878380
64251 chr7 148921496 148921496 1 + C G BLCA 148921485 + 148921465 148921505 41 AGACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGG AGACCTACAGCCGTAAGGAGCACCTGCAGAAGCACCAGCGG < 41bp 1 0.349924650014743 1 0.238924562931061 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921485 chr7:148921496 nonsynonymous SNV 1.000 0 32 hm5C_associated_SNPs_16732 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921496 148921496 1 + C G BLCA 148921487 + 148921467 148921507 41 ACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCT ACCTACAGCCGTAAGGAGCACCTGCAGAAGCACCAGCGGCT < 41bp 1 0.0631208813558634 1 0.183176696300507 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921487 chr7:148921496 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_16733 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921496 148921496 1 + C G BLCA 148921488 + 148921468 148921508 41 CCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCTG CCTACAGCCGTAAGGAGCACCTGCAGAAGCACCAGCGGCTG < 41bp 1 0.757781085945154 1 0.75944185256958 experiment 0.484437828109693 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921488 chr7:148921496 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_16734 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr6 31516038 31516038 1 + C T BLCA 31516048 + 31516028 31516068 41 CCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGAT CCCAGGCCCTTCTCCAGCGACACCCAGGCCTCGATGTAGAT < 41bp 1 0.316557861637557 1 0.0310543775558472 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFKBIL1 ENSG00000204498;ENSG00000213760 CDS Human other chr6:31516048 chr6:31516038 nonsynonymous SNV 0.998 1 11 hm5C_associated_SNPs_16735 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:31516033-31516060
64251 chr18 56587297 56587297 1 + C T BLCA 56587286 + 56587266 56587306 41 GCTTTCAACAAGGTGCTGAGCAGTGTCAATCCAGTCCCTGT GCTTTCAACAAGGTGCTGAGCAGTGTCAATCTAGTCCCTGT < 41bp 1 0.449354774116965 1 0.0683876276016235 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF532 ENSG00000074657 CDS Human protein_coding chr18:56587286 chr18:56587297 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_16738 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:56587290-56587337
64251 chr21 47754527 47754527 1 + A G BLCA 47754537 + 47754517 47754557 41 GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATGT GTTCACAGTCGGTGACCACCCACCAGAACAGCGTGGGATGT < 41bp 1 0.677413202309958 1 0.42102986574173 experiment 0.645173595380083 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47754537 chr21:47754527 nonsynonymous SNV 0.006 0 11 hm5C_associated_SNPs_16739 1 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr21:47754526-47754527
64251 chr16 22335849 22335849 1 + T A BLCA 22335864 + 22335844 22335884 41 GGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAG GGACTACCTGGAGCACATGGCCGTGGTGAGGATCAACAAAG < 41bp 1 0.290847525216769 1 0.257175892591476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22335864 chr16:22335849 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_16740 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr16:22335841-22335861
64251 chr17 4799524 4799524 1 + G T BLCA 4799505 + 4799485 4799525 41 CAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGA CAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCTA < 41bp 1 0.106803864793952 1 0.070437878370285 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799505 chr17:4799524 nonsynonymous SNV 0.993 4 40 hm5C_associated_SNPs_16741 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4799510-4799541
64251 chr17 4799524 4799524 1 + G T BLCA 4799508 + 4799488 4799528 41 TCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGACCT TCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCTACCT < 41bp 1 0.134589526169609 1 0.225900620222092 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799508 chr17:4799524 nonsynonymous SNV 0.993 4 37 hm5C_associated_SNPs_16742 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4799510-4799541
64251 chr3 178917576 178917576 1 + G A BLCA 178917593 + 178917573 178917613 41 GCTGTGGATCTTAGGGACCTCAATTCACCTCATAGTAGAGC GCTATGGATCTTAGGGACCTCAATTCACCTCATAGTAGAGC < 41bp 1 0.14663197153207 1 0.26962423324585 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178917593 chr3:178917576 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_16743 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:178917552-178917578
64251 chr2 73476983 73476983 1 + C G BLCA 73476990 + 73476970 73477010 41 CAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTCGATGCC CAGTGTGAATGCTGTGTCAGCAGATGTGCTGGGTCGATGCC < 41bp 1 0.5928891236509 1 0.375213742256165 experiment 0.814221752698201 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476990 chr2:73476983 nonsynonymous SNV 0.999 2 14 hm5C_associated_SNPs_16745 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:73476917-73476983
64251 chr15 63354444 63354444 1 + G C BLCA 63354456 + 63354436 63354476 41 ATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAG ATGAGGAACAGATCAAGGTCCTTTCCGACAAGCTGAAGGAG < 41bp 1 0.0506826149606469 1 0.12857648730278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63354456 chr15:63354444 nonsynonymous SNV 0.996 3 9 hm5C_associated_SNPs_16746 0 0 11 GPKOW POSTAR2 ENCODE chr15:63354401-63354446
64251 chr5 109155380 109155380 1 + G C BLCA 109155379 + 109155359 109155399 41 ATCTTTTAAAGATCTCTTTTCGAGCACATATACCGCCATTG ATCTTTTAAAGATCTCTTTTCCAGCACATATACCGCCATTG < 41bp 1 0.0632735686964294 1 0.267178654670715 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109155379 chr5:109155380 nonsynonymous SNV 0.958 0 22 hm5C_associated_SNPs_16747 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221663 chr5:109155360-109155380
64251 chrX 48759277 48759277 1 + G C BLCA 48759267 + 48759247 48759287 41 TCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCAA TCCTGGCTCTCCCCACATGACCCCAACTCCCTGGTTACCAA < 41bp 1 0.706435831645746 1 0.0428555309772491 experiment 0.587128336708508 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759267 chrX:48759277 nonsynonymous SNV 0.747 1 31 hm5C_associated_SNPs_16748 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr17 27899299 27899299 1 + C G BLCA 27899317 + 27899297 27899337 41 CTCAGCCCTGAGGTTTCCCTCTGCTTCCCCAGGGAGCTTGA CTGAGCCCTGAGGTTTCCCTCTGCTTCCCCAGGGAGCTTGA < 41bp 1 0.442981889253164 1 0.17300346493721 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TP53I13 ENSG00000167543 CDS Human protein_coding chr17:27899317 chr17:27899299 stopgain 0.005 0 3 hm5C_associated_SNPs_16755 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr17:27899298-27899299
64251 chr12 52642505 52642505 1 + C G BLCA 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TGCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA < 41bp 1 0.73356672835268 1 0.853167653083801 experiment 0.53286654329464 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642505 nonsynonymous SNV 0.205 1 2 hm5C_associated_SNPs_16756 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr15 41192561 41192561 1 + C G BLCA 41192553 + 41192533 41192573 41 TGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGAGAAACC TGCAGGGCGACCCAGAGGCCCTGACTCTGTACCGAGAAACC < 41bp 1 0.118632213608584 1 0.0754374265670776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192553 chr15:41192561 synonymous SNV . 0 29 hm5C_associated_SNPs_16758 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:41192561-41192562
64251 chr17 71231891 71231891 1 + G C BLCA 71231897 + 71231877 71231917 41 CCAGAACAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGG CCAGAACAGACAGTCAAGACCTTTCCACTGCCAGCTGTTGG < 41bp 1 0.047033371938821 1 0.0259529650211334 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71231897 chr17:71231891 synonymous SNV . 0 15 hm5C_associated_SNPs_16759 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:71231891-71231913
64251 chr19 36124047 36124047 1 + G A BLCA 36124053 + 36124033 36124073 41 CTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCT CTCACCAGGCCCTCATGGGCCCCCCTCTGCCTGGGCCCCCT < 41bp 1 0.266870268490387 1 0.0687345564365387 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124053 chr19:36124047 nonsynonymous SNV 0.854 3 15 hm5C_associated_SNPs_16760 0 0 3 FMR1 POSTAR2 ENCODE chr19:36124033-36124075
64251 chr16 1559872 1559872 1 + G T BLCA 1559884 + 1559864 1559904 41 GGACGCTGGCACTGAGGGCCCTGCTGCTTCTGCAGAGACTC GGACGCTGTCACTGAGGGCCCTGCTGCTTCTGCAGAGACTC < 41bp 1 0.418102226961637 1 0.106472313404083 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1559884 chr16:1559872 nonsynonymous SNV 0.119 3 9 hm5C_associated_SNPs_16761 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:1559837-1559874
64251 chr15 69737226 69737226 1 + C T BLCA 69737220 + 69737200 69737240 41 CAGATGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTG CAGATGGGTAGATCATAAGCCCGCCTTTAACATGCAAACTG < 41bp 1 0.248619084748716 1 0.057417094707489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737220 chr15:69737226 nonsynonymous SNV 0.999 1 27 hm5C_associated_SNPs_16762 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:69737210-69737234
64251 chr15 69737226 69737226 1 + C T BLCA 69737224 + 69737204 69737244 41 TGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTGAAAC TGGGTAGATCATAAGCCCGCCTTTAACATGCAAACTGAAAC < 41bp 1 0.0905079875952112 1 0.0423241257667542 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737224 chr15:69737226 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_16763 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:69737210-69737234
64251 chr6 47577018 47577018 1 + G C BLCA 47577024 + 47577004 47577044 41 TGTTGTGCATTGTAGAAGCACTGAAAAAGGATCACGGGTAA TGTTGTGCATTGTACAAGCACTGAAAAAGGATCACGGGTAA < 41bp 1 0.68191520453543 1 0.402005523443222 experiment 0.63616959092914 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577024 chr6:47577018 nonsynonymous SNV 0.998 2 15 hm5C_associated_SNPs_16764 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr6 47577018 47577018 1 + G C BLCA 47577036 + 47577016 47577056 41 TAGAAGCACTGAAAAAGGATCACGGGTAAGTAGCCCTTCTT TACAAGCACTGAAAAAGGATCACGGGTAAGTAGCCCTTCTT < 41bp 1 0.717740328587789 1 0.863666117191315 experiment 0.564519342824422 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577036 chr6:47577018 nonsynonymous SNV 0.998 2 3 hm5C_associated_SNPs_16765 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr12 862795 862795 1 + G T BLCA 862789 + 862769 862809 41 CCGGTTCCCTGTTCCTCTCGCCGCCGGCTCCTGCCCCCAAG CCGGTTCCCTGTTCCTCTCGCCGCCGTCTCCTGCCCCCAAG < 41bp 1 0.200577111566451 1 0.198037505149841 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:862789 chr12:862795 nonsynonymous SNV 0.983 0 27 hm5C_associated_SNPs_16766 0 0 21 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:862728-862808
64251 chr1 156105709 156105709 1 + G A BLCA 156105689 + 156105669 156105709 41 CAAACCCTCCCACCCCCCTTCAGCTGGCAGCCAAGGAGGCG CAAACCCTCCCACCCCCCTTCAGCTGGCAGCCAAGGAGGCA < 41bp 1 0.162776418885243 1 0.394623577594757 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105689 chr1:156105709 synonymous SNV . 0 41 hm5C_associated_SNPs_16767 1 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:156105704-156105733
64251 chr1 156105709 156105709 1 + G A BLCA 156105721 + 156105701 156105741 41 AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCG AAGGAGGCAAAGCTTCGAGACCTGGAGGACTCACTGGCCCG < 41bp 1 0.310599239213209 1 0.34722051024437 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105721 chr1:156105709 synonymous SNV . 0 9 hm5C_associated_SNPs_16768 1 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:156105704-156105733
64251 chr11 117152353 117152353 1 + G A BLCA 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGAGGAACGAAGCCAAGCTGAGCAGCCT < 41bp 1 0.409203010888349 1 0.401753097772598 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152353 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_16770 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117152320-117152360
64251 chr17 7156274 7156274 1 + G C BLCA 7156261 + 7156241 7156281 41 GAGCAAGTGCATATCCTGGGCTGTGAAGTGAGCGAGGAAGA GAGCAAGTGCATATCCTGGGCTGTGAAGTGAGCCAGGAAGA < 41bp 1 0.287436275120083 1 0.0857960283756256 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ELP5 ENSG00000170291 CDS Human protein_coding chr17:7156261 chr17:7156274 nonsynonymous SNV 0.945 3 34 hm5C_associated_SNPs_16771 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7156240-7156280
64251 chr19 2249452 2249452 1 + G A BLCA 2249433 + 2249413 2249453 41 GAGGAGCCAGCTGTGGGCACCAGTGGCCTCATCTTCCGAGA GAGGAGCCAGCTGTGGGCACCAGTGGCCTCATCTTCCGAAA < 41bp 1 0.417074276158488 1 0.598136603832245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AMH ENSG00000104899 CDS Human protein_coding chr19:2249433 chr19:2249452 nonsynonymous SNV 0.001 1 40 hm5C_associated_SNPs_16773 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:2249412-2249467
64251 chr17 80676928 80676928 1 + G C BLCA 80676908 + 80676888 80676928 41 GGAGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTG GGAGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTC < 41bp 1 0.499812819027647 1 0.0639490485191345 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80676908 chr17:80676928 synonymous SNV . 0 41 hm5C_associated_SNPs_16774 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80676916-80676937
64251 chr17 80676928 80676928 1 + G C BLCA 80676910 + 80676890 80676930 41 AGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTGAG AGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTCAG < 41bp 1 0.647460977981775 1 0.256482243537903 experiment 0.705078044036451 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80676910 chr17:80676928 synonymous SNV . 0 39 hm5C_associated_SNPs_16775 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80676916-80676937
64251 chr12 56531979 56531979 1 + G C BLCA 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG CAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG < 41bp 1 0.0489172124743826 1 0.536650359630585 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56531979 nonsynonymous SNV 0.998 2 1 hm5C_associated_SNPs_16776 0 0 8 DDX24 POSTAR2 ENCODE chr12:56531966-56532026
64251 chr19 42373788 42373788 1 + C T BLCA 42373769 + 42373749 42373789 41 TGACCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTCA TGACCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTTA < 41bp 1 0.249318371754424 1 0.393706470727921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373769 chr19:42373788 stopgain 1.000 1 40 hm5C_associated_SNPs_16777 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr19 42373788 42373788 1 + C T BLCA 42373772 + 42373752 42373792 41 CCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTCAGGG CCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTTAGGG < 41bp 1 0.189920364883134 1 0.245908468961716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373772 chr19:42373788 stopgain 1.000 1 37 hm5C_associated_SNPs_16778 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr19 42373788 42373788 1 + C T BLCA 42373779 + 42373759 42373799 41 CTCCCCACAGCGGCCGCAAACTGACACCTCAGGGACAAAGA CTCCCCACAGCGGCCGCAAACTGACACCTTAGGGACAAAGA < 41bp 1 0.299013950887939 1 0.322599530220032 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373779 chr19:42373788 stopgain 1.000 1 30 hm5C_associated_SNPs_16779 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr19 42373788 42373788 1 + C T BLCA 42373785 + 42373765 42373805 41 ACAGCGGCCGCAAACTGACACCTCAGGGACAAAGAGATCTG ACAGCGGCCGCAAACTGACACCTTAGGGACAAAGAGATCTG < 41bp 1 0.141478190238317 1 0.0475406646728516 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373785 chr19:42373788 stopgain 1.000 1 24 hm5C_associated_SNPs_16780 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr19 42373788 42373788 1 + C T BLCA 42373794 + 42373774 42373814 41 GCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATC GCAAACTGACACCTTAGGGACAAAGAGATCTGGACAGAATC < 41bp 1 0.275675334070707 1 0.333170115947723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373794 chr19:42373788 stopgain 1.000 1 15 hm5C_associated_SNPs_16781 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr19 42373788 42373788 1 + C T BLCA 42373808 + 42373788 42373828 41 CAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTAAG TAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTAAG < 41bp 1 0.612051621551133 1 0.279759407043457 experiment 0.775896756897734 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373808 chr19:42373788 stopgain 1.000 1 1 hm5C_associated_SNPs_16782 0 0 79 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:42373760-42373800
64251 chr17 57918683 57918683 1 + G C BLCA 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGACTGTTGAATCTCATGGCAACACCAGTCCATGGGCTGT < 41bp 1 0.620985287883733 1 0.229179203510284 experiment 0.758029424232534 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918683 . . 0 32 hm5C_associated_SNPs_16783 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr17 57918683 57918683 1 + G C BLCA 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG ACTGTTGAATCTCATGGCAACACCAGTCCATGGGCTGTCTG < 41bp 1 0.760439243400792 1 0.212715536355972 experiment 0.479121513198415 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918683 . . 0 29 hm5C_associated_SNPs_16784 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr9 140136952 140136952 1 + G C BLCA 140136939 + 140136919 140136959 41 GACAAATGATTAGCTGTGTTCTCTCACAGGTCAGAGTGGTG GACAAATGATTAGCTGTGTTCTCTCACAGGTCACAGTGGTG < 41bp 1 0.211215483401261 1 0.105487614870071 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140136939 chr9:140136952 nonsynonymous SNV 0.986 1 34 hm5C_associated_SNPs_16785 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:140136940-140136960
64251 chr9 140136952 140136952 1 + G C BLCA 140136941 + 140136921 140136961 41 CAAATGATTAGCTGTGTTCTCTCACAGGTCAGAGTGGTGCT CAAATGATTAGCTGTGTTCTCTCACAGGTCACAGTGGTGCT < 41bp 1 0.362028670901961 1 0.169688105583191 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140136941 chr9:140136952 nonsynonymous SNV 0.986 1 32 hm5C_associated_SNPs_16786 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:140136940-140136960
64251 chr1 220964944 220964944 1 + C T BLCA 220964927 + 220964907 220964947 41 TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTAC TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCTTAC < 41bp 1 0.407884738552923 1 0.104949444532394 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964927 chr1:220964944 synonymous SNV . 0 38 hm5C_associated_SNPs_16787 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:220964942-220964961
64251 chr1 220964944 220964944 1 + C T BLCA 220964933 + 220964913 220964953 41 GCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACAAAG GCGATGGTGACACCCTGACTCTCAGTGCAGCTTACACAAAG < 41bp 1 0.752740198087403 1 0.369265079498291 experiment 0.494519603825194 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964933 chr1:220964944 synonymous SNV . 0 32 hm5C_associated_SNPs_16788 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:220964942-220964961
64251 chr2 9528444 9528444 1 + G A BLCA 9528446 + 9528426 9528466 41 AGTCCCAACCGGCGGGAAGACCGGCCCATCAGCTTCTACCA AGTCCCAACCGGCGGGAAAACCGGCCCATCAGCTTCTACCA < 41bp 1 0.510281816157412 1 0.451862007379532 experiment 0.979436367685176 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASAP2 ENSG00000151693 CDS Human protein_coding chr2:9528446 chr2:9528444 nonsynonymous SNV 0.990 0 19 hm5C_associated_SNPs_16789 0 0 2 GRWD1 POSTAR2 ENCODE chr2:9528422-9528500
64251 chr1 26158516 26158516 1 + G A BLCA 26158523 + 26158503 26158543 41 AGAAAAGGAAATTGACAACCCTCAGCTCTGCAAACTCAGTC AGAAAAGGAAATTAACAACCCTCAGCTCTGCAAACTCAGTC < 41bp 1 0.490510980560373 1 0.125117927789688 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26158523 chr1:26158516 synonymous SNV . 0 14 hm5C_associated_SNPs_16792 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr1:26158504-26158527
64251 chr5 179263587 179263587 1 + G A BLCA 179263583 + 179263563 179263603 41 CCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGC CCAGTATTCAAAGCATCCCCCGCCATTGTGACCACTTTTGC < 41bp 1 0.600727839916025 1 0.719185769557953 experiment 0.798544320167949 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179263583 chr5:179263587 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_16793 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179263560-179263600
64251 chr17 4859385 4859385 1 + C A BLCA 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCAGGCCGTTGAGAAGAAGGCCTGCAAATGTCTGCTGCTGA < 41bp 1 0.136669842101232 1 0.0846039354801178 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859385 nonsynonymous SNV 0.973 2 28 hm5C_associated_SNPs_16794 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859385 4859385 1 + C A BLCA 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CAGGCCGTTGAGAAGAAGGCCTGCAAATGTCTGCTGCTGAA < 41bp 1 0.769649941015654 1 0.106142818927765 experiment 0.460700117968692 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859385 nonsynonymous SNV 0.973 2 27 hm5C_associated_SNPs_16795 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859385 4859385 1 + C A BLCA 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCCGTTGAGAAGAAGGCCTGCAAATGTCTGCTGCTGAAGGT < 41bp 1 0.433432536147316 1 0.201324671506882 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859385 nonsynonymous SNV 0.973 2 24 hm5C_associated_SNPs_16796 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859385 4859385 1 + C A BLCA 4859389 + 4859369 4859409 41 AGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAG AGAAGAAGGCCTGCAAATGTCTGCTGCTGAAGGTCAACCAG < 41bp 1 0.796123636104156 1 0.398133546113968 experiment 0.407752727791689 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859389 chr17:4859385 nonsynonymous SNV 0.973 2 17 hm5C_associated_SNPs_16797 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859385 4859385 1 + C A BLCA 4859392 + 4859372 4859412 41 AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATC AGAAGGCCTGCAAATGTCTGCTGCTGAAGGTCAACCAGATC < 41bp 1 0.380196841518047 1 0.122078061103821 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859392 chr17:4859385 nonsynonymous SNV 0.973 2 14 hm5C_associated_SNPs_16798 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859385 4859385 1 + C A BLCA 4859403 + 4859383 4859423 41 AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC AAATGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC < 41bp 1 0.400706873601246 1 0.22324326634407 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859403 chr17:4859385 nonsynonymous SNV 0.973 2 3 hm5C_associated_SNPs_16799 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr6 161470185 161470185 1 + T C BLCA 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATACTATTAATGAAATCCTTACTTTCAAAGTCGACTAT < 41bp 1 0.0723970627460784 1 0.0492531657218933 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470185 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_16800 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:161470180-161470200
64251 chr19 10789861 10789861 1 + G A BLCA 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTCGCGTGCCCACCTGGGGTCCCCTCCAAGGCTGGGTAAGG < 41bp 1 0.0768887030030459 1 0.0741359889507294 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789861 nonsynonymous SNV 0.996 3 28 hm5C_associated_SNPs_16802 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10789832-10789861
64251 chr19 10789861 10789861 1 + G A BLCA 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TCGCGTGCCCACCTGGGGTCCCCTCCAAGGCTGGGTAAGGC < 41bp 1 0.036576578329758 1 0.160623967647552 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789861 nonsynonymous SNV 0.996 3 27 hm5C_associated_SNPs_16803 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10789832-10789861
64251 chr11 117152348 117152348 1 + G T BLCA 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGAGTAACGGAGCCAAGCTGAGCAGCCT < 41bp 1 0.664667946429689 1 0.670540988445282 experiment 0.670664107140623 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152348 nonsynonymous SNV 0.992 3 18 hm5C_associated_SNPs_16804 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117152320-117152360
64251 chr1 33237296 33237296 1 + C T BLCA 33237305 + 33237285 33237325 41 TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC TCCTCCAGCTCTGCCAGCCCCAGCTCCTGCTAGTTCCGCCC < 41bp 1 0.325419922011969 1 0.461450517177582 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237305 chr1:33237296 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_16807 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:33237295-33237296
64251 chr4 6642857 6642857 1 + G T BLCA 6642862 + 6642842 6642882 41 CCGGGCGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGA CCGGGCGACGCGGCCTAGGGCCGGGCGGCCAAGAGGTGCGA < 41bp 1 0.733682111845784 1 0.515137314796448 experiment 0.532635776308431 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642862 chr4:6642857 stopgain 0.002 0 16 hm5C_associated_SNPs_16809 0 0 5 RPS3 POSTAR2 ENCODE chr4:6642853-6642891
64251 chr4 6642857 6642857 1 + G T BLCA 6642867 + 6642847 6642887 41 CGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGG CGACGCGGCCTAGGGCCGGGCGGCCAAGAGGTGCGAGAAGG < 41bp 1 0.581256900649669 1 0.525231719017029 experiment 0.837486198700662 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642867 chr4:6642857 stopgain 0.002 0 11 hm5C_associated_SNPs_16810 0 0 5 RPS3 POSTAR2 ENCODE chr4:6642853-6642891
64251 chr4 6642857 6642857 1 + G T BLCA 6642870 + 6642850 6642890 41 CGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGGCCG CGCGGCCTAGGGCCGGGCGGCCAAGAGGTGCGAGAAGGCCG < 41bp 1 0.316155351338744 1 0.578642189502716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642870 chr4:6642857 stopgain 0.002 0 8 hm5C_associated_SNPs_16811 0 0 5 RPS3 POSTAR2 ENCODE chr4:6642853-6642891
64251 chr16 28970119 28970119 1 + G C BLCA 28970135 + 28970115 28970155 41 TGGAGAGACAGAGCTATCACCTACTGCCACTCCCAGGACCC TGGACAGACAGAGCTATCACCTACTGCCACTCCCAGGACCC < 41bp 1 0.453250974530526 1 0.032698005437851 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970135 chr16:28970119 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_16812 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:28970097-28970137
64251 chr10 115489207 115489207 1 + G C BLCA 115489196 + 115489176 115489216 41 CAGGGTGAATGACAGAGTTGCCAGGCACTTTGAGTCTCAGT CAGGGTGAATGACAGAGTTGCCAGGCACTTTCAGTCTCAGT < 41bp 1 0.280853064956167 1 0.1108618080616 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115489196 chr10:115489207 nonsynonymous SNV 0.995 3 32 hm5C_associated_SNPs_16813 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:115489190-115489228
64251 chr12 27908150 27908150 1 + G C BLCA 27908142 + 27908122 27908162 41 AGAATGGGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGT AGAATGGGAAAAAAGTAAGACTGAAGCACACATGGAAGAGT < 41bp 1 0.578468714311282 1 0.514430165290833 experiment 0.843062571377436 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908142 chr12:27908150 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_16814 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr12 27908150 27908150 1 + G C BLCA 27908148 + 27908128 27908168 41 GGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGTATATAT GGAAAAAAGTAAGACTGAAGCACACATGGAAGAGTATATAT < 41bp 1 0.45793985459062 1 0.454443901777267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908148 chr12:27908150 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_16815 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr6 33172455 33172455 1 + C G BLCA 33172450 + 33172430 33172470 41 CCACCCACAGCCCGCCATGGCGTCTCAGCTCCAGAACCGAC CCACCCACAGCCCGCCATGGCGTCTGAGCTCCAGAACCGAC < 41bp 1 0.19540983687017 1 0.102204293012619 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSD17B8 ENSG00000204228 CDS Human protein_coding chr6:33172450 chr6:33172455 nonsynonymous SNV 0.997 0 26 hm5C_associated_SNPs_16817 0 0 1 DDX3X POSTAR2 ENCODE chr6:33172452-33172499
64251 chr15 22993125 22993125 1 + C T BLCA 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGGAGGTGGGGAACGCCATTCTCTTCTGCCTGCTCATCGAG < 41bp 1 0.480835170107808 1 0.377755969762802 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993125 synonymous SNV . 0 20 hm5C_associated_SNPs_16818 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:22993117-22993138
64251 chr7 155534734 155534734 1 + G A BLCA 155534723 + 155534703 155534743 41 TGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAA TGGCGGGTTCCAGAAGCTCACAGGGAAAGACAGAAGTGAAA < 41bp 1 0.705299708783761 1 0.3010333776474 experiment 0.589400582432479 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534723 chr7:155534734 synonymous SNV . 0 32 hm5C_associated_SNPs_16819 0 0 2 UCHL5 POSTAR2 ENCODE chr7:155534697-155534783
64251 chr16 697470 697470 1 + C T BLCA 697463 + 697443 697483 41 GTGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC GTGTGAATGGCCGGCGGGCCCCCTCCATGTCCCCATCCTTC < 41bp 1 0.12016984133231 1 0.0445164442062378 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697463 chr16:697470 nonsynonymous SNV 0.042 0 28 hm5C_associated_SNPs_16820 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:697447-697484
64251 chr21 45222172 45222172 1 + G C BLCA 45222163 + 45222143 45222183 41 CCTGGTTCTCAGGCATTTTCCCTGAAGATGAGATCCCAGAG CCTGGTTCTCAGGCATTTTCCCTGAAGATCAGATCCCAGAG < 41bp 1 0.647037920837462 1 0.348154246807098 experiment 0.705924158325076 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45222163 chr21:45222172 nonsynonymous SNV 0.007 1 30 hm5C_associated_SNPs_16821 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:45222160-45222180
64251 chr20 34092600 34092600 1 + G C BLCA 34092606 + 34092586 34092626 41 AAACCTCCCCAATGGAGGAACAATCTCTAAAACTTGATTCT AAACCTCCCCAATGCAGGAACAATCTCTAAAACTTGATTCT < 41bp 1 0.0317093822842913 1 0.0377832651138306 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP250 ENSG00000126001 CDS Human protein_coding chr20:34092606 chr20:34092600 nonsynonymous SNV 0.019 1 15 hm5C_associated_SNPs_16822 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34092567-34092620
64251 chr12 27788022 27788022 1 + C G BLCA 27788020 + 27788000 27788040 41 CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA CCCAGATTCAACAGCAGAAACGGTTGTTGAATGGCTTCAGA < 41bp 1 0.391962270366767 1 0.14746367931366 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27788020 chr12:27788022 nonsynonymous SNV 0.095 2 23 hm5C_associated_SNPs_16823 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27787892-27788054
64251 chr10 14909867 14909867 1 + G C BLCA 14909880 + 14909860 14909900 41 TGAGTCTGATGGGAAGAACTCTGCCAAAGAGGAAACCAAGT TGAGTCTCATGGGAAGAACTCTGCCAAAGAGGAAACCAAGT < 41bp 1 0.261756810531346 1 0.134808361530304 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14909880 chr10:14909867 nonsynonymous SNV 0.975 1 8 hm5C_associated_SNPs_16824 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:14909841-14909879
64251 chr16 31470893 31470893 1 + C T BLCA 31470910 + 31470890 31470930 41 CCTCGCGCAGCTCGCGGCGGCGGCCGGGGAGGCTCTGGGTG CCTTGCGCAGCTCGCGGCGGCGGCCGGGGAGGCTCTGGGTG < 41bp 1 0.454562523916599 1 0.667645931243896 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31470910 chr16:31470893 synonymous SNV . 0 4 hm5C_associated_SNPs_16825 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:31470860-31470893
64251 chrX 129149535 129149535 1 + G A BLCA 129149555 + 129149535 129149575 41 GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG AACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG < 41bp 1 0.163468088835684 1 0.0873195230960846 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149555 chrX:129149535 synonymous SNV . 0 1 hm5C_associated_SNPs_16826 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chrX:129149520-129149540
64251 chr1 109643217 109643217 1 + G C BLCA 109643199 + 109643179 109643219 41 ATAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAG ATAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCCAG < 41bp 1 0.721551579859346 1 0.388178706169128 experiment 0.556896840281309 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643199 chr1:109643217 . . 0 39 hm5C_associated_SNPs_16827 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643200 + 109643180 109643220 41 TAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGG TAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCCAGG < 41bp 1 0.553904505851117 1 0.552452385425568 experiment 0.892190988297765 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643200 chr1:109643217 . . 0 38 hm5C_associated_SNPs_16828 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643201 + 109643181 109643221 41 AGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGC AGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCCAGGC < 41bp 1 0.592801187111848 1 0.903638482093811 experiment 0.814397625776303 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643201 chr1:109643217 . . 0 37 hm5C_associated_SNPs_16829 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643202 + 109643182 109643222 41 GACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCG GACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCCAGGCG < 41bp 1 0.462553878250647 1 0.736834049224854 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643202 chr1:109643217 . . 0 36 hm5C_associated_SNPs_16830 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643205 + 109643185 109643225 41 GAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATT GAGGCCGGGCTTGTCCCCGGCCACTGATTATCCAGGCGATT < 41bp 1 0.0774856077026185 1 0.0838050842285156 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643205 chr1:109643217 . . 0 33 hm5C_associated_SNPs_16831 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643206 + 109643186 109643226 41 AGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATTC AGGCCGGGCTTGTCCCCGGCCACTGATTATCCAGGCGATTC < 41bp 1 0.354482229573776 1 0.0278176665306091 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643206 chr1:109643217 . . 0 32 hm5C_associated_SNPs_16832 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643208 + 109643188 109643228 41 GCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATTCTG GCCGGGCTTGTCCCCGGCCACTGATTATCCAGGCGATTCTG < 41bp 1 0.526340458138631 1 0.0626833736896515 experiment 0.947319083722739 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643208 chr1:109643217 . . 0 30 hm5C_associated_SNPs_16833 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643221 + 109643201 109643241 41 CCGGCCACTGATTATCGAGGCGATTCTGATCTGGGCACGGC CCGGCCACTGATTATCCAGGCGATTCTGATCTGGGCACGGC < 41bp 1 0.265351589666251 1 0.374196976423264 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643221 chr1:109643217 . . 0 17 hm5C_associated_SNPs_16834 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 109643217 109643217 1 + G C BLCA 109643226 + 109643206 109643246 41 CACTGATTATCGAGGCGATTCTGATCTGGGCACGGCCACCG CACTGATTATCCAGGCGATTCTGATCTGGGCACGGCCACCG < 41bp 1 0.616393123303669 1 0.0527658462524414 experiment 0.767213753392662 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643226 chr1:109643217 . . 0 12 hm5C_associated_SNPs_16835 0 0 115 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643197-109643234
64251 chr1 12364770 12364770 1 + G C BLCA 12364755 + 12364735 12364775 41 AGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAAGAGTCC AGCAAGGGCCGCAACCCACACTGTCTGTTGGCCAACAGTCC < 41bp 1 0.0604839061279629 1 0.0676746964454651 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12364755 chr1:12364770 nonsynonymous SNV 0.281 0 36 hm5C_associated_SNPs_16842 0 0 4 DDX24 POSTAR2 ENCODE chr1:12364705-12364781
64251 chr7 128407602 128407602 1 + G A BLCA 128407598 + 128407578 128407618 41 GTTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAA GTTGAGTTTCGGGATAAGAACCGTAATGGGAAGATGGACAA < 41bp 1 0.654714529178493 1 0.0463862121105194 experiment 0.690570941643014 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407598 chr7:128407602 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_16843 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr7 128407602 128407602 1 + G A BLCA 128407599 + 128407579 128407619 41 TTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAAG TTGAGTTTCGGGATAAGAACCGTAATGGGAAGATGGACAAG < 41bp 1 0.633757563779847 1 0.255654573440552 experiment 0.732484872440306 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407599 chr7:128407602 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_16844 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr9 140166654 140166654 1 + C T BLCA 140166668 + 140166648 140166688 41 TGGCTTCTTCCTCACCGCCTCTCCAAGGTAGGCCTGCTGGG TGGCTTTTTCCTCACCGCCTCTCCAAGGTAGGCCTGCTGGG < 41bp 1 0.663035299110931 1 0.928530931472778 experiment 0.673929401778138 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140166668 chr9:140166654 synonymous SNV . 0 7 hm5C_associated_SNPs_16845 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:140166651-140166674
64251 chr19 13051185 13051185 1 + G A BLCA 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAAATAAAG < 41bp 1 0.328975662000995 1 0.209674388170242 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051185 synonymous SNV . 0 35 hm5C_associated_SNPs_16846 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051185 13051185 1 + G A BLCA 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTGCCACCCAAGAAAATAAAGGATC < 41bp 1 0.38814611835477 1 0.134268015623093 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051185 synonymous SNV . 0 31 hm5C_associated_SNPs_16847 0 0 40 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr6 157528023 157528023 1 + C G BLCA 157528014 + 157527994 157528034 41 ATCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGA ATCCAGCAAGCCAAAAGTCACCGGAACATGAAGCTGCTGGA < 41bp 1 0.288063783885162 1 0.278240025043488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528014 chr6:157528023 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_16848 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:157528022-157528023
64251 chr6 157528023 157528023 1 + C G BLCA 157528015 + 157527995 157528035 41 TCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGAG TCCAGCAAGCCAAAAGTCACCGGAACATGAAGCTGCTGGAG < 41bp 1 0.387600970598001 1 0.837726473808289 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528015 chr6:157528023 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_16849 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:157528022-157528023
64251 chr21 45113165 45113165 1 + G C BLCA 45113170 + 45113150 45113190 41 CCTCCACGGGGTGCTGAAGACCCCCACCAGCTCACCTGCCA CCTCCACGGGGTGCTCAAGACCCCCACCAGCTCACCTGCCA < 41bp 1 0.269998023777899 1 0.081935316324234 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP1B ENSG00000160208 CDS Human protein_coding chr21:45113170 chr21:45113165 synonymous SNV . 0 16 hm5C_associated_SNPs_16850 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704216 chr21:45113160-45113180
64251 chr19 13051415 13051415 1 + G A BLCA 13051402 + 13051382 13051422 41 GACCCTGATGCTAAGAAGCCCGAGGACTGGGATGAAGAGAT GACCCTGATGCTAAGAAGCCCGAGGACTGGGATAAAGAGAT < 41bp 1 0.545850874507467 1 0.563229858875275 experiment 0.908298250985067 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13051402 chr19:13051415 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_16860 0 0 49 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051391-13051420
64251 chr19 13051418 13051418 1 + G A BLCA 13051402 + 13051382 13051422 41 GACCCTGATGCTAAGAAGCCCGAGGACTGGGATGAAGAGAT GACCCTGATGCTAAGAAGCCCGAGGACTGGGATGAAAAGAT < 41bp 1 0.546786786045473 1 0.703466057777405 experiment 0.906426427909054 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13051402 chr19:13051418 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_16861 0 0 49 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051391-13051420
64251 chr1 45267308 45267308 1 + C T BLCA 45267317 + 45267297 45267337 41 CTGGCCCACATCTGGAAGGCCCGGCACACCCTGTTGGAGCC CTGGCCCACATTTGGAAGGCCCGGCACACCCTGTTGGAGCC < 41bp 1 0.201245626668581 1 0.412274360656738 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267317 chr1:45267308 synonymous SNV . 0 12 hm5C_associated_SNPs_16862 0 0 1 PRPF8 POSTAR2 ENCODE chr1:45267259-45267329
64251 chr22 24226515 24226515 1 + G A BLCA 24226534 + 24226514 24226554 41 AGAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGG AAAGCTGTTTGACCAGATGGCCAGGCCTGCTGCCTGCATGG < 41bp 1 0.381549959870403 1 0.253114998340607 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24226534 chr22:24226515 nonsynonymous SNV 0.992 5 2 hm5C_associated_SNPs_16863 0 0 1 PPIG POSTAR2 ENCODE chr22:24226487-24226531
64251 chr8 68007756 68007756 1 + G A BLCA 68007774 + 68007754 68007794 41 AAGAAGTGGGCATTTCCAACCTAAAACATCAAAGGTTTGCA AAAAAGTGGGCATTTCCAACCTAAAACATCAAAGGTTTGCA < 41bp 1 0.366241783808001 1 0.388838171958923 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68007774 chr8:68007756 nonsynonymous SNV 0.859 1 3 hm5C_associated_SNPs_16864 0 0 2 UCHL5 POSTAR2 ENCODE chr8:68007754-68007846
64251 chr11 107917093 107917093 1 + G A BLCA 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGTTTATTAAGCAAGCACAAGCAGTAAGTTCTACATGC < 41bp 1 0.312319609196946 1 0.266749799251556 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917093 synonymous SNV . 0 23 hm5C_associated_SNPs_16865 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr22 39770461 39770461 1 + C T BLCA 39770450 + 39770430 39770470 41 ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTCACCTGCCTG ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTTACCTGCCTG < 41bp 1 0.63282118563739 1 0.272063881158829 experiment 0.734357628725221 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39770450 chr22:39770461 synonymous SNV . 0 32 hm5C_associated_SNPs_16866 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39770430-39770489
64251 chr1 1246357 1246357 1 + G A BLCA 1246369 + 1246349 1246389 41 GTGAAGACGATTCTGGAGAGCCAAGATCCCCTGGGCAAGCA GTGAAGACAATTCTGGAGAGCCAAGATCCCCTGGGCAAGCA < 41bp 1 0.296945341377314 1 0.223113805055618 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246369 chr1:1246357 synonymous SNV . 0 9 hm5C_associated_SNPs_16867 0 0 6 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr1:1246338-1246363
64251 chr12 57599381 57599381 1 + C G BLCA 57599390 + 57599370 57599410 41 TGCTCCCAGCTCTGCAACAACACCAAGGGCGGCCACCTCTG TGCTCCCAGCTGTGCAACAACACCAAGGGCGGCCACCTCTG < 41bp 1 0.429994985162989 1 0.265861868858337 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LRP1 ENSG00000123384 CDS Human protein_coding chr12:57599390 chr12:57599381 synonymous SNV . 0 12 hm5C_associated_SNPs_16868 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:57599359-57599388
64251 chr11 65826374 65826374 1 + C T BLCA 65826372 + 65826352 65826392 41 CGAGGGGTGTCCTCTGAGAGCTCTGGGGACCGGGAGAAAGA CGAGGGGTGTCCTCTGAGAGCTTTGGGGACCGGGAGAAAGA < 41bp 1 0.245988896469722 1 0.167964398860931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826372 chr11:65826374 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_16869 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chr11 65826374 65826374 1 + C T BLCA 65826381 + 65826361 65826401 41 TCCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCG TCCTCTGAGAGCTTTGGGGACCGGGAGAAAGACTCAACCCG < 41bp 1 0.578773676124234 1 0.578802049160004 experiment 0.842452647751533 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826381 chr11:65826374 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_16870 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chr1 41494360 41494360 1 - G A BLCA 41494376 - 41494356 41494396 41 TCGGACCGATACCTGGAGAGCCGCGATGCCTCTCGACTGAG TCGGACCGATACCTGGAGAGCCGCGATGCCTCTCGATTGAG < 41bp 1 0.420441454775155 1 0.158170282840729 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCMH1 ENSG00000010803 CDS Human protein_coding chr1:41494376 chr1:41494360 synonymous SNV . 0 37 hm5C_associated_SNPs_16871 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:41494334-41494361
64251 chr8 121468867 121468867 1 + C A BLCA 121468848 + 121468828 121468868 41 ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGACTCA ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGACTAA < 41bp 1 0.393755359137925 1 0.220908403396606 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTBP ENSG00000172167 CDS Human protein_coding chr8:121468848 chr8:121468867 stopgain 0.949 0 40 hm5C_associated_SNPs_16872 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr8:121468847-121468872
64251 chr13 114541062 114541062 1 - G A BLCA 114541049 - 114541029 114541069 41 CTCTCCTCTGATGGCAGGACCTGCCAAGGTAAGGCCCTGGG CTCTCCTTTGATGGCAGGACCTGCCAAGGTAAGGCCCTGGG < 41bp 1 0.304549784733654 1 0.0914443731307983 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541049 chr13:114541062 nonsynonymous SNV 0.001 1 8 hm5C_associated_SNPs_16873 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:114541046-114541069
64251 chr1 218458681 218458681 1 + C G BLCA 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTGACGTG < 41bp 1 0.286005245175838 1 0.413005471229553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458681 stopgain 0.715 0 36 hm5C_associated_SNPs_16874 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr2 101598812 101598812 1 + C T BLCA 101598827 + 101598807 101598847 41 CAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGTGATCCC CAGCTTTGCCTGGTCCAGGACTCCAACGTCCAGGTGATCCC < 41bp 1 0.722171442379677 1 0.977734744548798 experiment 0.555657115240646 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101598827 chr2:101598812 synonymous SNV . 0 6 hm5C_associated_SNPs_16875 0 0 5 GRWD1 POSTAR2 ENCODE chr2:101598707-101598877
64251 chr1 22835057 22835057 1 + C T BLCA 22835072 + 22835052 22835092 41 TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG TGGTTTAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG < 41bp 1 0.445053283914895 1 0.749760985374451 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835072 chr1:22835057 nonsynonymous SNV 0.996 2 6 hm5C_associated_SNPs_16876 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr1:22835040-22835063
64251 chr12 54394372 54394372 1 + G A BLCA 54394362 + 54394342 54394382 41 CCCGGGCGCCGCGCGGACTGCGGCCCAGGGGAGGGCCGCAG CCCGGGCGCCGCGCGGACTGCGGCCCAGGGAAGGGCCGCAG < 41bp 1 0.735456447886882 1 0.64396995306015 experiment 0.529087104226237 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394362 chr12:54394372 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_16877 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr12 54394372 54394372 1 + G A BLCA 54394365 + 54394345 54394385 41 GGGCGCCGCGCGGACTGCGGCCCAGGGGAGGGCCGCAGCTA GGGCGCCGCGCGGACTGCGGCCCAGGGAAGGGCCGCAGCTA < 41bp 1 0.507641595497004 1 0.528467774391174 experiment 0.984716809005992 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394365 chr12:54394372 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_16878 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr12 54394372 54394372 1 + G A BLCA 54394366 + 54394346 54394386 41 GGCGCCGCGCGGACTGCGGCCCAGGGGAGGGCCGCAGCTAC GGCGCCGCGCGGACTGCGGCCCAGGGAAGGGCCGCAGCTAC < 41bp 1 0.704715765661597 1 0.849189519882202 experiment 0.590568468676806 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394366 chr12:54394372 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_16879 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr12 54394372 54394372 1 + G A BLCA 54394377 + 54394357 54394397 41 GACTGCGGCCCAGGGGAGGGCCGCAGCTACCCGGACTACAT GACTGCGGCCCAGGGAAGGGCCGCAGCTACCCGGACTACAT < 41bp 1 0.659906160232138 1 0.28791332244873 experiment 0.680187679535724 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394377 chr12:54394372 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_16880 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr12 54394372 54394372 1 + G A BLCA 54394378 + 54394358 54394398 41 ACTGCGGCCCAGGGGAGGGCCGCAGCTACCCGGACTACATG ACTGCGGCCCAGGGAAGGGCCGCAGCTACCCGGACTACATG < 41bp 1 0.696339559665387 1 0.229491114616394 experiment 0.607320880669226 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394378 chr12:54394372 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_16881 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr12 54394372 54394372 1 + G A BLCA 54394380 + 54394360 54394400 41 TGCGGCCCAGGGGAGGGCCGCAGCTACCCGGACTACATGTA TGCGGCCCAGGGAAGGGCCGCAGCTACCCGGACTACATGTA < 41bp 1 0.397792980055693 1 0.267610371112823 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394380 chr12:54394372 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_16882 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54394372-54394373
64251 chr14 93299524 93299524 1 + C A BLCA 93299518 + 93299498 93299538 41 AGTCTGAGTTAGAAAATCGACTCCATCAGCTAACAGAGACT AGTCTGAGTTAGAAAATCGACTCCATAAGCTAACAGAGACT < 41bp 1 0.75036753894395 1 0.809699475765228 experiment 0.4992649221121 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299518 chr14:93299524 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_16883 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93299508-93299540
64251 chr3 136667120 136667120 1 + C T BLCA 136667129 + 136667109 136667149 41 TTTCTCAGTATCACTAAAAGCACAAGGGAAAAACAAGCATT TTTCTCAGTATTACTAAAAGCACAAGGGAAAAACAAGCATT < 41bp 1 0.743782229408404 1 0.310265362262726 experiment 0.512435541183193 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCK1 ENSG00000158092 CDS Human protein_coding chr3:136667129 chr3:136667120 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_16884 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:136667100-136667120
64251 chr8 41355114 41355114 1 + C T BLCA 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGGCCAGTCATATCTTGAAGGTTGT < 41bp 1 0.153513517466846 1 0.156774312257767 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355114 synonymous SNV . 0 32 hm5C_associated_SNPs_16885 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:41355093-41355115
64251 chr14 37739687 37739687 1 + C T BLCA 37739679 + 37739659 37739699 41 AGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA AGAGAAAACTAAAGTTTAAGCTGGAACTTCAAGAGAAAGAA < 41bp 1 0.637133828047031 1 0.482292026281357 experiment 0.725732343905938 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37739679 chr14:37739687 synonymous SNV . 0 29 hm5C_associated_SNPs_16886 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:37739651-37739696
64251 chr22 50609337 50609337 1 + C T BLCA 50609321 + 50609301 50609341 41 CTGCCGTTCGACCGGGTGGTCACCATCGGCACCGTGCTGGT CTGCCGTTCGACCGGGTGGTCACCATCGGCACCGTGTTGGT < 41bp 1 0.794233686640101 1 0.460719883441925 experiment 0.411532626719799 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PANX2 ENSG00000073150 CDS Human protein_coding chr22:50609321 chr22:50609337 synonymous SNV . 0 37 hm5C_associated_SNPs_16888 0 0 1 IGF2BP2 POSTAR2 ENCODE chr22:50609290-50609376
64251 chr3 126724992 126724992 1 + C T BLCA 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTTGTCTTCTACAACTGCAGCGTCCACCAGTC < 41bp 1 0.232396702415878 1 0.149115413427353 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126724992 synonymous SNV . 0 12 hm5C_associated_SNPs_16889 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:126724978-126725006
64251 chr11 94554952 94554952 1 + C T BLCA 94554949 + 94554929 94554969 41 ACCGGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT ACCGGGTGCTTCACCAGGAACTTTAGGGTTACTACGACAAT < 41bp 1 0.156933209467698 1 0.0426737070083618 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94554949 chr11:94554952 stopgain 0.999 1 24 hm5C_associated_SNPs_16890 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:94554918-94554952
64251 chr5 149925000 149925000 1 + C T BLCA 149925006 + 149924986 149925026 41 CCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGA CCCAAAGCCAAGGTTCTGACCATCCTCATCAACCCCGCGGA < 41bp 1 0.146758227461805 1 0.041012167930603 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDST1 ENSG00000070614 CDS Human protein_coding chr5:149925006 chr5:149925000 synonymous SNV . 0 15 hm5C_associated_SNPs_16891 0 0 4 IGF2BP1 POSTAR2 ENCODE chr5:149924953-149925004
64251 chr19 1978471 1978471 1 + C T BLCA 1978465 + 1978445 1978485 41 CGATCAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGG CGATCAAGTCCCGGGCCCCGCAGCTGTACCTGGAGTACCGG < 41bp 1 0.533353644563467 1 0.707549750804901 experiment 0.933292710873066 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1978465 chr19:1978471 nonsynonymous SNV 0.999 1 27 hm5C_associated_SNPs_16894 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:1978470-1978510
64251 chr1 41475876 41475876 1 + G C BLCA 41475860 + 41475840 41475880 41 TATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAAT TATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTCAAAT < 41bp 1 0.326585811537371 1 0.839017391204834 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41475860 chr1:41475876 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_16895 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41475827-41475909
64251 chr17 39978063 39978063 1 + G A BLCA 39978062 + 39978042 39978082 41 CAAGGATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT CAAGGATGGCGAGGTCCCTCCAGAGGAGGTGGGTGAAGGTT < 41bp 1 0.530462483004061 1 0.742897391319275 experiment 0.939075033991879 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978062 chr17:39978063 synonymous SNV . 0 22 hm5C_associated_SNPs_16896 0 0 3 BUD13 POSTAR2 ENCODE chr17:39978027-39978066
64251 chr13 111287895 111287895 1 + C A BLCA 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTACAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA < 41bp 1 0.765763992262069 1 0.535124123096466 experiment 0.468472015475862 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287895 synonymous SNV . 0 6 hm5C_associated_SNPs_16897 0 0 6 BUD13 POSTAR2 ENCODE chr13:111287752-111287967
64251 chr2 62934344 62934344 1 + G C BLCA 62934334 + 62934314 62934354 41 TTGACTGATCATCATGGCTTCAGTTTGGAAGAGACTGCAGC TTGACTGATCATCATGGCTTCAGTTTGGAACAGACTGCAGC < 41bp 1 0.114925097287137 1 0.0468286275863647 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1 ENSG00000115504 CDS Human protein_coding chr2:62934334 chr2:62934344 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_16898 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:62934273-62934347
64251 chr3 47382156 47382156 1 + G C BLCA 47382146 + 47382126 47382166 41 TCCCTCAGCTCCGTGGAGACCTACTCACCTGAGACGGACAA TCCCTCAGCTCCGTGGAGACCTACTCACCTCAGACGGACAA < 41bp 1 0.333970286770488 1 0.0921139121055603 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47382146 chr3:47382156 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_16899 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:47382151-47382184
64251 chr1 24998057 24998057 1 + G C BLCA 24998049 + 24998029 24998069 41 AGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAG AGCTGCCACAACCACATTAGCACAGGAACAGCCAGTGGCAG < 41bp 1 0.680922557544224 1 0.172869205474854 experiment 0.638154884911552 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24998049 chr1:24998057 nonsynonymous SNV 0.539 2 29 hm5C_associated_SNPs_16900 0 0 2 TRA2A POSTAR2 ENCODE chr1:24998038-24998078
64251 chr6 36564702 36564702 1 + G C BLCA 36564715 + 36564695 36564735 41 ATTTGAAGATCCCCGAGATGCAGCTGATGCAGTCCGAGAGC ATTTGAACATCCCCGAGATGCAGCTGATGCAGTCCGAGAGC < 41bp 1 0.766310980861482 1 0.211029767990112 experiment 0.467378038277036 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564715 chr6:36564702 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_16902 0 0 38 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:36564702-36564730
64251 chr12 49888630 49888630 1 + C A BLCA 49888623 + 49888603 49888643 41 TTCAAGAGGAACAGTCTGCGCCTTCCTCAGAGAAAGGTGGT TTCAAGAGGAACAGTCTGCGCCTTCCTAAGAGAAAGGTGGT < 41bp 1 0.0126600320614985 1 0.331433117389679 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888623 chr12:49888630 stopgain 0.995 0 28 hm5C_associated_SNPs_16903 0 0 1 PPIG POSTAR2 ENCODE chr12:49888593-49888651
64251 chrX 24073096 24073096 1 + G A BLCA 24073094 + 24073074 24073114 41 TCTTTTGGCAACATGGCGGGCGGAGAAGCTGGAGTGACTCT TCTTTTGGCAACATGGCGGGCGAAGAAGCTGGAGTGACTCT < 41bp 1 0.518609598875443 1 0.482771635055542 experiment 0.962780802249114 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24073094 chrX:24073096 nonsynonymous SNV 0.255 1 23 hm5C_associated_SNPs_16904 0 0 21 SRSF1 POSTAR2 GSE83923,GSM2221667 chrX:24073080-24073100
64251 chr11 64852679 64852679 1 + G A BLCA 64852682 + 64852662 64852702 41 CTGGCCAGCCGAGAGACGACCCGCCTTGTCTGCTATGGTGA CTGGCCAGCCGAGAGACAACCCGCCTTGTCTGCTATGGTGA < 41bp 1 0.29586248073978 1 0.420460283756256 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64852682 chr11:64852679 synonymous SNV . 0 18 hm5C_associated_SNPs_16905 0 0 2 DDX24 POSTAR2 ENCODE chr11:64852664-64852702
64251 chr1 231377135 231377135 1 + C A BLCA 231377115 + 231377095 231377135 41 CCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC CCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTA < 41bp 1 0.660183503418583 1 0.510588765144348 experiment 0.679632993162833 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231377115 chr1:231377135 nonsynonymous SNV 0.001 0 41 hm5C_associated_SNPs_16906 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr1:231377098-231377141
64251 chr7 69583203 69583203 1 + G A BLCA 69583186 + 69583166 69583206 41 AGTGGAGAATCCAAGGGCTTCCACCGGAGCAGCTCTCGGGA AGTGGAGAATCCAAGGGCTTCCACCGGAGCAGCTCTCAGGA < 41bp 1 0.111023582743347 1 0.175625592470169 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:69583186 chr7:69583203 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_16907 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221663 chr7:69583200-69583220
64251 chr12 109604795 109604795 1 + G A BLCA 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACACGCTTTGGGGGGGATCGGGTCATCGAAAAGGTACAG < 41bp 1 0.520430912309524 1 0.755707025527954 experiment 0.959138175380952 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604795 synonymous SNV . 0 32 hm5C_associated_SNPs_16908 0 0 3 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr1 29069442 29069442 1 + C T BLCA 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATTGTGGC < 41bp 1 0.24611755793548 1 0.197532147169113 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069442 synonymous SNV . 0 36 hm5C_associated_SNPs_16909 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29069427-29069451
64251 chr19 17313011 17313011 1 + G C BLCA 17313031 + 17313011 17313051 41 GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT CAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT < 41bp 1 0.131886342077661 1 0.0650624632835388 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17313031 chr19:17313011 nonsynonymous SNV 0.003 1 1 hm5C_associated_SNPs_16910 0 0 1 PPIG POSTAR2 ENCODE chr19:17312968-17313016
64251 chr10 115644091 115644091 1 + G A BLCA 115644100 + 115644080 115644120 41 GAGCAAAAGGAGAACAACAACCCATTAGTTCCCCTTGGGAT GAGCAAAAGGAAAACAACAACCCATTAGTTCCCCTTGGGAT < 41bp 1 0.196902988977552 1 0.215644210577011 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115644100 chr10:115644091 nonsynonymous SNV 0.620 0 12 hm5C_associated_SNPs_16911 0 0 2 UCHL5 POSTAR2 ENCODE chr10:115644009-115644144
64251 chrX 53114927 53114927 1 + G C BLCA 53114930 + 53114910 53114950 41 ACAATTCATGACATCAAGATCTCTGACTTCATGGAGACCAC ACAATTCATGACATCAACATCTCTGACTTCATGGAGACCAC < 41bp 1 0.432196208756242 1 0.316030502319336 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53114930 chrX:53114927 nonsynonymous SNV 0.999 3 18 hm5C_associated_SNPs_16912 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chrX:53114919-53114949
64251 chr19 34868416 34868416 1 + G C BLCA 34868408 + 34868388 34868428 41 CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGG CATCTTCGCCCCTGTGCCAGCGTGTCCGCAGCGGTGACTGG < 41bp 1 0.211468235673606 1 0.450385481119156 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868408 chr19:34868416 synonymous SNV . 0 29 hm5C_associated_SNPs_16913 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr19 34868416 34868416 1 + G C BLCA 34868413 + 34868393 34868433 41 TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGGAAGGG TCGCCCCTGTGCCAGCGTGTCCGCAGCGGTGACTGGAAGGG < 41bp 1 0.541858409218026 1 0.222105771303177 experiment 0.916283181563949 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868413 chr19:34868416 synonymous SNV . 0 24 hm5C_associated_SNPs_16914 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr7 150761792 150761792 1 + G A BLCA 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GCCAGCAAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC < 41bp 1 0.597178286413091 1 0.490647196769714 experiment 0.805643427173818 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761792 nonsynonymous SNV 0.030 1 7 hm5C_associated_SNPs_16916 0 0 3 DDX24 POSTAR2 ENCODE chr7:150761764-150761844
64251 chr6 80741194 80741194 1 + C G BLCA 80741213 + 80741193 80741233 41 TCTTCTTCAGCAAATGAATGCATTTCGGTTAAAGGAAGAAT TGTTCTTCAGCAAATGAATGCATTTCGGTTAAAGGAAGAAT < 41bp 1 0.0240543793760812 1 0.11857658624649 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTK ENSG00000112742 CDS Human protein_coding chr6:80741213 chr6:80741194 nonsynonymous SNV 0.076 3 2 hm5C_associated_SNPs_16917 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:80741180-80741200
64251 chr1 145509201 145509201 1 + G C BLCA 145509191 + 145509171 145509211 41 GCCGAAGACGCAGCAGAAGTCCAGACCGGAGACGTCGCTGA GCCGAAGACGCAGCAGAAGTCCAGACCGGACACGTCGCTGA < 41bp 1 0.376230144296306 1 0.389895349740982 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM8A ENSG00000131795 CDS Human other chr1:145509191 chr1:145509201 nonsynonymous SNV . 0 31 hm5C_associated_SNPs_16918 0 0 1 U2AF1 POSTAR2 ENCODE chr1:145509148-145509201
64251 chr1 145509201 145509201 1 + G C BLCA 145509206 + 145509186 145509226 41 GAAGTCCAGACCGGAGACGTCGCTGACAGGTCCTCTGTTGT GAAGTCCAGACCGGACACGTCGCTGACAGGTCCTCTGTTGT < 41bp 1 0.162758147525382 1 0.156719475984573 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM8A ENSG00000131795 CDS Human other chr1:145509206 chr1:145509201 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_16919 0 0 1 U2AF1 POSTAR2 ENCODE chr1:145509148-145509201
64251 chr17 79408925 79408925 1 + G A BLCA 79408935 + 79408915 79408955 41 CTTCCCCAGCGTGGCCCGGGCCGCCCCTGCCCACCCCATGG CTTCCCCAGCATGGCCCGGGCCGCCCCTGCCCACCCCATGG < 41bp 1 0.100989807051459 1 0.106438338756561 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79408935 chr17:79408925 nonsynonymous SNV 0.436 0 11 hm5C_associated_SNPs_16920 0 0 1 METAP2 POSTAR2 ENCODE chr17:79408885-79409026
64251 chr5 43649344 43649344 1 + C G BLCA 43649348 + 43649328 43649368 41 TGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACCCCTG TGGCATTGTGGGGTATGATACCGTCTGGGGAGTGACCCCTG < 41bp 1 0.257307144135807 1 0.200734555721283 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43649348 chr5:43649344 nonsynonymous SNV 0.290 3 17 hm5C_associated_SNPs_16922 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:43649340-43649353
64251 chr20 3781979 3781979 1 + G C BLCA 3781963 + 3781943 3781983 41 CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCACAGGG < 41bp 1 0.192163679300658 1 0.713423192501068 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781963 chr20:3781979 nonsynonymous SNV 0.000 0 37 hm5C_associated_SNPs_16923 0 0 2 GRWD1 POSTAR2 ENCODE chr20:3781902-3781988
64251 chr7 100201601 100201601 1 + T C BLCA 100201610 + 100201590 100201630 41 GGGCCAGACTGTGTCCCTCTCATTCCGAGTCTTCGACCTGG GGGCCAGACTGCGTCCCTCTCATTCCGAGTCTTCGACCTGG < 41bp 1 0.119360646102732 1 0.0332517325878143 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100201610 chr7:100201601 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_16925 0 0 2 RPS3 POSTAR2 ENCODE chr7:100201581-100201630
64251 chr19 10402264 10402264 1 + C T BLCA 10402280 + 10402260 10402300 41 CGTGCGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGA CGTGTGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGA < 41bp 1 0.186967830548423 1 0.346922367811203 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10402280 chr19:10402264 nonsynonymous SNV 0.163 0 5 hm5C_associated_SNPs_16936 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:10402238-10402299
64251 chr19 10402264 10402264 1 + C T BLCA 10402281 + 10402261 10402301 41 GTGCGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGAG GTGTGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGAG < 41bp 1 0.649783016449414 1 0.684191763401031 experiment 0.700433967101172 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10402281 chr19:10402264 nonsynonymous SNV 0.163 0 4 hm5C_associated_SNPs_16937 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:10402238-10402299
64251 chr9 133760714 133760714 1 + C T BLCA 133760722 + 133760702 133760742 41 CGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT CGAGTGTCTCTTTGGAAAACCCGCCAGCCTCCAGAGCGGAT < 41bp 1 0.0615627913581051 1 0.097014456987381 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760722 chr9:133760714 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_16944 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr9 133760714 133760714 1 + C T BLCA 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTTGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC < 41bp 1 0.0137738622173651 1 0.102829545736313 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760714 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_16945 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr1 44128690 44128690 1 + T C BLCA 44128686 + 44128666 44128706 41 CTTTGGCATGTGGAAGACATCCTTTGCTTGGCACACTGAAG CTTTGGCATGTGGAAGACATCCTTCGCTTGGCACACTGAAG < 41bp 1 0.0446852974231482 1 0.0826015174388885 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44128686 chr1:44128690 synonymous SNV . 0 25 hm5C_associated_SNPs_16946 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44128639-44128738
64251 chr1 109446807 109446807 1 + C G BLCA 109446818 + 109446798 109446838 41 CAAATGGTTCTTGGTCTGAGCTACAGCACAAATAACTCCAT CAAATGGTTGTTGGTCTGAGCTACAGCACAAATAACTCCAT < 41bp 1 0.607538260058799 1 0.408477783203125 experiment 0.784923479882402 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109446818 chr1:109446807 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_16947 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:109446798-109446836
64251 chr19 42406712 42406712 1 + G A BLCA 42406702 + 42406682 42406722 41 GTTTGATGGTGCTGAGGGCTCCTGGTTCCAGAAAATCTCCT GTTTGATGGTGCTGAGGGCTCCTGGTTCCAAAAAATCTCCT < 41bp 1 0.324256552490592 1 0.361678123474121 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42406702 chr19:42406712 synonymous SNV . 0 31 hm5C_associated_SNPs_16950 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42406701-42406739
64251 chr5 33463913 33463913 1 + G A BLCA 33463905 + 33463885 33463925 41 AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCC AATGGTAGTTCCAGTGGGACCAACCTGTAATGAATATGCCC < 41bp 1 0.308049833895081 1 0.349730789661407 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33463905 chr5:33463913 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_16951 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:33463880-33463920
64251 chr20 30898654 30898654 1 + C A BLCA 30898670 + 30898650 30898690 41 AATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA AATTACAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA < 41bp 1 0.660689437521751 1 0.707834303379059 experiment 0.678621124956498 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898670 chr20:30898654 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_16952 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30898619-30898656
64251 chr6 32947780 32947780 1 + G C BLCA 32947785 + 32947765 32947805 41 ATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCC ATAATCCAAGCCAGGCAGCCCTCTTTACGTGATTCAAACCC < 41bp 1 0.232229718243859 1 0.401530683040619 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32947785 chr6:32947780 nonsynonymous SNV 0.991 2 16 hm5C_associated_SNPs_16954 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:32947761-32947785
64251 chr10 17277378 17277378 1 + G A BLCA 17277369 + 17277349 17277389 41 TTGCCACCTACAGGAAGCTGCTGGAAGGCGAGGAGAGCAGG TTGCCACCTACAGGAAGCTGCTGGAAGGCAAGGAGAGCAGG < 41bp 1 0.70650357475124 1 0.55744481086731 experiment 0.58699285049752 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277369 chr10:17277378 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_16955 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr10 17277378 17277378 1 + G A BLCA 17277386 + 17277366 17277406 41 CTGCTGGAAGGCGAGGAGAGCAGGTAGGGAACTCAGACTTG CTGCTGGAAGGCAAGGAGAGCAGGTAGGGAACTCAGACTTG < 41bp 1 0.586591764762412 1 0.556146442890167 experiment 0.826816470475177 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277386 chr10:17277378 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_16956 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr19 45490649 45490649 1 + G A BLCA 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATGAGTTGTACAAGCAGTCAGATGAGGAGCAGGACTCGG < 41bp 1 0.631177281421354 1 0.531290292739868 experiment 0.737645437157291 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490649 nonsynonymous SNV 0.677 2 14 hm5C_associated_SNPs_16959 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45490645-45490675
64251 chr13 48832951 48832951 1 + C G BLCA 48832941 + 48832921 48832961 41 TTCTGAATGTAGGCTGGAACCTATTTGCCTCAGTCCTATCT TTCTGAATGTAGGCTGGAACCTATTTGCCTGAGTCCTATCT < 41bp 1 0.458225769417688 1 0.0257116258144379 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITM2B ENSG00000136156 CDS Human protein_coding chr13:48832941 chr13:48832951 nonsynonymous SNV 0.999 3 31 hm5C_associated_SNPs_16961 0 0 9 CPSF4 POSTAR2 GSE37401,GSM917667 chr13:48832937-48832962
64251 chr17 73695901 73695901 1 + G A BLCA 73695888 + 73695868 73695908 41 TTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAA TTTTCTGAAAGAGTTCGGAACATGTCGCCTGATAAAATCAA < 41bp 1 0.143172913284768 1 0.169961422681808 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695888 chr17:73695901 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_16962 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695901 73695901 1 + G A BLCA 73695893 + 73695873 73695913 41 TGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCC TGAAAGAGTTCGGAACATGTCGCCTGATAAAATCAAGATCC < 41bp 1 0.707375969240106 1 0.300473660230637 experiment 0.585248061519787 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695893 chr17:73695901 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_16963 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695901 73695901 1 + G A BLCA 73695896 + 73695876 73695916 41 AAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGC AAGAGTTCGGAACATGTCGCCTGATAAAATCAAGATCCCGC < 41bp 1 0.261232353133683 1 0.289749473333359 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695896 chr17:73695901 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_16964 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr9 131386709 131386709 1 + G A BLCA 131386723 + 131386703 131386743 41 CTGGATGAGAACTCGGCCTTCCTTCAGTTCAACTGGAAGGC CTGGATAAGAACTCGGCCTTCCTTCAGTTCAACTGGAAGGC < 41bp 1 0.0157705002557943 1 0.0562135577201843 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131386723 chr9:131386709 nonsynonymous SNV 0.974 2 7 hm5C_associated_SNPs_16965 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr9:131386700-131386720
64251 chr9 36204091 36204091 1 + G C BLCA 36204107 + 36204087 36204127 41 AGCAGAGTGGAAAGAAAAGGCAATAAAGGAGCTAGAAGAAT AGCACAGTGGAAAGAAAAGGCAATAAAGGAGCTAGAAGAAT < 41bp 1 0.368306188072634 1 0.202040106058121 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTA ENSG00000122705 CDS Human protein_coding chr9:36204107 chr9:36204091 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_16966 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:36204064-36204100
64251 chr22 41923373 41923373 1 + C T BLCA 41923388 + 41923368 41923408 41 AGCCTCGCCACCTTGGGGGCCGGGCCATCATCACCAAGAGC AGCCTTGCCACCTTGGGGGCCGGGCCATCATCACCAAGAGC < 41bp 1 0.272656086677968 1 0.46632319688797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923388 chr22:41923373 nonsynonymous SNV 0.994 4 6 hm5C_associated_SNPs_16967 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr22:41923358-41923379
64251 chr5 5464640 5464640 1 + C G BLCA 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCCTGTGCCTGGCCGACTGCCACCCTGTGCATCTGGC < 41bp 1 0.169077850785256 1 0.246437221765518 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464640 synonymous SNV . 0 23 hm5C_associated_SNPs_16968 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5464617-5464651
64251 chr17 70119082 70119082 1 + G A BLCA 70119073 + 70119053 70119093 41 GCCGACTCGCCACACTCCTCCTCCGGCATGAGCGAGGTGCA GCCGACTCGCCACACTCCTCCTCCGGCATAAGCGAGGTGCA < 41bp 1 0.627699070119316 1 0.782967209815979 experiment 0.744601859761369 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119073 chr17:70119082 nonsynonymous SNV 0.997 2 30 hm5C_associated_SNPs_16969 0 0 1 RPS3 POSTAR2 ENCODE chr17:70119055-70119114
64251 chr4 30723146 30723146 1 + C A BLCA 30723130 + 30723110 30723150 41 GCTCTCGCTCAGCCTGGCGGCCGCCAAGCAGCTCCTCCGGT GCTCTCGCTCAGCCTGGCGGCCGCCAAGCAGCTCCTACGGT < 41bp 1 0.13598428107401 1 0.112734407186508 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30723130 chr4:30723146 synonymous SNV . 0 37 hm5C_associated_SNPs_16970 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr4:30723132-30723159
64251 chr4 54257236 54257236 1 + G T BLCA 54257222 + 54257202 54257242 41 TATGGGTTTAATGAAGATACCTGGAAAGCTTACTGTGAAAA TATGGGTTTAATGAAGATACCTGGAAAGCTTACTTTGAAAA < 41bp 1 0.719454625316874 1 0.349318563938141 experiment 0.561090749366253 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54257222 chr4:54257236 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_16971 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:54257202-54257247
64251 chr14 56079010 56079010 1 + C T BLCA 56078994 + 56078974 56079014 41 GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGA GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTTGAGA < 41bp 1 0.210846323584143 1 0.115538060665131 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56078994 chr14:56079010 stopgain 0.987 0 37 hm5C_associated_SNPs_16972 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:56078976-56079017
64251 chr8 143782008 143782008 1 + G C BLCA 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACCTCACTGCGAGACAACGAGATCCAGAGGACTCC < 41bp 1 0.635070030463645 1 0.0983320474624634 experiment 0.729859939072711 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782008 synonymous SNV . 0 11 hm5C_associated_SNPs_16975 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chr17 66033495 66033495 1 + G C BLCA 66033483 + 66033463 66033503 41 CTTTTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAAT CTTTTCTCAAGGAAATGAGGCGTCGCAGAATACAGGTCAAT < 41bp 1 0.154894726175384 1 0.0847117602825165 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033483 chr17:66033495 nonsynonymous SNV 0.699 3 33 hm5C_associated_SNPs_16976 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033495 66033495 1 + G C BLCA 66033486 + 66033466 66033506 41 TTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTG TTCTCAAGGAAATGAGGCGTCGCAGAATACAGGTCAATGTG < 41bp 1 0.701108457232129 1 0.190320909023285 experiment 0.597783085535741 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033486 chr17:66033495 nonsynonymous SNV 0.699 3 30 hm5C_associated_SNPs_16977 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033495 66033495 1 + G C BLCA 66033488 + 66033468 66033508 41 CTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTGGA CTCAAGGAAATGAGGCGTCGCAGAATACAGGTCAATGTGGA < 41bp 1 0.711244204456015 1 0.736330091953278 experiment 0.57751159108797 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033488 chr17:66033495 nonsynonymous SNV 0.699 3 28 hm5C_associated_SNPs_16978 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033495 66033495 1 + G C BLCA 66033510 + 66033490 66033530 41 GAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGAT GAATACAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGAT < 41bp 1 0.582591724021547 1 0.447741091251373 experiment 0.834816551956906 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033510 chr17:66033495 nonsynonymous SNV 0.699 3 6 hm5C_associated_SNPs_16979 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr5 14482837 14482837 1 + G C BLCA 14482854 + 14482834 14482874 41 AAAGAAGGGCTTCTCCATGCCGGGATTCCTGTTTAAGAACA AAACAAGGGCTTCTCCATGCCGGGATTCCTGTTTAAGAACA < 41bp 1 0.568173311642359 1 0.652683675289154 experiment 0.863653376715282 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14482854 chr5:14482837 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_16980 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:14482834-14482884
64251 chr7 150737372 150737372 1 + C T BLCA 150737364 + 150737344 150737384 41 TTTTCTGACAGGTCCATGGCCAACCTCTCTGTCCTGTTTGG TTTTCTGACAGGTCCATGGCCAACCTCTTTGTCCTGTTTGG < 41bp 1 0.158048972573445 1 0.036786288022995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150737364 chr7:150737372 nonsynonymous SNV 0.955 4 29 hm5C_associated_SNPs_16981 0 0 1 SF3B4 POSTAR2 ENCODE chr7:150737320-150737373
64251 chr1 156756616 156756616 1 + A G BLCA 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTG < 41bp 1 0.231980335859255 1 0.212018758058548 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756616 nonsynonymous SNV 0.998 3 41 hm5C_associated_SNPs_16982 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156756596-156756637
64251 chr20 37154656 37154656 1 + C T BLCA 37154672 + 37154652 37154692 41 GAAACGGACCCCAACAACACCCAAATGATATTAGGTTTGTA GAAATGGACCCCAACAACACCCAAATGATATTAGGTTTGTA < 41bp 1 0.0889109575048024 1 0.249909609556198 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37154672 chr20:37154656 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_16984 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:37154599-37154673
64251 chr1 161138804 161138804 1 + C T BLCA 161138789 + 161138769 161138809 41 TGCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCAC TGCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTTAGCAC < 41bp 1 0.269249181982173 1 0.127410054206848 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138789 chr1:161138804 nonsynonymous SNV 0.887 5 36 hm5C_associated_SNPs_16985 0 0 4 DDX24 POSTAR2 ENCODE chr1:161138780-161138814
64251 chr1 161138804 161138804 1 + C T BLCA 161138790 + 161138770 161138810 41 GCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACT GCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTTAGCACT < 41bp 1 0.0523144967523149 1 0.11445289850235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138790 chr1:161138804 nonsynonymous SNV 0.887 5 35 hm5C_associated_SNPs_16986 0 0 4 DDX24 POSTAR2 ENCODE chr1:161138780-161138814
64251 chr1 161138804 161138804 1 + C T BLCA 161138791 + 161138771 161138811 41 CTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACTC CTTCCTCTGCAGGGCGGACCCCACAGCCAGACTTAGCACTC < 41bp 1 0.597705207061453 1 0.474503099918365 experiment 0.804589585877095 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138791 chr1:161138804 nonsynonymous SNV 0.887 5 34 hm5C_associated_SNPs_16987 0 0 4 DDX24 POSTAR2 ENCODE chr1:161138780-161138814
64251 chr1 161138804 161138804 1 + C T BLCA 161138792 + 161138772 161138812 41 TTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACTCA TTCCTCTGCAGGGCGGACCCCACAGCCAGACTTAGCACTCA < 41bp 1 0.399665007377147 1 0.263952076435089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138792 chr1:161138804 nonsynonymous SNV 0.887 5 33 hm5C_associated_SNPs_16988 0 0 4 DDX24 POSTAR2 ENCODE chr1:161138780-161138814
64251 chr9 131345045 131345045 1 + C G BLCA 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATGTGCAGC < 41bp 1 0.119016351123189 1 0.105246275663376 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345045 nonsynonymous SNV 0.873 4 35 hm5C_associated_SNPs_16989 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr9:131345025-131345046
64251 chr22 44547408 44547408 1 + G C BLCA 44547390 + 44547370 44547410 41 TCACTTTTGTGAACAAGCACCTGAACAAGCTGAATTTGGAG TCACTTTTGTGAACAAGCACCTGAACAAGCTGAATTTGCAG < 41bp 1 0.276795764496124 1 0.322241187095642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARVB ENSG00000188677 CDS Human protein_coding chr22:44547390 chr22:44547408 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_16990 0 0 1 DDX24 POSTAR2 ENCODE chr22:44547384-44547434
64251 chr18 77802162 77802162 1 + G A BLCA 77802159 + 77802139 77802179 41 CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT CTTTTGATGTCCCAGCAGACCCTAAGGAATGTGCCACCGAT < 41bp 1 0.278908449025967 1 0.0916878581047058 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBFA ENSG00000101546 CDS Human protein_coding chr18:77802159 chr18:77802162 synonymous SNV . 0 24 hm5C_associated_SNPs_16991 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77802152-77802190
64251 chr6 1390656 1390656 1 + C T BLCA 1390666 + 1390646 1390686 41 ACGAGTGCTTCATCAAGCTGCCTAAGGGCCTCGGGCGGCCC ACGAGTGCTTTATCAAGCTGCCTAAGGGCCTCGGGCGGCCC < 41bp 1 0.140841360038619 1 0.161543786525726 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390666 chr6:1390656 synonymous SNV . 0 11 hm5C_associated_SNPs_16992 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:1390652-1390671
64251 chr1 90473035 90473035 1 + C A BLCA 90473036 + 90473016 90473056 41 GGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACTC GGTGGTCGATTTGAGAGCTACTACCGGAATAGCCTTGACTC < 41bp 1 0.621151808474405 1 0.195272356271744 experiment 0.75769638305119 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473036 chr1:90473035 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_16993 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr6 30552103 30552103 1 + G C BLCA 30552122 + 30552102 30552142 41 AGAGAAGGTAGAGGAGATGGCGCAGGGGACACGGGCAAAGA ACAGAAGGTAGAGGAGATGGCGCAGGGGACACGGGCAAAGA < 41bp 1 0.47669860836772 1 0.589731693267822 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30552122 chr6:30552103 nonsynonymous SNV 0.993 2 2 hm5C_associated_SNPs_16994 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:30552041-30552103
64251 chr1 231401129 231401129 1 + G A BLCA 231401132 + 231401112 231401152 41 TGGCAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAA TGGCAATAAACTCTACTAGGCTGTATTCTCTGAATATGTAA < 41bp 1 0.498983735970667 1 0.0789030194282532 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401132 chr1:231401129 stopgain 1.000 1 18 hm5C_associated_SNPs_16995 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:231401102-231401148
64251 chr4 170611701 170611701 1 + G C BLCA 170611685 + 170611665 170611705 41 ACTATTTTCTTTTTAGGGTCCTGGTTCTTATATCATGAACT ACTATTTTCTTTTTAGGGTCCTGGTTCTTATATCATCAACT < 41bp 1 0.165873063428202 1 0.19366130232811 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170611685 chr4:170611701 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_16999 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:170611701-170611724
64251 chr14 35579793 35579793 1 - C T BLCA 35579783 - 35579763 35579803 41 ATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAA ATTAAGAGAGAAATCAAGAGCTGTCTTTCTACAAAGAAAAA < 41bp 1 0.214657750902045 1 0.105813801288605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP2R3C ENSG00000092020 CDS Human protein_coding chr14:35579783 chr14:35579793 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_17000 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr14:35579778-35579799
64251 chr6 3019730 3019730 1 + C G BLCA 3019713 + 3019693 3019733 41 TTCTTCCCCTGTGGCTTTAGCATGGCACATTACACTTCTGT TTCTTCCCCTGTGGCTTTAGCATGGCACATTACACTTGTGT < 41bp 1 0.258620657835223 1 0.529265105724335 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3019713 chr6:3019730 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_17001 0 0 9 FUS POSTAR2 GSE40653,GSM998875 chr6:3019720-3019740
64251 chr22 30403279 30403279 1 + A G BLCA 30403290 + 30403270 30403310 41 ACTTTCCCAATGGGGGAGACCTTTCTGACGTGGAGTTCGGT ACTTTCCCAGTGGGGGAGACCTTTCTGACGTGGAGTTCGGT < 41bp 1 0.0283965259761144 1 0.0838561058044434 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30403290 chr22:30403279 nonsynonymous SNV 0.977 1 10 hm5C_associated_SNPs_17002 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:30403269-30403293
64251 chr12 62783261 62783261 1 + A G BLCA 62783266 + 62783246 62783286 41 AGATCTTTGTACAGCATTGTCTGCTTTGTCAGGAATACCTG AGATCTTTGTACAGCGTTGTCTGCTTTGTCAGGAATACCTG < 41bp 1 0.538447502324599 1 0.231389969587326 experiment 0.923104995350803 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP15 ENSG00000135655 CDS Human protein_coding chr12:62783266 chr12:62783261 synonymous SNV . 0 16 hm5C_associated_SNPs_17003 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:62783233-62783263
64251 chr20 60878630 60878630 1 + G A BLCA 60878643 + 60878623 60878663 41 GGATGACGACCTCAGGCGCGCTCTTTCCAAGCCTGGTGCCA GGATGACAACCTCAGGCGCGCTCTTTCCAAGCCTGGTGCCA < 41bp 1 0.14044603413074 1 0.0158643424510956 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60878643 chr20:60878630 synonymous SNV . 0 8 hm5C_associated_SNPs_17004 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:60878630-60878652
64251 chr6 36442577 36442577 1 + G T BLCA 36442596 + 36442576 36442616 41 TGACTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA TTACTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA < 41bp 1 0.165243010158394 1 0.341740220785141 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36442596 chr6:36442577 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_17005 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:36442575-36442613
64251 chr11 64023902 64023902 1 + C T BLCA 64023887 + 64023867 64023907 41 TACCTGACGCTGGAGCAGCTCATGGACTTCATCAACCAGAA TACCTGACGCTGGAGCAGCTCATGGACTTCATCAATCAGAA < 41bp 1 0.362455088751447 1 0.256123930215836 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64023887 chr11:64023902 synonymous SNV . 0 36 hm5C_associated_SNPs_17006 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:64023891-64023908
64251 chr1 11080561 11080561 1 + C T BLCA 11080572 + 11080552 11080592 41 GAGGATGAGCTGCGGGAGTTCTTCTCTCAGTACGGGGATGT GAGGATGAGTTGCGGGAGTTCTTCTCTCAGTACGGGGATGT < 41bp 1 0.505021950828638 1 0.0469268560409546 experiment 0.989956098342725 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TARDBP ENSG00000120948 CDS Human protein_coding chr1:11080572 chr1:11080561 synonymous SNV . 0 10 hm5C_associated_SNPs_17007 0 0 35 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11080483-11080617
64251 chr1 45244268 45244268 1 + G C BLCA 45244255 + 45244235 45244275 41 TACTCTCTTGCAGCGTGCATCGCTTCAAGGCCGGGACAGTG TACTCTCTTGCAGCGTGCATCGCTTCAAGGCCGCGACAGTG < 41bp 1 0.404120817871312 1 0.531110644340515 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244255 chr1:45244268 nonsynonymous SNV 0.693 4 34 hm5C_associated_SNPs_17009 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45244248-45244286
64251 chr1 45244268 45244268 1 + G C BLCA 45244279 + 45244259 45244299 41 TCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCT TCAAGGCCGCGACAGTGTGGCCGAGCAGATGGCTATGTGCT < 41bp 1 0.297131290744635 1 0.294850140810013 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244279 chr1:45244268 nonsynonymous SNV 0.693 4 10 hm5C_associated_SNPs_17010 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45244248-45244286
64251 chr1 45244268 45244268 1 + G C BLCA 45244284 + 45244264 45244304 41 GCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGG GCCGCGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGG < 41bp 1 0.567846467515593 1 0.166399896144867 experiment 0.864307064968814 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244284 chr1:45244268 nonsynonymous SNV 0.693 4 5 hm5C_associated_SNPs_17011 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45244248-45244286
64251 chr14 102466434 102466434 1 + G T BLCA 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGT < 41bp 1 0.193756508985205 1 0.775957345962524 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466434 stopgain 0.885 1 41 hm5C_associated_SNPs_17013 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466392-102466437
64251 chr2 32724726 32724726 1 + G A BLCA 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAAAATCGGTTACATTTTTAGTGCACC < 41bp 1 0.0521114097622504 1 0.394257992506027 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724726 nonsynonymous SNV 0.996 4 17 hm5C_associated_SNPs_17017 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr12 131488773 131488773 1 + C T BLCA 131488788 + 131488768 131488808 41 TTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA TTCCTTCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA < 41bp 1 0.241389734034473 1 0.662658393383026 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488788 chr12:131488773 nonsynonymous SNV 0.011 1 6 hm5C_associated_SNPs_17018 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488773 131488773 1 + C T BLCA 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTTCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC < 41bp 1 0.0572642387867869 1 0.0586719214916229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488773 nonsynonymous SNV 0.011 1 3 hm5C_associated_SNPs_17019 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488773 131488773 1 + C T BLCA 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TTCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA < 41bp 1 0.202190144372529 1 0.359521090984344 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488773 nonsynonymous SNV 0.011 1 2 hm5C_associated_SNPs_17020 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488773 131488773 1 + C T BLCA 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG TCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG < 41bp 1 0.667538478998707 1 0.497197270393372 experiment 0.664923042002587 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488773 nonsynonymous SNV 0.011 1 1 hm5C_associated_SNPs_17021 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr4 524279 524279 1 + G A BLCA 524262 + 524242 524282 41 GTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGC GTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACAGGC < 41bp 1 0.295093091144555 1 0.192519515752792 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:524262 chr4:524279 synonymous SNV . 0 38 hm5C_associated_SNPs_17022 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:524231-524304
64251 chr19 52705266 52705266 1 + G C BLCA 52705272 + 52705252 52705292 41 AAAGGACCCGAAGTGAGCTTCTGCCTTTCCTTACAGGTAAC AAAGGACCCGAAGTCAGCTTCTGCCTTTCCTTACAGGTAAC < 41bp 1 0.323788321223653 1 0.379449307918549 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52705272 chr19:52705266 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_17023 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr19:52705248-52705280
64251 chr3 37090079 37090079 1 + C T BLCA 37090068 + 37090048 37090088 41 ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA ATGTGCCCCCTTTGGAGGGACTGCCTATCTTTATTCTTCGA < 41bp 1 0.39154332160956 1 0.0684399604797363 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090068 chr3:37090079 synonymous SNV . 0 32 hm5C_associated_SNPs_17024 0 0 1 SND1 POSTAR2 ENCODE chr3:37090048-37090100
64251 chr6 44218130 44218130 1 + G A BLCA 44218121 + 44218101 44218141 41 ATAAAGATGATGAAGAAAAACCCAAGATCGAAGATGTGGGT ATAAAGATGATGAAGAAAAACCCAAGATCAAAGATGTGGGT < 41bp 1 0.565754975441048 1 0.199476003646851 experiment 0.868490049117905 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218121 chr6:44218130 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_17025 0 0 36 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:44218109-44218130
64251 chr17 40997901 40997901 1 + C T BLCA 40997887 + 40997867 40997907 41 TATATTAGTGGGCAAAGGGGCAGTCCAGCTGCTTCCAGGGG TATATTAGTGGGCAAAGGGGCAGTCCAGCTGCTTTCAGGGG < 41bp 1 0.110653128821871 1 0.242184847593307 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997887 chr17:40997901 nonsynonymous SNV 0.001 0 35 hm5C_associated_SNPs_17026 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:40997869-40997901
64251 chr7 91981897 91981897 1 + C G BLCA 91981887 + 91981867 91981907 41 AGGGTCAAATACATCTGGATCTGATACACTCAGCTTCCCAT AGGGTCAAATACATCTGGATCTGATACACTGAGCTTCCCAT < 41bp 1 0.24688271451124 1 0.0382098257541656 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91981887 chr7:91981897 synonymous SNV . 0 31 hm5C_associated_SNPs_17027 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:91981889-91981914
64251 chr6 31936655 31936655 1 + G T BLCA 31936653 + 31936633 31936673 41 CCCTTTTTCTTGCAGGTGCTCCGAACCCTGGGTTATGTGGA CCCTTTTTCTTGCAGGTGCTCCTAACCCTGGGTTATGTGGA < 41bp 1 0.13126539469483 1 0.165636956691742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31936653 chr6:31936655 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_17029 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:31936645-31936669
64251 chr12 62784646 62784646 1 + G A BLCA 62784645 + 62784625 62784665 41 ATTTTTGATTTTACTTAAGCCGATATGTCAAAATATCTACT ATTTTTGATTTTACTTAAGCCAATATGTCAAAATATCTACT < 41bp 1 0.135407122840121 1 0.0540215969085693 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP15 ENSG00000135655 CDS Human protein_coding chr12:62784645 chr12:62784646 nonsynonymous SNV 0.934 3 22 hm5C_associated_SNPs_17030 0 0 3 DDX24 POSTAR2 ENCODE chr12:62784641-62784761
64251 chr2 74077584 74077584 1 + G C BLCA 74077580 + 74077560 74077600 41 GATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCAT GATTACTGCAACACAGAGAACGAACAAGAACTTTTCCTCAT < 41bp 1 0.347650460121457 1 0.195281475782394 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077580 chr2:74077584 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_17031 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74077547-74077615
64251 chr20 47615021 47615021 1 + G C BLCA 47615033 + 47615013 47615053 41 TGGCATGTGATTGGAGATCACTTCAATAAGGTAACTCTTCA TGGCATGTCATTGGAGATCACTTCAATAAGGTAACTCTTCA < 41bp 1 0.277445170174484 1 0.644370138645172 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47615033 chr20:47615021 synonymous SNV . 0 9 hm5C_associated_SNPs_17032 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr20:47615009-47615028
64251 chr16 2806578 2806578 1 + C G BLCA 2806567 + 2806547 2806587 41 AGCGCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAG AGCGCAAGCGGCGCGTCGAGCTGCGATGCCTGGAGCTGGAG < 41bp 1 0.650908431860775 1 0.291789889335632 experiment 0.698183136278451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806567 chr16:2806578 synonymous SNV . 0 32 hm5C_associated_SNPs_17033 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr16 2806578 2806578 1 + C G BLCA 2806570 + 2806550 2806590 41 GCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAGGAG GCAAGCGGCGCGTCGAGCTGCGATGCCTGGAGCTGGAGGAG < 41bp 1 0.227687667211477 1 0.375866889953613 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806570 chr16:2806578 synonymous SNV . 0 29 hm5C_associated_SNPs_17034 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr16 2806578 2806578 1 + C G BLCA 2806582 + 2806562 2806602 41 TCGAGCTGCGATGCCTCGAGCTGGAGGAGATGATGGAAGAG TCGAGCTGCGATGCCTGGAGCTGGAGGAGATGATGGAAGAG < 41bp 1 0.771010061588925 1 0.527713060379028 experiment 0.457979876822149 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806582 chr16:2806578 synonymous SNV . 0 17 hm5C_associated_SNPs_17035 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr15 68583478 68583478 1 + G A BLCA 68583485 + 68583465 68583505 41 AAACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGA AAACTCAAATGAAAATGAGTCTCAAGTGCCTGGCTGCCCGA < 41bp 1 0.772340023470468 1 0.850128293037415 experiment 0.455319953059064 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583485 chr15:68583478 synonymous SNV . 0 14 hm5C_associated_SNPs_17036 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:68583393-68583484
64251 chr15 68583478 68583478 1 + G A BLCA 68583487 + 68583467 68583507 41 ACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGC ACTCAAATGAAAATGAGTCTCAAGTGCCTGGCTGCCCGAGC < 41bp 1 0.646853687802146 1 0.832869052886963 experiment 0.706292624395708 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583487 chr15:68583478 synonymous SNV . 0 12 hm5C_associated_SNPs_17037 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:68583393-68583484
64251 chr15 68583478 68583478 1 + G A BLCA 68583493 + 68583473 68583513 41 ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCG ATGAAAATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCG < 41bp 1 0.212908637222627 1 0.0921900570392609 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583493 chr15:68583478 synonymous SNV . 0 6 hm5C_associated_SNPs_17038 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:68583393-68583484
64251 chr15 68583478 68583478 1 + G A BLCA 68583494 + 68583474 68583514 41 TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGG TGAAAATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGG < 41bp 1 0.44006584910212 1 0.468883752822876 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583494 chr15:68583478 synonymous SNV . 0 5 hm5C_associated_SNPs_17039 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:68583393-68583484
64251 chr6 42975953 42975953 1 + C T BLCA 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTACGAGATGGAGCATCACAACGGGATTGCTGAG < 41bp 1 0.306978526167837 1 0.0847899615764618 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975953 nonsynonymous SNV 0.946 4 16 hm5C_associated_SNPs_17040 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:42975932-42975953
64251 chr22 38352811 38352811 1 + G C BLCA 38352823 + 38352803 38352843 41 ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCC ATGTGGAGCAGGATGAAGGGCTAGATGACTTGGAGAATGCC < 41bp 1 0.693849122102234 1 0.549618124961853 experiment 0.612301755795532 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352823 chr22:38352811 nonsynonymous SNV 0.998 1 9 hm5C_associated_SNPs_17041 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr22 38352811 38352811 1 + G C BLCA 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT CAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT < 41bp 1 0.476397475433558 1 0.173874467611313 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352811 nonsynonymous SNV 0.998 1 1 hm5C_associated_SNPs_17042 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr9 135929290 135929290 1 + C G BLCA 135929296 + 135929276 135929316 41 ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCCGTTGT ATGCCAAGATTTATGAAGTCCTCGATTTCCGAATCCGTTGT < 41bp 1 0.759878932317208 1 0.922631978988647 experiment 0.480242135365584 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929296 chr9:135929290 nonsynonymous SNV 0.999 3 15 hm5C_associated_SNPs_17043 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr9:135929280-135929300
64251 chr11 764330 764330 1 + C G BLCA 764334 + 764314 764354 41 CACCTGGATGAGAAGTCTTTCCGTTGGTTGCACAACGAGGA CACCTGGATGAGAAGTGTTTCCGTTGGTTGCACAACGAGGA < 41bp 1 0.207982109440549 1 0.486180782318115 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764334 chr11:764330 nonsynonymous SNV 0.981 2 17 hm5C_associated_SNPs_17060 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:764301-764385
64251 chr11 608431 608431 1 + G T BLCA 608425 + 608405 608445 41 AGTCGTGGAGCTCAGGCCCCCTTCCCGGTCCCGCTCCACAT AGTCGTGGAGCTCAGGCCCCCTTCCCTGTCCCGCTCCACAT < 41bp 1 0.163256754207321 1 0.158232182264328 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608425 chr11:608431 nonsynonymous SNV 0.601 0 27 hm5C_associated_SNPs_17061 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:608407-608445
64251 chr1 151006388 151006388 1 + C T BLCA 151006407 + 151006387 151006427 41 TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC TTTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC < 41bp 1 0.144940939644821 1 0.0630764365196228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006407 chr1:151006388 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_17062 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151006384-151006410
64251 chr17 2278990 2278990 1 + G A BLCA 2278978 + 2278958 2278998 41 ACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAGATGAGGGG ACTCCGTGGCCTCGGGCATCCAGTCAAGCCTAAATGAGGGG < 41bp 1 0.149979605419219 1 0.58681321144104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278978 chr17:2278990 nonsynonymous SNV 0.996 4 33 hm5C_associated_SNPs_17063 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:2278989-2278990
64251 chr16 28884772 28884772 1 + G A BLCA 28884771 + 28884751 28884791 41 TTACCATTCCTATCCAGAACCGACCACCTCCCATGACCCAC TTACCATTCCTATCCAGAACCAACCACCTCCCATGACCCAC < 41bp 1 0.21187568551673 1 0.507961094379425 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884771 chr16:28884772 nonsynonymous SNV 0.989 1 22 hm5C_associated_SNPs_17064 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr16:28884741-28884773
64251 chr16 28884772 28884772 1 + G A BLCA 28884777 + 28884757 28884797 41 TTCCTATCCAGAACCGACCACCTCCCATGACCCACCCCAGC TTCCTATCCAGAACCAACCACCTCCCATGACCCACCCCAGC < 41bp 1 0.0208993610687418 1 0.216281920671463 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884777 chr16:28884772 nonsynonymous SNV 0.989 1 16 hm5C_associated_SNPs_17065 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr16:28884741-28884773
64251 chr9 134026017 134026017 1 + G C BLCA 134026009 + 134025989 134026029 41 TGTGGCTTCTACAGATTGCACACTTTCAGAAGGAGTTGGAA TGTGGCTTCTACAGATTGCACACTTTCACAAGGAGTTGGAA < 41bp 1 0.0863240073114034 1 0.0370836555957794 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134026009 chr9:134026017 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_17066 0 0 10 AARS POSTAR2 ENCODE chr9:134026001-134026063
64251 chr16 2011251 2011251 1 + C T BLCA 2011268 + 2011248 2011288 41 CATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG CATTATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG < 41bp 1 0.614091563100916 1 0.460699200630188 experiment 0.771816873798168 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011268 chr16:2011251 synonymous SNV . 0 4 hm5C_associated_SNPs_17068 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr16 2011251 2011251 1 + C T BLCA 2011269 + 2011249 2011289 41 ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA ATTATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA < 41bp 1 0.638645775506193 1 0.486008614301682 experiment 0.722708448987615 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011269 chr16:2011251 synonymous SNV . 0 3 hm5C_associated_SNPs_17069 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr1 180034352 180034352 1 + G A BLCA 180034360 + 180034340 180034380 41 ATCTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA ATCTCCAGCAGTAAAACTAGCAGCATTATGCAGAAACTGAA < 41bp 1 0.496560167266964 1 0.0972406566143036 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180034360 chr1:180034352 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_17071 0 0 2 ZNF622 POSTAR2 ENCODE chr1:180034253-180034361
64251 chr21 34635155 34635155 1 + G C BLCA 34635140 + 34635120 34635160 41 GGCCATTTCCTAACCTGCCACCGTTGGAAGCCATGGATATG GGCCATTTCCTAACCTGCCACCGTTGGAAGCCATGCATATG < 41bp 1 0.0365743431371736 1 0.0381505787372589 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635140 chr21:34635155 nonsynonymous SNV 0.004 1 36 hm5C_associated_SNPs_17072 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:34635155-34635181
64251 chr9 106876995 106876995 1 + G C BLCA 106876976 + 106876956 106876996 41 AACTTTTGTATTTCAGGGATCCAGAGAAGAACTGGAATAGA AACTTTTGTATTTCAGGGATCCAGAGAAGAACTGGAATACA < 41bp 1 0.308608857038698 1 0.645601630210876 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106876976 chr9:106876995 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_17073 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr9:106876973-106876995
64251 chr2 152276738 152276738 1 + G C BLCA 152276742 + 152276722 152276762 41 AATTCAAATGGGAGAAGAGGCAGTGAGGTGGGCAAAACTGG AATTCAAATGGGAGAACAGGCAGTGAGGTGGGCAAAACTGG < 41bp 1 0.318278320844317 1 0.174992352724075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152276742 chr2:152276738 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_17074 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:152276720-152276740
64251 chr2 238664806 238664806 1 + G A BLCA 238664803 + 238664783 238664823 41 TTTGCTGAAGTCAAGGAGGCCCTGAAGCAAAGAGAGGAAAT TTTGCTGAAGTCAAGGAGGCCCTAAAGCAAAGAGAGGAAAT < 41bp 1 0.0623307555922703 1 0.114193916320801 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238664803 chr2:238664806 synonymous SNV . 0 24 hm5C_associated_SNPs_17075 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:238664782-238664810
64251 chr9 91963078 91963078 1 + G C BLCA 91963073 + 91963053 91963093 41 AGCTTTTACCAGTGATGACACACAAGATGGAGAGAGTGGTG AGCTTTTACCAGTGATGACACACAACATGGAGAGAGTGGTG < 41bp 1 0.725793232286136 1 0.165505617856979 experiment 0.548413535427729 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91963073 chr9:91963078 nonsynonymous SNV 0.044 3 26 hm5C_associated_SNPs_17076 0 0 8 BUD13 POSTAR2 ENCODE chr9:91963075-91963140
64251 chr4 57876570 57876570 1 + G A BLCA 57876563 + 57876543 57876583 41 CTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCT CTTTTGCGTCTACTCTTTCTCACCTGCATCGTTTAAATTCT < 41bp 1 0.58174052751529 1 0.407169997692108 experiment 0.836518944969421 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57876563 chr4:57876570 nonsynonymous SNV 0.998 5 28 hm5C_associated_SNPs_17077 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:57876532-57876584
64251 chr6 64394374 64394374 1 + C A BLCA 64394368 + 64394348 64394388 41 ATCCGGGAGAAATAGATGTGCCATCTCATGAATTAAATTGT ATCCGGGAGAAATAGATGTGCCATCTAATGAATTAAATTGT < 41bp 1 0.0185028000393018 1 0.102861166000366 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64394368 chr6:64394374 nonsynonymous SNV 0.998 0 27 hm5C_associated_SNPs_17079 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64394088-64394691
64251 chr4 3174751 3174751 1 + C A BLCA 3174757 + 3174737 3174777 41 AGTGTGAGGCCAGGCTTGTACCACTACTGCTTCATGGCCCC AGTGTGAGGCCAGGATTGTACCACTACTGCTTCATGGCCCC < 41bp 1 0.163003741836282 1 0.285094141960144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3174757 chr4:3174751 synonymous SNV . 0 15 hm5C_associated_SNPs_17080 0 0 2 FMR1 POSTAR2 ENCODE chr4:3174719-3174821
64251 chrX 41201840 41201840 1 + G C BLCA 41201835 + 41201815 41201855 41 AAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATC AAATTTGAACGTGGTGGAAACAGTCCCTGGTGTGACAAATC < 41bp 1 0.194521891134349 1 0.24224054813385 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201835 chrX:41201840 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_17081 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201840 41201840 1 + G C BLCA 41201839 + 41201819 41201859 41 TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT TTGAACGTGGTGGAAACAGTCCCTGGTGTGACAAATCAGAT < 41bp 1 0.392736679162534 1 0.118065804243088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201839 chrX:41201840 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_17082 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201840 41201840 1 + G C BLCA 41201850 + 41201830 41201870 41 GGAAACAGTCGCTGGTGTGACAAATCAGATGAAGATGATTG GGAAACAGTCCCTGGTGTGACAAATCAGATGAAGATGATTG < 41bp 1 0.269617473306172 1 0.413865804672241 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201850 chrX:41201840 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_17083 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201840 41201840 1 + G C BLCA 41201855 + 41201835 41201875 41 CAGTCGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAA CAGTCCCTGGTGTGACAAATCAGATGAAGATGATTGGTCAA < 41bp 1 0.707688064106886 1 0.589717984199524 experiment 0.584623871786228 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201855 chrX:41201840 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_17084 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr7 128846180 128846180 1 + C T BLCA 128846171 + 128846151 128846191 41 CACCTGCTCACCTGGTCACTCCCCTTTGTCCTCACTGTGGC CACCTGCTCACCTGGTCACTCCCCTTTGTTCTCACTGTGGC < 41bp 1 0.196287980593114 1 0.0816692411899567 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMO ENSG00000128602 CDS Human protein_coding chr7:128846171 chr7:128846180 synonymous SNV . 0 30 hm5C_associated_SNPs_17085 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:128846178-128846199
64251 chr7 100151733 100151733 1 + C T BLCA 100151721 + 100151701 100151741 41 TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGGAC TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCATGCTCGGAC < 41bp 1 0.0426070517715215 1 0.0263087153434753 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100151721 chr7:100151733 synonymous SNV . 0 33 hm5C_associated_SNPs_17086 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100151718-100151749
64251 chr1 220928391 220928391 1 + C T BLCA 220928383 + 220928363 220928403 41 TCATTTATGAGAATAACTGCCTGATCTTCAGGGCTCCAGAC TCATTTATGAGAATAACTGCCTGATCTTTAGGGCTCCAGAC < 41bp 1 0.434324503207351 1 0.0650050044059753 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928383 chr1:220928391 synonymous SNV . 0 29 hm5C_associated_SNPs_17089 0 0 2 GRWD1 POSTAR2 ENCODE chr1:220928335-220928478
64251 chr1 220928391 220928391 1 + C T BLCA 220928388 + 220928368 220928408 41 TATGAGAATAACTGCCTGATCTTCAGGGCTCCAGACATGGA TATGAGAATAACTGCCTGATCTTTAGGGCTCCAGACATGGA < 41bp 1 0.5123775431495 1 0.133397251367569 experiment 0.975244913700999 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928388 chr1:220928391 synonymous SNV . 0 24 hm5C_associated_SNPs_17090 0 0 2 GRWD1 POSTAR2 ENCODE chr1:220928335-220928478
64251 chr22 50861948 50861948 1 + C T BLCA 50861963 + 50861943 50861983 41 CCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCAC CCCGTTTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCAC < 41bp 1 0.489670938709031 1 0.203811168670654 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50861963 chr22:50861948 synonymous SNV . 0 6 hm5C_associated_SNPs_17091 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50861933-50861956
64251 chrX 153608140 153608140 1 + C G BLCA 153608138 + 153608118 153608158 41 CCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA CCCAGCTCGTCCGCCGCCTCCTGTTATAGCTTCTCTGGTGA < 41bp 1 0.481468983227885 1 0.118152350187302 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608138 chrX:153608140 nonsynonymous SNV 0.023 2 23 hm5C_associated_SNPs_17092 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr20 47896941 47896941 1 + G A BLCA 47896942 + 47896922 47896962 41 GCCAGTTTCTGTCTGATATGCCAGCTTGAGCAGCTCCTTTG GCCAGTTTCTGTCTGATATACCAGCTTGAGCAGCTCCTTTG < 41bp 1 0.251809932162601 1 0.0702066421508789 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896942 chr20:47896941 . . 0 20 hm5C_associated_SNPs_17094 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:47896835-47896947
64251 chr17 40646475 40646475 1 + A G BLCA 40646461 + 40646441 40646481 41 TGGATGGTACTGAGGGAGAGCCGGATCCTTTCCCAGAAGAA TGGATGGTACTGAGGGAGAGCCGGATCCTTTCCCGGAAGAA < 41bp 1 0.504101486532507 1 0.426275432109833 experiment 0.991797026934986 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40646461 chr17:40646475 nonsynonymous SNV 0.999 2 35 hm5C_associated_SNPs_17095 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr17:40646368-40646476
64251 chr14 65194411 65194411 1 + C G BLCA 65194430 + 65194410 65194450 41 TCTACCACCTCCTCGTCGGGCTCCTCCTGTGACAGTCGCAG TGTACCACCTCCTCGTCGGGCTCCTCCTGTGACAGTCGCAG < 41bp 1 0.0972216542078884 1 0.111396163702011 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65194430 chr14:65194411 nonsynonymous SNV 0.020 3 2 hm5C_associated_SNPs_17096 0 0 3 BUD13 POSTAR2 ENCODE chr14:65194350-65194423
64251 chr2 135883809 135883809 1 + G A BLCA 135883796 + 135883776 135883816 41 CCTCATCTGACCGAAGGGATCATTGTGGATAATGATGTTTA CCTCATCTGACCGAAGGGATCATTGTGGATAATAATGTTTA < 41bp 1 0.137951268553952 1 0.0823842585086823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135883796 chr2:135883809 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_17097 0 0 2 PRPF8 POSTAR2 ENCODE chr2:135883774-135883850
64251 chr10 17277345 17277345 1 + G C BLCA 17277353 + 17277333 17277373 41 GCCCTTGACATTGAGATTGCCACCTACAGGAAGCTGCTGGA GCCCTTGACATTCAGATTGCCACCTACAGGAAGCTGCTGGA < 41bp 1 0.345082666246274 1 0.17715921998024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277353 chr10:17277345 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_17098 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17277301-17277370
64251 chr10 17277345 17277345 1 + G C BLCA 17277356 + 17277336 17277376 41 CTTGACATTGAGATTGCCACCTACAGGAAGCTGCTGGAAGG CTTGACATTCAGATTGCCACCTACAGGAAGCTGCTGGAAGG < 41bp 1 0.760548568791696 1 0.683423578739166 experiment 0.478902862416609 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277356 chr10:17277345 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_17099 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17277301-17277370
64251 chr20 47605103 47605103 1 + G A BLCA 47605120 + 47605100 47605140 41 GAAGAGTATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA GAAAAGTATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA < 41bp 1 0.209718563365088 1 0.159062772989273 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47605120 chr20:47605103 nonsynonymous SNV 0.983 3 4 hm5C_associated_SNPs_17100 0 0 1 BUD13 POSTAR2 ENCODE chr20:47605096-47605119
64251 chr12 989996 989996 1 + C T BLCA 989989 + 989969 990009 41 ATTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG ATTCTACAGTCCTATCCCCTCCCATGCTGACAGAAGTACTG < 41bp 1 0.115781065041841 1 0.264963328838348 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:989989 chr12:989996 nonsynonymous SNV 0.995 3 28 hm5C_associated_SNPs_17101 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:989977-990008
64251 chr9 33313681 33313681 1 + C T BLCA 33313662 + 33313642 33313682 41 GTCTTTACAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCA GTCTTTACAGGCACACAGTTCGCTGTGGTCAGGCTGTCTTA < 41bp 1 0.45104910767639 1 0.409150034189224 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33313662 chr9:33313681 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_17102 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:33313661-33313687
64251 chr6 44221299 44221299 1 + C T BLCA 44221288 + 44221268 44221308 41 CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT CAGTTCCTGATGAGATCCCCCCTCTCGAGGGTGATGAGGAT < 41bp 1 0.0518558921969372 1 0.0597387552261353 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221288 chr6:44221299 synonymous SNV . 0 32 hm5C_associated_SNPs_17105 0 0 47 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44221299 44221299 1 + C T BLCA 44221289 + 44221269 44221309 41 AGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG AGTTCCTGATGAGATCCCCCCTCTCGAGGGTGATGAGGATG < 41bp 1 0.222625194867409 1 0.182693898677826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221289 chr6:44221299 synonymous SNV . 0 31 hm5C_associated_SNPs_17106 0 0 47 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr22 38201996 38201996 1 + A C BLCA 38202011 + 38201991 38202031 41 AGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCC AGAAGCAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCC < 41bp 1 0.508413205911354 1 0.41336265206337 experiment 0.983173588177292 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient H1F0 ENSG00000189060 CDS Human protein_coding chr22:38202011 chr22:38201996 nonsynonymous SNV 0.998 0 6 hm5C_associated_SNPs_17108 0 0 3 GRWD1 POSTAR2 ENCODE chr22:38201971-38202022
64251 chrX 123224564 123224564 1 + G A BLCA 123224558 + 123224538 123224578 41 AGATTACGGCCTGAGGATAGCTTCATGAGTGTTTATCCAAT AGATTACGGCCTGAGGATAGCTTCATAAGTGTTTATCCAAT < 41bp 1 0.476227110201939 1 0.141875803470612 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123224558 chrX:123224564 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_17109 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:123224523-123224589
64251 chr2 241513629 241513629 1 + C T BLCA 241513620 + 241513600 241513640 41 ATCTCCTCCATCCTGGAGAGCGATGAGTTCCTGGTCATCGA ATCTCCTCCATCCTGGAGAGCGATGAGTTTCTGGTCATCGA < 41bp 1 0.163828562249076 1 0.065881609916687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241513620 chr2:241513629 synonymous SNV . 0 30 hm5C_associated_SNPs_17110 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:241513608-241513632
64251 chr16 50655557 50655557 1 + G A BLCA 50655547 + 50655527 50655567 41 GAGAAGACTGACGGGCTGGGCAGCGGAGATGAGAAGAAGAT GAGAAGACTGACGGGCTGGGCAGCGGAGATAAGAAGAAGAT < 41bp 1 0.517512744226114 1 0.556674003601074 experiment 0.964974511547771 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NKD1 ENSG00000140807 CDS Human protein_coding chr16:50655547 chr16:50655557 nonsynonymous SNV 0.845 2 31 hm5C_associated_SNPs_17112 0 0 7 BUD13 POSTAR2 ENCODE chr16:50655461-50655558
64251 chr14 56078992 56078992 1 + G A BLCA 56078994 + 56078974 56079014 41 GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGA GGAAACCTCCATGAATCCAACTCTGAGAGTGTACCTCGAGA < 41bp 1 0.278102588001319 1 0.0774827301502228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56078994 chr14:56078992 nonsynonymous SNV 0.997 4 19 hm5C_associated_SNPs_17114 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr14:56078972-56078993
64251 chr20 57466824 57466824 1 + G A BLCA 57466815 + 57466795 57466835 41 GGAACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCG GGAACAGTAAGACCGAGGACCAGCGCAACAAGGAGAAGGCG < 41bp 1 0.482753816134225 1 0.75343906879425 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466815 chr20:57466824 nonsynonymous SNV 0.995 1 30 hm5C_associated_SNPs_17115 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57466824 57466824 1 + G A BLCA 57466818 + 57466798 57466838 41 ACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCGCAG ACAGTAAGACCGAGGACCAGCGCAACAAGGAGAAGGCGCAG < 41bp 1 0.644035116866341 1 0.70184326171875 experiment 0.711929766267317 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466818 chr20:57466824 nonsynonymous SNV 0.995 1 27 hm5C_associated_SNPs_17116 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr9 127101893 127101893 1 + C T BLCA 127101884 + 127101864 127101904 41 TACATGTCACCGGAGAGGATCCATGAGAACGGCTACAACTT TACATGTCACCGGAGAGGATCCATGAGAATGGCTACAACTT < 41bp 1 0.0844329715483351 1 0.0287351310253143 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NEK6 ENSG00000119408 CDS Human protein_coding chr9:127101884 chr9:127101893 synonymous SNV . 0 30 hm5C_associated_SNPs_17117 0 0 1 GRWD1 POSTAR2 ENCODE chr9:127101889-127101948
64251 chr15 89172609 89172609 1 + G A BLCA 89172606 + 89172586 89172626 41 CCCGGCCTCCACACCCGGGCCCGGGTCTCTCTAAAGGACCT CCCGGCCTCCACACCCGGGCCCGAGTCTCTCTAAAGGACCT < 41bp 1 0.189761714067791 1 0.121757656335831 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89172606 chr15:89172609 synonymous SNV . 0 24 hm5C_associated_SNPs_17120 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr15:89172570-89172618
64251 chrX 73043047 73043047 1 - C A BLCA 73043029 - 73043009 73043049 41 AGGAGACTGATAAAAGGGCTCAGGGTTTGTTCTTTAATTCA AGTAGACTGATAAAAGGGCTCAGGGTTTGTTCTTTAATTCA < 41bp 1 0.406323669809939 1 0.506540358066559 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043029 chrX:73043047 . . 0 3 hm5C_associated_SNPs_17121 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr1 145518173 145518173 1 + A G BLCA 145518156 + 145518136 145518176 41 GTTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAATCG GTTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAGTCG < 41bp 1 0.228927719353061 1 0.0464172661304474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145518156 chr1:145518173 nonsynonymous SNV . 0 38 hm5C_associated_SNPs_17123 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145518148-145518185
64251 chr3 47447452 47447452 1 + C T BLCA 47447468 + 47447448 47447488 41 CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC CCTTTGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC < 41bp 1 0.0685493337336398 1 0.0189373195171356 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447468 chr3:47447452 synonymous SNV . 0 5 hm5C_associated_SNPs_17124 0 0 1 FMR1 POSTAR2 ENCODE chr3:47447434-47447483
64251 chr19 2271908 2271908 1 + A G BLCA 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTCTGCATCGAGATCCCGGGCGGCGCGCTGCCCGAG < 41bp 1 0.747699047860905 1 0.908930063247681 experiment 0.50460190427819 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271908 nonsynonymous SNV 0.956 3 10 hm5C_associated_SNPs_17125 0 0 29 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:2271780-2271920
64251 chr4 44680684 44680684 1 + C T BLCA 44680704 + 44680684 44680724 41 CGCGCCACGAGCCACTGGGGCCGCGCTTCTGGTGGCCCCGG TGCGCCACGAGCCACTGGGGCCGCGCTTCTGGTGGCCCCGG < 41bp 1 0.703034344643521 1 0.304416596889496 experiment 0.593931310712958 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GUF1 ENSG00000151806 CDS Human protein_coding chr4:44680704 chr4:44680684 synonymous SNV . 0 1 hm5C_associated_SNPs_17126 0 0 2 DDX3X POSTAR2 ENCODE chr4:44680632-44680689
64251 chr1 206653236 206653236 1 + G A BLCA 206653240 + 206653220 206653260 41 GGACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGCGG GGACGTCCCCAAGTTCATCCCCAAAGTGGACCTGCAGGCGG < 41bp 1 0.481202933295624 1 0.387946605682373 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IKBKE ENSG00000143466 CDS Human other chr1:206653240 chr1:206653236 nonsynonymous SNV 0.874 0 17 hm5C_associated_SNPs_17127 0 0 1 PPIG POSTAR2 ENCODE chr1:206653233-206653278
64251 chr5 149758896 149758896 1 + G A BLCA 149758892 + 149758872 149758912 41 CGTGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGG CGTGGCTACAGCAGCTCAGGCCCAAACAGGGCCAGAGGAGG < 41bp 1 0.136543402182519 1 0.39550369977951 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758892 chr5:149758896 synonymous SNV . 0 25 hm5C_associated_SNPs_17128 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr5 149758896 149758896 1 + G A BLCA 149758893 + 149758873 149758913 41 GTGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGA GTGGCTACAGCAGCTCAGGCCCAAACAGGGCCAGAGGAGGA < 41bp 1 0.0950905866083438 1 0.254747807979584 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758893 chr5:149758896 synonymous SNV . 0 24 hm5C_associated_SNPs_17129 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr5 149758896 149758896 1 + G A BLCA 149758894 + 149758874 149758914 41 TGGCTACAGCAGCTCAGGCCCAGACAGGGCCAGAGGAGGAC TGGCTACAGCAGCTCAGGCCCAAACAGGGCCAGAGGAGGAC < 41bp 1 0.0800589172248114 1 0.303800821304321 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758894 chr5:149758896 synonymous SNV . 0 23 hm5C_associated_SNPs_17130 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr5 149758896 149758896 1 + G A BLCA 149758903 + 149758883 149758923 41 CAGCTCAGGCCCAGACAGGGCCAGAGGAGGACTCAGGGAGC CAGCTCAGGCCCAAACAGGGCCAGAGGAGGACTCAGGGAGC < 41bp 1 0.289723173510097 1 0.541335105895996 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758903 chr5:149758896 synonymous SNV . 0 14 hm5C_associated_SNPs_17131 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr5 149758896 149758896 1 + G A BLCA 149758914 + 149758894 149758934 41 CAGACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAGGA CAAACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAGGA < 41bp 1 0.500976300045705 1 0.5937260389328 experiment 0.998047399908589 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758914 chr5:149758896 synonymous SNV . 0 3 hm5C_associated_SNPs_17132 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr5 149758896 149758896 1 + G A BLCA 149758916 + 149758896 149758936 41 GACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAGGAGT AACAGGGCCAGAGGAGGACTCAGGGAGCAGTGAGGAGGAGT < 41bp 1 0.730465431260613 1 0.938269913196564 experiment 0.539069137478773 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758916 chr5:149758896 synonymous SNV . 0 1 hm5C_associated_SNPs_17133 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758880-149758920
64251 chr11 65055264 65055264 1 + G A BLCA 65055284 + 65055264 65055304 41 GACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG AACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG < 41bp 1 0.111400751825912 1 0.160529851913452 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65055284 chr11:65055264 nonsynonymous SNV 0.829 4 1 hm5C_associated_SNPs_17134 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr11:65055264-65055289
64251 chr22 38021890 38021890 1 + G A BLCA 38021903 + 38021883 38021923 41 CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG CCCTGGCAAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG < 41bp 1 0.631578930452668 1 0.067538857460022 experiment 0.736842139094665 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021903 chr22:38021890 nonsynonymous SNV 0.004 0 8 hm5C_associated_SNPs_17135 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38021837-38021905
64251 chr6 7578018 7578018 1 + G C BLCA 7578027 + 7578007 7578047 41 TGCAGGATTATGAGCTCCAGCTGGCCTCATACACCTCAGGA TGCAGGATTATCAGCTCCAGCTGGCCTCATACACCTCAGGA < 41bp 1 0.234624771714775 1 0.553164958953857 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DSP ENSG00000096696 CDS Human protein_coding chr6:7578027 chr6:7578018 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_17136 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:7578012-7578045
64251 chr20 55049784 55049784 1 + A T BLCA 55049773 + 55049753 55049793 41 GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT GTCATTGAATTTCTCTTGGACAAATCTGCAGTAAAGGCTCT < 41bp 1 0.138341324472692 1 0.20772659778595 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049773 chr20:55049784 nonsynonymous SNV 0.999 2 32 hm5C_associated_SNPs_17137 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55049742-55049808
64251 chr20 55049783 55049783 1 + G A BLCA 55049773 + 55049753 55049793 41 GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT GTCATTGAATTTCTCTTGGACAAATCTGCAAAAAAGGCTCT < 41bp 1 0.138337384988764 1 0.158275634050369 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049773 chr20:55049783 nonsynonymous SNV 0.997 1 31 hm5C_associated_SNPs_17138 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55049742-55049808
64251 chr11 43380533 43380533 1 + G C BLCA 43380532 + 43380512 43380552 41 CGGCAGTAGGGGTTCGTGGCCGGTACGAGCTGCCGCCTTGC CGGCAGTAGGGGTTCGTGGCCCGTACGAGCTGCCGCCTTGC < 41bp 1 0.678531665695092 1 0.12184864282608 experiment 0.642936668609815 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43380532 chr11:43380533 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_17139 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:43380504-43380533
64251 chr3 184021746 184021746 1 + T C BLCA 184021744 + 184021724 184021764 41 GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTGTGGCATAGTG GCTCTTTGTAGTCAGGAGCTCTCCTTGCCTGTGGCATAGTG < 41bp 1 0.39542540178574 1 0.476438522338867 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021744 chr3:184021746 synonymous SNV . 0 23 hm5C_associated_SNPs_17140 0 0 17 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184021720-184021789
64251 chr9 78506220 78506220 1 + C G BLCA 78506235 + 78506215 78506255 41 GCAGTCAAAATCGCCGGGGGCTTCCCGGAGGCCAACCGTAT GCAGTGAAAATCGCCGGGGGCTTCCCGGAGGCCAACCGTAT < 41bp 1 0.0590378842348407 1 0.0631242990493774 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78506235 chr9:78506220 synonymous SNV . 0 6 hm5C_associated_SNPs_17146 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:78506219-78506220
64251 chr16 70564782 70564782 1 + G C BLCA 70564775 + 70564755 70564795 41 CATGTAGTTGGAGTAGATGTCGGATTTGAAAATCCAATGTT CATGTAGTTGGAGTAGATGTCGGATTTCAAAATCCAATGTT < 41bp 1 0.457049664809952 1 0.7046138048172 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70564775 chr16:70564782 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_17147 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70564708-70564825
64251 chr1 154317147 154317147 1 + C T BLCA 154317162 + 154317142 154317182 41 TCATCCCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA TCATCTCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA < 41bp 1 0.360219066408147 1 0.415726780891418 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317162 chr1:154317147 synonymous SNV . 0 6 hm5C_associated_SNPs_17148 0 0 1 DDX24 POSTAR2 ENCODE chr1:154317132-154317172
64251 chr11 6962820 6962820 1 + C G BLCA 6962809 + 6962789 6962829 41 TCATCTTCCTCAGATATGCCCTGCAAGGACTCTGCCCTGCA TCATCTTCCTCAGATATGCCCTGCAAGGACTGTGCCCTGCA < 41bp 1 0.722382072478837 1 0.407717406749725 experiment 0.555235855042326 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF215 ENSG00000149054 CDS Human protein_coding chr11:6962809 chr11:6962820 nonsynonymous SNV 0.213 3 32 hm5C_associated_SNPs_17149 0 0 1 UCHL5 POSTAR2 ENCODE chr11:6962798-6962849
64251 chr18 13056643 13056643 1 + G A BLCA 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTATTGGTACAAACTGTGGAATTGAACCAT < 41bp 1 0.0936724991858668 1 0.259611248970032 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056643 nonsynonymous SNV 0.001 0 14 hm5C_associated_SNPs_17152 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr18 13056643 13056643 1 + G A BLCA 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTATTGGTACAAACTGTGGAATTGAACCATGGGA < 41bp 1 0.281822346704594 1 0.185627490282059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056643 nonsynonymous SNV 0.001 0 10 hm5C_associated_SNPs_17153 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr10 75520579 75520579 1 + G A BLCA 75520570 + 75520550 75520590 41 TGGGCCTCCTCAGCCACTGCCTCCTAAGCGCCTGGACCCTG TGGGCCTCCTCAGCCACTGCCTCCTAAGCACCTGGACCCTG < 41bp 1 0.41364640303546 1 0.497589766979218 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520570 chr10:75520579 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_17154 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:75520560-75520580
64251 chr1 231114988 231114988 1 + G A BLCA 231114974 + 231114954 231114994 41 ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCGAGACTA ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCAAGACTA < 41bp 1 0.614630365935926 1 0.301104247570038 experiment 0.770739268128148 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARV1 ENSG00000173409 CDS Human protein_coding chr1:231114974 chr1:231114988 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_17155 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:231114958-231115020
64251 chr5 54720564 54720564 1 + G C BLCA 54720581 + 54720561 54720601 41 CAAGAGAGATATTGTGTTTGCTGCCAGCCTCTACTTGTAGA CAACAGAGATATTGTGTTTGCTGCCAGCCTCTACTTGTAGA < 41bp 1 0.292646545023918 1 0.0951498448848724 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54720581 chr5:54720564 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_17156 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:54720559-54720585
64251 chr19 56153912 56153912 1 + C T BLCA 56153916 + 56153896 56153936 41 CCACCCCACCCTCGGTCCTCCTCTCCGGAGGCCATGGACCC CCACCCCACCCTCGGTTCTCCTCTCCGGAGGCCATGGACCC < 41bp 1 0.141144600685596 1 0.221682697534561 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF580 ENSG00000213015 CDS Human protein_coding chr19:56153916 chr19:56153912 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_17159 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56153881-56153936
64251 chr17 62223773 62223773 1 + C T BLCA 62223763 + 62223743 62223783 41 GTCAATCTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGG GTCAATCTGCAGCGCTAGAGCATGTGCTTGTGCATAACTGG < 41bp 1 0.527244734332955 1 0.580662429332733 experiment 0.945510531334091 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223763 chr17:62223773 . . 0 31 hm5C_associated_SNPs_17160 0 0 24 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223773 62223773 1 + C T BLCA 62223769 + 62223749 62223789 41 CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC CTGCAGCGCTAGAGCATGTGCTTGTGCATAACTGGGGCCGC < 41bp 1 0.407002498828872 1 0.0930295884609222 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223769 chr17:62223773 . . 0 25 hm5C_associated_SNPs_17161 0 0 24 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223773 62223773 1 + C T BLCA 62223787 + 62223767 62223807 41 TGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG TGCTTGTGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG < 41bp 1 0.254388075771403 1 0.0488356947898865 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223787 chr17:62223773 . . 0 7 hm5C_associated_SNPs_17162 0 0 24 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr9 140110130 140110130 1 + C T BLCA 140110114 + 140110094 140110134 41 CCTCCTTCCTGCAATAGGACCTGTCCGGGTGCCCCTCTGGG CCTCCTTCCTGCAATAGGACCTGTCCGGGTGCCCCTTTGGG < 41bp 1 0.0378160558632996 1 0.0841293036937714 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110114 chr9:140110130 synonymous SNV . 0 37 hm5C_associated_SNPs_17164 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:140110107-140110145
64251 chr11 65829391 65829391 1 + G A BLCA 65829381 + 65829361 65829401 41 GAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGC GAATGCCCACAAGGTCCCTCCCCCATGGCTAATTGCCATGC < 41bp 1 0.540649704002374 1 0.217325687408447 experiment 0.918700591995253 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65829381 chr11:65829391 synonymous SNV . 0 31 hm5C_associated_SNPs_17165 0 0 16 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr11:65829380-65829400
64251 chr19 8551106 8551106 1 + G T BLCA 8551091 + 8551071 8551111 41 AACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCT AACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCTGCCCT < 41bp 1 0.335708542216607 1 0.0450824201107025 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551091 chr19:8551106 synonymous SNV . 0 36 hm5C_associated_SNPs_17166 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr19 8551106 8551106 1 + G T BLCA 8551092 + 8551072 8551112 41 ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTG ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCTGCCCTG < 41bp 1 0.233408074526146 1 0.0685535371303558 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551092 chr19:8551106 synonymous SNV . 0 35 hm5C_associated_SNPs_17167 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr19 8551106 8551106 1 + G T BLCA 8551093 + 8551073 8551113 41 CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTGG CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCTGCCCTGG < 41bp 1 0.688710463102004 1 0.0576936900615692 experiment 0.622579073795992 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551093 chr19:8551106 synonymous SNV . 0 34 hm5C_associated_SNPs_17168 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr19 8551106 8551106 1 + G T BLCA 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCTGCCATGGGCCCTGCCCTGGGCGCTGGCAT < 41bp 1 0.24232862009555 1 0.0437374114990234 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551106 synonymous SNV . 0 24 hm5C_associated_SNPs_17169 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr19 8551106 8551106 1 + G T BLCA 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCTGCCATGGGCCCTGCCCTGGGCGCTGGCATT < 41bp 1 0.206062009161108 1 0.0585673451423645 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551106 synonymous SNV . 0 23 hm5C_associated_SNPs_17170 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr19 8551106 8551106 1 + G T BLCA 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCTGCCATGGGCCCTGCCCTGGGCGCTGGCATTG < 41bp 1 0.736261105505604 1 0.0427222847938538 experiment 0.527477788988793 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551106 synonymous SNV . 0 22 hm5C_associated_SNPs_17171 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:8551073-8551110
64251 chr5 76355520 76355520 1 + G A BLCA 76355513 + 76355493 76355533 41 GAGCTGGAAAACGTAGGGAGCAGGTTGGAAGTGAAGGAACT GAGCTGGAAAACGTAGGGAGCAGGTTGAAAGTGAAGGAACT < 41bp 1 0.394628583818831 1 0.382625490427017 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76355513 chr5:76355520 nonsynonymous SNV 0.998 4 28 hm5C_associated_SNPs_17172 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:76355502-76355532
64251 chr7 128119304 128119304 1 + G A BLCA 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CAAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.111074730678795 1 0.149672299623489 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119304 nonsynonymous SNV 0.984 4 2 hm5C_associated_SNPs_17173 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr11 33078731 33078731 1 + G T BLCA 33078749 + 33078729 33078769 41 AAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGA AATATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGA < 41bp 1 0.341293190401418 1 0.250220715999603 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33078749 chr11:33078731 nonsynonymous SNV 0.981 2 3 hm5C_associated_SNPs_17174 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:33078718-33078741
64251 chr11 65267925 65267925 1 + C A BLCA 65267931 + 65267911 65267951 41 AGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGG AGCAGACAGGATTCAAGGAACCAGTGTTTGATGAAGCTAGG < 41bp 1 0.375815234955721 1 0.193825840950012 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267931 chr11:65267925 . . 0 15 hm5C_associated_SNPs_17175 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267925 65267925 1 + C A BLCA 65267932 + 65267912 65267952 41 GCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGA GCAGACAGGATTCAAGGAACCAGTGTTTGATGAAGCTAGGA < 41bp 1 0.665310183181645 1 0.215543538331985 experiment 0.66937963363671 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267932 chr11:65267925 . . 0 14 hm5C_associated_SNPs_17176 0 0 83 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65271701 65271701 1 + G A BLCA 65271692 + 65271672 65271712 41 GTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGC GTTCTAGTGAGTGTATGAGACCTTGCAGTAAGTTTATCAGC < 41bp 1 0.120506727162586 1 0.0959185659885406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271692 chr11:65271701 . . 0 30 hm5C_associated_SNPs_17177 0 0 103 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271400-65271740
64251 chr12 56515127 56515127 1 + C T BLCA 56515120 + 56515100 56515140 41 GAGGAGTTAAAGAAGCAGGTCAGCAACCTGCTGGCCACCAA GAGGAGTTAAAGAAGCAGGTCAGCAACTTGCTGGCCACCAA < 41bp 1 0.706213598652858 1 0.260607004165649 experiment 0.587572802694283 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515120 chr12:56515127 synonymous SNV . 0 28 hm5C_associated_SNPs_17178 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr12:56515112-56515138
64251 chr22 35726432 35726432 1 + C T BLCA 35726424 + 35726404 35726444 41 ATGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAAT ATGAGCAGCTGACAGAGGAGCTGCTCATTGTCAATGACAAT < 41bp 1 0.129953596844531 1 0.0741252303123474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35726424 chr22:35726432 synonymous SNV . 0 29 hm5C_associated_SNPs_17179 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:35726418-35726450
64251 chr11 65270535 65270535 1 + G C BLCA 65270555 + 65270535 65270575 41 GATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTT CATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTT < 41bp 1 0.470680189196861 1 0.159710884094238 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270555 chr11:65270535 . . 0 1 hm5C_associated_SNPs_17181 0 0 119 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65270460-65270560
64251 chr5 73045770 73045770 1 + G A BLCA 73045760 + 73045740 73045780 41 GGATCTCATCAGCGACATGTCATGATTGCAGAGCGCATCGA GGATCTCATCAGCGACATGTCATGATTGCAAAGCGCATCGA < 41bp 1 0.753233203484958 1 0.0647619962692261 experiment 0.493533593030084 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73045760 chr5:73045770 nonsynonymous SNV 0.073 0 31 hm5C_associated_SNPs_17182 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr5:73045753-73045774
64251 chr4 160264498 160264498 1 + C T BLCA 160264487 + 160264467 160264507 41 TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTG TGAGAAGCTAAGGATGATTGCAAAAGAAATTTGTCACGTTG < 41bp 1 0.652867186054068 1 0.658014178276062 experiment 0.694265627891863 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160264487 chr4:160264498 nonsynonymous SNV 0.988 4 32 hm5C_associated_SNPs_17184 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:160264475-160264513
64251 chr6 170866126 170866126 1 + G A BLCA 170866140 + 170866120 170866160 41 GGATCAGAACAACAGCCTGCCACCTTACGCTCAGGGCTTGG GGATCAAAACAACAGCCTGCCACCTTACGCTCAGGGCTTGG < 41bp 1 0.400301053105127 1 0.0565184056758881 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBP ENSG00000112592 CDS Human protein_coding chr6:170866140 chr6:170866126 synonymous SNV . 0 7 hm5C_associated_SNPs_17185 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:170866057-170866145
64251 chr15 52356167 52356167 1 + A T BLCA 52356166 + 52356146 52356186 41 ACTTTGATATTGATGAAGTTCAGCTTGATCCAAGAGCTCTG ACTTTGATATTGATGAAGTTCTGCTTGATCCAAGAGCTCTG < 41bp 1 0.635793579190057 1 0.264804422855377 experiment 0.728412841619886 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356166 chr15:52356167 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_17186 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:52356160-52356180
64251 chr7 114655788 114655788 1 + G A BLCA 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTAACCCTTTG < 41bp 1 0.775268461293433 1 0.312954843044281 experiment 0.449463077413134 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655788 synonymous SNV . 0 33 hm5C_associated_SNPs_17187 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:114655753-114655788
64251 chr8 95885644 95885644 1 + C T BLCA 95885659 + 95885639 95885679 41 CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG CCAGGTAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG < 41bp 1 0.629179219397612 1 0.203479409217834 experiment 0.741641561204775 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95885659 chr8:95885644 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_17195 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:95885631-95885667
64251 chr17 49239126 49239126 1 + G C BLCA 49239112 + 49239092 49239132 41 CATTATACATGGCAGTGATTCTGTGGAGAGTGCAGAGAAGG CATTATACATGGCAGTGATTCTGTGGAGAGTGCACAGAAGG < 41bp 1 0.459416048162985 1 0.72057843208313 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239112 chr17:49239126 nonsynonymous SNV 0.996 0 35 hm5C_associated_SNPs_17198 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr17 49239126 49239126 1 + G C BLCA 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTGTGGAGAGTGCACAGAAGGAGATCGGCTTGT < 41bp 1 0.392854879053242 1 0.104297041893005 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239126 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_17199 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr3 188242483 188242483 1 + A G BLCA 188242472 + 188242452 188242492 41 GGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCA GGGGAATCCCGGAGGCAAGACACTTGAGGAGGGGCGCTCCA < 41bp 1 0.187611857974937 1 0.0565183460712433 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPP ENSG00000145012 CDS Human protein_coding chr3:188242472 chr3:188242483 nonsynonymous SNV 0.861 4 32 hm5C_associated_SNPs_17200 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:188242466-188242487
64251 chr15 45003774 45003774 1 + C G BLCA 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTGGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC < 41bp 1 0.163375340441643 1 0.069319486618042 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003774 synonymous SNV . 0 8 hm5C_associated_SNPs_17201 0 0 43 PTBP1 POSTAR2 GSE19323,GSM480477 chr15:45003760-45003780
64251 chr17 66526542 66526542 1 + C G BLCA 66526558 + 66526538 66526578 41 TCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA TCCTGAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA < 41bp 1 0.542854613203916 1 0.909718930721283 experiment 0.914290773592167 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66526558 chr17:66526542 synonymous SNV . 0 5 hm5C_associated_SNPs_17203 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:66526482-66526571
64251 chr16 77775671 77775671 1 + G C BLCA 77775688 + 77775668 77775708 41 CCTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC CCTCAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC < 41bp 1 0.689690913012689 1 0.552094578742981 experiment 0.620618173974623 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775688 chr16:77775671 nonsynonymous SNV 0.112 0 4 hm5C_associated_SNPs_17204 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr16 77775671 77775671 1 + G C BLCA 77775689 + 77775669 77775709 41 CTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA CTCAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA < 41bp 1 0.526843445070622 1 0.682348489761353 experiment 0.946313109858755 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775689 chr16:77775671 nonsynonymous SNV 0.112 0 3 hm5C_associated_SNPs_17205 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr2 32828145 32828145 1 + T A BLCA 32828127 + 32828107 32828147 41 GACCAGAAGAGAAGTGGAATCCTCAGACCTCAAGCTTTTTG GACCAGAAGAGAAGTGGAATCCTCAGACCTCAAGCTTTATG < 41bp 1 0.0971866773275454 1 0.0665454864501953 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32828127 chr2:32828145 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_17206 0 0 3 EIF3D POSTAR2 ENCODE chr2:32828145-32828148
64251 chr20 35866820 35866820 1 + G A BLCA 35866808 + 35866788 35866828 41 CCTCTTTCCTTTGGCAGGATCGCTGCAGAGCAGAGCAGTAG CCTCTTTCCTTTGGCAGGATCGCTGCAGAGCAAAGCAGTAG < 41bp 1 0.300886852854368 1 0.251753449440002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35866808 chr20:35866820 synonymous SNV . 0 33 hm5C_associated_SNPs_17207 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35866786-35866824
64251 chr19 48179158 48179158 1 + C G BLCA 48179146 + 48179126 48179166 41 CTGGATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAAGG CTGGATAATCCCGGGGAGGCCCAAAGTGCCTTGTATGAAGG < 41bp 1 0.145958826462974 1 0.701330006122589 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BICRA ENSG00000063169 CDS Human protein_coding chr19:48179146 chr19:48179158 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_17209 0 0 1 PRPF8 POSTAR2 ENCODE chr19:48179155-48179215
64251 chr2 37475346 37475346 1 + G A BLCA 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATAAATCCAAAGAAGATGGGAGAGAGA < 41bp 1 0.430713116369607 1 0.490877419710159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475346 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_17210 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475346 37475346 1 + G A BLCA 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATAAATCCAAAGAAGATGGGAGAGAGAT < 41bp 1 0.407134950951458 1 0.322917401790619 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475346 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_17211 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475355 37475355 1 + G T BLCA 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATGAATCCAAATAAGATGGGAGAGAGA < 41bp 1 0.359299314634437 1 0.498546242713928 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475355 nonsynonymous SNV 0.999 0 26 hm5C_associated_SNPs_17212 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475355 37475355 1 + G T BLCA 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATGAATCCAAATAAGATGGGAGAGAGAT < 41bp 1 0.249097379857346 1 0.228430807590485 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475355 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_17213 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr6 44274746 44274746 1 - G A BRCA 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC TGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC < 41bp 1 0.514239745845444 1 0.859180927276611 experiment 0.971520508309112 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274746 nonsynonymous SNV 0.995 5 1 hm5C_associated_SNPs_17214 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44274735-44274760
64251 chr6 43417235 43417235 1 + C T BRCA 43417228 + 43417208 43417248 41 CAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA CAGCTGCTCCAGCAGACCATCTGCAAATGCTTTGCCAACAA < 41bp 1 0.772163415744303 1 0.779264450073242 experiment 0.455673168511395 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43417228 chr6:43417235 nonsynonymous SNV 0.994 2 28 hm5C_associated_SNPs_17215 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43417208-43417238
64251 chr1 94953135 94953135 1 + C T BRCA 94953142 + 94953122 94953162 41 TTGTTTCGGTTTTCAATGGGCTTCATTGATAGTATTATTGC TTGTTTCGGTTTTTAATGGGCTTCATTGATAGTATTATTGC < 41bp 1 0.350772386765224 1 0.103641092777252 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94953142 chr1:94953135 nonsynonymous SNV 0.996 2 14 hm5C_associated_SNPs_17216 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:94953101-94953137
64251 chr15 89659692 89659692 1 + A G BRCA 89659711 + 89659691 89659731 41 TACTTCCAGGACTCGGGGCTCTCACGCTTTCTGCTCAAGTC TGCTTCCAGGACTCGGGGCTCTCACGCTTTCTGCTCAAGTC < 41bp 1 0.33240739335777 1 0.116804271936417 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89659711 chr15:89659692 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_17217 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr15:89659687-89659715
64251 chr3 128631355 128631355 1 + C G BRCA 128631356 + 128631336 128631376 41 CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATGAGCAGA CTTTTCCTTCCCAGATGCTGCAGAAAACCTAGATGAGCAGA < 41bp 1 0.521262853169532 1 0.642116248607635 experiment 0.957474293660937 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128631356 chr3:128631355 nonsynonymous SNV 0.995 1 20 hm5C_associated_SNPs_17218 0 0 1 SF3A3 POSTAR2 ENCODE chr3:128631305-128631377
64251 chr11 76572075 76572075 1 + G T BRCA 76572057 + 76572037 76572077 41 ACCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGGAC ACCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGTAC < 41bp 1 0.286293829251539 1 0.112675964832306 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572057 chr11:76572075 nonsynonymous SNV 0.994 3 39 hm5C_associated_SNPs_17219 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:76572075-76572076
64251 chr11 76572075 76572075 1 + G T BRCA 76572058 + 76572038 76572078 41 CCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGGACT CCGAGAGGGCTACTGGGGCCCCACGACCTCCACGCTGTACT < 41bp 1 0.362741794122704 1 0.101051956415176 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572058 chr11:76572075 nonsynonymous SNV 0.994 3 38 hm5C_associated_SNPs_17220 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:76572075-76572076
64251 chr22 41923399 41923399 1 + C T BRCA 41923388 + 41923368 41923408 41 AGCCTCGCCACCTTGGGGGCCGGGCCATCATCACCAAGAGC AGCCTCGCCACCTTGGGGGCCGGGCCATCATTACCAAGAGC < 41bp 1 0.284729336832137 1 0.64673638343811 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923388 chr22:41923399 synonymous SNV . 0 32 hm5C_associated_SNPs_17221 0 0 1 RPS3 POSTAR2 ENCODE chr22:41923359-41923403
64251 chr22 41865164 41865164 1 + G T BRCA 41865147 + 41865127 41865167 41 ACCTCATCTTTGTCAGTGCACAAAATGGCGCCCTACAGCCT ACCTCATCTTTGTCAGTGCACAAAATGGCGCCCTACATCCT < 41bp 1 0.603207568369081 1 0.495965510606766 experiment 0.793584863261838 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41865147 chr22:41865164 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_17222 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr22:41865144-41865168
64251 chr12 52379131 52379131 1 + C T BRCA 52379127 + 52379107 52379147 41 CCGAATCAGAGGGTGGGGACCAAACGGTAGGAGGGCCTGGG CCGAATCAGAGGGTGGGGACCAAATGGTAGGAGGGCCTGGG < 41bp 1 0.363200378339557 1 0.735336661338806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52379127 chr12:52379131 stopgain 0.999 1 25 hm5C_associated_SNPs_17224 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:52379113-52379142
64251 chr19 36370329 36370329 1 + G C BRCA 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC CGCTTCCTGCAGGAACGACCCTGACCCGGCCCCCTTCACCC < 41bp 1 0.418072880295048 1 0.113428562879562 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370340 chr19:36370329 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_17230 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36370316-36370342
64251 chr1 27106816 27106816 1 + C T BRCA 27106819 + 27106799 27106839 41 CCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCACT CCACACCCCCCTTCAGCTGCCTGGAGAAGTTGTATAGCACT < 41bp 1 0.523606473599673 1 0.600266456604004 experiment 0.952787052800654 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27106819 chr1:27106816 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_17236 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27106747-27106820
64251 chr15 72855839 72855839 1 + T C BRCA 72855834 + 72855814 72855854 41 TTCGCTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT TTCGCTGCAAATGTGGGCGCCAATTCTGGTAAGCAAGTGAT < 41bp 1 0.0484142437328649 1 0.191669940948486 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72855834 chr15:72855839 synonymous SNV . 0 26 hm5C_associated_SNPs_17237 0 0 2 PRPF8 POSTAR2 ENCODE chr15:72855800-72855870
64251 chr1 1460657 1460657 1 + C T BRCA 1460670 + 1460650 1460690 41 CTTCCTTCGGAAGCGAGCCACCGTGAGTGTCACTAAGCCTC CTTCCTTTGGAAGCGAGCCACCGTGAGTGTCACTAAGCCTC < 41bp 1 0.181809620126792 1 0.163429528474808 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1460670 chr1:1460657 nonsynonymous SNV 0.014 4 8 hm5C_associated_SNPs_17239 0 0 3 BUD13 POSTAR2 ENCODE chr1:1460601-1460672
64251 chr1 154303935 154303935 1 + G A BRCA 154303952 + 154303932 154303972 41 AGCGATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT AGCAATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT < 41bp 1 0.157618685464493 1 0.072866827249527 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154303952 chr1:154303935 nonsynonymous SNV 0.999 5 4 hm5C_associated_SNPs_17241 0 0 2 PPIG POSTAR2 ENCODE chr1:154303935-154303974
64251 chr16 28845927 28845927 1 + G C BRCA 28845926 + 28845906 28845946 41 CCCGCCTCTGGTGGCTGCCACGCCCTATTCTTCCTACATCC CCCGCCTCTGGTGGCTGCCACCCCCTATTCTTCCTACATCC < 41bp 1 0.185685226029919 1 0.643854737281799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845926 chr16:28845927 synonymous SNV . 0 22 hm5C_associated_SNPs_17242 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:28845901-28845933
64251 chr7 70252221 70252221 1 + G T BRCA 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCGGCCACAAGTATGGCCCCAGTGTGCAGAACTTTAGCA < 41bp 1 0.131408833168508 1 0.067649632692337 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252221 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_17243 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr7 32598971 32598971 1 + T G BRCA 32598978 + 32598958 32598998 41 AGAGTCTTCCAATTACTGTACAACCTCAAGCTAATACGGGA AGAGTCTTCCAATGACTGTACAACCTCAAGCTAATACGGGA < 41bp 1 0.174880382177159 1 0.107087075710297 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AVL9 ENSG00000105778 CDS Human protein_coding chr7:32598978 chr7:32598971 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_17244 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:32598948-32598975
64251 chr7 32598959 32598959 1 + G C BRCA 32598978 + 32598958 32598998 41 AGAGTCTTCCAATTACTGTACAACCTCAAGCTAATACGGGA ACAGTCTTCCAATTACTGTACAACCTCAAGCTAATACGGGA < 41bp 1 0.157276466827176 1 0.0860389173030853 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AVL9 ENSG00000105778 CDS Human protein_coding chr7:32598978 chr7:32598959 nonsynonymous SNV 0.836 0 2 hm5C_associated_SNPs_17245 0 0 7 CSTF2 POSTAR2 GSE37401,GSM917676 chr7:32598931-32598969
64251 chr2 32824940 32824940 1 + C T BRCA 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGGTGGTCATAGCGTGCGATTTAATCCAAACCT < 41bp 1 0.0965295129498336 1 0.524673283100128 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824940 synonymous SNV . 0 30 hm5C_associated_SNPs_17247 0 0 3 FUS POSTAR2 SRX029328 chr2:32824936-32824959
64251 chr2 28521317 28521317 1 + C G BRCA 28521298 + 28521278 28521318 41 TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCCGTACA TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCCGTAGA < 41bp 1 0.214987816338656 1 0.193666994571686 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521298 chr2:28521317 stopgain 0.994 1 40 hm5C_associated_SNPs_17249 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:28521297-28521319
64251 chr20 11900400 11900400 1 + C T BRCA 11900386 + 11900366 11900406 41 TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCGATGTT TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGTGATGTT < 41bp 1 0.194631353416733 1 0.128027737140656 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11900386 chr20:11900400 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_17250 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:11900373-11900439
64251 chr14 60591901 60591901 1 + T G BRCA 60591886 + 60591866 60591906 41 GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTC GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCGTGGTC < 41bp 1 0.785407749008349 1 0.568998694419861 experiment 0.429184501983302 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591886 chr14:60591901 synonymous SNV . 0 36 hm5C_associated_SNPs_17251 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr14:60591880-60591920
64251 chr17 71232434 71232434 1 + A G BRCA 71232418 + 71232398 71232438 41 AGGAGTCCCTACTGATGTTACAGTTACTGAGACTCCAGAAA AGGAGTCCCTACTGATGTTACAGTTACTGAGACTCCGGAAA < 41bp 1 0.304135829017342 1 0.0529953837394714 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232418 chr17:71232434 synonymous SNV . 0 37 hm5C_associated_SNPs_17252 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232414-71232454
64251 chr17 71232434 71232434 1 + A G BRCA 71232445 + 71232425 71232465 41 TGAGACTCCAGAAAAGAACACAGAATCCCTCATTTTAAGCC TGAGACTCCGGAAAAGAACACAGAATCCCTCATTTTAAGCC < 41bp 1 0.544106450004658 1 0.14340952038765 experiment 0.911787099990684 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232445 chr17:71232434 synonymous SNV . 0 10 hm5C_associated_SNPs_17253 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232414-71232454
64251 chr19 10200684 10200684 1 + C T BRCA 10200688 + 10200668 10200708 41 TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGCGTG TTGCCTGCTCCTCCTGTGACCACGTCTGGTGGCGCCGCGTG < 41bp 1 0.666545934525135 1 0.655128657817841 experiment 0.666908130949731 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200688 chr19:10200684 nonsynonymous SNV 0.995 0 17 hm5C_associated_SNPs_17254 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr20 17956500 17956500 1 + G A BRCA 17956504 + 17956484 17956524 41 AAGTGCTGTTCAACATGAAACCTTAAACTATATAGGTCTGC AAGTGCTGTTCAACATAAAACCTTAAACTATATAGGTCTGC < 41bp 1 0.120172342757657 1 0.0861762464046478 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956504 chr20:17956500 nonsynonymous SNV 0.944 0 17 hm5C_associated_SNPs_17256 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:17956452-17956507
64251 chr7 6634119 6634119 1 + C A BRCA 6634139 + 6634119 6634159 41 CTGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA ATGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA < 41bp 1 0.0464847537557415 1 0.255788266658783 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634139 chr7:6634119 stopgain 1.000 1 1 hm5C_associated_SNPs_17259 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:6634104-6634125
64251 chr9 139887830 139887830 1 + C A BRCA 139887814 + 139887794 139887834 41 GCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCCCCCG GCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCACCCG < 41bp 1 0.469580522423036 1 0.796630859375 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887814 chr9:139887830 nonsynonymous SNV 0.004 0 37 hm5C_associated_SNPs_17260 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139887828-139887850
64251 chr9 95869982 95869982 1 + C G BRCA 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCGCCTGGTGGAGGACACGCCTTTCCTGACAGGCCATGGGC < 41bp 1 0.0629020274428017 1 0.0597564280033112 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869982 nonsynonymous SNV 0.994 2 11 hm5C_associated_SNPs_17261 0 0 2 DDX3X POSTAR2 ENCODE chr9:95869959-95869999
64251 chr19 13054630 13054630 1 + A G BRCA 13054643 + 13054623 13054663 41 GACAAGGAGGATGATGAGGACAAAGATGAGGATGAGGAGGA GACAAGGGGGATGATGAGGACAAAGATGAGGATGAGGAGGA < 41bp 1 0.577829624055757 1 0.495491772890091 experiment 0.844340751888486 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054643 chr19:13054630 nonsynonymous SNV 0.381 1 8 hm5C_associated_SNPs_17262 0 0 67 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr5 179149818 179149818 1 + C T BRCA 179149810 + 179149790 179149830 41 CATTTTTTTTTCTAGGGAATCTGGAAACCCAGGAAAATACC CATTTTTTTTTCTAGGGAATCTGGAAACTCAGGAAAATACC < 41bp 1 0.713386262022264 1 0.630620002746582 experiment 0.573227475955472 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179149810 chr5:179149818 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_17263 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:179149800-179149820
64251 chr1 223934702 223934702 1 + C G BRCA 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATGAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA < 41bp 1 0.765123178568059 1 0.751827418804169 experiment 0.469753642863882 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934702 nonsynonymous SNV 0.814 2 4 hm5C_associated_SNPs_17264 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934702 223934702 1 + C G BRCA 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TGAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT < 41bp 1 0.0648255202167866 1 0.0443982481956482 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934702 nonsynonymous SNV 0.814 2 2 hm5C_associated_SNPs_17265 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr2 202141586 202141586 1 + C T BRCA 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTTGGGGATACTGTCTGATCATCAACAATCA < 41bp 1 0.255699739046773 1 0.106071382761002 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141586 nonsynonymous SNV 0.931 5 13 hm5C_associated_SNPs_17266 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:202141579-202141603
64251 chr11 119142562 119142562 1 + G A BRCA 119142558 + 119142538 119142578 41 TCGGATTACTAAAGCAGATGCTGCGGAATTTTGGAGAAAAG TCGGATTACTAAAGCAGATGCTGCAGAATTTTGGAGAAAAG < 41bp 1 0.436756540975962 1 0.397668749094009 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CBL ENSG00000110395 CDS Human protein_coding chr11:119142558 chr11:119142562 synonymous SNV . 0 25 hm5C_associated_SNPs_17267 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119142554-119142591
64251 chr22 29177137 29177137 1 + G A BRCA 29177131 + 29177111 29177151 41 GAACCACAGTGTGAAGTTGCCCGAAGGAAGCTTCAGGAGAT GAACCACAGTGTGAAGTTGCCCGAAGAAAGCTTCAGGAGAT < 41bp 1 0.634056465780531 1 0.428922295570374 experiment 0.731887068438939 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29177131 chr22:29177137 synonymous SNV . 0 27 hm5C_associated_SNPs_17268 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr22:29177049-29177149
64251 chr7 92926136 92926136 1 + A G BRCA 92926143 + 92926123 92926163 41 ATCTTTGTTTTGGATATAATCAGCAGGTAGTATTTAAGATC ATCTTTGTTTTGGGTATAATCAGCAGGTAGTATTTAAGATC < 41bp 1 0.795806821944433 1 0.869550168514252 experiment 0.408386356111134 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS50 ENSG00000004766 CDS Human protein_coding chr7:92926143 chr7:92926136 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_17269 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:92926117-92926148
64251 chrX 2641396 2641396 1 + G A BRCA 2641380 + 2641360 2641400 41 GGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGA GGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAAGGGA < 41bp 1 0.333662021760976 1 0.664326071739197 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641380 chrX:2641396 nonsynonymous SNV 0.081 1 37 hm5C_associated_SNPs_17270 0 0 6 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chrX 2641396 2641396 1 + G A BRCA 2641383 + 2641363 2641403 41 GGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGAAGA GGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAAGGGAAGA < 41bp 1 0.295139723145893 1 0.428235709667206 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CD99 ENSG00000002586 CDS Human protein_coding chrX:2641383 chrX:2641396 nonsynonymous SNV 0.081 1 34 hm5C_associated_SNPs_17271 0 0 6 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chrX 2641396 2641396 1 + G A BRCA 2641384 + 2641364 2641404 41 GCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGAAGAG GCAGTGATGGTGGAGGCAGCCACAGGAAAGAAAGGGAAGAG < 41bp 1 0.62455952489402 1 0.58272248506546 experiment 0.750880950211961 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CD99 ENSG00000002586 CDS Human protein_coding chrX:2641384 chrX:2641396 nonsynonymous SNV 0.081 1 33 hm5C_associated_SNPs_17272 0 0 6 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chrX 2641359 2641359 1 + A T BRCA 2641365 + 2641345 2641385 41 TGTCTTGCAGGAAAAGGAGGCAGTGATGGTGGAGGCAGCCA TGTCTTGCAGGAAATGGAGGCAGTGATGGTGGAGGCAGCCA < 41bp 1 0.318026301486666 1 0.624962210655212 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641365 chrX:2641359 nonsynonymous SNV 0.001 0 15 hm5C_associated_SNPs_17273 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:2641340-2641360
64251 chr5 130726778 130726778 1 + G A BRCA 130726785 + 130726765 130726805 41 TGGATACGAAGGCGGGATAGCCCTGGTCCTTTCTCCAGTGA TGGATACGAAGGCAGGATAGCCCTGGTCCTTTCTCCAGTGA < 41bp 1 0.490552043673063 1 0.0907153487205505 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130726785 chr5:130726778 synonymous SNV . 0 14 hm5C_associated_SNPs_17274 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:130726762-130726800
64251 chr6 44360503 44360503 1 + G A BRCA 44360506 + 44360486 44360526 41 ATGCCAACTCAGTGGAGGACCATTGCTCCAATCATTGGAAG ATGCCAACTCAGTGGAGAACCATTGCTCCAATCATTGGAAG < 41bp 1 0.381962470199767 1 0.373475790023804 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC5L ENSG00000096401 CDS Human protein_coding chr6:44360506 chr6:44360503 synonymous SNV . 0 18 hm5C_associated_SNPs_17275 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:44360408-44360534
64251 chr20 5163085 5163085 1 + C G BRCA 5163068 + 5163048 5163088 41 TACTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTCTAC TACTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTGTAC < 41bp 1 0.172425129232482 1 0.0466034710407257 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDS2 ENSG00000101290 CDS Human protein_coding chr20:5163068 chr20:5163085 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_17276 0 0 1 PRPF8 POSTAR2 ENCODE chr20:5163060-5163137
64251 chr18 13057640 13057640 1 + G A BRCA 13057639 + 13057619 13057659 41 CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCCTCAG CATGCTTGCTGTGTCGGGATCACTTCCCAGACCCTCCTCAG < 41bp 1 0.265275281004078 1 0.107340753078461 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13057639 chr18:13057640 nonsynonymous SNV 0.943 2 22 hm5C_associated_SNPs_17289 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13057607-13057645
64251 chr16 67006796 67006796 1 + C T BRCA 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTTAACCAGGCGGAACAATATCTGGAGATCAACCCA < 41bp 1 0.301215573003345 1 0.307879149913788 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006796 synonymous SNV . 0 8 hm5C_associated_SNPs_17291 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr19 4442293 4442293 1 + G A BRCA 4442277 + 4442257 4442297 41 ATGGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGA ATGGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAAAGGA < 41bp 1 0.632526066252781 1 0.290593087673187 experiment 0.734947867494438 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442277 chr19:4442293 nonsynonymous SNV 0.987 2 37 hm5C_associated_SNPs_17292 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:4442293-4442294
64251 chr19 4442293 4442293 1 + G A BRCA 4442279 + 4442259 4442299 41 GGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGAGG GGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAAAGGAGG < 41bp 1 0.705161539594932 1 0.683872699737549 experiment 0.589676920810136 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442279 chr19:4442293 nonsynonymous SNV 0.987 2 35 hm5C_associated_SNPs_17293 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:4442293-4442294
64251 chr8 23114072 23114072 1 + C T BRCA 23114068 + 23114048 23114088 41 ATGCAGAGTGAACAGCTTCTCTCACGCAAAGTGGAGTCCTT ATGCAGAGTGAACAGCTTCTCTCATGCAAAGTGGAGTCCTT < 41bp 1 0.513983171880358 1 0.120754420757294 experiment 0.972033656239284 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114068 chr8:23114072 nonsynonymous SNV 0.705 3 25 hm5C_associated_SNPs_17295 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr8 23114072 23114072 1 + C T BRCA 23114070 + 23114050 23114090 41 GCAGAGTGAACAGCTTCTCTCACGCAAAGTGGAGTCCTTAT GCAGAGTGAACAGCTTCTCTCATGCAAAGTGGAGTCCTTAT < 41bp 1 0.278313723268212 1 0.0988568961620331 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114070 chr8:23114072 nonsynonymous SNV 0.705 3 23 hm5C_associated_SNPs_17296 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr3 184104637 184104637 1 + G A BRCA 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACAAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA < 41bp 1 0.742536268156401 1 0.669380068778992 experiment 0.514927463687198 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104637 nonsynonymous SNV 0.600 2 3 hm5C_associated_SNPs_17297 0 0 1 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr3 142840898 142840898 1 + G A BRCA 142840885 + 142840865 142840905 41 GCTAAGACGCTGCAGACAGCCCTGCAGCCCCCTGACTGGCT GCTAAGACGCTGCAGACAGCCCTGCAGCCCCCTAACTGGCT < 41bp 1 0.0958547302287436 1 0.0859431326389313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840885 chr3:142840898 nonsynonymous SNV 0.982 2 34 hm5C_associated_SNPs_17298 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:142840898-142840899
64251 chr3 142840898 142840898 1 + G A BRCA 142840893 + 142840873 142840913 41 GCTGCAGACAGCCCTGCAGCCCCCTGACTGGCTGCAGGGCC GCTGCAGACAGCCCTGCAGCCCCCTAACTGGCTGCAGGGCC < 41bp 1 0.223807239733341 1 0.138791859149933 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840893 chr3:142840898 nonsynonymous SNV 0.982 2 26 hm5C_associated_SNPs_17299 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:142840898-142840899
64251 chr3 142840898 142840898 1 + G A BRCA 142840907 + 142840887 142840927 41 TGCAGCCCCCTGACTGGCTGCAGGGCCACTACCTGGTGGTG TGCAGCCCCCTAACTGGCTGCAGGGCCACTACCTGGTGGTG < 41bp 1 0.470276667380794 1 0.648208439350128 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840907 chr3:142840898 nonsynonymous SNV 0.982 2 12 hm5C_associated_SNPs_17300 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:142840898-142840899
64251 chr13 77574712 77574712 1 + T C BRCA 77574692 + 77574672 77574712 41 AGCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGATTCCT AGCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGATTCCC < 41bp 1 0.327370531773693 1 0.367878079414368 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77574692 chr13:77574712 nonsynonymous SNV 0.805 4 41 hm5C_associated_SNPs_17301 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr13:77574696-77574724
64251 chr17 40715174 40715174 1 + C T BRCA 40715191 + 40715171 40715211 41 TTCCCCCGTGGCCGGGTCTCCAAAGCAGCCGGTGCGTGGCT TTCTCCCGTGGCCGGGTCTCCAAAGCAGCCGGTGCGTGGCT < 41bp 1 0.552101410843326 1 0.625957489013672 experiment 0.895797178313349 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40715191 chr17:40715174 synonymous SNV . 0 4 hm5C_associated_SNPs_17303 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:40715160-40715209
64251 chr9 35733103 35733103 1 + C G BRCA 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGACCACACGTACTCCCTCCCACGGGAAACTGTCTCTAT < 41bp 1 0.144283842368741 1 0.136001586914062 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733103 synonymous SNV . 0 12 hm5C_associated_SNPs_17309 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733103 35733103 1 + C G BRCA 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGACCACACGTACTCCCTCCCACGGGAAACTGTCTCTATG < 41bp 1 0.16050967340135 1 0.182448983192444 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733103 synonymous SNV . 0 11 hm5C_associated_SNPs_17310 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr2 36668460 36668460 1 + G A BRCA 36668446 + 36668426 36668466 41 CCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT CCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTAAAGATT < 41bp 1 0.62793930195019 1 0.715425372123718 experiment 0.74412139609962 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668446 chr2:36668460 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_17311 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:36668460-36668480
64251 chr2 36668460 36668460 1 + G A BRCA 36668448 + 36668428 36668468 41 GCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCT GCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTAAAGATTCT < 41bp 1 0.527981222846848 1 0.501047313213348 experiment 0.944037554306304 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668448 chr2:36668460 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_17312 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:36668460-36668480
64251 chr5 64267547 64267547 1 + G A BRCA 64267545 + 64267525 64267565 41 TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCCGAAT TTTAGAGGAAGAAGCCCCTCCAAATGGTGCTGTTGCCGAAT < 41bp 1 0.161117283176351 1 0.666225910186768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64267545 chr5:64267547 nonsynonymous SNV 0.978 1 23 hm5C_associated_SNPs_17317 0 0 2 GRWD1 POSTAR2 ENCODE chr5:64267538-64267634
64251 chrX 105855830 105855830 1 + C T BRCA 105855825 + 105855805 105855845 41 AACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGA AACTCCCTTCAGAAATAGAGCGCACTAGGAGAAACCAGAGA < 41bp 1 0.295153279507515 1 0.226531803607941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855825 chrX:105855830 stopgain 0.968 0 26 hm5C_associated_SNPs_17318 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrX 105855830 105855830 1 + C T BRCA 105855840 + 105855820 105855860 41 TAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG TAGAGCGCACTAGGAGAAACCAGAGAGGCCTTTAAGAGGCG < 41bp 1 0.746520514215223 1 0.627828776836395 experiment 0.506958971569554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855840 chrX:105855830 stopgain 0.968 0 11 hm5C_associated_SNPs_17319 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrX 105855830 105855830 1 + C T BRCA 105855849 + 105855829 105855869 41 CCAGGAGAAACCAGAGAGGCCTTTAAGAGGCGGGAAGAGTC CTAGGAGAAACCAGAGAGGCCTTTAAGAGGCGGGAAGAGTC < 41bp 1 0.215600699906541 1 0.164468169212341 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855849 chrX:105855830 stopgain 0.968 0 2 hm5C_associated_SNPs_17320 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chr2 242695381 242695381 1 + G A BRCA 242695362 + 242695342 242695382 41 CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCAC < 41bp 1 0.562835809189857 1 0.168179124593735 experiment 0.874328381620285 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695362 chr2:242695381 nonsynonymous SNV 0.001 1 40 hm5C_associated_SNPs_17322 3 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:242695362-242695401
64251 chr11 61105416 61105416 1 + T A BRCA 61105415 + 61105395 61105435 41 CTCACTCCTCCCTTGCAGACCTCCAAGAAGCTGGTGAACTC CTCACTCCTCCCTTGCAGACCACCAAGAAGCTGGTGAACTC < 41bp 1 0.626592318021504 1 0.262101888656616 experiment 0.746815363956993 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61105415 chr11:61105416 nonsynonymous SNV 0.698 0 22 hm5C_associated_SNPs_17323 0 0 3 BUD13 POSTAR2 ENCODE chr11:61105369-61105432
64251 chr2 118582184 118582184 1 + G A BRCA 118582181 + 118582161 118582201 41 GCTCTTTTCTGCCACCCAAACTCGAAAAGTTGAAGACCTGG GCTCTTTTCTGCCACCCAAACTCAAAAAGTTGAAGACCTGG < 41bp 1 0.739179088892874 1 0.431400805711746 experiment 0.521641822214251 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582181 chr2:118582184 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_17325 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:118582184-118582228
64251 chr10 70737326 70737326 1 + A G BRCA 70737312 + 70737292 70737332 41 GATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATC GATTCCGTGCCTCCCACTGCCATTAGTCACTTCAGACAATC < 41bp 1 0.413565739723197 1 0.0159196853637695 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70737312 chr10:70737326 nonsynonymous SNV 0.998 1 35 hm5C_associated_SNPs_17326 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr10:70737282-70737349
64251 chr10 70737298 70737298 1 + G A BRCA 70737312 + 70737292 70737332 41 GATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATC GATTCCATGCCTCCCACTGCCATTAGTCACTTCAAACAATC < 41bp 1 0.403141327832424 1 0.0113374292850494 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70737312 chr10:70737298 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_17327 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:70737280-70737300
64251 chr10 70666626 70666626 1 + G T BRCA 70666624 + 70666604 70666644 41 AGAAGGATTTAATAGACTTTCAGATGAATTCTCCAAATCTC AGAAGGATTTAATAGACTTTCATATGAATTCTCCAAATCTC < 41bp 1 0.226880938948213 1 0.0741825699806213 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX50 ENSG00000107625 CDS Human protein_coding chr10:70666624 chr10:70666626 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_17328 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70666614-70666681
64251 chr21 47978254 47978254 1 + G A BRCA 47978252 + 47978232 47978272 41 AAGGACCTGGGCCTGCCGGCCCGCGCCGTAAGCACCACGTT AAGGACCTGGGCCTGCCGGCCCACGCCGTAAGCACCACGTT < 41bp 1 0.202694271485687 1 0.300191879272461 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47978252 chr21:47978254 nonsynonymous SNV 0.125 4 23 hm5C_associated_SNPs_17329 0 0 4 BUD13 POSTAR2 ENCODE chr21:47978158-47978301
64251 chr8 25149578 25149578 1 + G A BRCA 25149584 + 25149564 25149604 41 CAGCTGCAGCAGATGACGTACAGCCTGATCGAGTGGCGGTC CAGCTGCAGCAGATAACGTACAGCCTGATCGAGTGGCGGTC < 41bp 1 0.246530105979187 1 0.202793091535568 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149584 chr8:25149578 nonsynonymous SNV 0.996 2 15 hm5C_associated_SNPs_17333 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr21 38853104 38853104 1 + G C BRCA 38853089 + 38853069 38853109 41 GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGG GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTCATAGG < 41bp 1 0.665634979165957 1 0.835657596588135 experiment 0.668730041668085 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853089 chr21:38853104 nonsynonymous SNV 0.999 4 36 hm5C_associated_SNPs_17335 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:38852989-38853112
64251 chr16 67917881 67917881 1 + C A BRCA 67917892 + 67917872 67917912 41 GCCGTGATGCACCTGGACCACAGTGACCCCATCACTCGGGA GCCGTGATGAACCTGGACCACAGTGACCCCATCACTCGGGA < 41bp 1 0.496169500150264 1 0.25502610206604 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917892 chr16:67917881 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_17336 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:67917866-67917889
64251 chr1 36358824 36358824 1 + C G BRCA 36358839 + 36358819 36358859 41 CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCATG CTGTTGCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCATG < 41bp 1 0.352373186708627 1 0.284176111221313 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36358839 chr1:36358824 nonsynonymous SNV 0.996 3 6 hm5C_associated_SNPs_17338 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr1:36358814-36358836
64251 chr14 103802230 103802230 1 + C G BRCA 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCGCAGCGTGTCAGAGCAGTTCTATCGCTACAAGATG < 41bp 1 0.178291246064998 1 0.112993866205215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802230 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_17339 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr1 154232226 154232226 1 + G A BRCA 154232218 + 154232198 154232238 41 CAAGTGGGCATACCCGTAGACCTTGTCTGACTGTGCTCATG CAAGTGGGCATACCCGTAGACCTTGTCTAACTGTGCTCATG < 41bp 1 0.0297002620203836 1 0.0104533731937408 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232218 chr1:154232226 . . 0 29 hm5C_associated_SNPs_17340 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232226 154232226 1 + G A BRCA 154232228 + 154232208 154232248 41 TACCCGTAGACCTTGTCTGACTGTGCTCATGGCCAGGCAGG TACCCGTAGACCTTGTCTAACTGTGCTCATGGCCAGGCAGG < 41bp 1 0.196398107714396 1 0.105987340211868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232228 chr1:154232226 . . 0 19 hm5C_associated_SNPs_17341 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232226 154232226 1 + G A BRCA 154232233 + 154232213 154232253 41 GTAGACCTTGTCTGACTGTGCTCATGGCCAGGCAGGGGGGA GTAGACCTTGTCTAACTGTGCTCATGGCCAGGCAGGGGGGA < 41bp 1 0.0981176978915694 1 0.081933468580246 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232233 chr1:154232226 . . 0 14 hm5C_associated_SNPs_17342 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232226 154232226 1 + G A BRCA 154232240 + 154232220 154232260 41 TTGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTA TTGTCTAACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTA < 41bp 1 0.187191076844182 1 0.295532166957855 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232240 chr1:154232226 . . 0 7 hm5C_associated_SNPs_17343 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232226 154232226 1 + G A BRCA 154232241 + 154232221 154232261 41 TGTCTGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTAT TGTCTAACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTAT < 41bp 1 0.279989484328419 1 0.664708077907562 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232241 chr1:154232226 . . 0 6 hm5C_associated_SNPs_17344 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chr1 154232226 154232226 1 + G A BRCA 154232245 + 154232225 154232265 41 TGACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTATGCAA TAACTGTGCTCATGGCCAGGCAGGGGGGACAGTGTATGCAA < 41bp 1 0.617428817714739 1 0.86819851398468 experiment 0.765142364570522 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA58B ENSG00000201129 ncRNA_exonic Human snoRNA chr1:154232245 chr1:154232226 . . 0 2 hm5C_associated_SNPs_17345 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154232092-154232235
64251 chrY 10037864 10037864 1 + G A BRCA 10037852 + 10037832 10037872 41 GAATTGCAGGACACATTGATCATCGACACTTCGAACGCACT GAATTGCAGGACACATTGATCATCGACACTTCAAACGCACT < 41bp 1 0.193888235138465 1 0.170015931129456 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout|27356879;GSE66010;miCLIP;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037852 chrY:10037864 . . 0 33 hm5C_associated_SNPs_17346 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037855 + 10037835 10037875 41 TTGCAGGACACATTGATCATCGACACTTCGAACGCACTTGC TTGCAGGACACATTGATCATCGACACTTCAAACGCACTTGC < 41bp 1 0.701440246226016 1 0.234003186225891 experiment 0.597119507547967 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037855 chrY:10037864 . . 0 30 hm5C_associated_SNPs_17347 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037858 + 10037838 10037878 41 CAGGACACATTGATCATCGACACTTCGAACGCACTTGCGGC CAGGACACATTGATCATCGACACTTCAAACGCACTTGCGGC < 41bp 1 0.124694569377074 1 0.25728178024292 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037858 chrY:10037864 . . 0 27 hm5C_associated_SNPs_17348 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037860 + 10037840 10037880 41 GGACACATTGATCATCGACACTTCGAACGCACTTGCGGCCC GGACACATTGATCATCGACACTTCAAACGCACTTGCGGCCC < 41bp 1 0.579668338156223 1 0.401710569858551 experiment 0.840663323687554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037860 chrY:10037864 . . 0 25 hm5C_associated_SNPs_17349 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037863 + 10037843 10037883 41 CACATTGATCATCGACACTTCGAACGCACTTGCGGCCCGGG CACATTGATCATCGACACTTCAAACGCACTTGCGGCCCGGG < 41bp 1 0.148150829521581 1 0.0410185158252716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037863 chrY:10037864 . . 0 22 hm5C_associated_SNPs_17350 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037867 + 10037847 10037887 41 TTGATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCC TTGATCATCGACACTTCAAACGCACTTGCGGCCCGGGTTCC < 41bp 1 0.4101732901165 1 0.0997254848480225 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037867 chrY:10037864 . . 0 18 hm5C_associated_SNPs_17351 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037864 10037864 1 + G A BRCA 10037869 + 10037849 10037889 41 GATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCCTC GATCATCGACACTTCAAACGCACTTGCGGCCCGGGTTCCTC < 41bp 1 0.314068635362872 1 0.0768290758132935 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037869 chrY:10037864 . . 0 16 hm5C_associated_SNPs_17352 0 0 125 NCBP3 POSTAR2 GSE38201,GSM936507 chrY:10037807-10037874
64251 chrY 10037856 10037856 1 + G A BRCA 10037852 + 10037832 10037872 41 GAATTGCAGGACACATTGATCATCGACACTTCGAACGCACT GAATTGCAGGACACATTGATCATCAACACTTCGAACGCACT < 41bp 1 0.277516368050599 1 0.121043264865875 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout|27356879;GSE66010;miCLIP;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037852 chrY:10037856 . . 0 25 hm5C_associated_SNPs_17353 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037855 + 10037835 10037875 41 TTGCAGGACACATTGATCATCGACACTTCGAACGCACTTGC TTGCAGGACACATTGATCATCAACACTTCGAACGCACTTGC < 41bp 1 0.647806351874307 1 0.376715421676636 experiment 0.704387296251385 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037855 chrY:10037856 . . 0 22 hm5C_associated_SNPs_17354 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037858 + 10037838 10037878 41 CAGGACACATTGATCATCGACACTTCGAACGCACTTGCGGC CAGGACACATTGATCATCAACACTTCGAACGCACTTGCGGC < 41bp 1 0.155455727497577 1 0.0810782909393311 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037858 chrY:10037856 . . 0 19 hm5C_associated_SNPs_17355 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037860 + 10037840 10037880 41 GGACACATTGATCATCGACACTTCGAACGCACTTGCGGCCC GGACACATTGATCATCAACACTTCGAACGCACTTGCGGCCC < 41bp 1 0.486824864514493 1 0.22209569811821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037860 chrY:10037856 . . 0 17 hm5C_associated_SNPs_17356 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037863 + 10037843 10037883 41 CACATTGATCATCGACACTTCGAACGCACTTGCGGCCCGGG CACATTGATCATCAACACTTCGAACGCACTTGCGGCCCGGG < 41bp 1 0.146642439500878 1 0.0533668398857117 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037863 chrY:10037856 . . 0 14 hm5C_associated_SNPs_17357 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037867 + 10037847 10037887 41 TTGATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCC TTGATCATCAACACTTCGAACGCACTTGCGGCCCGGGTTCC < 41bp 1 0.277756249503196 1 0.0669629275798798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037867 chrY:10037856 . . 0 10 hm5C_associated_SNPs_17358 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037856 10037856 1 + G A BRCA 10037869 + 10037849 10037889 41 GATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCCTC GATCATCAACACTTCGAACGCACTTGCGGCCCGGGTTCCTC < 41bp 1 0.307315728378334 1 0.0974633693695068 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037869 chrY:10037856 . . 0 8 hm5C_associated_SNPs_17359 0 0 370 PTBP1 POSTAR2 GSE19323,GSM480476 chrY:10037820-10037860
64251 chrY 10037867 10037867 1 + C T BRCA 10037852 + 10037832 10037872 41 GAATTGCAGGACACATTGATCATCGACACTTCGAACGCACT GAATTGCAGGACACATTGATCATCGACACTTCGAATGCACT < 41bp 1 0.159240323924865 1 0.159391552209854 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout|27356879;GSE66010;miCLIP;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037852 chrY:10037867 . . 0 36 hm5C_associated_SNPs_17360 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037867 10037867 1 + C T BRCA 10037855 + 10037835 10037875 41 TTGCAGGACACATTGATCATCGACACTTCGAACGCACTTGC TTGCAGGACACATTGATCATCGACACTTCGAATGCACTTGC < 41bp 1 0.709859491462907 1 0.35847932100296 experiment 0.580281017074186 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037855 chrY:10037867 . . 0 33 hm5C_associated_SNPs_17361 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037867 10037867 1 + C T BRCA 10037858 + 10037838 10037878 41 CAGGACACATTGATCATCGACACTTCGAACGCACTTGCGGC CAGGACACATTGATCATCGACACTTCGAATGCACTTGCGGC < 41bp 1 0.104057836144067 1 0.0767066478729248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037858 chrY:10037867 . . 0 30 hm5C_associated_SNPs_17362 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037867 10037867 1 + C T BRCA 10037860 + 10037840 10037880 41 GGACACATTGATCATCGACACTTCGAACGCACTTGCGGCCC GGACACATTGATCATCGACACTTCGAATGCACTTGCGGCCC < 41bp 1 0.4198577299332 1 0.219381481409073 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037860 chrY:10037867 . . 0 28 hm5C_associated_SNPs_17363 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037867 10037867 1 + C T BRCA 10037863 + 10037843 10037883 41 CACATTGATCATCGACACTTCGAACGCACTTGCGGCCCGGG CACATTGATCATCGACACTTCGAATGCACTTGCGGCCCGGG < 41bp 1 0.242479212047145 1 0.0830055177211761 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037863 chrY:10037867 . . 0 25 hm5C_associated_SNPs_17364 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037867 10037867 1 + C T BRCA 10037869 + 10037849 10037889 41 GATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCCTC GATCATCGACACTTCGAATGCACTTGCGGCCCGGGTTCCTC < 41bp 1 0.32648365216863 1 0.0545448064804077 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037869 chrY:10037867 . . 0 19 hm5C_associated_SNPs_17365 0 0 168 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037852 + 10037832 10037872 41 GAATTGCAGGACACATTGATCATCGACACTTCGAACGCACT GAATTGCAGGACACATTGATCATCGACACTTCGAACACACT < 41bp 1 0.176525259067439 1 0.0813249945640564 experiment 1 Functional Loss 27356879;GSE66012;miCLIP;HEK293;mutations in NSUN3|30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout|27356879;GSE66010;miCLIP;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037852 chrY:10037868 . . 0 37 hm5C_associated_SNPs_17366 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037855 + 10037835 10037875 41 TTGCAGGACACATTGATCATCGACACTTCGAACGCACTTGC TTGCAGGACACATTGATCATCGACACTTCGAACACACTTGC < 41bp 1 0.679081989922551 1 0.297398626804352 experiment 0.641836020154898 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037855 chrY:10037868 . . 0 34 hm5C_associated_SNPs_17367 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037858 + 10037838 10037878 41 CAGGACACATTGATCATCGACACTTCGAACGCACTTGCGGC CAGGACACATTGATCATCGACACTTCGAACACACTTGCGGC < 41bp 1 0.141569877559539 1 0.0604497492313385 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037858 chrY:10037868 . . 0 31 hm5C_associated_SNPs_17368 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037860 + 10037840 10037880 41 GGACACATTGATCATCGACACTTCGAACGCACTTGCGGCCC GGACACATTGATCATCGACACTTCGAACACACTTGCGGCCC < 41bp 1 0.421431701209883 1 0.281879395246506 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037860 chrY:10037868 . . 0 29 hm5C_associated_SNPs_17369 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037863 + 10037843 10037883 41 CACATTGATCATCGACACTTCGAACGCACTTGCGGCCCGGG CACATTGATCATCGACACTTCGAACACACTTGCGGCCCGGG < 41bp 1 0.13698211010712 1 0.104126513004303 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037863 chrY:10037868 . . 0 26 hm5C_associated_SNPs_17370 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037867 + 10037847 10037887 41 TTGATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCC TTGATCATCGACACTTCGAACACACTTGCGGCCCGGGTTCC < 41bp 1 0.268806918767604 1 0.0610496997833252 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037867 chrY:10037868 . . 0 22 hm5C_associated_SNPs_17371 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chrY 10037868 10037868 1 + G A BRCA 10037869 + 10037849 10037889 41 GATCATCGACACTTCGAACGCACTTGCGGCCCGGGTTCCTC GATCATCGACACTTCGAACACACTTGCGGCCCGGGTTCCTC < 41bp 1 0.356078306469025 1 0.0790374875068665 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TTTY23;NONE ENSG00000251705 ncRNA_exonic Human rRNA chrY:10037869 chrY:10037868 . . 0 20 hm5C_associated_SNPs_17372 0 0 164 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrY:10037867-10037888
64251 chr20 25205861 25205861 1 + C G BRCA 25205875 + 25205855 25205895 41 GAGACACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT GAGACAGAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT < 41bp 1 0.189038481096984 1 0.0313067138195038 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25205875 chr20:25205861 nonsynonymous SNV 0.007 0 7 hm5C_associated_SNPs_17373 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:25205840-25205863
64251 chr8 27369412 27369412 1 + G C BRCA 27369415 + 27369395 27369435 41 AGTGACATGAGCCATGGGTACGTGACAGTAAAGGTGAGTCA AGTGACATGAGCCATGGCTACGTGACAGTAAAGGTGAGTCA < 41bp 1 0.663881022971706 1 0.42305713891983 experiment 0.672237954056589 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27369415 chr8:27369412 synonymous SNV . 0 18 hm5C_associated_SNPs_17374 0 0 8 BUD13 POSTAR2 ENCODE chr8:27369407-27369511
64251 chr11 44129420 44129420 1 + C T BRCA 44129403 + 44129383 44129423 41 GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTTAAA < 41bp 1 0.0343155783003289 1 0.0313878655433655 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129403 chr11:44129420 nonsynonymous SNV 0.801 1 38 hm5C_associated_SNPs_17376 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr11 44129420 44129420 1 + C T BRCA 44129404 + 44129384 44129424 41 GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTTAAAT < 41bp 1 0.0262446903830718 1 0.078388899564743 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129404 chr11:44129420 nonsynonymous SNV 0.801 1 37 hm5C_associated_SNPs_17377 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:44129394-44129434
64251 chr11 61631214 61631214 1 + C G BRCA 61631203 + 61631183 61631223 41 CAGCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG CAGCCACCTGCAACGTGGAGCAGTCCTTCTTGAACGACTGG < 41bp 1 0.0320088902066517 1 0.392595916986465 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61631203 chr11:61631214 nonsynonymous SNV 0.997 2 32 hm5C_associated_SNPs_17379 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61631192-61631224
64251 chr8 21957342 21957342 1 + G A BRCA 21957337 + 21957317 21957357 41 CACAGACCGGCAGCCTGAAGCCCCCGGGGACAACCCCCACA CACAGACCGGCAGCCTGAAGCCCCCAGGGACAACCCCCACA < 41bp 1 0.225289452207969 1 0.0991723239421844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21957337 chr8:21957342 nonsynonymous SNV 0.001 0 26 hm5C_associated_SNPs_17380 0 0 1 DDX24 POSTAR2 ENCODE chr8:21957289-21957345
64251 chr12 133158042 133158042 1 + T A BRCA 133158032 + 133158012 133158052 41 CTGCCCCCCCCAGGTGCCGCCCATCCTGCCTCCAACCCATT CTGCCCCCCCCAGGTGCCGCCCATCCTGCCACCAACCCATT < 41bp 1 0.0126781605764426 1 0.0515947043895721 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBRSL1 ENSG00000112787 CDS Human protein_coding chr12:133158032 chr12:133158042 nonsynonymous SNV 0.637 0 31 hm5C_associated_SNPs_17381 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:133158039-133158063
64251 chr10 5937117 5937117 1 + G T BRCA 5937118 + 5937098 5937138 41 GAGATGCCAGAGGACGAGTGCCCACTTGCTGGTCTTCACAG GAGATGCCAGAGGACGAGTTCCCACTTGCTGGTCTTCACAG < 41bp 1 0.171705383101791 1 0.0814338326454163 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5937118 chr10:5937117 nonsynonymous SNV 0.020 0 20 hm5C_associated_SNPs_17382 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr10:5937104-5937125
64251 chr19 17887068 17887068 1 + C T BRCA 17887060 + 17887040 17887080 41 CCCACTTTGTCCACAGGGCACCATGAAACGCCATTCTTCAC CCCACTTTGTCCACAGGGCACCATGAAATGCCATTCTTCAC < 41bp 1 0.0609758623252691 1 0.0776755213737488 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887060 chr19:17887068 nonsynonymous SNV 0.998 3 29 hm5C_associated_SNPs_17383 0 0 2 PRPF8 POSTAR2 ENCODE chr19:17887023-17887085
64251 chr19 49469846 49469846 1 + G A BRCA 49469831 + 49469811 49469851 41 GTTTCTAATTTCTCCCTCTTCTCTCTCAGCTCTGTGACTTC GTTTCTAATTTCTCCCTCTTCTCTCTCAGCTCTGTAACTTC < 41bp 1 0.266686386629624 1 0.206251710653305 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469831 chr19:49469846 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_17390 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49469820-49469858
64251 chr6 37447030 37447030 1 + C T BRCA 37447022 + 37447002 37447042 41 CCTCCCTGCAGACTCCATTGCCCCATTTCAGTAAGTAGCTC CCTCCCTGCAGACTCCATTGCCCCATTTTAGTAAGTAGCTC < 41bp 1 0.370540374297272 1 0.193838357925415 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37447022 chr6:37447030 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_17391 0 0 6 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr6:37447030-37447031
64251 chr6 37447030 37447030 1 + C T BRCA 37447023 + 37447003 37447043 41 CTCCCTGCAGACTCCATTGCCCCATTTCAGTAAGTAGCTCT CTCCCTGCAGACTCCATTGCCCCATTTTAGTAAGTAGCTCT < 41bp 1 0.0967012212294702 1 0.361104786396027 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37447023 chr6:37447030 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_17392 0 0 6 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr6:37447030-37447031
64251 chr2 202899638 202899638 1 + G C BRCA 202899657 + 202899637 202899677 41 GGTGAAGGTGCAGTGTTCTCCCGAACTCCGCTTTTTCTTAT GCTGAAGGTGCAGTGTTCTCCCGAACTCCGCTTTTTCTTAT < 41bp 1 0.680198498773809 1 0.624996304512024 experiment 0.639603002452382 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899657 chr2:202899638 nonsynonymous SNV 0.989 3 2 hm5C_associated_SNPs_17393 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:202899620-202899640
64251 chr7 151805352 151805352 1 + G T BRCA 151805360 + 151805340 151805380 41 AGGACGAGCGGAGGGAGCCACTGCACCAATAAAGTAAGATC AGGACGAGCGGATGGAGCCACTGCACCAATAAAGTAAGATC < 41bp 1 0.646756921042385 1 0.623843252658844 experiment 0.706486157915231 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805360 chr7:151805352 nonsynonymous SNV 0.478 0 13 hm5C_associated_SNPs_17395 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:151805331-151805366
64251 chr1 230384985 230384985 1 + G A BRCA 230384969 + 230384949 230384989 41 ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCC ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGATCCC < 41bp 1 0.488722458264929 1 0.152366876602173 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384969 chr1:230384985 synonymous SNV . 0 37 hm5C_associated_SNPs_17396 0 0 2 DDX24 POSTAR2 ENCODE chr1:230384960-230385009
64251 chr1 230384985 230384985 1 + G A BRCA 230384971 + 230384951 230384991 41 TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCCGG TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGATCCCGG < 41bp 1 0.254663507110011 1 0.087754875421524 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384971 chr1:230384985 synonymous SNV . 0 35 hm5C_associated_SNPs_17397 0 0 2 DDX24 POSTAR2 ENCODE chr1:230384960-230385009
64251 chr19 13002750 13002750 1 + G C BRCA 13002759 + 13002739 13002779 41 CTGCCAGGAGAGACTCATGCCTCGCATCCTGTTGGCCAATC CTGCCAGGAGACACTCATGCCTCGCATCCTGTTGGCCAATC < 41bp 1 0.598760461342631 1 0.273668467998505 experiment 0.802479077314738 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13002759 chr19:13002750 nonsynonymous SNV 0.861 3 12 hm5C_associated_SNPs_17398 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13002718-13002754
64251 chr2 171807955 171807955 1 + G A BRCA 171807938 + 171807918 171807958 41 CTGTCGAGAAGTGATTATTACACCAAATTCTGCATGGGGTG CTGTCGAGAAGTGATTATTACACCAAATTCTGCATGGAGTG < 41bp 1 0.762470194308043 1 0.476859927177429 experiment 0.475059611383915 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171807938 chr2:171807955 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_17399 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:171807872-171807959
64251 chr2 157407221 157407221 1 + A G BRCA 157407233 + 157407213 157407253 41 GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCCTGGTTAT GCCAGCCAGGTGCTGGTGTCCATATTGTGATGCCTGGTTAT < 41bp 1 0.209906593310228 1 0.269917488098145 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407233 chr2:157407221 nonsynonymous SNV 0.507 2 9 hm5C_associated_SNPs_17400 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157407206-157407230
64251 chr12 131488811 131488811 1 + C T BRCA 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCT < 41bp 1 0.0410808586444623 1 0.0414693653583527 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488811 stopgain 0.001 0 41 hm5C_associated_SNPs_17401 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488811 131488811 1 + C T BRCA 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCTA < 41bp 1 0.229981452417687 1 0.245903998613358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488811 stopgain 0.001 0 40 hm5C_associated_SNPs_17402 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488811 131488811 1 + C T BRCA 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCTAG < 41bp 1 0.63732259699283 1 0.501971244812012 experiment 0.725354806014341 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488811 stopgain 0.001 0 39 hm5C_associated_SNPs_17403 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488811 131488811 1 + C T BRCA 131488795 + 131488775 131488815 41 CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGAT CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCTAGAT < 41bp 1 0.472205901655178 1 0.888536214828491 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488795 chr12:131488811 stopgain 0.001 0 37 hm5C_associated_SNPs_17404 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488811 131488811 1 + C T BRCA 131488799 + 131488779 131488819 41 ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCC ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCTAGATCCCC < 41bp 1 0.332222968268337 1 0.315529435873032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488799 chr12:131488811 stopgain 0.001 0 33 hm5C_associated_SNPs_17405 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr16 46960909 46960909 1 + G A BRCA 46960906 + 46960886 46960926 41 AGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAG AGACTGGCATCTGTGTCGTGCCCAGCAGTGGCTTTGGGCAG < 41bp 1 0.156044305356062 1 0.0632664561271667 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPT2 ENSG00000166123 CDS Human protein_coding chr16:46960906 chr16:46960909 nonsynonymous SNV 0.962 4 24 hm5C_associated_SNPs_17406 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:46960894-46960921
64251 chr9 124062270 124062270 1 + T G BRCA 124062255 + 124062235 124062275 41 GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCG GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGGGCCCG < 41bp 1 0.510182453559563 1 0.659279465675354 experiment 0.979635092880874 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062255 chr9:124062270 nonsynonymous SNV 0.394 1 36 hm5C_associated_SNPs_17407 0 0 6 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062270 124062270 1 + T G BRCA 124062257 + 124062237 124062277 41 GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAG GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGGGCCCGAG < 41bp 1 0.677966509979151 1 0.726703763008118 experiment 0.644066980041698 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062257 chr9:124062270 nonsynonymous SNV 0.394 1 34 hm5C_associated_SNPs_17408 0 0 6 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062270 124062270 1 + T G BRCA 124062258 + 124062238 124062278 41 GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGG GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGGGCCCGAGG < 41bp 1 0.48359623231842 1 0.85528039932251 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062258 chr9:124062270 nonsynonymous SNV 0.394 1 33 hm5C_associated_SNPs_17409 0 0 6 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr10 106014943 106014943 1 + C T BRCA 106014932 + 106014912 106014952 41 CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCGGAGGGC CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTTCCGGAGGGC < 41bp 1 0.781169620288282 1 0.841288864612579 experiment 0.437660759423437 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106014932 chr10:106014943 synonymous SNV . 0 32 hm5C_associated_SNPs_17410 0 0 19 FUS POSTAR2 DRA001158,DRS012384 chr10:106014940-106014997
64251 chr12 124144425 124144425 1 + C T BRCA 124144415 + 124144395 124144435 41 AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCGAA AGTTCATGTTGACTACAGGGCTGCTTGCTTTTGTCATCGAA < 41bp 1 0.330876751571399 1 0.0540709793567657 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144415 chr12:124144425 synonymous SNV . 0 31 hm5C_associated_SNPs_17411 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:124144399-124144429
64251 chr22 46712099 46712099 1 + G C BRCA 46712102 + 46712082 46712122 41 TTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCA TTTCTGAGCTGGCAGCGCAGCAGCTCACGGCACCCCCCTCA < 41bp 1 0.620876098754221 1 0.596578657627106 experiment 0.758247802491558 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712102 chr22:46712099 nonsynonymous SNV 0.006 2 18 hm5C_associated_SNPs_17412 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46712096-46712121
64251 chr19 36104782 36104782 1 + G C BRCA 36104795 + 36104775 36104815 41 TCAAGAAGATCCGGGGAAACCTACTCTGGTAACTGCTTCTT TCAAGAACATCCGGGGAAACCTACTCTGGTAACTGCTTCTT < 41bp 1 0.452931334364951 1 0.103859066963196 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36104795 chr19:36104782 nonsynonymous SNV 0.992 1 8 hm5C_associated_SNPs_17413 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36104753-36104787
64251 chr6 27776369 27776369 1 + A T BRCA 27776384 + 27776364 27776404 41 AGGCGAAGGGCAAGTAGAAGCCTGGATTAGTTTGCAGCAAC AGGCGTAGGGCAAGTAGAAGCCTGGATTAGTTTGCAGCAAC < 41bp 1 0.476131810316929 1 0.554969131946564 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2AI ENSG00000196747 CDS Human protein_coding chr6:27776384 chr6:27776369 stopgain 0.986 1 6 hm5C_associated_SNPs_17415 0 0 69 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27776300-27776437
64251 chr6 27833360 27833360 1 + G C BRCA 27833344 + 27833324 27833364 41 GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCC GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAACACCC < 41bp 1 0.395273598783091 1 0.499826908111572 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833344 chr6:27833360 nonsynonymous SNV 0.997 0 37 hm5C_associated_SNPs_17416 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833358-27833379
64251 chr6 27833360 27833360 1 + G C BRCA 27833345 + 27833325 27833365 41 GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCG GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAACACCCG < 41bp 1 0.428973560100191 1 0.476895838975906 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833345 chr6:27833360 nonsynonymous SNV 0.997 0 36 hm5C_associated_SNPs_17417 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833358-27833379
64251 chr6 29910622 29910622 1 + C T BRCA 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGATAC < 41bp 1 0.633262252323583 1 0.570638537406921 experiment 0.733475495352834 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910622 synonymous SNV . 0 39 hm5C_associated_SNPs_17418 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:29910620-29910640
64251 chr6 29911296 29911296 1 + G A BRCA 29911277 + 29911257 29911297 41 GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACAG < 41bp 1 0.577290581541027 1 0.21406289935112 experiment 0.845418836917946 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911277 chr6:29911296 nonsynonymous SNV 0.032 3 40 hm5C_associated_SNPs_17419 0 0 4 RPS3 POSTAR2 ENCODE chr6:29911278-29911321
64251 chr6 29911296 29911296 1 + G A BRCA 29911278 + 29911258 29911298 41 GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGG GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACAGG < 41bp 1 0.41097082081026 1 0.415480196475983 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911278 chr6:29911296 nonsynonymous SNV 0.032 3 39 hm5C_associated_SNPs_17420 0 0 4 RPS3 POSTAR2 ENCODE chr6:29911278-29911321
64251 chrX 150156319 150156319 1 + A T BRCA 150156311 + 150156291 150156331 41 AAAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG AAAGGGTCCTGCTAAAGTTGCCCGGAAATAGGTGGAAGAGG < 41bp 1 0.476275197858491 1 0.0978497862815857 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156311 chrX:150156319 stopgain 0.998 0 29 hm5C_associated_SNPs_17421 0 0 7 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156319 150156319 1 + A T BRCA 150156312 + 150156292 150156332 41 AAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA AAGGGTCCTGCTAAAGTTGCCCGGAAATAGGTGGAAGAGGA < 41bp 1 0.642378466130349 1 0.618760645389557 experiment 0.715243067739302 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156312 chrX:150156319 stopgain 0.998 0 28 hm5C_associated_SNPs_17422 0 0 7 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156319 150156319 1 + A T BRCA 150156313 + 150156293 150156333 41 AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA AGGGTCCTGCTAAAGTTGCCCGGAAATAGGTGGAAGAGGAA < 41bp 1 0.694855691877095 1 0.746848821640015 experiment 0.61028861624581 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156313 chrX:150156319 stopgain 0.998 0 27 hm5C_associated_SNPs_17423 0 0 7 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chr1 26799995 26799995 1 + G A BRCA 26799987 + 26799967 26800007 41 CTTATAGGCTGAAGGGGATGCTAAGGGAGATAAAGCAAAGG CTTATAGGCTGAAGGGGATGCTAAGGGAAATAAAGCAAAGG < 41bp 1 0.437239956391955 1 0.201743572950363 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN2 ENSG00000198830 CDS Human protein_coding chr1:26799987 chr1:26799995 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_17424 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:26799955-26800032
64251 chr1 26799995 26799995 1 + G A BRCA 26800015 + 26799995 26800035 41 GATAAAGCAAAGGTGAAGGACGAAGTAAGTCATTCTCTCTT AATAAAGCAAAGGTGAAGGACGAAGTAAGTCATTCTCTCTT < 41bp 1 0.553241570004637 1 0.239886492490768 experiment 0.893516859990726 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HMGN2 ENSG00000198830 CDS Human protein_coding chr1:26800015 chr1:26799995 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_17425 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:26799955-26800032
64251 chr19 41778020 41778020 1 + C A BRCA 41778031 + 41778011 41778051 41 GAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC GAGCACCCAACAGCTTCCTCCCGCCTGAAGCTTCTCAACTC < 41bp 1 0.150711287690348 1 0.103825569152832 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41778031 chr19:41778020 nonsynonymous SNV 0.940 0 10 hm5C_associated_SNPs_17426 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41777989-41778041
64251 chr19 41811663 41811663 1 + C A BRCA 41811651 + 41811631 41811671 41 CACAGCCCCACCGCCTCCACCTCCACCACCACCTGCCTACA CACAGCCCCACCGCCTCCACCTCCACCACCACATGCCTACA < 41bp 1 0.596526180412339 1 0.944892525672913 experiment 0.806947639175322 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41811651 chr19:41811663 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_17427 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:41811627-41811687
64251 chr6 44218045 44218045 1 + G A BRCA 44218040 + 44218020 44218060 41 TTACTTAGTTGGAGAAGGAACGAGAGAAGGAAATTAGTGAT TTACTTAGTTGGAGAAGGAACGAGAAAAGGAAATTAGTGAT < 41bp 1 0.788210522311748 1 0.519022345542908 experiment 0.423578955376505 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218040 chr6:44218045 synonymous SNV . 0 26 hm5C_associated_SNPs_17428 0 0 54 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:44218010-44218048
64251 chrX 135593186 135593186 1 + G A BRCA 135593205 + 135593185 135593225 41 TGAGAAGAAGTTTGAAAAGACAGAAGATGGGGGAGAATTTG TAAGAAGAAGTTTGAAAAGACAGAAGATGGGGGAGAATTTG < 41bp 1 0.659011152513965 1 0.328757762908936 experiment 0.681977694972071 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593205 chrX:135593186 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_17431 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:135593156-135593246
64251 chr4 3224137 3224137 1 + G A BRCA 3224157 + 3224137 3224177 41 GAAGAAACTTGGGCCACCCTCCTTGGTGTCCTGGTGACGCA AAAGAAACTTGGGCCACCCTCCTTGGTGTCCTGGTGACGCA < 41bp 1 0.067389694649575 1 0.453809022903442 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3224157 chr4:3224137 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_17433 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:3224111-3224149
64251 chr3 4774890 4774890 1 + A G BRCA 4774884 + 4774864 4774904 41 CCCACTGTCAGCAGGAGGACCCGGCAAGCCCGGGGGAGGAG CCCACTGTCAGCAGGAGGACCCGGCAGGCCCGGGGGAGGAG < 41bp 1 0.131584802821354 1 0.422132074832916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4774884 chr3:4774890 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_17435 0 0 1 PPIG POSTAR2 ENCODE chr3:4774860-4774905
64251 chr6 15496730 15496730 1 + G A BRCA 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCAGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT < 41bp 1 0.0720560958145911 1 0.227693915367126 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496730 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_17436 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr1 215785242 215785242 1 + G C BRCA 215785244 + 215785224 215785264 41 CCAACAAACTATTTGTAAGACTCTCATCGACTGGAAAAAGG CCAACAAACTATTTGTAACACTCTCATCGACTGGAAAAAGG < 41bp 1 0.128692223493742 1 0.0511167049407959 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215785244 chr1:215785242 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_17437 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:215785239-215785259
64251 chr17 7750214 7750214 1 + A C BRCA 7750209 + 7750189 7750229 41 CACCACCACCACCACCACCACCACCACCCCTGCCTGGCCTG CACCACCACCACCACCACCACCACCCCCCCTGCCTGGCCTG < 41bp 1 0.0295644611161399 1 0.301009237766266 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750209 chr17:7750214 synonymous SNV . 0 26 hm5C_associated_SNPs_17438 0 0 1 SF3B1 POSTAR2 ENCODE chr17:7750190-7750231
64251 chr17 7750214 7750214 1 + A C BRCA 7750213 + 7750193 7750233 41 ACCACCACCACCACCACCACCACCCCTGCCTGGCCTGGCTA ACCACCACCACCACCACCACCCCCCCTGCCTGGCCTGGCTA < 41bp 1 0.0402060830634114 1 0.341668754816055 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750213 chr17:7750214 synonymous SNV . 0 22 hm5C_associated_SNPs_17439 0 0 1 SF3B1 POSTAR2 ENCODE chr17:7750190-7750231
64251 chr17 73486391 73486391 1 + G T BRCA 73486373 + 73486353 73486393 41 AGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTG AGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCTTG < 41bp 1 0.452969301389189 1 0.095396876335144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73486373 chr17:73486391 nonsynonymous SNV 0.996 2 39 hm5C_associated_SNPs_17440 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:73486354-73486392
64251 chr5 5464629 5464629 1 + C T BRCA 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCCTGTGTCTGGCCGACTCCCACCCTGTGCATCTGGC < 41bp 1 0.118563535515594 1 0.275304079055786 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464629 nonsynonymous SNV 0.996 3 12 hm5C_associated_SNPs_17444 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr5:5464613-5464634
64251 chr1 10332316 10332316 1 + T C BRCA 10332306 + 10332286 10332326 41 GTATTTATTTTAGGAAGGAGCAAATATTAATAAGTCTCTTA GTATTTATTTTAGGAAGGAGCAAATATTAACAAGTCTCTTA < 41bp 1 0.0472626342761648 1 0.186384111642838 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10332306 chr1:10332316 synonymous SNV . 0 31 hm5C_associated_SNPs_17446 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:10332313-10332348
64251 chr1 10412697 10412697 1 + C T BRCA 10412691 + 10412671 10412711 41 TTTTATCCTTTCTTTTAGGTCGTATTCGGAATAAGCCTGAG TTTTATCCTTTCTTTTAGGTCGTATTTGGAATAAGCCTGAG < 41bp 1 0.0709441734643508 1 0.109027504920959 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10412691 chr1:10412697 nonsynonymous SNV 0.994 4 27 hm5C_associated_SNPs_17447 0 0 1 U2AF2 POSTAR2 ENCODE chr1:10412662-10412730
64251 chrX 69639610 69639610 1 + G A BRCA 69639607 + 69639587 69639627 41 CAGGATTGAGCTTCTTTAATCCCGTCTGTGCCACCCCCAAT CAGGATTGAGCTTCTTTAATCCCATCTGTGCCACCCCCAAT < 41bp 1 0.203813442229292 1 0.0965136587619781 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639607 chrX:69639610 nonsynonymous SNV 0.910 0 24 hm5C_associated_SNPs_17448 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:69639604-69639624
64251 chr6 42986630 42986630 1 + A C BRCA 42986648 + 42986628 42986668 41 CGAAGGGGAAGGGGCCATGTCCCCGCCGGCGCCAGTGCTGC CGCAGGGGAAGGGGCCATGTCCCCGCCGGCGCCAGTGCTGC < 41bp 1 0.515698537302999 1 0.6257603764534 experiment 0.968602925394001 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42986648 chr6:42986630 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_17450 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42986622-42986675
64251 chr17 66033483 66033483 1 + C T BRCA 66033486 + 66033466 66033506 41 TTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTG TTCTCAAGGAAATGAGGTGTCGCAGAATAGAGGTCAATGTG < 41bp 1 0.770419376032383 1 0.239000648260117 experiment 0.459161247935233 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033486 chr17:66033483 nonsynonymous SNV 0.074 3 18 hm5C_associated_SNPs_17451 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033483 66033483 1 + C T BRCA 66033488 + 66033468 66033508 41 CTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTGGA CTCAAGGAAATGAGGTGTCGCAGAATAGAGGTCAATGTGGA < 41bp 1 0.741510343504531 1 0.761599063873291 experiment 0.516979312990939 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033488 chr17:66033483 nonsynonymous SNV 0.074 3 16 hm5C_associated_SNPs_17452 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr12 53343222 53343222 1 - G A BRCA 53343242 - 53343222 53343262 41 TCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGCGGTC TCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGCGGTT < 41bp 1 0.618396346905892 1 0.829068899154663 experiment 0.763207306188215 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53343242 chr12:53343222 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_17453 0 0 2 PRPF8 POSTAR2 ENCODE chr12:53343204-53343277
64251 chr12 52636898 52636898 1 + G C BRCA 52636909 + 52636889 52636929 41 CTGCAGGCTGAGATCGACAACATCAAGAACCAGGTGGGACA CTGCAGGCTCAGATCGACAACATCAAGAACCAGGTGGGACA < 41bp 1 0.34266245481721 1 0.0366370975971222 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KRT7 ENSG00000135480 CDS Human protein_coding chr12:52636909 chr12:52636898 nonsynonymous SNV 0.977 3 10 hm5C_associated_SNPs_17458 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52636880-52636900
64251 chr12 52636898 52636898 1 + G C BRCA 52636912 + 52636892 52636932 41 CAGGCTGAGATCGACAACATCAAGAACCAGGTGGGACAAGT CAGGCTCAGATCGACAACATCAAGAACCAGGTGGGACAAGT < 41bp 1 0.658685475419205 1 0.30838143825531 experiment 0.682629049161591 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KRT7 ENSG00000135480 CDS Human protein_coding chr12:52636912 chr12:52636898 nonsynonymous SNV 0.977 3 7 hm5C_associated_SNPs_17459 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52636880-52636900
64251 chr12 52636898 52636898 1 + G C BRCA 52636918 + 52636898 52636938 41 GAGATCGACAACATCAAGAACCAGGTGGGACAAGTCCTCCT CAGATCGACAACATCAAGAACCAGGTGGGACAAGTCCTCCT < 41bp 1 0.277635788227196 1 0.455006629228592 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KRT7 ENSG00000135480 CDS Human protein_coding chr12:52636918 chr12:52636898 nonsynonymous SNV 0.977 3 1 hm5C_associated_SNPs_17460 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52636880-52636900
64251 chr6 130381217 130381217 1 + G T BRCA 130381222 + 130381202 130381242 41 AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGA AAAAATGGATTCAAATTTGGCATGAAATTAGAAGGCGTGGA < 41bp 1 0.492256861268565 1 0.313899606466293 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381222 chr6:130381217 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_17461 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr1 183094653 183094653 1 + C G BRCA 183094656 + 183094636 183094676 41 GCTTGTGACCCTGGATTCTACAATCTGCAGAGTGGGCAAGG GCTTGTGACCCTGGATTGTACAATCTGCAGAGTGGGCAAGG < 41bp 1 0.166891105479072 1 0.0543555617332458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183094656 chr1:183094653 nonsynonymous SNV 0.973 2 18 hm5C_associated_SNPs_17462 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:183094587-183094662
64251 chr1 87805767 87805767 1 + C T BRCA 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCGCCTGGTCCTGGGAGATCGGTTTCACTACATCAATGGC < 41bp 1 0.375833162587807 1 0.361926257610321 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805767 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_17463 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr19 4793216 4793216 1 + C T BRCA 4793215 + 4793195 4793235 41 CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA CTACGTGCTTCAGGACCGGGCTGCCAAAGGCAGCCTGGGCA < 41bp 1 0.224681517806304 1 0.0790301859378815 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793215 chr19:4793216 synonymous SNV . 0 22 hm5C_associated_SNPs_17464 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4793141-4793239
64251 chr7 5644991 5644991 1 + C T BRCA 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGTGACTA < 41bp 1 0.206772892040934 1 0.100811064243317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644991 synonymous SNV . 0 36 hm5C_associated_SNPs_17465 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr3 66431242 66431242 1 - C T BRCA 66431223 - 66431203 66431243 41 TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT TAGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT < 41bp 1 0.199321661622229 1 0.139126569032669 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431223 chr3:66431242 synonymous SNV . 0 2 hm5C_associated_SNPs_17466 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr3:66431223-66431254
64251 chr2 238664814 238664814 1 + G C BRCA 238664803 + 238664783 238664823 41 TTTGCTGAAGTCAAGGAGGCCCTGAAGCAAAGAGAGGAAAT TTTGCTGAAGTCAAGGAGGCCCTGAAGCAAACAGAGGAAAT < 41bp 1 0.143405654014289 1 0.0940294861793518 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238664803 chr2:238664814 nonsynonymous SNV 0.999 2 32 hm5C_associated_SNPs_17469 0 0 1 PRPF8 POSTAR2 ENCODE chr2:238664790-238664871
64251 chr19 35749935 35749935 1 + A G BRCA 35749925 + 35749905 35749945 41 CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC CCGTGGTCTCAGCCCAGGACCTCCAGGGGAGCAATGAGGCC < 41bp 1 0.758004766372526 1 0.927673101425171 experiment 0.483990467254948 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35749925 chr19:35749935 nonsynonymous SNV 0.987 3 31 hm5C_associated_SNPs_17470 0 0 2 RPS3 POSTAR2 ENCODE chr19:35749895-35749936
64251 chr7 139094326 139094326 1 + G C BRCA 139094319 + 139094299 139094339 41 TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGAAAAGAA TGTTTTTAAGAGAGTCGTAGCTGAGAACCAGGAGAAAAGAA < 41bp 1 0.456820430959303 1 0.335685014724731 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094319 chr7:139094326 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_17471 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:139094297-139094327
64251 chr7 139094326 139094326 1 + G C BRCA 139094341 + 139094321 139094361 41 GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG GAGAACCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG < 41bp 1 0.455979201546698 1 0.407691299915314 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094341 chr7:139094326 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_17472 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:139094297-139094327
64251 chr7 139094321 139094321 1 + G A BRCA 139094319 + 139094299 139094339 41 TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGAAAAGAA TGTTTTTAAGAGAGTCGTAGCTAAGAAGCAGGAGAAAAGAA < 41bp 1 0.347977673558233 1 0.137699246406555 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094319 chr7:139094321 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_17473 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:139094297-139094327
64251 chr7 139094321 139094321 1 + G A BRCA 139094341 + 139094321 139094361 41 GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG AAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG < 41bp 1 0.474426312067298 1 0.436141610145569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094341 chr7:139094321 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_17474 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:139094297-139094327
64251 chr10 102763412 102763412 1 + C T BRCA 102763411 + 102763391 102763431 41 TGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCT TGACGCAGCTGTTTGGGGGCCTTGCCTCCTCCTCCTCCTCT < 41bp 1 0.125523269885337 1 0.0525825619697571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763411 chr10:102763412 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_17475 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr10:102763391-102763422
64251 chr1 39888058 39888058 1 + G C BRCA 39888071 + 39888051 39888091 41 TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGC TCAGAAACAACAAGTGGATCCTCTTCAGATGAAATTGCAGC < 41bp 1 0.0260018723405565 1 0.196841895580292 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39888071 chr1:39888058 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_17476 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:39888040-39888060
64251 chr11 65268662 65268662 1 + G A BRCA 65268671 + 65268651 65268691 41 TGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTC TGTAGAGTTTGAATGTGTAACTGAGGCGGGGGGGAGTTTTC < 41bp 1 0.662206637049908 1 0.342519581317902 experiment 0.675586725900184 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268671 chr11:65268662 . . 0 12 hm5C_associated_SNPs_17477 0 0 81 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65266540-65270640
64251 chr11 65273176 65273176 1 + G A BRCA 65273168 + 65273148 65273188 41 GAGGTCTTTGGTGGGTTGAACTATGTTAGAAAAGGCCATTA GAGGTCTTTGGTGGGTTGAACTATGTTAAAAAAGGCCATTA < 41bp 1 0.591157699699904 1 0.312517106533051 experiment 0.817684600600193 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273168 chr11:65273176 . . 0 29 hm5C_associated_SNPs_17478 0 0 74 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273160-65273220
64251 chr17 12028665 12028665 1 + G T BRCA 12028682 + 12028662 12028702 41 GATGTCTGGAGTTTGGGGATCACATTGGTATGTTTATGCTG GATTTCTGGAGTTTGGGGATCACATTGGTATGTTTATGCTG < 41bp 1 0.427038877043877 1 0.119916349649429 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12028682 chr17:12028665 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_17479 0 0 4 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:12028650-12028672
64251 chr19 40711935 40711935 1 + C T BRCA 40711941 + 40711921 40711961 41 TGGACATCGTGGAACGGGAGCTGCACCTGCTCATGTGCCAG TGGACATCGTGGAATGGGAGCTGCACCTGCTCATGTGCCAG < 41bp 1 0.384010064004797 1 0.195417791604996 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40711941 chr19:40711935 nonsynonymous SNV 0.992 3 15 hm5C_associated_SNPs_17481 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:40711918-40711940
64251 chr16 1793389 1793389 1 + G C BRCA 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACC < 41bp 1 0.172040200897133 1 0.125252962112427 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793389 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_17483 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:1793381-1793394
64251 chr19 18254639 18254639 1 + C T BRCA 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC TAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC < 41bp 1 0.0148217165256762 1 0.0152736604213715 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254639 synonymous SNV . 0 1 hm5C_associated_SNPs_17485 0 0 2 PPIG POSTAR2 ENCODE chr19:18254596-18254696
64251 chr19 7589918 7589918 1 + C A BRCA 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CAACCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC < 41bp 1 0.328947612262314 1 0.150295585393906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589918 nonsynonymous SNV 0.590 1 3 hm5C_associated_SNPs_17486 0 0 1 SF3B1 POSTAR2 ENCODE chr19:7589910-7589942
64251 chr16 21636383 21636383 1 + G C BRCA 21636393 + 21636373 21636413 41 GAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCC GAGCCAACTACAGGCAGGGTCATCCTTGCCCTTGTCCTCCC < 41bp 1 0.324243094660515 1 0.0936958491802216 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL9 ENSG00000197006 CDS Human protein_coding chr16:21636393 chr16:21636383 nonsynonymous SNV 0.995 1 11 hm5C_associated_SNPs_17487 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:21636355-21636427
64251 chr18 19348649 19348649 1 + G C BRCA 19348657 + 19348637 19348677 41 TTGCAGGTGCCAGAGTGGTGCGAGGAGTGGACTGGCAGTGG TTGCAGGTGCCACAGTGGTGCGAGGAGTGGACTGGCAGTGG < 41bp 1 0.750852754389226 1 0.70682030916214 experiment 0.498294491221547 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIB1 ENSG00000101752 CDS Human protein_coding chr18:19348657 chr18:19348649 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_17488 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr18:19348636-19348670
64251 chr18 19348649 19348649 1 + G C BRCA 19348668 + 19348648 19348688 41 AGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGA ACAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGA < 41bp 1 0.616580080322154 1 0.102976202964783 experiment 0.766839839355692 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIB1 ENSG00000101752 CDS Human protein_coding chr18:19348668 chr18:19348649 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_17489 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr18:19348636-19348670
64251 chr2 177015045 177015045 1 + G A BRCA 177015059 + 177015039 177015079 41 TGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTG TGTAACATTGTCTATATATACCCTGTAGAACCGAATTTGTG < 41bp 1 0.344731426783495 1 0.0403048694133759 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015059 chr2:177015045 . . 0 7 hm5C_associated_SNPs_17490 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:177015000-177015060
64251 chr2 177015045 177015045 1 + G A BRCA 177015060 + 177015040 177015080 41 GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGT GTAACATTGTCTATATATACCCTGTAGAACCGAATTTGTGT < 41bp 1 0.146382914599354 1 0.0478179156780243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015060 chr2:177015045 . . 0 6 hm5C_associated_SNPs_17491 0 0 49 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:177015000-177015060
64251 chr11 118344572 118344572 1 + C T BRCA 118344564 + 118344544 118344584 41 AGAGAAAAGGAAAAAGGGATCAGAAATTCAGAGTAGTTCTG AGAGAAAAGGAAAAAGGGATCAGAAATTTAGAGTAGTTCTG < 41bp 1 0.322625020026133 1 0.497882485389709 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344564 chr11:118344572 stopgain 1.000 0 29 hm5C_associated_SNPs_17492 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:118344554-118344575
64251 chr14 61285489 61285489 1 + G C BRCA 61285479 + 61285459 61285499 41 TTGCTCTGCTTTTGGCTCAGCATAAAGATAGATCTACCCAA TTGCTCTGCTTTTGGCTCAGCATAAAGATACATCTACCCAA < 41bp 1 0.374627291067932 1 0.204456686973572 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61285479 chr14:61285489 nonsynonymous SNV 0.879 1 31 hm5C_associated_SNPs_17493 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:61285459-61285522
64251 chr15 75190052 75190052 1 + G A BRCA 75190039 + 75190019 75190059 41 AGCTTACTGAGCCGAAGGACCTGCTGATATTCCGTGCCTGC AGCTTACTGAGCCGAAGGACCTGCTGATATTCCATGCCTGC < 41bp 1 0.577445493032693 1 0.183769911527634 experiment 0.845109013934614 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MPI ENSG00000178802 CDS Human protein_coding chr15:75190039 chr15:75190052 nonsynonymous SNV 0.996 5 34 hm5C_associated_SNPs_17494 1 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:75190015-75190069
64251 chr3 47041682 47041682 1 + G C BRCA 47041673 + 47041653 47041693 41 CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGGATCAGGC CCTTTGACCTGGGCCTGGAACGGTCTAGTCTAGGATCAGGC < 41bp 1 0.120541933511554 1 0.686111867427826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041673 chr3:47041682 nonsynonymous SNV 0.259 0 30 hm5C_associated_SNPs_17500 0 0 1 EIF3H POSTAR2 ENCODE chr3:47041678-47041705
64251 chr12 6637440 6637440 1 + T C BRCA 6637450 + 6637430 6637470 41 ACTGGGGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC ACTGGGGATCCGGCCATCCGCTTTCCCAATCTGGTGGACCC < 41bp 1 0.0915481114545715 1 0.0652382969856262 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637450 chr12:6637440 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_17501 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:6637390-6637461
64251 chr3 179341750 179341750 1 + A G BRCA 179341758 + 179341738 179341778 41 GCATGTGAGAGGAGATGGACCCTGGTATTACTATGAGACAA GCATGTGAGAGGGGATGGACCCTGGTATTACTATGAGACAA < 41bp 1 0.622514730307865 1 0.396362721920013 experiment 0.754970539384269 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179341758 chr3:179341750 nonsynonymous SNV 0.608 1 13 hm5C_associated_SNPs_17502 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr3:179341721-179341764
64251 chr18 56063421 56063421 1 + C G BRCA 56063414 + 56063394 56063434 41 TGCAGCTTTAATCGCCTTGACTTACCTCCATATGAAACCTT TGCAGCTTTAATCGCCTTGACTTACCTGCATATGAAACCTT < 41bp 1 0.0410890881830614 1 0.0631028413772583 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:56063414 chr18:56063421 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_17503 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:56063398-56063428
64251 chr10 5495482 5495482 1 + G A BRCA 5495471 + 5495451 5495491 41 GTTGACAAGAATAGGAGAAGCAACCAAGCCTGATGGAACAG GTTGACAAGAATAGGAGAAGCAACCAAGCCTAATGGAACAG < 41bp 1 0.362142677465337 1 0.235346704721451 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NET1 ENSG00000173848 CDS Human protein_coding chr10:5495471 chr10:5495482 nonsynonymous SNV 0.955 0 32 hm5C_associated_SNPs_17504 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:5495448-5495490
64251 chr17 46128581 46128581 1 + C G BRCA 46128578 + 46128558 46128598 41 GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCC GGACGTGGATACTTACCTGACCTGACAGCTTCCCCCACTCC < 41bp 1 0.328745194476091 1 0.0423019826412201 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128578 chr17:46128581 stopgain 1.000 1 24 hm5C_associated_SNPs_17505 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr17 46128581 46128581 1 + C G BRCA 46128592 + 46128572 46128612 41 ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG ACCTGACCTGACAGCTTCCCCCACTCCGGGAGATCATCCTG < 41bp 1 0.159160210128899 1 0.152371197938919 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128592 chr17:46128581 stopgain 1.000 1 10 hm5C_associated_SNPs_17506 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr5 36985782 36985782 1 + C T BRCA 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCGACATTGAGGGGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.116149448419462 1 0.0334883332252502 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985782 stopgain 0.996 1 12 hm5C_associated_SNPs_17507 1 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:36985753-36985813
64251 chr1 161088976 161088976 1 + G A BRCA 161088961 + 161088941 161088981 41 TCTCCTCTTCCTCCTGCGAACTGCCCCTGGTGGCTGTGTGC TCTCCTCTTCCTCCTGCGAACTGCCCCTGGTGGCTATGTGC < 41bp 1 0.330407995522493 1 0.0770897567272186 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088961 chr1:161088976 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_17508 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161088960-161088980
64251 chr9 35792578 35792578 1 + G A BRCA 35792598 + 35792578 35792618 41 GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG AGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG < 41bp 1 0.539771272648462 1 0.512213706970215 experiment 0.920457454703077 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792598 chr9:35792578 nonsynonymous SNV 0.998 0 1 hm5C_associated_SNPs_17509 0 0 2 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr8 126194375 126194375 1 + G C BRCA 126194360 + 126194340 126194380 41 CTTAGGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTA CTTAGGTGAAAGAAGAACGTCCAGAAAAAATACCACATTTA < 41bp 1 0.35671482800105 1 0.212211430072784 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126194360 chr8:126194375 nonsynonymous SNV 0.954 4 36 hm5C_associated_SNPs_17510 0 0 1 ZNF622 POSTAR2 ENCODE chr8:126194342-126194409
64251 chr7 2290629 2290629 1 + C T BRCA 2290643 + 2290623 2290663 41 TGGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAG TGGACATGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAG < 41bp 1 0.649209575418831 1 0.322963535785675 experiment 0.701580849162337 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2290643 chr7:2290629 nonsynonymous SNV 0.001 0 7 hm5C_associated_SNPs_17511 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr7 2290629 2290629 1 + C T BRCA 2290644 + 2290624 2290664 41 GGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGG GGACATGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGG < 41bp 1 0.760820957468267 1 0.833833575248718 experiment 0.478358085063466 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2290644 chr7:2290629 nonsynonymous SNV 0.001 0 6 hm5C_associated_SNPs_17512 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr12 69082816 69082816 1 + C G BRCA 69082818 + 69082798 69082838 41 CTGCACGGAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC CTGCACGGAAACAGAGTGGTCAGAAAAGAGTTTTACGTATC < 41bp 1 0.715439079593877 1 0.464072585105896 experiment 0.569121840812245 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69082818 chr12:69082816 nonsynonymous SNV 0.996 2 19 hm5C_associated_SNPs_17513 0 0 6 DDX24 POSTAR2 ENCODE chr12:69082743-69082820
64251 chr7 23239963 23239963 1 + G C BRCA 23239949 + 23239929 23239969 41 AGGTATCTCTACTTCTGCTCCAGCTTTTGGATTTGGGAAGC AGGTATCTCTACTTCTGCTCCAGCTTTTGGATTTCGGAAGC < 41bp 1 0.623549643157954 1 0.153446406126022 experiment 0.752900713684093 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23239949 chr7:23239963 nonsynonymous SNV 0.999 0 35 hm5C_associated_SNPs_17514 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23239945-23239981
64251 chr12 58114298 58114298 1 + C T BRCA 58114286 + 58114266 58114306 41 ACGAGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAG ACGAGAAACCTCAAGGAGATCTTCTTCAATATTTTGGTAAG < 41bp 1 0.353696550567407 1 0.0667219460010529 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58114286 chr12:58114298 synonymous SNV . 0 33 hm5C_associated_SNPs_17516 0 0 8 DDX6 POSTAR2 ENCODE chr12:58114296-58114301
64251 chr12 58114298 58114298 1 + C T BRCA 58114289 + 58114269 58114309 41 AGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAGAGG AGAAACCTCAAGGAGATCTTCTTCAATATTTTGGTAAGAGG < 41bp 1 0.528906425114208 1 0.740516245365143 experiment 0.942187149771583 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58114289 chr12:58114298 synonymous SNV . 0 30 hm5C_associated_SNPs_17517 0 0 8 DDX6 POSTAR2 ENCODE chr12:58114296-58114301
64251 chr20 3888593 3888593 1 + G C BRCA 3888598 + 3888578 3888618 41 CCATGGTTTGGACTGGATATCGGTGGAACTCTGGTCAAGCT CCATGGTTTGGACTGCATATCGGTGGAACTCTGGTCAAGCT < 41bp 1 0.603173934793086 1 0.710408687591553 experiment 0.793652130413828 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888598 chr20:3888593 nonsynonymous SNV 1.000 5 16 hm5C_associated_SNPs_17518 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:3888579-3888600
64251 chr11 65389721 65389721 1 + G T BRCA 65389719 + 65389699 65389739 41 CCCTGCACGAATCCCAGGAGCAGACACTGATGGAAGAAGCG CCCTGCACGAATCCCAGGAGCATACACTGATGGAAGAAGCG < 41bp 1 0.0138765699520809 1 0.181358933448792 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65389719 chr11:65389721 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_17521 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65389719-65389763
64251 chr10 105179384 105179384 1 + C T BRCA 105179366 + 105179346 105179386 41 CCCAAGAACTTCTCAGAAATCCATCCTGGAATGCTGCTCAT CCCAAGAACTTCTCAGAAATCCATCCTGGAATGCTGCTTAT < 41bp 1 0.0623419434801538 1 0.170932948589325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105179366 chr10:105179384 synonymous SNV . 0 39 hm5C_associated_SNPs_17522 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:105179352-105179442
64251 chrX 19373834 19373834 1 + G A BRCA 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCCGAAAGGCAACAAGGTTTGCTGCTGCCT < 41bp 1 0.658117305635708 1 0.229483604431152 experiment 0.683765388728585 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373834 nonsynonymous SNV 0.998 5 17 hm5C_associated_SNPs_17523 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:19373807-19373834
64251 chrX 19373844 19373844 1 + G A BRCA 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCCGAGAGGCAACAAAGTTTGCTGCTGCCT < 41bp 1 0.607946295315388 1 0.336463510990143 experiment 0.784107409369224 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373844 nonsynonymous SNV 0.997 1 27 hm5C_associated_SNPs_17524 0 0 7 DDX24 POSTAR2 ENCODE chrX:19373815-19373881
64251 chr1 249210807 249210807 1 + C G BRCA 249210825 + 249210805 249210845 41 GTCATTGCTGGGAGAGGTATCCACTCAAAGGTGAAGTCTGC GTGATTGCTGGGAGAGGTATCCACTCAAAGGTGAAGTCTGC < 41bp 1 0.200342707820842 1 0.329012274742126 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249210825 chr1:249210807 synonymous SNV . 0 3 hm5C_associated_SNPs_17526 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:249210800-249210820
64251 chrX 77378415 77378415 1 + T C BRCA 77378418 + 77378398 77378438 41 TGGTGGTGGAATGGCTTTTACCTTCCTTAAGGTGCTCAACA TGGTGGTGGAATGGCTTCTACCTTCCTTAAGGTGCTCAACA < 41bp 1 0.0241625438497796 1 0.171668648719788 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378418 chrX:77378415 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_17527 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:77378385-77378421
64251 chr1 6681554 6681554 1 + A C BRCA 6681570 + 6681550 6681590 41 CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT CCACCCCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT < 41bp 1 0.176752934151103 1 0.244434028863907 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681570 chr1:6681554 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_17529 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:6681530-6681564
64251 chr11 118516531 118516531 1 + C A BRCA 118516515 + 118516495 118516535 41 GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGG GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTAATGG < 41bp 1 0.596430631809079 1 0.724093496799469 experiment 0.807138736381842 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516515 chr11:118516531 synonymous SNV . 0 37 hm5C_associated_SNPs_17530 0 0 6 EFTUD2 POSTAR2 ENCODE chr11:118516499-118516552
64251 chr20 43243339 43243339 1 + G A BRCA 43243326 + 43243306 43243346 41 AAGCTGGCTGGAGACATGGGCGAGCTGGCACTCGAGGGGGC AAGCTGGCTGGAGACATGGGCGAGCTGGCACTCAAGGGGGC < 41bp 1 0.641685655015789 1 0.482089698314667 experiment 0.716628689968421 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKIG ENSG00000168734 CDS Human protein_coding chr20:43243326 chr20:43243339 nonsynonymous SNV 0.092 1 34 hm5C_associated_SNPs_17531 0 0 2 GRWD1 POSTAR2 ENCODE chr20:43243280-43243351
64251 chr14 68042162 68042162 1 + C G BRCA 68042177 + 68042157 68042197 41 ATCTTCTACTACTATCGGAGCCATGAGGACAAGGTACTTCT ATCTTGTACTACTATCGGAGCCATGAGGACAAGGTACTTCT < 41bp 1 0.0434764212395363 1 0.137944012880325 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68042177 chr14:68042162 nonsynonymous SNV 0.995 1 6 hm5C_associated_SNPs_17532 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr14:68042157-68042185
64251 chr14 68042170 68042170 1 + A C BRCA 68042177 + 68042157 68042197 41 ATCTTCTACTACTATCGGAGCCATGAGGACAAGGTACTTCT ATCTTCTACTACTCTCGGAGCCATGAGGACAAGGTACTTCT < 41bp 1 0.0421682300964795 1 0.0932303667068481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68042177 chr14:68042170 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_17533 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:68042157-68042185
64251 chr3 126739137 126739137 1 + C T BRCA 126739145 + 126739125 126739165 41 ACATATGCCATGCGGGTGCTCTTTCCTGGGATCGAGGACCA ACATATGCCATGTGGGTGCTCTTTCCTGGGATCGAGGACCA < 41bp 1 0.0666547763107687 1 0.126771122217178 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126739145 chr3:126739137 nonsynonymous SNV 0.981 4 13 hm5C_associated_SNPs_17536 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126739128-126739154
64251 chr12 94563009 94563009 1 + C T BRCA 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTTTATGGTACCGTGGTAAT < 41bp 1 0.0498712588937968 1 0.101394027471542 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563009 synonymous SNV . 0 30 hm5C_associated_SNPs_17539 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr1 166819226 166819226 1 + G A BRCA 166819242 + 166819222 166819262 41 TCTTGAATGGCTTCCGGGGCCATGCCACAGATTCCGTGAAG TCTTAAATGGCTTCCGGGGCCATGCCACAGATTCCGTGAAG < 41bp 1 0.229798734981493 1 0.178959399461746 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166819242 chr1:166819226 synonymous SNV . 0 5 hm5C_associated_SNPs_17544 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:166819220-166819260
64251 chr13 28197146 28197146 1 + C T BRCA 28197130 + 28197110 28197150 41 TTGTATTGCACGAGGAAGACCATACCCTAGGAAATTCTCTA TTGTATTGCACGAGGAAGACCATACCCTAGGAAATTTTCTA < 41bp 1 0.0318521006278592 1 0.237896472215652 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197130 chr13:28197146 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_17545 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:28197073-28197156
64251 chr3 184082777 184082777 1 + G A BRCA 184082795 + 184082775 184082815 41 GTGAATCTTTCAAGATGGATCTAATCTTAGATGTAAACATT GTAAATCTTTCAAGATGGATCTAATCTTAGATGTAAACATT < 41bp 1 0.20229360662664 1 0.0535378754138947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2H ENSG00000163882 CDS Human protein_coding chr3:184082795 chr3:184082777 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_17546 0 0 26 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184082730-184082792
64251 chr16 22337444 22337444 1 + C T BRCA 22337437 + 22337417 22337457 41 CTGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGTTTGT CTGAAGGCCTTCGTGGAGGCCACCTTTTAGAGACAGTTTGT < 41bp 1 0.342551713814561 1 0.0916182398796082 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337437 chr16:22337444 stopgain 0.998 0 28 hm5C_associated_SNPs_17547 0 0 8 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:22337423-22337446
64251 chr2 242089920 242089920 1 + G A BRCA 242089903 + 242089883 242089923 41 GATTCCGGAAAGGGGAAGAGCAGCCAACATGGCGGCGGAAC GATTCCGGAAAGGGGAAGAGCAGCCAACATGGCGGCGAAAC < 41bp 1 0.4568021559539 1 0.684814929962158 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242089903 chr2:242089920 nonsynonymous SNV 0.999 0 38 hm5C_associated_SNPs_17549 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:242089900-242089920
64251 chr8 26227655 26227655 1 + T A BRCA 26227656 + 26227636 26227676 41 GTCTATTTTCACAGTGTTGTCATGACTGGATCTTACAATAA GTCTATTTTCACAGTGTTGACATGACTGGATCTTACAATAA < 41bp 1 0.414597842940546 1 0.0731663107872009 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227656 chr8:26227655 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_17550 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:26227614-26227725
64251 chr14 35579802 35579802 1 - A C BRCA 35579783 - 35579763 35579803 41 ATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAA AGTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAA < 41bp 1 0.241454519465706 1 0.164282709360123 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP2R3C ENSG00000092020 CDS Human protein_coding chr14:35579783 chr14:35579802 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_17551 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:35579799-35579820
64251 chr9 131897091 131897091 1 + G T BRCA 131897102 + 131897082 131897122 41 GCAGCCTTCGCTGCTTTCCTCTGCTGTCTCTGCAAGATTGG GCAGCCTTCTCTGCTTTCCTCTGCTGTCTCTGCAAGATTGG < 41bp 1 0.484852920531142 1 0.217782258987427 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPA ENSG00000119383 CDS Human protein_coding chr9:131897102 chr9:131897091 nonsynonymous SNV 0.998 3 10 hm5C_associated_SNPs_17552 0 0 1 RPS3 POSTAR2 ENCODE chr9:131897084-131897138
64251 chr10 103906618 103906618 1 + A G BRCA 103906635 + 103906615 103906655 41 TCCATGTGGGCTCTGGGGACCATGACTATTGTGTCCGGAGC TCCGTGTGGGCTCTGGGGACCATGACTATTGTGTCCGGAGC < 41bp 1 0.38482112696703 1 0.226377189159393 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906635 chr10:103906618 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_17553 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:103906600-103906620
64251 chrX 48759265 48759265 1 + G A BRCA 48759267 + 48759247 48759287 41 TCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCAA TCCTGGCTCTCCCCACATAACCCCAACTCCGTGGTTACCAA < 41bp 1 0.746225410319309 1 0.195550888776779 experiment 0.507549179361382 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759267 chrX:48759265 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_17554 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr20 33764038 33764038 1 + C A BRCA 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTATTCGAAGTGGCTGTGAATGGGAG < 41bp 1 0.775504414700366 1 0.886872172355652 experiment 0.448991170599267 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764038 nonsynonymous SNV 0.996 4 18 hm5C_associated_SNPs_17555 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chrX 106893241 106893241 1 + A G BRCA 106893248 + 106893228 106893268 41 CCGTTTCTTACCTATTCAGCCATGTCCCTTTATAATAGAGT CCGTTTCTTACCTGTTCAGCCATGTCCCTTTATAATAGAGT < 41bp 1 0.0658731453481421 1 0.177348375320435 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893248 chrX:106893241 synonymous SNV . 0 14 hm5C_associated_SNPs_17556 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 106893241 106893241 1 + A G BRCA 106893253 + 106893233 106893273 41 TCTTACCTATTCAGCCATGTCCCTTTATAATAGAGTAACTT TCTTACCTGTTCAGCCATGTCCCTTTATAATAGAGTAACTT < 41bp 1 0.105442663154219 1 0.0657326579093933 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893253 chrX:106893241 synonymous SNV . 0 9 hm5C_associated_SNPs_17557 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chr19 50096688 50096688 1 + A C BRCA 50096691 + 50096671 50096711 41 CTATGCCACCAACCACCACCCGGCAGGTACGGCCCCCATCC CTATGCCACCAACCACCCCCCGGCAGGTACGGCCCCCATCC < 41bp 1 0.698253308882043 1 0.904342353343964 experiment 0.603493382235913 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR12 ENSG00000126464 CDS Human protein_coding chr19:50096691 chr19:50096688 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_17558 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:50096665-50096693
64251 chr1 151006389 151006389 1 + T C BRCA 151006407 + 151006387 151006427 41 TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC TCCCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC < 41bp 1 0.134630788975821 1 0.0546343624591827 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006407 chr1:151006389 synonymous SNV . 0 3 hm5C_associated_SNPs_17568 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151006384-151006410
64251 chr14 53173920 53173920 1 + G A BRCA 53173926 + 53173906 53173946 41 CCGGCATCCCCTATGAGAGACGGCTTCTCATCATGGCGGAC CCGGCATCCCCTATAAGAGACGGCTTCTCATCATGGCGGAC < 41bp 1 0.539407766416955 1 0.138485729694366 experiment 0.921184467166089 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53173926 chr14:53173920 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_17569 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:53173920-53173940
64251 chr2 232035376 232035376 1 + G A BRCA 232035362 + 232035342 232035382 41 ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAAC ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGAAGGAAC < 41bp 1 0.582184714983364 1 0.122526586055756 experiment 0.835630570033272 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232035362 chr2:232035376 nonsynonymous SNV 0.998 1 35 hm5C_associated_SNPs_17570 0 0 2 SRSF1 POSTAR2 ENCODE chr2:232035320-232035387
64251 chr19 808581 808581 1 + A G BRCA 808586 + 808566 808606 41 CACAAGCTGCACGGGAAGCCCATCCGCATCACGCTCTCGAA CACAAGCTGCACGGGGAGCCCATCCGCATCACGCTCTCGAA < 41bp 1 0.263294974710837 1 0.157258212566376 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808586 chr19:808581 nonsynonymous SNV 0.756 3 16 hm5C_associated_SNPs_17571 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:808575-808596
64251 chr11 489687 489687 1 + G A BRCA 489680 + 489660 489700 41 CTCCTGCGGCTCGTCTTCTTCGTGAACGTGGGTGGCGTGGC CTCCTGCGGCTCGTCTTCTTCGTGAACATGGGTGGCGTGGC < 41bp 1 0.723926336206892 1 0.908969163894653 experiment 0.552147327586215 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:489680 chr11:489687 nonsynonymous SNV 0.989 1 28 hm5C_associated_SNPs_17572 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:489672-489727
64251 chr12 6879111 6879111 1 + G T BRCA 6879124 + 6879104 6879144 41 TGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGG TGAGGAGTAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGG < 41bp 1 0.342489804347228 1 0.35182797908783 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6879124 chr12:6879111 stopgain 0.996 0 8 hm5C_associated_SNPs_17573 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6879080-6879120
64251 chr12 6879111 6879111 1 + G T BRCA 6879127 + 6879107 6879147 41 GGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAG GGAGTAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAG < 41bp 1 0.319291270434687 1 0.559151589870453 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMS ENSG00000159335 CDS Human protein_coding chr12:6879127 chr12:6879111 stopgain 0.996 0 5 hm5C_associated_SNPs_17574 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6879080-6879120
64251 chr12 6879111 6879111 1 + G T BRCA 6879128 + 6879108 6879148 41 GAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAGA GAGTAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAGA < 41bp 1 0.709902083773447 1 0.811845302581787 experiment 0.580195832453106 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6879128 chr12:6879111 stopgain 0.996 0 4 hm5C_associated_SNPs_17575 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6879080-6879120
64251 chr3 61975361 61975361 1 + C G BRCA 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTGCTATTGAC < 41bp 1 0.161064119443207 1 0.33543199300766 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975361 nonsynonymous SNV 0.998 5 33 hm5C_associated_SNPs_17576 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr15 41021711 41021711 1 + T G BRCA 41021710 + 41021690 41021730 41 TTGTTTCCTGTAGGTATGCACTGCTTATTGTAGACAGTGCC TTGTTTCCTGTAGGTATGCACGGCTTATTGTAGACAGTGCC < 41bp 1 0.300269402738334 1 0.271614789962769 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAD51 ENSG00000051180 CDS Human protein_coding chr15:41021710 chr15:41021711 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_17577 0 0 1 YBX3 POSTAR2 ENCODE chr15:41021701-41021736
64251 chr2 109347330 109347330 1 + G A BRCA 109347326 + 109347306 109347346 41 GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG GAAGAAAACACAGACAAAGCCGTTAAATGTTACAGGGTAAG < 41bp 1 0.121461625152085 1 0.127247840166092 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347326 chr2:109347330 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_17578 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109347298-109347338
64251 chr3 25542765 25542765 1 + C A BRCA 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGACAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.256733970937904 1 0.0839190781116486 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542765 stopgain 0.999 1 15 hm5C_associated_SNPs_17579 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr3 50091809 50091809 1 + C G BRCA 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCACCGATCTTCCTGTTCATTGTGCAAGAACCCAAGAG < 41bp 1 0.181722335716741 1 0.0495773255825043 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091809 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_17580 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:50091779-50091819
64251 chr1 145507682 145507682 1 + G A BRCA 145507671 + 145507651 145507691 41 CTCGATCGAAGGCGAGATGGCGGACGTGCTAGATCTTCACG CTCGATCGAAGGCGAGATGGCGGACGTGCTAAATCTTCACG < 41bp 1 0.269069442884949 1 0.161684334278107 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RBM8A ENSG00000131795 CDS Human other chr1:145507671 chr1:145507682 nonsynonymous SNV . 0 32 hm5C_associated_SNPs_17581 0 0 4 GRWD1 POSTAR2 ENCODE chr1:145507676-145507735
64251 chr1 145663210 145663210 1 + C G BRCA 145663218 + 145663198 145663238 41 TTTAGACCCTTTCTAAGTAGCAGTCCACTGGACCAAGATAA TTTAGACCCTTTGTAAGTAGCAGTCCACTGGACCAAGATAA < 41bp 1 0.0716153342261533 1 0.127664566040039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663218 chr1:145663210 nonsynonymous SNV . 0 13 hm5C_associated_SNPs_17582 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663201-145663221
64251 chr1 28975130 28975130 1 + G T BRCA 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTTAGTGGCACACGTAGGGCAACTCGATTGCTC < 41bp 1 0.574684393109853 1 0.232621371746063 experiment 0.850631213780293 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975130 . . 0 11 hm5C_associated_SNPs_17583 0 0 57 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:28975100-28975140
64251 chr1 28975208 28975208 1 + T C BRCA 28975227 + 28975207 28975247 41 GTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC GCATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTC < 41bp 1 0.654596998602342 1 0.358381509780884 experiment 0.690806002795316 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975227 chr1:28975208 . . 0 2 hm5C_associated_SNPs_17584 0 0 200 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:28975194-28975224
64251 chrX 153628228 153628228 1 + A C BRCA 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGCTCCCCCCCTTCCACGTCATCCGCAT < 41bp 1 0.345152050163738 1 0.049138605594635 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628228 nonsynonymous SNV 0.971 1 20 hm5C_associated_SNPs_17585 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr17 37358625 37358625 1 + G A BRCA 37358628 + 37358608 37358648 41 ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG ATCCGCAAGCCTGTGACAGTCCATTCCCGGGCTCGATGCCG < 41bp 1 0.157690885225989 1 0.0465043783187866 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358628 chr17:37358625 synonymous SNV . 0 18 hm5C_associated_SNPs_17587 0 0 1 YBX3 POSTAR2 ENCODE chr17:37358622-37358636
64251 chr17 37359326 37359326 1 + G A BRCA 37359313 + 37359293 37359333 41 TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATAC TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAAAAGATAC < 41bp 1 0.766897515571667 1 0.0775459110736847 experiment 0.466204968856665 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359313 chr17:37359326 nonsynonymous SNV 0.381 1 34 hm5C_associated_SNPs_17588 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359326 37359326 1 + G A BRCA 37359316 + 37359296 37359336 41 GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGT GGAGAATGAGGATTTTGCGCCGGCTGCTCAAAAGATACCGT < 41bp 1 0.393783890965753 1 0.322026312351227 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359316 chr17:37359326 nonsynonymous SNV 0.381 1 31 hm5C_associated_SNPs_17589 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359326 37359326 1 + G A BRCA 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGCGCCGGCTGCTCAAAAGATACCGTGAA < 41bp 1 0.352475440338536 1 0.194762617349625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359326 nonsynonymous SNV 0.381 1 28 hm5C_associated_SNPs_17590 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359326 37359326 1 + G A BRCA 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGCGCCGGCTGCTCAAAAGATACCGTGAATCT < 41bp 1 0.659949992911024 1 0.356244444847107 experiment 0.680100014177953 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359326 nonsynonymous SNV 0.381 1 25 hm5C_associated_SNPs_17591 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359326 37359326 1 + G A BRCA 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCTGCTCAAAAGATACCGTGAATCTAAGAAGATCGA < 41bp 1 0.179738564694412 1 0.0873980224132538 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359326 nonsynonymous SNV 0.381 1 14 hm5C_associated_SNPs_17592 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359326 37359326 1 + G A BRCA 37359334 + 37359314 37359354 41 GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGAT GCCGGCTGCTCAAAAGATACCGTGAATCTAAGAAGATCGAT < 41bp 1 0.701868354383825 1 0.220239371061325 experiment 0.59626329123235 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359334 chr17:37359326 nonsynonymous SNV 0.381 1 13 hm5C_associated_SNPs_17593 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr1 26885381 26885381 1 + G A BRCA 26885380 + 26885360 26885400 41 GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC GCCACCGGCCTGATGGAAGACAACGGCAAGCCTCGTGCCCC < 41bp 1 0.719865813826636 1 0.443061232566833 experiment 0.560268372346727 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885380 chr1:26885381 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_17596 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr11 67202569 67202569 1 + G A BRCA 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCA < 41bp 1 0.749871289151134 1 0.666049718856812 experiment 0.500257421697731 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202569 nonsynonymous SNV 0.422 0 41 hm5C_associated_SNPs_17597 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202569 67202569 1 + G A BRCA 67202551 + 67202531 67202571 41 TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCC TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCACC < 41bp 1 0.305016937951352 1 0.335906267166138 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202551 chr11:67202569 nonsynonymous SNV 0.422 0 39 hm5C_associated_SNPs_17598 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202569 67202569 1 + G A BRCA 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCACCCCTC < 41bp 1 0.599558039277473 1 0.157609492540359 experiment 0.800883921445054 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202569 nonsynonymous SNV 0.422 0 35 hm5C_associated_SNPs_17599 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202530 67202530 1 + C G BRCA 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TGTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG < 41bp 1 0.741535637866872 1 0.588360667228699 experiment 0.516928724266256 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202530 nonsynonymous SNV 0.703 0 2 hm5C_associated_SNPs_17600 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202482-67202537
64251 chr20 62311271 62311271 1 + G A BRCA 62311284 + 62311264 62311304 41 ACTCGCTGGACCAGATCATCCAGCACCTGGCAGGACGTGAG ACTCGCTAGACCAGATCATCCAGCACCTGGCAGGACGTGAG < 41bp 1 0.708349482550368 1 0.686180830001831 experiment 0.583301034899264 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62311284 chr20:62311271 synonymous SNV . 0 8 hm5C_associated_SNPs_17602 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:62311239-62311275
64251 chr12 6619500 6619500 1 + C T BRCA 6619484 + 6619464 6619504 41 TGTAATCTTGGTGGGCGATACAGAGTTATGTGTGTTCACTG TGTAATCTTGGTGGGCGATACAGAGTTATGTGTGTTTACTG < 41bp 1 0.512022977219756 1 0.584633469581604 experiment 0.975954045560489 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619484 chr12:6619500 . . 0 37 hm5C_associated_SNPs_17604 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr12 6619500 6619500 1 + C T BRCA 6619502 + 6619482 6619522 41 TACAGAGTTATGTGTGTTCACTGTAAGGGCAGACCAACAAG TACAGAGTTATGTGTGTTTACTGTAAGGGCAGACCAACAAG < 41bp 1 0.514511427952229 1 0.287623196840286 experiment 0.970977144095542 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619502 chr12:6619500 . . 0 19 hm5C_associated_SNPs_17605 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr12 6619500 6619500 1 + C T BRCA 6619511 + 6619491 6619531 41 ATGTGTGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTC ATGTGTGTTTACTGTAAGGGCAGACCAACAAGAACTTTTTC < 41bp 1 0.105642855791083 1 0.357156366109848 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619511 chr12:6619500 . . 0 10 hm5C_associated_SNPs_17606 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr12 6619500 6619500 1 + C T BRCA 6619515 + 6619495 6619535 41 GTGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTAC GTGTTTACTGTAAGGGCAGACCAACAAGAACTTTTTCCTAC < 41bp 1 0.052281218509063 1 0.204521417617798 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619515 chr12:6619500 . . 0 6 hm5C_associated_SNPs_17607 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr12 6619500 6619500 1 + C T BRCA 6619516 + 6619496 6619536 41 TGTTCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACT TGTTTACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACT < 41bp 1 0.476032966291178 1 0.571803748607635 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619516 chr12:6619500 . . 0 5 hm5C_associated_SNPs_17608 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr12 6619500 6619500 1 + C T BRCA 6619519 + 6619499 6619539 41 TCACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACTTTT TTACTGTAAGGGCAGACCAACAAGAACTTTTTCCTACTTTT < 41bp 1 0.425181851886804 1 0.296250522136688 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCARNA10 ENSG00000239002 ncRNA_exonic Human snoRNA chr12:6619519 chr12:6619500 . . 0 2 hm5C_associated_SNPs_17609 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6619454-6619508
64251 chr1 109643088 109643088 1 + G A BRCA 109643068 + 109643048 109643088 41 AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCA < 41bp 1 0.149581362581603 1 0.199921041727066 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643068 chr1:109643088 . . 0 41 hm5C_associated_SNPs_17610 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCAAGGCCCCTT < 41bp 1 0.707378052975684 1 0.0647753775119781 experiment 0.585243894048633 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643088 . . 0 32 hm5C_associated_SNPs_17611 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643087 + 109643067 109643107 41 CCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGC CCCCTCGGGGCGCTGTGCAGCAAGGCCCCTTAGGCGGCGGC < 41bp 1 0.747560746947974 1 0.880184650421143 experiment 0.504878506104052 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643087 chr1:109643088 . . 0 22 hm5C_associated_SNPs_17612 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGGGCGCTGTGCAGCAAGGCCCCTTAGGCGGCGGCCACGCT < 41bp 1 0.146246964765322 1 0.031078964471817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643088 . . 0 16 hm5C_associated_SNPs_17613 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT GGCGCTGTGCAGCAAGGCCCCTTAGGCGGCGGCCACGCTGT < 41bp 1 0.638562071500961 1 0.100503385066986 experiment 0.722875856998078 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643088 . . 0 14 hm5C_associated_SNPs_17614 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643104 + 109643084 109643124 41 CAGCGAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA CAGCAAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA < 41bp 1 0.681811929011704 1 0.675668120384216 experiment 0.636376141976591 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643104 chr1:109643088 . . 0 5 hm5C_associated_SNPs_17615 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643088 109643088 1 + G A BRCA 109643108 + 109643088 109643128 41 GAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC AAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC < 41bp 1 0.63729690900432 1 0.53125 experiment 0.72540618199136 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643108 chr1:109643088 . . 0 1 hm5C_associated_SNPs_17616 0 0 40 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 145115815 145115815 1 + A C BRCA 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACTTGAACATGCATTCCCCTTATGCCAAACTT < 41bp 1 0.0454418953872752 1 0.0498558878898621 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115815 . . 0 27 hm5C_associated_SNPs_17618 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:145115800-145115821
64251 chr15 44085898 44085898 1 + C G BRCA 44085902 + 44085882 44085922 41 CAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGATCAT CAGTGCCCCATCATCTGTACCCCCAGGGACTCGGAGATCAT < 41bp 1 0.30665305247507 1 0.0751934051513672 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085902 chr15:44085898 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_17620 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:44085886-44085907
64251 chr1 31905840 31905840 1 + T G BRCA 31905832 + 31905812 31905852 41 AGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGAT AGTCTGCGCTCCTCAGACCACCGGCAGGGGAACAGCCTGAT < 41bp 1 0.348322245161596 1 0.581021666526794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31905832 chr1:31905840 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_17621 0 0 2 U2AF1 POSTAR2 ENCODE chr1:31905793-31905863
64251 chr3 9517426 9517426 1 + C G BRCA 9517422 + 9517402 9517442 41 GGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGC GGTATTTTAGCAGCCAGCCACATTGTGGAAACAGCACTGGC < 41bp 1 0.180142605948629 1 0.0923818945884705 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517422 chr3:9517426 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_17623 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:9517388-9517426
64251 chr19 38610164 38610164 1 + C G BRCA 38610159 + 38610139 38610179 41 GCCGAAAACTGTGTCTCCAACACCCCCATCGACTCCACCGG GCCGAAAACTGTGTCTCCAACACCCGCATCGACTCCACCGG < 41bp 1 0.186952557135105 1 0.170436561107635 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38610159 chr19:38610164 nonsynonymous SNV 0.986 2 26 hm5C_associated_SNPs_17625 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:38610133-38610166
64251 chr11 47436635 47436635 1 + C G BRCA 47436655 + 47436635 47436675 41 CCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAAC GCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAAC < 41bp 1 0.759138564533504 1 0.793690085411072 experiment 0.481722870932993 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC39A13 ENSG00000165915 CDS Human protein_coding chr11:47436655 chr11:47436635 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_17627 0 0 1 BUD13 POSTAR2 ENCODE chr11:47436601-47436652
64251 chr11 62656079 62656079 1 + C G BRCA 62656090 + 62656070 62656110 41 CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG CAGCCAGGCGGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG < 41bp 1 0.30297974645544 1 0.190733313560486 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656090 chr11:62656079 nonsynonymous SNV 0.623 2 10 hm5C_associated_SNPs_17628 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr11 62656079 62656079 1 + C G BRCA 62656092 + 62656072 62656112 41 GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC GCCAGGCGGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC < 41bp 1 0.432464704937968 1 0.0640538334846497 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656092 chr11:62656079 nonsynonymous SNV 0.623 2 8 hm5C_associated_SNPs_17629 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr21 35467531 35467531 1 + A G BRCA 35467517 + 35467497 35467537 41 AATGAGAGCTGTACTGGACACAGCAGACATTGCCATAGTGG AATGAGAGCTGTACTGGACACAGCAGACATTGCCGTAGTGG < 41bp 1 0.747136406049457 1 0.430035829544067 experiment 0.505727187901087 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC5A3 ENSG00000198743;ENSG00000272962 CDS Human other chr21:35467517 chr21:35467531 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_17630 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:35467486-35467533
64251 chrX 135126695 135126695 1 + A T BRCA 135126705 + 135126685 135126725 41 TTCTACTGTGAACACTGAACCGGCCACATCCAGCGCCCCAA TTCTACTGTGTACACTGAACCGGCCACATCCAGCGCCCCAA < 41bp 1 0.449010486109524 1 0.699419021606445 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135126705 chrX:135126695 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_17631 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:135126670-135126697
64251 chrX 135126700 135126700 1 + T A BRCA 135126705 + 135126685 135126725 41 TTCTACTGTGAACACTGAACCGGCCACATCCAGCGCCCCAA TTCTACTGTGAACACAGAACCGGCCACATCCAGCGCCCCAA < 41bp 1 0.454159442634623 1 0.559373676776886 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135126705 chrX:135126700 synonymous SNV . 0 16 hm5C_associated_SNPs_17632 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:135126691-135126709
64251 chr4 146467997 146467997 1 + G C BRCA 146468006 + 146467986 146468026 41 TCCAACAATAAGAACCGTTTCTGCCTTGGGCTGCTCTCCAA TCCAACAATAACAACCGTTTCTGCCTTGGGCTGCTCTCCAA < 41bp 1 0.667404029563443 1 0.121126592159271 experiment 0.665191940873113 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146468006 chr4:146467997 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_17633 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:146467968-146467997
64251 chr15 67073661 67073661 1 + G A BRCA 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGCGCCCGGCGGCCGCGCCCTGGTCATGCGCAAGGT < 41bp 1 0.501226407333946 1 0.302992343902588 experiment 0.997547185332109 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073661 nonsynonymous SNV 0.997 5 31 hm5C_associated_SNPs_17634 0 0 2 METAP2 POSTAR2 ENCODE chr15:67073613-67073666
64251 chr9 72913049 72913049 1 + G C BRCA 72913039 + 72913019 72913059 41 GCCCCAGATTGATGCCATTACAAATGATCTGAGACGGATTC GCCCCAGATTGATGCCATTACAAATGATCTCAGACGGATTC < 41bp 1 0.504104660245402 1 0.185905575752258 experiment 0.991790679509197 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC5 ENSG00000198887 CDS Human protein_coding chr9:72913039 chr9:72913049 synonymous SNV . 0 31 hm5C_associated_SNPs_17635 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:72913039-72913074
64251 chr17 18167940 18167940 1 + C T BRCA 18167953 + 18167933 18167973 41 TGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TGCTCATTGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC < 41bp 1 0.674045840283989 1 0.901454448699951 experiment 0.651908319432021 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167953 chr17:18167940 synonymous SNV . 0 8 hm5C_associated_SNPs_17636 0 0 2 RBM15 POSTAR2 ENCODE chr17:18167917-18167948
64251 chr17 7478063 7478063 1 + G C BRCA 7478057 + 7478037 7478077 41 TGACCTGGGTAGAGTGGCATCTGGTTGGTGATGCCCATCTC TGACCTGGGTAGAGTGGCATCTGGTTCGTGATGCCCATCTC < 41bp 1 0.552720742606641 1 0.520241260528564 experiment 0.894558514786718 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA48 ENSG00000209582 ncRNA_exonic Human snoRNA chr17:7478057 chr17:7478063 . . 0 27 hm5C_associated_SNPs_17637 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7478060-7478089
64251 chr17 7478063 7478063 1 + G C BRCA 7478071 + 7478051 7478091 41 TGGCATCTGGTTGGTGATGCCCATCTCATATCAGCCAGGGA TGGCATCTGGTTCGTGATGCCCATCTCATATCAGCCAGGGA < 41bp 1 0.0187520180800969 1 0.182006597518921 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA48 ENSG00000209582 ncRNA_exonic Human snoRNA chr17:7478071 chr17:7478063 . . 0 13 hm5C_associated_SNPs_17638 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7478060-7478089
64251 chr17 7478063 7478063 1 + G C BRCA 7478077 + 7478057 7478097 41 CTGGTTGGTGATGCCCATCTCATATCAGCCAGGGACAAAGC CTGGTTCGTGATGCCCATCTCATATCAGCCAGGGACAAAGC < 41bp 1 0.0750032814161344 1 0.100854933261871 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA48 ENSG00000209582 ncRNA_exonic Human snoRNA chr17:7478077 chr17:7478063 . . 0 7 hm5C_associated_SNPs_17639 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7478060-7478089
64251 chr17 7481290 7481290 1 + C G BRCA 7481276 + 7481256 7481296 41 CAAAGGCAGAAGGGAGGATCCAAGGTGATTCCCTCTCCAAG CAAAGGCAGAAGGGAGGATCCAAGGTGATTCCCTGTCCAAG < 41bp 1 0.573573070281181 1 0.705435156822205 experiment 0.852853859437638 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA67 ENSG00000264772 ncRNA_exonic Human processed_transcript chr17:7481276 chr17:7481290 . . 0 35 hm5C_associated_SNPs_17640 0 0 24 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:7481260-7481300
64251 chr17 7481290 7481290 1 + C G BRCA 7481292 + 7481272 7481312 41 GATCCAAGGTGATTCCCTCTCCAAGGGGACATCAGTGCCTC GATCCAAGGTGATTCCCTGTCCAAGGGGACATCAGTGCCTC < 41bp 1 0.341822113440278 1 0.894575178623199 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA67 ENSG00000264772 ncRNA_exonic Human processed_transcript chr17:7481292 chr17:7481290 . . 0 19 hm5C_associated_SNPs_17641 0 0 24 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:7481260-7481300
64251 chr17 7481290 7481290 1 + C G BRCA 7481301 + 7481281 7481321 41 TGATTCCCTCTCCAAGGGGACATCAGTGCCTCTCAGGAAAG TGATTCCCTGTCCAAGGGGACATCAGTGCCTCTCAGGAAAG < 41bp 1 0.142000859792758 1 0.138337463140488 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA67 ENSG00000264772 ncRNA_exonic Human processed_transcript chr17:7481301 chr17:7481290 . . 0 10 hm5C_associated_SNPs_17642 0 0 24 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:7481260-7481300
64251 chr19 49993282 49993282 1 + C T BRCA 49993267 + 49993247 49993287 41 CATCTTTCGTTTGAGTCTCACGGCCATGAGATCAACCCCAT CATCTTTCGTTTGAGTCTCACGGCCATGAGATCAATCCCAT < 41bp 1 0.361611070483946 1 0.774172902107239 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993267 chr19:49993282 . . 0 36 hm5C_associated_SNPs_17643 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993279 + 49993259 49993299 41 GAGTCTCACGGCCATGAGATCAACCCCATGCACCGCTCTGA GAGTCTCACGGCCATGAGATCAATCCCATGCACCGCTCTGA < 41bp 1 0.102959100373483 1 0.122592985630035 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993279 chr19:49993282 . . 0 24 hm5C_associated_SNPs_17644 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993283 + 49993263 49993303 41 CTCACGGCCATGAGATCAACCCCATGCACCGCTCTGAGACC CTCACGGCCATGAGATCAATCCCATGCACCGCTCTGAGACC < 41bp 1 0.159335709782927 1 0.0551220178604126 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993283 chr19:49993282 . . 0 20 hm5C_associated_SNPs_17645 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993284 + 49993264 49993304 41 TCACGGCCATGAGATCAACCCCATGCACCGCTCTGAGACCT TCACGGCCATGAGATCAATCCCATGCACCGCTCTGAGACCT < 41bp 1 0.139977836552453 1 0.177679687738419 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993284 chr19:49993282 . . 0 19 hm5C_associated_SNPs_17646 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993285 + 49993265 49993305 41 CACGGCCATGAGATCAACCCCATGCACCGCTCTGAGACCTG CACGGCCATGAGATCAATCCCATGCACCGCTCTGAGACCTG < 41bp 1 0.190225572086639 1 0.0888984799385071 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993285 chr19:49993282 . . 0 18 hm5C_associated_SNPs_17647 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993289 + 49993269 49993309 41 GCCATGAGATCAACCCCATGCACCGCTCTGAGACCTGCCAG GCCATGAGATCAATCCCATGCACCGCTCTGAGACCTGCCAG < 41bp 1 0.62936565997159 1 0.129333168268204 experiment 0.74126868005682 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993289 chr19:49993282 . . 0 14 hm5C_associated_SNPs_17648 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993291 + 49993271 49993311 41 CATGAGATCAACCCCATGCACCGCTCTGAGACCTGCCAGCC CATGAGATCAATCCCATGCACCGCTCTGAGACCTGCCAGCC < 41bp 1 0.260852416927357 1 0.0498338341712952 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993291 chr19:49993282 . . 0 12 hm5C_associated_SNPs_17649 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993292 + 49993272 49993312 41 ATGAGATCAACCCCATGCACCGCTCTGAGACCTGCCAGCCA ATGAGATCAATCCCATGCACCGCTCTGAGACCTGCCAGCCA < 41bp 1 0.160354350520205 1 0.0719022154808044 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993292 chr19:49993282 . . 0 11 hm5C_associated_SNPs_17650 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993294 + 49993274 49993314 41 GAGATCAACCCCATGCACCGCTCTGAGACCTGCCAGCCACT GAGATCAATCCCATGCACCGCTCTGAGACCTGCCAGCCACT < 41bp 1 0.173534863325891 1 0.323293566703796 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993294 chr19:49993282 . . 0 9 hm5C_associated_SNPs_17651 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr19 49993282 49993282 1 + C T BRCA 49993296 + 49993276 49993316 41 GATCAACCCCATGCACCGCTCTGAGACCTGCCAGCCACTCT GATCAATCCCATGCACCGCTCTGAGACCTGCCAGCCACTCT < 41bp 1 0.491785850646695 1 0.468797147274017 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD32A ENSG00000201675 ncRNA_exonic Human snoRNA chr19:49993296 chr19:49993282 . . 0 7 hm5C_associated_SNPs_17652 0 0 86 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49993259-49993288
64251 chr17 27047625 27047625 1 + A G BRCA 27047615 + 27047595 27047635 41 CCTGACACTTGTGATGTCTTCAAAGGAACCACTGATGCACC CCTGACACTTGTGATGTCTTCAAAGGAACCGCTGATGCACC < 41bp 1 0.609927011866498 1 0.876006364822388 experiment 0.780145976267005 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD42B ENSG00000238423 ncRNA_exonic Human snoRNA chr17:27047615 chr17:27047625 . . 0 31 hm5C_associated_SNPs_17653 0 0 67 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:27047568-27047629
64251 chr17 27047625 27047625 1 + A G BRCA 27047623 + 27047603 27047643 41 TTGTGATGTCTTCAAAGGAACCACTGATGCACCTGTGGCCA TTGTGATGTCTTCAAAGGAACCGCTGATGCACCTGTGGCCA < 41bp 1 0.286897865927137 1 0.08964803814888 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD42B ENSG00000238423 ncRNA_exonic Human snoRNA chr17:27047623 chr17:27047625 . . 0 23 hm5C_associated_SNPs_17654 0 0 67 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:27047568-27047629
64251 chr17 27047625 27047625 1 + A G BRCA 27047632 + 27047612 27047652 41 CTTCAAAGGAACCACTGATGCACCTGTGGCCAGGGTGGCCC CTTCAAAGGAACCGCTGATGCACCTGTGGCCAGGGTGGCCC < 41bp 1 0.783814979279968 1 0.0290888547897339 experiment 0.432370041440064 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD42B ENSG00000238423 ncRNA_exonic Human snoRNA chr17:27047632 chr17:27047625 . . 0 14 hm5C_associated_SNPs_17655 0 0 67 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:27047568-27047629
64251 chr17 27047625 27047625 1 + A G BRCA 27047634 + 27047614 27047654 41 TCAAAGGAACCACTGATGCACCTGTGGCCAGGGTGGCCCAC TCAAAGGAACCGCTGATGCACCTGTGGCCAGGGTGGCCCAC < 41bp 1 0.317479069287887 1 0.0275797843933105 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD42B ENSG00000238423 ncRNA_exonic Human snoRNA chr17:27047634 chr17:27047625 . . 0 12 hm5C_associated_SNPs_17656 0 0 67 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:27047568-27047629
64251 chr17 27049656 27049656 1 + C T BRCA 27049668 + 27049648 27049688 41 TGGTACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCT TGGTACCTTGTTGTCTGATGCACCTAGGCTCTCCTGGCTCT < 41bp 1 0.295541211337443 1 0.14081221818924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD4A ENSG00000238578;ENSG00000264577 ncRNA_exonic Human other chr17:27049668 chr17:27049656 . . 0 9 hm5C_associated_SNPs_17657 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27049589-27049680
64251 chr17 27049656 27049656 1 + C T BRCA 27049670 + 27049650 27049690 41 GTACCTCGTTGTCTGATGCACCTAGGCTCTCCTGGCTCTGG GTACCTTGTTGTCTGATGCACCTAGGCTCTCCTGGCTCTGG < 41bp 1 0.0666111203314629 1 0.0962009429931641 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD4A ENSG00000238578;ENSG00000264577 ncRNA_exonic Human other chr17:27049670 chr17:27049656 . . 0 7 hm5C_associated_SNPs_17658 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27049589-27049680
64251 chr17 46189979 46189979 1 + A G BRCA 46189985 + 46189965 46190005 41 CCGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT CCGAGTGCAGAATGGGGGCTCCTGGAACTCTTATGTGGATT < 41bp 1 0.143606718279256 1 0.217233508825302 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX11 ENSG00000002919 CDS Human protein_coding chr17:46189985 chr17:46189979 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_17659 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:46189967-46189989
64251 chr11 64803030 64803030 1 + G C BRCA 64803026 + 64803006 64803046 41 TCCAGCCCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTG TCCAGCCCTGCCCAGGAGGCCCTGCATCTCCTCTTTAACTG < 41bp 1 0.0989631568225501 1 0.0672701001167297 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64803026 chr11:64803030 nonsynonymous SNV 0.833 3 25 hm5C_associated_SNPs_17660 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:64803000-64803038
64251 chr1 16255132 16255132 1 + G C BRCA 16255122 + 16255102 16255142 41 AAAGACAGATAAAGAACGAACTTTTGATCCGGAGAGAGTGG AAAGACAGATAAAGAACGAACTTTTGATCCCGAGAGAGTGG < 41bp 1 0.0266761006590659 1 0.0962590575218201 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255122 chr1:16255132 synonymous SNV . 0 31 hm5C_associated_SNPs_17662 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr1 16255132 16255132 1 + G C BRCA 16255130 + 16255110 16255150 41 ATAAAGAACGAACTTTTGATCCGGAGAGAGTGGAGAGAGAG ATAAAGAACGAACTTTTGATCCCGAGAGAGTGGAGAGAGAG < 41bp 1 0.420653536877918 1 0.23229643702507 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255130 chr1:16255132 synonymous SNV . 0 23 hm5C_associated_SNPs_17663 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr1 16262320 16262320 1 + G A BRCA 16262304 + 16262284 16262324 41 GTACCGACTGCACCCCTATACTGTGCCACGGGATGTGAGGA GTACCGACTGCACCCCTATACTGTGCCACGGGATGTAAGGA < 41bp 1 0.161475386657581 1 0.344477444887161 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16262304 chr1:16262320 synonymous SNV . 0 37 hm5C_associated_SNPs_17664 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:16262265-16262339
64251 chr16 30736382 30736382 1 + A C BRCA 30736401 + 30736381 30736421 41 CACCTCGTTCCCCTTTTTATCTGGTAAGTTTTACTTCCTCA CCCCTCGTTCCCCTTTTTATCTGGTAAGTTTTACTTCCTCA < 41bp 1 0.437432195146538 1 0.251325130462646 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30736401 chr16:30736382 synonymous SNV . 0 2 hm5C_associated_SNPs_17665 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:30736343-30736404
64251 chr1 144014068 144014068 1 + T C BRCA 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACACGC < 41bp 1 0.202889132022592 1 0.346023440361023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014068 . . 0 39 hm5C_associated_SNPs_17666 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:144014065-144014084
64251 chr1 144014068 144014068 1 + T C BRCA 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACACGCAG < 41bp 1 0.265070604577234 1 0.5405313372612 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014068 . . 0 37 hm5C_associated_SNPs_17667 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:144014065-144014084
64251 chr1 24996733 24996733 1 + C T BRCA 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACTGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG < 41bp 1 0.56995742725009 1 0.547226428985596 experiment 0.86008514549982 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996733 nonsynonymous SNV 0.971 2 3 hm5C_associated_SNPs_17668 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr7 100485916 100485916 1 + C T BRCA 100485923 + 100485903 100485943 41 CACAGGAGGCCCTCCATACCCCCATGCCCCGTATGGTGCTG CACAGGAGGCCCTTCATACCCCCATGCCCCGTATGGTGCTG < 41bp 1 0.401818975097635 1 0.319004565477371 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485923 chr7:100485916 nonsynonymous SNV 0.961 1 14 hm5C_associated_SNPs_17669 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221668 chr7:100485900-100485920
64251 chr14 64445702 64445702 1 + A C BRCA 64445696 + 64445676 64445716 41 TGGAACATTAAATATGGGAGCAGAGAATCTGTGGAATTATT TGGAACATTAAATATGGGAGCAGAGACTCTGTGGAATTATT < 41bp 1 0.0777892723834397 1 0.382619023323059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64445696 chr14:64445702 nonsynonymous SNV 0.982 0 27 hm5C_associated_SNPs_17673 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:64445696-64445730
64251 chr7 27833979 27833979 1 + A T BRCA 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAATGTCTTCACAAAGAAAACGGGGATTCAGCAGAAAGTGA < 41bp 1 0.736962639612207 1 0.716164946556091 experiment 0.526074720775587 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833979 nonsynonymous SNV 0.963 1 27 hm5C_associated_SNPs_17675 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833950-27833986
64251 chr4 26622298 26622298 1 + G A BRCA 26622308 + 26622288 26622328 41 TGGTATACATGAGGAAAGCACAGGTTGGCTATTGTTCAATT TGGTATACATAAGGAAAGCACAGGTTGGCTATTGTTCAATT < 41bp 1 0.443091572817978 1 0.349998891353607 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26622308 chr4:26622298 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_17676 0 0 1 DDX24 POSTAR2 ENCODE chr4:26622234-26622311
64251 chr6 37280745 37280745 1 + G A BRCA 37280749 + 37280729 37280769 41 TCTCAAGACATGCTGCGAAGCATTGAGGCTGACAGCTTTTG TCTCAAGACATGCTGCAAAGCATTGAGGCTGACAGCTTTTG < 41bp 1 0.18759011474429 1 0.0741725862026215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37280749 chr6:37280745 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_17677 0 0 2 BUD13 POSTAR2 ENCODE chr6:37280660-37280788
64251 chr12 64878170 64878170 1 + C G BRCA 64878177 + 64878157 64878197 41 GGCGACGCTTAGTCTTAGAACCTGGAAGGCTGGCACAACAT GGCGACGCTTAGTGTTAGAACCTGGAAGGCTGGCACAACAT < 41bp 1 0.393279782762969 1 0.466838121414185 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBK1 ENSG00000183735 CDS Human protein_coding chr12:64878177 chr12:64878170 synonymous SNV . 0 14 hm5C_associated_SNPs_17678 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:64878142-64878202
64251 chr15 57554331 57554331 1 + A C BRCA 57554318 + 57554298 57554338 41 ACTCATCGGGAAGACTCTGTCAGTCTCAATGGCAATCATTC ACTCATCGGGAAGACTCTGTCAGTCTCAATGGCCATCATTC < 41bp 1 0.25543291538326 1 0.374713838100433 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554318 chr15:57554331 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_17679 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554331 57554331 1 + A C BRCA 57554338 + 57554318 57554358 41 CAGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCA CAGTCTCAATGGCCATCATTCAGTCCTGTCTAGTACAGTCA < 41bp 1 0.163693058635508 1 0.306455194950104 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554338 chr15:57554331 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_17680 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554331 57554331 1 + A C BRCA 57554343 + 57554323 57554363 41 TCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCACTACT TCAATGGCCATCATTCAGTCCTGTCTAGTACAGTCACTACT < 41bp 1 0.109144589215324 1 0.0318277478218079 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554343 chr15:57554331 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_17681 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr12 124074976 124074976 1 + G A BRCA 124074965 + 124074945 124074985 41 GTAAAGCACGAACAGGAATACATGGAAGTCCGGGAGAGAAT GTAAAGCACGAACAGGAATACATGGAAGTCCAGGAGAGAAT < 41bp 1 0.61481941653655 1 0.286285936832428 experiment 0.770361166926899 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED2 ENSG00000086598 CDS Human protein_coding chr12:124074965 chr12:124074976 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_17684 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124074899-124074984
64251 chr7 12269421 12269421 1 + T G BRCA 12269401 + 12269381 12269421 41 AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATT AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATG < 41bp 1 0.231780576608742 1 0.0449942052364349 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12269401 chr7:12269421 nonsynonymous SNV 0.974 0 41 hm5C_associated_SNPs_17685 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:12269405-12269441
64251 chr6 44274744 44274744 1 - A G BRCA 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CGCCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC < 41bp 1 0.467392721656051 1 0.81921660900116 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274744 nonsynonymous SNV 0.985 1 3 hm5C_associated_SNPs_17686 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:44274732-44274744
64251 chr12 98926744 98926744 1 + G A BRCA 98926754 + 98926734 98926774 41 GGGCAGTACCGAACTACAGGCAGCTAAGAAAGTACATACTT GGGCAGTACCAAACTACAGGCAGCTAAGAAAGTACATACTT < 41bp 1 0.429381108388864 1 0.184283792972565 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98926754 chr12:98926744 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_17687 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr12:98926657-98926752
64251 chr5 72187661 72187661 1 + C T BRCA 72187646 + 72187626 72187666 41 ATTGTAAATAGGAATATATTCAGATGCTAATGCCTCCACTG ATTGTAAATAGGAATATATTCAGATGCTAATGCCTTCACTG < 41bp 1 0.535886665608629 1 0.831857264041901 experiment 0.928226668782743 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187646 chr5:72187661 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_17688 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187652 + 72187632 72187672 41 AATAGGAATATATTCAGATGCTAATGCCTCCACTGATCCAG AATAGGAATATATTCAGATGCTAATGCCTTCACTGATCCAG < 41bp 1 0.198897584690302 1 0.0844723284244537 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187652 chr5:72187661 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_17689 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187658 + 72187638 72187678 41 AATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGG AATATATTCAGATGCTAATGCCTTCACTGATCCAGAAATGG < 41bp 1 0.00652781788151669 1 0.0898264944553375 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187658 chr5:72187661 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_17690 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187659 + 72187639 72187679 41 ATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGA ATATATTCAGATGCTAATGCCTTCACTGATCCAGAAATGGA < 41bp 1 0.170706313920258 1 0.323081076145172 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187659 chr5:72187661 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_17691 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187662 + 72187642 72187682 41 TATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACA TATTCAGATGCTAATGCCTTCACTGATCCAGAAATGGAACA < 41bp 1 0.18623096505163 1 0.158769845962524 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187662 chr5:72187661 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_17692 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187664 + 72187644 72187684 41 TTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACATG TTCAGATGCTAATGCCTTCACTGATCCAGAAATGGAACATG < 41bp 1 0.299199347766053 1 0.1149962246418 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187664 chr5:72187661 nonsynonymous SNV 0.999 2 18 hm5C_associated_SNPs_17693 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187669 + 72187649 72187689 41 ATGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAA ATGCTAATGCCTTCACTGATCCAGAAATGGAACATGTTAAA < 41bp 1 0.484940792448874 1 0.797165870666504 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187669 chr5:72187661 nonsynonymous SNV 0.999 2 13 hm5C_associated_SNPs_17694 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187670 + 72187650 72187690 41 TGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAAG TGCTAATGCCTTCACTGATCCAGAAATGGAACATGTTAAAG < 41bp 1 0.552527214994347 1 0.344975888729095 experiment 0.894945570011305 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187670 chr5:72187661 nonsynonymous SNV 0.999 2 12 hm5C_associated_SNPs_17695 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr5 72187661 72187661 1 + C T BRCA 72187681 + 72187661 72187701 41 CCACTGATCCAGAAATGGAACATGTTAAAGGATGAAGATAA TCACTGATCCAGAAATGGAACATGTTAAAGGATGAAGATAA < 41bp 1 0.190759733972646 1 0.165381729602814 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187681 chr5:72187661 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_17696 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72187653-72187704
64251 chr14 21963403 21963403 1 + C T BRCA 21963397 + 21963377 21963417 41 TCTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAA TCTTCTCACAGGTTGAGTCTCCTTCTTAGATGGATGTTGAA < 41bp 1 0.0291654046251917 1 0.0503973066806793 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963397 chr14:21963403 stopgain 1.000 0 27 hm5C_associated_SNPs_17698 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr14 21963403 21963403 1 + C T BRCA 21963398 + 21963378 21963418 41 CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAT CTTCTCACAGGTTGAGTCTCCTTCTTAGATGGATGTTGAAT < 41bp 1 0.124210416324829 1 0.0162611305713654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963398 chr14:21963403 stopgain 1.000 0 26 hm5C_associated_SNPs_17699 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr12 6976710 6976710 1 + C T BRCA 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACACTGACCTTTAGCGCCTCGGCT < 41bp 1 0.499995076636286 1 0.110215365886688 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976710 stopgain 0.751 0 29 hm5C_associated_SNPs_17700 0 0 2 DDX3X POSTAR2 ENCODE chr12:6976699-6976744
64251 chr5 14498736 14498736 1 + C A BRCA 14498746 + 14498726 14498766 41 CGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG CGTCGGCCAGACTGAGGGTCCTAGGTAAGCACCGTGCAACG < 41bp 1 0.412255612835644 1 0.242122203111649 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14498746 chr5:14498736 nonsynonymous SNV 0.936 3 11 hm5C_associated_SNPs_17702 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14498717-14498739
64251 chr7 98528431 98528431 1 + T A BRCA 98528424 + 98528404 98528444 41 AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTA AGACATTCCTGAAAGCACTTCTCTTTGACATGATGGACTTA < 41bp 1 0.0472045729483243 1 0.20312237739563 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528424 chr7:98528431 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_17703 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr7 98528431 98528431 1 + T A BRCA 98528441 + 98528421 98528461 41 CTTCTCTTTGTCATGATGGACTTAACTGGAGAGGTAGGTGA CTTCTCTTTGACATGATGGACTTAACTGGAGAGGTAGGTGA < 41bp 1 0.105074679925999 1 0.0781107544898987 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528441 chr7:98528431 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_17704 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr3 12531408 12531408 1 + T C BRCA 12531390 + 12531370 12531410 41 CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTC CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAACTC < 41bp 1 0.35506274392437 1 0.272526681423187 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12531390 chr3:12531408 nonsynonymous SNV 0.012 1 39 hm5C_associated_SNPs_17705 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12531391-12531477
64251 chr2 113277954 113277954 1 + A G BRCA 113277937 + 113277917 113277957 41 TTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGCT TTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGGGCT < 41bp 1 0.797626738162286 1 0.842231452465057 experiment 0.404746523675428 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113277937 chr2:113277954 nonsynonymous SNV 0.998 0 38 hm5C_associated_SNPs_17706 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113277930-113277960
64251 chr9 33917121 33917121 1 + C G BRCA 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAAGAGCTCAGATTTGCTTTACGACGACT < 41bp 1 0.281223237586528 1 0.213797748088837 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917121 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_17707 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr9:33917085-33917123
64251 chr7 157041140 157041140 1 + G A BRCA 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA ATGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA < 41bp 1 0.326404341018224 1 0.452379286289215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041140 nonsynonymous SNV 0.749 4 1 hm5C_associated_SNPs_17708 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:157041096-157041145
64251 chr1 10231364 10231364 1 + G A BRCA 10231351 + 10231331 10231371 41 GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGC GATATTTACTTACAGCTGGACTGTGCTCGGTTCACGAAAGC < 41bp 1 0.202238087062774 1 0.171253085136414 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10231351 chr1:10231364 nonsynonymous SNV 0.963 4 34 hm5C_associated_SNPs_17709 0 0 4 FXR2 POSTAR2 ENCODE chr1:10231334-10231386
64251 chr1 229783409 229783409 1 + C G BRCA 229783428 + 229783408 229783448 41 TCCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTC TGCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTC < 41bp 1 0.272107591595119 1 0.319845080375671 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control URB2 ENSG00000135763 CDS Human protein_coding chr1:229783428 chr1:229783409 synonymous SNV . 0 2 hm5C_associated_SNPs_17710 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229783383-229783431
64251 chr3 179478911 179478911 1 + G C BRCA 179478903 + 179478883 179478923 41 CCTGTTGTGCTCTGTAGCATCAGACATCGATGAGTCATCAG CCTGTTGTGCTCTGTAGCATCAGACATCCATGAGTCATCAG < 41bp 1 0.313181971732647 1 0.644624948501587 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179478903 chr3:179478911 nonsynonymous SNV 0.990 4 29 hm5C_associated_SNPs_17711 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr3:179478898-179478919
64251 chr12 6961446 6961446 1 + G A BRCA 6961445 + 6961425 6961465 41 GACGAGTGCGCCTTCTCCTTCGACACGCCGGTAAGCCCATT GACGAGTGCGCCTTCTCCTTCAACACGCCGGTAAGCCCATT < 41bp 1 0.604140043960961 1 0.444234579801559 experiment 0.791719912078078 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6961445 chr12:6961446 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_17712 0 0 1 DDX3X POSTAR2 ENCODE chr12:6961311-6961456
64251 chrX 41025387 41025387 1 + C T BRCA 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGCGATTCTTCAAAGCTGTGAATTGTTGAGAAGGAA < 41bp 1 0.160109057006134 1 0.0666742324829102 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025387 stopgain 1.000 1 32 hm5C_associated_SNPs_17713 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chrX 41025364 41025364 1 + G A BRCA 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGCAATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA < 41bp 1 0.112622916140438 1 0.0452180802822113 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025364 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_17714 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chr3 184577834 184577834 1 + A G BRCA 184577844 + 184577824 184577864 41 CACCTATACTATGACCTCATCAACTTTACCGTGAGTATTAT CACCTATACTGTGACCTCATCAACTTTACCGTGAGTATTAT < 41bp 1 0.118540302766031 1 0.342830181121826 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184577844 chr3:184577834 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_17716 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184577827-184577841
64251 chr4 1941401 1941401 1 + G A BRCA 1941384 + 1941364 1941404 41 CCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATGCAT CCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATACAT < 41bp 1 0.249228622617241 1 0.309852719306946 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1941384 chr4:1941401 nonsynonymous SNV 0.992 4 38 hm5C_associated_SNPs_17717 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:1941375-1941525
64251 chr17 7606072 7606072 1 + C A BRCA 7606087 + 7606067 7606107 41 GAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGTTACCCACT GAGCTACTGTGCTGGGATCTCCGGCAGTCTGGTTACCCACT < 41bp 1 0.485516440378356 1 0.845692038536072 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606087 chr17:7606072 synonymous SNV . 0 6 hm5C_associated_SNPs_17718 0 0 1 SF3B4 POSTAR2 ENCODE chr17:7606016-7606073
64251 chrX 73045755 73045755 1 - C A BRCA 73045745 - 73045725 73045765 41 GAGAACCTGGGACTGTTGAGCATGTTTAATACTTTCCTTGA GAGAACCTGGTACTGTTGAGCATGTTTAATACTTTCCTTGA < 41bp 1 0.127985201859397 1 0.546557247638702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045745 chrX:73045755 . . 0 11 hm5C_associated_SNPs_17720 0 0 98 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045755 73045755 1 - C A BRCA 73045753 - 73045733 73045773 41 AAAGATGAGAGAACCTGGGACTGTTGAGCATGTTTAATACT AAAGATGAGAGAACCTGGTACTGTTGAGCATGTTTAATACT < 41bp 1 0.0463246124984845 1 0.0784916579723358 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045753 chrX:73045755 . . 0 19 hm5C_associated_SNPs_17721 0 0 98 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045755 73045755 1 - C A BRCA 73045760 - 73045740 73045780 41 TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTT TAGGCTTAAAGATGAGAGAACCTGGTACTGTTGAGCATGTT < 41bp 1 0.0454184265074613 1 0.115916579961777 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045760 chrX:73045755 . . 0 26 hm5C_associated_SNPs_17722 0 0 98 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr22 42018039 42018039 1 + G C BRCA 42018044 + 42018024 42018064 41 TCATATTACAAAACCGAGGGCGATGAAGAAGCAGAGGAAGA TCATATTACAAAACCCAGGGCGATGAAGAAGCAGAGGAAGA < 41bp 1 0.113535298778469 1 0.382210254669189 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42018044 chr22:42018039 nonsynonymous SNV 0.982 1 16 hm5C_associated_SNPs_17723 0 0 68 DDX3X POSTAR2 GSE70804,GSM1819215 chr22:42017980-42018060
64251 chrX 67741223 67741223 1 + A G BRCA 67741231 + 67741211 67741251 41 CAGAATGCTGCAAAGAGACTCTGCAGATAGTGAAAAAGATG CAGAATGCTGCAGAGAGACTCTGCAGATAGTGAAAAAGATG < 41bp 1 0.761212444876626 1 0.521591186523438 experiment 0.477575110246748 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YIPF6 ENSG00000181704 CDS Human protein_coding chrX:67741231 chrX:67741223 synonymous SNV . 0 13 hm5C_associated_SNPs_17724 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:67741213-67741240
64251 chr14 75247126 75247126 1 + G C BRCA 75247109 + 75247089 75247129 41 TGTCCTCTTTTATCTTTAGTCTGAGGACCCAGAAGAAGATG TGTCCTCTTTTATCTTTAGTCTGAGGACCCAGAAGAACATG < 41bp 1 0.494642830983916 1 0.755407094955444 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75247109 chr14:75247126 nonsynonymous SNV 0.996 1 38 hm5C_associated_SNPs_17725 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:75247099-75247134
64251 chr6 31868782 31868782 1 - C A BRCA 31868773 - 31868753 31868793 41 TTAGGGACATCGTCAACTACCTTACAGCCGCCTCCTACCTG TTAGGGACATCTTCAACTACCTTACAGCCGCCTCCTACCTG < 41bp 1 0.0645489889825139 1 0.0138328969478607 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB12 ENSG00000204366 CDS Human protein_coding chr6:31868773 chr6:31868782 nonsynonymous SNV 0.983 3 12 hm5C_associated_SNPs_17726 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31868753-31868787
64251 chr6 31868782 31868782 1 - C A BRCA 31868777 - 31868757 31868797 41 GCTGTTAGGGACATCGTCAACTACCTTACAGCCGCCTCCTA GCTGTTAGGGACATCTTCAACTACCTTACAGCCGCCTCCTA < 41bp 1 0.367645519601278 1 0.115822970867157 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB12 ENSG00000204366 CDS Human protein_coding chr6:31868777 chr6:31868782 nonsynonymous SNV 0.983 3 16 hm5C_associated_SNPs_17727 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31868753-31868787
64251 chr1 22835081 22835081 1 + C G BRCA 22835072 + 22835052 22835092 41 TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG TGGTTCAGGTGGTTTCAATTCTCTGATATGAGCAGTTCTAG < 41bp 1 0.416906677923151 1 0.621993958950043 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835072 chr1:22835081 stopgain 0.994 0 30 hm5C_associated_SNPs_17728 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:22835041-22835088
64251 chr1 203787708 203787708 1 + G A BRCA 203787706 + 203787686 203787726 41 ATTTGTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGA ATTTGTTTACAGGGTGACAGCTACCCATTCCGTCACTGTGA < 41bp 1 0.307143535259444 1 0.0972275137901306 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787706 chr1:203787708 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_17729 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787708 203787708 1 + G A BRCA 203787710 + 203787690 203787730 41 GTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCT GTTTACAGGGTGACAGCTACCCATTCCGTCACTGTGAAGCT < 41bp 1 0.101096318275676 1 0.084302693605423 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787710 chr1:203787708 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_17730 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787708 203787708 1 + G A BRCA 203787711 + 203787691 203787731 41 TTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCTG TTTACAGGGTGACAGCTACCCATTCCGTCACTGTGAAGCTG < 41bp 1 0.0767528496962777 1 0.0535237193107605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787711 chr1:203787708 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_17731 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chrX 117959237 117959237 1 + C G BRCA 117959256 + 117959236 117959276 41 ACAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCAT AGAGCCGGCGGCTGAATGCACCCTTGCCGCCTTGGGCCCAT < 41bp 1 0.346376713945864 1 0.0305153429508209 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117959256 chrX:117959237 nonsynonymous SNV 0.157 1 2 hm5C_associated_SNPs_17733 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:117959236-117959237
64251 chr18 74631946 74631946 1 + C T BRCA 74631929 + 74631909 74631949 41 TCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAG TCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGATGAG < 41bp 1 0.737946603130231 1 0.892688035964966 experiment 0.524106793739539 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631929 chr18:74631946 synonymous SNV . 0 38 hm5C_associated_SNPs_17735 0 0 1 GRWD1 POSTAR2 ENCODE chr18:74631792-74631951
64251 chr18 74631946 74631946 1 + C T BRCA 74631960 + 74631940 74631980 41 GCAGGACGAGCCCAAGCACGCCAACTGCTGCACATACTGCC GCAGGATGAGCCCAAGCACGCCAACTGCTGCACATACTGCC < 41bp 1 0.0925980680327459 1 0.319972723722458 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631960 chr18:74631946 synonymous SNV . 0 7 hm5C_associated_SNPs_17736 0 0 1 GRWD1 POSTAR2 ENCODE chr18:74631792-74631951
64251 chr19 7584348 7584348 1 + G A BRCA 7584367 + 7584347 7584387 41 CGACGCCGAAGCTCCGGGCTCGGAACCCCAAGATCCCGACC CAACGCCGAAGCTCCGGGCTCGGAACCCCAAGATCCCGACC < 41bp 1 0.663668563938403 1 0.596680045127869 experiment 0.672662872123193 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584367 chr19:7584348 nonsynonymous SNV 0.003 0 2 hm5C_associated_SNPs_17737 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584315-7584348
64251 chr9 109773238 109773238 1 + A G BRCA 109773231 + 109773211 109773251 41 CCATTGGGATAGACTTTTCCCTAAAGAATGAAACAGTAGCC CCATTGGGATAGACTTTTCCCTAAAGAGTGAAACAGTAGCC < 41bp 1 0.453378653480422 1 0.386569380760193 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109773231 chr9:109773238 nonsynonymous SNV 0.972 0 28 hm5C_associated_SNPs_17738 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:109773232-109773259
64251 chr8 144732952 144732952 1 + T C BRCA 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCATCGCCCAGACCTTATTGAACACCA < 41bp 1 0.299458882130848 1 0.27214178442955 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732952 nonsynonymous SNV 0.008 2 22 hm5C_associated_SNPs_17740 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:144732906-144732960
64251 chr1 151261988 151261988 1 + A G BRCA 151262002 + 151261982 151262022 41 TTGCCCAAAAAAGGACCATGCTGGAACATCTCAAGGTACAG TTGCCCGAAAAAGGACCATGCTGGAACATCTCAAGGTACAG < 41bp 1 0.664557652015613 1 0.379396080970764 experiment 0.670884695968773 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151262002 chr1:151261988 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_17741 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr1:151261967-151261988
64251 chrX 47774342 47774342 1 + G C BRCA 47774348 + 47774328 47774368 41 AAATTTGGAATTAAGCCTTCCCAGAGGAGAATTTCTGGGAA AAATTTGGAATTAACCCTTCCCAGAGGAGAATTTCTGGGAA < 41bp 1 0.247264451606426 1 0.681777596473694 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47774348 chrX:47774342 nonsynonymous SNV 0.908 0 15 hm5C_associated_SNPs_17742 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:47774329-47774353
64251 chr3 50006066 50006066 1 + G T CESC 50006076 + 50006056 50006096 41 GATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCT GATTACAGAATCATGGAGTACCGTGATGTGGATCATAGGCT < 41bp 1 0.149124613276973 1 0.0963891744613647 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50006076 chr3:50006066 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_17743 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:50006060-50006080
64251 chr1 230379165 230379165 1 + G T CESC 230379152 + 230379132 230379172 41 AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGTTGGCGGA < 41bp 1 0.0827361813750168 1 0.112753301858902 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230379152 chr1:230379165 nonsynonymous SNV 0.909 3 34 hm5C_associated_SNPs_17744 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:230379147-230379171
64251 chr1 223900477 223900477 1 + C T CESC 223900495 + 223900475 223900515 41 CTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCT CTTTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCT < 41bp 1 0.595728486549037 1 0.27934068441391 experiment 0.808543026901926 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223900495 chr1:223900477 synonymous SNV . 0 3 hm5C_associated_SNPs_17745 0 0 1 SRSF1 POSTAR2 ENCODE chr1:223900461-223900526
64251 chr6 52943677 52943677 1 + G A CESC 52943668 + 52943648 52943688 41 AGATTACTTATACCCGGTCTCCAGATGGTGATGGCGTTGGA AGATTACTTATACCCGGTCTCCAGATGGTAATGGCGTTGGA < 41bp 1 0.618395572902304 1 0.650678038597107 experiment 0.763208854195393 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52943668 chr6:52943677 nonsynonymous SNV 0.998 2 30 hm5C_associated_SNPs_17747 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:52943602-52943690
64251 chr5 131930625 131930625 1 + G T CESC 131930610 + 131930590 131930630 41 AAAATCATATAAATAATGAACTAAAAAGAAAGGAAGAGCAG AAAATCATATAAATAATGAACTAAAAAGAAAGGAATAGCAG < 41bp 1 0.378402924683178 1 0.331418365240097 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131930610 chr5:131930625 stopgain 0.998 1 36 hm5C_associated_SNPs_17748 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:131930599-131930634
64251 chr5 131930621 131930621 1 + G T CESC 131930610 + 131930590 131930630 41 AAAATCATATAAATAATGAACTAAAAAGAAAGGAAGAGCAG AAAATCATATAAATAATGAACTAAAAAGAAATGAAGAGCAG < 41bp 1 0.423520661176127 1 0.366712749004364 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131930610 chr5:131930621 nonsynonymous SNV 0.991 4 32 hm5C_associated_SNPs_17749 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:131930599-131930634
64251 chr17 33953832 33953832 1 + G C CESC 33953838 + 33953818 33953858 41 CAGTATGTCGCCCTGAGGAACATCAACTTAATTGTCCAGAA CAGTATGTCGCCCTCAGGAACATCAACTTAATTGTCCAGAA < 41bp 1 0.375431246651671 1 0.0836286544799805 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33953838 chr17:33953832 synonymous SNV . 0 15 hm5C_associated_SNPs_17751 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:33953810-33953851
64251 chr12 105558478 105558478 1 + G A CESC 105558486 + 105558466 105558506 41 CAGAGCAGACAAGACTGCGGCTGAAGAAAACCAAGAAAAGA CAGAGCAGACAAAACTGCGGCTGAAGAAAACCAAGAAAAGA < 41bp 1 0.385823387248451 1 0.503418028354645 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105558486 chr12:105558478 synonymous SNV . 0 13 hm5C_associated_SNPs_17752 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221667 chr12:105558460-105558480
64251 chr17 40714701 40714701 1 + C G CESC 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTGGCCTGGCCTCCATCCTGACCTCG < 41bp 1 0.53842918573091 1 0.220811426639557 experiment 0.923141628538179 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714701 nonsynonymous SNV 0.902 4 18 hm5C_associated_SNPs_17753 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:40714693-40714710
64251 chr6 7581095 7581095 1 + C T CESC 7581082 + 7581062 7581102 41 CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCCA CAGGAGAGGACTGTGAAGGACCAGGATATCACGTGGTTCCA < 41bp 1 0.331653775147379 1 0.288315951824188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581082 chr6:7581095 nonsynonymous SNV 0.012 2 34 hm5C_associated_SNPs_17754 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581095 7581095 1 + C T CESC 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATATCACGTGGTTCCAGAACTCTCTGAAAGAGCT < 41bp 1 0.235106709830923 1 0.295678824186325 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581095 nonsynonymous SNV 0.012 2 16 hm5C_associated_SNPs_17755 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581095 7581095 1 + C T CESC 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGTGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG < 41bp 1 0.781889854188104 1 0.688137471675873 experiment 0.436220291623793 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581095 nonsynonymous SNV 0.012 2 6 hm5C_associated_SNPs_17756 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chrX 107909764 107909764 1 + G A CESC 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCAAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA < 41bp 1 0.744776597986412 1 0.769044041633606 experiment 0.510446804027176 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909764 nonsynonymous SNV 0.988 3 3 hm5C_associated_SNPs_17757 0 0 1 BUD13 POSTAR2 ENCODE chrX:107909731-107909764
64251 chr17 46135813 46135813 1 + C T CESC 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACTTCTTATTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT < 41bp 1 0.771394186856806 1 0.709589719772339 experiment 0.457211626286388 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135813 nonsynonymous SNV 0.997 2 10 hm5C_associated_SNPs_17758 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr12 132589423 132589423 1 + G A CESC 132589422 + 132589402 132589442 41 GCCCCTGGGCTTCGAGAGGACGCCCGGCGTGCTGCTCCCCG GCCCCTGGGCTTCGAGAGGACACCCGGCGTGCTGCTCCCCG < 41bp 1 0.476044562091122 1 0.0790144205093384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589422 chr12:132589423 synonymous SNV . 0 22 hm5C_associated_SNPs_17759 0 0 1 RBM15 POSTAR2 ENCODE chr12:132589380-132589450
64251 chr6 44199824 44199824 1 + C T CESC 44199838 + 44199818 44199858 41 CAGCATCGCAGGCAGCAGCACCTGGGGTGAGGATGCCACAG CAGCATTGCAGGCAGCAGCACCTGGGGTGAGGATGCCACAG < 41bp 1 0.312268309731337 1 0.539102137088776 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44199838 chr6:44199824 synonymous SNV . 0 7 hm5C_associated_SNPs_17760 0 0 6 DDX24 POSTAR2 ENCODE chr6:44199822-44199833
64251 chr10 7745454 7745454 1 + C T CESC 7745438 + 7745418 7745458 41 TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTTGAAA < 41bp 1 0.750201155024756 1 0.779416918754578 experiment 0.499597689950488 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7745438 chr10:7745454 synonymous SNV . 0 37 hm5C_associated_SNPs_17761 0 0 2 DDX3X POSTAR2 ENCODE chr10:7745420-7745472
64251 chr9 35560823 35560823 1 + C T CESC 35560834 + 35560814 35560854 41 CGAAAAGCCCAGCGGGAGGCCCGGCCCACAAATAGGTGAGA CGAAAAGCCTAGCGGGAGGCCCGGCCCACAAATAGGTGAGA < 41bp 1 0.0904340853711051 1 0.496177911758423 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RUSC2 ENSG00000198853 CDS Human protein_coding chr9:35560834 chr9:35560823 stopgain 0.976 0 10 hm5C_associated_SNPs_17762 0 0 1 DDX6 POSTAR2 ENCODE chr9:35560817-35560849
64251 chr19 50906837 50906837 1 + C T CESC 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTACCTCATCTCTTGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.0789186862141494 1 0.193814843893051 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906837 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_17763 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr19 50906837 50906837 1 + C T CESC 50906851 + 50906831 50906871 41 ATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT ATCTCTTGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT < 41bp 1 0.649283968574148 1 0.893548727035522 experiment 0.701432062851704 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906851 chr19:50906837 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_17764 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr3 141161572 141161572 1 + G A CESC 141161580 + 141161560 141161600 41 AGGAAAAAAGCTGGGAATATCGTTCTTGGAAGACCTTACTG AGGAAAAAAGCTAGGAATATCGTTCTTGGAAGACCTTACTG < 41bp 1 0.186169206501119 1 0.097015768289566 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161580 chr3:141161572 synonymous SNV . 0 13 hm5C_associated_SNPs_17765 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:141161565-141161575
64251 chr19 7987395 7987395 1 + G A CESC 7987382 + 7987362 7987402 41 CTTCCAGAGGAGCTGCCACTCCTGCCCTGCACAGCCCTGGT CTTCCAGAGGAGCTGCCACTCCTGCCCTGCACAACCCTGGT < 41bp 1 0.16596988962714 1 0.499493509531021 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987382 chr19:7987395 nonsynonymous SNV 0.004 0 34 hm5C_associated_SNPs_17767 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:7987368-7987418
64251 chr11 994200 994200 1 + C T CESC 994214 + 994194 994234 41 TGTGGACGTGAACGGGGGTCCTGAGCCTGCCCCAGCCAGTA TGTGGATGTGAACGGGGGTCCTGAGCCTGCCCCAGCCAGTA < 41bp 1 0.461003914276729 1 0.145416498184204 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:994214 chr11:994200 synonymous SNV . 0 7 hm5C_associated_SNPs_17769 0 0 6 BUD13 POSTAR2 ENCODE chr11:994147-994259
64251 chr19 45648494 45648494 1 + C T CESC 45648504 + 45648484 45648524 41 GCCTGGACCTCGACCGTGAACCCAAGAAAGAGGCGGTGAGC GCCTGGACCTTGACCGTGAACCCAAGAAAGAGGCGGTGAGC < 41bp 1 0.482403399113258 1 0.0843452513217926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R37 ENSG00000104866 CDS Human protein_coding chr19:45648504 chr19:45648494 synonymous SNV . 0 11 hm5C_associated_SNPs_17770 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:45648471-45648506
64251 chr7 22896271 22896271 1 + C T CESC 22896268 + 22896248 22896288 41 CTCTAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAA CTCTAATCTGATTTTATGTGCTTTTGCTGTGATGGATTAAA < 41bp 1 0.0463930089078972 1 0.043730765581131 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896268 chr7:22896271 . . 0 24 hm5C_associated_SNPs_17771 0 0 87 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:22896220-22896280
64251 chrX 73043746 73043746 1 - G A CESC 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTTGGAACTACATGCCCTAGGATATAAAAATGATGTT < 41bp 1 0.306833866195599 1 0.512212812900543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043746 . . 0 7 hm5C_associated_SNPs_17772 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043746 73043746 1 - G A CESC 73043738 - 73043718 73043758 41 TTCTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT TTCTGTGGGGCTTGGAACTACATGCCCTAGGATATAAAAAT < 41bp 1 0.0512866145080465 1 0.177982836961746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043738 chrX:73043746 . . 0 13 hm5C_associated_SNPs_17773 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043746 73043746 1 - G A CESC 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG GGTGATTACTTTCTGTGGGGCTTGGAACTACATGCCCTAGG < 41bp 1 0.120193952952019 1 0.138409346342087 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043746 . . 0 23 hm5C_associated_SNPs_17774 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr11 57427146 57427146 1 + C T CESC 57427163 + 57427143 57427183 41 TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCA TTTTACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCA < 41bp 1 0.591811663716977 1 0.213114351034164 experiment 0.816376672566045 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427163 chr11:57427146 synonymous SNV . 0 4 hm5C_associated_SNPs_17775 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:57427140-57427160
64251 chr16 22337573 22337573 1 + G A CESC 22337560 + 22337540 22337580 41 TCGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTG TCGGACCGCATGCTACAGGACACGGTGCTGGCCACCGGTTG < 41bp 1 0.716152101320332 1 0.212366431951523 experiment 0.567695797359336 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337560 chr16:22337573 nonsynonymous SNV 0.745 0 34 hm5C_associated_SNPs_17776 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:22337555-22337578
64251 chr11 4142936 4142936 1 + G T CESC 4142924 + 4142904 4142944 41 AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC AGAACACAGGAAAGGAAGAGCAGCGTGCCAGATATCTTTTC < 41bp 1 0.616148641120294 1 0.492204993963242 experiment 0.767702717759413 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142924 chr11:4142936 nonsynonymous SNV 0.988 4 33 hm5C_associated_SNPs_17777 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:4142923-4142948
64251 chr10 122664255 122664255 1 + C T CESC 122664258 + 122664238 122664278 41 AGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCA AGTCACTACTGTCACCTTGTCAGGCCCCTCTCAGAGCACCA < 41bp 1 0.430956913988995 1 0.799070715904236 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664258 chr10:122664255 nonsynonymous SNV 0.986 5 18 hm5C_associated_SNPs_17781 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:122664237-122664267
64251 chr5 132203226 132203226 1 + C T CESC 132203207 + 132203187 132203227 41 AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTCG AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTTG < 41bp 1 0.486978294555978 1 0.219141155481339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203207 chr5:132203226 synonymous SNV . 0 40 hm5C_associated_SNPs_17782 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203226 132203226 1 + C T CESC 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTGAAGAGTTTGAGAGATCCA < 41bp 1 0.570450892469612 1 0.268151074647903 experiment 0.859098215060776 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203226 synonymous SNV . 0 31 hm5C_associated_SNPs_17783 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr15 63866331 63866331 1 + G A CESC 63866342 + 63866322 63866362 41 CAGAATCTAGAAAGTTTGATCCATTCCTAGGTAAGATATAT CAGAATCTAAAAAGTTTGATCCATTCCTAGGTAAGATATAT < 41bp 1 0.0137638385852621 1 0.0702128410339355 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP3 ENSG00000140455 CDS Human protein_coding chr15:63866342 chr15:63866331 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_17784 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63866324-63866348
64251 chr5 132203229 132203229 1 + G A CESC 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTGAAGAGTTCGAAAGATCCA < 41bp 1 0.609843051819233 1 0.256921231746674 experiment 0.780313896361534 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203229 synonymous SNV . 0 34 hm5C_associated_SNPs_17790 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr3 119205772 119205772 1 + C T CESC 119205764 + 119205744 119205784 41 GAATACACCAAAAACCAGGCCTGGAAATCTATGAAAGTAAT GAATACACCAAAAACCAGGCCTGGAAATTTATGAAAGTAAT < 41bp 1 0.616016686871919 1 0.155491352081299 experiment 0.767966626256162 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119205764 chr3:119205772 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_17791 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119205680-119205826
64251 chr9 117063996 117063996 1 + C T CESC 117063993 + 117063973 117064013 41 CCCCAGAGGGCGGCCCGGCCCCCCGGTAGGTAACTGAGTGC CCCCAGAGGGCGGCCCGGCCCCCTGGTAGGTAACTGAGTGC < 41bp 1 0.232605782449874 1 0.165649235248566 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117063993 chr9:117063996 nonsynonymous SNV 0.819 4 24 hm5C_associated_SNPs_17793 0 0 5 EFTUD2 POSTAR2 ENCODE chr9:117063890-117063997
64251 chr7 56066732 56066732 1 + C G CESC 56066725 + 56066705 56066745 41 ACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACTGA ACTTATTCAGGAAATGGAATCCAGAATGATGATCCCACTGA < 41bp 1 0.748401657755544 1 0.581377565860748 experiment 0.503196684488912 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56066725 chr7:56066732 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_17794 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:56066718-56066758
64251 chr14 77580482 77580482 1 + C T CESC 77580491 + 77580471 77580511 41 AGGAGTTGATTCGTCAGAATCAGGCAACTCAGGTAGAACTA AGGAGTTGATTTGTCAGAATCAGGCAACTCAGGTAGAACTA < 41bp 1 0.669900090416573 1 0.872260510921478 experiment 0.660199819166854 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIPC ENSG00000198894 CDS Human protein_coding chr14:77580491 chr14:77580482 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_17796 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:77580471-77580527
64251 chr5 65118654 65118654 1 + C T CESC 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTTTGGACGGCATGGACATGC < 41bp 1 0.167533898536821 1 0.0930141806602478 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118654 synonymous SNV . 0 23 hm5C_associated_SNPs_17797 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr2 192141714 192141714 1 + C T CESC 192141711 + 192141691 192141731 41 GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAA GAACCTCTCAATGAGGAGACCTTTATCAACAACCTCAAGAA < 41bp 1 0.195933100478737 1 0.0713870823383331 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141711 chr2:192141714 synonymous SNV . 0 24 hm5C_associated_SNPs_17799 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378375 chr2:192141700-192141720
64251 chr7 36445877 36445877 1 + C T CESC 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAGACCTCTGCTTTCAAATGCCTTGGCAACTCCAG < 41bp 1 0.522400196818853 1 0.626441895961761 experiment 0.955199606362294 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445877 nonsynonymous SNV 0.122 1 30 hm5C_associated_SNPs_17800 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr5 132203227 132203227 1 + G C CESC 132203207 + 132203187 132203227 41 AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTCG AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTCC < 41bp 1 0.467669594854941 1 0.415349185466766 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203207 chr5:132203227 nonsynonymous SNV 0.775 0 41 hm5C_associated_SNPs_17801 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203227 132203227 1 + G C CESC 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTGAAGAGTTCCAGAGATCCA < 41bp 1 0.601791936587748 1 0.301874965429306 experiment 0.796416126824503 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203227 nonsynonymous SNV 0.775 0 32 hm5C_associated_SNPs_17802 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203227 132203227 1 + G C CESC 132203226 + 132203206 132203246 41 ACATGGGGGACTGAAGAGTTCGAGAGATCCAAGAGGAAGAA ACATGGGGGACTGAAGAGTTCCAGAGATCCAAGAGGAAGAA < 41bp 1 0.741860964467952 1 0.395063191652298 experiment 0.516278071064096 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203226 chr5:132203227 nonsynonymous SNV 0.775 0 22 hm5C_associated_SNPs_17803 0 0 44 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr1 10328298 10328298 1 + G A CESC 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATAATAAGACCAACCTTTCCACTGAGAAGGTAGG < 41bp 1 0.00212102289131071 1 0.0355300307273865 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328298 nonsynonymous SNV 0.924 2 13 hm5C_associated_SNPs_17804 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chr17 7814210 7814210 1 + G A CESC 7814192 + 7814172 7814212 41 CGCCGGGTCCCTACGCTACACCTCCGGGGTACGGGGCGGCC CGCCGGGTCCCTACGCTACACCTCCGGGGTACGGGGCGACC < 41bp 1 0.096604941989213 1 0.0246374011039734 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7814192 chr17:7814210 nonsynonymous SNV 0.979 2 39 hm5C_associated_SNPs_17805 0 0 1 FXR2 POSTAR2 ENCODE chr17:7814204-7814239
64251 chr17 7814210 7814210 1 + G A CESC 7814203 + 7814183 7814223 41 TACGCTACACCTCCGGGGTACGGGGCGGCCTTCAGCGCCGC TACGCTACACCTCCGGGGTACGGGGCGACCTTCAGCGCCGC < 41bp 1 0.79206829444051 1 0.739974617958069 experiment 0.41586341111898 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7814203 chr17:7814210 nonsynonymous SNV 0.979 2 28 hm5C_associated_SNPs_17806 0 0 1 FXR2 POSTAR2 ENCODE chr17:7814204-7814239
64251 chr19 42364896 42364896 1 + C G CESC 42364907 + 42364887 42364927 41 GTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTGAGTTTGGGG GTCAGAGCTGTGGCAGCCTTCCTCAAAAAGTGAGTTTGGGG < 41bp 1 0.230331632812829 1 0.55123108625412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42364907 chr19:42364896 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_17809 0 0 59 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42364828-42364901
64251 chr3 155628636 155628636 1 + C T CESC 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTTGAGAGATCAAAGAGAGAGTAGGCACGTC < 41bp 1 0.527225276021903 1 0.352770686149597 experiment 0.945549447956195 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628636 stopgain 0.995 0 13 hm5C_associated_SNPs_17810 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155628551-155628653
64251 chrX 64956743 64956743 1 + A G CESC 64956736 + 64956716 64956756 41 TTGAACGGGAGAAGGAGGAGCTGATGGAGAGGCTGAAGCAG TTGAACGGGAGAAGGAGGAGCTGATGGGGAGGCTGAAGCAG < 41bp 1 0.406361188132271 1 0.319242388010025 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956736 chrX:64956743 nonsynonymous SNV 0.995 2 28 hm5C_associated_SNPs_17811 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:64956718-64956750
64251 chr1 161132177 161132177 1 + G T CESC 161132159 + 161132139 161132179 41 AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTCACTGAA AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTCACTTAA < 41bp 1 0.463593064240004 1 0.742682039737701 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161132159 chr1:161132177 stopgain 0.987 0 39 hm5C_associated_SNPs_17813 0 0 5 DDX24 POSTAR2 ENCODE chr1:161132163-161132179
64251 chr21 45546808 45546808 1 + C T CESC 45546824 + 45546804 45546844 41 AAACCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC AAACTTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC < 41bp 1 0.387454958317884 1 0.239395052194595 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45546824 chr21:45546808 nonsynonymous SNV 0.994 2 5 hm5C_associated_SNPs_17815 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:45546785-45546809
64251 chr9 131846984 131846984 1 + C T CESC 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTTAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT < 41bp 1 0.527116705208785 1 0.604248285293579 experiment 0.945766589582429 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131846984 synonymous SNV . 0 6 hm5C_associated_SNPs_17816 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131846965-131847000
64251 chr1 32502584 32502584 1 + G A CESC 32502589 + 32502569 32502609 41 TACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGC TACCTGAACCCTCTCATGGACGTGGGGTGCCAGTGAGAGGC < 41bp 1 0.77382637424248 1 0.493462830781937 experiment 0.45234725151504 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502589 chr1:32502584 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_17817 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr1 32502584 32502584 1 + G A CESC 32502598 + 32502578 32502618 41 CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT CCTCTCATGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT < 41bp 1 0.59821474713066 1 0.356010168790817 experiment 0.803570505738681 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502598 chr1:32502584 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_17818 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr1 32502584 32502584 1 + G A CESC 32502599 + 32502579 32502619 41 CTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCTG CTCTCATGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCTG < 41bp 1 0.783582626760737 1 0.150416374206543 experiment 0.432834746478525 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502599 chr1:32502584 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_17819 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr2 86947866 86947866 1 + G C CESC 86947846 + 86947826 86947866 41 GAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGCTGTGCG GAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGCTGTGCC < 41bp 1 0.760379698068891 1 0.956708788871765 experiment 0.479240603862219 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RMND5A ENSG00000153561 CDS Human protein_coding chr2:86947846 chr2:86947866 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_17822 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:86947839-86947866
64251 chr3 127340586 127340586 1 + G A CESC 127340602 + 127340582 127340622 41 ACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT ACCTAAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT < 41bp 1 0.5985422868964 1 0.870662450790405 experiment 0.8029154262072 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127340602 chr3:127340586 synonymous SNV . 0 5 hm5C_associated_SNPs_17823 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127340515-127340620
64251 chr2 109347309 109347309 1 + G A CESC 109347326 + 109347306 109347346 41 GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG GAAAAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG < 41bp 1 0.0671810335519482 1 0.171215236186981 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347326 chr2:109347309 nonsynonymous SNV 0.870 0 4 hm5C_associated_SNPs_17824 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109347298-109347338
64251 chr12 98995275 98995275 1 + C G CESC 98995269 + 98995249 98995289 41 CCCTCCTCCACCCGAGATGCCAGAGTCTCTGAAGAAGAAGC CCCTCCTCCACCCGAGATGCCAGAGTGTCTGAAGAAGAAGC < 41bp 1 0.590305585282381 1 0.34224009513855 experiment 0.819388829435238 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995269 chr12:98995275 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_17826 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr17 79990299 79990299 1 + G T CESC 79990314 + 79990294 79990334 41 TACACGACCAACGCCTTCCCCGGAGAGTACATCCCCACCGT TACACTACCAACGCCTTCCCCGGAGAGTACATCCCCACCGT < 41bp 1 0.730082709554456 1 0.835151672363281 experiment 0.539834580891088 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990314 chr17:79990299 synonymous SNV . 0 6 hm5C_associated_SNPs_17827 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79990260-79990300
64251 chr6 26022054 26022054 1 + C T CESC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGTGTGAAGCGGATCTCTGGTTTGATCTACGAGGA < 41bp 1 0.702780860392495 1 0.262534618377686 experiment 0.59443827921501 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022054 synonymous SNV . 0 28 hm5C_associated_SNPs_17829 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022038 26022038 1 + G T CESC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGTGTTAAGCGGATCTCTGGTCTGATCTACGAGGA < 41bp 1 0.657341171480775 1 0.355623304843903 experiment 0.68531765703845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022038 synonymous SNV . 0 12 hm5C_associated_SNPs_17830 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr17 38450670 38450670 1 + G T CESC 38450687 + 38450667 38450707 41 CTAGAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT CTATAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT < 41bp 1 0.547075359482236 1 0.327781856060028 experiment 0.905849281035528 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450687 chr17:38450670 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_17831 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38450620-38450675
64251 chr6 36564699 36564699 1 + G C CESC 36564715 + 36564695 36564735 41 ATTTGAAGATCCCCGAGATGCAGCTGATGCAGTCCGAGAGC ATTTCAAGATCCCCGAGATGCAGCTGATGCAGTCCGAGAGC < 41bp 1 0.784509948878752 1 0.405087530612946 experiment 0.430980102242497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564715 chr6:36564699 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_17832 0 0 34 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:36564569-36564739
64251 chr6 26022059 26022059 1 + C T CESC 26022042 + 26022022 26022062 41 CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTAC CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATTTAC < 41bp 1 0.788076655911638 1 0.823338627815247 experiment 0.423846688176724 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022042 chr6:26022059 synonymous SNV . 0 38 hm5C_associated_SNPs_17833 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022059 26022059 1 + C T CESC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATTTACGAGGA < 41bp 1 0.725939071042271 1 0.248045831918716 experiment 0.548121857915459 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022059 synonymous SNV . 0 33 hm5C_associated_SNPs_17834 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr1 201751637 201751637 1 + C T CESC 201751618 + 201751598 201751638 41 ACAGTGCAGAGCCAGGATTCCTGGCTCCTGGAGCCCGTTCT ACAGTGCAGAGCCAGGATTCCTGGCTCCTGGAGCCCGTTTT < 41bp 1 0.319041397975866 1 0.140375226736069 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NAV1 ENSG00000134369 CDS Human protein_coding chr1:201751618 chr1:201751637 nonsynonymous SNV 0.998 2 40 hm5C_associated_SNPs_17835 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:201751637-201751638
64251 chr6 7581100 7581100 1 + C A CESC 7581082 + 7581062 7581102 41 CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCCA CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTACA < 41bp 1 0.283150395412194 1 0.21574479341507 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581082 chr6:7581100 nonsynonymous SNV 0.799 0 39 hm5C_associated_SNPs_17836 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581100 7581100 1 + C A CESC 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TGAAGGACCAGGATATCACGCGGTTACAGAACTCTCTGAAA < 41bp 1 0.190664870181403 1 0.307320892810822 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581100 nonsynonymous SNV 0.799 0 26 hm5C_associated_SNPs_17837 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581100 7581100 1 + C A CESC 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTACAGAACTCTCTGAAAGAGCTGCAGCTGCAG < 41bp 1 0.773221345314904 1 0.410852462053299 experiment 0.453557309370193 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581100 nonsynonymous SNV 0.799 0 11 hm5C_associated_SNPs_17838 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581100 7581100 1 + C A CESC 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TACAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG < 41bp 1 0.69193338717061 1 0.287331998348236 experiment 0.616133225658779 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581100 nonsynonymous SNV 0.799 0 2 hm5C_associated_SNPs_17839 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr17 78022421 78022421 1 + G A CESC 78022426 + 78022406 78022446 41 CCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAG CCCACCCCAGGGAAGAAGACCTGCCAGTGTTCCAGGACCAG < 41bp 1 0.273768611531086 1 0.0435957610607147 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022426 chr17:78022421 nonsynonymous SNV 0.001 0 16 hm5C_associated_SNPs_17840 0 0 2 BUD13 POSTAR2 ENCODE chr17:78022361-78022423
64251 chr11 309109 309109 1 + T C CESC 309126 + 309106 309146 41 ATCTTCATGACCATTCTGCTCATCATCATCCCAGTGTTGGT ATCCTCATGACCATTCTGCTCATCATCATCCCAGTGTTGGT < 41bp 1 0.438399816642613 1 0.031124621629715 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFITM2 ENSG00000185201 CDS Human protein_coding chr11:309126 chr11:309109 nonsynonymous SNV 0.004 1 4 hm5C_associated_SNPs_17842 0 0 5 LARP4 POSTAR2 ENCODE chr11:309105-309176
64251 chr19 1912867 1912867 1 + A G CESC 1912858 + 1912838 1912878 41 CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCG CTGCTCCTTCGCCCCGGCCGCTGCCCCCCGGGCCGTCCGCG < 41bp 1 0.123752453420573 1 0.390876531600952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912858 chr19:1912867 nonsynonymous SNV 0.003 0 30 hm5C_associated_SNPs_17843 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:1912834-1912878
64251 chr2 86712946 86712946 1 + C T CESC 86712950 + 86712930 86712970 41 GCCAAACTACTTTGTTCGGCCAGATCTGGGCCCCAAGATGT GCCAAACTACTTTGTTTGGCCAGATCTGGGCCCCAAGATGT < 41bp 1 0.293635050032219 1 0.385004103183746 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM3A ENSG00000115548 CDS Human protein_coding chr2:86712950 chr2:86712946 nonsynonymous SNV 0.994 5 17 hm5C_associated_SNPs_17844 0 0 6 FMR1 POSTAR2 ENCODE chr2:86712934-86712976
64251 chr7 100210442 100210442 1 + G A CESC 100210428 + 100210408 100210448 41 AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGG AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGAAGCTGG < 41bp 1 0.372898563943667 1 0.289383500814438 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210428 chr7:100210442 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_17845 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210430 + 100210410 100210450 41 CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGAAGCTGGTG < 41bp 1 0.693706024534206 1 0.143152385950089 experiment 0.612587950931588 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210430 chr7:100210442 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_17846 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210431 + 100210411 100210451 41 CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG CTGCATGCGCCGTGGGGCGCCCCAGGACCAGAAGCTGGTGG < 41bp 1 0.497832745675817 1 0.596203625202179 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210431 chr7:100210442 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_17847 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210432 + 100210412 100210452 41 TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG TGCATGCGCCGTGGGGCGCCCCAGGACCAGAAGCTGGTGGG < 41bp 1 0.624898193702754 1 0.779690742492676 experiment 0.750203612594492 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210432 chr7:100210442 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_17848 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210460 + 100210440 100210480 41 AGGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG AGAAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG < 41bp 1 0.303543716154609 1 0.140268415212631 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210460 chr7:100210442 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_17849 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210461 + 100210441 100210481 41 GGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG GAAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG < 41bp 1 0.433470974297572 1 0.10816752910614 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210461 chr7:100210442 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_17850 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210442 100210442 1 + G A CESC 100210462 + 100210442 100210482 41 GAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG AAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG < 41bp 1 0.397840716772914 1 0.422591388225555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210462 chr7:100210442 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_17851 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr19 40884002 40884002 1 + G A CESC 40884016 + 40883996 40884036 41 TTTCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG TTTCCTAAGGGACTGGGACTCCCCTTACAGCCATGACCTTG < 41bp 1 0.469114963268665 1 0.161987245082855 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884016 chr19:40884002 synonymous SNV . 0 7 hm5C_associated_SNPs_17853 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr19 40884002 40884002 1 + G A CESC 40884018 + 40883998 40884038 41 TCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC TCCTAAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC < 41bp 1 0.259193548166149 1 0.0655437409877777 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884018 chr19:40884002 synonymous SNV . 0 5 hm5C_associated_SNPs_17854 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr17 25904637 25904637 1 + C T CESC 25904657 + 25904637 25904677 41 CACCTGCCTGCGGAAGGTGACAGGCCTGGGTACGTGGGGCC TACCTGCCTGCGGAAGGTGACAGGCCTGGGTACGTGGGGCC < 41bp 1 0.559381342277386 1 0.806182384490967 experiment 0.881237315445228 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control KSR1 ENSG00000141068 CDS Human protein_coding chr17:25904657 chr17:25904637 synonymous SNV . 0 1 hm5C_associated_SNPs_17856 0 0 10 BUD13 POSTAR2 ENCODE chr17:25904586-25904663
64251 chr7 100210422 100210422 1 + G C CESC 100210428 + 100210408 100210448 41 AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGG AGCCTGCATGCGCCCTGGGGCGCCCCAGGACCAGGAGCTGG < 41bp 1 0.410527332061924 1 0.178643703460693 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210428 chr7:100210422 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_17857 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210422 100210422 1 + G C CESC 100210430 + 100210410 100210450 41 CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG CCTGCATGCGCCCTGGGGCGCCCCAGGACCAGGAGCTGGTG < 41bp 1 0.659777568841778 1 0.108204871416092 experiment 0.680444862316445 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210430 chr7:100210422 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_17858 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210422 100210422 1 + G C CESC 100210431 + 100210411 100210451 41 CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG CTGCATGCGCCCTGGGGCGCCCCAGGACCAGGAGCTGGTGG < 41bp 1 0.487001751615992 1 0.733282148838043 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210431 chr7:100210422 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_17859 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210422 100210422 1 + G C CESC 100210432 + 100210412 100210452 41 TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG TGCATGCGCCCTGGGGCGCCCCAGGACCAGGAGCTGGTGGG < 41bp 1 0.58432392730896 1 0.671273589134216 experiment 0.83135214538208 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210432 chr7:100210422 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_17860 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr22 38352859 38352859 1 + C T CESC 38352843 + 38352823 38352863 41 CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGCC CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTTAGCC < 41bp 1 0.591050457949479 1 0.579429566860199 experiment 0.817899084101042 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352843 chr22:38352859 stopgain 0.146 0 37 hm5C_associated_SNPs_17861 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr22:38352856-38352880
64251 chr5 231090 231090 1 + A C CESC 231073 + 231053 231093 41 CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAG CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAG < 41bp 1 0.232562925612866 1 0.224183887243271 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:231073 chr5:231090 synonymous SNV . 0 38 hm5C_associated_SNPs_17862 0 0 4 RPS3 POSTAR2 ENCODE chr5:230990-231097
64251 chr7 4824613 4824613 1 + C G CESC 4824600 + 4824580 4824620 41 TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGGCCCGGGA < 41bp 1 0.1228077918567 1 0.202209532260895 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824600 chr7:4824613 nonsynonymous SNV 0.929 1 34 hm5C_associated_SNPs_17866 0 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr7 4824613 4824613 1 + C G CESC 4824610 + 4824590 4824630 41 CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG CCTCTGCCGGCCGCCTGCTGCCGGCCCGGGAGCGGCTTCGG < 41bp 1 0.321748885794218 1 0.522296071052551 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824610 chr7:4824613 nonsynonymous SNV 0.929 1 24 hm5C_associated_SNPs_17867 0 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr6 80744991 80744991 1 + C T CESC 80744989 + 80744969 80745009 41 TTGTTTAATTGCAGTGAAATCACGGACCAGTACATCTACAT TTGTTTAATTGCAGTGAAATCATGGACCAGTACATCTACAT < 41bp 1 0.525777028501912 1 0.887823939323425 experiment 0.948445942996176 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTK ENSG00000112742 CDS Human protein_coding chr6:80744989 chr6:80744991 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_17868 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:80744980-80745000
64251 chr11 6631790 6631790 1 + G A CESC 6631793 + 6631773 6631813 41 TGAAGACCCTGCAAAGCGACCCAAATTTGACATGATTGTGC TGAAGACCCTGCAAAGCAACCCAAATTTGACATGATTGTGC < 41bp 1 0.275070790660645 1 0.0712427198886871 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631793 chr11:6631790 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_17873 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:6631730-6631833
64251 chrX 128695239 128695239 1 + G C CESC 128695224 + 128695204 128695244 41 TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGTT TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGACAGGTT < 41bp 1 0.0911829547674678 1 0.074910044670105 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128695224 chrX:128695239 nonsynonymous SNV 0.988 2 36 hm5C_associated_SNPs_17874 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:128695166-128695244
64251 chr7 100486133 100486133 1 + G A CESC 100486138 + 100486118 100486158 41 CCATTGTGGAATATCGGGACCTGGATGCCCCAGACGATGTT CCATTGTGGAATATCAGGACCTGGATGCCCCAGACGATGTT < 41bp 1 0.702992224235365 1 0.438530623912811 experiment 0.59401555152927 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100486138 chr7:100486133 nonsynonymous SNV 0.991 3 16 hm5C_associated_SNPs_17875 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:100486080-100486140
64251 chr11 119045980 119045980 1 + C G CESC 119045961 + 119045941 119045981 41 GCTGCCTCTGCGGGCTCTGCCTCTGCTCTTCAACCTGATCA GCTGCCTCTGCGGGCTCTGCCTCTGCTCTTCAACCTGATGA < 41bp 1 0.344021158317805 1 0.423903077840805 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045961 chr11:119045980 nonsynonymous SNV 0.998 2 40 hm5C_associated_SNPs_17877 0 0 1 PRPF8 POSTAR2 ENCODE chr11:119045962-119046036
64251 chr3 41275108 41275108 1 + C G CESC 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGCTGGAATTCTTTGTAACCTCACTTGCAAT < 41bp 1 0.264151039792226 1 0.314148753881454 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275108 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_17878 0 0 29 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr17 27938969 27938969 1 + G C CESC 27938953 + 27938933 27938973 41 GCCATCACTGCAGAAGAATACTTCAACCCCAACTTTGAGCT GCCATCACTGCAGAAGAATACTTCAACCCCAACTTTCAGCT < 41bp 1 0.328853932194364 1 0.249121427536011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD13B ENSG00000198720 CDS Human protein_coding chr17:27938953 chr17:27938969 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_17879 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:27938948-27938979
64251 chr7 33014871 33014871 1 + C T CESC 33014888 + 33014868 33014908 41 GTTCAGATTCACACCTATTTCAAGCCCCCGAGTTGCCCTCG GTTTAGATTCACACCTATTTCAAGCCCCCGAGTTGCCCTCG < 41bp 1 0.524284457935168 1 0.736395001411438 experiment 0.951431084129663 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP9 ENSG00000122642 CDS Human protein_coding chr7:33014888 chr7:33014871 stopgain 0.998 1 4 hm5C_associated_SNPs_17880 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:33014841-33014874
64251 chr6 36564728 36564728 1 + C T CESC 36564724 + 36564704 36564744 41 TCCCCGAGATGCAGCTGATGCAGTCCGAGAGCTAGATGGAA TCCCCGAGATGCAGCTGATGCAGTTCGAGAGCTAGATGGAA < 41bp 1 0.340271182153389 1 0.182781428098679 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564724 chr6:36564728 synonymous SNV . 0 25 hm5C_associated_SNPs_17881 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:36564702-36564730
64251 chr6 36564728 36564728 1 + C T CESC 36564735 + 36564715 36564755 41 CAGCTGATGCAGTCCGAGAGCTAGATGGAAGGTGATTTAAT CAGCTGATGCAGTTCGAGAGCTAGATGGAAGGTGATTTAAT < 41bp 1 0.713115987402331 1 0.62789922952652 experiment 0.573768025195338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564735 chr6:36564728 synonymous SNV . 0 14 hm5C_associated_SNPs_17882 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:36564702-36564730
64251 chr20 47691934 47691934 1 + C A CESC 47691921 + 47691901 47691941 41 ATGCAAGTTTTTTGAGGGACCTGTGACAGGAATCTTCTCTG ATGCAAGTTTTTTGAGGGACCTGTGACAGGAATATTCTCTG < 41bp 1 0.486920887937886 1 0.237718135118484 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47691921 chr20:47691934 synonymous SNV . 0 34 hm5C_associated_SNPs_17883 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47691864-47692051
64251 chr6 32134696 32134696 1 + C T CESC 32134701 + 32134681 32134721 41 CCTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTC CCTCAGCCATCTGCGTCAAGCCTTGCCTGAACGGAGGCGTC < 41bp 1 0.0620264518929349 1 0.038166880607605 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134701 chr6:32134696 nonsynonymous SNV 0.994 0 16 hm5C_associated_SNPs_17884 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:32134668-32134707
64251 chr6 32134696 32134696 1 + C T CESC 32134702 + 32134682 32134722 41 CTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTCT CTCAGCCATCTGCGTCAAGCCTTGCCTGAACGGAGGCGTCT < 41bp 1 0.202785606728345 1 0.0347771942615509 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134702 chr6:32134696 nonsynonymous SNV 0.994 0 15 hm5C_associated_SNPs_17885 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:32134668-32134707
64251 chr6 44221279 44221279 1 + G T CESC 44221288 + 44221268 44221308 41 CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT CAGTTCCTGATTAGATCCCCCCTCTCGAGGGCGATGAGGAT < 41bp 1 0.0323908330181465 1 0.0409020185470581 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221288 chr6:44221279 stopgain 0.997 0 12 hm5C_associated_SNPs_17886 0 0 46 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44221279 44221279 1 + G T CESC 44221289 + 44221269 44221309 41 AGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG AGTTCCTGATTAGATCCCCCCTCTCGAGGGCGATGAGGATG < 41bp 1 0.25058807428027 1 0.0932473540306091 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221289 chr6:44221279 stopgain 0.997 0 11 hm5C_associated_SNPs_17887 0 0 46 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr16 11066827 11066827 1 + G A CESC 11066834 + 11066814 11066854 41 GCACTACATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA GCACTACATCCGAAATAAAACTGCTGTTCCTTACTTCTCCA < 41bp 1 0.342471351488011 1 0.0396578907966614 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11066834 chr16:11066827 nonsynonymous SNV 0.998 3 14 hm5C_associated_SNPs_17888 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:11066817-11066855
64251 chr11 68131409 68131409 1 + T A CESC 68131399 + 68131379 68131419 41 TCCAGGTGCTGAGCCAGGAGCGGCAGCCTTTCTGTGAGTGC TCCAGGTGCTGAGCCAGGAGCGGCAGCCTTACTGTGAGTGC < 41bp 1 0.706838840415803 1 0.43895098567009 experiment 0.586322319168394 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68131399 chr11:68131409 nonsynonymous SNV 0.977 1 31 hm5C_associated_SNPs_17890 0 0 5 EIF3H POSTAR2 ENCODE chr11:68131370-68131411
64251 chr11 68131409 68131409 1 + T A CESC 68131406 + 68131386 68131426 41 GCTGAGCCAGGAGCGGCAGCCTTTCTGTGAGTGCCGGCTGG GCTGAGCCAGGAGCGGCAGCCTTACTGTGAGTGCCGGCTGG < 41bp 1 0.149567336558328 1 0.093495100736618 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68131406 chr11:68131409 nonsynonymous SNV 0.977 1 24 hm5C_associated_SNPs_17891 0 0 5 EIF3H POSTAR2 ENCODE chr11:68131370-68131411
64251 chr11 68131409 68131409 1 + T A CESC 68131410 + 68131390 68131430 41 AGCCAGGAGCGGCAGCCTTTCTGTGAGTGCCGGCTGGGGCG AGCCAGGAGCGGCAGCCTTACTGTGAGTGCCGGCTGGGGCG < 41bp 1 0.543898275630089 1 0.343025147914886 experiment 0.912203448739821 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68131410 chr11:68131409 nonsynonymous SNV 0.977 1 20 hm5C_associated_SNPs_17892 0 0 5 EIF3H POSTAR2 ENCODE chr11:68131370-68131411
64251 chr1 207510124 207510124 1 + C G CESC 207510119 + 207510099 207510139 41 AACTACAGAAGTCTCACCAACTTCTCAGAAAACCACCACAA AACTACAGAAGTCTCACCAACTTCTGAGAAAACCACCACAA < 41bp 1 0.432278578537792 1 0.714024066925049 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207510119 chr1:207510124 nonsynonymous SNV 0.100 2 26 hm5C_associated_SNPs_17895 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr1:207510106-207510126
64251 chr6 161519323 161519323 1 + C G CESC 161519314 + 161519294 161519334 41 TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACGCG TTTCTTCTTGTCTTAGCACTCGGAGCATGGCTTCCGACGCG < 41bp 1 0.724375025478723 1 0.973347783088684 experiment 0.551249949042554 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519314 chr6:161519323 nonsynonymous SNV 0.889 1 30 hm5C_associated_SNPs_17896 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:161519304-161519325
64251 chr16 23578363 23578363 1 + C T CESC 23578358 + 23578338 23578378 41 TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC TAAAAAATGTGGTCAGTGAACCTATTGAAGGACATGAAGAC < 41bp 1 0.0924726569222001 1 0.117422729730606 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23578358 chr16:23578363 synonymous SNV . 0 26 hm5C_associated_SNPs_17900 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:23578290-23578386
64251 chr5 21497232 21497232 1 + G C CESC 21497215 + 21497195 21497235 41 TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAC TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGACAAC < 41bp 1 0.286015592983598 1 0.824193477630615 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21497215 chr5:21497232 . . 0 38 hm5C_associated_SNPs_17901 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:21497224-21497246
64251 chr5 179151711 179151711 1 + G A CESC 179151698 + 179151678 179151718 41 GTATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAG GTATAAGAAAACTGATGCACCTCAACCGGATGTAAAGGAAG < 41bp 1 0.505180658193162 1 0.476354748010635 experiment 0.989638683613675 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151698 chr5:179151711 synonymous SNV . 0 34 hm5C_associated_SNPs_17902 0 0 37 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151711 179151711 1 + G A CESC 179151700 + 179151680 179151720 41 ATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAG ATAAGAAAACTGATGCACCTCAACCGGATGTAAAGGAAGAG < 41bp 1 0.248612934728224 1 0.193378061056137 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151700 chr5:179151711 synonymous SNV . 0 32 hm5C_associated_SNPs_17903 0 0 37 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151711 179151711 1 + G A CESC 179151704 + 179151684 179151724 41 GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAG GAAAACTGATGCACCTCAACCGGATGTAAAGGAAGAGGAAG < 41bp 1 0.498066983364009 1 0.590577304363251 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151704 chr5:179151711 synonymous SNV . 0 28 hm5C_associated_SNPs_17904 0 0 37 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr1 984694 984694 1 + G T CESC 984697 + 984677 984717 41 TGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC TGGCACCGCCTGGAGCTTTCCCGGCACTGGCGCCGGGGCAC < 41bp 1 0.352259391476932 1 0.770837783813477 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984697 chr1:984694 synonymous SNV . 0 18 hm5C_associated_SNPs_17905 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984694 984694 1 + G T CESC 984701 + 984681 984721 41 ACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACCCTC ACCGCCTGGAGCTTTCCCGGCACTGGCGCCGGGGCACCCTC < 41bp 1 0.222373450678542 1 0.334635525941849 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984701 chr1:984694 synonymous SNV . 0 14 hm5C_associated_SNPs_17906 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984694 984694 1 + G T CESC 984709 + 984689 984729 41 GAGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGA GAGCTTTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGA < 41bp 1 0.40195136240585 1 0.787657260894775 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984709 chr1:984694 synonymous SNV . 0 6 hm5C_associated_SNPs_17907 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984694 984694 1 + G T CESC 984710 + 984690 984730 41 AGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT AGCTTTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT < 41bp 1 0.471770558760449 1 0.832979679107666 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984710 chr1:984694 synonymous SNV . 0 5 hm5C_associated_SNPs_17908 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr7 101813778 101813778 1 + C T CESC 101813790 + 101813770 101813810 41 GCTCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA GCTCTCATTGGCCAATCACTCCCTCCAGCTGGCCTCACAGA < 41bp 1 0.0561730563450632 1 0.543950140476227 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101813790 chr7:101813778 nonsynonymous SNV 0.972 1 9 hm5C_associated_SNPs_17910 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:101813761-101813784
64251 chr9 135919210 135919210 1 + G A CESC 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCCGGCCCGAGAAGAAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.043657987047937 1 0.0144115686416626 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919210 nonsynonymous SNV 0.778 1 16 hm5C_associated_SNPs_17911 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:135919177-135919215
64251 chr12 102517807 102517807 1 + G A CESC 102517803 + 102517783 102517823 41 GGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGGTTG GGCATTGCAGCTTTCTATGGCGGAAAACAACAAACAGGTTG < 41bp 1 0.781485753869965 1 0.5703005194664 experiment 0.43702849226007 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARPBP ENSG00000185480 CDS Human protein_coding chr12:102517803 chr12:102517807 synonymous SNV . 0 25 hm5C_associated_SNPs_17912 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102517707-102517816
64251 chr6 26022062 26022062 1 + C T CESC 26022042 + 26022022 26022062 41 CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTAC CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTAT < 41bp 1 0.785877578295208 1 0.880582451820374 experiment 0.428244843409584 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022042 chr6:26022062 synonymous SNV . 0 41 hm5C_associated_SNPs_17923 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022062 26022062 1 + C T CESC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTATGAGGA < 41bp 1 0.67050840474955 1 0.387178927659988 experiment 0.6589831905009 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022062 synonymous SNV . 0 36 hm5C_associated_SNPs_17924 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022035 26022035 1 + T G CESC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGGGTGAAGCGGATCTCTGGTCTGATCTACGAGGA < 41bp 1 0.759162114216494 1 0.362778007984161 experiment 0.481675771567012 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022035 synonymous SNV . 0 9 hm5C_associated_SNPs_17925 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 7572161 7572161 1 + C G CESC 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACAAGGAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT < 41bp 1 0.212490727448096 1 0.111230611801147 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572161 nonsynonymous SNV 0.999 1 6 hm5C_associated_SNPs_17927 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7572126-7572168
64251 chr19 10893714 10893714 1 + G C CESC 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGACGAAGTTCTTCCTCTCCCACCCGGCCTA < 41bp 1 0.162667422984035 1 0.101441025733948 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893714 nonsynonymous SNV 0.992 4 14 hm5C_associated_SNPs_17928 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:10893688-10893718
64251 chr19 10893713 10893713 1 + A G CESC 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGGGGAAGTTCTTCCTCTCCCACCCGGCCTA < 41bp 1 0.251209109299259 1 0.395255118608475 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893713 nonsynonymous SNV 0.986 4 13 hm5C_associated_SNPs_17929 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr19:10893674-10893713
64251 chr2 32613928 32613928 1 + G A CESC 32613943 + 32613923 32613963 41 GTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACC GTGGCATCCTCAGTGATGGACAGATTGTCTTACCTCTTACC < 41bp 1 0.105331554406996 1 0.542723417282104 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32613943 chr2:32613928 synonymous SNV . 0 6 hm5C_associated_SNPs_17930 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32613855-32613940
64251 chr16 67578977 67578977 1 + T C CESC 67578992 + 67578972 67579012 41 CAGTATGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC CAGTACGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC < 41bp 1 0.0972813054472335 1 0.199976831674576 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578992 chr16:67578977 synonymous SNV . 0 6 hm5C_associated_SNPs_17931 0 0 2 LSM11 POSTAR2 ENCODE chr16:67578976-67579021
64251 chr17 80684800 80684800 1 + C G CESC 80684806 + 80684786 80684826 41 AGCAGAGGATTCCTCTGGGCCGGTGATTTTTGACCCAGCTT AGCAGAGGATTCCTGTGGGCCGGTGATTTTTGACCCAGCTT < 41bp 1 0.417676056090803 1 0.502630770206451 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684806 chr17:80684800 nonsynonymous SNV 0.752 2 15 hm5C_associated_SNPs_17932 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:80684779-80684807
64251 chr11 67052376 67052376 1 + C T CESC 67052374 + 67052354 67052394 41 ACATGTCCAAGATGGGCAACCCCTTCCTGACCCAGTGGCAG ACATGTCCAAGATGGGCAACCCTTTCCTGACCCAGTGGCAG < 41bp 1 0.0195197601440768 1 0.0546295046806335 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052374 chr11:67052376 synonymous SNV . 0 23 hm5C_associated_SNPs_17933 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67052341-67052404
64251 chr22 29439407 29439407 1 + C T CESC 29439389 + 29439369 29439409 41 TCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACCGC TCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACTGC < 41bp 1 0.283121354215765 1 0.306246042251587 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29439389 chr22:29439407 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_17934 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:29439379-29439476
64251 chr5 176733449 176733449 1 + G T CESC 176733429 + 176733409 176733449 41 GCCGTTCGCGACAGGCGAGGCCCCTTCCAAAACACTTGTTG GCCGTTCGCGACAGGCGAGGCCCCTTCCAAAACACTTGTTT < 41bp 1 0.156622719023616 1 0.0505133867263794 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176733429 chr5:176733449 stopgain 1.000 1 41 hm5C_associated_SNPs_17939 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:176733440-176733460
64251 chr7 2416588 2416588 1 + G A CESC 2416581 + 2416561 2416601 41 TGGTGTGTCCCTGCCCTGGCCTAGGTGGACAACGCGTACTG TGGTGTGTCCCTGCCCTGGCCTAGGTGAACAACGCGTACTG < 41bp 1 0.544830563561651 1 0.47316038608551 experiment 0.910338872876698 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2416581 chr7:2416588 nonsynonymous SNV 0.922 4 28 hm5C_associated_SNPs_17940 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2416580-2416600
64251 chr1 43827910 43827910 1 + A C CESC 43827926 + 43827906 43827946 41 TCTCAGGCCATGGCTTTGCACAGAACCAGCTAGTTATTTGG TCTCCGGCCATGGCTTTGCACAGAACCAGCTAGTTATTTGG < 41bp 1 0.67299879371149 1 0.178612470626831 experiment 0.65400241257702 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC20 ENSG00000117399 CDS Human protein_coding chr1:43827926 chr1:43827910 synonymous SNV . 0 5 hm5C_associated_SNPs_17941 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:43827882-43827911
64251 chr2 27459279 27459279 1 + G C CESC 27459284 + 27459264 27459304 41 CAATGCGTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTC CAATGCGTGGAGCTGCGGGCCGGCGTCTCTCTTCCTTTGTC < 41bp 1 0.465228307591719 1 0.679725885391235 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27459284 chr2:27459279 nonsynonymous SNV 0.995 2 16 hm5C_associated_SNPs_17942 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:27459260-27459280
64251 chr13 76395533 76395533 1 + C T CESC 76395515 + 76395495 76395535 41 CTTTTGCAAAAAGAGAGGACCGTGTAACAACTGAAATTCAG CTTTTGCAAAAAGAGAGGACCGTGTAACAACTGAAATTTAG < 41bp 1 0.12454054732548 1 0.0987472236156464 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76395515 chr13:76395533 stopgain 0.328 0 39 hm5C_associated_SNPs_17943 0 0 3 AGGF1 POSTAR2 ENCODE chr13:76395514-76395605
64251 chr19 13248327 13248327 1 + G A CESC 13248325 + 13248305 13248345 41 AACAGCTGCGGCACCGGCATCCGCTCTTCTACCAACGATCC AACAGCTGCGGCACCGGCATCCACTCTTCTACCAACGATCC < 41bp 1 0.0864305062518871 1 0.0666761100292206 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NACC1 ENSG00000160877 CDS Human protein_coding chr19:13248325 chr19:13248327 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_17944 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:13248305-13248337
64251 chr1 8030977 8030977 1 + G A CESC 8030961 + 8030941 8030981 41 TTCTTTTCACTAGTCTGCTGCTGTGAAGGAGATACTGAAGG TTCTTTTCACTAGTCTGCTGCTGTGAAGGAGATACTAAAGG < 41bp 1 0.174544198359585 1 0.167784661054611 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PARK7 ENSG00000116288 CDS Human protein_coding chr1:8030961 chr1:8030977 synonymous SNV . 0 37 hm5C_associated_SNPs_17945 0 0 21 TARDBP POSTAR2 DRA001158,DRS012386 chr1:8030953-8030987
64251 chr1 8030977 8030977 1 + G A CESC 8030975 + 8030955 8030995 41 CTGCTGCTGTGAAGGAGATACTGAAGGAGCAGGAAAACCGG CTGCTGCTGTGAAGGAGATACTAAAGGAGCAGGAAAACCGG < 41bp 1 0.735811346828221 1 0.758861124515533 experiment 0.528377306343558 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PARK7 ENSG00000116288 CDS Human protein_coding chr1:8030975 chr1:8030977 synonymous SNV . 0 23 hm5C_associated_SNPs_17946 0 0 21 TARDBP POSTAR2 DRA001158,DRS012386 chr1:8030953-8030987
64251 chr14 102805188 102805188 1 + G T CESC 102805183 + 102805163 102805203 41 CATTAGGAATCACAGAATTCCTACGGAAGAAAGAAATACAC CATTAGGAATCACAGAATTCCTACGTAAGAAAGAAATACAC < 41bp 1 0.435784978331259 1 0.453522086143494 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102805183 chr14:102805188 synonymous SNV . 0 26 hm5C_associated_SNPs_17947 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102805175-102805210
64251 chr13 76430740 76430740 1 + C T CESC 76430734 + 76430714 76430754 41 TACTGCAACGACTGCTATCTCAGATTCAAATGTAAGAGAGC TACTGCAACGACTGCTATCTCAGATTTAAATGTAAGAGAGC < 41bp 1 0.374929475601992 1 0.674560844898224 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76430734 chr13:76430740 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_17949 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr13:76430737-76430758
64251 chr7 151818021 151818021 1 + G A CESC 151818003 + 151817983 151818023 41 CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACAGG < 41bp 1 0.40392153011075 1 0.0926429629325867 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151818003 chr7:151818021 nonsynonymous SNV 0.998 0 39 hm5C_associated_SNPs_17950 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:151818014-151818039
64251 chr19 33202723 33202723 1 + G A CESC 33202731 + 33202711 33202751 41 GAAAAAAAGACTGAGGAAATCATGAAGGAAGGCAAGCAGTT GAAAAAAAGACTAAGGAAATCATGAAGGAAGGCAAGCAGTT < 41bp 1 0.51693569022322 1 0.271004915237427 experiment 0.966128619553559 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202731 chr19:33202723 nonsynonymous SNV 0.992 3 13 hm5C_associated_SNPs_17951 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:33202665-33202757
64251 chr11 67069681 67069681 1 + G C CESC 67069687 + 67069667 67069707 41 GTCCACCCAGCTTTGAAGAGCAGCTGCGCCTGGCCCTGGAG GTCCACCCAGCTTTCAAGAGCAGCTGCGCCTGGCCCTGGAG < 41bp 1 0.492949964789194 1 0.354198336601257 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKRD13D ENSG00000172932 CDS Human protein_coding chr11:67069687 chr11:67069681 nonsynonymous SNV 0.996 2 15 hm5C_associated_SNPs_17952 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:67069673-67069711
64251 chr13 111287908 111287908 1 + C T CESC 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTCCAGAAAGGAGAGTGCGACATCCTCTCCAACGGCCA < 41bp 1 0.735590439190307 1 0.440399020910263 experiment 0.528819121619386 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287908 nonsynonymous SNV 0.011 0 19 hm5C_associated_SNPs_17953 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111287898-111287936
64251 chr5 176721900 176721900 1 + G T CESC 176721903 + 176721883 176721923 41 AGAAAGGCTGTGTGTCAGATCCTCTTCAGACATCTGGGAAA AGAAAGGCTGTGTGTCATATCCTCTTCAGACATCTGGGAAA < 41bp 1 0.0760805434175162 1 0.103426784276962 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721903 chr5:176721900 nonsynonymous SNV 0.011 2 18 hm5C_associated_SNPs_17954 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176721882-176721917
64251 chr2 236817440 236817440 1 + T A CESC 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGACCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT < 41bp 1 0.115909746949317 1 0.0604491531848907 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817440 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_17959 0 0 4 DDX24 POSTAR2 ENCODE chr2:236817392-236817470
64251 chr2 74425844 74425844 1 + C T CESC 74425852 + 74425832 74425872 41 TCCCTTCGCCTTCGCCCTTTCCACCTCGCGGCAGTTCGGTA TCCCTTCGCCTTTGCCCTTTCCACCTCGCGGCAGTTCGGTA < 41bp 1 0.242536104553837 1 0.253882199525833 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74425852 chr2:74425844 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_17960 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74425713-74425863
64251 chr12 57970115 57970115 1 + C T CESC 57970126 + 57970106 57970146 41 GCCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGACCAT GCCCGGCTCTGGGACGAGATCAACGAGAAGCAGAAGACCAT < 41bp 1 0.638578428924986 1 0.518194794654846 experiment 0.722843142150027 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF5A ENSG00000155980 CDS Human protein_coding chr12:57970126 chr12:57970115 nonsynonymous SNV 0.997 5 10 hm5C_associated_SNPs_17961 0 0 1 BUD13 POSTAR2 ENCODE chr12:57970078-57970119
64251 chr19 50338793 50338793 1 + G T CESC 50338810 + 50338790 50338830 41 GATGGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTC GATTGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTC < 41bp 1 0.691571785885578 1 0.390718698501587 experiment 0.616856428228845 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50338810 chr19:50338793 nonsynonymous SNV 0.993 2 4 hm5C_associated_SNPs_17962 0 0 1 TBRG4 POSTAR2 ENCODE chr19:50338788-50338828
64251 chr19 50338793 50338793 1 + G T CESC 50338812 + 50338792 50338832 41 TGGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTCTG TTGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTCTG < 41bp 1 0.488185600834298 1 0.812122583389282 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50338812 chr19:50338793 nonsynonymous SNV 0.993 2 2 hm5C_associated_SNPs_17963 0 0 1 TBRG4 POSTAR2 ENCODE chr19:50338788-50338828
64251 chr7 65419185 65419185 1 + C T CESC 65419170 + 65419150 65419190 41 TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATTGTCAC < 41bp 1 0.747059914532858 1 0.806309938430786 experiment 0.505880170934285 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419170 chr7:65419185 nonsynonymous SNV 0.648 2 36 hm5C_associated_SNPs_17964 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:65419150-65419210
64251 chr19 42729913 42729913 1 + C T CESC 42729916 + 42729896 42729936 41 CTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACC CTCCAAGTCCTTTGCCTTAGCTTCCCGGCTGTCCCGGCACC < 41bp 1 0.222806937575039 1 0.109070897102356 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729916 chr19:42729913 nonsynonymous SNV 0.069 0 18 hm5C_associated_SNPs_17965 0 0 2 RBM15 POSTAR2 ENCODE chr19:42729889-42729947
64251 chr5 154330464 154330464 1 + C T CESC 154330472 + 154330452 154330492 41 AAATTGTTTATCCTCCACAACTGCCTGGAGAACCTCGGAGA AAATTGTTTATCTTCCACAACTGCCTGGAGAACCTCGGAGA < 41bp 1 0.457394241984922 1 0.0388093292713165 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330472 chr5:154330464 nonsynonymous SNV 0.792 4 13 hm5C_associated_SNPs_17966 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154330431-154330469
64251 chr4 53579422 53579422 1 + T C CESC 53579420 + 53579400 53579440 41 CAAAGCACCCTTTCCTGTGCCCTTTTAAGGTTGACCCAGTG CAAAGCACCCTTTCCTGTGCCCCTTTAAGGTTGACCCAGTG < 41bp 1 0.0313316699620726 1 0.0687021315097809 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579420 chr4:53579422 . . 0 23 hm5C_associated_SNPs_17967 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579422 53579422 1 + T C CESC 53579434 + 53579414 53579454 41 CTGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAA CTGTGCCCCTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAA < 41bp 1 0.0995619769422748 1 0.135034918785095 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579434 chr4:53579422 . . 0 9 hm5C_associated_SNPs_17968 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579422 53579422 1 + T C CESC 53579435 + 53579415 53579455 41 TGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAAC TGTGCCCCTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAAC < 41bp 1 0.115135460676861 1 0.237042337656021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579435 chr4:53579422 . . 0 8 hm5C_associated_SNPs_17969 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579422 53579422 1 + T C CESC 53579436 + 53579416 53579456 41 GTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACA GTGCCCCTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACA < 41bp 1 0.299576789416521 1 0.690799176692963 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579436 chr4:53579422 . . 0 7 hm5C_associated_SNPs_17970 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chr4 53579422 53579422 1 + T C CESC 53579441 + 53579421 53579461 41 CTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACACAGAA CCTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACACAGAA < 41bp 1 0.249045814611827 1 0.134216547012329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579441 chr4:53579422 . . 0 2 hm5C_associated_SNPs_17971 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:53579400-53579440
64251 chrX 64956699 64956699 1 + G A CESC 64956685 + 64956665 64956705 41 TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAGAAGGAG TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAAAAGGAG < 41bp 1 0.506666554817773 1 0.635730504989624 experiment 0.986666890364454 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956685 chrX:64956699 synonymous SNV . 0 35 hm5C_associated_SNPs_17972 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956699 64956699 1 + G A CESC 64956695 + 64956675 64956715 41 GAAGAAGAAGCGTGAAATGGCAGAGAAGGAGAAAGAGAAGA GAAGAAGAAGCGTGAAATGGCAGAAAAGGAGAAAGAGAAGA < 41bp 1 0.655810121346666 1 0.372578322887421 experiment 0.688379757306667 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956695 chrX:64956699 synonymous SNV . 0 25 hm5C_associated_SNPs_17973 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chr19 50155928 50155928 1 + C G CESC 50155914 + 50155894 50155934 41 GATCGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTCCTCTTC GATCGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTGCTCTTC < 41bp 1 0.279423274342663 1 0.0574779510498047 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155914 chr19:50155928 nonsynonymous SNV 0.115 3 35 hm5C_associated_SNPs_17974 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50155895-50155933
64251 chr11 9459820 9459820 1 + G A CESC 9459830 + 9459810 9459850 41 AGCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGG AGCTGAAGATAATGATGAAACCGGTAAGGGATTTTCAATGG < 41bp 1 0.527954115717276 1 0.169523477554321 experiment 0.944091768565449 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459830 chr11:9459820 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_17975 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9459761-9459826
64251 chr11 9459820 9459820 1 + G A CESC 9459831 + 9459811 9459851 41 GCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGGA GCTGAAGATAATGATGAAACCGGTAAGGGATTTTCAATGGA < 41bp 1 0.681731894193199 1 0.386144578456879 experiment 0.636536211613601 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459831 chr11:9459820 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_17976 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9459761-9459826
64251 chr5 149755822 149755822 1 + G A CESC 149755829 + 149755809 149755849 41 CCAGAGACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG CCAGAGACCAGCAAAGGATTCTTCAAGCAGTGAGGAATCAG < 41bp 1 0.307290933964142 1 0.183275938034058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755829 chr5:149755822 nonsynonymous SNV 0.021 1 14 hm5C_associated_SNPs_17977 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:149755819-149755836
64251 chr5 149755822 149755822 1 + G A CESC 149755836 + 149755816 149755856 41 CCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAGATAGTGA CCAGCAAAGGATTCTTCAAGCAGTGAGGAATCAGATAGTGA < 41bp 1 0.29355327080066 1 0.348909080028534 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755836 chr5:149755822 nonsynonymous SNV 0.021 1 7 hm5C_associated_SNPs_17978 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:149755819-149755836
64251 chrX 129149410 129149410 1 + C T CESC 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GTAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC < 41bp 1 0.0251903269891648 1 0.12527459859848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149410 stopgain 1.000 0 2 hm5C_associated_SNPs_17979 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149400-129149420
64251 chr19 42729186 42729186 1 + G C CESC 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA CAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA < 41bp 1 0.0993684287158839 1 0.0767724812030792 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729186 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_17980 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42729180-42729200
64251 chr1 43893266 43893266 1 + C T CESC 43893251 + 43893231 43893271 41 CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAG CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGTGTCAG < 41bp 1 0.257343007727663 1 0.864455342292786 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893251 chr1:43893266 nonsynonymous SNV 0.962 2 36 hm5C_associated_SNPs_17981 0 0 3 GRWD1 POSTAR2 ENCODE chr1:43893234-43893330
64251 chr2 216197200 216197200 1 + G A CESC 216197204 + 216197184 216197224 41 TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCC TTTAGGTATTCCAGCCACTGCCTCTTTCAAACATGTCAGCC < 41bp 1 0.0589710248876543 1 0.18862783908844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197204 chr2:216197200 nonsynonymous SNV 0.740 4 17 hm5C_associated_SNPs_17982 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:216197189-216197210
64251 chr2 216197200 216197200 1 + G A CESC 216197205 + 216197185 216197225 41 TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCCC TTAGGTATTCCAGCCACTGCCTCTTTCAAACATGTCAGCCC < 41bp 1 0.354662694719638 1 0.347110629081726 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197205 chr2:216197200 nonsynonymous SNV 0.740 4 16 hm5C_associated_SNPs_17983 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:216197189-216197210
64251 chr12 110456186 110456186 1 + G A CESC 110456173 + 110456153 110456193 41 CCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATC CCTTGGTTTCTAGAATATGCCCAAATGATGTCTATCGCATC < 41bp 1 0.38174768844194 1 0.610100746154785 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456173 chr12:110456186 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_17985 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr12 110456186 110456186 1 + G A CESC 110456174 + 110456154 110456194 41 CTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATCT CTTGGTTTCTAGAATATGCCCAAATGATGTCTATCGCATCT < 41bp 1 0.335036996029967 1 0.149074465036392 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456174 chr12:110456186 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_17986 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr12 57604635 57604635 1 + G A CESC 57604652 + 57604632 57604672 41 CCCGGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC CCCAGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC < 41bp 1 0.159065700549351 1 0.287433683872223 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604652 chr12:57604635 nonsynonymous SNV 0.994 0 4 hm5C_associated_SNPs_17988 0 0 1 DDX55 POSTAR2 ENCODE chr12:57604608-57604662
64251 chr16 85839345 85839345 1 + G A CESC 85839335 + 85839315 85839355 41 AATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTC AATGGCTGTCCTCTCTGCCCCCAGTGTATCACATTAAGTTC < 41bp 1 0.458853625438369 1 0.411425173282623 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85839335 chr16:85839345 nonsynonymous SNV 0.645 1 31 hm5C_associated_SNPs_17990 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:85839301-85839346
64251 chr16 85839345 85839345 1 + G A CESC 85839336 + 85839316 85839356 41 ATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTCA ATGGCTGTCCTCTCTGCCCCCAGTGTATCACATTAAGTTCA < 41bp 1 0.479599193348123 1 0.782682061195374 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85839336 chr16:85839345 nonsynonymous SNV 0.645 1 30 hm5C_associated_SNPs_17991 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:85839301-85839346
64251 chrX 73043745 73043745 1 - C T CESC 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTCAGAACTACATGCCCTAGGATATAAAAATGATGTT < 41bp 1 0.307345318881287 1 0.382901281118393 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043745 . . 0 8 hm5C_associated_SNPs_17993 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043745 73043745 1 - C T CESC 73043738 - 73043718 73043758 41 TTCTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT TTCTGTGGGGCTCAGAACTACATGCCCTAGGATATAAAAAT < 41bp 1 0.0430707912083503 1 0.159604221582413 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043738 chrX:73043745 . . 0 14 hm5C_associated_SNPs_17994 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043745 73043745 1 - C T CESC 73043746 - 73043726 73043766 41 TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGGAT TGATTACTTTCTGTGGGGCTCAGAACTACATGCCCTAGGAT < 41bp 1 0.258361971615372 1 0.708385229110718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043746 chrX:73043745 . . 0 22 hm5C_associated_SNPs_17995 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043745 73043745 1 - C T CESC 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG GGTGATTACTTTCTGTGGGGCTCAGAACTACATGCCCTAGG < 41bp 1 0.125916924071082 1 0.10692685842514 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043745 . . 0 24 hm5C_associated_SNPs_17996 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr11 70253459 70253459 1 + C T CESC 70253474 + 70253454 70253494 41 GGGGGCCGATGACTGGGAGACCGACCCTGATTTTGTGGTAG GGGGGTCGATGACTGGGAGACCGACCCTGATTTTGTGGTAG < 41bp 1 0.152758183534367 1 0.222904741764069 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70253474 chr11:70253459 nonsynonymous SNV 0.102 1 6 hm5C_associated_SNPs_18000 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:70253440-70253460
64251 chrX 73046888 73046888 1 - C T CESC 73046871 - 73046851 73046891 41 GAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAA GAGAACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAA < 41bp 1 0.0968457527866874 1 0.107791572809219 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046871 chrX:73046888 . . 0 4 hm5C_associated_SNPs_18001 0 0 104 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046867-73046897
64251 chrX 73046888 73046888 1 - C T CESC 73046873 - 73046853 73046893 41 CCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAG CCGAGAACTAAGATGGAAAGCCCATGTTCCAAGATAGATAG < 41bp 1 0.151311326102016 1 0.0525023341178894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046873 chrX:73046888 . . 0 6 hm5C_associated_SNPs_18002 0 0 104 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046867-73046897
64251 chrX 73046888 73046888 1 - C T CESC 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC GATGGTTTGAGACTTGAGACCCGAGAACTAAGATGGAAAGC < 41bp 1 0.162712839356461 1 0.315807908773422 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046888 . . 0 26 hm5C_associated_SNPs_18003 0 0 104 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046867-73046897
64251 chrX 73046888 73046888 1 - C T CESC 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG AGATGGTTTGAGACTTGAGACCCGAGAACTAAGATGGAAAG < 41bp 1 0.444008960293405 1 0.0873652100563049 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046888 . . 0 27 hm5C_associated_SNPs_18004 0 0 104 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046867-73046897
64251 chrX 103434381 103434381 1 + G A CESC 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTGGACTCTTCCTTAACGAAGAGGTG < 41bp 1 0.297029303916124 1 0.0946494936943054 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434381 synonymous SNV . 0 20 hm5C_associated_SNPs_18005 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:103434363-103434389
64251 chr14 105927198 105927198 1 + G A CESC 105927186 + 105927166 105927206 41 TGCCGCAGGGCGGGCCCGTGCTCTGCAGGGACGAGATGGAG TGCCGCAGGGCGGGCCCGTGCTCTGCAGGGACAAGATGGAG < 41bp 1 0.461235431947589 1 0.271026611328125 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927186 chr14:105927198 nonsynonymous SNV 0.991 4 33 hm5C_associated_SNPs_18006 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105927174-105927198
64251 chr12 56552278 56552278 1 + G A CESC 56552289 + 56552269 56552309 41 GGGTAGGAGGCAAAGGGAATCTGAGGACCCGAAAGGTTGGA GGGTAGGAGACAAAGGGAATCTGAGGACCCGAAAGGTTGGA < 41bp 1 0.760541391738845 1 0.495311200618744 experiment 0.478917216522311 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYL6 ENSG00000092841 CDS Human protein_coding chr12:56552289 chr12:56552278 synonymous SNV . 0 10 hm5C_associated_SNPs_18007 0 0 22 BUD13 POSTAR2 ENCODE chr12:56552242-56552337
64251 chr3 184042681 184042681 1 + C T CESC 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAGGAACGAGGATGCCTGAAGGAAGAG < 41bp 1 0.660753613191552 1 0.474718689918518 experiment 0.678492773616896 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042681 nonsynonymous SNV 0.978 4 27 hm5C_associated_SNPs_18009 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr5 150027752 150027752 1 + G A CESC 150027743 + 150027723 150027763 41 AAGCCTCCCAGGCCATGCACCGGGGCTCAGCCTGAGTTCCA AAGCCTCCCAGGCCATGCACCGGGGCTCAACCTGAGTTCCA < 41bp 1 0.764543156506991 1 0.958402276039124 experiment 0.470913686986019 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYNPO ENSG00000171992 CDS Human protein_coding chr5:150027743 chr5:150027752 nonsynonymous SNV 0.007 0 30 hm5C_associated_SNPs_18010 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:150027752-150027779
64251 chr4 77661622 77661622 1 + G A CESC 77661608 + 77661588 77661628 41 CAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGG CAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCACCTCGG < 41bp 1 0.24222558347654 1 0.547165870666504 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661608 chr4:77661622 nonsynonymous SNV 0.002 0 35 hm5C_associated_SNPs_18013 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661622 77661622 1 + G A CESC 77661609 + 77661589 77661629 41 AGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGC AGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCACCTCGGC < 41bp 1 0.482409447020666 1 0.575695395469666 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661609 chr4:77661622 nonsynonymous SNV 0.002 0 34 hm5C_associated_SNPs_18014 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661622 77661622 1 + G A CESC 77661612 + 77661592 77661632 41 CTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCT CTGGGCCGGAGGGGGCCCGGCCCAGGCAGCACCTCGGCTCT < 41bp 1 0.32843385159513 1 0.311260879039764 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661612 chr4:77661622 nonsynonymous SNV 0.002 0 31 hm5C_associated_SNPs_18015 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661622 77661622 1 + G A CESC 77661613 + 77661593 77661633 41 TGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTT TGGGCCGGAGGGGGCCCGGCCCAGGCAGCACCTCGGCTCTT < 41bp 1 0.407041908061756 1 0.333534240722656 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661613 chr4:77661622 nonsynonymous SNV 0.002 0 30 hm5C_associated_SNPs_18016 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr4 77661622 77661622 1 + G A CESC 77661614 + 77661594 77661634 41 GGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTC GGGCCGGAGGGGGCCCGGCCCAGGCAGCACCTCGGCTCTTC < 41bp 1 0.68269815533052 1 0.497785121202469 experiment 0.634603689338961 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661614 chr4:77661622 nonsynonymous SNV 0.002 0 29 hm5C_associated_SNPs_18017 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661620-77661640
64251 chr19 17313014 17313014 1 + C T CESC 17313031 + 17313011 17313051 41 GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT GAGTGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT < 41bp 1 0.150402262951755 1 0.0667835175991058 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17313031 chr19:17313014 nonsynonymous SNV 0.001 3 4 hm5C_associated_SNPs_18018 0 0 1 PPIG POSTAR2 ENCODE chr19:17312968-17313016
64251 chr7 77539627 77539627 1 + A G CESC 77539642 + 77539622 77539662 41 AGATAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA AGATAGCACACAAGAGGGAGCAGTTCAGAACCACGGTACAA < 41bp 1 0.252283937772403 1 0.171985298395157 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77539642 chr7:77539627 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_18019 0 0 2 BUD13 POSTAR2 ENCODE chr7:77539538-77539662
64251 chr2 182766569 182766569 1 + G A CESC 182766571 + 182766551 182766591 41 TTCTCAAGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTA TTCTCAAGTCTCCGGGACACCCCTGCAGAGAATTGGAAGTA < 41bp 1 0.293017152555715 1 0.0407386422157288 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182766571 chr2:182766569 synonymous SNV . 0 19 hm5C_associated_SNPs_18023 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:182766555-182766589
64251 chrX 100668146 100668146 1 + C T CESC 100668159 + 100668139 100668179 41 GTGGTGGCGCTTATGGTAGCCAAATGATGGGAGGGATGGGC GTGGTGGTGCTTATGGTAGCCAAATGATGGGAGGGATGGGC < 41bp 1 0.57037758828562 1 0.825967073440552 experiment 0.859244823428759 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668159 chrX:100668146 synonymous SNV . 0 8 hm5C_associated_SNPs_18024 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:100668059-100668154
64251 chr5 169018126 169018126 1 + C T CESC 169018123 + 169018103 169018143 41 CGAATGTTAGAAAGTTTGAGCTGCGAATGTGAAGCTATTAA CGAATGTTAGAAAGTTTGAGCTGTGAATGTGAAGCTATTAA < 41bp 1 0.22241701004605 1 0.11500209569931 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018123 chr5:169018126 synonymous SNV . 0 24 hm5C_associated_SNPs_18026 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:169018099-169018127
64251 chr11 65402802 65402802 1 + C T CESC 65402789 + 65402769 65402809 41 CATCTCACATGAGGGTGACCCAGCATGGCGCAGCGCCATCC CATCTCACATGAGGGTGACCCAGCATGGCGCAGTGCCATCC < 41bp 1 0.697778186516304 1 0.71066677570343 experiment 0.604443626967392 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402789 chr11:65402802 synonymous SNV . 0 34 hm5C_associated_SNPs_18028 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402802 65402802 1 + C T CESC 65402797 + 65402777 65402817 41 ATGAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAAC ATGAGGGTGACCCAGCATGGCGCAGTGCCATCCTCAGCAAC < 41bp 1 0.345816238529472 1 0.104507565498352 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402797 chr11:65402802 synonymous SNV . 0 26 hm5C_associated_SNPs_18029 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402802 65402802 1 + C T CESC 65402799 + 65402779 65402819 41 GAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACAC GAGGGTGACCCAGCATGGCGCAGTGCCATCCTCAGCAACAC < 41bp 1 0.168365165530345 1 0.0898236334323883 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402799 chr11:65402802 synonymous SNV . 0 24 hm5C_associated_SNPs_18030 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402802 65402802 1 + C T CESC 65402804 + 65402784 65402824 41 TGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCT TGACCCAGCATGGCGCAGTGCCATCCTCAGCAACACGCCCT < 41bp 1 0.0154432818862815 1 0.0348155200481415 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402804 chr11:65402802 synonymous SNV . 0 19 hm5C_associated_SNPs_18031 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402802 65402802 1 + C T CESC 65402805 + 65402785 65402825 41 GACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCTC GACCCAGCATGGCGCAGTGCCATCCTCAGCAACACGCCCTC < 41bp 1 0.0795344090888868 1 0.0678569972515106 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402805 chr11:65402802 synonymous SNV . 0 18 hm5C_associated_SNPs_18032 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chrX 11781090 11781090 1 + C T CESC 11781084 + 11781064 11781104 41 CACGTTATGCCACATGCCAACATGAACGTGCATTATATCCC CACGTTATGCCACATGCCAACATGAATGTGCATTATATCCC < 41bp 1 0.620027441269826 1 0.0683413445949554 experiment 0.759945117460347 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSL3 ENSG00000005302 CDS Human protein_coding chrX:11781084 chrX:11781090 synonymous SNV . 0 27 hm5C_associated_SNPs_18033 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:11781087-11781109
64251 chr11 763814 763814 1 + C T CESC 763823 + 763803 763843 41 ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAA ATTGTCATGGGTGCCTCCTTCCGCAACACGGGCGAGATCAA < 41bp 1 0.744774235404108 1 0.857121706008911 experiment 0.510451529191784 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:763823 chr11:763814 synonymous SNV . 0 12 hm5C_associated_SNPs_18034 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:763796-763828
64251 chr17 37360380 37360380 1 + G A CESC 37360369 + 37360349 37360389 41 AAGGTGAAGGGGAATGTGTTCAAAAACAAGCGGATTCTCAT AAGGTGAAGGGGAATGTGTTCAAAAACAAGCAGATTCTCAT < 41bp 1 0.635778001595054 1 0.581879675388336 experiment 0.728443996809892 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360369 chr17:37360380 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_18037 0 0 33 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360340-37360380
64251 chr14 61346446 61346446 1 + A G CESC 61346465 + 61346445 61346485 41 CACTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA CGCTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA < 41bp 1 0.644521803872707 1 0.671913802623749 experiment 0.710956392254586 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346465 chr14:61346446 synonymous SNV . 0 2 hm5C_associated_SNPs_18039 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:61346433-61346464
64251 chr3 170110061 170110061 1 + G T CESC 170110073 + 170110053 170110093 41 GAACTGAGGCAGAGATTGGACCATGCTGAGGCCGATAGGCA GAACTGAGTCAGAGATTGGACCATGCTGAGGCCGATAGGCA < 41bp 1 0.164894561357456 1 0.101405888795853 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110073 chr3:170110061 nonsynonymous SNV 0.929 5 9 hm5C_associated_SNPs_18040 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr12 58001381 58001381 1 + G A CESC 58001367 + 58001347 58001387 41 AGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGT AGTACGGCACCATTGTCATCCAGTACGTCTTCCCACCCGGT < 41bp 1 0.453986516081927 1 0.358204334974289 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001367 chr12:58001381 synonymous SNV . 0 35 hm5C_associated_SNPs_18041 0 0 1 GRWD1 POSTAR2 ENCODE chr12:58001354-58001396
64251 chr15 78841246 78841246 1 + G A CESC 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCATGAGAAGAAAGAAAAAGAA < 41bp 1 0.630047266286163 1 0.376025229692459 experiment 0.739905467427673 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841246 nonsynonymous SNV 0.989 0 22 hm5C_associated_SNPs_18042 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr15 64410320 64410320 1 + C T CESC 64410330 + 64410310 64410350 41 TTTTAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAA TTTTAGATGCTACAGTGGAGCTATCCTTGGACAGCACACAA < 41bp 1 0.0616734528495752 1 0.120413303375244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410330 chr15:64410320 synonymous SNV . 0 11 hm5C_associated_SNPs_18043 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221657 chr15:64410300-64410320
64251 chr15 64410320 64410320 1 + C T CESC 64410334 + 64410314 64410354 41 AGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATA AGATGCTACAGTGGAGCTATCCTTGGACAGCACACAAAATA < 41bp 1 0.044524109723002 1 0.109552294015884 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410334 chr15:64410320 synonymous SNV . 0 7 hm5C_associated_SNPs_18044 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221657 chr15:64410300-64410320
64251 chr15 75499531 75499531 1 + C T CESC 75499548 + 75499528 75499568 41 ATGCCCGGGATGACCTCTCTCTCTATGGAGCATCCCCTGGG ATGTCCGGGATGACCTCTCTCTCTATGGAGCATCCCCTGGG < 41bp 1 0.693048604218994 1 0.899000644683838 experiment 0.613902791562013 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75499548 chr15:75499531 nonsynonymous SNV 0.768 2 4 hm5C_associated_SNPs_18045 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:75499519-75499539
64251 chr2 28521316 28521316 1 + A G CESC 28521298 + 28521278 28521318 41 TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCCGTACA TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCCGTGCA < 41bp 1 0.228533077084133 1 0.155998289585114 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521298 chr2:28521316 nonsynonymous SNV 0.986 4 39 hm5C_associated_SNPs_18048 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:28521297-28521319
64251 chr10 81036971 81036971 1 + G A CESC 81036966 + 81036946 81036986 41 TCCTCCTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCG TCCTCCTGGTGCGAAGAGCTCGGCCACCTGCTGCTGCTCCG < 41bp 1 0.450375257335588 1 0.316440463066101 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81036966 chr10:81036971 nonsynonymous SNV 0.998 3 26 hm5C_associated_SNPs_18049 0 0 3 DDX24 POSTAR2 ENCODE chr10:81036937-81037031
64251 chr6 34730472 34730472 1 + A G CESC 34730453 + 34730433 34730473 41 ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGAC ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGGC < 41bp 1 0.605285429427804 1 0.771468162536621 experiment 0.789429141144391 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNRPC ENSG00000124562 CDS Human protein_coding chr6:34730453 chr6:34730472 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_18055 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34730437-34730473
64251 chr7 44805112 44805112 1 + G A CESC 44805096 + 44805076 44805116 41 CCCAGCGTGATGGAGATGATCGCCGCCCTGGGCCCCGGCGC CCCAGCGTGATGGAGATGATCGCCGCCCTGGGCCCCAGCGC < 41bp 1 0.790843732938293 1 0.353436470031738 experiment 0.418312534123414 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805096 chr7:44805112 nonsynonymous SNV 0.618 0 37 hm5C_associated_SNPs_18056 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:44805093-44805127
64251 chr1 39853293 39853293 1 + T G CESC 39853302 + 39853282 39853322 41 AAGCTAAGATGTCTGAGTTGCGAGTCACTCTGGATCCAGTG AAGCTAAGATGGCTGAGTTGCGAGTCACTCTGGATCCAGTG < 41bp 1 0.154504767138226 1 0.527155995368958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39853302 chr1:39853293 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_18058 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39853245-39853294
64251 chr1 117631444 117631444 1 + C T CESC 117631430 + 117631410 117631450 41 GTGATTCTTCCAGGGCACCTCAACACCTTTGCTTCGAATAG GTGATTCTTCCAGGGCACCTCAACACCTTTGCTTTGAATAG < 41bp 1 0.557899835007005 1 0.419727385044098 experiment 0.88420032998599 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117631430 chr1:117631444 stopgain 0.987 0 35 hm5C_associated_SNPs_18060 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117631429-117631455
64251 chrX 73046072 73046072 1 - C A CESC 73046069 - 73046049 73046089 41 GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATGTGAAGA GGAAAAAAAAGTGCCAGTCTCTCTAGAGAAAAATGTGAAGA < 41bp 1 0.345014594886721 1 0.905385673046112 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046069 chrX:73046072 . . 0 18 hm5C_associated_SNPs_18063 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046072 73046072 1 - C A CESC 73046075 - 73046055 73046095 41 TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATG TGTTGGGGAAAAAAAAGTGCCAGTCTCTCTAGAGAAAAATG < 41bp 1 0.0665782381892902 1 0.0737722814083099 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046075 chrX:73046072 . . 0 24 hm5C_associated_SNPs_18064 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046072 73046072 1 - C A CESC 73046076 - 73046056 73046096 41 TTGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAAT TTGTTGGGGAAAAAAAAGTGCCAGTCTCTCTAGAGAAAAAT < 41bp 1 0.0616509729323631 1 0.0856037437915802 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046076 chrX:73046072 . . 0 25 hm5C_associated_SNPs_18065 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr20 34832792 34832792 1 + G A CESC 34832788 + 34832768 34832808 41 TACCACCAGCTTGGTGAGATCCCCGCTGACTTCTTCGTAGA TACCACCAGCTTGGTGAGATCCCCACTGACTTCTTCGTAGA < 41bp 1 0.582049360692064 1 0.665118217468262 experiment 0.835901278615872 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AAR2 ENSG00000131043 CDS Human protein_coding chr20:34832788 chr20:34832792 nonsynonymous SNV 0.871 1 25 hm5C_associated_SNPs_18066 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34832725-34832794
64251 chr12 19427794 19427794 1 + G A CESC 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CAGATCTTAGAGGTGGAAATCACCCCAATACAGGGCCCTTA < 41bp 1 0.38000898257437 1 0.122583597898483 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427794 nonsynonymous SNV 0.866 0 22 hm5C_associated_SNPs_18067 0 0 1 BUD13 POSTAR2 ENCODE chr12:19427768-19427916
64251 chr12 6646123 6646123 1 + G A CESC 6646142 + 6646122 6646162 41 CGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCA CACTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCA < 41bp 1 0.42345960148757 1 0.107230812311172 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646142 chr12:6646123 nonsynonymous SNV 0.524 1 2 hm5C_associated_SNPs_18068 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6646120-6646140
64251 chr14 39650860 39650860 1 + C T CESC 39650849 + 39650829 39650869 41 GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGG GACATAATAGAGATAGAAAGCACAGAAGGAGTGTGGATCGG < 41bp 1 0.750407661741271 1 0.154248356819153 experiment 0.499184676517458 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650849 chr14:39650860 synonymous SNV . 0 32 hm5C_associated_SNPs_18069 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr2 63834106 63834106 1 + T C CESC 63834096 + 63834076 63834116 41 GACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTCCTCTG GACAGAAGAAAAAGAAAGTGCTTTTGAATTCCTTTCCTCTG < 41bp 1 0.0845232898881563 1 0.0530009269714355 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834096 chr2:63834106 synonymous SNV . 0 31 hm5C_associated_SNPs_18070 0 0 22 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:63834084-63834126
64251 chr3 47030600 47030600 1 + C T CESC 47030605 + 47030585 47030625 41 AACATAGAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGT AACATAGAGGCAGGCTGGGGCCAAGTGCTAGTGCCCCGAGT < 41bp 1 0.0975176619884628 1 0.659772992134094 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030605 chr3:47030600 nonsynonymous SNV 0.307 0 16 hm5C_associated_SNPs_18072 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr3 47030600 47030600 1 + C T CESC 47030606 + 47030586 47030626 41 ACATAGAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGTG ACATAGAGGCAGGCTGGGGCCAAGTGCTAGTGCCCCGAGTG < 41bp 1 0.405879126943395 1 0.61117684841156 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030606 chr3:47030600 nonsynonymous SNV 0.307 0 15 hm5C_associated_SNPs_18073 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr3 47030600 47030600 1 + C T CESC 47030618 + 47030598 47030638 41 GCCGGGGCCAAGTGCTAGTGCCCCGAGTGCTGGCACTGTTG GCTGGGGCCAAGTGCTAGTGCCCCGAGTGCTGGCACTGTTG < 41bp 1 0.177611245416619 1 0.0404212474822998 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030618 chr3:47030600 nonsynonymous SNV 0.307 0 3 hm5C_associated_SNPs_18074 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr3 47030600 47030600 1 + C T CESC 47030619 + 47030599 47030639 41 CCGGGGCCAAGTGCTAGTGCCCCGAGTGCTGGCACTGTTGA CTGGGGCCAAGTGCTAGTGCCCCGAGTGCTGGCACTGTTGA < 41bp 1 0.336232411512908 1 0.582248210906982 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030619 chr3:47030600 nonsynonymous SNV 0.307 0 2 hm5C_associated_SNPs_18075 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr16 706391 706391 1 + G A CESC 706388 + 706368 706408 41 CCTCGGGCCACCTGGGCTTCCTGGACACGCTGTCCCGGGTG CCTCGGGCCACCTGGGCTTCCTGAACACGCTGTCCCGGGTG < 41bp 1 0.713304112654366 1 0.541586339473724 experiment 0.573391774691268 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:706388 chr16:706391 nonsynonymous SNV 0.877 3 24 hm5C_associated_SNPs_18076 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:706370-706391
64251 chr14 24909613 24909613 1 - G A CESC 24909627 - 24909607 24909647 41 TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAA TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGTCACCAA < 41bp 1 0.32303472137672 1 0.155137091875076 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909627 chr14:24909613 synonymous SNV . 0 35 hm5C_associated_SNPs_18077 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr9 133738155 133738155 1 + C T CESC 133738171 + 133738151 133738191 41 TCTACGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG TCTATGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG < 41bp 1 0.113819384188026 1 0.123953431844711 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738171 chr9:133738155 synonymous SNV . 0 5 hm5C_associated_SNPs_18078 0 0 3 PRPF8 POSTAR2 ENCODE chr9:133738123-133738177
64251 chr7 128407652 128407652 1 + C T CESC 128407640 + 128407620 128407660 41 GAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCA GAAGAGACCAAAGACTGGATCCTTCCCTCAGATTATGATCA < 41bp 1 0.0213300574455008 1 0.0525286793708801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407640 chr7:128407652 synonymous SNV . 0 33 hm5C_associated_SNPs_18079 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr7 128407652 128407652 1 + C T CESC 128407641 + 128407621 128407661 41 AAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCAT AAGAGACCAAAGACTGGATCCTTCCCTCAGATTATGATCAT < 41bp 1 0.173930904862816 1 0.0527183711528778 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407641 chr7:128407652 synonymous SNV . 0 32 hm5C_associated_SNPs_18080 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr7 128407652 128407652 1 + C T CESC 128407644 + 128407624 128407664 41 AGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCA AGACCAAAGACTGGATCCTTCCCTCAGATTATGATCATGCA < 41bp 1 0.116738893405352 1 0.167196929454803 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407644 chr7:128407652 synonymous SNV . 0 29 hm5C_associated_SNPs_18081 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr17 7479881 7479881 1 + G A CESC 7479886 + 7479866 7479906 41 GGAGACTACATGGGCGCCTCCTGTCACGCCTGTATCGGGGG GGAGACTACATGGGCACCTCCTGTCACGCCTGTATCGGGGG < 41bp 1 0.175582607870134 1 0.392135471105576 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479886 chr17:7479881 nonsynonymous SNV 0.940 3 16 hm5C_associated_SNPs_18083 0 0 39 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479881 7479881 1 + G A CESC 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCACCTCCTGTCACGCCTGTATCGGGGGCACCAA < 41bp 1 0.626410477588498 1 0.0668170750141144 experiment 0.747179044823003 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479881 nonsynonymous SNV 0.940 3 10 hm5C_associated_SNPs_18084 0 0 39 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479881 7479881 1 + G A CESC 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCACCTCCTGTCACGCCTGTATCGGGGGCACCAACGT < 41bp 1 0.573837057883373 1 0.178649514913559 experiment 0.852325884233255 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479881 nonsynonymous SNV 0.940 3 7 hm5C_associated_SNPs_18085 0 0 39 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr2 236817467 236817467 1 + C T CESC 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCATGTCAGCCT < 41bp 1 0.114743717161596 1 0.0508439838886261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817467 nonsynonymous SNV 0.915 3 33 hm5C_associated_SNPs_18086 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:236817467-236817468
64251 chr16 85682307 85682307 1 + A G CESC 85682293 + 85682273 85682313 41 CCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATCGCTC CCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCGTCGCTC < 41bp 1 0.180787762800469 1 0.064752608537674 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85682293 chr16:85682307 nonsynonymous SNV 0.991 4 35 hm5C_associated_SNPs_18087 0 0 3 METAP2 POSTAR2 ENCODE chr16:85682250-85682344
64251 chr7 148921506 148921506 1 + C T CESC 148921487 + 148921467 148921507 41 ACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCT ACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGTT < 41bp 1 0.0733133621291729 1 0.0951167941093445 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921487 chr7:148921506 synonymous SNV . 0 40 hm5C_associated_SNPs_18090 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921506 148921506 1 + C T CESC 148921488 + 148921468 148921508 41 CCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCTG CCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGTTG < 41bp 1 0.725226678890968 1 0.609257519245148 experiment 0.549546642218063 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921488 chr7:148921506 synonymous SNV . 0 39 hm5C_associated_SNPs_18091 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921506 148921506 1 + C T CESC 148921521 + 148921501 148921541 41 AGCGGCTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTG AGCGGTTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTG < 41bp 1 0.471125649001573 1 0.768805503845215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921521 chr7:148921506 synonymous SNV . 0 6 hm5C_associated_SNPs_18092 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr2 27455051 27455051 1 + T C CESC 27455031 + 27455011 27455051 41 GACAGCCTTTGCCGCCAGACCTGCTGCAACAGGCCAAGTGT GACAGCCTTTGCCGCCAGACCTGCTGCAACAGGCCAAGTGC < 41bp 1 0.338115742558274 1 0.518935322761536 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455031 chr2:27455051 synonymous SNV . 0 41 hm5C_associated_SNPs_18094 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:27455040-27455080
64251 chr2 24964690 24964690 1 + G A CESC 24964700 + 24964680 24964720 41 CAACGTCAGCGGGAACTGTACAGTCAACAGCACCGACAGAG CAACGTCAGCAGGAACTGTACAGTCAACAGCACCGACAGAG < 41bp 1 0.277732118897152 1 0.426071316003799 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964700 chr2:24964690 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_18095 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:24964681-24964718
64251 chr17 79668134 79668134 1 + C T CESC 79668148 + 79668128 79668168 41 CTACATCGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC CTACATTGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC < 41bp 1 0.196277855656487 1 0.390263795852661 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79668148 chr17:79668134 synonymous SNV . 0 7 hm5C_associated_SNPs_18096 0 0 3 DDX24 POSTAR2 ENCODE chr17:79668104-79668161
64251 chr12 52635363 52635363 1 + G T CESC 52635378 + 52635358 52635398 41 GCGCAGTATGAGGAGATGGCCAAATGCAGCCGGGCTGAGGC GCGCATTATGAGGAGATGGCCAAATGCAGCCGGGCTGAGGC < 41bp 1 0.362399618865997 1 0.629744529724121 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52635378 chr12:52635363 nonsynonymous SNV 0.824 3 6 hm5C_associated_SNPs_18097 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52635360-52635380
64251 chr9 91077535 91077535 1 + G A CESC 91077534 + 91077514 91077554 41 GTTACCCAGTGGAAAGGAACCGTTCTGGACCAGGTGCCTGT GTTACCCAGTGGAAAGGAACCATTCTGGACCAGGTGCCTGT < 41bp 1 0.152382717426967 1 0.0625759363174438 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077534 chr9:91077535 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_18102 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91077504-91077614
64251 chr9 91077535 91077535 1 + G A CESC 91077544 + 91077524 91077564 41 GGAAAGGAACCGTTCTGGACCAGGTGCCTGTAAATCCTTCT GGAAAGGAACCATTCTGGACCAGGTGCCTGTAAATCCTTCT < 41bp 1 0.447791101370821 1 0.39392364025116 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077544 chr9:91077535 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_18103 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91077504-91077614
64251 chrX 153695759 153695759 1 + C T CESC 153695748 + 153695728 153695768 41 TTTACCTACTACCCTGATCCCAGCTTTGAGCCGCTGGGGCC TTTACCTACTACCCTGATCCCAGCTTTGAGCTGCTGGGGCC < 41bp 1 0.417542099464905 1 0.509492456912994 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153695748 chrX:153695759 nonsynonymous SNV 0.891 1 32 hm5C_associated_SNPs_18104 0 0 4 DDX24 POSTAR2 ENCODE chrX:153695745-153695789
64251 chr19 14674818 14674818 1 + C T CESC 14674819 + 14674799 14674839 41 CCTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCT CCTAACAGAGTACGCGGGGTCCCTTTTCATCTACCTGCTCT < 41bp 1 0.165185018623741 1 0.0314308106899261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674819 chr19:14674818 nonsynonymous SNV 0.985 2 20 hm5C_associated_SNPs_18106 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:14674800-14674820
64251 chr19 14674818 14674818 1 + C T CESC 14674820 + 14674800 14674840 41 CTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCTT CTAACAGAGTACGCGGGGTCCCTTTTCATCTACCTGCTCTT < 41bp 1 0.0353187164582597 1 0.0139857530593872 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674820 chr19:14674818 nonsynonymous SNV 0.985 2 19 hm5C_associated_SNPs_18107 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:14674800-14674820
64251 chr15 69714744 69714744 1 + C T CESC 69714749 + 69714729 69714769 41 GTCAGAAAAGAGAAGCTATGCCCAATCCAAAGACTTCTTCT GTCAGAAAAGAGAAGTTATGCCCAATCCAAAGACTTCTTCT < 41bp 1 0.487482173269615 1 0.0493801832199097 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69714749 chr15:69714744 nonsynonymous SNV 0.985 0 16 hm5C_associated_SNPs_18108 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:69714691-69714751
64251 chr14 105936295 105936295 1 + G A CESC 105936285 + 105936265 105936305 41 CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT CGGCGGCGGATGAACTGGATCGACGCCCCGAATGACGTGTT < 41bp 1 0.563651921034756 1 0.681366324424744 experiment 0.872696157930488 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936285 chr14:105936295 nonsynonymous SNV 0.934 0 31 hm5C_associated_SNPs_18109 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:105936276-105936298
64251 chr14 105936295 105936295 1 + G A CESC 105936315 + 105936295 105936335 41 GATGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGG AATGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGG < 41bp 1 0.534526544067363 1 0.685532450675964 experiment 0.930946911865274 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936315 chr14:105936295 nonsynonymous SNV 0.934 0 1 hm5C_associated_SNPs_18110 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:105936276-105936298
64251 chr19 41307130 41307130 1 + G A CESC 41307114 + 41307094 41307134 41 TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTGGGCGCCTG TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTGGGCACCTG < 41bp 1 0.778213188850181 1 0.848234415054321 experiment 0.443573622299638 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41307114 chr19:41307130 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_18111 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:41307117-41307154
64251 chr14 24779938 24779938 1 + G A CESC 24779945 + 24779925 24779965 41 TCGCGGGCCACAGGCACAGCCTTCCTGCTGCTGGCGGCGCT TCGCGGGCCACAGACACAGCCTTCCTGCTGCTGGCGGCGCT < 41bp 1 0.145585758575868 1 0.172274529933929 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LTB4R2 ENSG00000213906;ENSG00000272658 CDS Human other chr14:24779945 chr14:24779938 nonsynonymous SNV 0.913 3 14 hm5C_associated_SNPs_18112 0 0 1 PPIG POSTAR2 ENCODE chr14:24779930-24779994
64251 chr9 138395642 138395642 1 + C T CESC 138395653 + 138395633 138395673 41 TCTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTC TCTTTGGCCTCACGGTCCGCCTGCCGGACCTCATCATCTTC < 41bp 1 0.45642471720927 1 0.138496071100235 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395653 chr9:138395642 nonsynonymous SNV 0.008 1 10 hm5C_associated_SNPs_18114 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr11 126143249 126143249 1 + G A CESC 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAGTCAATGCTCCTCCCCTGGACCTCCGGTTCA < 41bp 1 0.452828859777537 1 0.0818069577217102 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143249 nonsynonymous SNV 0.004 0 14 hm5C_associated_SNPs_18117 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr11:126143244-126143268
64251 chr15 69737222 69737222 1 + G A CESC 69737220 + 69737200 69737240 41 CAGATGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTG CAGATGGGTAGATCATAAGCCCACCTCTAACATGCAAACTG < 41bp 1 0.132096176873894 1 0.0333828330039978 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737220 chr15:69737222 nonsynonymous SNV 0.983 0 23 hm5C_associated_SNPs_18120 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:69737202-69737222
64251 chr15 69737222 69737222 1 + G A CESC 69737224 + 69737204 69737244 41 TGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTGAAAC TGGGTAGATCATAAGCCCACCTCTAACATGCAAACTGAAAC < 41bp 1 0.302685051131552 1 0.332107245922089 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737224 chr15:69737222 nonsynonymous SNV 0.983 0 19 hm5C_associated_SNPs_18121 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:69737202-69737222
64251 chr1 6681476 6681476 1 + G A CESC 6681488 + 6681468 6681508 41 CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTGCATG CAGATGACAATTCCTGGGACCTCGTGACCTGCTTCTGCATG < 41bp 1 0.336427873450511 1 0.0231766104698181 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681488 chr1:6681476 nonsynonymous SNV 0.996 3 9 hm5C_associated_SNPs_18122 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr1:6681460-6681480
64251 chr19 42729207 42729207 1 + A G CESC 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA GAGTTCTTGGAGCATCAGGGCGCCCACTTTGACTCCCTAGA < 41bp 1 0.140766875591602 1 0.0885734856128693 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729207 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_18124 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:42729188-42729216
64251 chr19 49469847 49469847 1 + A G CESC 49469831 + 49469811 49469851 41 GTTTCTAATTTCTCCCTCTTCTCTCTCAGCTCTGTGACTTC GTTTCTAATTTCTCCCTCTTCTCTCTCAGCTCTGTGGCTTC < 41bp 1 0.301485068031866 1 0.227178931236267 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469831 chr19:49469847 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_18129 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49469820-49469858
64251 chr1 110134776 110134776 1 + C T CESC 110134762 + 110134742 110134782 41 GAGATCTATACTCACTTCACCTGTGCCACAGACACGAAGAA GAGATCTATACTCACTTCACCTGTGCCACAGACATGAAGAA < 41bp 1 0.181072842175589 1 0.271376490592957 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110134762 chr1:110134776 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18130 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110134694-110134787
64251 chr2 47221590 47221590 1 + G A CESC 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC CATGGACAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC < 41bp 1 0.0806636242473411 1 0.0190828442573547 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221590 nonsynonymous SNV 0.998 0 6 hm5C_associated_SNPs_18131 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chr2 75882227 75882227 1 + G A CESC 75882235 + 75882215 75882255 41 CCTGGTCTAAACGCTGGGAACGTCCAAATTTTAATATTAAA CCTGGTCTAAACACTGGGAACGTCCAAATTTTAATATTAAA < 41bp 1 0.0590618203494225 1 0.115106344223022 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL19 ENSG00000115364 CDS Human protein_coding chr2:75882235 chr2:75882227 nonsynonymous SNV 0.993 4 13 hm5C_associated_SNPs_18132 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:75882220-75882240
64251 chrX 107911640 107911640 1 + T C CESC 107911644 + 107911624 107911664 41 TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCT TTCACGGTTTCCCTGGCGTGCAGGGTCCCCCAGGCCCTCCT < 41bp 1 0.779826403390355 1 0.811754703521729 experiment 0.44034719321929 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107911644 chrX:107911640 synonymous SNV . 0 17 hm5C_associated_SNPs_18133 0 0 4 U2AF2 POSTAR2 GSE83923,CSM2221661 chrX:107911639-107911640
64251 chr4 160264479 160264479 1 + G T CESC 160264487 + 160264467 160264507 41 TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTG TGAGAAGCTAAGTATGATTGCAAAAGAAATTCGTCACGTTG < 41bp 1 0.567339223524324 1 0.274310290813446 experiment 0.865321552951351 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160264487 chr4:160264479 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_18135 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:160264475-160264513
64251 chr11 93412684 93412684 1 + G A CESC 93412674 + 93412654 93412694 41 TGGAACGGTTTGAAAAGGCACATGTACGGGGATTCCAAGCA TGGAACGGTTTGAAAAGGCACATGTACGGGAATTCCAAGCA < 41bp 1 0.220301559685363 1 0.0777067840099335 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP295 ENSG00000166004 CDS Human protein_coding chr11:93412674 chr11:93412684 nonsynonymous SNV 0.868 4 31 hm5C_associated_SNPs_18136 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:93412666-93412687
64251 chr17 1640930 1640930 1 + G A CESC 1640921 + 1640901 1640941 41 CACCAGCCTGGCCTTGCTGCCCACTAAACGCCACCTCCTGC CACCAGCCTGGCCTTGCTGCCCACTAAACACCACCTCCTGC < 41bp 1 0.0745481059364232 1 0.0645775198936462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR81 ENSG00000167716 CDS Human protein_coding chr17:1640921 chr17:1640930 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_18141 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:1640926-1640951
64251 chr5 118861676 118861676 1 + G A CESC 118861674 + 118861654 118861694 41 TTTCTGCCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT TTTCTGCCAGGCGTGTGTTACAACAGTTTGCAGATAATGAT < 41bp 1 0.665499451328833 1 0.143329828977585 experiment 0.669001097342334 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118861674 chr5:118861676 synonymous SNV . 0 23 hm5C_associated_SNPs_18142 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118861639-118861687
64251 chr19 41135382 41135382 1 + G A CESC 41135396 + 41135376 41135416 41 CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC CCTTCCACTGCATCTGCCGCCCGGGATTCGCACCCACGCAC < 41bp 1 0.58263227163505 1 0.865509033203125 experiment 0.834735456729901 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135396 chr19:41135382 nonsynonymous SNV 0.982 2 7 hm5C_associated_SNPs_18144 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41135363-41135406
64251 chr16 30081525 30081525 1 + G A CESC 30081505 + 30081485 30081525 41 TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACA < 41bp 1 0.059388506920577 1 0.0350784957408905 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081505 chr16:30081525 nonsynonymous SNV 0.978 2 41 hm5C_associated_SNPs_18145 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081525 30081525 1 + G A CESC 30081506 + 30081486 30081526 41 GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACAC < 41bp 1 0.0595919202653478 1 0.0503954589366913 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081506 chr16:30081525 nonsynonymous SNV 0.978 2 40 hm5C_associated_SNPs_18146 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081525 30081525 1 + G A CESC 30081507 + 30081487 30081527 41 GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACACC < 41bp 1 0.178440886133824 1 0.0756585001945496 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081507 chr16:30081525 nonsynonymous SNV 0.978 2 39 hm5C_associated_SNPs_18147 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081525 30081525 1 + G A CESC 30081509 + 30081489 30081529 41 GCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCCTA GCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACACCTA < 41bp 1 0.433478674906766 1 0.192023694515228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081509 chr16:30081525 nonsynonymous SNV 0.978 2 37 hm5C_associated_SNPs_18148 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr7 133682272 133682272 1 + C T CESC 133682278 + 133682258 133682298 41 TCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTCAG TCAAGACAGCCACATGAACACGGATCTCCCCCCAGTGTCAG < 41bp 1 0.408394658097704 1 0.276822656393051 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682278 chr7:133682272 nonsynonymous SNV 0.031 0 15 hm5C_associated_SNPs_18149 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr16 27374348 27374348 1 + C A CESC 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCATCCAGCATGGGGCAGCTGCAGCC < 41bp 1 0.782436099833899 1 0.815603137016296 experiment 0.435127800332203 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374348 nonsynonymous SNV 0.391 3 18 hm5C_associated_SNPs_18150 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr19 11548779 11548779 1 + C T CESC 11548761 + 11548741 11548781 41 GGCTATAAGCCCCTGTATATCCCCTCCAACCGGGTCAACGA GGCTATAAGCCCCTGTATATCCCCTCCAACCGGGTCAATGA < 41bp 1 0.314328676767025 1 0.086852490901947 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548761 chr19:11548779 synonymous SNV . 0 39 hm5C_associated_SNPs_18153 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:11548752-11548781
64251 chr3 124456792 124456792 1 + C T CESC 124456785 + 124456765 124456805 41 GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCC GCACCCAAAGAACTCAGCTTCGGTGCATGTGCAGAGCTGCC < 41bp 1 0.365381635657857 1 0.75896692276001 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UMPS ENSG00000114491 CDS Human protein_coding chr3:124456785 chr3:124456792 nonsynonymous SNV 0.628 4 28 hm5C_associated_SNPs_18154 0 0 8 RTCB POSTAR2 GSE38201,GSM936508 chr3:124456770-124456796
64251 chr16 88804736 88804736 1 - G A CESC 88804748 - 88804728 88804768 41 CCCATCAGCACTCGGGGCTTCAGCAGACTCTGCGTCGCGGT CCCATCAGCACTCGGGGCTTCAGCAGACTCTGTGTCGCGGT < 41bp 1 0.592304716612292 1 0.417135834693909 experiment 0.815390566775416 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIEZO1 ENSG00000103335 CDS Human protein_coding chr16:88804748 chr16:88804736 synonymous SNV . 0 33 hm5C_associated_SNPs_18157 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:88804698-88804775
64251 chr22 41322434 41322434 1 + T C CESC 41322444 + 41322424 41322464 41 CAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT CAGCCAGGCTCCTTGACCTTCACTGCGGCCCACATGCACCT < 41bp 1 0.326157060559291 1 0.252818197011948 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322444 chr22:41322434 nonsynonymous SNV 0.061 1 11 hm5C_associated_SNPs_18158 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:41322418-41322435
64251 chr5 122161787 122161787 1 + G A CESC 122161793 + 122161773 122161813 41 GGCAGAAATGGGAAGATGCTCAAATTACTTTGCTCAAAAAA GGCAGAAATGGGAAAATGCTCAAATTACTTTGCTCAAAAAA < 41bp 1 0.396119581417586 1 0.34554785490036 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122161793 chr5:122161787 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_18159 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:122161744-122161854
64251 chr3 130672712 130672712 1 + G A CESC 130672711 + 130672691 130672731 41 CAGCTTGACAGGTGAGACAACGCCTTGTTCTAAGGTGACAG CAGCTTGACAGGTGAGACAACACCTTGTTCTAAGGTGACAG < 41bp 1 0.60910026858976 1 0.050048291683197 experiment 0.78179946282048 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130672711 chr3:130672712 synonymous SNV . 0 22 hm5C_associated_SNPs_18160 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr3:130672700-130672720
64251 chr1 183083802 183083802 1 + C T CESC 183083799 + 183083779 183083819 41 TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAA TGTGAGAGGTGCCGAGAGAACTTTTTCCGCCTTGGCAACAA < 41bp 1 0.229456653548684 1 0.100185662508011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083799 chr1:183083802 synonymous SNV . 0 24 hm5C_associated_SNPs_18162 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:183083765-183083814
64251 chr1 36028876 36028876 1 + C T CESC 36028874 + 36028854 36028894 41 GATCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGT GATCCTGATCAAGGAAGGGGCCTCCTCGCTTCTGTGCAAGT < 41bp 1 0.0200333372977342 1 0.0964355170726776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028874 chr1:36028876 nonsynonymous SNV 0.984 1 23 hm5C_associated_SNPs_18163 0 0 1 GRWD1 POSTAR2 ENCODE chr1:36028869-36028984
64251 chr9 131830109 131830109 1 + G A CESC 131830119 + 131830099 131830139 41 CCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG CCTGCGGCCCAAGACCTGGGCCACAACACGGCTGGAGCTGG < 41bp 1 0.19343514590606 1 0.0623084008693695 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830119 chr9:131830109 nonsynonymous SNV 0.992 3 11 hm5C_associated_SNPs_18164 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr9 131830109 131830109 1 + G A CESC 131830120 + 131830100 131830140 41 CTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGA CTGCGGCCCAAGACCTGGGCCACAACACGGCTGGAGCTGGA < 41bp 1 0.346335934875702 1 0.134534537792206 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830120 chr9:131830109 nonsynonymous SNV 0.992 3 10 hm5C_associated_SNPs_18165 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr5 176720870 176720870 1 + C T CESC 176720884 + 176720864 176720904 41 CATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAGATGTGCC CATCTGTGGGAAGGAAGCAGCCTCCTTCTGTGAGATGTGCC < 41bp 1 0.0194042175836021 1 0.128821194171906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176720884 chr5:176720870 synonymous SNV . 0 7 hm5C_associated_SNPs_18166 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176720841-176720873
64251 chr1 161138793 161138793 1 + A C CESC 161138789 + 161138769 161138809 41 TGCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCAC TGCTTCCTCTGCAGGGCGGACCCCCCAGCCAGACTCAGCAC < 41bp 1 0.0722066265913075 1 0.0313831567764282 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138789 chr1:161138793 synonymous SNV . 0 25 hm5C_associated_SNPs_18167 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:161138792-161138793
64251 chr1 161138793 161138793 1 + A C CESC 161138790 + 161138770 161138810 41 GCTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACT GCTTCCTCTGCAGGGCGGACCCCCCAGCCAGACTCAGCACT < 41bp 1 0.0704472170081651 1 0.135369300842285 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138790 chr1:161138793 synonymous SNV . 0 24 hm5C_associated_SNPs_18168 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:161138792-161138793
64251 chr1 161138793 161138793 1 + A C CESC 161138791 + 161138771 161138811 41 CTTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACTC CTTCCTCTGCAGGGCGGACCCCCCAGCCAGACTCAGCACTC < 41bp 1 0.681828466383487 1 0.403098791837692 experiment 0.636343067233025 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138791 chr1:161138793 synonymous SNV . 0 23 hm5C_associated_SNPs_18169 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:161138792-161138793
64251 chr1 161138793 161138793 1 + A C CESC 161138792 + 161138772 161138812 41 TTCCTCTGCAGGGCGGACCCCACAGCCAGACTCAGCACTCA TTCCTCTGCAGGGCGGACCCCCCAGCCAGACTCAGCACTCA < 41bp 1 0.187759579528808 1 0.339924395084381 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPOX ENSG00000143224 CDS Human protein_coding chr1:161138792 chr1:161138793 synonymous SNV . 0 22 hm5C_associated_SNPs_18170 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:161138792-161138793
64251 chr19 36640712 36640712 1 + C T CESC 36640710 + 36640690 36640730 41 TCACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTA TCACTCTCCACCCTCCTCTCCCTAGTGGCTGCAGCTGACTA < 41bp 1 0.0846552337790453 1 0.0865050554275513 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640710 chr19:36640712 synonymous SNV . 0 23 hm5C_associated_SNPs_18171 0 0 4 SF3A3 POSTAR2 ENCODE chr19:36640669-36640722
64251 chr19 36640712 36640712 1 + C T CESC 36640711 + 36640691 36640731 41 CACTCTCCACCCTCCTCTCCCCAGTGGCTGCAGCTGACTAT CACTCTCCACCCTCCTCTCCCTAGTGGCTGCAGCTGACTAT < 41bp 1 0.625733913760599 1 0.162849277257919 experiment 0.748532172478802 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640711 chr19:36640712 synonymous SNV . 0 22 hm5C_associated_SNPs_18172 0 0 4 SF3A3 POSTAR2 ENCODE chr19:36640669-36640722
64251 chr3 99509753 99509753 1 + A G CESC 99509758 + 99509738 99509778 41 GCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCA GCAAGGAGATGCCCCGCTTGCAGTATGGCAAAGAGTATCCA < 41bp 1 0.669863560711733 1 0.296440184116364 experiment 0.660272878576535 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99509758 chr3:99509753 nonsynonymous SNV 0.983 2 16 hm5C_associated_SNPs_18173 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr3:99509740-99509760
64251 chr1 110456949 110456949 1 + G A CESC 110456962 + 110456942 110456982 41 AGGTGTCGGAGTACTGTAGCCACATGATTGGGAGTGGACAC AGGTGTCAGAGTACTGTAGCCACATGATTGGGAGTGGACAC < 41bp 1 0.473646224718251 1 0.358493447303772 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110456962 chr1:110456949 synonymous SNV . 0 8 hm5C_associated_SNPs_18174 0 0 2 DDX3X POSTAR2 ENCODE chr1:110456890-110456999
64251 chr10 75529148 75529148 1 + G A CESC 75529135 + 75529115 75529155 41 TTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCAT TTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCACATCCAT < 41bp 1 0.464358821910682 1 0.0707845389842987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529135 chr10:75529148 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_18177 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chr10 75529148 75529148 1 + G A CESC 75529138 + 75529118 75529158 41 ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAAT ACACCAGCTGTGCAGGGCAGCGTCGGCTCCACATCCATAAT < 41bp 1 0.444468897513628 1 0.157404214143753 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529138 chr10:75529148 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_18178 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chr10 75529148 75529148 1 + G A CESC 75529146 + 75529126 75529166 41 TGTGCAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCT TGTGCAGGGCAGCGTCGGCTCCACATCCATAATCTGGCCCT < 41bp 1 0.662398341297286 1 0.0904598236083984 experiment 0.675203317405428 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529146 chr10:75529148 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_18179 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chrX 153696534 153696534 1 + C T CESC 153696529 + 153696509 153696549 41 ACGCCGTGCGCGTGCTCTTCCCGGGCATCGAGGCCCACCCG ACGCCGTGCGCGTGCTCTTCCCGGGTATCGAGGCCCACCCG < 41bp 1 0.680403201101827 1 0.869066655635834 experiment 0.639193597796346 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696529 chrX:153696534 synonymous SNV . 0 26 hm5C_associated_SNPs_18184 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chrX 153696534 153696534 1 + C T CESC 153696537 + 153696517 153696557 41 CGCGTGCTCTTCCCGGGCATCGAGGCCCACCCGGTGCTCAA CGCGTGCTCTTCCCGGGTATCGAGGCCCACCCGGTGCTCAA < 41bp 1 0.737871310350885 1 0.968725442886353 experiment 0.524257379298229 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696537 chrX:153696534 synonymous SNV . 0 18 hm5C_associated_SNPs_18185 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chr13 28854631 28854631 1 + G T CESC 28854635 + 28854615 28854655 41 ATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATG ATTTTATACTCAATTGTATGCTGCTCAAATGAGAAATGATG < 41bp 1 0.183218753889851 1 0.0607247948646545 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAN3 ENSG00000152520 CDS Human protein_coding chr13:28854635 chr13:28854631 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_18186 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr13:28854603-28854631
64251 chr20 62562222 62562222 1 + G A CESC 62562230 + 62562210 62562250 41 TTTGTCTTCTGCGGCCTCCTCACGTGCTGCTACTGCTGCTG TTTGTCTTCTGCAGCCTCCTCACGTGCTGCTACTGCTGCTG < 41bp 1 0.610954571641272 1 0.430665254592896 experiment 0.778090856717455 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJC5 ENSG00000101152 CDS Human protein_coding chr20:62562230 chr20:62562222 nonsynonymous SNV 0.754 1 13 hm5C_associated_SNPs_18187 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:62562200-62562240
64251 chr18 9525743 9525743 1 + G A CESC 9525724 + 9525704 9525744 41 CATTTGCTTTCTAGGAGTTTCTTTTGAATTGTTTACATCGA CATTTGCTTTCTAGGAGTTTCTTTTGAATTGTTTACATCAA < 41bp 1 0.0622567612054042 1 0.284449994564056 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9525724 chr18:9525743 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_18188 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:9525729-9525797
64251 chr16 5123019 5123019 1 + G T CESC 5123009 + 5122989 5123029 41 AATTCAGATTGTGGGGTTGACAGAACTTCAGAGTCTTGCAG AATTCAGATTGTGGGGTTGACAGAACTTCATAGTCTTGCAG < 41bp 1 0.684791934860505 1 0.373697221279144 experiment 0.630416130278989 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5123009 chr16:5123019 nonsynonymous SNV 0.078 1 31 hm5C_associated_SNPs_18189 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:5122942-5123048
64251 chr17 77758700 77758700 1 + C T CESC 77758688 + 77758668 77758708 41 CCGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGAC CCGCCCAGCACTGGACAGAACCCGTCAGTGTCTGTTCAGAC < 41bp 1 0.237714276511803 1 0.0494611263275146 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758688 chr17:77758700 synonymous SNV . 0 33 hm5C_associated_SNPs_18193 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77758700 77758700 1 + C T CESC 77758689 + 77758669 77758709 41 CGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACC CGCCCAGCACTGGACAGAACCCGTCAGTGTCTGTTCAGACC < 41bp 1 0.0773550582849054 1 0.172886550426483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758689 chr17:77758700 synonymous SNV . 0 32 hm5C_associated_SNPs_18194 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77758700 77758700 1 + C T CESC 77758690 + 77758670 77758710 41 GCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACCA GCCCAGCACTGGACAGAACCCGTCAGTGTCTGTTCAGACCA < 41bp 1 0.744587970021905 1 0.0753000676631927 experiment 0.510824059956189 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758690 chr17:77758700 synonymous SNV . 0 31 hm5C_associated_SNPs_18195 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr6 138576706 138576706 1 + G A CESC 138576703 + 138576683 138576723 41 CGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC CGTCTCCGGGAGTGTCTGACCACAGCCGAGGATCAGGCTGC < 41bp 1 0.535571018712248 1 0.596168637275696 experiment 0.928857962575504 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF3 ENSG00000112379 CDS Human protein_coding chr6:138576703 chr6:138576706 nonsynonymous SNV 0.520 4 24 hm5C_associated_SNPs_18196 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:138576682-138576708
64251 chr19 7584327 7584327 1 + G A CESC 7584339 + 7584319 7584359 41 TGGAGCCCGTCTCGGAGGATCTGGACCCCGACGCCGAAGCT TGGAGCCCATCTCGGAGGATCTGGACCCCGACGCCGAAGCT < 41bp 1 0.782136816707885 1 0.733417391777039 experiment 0.435726366584229 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584339 chr19:7584327 nonsynonymous SNV 0.008 0 9 hm5C_associated_SNPs_18203 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:7584311-7584332
64251 chr11 763836 763836 1 + G A CESC 763823 + 763803 763843 41 ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAA ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCAAGATCAA < 41bp 1 0.744762736760841 1 0.807661235332489 experiment 0.510474526478319 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:763823 chr11:763836 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_18204 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:763808-763858
64251 chr21 47983779 47983779 1 + C T CESC 47983797 + 47983777 47983817 41 CCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG CCTGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG < 41bp 1 0.35250351268666 1 0.320117086172104 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47983797 chr21:47983779 synonymous SNV . 0 3 hm5C_associated_SNPs_18205 0 0 4 BUD13 POSTAR2 ENCODE chr21:47983769-47983809
64251 chr20 43530427 43530427 1 + C T CESC 43530409 + 43530389 43530429 41 AGAGGAATGAGAAGAAGCAGCAGATGGGCAAAGAGTACCGT AGAGGAATGAGAAGAAGCAGCAGATGGGCAAAGAGTACTGT < 41bp 1 0.585800781498548 1 0.473661184310913 experiment 0.828398437002904 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout YWHAB ENSG00000166913 CDS Human protein_coding chr20:43530409 chr20:43530427 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_18206 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:43530383-43530459
64251 chr15 57545637 57545637 1 + C T CESC 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC CAATTCAAACTATGGAGGATCAAGCTTTGTTGCAAGCAGTC < 41bp 1 0.270903540386392 1 0.409963518381119 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545637 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_18208 0 0 2 IGF2BP1 POSTAR2 ENCODE chr15:57545594-57545642
64251 chr3 62229570 62229570 1 + C T CESC 62229569 + 62229549 62229589 41 GTATCCCTATTATTCCTATTCCGGGTAAGTAAGACACTGCT GTATCCCTATTATTCCTATTCTGGGTAAGTAAGACACTGCT < 41bp 1 0.41779269593649 1 0.85838782787323 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:62229569 chr3:62229570 nonsynonymous SNV 0.983 2 22 hm5C_associated_SNPs_18209 0 0 1 PRPF8 POSTAR2 ENCODE chr3:62229562-62229607
64251 chr16 731835 731835 1 + C T CESC 731817 + 731797 731837 41 CTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGA CTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGATGA < 41bp 1 0.349380601510293 1 0.119238704442978 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STUB1 ENSG00000103266 CDS Human protein_coding chr16:731817 chr16:731835 synonymous SNV . 0 39 hm5C_associated_SNPs_18210 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr16:731813-731838
64251 chr9 36633156 36633156 1 + C T CESC 36633167 + 36633147 36633187 41 TGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAG TGGATCATGTAAGATTACAACTATCCTGTTGAGTGGCAAAG < 41bp 1 0.114169914258364 1 0.0604482889175415 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MELK ENSG00000165304 CDS Human protein_coding chr9:36633167 chr9:36633156 stopgain 1.000 1 10 hm5C_associated_SNPs_18211 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36633133-36633197
64251 chr10 101515387 101515387 1 + C T CESC 101515406 + 101515386 101515426 41 TCATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATA TTATCTGTTGCCATGGGAGCCTCACTTTCTTGCTCAGAATA < 41bp 1 0.272461339611126 1 0.126042127609253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUTC ENSG00000119929 CDS Human protein_coding chr10:101515406 chr10:101515387 nonsynonymous SNV 0.992 0 2 hm5C_associated_SNPs_18212 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:101515375-101515408
64251 chr1 38484942 38484942 1 + G A CESC 38484930 + 38484910 38484950 41 TGTCTTGAATTTTAGTTGAACAGTTTGATGTCGCAACTCAC TGTCTTGAATTTTAGTTGAACAGTTTGATGTCACAACTCAC < 41bp 1 0.212517797885004 1 0.0604843497276306 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP11 ENSG00000183520 CDS Human protein_coding chr1:38484930 chr1:38484942 nonsynonymous SNV 0.973 4 33 hm5C_associated_SNPs_18213 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:38484826-38484982
64251 chr20 62305397 62305397 1 + G A CESC 62305411 + 62305391 62305431 41 GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG GGCAGCACAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG < 41bp 1 0.0943920883664929 1 0.396569281816483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305411 chr20:62305397 synonymous SNV . 0 7 hm5C_associated_SNPs_18214 0 0 9 BUD13 POSTAR2 ENCODE chr20:62305349-62305408
64251 chr20 62305397 62305397 1 + G A CESC 62305412 + 62305392 62305432 41 GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA GCAGCACAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA < 41bp 1 0.114574226987395 1 0.100426495075226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305412 chr20:62305397 synonymous SNV . 0 6 hm5C_associated_SNPs_18215 0 0 9 BUD13 POSTAR2 ENCODE chr20:62305349-62305408
64251 chr20 62305397 62305397 1 + G A CESC 62305417 + 62305397 62305437 41 GCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGACTCCC ACAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGACTCCC < 41bp 1 0.791066280619727 1 0.872320055961609 experiment 0.417867438760546 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305417 chr20:62305397 synonymous SNV . 0 1 hm5C_associated_SNPs_18216 0 0 9 BUD13 POSTAR2 ENCODE chr20:62305349-62305408
64251 chr6 3267832 3267832 1 + G T CESC 3267826 + 3267806 3267846 41 ATGTGTTTTCTCTTTTTAGCCAGGAAGACCAACAAACAGGT ATGTGTTTTCTCTTTTTAGCCAGGAATACCAACAAACAGGT < 41bp 1 0.785003068953233 1 0.776026964187622 experiment 0.429993862093535 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMG4 ENSG00000180822 CDS Human protein_coding chr6:3267826 chr6:3267832 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_18219 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:3267726-3267842
64251 chr11 94554930 94554930 1 + C T CESC 94554949 + 94554929 94554969 41 ACCGGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT ATCGGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT < 41bp 1 0.302720137067139 1 0.0708515644073486 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94554949 chr11:94554930 synonymous SNV . 0 2 hm5C_associated_SNPs_18222 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:94554918-94554952
64251 chr7 158672563 158672563 1 + A G CESC 158672551 + 158672531 158672571 41 AAAAGTAATTCATTCTCTGACAAAGGGGAAGAAAGACATAA AAAAGTAATTCATTCTCTGACAAAGGGGAAGAGAGACATAA < 41bp 1 0.243672953875436 1 0.518078804016113 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158672551 chr7:158672563 synonymous SNV . 0 33 hm5C_associated_SNPs_18223 0 0 2 AARS POSTAR2 ENCODE chr7:158672506-158672565
64251 chr17 7466578 7466578 1 + G A CESC 7466589 + 7466569 7466609 41 CAGCCAGACGCCTCCCTGTCCCCCGACCCTCTTTTGATGCC CAGCCAGACACCTCCCTGTCCCCCGACCCTCTTTTGATGCC < 41bp 1 0.265802718929349 1 0.051455169916153 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466589 chr17:7466578 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_18224 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7466554-7466597
64251 chr2 157407249 157407249 1 + G A CESC 157407233 + 157407213 157407253 41 GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCCTGGTTAT GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCCTGATTAT < 41bp 1 0.144308249846649 1 0.275337010622025 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407233 chr2:157407249 nonsynonymous SNV 0.983 1 37 hm5C_associated_SNPs_18225 0 0 1 PRPF8 POSTAR2 ENCODE chr2:157407242-157407319
64251 chr1 161132171 161132171 1 + C A CESC 161132159 + 161132139 161132179 41 AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTCACTGAA AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGATCACTGAA < 41bp 1 0.420179011902257 1 0.685475170612335 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161132159 chr1:161132171 nonsynonymous SNV 0.989 1 33 hm5C_associated_SNPs_18227 0 0 5 DDX24 POSTAR2 ENCODE chr1:161132163-161132179
64251 chr1 114514527 114514527 1 + G A CESC 114514546 + 114514526 114514566 41 CGAGCTCAACGCGGGGGGACCAGTGCAGCACAACCACTCAA CAAGCTCAACGCGGGGGGACCAGTGCAGCACAACCACTCAA < 41bp 1 0.532080432561213 1 0.688127517700195 experiment 0.935839134877574 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114514546 chr1:114514527 nonsynonymous SNV 0.915 4 2 hm5C_associated_SNPs_18228 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:114514494-114514532
64251 chr3 136665007 136665007 1 + G A CESC 136664991 + 136664971 136665011 41 GTTTGGAACCATCACCTCCACAGTGTGATTACATTAGGCCT GTTTGGAACCATCACCTCCACAGTGTGATTACATTAAGCCT < 41bp 1 0.563899874578936 1 0.109717518091202 experiment 0.872200250842129 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664991 chr3:136665007 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_18229 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:136664997-136665026
64251 chr9 134350191 134350191 1 + G A CESC 134350189 + 134350169 134350209 41 GGTGTTGAGCGGGAGACACCCCGGGAGGGGACGGCCTTTAA GGTGTTGAGCGGGAGACACCCCAGGAGGGGACGGCCTTTAA < 41bp 1 0.51484530292426 1 0.735967040061951 experiment 0.97030939415148 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134350189 chr9:134350191 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_18230 0 0 2 FXR2 POSTAR2 ENCODE chr9:134350145-134350205
64251 chr15 89172590 89172590 1 + G A CESC 89172606 + 89172586 89172626 41 CCCGGCCTCCACACCCGGGCCCGGGTCTCTCTAAAGGACCT CCCGACCTCCACACCCGGGCCCGGGTCTCTCTAAAGGACCT < 41bp 1 0.375734203704407 1 0.234626233577728 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89172606 chr15:89172590 nonsynonymous SNV 0.003 0 5 hm5C_associated_SNPs_18231 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:89172565-89172601
64251 chr16 67314354 67314354 1 + C T CESC 67314349 + 67314329 67314369 41 GTAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTGGCTT GTAGGGGACCCAGGTCCAAGCAGGGTGATGCCATCTGGCTT < 41bp 1 0.784630475962882 1 0.906008124351501 experiment 0.430739048074236 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67314349 chr16:67314354 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_18233 0 0 1 BUD13 POSTAR2 ENCODE chr16:67314321-67314380
64251 chr7 138944052 138944052 1 + C T CESC 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAAGTGGAAGCGGAAAGAGGAAGGGGAAAAG < 41bp 1 0.48847045831158 1 0.653716802597046 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944052 nonsynonymous SNV 0.996 4 15 hm5C_associated_SNPs_18234 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr10 70738628 70738628 1 + A G CESC 70738609 + 70738589 70738629 41 TGTTGTAAGGGTTTTGTGACCATGATCTTGCAGTGCTCAAT TGTTGTAAGGGTTTTGTGACCATGATCTTGCAGTGCTCAGT < 41bp 1 0.580471865009779 1 0.109519600868225 experiment 0.839056269980441 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70738609 chr10:70738628 nonsynonymous SNV 0.992 0 40 hm5C_associated_SNPs_18235 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70738600-70738660
64251 chr6 26468224 26468224 1 + C T CESC 26468231 + 26468211 26468251 41 GATCTCTTCCTGTCAGAGGACCGGAGAAGTGTGAGAAGGTG GATCTCTTCCTGTTAGAGGACCGGAGAAGTGTGAGAAGGTG < 41bp 1 0.798016918459553 1 0.499956339597702 experiment 0.403966163080895 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468231 chr6:26468224 nonsynonymous SNV 0.968 3 14 hm5C_associated_SNPs_18242 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26468190-26468226
64251 chr3 184026613 184026613 1 + C T CESC 184026617 + 184026597 184026637 41 GGCCACTGAGGAGTTTCTTCCTGTTACCCCCATTCTGGAAG GGCCACTGAGGAGTTTTTTCCTGTTACCCCCATTCTGGAAG < 41bp 1 0.467762111417299 1 0.0358213782310486 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184026617 chr3:184026613 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_18243 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184026600-184026620
64251 chr17 29554588 29554588 1 + C G CESC 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATGGGAACAAGCAACAAAGCTAATGCTTAACTATCCAAAA < 41bp 1 0.177807941256419 1 0.0828804969787598 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554588 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_18244 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29554582-29554612
64251 chr17 17697205 17697205 1 + G A CESC 17697208 + 17697188 17697228 41 CCAAGTATCAGCACTACGGGCAGCAAGGCCAGGGCTACTGC CCAAGTATCAGCACTACAGGCAGCAAGGCCAGGGCTACTGC < 41bp 1 0.571379418607072 1 0.55619204044342 experiment 0.857241162785856 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697208 chr17:17697205 nonsynonymous SNV 0.993 2 18 hm5C_associated_SNPs_18246 0 0 1 EIF3H POSTAR2 ENCODE chr17:17697205-17697209
64251 chr13 48937001 48937001 1 + C T CESC 48936995 + 48936975 48937015 41 GTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCA GTTCACCTCGAACACCCAGGCGAGGTTAGAACAGGAGTGCA < 41bp 1 0.693117081448509 1 0.801494300365448 experiment 0.613765837102982 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48936995 chr13:48937001 stopgain 1.000 1 27 hm5C_associated_SNPs_18247 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48936989-48937032
64251 chr4 502747 502747 1 + G C CESC 502758 + 502738 502778 41 TCTGCGTTTGAAAGGAAACCCGGTGAGAATTTAGGAATGTT TCTGCGTTTCAAAGGAAACCCGGTGAGAATTTAGGAATGTT < 41bp 1 0.201148216196999 1 0.362248867750168 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:502758 chr4:502747 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_18250 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr4:502732-502764
64251 chrX 47065735 47065735 1 + G A CESC 47065738 + 47065718 47065758 41 GGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCGTA GGCAATGTGCAGGTGGTAATCCCCTTCCTGACAGAGTCGTA < 41bp 1 0.39417565155998 1 0.32927805185318 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47065738 chrX:47065735 synonymous SNV . 0 18 hm5C_associated_SNPs_18261 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:47065720-47065740
64251 chr5 65349712 65349712 1 + C G CESC 65349718 + 65349698 65349738 41 AAAGCACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGTT AAAGCACTGAAGATGTCTCCCCTCAGAAAAGTGGTCCAGTT < 41bp 1 0.273268495111553 1 0.110554218292236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349718 chr5:65349712 nonsynonymous SNV 0.988 2 15 hm5C_associated_SNPs_18262 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349589-65349713
64251 chr5 65349712 65349712 1 + C G CESC 65349721 + 65349701 65349741 41 GCACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGTTGGA GCACTGAAGATGTCTCCCCTCAGAAAAGTGGTCCAGTTGGA < 41bp 1 0.614505070049508 1 0.777742147445679 experiment 0.770989859900984 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349721 chr5:65349712 nonsynonymous SNV 0.988 2 12 hm5C_associated_SNPs_18263 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349589-65349713
64251 chr15 77756669 77756669 1 + G A CESC 77756689 + 77756669 77756709 41 GTTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATG ATTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATG < 41bp 1 0.479362825202914 1 0.249027281999588 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HMG20A ENSG00000140382 CDS Human protein_coding chr15:77756689 chr15:77756669 synonymous SNV . 0 1 hm5C_associated_SNPs_18264 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:77756665-77756694
64251 chr3 182597360 182597360 1 + G A CESC 182597357 + 182597337 182597377 41 TATCTCTTGCACTCAGGGAGCATGAAAAACTATTTATGGAA TATCTCTTGCACTCAGGGAGCATAAAAAACTATTTATGGAA < 41bp 1 0.271765917158784 1 0.430989235639572 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP11B ENSG00000058063 CDS Human protein_coding chr3:182597357 chr3:182597360 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_18265 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:182597360-182597380
64251 chr1 31811835 31811835 1 + C G CESC 31811833 + 31811813 31811853 41 GATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCA GATAGAATAAAAGTATCCCTCTGCATGAAGGTTGTCAATCA < 41bp 1 0.797837081498854 1 0.915084958076477 experiment 0.404325837002293 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC17 ENSG00000121766 CDS Human protein_coding chr1:31811833 chr1:31811835 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_18266 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:31811813-31811842
64251 chrX 152954131 152954131 1 + C T CESC 152954118 + 152954098 152954138 41 CGCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCC CGCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGTGACGGCC < 41bp 1 0.335654261276265 1 0.361343681812286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954118 chrX:152954131 synonymous SNV . 0 34 hm5C_associated_SNPs_18268 0 0 9 BUD13 POSTAR2 ENCODE chrX:152954072-152954135
64251 chrX 152954131 152954131 1 + C T CESC 152954119 + 152954099 152954139 41 GCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCCC GCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGTGACGGCCC < 41bp 1 0.610427105871455 1 0.329592287540436 experiment 0.77914578825709 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954119 chrX:152954131 synonymous SNV . 0 33 hm5C_associated_SNPs_18269 0 0 9 BUD13 POSTAR2 ENCODE chrX:152954072-152954135
64251 chr1 976894 976894 1 + G T CESC 976875 + 976855 976895 41 CAGACCCCTGTCAGGGCGCCCTCCCTGACCCGAGCCGCAGC CAGACCCCTGTCAGGGCGCCCTCCCTGACCCGAGCCGCATC < 41bp 1 0.163763011600412 1 0.33487930893898 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:976875 chr1:976894 nonsynonymous SNV 0.026 0 40 hm5C_associated_SNPs_18270 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:976881-976910
64251 chrX 73046100 73046100 1 - G A CESC 73046118 - 73046098 73046138 41 TTGACCCCAGAAGCCCTAGACTGAGAAGATAAAATGGTCAG TTGACCCCAGAAGCCCTAGACTGAGAAGATAAAATGGTTAG < 41bp 1 0.271082529018449 1 0.323838710784912 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046118 chrX:73046100 . . 0 39 hm5C_associated_SNPs_18272 0 0 106 HNRNPH1 POSTAR2 GSE23694,GSM581051 chrX:73046080-73046100
64251 chr19 42373233 42373233 1 + G T CESC 42373215 + 42373195 42373235 41 CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGG CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCTGG < 41bp 1 0.28901666550597 1 0.301229298114777 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373215 chr19:42373233 nonsynonymous SNV 0.971 2 39 hm5C_associated_SNPs_18273 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373233 42373233 1 + G T CESC 42373228 + 42373208 42373248 41 CGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT CGAGGCTCCAAGAGTGTGGCCCGCCTGGTCCTCCAAGCCCT < 41bp 1 0.239882868066478 1 0.0407093167304993 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373228 chr19:42373233 nonsynonymous SNV 0.971 2 26 hm5C_associated_SNPs_18274 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373233 42373233 1 + G T CESC 42373231 + 42373211 42373251 41 GGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGA GGCTCCAAGAGTGTGGCCCGCCTGGTCCTCCAAGCCCTGGA < 41bp 1 0.276051477841292 1 0.0840632617473602 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373231 chr19:42373233 nonsynonymous SNV 0.971 2 23 hm5C_associated_SNPs_18275 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373233 42373233 1 + G T CESC 42373232 + 42373212 42373252 41 GCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAG GCTCCAAGAGTGTGGCCCGCCTGGTCCTCCAAGCCCTGGAG < 41bp 1 0.725363935275115 1 0.266838729381561 experiment 0.549272129449771 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373232 chr19:42373233 nonsynonymous SNV 0.971 2 22 hm5C_associated_SNPs_18276 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373233 42373233 1 + G T CESC 42373237 + 42373217 42373257 41 AAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCT AAGAGTGTGGCCCGCCTGGTCCTCCAAGCCCTGGAGGGGCT < 41bp 1 0.0756367874786204 1 0.121882349252701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373237 chr19:42373233 nonsynonymous SNV 0.971 2 17 hm5C_associated_SNPs_18277 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr2 10188421 10188421 1 + T G CESC 10188402 + 10188382 10188422 41 TCCCCAGTTGTCTGTGGGGACTGTGAGACCCATCCTAGCTC TCCCCAGTTGTCTGTGGGGACTGTGAGACCCATCCTAGCGC < 41bp 1 0.574400483806547 1 0.0852572321891785 experiment 0.851199032386905 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188402 chr2:10188421 synonymous SNV . 0 40 hm5C_associated_SNPs_18278 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:10188408-10188445
64251 chr19 34818694 34818694 1 + G T CESC 34818689 + 34818669 34818709 41 TTTCCAGGCATATAAGATAGCTCTGGAAAGCTTAGGACACT TTTCCAGGCATATAAGATAGCTCTGTAAAGCTTAGGACACT < 41bp 1 0.175845601354364 1 0.252857714891434 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34818689 chr19:34818694 stopgain 1.000 1 26 hm5C_associated_SNPs_18279 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:34818682-34818715
64251 chr1 206902147 206902147 1 + C T CESC 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGGATCGTGGATGTGTATGAGAATCT < 41bp 1 0.500139250657468 1 0.118220925331116 experiment 0.999721498685064 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902147 synonymous SNV . 0 33 hm5C_associated_SNPs_18291 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:206902123-206902184
64251 chr17 28772947 28772947 1 + C A CESC 28772959 + 28772939 28772979 41 ATCTGGCTCTGGCTCTTTATCGATACCATTCCTACAAAGAC ATCTGGCTATGGCTCTTTATCGATACCATTCCTACAAAGAC < 41bp 1 0.538365775000772 1 0.706809282302856 experiment 0.923268449998456 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPD ENSG00000108582 CDS Human protein_coding chr17:28772959 chr17:28772947 nonsynonymous SNV 0.984 1 9 hm5C_associated_SNPs_18292 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28772922-28772958
64251 chr12 56536116 56536116 1 + C G CESC 56536133 + 56536113 56536153 41 CCTCTCAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACC CCTGTCAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACC < 41bp 1 0.245354448549805 1 0.0653214752674103 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536133 chr12:56536116 synonymous SNV . 0 4 hm5C_associated_SNPs_18293 0 0 2 RPS3 POSTAR2 ENCODE chr12:56536070-56536126
64251 chr22 24237116 24237116 1 + G C CESC 24237096 + 24237076 24237116 41 TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCG TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCC < 41bp 1 0.137166559122762 1 0.0966968834400177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237096 chr22:24237116 nonsynonymous SNV 0.992 0 41 hm5C_associated_SNPs_18294 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237116 24237116 1 + G C CESC 24237109 + 24237089 24237129 41 TGTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGAC TGTGCGGCCTGCTGGCCGAGCGCCTGCCCATCAGCCCGGAC < 41bp 1 0.580492687423361 1 0.114024579524994 experiment 0.839014625153277 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237109 chr22:24237116 nonsynonymous SNV 0.992 0 28 hm5C_associated_SNPs_18295 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237116 24237116 1 + G C CESC 24237117 + 24237097 24237137 41 CTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGC CTGCTGGCCGAGCGCCTGCCCATCAGCCCGGACAGGTACGC < 41bp 1 0.618279741944118 1 0.168879985809326 experiment 0.763440516111764 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237117 chr22:24237116 nonsynonymous SNV 0.992 0 20 hm5C_associated_SNPs_18296 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237116 24237116 1 + G C CESC 24237120 + 24237100 24237140 41 CTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGCGGA CTGGCCGAGCGCCTGCCCATCAGCCCGGACAGGTACGCGGA < 41bp 1 0.597481249761867 1 0.587196052074432 experiment 0.805037500476266 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237120 chr22:24237116 nonsynonymous SNV 0.992 0 17 hm5C_associated_SNPs_18297 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr2 175268854 175268854 1 + C G CESC 175268839 + 175268819 175268859 41 CTTTGAAAATAGAGGGAGTTCGTAATATTTCTAATCAACTT CTTTGAAAATAGAGGGAGTTCGTAATATTTCTAATGAACTT < 41bp 1 0.597700125400747 1 0.253552228212357 experiment 0.804599749198505 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175268839 chr2:175268854 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_18299 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:175268836-175268874
64251 chr14 72152249 72152249 1 + G A CESC 72152244 + 72152224 72152264 41 CAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA CAGGTGCAGAGTCCCATGACCTCGCAGCTGAATGCTGGAAA < 41bp 1 0.399597602434122 1 0.244484126567841 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152244 chr14:72152249 nonsynonymous SNV 0.888 1 26 hm5C_associated_SNPs_18300 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr14 72152249 72152249 1 + G A CESC 72152246 + 72152226 72152266 41 GGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAAAG GGTGCAGAGTCCCATGACCTCGCAGCTGAATGCTGGAAAAG < 41bp 1 0.633003427383631 1 0.392364203929901 experiment 0.733993145232739 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152246 chr14:72152249 nonsynonymous SNV 0.888 1 24 hm5C_associated_SNPs_18301 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr6 31600766 31600766 1 + G A CESC 31600751 + 31600731 31600771 41 AGGCGACAAGAGGAGCTGGCCCTCTCCCAAGAACCGAAGGT AGGCGACAAGAGGAGCTGGCCCTCTCCCAAGAACCAAAGGT < 41bp 1 0.0944919442346538 1 0.108713060617447 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31600751 chr6:31600766 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_18302 0 0 2 SERBP1 POSTAR2 ENCODE chr6:31600756-31600770
64251 chr6 31600766 31600766 1 + G A CESC 31600754 + 31600734 31600774 41 CGACAAGAGGAGCTGGCCCTCTCCCAAGAACCGAAGGTGGG CGACAAGAGGAGCTGGCCCTCTCCCAAGAACCAAAGGTGGG < 41bp 1 0.283144123225353 1 0.583602786064148 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31600754 chr6:31600766 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_18303 0 0 2 SERBP1 POSTAR2 ENCODE chr6:31600756-31600770
64251 chr1 44684037 44684037 1 + G C CESC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATCAT < 41bp 1 0.599640164787394 1 0.313158273696899 experiment 0.800719670425212 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684037 nonsynonymous SNV 0.963 1 39 hm5C_associated_SNPs_18305 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:44684024-44684054
64251 chr3 47882504 47882504 1 + G C CESC 47882499 + 47882479 47882519 41 TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTATT TGCCCCCTACTTCCTGGCGGCAGCTCAATCCAGAGAGTATT < 41bp 1 0.184138818398359 1 0.0674141943454742 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47882499 chr3:47882504 synonymous SNV . 0 26 hm5C_associated_SNPs_18306 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr3:47882469-47882504
64251 chr16 31131776 31131776 1 + G A CESC 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTAAGCGCAAGATCACTCGCAACCAAAAGCGCAA < 41bp 1 0.230844493357083 1 0.0528246164321899 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131776 nonsynonymous SNV 0.992 1 10 hm5C_associated_SNPs_18307 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:31131660-31131784
64251 chr11 65270077 65270077 1 + G C CESC 65270066 + 65270046 65270086 41 AATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGG AATGTCTCTTAGAGGGTGGGCTTTTGTTGATCAGGGAGGGG < 41bp 1 0.0652594415962631 1 0.0844070017337799 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270066 chr11:65270077 . . 0 32 hm5C_associated_SNPs_18308 0 0 68 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65266540-65270640
64251 chr6 32943932 32943932 1 + G A CESC 32943944 + 32943924 32943964 41 CAAGAAGGGGGCCAAGTTGGCAGGTAGGAAGAGTGGGAGTT CAAGAAGGAGGCCAAGTTGGCAGGTAGGAAGAGTGGGAGTT < 41bp 1 0.551038580563922 1 0.744854807853699 experiment 0.897922838872155 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32943944 chr6:32943932 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_18309 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32943812-32943935
64251 chr1 2087470 2087470 1 + G C CESC 2087488 + 2087468 2087508 41 TTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACAC TTCAGCAGGCATCCAGCAACCCCTTCCTGGTCGGATTACAC < 41bp 1 0.0674006009686283 1 0.0408521890640259 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2087488 chr1:2087470 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_18311 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2087464-2087494
64251 chr12 101674919 101674919 1 + G A CESC 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACATTTGCTGAACGACTGGAGAATGTTAATATTGAT < 41bp 1 0.467486919244029 1 0.275809526443481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674919 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_18312 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chrX 123229269 123229269 1 + C A CESC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTAT < 41bp 1 0.501187736339537 1 0.417167216539383 experiment 0.997624527320926 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229269 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_18313 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:123229228-123229272
64251 chr16 15788036 15788036 1 + A G CESC 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCGCCGGGGGGACCCCCCTCACACCTGCGGCCCG < 41bp 1 0.223323953042903 1 0.184419870376587 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788036 nonsynonymous SNV 0.261 0 10 hm5C_associated_SNPs_18314 0 0 3 DDX24 POSTAR2 ENCODE chr16:15788032-15788113
64251 chr15 63481897 63481897 1 + T G CESC 63481916 + 63481896 63481936 41 CTGTTCCGCTTCTCAGAGGACGCCTTCAACACCACCTTCAT CGGTTCCGCTTCTCAGAGGACGCCTTCAACACCACCTTCAT < 41bp 1 0.604122244253191 1 0.0968928039073944 experiment 0.791755511493618 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB8B ENSG00000166128 CDS Human protein_coding chr15:63481916 chr15:63481897 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_18315 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:63481886-63481917
64251 chr10 93600322 93600322 1 + T G CESC 93600328 + 93600308 93600348 41 TGTCCTTCAGAAACTGTGTACTGTTCAGAGTGTCAACTGCA TGTCCTTCAGAAACGGTGTACTGTTCAGAGTGTCAACTGCA < 41bp 1 0.07928120678029 1 0.0365868508815765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93600328 chr10:93600322 nonsynonymous SNV 0.998 3 15 hm5C_associated_SNPs_18316 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:93600321-93600363
64251 chrX 135106607 135106607 1 + T C CESC 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTGGTGGCGGCACCACTGCAATGCTGTCATGCTT < 41bp 1 0.318759801994072 1 0.562820911407471 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106607 synonymous SNV . 0 15 hm5C_associated_SNPs_18317 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:135106590-135106609
64251 chr1 24022863 24022863 1 + A C CESC 24022845 + 24022825 24022865 41 CTCTTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAAT CTCTTTCAGTATGATGGGATCATCCTTCCTGGCAAATACAT < 41bp 1 0.0962219066740706 1 0.0308486819267273 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022845 chr1:24022863 stoploss 1.000 0 39 hm5C_associated_SNPs_18318 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24022842-24022870
64251 chr1 24022863 24022863 1 + A C CESC 24022848 + 24022828 24022868 41 TTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCC TTTCAGTATGATGGGATCATCCTTCCTGGCAAATACATTCC < 41bp 1 0.0400447323837332 1 0.0410789847373962 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022848 chr1:24022863 stoploss 1.000 0 36 hm5C_associated_SNPs_18319 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24022842-24022870
64251 chr18 48446854 48446854 1 + G A CESC 48446838 + 48446818 48446858 41 GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCGAAGA GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCAAAGA < 41bp 1 0.238926287697375 1 0.155387878417969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ME2 ENSG00000082212 CDS Human protein_coding chr18:48446838 chr18:48446854 nonsynonymous SNV 0.983 4 37 hm5C_associated_SNPs_18321 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr18:48446825-48446855
64251 chr6 144724303 144724303 1 + A C CESC 144724309 + 144724289 144724329 41 TTACCAAATGGATAAATGCTCGATTTTCAAAGGTAACTGAG TTACCAAATGGATACATGCTCGATTTTCAAAGGTAACTGAG < 41bp 1 0.0760383588658595 1 0.129245847463608 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144724309 chr6:144724303 nonsynonymous SNV 0.985 5 15 hm5C_associated_SNPs_18322 0 0 1 GRWD1 POSTAR2 ENCODE chr6:144724303-144724320
64251 chr9 128678194 128678194 1 + G T CESC 128678180 + 128678160 128678200 41 CCCAGATCAGACAAATCTATCACACAGAACTGGAGAAATAT CCCAGATCAGACAAATCTATCACACAGAACTGGATAAATAT < 41bp 1 0.223269929612656 1 0.0834093391895294 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PBX3 ENSG00000167081 CDS Human protein_coding chr9:128678180 chr9:128678194 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18323 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:128678179-128678208
64251 chr5 71493364 71493364 1 + T G CESC 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTGTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC < 41bp 1 0.203429409427404 1 0.185040414333344 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493364 synonymous SNV . 0 6 hm5C_associated_SNPs_18324 0 0 6 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:71493342-71493381
64251 chr5 71493364 71493364 1 + T G CESC 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TGTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG < 41bp 1 0.0404012130714111 1 0.115799516439438 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493364 synonymous SNV . 0 2 hm5C_associated_SNPs_18325 0 0 6 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:71493342-71493381
64251 chr5 139494072 139494072 1 + C T CESC 139494074 + 139494054 139494094 41 CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGT CAAGAGCCGCCTTACTCTTTCCATGTCAGTGGCCGTGGAGT < 41bp 1 0.203732992934647 1 0.244440972805023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PURA ENSG00000185129 CDS Human protein_coding chr5:139494074 chr5:139494072 synonymous SNV . 0 19 hm5C_associated_SNPs_18326 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139494054-139494076
64251 chr9 140622861 140622861 1 + G T CESC 140622869 + 140622849 140622889 41 AAGGAACCAAAAGAGGAGATCAACAAAAACATTTCTGACTT AAGGAACCAAAATAGGAGATCAACAAAAACATTTCTGACTT < 41bp 1 0.42255400519009 1 0.3763707280159 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140622869 chr9:140622861 stopgain 0.965 0 13 hm5C_associated_SNPs_18331 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:140622821-140622869
64251 chr10 5791144 5791144 1 + G C CESC 5791136 + 5791116 5791156 41 CTTACGTCCAAATCCGAGATCTCCACGGGATCCTCAGGACT CTTACGTCCAAATCCGAGATCTCCACGGCATCCTCAGGACT < 41bp 1 0.537730654003529 1 0.532480418682098 experiment 0.924538691992941 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5791136 chr10:5791144 synonymous SNV . 0 29 hm5C_associated_SNPs_18332 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:5791134-5791160
64251 chr17 78319224 78319224 1 + C T CESC 78319214 + 78319194 78319234 41 CCTGCTGCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATA CCTGCTGCTCCAGAGGGTGCCCTTCAATGTTGACTTTGATA < 41bp 1 0.00368121681278305 1 0.0440967082977295 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78319214 chr17:78319224 synonymous SNV . 0 31 hm5C_associated_SNPs_18333 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78319219-78319235
64251 chr1 117626692 117626692 1 + G A CESC 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTAATCCA < 41bp 1 0.134167368926448 1 0.088619738817215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626692 synonymous SNV . 0 36 hm5C_associated_SNPs_18335 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117626608-117626693
64251 chr4 56230311 56230311 1 + C T CESC 56230318 + 56230298 56230338 41 TACGAAGACTCTTCGAGTGCCTCTACGTCAGTGTCTTCTCC TACGAAGACTCTTTGAGTGCCTCTACGTCAGTGTCTTCTCC < 41bp 1 0.505357396652724 1 0.186865955591202 experiment 0.989285206694553 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56230318 chr4:56230311 synonymous SNV . 0 14 hm5C_associated_SNPs_18336 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:56230304-56230324
64251 chr7 101837145 101837145 1 + C T CESC 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGTACCGTCCGAGGGCGCTGGGACA < 41bp 1 0.0181393483226693 1 0.114587038755417 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837145 nonsynonymous SNV 0.953 1 19 hm5C_associated_SNPs_18337 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 101837145 101837145 1 + C T CESC 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGTACCGTCCGAGGGCGCTGGGACAC < 41bp 1 0.121901218857896 1 0.444534957408905 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837145 nonsynonymous SNV 0.953 1 18 hm5C_associated_SNPs_18338 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr12 31244671 31244671 1 + C T CESC 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATTAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG < 41bp 1 0.563646283246925 1 0.419142127037048 experiment 0.872707433506149 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244671 stopgain 0.987 1 5 hm5C_associated_SNPs_18339 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr12 31244671 31244671 1 + C T CESC 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT TAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT < 41bp 1 0.240247380595064 1 0.0578725934028625 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244671 stopgain 0.987 1 1 hm5C_associated_SNPs_18340 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr18 29171890 29171890 1 + C G CESC 29171892 + 29171872 29171912 41 TCTCATCGTCTGCTCCTCCTCTGCCTTGCTGGACTGGTATT TCTCATCGTCTGCTCCTCGTCTGCCTTGCTGGACTGGTATT < 41bp 1 0.458196166286543 1 0.174120217561722 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTR ENSG00000118271 CDS Human protein_coding chr18:29171892 chr18:29171890 nonsynonymous SNV 0.416 1 19 hm5C_associated_SNPs_18341 0 0 5 DDX3X POSTAR2 ENCODE chr18:29171852-29171907
64251 chr1 145115802 145115802 1 + G C CESC 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACTTCAACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0428196526562986 1 0.0602039992809296 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115802 . . 0 14 hm5C_associated_SNPs_18342 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145115755-145115805
64251 chr19 58906057 58906057 1 + G A CESC 58906069 + 58906049 58906089 41 GGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGACGAGCT GGCTCCTCAAACTCCTATGCCATTAAGAAGAAGGACGAGCT < 41bp 1 0.176598331355957 1 0.0561041235923767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906069 chr19:58906057 synonymous SNV . 0 9 hm5C_associated_SNPs_18344 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr11 606580 606580 1 + C G CESC 606594 + 606574 606614 41 CTCCCTCAGCGCCAAGAGGGCGGGTGAGTGCCTTCCCTGCC CTCCCTGAGCGCCAAGAGGGCGGGTGAGTGCCTTCCCTGCC < 41bp 1 0.782947411308687 1 0.848118901252747 experiment 0.434105177382627 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:606594 chr11:606580 synonymous SNV . 0 7 hm5C_associated_SNPs_18346 0 0 2 AARS POSTAR2 ENCODE chr11:606562-606598
64251 chr3 9784724 9784724 1 + G A CESC 9784735 + 9784715 9784755 41 GATGATTTTGAGGAGGACTTCAACCTCATCGTCAGCAACTG GATGATTTTAAGGAGGACTTCAACCTCATCGTCAGCAACTG < 41bp 1 0.240169480676645 1 0.230959862470627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9784735 chr3:9784724 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_18347 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:9784718-9784745
64251 chr11 68125245 68125245 1 + G T CESC 68125248 + 68125228 68125268 41 TGACCATCGACCTGGAGGAGCAGAAGCTCTACTGGGCTGAC TGACCATCGACCTGGAGTAGCAGAAGCTCTACTGGGCTGAC < 41bp 1 0.570289056171664 1 0.727347493171692 experiment 0.859421887656672 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68125248 chr11:68125245 stopgain 0.999 0 18 hm5C_associated_SNPs_18348 0 0 8 FMR1 POSTAR2 ENCODE chr11:68125213-68125256
64251 chr8 124146362 124146362 1 + G C CESC 124146369 + 124146349 124146389 41 CATAGGTATATATGAGAGATCGAGAAATTGCTGCCACAGCC CATAGGTATATATCAGAGATCGAGAAATTGCTGCCACAGCC < 41bp 1 0.785787377325737 1 0.712713360786438 experiment 0.428425245348526 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124146369 chr8:124146362 nonsynonymous SNV 0.927 0 14 hm5C_associated_SNPs_18349 0 0 1 ZNF622 POSTAR2 ENCODE chr8:124146357-124146423
64251 chr19 18254649 18254649 1 + C G CESC 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC CAGCCCATCTGTCCTGAATACCATCAGCCTGGACACAATGC < 41bp 1 0.0159584640444964 1 0.0138346552848816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254649 nonsynonymous SNV 0.038 0 11 hm5C_associated_SNPs_18350 0 0 2 PPIG POSTAR2 ENCODE chr19:18254596-18254696
64251 chr3 48501272 48501272 1 + G A CESC 48501254 + 48501234 48501274 41 CATCCCTAAGCCTTTGCCACCTCCTGAGTAGTAGTTCTGAG CATCCCTAAGCCTTTGCCACCTCCTGAGTAGTAGTTCTAAG < 41bp 1 0.20755780131565 1 0.20822149515152 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48501254 chr3:48501272 nonsynonymous SNV 0.989 3 39 hm5C_associated_SNPs_18351 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:48501262-48501290
64251 chrX 73043756 73043756 1 - G A CESC 73043738 - 73043718 73043758 41 TTCTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT TTTTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT < 41bp 1 0.0633725491673816 1 0.240299433469772 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043738 chrX:73043756 . . 0 3 hm5C_associated_SNPs_18352 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043756 73043756 1 - G A CESC 73043746 - 73043726 73043766 41 TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGGAT TGATTACTTTTTGTGGGGCTCGGAACTACATGCCCTAGGAT < 41bp 1 0.280522624288219 1 0.786957263946533 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043746 chrX:73043756 . . 0 11 hm5C_associated_SNPs_18353 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043756 73043756 1 - G A CESC 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG GGTGATTACTTTTTGTGGGGCTCGGAACTACATGCCCTAGG < 41bp 1 0.269697093183617 1 0.21326008439064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043756 . . 0 13 hm5C_associated_SNPs_18354 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr17 41154798 41154798 1 + G C CESC 41154779 + 41154759 41154799 41 ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGA ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGACA < 41bp 1 0.4966246743986 1 0.40775939822197 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154779 chr17:41154798 nonsynonymous SNV 0.985 1 40 hm5C_associated_SNPs_18355 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:41154687-41154800
64251 chr7 45662258 45662258 1 + C G CESC 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GTTTGACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG < 41bp 1 0.468490072765682 1 0.545621931552887 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662258 nonsynonymous SNV 0.997 5 5 hm5C_associated_SNPs_18356 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:45662233-45662265
64251 chr17 46135815 46135815 1 + C G CESC 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACTTCTTACTGTTCAGCCCCGAGGTGGAAAGCCTGCCTGT < 41bp 1 0.796002369240688 1 0.783642113208771 experiment 0.407995261518624 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135815 synonymous SNV . 0 12 hm5C_associated_SNPs_18358 0 0 21 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr16 89603184 89603184 1 + G A CESC 89603199 + 89603179 89603219 41 CTCTTGACCAGCTACCCTCCCAGGGGACCATGAGGAAGCTC CTCTTAACCAGCTACCCTCCCAGGGGACCATGAGGAAGCTC < 41bp 1 0.710432999834381 1 0.743716597557068 experiment 0.579134000331237 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89603199 chr16:89603184 nonsynonymous SNV 0.031 1 6 hm5C_associated_SNPs_18359 0 0 1 PRPF8 POSTAR2 ENCODE chr16:89603146-89603199
64251 chr3 184040704 184040704 1 + G A CESC 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CCAAAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA < 41bp 1 0.648864143941502 1 0.338058412075043 experiment 0.702271712116997 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040704 nonsynonymous SNV 0.979 3 4 hm5C_associated_SNPs_18360 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chr9 5770130 5770130 1 + G A CESC 5770122 + 5770102 5770142 41 TAAAGTCTCAATCAGCTGACCCATTTTTGAACCTTGAGATG TAAAGTCTCAATCAGCTGACCCATTTTTAAACCTTGAGATG < 41bp 1 0.0364315046941508 1 0.0894494950771332 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIC1 ENSG00000107036 CDS Human protein_coding chr9:5770122 chr9:5770130 synonymous SNV . 0 29 hm5C_associated_SNPs_18363 0 0 3 BUD13 POSTAR2 ENCODE chr9:5770062-5770161
64251 chr9 5770130 5770130 1 + G A CESC 5770123 + 5770103 5770143 41 AAAGTCTCAATCAGCTGACCCATTTTTGAACCTTGAGATGG AAAGTCTCAATCAGCTGACCCATTTTTAAACCTTGAGATGG < 41bp 1 0.0486202270682644 1 0.0460381805896759 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIC1 ENSG00000107036 CDS Human protein_coding chr9:5770123 chr9:5770130 synonymous SNV . 0 28 hm5C_associated_SNPs_18364 0 0 3 BUD13 POSTAR2 ENCODE chr9:5770062-5770161
64251 chr16 50100092 50100092 1 + C T CESC 50100099 + 50100079 50100119 41 CAGTTCTCCCCTACGGGCGACTGTCAGGCCGAGGCGGCTGC CAGTTCTCCCCTATGGGCGACTGTCAGGCCGAGGCGGCTGC < 41bp 1 0.130648719841805 1 0.0910870134830475 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50100099 chr16:50100092 nonsynonymous SNV 0.830 1 14 hm5C_associated_SNPs_18365 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:50100070-50100102
64251 chr17 29560168 29560168 1 + G A CESC 29560175 + 29560155 29560195 41 TGGTCACAATGATGGGTGATCAAGGAGAACTCCCTATAGCG TGGTCACAATGATAGGTGATCAAGGAGAACTCCCTATAGCG < 41bp 1 0.422526339685826 1 0.720620930194855 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29560175 chr17:29560168 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_18366 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:29560145-29560181
64251 chr20 47895230 47895230 1 + G C CESC 47895210 + 47895190 47895230 41 GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGG GCGGTGCCCGGAGTGTGGTACTTCTCCTAGTTGCAGTCAGC < 41bp 1 0.0683908598591912 1 0.078784167766571 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895210 chr20:47895230 . . 0 41 hm5C_associated_SNPs_18367 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr20:47895180-47895240
64251 chr22 21288098 21288098 1 + G T CESC 21288090 + 21288070 21288110 41 TCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGC TCCAAGCCCACCAATGGGATCTGTCTCATCACCCAACCTGC < 41bp 1 0.0894185746841775 1 0.124532461166382 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21288090 chr22:21288098 nonsynonymous SNV 0.999 0 29 hm5C_associated_SNPs_18369 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:21288073-21288107
64251 chr22 21288098 21288098 1 + G T CESC 21288099 + 21288079 21288119 41 ACCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAGCAG ACCAATGGGATCTGTCTCATCACCCAACCTGCCTACAGCAG < 41bp 1 0.432860255264113 1 0.347251534461975 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21288099 chr22:21288098 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_18370 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:21288073-21288107
64251 chr6 32134501 32134501 1 + G A CESC 32134481 + 32134461 32134501 41 CGGGCGCTGTGTTCCAGGACCATGTACCGCGTTATGTGGCG CGGGCGCTGTGTTCCAGGACCATGTACCGCGTTATGTGGCA < 41bp 1 0.175395129475891 1 0.145566076040268 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134481 chr6:32134501 nonsynonymous SNV 0.977 3 41 hm5C_associated_SNPs_18373 0 0 2 EFTUD2 POSTAR2 ENCODE chr6:32134490-32134518
64251 chr3 186503991 186503991 1 + G T CESC 186504005 + 186503985 186504025 41 GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATCAAAT GAAGCATATGAAATGTTGAGCCGTGGTTTTAAGGATCAAAT < 41bp 1 0.126999622749416 1 0.107707589864731 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504005 chr3:186503991 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_18374 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:186503960-186504000
64251 chr5 74069855 74069855 1 + C A CESC 74069862 + 74069842 74069882 41 GAGCGAATTGGGCCTTGTGACACAAGGAGGCAAAGTTATTT GAGCGAATTGGGCATTGTGACACAAGGAGGCAAAGTTATTT < 41bp 1 0.753328104395987 1 0.205172091722488 experiment 0.493343791208026 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069862 chr5:74069855 nonsynonymous SNV 0.997 1 14 hm5C_associated_SNPs_18376 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:74069827-74069855
64251 chr1 109350120 109350120 1 + C T CESC 109350104 + 109350084 109350124 41 GTTTTTGTAATTGGAGGGATCACATACTCTGAAGTGCGTTG GTTTTTGTAATTGGAGGGATCACATACTCTGAAGTGTGTTG < 41bp 1 0.419538296848243 1 0.104000210762024 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109350104 chr1:109350120 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_18378 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:109350075-109350130
64251 chr19 59059435 59059435 1 + G A CESC 59059447 + 59059427 59059467 41 CCTGGAGCGGCAGCACTGGACCATGACCAAGATCCAGAAGC CCTGGAGCAGCAGCACTGGACCATGACCAAGATCCAGAAGC < 41bp 1 0.158315637994978 1 0.0413950681686401 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059447 chr19:59059435 nonsynonymous SNV 0.992 1 9 hm5C_associated_SNPs_18380 0 0 26 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59059405-59059479
64251 chr19 59059435 59059435 1 + G A CESC 59059448 + 59059428 59059468 41 CTGGAGCGGCAGCACTGGACCATGACCAAGATCCAGAAGCA CTGGAGCAGCAGCACTGGACCATGACCAAGATCCAGAAGCA < 41bp 1 0.587944566698511 1 0.21021381020546 experiment 0.824110866602977 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059448 chr19:59059435 nonsynonymous SNV 0.992 1 8 hm5C_associated_SNPs_18381 0 0 26 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59059405-59059479
64251 chr2 233681711 233681711 1 + G A CESC 233681710 + 233681690 233681730 41 AGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAACTTGCC AGGAAGAAGAAAGGAAAAGGCAAGAGGAAGAAGAACTTGCC < 41bp 1 0.777007028995206 1 0.759839475154877 experiment 0.445985942009588 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681710 chr2:233681711 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_18389 0 0 16 BUD13 POSTAR2 ENCODE chr2:233681695-233681746
64251 chr2 233681711 233681711 1 + G A CESC 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCAAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA < 41bp 1 0.131491962666504 1 0.177417516708374 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681711 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_18390 0 0 16 BUD13 POSTAR2 ENCODE chr2:233681695-233681746
64251 chr2 233681711 233681711 1 + G A CESC 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CAAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT < 41bp 1 0.438647620898232 1 0.494018405675888 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681711 nonsynonymous SNV 0.998 2 2 hm5C_associated_SNPs_18391 0 0 16 BUD13 POSTAR2 ENCODE chr2:233681695-233681746
64251 chr8 21957333 21957333 1 + G A CESC 21957337 + 21957317 21957357 41 CACAGACCGGCAGCCTGAAGCCCCCGGGGACAACCCCCACA CACAGACCGGCAGCCTAAAGCCCCCGGGGACAACCCCCACA < 41bp 1 0.323976218174218 1 0.12311577796936 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21957337 chr8:21957333 nonsynonymous SNV 0.007 2 17 hm5C_associated_SNPs_18392 0 0 2 DDX24 POSTAR2 ENCODE chr8:21957289-21957345
64251 chr11 61503241 61503241 1 + G C CESC 61503225 + 61503205 61503245 41 CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTGAGCG CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTCAGCG < 41bp 1 0.246299693385645 1 0.0673165023326874 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503225 chr11:61503241 nonsynonymous SNV 0.997 4 37 hm5C_associated_SNPs_18393 0 0 1 BUD13 POSTAR2 ENCODE chr11:61503232-61503284
64251 chr12 49725173 49725173 1 + G C CESC 49725165 + 49725145 49725185 41 CTGCACCAACCCTGTGGCTACATTACTCGAATGGCAGGATG CTGCACCAACCCTGTGGCTACATTACTCCAATGGCAGGATG < 41bp 1 0.242458431594673 1 0.055341511964798 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TROAP ENSG00000135451 CDS Human protein_coding chr12:49725165 chr12:49725173 nonsynonymous SNV 0.820 3 29 hm5C_associated_SNPs_18394 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:49725161-49725185
64251 chr11 66610676 66610676 1 + G A CESC 66610663 + 66610643 66610683 41 GTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCT GTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAAAGTGGCT < 41bp 1 0.596481385656835 1 0.865642786026001 experiment 0.807037228686331 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66610663 chr11:66610676 nonsynonymous SNV 0.970 2 34 hm5C_associated_SNPs_18396 0 0 2 LSM11 POSTAR2 ENCODE chr11:66610651-66610742
64251 chr9 110086276 110086276 1 + G A CESC 110086266 + 110086246 110086286 41 TGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCT TGCTTCCAGCGTTACTACAGCAGATAGGTCAAGAGAATCCT < 41bp 1 0.267593218169053 1 0.157477259635925 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110086266 chr9:110086276 nonsynonymous SNV 0.996 3 31 hm5C_associated_SNPs_18397 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:110086219-110086278
64251 chr19 54967167 54967167 1 + T C CESC 54967152 + 54967132 54967172 41 TGCTGTATTCTCAGGCTGACCCGGGAGCCTGTGGCTGAGAG TGCTGTATTCTCAGGCTGACCCGGGAGCCTGTGGCCGAGAG < 41bp 1 0.565573208252725 1 0.803675651550293 experiment 0.868853583494551 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967152 chr19:54967167 synonymous SNV . 0 36 hm5C_associated_SNPs_18400 0 0 23 FMR1 POSTAR2 GSE39682,GSM977616 chr19:54967149-54967170
64251 chr17 4859382 4859382 1 + C T CESC 4859363 + 4859343 4859383 41 CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGTA < 41bp 1 0.176514666336323 1 0.0893726050853729 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859363 chr17:4859382 synonymous SNV . 0 40 hm5C_associated_SNPs_18405 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859364 + 4859344 4859384 41 CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGTAA < 41bp 1 0.236664883960922 1 0.294217258691788 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859364 chr17:4859382 synonymous SNV . 0 39 hm5C_associated_SNPs_18406 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCAGGCCGTTGAGAAGAAGGCCTGTAACTGTCTGCTGCTGA < 41bp 1 0.194430405581885 1 0.0749082863330841 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859382 synonymous SNV . 0 25 hm5C_associated_SNPs_18407 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CAGGCCGTTGAGAAGAAGGCCTGTAACTGTCTGCTGCTGAA < 41bp 1 0.521347311179819 1 0.0727366209030151 experiment 0.957305377640362 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859382 synonymous SNV . 0 24 hm5C_associated_SNPs_18408 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859385 + 4859365 4859405 41 GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA GTTGAGAAGAAGGCCTGTAACTGTCTGCTGCTGAAGGTCAA < 41bp 1 0.571238223876254 1 0.1211818754673 experiment 0.857523552247492 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859385 chr17:4859382 synonymous SNV . 0 18 hm5C_associated_SNPs_18409 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859389 + 4859369 4859409 41 AGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAG AGAAGAAGGCCTGTAACTGTCTGCTGCTGAAGGTCAACCAG < 41bp 1 0.77641711029583 1 0.525823533535004 experiment 0.447165779408341 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859389 chr17:4859382 synonymous SNV . 0 14 hm5C_associated_SNPs_18410 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859382 4859382 1 + C T CESC 4859392 + 4859372 4859412 41 AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATC AGAAGGCCTGTAACTGTCTGCTGCTGAAGGTCAACCAGATC < 41bp 1 0.418416555325616 1 0.276124775409698 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859392 chr17:4859382 synonymous SNV . 0 11 hm5C_associated_SNPs_18411 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr19 18543848 18543848 1 + G A CESC 18543840 + 18543820 18543860 41 GAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG GAACCCCATCGGGCAGGGCGCCGGCAGGACTAATGTGAGTG < 41bp 1 0.146451934230158 1 0.340990543365479 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543840 chr19:18543848 nonsynonymous SNV 0.993 0 29 hm5C_associated_SNPs_18413 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 18543848 18543848 1 + G A CESC 18543841 + 18543821 18543861 41 AACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG AACCCCATCGGGCAGGGCGCCGGCAGGACTAATGTGAGTGG < 41bp 1 0.654731705783085 1 0.517574191093445 experiment 0.69053658843383 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543841 chr19:18543848 nonsynonymous SNV 0.993 0 28 hm5C_associated_SNPs_18414 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chrX 73044134 73044134 1 - C G CESC 73044128 - 73044108 73044148 41 AAGTAGGAAAATTTGAATAACAATGATTATCTTTTGAATAC AAGTAGGAAAATTTCAATAACAATGATTATCTTTTGAATAC < 41bp 1 0.0999071170829268 1 0.0863818228244781 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044128 chrX:73044134 . . 0 15 hm5C_associated_SNPs_18415 0 0 54 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr2 15732065 15732065 1 + C T CESC 15732066 + 15732046 15732086 41 GACGGGGTGAAGATGGCGGCCTTCTCCGGTGCGTTTGTGGA GACGGGGTGAAGATGGCGGTCTTCTCCGGTGCGTTTGTGGA < 41bp 1 0.362775406120684 1 0.0958719253540039 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15732066 chr2:15732065 nonsynonymous SNV 0.994 1 20 hm5C_associated_SNPs_18418 0 0 12 BUD13 POSTAR2 ENCODE chr2:15732043-15732073
64251 chr19 10794119 10794119 1 + C A CESC 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCACTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG < 41bp 1 0.409855147276691 1 0.081492006778717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794119 synonymous SNV . 0 4 hm5C_associated_SNPs_18419 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr17 41570257 41570257 1 + C T CESC 41570239 + 41570219 41570259 41 GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGG GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACTGG < 41bp 1 0.426543674515076 1 0.653341472148895 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570239 chr17:41570257 nonsynonymous SNV 0.997 2 39 hm5C_associated_SNPs_18420 0 0 4 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr17 41570257 41570257 1 + C T CESC 41570240 + 41570220 41570260 41 GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGG GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACTGGG < 41bp 1 0.314816644347521 1 0.782279014587402 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570240 chr17:41570257 nonsynonymous SNV 0.997 2 38 hm5C_associated_SNPs_18421 0 0 4 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr8 28574279 28574279 1 + G A CESC 28574271 + 28574251 28574291 41 CGTTTATGTTACAGAAAATGCAGACATCGCCTGCCTTTACG CGTTTATGTTACAGAAAATGCAGACATCACCTGCCTTTACG < 41bp 1 0.200264928211495 1 0.117244720458984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574271 chr8:28574279 nonsynonymous SNV 0.979 5 29 hm5C_associated_SNPs_18422 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574273-28574291
64251 chr19 50385612 50385612 1 + G A CESC 50385593 + 50385573 50385613 41 GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGC GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCAC < 41bp 1 0.324008352643668 1 0.205682158470154 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385593 chr19:50385612 synonymous SNV . 0 40 hm5C_associated_SNPs_18424 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50385612 50385612 1 + G A CESC 50385594 + 50385574 50385614 41 CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCACC < 41bp 1 0.501905916850749 1 0.313504159450531 experiment 0.996188166298501 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385594 chr19:50385612 synonymous SNV . 0 39 hm5C_associated_SNPs_18425 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr6 158492661 158492661 1 + G A CESC 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG AGCCATCGACACAGTGAAGACAGGCATGGGGGGCAAGGCGG < 41bp 1 0.670613600588044 1 0.494505107402802 experiment 0.658772798823912 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492661 synonymous SNV . 0 22 hm5C_associated_SNPs_18429 0 0 5 BUD13 POSTAR2 ENCODE chr6:158492660-158492788
64251 chr11 66249801 66249801 1 + G A CESC 66249791 + 66249771 66249811 41 GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGC GCCTACCACCTGTCCCGTGCCGCCTGGTACAGAGGCCTGGC < 41bp 1 0.58204068223723 1 0.113652795553207 experiment 0.83591863552554 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249791 chr11:66249801 nonsynonymous SNV 0.976 4 31 hm5C_associated_SNPs_18430 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249801 66249801 1 + G A CESC 66249793 + 66249773 66249813 41 CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTG CTACCACCTGTCCCGTGCCGCCTGGTACAGAGGCCTGGCTG < 41bp 1 0.345729077753234 1 0.0569170713424683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249793 chr11:66249801 nonsynonymous SNV 0.976 4 29 hm5C_associated_SNPs_18431 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249801 66249801 1 + G A CESC 66249794 + 66249774 66249814 41 TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTGT TACCACCTGTCCCGTGCCGCCTGGTACAGAGGCCTGGCTGT < 41bp 1 0.677463127578248 1 0.480325281620026 experiment 0.645073744843504 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249794 chr11:66249801 nonsynonymous SNV 0.976 4 28 hm5C_associated_SNPs_18432 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr19 30498497 30498497 1 + G A CESC 30498487 + 30498467 30498507 41 ATTTGCTAGCTGATAAAGAACTGTGGGCTCGACTTGAAGAA ATTTGCTAGCTGATAAAGAACTGTGGGCTCAACTTGAAGAA < 41bp 1 0.700616818211632 1 0.0387716591358185 experiment 0.598766363576736 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30498487 chr19:30498497 nonsynonymous SNV 0.997 3 31 hm5C_associated_SNPs_18433 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:30498478-30498502
64251 chr18 9182466 9182466 1 + T C CESC 9182456 + 9182436 9182476 41 CAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTG CAAATCTGGGTTCACAAAACCAATTCAGAGCGAAAATTCTG < 41bp 1 0.104936230976451 1 0.0529138147830963 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9182456 chr18:9182466 synonymous SNV . 0 31 hm5C_associated_SNPs_18434 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:9182451-9182484
64251 chr3 126725011 126725011 1 + G A CESC 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTCGTCTTCTACAACTGCAGCATCCACCAGTC < 41bp 1 0.292447749092541 1 0.202575534582138 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126725011 nonsynonymous SNV 0.997 1 31 hm5C_associated_SNPs_18435 0 0 2 DDX24 POSTAR2 ENCODE chr3:126724971-126725027
64251 chr6 44107311 44107311 1 + T A CESC 44107298 + 44107278 44107318 41 TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCAACGTGCTG < 41bp 1 0.297911270592636 1 0.100626140832901 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107298 chr6:44107311 nonsynonymous SNV 0.999 2 34 hm5C_associated_SNPs_18436 0 0 2 PPIG POSTAR2 ENCODE chr6:44107310-44107344
64251 chrX 100088436 100088436 1 + C T CESC 100088446 + 100088426 100088466 41 AACATGGGGGCGGTTGTCCCCCAGGGATCCAGACAGGTATG AACATGGGGGTGGTTGTCCCCCAGGGATCCAGACAGGTATG < 41bp 1 0.625748899461036 1 0.59055894613266 experiment 0.748502201077927 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088446 chrX:100088436 nonsynonymous SNV 0.876 4 11 hm5C_associated_SNPs_18437 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:100088426-100088457
64251 chr17 3629160 3629160 1 + G A CESC 3629168 + 3629148 3629188 41 AGGCATCACTGCGCTTTGAGCACCGAGACTTACACTGGGGG AGGCATCACTGCACTTTGAGCACCGAGACTTACACTGGGGG < 41bp 1 0.365877254881838 1 0.295481473207474 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HASPIN ENSG00000177602 CDS Human protein_coding chr17:3629168 chr17:3629160 nonsynonymous SNV 0.991 0 13 hm5C_associated_SNPs_18438 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:3629160-3629180
64251 chr16 697471 697471 1 + G A CESC 697463 + 697443 697483 41 GTGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC GTGTGAATGGCCGGCGGGCCCCCTCCACATCCCCATCCTTC < 41bp 1 0.122825456358706 1 0.0469447076320648 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697463 chr16:697471 synonymous SNV . 0 29 hm5C_associated_SNPs_18439 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:697447-697484
64251 chr20 3804636 3804636 1 + C T CESC 3804653 + 3804633 3804673 41 TTCCGCCTGGCAGCAGAGAACCCTTTCCAGGAGCCACGGAC TTCTGCCTGGCAGCAGAGAACCCTTTCCAGGAGCCACGGAC < 41bp 1 0.168007140854972 1 0.0462908446788788 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3804653 chr20:3804636 nonsynonymous SNV 0.632 2 4 hm5C_associated_SNPs_18441 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3804630-3804662
64251 chr7 143080071 143080071 1 + C T CESC 143080053 + 143080033 143080073 41 CTCCGGCTCAGAGCCAGACACAGTTCCATGTTCAGCCCCAG CTCCGGCTCAGAGCCAGACACAGTTCCATGTTCAGCCCTAG < 41bp 1 0.292815458101433 1 0.253543317317963 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZYX ENSG00000159840 CDS Human protein_coding chr7:143080053 chr7:143080071 stopgain 0.548 0 39 hm5C_associated_SNPs_18442 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:143080060-143080080
64251 chr1 114483792 114483792 1 + C G CESC 114483796 + 114483776 114483816 41 CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGT CTTTCAGCATAAGAATGACACCTGCCTTGTTTTTGAAATGT < 41bp 1 0.025170440862522 1 0.136122703552246 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483796 chr1:114483792 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_18443 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:114483785-114483832
64251 chr6 31929372 31929372 1 + C G CESC 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCTGAGGAGCAGTGGGCCATCCCTGTGGAC < 41bp 1 0.27195059529408 1 0.512403666973114 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929372 stopgain 0.904 0 15 hm5C_associated_SNPs_18444 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr16 27374353 27374353 1 + G C CESC 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCCTCCACCATGGGGCAGCTGCAGCC < 41bp 1 0.655769719856213 1 0.693694293498993 experiment 0.688460560287575 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374353 nonsynonymous SNV 0.175 3 23 hm5C_associated_SNPs_18445 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr5 74865228 74865228 1 + G A CESC 74865247 + 74865227 74865267 41 TGACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACA TAACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACA < 41bp 1 0.708830518087202 1 0.204555988311768 experiment 0.582338963825596 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLK ENSG00000122008 CDS Human protein_coding chr5:74865247 chr5:74865228 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_18446 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:74865176-74865230
64251 chr6 47577036 47577036 1 + C G CESC 47577024 + 47577004 47577044 41 TGTTGTGCATTGTAGAAGCACTGAAAAAGGATCACGGGTAA TGTTGTGCATTGTAGAAGCACTGAAAAAGGATGACGGGTAA < 41bp 1 0.656221846364972 1 0.470941424369812 experiment 0.687556307270057 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577024 chr6:47577036 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_18449 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr19 58797541 58797541 1 + G T CESC 58797552 + 58797532 58797572 41 TGGGTGGCTGAGAGAGGAACCACCCAGGGCTGCCATCCAGG TGGGTGGCTTAGAGAGGAACCACCCAGGGCTGCCATCCAGG < 41bp 1 0.394676918471062 1 0.131765216588974 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58797552 chr19:58797541 stopgain 0.282 0 10 hm5C_associated_SNPs_18452 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58797499-58797544
64251 chr10 7842008 7842008 1 + G A CESC 7841992 + 7841972 7842012 41 TGTTTTTGTCAATTCTAGGTCTGTCATCTCCTATAAGACAG TGTTTTTGTCAATTCTAGGTCTGTCATCTCCTATAAAACAG < 41bp 1 0.1602396863809 1 0.0632224678993225 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841992 chr10:7842008 synonymous SNV . 0 37 hm5C_associated_SNPs_18454 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842008 7842008 1 + G A CESC 7841996 + 7841976 7842016 41 TTTGTCAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGA TTTGTCAATTCTAGGTCTGTCATCTCCTATAAAACAGAAGA < 41bp 1 0.120393896538241 1 0.139369934797287 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841996 chr10:7842008 synonymous SNV . 0 33 hm5C_associated_SNPs_18455 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842008 7842008 1 + G A CESC 7841999 + 7841979 7842019 41 GTCAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAA GTCAATTCTAGGTCTGTCATCTCCTATAAAACAGAAGAAAA < 41bp 1 0.478634712840553 1 0.530000448226929 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841999 chr10:7842008 synonymous SNV . 0 30 hm5C_associated_SNPs_18456 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842008 7842008 1 + G A CESC 7842001 + 7841981 7842021 41 CAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAAGC CAATTCTAGGTCTGTCATCTCCTATAAAACAGAAGAAAAGC < 41bp 1 0.0594302817167897 1 0.53423011302948 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7842001 chr10:7842008 synonymous SNV . 0 28 hm5C_associated_SNPs_18457 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842008 7842008 1 + G A CESC 7842002 + 7841982 7842022 41 AATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAAGCC AATTCTAGGTCTGTCATCTCCTATAAAACAGAAGAAAAGCC < 41bp 1 0.45343447358909 1 0.597342729568481 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7842002 chr10:7842008 synonymous SNV . 0 27 hm5C_associated_SNPs_18458 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 106014929 106014929 1 + C A CESC 106014932 + 106014912 106014952 41 CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCGGAGGGC CCCCGGCAGGAAGCGCGACCCCGGGGCCGGTCCCGGAGGGC < 41bp 1 0.78933267364099 1 0.909861445426941 experiment 0.42133465271802 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106014932 chr10:106014929 nonsynonymous SNV 0.988 1 18 hm5C_associated_SNPs_18459 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:106014920-106014940
64251 chr19 24010138 24010138 1 + C T CESC 24010154 + 24010134 24010174 41 GCTTCTGCTGGCAGCTCGTGCTATTGTTGCCATTGAAAACC GCTTTTGCTGGCAGCTCGTGCTATTGTTGCCATTGAAAACC < 41bp 1 0.217900463197625 1 0.09791100025177 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPSAP58 ENSG00000205246 CDS Human other chr19:24010154 chr19:24010138 synonymous SNV . 0 5 hm5C_associated_SNPs_18461 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:24010091-24010139
64251 chr16 1703045 1703045 1 + G A CESC 1703054 + 1703034 1703074 41 GCTTGAGTGATGAAGAGGACCAGAAGCCAGTGCGCCTGCCT GCTTGAGTGATAAAGAGGACCAGAAGCCAGTGCGCCTGCCT < 41bp 1 0.536104859915574 1 0.778140962123871 experiment 0.927790280168851 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1703054 chr16:1703045 nonsynonymous SNV 0.965 1 12 hm5C_associated_SNPs_18462 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:1703039-1703072
64251 chr1 201966484 201966484 1 + G C CESC 201966479 + 201966459 201966499 41 CTTCATGCCACCGTCCTTTCCATTTGGAGGAATGGAGAACC CTTCATGCCACCGTCCTTTCCATTTCGAGGAATGGAGAACC < 41bp 1 0.105730764828534 1 0.278356432914734 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966479 chr1:201966484 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_18463 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:201966449-201966484
64251 chr12 109539758 109539758 1 + C T CESC 109539764 + 109539744 109539784 41 GACCTAATCAAGCTCACGGGCTCTGCTTTAGTGTTCAAAGG GACCTAATCAAGCTTACGGGCTCTGCTTTAGTGTTCAAAGG < 41bp 1 0.291546417056016 1 0.194214254617691 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109539764 chr12:109539758 nonsynonymous SNV 0.932 4 15 hm5C_associated_SNPs_18464 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:109539706-109539776
64251 chr3 57898215 57898215 1 + C G CESC 57898199 + 57898179 57898219 41 AGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT AGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGGTCCT < 41bp 1 0.537563655923096 1 0.668926775455475 experiment 0.924872688153808 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898199 chr3:57898215 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_18465 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:57898200-57898220
64251 chr17 43214086 43214086 1 + G A CESC 43214071 + 43214051 43214091 41 GCCCCCAGGGACGCCTGGAACAGTCTGGGCAAGATGAGCAG GCCCCCAGGGACGCCTGGAACAGTCTGGGCAAGATAAGCAG < 41bp 1 0.594486851575515 1 0.326056063175201 experiment 0.811026296848969 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43214071 chr17:43214086 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_18466 0 0 4 BUD13 POSTAR2 ENCODE chr17:43214047-43214142
64251 chr11 399985 399985 1 + C T CESC 399996 + 399976 400016 41 GGAACCTTTCATCCAGCGACCACCTGAAGGACCGCCTGGCC GGAACCTTTTATCCAGCGACCACCTGAAGGACCGCCTGGCC < 41bp 1 0.319764291317348 1 0.279019862413406 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PKP3 ENSG00000184363 CDS Human protein_coding chr11:399996 chr11:399985 nonsynonymous SNV 0.774 3 10 hm5C_associated_SNPs_18467 0 0 3 FXR2 POSTAR2 ENCODE chr11:399984-400030
64251 chr7 55240757 55240757 1 + C T CESC 55240738 + 55240718 55240758 41 CCTCTTGCTGCTGGTGGTGGCCCTGGGGATCGGCCTCTTCA CCTCTTGCTGCTGGTGGTGGCCCTGGGGATCGGCCTCTTTA < 41bp 1 0.260837506322578 1 0.415222316980362 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55240738 chr7:55240757 synonymous SNV . 0 40 hm5C_associated_SNPs_18468 0 0 1 SND1 POSTAR2 ENCODE chr7:55240684-55240818
64251 chr15 40898639 40898639 1 + G A CESC 40898648 + 40898628 40898668 41 GAGGTGGGAATGAAAGAGTTCAGGTAAGTCTTTTGTGCAAA GAGGTGGGAATAAAAGAGTTCAGGTAAGTCTTTTGTGCAAA < 41bp 1 0.508498051757038 1 0.346201479434967 experiment 0.983003896485924 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KNL1 ENSG00000137812 CDS Human protein_coding chr15:40898648 chr15:40898639 nonsynonymous SNV 0.976 2 12 hm5C_associated_SNPs_18470 0 0 1 PRPF8 POSTAR2 ENCODE chr15:40898593-40898678
64251 chr1 231114978 231114978 1 + G C CESC 231114974 + 231114954 231114994 41 ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCGAGACTA ATCGAATGCAACCAGGAGGCCAAACAGTTGTACCGAGACTA < 41bp 1 0.347355912626582 1 0.130229413509369 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARV1 ENSG00000173409 CDS Human protein_coding chr1:231114974 chr1:231114978 nonsynonymous SNV 0.992 3 25 hm5C_associated_SNPs_18471 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:231114958-231114985
64251 chr1 32620245 32620245 1 + G T CESC 32620232 + 32620212 32620252 41 GACAATTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA GACAATTATCGAATGAAGAGCTATAAGAACAATTCTCTAAA < 41bp 1 0.233516119722055 1 0.283635199069977 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620232 chr1:32620245 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_18472 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620245 32620245 1 + G T CESC 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGAGCTATAAGAACAATTCTCTAAACCCTGAAGAAATGA < 41bp 1 0.450655094792346 1 0.280176311731339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620245 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_18473 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620245 32620245 1 + G T CESC 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGAGCTATAAGAACAATTCTCTAAACCCTGAAGAAATGAGA < 41bp 1 0.373939714059137 1 0.260517299175262 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620245 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_18474 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620245 32620245 1 + G T CESC 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATTCTCTAAACCCTGAAGAAATGAGACGAAG < 41bp 1 0.182255059168143 1 0.100959688425064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620245 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_18475 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620245 32620245 1 + G T CESC 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATTCTCTAAACCCTGAAGAAATGAGACGAAGA < 41bp 1 0.212749328280878 1 0.228674471378326 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620245 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_18476 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr5 131977957 131977957 1 + T G CESC 131977975 + 131977955 131977995 41 TCTGAATATGTGGAGAAATTCTACAGGATTAAAAAGAACAT TCGGAATATGTGGAGAAATTCTACAGGATTAAAAAGAACAT < 41bp 1 0.692133810003956 1 0.733688950538635 experiment 0.615732379992088 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131977975 chr5:131977957 synonymous SNV . 0 3 hm5C_associated_SNPs_18477 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131977890-131977996
64251 chr14 102466695 102466695 1 + C T CESC 102466707 + 102466687 102466727 41 AAATCGATCAGATGAAGGAGCAACCCTGGGTTTCAGTACAG AAATCGATTAGATGAAGGAGCAACCCTGGGTTTCAGTACAG < 41bp 1 0.0429918650150708 1 0.209843844175339 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466707 chr14:102466695 stopgain 0.999 1 9 hm5C_associated_SNPs_18478 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466642-102466729
64251 chr16 1793357 1793357 1 + G A CESC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTAAACGTGTTCCCCCTGGCTGACGGCACGGTACG < 41bp 1 0.127841647108522 1 0.231406599283218 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793357 synonymous SNV . 0 9 hm5C_associated_SNPs_18479 0 0 10 DDX24 POSTAR2 ENCODE chr16:1793335-1793371
64251 chr7 127228576 127228576 1 + C G CESC 127228572 + 127228552 127228592 41 CATGGGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCG CATGGGCCTCACCGTGTCCGCGCTGTTTTCGCGGATCTTCG < 41bp 1 0.556335431404536 1 0.0658783614635468 experiment 0.887329137190927 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228572 chr7:127228576 synonymous SNV . 0 25 hm5C_associated_SNPs_18480 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr7 127228576 127228576 1 + C G CESC 127228574 + 127228554 127228594 41 TGGGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCGGG TGGGCCTCACCGTGTCCGCGCTGTTTTCGCGGATCTTCGGG < 41bp 1 0.429596600984122 1 0.0720932185649872 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228574 chr7:127228576 synonymous SNV . 0 23 hm5C_associated_SNPs_18481 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr6 52288785 52288785 1 + C A CESC 52288769 + 52288749 52288789 41 AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAACGGCT AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAAAGGCT < 41bp 1 0.239432906630563 1 0.430997788906097 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52288769 chr6:52288785 nonsynonymous SNV 0.988 2 37 hm5C_associated_SNPs_18482 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:52288765-52288786
64251 chr19 36223347 36223347 1 + C T CESC 36223344 + 36223324 36223364 41 GGCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCTGAAG GGCTCCCCCTGGCCCGGCCCCATTTCCACCACCCCCTGAAG < 41bp 1 0.0187555299518411 1 0.0727880895137787 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36223344 chr19:36223347 nonsynonymous SNV 0.484 4 24 hm5C_associated_SNPs_18483 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:36223340-36223360
64251 chr22 38201771 38201771 1 + C T CESC 38201755 + 38201735 38201775 41 GAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGCGCCT GAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGTGCCT < 41bp 1 0.480178628491222 1 0.189383178949356 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201755 chr22:38201771 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_18485 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:38201725-38201776
64251 chr4 79440596 79440596 1 + G C CESC 79440588 + 79440568 79440608 41 GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCT GGCCTCCTTGGAGCACCACACCGAGATGCAGTTTTCTTTCT < 41bp 1 0.168293000408418 1 0.563862919807434 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440588 chr4:79440596 nonsynonymous SNV 0.999 3 29 hm5C_associated_SNPs_18486 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 79440596 79440596 1 + G C CESC 79440589 + 79440569 79440609 41 GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCTT GCCTCCTTGGAGCACCACACCGAGATGCAGTTTTCTTTCTT < 41bp 1 0.438733827817335 1 0.671028017997742 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440589 chr4:79440596 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_18487 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr1 36754830 36754830 1 + C T CESC 36754839 + 36754819 36754859 41 AGAAGCCTTTTCGGGGCAGTCAGTCTCCCAAAAGGTATAAG AGAAGCCTTTTTGGGGCAGTCAGTCTCCCAAAAGGTATAAG < 41bp 1 0.190930355934259 1 0.306629478931427 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36754839 chr1:36754830 nonsynonymous SNV 0.997 4 12 hm5C_associated_SNPs_18488 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:36754800-36754840
64251 chr11 46895142 46895142 1 - C T CESC 46895143 - 46895123 46895163 41 ACACTGGGCTCTCCCCAAGGCGAGCAGACCTGAACGGCAGC ACACTGGGCTCTCCCCAAGGCAAGCAGACCTGAACGGCAGC < 41bp 1 0.167447506917791 1 0.347202301025391 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP4 ENSG00000134569 CDS Human protein_coding chr11:46895143 chr11:46895142 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_18489 0 0 3 BUD13 POSTAR2 ENCODE chr11:46895142-46895192
64251 chr19 38572458 38572458 1 + G A CESC 38572456 + 38572436 38572476 41 GGGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGG GGGCGTGCGCGCAAGGGTGGCCAACTGGCCGCCCAAGCGGG < 41bp 1 0.033269837745625 1 0.166410058736801 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572456 chr19:38572458 nonsynonymous SNV 0.961 4 23 hm5C_associated_SNPs_18490 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572457 + 38572437 38572477 41 GGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGA GGCGTGCGCGCAAGGGTGGCCAACTGGCCGCCCAAGCGGGA < 41bp 1 0.164037033027761 1 0.431804627180099 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572457 chr19:38572458 nonsynonymous SNV 0.961 4 22 hm5C_associated_SNPs_18491 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572464 + 38572444 38572484 41 GCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTG GCGCAAGGGTGGCCAACTGGCCGCCCAAGCGGGAGGCCCTG < 41bp 1 0.141607905695636 1 0.137637227773666 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572464 chr19:38572458 nonsynonymous SNV 0.961 4 15 hm5C_associated_SNPs_18492 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572465 + 38572445 38572485 41 CGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGA CGCAAGGGTGGCCAACTGGCCGCCCAAGCGGGAGGCCCTGA < 41bp 1 0.175940363033235 1 0.180600017309189 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572465 chr19:38572458 nonsynonymous SNV 0.961 4 14 hm5C_associated_SNPs_18493 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572467 + 38572447 38572487 41 CAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGA CAAGGGTGGCCAACTGGCCGCCCAAGCGGGAGGCCCTGAGA < 41bp 1 0.159302186882258 1 0.356692612171173 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572467 chr19:38572458 nonsynonymous SNV 0.961 4 12 hm5C_associated_SNPs_18494 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572468 + 38572448 38572488 41 AAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGAG AAGGGTGGCCAACTGGCCGCCCAAGCGGGAGGCCCTGAGAG < 41bp 1 0.065726687110648 1 0.619363784790039 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572468 chr19:38572458 nonsynonymous SNV 0.961 4 11 hm5C_associated_SNPs_18495 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 38572458 38572458 1 + G A CESC 38572469 + 38572449 38572489 41 AGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGAGA AGGGTGGCCAACTGGCCGCCCAAGCGGGAGGCCCTGAGAGA < 41bp 1 0.176429699635916 1 0.50865250825882 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572469 chr19:38572458 nonsynonymous SNV 0.961 4 10 hm5C_associated_SNPs_18496 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:38572458-38572459
64251 chr19 3434290 3434290 1 + G A CESC 3434306 + 3434286 3434326 41 ACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG ACTGAAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG < 41bp 1 0.381550454210911 1 0.880393624305725 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFIC ENSG00000141905 CDS Human protein_coding chr19:3434306 chr19:3434290 nonsynonymous SNV 0.995 4 5 hm5C_associated_SNPs_18497 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:3434280-3434300
64251 chr16 15788044 15788044 1 + G A CESC 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGGGGAACCCCCCTCACACCTGCGGCCCG < 41bp 1 0.25535243024024 1 0.197886824607849 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788044 synonymous SNV . 0 18 hm5C_associated_SNPs_18500 1 0 3 DDX24 POSTAR2 ENCODE chr16:15788032-15788113
64251 chr20 61574475 61574475 1 + G C CESC 61574466 + 61574446 61574486 41 AAAGGTCAGATTCAGGAGGCCATCGCCTTGATCAACAGCCT AAAGGTCAGATTCAGGAGGCCATCGCCTTCATCAACAGCCT < 41bp 1 0.201437654215425 1 0.0525189638137817 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GID8 ENSG00000101193 CDS Human protein_coding chr20:61574466 chr20:61574475 nonsynonymous SNV 0.569 4 30 hm5C_associated_SNPs_18501 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:61574408-61574475
64251 chr11 111948979 111948979 1 + A C CESC 111948975 + 111948955 111948995 41 ATATGTGGAAAATAAGAGAACTGGAAAAACAGATGGAAGAT ATATGTGGAAAATAAGAGAACTGGCAAAACAGATGGAAGAT < 41bp 1 0.446301977135986 1 0.264638245105743 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C11orf57 ENSG00000150776 CDS Human protein_coding chr11:111948975 chr11:111948979 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_18502 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:111948953-111948990
64251 chr15 52188684 52188684 1 + C T CESC 52188695 + 52188675 52188715 41 GAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTG GAAATGTTTTAGTCTTGCAGCCACCCGGAGCAATGACCCTG < 41bp 1 0.0901589625523675 1 0.0531454980373383 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMOD3 ENSG00000138594 CDS Human protein_coding chr15:52188695 chr15:52188684 synonymous SNV . 0 10 hm5C_associated_SNPs_18503 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:52188664-52188685
64251 chr2 227729838 227729838 1 + C G CESC 227729840 + 227729820 227729860 41 GAGCTGTGCTGTAGGTTTCTCAGGTAAGGGAGACAAAATTT GAGCTGTGCTGTAGGTTTGTCAGGTAAGGGAGACAAAATTT < 41bp 1 0.670820479051039 1 0.487635403871536 experiment 0.658359041897921 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RHBDD1 ENSG00000144468 CDS Human protein_coding chr2:227729840 chr2:227729838 nonsynonymous SNV 0.994 4 19 hm5C_associated_SNPs_18505 0 0 1 BUD13 POSTAR2 ENCODE chr2:227729737-227729848
64251 chr1 182827319 182827319 1 + C T CESC 182827338 + 182827318 182827358 41 CCATCTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA CTATCTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA < 41bp 1 0.190158391359216 1 0.176957339048386 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827338 chr1:182827319 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_18506 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:182827229-182827319
64251 chr5 177565208 177565208 1 + G C CESC 177565214 + 177565194 177565234 41 GTGAGCGGAGCCTGGAGGAGCTGCTGCACTACGTGGGCCAG GTGAGCGGAGCCTGCAGGAGCTGCTGCACTACGTGGGCCAG < 41bp 1 0.69271741081808 1 0.211882799863815 experiment 0.61456517836384 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5B ENSG00000145916 CDS Human protein_coding chr5:177565214 chr5:177565208 nonsynonymous SNV 0.997 1 15 hm5C_associated_SNPs_18507 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:177565180-177565218
64251 chr8 22037970 22037970 1 + C T CESC 22037952 + 22037932 22037972 41 ACCCCAATGGCTACTCTGCTCACATGCACTGCGTGTGGCGC ACCCCAATGGCTACTCTGCTCACATGCACTGCGTGTGGTGC < 41bp 1 0.357374364209623 1 0.0936912596225739 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22037952 chr8:22037970 nonsynonymous SNV 0.993 3 39 hm5C_associated_SNPs_18508 0 0 1 DDX24 POSTAR2 ENCODE chr8:22037968-22037994
64251 chr19 50733876 50733876 1 + C G CESC 50733861 + 50733841 50733881 41 TTCTACCAGCTGCTGGGGGGCGCTGGAGAGCAGCTCAAAGG TTCTACCAGCTGCTGGGGGGCGCTGGAGAGCAGCTGAAAGG < 41bp 1 0.268221298450225 1 0.475104451179504 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50733861 chr19:50733876 synonymous SNV . 0 36 hm5C_associated_SNPs_18510 0 0 1 PRPF8 POSTAR2 ENCODE chr19:50733861-50733917
64251 chr7 75933350 75933350 1 + G A CESC 75933337 + 75933317 75933357 41 GACCCCACCCAAGTTTCCTCCTCCCTGTCCCCTGAGGGCAC GACCCCACCCAAGTTTCCTCCTCCCTGTCCCCTAAGGGCAC < 41bp 1 0.434346053238089 1 0.714993238449097 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933337 chr7:75933350 nonsynonymous SNV 0.998 3 34 hm5C_associated_SNPs_18511 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75933329-75933376
64251 chr10 102684014 102684014 1 + C G CESC 102684010 + 102683990 102684030 41 ATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGAC ATTCTGGCAATTCTGGCCACCATTGTACCAGGAATAGTGAC < 41bp 1 0.0943950165495862 1 0.123559772968292 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684010 chr10:102684014 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_18512 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:102684000-102684020
64251 chr10 102684014 102684014 1 + C G CESC 102684031 + 102684011 102684051 41 ATTCTACCAGGAATAGTGACCAAATCCAAGTGGCAGGTACC ATTGTACCAGGAATAGTGACCAAATCCAAGTGGCAGGTACC < 41bp 1 0.108879669766345 1 0.419168919324875 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684031 chr10:102684014 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_18513 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:102684000-102684020
64251 chr1 6680012 6680012 1 + C G CESC 6679994 + 6679974 6680014 41 GTCTCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTCTT GTCTCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTGTT < 41bp 1 0.167574969922677 1 0.120843559503555 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679994 chr1:6680012 synonymous SNV . 0 39 hm5C_associated_SNPs_18514 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:6679993-6680017
64251 chr1 6680012 6680012 1 + C G CESC 6679997 + 6679977 6680017 41 TCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTCTTGCA TCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTGTTGCA < 41bp 1 0.081866430248238 1 0.0918152928352356 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679997 chr1:6680012 synonymous SNV . 0 36 hm5C_associated_SNPs_18515 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:6679993-6680017
64251 chr5 102262314 102262314 1 + G A CESC 102262299 + 102262279 102262319 41 AAATCTTTAGGTGTTGGATTCAGAGTTGGAGGAGAGACTGG AAATCTTTAGGTGTTGGATTCAGAGTTGGAGGAGAAACTGG < 41bp 1 0.345233132854403 1 0.945936799049377 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAM ENSG00000145730 CDS Human protein_coding chr5:102262299 chr5:102262314 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_18516 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr5:102262298-102262330
64251 chr14 61201641 61201641 1 + C T CESC 61201633 + 61201613 61201653 41 CACCAAATATCGGAACCCCTCCTTGAAGCTGATGGTGAATG CACCAAATATCGGAACCCCTCCTTGAAGTTGATGGTGAATG < 41bp 1 0.121693707495096 1 0.158790409564972 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61201633 chr14:61201641 synonymous SNV . 0 29 hm5C_associated_SNPs_18518 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:61201607-61201656
64251 chr15 83502192 83502192 1 + G C CESC 83502180 + 83502160 83502200 41 CCAACCAGCAACAGACGCACCAGTGACCTTGAGAGGAGCAT CCAACCAGCAACAGACGCACCAGTGACCTTGACAGGAGCAT < 41bp 1 0.250822946984932 1 0.322668552398682 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control WHAMM ENSG00000156232 CDS Human protein_coding chr15:83502180 chr15:83502192 nonsynonymous SNV 0.561 4 33 hm5C_associated_SNPs_18520 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:83502169-83502199
64251 chr10 70506953 70506953 1 + G A CESC 70506935 + 70506915 70506955 41 CAGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAG CAGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAAAG < 41bp 1 0.133947024210604 1 0.219482392072678 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506935 chr10:70506953 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_18521 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506953 70506953 1 + G A CESC 70506936 + 70506916 70506956 41 AGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGT AGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAAAGT < 41bp 1 0.168747511264222 1 0.127678543329239 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506936 chr10:70506953 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_18522 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506953 70506953 1 + G A CESC 70506937 + 70506917 70506957 41 GTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGTA GTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAAAGTA < 41bp 1 0.520189509124176 1 0.278316110372543 experiment 0.959620981751648 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506937 chr10:70506953 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_18523 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506953 70506953 1 + G A CESC 70506938 + 70506918 70506958 41 TGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGTAT TGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAAAGTAT < 41bp 1 0.373345607275869 1 0.307306945323944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506938 chr10:70506953 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_18524 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr19 7584342 7584342 1 + G T CESC 7584339 + 7584319 7584359 41 TGGAGCCCGTCTCGGAGGATCTGGACCCCGACGCCGAAGCT TGGAGCCCGTCTCGGAGGATCTGTACCCCGACGCCGAAGCT < 41bp 1 0.485673999886616 1 0.541741013526917 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584339 chr19:7584342 nonsynonymous SNV 0.286 2 24 hm5C_associated_SNPs_18527 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584315-7584348
64251 chr12 57919335 57919335 1 + C G CESC 57919351 + 57919331 57919371 41 CCTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGG CCTTGTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGG < 41bp 1 0.27663285795085 1 0.357176423072815 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919351 chr12:57919335 nonsynonymous SNV 0.001 1 5 hm5C_associated_SNPs_18528 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919276-57919343
64251 chr12 57919335 57919335 1 + C G CESC 57919352 + 57919332 57919372 41 CTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGC CTTGTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGC < 41bp 1 0.417684408532515 1 0.276952147483826 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919352 chr12:57919335 nonsynonymous SNV 0.001 1 4 hm5C_associated_SNPs_18529 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919276-57919343
64251 chr12 57919335 57919335 1 + C G CESC 57919353 + 57919333 57919373 41 TTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCA TTGTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCA < 41bp 1 0.321300102041874 1 0.145074337720871 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919353 chr12:57919335 nonsynonymous SNV 0.001 1 3 hm5C_associated_SNPs_18530 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919276-57919343
64251 chr12 57919335 57919335 1 + C G CESC 57919354 + 57919334 57919374 41 TCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAA TGTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAA < 41bp 1 0.0948532154538448 1 0.0818881690502167 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919354 chr12:57919335 nonsynonymous SNV 0.001 1 2 hm5C_associated_SNPs_18531 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919276-57919343
64251 chr12 57919335 57919335 1 + C G CESC 57919355 + 57919335 57919375 41 CTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAAT GTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAAT < 41bp 1 0.0639695167331903 1 0.237396955490112 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919355 chr12:57919335 nonsynonymous SNV 0.001 1 1 hm5C_associated_SNPs_18532 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919276-57919343
64251 chr2 232577224 232577224 1 + G A CESC 232577210 + 232577190 232577230 41 GTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGTGG GTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATAAGGTGG < 41bp 1 0.442358306951131 1 0.555986225605011 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232577210 chr2:232577224 nonsynonymous SNV 0.996 1 35 hm5C_associated_SNPs_18533 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:232577158-232577228
64251 chr11 61404676 61404676 1 + G C CESC 61404674 + 61404654 61404694 41 GAGCCAGTGAAGCCACGCTGCTGACCATGCTCAACATCTCC GAGCCAGTGAAGCCACGCTGCTCACCATGCTCAACATCTCC < 41bp 1 0.156708679742454 1 0.0652658939361572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404674 chr11:61404676 . . 0 23 hm5C_associated_SNPs_18534 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404660-61404680
64251 chrX 41201855 41201855 1 + C G CESC 41201835 + 41201815 41201855 41 AAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATC AAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATG < 41bp 1 0.273945024349857 1 0.165093153715134 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201835 chrX:41201855 stopgain 1.000 0 41 hm5C_associated_SNPs_18535 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201855 41201855 1 + C G CESC 41201839 + 41201819 41201859 41 TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATGAGAT < 41bp 1 0.684480134757095 1 0.238089740276337 experiment 0.63103973048581 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201839 chrX:41201855 stopgain 1.000 0 37 hm5C_associated_SNPs_18536 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201855 41201855 1 + C G CESC 41201850 + 41201830 41201870 41 GGAAACAGTCGCTGGTGTGACAAATCAGATGAAGATGATTG GGAAACAGTCGCTGGTGTGACAAATGAGATGAAGATGATTG < 41bp 1 0.404511788182126 1 0.486346691846848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201850 chrX:41201855 stopgain 1.000 0 26 hm5C_associated_SNPs_18537 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr17 41348575 41348575 1 + G C CESC 41348556 + 41348536 41348576 41 CCTTTAATAGAGAAGCCAGGCTTGGGGCAGATAGAGGAAGA CCTTTAATAGAGAAGCCAGGCTTGGGGCAGATAGAGGAACA < 41bp 1 0.556906710071346 1 0.106635183095932 experiment 0.886186579857307 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348556 chr17:41348575 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_18542 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:41348550-41348577
64251 chr17 41348575 41348575 1 + G C CESC 41348563 + 41348543 41348583 41 TAGAGAAGCCAGGCTTGGGGCAGATAGAGGAAGAGAATGAA TAGAGAAGCCAGGCTTGGGGCAGATAGAGGAACAGAATGAA < 41bp 1 0.320491018153826 1 0.380658805370331 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348563 chr17:41348575 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_18543 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:41348550-41348577
64251 chr9 97767829 97767829 1 + G C CESC 97767847 + 97767827 97767867 41 ACGAAATGGATTGGAGTGAACCGGAGACCCCGAAAACGGAA ACCAAATGGATTGGAGTGAACCGGAGACCCCGAAAACGGAA < 41bp 1 0.672876189824563 1 0.591561257839203 experiment 0.654247620350873 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97767847 chr9:97767829 synonymous SNV . 0 3 hm5C_associated_SNPs_18545 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr9:97767803-97767829
64251 chr22 37425517 37425517 1 + G A CESC 37425514 + 37425494 37425534 41 AGTGGTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAG AGTGGTACATGCGCGCCCGGCCCAAGGATGTCATCTCAGAG < 41bp 1 0.417125221307175 1 0.286644577980042 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425514 chr22:37425517 nonsynonymous SNV 0.019 1 24 hm5C_associated_SNPs_18546 0 0 2 DDX55 POSTAR2 ENCODE chr22:37425483-37425604
64251 chr22 37425517 37425517 1 + G A CESC 37425515 + 37425495 37425535 41 GTGGTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAGG GTGGTACATGCGCGCCCGGCCCAAGGATGTCATCTCAGAGG < 41bp 1 0.308527744746388 1 0.356207370758057 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425515 chr22:37425517 nonsynonymous SNV 0.019 1 23 hm5C_associated_SNPs_18547 0 0 2 DDX55 POSTAR2 ENCODE chr22:37425483-37425604
64251 chr22 37425517 37425517 1 + G A CESC 37425537 + 37425517 37425557 41 GAGGATGTCATCTCAGAGGGCCGGGGGAAGACCCACTGAAG AAGGATGTCATCTCAGAGGGCCGGGGGAAGACCCACTGAAG < 41bp 1 0.657584254257925 1 0.894755065441132 experiment 0.68483149148415 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425537 chr22:37425517 nonsynonymous SNV 0.019 1 1 hm5C_associated_SNPs_18548 0 0 2 DDX55 POSTAR2 ENCODE chr22:37425483-37425604
64251 chr12 57919806 57919806 1 + C T CESC 57919787 + 57919767 57919807 41 GCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCA GCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTA < 41bp 1 0.402563915479358 1 0.440351068973541 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919787 chr12:57919806 nonsynonymous SNV 0.979 1 40 hm5C_associated_SNPs_18549 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919788 + 57919768 57919808 41 CACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAG CACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAG < 41bp 1 0.224286615741284 1 0.426280051469803 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919788 chr12:57919806 nonsynonymous SNV 0.979 1 39 hm5C_associated_SNPs_18550 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919789 + 57919769 57919809 41 ACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGC ACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAGC < 41bp 1 0.166134697356778 1 0.224053949117661 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919789 chr12:57919806 nonsynonymous SNV 0.979 1 38 hm5C_associated_SNPs_18551 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919790 + 57919770 57919810 41 CTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCT CTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAGCT < 41bp 1 0.218657047257292 1 0.422840595245361 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919790 chr12:57919806 nonsynonymous SNV 0.979 1 37 hm5C_associated_SNPs_18552 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919794 + 57919774 57919814 41 ACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCC ACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAGCTTCCC < 41bp 1 0.276421048848896 1 0.218919157981873 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919794 chr12:57919806 nonsynonymous SNV 0.979 1 33 hm5C_associated_SNPs_18553 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919795 + 57919775 57919815 41 CAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA CAGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAGCTTCCCA < 41bp 1 0.28248689332298 1 0.190167963504791 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919795 chr12:57919806 nonsynonymous SNV 0.979 1 32 hm5C_associated_SNPs_18554 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919796 + 57919776 57919816 41 AGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC AGGGCCGAAGGCCCCGTGCCCAGGCACCCTTAGCTTCCCAC < 41bp 1 0.501144656603022 1 0.851449310779572 experiment 0.997710686793955 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919796 chr12:57919806 nonsynonymous SNV 0.979 1 31 hm5C_associated_SNPs_18555 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919800 + 57919780 57919820 41 CCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT CCGAAGGCCCCGTGCCCAGGCACCCTTAGCTTCCCACTCCT < 41bp 1 0.286912844148407 1 0.0173371732234955 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919800 chr12:57919806 nonsynonymous SNV 0.979 1 27 hm5C_associated_SNPs_18556 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919802 + 57919782 57919822 41 GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA GAAGGCCCCGTGCCCAGGCACCCTTAGCTTCCCACTCCTCA < 41bp 1 0.0324533318594258 1 0.0117581784725189 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919802 chr12:57919806 nonsynonymous SNV 0.979 1 25 hm5C_associated_SNPs_18557 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919803 + 57919783 57919823 41 AAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT AAGGCCCCGTGCCCAGGCACCCTTAGCTTCCCACTCCTCAT < 41bp 1 0.0599608302811077 1 0.0215170979499817 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919803 chr12:57919806 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_18558 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919804 + 57919784 57919824 41 AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC AGGCCCCGTGCCCAGGCACCCTTAGCTTCCCACTCCTCATC < 41bp 1 0.23384632337967 1 0.0542187094688416 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919804 chr12:57919806 nonsynonymous SNV 0.979 1 23 hm5C_associated_SNPs_18559 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919809 + 57919789 57919829 41 CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTC CCGTGCCCAGGCACCCTTAGCTTCCCACTCCTCATCACTTC < 41bp 1 0.125104180444729 1 0.169918328523636 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919809 chr12:57919806 nonsynonymous SNV 0.979 1 18 hm5C_associated_SNPs_18560 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919812 + 57919792 57919832 41 TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTC TGCCCAGGCACCCTTAGCTTCCCACTCCTCATCACTTCGTC < 41bp 1 0.0707994711933376 1 0.0916458070278168 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919812 chr12:57919806 nonsynonymous SNV 0.979 1 15 hm5C_associated_SNPs_18561 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919813 + 57919793 57919833 41 GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCC GCCCAGGCACCCTTAGCTTCCCACTCCTCATCACTTCGTCC < 41bp 1 0.0812558445213103 1 0.040365070104599 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919813 chr12:57919806 nonsynonymous SNV 0.979 1 14 hm5C_associated_SNPs_18562 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919814 + 57919794 57919834 41 CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCC CCCAGGCACCCTTAGCTTCCCACTCCTCATCACTTCGTCCC < 41bp 1 0.158693280049814 1 0.0605741143226624 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919814 chr12:57919806 nonsynonymous SNV 0.979 1 13 hm5C_associated_SNPs_18563 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 57919806 57919806 1 + C T CESC 57919816 + 57919796 57919836 41 CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCCTC CAGGCACCCTTAGCTTCCCACTCCTCATCACTTCGTCCCTC < 41bp 1 0.303397222530993 1 0.281448900699615 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919816 chr12:57919806 nonsynonymous SNV 0.979 1 11 hm5C_associated_SNPs_18564 0 0 9 RBPMS POSTAR2 SRX484627 chr12:57919800-57919820
64251 chr12 22812005 22812005 1 + C T CESC 22811993 + 22811973 22812013 41 ATCCATGCTATTCATGCACACAATGGCTGGATCCCCAAATC ATCCATGCTATTCATGCACACAATGGCTGGATTCCCAAATC < 41bp 1 0.426947932070911 1 0.314227432012558 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22811993 chr12:22812005 synonymous SNV . 0 33 hm5C_associated_SNPs_18565 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr12:22811998-22812023
64251 chr1 29068970 29068970 1 + C G CESC 29068982 + 29068962 29069002 41 CAGTCCCTCCATTGGCTTCTCCTATTCTTTGGGTGAAGCTG CAGTCCCTGCATTGGCTTCTCCTATTCTTTGGGTGAAGCTG < 41bp 1 0.0600790004120553 1 0.141016393899918 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29068982 chr1:29068970 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_18566 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr14 39650864 39650864 1 + G A CESC 39650849 + 39650829 39650869 41 GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGG GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGAATCGG < 41bp 1 0.702881397147587 1 0.142943382263184 experiment 0.594237205704826 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650849 chr14:39650864 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_18567 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr2 32773058 32773058 1 + G T CESC 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGTAACAT < 41bp 1 0.165938189849673 1 0.623045742511749 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773058 stopgain 0.978 1 36 hm5C_associated_SNPs_18568 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32773058-32773074
64251 chr16 1550679 1550679 1 + G A CESC 1550684 + 1550664 1550704 41 CCGGATCCACCCCGAGGGGCCTCCCCTGAAATTCCAGGTGA CCGGATCCACCCCGAAGGGCCTCCCCTGAAATTCCAGGTGA < 41bp 1 0.313321228876523 1 0.104963093996048 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550684 chr16:1550679 synonymous SNV . 0 16 hm5C_associated_SNPs_18570 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr12 124239052 124239052 1 + T G CESC 124239064 + 124239044 124239084 41 CTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACGCAC CTCCTACCGGAGGCTCTGGGCGCTTAGCCTGGCTCACGCAC < 41bp 1 0.315940587381828 1 0.264851450920105 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239064 chr12:124239052 nonsynonymous SNV 1.000 5 9 hm5C_associated_SNPs_18571 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124239048-124239064
64251 chr1 46739326 46739326 1 + C T CESC 46739322 + 46739302 46739342 41 TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGT TGCTGGTCCTGGATTATATTCTGGTGGTGACCCGAAGCCGT < 41bp 1 0.753262476368285 1 0.559563517570496 experiment 0.49347504726343 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739322 chr1:46739326 nonsynonymous SNV 0.987 4 25 hm5C_associated_SNPs_18572 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:46739299-46739346
64251 chr3 9976232 9976232 1 + C G CESC 9976249 + 9976229 9976269 41 AGTCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGC AGTGTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGC < 41bp 1 0.528939659129421 1 0.232689678668976 experiment 0.942120681741159 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976249 chr3:9976232 nonsynonymous SNV 0.596 1 4 hm5C_associated_SNPs_18574 0 0 4 DDX24 POSTAR2 ENCODE chr3:9976224-9976247
64251 chr3 9976232 9976232 1 + C G CESC 9976251 + 9976231 9976271 41 TCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCG TGTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCG < 41bp 1 0.032879649094766 1 0.0441755652427673 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976251 chr3:9976232 nonsynonymous SNV 0.596 1 2 hm5C_associated_SNPs_18575 0 0 4 DDX24 POSTAR2 ENCODE chr3:9976224-9976247
64251 chr3 9976232 9976232 1 + C G CESC 9976252 + 9976232 9976272 41 CTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCGG GTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCGG < 41bp 1 0.223566961055853 1 0.216767311096191 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976252 chr3:9976232 nonsynonymous SNV 0.596 1 1 hm5C_associated_SNPs_18576 0 0 4 DDX24 POSTAR2 ENCODE chr3:9976224-9976247
64251 chr2 189458715 189458715 1 + G A CESC 189458701 + 189458681 189458721 41 GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGT GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCAACCCGT < 41bp 1 0.577417016573163 1 0.133650541305542 experiment 0.845165966853675 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458701 chr2:189458715 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18578 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr2 189458715 189458715 1 + G A CESC 189458714 + 189458694 189458734 41 GAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGTG GAAGGCACAGTATTTTGTCTCAACCCGTTAGACAGTAGGTG < 41bp 1 0.285880111501969 1 0.221132904291153 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458714 chr2:189458715 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_18579 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr6 109763769 109763769 1 + G A CESC 109763767 + 109763747 109763787 41 TCCATGCCGAATACAATCGACAGAAGGACATCTACCTAGCA TCCATGCCGAATACAATCGACAAAAGGACATCTACCTAGCA < 41bp 1 0.385875990577089 1 0.366760075092316 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109763767 chr6:109763769 synonymous SNV . 0 23 hm5C_associated_SNPs_18589 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr6:109763757-109763795
64251 chr3 126708574 126708574 1 + G A CESC 126708579 + 126708559 126708599 41 TCCTGCTACCGTGGTGAGGGCAAGCTCTCCCTGCCGTGGCT TCCTGCTACCGTGGTAAGGGCAAGCTCTCCCTGCCGTGGCT < 41bp 1 0.119524476617446 1 0.360177606344223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126708579 chr3:126708574 nonsynonymous SNV 0.389 1 16 hm5C_associated_SNPs_18590 0 0 3 FBL POSTAR2 GSE43666,GSM1067864 chr3:126708540-126708578
64251 chr19 40718780 40718780 1 + G A CESC 40718786 + 40718766 40718806 41 GGACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTG GGACATGGAGCCGCAGTGGGCCCCCAAAGAAGGAAGAACTG < 41bp 1 0.0643226417011435 1 0.114830166101456 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718786 chr19:40718780 nonsynonymous SNV 0.982 0 15 hm5C_associated_SNPs_18591 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718780 40718780 1 + G A CESC 40718787 + 40718767 40718807 41 GACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGG GACATGGAGCCGCAGTGGGCCCCCAAAGAAGGAAGAACTGG < 41bp 1 0.165976144963392 1 0.242102354764938 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718787 chr19:40718780 nonsynonymous SNV 0.982 0 14 hm5C_associated_SNPs_18592 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718780 40718780 1 + G A CESC 40718788 + 40718768 40718808 41 ACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGT ACATGGAGCCGCAGTGGGCCCCCAAAGAAGGAAGAACTGGT < 41bp 1 0.171099406189244 1 0.490238159894943 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718788 chr19:40718780 nonsynonymous SNV 0.982 0 13 hm5C_associated_SNPs_18593 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718780 40718780 1 + G A CESC 40718789 + 40718769 40718809 41 CATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTC CATGGAGCCGCAGTGGGCCCCCAAAGAAGGAAGAACTGGTC < 41bp 1 0.152316201767681 1 0.677771687507629 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718789 chr19:40718780 nonsynonymous SNV 0.982 0 12 hm5C_associated_SNPs_18594 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718780 40718780 1 + G A CESC 40718790 + 40718770 40718810 41 ATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG ATGGAGCCGCAGTGGGCCCCCAAAGAAGGAAGAACTGGTCG < 41bp 1 0.318076269751557 1 0.806738495826721 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718790 chr19:40718780 nonsynonymous SNV 0.982 0 11 hm5C_associated_SNPs_18595 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr1 155691314 155691314 1 + C T CESC 155691323 + 155691303 155691343 41 CCTAGGCCAAGCATGGGGATCAGCACGAGGGTCAGCACTAC CCTAGGCCAAGTATGGGGATCAGCACGAGGGTCAGCACTAC < 41bp 1 0.799020336918652 1 0.520326673984528 experiment 0.401959326162696 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DAP3 ENSG00000132676 CDS Human protein_coding chr1:155691323 chr1:155691314 nonsynonymous SNV 0.997 4 12 hm5C_associated_SNPs_18615 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:155691292-155691314
64251 chr9 131386727 131386727 1 + C T CESC 131386723 + 131386703 131386743 41 CTGGATGAGAACTCGGCCTTCCTTCAGTTCAACTGGAAGGC CTGGATGAGAACTCGGCCTTCCTTTAGTTCAACTGGAAGGC < 41bp 1 0.0214402267211009 1 0.0585028827190399 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131386723 chr9:131386727 stopgain 0.999 1 25 hm5C_associated_SNPs_18616 0 0 8 RBM15 POSTAR2 GSE78030,GSM2064710 chr9:131386720-131386740
64251 chr6 26205150 26205150 1 + G C CESC 26205141 + 26205121 26205161 41 AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA AGCGATGGATGTGGTCTACGCGCTGAAGACACAGGGACGCA < 41bp 1 0.729099504049429 1 0.172519087791443 experiment 0.541800991901142 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4E ENSG00000198518 CDS Human other chr6:26205141 chr6:26205150 nonsynonymous SNV 0.014 0 30 hm5C_associated_SNPs_18617 0 0 49 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26204840-26205240
64251 chr1 28862519 28862519 1 + C T CESC 28862499 + 28862479 28862519 41 TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTC TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTT < 41bp 1 0.548685240599243 1 0.0960194170475006 experiment 0.902629518801515 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862499 chr1:28862519 synonymous SNV . 0 41 hm5C_associated_SNPs_18618 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:28862460-28862540
64251 chr11 831574 831574 1 + C T CESC 831584 + 831564 831604 41 GGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG GGGACGCCTGTGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG < 41bp 1 0.672268089566123 1 0.769412219524384 experiment 0.655463820867753 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831584 chr11:831574 synonymous SNV . 0 11 hm5C_associated_SNPs_18619 0 0 8 BUD13 POSTAR2 ENCODE chr11:831536-831580
64251 chr11 67258438 67258438 1 + C T CESC 67258452 + 67258432 67258472 41 AAAGCCCGGTTCCGGGGGATCTTCTCCCATTGACAGGAGCA AAAGCCTGGTTCCGGGGGATCTTCTCCCATTGACAGGAGCA < 41bp 1 0.141344339434654 1 0.111422181129456 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AIP ENSG00000110711 CDS Human protein_coding chr11:67258452 chr11:67258438 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_18620 0 0 1 LARP4 POSTAR2 ENCODE chr11:67258417-67258554
64251 chr2 71660368 71660368 1 + A G CESC 71660380 + 71660360 71660400 41 GAAAAAGCAATGACAAATCACTGCAAGAGTACACGTCATAA GAAAAAGCGATGACAAATCACTGCAAGAGTACACGTCATAA < 41bp 1 0.688829679407364 1 0.389955699443817 experiment 0.622340641185272 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71660380 chr2:71660368 synonymous SNV . 0 9 hm5C_associated_SNPs_18621 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71660312-71660398
64251 chr17 37358641 37358641 1 + C G CESC 37358628 + 37358608 37358648 41 ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTGGATGCCG < 41bp 1 0.102947753661812 1 0.0401149988174438 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358628 chr17:37358641 nonsynonymous SNV 0.988 2 34 hm5C_associated_SNPs_18622 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358641 37358641 1 + C G CESC 37358657 + 37358637 37358677 41 GGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA GGCTGGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA < 41bp 1 0.253987050812396 1 0.0705798268318176 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358657 chr17:37358641 nonsynonymous SNV 0.988 2 5 hm5C_associated_SNPs_18623 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr3 52233277 52233277 1 + G A CESC 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGAGTGTTGTTCGCCACTGCCCATTCTTATCCCGAGT < 41bp 1 0.361623683113007 1 0.193198621273041 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233277 nonsynonymous SNV 0.994 2 20 hm5C_associated_SNPs_18624 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52233243-52233288
64251 chr4 26407815 26407815 1 + T C CESC 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ACTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT < 41bp 1 0.34659496618693 1 0.259294748306274 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407815 synonymous SNV . 0 2 hm5C_associated_SNPs_18625 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr4:26407791-26407816
64251 chr4 20568984 20568984 1 + G A CESC 20568982 + 20568962 20569002 41 AGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGG AGTGATCCAGTTGACTTTTACCAATGCACCTGTCCATATGG < 41bp 1 0.0700011306361123 1 0.179872900247574 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568982 chr4:20568984 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_18626 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr4 20568984 20568984 1 + G A CESC 20568983 + 20568963 20569003 41 GTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGT GTGATCCAGTTGACTTTTACCAATGCACCTGTCCATATGGT < 41bp 1 0.127602436814906 1 0.408415645360947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568983 chr4:20568984 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_18627 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr8 25149596 25149596 1 + G A CESC 25149584 + 25149564 25149604 41 CAGCTGCAGCAGATGACGTACAGCCTGATCGAGTGGCGGTC CAGCTGCAGCAGATGACGTACAGCCTGATCGAATGGCGGTC < 41bp 1 0.236718471603999 1 0.473519414663315 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149584 chr8:25149596 synonymous SNV . 0 33 hm5C_associated_SNPs_18629 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr8 25149596 25149596 1 + G A CESC 25149611 + 25149591 25149631 41 ATCGAGTGGCGGTCCCAGATCCTGTCTGGGACGCTCCCCAA ATCGAATGGCGGTCCCAGATCCTGTCTGGGACGCTCCCCAA < 41bp 1 0.350792830919392 1 0.620818972587585 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149611 chr8:25149596 synonymous SNV . 0 6 hm5C_associated_SNPs_18630 0 0 2 GRWD1 POSTAR2 ENCODE chr8:25149542-25149597
64251 chr15 42052697 42052697 1 + C G CESC 42052715 + 42052695 42052735 41 TCCAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT TCGAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT < 41bp 1 0.0210569432172374 1 0.0432591736316681 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42052715 chr15:42052697 synonymous SNV . 0 3 hm5C_associated_SNPs_18631 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:42052668-42052704
64251 chr11 74329661 74329661 1 + T C CESC 74329645 + 74329625 74329665 41 GCTGAATCCTCTTCGTCTTCCAAAAAGTTTGAGCAGTCACA GCTGAATCCTCTTCGTCTTCCAAAAAGTTTGAGCAGCCACA < 41bp 1 0.480343735078389 1 0.729762434959412 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329645 chr11:74329661 nonsynonymous SNV 0.960 0 37 hm5C_associated_SNPs_18632 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74329649-74329675
64251 chr11 74329661 74329661 1 + T C CESC 74329667 + 74329647 74329687 41 AAAAGTTTGAGCAGTCACATCTTCACATGTCAAGTGAGACA AAAAGTTTGAGCAGCCACATCTTCACATGTCAAGTGAGACA < 41bp 1 0.393833606216633 1 0.174960494041443 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329667 chr11:74329661 nonsynonymous SNV 0.960 0 15 hm5C_associated_SNPs_18633 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74329649-74329675
64251 chr11 74329661 74329661 1 + T C CESC 74329670 + 74329650 74329690 41 AGTTTGAGCAGTCACATCTTCACATGTCAAGTGAGACACAA AGTTTGAGCAGCCACATCTTCACATGTCAAGTGAGACACAA < 41bp 1 0.632368866241796 1 0.191314458847046 experiment 0.735262267516408 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329670 chr11:74329661 nonsynonymous SNV 0.960 0 12 hm5C_associated_SNPs_18634 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74329649-74329675
64251 chr22 38864118 38864118 1 + A T CESC 38864113 + 38864093 38864133 41 GCGCGGGTGCGATCGCGGAGCTGTGAGGCGCAGGCAGGGCT GCGCGGGTGCGATCGCGGAGCTGTGTGGCGCAGGCAGGGCT < 41bp 1 0.745891881177876 1 0.524087131023407 experiment 0.508216237644248 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDELR3 ENSG00000100196 UTR5 Human protein_coding chr22:38864113 chr22:38864118 . . 0 26 hm5C_associated_SNPs_18637 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:38864100-38864120
64251 chr19 46887119 46887119 1 + C T CESC 46887105 + 46887085 46887125 41 CTCCTCAACATATTCGAGCTCAACGGTTTACCCTCGGAGAC CTCCTCAACATATTCGAGCTCAACGGTTTACCCTTGGAGAC < 41bp 1 0.586155038076544 1 0.290757685899734 experiment 0.827689923846912 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46887105 chr19:46887119 nonsynonymous SNV 0.993 4 35 hm5C_associated_SNPs_18638 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:46887073-46887129
64251 chr3 122419839 122419839 1 + G A CESC 122419849 + 122419829 122419869 41 GACTTGGCACGGCTTCCTGTCGATGTGGTGGTGAATGCATC GACTTGGCACAGCTTCCTGTCGATGTGGTGGTGAATGCATC < 41bp 1 0.312132363675936 1 0.517630398273468 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419849 chr3:122419839 nonsynonymous SNV 0.000 0 11 hm5C_associated_SNPs_18639 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:122419831-122419845
64251 chr11 108206586 108206586 1 + G C CESC 108206601 + 108206581 108206621 41 GACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT GACCTCAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT < 41bp 1 0.160592139741537 1 0.159273445606232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108206601 chr11:108206586 synonymous SNV . 0 6 hm5C_associated_SNPs_18640 0 0 4 BUD13 POSTAR2 ENCODE chr11:108206569-108206614
64251 chr1 36026505 36026505 1 + A T CESC 36026504 + 36026484 36026524 41 GCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCT GCCCCTCTTTTTGCCCCCGACTACCGTGCCCCCTGAATGCT < 41bp 1 0.214742836793694 1 0.0716183185577393 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026504 chr1:36026505 synonymous SNV . 0 22 hm5C_associated_SNPs_18642 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr1 36026505 36026505 1 + A T CESC 36026508 + 36026488 36026528 41 CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCTACCG CTCTTTTTGCCCCCGACTACCGTGCCCCCTGAATGCTACCG < 41bp 1 0.197013390445996 1 0.508080542087555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026508 chr1:36026505 synonymous SNV . 0 18 hm5C_associated_SNPs_18643 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr14 61285492 61285492 1 + C T CESC 61285479 + 61285459 61285499 41 TTGCTCTGCTTTTGGCTCAGCATAAAGATAGATCTACCCAA TTGCTCTGCTTTTGGCTCAGCATAAAGATAGATTTACCCAA < 41bp 1 0.340652443748176 1 0.417488694190979 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61285479 chr14:61285492 nonsynonymous SNV 0.852 1 34 hm5C_associated_SNPs_18644 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:61285459-61285522
64251 chr19 45162113 45162113 1 + C G CESC 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TGTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT < 41bp 1 0.633036620456527 1 0.597163438796997 experiment 0.733926759086945 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162113 nonsynonymous SNV 0.001 1 2 hm5C_associated_SNPs_18645 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:45162092-45162118
64251 chr11 209418 209418 1 + G A CESC 209400 + 209380 209420 41 TGGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCT TGGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAACT < 41bp 1 0.0288504373925153 1 0.449622839689255 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209400 chr11:209418 synonymous SNV . 0 39 hm5C_associated_SNPs_18647 0 0 3 FMR1 POSTAR2 ENCODE chr11:209406-209439
64251 chr11 209418 209418 1 + G A CESC 209401 + 209381 209421 41 GGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCTG GGAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAACTG < 41bp 1 0.185597073908371 1 0.319804698228836 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209401 chr11:209418 synonymous SNV . 0 38 hm5C_associated_SNPs_18648 0 0 3 FMR1 POSTAR2 ENCODE chr11:209406-209439
64251 chr11 209418 209418 1 + G A CESC 209402 + 209382 209422 41 GAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAGCTGC GAGCCGCTCTTCTCCCTGCCCACAGAGACTGGCGGAACTGC < 41bp 1 0.280598866100314 1 0.511492609977722 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209402 chr11:209418 synonymous SNV . 0 37 hm5C_associated_SNPs_18649 0 0 3 FMR1 POSTAR2 ENCODE chr11:209406-209439
64251 chr9 125143678 125143678 1 + C G CESC 125143665 + 125143645 125143685 41 ACCAGGGAAGAAGCAGTTGCCAGATGCCCAGCTCCTGGCCC ACCAGGGAAGAAGCAGTTGCCAGATGCCCAGCTGCTGGCCC < 41bp 1 0.655740616818209 1 0.954894006252289 experiment 0.688518766363582 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125143665 chr9:125143678 synonymous SNV . 0 34 hm5C_associated_SNPs_18650 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:125143670-125143695
64251 chr17 57057649 57057649 1 + C G CESC 57057658 + 57057638 57057678 41 AGAACTCTTTTCAAGGAGGGCAAGAAGATGGTGGGGATGAT AGAACTCTTTTGAAGGAGGGCAAGAAGATGGTGGGGATGAT < 41bp 1 0.443757444953545 1 0.353278458118439 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPM1E ENSG00000175175 CDS Human protein_coding chr17:57057658 chr17:57057649 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_18651 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:57057609-57057650
64251 chrX 84502592 84502592 1 + G T CESC 84502590 + 84502570 84502610 41 TTGCTAAGTATGGATTCAGGCGGTGGAAGTCTTGGATTGCA TTGCTAAGTATGGATTCAGGCGTTGGAAGTCTTGGATTGCA < 41bp 1 0.310454180967563 1 0.338896006345749 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84502590 chrX:84502592 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_18653 0 0 31 U2AF2 POSTAR2 GSE83923,CSM2221661 chrX:84502540-84502600
64251 chr14 105179925 105179925 1 + C T CESC 105179914 + 105179894 105179934 41 CGGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCA CGGGGGCAGCAAGGCAGCCTCCATGGATCCCTCAAGAGCCA < 41bp 1 0.15555354413761 1 0.355823427438736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179914 chr14:105179925 nonsynonymous SNV 0.004 1 32 hm5C_associated_SNPs_18654 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105179912-105179935
64251 chr14 105179925 105179925 1 + C T CESC 105179915 + 105179895 105179935 41 GGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCAC GGGGGCAGCAAGGCAGCCTCCATGGATCCCTCAAGAGCCAC < 41bp 1 0.546933669546391 1 0.636946439743042 experiment 0.906132660907217 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179915 chr14:105179925 nonsynonymous SNV 0.004 1 31 hm5C_associated_SNPs_18655 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105179912-105179935
64251 chrX 129159306 129159306 1 + G A CESC 129159311 + 129159291 129159331 41 AAATATCAGACTGGGGAGTACCTGACAGAGCAAGAAGACGA AAATATCAGACTGGGAAGTACCTGACAGAGCAAGAAGACGA < 41bp 1 0.125867014065905 1 0.1121826171875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129159311 chrX:129159306 nonsynonymous SNV 0.998 3 16 hm5C_associated_SNPs_18656 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chrX:129159295-129159314
64251 chrX 12838851 12838851 1 + G T CESC 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCTCCTTTGAGGCTGTTGTCGTCACAAACACAA < 41bp 1 0.295872348278837 1 0.0669369399547577 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838851 nonsynonymous SNV 0.991 0 11 hm5C_associated_SNPs_18657 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:12838827-12838863
64251 chrX 73042704 73042704 1 - C T CESC 73042691 - 73042671 73042711 41 TAGCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT TAGCTGTAATATGTTCGATACTAAGGAAAAACTAAACAGAT < 41bp 1 0.151193280774084 1 0.334533661603928 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042691 chrX:73042704 . . 0 8 hm5C_associated_SNPs_18658 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr22 50960208 50960208 1 + C G CESC 50960214 + 50960194 50960234 41 GTGTGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGC GTGTGGAGGAGGCTGTGGGACAGAAGCGCAAGAGGAAGGGC < 41bp 1 0.775135287964246 1 0.433242857456207 experiment 0.449729424071508 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50960214 chr22:50960208 nonsynonymous SNV 0.972 0 15 hm5C_associated_SNPs_18660 0 0 6 DDX24 POSTAR2 ENCODE chr22:50960168-50960211
64251 chr12 21621553 21621553 1 + G A CESC 21621565 + 21621545 21621585 41 GGACGAATGATGGGAGCTGTCTTAATTGGTGAAACCGATTT GGACGAATAATGGGAGCTGTCTTAATTGGTGAAACCGATTT < 41bp 1 0.651343775558493 1 0.357181787490845 experiment 0.697312448883014 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21621565 chr12:21621553 nonsynonymous SNV 0.990 1 9 hm5C_associated_SNPs_18662 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:21621526-21621567
64251 chr12 102120186 102120186 1 + C T CESC 102120175 + 102120155 102120195 41 GACTGCATGTCATCAAGCACCTGAACAGGTTCACAAGCATA GACTGCATGTCATCAAGCACCTGAACAGGTTTACAAGCATA < 41bp 1 0.651828727393636 1 0.250088602304459 experiment 0.696342545212729 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102120175 chr12:102120186 nonsynonymous SNV 1.000 0 32 hm5C_associated_SNPs_18663 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:102120177-102120200
64251 chr12 56504386 56504386 1 + C T CESC 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGAGAACCACTATTTACAAACGAGACCTCTCTAAACA < 41bp 1 0.352451384665064 1 0.409377574920654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504386 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_18665 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr15 64388288 64388288 1 + G C CESC 64388268 + 64388248 64388288 41 GAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTCCG GAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTCCC < 41bp 1 0.568442024424658 1 0.550235211849213 experiment 0.863115951150683 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64388268 chr15:64388288 nonsynonymous SNV 0.999 0 41 hm5C_associated_SNPs_18666 0 0 4 EFTUD2 POSTAR2 ENCODE chr15:64388288-64388337
64251 chr4 6925609 6925609 1 + G A CESC 6925607 + 6925587 6925627 41 CAGCGTGTCCAGTCTTGGGACAGAGCTGTCCACCACGCTGT CAGCGTGTCCAGTCTTGGGACAAAGCTGTCCACCACGCTGT < 41bp 1 0.364034689845673 1 0.123025208711624 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925607 chr4:6925609 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_18667 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:6925578-6925611
64251 chr6 163984548 163984548 1 + C T CESC 163984557 + 163984537 163984577 41 CCTGCGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT CCTGCGTACTCTTACGCCAGCTGGCCCTACCATAATGCCTT < 41bp 1 0.362676163258051 1 0.266154527664185 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QKI ENSG00000112531 CDS Human protein_coding chr6:163984557 chr6:163984548 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_18668 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:163984498-163984552
64251 chr2 26410287 26410287 1 + G A CESC 26410281 + 26410261 26410301 41 TCACAGAGCCTCTGAGCGGTCGAGCCGCCTCCCTTCTGGGG TCACAGAGCCTCTGAGCGGTCGAGCCACCTCCCTTCTGGGG < 41bp 1 0.438619191624093 1 0.629522085189819 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26410281 chr2:26410287 nonsynonymous SNV 0.007 0 27 hm5C_associated_SNPs_18669 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:26410203-26410341
64251 chr10 17271880 17271880 1 + G C CESC 17271865 + 17271845 17271885 41 GGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCG GGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGACATGCG < 41bp 1 0.0635880019780716 1 0.120599925518036 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271865 chr10:17271880 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_18671 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271880-17271900
64251 chr10 17271880 17271880 1 + G C CESC 17271866 + 17271846 17271886 41 GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGG GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGACATGCGG < 41bp 1 0.727436504107785 1 0.421465843915939 experiment 0.54512699178443 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271866 chr10:17271880 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18672 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271880-17271900
64251 chr19 50169991 50169991 1 + G A CESC 50169998 + 50169978 50170018 41 GGGAAGACACGCTGAGGGTCCTAGCTGCCTTCCTTAGGCGT GGGAAGACACGCTAAGGGTCCTAGCTGCCTTCCTTAGGCGT < 41bp 1 0.361818889200155 1 0.20948988199234 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50169998 chr19:50169991 synonymous SNV . 0 14 hm5C_associated_SNPs_18688 0 0 1 DDX3X POSTAR2 ENCODE chr19:50169940-50170002
64251 chr6 163984559 163984559 1 + G T CESC 163984557 + 163984537 163984577 41 CCTGCGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT CCTGCGTACTCCTACGCCAGCTTGCCCTACCATAATGCCTT < 41bp 1 0.151175376216045 1 0.0790152549743652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QKI ENSG00000112531 CDS Human protein_coding chr6:163984557 chr6:163984559 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_18690 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:163984503-163984565
64251 chr19 34302352 34302352 1 + G A CESC 34302343 + 34302323 34302363 41 AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGT AAGGCCCTCATCGAGGAGGTCTTCCCCGAAACCGGAGACGT < 41bp 1 0.101965659130106 1 0.0505620837211609 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302343 chr19:34302352 synonymous SNV . 0 30 hm5C_associated_SNPs_18691 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34302315-34302352
64251 chr19 54606438 54606438 1 + C A CESC 54606432 + 54606412 54606452 41 ACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGA ACCCCTTCAGGAGTCGGCGCCTTCCTAAAGAATGCCTGGGA < 41bp 1 0.12853303691886 1 0.110865831375122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54606432 chr19:54606438 nonsynonymous SNV 0.964 0 27 hm5C_associated_SNPs_18693 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:54606420-54606440
64251 chr1 39853296 39853296 1 + G C CESC 39853302 + 39853282 39853322 41 AAGCTAAGATGTCTGAGTTGCGAGTCACTCTGGATCCAGTG AAGCTAAGATGTCTCAGTTGCGAGTCACTCTGGATCCAGTG < 41bp 1 0.12791881612498 1 0.464183330535889 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39853302 chr1:39853296 nonsynonymous SNV 0.996 0 15 hm5C_associated_SNPs_18694 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39853286-39853318
64251 chr2 173451105 173451105 1 + G A CESC 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCGTGTTGAGACCTCCCGCACAGTGCCTCTGGT < 41bp 1 0.336725978835353 1 0.683308839797974 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451105 nonsynonymous SNV 0.037 1 28 hm5C_associated_SNPs_18695 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr1 249212358 249212358 1 + G A CESC 249212364 + 249212344 249212384 41 GCCTGTGTGTATCTGGAGAGCAATGCTGACACAACATCTCA GCCTGTGTGTATCTAGAGAGCAATGCTGACACAACATCTCA < 41bp 1 0.437766681557766 1 0.0588943660259247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212364 chr1:249212358 synonymous SNV . 0 15 hm5C_associated_SNPs_18697 0 0 1 RBM15 POSTAR2 ENCODE chr1:249212328-249212363
64251 chr8 11696000 11696000 1 + G A CESC 11695990 + 11695970 11696010 41 AGAATCTTCCCAACTGTCAGCTGATTTCCCGAAGCCACTAC AGAATCTTCCCAACTGTCAGCTGATTTCCCAAAGCCACTAC < 41bp 1 0.489075843647415 1 0.180673509836197 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11695990 chr8:11696000 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_18698 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:11695947-11696024
64251 chr16 27374370 27374370 1 + C T CESC 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGTC < 41bp 1 0.719097743665838 1 0.418380051851273 experiment 0.561804512668325 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374370 nonsynonymous SNV 0.001 1 40 hm5C_associated_SNPs_18699 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr3 142756119 142756119 1 + C T CESC 142756138 + 142756118 142756158 41 TCGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGAT TTGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGAT < 41bp 1 0.0432010039089975 1 0.0851345658302307 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142756138 chr3:142756119 synonymous SNV . 0 2 hm5C_associated_SNPs_18700 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:142756100-142756120
64251 chr3 142756119 142756119 1 + C T CESC 142756139 + 142756119 142756159 41 CGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGATG TGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGATG < 41bp 1 0.32997454423025 1 0.29779851436615 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142756139 chr3:142756119 synonymous SNV . 0 1 hm5C_associated_SNPs_18701 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:142756100-142756120
64251 chr12 72316786 72316786 1 + G A CESC 72316769 + 72316749 72316789 41 TTTTTCATATCCAGGAATTGCCACAAGCAGTCTGTGAGATC TTTTTCATATCCAGGAATTGCCACAAGCAGTCTGTGAAATC < 41bp 1 0.406975142904303 1 0.105422288179398 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72316769 chr12:72316786 synonymous SNV . 0 38 hm5C_associated_SNPs_18702 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:72316773-72316839
64251 chr12 72316786 72316786 1 + G A CESC 72316770 + 72316750 72316790 41 TTTTCATATCCAGGAATTGCCACAAGCAGTCTGTGAGATCC TTTTCATATCCAGGAATTGCCACAAGCAGTCTGTGAAATCC < 41bp 1 0.772060047880737 1 0.380951970815659 experiment 0.455879904238525 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72316770 chr12:72316786 synonymous SNV . 0 37 hm5C_associated_SNPs_18703 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:72316773-72316839
64251 chr5 74069849 74069849 1 + T C CESC 74069862 + 74069842 74069882 41 GAGCGAATTGGGCCTTGTGACACAAGGAGGCAAAGTTATTT GAGCGAACTGGGCCTTGTGACACAAGGAGGCAAAGTTATTT < 41bp 1 0.748132723879678 1 0.334720820188522 experiment 0.503734552240643 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069862 chr5:74069849 synonymous SNV . 0 8 hm5C_associated_SNPs_18704 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:74069817-74069854
64251 chr2 39008747 39008747 1 + G A CESC 39008755 + 39008735 39008775 41 GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCT GAAACTATGAATAAAGGGGACCATAGAGTGAGGGAGAAGCT < 41bp 1 0.193001654923801 1 0.0817839801311493 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008755 chr2:39008747 nonsynonymous SNV 0.867 2 13 hm5C_associated_SNPs_18706 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr2:39008706-39008757
64251 chr20 62648114 62648114 1 + C T CESC 62648117 + 62648097 62648137 41 GCTGGGAGTGTGGCCACCTGCCAGGCCGTCATGCGTGCCGT GCTGGGAGTGTGGCCACTTGCCAGGCCGTCATGCGTGCCGT < 41bp 1 0.743536664924219 1 0.565460860729218 experiment 0.512926670151562 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62648117 chr20:62648114 synonymous SNV . 0 18 hm5C_associated_SNPs_18707 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr20:62648109-62648154
64251 chr20 62648114 62648114 1 + C T CESC 62648123 + 62648103 62648143 41 AGTGTGGCCACCTGCCAGGCCGTCATGCGTGCCGTGATTGG AGTGTGGCCACTTGCCAGGCCGTCATGCGTGCCGTGATTGG < 41bp 1 0.40349809271582 1 0.0556627511978149 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62648123 chr20:62648114 synonymous SNV . 0 12 hm5C_associated_SNPs_18708 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr20:62648109-62648154
64251 chr20 62648114 62648114 1 + C T CESC 62648130 + 62648110 62648150 41 CCACCTGCCAGGCCGTCATGCGTGCCGTGATTGGGATTGGG CCACTTGCCAGGCCGTCATGCGTGCCGTGATTGGGATTGGG < 41bp 1 0.163490772954713 1 0.0266062319278717 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62648130 chr20:62648114 synonymous SNV . 0 5 hm5C_associated_SNPs_18709 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr20:62648109-62648154
64251 chr11 119142571 119142571 1 + G C CESC 119142558 + 119142538 119142578 41 TCGGATTACTAAAGCAGATGCTGCGGAATTTTGGAGAAAAG TCGGATTACTAAAGCAGATGCTGCGGAATTTTGCAGAAAAG < 41bp 1 0.310853207022435 1 0.372774958610535 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CBL ENSG00000110395 CDS Human protein_coding chr11:119142558 chr11:119142571 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_18710 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119142554-119142591
64251 chr12 95877012 95877012 1 + G A CESC 95877015 + 95876995 95877035 41 AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA AGATGGCGATGGAGATGAAGCAACTGGAAAGAAGAAGAAAA < 41bp 1 0.463340241941279 1 0.393874019384384 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877015 chr12:95877012 nonsynonymous SNV 0.999 2 18 hm5C_associated_SNPs_18711 0 0 29 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:95876980-95877020
64251 chr19 18976551 18976551 1 + G A CESC 18976545 + 18976525 18976565 41 ATCTCCATGAGCCAGCCTTCCCAGATGAGCCAGCCCGGCCT ATCTCCATGAGCCAGCCTTCCCAGATAAGCCAGCCCGGCCT < 41bp 1 0.726379274823265 1 0.0908582210540771 experiment 0.54724145035347 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976545 chr19:18976551 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_18712 0 0 2 RPS3 POSTAR2 ENCODE chr19:18976531-18976577
64251 chr19 42729195 42729195 1 + G C CESC 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA GAGTTCTTGCAGCATCAGGGCACCCACTTTGACTCCCTAGA < 41bp 1 0.108176086194711 1 0.0690456032752991 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729195 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_18713 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42729180-42729200
64251 chr1 154233543 154233543 1 + G T CESC 154233546 + 154233526 154233566 41 TACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTA TACTATACAGGGGTCCCTGGCCTCCCCAGCACCTTCCAGTA < 41bp 1 0.0963333007470768 1 0.211000263690948 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154233546 chr1:154233543 synonymous SNV . 0 18 hm5C_associated_SNPs_18714 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:154233522-154233543
64251 chr11 65062110 65062110 1 + G A CESC 65062109 + 65062089 65062129 41 CTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGGTAAGA CTGCTTTTCCACCTGGGGGCCAAGGAGATCAGTAGGTAAGA < 41bp 1 0.482868503532976 1 0.726749062538147 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65062109 chr11:65062110 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_18715 0 0 4 BUD13 POSTAR2 ENCODE chr11:65062104-65062185
64251 chr2 170804131 170804131 1 + T G CESC 170804126 + 170804106 170804146 41 TTAGTGTCAAACATGCGACACTTTATAAACTATGTTAGAGT TTAGTGTCAAACATGCGACACTTTAGAAACTATGTTAGAGT < 41bp 1 0.0741663281233972 1 0.0634437501430511 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBR3 ENSG00000144357 CDS Human protein_coding chr2:170804126 chr2:170804131 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_18716 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:170804121-170804163
64251 chr3 184104671 184104671 1 + G A CESC 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCACCCA < 41bp 1 0.721046553903067 1 0.706035435199738 experiment 0.557906892193866 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104671 synonymous SNV . 0 37 hm5C_associated_SNPs_18717 0 0 3 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chrX 123195682 123195682 1 + G A CESC 123195669 + 123195649 123195689 41 GATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAAT GATTGAAATAATGCTTTGTACCATTAGACAAGCAGCTGAAT < 41bp 1 0.0704433718743701 1 0.0286092460155487 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195669 chrX:123195682 synonymous SNV . 0 34 hm5C_associated_SNPs_18719 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:123195625-123195719
64251 chrX 123195682 123195682 1 + G A CESC 123195670 + 123195650 123195690 41 ATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAATG ATTGAAATAATGCTTTGTACCATTAGACAAGCAGCTGAATG < 41bp 1 0.360365803530316 1 0.0805231630802155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195670 chrX:123195682 synonymous SNV . 0 33 hm5C_associated_SNPs_18720 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:123195625-123195719
64251 chr2 198571412 198571412 1 + G A CESC 198571398 + 198571378 198571418 41 CCTTCTGAGACCTACCCAGCCTTCTGCACTACCTGCTTCCC CCTTCTGAGACCTACCCAGCCTTCTGCACTACCTACTTCCC < 41bp 1 0.219578086162979 1 0.0401414632797241 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571398 chr2:198571412 nonsynonymous SNV 0.932 0 35 hm5C_associated_SNPs_18721 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:198571363-198571414
64251 chrX 153696531 153696531 1 + G A CESC 153696529 + 153696509 153696549 41 ACGCCGTGCGCGTGCTCTTCCCGGGCATCGAGGCCCACCCG ACGCCGTGCGCGTGCTCTTCCCAGGCATCGAGGCCCACCCG < 41bp 1 0.46309827459595 1 0.710987567901611 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696529 chrX:153696531 synonymous SNV . 0 23 hm5C_associated_SNPs_18722 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chrX 153696531 153696531 1 + G A CESC 153696537 + 153696517 153696557 41 CGCGTGCTCTTCCCGGGCATCGAGGCCCACCCGGTGCTCAA CGCGTGCTCTTCCCAGGCATCGAGGCCCACCCGGTGCTCAA < 41bp 1 0.65675845270244 1 0.977012276649475 experiment 0.68648309459512 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696537 chrX:153696531 synonymous SNV . 0 15 hm5C_associated_SNPs_18723 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chrX 135291510 135291510 1 + G A CESC 135291501 + 135291481 135291521 41 TCTCACCCTGTTTCCCAGCGCCAACCTCCGGGGCAGGCATC TCTCACCCTGTTTCCCAGCGCCAACCTCCAGGGCAGGCATC < 41bp 1 0.0735975453163849 1 0.145043253898621 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FHL1 ENSG00000022267 CDS Human protein_coding chrX:135291501 chrX:135291510 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_18725 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135291498-135291560
64251 chrX 135291510 135291510 1 + G A CESC 135291502 + 135291482 135291522 41 CTCACCCTGTTTCCCAGCGCCAACCTCCGGGGCAGGCATCC CTCACCCTGTTTCCCAGCGCCAACCTCCAGGGCAGGCATCC < 41bp 1 0.179579859714858 1 0.0411967933177948 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FHL1 ENSG00000022267 CDS Human protein_coding chrX:135291502 chrX:135291510 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_18726 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135291498-135291560
64251 chr3 99509748 99509748 1 + G A CESC 99509758 + 99509738 99509778 41 GCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCA GCAAGGAGATACCCCACTTGCAGTATGGCAAAGAGTATCCA < 41bp 1 0.624286398537578 1 0.250637888908386 experiment 0.751427202924843 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99509758 chr3:99509748 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_18727 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr3:99509740-99509760
64251 chr7 2695739 2695739 1 + G T CESC 2695731 + 2695711 2695751 41 GTGCGTGCCCCCCAGGACCCCCTCCTCCGCGTCCAGGAGGT GTGCGTGCCCCCCAGGACCCCCTCCTCCTCGTCCAGGAGGT < 41bp 1 0.0227449883851173 1 0.0784537196159363 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2695731 chr7:2695739 nonsynonymous SNV 0.931 0 29 hm5C_associated_SNPs_18728 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:2695738-2695739
64251 chr7 2695739 2695739 1 + G T CESC 2695734 + 2695714 2695754 41 CGTGCCCCCCAGGACCCCCTCCTCCGCGTCCAGGAGGTGCT CGTGCCCCCCAGGACCCCCTCCTCCTCGTCCAGGAGGTGCT < 41bp 1 0.0197660654972534 1 0.136904418468475 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2695734 chr7:2695739 nonsynonymous SNV 0.931 0 26 hm5C_associated_SNPs_18729 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:2695738-2695739
64251 chrX 73044562 73044562 1 - G A CESC 73044553 - 73044533 73044573 41 GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAATGT GAGATCCAGACTGAAAGTCACTTAATTCAGCTTGCGAATGT < 41bp 1 0.128028097479734 1 0.0293511152267456 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044553 chrX:73044562 . . 0 12 hm5C_associated_SNPs_18730 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044562 73044562 1 - G A CESC 73044555 - 73044535 73044575 41 GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAAT GTGAGATCCAGACTGAAAGTCACTTAATTCAGCTTGCGAAT < 41bp 1 0.0711629641504003 1 0.0324897766113281 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044555 chrX:73044562 . . 0 14 hm5C_associated_SNPs_18731 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044562 73044562 1 - G A CESC 73044568 - 73044548 73044588 41 TGAAGTAATAGATGTGAGATCCAGACCGAAAGTCACTTAAT TGAAGTAATAGATGTGAGATCCAGACTGAAAGTCACTTAAT < 41bp 1 0.327787422263919 1 0.688329696655273 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044568 chrX:73044562 . . 0 27 hm5C_associated_SNPs_18732 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 135106633 135106633 1 + T C CESC 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTC < 41bp 1 0.349311933891847 1 0.676746785640717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106633 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_18733 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:135106606-135106644
64251 chr1 28975147 28975147 1 + C T CESC 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGTGGCACACGTAGGGTAACTCGATTGCTC < 41bp 1 0.578270863832667 1 0.222330868244171 experiment 0.843458272334665 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975147 . . 0 28 hm5C_associated_SNPs_18734 0 0 94 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975147 28975147 1 + C T CESC 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT TAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT < 41bp 1 0.744023788972579 1 0.811176061630249 experiment 0.511952422054843 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975147 . . 0 1 hm5C_associated_SNPs_18735 0 0 94 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr19 49132392 49132392 1 + A T CESC 49132399 + 49132379 49132419 41 AGAACCCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG AGAACCCCTGCCCTTCCTGTCCCTCAACGGTGGGGGCCCAG < 41bp 1 0.0680954375653788 1 0.211095750331879 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132399 chr19:49132392 nonsynonymous SNV 0.904 1 14 hm5C_associated_SNPs_18736 0 0 2 HNRNPK POSTAR2 ENCODE chr19:49132326-49132396
64251 chrX 49031028 49031028 1 + A T CESC 49031034 + 49031014 49031054 41 CCTGCAGACCCCGCAGATGGCCCGGTGTAGGCGAACTTCCC CCTGCAGACCCCGCTGATGGCCCGGTGTAGGCGAACTTCCC < 41bp 1 0.566963147012978 1 0.269195377826691 experiment 0.866073705974044 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLP2 ENSG00000102007 CDS Human protein_coding chrX:49031034 chrX:49031028 synonymous SNV . 0 15 hm5C_associated_SNPs_18738 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49031020-49031060
64251 chr11 125513714 125513714 1 + G A CESC 125513698 + 125513678 125513718 41 CTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGT CTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGATGGT < 41bp 1 0.261962316555723 1 0.259312987327576 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513698 chr11:125513714 nonsynonymous SNV 0.926 0 37 hm5C_associated_SNPs_18739 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:125513704-125513734
64251 chr11 125513714 125513714 1 + G A CESC 125513699 + 125513679 125513719 41 TTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTG TTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGATGGTG < 41bp 1 0.659326729908489 1 0.395488500595093 experiment 0.681346540183021 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513699 chr11:125513714 nonsynonymous SNV 0.926 0 36 hm5C_associated_SNPs_18740 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:125513704-125513734
64251 chr11 125513714 125513714 1 + G A CESC 125513700 + 125513680 125513720 41 TTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGT TTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGATGGTGT < 41bp 1 0.104773726080322 1 0.168052792549133 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513700 chr11:125513714 nonsynonymous SNV 0.926 0 35 hm5C_associated_SNPs_18741 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:125513704-125513734
64251 chr11 125513714 125513714 1 + G A CESC 125513701 + 125513681 125513721 41 TTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTG TTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGATGGTGTG < 41bp 1 0.401436469656583 1 0.444914638996124 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513701 chr11:125513714 nonsynonymous SNV 0.926 0 34 hm5C_associated_SNPs_18742 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:125513704-125513734
64251 chr11 62655934 62655934 1 + C T CESC 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATTCGCCAC < 41bp 1 0.419226790590298 1 0.224664688110352 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655934 synonymous SNV . 0 35 hm5C_associated_SNPs_18744 0 0 46 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62655908-62655935
64251 chr7 4796655 4796655 1 + C T CESC 4796673 + 4796653 4796693 41 ACCGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCT ACTGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCT < 41bp 1 0.107196766464089 1 0.0534426271915436 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796673 chr7:4796655 nonsynonymous SNV 1.000 5 3 hm5C_associated_SNPs_18745 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:4796624-4796656
64251 chr3 47046767 47046767 1 + C T CESC 47046776 + 47046756 47046796 41 TACCTCATCCGCGTGGAGCCCTTCACCTCCCTGCACGTCCA TACCTCATCCGTGTGGAGCCCTTCACCTCCCTGCACGTCCA < 41bp 1 0.217378066636128 1 0.301136195659637 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47046776 chr3:47046767 synonymous SNV . 0 12 hm5C_associated_SNPs_18746 0 0 5 BUD13 POSTAR2 ENCODE chr3:47046738-47046786
64251 chr10 116603647 116603647 1 + C T CESC 116603627 + 116603607 116603647 41 ACTGACAGACAGACTTGCCTCCCTGTACAAGGCCCTACCTC ACTGACAGACAGACTTGCCTCCCTGTACAAGGCCCTACCTT < 41bp 1 0.400361459836003 1 0.356354922056198 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116603627 chr10:116603647 stopgain 0.999 1 41 hm5C_associated_SNPs_18748 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:116603640-116603660
64251 chr20 62521244 62521244 1 + C T CESC 62521246 + 62521226 62521266 41 GAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG GAACGGCAGTGACAACCTTCCTTCCTCAGCGGGGAGTGGTG < 41bp 1 0.22456006147591 1 0.0657103061676025 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521246 chr20:62521244 synonymous SNV 0.046 0 19 hm5C_associated_SNPs_18749 0 0 1 TBRG4 POSTAR2 ENCODE chr20:62521205-62521257
64251 chr19 1278930 1278930 1 + G A CESC 1278943 + 1278923 1278963 41 CCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTG CCTTTTGAAACCTGCACAGCCCGCCGACCTGTTGCCACCTG < 41bp 1 0.429718564462645 1 0.250628471374512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278943 chr19:1278930 nonsynonymous SNV 0.002 0 8 hm5C_associated_SNPs_18750 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:1278905-1278932
64251 chr19 46026015 46026015 1 + G A CESC 46026006 + 46025986 46026026 41 CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGA CCTCAGGGGGGCCCACAGCCCCCAAAGCTAAGAGTGGTCGA < 41bp 1 0.605800628732258 1 0.403211891651154 experiment 0.788398742535484 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026006 chr19:46026015 nonsynonymous SNV 0.651 0 30 hm5C_associated_SNPs_18751 0 0 6 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr19 46026015 46026015 1 + G A CESC 46026007 + 46025987 46026027 41 CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAA CTCAGGGGGGCCCACAGCCCCCAAAGCTAAGAGTGGTCGAA < 41bp 1 0.36274536757629 1 0.2406947016716 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026007 chr19:46026015 nonsynonymous SNV 0.651 0 29 hm5C_associated_SNPs_18752 0 0 6 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr19 46026015 46026015 1 + G A CESC 46026008 + 46025988 46026028 41 TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAG TCAGGGGGGCCCACAGCCCCCAAAGCTAAGAGTGGTCGAAG < 41bp 1 0.492089694807072 1 0.610448360443115 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026008 chr19:46026015 nonsynonymous SNV 0.651 0 28 hm5C_associated_SNPs_18753 0 0 6 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr1 144014055 144014055 1 + C G CESC 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTGGAGAAGCTGGCAGAACGCTTGCTGGCCAAGACATGC < 41bp 1 0.267985582815682 1 0.248406410217285 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014055 . 0.780 2 26 hm5C_associated_SNPs_18754 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:144014041-144014061
64251 chr1 144014055 144014055 1 + C G CESC 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTGGAGAAGCTGGCAGAACGCTTGCTGGCCAAGACATGCAG < 41bp 1 0.389411353669805 1 0.473973959684372 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014055 . 0.780 2 24 hm5C_associated_SNPs_18755 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:144014041-144014061
64251 chr19 45375367 45375367 1 + G A CESC 45375373 + 45375353 45375393 41 AGCATGAGAGCTTCGAGGAACCAGCCCTGATACCTGTGACC AGCATGAGAGCTTCAAGGAACCAGCCCTGATACCTGTGACC < 41bp 1 0.0636318822190811 1 0.554713845252991 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375373 chr19:45375367 nonsynonymous SNV 0.751 0 15 hm5C_associated_SNPs_18757 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45375360-45375388
64251 chr19 45375367 45375367 1 + G A CESC 45375374 + 45375354 45375394 41 GCATGAGAGCTTCGAGGAACCAGCCCTGATACCTGTGACCC GCATGAGAGCTTCAAGGAACCAGCCCTGATACCTGTGACCC < 41bp 1 0.389442428133008 1 0.640723466873169 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375374 chr19:45375367 nonsynonymous SNV 0.751 0 14 hm5C_associated_SNPs_18758 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45375360-45375388
64251 chr19 2271912 2271912 1 + C G CESC 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTCTACATGGAGATCCCGGGCGGCGCGCTGCCCGAG < 41bp 1 0.73620620626854 1 0.856429398059845 experiment 0.527587587462921 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271912 nonsynonymous SNV 0.969 2 14 hm5C_associated_SNPs_18759 0 0 26 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:2271780-2271920
64251 chr8 95885647 95885647 1 + G A CESC 95885659 + 95885639 95885679 41 CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG CCAGGCAGAAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG < 41bp 1 0.548286351038588 1 0.183960735797882 experiment 0.903427297922824 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95885659 chr8:95885647 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_18760 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:95885631-95885667
64251 chr20 44571761 44571761 1 + C G CESC 44571747 + 44571727 44571767 41 GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCGC GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTGAACCGC < 41bp 1 0.35689408993787 1 0.521793127059937 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571747 chr20:44571761 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18761 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:44571761-44571762
64251 chr21 45733844 45733844 1 + C T CESC 45733862 + 45733842 45733882 41 TTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTT TTTATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTT < 41bp 1 0.719666196039286 1 0.854218006134033 experiment 0.560667607921428 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45733862 chr21:45733844 synonymous SNV . 0 3 hm5C_associated_SNPs_18763 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr21:45733843-45733844
64251 chr19 50335586 50335586 1 + C T CESC 50335577 + 50335557 50335597 41 TCCCGCAGACCACCCTGGGCCCTTTGTTCCGGAACTCAAGG TCCCGCAGACCACCCTGGGCCCTTTGTTCTGGAACTCAAGG < 41bp 1 0.0129100996088081 1 0.0129997432231903 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50335577 chr19:50335586 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_18764 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:50335582-50335620
64251 chr7 40102510 40102510 1 + G T CESC 40102521 + 40102501 40102541 41 CCAGCCATTGATGTATGGAGCTGTGGGTAAGATAGCCTTAT CCAGCCATTTATGTATGGAGCTGTGGGTAAGATAGCCTTAT < 41bp 1 0.207281433046638 1 0.372557938098907 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102521 chr7:40102510 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_18768 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:40102489-40102510
64251 chr13 76415797 76415797 1 + C G CESC 76415812 + 76415792 76415832 41 TGTCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAA TGTCTGTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAA < 41bp 1 0.0417250254812831 1 0.0341167151927948 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415812 chr13:76415797 nonsynonymous SNV 0.607 0 6 hm5C_associated_SNPs_18769 0 0 2 GRWD1 POSTAR2 ENCODE chr13:76415762-76415798
64251 chr13 76415797 76415797 1 + C G CESC 76415814 + 76415794 76415834 41 TCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAAGC TCTGTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAAGC < 41bp 1 0.222319084902163 1 0.122059613466263 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415814 chr13:76415797 nonsynonymous SNV 0.607 0 4 hm5C_associated_SNPs_18770 0 0 2 GRWD1 POSTAR2 ENCODE chr13:76415762-76415798
64251 chr7 16737784 16737784 1 + C T CESC 16737766 + 16737746 16737786 41 AATACTGCTACGACAACATCCATTTCATGAAAGCCTTTCAG AATACTGCTACGACAACATCCATTTCATGAAAGCCTTTTAG < 41bp 1 0.0573171470476517 1 0.230653554201126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16737766 chr7:16737784 stopgain 1.000 0 39 hm5C_associated_SNPs_18771 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:16737773-16737798
64251 chr7 155534643 155534643 1 + C G CESC 155534638 + 155534618 155534658 41 ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGC ATAGAAATGAGCAGCAGCCGCTGCTGTGCCACGCCCTCAGC < 41bp 1 0.555935241622286 1 0.154872715473175 experiment 0.888129516755428 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534638 chr7:155534643 nonsynonymous SNV 0.018 3 26 hm5C_associated_SNPs_18772 0 0 3 GRWD1 POSTAR2 ENCODE chr7:155534641-155534731
64251 chr2 232576627 232576627 1 + G C CESC 232576625 + 232576605 232576645 41 GGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGACGAAG GGAAAATGGGGAGCAGGAGGCTCACAATGAGGTAGACGAAG < 41bp 1 0.274461875227498 1 0.163092166185379 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576625 chr2:232576627 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_18773 0 0 76 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr2:232576620-232576640
64251 chr2 232576627 232576627 1 + G C CESC 232576641 + 232576621 232576661 41 GAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGG GAGGCTCACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGG < 41bp 1 0.489879295201845 1 0.373368680477142 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576641 chr2:232576627 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_18774 0 0 76 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr2:232576620-232576640
64251 chr7 157041173 157041173 1 + G A CESC 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGGACATTCACCACCTCGCCTCCCTAGACCCTAAGGTGTA < 41bp 1 0.304083163729617 1 0.410818576812744 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041173 nonsynonymous SNV 0.035 2 34 hm5C_associated_SNPs_18775 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:157041142-157041265
64251 chr2 241516041 241516041 1 + G C CESC 241516046 + 241516026 241516066 41 CTGACCCGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGC CTGACCCGGCCCGTGCAGGCCCTTTTCCAGCTGTGGACCGC < 41bp 1 0.0373050949569897 1 0.0211678147315979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241516046 chr2:241516041 nonsynonymous SNV 0.766 1 16 hm5C_associated_SNPs_18776 0 0 1 DDX3X POSTAR2 ENCODE chr2:241515983-241516059
64251 chr2 241516041 241516041 1 + G C CESC 241516052 + 241516032 241516072 41 CGGCCCGTGGAGGCCCTTTTCCAGCTGTGGACCGCAGAACC CGGCCCGTGCAGGCCCTTTTCCAGCTGTGGACCGCAGAACC < 41bp 1 0.46015279793541 1 0.743715524673462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241516052 chr2:241516041 nonsynonymous SNV 0.766 1 10 hm5C_associated_SNPs_18777 0 0 1 DDX3X POSTAR2 ENCODE chr2:241515983-241516059
64251 chr12 27933812 27933812 1 + G C CESC 27933800 + 27933780 27933820 41 CCCCAAGCTCCAGGGGATGTCAGCCTGAAGCAGAGGCTGAG CCCCAAGCTCCAGGGGATGTCAGCCTGAAGCACAGGCTGAG < 41bp 1 0.57997398386904 1 0.450631618499756 experiment 0.84005203226192 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933800 chr12:27933812 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_18778 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:27933800-27933820
64251 chr16 29993184 29993184 1 + G C CESC 29993182 + 29993162 29993202 41 CCCTCCTGTGACTTTCAGGTCTGAGTACTTCCGGAATTTTG CCCTCCTGTGACTTTCAGGTCTCAGTACTTCCGGAATTTTG < 41bp 1 0.274699289904619 1 0.134513914585114 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29993182 chr16:29993184 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_18787 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:29993180-29993200
64251 chr6 44197428 44197428 1 + G C CESC 44197431 + 44197411 44197451 41 CTGCAGCACCCTTGCCTGAGCGGAACTCTCTCAGTGCCATC CTGCAGCACCCTTGCCTCAGCGGAACTCTCTCAGTGCCATC < 41bp 1 0.736682951326805 1 0.384596586227417 experiment 0.52663409734639 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197431 chr6:44197428 nonsynonymous SNV 0.022 0 18 hm5C_associated_SNPs_18789 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr6:44197402-44197433
64251 chr19 54711421 54711421 1 + G C CESC 54711401 + 54711381 54711421 41 AGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGG AGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGC < 41bp 1 0.799821531279489 1 0.46652764081955 experiment 0.400356937441023 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711401 chr19:54711421 nonsynonymous SNV 0.947 1 41 hm5C_associated_SNPs_18795 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54711392-54711434
64251 chr11 8934037 8934037 1 + G C CESC 8934032 + 8934012 8934052 41 CCCCCAACCCTTAGTGCTTCCTTCAGAACAATGGCTGAATT CCCCCAACCCTTAGTGCTTCCTTCACAACAATGGCTGAATT < 41bp 1 0.411129454104965 1 0.380454123020172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8934032 chr11:8934037 nonsynonymous SNV 0.995 2 26 hm5C_associated_SNPs_18796 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:8934010-8934048
64251 chr2 173451093 173451093 1 + G C CESC 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCGTGTTCAGACCTCCCGCGCAGTGCCTCTGGT < 41bp 1 0.338453965739047 1 0.521596968173981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451093 nonsynonymous SNV 0.989 1 16 hm5C_associated_SNPs_18797 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr8 22064467 22064467 1 + C A CESC 22064464 + 22064444 22064484 41 AAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACCG AAGGAGTGCACGTGGGCCATCTCAAGCACCCCCGGGCACCG < 41bp 1 0.651132228971376 1 0.438963085412979 experiment 0.697735542057248 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064464 chr8:22064467 synonymous SNV . 0 24 hm5C_associated_SNPs_18798 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:22064444-22064479
64251 chr21 45483604 45483604 1 + G T CESC 45483598 + 45483578 45483618 41 TGCTGCTCTTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC TGCTGCTCTTCCTGCAGAGGCCGTGGTAGGTGGCCCAGCGC < 41bp 1 0.395432548722284 1 0.473667979240417 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45483598 chr21:45483604 stopgain 1.000 1 27 hm5C_associated_SNPs_18799 0 0 2 PPIG POSTAR2 ENCODE chr21:45483558-45483640
64251 chr3 169985710 169985710 1 + C G CESC 169985728 + 169985708 169985748 41 ATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTG ATGTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTG < 41bp 1 0.432656000437124 1 0.351053059101105 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169985728 chr3:169985710 nonsynonymous SNV 0.989 2 3 hm5C_associated_SNPs_18801 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:169985679-169985717
64251 chr2 3623257 3623257 1 + G C CESC 3623246 + 3623226 3623266 41 GAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCA GAAGCCCAATGGCGAGAAGCCGGACGAGTTCCAGTCCGGCA < 41bp 1 0.736348129195413 1 0.43370133638382 experiment 0.527303741609175 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3623246 chr2:3623257 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_18802 0 0 10 DDX3X POSTAR2 ENCODE chr2:3623251-3623275
64251 chr19 55899664 55899664 1 + G A CESC 55899674 + 55899654 55899694 41 CTGTGATGGTGAAGAGGAAGCGGACCCGCCCCACCAAGAGC CTGTGATGGTAAAGAGGAAGCGGACCCGCCCCACCAAGAGC < 41bp 1 0.606906821361098 1 0.44150173664093 experiment 0.786186357277805 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899674 chr19:55899664 synonymous SNV . 0 11 hm5C_associated_SNPs_18803 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:55899600-55899700
64251 chr10 75529389 75529389 1 + G T CESC 75529387 + 75529367 75529407 41 ATCCAGCATATCGGGGAGTCCTGAATAGCCCTGTGAAGGCT ATCCAGCATATCGGGGAGTCCTTAATAGCCCTGTGAAGGCT < 41bp 1 0.462932397462649 1 0.747394204139709 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529387 chr10:75529389 synonymous SNV . 0 23 hm5C_associated_SNPs_18804 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529374-75529394
64251 chr1 24022845 24022845 1 + C T CESC 24022848 + 24022828 24022868 41 TTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCC TTTCAGTATGATGGGATTATCCTTCCTGGCAAATAAATTCC < 41bp 1 0.0484657483222136 1 0.0435154736042023 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022848 chr1:24022845 synonymous SNV . 0 18 hm5C_associated_SNPs_18805 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24022842-24022870
64251 chr1 6681563 6681563 1 + C T CESC 6681570 + 6681550 6681590 41 CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT CCACACCTGGATTTACCTGTCCTGTGCGAAAATCCGGAAAT < 41bp 1 0.184671383509192 1 0.11658051609993 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681570 chr1:6681563 nonsynonymous SNV 1.000 5 14 hm5C_associated_SNPs_18806 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:6681530-6681564
64251 chrX 73046913 73046913 1 - C G CESC 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC CATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC < 41bp 1 0.178396795618392 1 0.404325097799301 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046913 . . 0 1 hm5C_associated_SNPs_18807 0 0 72 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73046913 73046913 1 - C G CESC 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG ACATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG < 41bp 1 0.433083711487988 1 0.139819502830505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046913 . . 0 2 hm5C_associated_SNPs_18808 0 0 72 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73046913 73046913 1 - C G CESC 73046915 - 73046895 73046935 41 AGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAGA AGAAGGCCCAAAGTATAAGACACATGGTTTGAGACTTGAGA < 41bp 1 0.128056206943049 1 0.118196040391922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046915 chrX:73046913 . . 0 23 hm5C_associated_SNPs_18809 0 0 72 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr17 57754406 57754406 1 + G C CESC 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG ATCTACATACACAGTAATAACAACCCGGAGAGATTTCTTCG < 41bp 1 0.237732669866332 1 0.129548519849777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754406 nonsynonymous SNV 0.999 4 10 hm5C_associated_SNPs_18811 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr19 4793205 4793205 1 + C G CESC 4793215 + 4793195 4793235 41 CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA CTACGTGCTTGAGGACCGGGCCGCCAAAGGCAGCCTGGGCA < 41bp 1 0.103349498164297 1 0.0882076621055603 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793215 chr19:4793205 nonsynonymous SNV 0.990 0 11 hm5C_associated_SNPs_18812 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4793141-4793239
64251 chr17 7810527 7810527 1 + G C CESC 7810511 + 7810491 7810531 41 GAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGCCAGAGAA GAGAAGGAGGAAGCTGAAAACCAGGAGGAAAAGCCACAGAA < 41bp 1 0.532115492228741 1 0.6708664894104 experiment 0.935769015542519 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810511 chr17:7810527 nonsynonymous SNV 0.996 3 37 hm5C_associated_SNPs_18813 0 0 4 YTHDF3 POSTAR2 GSE78030,GSM2064707 chr17:7810520-7810540
64251 chr17 7810527 7810527 1 + G C CESC 7810524 + 7810504 7810544 41 CTGAAAACCAGGAGGAAAAGCCAGAGAAGAACAGCAGAATT CTGAAAACCAGGAGGAAAAGCCACAGAAGAACAGCAGAATT < 41bp 1 0.33267358072032 1 0.414039313793182 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810524 chr17:7810527 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_18814 0 0 4 YTHDF3 POSTAR2 GSE78030,GSM2064707 chr17:7810520-7810540
64251 chr17 7810527 7810527 1 + G C CESC 7810525 + 7810505 7810545 41 TGAAAACCAGGAGGAAAAGCCAGAGAAGAACAGCAGAATTG TGAAAACCAGGAGGAAAAGCCACAGAAGAACAGCAGAATTG < 41bp 1 0.371307249744797 1 0.315534114837646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7810525 chr17:7810527 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_18815 0 0 4 YTHDF3 POSTAR2 GSE78030,GSM2064707 chr17:7810520-7810540
64251 chr4 2965765 2965765 1 + C G CESC 2965776 + 2965756 2965796 41 CCTCGGTCTCGCAGAATCCGCCGGCGGCGGCGGCGCCAGGA CCTCGGTCTGGCAGAATCCGCCGGCGGCGGCGGCGCCAGGA < 41bp 1 0.695548291111018 1 0.825613439083099 experiment 0.608903417777964 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRK4 ENSG00000125388 CDS Human protein_coding chr4:2965776 chr4:2965765 nonsynonymous SNV . 0 10 hm5C_associated_SNPs_18816 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:2965710-2965769
64251 chr11 65733421 65733421 1 + G A CESC 65733404 + 65733384 65733424 41 GGGCCTCACCGTGGAGCATGCCATTGATTCCTTCCGAGAAG GGGCCTCACCGTGGAGCATGCCATTGATTCCTTCCGAAAAG < 41bp 1 0.0775907954700059 1 0.101965039968491 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SART1 ENSG00000175467 CDS Human protein_coding chr11:65733404 chr11:65733421 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_18817 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65733383-65733421
64251 chrX 105855822 105855822 1 + G T CESC 105855825 + 105855805 105855845 41 AACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGA AACTCCCTTCAGAAATATAGCGCACCAGGAGAAACCAGAGA < 41bp 1 0.316968620573167 1 0.133949130773544 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855825 chrX:105855822 nonsynonymous SNV 0.992 1 18 hm5C_associated_SNPs_18818 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrX 105855822 105855822 1 + G T CESC 105855840 + 105855820 105855860 41 TAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG TATAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG < 41bp 1 0.776630159828557 1 0.668174505233765 experiment 0.446739680342885 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855840 chrX:105855822 nonsynonymous SNV 0.992 1 3 hm5C_associated_SNPs_18819 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chr6 43153911 43153911 1 + C T CESC 43153923 + 43153903 43153943 41 CGGAACCTCAGCGAACAGGGCATGTCACCTCCCCGGCCAAC CGGAACCTTAGCGAACAGGGCATGTCACCTCCCCGGCCAAC < 41bp 1 0.162069419884108 1 0.16309529542923 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CUL9 ENSG00000112659 CDS Human protein_coding chr6:43153923 chr6:43153911 synonymous SNV . 0 9 hm5C_associated_SNPs_18820 0 0 2 EIF3H POSTAR2 ENCODE chr6:43153787-43153951
64251 chr15 91419569 91419569 1 + C T CESC 91419579 + 91419559 91419599 41 CAGCCGGCTGCAGAGGGAGCCTCAAGTGAGTGTGGCCCCAG CAGCCGGCTGTAGAGGGAGCCTCAAGTGAGTGTGGCCCCAG < 41bp 1 0.758279864206907 1 0.637227535247803 experiment 0.483440271586185 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FURIN ENSG00000140564 CDS Human protein_coding chr15:91419579 chr15:91419569 stopgain 0.999 0 11 hm5C_associated_SNPs_18822 0 0 1 DHX30 POSTAR2 ENCODE chr15:91419563-91419577
64251 chr6 142519611 142519611 1 + C T CESC 142519603 + 142519583 142519623 41 AGAAAATGAAGATGCTGGAGCAGCCTCTCTGCCCACTCAGC AGAAAATGAAGATGCTGGAGCAGCCTCTTTGCCCACTCAGC < 41bp 1 0.307723065082631 1 0.215969890356064 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519603 chr6:142519611 synonymous SNV . 0 29 hm5C_associated_SNPs_18823 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:142519584-142519613
64251 chr2 74425838 74425838 1 + C G CESC 74425852 + 74425832 74425872 41 TCCCTTCGCCTTCGCCCTTTCCACCTCGCGGCAGTTCGGTA TCCCTTGGCCTTCGCCCTTTCCACCTCGCGGCAGTTCGGTA < 41bp 1 0.267900429788931 1 0.153401911258698 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74425852 chr2:74425838 nonsynonymous SNV 0.002 0 7 hm5C_associated_SNPs_18824 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74425713-74425863
64251 chr19 48833688 48833688 1 + C T CESC 48833670 + 48833650 48833690 41 TTCGCCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAG TTCGCCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTTAG < 41bp 1 0.306120147336297 1 0.030019998550415 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833670 chr19:48833688 stopgain 0.998 0 39 hm5C_associated_SNPs_18825 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr19 48833688 48833688 1 + C T CESC 48833674 + 48833654 48833694 41 CCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGC CCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTTAGCGGC < 41bp 1 0.49476107955088 1 0.190249770879745 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833674 chr19:48833688 stopgain 0.998 0 35 hm5C_associated_SNPs_18826 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr19 48833688 48833688 1 + C T CESC 48833679 + 48833659 48833699 41 GCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGCATCAT GCCTGGGTGGCCTTCCCCCTCGCCCTGGTTAGCGGCATCAT < 41bp 1 0.704338390809688 1 0.394280761480331 experiment 0.591323218380624 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833679 chr19:48833688 stopgain 0.998 0 30 hm5C_associated_SNPs_18827 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr9 136216849 136216849 1 + G A CESC 136216839 + 136216819 136216859 41 GAAGAAGCAGAGACTGTTGGCCCGGGCCGAGAAGAAGGCTG GAAGAAGCAGAGACTGTTGGCCCGGGCCGAAAAGAAGGCTG < 41bp 1 0.724099054447563 1 0.48987352848053 experiment 0.551801891104874 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216839 chr9:136216849 synonymous SNV . 0 31 hm5C_associated_SNPs_18828 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136216813-136216905
64251 chr9 136216849 136216849 1 + G A CESC 136216840 + 136216820 136216860 41 AAGAAGCAGAGACTGTTGGCCCGGGCCGAGAAGAAGGCTGC AAGAAGCAGAGACTGTTGGCCCGGGCCGAAAAGAAGGCTGC < 41bp 1 0.511423743820907 1 0.658650040626526 experiment 0.977152512358186 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216840 chr9:136216849 synonymous SNV . 0 30 hm5C_associated_SNPs_18829 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136216813-136216905
64251 chr9 136216849 136216849 1 + G A CESC 136216845 + 136216825 136216865 41 GCAGAGACTGTTGGCCCGGGCCGAGAAGAAGGCTGCTGGCA GCAGAGACTGTTGGCCCGGGCCGAAAAGAAGGCTGCTGGCA < 41bp 1 0.543465306837874 1 0.346510112285614 experiment 0.913069386324251 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216845 chr9:136216849 synonymous SNV . 0 25 hm5C_associated_SNPs_18830 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136216813-136216905
64251 chr9 136216849 136216849 1 + G A CESC 136216857 + 136216837 136216877 41 GGCCCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGTCC GGCCCGGGCCGAAAAGAAGGCTGCTGGCAAAGGGGACGTCC < 41bp 1 0.696106341002876 1 0.132033318281174 experiment 0.607787317994247 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216857 chr9:136216849 synonymous SNV . 0 13 hm5C_associated_SNPs_18831 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136216813-136216905
64251 chr9 136216849 136216849 1 + G A CESC 136216860 + 136216840 136216880 41 CCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGTCCCAA CCGGGCCGAAAAGAAGGCTGCTGGCAAAGGGGACGTCCCAA < 41bp 1 0.5720770802378 1 0.213141143321991 experiment 0.855845839524399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216860 chr9:136216849 synonymous SNV . 0 10 hm5C_associated_SNPs_18832 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136216813-136216905
64251 chr10 102685753 102685753 1 + G A CESC 102685745 + 102685725 102685765 41 CTTACACAAATACCTTAGAACGTCTAGTGAAGGAAATGGAA CTTACACAAATACCTTAGAACGTCTAGTAAAGGAAATGGAA < 41bp 1 0.0650650146700385 1 0.0724941492080688 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102685745 chr10:102685753 synonymous SNV . 0 29 hm5C_associated_SNPs_18833 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:102685714-102685760
64251 chr11 67049187 67049187 1 + G C CESC 67049189 + 67049169 67049209 41 AAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGTGCTG AAGCTCAGCTTCATCCTGCACCTCATGAACGGTGAGTGCTG < 41bp 1 0.169812089260696 1 0.0145429372787476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67049189 chr11:67049187 nonsynonymous SNV 0.986 4 19 hm5C_associated_SNPs_18834 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67049171-67049195
64251 chr5 112868672 112868672 1 + G A CESC 112868670 + 112868650 112868690 41 ATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGA ATTGGCAGCTATCGCTGTGGCTAAAAGAGTTGCCGCAGAGA < 41bp 1 0.714197932878226 1 0.571842670440674 experiment 0.571604134243548 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868670 chr5:112868672 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_18835 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868672 112868672 1 + G A CESC 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTAAAAGAGTTGCCGCAGAGAGACGGGAAAGGA < 41bp 1 0.505045783865088 1 0.0926721394062042 experiment 0.989908432269824 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868672 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_18836 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868672 112868672 1 + G A CESC 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTAAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT < 41bp 1 0.572305840408575 1 0.634931802749634 experiment 0.85538831918285 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868672 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_18837 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chrX 100880767 100880767 1 + C G CESC 100880750 + 100880730 100880770 41 CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTT CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACTGCTT < 41bp 1 0.567698216594038 1 0.302956610918045 experiment 0.864603566811923 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880750 chrX:100880767 synonymous SNV . 0 38 hm5C_associated_SNPs_18838 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880767 100880767 1 + C G CESC 100880753 + 100880733 100880773 41 GAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTTTTG GAAATGAAGAAACCAAACTTCAGGTTCTGAAACTGCTTTTG < 41bp 1 0.669209411190512 1 0.447276473045349 experiment 0.661581177618976 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880753 chrX:100880767 synonymous SNV . 0 35 hm5C_associated_SNPs_18839 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880767 100880767 1 + C G CESC 100880765 + 100880745 100880785 41 CCAAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAA CCAAACTTCAGGTTCTGAAACTGCTTTTGAATTTGGCTGAA < 41bp 1 0.603457076919039 1 0.141265511512756 experiment 0.793085846161922 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880765 chrX:100880767 synonymous SNV . 0 23 hm5C_associated_SNPs_18840 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880767 100880767 1 + C G CESC 100880781 + 100880761 100880801 41 GAAACTCCTTTTGAATTTGGCTGAAAATCCAGCCATGACTA GAAACTGCTTTTGAATTTGGCTGAAAATCCAGCCATGACTA < 41bp 1 0.696659368578117 1 0.348172903060913 experiment 0.606681262843766 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880781 chrX:100880767 synonymous SNV . 0 7 hm5C_associated_SNPs_18841 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chr22 29695785 29695785 1 + G C CESC 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGCCCCCTGGACCTTTCATGGAACAGATGGGAG < 41bp 1 0.197344992923853 1 0.201024532318115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695785 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_18842 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr1 44878382 44878382 1 + C G CESC 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATCGGGAAGCCTCATCTAGCCCAGAGGATGGGAATGACAGA < 41bp 1 0.454295949726071 1 0.295323401689529 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878382 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_18844 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr17 38318312 38318312 1 + G A CESC 38318298 + 38318278 38318318 41 CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATAATGATG < 41bp 1 0.185158863569658 1 0.0587791800498962 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318298 chr17:38318312 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_18845 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr17 38318312 38318312 1 + G A CESC 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGGTAAAAAGGGCCCTAAGCATTTGGATAATGATGAAGAT < 41bp 1 0.138879640809041 1 0.11624750494957 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318312 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_18846 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr2 242695372 242695372 1 + G A CESC 242695362 + 242695342 242695382 41 CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC CCTGTGGAGCGGCTCTACGACATCGTGACTAACCTGCGCGC < 41bp 1 0.578431961300662 1 0.210908502340317 experiment 0.843136077398676 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695362 chr2:242695372 nonsynonymous SNV 0.002 2 31 hm5C_associated_SNPs_18847 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:242695362-242695401
64251 chr17 33324841 33324841 1 + C T CESC 33324843 + 33324823 33324863 41 CTCAGAAATGAAGCGAGTCACAGTAAGTGAAGACCCTATGC CTCAGAAATGAAGCGAGTTACAGTAAGTGAAGACCCTATGC < 41bp 1 0.651576345263835 1 0.350120425224304 experiment 0.696847309472329 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33324843 chr17:33324841 synonymous SNV . 0 19 hm5C_associated_SNPs_18848 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:33324799-33324842
64251 chr16 56966267 56966267 1 + C G CESC 56966261 + 56966241 56966281 41 GACCGCGGCTGGAGTGTGGGCCACCTCAAGGCCCACCTGAG GACCGCGGCTGGAGTGTGGGCCACCTGAAGGCCCACCTGAG < 41bp 1 0.352140453252222 1 0.134180307388306 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966261 chr16:56966267 synonymous SNV . 0 27 hm5C_associated_SNPs_18850 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr16 56966267 56966267 1 + C G CESC 56966262 + 56966242 56966282 41 ACCGCGGCTGGAGTGTGGGCCACCTCAAGGCCCACCTGAGC ACCGCGGCTGGAGTGTGGGCCACCTGAAGGCCCACCTGAGC < 41bp 1 0.701622974090841 1 0.229670882225037 experiment 0.596754051818319 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966262 chr16:56966267 synonymous SNV . 0 26 hm5C_associated_SNPs_18851 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr16 56966267 56966267 1 + C G CESC 56966272 + 56966252 56966292 41 GAGTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACC GAGTGTGGGCCACCTGAAGGCCCACCTGAGCCGCGTCTACC < 41bp 1 0.284832205151123 1 0.101716995239258 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966272 chr16:56966267 synonymous SNV . 0 16 hm5C_associated_SNPs_18852 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr16 56966267 56966267 1 + C G CESC 56966273 + 56966253 56966293 41 AGTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCC AGTGTGGGCCACCTGAAGGCCCACCTGAGCCGCGTCTACCC < 41bp 1 0.388065748203246 1 0.111738502979279 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966273 chr16:56966267 synonymous SNV . 0 15 hm5C_associated_SNPs_18853 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr16 56966267 56966267 1 + C G CESC 56966274 + 56966254 56966294 41 GTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCCC GTGTGGGCCACCTGAAGGCCCACCTGAGCCGCGTCTACCCC < 41bp 1 0.721534410030123 1 0.072087287902832 experiment 0.556931179939753 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966274 chr16:56966267 synonymous SNV . 0 14 hm5C_associated_SNPs_18854 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr3 169496595 169496595 1 + C G CESC 169496589 + 169496569 169496609 41 GAAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGT GAAATTCATCAGGCTGCTGACTATCTGAAAGTGGAAGAGGT < 41bp 1 0.135919596886543 1 0.076798141002655 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MYNN ENSG00000085274 CDS Human protein_coding chr3:169496589 chr3:169496595 synonymous SNV . 0 27 hm5C_associated_SNPs_18855 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:169496560-169496603
64251 chr1 39910438 39910438 1 + G C CESC 39910457 + 39910437 39910477 41 AGACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT ACACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT < 41bp 1 0.0622699904160357 1 0.0521182715892792 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910457 chr1:39910438 nonsynonymous SNV 0.991 2 2 hm5C_associated_SNPs_18856 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39910415-39910438
64251 chr1 180849254 180849254 1 + G C CESC 180849252 + 180849232 180849272 41 TCCGCCTGGAGAATGAACATCTGAATAACTGTGGTGAATTC TCCGCCTGGAGAATGAACATCTCAATAACTGTGGTGAATTC < 41bp 1 0.643724358285177 1 0.82267838716507 experiment 0.712551283429646 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180849252 chr1:180849254 synonymous SNV . 0 23 hm5C_associated_SNPs_18857 0 0 8 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:180849212-180849262
64251 chr11 6631719 6631719 1 + C T CESC 6631708 + 6631688 6631728 41 CGCAGGTGGCATTGGAAGGCCTTCGGCCTACCATCCCACCA CGCAGGTGGCATTGGAAGGCCTTCGGCCTACTATCCCACCA < 41bp 1 0.341365170307705 1 0.394572556018829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631708 chr11:6631719 synonymous SNV . 0 32 hm5C_associated_SNPs_18860 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:6631709-6631729
64251 chr17 30692357 30692357 1 + C T CESC 30692372 + 30692352 30692392 41 TGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT TGCCCTCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT < 41bp 1 0.252474807711144 1 0.236514180898666 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692372 chr17:30692357 nonsynonymous SNV 0.930 3 6 hm5C_associated_SNPs_18861 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr14 24707984 24707984 1 + G T CESC 24707977 + 24707957 24707997 41 GAATCCAATCTTCAGTGAGGCGTGCTAGACCTGAGCAGTTC GAATCCAATCTTCAGTGAGGCGTGCTATACCTGAGCAGTTC < 41bp 1 0.420372096565359 1 0.214963465929031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPR2 ENSG00000100938 CDS Human protein_coding chr14:24707977 chr14:24707984 stoploss 0.066 0 28 hm5C_associated_SNPs_18862 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr14:24707962-24708014
64251 chr8 26505266 26505266 1 + A C CESC 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCCTCT < 41bp 1 0.186766350008819 1 0.208471059799194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505266 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_18863 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505257-26505284
64251 chr6 168363158 168363158 1 + C T CESC 168363160 + 168363140 168363180 41 CAGCAGTTAGAAGAGATGCGCAAGCGGGAAGCGGAAGACCG CAGCAGTTAGAAGAGATGTGCAAGCGGGAAGCGGAAGACCG < 41bp 1 0.292409086334136 1 0.486234545707703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363160 chr6:168363158 nonsynonymous SNV 0.849 3 19 hm5C_associated_SNPs_18864 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221661 chr6:168363158-168363159
64251 chr4 1346949 1346949 1 + C T CESC 1346962 + 1346942 1346982 41 TGCCCTTCGCTCCTCCTGCGCGGGCCAGGTGGGCCCCTGCC TGCCCTTTGCTCCTCCTGCGCGGGCCAGGTGGGCCCCTGCC < 41bp 1 0.724520125589942 1 0.902969241142273 experiment 0.550959748820116 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UVSSA ENSG00000163945 CDS Human protein_coding chr4:1346962 chr4:1346949 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_18867 0 0 1 GRWD1 POSTAR2 ENCODE chr4:1346937-1347039
64251 chr19 18053578 18053578 1 + G A CESC 18053574 + 18053554 18053594 41 CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC CGGCAAGGCGCCGCGGGTGGCCACATCCAGCAAGGTCACCC < 41bp 1 0.508509038670453 1 0.0952799618244171 experiment 0.982981922659094 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053574 chr19:18053578 synonymous SNV . 0 25 hm5C_associated_SNPs_18868 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr19 18053578 18053578 1 + G A CESC 18053575 + 18053555 18053595 41 GGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCCG GGCAAGGCGCCGCGGGTGGCCACATCCAGCAAGGTCACCCG < 41bp 1 0.516478245425661 1 0.754170060157776 experiment 0.967043509148678 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053575 chr19:18053578 synonymous SNV . 0 24 hm5C_associated_SNPs_18869 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr9 96411458 96411458 1 + T C CESC 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GCACCAACCGCAAGCGGGCCCTCAACGTCACCAACCTCGAG < 41bp 1 0.509255986770788 1 0.202339798212051 experiment 0.981488026458424 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411458 nonsynonymous SNV 0.995 4 19 hm5C_associated_SNPs_18870 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chr16 22337243 22337243 1 + G A CESC 22337234 + 22337214 22337254 41 GTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAG GTGTGCGGATCAAGGAGGAGCCCGTGAGCAAGGAGGGCGAG < 41bp 1 0.511034299282541 1 0.22044762969017 experiment 0.977931401434919 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337234 chr16:22337243 nonsynonymous SNV 0.872 1 30 hm5C_associated_SNPs_18871 0 0 9 PPIG POSTAR2 ENCODE chr16:22337134-22337258
64251 chr16 22337243 22337243 1 + G A CESC 22337235 + 22337215 22337255 41 TGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGG TGTGCGGATCAAGGAGGAGCCCGTGAGCAAGGAGGGCGAGG < 41bp 1 0.326910807892664 1 0.262722492218018 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337235 chr16:22337243 nonsynonymous SNV 0.872 1 29 hm5C_associated_SNPs_18872 0 0 9 PPIG POSTAR2 ENCODE chr16:22337134-22337258
64251 chr21 47986589 47986589 1 + G A CESC 47986588 + 47986568 47986608 41 ATCCGAGCACACAGGAGCATCGCTGAGTGGTAAGAGCCCAG ATCCGAGCACACAGGAGCATCACTGAGTGGTAAGAGCCCAG < 41bp 1 0.318059058968809 1 0.159271121025085 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47986588 chr21:47986589 nonsynonymous SNV 0.972 2 22 hm5C_associated_SNPs_18874 0 0 1 PPIG POSTAR2 ENCODE chr21:47986560-47986591
64251 chr21 47754526 47754526 1 + C T CESC 47754537 + 47754517 47754557 41 GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATGT GTTCACAGTTAGTGACCACCCACCAGAACAGCGTGGGATGT < 41bp 1 0.65717392636575 1 0.445915818214417 experiment 0.6856521472685 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47754537 chr21:47754526 synonymous SNV . 0 10 hm5C_associated_SNPs_18886 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr21:47754526-47754527
64251 chr5 65350661 65350661 1 + G C CESC 65350670 + 65350650 65350690 41 TCCTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGCATT TCCTTCAAAAACACCAAATGCAAGGGTTGGTTCTGAGCATT < 41bp 1 0.569451936520636 1 0.490462839603424 experiment 0.861096126958728 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65350670 chr5:65350661 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_18887 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65350594-65350677
64251 chr7 150737370 150737370 1 + C G CESC 150737364 + 150737344 150737384 41 TTTTCTGACAGGTCCATGGCCAACCTCTCTGTCCTGTTTGG TTTTCTGACAGGTCCATGGCCAACCTGTCTGTCCTGTTTGG < 41bp 1 0.190017851119941 1 0.0182360410690308 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150737364 chr7:150737370 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_18889 0 0 1 SF3B4 POSTAR2 ENCODE chr7:150737320-150737373
64251 chr19 806433 806433 1 + C T CESC 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAACGTCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGG < 41bp 1 0.282529541906051 1 0.0362357199192047 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806433 synonymous SNV . 0 13 hm5C_associated_SNPs_18891 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGTCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGC < 41bp 1 0.312038218666627 1 0.0711410641670227 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806433 synonymous SNV . 0 12 hm5C_associated_SNPs_18892 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCG < 41bp 1 0.430243112800745 1 0.0240912139415741 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806433 synonymous SNV . 0 11 hm5C_associated_SNPs_18893 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG < 41bp 1 0.51900360473638 1 0.267359524965286 experiment 0.961992790527241 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806433 synonymous SNV . 0 10 hm5C_associated_SNPs_18894 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC < 41bp 1 0.530394065804957 1 0.326674073934555 experiment 0.939211868390087 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806433 synonymous SNV . 0 9 hm5C_associated_SNPs_18895 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCACGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG < 41bp 1 0.780480445138258 1 0.447064697742462 experiment 0.439039109723484 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806433 synonymous SNV . 0 8 hm5C_associated_SNPs_18896 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG < 41bp 1 0.0706006196808606 1 0.164982169866562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806433 synonymous SNV . 0 4 hm5C_associated_SNPs_18897 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806433 806433 1 + C T CESC 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGTGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC < 41bp 1 0.217123267262963 1 0.0813136398792267 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806433 synonymous SNV . 0 3 hm5C_associated_SNPs_18898 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr17 65822382 65822382 1 + A G CESC 65822366 + 65822346 65822386 41 ACGACGATGACTCCGATTATCCGGAGGAGATGGAAGACGAC ACGACGATGACTCCGATTATCCGGAGGAGATGGAAGGCGAC < 41bp 1 0.739167349596931 1 0.864122450351715 experiment 0.521665300806137 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822366 chr17:65822382 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_18899 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:65822313-65822407
64251 chr4 7026927 7026927 1 + G A CESC 7026933 + 7026913 7026953 41 AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACG AGGACCTGCCCGCCAAGGAGCTGTTTGCCTCCATCGCCACG < 41bp 1 0.21945569784386 1 0.0218005776405334 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026933 chr4:7026927 nonsynonymous SNV 0.788 0 15 hm5C_associated_SNPs_18901 0 0 1 FXR2 POSTAR2 ENCODE chr4:7026900-7026957
64251 chr7 154720379 154720379 1 + G A CESC 154720373 + 154720353 154720393 41 GCCCGTATGTCTGGTGAAGTCAGTTGGATGCAAGCAGTTTG GCCCGTATGTCTGGTGAAGTCAGTTGAATGCAAGCAGTTTG < 41bp 1 0.639295739681456 1 0.648983001708984 experiment 0.721408520637089 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PAXIP1-AS2 ENSG00000214106 CDS Human antisense chr7:154720373 chr7:154720379 stopgain . 0 27 hm5C_associated_SNPs_18904 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:154720348-154720386
64251 chr14 60591555 60591555 1 + G A CESC 60591543 + 60591523 60591563 41 AGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG AGTTCTATTAGGATACCCTGCTGTTGACAAAGAAAAACAAG < 41bp 1 0.182887416996614 1 0.230573356151581 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591543 chr14:60591555 nonsynonymous SNV 0.964 4 33 hm5C_associated_SNPs_18906 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:60591520-60591560
64251 chr19 47111774 47111774 1 + A T CESC 47111772 + 47111752 47111792 41 TGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGA TGACTTCCCGGAGTTCCTGACCTTGATGGCCAGAAAGATGA < 41bp 1 0.0422204423293185 1 0.0439402759075165 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111772 chr19:47111774 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_18907 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111774 47111774 1 + A T CESC 47111782 + 47111762 47111802 41 GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGA GAGTTCCTGACCTTGATGGCCAGAAAGATGAAGGACACAGA < 41bp 1 0.577228471746535 1 0.737078666687012 experiment 0.845543056506931 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111782 chr19:47111774 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_18908 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr5 21491503 21491503 1 + A C CESC 21491518 + 21491498 21491538 41 TCAGAAAACAAAGTCGTGGACAACCAGGCTGGGACCCAGGG TCAGACAACAAAGTCGTGGACAACCAGGCTGGGACCCAGGG < 41bp 1 0.140223121001934 1 0.088182270526886 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21491518 chr5:21491503 . . 0 6 hm5C_associated_SNPs_18909 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr5:21491463-21491506
64251 chr16 67006823 67006823 1 + C G CESC 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTCAACCAGGCGGAACAATATCTGGAGATGAACCCA < 41bp 1 0.254649301029406 1 0.422655344009399 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006823 nonsynonymous SNV 0.000 2 35 hm5C_associated_SNPs_18910 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr12 56214128 56214128 1 + G A CESC 56214120 + 56214100 56214140 41 CAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAG CAGCCTCATTGCTAAGTGTACTGCTGCCAAAGTTGCCCCAG < 41bp 1 0.699974035798595 1 0.320162653923035 experiment 0.600051928402811 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214120 chr12:56214128 synonymous SNV . 0 29 hm5C_associated_SNPs_18913 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:56214095-56214128
64251 chr12 56214128 56214128 1 + G A CESC 56214123 + 56214103 56214143 41 CCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTC CCTCATTGCTAAGTGTACTGCTGCCAAAGTTGCCCCAGTTC < 41bp 1 0.505334464887326 1 0.200903326272964 experiment 0.989331070225347 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214123 chr12:56214128 synonymous SNV . 0 26 hm5C_associated_SNPs_18914 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:56214095-56214128
64251 chr8 30332338 30332338 1 + C A CESC 30332319 + 30332299 30332339 41 GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACAT < 41bp 1 0.0753779296155367 1 0.0503045320510864 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBPMS ENSG00000157110 CDS Human protein_coding chr8:30332319 chr8:30332338 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_18915 0 0 13 HNRNPD POSTAR2 GSE52971,GSM1279665 chr8:30332300-30332340
64251 chr1 181058909 181058909 1 + G T CESC 181058893 + 181058873 181058913 41 GGACTCCTACGGAAAAGCCCCGGGGGCGGCAGAGAGGAAGA GGACTCCTACGGAAAAGCCCCGGGGGCGGCAGAGAGTAAGA < 41bp 1 0.771291400902868 1 0.895653128623962 experiment 0.457417198194263 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout IER5 ENSG00000162783 CDS Human protein_coding chr1:181058893 chr1:181058909 stopgain 0.976 0 37 hm5C_associated_SNPs_18916 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:181058909-181058936
64251 chr1 181058909 181058909 1 + G T CESC 181058899 + 181058879 181058919 41 CTACGGAAAAGCCCCGGGGGCGGCAGAGAGGAAGAGGAGGG CTACGGAAAAGCCCCGGGGGCGGCAGAGAGTAAGAGGAGGG < 41bp 1 0.75577604978657 1 0.479105800390244 experiment 0.488447900426861 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout IER5 ENSG00000162783 CDS Human protein_coding chr1:181058899 chr1:181058909 stopgain 0.976 0 31 hm5C_associated_SNPs_18917 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:181058909-181058936
64251 chr16 75682407 75682407 1 + C G CESC 75682389 + 75682369 75682409 41 CTGGGGGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTCAA CTGGGGGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTGAA < 41bp 1 0.292859196115044 1 0.064107209444046 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75682389 chr16:75682407 synonymous SNV . 0 39 hm5C_associated_SNPs_18923 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:75682406-75682407
64251 chr16 75682407 75682407 1 + C G CESC 75682394 + 75682374 75682414 41 GGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTCAAGCGGA GGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTGAAGCGGA < 41bp 1 0.087707239245096 1 0.551478385925293 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75682394 chr16:75682407 synonymous SNV . 0 34 hm5C_associated_SNPs_18924 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:75682406-75682407
64251 chr11 62553746 62553746 1 + C T CESC 62553759 + 62553739 62553779 41 AACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAAC AACGAGTTCTGTACCCACACCTGTCCACCTACTGGACAAAC < 41bp 1 0.0617355792250196 1 0.0974876582622528 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62553759 chr11:62553746 synonymous SNV . 0 8 hm5C_associated_SNPs_18925 0 0 1 PPIG POSTAR2 ENCODE chr11:62553731-62553753
64251 chrX 73046776 73046776 1 - C T CESC 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTAAGTTGGATGGAAGTCTC < 41bp 1 0.176544666559504 1 0.621666371822357 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046776 . . 0 24 hm5C_associated_SNPs_18929 0 0 94 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046776 73046776 1 - C T CESC 73046786 - 73046766 73046806 41 AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGG AGAGGGTGGCCTGAATTGGACCGAAGGCCTAAGTTGGATGG < 41bp 1 0.369674782234892 1 0.159264743328094 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046786 chrX:73046776 . . 0 31 hm5C_associated_SNPs_18930 0 0 94 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr7 128486419 128486419 1 + C T CESC 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGTGTGACC < 41bp 1 0.0220800264672262 1 0.0259375870227814 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486419 synonymous SNV . 0 35 hm5C_associated_SNPs_18932 0 0 7 FMR1 POSTAR2 ENCODE chr7:128486383-128486481
64251 chrX 48759680 48759680 1 + C A CESC 48759667 + 48759647 48759687 41 CGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACAG CGTGGCTATGACAAGGTAGACAGAGAGAGAGAGAGAGACAG < 41bp 1 0.768358098820279 1 0.63315623998642 experiment 0.463283802359443 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759667 chrX:48759680 synonymous SNV . 0 34 hm5C_associated_SNPs_18933 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr9 106874063 106874063 1 + G C CESC 106874053 + 106874033 106874073 41 CTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA CTTGCTGGTCAAATGATGGCCTGTAAAAATCATATAAGTAA < 41bp 1 0.425022838414563 1 0.191385060548782 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106874053 chr9:106874063 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_18934 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:106874044-106874065
64251 chr1 45218872 45218872 1 + G C CESC 45218862 + 45218842 45218882 41 ATACCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGT ATACCATTGAGGATGGTCAGCGAGGAGATGCAAGAGCAAGT < 41bp 1 0.605742352013975 1 0.54876697063446 experiment 0.788515295972051 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218862 chr1:45218872 nonsynonymous SNV 0.943 0 31 hm5C_associated_SNPs_18935 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr14 61201637 61201637 1 + G A CESC 61201633 + 61201613 61201653 41 CACCAAATATCGGAACCCCTCCTTGAAGCTGATGGTGAATG CACCAAATATCGGAACCCCTCCTTAAAGCTGATGGTGAATG < 41bp 1 0.202350661688183 1 0.193663597106934 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61201633 chr14:61201637 synonymous SNV . 0 25 hm5C_associated_SNPs_18936 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:61201580-61201640
64251 chr12 95694220 95694220 1 + G T CESC 95694232 + 95694212 95694252 41 AGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCA AGCAGATGTAAGTGGTCTGACCACTGCCCCTCCAACTCCCA < 41bp 1 0.309182797162528 1 0.177170604467392 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95694232 chr12:95694220 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_18937 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:95694220-95694240
64251 chr16 87723265 87723265 1 + G C CESC 87723254 + 87723234 87723274 41 TCTTGTGTCCCCATACAGGGCTGGAGTACCAGAGGCCGAAG TCTTGTGTCCCCATACAGGGCTGGAGTACCACAGGCCGAAG < 41bp 1 0.766843638277627 1 0.671821534633636 experiment 0.466312723444746 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JPH3 ENSG00000154118 CDS Human protein_coding chr16:87723254 chr16:87723265 nonsynonymous SNV 0.874 3 32 hm5C_associated_SNPs_18939 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:87723263-87723293
64251 chr8 145139176 145139176 1 + C T CESC 145139185 + 145139165 145139205 41 CTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAAGG CTTGACCTGCTTAATCTCTTCCAGACCTTCTGCCAGAAAGG < 41bp 1 0.476528410318516 1 0.266349792480469 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139185 chr8:145139176 synonymous SNV . 0 12 hm5C_associated_SNPs_18940 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145139138-145139176
64251 chr11 610312 610312 1 + C T CESC 610293 + 610273 610313 41 CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTTC < 41bp 1 0.0301514485853676 1 0.0246386528015137 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610293 chr11:610312 nonsynonymous SNV 0.021 0 40 hm5C_associated_SNPs_18941 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:610303-610315
64251 chr16 16228308 16228308 1 + C T CESC 16228293 + 16228273 16228313 41 GAGTCTGCCGAAGGAGAGATCATCATCGATGGCATCAACAT GAGTCTGCCGAAGGAGAGATCATCATCGATGGCATTAACAT < 41bp 1 0.290880579834058 1 0.0588373839855194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16228293 chr16:16228308 synonymous SNV . 0 36 hm5C_associated_SNPs_18942 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr16:16228287-16228311
64251 chr6 3152763 3152763 1 + G A CESC 3152743 + 3152723 3152763 41 CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCG CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCA < 41bp 1 0.114808679517537 1 0.448444217443466 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BPHL ENSG00000137274 CDS Human protein_coding chr6:3152743 chr6:3152763 nonsynonymous SNV 0.987 4 41 hm5C_associated_SNPs_18943 0 0 1 PPIG POSTAR2 ENCODE chr6:3152719-3152808
64251 chr19 10812884 10812884 1 + G C CESC 10812865 + 10812845 10812885 41 GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGAGA GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGACA < 41bp 1 0.181239987484996 1 0.04639932513237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812865 chr19:10812884 nonsynonymous SNV 0.815 0 40 hm5C_associated_SNPs_18944 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:10812871-10812912
64251 chr17 37360887 37360887 1 + G A CESC 37360876 + 37360856 37360896 41 GGAGATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA GGAGATCATCAAGACTTTATCCAAGGAGGAAAAGACCAAGA < 41bp 1 0.49490170672895 1 0.807858347892761 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360876 chr17:37360887 nonsynonymous SNV 0.997 3 32 hm5C_associated_SNPs_18945 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr13 76414531 76414531 1 + C T CESC 76414530 + 76414510 76414550 41 CTCTGATAACTGGTTAGCTTCCAGTTCCAACCATCAGTGCC CTCTGATAACTGGTTAGCTTCTAGTTCCAACCATCAGTGCC < 41bp 1 0.432087844721195 1 0.156889468431473 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76414530 chr13:76414531 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_18946 0 0 3 BUD13 POSTAR2 ENCODE chr13:76414517-76414642
64251 chr2 173334029 173334029 1 + C T CESC 173334009 + 173333989 173334029 41 GTGATGGGCGATTGAGAGGCCATGAGAAATTTGGCTCTTGC GTGATGGGCGATTGAGAGGCCATGAGAAATTTGGCTCTTGT < 41bp 1 0.540000438950351 1 0.437431335449219 experiment 0.919999122099298 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173334009 chr2:173334029 synonymous SNV . 0 41 hm5C_associated_SNPs_18947 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:173334014-173334047
64251 chr9 96398787 96398787 1 + G A CESC 96398804 + 96398784 96398824 41 GCTGCGGAGCCGGACCTTTCCCAGGTGGGCTGGCCTTCCTG GCTACGGAGCCGGACCTTTCCCAGGTGGGCTGGCCTTCCTG < 41bp 1 0.764927087417173 1 0.786829113960266 experiment 0.470145825165653 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96398804 chr9:96398787 synonymous SNV . 0 4 hm5C_associated_SNPs_18948 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:96398759-96398796
64251 chr4 1730411 1730411 1 + G A CESC 1730416 + 1730396 1730436 41 AAGTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAGCCCTGA AAGTCTGGTTGCAGTAAGGCCCAGCCCCCAGAAAGCCCTGA < 41bp 1 0.0875399966942206 1 0.330653071403503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730416 chr4:1730411 nonsynonymous SNV 0.000 0 16 hm5C_associated_SNPs_18950 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:1730337-1730428
64251 chr13 113729377 113729377 1 + C T CESC 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCACTATGCGGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.648374047668475 1 0.867423892021179 experiment 0.703251904663051 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729377 synonymous SNV . 0 12 hm5C_associated_SNPs_18951 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chr1 171535871 171535871 1 + C T CESC 171535864 + 171535844 171535884 41 ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACAGATC ACAAGAGAAACCAAGCCCAGCTACAGTTAGAAGCACAGATC < 41bp 1 0.439081930464867 1 0.514618515968323 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171535864 chr1:171535871 synonymous SNV . 0 28 hm5C_associated_SNPs_18952 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171535819-171535894
64251 chr16 29828302 29828302 1 + G A CESC 29828289 + 29828269 29828309 41 CCAGAGCGAAGAGGAGAGATCCGATGAGGAGCCGGAGGCCA CCAGAGCGAAGAGGAGAGATCCGATGAGGAGCCAGAGGCCA < 41bp 1 0.476527953299132 1 0.145058065652847 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828289 chr16:29828302 synonymous SNV . 0 34 hm5C_associated_SNPs_18953 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828302 29828302 1 + G A CESC 29828300 + 29828280 29828320 41 AGGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAA AGGAGAGATCCGATGAGGAGCCAGAGGCCAAAGAAGAGGAA < 41bp 1 0.531813233023981 1 0.456775218248367 experiment 0.936373533952038 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828300 chr16:29828302 synonymous SNV . 0 23 hm5C_associated_SNPs_18954 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828302 29828302 1 + G A CESC 29828301 + 29828281 29828321 41 GGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAG GGAGAGATCCGATGAGGAGCCAGAGGCCAAAGAAGAGGAAG < 41bp 1 0.700109582050768 1 0.813240528106689 experiment 0.599780835898465 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828301 chr16:29828302 synonymous SNV . 0 22 hm5C_associated_SNPs_18955 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr16 29828302 29828302 1 + G A CESC 29828307 + 29828287 29828327 41 ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA ATCCGATGAGGAGCCAGAGGCCAAAGAAGAGGAAGAGGAAA < 41bp 1 0.385064400959298 1 0.581096827983856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828307 chr16:29828302 synonymous SNV . 0 16 hm5C_associated_SNPs_18956 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828274-29828308
64251 chr9 135929311 135929311 1 + C T CESC 135929296 + 135929276 135929316 41 ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCCGTTGT ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCTGTTGT < 41bp 1 0.724094991434961 1 0.940017342567444 experiment 0.551810017130078 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929296 chr9:135929311 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_18957 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:135929288-135929320
64251 chr16 30779676 30779676 1 + C T CESC 30779681 + 30779661 30779701 41 CAGGGCCCTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCC CAGGGCCCTTCCTCCTGGGGCCGAGAACCTGAGGCCAGGCC < 41bp 1 0.166787686439641 1 0.165430068969727 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779681 chr16:30779676 nonsynonymous SNV 0.954 4 16 hm5C_associated_SNPs_18958 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30779646-30779685
64251 chr11 309130 309130 1 + A G CESC 309126 + 309106 309146 41 ATCTTCATGACCATTCTGCTCATCATCATCCCAGTGTTGGT ATCTTCATGACCATTCTGCTCATCGTCATCCCAGTGTTGGT < 41bp 1 0.318748798640032 1 0.0223671197891235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFITM2 ENSG00000185201 CDS Human protein_coding chr11:309126 chr11:309130 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_18959 0 0 6 LARP4 POSTAR2 ENCODE chr11:309105-309176
64251 chr1 6505917 6505917 1 + A G CESC 6505928 + 6505908 6505948 41 GCCTCCTGTAGGACCACAGGCAGCTGACATCTACATGCAGA GCCTCCTGTGGGACCACAGGCAGCTGACATCTACATGCAGA < 41bp 1 0.363882265794504 1 0.531965255737305 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESPN ENSG00000187017 CDS Human protein_coding chr1:6505928 chr1:6505917 synonymous SNV . 0 10 hm5C_associated_SNPs_18960 0 0 2 DDX24 POSTAR2 ENCODE chr1:6505890-6505952
64251 chr20 47896949 47896949 1 + G C CESC 47896942 + 47896922 47896962 41 GCCAGTTTCTGTCTGATATGCCAGCTTGAGCAGCTCCTTTG GCCAGTTTCTGTCTGATATGCCAGCTTCAGCAGCTCCTTTG < 41bp 1 0.219573916804536 1 0.136506855487823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD12B ENSG00000177410 ncRNA_intronic Human antisense chr20:47896942 chr20:47896949 . . 0 28 hm5C_associated_SNPs_18961 0 0 7 FBL POSTAR2 GSE43666,GSM1067865 chr20:47896859-47896956
64251 chr3 158015851 158015851 1 + G A CESC 158015833 + 158015813 158015853 41 ACTCTTCTATTTTAGGGAATCTGGAAACATCAAAGCTGGAT ACTCTTCTATTTTAGGGAATCTGGAAACATCAAAGCTGAAT < 41bp 1 0.70049749198477 1 0.734894514083862 experiment 0.599005016030461 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:158015833 chr3:158015851 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_18962 0 0 11 BUD13 POSTAR2 ENCODE chr3:158015823-158015865
64251 chrX 47063090 47063090 1 + G A CESC 47063072 + 47063052 47063092 41 CAAATCTGAATCGACAGTTTCTTTTCCGGCCCTGGGATGTC CAAATCTGAATCGACAGTTTCTTTTCCGGCCCTGGGATATC < 41bp 1 0.0335875435124333 1 0.0119623839855194 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47063072 chrX:47063090 nonsynonymous SNV 0.999 1 39 hm5C_associated_SNPs_18964 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chrX:47063060-47063093
64251 chr1 201970613 201970613 1 + C G CESC 201970604 + 201970584 201970624 41 GGTGATCAGGATCAGTTTGACAGTTTTCTCAAGGTATAGTC GGTGATCAGGATCAGTTTGACAGTTTTCTGAAGGTATAGTC < 41bp 1 0.41875779561551 1 0.143868148326874 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201970604 chr1:201970613 synonymous SNV . 0 30 hm5C_associated_SNPs_18966 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:201970587-201970614
64251 chr11 46403634 46403634 1 + C A CESC 46403637 + 46403617 46403657 41 CGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCT CGAGGCTTCCTCCTCCTAACCCTCCTCGCCCTGCTGGCGCT < 41bp 1 0.0729340471761978 1 0.131347745656967 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403637 chr11:46403634 synonymous SNV . 0 18 hm5C_associated_SNPs_18967 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403634 46403634 1 + C A CESC 46403638 + 46403618 46403658 41 GAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTC GAGGCTTCCTCCTCCTAACCCTCCTCGCCCTGCTGGCGCTC < 41bp 1 0.506667173844755 1 0.554145395755768 experiment 0.986665652310489 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403638 chr11:46403634 synonymous SNV . 0 17 hm5C_associated_SNPs_18968 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403634 46403634 1 + C A CESC 46403643 + 46403623 46403663 41 TTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTC TTCCTCCTCCTAACCCTCCTCGCCCTGCTGGCGCTCACCTC < 41bp 1 0.526895882647763 1 0.700423359870911 experiment 0.946208234704473 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403643 chr11:46403634 synonymous SNV . 0 12 hm5C_associated_SNPs_18969 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr4 79420917 79420917 1 + A C CESC 79420912 + 79420892 79420932 41 GAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGA GAAGAAGCTGCATACCAAGTCCGGGCACCCGCAGGCCCAGA < 41bp 1 0.18943849298484 1 0.593769907951355 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79420912 chr4:79420917 nonsynonymous SNV 0.934 3 26 hm5C_associated_SNPs_18971 0 0 1 EIF3H POSTAR2 ENCODE chr4:79420887-79420932
64251 chr20 33764025 33764025 1 + G C CESC 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTACAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG < 41bp 1 0.651389513443758 1 0.852312684059143 experiment 0.697220973112485 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764025 nonsynonymous SNV 0.439 0 5 hm5C_associated_SNPs_18972 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr1 12027073 12027073 1 + C T CESC 12027067 + 12027047 12027087 41 TGCCCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC TGCCCGGATGTCTATTGGTTCCCCATTTTCACGGAGGTGGC < 41bp 1 0.556278100120901 1 0.0671496689319611 experiment 0.887443799758198 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027067 chr1:12027073 synonymous SNV . 0 27 hm5C_associated_SNPs_18973 0 0 6 BUD13 POSTAR2 ENCODE chr1:12027035-12027076
64251 chr1 12027073 12027073 1 + C T CESC 12027087 + 12027067 12027107 41 CCCCATCTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG CCCCATTTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG < 41bp 1 0.18632275814015 1 0.0786432921886444 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027087 chr1:12027073 synonymous SNV . 0 7 hm5C_associated_SNPs_18974 0 0 6 BUD13 POSTAR2 ENCODE chr1:12027035-12027076
64251 chr22 38021921 38021921 1 + C T CESC 38021903 + 38021883 38021923 41 CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTTAG < 41bp 1 0.629446147063209 1 0.075468510389328 experiment 0.741107705873582 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021903 chr22:38021921 nonsynonymous SNV 0.986 1 39 hm5C_associated_SNPs_18975 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38021893-38021941
64251 chrX 70516458 70516458 1 + G C CESC 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATCAT < 41bp 1 0.124023258609763 1 0.0787816643714905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516458 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_18976 0 0 56 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr12 4459046 4459046 1 + C G CESC 4459031 + 4459011 4459051 41 CAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGAC CAAATTTTGCAAAGATATGACGGTAAAGTATGACTGAAGAC < 41bp 1 0.427050986312646 1 0.385828256607056 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIGAR ENSG00000078237 CDS Human protein_coding chr12:4459031 chr12:4459046 stopgain 0.720 0 36 hm5C_associated_SNPs_18977 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:4459029-4459049
64251 chr12 22811985 22811985 1 + C T CESC 22811993 + 22811973 22812013 41 ATCCATGCTATTCATGCACACAATGGCTGGATCCCCAAATC ATCCATGCTATTTATGCACACAATGGCTGGATCCCCAAATC < 41bp 1 0.416968829746923 1 0.241540610790253 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22811993 chr12:22811985 nonsynonymous SNV 0.997 3 13 hm5C_associated_SNPs_18978 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:22811953-22812004
64251 chr11 65830913 65830913 1 + G A CESC 65830898 + 65830878 65830918 41 CTGAGGAAGAAGAGATTGATCGGACCCCTTGGGGGGAACTG CTGAGGAAGAAGAGATTGATCGGACCCCTTGGGGGAAACTG < 41bp 1 0.389863722799389 1 0.41365322470665 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65830898 chr11:65830913 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_18979 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65830874-65830944
64251 chr11 65830913 65830913 1 + G A CESC 65830902 + 65830882 65830922 41 GGAAGAAGAGATTGATCGGACCCCTTGGGGGGAACTGGAAC GGAAGAAGAGATTGATCGGACCCCTTGGGGGAAACTGGAAC < 41bp 1 0.197388592958821 1 0.148360282182693 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65830902 chr11:65830913 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_18980 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65830874-65830944
64251 chr11 65830913 65830913 1 + G A CESC 65830903 + 65830883 65830923 41 GAAGAAGAGATTGATCGGACCCCTTGGGGGGAACTGGAACC GAAGAAGAGATTGATCGGACCCCTTGGGGGAAACTGGAACC < 41bp 1 0.0715280073377103 1 0.210121423006058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65830903 chr11:65830913 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_18981 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65830874-65830944
64251 chr11 65830913 65830913 1 + G A CESC 65830905 + 65830885 65830925 41 AGAAGAGATTGATCGGACCCCTTGGGGGGAACTGGAACCAT AGAAGAGATTGATCGGACCCCTTGGGGGAAACTGGAACCAT < 41bp 1 0.427509903137906 1 0.254217267036438 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65830905 chr11:65830913 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_18982 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65830874-65830944
64251 chr11 65830913 65830913 1 + G A CESC 65830926 + 65830906 65830946 41 TTGGGGGGAACTGGAACCATCTGATGAAGAATCCTCAGAAG TTGGGGGAAACTGGAACCATCTGATGAAGAATCCTCAGAAG < 41bp 1 0.579631873753726 1 0.731970369815826 experiment 0.840736252492549 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65830926 chr11:65830913 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_18983 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65830874-65830944
64251 chr11 65270585 65270585 1 + C T CESC 65270567 + 65270547 65270587 41 TGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAG TGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTTAG < 41bp 1 0.266087261974874 1 0.112396895885468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270567 chr11:65270585 . . 0 39 hm5C_associated_SNPs_18984 0 0 60 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65270560-65270620
64251 chr20 60962962 60962962 1 + C T CESC 60962981 + 60962961 60963001 41 TCGTAGGATGGTGAGTGTTTCCCTGGGCTTTGCTCATCACT TTGTAGGATGGTGAGTGTTTCCCTGGGCTTTGCTCATCACT < 41bp 1 0.269705185472068 1 0.188519328832626 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS21 ENSG00000171858 CDS Human protein_coding chr20:60962981 chr20:60962962 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_18985 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60962896-60962970
64251 chr20 33764059 33764059 1 + G C CESC 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGCAG < 41bp 1 0.744160176822424 1 0.831138491630554 experiment 0.511679646355152 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764059 synonymous SNV . 0 39 hm5C_associated_SNPs_18986 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764053-33764083
64251 chr9 124534964 124534964 1 + C T CESC 124534965 + 124534945 124534985 41 TCACAAGGTCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGC TCACAAGGTCCTCCGGGGTTCAGCCCTCACCTGCCCGCAGC < 41bp 1 0.312539889601324 1 0.172138780355453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124534965 chr9:124534964 synonymous SNV . 0 20 hm5C_associated_SNPs_18987 0 0 2 RBM15 POSTAR2 ENCODE chr9:124534937-124534985
64251 chr16 67917564 67917564 1 + C T CESC 67917568 + 67917548 67917588 41 ACCCTGCCCGCTCTCCCAGCCTGTGCTCCTTTCCCTCATCC ACCCTGCCCGCTCTCCTAGCCTGTGCTCCTTTCCCTCATCC < 41bp 1 0.377412122548851 1 0.184064865112305 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917568 chr16:67917564 stopgain 0.997 1 17 hm5C_associated_SNPs_18988 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67917519-67917564
64251 chr12 56495513 56495513 1 + C A CESC 56495521 + 56495501 56495541 41 CTCAGTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA CTCAGTGCCTCTATGGGCAGCACACAGAGTTGCCCACTCCA < 41bp 1 0.135216864081503 1 0.0694328844547272 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495521 chr12:56495513 nonsynonymous SNV 0.996 3 13 hm5C_associated_SNPs_18989 0 0 1 RPS3 POSTAR2 ENCODE chr12:56495458-56495516
64251 chr1 2116133 2116133 1 - G A CESC 2116142 - 2116122 2116162 41 GGGACCCGCACCCAGTGGGACTCACTCATCGTCTGGGGTCA GGGACCCGCACCCAGTGGGACTCACTCATTGTCTGGGGTCA < 41bp 1 0.153646584742794 1 0.0405192971229553 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2116142 chr1:2116133 nonsynonymous SNV 0.695 1 30 hm5C_associated_SNPs_18992 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:2116131-2116159
64251 chr1 82372833 82372833 1 + G A CESC 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTATGGTCGGACGGATAACAAGATTTGT < 41bp 1 0.270673629203676 1 0.36276775598526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372833 nonsynonymous SNV 0.998 2 30 hm5C_associated_SNPs_18993 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr16 28844674 28844674 1 + G A CESC 28844666 + 28844646 28844686 41 AGAAGACAAAGATGAGGGCCCTGTTGCTGAGTGAGTGGAGC AGAAGACAAAGATGAGGGCCCTGTTGCTAAGTGAGTGGAGC < 41bp 1 0.188018526174214 1 0.130511730909348 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844666 chr16:28844674 nonsynonymous SNV 0.985 2 29 hm5C_associated_SNPs_18995 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:28844654-28844674
64251 chr19 7584332 7584332 1 + G A CESC 7584339 + 7584319 7584359 41 TGGAGCCCGTCTCGGAGGATCTGGACCCCGACGCCGAAGCT TGGAGCCCGTCTCAGAGGATCTGGACCCCGACGCCGAAGCT < 41bp 1 0.78037429155175 1 0.61273854970932 experiment 0.4392514168965 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584339 chr19:7584332 synonymous SNV . 0 14 hm5C_associated_SNPs_18996 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:7584311-7584332
64251 chr12 56495503 56495503 1 + C T CESC 56495521 + 56495501 56495541 41 CTCAGTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA CTTAGTGCCTCTCTGGGCAGCACACAGAGTTGCCCACTCCA < 41bp 1 0.175576415166951 1 0.107623428106308 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495521 chr12:56495503 synonymous SNV . 0 3 hm5C_associated_SNPs_18998 0 0 2 PTBP1 POSTAR2 ENCODE chr12:56495475-56495511
64251 chr1 44878352 44878352 1 + G A CESC 44878350 + 44878330 44878370 41 TGCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTA TGCTGTCTCTGGCCTCATTTCTAATCGGGAAGCCTCATCTA < 41bp 1 0.358260324961922 1 0.6260666847229 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878350 chr1:44878352 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_18999 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44878329-44878367
64251 chr6 27101034 27101034 1 + G A CESC 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCGCCAAGATCCTGGAACTGGCGG < 41bp 1 0.441502164318343 1 0.47037598490715 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101034 nonsynonymous SNV 0.985 2 23 hm5C_associated_SNPs_19000 0 0 42 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27101000-27101040
64251 chr6 27101034 27101034 1 + G A CESC 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA AAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA < 41bp 1 0.546661413160059 1 0.540981650352478 experiment 0.906677173679881 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101034 nonsynonymous SNV 0.985 2 1 hm5C_associated_SNPs_19001 0 0 42 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27101000-27101040
64251 chr1 44878392 44878392 1 + G A CESC 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAAA < 41bp 1 0.492423395146936 1 0.165378391742706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878392 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_19002 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:44878386-44878407
64251 chr1 44878392 44878392 1 + G A CESC 44878382 + 44878362 44878402 41 CCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGTAC CCTCATCTAGCCCAGAGGATCGGAATGACAAATGTAAGTAC < 41bp 1 0.734474923565279 1 0.573281049728394 experiment 0.531050152869442 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878382 chr1:44878392 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_19003 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:44878386-44878407
64251 chr16 1889330 1889330 1 - G A CESC 1889321 - 1889301 1889341 41 TGCTGATTGATCTGACTGATCACACAGGCACCCTTCATTCC TGCTGATTGATTTGACTGATCACACAGGCACCCTTCATTCC < 41bp 1 0.471848895907267 1 0.0292732119560242 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MEIOB ENSG00000162039 CDS Human protein_coding chr16:1889321 chr16:1889330 synonymous SNV . 0 12 hm5C_associated_SNPs_19004 0 0 3 DDX55 POSTAR2 ENCODE chr16:1889324-1889375
64251 chr11 77921400 77921400 1 + C A CESC 77921407 + 77921387 77921427 41 TCCCCCTGCTGCTCCGCCTGCCACTGGCTGGTGGCCGTGGC TCCCCCTGCTGCTACGCCTGCCACTGGCTGGTGGCCGTGGC < 41bp 1 0.0934366779897433 1 0.126810669898987 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP35 ENSG00000118369 CDS Human protein_coding chr11:77921407 chr11:77921400 synonymous SNV . 0 14 hm5C_associated_SNPs_19006 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr11:77921377-77921416
64251 chr16 57254652 57254652 1 + G A CESC 57254661 + 57254641 57254681 41 CAGTTTTAAAAGAAGGTAGACAGCTGACCTATGAGAAAGTG CAGTTTTAAAAAAAGGTAGACAGCTGACCTATGAGAAAGTG < 41bp 1 0.236212455100597 1 0.54911482334137 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57254661 chr16:57254652 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_19007 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:57254647-57254702
64251 chr19 13049556 13049556 1 + C G CESC 13049544 + 13049524 13049564 41 CTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAA CTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTGTACTTCAA < 41bp 1 0.651205652616771 1 0.738030731678009 experiment 0.697588694766458 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049544 chr19:13049556 synonymous SNV . 0 33 hm5C_associated_SNPs_19010 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:13049420-13049560
64251 chr19 13049556 13049556 1 + C G CESC 13049553 + 13049533 13049573 41 CTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTT CTGGCCGTCGCCGAGCCTGCCGTGTACTTCAAGGAGCAGTT < 41bp 1 0.400011383584616 1 0.110072493553162 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049553 chr19:13049556 synonymous SNV . 0 24 hm5C_associated_SNPs_19011 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:13049420-13049560
64251 chr9 130164919 130164919 1 + G A CESC 130164924 + 130164904 130164944 41 ATGTGCTTCATGCCCGAGACCCCGCGCTTCCTGCTGACTCA ATGTGCTTCATGCCCAAGACCCCGCGCTTCCTGCTGACTCA < 41bp 1 0.279610699956999 1 0.0545880496501923 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A8 ENSG00000136856 CDS Human protein_coding chr9:130164924 chr9:130164919 nonsynonymous SNV 0.998 3 16 hm5C_associated_SNPs_19012 0 0 1 SND1 POSTAR2 ENCODE chr9:130164899-130164958
64251 chr12 6941065 6941065 1 + G C CESC 6941063 + 6941043 6941083 41 GCCATGGAGCACCTGGGGACCAGCTTCAAGGATCCTGTGAG GCCATGGAGCACCTGGGGACCACCTTCAAGGATCCTGTGAG < 41bp 1 0.326552832062347 1 0.311273515224457 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6941063 chr12:6941065 nonsynonymous SNV 0.312 0 23 hm5C_associated_SNPs_19013 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:6941046-6941069
64251 chr19 14580219 14580219 1 + C G CESC 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTGTTC < 41bp 1 0.0444328466450515 1 0.0737427175045013 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580219 synonymous SNV . 0 38 hm5C_associated_SNPs_19015 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580219 14580219 1 + C G CESC 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTGTTCG < 41bp 1 0.0201524676105961 1 0.117114126682281 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580219 synonymous SNV . 0 37 hm5C_associated_SNPs_19016 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580219 14580219 1 + C G CESC 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCAGTGCGGGACACCCCTTCCTGGTGAACCTGTTCGGCTG < 41bp 1 0.421443428254539 1 0.745142221450806 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580219 synonymous SNV . 0 33 hm5C_associated_SNPs_19017 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 13054640 13054640 1 + G T CESC 13054643 + 13054623 13054663 41 GACAAGGAGGATGATGAGGACAAAGATGAGGATGAGGAGGA GACAAGGAGGATGATGATGACAAAGATGAGGATGAGGAGGA < 41bp 1 0.662514669320561 1 0.49016472697258 experiment 0.674970661358878 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054643 chr19:13054640 nonsynonymous SNV 0.028 0 18 hm5C_associated_SNPs_19019 0 0 98 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr19 1272191 1272191 1 + C G CESC 1272179 + 1272159 1272199 41 GTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT GTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTGAGAGCCAT < 41bp 1 0.114249630126508 1 0.11292952299118 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272179 chr19:1272191 nonsynonymous SNV 0.170 0 33 hm5C_associated_SNPs_19021 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1272184-1272214
64251 chr19 1272191 1272191 1 + C G CESC 1272182 + 1272162 1272202 41 CTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCATTTC CTTGCCCAGAAGAGGCGCATCTGTCCTCTGAGAGCCATTTC < 41bp 1 0.347227100271054 1 0.0488358736038208 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272182 chr19:1272191 nonsynonymous SNV 0.170 0 30 hm5C_associated_SNPs_19022 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1272184-1272214
64251 chr1 35824609 35824609 1 + C T CESC 35824625 + 35824605 35824645 41 AATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATG AATGTCGAATCAAACAGGATCTGAAAATTCATTGCTGGATG < 41bp 1 0.453302935016521 1 0.335442811250687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824625 chr1:35824609 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_19023 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:35824570-35824615
64251 chr19 36227608 36227608 1 + G A CESC 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG CGAGCTCTAAGGAAGAGCCTCCATCCCCAGATGATAAAGAG < 41bp 1 0.00583525844337153 1 0.0968704223632812 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227608 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_19024 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36227590-36227626
64251 chr16 29811297 29811297 1 + G A CESC 29811295 + 29811275 29811315 41 CCACCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGA CCACCAGAGGCAAAGAGAGCCCAAGGCCCTGAGGAAGAGGA < 41bp 1 0.128091912854324 1 0.589030623435974 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811295 chr16:29811297 nonsynonymous SNV 0.953 0 23 hm5C_associated_SNPs_19026 0 0 4 DDX24 POSTAR2 ENCODE chr16:29811257-29811316
64251 chr16 29811297 29811297 1 + G A CESC 29811301 + 29811281 29811321 41 GAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGAGATCGG GAGGCAAAGAGAGCCCAAGGCCCTGAGGAAGAGGAGATCGG < 41bp 1 0.161859056337637 1 0.130485534667969 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811301 chr16:29811297 nonsynonymous SNV 0.953 0 17 hm5C_associated_SNPs_19027 0 0 4 DDX24 POSTAR2 ENCODE chr16:29811257-29811316
64251 chr15 91456130 91456130 1 + C T CESC 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCTGTGCTGCG < 41bp 1 0.646862779985419 1 0.886131763458252 experiment 0.706274440029163 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456130 synonymous SNV . 0 33 hm5C_associated_SNPs_19028 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:91456118-91456153
64251 chr9 6498126 6498126 1 + G C CESC 6498113 + 6498093 6498133 41 GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTC GTTGAACCTGCTCCTTGGACCTCTGAAGGAATACAACGGTC < 41bp 1 0.40763841933586 1 0.144914120435715 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498113 chr9:6498126 nonsynonymous SNV 0.998 2 34 hm5C_associated_SNPs_19029 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr9 6498126 6498126 1 + G C CESC 6498115 + 6498095 6498135 41 TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTCAA TGAACCTGCTCCTTGGACCTCTGAAGGAATACAACGGTCAA < 41bp 1 0.718510890369223 1 0.766703367233276 experiment 0.562978219261555 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498115 chr9:6498126 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_19030 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr1 171535854 171535854 1 + C A CHOL 171535864 + 171535844 171535884 41 ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACAGATC ACAAGAGAAAACAAGCCCAGCTACAGTCAGAAGCACAGATC < 41bp 1 0.455112770278302 1 0.433194845914841 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171535864 chr1:171535854 nonsynonymous SNV 0.284 0 11 hm5C_associated_SNPs_19031 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:171535818-171535854
64251 chr1 214503534 214503534 1 + C A CHOL 214503545 + 214503525 214503565 41 TATTGATCTCCTGTACCCAACGGAAGATAGAAATGACCGGT TATTGATCTACTGTACCCAACGGAAGATAGAAATGACCGGT < 41bp 1 0.618147523133954 1 0.630851745605469 experiment 0.763704953732092 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214503545 chr1:214503534 synonymous SNV . 0 10 hm5C_associated_SNPs_19032 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:214503521-214503546
64251 chr3 184039802 184039802 1 + A T CHOL 184039793 + 184039773 184039813 41 AGCAGGAGAAGCAGGAGAAGCTGAGAGTGAGAAAGGAGGAG AGCAGGAGAAGCAGGAGAAGCTGAGAGTGTGAAAGGAGGAG < 41bp 1 0.506075922816277 1 0.388317376375198 experiment 0.987848154367445 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039793 chr3:184039802 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_19033 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184039718-184039833
64251 chr16 23578342 23578342 1 + A C CHOL 23578358 + 23578338 23578378 41 TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC TAAACAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC < 41bp 1 0.0628918076735347 1 0.0790891051292419 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23578358 chr16:23578342 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_19038 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:23578290-23578386
64251 chr1 40724003 40724003 1 + C T CHOL 40724018 + 40723998 40724038 41 ATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATCT ATCTTTGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATCT < 41bp 1 0.217211482818211 1 0.0241536200046539 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40724018 chr1:40724003 synonymous SNV . 0 6 hm5C_associated_SNPs_19039 0 0 6 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:40723996-40724015
64251 chr19 10941703 10941703 1 + G A CHOL 10941683 + 10941663 10941703 41 CCCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCG CCCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCA < 41bp 1 0.0606413730427595 1 0.0314130187034607 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941683 chr19:10941703 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_19040 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941703 10941703 1 + G A CHOL 10941684 + 10941664 10941704 41 CCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGA CCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCAA < 41bp 1 0.73308948434138 1 0.248834162950516 experiment 0.53382103131724 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941684 chr19:10941703 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_19041 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941703 10941703 1 + G A CHOL 10941686 + 10941666 10941706 41 TGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGC TGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCAAGC < 41bp 1 0.0573751079466254 1 0.0730002820491791 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941686 chr19:10941703 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_19042 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941703 10941703 1 + G A CHOL 10941687 + 10941667 10941707 41 GCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCC GCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCAAGCC < 41bp 1 0.234459438575317 1 0.103074252605438 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941687 chr19:10941703 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_19043 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr1 42925444 42925444 1 + G C CHOL 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTGACTCACGACAGTCCTTTGTGTTTATTGTA < 41bp 1 0.0581687025275854 1 0.0991974174976349 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925444 nonsynonymous SNV 0.990 0 14 hm5C_associated_SNPs_19044 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr10 91177164 91177164 1 + G A CHOL 91177165 + 91177145 91177185 41 AAAAGGCCAAAATAAAGACGCCCTTGAGTGCTTGGAACAAG AAAAGGCCAAAATAAAGACACCCTTGAGTGCTTGGAACAAG < 41bp 1 0.0892266149116488 1 0.0600224137306213 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91177165 chr10:91177164 nonsynonymous SNV 0.027 5 20 hm5C_associated_SNPs_19045 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:91177159-91177178
64251 chr19 33581730 33581730 1 + G T CHOL 33581723 + 33581703 33581743 41 TTTGTGTCTTCACGACAGAACAGAGCAGACAAATCTGTTCT TTTGTGTCTTCACGACAGAACAGAGCATACAAATCTGTTCT < 41bp 1 0.375899738186441 1 0.49689045548439 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33581723 chr19:33581730 nonsynonymous SNV 0.999 4 28 hm5C_associated_SNPs_19046 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:33581720-33581740
64251 chrX 70516449 70516449 1 + C T CHOL 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCGTCCTGTGACTGTGGAGCCCATGGACTAGTTAGATGAT < 41bp 1 0.0873231655848774 1 0.066047340631485 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516449 stopgain 1.000 1 30 hm5C_associated_SNPs_19047 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr1 11897068 11897068 1 + C G CHOL 11897086 + 11897066 11897106 41 TCCTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCAGTCC TCGTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCAGTCC < 41bp 1 0.701865123601192 1 0.846120238304138 experiment 0.596269752797616 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897086 chr1:11897068 nonsynonymous SNV 0.980 1 3 hm5C_associated_SNPs_19048 0 0 3 BUD13 POSTAR2 ENCODE chr1:11897026-11897100
64251 chr5 71491937 71491937 1 + G T CHOL 71491948 + 71491928 71491968 41 GAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGATGA GAGAAGCAGTGAGTAGACGACATTGAAAAATTTGAAGATGA < 41bp 1 0.0838655459964683 1 0.104748487472534 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491948 chr5:71491937 stopgain 0.946 0 10 hm5C_associated_SNPs_19049 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:71491899-71491940
64251 chr2 32613960 32613960 1 + T C CHOL 32613943 + 32613923 32613963 41 GTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACC GTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTCACC < 41bp 1 0.122480895156573 1 0.774440944194794 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32613943 chr2:32613960 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_19050 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr2:32613945-32613966
64251 chr19 45162133 45162133 1 + G T CHOL 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TCTATTGGTCCAAATGTTCCCTTGAGGTCCTTTGGCACTGT < 41bp 1 0.600295259420434 1 0.295389711856842 experiment 0.799409481159131 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162133 nonsynonymous SNV 0.005 2 22 hm5C_associated_SNPs_19051 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr19 45162133 45162133 1 + G T CHOL 45162140 + 45162120 45162160 41 TCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG TCCAAATGTTCCCTTGAGGTCCTTTGGCACTGTCATCTGTG < 41bp 1 0.0211693660725368 1 0.0224297642707825 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162140 chr19:45162133 nonsynonymous SNV 0.005 2 14 hm5C_associated_SNPs_19052 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr8 145535402 145535402 1 + A G CHOL 145535406 + 145535386 145535426 41 GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCC GCCCCCTCCCCAGCCTGCAGCAGCTCCAGCCTCTACGCCCC < 41bp 1 0.321995630254099 1 0.219299614429474 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535406 chr8:145535402 nonsynonymous SNV 0.993 2 17 hm5C_associated_SNPs_19053 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145535396-145535434
64251 chr12 31242081 31242081 1 + G A CHOL 31242078 + 31242058 31242098 41 TCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCC TCGGCTGGTCTCCCTTGGCTCCCAGCAGGTAAACAGTAGCC < 41bp 1 0.29517479364466 1 0.110836625099182 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242078 chr12:31242081 nonsynonymous SNV 0.439 3 24 hm5C_associated_SNPs_19054 1 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:31242049-31242083
64251 chr12 31242073 31242073 1 + T C CHOL 31242078 + 31242058 31242098 41 TCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCC TCGGCTGGTCTCCCTCGGCTCCCGGCAGGTAAACAGTAGCC < 41bp 1 0.466460313823319 1 0.198191732168198 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242078 chr12:31242073 synonymous SNV . 0 16 hm5C_associated_SNPs_19055 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:31242044-31242075
64251 chr19 11141508 11141508 1 + G T CHOL 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGGGCTCGTCCTGAACCTCCAGTCGGC < 41bp 1 0.198529373958849 1 0.342818677425385 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141508 nonsynonymous SNV 0.955 5 23 hm5C_associated_SNPs_19057 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chr2 128861520 128861520 1 + A C CHOL 128861524 + 128861504 128861544 41 AGTGAGTTTTTAGCAGAAGACAGTCAAGAGAAATTTTGGAA AGTGAGTTTTTAGCAGCAGACAGTCAAGAGAAATTTTGGAA < 41bp 1 0.0644234461250075 1 0.226362317800522 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128861524 chr2:128861520 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_19058 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:128861503-128861532
64251 chr1 161130441 161130441 1 + C T CHOL 161130429 + 161130409 161130449 41 GGTCCAGCCTGTGGTGTCCACAATGCCCCAGGCCTCTGAGC GGTCCAGCCTGTGGTGTCCACAATGCCCCAGGTCTCTGAGC < 41bp 1 0.670737192576784 1 0.481158852577209 experiment 0.658525614846432 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130429 chr1:161130441 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_19059 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:161130419-161130446
64251 chr19 49593594 49593594 1 + A G COAD 49593585 + 49593565 49593605 41 TCCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGA TCCTCCAACTCGTGCTGAAACCCGAGAGGGGCGCATGGAGA < 41bp 1 0.711300700631267 1 0.368705630302429 experiment 0.577398598737465 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593585 chr19:49593594 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_19060 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593594 49593594 1 + A G COAD 49593586 + 49593566 49593606 41 CCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGAG CCTCCAACTCGTGCTGAAACCCGAGAGGGGCGCATGGAGAG < 41bp 1 0.517676634482095 1 0.760877728462219 experiment 0.96464673103581 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593586 chr19:49593594 nonsynonymous SNV 0.998 4 29 hm5C_associated_SNPs_19061 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593594 49593594 1 + A G COAD 49593596 + 49593576 49593616 41 GTGCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGT GTGCTGAAACCCGAGAGGGGCGCATGGAGAGGAAAGTATGT < 41bp 1 0.177451414339677 1 0.364840388298035 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593596 chr19:49593594 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_19062 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593594 49593594 1 + A G COAD 49593598 + 49593578 49593618 41 GCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGTCA GCTGAAACCCGAGAGGGGCGCATGGAGAGGAAAGTATGTCA < 41bp 1 0.476391077111799 1 0.328505098819733 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593598 chr19:49593594 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_19063 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr16 2816046 2816046 1 + A C COAD 2816031 + 2816011 2816051 41 CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGCGGCCG < 41bp 1 0.148457618172726 1 0.323656916618347 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816031 chr16:2816046 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_19065 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816046 2816046 1 + A C COAD 2816050 + 2816030 2816070 41 CCTCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC CCTCTCGACGCCGAAGCGGCCGCTCTCGGACACCCCCAACC < 41bp 1 0.166808983462118 1 0.0862870812416077 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816050 chr16:2816046 nonsynonymous SNV 0.999 3 17 hm5C_associated_SNPs_19066 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816046 2816046 1 + A C COAD 2816052 + 2816032 2816072 41 TCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG TCTCGACGCCGAAGCGGCCGCTCTCGGACACCCCCAACCAG < 41bp 1 0.208822782407055 1 0.182865709066391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816052 chr16:2816046 nonsynonymous SNV 0.999 3 15 hm5C_associated_SNPs_19067 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr11 68846030 68846030 1 + G T COAD 68846028 + 68846008 68846048 41 GCCACTACTACTTTGACTACCTGGGGAACCTCATCGCCCTG GCCACTACTACTTTGACTACCTTGGGAACCTCATCGCCCTG < 41bp 1 0.480260768763777 1 0.230260998010635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPCN2 ENSG00000162341 CDS Human protein_coding chr11:68846028 chr11:68846030 synonymous SNV . 0 23 hm5C_associated_SNPs_19068 0 0 1 GRWD1 POSTAR2 ENCODE chr11:68846006-68846059
64251 chr17 21731043 21731043 1 + C T COAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGATCAGCAGAGGCTCATCTT < 41bp 1 0.141619686772995 1 0.310296297073364 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731043 synonymous SNV . 0 24 hm5C_associated_SNPs_19069 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr19 34292090 34292090 1 + C T COAD 34292109 + 34292089 34292129 41 CCGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCCTGGCTG CTGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCCTGGCTG < 41bp 1 0.58129784824804 1 0.0872621834278107 experiment 0.837404303503921 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34292109 chr19:34292090 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_19072 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:34292072-34292094
64251 chr1 154248123 154248123 1 + T C COAD 154248129 + 154248109 154248149 41 CCTCCAGCCCTGGATGATGCCTTTTCCATCCTGGACTTATT CCTCCAGCCCTGGACGATGCCTTTTCCATCCTGGACTTATT < 41bp 1 0.0903345405467035 1 0.0425158441066742 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAX1 ENSG00000143575 CDS Human protein_coding chr1:154248129 chr1:154248123 synonymous SNV . 0 15 hm5C_associated_SNPs_19073 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154248091-154248179
64251 chr12 123028753 123028753 1 + T C COAD 123028737 + 123028717 123028757 41 AATCAAGTCCAGTTTTATTTCTACTGAAAATTATCATACTC AATCAAGTCCAGTTTTATTTCTACTGAAAATTATCACACTC < 41bp 1 0.337105426438195 1 0.527902483940125 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123028737 chr12:123028753 synonymous SNV . 0 37 hm5C_associated_SNPs_19076 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221668 chr12:123028740-123028760
64251 chrX 103411571 103411571 1 + C T COAD 103411562 + 103411542 103411582 41 CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG CCTCCTCGCGGGGTGGGCACCTGCCCGAGTGAGGAGCCGGG < 41bp 1 0.765153882403755 1 0.0839024186134338 experiment 0.46969223519249 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411562 chrX:103411571 synonymous SNV . 0 30 hm5C_associated_SNPs_19077 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103411536-103411574
64251 chr17 57733219 57733219 1 + G A COAD 57733217 + 57733197 57733237 41 TTGATTTTCTTTCTGTAGATCAGTGAAAAGCATGATGTGGT TTGATTTTCTTTCTGTAGATCAATGAAAAGCATGATGTGGT < 41bp 1 0.0476871524344951 1 0.275144845247269 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57733217 chr17:57733219 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_19078 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57733179-57733386
64251 chrX 107909796 107909796 1 + T C COAD 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCCGGACCA < 41bp 1 0.762939046876341 1 0.750156998634338 experiment 0.474121906247318 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909796 synonymous SNV . 0 35 hm5C_associated_SNPs_19100 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:107909780-107909800
64251 chr5 141353245 141353245 1 + T C COAD 141353260 + 141353240 141353280 41 GTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGC GTCTGCCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGC < 41bp 1 0.552065913956679 1 0.106529206037521 experiment 0.895868172086642 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141353260 chr5:141353245 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_19101 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:141353211-141353248
64251 chr19 55997947 55997947 1 + G A COAD 55997929 + 55997909 55997949 41 GGTGTTCCTGGCTGTGGCCGCCGTGAAGCTGGGCCTGCGGG GGTGTTCCTGGCTGTGGCCGCCGTGAAGCTGGGCCTGCAGG < 41bp 1 0.300403876437902 1 0.7710200548172 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAT14 ENSG00000090971 CDS Human protein_coding chr19:55997929 chr19:55997947 nonsynonymous SNV 0.998 2 39 hm5C_associated_SNPs_19103 0 0 3 DDX3X POSTAR2 ENCODE chr19:55997914-55998027
64251 chrX 152037427 152037427 1 + T G COAD 152037426 + 152037406 152037446 41 GCCCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT GCCCCCAAGTACCACATCCCCGACTGGGTGGCCTACTACCT < 41bp 1 0.604172212035597 1 0.0284517705440521 experiment 0.791655575928806 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037426 chrX:152037427 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_19104 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chrX:152037426-152037427
64251 chr14 102466397 102466397 1 + C T COAD 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGATGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG < 41bp 1 0.214779675333768 1 0.578078627586365 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466397 synonymous SNV . 0 4 hm5C_associated_SNPs_19106 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221668 chr14:102466360-102466400
64251 chr22 46627827 46627827 1 + G A COAD 46627826 + 46627806 46627846 41 CAGTGCACGTCAGTGGAGACCGTCACGGAGCTCACGGAATT CAGTGCACGTCAGTGGAGACCATCACGGAGCTCACGGAATT < 41bp 1 0.407962655397437 1 0.0408827066421509 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPARA ENSG00000186951 CDS Human protein_coding chr22:46627826 chr22:46627827 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_19107 0 0 1 GRWD1 POSTAR2 ENCODE chr22:46627781-46627936
64251 chr3 183898757 183898757 1 + C T COAD 183898739 + 183898719 183898759 41 ATGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTGCTC ATGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTGTTC < 41bp 1 0.79110136068719 1 0.587756097316742 experiment 0.417797278625621 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898739 chr3:183898757 nonsynonymous SNV 0.999 4 39 hm5C_associated_SNPs_19108 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr3:183898670-183898760
64251 chr19 1360354 1360354 1 + G A COAD 1360355 + 1360335 1360375 41 CCCCGCGGAGACGTGTTGGGCAGTTCCAGACCTCACAGGAG CCCCGCGGAGACGTGTTGGACAGTTCCAGACCTCACAGGAG < 41bp 1 0.275786676177554 1 0.315778642892838 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MUM1 ENSG00000160953 CDS Human protein_coding chr19:1360355 chr19:1360354 nonsynonymous SNV 0.001 1 20 hm5C_associated_SNPs_19110 0 0 8 DDX3X POSTAR2 ENCODE chr19:1360312-1360417
64251 chr13 52293442 52293442 1 + G A COAD 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGCACCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA < 41bp 1 0.558483630234335 1 0.927771210670471 experiment 0.883032739531329 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293442 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_19111 0 0 3 DDX24 POSTAR2 ENCODE chr13:52293432-52293486
64251 chr12 101680190 101680190 1 + C T COAD 101680176 + 101680156 101680196 41 GTTTTTTTTGACTATCACCTCGATCCTGGAGACTCAGGACA GTTTTTTTTGACTATCACCTCGATCCTGGAGACTTAGGACA < 41bp 1 0.0893826561955516 1 0.126728713512421 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101680176 chr12:101680190 stopgain 1.000 0 35 hm5C_associated_SNPs_19112 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:101680171-101680196
64251 chr3 33183922 33183922 1 + A T COAD 33183934 + 33183914 33183954 41 CTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA CTCTTGGATCTGGAGGAGACCAGCTAGCCCACAGCAACCAA < 41bp 1 0.440130191132268 1 0.113033831119537 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTAP ENSG00000170275 CDS Human protein_coding chr3:33183934 chr3:33183922 nonsynonymous SNV 0.949 0 9 hm5C_associated_SNPs_19113 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:33183902-33183933
64251 chr3 47456472 47456472 1 - G T COAD 47456479 - 47456459 47456499 41 GGCCTTTTGTCCTCAGGGACCCCAGGGCGGGGCAGTTCCCC GGCCTTTTGTCCTCAGGGACCCCAGGGAGGGGCAGTTCCCC < 41bp 1 0.153864263363168 1 0.111864924430847 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAP ENSG00000114650 CDS Human protein_coding chr3:47456479 chr3:47456472 synonymous SNV . 0 28 hm5C_associated_SNPs_19114 0 0 6 EFTUD2 POSTAR2 ENCODE chr3:47456451-47456528
64251 chr2 37475354 37475354 1 + A C COAD 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATGAATCCAACGAAGATGGGAGAGAGA < 41bp 1 0.10888559822759 1 0.325759053230286 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475354 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_19115 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr2 37475354 37475354 1 + A C COAD 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATGAATCCAACGAAGATGGGAGAGAGAT < 41bp 1 0.475908014237201 1 0.248678803443909 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475354 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_19116 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr3 150289802 150289802 1 + C T COAD 150289790 + 150289770 150289810 41 AGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATG AGTTTGGAATTCTAGTTCTACTGAGTTTTGTGTTGTATATG < 41bp 1 0.544080398037776 1 0.17607319355011 experiment 0.911839203924448 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150289790 chr3:150289802 nonsynonymous SNV 0.997 0 33 hm5C_associated_SNPs_19120 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:150289763-150289811
64251 chr5 71493401 71493401 1 + G A COAD 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCAAG < 41bp 1 0.0369705982301361 1 0.0744484961032867 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493401 nonsynonymous SNV 0.055 2 39 hm5C_associated_SNPs_19121 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493364-71493452
64251 chr1 118499758 118499758 1 + G A COAD 118499775 + 118499755 118499795 41 AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG AACAAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG < 41bp 1 0.148695776358549 1 0.0592679679393768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118499775 chr1:118499758 nonsynonymous SNV 0.721 0 4 hm5C_associated_SNPs_19126 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:118499701-118499758
64251 chr16 2011672 2011672 1 + C T COAD 2011691 + 2011671 2011711 41 TCCTCCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC TTCTCCTGAGGCCTGGGGGCCAGAACCATTGCAAATCTTCC < 41bp 1 0.571877752216613 1 0.57218736410141 experiment 0.856244495566775 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011691 chr16:2011672 synonymous SNV . 0 2 hm5C_associated_SNPs_19127 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr14 24707966 24707966 1 + C A COAD 24707977 + 24707957 24707997 41 GAATCCAATCTTCAGTGAGGCGTGCTAGACCTGAGCAGTTC GAATCCAATATTCAGTGAGGCGTGCTAGACCTGAGCAGTTC < 41bp 1 0.435335614967688 1 0.227092653512955 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPR2 ENSG00000100938 CDS Human protein_coding chr14:24707977 chr14:24707966 synonymous SNV . 0 10 hm5C_associated_SNPs_19128 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:24707954-24707980
64251 chr1 44878381 44878381 1 + T A COAD 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATCGGGAAGCCTCATCTAGCCCAGAGGAACGGAATGACAGA < 41bp 1 0.484640419738627 1 0.279859185218811 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878381 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_19129 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr1 44878381 44878381 1 + T A COAD 44878382 + 44878362 44878402 41 CCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGTAC CCTCATCTAGCCCAGAGGAACGGAATGACAGATGTAAGTAC < 41bp 1 0.658083941541611 1 0.422470837831497 experiment 0.683832116916779 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878382 chr1:44878381 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_19130 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr5 150028806 150028806 1 + G T COAD 150028797 + 150028777 150028817 41 AACTTCACTGCACCCCCCACCTACACTGAGACCTTGTCCAC AACTTCACTGCACCCCCCACCTACACTGATACCTTGTCCAC < 41bp 1 0.504862759362778 1 0.770458817481995 experiment 0.990274481274444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNPO ENSG00000171992 CDS Human protein_coding chr5:150028797 chr5:150028806 nonsynonymous SNV 0.971 4 30 hm5C_associated_SNPs_19131 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:150028786-150028860
64251 chr20 30366755 30366755 1 + G T COAD 30366771 + 30366751 30366791 41 AACAGATATCATTTGAGGAGCAAGAAGGATGATATTAGTAA AACATATATCATTTGAGGAGCAAGAAGGATGATATTAGTAA < 41bp 1 0.44402472971295 1 0.321256518363953 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30366771 chr20:30366755 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_19132 0 0 19 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:30366715-30366761
64251 chr5 140789634 140789634 1 + G A COAD 140789623 + 140789603 140789643 41 AGTGAGCCCGGACTCTTCAGCCTGGGGCTGCGCACTGGGGA AGTGAGCCCGGACTCTTCAGCCTGGGGCTGCACACTGGGGA < 41bp 1 0.255733429664638 1 0.285666882991791 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB6 ENSG00000253305 CDS Human protein_coding chr5:140789623 chr5:140789634 nonsynonymous SNV 0.987 0 32 hm5C_associated_SNPs_19133 0 0 1 QKI POSTAR2 GSE21578,GSM545211 chr5:140789613-140789645
64251 chr17 79652702 79652702 1 + C T COAD 79652714 + 79652694 79652734 41 GACCTGATCCGCCAAGGGGACACACAGTGAGTTAGCGGGGC GACCTGATTCGCCAAGGGGACACACAGTGAGTTAGCGGGGC < 41bp 1 0.21751902267479 1 0.163092046976089 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79652714 chr17:79652702 synonymous SNV . 0 9 hm5C_associated_SNPs_19134 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:79652658-79652715
64251 chr11 65402839 65402839 1 + C T COAD 65402834 + 65402814 65402854 41 CAACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATG CAACACGCCCTCCCTGCTGGCGCTGTGCCATGTCCTGGATG < 41bp 1 0.139358763411736 1 0.048319548368454 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402834 chr11:65402839 nonsynonymous SNV 0.996 4 26 hm5C_associated_SNPs_19135 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402839 65402839 1 + C T COAD 65402836 + 65402816 65402856 41 ACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGAT ACACGCCCTCCCTGCTGGCGCTGTGCCATGTCCTGGATGAT < 41bp 1 0.0629624824244801 1 0.0723572075366974 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402836 chr11:65402839 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_19136 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402839 65402839 1 + C T COAD 65402841 + 65402821 65402861 41 CCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTC CCCTCCCTGCTGGCGCTGTGCCATGTCCTGGATGATGCCTC < 41bp 1 0.0634898625887116 1 0.127528667449951 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402841 chr11:65402839 nonsynonymous SNV 0.996 4 19 hm5C_associated_SNPs_19137 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402839 65402839 1 + C T COAD 65402842 + 65402822 65402862 41 CCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTCC CCTCCCTGCTGGCGCTGTGCCATGTCCTGGATGATGCCTCC < 41bp 1 0.130088402806578 1 0.373545110225677 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402842 chr11:65402839 nonsynonymous SNV 0.996 4 18 hm5C_associated_SNPs_19138 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr3 155628648 155628648 1 + G T COAD 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTCGAGAGATCAAATAGAGAGTAGGCACGTC < 41bp 1 0.337205732178715 1 0.130421429872513 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628648 stopgain 0.998 1 25 hm5C_associated_SNPs_19141 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155628551-155628653
64251 chr16 4700474 4700474 1 + G A COAD 4700472 + 4700452 4700492 41 GATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCT GATCTGAACTTCCTGGGCAGCCACCCGGTCCAGGTGGGTCT < 41bp 1 0.0618634703234344 1 0.0633126795291901 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700472 chr16:4700474 nonsynonymous SNV 0.600 4 23 hm5C_associated_SNPs_19142 0 0 4 BUD13 POSTAR2 ENCODE chr16:4700457-4700565
64251 chr22 38282822 38282822 1 + C A COAD 38282832 + 38282812 38282852 41 ATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAG ATGGGGATTTATTCATCCGTCAGATCCACAAATTTGAGGAG < 41bp 1 0.403258155830633 1 0.658248841762543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282832 chr22:38282822 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_19143 0 0 14 EIF3G POSTAR2 GSE65004,GSM1585673 chr22:38282769-38282845
64251 chr6 3152726 3152726 1 + C T COAD 3152743 + 3152723 3152763 41 CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCG CTGTATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCG < 41bp 1 0.116678875720697 1 0.420662045478821 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BPHL ENSG00000137274 CDS Human protein_coding chr6:3152743 chr6:3152726 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_19145 0 0 1 PPIG POSTAR2 ENCODE chr6:3152719-3152808
64251 chr9 134064461 134064461 1 + A G COAD 134064468 + 134064448 134064488 41 AATAAATTCCCTTAAGCCATCTGGGCCTACACCAGCATCCG AATAAATTCCCTTGAGCCATCTGGGCCTACACCAGCATCCG < 41bp 1 0.588606127793228 1 0.739716470241547 experiment 0.822787744413544 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134064468 chr9:134064461 nonsynonymous SNV 0.931 3 14 hm5C_associated_SNPs_19146 0 0 7 FUS POSTAR2 SRX029328 chr9:134064442-134064463
64251 chr4 79437039 79437039 1 + C T COAD 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGCGTGTGAGAGCCGAAGACCATCCAGCTCTACAAACACCT < 41bp 1 0.0523888385837216 1 0.0840206742286682 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437039 stopgain 0.272 1 7 hm5C_associated_SNPs_19147 0 0 3 RPS3 POSTAR2 ENCODE chr4:79437007-79437060
64251 chr14 21963418 21963418 1 + T G COAD 21963398 + 21963378 21963418 41 CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAT CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAG < 41bp 1 0.106124277697675 1 0.0305834412574768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963398 chr14:21963418 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_19148 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:21963417-21963418
64251 chr15 90119350 90119350 1 + C T COAD 90119362 + 90119342 90119382 41 GGCCCAGGCCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGA GGCCCAGGTCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGA < 41bp 1 0.33923686349104 1 0.263418316841125 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90119362 chr15:90119350 nonsynonymous SNV 0.135 1 9 hm5C_associated_SNPs_19149 0 0 4 EIF3H POSTAR2 ENCODE chr15:90119321-90119370
64251 chr15 90119350 90119350 1 + C T COAD 90119366 + 90119346 90119386 41 CAGGCCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGATGGA CAGGTCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGATGGA < 41bp 1 0.178081306690438 1 0.264495730400085 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90119366 chr15:90119350 nonsynonymous SNV 0.135 1 5 hm5C_associated_SNPs_19150 0 0 4 EIF3H POSTAR2 ENCODE chr15:90119321-90119370
64251 chr19 14574934 14574934 1 + C T COAD 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAGAAGAGCTTGCGGGATCCTCCTTCCAGCCCATCGAGC < 41bp 1 0.0584138640879924 1 0.182464390993118 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574934 nonsynonymous SNV 0.016 0 13 hm5C_associated_SNPs_19153 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr12 62938743 62938743 1 + A C COAD 62938730 + 62938710 62938750 41 ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGAT ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAACGCAGGAT < 41bp 1 0.216997939369292 1 0.26512411236763 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62938730 chr12:62938743 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_19157 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:62938723-62938744
64251 chr15 63866324 63866324 1 + G A COAD 63866342 + 63866322 63866362 41 CAGAATCTAGAAAGTTTGATCCATTCCTAGGTAAGATATAT CAAAATCTAGAAAGTTTGATCCATTCCTAGGTAAGATATAT < 41bp 1 0.016054118645578 1 0.0899722576141357 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP3 ENSG00000140455 CDS Human protein_coding chr15:63866342 chr15:63866324 nonsynonymous SNV 0.999 2 3 hm5C_associated_SNPs_19158 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63866324-63866348
64251 chr2 27440801 27440801 1 + G A COAD 27440789 + 27440769 27440809 41 ACCCCGAGGCCCTCACCGATCCCTCCTACAAGGCACAGATC ACCCCGAGGCCCTCACCGATCCCTCCTACAAGACACAGATC < 41bp 1 0.0420758146333295 1 0.277431845664978 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27440789 chr2:27440801 nonsynonymous SNV 0.994 3 33 hm5C_associated_SNPs_19159 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:27440796-27440824
64251 chr6 64423356 64423356 1 + G T COAD 64423358 + 64423338 64423378 41 AGCCAAGACAAGGACAGAGACAGAAAAAGCAGGGAGGAAGG AGCCAAGACAAGGACAGATACAGAAAAAGCAGGGAGGAAGG < 41bp 1 0.781844740357937 1 0.516785442829132 experiment 0.436310519284127 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64423358 chr6:64423356 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_19161 0 0 1 GPKOW POSTAR2 ENCODE chr6:64423352-64423416
64251 chr9 72879294 72879294 1 + C T COAD 72879285 + 72879265 72879305 41 GATCGTTGGAGCCAATGGAACAGGGAAGTCGAGCATTGTGT GATCGTTGGAGCCAATGGAACAGGGAAGTTGAGCATTGTGT < 41bp 1 0.773110922756758 1 0.740669786930084 experiment 0.453778154486483 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC5 ENSG00000198887 CDS Human protein_coding chr9:72879285 chr9:72879294 nonsynonymous SNV 0.958 5 30 hm5C_associated_SNPs_19162 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:72879228-72879298
64251 chr2 138762743 138762743 1 + C A COAD 138762727 + 138762707 138762747 41 GTATTATGTAAAAGACATCCCAGCTACCCTGAAATTCTTCC GTATTATGTAAAAGACATCCCAGCTACCCTGAAATTATTCC < 41bp 1 0.247818474199714 1 0.353600829839706 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HNMT ENSG00000150540 CDS Human protein_coding chr2:138762727 chr2:138762743 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_19163 0 0 2 EIF3H POSTAR2 ENCODE chr2:138762736-138762786
64251 chr17 78319225 78319225 1 + G A COAD 78319214 + 78319194 78319234 41 CCTGCTGCTCCAGAGGGTGCCCTTCAATGTCGACTTTGATA CCTGCTGCTCCAGAGGGTGCCCTTCAATGTCAACTTTGATA < 41bp 1 0.00440811105787634 1 0.0282165110111237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78319214 chr17:78319225 nonsynonymous SNV 0.152 0 32 hm5C_associated_SNPs_19165 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78319219-78319235
64251 chr19 49469171 49469171 1 + A G COAD 49469156 + 49469136 49469176 41 ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTA ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCGAGGTA < 41bp 1 0.415968600907625 1 0.136418610811234 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469156 chr19:49469171 nonsynonymous SNV 0.569 0 36 hm5C_associated_SNPs_19166 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr19 49469171 49469171 1 + A G COAD 49469161 + 49469141 49469181 41 CGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTAACTAG CGTGGCGGCCGCGCTCTCTTCCAGGACATCGAGGTAACTAG < 41bp 1 0.681665743923662 1 0.803046584129333 experiment 0.636668512152677 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469161 chr19:49469171 nonsynonymous SNV 0.569 0 31 hm5C_associated_SNPs_19167 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr14 24569454 24569454 1 + T C COAD 24569453 + 24569433 24569473 41 TGGGGAAGGTGTGGCACAGCCTCCAGGCCTCAGCACCTTAA TGGGGAAGGTGTGGCACAGCCCCCAGGCCTCAGCACCTTAA < 41bp 1 0.633841069764543 1 0.64246529340744 experiment 0.732317860470914 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout PCK2 ENSG00000100889 CDS Human protein_coding chr14:24569453 chr14:24569454 synonymous SNV . 0 22 hm5C_associated_SNPs_19170 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24569384-24569457
64251 chr2 201436936 201436936 1 + A C COAD 201436921 + 201436901 201436941 41 AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATAATTTCT AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATACTTTCT < 41bp 1 0.745109146503055 1 0.624448657035828 experiment 0.509781706993891 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436921 chr2:201436936 nonsynonymous SNV 0.998 2 36 hm5C_associated_SNPs_19173 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201436902-201436953
64251 chr19 57910659 57910659 1 + G T COAD 57910662 + 57910642 57910682 41 AGTTCACACCGGAGAAAGACCTTATAAGTGCAATGATTGTG AGTTCACACCGGAGAAATACCTTATAAGTGCAATGATTGTG < 41bp 1 0.152596343884014 1 0.0931307971477509 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57910662 chr19:57910659 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_19174 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr19:57910655-57910688
64251 chr5 71493385 71493385 1 + G A COAD 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCCACCCCTCATTGGATC < 41bp 1 0.187985136596787 1 0.319209814071655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493385 synonymous SNV . 0 27 hm5C_associated_SNPs_19175 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493385 71493385 1 + G A COAD 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCACCCCTCATTGGATCCGAG < 41bp 1 0.0237294695643359 1 0.0625238716602325 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493385 synonymous SNV . 0 23 hm5C_associated_SNPs_19176 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr22 42042972 42042972 1 + G T COAD 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAATCCTCCTCCAATAAAGCTCTATCGG < 41bp 1 0.13448940973726 1 0.392212569713593 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042972 nonsynonymous SNV 0.357 4 17 hm5C_associated_SNPs_19177 0 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr22:42042960-42042980
64251 chr15 90617494 90617494 1 + C T COAD 90617476 + 90617456 90617496 41 AAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCATGGCGT AAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCATGGTGT < 41bp 1 0.430577415118398 1 0.182442873716354 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90617476 chr15:90617494 synonymous SNV . 0 39 hm5C_associated_SNPs_19178 0 0 1 PRPF8 POSTAR2 ENCODE chr15:90617484-90617573
64251 chr17 71239108 71239108 1 + C T COAD 71239105 + 71239085 71239125 41 ACGATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG ACGATGCTCTTCACAGGATACTTTGTCCTGTGTTGTAGCTG < 41bp 1 0.19691800652301 1 0.0166423320770264 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71239105 chr17:71239108 synonymous SNV . 0 24 hm5C_associated_SNPs_19179 0 0 2 PPIG POSTAR2 ENCODE chr17:71239026-71239127
64251 chr1 183103801 183103801 1 + G A COAD 183103802 + 183103782 183103822 41 TTGCTTTTCACAGAATGAAGCAAATAACATAAAGATGGAAG TTGCTTTTCACAGAATGAAACAAATAACATAAAGATGGAAG < 41bp 1 0.038256596782195 1 0.513730823993683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183103802 chr1:183103801 nonsynonymous SNV 0.998 1 20 hm5C_associated_SNPs_19180 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:183103800-183103820
64251 chr17 4926869 4926869 1 + G A COAD 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCCGTCAGCCCAGCCCCCCTCGCCACCACTGTCA < 41bp 1 0.0905111053590225 1 0.0177196860313416 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926869 nonsynonymous SNV 0.058 0 19 hm5C_associated_SNPs_19183 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4926776-4926877
64251 chr17 4926869 4926869 1 + G A COAD 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCCGTCAGCCCAGCCCCCCTCGCCACCACTGTCAAGC < 41bp 1 0.0840725404523097 1 0.0279622972011566 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926869 nonsynonymous SNV 0.058 0 16 hm5C_associated_SNPs_19184 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4926776-4926877
64251 chr17 4926869 4926869 1 + G A COAD 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG CGTCAGCCCAGCCCCCCTCGCCACCACTGTCAAGCTGGGAG < 41bp 1 0.0727940589266488 1 0.170629858970642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926869 nonsynonymous SNV 0.058 0 10 hm5C_associated_SNPs_19185 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4926776-4926877
64251 chr17 4926869 4926869 1 + G A COAD 4926881 + 4926861 4926901 41 GTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGC GTCAGCCCAGCCCCCCTCGCCACCACTGTCAAGCTGGGAGC < 41bp 1 0.713200127936002 1 0.555813670158386 experiment 0.573599744127996 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926881 chr17:4926869 nonsynonymous SNV 0.058 0 9 hm5C_associated_SNPs_19186 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4926776-4926877
64251 chr17 4926869 4926869 1 + G A COAD 4926883 + 4926863 4926903 41 CAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG CAGCCCAGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG < 41bp 1 0.161809718213094 1 0.0507593750953674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926883 chr17:4926869 nonsynonymous SNV 0.058 0 7 hm5C_associated_SNPs_19187 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4926776-4926877
64251 chr19 54969690 54969690 1 + A G COAD 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCGCAAGGTCGCCCTCAAGGCCGTGATCAAAAC < 41bp 1 0.120627919091601 1 0.28127783536911 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969690 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_19188 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:54969680-54969720
64251 chr16 28970042 28970042 1 + A G COAD 28970039 + 28970019 28970059 41 TTGTTGTCCCCATCCCTAGTCGGAGCCCCTGCAGAGTGTGG TTGTTGTCCCCATCCCTAGTCGGGGCCCCTGCAGAGTGTGG < 41bp 1 0.735498207522999 1 0.932407855987549 experiment 0.529003584954003 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970039 chr16:28970042 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_19189 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:28970015-28970050
64251 chr1 16778426 16778426 1 + A G COAD 16778415 + 16778395 16778435 41 GCTGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCA GCTGAGCCTGCTTCCCCCTCCCCCAGGGGGGGAAACCTCCA < 41bp 1 0.739081132349245 1 0.383174419403076 experiment 0.521837735301511 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778415 chr1:16778426 nonsynonymous SNV 0.906 1 32 hm5C_associated_SNPs_19190 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778426 16778426 1 + A G COAD 16778416 + 16778396 16778436 41 CTGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCAC CTGAGCCTGCTTCCCCCTCCCCCAGGGGGGGAAACCTCCAC < 41bp 1 0.678056908606644 1 0.502085387706757 experiment 0.643886182786712 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778416 chr1:16778426 nonsynonymous SNV 0.906 1 31 hm5C_associated_SNPs_19191 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778426 16778426 1 + A G COAD 16778417 + 16778397 16778437 41 TGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCACC TGAGCCTGCTTCCCCCTCCCCCAGGGGGGGAAACCTCCACC < 41bp 1 0.71950325389472 1 0.41720986366272 experiment 0.56099349221056 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778417 chr1:16778426 nonsynonymous SNV 0.906 1 30 hm5C_associated_SNPs_19192 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr6 151670304 151670304 1 + C T COAD 151670287 + 151670267 151670307 41 AAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAG AAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCTAAG < 41bp 1 0.286359832058157 1 0.140064179897308 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670287 chr6:151670304 stopgain 0.001 0 38 hm5C_associated_SNPs_19193 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:151670277-151670305
64251 chr4 160264476 160264476 1 + A G COAD 160264487 + 160264467 160264507 41 TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTG TGAGAAGCTGAGGATGATTGCAAAAGAAATTCGTCACGTTG < 41bp 1 0.672128487898212 1 0.724372684955597 experiment 0.655743024203575 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160264487 chr4:160264476 synonymous SNV . 0 10 hm5C_associated_SNPs_19194 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:160264448-160264477
64251 chr12 132588983 132588983 1 + C T COAD 132588965 + 132588945 132588985 41 AGCCCAGTCCGGGGCCGGGGCAGGCCTTGCAGAATGTGCGT AGCCCAGTCCGGGGCCGGGGCAGGCCTTGCAGAATGTGTGT < 41bp 1 0.581068096812652 1 0.503284573554993 experiment 0.837863806374696 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588965 chr12:132588983 nonsynonymous SNV 0.327 3 39 hm5C_associated_SNPs_19196 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132588993 + 132588973 132589013 41 GCAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCC GCAGAATGTGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCC < 41bp 1 0.256982387688842 1 0.0426687598228455 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588993 chr12:132588983 nonsynonymous SNV 0.327 3 11 hm5C_associated_SNPs_19197 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132588994 + 132588974 132589014 41 CAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCT CAGAATGTGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCT < 41bp 1 0.223960249676631 1 0.0312614440917969 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588994 chr12:132588983 nonsynonymous SNV 0.327 3 10 hm5C_associated_SNPs_19198 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132588995 + 132588975 132589015 41 AGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTC AGAATGTGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTC < 41bp 1 0.308028746641791 1 0.0877669453620911 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588995 chr12:132588983 nonsynonymous SNV 0.327 3 9 hm5C_associated_SNPs_19199 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132588996 + 132588976 132589016 41 GAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCT GAATGTGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCT < 41bp 1 0.532371082573595 1 0.289343625307083 experiment 0.93525783485281 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588996 chr12:132588983 nonsynonymous SNV 0.327 3 8 hm5C_associated_SNPs_19200 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132589000 + 132588980 132589020 41 GTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAG GTGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAG < 41bp 1 0.27792595235868 1 0.198803216218948 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589000 chr12:132588983 nonsynonymous SNV 0.327 3 4 hm5C_associated_SNPs_19201 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr12 132588983 132588983 1 + C T COAD 132589001 + 132588981 132589021 41 TGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGC TGTGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGC < 41bp 1 0.386837288890342 1 0.618892967700958 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589001 chr12:132588983 nonsynonymous SNV 0.327 3 3 hm5C_associated_SNPs_19202 0 0 1 XRN2 POSTAR2 ENCODE chr12:132588983-132589005
64251 chr11 75279869 75279869 1 + G A COAD 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTCCTATACCGTGGGTGTCATGATGATGCACCAGACAGG < 41bp 1 0.545533548194266 1 0.249376326799393 experiment 0.908932903611467 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279869 nonsynonymous SNV 0.999 2 35 hm5C_associated_SNPs_19203 0 0 6 GEMIN5 POSTAR2 ENCODE chr11:75279823-75279875
64251 chr15 45003779 45003779 1 + T C COAD 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTCGCGCCACTCTCTCTTTCTGGCCTGGAGGCTATC < 41bp 1 0.141103287294592 1 0.0705050528049469 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003779 nonsynonymous SNV 0.003 3 13 hm5C_associated_SNPs_19210 0 0 49 PTBP1 POSTAR2 GSE19323,GSM480477 chr15:45003760-45003780
64251 chr9 140137109 140137109 1 + A G COAD 140137116 + 140137096 140137136 41 GACTGGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCC GACTGGGTCTGGGGTGGGTACCCTCCTCATCAGCAAGATCC < 41bp 1 0.15282727540135 1 0.0179305076599121 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137116 chr9:140137109 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_19211 0 0 27 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137080-140137140
64251 chr9 140137109 140137109 1 + A G COAD 140137120 + 140137100 140137140 41 GGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCCGGGA GGGTCTGGGGTGGGTACCCTCCTCATCAGCAAGATCCGGGA < 41bp 1 0.70175523379888 1 0.759754061698914 experiment 0.596489532402241 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137120 chr9:140137109 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_19212 0 0 27 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137080-140137140
64251 chr3 31658482 31658482 1 + A G COAD 31658471 + 31658451 31658491 41 TCTTGCAGTATCTGAGAGACCGATTAACAAAACAAGAGTTC TCTTGCAGTATCTGAGAGACCGATTAACAAAGCAAGAGTTC < 41bp 1 0.312553303298285 1 0.293170511722565 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31658471 chr3:31658482 synonymous SNV . 0 32 hm5C_associated_SNPs_19222 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:31658444-31658483
64251 chr5 139893011 139893011 1 + G A COAD 139893005 + 139892985 139893025 41 TTGTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG TTGTGAAGGCTAAAGACCAGCAAGCTACAGAAGCAAATAAG < 41bp 1 0.177506612548483 1 0.465480446815491 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139893005 chr5:139893011 nonsynonymous SNV 0.997 3 27 hm5C_associated_SNPs_19223 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:139892991-139893012
64251 chr1 43900106 43900106 1 + C T COAD 43900109 + 43900089 43900129 41 CTGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCGAGTT CTGAGTGTCGCCACCTGTAGCAGCTCCTGGTGAGGCGAGTT < 41bp 1 0.145133732244385 1 0.444077521562576 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43900109 chr1:43900106 stopgain 1.000 1 18 hm5C_associated_SNPs_19224 0 0 1 BUD13 POSTAR2 ENCODE chr1:43900047-43900177
64251 chr6 41557797 41557797 1 + G A COAD 41557781 + 41557761 41557801 41 TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCCGCAGC TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCCACAGC < 41bp 1 0.110182142694698 1 0.0318504869937897 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXP4 ENSG00000137166 CDS Human protein_coding chr6:41557781 chr6:41557797 nonsynonymous SNV 0.388 3 37 hm5C_associated_SNPs_19225 0 0 2 DDX24 POSTAR2 ENCODE chr6:41557752-41557874
64251 chr9 2186139 2186139 1 + C T COAD 2186154 + 2186134 2186174 41 GAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG GAGTGTCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG < 41bp 1 0.226526333162229 1 0.0902314484119415 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186154 chr9:2186139 nonsynonymous SNV 0.998 1 6 hm5C_associated_SNPs_19226 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:2186132-2186159
64251 chr9 2186139 2186139 1 + C T COAD 2186155 + 2186135 2186175 41 AGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGGA AGTGTCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGGA < 41bp 1 0.310851358833779 1 0.728354454040527 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186155 chr9:2186139 nonsynonymous SNV 0.998 1 5 hm5C_associated_SNPs_19227 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:2186132-2186159
64251 chr17 38142927 38142927 1 + G A COAD 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCCTATCTCCAACTCCTCATGGTCATCTTCATGATGAA < 41bp 1 0.331353034285213 1 0.0825774073600769 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142927 nonsynonymous SNV 0.782 1 22 hm5C_associated_SNPs_19228 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr19 30499995 30499995 1 + C T COAD 30500003 + 30499983 30500023 41 CAAATGTGAATGCGATGCATCAAGTAACAGACTCTCATACT CAAATGTGAATGTGATGCATCAAGTAACAGACTCTCATACT < 41bp 1 0.524228726853102 1 0.191622018814087 experiment 0.951542546293797 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30500003 chr19:30499995 nonsynonymous SNV 0.003 0 13 hm5C_associated_SNPs_19229 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30499884-30500263
64251 chr19 18968311 18968311 1 + C T COAD 18968319 + 18968299 18968339 41 CAACATCTTCTACGAGGGCTCCCTCCAGAATGGTGTCACTG CAACATCTTCTATGAGGGCTCCCTCCAGAATGGTGTCACTG < 41bp 1 0.0265102096739236 1 0.0556504726409912 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18968319 chr19:18968311 synonymous SNV . 0 13 hm5C_associated_SNPs_19230 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr19:18968288-18968312
64251 chr6 32134500 32134500 1 + C T COAD 32134481 + 32134461 32134501 41 CGGGCGCTGTGTTCCAGGACCATGTACCGCGTTATGTGGCG CGGGCGCTGTGTTCCAGGACCATGTACCGCGTTATGTGGTG < 41bp 1 0.197577943611863 1 0.125144213438034 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134481 chr6:32134500 nonsynonymous SNV 0.937 3 40 hm5C_associated_SNPs_19231 0 0 2 EFTUD2 POSTAR2 ENCODE chr6:32134490-32134518
64251 chr19 41811655 41811655 1 + A T COAD 41811651 + 41811631 41811671 41 CACAGCCCCACCGCCTCCACCTCCACCACCACCTGCCTACA CACAGCCCCACCGCCTCCACCTCCTCCACCACCTGCCTACA < 41bp 1 0.295122896833052 1 0.264297634363174 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41811651 chr19:41811655 synonymous SNV 0.962 0 25 hm5C_associated_SNPs_19232 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:41811627-41811687
64251 chr12 31242070 31242070 1 + C T COAD 31242078 + 31242058 31242098 41 TCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCC TCGGCTGGTCTCTCTTGGCTCCCGGCAGGTAAACAGTAGCC < 41bp 1 0.453747566943936 1 0.233781278133392 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242078 chr12:31242070 synonymous SNV . 0 13 hm5C_associated_SNPs_19234 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:31242044-31242075
64251 chr9 110068775 110068775 1 + C A COAD 110068756 + 110068736 110068776 41 CCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCT CCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCAT < 41bp 1 0.726862020549499 1 0.388337165117264 experiment 0.546275958901002 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068756 chr9:110068775 nonsynonymous SNV 0.091 3 40 hm5C_associated_SNPs_19235 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:110068750-110068791
64251 chr2 167108302 167108302 1 - C T COAD 167108313 - 167108293 167108333 41 AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAG AGAAGAAGCAGAGGCTGAACCTATGAATTCCAATGAGCCAG < 41bp 1 0.405400920038072 1 0.538301408290863 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SCN9A ENSG00000169432 CDS Human protein_coding chr2:167108313 chr2:167108302 nonsynonymous SNV 0.978 2 32 hm5C_associated_SNPs_19236 0 0 1 EIF3H POSTAR2 ENCODE chr2:167108274-167108304
64251 chr19 58757774 58757774 1 + G T COAD 58757778 + 58757758 58757798 41 TGACACTGGAGACCTGGGAGCATATTGTCTCCCTGGGTAAG TGACACTGGAGACCTGTGAGCATATTGTCTCCCTGGGTAAG < 41bp 1 0.261688994448973 1 0.0678814947605133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58757778 chr19:58757774 nonsynonymous SNV 0.062 0 17 hm5C_associated_SNPs_19237 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58757677-58757776
64251 chr10 103901206 103901206 1 + C T COAD 103901207 + 103901187 103901227 41 TTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGC TTCCACATGTACCTATGGGTCCTTGGGATGGGGCCCAGGGC < 41bp 1 0.0729709910579714 1 0.0655192732810974 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901207 chr10:103901206 nonsynonymous SNV 0.967 0 20 hm5C_associated_SNPs_19238 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chr10 103901206 103901206 1 + C T COAD 103901208 + 103901188 103901228 41 TCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGCC TCCACATGTACCTATGGGTCCTTGGGATGGGGCCCAGGGCC < 41bp 1 0.409078473025292 1 0.290769249200821 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901208 chr10:103901206 nonsynonymous SNV 0.967 0 19 hm5C_associated_SNPs_19239 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chr10 103901206 103901206 1 + C T COAD 103901220 + 103901200 103901240 41 TATGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCC TATGGGTCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCC < 41bp 1 0.162308042889955 1 0.331868410110474 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901220 chr10:103901206 nonsynonymous SNV 0.967 0 7 hm5C_associated_SNPs_19240 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chr10 103901206 103901206 1 + C T COAD 103901221 + 103901201 103901241 41 ATGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCA ATGGGTCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCA < 41bp 1 0.353922347379593 1 0.537227153778076 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901221 chr10:103901206 nonsynonymous SNV 0.967 0 6 hm5C_associated_SNPs_19241 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chr10 103901206 103901206 1 + C T COAD 103901222 + 103901202 103901242 41 TGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCAT TGGGTCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCAT < 41bp 1 0.596852037659567 1 0.777356505393982 experiment 0.806295924680867 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901222 chr10:103901206 nonsynonymous SNV 0.967 0 5 hm5C_associated_SNPs_19242 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103901186-103901216
64251 chr17 41570084 41570084 1 + G A COAD 41570095 + 41570075 41570115 41 GTCGAAGCCGAGATCGAAACCGAGATCGAGACAGAGATAGG GTCGAAGCCAAGATCGAAACCGAGATCGAGACAGAGATAGG < 41bp 1 0.782407624530167 1 0.79532778263092 experiment 0.435184750939666 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570095 chr17:41570084 nonsynonymous SNV 0.979 0 10 hm5C_associated_SNPs_19243 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570077-41570134
64251 chr16 1411904 1411904 1 + G A COAD 1411910 + 1411890 1411930 41 GCCCGTTCCACAACGTGACCCAGCACGAGCAGACCTTCCGC GCCCGTTCCACAACATGACCCAGCACGAGCAGACCTTCCGC < 41bp 1 0.794104761981283 1 0.801838874816895 experiment 0.411790476037433 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPTG ENSG00000090581 CDS Human protein_coding chr16:1411910 chr16:1411904 nonsynonymous SNV 0.992 5 15 hm5C_associated_SNPs_19246 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr16:1411872-1411933
64251 chr7 157041169 157041169 1 + C T COAD 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGGACATTCACCACCTCGCCTCCCTAGATCCTGAGGTGTA < 41bp 1 0.295340907098155 1 0.156166225671768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041169 synonymous SNV . 0 30 hm5C_associated_SNPs_19253 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr7:157041121-157041171
64251 chr11 44129682 44129682 1 + T C COAD 44129673 + 44129653 44129693 41 AATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACAC AATGAACTGCTCATGGCCATCTCAGACAGCGACTACTACAC < 41bp 1 0.630205475900047 1 0.253000020980835 experiment 0.739589048199905 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129673 chr11:44129682 synonymous SNV . 0 30 hm5C_associated_SNPs_19254 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:44129680-44129700
64251 chr11 67818115 67818115 1 + G A COAD 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACTCTCAGCCTTCCTGCACACCCTGCGGC < 41bp 1 0.0378584397788592 1 0.485622823238373 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818115 nonsynonymous SNV 0.983 3 32 hm5C_associated_SNPs_19255 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818115 67818115 1 + G A COAD 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACTCTCAGCCTTCCTGCACACCCTGCGGCT < 41bp 1 0.152499267930062 1 0.614853620529175 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818115 nonsynonymous SNV 0.983 3 31 hm5C_associated_SNPs_19256 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr1 7796527 7796527 1 + C T COAD 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCTGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG < 41bp 1 0.27928224566241 1 0.239354640245438 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796527 nonsynonymous SNV 0.928 4 4 hm5C_associated_SNPs_19257 0 0 2 BUD13 POSTAR2 ENCODE chr1:7796466-7796582
64251 chr19 19646176 19646176 1 + C T COAD 19646174 + 19646154 19646194 41 ACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGC ACCCACCATCTTCTACCCCACATGCTCGCTGGACCTGCTGC < 41bp 1 0.139719786073222 1 0.043874204158783 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19646174 chr19:19646176 nonsynonymous SNV 0.037 4 23 hm5C_associated_SNPs_19259 0 0 2 EWSR1 POSTAR2 SRX029343 chr19:19646152-19646177
64251 chr11 86947694 86947694 1 + C T COAD 86947706 + 86947686 86947726 41 TTGTTTTGCATCACAGCTGCCATGTACATGTTCTTTTTCAG TTGTTTTGTATCACAGCTGCCATGTACATGTTCTTTTTCAG < 41bp 1 0.0525744090773568 1 0.0397069156169891 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86947706 chr11:86947694 synonymous SNV . 0 9 hm5C_associated_SNPs_19260 0 0 4 GRWD1 POSTAR2 ENCODE chr11:86947684-86947708
64251 chr6 27101078 27101078 1 + G A COAD 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAAACCC < 41bp 1 0.312732407375641 1 0.278098613023758 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101078 synonymous SNV . 0 37 hm5C_associated_SNPs_19261 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101078 27101078 1 + G A COAD 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAAACCCG < 41bp 1 0.386427232762153 1 0.157951146364212 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101078 synonymous SNV . 0 36 hm5C_associated_SNPs_19262 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr15 90771676 90771676 1 + T G COAD 90771692 + 90771672 90771712 41 CCACTCAACGGCCTAGGGCCCCCTAGCACCCCGCTCGATCA CCACGCAACGGCCTAGGGCCCCCTAGCACCCCGCTCGATCA < 41bp 1 0.292638232091716 1 0.180633038282394 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771692 chr15:90771676 nonsynonymous SNV 0.233 4 5 hm5C_associated_SNPs_19263 0 0 1 RPS3 POSTAR2 ENCODE chr15:90771632-90771689
64251 chr6 13616700 13616700 1 + A G COAD 13616704 + 13616684 13616724 41 CATTCCAAAAGAAAAGAAAACTCCTTCCAGACACTATTTTG CATTCCAAAAGAAAAGGAAACTCCTTCCAGACACTATTTTG < 41bp 1 0.317464542991144 1 0.104735612869263 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13616704 chr6:13616700 synonymous SNV . 0 17 hm5C_associated_SNPs_19264 0 0 4 AGGF1 POSTAR2 ENCODE chr6:13616698-13616758
64251 chr5 36985787 36985787 1 + G A COAD 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCGACATCGAGGAGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.147717490552791 1 0.0241758525371552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985787 synonymous SNV . 0 17 hm5C_associated_SNPs_19265 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:36985753-36985813
64251 chr1 155106006 155106006 1 + G T COAD 155106004 + 155105984 155106024 41 CCCATCCACCAGCATGAAGACCGCTGCTTGAGGTTGAAGGT CCCATCCACCAGCATGAAGACCTCTGCTTGAGGTTGAAGGT < 41bp 1 0.0518522286365555 1 0.106829732656479 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106004 chr1:155106006 nonsynonymous SNV 0.866 2 23 hm5C_associated_SNPs_19266 0 0 5 BUD13 POSTAR2 ENCODE chr1:155105924-155106018
64251 chr10 75871773 75871773 1 + C G COAD 75871762 + 75871742 75871782 41 GTCCCCCCTGACATGGAAGACGATTACGAACCTGAGCTGCT GTCCCCCCTGACATGGAAGACGATTACGAACGTGAGCTGCT < 41bp 1 0.0978466366300264 1 0.143677294254303 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871762 chr10:75871773 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_19267 1 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:75871765-75871791
64251 chr19 45412238 45412238 1 + G C COAD 45412227 + 45412207 45412247 41 CCAGCCGCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGC CCAGCCGCTACAGGAGCGGGCCCAGGCCTGGCGCGAGCGGC < 41bp 1 0.284374700146447 1 0.155136317014694 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control APOE ENSG00000130203 CDS Human protein_coding chr19:45412227 chr19:45412238 nonsynonymous SNV 0.009 0 32 hm5C_associated_SNPs_19268 0 0 12 DDX55 POSTAR2 ENCODE chr19:45412214-45412353
64251 chr19 45412238 45412238 1 + G C COAD 45412228 + 45412208 45412248 41 CAGCCGCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGCT CAGCCGCTACAGGAGCGGGCCCAGGCCTGGCGCGAGCGGCT < 41bp 1 0.471467880398102 1 0.283421695232391 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control APOE ENSG00000130203 CDS Human protein_coding chr19:45412228 chr19:45412238 nonsynonymous SNV 0.009 0 31 hm5C_associated_SNPs_19269 0 0 12 DDX55 POSTAR2 ENCODE chr19:45412214-45412353
64251 chr19 45412238 45412238 1 + G C COAD 45412229 + 45412209 45412249 41 AGCCGCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGCTG AGCCGCTACAGGAGCGGGCCCAGGCCTGGCGCGAGCGGCTG < 41bp 1 0.786822339000365 1 0.518598079681396 experiment 0.42635532199927 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control APOE ENSG00000130203 CDS Human protein_coding chr19:45412229 chr19:45412238 nonsynonymous SNV 0.009 0 30 hm5C_associated_SNPs_19270 0 0 12 DDX55 POSTAR2 ENCODE chr19:45412214-45412353
64251 chr19 45412238 45412238 1 + G C COAD 45412233 + 45412213 45412253 41 GCTACAGGAGCGGGCCCAGGCCTGGGGCGAGCGGCTGCGCG GCTACAGGAGCGGGCCCAGGCCTGGCGCGAGCGGCTGCGCG < 41bp 1 0.554726901306325 1 0.324853956699371 experiment 0.890546197387351 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control APOE ENSG00000130203 CDS Human protein_coding chr19:45412233 chr19:45412238 nonsynonymous SNV 0.009 0 26 hm5C_associated_SNPs_19271 0 0 12 DDX55 POSTAR2 ENCODE chr19:45412214-45412353
64251 chr8 56864609 56864609 1 + G T COAD 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGTGGGCTATTACATCTCTCCACGAATCACTTTTCCCT < 41bp 1 0.712168339248166 1 0.93351674079895 experiment 0.575663321503669 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864609 nonsynonymous SNV 0.995 4 6 hm5C_associated_SNPs_19272 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:56864580-56864609
64251 chr9 131218469 131218469 1 + G A COAD 131218480 + 131218460 131218500 41 CCATGGCACGACCCTGGCCTCCGACTTCAACGACTTCATAA CCATGGCACAACCCTGGCCTCCGACTTCAACGACTTCATAA < 41bp 1 0.207880587727687 1 0.0407792031764984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131218480 chr9:131218469 synonymous SNV . 0 10 hm5C_associated_SNPs_19273 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:131218469-131218497
64251 chr17 21731313 21731313 1 + G C COAD 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATCC < 41bp 1 0.162539565738647 1 0.187658935785294 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731313 synonymous SNV . 0 17 hm5C_associated_SNPs_19274 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr19 58290959 58290959 1 + A G COAD 58290970 + 58290950 58290990 41 TTATTATACATCTGAGAGTTCACACTGGAGAAAGGCCTTAT TTATTATACGTCTGAGAGTTCACACTGGAGAAAGGCCTTAT < 41bp 1 0.242324889598912 1 0.055432140827179 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58290970 chr19:58290959 nonsynonymous SNV 0.018 4 10 hm5C_associated_SNPs_19275 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:58290939-58290975
64251 chr7 98563387 98563387 1 + A G COAD 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATGAGCATGGAGGTGCGGAAGAACTT < 41bp 1 0.209216952076538 1 0.332551419734955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563387 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_19276 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr7:98563380-98563400
64251 chr16 66976106 66976106 1 + G A COAD 66976124 + 66976104 66976144 41 GCGGACTCCATGTTTGTGATCCCTGCACTCCAAGTAGCACA GCAGACTCCATGTTTGTGATCCCTGCACTCCAAGTAGCACA < 41bp 1 0.0935781720440251 1 0.0307653844356537 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66976124 chr16:66976106 synonymous SNV . 0 3 hm5C_associated_SNPs_19278 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:66976073-66976114
64251 chr11 65396091 65396091 1 + G A COAD 65396110 + 65396090 65396130 41 CGTTTCGTGCTGACCTACATCGCGCCCTGGCAGATCACCTG CATTTCGTGCTGACCTACATCGCGCCCTGGCAGATCACCTG < 41bp 1 0.458768486526883 1 0.665815472602844 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65396110 chr11:65396091 nonsynonymous SNV 0.960 3 2 hm5C_associated_SNPs_19279 0 0 1 PPIG POSTAR2 ENCODE chr11:65396063-65396102
64251 chr17 45773485 45773485 1 + T C COAD 45773473 + 45773453 45773493 41 GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGTTC GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGCCCATGTTC < 41bp 1 0.465293596503009 1 0.0643142461776733 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBKBP1 ENSG00000198933 CDS Human protein_coding chr17:45773473 chr17:45773485 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_19280 0 0 2 U2AF1 POSTAR2 ENCODE chr17:45773433-45773486
64251 chr10 93695423 93695423 1 + C T COAD 93695421 + 93695401 93695441 41 TTTGTTATTTCAGGCTAGATCGCCTTTTTATTTTACTGGAT TTTGTTATTTCAGGCTAGATCGTCTTTTTATTTTACTGGAT < 41bp 1 0.20380251012319 1 0.292532444000244 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93695421 chr10:93695423 synonymous SNV . 0 23 hm5C_associated_SNPs_19282 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:93695414-93695441
64251 chr17 21731315 21731315 1 + T C COAD 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCGGCACTCTTTCTGACTACAACATCC < 41bp 1 0.154645333777185 1 0.131098449230194 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731315 nonsynonymous SNV 0.963 0 19 hm5C_associated_SNPs_19283 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr3 169953102 169953102 1 + C T COAD 169953106 + 169953086 169953126 41 TGTGTTCTTTTGACAACGAACAGCTCTTCACCATGAAATGG TGTGTTCTTTTGACAATGAACAGCTCTTCACCATGAAATGG < 41bp 1 0.496889650156844 1 0.0670566260814667 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169953106 chr3:169953102 synonymous SNV . 0 17 hm5C_associated_SNPs_19286 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:169953080-169953119
64251 chr21 47842021 47842021 1 + C T COAD 47842001 + 47841981 47842021 41 GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGT < 41bp 1 0.0476674001819257 1 0.396171808242798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47842001 chr21:47842021 nonsynonymous SNV 0.003 0 41 hm5C_associated_SNPs_19289 1 0 2 PRPF8 POSTAR2 ENCODE chr21:47841987-47842095
64251 chr21 47769622 47769622 1 + A G COAD 47769611 + 47769591 47769631 41 TTTCTAGGGGCCCTTAGGAACCTGGAGAGTCATCATCAAGC TTTCTAGGGGCCCTTAGGAACCTGGAGAGTCGTCATCAAGC < 41bp 1 0.0756302259937096 1 0.162389099597931 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47769611 chr21:47769622 nonsynonymous SNV 0.008 1 32 hm5C_associated_SNPs_19290 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:47769605-47769626
64251 chr19 33581726 33581726 1 + A G COAD 33581723 + 33581703 33581743 41 TTTGTGTCTTCACGACAGAACAGAGCAGACAAATCTGTTCT TTTGTGTCTTCACGACAGAACAGGGCAGACAAATCTGTTCT < 41bp 1 0.643162758624754 1 0.797497391700745 experiment 0.713674482750493 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33581723 chr19:33581726 synonymous SNV . 0 24 hm5C_associated_SNPs_19291 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:33581720-33581740
64251 chrX 133511666 133511666 1 + C T COAD 133511658 + 133511638 133511678 41 TTTAAAAATCATGTCAAGCTCAGTTGAACAGAAAAAAGGGC TTTAAAAATCATGTCAAGCTCAGTTGAATAGAAAAAAGGGC < 41bp 1 0.222060621855524 1 0.398138523101807 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133511658 chrX:133511666 stopgain 1.000 1 29 hm5C_associated_SNPs_19292 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:133511636-133511669
64251 chr12 101674933 101674933 1 + G A COAD 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTAAT < 41bp 1 0.332971241450965 1 0.335434317588806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674933 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_19293 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chr19 4013016 4013016 1 + G T COAD 4013020 + 4013000 4013040 41 ACGAGCTCGTCACCAGGGCCCTCCAGCTGGTGCAGTTTGAC ACGAGCTCGTCACCAGTGCCCTCCAGCTGGTGCAGTTTGAC < 41bp 1 0.606043355830389 1 0.739099144935608 experiment 0.787913288339222 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PIAS4 ENSG00000105229 CDS Human protein_coding chr19:4013020 chr19:4013016 nonsynonymous SNV 0.973 4 17 hm5C_associated_SNPs_19294 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:4012998-4013041
64251 chr10 103291065 103291065 1 + A G COAD 103291084 + 103291064 103291104 41 TATCCTAAAATTATACAAGACATTGAGGTAAGAATCTATGT TGTCCTAAAATTATACAAGACATTGAGGTAAGAATCTATGT < 41bp 1 0.061760218422982 1 0.0174383223056793 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BTRC ENSG00000166167 CDS Human protein_coding chr10:103291084 chr10:103291065 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_19295 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103291058-103291082
64251 chr19 54967154 54967154 1 + G A COAD 54967152 + 54967132 54967172 41 TGCTGTATTCTCAGGCTGACCCGGGAGCCTGTGGCTGAGAG TGCTGTATTCTCAGGCTGACCCAGGAGCCTGTGGCTGAGAG < 41bp 1 0.35064688931904 1 0.485144704580307 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967152 chr19:54967154 nonsynonymous SNV 0.985 0 23 hm5C_associated_SNPs_19296 0 0 26 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:54967140-54967160
64251 chr9 33026975 33026975 1 + G C COAD 33026973 + 33026953 33026993 41 TTGGAGGAGGAGGAAGGATGCAGAGAGAAAGGAGAGGTAAG TTGGAGGAGGAGGAAGGATGCACAGAGAAAGGAGAGGTAAG < 41bp 1 0.596726564341537 1 0.522157967090607 experiment 0.806546871316927 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DNAJA1 ENSG00000086061 CDS Human protein_coding chr9:33026973 chr9:33026975 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_19299 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr9:33026934-33026979
64251 chr1 27088712 27088712 1 + G A COAD 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCCGCATCAGCCTTCCGGAGGACAGATA < 41bp 1 0.282542203813245 1 0.0762328207492828 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088712 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_19300 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:27088700-27088720
64251 chr11 107917094 107917094 1 + G A COAD 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGTTTATTAAGCAAGCACAGACAGTAAGTTCTACATGC < 41bp 1 0.223632520608126 1 0.2604740858078 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917094 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_19301 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr19 17887061 17887061 1 + C T COAD 17887060 + 17887040 17887080 41 CCCACTTTGTCCACAGGGCACCATGAAACGCCATTCTTCAC CCCACTTTGTCCACAGGGCACTATGAAACGCCATTCTTCAC < 41bp 1 0.158537138081199 1 0.0288088917732239 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887060 chr19:17887061 synonymous SNV . 0 22 hm5C_associated_SNPs_19302 0 0 2 PRPF8 POSTAR2 ENCODE chr19:17887023-17887085
64251 chr20 47707365 47707365 1 + G A COAD 47707353 + 47707333 47707373 41 CAAGGTTTTTATCTTCTAAACAGTATAATAGAGCACATGCC CAAGGTTTTTATCTTCTAAACAGTATAATAGAACACATGCC < 41bp 1 0.437245203487189 1 0.530844986438751 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47707353 chr20:47707365 synonymous SNV . 0 33 hm5C_associated_SNPs_19303 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:47707332-47707370
64251 chr16 29708349 29708349 1 + C T COAD 29708330 + 29708310 29708350 41 CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTCA CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTTA < 41bp 1 0.502304673661988 1 0.304864019155502 experiment 0.995390652676024 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708330 chr16:29708349 synonymous SNV . 0 40 hm5C_associated_SNPs_19304 0 0 4 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr5 10387137 10387137 1 + C T COAD 10387150 + 10387130 10387170 41 CTGGCTCCGTGAGCTCACTACTGACGCTGCCATTAGATATG CTGGCTCTGTGAGCTCACTACTGACGCTGCCATTAGATATG < 41bp 1 0.294496913195178 1 0.0984874665737152 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10387150 chr5:10387137 synonymous SNV . 0 8 hm5C_associated_SNPs_19306 0 0 25 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:10387115-10387146
64251 chr22 50861978 50861978 1 + C A COAD 50861963 + 50861943 50861983 41 CCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCAC CCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGATGCAC < 41bp 1 0.427623373866137 1 0.145799249410629 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50861963 chr22:50861978 nonsynonymous SNV 0.990 3 36 hm5C_associated_SNPs_19307 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50861959-50861981
64251 chr16 67319381 67319381 1 + G A COAD 67319380 + 67319360 67319400 41 TCCACTGCCACTTCTTCCTGCGTGAGCTGGAGGCTTGCACC TCCACTGCCACTTCTTCCTGCATGAGCTGGAGGCTTGCACC < 41bp 1 0.361157807254005 1 0.161538153886795 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67319380 chr16:67319381 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_19309 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67319349-67319387
64251 chr14 102476268 102476268 1 + C T COAD 102476275 + 102476255 102476295 41 TGAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC TGAACCCTGGCTATGCGGGCCGGTCTAACCTTCCTGACAAC < 41bp 1 0.040271529101288 1 0.230808734893799 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102476275 chr14:102476268 synonymous SNV . 0 14 hm5C_associated_SNPs_19311 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102476193-102476327
64251 chr1 16785425 16785425 1 + G A COAD 16785430 + 16785410 16785450 41 GACTTCTGGGAAGGCGCTCCCTCATCTGGGCCAAAGGAAGG GACTTCTGGGAAGGCACTCCCTCATCTGGGCCAAAGGAAGG < 41bp 1 0.541008932899322 1 0.142171174287796 experiment 0.917982134201356 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16785430 chr1:16785425 synonymous SNV . 0 16 hm5C_associated_SNPs_19316 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:16785397-16785429
64251 chr12 27835607 27835607 1 + G A COAD 27835622 + 27835602 27835642 41 GGGTTGATGGTCGAATGCTACATTACATGACTGTTGTAAGT GGGTTAATGGTCGAATGCTACATTACATGACTGTTGTAAGT < 41bp 1 0.20798896015511 1 0.176267266273499 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27835622 chr12:27835607 nonsynonymous SNV 0.992 3 6 hm5C_associated_SNPs_19320 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27835580-27835611
64251 chr7 94293215 94293215 1 + T C COAD 94293216 + 94293196 94293236 41 GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG GATTTCTCAGTTGATCGTGCCCGTGTCTGCTTCGTGACAAG < 41bp 1 0.146290384046099 1 0.0257938504219055 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293216 chr7:94293215 nonsynonymous SNV 0.824 0 20 hm5C_associated_SNPs_19321 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94293155-94293231
64251 chr5 159437637 159437637 1 + T C COAD 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCCGATC < 41bp 1 0.777224397472413 1 0.0830950140953064 experiment 0.445551205055174 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437637 synonymous SNV . 0 37 hm5C_associated_SNPs_19326 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:159437615-159437639
64251 chr16 28994545 28994545 1 + C T COAD 28994555 + 28994535 28994575 41 GCTCCACCGCCGAGGCCTTCCAGATCGTGCTGTCCCACCTG GCTCCACCGCTGAGGCCTTCCAGATCGTGCTGTCCCACCTG < 41bp 1 0.645743261940762 1 0.885396242141724 experiment 0.708513476118475 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28994555 chr16:28994545 synonymous SNV . 0 11 hm5C_associated_SNPs_19327 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:28994542-28994564
64251 chr3 25542766 25542766 1 + C G COAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGCGAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.288226697520176 1 0.100298523902893 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542766 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_19328 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr18 48604706 48604706 1 + G A COAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCTGGAGACCGGATTACCCAAGACAGAGCA < 41bp 1 0.50002800962329 1 0.627629995346069 experiment 0.99994398075342 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604706 nonsynonymous SNV 0.996 5 17 hm5C_associated_SNPs_19329 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:48604684-48604713
64251 chr17 57918652 57918652 1 + T C COAD 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT CTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT < 41bp 1 0.637449822057732 1 0.157491475343704 experiment 0.725100355884536 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918652 . . 0 1 hm5C_associated_SNPs_19331 0 0 70 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:57918622-57918660
64251 chr5 139909141 139909141 1 + T A COAD 139909148 + 139909128 139909168 41 TTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACT TTTGCCACCTACAATTGGCCCAGCCACACTTTTCAATCACT < 41bp 1 0.0619999190110229 1 0.129505187273026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139909148 chr5:139909141 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_19334 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:139909123-139909144
64251 chr7 44747515 44747515 1 + G A COAD 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCAGCA < 41bp 1 0.760544434291905 1 0.783935785293579 experiment 0.478911131416191 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747515 nonsynonymous SNV 0.986 4 38 hm5C_associated_SNPs_19335 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr6 33411575 33411575 1 + G C COAD 33411571 + 33411551 33411591 41 GCAGTTGACAGTCAGCGCAGCCCAGAAACCCCGGCCATCCA GCAGTTGACAGTCAGCGCAGCCCACAAACCCCGGCCATCCA < 41bp 1 0.0276173545490782 1 0.0545017123222351 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411571 chr6:33411575 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_19336 0 0 1 UCHL5 POSTAR2 ENCODE chr6:33411544-33411637
64251 chr1 53420447 53420447 1 + A G COAD 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGGAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.394704023480897 1 0.179698199033737 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420447 nonsynonymous SNV 0.999 3 3 hm5C_associated_SNPs_19337 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr6 36175100 36175100 1 + A G COAD 36175115 + 36175095 36175135 41 GCAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTGAAGT GCAGGGTGAGAAGACAAGTGCAGTGAAGGAGGAGCTGAAGT < 41bp 1 0.255181481668304 1 0.499629020690918 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36175115 chr6:36175100 nonsynonymous SNV 0.987 3 6 hm5C_associated_SNPs_19338 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:36175100-36175120
64251 chr2 203157515 203157515 1 + G T COAD 203157511 + 203157491 203157531 41 TTATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCT TTATACTAGGTGATTGAAATCTCTTAATATCGAACCCAGCT < 41bp 1 0.310499822590475 1 0.231705695390701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157511 chr2:203157515 stopgain 0.993 1 25 hm5C_associated_SNPs_19339 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:203157492-203157572
64251 chr2 203157515 203157515 1 + G T COAD 203157513 + 203157493 203157533 41 ATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCTCT ATACTAGGTGATTGAAATCTCTTAATATCGAACCCAGCTCT < 41bp 1 0.591144861523928 1 0.577799141407013 experiment 0.817710276952145 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157513 chr2:203157515 stopgain 0.993 1 23 hm5C_associated_SNPs_19340 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:203157492-203157572
64251 chr17 7836621 7836621 1 + T C COAD 7836604 + 7836584 7836624 41 CCGCCTCATGAAGGGTTAGACGGCTTCGCCCAAGAATTGAG CCGCCTCATGAAGGGTTAGACGGCTTCGCCCAAGAATCGAG < 41bp 1 0.572986121223362 1 0.293002486228943 experiment 0.854027757553275 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7836604 chr17:7836621 nonsynonymous SNV 0.963 3 38 hm5C_associated_SNPs_19341 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7836617-7836638
64251 chr3 101311560 101311560 1 + A C COAD 101311550 + 101311530 101311570 41 ATAACCAGAAGCTGTGGGAGCGAAATATAAAATCTCATCTT ATAACCAGAAGCTGTGGGAGCGAAATATAACATCTCATCTT < 41bp 1 0.744987840494502 1 0.533668696880341 experiment 0.510024319010997 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNP ENSG00000081154 CDS Human protein_coding chr3:101311550 chr3:101311560 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_19342 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101311540-101311571
64251 chr8 143782019 143782019 1 + A C COAD 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACCTGACTGCGAGACCACGAGATCCAGAGGACTCC < 41bp 1 0.397475661700531 1 0.0720551908016205 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782019 nonsynonymous SNV 0.190 1 22 hm5C_associated_SNPs_19343 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chr22 30074255 30074255 1 + C A COAD 30074250 + 30074230 30074270 41 TTCAACCTCATTGGTGACAGCCTGTCTTTCGACTTCAAAGA TTCAACCTCATTGGTGACAGCCTGTATTTCGACTTCAAAGA < 41bp 1 0.110460261569148 1 0.14758625626564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30074250 chr22:30074255 nonsynonymous SNV 0.997 4 26 hm5C_associated_SNPs_19344 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:30074238-30074258
64251 chr10 17276737 17276737 1 + C T COAD 17276740 + 17276720 17276760 41 GGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT GGAACAATGACGCCCTGTGCCAGGCAAAGCAGGAGTCCACT < 41bp 1 0.57338620703187 1 0.608495652675629 experiment 0.85322758593626 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276740 chr10:17276737 nonsynonymous SNV 0.997 5 18 hm5C_associated_SNPs_19347 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr10:17276691-17276742
64251 chr10 17276737 17276737 1 + C T COAD 17276757 + 17276737 17276777 41 CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT TGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT < 41bp 1 0.290174414969855 1 0.132398396730423 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276757 chr10:17276737 nonsynonymous SNV 0.997 5 1 hm5C_associated_SNPs_19348 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr10:17276691-17276742
64251 chr11 107917076 107917076 1 + T C COAD 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGCTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC < 41bp 1 0.421888566805512 1 0.399980247020721 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917076 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_19349 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr18 8114823 8114823 1 + A G COAD 8114803 + 8114783 8114823 41 ACACAGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAA ACACAGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAG < 41bp 1 0.174654527079759 1 0.0297829210758209 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRM ENSG00000173482 CDS Human protein_coding chr18:8114803 chr18:8114823 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_19350 0 0 2 BUD13 POSTAR2 ENCODE chr18:8114781-8114823
64251 chrX 70362053 70362053 1 + A G COAD 70362071 + 70362051 70362091 41 ATATTTGGACGCTACTGAGCCACCTGGAGGAACTGCTTGTG ATGTTTGGACGCTACTGAGCCACCTGGAGGAACTGCTTGTG < 41bp 1 0.452189284322752 1 0.276103258132935 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70362071 chrX:70362053 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_19351 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70362023-70362100
64251 chr1 120254720 120254720 1 + T C COAD 120254703 + 120254683 120254723 41 ACAGCCTGGACCCTTGCTGCCGGAAGATCTTGCAAGATGGA ACAGCCTGGACCCTTGCTGCCGGAAGATCTTGCAAGACGGA < 41bp 1 0.728845397561699 1 0.759811818599701 experiment 0.542309204876601 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120254703 chr1:120254720 synonymous SNV . 0 38 hm5C_associated_SNPs_19352 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:120254611-120254738
64251 chr7 27833978 27833978 1 + A G COAD 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAATGTCTTCACAAAGAAAACGGGGGATCAGCAGAAAGTGA < 41bp 1 0.773305009334613 1 0.728629767894745 experiment 0.453389981330774 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833978 nonsynonymous SNV 0.971 0 26 hm5C_associated_SNPs_19353 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833950-27833986
64251 chr15 93528753 93528753 1 + A G COAD 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGACAGTGACTCTGGCACTGAGTC < 41bp 1 0.248802107647081 1 0.0567079782485962 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528753 nonsynonymous SNV 0.997 2 32 hm5C_associated_SNPs_19354 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:93528734-93528759
64251 chr5 92923728 92923728 1 + C T COAD 92923717 + 92923697 92923737 41 AACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT AACGGCCACTGCTACCTGTCCGGCTACATCTTGCTGCTGCT < 41bp 1 0.361825386651176 1 0.320891737937927 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923717 chr5:92923728 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_19356 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:92923701-92923744
64251 chr4 26407847 26407847 1 + T G COAD 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAGCGAGGGGATCAAACAGTACTTAGTCTTCAT < 41bp 1 0.320441409805513 1 0.194055557250977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407847 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_19357 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:26407819-26407861
64251 chr10 75557825 75557825 1 + A G COAD 75557805 + 75557785 75557825 41 CTGGCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTA CTGGCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTG < 41bp 1 0.111474831604807 1 0.22045624256134 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557805 chr10:75557825 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_19358 0 0 2 DDX24 POSTAR2 ENCODE chr10:75557803-75557828
64251 chr8 26223885 26223885 1 + T G COAD 26223878 + 26223858 26223898 41 TGTTCACTGTATGAAAATGACTGCATATTTGACAAATTTGA TGTTCACTGTATGAAAATGACTGCATAGTTGACAAATTTGA < 41bp 1 0.506079999002433 1 0.0772775709629059 experiment 0.987840001995135 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223878 chr8:26223885 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_19359 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223885 26223885 1 + T G COAD 26223881 + 26223861 26223901 41 TCACTGTATGAAAATGACTGCATATTTGACAAATTTGAATG TCACTGTATGAAAATGACTGCATAGTTGACAAATTTGAATG < 41bp 1 0.137130447781031 1 0.115013241767883 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223881 chr8:26223885 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_19360 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223885 26223885 1 + T G COAD 26223890 + 26223870 26223910 41 GAAAATGACTGCATATTTGACAAATTTGAATGTTGTTGGAA GAAAATGACTGCATAGTTGACAAATTTGAATGTTGTTGGAA < 41bp 1 0.226981336069359 1 0.330736845731735 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223890 chr8:26223885 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_19361 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr12 94563003 94563003 1 + T C COAD 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTCTATGGCACCGTGGTAAT < 41bp 1 0.141046698443456 1 0.15627846121788 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563003 synonymous SNV . 0 24 hm5C_associated_SNPs_19362 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr9 100418018 100418018 1 + T G COAD 100418035 + 100418015 100418055 41 AACTTCCAGTTCCGTTGGAGCTGGGAAGATTGGTAAGTGAT AACGTCCAGTTCCGTTGGAGCTGGGAAGATTGGTAAGTGAT < 41bp 1 0.568249831344989 1 0.695029020309448 experiment 0.863500337310022 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100418035 chr9:100418018 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_19363 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:100418000-100418020
64251 chr3 4776946 4776946 1 + G A COAD 4776929 + 4776909 4776949 41 TCACCTTGACAAGGAGGGGGCTTCCAATCTAGTTATCGACC TCACCTTGACAAGGAGGGGGCTTCCAATCTAGTTATCAACC < 41bp 1 0.0224907510440298 1 0.0835446417331696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4776929 chr3:4776946 nonsynonymous SNV 0.855 5 38 hm5C_associated_SNPs_19364 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr3:4776929-4776950
64251 chr3 122399793 122399793 1 + G T COAD 122399812 + 122399792 122399832 41 AGAACTTGAACACCAAGTTGCAGATGTACTTCCAGAGCCCG ATAACTTGAACACCAAGTTGCAGATGTACTTCCAGAGCCCG < 41bp 1 0.392227309290257 1 0.36907035112381 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399812 chr3:122399793 nonsynonymous SNV 0.795 1 2 hm5C_associated_SNPs_19365 0 0 3 DDX3X POSTAR2 ENCODE chr3:122399731-122399804
64251 chr20 42249524 42249524 1 + G T COAD 42249532 + 42249512 42249552 41 TGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGC TGGCTCACGACATGAGACATCCACCTAAACCAGATTGATGC < 41bp 1 0.115605848658441 1 0.0567057728767395 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT52 ENSG00000101052 CDS Human protein_coding chr20:42249532 chr20:42249524 stopgain 0.791 0 13 hm5C_associated_SNPs_19366 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42249500-42249524
64251 chr12 22208509 22208509 1 + G A COAD 22208514 + 22208494 22208534 41 TCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATT TCTCTGTTGTGAGACACCATCAGTTTCGATGGAGTGAAATT < 41bp 1 0.346034440483047 1 0.158171236515045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22208514 chr12:22208509 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_19367 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:22208460-22208516
64251 chr7 129029019 129029019 1 + G T COAD 129029013 + 129028993 129029033 41 TCAAACAGGCAGAGTTTGGACGAAGAGAAATTGAAATTGCT TCAAACAGGCAGAGTTTGGACGAAGATAAATTGAAATTGCT < 41bp 1 0.297904467369258 1 0.305179834365845 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:129029013 chr7:129029019 stopgain 1.000 1 27 hm5C_associated_SNPs_19368 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:129028991-129029021
64251 chr2 216995653 216995653 1 + G T COAD 216995648 + 216995628 216995668 41 TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAG TCTCTAAAGTGGATGAGGAACAAATTAAATATAAATCGGAG < 41bp 1 0.325811627146229 1 0.476486444473267 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995648 chr2:216995653 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_19369 0 0 36 TARDBP POSTAR2 DRA001158,DRS012387 chr2:216995604-216995662
64251 chr7 134215408 134215408 1 + A C COAD 134215396 + 134215376 134215416 41 CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTGAAAG CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCACAGTGAAAG < 41bp 1 0.279557284960692 1 0.31738018989563 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134215396 chr7:134215408 nonsynonymous SNV 0.185 0 33 hm5C_associated_SNPs_19370 0 0 1 RPS3 POSTAR2 ENCODE chr7:134215403-134215440
64251 chr5 158696002 158696002 1 + G A COAD 158695994 + 158695974 158696014 41 CACACTTTCAGAAGATGATACTGTGCTCGATCTCAAACAGT CACACTTTCAGAAGATGATACTGTGCTCAATCTCAAACAGT < 41bp 1 0.320575039057658 1 0.0968188941478729 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158695994 chr5:158696002 nonsynonymous SNV 0.964 2 29 hm5C_associated_SNPs_19371 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:158695971-158696005
64251 chr3 142422794 142422794 1 + G T COAD 142422814 + 142422794 142422834 41 GAAGGGAATTCAACACTTACCCTGGCATTGGTATGGCAGCT TAAGGGAATTCAACACTTACCCTGGCATTGGTATGGCAGCT < 41bp 1 0.302823689630959 1 0.148215532302856 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLS1 ENSG00000120756 CDS Human protein_coding chr3:142422814 chr3:142422794 stopgain 1.000 1 1 hm5C_associated_SNPs_19372 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:142422792-142422821
64251 chr16 56501925 56501925 1 + C A COAD 56501910 + 56501890 56501930 41 TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTATTAAG < 41bp 1 0.540315558653331 1 0.925218939781189 experiment 0.919368882693338 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56501910 chr16:56501925 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_19375 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:56501906-56501926
64251 chr10 17272655 17272655 1 + G A COAD 17272665 + 17272645 17272685 41 TCAGATTGCAGGAGGAGATGCTTCAGAGAGAGGAAGCCGAA TCAGATTGCAAGAGGAGATGCTTCAGAGAGAGGAAGCCGAA < 41bp 1 0.468847916370163 1 0.219377368688583 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout VIM ENSG00000026025 CDS Human protein_coding chr10:17272665 chr10:17272655 synonymous SNV . 0 11 hm5C_associated_SNPs_19376 0 0 12 U2AF2 POSTAR2 GSE83923,CSM2221662 chr10:17272640-17272660
64251 chr11 65391072 65391072 1 + A G COAD 65391061 + 65391041 65391081 41 AAGGGCTTCTTCACTGACATCTGGGTCTTCCAGTTCTGCCT AAGGGCTTCTTCACTGACATCTGGGTCTTCCGGTTCTGCCT < 41bp 1 0.579609595124013 1 0.499529093503952 experiment 0.840780809751975 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65391061 chr11:65391072 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_19377 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:65391052-65391074
64251 chr15 65855202 65855202 1 + G A COAD 65855212 + 65855192 65855232 41 CTGACTGTGCGATTCTGTATCTTGGGAAAAGGCAAGTAAGA CTGACTGTGCAATTCTGTATCTTGGGAAAAGGCAAGTAAGA < 41bp 1 0.485342982647659 1 0.400516837835312 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HACD3 ENSG00000074696 CDS Human protein_coding chr15:65855212 chr15:65855202 nonsynonymous SNV 0.995 3 11 hm5C_associated_SNPs_19378 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:65855121-65855221
64251 chr17 4797387 4797387 1 + G A COAD 4797367 + 4797347 4797387 41 ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCA < 41bp 1 0.439405465520621 1 0.261125862598419 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797367 chr17:4797387 nonsynonymous SNV 0.997 3 41 hm5C_associated_SNPs_19379 0 0 1 PPIG POSTAR2 ENCODE chr17:4797349-4797387
64251 chr5 66432400 66432400 1 + A G COAD 66432398 + 66432378 66432418 41 TTCTTCCTTCTAGATGAGATCAACTGGCCTGAGAAGGATGA TTCTTCCTTCTAGATGAGATCAGCTGGCCTGAGAAGGATGA < 41bp 1 0.138443686305914 1 0.209422558546066 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAST4 ENSG00000069020 CDS Human protein_coding chr5:66432398 chr5:66432400 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_19381 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66432389-66432427
64251 chr8 100182336 100182336 1 + A G COAD 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACCAGTTGTTCCCTCTTTCAGC < 41bp 1 0.0815522941462324 1 0.0640579462051392 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182336 nonsynonymous SNV 0.998 0 27 hm5C_associated_SNPs_19384 0 0 1 EIF3D POSTAR2 ENCODE chr8:100182316-100182392
64251 chr11 65978616 65978616 1 + C A COAD 65978630 + 65978610 65978650 41 TCATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC TCATTTACTTAAGCGAGATGCCAACAAGCTGCAGATCATGC < 41bp 1 0.0134988741987436 1 0.0959980189800262 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978630 chr11:65978616 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_19385 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978616 65978616 1 + C A COAD 65978631 + 65978611 65978651 41 CATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT CATTTACTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT < 41bp 1 0.319553925211044 1 0.382912576198578 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978631 chr11:65978616 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_19386 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr1 28600559 28600559 1 + C T COAD 28600565 + 28600545 28600585 41 CCTCAGCTGACATCCTGGAGCCCTCTCCACACCCAGACATG CCTCAGCTGACATCTTGGAGCCCTCTCCACACCCAGACATG < 41bp 1 0.0236534435605204 1 0.0295820534229279 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28600565 chr1:28600559 synonymous SNV . 0 15 hm5C_associated_SNPs_19387 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr1:28600551-28600584
64251 chr7 102995377 102995377 1 + G T COAD 102995366 + 102995346 102995386 41 AAGTTGAAGATGACATTCAGCAACTTCTCAAGAAAATTAAT AAGTTGAAGATGACATTCAGCAACTTCTCAATAAAATTAAT < 41bp 1 0.311260497207512 1 0.0943071842193604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMC2 ENSG00000161057 CDS Human protein_coding chr7:102995366 chr7:102995377 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_19389 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:102995330-102995388
64251 chr4 56291563 56291563 1 + G A COAD 56291562 + 56291542 56291582 41 GTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATT GTGACAATCATAGGAGGCATCATTTTTTTGGCGTTTGCATT < 41bp 1 0.0864393196679213 1 0.132103383541107 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291562 chr4:56291563 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_19390 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:56291540-56291575
64251 chr13 20567815 20567815 1 + A G COAD 20567812 + 20567792 20567832 41 GTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGG GTAAGCTCTGTGAATGATGGCCAGTTAGAAAATACTGACGG < 41bp 1 0.170716466897071 1 0.351144969463348 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567812 chr13:20567815 synonymous SNV . 0 24 hm5C_associated_SNPs_19391 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567815 20567815 1 + A G COAD 20567813 + 20567793 20567833 41 TAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGG TAAGCTCTGTGAATGATGGCCAGTTAGAAAATACTGACGGG < 41bp 1 0.104919750442603 1 0.201974421739578 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567813 chr13:20567815 synonymous SNV . 0 23 hm5C_associated_SNPs_19392 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567815 20567815 1 + A G COAD 20567826 + 20567806 20567846 41 TGATGGCCAATTAGAAAATACTGACGGGCGAGATATGAACT TGATGGCCAGTTAGAAAATACTGACGGGCGAGATATGAACT < 41bp 1 0.175356610044226 1 0.123551398515701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567826 chr13:20567815 synonymous SNV . 0 10 hm5C_associated_SNPs_19393 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr5 176468200 176468200 1 + T G COAD 176468185 + 176468165 176468205 41 AACACCCAGTGTAAGGTTTGCTGCGCCTTGCTTATTTCTGA AACACCCAGTGTAAGGTTTGCTGCGCCTTGCTTATGTCTGA < 41bp 1 0.515723323866401 1 0.104960232973099 experiment 0.968553352267198 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176468185 chr5:176468200 nonsynonymous SNV 0.976 3 36 hm5C_associated_SNPs_19395 0 0 2 PPIG POSTAR2 ENCODE chr5:176468127-176468225
64251 chr4 42020145 42020145 1 + G T COAD 42020141 + 42020121 42020161 41 TTTACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACT TTTACAGCAGAAGGTATAGGCACATAACTCAAAGCTCCACT < 41bp 1 0.36386580890573 1 0.0623792111873627 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020141 chr4:42020145 stopgain 0.771 0 25 hm5C_associated_SNPs_19396 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr4 42020145 42020145 1 + G T COAD 42020143 + 42020123 42020163 41 TACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTA TACAGCAGAAGGTATAGGCACATAACTCAAAGCTCCACTTA < 41bp 1 0.419502299816418 1 0.0995650291442871 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020143 chr4:42020145 stopgain 0.771 0 23 hm5C_associated_SNPs_19397 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr19 2343247 2343247 1 + T C COAD 2343242 + 2343222 2343262 41 CTCCAGGATGCCCTGGGCATCGCCTTCTGCCTCTACATGCT CTCCAGGATGCCCTGGGCATCGCCTCCTGCCTCTACATGCT < 41bp 1 0.31566207179026 1 0.148010939359665 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2343242 chr19:2343247 . 0.999 3 26 hm5C_associated_SNPs_19398 0 0 8 BUD13 POSTAR2 ENCODE chr19:2343159-2343247
64251 chr2 32339825 32339825 1 + T G COAD 32339810 + 32339790 32339830 41 GGATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTA GGATCTGCAGGCCTTTCAGGCCACCATAGAGCACCGAGTTA < 41bp 1 0.0969304323284405 1 0.0487041771411896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339810 chr2:32339825 synonymous SNV . 0 36 hm5C_associated_SNPs_19399 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:32339815-32339854
64251 chr2 32339825 32339825 1 + T G COAD 32339811 + 32339791 32339831 41 GATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTAC GATCTGCAGGCCTTTCAGGCCACCATAGAGCACCGAGTTAC < 41bp 1 0.771913724531257 1 0.15081924200058 experiment 0.456172550937486 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339811 chr2:32339825 synonymous SNV . 0 35 hm5C_associated_SNPs_19400 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:32339815-32339854
64251 chr2 32339825 32339825 1 + T G COAD 32339813 + 32339793 32339833 41 TCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTACAG TCTGCAGGCCTTTCAGGCCACCATAGAGCACCGAGTTACAG < 41bp 1 0.261000719367733 1 0.0398304462432861 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339813 chr2:32339825 synonymous SNV . 0 33 hm5C_associated_SNPs_19401 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:32339815-32339854
64251 chr7 135291515 135291515 1 + G T COAD 135291502 + 135291482 135291522 41 GTGATTTCTGCATTAAGGATCAGAACTTGAAAAGAAATTAG GTGATTTCTGCATTAAGGATCAGAACTTGAAAATAAATTAG < 41bp 1 0.185299620212655 1 0.526934087276459 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291502 chr7:135291515 nonsynonymous SNV 0.552 0 34 hm5C_associated_SNPs_19402 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:135291500-135291520
64251 chr7 102109447 102109447 1 + G A COAD 102109445 + 102109425 102109465 41 GGCTTCTGCTGCGGGGTCATCCGAGCCCACAAGAAGGCCAT GGCTTCTGCTGCGGGGTCATCCAAGCCCACAAGAAGGCCAT < 41bp 1 0.266570044854815 1 0.756158590316772 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102109445 chr7:102109447 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_19404 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:102109432-102109457
64251 chr5 139889279 139889279 1 + G T COAD 139889265 + 139889245 139889285 41 AGCAGCTTCTGGAGGGTATGCAGAGGTTGGAAGAGTTCTTC AGCAGCTTCTGGAGGGTATGCAGAGGTTGGAAGATTTCTTC < 41bp 1 0.685951523104834 1 0.80791163444519 experiment 0.628096953790332 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889265 chr5:139889279 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_19406 0 0 1 FXR2 POSTAR2 ENCODE chr5:139889222-139889282
64251 chr22 40762493 40762493 1 + C T COAD 40762482 + 40762462 40762502 41 AGGTGTATCCCCTGTTAAAACCATATGAAAGCGTGATGAAG AGGTGTATCCCCTGTTAAAACCATATGAAAGTGTGATGAAG < 41bp 1 0.393452688627861 1 0.132406115531921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADSL ENSG00000239900 CDS Human protein_coding chr22:40762482 chr22:40762493 synonymous SNV . 0 32 hm5C_associated_SNPs_19408 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:40762446-40762627
64251 chr20 37662910 37662910 1 + G T COAD 37662905 + 37662885 37662925 41 CTACATGAGAGATGTGACTGCCATTGAATCGGCCTGGCTGT CTACATGAGAGATGTGACTGCCATTTAATCGGCCTGGCTGT < 41bp 1 0.0544600078275772 1 0.0557839274406433 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37662905 chr20:37662910 stopgain 0.997 1 26 hm5C_associated_SNPs_19409 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:37662887-37662922
64251 chr11 114273576 114273576 1 + A G COAD 114273562 + 114273542 114273582 41 CATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGT CATTTTAGGAAGTAGTCATGCCCCACAAGATGTCGGTTTGT < 41bp 1 0.522973506002198 1 0.12270188331604 experiment 0.954052987995604 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273562 chr11:114273576 nonsynonymous SNV 0.976 0 35 hm5C_associated_SNPs_19411 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273563 + 114273543 114273583 41 ATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGTC ATTTTAGGAAGTAGTCATGCCCCACAAGATGTCGGTTTGTC < 41bp 1 0.162596549081644 1 0.165751606225967 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273563 chr11:114273576 nonsynonymous SNV 0.976 0 34 hm5C_associated_SNPs_19412 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273583 + 114273563 114273603 41 CCCACAAGATGTCAGTTTGTCATATCCCCAACATCATGTTG CCCACAAGATGTCGGTTTGTCATATCCCCAACATCATGTTG < 41bp 1 0.3726065424054 1 0.167359471321106 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273583 chr11:114273576 nonsynonymous SNV 0.976 0 14 hm5C_associated_SNPs_19413 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273589 + 114273569 114273609 41 AGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT AGATGTCGGTTTGTCATATCCCCAACATCATGTTGGAAATT < 41bp 1 0.675109324681436 1 0.119529694318771 experiment 0.649781350637128 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273589 chr11:114273576 nonsynonymous SNV 0.976 0 8 hm5C_associated_SNPs_19414 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273590 + 114273570 114273610 41 GATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTC GATGTCGGTTTGTCATATCCCCAACATCATGTTGGAAATTC < 41bp 1 0.319738602323492 1 0.246921896934509 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273590 chr11:114273576 nonsynonymous SNV 0.976 0 7 hm5C_associated_SNPs_19415 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273591 + 114273571 114273611 41 ATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCA ATGTCGGTTTGTCATATCCCCAACATCATGTTGGAAATTCA < 41bp 1 0.711820930076237 1 0.25401371717453 experiment 0.576358139847526 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273591 chr11:114273576 nonsynonymous SNV 0.976 0 6 hm5C_associated_SNPs_19416 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr11 114273576 114273576 1 + A G COAD 114273594 + 114273574 114273614 41 TCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCAAGC TCGGTTTGTCATATCCCCAACATCATGTTGGAAATTCAAGC < 41bp 1 0.457865523908607 1 0.0931016504764557 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273594 chr11:114273576 nonsynonymous SNV 0.976 0 3 hm5C_associated_SNPs_19417 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:114273546-114273580
64251 chr20 39797439 39797439 1 + C T COAD 39797451 + 39797431 39797471 41 TACAAGGCCCAGAGGGAGGACGAGCTGACCTTCATCAAGAG TACAAGGCTCAGAGGGAGGACGAGCTGACCTTCATCAAGAG < 41bp 1 0.28721525702328 1 0.5980424284935 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39797451 chr20:39797439 synonymous SNV . 0 9 hm5C_associated_SNPs_19418 0 0 5 BUD13 POSTAR2 ENCODE chr20:39797413-39797457
64251 chr1 220964909 220964909 1 + A C COAD 220964927 + 220964907 220964947 41 TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTAC TGCCCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTAC < 41bp 1 0.463388345614385 1 0.118251293897629 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964927 chr1:220964909 nonsynonymous SNV 0.979 3 3 hm5C_associated_SNPs_19419 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220964900-220964929
64251 chr11 95546134 95546134 1 + C T COAD 95546139 + 95546119 95546159 41 CTTCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCA CTTCAAGATAAGATTTGACGCTTGGAACTTGAGAGGATTCA < 41bp 1 0.459065593193087 1 0.0649937689304352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95546139 chr11:95546134 stopgain 1.000 1 16 hm5C_associated_SNPs_19421 1 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:95546100-95546140
64251 chr5 128440938 128440938 1 + C A COAD 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTAAAGGTATTGGGAGCACGGTTCAAGAAATTGATTT < 41bp 1 0.602962388956561 1 0.454040825366974 experiment 0.794075222086879 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440938 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_19422 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:128440907-128440945
64251 chr15 78841257 78841257 1 + G T COAD 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAATAAAAAGAA < 41bp 1 0.692030373582266 1 0.479652613401413 experiment 0.615939252835468 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841257 stopgain 0.996 1 33 hm5C_associated_SNPs_19423 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr3 50257588 50257588 1 + C T COAD 50257570 + 50257550 50257590 41 TTGAGCTTCATCATCATTGACTGGGCCTCAGGGACCAGCCG TTGAGCTTCATCATCATTGACTGGGCCTCAGGGACCAGTCG < 41bp 1 0.581280879631893 1 0.361448287963867 experiment 0.837438240736214 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50257570 chr3:50257588 . . 0 39 hm5C_associated_SNPs_19424 0 0 3 DDX55 POSTAR2 ENCODE chr3:50257561-50257609
64251 chr15 59350594 59350594 1 + C T COAD 59350579 + 59350559 59350599 41 TACTGTAGTACCAACCACTTCTGCAAGAATGGAATCACAAG TACTGTAGTACCAACCACTTCTGCAAGAATGGAATTACAAG < 41bp 1 0.552216001219229 1 0.598207116127014 experiment 0.895567997561542 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RNF111 ENSG00000157450 CDS Human protein_coding chr15:59350579 chr15:59350594 nonsynonymous SNV 0.998 2 36 hm5C_associated_SNPs_19425 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:59350566-59350598
64251 chr5 64082392 64082392 1 + T G COAD 64082382 + 64082362 64082402 41 TCCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA TCCTTTTGATGACATCATTCCAAGGGAAATGAAAAGGCTGA < 41bp 1 0.454296141351361 1 0.825393915176392 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64082382 chr5:64082392 nonsynonymous SNV 0.972 1 31 hm5C_associated_SNPs_19427 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:64082348-64082392
64251 chr11 64054336 64054336 1 + A C COAD 64054320 + 64054300 64054340 41 CCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCT CCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGCACCT < 41bp 1 0.352578046187504 1 0.27825129032135 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPR137 ENSG00000173264 CDS Human protein_coding chr11:64054320 chr11:64054336 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_19428 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:64054327-64054343
64251 chr16 11066819 11066819 1 + A G COAD 11066834 + 11066814 11066854 41 GCACTACATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA GCACTGCATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA < 41bp 1 0.411952682490639 1 0.0276484787464142 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11066834 chr16:11066819 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_19429 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:11066817-11066855
64251 chr2 100007156 100007156 1 + A C COAD 100007146 + 100007126 100007166 41 AGGCCTCCTGTTACCTCCTCCTATGAAGGAATTACGAGTGA AGGCCTCCTGTTACCTCCTCCTATGAAGGACTTACGAGTGA < 41bp 1 0.326589613275862 1 0.216611117124557 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007146 chr2:100007156 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_19431 0 0 5 FXR2 POSTAR2 ENCODE chr2:100007092-100007162
64251 chr1 12061554 12061554 1 + T C COAD 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCCAGGCCGGGGACCGCATCTTCTTTGTGCCTGCTAAGGA < 41bp 1 0.31657386268396 1 0.0713164508342743 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061554 nonsynonymous SNV 0.999 5 31 hm5C_associated_SNPs_19433 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:12061545-12061583
64251 chr15 72855836 72855836 1 + A C COAD 72855834 + 72855814 72855854 41 TTCGCTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT TTCGCTGCAAATGTGGGCGCCACTTTTGGTAAGCAAGTGAT < 41bp 1 0.0910392318774425 1 0.161845207214355 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72855834 chr15:72855836 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_19434 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr15:72855786-72855837
64251 chr12 53671311 53671311 1 + A G COAD 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT GAGGAATTTGAAGTCGATGACCTGAACTATGAAGATAAACT < 41bp 1 0.0707197509883705 1 0.0586913228034973 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671311 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_19435 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53671280-53671320
64251 chr4 126337719 126337719 1 + G T COAD 126337729 + 126337709 126337749 41 GAGTAACACAGAGTCTGGATCGGGAAACAAAAGAGCGCTTT GAGTAACACATAGTCTGGATCGGGAAACAAAAGAGCGCTTT < 41bp 1 0.622321446556297 1 0.920305967330933 experiment 0.755357106887407 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126337729 chr4:126337719 nonsynonymous SNV 0.916 2 11 hm5C_associated_SNPs_19436 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126337719-126337730
64251 chr5 6746337 6746337 1 + G T COAD 6746347 + 6746327 6746367 41 TTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT TTGCATCCAATAATTGATGCCCGGAGAGCTGATGAAAACCT < 41bp 1 0.378847637846471 1 0.295552372932434 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746347 chr5:6746337 nonsynonymous SNV 0.999 3 11 hm5C_associated_SNPs_19438 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr5:6746320-6746340
64251 chr13 24823801 24823801 1 + A G COAD 24823790 + 24823770 24823810 41 TCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACC TCCTGAAGACTCGGTTGCTGCAGACCCCCAGGAGGAAGACC < 41bp 1 0.147621297909011 1 0.451532512903214 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPATA13 ENSG00000182957 CDS Human protein_coding chr13:24823790 chr13:24823801 nonsynonymous SNV 0.022 0 32 hm5C_associated_SNPs_19439 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:24823780-24823818
64251 chr8 26227835 26227835 1 + A C COAD 26227822 + 26227802 26227842 41 ATGAAATAAGTGTTGACAGCCTAGACTTCAATAAGAAAATC ATGAAATAAGTGTTGACAGCCTAGACTTCAATACGAAAATC < 41bp 1 0.66154483855453 1 0.246000736951828 experiment 0.676910322890941 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227822 chr8:26227835 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_19440 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:26227812-26227850
64251 chr14 37754636 37754636 1 + G T COAD 37754619 + 37754599 37754639 41 GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGGAAA GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGTAAA < 41bp 1 0.497936324337331 1 0.756223440170288 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37754619 chr14:37754636 stopgain 1.000 1 38 hm5C_associated_SNPs_19441 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr14:37754613-37754646
64251 chr1 39775920 39775920 1 + C T COAD 39775933 + 39775913 39775953 41 CTAGCTTCGATCCTCAGCACCAGGGGAGTGCCATCAGATTA CTAGCTTTGATCCTCAGCACCAGGGGAGTGCCATCAGATTA < 41bp 1 0.236849168115583 1 0.74539977312088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39775933 chr1:39775920 stopgain 0.542 0 8 hm5C_associated_SNPs_19442 0 0 11 DDX24 POSTAR2 ENCODE chr1:39775916-39776102
64251 chr3 39104659 39104659 1 + T C COAD 39104645 + 39104625 39104665 41 CTTTTCACAGCCGGTCGAGACTCTATCATAAGAATATGGAG CTTTTCACAGCCGGTCGAGACTCTATCATAAGAACATGGAG < 41bp 1 0.576342021139748 1 0.919161438941956 experiment 0.847315957720503 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR48 ENSG00000114742 CDS Human protein_coding chr3:39104645 chr3:39104659 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_19443 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:39104611-39104666
64251 chrX 100880741 100880741 1 + G T COAD 100880745 + 100880725 100880765 41 TTCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAAC TTCAGCGGGAAATGAATAAACCAAACTTCAGGTTCTGAAAC < 41bp 1 0.507542267838577 1 0.0513339638710022 experiment 0.984915464322846 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880745 chrX:100880741 stopgain 1.000 0 17 hm5C_associated_SNPs_19457 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:100880721-100880741
64251 chrX 100880741 100880741 1 + G T COAD 100880746 + 100880726 100880766 41 TCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACT TCAGCGGGAAATGAATAAACCAAACTTCAGGTTCTGAAACT < 41bp 1 0.290482033058882 1 0.243973404169083 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880746 chrX:100880741 stopgain 1.000 0 16 hm5C_associated_SNPs_19458 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:100880721-100880741
64251 chrX 100880741 100880741 1 + G T COAD 100880750 + 100880730 100880770 41 CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTT CGGGAAATGAATAAACCAAACTTCAGGTTCTGAAACTCCTT < 41bp 1 0.503169318543469 1 0.169223427772522 experiment 0.993661362913062 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880750 chrX:100880741 stopgain 1.000 0 12 hm5C_associated_SNPs_19459 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:100880721-100880741
64251 chrX 100880741 100880741 1 + G T COAD 100880753 + 100880733 100880773 41 GAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTTTTG GAAATGAATAAACCAAACTTCAGGTTCTGAAACTCCTTTTG < 41bp 1 0.636526063359437 1 0.473189771175385 experiment 0.726947873281127 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880753 chrX:100880741 stopgain 1.000 0 9 hm5C_associated_SNPs_19460 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:100880721-100880741
64251 chr2 118579619 118579619 1 + T C COAD 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCCGCCTGCTGGACCAT < 41bp 1 0.544471557385138 1 0.143178582191467 experiment 0.911056885229725 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579619 synonymous SNV . 0 29 hm5C_associated_SNPs_19461 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579554-118579619
64251 chr12 57892319 57892319 1 + A C COAD 57892311 + 57892291 57892331 41 GGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCAT GGACTAACCCCCCAGGAGATCTGCGACACGTACCACATCAT < 41bp 1 0.608133140404908 1 0.291155636310577 experiment 0.783733719190184 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57892311 chr12:57892319 nonsynonymous SNV 0.969 4 29 hm5C_associated_SNPs_19462 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57892236-57892339
64251 chr6 149691192 149691192 1 + T C COAD 149691182 + 149691162 149691202 41 TTCAGGTTTTACATGACCTGCGACAAAAATTCCCTGAAGTA TTCAGGTTTTACATGACCTGCGACAAAAATCCCCTGAAGTA < 41bp 1 0.571800780560525 1 0.148864388465881 experiment 0.856398438878949 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAB2 ENSG00000055208 CDS Human protein_coding chr6:149691182 chr6:149691192 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_19463 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr6:149691158-149691194
64251 chr3 126736356 126736356 1 + G A COAD 126736355 + 126736335 126736375 41 GCCCACCAGAGCTGGGGGAGCGGCCGGATGAGCTGGGCTTC GCCCACCAGAGCTGGGGGAGCAGCCGGATGAGCTGGGCTTC < 41bp 1 0.332063942315267 1 0.86019241809845 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126736355 chr3:126736356 nonsynonymous SNV 0.825 1 22 hm5C_associated_SNPs_19474 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126736354-126736372
64251 chr7 150725664 150725664 1 + C T COAD 150725672 + 150725652 150725692 41 GCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGCT GCAGGCTGCTACTGCCCCTCCGCTTCCAGACATTCTCAGCT < 41bp 1 0.133790267126984 1 0.319047689437866 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150725672 chr7:150725664 nonsynonymous SNV 0.001 1 13 hm5C_associated_SNPs_19476 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:150725659-150725695
64251 chr17 71239086 71239086 1 + C T COAD 71239105 + 71239085 71239125 41 ACGATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG ATGATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG < 41bp 1 0.36517298116137 1 0.0284791886806488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71239105 chr17:71239086 nonsynonymous SNV 0.812 3 2 hm5C_associated_SNPs_19477 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:71239060-71239086
64251 chr12 6618894 6618894 1 + G A COAD 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT ACCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT < 41bp 1 0.126159840663052 1 0.130006164312363 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618894 nonsynonymous SNV 0.993 1 1 hm5C_associated_SNPs_19478 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:6618878-6618914
64251 chr7 155532685 155532685 1 + C T COAD 155532698 + 155532678 155532718 41 CAGCAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGC CAGCAGCTGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGC < 41bp 1 0.300375792304171 1 0.320761442184448 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM33 ENSG00000184863 CDS Human protein_coding chr7:155532698 chr7:155532685 nonsynonymous SNV 0.880 4 8 hm5C_associated_SNPs_19479 0 0 1 UCHL5 POSTAR2 ENCODE chr7:155532624-155532705
64251 chr19 1360942 1360942 1 + G C COAD 1360960 + 1360940 1360980 41 CAGCACCGCCAGGCTGGGCCCGCCTCCCTCCCACGCCTCTG CACCACCGCCAGGCTGGGCCCGCCTCCCTCCCACGCCTCTG < 41bp 1 0.431009185904204 1 0.228221088647842 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MUM1 ENSG00000160953 CDS Human protein_coding chr19:1360960 chr19:1360942 nonsynonymous SNV 0.010 0 3 hm5C_associated_SNPs_19480 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1360942-1360985
64251 chr9 117063988 117063988 1 + C A COAD 117063993 + 117063973 117064013 41 CCCCAGAGGGCGGCCCGGCCCCCCGGTAGGTAACTGAGTGC CCCCAGAGGGCGGCCAGGCCCCCCGGTAGGTAACTGAGTGC < 41bp 1 0.408132368821325 1 0.220725566148758 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117063993 chr9:117063988 synonymous SNV . 0 16 hm5C_associated_SNPs_19482 0 0 10 BUD13 POSTAR2 ENCODE chr9:117063960-117063995
64251 chr14 71434934 71434934 1 + G A COAD 71434922 + 71434902 71434942 41 GTCACGTTTTCAGATTGGATCTGGTTCCTCGCGTCTTGGAA GTCACGTTTTCAGATTGGATCTGGTTCCTCGCATCTTGGAA < 41bp 1 0.15515746546452 1 0.403951704502106 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71434922 chr14:71434934 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_19486 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr14:71434914-71434940
64251 chr17 47119662 47119662 1 + G A COAD 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCAAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA < 41bp 1 0.124611040691689 1 0.2184057533741 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119662 nonsynonymous SNV 0.995 3 5 hm5C_associated_SNPs_19487 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr17 47119662 47119662 1 + G A COAD 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCAAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA < 41bp 1 0.338444754269074 1 0.296951651573181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119662 nonsynonymous SNV 0.995 3 4 hm5C_associated_SNPs_19488 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr16 16208700 16208700 1 + C T COAD 16208711 + 16208691 16208731 41 GTGGACCTGCTGCACAGCATCCTGCGGTCACCCATGAGCTT GTGGACCTGTTGCACAGCATCCTGCGGTCACCCATGAGCTT < 41bp 1 0.136145540082079 1 0.182287395000458 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16208711 chr16:16208700 synonymous SNV . 0 10 hm5C_associated_SNPs_19490 0 0 1 SND1 POSTAR2 ENCODE chr16:16208685-16208734
64251 chr17 55183946 55183946 1 + G A COAD 55183945 + 55183925 55183965 41 CGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAGGCCAGTCAG CGGTTGGCAAGGTTGCAGGTCATGTGTGTCAGGCCAGTCAG < 41bp 1 0.448118668221048 1 0.024834543466568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183945 chr17:55183946 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_19491 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr17 55183946 55183946 1 + G A COAD 55183959 + 55183939 55183979 41 GCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA GCAGGTCATGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA < 41bp 1 0.193316120917416 1 0.0421672463417053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183959 chr17:55183946 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_19492 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr19 18543839 18543839 1 + G A COAD 18543840 + 18543820 18543860 41 GAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG GAACCCCATCGGGCAGGGCACCGGCAGGGCTAATGTGAGTG < 41bp 1 0.172299327982922 1 0.148181319236755 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543840 chr19:18543839 nonsynonymous SNV 0.136 0 20 hm5C_associated_SNPs_19493 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 18543839 18543839 1 + G A COAD 18543841 + 18543821 18543861 41 AACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG AACCCCATCGGGCAGGGCACCGGCAGGGCTAATGTGAGTGG < 41bp 1 0.732077266159542 1 0.486918330192566 experiment 0.535845467680915 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543841 chr19:18543839 nonsynonymous SNV 0.136 0 19 hm5C_associated_SNPs_19494 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr22 23523632 23523632 1 + G A COAD 23523630 + 23523610 23523650 41 AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC AGGTCCAACTTCGAGCGGATCCACAAGGGCCATGGCCAGCC < 41bp 1 0.410660908326438 1 0.0528194308280945 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23523630 chr22:23523632 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_19495 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:23523631-23523632
64251 chr20 42341721 42341721 1 + C T COAD 42341738 + 42341718 42341758 41 TGTCCACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTG TGTTCACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTG < 41bp 1 0.0876228817810876 1 0.110028773546219 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341738 chr20:42341721 nonsynonymous SNV 0.781 0 4 hm5C_associated_SNPs_19498 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:42341657-42341738
64251 chr11 44092823 44092823 1 + C T COAD 44092826 + 44092806 44092846 41 GGCATCATTAACTTGGGCACCAGTGAGAACAAACTCTGCTT GGCATCATTAACTTGGGTACCAGTGAGAACAAACTCTGCTT < 41bp 1 0.486265038557209 1 0.655535638332367 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACCS ENSG00000110455 CDS Human protein_coding chr11:44092826 chr11:44092823 synonymous SNV . 0 18 hm5C_associated_SNPs_19499 0 0 5 BUD13 POSTAR2 ENCODE chr11:44092823-44092866
64251 chr5 10411478 10411478 1 + A G COAD 10411473 + 10411453 10411493 41 ATTCTTATTTATTGGGAGACCAGGAAGAAAATGAAAACAGT ATTCTTATTTATTGGGAGACCAGGAGGAAAATGAAAACAGT < 41bp 1 0.673420865754575 1 0.712770342826843 experiment 0.653158268490849 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411473 chr5:10411478 synonymous SNV . 0 26 hm5C_associated_SNPs_19500 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:10411446-10411479
64251 chr19 12734580 12734580 1 + T C COAD 12734581 + 12734561 12734601 41 GTGGGCTCTGCTGGCTCCTTCACAGAAGAAACTCTACAGAG GTGGGCTCTGCTGGCTCCTCCACAGAAGAAACTCTACAGAG < 41bp 1 0.599528875486703 1 0.730029225349426 experiment 0.800942249026594 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12734581 chr19:12734580 nonsynonymous SNV 0.973 3 20 hm5C_associated_SNPs_19501 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12734579-12734615
64251 chr11 985532 985532 1 + G A COAD 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCAAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA < 41bp 1 0.0480101828036929 1 0.0590404570102692 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985532 synonymous SNV . 0 8 hm5C_associated_SNPs_19503 0 0 3 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr5 172386920 172386920 1 + G A COAD 172386906 + 172386886 172386926 41 AATCCCTTCGTTACCTCGGACCGCAGTAAAAACCGCAAACG AATCCCTTCGTTACCTCGGACCGCAGTAAAAACCACAAACG < 41bp 1 0.630349822278422 1 0.272429913282394 experiment 0.739300355443155 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172386906 chr5:172386920 nonsynonymous SNV 0.708 1 35 hm5C_associated_SNPs_19504 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:172386915-172386930
64251 chr20 61450603 61450603 1 + G A COAD 61450587 + 61450567 61450607 41 TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAAC TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGAAAAC < 41bp 1 0.32623567035839 1 0.092151939868927 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450587 chr20:61450603 synonymous SNV . 0 37 hm5C_associated_SNPs_19506 0 0 4 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61450603 61450603 1 + G A COAD 61450588 + 61450568 61450608 41 GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACC GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGAAAACC < 41bp 1 0.175503594585563 1 0.237881541252136 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450588 chr20:61450603 synonymous SNV . 0 36 hm5C_associated_SNPs_19507 0 0 4 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr12 27788002 27788002 1 + C A COAD 27788020 + 27788000 27788040 41 CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA CCAAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA < 41bp 1 0.315873273532157 1 0.200463116168976 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27788020 chr12:27788002 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_19510 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27787892-27788054
64251 chr7 128407566 128407566 1 + C T COAD 128407572 + 128407552 128407592 41 GGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTTCGGGAT GGGTAAAGACAGAGTGAGAGCAGTTTGTTGAGTTTCGGGAT < 41bp 1 0.471077694695644 1 0.186092525720596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407572 chr7:128407566 stopgain 0.998 1 15 hm5C_associated_SNPs_19513 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr11 95561127 95561127 1 + G A COAD 95561126 + 95561106 95561146 41 GTAACACCTCCCTCCTCCAACGGTATTAATGAGGAGTTGTC GTAACACCTCCCTCCTCCAACAGTATTAATGAGGAGTTGTC < 41bp 1 0.594105513999683 1 0.142979264259338 experiment 0.811788972000633 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95561126 chr11:95561127 nonsynonymous SNV 0.049 0 22 hm5C_associated_SNPs_19514 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:95561102-95561127
64251 chr18 21098870 21098870 1 + G A COAD 21098888 + 21098868 21098908 41 ATGTTCTCTTCTTGAGGCATCATTCTCGGACCTCCAACAGC ATATTCTCTTCTTGAGGCATCATTCTCGGACCTCCAACAGC < 41bp 1 0.0625996601961816 1 0.0533639192581177 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21098888 chr18:21098870 nonsynonymous SNV 0.828 0 3 hm5C_associated_SNPs_19515 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:21098861-21098899
64251 chr19 2343237 2343237 1 + G A COAD 2343242 + 2343222 2343262 41 CTCCAGGATGCCCTGGGCATCGCCTTCTGCCTCTACATGCT CTCCAGGATGCCCTGAGCATCGCCTTCTGCCTCTACATGCT < 41bp 1 0.350049273928795 1 0.0768775045871735 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2343242 chr19:2343237 . 0.988 3 16 hm5C_associated_SNPs_19516 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:2343237-2343238
64251 chr19 41239114 41239114 1 + C T COAD 41239094 + 41239074 41239114 41 GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTCCCC GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTCCCT < 41bp 1 0.761831380459457 1 0.729471921920776 experiment 0.476337239081087 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239094 chr19:41239114 nonsynonymous SNV 0.965 4 41 hm5C_associated_SNPs_19517 0 0 1 PPIG POSTAR2 ENCODE chr19:41239058-41239174
64251 chr12 110456190 110456190 1 + C T COAD 110456173 + 110456153 110456193 41 CCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATC CCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGTATC < 41bp 1 0.380719438618989 1 0.605301380157471 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456173 chr12:110456190 synonymous SNV . 0 38 hm5C_associated_SNPs_19518 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr12 110456190 110456190 1 + C T COAD 110456174 + 110456154 110456194 41 CTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATCT CTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGTATCT < 41bp 1 0.311366857362149 1 0.151655048131943 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456174 chr12:110456190 synonymous SNV . 0 37 hm5C_associated_SNPs_19519 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr2 224824384 224824384 1 + C T COAD 224824387 + 224824367 224824407 41 AAAGTGAGGAGGCCAAACGCCAACAACTTGGGATAGAGAAA AAAGTGAGGAGGCCAAATGCCAACAACTTGGGATAGAGAAA < 41bp 1 0.670905694054055 1 0.368696302175522 experiment 0.65818861189189 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824387 chr2:224824384 nonsynonymous SNV 0.482 4 18 hm5C_associated_SNPs_19520 1 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:224824348-224824385
64251 chr5 122154692 122154692 1 + T C COAD 122154694 + 122154674 122154714 41 TCAGAACTACTTAGTGACTACATTCGTCTTATTGCTGCAGT TCAGAACTACTTAGTGACCACATTCGTCTTATTGCTGCAGT < 41bp 1 0.0519121622772961 1 0.106340914964676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122154694 chr5:122154692 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_19521 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:122154666-122154702
64251 chr1 28600553 28600553 1 + G A COAD 28600565 + 28600545 28600585 41 CCTCAGCTGACATCCTGGAGCCCTCTCCACACCCAGACATG CCTCAGCTAACATCCTGGAGCCCTCTCCACACCCAGACATG < 41bp 1 0.018457690670957 1 0.0191808342933655 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28600565 chr1:28600553 nonsynonymous SNV 0.252 3 9 hm5C_associated_SNPs_19523 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:28600551-28600584
64251 chr3 184021823 184021823 1 + T C COAD 184021833 + 184021813 184021853 41 GACTATGTTCTCCACAACAGCAACACCATGAGACTTGGTTC GACTATGTTCCCCACAACAGCAACACCATGAGACTTGGTTC < 41bp 1 0.565992419263414 1 0.329997926950455 experiment 0.868015161473171 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021833 chr3:184021823 nonsynonymous SNV 0.999 2 11 hm5C_associated_SNPs_19525 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184021729-184021827
64251 chr11 74336521 74336521 1 + G A COAD 74336519 + 74336499 74336539 41 AAAAATAGTGGAGCAGCCTACAGTGTCTGTCACGGAACCAA AAAAATAGTGGAGCAGCCTACAATGTCTGTCACGGAACCAA < 41bp 1 0.336743400553412 1 0.371417939662933 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD3 ENSG00000077514 CDS Human protein_coding chr11:74336519 chr11:74336521 nonsynonymous SNV 0.993 0 23 hm5C_associated_SNPs_19526 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74336498-74336527
64251 chr21 44450175 44450175 1 + C T COAD 44450169 + 44450149 44450189 41 GGTGCCCTGGCCCCTGCCCACATCAGCGGGCTGGTCTTGGA GGTGCCCTGGCCCCTGCCCACATCAGTGGGCTGGTCTTGGA < 41bp 1 0.790839374394396 1 0.0818377137184143 experiment 0.418321251211208 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44450169 chr21:44450175 synonymous SNV . 0 27 hm5C_associated_SNPs_19529 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr21:44450143-44450191
64251 chr17 7417427 7417427 1 + G A COAD 7417430 + 7417410 7417450 41 ACTTCCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTCT ACTTCCCCTGGTTACTCACCCACCAGCCCCACCTACAGTCT < 41bp 1 0.677865436425442 1 0.44840407371521 experiment 0.644269127149117 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7417430 chr17:7417427 synonymous SNV 0.990 0 18 hm5C_associated_SNPs_19530 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7417401-7417439
64251 chr19 7620147 7620147 1 + G A COAD 7620146 + 7620126 7620166 41 CCATCCCAGCATGAGCTCTACGAGAAGGTTTTCTCCAGGCG CCATCCCAGCATGAGCTCTACAAGAAGGTTTTCTCCAGGCG < 41bp 1 0.620878534250833 1 0.186141908168793 experiment 0.758242931498334 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620146 chr19:7620147 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_19532 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7620140-7620160
64251 chr19 7620147 7620147 1 + G A COAD 7620161 + 7620141 7620181 41 CTCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGCACAG CTCTACAAGAAGGTTTTCTCCAGGCGCGCGGACCGGCACAG < 41bp 1 0.666009424772872 1 0.919839859008789 experiment 0.667981150454255 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620161 chr19:7620147 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_19533 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7620140-7620160
64251 chr8 27288488 27288488 1 + C T COAD 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CTGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA < 41bp 1 0.713710530075467 1 0.973294496536255 experiment 0.572578939849066 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288488 synonymous SNV . 0 2 hm5C_associated_SNPs_19534 0 0 2 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr16 31235536 31235536 1 + G A COAD 31235556 + 31235536 31235576 41 GCACCCGAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG ACACCCGAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG < 41bp 1 0.267835510398057 1 0.0841374695301056 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235556 chr16:31235536 synonymous SNV . 0 1 hm5C_associated_SNPs_19537 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31235513-31235568
64251 chr8 25149615 25149615 1 + T C COAD 25149611 + 25149591 25149631 41 ATCGAGTGGCGGTCCCAGATCCTGTCTGGGACGCTCCCCAA ATCGAGTGGCGGTCCCAGATCCTGCCTGGGACGCTCCCCAA < 41bp 1 0.295095754733313 1 0.747626721858978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25149611 chr8:25149615 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_19538 0 0 2 EIF3H POSTAR2 ENCODE chr8:25149615-25149658
64251 chr19 54649749 54649749 1 + C G COAD 54649752 + 54649732 54649772 41 ACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTG ACCACCTCCAGCTCTCCGATCCCGCCCAGCCCAGCCAACTG < 41bp 1 0.224372476698649 1 0.487461417913437 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54649752 chr19:54649749 synonymous SNV . 0 18 hm5C_associated_SNPs_19541 0 0 2 GRWD1 POSTAR2 ENCODE chr19:54649712-54649758
64251 chrX 73047072 73047072 1 - C T COAD 73047076 - 73047056 73047096 41 CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA CCTGCCTGATAGGTGCAGAACGTCAGCTATCAGAGCAAGCA < 41bp 1 0.377831448917424 1 0.135126084089279 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047076 chrX:73047072 . . 0 25 hm5C_associated_SNPs_19553 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chr10 60580160 60580160 1 + A C COAD 60580149 + 60580129 60580169 41 ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT ATCGATCTTCAGACATTCCTCACTCTCACAGCTCAGGATCT < 41bp 1 0.0907959278675374 1 0.108972370624542 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60580149 chr10:60580160 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_19554 0 0 6 HNRNPD POSTAR2 GSE52971,GSM1279667 chr10:60580120-60580200
64251 chr7 98497050 98497050 1 + C T COAD 98497067 + 98497047 98497087 41 TTCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTGTTGG TTCTATCATTCCGAGGGGATCACTTTCTCTGAAAGTGTTGG < 41bp 1 0.0322564768069464 1 0.0962260961532593 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98497067 chr7:98497050 synonymous SNV . 0 4 hm5C_associated_SNPs_19571 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98497024-98497062
64251 chr16 56792463 56792463 1 + G A COAD 56792462 + 56792442 56792482 41 TCACATAGGTCAGTTCTCCTCGGGTCTCGGGGACTTGACAT TCACATAGGTCAGTTCTCCTCAGGTCTCGGGGACTTGACAT < 41bp 1 0.74063378281269 1 0.908152341842651 experiment 0.518732434374619 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56792462 chr16:56792463 nonsynonymous SNV 0.319 2 22 hm5C_associated_SNPs_19572 0 0 2 DDX3X POSTAR2 ENCODE chr16:56792435-56792568
64251 chr1 24998042 24998042 1 + A G COAD 24998049 + 24998029 24998069 41 AGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAG AGCTGCCACAACCGCATTAGCACAGGAAGAGCCAGTGGCAG < 41bp 1 0.742776252906757 1 0.207940578460693 experiment 0.514447494186486 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24998049 chr1:24998042 nonsynonymous SNV 0.740 1 14 hm5C_associated_SNPs_19573 0 0 1 TRA2A POSTAR2 ENCODE chr1:24998038-24998078
64251 chr16 89977042 89977042 1 + C T COAD 89977054 + 89977034 89977074 41 TCTTCTTCCGGTCACTGTTGCCAAACTATACCATGGAGGTA TCTTCTTCTGGTCACTGTTGCCAAACTATACCATGGAGGTA < 41bp 1 0.289787691662862 1 0.296983063220978 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89977054 chr16:89977042 nonsynonymous SNV 0.037 4 9 hm5C_associated_SNPs_19574 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:89977010-89977045
64251 chr1 876651 876651 1 + C T COAD 876631 + 876611 876651 41 GTCAGCGTCGGAAGCAGGGCCTGGCTCAGCACCGGGAGGGC GTCAGCGTCGGAAGCAGGGCCTGGCTCAGCACCGGGAGGGT < 41bp 1 0.672078389769791 1 0.383477687835693 experiment 0.655843220460419 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:876631 chr1:876651 synonymous SNV 0.016 0 41 hm5C_associated_SNPs_19575 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:876621-876667
64251 chr2 219676971 219676971 1 + G A COAD 219676979 + 219676959 219676999 41 GGTACCAGCTGCGCCAGGCTCTGAACCAGCGGTTGCTGAAG GGTACCAGCTGCACCAGGCTCTGAACCAGCGGTTGCTGAAG < 41bp 1 0.737409704665498 1 0.784596562385559 experiment 0.525180590669005 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219676979 chr2:219676971 nonsynonymous SNV 0.998 5 13 hm5C_associated_SNPs_19576 0 0 3 GRWD1 POSTAR2 ENCODE chr2:219676943-219677001
64251 chr7 5643530 5643530 1 + G A COAD 5643510 + 5643490 5643530 41 ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCA < 41bp 1 0.340432332440768 1 0.0629790127277374 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643510 chr7:5643530 nonsynonymous SNV 0.963 2 41 hm5C_associated_SNPs_19577 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr7:5643520-5643541
64251 chr19 50334614 50334614 1 + G A COAD 50334624 + 50334604 50334644 41 CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAG CCCAGGAGGGATGAGCGGCCCTTCCCCAGCCCAGCTGGGAG < 41bp 1 0.215421508687646 1 0.199333250522614 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334624 chr19:50334614 nonsynonymous SNV 0.827 2 11 hm5C_associated_SNPs_19578 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50334591-50334618
64251 chr19 50334614 50334614 1 + G A COAD 50334629 + 50334609 50334649 41 GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA GAGGGATGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA < 41bp 1 0.465728620492691 1 0.243229418992996 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334629 chr19:50334614 nonsynonymous SNV 0.827 2 6 hm5C_associated_SNPs_19579 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50334591-50334618
64251 chr17 37676239 37676239 1 + C A COAD 37676240 + 37676220 37676260 41 CAGCACTTGATTTATTGGACCACATGCTGACACTAGATCCT CAGCACTTGATTTATTGGAACACATGCTGACACTAGATCCT < 41bp 1 0.132179445116993 1 0.0449666380882263 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676240 chr17:37676239 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_19580 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37676212-37676254
64251 chr13 20233194 20233194 1 + G A COAD 20233203 + 20233183 20233223 41 GGATGAAGTTGGAAGATTTCCAAAAGCACCTTGATGGGAAA GGATGAAGTTGAAAGATTTCCAAAAGCACCTTGATGGGAAA < 41bp 1 0.692814751475586 1 0.802286326885223 experiment 0.614370497048828 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20233203 chr13:20233194 nonsynonymous SNV 0.760 4 12 hm5C_associated_SNPs_19581 0 0 2 UCHL5 POSTAR2 ENCODE chr13:20233156-20233205
64251 chr19 50912138 50912138 1 + C T COAD 50912125 + 50912105 50912145 41 CCACAACCTGTGTTACACCACGCTCCTTCGGCCCGGGACTG CCACAACCTGTGTTACACCACGCTCCTTCGGCCTGGGACTG < 41bp 1 0.180685071619708 1 0.0387570858001709 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912125 chr19:50912138 synonymous SNV . 0 34 hm5C_associated_SNPs_19582 2 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50912116-50912143
64251 chr8 54793589 54793589 1 + A G COAD 54793600 + 54793580 54793620 41 GCACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCG GCACGGCGGGCGGAGGCGAGCCGGCCGGGGCTTCCTCCCCG < 41bp 1 0.728863680606878 1 0.501587867736816 experiment 0.542272638786244 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RGS20 ENSG00000147509 CDS Human protein_coding chr8:54793600 chr8:54793589 nonsynonymous SNV 0.437 0 10 hm5C_associated_SNPs_19583 0 0 1 TIA1 POSTAR2 ENCODE chr8:54793565-54793601
64251 chr1 179851769 179851769 1 + G A COAD 179851757 + 179851737 179851777 41 CCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGTACAGAAC CCTCAAAATGGCGGCAGCAGCGATGCGCCTGCATACAGAAC < 41bp 1 0.65032283294265 1 0.26691722869873 experiment 0.6993543341147 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179851757 chr1:179851769 synonymous SNV . 0 33 hm5C_associated_SNPs_19584 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:179851761-179851793
64251 chr6 3015773 3015773 1 + T C COAD 3015789 + 3015769 3015809 41 GCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA GCTGCACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA < 41bp 1 0.425548224657342 1 0.0793637335300446 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015789 chr6:3015773 nonsynonymous SNV 0.836 2 5 hm5C_associated_SNPs_19589 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr13 52604966 52604966 1 + G A COAD 52604967 + 52604947 52604987 41 TGAGAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAG TGAGAAGCGCAACATCCACACAGCAGCTCATCAGGTACAAG < 41bp 1 0.618266837249492 1 0.190110385417938 experiment 0.763466325501015 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604967 chr13:52604966 nonsynonymous SNV 0.401 0 20 hm5C_associated_SNPs_19590 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr13 52604966 52604966 1 + G A COAD 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGCGCAACATCCACACAGCAGCTCATCAGGTACAAGTGC < 41bp 1 0.179814070802428 1 0.0729733407497406 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604966 nonsynonymous SNV 0.401 0 17 hm5C_associated_SNPs_19591 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr1 116916048 116916048 1 + C T COAD 116916028 + 116916008 116916048 41 CGCGGCAGCCCTAGCTCCCTCCACTTGGCTCCCCTGGTCCC CGCGGCAGCCCTAGCTCCCTCCACTTGGCTCCCCTGGTCCT < 41bp 1 0.354126727225705 1 0.187892109155655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP1A1 ENSG00000269279 CDS Human other chr1:116916028 chr1:116916048 nonsynonymous SNV . 0 41 hm5C_associated_SNPs_19592 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:116915900-116916120
64251 chr3 184039155 184039155 1 + G A COAD 184039162 + 184039142 184039182 41 CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCA CCCAGCCTTCGTCACCTTCTCCGACCCCATCACCATCCCCA < 41bp 1 0.217690658633294 1 0.359680593013763 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039162 chr3:184039155 synonymous SNV . 0 14 hm5C_associated_SNPs_19594 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr3 184039155 184039155 1 + G A COAD 184039163 + 184039143 184039183 41 CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCAG CCAGCCTTCGTCACCTTCTCCGACCCCATCACCATCCCCAG < 41bp 1 0.320911734506678 1 0.776067495346069 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039163 chr3:184039155 synonymous SNV . 0 13 hm5C_associated_SNPs_19595 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr7 73609162 73609162 1 + C T COAD 73609171 + 73609151 73609191 41 TTCAGAGATGGCCCTCCCCTCCGTGGATCCAACATGGATTT TTCAGAGATGGTCCTCCCCTCCGTGGATCCAACATGGATTT < 41bp 1 0.477763253846125 1 0.167983710765839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609171 chr7:73609162 synonymous SNV . 0 12 hm5C_associated_SNPs_19596 0 0 19 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73609131-73609173
64251 chr17 4905829 4905829 1 + G A COAD 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTCTCTGCAGGTCCGGGAGCACCCCATCCTGGG < 41bp 1 0.565010607815559 1 0.609167039394379 experiment 0.869978784368882 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905829 nonsynonymous SNV 0.997 3 17 hm5C_associated_SNPs_19597 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4905814-4905838
64251 chr22 40661386 40661386 1 + T C COAD 40661395 + 40661375 40661415 41 TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGAAT TTGAACTTAAGCTCACCAAACCCCATGGAGAATAAGGGAAT < 41bp 1 0.165477289458209 1 0.159560263156891 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40661395 chr22:40661386 synonymous SNV . 0 12 hm5C_associated_SNPs_19598 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:40661361-40661393
64251 chr16 1550683 1550683 1 + C T COAD 1550684 + 1550664 1550704 41 CCGGATCCACCCCGAGGGGCCTCCCCTGAAATTCCAGGTGA CCGGATCCACCCCGAGGGGTCTCCCCTGAAATTCCAGGTGA < 41bp 1 0.39647881172278 1 0.114335954189301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550684 chr16:1550683 nonsynonymous SNV 0.811 1 20 hm5C_associated_SNPs_19599 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr8 145583765 145583765 1 + G A COAD 145583775 + 145583755 145583795 41 TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTC TGCCCTTCTGATCGCTTCAGCTGCTGCCTTCCAGGGTCTTC < 41bp 1 0.323659852494128 1 0.0655770599842072 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583775 chr8:145583765 nonsynonymous SNV 0.023 0 11 hm5C_associated_SNPs_19600 0 0 1 DDX55 POSTAR2 ENCODE chr8:145583725-145583788
64251 chr17 79652704 79652704 1 + G A COAD 79652714 + 79652694 79652734 41 GACCTGATCCGCCAAGGGGACACACAGTGAGTTAGCGGGGC GACCTGATCCACCAAGGGGACACACAGTGAGTTAGCGGGGC < 41bp 1 0.193782508111973 1 0.239881336688995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79652714 chr17:79652704 nonsynonymous SNV 0.991 4 11 hm5C_associated_SNPs_19601 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:79652658-79652715
64251 chr2 204082014 204082014 1 + G A COAD 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCGAAAATTTTGGGGATCAAGCAAGCGGCTCAGCCAGA < 41bp 1 0.187456975769036 1 0.258446902036667 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204082014 synonymous SNV . 0 22 hm5C_associated_SNPs_19602 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr10 104129689 104129689 1 + G A COAD 104129695 + 104129675 104129715 41 GTCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCA GTCTAGTGTTCGGGACCCATCCACTGAAAACCAAGAGGCCA < 41bp 1 0.205252475258337 1 0.718380928039551 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129695 chr10:104129689 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_19604 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr10 104129689 104129689 1 + G A COAD 104129696 + 104129676 104129716 41 TCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCAA TCTAGTGTTCGGGACCCATCCACTGAAAACCAAGAGGCCAA < 41bp 1 0.481895324469914 1 0.597578287124634 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129696 chr10:104129689 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_19605 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr1 978673 978673 1 + C T COAD 978683 + 978663 978703 41 GCGACGTGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG GCGACGTGTGTTGTGAAGAACGGGCAGGCAGCGTGTGAATG < 41bp 1 0.375902035402266 1 0.150994628667831 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:978683 chr1:978673 nonsynonymous SNV 0.064 0 11 hm5C_associated_SNPs_19606 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:978660-978680
64251 chr21 46931095 46931095 1 + G A COAD 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCGGGGCACACATCTTCTCCTTTGACGGCAAGGACGTCC < 41bp 1 0.0414166683253917 1 0.0856748521327972 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931095 nonsynonymous SNV 0.536 4 12 hm5C_associated_SNPs_19607 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr21 46931095 46931095 1 + G A COAD 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCGGGGCACACATCTTCTCCTTTGACGGCAAGGACGTCCT < 41bp 1 0.0654541759238277 1 0.0712566673755646 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931095 nonsynonymous SNV 0.536 4 11 hm5C_associated_SNPs_19608 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr17 37359320 37359320 1 + T A COAD 37359313 + 37359293 37359333 41 TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATAC TGAGGAGAATGAGGATTTTGCGCCGGCAGCTCAGAAGATAC < 41bp 1 0.796521538468777 1 0.0837273001670837 experiment 0.406956923062445 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359313 chr17:37359320 nonsynonymous SNV 0.441 4 28 hm5C_associated_SNPs_19609 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359320 37359320 1 + T A COAD 37359316 + 37359296 37359336 41 GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGT GGAGAATGAGGATTTTGCGCCGGCAGCTCAGAAGATACCGT < 41bp 1 0.703463354592221 1 0.469786167144775 experiment 0.593073290815558 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359316 chr17:37359320 nonsynonymous SNV 0.441 4 25 hm5C_associated_SNPs_19610 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359320 37359320 1 + T A COAD 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGCGCCGGCAGCTCAGAAGATACCGTGAA < 41bp 1 0.384482990394726 1 0.235493212938309 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359320 nonsynonymous SNV 0.441 4 22 hm5C_associated_SNPs_19611 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359320 37359320 1 + T A COAD 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGCGCCGGCAGCTCAGAAGATACCGTGAATCT < 41bp 1 0.511754031034775 1 0.174792647361755 experiment 0.97649193793045 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359320 nonsynonymous SNV 0.441 4 19 hm5C_associated_SNPs_19612 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359320 37359320 1 + T A COAD 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCAGCTCAGAAGATACCGTGAATCTAAGAAGATCGA < 41bp 1 0.217247126552062 1 0.228010207414627 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359320 nonsynonymous SNV 0.441 4 8 hm5C_associated_SNPs_19613 0 0 55 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr11 66136050 66136050 1 - C T COAD 66136059 - 66136039 66136079 41 GCACCCTCTTCCTCAGCGGCCAGGGCCTGGCTGGGATCTTT GCACCCTCTTCCTCAGCGGCCAGGGCCTGACTGGGATCTTT < 41bp 1 0.481751817726002 1 0.728572010993958 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC29A2 ENSG00000174669 CDS Human protein_coding chr11:66136059 chr11:66136050 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_19614 0 0 1 METAP2 POSTAR2 ENCODE chr11:66136007-66136067
64251 chr1 11080584 11080584 1 + C T COAD 11080572 + 11080552 11080592 41 GAGGATGAGCTGCGGGAGTTCTTCTCTCAGTACGGGGATGT GAGGATGAGCTGCGGGAGTTCTTCTCTCAGTATGGGGATGT < 41bp 1 0.519509063874428 1 0.0350258946418762 experiment 0.960981872251144 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TARDBP ENSG00000120948 CDS Human protein_coding chr1:11080572 chr1:11080584 synonymous SNV . 0 33 hm5C_associated_SNPs_19615 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11080483-11080617
64251 chr17 17697546 17697546 1 + G A COAD 17697528 + 17697508 17697548 41 CCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCGGA CCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCAGA < 41bp 1 0.115479547052977 1 0.046071469783783 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697528 chr17:17697546 synonymous SNV . 0 39 hm5C_associated_SNPs_19616 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697534-17697554
64251 chr6 158449875 158449875 1 + C G COAD 158449888 + 158449868 158449908 41 ATCACTGCCACTGACTTTTACCCTCTTCAGGAAGAGGCCAA ATCACTGGCACTGACTTTTACCCTCTTCAGGAAGAGGCCAA < 41bp 1 0.0628654771223201 1 0.0402891337871552 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158449888 chr6:158449875 nonsynonymous SNV 0.201 0 8 hm5C_associated_SNPs_19617 0 0 3 DDX3X POSTAR2 ENCODE chr6:158449873-158449928
64251 chr20 37168565 37168565 1 + C T COAD 37168578 + 37168558 37168598 41 TCTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGATGAA TCTGTGTTTGGCTGACAGAGCACCCTGATATGCTTGATGAA < 41bp 1 0.18664559492365 1 0.131997883319855 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37168578 chr20:37168565 synonymous SNV . 0 8 hm5C_associated_SNPs_19618 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr20:37168557-37168582
64251 chrX 128691347 128691347 1 + G A COAD 128691345 + 128691325 128691365 41 GGGGACTGGATCAGAGAGCGCCGCTTTGAAATCCCTGATGA GGGGACTGGATCAGAGAGCGCCACTTTGAAATCCCTGATGA < 41bp 1 0.240446099859204 1 0.0455695986747742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128691345 chrX:128691347 nonsynonymous SNV 0.807 1 23 hm5C_associated_SNPs_19619 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:128691311-128691348
64251 chr12 58001373 58001373 1 + G A COAD 58001367 + 58001347 58001387 41 AGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGT AGTACGGCACCATTGTCATCCAGTACATCTTCCCGCCCGGT < 41bp 1 0.473634195453247 1 0.734605014324188 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001367 chr12:58001373 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_19620 0 0 1 GRWD1 POSTAR2 ENCODE chr12:58001354-58001396
64251 chr19 50912085 50912085 1 + T C COAD 50912092 + 50912072 50912112 41 CTTCTCCTCGCTGTACCCGTCCATCATGATGGCCCACAACC CTTCTCCTCGCTGCACCCGTCCATCATGATGGCCCACAACC < 41bp 1 0.0240249045342005 1 0.0375967621803284 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912092 chr19:50912085 nonsynonymous SNV 0.991 4 14 hm5C_associated_SNPs_19621 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50912040-50912120
64251 chr19 14020737 14020737 1 + C T COAD 14020742 + 14020722 14020762 41 GGCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCA GGCTTTGGTCGGGGGTCAGCCCCCAGCCCTGGAGAAGCTCA < 41bp 1 0.44775625830122 1 0.747197449207306 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020742 chr19:14020737 synonymous SNV . 0 16 hm5C_associated_SNPs_19622 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020737 14020737 1 + C T COAD 14020743 + 14020723 14020763 41 GCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAA GCTTTGGTCGGGGGTCAGCCCCCAGCCCTGGAGAAGCTCAA < 41bp 1 0.263359571079005 1 0.509347498416901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020743 chr19:14020737 synonymous SNV . 0 15 hm5C_associated_SNPs_19623 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020737 14020737 1 + C T COAD 14020744 + 14020724 14020764 41 CTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAA CTTTGGTCGGGGGTCAGCCCCCAGCCCTGGAGAAGCTCAAA < 41bp 1 0.131976777530847 1 0.410099476575851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020744 chr19:14020737 synonymous SNV . 0 14 hm5C_associated_SNPs_19624 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020737 14020737 1 + C T COAD 14020745 + 14020725 14020765 41 TTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAAG TTTGGTCGGGGGTCAGCCCCCAGCCCTGGAGAAGCTCAAAG < 41bp 1 0.446048095780597 1 0.43679141998291 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020745 chr19:14020737 synonymous SNV . 0 13 hm5C_associated_SNPs_19625 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr14 90867640 90867640 1 + C T COAD 90867648 + 90867628 90867668 41 TGATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTG TGATAAAGATGGTGATGGCACCATCACAACAAAGGAACTTG < 41bp 1 0.0675624595270005 1 0.0989518761634827 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867648 chr14:90867640 synonymous SNV . 0 13 hm5C_associated_SNPs_19626 1 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr14 90867640 90867640 1 + C T COAD 90867649 + 90867629 90867669 41 GATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTGG GATAAAGATGGTGATGGCACCATCACAACAAAGGAACTTGG < 41bp 1 0.436883489435176 1 0.382104426622391 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867649 chr14:90867640 synonymous SNV . 0 12 hm5C_associated_SNPs_19627 1 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr12 6646155 6646155 1 + C G COAD 6646142 + 6646122 6646162 41 CGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCA CGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTGACCACCA < 41bp 1 0.446230483050657 1 0.161671191453934 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646142 chr12:6646155 nonsynonymous SNV 0.998 2 34 hm5C_associated_SNPs_19628 0 0 16 FUS POSTAR2 DRA001158,DRS012384 chr12:6646091-6646167
64251 chr7 155532689 155532689 1 + T C COAD 155532698 + 155532678 155532718 41 CAGCAGCCGGATGCAGTGCCCCCAGCGCCAGGGGCTCCGGC CAGCAGCCGGACGCAGTGCCCCCAGCGCCAGGGGCTCCGGC < 41bp 1 0.314229905178768 1 0.340981900691986 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM33 ENSG00000184863 CDS Human protein_coding chr7:155532698 chr7:155532689 nonsynonymous SNV 0.975 1 12 hm5C_associated_SNPs_19629 0 0 1 UCHL5 POSTAR2 ENCODE chr7:155532624-155532705
64251 chr16 2569578 2569578 1 + C T COAD 2569563 + 2569543 2569583 41 AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAG AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGTCTGAG < 41bp 1 0.393471155578327 1 0.664148271083832 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569563 chr16:2569578 synonymous SNV . 0 36 hm5C_associated_SNPs_19630 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2569554-2569580
64251 chr9 137021693 137021693 1 + A T COAD 137021694 + 137021674 137021714 41 TTCAGACGAAAGAGATTGTACAGAAACTACAAGGCCACACA TTCAGACGAAAGAGATTGTTCAGAAACTACAAGGCCACACA < 41bp 1 0.704262062018088 1 0.582120299339294 experiment 0.591475875963824 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR5 ENSG00000196363 CDS Human protein_coding chr9:137021694 chr9:137021693 synonymous SNV . 0 20 hm5C_associated_SNPs_19631 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:137021646-137021708
64251 chr5 71648502 71648502 1 + A G COAD 71648516 + 71648496 71648536 41 TGGAAAACCTGATAAAGACTCTAAAAAATGCTGCAGAAGGA TGGAAAGCCTGATAAAGACTCTAAAAAATGCTGCAGAAGGA < 41bp 1 0.418146270790024 1 0.562787592411041 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71648516 chr5:71648502 nonsynonymous SNV 0.068 0 7 hm5C_associated_SNPs_19632 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:71648500-71648520
64251 chr3 196533536 196533536 1 + G A COAD 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCCGTTATTGCCCCACGACCGGATCATACGAA < 41bp 1 0.255238956746157 1 0.643704414367676 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533536 synonymous SNV . 0 24 hm5C_associated_SNPs_19633 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:196533507-196533538
64251 chr15 63340901 63340901 1 + G A COAD 63340906 + 63340886 63340926 41 GAGAGGAAGCTGAGGGAGACCGTAAGGGATACACCCATCAC GAGAGGAAGCTGAGGAAGACCGTAAGGGATACACCCATCAC < 41bp 1 0.739262810167497 1 0.29947766661644 experiment 0.521474379665007 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63340906 chr15:63340901 nonsynonymous SNV 1.000 0 16 hm5C_associated_SNPs_19634 0 0 4 GRWD1 POSTAR2 ENCODE chr15:63340823-63340907
64251 chr16 67662324 67662324 1 + G A COAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCGGGGAGAAGCCTTACACCTGCAGCCACTGCG < 41bp 1 0.195000676358301 1 0.161229699850082 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662324 nonsynonymous SNV 0.991 1 26 hm5C_associated_SNPs_19635 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr22 22040820 22040820 1 + A C COAD 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACCTCCACCGCGCTGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.291396219125371 1 0.197975695133209 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040820 nonsynonymous SNV 0.030 2 16 hm5C_associated_SNPs_19636 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr22 42273334 42273334 1 + C T COAD 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTCCTTTAACCCTCTGACTTCCCTGCTGCAG < 41bp 1 0.0926865451922525 1 0.0191623270511627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273334 synonymous SNV . 0 23 hm5C_associated_SNPs_19637 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:42273302-42273335
64251 chr3 25542773 25542773 1 + G A COAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGCCAATACTATCGACTCCAGAAGTGCTT < 41bp 1 0.172839097671543 1 0.0728573501110077 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542773 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_19638 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:25542765-25542798
64251 chr15 63354448 63354448 1 + T A COAD 63354456 + 63354436 63354476 41 ATGAGGAAGAGATCAAGGTCCTTTCCGACAAGCTGAAGGAG ATGAGGAAGAGAACAAGGTCCTTTCCGACAAGCTGAAGGAG < 41bp 1 0.0577551336996088 1 0.152798503637314 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63354456 chr15:63354448 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_19639 0 0 10 GRWD1 POSTAR2 ENCODE chr15:63354409-63354449
64251 chr16 3707246 3707246 1 + G T COAD 3707253 + 3707233 3707273 41 AGACCCTCCCAGTGGTCATCCATCCGCCTGTGGACAAGCCC AGACCCTCCCAGTTGTCATCCATCCGCCTGTGGACAAGCCC < 41bp 1 0.120747560402106 1 0.0894695818424225 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707253 chr16:3707246 nonsynonymous SNV 0.824 4 14 hm5C_associated_SNPs_19640 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:3707225-3707258
64251 chr1 166819257 166819257 1 + G A COAD 166819242 + 166819222 166819262 41 TCTTGAATGGCTTCCGGGGCCATGCCACAGATTCCGTGAAG TCTTGAATGGCTTCCGGGGCCATGCCACAGATTCCATGAAG < 41bp 1 0.234286665714575 1 0.138997554779053 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166819242 chr1:166819257 nonsynonymous SNV 0.946 4 36 hm5C_associated_SNPs_19641 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:166819220-166819260
64251 chr7 44806152 44806152 1 + G T COAD 44806140 + 44806120 44806160 41 CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCG CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGTGCCAAGCG < 41bp 1 0.646495572301199 1 0.444151878356934 experiment 0.707008855397602 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806140 chr7:44806152 nonsynonymous SNV 0.990 4 33 hm5C_associated_SNPs_19642 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44806112-44806158
64251 chr16 1550689 1550689 1 + C T COAD 1550684 + 1550664 1550704 41 CCGGATCCACCCCGAGGGGCCTCCCCTGAAATTCCAGGTGA CCGGATCCACCCCGAGGGGCCTCCCTTGAAATTCCAGGTGA < 41bp 1 0.39544521613925 1 0.0794975757598877 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550684 chr16:1550689 synonymous SNV . 0 26 hm5C_associated_SNPs_19643 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr8 48641569 48641569 1 + T A COAD 48641587 + 48641567 48641607 41 CCTGGACTGCCGCTCAAGACCGCAGTGCAGAGTGAAGGTCA CCAGGACTGCCGCTCAAGACCGCAGTGCAGAGTGAAGGTCA < 41bp 1 0.645022369571168 1 0.218952864408493 experiment 0.709955260857664 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPIDR ENSG00000164808 CDS Human protein_coding chr8:48641587 chr8:48641569 nonsynonymous SNV 0.989 4 3 hm5C_associated_SNPs_19644 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr8:48641541-48641575
64251 chrX 129149437 129149437 1 + C T COAD 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAACCACGGCCTGGGGGCTCCTTCGTTTCAGAGCAGGACC < 41bp 1 0.026043755768684 1 0.207943856716156 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149437 nonsynonymous SNV 0.997 0 29 hm5C_associated_SNPs_19645 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149410-129149438
64251 chr19 42406708 42406708 1 + T A COAD 42406702 + 42406682 42406722 41 GTTTGATGGTGCTGAGGGCTCCTGGTTCCAGAAAATCTCCT GTTTGATGGTGCTGAGGGCTCCTGGTACCAGAAAATCTCCT < 41bp 1 0.258006022239778 1 0.351497828960419 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42406702 chr19:42406708 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_19646 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42406701-42406739
64251 chr17 694931 694931 1 + G C COAD 694913 + 694893 694933 41 CGGGTCTATGTGGCTGACAACTGTGGCCTTTATGCCCAGGC CGGGTCTATGTGGCTGACAACTGTGGCCTTTATGCCCACGC < 41bp 1 0.453189910319207 1 0.225541859865189 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRM3 ENSG00000171861 CDS Human protein_coding chr17:694913 chr17:694931 nonsynonymous SNV 0.167 1 39 hm5C_associated_SNPs_19648 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:694887-694931
64251 chr9 139244090 139244090 1 + G A COAD 139244104 + 139244084 139244124 41 AGCAGGGACTCGCTACCCCTCCCCGTGAGGAGCAGGAAGTA AGCAGGAACTCGCTACCCCTCCCCGTGAGGAGCAGGAAGTA < 41bp 1 0.368344880417664 1 0.430926203727722 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139244104 chr9:139244090 nonsynonymous SNV 0.942 1 7 hm5C_associated_SNPs_19649 0 0 1 DHX30 POSTAR2 ENCODE chr9:139244024-139244091
64251 chr1 150280539 150280539 1 + G A COAD 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAACCATGCCGCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.675265837227999 1 0.64592981338501 experiment 0.649468325544002 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280539 synonymous SNV . 0 11 hm5C_associated_SNPs_19650 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:150280480-150280540
64251 chr22 38013057 38013057 1 + G A COAD 38013067 + 38013047 38013087 41 GACACCAAGGGAGGCCAAGACTGAGGTTCTTGGGGTCCATA GACACCAAGGAAGGCCAAGACTGAGGTTCTTGGGGTCCATA < 41bp 1 0.418107784991085 1 0.053632527589798 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GGA1 ENSG00000100083;ENSG00000100083 exonic;splicing Human other chr22:38013067 chr22:38013057 nonsynonymous SNV 0.344 0 11 hm5C_associated_SNPs_19651 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38013038-38013064
64251 chr22 42273331 42273331 1 + C T COAD 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTCCTTTAATCCCCTGACTTCCCTGCTGCAG < 41bp 1 0.303825408462937 1 0.0500078201293945 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273331 synonymous SNV . 0 20 hm5C_associated_SNPs_19653 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:42273289-42273332
64251 chr11 46396322 46396322 1 + G A COAD 46396330 + 46396310 46396350 41 CTCCAGTGTGATGGAATGGACTTGACTCCCAAGATCCAGGA CTCCAGTGTGATAGAATGGACTTGACTCCCAAGATCCAGGA < 41bp 1 0.381468264404203 1 0.0507414042949677 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46396330 chr11:46396322 nonsynonymous SNV 0.946 4 13 hm5C_associated_SNPs_19654 0 0 2 BUD13 POSTAR2 ENCODE chr11:46396272-46396337
64251 chr12 57597296 57597296 1 + G A COAD 57597276 + 57597256 57597296 41 GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGG GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGA < 41bp 1 0.204167693565062 1 0.373159855604172 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57597276 chr12:57597296 nonsynonymous SNV 0.977 1 41 hm5C_associated_SNPs_19658 0 0 3 PPIG POSTAR2 ENCODE chr12:57597201-57597304
64251 chr6 31914178 31914178 1 + C T COAD 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCTCGGC < 41bp 1 0.692826648047639 1 0.983625531196594 experiment 0.614346703904721 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914178 synonymous SNV . 0 37 hm5C_associated_SNPs_19659 0 0 4 DDX3X POSTAR2 ENCODE chr6:31914165-31914220
64251 chr12 107254074 107254074 1 + T C COAD 107254054 + 107254034 107254074 41 CTGTTTTTGCAGTGGATAGTCTGCTGAAATACACTGGCTAT CTGTTTTTGCAGTGGATAGTCTGCTGAAATACACTGGCTAC < 41bp 1 0.677750755736086 1 0.608401894569397 experiment 0.644498488527827 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8B ENSG00000111785 CDS Human protein_coding chr12:107254054 chr12:107254074 synonymous SNV . 0 41 hm5C_associated_SNPs_19660 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:107254059-107254084
64251 chrX 48457292 48457292 1 + G T COAD 48457272 + 48457252 48457292 41 CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTG CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTT < 41bp 1 0.635745677463278 1 0.901914358139038 experiment 0.728508645073445 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457272 chrX:48457292 nonsynonymous SNV 0.998 1 41 hm5C_associated_SNPs_19661 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48457281-48457305
64251 chrX 48457292 48457292 1 + G T COAD 48457273 + 48457253 48457293 41 CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGC CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTTC < 41bp 1 0.641662078455246 1 0.722640573978424 experiment 0.716675843089507 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457273 chrX:48457292 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_19662 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48457281-48457305
64251 chr1 214819438 214819438 1 + T A COAD 214819453 + 214819433 214819473 41 ATTCTTGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT ATTCTAGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT < 41bp 1 0.289959108091506 1 0.677535891532898 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819453 chr1:214819438 synonymous SNV . 0 6 hm5C_associated_SNPs_19664 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819343-214819493
64251 chr10 70101358 70101358 1 + A G COAD 70101359 + 70101339 70101379 41 AAGAACATCGATATATTGAACTCTTCTTGAATTCTACTCCT AAGAACATCGATATATTGAGCTCTTCTTGAATTCTACTCCT < 41bp 1 0.272361517432439 1 0.0424448251724243 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70101359 chr10:70101358 synonymous SNV . 0 20 hm5C_associated_SNPs_19665 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:70101340-70101380
64251 chr3 51624522 51624522 1 + A T COAD 51624531 + 51624511 51624551 41 GGAGGAGGAGGAGGAGGTGGCAGTGGAGGAGTGTGACAGGG GGAGGAGGAGGTGGAGGTGGCAGTGGAGGAGTGTGACAGGG < 41bp 1 0.665447612606056 1 0.686289489269257 experiment 0.669104774787888 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624531 chr3:51624522 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_19666 0 0 5 BUD13 POSTAR2 ENCODE chr3:51624516-51624578
64251 chrX 129149427 129149427 1 + C T COAD 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAACCACGGCCTGGGGGTTCCTTCGTTCCAGAGCAGGACC < 41bp 1 0.0268619673115773 1 0.107416927814484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149427 synonymous SNV . 0 19 hm5C_associated_SNPs_19667 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129149409-129149434
64251 chr16 722937 722937 1 + A C COAD 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACCTGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC < 41bp 1 0.339544883786577 1 0.249110460281372 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722937 nonsynonymous SNV 0.951 1 7 hm5C_associated_SNPs_19668 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr8 41355101 41355101 1 + G A COAD 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGACCAGTCATATCTCGAAGGTTGT < 41bp 1 0.168173102639989 1 0.188007533550262 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355101 nonsynonymous SNV 0.968 1 19 hm5C_associated_SNPs_19670 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:41355065-41355101
64251 chr8 124146381 124146381 1 + G A COAD 124146369 + 124146349 124146389 41 CATAGGTATATATGAGAGATCGAGAAATTGCTGCCACAGCC CATAGGTATATATGAGAGATCGAGAAATTGCTACCACAGCC < 41bp 1 0.798241898340973 1 0.622787773609161 experiment 0.403516203318055 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124146369 chr8:124146381 nonsynonymous SNV 0.994 0 33 hm5C_associated_SNPs_19672 0 0 1 ZNF622 POSTAR2 ENCODE chr8:124146357-124146423
64251 chr12 131488796 131488796 1 + G A COAD 131488788 + 131488768 131488808 41 TTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA TTCCTCCCATTACCGCTTCCCGGCCCACAGGCAGAGCTTCA < 41bp 1 0.215391763513902 1 0.473623096942902 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488788 chr12:131488796 nonsynonymous SNV 0.024 4 29 hm5C_associated_SNPs_19674 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488796 131488796 1 + G A COAD 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTCCCATTACCGCTTCCCGGCCCACAGGCAGAGCTTCATCC < 41bp 1 0.0360613180033132 1 0.0239941775798798 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488796 nonsynonymous SNV 0.024 4 26 hm5C_associated_SNPs_19675 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488796 131488796 1 + G A COAD 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TCCCATTACCGCTTCCCGGCCCACAGGCAGAGCTTCATCCA < 41bp 1 0.317936962068999 1 0.133228093385696 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488796 nonsynonymous SNV 0.024 4 25 hm5C_associated_SNPs_19676 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488796 131488796 1 + G A COAD 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG CCCATTACCGCTTCCCGGCCCACAGGCAGAGCTTCATCCAG < 41bp 1 0.414246000474428 1 0.148070096969604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488796 nonsynonymous SNV 0.024 4 24 hm5C_associated_SNPs_19677 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488796 131488796 1 + G A COAD 131488795 + 131488775 131488815 41 CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGAT CATTACCGCTTCCCGGCCCACAGGCAGAGCTTCATCCAGAT < 41bp 1 0.46201417388814 1 0.795790791511536 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488795 chr12:131488796 nonsynonymous SNV 0.024 4 22 hm5C_associated_SNPs_19678 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488796 131488796 1 + G A COAD 131488799 + 131488779 131488819 41 ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCC ACCGCTTCCCGGCCCACAGGCAGAGCTTCATCCAGATCCCC < 41bp 1 0.425656439698631 1 0.680865883827209 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488799 chr12:131488796 nonsynonymous SNV 0.024 4 18 hm5C_associated_SNPs_19679 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr6 151671196 151671196 1 + G A COAD 151671207 + 151671187 151671227 41 CTCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC CTCCGGACAACCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC < 41bp 1 0.572692576430679 1 0.717722654342651 experiment 0.854614847138641 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671207 chr6:151671196 nonsynonymous SNV 0.038 4 10 hm5C_associated_SNPs_19680 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151671164-151671203
64251 chr19 579609 579609 1 + C T COAD 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG TGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG < 41bp 1 0.454694494364171 1 0.436221361160278 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579609 synonymous SNV . 0 1 hm5C_associated_SNPs_19681 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:579577-579619
64251 chr16 2079755 2079755 1 + G A COAD 2079750 + 2079730 2079770 41 CCGAAGCCAGACTGGGCACACACCGGCAGCCACAGCTCCGA CCGAAGCCAGACTGGGCACACACCGACAGCCACAGCTCCGA < 41bp 1 0.644030381207458 1 0.0919854342937469 experiment 0.711939237585083 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2079750 chr16:2079755 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_19682 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:2079755-2079756
64251 chr12 122079104 122079104 1 + T C COAD 122079102 + 122079082 122079122 41 AACATCGAGGCGGTGAGCAACGTGCACAATCTCAACTCGGT AACATCGAGGCGGTGAGCAACGCGCACAATCTCAACTCGGT < 41bp 1 0.346401316789952 1 0.277368903160095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ORAI1 ENSG00000182500 CDS Human other chr12:122079102 chr12:122079104 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_19683 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122079094-122079120
64251 chr12 57919747 57919747 1 + T C COAD 57919754 + 57919734 57919774 41 CCAAGGCACAGCATCCCCCACTACCCCCTCCCAGCACTTTA CCAAGGCACAGCACCCCCCACTACCCCCTCCCAGCACTTTA < 41bp 1 0.118225308960824 1 0.0383099317550659 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919754 chr12:57919747 synonymous SNV . 0 14 hm5C_associated_SNPs_19685 0 0 5 DDX59 POSTAR2 ENCODE chr12:57919683-57919768
64251 chr3 38180279 38180279 1 + C T COAD 38180284 + 38180264 38180304 41 CTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTCTTGAA CTCAACATGCGAGTGTGGCGCCGCCTGTCTCTGTTCTTGAA < 41bp 1 0.166931553327716 1 0.12940776348114 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180284 chr3:38180279 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_19686 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr3 184042675 184042675 1 + C T COAD 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAGGAATGAGGACGCCTGAAGGAAGAGCTGGAA < 41bp 1 0.476973377875804 1 0.582316100597382 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042675 stopgain 0.991 0 15 hm5C_associated_SNPs_19687 0 0 19 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr3 184042675 184042675 1 + C T COAD 184042684 + 184042664 184042704 41 AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG AGGCAGAGGAATGAGGACGCCTGAAGGAAGAGCTGGAAGAG < 41bp 1 0.760990278721218 1 0.68169766664505 experiment 0.478019442557564 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042684 chr3:184042675 stopgain 0.991 0 12 hm5C_associated_SNPs_19688 0 0 19 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr5 148808549 148808549 1 + A G COAD 148808551 + 148808531 148808571 41 GTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAG GTTGGGAGTCTGAGATGAGGCACTGTAGCTCAGGAAGAGAG < 41bp 1 0.463530891098651 1 0.144989401102066 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808551 chr5:148808549 . . 0 19 hm5C_associated_SNPs_19689 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr5 148808549 148808549 1 + A G COAD 148808553 + 148808533 148808573 41 TGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAA TGGGAGTCTGAGATGAGGCACTGTAGCTCAGGAAGAGAGAA < 41bp 1 0.347478486064196 1 0.0452137291431427 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808553 chr5:148808549 . . 0 17 hm5C_associated_SNPs_19690 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr5 148808549 148808549 1 + A G COAD 148808559 + 148808539 148808579 41 TCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTT TCTGAGATGAGGCACTGTAGCTCAGGAAGAGAGAAGTTGTT < 41bp 1 0.64502519192434 1 0.0480276346206665 experiment 0.709949616151319 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808559 chr5:148808549 . . 0 11 hm5C_associated_SNPs_19691 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr6 160481649 160481649 1 + G T COAD 160481661 + 160481641 160481681 41 AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCG AAATTCCTTCATCAAGATATCGACTCTGGGCAAGGGATCCG < 41bp 1 0.139230178086723 1 0.36960780620575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160481661 chr6:160481649 synonymous SNV . 0 9 hm5C_associated_SNPs_19694 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:160481618-160481664
64251 chr10 103291074 103291074 1 + T G COAD 103291084 + 103291064 103291104 41 TATCCTAAAATTATACAAGACATTGAGGTAAGAATCTATGT TATCCTAAAAGTATACAAGACATTGAGGTAAGAATCTATGT < 41bp 1 0.0594281935377365 1 0.0188096165657043 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BTRC ENSG00000166167 CDS Human protein_coding chr10:103291084 chr10:103291074 nonsynonymous SNV 0.999 4 11 hm5C_associated_SNPs_19696 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103291058-103291082
64251 chr20 2635158 2635158 1 + G A COAD 2635143 + 2635123 2635163 41 TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCCGCAATA TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCCACAATA < 41bp 1 0.55487594392449 1 0.196308076381683 experiment 0.89024811215102 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635143 chr20:2635158 nonsynonymous SNV 0.976 1 36 hm5C_associated_SNPs_19700 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr20 2635158 2635158 1 + G A COAD 2635157 + 2635137 2635177 41 GGGGATCCCAAGATTGGTGCCGCAATACAGGAGGAGTTAGG GGGGATCCCAAGATTGGTGCCACAATACAGGAGGAGTTAGG < 41bp 1 0.524511698274936 1 0.20717790722847 experiment 0.950976603450127 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635157 chr20:2635158 nonsynonymous SNV 0.976 1 22 hm5C_associated_SNPs_19701 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr2 162091890 162091890 1 + C T COAD 162091882 + 162091862 162091902 41 AAGCCCTTTCCTAATCAAGACAGTGACTCGGTGGTACTAAG AAGCCCTTTCCTAATCAAGACAGTGACTTGGTGGTACTAAG < 41bp 1 0.330987642685577 1 0.138175904750824 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TANK ENSG00000136560 CDS Human protein_coding chr2:162091882 chr2:162091890 nonsynonymous SNV 0.917 0 29 hm5C_associated_SNPs_19702 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:162091874-162091894
64251 chr3 184021822 184021822 1 + C A COAD 184021833 + 184021813 184021853 41 GACTATGTTCTCCACAACAGCAACACCATGAGACTTGGTTC GACTATGTTATCCACAACAGCAACACCATGAGACTTGGTTC < 41bp 1 0.537175838805881 1 0.368222445249557 experiment 0.925648322388238 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021833 chr3:184021822 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_19703 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184021729-184021827
64251 chr8 126034024 126034024 1 + G A COAD 126034007 + 126033987 126034027 41 TATTACAGATTGTCTCCTAACCCTCTAGTTTTAATTGGACA TATTACAGATTGTCTCCTAACCCTCTAGTTTTAATTGAACA < 41bp 1 0.0373449882646356 1 0.0474207699298859 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SQLE ENSG00000104549 CDS Human protein_coding chr8:126034007 chr8:126034024 nonsynonymous SNV 0.792 3 38 hm5C_associated_SNPs_19704 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr8:126034014-126034033
64251 chr10 43292259 43292259 1 + G T COAD 43292254 + 43292234 43292274 41 AGAAGGGGAAGCGGAGGAAGCTGATGAAAGCAGTGAAGAAG AGAAGGGGAAGCGGAGGAAGCTGATTAAAGCAGTGAAGAAG < 41bp 1 0.590573971674027 1 0.368337154388428 experiment 0.818852056651947 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292254 chr10:43292259 stopgain 0.989 1 26 hm5C_associated_SNPs_19705 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:43292240-43292260
64251 chr10 43292259 43292259 1 + G T COAD 43292264 + 43292244 43292284 41 GCGGAGGAAGCTGATGAAAGCAGTGAAGAAGAGGACTGCAC GCGGAGGAAGCTGATTAAAGCAGTGAAGAAGAGGACTGCAC < 41bp 1 0.607470163313252 1 0.475530862808228 experiment 0.785059673373496 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292264 chr10:43292259 stopgain 0.989 1 16 hm5C_associated_SNPs_19706 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr10:43292240-43292260
64251 chr1 23408772 23408772 1 + C A COAD 23408765 + 23408745 23408785 41 TGATCCCTGGGCTCGGGGCTCTTATTCCTATGTTGCTGCAG TGATCCCTGGGCTCGGGGCTCTTATTCATATGTTGCTGCAG < 41bp 1 0.127601448281764 1 0.14509305357933 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1A ENSG00000004487 CDS Human protein_coding chr1:23408765 chr1:23408772 synonymous SNV . 0 28 hm5C_associated_SNPs_19708 0 0 19 FMR1 POSTAR2 GSE39682,GSM977616 chr1:23408736-23408796
64251 chr17 685765 685765 1 + A G COAD 685745 + 685725 685765 41 GCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAA GCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAG < 41bp 1 0.0555706576339865 1 0.0654690563678741 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRM3 ENSG00000171861 CDS Human protein_coding chr17:685745 chr17:685765 synonymous SNV . 0 41 hm5C_associated_SNPs_19709 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:685754-685766
64251 chr3 52237955 52237955 1 + G T COAD 52237938 + 52237918 52237958 41 TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAAGAAC TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAATAAC < 41bp 1 0.360881847317076 1 0.0937609076499939 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52237938 chr3:52237955 nonsynonymous SNV 0.994 1 38 hm5C_associated_SNPs_19710 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:52237920-52237955
64251 chr20 32659984 32659984 1 + A C COAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT ACATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT < 41bp 1 0.204129702935565 1 0.0748936235904694 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32659984 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_19711 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chr2 27258560 27258560 1 + C A COAD 27258544 + 27258524 27258564 41 GCAGCAGGGTCTCTGGAGCTCTTTTTTGACCACTGTCTGTT GCAGCAGGGTCTCTGGAGCTCTTTTTTGACCACTGTATGTT < 41bp 1 0.12804429236674 1 0.0468843579292297 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258544 chr2:27258560 nonsynonymous SNV 0.994 0 37 hm5C_associated_SNPs_19712 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:27258540-27258560
64251 chr5 71499406 71499406 1 + G T COAD 71499412 + 71499392 71499432 41 CCAGGAACTACCAAGACGACCAAGTCATCTGCTGTGCCCCC CCAGGAACTACCAATACGACCAAGTCATCTGCTGTGCCCCC < 41bp 1 0.209231266140505 1 0.839129209518433 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71499412 chr5:71499406 nonsynonymous SNV 0.705 4 15 hm5C_associated_SNPs_19714 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:71499397-71499434
64251 chr1 154947236 154947236 1 + A C COAD 154947230 + 154947210 154947250 41 AACCGAGCGATCATGTCGCACAAACAAATTTACTATTCGGA AACCGAGCGATCATGTCGCACAAACACATTTACTATTCGGA < 41bp 1 0.0739223711454852 1 0.0730399787425995 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS1B ENSG00000173207 CDS Human protein_coding chr1:154947230 chr1:154947236 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_19716 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154947220-154947255
64251 chr9 79996924 79996924 1 + G A COAD 79996920 + 79996900 79996940 41 AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTC AGACTTCTGAAGTGGAGAGTCTGCAACCTCCTCGGTTCTTC < 41bp 1 0.558466004781052 1 0.654876947402954 experiment 0.883067990437896 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS13A ENSG00000197969 CDS Human protein_coding chr9:79996920 chr9:79996924 nonsynonymous SNV 0.985 4 25 hm5C_associated_SNPs_19728 0 0 2 EIF3H POSTAR2 ENCODE chr9:79996893-79996995
64251 chr16 53358283 53358283 1 + C A COAD 53358269 + 53358249 53358289 41 CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTGG CATGCTGCTGTCAGGAATGGCTGGATTACCAAATATGTTGG < 41bp 1 0.701724686290278 1 0.85181999206543 experiment 0.596550627419444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53358269 chr16:53358283 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_19729 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:53358272-53358295
64251 chr10 93756295 93756295 1 + T C COAD 93756310 + 93756290 93756330 41 CAGTGTCAAACAAGAGGGTGCAATTGAAGCACTTGCCTGTA CAGTGCCAAACAAGAGGGTGCAATTGAAGCACTTGCCTGTA < 41bp 1 0.110095085736136 1 0.0485715568065643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93756310 chr10:93756295 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_19730 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:93756245-93756296
64251 chr2 86360314 86360314 1 + G A COAD 86360303 + 86360283 86360323 41 TTTTTGCCTTCATCACAGTTCCAAGTTCTTCGATTTGATTT TTTTTGCCTTCATCACAGTTCCAAGTTCTTCAATTTGATTT < 41bp 1 0.0924328539573511 1 0.0436755418777466 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360303 chr2:86360314 nonsynonymous SNV 0.562 0 32 hm5C_associated_SNPs_19731 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:86360304-86360316
64251 chr8 104452462 104452462 1 + G A COAD 104452461 + 104452441 104452481 41 GATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAATGCT GATCTGATGAAATGAACATTCACCTGTGGAAAGCTAATGCT < 41bp 1 0.715294148581891 1 0.0759576261043549 experiment 0.569411702836218 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452461 chr8:104452462 nonsynonymous SNV 0.992 3 22 hm5C_associated_SNPs_19733 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104452376-104452483
64251 chr6 151258063 151258063 1 + G A COAD 151258052 + 151258032 151258072 41 CCTGCTTGAGGCAGCCTTCCCAAGGACCGACGTTTGGAGTG CCTGCTTGAGGCAGCCTTCCCAAGGACCGACATTTGGAGTG < 41bp 1 0.772355849791967 1 0.962890446186066 experiment 0.455288300416066 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151258052 chr6:151258063 synonymous SNV . 0 32 hm5C_associated_SNPs_19734 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:151258048-151258075
64251 chrX 215934 215934 1 + G A COAD 215918 + 215898 215938 41 GGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTT GGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGAACTT < 41bp 1 0.521086559313534 1 0.374004036188126 experiment 0.957826881372932 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:215918 chrX:215934 nonsynonymous SNV 0.128 4 37 hm5C_associated_SNPs_19735 0 0 2 GRWD1 POSTAR2 ENCODE chrX:215913-215953
64251 chr14 104618660 104618660 1 + C T COAD 104618666 + 104618646 104618686 41 CTGGCCTGGTCCCCCGGGCCCAGTGTCCAGGTGTCTGTAGC CTGGCCTGGTCCCCTGGGCCCAGTGTCCAGGTGTCTGTAGC < 41bp 1 0.207385788694649 1 0.0790555477142334 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104618666 chr14:104618660 synonymous SNV . 0 15 hm5C_associated_SNPs_19736 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:104618658-104618696
64251 chr12 51117091 51117091 1 + C A COAD 51117087 + 51117067 51117107 41 CCTCACGGCCACGCTGCCCACTGTCCGAATGATTGTTGATG CCTCACGGCCACGCTGCCCACTGTACGAATGATTGTTGATG < 41bp 1 0.406762893099224 1 0.160151481628418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51117087 chr12:51117091 synonymous SNV . 0 25 hm5C_associated_SNPs_19737 0 0 1 FXR2 POSTAR2 ENCODE chr12:51117035-51117102
64251 chr16 29810042 29810042 1 + T C COAD 29810025 + 29810005 29810045 41 TGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCATGTCTT TGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCATGCCTT < 41bp 1 0.147574446473851 1 0.0231205523014069 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810025 chr16:29810042 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_19738 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29810019-29810051
64251 chr4 103522084 103522084 1 + C T COAD 103522101 + 103522081 103522121 41 ATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT ATTTTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT < 41bp 1 0.154170978016259 1 0.37762451171875 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103522101 chr4:103522084 nonsynonymous SNV 0.966 0 4 hm5C_associated_SNPs_19740 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:103522065-103522092
64251 chr15 29346682 29346682 1 + G A COAD 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCAAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG < 41bp 1 0.7398759347856 1 0.31683087348938 experiment 0.5202481304288 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346682 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_19741 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346644-29346682
64251 chr15 29346682 29346682 1 + G A COAD 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT AAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT < 41bp 1 0.706161756831141 1 0.72688102722168 experiment 0.587676486337718 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346682 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_19742 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346644-29346682
64251 chr12 101711340 101711340 1 + C T COAD 101711330 + 101711310 101711350 41 AAAAGGCAAAGGGATGGTGGCAGAGGAAATCGAAGAGGAAC AAAAGGCAAAGGGATGGTGGCAGAGGAAATTGAAGAGGAAC < 41bp 1 0.330214534907348 1 0.664908170700073 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711330 chr12:101711340 synonymous SNV . 0 31 hm5C_associated_SNPs_19744 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr12 101711340 101711340 1 + C T COAD 101711351 + 101711331 101711371 41 AGAGGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAG AGAGGAAATTGAAGAGGAACCTGCCGCAGGAGATGATGAAG < 41bp 1 0.359783965859502 1 0.693605959415436 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711351 chr12:101711340 synonymous SNV . 0 10 hm5C_associated_SNPs_19745 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr12 101711340 101711340 1 + C T COAD 101711354 + 101711334 101711374 41 GGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGT GGAAATTGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGT < 41bp 1 0.274217829181684 1 0.501982629299164 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711354 chr12:101711340 synonymous SNV . 0 7 hm5C_associated_SNPs_19746 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr12 101711340 101711340 1 + C T COAD 101711355 + 101711335 101711375 41 GAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTT GAAATTGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTT < 41bp 1 0.426185784574688 1 0.592441201210022 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711355 chr12:101711340 synonymous SNV . 0 6 hm5C_associated_SNPs_19747 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr12 101711340 101711340 1 + C T COAD 101711357 + 101711337 101711377 41 AATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTTGG AATTGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTTGG < 41bp 1 0.74983971419212 1 0.836866974830627 experiment 0.500320571615759 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711357 chr12:101711340 synonymous SNV . 0 4 hm5C_associated_SNPs_19748 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:101711339-101711340
64251 chr1 198233281 198233281 1 + A C COAD 198233263 + 198233243 198233283 41 TTATTTTCTCAGCAACTCAACCATCCAAATGTAATAAAATA TTATTTTCTCAGCAACTCAACCATCCAAATGTAATAAACTA < 41bp 1 0.0142907209415921 1 0.137663185596466 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233263 chr1:198233281 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_19749 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:198233251-198233284
64251 chr1 198233281 198233281 1 + A C COAD 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAACTATTATGCATCATTCATTGAAGATAATGAACTAAA < 41bp 1 0.109682073976884 1 0.302419394254684 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233281 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_19750 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:198233251-198233284
64251 chr22 38352844 38352844 1 + G A COAD 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT GAGGATGAAGGGCTAGATGACTTGGAGAATGCCAAAGAGGT < 41bp 1 0.477569057320976 1 0.194418340921402 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352844 nonsynonymous SNV 0.925 1 34 hm5C_associated_SNPs_19751 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:38352782-38352850
64251 chr22 38352844 38352844 1 + G A COAD 38352843 + 38352823 38352863 41 CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGCC CTAGATGACTTGGAGAATGCCAAAGAGGTCAGTATTCAGCC < 41bp 1 0.587676181847692 1 0.520115494728088 experiment 0.824647636304617 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352843 chr22:38352844 nonsynonymous SNV 0.925 1 22 hm5C_associated_SNPs_19752 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:38352782-38352850
64251 chr5 102343184 102343184 1 + C T COAD 102343174 + 102343154 102343194 41 TCTGCAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTT TCTGCAGAGTCTTCAGGGAGCAGTCCTCTGTCAGGCCAGTT < 41bp 1 0.12651001444726 1 0.168356508016586 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAM ENSG00000145730 CDS Human protein_coding chr5:102343174 chr5:102343184 nonsynonymous SNV 0.769 3 31 hm5C_associated_SNPs_19753 0 0 1 RPS3 POSTAR2 ENCODE chr5:102343167-102343261
64251 chr8 107752665 107752665 1 + G A COAD 107752684 + 107752664 107752704 41 CGAACAATGACAGGTTTAGACACCCCAGTGCTGATGGTGAT CAAACAATGACAGGTTTAGACACCCCAGTGCTGATGGTGAT < 41bp 1 0.333522924229847 1 0.182835131883621 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXR1 ENSG00000164830 CDS Human protein_coding chr8:107752684 chr8:107752665 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_19754 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:107752637-107752668
64251 chr17 47119664 47119664 1 + G T COAD 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCGATAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA < 41bp 1 0.109777329204083 1 0.221370816230774 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119664 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_19755 0 0 20 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr17 47119664 47119664 1 + G T COAD 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCGATAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA < 41bp 1 0.332899117684689 1 0.212129563093185 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119664 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_19756 0 0 20 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr7 4002347 4002347 1 + G A COAD 4002345 + 4002325 4002365 41 CCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG CCATCTCCATCAGCAGGCTCCAAAATCCTCGATACAAAGTG < 41bp 1 0.141550849009048 1 0.234192967414856 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SDK1 ENSG00000146555 CDS Human protein_coding chr7:4002345 chr7:4002347 synonymous SNV . 0 23 hm5C_associated_SNPs_19760 0 0 1 GRWD1 POSTAR2 ENCODE chr7:4002303-4002476
64251 chr2 135883788 135883788 1 + G A COAD 135883796 + 135883776 135883816 41 CCTCATCTGACCGAAGGGATCATTGTGGATAATGATGTTTA CCTCATCTGACCAAAGGGATCATTGTGGATAATGATGTTTA < 41bp 1 0.116585997571818 1 0.0839249193668365 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135883796 chr2:135883788 nonsynonymous SNV 0.915 4 13 hm5C_associated_SNPs_19761 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:135883779-135883805
64251 chr12 13232900 13232900 1 + G A COAD 13232896 + 13232876 13232916 41 CCAAAATTGGCCGTGGGGAGCTGCGAAGATTTCTCTCTAGG CCAAAATTGGCCGTGGGGAGCTGCAAAGATTTCTCTCTAGG < 41bp 1 0.66996269731816 1 0.285153120756149 experiment 0.66007460536368 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234B ENSG00000084444 CDS Human protein_coding chr12:13232896 chr12:13232900 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_19762 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334287 chr12:13232880-13232900
64251 chr19 42855623 42855623 1 + C T COAD 42855632 + 42855612 42855652 41 TCTAGCCAGTGCGCCTGGTGCCAGTCCACCCACACCTGCTT TCTAGCCAGTGTGCCTGGTGCCAGTCCACCCACACCTGCTT < 41bp 1 0.0908721421503405 1 0.0859840214252472 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42855632 chr19:42855623 synonymous SNV . 0 12 hm5C_associated_SNPs_19763 0 0 1 PPIG POSTAR2 ENCODE chr19:42855580-42855629
64251 chr2 224824263 224824263 1 + G A COAD 224824275 + 224824255 224824295 41 GAGAAGCCGAACTGGGATTACCATGCAGAAATACAAGCTTT GAGAAGCCAAACTGGGATTACCATGCAGAAATACAAGCTTT < 41bp 1 0.127348156968072 1 0.242820084095001 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824275 chr2:224824263 synonymous SNV . 0 9 hm5C_associated_SNPs_19764 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:224824257-224824280
64251 chr6 72003252 72003252 1 + G A COAD 72003257 + 72003237 72003277 41 ACTTCAAAGATATCCGATATCAAAATGACTTGAGCAATCTT ACTTCAAAGATATCCAATATCAAAATGACTTGAGCAATCTT < 41bp 1 0.652288131873508 1 0.377761662006378 experiment 0.695423736252983 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003257 chr6:72003252 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_19765 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:72003235-72003272
64251 chr1 154304480 154304480 1 + A C COAD 154304485 + 154304465 154304505 41 TGGGCTGTGTTACATAGAGACAGCAGAACTTGATGGGTAAG TGGGCTGTGTTACATCGAGACAGCAGAACTTGATGGGTAAG < 41bp 1 0.628082232886653 1 0.382967114448547 experiment 0.743835534226694 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154304485 chr1:154304480 synonymous SNV . 0 16 hm5C_associated_SNPs_19767 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:154304470-154304508
64251 chr9 131455942 131455942 1 + C T COAD 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGACGAAACGTTCGAGTCAAATGCAGAAT < 41bp 1 0.111549179623361 1 0.0575315058231354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455942 nonsynonymous SNV 0.998 1 34 hm5C_associated_SNPs_19768 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr8 124811872 124811872 1 + G A COAD 124811871 + 124811851 124811891 41 TGTCCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT TGTCCAAAGGTACAAGACTTCAAAAACTGCCAGATATATTT < 41bp 1 0.688490233442589 1 0.475653320550919 experiment 0.623019533114823 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124811871 chr8:124811872 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_19769 0 0 3 DDX24 POSTAR2 ENCODE chr8:124811826-124811873
64251 chr12 56347543 56347543 1 + C A COAD 56347561 + 56347541 56347581 41 TTCTTGAGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC TTATTGAGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC < 41bp 1 0.250824776097565 1 0.0615386962890625 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKA ENSG00000065357 CDS Human protein_coding chr12:56347561 chr12:56347543 nonsynonymous SNV 0.887 1 3 hm5C_associated_SNPs_19771 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56347534-56347557
64251 chr5 72187658 72187658 1 + C T COAD 72187646 + 72187626 72187666 41 ATTGTAAATAGGAATATATTCAGATGCTAATGCCTCCACTG ATTGTAAATAGGAATATATTCAGATGCTAATGTCTCCACTG < 41bp 1 0.596292159051243 1 0.801020920276642 experiment 0.807415681897515 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187646 chr5:72187658 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_19776 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187652 + 72187632 72187672 41 AATAGGAATATATTCAGATGCTAATGCCTCCACTGATCCAG AATAGGAATATATTCAGATGCTAATGTCTCCACTGATCCAG < 41bp 1 0.273068046470681 1 0.0739661455154419 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187652 chr5:72187658 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_19777 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187659 + 72187639 72187679 41 ATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGA ATATATTCAGATGCTAATGTCTCCACTGATCCAGAAATGGA < 41bp 1 0.494494750514969 1 0.918358206748962 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187659 chr5:72187658 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_19778 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187661 + 72187641 72187681 41 ATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAAC ATATTCAGATGCTAATGTCTCCACTGATCCAGAAATGGAAC < 41bp 1 0.122732896035422 1 0.107120424509048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187661 chr5:72187658 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_19779 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187662 + 72187642 72187682 41 TATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACA TATTCAGATGCTAATGTCTCCACTGATCCAGAAATGGAACA < 41bp 1 0.182444494455049 1 0.270195811986923 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187662 chr5:72187658 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_19780 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187664 + 72187644 72187684 41 TTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAACATG TTCAGATGCTAATGTCTCCACTGATCCAGAAATGGAACATG < 41bp 1 0.206568259754855 1 0.0753190219402313 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187664 chr5:72187658 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_19781 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187669 + 72187649 72187689 41 ATGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAA ATGCTAATGTCTCCACTGATCCAGAAATGGAACATGTTAAA < 41bp 1 0.489985234038513 1 0.820715665817261 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187669 chr5:72187658 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_19782 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr5 72187658 72187658 1 + C T COAD 72187670 + 72187650 72187690 41 TGCTAATGCCTCCACTGATCCAGAAATGGAACATGTTAAAG TGCTAATGTCTCCACTGATCCAGAAATGGAACATGTTAAAG < 41bp 1 0.620455032264837 1 0.534485697746277 experiment 0.759089935470326 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187670 chr5:72187658 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_19783 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:72187640-72187660
64251 chr2 191523976 191523976 1 + C A COAD 191523972 + 191523952 191523992 41 TATTACAAAAAGCCAATCTACTTTCTTATTTTGATGCCTTT TATTACAAAAAGCCAATCTACTTTATTATTTTGATGCCTTT < 41bp 1 0.311698105246656 1 0.128427714109421 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191523972 chr2:191523976 nonsynonymous SNV 0.884 2 25 hm5C_associated_SNPs_19784 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:191523963-191523984
64251 chr11 95561132 95561132 1 + T G COAD 95561126 + 95561106 95561146 41 GTAACACCTCCCTCCTCCAACGGTATTAATGAGGAGTTGTC GTAACACCTCCCTCCTCCAACGGTATGAATGAGGAGTTGTC < 41bp 1 0.6078590605732 1 0.310861706733704 experiment 0.7842818788536 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95561126 chr11:95561132 nonsynonymous SNV 0.105 0 27 hm5C_associated_SNPs_19785 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:95561125-95561146
64251 chr8 143782013 143782013 1 + C T COAD 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACCTGACTGTGAGACAACGAGATCCAGAGGACTCC < 41bp 1 0.686675769724399 1 0.0853424966335297 experiment 0.626648460551202 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782013 nonsynonymous SNV 0.125 0 16 hm5C_associated_SNPs_19787 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chr17 16343404 16343404 1 + A C COAD 16343415 + 16343395 16343435 41 CTGACGAAGACTACTCCTGTCTGATTGCAGTCAAGTCTTCA CTGACGAAGCCTACTCCTGTCTGATTGCAGTCAAGTCTTCA < 41bp 1 0.229408481149283 1 0.0399780571460724 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49A ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16343415 chr17:16343404 . . 0 10 hm5C_associated_SNPs_19788 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16343390-16343420
64251 chr18 13029787 13029787 1 + G A COAD 13029800 + 13029780 13029820 41 TAAAACAGGGGGCAGAGTGTCCTCACCAAAATAAGACAGTT TAAAACAAGGGGCAGAGTGTCCTCACCAAAATAAGACAGTT < 41bp 1 0.137378736322622 1 0.163828194141388 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13029800 chr18:13029787 synonymous SNV . 0 8 hm5C_associated_SNPs_19792 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chr18:13029780-13029800
64251 chr1 109772139 109772139 1 + A G COAD 109772124 + 109772104 109772144 41 GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAGCCTCC < 41bp 1 0.622503036173608 1 0.847208321094513 experiment 0.754993927652783 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772124 chr1:109772139 nonsynonymous SNV 0.996 0 36 hm5C_associated_SNPs_19793 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 109772139 109772139 1 + A G COAD 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAGCCTCCGAGAG < 41bp 1 0.549610953455488 1 0.304604649543762 experiment 0.900778093089025 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772139 nonsynonymous SNV 0.996 0 31 hm5C_associated_SNPs_19794 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr9 91083295 91083295 1 + C T COAD 91083287 + 91083267 91083307 41 TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGATG TTTTTTTTTTTAATCCCCAGCGACATCTTGAATCAGCGATG < 41bp 1 0.333441667927077 1 0.441511482000351 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083287 chr9:91083295 stopgain 0.612 0 29 hm5C_associated_SNPs_19795 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr9:91083277-91083298
64251 chr8 104343622 104343622 1 + T C COAD 104343630 + 104343610 104343650 41 AGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAGC AGAGCAACAATTCGCAGGTCCCCAGTTCTTCAGAACCAAGC < 41bp 1 0.243253250329792 1 0.0627421140670776 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343630 chr8:104343622 nonsynonymous SNV 0.728 0 13 hm5C_associated_SNPs_19796 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:104343617-104343628
64251 chr8 124811865 124811865 1 + A G COAD 124811871 + 124811851 124811891 41 TGTCCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT TGTCCAAAGGTACAGGACTTCGAAAACTGCCAGATATATTT < 41bp 1 0.715420352373028 1 0.717802464962006 experiment 0.569159295253943 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124811871 chr8:124811865 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_19797 0 0 3 DDX24 POSTAR2 ENCODE chr8:124811826-124811873
64251 chr15 45003782 45003782 1 + T C COAD 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTCGCGCTACCCTCTCTTTCTGGCCTGGAGGCTATC < 41bp 1 0.121377885520226 1 0.0632613897323608 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003782 nonsynonymous SNV 0.001 1 16 hm5C_associated_SNPs_19798 0 0 41 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr1 53420454 53420454 1 + G C COAD 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGAAGATGACTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.367534661542813 1 0.183730065822601 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420454 nonsynonymous SNV 0.822 1 10 hm5C_associated_SNPs_19799 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr7 65610471 65610471 1 + C T COAD 65610481 + 65610461 65610501 41 CCTGTGACTGCTGTGGAGATCCAGCTGGTGAGTGAAGGGCG CCTGTGACTGTTGTGGAGATCCAGCTGGTGAGTGAAGGGCG < 41bp 1 0.576697146955096 1 0.432409405708313 experiment 0.846605706089808 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CRCP ENSG00000241258;ENSG00000249319 CDS Human other chr7:65610481 chr7:65610471 nonsynonymous SNV 0.972 3 11 hm5C_associated_SNPs_19800 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:65610451-65610472
64251 chr9 135942520 135942520 1 + G A COAD 135942509 + 135942489 135942529 41 GGGTTGCCCTGTGGGTGATGCCGCCAGGATGGCCCAGTGTC GGGTTGCCCTGTGGGTGATGCCGCCAGGATGACCCAGTGTC < 41bp 1 0.1893876561312 1 0.124866485595703 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942509 chr9:135942520 nonsynonymous SNV 0.956 3 32 hm5C_associated_SNPs_19805 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942520 135942520 1 + G A COAD 135942512 + 135942492 135942532 41 TTGCCCTGTGGGTGATGCCGCCAGGATGGCCCAGTGTCTGA TTGCCCTGTGGGTGATGCCGCCAGGATGACCCAGTGTCTGA < 41bp 1 0.437589703619267 1 0.413534045219421 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942512 chr9:135942520 nonsynonymous SNV 0.956 3 29 hm5C_associated_SNPs_19806 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942520 135942520 1 + G A COAD 135942521 + 135942501 135942541 41 GGGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTG GGGTGATGCCGCCAGGATGACCCAGTGTCTGAAGGTTACTG < 41bp 1 0.315074595520656 1 0.0358794331550598 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942521 chr9:135942520 nonsynonymous SNV 0.956 3 20 hm5C_associated_SNPs_19807 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942520 135942520 1 + G A COAD 135942522 + 135942502 135942542 41 GGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTGA GGTGATGCCGCCAGGATGACCCAGTGTCTGAAGGTTACTGA < 41bp 1 0.4812011365173 1 0.391193956136703 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942522 chr9:135942520 nonsynonymous SNV 0.956 3 19 hm5C_associated_SNPs_19808 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942520 135942520 1 + G A COAD 135942523 + 135942503 135942543 41 GTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTGAT GTGATGCCGCCAGGATGACCCAGTGTCTGAAGGTTACTGAT < 41bp 1 0.434595146523855 1 0.616484403610229 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942523 chr9:135942520 nonsynonymous SNV 0.956 3 18 hm5C_associated_SNPs_19809 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942520 135942520 1 + G A COAD 135942539 + 135942519 135942559 41 GGCCCAGTGTCTGAAGGTTACTGATCCCCGAGCCCTGACGC GACCCAGTGTCTGAAGGTTACTGATCCCCGAGCCCTGACGC < 41bp 1 0.564906128315826 1 0.0393069982528687 experiment 0.870187743368348 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942539 chr9:135942520 nonsynonymous SNV 0.956 3 2 hm5C_associated_SNPs_19810 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr10 72324246 72324246 1 + C T COAD 72324236 + 72324216 72324256 41 TACCTCCACCTGGAGAAGGCCGACTCCTGGCAGAGGCCCTT TACCTCCACCTGGAGAAGGCCGACTCCTGGTAGAGGCCCTT < 41bp 1 0.143416046023176 1 0.461002051830292 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control PALD1 ENSG00000107719 CDS Human protein_coding chr10:72324236 chr10:72324246 stopgain 0.990 1 31 hm5C_associated_SNPs_19811 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:72324237-72324264
64251 chr5 72201211 72201211 1 + C T COAD 72201196 + 72201176 72201216 41 GTTTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTT GTTTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGTGTCTT < 41bp 1 0.170521193017412 1 0.41856837272644 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72201196 chr5:72201211 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_19812 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:72201201-72201224
64251 chrX 53223831 53223831 1 - T C COAD 53223826 - 53223806 53223846 41 GCCCAGTCCACTGGCATCATCGAGCACGGCCTCCTCTACAA GCCCAGTCCACTGGCGTCATCGAGCACGGCCTCCTCTACAA < 41bp 1 0.611709167607299 1 0.920989274978638 experiment 0.776581664785402 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM5C ENSG00000126012 CDS Human protein_coding chrX:53223826 chrX:53223831 synonymous SNV . 0 16 hm5C_associated_SNPs_19813 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chrX:53223794-53223832
64251 chr7 44741172 44741172 1 + C T COAD 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GTGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC < 41bp 1 0.199445253518432 1 0.707032561302185 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741172 nonsynonymous SNV 0.997 5 2 hm5C_associated_SNPs_19815 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr9 116971982 116971982 1 + G A COAD 116971985 + 116971965 116972005 41 GGCTCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA GGCTCCCAGGGCTCTTCAGCCTGCCAGGGTCTGATGGAGAA < 41bp 1 0.165048248518803 1 0.345970690250397 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971985 chr9:116971982 nonsynonymous SNV 0.989 4 18 hm5C_associated_SNPs_19816 0 0 6 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971982 116971982 1 + G A COAD 116971988 + 116971968 116972008 41 TCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGA TCCCAGGGCTCTTCAGCCTGCCAGGGTCTGATGGAGAACGA < 41bp 1 0.149253872567295 1 0.773936092853546 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971988 chr9:116971982 nonsynonymous SNV 0.989 4 15 hm5C_associated_SNPs_19817 0 0 6 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971982 116971982 1 + G A COAD 116971989 + 116971969 116972009 41 CCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGAG CCCAGGGCTCTTCAGCCTGCCAGGGTCTGATGGAGAACGAG < 41bp 1 0.281388220789576 1 0.679240465164185 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971989 chr9:116971982 nonsynonymous SNV 0.989 4 14 hm5C_associated_SNPs_19818 0 0 6 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr17 41345565 41345565 1 + A G COAD 41345576 + 41345556 41345596 41 TATCATAGTAGATCCTTTCCCCTCCGAAGAGAGCCCTGATA TATCATAGTGGATCCTTTCCCCTCCGAAGAGAGCCCTGATA < 41bp 1 0.167109578690087 1 0.385305523872375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345576 chr17:41345565 synonymous SNV . 0 10 hm5C_associated_SNPs_19819 0 0 4 BUD13 POSTAR2 ENCODE chr17:41345561-41345590
64251 chr19 14512321 14512321 1 + C A COAD 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATCATGAGGATCATGGCCAAGAGCCTGCCTAA < 41bp 1 0.527825590664819 1 0.103241831064224 experiment 0.944348818670363 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512321 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_19820 0 0 1 SND1 POSTAR2 ENCODE chr19:14512310-14512376
64251 chrX 56592162 56592162 1 + T C COAD 56592147 + 56592127 56592167 41 AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCTGGGCT AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCCGGGCT < 41bp 1 0.0714868442804233 1 0.163802415132523 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592147 chrX:56592162 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_19821 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:56592152-56592175
64251 chr1 6681491 6681491 1 + G A COAD 6681488 + 6681468 6681508 41 CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTGCATG CAGATGACGATTCCTGGGACCTCATGACCTGCTTCTGCATG < 41bp 1 0.206064383879523 1 0.00625073909759521 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681488 chr1:6681491 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_19822 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:6681472-6681500
64251 chr14 96998735 96998735 1 + A T COAD 96998728 + 96998708 96998748 41 CATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTAT CATTGACAACTTCAGGTTAACTCTGAGTGCTATCAAACTAT < 41bp 1 0.505166377863486 1 0.0705487728118896 experiment 0.989667244273027 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96998728 chr14:96998735 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_19823 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:96998689-96998753
64251 chr1 41215348 41215348 1 + G A COAD 41215344 + 41215324 41215364 41 TTCACACAGAAGATAACAAGCGCCGGACTCTACAGGTATTA TTCACACAGAAGATAACAAGCGCCAGACTCTACAGGTATTA < 41bp 1 0.743054521050309 1 0.425836771726608 experiment 0.513890957899382 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFYC ENSG00000066136 CDS Human protein_coding chr1:41215344 chr1:41215348 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_19824 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:41215255-41215374
64251 chr9 20990241 20990241 1 + G A COAD 20990239 + 20990219 20990259 41 CATGGCATCAGGAGAATGGCCCGGCTGGGCCAGTACCAAGC CATGGCATCAGGAGAATGGCCCAGCTGGGCCAGTACCAAGC < 41bp 1 0.191450129847875 1 0.439887017011642 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990239 chr9:20990241 synonymous SNV . 0 23 hm5C_associated_SNPs_19825 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990241 20990241 1 + G A COAD 20990248 + 20990228 20990268 41 AGGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGC AGGAGAATGGCCCAGCTGGGCCAGTACCAAGCTTCCTTGGC < 41bp 1 0.175157773739094 1 0.0683084428310394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990248 chr9:20990241 synonymous SNV . 0 14 hm5C_associated_SNPs_19826 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990241 20990241 1 + G A COAD 20990249 + 20990229 20990269 41 GGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCA GGAGAATGGCCCAGCTGGGCCAGTACCAAGCTTCCTTGGCA < 41bp 1 0.357757320425405 1 0.0852702856063843 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990249 chr9:20990241 synonymous SNV . 0 13 hm5C_associated_SNPs_19827 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr1 171527219 171527219 1 + A G COAD 171527220 + 171527200 171527240 41 ACAGTCACATGGCACTCTGACAGCTGAATTATGGGATAACA ACAGTCACATGGCACTCTGGCAGCTGAATTATGGGATAACA < 41bp 1 0.269258789972442 1 0.334479421377182 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171527220 chr1:171527219 nonsynonymous SNV 0.989 0 20 hm5C_associated_SNPs_19828 0 0 27 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:171527127-171527239
64251 chr12 112321467 112321467 1 + G A COAD 112321465 + 112321445 112321485 41 TTTTACTCCAAACACCACAGCCGGACTATCCCAAAGGATAT TTTTACTCCAAACACCACAGCCAGACTATCCCAAAGGATAT < 41bp 1 0.254942832978757 1 0.110167950391769 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321465 chr12:112321467 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_19830 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chr12 112321467 112321467 1 + G A COAD 112321470 + 112321450 112321490 41 CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCGAA CTCCAAACACCACAGCCAGACTATCCCAAAGGATATGCGAA < 41bp 1 0.0560072657331333 1 0.177148729562759 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321470 chr12:112321467 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_19831 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chr16 81053859 81053859 1 + G A COAD 81053845 + 81053825 81053865 41 CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCACAATAC < 41bp 1 0.773559172785667 1 0.918947577476501 experiment 0.452881654428667 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPN ENSG00000166451 CDS Human protein_coding chr16:81053845 chr16:81053859 nonsynonymous SNV 0.002 1 35 hm5C_associated_SNPs_19832 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:81053833-81053862
64251 chr1 39888087 39888087 1 + G T COAD 39888071 + 39888051 39888091 41 TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGC TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTTCAGC < 41bp 1 0.0283162211182888 1 0.192198157310486 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39888071 chr1:39888087 nonsynonymous SNV 0.999 3 37 hm5C_associated_SNPs_19834 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39888058-39888134
64251 chr11 71939506 71939506 1 + C T COAD 71939492 + 71939472 71939512 41 TGTGTGCGCCCTGCTTCTTCCTGTAGAGGGTGAGCGAGAGC TGTGTGCGCCCTGCTTCTTCCTGTAGAGGGTGAGTGAGAGC < 41bp 1 0.628330547759138 1 0.705841600894928 experiment 0.743338904481723 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71939492 chr11:71939506 stopgain 0.873 1 35 hm5C_associated_SNPs_19835 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:71939489-71939512
64251 chr16 2814598 2814598 1 + G T COAD 2814601 + 2814581 2814621 41 TTAAAGAAGATTTGAATGGACCGTTTCTTAATCAGCTGGAA TTAAAGAAGATTTGAATTGACCGTTTCTTAATCAGCTGGAA < 41bp 1 0.0440448559897941 1 0.0380530059337616 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814601 chr16:2814598 stopgain 0.988 0 18 hm5C_associated_SNPs_19840 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr16 2814598 2814598 1 + G T COAD 2814613 + 2814593 2814633 41 TGAATGGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT TGAATTGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT < 41bp 1 0.269570732598262 1 0.819846510887146 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814613 chr16:2814598 stopgain 0.988 0 6 hm5C_associated_SNPs_19841 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr1 145663167 145663167 1 + C T COAD 145663168 + 145663148 145663188 41 GTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTTT GTCTTTACTAGCTTTGGGGTCATTTGGATCACACGATGTTT < 41bp 1 0.0313023617947198 1 0.0487439036369324 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF115 ENSG00000121848 CDS Human other chr1:145663168 chr1:145663167 synonymous SNV . 0 20 hm5C_associated_SNPs_19842 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr7 100867230 100867230 1 + G A COAD 100867232 + 100867212 100867252 41 CTGCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCC CTGCAGGTGTCTGAAGTGAACTGTGTGAGCCTGGGCATTCC < 41bp 1 0.738340385973267 1 0.203435957431793 experiment 0.523319228053466 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867232 chr7:100867230 stopgain 0.991 1 19 hm5C_associated_SNPs_19843 0 0 10 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 100867230 100867230 1 + G A COAD 100867242 + 100867222 100867262 41 CTGAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA CTGAAGTGAACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA < 41bp 1 0.732362733285964 1 0.171965599060059 experiment 0.535274533428071 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867242 chr7:100867230 stopgain 0.991 1 9 hm5C_associated_SNPs_19844 0 0 10 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr10 75830535 75830535 1 + T C COAD 75830552 + 75830532 75830572 41 TCCTCTCTGGAACATCAGACCTGCTCCTTACCTTCGATGAG TCCCCTCTGGAACATCAGACCTGCTCCTTACCTTCGATGAG < 41bp 1 0.329063844300994 1 0.0345292985439301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75830552 chr10:75830535 nonsynonymous SNV 0.996 4 4 hm5C_associated_SNPs_19845 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:75830511-75830541
64251 chr1 109803848 109803848 1 + C T COAD 109803866 + 109803846 109803886 41 CGCGGCCTGCGCCAGCGTTTCCACTTCACCCTGGCCCTCTC CGTGGCCTGCGCCAGCGTTTCCACTTCACCCTGGCCCTCTC < 41bp 1 0.175472475391602 1 0.33540678024292 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109803866 chr1:109803848 synonymous SNV . 0 3 hm5C_associated_SNPs_19849 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109803836-109803860
64251 chr12 132400513 132400513 1 + T C COAD 132400500 + 132400480 132400520 41 TGCCGCCTGCACAGCGCCCCCAACCTGTCTGACTTGCACGT TGCCGCCTGCACAGCGCCCCCAACCTGTCTGACCTGCACGT < 41bp 1 0.221488851074296 1 0.113116055727005 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400500 chr12:132400513 synonymous SNV . 0 34 hm5C_associated_SNPs_19850 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132400495-132400519
64251 chr14 73576075 73576075 1 + C T COAD 73576058 + 73576038 73576078 41 TCACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGCGTG TCACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGTGTG < 41bp 1 0.0944222552452767 1 0.0988493263721466 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576058 chr14:73576075 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_19851 0 0 19 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr14 73576075 73576075 1 + C T COAD 73576060 + 73576040 73576080 41 ACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGCGTGAT ACTTTTACAGAGGAAGTGCTCTTCAGAAAAGGTTGTGTGAT < 41bp 1 0.553176503920816 1 0.264403343200684 experiment 0.893646992158368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576060 chr14:73576075 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_19852 0 0 19 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:73576040-73576080
64251 chr2 207174090 207174090 1 + T C COAD 207174099 + 207174079 207174119 41 CTATATTATTCTGGGAGAGCCAAGTTGTCAATCTTGTGGTT CTATATTATTCCGGGAGAGCCAAGTTGTCAATCTTGTGGTT < 41bp 1 0.366023180422263 1 0.674972593784332 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174099 chr2:207174090 nonsynonymous SNV 0.429 3 12 hm5C_associated_SNPs_19853 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207173963-207174109
64251 chr11 67017880 67017880 1 + G T COAD 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAATATCCGGGGATCGTACCTCACTGTCACGCTAC < 41bp 1 0.102422575148217 1 0.0794655084609985 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017880 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_19854 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67017853-67017899
64251 chr19 19638843 19638843 1 + C T COAD 19638852 + 19638832 19638872 41 TCCACACAACCCGCTGGGTGCCCCCCTTGATCGGGGAGCTG TCCACACAACCTGCTGGGTGCCCCCCTTGATCGGGGAGCTG < 41bp 1 0.114956962461149 1 0.039694756269455 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638852 chr19:19638843 nonsynonymous SNV 0.377 4 12 hm5C_associated_SNPs_19855 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr14 75746599 75746599 1 + C T COAD 75746582 + 75746562 75746602 41 CCTTCTGTTTTGTTCTAGGACTTCTGCACGGACCTGGCCGT CCTTCTGTTTTGTTCTAGGACTTCTGCACGGACCTGGTCGT < 41bp 1 0.177200683583836 1 0.0185528993606567 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746582 chr14:75746599 nonsynonymous SNV 0.981 0 38 hm5C_associated_SNPs_19856 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746590 + 75746570 75746610 41 TTTGTTCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTG TTTGTTCTAGGACTTCTGCACGGACCTGGTCGTCTCCAGTG < 41bp 1 0.418926907171918 1 0.165351539850235 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746590 chr14:75746599 nonsynonymous SNV 0.981 0 30 hm5C_associated_SNPs_19857 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746594 + 75746574 75746614 41 TTCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAA TTCTAGGACTTCTGCACGGACCTGGTCGTCTCCAGTGCCAA < 41bp 1 0.215671228740254 1 0.10753932595253 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746594 chr14:75746599 nonsynonymous SNV 0.981 0 26 hm5C_associated_SNPs_19858 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746595 + 75746575 75746615 41 TCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAAC TCTAGGACTTCTGCACGGACCTGGTCGTCTCCAGTGCCAAC < 41bp 1 0.560883116750792 1 0.0788122415542603 experiment 0.878233766498416 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746595 chr14:75746599 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_19859 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746600 + 75746580 75746620 41 GACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCAT GACTTCTGCACGGACCTGGTCGTCTCCAGTGCCAACTTCAT < 41bp 1 0.0851974095351506 1 0.037002295255661 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746600 chr14:75746599 nonsynonymous SNV 0.981 0 20 hm5C_associated_SNPs_19860 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746605 + 75746585 75746625 41 CTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCATTCCCA CTGCACGGACCTGGTCGTCTCCAGTGCCAACTTCATTCCCA < 41bp 1 0.395048525990696 1 0.246343225240707 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746605 chr14:75746599 nonsynonymous SNV 0.981 0 15 hm5C_associated_SNPs_19861 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746606 + 75746586 75746626 41 TGCACGGACCTGGCCGTCTCCAGTGCCAACTTCATTCCCAC TGCACGGACCTGGTCGTCTCCAGTGCCAACTTCATTCCCAC < 41bp 1 0.453106760624916 1 0.81266975402832 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746606 chr14:75746599 nonsynonymous SNV 0.981 0 14 hm5C_associated_SNPs_19862 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746611 + 75746591 75746631 41 GGACCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGTCA GGACCTGGTCGTCTCCAGTGCCAACTTCATTCCCACGGTCA < 41bp 1 0.0674477231258913 1 0.0567258298397064 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746611 chr14:75746599 nonsynonymous SNV 0.981 0 9 hm5C_associated_SNPs_19863 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746612 + 75746592 75746632 41 GACCTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGTCAC GACCTGGTCGTCTCCAGTGCCAACTTCATTCCCACGGTCAC < 41bp 1 0.28765995949241 1 0.145311832427979 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746612 chr14:75746599 nonsynonymous SNV 0.981 0 8 hm5C_associated_SNPs_19864 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746615 + 75746595 75746635 41 CTGGCCGTCTCCAGTGCCAACTTCATTCCCACGGTCACTGC CTGGTCGTCTCCAGTGCCAACTTCATTCCCACGGTCACTGC < 41bp 1 0.554517272205697 1 0.425160646438599 experiment 0.890965455588606 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746615 chr14:75746599 nonsynonymous SNV 0.981 0 5 hm5C_associated_SNPs_19865 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746599 75746599 1 + C T COAD 75746618 + 75746598 75746638 41 GCCGTCTCCAGTGCCAACTTCATTCCCACGGTCACTGCCAT GTCGTCTCCAGTGCCAACTTCATTCCCACGGTCACTGCCAT < 41bp 1 0.030707153654926 1 0.573199331760406 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746618 chr14:75746599 nonsynonymous SNV 0.981 0 2 hm5C_associated_SNPs_19866 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr20 62521229 62521229 1 + C T COAD 62521246 + 62521226 62521266 41 GAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG GAATGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG < 41bp 1 0.235406037825065 1 0.0503987073898315 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521246 chr20:62521229 synonymous SNV 0.971 0 4 hm5C_associated_SNPs_19867 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:62521200-62521238
64251 chr16 67006817 67006817 1 + G A COAD 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTCAACCAGGCGGAACAATATCTAGAGATCAACCCA < 41bp 1 0.268001301920251 1 0.218219369649887 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006817 synonymous SNV . 0 29 hm5C_associated_SNPs_19868 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr6 125550343 125550343 1 + G C COAD 125550344 + 125550324 125550364 41 GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT GAGATAAAACAAAAACTCGCCATGAACCTGATGAATGAATT < 41bp 1 0.249308268807236 1 0.0699096918106079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125550344 chr6:125550343 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_19869 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:125550333-125550400
64251 chr3 58092595 58092595 1 + G C COAD 58092593 + 58092573 58092613 41 AGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC AGCCACGGGAGGCTACAACCCTCATCTGGTGAATCAGCTGC < 41bp 1 0.324934037900224 1 0.504129230976105 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092593 chr3:58092595 nonsynonymous SNV 0.994 5 23 hm5C_associated_SNPs_19873 0 0 2 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58092595 58092595 1 + G C COAD 58092598 + 58092578 58092618 41 CGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC CGGGAGGCTACAACCCTCATCTGGTGAATCAGCTGCTGTGC < 41bp 1 0.508729157192465 1 0.381053566932678 experiment 0.982541685615069 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092598 chr3:58092595 nonsynonymous SNV 0.994 5 18 hm5C_associated_SNPs_19874 0 0 2 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr2 233681731 233681731 1 + C T COAD 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCGAGAGGAAGAAGAACTTGCCTGAAGGAAACAGGTA < 41bp 1 0.153715537753945 1 0.223865002393723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681731 stopgain 0.997 1 27 hm5C_associated_SNPs_19875 0 0 15 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681731 233681731 1 + C T COAD 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CGAGAGGAAGAAGAACTTGCCTGAAGGAAACAGGTATGTAT < 41bp 1 0.700752932263583 1 0.487634241580963 experiment 0.598494135472835 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681731 stopgain 0.997 1 22 hm5C_associated_SNPs_19876 0 0 15 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr19 806463 806463 1 + G T COAD 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCT < 41bp 1 0.383823480061708 1 0.0255390107631683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806463 synonymous SNV . 0 41 hm5C_associated_SNPs_19877 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806463 806463 1 + G T COAD 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCTG < 41bp 1 0.537348726471577 1 0.152504503726959 experiment 0.925302547056845 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806463 synonymous SNV . 0 40 hm5C_associated_SNPs_19878 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806463 806463 1 + G T COAD 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCTGC < 41bp 1 0.5278837487041 1 0.457901239395142 experiment 0.944232502591801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806463 synonymous SNV . 0 39 hm5C_associated_SNPs_19879 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806463 806463 1 + G T COAD 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCTGCG < 41bp 1 0.736693062104939 1 0.379019945859909 experiment 0.526613875790121 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806463 synonymous SNV . 0 38 hm5C_associated_SNPs_19880 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806463 806463 1 + G T COAD 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCTGCGGCGG < 41bp 1 0.0676208691593954 1 0.10689914226532 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806463 synonymous SNV . 0 34 hm5C_associated_SNPs_19881 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806463 806463 1 + G T COAD 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCTGCGGCGGC < 41bp 1 0.205688488143172 1 0.128438472747803 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806463 synonymous SNV . 0 33 hm5C_associated_SNPs_19882 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 11123732 11123732 1 + G A COAD 11123747 + 11123727 11123767 41 ATCACGTACCTCATGGAGCACAAACGCATCAATGGGCCCTT ATCACATACCTCATGGAGCACAAACGCATCAATGGGCCCTT < 41bp 1 0.166808554655197 1 0.0679062902927399 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11123747 chr19:11123732 synonymous SNV . 0 6 hm5C_associated_SNPs_19883 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:11123711-11123732
64251 chr3 14712639 14712639 1 + G A COAD 14712656 + 14712636 14712676 41 CAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT CAAACCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT < 41bp 1 0.442834057766539 1 0.506671011447906 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712656 chr3:14712639 nonsynonymous SNV 0.937 0 4 hm5C_associated_SNPs_19884 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:14712639-14712661
64251 chrX 153008757 153008757 1 + G A COAD 153008774 + 153008754 153008794 41 GACGCGGGCATTGCCCTGCTCTCCATCACCCACCGGCCCTC GACACGGGCATTGCCCTGCTCTCCATCACCCACCGGCCCTC < 41bp 1 0.77668065161402 1 0.919561743736267 experiment 0.44663869677196 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153008774 chrX:153008757 nonsynonymous SNV 0.816 2 4 hm5C_associated_SNPs_19886 0 0 1 PPIG POSTAR2 ENCODE chrX:153008737-153008778
64251 chrX 21995187 21995187 1 + C A COAD 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACACATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA < 41bp 1 0.157176460252246 1 0.443859785795212 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995187 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_19887 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:21995180-21995200
64251 chr11 73073120 73073120 1 + G A COAD 73073111 + 73073091 73073131 41 TGTGCGGCTCCCACCCTGAACAGCTGCCCGGAGCCCTCGCC TGTGCGGCTCCCACCCTGAACAGCTGCCCAGAGCCCTCGCC < 41bp 1 0.414137933604669 1 0.383868396282196 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73073111 chr11:73073120 synonymous SNV . 0 30 hm5C_associated_SNPs_19888 0 0 1 PPIG POSTAR2 ENCODE chr11:73073082-73073152
64251 chr19 10897276 10897276 1 + C A COAD 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG GGGAGTCGCTGCCGGCCATACGTAGCAAACTACAGAGCCAG < 41bp 1 0.273157928498065 1 0.244822442531586 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897276 nonsynonymous SNV 0.115 1 18 hm5C_associated_SNPs_19889 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10897245-10897280
64251 chr16 88780611 88780611 1 + C A COAD 88780612 + 88780592 88780632 41 AGGCTGCAGACCCAGTTCCCCTCCACTGTCAGCACTGTGTA AGGCTGCAGACCCAGTTCCACTCCACTGTCAGCACTGTGTA < 41bp 1 0.70743833382815 1 0.874043703079224 experiment 0.5851233323437 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780612 chr16:88780611 nonsynonymous SNV 0.906 4 20 hm5C_associated_SNPs_19890 0 0 2 DDX55 POSTAR2 ENCODE chr16:88780607-88780636
64251 chr5 68692323 68692323 1 + T A COAD 68692324 + 68692304 68692344 41 TCATTGCCAAGGAGGAGGATCAAGTTTTCGACCCTTGCACA TCATTGCCAAGGAGGAGGAACAAGTTTTCGACCCTTGCACA < 41bp 1 0.611617820591463 1 0.413990288972855 experiment 0.776764358817075 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD17 ENSG00000152942 CDS Human protein_coding chr5:68692324 chr5:68692323 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_19891 0 0 1 PPIG POSTAR2 ENCODE chr5:68692314-68692366
64251 chr1 16046284 16046284 1 + A G COAD 16046286 + 16046266 16046306 41 ACTACTACAAACCTCAGTACCTGCTGGACTTTGAAGACCGC ACTACTACAAACCTCAGTGCCTGCTGGACTTTGAAGACCGC < 41bp 1 0.232330096891153 1 0.333332479000092 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16046286 chr1:16046284 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_19892 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:16046261-16046288
64251 chr2 128867285 128867285 1 + T C COAD 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGACTTGTGAATCTGACACCCTTGAGGCTCTTCTACTGA < 41bp 1 0.0427943010891544 1 0.0876602232456207 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867285 synonymous SNV . 0 19 hm5C_associated_SNPs_19895 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:128867259-128867288
64251 chrX 41075213 41075213 1 + A G COAD 41075229 + 41075209 41075249 41 CTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTGCAAT CTAAGGCGATTTGACTATGACTGGGAAAGAGAATGTGCAAT < 41bp 1 0.38244337341899 1 0.124890595674515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41075229 chrX:41075213 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_19896 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41075168-41075231
64251 chr20 57289627 57289627 1 + C G COAD 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCGAGACAAGAGCCCCAGCTCCTGTGCTGGCCTC < 41bp 1 0.416030841954214 1 0.383446782827377 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289627 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_19897 0 0 2 LSM11 POSTAR2 ENCODE chr20:57289620-57289640
64251 chr8 37554688 37554688 1 + C T COAD 37554680 + 37554660 37554700 41 CAGCTGGACGCCAAGAAGAGCCCCTTGGCGCTGCTGGCTCA CAGCTGGACGCCAAGAAGAGCCCCTTGGTGCTGCTGGCTCA < 41bp 1 0.15763199155111 1 0.0920411050319672 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF703 ENSG00000183779 CDS Human protein_coding chr8:37554680 chr8:37554688 nonsynonymous SNV 0.997 2 29 hm5C_associated_SNPs_19899 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:37554660-37554720
64251 chr7 150068641 150068641 1 + G A COAD 150068639 + 150068619 150068659 41 GCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGC GCCCCCTTCTTAGCACTGCACCACCAGGTCCATGCTGCTGC < 41bp 1 0.165402858808849 1 0.02479487657547 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068639 chr7:150068641 nonsynonymous SNV 0.635 0 23 hm5C_associated_SNPs_19900 0 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150068580-150068740
64251 chrX 48564955 48564955 1 + G A COAD 48564940 + 48564920 48564960 41 TCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTC TCATAGACAACCTTGACGAGCGGCTGCCCCGCATCACTTTC < 41bp 1 0.38688798861062 1 0.180110812187195 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564940 chrX:48564955 nonsynonymous SNV 0.225 4 36 hm5C_associated_SNPs_19901 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:48564939-48564964
64251 chr16 66919208 66919208 1 + G A COAD 66919216 + 66919196 66919236 41 AGGCTACTGGGCGTCCTCATCCCCTGCAGGGCCTTTGGGGA AGGCTACTGGGCATCCTCATCCCCTGCAGGGCCTTTGGGGA < 41bp 1 0.365366212424319 1 0.828943014144897 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919216 chr16:66919208 nonsynonymous SNV 0.973 0 13 hm5C_associated_SNPs_19902 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:66919198-66919221
64251 chr3 127323812 127323812 1 + G A COAD 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GAGCGGGCCACGGAGGACGGCGAAGAGGACGAGGAGATGAT < 41bp 1 0.423156401872171 1 0.528241515159607 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323812 synonymous SNV . 0 24 hm5C_associated_SNPs_19903 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:127323780-127323840
64251 chr14 24900805 24900805 1 + C A COAD 24900790 + 24900770 24900810 41 CTGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGG CTGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCACAGGG < 41bp 1 0.443860055139674 1 0.327360272407532 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KHNYN ENSG00000100441 CDS Human protein_coding chr14:24900790 chr14:24900805 nonsynonymous SNV 0.575 4 36 hm5C_associated_SNPs_19904 0 0 5 GRSF1 POSTAR2 ENCODE chr14:24900769-24900806
64251 chr11 120352054 120352054 1 + C A COAD 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCAATGACAGGCATCCCTGCTGTGGAATCCACCCACC < 41bp 1 0.663152699340942 1 0.145150929689407 experiment 0.673694601318117 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352054 synonymous SNV . 0 7 hm5C_associated_SNPs_19907 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:120352031-120352083
64251 chr16 30736394 30736394 1 + T C COAD 30736401 + 30736381 30736421 41 CACCTCGTTCCCCTTTTTATCTGGTAAGTTTTACTTCCTCA CACCTCGTTCCCCCTTTTATCTGGTAAGTTTTACTTCCTCA < 41bp 1 0.398818731919249 1 0.242666363716125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30736401 chr16:30736394 synonymous SNV . 0 14 hm5C_associated_SNPs_19909 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:30736343-30736404
64251 chr11 64112524 64112524 1 + C A COAD 64112516 + 64112496 64112536 41 GGGAGCGTGAGGGGTCCAGGCTGCGGGCCCAGTCGGAGGCC GGGAGCGTGAGGGGTCCAGGCTGCGGGCACAGTCGGAGGCC < 41bp 1 0.730511268630252 1 0.561738252639771 experiment 0.538977462739495 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64112516 chr11:64112524 synonymous SNV . 0 29 hm5C_associated_SNPs_19910 0 0 5 BUD13 POSTAR2 ENCODE chr11:64112498-64112539
64251 chr1 156705648 156705648 1 + C T COAD 156705645 + 156705625 156705665 41 CAGCCTGGCTCTACTGCTTGCCCCACTGGTGGAGACGCTTA CAGCCTGGCTCTACTGCTTGCCCTACTGGTGGAGACGCTTA < 41bp 1 0.256842294301012 1 0.0475841164588928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156705645 chr1:156705648 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_19911 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:156705635-156705662
64251 chr10 71154812 71154812 1 + C A COAD 71154804 + 71154784 71154824 41 CCTCTTCCGAGGGCAGATCTCTGAGACGCTGAAGACCCGGG CCTCTTCCGAGGGCAGATCTCTGAGACGATGAAGACCCGGG < 41bp 1 0.709310492838712 1 0.737887024879456 experiment 0.581379014322577 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71154804 chr10:71154812 nonsynonymous SNV 0.998 5 29 hm5C_associated_SNPs_19913 0 0 2 FXR2 POSTAR2 ENCODE chr10:71154793-71154828
64251 chr5 118861658 118861658 1 + T G COAD 118861674 + 118861654 118861694 41 TTTCTGCCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT TTTCGGCCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT < 41bp 1 0.799244735969092 1 0.0969680845737457 experiment 0.401510528061816 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118861674 chr5:118861658 synonymous SNV . 0 5 hm5C_associated_SNPs_19914 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118861639-118861687
64251 chr19 50755952 50755952 1 + C T COAD 50755957 + 50755937 50755977 41 CCCTCTGAATGACAACGTCGCAGCCTTGCTCCACCAGAGCA CCCTCTGAATGACAATGTCGCAGCCTTGCTCCACCAGAGCA < 41bp 1 0.168500246739467 1 0.314361363649368 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50755957 chr19:50755952 synonymous SNV . 0 16 hm5C_associated_SNPs_19915 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr19:50755947-50755973
64251 chr5 176524306 176524306 1 + C T COAD 176524296 + 176524276 176524316 41 CGCCCCACCTCTCGCAGGTACGGGCTGATGCGTGAGTGCTG CGCCCCACCTCTCGCAGGTACGGGCTGATGTGTGAGTGCTG < 41bp 1 0.487084354410108 1 0.527297735214233 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524296 chr5:176524306 nonsynonymous SNV 0.917 5 31 hm5C_associated_SNPs_19919 0 0 2 RPS3 POSTAR2 ENCODE chr5:176524292-176524352
64251 chr4 44680642 44680642 1 + G A COAD 44680627 + 44680607 44680647 41 GTACCCTCTCCTGACGCCTCCGCCGCCCGGGTCATGTGGAC GTACCCTCTCCTGACGCCTCCGCCGCCCGGGTCATATGGAC < 41bp 1 0.630144836601662 1 0.579216003417969 experiment 0.739710326796675 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GUF1 ENSG00000151806 CDS Human protein_coding chr4:44680627 chr4:44680642 nonsynonymous SNV 0.040 1 36 hm5C_associated_SNPs_19920 0 0 3 DDX3X POSTAR2 ENCODE chr4:44680632-44680689
64251 chr1 33745911 33745911 1 + T A COAD 33745921 + 33745901 33745941 41 ATCAAGACAATCCAGGGCCACGGCCTGCTTGGCCCCCCCAA ATCAAGACAAACCAGGGCCACGGCCTGCTTGGCCCCCCCAA < 41bp 1 0.492887476644993 1 0.620055615901947 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33745921 chr1:33745911 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_19921 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:33745906-33745930
64251 chr21 45534104 45534104 1 + C T COAD 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGTACCACTTCCACTTCAAGGGCTCTGTGCACAG < 41bp 1 0.757219967683839 1 0.471945226192474 experiment 0.485560064632322 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534104 nonsynonymous SNV 0.987 3 10 hm5C_associated_SNPs_19922 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45534090-45534113
64251 chr11 66411264 66411264 1 + G A COAD 66411252 + 66411232 66411272 41 TATAATTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT TATAATTACGCAGAGCAGACCCTGTCCCAGCTACCACAAGT < 41bp 1 0.0493984501318911 1 0.0317440032958984 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411252 chr11:66411264 synonymous SNV . 0 33 hm5C_associated_SNPs_19923 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:66411235-66411268
64251 chr16 67006804 67006804 1 + C T COAD 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTCAACCAGGTGGAACAATATCTGGAGATCAACCCA < 41bp 1 0.292985023339967 1 0.391093730926514 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006804 nonsynonymous SNV 0.000 0 16 hm5C_associated_SNPs_19924 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chrX 41025392 41025392 1 + A C COAD 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGACGGAA < 41bp 1 0.159404276531296 1 0.0600881576538086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025392 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_19925 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chr9 124535539 124535539 1 + C T COAD 124535558 + 124535538 124535578 41 GCTGGCCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC GTTGGCCCCCAGAGGAGGATCGACCAGCCTCCGCCCCCACC < 41bp 1 0.324562766300023 1 0.127650767564774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535558 chr9:124535539 nonsynonymous SNV 0.987 3 2 hm5C_associated_SNPs_19927 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:124535522-124535548
64251 chr10 102762419 102762419 1 + C G COAD 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCCGGGGGGGCAGCTCCTCCCCGCCACCACG < 41bp 1 0.320390510004996 1 0.395991325378418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762419 nonsynonymous SNV 0.816 0 20 hm5C_associated_SNPs_19928 0 0 5 DDX24 POSTAR2 ENCODE chr10:102762228-102762472
64251 chr9 100773658 100773658 1 + A G COAD 100773650 + 100773630 100773670 41 GATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGA GATGTAGAAGGGGATGAGGACGACGATGGAGTCAGTGAGGA < 41bp 1 0.717407773079644 1 0.611680269241333 experiment 0.565184453840712 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773650 chr9:100773658 nonsynonymous SNV 0.807 3 29 hm5C_associated_SNPs_19934 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773658 100773658 1 + A G COAD 100773653 + 100773633 100773673 41 GTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT GTAGAAGGGGATGAGGACGACGATGGAGTCAGTGAGGAGGT < 41bp 1 0.533156427638524 1 0.436489820480347 experiment 0.933687144722951 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773653 chr9:100773658 nonsynonymous SNV 0.807 3 26 hm5C_associated_SNPs_19935 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773658 100773658 1 + A G COAD 100773662 + 100773642 100773682 41 GATGAGGACGACGATGAAGTCAGTGAGGAGGTCAGTGCAGC GATGAGGACGACGATGGAGTCAGTGAGGAGGTCAGTGCAGC < 41bp 1 0.640920649539254 1 0.58675342798233 experiment 0.718158700921491 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773662 chr9:100773658 nonsynonymous SNV 0.807 3 17 hm5C_associated_SNPs_19936 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr17 7467090 7467090 1 + C T COAD 7467100 + 7467080 7467120 41 TCCAAAGTCTCCTCTGGACCCTGACTCGGGTAAGGTGGGAA TCCAAAGTCTTCTCTGGACCCTGACTCGGGTAAGGTGGGAA < 41bp 1 0.384382681973676 1 0.0897980332374573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SENP3 ENSG00000161956 CDS Human protein_coding chr17:7467100 chr17:7467090 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_19938 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7467054-7467092
64251 chr2 197541360 197541360 1 + C T COAD 197541357 + 197541337 197541377 41 GAACAGCTGTGCAAAAAGAGCTGCTAGAATCAACTATTGCA GAACAGCTGTGCAAAAAGAGCTGTTAGAATCAACTATTGCA < 41bp 1 0.136921294804079 1 0.0728147923946381 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197541357 chr2:197541360 synonymous SNV . 0 24 hm5C_associated_SNPs_19940 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr2:197541352-197541395
64251 chr10 103900021 103900021 1 + C T COAD 103900017 + 103899997 103900037 41 GACTCTGCCCAAGCCAGCCCCATGCCAGTTGACTCTGTTGA GACTCTGCCCAAGCCAGCCCCATGTCAGTTGACTCTGTTGA < 41bp 1 0.123837906466784 1 0.256697654724121 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900017 chr10:103900021 nonsynonymous SNV 0.061 1 25 hm5C_associated_SNPs_19942 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:103899982-103900032
64251 chr16 85682273 85682273 1 + C T COAD 85682293 + 85682273 85682313 41 CCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATCGCTC TCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATCGCTC < 41bp 1 0.165704730924878 1 0.071210116147995 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85682293 chr16:85682273 synonymous SNV . 0 1 hm5C_associated_SNPs_19944 0 0 5 DDX6 POSTAR2 ENCODE chr16:85682145-85682295
64251 chr2 113953763 113953763 1 + G A COAD 113953757 + 113953737 113953777 41 ACAGCCAGACCTGAGAAGGCCCAGCCGTCCCTGCCAGCTGG ACAGCCAGACCTGAGAAGGCCCAGCCATCCCTGCCAGCTGG < 41bp 1 0.111749205229063 1 0.0814476609230042 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSD4 ENSG00000125637 CDS Human protein_coding chr2:113953757 chr2:113953763 synonymous SNV . 0 27 hm5C_associated_SNPs_19945 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831623 chr2:113953760-113953780
64251 chr15 91312368 91312368 1 + T A COAD 91312388 + 91312368 91312408 41 TGCAAGTAACAGACTCATTTCTACTCTGGAGAATCTCTATG AGCAAGTAACAGACTCATTTCTACTCTGGAGAATCTCTATG < 41bp 1 0.36232804035525 1 0.0507834255695343 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91312388 chr15:91312368 stopgain 0.999 1 1 hm5C_associated_SNPs_19948 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:91312338-91312370
64251 chrX 49031025 49031025 1 + C T COAD 49031034 + 49031014 49031054 41 CCTGCAGACCCCGCAGATGGCCCGGTGTAGGCGAACTTCCC CCTGCAGACCCTGCAGATGGCCCGGTGTAGGCGAACTTCCC < 41bp 1 0.524200758965498 1 0.145536541938782 experiment 0.951598482069005 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLP2 ENSG00000102007 CDS Human protein_coding chrX:49031034 chrX:49031025 synonymous SNV . 0 12 hm5C_associated_SNPs_19950 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49031020-49031060
64251 chrX 107911660 107911660 1 + C T COAD 107911644 + 107911624 107911664 41 TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCT TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCTTCCT < 41bp 1 0.792884865108325 1 0.83343780040741 experiment 0.414230269783349 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107911644 chrX:107911660 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_19952 0 0 3 RPS3 POSTAR2 ENCODE chrX:107911625-107911683
64251 chr9 133511424 133511424 1 + C T COAD 133511425 + 133511405 133511445 41 TCCTCAGGCCAGCTCCCCACCGGACTACACAATGGCCTGGG TCCTCAGGCCAGCTCCCCATCGGACTACACAATGGCCTGGG < 41bp 1 0.764202136789308 1 0.879482448101044 experiment 0.471595726421384 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133511425 chr9:133511424 nonsynonymous SNV 0.971 3 20 hm5C_associated_SNPs_19953 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:133511420-133511440
64251 chr4 57881723 57881723 1 + G A COAD 57881714 + 57881694 57881734 41 GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTA GAGGGAGATTCGGATCTATACGGATGCAGACCGTATTTGTA < 41bp 1 0.612762259552058 1 0.6893430352211 experiment 0.774475480895884 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57881714 chr4:57881723 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_19954 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57881674-57881738
64251 chr5 52204801 52204801 1 + T C COAD 52204817 + 52204797 52204837 41 CTAGTCGGAGCCCCTATGTACATGGGAACAGAGAAGGAGGA CTAGCCGGAGCCCCTATGTACATGGGAACAGAGAAGGAGGA < 41bp 1 0.361471554266018 1 0.441655337810516 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ITGA1 ENSG00000213949 CDS Human protein_coding chr5:52204817 chr5:52204801 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_19955 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:52204800-52204820
64251 chr12 67699434 67699434 1 + C A COAD 67699418 + 67699398 67699438 41 AGGGGTTCCTATCCTTGCTTCATTTCTTAGAAAAAACCAGA AGGGGTTCCTATCCTTGCTTCATTTCTTAGAAAAAAACAGA < 41bp 1 0.0277090129547495 1 0.0756645798683167 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699418 chr12:67699434 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_19957 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:67699418-67699450
64251 chr9 33917140 33917140 1 + G A COAD 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAACAGCTCAGATTTGCTTTACAACGACT < 41bp 1 0.23033070299974 1 0.14328333735466 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917140 nonsynonymous SNV 0.999 3 35 hm5C_associated_SNPs_19958 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917140 33917140 1 + G A COAD 33917142 + 33917122 33917162 41 AGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT AGCTCAGATTTGCTTTACAACGACTTGTATGATGACGACAT < 41bp 1 0.382444215613609 1 0.0456437468528748 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917142 chr9:33917140 nonsynonymous SNV 0.999 3 19 hm5C_associated_SNPs_19959 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917140 33917140 1 + G A COAD 33917145 + 33917125 33917165 41 TCAGATTTGCTTTACGACGACTTGTATGATGACGACATTGA TCAGATTTGCTTTACAACGACTTGTATGATGACGACATTGA < 41bp 1 0.16107847098246 1 0.0508410036563873 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917145 chr9:33917140 nonsynonymous SNV 0.999 3 16 hm5C_associated_SNPs_19960 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917140 33917140 1 + G A COAD 33917160 + 33917140 33917180 41 GACGACTTGTATGATGACGACATTGATGATGAAGATGAGGA AACGACTTGTATGATGACGACATTGATGATGAAGATGAGGA < 41bp 1 0.0670888269326471 1 0.11705219745636 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917160 chr9:33917140 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_19961 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr3 47040856 47040856 1 + C T COAD 47040844 + 47040824 47040864 41 AGAATGAGCGGCTACCTGAGCGGAGCCGCCAGCGCCTCCGG AGAATGAGCGGCTACCTGAGCGGAGCCGCCAGTGCCTCCGG < 41bp 1 0.569731947904992 1 0.895214796066284 experiment 0.860536104190016 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47040844 chr3:47040856 nonsynonymous SNV 0.728 4 33 hm5C_associated_SNPs_19964 0 0 1 NOL12 POSTAR2 ENCODE chr3:47040800-47040893
64251 chr3 127786412 127786412 1 + T C COAD 127786410 + 127786390 127786430 41 ATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATTGA ATGCTGGGCTCCTGTGCATTCTCCTCCAAAACGTGGATTGA < 41bp 1 0.546891646401759 1 0.60553777217865 experiment 0.906216707196481 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786410 chr3:127786412 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_19967 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:127786373-127786445
64251 chrX 135593892 135593892 1 + C T COAD 135593877 + 135593857 135593897 41 AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAG AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGTGGAAG < 41bp 1 0.665967996601012 1 0.158446103334427 experiment 0.668064006797976 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593877 chrX:135593892 nonsynonymous SNV 0.517 1 36 hm5C_associated_SNPs_19968 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chrX 135593892 135593892 1 + C T COAD 135593880 + 135593860 135593900 41 TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAG TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGTGGAAGAAG < 41bp 1 0.286658672541049 1 0.153389781713486 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593880 chrX:135593892 nonsynonymous SNV 0.517 1 33 hm5C_associated_SNPs_19969 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr14 105177433 105177433 1 + C T COAD 105177427 + 105177407 105177447 41 CCCTCCCAGGGCAGCCACACCGGTGACGCCGACGGCTTCAA CCCTCCCAGGGCAGCCACACCGGTGATGCCGACGGCTTCAA < 41bp 1 0.530847043424777 1 0.48493629693985 experiment 0.938305913150445 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105177427 chr14:105177433 synonymous SNV . 0 27 hm5C_associated_SNPs_19970 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105177424-105177446
64251 chr10 93605608 93605608 1 + C T COAD 93605612 + 93605592 93605632 41 AGCAGCCCAAAAGGGACGAACACAGCTTTGTGCTTTGTTGC AGCAGCCCAAAAGGGATGAACACAGCTTTGTGCTTTGTTGC < 41bp 1 0.442119271456137 1 0.355812549591064 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93605612 chr10:93605608 stopgain 1.000 1 17 hm5C_associated_SNPs_19972 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:93605602-93605640
64251 chr9 6498129 6498129 1 + C T COAD 6498113 + 6498093 6498133 41 GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTC GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAATGGTC < 41bp 1 0.361350553728597 1 0.149571895599365 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498113 chr9:6498129 nonsynonymous SNV 0.988 5 37 hm5C_associated_SNPs_19973 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr9 6498129 6498129 1 + C T COAD 6498115 + 6498095 6498135 41 TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTCAA TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAATGGTCAA < 41bp 1 0.715730504204079 1 0.720943987369537 experiment 0.568538991591842 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498115 chr9:6498129 nonsynonymous SNV 0.988 5 35 hm5C_associated_SNPs_19974 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr19 18254666 18254666 1 + C A COAD 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC CAGCCCATCTCTCCTGAATACCATCAGACTGGACACAATGC < 41bp 1 0.0130115307366319 1 0.0196704864501953 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254666 nonsynonymous SNV 0.027 1 28 hm5C_associated_SNPs_19975 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:18254654-18254676
64251 chr14 72152247 72152247 1 + G A COAD 72152244 + 72152224 72152264 41 CAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA CAGGTGCAGAGTCCCATGACCTCACGGCTGAATGCTGGAAA < 41bp 1 0.247230352946394 1 0.0491222441196442 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152244 chr14:72152247 synonymous SNV . 0 24 hm5C_associated_SNPs_19977 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr14 72152247 72152247 1 + G A COAD 72152246 + 72152226 72152266 41 GGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAAAG GGTGCAGAGTCCCATGACCTCACGGCTGAATGCTGGAAAAG < 41bp 1 0.792612902049074 1 0.493502765893936 experiment 0.414774195901852 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152246 chr14:72152247 synonymous SNV . 0 22 hm5C_associated_SNPs_19978 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr17 57771129 57771129 1 + C T COAD 57771132 + 57771112 57771152 41 GCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGG GCAGGACCCAGTGTTGCTGTCCCTCCCCAGGCACCTTTTGG < 41bp 1 0.0499405840927334 1 0.111594915390015 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57771132 chr17:57771129 synonymous SNV . 0 18 hm5C_associated_SNPs_19979 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:57771099-57771134
64251 chr5 33466994 33466994 1 + G A COAD 33466993 + 33466973 33467013 41 TAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA TAGGTACGACAACAATTCCACAATGCCAAATTCATGGCAGA < 41bp 1 0.136054061231353 1 0.0644717514514923 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33466993 chr5:33466994 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_19985 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33466955-33467001
64251 chr16 67575938 67575938 1 + C T COAD 67575945 + 67575925 67575965 41 CCAAGTTGCCTTCCGCAGGCCTGAGACCCCCAGCTCTGGGC CCAAGTTGCCTTCTGCAGGCCTGAGACCCCCAGCTCTGGGC < 41bp 1 0.490613999624236 1 0.0882602334022522 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575945 chr16:67575938 nonsynonymous SNV 0.939 0 14 hm5C_associated_SNPs_19987 0 0 1 FXR2 POSTAR2 ENCODE chr16:67575929-67575989
64251 chr3 10320692 10320692 1 + C T COAD 10320677 + 10320657 10320697 41 CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTTGCCTC < 41bp 1 0.718923611277298 1 0.794757485389709 experiment 0.562152777445404 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320677 chr3:10320692 nonsynonymous SNV 0.998 3 36 hm5C_associated_SNPs_19988 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr3 10320692 10320692 1 + C T COAD 10320688 + 10320668 10320708 41 GCTGCCTTGCGTGAGAACACCAGTCGCCTCTACAGTCTTTA GCTGCCTTGCGTGAGAACACCAGTTGCCTCTACAGTCTTTA < 41bp 1 0.244116505915154 1 0.0887820422649384 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320688 chr3:10320692 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_19989 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr2 224824277 224824277 1 + A G COAD 224824275 + 224824255 224824295 41 GAGAAGCCGAACTGGGATTACCATGCAGAAATACAAGCTTT GAGAAGCCGAACTGGGATTACCGTGCAGAAATACAAGCTTT < 41bp 1 0.241934431678783 1 0.254765152931213 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824275 chr2:224824277 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_19990 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:224824257-224824280
64251 chr3 9515070 9515070 1 + C T COAD 9515077 + 9515057 9515097 41 TGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTT TGCCCATGGTGTGTAGGGATCCTCAGCCCGAACTCCATCTT < 41bp 1 0.320117761163839 1 0.0334777235984802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515077 chr3:9515070 stopgain 1.000 0 14 hm5C_associated_SNPs_19991 0 0 8 U2AF2 POSTAR2 GSE83923,CSM2221662 chr3:9515060-9515080
64251 chr19 52195901 52195901 1 + G A COAD 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCAC < 41bp 1 0.301558310792424 1 0.106055915355682 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195882 chr19:52195901 . . 0 40 hm5C_associated_SNPs_19992 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195901 52195901 1 + G A COAD 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCACC < 41bp 1 0.403515878987051 1 0.19163390994072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195883 chr19:52195901 . . 0 39 hm5C_associated_SNPs_19993 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195901 52195901 1 + G A COAD 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCACCGCA < 41bp 1 0.0912208567492348 1 0.0221984386444092 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195901 . . 0 36 hm5C_associated_SNPs_19994 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195901 52195901 1 + G A COAD 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCACCGCAC < 41bp 1 0.364640529908363 1 0.138026893138885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195901 . . 0 35 hm5C_associated_SNPs_19995 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr13 20567794 20567794 1 + A G COAD 20567812 + 20567792 20567832 41 GTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGG GTGAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGG < 41bp 1 0.0828391463963607 1 0.250976622104645 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567812 chr13:20567794 synonymous SNV . 0 3 hm5C_associated_SNPs_19996 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567794 20567794 1 + A G COAD 20567813 + 20567793 20567833 41 TAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGG TGAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGG < 41bp 1 0.0806097167483489 1 0.203718513250351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567813 chr13:20567794 synonymous SNV . 0 2 hm5C_associated_SNPs_19997 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr14 102476255 102476255 1 + T C COAD 102476275 + 102476255 102476295 41 TGAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC CGAACCCTGGCTACGCGGGCCGGTCTAACCTTCCTGACAAC < 41bp 1 0.0417893825950733 1 0.379304647445679 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102476275 chr14:102476255 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_19998 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102476193-102476327
64251 chrX 69353957 69353957 1 + G A COAD 69353952 + 69353932 69353972 41 CTTGGACCTCCTTGAGAAGGCTGCCGAAATGTTATCGCAGC CTTGGACCTCCTTGAGAAGGCTGCCAAAATGTTATCGCAGC < 41bp 1 0.405651149393795 1 0.186804354190826 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353952 chrX:69353957 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_19999 0 0 1 TROVE2 POSTAR2 ENCODE chrX:69353920-69353960
64251 chrX 69353957 69353957 1 + G A COAD 69353956 + 69353936 69353976 41 GACCTCCTTGAGAAGGCTGCCGAAATGTTATCGCAGCTCGA GACCTCCTTGAGAAGGCTGCCAAAATGTTATCGCAGCTCGA < 41bp 1 0.472984460855502 1 0.638658225536346 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353956 chrX:69353957 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_20000 0 0 1 TROVE2 POSTAR2 ENCODE chrX:69353920-69353960
64251 chrX 69353957 69353957 1 + G A COAD 69353969 + 69353949 69353989 41 AGGCTGCCGAAATGTTATCGCAGCTCGACTTGTTCAGGTAT AGGCTGCCAAAATGTTATCGCAGCTCGACTTGTTCAGGTAT < 41bp 1 0.301271798320144 1 0.731661677360535 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353969 chrX:69353957 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_20001 0 0 1 TROVE2 POSTAR2 ENCODE chrX:69353920-69353960
64251 chr19 36594101 36594101 1 + G A COAD 36594096 + 36594076 36594116 41 GCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACGTGAGTG GCTGAAGAGACCCTGGAGGCCTGGCACCCACCACGTGAGTG < 41bp 1 0.418180241328286 1 0.127460151910782 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36594096 chr19:36594101 nonsynonymous SNV 0.001 0 26 hm5C_associated_SNPs_20011 0 0 1 SF3B4 POSTAR2 ENCODE chr19:36594058-36594109
64251 chr1 39823345 39823345 1 + G A COAD 39823346 + 39823326 39823366 41 AACATGCATAAGGGAGGCAGCAGCCCCGAGACCCTTCCCTC AACATGCATAAGGGAGGCAACAGCCCCGAGACCCTTCCCTC < 41bp 1 0.168411749884122 1 0.253716140985489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39823346 chr1:39823345 nonsynonymous SNV 0.768 1 20 hm5C_associated_SNPs_20015 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:39823326-39823347
64251 chr3 40499433 40499433 1 + C A COAD 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGCCGGGTGGCCTATGTCTCCTTTGGACATCATGCCGGAAA < 41bp 1 0.407076707270807 1 0.0434713363647461 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499433 nonsynonymous SNV 0.995 3 29 hm5C_associated_SNPs_20016 0 0 2 SUB1 POSTAR2 ENCODE chr3:40499432-40499483
64251 chr6 155154288 155154288 1 + A G COAD 155154268 + 155154248 155154288 41 GGACGAGACAGAATTCAAAACACTTGGGTTCCCCCTCCTCA GGACGAGACAGAATTCAAAACACTTGGGTTCCCCCTCCTCG < 41bp 1 0.187638469147315 1 0.129660040140152 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155154268 chr6:155154288 nonsynonymous SNV 0.998 1 41 hm5C_associated_SNPs_20017 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:155154258-155154288
64251 chr9 79996932 79996932 1 + C T COAD 79996920 + 79996900 79996940 41 AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTC AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTTGGTTCTTC < 41bp 1 0.438889797791884 1 0.324905395507812 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS13A ENSG00000197969 CDS Human protein_coding chr9:79996920 chr9:79996932 nonsynonymous SNV 0.991 4 33 hm5C_associated_SNPs_20018 0 0 1 EIF3H POSTAR2 ENCODE chr9:79996893-79996995
64251 chr3 66431205 66431205 1 - G A COAD 66431223 - 66431203 66431243 41 TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGTCT < 41bp 1 0.197798243224544 1 0.137196272611618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431223 chr3:66431205 nonsynonymous SNV 0.750 0 39 hm5C_associated_SNPs_20019 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:66431194-66431217
64251 chr6 42974732 42974732 1 + C T COAD 42974749 + 42974729 42974769 41 CCACTCAGTGACCTCAAATTCAAGGAGGTGAAGCGGGCAGG CCATTCAGTGACCTCAAATTCAAGGAGGTGAAGCGGGCAGG < 41bp 1 0.758891782832681 1 0.741716265678406 experiment 0.482216434334638 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974749 chr6:42974732 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_20020 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:42974707-42974736
64251 chr5 176721107 176721107 1 + G T COAD 176721103 + 176721083 176721123 41 GCAATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTCAG GCAATCAACAGGAATGGCTGCTCATGCACCCAAAATGTCAG < 41bp 1 0.0928946694100544 1 0.0516745448112488 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721103 chr5:176721107 nonsynonymous SNV 0.971 3 25 hm5C_associated_SNPs_20021 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176721083-176721113
64251 chr9 133760743 133760743 1 + C T COAD 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATTGCCAGC < 41bp 1 0.0123804574779695 1 0.137393653392792 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760743 synonymous SNV . 0 35 hm5C_associated_SNPs_20022 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr9:133760742-133760743
64251 chr1 8030968 8030968 1 + G T COAD 8030955 + 8030935 8030975 41 TTGGTTTTCTTTTCACTAGTCTGCTGCTGTGAAGGAGATAC TTGGTTTTCTTTTCACTAGTCTGCTGCTGTGAATGAGATAC < 41bp 1 0.356485133773992 1 0.31263941526413 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PARK7 ENSG00000116288 CDS Human protein_coding chr1:8030955 chr1:8030968 nonsynonymous SNV 0.937 2 34 hm5C_associated_SNPs_20023 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:8030951-8030972
64251 chr1 8030968 8030968 1 + G T COAD 8030961 + 8030941 8030981 41 TTCTTTTCACTAGTCTGCTGCTGTGAAGGAGATACTGAAGG TTCTTTTCACTAGTCTGCTGCTGTGAATGAGATACTGAAGG < 41bp 1 0.172802364569385 1 0.399786442518234 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PARK7 ENSG00000116288 CDS Human protein_coding chr1:8030961 chr1:8030968 nonsynonymous SNV 0.937 2 28 hm5C_associated_SNPs_20024 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:8030951-8030972
64251 chr1 33237297 33237297 1 + G A COAD 33237305 + 33237285 33237325 41 TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC TCCTCCAGCTCCACCAGCCCCAGCTCCTGCTAGTTCCGCCC < 41bp 1 0.284153886502045 1 0.296270787715912 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237305 chr1:33237297 synonymous SNV . 0 13 hm5C_associated_SNPs_20027 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486177 chr1:33237296-33237297
64251 chr11 985555 985555 1 + C T COAD 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCGAAGAATGCCGTGCTCTTCGAGGTCATCAGCTTA < 41bp 1 0.0455028880690693 1 0.05155149102211 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985555 nonsynonymous SNV 0.966 3 31 hm5C_associated_SNPs_20028 0 0 4 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr3 184106414 184106414 1 + A G COAD 184106407 + 184106387 184106427 41 CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC CCCACCCCCAGCTGGGGGACCCCATGCGGGCTGATGGGCCC < 41bp 1 0.216934628234135 1 0.242753475904465 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184106407 chr3:184106414 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_20029 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:184106409-184106439
64251 chr1 168014205 168014205 1 + T C COAD 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TCGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT < 41bp 1 0.423883156094655 1 0.493910104036331 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014205 synonymous SNV . 0 2 hm5C_associated_SNPs_20030 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:168014200-168014220
64251 chr1 16785439 16785439 1 + G A COAD 16785430 + 16785410 16785450 41 GACTTCTGGGAAGGCGCTCCCTCATCTGGGCCAAAGGAAGG GACTTCTGGGAAGGCGCTCCCTCATCTGGACCAAAGGAAGG < 41bp 1 0.551126695369648 1 0.116056144237518 experiment 0.897746609260704 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16785430 chr1:16785439 nonsynonymous SNV 0.152 1 30 hm5C_associated_SNPs_20031 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:16785425-16785463
64251 chr15 93496702 93496702 1 + G A COAD 93496712 + 93496692 93496732 41 TCTTATAGTCGTCCCTTTATCCACCCTCACCTCATGGCAGA TCTTATAGTCATCCCTTTATCCACCCTCACCTCATGGCAGA < 41bp 1 0.184296298709418 1 0.703047275543213 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93496712 chr15:93496702 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_20032 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:93496680-93496702
64251 chr9 135947053 135947053 1 + G C COAD 135947033 + 135947013 135947053 41 CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGG CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGC < 41bp 1 0.507094890375413 1 0.266351729631424 experiment 0.985810219249173 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947033 chr9:135947053 nonsynonymous SNV 0.001 1 41 hm5C_associated_SNPs_20033 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947053 135947053 1 + G C COAD 135947035 + 135947015 135947055 41 CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCC CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGCCC < 41bp 1 0.309110809421368 1 0.0982445478439331 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947035 chr9:135947053 nonsynonymous SNV 0.001 1 39 hm5C_associated_SNPs_20034 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947053 135947053 1 + G C COAD 135947036 + 135947016 135947056 41 CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCCC CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGCCCC < 41bp 1 0.544214676513317 1 0.177856653928757 experiment 0.911570646973366 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947036 chr9:135947053 nonsynonymous SNV 0.001 1 38 hm5C_associated_SNPs_20035 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947053 135947053 1 + G C COAD 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGCCCCCCCCTGTGCC < 41bp 1 0.695486293621079 1 0.636552393436432 experiment 0.609027412757843 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947053 nonsynonymous SNV 0.001 1 28 hm5C_associated_SNPs_20036 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr5 154173700 154173700 1 + T C COAD 154173686 + 154173666 154173706 41 TTGACTACCAGTTTGGCTACCGAAAGTTTGATGGTGTGGAG TTGACTACCAGTTTGGCTACCGAAAGTTTGATGGCGTGGAG < 41bp 1 0.601695208774468 1 0.727991104125977 experiment 0.796609582451065 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154173686 chr5:154173700 synonymous SNV . 0 35 hm5C_associated_SNPs_20037 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154173667-154173711
64251 chr1 145115793 145115793 1 + G A COAD 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCAAAGTACTTGAACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0446615942081931 1 0.0670027732849121 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115793 . . 0 5 hm5C_associated_SNPs_20038 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:145115746-145115795
64251 chrX 149905124 149905124 1 + T C COAD 149905115 + 149905095 149905135 41 GTGCTTACCCAAATGCAGAACTTGTGTTCTTGGAGATCCAC GTGCTTACCCAAATGCAGAACTTGTGTTCCTGGAGATCCAC < 41bp 1 0.173912092264073 1 0.0315197706222534 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905115 chrX:149905124 synonymous SNV . 0 30 hm5C_associated_SNPs_20039 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:149905104-149905139
64251 chr2 177015088 177015088 1 + G A COAD 177015069 + 177015049 177015089 41 TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGT TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCAT < 41bp 1 0.653794314727048 1 0.0510607063770294 experiment 0.692411370545905 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015069 chr2:177015088 . . 0 40 hm5C_associated_SNPs_20049 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr2 177015088 177015088 1 + G A COAD 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCATA < 41bp 1 0.390672250016201 1 0.0624404549598694 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015088 . . 0 39 hm5C_associated_SNPs_20050 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr2 182785345 182785345 1 + G A COAD 182785364 + 182785344 182785384 41 CGCTGATAACTTGTCATGCCCTTCTCCATTGAATGTAATGG CACTGATAACTTGTCATGCCCTTCTCCATTGAATGTAATGG < 41bp 1 0.0492740376875939 1 0.0385544300079346 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182785364 chr2:182785345 nonsynonymous SNV 0.997 0 2 hm5C_associated_SNPs_20051 0 0 5 BUD13 POSTAR2 ENCODE chr2:182785316-182785351
64251 chr1 27088723 27088723 1 + G T COAD 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCCGCGTCAGCCTTCCTGAGGACAGATA < 41bp 1 0.210650613557823 1 0.0427128672599792 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088723 stopgain 0.968 1 30 hm5C_associated_SNPs_20052 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:27088703-27088724
64251 chrX 21995188 21995188 1 + C T COAD 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCTATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA < 41bp 1 0.158922938720189 1 0.402995020151138 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995188 synonymous SNV . 0 4 hm5C_associated_SNPs_20053 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:21995180-21995200
64251 chr14 105352959 105352959 1 + G A COAD 105352950 + 105352930 105352970 41 CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCTTC CACCAAGGGCCCCCGGGGAGCCAACTCCCACCTCTTTCTTC < 41bp 1 0.0503775425526721 1 0.0424256026744843 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105352950 chr14:105352959 nonsynonymous SNV 0.002 0 30 hm5C_associated_SNPs_20055 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:105352949-105352973
64251 chr19 50334643 50334643 1 + A T COAD 50334624 + 50334604 50334644 41 CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAG CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGTG < 41bp 1 0.236219044138439 1 0.113843023777008 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334624 chr19:50334643 synonymous SNV . 0 40 hm5C_associated_SNPs_20056 0 0 3 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr19 50334643 50334643 1 + A T COAD 50334629 + 50334609 50334649 41 GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGTGCCCCA < 41bp 1 0.509457399717331 1 0.482234239578247 experiment 0.981085200565339 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334629 chr19:50334643 synonymous SNV . 0 35 hm5C_associated_SNPs_20057 0 0 3 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr2 181927532 181927532 1 + G A COAD 181927542 + 181927522 181927562 41 TCCTCTGGTTGGAAGCATAGCCACTCAGTATTTGACCAACA TCCTCTGGTTAGAAGCATAGCCACTCAGTATTTGACCAACA < 41bp 1 0.110717410972083 1 0.0249004662036896 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2E3 ENSG00000170035 CDS Human protein_coding chr2:181927542 chr2:181927532 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_20058 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:181927517-181927550
64251 chr2 233697641 233697641 1 + G A COAD 233697652 + 233697632 233697672 41 GCTGCGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGG GCTGCGGATAGAAGAGGAGGCAGCCAGACTCCGGCATGAGG < 41bp 1 0.257103495264247 1 0.218017518520355 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233697652 chr2:233697641 nonsynonymous SNV 0.997 2 10 hm5C_associated_SNPs_20060 0 0 28 AGGF1 POSTAR2 ENCODE chr2:233697618-233697682
64251 chr2 233697641 233697641 1 + G A COAD 233697656 + 233697636 233697676 41 CGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGGAAGA CGGATAGAAGAGGAGGCAGCCAGACTCCGGCATGAGGAAGA < 41bp 1 0.30702568023745 1 0.320342749357224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233697656 chr2:233697641 nonsynonymous SNV 0.997 2 6 hm5C_associated_SNPs_20061 0 0 28 AGGF1 POSTAR2 ENCODE chr2:233697618-233697682
64251 chr2 214149285 214149285 1 + C T COAD 214149300 + 214149280 214149320 41 GCAGCCGGGGACGCGAGGGACACGGCGGACGCGGTGGCGGC GCAGCTGGGGACGCGAGGGACACGGCGGACGCGGTGGCGGC < 41bp 1 0.737854482801113 1 0.495069354772568 experiment 0.524291034397774 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPAG16 ENSG00000144451 CDS Human protein_coding chr2:214149300 chr2:214149285 synonymous SNV . 0 6 hm5C_associated_SNPs_20062 0 0 7 EFTUD2 POSTAR2 ENCODE chr2:214149179-214149349
64251 chr4 6925426 6925426 1 + G A COAD 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGCACCTGCGCGC < 41bp 1 0.0240973994528109 1 0.026388943195343 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925426 nonsynonymous SNV 0.463 2 32 hm5C_associated_SNPs_20065 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr6 27101031 27101031 1 + G A COAD 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCACCGAGATCCTGGAACTGGCGG < 41bp 1 0.622059404118924 1 0.540245592594147 experiment 0.755881191762153 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101031 nonsynonymous SNV 0.919 3 20 hm5C_associated_SNPs_20066 0 0 45 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr16 78143679 78143679 1 + G A COAD 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTACCATACGGATGGGAACAAGAAACTGATGAGAACGGA < 41bp 1 0.386850363671917 1 0.539565980434418 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143679 nonsynonymous SNV 0.997 0 5 hm5C_associated_SNPs_20067 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143660-78143680
64251 chr1 10412707 10412707 1 + C A COAD 10412691 + 10412671 10412711 41 TTTTATCCTTTCTTTTAGGTCGTATTCGGAATAAGCCTGAG TTTTATCCTTTCTTTTAGGTCGTATTCGGAATAAGCATGAG < 41bp 1 0.0485827043081883 1 0.128809720277786 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10412691 chr1:10412707 nonsynonymous SNV 0.989 4 37 hm5C_associated_SNPs_20068 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:10412700-10412720
64251 chr15 25220542 25220542 1 + A G COAD 25220529 + 25220509 25220549 41 TTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGA TTGGCAAGAGTAGCAAGATGCTGCAGCACATTGGCTATAGA < 41bp 1 0.66043163382841 1 0.526533186435699 experiment 0.67913673234318 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25220529 chr15:25220542 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_20069 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr15:25220540-25220560
64251 chr19 10789837 10789837 1 + G A COAD 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTCACGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG < 41bp 1 0.0797976392194437 1 0.0793872177600861 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789837 nonsynonymous SNV 0.804 4 4 hm5C_associated_SNPs_20070 0 0 22 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr19 10789837 10789837 1 + G A COAD 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TCACGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC < 41bp 1 0.0352608069857691 1 0.090662956237793 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789837 nonsynonymous SNV 0.804 4 3 hm5C_associated_SNPs_20071 0 0 22 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr8 37978473 37978473 1 + G A COAD 37978454 + 37978434 37978474 41 TTTTTCCTTTCTGCAGTGACCCTTTGTTTTCTGCTCAGCGC TTTTTCCTTTCTGCAGTGACCCTTTGTTTTCTGCTCAGCAC < 41bp 1 0.0569180394715675 1 0.0740212798118591 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASH2L ENSG00000129691 CDS Human protein_coding chr8:37978454 chr8:37978473 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_20073 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr8:37978451-37978480
64251 chr14 39645301 39645301 1 + C T COAD 39645306 + 39645286 39645326 41 ATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGG ATCCAAGCCAGATTGTTGGCCCTTTCTGGTCCTGGTGGAGG < 41bp 1 0.0264727761703018 1 0.0175952613353729 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39645306 chr14:39645301 synonymous SNV . 0 16 hm5C_associated_SNPs_20074 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:39645279-39645317
64251 chr11 125513698 125513698 1 + C T COAD 125513690 + 125513670 125513710 41 TTTGTTTTCTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTT TTTGTTTTCTTTTTTAGGGGCAAAAAGGTCCCGAGTCACTT < 41bp 1 0.361374514515325 1 0.222907096147537 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513690 chr11:125513698 nonsynonymous SNV 0.998 0 29 hm5C_associated_SNPs_20075 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513698 125513698 1 + C T COAD 125513699 + 125513679 125513719 41 TTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTG TTTTTTAGGGGCAAAAAGGTCCCGAGTCACTTCAGGTGGTG < 41bp 1 0.734824226130195 1 0.396350800991058 experiment 0.53035154773961 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513699 chr11:125513698 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_20076 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513698 125513698 1 + C T COAD 125513700 + 125513680 125513720 41 TTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGT TTTTTAGGGGCAAAAAGGTCCCGAGTCACTTCAGGTGGTGT < 41bp 1 0.115764065383215 1 0.228569030761719 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513700 chr11:125513698 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_20077 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513698 125513698 1 + C T COAD 125513701 + 125513681 125513721 41 TTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTG TTTTAGGGGCAAAAAGGTCCCGAGTCACTTCAGGTGGTGTG < 41bp 1 0.541165286526444 1 0.527314603328705 experiment 0.917669426947112 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513701 chr11:125513698 nonsynonymous SNV 0.998 0 18 hm5C_associated_SNPs_20078 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr17 61499220 61499220 1 + C T COAD 61499200 + 61499180 61499220 41 ACGTGAAGGTAGCTCGGACTCTACCTGTGGCTCAGGCATAC ACGTGAAGGTAGCTCGGACTCTACCTGTGGCTCAGGCATAT < 41bp 1 0.338854825256061 1 0.0795470774173737 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499200 chr17:61499220 synonymous SNV . 0 41 hm5C_associated_SNPs_20079 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr17:61499196-61499223
64251 chr1 161199504 161199504 1 + G A COAD 161199507 + 161199487 161199527 41 GGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTT GGCTCCCTTTGAACCCGACCCAATCTTTGGTCCCAGCATTT < 41bp 1 0.0655215692257291 1 0.0799755454063416 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199507 chr1:161199504 nonsynonymous SNV 0.000 2 18 hm5C_associated_SNPs_20081 0 0 1 UPF1 POSTAR2 ENCODE chr1:161199483-161199575
64251 chr1 100740462 100740462 1 + C A COAD 100740467 + 100740447 100740487 41 ATAAATTTAACTGAGCGTGGCTGTGTGACTAAGATATATGG ATAAATTTAACTGAGAGTGGCTGTGTGACTAAGATATATGG < 41bp 1 0.244641294180508 1 0.12459471821785 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100740467 chr1:100740462 nonsynonymous SNV 0.960 2 16 hm5C_associated_SNPs_20083 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:100740435-100740476
64251 chr20 13765812 13765812 1 + T A COAD 13765830 + 13765810 13765850 41 TGTCTCTCCCCGCGGTAGCACCTCGCCCAGAACCCTGAATA TGACTCTCCCCGCGGTAGCACCTCGCCCAGAACCCTGAATA < 41bp 1 0.150368328049277 1 0.294048339128494 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13765830 chr20:13765812 nonsynonymous SNV 0.120 0 3 hm5C_associated_SNPs_20085 0 0 5 DDX3X POSTAR2 ENCODE chr20:13765709-13765819
64251 chr6 42044971 42044971 1 + G T COAD 42044969 + 42044949 42044989 41 GTGAAGAAGCCCAAGATCCGCAGGAAGAAGTGAGTTGGAGG GTGAAGAAGCCCAAGATCCGCATGAAGAAGTGAGTTGGAGG < 41bp 1 0.651562720393714 1 0.325345158576965 experiment 0.696874559212572 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TAF8 ENSG00000137413 CDS Human protein_coding chr6:42044969 chr6:42044971 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_20086 0 0 2 GRWD1 POSTAR2 ENCODE chr6:42044843-42044976
64251 chr19 17450321 17450321 1 + G A COAD 17450306 + 17450286 17450326 41 CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGAATTTC < 41bp 1 0.311478258190804 1 0.80468612909317 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450306 chr19:17450321 nonsynonymous SNV 0.989 4 36 hm5C_associated_SNPs_20087 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:17450275-17450328
64251 chr16 50655563 50655563 1 + A G COAD 50655547 + 50655527 50655567 41 GAGAAGACTGACGGGCTGGGCAGCGGAGATGAGAAGAAGAT GAGAAGACTGACGGGCTGGGCAGCGGAGATGAGAAGGAGAT < 41bp 1 0.519550656598775 1 0.570928871631622 experiment 0.960898686802451 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NKD1 ENSG00000140807 CDS Human protein_coding chr16:50655547 chr16:50655563 nonsynonymous SNV 0.868 1 37 hm5C_associated_SNPs_20089 0 0 7 BUD13 POSTAR2 ENCODE chr16:50655558-50655627
64251 chr1 62914240 62914240 1 + T C COAD 62914259 + 62914239 62914279 41 CTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTG CCGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTG < 41bp 1 0.303607359404079 1 0.184524178504944 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP1 ENSG00000162607 CDS Human protein_coding chr1:62914259 chr1:62914240 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_20090 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:62914140-62914240
64251 chr6 27101045 27101045 1 + A G COAD 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAGCTGGCGG < 41bp 1 0.641241907809248 1 0.783063769340515 experiment 0.717516184381505 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101045 synonymous SNV . 0 34 hm5C_associated_SNPs_20091 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101045 27101045 1 + A G COAD 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAGCTGGCGGGCAACGCGGCCCGCGACAACAA < 41bp 1 0.615606766273516 1 0.589400410652161 experiment 0.768786467452969 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101045 synonymous SNV . 0 12 hm5C_associated_SNPs_20092 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101045 27101045 1 + A G COAD 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAGCTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC < 41bp 1 0.361475252954715 1 0.284608513116837 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101045 synonymous SNV . 0 4 hm5C_associated_SNPs_20093 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101045 27101045 1 + A G COAD 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAGCTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.410403534873575 1 0.156366467475891 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101045 synonymous SNV . 0 3 hm5C_associated_SNPs_20094 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 125550342 125550342 1 + G A COAD 125550344 + 125550324 125550364 41 GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT GAGATAAAACAAAAACTCAGCATGAACCTGATGAATGAATT < 41bp 1 0.28502503772 1 0.128740251064301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125550344 chr6:125550342 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_20095 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:125550333-125550400
64251 chr3 184717501 184717501 1 + A G COAD 184717491 + 184717471 184717511 41 CTTCGTTTTGCAGCTGTGGCCATTTGTATCACTCATTCTGC CTTCGTTTTGCAGCTGTGGCCATTTGTATCGCTCATTCTGC < 41bp 1 0.0337659602139439 1 0.0345844924449921 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184717491 chr3:184717501 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_20096 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr3:184717489-184717510
64251 chr4 3495183 3495183 1 + G A COAD 3495163 + 3495143 3495183 41 CAGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCG CAGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCA < 41bp 1 0.0247385978018227 1 0.0385319292545319 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOK7 ENSG00000175920 CDS Human protein_coding chr4:3495163 chr4:3495183 synonymous SNV . 0 41 hm5C_associated_SNPs_20097 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:3495180-3495212
64251 chr4 3495183 3495183 1 + G A COAD 3495164 + 3495144 3495184 41 AGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCGG AGGCGGCCCCCACGCGGGGCCACCCCCGGCTTTCTTTTCAG < 41bp 1 0.165603168744008 1 0.141847401857376 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOK7 ENSG00000175920 CDS Human protein_coding chr4:3495164 chr4:3495183 synonymous SNV . 0 40 hm5C_associated_SNPs_20098 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:3495180-3495212
64251 chr14 104642766 104642766 1 + C A COAD 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTCCCCCGGAAACAGAGGACTGCCTCTGCCACCACCCGTG < 41bp 1 0.198164749864914 1 0.0645419359207153 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642766 nonsynonymous SNV 0.008 1 15 hm5C_associated_SNPs_20100 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104642723-104642789
64251 chr4 178262720 178262720 1 + C T COAD 178262712 + 178262692 178262732 41 TCAGTGCCACTGCAGAATAACTGTGTGCCGCTTTGGGGACA TCAGTGCCACTGCAGAATAACTGTGTGCTGCTTTGGGGACA < 41bp 1 0.547703094311034 1 0.0611368715763092 experiment 0.904593811377933 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262712 chr4:178262720 nonsynonymous SNV 0.981 3 29 hm5C_associated_SNPs_20101 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:178262706-178262732
64251 chr4 178262720 178262720 1 + C T COAD 178262719 + 178262699 178262739 41 CACTGCAGAATAACTGTGTGCCGCTTTGGGGACAATAACAG CACTGCAGAATAACTGTGTGCTGCTTTGGGGACAATAACAG < 41bp 1 0.401994781834639 1 0.226697027683258 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262719 chr4:178262720 nonsynonymous SNV 0.981 3 22 hm5C_associated_SNPs_20102 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:178262706-178262732
64251 chr4 178262720 178262720 1 + C T COAD 178262731 + 178262711 178262751 41 ACTGTGTGCCGCTTTGGGGACAATAACAGAATGACATATTT ACTGTGTGCTGCTTTGGGGACAATAACAGAATGACATATTT < 41bp 1 0.381544393502922 1 0.197655230760574 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262731 chr4:178262720 nonsynonymous SNV 0.981 3 10 hm5C_associated_SNPs_20103 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:178262706-178262732
64251 chr7 33014891 33014891 1 + G A COAD 33014888 + 33014868 33014908 41 GTTCAGATTCACACCTATTTCAAGCCCCCGAGTTGCCCTCG GTTCAGATTCACACCTATTTCAAACCCCCGAGTTGCCCTCG < 41bp 1 0.283067605328425 1 0.41394716501236 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP9 ENSG00000122642 CDS Human protein_coding chr7:33014888 chr7:33014891 synonymous SNV . 0 24 hm5C_associated_SNPs_20105 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:33014868-33014891
64251 chr7 33014891 33014891 1 + G A COAD 33014892 + 33014872 33014912 41 AGATTCACACCTATTTCAAGCCCCCGAGTTGCCCTCGGACC AGATTCACACCTATTTCAAACCCCCGAGTTGCCCTCGGACC < 41bp 1 0.10022018041456 1 0.195621609687805 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP9 ENSG00000122642 CDS Human protein_coding chr7:33014892 chr7:33014891 synonymous SNV . 0 20 hm5C_associated_SNPs_20106 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:33014868-33014891
64251 chr19 58904801 58904801 1 + G A COAD 58904813 + 58904793 58904833 41 GGCGCGCCGGGACTGTGAGACGACAGGCTGTGGATGTGTCC GGCGCGCCAGGACTGTGAGACGACAGGCTGTGGATGTGTCC < 41bp 1 0.770604671546543 1 0.729804217815399 experiment 0.458790656906915 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904813 chr19:58904801 nonsynonymous SNV 0.966 2 9 hm5C_associated_SNPs_20107 0 0 58 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr9 131669674 131669674 1 + G A COAD 131669678 + 131669658 131669698 41 GGGCAGCCCCTGGCCCGGAGCCCACCTACCCCAACTCCACC GGGCAGCCCCTGGCCCAGAGCCCACCTACCCCAACTCCACC < 41bp 1 0.106817164591472 1 0.206969290971756 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669678 chr9:131669674 synonymous SNV . 0 17 hm5C_associated_SNPs_20108 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:131669660-131669680
64251 chr21 34925023 34925023 1 + T C COAD 34925019 + 34924999 34925039 41 CCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGA CCCAACAATGCCACCGTTGCCACCCGAGGAGCCACCAATGA < 41bp 1 0.515258328447574 1 0.164766639471054 experiment 0.969483343104851 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925019 chr21:34925023 synonymous SNV . 0 25 hm5C_associated_SNPs_20110 0 0 23 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:34924944-34925072
64251 chr14 105959056 105959056 1 + C T COAD 105959051 + 105959031 105959071 41 TGGTGTCCAGTCAGCAGGAGCAGTGCGCCCTCCTGAGCAAG TGGTGTCCAGTCAGCAGGAGCAGTGTGCCCTCCTGAGCAAG < 41bp 1 0.360920667031728 1 0.253744125366211 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105959051 chr14:105959056 synonymous SNV . 0 26 hm5C_associated_SNPs_20111 0 0 1 PPIG POSTAR2 ENCODE chr14:105959017-105959062
64251 chrX 100088459 100088459 1 + C T COAD 100088446 + 100088426 100088466 41 AACATGGGGGCGGTTGTCCCCCAGGGATCCAGACAGGTATG AACATGGGGGCGGTTGTCCCCCAGGGATCCAGATAGGTATG < 41bp 1 0.604565912131732 1 0.39952278137207 experiment 0.790868175736537 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088446 chrX:100088459 stopgain 0.999 1 34 hm5C_associated_SNPs_20112 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:100088429-100088459
64251 chr15 31197375 31197375 1 + T C COAD 31197363 + 31197343 31197383 41 GTCCAGAAAATACGTAAAGGCTAAAAAATCAATAGATAAGG GTCCAGAAAATACGTAAAGGCTAAAAAATCAACAGATAAGG < 41bp 1 0.421404099180317 1 0.164638936519623 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197363 chr15:31197375 nonsynonymous SNV 0.662 0 33 hm5C_associated_SNPs_20114 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:31197375-31197377
64251 chr16 30779680 30779680 1 + G A COAD 30779681 + 30779661 30779701 41 CAGGGCCCTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCC CAGGGCCCTTCCTCCCGGGACCGAGAACCTGAGGCCAGGCC < 41bp 1 0.177987955408409 1 0.100097835063934 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779681 chr16:30779680 nonsynonymous SNV 0.980 0 20 hm5C_associated_SNPs_20115 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30779646-30779685
64251 chr1 109811555 109811555 1 + C T COAD 109811544 + 109811524 109811564 41 CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGG CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCTGCTACGAGG < 41bp 1 0.0558088918844443 1 0.0892964005470276 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811544 chr1:109811555 nonsynonymous SNV 0.997 2 32 hm5C_associated_SNPs_20116 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811555 109811555 1 + C T COAD 109811552 + 109811532 109811572 41 ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGT ACTTTGCTGGGGCCAAGCTGCCCTGCTACGAGGCCCTGCGT < 41bp 1 0.105212528405906 1 0.0899826288223267 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811552 chr1:109811555 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_20117 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811555 109811555 1 + C T COAD 109811553 + 109811533 109811573 41 CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTG CTTTGCTGGGGCCAAGCTGCCCTGCTACGAGGCCCTGCGTG < 41bp 1 0.100267921796298 1 0.231831401586533 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811553 chr1:109811555 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_20118 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811555 109811555 1 + C T COAD 109811554 + 109811534 109811574 41 TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGG TTTGCTGGGGCCAAGCTGCCCTGCTACGAGGCCCTGCGTGG < 41bp 1 0.308997171225815 1 0.169762581586838 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811554 chr1:109811555 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_20119 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr19 42392911 42392911 1 + C T COAD 42392901 + 42392881 42392921 41 CCCACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTT CCCACCTCATGGCCCTCCTGCAGCACGTGGTCCTGCAGTTT < 41bp 1 0.50825043707905 1 0.235457986593246 experiment 0.983499125841899 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392901 chr19:42392911 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_20120 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42392895-42392919
64251 chr11 65824768 65824768 1 + T G COAD 65824781 + 65824761 65824801 41 GCCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCC GCCCCACGCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCC < 41bp 1 0.415390194365648 1 0.0558830797672272 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824781 chr11:65824768 synonymous SNV . 0 8 hm5C_associated_SNPs_20121 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chr11 65824768 65824768 1 + T G COAD 65824782 + 65824762 65824802 41 CCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC CCCCACGCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC < 41bp 1 0.344607770927409 1 0.145737648010254 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824782 chr11:65824768 synonymous SNV . 0 7 hm5C_associated_SNPs_20122 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chr1 44458013 44458013 1 + C T COAD 44458016 + 44457996 44458036 41 TCTTGCGCCAGGAGCTCCGGCAGTTGCTCCAGGGTCTCCGC TCTTGCGCCAGGAGCTCTGGCAGTTGCTCCAGGGTCTCCGC < 41bp 1 0.47122466640723 1 0.404122412204742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC24 ENSG00000159214 CDS Human protein_coding chr1:44458016 chr1:44458013 nonsynonymous SNV 0.989 1 18 hm5C_associated_SNPs_20123 0 0 1 PPIG POSTAR2 ENCODE chr1:44457976-44458060
64251 chr11 75279852 75279852 1 + T C COAD 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTCCTATACCGTGGGCGTCATGATGATGCACCGGACAGG < 41bp 1 0.469512019866871 1 0.127346634864807 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279852 synonymous SNV . 0 18 hm5C_associated_SNPs_20124 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:75279811-75279852
64251 chr6 31637105 31637105 1 + A G COAD 31637092 + 31637072 31637112 41 CTGCTGAGTCTGGCTGTCTCCCAGGCCTTTCAGACATCCCA CTGCTGAGTCTGGCTGTCTCCCAGGCCTTTCAGGCATCCCA < 41bp 1 0.533231828928572 1 0.555281460285187 experiment 0.933536342142856 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CSNK2B ENSG00000204435;ENSG00000263020 CDS Human other chr6:31637092 chr6:31637105 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_20125 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:31637100-31637120
64251 chr19 50002830 50002830 1 + C T COAD 50002815 + 50002795 50002835 41 CAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTGCGCTTC CAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTGTGCTTC < 41bp 1 0.793838942402911 1 0.525702059268951 experiment 0.412322115194177 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS11 ENSG00000142534 CDS Human protein_coding chr19:50002815 chr19:50002830 nonsynonymous SNV 0.997 2 36 hm5C_associated_SNPs_20127 0 0 38 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50002763-50002833
64251 chr1 156756687 156756687 1 + T C COAD 156756700 + 156756680 156756720 41 ACAGTGATGAGGAAGTAGCCCCCGAAAACTTTTTCTCCCTC ACAGTGACGAGGAAGTAGCCCCCGAAAACTTTTTCTCCCTC < 41bp 1 0.640488643511176 1 0.304850518703461 experiment 0.719022712977648 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756700 chr1:156756687 synonymous SNV . 0 8 hm5C_associated_SNPs_20131 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156756663-156756692
64251 chr6 168352328 168352328 1 + C T COAD 168352327 + 168352307 168352347 41 TGGTATGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCGGGA TGGTATGAGAAGGAGAAGGCCTGCCTGGAGGAGGAGCGGGA < 41bp 1 0.269407103336697 1 0.363610446453094 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout AFDN ENSG00000130396 CDS Human protein_coding chr6:168352327 chr6:168352328 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_20133 0 0 17 U2AF2 POSTAR2 GSE83923,CSM2221660 chr6:168352328-168352329
64251 chr1 203816474 203816474 1 + G A COAD 203816460 + 203816440 203816480 41 TCTACTTCAGGAGCAAGAAGCTCCTCCACTATCCGTATCAA TCTACTTCAGGAGCAAGAAGCTCCTCCACTATCCATATCAA < 41bp 1 0.289593102992581 1 0.357264488935471 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203816460 chr1:203816474 nonsynonymous SNV 0.617 0 35 hm5C_associated_SNPs_20135 0 0 5 BUD13 POSTAR2 ENCODE chr1:203816444-203816506
64251 chr6 147635041 147635041 1 + C T COAD 147635039 + 147635019 147635059 41 GATATCCTATATTTGAAAATCCCTACCCTTTGAGTATACAT GATATCCTATATTTGAAAATCCTTACCCTTTGAGTATACAT < 41bp 1 0.025806190846426 1 0.0763802528381348 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147635039 chr6:147635041 synonymous SNV . 0 23 hm5C_associated_SNPs_20136 0 0 2 FXR1 POSTAR2 ENCODE chr6:147635024-147635168
64251 chr12 110032874 110032874 1 + C T COAD 110032880 + 110032860 110032900 41 CTGAATGCCCTCGGCGTGGGCCACGCCTCTCTGGACCAGCT CTGAATGCCCTCGGTGTGGGCCACGCCTCTCTGGACCAGCT < 41bp 1 0.185917716503921 1 0.107460975646973 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MVK ENSG00000110921 CDS Human protein_coding chr12:110032880 chr12:110032874 synonymous SNV . 0 15 hm5C_associated_SNPs_20149 0 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr11 13399894 13399894 1 + G T COAD 13399900 + 13399880 13399920 41 GTAGGTGGCCCAAAGAGGACCCACCCCACTGTTCCAGGGAT GTAGGTGGCCCAAATAGGACCCACCCCACTGTTCCAGGGAT < 41bp 1 0.088800568471209 1 0.120292842388153 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARNTL ENSG00000133794 CDS Human protein_coding chr11:13399900 chr11:13399894 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_20151 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr11:13399893-13399894
64251 chr16 16235115 16235115 1 + G A COAD 16235100 + 16235080 16235120 41 ACCTCCTGCAGCAGAGAGGTCTTTTCTACAGCATGGCCAAA ACCTCCTGCAGCAGAGAGGTCTTTTCTACAGCATGACCAAA < 41bp 1 0.0253618596758372 1 0.0358085334300995 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16235100 chr16:16235115 nonsynonymous SNV 0.999 5 36 hm5C_associated_SNPs_20152 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:16235100-16235120
64251 chr4 6596420 6596420 1 + C T COAD 6596403 + 6596383 6596423 41 CTACTTCCGTGCCCTGCACGCTCTCAATGTCACCTGGCGTG CTACTTCCGTGCCCTGCACGCTCTCAATGTCACCTGGTGTG < 41bp 1 0.14380516840654 1 0.0302923619747162 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2B2 ENSG00000013288 CDS Human protein_coding chr4:6596403 chr4:6596420 nonsynonymous SNV 0.016 1 38 hm5C_associated_SNPs_20153 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:6596407-6596432
64251 chr11 6414487 6414487 1 + G A COAD 6414500 + 6414480 6414520 41 GGTCTCCGCCTCATCTCTCTCAATATGAATTTTTGTTCCCG GGTCTCCACCTCATCTCTCTCAATATGAATTTTTGTTCCCG < 41bp 1 0.424806203771086 1 0.647922933101654 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6414500 chr11:6414487 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_20154 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:6414451-6414505
64251 chr16 22335865 22335865 1 + C A COAD 22335864 + 22335844 22335884 41 GGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAG GGACTTCCTGGAGCACATGGCAGTGGTGAGGATCAACAAAG < 41bp 1 0.530980105436354 1 0.321810364723206 experiment 0.938039789127292 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22335864 chr16:22335865 synonymous SNV . 0 22 hm5C_associated_SNPs_20158 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:22335856-22335884
64251 chr19 54969678 54969678 1 + G A COAD 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCGCAAGGTCACCCTCAAGGCCATGATCAAAAC < 41bp 1 0.161402812235213 1 0.151391625404358 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969678 nonsynonymous SNV 0.998 3 19 hm5C_associated_SNPs_20159 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr16 30750658 30750658 1 + C T COAD 30750662 + 30750642 30750682 41 TGGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACA TGGACTTAGCAGATAGTGGGCCAGGCGGGTTGGAATTGACA < 41bp 1 0.215045905653881 1 0.159493446350098 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750662 chr16:30750658 synonymous SNV . 0 17 hm5C_associated_SNPs_20160 1 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr16 30750658 30750658 1 + C T COAD 30750663 + 30750643 30750683 41 GGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACAC GGACTTAGCAGATAGTGGGCCAGGCGGGTTGGAATTGACAC < 41bp 1 0.381690908119753 1 0.476254969835281 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750663 chr16:30750658 synonymous SNV . 0 16 hm5C_associated_SNPs_20161 1 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr19 36370320 36370320 1 + C T COAD 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC TGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC < 41bp 1 0.437686839615756 1 0.0586024820804596 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370340 chr19:36370320 nonsynonymous SNV 1.000 5 1 hm5C_associated_SNPs_20162 0 0 4 FUS POSTAR2 GSE40653,GSM998875 chr19:36370300-36370320
64251 chr2 127453576 127453576 1 + G A COAD 127453565 + 127453545 127453585 41 GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTA GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCACTACATGTA < 41bp 1 0.692544252668855 1 0.424920201301575 experiment 0.614911494662289 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GYPC ENSG00000136732 CDS Human protein_coding chr2:127453565 chr2:127453576 nonsynonymous SNV 0.003 0 32 hm5C_associated_SNPs_20163 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:127453575-127453576
64251 chr2 27277614 27277614 1 + G A COAD 27277595 + 27277575 27277615 41 TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCAT < 41bp 1 0.683912876972156 1 0.854221343994141 experiment 0.632174246055688 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27277595 chr2:27277614 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_20166 0 0 1 YBX3 POSTAR2 ENCODE chr2:27277497-27277618
64251 chr5 10411484 10411484 1 + T C COAD 10411473 + 10411453 10411493 41 ATTCTTATTTATTGGGAGACCAGGAAGAAAATGAAAACAGT ATTCTTATTTATTGGGAGACCAGGAAGAAAACGAAAACAGT < 41bp 1 0.577766218871868 1 0.750838041305542 experiment 0.844467562256263 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411473 chr5:10411484 synonymous SNV . 0 32 hm5C_associated_SNPs_20167 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10411480-10411540
64251 chr17 67515559 67515559 1 + G A COAD 67515562 + 67515542 67515582 41 CTGTCACCTTTTATGGCGCACTGTTTCGGGAGGTAGGTGAC CTGTCACCTTTTATGGCACACTGTTTCGGGAGGTAGGTGAC < 41bp 1 0.250188822163535 1 0.0393846035003662 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K6 ENSG00000108984 CDS Human protein_coding chr17:67515562 chr17:67515559 nonsynonymous SNV 0.986 3 18 hm5C_associated_SNPs_20168 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:67515544-67515573
64251 chr22 39770435 39770435 1 + G A COAD 39770450 + 39770430 39770470 41 ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTCACCTGCCTG ATGGCATGGCCGTGGGCGTGCTCGCCTTCCTCACCTGCCTG < 41bp 1 0.593722990666707 1 0.0804086625576019 experiment 0.812554018666586 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39770450 chr22:39770435 nonsynonymous SNV 0.895 3 6 hm5C_associated_SNPs_20169 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39770430-39770489
64251 chr1 46739342 46739342 1 + T C COAD 46739322 + 46739302 46739342 41 TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGT TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGC < 41bp 1 0.725370052126368 1 0.50407737493515 experiment 0.549259895747264 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739322 chr1:46739342 synonymous SNV . 0 41 hm5C_associated_SNPs_20172 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:46739299-46739346
64251 chr19 45797675 45797675 1 + G T COAD 45797692 + 45797672 45797712 41 TGAGCGCCCGTCACTGTTGCCAAATGGGAAAGAAAACAGGT TGATCGCCCGTCACTGTTGCCAAATGGGAAAGAAAACAGGT < 41bp 1 0.228842209846479 1 0.816802203655243 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797692 chr19:45797675 nonsynonymous SNV 0.977 1 4 hm5C_associated_SNPs_20174 0 0 1 PPIG POSTAR2 ENCODE chr19:45797645-45797700
64251 chr2 239257977 239257977 1 + G A COAD 239257989 + 239257969 239258009 41 AATTCCTCGGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGG AATTCCTCAGCCTGGGAGTGCAAGACCAGCCCCTCCCCGGG < 41bp 1 0.778764145622035 1 0.581801414489746 experiment 0.442471708755929 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239257989 chr2:239257977 nonsynonymous SNV 0.971 4 9 hm5C_associated_SNPs_20175 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:239257955-239257986
64251 chr17 4685827 4685827 1 + C T COAD 4685815 + 4685795 4685835 41 CAGATGCTGCGCTCGGTCTTCTCCTCGGCGTTCGGGGTGCT CAGATGCTGCGCTCGGTCTTCTCCTCGGCGTTTGGGGTGCT < 41bp 1 0.407338402086912 1 0.436673521995544 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4685815 chr17:4685827 synonymous SNV . 0 33 hm5C_associated_SNPs_20176 0 0 2 RPS3 POSTAR2 ENCODE chr17:4685819-4685857
64251 chr6 139487470 139487470 1 + C T COAD 139487463 + 139487443 139487483 41 GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACG GATCTGCAGCTTCGGTAGGCCGGTGGATCTGGAGAAGGACG < 41bp 1 0.530876897993428 1 0.513662934303284 experiment 0.938246204013143 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139487463 chr6:139487470 synonymous SNV . 0 28 hm5C_associated_SNPs_20178 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr6:139487430-139487473
64251 chr1 20234225 20234225 1 + G A COAD 20234221 + 20234201 20234241 41 GTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACT GTCACCTTGGTGAAGACCTTCGCCACTCTCAACATCTGACT < 41bp 1 0.732436749201993 1 0.112271517515182 experiment 0.535126501596014 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20234221 chr1:20234225 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_20179 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:20234213-20234225
64251 chr19 1978445 1978445 1 + C T COAD 1978465 + 1978445 1978485 41 CGATCAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGG TGATCAAGTCCCGGGCCCCGCAGCTGCACCTGGAGTACCGG < 41bp 1 0.461730765032173 1 0.775980472564697 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1978465 chr19:1978445 nonsynonymous SNV 0.966 2 1 hm5C_associated_SNPs_20180 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:1978440-1978460
64251 chr5 7889311 7889311 1 + T C COAD 7889293 + 7889273 7889313 41 GTGCAGTAAACAAGGGGCAGCCGATTATAGCCGCTTTGTAC GTGCAGTAAACAAGGGGCAGCCGATTATAGCCGCTTTGCAC < 41bp 1 0.224233241508487 1 0.110122352838516 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7889293 chr5:7889311 nonsynonymous SNV 0.002 1 39 hm5C_associated_SNPs_20181 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:7889298-7889340
64251 chr16 70509358 70509358 1 + T C COAD 70509347 + 70509327 70509367 41 CTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTG CTGCTCCGCACCTTCGGGGGCGGCTTTGAGCCGCACACCTG < 41bp 1 0.382970111469673 1 0.36390945315361 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70509347 chr16:70509358 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_20183 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr16:70509350-70509379
64251 chr19 13930237 13930237 1 + G A COAD 13930238 + 13930218 13930258 41 CCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT CCCATGCACACCTGTGCCCACTACCTGTTCACCGCACTGCT < 41bp 1 0.156162167971747 1 0.0408629477024078 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13930238 chr19:13930237 nonsynonymous SNV 0.968 1 20 hm5C_associated_SNPs_20185 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:13930232-13930263
64251 chr20 52835664 52835664 1 + T C COAD 52835659 + 52835639 52835679 41 TTGTATGCAAAATTCGGGAGCAACATAAACCTTGAAGCTGA TTGTATGCAAAATTCGGGAGCAACACAAACCTTGAAGCTGA < 41bp 1 0.603021213532217 1 0.111890882253647 experiment 0.793957572935567 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52835659 chr20:52835664 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_20186 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr20:52835560-52835685
64251 chr2 130939973 130939973 1 + C T COAD 130939957 + 130939937 130939977 41 CGGCGGAAGAAGGTGCTGAGCACCGAGGAGATGGAGCTGTA CGGCGGAAGAAGGTGCTGAGCACCGAGGAGATGGAGTTGTA < 41bp 1 0.616605639049083 1 0.193442434072495 experiment 0.766788721901835 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MZT2B ENSG00000152082 CDS Human protein_coding chr2:130939957 chr2:130939973 synonymous SNV . 0 37 hm5C_associated_SNPs_20187 0 0 29 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:130939940-130939980
64251 chr2 189458720 189458720 1 + G A COAD 189458701 + 189458681 189458721 41 GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGT GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCAT < 41bp 1 0.61055792879926 1 0.112538546323776 experiment 0.77888414240148 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458701 chr2:189458720 synonymous SNV . 0 40 hm5C_associated_SNPs_20188 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr2 189458720 189458720 1 + G A COAD 189458714 + 189458694 189458734 41 GAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGTG GAAGGCACAGTATTTTGTCTCGACCCATTAGACAGTAGGTG < 41bp 1 0.320207044873536 1 0.329787701368332 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458714 chr2:189458720 synonymous SNV . 0 27 hm5C_associated_SNPs_20189 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr13 52293457 52293457 1 + G A COAD 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGCGCCTGGGAGGTTATCAGACCAGTGCTGTGGCCTCA < 41bp 1 0.48844207275262 1 0.882612228393555 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293457 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_20190 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:52293456-52293486
64251 chr15 85164147 85164147 1 + G A COAD 85164140 + 85164120 85164160 41 AGCCGGAAATCCCACCTCATCACACACGAGAGGACCCACAC AGCCGGAAATCCCACCTCATCACACACAAGAGGACCCACAC < 41bp 1 0.429244334922173 1 0.540036499500275 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164140 chr15:85164147 nonsynonymous SNV 0.371 0 28 hm5C_associated_SNPs_20191 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:85164125-85164147
64251 chr8 95885679 95885679 1 + G A COAD 95885659 + 95885639 95885679 41 CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTA < 41bp 1 0.606656112171103 1 0.171868026256561 experiment 0.786687775657793 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95885659 chr8:95885679 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_20192 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:95885653-95885686
64251 chr10 287975 287975 1 + G A COAD 287976 + 287956 287996 41 TCCAGATACCTAATCATGAGCTGGTTTGGGCTAAAATGAAA TCCAGATACCTAATCATGAACTGGTTTGGGCTAAAATGAAA < 41bp 1 0.50051135294069 1 0.153655201196671 experiment 0.998977294118621 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMYND11 ENSG00000015171 CDS Human protein_coding chr10:287976 chr10:287975 synonymous SNV . 0 20 hm5C_associated_SNPs_20193 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:287961-287978
64251 chr9 97767846 97767846 1 + A C COAD 97767847 + 97767827 97767867 41 ACGAAATGGATTGGAGTGAACCGGAGACCCCGAAAACGGAA ACGAAATGGATTGGAGTGACCCGGAGACCCCGAAAACGGAA < 41bp 1 0.658528383161823 1 0.734252035617828 experiment 0.682943233676354 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97767847 chr9:97767846 nonsynonymous SNV 0.814 2 20 hm5C_associated_SNPs_20195 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:97767835-97767858
64251 chr7 99621873 99621873 1 + G A COAD 99621875 + 99621855 99621895 41 TTTGACCTTCATCACGAGGCCACCCAGTCCCACTTCAAACA TTTGACCTTCATCACGAGACCACCCAGTCCCACTTCAAACA < 41bp 1 0.317356986487522 1 0.0715994238853455 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99621875 chr7:99621873 nonsynonymous SNV 0.964 0 19 hm5C_associated_SNPs_20197 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr7:99621859-99621881
64251 chr3 57898181 57898181 1 + A C COAD 57898199 + 57898179 57898219 41 AGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT AGCGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT < 41bp 1 0.579949404499702 1 0.754823684692383 experiment 0.840101191000596 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898199 chr3:57898181 nonsynonymous SNV 0.989 1 3 hm5C_associated_SNPs_20198 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:57898171-57898185
64251 chr22 21345925 21345925 1 + G A COAD 21345926 + 21345906 21345946 41 TGTACCCCCAGGTGGACACGCATCCCAACTGAACACCTGCT TGTACCCCCAGGTGGACACACATCCCAACTGAACACCTGCT < 41bp 1 0.0574001077080899 1 0.0876547694206238 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTR1 ENSG00000099949 CDS Human protein_coding chr22:21345926 chr22:21345925 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_20200 0 0 9 BUD13 POSTAR2 ENCODE chr22:21345896-21345971
64251 chr7 5644956 5644956 1 + G A COAD 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA AGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA < 41bp 1 0.230654783329136 1 0.183800637722015 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644956 nonsynonymous SNV 0.955 0 1 hm5C_associated_SNPs_20202 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr19 11145689 11145689 1 + G A COAD 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACA < 41bp 1 0.196785217959161 1 0.144530385732651 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145689 nonsynonymous SNV 0.464 4 41 hm5C_associated_SNPs_20203 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145689 11145689 1 + G A COAD 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACAACG < 41bp 1 0.591752329720875 1 0.521915912628174 experiment 0.81649534055825 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145689 nonsynonymous SNV 0.464 4 38 hm5C_associated_SNPs_20204 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145689 11145689 1 + G A COAD 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACAACGCGGAGGTGGAGCGGCTGAC < 41bp 1 0.746125720128292 1 0.6867436170578 experiment 0.507748559743415 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145689 nonsynonymous SNV 0.464 4 19 hm5C_associated_SNPs_20205 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145689 11145689 1 + G A COAD 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACAACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.473288650001019 1 0.517554402351379 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145689 nonsynonymous SNV 0.464 4 6 hm5C_associated_SNPs_20206 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145689 11145689 1 + G A COAD 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACAACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.222537161482395 1 0.246035575866699 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145689 nonsynonymous SNV 0.464 4 3 hm5C_associated_SNPs_20207 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr17 78346491 78346491 1 + C T COAD 78346488 + 78346468 78346508 41 GTGGCCCGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTT GTGGCCCGGATCCGCCTCTGCCTTGACAGAGCTGCAGATTT < 41bp 1 0.0195080363672755 1 0.0652096271514893 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346488 chr17:78346491 synonymous SNV . 0 24 hm5C_associated_SNPs_20208 0 0 5 DDX24 POSTAR2 ENCODE chr17:78346460-78346494
64251 chr17 78346491 78346491 1 + C T COAD 78346494 + 78346474 78346514 41 CGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTTCCTCTC CGGATCCGCCTCTGCCTTGACAGAGCTGCAGATTTCCTCTC < 41bp 1 0.260784306256229 1 0.683984816074371 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346494 chr17:78346491 synonymous SNV . 0 18 hm5C_associated_SNPs_20209 0 0 5 DDX24 POSTAR2 ENCODE chr17:78346460-78346494
64251 chr2 160087103 160087103 1 + G A COAD 160087089 + 160087069 160087109 41 GCGGTACAGCTGAGCACAGACCCCGCAACACGCCGTTCATG GCGGTACAGCTGAGCACAGACCCCGCAACACGCCATTCATG < 41bp 1 0.22199370886233 1 0.309577465057373 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160087089 chr2:160087103 synonymous SNV . 0 35 hm5C_associated_SNPs_20210 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:160087096-160087118
64251 chr19 10893717 10893717 1 + A C COAD 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGACGTTCTTCCTCTCCCACCCGGCCTA < 41bp 1 0.180642926482493 1 0.115686297416687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893717 nonsynonymous SNV 0.996 4 17 hm5C_associated_SNPs_20211 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:10893688-10893718
64251 chr1 53420462 53420462 1 + A G COAD 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGAAGATGAGTAAGGGAGGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.307514968564535 1 0.183474898338318 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420462 nonsynonymous SNV 0.004 3 18 hm5C_associated_SNPs_20212 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr2 42909547 42909547 1 + G A COAD 42909544 + 42909524 42909564 41 TCATTTTGTTTCTTTAGTTTCACGCTATGGATACATTGTAT TCATTTTGTTTCTTTAGTTTCACACTATGGATACATTGTAT < 41bp 1 0.0587374311710698 1 0.165441006422043 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTA3 ENSG00000057935 CDS Human protein_coding chr2:42909544 chr2:42909547 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_20213 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:42909538-42909558
64251 chr16 70589098 70589098 1 + G A COAD 70589086 + 70589066 70589106 41 TTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT TTGCCCTGACAGGAGGAGAGCTGGTCTATTTCAAGATGGAT < 41bp 1 0.209837980338373 1 0.180598556995392 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589086 chr16:70589098 nonsynonymous SNV 0.996 4 33 hm5C_associated_SNPs_20214 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589098 70589098 1 + G A COAD 70589091 + 70589071 70589111 41 CTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTGT CTGACAGGAGGAGAGCTGGTCTATTTCAAGATGGATCCTGT < 41bp 1 0.0782239318343613 1 0.0823500156402588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589091 chr16:70589098 nonsynonymous SNV 0.996 4 28 hm5C_associated_SNPs_20215 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chrX 41075247 41075247 1 + A T COAD 41075229 + 41075209 41075249 41 CTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTGCAAT CTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTGCTAT < 41bp 1 0.378960159238685 1 0.242537409067154 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41075229 chrX:41075247 synonymous SNV . 0 39 hm5C_associated_SNPs_20217 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41075183-41075254
64251 chr16 2814615 2814615 1 + G A COAD 2814601 + 2814581 2814621 41 TTAAAGAAGATTTGAATGGACCGTTTCTTAATCAGCTGGAA TTAAAGAAGATTTGAATGGACCGTTTCTTAATCAACTGGAA < 41bp 1 0.026880646594498 1 0.0330659747123718 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814601 chr16:2814615 synonymous SNV . 0 35 hm5C_associated_SNPs_20219 0 0 42 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr16 2814615 2814615 1 + G A COAD 2814613 + 2814593 2814633 41 TGAATGGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT TGAATGGACCGTTTCTTAATCAACTGGAAACAGATCCATCT < 41bp 1 0.19291494217352 1 0.773923993110657 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814613 chr16:2814615 synonymous SNV . 0 23 hm5C_associated_SNPs_20220 0 0 42 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr21 40191440 40191440 1 + C A COAD 40191451 + 40191431 40191471 41 TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT TCCCAAAGAACACGACTCCCCTGAGAACGGTGCGGACAGCT < 41bp 1 0.541512849161963 1 0.430762946605682 experiment 0.916974301676074 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETS2 ENSG00000157557 CDS Human protein_coding chr21:40191451 chr21:40191440 nonsynonymous SNV 0.034 0 10 hm5C_associated_SNPs_20221 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr21:40191420-40191440
64251 chr14 53226459 53226459 1 + T C COAD 53226460 + 53226440 53226480 41 AATCCTAATGCTGGATTTGTCCATCAACTTCAGGTAACTTT AATCCTAATGCTGGATTTGCCCATCAACTTCAGGTAACTTT < 41bp 1 0.0614838551550069 1 0.290076613426208 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STYX ENSG00000198252 CDS Human protein_coding chr14:53226460 chr14:53226459 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_20222 0 0 2 BUD13 POSTAR2 ENCODE chr14:53226414-53226486
64251 chr14 53226459 53226459 1 + T C COAD 53226470 + 53226450 53226490 41 CTGGATTTGTCCATCAACTTCAGGTAACTTTTCTTCCTCTT CTGGATTTGCCCATCAACTTCAGGTAACTTTTCTTCCTCTT < 41bp 1 0.544088065239978 1 0.7628413438797 experiment 0.911823869520044 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control STYX ENSG00000198252 CDS Human protein_coding chr14:53226470 chr14:53226459 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_20223 0 0 2 BUD13 POSTAR2 ENCODE chr14:53226414-53226486
64251 chr18 77895407 77895407 1 + C T COAD 77895411 + 77895391 77895431 41 TGCAACGAGCTCTTTCCGTCCAACGTCTACCAGGTCCACAT TGCAACGAGCTCTTTCTGTCCAACGTCTACCAGGTCCACAT < 41bp 1 0.513850246246202 1 0.330947995185852 experiment 0.972299507507596 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895411 chr18:77895407 nonsynonymous SNV 0.454 4 17 hm5C_associated_SNPs_20224 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:77895378-77895408
64251 chr20 62366598 62366598 1 + C G COAD 62366599 + 62366579 62366619 41 CTGGACCAGTGTGTGGAGACCCTGCAGAAGCAGACCAGGGT CTGGACCAGTGTGTGGAGAGCCTGCAGAAGCAGACCAGGGT < 41bp 1 0.0695836071003268 1 0.443540096282959 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62366599 chr20:62366598 nonsynonymous SNV 0.013 1 20 hm5C_associated_SNPs_20225 0 0 13 BUD13 POSTAR2 ENCODE chr20:62366564-62366637
64251 chr2 162242082 162242082 1 + G A COAD 162242075 + 162242055 162242095 41 GGGTCACTTAAACAAGCCATCTATCCAGGTATTGCCTATAT GGGTCACTTAAACAAGCCATCTATCCAAGTATTGCCTATAT < 41bp 1 0.081705485142934 1 0.267526358366013 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162242075 chr2:162242082 synonymous SNV . 0 28 hm5C_associated_SNPs_20226 0 0 5 BUD13 POSTAR2 ENCODE chr2:162242016-162242106
64251 chr22 46611214 46611214 1 + C T COAD 46611227 + 46611207 46611247 41 GTCCACGCGTGTGAAGGCTGCAAGGTAGAGGGGAGCTGGAA GTCCACGTGTGTGAAGGCTGCAAGGTAGAGGGGAGCTGGAA < 41bp 1 0.72351972402327 1 0.423186719417572 experiment 0.55296055195346 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPARA ENSG00000186951 CDS Human protein_coding chr22:46611227 chr22:46611214 nonsynonymous SNV 0.918 5 8 hm5C_associated_SNPs_20227 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:46611193-46611214
64251 chr1 20977173 20977173 1 + G A COAD 20977174 + 20977154 20977194 41 CCTCCTCTGCTCATGGAGGGCAGCCCTGTGATGTCCCTGCA CCTCCTCTGCTCATGGAGGACAGCCCTGTGATGTCCCTGCA < 41bp 1 0.39535613625189 1 0.278109759092331 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20977174 chr1:20977173 nonsynonymous SNV 0.995 1 20 hm5C_associated_SNPs_20228 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr1:20977162-20977186
64251 chr6 31593370 31593370 1 + C T COAD 31593350 + 31593330 31593370 41 GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGT < 41bp 1 0.53681996426197 1 0.255204319953918 experiment 0.92636007147606 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593350 chr6:31593370 synonymous SNV . 0 41 hm5C_associated_SNPs_20229 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593370 31593370 1 + C T COAD 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGTG < 41bp 1 0.386938764480967 1 0.0896115005016327 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593370 synonymous SNV . 0 40 hm5C_associated_SNPs_20230 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593370 31593370 1 + C T COAD 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGTGG < 41bp 1 0.343746388630413 1 0.101510733366013 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593370 synonymous SNV . 0 39 hm5C_associated_SNPs_20231 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593370 31593370 1 + C T COAD 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGTGGA < 41bp 1 0.289890815152502 1 0.327859133481979 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593370 synonymous SNV . 0 38 hm5C_associated_SNPs_20232 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593370 31593370 1 + C T COAD 31593388 + 31593368 31593408 41 CGCGGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC CGTGGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC < 41bp 1 0.667985829078255 1 0.736867547035217 experiment 0.66402834184349 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593388 chr6:31593370 synonymous SNV . 0 3 hm5C_associated_SNPs_20233 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr3 49713566 49713566 1 + G A COAD 49713571 + 49713551 49713591 41 AAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTT AAGCGCCCCAAGGCCAAGTCCTTCTTTCAGACCAAAGCCTT < 41bp 1 0.185584742628792 1 0.0916586220264435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49713571 chr3:49713566 nonsynonymous SNV 0.985 1 16 hm5C_associated_SNPs_20241 0 0 6 FXR2 POSTAR2 ENCODE chr3:49713520-49713590
64251 chr8 145727028 145727028 1 + C A COAD 145727024 + 145727004 145727044 41 GCTGAGCCCCCTGGACAGCACCACCCCCCACACCCTGGTCC GCTGAGCCCCCTGGACAGCACCACACCCCACACCCTGGTCC < 41bp 1 0.448217521697687 1 0.0655389428138733 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727024 chr8:145727028 synonymous SNV . 0 25 hm5C_associated_SNPs_20245 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr18 77895396 77895396 1 + C T COAD 77895411 + 77895391 77895431 41 TGCAACGAGCTCTTTCCGTCCAACGTCTACCAGGTCCACAT TGCAATGAGCTCTTTCCGTCCAACGTCTACCAGGTCCACAT < 41bp 1 0.477233339319394 1 0.357671350240707 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895411 chr18:77895396 synonymous SNV . 0 6 hm5C_associated_SNPs_20246 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:77895378-77895408
64251 chr12 104340405 104340405 1 + G A COAD 104340419 + 104340399 104340439 41 CTATGCGAGTCAGAAGAAAACATTTGAAATTAATCCCAGAC CTATGCAAGTCAGAAGAAAACATTTGAAATTAATCCCAGAC < 41bp 1 0.117938222734995 1 0.224143326282501 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340419 chr12:104340405 synonymous SNV . 0 7 hm5C_associated_SNPs_20247 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr12:104340397-104340459
64251 chr17 61489398 61489398 1 + G A COAD 61489416 + 61489396 61489436 41 ACGTTGACTACAGTGGAATGCGCCCTTTGGATAGGGCAGTG ACATTGACTACAGTGGAATGCGCCCTTTGGATAGGGCAGTG < 41bp 1 0.333560741744543 1 0.134626418352127 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control TANC2 ENSG00000170921 CDS Human protein_coding chr17:61489416 chr17:61489398 nonsynonymous SNV 0.996 2 3 hm5C_associated_SNPs_20248 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:61489377-61489407
64251 chr19 33167258 33167258 1 + C T COAD 33167256 + 33167236 33167276 41 CTGGTGCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCT CTGGTGCTGACCGTCGGTGGCTTGGCGGACTCGCAGAACCT < 41bp 1 0.426185516986941 1 0.233231753110886 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167256 chr19:33167258 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_20251 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr19 33167258 33167258 1 + C T COAD 33167261 + 33167241 33167281 41 GCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCTGCGGC GCTGACCGTCGGTGGCTTGGCGGACTCGCAGAACCTGCGGC < 41bp 1 0.67935123789524 1 0.426190584897995 experiment 0.641297524209521 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167261 chr19:33167258 nonsynonymous SNV 0.992 1 18 hm5C_associated_SNPs_20252 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr2 209190006 209190006 1 + C T COAD 209190000 + 209189980 209190020 41 GTTTTTGTTTGTAGAACAAACCAAGACACTGATGTTTTTTG GTTTTTGTTTGTAGAACAAACCAAGATACTGATGTTTTTTG < 41bp 1 0.121222636481473 1 0.0904053151607513 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190000 chr2:209190006 nonsynonymous SNV 0.965 4 27 hm5C_associated_SNPs_20253 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:209190000-209190020
64251 chr19 39215150 39215150 1 + G A COAD 39215157 + 39215137 39215177 41 GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT GAGCACCTGCGCCACCAGTTCGCCAGCCAGGCCAATGTTGT < 41bp 1 0.711394993299504 1 0.670987606048584 experiment 0.577210013400992 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215157 chr19:39215150 nonsynonymous SNV 0.997 1 14 hm5C_associated_SNPs_20255 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr19 39215150 39215150 1 + G A COAD 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGCGCCACCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC < 41bp 1 0.272062147695756 1 0.753510177135468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215150 nonsynonymous SNV 0.997 1 8 hm5C_associated_SNPs_20256 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr19 39215150 39215150 1 + G A COAD 39215169 + 39215149 39215189 41 CGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT CACCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT < 41bp 1 0.234754892708547 1 0.0907601416110992 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215169 chr19:39215150 nonsynonymous SNV 0.997 1 2 hm5C_associated_SNPs_20257 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr17 37676270 37676270 1 + T C COAD 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGCGGCGCACAGCTGAACAGACCCTACA < 41bp 1 0.191148507055652 1 0.105416268110275 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676270 nonsynonymous SNV 0.995 4 19 hm5C_associated_SNPs_20259 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr7 4002325 4002325 1 + C T COAD 4002345 + 4002325 4002365 41 CCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG TCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG < 41bp 1 0.213274127268501 1 0.450427293777466 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SDK1 ENSG00000146555 CDS Human protein_coding chr7:4002345 chr7:4002325 nonsynonymous SNV 0.611 1 1 hm5C_associated_SNPs_20260 0 0 1 GRWD1 POSTAR2 ENCODE chr7:4002303-4002476
64251 chr6 31601226 31601226 1 + C T COAD 31601218 + 31601198 31601238 41 CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAG CCCACCTCCCAGCAGTTCTGCTGTCTTCTGCCTGGACCAAG < 41bp 1 0.30637808319419 1 0.0874298810958862 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31601218 chr6:31601226 nonsynonymous SNV 0.999 3 29 hm5C_associated_SNPs_20262 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31601183-31601237
64251 chr7 75687295 75687295 1 + C T COAD 75687304 + 75687284 75687324 41 CAGGCATGACCCGGGACGACCTGTTCAACACCAATGCCACG CAGGCATGACCTGGGACGACCTGTTCAACACCAATGCCACG < 41bp 1 0.185380419897113 1 0.293315708637238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDH2 ENSG00000146701 CDS Human protein_coding chr7:75687304 chr7:75687295 nonsynonymous SNV 0.966 5 12 hm5C_associated_SNPs_20263 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:75687280-75687320
64251 chr1 12009947 12009947 1 + A G COAD 12009955 + 12009935 12009975 41 GAGGATCTGGTCATTCTCTTCGCAGACAGGTAGGTGGGTCA GAGGATCTGGTCGTTCTCTTCGCAGACAGGTAGGTGGGTCA < 41bp 1 0.628944182635848 1 0.868554592132568 experiment 0.742111634728303 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009955 chr1:12009947 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_20264 0 0 3 DDX24 POSTAR2 ENCODE chr1:12009877-12009966
64251 chr6 157099202 157099202 1 + G A COAD 157099182 + 157099162 157099202 41 GCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGG GCTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGA < 41bp 1 0.0779387249828721 1 0.455636471509933 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARID1B ENSG00000049618 CDS Human protein_coding chr6:157099182 chr6:157099202 nonsynonymous SNV 0.660 1 41 hm5C_associated_SNPs_20265 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:157099193-157099233
64251 chr6 157099202 157099202 1 + G A COAD 157099183 + 157099163 157099203 41 CTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGC CTGTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGAC < 41bp 1 0.383149945464544 1 0.474559366703033 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARID1B ENSG00000049618 CDS Human protein_coding chr6:157099183 chr6:157099202 nonsynonymous SNV 0.660 1 40 hm5C_associated_SNPs_20266 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:157099193-157099233
64251 chr6 157099202 157099202 1 + G A COAD 157099185 + 157099165 157099205 41 GTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCAT GTCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGACAT < 41bp 1 0.387484516868484 1 0.681771636009216 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARID1B ENSG00000049618 CDS Human protein_coding chr6:157099185 chr6:157099202 nonsynonymous SNV 0.660 1 38 hm5C_associated_SNPs_20267 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:157099193-157099233
64251 chr6 157099202 157099202 1 + G A COAD 157099186 + 157099166 157099206 41 TCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGGCATC TCCTCCTCCTCCTCCTCCTCCGCGGCGGCAGCGGCGACATC < 41bp 1 0.428328229291394 1 0.547510921955109 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARID1B ENSG00000049618 CDS Human protein_coding chr6:157099186 chr6:157099202 nonsynonymous SNV 0.660 1 37 hm5C_associated_SNPs_20268 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:157099193-157099233
64251 chr7 77214878 77214878 1 + C T COAD 77214877 + 77214857 77214897 41 TAGATCATTGTAATGGCCTGCCGAGAATTTGAGATGGGAAG TAGATCATTGTAATGGCCTGCTGAGAATTTGAGATGGGAAG < 41bp 1 0.274276082835196 1 0.40167498588562 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77214877 chr7:77214878 stopgain 1.000 1 22 hm5C_associated_SNPs_20270 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77214858-77214896
64251 chr3 47046765 47046765 1 + C T COAD 47046776 + 47046756 47046796 41 TACCTCATCCGCGTGGAGCCCTTCACCTCCCTGCACGTCCA TACCTCATCTGCGTGGAGCCCTTCACCTCCCTGCACGTCCA < 41bp 1 0.248230574792923 1 0.194359838962555 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47046776 chr3:47046765 nonsynonymous SNV 0.982 5 10 hm5C_associated_SNPs_20271 0 0 5 BUD13 POSTAR2 ENCODE chr3:47046738-47046786
64251 chr5 179146762 179146762 1 + C T COAD 179146752 + 179146732 179146772 41 TGATGAGCCTGAGTACGTACCTGATCCAGACGCAGAGAAAC TGATGAGCCTGAGTACGTACCTGATCCAGATGCAGAGAAAC < 41bp 1 0.380584226987507 1 0.0581400394439697 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146752 chr5:179146762 synonymous SNV . 0 31 hm5C_associated_SNPs_20272 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146762 179146762 1 + C T COAD 179146764 + 179146744 179146784 41 GTACGTACCTGATCCAGACGCAGAGAAACCTGAGGATTGGT GTACGTACCTGATCCAGATGCAGAGAAACCTGAGGATTGGT < 41bp 1 0.477032036977418 1 0.690922558307648 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179146764 chr5:179146762 synonymous SNV . 0 19 hm5C_associated_SNPs_20273 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr5 179146762 179146762 1 + C T COAD 179146773 + 179146753 179146793 41 TGATCCAGACGCAGAGAAACCTGAGGATTGGTAAGAACTTC TGATCCAGATGCAGAGAAACCTGAGGATTGGTAAGAACTTC < 41bp 1 0.69024785706616 1 0.362887024879456 experiment 0.619504285867679 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179146773 chr5:179146762 synonymous SNV . 0 10 hm5C_associated_SNPs_20274 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179146671-179146782
64251 chr1 171519301 171519301 1 + T C COAD 171519315 + 171519295 171519335 41 TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTT TGGTTTCACTGAAGTGGTATCCAAAAAACAACAAAAACGTT < 41bp 1 0.0935775721244656 1 0.711390376091003 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171519315 chr1:171519301 synonymous SNV . 0 7 hm5C_associated_SNPs_20276 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:171519228-171519302
64251 chr2 74086418 74086418 1 + A G COAD 74086431 + 74086411 74086451 41 AGTGTCGACCTACACACTCACTGCTCTTACCAGATGATGTT AGTGTCGGCCTACACACTCACTGCTCTTACCAGATGATGTT < 41bp 1 0.513596510359217 1 0.145746529102325 experiment 0.972806979281565 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74086431 chr2:74086418 nonsynonymous SNV 0.590 5 8 hm5C_associated_SNPs_20277 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:74086410-74086441
64251 chr17 57644022 57644022 1 + T C COAD 57644036 + 57644016 57644056 41 AGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA AGGAACCACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA < 41bp 1 0.110255316054699 1 0.0646267533302307 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX40 ENSG00000108406 CDS Human protein_coding chr17:57644036 chr17:57644022 synonymous SNV . 0 7 hm5C_associated_SNPs_20278 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:57643987-57644028
64251 chr17 21731052 21731052 1 + G T COAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGACCAGCAGAGTCTCATCTT < 41bp 1 0.301015267006855 1 0.334654361009598 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731052 nonsynonymous SNV 0.928 2 33 hm5C_associated_SNPs_20279 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr5 65350485 65350485 1 + G T COAD 65350481 + 65350461 65350501 41 ATCATACAGAGAGTTCCACTCAGCGGGAAGAACTCCTCCAA ATCATACAGAGAGTTCCACTCAGCTGGAAGAACTCCTCCAA < 41bp 1 0.72953105249669 1 0.942158222198486 experiment 0.54093789500662 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERBIN ENSG00000112851 CDS Human protein_coding chr5:65350481 chr5:65350485 synonymous SNV . 0 25 hm5C_associated_SNPs_20280 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65350427-65350528
64251 chr10 62547923 62547923 1 + A T COAD 62547929 + 62547909 62547949 41 ATGACAAAGGAACAATTAAACTGGCTGATTTTGGCCTTGCC ATGACAAAGGAACATTTAAACTGGCTGATTTTGGCCTTGCC < 41bp 1 0.792435378869003 1 0.209714561700821 experiment 0.415129242261994 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDK1 ENSG00000170312 CDS Human protein_coding chr10:62547929 chr10:62547923 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_20281 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:62547820-62547940
64251 chr14 35739797 35739797 1 + T C COAD 35739796 + 35739776 35739816 41 TTTCCAGGATCAAAACTAACCTTTCAGGTAATGGTACCTGT TTTCCAGGATCAAAACTAACCCTTCAGGTAATGGTACCTGT < 41bp 1 0.0286463761703007 1 0.0645766854286194 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35739796 chr14:35739797 nonsynonymous SNV 0.757 1 22 hm5C_associated_SNPs_20283 0 0 6 GRWD1 POSTAR2 ENCODE chr14:35739744-35739810
64251 chr2 238944554 238944554 1 + A G COAD 238944540 + 238944520 238944560 41 ATCTTTTGAATTTTGATGATCCACTGAATATTGAAGCTGCA ATCTTTTGAATTTTGATGATCCACTGAATATTGAGGCTGCA < 41bp 1 0.102883303471584 1 0.0441645383834839 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE2F ENSG00000184182;ENSG00000258984 CDS Human other chr2:238944540 chr2:238944554 synonymous SNV . 0 35 hm5C_associated_SNPs_20284 0 0 4 BUD13 POSTAR2 ENCODE chr2:238944530-238944586
64251 chr1 36028881 36028881 1 + G A COAD 36028874 + 36028854 36028894 41 GATCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGT GATCCTGATCAAGGAAGGGGCCCCCTCACTTCTGTGCAAGT < 41bp 1 0.0528160344274274 1 0.108620882034302 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028874 chr1:36028881 synonymous SNV . 0 28 hm5C_associated_SNPs_20285 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:36028880-36028900
64251 chr1 36028881 36028881 1 + G A COAD 36028876 + 36028856 36028896 41 TCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGTAT TCCTGATCAAGGAAGGGGCCCCCTCACTTCTGTGCAAGTAT < 41bp 1 0.0184048387446868 1 0.0658325552940369 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028876 chr1:36028881 synonymous SNV . 0 26 hm5C_associated_SNPs_20286 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:36028880-36028900
64251 chr17 37070664 37070664 1 + C T COAD 37070657 + 37070637 37070677 41 GGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC GGAGCCAGAGCGTCGGGATTCACAGGATGGCAGCAGCTACC < 41bp 1 0.764515209997049 1 0.263450145721436 experiment 0.470969580005903 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070657 chr17:37070664 synonymous SNV . 0 28 hm5C_associated_SNPs_20287 0 0 7 DGCR8 POSTAR2 ENCODE chr17:37070654-37070690
64251 chr12 104340404 104340404 1 + C T COAD 104340419 + 104340399 104340439 41 CTATGCGAGTCAGAAGAAAACATTTGAAATTAATCCCAGAC CTATGTGAGTCAGAAGAAAACATTTGAAATTAATCCCAGAC < 41bp 1 0.107311617177927 1 0.223862409591675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340419 chr12:104340404 nonsynonymous SNV 0.944 2 6 hm5C_associated_SNPs_20288 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr12:104340397-104340459
64251 chr5 76355504 76355504 1 + C T COAD 76355496 + 76355476 76355516 41 TCCAAAATATAAAGATAGAGCTGGAAAACGTAGGGAGCAGG TCCAAAATATAAAGATAGAGCTGGAAAATGTAGGGAGCAGG < 41bp 1 0.750457276898992 1 0.430005520582199 experiment 0.499085446202015 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76355496 chr5:76355504 nonsynonymous SNV 0.991 4 29 hm5C_associated_SNPs_20290 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:76355495-76355519
64251 chr5 76355504 76355504 1 + C T COAD 76355513 + 76355493 76355533 41 GAGCTGGAAAACGTAGGGAGCAGGTTGGAAGTGAAGGAACT GAGCTGGAAAATGTAGGGAGCAGGTTGGAAGTGAAGGAACT < 41bp 1 0.378704782602793 1 0.315804660320282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76355513 chr5:76355504 nonsynonymous SNV 0.991 4 12 hm5C_associated_SNPs_20291 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:76355495-76355519
64251 chr15 69729055 69729055 1 + A G COAD 69729054 + 69729034 69729074 41 ATGATGATTGATGAGTTTAACAAACAATGTAAGGGCAAAAC ATGATGATTGATGAGTTTAACGAACAATGTAAGGGCAAAAC < 41bp 1 0.227814695618642 1 0.477668404579163 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69729054 chr15:69729055 nonsynonymous SNV 0.355 1 22 hm5C_associated_SNPs_20292 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:69729027-69729055
64251 chr12 94072705 94072705 1 + G A COAD 94072701 + 94072681 94072721 41 TCAATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTG TCAATGCTCAAACCACAGGCCTCCAGAAAACAATGCTCCTG < 41bp 1 0.672049717243772 1 0.927177786827087 experiment 0.655900565512456 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072701 chr12:94072705 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_20293 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr12 94072705 94072705 1 + G A COAD 94072703 + 94072683 94072723 41 AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT AATGCTCAAACCACAGGCCTCCAGAAAACAATGCTCCTGCT < 41bp 1 0.504743930704763 1 0.294438898563385 experiment 0.990512138590473 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072703 chr12:94072705 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_20294 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr17 27011893 27011893 1 + G T COAD 27011913 + 27011893 27011933 41 GGTGAAGGAGAAGTGACAGACTTCCTTCGACTGCCCCATTT TGTGAAGGAGAAGTGACAGACTTCCTTCGACTGCCCCATTT < 41bp 1 0.354211639997321 1 0.0717877447605133 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011913 chr17:27011893 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_20295 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:27011864-27011903
64251 chr14 56079139 56079139 1 + C T COAD 56079153 + 56079133 56079173 41 CCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATC CCTGTGTTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATC < 41bp 1 0.57087041252685 1 0.0694092214107513 experiment 0.8582591749463 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56079153 chr14:56079139 nonsynonymous SNV 0.051 1 7 hm5C_associated_SNPs_20296 0 0 2 HNRNPU POSTAR2 GSE34491,GSM850170 chr14:56079120-56079140
64251 chr2 202141605 202141605 1 + T C COAD 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTGTCTGATCACCAACAATCA < 41bp 1 0.24630830274723 1 0.152496874332428 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141605 nonsynonymous SNV 0.989 3 32 hm5C_associated_SNPs_20297 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:202141587-202141622
64251 chr5 65321796 65321796 1 + G A COAD 65321797 + 65321777 65321817 41 ATAATTACTTACAGCAGTTGCCCCCAGAGGTAATGTATTTT ATAATTACTTACAGCAGTTACCCCCAGAGGTAATGTATTTT < 41bp 1 0.0523851579764549 1 0.0542656779289246 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65321797 chr5:65321796 synonymous SNV . 0 20 hm5C_associated_SNPs_20298 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:65321759-65321796
64251 chr11 64802605 64802605 1 + G A COAD 64802597 + 64802577 64802617 41 TCCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGAC TCCTGCCACCCCCTCTGATCCCCACCCCACCCCCTGATGAC < 41bp 1 0.100900695547811 1 0.045934796333313 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802597 chr11:64802605 synonymous SNV . 0 29 hm5C_associated_SNPs_20303 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802598 + 64802578 64802618 41 CCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACC CCTGCCACCCCCTCTGATCCCCACCCCACCCCCTGATGACC < 41bp 1 0.0777654666138144 1 0.170918166637421 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802598 chr11:64802605 synonymous SNV . 0 28 hm5C_associated_SNPs_20304 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802599 + 64802579 64802619 41 CTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCC CTGCCACCCCCTCTGATCCCCACCCCACCCCCTGATGACCC < 41bp 1 0.202712787404237 1 0.2653848528862 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802599 chr11:64802605 synonymous SNV . 0 27 hm5C_associated_SNPs_20305 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802601 + 64802581 64802621 41 GCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCC GCCACCCCCTCTGATCCCCACCCCACCCCCTGATGACCCCC < 41bp 1 0.282346287865061 1 0.576901078224182 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802601 chr11:64802605 synonymous SNV . 0 25 hm5C_associated_SNPs_20306 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802602 + 64802582 64802622 41 CCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCG CCACCCCCTCTGATCCCCACCCCACCCCCTGATGACCCCCG < 41bp 1 0.0536135867129301 1 0.579707980155945 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802602 chr11:64802605 synonymous SNV . 0 24 hm5C_associated_SNPs_20307 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802603 + 64802583 64802623 41 CACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGG CACCCCCTCTGATCCCCACCCCACCCCCTGATGACCCCCGG < 41bp 1 0.0926727625896077 1 0.535406112670898 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802603 chr11:64802605 synonymous SNV . 0 23 hm5C_associated_SNPs_20308 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802605 64802605 1 + G A COAD 64802604 + 64802584 64802624 41 ACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGGC ACCCCCTCTGATCCCCACCCCACCCCCTGATGACCCCCGGC < 41bp 1 0.197577854980612 1 0.46421292424202 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802604 chr11:64802605 synonymous SNV . 0 22 hm5C_associated_SNPs_20309 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr19 21301012 21301012 1 + T C COAD 21300992 + 21300972 21301012 41 TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACC < 41bp 1 0.295197106047606 1 0.10282889008522 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300992 chr19:21301012 synonymous SNV . 0 41 hm5C_associated_SNPs_20310 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301012 21301012 1 + T C COAD 21300996 + 21300976 21301016 41 GCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGA GCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACCTTGA < 41bp 1 0.202515561357639 1 0.0566995143890381 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300996 chr19:21301012 synonymous SNV . 0 37 hm5C_associated_SNPs_20311 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301012 21301012 1 + T C COAD 21300997 + 21300977 21301017 41 CAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGAG CAGGGCATGGTGGCTCATGCCTGTAATCCCAACACCTTGAG < 41bp 1 0.652581207702317 1 0.0907196402549744 experiment 0.694837584595365 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300997 chr19:21301012 synonymous SNV . 0 36 hm5C_associated_SNPs_20312 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301012 21301012 1 + T C COAD 21301004 + 21300984 21301024 41 TGGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTA TGGTGGCTCATGCCTGTAATCCCAACACCTTGAGAGGACTA < 41bp 1 0.465025209102292 1 0.182626783847809 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301004 chr19:21301012 synonymous SNV . 0 29 hm5C_associated_SNPs_20313 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301012 21301012 1 + T C COAD 21301005 + 21300985 21301025 41 GGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAG GGTGGCTCATGCCTGTAATCCCAACACCTTGAGAGGACTAG < 41bp 1 0.0718218381280524 1 0.160542517900467 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301005 chr19:21301012 synonymous SNV . 0 28 hm5C_associated_SNPs_20314 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301012 21301012 1 + T C COAD 21301006 + 21300986 21301026 41 GTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAGG GTGGCTCATGCCTGTAATCCCAACACCTTGAGAGGACTAGG < 41bp 1 0.589978526125787 1 0.306941360235214 experiment 0.820042947748426 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301006 chr19:21301012 synonymous SNV . 0 27 hm5C_associated_SNPs_20315 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chrX 47518322 47518322 1 - G A COAD 47518340 - 47518320 47518360 41 GGTCTTCCCCCTCCCCACTCCCCAGGAGCCCATCATGGCGA GGTCTTCCCCCTCCCCACTCCCCAGGAGCCCATCATGGTGA < 41bp 1 0.426815257173605 1 0.511027812957764 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UXT ENSG00000126756 CDS Human protein_coding chrX:47518340 chrX:47518322 nonsynonymous SNV 0.999 1 39 hm5C_associated_SNPs_20316 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47518309-47518337
64251 chr14 35579797 35579797 1 - T C COAD 35579783 - 35579763 35579803 41 ATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAA ATTAAGGGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAA < 41bp 1 0.216949184499864 1 0.126964718103409 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP2R3C ENSG00000092020 CDS Human protein_coding chr14:35579783 chr14:35579797 synonymous SNV . 0 7 hm5C_associated_SNPs_20317 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr14:35579778-35579799
64251 chr22 19492973 19492973 1 + G A COAD 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CGGAACGAGGATGAGGAGAACACACTCTCCATGGACTGCAC < 41bp 1 0.42057121455218 1 0.100354731082916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492973 nonsynonymous SNV 0.320 2 31 hm5C_associated_SNPs_20318 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:19492949-19492978
64251 chr17 18167942 18167942 1 + G A COAD 18167953 + 18167933 18167973 41 TGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TGCTCATCGACAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC < 41bp 1 0.583727370733532 1 0.867772936820984 experiment 0.832545258532937 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167953 chr17:18167942 nonsynonymous SNV 0.449 0 10 hm5C_associated_SNPs_20319 0 0 2 RBM15 POSTAR2 ENCODE chr17:18167917-18167948
64251 chr16 4902929 4902929 1 + C T COAD 4902930 + 4902910 4902950 41 TTGGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTC TTGGTAGCCATGTCGGAGCTCCACAGGGTCCAGTTCACCTC < 41bp 1 0.435906320574566 1 0.417858600616455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN1 ENSG00000118900 CDS Human protein_coding chr16:4902930 chr16:4902929 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_20320 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:4902888-4902937
64251 chr21 45736382 45736382 1 + C T COAD 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGATGCCCTCTGCCTTCGACCGGATC < 41bp 1 0.0818261014507796 1 0.0711767077445984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736382 nonsynonymous SNV 0.394 4 19 hm5C_associated_SNPs_20321 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736382 45736382 1 + C T COAD 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGATGCCCTCTGCCTTCGACCGGATCC < 41bp 1 0.114063583481054 1 0.0476594567298889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736382 nonsynonymous SNV 0.394 4 18 hm5C_associated_SNPs_20322 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736382 45736382 1 + C T COAD 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGATGCCCTCTGCCTTCGACCGGATCCT < 41bp 1 0.428704248943339 1 0.265622556209564 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736382 nonsynonymous SNV 0.394 4 17 hm5C_associated_SNPs_20323 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr17 79414120 79414120 1 + C T COAD 79414114 + 79414094 79414134 41 GGCCTGGGCTTCTCCCTACCCTCAGACGTGCACTCTTCTAA GGCCTGGGCTTCTCCCTACCCTCAGATGTGCACTCTTCTAA < 41bp 1 0.398886823535925 1 0.411034524440765 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79414114 chr17:79414120 synonymous SNV . 0 27 hm5C_associated_SNPs_20324 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:79414118-79414193
64251 chr2 47205968 47205968 1 + G A COAD 47205958 + 47205938 47205978 41 ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT ATAACAGCACGTCGAGGCATCTGAAAGGCTATCACCCGCTT < 41bp 1 0.611246755052652 1 0.854187488555908 experiment 0.777506489894697 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47205958 chr2:47205968 nonsynonymous SNV 0.010 0 31 hm5C_associated_SNPs_20325 0 0 2 PPIG POSTAR2 ENCODE chr2:47205961-47206048
64251 chr2 113332840 113332840 1 + G A COAD 113332847 + 113332827 113332867 41 GAGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGGAAGC GAGAGGTTATATAATGGCATCAGTGGGCTAGAACTGGAAGC < 41bp 1 0.259938935183819 1 0.453829765319824 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113332847 chr2:113332840 nonsynonymous SNV 0.994 4 14 hm5C_associated_SNPs_20326 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:113332792-113332871
64251 chr17 38318158 38318158 1 + C T COAD 38318147 + 38318127 38318167 41 GCACTGTGACTGGAGAGAGGCAAAGTGGGGACGGACAGGTT GCACTGTGACTGGAGAGAGGCAAAGTGGGGATGGACAGGTT < 41bp 1 0.576089849889054 1 0.74694299697876 experiment 0.847820300221893 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318147 chr17:38318158 synonymous SNV . 0 32 hm5C_associated_SNPs_20327 0 0 14 AARS POSTAR2 ENCODE chr17:38318067-38318165
64251 chr13 115090562 115090562 1 + G A COAD 115090577 + 115090557 115090597 41 CCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC CCAGTATCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC < 41bp 1 0.248976956711225 1 0.234985828399658 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090577 chr13:115090562 synonymous SNV . 0 6 hm5C_associated_SNPs_20328 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr19 42793140 42793140 1 + T C COAD 42793148 + 42793128 42793168 41 GCTACACACAGTTGGGGGACCTGGCTCAGCCCGGCCCCGAG GCTACACACAGTCGGGGGACCTGGCTCAGCCCGGCCCCGAG < 41bp 1 0.614506594247959 1 0.845488011837006 experiment 0.770986811504083 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIC ENSG00000079432 CDS Human protein_coding chr19:42793148 chr19:42793140 synonymous SNV . 0 13 hm5C_associated_SNPs_20331 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42793127-42793153
64251 chr4 6925431 6925431 1 + C T COAD 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGTGCGC < 41bp 1 0.0209833588063879 1 0.0247748494148254 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925431 synonymous SNV . 0 37 hm5C_associated_SNPs_20332 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr20 32665039 32665039 1 + C T COAD 32665025 + 32665005 32665045 41 ACGACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAA ACGACGGCGATGAGGAAGGGCTCCTGACACACAGTGAGGAA < 41bp 1 0.526738015212847 1 0.204658627510071 experiment 0.946523969574305 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665025 chr20:32665039 synonymous SNV . 0 35 hm5C_associated_SNPs_20333 0 0 3 DDX24 POSTAR2 ENCODE chr20:32664906-32665040
64251 chr20 32665039 32665039 1 + C T COAD 32665027 + 32665007 32665047 41 GACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAAGA GACGGCGATGAGGAAGGGCTCCTGACACACAGTGAGGAAGA < 41bp 1 0.525806496887512 1 0.130016654729843 experiment 0.948387006224977 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665027 chr20:32665039 synonymous SNV . 0 33 hm5C_associated_SNPs_20334 0 0 3 DDX24 POSTAR2 ENCODE chr20:32664906-32665040
64251 chr20 32665039 32665039 1 + C T COAD 32665034 + 32665014 32665054 41 ATGAGGAAGGGCTCCTGACACACAGCGAGGAAGAGCTGGTG ATGAGGAAGGGCTCCTGACACACAGTGAGGAAGAGCTGGTG < 41bp 1 0.788992938446317 1 0.307323843240738 experiment 0.422014123107366 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665034 chr20:32665039 synonymous SNV . 0 26 hm5C_associated_SNPs_20335 0 0 3 DDX24 POSTAR2 ENCODE chr20:32664906-32665040
64251 chr20 32665039 32665039 1 + C T COAD 32665036 + 32665016 32665056 41 GAGGAAGGGCTCCTGACACACAGCGAGGAAGAGCTGGTGAG GAGGAAGGGCTCCTGACACACAGTGAGGAAGAGCTGGTGAG < 41bp 1 0.697211950338757 1 0.410638839006424 experiment 0.605576099322487 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665036 chr20:32665039 synonymous SNV . 0 24 hm5C_associated_SNPs_20336 0 0 3 DDX24 POSTAR2 ENCODE chr20:32664906-32665040
64251 chr3 52237926 52237926 1 + G A COAD 52237938 + 52237918 52237958 41 TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAAGAAC TGAAAACCAATGGAGGGGATCCCAGTGGACTGCTGAAGAAC < 41bp 1 0.310895163737215 1 0.156965434551239 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52237938 chr3:52237926 nonsynonymous SNV 0.190 1 9 hm5C_associated_SNPs_20337 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52237899-52237929
64251 chr12 49888628 49888628 1 + C T COAD 49888623 + 49888603 49888643 41 TTCAAGAGGAACAGTCTGCGCCTTCCTCAGAGAAAGGTGGT TTCAAGAGGAACAGTCTGCGCCTTCTTCAGAGAAAGGTGGT < 41bp 1 0.0176944499871742 1 0.087238997220993 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888623 chr12:49888628 synonymous SNV . 0 26 hm5C_associated_SNPs_20338 0 0 1 PPIG POSTAR2 ENCODE chr12:49888593-49888651
64251 chr15 57554304 57554304 1 + C T COAD 57554318 + 57554298 57554338 41 ACTCATCGGGAAGACTCTGTCAGTCTCAATGGCAATCATTC ACTCATTGGGAAGACTCTGTCAGTCTCAATGGCAATCATTC < 41bp 1 0.207275055842216 1 0.258539855480194 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554318 chr15:57554304 nonsynonymous SNV 0.998 3 7 hm5C_associated_SNPs_20341 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:57554296-57554319
64251 chr4 144336813 144336813 1 + G T COAD 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTGAAAACAGCTACATTTTTTATATCAACAC < 41bp 1 0.563073982691976 1 0.340096592903137 experiment 0.873852034616047 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336813 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_20342 0 0 1 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chr13 27216439 27216439 1 + G A COAD 27216436 + 27216416 27216456 41 AGTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAG AGTGAAGAGGAACATTGAGCCCCAGCACTTGTGCCGGGGAG < 41bp 1 0.286057327431301 1 0.411589354276657 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216436 chr13:27216439 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_20343 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216439 27216439 1 + G A COAD 27216437 + 27216417 27216457 41 GTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGC GTGAAGAGGAACATTGAGCCCCAGCACTTGTGCCGGGGAGC < 41bp 1 0.137904988470083 1 0.496980339288712 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216437 chr13:27216439 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_20344 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216439 27216439 1 + G A COAD 27216438 + 27216418 27216458 41 TGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCT TGAAGAGGAACATTGAGCCCCAGCACTTGTGCCGGGGAGCT < 41bp 1 0.514121038360233 1 0.475714147090912 experiment 0.971757923279533 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216438 chr13:27216439 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_20345 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216439 27216439 1 + G A COAD 27216441 + 27216421 27216461 41 AGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCTCTG AGAGGAACATTGAGCCCCAGCACTTGTGCCGGGGAGCTCTG < 41bp 1 0.269299401409525 1 0.0953908264636993 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216441 chr13:27216439 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_20346 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216439 27216439 1 + G A COAD 27216450 + 27216430 27216470 41 TTGAGCCCCGGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG TTGAGCCCCAGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG < 41bp 1 0.714594175706776 1 0.870404481887817 experiment 0.570811648586448 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216450 chr13:27216439 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_20347 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr17 79668137 79668137 1 + G A COAD 79668148 + 79668128 79668168 41 CTACATCGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC CTACATCGCAGGGCAGCAGCCCATGTACCAGCAGGTGAGCC < 41bp 1 0.176704058211066 1 0.35558420419693 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79668148 chr17:79668137 synonymous SNV . 0 10 hm5C_associated_SNPs_20348 0 0 3 DDX24 POSTAR2 ENCODE chr17:79668104-79668161
64251 chrX 70517238 70517238 1 + C T COAD 70517240 + 70517220 70517260 41 TTTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGAT TTTTTAGATTTGATGAGGTGCCAAGAAGAACTTCGGAGGAT < 41bp 1 0.156609704190935 1 0.209668815135956 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517240 chrX:70517238 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_20350 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517238 70517238 1 + C T COAD 70517241 + 70517221 70517261 41 TTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGATG TTTTAGATTTGATGAGGTGCCAAGAAGAACTTCGGAGGATG < 41bp 1 0.786247910068836 1 0.401810109615326 experiment 0.427504179862327 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517241 chrX:70517238 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_20351 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517238 70517238 1 + C T COAD 70517253 + 70517233 70517273 41 TGAGGCGCCAAGAAGAACTTCGGAGGATGGAAGAGCTGCAC TGAGGTGCCAAGAAGAACTTCGGAGGATGGAAGAGCTGCAC < 41bp 1 0.66215627730128 1 0.837612211704254 experiment 0.675687445397441 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517253 chrX:70517238 nonsynonymous SNV 0.998 2 6 hm5C_associated_SNPs_20352 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chr11 73068163 73068163 1 + C T COAD 73068165 + 73068145 73068185 41 AAGTCAGGCTCCCTGCGGCGCAGCTCCATGAGCCTGTGAGT AAGTCAGGCTCCCTGCGGTGCAGCTCCATGAGCCTGTGAGT < 41bp 1 0.110406832491195 1 0.0318382978439331 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73068165 chr11:73068163 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_20353 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73068081-73068182
64251 chr12 112926260 112926260 1 + C T COAD 112926274 + 112926254 112926294 41 ATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT ATTGGCTGGACAGGGACGTTCATTGTGATTGATATTCTTAT < 41bp 1 0.147707421963071 1 0.022661954164505 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926274 chr12:112926260 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_20354 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112926227-112926265
64251 chr3 10123065 10123065 1 + A G COAD 10123048 + 10123028 10123068 41 AGTGTTTAGCTGCTGAGAATCACGGTGTAGTTGATGGACCA AGTGTTTAGCTGCTGAGAATCACGGTGTAGTTGATGGGCCA < 41bp 1 0.687113329835146 1 0.851265788078308 experiment 0.625773340329707 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10123048 chr3:10123065 synonymous SNV . 0 38 hm5C_associated_SNPs_20355 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10123029-10123103
64251 chr19 38780810 38780810 1 + G A COAD 38780801 + 38780781 38780821 41 CACTGGGCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTG CACTGGGCCTTGCCGTGCATCCTTCCCACACTGGTACTTTG < 41bp 1 0.0149712939339739 1 0.0782611966133118 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780801 chr19:38780810 nonsynonymous SNV 0.981 4 30 hm5C_associated_SNPs_20357 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chr1 39876796 39876796 1 + A G COAD 39876777 + 39876757 39876797 41 AAGCAGCACCCCCTTGGGGACACAGCCTGCACTGTGGAAAT AAGCAGCACCCCCTTGGGGACACAGCCTGCACTGTGGAAGT < 41bp 1 0.117237115331198 1 0.154233306646347 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA0754 ENSG00000255103 CDS Human other chr1:39876777 chr1:39876796 nonsynonymous SNV 0.990 0 40 hm5C_associated_SNPs_20358 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:39876794-39876826
64251 chr19 36594064 36594064 1 + G T COAD 36594068 + 36594048 36594088 41 GTGCCTGCAGGTCCTCGCTGCAGGGAAGGCTGAAGAGACCC GTGCCTGCAGGTCCTCTCTGCAGGGAAGGCTGAAGAGACCC < 41bp 1 0.65206291861407 1 0.85818076133728 experiment 0.695874162771861 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36594068 chr19:36594064 nonsynonymous SNV 0.015 0 17 hm5C_associated_SNPs_20359 0 0 1 SF3B4 POSTAR2 ENCODE chr19:36594058-36594109
64251 chr7 150761824 150761824 1 + G A COAD 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCATC < 41bp 1 0.55175495202526 1 0.439953625202179 experiment 0.896490095949479 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761824 synonymous SNV . 0 39 hm5C_associated_SNPs_20360 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150761819-150761848
64251 chr19 11141504 11141504 1 + C T COAD 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGGGTTCGGCCTGAACCTCCAGTCGGC < 41bp 1 0.46091602095854 1 0.742279052734375 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141504 nonsynonymous SNV 0.981 4 19 hm5C_associated_SNPs_20361 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chr16 1818241 1818241 1 + G T COAD 1818253 + 1818233 1818273 41 CCCGTCCCGGGGGCATCATCCACGTGTATGGCGATGACAGC CCCGTCCCTGGGGCATCATCCACGTGTATGGCGATGACAGC < 41bp 1 0.472304644992073 1 0.62525337934494 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818253 chr16:1818241 nonsynonymous SNV 0.834 4 9 hm5C_associated_SNPs_20362 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1818228-1818255
64251 chr1 16199455 16199455 1 + G A COAD 16199454 + 16199434 16199474 41 GGGTGACAGAGACCTACGCACGGATTATAATGAACCAGGCA GGGTGACAGAGACCTACGCACAGATTATAATGAACCAGGCA < 41bp 1 0.163464771828956 1 0.353526949882507 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199454 chr1:16199455 synonymous SNV . 0 22 hm5C_associated_SNPs_20365 0 0 18 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16199300-16199620
64251 chr8 145736255 145736255 1 + G A COAD 145736271 + 145736251 145736291 41 ATGCGCTGCAGCCAGCTGGCCCCCAGGGCCCTGCAGGTGAG ATGCACTGCAGCCAGCTGGCCCCCAGGGCCCTGCAGGTGAG < 41bp 1 0.375765449953392 1 0.324513167142868 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736271 chr8:145736255 nonsynonymous SNV 0.990 0 5 hm5C_associated_SNPs_20366 0 0 3 PPIG POSTAR2 ENCODE chr8:145736225-145736286
64251 chr16 67662323 67662323 1 + C T COAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCGGGGAGAAGCCTTATGCCTGCAGCCACTGCG < 41bp 1 0.348657291776566 1 0.113494962453842 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662323 synonymous SNV . 0 25 hm5C_associated_SNPs_20367 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr9 131247109 131247109 1 + C T COAD 131247090 + 131247070 131247110 41 AAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCG AAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGTG < 41bp 1 0.170690928195931 1 0.153223872184753 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247090 chr9:131247109 stopgain 1.000 1 40 hm5C_associated_SNPs_20368 0 0 8 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr9 131247109 131247109 1 + C T COAD 131247094 + 131247074 131247114 41 AGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCC AGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGTGAGCC < 41bp 1 0.337286493469185 1 0.421514242887497 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247094 chr9:131247109 stopgain 1.000 1 36 hm5C_associated_SNPs_20369 0 0 8 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr10 51863874 51863874 1 + G A COAD 51863880 + 51863860 51863900 41 AGCTCCCCACGTTGGTTTCCCTGTTTGATGATGAAGATGAA AGCTCCCCACGTTGATTTCCCTGTTTGATGATGAAGATGAA < 41bp 1 0.126735141358839 1 0.0665976703166962 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASHC2A ENSG00000099290 CDS Human protein_coding chr10:51863880 chr10:51863874 nonsynonymous SNV 0.285 1 15 hm5C_associated_SNPs_20370 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:51863828-51863886
64251 chr16 30664136 30664136 1 + G A COAD 30664142 + 30664122 30664162 41 TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA TGCCTCGCCACCCCAGCAGGCCGGGTGGTCCTCGCAGGCCA < 41bp 1 0.701180482601629 1 0.555185496807098 experiment 0.597639034796742 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664142 chr16:30664136 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_20373 0 0 3 PPIG POSTAR2 ENCODE chr16:30664094-30664159
64251 chr14 23794460 23794460 1 + C T COAD 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCTGGGCTAGAGCGACATCATG < 41bp 1 0.468807333832895 1 0.126746952533722 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794460 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_20374 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr12 551007 551007 1 + G A COAD 551010 + 550990 551030 41 CCGTGACAGCAATAGACGGGCACATAAGATACAAGGAGAAC CCGTGACAGCAATAGACAGGCACATAAGATACAAGGAGAAC < 41bp 1 0.32901086987511 1 0.121663391590118 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC77 ENSG00000120647 CDS Human protein_coding chr12:551010 chr12:551007 nonsynonymous SNV 0.953 2 18 hm5C_associated_SNPs_20375 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:550999-551034
64251 chr17 78090772 78090772 1 + C A COAD 78090785 + 78090765 78090805 41 AGGTTCCCCAAGGACTCTAGCACCTGGACTGTGGACCACCA AGGTTCCACAAGGACTCTAGCACCTGGACTGTGGACCACCA < 41bp 1 0.418339952281631 1 0.141388833522797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78090785 chr17:78090772 nonsynonymous SNV 0.450 5 8 hm5C_associated_SNPs_20376 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78090769-78090807
64251 chr11 45882546 45882546 1 + C T COAD 45882565 + 45882545 45882585 41 ACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT ATGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT < 41bp 1 0.0251669975465308 1 0.0463276505470276 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882565 chr11:45882546 synonymous SNV . 0 2 hm5C_associated_SNPs_20378 0 0 3 GRWD1 POSTAR2 ENCODE chr11:45882466-45882594
64251 chr11 45882546 45882546 1 + C T COAD 45882566 + 45882546 45882586 41 CGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG TGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG < 41bp 1 0.0451407054253739 1 0.052418977022171 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882566 chr11:45882546 synonymous SNV . 0 1 hm5C_associated_SNPs_20379 0 0 3 GRWD1 POSTAR2 ENCODE chr11:45882466-45882594
64251 chr17 78079646 78079646 1 + G T COAD 78079642 + 78079622 78079662 41 ACTCTACAGCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGA ACTCTACAGCGTGGAGTTCTCCGATGAGCCCTTCGGGGTGA < 41bp 1 0.656459040459782 1 0.651852548122406 experiment 0.687081919080436 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GAA ENSG00000171298 CDS Human protein_coding chr17:78079642 chr17:78079646 nonsynonymous SNV 0.962 1 25 hm5C_associated_SNPs_20380 0 0 2 NOL12 POSTAR2 ENCODE chr17:78079631-78079690
64251 chr7 72409183 72409183 1 + C T COAD 72409185 + 72409165 72409205 41 TCTAGCCCAGCCTCCTCCCGCTCCCAGACACCGGAGAGGCC TCTAGCCCAGCCTCCTCCTGCTCCCAGACACCGGAGAGGCC < 41bp 1 0.0969434426188042 1 0.140928268432617 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POM121 ENSG00000196313 CDS Human protein_coding chr7:72409185 chr7:72409183 nonsynonymous SNV 0.841 0 19 hm5C_associated_SNPs_20381 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:72409151-72409183
64251 chr16 56867237 56867237 1 + C T COAD 56867224 + 56867204 56867244 41 GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCA GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGTGCTGCCA < 41bp 1 0.471000918657349 1 0.299403160810471 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867224 chr16:56867237 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_20382 0 0 4 FMR1 POSTAR2 ENCODE chr16:56867217-56867272
64251 chr11 64022440 64022440 1 + T C COAD 64022456 + 64022436 64022476 41 ACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTT ACGGCGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTT < 41bp 1 0.363774620565953 1 0.0838344693183899 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022456 chr11:64022440 nonsynonymous SNV 0.994 3 5 hm5C_associated_SNPs_20383 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64022427-64022450
64251 chr11 64022440 64022440 1 + T C COAD 64022457 + 64022437 64022477 41 CGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTG CGGCGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTG < 41bp 1 0.328854510332004 1 0.538246393203735 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022457 chr11:64022440 nonsynonymous SNV 0.994 3 4 hm5C_associated_SNPs_20384 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64022427-64022450
64251 chr11 64022440 64022440 1 + T C COAD 64022458 + 64022438 64022478 41 GGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGA GGCGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTTGA < 41bp 1 0.597332201055009 1 0.796933710575104 experiment 0.805335597889982 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022458 chr11:64022440 nonsynonymous SNV 0.994 3 3 hm5C_associated_SNPs_20385 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64022427-64022450
64251 chr19 17424898 17424898 1 + G A COAD 17424890 + 17424870 17424910 41 CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGCCT CAATTTTAGTCGATTTCACGCGGACTCCATGTGCAAAGCCT < 41bp 1 0.200047409533456 1 0.180500090122223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424890 chr19:17424898 nonsynonymous SNV 0.923 0 29 hm5C_associated_SNPs_20386 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:17424875-17424904
64251 chr3 14508088 14508088 1 + C T COAD 14508078 + 14508058 14508098 41 TGCTCCTGGTGCTGCTGGTCCGAGGGCTGACGCTGCCGGGC TGCTCCTGGTGCTGCTGGTCCGAGGGCTGATGCTGCCGGGC < 41bp 1 0.798882694241657 1 0.954917550086975 experiment 0.402234611516685 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14508078 chr3:14508088 nonsynonymous SNV 0.852 3 31 hm5C_associated_SNPs_20387 0 0 6 DDX24 POSTAR2 ENCODE chr3:14508047-14508118
64251 chr16 30664157 30664157 1 + A C COAD 30664142 + 30664122 30664162 41 TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCCGGCCA < 41bp 1 0.736358444115396 1 0.747065365314484 experiment 0.527283111769208 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664142 chr16:30664157 nonsynonymous SNV 0.296 1 36 hm5C_associated_SNPs_20391 0 0 2 PPIG POSTAR2 ENCODE chr16:30664094-30664159
64251 chr10 104140384 104140384 1 + G A COAD 104140373 + 104140353 104140393 41 CCCTCGGCCCTCTGGGAGATCACCTGGGAACGCATTGACTG CCCTCGGCCCTCTGGGAGATCACCTGGGAACACATTGACTG < 41bp 1 0.449014424534666 1 0.0903272926807404 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104140373 chr10:104140384 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_20397 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:104140371-104140428
64251 chr1 24022311 24022311 1 + C T COAD 24022327 + 24022307 24022347 41 TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG TCAGTATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG < 41bp 1 0.772968459536555 1 0.528222978115082 experiment 0.454063080926891 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022327 chr1:24022311 synonymous SNV . 0 5 hm5C_associated_SNPs_20398 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:24022108-24022375
64251 chr7 98563362 98563362 1 + G A COAD 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACACGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT < 41bp 1 0.186986330902807 1 0.453477591276169 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563362 synonymous SNV . 0 3 hm5C_associated_SNPs_20399 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:98563359-98563383
64251 chr22 39826105 39826105 1 + C T COAD 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTCCGCTCCTGGCCCGCCCACTCGCTCCCGCCTGGCGA < 41bp 1 0.0960514361837501 1 0.175361067056656 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826105 nonsynonymous SNV 0.818 3 13 hm5C_associated_SNPs_20401 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr1 242030154 242030154 1 + G C COAD 242030150 + 242030130 242030170 41 AGCCTGCCCATTCAAGAAGTCATAGTTGGGATGACAAAACA AGCCTGCCCATTCAAGAAGTCATACTTGGGATGACAAAACA < 41bp 1 0.0899707707542036 1 0.0602223575115204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242030150 chr1:242030154 nonsynonymous SNV 0.980 0 25 hm5C_associated_SNPs_20402 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:242030140-242030160
64251 chr16 31091420 31091420 1 + C T COAD 31091428 + 31091408 31091448 41 CCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTTCCG CCCCGACGTTTCTGCTGCAGCGAGTGTGGGAAGGCCTTCCG < 41bp 1 0.701838834907849 1 0.683183073997498 experiment 0.596322330184303 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091428 chr16:31091420 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_20404 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:31091395-31091425
64251 chr9 133507350 133507350 1 + C T COAD 133507332 + 133507312 133507352 41 CTTTTACCTTTTCCCAGTACCTTTCCTCCAAGGAGCTCCGG CTTTTACCTTTTCCCAGTACCTTTCCTCCAAGGAGCTCTGG < 41bp 1 0.0501011486299542 1 0.0295866131782532 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133507332 chr9:133507350 synonymous SNV . 0 39 hm5C_associated_SNPs_20407 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:133507346-133507368
64251 chr12 62931428 62931428 1 + C T COAD 62931443 + 62931423 62931463 41 CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC CTTGGTGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC < 41bp 1 0.15719390597384 1 0.0482230484485626 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62931443 chr12:62931428 nonsynonymous SNV 0.934 3 6 hm5C_associated_SNPs_20408 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:62931396-62931430
64251 chr6 37141795 37141795 1 + G A COAD 37141808 + 37141788 37141828 41 CATGGATGCAAGATGTTCTCCTGCCCCAGGAAACTGCTGAG CATGGATACAAGATGTTCTCCTGCCCCAGGAAACTGCTGAG < 41bp 1 0.291003874152232 1 0.232919752597809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIM1 ENSG00000137193 CDS Human protein_coding chr6:37141808 chr6:37141795 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_20410 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:37141774-37141797
64251 chrX 9661224 9661224 1 + C T COAD 9661244 + 9661224 9661264 41 CGGTTTTGCAAGAATATGGACGGAAGATGGTGAGTTCTGTG TGGTTTTGCAAGAATATGGACGGAAGATGGTGAGTTCTGTG < 41bp 1 0.47554989301033 1 0.219690501689911 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBL1X ENSG00000101849 CDS Human protein_coding chrX:9661244 chrX:9661224 synonymous SNV . 0 1 hm5C_associated_SNPs_20411 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:9661220-9661240
64251 chr11 763825 763825 1 + G A COAD 763823 + 763803 763843 41 ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAA ATTGTCATGGGCGCCTCCTTCCACAACACGGGCGAGATCAA < 41bp 1 0.670849413590688 1 0.600056946277618 experiment 0.658301172818624 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:763823 chr11:763825 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_20412 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:763796-763828
64251 chr19 12923928 12923928 1 + C T COAD 12923946 + 12923926 12923966 41 CACGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTT CATGTGGAGCCTGTGTTCGGCTTCCCCCAGTTTGTCCGGTT < 41bp 1 0.134050102637272 1 0.0636387169361115 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12923946 chr19:12923928 synonymous SNV . 0 3 hm5C_associated_SNPs_20413 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr19:12923902-12923938
64251 chr3 9788110 9788110 1 + G A COAD 9788101 + 9788081 9788121 41 CCCAGGAAGCCCGAGAGCATCTCTACCTCGTCCTCTTCTTT CCCAGGAAGCCCGAGAGCATCTCTACCTCATCCTCTTCTTT < 41bp 1 0.485794678589103 1 0.281896829605103 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9788101 chr3:9788110 nonsynonymous SNV 0.995 3 30 hm5C_associated_SNPs_20414 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:9788095-9788114
64251 chr21 45217901 45217901 1 + C T COAD 45217920 + 45217900 45217940 41 GCGTCGGACAGTGATGAGTCCTCTGAGGGTGGTGAGCGTGG GTGTCGGACAGTGATGAGTCCTCTGAGGGTGGTGAGCGTGG < 41bp 1 0.367214662645675 1 0.297252178192139 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217920 chr21:45217901 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_20415 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:45217802-45217931
64251 chr7 156746891 156746891 1 + G A COAD 156746911 + 156746891 156746931 41 GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAG ACTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAG < 41bp 1 0.553597443495317 1 0.448525130748749 experiment 0.892805113009366 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746911 chr7:156746891 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_20422 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:156746871-156746892
64251 chr19 39398198 39398198 1 + G A COAD 39398207 + 39398187 39398227 41 ACCCCATCCTCGCCCGCCTCCTCCGTGCACACGGAGCCCCT ACCCCATCCTCACCCGCCTCCTCCGTGCACACGGAGCCCCT < 41bp 1 0.747495120606156 1 0.678680062294006 experiment 0.505009758787688 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398207 chr19:39398198 nonsynonymous SNV 0.991 3 12 hm5C_associated_SNPs_20423 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39398171-39398202
64251 chr1 150445677 150445677 1 + G A COAD 150445667 + 150445647 150445687 41 GCCGGAGTGGTATAATCTTACGGAGTCCCCGGCCAGACTTT GCCGGAGTGGTATAATCTTACGGAGTCCCCAGCCAGACTTT < 41bp 1 0.70511897618225 1 0.944144487380981 experiment 0.589762047635499 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445667 chr1:150445677 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_20424 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150445656-150445682
64251 chr2 113243553 113243553 1 + C T COAD 113243539 + 113243519 113243559 41 GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG GGTGAATTACTACAGGGGTGCTGACAAACTGTGTTGCAAAG < 41bp 1 0.238228025069472 1 0.190762549638748 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113243539 chr2:113243553 nonsynonymous SNV 0.998 4 35 hm5C_associated_SNPs_20425 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:113243528-113243555
64251 chr9 33917134 33917134 1 + C A COAD 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAACAGCTCAGATTTGATTTACGACGACT < 41bp 1 0.271258296956187 1 0.148366898298264 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917134 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_20426 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917134 33917134 1 + C A COAD 33917142 + 33917122 33917162 41 AGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT AGCTCAGATTTGATTTACGACGACTTGTATGATGACGACAT < 41bp 1 0.30591901745373 1 0.0392135381698608 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917142 chr9:33917134 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_20427 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917134 33917134 1 + C A COAD 33917145 + 33917125 33917165 41 TCAGATTTGCTTTACGACGACTTGTATGATGACGACATTGA TCAGATTTGATTTACGACGACTTGTATGATGACGACATTGA < 41bp 1 0.139047867671198 1 0.049559473991394 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917145 chr9:33917134 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_20428 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 72913054 72913054 1 + G A COAD 72913039 + 72913019 72913059 41 GCCCCAGATTGATGCCATTACAAATGATCTGAGACGGATTC GCCCCAGATTGATGCCATTACAAATGATCTGAGACAGATTC < 41bp 1 0.460793987533954 1 0.260173141956329 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC5 ENSG00000198887 CDS Human protein_coding chr9:72913039 chr9:72913054 nonsynonymous SNV 0.546 0 36 hm5C_associated_SNPs_20429 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:72913039-72913074
64251 chr14 105814903 105814903 1 + G A COAD 105814915 + 105814895 105814935 41 TGGTGATCGCTGTCAAGATGCAGGTGAGGCCGCTTGTGACC TGGTGATCACTGTCAAGATGCAGGTGAGGCCGCTTGTGACC < 41bp 1 0.535390550787517 1 0.592350661754608 experiment 0.929218898424967 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS2 ENSG00000179364 CDS Human protein_coding chr14:105814915 chr14:105814903 nonsynonymous SNV 0.915 3 9 hm5C_associated_SNPs_20430 0 0 7 BUD13 POSTAR2 ENCODE chr14:105814835-105814913
64251 chr2 220149398 220149398 1 + G A COAD 220149415 + 220149395 220149435 41 CGCGAGCAGCAGCCGTCAGTCACTTCCAGGTCTGGGGGCAC CGCAAGCAGCAGCCGTCAGTCACTTCCAGGTCTGGGGGCAC < 41bp 1 0.472967662138611 1 0.470569103956223 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJB2 ENSG00000135924 CDS Human protein_coding chr2:220149415 chr2:220149398 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_20431 1 0 1 PPIG POSTAR2 ENCODE chr2:220149353-220149417
64251 chr12 69082833 69082833 1 + C T COAD 69082818 + 69082798 69082838 41 CTGCACGGAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC CTGCACGGAAACAGAGTGCTCAGAAAAGAGTTTTATGTATC < 41bp 1 0.703356860684358 1 0.581282198429108 experiment 0.593286278631284 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69082818 chr12:69082833 nonsynonymous SNV 0.997 0 36 hm5C_associated_SNPs_20432 0 0 2 DDX24 POSTAR2 ENCODE chr12:69082741-69082834
64251 chr1 116940623 116940623 1 + A G COAD 116940615 + 116940595 116940635 41 GAGATAGTGTTTGCCAGGACCTCCCCTCAGCAGAAGCTCAT GAGATAGTGTTTGCCAGGACCTCCCCTCGGCAGAAGCTCAT < 41bp 1 0.256128798032654 1 0.278666526079178 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116940615 chr1:116940623 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_20434 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116940516-116940641
64251 chr3 63965704 63965704 1 + C T COAD 63965690 + 63965670 63965710 41 CAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTTCTT CAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACTGTTCTT < 41bp 1 0.36952675851814 1 0.624924182891846 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63965690 chr3:63965704 nonsynonymous SNV 0.989 2 35 hm5C_associated_SNPs_20435 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:63965704-63965705
64251 chr19 33202821 33202821 1 + C T COAD 33202807 + 33202787 33202827 41 ATATCCACGTGACTGTTCAGCCAAAGTATAAACACGTTTAT ATATCCACGTGACTGTTCAGCCAAAGTATAAACATGTTTAT < 41bp 1 0.322016100582087 1 0.122235596179962 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202807 chr19:33202821 synonymous SNV . 0 35 hm5C_associated_SNPs_20436 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33202688-33202963
64251 chr10 73039801 73039801 1 + C T COAD 73039798 + 73039778 73039818 41 CAGGAAGGCCTGGATGAGGCCACCGGTGAGCCCGCCCCACT CAGGAAGGCCTGGATGAGGCCACTGGTGAGCCCGCCCCACT < 41bp 1 0.490860943065502 1 0.13699808716774 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73039798 chr10:73039801 synonymous SNV . 0 24 hm5C_associated_SNPs_20437 0 0 1 DDX24 POSTAR2 ENCODE chr10:73039727-73039803
64251 chr2 101186042 101186042 1 + G A COAD 101186044 + 101186024 101186064 41 TCCTTGTTTTGTGCAGACGGCGGAGACTGGCTGAGTGGAAA TCCTTGTTTTGTGCAGACAGCGGAGACTGGCTGAGTGGAAA < 41bp 1 0.674998179284603 1 0.835071921348572 experiment 0.650003641430794 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101186044 chr2:101186042 nonsynonymous SNV 0.858 0 19 hm5C_associated_SNPs_20438 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:101186039-101186058
64251 chr3 39431979 39431979 1 + T C COAD 39431995 + 39431975 39432015 41 GGCCTTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG GGCCCTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG < 41bp 1 0.290093420800664 1 0.147310763597488 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431995 chr3:39431979 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_20439 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:39431944-39431979
64251 chr7 101845271 101845271 1 + C T COAD 101845280 + 101845260 101845300 41 CTGAGTCTGACCGGGGCCAGCCGCAGCGAGACACCACAGAA CTGAGTCTGACTGGGGCCAGCCGCAGCGAGACACCACAGAA < 41bp 1 0.319989314503863 1 0.486311405897141 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845280 chr7:101845271 synonymous SNV . 0 12 hm5C_associated_SNPs_20441 0 0 1 UCHL5 POSTAR2 ENCODE chr7:101845176-101845297
64251 chr5 38885488 38885488 1 + C T COAD 38885507 + 38885487 38885527 41 CCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGG CTGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGG < 41bp 1 0.364722329821229 1 0.0508376061916351 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OSMR ENSG00000145623 CDS Human protein_coding chr5:38885507 chr5:38885488 synonymous SNV . 0 2 hm5C_associated_SNPs_20443 0 0 4 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:38885478-38885496
64251 chr19 39979213 39979213 1 + C T COAD 39979223 + 39979203 39979243 41 ACGTGCGAACCGTGCTGGAGCACTATGCCCTGGAGGATGAC ACGTGCGAACTGTGCTGGAGCACTATGCCCTGGAGGATGAC < 41bp 1 0.475872043084985 1 0.10144305229187 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39979223 chr19:39979213 synonymous SNV . 0 11 hm5C_associated_SNPs_20444 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39979189-39979225
64251 chr14 104124098 104124098 1 + C T COAD 104124107 + 104124087 104124127 41 AAATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGT AAATATGATGATGACATTTCCCCATCCGTGAGTGGCTCTGT < 41bp 1 0.0922975985790376 1 0.301946014165878 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124107 chr14:104124098 synonymous SNV . 0 12 hm5C_associated_SNPs_20445 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr14 104124098 104124098 1 + C T COAD 104124108 + 104124088 104124128 41 AATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTA AATATGATGATGACATTTCCCCATCCGTGAGTGGCTCTGTA < 41bp 1 0.0439431764364009 1 0.253572583198547 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124108 chr14:104124098 synonymous SNV . 0 11 hm5C_associated_SNPs_20446 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr14 104124098 104124098 1 + C T COAD 104124112 + 104124092 104124132 41 TGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTAGCAA TGATGATGACATTTCCCCATCCGTGAGTGGCTCTGTAGCAA < 41bp 1 0.139927305269547 1 0.345561325550079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124112 chr14:104124098 synonymous SNV . 0 7 hm5C_associated_SNPs_20447 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr19 39948323 39948323 1 + G A COAD 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA AATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA < 41bp 1 0.252896781463905 1 0.164279043674469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948323 nonsynonymous SNV 0.872 3 1 hm5C_associated_SNPs_20448 0 0 34 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 1037831 1037831 1 + G T COAD 1037820 + 1037800 1037840 41 CACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCC CACAGTGGCCGATGGGGCTCCCTCGGGCACCTGCGACTGCC < 41bp 1 0.209691847256429 1 0.131156086921692 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037820 chr19:1037831 nonsynonymous SNV 0.000 3 32 hm5C_associated_SNPs_20449 0 0 2 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037831 1037831 1 + G T COAD 1037840 + 1037820 1037860 41 CCTCGGGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCT CCTCGGGCACCTGCGACTGCCCGGACCCGGGGGAGGTCCCT < 41bp 1 0.790677013068754 1 0.139668434858322 experiment 0.418645973862491 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037840 chr19:1037831 nonsynonymous SNV 0.000 3 12 hm5C_associated_SNPs_20450 0 0 2 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037831 1037831 1 + G T COAD 1037841 + 1037821 1037861 41 CTCGGGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTG CTCGGGCACCTGCGACTGCCCGGACCCGGGGGAGGTCCCTG < 41bp 1 0.662712945637177 1 0.330913305282593 experiment 0.674574108725646 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037841 chr19:1037831 nonsynonymous SNV 0.000 3 11 hm5C_associated_SNPs_20451 0 0 2 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037831 1037831 1 + G T COAD 1037845 + 1037825 1037865 41 GGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATA GGCACCTGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATA < 41bp 1 0.610590601688696 1 0.872855842113495 experiment 0.778818796622609 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037845 chr19:1037831 nonsynonymous SNV 0.000 3 7 hm5C_associated_SNPs_20452 0 0 2 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037831 1037831 1 + G T COAD 1037846 + 1037826 1037866 41 GCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATAT GCACCTGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATAT < 41bp 1 0.646129213497683 1 0.876762747764587 experiment 0.707741573004634 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037846 chr19:1037831 nonsynonymous SNV 0.000 3 6 hm5C_associated_SNPs_20453 0 0 2 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr7 45662255 45662255 1 + T C COAD 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GCTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG < 41bp 1 0.444582377458638 1 0.596491813659668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662255 synonymous SNV . 0 2 hm5C_associated_SNPs_20454 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:45662233-45662265
64251 chr12 6637242 6637242 1 + A G COAD 6637255 + 6637235 6637275 41 CTTGGCAAGTTCTGCATGATCAGGTAGGCCGTGGGGTTGGT CTTGGCAGGTTCTGCATGATCAGGTAGGCCGTGGGGTTGGT < 41bp 1 0.752587661349536 1 0.54904305934906 experiment 0.494824677300927 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637255 chr12:6637242 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_20455 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:6637223-6637243
64251 chr19 49593597 49593597 1 + G A COAD 49593585 + 49593565 49593605 41 TCCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGA TCCTCCAACTCGTGCTGAAACCCGAGAGGAGCACATGGAGA < 41bp 1 0.700198233608072 1 0.34480345249176 experiment 0.599603532783857 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593585 chr19:49593597 nonsynonymous SNV 0.997 4 33 hm5C_associated_SNPs_20456 0 0 6 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593597 49593597 1 + G A COAD 49593586 + 49593566 49593606 41 CCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGAG CCTCCAACTCGTGCTGAAACCCGAGAGGAGCACATGGAGAG < 41bp 1 0.479167208578751 1 0.726839482784271 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593586 chr19:49593597 nonsynonymous SNV 0.997 4 32 hm5C_associated_SNPs_20457 0 0 6 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593597 49593597 1 + G A COAD 49593596 + 49593576 49593616 41 GTGCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGT GTGCTGAAACCCGAGAGGAGCACATGGAGAGGAAAGTATGT < 41bp 1 0.186565131416864 1 0.397282183170319 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593596 chr19:49593597 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_20458 0 0 6 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593597 49593597 1 + G A COAD 49593598 + 49593578 49593618 41 GCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGTCA GCTGAAACCCGAGAGGAGCACATGGAGAGGAAAGTATGTCA < 41bp 1 0.555740691192923 1 0.360303103923798 experiment 0.888518617614155 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593598 chr19:49593597 nonsynonymous SNV 0.997 4 20 hm5C_associated_SNPs_20459 0 0 6 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr1 28862501 28862501 1 + C T COAD 28862499 + 28862479 28862519 41 TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTC TTGCCATCTCCCATGAGGGCCATGTGTACGGCTTCGGCCTC < 41bp 1 0.317962931963195 1 0.0629045963287354 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862499 chr1:28862501 synonymous SNV . 0 23 hm5C_associated_SNPs_20460 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28862448-28862506
64251 chr1 28862501 28862501 1 + C T COAD 28862519 + 28862499 28862539 41 CACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGG CATGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGG < 41bp 1 0.752009588082072 1 0.922838270664215 experiment 0.495980823835856 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862519 chr1:28862501 synonymous SNV . 0 3 hm5C_associated_SNPs_20461 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28862448-28862506
64251 chr2 101549387 101549387 1 + C T COAD 101549381 + 101549361 101549401 41 CTCTTTTCTAGAAGTCTCAGCGCAAACGGAAATCTGTGACA CTCTTTTCTAGAAGTCTCAGCGCAAATGGAAATCTGTGACA < 41bp 1 0.382223554479768 1 0.706917703151703 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101549381 chr2:101549387 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_20462 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:101549380-101549400
64251 chr5 118484601 118484601 1 + C T COAD 118484585 + 118484565 118484605 41 GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGCCATT GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGTCATT < 41bp 1 0.0320392682427217 1 0.104627311229706 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118484585 chr5:118484601 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_20463 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:118484577-118484606
64251 chr1 161751784 161751784 1 + G A COAD 161751776 + 161751756 161751796 41 GACATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA GACATTTGGGACATCAACAACCAAATCTATACAGGTAATTA < 41bp 1 0.158087398468044 1 0.0671840906143188 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751776 chr1:161751784 nonsynonymous SNV 0.994 0 29 hm5C_associated_SNPs_20464 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:161751765-161751788
64251 chr17 75398196 75398196 1 + C A COAD 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCCCACCACGGAGGGTCCAGACTCCCCTACTCCGAGC < 41bp 1 0.337152002353115 1 0.199288606643677 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398196 synonymous SNV . 0 12 hm5C_associated_SNPs_20465 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:75398170-75398197
64251 chr15 32920978 32920978 1 + T G COAD 32920986 + 32920966 32921006 41 CAGAACACCTTCTATTACACCTCAAGAAGAAAGAATTGGTA CAGAACACCTTCGATTACACCTCAAGAAGAAAGAATTGGTA < 41bp 1 0.467150480685619 1 0.555000782012939 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32920986 chr15:32920978 synonymous SNV . 0 13 hm5C_associated_SNPs_20466 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:32920968-32920991
64251 chr10 95262988 95262988 1 + T C COAD 95262979 + 95262959 95262999 41 GAAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGG GAAGGCCAGATATAGTACTACCACATTGCCTGAACAGCTGG < 41bp 1 0.471506625328439 1 0.115105926990509 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262979 chr10:95262988 nonsynonymous SNV 0.006 3 30 hm5C_associated_SNPs_20470 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262988 95262988 1 + T C COAD 95262980 + 95262960 95263000 41 AAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGA AAGGCCAGATATAGTACTACCACATTGCCTGAACAGCTGGA < 41bp 1 0.383125751079187 1 0.0770024359226227 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262980 chr10:95262988 nonsynonymous SNV 0.006 3 29 hm5C_associated_SNPs_20471 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr10 95262988 95262988 1 + T C COAD 95262982 + 95262962 95263002 41 GGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGAAG GGCCAGATATAGTACTACCACATTGCCTGAACAGCTGGAAG < 41bp 1 0.223996556631733 1 0.140463024377823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262982 chr10:95262988 nonsynonymous SNV 0.006 3 27 hm5C_associated_SNPs_20472 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:95262970-95262991
64251 chr9 100757037 100757037 1 + T G COAD 100757048 + 100757028 100757068 41 TTTCAAATCTCCCCAAGCTGCCTAAATTGAAAAAGGTAAGT TTTCAAATCGCCCCAAGCTGCCTAAATTGAAAAAGGTAAGT < 41bp 1 0.111407542636807 1 0.0994461178779602 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100757048 chr9:100757037 nonsynonymous SNV 0.985 4 10 hm5C_associated_SNPs_20473 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100756971-100757047
64251 chr16 72048541 72048541 1 + G A COAD 72048554 + 72048534 72048574 41 GTCTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGGTA GTCTTCCACCTCCCTGAGGACCAAGCTGTCATTAACAGGTA < 41bp 1 0.212389666184233 1 0.0471792817115784 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHODH ENSG00000102967 CDS Human protein_coding chr16:72048554 chr16:72048541 nonsynonymous SNV 0.971 5 8 hm5C_associated_SNPs_20476 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:72048541-72048571
64251 chr16 72048541 72048541 1 + G A COAD 72048555 + 72048535 72048575 41 TCTTCCGCCTCCCTGAGGACCAAGCTGTCATTAACAGGTAG TCTTCCACCTCCCTGAGGACCAAGCTGTCATTAACAGGTAG < 41bp 1 0.417208767885187 1 0.361894905567169 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHODH ENSG00000102967 CDS Human protein_coding chr16:72048555 chr16:72048541 nonsynonymous SNV 0.971 5 7 hm5C_associated_SNPs_20477 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:72048541-72048571
64251 chr16 72048541 72048541 1 + G A COAD 72048559 + 72048539 72048579 41 CCGCCTCCCTGAGGACCAAGCTGTCATTAACAGGTAGGTGA CCACCTCCCTGAGGACCAAGCTGTCATTAACAGGTAGGTGA < 41bp 1 0.263632984898471 1 0.0613999962806702 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHODH ENSG00000102967 CDS Human protein_coding chr16:72048559 chr16:72048541 nonsynonymous SNV 0.971 5 3 hm5C_associated_SNPs_20478 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:72048541-72048571
64251 chr16 2122324 2122324 1 + C A COAD 2122321 + 2122301 2122341 41 TAAAGTGCTCATCTTTACTTCCCCTTGCAGTGTGGACCAGC TAAAGTGCTCATCTTTACTTCCCATTGCAGTGTGGACCAGC < 41bp 1 0.0791515205844313 1 0.0275648236274719 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2122321 chr16:2122324 nonsynonymous SNV 0.406 4 24 hm5C_associated_SNPs_20479 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2122302-2122340
64251 chr20 37570738 37570738 1 + T C COAD 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCTCAATTTCTGGATATGTGCACGGATCTGAAAGTTCATCC < 41bp 1 0.721225905721582 1 0.11173751950264 experiment 0.557548188556837 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570738 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_20480 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37570719-37570750
64251 chr16 1823715 1823715 1 + A C COAD 1823707 + 1823687 1823727 41 TCCTCTCCCCCGGTCCCAGCCATCCTGGAAGACGCCGGTGC TCCTCTCCCCCGGTCCCAGCCATCCTGGCAGACGCCGGTGC < 41bp 1 0.159227394601065 1 0.271699607372284 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1823707 chr16:1823715 nonsynonymous SNV 0.785 3 29 hm5C_associated_SNPs_20482 0 0 1 PPIG POSTAR2 ENCODE chr16:1823709-1823762
64251 chr2 9528458 9528458 1 + C A COAD 9528446 + 9528426 9528466 41 AGTCCCAACCGGCGGGAAGACCGGCCCATCAGCTTCTACCA AGTCCCAACCGGCGGGAAGACCGGCCCATCAGATTCTACCA < 41bp 1 0.424659679834315 1 0.526585519313812 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASAP2 ENSG00000151693 CDS Human protein_coding chr2:9528446 chr2:9528458 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_20483 0 0 2 GRWD1 POSTAR2 ENCODE chr2:9528422-9528500
64251 chr20 60701443 60701443 1 + G A COAD 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTACGGCCCACTGGCGGCCAGCTCCCTGCTCAGCC < 41bp 1 0.675039488676507 1 0.452198296785355 experiment 0.649921022646985 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701443 synonymous SNV . 0 16 hm5C_associated_SNPs_20484 0 0 2 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr14 20943232 20943232 1 + G A COAD 20943217 + 20943197 20943237 41 GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCC GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCATTTCC < 41bp 1 0.483608872228358 1 0.304251432418823 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 CDS Human protein_coding chr14:20943217 chr14:20943232 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_20485 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20943220-20943260
64251 chr16 23700975 23700975 1 + G A COAD 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACCTCAGCAACGGCAACGTGCAGATCAACTTCTTCCA < 41bp 1 0.233215549075734 1 0.334613859653473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700975 nonsynonymous SNV 0.913 2 20 hm5C_associated_SNPs_20486 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23700913-23700979
64251 chrX 41201825 41201825 1 + G A COAD 41201835 + 41201815 41201855 41 AAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATC AAATTTGAACATGGTGGAAACAGTCGCTGGTGTGACAAATC < 41bp 1 0.251223123826827 1 0.129067212343216 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201835 chrX:41201825 nonsynonymous SNV 0.997 3 11 hm5C_associated_SNPs_20487 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201825 41201825 1 + G A COAD 41201839 + 41201819 41201859 41 TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT TTGAACATGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT < 41bp 1 0.711096708849929 1 0.159530758857727 experiment 0.577806582300142 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201839 chrX:41201825 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_20488 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr15 91424646 91424646 1 + C T COAD 91424655 + 91424635 91424675 41 GCCAGCGTCTGCGCCCCCTGCCACGCCTCATGTGCCACATG GCCAGCGTCTGTGCCCCCTGCCACGCCTCATGTGCCACATG < 41bp 1 0.142236010790884 1 0.208321839570999 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FURIN ENSG00000140564 CDS Human protein_coding chr15:91424655 chr15:91424646 synonymous SNV . 0 12 hm5C_associated_SNPs_20490 0 0 1 SERBP1 POSTAR2 ENCODE chr15:91424603-91424658
64251 chr3 49720279 49720279 1 + C T COAD 49720263 + 49720243 49720283 41 TTCCTGGGGCTGCAACAGCTCGGTGTCTTGCAGGTGCGTGG TTCCTGGGGCTGCAACAGCTCGGTGTCTTGCAGGTGTGTGG < 41bp 1 0.405120365654572 1 0.513238728046417 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49720263 chr3:49720279 synonymous SNV . 0 37 hm5C_associated_SNPs_20491 0 0 1 FMR1 POSTAR2 ENCODE chr3:49720274-49720333
64251 chr17 42225437 42225437 1 + C A COAD 42225441 + 42225421 42225461 41 TCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGG TCCAGCACGCCCAGTGATGACAGCCGTCCATCATGCATAGG < 41bp 1 0.538001137592851 1 0.0553948879241943 experiment 0.923997724814298 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225441 chr17:42225437 nonsynonymous SNV 0.000 2 17 hm5C_associated_SNPs_20492 0 0 2 RBM15 POSTAR2 ENCODE chr17:42225390-42225451
64251 chr17 42225437 42225437 1 + C A COAD 42225444 + 42225424 42225464 41 AGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC AGCACGCCCAGTGATGACAGCCGTCCATCATGCATAGGAGC < 41bp 1 0.0370622392123344 1 0.441643536090851 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225444 chr17:42225437 nonsynonymous SNV 0.000 2 14 hm5C_associated_SNPs_20493 0 0 2 RBM15 POSTAR2 ENCODE chr17:42225390-42225451
64251 chr1 24996685 24996685 1 + C T COAD 24996673 + 24996653 24996693 41 CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGTAGCTAAAA < 41bp 1 0.565716979042106 1 0.104140728712082 experiment 0.868566041915789 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996673 chr1:24996685 nonsynonymous SNV 0.999 1 33 hm5C_associated_SNPs_20494 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CCGATCTGTCTCCGGGTCTCCTGAGCCAGTAGCTAAAAAGC < 41bp 1 0.578346269987622 1 0.543878138065338 experiment 0.843307460024757 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996685 nonsynonymous SNV 0.999 1 30 hm5C_associated_SNPs_20495 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996681 + 24996661 24996701 41 CTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA CTGTCTCCGGGTCTCCTGAGCCAGTAGCTAAAAAGCCCCCA < 41bp 1 0.331943879140862 1 0.38462969660759 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996681 chr1:24996685 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_20496 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996688 + 24996668 24996708 41 CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC CGGGTCTCCTGAGCCAGTAGCTAAAAAGCCCCCAGCACCTC < 41bp 1 0.731472203720931 1 0.477102220058441 experiment 0.537055592558137 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996688 chr1:24996685 nonsynonymous SNV 0.999 1 18 hm5C_associated_SNPs_20497 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996696 + 24996676 24996716 41 CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCC CTGAGCCAGTAGCTAAAAAGCCCCCAGCACCTCCATCCCCC < 41bp 1 0.361679130517757 1 0.0699065327644348 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996696 chr1:24996685 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_20498 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996697 + 24996677 24996717 41 TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG TGAGCCAGTAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG < 41bp 1 0.679942642530642 1 0.110869556665421 experiment 0.640114714938716 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996697 chr1:24996685 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_20499 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996698 + 24996678 24996718 41 GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT GAGCCAGTAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT < 41bp 1 0.241181083056882 1 0.0824381709098816 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996698 chr1:24996685 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_20500 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996703 + 24996683 24996723 41 AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT AGTAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT < 41bp 1 0.284399323054235 1 0.122780114412308 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996703 chr1:24996685 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_20501 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996685 24996685 1 + C T COAD 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT TAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT < 41bp 1 0.0529747263009247 1 0.0174517631530762 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996685 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_20502 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr8 123965567 123965567 1 + C T COAD 123965569 + 123965549 123965589 41 AAGGCCAAGATGTGGGAGCCCCCAATGGTGCTCTGTCTCGA AAGGCCAAGATGTGGGAGTCCCCAATGGTGCTCTGTCTCGA < 41bp 1 0.5157981241249 1 0.671586513519287 experiment 0.9684037517502 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965569 chr8:123965567 nonsynonymous SNV 0.553 0 19 hm5C_associated_SNPs_20503 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:123965566-123965587
64251 chr19 1037863 1037863 1 + A C COAD 1037845 + 1037825 1037865 41 GGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATA GGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGACTA < 41bp 1 0.719041427670895 1 0.914966344833374 experiment 0.56191714465821 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037845 chr19:1037863 nonsynonymous SNV 0.014 0 39 hm5C_associated_SNPs_20504 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1037861-1037897
64251 chr19 1037863 1037863 1 + A C COAD 1037846 + 1037826 1037866 41 GCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATAT GCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGACTAT < 41bp 1 0.683986245834702 1 0.847713947296143 experiment 0.632027508330596 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037846 chr19:1037863 nonsynonymous SNV 0.014 0 38 hm5C_associated_SNPs_20505 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1037861-1037897
64251 chr19 1037863 1037863 1 + A C COAD 1037857 + 1037837 1037877 41 TGCCCGGACCCGGGGGAGGTCCCTGAATATCCCCCTTACTA TGCCCGGACCCGGGGGAGGTCCCTGACTATCCCCCTTACTA < 41bp 1 0.249092753339007 1 0.154125034809113 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037857 chr19:1037863 nonsynonymous SNV 0.014 0 27 hm5C_associated_SNPs_20506 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1037861-1037897
64251 chr12 121858086 121858086 1 + T C COAD 121858092 + 121858072 121858112 41 ACAGAAGATGATGATGACGACGATGATGAGGATGATGATGA ACAGAAGATGATGACGACGACGATGATGAGGATGATGATGA < 41bp 1 0.363145974774843 1 0.290982663631439 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNF34 ENSG00000170633 CDS Human protein_coding chr12:121858092 chr12:121858086 synonymous SNV . 0 15 hm5C_associated_SNPs_20510 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121858069-121858114
64251 chr21 38853079 38853079 1 + T C COAD 38853089 + 38853069 38853109 41 GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGG GAAAAGTGGACGGATCGTTACGAAATTGACTCCTTGATAGG < 41bp 1 0.630850823396587 1 0.766120195388794 experiment 0.738298353206825 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853089 chr21:38853079 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_20511 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:38852989-38853112
64251 chr15 22945047 22945047 1 + C T COAD 22945057 + 22945037 22945077 41 CAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC CAGGTGGTCATGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC < 41bp 1 0.167372198284732 1 0.162616163492203 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22945057 chr15:22945047 nonsynonymous SNV . 0 11 hm5C_associated_SNPs_20513 0 0 5 BUD13 POSTAR2 ENCODE chr15:22944994-22945076
64251 chr6 160477541 160477541 1 + C T COAD 160477524 + 160477504 160477544 41 CTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAACGAC CTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAATGAC < 41bp 1 0.032220178181498 1 0.0757785737514496 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160477524 chr6:160477541 nonsynonymous SNV 0.074 0 38 hm5C_associated_SNPs_20524 0 0 3 DDX24 POSTAR2 ENCODE chr6:160477512-160477547
64251 chr11 61916012 61916012 1 + G A COAD 61915994 + 61915974 61916014 41 TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGAAG < 41bp 1 0.589645229074367 1 0.704985618591309 experiment 0.820709541851266 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915994 chr11:61916012 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_20525 0 0 2 UCHL5 POSTAR2 ENCODE chr11:61916005-61916025
64251 chr11 61916012 61916012 1 + G A COAD 61915997 + 61915977 61916017 41 GGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAGAAG GGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGAAGAAG < 41bp 1 0.349949657853287 1 0.569162607192993 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61915997 chr11:61916012 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_20526 0 0 2 UCHL5 POSTAR2 ENCODE chr11:61916005-61916025
64251 chr17 12028670 12028670 1 + G T COAD 12028682 + 12028662 12028702 41 GATGTCTGGAGTTTGGGGATCACATTGGTATGTTTATGCTG GATGTCTGTAGTTTGGGGATCACATTGGTATGTTTATGCTG < 41bp 1 0.383231020534006 1 0.169388860464096 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12028682 chr17:12028670 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_20527 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:12028650-12028672
64251 chr19 17273174 17273174 1 + C T COAD 17273167 + 17273147 17273187 41 TCTGTGTCCACAGGCCATCACTGCCCGCGACTCCATGGCCA TCTGTGTCCACAGGCCATCACTGCCCGTGACTCCATGGCCA < 41bp 1 0.240516863465168 1 0.13729602098465 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17273167 chr19:17273174 synonymous SNV . 0 28 hm5C_associated_SNPs_20528 0 0 2 FMR1 POSTAR2 ENCODE chr19:17273159-17273193
64251 chr3 42264530 42264530 1 + T G COAD 42264511 + 42264491 42264531 41 GGTGGCCACACCATGCACTCCACGGAGACTGAGCCTGGCTG GGTGGCCACACCATGCACTCCACGGAGACTGAGCCTGGCGG < 41bp 1 0.526571258991064 1 0.387465059757233 experiment 0.946857482017872 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42264511 chr3:42264530 synonymous SNV . 0 40 hm5C_associated_SNPs_20529 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:42264503-42264538
64251 chr1 16255143 16255143 1 + A G COAD 16255130 + 16255110 16255150 41 ATAAAGAACGAACTTTTGATCCGGAGAGAGTGGAGAGAGAG ATAAAGAACGAACTTTTGATCCGGAGAGAGTGGGGAGAGAG < 41bp 1 0.490844225742424 1 0.375595092773438 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255130 chr1:16255143 nonsynonymous SNV 0.809 2 34 hm5C_associated_SNPs_20530 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr9 116269709 116269709 1 + T C COAD 116269708 + 116269688 116269728 41 CCCAACAAACGGGAGAAGAACTGCACCCATGGGGTCCAGGC CCCAACAAACGGGAGAAGAACCGCACCCATGGGGTCCAGGC < 41bp 1 0.542248498296698 1 0.18936225771904 experiment 0.915503003406604 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RGS3 ENSG00000138835 CDS Human protein_coding chr9:116269708 chr9:116269709 nonsynonymous SNV 0.955 2 22 hm5C_associated_SNPs_20531 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:116269693-116269718
64251 chr5 139866560 139866560 1 + G A COAD 139866547 + 139866527 139866567 41 TGAGTTGACTTTTTAGGTGCCACGTGTGCCAACGCATACAC TGAGTTGACTTTTTAGGTGCCACGTGTGCCAACACATACAC < 41bp 1 0.449823249284672 1 0.186759859323502 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139866547 chr5:139866560 synonymous SNV . 0 34 hm5C_associated_SNPs_20533 0 0 16 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:139866539-139866560
64251 chr19 41111425 41111425 1 + C G COAD 41111411 + 41111391 41111431 41 GGCCCTTGGGAGGAGGCGGACGCTGAGGCGGTGGCGCGGGC GGCCCTTGGGAGGAGGCGGACGCTGAGGCGGTGGGGCGGGC < 41bp 1 0.587487782863616 1 0.50154834985733 experiment 0.825024434272768 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41111411 chr19:41111425 nonsynonymous SNV 0.380 0 35 hm5C_associated_SNPs_20534 0 0 7 DDX24 POSTAR2 ENCODE chr19:41111421-41111452
64251 chr9 91083305 91083305 1 + A G COAD 91083287 + 91083267 91083307 41 TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGATG TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGGTG < 41bp 1 0.365403521278532 1 0.641505897045135 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083287 chr9:91083305 nonsynonymous SNV 0.987 1 39 hm5C_associated_SNPs_20535 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:91083285-91083306
64251 chr2 238976790 238976790 1 + C T COAD 238976802 + 238976782 238976822 41 AATCTTCACTTCCGGGGGCACTGAGGTAAAGCTTCTGAACA AATCTTCATTTCCGGGGGCACTGAGGTAAAGCTTCTGAACA < 41bp 1 0.396815331803532 1 0.17165008187294 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCLY ENSG00000132330 CDS Human protein_coding chr2:238976802 chr2:238976790 nonsynonymous SNV 0.650 5 9 hm5C_associated_SNPs_20536 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238976777-238976804
64251 chr10 75551702 75551702 1 + G T COAD 75551705 + 75551685 75551725 41 AACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGCTTCCGG AACACAAGAAGACGCTGTAGCGGCTCTTCCCCGGCTTCCGG < 41bp 1 0.523324726460681 1 0.491052836179733 experiment 0.953350547078638 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551705 chr10:75551702 stopgain 0.993 0 18 hm5C_associated_SNPs_20537 0 0 6 GRWD1 POSTAR2 ENCODE chr10:75551658-75551711
64251 chr13 26956983 26956983 1 + T C COAD 26956984 + 26956964 26957004 41 TTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA TTTTAGTTATGGGTGAAGGCCCTGAGCGAGGAAGAGTAAAA < 41bp 1 0.181524382894622 1 0.105451673269272 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26956984 chr13:26956983 synonymous SNV . 0 20 hm5C_associated_SNPs_20538 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr13:26956960-26956994
64251 chr19 33167268 33167268 1 + G A COAD 33167256 + 33167236 33167276 41 CTGGTGCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCT CTGGTGCTGACCGTCGGTGGCTCGGCGGACTCACAGAACCT < 41bp 1 0.683220524175395 1 0.540461897850037 experiment 0.63355895164921 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167256 chr19:33167268 synonymous SNV . 0 33 hm5C_associated_SNPs_20539 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr19 33167268 33167268 1 + G A COAD 33167261 + 33167241 33167281 41 GCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCTGCGGC GCTGACCGTCGGTGGCTCGGCGGACTCACAGAACCTGCGGC < 41bp 1 0.566730479202649 1 0.4817214012146 experiment 0.866539041594703 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167261 chr19:33167268 synonymous SNV . 0 28 hm5C_associated_SNPs_20540 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr20 30822387 30822387 1 + C T COAD 30822376 + 30822356 30822396 41 CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCGGGAGCGGG CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGTGGGAGCGGG < 41bp 1 0.0558320924627369 1 0.0359227955341339 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822376 chr20:30822387 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_20541 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:30822348-30822390
64251 chr2 32673990 32673990 1 + C A COAD 32673982 + 32673962 32674002 41 GTCAGATGAAATTGATTTATCAGATGTCCTTTCAGGTAGTG GTCAGATGAAATTGATTTATCAGATGTCATTTCAGGTAGTG < 41bp 1 0.144969131090884 1 0.414455533027649 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673982 chr2:32673990 nonsynonymous SNV 0.999 1 29 hm5C_associated_SNPs_20542 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673990 32673990 1 + C A COAD 32673989 + 32673969 32674009 41 GAAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTT GAAATTGATTTATCAGATGTCATTTCAGGTAGTGATTTCTT < 41bp 1 0.0131628747405202 1 0.0210238099098206 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673989 chr2:32673990 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_20543 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673990 32673990 1 + C A COAD 32673994 + 32673974 32674014 41 TGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTTTATT TGATTTATCAGATGTCATTTCAGGTAGTGATTTCTTTTATT < 41bp 1 0.189517249950655 1 0.258821070194244 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673994 chr2:32673990 nonsynonymous SNV 0.999 1 17 hm5C_associated_SNPs_20544 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr19 33202820 33202820 1 + A G COAD 33202807 + 33202787 33202827 41 ATATCCACGTGACTGTTCAGCCAAAGTATAAACACGTTTAT ATATCCACGTGACTGTTCAGCCAAAGTATAAACGCGTTTAT < 41bp 1 0.341678135412362 1 0.166741818189621 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202807 chr19:33202820 nonsynonymous SNV 0.027 3 34 hm5C_associated_SNPs_20545 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33202688-33202963
64251 chr8 144732962 144732962 1 + T G COAD 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCATCGCTCAGACCTTAGTGAACACCA < 41bp 1 0.541286399665399 1 0.21034175157547 experiment 0.917427200669202 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732962 nonsynonymous SNV 0.001 0 32 hm5C_associated_SNPs_20547 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:144732936-144732963
64251 chr21 38865413 38865413 1 + G A COAD 38865404 + 38865384 38865424 41 CCTTGCCATTGATATGTGGTCCCTCGGGTGTATTTTGGTTG CCTTGCCATTGATATGTGGTCCCTCGGGTATATTTTGGTTG < 41bp 1 0.123494660122221 1 0.0566667914390564 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38865404 chr21:38865413 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_20549 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:38865394-38865424
64251 chr3 58092574 58092574 1 + G A COAD 58092593 + 58092573 58092613 41 AGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC AACCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC < 41bp 1 0.356152102931296 1 0.220216125249863 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092593 chr3:58092574 nonsynonymous SNV 0.488 2 2 hm5C_associated_SNPs_20550 0 0 4 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr11 6629279 6629279 1 + C T COAD 6629293 + 6629273 6629313 41 AAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC AAGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC < 41bp 1 0.24775960783338 1 0.392025291919708 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629293 chr11:6629279 synonymous SNV . 0 7 hm5C_associated_SNPs_20552 0 0 1 FXR2 POSTAR2 ENCODE chr11:6629275-6629371
64251 chr11 6629279 6629279 1 + C T COAD 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGATGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG < 41bp 1 0.212075107100917 1 0.0995577573776245 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629279 synonymous SNV . 0 6 hm5C_associated_SNPs_20553 0 0 1 FXR2 POSTAR2 ENCODE chr11:6629275-6629371
64251 chr20 2844843 2844843 1 + C T COAD 2844855 + 2844835 2844875 41 ATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAG ATGAGCCATGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAG < 41bp 1 0.500159242630505 1 0.436193019151688 experiment 0.99968151473899 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2844855 chr20:2844843 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_20556 0 0 3 BUD13 POSTAR2 ENCODE chr20:2844810-2844851
64251 chr9 71842728 71842728 1 + C T COAD 71842734 + 71842714 71842754 41 CTCCAGAGGAGAGACGTCATCAGTATTCTGATTATGATTAT CTCCAGAGGAGAGATGTCATCAGTATTCTGATTATGATTAT < 41bp 1 0.608040590058577 1 0.534609854221344 experiment 0.783918819882845 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71842734 chr9:71842728 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_20557 1 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:71842707-71842730
64251 chr13 115037794 115037794 1 + T G COAD 115037793 + 115037773 115037813 41 AGACTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCA AGACTGCAGAAGAAACGGGGCGTACGCCATTGGAAACCTCA < 41bp 1 0.0964199675698408 1 0.0802081227302551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC16 ENSG00000130177 CDS Human protein_coding chr13:115037793 chr13:115037794 nonsynonymous SNV 0.228 1 22 hm5C_associated_SNPs_20558 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:115037780-115037800
64251 chr1 26885393 26885393 1 + C T COAD 26885380 + 26885360 26885400 41 GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC GCCACCGGCCTGATGGAAGACGACGGCAAGCCTTGTGCCCC < 41bp 1 0.750981832271709 1 0.704191088676453 experiment 0.498036335456582 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885380 chr1:26885393 nonsynonymous SNV 0.736 0 34 hm5C_associated_SNPs_20559 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr5 71492182 71492182 1 + C T COAD 71492181 + 71492161 71492201 41 GGCCAGTGGGGATGACCGAGCCGAAGAAGACATGGATGAGG GGCCAGTGGGGATGACCGAGCTGAAGAAGACATGGATGAGG < 41bp 1 0.709568838669967 1 0.555284142494202 experiment 0.580862322660066 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492181 chr5:71492182 synonymous SNV . 0 22 hm5C_associated_SNPs_20560 0 0 22 FMR1 POSTAR2 GSE39682,GSM977616 chr5:71492146-71492183
64251 chr6 42975948 42975948 1 + C T COAD 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTATGAGACGGAGCATCACAACGGGATTGCTGAG < 41bp 1 0.295615273540018 1 0.0487948358058929 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975948 synonymous SNV . 0 11 hm5C_associated_SNPs_20562 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:42975932-42975953
64251 chr16 77233391 77233391 1 + G T COAD 77233404 + 77233384 77233424 41 GCCAGAAGCTACTGAGGAGGCTGAAGGTAGTGAGGGCAAGT GCCAGAATCTACTGAGGAGGCTGAAGGTAGTGAGGGCAAGT < 41bp 1 0.780947284761593 1 0.370511651039124 experiment 0.438105430476813 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYCE1L ENSG00000205078 CDS Human protein_coding chr16:77233404 chr16:77233391 nonsynonymous SNV 0.001 0 8 hm5C_associated_SNPs_20565 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:77233383-77233404
64251 chr21 30714989 30714989 1 + C A COAD 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CTGACCGGCCTCCAGCAGTGCTGCCTCCATGTGCCAGAGGA < 41bp 1 0.290436415474615 1 0.0638453662395477 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714989 synonymous SNV . 0 29 hm5C_associated_SNPs_20566 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30714958-30714992
64251 chr21 35169850 35169850 1 + G A COAD 35169864 + 35169844 35169884 41 TGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA TGGGTCAGCTTTTCCATCAACACCAAGAACCAGCTAAGCCA < 41bp 1 0.798622202455603 1 0.266461670398712 experiment 0.402755595088794 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35169864 chr21:35169850 nonsynonymous SNV 0.997 1 7 hm5C_associated_SNPs_20568 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:35169840-35169853
64251 chr8 9413799 9413799 1 + C A COAD 9413797 + 9413777 9413817 41 ACTTCATCTGCCGCTGGGGTCGCTCCCAACCCAGCCGGCAG ACTTCATCTGCCGCTGGGGTCGATCCCAACCCAGCCGGCAG < 41bp 1 0.163483478867141 1 0.400347083806992 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9413797 chr8:9413799 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_20569 0 0 2 YBX3 POSTAR2 ENCODE chr8:9413785-9413822
64251 chr19 2341133 2341133 1 + C T COAD 2341147 + 2341127 2341167 41 CAGCACCGCGTGATGAAGAGCCCTGGCCCCGGGCTGCTCTG CAGCACTGCGTGATGAAGAGCCCTGGCCCCGGGCTGCTCTG < 41bp 1 0.118861590771455 1 0.22504860162735 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPPL2B ENSG00000005206 ncRNA_exonic Human protein_coding chr19:2341147 chr19:2341133 . . 0 7 hm5C_associated_SNPs_20570 0 0 7 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:2341120-2341140
64251 chr10 3176689 3176689 1 + T C COAD 3176685 + 3176665 3176705 41 CCACCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACT CCACCAACAGGGTGGGGCACCCTCCCCATTTGATAGAAACT < 41bp 1 0.00675278564875763 1 0.11449933052063 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176685 chr10:3176689 synonymous SNV . 0 25 hm5C_associated_SNPs_20571 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr10 3176689 3176689 1 + T C COAD 3176688 + 3176668 3176708 41 CCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG CCAACAGGGTGGGGCACCCTCCCCATTTGATAGAAACTTTG < 41bp 1 0.462380599013996 1 0.737730860710144 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176688 chr10:3176689 synonymous SNV . 0 22 hm5C_associated_SNPs_20572 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr22 32889242 32889242 1 + G A COAD 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAAGTTTTTATATCTGCGTGATTTTCGAGGTGAT < 41bp 1 0.530411392636174 1 0.248434334993362 experiment 0.939177214727651 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889242 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_20574 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32889222-32889255
64251 chr10 91465094 91465094 1 + T G COAD 91465083 + 91465063 91465103 41 TTTTAATCAAGAGGGAGTACCTCGACCATCTTATGTTTTTA TTTTAATCAAGAGGGAGTACCTCGACCATCTGATGTTTTTA < 41bp 1 0.744718975266933 1 0.77349990606308 experiment 0.510562049466135 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91465083 chr10:91465094 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_20576 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:91465078-91465098
64251 chrX 100880684 100880684 1 + C T COAD 100880681 + 100880661 100880701 41 TGACTGTTACTAATGAGTATCAGCACATGCTTGCTAATTCC TGACTGTTACTAATGAGTATCAGTACATGCTTGCTAATTCC < 41bp 1 0.435522935438775 1 0.747013449668884 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880681 chrX:100880684 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_20578 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:100880670-100880694
64251 chrX 100880684 100880684 1 + C T COAD 100880686 + 100880666 100880706 41 GTTACTAATGAGTATCAGCACATGCTTGCTAATTCCATTTC GTTACTAATGAGTATCAGTACATGCTTGCTAATTCCATTTC < 41bp 1 0.33153676052068 1 0.0189753472805023 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880686 chrX:100880684 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_20579 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:100880670-100880694
64251 chr7 4002355 4002355 1 + G A COAD 4002345 + 4002325 4002365 41 CCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG CCATCTCCATCAGCAGGCTCCAGAATCCTCAATACAAAGTG < 41bp 1 0.220829466704185 1 0.420408248901367 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SDK1 ENSG00000146555 CDS Human protein_coding chr7:4002345 chr7:4002355 nonsynonymous SNV 0.582 4 31 hm5C_associated_SNPs_20586 0 0 1 GRWD1 POSTAR2 ENCODE chr7:4002303-4002476
64251 chr7 30961752 30961752 1 + C T COAD 30961771 + 30961751 30961791 41 GCGTGCTGGCTACTACCGACCGGAGGCGCCGTGACCTTGGT GTGTGCTGGCTACTACCGACCGGAGGCGCCGTGACCTTGGT < 41bp 1 0.760097934641283 1 0.900869011878967 experiment 0.479804130717435 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP1 ENSG00000240583;ENSG00000250424 CDS Human other chr7:30961771 chr7:30961752 synonymous SNV . 0 2 hm5C_associated_SNPs_20587 0 0 1 SND1 POSTAR2 ENCODE chr7:30961742-30961831
64251 chr12 46215250 46215250 1 + A T COAD 46215264 + 46215244 46215284 41 GAGAAGACTGATAGAGACTTCGTTAAGGTAAATCATTTTAA GAGAAGTCTGATAGAGACTTCGTTAAGGTAAATCATTTTAA < 41bp 1 0.0750800339388374 1 0.155941158533096 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID2 ENSG00000189079 CDS Human protein_coding chr12:46215264 chr12:46215250 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_20589 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:46215224-46215260
64251 chr5 36985803 36985803 1 + C T COAD 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCGACATCGAGGGGATCAGTCTAGGGTTTGAAGACCA < 41bp 1 0.141468890525943 1 0.0896184742450714 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985803 stopgain 1.000 0 33 hm5C_associated_SNPs_20590 1 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:36985753-36985813
64251 chr11 65403915 65403915 1 + C A COAD 65403903 + 65403883 65403923 41 CACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGC CACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCATGAGTGGC < 41bp 1 0.160017210843158 1 0.355351865291595 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403903 chr11:65403915 nonsynonymous SNV 0.918 0 33 hm5C_associated_SNPs_20591 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:65403780-65403916
64251 chr11 65403915 65403915 1 + C A COAD 65403904 + 65403884 65403924 41 ACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGCT ACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCATGAGTGGCT < 41bp 1 0.423165680264005 1 0.546309292316437 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403904 chr11:65403915 nonsynonymous SNV 0.918 0 32 hm5C_associated_SNPs_20592 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:65403780-65403916
64251 chr15 73996759 73996759 1 + C T COAD 73996758 + 73996738 73996778 41 GCGAATGGCACCTACAGCTGCCTGGTGCGCAACCCCGTGCT GCGAATGGCACCTACAGCTGCTTGGTGCGCAACCCCGTGCT < 41bp 1 0.461191929005095 1 0.219303488731384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD276 ENSG00000103855 CDS Human protein_coding chr15:73996758 chr15:73996759 synonymous SNV . 0 22 hm5C_associated_SNPs_20593 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr15:73996715-73996764
64251 chr19 48248839 48248839 1 + T G COAD 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGGTG < 41bp 1 0.739695310645453 1 0.46774098277092 experiment 0.520609378709094 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248839 nonsynonymous SNV 0.000 0 39 hm5C_associated_SNPs_20594 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chrX 153628249 153628249 1 + T C COAD 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAC < 41bp 1 0.387440225909348 1 0.0593574047088623 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628249 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_20597 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr5 179263603 179263603 1 + C T COAD 179263583 + 179263563 179263603 41 CCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGC CCAGTATTCAAAGCATCCCCCGCCGTTGTGACCACTTTTGT < 41bp 1 0.407560308526649 1 0.339669167995453 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179263583 chr5:179263603 synonymous SNV . 0 41 hm5C_associated_SNPs_20598 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:179263570-179263603
64251 chr16 712760 712760 1 + C T COAD 712768 + 712748 712788 41 GGACATGGGCGTCGTGGGCACCACGGCGGGCACGCTGTGGT GGACATGGGCGTTGTGGGCACCACGGCGGGCACGCTGTGGT < 41bp 1 0.211178232945622 1 0.383971214294434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:712768 chr16:712760 synonymous SNV . 0 13 hm5C_associated_SNPs_20599 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:712736-712766
64251 chr7 94917903 94917903 1 + A G COAD 94917917 + 94917897 94917937 41 CCGTTCAGGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA CCGTTCGGGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA < 41bp 1 0.559156134698586 1 0.150697857141495 experiment 0.881687730602829 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917917 chr7:94917903 nonsynonymous SNV 0.130 0 7 hm5C_associated_SNPs_20600 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr7 819716 819716 1 + A G COAD 819711 + 819691 819731 41 TCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT TCCTACTATCAGAGCAGTGTCCAGTGCCTGTACCGAGAGTT < 41bp 1 0.193226215698245 1 0.247268527746201 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819711 chr7:819716 nonsynonymous SNV 0.359 1 26 hm5C_associated_SNPs_20601 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:819697-819722
64251 chr16 66998553 66998553 1 + T C COAD 66998564 + 66998544 66998584 41 GCAGGGCTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT GCAGGGCTGCTCCACAGAGCCATCACACAGAGTGGGGTCAT < 41bp 1 0.449470602114277 1 0.268282532691956 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66998564 chr16:66998553 nonsynonymous SNV 0.848 3 10 hm5C_associated_SNPs_20602 0 0 1 PPIG POSTAR2 ENCODE chr16:66998524-66998563
64251 chr2 74328807 74328807 1 + C T COAD 74328796 + 74328776 74328816 41 GCGGTGAAGGAGGAGAAGGGCGGTGGTGGTGCGGAGGAGGA GCGGTGAAGGAGGAGAAGGGCGGTGGTGGTGTGGAGGAGGA < 41bp 1 0.531627717911882 1 0.41674929857254 experiment 0.936744564176237 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328796 chr2:74328807 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_20603 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:74328790-74328812
64251 chr12 94563012 94563012 1 + C A COAD 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTTTATGGCACAGTGGTAAT < 41bp 1 0.0543131290638909 1 0.0652722418308258 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563012 synonymous SNV . 0 33 hm5C_associated_SNPs_20604 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr13 114175031 114175031 1 + C T COAD 114175039 + 114175019 114175059 41 CATACAGGCGGGCGCCAGTGCATCTTCTAGGTAAACGCTTT CATACAGGCGGGTGCCAGTGCATCTTCTAGGTAAACGCTTT < 41bp 1 0.211856118400238 1 0.260081648826599 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114175039 chr13:114175031 synonymous SNV . 0 13 hm5C_associated_SNPs_20606 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr13:114175026-114175048
64251 chr12 95897881 95897881 1 + C T COAD 95897862 + 95897842 95897882 41 GTGCTGGAATTGATGTTCGTCTGTGTGATGTTGGTGAGGCC GTGCTGGAATTGATGTTCGTCTGTGTGATGTTGGTGAGGTC < 41bp 1 0.465782554050298 1 0.52300900220871 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95897862 chr12:95897881 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_20608 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:95897840-95897892
64251 chr12 95897881 95897881 1 + C T COAD 95897882 + 95897862 95897902 41 CTGTGTGATGTTGGTGAGGCCATCCAAGAAGTTATGGAGTC CTGTGTGATGTTGGTGAGGTCATCCAAGAAGTTATGGAGTC < 41bp 1 0.258528124967239 1 0.154890418052673 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95897882 chr12:95897881 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_20609 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:95897840-95897892
64251 chr1 40704987 40704987 1 + A T COAD 40704975 + 40704955 40704995 41 AATAAGTTTTAAAACCAGAGCTGAGGCCCTCCATATGTGTG AATAAGTTTTAAAACCAGAGCTGAGGCCCTCCTTATGTGTG < 41bp 1 0.320215684008317 1 0.283372193574905 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RLF ENSG00000117000 CDS Human protein_coding chr1:40704975 chr1:40704987 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_20610 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:40704987-40704988
64251 chr1 63282307 63282307 1 + A T COAD 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CGGGATGTACAATAGAGGATCACGTAATTGCAGGTAATGTA < 41bp 1 0.489382418131068 1 0.151971101760864 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282307 synonymous SNV . 0 35 hm5C_associated_SNPs_20611 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr10 102684006 102684006 1 + C T COAD 102684010 + 102683990 102684030 41 ATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGAC ATTCTGGCAATTCTGGTCACCATTCTACCAGGAATAGTGAC < 41bp 1 0.0390477919423828 1 0.151959955692291 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684010 chr10:102684006 synonymous SNV . 0 17 hm5C_associated_SNPs_20612 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:102684000-102684020
64251 chr17 17041254 17041254 1 + G A COAD 17041237 + 17041217 17041257 41 CTGTCTCTTCCAGAGGAGAGCGCCATGAGTAGCGACCGCAT CTGTCTCTTCCAGAGGAGAGCGCCATGAGTAGCGACCACAT < 41bp 1 0.533823962729351 1 0.696266770362854 experiment 0.932352074541299 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17041237 chr17:17041254 nonsynonymous SNV 0.901 1 38 hm5C_associated_SNPs_20615 0 0 10 BUD13 POSTAR2 ENCODE chr17:17041229-17041321
64251 chr20 30381750 30381750 1 + C A COAD 30381751 + 30381731 30381771 41 AAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGAG AAGAACTGTGGAAATATGCACTTTCTCGTTTGATTCTCGAG < 41bp 1 0.0306226452726664 1 0.0496317446231842 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381751 chr20:30381750 nonsynonymous SNV 0.878 3 20 hm5C_associated_SNPs_20616 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:30381710-30381755
64251 chr4 123260555 123260555 1 + G A COAD 123260543 + 123260523 123260563 41 GAGTGGAACAAAGACTTCTGCTAGCAAAACTGGAATACCAG GAGTGGAACAAAGACTTCTGCTAGCAAAACTGAAATACCAG < 41bp 1 0.115952347600657 1 0.410685420036316 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123260543 chr4:123260555 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_20617 0 0 2 DDX24 POSTAR2 ENCODE chr4:123260487-123260555
64251 chr12 121858089 121858089 1 + C T COAD 121858092 + 121858072 121858112 41 ACAGAAGATGATGATGACGACGATGATGAGGATGATGATGA ACAGAAGATGATGATGATGACGATGATGAGGATGATGATGA < 41bp 1 0.452975450740462 1 0.224586695432663 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNF34 ENSG00000170633 CDS Human protein_coding chr12:121858092 chr12:121858089 synonymous SNV . 0 18 hm5C_associated_SNPs_20620 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121858069-121858114
64251 chr19 45495560 45495560 1 + G A COAD 45495555 + 45495535 45495575 41 AAGTCTGTGGCCCACCTTCCCTGGCGCATGCTCACCTACAA AAGTCTGTGGCCCACCTTCCCTGGCACATGCTCACCTACAA < 41bp 1 0.691360883169444 1 0.629426419734955 experiment 0.617278233661112 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45495555 chr19:45495560 nonsynonymous SNV 0.991 4 26 hm5C_associated_SNPs_20621 0 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:45495499-45495563
64251 chr16 722987 722987 1 + C T COAD 723004 + 722984 723024 41 GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT GCCTGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT < 41bp 1 0.732266521089317 1 0.304885864257812 experiment 0.535466957821366 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723004 chr16:722987 synonymous SNV . 0 4 hm5C_associated_SNPs_20622 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:722972-723010
64251 chr19 47423193 47423193 1 + G T COAD 47423199 + 47423179 47423219 41 ACGAGGCCCACTTAGAGAAGCTGAGGAACGAAAGGAAAAGA ACGAGGCCCACTTATAGAAGCTGAGGAACGAAAGGAAAAGA < 41bp 1 0.329726425599287 1 0.337332457304001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423199 chr19:47423193 stopgain 1.000 1 15 hm5C_associated_SNPs_20623 0 0 1 EIF3H POSTAR2 ENCODE chr19:47423153-47423202
64251 chr19 47423193 47423193 1 + G T COAD 47423207 + 47423187 47423227 41 CACTTAGAGAAGCTGAGGAACGAAAGGAAAAGAGTTGAGAT CACTTATAGAAGCTGAGGAACGAAAGGAAAAGAGTTGAGAT < 41bp 1 0.50063489640472 1 0.436169803142548 experiment 0.998730207190559 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423207 chr19:47423193 stopgain 1.000 1 7 hm5C_associated_SNPs_20624 0 0 1 EIF3H POSTAR2 ENCODE chr19:47423153-47423202
64251 chr19 42848895 42848895 1 + G A COAD 42848907 + 42848887 42848927 41 TTCGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT TTCGTCACATCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT < 41bp 1 0.247186438634617 1 0.118346184492111 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848907 chr19:42848895 synonymous SNV . 0 9 hm5C_associated_SNPs_20626 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42848867-42848905
64251 chr20 37161487 37161487 1 + C G COAD 37161476 + 37161456 37161496 41 GACTCCCGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAG GACTCCCGATAGTGAGAGACCTGCTCAAGCTGTCTTAAGAG < 41bp 1 0.305805371648698 1 0.539831936359406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37161476 chr20:37161487 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_20627 0 0 1 PRPF8 POSTAR2 ENCODE chr20:37161471-37161543
64251 chr8 98699740 98699740 1 + G C COAD 98699751 + 98699731 98699771 41 GGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCAT GGTTCATTGCATTCAACTATCCCTGGGATAGAAAATACCAT < 41bp 1 0.209494057161512 1 0.0763855576515198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98699751 chr8:98699740 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_20628 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr8:98699710-98699748
64251 chr11 68204451 68204451 1 + C T COAD 68204450 + 68204430 68204470 41 CCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTG CCCCGACTGTATCGACGGCTCTGACGAGCTCATGTGTGGTG < 41bp 1 0.308921000958796 1 0.122800171375275 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204450 chr11:68204451 synonymous SNV . 0 22 hm5C_associated_SNPs_20629 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr5 137680836 137680836 1 + G T COAD 137680843 + 137680823 137680863 41 GCAGTGGTGGAGGGGGTGGGCCGCAGGTGCCTCACCAGAGC GCAGTGGTGGAGGTGGTGGGCCGCAGGTGCCTCACCAGAGC < 41bp 1 0.773038432481719 1 0.485997408628464 experiment 0.453923135036562 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680843 chr5:137680836 synonymous SNV . 0 14 hm5C_associated_SNPs_20630 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137680826-137680845
64251 chr5 137680836 137680836 1 + G T COAD 137680844 + 137680824 137680864 41 CAGTGGTGGAGGGGGTGGGCCGCAGGTGCCTCACCAGAGCC CAGTGGTGGAGGTGGTGGGCCGCAGGTGCCTCACCAGAGCC < 41bp 1 0.66174272009628 1 0.514776706695557 experiment 0.67651455980744 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680844 chr5:137680836 synonymous SNV . 0 13 hm5C_associated_SNPs_20631 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137680826-137680845
64251 chr20 3802796 3802796 1 + G T COAD 3802800 + 3802780 3802820 41 CTCATTCACACCTTGAGGGCCCCGAATACTGAGGACACGGG CTCATTCACACCTTGATGGCCCCGAATACTGAGGACACGGG < 41bp 1 0.472182722324264 1 0.0345503091812134 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3802800 chr20:3802796 nonsynonymous SNV 0.637 1 17 hm5C_associated_SNPs_20632 0 0 1 GRWD1 POSTAR2 ENCODE chr20:3802789-3802933
64251 chr9 131247124 131247124 1 + G A COAD 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCAAGGAG < 41bp 1 0.414530617949719 1 0.458017706871033 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247124 nonsynonymous SNV 0.953 4 36 hm5C_associated_SNPs_20633 0 0 7 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr16 12450129 12450129 1 + G A COAD 12450135 + 12450115 12450155 41 GCTCATCGATCTCCGGGGACCGGTGAGTGTTTCCCCAACCC GCTCATCGATCTCCAGGGACCGGTGAGTGTTTCCCCAACCC < 41bp 1 0.378749185193781 1 0.469673842191696 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX29 ENSG00000048471 CDS Human protein_coding chr16:12450135 chr16:12450129 nonsynonymous SNV 0.870 2 15 hm5C_associated_SNPs_20634 0 0 1 ZNF622 POSTAR2 ENCODE chr16:12450090-12450144
64251 chr6 52269005 52269005 1 + G A COAD 52269024 + 52269004 52269044 41 TGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG TACCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG < 41bp 1 0.286196333740398 1 0.626247584819794 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52269024 chr6:52269005 nonsynonymous SNV 0.098 0 2 hm5C_associated_SNPs_20635 0 0 3 SND1 POSTAR2 ENCODE chr6:52268976-52269045
64251 chr11 4091345 4091345 1 + C A COAD 4091338 + 4091318 4091358 41 GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCCAAGGA GGCTGCTGGTTTGCCTATATCCAGAACAGTTACTCCAAGGA < 41bp 1 0.666280368419584 1 0.710178852081299 experiment 0.667439263160832 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4091338 chr11:4091345 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_20637 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:4091345-4091346
64251 chr10 43289389 43289389 1 + G A COAD 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA CACTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA < 41bp 1 0.103371550777373 1 0.0493552684783936 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289389 synonymous SNV . 0 2 hm5C_associated_SNPs_20638 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chr10 43285945 43285945 1 + A G COAD 43285946 + 43285926 43285966 41 ATTAAAACACAGGTTCTGGACGGAAGTTTACCCGGTACGAA ATTAAAACACAGGTTCTGGGCGGAAGTTTACCCGGTACGAA < 41bp 1 0.67620881984564 1 0.456951797008514 experiment 0.647582360308721 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43285946 chr10:43285945 nonsynonymous SNV 0.978 2 20 hm5C_associated_SNPs_20639 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43285934-43285952
64251 chr17 40936555 40936555 1 + C T COAD 40936572 + 40936552 40936592 41 CTCCGAGTGCCAGAATGCCGCGCAAATCTACCGCAAGGTCA CTCTGAGTGCCAGAATGCCGCGCAAATCTACCGCAAGGTCA < 41bp 1 0.617160296653893 1 0.246440708637238 experiment 0.765679406692215 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WNK4 ENSG00000126562 CDS Human protein_coding chr17:40936572 chr17:40936555 synonymous SNV . 0 4 hm5C_associated_SNPs_20641 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40936540-40936560
64251 chr19 35504557 35504557 1 + C T COAD 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGTCCAACCTTTCCCGAGCCAGCAGCGA < 41bp 1 0.0226448082254931 1 0.0727641582489014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504557 nonsynonymous SNV 0.552 3 16 hm5C_associated_SNPs_20643 0 0 3 DDX24 POSTAR2 ENCODE chr19:35504426-35504557
64251 chr19 35504557 35504557 1 + C T COAD 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGTCCAACCTTTCCCGAGCCAGCAGCGACGCAG < 41bp 1 0.770608970307606 1 0.157795161008835 experiment 0.458782059384789 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504557 nonsynonymous SNV 0.552 3 11 hm5C_associated_SNPs_20644 0 0 3 DDX24 POSTAR2 ENCODE chr19:35504426-35504557
64251 chr1 155582059 155582059 1 + G A COAD 155582039 + 155582019 155582059 41 GCGCGAAGGCGGCAGAGCTGCTACAAGATGAATATTCAGGG GCGCGAAGGCGGCAGAGCTGCTACAAGATGAATATTCAGGA < 41bp 1 0.781451685468288 1 0.398893088102341 experiment 0.437096629063424 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582039 chr1:155582059 synonymous SNV . 0 41 hm5C_associated_SNPs_20645 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155582048-155582076
64251 chr16 67578985 67578985 1 + G A COAD 67578992 + 67578972 67579012 41 CAGTATGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC CAGTATGGTGCCCACCTCTCCCTGCGCCAGCCAGGCTTGGC < 41bp 1 0.0835954505176507 1 0.0959350764751434 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578992 chr16:67578985 nonsynonymous SNV 0.994 2 14 hm5C_associated_SNPs_20646 0 0 2 LSM11 POSTAR2 ENCODE chr16:67578976-67579021
64251 chr16 66919002 66919002 1 + C T COAD 66918990 + 66918970 66919010 41 GGTTGCTTTCTCTGGGGCAACAGCTTGCATGGCCCATGTTG GGTTGCTTTCTCTGGGGCAACAGCTTGCATGGTCCATGTTG < 41bp 1 0.554770636363435 1 0.227168619632721 experiment 0.890458727273129 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918990 chr16:66919002 nonsynonymous SNV 0.997 2 33 hm5C_associated_SNPs_20648 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:66918994-66919018
64251 chr4 110581398 110581398 1 + T C COAD 110581382 + 110581362 110581402 41 ATTTATAGACATGGCCTTCCCTTGGTAACACTTACCTTGCC ATTTATAGACATGGCCTTCCCTTGGTAACACTTACCCTGCC < 41bp 1 0.67912379193408 1 0.709373593330383 experiment 0.64175241613184 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCUB ENSG00000005059 CDS Human protein_coding chr4:110581382 chr4:110581398 synonymous SNV . 0 37 hm5C_associated_SNPs_20650 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:110581366-110581412
64251 chr5 36985777 36985777 1 + G T COAD 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCTACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.119221103605033 1 0.0571417212486267 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985777 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_20651 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:36985753-36985779
64251 chr6 161519333 161519333 1 + C T COAD 161519314 + 161519294 161519334 41 TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACGCG TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACGTG < 41bp 1 0.748452164464571 1 0.967903256416321 experiment 0.503095671070857 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519314 chr6:161519333 nonsynonymous SNV 0.027 0 40 hm5C_associated_SNPs_20654 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:161519307-161519340
64251 chr9 96411465 96411465 1 + C T COAD 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GCACCAACCGCAAGCGGGTCCTCAATGTCACCAACCTCGAG < 41bp 1 0.577233316739802 1 0.632687211036682 experiment 0.845533366520395 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411465 synonymous SNV . 0 26 hm5C_associated_SNPs_20655 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chrX 107909786 107909786 1 + A T COAD 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCGAAAAAGGCAAACCCGGTCAAGTTGGTATTCCTGGACCA < 41bp 1 0.461584217354181 1 0.45640230178833 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909786 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_20658 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:107909780-107909800
64251 chr19 10789839 10789839 1 + G A COAD 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTCGCATGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG < 41bp 1 0.0843414990971623 1 0.0509595274925232 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789839 nonsynonymous SNV 0.863 4 6 hm5C_associated_SNPs_20660 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10789768-10789844
64251 chr19 10789839 10789839 1 + G A COAD 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TCGCATGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC < 41bp 1 0.0350541083248323 1 0.104661911725998 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789839 nonsynonymous SNV 0.863 4 5 hm5C_associated_SNPs_20661 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10789768-10789844
64251 chr5 148808540 148808540 1 + C A COAD 148808551 + 148808531 148808571 41 GTTGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAG GTTGGGAGTATGAGATGAAGCACTGTAGCTCAGGAAGAGAG < 41bp 1 0.507909577009986 1 0.171170264482498 experiment 0.984180845980029 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808551 chr5:148808540 . . 0 10 hm5C_associated_SNPs_20663 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr5 148808540 148808540 1 + C A COAD 148808553 + 148808533 148808573 41 TGGGAGTCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAA TGGGAGTATGAGATGAAGCACTGTAGCTCAGGAAGAGAGAA < 41bp 1 0.413306288133534 1 0.0541495978832245 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808553 chr5:148808540 . . 0 8 hm5C_associated_SNPs_20664 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr5 148808540 148808540 1 + C A COAD 148808559 + 148808539 148808579 41 TCTGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTT TATGAGATGAAGCACTGTAGCTCAGGAAGAGAGAAGTTGTT < 41bp 1 0.576720572050364 1 0.0562585890293121 experiment 0.846558855899272 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CARMN;MIR143 ENSG00000208035 ncRNA_exonic Human other chr5:148808559 chr5:148808540 . . 0 2 hm5C_associated_SNPs_20665 0 0 42 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:148808539-148808561
64251 chr11 86947708 86947708 1 + T C COAD 86947706 + 86947686 86947726 41 TTGTTTTGCATCACAGCTGCCATGTACATGTTCTTTTTCAG TTGTTTTGCATCACAGCTGCCACGTACATGTTCTTTTTCAG < 41bp 1 0.148173443405363 1 0.0432851314544678 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86947706 chr11:86947708 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_20666 0 0 4 GRWD1 POSTAR2 ENCODE chr11:86947684-86947708
64251 chr3 31658470 31658470 1 + C G COAD 31658471 + 31658451 31658491 41 TCTTGCAGTATCTGAGAGACCGATTAACAAAACAAGAGTTC TCTTGCAGTATCTGAGAGAGCGATTAACAAAACAAGAGTTC < 41bp 1 0.283059465267731 1 0.238721609115601 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31658471 chr3:31658470 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_20667 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:31658443-31658479
64251 chr1 213414700 213414700 1 + A G COAD 213414710 + 213414690 213414730 41 TAAAATCAGAACCTTTGAAACCATTCTTTACTCTTCCAGAT TAAAATCAGAGCCTTTGAAACCATTCTTTACTCTTCCAGAT < 41bp 1 0.0558461962368623 1 0.094005823135376 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213414710 chr1:213414700 synonymous SNV . 0 11 hm5C_associated_SNPs_20668 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:213414700-213414720
64251 chr12 57588466 57588466 1 + G T COAD 57588474 + 57588454 57588494 41 TGAACATGGCGAGGACGAGACCCACTGCAGTGAGTGACCAC TGAACATGGCGATGACGAGACCCACTGCAGTGAGTGACCAC < 41bp 1 0.0306553093828467 1 0.0389719903469086 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57588474 chr12:57588466 nonsynonymous SNV 0.997 1 13 hm5C_associated_SNPs_20672 0 0 2 PPIG POSTAR2 ENCODE chr12:57588456-57588482
64251 chr8 28608183 28608183 1 + C T COAD 28608178 + 28608158 28608198 41 TCTCTCCCGTTTCCAGGTGACCTCACGGTGGACATTCCGAT TCTCTCCCGTTTCCAGGTGACCTCATGGTGGACATTCCGAT < 41bp 1 0.109640470177221 1 0.03302001953125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28608178 chr8:28608183 nonsynonymous SNV 0.310 4 26 hm5C_associated_SNPs_20674 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28608171-28608223
64251 chr17 77755566 77755566 1 + C T COAD 77755547 + 77755527 77755567 41 GAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCC GAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGTC < 41bp 1 0.462391380393632 1 0.382382929325104 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755547 chr17:77755566 nonsynonymous SNV 0.003 0 40 hm5C_associated_SNPs_20675 0 0 3 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr16 89970553 89970553 1 + G C COAD 89970558 + 89970538 89970578 41 TGCTCGAGTCTTGCAGTGTGCGGCCCGACGCCAGCGTTTCC TGCTCGAGTCTTGCACTGTGCGGCCCGACGCCAGCGTTTCC < 41bp 1 0.428830337701615 1 0.334426581859589 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89970558 chr16:89970553 nonsynonymous SNV 0.105 1 16 hm5C_associated_SNPs_20677 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89970545-89970572
64251 chr5 149406394 149406394 1 + G A COAD 149406376 + 149406356 149406396 41 CATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAG CATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCAAG < 41bp 1 0.458810279946377 1 0.151879549026489 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406376 chr5:149406394 nonsynonymous SNV 0.989 1 39 hm5C_associated_SNPs_20678 0 0 1 FXR2 POSTAR2 ENCODE chr5:149406387-149406429
64251 chr5 149406394 149406394 1 + G A COAD 149406377 + 149406357 149406397 41 ATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGG ATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCAAGG < 41bp 1 0.160782136043345 1 0.156894147396088 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406377 chr5:149406394 nonsynonymous SNV 0.989 1 38 hm5C_associated_SNPs_20679 0 0 1 FXR2 POSTAR2 ENCODE chr5:149406387-149406429
64251 chr5 149406394 149406394 1 + G A COAD 149406378 + 149406358 149406398 41 TGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGC TGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCAAGGC < 41bp 1 0.120750828489363 1 0.220010548830032 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406378 chr5:149406394 nonsynonymous SNV 0.989 1 37 hm5C_associated_SNPs_20680 0 0 1 FXR2 POSTAR2 ENCODE chr5:149406387-149406429
64251 chr5 149406394 149406394 1 + G A COAD 149406379 + 149406359 149406399 41 GAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGCA GAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCAAGGCA < 41bp 1 0.127474065562194 1 0.47307762503624 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406379 chr5:149406394 nonsynonymous SNV 0.989 1 36 hm5C_associated_SNPs_20681 0 0 1 FXR2 POSTAR2 ENCODE chr5:149406387-149406429
64251 chr5 149406394 149406394 1 + G A COAD 149406393 + 149406373 149406413 41 CAGCCCCAGTTAACGTGGGGCGAGGCAGCAGCATGGGACTG CAGCCCCAGTTAACGTGGGGCAAGGCAGCAGCATGGGACTG < 41bp 1 0.36386616153645 1 0.485583573579788 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406393 chr5:149406394 nonsynonymous SNV 0.989 1 22 hm5C_associated_SNPs_20682 0 0 1 FXR2 POSTAR2 ENCODE chr5:149406387-149406429
64251 chr19 48248827 48248827 1 + G A COAD 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATGGCGGCAGAAGGCAGTGGCGTTG < 41bp 1 0.750641637055098 1 0.568234086036682 experiment 0.498716725889804 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248827 nonsynonymous SNV 0.013 1 27 hm5C_associated_SNPs_20683 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr14 105927197 105927197 1 + C T COAD 105927186 + 105927166 105927206 41 TGCCGCAGGGCGGGCCCGTGCTCTGCAGGGACGAGATGGAG TGCCGCAGGGCGGGCCCGTGCTCTGCAGGGATGAGATGGAG < 41bp 1 0.508106075290282 1 0.430985391139984 experiment 0.983787849419436 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927186 chr14:105927197 synonymous SNV . 0 32 hm5C_associated_SNPs_20684 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105927174-105927198
64251 chr19 42856465 42856465 1 + C T COAD 42856468 + 42856448 42856488 41 CCTGCCCGCTGGGCATACGCCCGCTGTCCTGACGTGGATGA CCTGCCCGCTGGGCATATGCCCGCTGTCCTGACGTGGATGA < 41bp 1 0.320660779087804 1 0.109099298715591 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42856468 chr19:42856465 synonymous SNV . 0 18 hm5C_associated_SNPs_20685 0 0 1 PRPF8 POSTAR2 ENCODE chr19:42856433-42856508
64251 chr17 57754436 57754436 1 + C T COAD 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTTG < 41bp 1 0.28222617994828 1 0.115424156188965 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754436 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_20687 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr5 82833364 82833364 1 + A G COAD 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAACGGCCAAAAAAGGGGCAGAATCAGT < 41bp 1 0.126474805711342 1 0.162393242120743 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833364 synonymous SNV . 0 18 hm5C_associated_SNPs_20689 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr1 162469795 162469795 1 + C T COAD 162469797 + 162469777 162469817 41 TCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCT TCTCCAAATGTGCCATCATGCTGTCTGTTGCTTGAACTCCT < 41bp 1 0.312111334838514 1 0.506470680236816 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162469797 chr1:162469795 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_20690 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469758-162469829
64251 chr3 31621412 31621412 1 + G A COAD 31621422 + 31621402 31621442 41 AACTTTTAGCGGCCTTACATCTATATCTACTTTCCTGCTTA AACTTTTAGCAGCCTTACATCTATATCTACTTTCCTGCTTA < 41bp 1 0.654374913907675 1 0.785038232803345 experiment 0.691250172184651 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31621422 chr3:31621412 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_20691 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:31621353-31621416
64251 chr16 4431738 4431738 1 + T C COAD 4431752 + 4431732 4431772 41 GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC GCCTCTCCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC < 41bp 1 0.582453709990064 1 0.101737946271896 experiment 0.835092580019871 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431752 chr16:4431738 nonsynonymous SNV 0.885 1 7 hm5C_associated_SNPs_20692 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4431702-4431743
64251 chr6 30856994 30856994 1 + C T COAD 30857005 + 30856985 30857025 41 GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG GAGCAGTGATGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG < 41bp 1 0.294694893032719 1 0.389248043298721 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30857005 chr6:30856994 synonymous SNV . 0 10 hm5C_associated_SNPs_20693 0 0 2 PPIG POSTAR2 ENCODE chr6:30856990-30857105
64251 chr17 41585012 41585012 1 + G A COAD 41585007 + 41584987 41585027 41 GATCATCATGTTGGACGAGGCACATGAGAGGACAATTCACA GATCATCATGTTGGACGAGGCACATAAGAGGACAATTCACA < 41bp 1 0.22737445941745 1 0.118501275777817 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585007 chr17:41585012 nonsynonymous SNV 0.726 4 26 hm5C_associated_SNPs_20695 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:41584987-41585012
64251 chrX 153641559 153641559 1 + G T COAD 153641548 + 153641528 153641568 41 CTTTCCTGTCCTCTAGGGATCCTGAAACTCCGCCACATCTG CTTTCCTGTCCTCTAGGGATCCTGAAACTCCTCCACATCTG < 41bp 1 0.353034361279031 1 0.100788027048111 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAZ ENSG00000102125 CDS Human protein_coding chrX:153641548 chrX:153641559 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_20699 0 0 2 EFTUD2 POSTAR2 ENCODE chrX:153641539-153641567
64251 chr8 144332293 144332293 1 + C T COAD 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGTGGATCTT < 41bp 1 0.213667710095228 1 0.189714044332504 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332293 nonsynonymous SNV 0.123 1 34 hm5C_associated_SNPs_20700 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:144332257-144332293
64251 chr19 11141565 11141565 1 + A C COAD 11141582 + 11141562 11141602 41 CTCACCAGGTAAAAGCGGGCCGGGCCCCAGGTCGAGGAGAA CTCCCCAGGTAAAAGCGGGCCGGGCCCCAGGTCGAGGAGAA < 41bp 1 0.202960838849361 1 0.347396731376648 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141582 chr19:11141565 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_20701 0 0 17 AARS POSTAR2 ENCODE chr19:11141543-11141576
64251 chr2 46803717 46803717 1 + C T COAD 46803731 + 46803711 46803751 41 AGATGACCCCAAAACTTTAGCAAGACTGAATGATATGAAAG AGATGATCCCAAAACTTTAGCAAGACTGAATGATATGAAAG < 41bp 1 0.647989727544266 1 0.541305661201477 experiment 0.704020544911468 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOQ ENSG00000119729 CDS Human protein_coding chr2:46803731 chr2:46803717 synonymous SNV . 0 7 hm5C_associated_SNPs_20703 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:46803696-46803726
64251 chr11 63719956 63719956 1 + T C COAD 63719969 + 63719949 63719989 41 TACCTCATCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT TACCTCACCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT < 41bp 1 0.612259259100026 1 0.718236207962036 experiment 0.775481481799948 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719969 chr11:63719956 nonsynonymous SNV 0.991 2 8 hm5C_associated_SNPs_20704 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:63719955-63719956
64251 chr1 218504392 218504392 1 + G C COAD 218504390 + 218504370 218504410 41 GGACAAGGAAAGTGATGGGCCAGATGACAGCAGACCAGAAT GGACAAGGAAAGTGATGGGCCACATGACAGCAGACCAGAAT < 41bp 1 0.372800961209253 1 0.266975879669189 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218504390 chr1:218504392 nonsynonymous SNV 0.003 2 23 hm5C_associated_SNPs_20705 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:218504331-218504465
64251 chr1 171501777 171501777 1 + G A COAD 171501758 + 171501738 171501778 41 AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCAT < 41bp 1 0.632620930946527 1 0.774771928787231 experiment 0.734758138106946 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171501758 chr1:171501777 nonsynonymous SNV 0.952 1 40 hm5C_associated_SNPs_20706 0 0 16 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:171501740-171501779
64251 chr15 42059323 42059323 1 + G A COAD 42059304 + 42059284 42059324 41 GATGCAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGC GATGCAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGAC < 41bp 1 0.461297494880068 1 0.742642819881439 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059304 chr15:42059323 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_20709 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:42059282-42059341
64251 chr11 126124304 126124304 1 + C T COAD 126124316 + 126124296 126124336 41 TATCAGAACGTGCTCAGGAACACTGAAGTCATGGTGAGTGG TATCAGAATGTGCTCAGGAACACTGAAGTCATGGTGAGTGG < 41bp 1 0.661040193463112 1 0.0582033097743988 experiment 0.677919613073775 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM118B ENSG00000197798 CDS Human protein_coding chr11:126124316 chr11:126124304 synonymous SNV . 0 9 hm5C_associated_SNPs_20710 0 0 3 PRPF8 POSTAR2 ENCODE chr11:126124296-126124371
64251 chr5 71493386 71493386 1 + C T COAD 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCCGTCCCTCATTGGATC < 41bp 1 0.181437589590954 1 0.160320609807968 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493386 nonsynonymous SNV 0.601 3 28 hm5C_associated_SNPs_20712 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493386 71493386 1 + C T COAD 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCGTCCCTCATTGGATCCGAG < 41bp 1 0.0167045988462703 1 0.0934779047966003 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493386 nonsynonymous SNV 0.601 3 24 hm5C_associated_SNPs_20713 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr12 31242360 31242360 1 + G A COAD 31242340 + 31242320 31242360 41 TTTCTCCTTTGCTGCAGAACCTTTGTGTAAATGAAGACGTG TTTCTCCTTTGCTGCAGAACCTTTGTGTAAATGAAGACGTA < 41bp 1 0.178886487055053 1 0.100646138191223 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242340 chr12:31242360 synonymous SNV . 0 41 hm5C_associated_SNPs_20714 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:31242321-31242371
64251 chr6 31594935 31594935 1 + G A COAD 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCCCCACCTCACCAGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.314963511691248 1 0.0947019755840302 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594935 nonsynonymous SNV 0.995 1 17 hm5C_associated_SNPs_20715 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594935 31594935 1 + G A COAD 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCCCCACCTCACCAGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.266620200037898 1 0.111638307571411 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594935 nonsynonymous SNV 0.995 1 16 hm5C_associated_SNPs_20716 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594935 31594935 1 + G A COAD 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCCCCACCTCACCAGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.325194310945789 1 0.167896419763565 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594935 nonsynonymous SNV 0.995 1 15 hm5C_associated_SNPs_20717 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594935 31594935 1 + G A COAD 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCCCCACCTCACCAGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.549831242520772 1 0.479517370462418 experiment 0.900337514958457 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594935 nonsynonymous SNV 0.995 1 14 hm5C_associated_SNPs_20718 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr11 108206581 108206581 1 + G A COAD 108206601 + 108206581 108206621 41 GACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT AACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT < 41bp 1 0.176483462405723 1 0.204371392726898 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108206601 chr11:108206581 nonsynonymous SNV 1.000 5 1 hm5C_associated_SNPs_20720 0 0 5 BUD13 POSTAR2 ENCODE chr11:108206569-108206614
64251 chr16 449400 449400 1 + G A COAD 449415 + 449395 449435 41 TTGCCGAGCACTACCAGGACCTGCGGAGGAAGCCCTTCTAC TTGCCAAGCACTACCAGGACCTGCGGAGGAAGCCCTTCTAC < 41bp 1 0.743650257665356 1 0.390757918357849 experiment 0.512699484669289 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NME4 ENSG00000103202 CDS Human protein_coding chr16:449415 chr16:449400 nonsynonymous SNV 0.778 0 6 hm5C_associated_SNPs_20722 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:449380-449400
64251 chr2 227729833 227729833 1 + G A COAD 227729840 + 227729820 227729860 41 GAGCTGTGCTGTAGGTTTCTCAGGTAAGGGAGACAAAATTT GAGCTGTGCTGTAAGTTTCTCAGGTAAGGGAGACAAAATTT < 41bp 1 0.653636499310703 1 0.492668092250824 experiment 0.692727001378594 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RHBDD1 ENSG00000144468 CDS Human protein_coding chr2:227729840 chr2:227729833 nonsynonymous SNV 0.938 5 14 hm5C_associated_SNPs_20723 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:227729795-227729833
64251 chr15 96877532 96877532 1 + G A COAD 96877544 + 96877524 96877564 41 TCAGCGCCGTCGAGTGGGCCCGGAACATCCCCTTCTTCCCC TCAGCGCCATCGAGTGGGCCCGGAACATCCCCTTCTTCCCC < 41bp 1 0.752873884356269 1 0.463978469371796 experiment 0.494252231287462 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877544 chr15:96877532 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_20729 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:96877460-96877560
64251 chr1 230384963 230384963 1 + A G COAD 230384969 + 230384949 230384989 41 ATTCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCC ATTCAAGTGGGATTGCATGACGCCTGAGCAGAGAAGGTCCC < 41bp 1 0.528431795550796 1 0.390819668769836 experiment 0.943136408898408 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384969 chr1:230384963 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_20730 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chr1 230384963 230384963 1 + A G COAD 230384971 + 230384951 230384991 41 TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCCGG TCAAGTGGGATTGCATGACGCCTGAGCAGAGAAGGTCCCGG < 41bp 1 0.366958723857119 1 0.0735989511013031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384971 chr1:230384963 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_20731 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chrX 11781098 11781098 1 + A G COAD 11781084 + 11781064 11781104 41 CACGTTATGCCACATGCCAACATGAACGTGCATTATATCCC CACGTTATGCCACATGCCAACATGAACGTGCATTGTATCCC < 41bp 1 0.594364357339142 1 0.0483740866184235 experiment 0.811271285321717 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MSL3 ENSG00000005302 CDS Human protein_coding chrX:11781084 chrX:11781098 nonsynonymous SNV 0.999 2 35 hm5C_associated_SNPs_20732 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:11781087-11781109
64251 chr12 110032884 110032884 1 + G A COAD 110032880 + 110032860 110032900 41 CTGAATGCCCTCGGCGTGGGCCACGCCTCTCTGGACCAGCT CTGAATGCCCTCGGCGTGGGCCACACCTCTCTGGACCAGCT < 41bp 1 0.285995988125116 1 0.121234834194183 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MVK ENSG00000110921 CDS Human protein_coding chr12:110032880 chr12:110032884 nonsynonymous SNV 0.235 1 25 hm5C_associated_SNPs_20733 0 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr7 140379043 140379043 1 + G A COAD 140379056 + 140379036 140379076 41 CCTCTGCGCCCCTTTGTCACCAGAGAAGTCTTGGTGGAAAC CCTCTGCACCCCTTTGTCACCAGAGAAGTCTTGGTGGAAAC < 41bp 1 0.570935841063828 1 0.734023034572601 experiment 0.858128317872344 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140379056 chr7:140379043 nonsynonymous SNV 0.883 0 8 hm5C_associated_SNPs_20734 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140379026-140379051
64251 chr19 6368637 6368637 1 + G T COAD 6368635 + 6368615 6368655 41 AGGTTCTGGTCCACCCTCCCCAGGACGGTGAGGATGAGCCC AGGTTCTGGTCCACCCTCCCCATGACGGTGAGGATGAGCCC < 41bp 1 0.644318610585581 1 0.111935287714005 experiment 0.711362778828837 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6368635 chr19:6368637 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_20737 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:6368573-6368668
64251 chr3 50091791 50091791 1 + C T COAD 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCATCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG < 41bp 1 0.0589785914824919 1 0.0194380879402161 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091791 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_20739 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:50091779-50091805
64251 chr8 104452459 104452459 1 + T A COAD 104452461 + 104452441 104452481 41 GATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAATGCT GATCTGATGAAATGAACAATCGCCTGTGGAAAGCTAATGCT < 41bp 1 0.775959332662013 1 0.425932675600052 experiment 0.448081334675974 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452461 chr8:104452459 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_20742 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104452376-104452483
64251 chr14 105936304 105936304 1 + T C COAD 105936285 + 105936265 105936305 41 CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGCT < 41bp 1 0.508479975769267 1 0.678425908088684 experiment 0.983040048461467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936285 chr14:105936304 nonsynonymous SNV 0.989 1 40 hm5C_associated_SNPs_20744 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr14 105936304 105936304 1 + T C COAD 105936315 + 105936295 105936335 41 GATGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGG GATGACGTGCTCTACATGGCCACAGAGGAGACCAGGTGGGG < 41bp 1 0.557400716677323 1 0.757834672927856 experiment 0.885198566645354 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936315 chr14:105936304 nonsynonymous SNV 0.989 1 10 hm5C_associated_SNPs_20745 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr14 105936304 105936304 1 + T C COAD 105936317 + 105936297 105936337 41 TGACGTGTTCTACATGGCCACAGAGGAGACCAGGTGGGGCC TGACGTGCTCTACATGGCCACAGAGGAGACCAGGTGGGGCC < 41bp 1 0.62621413888414 1 0.744315326213837 experiment 0.74757172223172 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936317 chr14:105936304 nonsynonymous SNV 0.989 1 8 hm5C_associated_SNPs_20746 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105936275-105936313
64251 chr9 35389883 35389883 1 + G A COAD 35389874 + 35389854 35389894 41 ACCTCCAGAGGAACAAGGGCCCAGCATTCGGAACCTGGATT ACCTCCAGAGGAACAAGGGCCCAGCATTCAGAACCTGGATT < 41bp 1 0.0762310902433622 1 0.104371607303619 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UNC13B ENSG00000198722 CDS Human protein_coding chr9:35389874 chr9:35389883 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_20748 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:35389867-35389893
64251 chr7 87005027 87005027 1 + A G COAD 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT CAGCATTAACTAGTGAGGAGCGAGCTCGATGGGCTAAGGTT < 41bp 1 0.331125428162424 1 0.422387301921844 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005027 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_20752 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr16 67662309 67662309 1 + G A COAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCAGGGAGAAGCCTTACGCCTGCAGCCACTGCG < 41bp 1 0.247194007926442 1 0.204499185085297 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662309 nonsynonymous SNV 0.816 4 11 hm5C_associated_SNPs_20754 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:67662278-67662309
64251 chr12 71977626 71977626 1 + G A COAD 71977616 + 71977596 71977636 41 GAACATGCTCACGGGAGTCTCCAGTGCCGTGCTGGCTGGTG GAACATGCTCACGGGAGTCTCCAGTGCCGTACTGGCTGGTG < 41bp 1 0.465961649866001 1 0.804587841033936 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977616 chr12:71977626 synonymous SNV . 0 31 hm5C_associated_SNPs_20755 0 0 2 RPS3 POSTAR2 ENCODE chr12:71977625-71977702
64251 chr16 30096341 30096341 1 + G T COAD 30096347 + 30096327 30096367 41 CCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC CCCCAAGAGACACGTGGCATCCCCTCCAAGAAGCCCGTGGC < 41bp 1 0.316594357873112 1 0.239750683307648 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096347 chr16:30096341 synonymous SNV . 0 15 hm5C_associated_SNPs_20757 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30096303-30096356
64251 chr11 244741 244741 1 + G A COAD 244747 + 244727 244767 41 TAAAATTAAACATCGGGGACCTACAGGTTACAAAGGTGAGA TAAAATTAAACATCAGGGACCTACAGGTTACAAAGGTGAGA < 41bp 1 0.316884040433787 1 0.15288171172142 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:244747 chr11:244741 nonsynonymous SNV 0.968 2 15 hm5C_associated_SNPs_20758 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:244723-244752
64251 chr19 10886448 10886448 1 + T C COAD 10886461 + 10886441 10886481 41 CCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTT CCAGACACCGAGTACCAGATCAAGGACATGATCCTGCAGTT < 41bp 1 0.614055932346319 1 0.828719854354858 experiment 0.771888135307362 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886461 chr19:10886448 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_20762 0 0 4 DDX24 POSTAR2 ENCODE chr19:10886377-10886453
64251 chr5 71491928 71491928 1 + G A COAD 71491948 + 71491928 71491968 41 GAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGATGA AAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGATGA < 41bp 1 0.0866685267698601 1 0.12386617064476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491948 chr5:71491928 nonsynonymous SNV 0.951 2 1 hm5C_associated_SNPs_20763 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71491898-71491930
64251 chr6 144747512 144747512 1 + G A COAD 144747498 + 144747478 144747518 41 AGATCCTGCTCAGCTGGGTGCGTCAGACCACCAGGCCCTAC AGATCCTGCTCAGCTGGGTGCGTCAGACCACCAGACCCTAC < 41bp 1 0.258791656425398 1 0.115828961133957 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144747498 chr6:144747512 synonymous SNV . 0 35 hm5C_associated_SNPs_20766 0 0 5 EIF3H POSTAR2 ENCODE chr6:144747461-144747527
64251 chr14 102445749 102445749 1 + C T COAD 102445731 + 102445711 102445751 41 CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTACGA CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTATGA < 41bp 1 0.203208279956009 1 0.605157017707825 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102445731 chr14:102445749 synonymous SNV . 0 39 hm5C_associated_SNPs_20767 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102445724-102445761
64251 chr19 18679377 18679377 1 + A C COAD 18679364 + 18679344 18679384 41 TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCCGCCTGGC < 41bp 1 0.163051911345105 1 0.296547621488571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679364 chr19:18679377 nonsynonymous SNV 0.002 0 34 hm5C_associated_SNPs_20768 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:18679368-18679389
64251 chr20 44526685 44526685 1 + C T COAD 44526703 + 44526683 44526723 41 GACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTC GATAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTC < 41bp 1 0.726051472757657 1 0.709046125411987 experiment 0.547897054484687 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44526703 chr20:44526685 synonymous SNV . 0 3 hm5C_associated_SNPs_20769 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:44526677-44526707
64251 chr5 176468195 176468195 1 + C T COAD 176468185 + 176468165 176468205 41 AACACCCAGTGTAAGGTTTGCTGCGCCTTGCTTATTTCTGA AACACCCAGTGTAAGGTTTGCTGCGCCTTGTTTATTTCTGA < 41bp 1 0.426910484551455 1 0.119156390428543 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176468185 chr5:176468195 nonsynonymous SNV 0.937 4 31 hm5C_associated_SNPs_20770 0 0 2 PPIG POSTAR2 ENCODE chr5:176468127-176468225
64251 chr19 45801166 45801166 1 + C A COAD 45801148 + 45801128 45801168 41 CCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCC CCCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCACC < 41bp 1 0.349444360676973 1 0.265886813402176 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801148 chr19:45801166 nonsynonymous SNV 0.992 0 39 hm5C_associated_SNPs_20771 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801166 45801166 1 + C A COAD 45801149 + 45801129 45801169 41 CCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCA CCATGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCACCA < 41bp 1 0.355073937990103 1 0.157553374767303 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801149 chr19:45801166 nonsynonymous SNV 0.992 0 38 hm5C_associated_SNPs_20772 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801166 45801166 1 + C A COAD 45801152 + 45801132 45801172 41 TGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCACCA TGAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCACCACCA < 41bp 1 0.53162106113114 1 0.792040228843689 experiment 0.93675787773772 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801152 chr19:45801166 nonsynonymous SNV 0.992 0 35 hm5C_associated_SNPs_20773 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr19 45801166 45801166 1 + C A COAD 45801153 + 45801133 45801173 41 GAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCCCCACCAC GAGGCTGCACCCCTGCCCGCCGGGCGGCCCCGCACCACCAC < 41bp 1 0.635736500663341 1 0.931148409843445 experiment 0.728526998673318 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45801153 chr19:45801166 nonsynonymous SNV 0.992 0 34 hm5C_associated_SNPs_20774 0 0 3 IGF2BP1 POSTAR2 ENCODE chr19:45801106-45801179
64251 chr17 37360385 37360385 1 + C T COAD 37360369 + 37360349 37360389 41 AAGGTGAAGGGGAATGTGTTCAAAAACAAGCGGATTCTCAT AAGGTGAAGGGGAATGTGTTCAAAAACAAGCGGATTTTCAT < 41bp 1 0.60767556218297 1 0.366752326488495 experiment 0.784648875634061 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360369 chr17:37360385 nonsynonymous SNV 0.997 3 37 hm5C_associated_SNPs_20775 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:37360348-37360405
64251 chr9 96411440 96411440 1 + G A COAD 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG ACACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG < 41bp 1 0.472142893507484 1 0.36801078915596 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411440 nonsynonymous SNV 0.995 1 1 hm5C_associated_SNPs_20776 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:96411414-96411440
64251 chr7 70252226 70252226 1 + C T COAD 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCGGCCACAAGGATGGTCCCAGTGTGCAGAACTTTAGCA < 41bp 1 0.142859920684513 1 0.0729041397571564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252226 synonymous SNV . 0 19 hm5C_associated_SNPs_20777 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr4 3184085 3184085 1 + T C COAD 3184095 + 3184075 3184115 41 TTATAGGTGTTGGAGATGTTCATTCTTGTCCTGCAGCAGTG TTATAGGTGTCGGAGATGTTCATTCTTGTCCTGCAGCAGTG < 41bp 1 0.0669426654413366 1 0.0802604258060455 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3184095 chr4:3184085 nonsynonymous SNV 0.984 3 11 hm5C_associated_SNPs_20778 0 0 3 SF3A3 POSTAR2 ENCODE chr4:3184028-3184087
64251 chr2 71577133 71577133 1 + G A COAD 71577126 + 71577106 71577146 41 TAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAA TAATTTCATCTGTAAGCCAGCAAGAGCAGATCCCACATGAA < 41bp 1 0.497354532291927 1 0.49371924996376 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71577126 chr2:71577133 nonsynonymous SNV 0.823 3 28 hm5C_associated_SNPs_20779 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:71576926-71577160
64251 chr11 18380169 18380169 1 + G A COAD 18380158 + 18380138 18380178 41 GACATTTCTGGTCCTGCTTTCCTGTTAATACGCCATTCCTA GACATTTCTGGTCCTGCTTTCCTGTTAATACACCATTCCTA < 41bp 1 0.143813540063265 1 0.0982573628425598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF2H1 ENSG00000110768 CDS Human protein_coding chr11:18380158 chr11:18380169 synonymous SNV . 0 32 hm5C_associated_SNPs_20780 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:18380134-18380183
64251 chr1 164790823 164790823 1 + G T COAD 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAGACAGGAGGATACAGTGATGTACTCGCAGCCAG < 41bp 1 0.678763109735108 1 0.435832232236862 experiment 0.642473780529784 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790823 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_20783 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr14 35649922 35649922 1 + A T COAD 35649907 + 35649887 35649927 41 ATTTGAGAACTTCATAAAATCTCGTCCTCCTTTTGATGTTG ATTTGAGAACTTCATAAAATCTCGTCCTCCTTTTGTTGTTG < 41bp 1 0.504438423941485 1 0.169967621564865 experiment 0.991123152117031 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35649907 chr14:35649922 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_20784 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:35649900-35649930
64251 chr6 26124576 26124576 1 + A G COAD 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAG < 41bp 1 0.605215054478939 1 0.136146605014801 experiment 0.789569891042122 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124576 nonsynonymous SNV 0.864 2 41 hm5C_associated_SNPs_20785 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:26124560-26124580
64251 chr12 22199377 22199377 1 + C T COAD 22199363 + 22199343 22199383 41 GGCCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGCCCTAAT GGCCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGTCCTAAT < 41bp 1 0.685165791481573 1 0.0887323021888733 experiment 0.629668417036853 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22199363 chr12:22199377 nonsynonymous SNV 0.957 4 35 hm5C_associated_SNPs_20786 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:22199373-22199394
64251 chr12 22199377 22199377 1 + C T COAD 22199365 + 22199345 22199385 41 CCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGCCCTAATTC CCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGTCCTAATTC < 41bp 1 0.747236826055333 1 0.256799131631851 experiment 0.505526347889334 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22199365 chr12:22199377 nonsynonymous SNV 0.957 4 33 hm5C_associated_SNPs_20787 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:22199373-22199394
64251 chr7 5643529 5643529 1 + C T COAD 5643510 + 5643490 5643530 41 ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACTG < 41bp 1 0.367117765765315 1 0.0687339305877686 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643510 chr7:5643529 nonsynonymous SNV 0.971 3 40 hm5C_associated_SNPs_20788 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr7:5643520-5643541
64251 chr2 27302046 27302046 1 + C T COAD 27302048 + 27302028 27302068 41 ACACAGGTTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAG ACACAGGTTCCAGTGGGGTCCTCAGCCCCGGGGGGCCCCAG < 41bp 1 0.537454286839729 1 0.292233288288116 experiment 0.925091426320541 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302048 chr2:27302046 nonsynonymous SNV 0.071 0 19 hm5C_associated_SNPs_20789 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302046 27302046 1 + C T COAD 27302063 + 27302043 27302083 41 GGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC GGGTCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC < 41bp 1 0.367635368186749 1 0.0798784196376801 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302063 chr2:27302046 nonsynonymous SNV 0.071 0 4 hm5C_associated_SNPs_20790 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302046 27302046 1 + C T COAD 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGTCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC < 41bp 1 0.36869609048386 1 0.599306583404541 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302046 nonsynonymous SNV 0.071 0 3 hm5C_associated_SNPs_20791 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302046 27302046 1 + C T COAD 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GTCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG < 41bp 1 0.628453120729614 1 0.738491177558899 experiment 0.743093758540771 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302046 nonsynonymous SNV 0.071 0 2 hm5C_associated_SNPs_20792 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302046 27302046 1 + C T COAD 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG TCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG < 41bp 1 0.635599175820158 1 0.808544814586639 experiment 0.728801648359684 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302046 nonsynonymous SNV 0.071 0 1 hm5C_associated_SNPs_20793 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr14 102901117 102901117 1 + A G COAD 102901100 + 102901080 102901120 41 CCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCCTCAGCT CCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCCTCGGCT < 41bp 1 0.148234934722569 1 0.200301617383957 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102901100 chr14:102901117 nonsynonymous SNV 0.940 0 38 hm5C_associated_SNPs_20796 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102901098-102901118
64251 chr2 70122252 70122252 1 + C T COAD 70122272 + 70122252 70122292 41 CGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG TGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG < 41bp 1 0.778756814538902 1 0.571089744567871 experiment 0.442486370922195 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122272 chr2:70122252 nonsynonymous SNV 0.950 3 1 hm5C_associated_SNPs_20797 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:70122223-70122274
64251 chr5 54720592 54720592 1 + T G COAD 54720581 + 54720561 54720601 41 CAAGAGAGATATTGTGTTTGCTGCCAGCCTCTACTTGTAGA CAAGAGAGATATTGTGTTTGCTGCCAGCCTCGACTTGTAGA < 41bp 1 0.273415766530839 1 0.124786466360092 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54720581 chr5:54720592 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_20798 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54720559-54720621
64251 chr16 14403167 14403167 1 + G A COAD 14403172 + 14403152 14403192 41 AAATGAGGGACTTTTGGGGGCAGATGTGTTTCCATTCCACT AAATGAGGGACTTTTAGGGGCAGATGTGTTTCCATTCCACT < 41bp 1 0.339286552138706 1 0.380057960748672 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR365A ENSG00000199130 ncRNA_exonic Human miRNA chr16:14403172 chr16:14403167 . . 0 16 hm5C_associated_SNPs_20804 0 0 2 QKI POSTAR2 GSE21578,GSM545211 chr16:14403156-14403179
64251 chr8 145727066 145727066 1 + T C COAD 145727063 + 145727043 145727083 41 CCACGACAAGGCCCACCACACCCTGGCTGACCTGAAGCGCC CCACGACAAGGCCCACCACACCCCGGCTGACCTGAAGCGCC < 41bp 1 0.408505557841725 1 0.400216639041901 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727063 chr8:145727066 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_20805 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145727050-145727084
64251 chr15 29385301 29385301 1 + G T COAD 29385286 + 29385266 29385306 41 GCCCTCCTTCAGTTCCAGGGCCCTGCGAACCAGAAGACCTC GCCCTCCTTCAGTTCCAGGGCCCTGCGAACCAGAATACCTC < 41bp 1 0.0609837501263555 1 0.272961795330048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient APBA2 ENSG00000034053 CDS Human protein_coding chr15:29385286 chr15:29385301 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_20811 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29385290-29385328
64251 chr19 7620161 7620161 1 + C T COAD 7620146 + 7620126 7620166 41 CCATCCCAGCATGAGCTCTACGAGAAGGTTTTCTCCAGGCG CCATCCCAGCATGAGCTCTACGAGAAGGTTTTCTCTAGGCG < 41bp 1 0.625596465340382 1 0.41898500919342 experiment 0.748807069319237 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620146 chr19:7620161 synonymous SNV . 0 36 hm5C_associated_SNPs_20813 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7620154-7620178
64251 chr3 47041680 47041680 1 + G T COAD 47041673 + 47041653 47041693 41 CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGGATCAGGC CCTTTGACCTGGGCCTGGAACGGTCTATTGTAGGATCAGGC < 41bp 1 0.100814596128436 1 0.761211454868317 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041673 chr3:47041680 nonsynonymous SNV 0.668 2 28 hm5C_associated_SNPs_20814 0 0 1 EIF3H POSTAR2 ENCODE chr3:47041678-47041705
64251 chr19 11114031 11114031 1 + G A COAD 11114029 + 11114009 11114049 41 TTTCTAGGTATGAAGTAGCTCCGAGGTCTGATAGTGAAGAA TTTCTAGGTATGAAGTAGCTCCAAGGTCTGATAGTGAAGAA < 41bp 1 0.161363649126119 1 0.393238991498947 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114029 chr19:11114031 synonymous SNV . 0 23 hm5C_associated_SNPs_20815 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr19 11114031 11114031 1 + G A COAD 11114036 + 11114016 11114056 41 GTATGAAGTAGCTCCGAGGTCTGATAGTGAAGAAAGTGGCT GTATGAAGTAGCTCCAAGGTCTGATAGTGAAGAAAGTGGCT < 41bp 1 0.132548447778968 1 0.114153295755386 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114036 chr19:11114031 synonymous SNV . 0 16 hm5C_associated_SNPs_20816 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr1 984306 984306 1 + C A COAD 984297 + 984277 984317 41 GCCGCTCCTTCCTGGCCTTCCCCACTCTCCGCGCCTACCAC GCCGCTCCTTCCTGGCCTTCCCCACTCTCAGCGCCTACCAC < 41bp 1 0.106216134509276 1 0.0437875092029572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984297 chr1:984306 nonsynonymous SNV 0.107 0 30 hm5C_associated_SNPs_20817 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:984301-984316
64251 chr1 183094636 183094636 1 + G T COAD 183094656 + 183094636 183094676 41 GCTTGTGACCCTGGATTCTACAATCTGCAGAGTGGGCAAGG TCTTGTGACCCTGGATTCTACAATCTGCAGAGTGGGCAAGG < 41bp 1 0.147850609510086 1 0.162043899297714 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183094656 chr1:183094636 nonsynonymous SNV 0.130 0 1 hm5C_associated_SNPs_20818 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr1:183094587-183094662
64251 chr6 131904598 131904598 1 + G A COAD 131904583 + 131904563 131904603 41 GCACACCAGTCGTGGGAGGTCTGACATACAGAGAAGGTCTC GCACACCAGTCGTGGGAGGTCTGACATACAGAGAAAGTCTC < 41bp 1 0.498917519464332 1 0.133423775434494 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARG1 ENSG00000118520 CDS Human protein_coding chr6:131904583 chr6:131904598 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_20819 0 0 1 PPIG POSTAR2 ENCODE chr6:131904520-131904598
64251 chr6 36569545 36569545 1 + G A COAD 36569553 + 36569533 36569573 41 AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGGT AAATCACAAGCCATCCCGATCCTTCTCTAGGTCTCGTAGGT < 41bp 1 0.018451802608114 1 0.0380212962627411 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36569553 chr6:36569545 synonymous SNV . 0 13 hm5C_associated_SNPs_20820 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36569539-36569575
64251 chr2 27263669 27263669 1 + C T COAD 27263686 + 27263666 27263706 41 TTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGG TTTTTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAGG < 41bp 1 0.26943631113814 1 0.0518357157707214 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27263686 chr2:27263669 synonymous SNV . 0 4 hm5C_associated_SNPs_20821 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:27263640-27263680
64251 chr17 37360859 37360859 1 + G A COAD 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAAATCATCA < 41bp 1 0.29325025674819 1 0.342692792415619 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360859 synonymous SNV . 0 34 hm5C_associated_SNPs_20824 0 0 55 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:37360859-37360883
64251 chr17 37360859 37360859 1 + G A COAD 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGCCAAGAAGGAGGAAATCATCAAGACTTTATCCAAGGA < 41bp 1 0.619029867034412 1 0.174684196710587 experiment 0.761940265931175 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360859 synonymous SNV . 0 18 hm5C_associated_SNPs_20825 0 0 55 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:37360859-37360883
64251 chr17 37360859 37360859 1 + G A COAD 37360876 + 37360856 37360896 41 GGAGATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA GGAAATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA < 41bp 1 0.497510270092984 1 0.817286252975464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360876 chr17:37360859 synonymous SNV . 0 4 hm5C_associated_SNPs_20826 0 0 55 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:37360859-37360883
64251 chr16 2011256 2011256 1 + G C COAD 2011268 + 2011248 2011288 41 CATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG CATCATGTCCATGTATGAAGCCGAAATGCAGTGGAAGAGGG < 41bp 1 0.554927005318693 1 0.36777126789093 experiment 0.890145989362614 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011268 chr16:2011256 nonsynonymous SNV 0.060 4 9 hm5C_associated_SNPs_20827 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr16 2011256 2011256 1 + G C COAD 2011269 + 2011249 2011289 41 ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA ATCATGTCCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA < 41bp 1 0.538543669519361 1 0.470113694667816 experiment 0.922912660961277 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011269 chr16:2011256 nonsynonymous SNV 0.060 4 8 hm5C_associated_SNPs_20828 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr16 2011256 2011256 1 + G C COAD 2011276 + 2011256 2011296 41 GCATGTATGAAGCCGAAATGCAGTGGAAGAGGGACTAGTAC CCATGTATGAAGCCGAAATGCAGTGGAAGAGGGACTAGTAC < 41bp 1 0.689180479157338 1 0.590249300003052 experiment 0.621639041685323 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011276 chr16:2011256 nonsynonymous SNV 0.060 4 1 hm5C_associated_SNPs_20829 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr10 60580132 60580132 1 + G A COAD 60580149 + 60580129 60580169 41 ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT ATCAATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT < 41bp 1 0.0843026967202713 1 0.0954337120056152 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60580149 chr10:60580132 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_20830 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60580120-60580140
64251 chr8 37555977 37555977 1 + C A COAD 37555990 + 37555970 37556010 41 TCTGCACCTCCCCCCGCCCGCCGCCCCCGGCAGCCCCGGGT TCTGCACATCCCCCCGCCCGCCGCCCCCGGCAGCCCCGGGT < 41bp 1 0.188814999967582 1 0.352629005908966 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF703 ENSG00000183779 CDS Human protein_coding chr8:37555990 chr8:37555977 nonsynonymous SNV 0.994 1 8 hm5C_associated_SNPs_20831 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:37555917-37556043
64251 chr17 76399752 76399752 1 + C T COAD 76399746 + 76399726 76399766 41 ATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGAC ATGCTGCATGCCCAGACCTTCCACAGTAACTCTCTTTTGAC < 41bp 1 0.419976801654738 1 0.0604789555072784 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGS1 ENSG00000087157 CDS Human protein_coding chr17:76399746 chr17:76399752 synonymous SNV . 0 27 hm5C_associated_SNPs_20832 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:76399723-76399757
64251 chr5 61669589 61669589 1 + T C COAD 61669583 + 61669563 61669603 41 ATAATGCACCATCCACCAAACCAGATTGATGACTTAGAGAC ATAATGCACCATCCACCAAACCAGATCGATGACTTAGAGAC < 41bp 1 0.61615523296855 1 0.237308740615845 experiment 0.7676895340629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF2A ENSG00000068796 CDS Human protein_coding chr5:61669583 chr5:61669589 synonymous SNV . 0 27 hm5C_associated_SNPs_20834 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:61669564-61669602
64251 chr12 52636889 52636889 1 + C A COAD 52636873 + 52636853 52636893 41 AATGAGATTTCAGAGATGAACCGGGCCATCCAGAGGCTGCA AATGAGATTTCAGAGATGAACCGGGCCATCCAGAGGATGCA < 41bp 1 0.347024362155308 1 0.223008841276169 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KRT7 ENSG00000135480 CDS Human protein_coding chr12:52636873 chr12:52636889 nonsynonymous SNV 0.999 3 37 hm5C_associated_SNPs_20835 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52636880-52636900
64251 chr12 52636889 52636889 1 + C A COAD 52636909 + 52636889 52636929 41 CTGCAGGCTGAGATCGACAACATCAAGAACCAGGTGGGACA ATGCAGGCTGAGATCGACAACATCAAGAACCAGGTGGGACA < 41bp 1 0.381510602763357 1 0.0664180815219879 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KRT7 ENSG00000135480 CDS Human protein_coding chr12:52636909 chr12:52636889 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_20836 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52636880-52636900
64251 chr17 1946247 1946247 1 + C T COAD 1946262 + 1946242 1946282 41 GGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAAC GGACATTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAAC < 41bp 1 0.100742170593608 1 0.0282630920410156 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946262 chr17:1946247 nonsynonymous SNV 0.996 1 6 hm5C_associated_SNPs_20837 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:1946202-1946252
64251 chr11 66034015 66034015 1 + G A COAD 66034001 + 66033981 66034021 41 TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGCGTGCTGC TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGCATGCTGC < 41bp 1 0.696992042699982 1 0.734932541847229 experiment 0.606015914600035 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC2 ENSG00000174996 CDS Human protein_coding chr11:66034001 chr11:66034015 synonymous SNV . 0 35 hm5C_associated_SNPs_20838 0 0 1 PRPF8 POSTAR2 ENCODE chr11:66033943-66034025
64251 chr19 13930222 13930222 1 + T C COAD 13930238 + 13930218 13930258 41 CCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT CCCACGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT < 41bp 1 0.133125980932731 1 0.0529041588306427 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13930238 chr19:13930222 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_20841 0 0 1 DDX24 POSTAR2 ENCODE chr19:13930170-13930227
64251 chr19 48832635 48832635 1 + A G COAD 48832653 + 48832633 48832673 41 TCATGGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTCATC TCGTGGTGCTCTCCCTCATTCTCTGCTGTCTCTCCTTCATC < 41bp 1 0.5051507559903 1 0.0742425620555878 experiment 0.9896984880194 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832653 chr19:48832635 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_20843 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48832620-48832640
64251 chr1 154215749 154215749 1 + G A COAD 154215745 + 154215725 154215765 41 TGTGTCTTCAGTGCCTCTGCCTGCGGAGAATGTGACAATCA TGTGTCTTCAGTGCCTCTGCCTGCAGAGAATGTGACAATCA < 41bp 1 0.760837840684373 1 0.767014622688293 experiment 0.478324318631253 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154215745 chr1:154215749 synonymous SNV . 0 25 hm5C_associated_SNPs_20844 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154215702-154215758
64251 chr10 12162803 12162803 1 + G A COAD 12162801 + 12162781 12162821 41 TATAGCTCCGTCTGGTGGGCCGGCCCCCTTTGCCAGTACCC TATAGCTCCGTCTGGTGGGCCGACCCCCTTTGCCAGTACCC < 41bp 1 0.09991564698927 1 0.667125582695007 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12162801 chr10:12162803 synonymous SNV . 0 23 hm5C_associated_SNPs_20845 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:12162792-12162807
64251 chr14 56079169 56079169 1 + G A COAD 56079153 + 56079133 56079173 41 CCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATC CCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACACATC < 41bp 1 0.570746286176644 1 0.0748054385185242 experiment 0.858507427646712 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56079153 chr14:56079169 nonsynonymous SNV 0.291 1 37 hm5C_associated_SNPs_20846 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr14:56079160-56079180
64251 chr6 30692127 30692127 1 + G A COAD 30692122 + 30692102 30692142 41 GTATCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGG GTATCAGCAGTACCAGGATGCCACCACAGAAGAGGAGGAGG < 41bp 1 0.0786987528985895 1 0.481084316968918 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692122 chr6:30692127 nonsynonymous SNV 0.936 1 26 hm5C_associated_SNPs_20848 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr6 30692127 30692127 1 + G A COAD 30692125 + 30692105 30692145 41 TCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATT TCAGCAGTACCAGGATGCCACCACAGAAGAGGAGGAGGATT < 41bp 1 0.374880860484593 1 0.0850978195667267 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692125 chr6:30692127 nonsynonymous SNV 0.936 1 23 hm5C_associated_SNPs_20849 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr6 30692127 30692127 1 + G A COAD 30692126 + 30692106 30692146 41 CAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTT CAGCAGTACCAGGATGCCACCACAGAAGAGGAGGAGGATTT < 41bp 1 0.360133994082796 1 0.410218894481659 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692126 chr6:30692127 nonsynonymous SNV 0.936 1 22 hm5C_associated_SNPs_20850 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr6 30692127 30692127 1 + G A COAD 30692147 + 30692127 30692167 41 GCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGA ACAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGA < 41bp 1 0.641159441418781 1 0.707365274429321 experiment 0.717681117162438 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692147 chr6:30692127 nonsynonymous SNV 0.936 1 1 hm5C_associated_SNPs_20851 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr1 200776561 200776561 1 + A G COAD 200776560 + 200776540 200776580 41 GCTTATACTGTAGAAATGGTCAGTATAGAAAAAGTAATTGC GCTTATACTGTAGAAATGGTCGGTATAGAAAAAGTAATTGC < 41bp 1 0.626754729006786 1 0.275854051113129 experiment 0.746490541986428 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200776560 chr1:200776561 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_20856 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200776533-200776578
64251 chr21 46931094 46931094 1 + C T COAD 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCGGGGCATGCATCTTCTCCTTTGACGGCAAGGACGTCC < 41bp 1 0.0570109599313957 1 0.136313140392303 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931094 nonsynonymous SNV 0.451 4 11 hm5C_associated_SNPs_20857 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr21 46931094 46931094 1 + C T COAD 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCGGGGCATGCATCTTCTCCTTTGACGGCAAGGACGTCCT < 41bp 1 0.0718554087788708 1 0.0528660118579865 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931094 nonsynonymous SNV 0.451 4 10 hm5C_associated_SNPs_20858 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr18 13056495 13056495 1 + G T COAD 13056496 + 13056476 13056516 41 ATCCAGCTGTTGCAGGAGAGCCTGTGCAGAACTCTGTGGCT ATCCAGCTGTTGCAGGAGATCCTGTGCAGAACTCTGTGGCT < 41bp 1 0.189874812407931 1 0.429507553577423 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056496 chr18:13056495 nonsynonymous SNV 0.656 0 20 hm5C_associated_SNPs_20859 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:13056467-13056499
64251 chr19 32973074 32973074 1 + C T COAD 32973083 + 32973063 32973103 41 AACCTGCCTCCCTACGTGGCCTACTTCACCAGAGTGTTCCA AACCTGCCTCCTTACGTGGCCTACTTCACCAGAGTGTTCCA < 41bp 1 0.187783901293585 1 0.138640701770782 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32973083 chr19:32973074 synonymous SNV . 0 12 hm5C_associated_SNPs_20860 0 0 1 RBM15 POSTAR2 ENCODE chr19:32973073-32973215
64251 chr7 45688317 45688317 1 + G A COAD 45688321 + 45688301 45688341 41 GGACTGCTACTACTGCGTGTCGGGCCTCACCCAGCCCAAGA GGACTGCTACTACTGCATGTCGGGCCTCACCCAGCCCAAGA < 41bp 1 0.505019283456155 1 0.785029768943787 experiment 0.98996143308769 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45688321 chr7:45688317 nonsynonymous SNV 0.625 5 17 hm5C_associated_SNPs_20861 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:45688292-45688319
64251 chr14 64596886 64596886 1 + G T COAD 64596874 + 64596854 64596894 41 TGTTGCAAGGCATGGTGGAACTGGTGAAGATTGGGAAGGAA TGTTGCAAGGCATGGTGGAACTGGTGAAGATTTGGAAGGAA < 41bp 1 0.259581581517001 1 0.352611154317856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64596874 chr14:64596886 nonsynonymous SNV 0.912 4 33 hm5C_associated_SNPs_20864 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64596867-64596905
64251 chr16 30773899 30773899 1 + C T COAD 30773908 + 30773888 30773928 41 CGCGCCGCCGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAA CGCGCCGCCGGTGACGGGGGCTCAGGGCCCCCGGAAAAGAA < 41bp 1 0.347585894933465 1 0.450242012739182 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773908 chr16:30773899 synonymous SNV . 0 12 hm5C_associated_SNPs_20865 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:30773880-30773900
64251 chr16 30773899 30773899 1 + C T COAD 30773915 + 30773895 30773935 41 CCGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGT CCGGTGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGT < 41bp 1 0.107070019014939 1 0.299264460802078 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773915 chr16:30773899 synonymous SNV . 0 5 hm5C_associated_SNPs_20866 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:30773880-30773900
64251 chr16 30773899 30773899 1 + C T COAD 30773916 + 30773896 30773936 41 CGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTC CGGTGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTC < 41bp 1 0.356197985339558 1 0.479425042867661 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773916 chr16:30773899 synonymous SNV . 0 4 hm5C_associated_SNPs_20867 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:30773880-30773900
64251 chr16 30773899 30773899 1 + C T COAD 30773917 + 30773897 30773937 41 GGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCG GGTGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCG < 41bp 1 0.601164452751593 1 0.736515164375305 experiment 0.797671094496814 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773917 chr16:30773899 synonymous SNV . 0 3 hm5C_associated_SNPs_20868 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:30773880-30773900
64251 chr16 30773899 30773899 1 + C T COAD 30773918 + 30773898 30773938 41 GCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCGT GTGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCGT < 41bp 1 0.645449042893932 1 0.666687071323395 experiment 0.709101914212135 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773918 chr16:30773899 synonymous SNV . 0 2 hm5C_associated_SNPs_20869 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:30773880-30773900
64251 chr1 109803855 109803855 1 + C T COAD 109803866 + 109803846 109803886 41 CGCGGCCTGCGCCAGCGTTTCCACTTCACCCTGGCCCTCTC CGCGGCCTGTGCCAGCGTTTCCACTTCACCCTGGCCCTCTC < 41bp 1 0.150991289460705 1 0.219131022691727 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109803866 chr1:109803855 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_20870 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109803836-109803860
64251 chr16 2489444 2489444 1 + G A COAD 2489428 + 2489408 2489448 41 GGATGTCTGACCAGCTCCTACCTCCTCTGGGAAAGCGACAG GGATGTCTGACCAGCTCCTACCTCCTCTGGGAAAGCAACAG < 41bp 1 0.0255866082456101 1 0.0690689086914062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNF ENSG00000162063 CDS Human protein_coding chr16:2489428 chr16:2489444 nonsynonymous SNV 0.787 0 37 hm5C_associated_SNPs_20871 0 0 3 DDX24 POSTAR2 ENCODE chr16:2489342-2489447
64251 chr13 76395516 76395516 1 + G A COAD 76395515 + 76395495 76395535 41 CTTTTGCAAAAAGAGAGGACCGTGTAACAACTGAAATTCAG CTTTTGCAAAAAGAGAGGACCATGTAACAACTGAAATTCAG < 41bp 1 0.116898592938344 1 0.100028604269028 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76395515 chr13:76395516 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_20873 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:76395500-76395520
64251 chr17 78078778 78078778 1 + C T COAD 78078760 + 78078740 78078780 41 GGAGCCCAGATGGGGCAGCCCTGGTGCTTCTTCCCACCCAG GGAGCCCAGATGGGGCAGCCCTGGTGCTTCTTCCCACCTAG < 41bp 1 0.719033076699116 1 0.430971086025238 experiment 0.561933846601768 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078760 chr17:78078778 synonymous SNV . 0 39 hm5C_associated_SNPs_20874 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:78078748-78078780
64251 chr17 80426678 80426678 1 + T G COAD 80426677 + 80426657 80426697 41 GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC GCACAAAGTGCTGGTAGTGTCGGTGTGTCCTCAATCTTTGC < 41bp 1 0.58009520039915 1 0.898734629154205 experiment 0.8398095992017 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NARF ENSG00000141562 CDS Human protein_coding chr17:80426677 chr17:80426678 synonymous SNV . 0 22 hm5C_associated_SNPs_20875 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80426641-80426696
64251 chr14 21542359 21542359 1 + G A COAD 21542358 + 21542338 21542378 41 TACAAGGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT TACAAGGCATCAACAAGGACCAGCCAACAGGTCGCCTCAGT < 41bp 1 0.150670216039587 1 0.29567676782608 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21542358 chr14:21542359 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_20876 0 0 1 EIF3H POSTAR2 ENCODE chr14:21542296-21542371
64251 chr16 85698705 85698705 1 + C T COAD 85698720 + 85698700 85698740 41 CTCTCCGAGGGACAGTCCTGCCGTCTCCCTGAGTGGTAAGG CTCTCTGAGGGACAGTCCTGCCGTCTCCCTGAGTGGTAAGG < 41bp 1 0.0251465558898153 1 0.0853056609630585 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85698720 chr16:85698705 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_20878 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:85698685-85698712
64251 chr16 85698705 85698705 1 + C T COAD 85698721 + 85698701 85698741 41 TCTCCGAGGGACAGTCCTGCCGTCTCCCTGAGTGGTAAGGG TCTCTGAGGGACAGTCCTGCCGTCTCCCTGAGTGGTAAGGG < 41bp 1 0.134936028589066 1 0.124894857406616 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85698721 chr16:85698705 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_20879 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:85698685-85698712
64251 chr9 140003011 140003011 1 + G A COAD 140002991 + 140002971 140003011 41 AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAG AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAA < 41bp 1 0.048602517084552 1 0.1656733751297 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002991 chr9:140003011 nonsynonymous SNV 0.915 4 41 hm5C_associated_SNPs_20880 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140003011 140003011 1 + G A COAD 140002992 + 140002972 140003012 41 AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAGC AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAAC < 41bp 1 0.513080172453862 1 0.146573960781097 experiment 0.973839655092276 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002992 chr9:140003011 nonsynonymous SNV 0.915 4 40 hm5C_associated_SNPs_20881 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr16 29912744 29912744 1 + G A COAD 29912748 + 29912728 29912768 41 GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG GTGAGCCGGCGGCTTCAGGCCTACGCAAGGCGCTACTCCTG < 41bp 1 0.677940620438857 1 0.472908407449722 experiment 0.644118759122286 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912748 chr16:29912744 nonsynonymous SNV 0.987 0 17 hm5C_associated_SNPs_20882 0 0 2 GRSF1 POSTAR2 ENCODE chr16:29912608-29912745
64251 chr12 118462787 118462787 1 + C T COAD 118462801 + 118462781 118462821 41 GTTCCCCGCCTGGAACATGTCGTGGAAGAAGAGAAGTGAGT GTTCCCTGCCTGGAACATGTCGTGGAAGAAGAGAAGTGAGT < 41bp 1 0.70066437277428 1 0.349407494068146 experiment 0.59867125445144 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RFC5 ENSG00000111445 CDS Human protein_coding chr12:118462801 chr12:118462787 nonsynonymous SNV 0.986 3 7 hm5C_associated_SNPs_20883 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:118462711-118462796
64251 chr6 117869581 117869581 1 + G A COAD 117869589 + 117869569 117869609 41 CCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAAT CCTCAACCAGACAGCCATGACTGCCCTTTTGTGAACACAAT < 41bp 1 0.368737202446111 1 0.11996990442276 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869589 chr6:117869581 synonymous SNV . 0 13 hm5C_associated_SNPs_20884 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:117869538-117869598
64251 chr18 77474884 77474884 1 + A G COAD 77474881 + 77474861 77474901 41 GAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGA GAAGTCCTCCTCCTCCGCCTCTGGTGGCGAAAGCGAGGGGA < 41bp 1 0.644429524259726 1 0.631859004497528 experiment 0.711140951480548 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474881 chr18:77474884 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_20886 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr2 10560039 10560039 1 + C T COAD 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTATGCCAACTTCTTCCCCTACGGCGACGCTTCCAA < 41bp 1 0.106440968001085 1 0.147391140460968 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560039 synonymous SNV . 0 9 hm5C_associated_SNPs_20888 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10560014-10560052
64251 chr3 184104656 184104656 1 + G A COAD 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACGAACGGTGATCTGTGACCCAGTGGTGTGCCCACCGCCCA < 41bp 1 0.697117293826324 1 0.712969720363617 experiment 0.605765412347351 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104656 synonymous SNV . 0 22 hm5C_associated_SNPs_20889 0 0 3 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr17 47119661 47119661 1 + C T COAD 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATTGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA < 41bp 1 0.13582959114391 1 0.211308389902115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119661 synonymous SNV . 0 4 hm5C_associated_SNPs_20891 0 0 19 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr17 47119661 47119661 1 + C T COAD 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATTGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA < 41bp 1 0.378514612540593 1 0.231577962636948 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119661 synonymous SNV . 0 3 hm5C_associated_SNPs_20892 0 0 19 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr19 49611242 49611242 1 + C T COAD 49611229 + 49611209 49611249 41 AGGCGCTCCAGGGAGCGGAGCAAGGACAAGGACCGGGACCG AGGCGCTCCAGGGAGCGGAGCAAGGACAAGGACTGGGACCG < 41bp 1 0.716861319731164 1 0.795904278755188 experiment 0.566277360537673 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611229 chr19:49611242 nonsynonymous SNV 0.907 2 34 hm5C_associated_SNPs_20894 0 0 6 RPS3 POSTAR2 ENCODE chr19:49611201-49611256
64251 chr11 62656110 62656110 1 + G A COAD 62656090 + 62656070 62656110 41 CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACA < 41bp 1 0.285370616173175 1 0.327881932258606 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656090 chr11:62656110 nonsynonymous SNV 0.006 1 41 hm5C_associated_SNPs_20895 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62656102-62656130
64251 chr11 62656110 62656110 1 + G A COAD 62656092 + 62656072 62656112 41 GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACACC < 41bp 1 0.347410708661578 1 0.0246091187000275 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656092 chr11:62656110 nonsynonymous SNV 0.006 1 39 hm5C_associated_SNPs_20896 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62656102-62656130
64251 chr19 13264187 13264187 1 + G A COAD 13264196 + 13264176 13264216 41 TGTCGTTGCCGGCCGCCCTCCCCTCTGACCCTCGCCTGCAC TGTCGTTGCCGACCGCCCTCCCCTCTGACCCTCGCCTGCAC < 41bp 1 0.107680085677264 1 0.572973012924194 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient IER2 ENSG00000160888 CDS Human protein_coding chr19:13264196 chr19:13264187 nonsynonymous SNV 0.000 0 12 hm5C_associated_SNPs_20898 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:13264175-13264213
64251 chr17 67515570 67515570 1 + G T COAD 67515562 + 67515542 67515582 41 CTGTCACCTTTTATGGCGCACTGTTTCGGGAGGTAGGTGAC CTGTCACCTTTTATGGCGCACTGTTTCGTGAGGTAGGTGAC < 41bp 1 0.158599819002575 1 0.0423873662948608 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K6 ENSG00000108984 CDS Human protein_coding chr17:67515562 chr17:67515570 synonymous SNV . 0 29 hm5C_associated_SNPs_20900 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:67515544-67515573
64251 chr1 6505931 6505931 1 + C T COAD 6505928 + 6505908 6505948 41 GCCTCCTGTAGGACCACAGGCAGCTGACATCTACATGCAGA GCCTCCTGTAGGACCACAGGCAGTTGACATCTACATGCAGA < 41bp 1 0.170776019491227 1 0.457861661911011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESPN ENSG00000187017 CDS Human protein_coding chr1:6505928 chr1:6505931 nonsynonymous SNV 0.132 2 24 hm5C_associated_SNPs_20901 0 0 1 DDX24 POSTAR2 ENCODE chr1:6505890-6505952
64251 chr1 32620270 32620270 1 + G A COAD 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACAAAG < 41bp 1 0.209994352105163 1 0.105906367301941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620270 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_20902 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620270 32620270 1 + G A COAD 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACAAAGA < 41bp 1 0.251891752736365 1 0.352325081825256 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620270 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_20903 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr13 77661742 77661742 1 - G A COAD 77661728 - 77661708 77661748 41 TAATGTCATCCAAACCACTTCTCTCCATGATATTCTGTGGC TAATGTTATCCAAACCACTTCTCTCCATGATATTCTGTGGC < 41bp 1 0.0278919719452489 1 0.456948816776276 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MYCBP2 ENSG00000005810 CDS Human protein_coding chr13:77661728 chr13:77661742 synonymous SNV . 0 7 hm5C_associated_SNPs_20904 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:77661711-77661743
64251 chr2 232035370 232035370 1 + G A COAD 232035362 + 232035342 232035382 41 ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAAC ACCTGTGGCAGCACATGGCCCAAAAATCAAGGAGGAGGAAC < 41bp 1 0.619843229918959 1 0.0628629922866821 experiment 0.760313540162082 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232035362 chr2:232035370 nonsynonymous SNV 0.984 1 29 hm5C_associated_SNPs_20905 0 0 3 GRWD1 POSTAR2 ENCODE chr2:232035297-232035372
64251 chr15 29346719 29346719 1 + G A COAD 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCA < 41bp 1 0.73986866910375 1 0.314088582992554 experiment 0.5202626617925 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346719 nonsynonymous SNV 0.318 0 41 hm5C_associated_SNPs_20906 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346719 29346719 1 + G A COAD 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCACCT < 41bp 1 0.719155338322545 1 0.731620907783508 experiment 0.561689323354911 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346719 nonsynonymous SNV 0.318 0 38 hm5C_associated_SNPs_20907 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr10 122625220 122625220 1 + T C COAD 122625218 + 122625198 122625238 41 AACTTTACGTGTTCGAAGATCTTATAATAACATTTTTACCA AACTTTACGTGTTCGAAGATCTCATAATAACATTTTTACCA < 41bp 1 0.193188333269041 1 0.222042292356491 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122625218 chr10:122625220 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_20908 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:122625200-122625220
64251 chr10 122625220 122625220 1 + T C COAD 122625228 + 122625208 122625248 41 GTTCGAAGATCTTATAATAACATTTTTACCACTTCAAATGA GTTCGAAGATCTCATAATAACATTTTTACCACTTCAAATGA < 41bp 1 0.118889733247106 1 0.107596635818481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122625228 chr10:122625220 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_20909 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:122625200-122625220
64251 chr6 27101085 27101085 1 + A C COAD 27101066 + 27101046 27101086 41 CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCAT CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCCT < 41bp 1 0.796784126468835 1 0.534350275993347 experiment 0.40643174706233 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101066 chr6:27101085 nonsynonymous SNV 0.628 1 40 hm5C_associated_SNPs_20916 0 0 56 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr8 48962476 48962476 1 + C T COAD 48962459 + 48962439 48962479 41 CCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTC CCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTTCTC < 41bp 1 0.798103209558822 1 0.267650604248047 experiment 0.403793580882357 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2V2 ENSG00000169139 CDS Human protein_coding chr8:48962459 chr8:48962476 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_20917 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48962414-48962491
64251 chr4 5733335 5733335 1 + C T COAD 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCTGCACCTTCCTCCGGGTGAACGCCTTCCC < 41bp 1 0.0425861955183283 1 0.0902552306652069 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733335 nonsynonymous SNV 0.023 0 13 hm5C_associated_SNPs_20919 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr7 141341093 141341093 1 + A G COAD 141341103 + 141341083 141341123 41 CACGGGACCTACAGAGAGACCTCCCAATGAACCAGAGGAGA CACGGGACCTGCAGAGAGACCTCCCAATGAACCAGAGGAGA < 41bp 1 0.339476234966565 1 0.134291917085648 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141341103 chr7:141341093 nonsynonymous SNV 0.996 0 11 hm5C_associated_SNPs_20922 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141341069-141341096
64251 chr8 17419501 17419501 1 + C T COAD 17419497 + 17419477 17419517 41 TCTTGACCACTTACGGAGTTCATGCCATCACCAGGCTGGAG TCTTGACCACTTACGGAGTTCATGTCATCACCAGGCTGGAG < 41bp 1 0.314957959174109 1 0.0810132026672363 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17419497 chr8:17419501 nonsynonymous SNV 0.014 1 25 hm5C_associated_SNPs_20923 0 0 1 RPS3 POSTAR2 ENCODE chr8:17419451-17419544
64251 chr1 233489657 233489657 1 + C T COAD 233489675 + 233489655 233489695 41 GCCCATTCCATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA GCTCATTCCATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA < 41bp 1 0.375152767062372 1 0.133218854665756 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233489675 chr1:233489657 nonsynonymous SNV 0.785 5 3 hm5C_associated_SNPs_20928 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr1:233489636-233489658
64251 chr15 69718690 69718690 1 + G A COAD 69718677 + 69718657 69718697 41 ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGACGTATTGCT ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGACATATTGCT < 41bp 1 0.516184320989485 1 0.544972121715546 experiment 0.96763135802103 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69718677 chr15:69718690 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_20929 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:69718665-69718690
64251 chr5 137735620 137735620 1 + A G COAD 137735614 + 137735594 137735634 41 GTGATGTGTGTGAAACAACTCTCTTCAACATCCACTGGGTT GTGATGTGTGTGAAACAACTCTCTTCGACATCCACTGGGTT < 41bp 1 0.130096418497052 1 0.0544739067554474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137735614 chr5:137735620 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_20931 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr5:137735581-137735630
64251 chr11 130013309 130013309 1 + C A COAD 130013308 + 130013288 130013328 41 AGAACCATGGCTATGAGAACCCCACCTACAAATACCTGGAG AGAACCATGGCTATGAGAACCACACCTACAAATACCTGGAG < 41bp 1 0.30230367946996 1 0.561814904212952 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130013308 chr11:130013309 nonsynonymous SNV 0.980 5 22 hm5C_associated_SNPs_20932 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:130013255-130013323
64251 chr6 158497751 158497751 1 + C T COAD 158497757 + 158497737 158497777 41 CAAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTG CAAGCGACAAATGCTGCACCCCCGCCTGGACAGACAGGGTG < 41bp 1 0.167018302379776 1 0.107027411460876 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497757 chr6:158497751 nonsynonymous SNV 0.948 4 15 hm5C_associated_SNPs_20933 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr6 158497751 158497751 1 + C T COAD 158497758 + 158497738 158497778 41 AAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTGC AAGCGACAAATGCTGCACCCCCGCCTGGACAGACAGGGTGC < 41bp 1 0.128821677701193 1 0.157418459653854 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497758 chr6:158497751 nonsynonymous SNV 0.948 4 14 hm5C_associated_SNPs_20934 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr12 53685788 53685788 1 + G T COAD 53685807 + 53685787 53685827 41 GGGAAAGCATGCCCAGCCTCCAAGCACTGCCTGTCACCCGG GTGAAAGCATGCCCAGCCTCCAAGCACTGCCTGTCACCCGG < 41bp 1 0.320888568687586 1 0.345775902271271 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53685807 chr12:53685788 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_20935 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53685765-53685791
64251 chr12 94072723 94072723 1 + T C COAD 94072703 + 94072683 94072723 41 AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCC < 41bp 1 0.68386139082847 1 0.612066388130188 experiment 0.632277218343061 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072703 chr12:94072723 nonsynonymous SNV 0.981 4 41 hm5C_associated_SNPs_20936 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072720-94072740
64251 chr11 33358677 33358677 1 + T C COAD 33358660 + 33358640 33358680 41 CTCAAGGTTTGCCAGGAGAACAGTTGTTAAATGTGGGTACT CTCAAGGTTTGCCAGGAGAACAGTTGTTAAATGTGGGCACT < 41bp 1 0.229046695348191 1 0.124679148197174 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33358660 chr11:33358677 synonymous SNV . 0 38 hm5C_associated_SNPs_20937 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:33358665-33358691
64251 chr7 55259434 55259434 1 + G A COAD 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCATCGCTTGGTGCACCGCGA < 41bp 1 0.0474997313550034 1 0.262443482875824 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259434 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_20938 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr6 157527994 157527994 1 + A G COAD 157528014 + 157527994 157528034 41 ATCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGA GTCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGA < 41bp 1 0.328970996257585 1 0.123365700244904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528014 chr6:157527994 nonsynonymous SNV 0.462 1 1 hm5C_associated_SNPs_20939 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:157527980-157528000
64251 chr1 27088697 27088697 1 + C A COAD 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTAAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA < 41bp 1 0.221878236706639 1 0.077915221452713 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088697 stopgain 0.990 1 4 hm5C_associated_SNPs_20940 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:27088679-27088700
64251 chr2 101622468 101622468 1 + A T COAD 101622449 + 101622429 101622469 41 CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAG CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGTG < 41bp 1 0.190103988494571 1 0.400793313980103 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622449 chr2:101622468 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_20941 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101622418-101622470
64251 chr2 101622468 101622468 1 + A T COAD 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGTGGATG < 41bp 1 0.73170515167981 1 0.698485136032104 experiment 0.536589696640381 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622468 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_20942 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101622418-101622470
64251 chr2 101622468 101622468 1 + A T COAD 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATGTGGATGAAGATTCA < 41bp 1 0.711292413045651 1 0.455773085355759 experiment 0.577415173908698 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622468 nonsynonymous SNV 0.999 2 28 hm5C_associated_SNPs_20943 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101622418-101622470
64251 chr19 48179165 48179165 1 + G A COAD 48179146 + 48179126 48179166 41 CTGGATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAAGG CTGGATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAAAG < 41bp 1 0.155945184876516 1 0.614430606365204 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BICRA ENSG00000063169 CDS Human protein_coding chr19:48179146 chr19:48179165 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_20944 0 0 1 PRPF8 POSTAR2 ENCODE chr19:48179155-48179215
64251 chr6 161519332 161519332 1 + G A COAD 161519314 + 161519294 161519334 41 TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACGCG TTTCTTCTTGTCTTAGCACTCGGAGCATGCCTTCCGACACG < 41bp 1 0.706716009039153 1 0.960439682006836 experiment 0.586567981921694 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519314 chr6:161519332 nonsynonymous SNV 0.022 0 39 hm5C_associated_SNPs_20945 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:161519307-161519340
64251 chr1 220964945 220964945 1 + T G COAD 220964927 + 220964907 220964947 41 TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCTAC TGACCTGCGATGGTGACACCCTGACTCTCAGTGCAGCCGAC < 41bp 1 0.429095936255199 1 0.145555824041367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964927 chr1:220964945 nonsynonymous SNV 0.998 0 39 hm5C_associated_SNPs_20946 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:220964942-220964961
64251 chr1 220964945 220964945 1 + T G COAD 220964933 + 220964913 220964953 41 GCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACAAAG GCGATGGTGACACCCTGACTCTCAGTGCAGCCGACACAAAG < 41bp 1 0.700351592115221 1 0.501465260982513 experiment 0.599296815769559 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964933 chr1:220964945 nonsynonymous SNV 0.998 0 33 hm5C_associated_SNPs_20947 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:220964942-220964961
64251 chr10 102762413 102762413 1 + G A COAD 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCCAGGGGGCCAGCTCCTCCCCGCCACCACG < 41bp 1 0.271521934665618 1 0.366937577724457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762413 nonsynonymous SNV 0.757 0 14 hm5C_associated_SNPs_20949 0 0 5 DDX24 POSTAR2 ENCODE chr10:102762228-102762472
64251 chr19 7589943 7589943 1 + G A COAD 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CACCCCCAGAAGAGGAAGACCTTCGCCATCGTCTCAAATAC < 41bp 1 0.310369215405765 1 0.181242257356644 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589943 nonsynonymous SNV 0.985 4 28 hm5C_associated_SNPs_20950 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7589933-7589965
64251 chr9 131455957 131455957 1 + G A COAD 131455942 + 131455922 131455962 41 GACGAAACGTTCGAGTCAAACGCAGAATAAAGCCAGCAGGA GACGAAACGTTCGAGTCAAACGCAGAATAAAGCCAACAGGA < 41bp 1 0.784574856525354 1 0.618277788162231 experiment 0.430850286949293 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455942 chr9:131455957 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_20952 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr1 54670693 54670693 1 + G A COAD 54670699 + 54670679 54670719 41 ATTACCTCAAAGGTGTAAAGCAGGCCCTCTGGCTCACCAAG ATTACCTCAAAGGTATAAAGCAGGCCCTCTGGCTCACCAAG < 41bp 1 0.374881088521347 1 0.649189710617065 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670699 chr1:54670693 nonsynonymous SNV 0.912 1 15 hm5C_associated_SNPs_20956 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:54670692-54670693
64251 chr12 31244686 31244686 1 + G A COAD 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTGCATACGGCCACTCGGCAGGCCGCGG < 41bp 1 0.605957015455605 1 0.275212496519089 experiment 0.788085969088789 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244686 nonsynonymous SNV 0.290 0 20 hm5C_associated_SNPs_20957 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr12 31244686 31244686 1 + G A COAD 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATACGGCCACTCGGCAGGCCGCGGGCAT < 41bp 1 0.226120456403945 1 0.033778965473175 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244686 nonsynonymous SNV 0.290 0 16 hm5C_associated_SNPs_20958 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr19 56190108 56190108 1 + C A COAD 56190096 + 56190076 56190116 41 CGAGCAATGACCCCTGGGGCCCATCCAGCTCCCTCATGTCA CGAGCAATGACCCCTGGGGCCCATCCAGCTCCATCATGTCA < 41bp 1 0.0217408783804111 1 0.0107534825801849 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EPN1 ENSG00000063245 CDS Human protein_coding chr19:56190096 chr19:56190108 nonsynonymous SNV 0.997 3 33 hm5C_associated_SNPs_20959 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:56190079-56190113
64251 chr3 126724993 126724993 1 + G A COAD 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTCATCTTCTACAACTGCAGCGTCCACCAGTC < 41bp 1 0.208777985344973 1 0.216783136129379 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126724993 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_20960 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:126724978-126725006
64251 chr15 42105244 42105244 1 + G T COAD 42105224 + 42105204 42105244 41 GGAAAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGG GGAAAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGT < 41bp 1 0.265526269008802 1 0.0420383512973785 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42105224 chr15:42105244 nonsynonymous SNV 0.937 4 41 hm5C_associated_SNPs_20962 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:42105229-42105257
64251 chr15 29346576 29346576 1 + C T COAD 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGTCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC < 41bp 1 0.739312333106741 1 0.906378984451294 experiment 0.521375333786518 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346576 synonymous SNV . 0 7 hm5C_associated_SNPs_20964 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr19 58906065 58906065 1 + A G COAD 58906069 + 58906049 58906089 41 GGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGACGAGCT GGCTCCTCGAACTCCTGTGCCATTAAGAAGAAGGACGAGCT < 41bp 1 0.194632415575259 1 0.0768926441669464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906069 chr19:58906065 nonsynonymous SNV 0.999 4 17 hm5C_associated_SNPs_20965 0 0 42 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr22 29695767 29695767 1 + G T COAD 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGTGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG < 41bp 1 0.385495724449795 1 0.214234828948975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695767 synonymous SNV . 0 7 hm5C_associated_SNPs_20966 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr14 102466429 102466429 1 + C T COAD 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGTGCTGG < 41bp 1 0.184433382319026 1 0.595104157924652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466429 nonsynonymous SNV 0.950 4 36 hm5C_associated_SNPs_20967 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466392-102466437
64251 chr7 92020506 92020506 1 + C T COAD 92020521 + 92020501 92020541 41 GAAGACCTTGCCCAGAAAGTCAATAGGCCTTACCTTCGCAC GAAGATCTTGCCCAGAAAGTCAATAGGCCTTACCTTCGCAC < 41bp 1 0.5618375867715 1 0.164506286382675 experiment 0.876324826457001 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92020521 chr7:92020506 synonymous SNV . 0 6 hm5C_associated_SNPs_20968 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:92020487-92020525
64251 chr1 44071227 44071227 1 + T C COAD 44071222 + 44071202 44071242 41 GGTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGG GGTTCTACATTGTTGTGGTGCCCATCGACCGTGTGGGCGGG < 41bp 1 0.0648904351408582 1 0.0541650354862213 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071222 chr1:44071227 synonymous SNV . 0 26 hm5C_associated_SNPs_20969 0 0 2 SF3A3 POSTAR2 ENCODE chr1:44071176-44071234
64251 chr1 44071227 44071227 1 + T C COAD 44071223 + 44071203 44071243 41 GTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGGA GTTCTACATTGTTGTGGTGCCCATCGACCGTGTGGGCGGGA < 41bp 1 0.0346422777713279 1 0.137199401855469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071223 chr1:44071227 synonymous SNV . 0 25 hm5C_associated_SNPs_20970 0 0 2 SF3A3 POSTAR2 ENCODE chr1:44071176-44071234
64251 chrX 48457784 48457784 1 + G A COAD 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCATCGTTCTG < 41bp 1 0.313060258676583 1 0.0420770347118378 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457784 nonsynonymous SNV 0.994 3 33 hm5C_associated_SNPs_20972 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457784 48457784 1 + G A COAD 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGGGCCCGTGGGCACCATCGTTCTGT < 41bp 1 0.289485772648582 1 0.211584538221359 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457784 nonsynonymous SNV 0.994 3 32 hm5C_associated_SNPs_20973 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457784 48457784 1 + G A COAD 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGGGCCCGTGGGCACCATCGTTCTGTC < 41bp 1 0.727067256313557 1 0.398830473423004 experiment 0.545865487372885 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457784 nonsynonymous SNV 0.994 3 31 hm5C_associated_SNPs_20974 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chr19 13248341 13248341 1 + G A COAD 13248325 + 13248305 13248345 41 AACAGCTGCGGCACCGGCATCCGCTCTTCTACCAACGATCC AACAGCTGCGGCACCGGCATCCGCTCTTCTACCAACAATCC < 41bp 1 0.12969266303324 1 0.0815125107765198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NACC1 ENSG00000160877 CDS Human protein_coding chr19:13248325 chr19:13248341 nonsynonymous SNV 0.424 2 37 hm5C_associated_SNPs_20975 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13248337-13248364
64251 chr3 9976245 9976245 1 + T C COAD 9976249 + 9976229 9976269 41 AGTCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGC AGTCTTCTCCCCCGCCCCAGCCCCATCCGTGTCATACCTGC < 41bp 1 0.474472728265417 1 0.165260553359985 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976249 chr3:9976245 synonymous SNV . 0 17 hm5C_associated_SNPs_20976 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976245 9976245 1 + T C COAD 9976251 + 9976231 9976271 41 TCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCG TCTTCTCCCCCGCCCCAGCCCCATCCGTGTCATACCTGCCG < 41bp 1 0.0357540018579389 1 0.0380202531814575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976251 chr3:9976245 synonymous SNV . 0 15 hm5C_associated_SNPs_20977 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976245 9976245 1 + T C COAD 9976252 + 9976232 9976272 41 CTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCGG CTTCTCCCCCGCCCCAGCCCCATCCGTGTCATACCTGCCGG < 41bp 1 0.199397220176887 1 0.230963051319122 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976252 chr3:9976245 synonymous SNV . 0 14 hm5C_associated_SNPs_20978 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr18 29116355 29116355 1 + T C COAD 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGTCATTGACAAACCACCCGGCATGGCAGAAAAA < 41bp 1 0.0882102832614394 1 0.0896272957324982 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116355 synonymous SNV . 0 26 hm5C_associated_SNPs_20980 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr18 29116355 29116355 1 + T C COAD 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGTCATTGACAAACCACCCGGCATGGCAGAAAAATGGA < 41bp 1 0.2161685631634 1 0.193851143121719 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116355 synonymous SNV . 0 22 hm5C_associated_SNPs_20981 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr18 29116355 29116355 1 + T C COAD 29116363 + 29116343 29116383 41 TGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCAC TGACAAACCACCCGGCATGGCAGAAAAATGGAAAATAGCAC < 41bp 1 0.571061937592053 1 0.359875530004501 experiment 0.857876124815894 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116363 chr18:29116355 synonymous SNV . 0 13 hm5C_associated_SNPs_20982 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr3 61975335 61975335 1 + T C COAD 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGCCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC < 41bp 1 0.184405834086623 1 0.19068843126297 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975335 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_20984 0 0 1 DDX3X POSTAR2 ENCODE chr3:61975310-61975377
64251 chr6 33179725 33179725 1 + C T COAD 33179728 + 33179708 33179748 41 TTGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACACCAT TTGCCCAGCCTGGAGGGTGTCAGTGAAAAGCAGTACACCAT < 41bp 1 0.64974866503201 1 0.166161507368088 experiment 0.70050266993598 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RING1 ENSG00000204227 CDS Human protein_coding chr6:33179728 chr6:33179725 synonymous SNV . 0 18 hm5C_associated_SNPs_20985 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33179720-33179740
64251 chr7 127342544 127342544 1 + T C COAD 127342535 + 127342515 127342555 41 AGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT AGTGTGGTCAGGGCCCTGCTCCTCCCAGACTACTACCTGGT < 41bp 1 0.0511992407896513 1 0.0559619963169098 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127342535 chr7:127342544 synonymous SNV . 0 30 hm5C_associated_SNPs_20986 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:127342542-127342577
64251 chrX 107807151 107807151 1 + A T COAD 107807137 + 107807117 107807157 41 TGATGGAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG TGATGGAATTCCAGGGCCACCAGGACCAAAAGGATTCAGAG < 41bp 1 0.55374043142621 1 0.694611430168152 experiment 0.89251913714758 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107807137 chrX:107807151 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_20987 0 0 4 BUD13 POSTAR2 ENCODE chrX:107807116-107807157
64251 chr10 95262965 95262965 1 + C A COAD 95262979 + 95262959 95262999 41 GAAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGG GAAGGCAAGATATAGTACTACCACATTGCTTGAACAGCTGG < 41bp 1 0.47416722902498 1 0.0793690383434296 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262979 chr10:95262965 synonymous SNV . 0 7 hm5C_associated_SNPs_20988 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:95262881-95262975
64251 chr10 95262965 95262965 1 + C A COAD 95262980 + 95262960 95263000 41 AAGGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGA AAGGCAAGATATAGTACTACCACATTGCTTGAACAGCTGGA < 41bp 1 0.394722621521926 1 0.101385235786438 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262980 chr10:95262965 synonymous SNV . 0 6 hm5C_associated_SNPs_20989 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:95262881-95262975
64251 chr10 95262965 95262965 1 + C A COAD 95262982 + 95262962 95263002 41 GGCCAGATATAGTACTACCACATTGCTTGAACAGCTGGAAG GGCAAGATATAGTACTACCACATTGCTTGAACAGCTGGAAG < 41bp 1 0.271081084345031 1 0.168268829584122 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP55 ENSG00000138180 CDS Human protein_coding chr10:95262982 chr10:95262965 synonymous SNV . 0 4 hm5C_associated_SNPs_20990 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:95262881-95262975
64251 chr2 27595509 27595509 1 + C T COAD 27595510 + 27595490 27595530 41 CTTCGGAAGGAGTATGGGGCCAATGTGCTTCCTGCATTCCC CTTCGGAAGGAGTATGGGGTCAATGTGCTTCCTGCATTCCC < 41bp 1 0.452536632454035 1 0.222383409738541 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNX17 ENSG00000115234 CDS Human protein_coding chr2:27595510 chr2:27595509 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_20992 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:27595501-27595537
64251 chr1 242052807 242052807 1 + C A COAD 242052812 + 242052792 242052832 41 AAGAAACCCCTGTCCCCAGTCAGAGATAACATCCAACTAAC AAGAAACCCCTGTCCACAGTCAGAGATAACATCCAACTAAC < 41bp 1 0.699337484353487 1 0.935187518596649 experiment 0.601325031293025 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242052812 chr1:242052807 nonsynonymous SNV 0.990 4 16 hm5C_associated_SNPs_20995 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:242052787-242052889
64251 chr1 16261103 16261103 1 + A G COAD 16261121 + 16261101 16261141 41 CCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA CCGTGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA < 41bp 1 0.16951937926021 1 0.189920455217361 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261121 chr1:16261103 nonsynonymous SNV 0.431 0 3 hm5C_associated_SNPs_20996 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16261048-16261117
64251 chr2 233681732 233681732 1 + G A COAD 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCGAGAGGAAGAAGAACTTGCCCAAAGGAAACAGGTA < 41bp 1 0.11247747401994 1 0.247568309307098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681732 nonsynonymous SNV 0.999 4 28 hm5C_associated_SNPs_20998 0 0 14 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681732 233681732 1 + G A COAD 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CGAGAGGAAGAAGAACTTGCCCAAAGGAAACAGGTATGTAT < 41bp 1 0.343309014480371 1 0.435908555984497 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681732 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_20999 0 0 14 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr10 13251099 13251099 1 + G A COAD 13251100 + 13251080 13251120 41 TTCTGTTTCAGTAACTGTGGCCTCTACAAATGGGAACGGGA TTCTGTTTCAGTAACTGTGACCTCTACAAATGGGAACGGGA < 41bp 1 0.0312095457369788 1 0.122495174407959 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM10 ENSG00000065328 CDS Human protein_coding chr10:13251100 chr10:13251099 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_21000 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:13251074-13251102
64251 chr10 13251099 13251099 1 + G A COAD 13251101 + 13251081 13251121 41 TCTGTTTCAGTAACTGTGGCCTCTACAAATGGGAACGGGAC TCTGTTTCAGTAACTGTGACCTCTACAAATGGGAACGGGAC < 41bp 1 0.315574805664326 1 0.750568389892578 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM10 ENSG00000065328 CDS Human protein_coding chr10:13251101 chr10:13251099 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_21001 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:13251074-13251102
64251 chr10 13251099 13251099 1 + G A COAD 13251116 + 13251096 13251136 41 GTGGCCTCTACAAATGGGAACGGGACGGAATGCTAAAGGTA GTGACCTCTACAAATGGGAACGGGACGGAATGCTAAAGGTA < 41bp 1 0.539905930861604 1 0.600476145744324 experiment 0.920188138276793 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM10 ENSG00000065328 CDS Human protein_coding chr10:13251116 chr10:13251099 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_21002 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:13251074-13251102
64251 chr8 56922493 56922493 1 + G A COAD 56922491 + 56922471 56922511 41 AACTAATGCCGACGTGATGACCGCCCTGTCCCAGGGCTACA AACTAATGCCGACGTGATGACCACCCTGTCCCAGGGCTACA < 41bp 1 0.152363927250803 1 0.019383430480957 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56922491 chr8:56922493 nonsynonymous SNV 0.979 2 23 hm5C_associated_SNPs_21003 0 0 3 FMR1 POSTAR2 ENCODE chr8:56922467-56922550
64251 chr5 92923702 92923702 1 + C T COAD 92923717 + 92923697 92923737 41 AACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT AACGGTCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT < 41bp 1 0.356195570970117 1 0.240815430879593 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923717 chr5:92923702 synonymous SNV . 0 6 hm5C_associated_SNPs_21004 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr5:92923700-92923720
64251 chr7 40102523 40102523 1 + G A COAD 40102521 + 40102501 40102541 41 CCAGCCATTGATGTATGGAGCTGTGGGTAAGATAGCCTTAT CCAGCCATTGATGTATGGAGCTATGGGTAAGATAGCCTTAT < 41bp 1 0.147725652673597 1 0.362623661756516 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102521 chr7:40102523 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_21005 0 0 1 GRWD1 POSTAR2 ENCODE chr7:40102454-40102523
64251 chr9 130164926 130164926 1 + C T COAD 130164924 + 130164904 130164944 41 ATGTGCTTCATGCCCGAGACCCCGCGCTTCCTGCTGACTCA ATGTGCTTCATGCCCGAGACCCTGCGCTTCCTGCTGACTCA < 41bp 1 0.117899085488609 1 0.0687520205974579 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A8 ENSG00000136856 CDS Human protein_coding chr9:130164924 chr9:130164926 nonsynonymous SNV 0.983 5 23 hm5C_associated_SNPs_21007 0 0 1 SND1 POSTAR2 ENCODE chr9:130164899-130164958
64251 chr12 122252101 122252101 1 + G A COAD 122252118 + 122252098 122252138 41 CATGGTGGTGACCCCAGGAGCGGCAGCCGTGGCAGCCCCTT CATAGTGGTGACCCCAGGAGCGGCAGCCGTGGCAGCCCCTT < 41bp 1 0.777858973564939 1 0.70367819070816 experiment 0.444282052870122 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122252118 chr12:122252101 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_21008 0 0 1 ZNF622 POSTAR2 ENCODE chr12:122252038-122252116
64251 chr6 15511627 15511627 1 + G A COAD 15511609 + 15511589 15511629 41 CCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTC CCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACATC < 41bp 1 0.191178771582869 1 0.327233552932739 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15511609 chr6:15511627 nonsynonymous SNV 0.996 1 39 hm5C_associated_SNPs_21009 0 0 5 EFTUD2 POSTAR2 ENCODE chr6:15511615-15511654
64251 chr19 40883710 40883710 1 + C T COAD 40883722 + 40883702 40883742 41 GTGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGC GTGGTCCCTGCGGATGAGGCCCAGGCTCGAATCCCATATGC < 41bp 1 0.481993169237879 1 0.356693178415298 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883722 chr19:40883710 synonymous SNV . 0 9 hm5C_associated_SNPs_21010 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:40883700-40883720
64251 chr19 40883710 40883710 1 + C T COAD 40883723 + 40883703 40883743 41 TGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGCC TGGTCCCTGCGGATGAGGCCCAGGCTCGAATCCCATATGCC < 41bp 1 0.370856387276075 1 0.450406938791275 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883723 chr19:40883710 synonymous SNV . 0 8 hm5C_associated_SNPs_21011 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:40883700-40883720
64251 chr19 13054434 13054434 1 + C T COAD 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGTGTAAC < 41bp 1 0.577656846599707 1 0.646363377571106 experiment 0.844686306800585 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054434 synonymous SNV . 0 36 hm5C_associated_SNPs_21012 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054434 13054434 1 + C T COAD 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGCAACGAGACGTGGGGTGTAACAAAGGTGA < 41bp 1 0.685814459330005 1 0.360713005065918 experiment 0.628371081339989 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054434 synonymous SNV . 0 28 hm5C_associated_SNPs_21013 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr12 112229168 112229168 1 + C T COAD 112229155 + 112229135 112229175 41 ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATT ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGTCGCCATT < 41bp 1 0.129495024665549 1 0.027579128742218 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229155 chr12:112229168 nonsynonymous SNV 0.169 2 34 hm5C_associated_SNPs_21014 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229168 112229168 1 + C T COAD 112229156 + 112229136 112229176 41 CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTG CATTGTGCCTGGATTTGGCCCCACGGCTGGGGTCGCCATTG < 41bp 1 0.298295215756612 1 0.0642690062522888 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229156 chr12:112229168 nonsynonymous SNV 0.169 2 33 hm5C_associated_SNPs_21015 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229168 112229168 1 + C T COAD 112229157 + 112229137 112229177 41 ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTGC ATTGTGCCTGGATTTGGCCCCACGGCTGGGGTCGCCATTGC < 41bp 1 0.77813883100856 1 0.432345032691956 experiment 0.443722337982881 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229157 chr12:112229168 nonsynonymous SNV 0.169 2 32 hm5C_associated_SNPs_21016 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229168 112229168 1 + C T COAD 112229169 + 112229149 112229189 41 TTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGA TTTGGCCCCACGGCTGGGGTCGCCATTGCCTCCCATGAGGA < 41bp 1 0.796953964723484 1 0.774539232254028 experiment 0.406092070553032 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229169 chr12:112229168 nonsynonymous SNV 0.169 2 20 hm5C_associated_SNPs_21017 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr2 74315075 74315075 1 + G A COAD 74315067 + 74315047 74315087 41 CTCATCCTGGCCTGGGAGGGCATTCCCCGTAGCCTCGGAGA CTCATCCTGGCCTGGGAGGGCATTCCCCATAGCCTCGGAGA < 41bp 1 0.0241474503354726 1 0.0900512039661407 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74315067 chr2:74315075 nonsynonymous SNV 0.997 1 29 hm5C_associated_SNPs_21019 0 0 2 YBX3 POSTAR2 ENCODE chr2:74315026-74315090
64251 chr17 4923886 4923886 1 + C T COAD 4923870 + 4923850 4923890 41 TGGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACCGCCC TGGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACTGCCC < 41bp 1 0.111662064466374 1 0.067194938659668 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4923870 chr17:4923886 nonsynonymous SNV 0.949 1 37 hm5C_associated_SNPs_21020 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr17:4923880-4923900
64251 chr16 57171187 57171187 1 + C T COAD 57171175 + 57171155 57171195 41 CCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG CCGGTTTGCGGCCCAGGCCACACAACAGCGGATGGCCACGG < 41bp 1 0.636298487921362 1 0.233324527740479 experiment 0.727403024157276 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171175 chr16:57171187 nonsynonymous SNV 0.749 0 33 hm5C_associated_SNPs_21021 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr17 4859401 4859401 1 + G A COAD 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGAT < 41bp 1 0.512370927814856 1 0.0810806453227997 experiment 0.975258144370288 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859401 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_21024 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859401 4859401 1 + G A COAD 4859385 + 4859365 4859405 41 GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGATCAA < 41bp 1 0.439739992267118 1 0.135647833347321 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859385 chr17:4859401 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_21025 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859401 4859401 1 + G A COAD 4859389 + 4859369 4859409 41 AGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAG AGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGATCAACCAG < 41bp 1 0.775876885208205 1 0.575413227081299 experiment 0.448246229583591 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859389 chr17:4859401 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_21026 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859401 4859401 1 + G A COAD 4859392 + 4859372 4859412 41 AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATC AGAAGGCCTGCAACTGTCTGCTGCTGAAGATCAACCAGATC < 41bp 1 0.416857295537955 1 0.202319979667664 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859392 chr17:4859401 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_21027 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859401 4859401 1 + G A COAD 4859403 + 4859383 4859423 41 AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC AACTGTCTGCTGCTGAAGATCAACCAGATCGGCTCGGTGAC < 41bp 1 0.487378685846739 1 0.338927328586578 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859403 chr17:4859401 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_21028 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr16 56792470 56792470 1 + G A COAD 56792462 + 56792442 56792482 41 TCACATAGGTCAGTTCTCCTCGGGTCTCGGGGACTTGACAT TCACATAGGTCAGTTCTCCTCGGGTCTCAGGGACTTGACAT < 41bp 1 0.767086105323765 1 0.922167897224426 experiment 0.46582778935247 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56792462 chr16:56792470 nonsynonymous SNV 0.918 1 29 hm5C_associated_SNPs_21029 0 0 2 DDX3X POSTAR2 ENCODE chr16:56792435-56792568
64251 chr9 131830103 131830103 1 + C T COAD 131830119 + 131830099 131830139 41 CCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG CCTGTGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG < 41bp 1 0.203628421906195 1 0.114457696676254 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830119 chr9:131830103 nonsynonymous SNV 0.988 4 5 hm5C_associated_SNPs_21030 0 0 6 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr9 131830103 131830103 1 + C T COAD 131830120 + 131830100 131830140 41 CTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGA CTGTGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGA < 41bp 1 0.390649495558351 1 0.221457451581955 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830120 chr9:131830103 nonsynonymous SNV 0.988 4 4 hm5C_associated_SNPs_21031 0 0 6 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr5 176083806 176083806 1 + G A COAD 176083814 + 176083794 176083834 41 TTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCCA TTCATGGGCATCACCCTCCTCCAGGTACCCTTGTGGCCCCA < 41bp 1 0.649080559064239 1 0.921611070632935 experiment 0.701838881871522 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176083814 chr5:176083806 nonsynonymous SNV 0.839 4 13 hm5C_associated_SNPs_21032 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176083755-176083817
64251 chr7 150761825 150761825 1 + T C COAD 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGCC < 41bp 1 0.561524691885148 1 0.50299471616745 experiment 0.876950616229704 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761825 nonsynonymous SNV 0.001 0 40 hm5C_associated_SNPs_21033 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150761819-150761848
64251 chr10 43289388 43289388 1 + C T COAD 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA TGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA < 41bp 1 0.120987324027558 1 0.0545578896999359 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289388 nonsynonymous SNV 0.503 1 1 hm5C_associated_SNPs_21034 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chr16 29993194 29993194 1 + G A COAD 29993182 + 29993162 29993202 41 CCCTCCTGTGACTTTCAGGTCTGAGTACTTCCGGAATTTTG CCCTCCTGTGACTTTCAGGTCTGAGTACTTCCAGAATTTTG < 41bp 1 0.311925939726053 1 0.25924351811409 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29993182 chr16:29993194 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_21035 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:29993180-29993200
64251 chr12 56863100 56863100 1 + C A COAD 56863112 + 56863092 56863132 41 GATCGTTCCTGGGTGTTCACCTATGCCCAGCGCAAGTGGTA GATCGTTCATGGGTGTTCACCTATGCCCAGCGCAAGTGGTA < 41bp 1 0.350172329570441 1 0.200330644845963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863112 chr12:56863100 synonymous SNV . 0 9 hm5C_associated_SNPs_21036 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:56863077-56863108
64251 chr7 4824629 4824629 1 + G A COAD 4824610 + 4824590 4824630 41 CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCAG < 41bp 1 0.180158061336505 1 0.217550188302994 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824610 chr7:4824629 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_21038 2 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr9 96026308 96026308 1 + C T COAD 96026292 + 96026272 96026312 41 TCGACTTGGACGGGGACGCACCCGATGAAATTGCCACGTAT TCGACTTGGACGGGGACGCACCCGATGAAATTGCCATGTAT < 41bp 1 0.435376478654015 1 0.468665450811386 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96026292 chr9:96026308 nonsynonymous SNV 0.129 4 37 hm5C_associated_SNPs_21040 0 0 3 PPIG POSTAR2 ENCODE chr9:96026269-96026308
64251 chr5 151183531 151183531 1 + G A COAD 151183550 + 151183530 151183570 41 CGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG CACCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG < 41bp 1 0.314315508520506 1 0.451910495758057 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151183550 chr5:151183531 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_21041 0 0 18 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:151183520-151183540
64251 chr11 252542 252542 1 + C T COAD 252522 + 252502 252542 41 CAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCAC CAGATCAAGGGAATGAAGGACCGCCTGGAGTTCTGGTGCAT < 41bp 1 0.157428248276569 1 0.216649830341339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:252522 chr11:252542 nonsynonymous SNV 0.730 2 41 hm5C_associated_SNPs_21042 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr11:252507-252573
64251 chr11 252542 252542 1 + C T COAD 252540 + 252520 252560 41 GACCGCCTGGAGTTCTGGTGCACGGATGTGAAGAGCATGGA GACCGCCTGGAGTTCTGGTGCATGGATGTGAAGAGCATGGA < 41bp 1 0.584686128768553 1 0.0806431174278259 experiment 0.830627742462894 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:252540 chr11:252542 nonsynonymous SNV 0.730 2 23 hm5C_associated_SNPs_21043 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr11:252507-252573
64251 chr16 56501908 56501908 1 + T A COAD 56501910 + 56501890 56501930 41 TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG TTGAAGAAAGTTCTGAAAATCTCCTGAAGGAGTTTCTTAAG < 41bp 1 0.608562684413246 1 0.906788408756256 experiment 0.782874631173508 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56501910 chr16:56501908 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_21050 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr16:56501906-56501926
64251 chr4 38117447 38117447 1 + G T COAD 38117444 + 38117424 38117464 41 ACCAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTAGCA ACCAGGAAGTGGGATATTGCCAATGTCTCAGCTTTGTAGCA < 41bp 1 0.417101741383739 1 0.793797731399536 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38117444 chr4:38117447 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_21052 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:38117426-38117456
64251 chrX 70360552 70360552 1 + G A COAD 70360532 + 70360512 70360552 41 ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCG ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCA < 41bp 1 0.747925008557113 1 0.902923047542572 experiment 0.504149982885775 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout MED12 ENSG00000184634 CDS Human protein_coding chrX:70360532 chrX:70360552 nonsynonymous SNV 0.995 0 41 hm5C_associated_SNPs_21053 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:70360523-70360557
64251 chr16 77228826 77228826 1 + G A COAD 77228810 + 77228790 77228830 41 CTATGCCTGTCTGCCTGCTGCTGCTTGGCACCCAACGTGAA CTATGCCTGTCTGCCTGCTGCTGCTTGGCACCCAACATGAA < 41bp 1 0.299844019793565 1 0.31962651014328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77228810 chr16:77228826 nonsynonymous SNV 0.198 3 37 hm5C_associated_SNPs_21055 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77228792-77228828
64251 chr19 4493761 4493761 1 + C T COAD 4493768 + 4493748 4493788 41 GCCAAGCCTGAGCCGGTGGCCATGGCGCGGTCGGCGTCCTC GCCAAGCCTGAGCTGGTGGCCATGGCGCGGTCGGCGTCCTC < 41bp 1 0.396870204314031 1 0.390543162822723 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4493768 chr19:4493761 nonsynonymous SNV 0.021 0 14 hm5C_associated_SNPs_21057 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr19:4493736-4493762
64251 chr1 26136187 26136187 1 + T C COAD 26136177 + 26136157 26136197 41 GATCCCCTTCCCCACAGGATCCATGCCGAGTTCCAGCTCAG GATCCCCTTCCCCACAGGATCCATGCCGAGCTCCAGCTCAG < 41bp 1 0.128509730333239 1 0.0390692353248596 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136177 chr1:26136187 nonsynonymous SNV 0.983 5 31 hm5C_associated_SNPs_21058 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:26136180-26136200
64251 chr19 17615407 17615407 1 + G A COAD 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGCACCTTCGCCCT < 41bp 1 0.343701421631552 1 0.268228888511658 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615407 nonsynonymous SNV 0.020 0 31 hm5C_associated_SNPs_21059 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr16 560768 560768 1 + G A COAD 560748 + 560728 560768 41 CCCGGCGTCAGAAGGAGCTCCTGTGCAAGATGGAGAGGGAG CCCGGCGTCAGAAGGAGCTCCTGTGCAAGATGGAGAGGGAA < 41bp 1 0.139461976833476 1 0.47238028049469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:560748 chr16:560768 synonymous SNV . 0 41 hm5C_associated_SNPs_21060 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:560760-560780
64251 chr19 46887123 46887123 1 + G A COAD 46887105 + 46887085 46887125 41 CTCCTCAACATATTCGAGCTCAACGGTTTACCCTCGGAGAC CTCCTCAACATATTCGAGCTCAACGGTTTACCCTCGGAAAC < 41bp 1 0.566939323563152 1 0.114431500434875 experiment 0.866121352873696 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46887105 chr19:46887123 synonymous SNV . 0 39 hm5C_associated_SNPs_21062 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:46887073-46887129
64251 chr19 39948328 39948328 1 + G A COAD 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATGAATATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA < 41bp 1 0.265752361855078 1 0.173847705125809 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948328 synonymous SNV . 0 6 hm5C_associated_SNPs_21064 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948328 39948328 1 + G A COAD 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATGAATATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG < 41bp 1 0.506813531501027 1 0.241517126560211 experiment 0.986372936997946 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948328 synonymous SNV . 0 5 hm5C_associated_SNPs_21065 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr7 40102463 40102463 1 + G A COAD 40102465 + 40102445 40102485 41 TAATTACTTTATGGTACCGTCCACCTGAACTGCTACTGGGA TAATTACTTTATGGTACCATCCACCTGAACTGCTACTGGGA < 41bp 1 0.054628555742865 1 0.231039971113205 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102465 chr7:40102463 nonsynonymous SNV 0.997 3 19 hm5C_associated_SNPs_21066 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr7:40102445-40102468
64251 chr2 73477030 73477030 1 + G A COAD 73477026 + 73477006 73477046 41 ATGCCAGGTGTTTGAAGAGACCCAGATTGGAGGCGAGAGGT ATGCCAGGTGTTTGAAGAGACCCAAATTGGAGGCGAGAGGT < 41bp 1 0.634384957480044 1 0.53596431016922 experiment 0.731230085039913 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477026 chr2:73477030 synonymous SNV . 0 25 hm5C_associated_SNPs_21067 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr11 126215295 126215295 1 + G A COAD 126215278 + 126215258 126215298 41 GCTACCGGATGAAGGGAGACCATCTGCGAGTATACCTGCAC GCTACCGGATGAAGGGAGACCATCTGCGAGTATACCTACAC < 41bp 1 0.275698310126948 1 0.140413582324982 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DCPS ENSG00000110063 CDS Human protein_coding chr11:126215278 chr11:126215295 synonymous SNV . 0 38 hm5C_associated_SNPs_21068 0 0 1 LARP4 POSTAR2 ENCODE chr11:126215282-126215391
64251 chr10 94449947 94449947 1 + G A COAD 94449964 + 94449944 94449984 41 CCCGGTGTACGAGCCCACGCCGATCCATCCAGCCTTCTCGC CCCAGTGTACGAGCCCACGCCGATCCATCCAGCCTTCTCGC < 41bp 1 0.347931389434273 1 0.236024051904678 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HHEX ENSG00000152804 CDS Human protein_coding chr10:94449964 chr10:94449947 synonymous SNV . 0 4 hm5C_associated_SNPs_21069 0 0 4 DDX3X POSTAR2 ENCODE chr10:94449902-94449948
64251 chr9 140002996 140002996 1 + G A COAD 140002991 + 140002971 140003011 41 AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAG AAACCTGCTCAGCCTGGATGCCTACATGTTCAACACCGAAG < 41bp 1 0.0360146267422742 1 0.313847064971924 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002991 chr9:140002996 nonsynonymous SNV 0.817 4 26 hm5C_associated_SNPs_21071 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140002996 140002996 1 + G A COAD 140002992 + 140002972 140003012 41 AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAGC AACCTGCTCAGCCTGGATGCCTACATGTTCAACACCGAAGC < 41bp 1 0.649746302993845 1 0.47085976600647 experiment 0.700507394012309 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002992 chr9:140002996 nonsynonymous SNV 0.817 4 25 hm5C_associated_SNPs_21072 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr15 29346701 29346701 1 + C T COAD 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACATCGGCGCCTCCCCCTACCG < 41bp 1 0.510479479105221 1 0.215628504753113 experiment 0.979041041789558 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346701 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_21073 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346701 29346701 1 + C T COAD 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACATCGGCGCCTCCCCCTACCGCCT < 41bp 1 0.785374380156799 1 0.749068856239319 experiment 0.429251239686402 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346701 nonsynonymous SNV 0.000 1 20 hm5C_associated_SNPs_21074 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr19 4037381 4037381 1 + G A COAD 4037380 + 4037360 4037400 41 GCCTCGCCCCAGGCTCCTCTCGAAGATCCTGAGCGAGTGTG GCCTCGCCCCAGGCTCCTCTCAAAGATCCTGAGCGAGTGTG < 41bp 1 0.506254036679483 1 0.174300372600555 experiment 0.987491926641035 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PIAS4 ENSG00000105229 CDS Human protein_coding chr19:4037380 chr19:4037381 synonymous SNV . 0 22 hm5C_associated_SNPs_21075 0 0 14 LIN28B POSTAR2 GSE44616,GSM1087851 chr19:4037365-4037388
64251 chr12 56532018 56532018 1 + C T COAD 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGTG < 41bp 1 0.0615347657234708 1 0.521020352840424 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56532018 nonsynonymous SNV 0.974 0 40 hm5C_associated_SNPs_21076 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:56532000-56532020
64251 chr12 56532018 56532018 1 + C T COAD 56532000 + 56531980 56532020 41 AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGT AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGTGT < 41bp 1 0.502852179754615 1 0.540765821933746 experiment 0.99429564049077 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532000 chr12:56532018 nonsynonymous SNV 0.974 0 39 hm5C_associated_SNPs_21077 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:56532000-56532020
64251 chr12 101674904 101674904 1 + T G COAD 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACATGTGCTGAACGACTGGGGAATGTTAATATTGAT < 41bp 1 0.372653390918184 1 0.273505926132202 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674904 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_21079 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chr12 112321465 112321465 1 + C T COAD 112321470 + 112321450 112321490 41 CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCGAA CTCCAAACACCACAGTCGGACTATCCCAAAGGATATGCGAA < 41bp 1 0.039787094541236 1 0.153089553117752 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321470 chr12:112321465 synonymous SNV . 0 16 hm5C_associated_SNPs_21080 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chr1 171501776 171501776 1 + C T COAD 171501758 + 171501738 171501778 41 AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGTGT < 41bp 1 0.582383249868934 1 0.748041808605194 experiment 0.835233500262132 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171501758 chr1:171501776 nonsynonymous SNV 0.954 2 39 hm5C_associated_SNPs_21082 0 0 16 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:171501740-171501779
64251 chr19 39911719 39911719 1 + G A COAD 39911718 + 39911698 39911738 41 CTGTGTCCTCCCCGCAGAGCCGGTGAAGGACCCTTATGTCA CTGTGTCCTCCCCGCAGAGCCAGTGAAGGACCCTTATGTCA < 41bp 1 0.285209219640567 1 0.488523125648499 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39911718 chr19:39911719 synonymous SNV . 0 22 hm5C_associated_SNPs_21084 0 0 1 SF3A3 POSTAR2 ENCODE chr19:39911672-39911729
64251 chr2 118582628 118582628 1 + A G COAD 118582619 + 118582599 118582639 41 CTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGT CTTCTTTTCATCTTGTATGTCTGTGAAATGCCACTATGAGT < 41bp 1 0.390476453675902 1 0.164324015378952 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582619 chr2:118582628 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_21085 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:118582607-118582647
64251 chr7 5269320 5269320 1 + C T COAD 5269313 + 5269293 5269333 41 CTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAA CTGCCCCTTAGTCACTCAGACATACGGTGCAGCTGCAGGAA < 41bp 1 0.122744346055699 1 0.0646177232265472 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269313 chr7:5269320 synonymous SNV . 0 28 hm5C_associated_SNPs_21086 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5269301-5269331
64251 chrX 150565810 150565810 1 + C T COAD 150565821 + 150565801 150565841 41 GGCGCTGAACGCACTGCAGCCTCCTGAGTTCAGGTAGCCCT GGCGCTGAATGCACTGCAGCCTCCTGAGTTCAGGTAGCCCT < 41bp 1 0.789032221002766 1 0.171735405921936 experiment 0.421935557994468 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150565821 chrX:150565810 synonymous SNV . 0 10 hm5C_associated_SNPs_21087 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:150565784-150565842
64251 chr2 36668428 36668428 1 + G A COAD 36668446 + 36668426 36668466 41 CCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT CCACTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT < 41bp 1 0.663865056206047 1 0.713518142700195 experiment 0.672269887587907 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668446 chr2:36668428 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_21089 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:36668419-36668457
64251 chr2 36668428 36668428 1 + G A COAD 36668448 + 36668428 36668468 41 GCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCT ACTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCT < 41bp 1 0.515288136804075 1 0.566323399543762 experiment 0.96942372639185 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668448 chr2:36668428 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_21090 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:36668419-36668457
64251 chr21 46888602 46888602 1 + A C COAD 46888598 + 46888578 46888618 41 TACGTGGACTGTGAGGAGTTCCAGAGAATGCCGCTTGCTCG TACGTGGACTGTGAGGAGTTCCAGCGAATGCCGCTTGCTCG < 41bp 1 0.120791370316417 1 0.561692655086517 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46888598 chr21:46888602 synonymous SNV . 0 25 hm5C_associated_SNPs_21091 0 0 1 SND1 POSTAR2 ENCODE chr21:46888583-46888683
64251 chr3 38417643 38417643 1 + G A COAD 38417623 + 38417603 38417643 41 TGCAGCTTTAAAAATGGCTCCCTCATGAGAGAGAAGATCCG TGCAGCTTTAAAAATGGCTCCCTCATGAGAGAGAAGATCCA < 41bp 1 0.0560589754263469 1 0.0736116170883179 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XYLB ENSG00000093217 CDS Human protein_coding chr3:38417623 chr3:38417643 nonsynonymous SNV 0.430 5 41 hm5C_associated_SNPs_21104 0 0 3 BUD13 POSTAR2 ENCODE chr3:38417609-38417679
64251 chr16 90030983 90030983 1 + G A COAD 90030968 + 90030948 90030988 41 GTCTGTGTGCGCCGACTGCTCCGCGGTCTTCCACAGGTGGG GTCTGTGTGCGCCGACTGCTCCGCGGTCTTCCACAAGTGGG < 41bp 1 0.796014494989507 1 0.166559249162674 experiment 0.407971010020986 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90030968 chr16:90030983 nonsynonymous SNV 0.993 1 36 hm5C_associated_SNPs_21105 0 0 1 PRPF8 POSTAR2 ENCODE chr16:90030977-90031028
64251 chr15 100215617 100215617 1 + C T COAD 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC TACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC < 41bp 1 0.311373321025375 1 0.508222341537476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215617 synonymous SNV . 0 1 hm5C_associated_SNPs_21106 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:100215612-100215637
64251 chr17 78318484 78318484 1 + C T COAD 78318498 + 78318478 78318518 41 CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC CGTACATGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC < 41bp 1 0.0490730314911941 1 0.0280595719814301 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78318498 chr17:78318484 nonsynonymous SNV 0.002 0 7 hm5C_associated_SNPs_21111 0 0 1 FXR2 POSTAR2 ENCODE chr17:78318481-78318486
64251 chr1 45973941 45973941 1 + C T COAD 45973929 + 45973909 45973949 41 TCATTGCTGACTACGAGGTGCACCCCAACCGACGCCCCAAG TCATTGCTGACTACGAGGTGCACCCCAACCGATGCCCCAAG < 41bp 1 0.232376257133707 1 0.048687607049942 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMACHC ENSG00000132763 CDS Human protein_coding chr1:45973929 chr1:45973941 nonsynonymous SNV 0.977 5 33 hm5C_associated_SNPs_21112 1 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:45973933-45973973
64251 chr16 50261779 50261779 1 + G A COAD 50261765 + 50261745 50261785 41 GTTAGGATTCCGATGCAACACCATGCAAAACCCCGAAACAG GTTAGGATTCCGATGCAACACCATGCAAAACCCCAAAACAG < 41bp 1 0.224552192189938 1 0.608963489532471 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50261765 chr16:50261779 synonymous SNV . 0 35 hm5C_associated_SNPs_21113 0 0 1 IGF2BP1 POSTAR2 ENCODE chr16:50261746-50261910
64251 chr19 36124656 36124656 1 + C T COAD 36124636 + 36124616 36124656 41 GGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGC GGCCTAGGCCTGGGGTTGGGCCTGAAAGAGAAGGAAGAGGT < 41bp 1 0.531131199892682 1 0.244213461875916 experiment 0.937737600214636 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124636 chr19:36124656 nonsynonymous SNV 0.996 0 41 hm5C_associated_SNPs_21115 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:36124654-36124692
64251 chr17 79671702 79671702 1 + G T COAD 79671721 + 79671701 79671741 41 GGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC GTGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC < 41bp 1 0.106952421944727 1 0.0668188333511353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671721 chr17:79671702 nonsynonymous SNV 0.024 4 2 hm5C_associated_SNPs_21116 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79671662-79671723
64251 chr12 6637448 6637448 1 + C T COAD 6637450 + 6637430 6637470 41 ACTGGGGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC ACTGGGGATCTGGCCATCTGCTTTCCCAATCTGGTGGACCC < 41bp 1 0.0923862424564445 1 0.066482812166214 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637450 chr12:6637448 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_21117 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:6637390-6637461
64251 chr10 35854955 35854955 1 + G A COAD 35854964 + 35854944 35854984 41 TTTGCAGGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTG TTTGCAGGAACAAGCTAGAGCGACAGTTTCTTGAATTGCTG < 41bp 1 0.543504089854992 1 0.278145253658295 experiment 0.912991820290017 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNY ENSG00000108100 CDS Human protein_coding chr10:35854964 chr10:35854955 nonsynonymous SNV 0.992 3 12 hm5C_associated_SNPs_21118 0 0 3 U2AF2 POSTAR2 ENCODE chr10:35854939-35854981
64251 chr16 30975430 30975430 1 + C T COAD 30975417 + 30975397 30975437 41 CCTGCTCTGTCGCTCTAGGCCGAATCCCGCCGCCGCTCTTC CCTGCTCTGTCGCTCTAGGCCGAATCCCGCCGCTGCTCTTC < 41bp 1 0.21120062649177 1 0.202542185783386 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30975417 chr16:30975430 nonsynonymous SNV 0.995 3 34 hm5C_associated_SNPs_21119 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30975418-30975447
64251 chr19 17392883 17392883 1 + T C COAD 17392879 + 17392859 17392899 41 TTTGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGAC TTTGCAGGGCAGTAGAGGAGCTGCCGCGCTGCGGCGCGGAC < 41bp 1 0.45360564560903 1 0.252821385860443 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17392879 chr19:17392883 nonsynonymous SNV 0.716 4 25 hm5C_associated_SNPs_21121 0 0 2 PPIG POSTAR2 ENCODE chr19:17392861-17392997
64251 chr6 107100424 107100424 1 + A C COAD 107100423 + 107100403 107100443 41 ATTCATGCTTCCCAGTTTGGCAGATGTGAGCAAACTATGTA ATTCATGCTTCCCAGTTTGGCCGATGTGAGCAAACTATGTA < 41bp 1 0.259961810830874 1 0.143926978111267 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107100423 chr6:107100424 synonymous SNV . 0 22 hm5C_associated_SNPs_21122 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:107100411-107100446
64251 chr4 1018713 1018713 1 + C T COAD 1018696 + 1018676 1018716 41 TCCTCTCGCTCTTGCAGACCCAAAACCGCCAGGGCCACCTG TCCTCTCGCTCTTGCAGACCCAAAACCGCCAGGGCCATCTG < 41bp 1 0.630983902761169 1 0.22291362285614 experiment 0.738032194477661 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1018696 chr4:1018713 nonsynonymous SNV 0.073 0 38 hm5C_associated_SNPs_21123 0 0 1 PRPF8 POSTAR2 ENCODE chr4:1018689-1018714
64251 chr16 70509341 70509341 1 + C T COAD 70509347 + 70509327 70509367 41 CTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTG CTGCTCCGCACCTTTGGGGGCGGCTTTGAGCTGCACACCTG < 41bp 1 0.413374376216956 1 0.414639115333557 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70509347 chr16:70509341 synonymous SNV . 0 15 hm5C_associated_SNPs_21126 0 0 1 PPIG POSTAR2 ENCODE chr16:70509294-70509394
64251 chr1 24979099 24979099 1 + G T COAD 24979097 + 24979077 24979117 41 CTTCTCACACTCGACCTAGACGGCGCCATAGATCCCGATCA CTTCTCACACTCGACCTAGACGTCGCCATAGATCCCGATCA < 41bp 1 0.393273953353938 1 0.340868562459946 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24979097 chr1:24979099 synonymous SNV . 0 23 hm5C_associated_SNPs_21127 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24979060-24979100
64251 chr6 7572263 7572263 1 + T C COAD 7572244 + 7572224 7572264 41 AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGACC < 41bp 1 0.0340350088039412 1 0.0659577250480652 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572244 chr6:7572263 nonsynonymous SNV 0.418 0 40 hm5C_associated_SNPs_21128 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:7572229-7572280
64251 chr19 41135394 41135394 1 + G A COAD 41135396 + 41135376 41135416 41 CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC CCTTCCGCTGCATCTGCCACCCGGGATTCGCACCCACGCAC < 41bp 1 0.635030753903843 1 0.896353840827942 experiment 0.729938492192314 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135396 chr19:41135394 nonsynonymous SNV 0.035 1 19 hm5C_associated_SNPs_21129 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41135363-41135406
64251 chr1 46073985 46073985 1 + G A COAD 46073974 + 46073954 46073994 41 GATAGCTGCTAATGAAGAGACACAAGAGAGAGAAGAACAGA GATAGCTGCTAATGAAGAGACACAAGAGAGAAAAGAACAGA < 41bp 1 0.67193828163513 1 0.504048466682434 experiment 0.656123436729741 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073974 chr1:46073985 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_21130 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46073952-46074031
64251 chr1 46073985 46073985 1 + G A COAD 46073991 + 46073971 46074011 41 AGACACAAGAGAGAGAAGAACAGATGAAAGAGGGTGAAGGT AGACACAAGAGAGAAAAGAACAGATGAAAGAGGGTGAAGGT < 41bp 1 0.523986950897477 1 0.638064444065094 experiment 0.952026098205045 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NASP ENSG00000132780 CDS Human protein_coding chr1:46073991 chr1:46073985 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_21131 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46073952-46074031
64251 chr11 65826382 65826382 1 + C T COAD 65826372 + 65826352 65826392 41 CGAGGGGTGTCCTCTGAGAGCTCTGGGGACCGGGAGAAAGA CGAGGGGTGTCCTCTGAGAGCTCTGGGGACTGGGAGAAAGA < 41bp 1 0.455442286028717 1 0.470812827348709 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826372 chr11:65826382 nonsynonymous SNV 0.991 2 31 hm5C_associated_SNPs_21132 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chr14 21553988 21553988 1 + T C COAD 21553984 + 21553964 21554004 41 CAAACTCAAGTGGACAAGTTCTATTGCCCAGCTGCTGTGGA CAAACTCAAGTGGACAAGTTCTATCGCCCAGCTGCTGTGGA < 41bp 1 0.0913531177627636 1 0.0462859272956848 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21553984 chr14:21553988 synonymous SNV . 0 25 hm5C_associated_SNPs_21133 0 0 1 UCHL5 POSTAR2 ENCODE chr14:21553971-21554019
64251 chr2 73114727 73114727 1 + G A COAD 73114733 + 73114713 73114753 41 AGGCCGAGCTGGGCGCCGAGCGGTCTGGCCTGCGCGTGGTG AGGCCGAGCTGGGCACCGAGCGGTCTGGCCTGCGCGTGGTG < 41bp 1 0.402264080888411 1 0.756728768348694 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPR ENSG00000116096 CDS Human protein_coding chr2:73114733 chr2:73114727 nonsynonymous SNV 0.210 1 15 hm5C_associated_SNPs_21134 0 0 2 DDX3X POSTAR2 ENCODE chr2:73114531-73114758
64251 chr8 145065693 145065693 1 + A G COAD 145065698 + 145065678 145065718 41 AAGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTC AAGGGGGCTACCCCCGGGGGCCATATCCCCAGAGCCCCTTC < 41bp 1 0.213198020408098 1 0.0583626329898834 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065698 chr8:145065693 nonsynonymous SNV 0.893 0 16 hm5C_associated_SNPs_21135 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr8 145065693 145065693 1 + A G COAD 145065699 + 145065679 145065719 41 AGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTCC AGGGGGCTACCCCCGGGGGCCATATCCCCAGAGCCCCTTCC < 41bp 1 0.170403536616743 1 0.154354065656662 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065699 chr8:145065693 nonsynonymous SNV 0.893 0 15 hm5C_associated_SNPs_21136 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr11 67079303 67079303 1 + G A COAD 67079295 + 67079275 67079315 41 CCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAG CCCTGCATTTCCTCTACGCCCAGGTTCCAGAAGGTGGTGAG < 41bp 1 0.618686329393712 1 0.506246447563171 experiment 0.762627341212576 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67079295 chr11:67079303 nonsynonymous SNV 0.934 0 29 hm5C_associated_SNPs_21137 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67079289-67079332
64251 chr22 42280888 42280888 1 + C T COAD 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGTGTTGT < 41bp 1 0.277419888639602 1 0.165903717279434 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280888 nonsynonymous SNV 0.680 3 36 hm5C_associated_SNPs_21138 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42280875-42280901
64251 chr3 194408006 194408006 1 + A G COAD 194408016 + 194407996 194408036 41 GCGGCTGCCCAAGGTCTTCGCCTGGGTGTACCGGCACGAGC GCGGCTGCCCGAGGTCTTCGCCTGGGTGTACCGGCACGAGC < 41bp 1 0.515314613705638 1 0.376313537359238 experiment 0.969370772588725 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAM43A ENSG00000185112 CDS Human protein_coding chr3:194408016 chr3:194408006 nonsynonymous SNV 0.996 3 11 hm5C_associated_SNPs_21139 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr3:194408006-194408038
64251 chr3 194408006 194408006 1 + A G COAD 194408017 + 194407997 194408037 41 CGGCTGCCCAAGGTCTTCGCCTGGGTGTACCGGCACGAGCT CGGCTGCCCGAGGTCTTCGCCTGGGTGTACCGGCACGAGCT < 41bp 1 0.74124497306695 1 0.851900219917297 experiment 0.517510053866101 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM43A ENSG00000185112 CDS Human protein_coding chr3:194408017 chr3:194408006 nonsynonymous SNV 0.996 3 10 hm5C_associated_SNPs_21140 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr3:194408006-194408038
64251 chr12 71977624 71977624 1 + G A COAD 71977616 + 71977596 71977636 41 GAACATGCTCACGGGAGTCTCCAGTGCCGTGCTGGCTGGTG GAACATGCTCACGGGAGTCTCCAGTGCCATGCTGGCTGGTG < 41bp 1 0.421914924993203 1 0.683469414710999 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977616 chr12:71977624 nonsynonymous SNV 0.004 1 29 hm5C_associated_SNPs_21141 0 0 1 SND1 POSTAR2 ENCODE chr12:71977601-71977649
64251 chr2 211525367 211525367 1 + T C COAD 211525357 + 211525337 211525377 41 ATTGGACCATCCCATAATTCCTGCTGACTATGTTGCAATTA ATTGGACCATCCCATAATTCCTGCTGACTACGTTGCAATTA < 41bp 1 0.349943431592483 1 0.0398069024085999 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211525357 chr2:211525367 synonymous SNV . 0 31 hm5C_associated_SNPs_21142 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:211525341-211525368
64251 chr19 50902126 50902126 1 + G A COAD 50902140 + 50902120 50902160 41 GCGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG GCGGCGACCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG < 41bp 1 0.548211864068166 1 0.730579316616058 experiment 0.903576271863667 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902140 chr19:50902126 synonymous SNV . 0 7 hm5C_associated_SNPs_21143 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr19 50902126 50902126 1 + G A COAD 50902141 + 50902121 50902161 41 CGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC CGGCGACCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC < 41bp 1 0.761318604866063 1 0.851008534431458 experiment 0.477362790267875 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902141 chr19:50902126 synonymous SNV . 0 6 hm5C_associated_SNPs_21144 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr1 26883496 26883496 1 + A G COAD 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATGCCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC < 41bp 1 0.287250581672401 1 0.697667419910431 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883496 nonsynonymous SNV 0.935 2 8 hm5C_associated_SNPs_21146 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr2 32666440 32666440 1 + G A COAD 32666438 + 32666418 32666458 41 AATGAAAATACAAGTGGCACCCGTAAATCTGAAAACCTCCG AATGAAAATACAAGTGGCACCCATAAATCTGAAAACCTCCG < 41bp 1 0.0260662581430005 1 0.2214075922966 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32666438 chr2:32666440 nonsynonymous SNV 0.973 1 23 hm5C_associated_SNPs_21147 0 0 1 CDC40 POSTAR2 ENCODE chr2:32666424-32666456
64251 chr12 124239081 124239081 1 + G A COAD 124239064 + 124239044 124239084 41 CTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACGCAC CTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACACAC < 41bp 1 0.271394087098168 1 0.099140077829361 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239064 chr12:124239081 nonsynonymous SNV 0.961 5 38 hm5C_associated_SNPs_21149 0 0 1 PRPF8 POSTAR2 ENCODE chr12:124239069-124239120
64251 chr19 1037814 1037814 1 + G T COAD 1037820 + 1037800 1037840 41 CACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCC CACAGTGGCCGATGTGGCTCCCTCGGGCACCGGCGACTGCC < 41bp 1 0.20183570351382 1 0.119029760360718 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037820 chr19:1037814 nonsynonymous SNV 0.008 1 15 hm5C_associated_SNPs_21150 0 0 5 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr22 42262915 42262915 1 + A G COAD 42262909 + 42262889 42262929 41 AACAGCTGTGTAGCTCCTTTCCTGGCAGTGGTGGTAGTGGT AACAGCTGTGTAGCTCCTTTCCTGGCGGTGGTGGTAGTGGT < 41bp 1 0.150229895369388 1 0.213263690471649 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42262909 chr22:42262915 nonsynonymous SNV 0.212 0 27 hm5C_associated_SNPs_21154 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:42262888-42262916
64251 chrX 48417378 48417378 1 + C T COAD 48417383 + 48417363 48417403 41 CATCACTGACGACTGCCGCCCTGCCCTTTACACAGTCCATC CATCACTGACGACTGTCGCCCTGCCCTTTACACAGTCCATC < 41bp 1 0.191792462107121 1 0.0442826747894287 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48417383 chrX:48417378 nonsynonymous SNV 0.984 0 16 hm5C_associated_SNPs_21155 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:48417364-48417380
64251 chr1 110559004 110559004 1 + C T COAD 110558996 + 110558976 110559016 41 CTCTCCAAAGCTGGGAAGCTCTGTGTTCCGGCCATGAACGT CTCTCCAAAGCTGGGAAGCTCTGTGTTCTGGCCATGAACGT < 41bp 1 0.466733550460475 1 0.0671622455120087 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110558996 chr1:110559004 nonsynonymous SNV 0.982 5 29 hm5C_associated_SNPs_21157 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110558982-110559021
64251 chr2 202141582 202141582 1 + A G COAD 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAGCCTCGGGGATACTGTCTGATCATCAACAATCA < 41bp 1 0.316301072263737 1 0.273353666067123 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141582 nonsynonymous SNV 0.878 0 9 hm5C_associated_SNPs_21161 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:202141579-202141603
64251 chr14 24617679 24617679 1 + T C COAD 24617684 + 24617664 24617704 41 CTGGGGAGCCCAGCCTAACTCAAGTAAGTTTGAGGACCCCC CTGGGGAGCCCAGCCCAACTCAAGTAAGTTTGAGGACCCCC < 41bp 1 0.383498841046875 1 0.379353165626526 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617684 chr14:24617679 nonsynonymous SNV 0.033 1 16 hm5C_associated_SNPs_21163 0 0 1 PRPF8 POSTAR2 ENCODE chr14:24617624-24617683
64251 chr5 139909168 139909168 1 + T A COAD 139909148 + 139909128 139909168 41 TTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACT TTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACA < 41bp 1 0.0733960407171764 1 0.0768877863883972 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139909148 chr5:139909168 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_21164 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:139909125-139909172
64251 chr22 42042975 42042975 1 + T C COAD 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAAGCCCCCTCCAATAAAGCTCTATCGG < 41bp 1 0.0745788963910086 1 0.243395268917084 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042975 synonymous SNV . 0 20 hm5C_associated_SNPs_21165 0 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr22:42042960-42042980
64251 chr17 17697990 17697990 1 + C T COAD 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGCCTACATGGCAGTCTGCCGCTCGACAGCTTCTCCAAG < 41bp 1 0.0620785652155458 1 0.0133803188800812 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17697990 synonymous SNV . 0 11 hm5C_associated_SNPs_21167 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr17:17697929-17697992
64251 chr17 41345510 41345510 1 + G A COAD 41345492 + 41345472 41345512 41 TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGCGTC TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGCATC < 41bp 1 0.217860618370541 1 0.0788317620754242 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345492 chr17:41345510 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_21168 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41345493-41345517
64251 chr11 118405277 118405277 1 + T C COAD 118405286 + 118405266 118405306 41 AGCGTGAGCAGTGATGAGATCTGGCTCTGAGCCGAGGGCGA AGCGTGAGCAGCGATGAGATCTGGCTCTGAGCCGAGGGCGA < 41bp 1 0.607481359605798 1 0.458403885364532 experiment 0.785037280788404 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118405286 chr11:118405277 synonymous SNV . 0 12 hm5C_associated_SNPs_21169 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955512 chr11:118405260-118405280
64251 chr11 118405277 118405277 1 + T C COAD 118405290 + 118405270 118405310 41 TGAGCAGTGATGAGATCTGGCTCTGAGCCGAGGGCGAGACA TGAGCAGCGATGAGATCTGGCTCTGAGCCGAGGGCGAGACA < 41bp 1 0.301954586295442 1 0.060281366109848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118405290 chr11:118405277 synonymous SNV . 0 8 hm5C_associated_SNPs_21170 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955512 chr11:118405260-118405280
64251 chr11 118405277 118405277 1 + T C COAD 118405292 + 118405272 118405312 41 AGCAGTGATGAGATCTGGCTCTGAGCCGAGGGCGAGACAGG AGCAGCGATGAGATCTGGCTCTGAGCCGAGGGCGAGACAGG < 41bp 1 0.616057937881851 1 0.170052498579025 experiment 0.767884124236298 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118405292 chr11:118405277 synonymous SNV . 0 6 hm5C_associated_SNPs_21171 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955512 chr11:118405260-118405280
64251 chr16 70509348 70509348 1 + G A COAD 70509347 + 70509327 70509367 41 CTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTG CTGCTCCGCACCTTCGGGGGCAGCTTTGAGCTGCACACCTG < 41bp 1 0.362170201058777 1 0.303028285503387 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70509347 chr16:70509348 nonsynonymous SNV 0.776 4 22 hm5C_associated_SNPs_21172 0 0 2 BUD13 POSTAR2 ENCODE chr16:70509346-70509407
64251 chr11 75280007 75280007 1 + G A COAD 75279988 + 75279968 75280008 41 TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGACGA TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGACAA < 41bp 1 0.568083100635948 1 0.832947850227356 experiment 0.863833798728104 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279988 chr11:75280007 nonsynonymous SNV 0.947 1 40 hm5C_associated_SNPs_21173 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:75279984-75280022
64251 chr11 75280007 75280007 1 + G A COAD 75280006 + 75279986 75280026 41 CTCTACAACTACTACGACGACGAGAAGGAAAAGCTGCAAAT CTCTACAACTACTACGACGACAAGAAGGAAAAGCTGCAAAT < 41bp 1 0.728792804055332 1 0.519886493682861 experiment 0.542414391889337 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75280006 chr11:75280007 nonsynonymous SNV 0.947 1 22 hm5C_associated_SNPs_21174 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:75279984-75280022
64251 chr17 6012943 6012943 1 + T A COAD 6012962 + 6012942 6012982 41 ATTCTCAGGGGCTGGGAATGCTACTGTGCTTACCCTACCCC AATCTCAGGGGCTGGGAATGCTACTGTGCTTACCCTACCCC < 41bp 1 0.599850823257624 1 0.435378402471542 experiment 0.800298353484752 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6012962 chr17:6012943 nonsynonymous SNV 0.992 1 2 hm5C_associated_SNPs_21175 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:6012929-6012957
64251 chr13 93879789 93879789 1 + C T COAD 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGTTC < 41bp 1 0.57437866373525 1 0.802209675312042 experiment 0.851242672529499 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879789 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_21176 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:93879780-93879800
64251 chr7 134552485 134552485 1 + A G COAD 134552471 + 134552451 134552491 41 CATCATCTGGTCTCCCTGAACCTGAAATCACACCATGGATG CATCATCTGGTCTCCCTGAACCTGAAATCACACCGTGGATG < 41bp 1 0.458356802599252 1 0.242856711149216 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CALD1 ENSG00000122786 CDS Human protein_coding chr7:134552471 chr7:134552485 nonsynonymous SNV 0.978 2 35 hm5C_associated_SNPs_21178 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:134552460-134552486
64251 chr11 66034014 66034014 1 + C T COAD 66034001 + 66033981 66034021 41 TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGCGTGCTGC TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGTGTGCTGC < 41bp 1 0.706320037100864 1 0.783917546272278 experiment 0.587359925798271 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC2 ENSG00000174996 CDS Human protein_coding chr11:66034001 chr11:66034014 nonsynonymous SNV 0.000 2 34 hm5C_associated_SNPs_21179 0 0 1 PRPF8 POSTAR2 ENCODE chr11:66033943-66034025
64251 chr1 161751757 161751757 1 + A G COAD 161751776 + 161751756 161751796 41 GACATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA GGCATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA < 41bp 1 0.181838701282624 1 0.138510763645172 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751776 chr1:161751757 nonsynonymous SNV 0.984 0 2 hm5C_associated_SNPs_21180 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:161751722-161751767
64251 chr1 32627990 32627990 1 + G A COAD 32628006 + 32627986 32628026 41 TCTCGCCTACTCTTCAGCAGCGACTCGGACTTGCTGGCAGA TCTCACCTACTCTTCAGCAGCGACTCGGACTTGCTGGCAGA < 41bp 1 0.287347359167707 1 0.0953533947467804 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32628006 chr1:32627990 nonsynonymous SNV 0.997 1 5 hm5C_associated_SNPs_21182 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:32627969-32628039
64251 chr1 162492294 162492294 1 + C T COAD 162492304 + 162492284 162492324 41 ACATTCTACCCGCTGAGTGCCTACAAGAGGGGATATCTGTA ACATTCTACCTGCTGAGTGCCTACAAGAGGGGATATCTGTA < 41bp 1 0.523669099738704 1 0.791084825992584 experiment 0.952661800522592 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162492304 chr1:162492294 nonsynonymous SNV 0.999 4 11 hm5C_associated_SNPs_21188 1 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr1:162492194-162492305
64251 chr11 35684885 35684885 1 + G T COAD 35684865 + 35684845 35684885 41 CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGG CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGT < 41bp 1 0.771336010922735 1 0.834424257278442 experiment 0.457327978154529 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684865 chr11:35684885 nonsynonymous SNV 0.014 0 41 hm5C_associated_SNPs_21189 0 0 1 FASTKD2 POSTAR2 ENCODE chr11:35684883-35684924
64251 chr10 115661632 115661632 1 + C T COAD 115661650 + 115661630 115661670 41 CTCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCAC CTTGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCAC < 41bp 1 0.791366608667657 1 0.320175319910049 experiment 0.417266782664687 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661650 chr10:115661632 synonymous SNV . 0 3 hm5C_associated_SNPs_21190 0 0 1 UCHL5 POSTAR2 ENCODE chr10:115661535-115661658
64251 chr10 115661632 115661632 1 + C T COAD 115661651 + 115661631 115661671 41 TCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCACT TTGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCACT < 41bp 1 0.232867277617681 1 0.322580635547638 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661651 chr10:115661632 synonymous SNV . 0 2 hm5C_associated_SNPs_21191 0 0 1 UCHL5 POSTAR2 ENCODE chr10:115661535-115661658
64251 chr14 104139512 104139512 1 + G A COAD 104139522 + 104139502 104139542 41 TGGCTAAGACGAAAAATAACCTGGTGTGTTGACTGCACAGC TGGCTAAGACAAAAAATAACCTGGTGTGTTGACTGCACAGC < 41bp 1 0.714616367211534 1 0.36435329914093 experiment 0.570767265576932 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104139522 chr14:104139512 synonymous SNV . 0 11 hm5C_associated_SNPs_21193 0 0 10 CPSF3 POSTAR2 GSE37401,GSM917669 chr14:104139489-104139512
64251 chr6 148865777 148865777 1 + G A COAD 148865775 + 148865755 148865795 41 GCAGCCCACCAAGCACAAGGCCGCCCCCCTGGCTCTCAGAG GCAGCCCACCAAGCACAAGGCCACCCCCCTGGCTCTCAGAG < 41bp 1 0.0572056210556947 1 0.0437221229076385 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865775 chr6:148865777 synonymous SNV . 0 23 hm5C_associated_SNPs_21203 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:148865771-148865834
64251 chr7 139107012 139107012 1 + C T COAD 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGAAGTGGTCCTATGAGAGTGCTAATGGCA < 41bp 1 0.104050782294515 1 0.122359156608582 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107012 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_21214 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107012 139107012 1 + C T COAD 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGTGGTCCTATGAGAGTGCTAATGGCAG < 41bp 1 0.188202270018045 1 0.0912678241729736 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107012 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_21215 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107012 139107012 1 + C T COAD 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGTGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA < 41bp 1 0.312909220296867 1 0.234880119562149 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107012 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_21216 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr16 30440430 30440430 1 - G A COAD 30440424 - 30440404 30440444 41 AGTTCCATCAGCCTCGGAATCTCCTCCTGGCCTTGGTTGGG AGTTCCATCAGCCTTGGAATCTCCTCCTGGCCTTGGTTGGG < 41bp 1 0.514390025088552 1 0.714076578617096 experiment 0.971219949822895 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCTPP1 ENSG00000179958 CDS Human protein_coding chr16:30440424 chr16:30440430 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_21217 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr16:30440384-30440437
64251 chr9 37770015 37770015 1 + C T COAD 37769995 + 37769975 37770015 41 CCTTGGAAACCCTTGTGTACCTGACTCCTGACTCAGAACAC CCTTGGAAACCCTTGTGTACCTGACTCCTGACTCAGAACAT < 41bp 1 0.39773015293669 1 0.0446921586990356 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37769995 chr9:37770015 synonymous SNV . 0 41 hm5C_associated_SNPs_21218 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37769941-37770016
64251 chr9 37770015 37770015 1 + C T COAD 37770013 + 37769993 37770033 41 ACCTGACTCCTGACTCAGAACACGGTATGTAGTTGAATGCA ACCTGACTCCTGACTCAGAACATGGTATGTAGTTGAATGCA < 41bp 1 0.446633434175581 1 0.44210210442543 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37770013 chr9:37770015 synonymous SNV . 0 23 hm5C_associated_SNPs_21219 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37769941-37770016
64251 chr20 60962969 60962969 1 + T C COAD 60962981 + 60962961 60963001 41 TCGTAGGATGGTGAGTGTTTCCCTGGGCTTTGCTCATCACT TCGTAGGACGGTGAGTGTTTCCCTGGGCTTTGCTCATCACT < 41bp 1 0.279452257625002 1 0.118180990219116 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS21 ENSG00000171858 CDS Human protein_coding chr20:60962981 chr20:60962969 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_21221 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60962896-60962970
64251 chr1 156702198 156702198 1 + G A COAD 156702193 + 156702173 156702213 41 CTGGAGAACCCCAGCCAGAGCTCCCGACTAACAGCTCCATT CTGGAGAACCCCAGCCAGAGCTCCCAACTAACAGCTCCATT < 41bp 1 0.33149003806506 1 0.191849648952484 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702193 chr1:156702198 nonsynonymous SNV 0.996 0 26 hm5C_associated_SNPs_21222 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156702155-156702201
64251 chr17 7401131 7401131 1 + C T COAD 7401133 + 7401113 7401153 41 GACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGAC GACCAGGTTGGCGTGCCCTGCTCCATTGCTGCCAACATGAC < 41bp 1 0.71580831663632 1 0.955549716949463 experiment 0.568383366727359 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7401133 chr17:7401131 nonsynonymous SNV 0.995 3 19 hm5C_associated_SNPs_21224 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr17:7401111-7401135
64251 chr12 107712780 107712780 1 + T C COAD 107712763 + 107712743 107712783 41 TGGTGAGAACGCTGGAGGATCTGACGCTGGACTCGGGTTAT TGGTGAGAACGCTGGAGGATCTGACGCTGGACTCGGGCTAT < 41bp 1 0.42249427961149 1 0.403123080730438 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BTBD11 ENSG00000151136 CDS Human protein_coding chr12:107712763 chr12:107712780 synonymous SNV . 0 38 hm5C_associated_SNPs_21225 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:107712780-107712800
64251 chr20 44038674 44038674 1 + T C COAD 44038672 + 44038652 44038692 41 TCCTCCGACTCCTCCACCAACCTGCATAGCCCAAATCCAAG TCCTCCGACTCCTCCACCAACCCGCATAGCCCAAATCCAAG < 41bp 1 0.254600231356879 1 0.298536151647568 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44038672 chr20:44038674 nonsynonymous SNV 0.945 0 23 hm5C_associated_SNPs_21226 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:44038603-44038674
64251 chr19 45165067 45165067 1 + G T COAD 45165047 + 45165027 45165067 41 GAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGG GAGCAGAGAGAACAGCTCTTCCCAGGATCCACAGACAGAGT < 41bp 1 0.250949652776723 1 0.14600870013237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45165047 chr19:45165067 nonsynonymous SNV 0.002 3 41 hm5C_associated_SNPs_21227 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45165041-45165091
64251 chr19 45165067 45165067 1 + G T COAD 45165058 + 45165038 45165078 41 ACAGCTCTTCCCAGGATCCACAGACAGAGGGCACAAGGTGA ACAGCTCTTCCCAGGATCCACAGACAGAGTGCACAAGGTGA < 41bp 1 0.213965088100793 1 0.301909506320953 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45165058 chr19:45165067 nonsynonymous SNV 0.002 3 30 hm5C_associated_SNPs_21228 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45165041-45165091
64251 chr19 45165067 45165067 1 + G T COAD 45165071 + 45165051 45165091 41 GGATCCACAGACAGAGGGCACAAGGTGACAGCGTCGGGACT GGATCCACAGACAGAGTGCACAAGGTGACAGCGTCGGGACT < 41bp 1 0.712497944257891 1 0.677631497383118 experiment 0.575004111484219 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45165071 chr19:45165067 nonsynonymous SNV 0.002 3 17 hm5C_associated_SNPs_21229 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45165041-45165091
64251 chr19 45165067 45165067 1 + G T COAD 45165079 + 45165059 45165099 41 AGACAGAGGGCACAAGGTGACAGCGTCGGGACTGAGAGGGG AGACAGAGTGCACAAGGTGACAGCGTCGGGACTGAGAGGGG < 41bp 1 0.736189538640738 1 0.484210312366486 experiment 0.527620922718524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45165079 chr19:45165067 nonsynonymous SNV 0.002 3 9 hm5C_associated_SNPs_21230 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45165041-45165091
64251 chr11 110035819 110035819 1 + G A COAD 110035817 + 110035797 110035837 41 CAACACATGCACCCTCACAGCCGCCTTAATCCTCAACCGTT CAACACATGCACCCTCACAGCCACCTTAATCCTCAACCGTT < 41bp 1 0.0790852910705506 1 0.0620906054973602 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035817 chr11:110035819 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_21231 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:110035798-110035822
64251 chr19 50906852 50906852 1 + A T COAD 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTACCTCATCTCTCGGGCCCAGACCCTCTAGGTGAGGGCT < 41bp 1 0.0683168216152871 1 0.208764910697937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906852 stopgain 0.996 1 30 hm5C_associated_SNPs_21232 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50906824-50906854
64251 chr19 50906852 50906852 1 + A T COAD 50906851 + 50906831 50906871 41 ATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT ATCTCTCGGGCCCAGACCCTCTAGGTGAGGGCTGGGCAGGT < 41bp 1 0.660981640971446 1 0.741741836071014 experiment 0.678036718057107 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906851 chr19:50906852 stopgain 0.996 1 22 hm5C_associated_SNPs_21233 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50906824-50906854
64251 chr16 31196294 31196294 1 + T C COAD 31196312 + 31196292 31196332 41 AGTGGTGGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCA AGCGGTGGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCA < 41bp 1 0.566816798755213 1 0.53452867269516 experiment 0.866366402489574 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FUS ENSG00000089280 CDS Human protein_coding chr16:31196312 chr16:31196294 synonymous SNV . 0 3 hm5C_associated_SNPs_21234 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:31196260-31196300
64251 chr12 3149347 3149347 1 + C T COAD 3149330 + 3149310 3149350 41 ACCGCATCCACCGGTCCCCGCTCTGTGAGTACATGATCAAC ACCGCATCCACCGGTCCCCGCTCTGTGAGTACATGATTAAC < 41bp 1 0.142867591569405 1 0.447629988193512 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3149330 chr12:3149347 synonymous SNV . 0 38 hm5C_associated_SNPs_21235 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:3149344-3149378
64251 chr14 102499697 102499697 1 + C T COAD 102499701 + 102499681 102499721 41 GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATCCG GACAACCAGCAGAAGGTCAACGAGGTGGAGCAGATGATCCG < 41bp 1 0.351939953558782 1 0.759434223175049 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499701 chr14:102499697 nonsynonymous SNV 0.997 1 17 hm5C_associated_SNPs_21237 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr5 176522651 176522651 1 + C A COAD 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCAGCTCTCCTTCCCAGTCCTGGTCTCCT < 41bp 1 0.0443860503881013 1 0.074124276638031 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522651 nonsynonymous SNV 0.449 2 15 hm5C_associated_SNPs_21239 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr14 68042182 68042182 1 + A C COAD 68042177 + 68042157 68042197 41 ATCTTCTACTACTATCGGAGCCATGAGGACAAGGTACTTCT ATCTTCTACTACTATCGGAGCCATGCGGACAAGGTACTTCT < 41bp 1 0.0319939013228803 1 0.0617979168891907 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68042177 chr14:68042182 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_21240 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:68042157-68042185
64251 chr1 39927582 39927582 1 + C T COAD 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTAGAGATGATTGCTGTGGCTGACATTTTCGACC < 41bp 1 0.176119403793199 1 0.0508017838001251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927582 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_21241 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927571-39927596
64251 chr11 65827422 65827422 1 + T G COAD 65827410 + 65827390 65827430 41 CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGCCAGACT CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCGGCCAGACT < 41bp 1 0.164050399046785 1 0.0402333736419678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827410 chr11:65827422 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_21244 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65827403-65827449
64251 chr20 30898885 30898885 1 + T C COAD 30898904 + 30898884 30898924 41 TTGCAGAGGAGAAGATGAGGCTGCTGAAGGAGAAAGAGAAA TCGCAGAGGAGAAGATGAGGCTGCTGAAGGAGAAAGAGAAA < 41bp 1 0.509503283050138 1 0.368216991424561 experiment 0.980993433899724 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898904 chr20:30898885 synonymous SNV . 0 2 hm5C_associated_SNPs_21245 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:30898838-30898886
64251 chr7 150765114 150765114 1 + C T COAD 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACGTGGCCTCCCTCTCCTTCCGCAGTCTCTTGGAGCTCCG < 41bp 1 0.525630587876841 1 0.508496642112732 experiment 0.948738824246318 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765114 synonymous SNV . 0 31 hm5C_associated_SNPs_21246 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr7 150765114 150765114 1 + C T COAD 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCTTCCGCAGTCTCTTGGAGCTCCGC < 41bp 1 0.488814112477215 1 0.685255408287048 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765114 synonymous SNV . 0 30 hm5C_associated_SNPs_21247 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr10 94757358 94757358 1 + T C COAD 94757363 + 94757343 94757383 41 AGTTTAACTTAGATGTCATACAGTGTGAATGTAAGTACTAT AGTTTAACTTAGATGCCATACAGTGTGAATGTAAGTACTAT < 41bp 1 0.20934229687425 1 0.141951501369476 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94757363 chr10:94757358 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_21248 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:94757357-94757377
64251 chr22 42273351 42273351 1 + A G COAD 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCGG < 41bp 1 0.232544722911131 1 0.0381689667701721 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273351 nonsynonymous SNV 0.996 0 40 hm5C_associated_SNPs_21249 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42273318-42273368
64251 chr13 111156531 111156531 1 + G A COAD 111156524 + 111156504 111156544 41 GGGCTCCAGGGAAAGCTGGGCCCCAAGGAAGAGGTGGTGTG GGGCTCCAGGGAAAGCTGGGCCCCAAGAAAGAGGTGGTGTG < 41bp 1 0.104832986973733 1 0.163715392351151 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111156524 chr13:111156531 nonsynonymous SNV 0.997 5 28 hm5C_associated_SNPs_21250 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr13:111156531-111156532
64251 chr13 111156531 111156531 1 + G A COAD 111156527 + 111156507 111156547 41 CTCCAGGGAAAGCTGGGCCCCAAGGAAGAGGTGGTGTGTCT CTCCAGGGAAAGCTGGGCCCCAAGAAAGAGGTGGTGTGTCT < 41bp 1 0.366382643377201 1 0.36821186542511 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111156527 chr13:111156531 nonsynonymous SNV 0.997 5 25 hm5C_associated_SNPs_21251 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr13:111156531-111156532
64251 chrX 70344184 70344184 1 + T C COAD 70344193 + 70344173 70344213 41 TTTGATGATCCTGCCGATGACCCAGAGCACAAGGAGGCTGA TTTGATGATCCCGCCGATGACCCAGAGCACAAGGAGGCTGA < 41bp 1 0.400411652983458 1 0.101434111595154 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70344193 chrX:70344184 synonymous SNV . 0 12 hm5C_associated_SNPs_21252 0 0 3 DDX24 POSTAR2 ENCODE chrX:70344176-70344218
64251 chr11 71946463 71946463 1 + C T COAD 71946459 + 71946439 71946479 41 GCTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACC GCTCCATGAAGGTGCGGGTGCCCATGGAGCGCCTGGGCACC < 41bp 1 0.151934482487358 1 0.0787728726863861 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946459 chr11:71946463 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_21253 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946460 + 71946440 71946480 41 CTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCC CTCCATGAAGGTGCGGGTGCCCATGGAGCGCCTGGGCACCC < 41bp 1 0.169982803613556 1 0.0974763035774231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946460 chr11:71946463 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_21254 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946461 + 71946441 71946481 41 TCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCCG TCCATGAAGGTGCGGGTGCCCATGGAGCGCCTGGGCACCCG < 41bp 1 0.687574126205146 1 0.484471380710602 experiment 0.624851747589708 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946461 chr11:71946463 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_21255 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCATGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG < 41bp 1 0.446711642456497 1 0.0574996471405029 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946463 nonsynonymous SNV 0.997 2 8 hm5C_associated_SNPs_21256 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCATGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG < 41bp 1 0.381503080346307 1 0.0913842916488647 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946463 nonsynonymous SNV 0.997 2 6 hm5C_associated_SNPs_21257 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCATGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG < 41bp 1 0.187997047257427 1 0.478575736284256 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946463 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_21258 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946463 71946463 1 + C T COAD 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCATGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG < 41bp 1 0.75846273735803 1 0.536078929901123 experiment 0.48307452528394 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946463 nonsynonymous SNV 0.997 2 4 hm5C_associated_SNPs_21259 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chrX 110951604 110951604 1 + C T COAD 110951614 + 110951594 110951634 41 TTGCCTCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAAC TTGCCTCTTTTGGGCCATTTCGGAGCAGGTAAAAGGAAAAC < 41bp 1 0.738175600327326 1 0.849924564361572 experiment 0.523648799345348 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951614 chrX:110951604 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_21260 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:110951484-110951608
64251 chrX 110951604 110951604 1 + C T COAD 110951619 + 110951599 110951639 41 TCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC TCTTTTGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC < 41bp 1 0.512082480574957 1 0.844595551490784 experiment 0.975835038850087 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951619 chrX:110951604 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_21261 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:110951484-110951608
64251 chr19 47491293 47491293 1 + A G COAD 47491274 + 47491254 47491294 41 ACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTGAGAT ACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTGAGGT < 41bp 1 0.557692493408008 1 0.621991693973541 experiment 0.884615013183983 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491274 chr19:47491293 nonsynonymous SNV 0.993 1 40 hm5C_associated_SNPs_21262 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 47491293 47491293 1 + A G COAD 47491283 + 47491263 47491303 41 ATCTACCGGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCT ATCTACCGGGTCAGCGGGAACAAGTCTGAGGTGGAGAGTCT < 41bp 1 0.333232060282846 1 0.214171260595322 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491283 chr19:47491293 nonsynonymous SNV 0.993 1 31 hm5C_associated_SNPs_21263 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 42856466 42856466 1 + G A COAD 42856468 + 42856448 42856488 41 CCTGCCCGCTGGGCATACGCCCGCTGTCCTGACGTGGATGA CCTGCCCGCTGGGCATACACCCGCTGTCCTGACGTGGATGA < 41bp 1 0.288310841058434 1 0.139083176851273 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42856468 chr19:42856466 nonsynonymous SNV 0.983 3 19 hm5C_associated_SNPs_21264 0 0 1 PRPF8 POSTAR2 ENCODE chr19:42856433-42856508
64251 chr4 88036104 88036104 1 + C T COAD 88036091 + 88036071 88036111 41 GCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC GCGAAGGACAATGTGGAGGACAGGACCCCTGAGTACTTTGC < 41bp 1 0.707162089018083 1 0.441396266222 experiment 0.585675821963834 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036091 chr4:88036104 nonsynonymous SNV 0.871 0 34 hm5C_associated_SNPs_21266 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:88036074-88036104
64251 chr6 44219828 44219828 1 + G A COAD 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTGGTATATATGACCGAGCCCATTGACAAGTACT < 41bp 1 0.310169364321415 1 0.176223248243332 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219828 nonsynonymous SNV 0.981 3 35 hm5C_associated_SNPs_21268 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219828 44219828 1 + G A COAD 44219827 + 44219807 44219847 41 TATATGACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCT TATATGACCGAGCCCATTGACAAGTACTGTGTGCAGCAGCT < 41bp 1 0.607353474663266 1 0.278866142034531 experiment 0.785293050673467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219827 chr6:44219828 nonsynonymous SNV 0.981 3 22 hm5C_associated_SNPs_21269 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219828 44219828 1 + G A COAD 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACCGAGCCCATTGACAAGTACTGTGTGCAGCAGCTCAAGGA < 41bp 1 0.517155841469814 1 0.0437709391117096 experiment 0.965688317060373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219828 nonsynonymous SNV 0.981 3 16 hm5C_associated_SNPs_21270 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219828 44219828 1 + G A COAD 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACAAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT < 41bp 1 0.577618427337151 1 0.167949378490448 experiment 0.844763145325699 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219828 nonsynonymous SNV 0.981 3 9 hm5C_associated_SNPs_21271 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219828 44219828 1 + G A COAD 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACAAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG < 41bp 1 0.754335485204844 1 0.46266707777977 experiment 0.491329029590312 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219828 nonsynonymous SNV 0.981 3 3 hm5C_associated_SNPs_21272 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr19 36229283 36229283 1 + A G COAD 36229279 + 36229259 36229299 41 TCATCAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGTC TCATCAACCACTCCTGTGAGCCCAGCTGCTTCTCTCGGGTC < 41bp 1 0.0671866044702027 1 0.108133405447006 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36229279 chr19:36229283 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_21273 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36229252-36229286
64251 chr1 32691779 32691779 1 + G A COAD 32691784 + 32691764 32691804 41 GACTCCAGGAAAGCAGCTGGCCCTTCTCAAGACCAATTCGG GACTCCAGGAAAGCAACTGGCCCTTCTCAAGACCAATTCGG < 41bp 1 0.136060737607683 1 0.0296127200126648 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3I ENSG00000084623 CDS Human protein_coding chr1:32691784 chr1:32691779 synonymous SNV . 0 16 hm5C_associated_SNPs_21275 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:32691760-32691780
64251 chr7 99702556 99702556 1 + C T COAD 99702547 + 99702527 99702567 41 GAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA GAGATTCGGCTCAAGAGCTTCCTTCCTAGTGGCTCTGGTGA < 41bp 1 0.0174602120797548 1 0.0800391137599945 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702547 chr7:99702556 synonymous SNV . 0 30 hm5C_associated_SNPs_21276 0 0 1 DDX24 POSTAR2 ENCODE chr7:99702504-99702565
64251 chr22 23438376 23438376 1 + C T COAD 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGCGCATCGCCGTAGCTGACTAT < 41bp 1 0.172141018894037 1 0.0332103967666626 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438376 nonsynonymous SNV 0.289 3 31 hm5C_associated_SNPs_21277 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr11 75280000 75280000 1 + C T COAD 75279988 + 75279968 75280008 41 TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGACGA TCCGCTCCTCTCCCAGGCCTCTACAACTACTATGACGACGA < 41bp 1 0.557865083505675 1 0.852529644966125 experiment 0.88426983298865 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279988 chr11:75280000 synonymous SNV . 0 33 hm5C_associated_SNPs_21278 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:75279980-75280000
64251 chr11 75280000 75280000 1 + C T COAD 75280006 + 75279986 75280026 41 CTCTACAACTACTACGACGACGAGAAGGAAAAGCTGCAAAT CTCTACAACTACTATGACGACGAGAAGGAAAAGCTGCAAAT < 41bp 1 0.763368515691037 1 0.552509248256683 experiment 0.473262968617925 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75280006 chr11:75280000 synonymous SNV . 0 15 hm5C_associated_SNPs_21279 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:75279980-75280000
64251 chr15 91035818 91035818 1 + C T COAD 91035817 + 91035797 91035837 41 GTACCGACAGAGGAGAAAGGCCGAACTAGTGAAACTGCAAC GTACCGACAGAGGAGAAAGGCTGAACTAGTGAAACTGCAAC < 41bp 1 0.557911884187812 1 0.233673244714737 experiment 0.884176231624375 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91035817 chr15:91035818 synonymous SNV . 0 22 hm5C_associated_SNPs_21281 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:91035800-91035820
64251 chr16 1825289 1825289 1 + C T COAD 1825308 + 1825288 1825328 41 GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC GTGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC < 41bp 1 0.761135245275972 1 0.276362836360931 experiment 0.477729509448057 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1825308 chr16:1825289 synonymous SNV . 0 2 hm5C_associated_SNPs_21282 0 0 16 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr7 150765102 150765102 1 + T C COAD 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACGTGGCCTCCCTCTCCCTCCGCAGTCTCCTGGAGCTCCG < 41bp 1 0.595423292104976 1 0.553608179092407 experiment 0.809153415790047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765102 nonsynonymous SNV 0.996 2 19 hm5C_associated_SNPs_21283 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150765101-150765102
64251 chr7 150765102 150765102 1 + T C COAD 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCCTCCGCAGTCTCCTGGAGCTCCGC < 41bp 1 0.442074787249162 1 0.760238587856293 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765102 nonsynonymous SNV 0.996 2 18 hm5C_associated_SNPs_21284 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150765101-150765102
64251 chr6 43417214 43417214 1 + C T COAD 43417228 + 43417208 43417248 41 CAGCTGCTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA CAGCTGTTCCAGCAGACCATCTGCAAACGCTTTGCCAACAA < 41bp 1 0.76892379672168 1 0.877745270729065 experiment 0.462152406556641 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43417228 chr6:43417214 nonsynonymous SNV 0.998 4 7 hm5C_associated_SNPs_21290 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43417208-43417238
64251 chrX 105855826 105855826 1 + G A COAD 105855825 + 105855805 105855845 41 AACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGA AACTCCCTTCAGAAATAGAGCACACCAGGAGAAACCAGAGA < 41bp 1 0.20152241386691 1 0.120793581008911 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855825 chrX:105855826 synonymous SNV . 0 22 hm5C_associated_SNPs_21291 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrX 105855826 105855826 1 + G A COAD 105855840 + 105855820 105855860 41 TAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG TAGAGCACACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG < 41bp 1 0.772117983897068 1 0.613276600837708 experiment 0.455764032205864 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855840 chrX:105855826 synonymous SNV . 0 7 hm5C_associated_SNPs_21292 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chr19 17887057 17887057 1 + G A COAD 17887060 + 17887040 17887080 41 CCCACTTTGTCCACAGGGCACCATGAAACGCCATTCTTCAC CCCACTTTGTCCACAGGACACCATGAAACGCCATTCTTCAC < 41bp 1 0.0907364529152056 1 0.0377376675605774 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887060 chr19:17887057 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_21293 0 0 2 PRPF8 POSTAR2 ENCODE chr19:17887023-17887085
64251 chr11 45882569 45882569 1 + C T COAD 45882565 + 45882545 45882585 41 ACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT ACGACGAGACCTACGGCGTGCCCTTCCTGGAGGAGCTGGGT < 41bp 1 0.038091160818984 1 0.0399195849895477 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882565 chr11:45882569 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_21294 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr11 45882569 45882569 1 + C T COAD 45882566 + 45882546 45882586 41 CGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG CGACGAGACCTACGGCGTGCCCTTCCTGGAGGAGCTGGGTG < 41bp 1 0.0187387071984877 1 0.0332096219062805 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882566 chr11:45882569 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_21295 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr19 44732672 44732672 1 + G T COAD 44732653 + 44732633 44732673 41 TCTCCAGGGAGGAACTGCGACTGCTCGATCTTACCCAGAGG TCTCCAGGGAGGAACTGCGACTGCTCGATCTTACCCAGATG < 41bp 1 0.657877746646365 1 0.236258119344711 experiment 0.68424450670727 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44732653 chr19:44732672 nonsynonymous SNV 0.888 2 40 hm5C_associated_SNPs_21296 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:44732659-44732684
64251 chr12 14650704 14650704 1 + C T COAD 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGTGTTCA < 41bp 1 0.629786384310527 1 0.285364985466003 experiment 0.740427231378946 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650704 synonymous SNV . 0 36 hm5C_associated_SNPs_21297 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14650699-14650719
64251 chr11 34129840 34129840 1 + G T COAD 34129843 + 34129823 34129863 41 AGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG AGTAGCTGAGCGGCAAATATCTCTCTTTGTTGTAGTTGGGG < 41bp 1 0.271759313582372 1 0.109573721885681 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129843 chr11:34129840 nonsynonymous SNV 0.994 4 18 hm5C_associated_SNPs_21298 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34129799-34129855
64251 chr15 29385292 29385292 1 + G A COAD 29385286 + 29385266 29385306 41 GCCCTCCTTCAGTTCCAGGGCCCTGCGAACCAGAAGACCTC GCCCTCCTTCAGTTCCAGGGCCCTGCAAACCAGAAGACCTC < 41bp 1 0.0674557265350844 1 0.403642982244492 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient APBA2 ENSG00000034053 CDS Human protein_coding chr15:29385286 chr15:29385292 nonsynonymous SNV 0.986 3 27 hm5C_associated_SNPs_21299 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29385290-29385328
64251 chr15 89169654 89169654 1 + A G COAD 89169639 + 89169619 89169659 41 GGTCCTCCCCACTGCCCACCCCTTTCGGGGCAGCGACAGCA GGTCCTCCCCACTGCCCACCCCTTTCGGGGCAGCGGCAGCA < 41bp 1 0.0477981981988508 1 0.057218998670578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89169639 chr15:89169654 nonsynonymous SNV 0.000 0 36 hm5C_associated_SNPs_21301 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:89169640-89169660
64251 chr17 37650845 37650845 1 + C T COAD 37650826 + 37650806 37650846 41 CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGCCATTCG CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGCCATTTG < 41bp 1 0.0615049326231982 1 0.0350470244884491 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37650826 chr17:37650845 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_21302 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr17:37650839-37650877
64251 chr2 203421084 203421084 1 + G A COAD 203421065 + 203421045 203421085 41 GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCAA < 41bp 1 0.33024295495577 1 0.510963976383209 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203421065 chr2:203421084 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_21305 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:203421060-203421100
64251 chr10 70968411 70968411 1 + G T COAD 70968402 + 70968382 70968422 41 ATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGT ATGCCAGCCTTATTCGAGATCTCCAGAAATAACTAGATGGT < 41bp 1 0.729940923178751 1 0.864943861961365 experiment 0.540118153642498 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968402 chr10:70968411 stopgain 0.993 1 30 hm5C_associated_SNPs_21306 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70968366-70968418
64251 chr5 95091242 95091242 1 + C T COAD 95091260 + 95091240 95091280 41 TGCGCTGTAAGCCATGTTTTCATGCTGCTTTTCAATGTGAA TGTGCTGTAAGCCATGTTTTCATGCTGCTTTTCAATGTGAA < 41bp 1 0.226471486182456 1 0.0877743363380432 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95091260 chr5:95091242 synonymous SNV . 0 3 hm5C_associated_SNPs_21309 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:95091210-95091248
64251 chr1 86047742 86047742 1 + G T COAD 86047751 + 86047731 86047771 41 TGTGTCCCCAAGAACTATCTCTCCCCAACTTGGGCTGTCCC TGTGTCCCCAATAACTATCTCTCCCCAACTTGGGCTGTCCC < 41bp 1 0.317517985152621 1 0.421934574842453 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047751 chr1:86047742 stopgain 1.000 1 12 hm5C_associated_SNPs_21310 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:86047734-86047766
64251 chr1 47838753 47838753 1 + G A COAD 47838752 + 47838732 47838772 41 GGGAAGGCAGATGTATCTTTCGTTCTCTTTTTTGACTGTAA GGGAAGGCAGATGTATCTTTCATTCTCTTTTTTGACTGTAA < 41bp 1 0.120365995108156 1 0.227583110332489 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838752 chr1:47838753 nonsynonymous SNV 0.989 1 22 hm5C_associated_SNPs_21311 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:47838716-47838770
64251 chr5 72192904 72192904 1 + T G COAD 72192921 + 72192901 72192941 41 ATATTCCTATGGTGTTGCACCAGCTTGTAGAAATCATTAAC ATAGTCCTATGGTGTTGCACCAGCTTGTAGAAATCATTAAC < 41bp 1 0.356331978146424 1 0.0981483161449432 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72192921 chr5:72192904 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_21312 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:72192894-72192935
64251 chr3 25542760 25542760 1 + C T COAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATTGATGCCAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.258392889448804 1 0.0941940248012543 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542760 stopgain 1.000 1 10 hm5C_associated_SNPs_21314 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr12 62954478 62954478 1 + G A COAD 62954463 + 62954443 62954483 41 TGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGC TGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAACAGGC < 41bp 1 0.074474255802386 1 0.140418887138367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62954463 chr12:62954478 nonsynonymous SNV 0.957 0 36 hm5C_associated_SNPs_21315 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:62954460-62954480
64251 chr19 1440375 1440375 1 + G A COAD 1440359 + 1440339 1440379 41 CTCCCGCAGCCCGAGATGATCGGCCACTACCTGGGCGAGTT CTCCCGCAGCCCGAGATGATCGGCCACTACCTGGGCAAGTT < 41bp 1 0.619343727402533 1 0.65852963924408 experiment 0.761312545194935 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440359 chr19:1440375 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_21316 0 0 11 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:1440360-1440380
64251 chr2 174224139 174224139 1 + G A COAD 174224138 + 174224118 174224158 41 CCAAGGCCAGATGTCACTAACGAACTGGCCGGTATTTTTCA CCAAGGCCAGATGTCACTAACAAACTGGCCGGTATTTTTCA < 41bp 1 0.290104720876645 1 0.331636011600494 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174224138 chr2:174224139 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_21317 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:174224133-174224179
64251 chr19 47423208 47423208 1 + G A COAD 47423199 + 47423179 47423219 41 ACGAGGCCCACTTAGAGAAGCTGAGGAACGAAAGGAAAAGA ACGAGGCCCACTTAGAGAAGCTGAGGAACAAAAGGAAAAGA < 41bp 1 0.338862960443042 1 0.266340672969818 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423199 chr19:47423208 nonsynonymous SNV 0.956 3 30 hm5C_associated_SNPs_21318 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:47423196-47423210
64251 chr19 47423208 47423208 1 + G A COAD 47423207 + 47423187 47423227 41 CACTTAGAGAAGCTGAGGAACGAAAGGAAAAGAGTTGAGAT CACTTAGAGAAGCTGAGGAACAAAAGGAAAAGAGTTGAGAT < 41bp 1 0.497705897906094 1 0.481351733207703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423207 chr19:47423208 nonsynonymous SNV 0.956 3 22 hm5C_associated_SNPs_21319 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:47423196-47423210
64251 chr11 62655936 62655936 1 + G A COAD 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCACCAC < 41bp 1 0.39923941876713 1 0.177858710289001 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655936 nonsynonymous SNV 0.788 4 37 hm5C_associated_SNPs_21320 0 0 41 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:62655865-62656033
64251 chr19 50880880 50880880 1 + G A COAD 50880899 + 50880879 50880919 41 CGAGTTCCCTGGATACCCCCCTGCCTGGTGAGTGACTCTCT CAAGTTCCCTGGATACCCCCCTGCCTGGTGAGTGACTCTCT < 41bp 1 0.169732604720986 1 0.564473986625671 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50880899 chr19:50880880 synonymous SNV . 0 2 hm5C_associated_SNPs_21322 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50880850-50880888
64251 chr15 64448279 64448279 1 - G T COAD 64448264 - 64448244 64448284 41 GTGATCATCGCAGACTGCGGCAAGATCGAGGTGGAGAAGCC GTGATAATCGCAGACTGCGGCAAGATCGAGGTGGAGAAGCC < 41bp 1 0.74437436451372 1 0.597470045089722 experiment 0.51125127097256 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448264 chr15:64448279 synonymous SNV . 0 6 hm5C_associated_SNPs_21325 0 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448279 64448279 1 - G T COAD 64448270 - 64448250 64448290 41 AAGGATGTGATCATCGCAGACTGCGGCAAGATCGAGGTGGA AAGGATGTGATAATCGCAGACTGCGGCAAGATCGAGGTGGA < 41bp 1 0.683510562815277 1 0.49492484331131 experiment 0.632978874369446 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPIB ENSG00000166794 CDS Human protein_coding chr15:64448270 chr15:64448279 synonymous SNV . 0 12 hm5C_associated_SNPs_21326 0 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448279 64448279 1 - G T COAD 64448276 - 64448256 64448296 41 CCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGATCGA CCCCTGAAGGATGTGATAATCGCAGACTGCGGCAAGATCGA < 41bp 1 0.796977090846774 1 0.571016132831573 experiment 0.406045818306452 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448276 chr15:64448279 synonymous SNV . 0 18 hm5C_associated_SNPs_21327 0 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448279 64448279 1 - G T COAD 64448294 - 64448274 64448314 41 ACAGACAGCCGGGATAAACCCCTGAAGGATGTGATCATCGC ACAGACAGCCGGGATAAACCCCTGAAGGATGTGATAATCGC < 41bp 1 0.576292870098663 1 0.144448757171631 experiment 0.847414259802674 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448294 chr15:64448279 synonymous SNV . 0 36 hm5C_associated_SNPs_21328 0 0 33 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr1 110210762 110210762 1 + A G COAD 110210743 + 110210723 110210763 41 ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTGGAA ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTGGGA < 41bp 1 0.629465081300299 1 0.130838602781296 experiment 0.741069837399402 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110210743 chr1:110210762 nonsynonymous SNV 0.044 0 40 hm5C_associated_SNPs_21329 0 0 2 DDX3X POSTAR2 ENCODE chr1:110210694-110210774
64251 chr7 44741173 44741173 1 + G A COAD 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCACCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC < 41bp 1 0.198264067020326 1 0.533280730247498 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741173 nonsynonymous SNV 0.998 5 3 hm5C_associated_SNPs_21330 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr10 5494322 5494322 1 + C A COAD 5494328 + 5494308 5494348 41 TTTCTTTTTTAAGTCATTTACCCTTCGTGGTGACCACAGAT TTTCTTTTTTAAGTAATTTACCCTTCGTGGTGACCACAGAT < 41bp 1 0.0731852432105732 1 0.0642848014831543 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NET1 ENSG00000173848 CDS Human protein_coding chr10:5494328 chr10:5494322 stopgain 0.998 0 15 hm5C_associated_SNPs_21331 0 0 8 FXR2 POSTAR2 GSE39682,GSM977620 chr10:5494320-5494340
64251 chr6 29911295 29911295 1 + C T COAD 29911277 + 29911257 29911297 41 GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGG GGCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAATGG < 41bp 1 0.545551802394517 1 0.125044256448746 experiment 0.908896395210966 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911277 chr6:29911295 synonymous SNV . 0 39 hm5C_associated_SNPs_21332 0 0 4 RPS3 POSTAR2 ENCODE chr6:29911278-29911321
64251 chr6 29911295 29911295 1 + C T COAD 29911278 + 29911258 29911298 41 GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAACGGG GCACGTGCGTGGAGTGGCTCCGCAGATACCTGGAGAATGGG < 41bp 1 0.403768716019174 1 0.404350399971008 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29911278 chr6:29911295 synonymous SNV . 0 38 hm5C_associated_SNPs_21333 0 0 4 RPS3 POSTAR2 ENCODE chr6:29911278-29911321
64251 chr17 74944092 74944092 1 + G A COAD 74944107 + 74944087 74944127 41 GCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGCCC GCACCAACACCTGCCTGGACCACGGGCTAATCTGTGAGCCC < 41bp 1 0.75184143814139 1 0.805047392845154 experiment 0.496317123717219 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74944107 chr17:74944092 nonsynonymous SNV 0.963 3 6 hm5C_associated_SNPs_21334 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:74944087-74944144
64251 chr8 133855005 133855005 1 + A G COAD 133855017 + 133854997 133855037 41 TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA TCTCGCAGGCCCTGGGAGCTCAGATGATGATGATGTTAGTA < 41bp 1 0.620450167142119 1 0.477499812841415 experiment 0.759099665715762 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133855017 chr8:133855005 nonsynonymous SNV 0.974 1 9 hm5C_associated_SNPs_21336 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133854993-133855045
64251 chr2 233708895 233708895 1 + C T COAD 233708896 + 233708876 233708916 41 GAGATCCAGCAGGAAGAGGCCAGGCAAATGCAAAAGCAGCA GAGATCCAGCAGGAAGAGGTCAGGCAAATGCAAAAGCAGCA < 41bp 1 0.298930393227144 1 0.730758666992188 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233708896 chr2:233708895 nonsynonymous SNV 0.998 1 20 hm5C_associated_SNPs_21337 0 0 3 GRWD1 POSTAR2 ENCODE chr2:233708831-233708943
64251 chr7 36492190 36492190 1 + A C COAD 36492185 + 36492165 36492205 41 CTCTGGCAACCTGATGCTTGCTACAAACCTATTGGAAAGCC CTCTGGCAACCTGATGCTTGCTACACACCTATTGGAAAGCC < 41bp 1 0.544152693656564 1 0.278478860855103 experiment 0.911694612686872 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36492185 chr7:36492190 nonsynonymous SNV 0.952 2 26 hm5C_associated_SNPs_21338 0 0 4 MBNL2 POSTAR2 GSE68890,GSM1685415 chr7:36492180-36492200
64251 chr7 36492190 36492190 1 + A C COAD 36492192 + 36492172 36492212 41 AACCTGATGCTTGCTACAAACCTATTGGAAAGCCTTAAACC AACCTGATGCTTGCTACACACCTATTGGAAAGCCTTAAACC < 41bp 1 0.0867194734808798 1 0.0860513746738434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36492192 chr7:36492190 nonsynonymous SNV 0.952 2 19 hm5C_associated_SNPs_21339 0 0 4 MBNL2 POSTAR2 GSE68890,GSM1685415 chr7:36492180-36492200
64251 chr9 37501727 37501727 1 + C T COAD 37501742 + 37501722 37501762 41 AATTTCGGATTCTATGAAGGCGAAGATTACTGCATATGTGA AATTTTGGATTCTATGAAGGCGAAGATTACTGCATATGTGA < 41bp 1 0.342011760581501 1 0.340872526168823 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37501742 chr9:37501727 nonsynonymous SNV 0.989 4 6 hm5C_associated_SNPs_21340 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:37501716-37501738
64251 chr6 57012762 57012762 1 + T C COAD 57012758 + 57012738 57012778 41 GAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAA GAATATGTAAAACAGCACTGCATGCCTTTGGCAAGCCACAA < 41bp 1 0.04928994890591 1 0.132921516895294 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012758 chr6:57012762 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_21341 0 0 3 EIF3H POSTAR2 ENCODE chr6:57012727-57012770
64251 chr11 82878524 82878524 1 + G A COAD 82878517 + 82878497 82878537 41 ACTTCCTTGTTGTTGTGCATCAAATTCGACAGCTATTTCAG ACTTCCTTGTTGTTGTGCATCAAATTCAACAGCTATTTCAG < 41bp 1 0.299872053813285 1 0.447575628757477 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCF11 ENSG00000165494 CDS Human protein_coding chr11:82878517 chr11:82878524 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_21343 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:82878520-82878540
64251 chr21 30701851 30701851 1 + G A COAD 30701844 + 30701824 30701864 41 ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAG ATGCACAACGGATAATTTCACTGTCTCAAAATGATTTTCAG < 41bp 1 0.162673858083715 1 0.218050301074982 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BACH1 ENSG00000156273 CDS Human protein_coding chr21:30701844 chr21:30701851 nonsynonymous SNV 0.999 5 28 hm5C_associated_SNPs_21344 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30701822-30701863
64251 chr15 99673043 99673043 1 + C T COAD 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGT < 41bp 1 0.213752628669609 1 0.086933970451355 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673043 nonsynonymous SNV 0.000 0 41 hm5C_associated_SNPs_21345 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:99673037-99673064
64251 chr1 93307405 93307405 1 + C T COAD 93307419 + 93307399 93307439 41 CAGGAGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTAT CAGGAGTGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTAT < 41bp 1 0.445526945638644 1 0.169617056846619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL5 ENSG00000122406 CDS Human protein_coding chr1:93307419 chr1:93307405 nonsynonymous SNV 0.998 1 7 hm5C_associated_SNPs_21346 0 0 61 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:93307331-93307473
64251 chr1 6681587 6681587 1 + A T COAD 6681570 + 6681550 6681590 41 CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGTAAT < 41bp 1 0.173325898740973 1 0.258412063121796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681570 chr1:6681587 stopgain 1.000 1 38 hm5C_associated_SNPs_21347 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6681559-6681602
64251 chr18 3457641 3457641 1 + C A COAD 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGAC < 41bp 1 0.649172272614849 1 0.215958327054977 experiment 0.701655454770301 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457641 stopgain 0.999 1 40 hm5C_associated_SNPs_21348 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:3457637-3457666
64251 chr4 110442694 110442694 1 + G A COAD 110442700 + 110442680 110442720 41 TCCAACAGGTGGCCGTGTGTCTGTATTTCAGACACAGTTAC TCCAACAGGTGGCCATGTGTCTGTATTTCAGACACAGTTAC < 41bp 1 0.786074323582439 1 0.582481980323792 experiment 0.427851352835121 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SEC24B ENSG00000138802 CDS Human protein_coding chr4:110442700 chr4:110442694 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_21349 0 0 3 SF3B1 POSTAR2 ENCODE chr4:110442679-110442718
64251 chr6 26205148 26205148 1 + G C COAD 26205141 + 26205121 26205161 41 AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA AGCGATGGATGTGGTCTACGCGCTGAACAGACAGGGACGCA < 41bp 1 0.701678737993718 1 0.305797755718231 experiment 0.596642524012563 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4E ENSG00000198518 CDS Human other chr6:26205141 chr6:26205148 nonsynonymous SNV 0.012 0 28 hm5C_associated_SNPs_21350 0 0 49 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26204840-26205240
64251 chr1 16261135 16261135 1 + G A COAD 16261121 + 16261101 16261141 41 CCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA CCATGCCTGTGATCGACGATCGTCCGGCAGACGCAGGCTCA < 41bp 1 0.148492204606596 1 0.153221040964127 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261121 chr1:16261135 synonymous SNV . 0 35 hm5C_associated_SNPs_21351 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:16261060-16261160
64251 chr7 23207602 23207602 1 + A G COAD 23207600 + 23207580 23207620 41 TGTGGTGGAAGTTTAGGAAACAATGTTTCTGGGAGAGTGCT TGTGGTGGAAGTTTAGGAAACAGTGTTTCTGGGAGAGTGCT < 41bp 1 0.46185139328493 1 0.141606569290161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL7 ENSG00000122550 CDS Human protein_coding chr7:23207600 chr7:23207602 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_21352 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:23207559-23207640
64251 chr10 71243599 71243599 1 + G A COAD 71243594 + 71243574 71243614 41 TGGTCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAAC TGGTCTCCTTCATTGGTGTGCTGGCATCCCTCCGTGACAAC < 41bp 1 0.417669902431523 1 0.121469736099243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243594 chr10:71243599 synonymous SNV . 0 26 hm5C_associated_SNPs_21353 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243599 71243599 1 + G A COAD 71243598 + 71243578 71243618 41 CTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGT CTCCTTCATTGGTGTGCTGGCATCCCTCCGTGACAACCTGT < 41bp 1 0.0913654558452393 1 0.0988269150257111 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243598 chr10:71243599 synonymous SNV . 0 22 hm5C_associated_SNPs_21354 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243599 71243599 1 + G A COAD 71243601 + 71243581 71243621 41 CTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACC CTTCATTGGTGTGCTGGCATCCCTCCGTGACAACCTGTACC < 41bp 1 0.0765823898413094 1 0.362498641014099 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243601 chr10:71243599 synonymous SNV . 0 19 hm5C_associated_SNPs_21355 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243599 71243599 1 + G A COAD 71243606 + 71243586 71243626 41 TTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACCTTCTC TTGGTGTGCTGGCATCCCTCCGTGACAACCTGTACCTTCTC < 41bp 1 0.56807178705772 1 0.400925487279892 experiment 0.86385642588456 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243606 chr10:71243599 synonymous SNV . 0 14 hm5C_associated_SNPs_21356 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr17 66033478 66033478 1 + T C COAD 66033483 + 66033463 66033503 41 CTTTTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAAT CTTTTCTCAAGGAAACGAGGCGTCGCAGAATAGAGGTCAAT < 41bp 1 0.134770477527321 1 0.0992160737514496 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033483 chr17:66033478 nonsynonymous SNV 0.158 1 16 hm5C_associated_SNPs_21357 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:66033460-66033480
64251 chr17 66033478 66033478 1 + T C COAD 66033486 + 66033466 66033506 41 TTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTG TTCTCAAGGAAACGAGGCGTCGCAGAATAGAGGTCAATGTG < 41bp 1 0.684365395600188 1 0.170803755521774 experiment 0.631269208799624 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033486 chr17:66033478 nonsynonymous SNV 0.158 1 13 hm5C_associated_SNPs_21358 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:66033460-66033480
64251 chr17 66033478 66033478 1 + T C COAD 66033488 + 66033468 66033508 41 CTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTGGA CTCAAGGAAACGAGGCGTCGCAGAATAGAGGTCAATGTGGA < 41bp 1 0.731793176242571 1 0.734330952167511 experiment 0.536413647514858 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033488 chr17:66033478 nonsynonymous SNV 0.158 1 11 hm5C_associated_SNPs_21359 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:66033460-66033480
64251 chr16 2569698 2569698 1 + G A COAD 2569701 + 2569681 2569721 41 CTCATCTTCGCCGAGGTGCTCGGCCTCTACGGTCTCATCGT CTCATCTTCGCCGAGGTACTCGGCCTCTACGGTCTCATCGT < 41bp 1 0.60582834722021 1 0.749645292758942 experiment 0.788343305559579 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569701 chr16:2569698 synonymous SNV . 0 18 hm5C_associated_SNPs_21360 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2569660-2569720
64251 chr22 32270370 32270370 1 + G A COAD 32270365 + 32270345 32270385 41 ACGTGGAGGGGATCCAGACACAGGCGATGGCCATTGACATC ACGTGGAGGGGATCCAGACACAGGCAATGGCCATTGACATC < 41bp 1 0.740844423708545 1 0.645016312599182 experiment 0.51831115258291 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32270365 chr22:32270370 synonymous SNV . 0 26 hm5C_associated_SNPs_21361 0 0 1 PRPF8 POSTAR2 ENCODE chr22:32270346-32270429
64251 chr22 24468432 24468432 1 + G A COAD 24468439 + 24468419 24468459 41 CTCTGTGCCACCAGCAGCAGCTCCAAAACCCAGCGGAGGAA CTCTGTGCCACCAACAGCAGCTCCAAAACCCAGCGGAGGAA < 41bp 1 0.351034660799569 1 0.77521687746048 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24468439 chr22:24468432 synonymous SNV . 0 14 hm5C_associated_SNPs_21362 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:24468414-24468443
64251 chr16 700039 700039 1 + G A COAD 700031 + 700011 700051 41 CGTGTATCGCATTCGGGGCTCAGTCTCTGCCGCCAACTACA CGTGTATCGCATTCGGGGCTCAGTCTCTACCGCCAACTACA < 41bp 1 0.0979442396742572 1 0.0280691683292389 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:700031 chr16:700039 nonsynonymous SNV 0.004 3 29 hm5C_associated_SNPs_21363 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:700017-700055
64251 chr15 45353307 45353307 1 + A G COAD 45353327 + 45353307 45353347 41 ATGAATTCTGCAAGATGGGCCGATACAATCTGTCACCTTCC GTGAATTCTGCAAGATGGGCCGATACAATCTGTCACCTTCC < 41bp 1 0.236225221426707 1 0.355215072631836 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SORD ENSG00000140263 CDS Human protein_coding chr15:45353327 chr15:45353307 nonsynonymous SNV 0.415 1 1 hm5C_associated_SNPs_21364 0 0 2 BUD13 POSTAR2 ENCODE chr15:45353257-45353307
64251 chr6 7880269 7880269 1 + G A COAD 7880280 + 7880260 7880300 41 TACTGTGATGGAGAATGCTCCTTCCCACTCAACGCACACAT TACTGTGATAGAGAATGCTCCTTCCCACTCAACGCACACAT < 41bp 1 0.089883274785155 1 0.0498296022415161 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BMP6 ENSG00000153162 CDS Human protein_coding chr6:7880280 chr6:7880269 nonsynonymous SNV 0.998 5 10 hm5C_associated_SNPs_21365 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7880237-7880276
64251 chr1 164790828 164790828 1 + G A COAD 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAGACAGGAGGATACAGTGATGGACTCACAGCCAG < 41bp 1 0.670259164635937 1 0.204720765352249 experiment 0.659481670728125 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790828 nonsynonymous SNV 1.000 0 34 hm5C_associated_SNPs_21370 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr4 128748511 128748511 1 + A C COAD 128748508 + 128748488 128748528 41 ACATGGAGCATGAAGAGAGACCAAAAGCCTTAAATGACTTG ACATGGAGCATGAAGAGAGACCACAAGCCTTAAATGACTTG < 41bp 1 0.379256072446809 1 0.136954247951508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128748508 chr4:128748511 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_21371 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:128748500-128748520
64251 chr11 70260753 70260753 1 + G T COAD 70260737 + 70260717 70260757 41 TTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCA TTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTTATCA < 41bp 1 0.693447750202371 1 0.306219875812531 experiment 0.613104499595259 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70260737 chr11:70260753 nonsynonymous SNV 0.996 4 37 hm5C_associated_SNPs_21372 0 0 9 BUD13 POSTAR2 ENCODE chr11:70260705-70260768
64251 chr13 77570183 77570183 1 + C T COAD 77570189 + 77570169 77570209 41 TGGTGTAATCAAGGCGCTGCCTGCTTTTTTGAGGGAATTGA TGGTGTAATCAAGGTGCTGCCTGCTTTTTTGAGGGAATTGA < 41bp 1 0.651604195493075 1 0.152753949165344 experiment 0.696791609013849 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570189 chr13:77570183 synonymous SNV . 0 15 hm5C_associated_SNPs_21373 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr13:77570178-77570245
64251 chr16 77232125 77232125 1 + C T COAD 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTTGTTACCCA < 41bp 1 0.540688638284933 1 0.167564749717712 experiment 0.918622723430133 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232125 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_21374 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:77232115-77232172
64251 chr2 159477782 159477782 1 + C T COAD 159477801 + 159477781 159477821 41 TCTTATTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCA TTTTATTCCGACAGTGGATACCAGGAAGCAGGGAGTTTCCA < 41bp 1 0.233070440879627 1 0.0879938006401062 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKP4 ENSG00000144283 CDS Human protein_coding chr2:159477801 chr2:159477782 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_21375 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:159477761-159477794
64251 chr22 29439408 29439408 1 + G A COAD 29439389 + 29439369 29439409 41 TCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACCGC TCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACCAC < 41bp 1 0.334407915862384 1 0.387622058391571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29439389 chr22:29439408 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_21376 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:29439379-29439476
64251 chr1 117641458 117641458 1 + T G COAD 117641459 + 117641439 117641479 41 AGCTGTCTTCTAACAGGAATCCATCACTTGAAGATCAAGCT AGCTGTCTTCTAACAGGAAGCCATCACTTGAAGATCAAGCT < 41bp 1 0.0186149500051744 1 0.289916455745697 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117641459 chr1:117641458 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_21377 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117641455-117641478
64251 chr3 155628663 155628663 1 + T C COAD 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGCC < 41bp 1 0.503719480381879 1 0.409269988536835 experiment 0.992561039236243 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628663 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_21378 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:155628581-155628664
64251 chr6 42986629 42986629 1 + G A COAD 42986648 + 42986628 42986668 41 CGAAGGGGAAGGGGCCATGTCCCCGCCGGCGCCAGTGCTGC CAAAGGGGAAGGGGCCATGTCCCCGCCGGCGCCAGTGCTGC < 41bp 1 0.457488561118072 1 0.621697247028351 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42986648 chr6:42986629 synonymous SNV . 0 2 hm5C_associated_SNPs_21379 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr6:42986622-42986675
64251 chr1 33138398 33138398 1 + C A COAD 33138407 + 33138387 33138427 41 TTCAGTTTATTCATGGTGGTCATACTGCCAAGATATCTGAT TTCAGTTTATTAATGGTGGTCATACTGCCAAGATATCTGAT < 41bp 1 0.0516718574101557 1 0.14948832988739 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBBP4 ENSG00000162521 CDS Human protein_coding chr1:33138407 chr1:33138398 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_21380 0 0 39 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:33138391-33138413
64251 chr8 143782022 143782022 1 + G A COAD 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACCTGACTGCGAGACAACAAGATCCAGAGGACTCC < 41bp 1 0.757555294653415 1 0.0523216724395752 experiment 0.484889410693169 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782022 nonsynonymous SNV 0.150 0 25 hm5C_associated_SNPs_21382 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:143782001-143782039
64251 chr9 88571307 88571307 1 + C T COAD 88571292 + 88571272 88571312 41 TAGAATTAAAGTTGGGAGAACTACTTCATGATAAGCTGTAA TAGAATTAAAGTTGGGAGAACTACTTCATGATAAGTTGTAA < 41bp 1 0.0712114269660352 1 0.304441571235657 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAA35 ENSG00000135040 CDS Human protein_coding chr9:88571292 chr9:88571307 synonymous SNV . 0 36 hm5C_associated_SNPs_21383 0 0 2 DDX24 POSTAR2 ENCODE chr9:88571275-88571310
64251 chr1 24022315 24022315 1 + G A COAD 24022327 + 24022307 24022347 41 TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG TCAGCATCACAGACAAGAAGCGCAGGACAGGCTGCATTGGG < 41bp 1 0.718261366884751 1 0.393714636564255 experiment 0.563477266230497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022327 chr1:24022315 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_21384 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:24022108-24022375
64251 chr12 57167928 57167928 1 + A G COAD 57167934 + 57167914 57167954 41 CTACTCAGTGGGTGAAGGAGCATGTGGGGGACAGAGGTATG CTACTCAGTGGGTGGAGGAGCATGTGGGGGACAGAGGTATG < 41bp 1 0.501064625438892 1 0.358309298753738 experiment 0.997870749122216 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57167934 chr12:57167928 nonsynonymous SNV 0.989 1 15 hm5C_associated_SNPs_21385 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:57167919-57167947
64251 chr10 128817067 128817067 1 + G A COAD 128817082 + 128817062 128817102 41 GGCTCGAAAAACAGGGTTTCCGGAGATAATCATGCCTGGTA GGCTCAAAAAACAGGGTTTCCGGAGATAATCATGCCTGGTA < 41bp 1 0.493770442002837 1 0.88224995136261 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128817082 chr10:128817067 nonsynonymous SNV 0.697 4 6 hm5C_associated_SNPs_21386 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:128817057-128817084
64251 chr7 4796811 4796811 1 + T C COAD 4796801 + 4796781 4796821 41 TCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCAAGGTA TCCTGCTTCCGCACCCCCTTCGGGCCTCTGCCCTCAAGGTA < 41bp 1 0.409005192162172 1 0.830329060554504 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796801 chr7:4796811 nonsynonymous SNV 0.988 5 31 hm5C_associated_SNPs_21387 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:4796810-4796831
64251 chr11 45882547 45882547 1 + G A COAD 45882565 + 45882545 45882585 41 ACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT ACAACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT < 41bp 1 0.0256035043286811 1 0.0481784641742706 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882565 chr11:45882547 nonsynonymous SNV 0.087 1 3 hm5C_associated_SNPs_21388 0 0 3 GRWD1 POSTAR2 ENCODE chr11:45882466-45882594
64251 chr11 45882547 45882547 1 + G A COAD 45882566 + 45882546 45882586 41 CGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG CAACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG < 41bp 1 0.0402020467821302 1 0.0525535345077515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882566 chr11:45882547 nonsynonymous SNV 0.087 1 2 hm5C_associated_SNPs_21389 0 0 3 GRWD1 POSTAR2 ENCODE chr11:45882466-45882594
64251 chr16 70509330 70509330 1 + C A COAD 70509347 + 70509327 70509367 41 CTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTG CTGATCCGCACCTTCGGGGGCGGCTTTGAGCTGCACACCTG < 41bp 1 0.409813762528256 1 0.392835170030594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70509347 chr16:70509330 nonsynonymous SNV 0.168 1 4 hm5C_associated_SNPs_21396 0 0 2 DDX24 POSTAR2 ENCODE chr16:70509291-70509335
64251 chr10 124813266 124813266 1 + C T COAD 124813278 + 124813258 124813298 41 AAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGGA AAGCATATTGATGCAGAATACTGACGTCTATAGGAGTGGGA < 41bp 1 0.377766868261077 1 0.158118188381195 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ACADSB ENSG00000196177 CDS Human protein_coding chr10:124813278 chr10:124813266 synonymous SNV . 0 9 hm5C_associated_SNPs_21397 0 0 1 DGCR8 POSTAR2 ENCODE chr10:124813258-124813301
64251 chr11 74329760 74329760 1 + G T COAD 74329746 + 74329726 74329766 41 ACCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTA ACCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAATGAATTA < 41bp 1 0.498722671193798 1 0.248010694980621 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329746 chr11:74329760 stopgain 1.000 1 35 hm5C_associated_SNPs_21398 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:74329760-74329780
64251 chr11 74329760 74329760 1 + G T COAD 74329747 + 74329727 74329767 41 CCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTAT CCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAATGAATTAT < 41bp 1 0.247732443200171 1 0.152605295181274 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329747 chr11:74329760 stopgain 1.000 1 34 hm5C_associated_SNPs_21399 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:74329760-74329780
64251 chr11 74329760 74329760 1 + G T COAD 74329751 + 74329731 74329771 41 CATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTATGGGA CATCCAAGCAGGTTTCCCAGCAGCCCAAATGAATTATGGGA < 41bp 1 0.29664619415106 1 0.561517417430878 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329751 chr11:74329760 stopgain 1.000 1 30 hm5C_associated_SNPs_21400 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:74329760-74329780
64251 chr11 74329760 74329760 1 + G T COAD 74329754 + 74329734 74329774 41 CCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTATGGGAATG CCAAGCAGGTTTCCCAGCAGCCCAAATGAATTATGGGAATG < 41bp 1 0.506821091204581 1 0.151649385690689 experiment 0.986357817590839 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329754 chr11:74329760 stopgain 1.000 1 27 hm5C_associated_SNPs_21401 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:74329760-74329780
64251 chr15 31197927 31197927 1 + G A COAD 31197933 + 31197913 31197953 41 TGATATCCCTCACAGCATTCCTTTGGAGCAGGGGTCAAGCT TGATATCCCTCACAACATTCCTTTGGAGCAGGGGTCAAGCT < 41bp 1 0.293045491755173 1 0.0918174386024475 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197933 chr15:31197927 nonsynonymous SNV 0.008 0 15 hm5C_associated_SNPs_21403 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:31197906-31197932
64251 chr2 48027747 48027747 1 + G T COAD 48027758 + 48027738 48027778 41 AGGGATCATGGAAGAAGTTGCTGATGGTTTTAAGTCTAAAA AGGGATCATTGAAGAAGTTGCTGATGGTTTTAAGTCTAAAA < 41bp 1 0.238620084497011 1 0.043866366147995 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48027758 chr2:48027747 nonsynonymous SNV 0.731 2 10 hm5C_associated_SNPs_21404 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027684-48027770
64251 chr4 141300287 141300287 1 + G T COAD 141300277 + 141300257 141300297 41 GAATTTTTCTTATTGTAGACCATTCCTCAAGAATTTTGTAT GAATTTTTCTTATTGTAGACCATTCCTCAATAATTTTGTAT < 41bp 1 0.0210917555982419 1 0.0381871461868286 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCOC ENSG00000153130 CDS Human protein_coding chr4:141300277 chr4:141300287 nonsynonymous SNV 0.018 2 31 hm5C_associated_SNPs_21405 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:141300274-141300294
64251 chr9 5747485 5747485 1 + C T COAD 5747494 + 5747474 5747514 41 TACTTGGACATCGGCATTGGCATGTTGTACAGGTAAATCTT TACTTGGACATTGGCATTGGCATGTTGTACAGGTAAATCTT < 41bp 1 0.203750178307961 1 0.210411131381989 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIC1 ENSG00000107036 CDS Human protein_coding chr9:5747494 chr9:5747485 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_21406 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr9:5747468-5747497
64251 chr3 63965705 63965705 1 + G A COAD 63965690 + 63965670 63965710 41 CAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTTCTT CAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCATTCTT < 41bp 1 0.348593262676667 1 0.591541707515717 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63965690 chr3:63965705 nonsynonymous SNV 0.993 2 36 hm5C_associated_SNPs_21407 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:63965704-63965705
64251 chr4 144336797 144336797 1 + A C COAD 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTGACAACAGCTACATTTTTGATATCAACAC < 41bp 1 0.596118141700797 1 0.27788770198822 experiment 0.807763716598406 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336797 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_21408 0 0 1 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chr19 42406145 42406145 1 + A G COAD 42406149 + 42406129 42406169 41 TTGGAGGAGCTGCAGAACATCTTCCCCAGCCTGGACGAGCT TTGGAGGAGCTGCAGAGCATCTTCCCCAGCCTGGACGAGCT < 41bp 1 0.107134821286807 1 0.194925397634506 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42406149 chr19:42406145 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_21410 0 0 4 FXR2 POSTAR2 ENCODE chr19:42406127-42406182
64251 chr3 50091793 50091793 1 + G A COAD 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCACCAATCTTCCTGTTCATTCTGCAAGAACCCAAGAG < 41bp 1 0.0479286480601481 1 0.0196280181407928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091793 nonsynonymous SNV 0.983 0 9 hm5C_associated_SNPs_21412 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:50091779-50091805
64251 chr21 34925265 34925265 1 + A C COAD 34925277 + 34925257 34925297 41 AGTATCAGAGGCTGCTGTGACTGTTCCAGAACCACCACCAG AGTATCAGCGGCTGCTGTGACTGTTCCAGAACCACCACCAG < 41bp 1 0.291514771736773 1 0.69576370716095 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925277 chr21:34925265 nonsynonymous SNV 0.989 4 9 hm5C_associated_SNPs_21413 0 0 37 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34925134-34925350
64251 chr3 141644455 141644455 1 + A C COAD 141644475 + 141644455 141644495 41 AGATTGATGGATCAGCCAACCTAAAAAGTCAGGATGATCGT CGATTGATGGATCAGCCAACCTAAAAAGTCAGGATGATCGT < 41bp 1 0.687961553581538 1 0.4543417096138 experiment 0.624076892836923 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141644475 chr3:141644455 nonsynonymous SNV 0.885 3 1 hm5C_associated_SNPs_21414 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141644411-141644540
64251 chr6 87967471 87967471 1 + T G COAD 87967481 + 87967461 87967501 41 GATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC GATGGGAAATGTATCTGTAGCAGGTGTTACAGGGCTTTTAC < 41bp 1 0.642876384889837 1 0.80269193649292 experiment 0.714247230220326 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87967481 chr6:87967471 nonsynonymous SNV 0.997 4 11 hm5C_associated_SNPs_21415 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:87967449-87967477
64251 chr19 54969677 54969677 1 + C T COAD 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCGCAAGGTTGCCCTCAAGGCCATGATCAAAAC < 41bp 1 0.18046639622833 1 0.210039585828781 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969677 synonymous SNV . 0 18 hm5C_associated_SNPs_21416 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr11 35640759 35640759 1 + C A COAD 35640777 + 35640757 35640797 41 GGCCCTGTCTTACTATCTGGCGCGCCTGCTGGGCCTCCAGC GGACCTGTCTTACTATCTGGCGCGCCTGCTGGGCCTCCAGC < 41bp 1 0.358301458722012 1 0.12658154964447 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FJX1 ENSG00000179431 CDS Human protein_coding chr11:35640777 chr11:35640759 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_21417 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:35640759-35640780
64251 chr12 62931429 62931429 1 + G A COAD 62931443 + 62931423 62931463 41 CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC CTTGGCACATTGCCATGGGGCTGTTCTTGGAACATCATGGC < 41bp 1 0.162876678537092 1 0.0297220945358276 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62931443 chr12:62931429 synonymous SNV . 0 7 hm5C_associated_SNPs_21418 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:62931396-62931430
64251 chr4 76720859 76720859 1 + C A COAD 76720851 + 76720831 76720871 41 CAATTGTCCCATTGCAGTAACGCATTTTCTTCACAATTCAG CAATTGTCCCATTGCAGTAACGCATTTTATTCACAATTCAG < 41bp 1 0.191044083381172 1 0.0612104535102844 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76720851 chr4:76720859 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_21440 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr4:76720844-76720876
64251 chr19 14512311 14512311 1 + C A COAD 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATAATGAGGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.238606467521177 1 0.0483613014221191 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512311 synonymous SNV . 0 12 hm5C_associated_SNPs_21441 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:14512311-14512312
64251 chr13 52293466 52293466 1 + C T COAD 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGCGCCTGGGAGGTTATCGGACCAGTGTTGTGGCCTCA < 41bp 1 0.477549305770621 1 0.901172637939453 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293466 nonsynonymous SNV 0.988 2 31 hm5C_associated_SNPs_21442 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:52293456-52293486
64251 chr8 124219663 124219663 1 + G A COAD 124219661 + 124219641 124219681 41 GCAGGCAGCCACCCCGGTACCCGAAGTGTGTCCGCGTCTTC GCAGGCAGCCACCCCGGTACCCAAAGTGTGTCCGCGTCTTC < 41bp 1 0.675944745764501 1 0.208119720220566 experiment 0.648110508470998 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM83A ENSG00000147689 CDS Human protein_coding chr8:124219661 chr8:124219663 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_21443 0 0 4 IGF2BP1 POSTAR2 ENCODE chr8:124219613-124219669
64251 chr4 42024887 42024887 1 + G A COAD 42024868 + 42024848 42024888 41 TCTCTAGTGATCTAGAACAACTTCGAAAAATCAGACGACGA TCTCTAGTGATCTAGAACAACTTCGAAAAATCAGACGACAA < 41bp 1 0.372640638154111 1 0.267078638076782 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42024868 chr4:42024887 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_21444 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:42024887-42024901
64251 chr5 33466980 33466980 1 + G A COAD 33466993 + 33466973 33467013 41 TAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA TAGGTACAACAACAATTCCACGATGCCAAATTCATGGCAGA < 41bp 1 0.145515982548766 1 0.105035245418549 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33466993 chr5:33466980 nonsynonymous SNV 0.997 1 8 hm5C_associated_SNPs_21445 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33466955-33467001
64251 chr10 91532533 91532533 1 + A G COAD 91532517 + 91532497 91532537 41 CAAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAAACGG CAAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAGACGG < 41bp 1 0.304553285375495 1 0.503808438777924 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91532517 chr10:91532533 nonsynonymous SNV 0.991 3 37 hm5C_associated_SNPs_21446 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:91532513-91532545
64251 chr21 45736396 45736396 1 + G A COAD 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCAACCGGA < 41bp 1 0.374553897094168 1 0.336008489131927 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736396 nonsynonymous SNV 0.662 5 35 hm5C_associated_SNPs_21447 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736396 45736396 1 + G A COAD 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCAACCGGATC < 41bp 1 0.0847944129907426 1 0.119255483150482 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736396 nonsynonymous SNV 0.662 5 33 hm5C_associated_SNPs_21448 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736396 45736396 1 + G A COAD 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCAACCGGATCC < 41bp 1 0.0801170541311789 1 0.06883904337883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736396 nonsynonymous SNV 0.662 5 32 hm5C_associated_SNPs_21449 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736396 45736396 1 + G A COAD 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGACGCCCTCTGCCTTCAACCGGATCCT < 41bp 1 0.408520049874708 1 0.291873931884766 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736396 nonsynonymous SNV 0.662 5 31 hm5C_associated_SNPs_21450 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr2 45879498 45879498 1 + G A COAD 45879512 + 45879492 45879532 41 CACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTG CACGATACCCCCATAGGCTACGACGACTTCGTGGCCAACTG < 41bp 1 0.318347492929677 1 0.168233394622803 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCE ENSG00000171132 CDS Human protein_coding chr2:45879512 chr2:45879498 nonsynonymous SNV 0.998 1 7 hm5C_associated_SNPs_21451 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:45879480-45879500
64251 chr4 154318411 154318411 1 + G A COAD 154318425 + 154318405 154318445 41 CACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA CACTTCAAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA < 41bp 1 0.300892452089389 1 0.281884759664536 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MND1 ENSG00000121211 CDS Human protein_coding chr4:154318425 chr4:154318411 nonsynonymous SNV 0.855 0 7 hm5C_associated_SNPs_21452 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:154318392-154318416
64251 chr3 127786399 127786399 1 + T C COAD 127786410 + 127786390 127786430 41 ATGCTGGGCTCCTGTGCATTCTTCTCCAAAACGTGGATTGA ATGCTGGGCCCCTGTGCATTCTTCTCCAAAACGTGGATTGA < 41bp 1 0.264825056023607 1 0.381560742855072 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786410 chr3:127786399 nonsynonymous SNV 0.876 2 10 hm5C_associated_SNPs_21454 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:127786373-127786445
64251 chr1 93988962 93988962 1 + C T COAD 93988959 + 93988939 93988979 41 AGTTAAATGACTATGCAGGACAGCGAGAAGTTGTAGCAGAA AGTTAAATGACTATGCAGGACAGTGAGAAGTTGTAGCAGAA < 41bp 1 0.360565272173362 1 0.165816247463226 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:93988959 chr1:93988962 stopgain 1.000 1 24 hm5C_associated_SNPs_21455 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:93988935-93988991
64251 chr5 179137044 179137044 1 + G T COAD 179137028 + 179137008 179137048 41 GCCAGATGCAGATCTGAAGACCTATTTTACTGATAAGAAAA GCCAGATGCAGATCTGAAGACCTATTTTACTGATAATAAAA < 41bp 1 0.0600962736739053 1 0.0819166600704193 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179137028 chr5:179137044 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_21456 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:179137039-179137061
64251 chr2 192141729 192141729 1 + G A COAD 192141711 + 192141691 192141731 41 GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAA GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAAAA < 41bp 1 0.365217392209723 1 0.124571055173874 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141711 chr2:192141729 synonymous SNV . 0 39 hm5C_associated_SNPs_21457 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:192141718-192141748
64251 chr1 70700410 70700410 1 + C G COAD 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CACTGGCTGCTTTGGGGGGTCCTACTCTTGATCCTGCCCTT < 41bp 1 0.281157820406932 1 0.130056172609329 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700410 nonsynonymous SNV 0.998 1 19 hm5C_associated_SNPs_21459 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:70700376-70700412
64251 chr2 32640462 32640462 1 + G A COAD 32640443 + 32640423 32640463 41 TCAGCAATTTGCAGATGCAGCAGCCAACCTTACCTCTCCGG TCAGCAATTTGCAGATGCAGCAGCCAACCTTACCTCTCCAG < 41bp 1 0.117324098307564 1 0.775798916816711 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640443 chr2:32640462 synonymous SNV . 0 40 hm5C_associated_SNPs_21460 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:32640439-32640469
64251 chrX 64956698 64956698 1 + A G COAD 64956685 + 64956665 64956705 41 TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAGAAGGAG TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGGGAAGGAG < 41bp 1 0.58178139500506 1 0.563531279563904 experiment 0.83643720998988 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956685 chrX:64956698 nonsynonymous SNV 0.998 3 34 hm5C_associated_SNPs_21462 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956698 64956698 1 + A G COAD 64956695 + 64956675 64956715 41 GAAGAAGAAGCGTGAAATGGCAGAGAAGGAGAAAGAGAAGA GAAGAAGAAGCGTGAAATGGCAGGGAAGGAGAAAGAGAAGA < 41bp 1 0.748846314132169 1 0.646152555942535 experiment 0.502307371735661 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956695 chrX:64956698 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_21463 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chr3 9489384 9489384 1 + A C COAD 9489393 + 9489373 9489413 41 ATTGCTGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA ATTGCTGCAGACAAACTAGTCCCCAAGCCACCTCCAGCAAA < 41bp 1 0.542962418640555 1 0.113795667886734 experiment 0.91407516271889 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9489393 chr3:9489384 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_21464 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221667 chr3:9489380-9489420
64251 chr11 73068164 73068164 1 + G A COAD 73068165 + 73068145 73068185 41 AAGTCAGGCTCCCTGCGGCGCAGCTCCATGAGCCTGTGAGT AAGTCAGGCTCCCTGCGGCACAGCTCCATGAGCCTGTGAGT < 41bp 1 0.129506441828612 1 0.0574177801609039 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73068165 chr11:73068164 nonsynonymous SNV 0.999 4 20 hm5C_associated_SNPs_21465 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73068081-73068182
64251 chr1 171519335 171519335 1 + T C COAD 171519315 + 171519295 171519335 41 TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTT TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTC < 41bp 1 0.10057368256707 1 0.741185307502747 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171519315 chr1:171519335 synonymous SNV . 0 41 hm5C_associated_SNPs_21466 0 0 31 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:171519316-171519337
64251 chr1 114450784 114450784 1 + G A COAD 114450803 + 114450783 114450823 41 CGAAAACACCCACAACATAACATAAAGATTGGTGAGTTGTT CAAAAACACCCACAACATAACATAAAGATTGGTGAGTTGTT < 41bp 1 0.28761102348387 1 0.0924536287784576 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114450803 chr1:114450784 nonsynonymous SNV 0.914 0 2 hm5C_associated_SNPs_21470 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:114450784-114450809
64251 chr6 151671598 151671598 1 + G T COAD 151671614 + 151671594 151671634 41 AAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGG AAAATAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGG < 41bp 1 0.0334998351866181 1 0.0979918837547302 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671614 chr6:151671598 nonsynonymous SNV 0.962 4 5 hm5C_associated_SNPs_21472 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151671572-151671607
64251 chr7 139094363 139094363 1 + G T COAD 139094348 + 139094328 139094368 41 AGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG AGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGATAAGAG < 41bp 1 0.506929175665854 1 0.351795077323914 experiment 0.986141648668291 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094348 chr7:139094363 stopgain 1.000 1 36 hm5C_associated_SNPs_21473 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139094334-139094397
64251 chr7 139094363 139094363 1 + G T COAD 139094351 + 139094331 139094371 41 AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA AGAAAAGAAACCAGGAACGGCTGAAACGAAGATAAGAGAGA < 41bp 1 0.52678348837188 1 0.438538461923599 experiment 0.94643302325624 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094351 chr7:139094363 stopgain 1.000 1 33 hm5C_associated_SNPs_21474 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139094334-139094397
64251 chr7 139094363 139094363 1 + G T COAD 139094357 + 139094337 139094377 41 GAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGAGAGAGA GAAACCAGGAACGGCTGAAACGAAGATAAGAGAGAGAGAGA < 41bp 1 0.673133203753169 1 0.698159396648407 experiment 0.653733592493663 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094357 chr7:139094363 stopgain 1.000 1 27 hm5C_associated_SNPs_21475 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139094334-139094397
64251 chr1 242030149 242030149 1 + T C COAD 242030150 + 242030130 242030170 41 AGCCTGCCCATTCAAGAAGTCATAGTTGGGATGACAAAACA AGCCTGCCCATTCAAGAAGCCATAGTTGGGATGACAAAACA < 41bp 1 0.195544424405565 1 0.0657819211483002 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242030150 chr1:242030149 synonymous SNV . 0 20 hm5C_associated_SNPs_21477 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:242030140-242030160
64251 chr2 32800267 32800267 1 + G A COAD 32800281 + 32800261 32800301 41 CTGCTGGAATTGCTTCGGGCCATTGCTTCTTGTGCTGCCAT CTGCTGAAATTGCTTCGGGCCATTGCTTCTTGTGCTGCCAT < 41bp 1 0.0379342771466209 1 0.122171849012375 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32800281 chr2:32800267 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_21479 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32800249-32800281
64251 chr20 31021610 31021610 1 + G A COAD 31021621 + 31021601 31021641 41 TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC TCCTTTCCCAAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC < 41bp 1 0.128894105335494 1 0.216788083314896 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021621 chr20:31021610 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_21482 0 0 13 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:31021580-31021620
64251 chr5 130726772 130726772 1 + G A COAD 130726785 + 130726765 130726805 41 TGGATACGAAGGCGGGATAGCCCTGGTCCTTTCTCCAGTGA TGGATACAAAGGCGGGATAGCCCTGGTCCTTTCTCCAGTGA < 41bp 1 0.521209314156956 1 0.119771957397461 experiment 0.957581371686088 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130726785 chr5:130726772 synonymous SNV . 0 8 hm5C_associated_SNPs_21483 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:130726762-130726800
64251 chr1 168014214 168014214 1 + T C COAD 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TTGATCGCTCCTGTGGGGTTCCAGAAGAATCTGCTTCATCT < 41bp 1 0.39582916803499 1 0.474137127399445 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014214 synonymous SNV . 0 11 hm5C_associated_SNPs_21485 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:168014200-168014220
64251 chr18 48604717 48604717 1 + C G COAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCTGGGGACCGGATTAGCCAAGACAGAGCA < 41bp 1 0.482256560135884 1 0.632801651954651 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604717 stopgain 1.000 1 28 hm5C_associated_SNPs_21486 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:48604684-48604726
64251 chr18 2751361 2751361 1 + G A COAD 2751377 + 2751357 2751397 41 AGCTGTCTACCAGTGGGAACCGACCCCCAGCAAATGTGAGT AGCTATCTACCAGTGGGAACCGACCCCCAGCAAATGTGAGT < 41bp 1 0.146025089404906 1 0.466603130102158 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2751377 chr18:2751361 synonymous SNV . 0 5 hm5C_associated_SNPs_21487 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:2751346-2751369
64251 chr16 81053826 81053826 1 + C T COAD 81053845 + 81053825 81053865 41 CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC CTGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC < 41bp 1 0.78697458256576 1 0.919452786445618 experiment 0.42605083486848 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPN ENSG00000166451 CDS Human protein_coding chr16:81053845 chr16:81053826 nonsynonymous SNV 0.106 3 2 hm5C_associated_SNPs_21488 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:81053814-81053828
64251 chr12 110457028 110457028 1 + G A COAD 110457008 + 110456988 110457028 41 GTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCG GTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCA < 41bp 1 0.0139172734935249 1 0.0654219686985016 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110457008 chr12:110457028 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_21490 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr12:110457019-110457047
64251 chr1 230379147 230379147 1 + G A COAD 230379152 + 230379132 230379172 41 AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA AATGAGCACTGGCTGAAGCCCCTCCTGGAAAGGGTGGCGGA < 41bp 1 0.0719049641685656 1 0.098885178565979 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230379152 chr1:230379147 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_21491 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:230379147-230379171
64251 chr7 98563390 98563390 1 + C T COAD 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATGAGCATGGAGATGTGGAAGAACTT < 41bp 1 0.162231347450355 1 0.385553896427155 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563390 nonsynonymous SNV 0.998 4 31 hm5C_associated_SNPs_21492 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr7:98563380-98563400
64251 chr6 144782343 144782343 1 + C T COAD 144782344 + 144782324 144782364 41 AATAAACAGAACTGAAGGGCCAACCTGGACATGCATATCTG AATAAACAGAACTGAAGGGTCAACCTGGACATGCATATCTG < 41bp 1 0.0498264360246731 1 0.112891912460327 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144782344 chr6:144782343 synonymous SNV . 0 20 hm5C_associated_SNPs_21493 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:144782335-144782373
64251 chr14 39649837 39649837 1 + A C COAD 39649851 + 39649831 39649871 41 ACAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGG ACAAGACGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGG < 41bp 1 0.672150389730877 1 0.347870141267776 experiment 0.655699220538247 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649851 chr14:39649837 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_21496 0 0 27 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr14:39649820-39649840
64251 chr14 39649837 39649837 1 + A C COAD 39649853 + 39649833 39649873 41 AAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGGAG AAGACGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGGAG < 41bp 1 0.794185127136999 1 0.610540091991425 experiment 0.411629745726003 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649853 chr14:39649837 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_21497 0 0 27 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr14:39649820-39649840
64251 chr7 158734631 158734631 1 + G A COAD 158734618 + 158734598 158734638 41 CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGACGGAAGCAT CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGACAGAAGCAT < 41bp 1 0.443266236086719 1 0.43527352809906 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158734618 chr7:158734631 nonsynonymous SNV 0.026 4 34 hm5C_associated_SNPs_21498 0 0 2 DDX24 POSTAR2 ENCODE chr7:158734617-158734637
64251 chr7 72409179 72409179 1 + C A COAD 72409185 + 72409165 72409205 41 TCTAGCCCAGCCTCCTCCCGCTCCCAGACACCGGAGAGGCC TCTAGCCCAGCCTCATCCCGCTCCCAGACACCGGAGAGGCC < 41bp 1 0.0965145675504916 1 0.153634399175644 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POM121 ENSG00000196313 CDS Human protein_coding chr7:72409185 chr7:72409179 synonymous SNV . 0 15 hm5C_associated_SNPs_21499 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:72409151-72409183
64251 chr11 129996702 129996702 1 + C T COAD 129996707 + 129996687 129996727 41 GAGCAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGT GAGCAGCTGGAGATTTGGCACCGCAACCGAATGGACAGGGT < 41bp 1 0.4721625311838 1 0.315239191055298 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996707 chr11:129996702 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_21502 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr11 129996702 129996702 1 + C T COAD 129996710 + 129996690 129996730 41 CAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGTAAA CAGCTGGAGATTTGGCACCGCAACCGAATGGACAGGGTAAA < 41bp 1 0.158220643360101 1 0.0993850231170654 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996710 chr11:129996702 nonsynonymous SNV 0.997 4 13 hm5C_associated_SNPs_21503 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr1 26142147 26142147 1 + G A COAD 26142138 + 26142118 26142158 41 TCTCATCCACCTTTGAAGACCCGTCCACGGCCACCTACATG TCTCATCCACCTTTGAAGACCCGTCCACGACCACCTACATG < 41bp 1 0.0276709906392301 1 0.22122249007225 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26142138 chr1:26142147 nonsynonymous SNV 0.993 2 30 hm5C_associated_SNPs_21504 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26142115-26142147
64251 chr12 6979509 6979509 1 + A G COAD 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGTGGTGCTTCCCTCGAGCCCGAATTCGTGG < 41bp 1 0.177062532904147 1 0.0461088120937347 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979509 nonsynonymous SNV 0.996 2 26 hm5C_associated_SNPs_21505 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr12 6979509 6979509 1 + A G COAD 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGTGGTGCTTCCCTCGAGCCCGAATTCGTGGACAT < 41bp 1 0.657611457973428 1 0.798855781555176 experiment 0.684777084053145 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979509 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_21506 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr17 33324842 33324842 1 + A G COAD 33324843 + 33324823 33324863 41 CTCAGAAATGAAGCGAGTCACAGTAAGTGAAGACCCTATGC CTCAGAAATGAAGCGAGTCGCAGTAAGTGAAGACCCTATGC < 41bp 1 0.619106891285323 1 0.683338522911072 experiment 0.761786217429354 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33324843 chr17:33324842 nonsynonymous SNV 0.931 0 20 hm5C_associated_SNPs_21509 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:33324799-33324842
64251 chr8 100182331 100182331 1 + C A COAD 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACAAGTTATTCCCTCTTTCAGC < 41bp 1 0.163975989043413 1 0.155690491199493 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182331 nonsynonymous SNV 0.988 2 22 hm5C_associated_SNPs_21510 0 0 1 EIF3D POSTAR2 ENCODE chr8:100182316-100182392
64251 chr4 1206094 1206094 1 - G A COAD 1206086 - 1206066 1206106 41 CCACCCGCCCCACGCCCCTTCTCCTGGCCAAACCGTCAAGC CCACCCGCCCCATGCCCCTTCTCCTGGCCAAACCGTCAAGC < 41bp 1 0.475420266364958 1 0.396892547607422 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206086 chr4:1206094 synonymous SNV . 0 13 hm5C_associated_SNPs_21511 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:1206030-1206095
64251 chr19 39950201 39950201 1 + A T COAD 39950216 + 39950196 39950236 41 TAGGGATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTG TAGGGTTCCCAATCTGTGGACTGTCAAATGTAAGGTATGTG < 41bp 1 0.0314546931305208 1 0.0857913196086884 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950216 chr19:39950201 nonsynonymous SNV 0.965 4 6 hm5C_associated_SNPs_21513 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr19 39950201 39950201 1 + A T COAD 39950220 + 39950200 39950240 41 GATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTGCTCT GTTCCCAATCTGTGGACTGTCAAATGTAAGGTATGTGCTCT < 41bp 1 0.43282125474412 1 0.820258498191833 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950220 chr19:39950201 nonsynonymous SNV 0.965 4 2 hm5C_associated_SNPs_21514 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr22 29695770 29695770 1 + G C COAD 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGCCCCCCTGGACCTTTGATGGAACAGATGGGAG < 41bp 1 0.405065926262223 1 0.147102952003479 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695770 synonymous SNV . 0 10 hm5C_associated_SNPs_21515 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr1 36026197 36026197 1 + C T COAD 36026179 + 36026159 36026199 41 TCCTCACAGCCCGGGGGGACCCGGACGATGCTGCCCGCCGC TCCTCACAGCCCGGGGGGACCCGGACGATGCTGCCCGCTGC < 41bp 1 0.739100491325385 1 0.845167756080627 experiment 0.521799017349229 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026179 chr1:36026197 nonsynonymous SNV 0.998 1 39 hm5C_associated_SNPs_21517 0 0 2 RBM15 POSTAR2 ENCODE chr1:36026151-36026199
64251 chr6 84629139 84629139 1 + C A COAD 84629154 + 84629134 84629174 41 AGACTCTTTAGTCACCATTGCCATATATACTAAACAGAAGG AGACTATTTAGTCACCATTGCCATATATACTAAACAGAAGG < 41bp 1 0.104734648244769 1 0.509474754333496 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84629154 chr6:84629139 nonsynonymous SNV 0.962 1 6 hm5C_associated_SNPs_21518 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:84629129-84629151
64251 chr14 102502958 102502958 1 + C T COAD 102502965 + 102502945 102502985 41 GTGCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGT GTGCACTGAGATTTGGTAACCCCCTTCTGGTCCAGGTTGGT < 41bp 1 0.0362114391661291 1 0.0564897656440735 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502965 chr14:102502958 synonymous SNV . 0 14 hm5C_associated_SNPs_21519 1 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr14 102502958 102502958 1 + C T COAD 102502967 + 102502947 102502987 41 GCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGTGT GCACTGAGATTTGGTAACCCCCTTCTGGTCCAGGTTGGTGT < 41bp 1 0.00915632850289631 1 0.0286121666431427 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502967 chr14:102502958 synonymous SNV . 0 12 hm5C_associated_SNPs_21520 1 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr2 64112917 64112917 1 + C T COAD 64112920 + 64112900 64112940 41 CATAGATAATCTGGGTGCCACAGTGGATCTGTATATTCTTA CATAGATAATCTGGGTGTCACAGTGGATCTGTATATTCTTA < 41bp 1 0.506445269316435 1 0.694002330303192 experiment 0.987109461367129 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UGP2 ENSG00000169764 CDS Human protein_coding chr2:64112920 chr2:64112917 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_21521 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:64112886-64112926
64251 chr6 158900912 158900912 1 + G A COAD 158900920 + 158900900 158900940 41 CAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGT CAGCAGGCCATCACCAGCACCTTGCGTGAGGACAAGGACGT < 41bp 1 0.139918051620846 1 0.125069707632065 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158900920 chr6:158900912 nonsynonymous SNV 0.995 2 13 hm5C_associated_SNPs_21522 0 0 5 BUD13 POSTAR2 ENCODE chr6:158900761-158900915
64251 chr3 127325561 127325561 1 + C T COAD 127325576 + 127325556 127325596 41 AATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA AATTTTGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA < 41bp 1 0.518765879867231 1 0.661551833152771 experiment 0.962468240265538 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325576 chr3:127325561 synonymous SNV . 0 6 hm5C_associated_SNPs_21524 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:127325535-127325573
64251 chr2 233681635 233681635 1 + C T COAD 233681615 + 233681595 233681635 41 AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGC AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGT < 41bp 1 0.238218319615128 1 0.418687343597412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681615 chr2:233681635 stopgain 1.000 1 41 hm5C_associated_SNPs_21527 0 0 12 BUD13 POSTAR2 ENCODE chr2:233681570-233681695
64251 chr1 161761932 161761932 1 + A C COAD 161761929 + 161761909 161761949 41 TCCAGAAAATGGACTGACTCCAAAGAAAAAAATTCAGGTGA TCCAGAAAATGGACTGACTCCAACGAAAAAAATTCAGGTGA < 41bp 1 0.492026231367015 1 0.670128166675568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161761929 chr1:161761932 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_21529 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161761913-161761933
64251 chr4 170616794 170616794 1 + C A COAD 170616800 + 170616780 170616820 41 AGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAG AGCTGCAGGGGTTTATGTAGCTTTTGGTGCACCAATTGGAG < 41bp 1 0.129121638119174 1 0.0768114328384399 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170616800 chr4:170616794 nonsynonymous SNV 0.997 5 15 hm5C_associated_SNPs_21531 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:170616760-170616802
64251 chr10 93695422 93695422 1 + G A COAD 93695421 + 93695401 93695441 41 TTTGTTATTTCAGGCTAGATCGCCTTTTTATTTTACTGGAT TTTGTTATTTCAGGCTAGATCACCTTTTTATTTTACTGGAT < 41bp 1 0.400826848188061 1 0.460180133581161 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93695421 chr10:93695422 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_21535 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:93695414-93695441
64251 chr17 71232497 71232497 1 + C A COAD 71232491 + 71232471 71232511 41 ATGAGCTCATTAGGTAAAATCCAAGTCATGGAGAAACAAGA ATGAGCTCATTAGGTAAAATCCAAGTAATGGAGAAACAAGA < 41bp 1 0.201386261208024 1 0.15519642829895 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232491 chr17:71232497 synonymous SNV . 0 27 hm5C_associated_SNPs_21537 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232486-71232497
64251 chr22 39125532 39125532 1 + G A COAD 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCGACAAAAAAGGGCCCCCTGACGAAACGAGACGA < 41bp 1 0.0363771630558176 1 0.130174160003662 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125532 synonymous SNV . 0 12 hm5C_associated_SNPs_21552 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125532 39125532 1 + G A COAD 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCGACAAAAAAGGGCCCCCTGACGAAACGAGACGAG < 41bp 1 0.0503607832783514 1 0.227067023515701 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125532 synonymous SNV . 0 11 hm5C_associated_SNPs_21553 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125532 39125532 1 + G A COAD 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCGACAAAAAAGGGCCCCCTGACGAAACGAGACGAGG < 41bp 1 0.0207330194252621 1 0.135247617959976 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125532 synonymous SNV . 0 10 hm5C_associated_SNPs_21554 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125532 39125532 1 + G A COAD 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCGACAAAAAAGGGCCCCCTGACGAAACGAGACGAGGG < 41bp 1 0.0648919872149775 1 0.199277728796005 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125532 synonymous SNV . 0 9 hm5C_associated_SNPs_21555 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125532 39125532 1 + G A COAD 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCGACAAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG < 41bp 1 0.146438003005078 1 0.358564674854279 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125532 synonymous SNV . 0 8 hm5C_associated_SNPs_21556 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr5 139908590 139908590 1 + C A COAD 139908572 + 139908552 139908592 41 TACTTCTCAAGCACAGCTTTCTTCACAAAAGATGGAGTCTT TACTTCTCAAGCACAGCTTTCTTCACAAAAGATGGAGTATT < 41bp 1 0.170795121267156 1 0.141955614089966 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139908572 chr5:139908590 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_21557 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:139908560-139908600
64251 chr1 16255105 16255105 1 + G T COAD 16255107 + 16255087 16255127 41 CTATACAAAAAATGAAAAGACAGATAAAGAACGAACTTTTG CTATACAAAAAATGAAAATACAGATAAAGAACGAACTTTTG < 41bp 1 0.195989318347319 1 0.388528227806091 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255107 chr1:16255105 nonsynonymous SNV 0.999 3 19 hm5C_associated_SNPs_21558 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr1 16255105 16255105 1 + G T COAD 16255122 + 16255102 16255142 41 AAAGACAGATAAAGAACGAACTTTTGATCCGGAGAGAGTGG AAATACAGATAAAGAACGAACTTTTGATCCGGAGAGAGTGG < 41bp 1 0.0244053390570756 1 0.0598344206809998 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255122 chr1:16255105 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_21559 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr2 136511744 136511744 1 + T C COAD 136511732 + 136511712 136511752 41 TTCATTAAACTGTACAGATCCTGTAGTGTGTGTTCCATCCA TTCATTAAACTGTACAGATCCTGTAGTGTGTGCTCCATCCA < 41bp 1 0.55190152932167 1 0.100958079099655 experiment 0.89619694135666 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136511732 chr2:136511744 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_21560 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:136511622-136511775
64251 chr2 97007521 97007521 1 + A C COAD 97007527 + 97007507 97007547 41 CCCAGTCCTCGAAGACTTTCCTCAGAATGACGATGAGAAGG CCCAGTCCTCGAAGCCTTTCCTCAGAATGACGATGAGAAGG < 41bp 1 0.597947410156787 1 0.660038471221924 experiment 0.804105179686426 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007527 chr2:97007521 nonsynonymous SNV 0.999 1 15 hm5C_associated_SNPs_21561 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:97007501-97007528
64251 chr12 13232899 13232899 1 + C T COAD 13232896 + 13232876 13232916 41 CCAAAATTGGCCGTGGGGAGCTGCGAAGATTTCTCTCTAGG CCAAAATTGGCCGTGGGGAGCTGTGAAGATTTCTCTCTAGG < 41bp 1 0.314202467918896 1 0.110538274049759 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234B ENSG00000084444 CDS Human protein_coding chr12:13232896 chr12:13232899 stopgain 1.000 0 24 hm5C_associated_SNPs_21563 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334287 chr12:13232880-13232900
64251 chr6 149730820 149730820 1 + C T COAD 149730822 + 149730802 149730842 41 AACCATCCAGCCTTAATTCGCTGTGAACAGTGTGAGATGCC AACCATCCAGCCTTAATTTGCTGTGAACAGTGTGAGATGCC < 41bp 1 0.369157259892381 1 0.291173219680786 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TAB2 ENSG00000055208 CDS Human protein_coding chr6:149730822 chr6:149730820 nonsynonymous SNV 0.999 4 19 hm5C_associated_SNPs_21564 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:149730786-149730855
64251 chr1 100480953 100480953 1 + A G COAD 100480954 + 100480934 100480974 41 TCAGGGATATAACCGACTGACCTGGATAGTAGTTGTTCTTC TCAGGGATATAACCGACTGGCCTGGATAGTAGTTGTTCTTC < 41bp 1 0.233606102241822 1 0.0483535528182983 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC35A3 ENSG00000117620 CDS Human protein_coding chr1:100480954 chr1:100480953 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_21565 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:100480933-100480967
64251 chr9 132630298 132630298 1 + C T COAD 132630317 + 132630297 132630337 41 TCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAG TTCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAG < 41bp 1 0.373384221366782 1 0.548511803150177 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132630317 chr9:132630298 synonymous SNV . 0 2 hm5C_associated_SNPs_21566 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:132630286-132630314
64251 chr12 65082107 65082107 1 + A C COAD 65082124 + 65082104 65082144 41 ATGAATACACTTCATATCAGCAGCACAAACACTGTCGGGGA ATGCATACACTTCATATCAGCAGCACAAACACTGTCGGGGA < 41bp 1 0.749400425418924 1 0.434095740318298 experiment 0.501199149162152 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RASSF3 ENSG00000153179 CDS Human protein_coding chr12:65082124 chr12:65082107 nonsynonymous SNV 0.944 4 4 hm5C_associated_SNPs_21567 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr12:65082093-65082123
64251 chr1 35879610 35879610 1 + C A COAD 35879615 + 35879595 35879635 41 TAGATAACATTTTTACTGAGCCCTATTCCAGATTTATGATT TAGATAACATTTTTAATGAGCCCTATTCCAGATTTATGATT < 41bp 1 0.0857613876704323 1 0.0244598686695099 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35879615 chr1:35879610 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_21568 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35879586-35879674
64251 chr1 35879610 35879610 1 + C A COAD 35879623 + 35879603 35879643 41 ATTTTTACTGAGCCCTATTCCAGATTTATGATTGAACTTAC ATTTTTAATGAGCCCTATTCCAGATTTATGATTGAACTTAC < 41bp 1 0.377902347243603 1 0.531129539012909 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35879623 chr1:35879610 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_21569 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35879586-35879674
64251 chr7 157000225 157000225 1 + G A COAD 157000240 + 157000220 157000260 41 ATAACGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT ATAACAAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT < 41bp 1 0.0411053864421985 1 0.155094742774963 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157000240 chr7:157000225 nonsynonymous SNV 0.890 4 6 hm5C_associated_SNPs_21572 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr7:157000154-157000246
64251 chr19 4475344 4475344 1 + G A COAD 4475343 + 4475323 4475363 41 ATCTTTTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTC ATCTTTTTCTTTGGCACACACAAAACGTAAGTGTCCCCTTC < 41bp 1 0.480809858789227 1 0.384396404027939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475343 chr19:4475344 nonsynonymous SNV 0.986 3 22 hm5C_associated_SNPs_21577 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:4475316-4475344
64251 chr19 4475344 4475344 1 + G A COAD 4475348 + 4475328 4475368 41 TTTCTTTGGCACACACGAAACGTAAGTGTCCCCTTCTGGGG TTTCTTTGGCACACACAAAACGTAAGTGTCCCCTTCTGGGG < 41bp 1 0.49662579349439 1 0.179060399532318 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4475348 chr19:4475344 nonsynonymous SNV 0.986 3 17 hm5C_associated_SNPs_21578 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:4475316-4475344
64251 chr7 114655785 114655785 1 + C T COAD 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTATCCTGGCTTGCTTGTTCTGCGAATTTCTGACCCTTTG < 41bp 1 0.743915385159424 1 0.339720547199249 experiment 0.512169229681152 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655785 synonymous SNV . 0 30 hm5C_associated_SNPs_21579 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:114655753-114655788
64251 chr12 62938732 62938732 1 + T C COAD 62938730 + 62938710 62938750 41 ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGAT ATGGGGAGCAGAAGCTTTAACTCCTCTTATTAAAGCAGGAT < 41bp 1 0.418214214331502 1 0.480733633041382 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62938730 chr12:62938732 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_21580 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:62938723-62938744
64251 chr10 114918433 114918433 1 + C T COAD 114918428 + 114918408 114918448 41 TTTGTTCTTTTTTTTCAGAACACAGCGAATGTTTCCTAAAT TTTGTTCTTTTTTTTCAGAACACAGTGAATGTTTCCTAAAT < 41bp 1 0.331625231175118 1 0.167408108711243 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114918428 chr10:114918433 synonymous SNV . 0 26 hm5C_associated_SNPs_21581 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr10:114918413-114918434
64251 chr5 169018104 169018104 1 + G A COAD 169018123 + 169018103 169018143 41 CGAATGTTAGAAAGTTTGAGCTGCGAATGTGAAGCTATTAA CAAATGTTAGAAAGTTTGAGCTGCGAATGTGAAGCTATTAA < 41bp 1 0.391981409342244 1 0.147227019071579 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018123 chr5:169018104 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_21582 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:169018099-169018127
64251 chr5 56526785 56526785 1 + G A COAD 56526784 + 56526764 56526804 41 GCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAAAATT GCTTTGATTCTGCTATTGGGCATCCTAATGGAGGTAAAATT < 41bp 1 0.173895391090825 1 0.0663838982582092 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526784 chr5:56526785 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_21583 0 0 1 GRWD1 POSTAR2 ENCODE chr5:56526751-56526799
64251 chr10 5963497 5963497 1 + G A COAD 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT CGGGTGACGAAAGGGGAATTCCCTTCAAGGATACATTTGAT < 41bp 1 0.0854712638380611 1 0.229276478290558 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963497 nonsynonymous SNV 0.775 1 10 hm5C_associated_SNPs_21585 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr10 5963497 5963497 1 + G A COAD 5963513 + 5963493 5963533 41 GACGGAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG GACGAAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG < 41bp 1 0.643172066618687 1 0.819425642490387 experiment 0.713655866762625 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963513 chr10:5963497 nonsynonymous SNV 0.775 1 5 hm5C_associated_SNPs_21586 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr19 44515258 44515258 1 + G A COAD 44515278 + 44515258 44515298 41 GAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT AAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT < 41bp 1 0.259726021779472 1 0.0492107272148132 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515278 chr19:44515258 nonsynonymous SNV 0.001 2 1 hm5C_associated_SNPs_21587 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515256-44515280
64251 chr1 173454561 173454561 1 + A G COAD 173454543 + 173454523 173454563 41 AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATA AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGGTA < 41bp 1 0.0809931435682452 1 0.019411712884903 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454543 chr1:173454561 nonsynonymous SNV 0.787 3 39 hm5C_associated_SNPs_21588 0 0 20 RTCB POSTAR2 GSE38201,GSM936508 chr1:173454542-173454568
64251 chr2 235951000 235951000 1 + C T COAD 235950995 + 235950975 235951015 41 TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAGGCCC TGCAGCTGTGGGGGAAGCACCAGTTTGTTTTGTCCAGGCCC < 41bp 1 0.291372505229443 1 0.710992038249969 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950995 chr2:235951000 synonymous SNV . 0 26 hm5C_associated_SNPs_21589 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235951000-235951029
64251 chr8 23147914 23147914 1 + G A COAD 23147913 + 23147893 23147933 41 GTGGCAGAGGAGGAAGAGGACGAAGAGGAGGTGGAAGAGGA GTGGCAGAGGAGGAAGAGGACAAAGAGGAGGTGGAAGAGGA < 41bp 1 0.574448707368536 1 0.560296058654785 experiment 0.851102585262928 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147913 chr8:23147914 nonsynonymous SNV 0.021 0 22 hm5C_associated_SNPs_21590 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr8:23147914-23147915
64251 chr7 73604164 73604164 1 + C T COAD 73604152 + 73604132 73604172 41 TATTTTCCCTTTATCATTAGCTGTTGGGCGATCGGTCACTT TATTTTCCCTTTATCATTAGCTGTTGGGCGATTGGTCACTT < 41bp 1 0.213310766100287 1 0.0206409990787506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4H ENSG00000106682 CDS Human protein_coding chr7:73604152 chr7:73604164 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_21592 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:73604143-73604181
64251 chr19 5144306 5144306 1 + G T COAD 5144297 + 5144277 5144317 41 GTGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGG GTGTCCCTAGGCCAGGTGGTCATCACCAATAACCGCAACGG < 41bp 1 0.338057643397298 1 0.170823186635971 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5144297 chr19:5144306 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_21593 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:5144300-5144320
64251 chr15 64410415 64410415 1 + C A COAD 64410406 + 64410386 64410426 41 TTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC TTCTCTTCCTCCTCAGGAAGCCACAAATTATTCGAAGCCCC < 41bp 1 0.229509661369647 1 0.254152685403824 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410406 chr15:64410415 nonsynonymous SNV 0.955 0 30 hm5C_associated_SNPs_21595 0 0 3 CDC40 POSTAR2 ENCODE chr15:64410415-64410526
64251 chr15 64410415 64410415 1 + C A COAD 64410409 + 64410389 64410429 41 TCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGC TCTTCCTCCTCAGGAAGCCACAAATTATTCGAAGCCCCAGC < 41bp 1 0.20053575623685 1 0.242576569318771 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410409 chr15:64410415 nonsynonymous SNV 0.955 0 27 hm5C_associated_SNPs_21596 0 0 3 CDC40 POSTAR2 ENCODE chr15:64410415-64410526
64251 chr14 74424903 74424903 1 + C T COAD 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC TCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC < 41bp 1 0.408302598707614 1 0.188233017921448 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424903 nonsynonymous SNV 0.990 0 1 hm5C_associated_SNPs_21597 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:74424902-74424934
64251 chr2 54858671 54858671 1 + A C COAD 54858664 + 54858644 54858684 41 CTCCACAAGATGTGGGAGAACAGACAAAATCTCCTATCCCA CTCCACAAGATGTGGGAGAACAGACAACATCTCCTATCCCA < 41bp 1 0.300117871075326 1 0.474072575569153 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858664 chr2:54858671 nonsynonymous SNV 0.787 0 28 hm5C_associated_SNPs_21599 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:54858662-54858685
64251 chr20 42089365 42089365 1 + C T COAD 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGCGGAGCAAAGGTTGATCACGTTCTCG < 41bp 1 0.45328343861816 1 0.383377909660339 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089365 stopgain 1.000 1 28 hm5C_associated_SNPs_21600 0 0 10 EFTUD2 POSTAR2 ENCODE chr20:42089287-42089372
64251 chr9 117053105 117053105 1 + G A COAD 117053104 + 117053084 117053124 41 TAACAGGGGGAGCAGGGAGACGATGGGGACCCTGGCCCCAT TAACAGGGGGAGCAGGGAGACAATGGGGACCCTGGCCCCAT < 41bp 1 0.333354340578629 1 0.691415011882782 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117053104 chr9:117053105 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_21601 0 0 10 BUD13 POSTAR2 ENCODE chr9:117053089-117053128
64251 chr10 112270105 112270105 1 + C T COAD 112270091 + 112270071 112270111 41 GACATGCAGGGTGCCTACTGCACATTCCCTGCCTCGGTGCT GACATGCAGGGTGCCTACTGCACATTCCCTGCCTTGGTGCT < 41bp 1 0.223009977994121 1 0.170750051736832 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DUSP5 ENSG00000138166 CDS Human protein_coding chr10:112270091 chr10:112270105 nonsynonymous SNV 0.996 4 35 hm5C_associated_SNPs_21602 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr10:112270105-112270106
64251 chr12 104332151 104332151 1 + G A COAD 104332136 + 104332116 104332156 41 AGACTGAAACTGTTGAGGAGCCCATGGAGGAAGAAGAAGCA AGACTGAAACTGTTGAGGAGCCCATGGAGGAAGAAAAAGCA < 41bp 1 0.101965929190679 1 0.14827099442482 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104332136 chr12:104332151 nonsynonymous SNV 0.996 1 36 hm5C_associated_SNPs_21603 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:104332119-104332223
64251 chr19 10403702 10403702 1 + C T COAD 10403699 + 10403679 10403719 41 CCCCGGCTAGACGATTCGGACTGCCCCAGGAGTTGGACGTG CCCCGGCTAGACGATTCGGACTGTCCCAGGAGTTGGACGTG < 41bp 1 0.133522716038837 1 0.0788630843162537 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10403699 chr19:10403702 synonymous SNV . 0 24 hm5C_associated_SNPs_21605 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10403673-10403702
64251 chr16 88643534 88643534 1 + G A COAD 88643520 + 88643500 88643540 41 GTATTCTCTCTTTTGCAGAACCGTGGGTACCGATGGATGTG GTATTCTCTCTTTTGCAGAACCGTGGGTACCGATAGATGTG < 41bp 1 0.21234396149141 1 0.109518229961395 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88643520 chr16:88643534 nonsynonymous SNV 0.990 2 35 hm5C_associated_SNPs_21606 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:88643512-88643555
64251 chr16 88643534 88643534 1 + G A COAD 88643521 + 88643501 88643541 41 TATTCTCTCTTTTGCAGAACCGTGGGTACCGATGGATGTGG TATTCTCTCTTTTGCAGAACCGTGGGTACCGATAGATGTGG < 41bp 1 0.551928489070201 1 0.405803978443146 experiment 0.896143021859597 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H18 ENSG00000158545 CDS Human protein_coding chr16:88643521 chr16:88643534 nonsynonymous SNV 0.990 2 34 hm5C_associated_SNPs_21607 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:88643512-88643555
64251 chr18 33780032 33780032 1 + C T COAD 33780019 + 33779999 33780039 41 AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGG AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCATGCCTGGG < 41bp 1 0.65911322469168 1 0.0671519935131073 experiment 0.68177355061664 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780019 chr18:33780032 nonsynonymous SNV 0.000 1 34 hm5C_associated_SNPs_21608 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780032 33780032 1 + C T COAD 33780021 + 33780001 33780041 41 GTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAA GTCAAGTCTGGGCGGTTGCACCCTGTGAGCATGCCTGGGAA < 41bp 1 0.456301938276154 1 0.0601776242256165 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780021 chr18:33780032 nonsynonymous SNV 0.000 1 32 hm5C_associated_SNPs_21609 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780032 33780032 1 + C T COAD 33780022 + 33780002 33780042 41 TCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAG TCAAGTCTGGGCGGTTGCACCCTGTGAGCATGCCTGGGAAG < 41bp 1 0.361295966908658 1 0.307314455509186 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780022 chr18:33780032 nonsynonymous SNV 0.000 1 31 hm5C_associated_SNPs_21610 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780032 33780032 1 + C T COAD 33780023 + 33780003 33780043 41 CAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAGT CAAGTCTGGGCGGTTGCACCCTGTGAGCATGCCTGGGAAGT < 41bp 1 0.552068638452905 1 0.0797742009162903 experiment 0.89586272309419 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780023 chr18:33780032 nonsynonymous SNV 0.000 1 30 hm5C_associated_SNPs_21611 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr11 118344458 118344458 1 + C T COAD 118344450 + 118344430 118344470 41 CAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACA CAAGGCCCCCGAGGAGCTGTCCAAAGATTGAGATGCTGACA < 41bp 1 0.1567093490501 1 0.159219413995743 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344450 chr11:118344458 stopgain 1.000 0 29 hm5C_associated_SNPs_21612 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr11 118344458 118344458 1 + C T COAD 118344469 + 118344449 118344489 41 TCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAA TCCAAAGATTGAGATGCTGACAAGAGCGTGGAGAAGGACAA < 41bp 1 0.528883768229084 1 0.522908389568329 experiment 0.942232463541832 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344469 chr11:118344458 stopgain 1.000 0 10 hm5C_associated_SNPs_21613 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr11 118344458 118344458 1 + C T COAD 118344475 + 118344455 118344495 41 GATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAG GATTGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAG < 41bp 1 0.259092461233583 1 0.531518220901489 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344475 chr11:118344458 stopgain 1.000 0 4 hm5C_associated_SNPs_21614 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr2 11922443 11922443 1 + G A COAD 11922463 + 11922443 11922483 41 GCCAACTCTGGTCGGTGGGGCACTTTTGGACCAGAACAAGC ACCAACTCTGGTCGGTGGGGCACTTTTGGACCAGAACAAGC < 41bp 1 0.101514833700952 1 0.168658405542374 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LPIN1 ENSG00000134324 CDS Human protein_coding chr2:11922463 chr2:11922443 synonymous SNV . 0 1 hm5C_associated_SNPs_21616 0 0 1 UCHL5 POSTAR2 ENCODE chr2:11922429-11922474
64251 chr10 91177163 91177163 1 + C T COAD 91177165 + 91177145 91177185 41 AAAAGGCCAAAATAAAGACGCCCTTGAGTGCTTGGAACAAG AAAAGGCCAAAATAAAGATGCCCTTGAGTGCTTGGAACAAG < 41bp 1 0.0778548851698659 1 0.0457316339015961 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91177165 chr10:91177163 synonymous SNV . 0 19 hm5C_associated_SNPs_21617 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:91177159-91177178
64251 chr15 72855816 72855816 1 + C T COAD 72855834 + 72855814 72855854 41 TTCGCTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT TTTGCTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT < 41bp 1 0.0770976338492111 1 0.15314045548439 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72855834 chr15:72855816 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_21619 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr15:72855786-72855837
64251 chr16 27642469 27642469 1 + C T COAD 27642481 + 27642461 27642501 41 TCCAGCGCCGAGGATGGCACCAGGTCTGGAGACTGTGGCCC TCCAGCGCTGAGGATGGCACCAGGTCTGGAGACTGTGGCCC < 41bp 1 0.605877694950461 1 0.405539870262146 experiment 0.788244610099078 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27642481 chr16:27642469 stopgain 0.999 1 9 hm5C_associated_SNPs_21620 0 0 2 BUD13 POSTAR2 ENCODE chr16:27642402-27642489
64251 chr18 8638248 8638248 1 + C T COAD 8638254 + 8638234 8638274 41 CCAAGACCACATGTCCGATGCTGTTGATTTCCTACTTTGGA CCAAGACCACATGTTCGATGCTGTTGATTTCCTACTTTGGA < 41bp 1 0.187639003135528 1 0.100950390100479 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB12 ENSG00000206418 CDS Human protein_coding chr18:8638254 chr18:8638248 synonymous SNV . 0 15 hm5C_associated_SNPs_21622 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:8638240-8638260
64251 chr16 22337251 22337251 1 + C T COAD 22337234 + 22337214 22337254 41 GTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAG GTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGTGAG < 41bp 1 0.466359756989025 1 0.168596565723419 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337234 chr16:22337251 synonymous SNV . 0 38 hm5C_associated_SNPs_21623 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:22337251-22337252
64251 chr16 22337251 22337251 1 + C T COAD 22337235 + 22337215 22337255 41 TGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGG TGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGTGAGG < 41bp 1 0.291429428921301 1 0.442187309265137 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337235 chr16:22337251 synonymous SNV . 0 37 hm5C_associated_SNPs_21624 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:22337251-22337252
64251 chr21 37785221 37785221 1 + C T COAD 37785214 + 37785194 37785234 41 TGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCAT TGCCTTCCTGGCCATTTCTTCCACGGATGGTTACTGCTCAT < 41bp 1 0.340324242988301 1 0.209428578615189 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785214 chr21:37785221 synonymous SNV . 0 28 hm5C_associated_SNPs_21625 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr21:37785206-37785222
64251 chr9 137021685 137021685 1 + G C COAD 137021694 + 137021674 137021714 41 TTCAGACGAAAGAGATTGTACAGAAACTACAAGGCCACACA TTCAGACGAAACAGATTGTACAGAAACTACAAGGCCACACA < 41bp 1 0.62851266241138 1 0.380642056465149 experiment 0.74297467517724 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR5 ENSG00000196363 CDS Human protein_coding chr9:137021694 chr9:137021685 nonsynonymous SNV 0.990 1 12 hm5C_associated_SNPs_21627 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:137021646-137021708
64251 chr16 66918543 66918543 1 + C T COAD 66918554 + 66918534 66918574 41 CCAATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC CCAATTCCCTAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC < 41bp 1 0.709623551553637 1 0.193609416484833 experiment 0.580752896892726 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918554 chr16:66918543 nonsynonymous SNV 0.999 4 10 hm5C_associated_SNPs_21628 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:66918540-66918560
64251 chrX 2641394 2641394 1 + A G COAD 2641380 + 2641360 2641400 41 GGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGA GGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGGAGGGGA < 41bp 1 0.400523658833123 1 0.706116080284119 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641380 chrX:2641394 nonsynonymous SNV 0.052 0 35 hm5C_associated_SNPs_21629 0 0 7 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chrX 2641394 2641394 1 + A G COAD 2641383 + 2641363 2641403 41 GGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGAAGA GGCAGTGATGGTGGAGGCAGCCACAGGAAAGGAGGGGAAGA < 41bp 1 0.325370565661545 1 0.432011872529984 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CD99 ENSG00000002586 CDS Human protein_coding chrX:2641383 chrX:2641394 nonsynonymous SNV 0.052 0 32 hm5C_associated_SNPs_21630 0 0 7 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chrX 2641394 2641394 1 + A G COAD 2641384 + 2641364 2641404 41 GCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGAAGAG GCAGTGATGGTGGAGGCAGCCACAGGAAAGGAGGGGAAGAG < 41bp 1 0.583363734286616 1 0.654635727405548 experiment 0.833272531426768 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CD99 ENSG00000002586 CDS Human protein_coding chrX:2641384 chrX:2641394 nonsynonymous SNV 0.052 0 31 hm5C_associated_SNPs_21631 0 0 7 DDX3X POSTAR2 ENCODE chrX:2641368-2641405
64251 chr14 105355856 105355856 1 + G A COAD 105355874 + 105355854 105355894 41 ACGAGGCGCCGGCAGCAGGGCTCGGATTACACGTCCACCTC ACAAGGCGCCGGCAGCAGGGCTCGGATTACACGTCCACCTC < 41bp 1 0.521066054240592 1 0.218214333057404 experiment 0.957867891518817 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105355874 chr14:105355856 synonymous SNV . 0 3 hm5C_associated_SNPs_21632 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:105355856-105355880
64251 chr9 106876984 106876984 1 + G C COAD 106876976 + 106876956 106876996 41 AACTTTTGTATTTCAGGGATCCAGAGAAGAACTGGAATAGA AACTTTTGTATTTCAGGGATCCAGAGAACAACTGGAATAGA < 41bp 1 0.289359479438838 1 0.372290909290314 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106876976 chr9:106876984 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_21634 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:106876973-106876995
64251 chr5 86645041 86645041 1 + C G COAD 86645061 + 86645041 86645081 41 CTGCAGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGCG GTGCAGTTTTCTTGTGAGGCCCTCAGATAATACTCCTGGCG < 41bp 1 0.16189064021191 1 0.141083419322968 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RASA1 ENSG00000145715 CDS Human protein_coding chr5:86645061 chr5:86645041 synonymous SNV . 0 1 hm5C_associated_SNPs_21635 0 0 3 BUD13 POSTAR2 ENCODE chr5:86645011-86645070
64251 chr17 7836596 7836596 1 + G A COAD 7836604 + 7836584 7836624 41 CCGCCTCATGAAGGGTTAGACGGCTTCGCCCAAGAATTGAG CCGCCTCATGAAAGGTTAGACGGCTTCGCCCAAGAATTGAG < 41bp 1 0.46024179854714 1 0.243248581886292 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7836604 chr17:7836596 nonsynonymous SNV 0.003 0 13 hm5C_associated_SNPs_21636 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:7836590-7836617
64251 chr7 44806254 44806254 1 + G T COAD 44806243 + 44806223 44806263 41 CATGTCTGGAGCCGGGGAGGCCCCAGAACCAGCTCTGGACG CATGTCTGGAGCCGGGGAGGCCCCAGAACCATCTCTGGACG < 41bp 1 0.560589886493581 1 0.516435444355011 experiment 0.878820227012838 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806243 chr7:44806254 nonsynonymous SNV 0.880 0 32 hm5C_associated_SNPs_21637 0 0 1 PRPF8 POSTAR2 ENCODE chr7:44806244-44806306
64251 chr7 44806254 44806254 1 + G T COAD 44806244 + 44806224 44806264 41 ATGTCTGGAGCCGGGGAGGCCCCAGAACCAGCTCTGGACGT ATGTCTGGAGCCGGGGAGGCCCCAGAACCATCTCTGGACGT < 41bp 1 0.329691780961648 1 0.243260115385056 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806244 chr7:44806254 nonsynonymous SNV 0.880 0 31 hm5C_associated_SNPs_21638 0 0 1 PRPF8 POSTAR2 ENCODE chr7:44806244-44806306
64251 chr7 44806254 44806254 1 + G T COAD 44806245 + 44806225 44806265 41 TGTCTGGAGCCGGGGAGGCCCCAGAACCAGCTCTGGACGTG TGTCTGGAGCCGGGGAGGCCCCAGAACCATCTCTGGACGTG < 41bp 1 0.541042636199557 1 0.264454960823059 experiment 0.917914727600886 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806245 chr7:44806254 nonsynonymous SNV 0.880 0 30 hm5C_associated_SNPs_21639 0 0 1 PRPF8 POSTAR2 ENCODE chr7:44806244-44806306
64251 chr7 44806254 44806254 1 + G T COAD 44806246 + 44806226 44806266 41 GTCTGGAGCCGGGGAGGCCCCAGAACCAGCTCTGGACGTGA GTCTGGAGCCGGGGAGGCCCCAGAACCATCTCTGGACGTGA < 41bp 1 0.70101583850859 1 0.586799919605255 experiment 0.59796832298282 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806246 chr7:44806254 nonsynonymous SNV 0.880 0 29 hm5C_associated_SNPs_21640 0 0 1 PRPF8 POSTAR2 ENCODE chr7:44806244-44806306
64251 chr9 33912043 33912043 1 + C A COAD 33912033 + 33912013 33912053 41 CCCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAAATGGA CCCAGCCAATGTCGATGCTTCAGTTATGTTAAGGAAATGGA < 41bp 1 0.154003764227126 1 0.0804048478603363 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33912033 chr9:33912043 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_21641 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:33912003-33912061
64251 chr19 50912817 50912817 1 + G A COAD 50912807 + 50912787 50912827 41 AGCTGGCCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTG AGCTGGCCAAGGAGACAGACCCCCTCCGGCACCAGGTCCTG < 41bp 1 0.188954749621026 1 0.0136010348796844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912807 chr19:50912817 nonsynonymous SNV 0.995 3 31 hm5C_associated_SNPs_21642 0 0 5 DDX24 POSTAR2 ENCODE chr19:50912775-50912821
64251 chr19 50912817 50912817 1 + G A COAD 50912813 + 50912793 50912833 41 CCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTGGATGGA CCAAGGAGACAGACCCCCTCCGGCACCAGGTCCTGGATGGA < 41bp 1 0.625312409902193 1 0.765428066253662 experiment 0.749375180195614 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912813 chr19:50912817 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_21643 0 0 5 DDX24 POSTAR2 ENCODE chr19:50912775-50912821
64251 chr16 66977822 66977822 1 + C T COAD 66977830 + 66977810 66977850 41 ACCTACAGCCTGCGGTGGGCCGGGCTCTGAAGGCCCACAGG ACCTACAGCCTGTGGTGGGCCGGGCTCTGAAGGCCCACAGG < 41bp 1 0.766105381782156 1 0.730630338191986 experiment 0.467789236435687 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66977830 chr16:66977822 nonsynonymous SNV 0.027 0 13 hm5C_associated_SNPs_21644 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:66977793-66977837
64251 chr1 45973939 45973939 1 + G A COAD 45973929 + 45973909 45973949 41 TCATTGCTGACTACGAGGTGCACCCCAACCGACGCCCCAAG TCATTGCTGACTACGAGGTGCACCCCAACCAACGCCCCAAG < 41bp 1 0.249062620120748 1 0.0347805619239807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMACHC ENSG00000132763 CDS Human protein_coding chr1:45973929 chr1:45973939 nonsynonymous SNV 0.973 5 31 hm5C_associated_SNPs_21646 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:45973933-45973973
64251 chr19 10940902 10940902 1 + C T COAD 10940900 + 10940880 10940920 41 GGCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCC GGCCCCCCCTGATTCCTGTTCCTGTGGGGGCAGCAGCCTCC < 41bp 1 0.190906575899888 1 0.0740089118480682 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940900 chr19:10940902 synonymous SNV . 0 23 hm5C_associated_SNPs_21653 1 0 5 FMR1 POSTAR2 ENCODE chr19:10940887-10940967
64251 chr19 10940902 10940902 1 + C T COAD 10940901 + 10940881 10940921 41 GCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCCT GCCCCCCCTGATTCCTGTTCCTGTGGGGGCAGCAGCCTCCT < 41bp 1 0.521939337925716 1 0.207538962364197 experiment 0.956121324148568 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940901 chr19:10940902 synonymous SNV . 0 22 hm5C_associated_SNPs_21654 1 0 5 FMR1 POSTAR2 ENCODE chr19:10940887-10940967
64251 chr21 45534105 45534105 1 + A G COAD 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGCGCCACTTCCACTTCAAGGGCTCTGTGCACAG < 41bp 1 0.774860593524923 1 0.717414557933807 experiment 0.450278812950153 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534105 nonsynonymous SNV 0.987 3 11 hm5C_associated_SNPs_21655 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45534090-45534113
64251 chr12 27933782 27933782 1 + C A COAD 27933800 + 27933780 27933820 41 CCCCAAGCTCCAGGGGATGTCAGCCTGAAGCAGAGGCTGAG CCACAAGCTCCAGGGGATGTCAGCCTGAAGCAGAGGCTGAG < 41bp 1 0.562885276109878 1 0.420019388198853 experiment 0.874229447780244 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933800 chr12:27933782 synonymous SNV . 0 3 hm5C_associated_SNPs_21656 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:27933758-27933786
64251 chr9 139730247 139730247 1 + G A COAD 139730261 + 139730241 139730281 41 CGCCACGCTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG CGCCACACTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG < 41bp 1 0.542351534783662 1 0.892047882080078 experiment 0.915296930432675 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139730261 chr9:139730247 synonymous SNV . 0 7 hm5C_associated_SNPs_21657 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:139730240-139730280
64251 chr1 6681571 6681571 1 + C A COAD 6681570 + 6681550 6681590 41 CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT CCACACCTGGATTCACCTGTCATGTGCGAAAATCCGGAAAT < 41bp 1 0.410550018743738 1 0.693740904331207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681570 chr1:6681571 synonymous SNV . 0 22 hm5C_associated_SNPs_21659 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6681559-6681602
64251 chr11 722484 722484 1 + C T COAD 722478 + 722458 722498 41 TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTCCC TCCCGAGATGCCGTGGACTTCCTGCGTGGCCACCTGGTCCC < 41bp 1 0.325101280137441 1 0.107087254524231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722478 chr11:722484 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_21660 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722470-722502
64251 chr12 58109596 58109596 1 + C T COAD 58109602 + 58109582 58109622 41 ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT ATCGATCGCGTGGATGAGCCCTTGTCCTGCTCTTATGTGCT < 41bp 1 0.383112490950858 1 0.0361058413982391 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OS9 ENSG00000135506 CDS Human protein_coding chr12:58109602 chr12:58109596 synonymous SNV . 0 15 hm5C_associated_SNPs_21661 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr17 41143142 41143142 1 + A G COAD 41143135 + 41143115 41143155 41 TGCCAACCTCCAGGACCTCTCTCTGGGAGGCAAGGATGAGC TGCCAACCTCCAGGACCTCTCTCTGGGGGGCAAGGATGAGC < 41bp 1 0.499557805967852 1 0.516774296760559 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41143135 chr17:41143142 synonymous SNV . 0 28 hm5C_associated_SNPs_21662 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:41143098-41143144
64251 chr12 57575018 57575018 1 + G A COAD 57575017 + 57574997 57575037 41 TGCCCACGTCAGAGACGACCCGCTCCTGCATGTGCACAGCC TGCCCACGTCAGAGACGACCCACTCCTGCATGTGCACAGCC < 41bp 1 0.0810134526198741 1 0.0814922451972961 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57575017 chr12:57575018 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_21663 0 0 1 BUD13 POSTAR2 ENCODE chr12:57574978-57575022
64251 chr6 44274745 44274745 1 - C T COAD 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CATCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC < 41bp 1 0.466793251579927 1 0.83631706237793 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274745 nonsynonymous SNV 0.992 5 2 hm5C_associated_SNPs_21664 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44274735-44274760
64251 chr4 6642902 6642902 1 + A G COAD 6642888 + 6642868 6642908 41 GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGA GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCGAGGAGA < 41bp 1 0.759279882378159 1 0.744000375270844 experiment 0.481440235243682 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642888 chr4:6642902 nonsynonymous SNV 0.947 1 35 hm5C_associated_SNPs_21666 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:6642874-6642909
64251 chr20 25273215 25273215 1 + C T COAD 25273229 + 25273209 25273249 41 GGCCTGCGGGTGGAGGATGTCGAGGCCTTGGACCGGAAAGG GGCCTGTGGGTGGAGGATGTCGAGGCCTTGGACCGGAAAGG < 41bp 1 0.78669069852133 1 0.939565002918243 experiment 0.42661860295734 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PYGB ENSG00000100994 CDS Human protein_coding chr20:25273229 chr20:25273215 nonsynonymous SNV 0.888 4 7 hm5C_associated_SNPs_21668 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr20:25273202-25273225
64251 chr1 44069403 44069403 1 + C T COAD 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCTGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.417903434951627 1 0.0623518824577332 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069403 synonymous SNV . 0 6 hm5C_associated_SNPs_21669 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr11 67202550 67202550 1 + G A COAD 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TCTACCTCCACTCCTGCCACCACCGCCGCCCTCGACCACCG < 41bp 1 0.70909657143031 1 0.317344486713409 experiment 0.58180685713938 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202550 synonymous SNV . 0 22 hm5C_associated_SNPs_21671 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202550 67202550 1 + G A COAD 67202551 + 67202531 67202571 41 TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCC TACCTCCACTCCTGCCACCACCGCCGCCCTCGACCACCGCC < 41bp 1 0.357645336897268 1 0.190523743629456 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202551 chr11:67202550 synonymous SNV . 0 20 hm5C_associated_SNPs_21672 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202550 67202550 1 + G A COAD 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCACCGCCGCCCTCGACCACCGCCCCTC < 41bp 1 0.622271597910281 1 0.222388625144958 experiment 0.755456804179438 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202550 synonymous SNV . 0 16 hm5C_associated_SNPs_21673 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr10 104679412 104679412 1 + C T COAD 104679423 + 104679403 104679443 41 CTTCCTACCCGGTCAGCAAGCTGCTGGACTGCGTCCTGGGC CTTCCTACCTGGTCAGCAAGCTGCTGGACTGCGTCCTGGGC < 41bp 1 0.504348903424876 1 0.407282561063766 experiment 0.991302193150247 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679423 chr10:104679412 nonsynonymous SNV 1.000 5 10 hm5C_associated_SNPs_21676 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104679386-104679422
64251 chr20 39721181 39721181 1 + C A COAD 39721195 + 39721175 39721215 41 ATTTGCCCCACCATATGAGCCTCTTCCAGAGAATGTCAAGT ATTTGCACCACCATATGAGCCTCTTCCAGAGAATGTCAAGT < 41bp 1 0.100197390313904 1 0.0352682173252106 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39721195 chr20:39721181 synonymous SNV . 0 7 hm5C_associated_SNPs_21677 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39721149-39721224
64251 chr15 63358179 63358179 1 + C T COAD 63358189 + 63358169 63358209 41 TGTCTATTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATC TGTCTATTCTTCAGCTGACCCTGGTTCTCTCTCTTAGCATC < 41bp 1 0.516206587373086 1 0.108930230140686 experiment 0.967586825253827 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63358189 chr15:63358179 nonsynonymous SNV 0.602 2 11 hm5C_associated_SNPs_21678 0 0 4 PTBP1 POSTAR2 GSE19323,GSM480479 chr15:63358160-63358200
64251 chr15 63358179 63358179 1 + C T COAD 63358195 + 63358175 63358215 41 TTCTCCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCT TTCTTCAGCTGACCCTGGTTCTCTCTCTTAGCATCCTGCCT < 41bp 1 0.114511674060045 1 0.0443845987319946 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPM1 ENSG00000140416 CDS Human protein_coding chr15:63358195 chr15:63358179 nonsynonymous SNV 0.602 2 5 hm5C_associated_SNPs_21679 0 0 4 PTBP1 POSTAR2 GSE19323,GSM480479 chr15:63358160-63358200
64251 chr7 5336823 5336823 1 + C T COAD 5336820 + 5336800 5336840 41 CACGACGTTGTCGCCGGGGACGTCCACTTCGTAAGTGCGCA CACGACGTTGTCGCCGGGGACGTTCACTTCGTAAGTGCGCA < 41bp 1 0.0349921875482977 1 0.0635756552219391 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5336820 chr7:5336823 synonymous SNV . 0 24 hm5C_associated_SNPs_21680 0 0 1 BUD13 POSTAR2 ENCODE chr7:5336813-5336826
64251 chr1 21771647 21771647 1 + C T COAD 21771644 + 21771624 21771664 41 AGGCCCTGATGTAGAAACTTCCCCATTCGGTGCACCAAGAG AGGCCCTGATGTAGAAACTTCCCTATTCGGTGCACCAAGAG < 41bp 1 0.283461270952681 1 0.296848237514496 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBPF3 ENSG00000142794 CDS Human protein_coding chr1:21771644 chr1:21771647 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_21681 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:21771637-21771667
64251 chr2 204259440 204259440 1 + G A COAD 204259431 + 204259411 204259451 41 TTCTTTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGC TTCTTTTTGTAGGCGGCACTCCCCCTATCACACACTGGAGC < 41bp 1 0.305692800161069 1 0.201586306095123 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259431 chr2:204259440 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_21682 0 0 3 PPIG POSTAR2 ENCODE chr2:204259422-204259484
64251 chr2 204259440 204259440 1 + G A COAD 204259435 + 204259415 204259455 41 TTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGCCAGT TTTTGTAGGCGGCACTCCCCCTATCACACACTGGAGCCAGT < 41bp 1 0.201057679286163 1 0.165690511465073 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259435 chr2:204259440 nonsynonymous SNV 1.000 5 26 hm5C_associated_SNPs_21683 0 0 3 PPIG POSTAR2 ENCODE chr2:204259422-204259484
64251 chr3 4776937 4776937 1 + C A COAD 4776929 + 4776909 4776949 41 TCACCTTGACAAGGAGGGGGCTTCCAATCTAGTTATCGACC TCACCTTGACAAGGAGGGGGCTTCCAATATAGTTATCGACC < 41bp 1 0.0226176248701017 1 0.0920966863632202 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4776929 chr3:4776937 nonsynonymous SNV 0.984 5 29 hm5C_associated_SNPs_21684 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr3:4776929-4776950
64251 chr1 204379492 204379492 1 - C T COAD 204379494 - 204379474 204379514 41 CCCAACACAGTTTGTTCCTGCTGCTGGAGACATTCCTGGAA CCCAACACAGTTTGTTCCTGCTACTGGAGACATTCCTGGAA < 41bp 1 0.365286233425936 1 0.11737248301506 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379494 chr1:204379492 nonsynonymous SNV 0.025 1 23 hm5C_associated_SNPs_21685 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr1:204379455-204379500
64251 chr1 45808613 45808613 1 + G A COAD 45808600 + 45808580 45808620 41 ATCCTTCCAGCATGAGGGACCATATTGATTACCGCTGCTGC ATCCTTCCAGCATGAGGGACCATATTGATTACCACTGCTGC < 41bp 1 0.0962581955528892 1 0.0473159849643707 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808600 chr1:45808613 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_21686 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:45808574-45808630
64251 chr13 93879772 93879772 1 + C T COAD 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCGCTGGGGCGGATGTGAAGGCTC < 41bp 1 0.727634719089821 1 0.894984602928162 experiment 0.544730561820359 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879772 synonymous SNV . 0 22 hm5C_associated_SNPs_21687 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr1 223934705 223934705 1 + C T COAD 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATCAATGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA < 41bp 1 0.742143655257172 1 0.660180330276489 experiment 0.515712689485655 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934705 synonymous SNV . 0 7 hm5C_associated_SNPs_21690 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934705 223934705 1 + C T COAD 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TCAATGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT < 41bp 1 0.0655229726604789 1 0.064136415719986 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934705 synonymous SNV . 0 5 hm5C_associated_SNPs_21691 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 156756826 156756826 1 + G A COAD 156756842 + 156756822 156756862 41 GGACGATGCAGCCAATGCCCCCCTTGAATTCAAGATGGCAG GGACAATGCAGCCAATGCCCCCCTTGAATTCAAGATGGCAG < 41bp 1 0.0558604791430631 1 0.125044703483582 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756842 chr1:156756826 nonsynonymous SNV 0.999 2 5 hm5C_associated_SNPs_21694 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:156756755-156756848
64251 chr17 17701375 17701375 1 + C A COAD 17701357 + 17701337 17701377 41 ACCCGGCCAACTTCAAGGACCTTGGGGACCTCTGTGGGCCC ACCCGGCCAACTTCAAGGACCTTGGGGACCTCTGTGGGACC < 41bp 1 0.15122000582292 1 0.125442773103714 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17701357 chr17:17701375 nonsynonymous SNV 0.997 4 39 hm5C_associated_SNPs_21696 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:17701331-17701393
64251 chr11 65402797 65402797 1 + C T COAD 65402789 + 65402769 65402809 41 CATCTCACATGAGGGTGACCCAGCATGGCGCAGCGCCATCC CATCTCACATGAGGGTGACCCAGCATGGTGCAGCGCCATCC < 41bp 1 0.690664771540778 1 0.662644863128662 experiment 0.618670456918444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402789 chr11:65402797 nonsynonymous SNV 0.957 4 29 hm5C_associated_SNPs_21697 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402797 65402797 1 + C T COAD 65402799 + 65402779 65402819 41 GAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACAC GAGGGTGACCCAGCATGGTGCAGCGCCATCCTCAGCAACAC < 41bp 1 0.306021424175865 1 0.232081025838852 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402799 chr11:65402797 nonsynonymous SNV 0.957 4 19 hm5C_associated_SNPs_21698 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402797 65402797 1 + C T COAD 65402802 + 65402782 65402822 41 GGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCC GGTGACCCAGCATGGTGCAGCGCCATCCTCAGCAACACGCC < 41bp 1 0.402017510513352 1 0.37116414308548 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402802 chr11:65402797 nonsynonymous SNV 0.957 4 16 hm5C_associated_SNPs_21699 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402797 65402797 1 + C T COAD 65402804 + 65402784 65402824 41 TGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCT TGACCCAGCATGGTGCAGCGCCATCCTCAGCAACACGCCCT < 41bp 1 0.0153849716988403 1 0.0185776948928833 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402804 chr11:65402797 nonsynonymous SNV 0.957 4 14 hm5C_associated_SNPs_21700 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402797 65402797 1 + C T COAD 65402805 + 65402785 65402825 41 GACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCTC GACCCAGCATGGTGCAGCGCCATCCTCAGCAACACGCCCTC < 41bp 1 0.0531660914043323 1 0.0646606981754303 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402805 chr11:65402797 nonsynonymous SNV 0.957 4 13 hm5C_associated_SNPs_21701 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr19 11145705 11145705 1 + G A COAD 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCAGCTGAC < 41bp 1 0.664126845161227 1 0.582806468009949 experiment 0.671746309677546 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145705 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_21702 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145705 11145705 1 + G A COAD 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGGAGGTGGAGCAGCTGACCTGTGAGGAGGAG < 41bp 1 0.421449754052237 1 0.582428872585297 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145705 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_21703 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145705 11145705 1 + G A COAD 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGGAGGTGGAGCAGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.274433197574936 1 0.398589968681335 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145705 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_21704 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr3 51315089 51315089 1 + C T COAD 51315093 + 51315073 51315113 41 TGGAGAGCCTCCTGGACGTGCTCTTGCAGACTCTGCTCACC TGGAGAGCCTCCTGGATGTGCTCTTGCAGACTCTGCTCACC < 41bp 1 0.128353176659507 1 0.0677226483821869 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOCK3 ENSG00000088538 CDS Human protein_coding chr3:51315093 chr3:51315089 synonymous SNV . 0 17 hm5C_associated_SNPs_21707 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:51315077-51315093
64251 chr13 111287911 111287911 1 + G A COAD 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTCCAGAAAGGAGAGCGCAACATCCTCTCCAACGGCCA < 41bp 1 0.690660604881182 1 0.152411878108978 experiment 0.618678790237637 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287911 nonsynonymous SNV 0.004 4 22 hm5C_associated_SNPs_21708 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111287898-111287936
64251 chr4 78086980 78086980 1 + G A COAD 78086960 + 78086940 78086980 41 CTTTTTCTCTTTAGTGAGGACTCTTGTGAAGATATGAGTTG CTTTTTCTCTTTAGTGAGGACTCTTGTGAAGATATGAGTTA < 41bp 1 0.165036385857009 1 0.2591632604599 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCNG2 ENSG00000138764 CDS Human protein_coding chr4:78086960 chr4:78086980 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_21709 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:78086977-78087015
64251 chr9 131247126 131247126 1 + G T COAD 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGATGAG < 41bp 1 0.407000356087603 1 0.510841488838196 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247126 nonsynonymous SNV 0.932 4 38 hm5C_associated_SNPs_21710 0 0 8 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr1 228879193 228879193 1 + G A COAD 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACACAGTC < 41bp 1 0.0960624463234506 1 0.127374857664108 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879193 synonymous SNV . 0 36 hm5C_associated_SNPs_21711 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:228879180-228879200
64251 chr5 10263288 10263288 1 + G A COAD 10263299 + 10263279 10263319 41 TTTGCCGACGCACTGGAGGTCATCCCCATGGCCCTCTCTGA TTTGCCGACACACTGGAGGTCATCCCCATGGCCCTCTCTGA < 41bp 1 0.0998781612215391 1 0.054828017950058 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10263299 chr5:10263288 nonsynonymous SNV 0.006 4 10 hm5C_associated_SNPs_21712 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:10263260-10263300
64251 chr3 61975365 61975365 1 + T C COAD 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTACTGAC < 41bp 1 0.205930376668183 1 0.184089571237564 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975365 nonsynonymous SNV 0.997 1 37 hm5C_associated_SNPs_21713 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr6 26124575 26124575 1 + A G COAD 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCGA < 41bp 1 0.592469556952244 1 0.115151911973953 experiment 0.815060886095511 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124575 nonsynonymous SNV 0.874 2 40 hm5C_associated_SNPs_21714 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:26124560-26124580
64251 chr19 4268630 4268630 1 + C T COAD 4268640 + 4268620 4268660 41 TGACGCCTGGCGCGTCCTCCCTGAGCCAACTGGGTGCATAC TGACGCCTGGTGCGTCCTCCCTGAGCCAACTGGGTGCATAC < 41bp 1 0.764945869643838 1 0.502533853054047 experiment 0.470108260712324 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4268640 chr19:4268630 synonymous SNV . 0 11 hm5C_associated_SNPs_21715 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:4268629-4268661
64251 chr1 155033946 155033946 1 + C A COAD 155033936 + 155033916 155033956 41 CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG CCCCCCCTTCCAGGCCGCTGCCGCCTGACCATGTGTCCAAG < 41bp 1 0.220807260232344 1 0.274939805269241 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155033936 chr1:155033946 nonsynonymous SNV 0.998 3 31 hm5C_associated_SNPs_21716 0 0 4 PRPF8 POSTAR2 ENCODE chr1:155033905-155034009
64251 chr10 3155602 3155602 1 + C T COAD 3155619 + 3155599 3155639 41 ACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC ACCTGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC < 41bp 1 0.711957533203004 1 0.793339014053345 experiment 0.576084933593993 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3155619 chr10:3155602 synonymous SNV . 0 4 hm5C_associated_SNPs_21717 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:3155584-3155603
64251 chr17 72435981 72435981 1 + G T COAD 72435978 + 72435958 72435998 41 CTCTTCCTGTTCCCAGGGGCCTGGGCCCAGGGCCATGTCCC CTCTTCCTGTTCCCAGGGGCCTGTGCCCAGGGCCATGTCCC < 41bp 1 0.243462490021364 1 0.11256805062294 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72435978 chr17:72435981 nonsynonymous SNV 0.104 0 24 hm5C_associated_SNPs_21718 0 0 5 DDX3X POSTAR2 ENCODE chr17:72435936-72436018
64251 chr22 42042964 42042964 1 + G T COAD 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGTCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG < 41bp 1 0.0797976727678391 1 0.224242150783539 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042964 nonsynonymous SNV 0.861 3 9 hm5C_associated_SNPs_21719 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr22:42042960-42042980
64251 chr17 53852170 53852170 1 + G T COAD 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTCTATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT < 41bp 1 0.288001746518068 1 0.117260336875916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852170 nonsynonymous SNV 0.998 4 6 hm5C_associated_SNPs_21721 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:53852170-53852193
64251 chr3 11596306 11596306 1 + G A COAD 11596287 + 11596267 11596307 41 CTCCCCTTCTCCATGCAGATCTGGGACATGAGCGATGATGA CTCCCCTTCTCCATGCAGATCTGGGACATGAGCGATGATAA < 41bp 1 0.607311861176282 1 0.543082594871521 experiment 0.785376277647436 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATG7 ENSG00000197548 CDS Human protein_coding chr3:11596287 chr3:11596306 nonsynonymous SNV 0.489 3 40 hm5C_associated_SNPs_21722 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:11596293-11596325
64251 chr19 54631736 54631736 1 + G A COAD 54631719 + 54631699 54631739 41 CGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTAT CGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCATAT < 41bp 1 0.780935053760038 1 0.699302017688751 experiment 0.438129892479924 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631719 chr19:54631736 nonsynonymous SNV 0.984 5 38 hm5C_associated_SNPs_21724 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr19 54631736 54631736 1 + G A COAD 54631730 + 54631710 54631750 41 GACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAG GACGGAGATCCGGAAGCAGGCCAACCATATGAGCTTCGGAG < 41bp 1 0.0928509581792803 1 0.119075268507004 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631730 chr19:54631736 nonsynonymous SNV 0.984 5 27 hm5C_associated_SNPs_21725 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr19 54631736 54631736 1 + G A COAD 54631731 + 54631711 54631751 41 ACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGA ACGGAGATCCGGAAGCAGGCCAACCATATGAGCTTCGGAGA < 41bp 1 0.284180553666371 1 0.0682839155197144 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631731 chr19:54631736 nonsynonymous SNV 0.984 5 26 hm5C_associated_SNPs_21726 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr19 54631736 54631736 1 + G A COAD 54631735 + 54631715 54631755 41 AGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAGGTC AGATCCGGAAGCAGGCCAACCATATGAGCTTCGGAGAGGTC < 41bp 1 0.145869912789041 1 0.153338491916656 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631735 chr19:54631736 nonsynonymous SNV 0.984 5 22 hm5C_associated_SNPs_21727 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr19 54631736 54631736 1 + G A COAD 54631743 + 54631723 54631763 41 AAGCAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACTCCC AAGCAGGCCAACCATATGAGCTTCGGAGAGGTCAGACTCCC < 41bp 1 0.33408603037653 1 0.050141841173172 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631743 chr19:54631736 nonsynonymous SNV 0.984 5 14 hm5C_associated_SNPs_21728 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr19 54631736 54631736 1 + G A COAD 54631746 + 54631726 54631766 41 CAGGCCAACCGTATGAGCTTCGGAGAGGTCAGACTCCCAGA CAGGCCAACCATATGAGCTTCGGAGAGGTCAGACTCCCAGA < 41bp 1 0.641038873865038 1 0.710952281951904 experiment 0.717922252269925 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54631746 chr19:54631736 nonsynonymous SNV 0.984 5 11 hm5C_associated_SNPs_21729 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54631716-54631740
64251 chr22 39078403 39078403 1 + G A COAD 39078388 + 39078368 39078408 41 AGATGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCCACT AGATGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAACCACT < 41bp 1 0.319445004846113 1 0.515018165111542 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078388 chr22:39078403 nonsynonymous SNV 0.998 1 36 hm5C_associated_SNPs_21730 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39078392-39078424
64251 chr19 18976564 18976564 1 + C A COAD 18976545 + 18976525 18976565 41 ATCTCCATGAGCCAGCCTTCCCAGATGAGCCAGCCCGGCCT ATCTCCATGAGCCAGCCTTCCCAGATGAGCCAGCCCGGCAT < 41bp 1 0.747382643909781 1 0.238314062356949 experiment 0.505234712180437 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976545 chr19:18976564 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_21731 0 0 2 RPS3 POSTAR2 ENCODE chr19:18976531-18976577
64251 chr2 118579618 118579618 1 + G A COAD 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCCATCTGCTGGACCAT < 41bp 1 0.499974289134511 1 0.112006306648254 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579618 nonsynonymous SNV 0.988 3 28 hm5C_associated_SNPs_21734 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579554-118579619
64251 chr9 136217511 136217511 1 + G T COAD 136217530 + 136217510 136217550 41 AGGGAAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACC ATGGAAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACC < 41bp 1 0.245783928184156 1 0.0460740327835083 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136217530 chr9:136217511 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_21735 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:136217480-136217520
64251 chrX 70517784 70517784 1 + A T COAD 70517781 + 70517761 70517801 41 AGGATTCAAGGGAACCTTCCCTGATGCGGTATATCTCCCAT AGGATTCAAGGGAACCTTCCCTGTTGCGGTATATCTCCCAT < 41bp 1 0.452949153669734 1 0.0988571345806122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517781 chrX:70517784 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_21751 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70517733-70517805
64251 chr14 93119173 93119173 1 + T C COAD 93119189 + 93119169 93119209 41 ACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTG ACGCCTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTG < 41bp 1 0.405511294129328 1 0.286008059978485 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIN3 ENSG00000100599 CDS Human protein_coding chr14:93119189 chr14:93119173 synonymous SNV . 0 5 hm5C_associated_SNPs_21752 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:93119171-93119190
64251 chrX 70517783 70517783 1 + G T COAD 70517781 + 70517761 70517801 41 AGGATTCAAGGGAACCTTCCCTGATGCGGTATATCTCCCAT AGGATTCAAGGGAACCTTCCCTTATGCGGTATATCTCCCAT < 41bp 1 0.283085729745391 1 0.0705422163009644 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517781 chrX:70517783 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_21753 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70517715-70517783
64251 chr7 128491319 128491319 1 + A T COAD 128491320 + 128491300 128491340 41 TTCTATGTGGATGCCATCAACAGCCGCCATGTCAGTGCCTA TTCTATGTGGATGCCATCATCAGCCGCCATGTCAGTGCCTA < 41bp 1 0.414895220579047 1 0.881879270076752 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128491320 chr7:128491319 nonsynonymous SNV 1.000 5 20 hm5C_associated_SNPs_21755 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128491290-128491322
64251 chr17 12028668 12028668 1 + T C COAD 12028682 + 12028662 12028702 41 GATGTCTGGAGTTTGGGGATCACATTGGTATGTTTATGCTG GATGTCCGGAGTTTGGGGATCACATTGGTATGTTTATGCTG < 41bp 1 0.45408098623122 1 0.128567934036255 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12028682 chr17:12028668 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_21757 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:12028650-12028672
64251 chr7 128486398 128486398 1 + C T COAD 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTCGCTGTGCCTAAGAGCCCCTTCCGAGTGGGCGTGACC < 41bp 1 0.0217944100841227 1 0.0274174511432648 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486398 synonymous SNV . 0 14 hm5C_associated_SNPs_21765 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr7:128486369-128486399
64251 chr9 139747579 139747579 1 + C A COAD 139747567 + 139747547 139747587 41 CCAGCAGCAGGGTCCTCAGGCTGGGCCTGGGTCCCCAACCA CCAGCAGCAGGGTCCTCAGGCTGGGCCTGGGTACCCAACCA < 41bp 1 0.748049408444426 1 0.682729423046112 experiment 0.503901183111147 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139747567 chr9:139747579 synonymous SNV . 0 33 hm5C_associated_SNPs_21766 0 0 4 BUD13 POSTAR2 ENCODE chr9:139747578-139747641
64251 chr15 90771577 90771577 1 + G T COAD 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TTGCTCTACCTGCACCGGAACAGCATGAAAGTCTTCCTGAA < 41bp 1 0.612695983311578 1 0.711486458778381 experiment 0.774608033376843 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771577 nonsynonymous SNV 0.995 3 11 hm5C_associated_SNPs_21767 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr1 160323964 160323964 1 + C A COAD 160323975 + 160323955 160323995 41 TGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC TGCTGTCATACTCAGGAGGCCAAATCAGTCCCAGCCTCTCC < 41bp 1 0.246346387987415 1 0.12285777926445 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323975 chr1:160323964 synonymous SNV . 0 10 hm5C_associated_SNPs_21768 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:160323934-160323976
64251 chr19 1434854 1434854 1 + C T COAD 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGTGG < 41bp 1 0.277295247317446 1 0.160554617643356 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434854 synonymous SNV . 0 39 hm5C_associated_SNPs_21770 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434854 1434854 1 + C T COAD 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGTGGC < 41bp 1 0.345555167840769 1 0.137776613235474 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434854 synonymous SNV . 0 38 hm5C_associated_SNPs_21771 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434854 1434854 1 + C T COAD 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGTGGCT < 41bp 1 0.464405514342438 1 0.258863627910614 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434854 synonymous SNV . 0 37 hm5C_associated_SNPs_21772 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434854 1434854 1 + C T COAD 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGTGGCTT < 41bp 1 0.709806048138798 1 0.132909268140793 experiment 0.580387903722404 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434854 synonymous SNV . 0 36 hm5C_associated_SNPs_21773 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr18 74620330 74620330 1 + C T COAD 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATAGATGATAGCACTGTAGACCAGCAGAGCATGC < 41bp 1 0.461835542033731 1 0.208657830953598 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620330 synonymous SNV . 0 16 hm5C_associated_SNPs_21774 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr18:74620320-74620340
64251 chr1 90473023 90473023 1 + G A COAD 90473035 + 90473015 90473055 41 TGGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACT TGGTGGTCAATTTGAGAGCTCCTACCGGAATAGCCTTGACT < 41bp 1 0.0434020426306561 1 0.0349647700786591 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473035 chr1:90473023 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_21775 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr1 90473023 90473023 1 + G A COAD 90473036 + 90473016 90473056 41 GGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACTC GGTGGTCAATTTGAGAGCTCCTACCGGAATAGCCTTGACTC < 41bp 1 0.577864366022867 1 0.143146753311157 experiment 0.844271267954266 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473036 chr1:90473023 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_21776 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr14 23778031 23778031 1 + T G COAD 23778051 + 23778031 23778071 41 TTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGCGCG GTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGCGCG < 41bp 1 0.689924589990357 1 0.89295619726181 experiment 0.620150820019285 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCL2L2 ENSG00000129473 CDS Human protein_coding chr14:23778051 chr14:23778031 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_21777 0 0 8 PPIG POSTAR2 ENCODE chr14:23778023-23778040
64251 chr2 183616840 183616840 1 + A G COAD 183616850 + 183616830 183616870 41 AGTTACGAAGAGCATCAAATCTTCTTTATGGTCAGCTTAAG AGTTACGAAGGGCATCAAATCTTCTTTATGGTCAGCTTAAG < 41bp 1 0.425589180857087 1 0.254802405834198 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183616850 chr2:183616840 synonymous SNV . 0 11 hm5C_associated_SNPs_21778 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:183616827-183616842
64251 chr11 210611 210611 1 + G A COAD 210603 + 210583 210623 41 CTTTACCGACACCTGGGGACCCTTCTCCGGCACTGTGTGAT CTTTACCGACACCTGGGGACCCTTCTCCAGCACTGTGTGAT < 41bp 1 0.0123753486556758 1 0.0606067776679993 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:210603 chr11:210611 nonsynonymous SNV 0.920 3 29 hm5C_associated_SNPs_21779 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:210577-210617
64251 chr1 156255380 156255380 1 + G A COAD 156255378 + 156255358 156255398 41 CCGAAGACGATGCCAACCTGCTGCCTGAGAAAGCGGCCCGT CCGAAGACGATGCCAACCTGCTACCTGAGAAAGCGGCCCGT < 41bp 1 0.243629909654467 1 0.102375239133835 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM79 ENSG00000163472 CDS Human protein_coding chr1:156255378 chr1:156255380 synonymous SNV . 0 23 hm5C_associated_SNPs_21780 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:156255380-156255381
64251 chr1 984307 984307 1 + G A COAD 984297 + 984277 984317 41 GCCGCTCCTTCCTGGCCTTCCCCACTCTCCGCGCCTACCAC GCCGCTCCTTCCTGGCCTTCCCCACTCTCCACGCCTACCAC < 41bp 1 0.118804862459393 1 0.105666905641556 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984297 chr1:984307 nonsynonymous SNV 0.107 2 31 hm5C_associated_SNPs_21781 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:984301-984316
64251 chr6 30877253 30877253 1 + T C COAD 30877252 + 30877232 30877272 41 AGAACTGGGTGATGCGGATGCTCTTTCTGGAGCAGCCTTTG AGAACTGGGTGATGCGGATGCCCTTTCTGGAGCAGCCTTTG < 41bp 1 0.186012219232183 1 0.0337693989276886 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30877252 chr6:30877253 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_21783 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:30877229-30877256
64251 chr20 47896884 47896884 1 + T C COAD 47896873 + 47896853 47896893 41 CCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAG CCTGCTGGCATATATGATGACTTAGCTTTTTCCCCCGACAG < 41bp 1 0.141646166936301 1 0.0428601503372192 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896873 chr20:47896884 . . 0 32 hm5C_associated_SNPs_21784 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896884 47896884 1 + T C COAD 47896878 + 47896858 47896898 41 TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGA TGGCATATATGATGACTTAGCTTTTTCCCCCGACAGATCGA < 41bp 1 0.0496148627095883 1 0.0851960182189941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896878 chr20:47896884 . . 0 27 hm5C_associated_SNPs_21785 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896884 47896884 1 + T C COAD 47896885 + 47896865 47896905 41 TATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTT TATGATGACTTAGCTTTTTCCCCCGACAGATCGACTATGTT < 41bp 1 0.13317968194128 1 0.0474299788475037 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896885 chr20:47896884 . . 0 20 hm5C_associated_SNPs_21786 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896884 47896884 1 + T C COAD 47896886 + 47896866 47896906 41 ATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG ATGATGACTTAGCTTTTTCCCCCGACAGATCGACTATGTTG < 41bp 1 0.471244621307787 1 0.0697082877159119 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896886 chr20:47896884 . . 0 19 hm5C_associated_SNPs_21787 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896884 47896884 1 + T C COAD 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATGACTTAGCTTTTTCCCCCGACAGATCGACTATGTTGA < 41bp 1 0.0437812412494435 1 0.0886692404747009 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896884 . . 0 18 hm5C_associated_SNPs_21788 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896884 47896884 1 + T C COAD 47896899 + 47896879 47896919 41 TTTTTTCCCCGACAGATCGACTATGTTGATCTAACTTTTCT TTTTTCCCCCGACAGATCGACTATGTTGATCTAACTTTTCT < 41bp 1 0.126876804321914 1 0.0901049077510834 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896899 chr20:47896884 . . 0 6 hm5C_associated_SNPs_21789 0 0 112 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr19 14562786 14562786 1 + C T COAD 14562777 + 14562757 14562797 41 CGCCCAGCCCGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG CGCCCAGCCCGGGGCCTTTACAGCCGAAGTGGAAGCCTCAG < 41bp 1 0.52866822001171 1 0.756251037120819 experiment 0.942663559976581 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562777 chr19:14562786 synonymous SNV . 0 30 hm5C_associated_SNPs_21790 0 0 3 FMR1 POSTAR2 ENCODE chr19:14562767-14562807
64251 chr15 50782562 50782562 1 + A G COAD 50782564 + 50782544 50782584 41 TCATCTGCACCTCCTTCCACCCCTCCAACTCATAAAGCCAA TCATCTGCACCTCCTTCCGCCCCTCCAACTCATAAAGCCAA < 41bp 1 0.0333408978027934 1 0.089937686920166 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50782564 chr15:50782562 nonsynonymous SNV 0.999 1 19 hm5C_associated_SNPs_21791 0 0 3 GRWD1 POSTAR2 ENCODE chr15:50782504-50782716
64251 chrX 205508 205508 1 + C A COAD 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGCGCCATGTCGTGCTGAA < 41bp 1 0.48326010992496 1 0.198588818311691 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205508 nonsynonymous SNV 0.004 4 29 hm5C_associated_SNPs_21792 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205490-205510
64251 chr1 222837361 222837361 1 + C T COAD 222837353 + 222837333 222837373 41 TCTGCAGGTTAATATGGCTCCAAAAGGGCCCCCTCCTTTCC TCTGCAGGTTAATATGGCTCCAAAAGGGTCCCCTCCTTTCC < 41bp 1 0.551439127903416 1 0.275359332561493 experiment 0.897121744193169 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222837353 chr1:222837361 nonsynonymous SNV 0.988 3 29 hm5C_associated_SNPs_21793 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:222837360-222837380
64251 chr9 19336771 19336771 1 + A G COAD 19336770 + 19336750 19336790 41 ATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGAT ATGATGCTAACAATGGGGAGCGCACAGTCTTCGTCAGAGAT < 41bp 1 0.059103813167974 1 0.213537216186523 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336770 chr9:19336771 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_21794 0 0 1 QKI POSTAR2 ENCODE chr9:19336751-19336813
64251 chr1 39853297 39853297 1 + A G COAD 39853302 + 39853282 39853322 41 AAGCTAAGATGTCTGAGTTGCGAGTCACTCTGGATCCAGTG AAGCTAAGATGTCTGGGTTGCGAGTCACTCTGGATCCAGTG < 41bp 1 0.140614761954151 1 0.406929105520248 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39853302 chr1:39853297 nonsynonymous SNV 0.992 0 16 hm5C_associated_SNPs_21795 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39853286-39853318
64251 chr11 108559729 108559729 1 + T C COAD 108559748 + 108559728 108559768 41 ATTCCTTTTTGAGAAGCCATCTGAAGAAGAAGAGCATTGTA ACTCCTTTTTGAGAAGCCATCTGAAGAAGAAGAGCATTGTA < 41bp 1 0.636632842715652 1 0.879376709461212 experiment 0.726734314568696 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX10 ENSG00000178105 CDS Human protein_coding chr11:108559748 chr11:108559729 synonymous SNV . 0 2 hm5C_associated_SNPs_21798 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:108559703-108559753
64251 chr2 99179969 99179969 1 + A G COAD 99179968 + 99179948 99179988 41 TACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGAT TACCCGCTGCTGACCACTCTCGCCGACTGCGTGGCCATGAT < 41bp 1 0.718262083390743 1 0.827971220016479 experiment 0.563475833218514 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99179968 chr2:99179969 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_21799 0 0 7 DDX24 POSTAR2 ENCODE chr2:99179915-99180002
64251 chr1 145115798 145115798 1 + A G COAD 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTGCTTGAACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0545823390427078 1 0.0908592045307159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115798 . . 0 10 hm5C_associated_SNPs_21800 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145115755-145115805
64251 chrX 41201832 41201832 1 + A G COAD 41201835 + 41201815 41201855 41 AAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATC AAATTTGAACGTGGTGGGAACAGTCGCTGGTGTGACAAATC < 41bp 1 0.199886346363723 1 0.179742872714996 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201835 chrX:41201832 synonymous SNV . 0 18 hm5C_associated_SNPs_21801 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201832 41201832 1 + A G COAD 41201839 + 41201819 41201859 41 TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT TTGAACGTGGTGGGAACAGTCGCTGGTGTGACAAATCAGAT < 41bp 1 0.736501487172302 1 0.258240938186646 experiment 0.526997025655397 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201839 chrX:41201832 synonymous SNV . 0 14 hm5C_associated_SNPs_21802 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201832 41201832 1 + A G COAD 41201850 + 41201830 41201870 41 GGAAACAGTCGCTGGTGTGACAAATCAGATGAAGATGATTG GGGAACAGTCGCTGGTGTGACAAATCAGATGAAGATGATTG < 41bp 1 0.301604919093348 1 0.562578678131104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201850 chrX:41201832 synonymous SNV . 0 3 hm5C_associated_SNPs_21803 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr8 27288527 27288527 1 + A T COAD 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAT < 41bp 1 0.709861497789623 1 0.972589492797852 experiment 0.580277004420754 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288527 nonsynonymous SNV 0.998 1 41 hm5C_associated_SNPs_21804 0 0 3 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr9 6477715 6477715 1 + C A COAD 6477719 + 6477699 6477739 41 GGTGGGAAACATGAACCCAACATGCAGCTTCTGTGTGATGA GGTGGGAAACATGAACACAACATGCAGCTTCTGTGTGATGA < 41bp 1 0.244477966169168 1 0.10742861032486 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6477719 chr9:6477715 nonsynonymous SNV 0.995 5 17 hm5C_associated_SNPs_21805 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:6477683-6477721
64251 chr2 127453545 127453545 1 + G A COAD 127453565 + 127453545 127453585 41 GTCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTA ATCCTAGTCTCCCTCCTCTTCGTCATGCTGCGCTACATGTA < 41bp 1 0.692709707064333 1 0.312312722206116 experiment 0.614580585871333 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control GYPC ENSG00000136732 CDS Human protein_coding chr2:127453565 chr2:127453545 nonsynonymous SNV 0.015 0 1 hm5C_associated_SNPs_21807 0 0 1 LIN28B POSTAR2 ENCODE chr2:127453530-127453569
64251 chr1 156105741 156105741 1 + G A COAD 156105721 + 156105701 156105741 41 AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCG AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCA < 41bp 1 0.365890492655439 1 0.288898766040802 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105721 chr1:156105741 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_21808 1 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr1 156105741 156105741 1 + G A COAD 156105730 + 156105710 156105750 41 AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA AAGCTTCGAGACCTGGAGGACTCACTGGCCCATGAGCGGGA < 41bp 1 0.278920808055111 1 0.168026775121689 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105730 chr1:156105741 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_21809 1 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr10 102114305 102114305 1 + G A COAD 102114310 + 102114290 102114330 41 GTTGGCTGCTTGTGCGCAAACACCCAGCTGTCAAAGAGAAG GTTGGCTGCTTGTGCACAAACACCCAGCTGTCAAAGAGAAG < 41bp 1 0.449560189275971 1 0.0514573752880096 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102114310 chr10:102114305 nonsynonymous SNV 0.998 4 16 hm5C_associated_SNPs_21810 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102114283-102114322
64251 chr3 52245357 52245357 1 + C T COAD 52245356 + 52245336 52245376 41 CACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTG CACGAGTTCTCTGATTGACACTGTACGGTCCTATGCTGCTG < 41bp 1 0.687230551125436 1 0.185940980911255 experiment 0.625538897749128 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245356 chr3:52245357 synonymous SNV . 0 22 hm5C_associated_SNPs_21812 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr3 52245357 52245357 1 + C T COAD 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTGATTGACACTGTACGGTCCTATGCTGCTGGCTTC < 41bp 1 0.36378057664908 1 0.356512904167175 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245357 synonymous SNV . 0 17 hm5C_associated_SNPs_21813 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr22 23615298 23615298 1 + C T COAD 23615317 + 23615297 23615337 41 ACGAGGAGCACGCTGGTCCTCCATGTAAGTCACAGCGCCCC ATGAGGAGCACGCTGGTCCTCCATGTAAGTCACAGCGCCCC < 41bp 1 0.170813258154678 1 0.0878108441829681 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23615317 chr22:23615298 nonsynonymous SNV 0.855 3 2 hm5C_associated_SNPs_21823 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23615271-23615309
64251 chr16 31131779 31131779 1 + C T COAD 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTGAGTGCAAGATCACTCGCAACCAAAAGCGCAA < 41bp 1 0.26886360007624 1 0.0538331568241119 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131779 nonsynonymous SNV 0.994 3 13 hm5C_associated_SNPs_21824 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:31131660-31131784
64251 chr16 697855 697855 1 + T C COAD 697836 + 697816 697856 41 GCCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTG GCCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGCG < 41bp 1 0.154387248548178 1 0.350325644016266 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697836 chr16:697855 nonsynonymous SNV 0.984 0 40 hm5C_associated_SNPs_21825 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr16 697855 697855 1 + T C COAD 697837 + 697817 697857 41 CCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGTGG CCCAGCCGGTGAGGGCGGGCCAAGGCCTGTGCAGTACGCGG < 41bp 1 0.700279715532955 1 0.692773461341858 experiment 0.59944056893409 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697837 chr16:697855 nonsynonymous SNV 0.984 0 39 hm5C_associated_SNPs_21826 0 0 5 DDX24 POSTAR2 ENCODE chr16:697811-697869
64251 chr2 75081444 75081444 1 + C T COAD 75081425 + 75081405 75081445 41 TTCCTCCTTTTTCAGGTTGACCAGTATCTCTACCACATGCG TTCCTCCTTTTTCAGGTTGACCAGTATCTCTACCACATGTG < 41bp 1 0.0941316991035289 1 0.0798017084598541 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK2 ENSG00000159399 CDS Human protein_coding chr2:75081425 chr2:75081444 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_21827 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:75081430-75081453
64251 chr3 184102457 184102457 1 + T C COAD 184102443 + 184102423 184102463 41 AGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACTGTGGGC AGAGCTTCGGGGGCACGTGGCTGCCCTGCCCTACCGTGGGC < 41bp 1 0.375077243498891 1 0.144035249948502 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184102443 chr3:184102457 nonsynonymous SNV 0.994 2 35 hm5C_associated_SNPs_21828 0 0 9 BUD13 POSTAR2 ENCODE chr3:184102421-184102476
64251 chr16 67914066 67914066 1 + C T COAD 67914050 + 67914030 67914070 41 AGTGGCAGCCTTCAGGCAAGCCCGCGTGGCCTCCTGCCTGG AGTGGCAGCCTTCAGGCAAGCCCGCGTGGCCTCCTGTCTGG < 41bp 1 0.600906242434176 1 0.122797429561615 experiment 0.798187515131647 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914050 chr16:67914066 nonsynonymous SNV 0.003 0 37 hm5C_associated_SNPs_21831 0 0 2 FMR1 POSTAR2 ENCODE chr16:67914039-67914077
64251 chr17 38151735 38151735 1 + G A COAD 38151726 + 38151706 38151746 41 CGAATCTCCTTGGCTGACATCGCCCAGAAGCTGCAGTTGGA CGAATCTCCTTGGCTGACATCGCCCAGAAACTGCAGTTGGA < 41bp 1 0.32261942203456 1 0.500120043754578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38151726 chr17:38151735 synonymous SNV . 0 30 hm5C_associated_SNPs_21832 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38151700-38151771
64251 chr12 69115898 69115898 1 + A G COAD 69115884 + 69115864 69115904 41 TCCCGTTGTTTCTTTTGAAGCTGGACGTTAGAAAAGGTTTT TCCCGTTGTTTCTTTTGAAGCTGGACGTTAGAAAGGGTTTT < 41bp 1 0.71249193935613 1 0.152739256620407 experiment 0.57501612128774 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69115884 chr12:69115898 nonsynonymous SNV 0.977 1 35 hm5C_associated_SNPs_21833 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69115891-69115930
64251 chr5 65466527 65466527 1 + T C COAD 65466522 + 65466502 65466542 41 AACGTGAAAAAGAAAAGGAACGGGGTAAAAACAAAGACCGG AACGTGAAAAAGAAAAGGAACGGGGCAAAAACAAAGACCGG < 41bp 1 0.747264890693105 1 0.853511810302734 experiment 0.505470218613789 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREK1 ENSG00000153914 CDS Human protein_coding chr5:65466522 chr5:65466527 synonymous SNV . 0 26 hm5C_associated_SNPs_21834 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221660 chr5:65466520-65466540
64251 chr1 218458683 218458683 1 + C T COAD 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCATGTG < 41bp 1 0.280033812575511 1 0.413143157958984 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458683 nonsynonymous SNV 0.780 2 38 hm5C_associated_SNPs_21837 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr11 65403956 65403956 1 + G A COAD 65403939 + 65403919 65403959 41 GTGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGG GTGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAATGG < 41bp 1 0.0467409918445074 1 0.210631191730499 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403939 chr11:65403956 synonymous SNV . 0 38 hm5C_associated_SNPs_21838 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403956 65403956 1 + G A COAD 65403940 + 65403920 65403960 41 TGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGC TGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAATGGC < 41bp 1 0.145006249451805 1 0.386810302734375 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403940 chr11:65403956 synonymous SNV . 0 37 hm5C_associated_SNPs_21839 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403956 65403956 1 + G A COAD 65403941 + 65403921 65403961 41 GGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCC GGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAATGGCC < 41bp 1 0.0531257420592098 1 0.157098263502121 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403941 chr11:65403956 synonymous SNV . 0 36 hm5C_associated_SNPs_21840 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403956 65403956 1 + G A COAD 65403942 + 65403922 65403962 41 GCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCT GCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAATGGCCT < 41bp 1 0.070924923828129 1 0.182521909475327 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403942 chr11:65403956 synonymous SNV . 0 35 hm5C_associated_SNPs_21841 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403956 65403956 1 + G A COAD 65403943 + 65403923 65403963 41 CTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCTC CTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAATGGCCTC < 41bp 1 0.293570003064381 1 0.346371620893478 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403943 chr11:65403956 synonymous SNV . 0 34 hm5C_associated_SNPs_21842 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr1 10479771 10479771 1 + G A DLBC 10479787 + 10479767 10479807 41 CCATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT CCATAGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT < 41bp 1 0.252297172914782 1 0.0704939663410187 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PGD ENSG00000142657 CDS Human protein_coding chr1:10479787 chr1:10479771 nonsynonymous SNV 0.809 4 5 hm5C_associated_SNPs_21849 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr2 27456274 27456274 1 + G A DLBC 27456273 + 27456253 27456293 41 ACATGGCCATGGCGTTGCATCGGCAGCAGTGCCGGGTGCTG ACATGGCCATGGCGTTGCATCAGCAGCAGTGCCGGGTGCTG < 41bp 1 0.744062100305495 1 0.608198881149292 experiment 0.511875799389009 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456273 chr2:27456274 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_21850 0 0 6 FMR1 POSTAR2 ENCODE chr2:27456265-27456307
64251 chr6 26124565 26124565 1 + C A DLBC 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCCGAGTGCACCGCCTGCTACGTAAAGGCAA < 41bp 1 0.588590160394323 1 0.152040958404541 experiment 0.822819679211353 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124565 synonymous SNV . 0 30 hm5C_associated_SNPs_21851 0 0 21 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26124528-26124572
64251 chr8 38899582 38899582 1 + C A DLBC 38899577 + 38899557 38899597 41 CTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTG CTGATGAAGCCTATAGTGCTCCCTCATGTGGTAATAAGTTG < 41bp 1 0.110068948419507 1 0.141840428113937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899577 chr8:38899582 synonymous SNV . 0 26 hm5C_associated_SNPs_21852 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr8 38899582 38899582 1 + C A DLBC 38899581 + 38899561 38899601 41 TGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG TGAAGCCTATAGTGCTCCCTCATGTGGTAATAAGTTGGTGG < 41bp 1 0.380547083099482 1 0.476463288068771 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899581 chr8:38899582 synonymous SNV . 0 22 hm5C_associated_SNPs_21853 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr3 183855505 183855505 1 + G T DLBC 183855522 + 183855502 183855542 41 GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA GATTCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA < 41bp 1 0.414598883231567 1 0.0832209289073944 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183855522 chr3:183855505 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_21854 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:183855486-183855523
64251 chr15 68583512 68583512 1 + C T DLBC 68583493 + 68583473 68583513 41 ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCG ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTTG < 41bp 1 0.223050259917725 1 0.0716131031513214 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583493 chr15:68583512 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_21856 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583512 68583512 1 + C T DLBC 68583494 + 68583474 68583514 41 TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGG TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTTGG < 41bp 1 0.431386837101075 1 0.302266150712967 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583494 chr15:68583512 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_21857 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583512 68583512 1 + C T DLBC 68583501 + 68583481 68583521 41 GAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATG GAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTTGGGCTAATG < 41bp 1 0.364282667719047 1 0.168428987264633 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583501 chr15:68583512 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_21858 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583512 68583512 1 + C T DLBC 68583502 + 68583482 68583522 41 AGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGA AGTCTCAAGTGCCTGGCTGCCCGAGCAGTTTGGGCTAATGA < 41bp 1 0.340721700448086 1 0.46021181344986 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583502 chr15:68583512 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_21859 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583512 68583512 1 + C T DLBC 68583503 + 68583483 68583523 41 GTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGAC GTCTCAAGTGCCTGGCTGCCCGAGCAGTTTGGGCTAATGAC < 41bp 1 0.481302204974707 1 0.393449932336807 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583503 chr15:68583512 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_21860 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583512 68583512 1 + C T DLBC 68583507 + 68583487 68583527 41 CAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTA CAAGTGCCTGGCTGCCCGAGCAGTTTGGGCTAATGACATTA < 41bp 1 0.219530952416824 1 0.0461897253990173 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583507 chr15:68583512 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_21861 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr11 66411319 66411319 1 + C T DLBC 66411334 + 66411314 66411354 41 TCGATCCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT TCGATTCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT < 41bp 1 0.141684827104723 1 0.0590665936470032 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411334 chr11:66411319 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_21862 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:66411280-66411340
64251 chr19 40711082 40711082 1 + G A DLBC 40711074 + 40711054 40711094 41 CGGCCAGATTTCGGTAGCATCTTGAAGCGGCTTGAAGTCAT CGGCCAGATTTCGGTAGCATCTTGAAGCAGCTTGAAGTCAT < 41bp 1 0.510553242959567 1 0.721762299537659 experiment 0.978893514080865 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40711074 chr19:40711082 nonsynonymous SNV 0.978 1 29 hm5C_associated_SNPs_21863 0 0 1 PPIG POSTAR2 ENCODE chr19:40711081-40711144
64251 chr5 139917069 139917069 1 + C T DLBC 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACCTCCCCCAATTGGAACAGAGAGACTGGCCTGAATTC < 41bp 1 0.287320946357742 1 0.518351256847382 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917069 stopgain 0.996 1 35 hm5C_associated_SNPs_21864 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139917069-139917094
64251 chr8 6302752 6302752 1 + T C DLBC 6302737 + 6302717 6302757 41 GGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGA GGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCCGAAGA < 41bp 1 0.650222379781046 1 0.111318558454514 experiment 0.699555240437908 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302737 chr8:6302752 synonymous SNV . 0 36 hm5C_associated_SNPs_21866 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr8:6302731-6302753
64251 chr19 36218067 36218067 1 + C T DLBC 36218061 + 36218041 36218081 41 TCTTCCCTTTCTCTAGGAAACTACTGCCCGATCTGTACACG TCTTCCCTTTCTCTAGGAAACTACTGTCCGATCTGTACACG < 41bp 1 0.128395328979995 1 0.146018832921982 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218061 chr19:36218067 synonymous SNV . 0 27 hm5C_associated_SNPs_21867 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr19:36218057-36218091
64251 chr19 36218067 36218067 1 + C T DLBC 36218064 + 36218044 36218084 41 TCCCTTTCTCTAGGAAACTACTGCCCGATCTGTACACGCTG TCCCTTTCTCTAGGAAACTACTGTCCGATCTGTACACGCTG < 41bp 1 0.0316365943510925 1 0.0634905397891998 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218064 chr19:36218067 synonymous SNV . 0 24 hm5C_associated_SNPs_21868 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr19:36218057-36218091
64251 chr11 6629314 6629314 1 + G A DLBC 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCA < 41bp 1 0.197427596606697 1 0.142735838890076 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629314 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_21869 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr16 57171163 57171163 1 + C G DLBC 57171175 + 57171155 57171195 41 CCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG CCGGTTTGGGGCCCAGGCCACACAACAGCGGACGGCCACGG < 41bp 1 0.689204619476191 1 0.340458512306213 experiment 0.621590761047618 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171175 chr16:57171163 nonsynonymous SNV 0.971 4 9 hm5C_associated_SNPs_21871 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr19 46878959 46878959 1 + C T DLBC 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGTGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT < 41bp 1 0.564572098683584 1 0.522122383117676 experiment 0.870855802632832 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878959 synonymous SNV . 0 3 hm5C_associated_SNPs_21872 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr19:46878936-46878959
64251 chr22 20079074 20079074 1 + C T DLBC 20079093 + 20079073 20079113 41 GCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA GTAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA < 41bp 1 0.0577504799900684 1 0.102650672197342 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079093 chr22:20079074 stopgain 0.986 1 2 hm5C_associated_SNPs_21873 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:20079052-20079074
64251 chr6 26022032 26022032 1 + C T DLBC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGTGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA < 41bp 1 0.725594142951883 1 0.354105770587921 experiment 0.548811714096235 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022032 synonymous SNV . 0 6 hm5C_associated_SNPs_21875 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr2 71651066 71651066 1 + G A DLBC 71651064 + 71651044 71651084 41 GCAGTGGAAGGATCTCAGCCCTGCAAGGCAAGCTTTCTAAA GCAGTGGAAGGATCTCAGCCCTACAAGGCAAGCTTTCTAAA < 41bp 1 0.592686843486417 1 0.244550913572311 experiment 0.814626313027165 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71651064 chr2:71651066 synonymous SNV . 0 23 hm5C_associated_SNPs_21876 0 0 1 UCHL5 POSTAR2 ENCODE chr2:71651027-71651080
64251 chr17 28766060 28766060 1 + G A DLBC 28766053 + 28766033 28766073 41 TGTATCCTAATGAATATTTTCCTCATGGAATAACAAATGGA TGTATCCTAATGAATATTTTCCTCATGAAATAACAAATGGA < 41bp 1 0.0974410682868526 1 0.296499133110046 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28766053 chr17:28766060 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_21877 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:28766002-28766078
64251 chr9 80942972 80942972 1 + C T DLBC 80942983 + 80942963 80943003 41 TCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAT TCAGTTGTCTAGTGGAGCCCCAAAATAGAAGCAAGATGAAT < 41bp 1 0.407638677365545 1 0.418498247861862 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80942983 chr9:80942972 nonsynonymous SNV 0.905 3 10 hm5C_associated_SNPs_21878 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80942930-80943008
64251 chr11 47600867 47600867 1 + C T DLBC 47600875 + 47600855 47600895 41 GAGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATG GAGGCGGGAGAGTGCCGGGGCCGACACGCGCCGTGAGTATG < 41bp 1 0.0901457766753647 1 0.126409322023392 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600875 chr11:47600867 synonymous SNV . 0 13 hm5C_associated_SNPs_21879 0 0 10 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600867 47600867 1 + C T DLBC 47600876 + 47600856 47600896 41 AGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGT AGGCGGGAGAGTGCCGGGGCCGACACGCGCCGTGAGTATGT < 41bp 1 0.766948943555594 1 0.314371943473816 experiment 0.466102112888812 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600876 chr11:47600867 synonymous SNV . 0 12 hm5C_associated_SNPs_21880 0 0 10 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600867 47600867 1 + C T DLBC 47600885 + 47600865 47600905 41 AGCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGC AGTGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGC < 41bp 1 0.292460624938251 1 0.0927632749080658 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600885 chr11:47600867 synonymous SNV . 0 3 hm5C_associated_SNPs_21881 0 0 10 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600867 47600867 1 + C T DLBC 47600886 + 47600866 47600906 41 GCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGCG GTGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGCG < 41bp 1 0.732459651378214 1 0.146098703145981 experiment 0.535080697243572 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600886 chr11:47600867 synonymous SNV . 0 2 hm5C_associated_SNPs_21882 0 0 10 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr2 202141597 202141597 1 + T A DLBC 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTGACTGATCATCAACAATCA < 41bp 1 0.377242378943362 1 0.228742122650146 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141597 stopgain 0.993 0 24 hm5C_associated_SNPs_21885 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:202141579-202141603
64251 chr22 26291160 26291160 1 + G A DLBC 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATA < 41bp 1 0.0888763790093249 1 0.341787844896317 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291160 nonsynonymous SNV 0.999 0 41 hm5C_associated_SNPs_21887 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr5 82834316 82834316 1 + T C DLBC 82834308 + 82834288 82834328 41 CACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG CACTCTCCCACGTAGTCCTGCCTCTGTCCTTATGGAGCAGG < 41bp 1 0.0194321130416327 1 0.0511967241764069 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834308 chr5:82834316 nonsynonymous SNV 0.010 0 29 hm5C_associated_SNPs_21888 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:82834300-82834320
64251 chr1 22835092 22835092 1 + G T DLBC 22835072 + 22835052 22835092 41 TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAT < 41bp 1 0.404460496027855 1 0.559640944004059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835072 chr1:22835092 stopgain 0.997 1 41 hm5C_associated_SNPs_21890 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:22835067-22835093
64251 chr15 29346718 29346718 1 + C T DLBC 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACTG < 41bp 1 0.769242665264834 1 0.33150988817215 experiment 0.461514669470332 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346718 nonsynonymous SNV 0.380 2 40 hm5C_associated_SNPs_21891 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346718 29346718 1 + C T DLBC 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACTGCCT < 41bp 1 0.675464438649119 1 0.688099086284637 experiment 0.649071122701762 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346718 nonsynonymous SNV 0.380 2 37 hm5C_associated_SNPs_21892 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr20 62521256 62521256 1 + G A DLBC 62521246 + 62521226 62521266 41 GAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG GAACGGCAGTGACAACCTCCCTTCCTCAGCAGGGAGTGGTG < 41bp 1 0.255565573749034 1 0.0535944104194641 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521246 chr20:62521256 synonymous SNV 0.004 0 31 hm5C_associated_SNPs_21893 0 0 1 TBRG4 POSTAR2 ENCODE chr20:62521205-62521257
64251 chr1 155288031 155288031 1 + C T DLBC 155288044 + 155288024 155288064 41 TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTG TGAAGCTTTATTGCCGGGAGCAGCCCTATTACCTGAACCTG < 41bp 1 0.302804959387091 1 0.216095685958862 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155288044 chr1:155288031 synonymous SNV . 0 8 hm5C_associated_SNPs_21894 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr1:155287987-155288040
64251 chr10 60549152 60549152 1 + G A DLBC 60549151 + 60549131 60549171 41 TTTCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT TTTCAGTATCATTTAAACAGCATTCCCGAATGTATGGTGCT < 41bp 1 0.00963085707602562 1 0.0253060758113861 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549151 chr10:60549152 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_21895 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60549137-60549216
64251 chr7 102937911 102937911 1 + C T DLBC 102937920 + 102937900 102937940 41 AGCAGAAATGGCGGCTGCGGCGGCTCGAGTGGTGTTGTCAT AGCAGAAATGGTGGCTGCGGCGGCTCGAGTGGTGTTGTCAT < 41bp 1 0.659003044488857 1 0.760976493358612 experiment 0.681993911022285 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PMPCB ENSG00000105819 CDS Human protein_coding chr7:102937920 chr7:102937911 nonsynonymous SNV 0.755 1 12 hm5C_associated_SNPs_21904 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:102937900-102937940
64251 chr6 30692031 30692031 1 + T C DLBC 30692018 + 30691998 30692038 41 GCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGG GCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGCACACAGG < 41bp 1 0.141489111978739 1 0.149021357297897 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30692018 chr6:30692031 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_21905 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30692020-30692080
64251 chr6 30692031 30692031 1 + T C DLBC 30692022 + 30692002 30692042 41 TGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGCGAG TGTTCCGCCGGAAGGCCTTCCTCCACTGGCACACAGGCGAG < 41bp 1 0.689397838616842 1 0.988452434539795 experiment 0.621204322766315 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30692022 chr6:30692031 nonsynonymous SNV 0.999 4 30 hm5C_associated_SNPs_21906 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30692020-30692080
64251 chr4 103806567 103806567 1 + A T DLBC 103806576 + 103806556 103806596 41 CAGCTTATTGTAGGTGTTGGCGTTCTAAAACGGTAAGATGT CAGCTTATTGTTGGTGTTGGCGTTCTAAAACGGTAAGATGT < 41bp 1 0.0770756279908166 1 0.483580112457275 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CISD2 ENSG00000145354 CDS Human protein_coding chr4:103806576 chr4:103806567 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_21908 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr4:103806552-103806580
64251 chr5 177565199 177565199 1 + C T DLBC 177565214 + 177565194 177565234 41 GTGAGCGGAGCCTGGAGGAGCTGCTGCACTACGTGGGCCAG GTGAGTGGAGCCTGGAGGAGCTGCTGCACTACGTGGGCCAG < 41bp 1 0.687121459801304 1 0.286632239818573 experiment 0.625757080397393 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RMND5B ENSG00000145916 CDS Human protein_coding chr5:177565214 chr5:177565199 nonsynonymous SNV 0.974 3 6 hm5C_associated_SNPs_21909 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:177565180-177565218
64251 chr17 3572623 3572623 1 + G A DLBC 3572638 + 3572618 3572658 41 GTCCTGCTCTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAG GTCCTACTCTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAG < 41bp 1 0.12135949186907 1 0.0597103834152222 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMC6 ENSG00000127774 CDS Human protein_coding chr17:3572638 chr17:3572623 synonymous SNV . 0 6 hm5C_associated_SNPs_21910 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:3572561-3572624
64251 chr17 79663744 79663744 1 + G A DLBC 79663761 + 79663741 79663781 41 CGCGCAGATGCCCGCCTTCCCCCTGCCCTACGCCCAGGCAT CGCACAGATGCCCGCCTTCCCCCTGCCCTACGCCCAGGCAT < 41bp 1 0.360112835837873 1 0.28675240278244 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663761 chr17:79663744 synonymous SNV . 0 4 hm5C_associated_SNPs_21912 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:79663734-79663753
64251 chr11 8016899 8016899 1 + C G DLBC 8016893 + 8016873 8016913 41 GTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAA GTTCCCGATGACTTTGAGACCATGCTGAACAGCAACATCAA < 41bp 1 0.211225570492905 1 0.153440296649933 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3F ENSG00000175390 CDS Human protein_coding chr11:8016893 chr11:8016899 synonymous SNV . 0 27 hm5C_associated_SNPs_21913 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:8016872-8016903
64251 chr19 39948337 39948337 1 + C T DLBC 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATGAGTATGAGGATGAGGACCAGTGGGAGGATGGAGCAGA < 41bp 1 0.256774489466289 1 0.108244180679321 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948337 synonymous SNV . 0 15 hm5C_associated_SNPs_21914 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948337 39948337 1 + C T DLBC 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATGAGTATGAGGATGAGGACCAGTGGGAGGATGGAGCAGAG < 41bp 1 0.509985891527622 1 0.328000962734222 experiment 0.980028216944756 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948337 synonymous SNV . 0 14 hm5C_associated_SNPs_21915 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr15 68583506 68583506 1 + G A DLBC 68583487 + 68583467 68583507 41 ACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGC ACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAAC < 41bp 1 0.708823303547749 1 0.834557175636292 experiment 0.582353392904501 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583487 chr15:68583506 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_21917 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583493 + 68583473 68583513 41 ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCG ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAACAGTTCG < 41bp 1 0.187077424078118 1 0.116756469011307 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583493 chr15:68583506 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_21918 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583494 + 68583474 68583514 41 TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGG TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAACAGTTCGG < 41bp 1 0.44099489678101 1 0.426359385251999 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583494 chr15:68583506 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_21919 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583501 + 68583481 68583521 41 GAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATG GAGTCTCAAGTGCCTGGCTGCCCGAACAGTTCGGGCTAATG < 41bp 1 0.275979455092599 1 0.195827424526215 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583501 chr15:68583506 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_21920 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583502 + 68583482 68583522 41 AGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGA AGTCTCAAGTGCCTGGCTGCCCGAACAGTTCGGGCTAATGA < 41bp 1 0.520840622796732 1 0.479408979415894 experiment 0.958318754406536 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583502 chr15:68583506 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_21921 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583503 + 68583483 68583523 41 GTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGAC GTCTCAAGTGCCTGGCTGCCCGAACAGTTCGGGCTAATGAC < 41bp 1 0.319873110484872 1 0.416632652282715 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583503 chr15:68583506 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_21922 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583507 + 68583487 68583527 41 CAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTA CAAGTGCCTGGCTGCCCGAACAGTTCGGGCTAATGACATTA < 41bp 1 0.193559104703427 1 0.0499288439750671 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583507 chr15:68583506 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_21923 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583506 68583506 1 + G A DLBC 68583512 + 68583492 68583532 41 GCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTAACTAC GCCTGGCTGCCCGAACAGTTCGGGCTAATGACATTAACTAC < 41bp 1 0.728585239306608 1 0.787673234939575 experiment 0.542829521386784 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583512 chr15:68583506 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_21924 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr3 47385186 47385186 1 + G A DLBC 47385197 + 47385177 47385217 41 CTCAGCATTGCCGAGATGTACAGCTCTGTGGCAGACCAGTG CTCAGCATTACCGAGATGTACAGCTCTGTGGCAGACCAGTG < 41bp 1 0.414297216565819 1 0.0982494652271271 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385197 chr3:47385186 nonsynonymous SNV 0.830 2 10 hm5C_associated_SNPs_21926 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47385160-47385194
64251 chr1 24996752 24996752 1 + A T DLBC 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACCGTCTACAAACTGGTCACCTGCTGTACCGGTCAAAAAGG < 41bp 1 0.539254593309607 1 0.357609987258911 experiment 0.921490813380787 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996752 synonymous SNV . 0 22 hm5C_associated_SNPs_21928 0 0 3 IGF2BP3 POSTAR2 ENCODE chr1:24996646-24996757
64251 chr1 63282305 63282305 1 + G A DLBC 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CGGGATGTACAATAGAGGATCACGTAATTGCAAGAAATGTA < 41bp 1 0.439018581868937 1 0.164164960384369 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282305 nonsynonymous SNV 0.996 1 33 hm5C_associated_SNPs_21929 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr22 23523613 23523613 1 + T C DLBC 23523630 + 23523610 23523650 41 AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC AGGCCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC < 41bp 1 0.568779583984457 1 0.0796328186988831 experiment 0.862440832031086 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23523630 chr22:23523613 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_21930 0 0 4 FMR1 POSTAR2 ENCODE chr22:23523537-23523614
64251 chrX 41075218 41075218 1 + T G DLBC 41075229 + 41075209 41075249 41 CTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTGCAAT CTAAAGCGAGTTGACTATGACTGGGAAAGAGAATGTGCAAT < 41bp 1 0.381763376502144 1 0.269764184951782 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41075229 chrX:41075218 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_21932 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41075168-41075231
64251 chr8 128751156 128751156 1 + C T ESCA 128751167 + 128751147 128751187 41 CAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGA CAGCGCCTTTTCTCCGTCCTCGGATTCTCTGCTCTCCTCGA < 41bp 1 0.597610930316552 1 0.839241206645966 experiment 0.804778139366896 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MYC ENSG00000136997 CDS Human protein_coding chr8:128751167 chr8:128751156 synonymous SNV . 0 10 hm5C_associated_SNPs_21933 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:128751109-128751186
64251 chr8 92090650 92090650 1 + A G ESCA 92090658 + 92090638 92090678 41 ATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA ATTGAAAACTTAGCAGGAGCCAGACATATGGAAAGTGAGAA < 41bp 1 0.546396978854764 1 0.616359889507294 experiment 0.907206042290472 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92090658 chr8:92090650 nonsynonymous SNV 0.979 0 13 hm5C_associated_SNPs_21934 0 0 4 GRWD1 POSTAR2 ENCODE chr8:92090593-92090765
64251 chr8 98837299 98837299 1 + G A ESCA 98837312 + 98837292 98837332 41 TTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAATGG TTGATTAACTGTGTTTGGAACTGCTACCGATACATCAATGG < 41bp 1 0.21089162907845 1 0.0541039109230042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAPTM4B ENSG00000104341 CDS Human protein_coding chr8:98837312 chr8:98837299 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_21935 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:98837280-98837300
64251 chr7 4824612 4824612 1 + G A ESCA 4824600 + 4824580 4824620 41 TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCACCCCGGGA < 41bp 1 0.12181379480591 1 0.201610207557678 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824600 chr7:4824612 synonymous SNV . 0 33 hm5C_associated_SNPs_21936 0 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr7 4824612 4824612 1 + G A ESCA 4824610 + 4824590 4824630 41 CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG CCTCTGCCGGCCGCCTGCTGCCACCCCGGGAGCGGCTTCGG < 41bp 1 0.0998877309591912 1 0.124804854393005 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824610 chr7:4824612 synonymous SNV . 0 23 hm5C_associated_SNPs_21937 0 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr16 2814594 2814594 1 + G C ESCA 2814601 + 2814581 2814621 41 TTAAAGAAGATTTGAATGGACCGTTTCTTAATCAGCTGGAA TTAAAGAAGATTTCAATGGACCGTTTCTTAATCAGCTGGAA < 41bp 1 0.025673494021465 1 0.0326643288135529 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814601 chr16:2814594 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_21938 0 0 42 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr16 2814594 2814594 1 + G C ESCA 2814613 + 2814593 2814633 41 TGAATGGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT TCAATGGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT < 41bp 1 0.302761087895637 1 0.825268268585205 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814613 chr16:2814594 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_21939 0 0 42 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr6 158492679 158492679 1 + G A ESCA 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCAG < 41bp 1 0.729116632992492 1 0.66722047328949 experiment 0.541766734015016 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492679 synonymous SNV . 0 40 hm5C_associated_SNPs_21940 0 0 4 BUD13 POSTAR2 ENCODE chr6:158492660-158492788
64251 chr17 4926854 4926854 1 + G A ESCA 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCACATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA < 41bp 1 0.0710061756540799 1 0.0309507846832275 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926854 nonsynonymous SNV 0.006 0 4 hm5C_associated_SNPs_21951 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4926836-4926861
64251 chr17 4926854 4926854 1 + G A ESCA 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC ACATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC < 41bp 1 0.080146948365823 1 0.0328373312950134 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926854 nonsynonymous SNV 0.006 0 1 hm5C_associated_SNPs_21952 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4926836-4926861
64251 chr1 24996716 24996716 1 + C A ESCA 24996696 + 24996676 24996716 41 CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCC CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCA < 41bp 1 0.351946401322481 1 0.10504737496376 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996696 chr1:24996716 synonymous SNV . 0 41 hm5C_associated_SNPs_21953 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996716 24996716 1 + C A ESCA 24996697 + 24996677 24996717 41 TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCAG < 41bp 1 0.693072561169752 1 0.164821714162827 experiment 0.613854877660496 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996697 chr1:24996716 synonymous SNV . 0 40 hm5C_associated_SNPs_21954 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996716 24996716 1 + C A ESCA 24996698 + 24996678 24996718 41 GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCAGT < 41bp 1 0.1675059440821 1 0.166186183691025 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996698 chr1:24996716 synonymous SNV . 0 39 hm5C_associated_SNPs_21955 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996716 24996716 1 + C A ESCA 24996703 + 24996683 24996723 41 AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCAGTCCAGT < 41bp 1 0.213719122847814 1 0.108638107776642 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996703 chr1:24996716 synonymous SNV . 0 34 hm5C_associated_SNPs_21956 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996716 24996716 1 + C A ESCA 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT CAGCTAAAAAGCCCCCAGCACCTCCATCCCCAGTCCAGTCT < 41bp 1 0.0528500640683693 1 0.0161938965320587 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996716 synonymous SNV . 0 32 hm5C_associated_SNPs_21957 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996716 24996716 1 + C A ESCA 24996709 + 24996689 24996729 41 TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT TAAAAAGCCCCCAGCACCTCCATCCCCAGTCCAGTCTCAGT < 41bp 1 0.0542656870700455 1 0.103119432926178 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996709 chr1:24996716 synonymous SNV . 0 28 hm5C_associated_SNPs_21958 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr17 62223488 62223488 1 + G T ESCA 62223469 + 62223449 62223489 41 ATGACATTCCAATTAAAGCACGTGTTAGACTGCTGACGCGG ATGACATTCCAATTAAAGCACGTGTTAGACTGCTGACGCTG < 41bp 1 0.388667443523564 1 0.166543364524841 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223469 chr17:62223488 . . 0 40 hm5C_associated_SNPs_21959 0 0 111 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223488 62223488 1 + G T ESCA 62223481 + 62223461 62223501 41 TTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCGAACT TTAAAGCACGTGTTAGACTGCTGACGCTGGTGATGCGAACT < 41bp 1 0.311704372759577 1 0.172475814819336 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223481 chr17:62223488 . . 0 28 hm5C_associated_SNPs_21960 0 0 111 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223488 62223488 1 + G T ESCA 62223485 + 62223465 62223505 41 AGCACGTGTTAGACTGCTGACGCGGGTGATGCGAACTGGAG AGCACGTGTTAGACTGCTGACGCTGGTGATGCGAACTGGAG < 41bp 1 0.539776241493654 1 0.138917505741119 experiment 0.920447517012692 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223485 chr17:62223488 . . 0 24 hm5C_associated_SNPs_21961 0 0 111 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223488 62223488 1 + G T ESCA 62223496 + 62223476 62223516 41 GACTGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGC GACTGCTGACGCTGGTGATGCGAACTGGAGTCTGAGCCTGC < 41bp 1 0.395850369836482 1 0.316812306642532 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223496 chr17:62223488 . . 0 13 hm5C_associated_SNPs_21962 0 0 111 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr12 57627884 57627884 1 + A G ESCA 57627865 + 57627845 57627885 41 TTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAG TTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGGG < 41bp 1 0.244153287120526 1 0.180903285741806 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627865 chr12:57627884 nonsynonymous SNV 0.731 0 40 hm5C_associated_SNPs_21964 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57627798-57627891
64251 chr20 3893116 3893116 1 + G A ESCA 3893135 + 3893115 3893155 41 GGAACTTTTTTTGGTCTCTGCTGTCTTCTTACTGGCTGTAC GAAACTTTTTTTGGTCTCTGCTGTCTTCTTACTGGCTGTAC < 41bp 1 0.118244791185157 1 0.127828240394592 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PANK2 ENSG00000125779 CDS Human protein_coding chr20:3893135 chr20:3893116 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_21965 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:3893094-3893130
64251 chrX 41198321 41198321 1 + C T ESCA 41198304 + 41198284 41198324 41 TTTAGAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAG TTTAGAAGGGCGCTATATTCCTCCTCATTTAAGGAACTGAG < 41bp 1 0.313706110648108 1 0.318354457616806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41198304 chrX:41198321 stopgain 0.987 1 38 hm5C_associated_SNPs_21966 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:41198258-41198333
64251 chr11 107966314 107966314 1 + G A ESCA 107966308 + 107966288 107966328 41 ATTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCA ATTTGGAGGTAACCACGTTTCAGCTCACTGTATTGTTTGCA < 41bp 1 0.481793966105311 1 0.554778695106506 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107966308 chr11:107966314 nonsynonymous SNV 0.994 3 27 hm5C_associated_SNPs_21968 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:107966259-107966343
64251 chrX 73042914 73042914 1 - C A ESCA 73042925 - 73042905 73042945 41 GTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGACATAT GTATTTGCTCATTGGTCTGGCTTAGAGACAGTAAGACATAT < 41bp 1 0.0549498601672807 1 0.112165689468384 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042925 chrX:73042914 . . 0 32 hm5C_associated_SNPs_21970 0 0 53 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73042914 73042914 1 - C A ESCA 73042929 - 73042909 73042949 41 AAAGGTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGAC AAAGGTATTTGCTCATTGGTCTGGCTTAGAGACAGTAAGAC < 41bp 1 0.168586121315147 1 0.219120562076569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042929 chrX:73042914 . . 0 36 hm5C_associated_SNPs_21971 0 0 53 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr6 27861281 27861281 1 + G A ESCA 27861272 + 27861252 27861292 41 GGCTAAATCTGCTCCTGCCCCCAAAAAGGGCTCCAAGAAAG GGCTAAATCTGCTCCTGCCCCCAAAAAGGACTCCAAGAAAG < 41bp 1 0.473490123466511 1 0.521930038928986 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIST1H2BO ENSG00000196331 CDS Human other chr6:27861272 chr6:27861281 nonsynonymous SNV 0.987 2 30 hm5C_associated_SNPs_21973 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27861200-27861320
64251 chr22 30416172 30416172 1 + G A ESCA 30416167 + 30416147 30416187 41 CCCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCTACAG CCCTTTTGAGACCAGAGGACCAAACATGGACAGTTCTACAG < 41bp 1 0.102020462435306 1 0.211837440729141 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416167 chr22:30416172 nonsynonymous SNV 0.002 1 26 hm5C_associated_SNPs_21974 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:30416142-30416177
64251 chrX 21869646 21869646 1 + C T ESCA 21869650 + 21869630 21869670 41 CCTGGTATAAATTTACCCGTCAATCAACTGACCTATTTCTT CCTGGTATAAATTTACTCGTCAATCAACTGACCTATTTCTT < 41bp 1 0.100235592546525 1 0.0702112019062042 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21869650 chrX:21869646 nonsynonymous SNV 0.997 5 17 hm5C_associated_SNPs_21975 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:21869634-21869659
64251 chr10 103919295 103919295 1 + G T ESCA 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGACGAGGAAGAGTAGCAAAAAAAACCCATGAAAAAT < 41bp 1 0.639619299988617 1 0.588473796844482 experiment 0.720761400022767 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919295 stopgain 0.597 0 18 hm5C_associated_SNPs_21988 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919229-103919298
64251 chr18 12725469 12725469 1 + G C ESCA 12725465 + 12725445 12725485 41 ACCCCACAGTATCTGCCTCACGGTGGAAAATACCAAGTTCT ACCCCACAGTATCTGCCTCACGGTCGAAAATACCAAGTTCT < 41bp 1 0.656699137030937 1 0.370460033416748 experiment 0.686601725938126 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12725465 chr18:12725469 nonsynonymous SNV 0.822 4 25 hm5C_associated_SNPs_21990 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:12725449-12725472
64251 chr19 5691620 5691620 1 + C G ESCA 5691613 + 5691593 5691633 41 ACTGGCCGCCATGAGGAAAGCTGCTGCCAAGAAAGACTGAG ACTGGCCGCCATGAGGAAAGCTGCTGCGAAGAAAGACTGAG < 41bp 1 0.660826074425941 1 0.425768256187439 experiment 0.678347851148118 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691613 chr19:5691620 synonymous SNV . 0 28 hm5C_associated_SNPs_21991 0 0 72 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691541-5691700
64251 chr19 5691620 5691620 1 + C G ESCA 5691640 + 5691620 5691660 41 CAAGAAAGACTGAGCCCCTCCCCTGCCCTCTCCCTGAAATA GAAGAAAGACTGAGCCCCTCCCCTGCCCTCTCCCTGAAATA < 41bp 1 0.135497028254983 1 0.0973810255527496 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691640 chr19:5691620 synonymous SNV . 0 1 hm5C_associated_SNPs_21992 0 0 72 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691541-5691700
64251 chr3 139062880 139062880 1 + C T ESCA 139062873 + 139062853 139062893 41 GTGGCTTCTGATAATCATGGCGCCCCTCGGAACAACTGTAT GTGGCTTCTGATAATCATGGCGCCCCTTGGAACAACTGTAT < 41bp 1 0.307003742734418 1 0.0518479943275452 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062873 chr3:139062880 synonymous SNV . 0 28 hm5C_associated_SNPs_21993 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:139062860-139062880
64251 chr11 68705794 68705794 1 + G A ESCA 68705792 + 68705772 68705812 41 TTCTGCCAGCTCTGCAGCCGCCGCTACTGCCTCAGCCACCA TTCTGCCAGCTCTGCAGCCGCCACTACTGCCTCAGCCACCA < 41bp 1 0.135227834021432 1 0.070393294095993 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68705792 chr11:68705794 nonsynonymous SNV 0.926 2 23 hm5C_associated_SNPs_21995 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:68705771-68705819
64251 chr21 42629162 42629162 1 + G A ESCA 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCCATCCACAAATGCACTGGTGATCGGTGCCACGGTG < 41bp 1 0.578875983335514 1 0.130164921283722 experiment 0.842248033328972 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629162 synonymous SNV . 0 20 hm5C_associated_SNPs_21996 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr2 101598834 101598834 1 + G A ESCA 101598827 + 101598807 101598847 41 CAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGTGATCCC CAGCTCTGCCTGGTCCAGGACTCCAACATCCAGGTGATCCC < 41bp 1 0.672141268807088 1 0.977090954780579 experiment 0.655717462385824 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101598827 chr2:101598834 nonsynonymous SNV 0.875 0 28 hm5C_associated_SNPs_21997 0 0 5 GRWD1 POSTAR2 ENCODE chr2:101598707-101598877
64251 chr16 1550422 1550422 1 + C T ESCA 1550440 + 1550420 1550460 41 CACGTCAGCAAGGCTGTCCTCATCTGCCTGGCGCAACTCGG CATGTCAGCAAGGCTGTCCTCATCTGCCTGGCGCAACTCGG < 41bp 1 0.355498623248697 1 0.127169132232666 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550440 chr16:1550422 synonymous SNV . 0 3 hm5C_associated_SNPs_21999 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr16:1550396-1550454
64251 chr19 47423886 47423886 1 + C T ESCA 47423901 + 47423881 47423921 41 CTTTCCAGACGCCAACATTTCAGCCCCACGGCTGTCTCTGC CTTTCTAGACGCCAACATTTCAGCCCCACGGCTGTCTCTGC < 41bp 1 0.245067250835348 1 0.640811562538147 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423901 chr19:47423886 stopgain 0.965 1 6 hm5C_associated_SNPs_22000 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47423856-47423893
64251 chr2 231931656 231931656 1 + A G ESCA 231931662 + 231931642 231931682 41 CAAACAATGTGTGGAAAATGCAGATTTGCCTGAAGGAGAAA CAAACAATGTGTGGGAAATGCAGATTTGCCTGAAGGAGAAA < 41bp 1 0.356877105887351 1 0.439303815364838 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931662 chr2:231931656 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_22003 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931640-231931660
64251 chr18 77474867 77474867 1 + C T ESCA 77474860 + 77474840 77474880 41 CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT CAGCAGTGAGTCCGAGGGCACGAAGTCTTCCTCCTCCGCCT < 41bp 1 0.580243597991803 1 0.171521097421646 experiment 0.839512804016394 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474860 chr18:77474867 synonymous SNV . 0 28 hm5C_associated_SNPs_22004 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr18 77474867 77474867 1 + C T ESCA 77474881 + 77474861 77474901 41 GAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGA GAAGTCTTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGA < 41bp 1 0.357995258029099 1 0.289858877658844 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474881 chr18:77474867 synonymous SNV . 0 7 hm5C_associated_SNPs_22005 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr16 727386 727386 1 + C T ESCA 727382 + 727362 727402 41 TGCTCTACCTGGCAGGCGTGCTGGCAGGTGAGGCAGGCGCG TGCTCTACCTGGCAGGCGTGCTGGTAGGTGAGGCAGGCGCG < 41bp 1 0.581797129393673 1 0.421425551176071 experiment 0.836405741212655 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHBDL1 ENSG00000103269 CDS Human protein_coding chr16:727382 chr16:727386 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_22007 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:727380-727400
64251 chr9 35733097 35733097 1 + C T ESCA 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGATCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT < 41bp 1 0.133004221679311 1 0.0683805346488953 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733097 synonymous SNV . 0 6 hm5C_associated_SNPs_22008 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733097 35733097 1 + C T ESCA 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGATCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG < 41bp 1 0.145008372190736 1 0.154749184846878 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733097 synonymous SNV . 0 5 hm5C_associated_SNPs_22009 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr8 104343649 104343649 1 + G A ESCA 104343630 + 104343610 104343650 41 AGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAGC AGAGCAACAATTTGCAGGTCCCCAGTTCTTCAGAACCAAAC < 41bp 1 0.244817478905627 1 0.0546992421150208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343630 chr8:104343649 nonsynonymous SNV 0.972 0 40 hm5C_associated_SNPs_22012 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr8 104343649 104343649 1 + G A ESCA 104343665 + 104343645 104343685 41 CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCC CCAAACAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCC < 41bp 1 0.496916820177834 1 0.0559030175209045 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343665 chr8:104343649 nonsynonymous SNV 0.972 0 5 hm5C_associated_SNPs_22013 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr10 112657823 112657823 1 + C T ESCA 112657840 + 112657820 112657860 41 GGTCGTCTTAAACCAGAGAGCTACTGAATATAAGAACTCTT GGTTGTCTTAAACCAGAGAGCTACTGAATATAAGAACTCTT < 41bp 1 0.219552793716729 1 0.150420188903809 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD4 ENSG00000150593 CDS Human protein_coding chr10:112657840 chr10:112657823 nonsynonymous SNV 0.998 2 4 hm5C_associated_SNPs_22016 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:112657797-112657844
64251 chr3 130672710 130672710 1 + A C ESCA 130672711 + 130672691 130672731 41 CAGCTTGACAGGTGAGACAACGCCTTGTTCTAAGGTGACAG CAGCTTGACAGGTGAGACACCGCCTTGTTCTAAGGTGACAG < 41bp 1 0.653986067054109 1 0.0651845633983612 experiment 0.692027865891781 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130672711 chr3:130672710 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_22017 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr3:130672689-130672710
64251 chr16 88779139 88779139 1 + T C ESCA 88779122 + 88779102 88779142 41 GCGGCCGTGGACAGCTTCCTCCAGCAGCAGCATGTGCTGGG GCGGCCGTGGACAGCTTCCTCCAGCAGCAGCATGTGCCGGG < 41bp 1 0.537855274474516 1 0.861091375350952 experiment 0.924289451050969 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779122 chr16:88779139 nonsynonymous SNV 0.000 1 38 hm5C_associated_SNPs_22018 0 0 1 FMR1 POSTAR2 ENCODE chr16:88779102-88779219
64251 chr20 30358170 30358170 1 + G A ESCA 30358151 + 30358131 30358171 41 ATTTCTCTACCATAGAAGATCTCTTAGGCTTTCTGCTCAGA ATTTCTCTACCATAGAAGATCTCTTAGGCTTTCTGCTCAAA < 41bp 1 0.0800953285753323 1 0.0586842000484467 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30358151 chr20:30358170 synonymous SNV . 0 40 hm5C_associated_SNPs_22020 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:30358148-30358173
64251 chr2 75104436 75104436 1 + C G ESCA 75104440 + 75104420 75104460 41 GAGACCAAAGACATCTCAGACATTGAAGGGTGAGCTTCTGG GAGACCAAAGACATCTGAGACATTGAAGGGTGAGCTTCTGG < 41bp 1 0.0965794535921015 1 0.0792575180530548 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HK2 ENSG00000159399 CDS Human protein_coding chr2:75104440 chr2:75104436 stopgain 0.905 0 17 hm5C_associated_SNPs_22021 0 0 7 BUD13 POSTAR2 ENCODE chr2:75104431-75104473
64251 chr17 18137986 18137986 1 + A G ESCA 18138006 + 18137986 18138026 41 AACAAGATTCTGTGGCGGAACTGTGAATCTGGGTAGGTCGA GACAAGATTCTGTGGCGGAACTGTGAATCTGGGTAGGTCGA < 41bp 1 0.269430322510856 1 0.497923403978348 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18138006 chr17:18137986 nonsynonymous SNV 0.998 1 1 hm5C_associated_SNPs_22022 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18137980-18138008
64251 chr19 11152145 11152145 1 + C T ESCA 11152165 + 11152145 11152185 41 CGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCT TGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCT < 41bp 1 0.374143506947602 1 0.372045189142227 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152165 chr19:11152145 nonsynonymous SNV 0.996 4 1 hm5C_associated_SNPs_22023 0 0 11 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:11152140-11152160
64251 chr15 75190056 75190056 1 + C T ESCA 75190039 + 75190019 75190059 41 AGCTTACTGAGCCGAAGGACCTGCTGATATTCCGTGCCTGC AGCTTACTGAGCCGAAGGACCTGCTGATATTCCGTGCTTGC < 41bp 1 0.579720931854541 1 0.0881657004356384 experiment 0.840558136290918 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MPI ENSG00000178802 CDS Human protein_coding chr15:75190039 chr15:75190056 synonymous SNV . 0 38 hm5C_associated_SNPs_22024 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:75190015-75190069
64251 chr3 48508870 48508870 1 + T C ESCA 48508871 + 48508851 48508891 41 AGAGCAGGGGTACCAAGGATCTTCCTCCAGTGAAGGACCCT AGAGCAGGGGTACCAAGGACCTTCCTCCAGTGAAGGACCCT < 41bp 1 0.127797609251264 1 0.11008408665657 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TREX1 ENSG00000213689 CDS Human protein_coding chr3:48508871 chr3:48508870 synonymous SNV . 0 20 hm5C_associated_SNPs_22025 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:48508865-48508915
64251 chr11 65270548 65270548 1 + G C ESCA 65270555 + 65270535 65270575 41 GATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTT GATCAAGTGGATTCAGGAGGCTGTGCTGTGTGCCAATGTTT < 41bp 1 0.461019318533416 1 0.173072129487991 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270555 chr11:65270548 . . 0 14 hm5C_associated_SNPs_22026 0 0 118 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65270460-65270560
64251 chr11 65270548 65270548 1 + G C ESCA 65270560 + 65270540 65270580 41 AGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTT AGTGGATTCAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTT < 41bp 1 0.508786892720546 1 0.246183156967163 experiment 0.982426214558908 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270560 chr11:65270548 . . 0 9 hm5C_associated_SNPs_22027 0 0 118 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65270460-65270560
64251 chr11 65270548 65270548 1 + G C ESCA 65270567 + 65270547 65270587 41 TGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAG TCAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAG < 41bp 1 0.309094900115389 1 0.140723586082458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270567 chr11:65270548 . . 0 2 hm5C_associated_SNPs_22028 0 0 118 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65270460-65270560
64251 chr22 24204366 24204366 1 + T C ESCA 24204381 + 24204361 24204401 41 ACCTCTCTATCATCAATGCCCCGACCTTGGTATGTATCCTC ACCTCCCTATCATCAATGCCCCGACCTTGGTATGTATCCTC < 41bp 1 0.0750087493235044 1 0.0487202107906342 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204381 chr22:24204366 nonsynonymous SNV 0.995 3 6 hm5C_associated_SNPs_22029 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr22 24204366 24204366 1 + T C ESCA 24204382 + 24204362 24204402 41 CCTCTCTATCATCAATGCCCCGACCTTGGTATGTATCCTCT CCTCCCTATCATCAATGCCCCGACCTTGGTATGTATCCTCT < 41bp 1 0.147442771794508 1 0.168306708335876 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204382 chr22:24204366 nonsynonymous SNV 0.995 3 5 hm5C_associated_SNPs_22030 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr22 24204366 24204366 1 + T C ESCA 24204386 + 24204366 24204406 41 TCTATCATCAATGCCCCGACCTTGGTATGTATCCTCTCTGG CCTATCATCAATGCCCCGACCTTGGTATGTATCCTCTCTGG < 41bp 1 0.501192800959586 1 0.0429338812828064 experiment 0.997614398080827 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204386 chr22:24204366 nonsynonymous SNV 0.995 3 1 hm5C_associated_SNPs_22031 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr19 52195906 52195906 1 + A G ESCA 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCG < 41bp 1 0.101028865568806 1 0.0165837109088898 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195906 . . 0 41 hm5C_associated_SNPs_22032 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195906 52195906 1 + A G ESCA 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCGC < 41bp 1 0.375969869677345 1 0.157450526952744 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195906 . . 0 40 hm5C_associated_SNPs_22033 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr15 76630258 76630258 1 + C T ESCA 76630260 + 76630240 76630280 41 GTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGACGGGA GTACCTGGACGAGACGTGTACGTGCTTCGTGAGAGACGGGA < 41bp 1 0.308327253449199 1 0.206024438142776 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630260 chr15:76630258 synonymous SNV . 0 19 hm5C_associated_SNPs_22034 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630220-76630260
64251 chr7 30661051 30661051 1 + G T ESCA 30661058 + 30661038 30661078 41 TCGTTCCTGTTATGACCTCTCCTGTCATGCACGAGCCACCA TCGTTCCTGTTATTACCTCTCCTGTCATGCACGAGCCACCA < 41bp 1 0.20005685909605 1 0.200929254293442 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30661058 chr7:30661051 nonsynonymous SNV 0.996 5 14 hm5C_associated_SNPs_22036 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:30661003-30661055
64251 chr12 8196342 8196342 1 + A G ESCA 8196351 + 8196331 8196371 41 TTTCCCGAAAGAGAAGACACCCTCCAGATGATGATGTAAGT TTTCCCGAAAGGGAAGACACCCTCCAGATGATGATGTAAGT < 41bp 1 0.0249142685225737 1 0.0906901359558105 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8196351 chr12:8196342 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_22037 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:8196305-8196343
64251 chr12 104492126 104492126 1 + G T ESCA 104492140 + 104492120 104492160 41 GAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGG GAAAGATACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGG < 41bp 1 0.458264270621265 1 0.463323950767517 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104492140 chr12:104492126 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_22038 0 0 1 FUS POSTAR2 SRX029328 chr12:104492126-104492151
64251 chr9 80858446 80858446 1 + C T ESCA 80858436 + 80858416 80858456 41 GAGTCTTCGCTATAGGAGACCTGATCTTGACTGTATGGCTG GAGTCTTCGCTATAGGAGACCTGATCTTGATTGTATGGCTG < 41bp 1 0.309104129251962 1 0.0736338496208191 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP78 ENSG00000148019 CDS Human protein_coding chr9:80858436 chr9:80858446 synonymous SNV . 0 31 hm5C_associated_SNPs_22039 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:80858438-80858466
64251 chr19 18053577 18053577 1 + C T ESCA 18053574 + 18053554 18053594 41 CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC CGGCAAGGCGCCGCGGGTGGCCATGTCCAGCAAGGTCACCC < 41bp 1 0.211061045402692 1 0.0779160559177399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053574 chr19:18053577 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_22041 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr19 18053577 18053577 1 + C T ESCA 18053575 + 18053555 18053595 41 GGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCCG GGCAAGGCGCCGCGGGTGGCCATGTCCAGCAAGGTCACCCG < 41bp 1 0.497464363322472 1 0.442425042390823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053575 chr19:18053577 nonsynonymous SNV 0.007 0 23 hm5C_associated_SNPs_22042 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18053556-18053583
64251 chr1 109773544 109773544 1 + C T ESCA 109773540 + 109773520 109773560 41 GAGGATTTGGGGTGATTGTACAGTCAGGAAGAAGTACTCTC GAGGATTTGGGGTGATTGTACAGTTAGGAAGAAGTACTCTC < 41bp 1 0.379372145448737 1 0.158663004636765 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SARS ENSG00000031698 CDS Human protein_coding chr1:109773540 chr1:109773544 synonymous SNV . 0 25 hm5C_associated_SNPs_22043 0 0 26 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109773500-109773546
64251 chr19 10823277 10823277 1 + C T ESCA 10823292 + 10823272 10823312 41 ATGTTCGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCT ATGTTTGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCT < 41bp 1 0.263341622121219 1 0.0679230988025665 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823292 chr19:10823277 synonymous SNV . 0 6 hm5C_associated_SNPs_22047 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823272-10823303
64251 chr15 91456129 91456129 1 + C T ESCA 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCTCGTGCTGCG < 41bp 1 0.682958074577971 1 0.852319836616516 experiment 0.634083850844058 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456129 nonsynonymous SNV 0.833 4 32 hm5C_associated_SNPs_22048 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:91456118-91456153
64251 chr12 6644003 6644003 1 + G T ESCA 6643991 + 6643971 6644011 41 CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAGGTGA CGCAGCCGAGCCACATCGCTCAGACACCATGGTGAAGGTGA < 41bp 1 0.251049370106281 1 0.201416909694672 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6643991 chr12:6644003 nonsynonymous SNV 0.615 0 33 hm5C_associated_SNPs_22051 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:6643973-6644010
64251 chr19 806462 806462 1 + C T ESCA 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGT < 41bp 1 0.301194210777348 1 0.0571145117282867 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806462 nonsynonymous SNV 0.010 0 41 hm5C_associated_SNPs_22052 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTG < 41bp 1 0.442108363705898 1 0.0215251743793488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806462 nonsynonymous SNV 0.010 0 40 hm5C_associated_SNPs_22053 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTGG < 41bp 1 0.475919000492258 1 0.167927891016006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806462 nonsynonymous SNV 0.010 0 39 hm5C_associated_SNPs_22054 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTGGC < 41bp 1 0.470400493520915 1 0.433876693248749 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806462 nonsynonymous SNV 0.010 0 38 hm5C_associated_SNPs_22055 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTGGCG < 41bp 1 0.719575078313046 1 0.450169682502747 experiment 0.560849843373909 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806462 nonsynonymous SNV 0.010 0 37 hm5C_associated_SNPs_22056 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTGGCGGCGG < 41bp 1 0.0668725721874232 1 0.178160905838013 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806462 nonsynonymous SNV 0.010 0 33 hm5C_associated_SNPs_22057 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806462 806462 1 + C T ESCA 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGTGGCGGCGGC < 41bp 1 0.212714379780819 1 0.183665215969086 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806462 nonsynonymous SNV 0.010 0 32 hm5C_associated_SNPs_22058 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr3 16312569 16312569 1 + C T ESCA 16312562 + 16312542 16312582 41 TGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGA TGACACTCAGCACTTTGCGCCACCTTATTCTAACCAGGTGA < 41bp 1 0.227309827298311 1 0.0677489638328552 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16312562 chr3:16312569 nonsynonymous SNV 0.026 1 28 hm5C_associated_SNPs_22059 0 0 1 GPKOW POSTAR2 ENCODE chr3:16312557-16312611
64251 chr17 4701691 4701691 1 + G T ESCA 4701676 + 4701656 4701696 41 GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCTCCGTT < 41bp 1 0.698706071520437 1 0.641962051391602 experiment 0.602587856959127 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701676 chr17:4701691 nonsynonymous SNV 0.996 0 36 hm5C_associated_SNPs_22061 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4701628-4701787
64251 chr19 10789847 10789847 1 + C T ESCA 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTCGCGTGCCCACTTGGGGTCCCCTCCGAGGCTGGGTAAGG < 41bp 1 0.0832642834037425 1 0.0820710062980652 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789847 synonymous SNV . 0 14 hm5C_associated_SNPs_22063 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr19:10789772-10789852
64251 chr19 10789847 10789847 1 + C T ESCA 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TCGCGTGCCCACTTGGGGTCCCCTCCGAGGCTGGGTAAGGC < 41bp 1 0.0360555522503535 1 0.0905439555644989 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789847 synonymous SNV . 0 13 hm5C_associated_SNPs_22064 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr19:10789772-10789852
64251 chr17 62525459 62525459 1 + C G ESCA 62525477 + 62525457 62525497 41 CTCCAGTTAACAAACACAAACAGTTCCACTTGGAGAGAAAA CTGCAGTTAACAAACACAAACAGTTCCACTTGGAGAGAAAA < 41bp 1 0.155996189585507 1 0.195197641849518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP95 ENSG00000258890 CDS Human protein_coding chr17:62525477 chr17:62525459 nonsynonymous SNV 0.481 1 3 hm5C_associated_SNPs_22065 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:62525440-62525462
64251 chr6 26204991 26204991 1 + G C ESCA 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCCTCGCGG < 41bp 1 0.625975394254436 1 0.921503782272339 experiment 0.748049211491129 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204991 nonsynonymous SNV 0.025 0 35 hm5C_associated_SNPs_22068 0 0 37 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr6 31638955 31638955 1 + G A ESCA 31638959 + 31638939 31638979 41 TTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGAC TTCCCGACATCCGGACATGCCACTTCTGCCTCGTAGAAGAC < 41bp 1 0.363361030465076 1 0.046382874250412 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638959 chr6:31638955 nonsynonymous SNV 0.196 0 17 hm5C_associated_SNPs_22069 0 0 12 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr6:31638935-31638956
64251 chr6 31638955 31638955 1 + G A ESCA 31638961 + 31638941 31638981 41 CCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCC CCCGACATCCGGACATGCCACTTCTGCCTCGTAGAAGACCC < 41bp 1 0.332648894374739 1 0.0381271541118622 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638961 chr6:31638955 nonsynonymous SNV 0.196 0 15 hm5C_associated_SNPs_22070 0 0 12 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr6:31638935-31638956
64251 chr12 53663130 53663130 1 + C A ESCA 53663114 + 53663094 53663134 41 CCCTCCATGCCTGCTTGGTGCAGTGCTCTCGCGAGGCTGCT CCCTCCATGCCTGCTTGGTGCAGTGCTCTCGCGAGGATGCT < 41bp 1 0.337971043127148 1 0.109898269176483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663114 chr12:53663130 nonsynonymous SNV 0.984 1 37 hm5C_associated_SNPs_22071 0 0 1 RBM15 POSTAR2 ENCODE chr12:53663035-53663131
64251 chr11 597555 597555 1 + G A ESCA 597568 + 597548 597588 41 TCTCCACGGCCAGGAGGGTCCAGGTGGGTGGCCCAGCCCTG TCTCCACAGCCAGGAGGGTCCAGGTGGGTGGCCCAGCCCTG < 41bp 1 0.71885910538021 1 0.793864846229553 experiment 0.562281789239579 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:597568 chr11:597555 synonymous SNV . 0 8 hm5C_associated_SNPs_22073 0 0 5 PPIG POSTAR2 ENCODE chr11:597532-597562
64251 chr14 21462709 21462709 1 + A T ESCA 21462722 + 21462702 21462742 41 GTGGTTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT GTGGTTCTGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT < 41bp 1 0.0793411261396483 1 0.015850841999054 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21462722 chr14:21462709 synonymous SNV . 0 8 hm5C_associated_SNPs_22074 0 0 3 PPIG POSTAR2 ENCODE chr14:21462703-21462719
64251 chr1 36028834 36028834 1 + G A ESCA 36028846 + 36028826 36028866 41 ACCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAG ACCTGACCATTGAAGATGGGCCCCGGGAGATCCTGATCAAG < 41bp 1 0.216109549012321 1 0.096791684627533 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028846 chr1:36028834 nonsynonymous SNV 0.107 1 9 hm5C_associated_SNPs_22075 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36028834 36028834 1 + G A ESCA 36028847 + 36028827 36028867 41 CCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGG CCTGACCATTGAAGATGGGCCCCGGGAGATCCTGATCAAGG < 41bp 1 0.308574508597665 1 0.183249324560165 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028847 chr1:36028834 nonsynonymous SNV 0.107 1 8 hm5C_associated_SNPs_22076 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36028834 36028834 1 + G A ESCA 36028848 + 36028828 36028868 41 CTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGGA CTGACCATTGAAGATGGGCCCCGGGAGATCCTGATCAAGGA < 41bp 1 0.464777922391329 1 0.464704573154449 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028848 chr1:36028834 nonsynonymous SNV 0.107 1 7 hm5C_associated_SNPs_22077 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr19 52714685 52714685 1 + G A ESCA 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CGCACCTCGGCCTACGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.390377984968584 1 0.0599322617053986 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714685 nonsynonymous SNV 0.993 4 14 hm5C_associated_SNPs_22078 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr19 52714685 52714685 1 + G A ESCA 52714695 + 52714675 52714715 41 ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT ACCTCGGCCTACGGCCTCTTCTCCGTCTGCTACCCCCGAGT < 41bp 1 0.748650143222817 1 0.892284452915192 experiment 0.502699713554366 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714695 chr19:52714685 nonsynonymous SNV 0.993 4 11 hm5C_associated_SNPs_22079 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr7 100867224 100867224 1 + G A ESCA 100867232 + 100867212 100867252 41 CTGCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCC CTGCAGGTGTCTAAAGTGGACTGTGTGAGCCTGGGCATTCC < 41bp 1 0.606549247047665 1 0.0596912205219269 experiment 0.78690150590467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867232 chr7:100867224 synonymous SNV . 0 13 hm5C_associated_SNPs_22080 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 100867224 100867224 1 + G A ESCA 100867242 + 100867222 100867262 41 CTGAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA CTAAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA < 41bp 1 0.774511257040265 1 0.265451550483704 experiment 0.45097748591947 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867242 chr7:100867224 synonymous SNV . 0 3 hm5C_associated_SNPs_22081 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr3 170110118 170110118 1 + G T ESCA 170110100 + 170110080 170110120 41 GAGGCCGATAGGCAAGAACTCCAAGATGAACTCAGACAGGA GAGGCCGATAGGCAAGAACTCCAAGATGAACTCAGACATGA < 41bp 1 0.492021411889352 1 0.322549015283585 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110100 chr3:170110118 nonsynonymous SNV 0.993 2 39 hm5C_associated_SNPs_22082 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr3 170110118 170110118 1 + G T ESCA 170110110 + 170110090 170110130 41 GGCAAGAACTCCAAGATGAACTCAGACAGGAACGGGAAGCA GGCAAGAACTCCAAGATGAACTCAGACATGAACGGGAAGCA < 41bp 1 0.598554371637362 1 0.180947780609131 experiment 0.802891256725276 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110110 chr3:170110118 nonsynonymous SNV 0.993 2 29 hm5C_associated_SNPs_22083 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr5 145641103 145641103 1 + C A ESCA 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCATAATCCAA < 41bp 1 0.379630556143979 1 0.241732627153397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641103 nonsynonymous SNV 0.956 3 33 hm5C_associated_SNPs_22084 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145641088-145641134
64251 chr1 180059910 180059910 1 + G C ESCA 180059896 + 180059876 180059916 41 ACTAACAGAGTCAGAACGTTCCAGAGGATCCCTGGAGTCTA ACTAACAGAGTCAGAACGTTCCAGAGGATCCCTGCAGTCTA < 41bp 1 0.511722223486102 1 0.480455905199051 experiment 0.976555553027796 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180059896 chr1:180059910 nonsynonymous SNV 0.899 2 35 hm5C_associated_SNPs_22088 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:180059878-180059916
64251 chr15 22945048 22945048 1 + G T ESCA 22945057 + 22945037 22945077 41 CAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC CAGGTGGTCACTGGCTCGGGCCGCCAGGAGGCCCAGAAGAC < 41bp 1 0.125491289065672 1 0.127256989479065 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22945057 chr15:22945048 synonymous SNV . 0 12 hm5C_associated_SNPs_22089 0 0 5 BUD13 POSTAR2 ENCODE chr15:22944994-22945076
64251 chr16 5121961 5121961 1 + G A ESCA 5121942 + 5121922 5121962 41 GCGCTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCGG GCGCTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCAG < 41bp 1 0.439823182806747 1 0.435712486505508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5121942 chr16:5121961 synonymous SNV . 0 40 hm5C_associated_SNPs_22090 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:5121939-5121964
64251 chr16 5121961 5121961 1 + G A ESCA 5121945 + 5121925 5121965 41 CTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCGGTGG CTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCAGTGG < 41bp 1 0.505130573023096 1 0.363696098327637 experiment 0.989738853953808 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5121945 chr16:5121961 synonymous SNV . 0 37 hm5C_associated_SNPs_22091 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:5121939-5121964
64251 chr16 5121961 5121961 1 + G A ESCA 5121946 + 5121926 5121966 41 TGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCGGTGGT TGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTAGCAGTGGT < 41bp 1 0.380840178110472 1 0.693167209625244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5121946 chr16:5121961 synonymous SNV . 0 36 hm5C_associated_SNPs_22092 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:5121939-5121964
64251 chr8 92090640 92090640 1 + T C ESCA 92090658 + 92090638 92090678 41 ATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA ATCGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA < 41bp 1 0.44332554354136 1 0.391882419586182 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92090658 chr8:92090640 synonymous SNV . 0 3 hm5C_associated_SNPs_22093 0 0 4 GRWD1 POSTAR2 ENCODE chr8:92090593-92090765
64251 chr19 13054423 13054423 1 + G A ESCA 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACAA < 41bp 1 0.634784764364257 1 0.183927237987518 experiment 0.730430471271487 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054423 nonsynonymous SNV 0.973 1 40 hm5C_associated_SNPs_22094 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054423 13054423 1 + G A ESCA 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACAAGA < 41bp 1 0.716219087333614 1 0.398428320884705 experiment 0.567561825332772 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054423 nonsynonymous SNV 0.973 1 38 hm5C_associated_SNPs_22095 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054423 13054423 1 + G A ESCA 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAACAAGACGTGGGGCGTAAC < 41bp 1 0.754873076168334 1 0.425011992454529 experiment 0.490253847663331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054423 nonsynonymous SNV 0.973 1 25 hm5C_associated_SNPs_22096 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054423 13054423 1 + G A ESCA 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGCAACAAGACGTGGGGCGTAACAAAGGTGA < 41bp 1 0.741656599936281 1 0.437646627426147 experiment 0.516686800127438 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054423 nonsynonymous SNV 0.973 1 17 hm5C_associated_SNPs_22097 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr1 200817241 200817241 1 + C A ESCA 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGGAATAACTCGTTCTATTAGTAATGAAGGA < 41bp 1 0.0876240275333686 1 0.544316470623016 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817241 synonymous SNV . 0 17 hm5C_associated_SNPs_22108 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200817234-200817252
64251 chr19 5691411 5691411 1 + G T ESCA 5691402 + 5691382 5691422 41 GCTTTGCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAG GCTTTGCCCCGTACGAGCGGCGCGCCATGTAGTTACTGAAG < 41bp 1 0.284569265115974 1 0.174855619668961 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691402 chr19:5691411 stopgain 0.953 0 30 hm5C_associated_SNPs_22109 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691331-5691461
64251 chr19 5691411 5691411 1 + G T ESCA 5691407 + 5691387 5691427 41 GCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTCTC GCCCCGTACGAGCGGCGCGCCATGTAGTTACTGAAGGTCTC < 41bp 1 0.242821499290822 1 0.117192417383194 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691407 chr19:5691411 stopgain 0.953 0 25 hm5C_associated_SNPs_22110 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691331-5691461
64251 chr19 5691411 5691411 1 + G T ESCA 5691427 + 5691407 5691447 41 CATGGAGTTACTGAAGGTCTCCAAGGACAAACGGGCCCTCA CATGTAGTTACTGAAGGTCTCCAAGGACAAACGGGCCCTCA < 41bp 1 0.390024222040496 1 0.948346257209778 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691427 chr19:5691411 stopgain 0.953 0 5 hm5C_associated_SNPs_22111 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5691331-5691461
64251 chr20 61292523 61292523 1 + C T ESCA 61292526 + 61292506 61292546 41 AAACCATCAGAGACCTGCCTCTGTAAGGACCGGAGTCGGGA AAACCATCAGAGACCTGTCTCTGTAAGGACCGGAGTCGGGA < 41bp 1 0.460953751077654 1 0.402170062065125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61292526 chr20:61292523 nonsynonymous SNV 0.719 2 18 hm5C_associated_SNPs_22113 0 0 3 PPIG POSTAR2 ENCODE chr20:61292499-61292537
64251 chr22 23596130 23596130 1 + A T ESCA 23596125 + 23596105 23596145 41 AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTCTCGGG AGCAGCAAGGGCAGGGGCAGCCGGGTTGCGCTGGTCTCGGG < 41bp 1 0.677886115924666 1 0.775119781494141 experiment 0.644227768150667 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23596125 chr22:23596130 nonsynonymous SNV 0.631 3 26 hm5C_associated_SNPs_22114 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23596122-23596160
64251 chr1 2330933 2330933 1 + C T ESCA 2330951 + 2330931 2330971 41 TCCTTCCTTAATGGAAGACTCAGGTAGGGTAGCGGCTGTGC TCTTTCCTTAATGGAAGACTCAGGTAGGGTAGCGGCTGTGC < 41bp 1 0.780321583381396 1 0.474068462848663 experiment 0.439356833237207 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RER1 ENSG00000157916 CDS Human protein_coding chr1:2330951 chr1:2330933 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_22115 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:2330929-2330953
64251 chr22 24237106 24237106 1 + G T ESCA 24237096 + 24237076 24237116 41 TACAGCAAGCTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCG TACAGCAAGCTGCTGTGCGGCCTGCTGGCCTAGCGCCTGCG < 41bp 1 0.112844389867542 1 0.0822210013866425 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237096 chr22:24237106 stopgain 0.973 1 31 hm5C_associated_SNPs_22116 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237106 24237106 1 + G T ESCA 24237109 + 24237089 24237129 41 TGTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGAC TGTGCGGCCTGCTGGCCTAGCGCCTGCGCATCAGCCCGGAC < 41bp 1 0.669682042380514 1 0.173516005277634 experiment 0.660635915238971 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237109 chr22:24237106 stopgain 0.973 1 18 hm5C_associated_SNPs_22117 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237106 24237106 1 + G T ESCA 24237117 + 24237097 24237137 41 CTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGC CTGCTGGCCTAGCGCCTGCGCATCAGCCCGGACAGGTACGC < 41bp 1 0.567583018625638 1 0.174225598573685 experiment 0.864833962748725 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237117 chr22:24237106 stopgain 0.973 1 10 hm5C_associated_SNPs_22118 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr22 24237106 24237106 1 + G T ESCA 24237120 + 24237100 24237140 41 CTGGCCGAGCGCCTGCGCATCAGCCCGGACAGGTACGCGGA CTGGCCTAGCGCCTGCGCATCAGCCCGGACAGGTACGCGGA < 41bp 1 0.524970614864057 1 0.357412576675415 experiment 0.950058770271886 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237120 chr22:24237106 stopgain 0.973 1 7 hm5C_associated_SNPs_22119 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr14 102452280 102452280 1 + G C ESCA 102452273 + 102452253 102452293 41 TCACCGCTCGCCTTCGGGATCAGCTTGGCACAGCCAAGAAT TCACCGCTCGCCTTCGGGATCAGCTTGCCACAGCCAAGAAT < 41bp 1 0.156896246316759 1 0.195873200893402 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102452273 chr14:102452280 nonsynonymous SNV 0.975 1 28 hm5C_associated_SNPs_22120 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102452251-102452282
64251 chr4 53579529 53579529 1 + G A ESCA 53579509 + 53579489 53579529 41 GAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGGAG GAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGGAA < 41bp 1 0.233550792764716 1 0.189675658941269 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579509 chr4:53579529 . . 0 41 hm5C_associated_SNPs_22121 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579529 53579529 1 + G A ESCA 53579519 + 53579499 53579539 41 TGGAAAGCTCCTCTTTGGATCCTGTCTGGAGTCACAACTGA TGGAAAGCTCCTCTTTGGATCCTGTCTGGAATCACAACTGA < 41bp 1 0.0888531349011764 1 0.28423285484314 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579519 chr4:53579529 . . 0 31 hm5C_associated_SNPs_22122 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579529 53579529 1 + G A ESCA 53579520 + 53579500 53579540 41 GGAAAGCTCCTCTTTGGATCCTGTCTGGAGTCACAACTGAA GGAAAGCTCCTCTTTGGATCCTGTCTGGAATCACAACTGAA < 41bp 1 0.106759199714655 1 0.136604875326157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579520 chr4:53579529 . . 0 30 hm5C_associated_SNPs_22123 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579529 53579529 1 + G A ESCA 53579531 + 53579511 53579551 41 CTTTGGATCCTGTCTGGAGTCACAACTGAACCAGAAAAAGT CTTTGGATCCTGTCTGGAATCACAACTGAACCAGAAAAAGT < 41bp 1 0.582844859955532 1 0.37837541103363 experiment 0.834310280088936 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579531 chr4:53579529 . . 0 19 hm5C_associated_SNPs_22124 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579529 53579529 1 + G A ESCA 53579536 + 53579516 53579556 41 GATCCTGTCTGGAGTCACAACTGAACCAGAAAAAGTTTCGT GATCCTGTCTGGAATCACAACTGAACCAGAAAAAGTTTCGT < 41bp 1 0.442063168160029 1 0.504998803138733 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579536 chr4:53579529 . . 0 14 hm5C_associated_SNPs_22125 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr6 126210540 126210540 1 + G A ESCA 126210539 + 126210519 126210559 41 TTTCTCTTGACCCAGAGGAACGAAAGAAAGCTGAGTCACAA TTTCTCTTGACCCAGAGGAACAAAAGAAAGCTGAGTCACAA < 41bp 1 0.524286506564112 1 0.498815447092056 experiment 0.951426986871776 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210539 chr6:126210540 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_22126 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:126210509-126210542
64251 chr15 40509785 40509785 1 + G T ESCA 40509796 + 40509776 40509816 41 GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGT GTGCAGCTGTATGTTTTTACCCTCAGCGGCTTTCGGACTGT < 41bp 1 0.330106641322102 1 0.0616757273674011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40509796 chr15:40509785 nonsynonymous SNV 0.995 2 10 hm5C_associated_SNPs_22127 0 0 2 RBM15 POSTAR2 ENCODE chr15:40509757-40509816
64251 chr15 40509785 40509785 1 + G T ESCA 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGTATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT < 41bp 1 0.365554031563449 1 0.582546353340149 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40509802 chr15:40509785 nonsynonymous SNV 0.995 2 4 hm5C_associated_SNPs_22128 0 0 2 RBM15 POSTAR2 ENCODE chr15:40509757-40509816
64251 chr22 42032238 42032238 1 + A G ESCA 42032243 + 42032223 42032263 41 ATATTTACGTCTTACAGGAGCTGGATAATCCAGGTCAGTAA ATATTTACGTCTTACGGGAGCTGGATAATCCAGGTCAGTAA < 41bp 1 0.72402986123915 1 0.476130306720734 experiment 0.551940277521699 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control XRCC6;XRCC6 ENSG00000196419;ENSG00000196419 exonic;splicing Human other chr22:42032243 chr22:42032238 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_22134 0 0 40 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:42032212-42032244
64251 chr19 50158059 50158059 1 + G T ESCA 50158043 + 50158023 50158063 41 CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCT CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCTGGCT < 41bp 1 0.106303238480293 1 0.125693291425705 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158043 chr19:50158059 nonsynonymous SNV 0.974 4 37 hm5C_associated_SNPs_22136 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50158055-50158070
64251 chr3 183882071 183882071 1 + G A ESCA 183882074 + 183882054 183882094 41 GCTGGTGTCAGCTGAGGGCTCACACCCAGACCCAGCCCCCT GCTGGTGTCAGCTGAGGACTCACACCCAGACCCAGCCCCCT < 41bp 1 0.337662489208882 1 0.288376331329346 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882074 chr3:183882071 nonsynonymous SNV 0.997 4 18 hm5C_associated_SNPs_22137 0 0 6 DDX24 POSTAR2 ENCODE chr3:183882052-183882107
64251 chr20 3564710 3564710 1 + A G ESCA 3564722 + 3564702 3564742 41 GGAATGGTATACGATGAGCACCTGCCCCCGTAAGTGAAAAA GGAATGGTGTACGATGAGCACCTGCCCCCGTAAGTGAAAAA < 41bp 1 0.041832730421973 1 0.177984535694122 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3564722 chr20:3564710 nonsynonymous SNV 0.994 3 9 hm5C_associated_SNPs_22138 0 0 4 BUD13 POSTAR2 ENCODE chr20:3564679-3564727
64251 chrX 153627911 153627911 1 + G A ESCA 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATAAATAT < 41bp 1 0.249648014394724 1 0.445799082517624 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627911 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_22139 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627825-153627935
64251 chr6 31708323 31708323 1 + C T ESCA 31708322 + 31708302 31708342 41 CCTCCTCCGGCTTCCCCAGCCCGGCCCCAGTGCCGGGCCCC CCTCCTCCGGCTTCCCCAGCCTGGCCCCAGTGCCGGGCCCC < 41bp 1 0.421719389813207 1 0.396922320127487 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31708322 chr6:31708323 nonsynonymous SNV 0.371 0 22 hm5C_associated_SNPs_22140 0 0 3 BUD13 POSTAR2 ENCODE chr6:31708248-31708327
64251 chr21 30715103 30715103 1 + G T ESCA 30715106 + 30715086 30715126 41 TGTCGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAGAT TGTCGTCAGAGTGGTGGTATCTCAGATTTCTGTCAGCAGAT < 41bp 1 0.719859785532351 1 0.544028222560883 experiment 0.560280428935299 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715106 chr21:30715103 synonymous SNV . 0 18 hm5C_associated_SNPs_22143 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr21 30715103 30715103 1 + G T ESCA 30715122 + 30715102 30715142 41 GGATCTCAGATTTCTGTCAGCAGATGACTGATAAATGTACT GTATCTCAGATTTCTGTCAGCAGATGACTGATAAATGTACT < 41bp 1 0.232290484834575 1 0.714759290218353 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715122 chr21:30715103 synonymous SNV . 0 2 hm5C_associated_SNPs_22144 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr15 65855215 65855215 1 + G C ESCA 65855212 + 65855192 65855232 41 CTGACTGTGCGATTCTGTATCTTGGGAAAAGGCAAGTAAGA CTGACTGTGCGATTCTGTATCTTCGGAAAAGGCAAGTAAGA < 41bp 1 0.36276845220501 1 0.129317730665207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HACD3 ENSG00000074696 CDS Human protein_coding chr15:65855212 chr15:65855215 nonsynonymous SNV 0.962 0 24 hm5C_associated_SNPs_22145 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:65855121-65855221
64251 chr1 154215741 154215741 1 + C G ESCA 154215745 + 154215725 154215765 41 TGTGTCTTCAGTGCCTCTGCCTGCGGAGAATGTGACAATCA TGTGTCTTCAGTGCCTGTGCCTGCGGAGAATGTGACAATCA < 41bp 1 0.609638791334067 1 0.394097447395325 experiment 0.780722417331867 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154215745 chr1:154215741 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_22147 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154215702-154215758
64251 chr2 232573421 232573421 1 + C G ESCA 232573427 + 232573407 232573447 41 GTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCG GTGCCCCACCATGTGAGACGCAGCCGTAGACACCAGCTCCG < 41bp 1 0.640325752114176 1 0.365342646837234 experiment 0.719348495771649 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232573427 chr2:232573421 stopgain 0.999 0 15 hm5C_associated_SNPs_22148 0 0 2 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr2 232573421 232573421 1 + C G ESCA 232573430 + 232573410 232573450 41 CCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAA CCCCACCATGTGAGACGCAGCCGTAGACACCAGCTCCGAAA < 41bp 1 0.545452027740186 1 0.300918936729431 experiment 0.909095944519628 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232573430 chr2:232573421 stopgain 0.999 0 12 hm5C_associated_SNPs_22149 0 0 2 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr2 232573421 232573421 1 + C G ESCA 232573440 + 232573420 232573460 41 TCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAA TGAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAA < 41bp 1 0.725152988391545 1 0.434954285621643 experiment 0.54969402321691 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573440 chr2:232573421 stopgain 0.999 0 2 hm5C_associated_SNPs_22150 0 0 2 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr19 45162124 45162124 1 + A G ESCA 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TCTATTGGTCCAGATGTTCCCGTGAGGTCCTTTGGCACTGT < 41bp 1 0.728767345947169 1 0.593393921852112 experiment 0.542465308105662 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162124 nonsynonymous SNV 0.000 1 13 hm5C_associated_SNPs_22151 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:45162122-45162132
64251 chr19 45162124 45162124 1 + A G ESCA 45162140 + 45162120 45162160 41 TCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG TCCAGATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG < 41bp 1 0.0274694707269061 1 0.0441912114620209 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162140 chr19:45162124 nonsynonymous SNV 0.000 1 5 hm5C_associated_SNPs_22152 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:45162122-45162132
64251 chr3 66419918 66419918 1 + A C ESCA 66419929 + 66419909 66419949 41 TGCCGCTGCAGTCACCACCCCTCTAGACGTGGCAAAGACAA TGCCGCTGCCGTCACCACCCCTCTAGACGTGGCAAAGACAA < 41bp 1 0.437824611901647 1 0.845970630645752 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control SLC25A26 ENSG00000144741 CDS Human protein_coding chr3:66419929 chr3:66419918 synonymous SNV . 0 10 hm5C_associated_SNPs_22153 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:66419905-66419934
64251 chr17 64299001 64299001 1 + C T ESCA 64298985 + 64298965 64299005 41 GGACCATGGCTGACGTTTTCCCGGGCAACGACTCCACGGCG GGACCATGGCTGACGTTTTCCCGGGCAACGACTCCATGGCG < 41bp 1 0.675925080160651 1 0.816924095153809 experiment 0.648149839678698 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64298985 chr17:64299001 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_22156 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr17:64298982-64299007
64251 chr3 196304479 196304479 1 + A C ESCA 196304496 + 196304476 196304516 41 GGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGA GGACGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGA < 41bp 1 0.729249026434008 1 0.284187436103821 experiment 0.541501947131984 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196304496 chr3:196304479 nonsynonymous SNV 0.998 2 4 hm5C_associated_SNPs_22157 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:196304478-196304503
64251 chr7 129046266 129046266 1 + G T ESCA 129046285 + 129046265 129046305 41 TGTATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAGCC TTTATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAGCC < 41bp 1 0.117911267163725 1 0.0366106331348419 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:129046285 chr7:129046266 synonymous SNV . 0 2 hm5C_associated_SNPs_22159 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:129046245-129046277
64251 chr1 168154083 168154083 1 + G T ESCA 168154103 + 168154083 168154123 41 GGGAACCTTACTTGGAGAATCTCTTAAGTTAAAGGTAAATC TGGAACCTTACTTGGAGAATCTCTTAAGTTAAAGGTAAATC < 41bp 1 0.23452677856384 1 0.0886828303337097 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TIPRL ENSG00000143155 CDS Human protein_coding chr1:168154103 chr1:168154083 nonsynonymous SNV 0.993 3 1 hm5C_associated_SNPs_22162 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:168154048-168154084
64251 chr19 41807528 41807528 1 + G A ESCA 41807534 + 41807514 41807554 41 TTTGTCCCACTGACGAGGACCTAAAAGACCGAACAATAAAG TTTGTCCCACTGACAAGGACCTAAAAGACCGAACAATAAAG < 41bp 1 0.335191764872285 1 0.181960910558701 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41807534 chr19:41807528 nonsynonymous SNV 0.996 4 15 hm5C_associated_SNPs_22166 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41807444-41807602
64251 chr3 184106421 184106421 1 + T C ESCA 184106407 + 184106387 184106427 41 CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGACGGGCCC < 41bp 1 0.20073021272677 1 0.129803776741028 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184106407 chr3:184106421 synonymous SNV . 0 35 hm5C_associated_SNPs_22167 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:184106409-184106439
64251 chrX 154005130 154005130 1 + G A ESCA 154005114 + 154005094 154005134 41 GAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTT GAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTAGTTT < 41bp 1 0.709611778620872 1 0.510643839836121 experiment 0.580776442758257 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005114 chrX:154005130 synonymous SNV . 0 37 hm5C_associated_SNPs_22169 0 0 30 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chrX 154005130 154005130 1 + G A ESCA 154005135 + 154005115 154005155 41 AAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTG AAAAGAGGTAGAATTAGTTTCTGAGTAGTGAAGGCCACTTG < 41bp 1 0.637270628817031 1 0.539683163166046 experiment 0.725458742365938 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005135 chrX:154005130 synonymous SNV . 0 16 hm5C_associated_SNPs_22170 0 0 30 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chr6 26124548 26124548 1 + C T ESCA 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCTGAGTGCACCGCCTGCTCCGTAAAGGCAA < 41bp 1 0.587472827943628 1 0.1579270362854 experiment 0.825054344112745 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124548 stopgain 0.804 0 13 hm5C_associated_SNPs_22173 0 0 37 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26124400-26124560
64251 chr13 27216440 27216440 1 + G A ESCA 27216436 + 27216416 27216456 41 AGTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAG AGTGAAGAGGAACATTGAGCCCCGACACTTGTGCCGGGGAG < 41bp 1 0.651603526382532 1 0.457972764968872 experiment 0.696792947234936 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216436 chr13:27216440 synonymous SNV . 0 25 hm5C_associated_SNPs_22174 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216440 27216440 1 + G A ESCA 27216437 + 27216417 27216457 41 GTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGC GTGAAGAGGAACATTGAGCCCCGACACTTGTGCCGGGGAGC < 41bp 1 0.0945234657365612 1 0.489723443984985 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216437 chr13:27216440 synonymous SNV . 0 24 hm5C_associated_SNPs_22175 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216440 27216440 1 + G A ESCA 27216438 + 27216418 27216458 41 TGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCT TGAAGAGGAACATTGAGCCCCGACACTTGTGCCGGGGAGCT < 41bp 1 0.434213670726278 1 0.329796999692917 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216438 chr13:27216440 synonymous SNV . 0 23 hm5C_associated_SNPs_22176 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216440 27216440 1 + G A ESCA 27216441 + 27216421 27216461 41 AGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCTCTG AGAGGAACATTGAGCCCCGACACTTGTGCCGGGGAGCTCTG < 41bp 1 0.255508848027965 1 0.0860132873058319 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216441 chr13:27216440 synonymous SNV . 0 20 hm5C_associated_SNPs_22177 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216440 27216440 1 + G A ESCA 27216450 + 27216430 27216470 41 TTGAGCCCCGGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG TTGAGCCCCGACACTTGTGCCGGGGAGCTCTGCCTGAAGGG < 41bp 1 0.739925198217992 1 0.872113823890686 experiment 0.520149603564016 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216450 chr13:27216440 synonymous SNV . 0 11 hm5C_associated_SNPs_22178 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr6 116757008 116757008 1 + T G ESCA 116756988 + 116756968 116757008 41 TTAATGCAGGGCATGAACATCCTGATCAAAACTCATTTACT TTAATGCAGGGCATGAACATCCTGATCAAAACTCATTTACG < 41bp 1 0.171655222652475 1 0.129277735948563 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DSE ENSG00000111817 CDS Human protein_coding chr6:116756988 chr6:116757008 synonymous SNV . 0 41 hm5C_associated_SNPs_22179 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr6:116756982-116757020
64251 chr1 93988967 93988967 1 + A C ESCA 93988959 + 93988939 93988979 41 AGTTAAATGACTATGCAGGACAGCGAGAAGTTGTAGCAGAA AGTTAAATGACTATGCAGGACAGCGAGACGTTGTAGCAGAA < 41bp 1 0.575677436908341 1 0.239980399608612 experiment 0.848645126183317 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:93988959 chr1:93988967 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_22180 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:93988935-93988991
64251 chr1 206858691 206858691 1 + C G ESCA 206858686 + 206858666 206858706 41 CCCCGGCGCAGCCGCCGCCGCCGCCCCCGCAGCAGTTCCCG CCCCGGCGCAGCCGCCGCCGCCGCCGCCGCAGCAGTTCCCG < 41bp 1 0.416708572400731 1 0.448826521635056 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206858686 chr1:206858691 synonymous SNV . 0 26 hm5C_associated_SNPs_22181 0 0 2 GEMIN5 POSTAR2 ENCODE chr1:206858659-206858720
64251 chr6 160481680 160481680 1 + C T ESCA 160481661 + 160481641 160481681 41 AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCG AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCTG < 41bp 1 0.184973074562655 1 0.254718065261841 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160481661 chr6:160481680 stopgain 0.930 0 40 hm5C_associated_SNPs_22183 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:160481653-160481685
64251 chr11 120317153 120317153 1 + C T ESCA 120317136 + 120317116 120317156 41 GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCCACT GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCTACT < 41bp 1 0.349677481413439 1 0.383312284946442 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120317136 chr11:120317153 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_22184 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:120317116-120317155
64251 chr1 6642271 6642271 1 + G A ESCA 6642276 + 6642256 6642296 41 GCAGCTGAGCCTGCTGAGAACAGAAAAGGTACAGCGGTGCC GCAGCTGAGCCTGCTAAGAACAGAAAAGGTACAGCGGTGCC < 41bp 1 0.764728786983071 1 0.645432651042938 experiment 0.470542426033858 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6642276 chr1:6642271 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_22185 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:6642271-6642272
64251 chr11 68125233 68125233 1 + A T ESCA 68125248 + 68125228 68125268 41 TGACCATCGACCTGGAGGAGCAGAAGCTCTACTGGGCTGAC TGACCTTCGACCTGGAGGAGCAGAAGCTCTACTGGGCTGAC < 41bp 1 0.455140885972006 1 0.73647153377533 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68125248 chr11:68125233 nonsynonymous SNV 0.997 3 6 hm5C_associated_SNPs_22186 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr11:68125197-68125236
64251 chr6 33653581 33653581 1 + G C ESCA 33653599 + 33653579 33653619 41 GTGAGAACCACAACCGGGACCTGCAGGTGAGTGCCTCGCCA GTCAGAACCACAACCGGGACCTGCAGGTGAGTGCCTCGCCA < 41bp 1 0.664419652019428 1 0.353342026472092 experiment 0.671160695961143 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33653599 chr6:33653581 nonsynonymous SNV 0.979 5 3 hm5C_associated_SNPs_22187 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:33653548-33653583
64251 chr11 46895129 46895129 1 - G A ESCA 46895143 - 46895123 46895163 41 ACACTGGGCTCTCCCCAAGGCGAGCAGACCTGAACGGCAGC ACACTGGGCTCTCCCCAAGGCGAGCAGACCTGAATGGCAGC < 41bp 1 0.19453163156714 1 0.551026880741119 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP4 ENSG00000134569 CDS Human protein_coding chr11:46895143 chr11:46895129 synonymous SNV . 0 35 hm5C_associated_SNPs_22189 0 0 1 SF3B4 POSTAR2 ENCODE chr11:46895112-46895193
64251 chr10 103912168 103912168 1 + A T ESCA 103912153 + 103912133 103912173 41 CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGATGGCG CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGTTGGCG < 41bp 1 0.378413420800392 1 0.0297959446907043 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912153 chr10:103912168 nonsynonymous SNV 0.830 3 36 hm5C_associated_SNPs_22190 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:103912122-103912178
64251 chr17 65905779 65905779 1 + C T ESCA 65905785 + 65905765 65905805 41 AATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG AATAAAAATAGAGCTTGATTCTGAAAAAGATGAGGTAAAAG < 41bp 1 0.425105024519386 1 0.726307511329651 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65905785 chr17:65905779 nonsynonymous SNV 0.945 0 15 hm5C_associated_SNPs_22191 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65905764-65905781
64251 chr19 54377333 54377333 1 + G T ESCA 54377326 + 54377306 54377346 41 CTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTT CTGCTGAAGGTGCTGGAGACCTTCGTTTCCTGCATCATCTT < 41bp 1 0.378877289600391 1 0.375383853912354 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377326 chr19:54377333 nonsynonymous SNV 0.993 4 28 hm5C_associated_SNPs_22192 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:54377297-54377349
64251 chr19 50912814 50912814 1 + G A ESCA 50912807 + 50912787 50912827 41 AGCTGGCCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTG AGCTGGCCAAGGAGACAGACCCCCTCCAGCGCCAGGTCCTG < 41bp 1 0.159349317039599 1 0.0230896174907684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912807 chr19:50912814 nonsynonymous SNV 0.993 2 28 hm5C_associated_SNPs_22193 1 0 5 DDX24 POSTAR2 ENCODE chr19:50912775-50912821
64251 chr19 50912814 50912814 1 + G A ESCA 50912813 + 50912793 50912833 41 CCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTGGATGGA CCAAGGAGACAGACCCCCTCCAGCGCCAGGTCCTGGATGGA < 41bp 1 0.426850790666138 1 0.649918854236603 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912813 chr19:50912814 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_22194 1 0 5 DDX24 POSTAR2 ENCODE chr19:50912775-50912821
64251 chr9 91930118 91930118 1 + A G ESCA 91930099 + 91930079 91930119 41 TAACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAG TAACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAGG < 41bp 1 0.601350362219801 1 0.248172223567963 experiment 0.797299275560398 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930099 chr9:91930118 synonymous SNV . 0 40 hm5C_associated_SNPs_22195 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930082-91930139
64251 chr9 91930118 91930118 1 + A G ESCA 91930100 + 91930080 91930120 41 AACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAGT AACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAGGT < 41bp 1 0.52654876797654 1 0.572045683860779 experiment 0.946902464046921 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930100 chr9:91930118 synonymous SNV . 0 39 hm5C_associated_SNPs_22196 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930082-91930139
64251 chr21 33040846 33040846 1 + C T ESCA 33040833 + 33040813 33040853 41 AGGTGGAAATGAAGAAAGTACAAAGACAGGAAACGCTGGAA AGGTGGAAATGAAGAAAGTACAAAGACAGGAAATGCTGGAA < 41bp 1 0.647242788169217 1 0.345230102539062 experiment 0.705514423661566 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SOD1 ENSG00000142168 CDS Human protein_coding chr21:33040833 chr21:33040846 synonymous SNV . 0 34 hm5C_associated_SNPs_22200 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:33040797-33040850
64251 chr12 54394172 54394172 1 + C T ESCA 54394180 + 54394160 54394200 41 GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTA GCACGTCGTGGGTGCCCGTGCCCTCTCAGTCGTCCGTGGTA < 41bp 1 0.178651469619984 1 0.047094315290451 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394180 chr12:54394172 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_22203 0 0 3 NONO POSTAR2 ENCODE chr12:54394125-54394198
64251 chr19 49964929 49964929 1 + G A ESCA 49964910 + 49964890 49964930 41 GCCCTCGTGCCCCCGGCCTCCCCGGCGCCCCTCCTCCTGGC GCCCTCGTGCCCCCGGCCTCCCCGGCGCCCCTCCTCCTGAC < 41bp 1 0.708711848019391 1 0.53389310836792 experiment 0.582576303961217 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49964910 chr19:49964929 nonsynonymous SNV 0.888 4 40 hm5C_associated_SNPs_22204 0 0 13 AKAP8L POSTAR2 ENCODE chr19:49964822-49964929
64251 chr19 36212475 36212475 1 + G T ESCA 36212461 + 36212441 36212481 41 CACAGACACAGGCTCAGCTACTGCAGCCCCTGCAGGCCTTG CACAGACACAGGCTCAGCTACTGCAGCCCCTGCATGCCTTG < 41bp 1 0.462796775735764 1 0.452970594167709 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36212461 chr19:36212475 nonsynonymous SNV 0.693 2 35 hm5C_associated_SNPs_22205 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:36212461-36212483
64251 chr2 46608780 46608780 1 + G A ESCA 46608795 + 46608775 46608815 41 AGTCCGGCCATGGTAGCCCTCTCCAACAAGCTGAAGCTGAA AGTCCAGCCATGGTAGCCCTCTCCAACAAGCTGAAGCTGAA < 41bp 1 0.712410523206036 1 0.984783411026001 experiment 0.575178953587928 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46608795 chr2:46608780 synonymous SNV . 0 6 hm5C_associated_SNPs_22206 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:46608760-46608780
64251 chr14 61275047 61275047 1 + C T ESCA 61275055 + 61275035 61275075 41 TAATGCAGTTTTCAACTTGACCAACAATGTGGATTTGGACA TAATGCAGTTTTTAACTTGACCAACAATGTGGATTTGGACA < 41bp 1 0.0614132731357404 1 0.0540232360363007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61275055 chr14:61275047 synonymous SNV . 0 13 hm5C_associated_SNPs_22207 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:61275040-61275060
64251 chr14 61275047 61275047 1 + C T ESCA 61275056 + 61275036 61275076 41 AATGCAGTTTTCAACTTGACCAACAATGTGGATTTGGACAA AATGCAGTTTTTAACTTGACCAACAATGTGGATTTGGACAA < 41bp 1 0.707741175370179 1 0.322123140096664 experiment 0.584517649259643 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61275056 chr14:61275047 synonymous SNV . 0 12 hm5C_associated_SNPs_22208 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:61275040-61275060
64251 chr19 48833676 48833676 1 + C T ESCA 48833670 + 48833650 48833690 41 TTCGCCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAG TTCGCCCTGGCCTGGGTGGCCTTCCCTCTCGCCCTGGTCAG < 41bp 1 0.403652969583138 1 0.0373515486717224 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833670 chr19:48833676 nonsynonymous SNV 0.994 0 27 hm5C_associated_SNPs_22209 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr19 48833676 48833676 1 + C T ESCA 48833674 + 48833654 48833694 41 CCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGC CCCTGGCCTGGGTGGCCTTCCCTCTCGCCCTGGTCAGCGGC < 41bp 1 0.252016222942733 1 0.186535805463791 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833674 chr19:48833676 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_22210 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr19 48833676 48833676 1 + C T ESCA 48833679 + 48833659 48833699 41 GCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGCATCAT GCCTGGGTGGCCTTCCCTCTCGCCCTGGTCAGCGGCATCAT < 41bp 1 0.799250624946621 1 0.203355193138123 experiment 0.401498750106758 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833679 chr19:48833676 nonsynonymous SNV 0.994 0 18 hm5C_associated_SNPs_22211 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr6 30312963 30312963 1 + G A ESCA 30312944 + 30312924 30312964 41 CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTGA CGGGAGGCCCTGGAGCGCGGCGGTGATGGCGGGGCCGGTAA < 41bp 1 0.553666201961373 1 0.523993194103241 experiment 0.892667596077255 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPP21 ENSG00000241370 CDS Human protein_coding chr6:30312944 chr6:30312963 synonymous SNV . 0 40 hm5C_associated_SNPs_22212 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:30312960-30312980
64251 chr19 42793154 42793154 1 + C T ESCA 42793148 + 42793128 42793168 41 GCTACACACAGTTGGGGGACCTGGCTCAGCCCGGCCCCGAG GCTACACACAGTTGGGGGACCTGGCTTAGCCCGGCCCCGAG < 41bp 1 0.683246763500597 1 0.847815215587616 experiment 0.633506472998806 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIC ENSG00000079432 CDS Human protein_coding chr19:42793148 chr19:42793154 nonsynonymous SNV 0.998 2 27 hm5C_associated_SNPs_22213 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr19:42793128-42793155
64251 chr19 42793154 42793154 1 + C T ESCA 42793173 + 42793153 42793193 41 TCAGCCCGGCCCCGAGCTTTCTCCCACAGCGGGGTACACAG TTAGCCCGGCCCCGAGCTTTCTCCCACAGCGGGGTACACAG < 41bp 1 0.487692445284336 1 0.233020633459091 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIC ENSG00000079432 CDS Human protein_coding chr19:42793173 chr19:42793154 nonsynonymous SNV 0.998 2 2 hm5C_associated_SNPs_22214 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr19:42793128-42793155
64251 chr1 230379135 230379135 1 + G C ESCA 230379152 + 230379132 230379172 41 AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA AATCAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA < 41bp 1 0.0769070817871455 1 0.109193712472916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230379152 chr1:230379135 nonsynonymous SNV 0.996 1 4 hm5C_associated_SNPs_22215 0 0 3 RPS3 POSTAR2 ENCODE chr1:230379127-230379174
64251 chr12 31244709 31244709 1 + C A ESCA 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGAAT < 41bp 1 0.192997781270083 1 0.083298921585083 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244709 synonymous SNV . 0 39 hm5C_associated_SNPs_22216 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr3 188242454 188242454 1 + G T ESCA 188242472 + 188242452 188242492 41 GGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCA GGTGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCA < 41bp 1 0.200686123813346 1 0.0292876064777374 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPP ENSG00000145012 CDS Human protein_coding chr3:188242472 chr3:188242454 nonsynonymous SNV 0.798 0 3 hm5C_associated_SNPs_22217 0 0 2 PPIG POSTAR2 ENCODE chr3:188242450-188242511
64251 chr1 164790798 164790798 1 + A G ESCA 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCGGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG < 41bp 1 0.725199861822806 1 0.334543377161026 experiment 0.549600276354388 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790798 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_22221 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:164790780-164790800
64251 chr22 31592935 31592935 1 + C G ESCA 31592933 + 31592913 31592953 41 CTGTTTCAGAGAGAAGACCCCTCCTCGTCCTCAAGGACAGA CTGTTTCAGAGAGAAGACCCCTGCTCGTCCTCAAGGACAGA < 41bp 1 0.14560189424962 1 0.0799185931682587 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF185 ENSG00000138942 CDS Human protein_coding chr22:31592933 chr22:31592935 nonsynonymous SNV 0.976 5 23 hm5C_associated_SNPs_22222 0 0 1 U2AF2 POSTAR2 ENCODE chr22:31592903-31592950
64251 chr1 214794199 214794199 1 + T G ESCA 214794185 + 214794165 214794205 41 TGGGGAACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAA TGGGGAACAAGAGGTGACTCCAAGTCGATCAACTGTGCAAA < 41bp 1 0.307751373033303 1 0.269824922084808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794185 chr1:214794199 nonsynonymous SNV 0.050 0 35 hm5C_associated_SNPs_22225 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr1 214794199 214794199 1 + T G ESCA 214794190 + 214794170 214794210 41 AACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAATAGGG AACAAGAGGTGACTCCAAGTCGATCAACTGTGCAAATAGGG < 41bp 1 0.0917175114371709 1 0.331129282712936 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794190 chr1:214794199 nonsynonymous SNV 0.050 0 30 hm5C_associated_SNPs_22226 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr5 159437612 159437612 1 + C T ESCA 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TACTCAGGAAGTCGAGTGTGCTGGCCCTCCAGTTCCTGATC < 41bp 1 0.703197016588063 1 0.231090366840363 experiment 0.593605966823874 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437612 nonsynonymous SNV 0.419 0 12 hm5C_associated_SNPs_22227 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159437582-159437613
64251 chr17 36920394 36920394 1 + A T ESCA 36920409 + 36920389 36920429 41 CCACCAGGACACTGAAGGCCCGAATGGACTAACCCTGTTCC CCACCTGGACACTGAAGGCCCGAATGGACTAACCCTGTTCC < 41bp 1 0.411668648169754 1 0.322823584079742 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMB3 ENSG00000108294 CDS Human other chr17:36920409 chr17:36920394 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_22228 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:36920371-36920436
64251 chr5 167826550 167826550 1 + C A ESCA 167826565 + 167826545 167826585 41 AAGAGCGTGGCTTTCAGACCCTGAAGAAGTAAGTACACCCT AAGAGAGTGGCTTTCAGACCCTGAAGAAGTAAGTACACCCT < 41bp 1 0.689706833514335 1 0.243661314249039 experiment 0.62058633297133 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WWC1 ENSG00000113645 CDS Human protein_coding chr5:167826565 chr5:167826550 nonsynonymous SNV 0.998 1 6 hm5C_associated_SNPs_22230 0 0 3 BUD13 POSTAR2 ENCODE chr5:167826521-167826588
64251 chr7 100731162 100731162 1 + G C ESCA 100731170 + 100731150 100731190 41 AGTTGCTGTGCAGAGAGTGCCGCCTAGACCCCCACCTGGAC AGTTGCTGTGCACAGAGTGCCGCCTAGACCCCCACCTGGAC < 41bp 1 0.439951647096409 1 0.251378029584885 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731170 chr7:100731162 nonsynonymous SNV 0.872 0 13 hm5C_associated_SNPs_22231 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:100731160-100731180
64251 chr10 81841630 81841630 1 + C G ESCA 81841623 + 81841603 81841643 41 GTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGGCC GTCTTCTGGCCTCAGAGTATCCCTTATGAGAACCTTGGGCC < 41bp 1 0.332282959665424 1 0.0382408201694489 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM254 ENSG00000133678 CDS Human protein_coding chr10:81841623 chr10:81841630 nonsynonymous SNV 0.995 0 28 hm5C_associated_SNPs_22232 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:81841619-81841665
64251 chr2 74154136 74154136 1 + C T ESCA 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCATGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA < 41bp 1 0.696025515297146 1 0.260513305664062 experiment 0.607948969405709 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154136 synonymous SNV . 0 8 hm5C_associated_SNPs_22234 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr2 74154136 74154136 1 + C T ESCA 74154151 + 74154131 74154171 41 CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG CTGCATGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG < 41bp 1 0.753946190982638 1 0.373765468597412 experiment 0.492107618034724 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154151 chr2:74154136 synonymous SNV . 0 6 hm5C_associated_SNPs_22235 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr2 74154136 74154136 1 + C T ESCA 74154152 + 74154132 74154172 41 TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC TGCATGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC < 41bp 1 0.762007967054815 1 0.607613861560822 experiment 0.47598406589037 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154152 chr2:74154136 synonymous SNV . 0 5 hm5C_associated_SNPs_22236 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr20 49195805 49195805 1 + G T ESCA 49195806 + 49195786 49195826 41 CAGACAGCCGACCAGCTGCGCTTCTCCTACCTGGCTGTGAT CAGACAGCCGACCAGCTGCTCTTCTCCTACCTGGCTGTGAT < 41bp 1 0.132615021486289 1 0.0461380779743195 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195806 chr20:49195805 nonsynonymous SNV 0.998 5 20 hm5C_associated_SNPs_22237 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:49195783-49195819
64251 chr12 131488770 131488770 1 + C T ESCA 131488788 + 131488768 131488808 41 TTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA TTTCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA < 41bp 1 0.253299661630018 1 0.507368445396423 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488788 chr12:131488770 nonsynonymous SNV 0.001 0 3 hm5C_associated_SNPs_22239 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr11 65396307 65396307 1 + G C ESCA 65396293 + 65396273 65396313 41 CCTTGACTGTGGCTCAGACTCGGCCATGCTGTTCGTCCAGG CCTTGACTGTGGCTCAGACTCGGCCATGCTGTTCCTCCAGG < 41bp 1 0.614576995930354 1 0.671729505062103 experiment 0.770846008139292 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65396293 chr11:65396307 nonsynonymous SNV 0.896 0 35 hm5C_associated_SNPs_22240 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65396286-65396307
64251 chr12 109547654 109547654 1 + G A ESCA 109547637 + 109547617 109547657 41 TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAGACG TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAAACG < 41bp 1 0.56227013972678 1 0.326792150735855 experiment 0.875459720546441 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547637 chr12:109547654 synonymous SNV . 0 38 hm5C_associated_SNPs_22241 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr12 109547654 109547654 1 + G A ESCA 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TACAAACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG < 41bp 1 0.0403853448991574 1 0.0626024603843689 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547654 synonymous SNV . 0 5 hm5C_associated_SNPs_22242 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr9 135933335 135933335 1 + G A ESCA 135933325 + 135933305 135933345 41 GACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGAC GACTTCAAGCCATCCGACGGCAGTGAAAACAAAATGGAGAC < 41bp 1 0.394413984263412 1 0.476774007081985 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135933325 chr9:135933335 nonsynonymous SNV 0.969 4 31 hm5C_associated_SNPs_22244 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:135933321-135933376
64251 chr3 111705797 111705797 1 + C T ESCA 111705815 + 111705795 111705835 41 TGCTTCATGCTGCAATTGCACGACCAGAGAAGGTCGTGGCT TGTTTCATGCTGCAATTGCACGACCAGAGAAGGTCGTGGCT < 41bp 1 0.541116306921714 1 0.172331631183624 experiment 0.917767386156573 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111705815 chr3:111705797 nonsynonymous SNV 0.997 0 3 hm5C_associated_SNPs_22245 0 0 1 SF3B4 POSTAR2 ENCODE chr3:111705709-111705798
64251 chr20 48568670 48568670 1 + G A ESCA 48568680 + 48568660 48568700 41 CTCCATCATCGACCAGTGAGCAGAGTCCGTGCTTGCTATCT CTCCATCATCAACCAGTGAGCAGAGTCCGTGCTTGCTATCT < 41bp 1 0.63769188045972 1 0.558053612709045 experiment 0.724616239080561 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF114 ENSG00000124226 CDS Human protein_coding chr20:48568680 chr20:48568670 nonsynonymous SNV 0.475 5 11 hm5C_associated_SNPs_22246 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:48568628-48568673
64251 chr10 103826768 103826768 1 + C A ESCA 103826778 + 103826758 103826798 41 TTTCCAAGCCCTTCCTACAGCAGCCTGGGGTGCCACCCTCA TTTCCAAGCCATTCCTACAGCAGCCTGGGGTGCCACCCTCA < 41bp 1 0.432438856029263 1 0.0674305856227875 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103826778 chr10:103826768 nonsynonymous SNV 0.149 1 11 hm5C_associated_SNPs_22247 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:103826760-103826780
64251 chr1 155032745 155032745 1 + T C ESCA 155032751 + 155032731 155032771 41 GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG GTCCTGGTGATGCTCGGTGCCAGCTACTGGTACCGTGCCCG < 41bp 1 0.576613660839941 1 0.621900320053101 experiment 0.846772678320117 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032751 chr1:155032745 synonymous SNV . 0 15 hm5C_associated_SNPs_22248 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155032744-155032779
64251 chr20 31021423 31021423 1 + C T ESCA 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCTGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT < 41bp 1 0.589061275385292 1 0.213987827301025 experiment 0.821877449229416 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021423 synonymous SNV . 0 8 hm5C_associated_SNPs_22249 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31021423 31021423 1 + C T ESCA 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCTGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG < 41bp 1 0.511709333909223 1 0.298884570598602 experiment 0.976581332181553 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021423 synonymous SNV . 0 7 hm5C_associated_SNPs_22250 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr11 124502084 124502084 1 + C T ESCA 124502089 + 124502069 124502109 41 GTAGATACTCACCTGCAGCACTTGAAGTCTCCATCACAGGG GTAGATACTCACCTGTAGCACTTGAAGTCTCCATCACAGGG < 41bp 1 0.61557069857651 1 0.126835942268372 experiment 0.768858602846979 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502089 chr11:124502084 stopgain 0.970 1 16 hm5C_associated_SNPs_22251 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:124502042-124502095
64251 chr8 56864612 56864612 1 + G A ESCA 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGACTATTACATCTCTCCACGAATCACTTTTCCCT < 41bp 1 0.670144617929983 1 0.884369552135468 experiment 0.659710764140034 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864612 nonsynonymous SNV 0.987 5 9 hm5C_associated_SNPs_22252 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr21 38117396 38117396 1 + C A ESCA 38117415 + 38117395 38117435 41 CCGGCGAACACTGCTAGGCACAGCCTGGTGCCAAGCTACGA CAGGCGAACACTGCTAGGCACAGCCTGGTGCCAAGCTACGA < 41bp 1 0.22860253695606 1 0.136603862047195 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SIM2 ENSG00000159263 CDS Human protein_coding chr21:38117415 chr21:38117396 nonsynonymous SNV 0.029 3 2 hm5C_associated_SNPs_22253 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr21:38117380-38117400
64251 chr6 35438036 35438036 1 + G A ESCA 35438048 + 35438028 35438068 41 TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAAC TAAATAAGACAGGAAAGTTCCCTTCCCTGCTCACACACAAC < 41bp 1 0.0203224405684487 1 0.1176997423172 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438048 chr6:35438036 nonsynonymous SNV 0.992 2 9 hm5C_associated_SNPs_22254 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:35437991-35438039
64251 chr19 36229256 36229256 1 + G A ESCA 36229257 + 36229237 36229277 41 ATGCATGGCAATGCCGCCCGCTTCATCAACCACTCCTGTGA ATGCATGGCAATGCCGCCCACTTCATCAACCACTCCTGTGA < 41bp 1 0.211272608364465 1 0.629633903503418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36229257 chr19:36229256 nonsynonymous SNV 0.996 5 20 hm5C_associated_SNPs_22255 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36229237-36229263
64251 chr1 150483621 150483621 1 + C T ESCA 150483635 + 150483615 150483655 41 TATTCCCGCTGCTGCCACTGCCGCAGCCACACAAACCGCCT TATTCCTGCTGCTGCCACTGCCGCAGCCACACAAACCGCCT < 41bp 1 0.609705853642638 1 0.65549099445343 experiment 0.780588292714723 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ECM1 ENSG00000143369 CDS Human protein_coding chr1:150483635 chr1:150483621 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_22256 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:150483613-150483634
64251 chr11 57428888 57428888 1 + C T ESCA 57428893 + 57428873 57428913 41 CTCATCATGGATATCCGGTTCATGGATCTGAAGTAGAGATC CTCATCATGGATATCTGGTTCATGGATCTGAAGTAGAGATC < 41bp 1 0.513579276322726 1 0.139786899089813 experiment 0.972841447354548 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428893 chr11:57428888 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_22257 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57428863-57428895
64251 chrX 48564745 48564745 1 + C T ESCA 48564763 + 48564743 48564783 41 GACGTGTACACCGTGGATGCCGCCTACTATGGCAACATCTC GATGTGTACACCGTGGATGCCGCCTACTATGGCAACATCTC < 41bp 1 0.30496785499508 1 0.40756493806839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564763 chrX:48564745 nonsynonymous SNV . 0 3 hm5C_associated_SNPs_22259 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48564704-48564754
64251 chr18 60645905 60645905 1 + C T ESCA 60645885 + 60645865 60645905 41 TGAACATGGTGATCAAGGATCGGCCCTCAGATGGGCTGGGC TGAACATGGTGATCAAGGATCGGCCCTCAGATGGGCTGGGT < 41bp 1 0.218996598014387 1 0.211518287658691 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60645885 chr18:60645905 synonymous SNV . 0 41 hm5C_associated_SNPs_22260 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:60645894-60645919
64251 chr8 145166383 145166383 1 + G A ESCA 145166367 + 145166347 145166387 41 CCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGG CCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCAAAGG < 41bp 1 0.43879615897149 1 0.211789488792419 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166367 chr8:145166383 synonymous SNV . 0 37 hm5C_associated_SNPs_22261 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr8 145166383 145166383 1 + G A ESCA 145166369 + 145166349 145166389 41 ATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAG ATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCAAAGGAG < 41bp 1 0.62304240811526 1 0.698193490505219 experiment 0.75391518376948 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166369 chr8:145166383 synonymous SNV . 0 35 hm5C_associated_SNPs_22262 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr8 145166383 145166383 1 + G A ESCA 145166382 + 145166362 145166402 41 AACATCTCAGCACCTGGTGCCGAAGGAGGTGGGGTGGGTCC AACATCTCAGCACCTGGTGCCAAAGGAGGTGGGGTGGGTCC < 41bp 1 0.25180444773896 1 0.840234518051147 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166382 chr8:145166383 synonymous SNV . 0 22 hm5C_associated_SNPs_22263 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr5 179147423 179147423 1 + A G ESCA 179147414 + 179147394 179147434 41 TACCTCCGTAGGGATGAAGACATGGATGGAGAATGGGAGGC TACCTCCGTAGGGATGAAGACATGGATGGGGAATGGGAGGC < 41bp 1 0.593221857738931 1 0.492015987634659 experiment 0.813556284522138 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179147414 chr5:179147423 synonymous SNV . 0 30 hm5C_associated_SNPs_22274 0 0 35 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179147420-179147460
64251 chr15 81221497 81221497 1 + G T ESCA 81221501 + 81221481 81221521 41 TTGGACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGT TTGGACCATAGCGGAATGACCCTCCCTATAGGCCAGTAGGT < 41bp 1 0.0208800044730045 1 0.0357131063938141 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221501 chr15:81221497 nonsynonymous SNV 0.956 4 17 hm5C_associated_SNPs_22276 0 0 1 SRSF1 POSTAR2 ENCODE chr15:81221422-81221514
64251 chr15 81221497 81221497 1 + G T ESCA 81221505 + 81221485 81221525 41 ACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC ACCATAGCGGAATGACCCTCCCTATAGGCCAGTAGGTTTGC < 41bp 1 0.0229154405166437 1 0.366643965244293 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221505 chr15:81221497 nonsynonymous SNV 0.956 4 13 hm5C_associated_SNPs_22277 0 0 1 SRSF1 POSTAR2 ENCODE chr15:81221422-81221514
64251 chr22 40661412 40661412 1 + G A ESCA 40661395 + 40661375 40661415 41 TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGAAT TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGAAAT < 41bp 1 0.139406533034156 1 0.090355396270752 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40661395 chr22:40661412 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_22278 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40661385-40661416
64251 chr7 2472427 2472427 1 + G T ESCA 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACGGGGCCGCCGCTGCCCACTCCCGGGCCG < 41bp 1 0.521433130520896 1 0.107947736978531 experiment 0.957133738958208 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472427 synonymous SNV . 0 32 hm5C_associated_SNPs_22279 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472427 2472427 1 + G T ESCA 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCCGCTGCCCACTCCCGGGCCGGACAGGGACAGGGAGCTCA < 41bp 1 0.374545074144506 1 0.224633902311325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472427 synonymous SNV . 0 13 hm5C_associated_SNPs_22280 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chrX 153677073 153677073 1 + G C ESCA 153677085 + 153677065 153677105 41 CTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG CTGCGGCACGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG < 41bp 1 0.624446682325769 1 0.620571196079254 experiment 0.751106635348462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FAM50A ENSG00000071859 CDS Human protein_coding chrX:153677085 chrX:153677073 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_22281 0 0 6 RBFOX2 POSTAR2 ENCODE chrX:153677067-153677091
64251 chr2 30756135 30756135 1 + G C ESCA 30756147 + 30756127 30756167 41 TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT TCAGATTGCAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT < 41bp 1 0.641279070356255 1 0.589769780635834 experiment 0.71744185928749 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30756147 chr2:30756135 nonsynonymous SNV 0.897 1 9 hm5C_associated_SNPs_22283 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:30756031-30756147
64251 chr22 32889259 32889259 1 + G A ESCA 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTATATCTGCGTAATTTTCGAGGTGAT < 41bp 1 0.587747585050685 1 0.338546276092529 experiment 0.824504829898629 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889259 nonsynonymous SNV 0.994 4 27 hm5C_associated_SNPs_22286 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:32889226-32889265
64251 chr20 57289051 57289051 1 + A G ESCA 57289032 + 57289012 57289052 41 AACAGCGCTGAGTGGGAGGCCGCCTGTGTGAAGGCGGGCAG AACAGCGCTGAGTGGGAGGCCGCCTGTGTGAAGGCGGGCGG < 41bp 1 0.771555655765922 1 0.717571556568146 experiment 0.456888688468156 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289032 chr20:57289051 nonsynonymous SNV 0.467 2 40 hm5C_associated_SNPs_22287 0 0 6 BUD13 POSTAR2 ENCODE chr20:57289047-57289095
64251 chr5 169015490 169015490 1 + G A ESCA 169015481 + 169015461 169015501 41 AAGAGGCTGAAGAAGAGCGACTAAAAGCTGCACAGTATGGT AAGAGGCTGAAGAAGAGCGACTAAAAGCTACACAGTATGGT < 41bp 1 0.429038262409548 1 0.296162486076355 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169015481 chr5:169015490 nonsynonymous SNV 0.891 4 30 hm5C_associated_SNPs_22289 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr5:169015460-169015505
64251 chr10 5955768 5955768 1 + A G ESCA 5955758 + 5955738 5955778 41 TATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAGTTAA TATCTTCAGGAGAATTCCTGCACTCAGGCCGCAAAAGTTAA < 41bp 1 0.0551108007095293 1 0.0674555897712708 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5955758 chr10:5955768 nonsynonymous SNV 0.640 0 31 hm5C_associated_SNPs_22297 0 0 2 SMNDC1 POSTAR2 ENCODE chr10:5955700-5955803
64251 chr3 127775657 127775657 1 + G T ESCA 127775667 + 127775647 127775687 41 CCAAAAGACCGAGCTCTCTTCAACGGAGCCCAAAAGTGTAA CCAAAAGACCTAGCTCTCTTCAACGGAGCCCAAAAGTGTAA < 41bp 1 0.489881276476571 1 0.26829269528389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127775667 chr3:127775657 nonsynonymous SNV 0.995 2 11 hm5C_associated_SNPs_22298 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr3:127775633-127775678
64251 chr9 139753531 139753531 1 + C T ESCA 139753528 + 139753508 139753548 41 TGTGGGGCGCAGGCGGGCATCGGCGGCACCAGTGGCTGGAG TGTGGGGCGCAGGCGGGCATCGGTGGCACCAGTGGCTGGAG < 41bp 1 0.775153033337564 1 0.928479611873627 experiment 0.449693933324873 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139753528 chr9:139753531 nonsynonymous SNV 0.313 2 24 hm5C_associated_SNPs_22299 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:139753504-139753532
64251 chr17 900388 900388 1 + G A ESCA 900378 + 900358 900398 41 GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC GAGGGTTGCTTGGGCAGCGACTGTCATGGCAGCGGCCGCCC < 41bp 1 0.573024315825979 1 0.301787912845612 experiment 0.853951368348043 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900378 chr17:900388 synonymous SNV . 0 31 hm5C_associated_SNPs_22300 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:900380-900400
64251 chr1 109643003 109643003 1 + G C ESCA 109642983 + 109642963 109643003 41 CCCCTGCGCCCCTCCTCCCGCTTACACTTTGATCTTATTTG CCCCTGCGCCCCTCCTCCCGCTTACACTTTGATCTTATTTC < 41bp 1 0.0565278823628178 1 0.0972627997398376 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642983 chr1:109643003 . . 0 41 hm5C_associated_SNPs_22301 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109642987 + 109642967 109643007 41 TGCGCCCCTCCTCCCGCTTACACTTTGATCTTATTTGATCG TGCGCCCCTCCTCCCGCTTACACTTTGATCTTATTTCATCG < 41bp 1 0.192925589899402 1 0.0293286740779877 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642987 chr1:109643003 . . 0 37 hm5C_associated_SNPs_22302 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109642989 + 109642969 109643009 41 CGCCCCTCCTCCCGCTTACACTTTGATCTTATTTGATCGGA CGCCCCTCCTCCCGCTTACACTTTGATCTTATTTCATCGGA < 41bp 1 0.263687517335586 1 0.0330907106399536 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642989 chr1:109643003 . . 0 35 hm5C_associated_SNPs_22303 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109642996 + 109642976 109643016 41 CCTCCCGCTTACACTTTGATCTTATTTGATCGGATCGTGAC CCTCCCGCTTACACTTTGATCTTATTTCATCGGATCGTGAC < 41bp 1 0.222882184756564 1 0.0148472785949707 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642996 chr1:109643003 . . 0 28 hm5C_associated_SNPs_22304 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109643006 + 109642986 109643026 41 ACACTTTGATCTTATTTGATCGGATCGTGACCCCAGCCCCG ACACTTTGATCTTATTTCATCGGATCGTGACCCCAGCCCCG < 41bp 1 0.527722091844874 1 0.77061665058136 experiment 0.944555816310251 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643006 chr1:109643003 . . 0 18 hm5C_associated_SNPs_22305 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109643011 + 109642991 109643031 41 TTGATCTTATTTGATCGGATCGTGACCCCAGCCCCGCCGGG TTGATCTTATTTCATCGGATCGTGACCCCAGCCCCGCCGGG < 41bp 1 0.518625414318075 1 0.390009582042694 experiment 0.962749171363851 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643011 chr1:109643003 . . 0 13 hm5C_associated_SNPs_22306 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109643018 + 109642998 109643038 41 TATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCC TATTTCATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCC < 41bp 1 0.338923836018433 1 0.337153613567352 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643018 chr1:109643003 . . 0 6 hm5C_associated_SNPs_22307 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109643019 + 109642999 109643039 41 ATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCG ATTTCATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCG < 41bp 1 0.581992388636385 1 0.339597940444946 experiment 0.83601522272723 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643019 chr1:109643003 . . 0 5 hm5C_associated_SNPs_22308 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643003 109643003 1 + G C ESCA 109643023 + 109643003 109643043 41 GATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAAT CATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAAT < 41bp 1 0.303028341433566 1 0.135653018951416 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643023 chr1:109643003 . . 0 1 hm5C_associated_SNPs_22309 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chrX 53114916 53114916 1 + C G ESCA 53114930 + 53114910 53114950 41 ACAATTCATGACATCAAGATCTCTGACTTCATGGAGACCAC ACAATTGATGACATCAAGATCTCTGACTTCATGGAGACCAC < 41bp 1 0.446772069161873 1 0.314709007740021 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53114930 chrX:53114916 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_22311 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:53114894-53114921
64251 chr20 57480483 57480483 1 + C T ESCA 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA GAGGATGAAGGAGTGTGTGCCTGCTACGAACGCTCCAACGA < 41bp 1 0.521042189273757 1 0.36413511633873 experiment 0.957915621452485 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480483 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_22312 0 0 36 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr9 135947058 135947058 1 + C A ESCA 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCACCTGTGCC < 41bp 1 0.694102562606043 1 0.831680178642273 experiment 0.611794874787915 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947058 synonymous SNV . 0 33 hm5C_associated_SNPs_22313 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr2 217364062 217364062 1 + A T ESCA 217364052 + 217364032 217364072 41 GGGACCCGCTATGGGGCCTCCCTCCGGAAAATGGTGAAGAA GGGACCCGCTATGGGGCCTCCCTCCGGAAATTGGTGAAGAA < 41bp 1 0.110667542628645 1 0.190938293933868 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364052 chr2:217364062 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_22330 0 0 43 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:217363980-217364100
64251 chr22 32889257 32889257 1 + G C ESCA 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTATATCTGCCTGATTTTCGAGGTGAT < 41bp 1 0.289535369509558 1 0.1242555975914 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889257 nonsynonymous SNV 0.975 4 25 hm5C_associated_SNPs_22331 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:32889226-32889265
64251 chr9 125154752 125154752 1 + G A ESCA 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAAGACCTGTCCCTACATTTCCTTCCGTGTGCCGGATGCCA < 41bp 1 0.0190368045035736 1 0.0271171033382416 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154752 nonsynonymous SNV 0.992 3 17 hm5C_associated_SNPs_22346 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr7 128119326 128119326 1 + G A ESCA 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATTCCCTGAGCTGGCACCTAACCAAAATCAAAATCATT < 41bp 1 0.0511773227798958 1 0.0862061977386475 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119326 nonsynonymous SNV 0.938 0 24 hm5C_associated_SNPs_22347 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr15 29346720 29346720 1 + C A ESCA 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGACT < 41bp 1 0.668681098207398 1 0.756133317947388 experiment 0.662637803585205 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346720 synonymous SNV . 0 39 hm5C_associated_SNPs_22350 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr15:29346720-29346740
64251 chr1 12061834 12061834 1 + C G ESCA 12061838 + 12061818 12061858 41 CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTCAAGTGAGGA CCTCCTAGGGGGCGCTGTCGCAGAAGGCTTTCAAGTGAGGA < 41bp 1 0.749231016835958 1 0.749988198280334 experiment 0.501537966328083 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061838 chr1:12061834 nonsynonymous SNV 0.998 3 17 hm5C_associated_SNPs_22353 0 0 1 FXR2 POSTAR2 ENCODE chr1:12061825-12061840
64251 chr19 7676676 7676676 1 + G A ESCA 7676663 + 7676643 7676683 41 GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCT GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGAACAGCCT < 41bp 1 0.257946613322667 1 0.106263846158981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676663 chr19:7676676 nonsynonymous SNV 0.648 2 34 hm5C_associated_SNPs_22354 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr6 158870089 158870089 1 + C T ESCA 158870090 + 158870070 158870110 41 TGCCACGGCAGAATGCTGGCCCACGTCCTCTTGCACGAGTC TGCCACGGCAGAATGCTGGTCCACGTCCTCTTGCACGAGTC < 41bp 1 0.175551842505789 1 0.115646094083786 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158870090 chr6:158870089 nonsynonymous SNV 0.996 4 20 hm5C_associated_SNPs_22355 0 0 1 GRWD1 POSTAR2 ENCODE chr6:158870031-158870092
64251 chr1 109643014 109643014 1 + G A ESCA 109642996 + 109642976 109643016 41 CCTCCCGCTTACACTTTGATCTTATTTGATCGGATCGTGAC CCTCCCGCTTACACTTTGATCTTATTTGATCGGATCGTAAC < 41bp 1 0.220684252098262 1 0.0240156650543213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642996 chr1:109643014 . . 0 39 hm5C_associated_SNPs_22356 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643006 + 109642986 109643026 41 ACACTTTGATCTTATTTGATCGGATCGTGACCCCAGCCCCG ACACTTTGATCTTATTTGATCGGATCGTAACCCCAGCCCCG < 41bp 1 0.516552904794701 1 0.458073079586029 experiment 0.966894190410598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643006 chr1:109643014 . . 0 29 hm5C_associated_SNPs_22357 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643011 + 109642991 109643031 41 TTGATCTTATTTGATCGGATCGTGACCCCAGCCCCGCCGGG TTGATCTTATTTGATCGGATCGTAACCCCAGCCCCGCCGGG < 41bp 1 0.323185275699469 1 0.136850923299789 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643011 chr1:109643014 . . 0 24 hm5C_associated_SNPs_22358 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643018 + 109642998 109643038 41 TATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCC TATTTGATCGGATCGTAACCCCAGCCCCGCCGGGCCGACCC < 41bp 1 0.399214092244818 1 0.400532275438309 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643018 chr1:109643014 . . 0 17 hm5C_associated_SNPs_22359 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643019 + 109642999 109643039 41 ATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCG ATTTGATCGGATCGTAACCCCAGCCCCGCCGGGCCGACCCG < 41bp 1 0.590035124499388 1 0.405888706445694 experiment 0.819929751001224 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643019 chr1:109643014 . . 0 16 hm5C_associated_SNPs_22360 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643023 + 109643003 109643043 41 GATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAAT GATCGGATCGTAACCCCAGCCCCGCCGGGCCGACCCGAAAT < 41bp 1 0.29634080338266 1 0.206756502389908 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643023 chr1:109643014 . . 0 12 hm5C_associated_SNPs_22361 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643025 + 109643005 109643045 41 TCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGA TCGGATCGTAACCCCAGCCCCGCCGGGCCGACCCGAAATGA < 41bp 1 0.650392150887186 1 0.466456562280655 experiment 0.699215698225627 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643025 chr1:109643014 . . 0 10 hm5C_associated_SNPs_22362 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643027 + 109643007 109643047 41 GGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAA GGATCGTAACCCCAGCCCCGCCGGGCCGACCCGAAATGAAA < 41bp 1 0.356816960265359 1 0.355398207902908 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643027 chr1:109643014 . . 0 8 hm5C_associated_SNPs_22363 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643028 + 109643008 109643048 41 GATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAA GATCGTAACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAA < 41bp 1 0.608654435115792 1 0.557649970054626 experiment 0.782691129768417 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643028 chr1:109643014 . . 0 7 hm5C_associated_SNPs_22364 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643014 109643014 1 + G A ESCA 109643033 + 109643013 109643053 41 TGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCT TAACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCT < 41bp 1 0.128309046267526 1 0.155891358852386 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643033 chr1:109643014 . . 0 2 hm5C_associated_SNPs_22365 0 0 75 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr11 65396125 65396125 1 + C T ESCA 65396110 + 65396090 65396130 41 CGTTTCGTGCTGACCTACATCGCGCCCTGGCAGATCACCTG CGTTTCGTGCTGACCTACATCGCGCCCTGGCAGATTACCTG < 41bp 1 0.433044810846526 1 0.640671253204346 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65396110 chr11:65396125 synonymous SNV . 0 36 hm5C_associated_SNPs_22366 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr11:65396122-65396144
64251 chr19 42373777 42373777 1 + A G ESCA 42373769 + 42373749 42373789 41 TGACCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTCA TGACCCTTCCCTCCCCACAGCGGCCGCAGACTGACACCTCA < 41bp 1 0.240821123054564 1 0.515654385089874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373769 chr19:42373777 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_22367 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:42373760-42373780
64251 chr19 42373777 42373777 1 + A G ESCA 42373772 + 42373752 42373792 41 CCCTTCCCTCCCCACAGCGGCCGCAAACTGACACCTCAGGG CCCTTCCCTCCCCACAGCGGCCGCAGACTGACACCTCAGGG < 41bp 1 0.272776445471914 1 0.329760789871216 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373772 chr19:42373777 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_22368 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:42373760-42373780
64251 chr19 42373777 42373777 1 + A G ESCA 42373779 + 42373759 42373799 41 CTCCCCACAGCGGCCGCAAACTGACACCTCAGGGACAAAGA CTCCCCACAGCGGCCGCAGACTGACACCTCAGGGACAAAGA < 41bp 1 0.285635627974022 1 0.288530349731445 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373779 chr19:42373777 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_22369 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:42373760-42373780
64251 chr19 42373777 42373777 1 + A G ESCA 42373785 + 42373765 42373805 41 ACAGCGGCCGCAAACTGACACCTCAGGGACAAAGAGATCTG ACAGCGGCCGCAGACTGACACCTCAGGGACAAAGAGATCTG < 41bp 1 0.359666391216999 1 0.138155162334442 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373785 chr19:42373777 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_22370 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:42373760-42373780
64251 chr19 42373777 42373777 1 + A G ESCA 42373794 + 42373774 42373814 41 GCAAACTGACACCTCAGGGACAAAGAGATCTGGACAGAATC GCAGACTGACACCTCAGGGACAAAGAGATCTGGACAGAATC < 41bp 1 0.300405187164097 1 0.30560439825058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373794 chr19:42373777 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_22371 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:42373760-42373780
64251 chr17 28712032 28712032 1 + G A ESCA 28712048 + 28712028 28712068 41 GCATGGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATGATT GCATAGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATGATT < 41bp 1 0.416070794278813 1 0.253881633281708 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28712048 chr17:28712032 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_22372 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr17:28712007-28712041
64251 chr5 176524671 176524671 1 + G T ESCA 176524669 + 176524649 176524689 41 TCCCCTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAG TCCCCTTCGGGTCTGGGGTGCATACATGAGCAAGGCTCAAG < 41bp 1 0.0770851397452896 1 0.0638401210308075 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524669 chr5:176524671 nonsynonymous SNV 0.399 1 23 hm5C_associated_SNPs_22373 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr10 43292443 43292443 1 + C A ESCA 43292423 + 43292403 43292443 41 AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGA < 41bp 1 0.233061858323458 1 0.175612837076187 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292423 chr10:43292443 nonsynonymous SNV 0.824 1 41 hm5C_associated_SNPs_22374 0 0 17 TARDBP POSTAR2 DRA001158,DRS012386 chr10:43292438-43292459
64251 chr5 139866549 139866549 1 + C T ESCA 139866547 + 139866527 139866567 41 TGAGTTGACTTTTTAGGTGCCACGTGTGCCAACGCATACAC TGAGTTGACTTTTTAGGTGCCATGTGTGCCAACGCATACAC < 41bp 1 0.221807295679892 1 0.123194843530655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139866547 chr5:139866549 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_22375 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:139866539-139866560
64251 chr4 5733348 5733348 1 + G T ESCA 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCCGCACCTTCCTCCTGGTGAACGCCTTCCC < 41bp 1 0.0391483449968735 1 0.0601702630519867 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733348 nonsynonymous SNV 0.026 1 26 hm5C_associated_SNPs_22376 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr12 105519884 105519884 1 + G T ESCA 105519876 + 105519856 105519896 41 ATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG ATTTGCACATAGTATTCGGTCAATTTTTTCAAATGTAGAAG < 41bp 1 0.148390203048411 1 0.100989192724228 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519876 chr12:105519884 nonsynonymous SNV 0.999 0 29 hm5C_associated_SNPs_22377 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519884 105519884 1 + G T ESCA 105519885 + 105519865 105519905 41 TAGTATTCGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG TAGTATTCGGTCAATTTTTTCAAATGTAGAAGCCAAACTTG < 41bp 1 0.413908290532244 1 0.760771095752716 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519885 chr12:105519884 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_22378 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519884 105519884 1 + G T ESCA 105519898 + 105519878 105519918 41 ATTTTTGCAAATGTAGAAGCCAAACTTGGTAATGTAAATCG ATTTTTTCAAATGTAGAAGCCAAACTTGGTAATGTAAATCG < 41bp 1 0.166367082343042 1 0.0910443365573883 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519898 chr12:105519884 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_22379 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519884 105519884 1 + G T ESCA 105519902 + 105519882 105519922 41 TTGCAAATGTAGAAGCCAAACTTGGTAATGTAAATCGCATT TTTCAAATGTAGAAGCCAAACTTGGTAATGTAAATCGCATT < 41bp 1 0.490069387763752 1 0.109992235898972 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519902 chr12:105519884 nonsynonymous SNV 0.999 0 3 hm5C_associated_SNPs_22380 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr17 3629174 3629174 1 + G C ESCA 3629168 + 3629148 3629188 41 AGGCATCACTGCGCTTTGAGCACCGAGACTTACACTGGGGG AGGCATCACTGCGCTTTGAGCACCGACACTTACACTGGGGG < 41bp 1 0.406806924430453 1 0.417111665010452 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HASPIN ENSG00000177602 CDS Human protein_coding chr17:3629168 chr17:3629174 nonsynonymous SNV 1.000 5 27 hm5C_associated_SNPs_22384 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:3629160-3629180
64251 chr18 13056017 13056017 1 + A T ESCA 13056028 + 13056008 13056048 41 CTTCCTCCAAAAGTGGAAATCTGTTGGAAACCAGTGAGGTA CTTCCTCCATAAGTGGAAATCTGTTGGAAACCAGTGAGGTA < 41bp 1 0.192513642394026 1 0.334879875183105 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056028 chr18:13056017 nonsynonymous SNV 0.577 4 10 hm5C_associated_SNPs_22385 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056001-13056039
64251 chr1 173454551 173454551 1 + A G ESCA 173454543 + 173454523 173454563 41 AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATA AGAGCCCACAGAAAAGTTACCTTTTCCCGTCATCGATGATA < 41bp 1 0.0788600619242509 1 0.0266428291797638 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454543 chr1:173454551 nonsynonymous SNV 0.998 2 29 hm5C_associated_SNPs_22386 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173454502-173454552
64251 chr8 145151572 145151572 1 + T A GBM 145151587 + 145151567 145151607 41 TCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGCCATG TCTACATCAACCCCTACTTTCCTGGCCAGGCCATTGCCATG < 41bp 1 0.31516858157247 1 0.129632145166397 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151587 chr8:145151572 nonsynonymous SNV 0.998 4 6 hm5C_associated_SNPs_22388 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145151552-145151581
64251 chr9 33295248 33295248 1 + C A GBM 33295260 + 33295240 33295280 41 AGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGAC AGGATGACATCAATGAAAGACCAGCAAAATCTACCTGTGAC < 41bp 1 0.129014140738161 1 0.293101668357849 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295260 chr9:33295248 nonsynonymous SNV 0.741 0 9 hm5C_associated_SNPs_22392 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33295213-33295249
64251 chr9 33295248 33295248 1 + C A GBM 33295261 + 33295241 33295281 41 GGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACA GGATGACATCAATGAAAGACCAGCAAAATCTACCTGTGACA < 41bp 1 0.688270435894032 1 0.129570722579956 experiment 0.623459128211936 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295261 chr9:33295248 nonsynonymous SNV 0.741 0 8 hm5C_associated_SNPs_22393 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33295213-33295249
64251 chr10 70666637 70666637 1 + C A GBM 70666624 + 70666604 70666644 41 AGAAGGATTTAATAGACTTTCAGATGAATTCTCCAAATCTC AGAAGGATTTAATAGACTTTCAGATGAATTCTCAAAATCTC < 41bp 1 0.485641862764847 1 0.533185601234436 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX50 ENSG00000107625 CDS Human protein_coding chr10:70666624 chr10:70666637 synonymous SNV . 0 34 hm5C_associated_SNPs_22395 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70666614-70666681
64251 chr13 24858276 24858276 1 + C T GBM 24858291 + 24858271 24858311 41 AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGG AGTTTTTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGG < 41bp 1 0.147422786356976 1 0.267778396606445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24858291 chr13:24858276 nonsynonymous SNV 0.972 0 6 hm5C_associated_SNPs_22396 0 0 1 DGCR8 POSTAR2 ENCODE chr13:24858276-24858286
64251 chr3 39127018 39127018 1 + G A GBM 39127026 + 39127006 39127046 41 TGAATTTAGGAGGACTTTTACTCCAAGCACTCCTGGAATAT TGAATTTAGGAGAACTTTTACTCCAAGCACTCCTGGAATAT < 41bp 1 0.731470717712788 1 0.927609384059906 experiment 0.537058564574423 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control WDR48 ENSG00000114742 CDS Human protein_coding chr3:39127026 chr3:39127018 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_22397 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:39127012-39127041
64251 chr6 7594065 7594065 1 + T A GBM 7594067 + 7594047 7594087 41 ATTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCAT ATTGAGGAAAATGGGCTAAACCAAAGAAGAAGAGGTACCAT < 41bp 1 0.514977913735632 1 0.394603967666626 experiment 0.970044172528736 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594067 chr6:7594065 stopgain 0.994 1 19 hm5C_associated_SNPs_22399 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr6 7594065 7594065 1 + T A GBM 7594068 + 7594048 7594088 41 TTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCATA TTGAGGAAAATGGGCTAAACCAAAGAAGAAGAGGTACCATA < 41bp 1 0.621469011372945 1 0.662728905677795 experiment 0.75706197725411 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594068 chr6:7594065 stopgain 0.994 1 18 hm5C_associated_SNPs_22400 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr7 100200148 100200148 1 + C T GBM 100200134 + 100200114 100200154 41 CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGCCCAGGGC CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGCTCAGGGC < 41bp 1 0.270781605816162 1 0.154189974069595 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100200134 chr7:100200148 synonymous SNV . 0 35 hm5C_associated_SNPs_22401 0 0 1 RPS3 POSTAR2 ENCODE chr7:100200037-100200172
64251 chr3 40499435 40499435 1 + C T GBM 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGCCGGGTGGCCTATGTCTCCTTTGGACCTTATGCCGGAAA < 41bp 1 0.34338788516336 1 0.0951830446720123 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499435 nonsynonymous SNV 0.997 0 31 hm5C_associated_SNPs_22410 0 0 2 SUB1 POSTAR2 ENCODE chr3:40499432-40499483
64251 chr12 31236915 31236915 1 + C A GBM 31236904 + 31236884 31236924 41 GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCACGAGGCCTG < 41bp 1 0.716132320294317 1 0.441344380378723 experiment 0.567735359411366 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31236904 chr12:31236915 nonsynonymous SNV 0.006 0 32 hm5C_associated_SNPs_22411 0 0 4 GRWD1 POSTAR2 ENCODE chr12:31236877-31236930
64251 chr2 120005512 120005512 1 + G T GBM 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTTCCCGTGTCCGTGGTCAAC < 41bp 1 0.0934054193104632 1 0.0142217874526978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005512 synonymous SNV . 0 23 hm5C_associated_SNPs_22412 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr1 87208016 87208016 1 + C A GBM 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTCTCCTTACAACCTCAGTGACCTTAAGGAGTGTAG < 41bp 1 0.29512193078751 1 0.307823657989502 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208016 nonsynonymous SNV 0.982 0 14 hm5C_associated_SNPs_22413 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:87207995-87208025
64251 chr12 109604769 109604769 1 + C T GBM 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACATGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG < 41bp 1 0.538423168062154 1 0.726835191249847 experiment 0.923153663875691 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604769 nonsynonymous SNV 0.972 3 6 hm5C_associated_SNPs_22414 0 0 2 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr19 11559895 11559895 1 + T C GBM 11559894 + 11559874 11559914 41 CCCTGTGTCTCTCACAGCACCTGGGGCTCATGGATTGGCCC CCCTGTGTCTCTCACAGCACCCGGGGCTCATGGATTGGCCC < 41bp 1 0.524703646265194 1 0.818843245506287 experiment 0.950592707469612 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559894 chr19:11559895 nonsynonymous SNV 0.979 3 22 hm5C_associated_SNPs_22417 0 0 7 GEMIN5 POSTAR2 ENCODE chr19:11559890-11559906
64251 chr1 29069013 29069013 1 + G A GBM 29069000 + 29068980 29069020 41 CTCCTATTCTTTGGGTGAAGCTGCTTGGTCTACGGGGGGTG CTCCTATTCTTTGGGTGAAGCTGCTTGGTCTACAGGGGGTG < 41bp 1 0.462592745903147 1 0.263247966766357 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069000 chr1:29069013 synonymous SNV . 0 34 hm5C_associated_SNPs_22418 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr9 130569495 130569495 1 + G T GBM 130569510 + 130569490 130569530 41 TGGCAGCTGTGTCTCCATGCCCCCCTACTTCCGCTTCCTGA TGGCATCTGTGTCTCCATGCCCCCCTACTTCCGCTTCCTGA < 41bp 1 0.0873673089599582 1 0.0568917989730835 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FPGS ENSG00000136877 CDS Human protein_coding chr9:130569510 chr9:130569495 nonsynonymous SNV 0.968 0 6 hm5C_associated_SNPs_22420 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:130569411-130569508
64251 chr22 32881138 32881138 1 + C T GBM 32881149 + 32881129 32881169 41 TCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGC TCCTCTCTGTGAGGGCAGCTCCGCTACTCTCACCTGTGTGC < 41bp 1 0.46377989017603 1 0.123495310544968 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881149 chr22:32881138 synonymous SNV . 0 10 hm5C_associated_SNPs_22421 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr5 53815370 53815370 1 + G T GBM 53815367 + 53815347 53815387 41 TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC TAGCGCTGTATCAGGGGCATCTGTCTAACTTCCCGGACATC < 41bp 1 0.107631797969547 1 0.0899492800235748 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815367 chr5:53815370 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_22423 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:53815344-53815374
64251 chr1 27105938 27105938 1 + A G GBM 27105939 + 27105919 27105959 41 TGGCGGATTGGTGGGGGGGACACCACTGAGCATATCCAGAC TGGCGGATTGGTGGGGGGGGCACCACTGAGCATATCCAGAC < 41bp 1 0.673655430508104 1 0.366248369216919 experiment 0.652689138983791 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27105939 chr1:27105938 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_22424 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:27105900-27105938
64251 chr16 56970708 56970708 1 + C T GBM 56970702 + 56970682 56970722 41 GGAAGTTCTTCGGAACCTTTCTTCCCCTGGATGGGAAAACA GGAAGTTCTTCGGAACCTTTCTTCCCTTGGATGGGAAAACA < 41bp 1 0.278900664623936 1 0.32782781124115 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56970702 chr16:56970708 nonsynonymous SNV 0.969 0 27 hm5C_associated_SNPs_22426 0 0 14 BUD13 POSTAR2 ENCODE chr16:56970689-56970759
64251 chr1 32502583 32502583 1 + C A GBM 32502589 + 32502569 32502609 41 TACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGC TACCTGAACCCTCTAGTGGACGTGGGGTGCCAGTGAGAGGC < 41bp 1 0.769215512729897 1 0.581679940223694 experiment 0.461568974540206 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502589 chr1:32502583 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_22427 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr1 32502583 32502583 1 + C A GBM 32502598 + 32502578 32502618 41 CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT CCTCTAGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT < 41bp 1 0.613940531029756 1 0.397175878286362 experiment 0.772118937940489 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502598 chr1:32502583 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_22428 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chrX 21874899 21874899 1 + C T GBM 21874912 + 21874892 21874932 41 TAGGCAACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGC TAGGCAATGACTTGGAGGACCAGTTGGCCCTCCCGGATAGC < 41bp 1 0.19138977747055 1 0.16290557384491 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control YY2 ENSG00000230797 CDS Human protein_coding chrX:21874912 chrX:21874899 synonymous SNV . 0 8 hm5C_associated_SNPs_22429 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:21874868-21874899
64251 chr5 162932707 162932707 1 + G A GBM 162932723 + 162932703 162932743 41 GGGAGAAAGAGCTCTCTATACACTTTGTTCCCGGGAGCTGT GGGAAAAAGAGCTCTCTATACACTTTGTTCCCGGGAGCTGT < 41bp 1 0.475371195883393 1 0.0518599450588226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAT2B ENSG00000038274 CDS Human protein_coding chr5:162932723 chr5:162932707 synonymous SNV . 0 5 hm5C_associated_SNPs_22430 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:162932680-162932707
64251 chr17 30692370 30692370 1 + G A GBM 30692372 + 30692352 30692392 41 TGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT TGCCCCCACCTGTTCCACATCCTGGAATTCCTCCAATGACT < 41bp 1 0.295223463831812 1 0.435990959405899 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692372 chr17:30692370 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_22431 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr17 30692370 30692370 1 + G A GBM 30692381 + 30692361 30692401 41 CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAG CTGTTCCACATCCTGGAATTCCTCCAATGACTCAAGCACAG < 41bp 1 0.103715312152896 1 0.235163450241089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692381 chr17:30692370 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_22432 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr11 34129864 34129864 1 + A C GBM 34129866 + 34129846 34129886 41 TCTTTGTTGTAGTTGGGGATCGAGGAAAAGATCAGGTATGG TCTTTGTTGTAGTTGGGGCTCGAGGAAAAGATCAGGTATGG < 41bp 1 0.629734334641259 1 0.860260426998138 experiment 0.740531330717481 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129866 chr11:34129864 nonsynonymous SNV 0.820 4 19 hm5C_associated_SNPs_22433 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34129801-34129889
64251 chr7 143080299 143080299 1 + T C GBM 143080316 + 143080296 143080336 41 CTTTCTGCTGGCACAGGCTCCCCTCAACCTCCCAGCTTCAC CTTCCTGCTGGCACAGGCTCCCCTCAACCTCCCAGCTTCAC < 41bp 1 0.0298875989766206 1 0.0640552341938019 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZYX ENSG00000159840 CDS Human protein_coding chr7:143080316 chr7:143080299 nonsynonymous SNV 0.021 1 4 hm5C_associated_SNPs_22434 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr7:143080291-143080321
64251 chr4 159627828 159627828 1 + G A GBM 159627823 + 159627803 159627843 41 GCCAGCCAAGGATTGCACACCTATTGAGTATCCAAAACCCG GCCAGCCAAGGATTGCACACCTATTAAGTATCCAAAACCCG < 41bp 1 0.112382038966547 1 0.0887579321861267 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ETFDH ENSG00000171503 CDS Human protein_coding chr4:159627823 chr4:159627828 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_22436 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr4:159627827-159627828
64251 chr7 104750925 104750925 1 + G A GBM 104750943 + 104750923 104750963 41 GGGGGAGAATCACCATGTGTCTCATGTTCACCGAGTCATGT GGAGGAGAATCACCATGTGTCTCATGTTCACCGAGTCATGT < 41bp 1 0.302045996375592 1 0.0169373750686646 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2E ENSG00000005483 CDS Human protein_coding chr7:104750943 chr7:104750925 synonymous SNV . 0 3 hm5C_associated_SNPs_22438 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:104750893-104750931
64251 chr18 13056646 13056646 1 + G A GBM 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTGTTAGTACAAACTGTGGAATTGAACCAT < 41bp 1 0.133516349502371 1 0.248621881008148 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056646 nonsynonymous SNV 0.001 0 17 hm5C_associated_SNPs_22439 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr18 13056646 13056646 1 + G A GBM 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTGTTAGTACAAACTGTGGAATTGAACCATGGGA < 41bp 1 0.249993342135894 1 0.12364250421524 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056646 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_22440 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr1 47838725 47838725 1 + C T GBM 47838724 + 47838704 47838744 41 CCTTCAAGGATGGAACAAGACCATGGATGGGAAGGCAGATG CCTTCAAGGATGGAACAAGACTATGGATGGGAAGGCAGATG < 41bp 1 0.670887813908961 1 0.0541785061359406 experiment 0.658224372182077 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838724 chr1:47838725 synonymous SNV . 0 22 hm5C_associated_SNPs_22441 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:47838666-47838734
64251 chr17 40651020 40651020 1 + C T GBM 40651016 + 40650996 40651036 41 ATGTCTGTTATCCTTGGTATCATCCATATGCTGTTTGGAGT ATGTCTGTTATCCTTGGTATCATCTATATGCTGTTTGGAGT < 41bp 1 0.185339091367201 1 0.130621463060379 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40651016 chr17:40651020 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_22442 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40650960-40651052
64251 chr17 40651020 40651020 1 + C T GBM 40651019 + 40650999 40651039 41 TCTGTTATCCTTGGTATCATCCATATGCTGTTTGGAGTCAG TCTGTTATCCTTGGTATCATCTATATGCTGTTTGGAGTCAG < 41bp 1 0.612503060836252 1 0.63115793466568 experiment 0.774993878327496 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40651019 chr17:40651020 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_22443 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40650960-40651052
64251 chr17 40651020 40651020 1 + C T GBM 40651026 + 40651006 40651046 41 TCCTTGGTATCATCCATATGCTGTTTGGAGTCAGCCTGAGT TCCTTGGTATCATCTATATGCTGTTTGGAGTCAGCCTGAGT < 41bp 1 0.154027012036562 1 0.0653258562088013 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40651026 chr17:40651020 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_22444 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40650960-40651052
64251 chr2 217366127 217366127 1 + G A GBM 217366129 + 217366109 217366149 41 GGAGTTGAAAGACCAGTAGACGCTCCTCTACTCTTTGAGAC GGAGTTGAAAGACCAGTAAACGCTCCTCTACTCTTTGAGAC < 41bp 1 0.520091121870764 1 0.206044852733612 experiment 0.959817756258472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217366129 chr2:217366127 synonymous SNV . 0 19 hm5C_associated_SNPs_22445 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:217365985-217366323
64251 chr3 138329863 138329863 1 + G C GBM 138329875 + 138329855 138329895 41 TATCTCCGGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA TATCTCCGCACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA < 41bp 1 0.724848708802926 1 0.848543763160706 experiment 0.550302582394147 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138329875 chr3:138329863 nonsynonymous SNV 0.006 0 9 hm5C_associated_SNPs_22446 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:138329854-138329877
64251 chr1 183495733 183495733 1 + A T GBM 183495750 + 183495730 183495770 41 GTTATTACAAGAACTGTGTACAGTATTTAATGTAGATTTAC GTTTTTACAAGAACTGTGTACAGTATTTAATGTAGATTTAC < 41bp 1 0.251470363188592 1 0.0394307076931 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183495750 chr1:183495733 nonsynonymous SNV 0.993 4 4 hm5C_associated_SNPs_22449 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183495720-183495740
64251 chr19 18966740 18966740 1 + G A GBM 18966735 + 18966715 18966755 41 TGCCCCAATGGTGTTGCAGGCCGGTGCTGGTGTGTGCTCCG TGCCCCAATGGTGTTGCAGGCCGGTACTGGTGTGTGCTCCG < 41bp 1 0.254782280204397 1 0.238762766122818 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966735 chr19:18966740 synonymous SNV . 0 26 hm5C_associated_SNPs_22450 0 0 11 BUD13 POSTAR2 ENCODE chr19:18966710-18966788
64251 chr16 22337428 22337428 1 + C T GBM 22337437 + 22337417 22337457 41 CTGAAGGCCTTCGTGGAGGCCACCTTTCAGAGACAGTTTGT CTGAAGGCCTTTGTGGAGGCCACCTTTCAGAGACAGTTTGT < 41bp 1 0.31618878212045 1 0.050140380859375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337437 chr16:22337428 synonymous SNV . 0 12 hm5C_associated_SNPs_22457 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:22337423-22337446
64251 chr17 7476181 7476181 1 + C T GBM 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA ATGTCTGCGAGCCAGGATTCCTGGTAAGAAAGGCATTTGCA < 41bp 1 0.595918914463193 1 0.118013113737106 experiment 0.808162171073613 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476181 stopgain 0.996 0 22 hm5C_associated_SNPs_22463 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr5 53815350 53815350 1 + C T GBM 53815367 + 53815347 53815387 41 TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC TAGTGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC < 41bp 1 0.37080312017677 1 0.340247392654419 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815367 chr5:53815350 nonsynonymous SNV 0.996 2 4 hm5C_associated_SNPs_22466 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:53815340-53815360
64251 chr15 89182676 89182676 1 + C T GBM 89182657 + 89182637 89182677 41 ATGGTGGGGCTGGGGCCCCACCGGGAGAGTGGCCTGGCTCG ATGGTGGGGCTGGGGCCCCACCGGGAGAGTGGCCTGGCTTG < 41bp 1 0.797677091962492 1 0.8077712059021 experiment 0.404645816075015 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ISG20 ENSG00000172183 CDS Human protein_coding chr15:89182657 chr15:89182676 nonsynonymous SNV 0.416 3 40 hm5C_associated_SNPs_22467 0 0 1 DDX3X POSTAR2 ENCODE chr15:89182633-89182683
64251 chr6 27101047 27101047 1 + T C GBM 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACCGGCGG < 41bp 1 0.65527127155817 1 0.763683080673218 experiment 0.689457456883659 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101047 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_22469 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101047 27101047 1 + T C GBM 27101050 + 27101030 27101070 41 CGCCGAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACA CGCCGAGATCCTGGAACCGGCGGGCAACGCGGCCCGCGACA < 41bp 1 0.778748125692207 1 0.939349949359894 experiment 0.442503748615586 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101050 chr6:27101047 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_22470 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101047 27101047 1 + T C GBM 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACCGGCGGGCAACGCGGCCCGCGACAACAA < 41bp 1 0.576613756629546 1 0.534961521625519 experiment 0.846772486740907 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101047 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_22471 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101047 27101047 1 + T C GBM 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACCGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC < 41bp 1 0.335294615254433 1 0.233804672956467 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101047 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_22472 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101047 27101047 1 + T C GBM 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACCGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.43370912004398 1 0.163655251264572 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101047 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_22473 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr1 26885383 26885383 1 + C T GBM 26885380 + 26885360 26885400 41 GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC GCCACCGGCCTGATGGAAGACGATGGCAAGCCTCGTGCCCC < 41bp 1 0.574701402177707 1 0.512524247169495 experiment 0.850597195644586 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885380 chr1:26885383 synonymous SNV . 0 24 hm5C_associated_SNPs_22475 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr7 129093096 129093096 1 + C T GBM 129093106 + 129093086 129093126 41 ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC ATTCAGAGGTTGATGTGCTACACTGGTCCAGGTACAACTGC < 41bp 1 0.629622326092623 1 0.115285933017731 experiment 0.740755347814753 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093106 chr7:129093096 synonymous SNV . 0 11 hm5C_associated_SNPs_22476 0 0 4 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr11 722150 722150 1 + C T GBM 722139 + 722119 722159 41 CCAGCGCCGCGGAGCTCGTGCACTTCCTCTTCGGGCCTCTG CCAGCGCCGCGGAGCTCGTGCACTTCCTCTTTGGGCCTCTG < 41bp 1 0.125525176661353 1 0.0484163761138916 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722139 chr11:722150 synonymous SNV . 0 32 hm5C_associated_SNPs_22477 0 0 3 GRWD1 POSTAR2 ENCODE chr11:722134-722154
64251 chr11 722150 722150 1 + C T GBM 722163 + 722143 722183 41 TCCTCTTCGGGCCTCTGGACCTGGTGCCTGGGGCCGGGCGG TCCTCTTTGGGCCTCTGGACCTGGTGCCTGGGGCCGGGCGG < 41bp 1 0.769393210280233 1 0.5978182554245 experiment 0.461213579439534 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722163 chr11:722150 synonymous SNV . 0 8 hm5C_associated_SNPs_22478 0 0 3 GRWD1 POSTAR2 ENCODE chr11:722134-722154
64251 chr1 151006637 151006637 1 + C A GBM 151006621 + 151006601 151006641 41 AGTGCCCTCTAGATCAGGGGCTGCCTAAACTCTCTGCTGAG AGTGCCCTCTAGATCAGGGGCTGCCTAAACTCTCTGATGAG < 41bp 1 0.29869910328791 1 0.134575694799423 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006621 chr1:151006637 nonsynonymous SNV 0.058 4 37 hm5C_associated_SNPs_22479 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006623-151006651
64251 chr8 22473344 22473344 1 + C T GBM 22473327 + 22473307 22473347 41 TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATC TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTTATC < 41bp 1 0.256285755110328 1 0.2682945728302 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22473327 chr8:22473344 synonymous SNV . 0 38 hm5C_associated_SNPs_22480 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:22473342-22473368
64251 chr20 47896896 47896896 1 + C T GBM 47896878 + 47896858 47896898 41 TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGA TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATTGA < 41bp 1 0.0557314694934637 1 0.109531372785568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896878 chr20:47896896 . . 0 39 hm5C_associated_SNPs_22481 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896896 47896896 1 + C T GBM 47896885 + 47896865 47896905 41 TATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTT TATGATGACTTAGCTTTTTTCCCCGACAGATTGACTATGTT < 41bp 1 0.178896499904066 1 0.0861063599586487 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896885 chr20:47896896 . . 0 32 hm5C_associated_SNPs_22482 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896896 47896896 1 + C T GBM 47896886 + 47896866 47896906 41 ATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG ATGATGACTTAGCTTTTTTCCCCGACAGATTGACTATGTTG < 41bp 1 0.407468638722796 1 0.209396302700043 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896886 chr20:47896896 . . 0 31 hm5C_associated_SNPs_22483 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896896 47896896 1 + C T GBM 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATGACTTAGCTTTTTTCCCCGACAGATTGACTATGTTGA < 41bp 1 0.0538824581480011 1 0.103777945041656 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896896 . . 0 30 hm5C_associated_SNPs_22484 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896896 47896896 1 + C T GBM 47896899 + 47896879 47896919 41 TTTTTTCCCCGACAGATCGACTATGTTGATCTAACTTTTCT TTTTTTCCCCGACAGATTGACTATGTTGATCTAACTTTTCT < 41bp 1 0.168118625534523 1 0.091402143239975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896899 chr20:47896896 . . 0 18 hm5C_associated_SNPs_22485 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896896 47896896 1 + C T GBM 47896909 + 47896889 47896929 41 GACAGATCGACTATGTTGATCTAACTTTTCTAAGCCAGTTT GACAGATTGACTATGTTGATCTAACTTTTCTAAGCCAGTTT < 41bp 1 0.107747448460606 1 0.0645903944969177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896909 chr20:47896896 . . 0 8 hm5C_associated_SNPs_22486 0 0 101 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chrX 73046529 73046529 1 - C T GBM 73046526 - 73046506 73046546 41 TGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTG TGGAGGCCCATGACCCAAAACCCAGGAAGGATAGAAGCTTG < 41bp 1 0.259481290770329 1 0.297316372394562 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046526 chrX:73046529 . . 0 18 hm5C_associated_SNPs_22487 0 0 69 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046529 73046529 1 - C T GBM 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA GGAATCTGGAGGCCCATGACCCAAAACCCAGGAAGGATAGA < 41bp 1 0.137364137970555 1 0.203184336423874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046529 . . 0 24 hm5C_associated_SNPs_22488 0 0 69 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046529 73046529 1 - C T GBM 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CGGAATCTGGAGGCCCATGACCCAAAACCCAGGAAGGATAG < 41bp 1 0.35908009177258 1 0.361499220132828 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046529 . . 0 25 hm5C_associated_SNPs_22489 0 0 69 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046529 73046529 1 - C T GBM 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCGGAATCTGGAGGCCCATGACCCAAAACCCAGGAA < 41bp 1 0.0834940281015657 1 0.204696625471115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046529 . . 0 31 hm5C_associated_SNPs_22490 0 0 69 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr11 2424076 2424076 1 + C T GBM 2424079 + 2424059 2424099 41 CCCTCACCCCCGTCAGGCCTCCTCCCAGCCACGGTGCAGCC CCCTCACCCCCGTCAGGTCTCCTCCCAGCCACGGTGCAGCC < 41bp 1 0.0667449141351794 1 0.0356303453445435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424079 chr11:2424076 synonymous SNV . 0 18 hm5C_associated_SNPs_22491 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:2424058-2424086
64251 chr15 93486285 93486285 1 + G A GBM 93486284 + 93486264 93486304 41 AACTTCAAGAAAAAAGAGGACGAAATCAAACAATGGTATAT AACTTCAAGAAAAAAGAGGACAAAATCAAACAATGGTATAT < 41bp 1 0.161457254264217 1 0.263472974300385 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93486284 chr15:93486285 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_22494 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:93486228-93486290
64251 chr2 39008770 39008770 1 + G T GBM 39008755 + 39008735 39008775 41 GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCT GAAACTATGAATGAAGGGGACCATAGAGTGAGGGATAAGCT < 41bp 1 0.214715289732219 1 0.061363697052002 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008755 chr2:39008770 nonsynonymous SNV 0.922 0 36 hm5C_associated_SNPs_22495 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr2:39008706-39008771
64251 chr6 30545865 30545865 1 + C T GBM 30545872 + 30545852 30545892 41 GCAAAAAAAAAAGCGAGATACCCGAAAAGGCAGGCGGAAGA GCAAAAAAAAAAGTGAGATACCCGAAAAGGCAGGCGGAAGA < 41bp 1 0.445120876828568 1 0.499826908111572 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30545872 chr6:30545865 stopgain 0.998 0 14 hm5C_associated_SNPs_22497 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:30545860-30545880
64251 chr10 60549155 60549155 1 + C T GBM 60549151 + 60549131 60549171 41 TTTCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT TTTCAGTATCATTTAAACAGCGTTTCCGAATGTATGGTGCT < 41bp 1 0.0160440925323874 1 0.0241343677043915 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549151 chr10:60549155 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_22498 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60549137-60549216
64251 chr1 192779341 192779341 1 + C A GBM 192779358 + 192779338 192779378 41 TTCCTCTACTCCTGGGAAGCCCAAAACCGGCAAAAAAAGCA TTCATCTACTCCTGGGAAGCCCAAAACCGGCAAAAAAAGCA < 41bp 1 0.276921847809396 1 0.59360259771347 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RGS2 ENSG00000116741 CDS Human protein_coding chr1:192779358 chr1:192779341 synonymous SNV . 0 4 hm5C_associated_SNPs_22499 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:192779322-192779350
64251 chr3 39104641 39104641 1 + G A GBM 39104645 + 39104625 39104665 41 CTTTTCACAGCCGGTCGAGACTCTATCATAAGAATATGGAG CTTTTCACAGCCGGTCAAGACTCTATCATAAGAATATGGAG < 41bp 1 0.613742096281343 1 0.888551235198975 experiment 0.772515807437314 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR48 ENSG00000114742 CDS Human protein_coding chr3:39104645 chr3:39104641 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_22500 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:39104611-39104666
64251 chr3 14487247 14487247 1 + T G GBM 14487265 + 14487245 14487285 41 TTTATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTT TTGATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTT < 41bp 1 0.192582280105612 1 0.382622539997101 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487265 chr3:14487247 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_22501 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:14487240-14487260
64251 chr7 40102501 40102501 1 + C G GBM 40102521 + 40102501 40102541 41 CCAGCCATTGATGTATGGAGCTGTGGGTAAGATAGCCTTAT GCAGCCATTGATGTATGGAGCTGTGGGTAAGATAGCCTTAT < 41bp 1 0.25573609675494 1 0.433857381343842 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102521 chr7:40102501 nonsynonymous SNV 0.991 3 1 hm5C_associated_SNPs_22502 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:40102446-40102506
64251 chr22 23438412 23438412 1 + G A GBM 23438428 + 23438408 23438448 41 CTGCGCTCCCGGGACATGACCACGGGCATTGTGGAGAACAA CTGCACTCCCGGGACATGACCACGGGCATTGTGGAGAACAA < 41bp 1 0.663029780951176 1 0.781645178794861 experiment 0.673940438097649 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438428 chr22:23438412 nonsynonymous SNV 0.996 1 5 hm5C_associated_SNPs_22503 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23438410-23438438
64251 chr7 135291531 135291531 1 + C T GBM 135291549 + 135291529 135291569 41 TTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT TTTGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT < 41bp 1 0.24541440151174 1 0.0614909827709198 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291549 chr7:135291531 nonsynonymous SNV 0.770 2 3 hm5C_associated_SNPs_22504 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:135291505-135291532
64251 chrX 69354394 69354394 1 + G A GBM 69354374 + 69354354 69354394 41 CTCCTTTTTGCTCTTCCAGCCGAAATGAAGATTTGGAAGAG CTCCTTTTTGCTCTTCCAGCCGAAATGAAGATTTGGAAGAA < 41bp 1 0.555544318482541 1 0.847776055335999 experiment 0.888911363034917 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69354374 chrX:69354394 synonymous SNV . 0 41 hm5C_associated_SNPs_22506 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chrX:69354394-69354395
64251 chr19 50296295 50296295 1 + G T GBM 50296286 + 50296266 50296306 41 GTCAGCCTCATCACCTGTCTCTGCAAGAAGAACCCAGATGA GTCAGCCTCATCACCTGTCTCTGCAAGAATAACCCAGATGA < 41bp 1 0.789595662561244 1 0.772589445114136 experiment 0.420808674877511 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50296286 chr19:50296295 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_22507 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50296283-50296312
64251 chr12 105538170 105538170 1 + G T GBM 105538150 + 105538130 105538170 41 AAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAAG AAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAAT < 41bp 1 0.0428636073693348 1 0.121939361095428 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105538150 chr12:105538170 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_22508 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:105538125-105538196
64251 chr10 1118122 1118122 1 + G A GBM 1118127 + 1118107 1118147 41 AAGCGCAAGTTGTTCGACTGCTCGCCAAACAAAACAGAAGC AAGCGCAAGTTGTTCAACTGCTCGCCAAACAAAACAGAAGC < 41bp 1 0.276636268710254 1 0.531671583652496 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR37 ENSG00000047056 CDS Human protein_coding chr10:1118127 chr10:1118122 synonymous SNV . 0 16 hm5C_associated_SNPs_22509 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:1118112-1118128
64251 chr7 4794998 4794998 1 + C T GBM 4795002 + 4794982 4795022 41 CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC CCCTACTACCGGACGGTCGACAAAGGCTGGCAGGTGAAGCC < 41bp 1 0.27101617962125 1 0.816519260406494 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4795002 chr7:4794998 nonsynonymous SNV 0.276 5 17 hm5C_associated_SNPs_22510 0 0 15 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:4794961-4795007
64251 chr22 30074260 30074260 1 + G A GBM 30074250 + 30074230 30074270 41 TTCAACCTCATTGGTGACAGCCTGTCTTTCGACTTCAAAGA TTCAACCTCATTGGTGACAGCCTGTCTTTCAACTTCAAAGA < 41bp 1 0.102754546692602 1 0.0788628756999969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30074250 chr22:30074260 nonsynonymous SNV 0.996 4 31 hm5C_associated_SNPs_22512 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:30074240-30074260
64251 chr4 119631200 119631200 1 + G T GBM 119631220 + 119631200 119631240 41 GAAACATATGCATCCTATTTCAGTGCTCCTAATTCCTACTT TAAACATATGCATCCTATTTCAGTGCTCCTAATTCCTACTT < 41bp 1 0.500189092380504 1 0.233778387308121 experiment 0.999621815238993 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control METTL14 ENSG00000145388 CDS Human protein_coding chr4:119631220 chr4:119631200 stopgain 0.999 1 1 hm5C_associated_SNPs_22513 0 0 2 METTL14 POSTAR2 GSE46705,GSM1135014 chr4:119631200-119631220
64251 chr19 45493732 45493732 1 + C T GBM 45493744 + 45493724 45493764 41 CAGTCATTCGTGGTCCTCCTCTACATCCTGGACAACGAGAC CAGTCATTTGTGGTCCTCCTCTACATCCTGGACAACGAGAC < 41bp 1 0.70608032167563 1 0.631477653980255 experiment 0.58783935664874 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493744 chr19:45493732 synonymous SNV . 0 9 hm5C_associated_SNPs_22517 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr19 38573338 38573338 1 + C T GBM 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC CGCCGTCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC < 41bp 1 0.084665802723751 1 0.0563046634197235 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573338 nonsynonymous SNV 0.160 0 6 hm5C_associated_SNPs_22518 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr1 147095987 147095987 1 + G A GBM 147095968 + 147095948 147095988 41 GGCCCCAGTGGGGGGCAGGGCAGCTTCCCAGGAGGGATGGG GGCCCCAGTGGGGGGCAGGGCAGCTTCCCAGGAGGGATGAG < 41bp 1 0.535657857293648 1 0.387190580368042 experiment 0.928684285412704 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCL9 ENSG00000116128 CDS Human protein_coding chr1:147095968 chr1:147095987 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_22519 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:147095945-147095987
64251 chr12 56361680 56361680 1 + C A GBM 56361667 + 56361647 56361687 41 TGAGGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGC TGAGGGTGTGCCCAGTACTGCCATCCGAGAGATATCTCTGC < 41bp 1 0.0358608166897677 1 0.257896095514297 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK2 ENSG00000123374 CDS Human protein_coding chr12:56361667 chr12:56361680 synonymous SNV . 0 34 hm5C_associated_SNPs_22520 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:56361660-56361680
64251 chr12 56361680 56361680 1 + C A GBM 56361668 + 56361648 56361688 41 GAGGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGCT GAGGGTGTGCCCAGTACTGCCATCCGAGAGATATCTCTGCT < 41bp 1 0.213744329897664 1 0.065961629152298 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK2 ENSG00000123374 CDS Human protein_coding chr12:56361668 chr12:56361680 synonymous SNV . 0 33 hm5C_associated_SNPs_22521 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:56361660-56361680
64251 chr2 29344297 29344297 1 + C T GBM 29344282 + 29344262 29344302 41 TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTG TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATTCTTTG < 41bp 1 0.0576261387234818 1 0.0858077108860016 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29344282 chr2:29344297 nonsynonymous SNV 0.593 0 36 hm5C_associated_SNPs_22522 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr2:29344280-29344300
64251 chr6 33169562 33169562 1 + T G GBM 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTGTGTCCTCTTCCTTATCCCCGTGGA < 41bp 1 0.107717919118908 1 0.0401052236557007 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169562 nonsynonymous SNV 0.997 3 17 hm5C_associated_SNPs_22523 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr1 38171190 38171190 1 + T G GBM 38171209 + 38171189 38171229 41 CTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGG CGTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGG < 41bp 1 0.119539328712664 1 0.0556178390979767 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38171209 chr1:38171190 nonsynonymous SNV 0.990 4 2 hm5C_associated_SNPs_22530 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:38171174-38171195
64251 chr16 57486775 57486775 1 + G A GBM 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAGCAGTTGCAGCACCACATCCTGACGGCAGCCCTT < 41bp 1 0.555883455599327 1 0.815593719482422 experiment 0.888233088801346 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486775 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_22531 1 0 4 BUD13 POSTAR2 ENCODE chr16:57486763-57486834
64251 chr14 39649961 39649961 1 + G T GBM 39649941 + 39649921 39649961 41 GGAAGAGGAAAAGGAAATAGCGATTGTTCATAGTGATGCAG GGAAGAGGAAAAGGAAATAGCGATTGTTCATAGTGATGCAT < 41bp 1 0.407361701822448 1 0.207034587860107 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649941 chr14:39649961 stopgain 1.000 1 41 hm5C_associated_SNPs_22532 0 0 32 TARDBP POSTAR2 DRA001158,DRS012387 chr14:39649876-39649980
64251 chr5 134154667 134154667 1 + G A GBM 134154670 + 134154650 134154690 41 AAGAACCCAAGGAAGGCGAGCGGAAGATTTACTTGGCAATT AAGAACCCAAGGAAGGCAAGCGGAAGATTTACTTGGCAATT < 41bp 1 0.714160288913061 1 0.775851845741272 experiment 0.571679422173878 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134154670 chr5:134154667 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_22533 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:134154623-134154669
64251 chr17 4859425 4859425 1 + G A GBM 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCGGTGACCAAATCGATCCAGGCGTGAG < 41bp 1 0.389630915145416 1 0.119606345891953 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859425 nonsynonymous SNV 0.641 2 23 hm5C_associated_SNPs_22534 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859425 4859425 1 + G A GBM 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCGGTGACCAAATCGATCCAGGCGTGAGT < 41bp 1 0.341219010061976 1 0.663475573062897 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859425 nonsynonymous SNV 0.641 2 22 hm5C_associated_SNPs_22535 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chrX 151869818 151869818 1 + G T GBM 151869802 + 151869782 151869822 41 TTGCAGCTGGTCTTTGGCATCGAGCTGATGGAAGTGGACCC TTGCAGCTGGTCTTTGGCATCGAGCTGATGGAAGTGTACCC < 41bp 1 0.605626438036354 1 0.747515797615051 experiment 0.788747123927292 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869802 chrX:151869818 nonsynonymous SNV 0.030 1 37 hm5C_associated_SNPs_22537 0 0 2 LIN28B POSTAR2 ENCODE chrX:151869778-151869824
64251 chr19 35501038 35501038 1 + G A GBM 35501031 + 35501011 35501051 41 TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT TGCAGCGTGAGATCCTGCTCCAGGGCCACCTCTACCTCTCT < 41bp 1 0.663024500111681 1 0.898587942123413 experiment 0.673950999776638 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501031 chr19:35501038 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_22538 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:35501000-35501038
64251 chrX 73044958 73044958 1 - T C GBM 73044939 - 73044919 73044959 41 TACCATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTAT TGCCATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTAT < 41bp 1 0.0933831799302323 1 0.197257876396179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044939 chrX:73044958 . . 0 2 hm5C_associated_SNPs_22539 0 0 48 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044958 73044958 1 - T C GBM 73044945 - 73044925 73044965 41 GCCAGATACCATGCTGGGTGCTAGAGCTACCAAAGGGGGAA GCCAGATGCCATGCTGGGTGCTAGAGCTACCAAAGGGGGAA < 41bp 1 0.498987958036709 1 0.295429050922394 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044945 chrX:73044958 . . 0 8 hm5C_associated_SNPs_22540 0 0 48 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 128486389 128486389 1 + C T GBM 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTTGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC < 41bp 1 0.0225025286035274 1 0.0272628962993622 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486389 synonymous SNV . 0 5 hm5C_associated_SNPs_22542 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:128486369-128486399
64251 chr5 82834314 82834314 1 + T C GBM 82834308 + 82834288 82834328 41 CACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG CACTCTCCCACGTAGTCCTGCCTCTGCCTTTATGGAGCAGG < 41bp 1 0.0149046312441822 1 0.0475550591945648 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834308 chr5:82834314 nonsynonymous SNV 0.005 1 27 hm5C_associated_SNPs_22543 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr5:82834300-82834320
64251 chr4 8608470 8608470 1 + G A GBM 8608478 + 8608458 8608498 41 TTTCAGGGTGCCGGCTACAACGGGTGGACGAGCGGGAGGCA TTTCAGGGTGCCAGCTACAACGGGTGGACGAGCGGGAGGCA < 41bp 1 0.750873899405004 1 0.899812936782837 experiment 0.498252201189991 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control CPZ ENSG00000109625 CDS Human protein_coding chr4:8608478 chr4:8608470 nonsynonymous SNV 0.217 0 13 hm5C_associated_SNPs_22544 0 0 2 AGGF1 POSTAR2 ENCODE chr4:8608420-8608471
64251 chr8 98657012 98657012 1 + C T GBM 98657015 + 98656995 98657035 41 CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCG CAAGCGGGAGGAGGCGGTGGCCGTGCCGGCCGCGGCCCCCG < 41bp 1 0.665088061607603 1 0.484542727470398 experiment 0.669823876784795 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657015 chr8:98657012 nonsynonymous SNV 0.223 0 18 hm5C_associated_SNPs_22545 0 0 6 BUD13 POSTAR2 ENCODE chr8:98656908-98657016
64251 chr8 98657012 98657012 1 + C T GBM 98657024 + 98657004 98657044 41 GGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGG GGAGGCGGTGGCCGTGCCGGCCGCGGCCCCCGACGACCTGG < 41bp 1 0.788645787680786 1 0.47883415222168 experiment 0.422708424638428 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657024 chr8:98657012 nonsynonymous SNV 0.223 0 9 hm5C_associated_SNPs_22546 0 0 6 BUD13 POSTAR2 ENCODE chr8:98656908-98657016
64251 chr8 98657012 98657012 1 + C T GBM 98657027 + 98657007 98657047 41 GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT GGCGGTGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT < 41bp 1 0.782438845641689 1 0.733436286449432 experiment 0.435122308716622 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657027 chr8:98657012 nonsynonymous SNV 0.223 0 6 hm5C_associated_SNPs_22547 0 0 6 BUD13 POSTAR2 ENCODE chr8:98656908-98657016
64251 chr3 30713561 30713561 1 + G T GBM 30713566 + 30713546 30713586 41 AAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACAT AAGGACATCTTCTCATACATCAATCTGAAGCATGAGAACAT < 41bp 1 0.114722607963631 1 0.0592858791351318 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713566 chr3:30713561 nonsynonymous SNV 0.992 3 16 hm5C_associated_SNPs_22548 0 0 1 RBM15 POSTAR2 ENCODE chr3:30713494-30713564
64251 chr5 139917073 139917073 1 + T A GBM 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAAATC < 41bp 1 0.26851109633959 1 0.486939817667007 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917073 nonsynonymous SNV 0.998 4 39 hm5C_associated_SNPs_22549 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139917069-139917094
64251 chr22 30038260 30038260 1 + G A GBM 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACACCGTCCAG < 41bp 1 0.658857409242081 1 0.581557035446167 experiment 0.682285181515839 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038260 nonsynonymous SNV 0.457 4 33 hm5C_associated_SNPs_22550 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr22:30038240-30038260
64251 chr15 64418385 64418385 1 + C T GBM 64418395 + 64418375 64418415 41 AGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTC AGAATGGCTTTATTGTCCCTCCGCCCCCGGAGAAGAGCCTC < 41bp 1 0.106631930116983 1 0.262977004051208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418395 chr15:64418385 synonymous SNV . 0 11 hm5C_associated_SNPs_22551 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418385 64418385 1 + C T GBM 64418396 + 64418376 64418416 41 GAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCA GAATGGCTTTATTGTCCCTCCGCCCCCGGAGAAGAGCCTCA < 41bp 1 0.191078818755604 1 0.548911869525909 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418396 chr15:64418385 synonymous SNV . 0 10 hm5C_associated_SNPs_22552 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418385 64418385 1 + C T GBM 64418398 + 64418378 64418418 41 ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA ATGGCTTTATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA < 41bp 1 0.142852229694944 1 0.108212649822235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418398 chr15:64418385 synonymous SNV . 0 8 hm5C_associated_SNPs_22553 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr19 45797651 45797651 1 + T G GBM 45797648 + 45797628 45797668 41 ATGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG ATGACCCGCAGAAACACCTACGTGTGCACAGAACGCCCGGG < 41bp 1 0.202453101689119 1 0.268726408481598 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797648 chr19:45797651 synonymous SNV . 0 24 hm5C_associated_SNPs_22556 0 0 1 PPIG POSTAR2 ENCODE chr19:45797645-45797700
64251 chrX 73044561 73044561 1 - C T GBM 73044553 - 73044533 73044573 41 GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAATGT GAGATCCAGACCAAAAGTCACTTAATTCAGCTTGCGAATGT < 41bp 1 0.118190403940199 1 0.0389741361141205 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044553 chrX:73044561 . . 0 13 hm5C_associated_SNPs_22557 0 0 68 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044561 73044561 1 - C T GBM 73044555 - 73044535 73044575 41 GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAAT GTGAGATCCAGACCAAAAGTCACTTAATTCAGCTTGCGAAT < 41bp 1 0.0785083382263474 1 0.049656093120575 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044555 chrX:73044561 . . 0 15 hm5C_associated_SNPs_22558 0 0 68 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044561 73044561 1 - C T GBM 73044568 - 73044548 73044588 41 TGAAGTAATAGATGTGAGATCCAGACCGAAAGTCACTTAAT TGAAGTAATAGATGTGAGATCCAGACCAAAAGTCACTTAAT < 41bp 1 0.267520391489238 1 0.768760442733765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044568 chrX:73044561 . . 0 28 hm5C_associated_SNPs_22559 0 0 68 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr20 5154267 5154267 1 + G A GBM 5154273 + 5154253 5154293 41 GCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAA GCAGATGATACCCCAGAGGTCCTCAATAGGGCCCTTTCCAA < 41bp 1 0.187018042825879 1 0.0531316697597504 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDS2 ENSG00000101290 CDS Human protein_coding chr20:5154273 chr20:5154267 synonymous SNV . 0 15 hm5C_associated_SNPs_22560 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr20:5154217-5154273
64251 chr17 73780945 73780945 1 + G T GBM 73780936 + 73780916 73780956 41 ACTGAATAATAAAAGGGGAGCGGCGAAGAGGCAGGAAGACA ACTGAATAATAAAAGGGGAGCGGCGAAGATGCAGGAAGACA < 41bp 1 0.520829553719639 1 0.417326390743256 experiment 0.958340892560722 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73780936 chr17:73780945 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_22561 0 0 3 NCBP2 POSTAR2 ENCODE chr17:73780924-73781060
64251 chrX 129159308 129159308 1 + G A GBM 129159311 + 129159291 129159331 41 AAATATCAGACTGGGGAGTACCTGACAGAGCAAGAAGACGA AAATATCAGACTGGGGAATACCTGACAGAGCAAGAAGACGA < 41bp 1 0.181098196087018 1 0.115467399358749 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129159311 chrX:129159308 synonymous SNV . 0 18 hm5C_associated_SNPs_22562 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chrX:129159295-129159314
64251 chr1 214819447 214819447 1 + G T GBM 214819453 + 214819433 214819473 41 ATTCTTGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT ATTCTTGATGCCGATAATTCCAAAGCAGAAGTAGAGACTCT < 41bp 1 0.269177733319502 1 0.780218601226807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819453 chr1:214819447 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_22563 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819343-214819493
64251 chr4 88036073 88036073 1 + G A GBM 88036091 + 88036071 88036111 41 GCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC GCAAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC < 41bp 1 0.701149744529259 1 0.451630562543869 experiment 0.597700510941483 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036091 chr4:88036073 synonymous SNV . 0 3 hm5C_associated_SNPs_22564 0 0 4 EIF3H POSTAR2 ENCODE chr4:88036049-88036083
64251 chr2 54872404 54872404 1 + C T GBM 54872413 + 54872393 54872433 41 AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCT AAGAAGGAGATTGAAGAGCTCCAAAGCCAAGCCCAGGCCCT < 41bp 1 0.254107655765503 1 0.102052271366119 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872413 chr2:54872404 synonymous SNV . 0 12 hm5C_associated_SNPs_22565 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr2 54872404 54872404 1 + C T GBM 54872420 + 54872400 54872440 41 AGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAG AGATTGAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAG < 41bp 1 0.300633400706417 1 0.53986257314682 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872420 chr2:54872404 synonymous SNV . 0 5 hm5C_associated_SNPs_22566 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr3 57294017 57294017 1 + C T GBM 57294032 + 57294012 57294052 41 AGAATCGCATTTATTAGTCACTTGTGACTGTTTAAAGTAAG AGAATTGCATTTATTAGTCACTTGTGACTGTTTAAAGTAAG < 41bp 1 0.125160025863239 1 0.0864229500293732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57294032 chr3:57294017 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_22567 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:57294015-57294048
64251 chr17 20135090 20135090 1 + G A GBM 20135081 + 20135061 20135101 41 TTATTTCTAGGTAGTGTGATCAAGCTGGAGGAACAGAAGTC TTATTTCTAGGTAGTGTGATCAAGCTGGAAGAACAGAAGTC < 41bp 1 0.287031181250522 1 0.495704114437103 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135081 chr17:20135090 synonymous SNV . 0 30 hm5C_associated_SNPs_22568 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr17 20135090 20135090 1 + G A GBM 20135094 + 20135074 20135114 41 GTGTGATCAAGCTGGAGGAACAGAAGTCAGACCTGGAGAGG GTGTGATCAAGCTGGAAGAACAGAAGTCAGACCTGGAGAGG < 41bp 1 0.676896443918359 1 0.262619107961655 experiment 0.646207112163283 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135094 chr17:20135090 synonymous SNV . 0 17 hm5C_associated_SNPs_22569 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr17 20135090 20135090 1 + G A GBM 20135101 + 20135081 20135121 41 CAAGCTGGAGGAACAGAAGTCAGACCTGGAGAGGCAGCTGA CAAGCTGGAAGAACAGAAGTCAGACCTGGAGAGGCAGCTGA < 41bp 1 0.188952194966483 1 0.151825547218323 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135101 chr17:20135090 synonymous SNV . 0 10 hm5C_associated_SNPs_22570 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr16 57243040 57243040 1 + G T GBM 57243043 + 57243023 57243063 41 GAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATA GAGTTATTCCACTGGAATATCCACTGGGACCAGCTGTTATA < 41bp 1 0.213680489603058 1 0.0871851742267609 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57243043 chr16:57243040 nonsynonymous SNV 0.997 5 18 hm5C_associated_SNPs_22572 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:57243040-57243058
64251 chr1 145518146 145518146 1 + G T GBM 145518156 + 145518136 145518176 41 GTTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAATCG GTTGTCCTGATATTCTGCATCACTGTTAGTCACCTCAATCG < 41bp 1 0.225964053953401 1 0.0460611879825592 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145518156 chr1:145518146 nonsynonymous SNV . 0 11 hm5C_associated_SNPs_22573 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:145518113-145518147
64251 chr11 67160985 67160985 1 + C T GBM 67160984 + 67160964 67161004 41 CAGTCTTTCCTGTCTGTCTTCCGCTCACTGGCGATGCTGGA CAGTCTTTCCTGTCTGTCTTCTGCTCACTGGCGATGCTGGA < 41bp 1 0.261559936730888 1 0.455168038606644 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160984 chr11:67160985 nonsynonymous SNV 0.945 4 22 hm5C_associated_SNPs_22574 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221665 chr11:67160980-67161000
64251 chr1 162040020 162040020 1 + T C GBM 162040009 + 162039989 162040029 41 AACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA AACCTTGTGGACGATGGGCACGACCTGCGGACCCCCTTGCA < 41bp 1 0.299251522278906 1 0.363204479217529 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162040009 chr1:162040020 nonsynonymous SNV 0.999 3 32 hm5C_associated_SNPs_22575 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162039974-162040029
64251 chr5 176520478 176520478 1 + C T GBM 176520483 + 176520463 176520503 41 GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCG GCGTCTCTCCTCCAGTGGCCCCGCCTTGCTCGCCGGCCTCG < 41bp 1 0.147655102968534 1 0.0563865005970001 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176520483 chr5:176520478 nonsynonymous SNV 0.283 0 16 hm5C_associated_SNPs_22576 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176520475-176520508
64251 chr11 47289884 47289884 1 + A G GBM 47289881 + 47289861 47289901 41 ATATGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATC ATATGTGGAAGCCCTGCATGCCTGCGTCTCCATCCACCATC < 41bp 1 0.189272397685277 1 0.0236691832542419 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289881 chr11:47289884 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_22577 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:47289880-47289907
64251 chr11 47289884 47289884 1 + A G GBM 47289902 + 47289882 47289922 41 CTACGTCTCCATCCACCATCCCCATGTGAGTCTCCCCATGG CTGCGTCTCCATCCACCATCCCCATGTGAGTCTCCCCATGG < 41bp 1 0.186327347332967 1 0.408744156360626 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289902 chr11:47289884 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_22578 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:47289880-47289907
64251 chr1 151374077 151374077 1 + G T GBM 151374064 + 151374044 151374084 41 AGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACT AGGTGTTGAAATAGAGGGACCATTGTCTACAGATACCAACT < 41bp 1 0.111090706792158 1 0.11722406744957 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151374064 chr1:151374077 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_22580 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151374016-151374077
64251 chr17 37872568 37872568 1 + G A GBM 37872587 + 37872567 37872607 41 GGCCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTGGGGTC GACCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTGGGGTC < 41bp 1 0.799079439451448 1 0.598849475383759 experiment 0.401841121097104 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872587 chr17:37872568 nonsynonymous SNV 0.059 0 2 hm5C_associated_SNPs_22581 0 0 4 EFTUD2 POSTAR2 ENCODE chr17:37872521-37872584
64251 chr13 53039487 53039487 1 + G T GBM 53039491 + 53039471 53039511 41 GATTAAAAATATTCCAGATGCCAAAAAGCTTGTTAAGTATT GATTAAAAATATTCCATATGCCAAAAAGCTTGTTAAGTATT < 41bp 1 0.266928341262036 1 0.149742096662521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53039491 chr13:53039487 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_22582 0 0 13 ZC3H7B POSTAR2 GSE38201,GSM936510 chr13:53039420-53039498
64251 chr19 3119218 3119218 1 + G T GBM 3119221 + 3119201 3119241 41 CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCAT CAGAACCGGATGGAGGATAGCAAAGCCCTGTTCCGGACCAT < 41bp 1 0.393011177321995 1 0.466029137372971 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119221 chr19:3119218 nonsynonymous SNV 0.993 5 18 hm5C_associated_SNPs_22583 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:3119208-3119246
64251 chr19 39398202 39398202 1 + G A GBM 39398207 + 39398187 39398227 41 ACCCCATCCTCGCCCGCCTCCTCCGTGCACACGGAGCCCCT ACCCCATCCTCGCCCACCTCCTCCGTGCACACGGAGCCCCT < 41bp 1 0.788744653822174 1 0.816341757774353 experiment 0.422510692355651 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398207 chr19:39398202 nonsynonymous SNV 0.979 0 16 hm5C_associated_SNPs_22585 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39398171-39398202
64251 chr1 201966553 201966553 1 + G T GBM 201966541 + 201966521 201966561 41 CCTGCCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATC CCTGCCTGCTAGCTGGGGACCGCTCCTTGGCATATGTCATC < 41bp 1 0.222552597916595 1 0.0673868060112 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966541 chr1:201966553 nonsynonymous SNV 0.942 3 33 hm5C_associated_SNPs_22586 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201966505-201966553
64251 chr1 201966553 201966553 1 + G T GBM 201966545 + 201966525 201966565 41 CCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATCATCC CCTGCTAGCTGGGGACCGCTCCTTGGCATATGTCATCATCC < 41bp 1 0.157730985166847 1 0.148485332727432 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966545 chr1:201966553 nonsynonymous SNV 0.942 3 29 hm5C_associated_SNPs_22587 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201966505-201966553
64251 chr7 4794990 4794990 1 + C T GBM 4795002 + 4794982 4795022 41 CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC CCCTACTATCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC < 41bp 1 0.237929626572687 1 0.54475325345993 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4795002 chr7:4794990 synonymous SNV . 0 9 hm5C_associated_SNPs_22588 0 0 19 NOP58 POSTAR2 GSE43666,GSM1067862 chr7:4794961-4794992
64251 chr11 126279186 126279186 1 + G A GBM 126279193 + 126279173 126279213 41 GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCAATCCT GTTTCTGGAAACAACCTCCCCTCATCTGGGATGTCAATCCT < 41bp 1 0.313972542105821 1 0.116438269615173 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126279193 chr11:126279186 synonymous SNV . 0 14 hm5C_associated_SNPs_22589 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:126279177-126279213
64251 chr15 22955251 22955251 1 + C T GBM 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCATGCCG < 41bp 1 0.744954659169034 1 0.510834574699402 experiment 0.510090681661932 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955251 nonsynonymous SNV . 0 37 hm5C_associated_SNPs_22590 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr15:22955250-22955275
64251 chr4 52740458 52740458 1 + C A GBM 52740449 + 52740429 52740469 41 TTTTGTAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT TTTTGTAGGAAGTCTGCGGTCTTGCAGTTATTCAGACTGCT < 41bp 1 0.223902196340122 1 0.0580459535121918 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52740449 chr4:52740458 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_22591 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:52740434-52740474
64251 chrX 73046735 73046735 1 - C T GBM 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAAACCTGGGACAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.241514087210145 1 0.11356645822525 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046735 . . 0 7 hm5C_associated_SNPs_22592 0 0 76 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046735 73046735 1 - C T GBM 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAAACCTGGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.53041130174944 1 0.745455384254456 experiment 0.939177396501119 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046735 . . 0 12 hm5C_associated_SNPs_22593 0 0 76 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046735 73046735 1 - C T GBM 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAAA < 41bp 1 0.57923752999461 1 0.229105174541473 experiment 0.841524940010779 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046735 . . 0 40 hm5C_associated_SNPs_22594 0 0 76 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr1 94964161 94964161 1 + C T GBM 94964179 + 94964159 94964199 41 TTCGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC TTTGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC < 41bp 1 0.563048393432145 1 0.209808140993118 experiment 0.87390321313571 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94964179 chr1:94964161 stopgain 0.999 0 3 hm5C_associated_SNPs_22595 0 0 2 PRPF8 POSTAR2 ENCODE chr1:94964157-94964183
64251 chr2 64112910 64112910 1 + C A GBM 64112920 + 64112900 64112940 41 CATAGATAATCTGGGTGCCACAGTGGATCTGTATATTCTTA CATAGATAATATGGGTGCCACAGTGGATCTGTATATTCTTA < 41bp 1 0.39177634354394 1 0.484553009271622 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UGP2 ENSG00000169764 CDS Human protein_coding chr2:64112920 chr2:64112910 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_22596 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:64112886-64112926
64251 chr7 128445491 128445491 1 + G T GBM 128445505 + 128445485 128445525 41 AGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT AGAAATTGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT < 41bp 1 0.165889388361434 1 0.292534410953522 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445505 chr7:128445491 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_22597 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr7 128445491 128445491 1 + G T GBM 128445510 + 128445490 128445530 41 TGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG TTGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG < 41bp 1 0.337702138090947 1 0.374267727136612 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445510 chr7:128445491 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_22598 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr15 22862986 22862986 1 + A G GBM 22863000 + 22862980 22863020 41 TGATGTATGTGTGGATAGATCATCGGAATCTGTGACATGCC TGATGTGTGTGTGGATAGATCATCGGAATCTGTGACATGCC < 41bp 1 0.443433657872303 1 0.0760754346847534 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBGCP5 ENSG00000153575 CDS Human other chr15:22863000 chr15:22862986 synonymous SNV . 0 7 hm5C_associated_SNPs_22599 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr15:22862977-22863002
64251 chr17 30692352 30692352 1 + T G GBM 30692372 + 30692352 30692392 41 TGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT GGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT < 41bp 1 0.261336504202298 1 0.267658710479736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692372 chr17:30692352 nonsynonymous SNV 0.976 2 1 hm5C_associated_SNPs_22600 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr11 65268899 65268899 1 + G T GBM 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA GAGGTCTGTGGAAGAGATGTCCATTGGATAAATGGCTGGTA < 41bp 1 0.156230296322389 1 0.395190715789795 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268899 . . 0 29 hm5C_associated_SNPs_22601 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65268874-65268902
64251 chr12 53342931 53342931 1 + C A GBM 53342950 + 53342930 53342970 41 TCCTGTCCTTTCTCTCTCCCCGGACAGCATGAGCTTCACCA TACTGTCCTTTCTCTCTCCCCGGACAGCATGAGCTTCACCA < 41bp 1 0.148262178196808 1 0.326000034809113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KRT18 ENSG00000111057 UTR5 Human protein_coding chr12:53342950 chr12:53342931 . . 0 2 hm5C_associated_SNPs_22602 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53342920-53342940
64251 chr12 48528823 48528823 1 + T G GBM 48528825 + 48528805 48528845 41 CAGAAGACATCAAGAATGTTCGTATGAATGAAGCCAGAGAG CAGAAGACATCAAGAATGGTCGTATGAATGAAGCCAGAGAG < 41bp 1 0.22890894249323 1 0.195775479078293 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PFKM ENSG00000152556 splicing Human protein_coding chr12:48528825 chr12:48528823 . 0.195 0 19 hm5C_associated_SNPs_22603 0 0 1 BUD13 POSTAR2 ENCODE chr12:48528731-48528914
64251 chr1 161179354 161179354 1 + C A GBM 161179358 + 161179338 161179378 41 CTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAG CTTGGGGCCATGACCCATTTCTTCTGGCTGTTTGAAGAAAG < 41bp 1 0.295782480171854 1 0.13319993019104 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179358 chr1:161179354 nonsynonymous SNV 0.998 5 17 hm5C_associated_SNPs_22604 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161179326-161179363
64251 chr19 13063818 13063818 1 + C A GBM 13063834 + 13063814 13063854 41 AGAACTTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGAT AGAAATTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGAT < 41bp 1 0.510760307593144 1 0.837677419185638 experiment 0.978479384813712 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23A ENSG00000179262 CDS Human protein_coding chr19:13063834 chr19:13063818 nonsynonymous SNV 0.999 3 5 hm5C_associated_SNPs_22605 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr19:13063782-13063926
64251 chr3 10123036 10123036 1 + G A GBM 10123048 + 10123028 10123068 41 AGTGTTTAGCTGCTGAGAATCACGGTGTAGTTGATGGACCA AGTGTTTAACTGCTGAGAATCACGGTGTAGTTGATGGACCA < 41bp 1 0.615946405168505 1 0.809367179870605 experiment 0.768107189662991 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10123048 chr3:10123036 nonsynonymous SNV 0.458 0 9 hm5C_associated_SNPs_22607 0 0 13 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:10123020-10123040
64251 chr19 38780793 38780793 1 + C A GBM 38780801 + 38780781 38780821 41 CACTGGGCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTG CACTGGGCCTTGACGTGCATCCTTCCCACGCTGGTACTTTG < 41bp 1 0.0126129282788349 1 0.0807620286941528 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780801 chr19:38780793 stopgain 0.780 1 13 hm5C_associated_SNPs_22608 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chr2 10022847 10022847 1 + G A GBM 10022851 + 10022831 10022871 41 ACAGGTTTGTTGAAGAGGACCATATTCCTTACATAAATGCT ACAGGTTTGTTGAAGAAGACCATATTCCTTACATAAATGCT < 41bp 1 0.0541752487490136 1 0.126997977495193 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAF1B ENSG00000115750 CDS Human protein_coding chr2:10022851 chr2:10022847 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_22609 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:10022843-10022864
64251 chr1 87208010 87208010 1 + C A GBM 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTATCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG < 41bp 1 0.344827434122448 1 0.217526972293854 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208010 nonsynonymous SNV 0.995 1 8 hm5C_associated_SNPs_22610 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:87207995-87208025
64251 chr11 210615 210615 1 + C A GBM 210603 + 210583 210623 41 CTTTACCGACACCTGGGGACCCTTCTCCGGCACTGTGTGAT CTTTACCGACACCTGGGGACCCTTCTCCGGCAATGTGTGAT < 41bp 1 0.0120282185506887 1 0.0652305781841278 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:210603 chr11:210615 nonsynonymous SNV 0.907 1 33 hm5C_associated_SNPs_22611 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:210577-210617
64251 chr1 161199503 161199503 1 + G A GBM 161199507 + 161199487 161199527 41 GGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTT GGCTCCCTTTGAACCCAGCCCAATCTTTGGTCCCAGCATTT < 41bp 1 0.0542982781909407 1 0.063602477312088 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199507 chr1:161199503 nonsynonymous SNV 0.000 2 17 hm5C_associated_SNPs_22612 0 0 1 UPF1 POSTAR2 ENCODE chr1:161199483-161199575
64251 chr11 121495965 121495965 1 + C T GBM 121495977 + 121495957 121495997 41 CCATCCTGCTGTACGATGAGCTGGGGTCTGGTGAGTTGCGA CCATCCTGTTGTACGATGAGCTGGGGTCTGGTGAGTTGCGA < 41bp 1 0.483715412867975 1 0.420775443315506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SORL1 ENSG00000137642 CDS Human protein_coding chr11:121495977 chr11:121495965 synonymous SNV . 0 9 hm5C_associated_SNPs_22613 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:121495887-121495993
64251 chr16 3712025 3712025 1 - C T GBM 3712045 - 3712025 3712065 41 CCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCG CCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCA < 41bp 1 0.272973938436825 1 0.173111766576767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712045 chr16:3712025 nonsynonymous SNV 0.755 1 41 hm5C_associated_SNPs_22614 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:3712024-3712025
64251 chr4 53579475 53579475 1 + C A GBM 53579455 + 53579435 53579475 41 CCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTC CCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTA < 41bp 1 0.336365986856547 1 0.228628814220428 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579455 chr4:53579475 . . 0 41 hm5C_associated_SNPs_22615 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579457 + 53579437 53579477 41 AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTCTC AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTATC < 41bp 1 0.666717896666938 1 0.571459293365479 experiment 0.666564206666125 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579457 chr4:53579475 . . 0 39 hm5C_associated_SNPs_22616 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579477 + 53579457 53579497 41 CAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGA CAGAAGGGTAAAGTAAGTATCCATAAAACCCAGAGAAGAGA < 41bp 1 0.155381207631512 1 0.0879610776901245 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579477 chr4:53579475 . . 0 19 hm5C_associated_SNPs_22617 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579478 + 53579458 53579498 41 AGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGAC AGAAGGGTAAAGTAAGTATCCATAAAACCCAGAGAAGAGAC < 41bp 1 0.392518314128283 1 0.269105076789856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579478 chr4:53579475 . . 0 18 hm5C_associated_SNPs_22618 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579485 + 53579465 53579505 41 TAAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAG TAAAGTAAGTATCCATAAAACCCAGAGAAGAGACTGGAAAG < 41bp 1 0.334111618491323 1 0.208082050085068 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579485 chr4:53579475 . . 0 11 hm5C_associated_SNPs_22619 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579486 + 53579466 53579506 41 AAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGC AAAGTAAGTATCCATAAAACCCAGAGAAGAGACTGGAAAGC < 41bp 1 0.522102201151858 1 0.153190612792969 experiment 0.955795597696285 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579486 chr4:53579475 . . 0 10 hm5C_associated_SNPs_22620 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579475 53579475 1 + C A GBM 53579487 + 53579467 53579507 41 AAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGCT AAGTAAGTATCCATAAAACCCAGAGAAGAGACTGGAAAGCT < 41bp 1 0.399826294720831 1 0.421153753995895 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579487 chr4:53579475 . . 0 9 hm5C_associated_SNPs_22621 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr17 41561526 41561526 1 + C T GBM 41561537 + 41561517 41561557 41 CTGGACAATCACTTGGGGATCAACGACAAGGACCTTGGTGA CTGGACAATTACTTGGGGATCAACGACAAGGACCTTGGTGA < 41bp 1 0.534189050952576 1 0.411558300256729 experiment 0.931621898094849 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41561537 chr17:41561526 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_22624 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:41561482-41561549
64251 chr19 12924237 12924237 1 + G A GBM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCCCCGTTCTTCCCACCAATATTTCCTGGAACG < 41bp 1 0.116369355896048 1 0.0832952558994293 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924237 nonsynonymous SNV 0.058 2 26 hm5C_associated_SNPs_22625 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924237 12924237 1 + G A GBM 12924253 + 12924233 12924273 41 CACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAG CACCAATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAG < 41bp 1 0.588049260301688 1 0.357743382453918 experiment 0.823901479396624 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924253 chr19:12924237 nonsynonymous SNV 0.058 2 5 hm5C_associated_SNPs_22626 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr20 34832800 34832800 1 + C A GBM 34832788 + 34832768 34832808 41 TACCACCAGCTTGGTGAGATCCCCGCTGACTTCTTCGTAGA TACCACCAGCTTGGTGAGATCCCCGCTGACTTATTCGTAGA < 41bp 1 0.388953724840817 1 0.635536134243011 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AAR2 ENSG00000131043 CDS Human protein_coding chr20:34832788 chr20:34832800 nonsynonymous SNV 0.996 3 33 hm5C_associated_SNPs_22627 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:34832788-34832805
64251 chr12 110032871 110032871 1 + C T GBM 110032880 + 110032860 110032900 41 CTGAATGCCCTCGGCGTGGGCCACGCCTCTCTGGACCAGCT CTGAATGCCCTTGGCGTGGGCCACGCCTCTCTGGACCAGCT < 41bp 1 0.160005014664271 1 0.116679489612579 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MVK ENSG00000110921 CDS Human protein_coding chr12:110032880 chr12:110032871 synonymous SNV . 0 12 hm5C_associated_SNPs_22628 1 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr8 1791522 1791522 1 + C A GBM 1791535 + 1791515 1791555 41 GCAGGAGCTCCTTCCCTTAACAGAGCTGAGAGAGGCATCTG GCAGGAGATCCTTCCCTTAACAGAGCTGAGAGAGGCATCTG < 41bp 1 0.685290537169975 1 0.387626200914383 experiment 0.62941892566005 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1791535 chr8:1791522 nonsynonymous SNV 0.000 1 8 hm5C_associated_SNPs_22629 0 0 4 DDX24 POSTAR2 ENCODE chr8:1791516-1791562
64251 chr2 70164468 70164468 1 + G A GBM 70164486 + 70164466 70164506 41 AGGATCCGGATGGACAGCATCGGCTCCACCGTCTCCTCGGA AGAATCCGGATGGACAGCATCGGCTCCACCGTCTCCTCGGA < 41bp 1 0.758115171442552 1 0.35790342092514 experiment 0.483769657114896 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MXD1 ENSG00000059728 CDS Human protein_coding chr2:70164486 chr2:70164468 synonymous SNV . 0 3 hm5C_associated_SNPs_22630 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:70164435-70164479
64251 chr10 70968397 70968397 1 + G A GBM 70968402 + 70968382 70968422 41 ATGCCAGCCTTATTCGAGATCTCCAGAAAGAACTAGATGGT ATGCCAGCCTTATTCAAGATCTCCAGAAAGAACTAGATGGT < 41bp 1 0.758263998135816 1 0.900284349918365 experiment 0.483472003728367 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968402 chr10:70968397 nonsynonymous SNV 0.902 3 16 hm5C_associated_SNPs_22631 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70968366-70968418
64251 chr3 169953103 169953103 1 + G A GBM 169953106 + 169953086 169953126 41 TGTGTTCTTTTGACAACGAACAGCTCTTCACCATGAAATGG TGTGTTCTTTTGACAACAAACAGCTCTTCACCATGAAATGG < 41bp 1 0.547287000129407 1 0.245655387639999 experiment 0.905425999741187 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169953106 chr3:169953103 nonsynonymous SNV 0.655 1 18 hm5C_associated_SNPs_22632 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:169953080-169953119
64251 chr3 41275099 41275099 1 + G A GBM 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGCTGAAATTCTTTCTAACCTCACTTGCAAT < 41bp 1 0.100570993778169 1 0.228108555078506 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275099 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_22635 0 0 36 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr11 44193288 44193288 1 + C A GBM 44193285 + 44193265 44193305 41 TGAAGAATGGAATGACCCTCCTGCTGTGGTAAGTGAATTCC TGAAGAATGGAATGACCCTCCTGATGTGGTAAGTGAATTCC < 41bp 1 0.482027194524968 1 0.235567897558212 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44193285 chr11:44193288 nonsynonymous SNV 0.900 1 24 hm5C_associated_SNPs_22636 0 0 2 DDX24 POSTAR2 ENCODE chr11:44193221-44193297
64251 chr19 39860404 39860404 1 + G T GBM 39860388 + 39860368 39860408 41 TCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAGGC TCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATTAGGC < 41bp 1 0.140658238693725 1 0.16394630074501 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860388 chr19:39860404 nonsynonymous SNV 0.994 2 37 hm5C_associated_SNPs_22637 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39860351-39860415
64251 chrX 135067833 135067833 1 + G A GBM 135067817 + 135067797 135067837 41 GGCGGCGGAGAGGCTAGAGCCATGGACGAGGAGATCGTGTC GGCGGCGGAGAGGCTAGAGCCATGGACGAGGAGATCATGTC < 41bp 1 0.697803409668467 1 0.760688066482544 experiment 0.604393180663066 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135067817 chrX:135067833 nonsynonymous SNV 0.997 0 37 hm5C_associated_SNPs_22638 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:135067832-135067833
64251 chr15 89849322 89849322 1 + T A GBM 89849336 + 89849316 89849356 41 CATTTTTCCACGAGCTGGTGCAGACAGCTCTGCCATCAGGC CATTTTACCACGAGCTGGTGCAGACAGCTCTGCCATCAGGC < 41bp 1 0.146748229493496 1 0.326030164957047 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89849336 chr15:89849322 nonsynonymous SNV 0.996 2 7 hm5C_associated_SNPs_22639 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:89849274-89849323
64251 chr9 6498120 6498120 1 + G T GBM 6498113 + 6498093 6498133 41 GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTC GTTGAACCTGCTCCTTGGACCTCTGAATGAATAGAACGGTC < 41bp 1 0.359780840096876 1 0.0962094068527222 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498113 chr9:6498120 stopgain 1.000 1 28 hm5C_associated_SNPs_22640 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221665 chr9:6498100-6498120
64251 chr9 6498120 6498120 1 + G T GBM 6498115 + 6498095 6498135 41 TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTCAA TGAACCTGCTCCTTGGACCTCTGAATGAATAGAACGGTCAA < 41bp 1 0.688012904126492 1 0.772886276245117 experiment 0.623974191747017 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498115 chr9:6498120 stopgain 1.000 1 26 hm5C_associated_SNPs_22641 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221665 chr9:6498100-6498120
64251 chr10 93600321 93600321 1 + C A GBM 93600328 + 93600308 93600348 41 TGTCCTTCAGAAACTGTGTACTGTTCAGAGTGTCAACTGCA TGTCCTTCAGAAAATGTGTACTGTTCAGAGTGTCAACTGCA < 41bp 1 0.0706214796620734 1 0.0288072824478149 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93600328 chr10:93600321 nonsynonymous SNV 0.998 1 14 hm5C_associated_SNPs_22642 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:93600321-93600363
64251 chr7 135333182 135333182 1 + G T GBM 135333200 + 135333180 135333220 41 GAGAATCACTACAAAAGAAACTTCTGGACATTGAAGGATTA GATAATCACTACAAAAGAAACTTCTGGACATTGAAGGATTA < 41bp 1 0.0759965632164197 1 0.181997925043106 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135333200 chr7:135333182 stopgain 1.000 1 3 hm5C_associated_SNPs_22643 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr7:135333151-135333191
64251 chrX 2641360 2641360 1 + G T GBM 2641365 + 2641345 2641385 41 TGTCTTGCAGGAAAAGGAGGCAGTGATGGTGGAGGCAGCCA TGTCTTGCAGGAAAATGAGGCAGTGATGGTGGAGGCAGCCA < 41bp 1 0.32168110425359 1 0.451893866062164 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641365 chrX:2641360 stopgain 0.002 0 16 hm5C_associated_SNPs_22646 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:2641340-2641360
64251 chrX 2641360 2641360 1 + G T GBM 2641380 + 2641360 2641400 41 GGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGA TGAGGCAGTGATGGTGGAGGCAGCCACAGGAAAGAAGGGGA < 41bp 1 0.334543927290002 1 0.54912132024765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641380 chrX:2641360 stopgain 0.002 0 1 hm5C_associated_SNPs_22647 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:2641340-2641360
64251 chr20 37632428 37632428 1 + C A GBM 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTTGTGTCGATGCTCATCGAGAAGGCTCGAGCACT < 41bp 1 0.330100512679031 1 0.0897463858127594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632428 nonsynonymous SNV 0.896 1 28 hm5C_associated_SNPs_22648 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:37632381-37632471
64251 chr2 192141643 192141643 1 + A T GBM 192141649 + 192141629 192141669 41 AAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGA AAATGGAGGTGAAATCCTCACTTCTGGACAATATGATTGGA < 41bp 1 0.215198385555562 1 0.26721778512001 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141649 chr2:192141643 nonsynonymous SNV 0.920 0 15 hm5C_associated_SNPs_22649 0 0 1 GRWD1 POSTAR2 ENCODE chr2:192141642-192141755
64251 chr11 65402835 65402835 1 + G A GBM 65402834 + 65402814 65402854 41 CAACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATG CAACACGCCCTCCCTGCTGGCACTGCGCCATGTCCTGGATG < 41bp 1 0.0879763060239635 1 0.0304461419582367 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402834 chr11:65402835 synonymous SNV . 0 22 hm5C_associated_SNPs_22652 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402835 65402835 1 + G A GBM 65402836 + 65402816 65402856 41 ACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGAT ACACGCCCTCCCTGCTGGCACTGCGCCATGTCCTGGATGAT < 41bp 1 0.161472167727477 1 0.245578765869141 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402836 chr11:65402835 synonymous SNV . 0 20 hm5C_associated_SNPs_22653 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402835 65402835 1 + G A GBM 65402839 + 65402819 65402859 41 CGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCC CGCCCTCCCTGCTGGCACTGCGCCATGTCCTGGATGATGCC < 41bp 1 0.312817056104366 1 0.922525763511658 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402839 chr11:65402835 synonymous SNV . 0 17 hm5C_associated_SNPs_22654 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402835 65402835 1 + G A GBM 65402841 + 65402821 65402861 41 CCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTC CCCTCCCTGCTGGCACTGCGCCATGTCCTGGATGATGCCTC < 41bp 1 0.065248134491904 1 0.108941733837128 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402841 chr11:65402835 synonymous SNV . 0 15 hm5C_associated_SNPs_22655 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402835 65402835 1 + G A GBM 65402842 + 65402822 65402862 41 CCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTCC CCTCCCTGCTGGCACTGCGCCATGTCCTGGATGATGCCTCC < 41bp 1 0.0703737984774781 1 0.403270244598389 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402842 chr11:65402835 synonymous SNV . 0 14 hm5C_associated_SNPs_22656 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr14 23239044 23239044 1 + G A GBM 23239030 + 23239010 23239050 41 TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGAGCCAGC < 41bp 1 0.27086887381643 1 0.0369770228862762 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239030 chr14:23239044 nonsynonymous SNV 0.994 3 35 hm5C_associated_SNPs_22657 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:23239020-23239048
64251 chr1 90473022 90473022 1 + C T GBM 90473035 + 90473015 90473055 41 TGGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACT TGGTGGTTGATTTGAGAGCTCCTACCGGAATAGCCTTGACT < 41bp 1 0.0669111484839683 1 0.039126455783844 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473035 chr1:90473022 stopgain 1.000 1 8 hm5C_associated_SNPs_22659 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr1 90473022 90473022 1 + C T GBM 90473036 + 90473016 90473056 41 GGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACTC GGTGGTTGATTTGAGAGCTCCTACCGGAATAGCCTTGACTC < 41bp 1 0.594481340638885 1 0.307638823986053 experiment 0.81103731872223 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473036 chr1:90473022 stopgain 1.000 1 7 hm5C_associated_SNPs_22660 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:90472997-90473050
64251 chr16 68373351 68373351 1 + G A GBM 68373342 + 68373322 68373362 41 TGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTT TGCAGACCAGCCTCGGAGAGCAGGTCATCATCCCTCCCGTT < 41bp 1 0.615524017956243 1 0.5197873711586 experiment 0.768951964087513 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373342 chr16:68373351 nonsynonymous SNV 0.290 0 30 hm5C_associated_SNPs_22662 0 0 3 LIN28B POSTAR2 ENCODE chr16:68373297-68373388
64251 chr6 42974763 42974763 1 + G A GBM 42974749 + 42974729 42974769 41 CCACTCAGTGACCTCAAATTCAAGGAGGTGAAGCGGGCAGG CCACTCAGTGACCTCAAATTCAAGGAGGTGAAGCAGGCAGG < 41bp 1 0.751098829485175 1 0.784631133079529 experiment 0.497802341029649 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974749 chr6:42974763 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_22665 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42974736-42974797
64251 chr6 42974763 42974763 1 + G A GBM 42974762 + 42974742 42974782 41 TCAAATTCAAGGAGGTGAAGCGGGCAGGACTCAACGAGATG TCAAATTCAAGGAGGTGAAGCAGGCAGGACTCAACGAGATG < 41bp 1 0.540050473667842 1 0.446137964725494 experiment 0.919899052664317 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974762 chr6:42974763 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_22666 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42974736-42974797
64251 chr6 42974763 42974763 1 + G A GBM 42974771 + 42974751 42974791 41 AGGAGGTGAAGCGGGCAGGACTCAACGAGATGGTGGAGTAC AGGAGGTGAAGCAGGCAGGACTCAACGAGATGGTGGAGTAC < 41bp 1 0.584317655248648 1 0.796674728393555 experiment 0.831364689502704 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974771 chr6:42974763 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_22667 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42974736-42974797
64251 chr11 988608 988608 1 + C T GBM 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGTGACCGC < 41bp 1 0.710230516823358 1 0.465513527393341 experiment 0.579538966353283 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988608 synonymous SNV . 0 35 hm5C_associated_SNPs_22668 0 0 6 BUD13 POSTAR2 ENCODE chr11:988519-988630
64251 chr12 104336876 104336876 1 + C T GBM 104336862 + 104336842 104336882 41 AATTTTGTAGGCTGAATCTTCTCCATTTGTTGAGCGACTTC AATTTTGTAGGCTGAATCTTCTCCATTTGTTGAGTGACTTC < 41bp 1 0.75868157749118 1 0.933836460113525 experiment 0.482636845017639 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336862 chr12:104336876 stopgain 1.000 1 35 hm5C_associated_SNPs_22669 0 0 48 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:104336849-104336945
64251 chr10 96162374 96162374 1 + G A GBM 96162358 + 96162338 96162378 41 TTGCCTCCTGGGGCGGCCGCCACCCACCCCCAGATGGTGGG TTGCCTCCTGGGGCGGCCGCCACCCACCCCCAGATGATGGG < 41bp 1 0.440324753330938 1 0.338912963867188 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D12 ENSG00000108239 CDS Human protein_coding chr10:96162358 chr10:96162374 nonsynonymous SNV 0.965 0 37 hm5C_associated_SNPs_22676 0 0 3 AARS POSTAR2 ENCODE chr10:96162346-96162390
64251 chr19 39944053 39944053 1 + G A GBM 39944044 + 39944024 39944064 41 GCAGTGAGAAAGAAGAAGAGCCTGAGGACGAAGAGGAGGAG GCAGTGAGAAAGAAGAAGAGCCTGAGGACAAAGAGGAGGAG < 41bp 1 0.30581904235062 1 0.14451140165329 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944044 chr19:39944053 nonsynonymous SNV 0.976 2 30 hm5C_associated_SNPs_22678 0 0 17 FBL POSTAR2 GSE43666,GSM1067865 chr19:39944033-39944069
64251 chrX 47102865 47102865 1 + C T GBM 47102871 + 47102851 47102891 41 TTCCTGTCTACCTGCGGGAGCGCACCCCTGCCCGTGACTAC TTCCTGTCTACCTGTGGGAGCGCACCCCTGCCCGTGACTAC < 41bp 1 0.139415954579793 1 0.144634395837784 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47102871 chrX:47102865 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_22680 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:47102838-47102872
64251 chr19 39944022 39944022 1 + G A GBM 39944021 + 39944001 39944041 41 CGAAGAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG CGAAGAGCGGCGGAGTGCAGCAGGCAGTGAGAAAGAAGAAG < 41bp 1 0.57748492933296 1 0.806784451007843 experiment 0.84503014133408 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944021 chr19:39944022 synonymous SNV . 0 22 hm5C_associated_SNPs_22682 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr19 39944022 39944022 1 + G A GBM 39944025 + 39944005 39944045 41 GAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC GAGCGGCGGAGTGCAGCAGGCAGTGAGAAAGAAGAAGAGCC < 41bp 1 0.445755155830932 1 0.612486600875854 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944025 chr19:39944022 synonymous SNV . 0 18 hm5C_associated_SNPs_22683 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr1 117638845 117638845 1 + C T GBM 117638864 + 117638844 117638884 41 GCCACCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGA GTCACCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGA < 41bp 1 0.119947459019403 1 0.370049595832825 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117638864 chr1:117638845 nonsynonymous SNV 0.998 1 2 hm5C_associated_SNPs_22684 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:117638774-117638846
64251 chr12 14577544 14577544 1 + G T GBM 14577553 + 14577533 14577573 41 TATAGCCTCTAGTGAAATAACTTCTGTTGATCTGGCTTCTG TATAGCCTCTATTGAAATAACTTCTGTTGATCTGGCTTCTG < 41bp 1 0.421331093605921 1 0.0397110879421234 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577553 chr12:14577544 nonsynonymous SNV 0.047 1 12 hm5C_associated_SNPs_22687 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr12:14577498-14577547
64251 chr12 14577544 14577544 1 + G T GBM 14577556 + 14577536 14577576 41 AGCCTCTAGTGAAATAACTTCTGTTGATCTGGCTTCTGGAG AGCCTCTATTGAAATAACTTCTGTTGATCTGGCTTCTGGAG < 41bp 1 0.277165696863965 1 0.0738688111305237 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577556 chr12:14577544 nonsynonymous SNV 0.047 1 9 hm5C_associated_SNPs_22688 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr12:14577498-14577547
64251 chr17 81042984 81042984 1 + C T GBM 81042993 + 81042973 81043013 41 CTTCACGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAA CTTCACGGACTTCTCGGGGGCCAATATTTATTTGGAAAAAA < 41bp 1 0.0337273302589825 1 0.0668265819549561 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METRNL ENSG00000176845 CDS Human protein_coding chr17:81042993 chr17:81042984 nonsynonymous SNV 0.974 3 12 hm5C_associated_SNPs_22690 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:81042914-81042985
64251 chr8 28574483 28574483 1 + T C GBM 28574488 + 28574468 28574508 41 GTGGCCCAGTCCACCTTCTACACTGTCCAGTACAGACCTGG GTGGCCCAGTCCACCCTCTACACTGTCCAGTACAGACCTGG < 41bp 1 0.194353977029339 1 0.0679351389408112 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574488 chr8:28574483 nonsynonymous SNV 0.955 4 16 hm5C_associated_SNPs_22691 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574480-28574520
64251 chr15 41554976 41554976 1 + G A GBM 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTAGATTCATGCGAACTTTGGCTCATTTCCGC < 41bp 1 0.211711661700155 1 0.186836272478104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41554976 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_22692 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41554955-41554984
64251 chr19 10886491 10886491 1 + G A GBM 10886497 + 10886477 10886517 41 CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAC CAGTTCATCAGCCGAGAGAGCAGCCTCATTCTGGCTGTCAC < 41bp 1 0.216349751467003 1 0.122377097606659 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886497 chr19:10886491 synonymous SNV . 0 15 hm5C_associated_SNPs_22693 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:10886460-10886494
64251 chr9 116750662 116750662 1 + G A GBM 116750645 + 116750625 116750665 41 GAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGG GAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCAAGG < 41bp 1 0.39055903579006 1 0.397984981536865 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116750645 chr9:116750662 nonsynonymous SNV 0.785 0 38 hm5C_associated_SNPs_22694 0 0 1 BUD13 POSTAR2 ENCODE chr9:116750564-116750747
64251 chr19 7676675 7676675 1 + G A GBM 7676663 + 7676643 7676683 41 GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCT GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCAGACAGCCT < 41bp 1 0.28202494998248 1 0.180278867483139 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676663 chr19:7676675 synonymous SNV . 0 33 hm5C_associated_SNPs_22695 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr19 34868415 34868415 1 + G A GBM 34868408 + 34868388 34868428 41 CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGG CATCTTCGCCCCTGTGCCAGCGTGTCCAGAGCGGTGACTGG < 41bp 1 0.218274852404006 1 0.591677308082581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868408 chr19:34868415 nonsynonymous SNV 0.986 4 28 hm5C_associated_SNPs_22696 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr19 34868415 34868415 1 + G A GBM 34868413 + 34868393 34868433 41 TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGGAAGGG TCGCCCCTGTGCCAGCGTGTCCAGAGCGGTGACTGGAAGGG < 41bp 1 0.568260970176269 1 0.407204896211624 experiment 0.863478059647462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868413 chr19:34868415 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_22697 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr6 30857024 30857024 1 + G A GBM 30857005 + 30856985 30857025 41 GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCAG < 41bp 1 0.298583534708145 1 0.310500621795654 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30857005 chr6:30857024 synonymous SNV . 0 40 hm5C_associated_SNPs_22698 0 0 4 BUD13 POSTAR2 ENCODE chr6:30856999-30857068
64251 chr2 242431066 242431066 1 + C A GBM 242431077 + 242431057 242431097 41 CCAGCGTGTCCAGGGCAGACCACAGTGCAGCTGTCGAGGTA CCAGCGTGTACAGGGCAGACCACAGTGCAGCTGTCGAGGTA < 41bp 1 0.574516597496385 1 0.190668076276779 experiment 0.85096680500723 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FARP2 ENSG00000006607 CDS Human protein_coding chr2:242431077 chr2:242431066 nonsynonymous SNV 0.984 4 10 hm5C_associated_SNPs_22699 0 0 1 PRPF8 POSTAR2 ENCODE chr2:242431064-242431137
64251 chr9 35846887 35846887 1 + G A GBM 35846905 + 35846885 35846925 41 CTGCTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGT CTACTCTGCCTGAGCAACCTCATGTTTCTGCCACCTGTGGT < 41bp 1 0.279378527372277 1 0.412525296211243 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35846905 chr9:35846887 synonymous SNV . 0 3 hm5C_associated_SNPs_22700 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:35846886-35846887
64251 chr17 7401132 7401132 1 + G A GBM 7401133 + 7401113 7401153 41 GACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGAC GACCAGGTTGGCGTGCCCCACTCCATTGCTGCCAACATGAC < 41bp 1 0.760712267677142 1 0.937876224517822 experiment 0.478575464645715 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7401133 chr17:7401132 nonsynonymous SNV 0.998 3 20 hm5C_associated_SNPs_22701 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr17:7401111-7401135
64251 chr9 130549815 130549815 1 + C T GBM 130549823 + 130549803 130549843 41 ATTACAGCCTTGCGGGAGATCAAGATCCTTCAGCTTCTAAA ATTACAGCCTTGTGGGAGATCAAGATCCTTCAGCTTCTAAA < 41bp 1 0.781672496816087 1 0.693881273269653 experiment 0.436655006367827 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130549823 chr9:130549815 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_22702 0 0 8 DDX24 POSTAR2 ENCODE chr9:130549796-130549938
64251 chr1 147091673 147091673 1 + C G GBM 147091688 + 147091668 147091708 41 AAACTCTGAAATGGAAGGGCCGAATGTCCCCAACCCTGCAT AAACTGTGAAATGGAAGGGCCGAATGTCCCCAACCCTGCAT < 41bp 1 0.234847671810323 1 0.156565189361572 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091688 chr1:147091673 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_22703 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:147091660-147091680
64251 chr10 6265943 6265943 1 + C T GBM 6265930 + 6265910 6265950 41 TTCAATTTCAGAGGAGATGCCCTACCTGAAATGCCCTCTTC TTCAATTTCAGAGGAGATGCCCTACCTGAAATGTCCTCTTC < 41bp 1 0.0376338096122034 1 0.0417560636997223 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6265930 chr10:6265943 synonymous SNV . 0 34 hm5C_associated_SNPs_22706 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:6265942-6265967
64251 chr15 78838067 78838067 1 + C T GBM 78838052 + 78838032 78838072 41 TTTCAGCTCTATCAGAGTGACCCTAGTGGAAATTACGGGGG TTTCAGCTCTATCAGAGTGACCCTAGTGGAAATTATGGGGG < 41bp 1 0.547878959369124 1 0.0918323397636414 experiment 0.904242081261751 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78838052 chr15:78838067 synonymous SNV . 0 36 hm5C_associated_SNPs_22707 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:78838027-78838094
64251 chr15 78838067 78838067 1 + C T GBM 78838053 + 78838033 78838073 41 TTCAGCTCTATCAGAGTGACCCTAGTGGAAATTACGGGGGA TTCAGCTCTATCAGAGTGACCCTAGTGGAAATTATGGGGGA < 41bp 1 0.218995414603346 1 0.136565089225769 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78838053 chr15:78838067 synonymous SNV . 0 35 hm5C_associated_SNPs_22708 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:78838027-78838094
64251 chr15 78838067 78838067 1 + C T GBM 78838054 + 78838034 78838074 41 TCAGCTCTATCAGAGTGACCCTAGTGGAAATTACGGGGGAT TCAGCTCTATCAGAGTGACCCTAGTGGAAATTATGGGGGAT < 41bp 1 0.66564434581275 1 0.114345341920853 experiment 0.6687113083745 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78838054 chr15:78838067 synonymous SNV . 0 34 hm5C_associated_SNPs_22709 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:78838027-78838094
64251 chr19 33202795 33202795 1 + G A GBM 33202807 + 33202787 33202827 41 ATATCCACGTGACTGTTCAGCCAAAGTATAAACACGTTTAT ATATCCACATGACTGTTCAGCCAAAGTATAAACACGTTTAT < 41bp 1 0.260442057484818 1 0.0840199887752533 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202807 chr19:33202795 nonsynonymous SNV 0.343 1 9 hm5C_associated_SNPs_22710 0 0 29 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33202688-33202963
64251 chr7 65419186 65419186 1 + G A GBM 65419170 + 65419150 65419190 41 TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCATCAC < 41bp 1 0.768704560500717 1 0.826556980609894 experiment 0.462590878998566 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419170 chr7:65419186 nonsynonymous SNV 0.640 1 37 hm5C_associated_SNPs_22712 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:65419150-65419210
64251 chr1 110561677 110561677 1 + G A GBM 110561676 + 110561656 110561696 41 CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTGC CTCTCTTACCTTTCCAGGGTCATCTACTCAATTTGAGCTGC < 41bp 1 0.110972494006931 1 0.0448278486728668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561676 chr1:110561677 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_22713 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:110561666-110561679
64251 chr19 10823284 10823284 1 + G A GBM 10823292 + 10823272 10823312 41 ATGTTCGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCT ATGTTCGACTGCATCTTCCCCACACGGACAGCGGTGAGGCT < 41bp 1 0.188370266570212 1 0.0784645080566406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823292 chr19:10823284 nonsynonymous SNV 0.953 3 13 hm5C_associated_SNPs_22715 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823272-10823303
64251 chr1 63282295 63282295 1 + C T GBM 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CGGGATGTACAATAGAGGATCATGTAATTGCAGGAAATGTA < 41bp 1 0.19878494114356 1 0.083753377199173 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282295 synonymous SNV . 0 23 hm5C_associated_SNPs_22716 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr2 9621457 9621457 1 + C T GBM 9621454 + 9621434 9621474 41 CATTCCCCTGGAGGAGTACGCTGCGAACCTAAAGAGCATGG CATTCCCCTGGAGGAGTACGCTGTGAACCTAAAGAGCATGG < 41bp 1 0.672363570411505 1 0.176544576883316 experiment 0.65527285917699 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IAH1 ENSG00000134330 CDS Human protein_coding chr2:9621454 chr2:9621457 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_22717 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:9621444-9621467
64251 chr17 47119680 47119680 1 + G A GBM 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCGAGAATTGTTGCAGGGCCAAGCAGGAAATAATGAAGA < 41bp 1 0.0792972374781506 1 0.24129530787468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119680 nonsynonymous SNV 0.990 4 23 hm5C_associated_SNPs_22718 0 0 22 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr17 47119680 47119680 1 + G A GBM 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCGAGAATTGTTGCAGGGCCAAGCAGGAAATAATGAAGAA < 41bp 1 0.298415086603104 1 0.253014177083969 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119680 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_22719 0 0 22 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr3 52325024 52325024 1 + G A GBM 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCAGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG < 41bp 1 0.588241286294685 1 0.786017179489136 experiment 0.823517427410629 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325024 synonymous SNV . 0 7 hm5C_associated_SNPs_22720 0 0 4 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr4 154216632 154216632 1 + G A GBM 154216623 + 154216603 154216643 41 AACGAGCTGGCCGACCAGGACTTCCCCTTGCACCCGCGGGA AACGAGCTGGCCGACCAGGACTTCCCCTTACACCCGCGGGA < 41bp 1 0.121802078416538 1 0.0656720995903015 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154216623 chr4:154216632 synonymous SNV . 0 30 hm5C_associated_SNPs_22721 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:154216615-154216632
64251 chr12 132562076 132562076 1 + C T GBM 132562071 + 132562051 132562091 41 ATTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGCTCCA ATTCAGCAGCAGGTGGTGACCACGGTGTCGGCCCCGCTCCA < 41bp 1 0.765523191339962 1 0.926927030086517 experiment 0.468953617320075 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132562071 chr12:132562076 nonsynonymous SNV 0.021 4 26 hm5C_associated_SNPs_22722 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132562071-132562096
64251 chr1 977058 977058 1 + C T GBM 977045 + 977025 977065 41 GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGTGCTCCGG < 41bp 1 0.100250629716647 1 0.50959575176239 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:977045 chr1:977058 nonsynonymous SNV 0.946 3 34 hm5C_associated_SNPs_22724 0 0 4 FXR2 POSTAR2 ENCODE chr1:977048-977074
64251 chr8 124219785 124219785 1 + C T GBM 124219776 + 124219756 124219796 41 CCCCGAGTCCCCAGGCCCACCTCTCCCCGCGGCCCCACGAC CCCCGAGTCCCCAGGCCCACCTCTCCCCGTGGCCCCACGAC < 41bp 1 0.174898339958376 1 0.357926160097122 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM83A ENSG00000147689 CDS Human protein_coding chr8:124219776 chr8:124219785 nonsynonymous SNV 0.052 3 30 hm5C_associated_SNPs_22725 0 0 6 HNRNPK POSTAR2 ENCODE chr8:124219713-124219803
64251 chr10 43604497 43604497 1 + A T GBM 43604501 + 43604481 43604521 41 CTGGTTCTCAACCGGAACCTCTCCATCTCGGAGAACCGCAC CTGGTTCTCAACCGGATCCTCTCCATCTCGGAGAACCGCAC < 41bp 1 0.67097969763625 1 0.943675637245178 experiment 0.6580406047275 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RET ENSG00000165731 CDS Human protein_coding chr10:43604501 chr10:43604497 nonsynonymous SNV 0.257 2 17 hm5C_associated_SNPs_22726 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr1 116940613 116940613 1 + A G GBM 116940615 + 116940595 116940635 41 GAGATAGTGTTTGCCAGGACCTCCCCTCAGCAGAAGCTCAT GAGATAGTGTTTGCCAGGGCCTCCCCTCAGCAGAAGCTCAT < 41bp 1 0.199482733882505 1 0.128271877765656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116940615 chr1:116940613 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_22727 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116940516-116940641
64251 chr15 64966530 64966530 1 + G A GBM 64966550 + 64966530 64966570 41 GTCCTAATTGACTGTCCCCACCCAAACTGCAACAAGAAGTA ATCCTAATTGACTGTCCCCACCCAAACTGCAACAAGAAGTA < 41bp 1 0.185855514582604 1 0.416562080383301 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64966550 chr15:64966530 nonsynonymous SNV 0.995 1 1 hm5C_associated_SNPs_22729 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:64966519-64966557
64251 chr1 179876983 179876983 1 + G A GBM 179876984 + 179876964 179877004 41 ACTTCACAGCTCATGATAAGCAACCTTCAGTGCTAAGTAAG ACTTCACAGCTCATGATAAACAACCTTCAGTGCTAAGTAAG < 41bp 1 0.32938749922356 1 0.203705281019211 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179876984 chr1:179876983 synonymous SNV . 0 20 hm5C_associated_SNPs_22730 0 0 3 BUD13 POSTAR2 ENCODE chr1:179876928-179877005
64251 chr19 48954443 48954443 1 + C T GBM 48954428 + 48954408 48954448 41 AGCTGGAGCCGCCGGGAGCCCTTCCTGCTCAGTGGCGGGGA AGCTGGAGCCGCCGGGAGCCCTTCCTGCTCAGTGGTGGGGA < 41bp 1 0.232245655739985 1 0.341845214366913 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48954428 chr19:48954443 synonymous SNV . 0 36 hm5C_associated_SNPs_22732 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:48954440-48954460
64251 chr7 128486412 128486412 1 + G A GBM 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTCGCTGTGCCCAAGAGCCCCTTCCAAGTGGGCGTGACC < 41bp 1 0.0207994257200362 1 0.0403722822666168 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486412 nonsynonymous SNV 0.991 3 28 hm5C_associated_SNPs_22733 1 0 5 FMR1 POSTAR2 ENCODE chr7:128486383-128486481
64251 chr12 111072571 111072571 1 + C T GBM 111072570 + 111072550 111072590 41 GCATGGCTTTTTACAGCAGCCCGGAAATTCTGAGGGTAAGA GCATGGCTTTTTACAGCAGCCTGGAAATTCTGAGGGTAAGA < 41bp 1 0.620362030808678 1 0.258451461791992 experiment 0.759275938382645 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111072570 chr12:111072571 nonsynonymous SNV 0.974 0 22 hm5C_associated_SNPs_22734 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:111072537-111072575
64251 chr17 79990839 79990839 1 + G A GBM 79990825 + 79990805 79990845 41 TCCCACCTTTTTCCCAAGGACGTCTTTCTGATCTGCTTCTC TCCCACCTTTTTCCCAAGGACGTCTTTCTGATCTACTTCTC < 41bp 1 0.180165786305939 1 0.056683748960495 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990825 chr17:79990839 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_22735 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221665 chr17:79990820-79990840
64251 chr6 27806760 27806760 1 + G A GBM 27806746 + 27806726 27806766 41 AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTAGCCAAG < 41bp 1 0.604153012095187 1 0.207083731889725 experiment 0.791693975809627 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806746 chr6:27806760 synonymous SNV . 0 35 hm5C_associated_SNPs_22738 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806700-27806760
64251 chrX 54838631 54838631 1 + C A GBM 54838641 + 54838621 54838661 41 AGAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCC AGAATGACCAATTGTACATTCTTCTCAGCACCTTAGAGCCC < 41bp 1 0.129012718763052 1 0.080108255147934 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54838641 chrX:54838631 nonsynonymous SNV 0.975 3 11 hm5C_associated_SNPs_22741 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:54838607-54838635
64251 chrX 73040656 73040656 1 - T A GBM 73040659 - 73040639 73040679 41 AAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATCT AAGACTCTTGAACTTGTGAACTGTTGTGAAATGCAGAATCT < 41bp 1 0.0932628791936859 1 0.0979996919631958 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040659 chrX:73040656 . . 0 24 hm5C_associated_SNPs_22742 0 0 68 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040656 73040656 1 - T A GBM 73040667 - 73040647 73040687 41 ATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAATG ATAAATGGAAGACTCTTGAACTTGTGAACTGTTGTGAAATG < 41bp 1 0.099350373904115 1 0.0913731455802917 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040667 chrX:73040656 . . 0 32 hm5C_associated_SNPs_22743 0 0 68 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040656 73040656 1 - T A GBM 73040673 - 73040653 73040693 41 GCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGATGT GCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGTTGT < 41bp 1 0.303582220180761 1 0.532614171504974 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040673 chrX:73040656 . . 0 38 hm5C_associated_SNPs_22744 0 0 68 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040656 73040656 1 - T A GBM 73040675 - 73040655 73040695 41 AAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGAT AAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGTT < 41bp 1 0.0627413376741986 1 0.053968071937561 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040675 chrX:73040656 . . 0 40 hm5C_associated_SNPs_22745 0 0 68 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chr7 150068992 150068992 1 + C T GBM 150068972 + 150068952 150068992 41 GCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGC GCAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGT < 41bp 1 0.642076071618576 1 0.487643003463745 experiment 0.715847856762847 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068972 chr7:150068992 nonsynonymous SNV 0.451 0 41 hm5C_associated_SNPs_22747 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068992 150068992 1 + C T GBM 150068973 + 150068953 150068993 41 CAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGCG CAGCCAAGGCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGTG < 41bp 1 0.797232220000533 1 0.704748272895813 experiment 0.405535559998935 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068973 chr7:150068992 nonsynonymous SNV 0.451 0 40 hm5C_associated_SNPs_22748 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr7 150068992 150068992 1 + C T GBM 150068984 + 150068964 150069004 41 CTGGGGCCCCGGCCCAGGGGCCGCCCCGCGGTGACCGCCCC CTGGGGCCCCGGCCCAGGGGCCGCCCCGTGGTGACCGCCCC < 41bp 1 0.314884529592546 1 0.360635191202164 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068984 chr7:150068992 nonsynonymous SNV 0.451 0 29 hm5C_associated_SNPs_22749 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150068958-150068996
64251 chr19 39398200 39398200 1 + C T GBM 39398207 + 39398187 39398227 41 ACCCCATCCTCGCCCGCCTCCTCCGTGCACACGGAGCCCCT ACCCCATCCTCGCTCGCCTCCTCCGTGCACACGGAGCCCCT < 41bp 1 0.791563410755097 1 0.458749920129776 experiment 0.416873178489806 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398207 chr19:39398200 synonymous SNV . 0 14 hm5C_associated_SNPs_22750 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39398171-39398202
64251 chr19 10823297 10823297 1 + G A GBM 10823292 + 10823272 10823312 41 ATGTTCGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCT ATGTTCGACTGCGTCTTCCCCACACAGACAGCGGTGAGGCT < 41bp 1 0.189350627193704 1 0.0931949019432068 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823292 chr19:10823297 nonsynonymous SNV 0.929 3 26 hm5C_associated_SNPs_22752 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823272-10823303
64251 chr10 115489209 115489209 1 + G C GBM 115489196 + 115489176 115489216 41 CAGGGTGAATGACAGAGTTGCCAGGCACTTTGAGTCTCAGT CAGGGTGAATGACAGAGTTGCCAGGCACTTTGACTCTCAGT < 41bp 1 0.327874875052391 1 0.263132154941559 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115489196 chr10:115489209 nonsynonymous SNV 0.991 4 34 hm5C_associated_SNPs_22753 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:115489190-115489228
64251 chr1 7796551 7796551 1 + G A GBM 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCGGAATGACCCTACTCCACCTGACCGCTGCCCAGGG < 41bp 1 0.265125135925401 1 0.406592071056366 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796551 nonsynonymous SNV 0.997 4 28 hm5C_associated_SNPs_22754 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:7796533-7796565
64251 chr12 101711355 101711355 1 + C T GBM 101711340 + 101711320 101711360 41 GGGATGGTGGCAGAGGAAATCGAAGAGGAACCTGCCGCAGG GGGATGGTGGCAGAGGAAATCGAAGAGGAACCTGCTGCAGG < 41bp 1 0.651425400045708 1 0.85453075170517 experiment 0.697149199908584 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711340 chr12:101711355 synonymous SNV . 0 36 hm5C_associated_SNPs_22755 0 0 5 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711355 101711355 1 + C T GBM 101711351 + 101711331 101711371 41 AGAGGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAG AGAGGAAATCGAAGAGGAACCTGCTGCAGGAGATGATGAAG < 41bp 1 0.446739014053192 1 0.665351390838623 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711351 chr12:101711355 synonymous SNV . 0 25 hm5C_associated_SNPs_22756 0 0 5 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711355 101711355 1 + C T GBM 101711354 + 101711334 101711374 41 GGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGT GGAAATCGAAGAGGAACCTGCTGCAGGAGATGATGAAGAGT < 41bp 1 0.537051447031218 1 0.667464792728424 experiment 0.925897105937564 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711354 chr12:101711355 synonymous SNV . 0 22 hm5C_associated_SNPs_22757 0 0 5 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711355 101711355 1 + C T GBM 101711357 + 101711337 101711377 41 AATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTTGG AATCGAAGAGGAACCTGCTGCAGGAGATGATGAAGAGTTGG < 41bp 1 0.743188149238286 1 0.79108989238739 experiment 0.513623701523428 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711357 chr12:101711355 synonymous SNV . 0 19 hm5C_associated_SNPs_22758 0 0 5 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr3 126741046 126741046 1 + G A GBM 126741032 + 126741012 126741052 41 CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCGCGGGAA CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCACGGGAA < 41bp 1 0.642755477475913 1 0.966074228286743 experiment 0.714489045048175 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126741032 chr3:126741046 nonsynonymous SNV 0.910 4 35 hm5C_associated_SNPs_22759 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:126741015-126741050
64251 chr10 5791130 5791130 1 + C A GBM 5791136 + 5791116 5791156 41 CTTACGTCCAAATCCGAGATCTCCACGGGATCCTCAGGACT CTTACGTCCAAATCAGAGATCTCCACGGGATCCTCAGGACT < 41bp 1 0.562728038908868 1 0.645617485046387 experiment 0.874543922182264 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5791136 chr10:5791130 synonymous SNV . 0 15 hm5C_associated_SNPs_22766 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5791109-5791263
64251 chr1 31897702 31897702 1 + G A GBM 31897691 + 31897671 31897711 41 ATGCTCTGCGTGAGCAGCAGCCGGGACCCCCGGGCTGCCAT ATGCTCTGCGTGAGCAGCAGCCGGGACCCCCAGGCTGCCAT < 41bp 1 0.679931166136295 1 0.872019052505493 experiment 0.640137667727409 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31897691 chr1:31897702 nonsynonymous SNV 0.831 4 32 hm5C_associated_SNPs_22767 0 0 2 PPIG POSTAR2 ENCODE chr1:31897657-31897702
64251 chr11 61631211 61631211 1 + C T GBM 61631203 + 61631183 61631223 41 CAGCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG CAGCCACCTGCAACGTGGAGCAGTCCTTTTTCAACGACTGG < 41bp 1 0.0277733927319981 1 0.336548149585724 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61631203 chr11:61631211 synonymous SNV . 0 29 hm5C_associated_SNPs_22768 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61631192-61631224
64251 chr2 128867271 128867271 1 + A G GBM 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGGCTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA < 41bp 1 0.0435439589332206 1 0.0645526349544525 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867271 nonsynonymous SNV 0.993 0 5 hm5C_associated_SNPs_22769 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:128867244-128867278
64251 chr12 95877031 95877031 1 + G A GBM 95877015 + 95876995 95877035 41 AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAAAAAA < 41bp 1 0.333463057462786 1 0.360905647277832 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877015 chr12:95877031 synonymous SNV . 0 37 hm5C_associated_SNPs_22770 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:95876988-95877032
64251 chr19 13051173 13051173 1 + G T GBM 13051158 + 13051138 13051178 41 GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGCCACC GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTTCCACC < 41bp 1 0.322305552724869 1 0.309778839349747 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051158 chr19:13051173 synonymous SNV . 0 36 hm5C_associated_SNPs_22771 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051173 13051173 1 + G T GBM 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTCCTTCCACCCAAGAAGATAAAG < 41bp 1 0.122909121322613 1 0.125648349523544 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051173 synonymous SNV . 0 23 hm5C_associated_SNPs_22772 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051173 13051173 1 + G T GBM 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTTCCACCCAAGAAGATAAAGGATC < 41bp 1 0.398708703373437 1 0.293612778186798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051173 synonymous SNV . 0 19 hm5C_associated_SNPs_22773 0 0 46 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr2 11300636 11300636 1 + C T GBM 11300656 + 11300636 11300676 41 CGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT TGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT < 41bp 1 0.197515968967083 1 0.19433605670929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300656 chr2:11300636 nonsynonymous SNV 0.753 1 1 hm5C_associated_SNPs_22774 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:11300618-11300659
64251 chr3 184021749 184021749 1 + T C GBM 184021744 + 184021724 184021764 41 GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTGTGGCATAGTG GCTCTTTGTAGTCAGGAGCTCTTCTCGCCTGTGGCATAGTG < 41bp 1 0.114774331272754 1 0.139977902173996 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021744 chr3:184021749 synonymous SNV . 0 26 hm5C_associated_SNPs_22775 0 0 16 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184021720-184021789
64251 chr12 14650695 14650695 1 + G A GBM 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTCAGAAGCCACACTTGAAATTAGCACGCGTTCA < 41bp 1 0.686021244508292 1 0.210251003503799 experiment 0.627957510983417 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650695 synonymous SNV . 0 27 hm5C_associated_SNPs_22776 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14650691-14650703
64251 chr6 36564707 36564707 1 + C T GBM 36564724 + 36564704 36564744 41 TCCCCGAGATGCAGCTGATGCAGTCCGAGAGCTAGATGGAA TCCTCGAGATGCAGCTGATGCAGTCCGAGAGCTAGATGGAA < 41bp 1 0.259686846328752 1 0.204795509576797 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36564724 chr6:36564707 synonymous SNV . 0 4 hm5C_associated_SNPs_22777 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:36564702-36564730
64251 chr3 184042686 184042686 1 + G T GBM 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAGGAACGAGGACGCCTTAAGGAAGAG < 41bp 1 0.612277056560979 1 0.557397305965424 experiment 0.775445886878042 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042686 synonymous SNV . 0 32 hm5C_associated_SNPs_22778 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr3 184042686 184042686 1 + G T GBM 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAGGAACGAGGACGCCTTAAGGAAGAGCTGGAA < 41bp 1 0.46067850701713 1 0.426222860813141 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042686 synonymous SNV . 0 26 hm5C_associated_SNPs_22779 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr3 184042686 184042686 1 + G T GBM 184042684 + 184042664 184042704 41 AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG AGGCAGAGGAACGAGGACGCCTTAAGGAAGAGCTGGAAGAG < 41bp 1 0.515401382863695 1 0.466239184141159 experiment 0.969197234272611 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042684 chr3:184042686 synonymous SNV . 0 23 hm5C_associated_SNPs_22780 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr17 57738898 57738898 1 + T C GBM 57738906 + 57738886 57738926 41 ACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATAC ACTTTGGTATCCCTTTGGACCAGGGACAGCTCAACAAATAC < 41bp 1 0.629166476426427 1 0.74748158454895 experiment 0.741667047147146 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57738906 chr17:57738898 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_22782 0 0 45 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:57738805-57738925
64251 chr14 76638263 76638263 1 + T C GBM 76638267 + 76638247 76638287 41 TAATCTTCTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAG TAATCTTCTGCCCAAGCGGGCTCCTGATCATTGTTCTGAAG < 41bp 1 0.229022283244076 1 0.106115698814392 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76638267 chr14:76638263 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_22785 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr14:76638194-76638323
64251 chr5 176687001 176687001 1 + C T GBM 176686992 + 176686972 176687012 41 CTGATTTTCCTGCTTTAGGTCGGTTGATGCGCTGTGTCCGC CTGATTTTCCTGCTTTAGGTCGGTTGATGTGCTGTGTCCGC < 41bp 1 0.0933015890093635 1 0.400841385126114 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176686992 chr5:176687001 nonsynonymous SNV 0.996 5 30 hm5C_associated_SNPs_22786 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr5:176686980-176687040
64251 chr19 58772931 58772931 1 + G C GBM 58772944 + 58772924 58772964 41 AGAAGTGGCCCTGGAGAGACCCCCTTCAGATGTGAGGAACG AGAAGTGCCCCTGGAGAGACCCCCTTCAGATGTGAGGAACG < 41bp 1 0.196389095505007 1 0.164288461208344 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58772944 chr19:58772931 nonsynonymous SNV 0.000 1 8 hm5C_associated_SNPs_22788 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58772926-58772942
64251 chr22 38074643 38074643 1 + G A GBM 38074635 + 38074615 38074655 41 AGCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTT AGCAGCGGGAGGCTGTCTTTCCCTTCCAACCTGGAAGTGTT < 41bp 1 0.193626946144624 1 0.271161019802094 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38074635 chr22:38074643 synonymous SNV . 0 29 hm5C_associated_SNPs_22789 0 0 8 DDX55 POSTAR2 ENCODE chr22:38074628-38074661
64251 chr22 38074643 38074643 1 + G A GBM 38074636 + 38074616 38074656 41 GCAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTG GCAGCGGGAGGCTGTCTTTCCCTTCCAACCTGGAAGTGTTG < 41bp 1 0.04896998677076 1 0.360706478357315 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38074636 chr22:38074643 synonymous SNV . 0 28 hm5C_associated_SNPs_22790 0 0 8 DDX55 POSTAR2 ENCODE chr22:38074628-38074661
64251 chr22 38074643 38074643 1 + G A GBM 38074637 + 38074617 38074657 41 CAGCGGGAGGCTGTCTTTCCCTTCCAGCCTGGAAGTGTTGC CAGCGGGAGGCTGTCTTTCCCTTCCAACCTGGAAGTGTTGC < 41bp 1 0.23185215319469 1 0.383107244968414 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38074637 chr22:38074643 synonymous SNV . 0 27 hm5C_associated_SNPs_22791 0 0 8 DDX55 POSTAR2 ENCODE chr22:38074628-38074661
64251 chr9 123898173 123898173 1 + A G GBM 123898159 + 123898139 123898179 41 TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAAGCTGAG TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAGGCTGAG < 41bp 1 0.67211634832243 1 0.422617703676224 experiment 0.655767303355139 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898159 chr9:123898173 synonymous SNV . 0 35 hm5C_associated_SNPs_22793 0 0 8 BUD13 POSTAR2 ENCODE chr9:123898137-123898180
64251 chr2 54856364 54856364 1 + T G GBM 54856361 + 54856341 54856381 41 CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACA CAGTGGCCACTTTGAGCAGGCCAGCAAGGAAGGCGAAGACA < 41bp 1 0.0722003291608967 1 0.0909414291381836 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856361 chr2:54856364 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_22794 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856364 54856364 1 + T G GBM 54856362 + 54856342 54856382 41 AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACAT AGTGGCCACTTTGAGCAGGCCAGCAAGGAAGGCGAAGACAT < 41bp 1 0.611058575818317 1 0.193570822477341 experiment 0.777882848363366 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856362 chr2:54856364 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_22795 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856364 54856364 1 + T G GBM 54856365 + 54856345 54856385 41 GGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACATGAT GGCCACTTTGAGCAGGCCAGCAAGGAAGGCGAAGACATGAT < 41bp 1 0.491526868227003 1 0.61268675327301 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856365 chr2:54856364 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_22796 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr3 101520152 101520152 1 + G A GBM 101520149 + 101520129 101520169 41 GTTTGTTTCCTCCCAGGTGACAGGAATTAGCCGAAATCCCT GTTTGTTTCCTCCCAGGTGACAGAAATTAGCCGAAATCCCT < 41bp 1 0.695670853874024 1 0.659478306770325 experiment 0.608658292251952 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101520149 chr3:101520152 nonsynonymous SNV 0.418 0 24 hm5C_associated_SNPs_22797 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr3:101520133-101520172
64251 chr5 149755836 149755836 1 + C T GBM 149755829 + 149755809 149755849 41 CCAGAGACCAGCAGAGGATTCTTCAAGCAGTGAGGAATCAG CCAGAGACCAGCAGAGGATTCTTCAAGTAGTGAGGAATCAG < 41bp 1 0.340960153440196 1 0.245932757854462 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755829 chr5:149755836 synonymous SNV . 0 28 hm5C_associated_SNPs_22799 0 0 13 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:149755819-149755836
64251 chr5 149755836 149755836 1 + C T GBM 149755847 + 149755827 149755867 41 TTCTTCAAGCAGTGAGGAATCAGATAGTGAGGAAGAGAAGA TTCTTCAAGTAGTGAGGAATCAGATAGTGAGGAAGAGAAGA < 41bp 1 0.345270904979112 1 0.473303407430649 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149755847 chr5:149755836 synonymous SNV . 0 10 hm5C_associated_SNPs_22800 0 0 13 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:149755819-149755836
64251 chr17 41585024 41585024 1 + C A GBM 41585007 + 41584987 41585027 41 GATCATCATGTTGGACGAGGCACATGAGAGGACAATTCACA GATCATCATGTTGGACGAGGCACATGAGAGGACAATTAACA < 41bp 1 0.279566889452708 1 0.197767227888107 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585007 chr17:41585024 nonsynonymous SNV 0.996 1 38 hm5C_associated_SNPs_22801 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41584987-41585042
64251 chr19 18232701 18232701 1 + G C GBM 18232699 + 18232679 18232719 41 TAGTCCTCGGAATTTCTCGGCTGCCTCTGCCCTAAATTTCC TAGTCCTCGGAATTTCTCGGCTCCCTCTGCCCTAAATTTCC < 41bp 1 0.057857357547356 1 0.138559341430664 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST3 ENSG00000099308 CDS Human protein_coding chr19:18232699 chr19:18232701 nonsynonymous SNV 0.184 0 23 hm5C_associated_SNPs_22802 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:18232698-18232725
64251 chr11 118950008 118950008 1 + C A GBM 118949993 + 118949973 118950013 41 ACCCGTATCCGCCAGGAGATCCAAGAGCTCAAGGCCAGGTA ACCCGTATCCGCCAGGAGATCCAAGAGCTCAAGGCAAGGTA < 41bp 1 0.420285664660665 1 0.323863983154297 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS11 ENSG00000160695 CDS Human protein_coding chr11:118949993 chr11:118950008 synonymous SNV . 0 36 hm5C_associated_SNPs_22803 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118949985-118950089
64251 chr19 34292103 34292103 1 + C T GBM 34292109 + 34292089 34292129 41 CCGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCCTGGCTG CCGGCTGTCTCTCATCCGGTCGCCTGTGTCTCCCCTGGCTG < 41bp 1 0.590769574764334 1 0.0612784922122955 experiment 0.818460850471331 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34292109 chr19:34292103 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_22804 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34292079-34292106
64251 chr16 30976386 30976386 1 + T C GBM 30976366 + 30976346 30976386 41 CTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGT CTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGC < 41bp 1 0.635714683451509 1 0.747687339782715 experiment 0.728570633096981 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976366 chr16:30976386 synonymous SNV . 0 41 hm5C_associated_SNPs_22806 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr16:30976385-30976386
64251 chr16 30976386 30976386 1 + T C GBM 30976367 + 30976347 30976387 41 TGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGTG TGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGCG < 41bp 1 0.471893189890865 1 0.927175760269165 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976367 chr16:30976386 synonymous SNV . 0 40 hm5C_associated_SNPs_22807 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr16:30976385-30976386
64251 chr19 50906832 50906832 1 + T C GBM 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTACCTCACCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.0779431883126172 1 0.150748312473297 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906832 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_22808 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr19 50906832 50906832 1 + T C GBM 50906851 + 50906831 50906871 41 ATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT ACCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT < 41bp 1 0.685862276313499 1 0.889750182628632 experiment 0.628275447373001 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906851 chr19:50906832 nonsynonymous SNV 0.999 1 2 hm5C_associated_SNPs_22809 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr5 10387160 10387160 1 + C G GBM 10387150 + 10387130 10387170 41 CTGGCTCCGTGAGCTCACTACTGACGCTGCCATTAGATATG CTGGCTCCGTGAGCTCACTACTGACGCTGCGATTAGATATG < 41bp 1 0.249733280473604 1 0.116332441568375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10387150 chr5:10387160 nonsynonymous SNV 0.998 4 31 hm5C_associated_SNPs_22810 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10387142-10387165
64251 chr14 104135871 104135871 1 + C A GBM 104135852 + 104135832 104135872 41 GTGTTTTTCCATTTAGGGATCAGAATAAATACAAAGATGCA GTGTTTTTCCATTTAGGGATCAGAATAAATACAAAGATGAA < 41bp 1 0.254027273343639 1 0.620356917381287 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104135852 chr14:104135871 nonsynonymous SNV 0.985 5 40 hm5C_associated_SNPs_22811 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:104135845-104135886
64251 chr1 27269376 27269376 1 + C A GBM 27269371 + 27269351 27269391 41 GCCCTATGCAGCTGGCGGTCCCTTTCTGTGTGAACTTCCGG GCCCTATGCAGCTGGCGGTCCCTTTATGTGTGAACTTCCGG < 41bp 1 0.0159399601073785 1 0.0124955475330353 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUDC ENSG00000090273 CDS Human protein_coding chr1:27269371 chr1:27269376 nonsynonymous SNV 0.271 1 26 hm5C_associated_SNPs_22814 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:27269360-27269380
64251 chr12 53412635 53412635 1 + G T GBM 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGACGATGTGTATAGGGCGCCTCCAATTTACCGTTCCA < 41bp 1 0.378001948952907 1 0.0358216762542725 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412635 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_22817 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:53412616-53412655
64251 chr12 53412635 53412635 1 + G T GBM 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGTGTATAGGGCGCCTCCAATTTACCGTTCCATC < 41bp 1 0.0453645548221381 1 0.03049236536026 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412635 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_22818 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:53412616-53412655
64251 chr15 39876521 39876521 1 + G T GBM 39876541 + 39876521 39876561 41 GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG TGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG < 41bp 1 0.153948090061367 1 0.261841237545013 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876541 chr15:39876521 nonsynonymous SNV 0.996 1 1 hm5C_associated_SNPs_22819 0 0 2 BUD13 POSTAR2 ENCODE chr15:39876508-39876550
64251 chrX 129149570 129149570 1 + G T GBM 129149555 + 129149535 129149575 41 GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGTTGGGG < 41bp 1 0.153697157630384 1 0.0937884747982025 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149555 chrX:129149570 nonsynonymous SNV 0.518 1 36 hm5C_associated_SNPs_22820 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:129149567-129149603
64251 chr2 113325658 113325658 1 + C T GBM 113325644 + 113325624 113325664 41 ATTGTTCCTTTTTACCACTCCTTGTAGACTGGTACGGCCTG ATTGTTCCTTTTTACCACTCCTTGTAGACTGGTATGGCCTG < 41bp 1 0.196377435822389 1 0.258165597915649 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113325644 chr2:113325658 nonsynonymous SNV 0.977 4 35 hm5C_associated_SNPs_22821 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:113325641-113325667
64251 chr2 203421049 203421049 1 + T C GBM 203421065 + 203421045 203421085 41 GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA GTCTCGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA < 41bp 1 0.317062487566272 1 0.437239944934845 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203421065 chr2:203421049 synonymous SNV . 0 5 hm5C_associated_SNPs_22822 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:203421032-203421052
64251 chr6 44107303 44107303 1 + C T GBM 44107298 + 44107278 44107318 41 TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG TGCTGGTGGTTGTGGGCGTCCTCTCTGTAGGCATCGTGCTG < 41bp 1 0.414153490942273 1 0.197348058223724 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107298 chr6:44107303 synonymous SNV . 0 26 hm5C_associated_SNPs_22823 0 0 2 PPIG POSTAR2 ENCODE chr6:44107278-44107303
64251 chr6 44107303 44107303 1 + C T GBM 44107300 + 44107280 44107320 41 CTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTGCC CTGGTGGTTGTGGGCGTCCTCTCTGTAGGCATCGTGCTGCC < 41bp 1 0.794153249011225 1 0.536719918251038 experiment 0.411693501977551 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107300 chr6:44107303 synonymous SNV . 0 24 hm5C_associated_SNPs_22824 0 0 2 PPIG POSTAR2 ENCODE chr6:44107278-44107303
64251 chr19 41128384 41128384 1 + G A GBM 41128394 + 41128374 41128414 41 CCCCTGCCCCGCCGACCCAGCACACCTAGGCAGGGCCCTGT CCCCTGCCCCACCGACCCAGCACACCTAGGCAGGGCCCTGT < 41bp 1 0.18641428568474 1 0.0317881405353546 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41128394 chr19:41128384 nonsynonymous SNV 0.052 2 11 hm5C_associated_SNPs_22825 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:41128347-41128387
64251 chr16 31091658 31091658 1 + G A GBM 31091674 + 31091654 31091694 41 AACCGCATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGA AACCACATGGCCCTGAAGGACCACCAGAGGCTGCACTCAGA < 41bp 1 0.0660758250376503 1 0.0276893675327301 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091674 chr16:31091658 nonsynonymous SNV 0.989 0 5 hm5C_associated_SNPs_22826 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr16:31091644-31091668
64251 chr6 33633622 33633622 1 + C T GBM 33633637 + 33633617 33633657 41 TCATCCAGCTGCTGGAAGACCTGGTGTTCTTTGTCAGCGAT TCATCTAGCTGCTGGAAGACCTGGTGTTCTTTGTCAGCGAT < 41bp 1 0.495210378049566 1 0.19605627655983 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33633637 chr6:33633622 stopgain 1.000 1 6 hm5C_associated_SNPs_22828 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33633610-33633632
64251 chr22 44372062 44372062 1 + C T GBM 44372056 + 44372036 44372076 41 CGGACATTCACTGAAATCATCTCTTTCGGTAACGGTTTCTC CGGACATTCACTGAAATCATCTCTTTTGGTAACGGTTTCTC < 41bp 1 0.157399290203097 1 0.244761615991592 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44372056 chr22:44372062 nonsynonymous SNV 0.993 2 27 hm5C_associated_SNPs_22829 0 0 1 PRPF8 POSTAR2 ENCODE chr22:44372050-44372099
64251 chr22 44372062 44372062 1 + C T GBM 44372058 + 44372038 44372078 41 GACATTCACTGAAATCATCTCTTTCGGTAACGGTTTCTCTT GACATTCACTGAAATCATCTCTTTTGGTAACGGTTTCTCTT < 41bp 1 0.0540644895666157 1 0.145290940999985 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44372058 chr22:44372062 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_22830 0 0 1 PRPF8 POSTAR2 ENCODE chr22:44372050-44372099
64251 chr17 62223710 62223710 1 + G C GBM 62223702 + 62223682 62223722 41 TGTGTGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGA TGTGTGTCGTTGGCGACGCGCTGTCTTTCAGCCCCCGCCGA < 41bp 1 0.292321450422004 1 0.0620604753494263 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223702 chr17:62223710 . . 0 29 hm5C_associated_SNPs_22831 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223706 + 62223686 62223726 41 TGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTT TGTCGTTGGCGACGCGCTGTCTTTCAGCCCCCGCCGAGCTT < 41bp 1 0.114602585645127 1 0.0474865734577179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223706 chr17:62223710 . . 0 25 hm5C_associated_SNPs_22832 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223713 + 62223693 62223733 41 GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG GGCGACGCGCTGTCTTTCAGCCCCCGCCGAGCTTCCTCGTG < 41bp 1 0.146454043582282 1 0.151125758886337 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223713 chr17:62223710 . . 0 18 hm5C_associated_SNPs_22833 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223714 + 62223694 62223734 41 GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG GCGACGCGCTGTCTTTCAGCCCCCGCCGAGCTTCCTCGTGG < 41bp 1 0.326526105825973 1 0.105209171772003 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223714 chr17:62223710 . . 0 17 hm5C_associated_SNPs_22834 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223715 + 62223695 62223735 41 CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC CGACGCGCTGTCTTTCAGCCCCCGCCGAGCTTCCTCGTGGC < 41bp 1 0.187514191396762 1 0.0878905951976776 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223715 chr17:62223710 . . 0 16 hm5C_associated_SNPs_22835 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223716 + 62223696 62223736 41 GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG GACGCGCTGTCTTTCAGCCCCCGCCGAGCTTCCTCGTGGCG < 41bp 1 0.121298829297138 1 0.0980886816978455 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223716 chr17:62223710 . . 0 15 hm5C_associated_SNPs_22836 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CGCTGTCTTTCAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG < 41bp 1 0.567608956211679 1 0.464351028203964 experiment 0.864782087576643 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223710 . . 0 11 hm5C_associated_SNPs_22837 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223727 + 62223707 62223747 41 TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA TTTCAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA < 41bp 1 0.25685546917995 1 0.406045585870743 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223727 chr17:62223710 . . 0 4 hm5C_associated_SNPs_22838 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr17 62223710 62223710 1 + G C GBM 62223728 + 62223708 62223748 41 TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT TTCAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT < 41bp 1 0.621759459507057 1 0.288967043161392 experiment 0.756481080985887 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223728 chr17:62223710 . . 0 3 hm5C_associated_SNPs_22839 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:62223647-62223717
64251 chr5 912022 912022 1 + G A GBM 912029 + 912009 912049 41 CGTGGCCTTCGTGGACAGGGCTGACATCAAGCAGTACATTG CGTGGCCTTCGTGAACAGGGCTGACATCAAGCAGTACATTG < 41bp 1 0.315535807125981 1 0.0256483554840088 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:912029 chr5:912022 nonsynonymous SNV 0.972 5 14 hm5C_associated_SNPs_22840 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:911991-912031
64251 chr19 58290976 58290976 1 + G A GBM 58290970 + 58290950 58290990 41 TTATTATACATCTGAGAGTTCACACTGGAGAAAGGCCTTAT TTATTATACATCTGAGAGTTCACACTAGAGAAAGGCCTTAT < 41bp 1 0.220131407019482 1 0.0732112228870392 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58290970 chr19:58290976 nonsynonymous SNV 0.971 3 27 hm5C_associated_SNPs_22841 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:58290958-58290992
64251 chr19 58290965 58290965 1 + G A GBM 58290970 + 58290950 58290990 41 TTATTATACATCTGAGAGTTCACACTGGAGAAAGGCCTTAT TTATTATACATCTGAAAGTTCACACTGGAGAAAGGCCTTAT < 41bp 1 0.210029644836189 1 0.0649387836456299 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58290970 chr19:58290965 nonsynonymous SNV 0.789 2 16 hm5C_associated_SNPs_22842 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:58290939-58290975
64251 chr6 111288927 111288927 1 + T C GBM 111288931 + 111288911 111288951 41 AAATAGAAGATTCTGGTCCTCTTATTGATATACCTTCTGAG AAATAGAAGATTCTGGCCCTCTTATTGATATACCTTCTGAG < 41bp 1 0.16661208120104 1 0.104578346014023 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288931 chr6:111288927 synonymous SNV . 0 17 hm5C_associated_SNPs_22843 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:111288920-111288940
64251 chr19 55817715 55817715 1 + C A GBM 55817719 + 55817699 55817739 41 TCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCT TCCAAAAGCCCGTCCGATTCCAGGTGGACATCAGCTCCTCT < 41bp 1 0.754035681619991 1 0.893652200698853 experiment 0.491928636760019 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817719 chr19:55817715 synonymous SNV . 0 17 hm5C_associated_SNPs_22844 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr15 74917256 74917256 1 + G A GBM 74917240 + 74917220 74917260 41 TCTGTTTCCTTCCCGGGTACCAGAGGGAAGTCTCAGGTTGC TCTGTTTCCTTCCCGGGTACCAGAGGGAAGTCTCAGATTGC < 41bp 1 0.315960124876826 1 0.85140073299408 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74917240 chr15:74917256 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_22845 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:74917253-74917274
64251 chr11 67378032 67378032 1 + G A GBM 67378025 + 67378005 67378045 41 AAGCCCCGCCTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA AAGCCCCGCCTGAAGCCCCCCTTCCCCACAGACGTGGGTAA < 41bp 1 0.108423700232786 1 0.339995443820953 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378025 chr11:67378032 nonsynonymous SNV 0.145 5 28 hm5C_associated_SNPs_22846 0 0 3 DDX24 POSTAR2 ENCODE chr11:67377991-67378040
64251 chr15 57526304 57526304 1 + C A GBM 57526295 + 57526275 57526315 41 AGGTGATGCACTTGGAAAGGCTTTGGCATCTGTGAGTATTG AGGTGATGCACTTGGAAAGGCTTTGGCATATGTGAGTATTG < 41bp 1 0.120473619915855 1 0.0500891804695129 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57526295 chr15:57526304 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_22847 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:57526268-57526304
64251 chr19 50027849 50027849 1 + G A GBM 50027862 + 50027842 50027882 41 ACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG ACCCTCCAGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG < 41bp 1 0.475641410348139 1 0.746031582355499 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027862 chr19:50027849 synonymous SNV . 0 8 hm5C_associated_SNPs_22848 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50027819-50027859
64251 chr5 54640967 54640967 1 + C T GBM 54640986 + 54640966 54641006 41 TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC TTGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC < 41bp 1 0.497280450673027 1 0.641986668109894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640986 chr5:54640967 stopgain 1.000 1 2 hm5C_associated_SNPs_22850 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54640946-54640980
64251 chr5 36985783 36985783 1 + G A GBM 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCGACATCAAGGGGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.110981464000963 1 0.0358218848705292 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985783 nonsynonymous SNV 0.992 3 13 hm5C_associated_SNPs_22851 1 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:36985753-36985813
64251 chr20 37076736 37076736 1 + C T GBM 37076732 + 37076712 37076752 41 TTTGCTCTTTTCTGCGCCTGCATTCGTAAGTGATCACGGGC TTTGCTCTTTTCTGCGCCTGCATTTGTAAGTGATCACGGGC < 41bp 1 0.0588231050706515 1 0.0421150326728821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA71E ENSG00000174365 ncRNA_exonic Human processed_transcript chr20:37076732 chr20:37076736 . . 0 25 hm5C_associated_SNPs_22852 0 0 4 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr20:37076720-37076740
64251 chr1 44069411 44069411 1 + C T GBM 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGTGCGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.393822045927371 1 0.06315878033638 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069411 nonsynonymous SNV 0.525 0 14 hm5C_associated_SNPs_22853 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr1 206902132 206902132 1 + G A GBM 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGAATCGTGGATGTGTACGAGAATCT < 41bp 1 0.602220038091721 1 0.338716685771942 experiment 0.795559923816557 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902132 synonymous SNV . 0 18 hm5C_associated_SNPs_22854 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:206902097-206902132
64251 chr9 95869973 95869973 1 + C T GBM 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CTGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC < 41bp 1 0.0542075868233845 1 0.0534083247184753 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869973 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_22855 0 0 2 DDX3X POSTAR2 ENCODE chr9:95869959-95869999
64251 chr17 79668136 79668136 1 + C T GBM 79668148 + 79668128 79668168 41 CTACATCGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC CTACATCGTGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC < 41bp 1 0.223038261872852 1 0.286565184593201 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79668148 chr17:79668136 nonsynonymous SNV 0.258 0 9 hm5C_associated_SNPs_22856 0 0 3 DDX24 POSTAR2 ENCODE chr17:79668104-79668161
64251 chr12 95868051 95868051 1 + G T GBM 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACGGCTGATGAAGCAGCCAAGAAAAAAAGACGAAAGA < 41bp 1 0.279349601110993 1 0.508952021598816 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868051 nonsynonymous SNV 0.980 2 13 hm5C_associated_SNPs_22857 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr14 23070604 23070604 1 + C T GBM 23070600 + 23070580 23070620 41 GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCC GCTGGCTGAGTAGCTGGCTGCCCATGTGGCGCCCCACTTCC < 41bp 1 0.392851597541633 1 0.152500182390213 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070600 chr14:23070604 nonsynonymous SNV 0.884 2 25 hm5C_associated_SNPs_22859 0 0 6 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chr1 183083807 183083807 1 + G A GBM 183083799 + 183083779 183083819 41 TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAA TGTGAGAGGTGCCGAGAGAACTTCTTCCACCTTGGCAACAA < 41bp 1 0.418565000395794 1 0.160152912139893 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083799 chr1:183083807 nonsynonymous SNV 0.993 4 29 hm5C_associated_SNPs_22860 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:183083765-183083814
64251 chr1 206902127 206902127 1 + G A GBM 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCATACGGATCGTGGATGTGTACGAGAATCT < 41bp 1 0.418005058729851 1 0.219996631145477 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902127 nonsynonymous SNV 0.670 2 13 hm5C_associated_SNPs_22861 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:206902097-206902132
64251 chr19 39979214 39979214 1 + G A GBM 39979223 + 39979203 39979243 41 ACGTGCGAACCGTGCTGGAGCACTATGCCCTGGAGGATGAC ACGTGCGAACCATGCTGGAGCACTATGCCCTGGAGGATGAC < 41bp 1 0.391509701725005 1 0.0630949437618256 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39979223 chr19:39979214 nonsynonymous SNV 0.946 3 12 hm5C_associated_SNPs_22864 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39979189-39979225
64251 chr17 1634184 1634184 1 + G A GBM 1634199 + 1634179 1634219 41 CGCCCGCCTGTATGGGGAGCCTGTCCTCACCTACCAGTACC CGCCCACCTGTATGGGGAGCCTGTCCTCACCTACCAGTACC < 41bp 1 0.100093238258645 1 0.0833939909934998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR81 ENSG00000167716 CDS Human protein_coding chr17:1634199 chr17:1634184 nonsynonymous SNV 0.693 0 6 hm5C_associated_SNPs_22865 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:1634166-1634187
64251 chr19 42839498 42839498 1 + C T GBM 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTCGTCCTATACAACTTCTCTGCCAACACCTGGGAGTCTT < 41bp 1 0.250440772014992 1 0.340606391429901 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839498 synonymous SNV . 0 22 hm5C_associated_SNPs_22867 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr19:42839480-42839500
64251 chr12 31242059 31242059 1 + C T GBM 31242078 + 31242058 31242098 41 TCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCC TTGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAACAGTAGCC < 41bp 1 0.449885330038308 1 0.288096606731415 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242078 chr12:31242059 nonsynonymous SNV 0.001 4 2 hm5C_associated_SNPs_22868 0 0 20 FMR1 POSTAR2 GSE39682,GSM977616 chr12:31242040-31242060
64251 chr15 40259731 40259731 1 + C T GBM 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCCATCCCTGTGCATCAGTTTCGCAGGTACACAGCT < 41bp 1 0.161730657738214 1 0.0911943018436432 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259731 nonsynonymous SNV 0.895 4 24 hm5C_associated_SNPs_22869 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40259700-40259740
64251 chr5 177019589 177019589 1 + G A GBM 177019580 + 177019560 177019600 41 CCCTGCTTCCCTCAAGGAAACTACCGGACGCAGCTGTATGA CCCTGCTTCCCTCAAGGAAACTACCGGACACAGCTGTATGA < 41bp 1 0.363006117178649 1 0.0874879062175751 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019580 chr5:177019589 synonymous SNV . 0 30 hm5C_associated_SNPs_22870 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 177019589 177019589 1 + G A GBM 177019588 + 177019568 177019608 41 CCCTCAAGGAAACTACCGGACGCAGCTGTATGACAAGCAGC CCCTCAAGGAAACTACCGGACACAGCTGTATGACAAGCAGC < 41bp 1 0.525360589937378 1 0.137803882360458 experiment 0.949278820125244 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019588 chr5:177019589 synonymous SNV . 0 22 hm5C_associated_SNPs_22871 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 177019589 177019589 1 + G A GBM 177019593 + 177019573 177019613 41 AAGGAAACTACCGGACGCAGCTGTATGACAAGCAGCGGGAG AAGGAAACTACCGGACACAGCTGTATGACAAGCAGCGGGAG < 41bp 1 0.758336373305663 1 0.598385095596313 experiment 0.483327253388673 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019593 chr5:177019589 synonymous SNV . 0 17 hm5C_associated_SNPs_22872 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 177019589 177019589 1 + G A GBM 177019601 + 177019581 177019621 41 TACCGGACGCAGCTGTATGACAAGCAGCGGGAGGAGTACCA TACCGGACACAGCTGTATGACAAGCAGCGGGAGGAGTACCA < 41bp 1 0.514517024476252 1 0.495074301958084 experiment 0.970965951047496 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019601 chr5:177019589 synonymous SNV . 0 9 hm5C_associated_SNPs_22873 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 131940547 131940547 1 + A G GBM 131940539 + 131940519 131940559 41 ATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACAT ATCGTAAGCTTATACAGGACCAGCAGGAGCAGATTCAACAT < 41bp 1 0.696748563879538 1 0.179740399122238 experiment 0.606502872240923 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131940539 chr5:131940547 synonymous SNV . 0 29 hm5C_associated_SNPs_22874 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr5:131940526-131940564
64251 chr15 76630252 76630252 1 + G T GBM 76630260 + 76630240 76630280 41 GTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGACGGGA GTACCTGGACGATACGTGCACGTGCTTCGTGAGAGACGGGA < 41bp 1 0.26600978264759 1 0.252146333456039 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630260 chr15:76630252 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_22875 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630220-76630260
64251 chr1 43917153 43917153 1 - A G GBM 43917159 - 43917139 43917179 41 AGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTT AGCCCAGCAGCCCCGGAGAGCTGAATCTCCCCTATCTGTTT < 41bp 1 0.611527942640379 1 0.325560688972473 experiment 0.776944114719241 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HYI ENSG00000178922 CDS Human protein_coding chr1:43917159 chr1:43917153 nonsynonymous SNV 0.991 2 27 hm5C_associated_SNPs_22876 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:43917132-43917155
64251 chr17 47004377 47004377 1 + C T GBM 47004386 + 47004366 47004406 41 CCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTG CCCTCTTGATGTGCCTGGGACTGATACGTCAGAAAGTGCTG < 41bp 1 0.244763351120992 1 0.131470680236816 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004386 chr17:47004377 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_22878 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:47004360-47004380
64251 chr17 33932748 33932748 1 + C A GBM 33932759 + 33932739 33932779 41 CGTAGTGAACTGTATGCAGACTGACAATCTGGAACTAAAGA CGTAGTGAAATGTATGCAGACTGACAATCTGGAACTAAAGA < 41bp 1 0.124918521308821 1 0.0213044285774231 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33932759 chr17:33932748 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_22879 0 0 11 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:33932727-33932749
64251 chr19 4793228 4793228 1 + C T GBM 4793215 + 4793195 4793235 41 CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGTCTGGGCA < 41bp 1 0.0908288453115424 1 0.120585471391678 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793215 chr19:4793228 synonymous SNV . 0 34 hm5C_associated_SNPs_22880 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4793141-4793239
64251 chr17 47004360 47004360 1 + A G GBM 47004350 + 47004330 47004370 41 CTTTTGGAGAGAAGCGGGGCCACTTTGACTACCAGTCCCTC CTTTTGGAGAGAAGCGGGGCCACTTTGACTGCCAGTCCCTC < 41bp 1 0.209847595799193 1 0.0727498531341553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004350 chr17:47004360 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_22881 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:47004343-47004373
64251 chr1 207498012 207498012 1 + G A GBM 207498032 + 207498012 207498052 41 GTTACAGAAGAGAACCTTCTCTATCACCAAAACTAACTTGC ATTACAGAAGAGAACCTTCTCTATCACCAAAACTAACTTGC < 41bp 1 0.22863351634413 1 0.0970371961593628 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207498032 chr1:207498012 nonsynonymous SNV 0.004 4 1 hm5C_associated_SNPs_22883 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:207498000-207498020
64251 chr6 33633655 33633655 1 + G A GBM 33633637 + 33633617 33633657 41 TCATCCAGCTGCTGGAAGACCTGGTGTTCTTTGTCAGCGAT TCATCCAGCTGCTGGAAGACCTGGTGTTCTTTGTCAGCAAT < 41bp 1 0.462018296269442 1 0.153171181678772 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33633637 chr6:33633655 nonsynonymous SNV 0.978 4 39 hm5C_associated_SNPs_22884 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33633644-33633664
64251 chr3 184039151 184039151 1 + C T GBM 184039162 + 184039142 184039182 41 CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCA CCCAGCCTTTGTCGCCTTCTCCGACCCCATCACCATCCCCA < 41bp 1 0.260048351196711 1 0.331364512443542 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039162 chr3:184039151 nonsynonymous SNV 0.995 3 10 hm5C_associated_SNPs_22885 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr3 184039151 184039151 1 + C T GBM 184039163 + 184039143 184039183 41 CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCAG CCAGCCTTTGTCGCCTTCTCCGACCCCATCACCATCCCCAG < 41bp 1 0.411987473623114 1 0.801078200340271 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039163 chr3:184039151 nonsynonymous SNV 0.995 3 9 hm5C_associated_SNPs_22886 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr2 228398390 228398390 1 + G T GBM 228398373 + 228398353 228398393 41 TTCCCAGAGTCATCAAACAGCATCAGCTGTTAGTAAAGTTT TTCCCAGAGTCATCAAACAGCATCAGCTGTTAGTAAATTTT < 41bp 1 0.348634423540948 1 0.0653312206268311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228398373 chr2:228398390 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_22887 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:228398333-228398448
64251 chr3 17056231 17056231 1 + G A GBM 17056251 + 17056231 17056271 41 GCCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG ACCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG < 41bp 1 0.512800315160789 1 0.161517381668091 experiment 0.974399369678421 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056251 chr3:17056231 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_22888 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:17056211-17056243
64251 chr8 64099225 64099225 1 + G A GBM 64099222 + 64099202 64099242 41 TTTGAGCAGCAGTGGTATGACTAGCATTGCAACCAATAGTG TTTGAGCAGCAGTGGTATGACTAACATTGCAACCAATAGTG < 41bp 1 0.459964131106833 1 0.0698038339614868 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64099222 chr8:64099225 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_22889 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:64099188-64099226
64251 chr20 3802814 3802814 1 + A G GBM 3802800 + 3802780 3802820 41 CTCATTCACACCTTGAGGGCCCCGAATACTGAGGACACGGG CTCATTCACACCTTGAGGGCCCCGAATACTGAGGGCACGGG < 41bp 1 0.423557904359947 1 0.0489690005779266 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3802800 chr20:3802814 nonsynonymous SNV 0.039 0 35 hm5C_associated_SNPs_22890 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:3802803-3802826
64251 chr2 235949756 235949756 1 + C T GBM 235949741 + 235949721 235949761 41 ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAAC ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACTGGAAC < 41bp 1 0.152863443566091 1 0.128964126110077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949741 chr2:235949756 nonsynonymous SNV 0.981 3 36 hm5C_associated_SNPs_22893 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr2 235949756 235949756 1 + C T GBM 235949744 + 235949724 235949764 41 TCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA TCCCCTCCTCCTATGTGCAGCCCTTGAACTACTGGAACTCA < 41bp 1 0.0173740505257064 1 0.0715039968490601 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949744 chr2:235949756 nonsynonymous SNV 0.981 3 33 hm5C_associated_SNPs_22894 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr2 235949756 235949756 1 + C T GBM 235949745 + 235949725 235949765 41 CCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA CCCCTCCTCCTATGTGCAGCCCTTGAACTACTGGAACTCAA < 41bp 1 0.0246509480102623 1 0.106940418481827 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949745 chr2:235949756 nonsynonymous SNV 0.981 3 32 hm5C_associated_SNPs_22895 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr1 224553692 224553692 1 + C T GBM 224553676 + 224553656 224553696 41 CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGGTG CTTCTCAACTTACCTGTTGCCACTTGGAATATATATTGGTG < 41bp 1 0.264947798822209 1 0.381448715925217 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNIH4 ENSG00000143771 CDS Human protein_coding chr1:224553676 chr1:224553692 stopgain 0.999 2 37 hm5C_associated_SNPs_22897 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:224553645-224553693
64251 chr9 97767852 97767852 1 + G T GBM 97767847 + 97767827 97767867 41 ACGAAATGGATTGGAGTGAACCGGAGACCCCGAAAACGGAA ACGAAATGGATTGGAGTGAACCGGATACCCCGAAAACGGAA < 41bp 1 0.625180918517232 1 0.532237946987152 experiment 0.749638162965535 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97767847 chr9:97767852 nonsynonymous SNV 0.894 3 26 hm5C_associated_SNPs_22898 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:97767835-97767858
64251 chrX 107814694 107814694 1 + C T GBM 107814691 + 107814671 107814711 41 GTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATT GTTTTCCTGGTTTACAGGGTCCTTCAGTAAGTTATAAAATT < 41bp 1 0.00400761248632255 1 0.0218939483165741 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107814691 chrX:107814694 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_22899 0 0 6 BUD13 POSTAR2 ENCODE chrX:107814650-107814698
64251 chr11 61584149 61584149 1 + G A GBM 61584155 + 61584135 61584175 41 CTCGCACCCTGAGCGCTGGGCCACCTCGTCCCAGGTGAAGT CTCGCACCCTGAGCACTGGGCCACCTCGTCCCAGGTGAAGT < 41bp 1 0.031534014335105 1 0.0493794977664948 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584155 chr11:61584149 nonsynonymous SNV 0.819 3 15 hm5C_associated_SNPs_22900 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584156 + 61584136 61584176 41 TCGCACCCTGAGCGCTGGGCCACCTCGTCCCAGGTGAAGTA TCGCACCCTGAGCACTGGGCCACCTCGTCCCAGGTGAAGTA < 41bp 1 0.165437087141444 1 0.059850811958313 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584156 chr11:61584149 nonsynonymous SNV 0.819 3 14 hm5C_associated_SNPs_22901 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584158 + 61584138 61584178 41 GCACCCTGAGCGCTGGGCCACCTCGTCCCAGGTGAAGTAGC GCACCCTGAGCACTGGGCCACCTCGTCCCAGGTGAAGTAGC < 41bp 1 0.0734566750862709 1 0.0579234659671783 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584158 chr11:61584149 nonsynonymous SNV 0.819 3 12 hm5C_associated_SNPs_22902 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584159 + 61584139 61584179 41 CACCCTGAGCGCTGGGCCACCTCGTCCCAGGTGAAGTAGCG CACCCTGAGCACTGGGCCACCTCGTCCCAGGTGAAGTAGCG < 41bp 1 0.379943132477334 1 0.226368874311447 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584159 chr11:61584149 nonsynonymous SNV 0.819 3 11 hm5C_associated_SNPs_22903 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584161 + 61584141 61584181 41 CCCTGAGCGCTGGGCCACCTCGTCCCAGGTGAAGTAGCGCG CCCTGAGCACTGGGCCACCTCGTCCCAGGTGAAGTAGCGCG < 41bp 1 0.223173535037796 1 0.445814937353134 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584161 chr11:61584149 nonsynonymous SNV 0.819 3 9 hm5C_associated_SNPs_22904 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584164 + 61584144 61584184 41 TGAGCGCTGGGCCACCTCGTCCCAGGTGAAGTAGCGCGGGG TGAGCACTGGGCCACCTCGTCCCAGGTGAAGTAGCGCGGGG < 41bp 1 0.452046887354591 1 0.78781920671463 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584164 chr11:61584149 nonsynonymous SNV 0.819 3 6 hm5C_associated_SNPs_22905 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr11 61584149 61584149 1 + G A GBM 61584165 + 61584145 61584185 41 GAGCGCTGGGCCACCTCGTCCCAGGTGAAGTAGCGCGGGGT GAGCACTGGGCCACCTCGTCCCAGGTGAAGTAGCGCGGGGT < 41bp 1 0.430428516653429 1 0.817209959030151 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FADS1;FADS2 ENSG00000134824;ENSG00000149485 CDS Human other chr11:61584165 chr11:61584149 nonsynonymous SNV 0.819 3 5 hm5C_associated_SNPs_22906 0 0 2 DHX30 POSTAR2 ENCODE chr11:61584127-61584161
64251 chr15 25222149 25222149 1 + C T GBM 25222166 + 25222146 25222186 41 TGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTGAGGAACC TGTTCGAGGAGTTGGGGGACCATCCCAGCAGGTGAGGAACC < 41bp 1 0.134702079794535 1 0.221936404705048 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25222166 chr15:25222149 synonymous SNV . 0 4 hm5C_associated_SNPs_22908 0 0 3 DDX3X POSTAR2 ENCODE chr15:25222120-25222176
64251 chr15 80450503 80450503 1 + C A GBM 80450510 + 80450490 80450530 41 AACACCAGGATGTCTTCAATCAGGTAGGACATTGTGAAACG AACACCAGGATGTATTCAATCAGGTAGGACATTGTGAAACG < 41bp 1 0.64752128305105 1 0.544570744037628 experiment 0.704957433897901 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAH ENSG00000103876 CDS Human protein_coding chr15:80450510 chr15:80450503 synonymous SNV . 0 14 hm5C_associated_SNPs_22909 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:80450470-80450504
64251 chr14 23237274 23237274 1 + C T GBM 23237294 + 23237274 23237314 41 CGCTGAACTGGGGCTGGGGTCATACACCCCAGTGGGACTGA TGCTGAACTGGGGCTGGGGTCATACACCCCAGTGGGACTGA < 41bp 1 0.236512774286567 1 0.345553457736969 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23237294 chr14:23237274 synonymous SNV . 0 1 hm5C_associated_SNPs_22910 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr14:23237242-23237279
64251 chr5 33455769 33455769 1 + G T GBM 33455756 + 33455736 33455776 41 AGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGACTGGAA AGAAAATCATTAAAGAAAAACAAGCTTTTGAAATACTGGAA < 41bp 1 0.305728720486169 1 0.312661230564117 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33455756 chr5:33455769 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_22912 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:33455716-33455800
64251 chr4 123260537 123260537 1 + C A GBM 123260543 + 123260523 123260563 41 GAGTGGAACAAAGACTTCTGCTAGCAAAACTGGAATACCAG GAGTGGAACAAAGAATTCTGCTAGCAAAACTGGAATACCAG < 41bp 1 0.119484747318636 1 0.168009340763092 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123260543 chr4:123260537 nonsynonymous SNV 0.998 0 15 hm5C_associated_SNPs_22913 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:123260521-123260552
64251 chr7 91735020 91735020 1 + C T GBM 91735017 + 91734997 91735037 41 AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT AATTTTTGGTTCGACGGTGGCATTGAGTCACAGGTTCTGTT < 41bp 1 0.061354559578008 1 0.145340830087662 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91735017 chr7:91735020 stopgain 0.997 0 24 hm5C_associated_SNPs_22915 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:91735000-91735020
64251 chr11 48134396 48134396 1 + G T GBM 48134404 + 48134384 48134424 41 CTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAA CTTTCATAAACATAATGGAACTGGAACACCTCAGGTGGAAA < 41bp 1 0.493805229330742 1 0.35454648733139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48134404 chr11:48134396 nonsynonymous SNV 0.002 0 13 hm5C_associated_SNPs_22916 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:48134363-48134396
64251 chr7 135291554 135291554 1 + C A GBM 135291549 + 135291529 135291569 41 TTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT TTCGTCATGAAACAAGAATCCACATATTGAATCTTCTCATT < 41bp 1 0.252667358592442 1 0.109789729118347 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291549 chr7:135291554 synonymous SNV . 0 26 hm5C_associated_SNPs_22917 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:135291540-135291560
64251 chr14 64989897 64989897 1 + C A GBM 64989887 + 64989867 64989907 41 GTGGTTGAACATATGTCTAGCTGCTTAGATCAAGATATGTT GTGGTTGAACATATGTCTAGCTGCTTAGATAAAGATATGTT < 41bp 1 0.383617187398886 1 0.0924907028675079 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64989887 chr14:64989897 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_22918 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr14:64989873-64989900
64251 chr20 47639675 47639675 1 + C T GBM 47639658 + 47639638 47639678 41 TTGATACAGACCATTGACAACATTGTGTTCTACCCTGCGAC TTGATACAGACCATTGACAACATTGTGTTCTACCCTGTGAC < 41bp 1 0.0893341727698255 1 0.107313334941864 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47639658 chr20:47639675 nonsynonymous SNV 0.415 3 38 hm5C_associated_SNPs_22922 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47639660-47639679
64251 chr19 6374343 6374343 1 + C A GBM 6374323 + 6374303 6374343 41 CCCCGGCCAGACCCTGCTCTCCTCCGTGCACGTGCTGGACC CCCCGGCCAGACCCTGCTCTCCTCCGTGCACGTGCTGGACA < 41bp 1 0.201658861709931 1 0.0887159705162048 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALKBH7 ENSG00000125652 CDS Human protein_coding chr19:6374323 chr19:6374343 nonsynonymous SNV 0.997 4 41 hm5C_associated_SNPs_22923 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6374316-6374346
64251 chr18 56063406 56063406 1 + C T GBM 56063414 + 56063394 56063434 41 TGCAGCTTTAATCGCCTTGACTTACCTCCATATGAAACCTT TGCAGCTTTAATTGCCTTGACTTACCTCCATATGAAACCTT < 41bp 1 0.0389363488262936 1 0.064290463924408 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:56063414 chr18:56063406 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_22924 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:56063398-56063428
64251 chr12 121858093 121858093 1 + G A GBM 121858092 + 121858072 121858112 41 ACAGAAGATGATGATGACGACGATGATGAGGATGATGATGA ACAGAAGATGATGATGACGACAATGATGAGGATGATGATGA < 41bp 1 0.30754225910848 1 0.172055512666702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNF34 ENSG00000170633 CDS Human protein_coding chr12:121858092 chr12:121858093 nonsynonymous SNV 0.044 0 22 hm5C_associated_SNPs_22925 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121858069-121858114
64251 chr19 810782 810782 1 + G A GBM 810787 + 810767 810807 41 AACCACGACCTCGGGGAGAACCACCACCTGCGGGTCTCCTT AACCACGACCTCGGGAAGAACCACCACCTGCGGGTCTCCTT < 41bp 1 0.151729629602782 1 0.188664972782135 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:810787 chr19:810782 nonsynonymous SNV 0.997 1 16 hm5C_associated_SNPs_22926 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:810756-810794
64251 chr7 116339986 116339986 1 + C A GBM 116339981 + 116339961 116340001 41 CACACAAGAATAATCAGGTTCTGTTCCATAAACTCTGGATT CACACAAGAATAATCAGGTTCTGTTACATAAACTCTGGATT < 41bp 1 0.170495796847443 1 0.054120808839798 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MET ENSG00000105976 CDS Human protein_coding chr7:116339981 chr7:116339986 nonsynonymous SNV 0.956 4 26 hm5C_associated_SNPs_22927 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116339920-116340001
64251 chr17 64783079 64783079 1 + C A GBM 64783073 + 64783053 64783093 41 AAAATCCTTGTCCAAGGAGGCTGTTTCTGTCTGCAAAGGAG AAAATCCTTGTCCAAGGAGGCTGTTTATGTCTGCAAAGGAG < 41bp 1 0.0468105131578975 1 0.259233474731445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64783073 chr17:64783079 nonsynonymous SNV 0.970 2 27 hm5C_associated_SNPs_22929 0 0 2 GRWD1 POSTAR2 ENCODE chr17:64783028-64783093
64251 chr6 33380542 33380542 1 + G A GBM 33380523 + 33380503 33380543 41 TTGTGTCTGTCGCTCTGAGACTGTGGTCCCTGGGAACCGGC TTGTGTCTGTCGCTCTGAGACTGTGGTCCCTGGGAACCGAC < 41bp 1 0.433201720632094 1 0.135435968637466 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF1 ENSG00000112511 CDS Human protein_coding chr6:33380523 chr6:33380542 synonymous SNV . 0 40 hm5C_associated_SNPs_22930 0 0 3 GRWD1 POSTAR2 ENCODE chr6:33380474-33380561
64251 chr7 135258552 135258552 1 + G A GBM 135258571 + 135258551 135258591 41 AGCTGTTGAGCTTCTTCTTGCTGGTAGGTTGACATTTAACT AACTGTTGAGCTTCTTCTTGCTGGTAGGTTGACATTTAACT < 41bp 1 0.212807849487171 1 0.118764460086823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135258571 chr7:135258552 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_22931 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:135258521-135258571
64251 chr3 141644464 141644464 1 + G T GBM 141644475 + 141644455 141644495 41 AGATTGATGGATCAGCCAACCTAAAAAGTCAGGATGATCGT AGATTGATGTATCAGCCAACCTAAAAAGTCAGGATGATCGT < 41bp 1 0.695922907730122 1 0.416225969791412 experiment 0.608154184539756 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141644475 chr3:141644464 nonsynonymous SNV 0.385 4 10 hm5C_associated_SNPs_22932 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141644411-141644540
64251 chr1 92769550 92769550 1 + C A GBM 92769553 + 92769533 92769573 41 GGGGAGGTTCATTACACCTGCTCACTACAGTGATGTCGTGG GGGGAGGTTCATTACACATGCTCACTACAGTGATGTCGTGG < 41bp 1 0.256567730941705 1 0.0762902796268463 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769553 chr1:92769550 nonsynonymous SNV 0.996 3 18 hm5C_associated_SNPs_22933 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:92769539-92769572
64251 chr9 95869974 95869974 1 + G A GBM 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCACCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC < 41bp 1 0.0559258095612369 1 0.0723204910755157 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869974 nonsynonymous SNV 0.998 4 3 hm5C_associated_SNPs_22934 0 0 2 DDX3X POSTAR2 ENCODE chr9:95869959-95869999
64251 chr16 67914549 67914549 1 + C T GBM 67914550 + 67914530 67914570 41 CCCCTAGCCGCACTCGTTCCCCTGATGTCATCTCCTCAGCT CCCCTAGCCGCACTCGTTCTCCTGATGTCATCTCCTCAGCT < 41bp 1 0.512467955372668 1 0.471185833215714 experiment 0.975064089254664 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914550 chr16:67914549 synonymous SNV . 0 20 hm5C_associated_SNPs_22935 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:67914540-67914560
64251 chr22 22025308 22025308 1 + T C GBM 22025316 + 22025296 22025336 41 CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGT CAGCCCTTTGTCCACCCAGTCTGCACTCCCGATGGCATCGT < 41bp 1 0.558109116833226 1 0.467713981866837 experiment 0.883781766333547 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22025316 chr22:22025308 nonsynonymous SNV 0.975 1 13 hm5C_associated_SNPs_22937 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:22025279-22025345
64251 chr6 138727171 138727171 1 + G T GBM 138727165 + 138727145 138727185 41 CGTGGAGCCTGGTTCAGGTCCTTTTAGTGAGTCTACCATTA CGTGGAGCCTGGTTCAGGTCCTTTTATTGAGTCTACCATTA < 41bp 1 0.100758633584619 1 0.019841730594635 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HEBP2;HEBP2 ENSG00000051620;ENSG00000051620 exonic;splicing Human other chr6:138727165 chr6:138727171 nonsynonymous SNV 0.999 3 27 hm5C_associated_SNPs_22938 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:138727138-138727176
64251 chr6 1391312 1391312 1 + A G GBM 1391304 + 1391284 1391324 41 CACTCCAGCATGTCCTCCTACTCGCTGGAGCAGAGCTACTT CACTCCAGCATGTCCTCCTACTCGCTGGGGCAGAGCTACTT < 41bp 1 0.467599667152339 1 0.242214858531952 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1391304 chr6:1391312 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_22939 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:1391295-1391318
64251 chr11 118403822 118403822 1 + C T GBM 118403838 + 118403818 118403858 41 TCACCAACCACACGGTGCAGCTGCAGCTCCGCAGCCTGGCA TCACTAACCACACGGTGCAGCTGCAGCTCCGCAGCCTGGCA < 41bp 1 0.697616384842467 1 0.82080066204071 experiment 0.604767230315067 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118403838 chr11:118403822 synonymous SNV . 0 5 hm5C_associated_SNPs_22940 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr11:118403802-118403841
64251 chr16 3339555 3339555 1 + A G GBM 3339545 + 3339525 3339565 41 GGTCGCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATG GGTCGCAAGGGGATTGGGCGCCTCCCCCAGGGGGTGGAATG < 41bp 1 0.0691833596287026 1 0.0623712837696075 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339545 chr16:3339555 nonsynonymous SNV 0.279 0 31 hm5C_associated_SNPs_22952 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr16 3339555 3339555 1 + A G GBM 3339549 + 3339529 3339569 41 GCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATGGAGC GCAAGGGGATTGGGCGCCTCCCCCAGGGGGTGGAATGGAGC < 41bp 1 0.58930301999452 1 0.665409207344055 experiment 0.82139396001096 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339549 chr16:3339555 nonsynonymous SNV 0.279 0 27 hm5C_associated_SNPs_22953 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr11 70181755 70181755 1 + G A GBM 70181768 + 70181748 70181788 41 ATGAGAGGCTTCAACTTCATCTTAAAGAGAGAATGGCTGCT ATGAGAGACTTCAACTTCATCTTAAAGAGAGAATGGCTGCT < 41bp 1 0.224700802367916 1 0.245926976203918 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70181768 chr11:70181755 synonymous SNV . 0 8 hm5C_associated_SNPs_22954 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:70181698-70181776
64251 chr11 43411222 43411222 1 + A C GBM 43411217 + 43411197 43411237 41 AACAGAAACAATTAGTTGCTCAAAAAATTCACATAGAAGAG AACAGAAACAATTAGTTGCTCAAAACATTCACATAGAAGAG < 41bp 1 0.377889945856441 1 0.30573707818985 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43411217 chr11:43411222 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_22955 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:43411205-43411238
64251 chr1 109804157 109804157 1 + G A GBM 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTGCCACAAAGGAGCGCGACAGGTTGCTGTTGTACAATGG < 41bp 1 0.218489901636067 1 0.14321756362915 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804157 nonsynonymous SNV 0.870 4 22 hm5C_associated_SNPs_22956 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr19 4409752 4409752 1 + G A GBM 4409753 + 4409733 4409773 41 CCCACCTCCACGCCCCTCCGCAGAGTGAGTATCTCCCATGG CCCACCTCCACGCCCCTCCACAGAGTGAGTATCTCCCATGG < 41bp 1 0.549205625985581 1 0.576551914215088 experiment 0.901588748028838 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409753 chr19:4409752 nonsynonymous SNV 0.223 0 20 hm5C_associated_SNPs_22957 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:4409719-4409752
64251 chr6 168363191 168363191 1 + G C GBM 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAGGCAACAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG < 41bp 1 0.260764257099303 1 0.548432230949402 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363191 nonsynonymous SNV 0.101 4 10 hm5C_associated_SNPs_22958 0 0 13 SRSF1 POSTAR2 GSE83923,GSM2221666 chr6:168363180-168363200
64251 chr1 26883501 26883501 1 + C T GBM 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGTTGTGAGATCAAGCCACCCTTCAAGCCAGC < 41bp 1 0.245508602393854 1 0.687900722026825 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883501 nonsynonymous SNV 0.992 4 13 hm5C_associated_SNPs_22977 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr6 87865454 87865454 1 + G T GBM 87865437 + 87865417 87865457 41 GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACT GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCTACT < 41bp 1 0.435734975773683 1 0.312638431787491 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87865437 chr6:87865454 nonsynonymous SNV 0.879 1 38 hm5C_associated_SNPs_22978 0 0 6 DDX24 POSTAR2 ENCODE chr6:87865373-87865482
64251 chr5 5464633 5464633 1 + G T GBM 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCCTGTGCCTGTCCGACTCCCACCCTGTGCATCTGGC < 41bp 1 0.132646508610496 1 0.311923563480377 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464633 nonsynonymous SNV 0.914 3 16 hm5C_associated_SNPs_22979 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr5:5464613-5464634
64251 chr19 49686170 49686170 1 + C T GBM 49686179 + 49686159 49686199 41 GGCCAGGGCTTCGGGGAGAGCGTAAGGACCGGGCAAAGCTG GGCCAGGGCTTTGGGGAGAGCGTAAGGACCGGGCAAAGCTG < 41bp 1 0.679207747765125 1 0.535246908664703 experiment 0.641584504469749 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49686179 chr19:49686170 synonymous SNV . 0 12 hm5C_associated_SNPs_22980 0 0 2 RPS3 POSTAR2 ENCODE chr19:49686159-49686182
64251 chr16 89759824 89759824 1 + G A GBM 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTTCGGCCTGGCCCAGGCCTATGGTGTCCCAGTA < 41bp 1 0.575585648681713 1 0.817821741104126 experiment 0.848828702636573 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759824 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_22982 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr5 176519769 176519769 1 + G A GBM 176519758 + 176519738 176519778 41 ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG ATTCCATCGGCCTCTCCTACCAGTCTGCCTGACTCACGGTG < 41bp 1 0.307253895566494 1 0.195961594581604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176519758 chr5:176519769 stopgain 0.998 1 32 hm5C_associated_SNPs_22983 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:176519747-176519775
64251 chr20 35862424 35862424 1 + G T GBM 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTTGATCCGGATTGGTGCCAATGTCTC < 41bp 1 0.564858621869767 1 0.523806571960449 experiment 0.870282756260465 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862424 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_22984 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:35862416-35862439
64251 chr17 27000493 27000493 1 + G A GBM 27000491 + 27000471 27000511 41 GATGAAGGCGAGGTGGTACCCCGAGTCACCAAGAAATTTGT GATGAAGGCGAGGTGGTACCCCAAGTCACCAAGAAATTTGT < 41bp 1 0.305225247937907 1 0.471307277679443 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27000491 chr17:27000493 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_22985 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:27000474-27000503
64251 chr7 100777094 100777094 1 + C T GBM 100777083 + 100777063 100777103 41 CTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATT CTTATGAAAAAGAGGTGCCTCTCTCTGCCCTTACCAACATT < 41bp 1 0.148058198999114 1 0.268760323524475 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777083 chr7:100777094 synonymous SNV . 0 32 hm5C_associated_SNPs_22986 0 0 3 NOL12 POSTAR2 ENCODE chr7:100777092-100777117
64251 chr7 100777094 100777094 1 + C T GBM 100777087 + 100777067 100777107 41 TGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGA TGAAAAAGAGGTGCCTCTCTCTGCCCTTACCAACATTCTGA < 41bp 1 0.48696797394787 1 0.461164683103561 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777087 chr7:100777094 synonymous SNV . 0 28 hm5C_associated_SNPs_22987 0 0 3 NOL12 POSTAR2 ENCODE chr7:100777092-100777117
64251 chr20 60882680 60882680 1 + C T GBM 60882662 + 60882642 60882682 41 CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCG CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCTCG < 41bp 1 0.302726443807576 1 0.514996588230133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882662 chr20:60882680 nonsynonymous SNV 0.954 1 39 hm5C_associated_SNPs_22989 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:60882659-60882697
64251 chr11 314342 314342 1 + G A GBM 314324 + 314304 314344 41 TCTTCTTGAACTGGTGCTGTCTGGGCTTCATAGCATTCGCC TCTTCTTGAACTGGTGCTGTCTGGGCTTCATAGCATTCACC < 41bp 1 0.793916699092592 1 0.411554336547852 experiment 0.412166601814815 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control IFITM1 ENSG00000185885 CDS Human protein_coding chr11:314324 chr11:314342 nonsynonymous SNV 0.001 1 39 hm5C_associated_SNPs_22990 0 0 3 IGF2BP1 POSTAR2 ENCODE chr11:314307-314347
64251 chr17 65735126 65735126 1 + G A GBM 65735123 + 65735103 65735143 41 GACATCCCAGCACAGCATATCACGGTAAGTGTTCATACAAG GACATCCCAGCACAGCATATCACAGTAAGTGTTCATACAAG < 41bp 1 0.496954772994055 1 0.288639783859253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735123 chr17:65735126 synonymous SNV . 0 24 hm5C_associated_SNPs_22991 0 0 2 PRPF8 POSTAR2 ENCODE chr17:65735092-65735155
64251 chr1 6271141 6271141 1 + C T GBM 6271142 + 6271122 6271162 41 GCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG GCCACTGCTGCTGCTGGGGTCACGTCGGGTGGCAGCTGCTG < 41bp 1 0.460103261699067 1 0.249319285154343 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF207 ENSG00000158286 CDS Human protein_coding chr1:6271142 chr1:6271141 nonsynonymous SNV 0.548 0 20 hm5C_associated_SNPs_23005 0 0 4 BUD13 POSTAR2 ENCODE chr1:6271127-6271302
64251 chr10 128810562 128810562 1 + G A GBM 128810545 + 128810525 128810565 41 AGCCGCTGAACATGTCATCCCGTTTTTCACCCAGGGTGGCA AGCCGCTGAACATGTCATCCCGTTTTTCACCCAGGGTAGCA < 41bp 1 0.0610467783599185 1 0.01605623960495 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128810545 chr10:128810562 synonymous SNV . 0 38 hm5C_associated_SNPs_23008 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:128810551-128810584
64251 chr19 49376806 49376806 1 + G A GBM 49376803 + 49376783 49376823 41 TGAAAACCAGCAGTTCCCTTCCTGAAGCCTGGGGACTTTTG TGAAAACCAGCAGTTCCCTTCCTAAAGCCTGGGGACTTTTG < 41bp 1 0.0728280505240513 1 0.126502722501755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376803 chr19:49376806 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_23009 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:49376786-49376841
64251 chr1 109643103 109643103 1 + G A GBM 109643087 + 109643067 109643107 41 CCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGC CCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAGGCGACGGC < 41bp 1 0.771247680954813 1 0.887897133827209 experiment 0.457504638090375 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643087 chr1:109643103 . . 0 37 hm5C_associated_SNPs_23010 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643103 109643103 1 + G A GBM 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGACGGCCACGCT < 41bp 1 0.178087268189248 1 0.0430663824081421 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643103 . . 0 31 hm5C_associated_SNPs_23011 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643103 109643103 1 + G A GBM 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT GGCGCTGTGCAGCGAGGCCCCTTAGGCGACGGCCACGCTGT < 41bp 1 0.67847627669919 1 0.147378742694855 experiment 0.643047446601619 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643103 . . 0 29 hm5C_associated_SNPs_23012 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643103 109643103 1 + G A GBM 109643104 + 109643084 109643124 41 CAGCGAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA CAGCGAGGCCCCTTAGGCGACGGCCACGCTGTGGTCCCCGA < 41bp 1 0.704982836072444 1 0.322390168905258 experiment 0.590034327855112 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643104 chr1:109643103 . . 0 20 hm5C_associated_SNPs_23013 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643103 109643103 1 + G A GBM 109643108 + 109643088 109643128 41 GAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC GAGGCCCCTTAGGCGACGGCCACGCTGTGGTCCCCGAGGTC < 41bp 1 0.633935089766804 1 0.49820664525032 experiment 0.732129820466392 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643108 chr1:109643103 . . 0 16 hm5C_associated_SNPs_23014 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643103 109643103 1 + G A GBM 109643120 + 109643100 109643140 41 GCGGCGGCCACGCTGTGGTCCCCGAGGTCCCGGAGCTGGCC GCGACGGCCACGCTGTGGTCCCCGAGGTCCCGGAGCTGGCC < 41bp 1 0.723094239545713 1 0.417340278625488 experiment 0.553811520908574 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643120 chr1:109643103 . . 0 4 hm5C_associated_SNPs_23015 0 0 51 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr15 91358357 91358357 1 + T C GBM 91358341 + 91358321 91358361 41 TCACATTTCAGGGGGTCTGCCACATGTAGAAAGATATCTTC TCACATTTCAGGGGGTCTGCCACATGTAGAAAGATACCTTC < 41bp 1 0.453067808328448 1 0.503970682621002 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358341 chr15:91358357 nonsynonymous SNV 0.004 0 37 hm5C_associated_SNPs_23016 1 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:91358339-91358368
64251 chr15 91358357 91358357 1 + T C GBM 91358367 + 91358347 91358387 41 TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTG TAGAAAGATACCTTCCAAAACGAAATCCTCCAGCATCATTG < 41bp 1 0.648378838851225 1 0.0550813674926758 experiment 0.70324232229755 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358367 chr15:91358357 nonsynonymous SNV 0.004 0 11 hm5C_associated_SNPs_23017 1 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:91358339-91358368
64251 chr2 219677652 219677652 1 + A C GBM 219677655 + 219677635 219677675 41 TTGCTTTCACAGGGAAGAAGCTGATTGATGAGAAGCTCGAA TTGCTTTCACAGGGAAGCAGCTGATTGATGAGAAGCTCGAA < 41bp 1 0.214400811550647 1 0.104777783155441 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677655 chr2:219677652 nonsynonymous SNV 0.996 0 18 hm5C_associated_SNPs_23018 0 0 1 PRPF8 POSTAR2 ENCODE chr2:219677618-219677678
64251 chr21 47754556 47754556 1 + G C GBM 47754537 + 47754517 47754557 41 GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATGT GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATCT < 41bp 1 0.644877606259175 1 0.426728904247284 experiment 0.710244787481649 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47754537 chr21:47754556 nonsynonymous SNV 0.000 0 40 hm5C_associated_SNPs_23019 1 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47754540-47754560
64251 chr1 154313341 154313341 1 + T C GBM 154313339 + 154313319 154313359 41 CCCCTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTA CCCCTGTGCAGTGTGGAGGTCACCCGTCTGGGCCACAGCTA < 41bp 1 0.359444346961648 1 0.0742284655570984 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313339 chr1:154313341 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_23021 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr1 154313341 154313341 1 + T C GBM 154313342 + 154313322 154313362 41 CTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTACTT CTGTGCAGTGTGGAGGTCACCCGTCTGGGCCACAGCTACTT < 41bp 1 0.152161743012834 1 0.0345670282840729 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313342 chr1:154313341 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_23022 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr1 120285535 120285535 1 + C G GBM 120285545 + 120285525 120285565 41 GGGCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCA GGGCTTGGTCGAAGGCACTACGCCTGTACTGCAGGGGCTCA < 41bp 1 0.589470526645142 1 0.128691583871841 experiment 0.821058946709717 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285545 chr1:120285535 nonsynonymous SNV 0.236 1 11 hm5C_associated_SNPs_23023 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:120285493-120285536
64251 chr1 120285535 120285535 1 + C G GBM 120285547 + 120285527 120285567 41 GCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCAAT GCTTGGTCGAAGGCACTACGCCTGTACTGCAGGGGCTCAAT < 41bp 1 0.289777519555123 1 0.0249567329883575 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285547 chr1:120285535 nonsynonymous SNV 0.236 1 9 hm5C_associated_SNPs_23024 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:120285493-120285536
64251 chr3 9976243 9976243 1 + C A GBM 9976249 + 9976229 9976269 41 AGTCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGC AGTCTTCTCCCCCGACTCAGCCCCATCCGTGTCATACCTGC < 41bp 1 0.510392679486097 1 0.149735063314438 experiment 0.979214641027806 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976249 chr3:9976243 nonsynonymous SNV 0.055 0 15 hm5C_associated_SNPs_23025 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976243 9976243 1 + C A GBM 9976251 + 9976231 9976271 41 TCTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCG TCTTCTCCCCCGACTCAGCCCCATCCGTGTCATACCTGCCG < 41bp 1 0.0316432458421591 1 0.0389211773872375 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976251 chr3:9976243 nonsynonymous SNV 0.055 0 13 hm5C_associated_SNPs_23026 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr3 9976243 9976243 1 + C A GBM 9976252 + 9976232 9976272 41 CTTCTCCCCCGCCTCAGCCCCATCCGTGTCATACCTGCCGG CTTCTCCCCCGACTCAGCCCCATCCGTGTCATACCTGCCGG < 41bp 1 0.177158875633906 1 0.236741662025452 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976252 chr3:9976243 nonsynonymous SNV 0.055 0 12 hm5C_associated_SNPs_23027 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9976240-9976260
64251 chr20 55968365 55968365 1 + C G GBM 55968352 + 55968332 55968372 41 TAGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTG TAGGCTTTGCCATTGGGGTGCAGCAGCTGCACCGCACCTTG < 41bp 1 0.452228377159081 1 0.348135381937027 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968352 chr20:55968365 nonsynonymous SNV 0.982 4 34 hm5C_associated_SNPs_23028 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968365 55968365 1 + C G GBM 55968361 + 55968341 55968381 41 CCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGG CCATTGGGGTGCAGCAGCTGCACCGCACCTTGATCCAGCGG < 41bp 1 0.27797974174315 1 0.263059079647064 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968361 chr20:55968365 nonsynonymous SNV 0.982 4 25 hm5C_associated_SNPs_23029 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968365 55968365 1 + C G GBM 55968363 + 55968343 55968383 41 ATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGAC ATTGGGGTGCAGCAGCTGCACCGCACCTTGATCCAGCGGAC < 41bp 1 0.423018584085818 1 0.259656518697739 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968363 chr20:55968365 nonsynonymous SNV 0.982 4 23 hm5C_associated_SNPs_23030 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968365 55968365 1 + C G GBM 55968364 + 55968344 55968384 41 TTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACT TTGGGGTGCAGCAGCTGCACCGCACCTTGATCCAGCGGACT < 41bp 1 0.0675879750372186 1 0.153093636035919 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968364 chr20:55968365 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_23031 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968365 55968365 1 + C G GBM 55968366 + 55968346 55968386 41 GGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTTA GGGGTGCAGCAGCTGCACCGCACCTTGATCCAGCGGACTTA < 41bp 1 0.211856332363652 1 0.0660496950149536 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968366 chr20:55968365 nonsynonymous SNV 0.982 4 20 hm5C_associated_SNPs_23032 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr4 79399128 79399128 1 + G A GBM 79399112 + 79399092 79399132 41 GAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGGA GAATTCACCCAGGCGAAGGTCATTATCAACGATACCAAGGA < 41bp 1 0.070132986999483 1 0.0905697345733643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79399112 chr4:79399128 nonsynonymous SNV 0.318 3 37 hm5C_associated_SNPs_23033 0 0 1 GRWD1 POSTAR2 ENCODE chr4:79399114-79399137
64251 chr17 48433460 48433460 1 + G A GBM 48433472 + 48433452 48433492 41 TTCCACACGGTGCTGGAGAACAGCCTGGCCTGTGAGACCCT TTCCACACAGTGCTGGAGAACAGCCTGGCCTGTGAGACCCT < 41bp 1 0.333790970979409 1 0.299581617116928 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433472 chr17:48433460 synonymous SNV . 0 9 hm5C_associated_SNPs_23034 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48433460-48433488
64251 chr9 131088069 131088069 1 + G A GBM 131088068 + 131088048 131088088 41 TGCCTTTCAGGGAGCGTCCCCGGATTTCGACATCCACCCTC TGCCTTTCAGGGAGCGTCCCCAGATTTCGACATCCACCCTC < 41bp 1 0.730241601501646 1 0.613592982292175 experiment 0.539516796996707 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ4 ENSG00000167113 CDS Human protein_coding chr9:131088068 chr9:131088069 nonsynonymous SNV 0.802 4 22 hm5C_associated_SNPs_23035 0 0 5 BUD13 POSTAR2 ENCODE chr9:131088038-131088167
64251 chr5 179150743 179150743 1 + C T GBM 179150759 + 179150739 179150779 41 CTTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAA CTTCTTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAA < 41bp 1 0.13537896387047 1 0.227688908576965 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150759 chr5:179150743 nonsynonymous SNV 0.561 1 5 hm5C_associated_SNPs_23037 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:179150657-179150756
64251 chr5 179150743 179150743 1 + C T GBM 179150760 + 179150740 179150780 41 TTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAAG TTCTTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAAG < 41bp 1 0.274664196145383 1 0.197727650403976 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150760 chr5:179150743 nonsynonymous SNV 0.561 1 4 hm5C_associated_SNPs_23038 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:179150657-179150756
64251 chr19 14674829 14674829 1 + C T GBM 14674819 + 14674799 14674839 41 CCTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCT CCTAACAGAGTACGCGGGGCCCCTTTTCATTTACCTGCTCT < 41bp 1 0.108607427793551 1 0.0783370733261108 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674819 chr19:14674829 synonymous SNV . 0 31 hm5C_associated_SNPs_23039 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14674804-14674857
64251 chr19 14674829 14674829 1 + C T GBM 14674820 + 14674800 14674840 41 CTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCTT CTAACAGAGTACGCGGGGCCCCTTTTCATTTACCTGCTCTT < 41bp 1 0.0304293413407903 1 0.0248109996318817 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674820 chr19:14674829 synonymous SNV . 0 30 hm5C_associated_SNPs_23040 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14674804-14674857
64251 chr3 40499407 40499407 1 + C T GBM 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGTCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA < 41bp 1 0.44607238149991 1 0.0867933332920074 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499407 synonymous SNV . 0 3 hm5C_associated_SNPs_23041 0 0 5 DDX3X POSTAR2 ENCODE chr3:40499383-40499408
64251 chr5 150639411 150639411 1 + C T GBM 150639408 + 150639388 150639428 41 ACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGAC ACTCTGGAGCCTGACCCCATCATTGTTCCTGGAAATGTGAC < 41bp 1 0.302958136568806 1 0.109937757253647 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GM2A ENSG00000196743 CDS Human protein_coding chr5:150639408 chr5:150639411 synonymous SNV . 0 24 hm5C_associated_SNPs_23042 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:150639381-150639416
64251 chr11 605204 605204 1 + A G GBM 605217 + 605197 605237 41 GTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGC GTGTTGAGGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGC < 41bp 1 0.429368728276839 1 0.751663327217102 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605217 chr11:605204 nonsynonymous SNV 0.034 0 8 hm5C_associated_SNPs_23043 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:605196-605234
64251 chr22 41735890 41735890 1 + C A GBM 41735900 + 41735880 41735920 41 CCCGTGTTCCCCGGCGGGACCCCACTGCTACCACCTGTGGT CCCGTGTTCCACGGCGGGACCCCACTGCTACCACCTGTGGT < 41bp 1 0.0709426571889368 1 0.163995623588562 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735900 chr22:41735890 nonsynonymous SNV 0.951 3 11 hm5C_associated_SNPs_23044 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41735876-41735897
64251 chr19 46878972 46878972 1 + C T GBM 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGCGACGAGCACAAGTGCTCCGTGGTGGACTCGCTGGACAT < 41bp 1 0.543654829489213 1 0.624387800693512 experiment 0.912690341021575 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878972 nonsynonymous SNV 0.540 2 16 hm5C_associated_SNPs_23045 0 0 6 GRWD1 POSTAR2 ENCODE chr19:46878904-46879006
64251 chr7 99954483 99954483 1 + G A GBM 99954487 + 99954467 99954507 41 TGGCAGTCCATCAAGGGGACCCACCTCACCATCACCCAGGG TGGCAGTCCATCAAGGAGACCCACCTCACCATCACCCAGGG < 41bp 1 0.222579081023558 1 0.0625664591789246 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG3L5P-PVRIG2P-PILRB ENSG00000121716 CDS Human protein_coding chr7:99954487 chr7:99954483 nonsynonymous SNV 0.005 1 17 hm5C_associated_SNPs_23046 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:99954481-99954529
64251 chr16 16150146 16150146 1 + C T GBM 16150150 + 16150130 16150170 41 CCTGGGTCTGCACGCCCTTTCTGGTGAGTGAAGCCACATTT CCTGGGTCTGCACGCCTTTTCTGGTGAGTGAAGCCACATTT < 41bp 1 0.745990928299972 1 0.498034983873367 experiment 0.508018143400056 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16150150 chr16:16150146 synonymous SNV . 0 17 hm5C_associated_SNPs_23047 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:16150121-16150152
64251 chr7 100485931 100485931 1 + C G GBM 100485923 + 100485903 100485943 41 CACAGGAGGCCCTCCATACCCCCATGCCCCGTATGGTGCTG CACAGGAGGCCCTCCATACCCCCATGCCGCGTATGGTGCTG < 41bp 1 0.43927887739129 1 0.224176794290543 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485923 chr7:100485931 nonsynonymous SNV 0.108 1 29 hm5C_associated_SNPs_23048 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100485925-100485954
64251 chr13 113719256 113719256 1 + G A GBM 113719251 + 113719231 113719271 41 TGTTTTCTCTGTCCCCAAGGCCATCGAAAGTTTCGCCCTCA TGTTTTCTCTGTCCCCAAGGCCATCAAAAGTTTCGCCCTCA < 41bp 1 0.0142743602225276 1 0.111308038234711 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113719251 chr13:113719256 nonsynonymous SNV 0.054 4 26 hm5C_associated_SNPs_23049 0 0 1 PPIG POSTAR2 ENCODE chr13:113719249-113719260
64251 chr1 163306614 163306614 1 + G A GBM 163306605 + 163306585 163306625 41 ATTCACTTCAGAGAAGCATGCCGTGAAACGTATATGGAATT ATTCACTTCAGAGAAGCATGCCGTGAAACATATATGGAATT < 41bp 1 0.158223079091634 1 0.330177307128906 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163306605 chr1:163306614 synonymous SNV . 0 30 hm5C_associated_SNPs_23050 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:163306591-163306614
64251 chr10 128830507 128830507 1 + G A GBM 128830517 + 128830497 128830537 41 AGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTC AGCATGCAGAACCTTGGGAGCTGCACCATTAGCAAGGACTC < 41bp 1 0.428154111610895 1 0.252163708209991 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128830517 chr10:128830507 nonsynonymous SNV 0.989 1 11 hm5C_associated_SNPs_23053 0 0 3 EIF3H POSTAR2 ENCODE chr10:128830400-128830511
64251 chr8 144801639 144801639 1 + G A GBM 144801634 + 144801614 144801654 41 AGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGGT AGCTGATCCTGGAGACCATCCCACCACCATCTGAGGAGGGT < 41bp 1 0.0678618832703915 1 0.220223754644394 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144801634 chr8:144801639 synonymous SNV . 0 26 hm5C_associated_SNPs_23055 0 0 1 ZNF622 POSTAR2 ENCODE chr8:144801615-144801672
64251 chrX 153627886 153627886 1 + G A GBM 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGAGTTTCCACTTTGTGGCCACATGGTGTCAGATGAATAT < 41bp 1 0.24286856285992 1 0.495407044887543 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627886 synonymous SNV . 0 11 hm5C_associated_SNPs_23056 0 0 65 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627825-153627935
64251 chr12 105519878 105519878 1 + A G GBM 105519876 + 105519856 105519896 41 ATTTGCACATAGTATTCGGTCAATTTTTGCAAATGTAGAAG ATTTGCACATAGTATTCGGTCAGTTTTTGCAAATGTAGAAG < 41bp 1 0.243234021675019 1 0.0981546342372894 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519876 chr12:105519878 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_23058 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519878 105519878 1 + A G GBM 105519885 + 105519865 105519905 41 TAGTATTCGGTCAATTTTTGCAAATGTAGAAGCCAAACTTG TAGTATTCGGTCAGTTTTTGCAAATGTAGAAGCCAAACTTG < 41bp 1 0.378215958084302 1 0.303459465503693 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519885 chr12:105519878 nonsynonymous SNV 0.999 0 14 hm5C_associated_SNPs_23059 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr12 105519878 105519878 1 + A G GBM 105519898 + 105519878 105519918 41 ATTTTTGCAAATGTAGAAGCCAAACTTGGTAATGTAAATCG GTTTTTGCAAATGTAGAAGCCAAACTTGGTAATGTAAATCG < 41bp 1 0.211086921933359 1 0.101297736167908 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519898 chr12:105519878 nonsynonymous SNV 0.999 0 1 hm5C_associated_SNPs_23060 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:105519824-105519885
64251 chr3 47041686 47041686 1 + G T GBM 47041673 + 47041653 47041693 41 CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGGATCAGGC CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGTATCAGGC < 41bp 1 0.111181853920511 1 0.709576010704041 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041673 chr3:47041686 nonsynonymous SNV 0.132 1 34 hm5C_associated_SNPs_23061 0 0 2 EIF3H POSTAR2 ENCODE chr3:47041678-47041705
64251 chr2 46609718 46609718 1 + G A GBM 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACCAGGACTACAGCCTGTCATCAGCCCACAA < 41bp 1 0.378074185483464 1 0.108287572860718 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609718 synonymous SNV . 0 30 hm5C_associated_SNPs_23062 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831629 chr2:46609700-46609720
64251 chr1 16199442 16199442 1 + G C GBM 16199454 + 16199434 16199474 41 GGGTGACAGAGACCTACGCACGGATTATAATGAACCAGGCA GGGTGACACAGACCTACGCACGGATTATAATGAACCAGGCA < 41bp 1 0.150468715045549 1 0.551310181617737 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199454 chr1:16199442 nonsynonymous SNV 0.998 3 9 hm5C_associated_SNPs_23063 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16199300-16199620
64251 chr10 103827288 103827288 1 + C T GBM 103827278 + 103827258 103827298 41 CCGAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCC CCGAGTTTGCCCAGCACCGCCGGCTTGATGTTCACCTCCCC < 41bp 1 0.497970228482292 1 0.709940016269684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827278 chr10:103827288 nonsynonymous SNV 0.580 0 31 hm5C_associated_SNPs_23064 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:103827287-103827331
64251 chr15 22969226 22969226 1 + C T GBM 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGTTGGACGGCTTCGACGCCATGTTCCG < 41bp 1 0.511155775865704 1 0.261859208345413 experiment 0.977688448268591 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969226 synonymous SNV . 0 16 hm5C_associated_SNPs_23065 0 0 1 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr5 6651998 6651998 1 + C T GBM 6652008 + 6651988 6652028 41 AAAGCCTATGCCACTGTTGGCGTGTACAATGGCGATTATGT AAAGCCTATGTCACTGTTGGCGTGTACAATGGCGATTATGT < 41bp 1 0.135604641096871 1 0.128128081560135 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6652008 chr5:6651998 nonsynonymous SNV 0.002 2 11 hm5C_associated_SNPs_23066 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6651976-6652003
64251 chr11 73074847 73074847 1 + C T GBM 73074840 + 73074820 73074860 41 ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGCGGC ATCCGTGACCGCAGGAACAGCATGAAGTTCCAGCATGCGGC < 41bp 1 0.38864884191212 1 0.163143575191498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73074840 chr11:73074847 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_23067 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73074798-73074863
64251 chr3 58067448 58067448 1 + G C GBM 58067455 + 58067435 58067475 41 CCAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAAC CCAAGCTCAAGCCCGGGGCTCCTCTCAAACCCAAACTCAAC < 41bp 1 0.014456608218596 1 0.0318981111049652 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067455 chr3:58067448 synonymous SNV . 0 14 hm5C_associated_SNPs_23068 0 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr3 58067448 58067448 1 + G C GBM 58067456 + 58067436 58067476 41 CAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAACC CAAGCTCAAGCCCGGGGCTCCTCTCAAACCCAAACTCAACC < 41bp 1 0.0419385297045123 1 0.200260102748871 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067456 chr3:58067448 synonymous SNV . 0 13 hm5C_associated_SNPs_23069 0 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr11 61898029 61898029 1 + G A GBM 61898018 + 61897998 61898038 41 CAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGC CAGGGCGAGCAGAAGGCTTGCCAAGAAGACTACCGAAGAGC < 41bp 1 0.161405415145976 1 0.156053632497787 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61898018 chr11:61898029 nonsynonymous SNV 0.144 0 32 hm5C_associated_SNPs_23070 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61898009-61898035
64251 chr1 145518168 145518168 1 + C T GBM 145518156 + 145518136 145518176 41 GTTGTCCTGAGATTCTGCATCACTGTTAGTCACCTCAATCG GTTGTCCTGAGATTCTGCATCACTGTTAGTCATCTCAATCG < 41bp 1 0.225496552260232 1 0.0369031727313995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145518156 chr1:145518168 synonymous SNV . 0 33 hm5C_associated_SNPs_23071 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145518148-145518185
64251 chr10 73039785 73039785 1 + G T GBM 73039798 + 73039778 73039818 41 CAGGAAGGCCTGGATGAGGCCACCGGTGAGCCCGCCCCACT CAGGAAGTCCTGGATGAGGCCACCGGTGAGCCCGCCCCACT < 41bp 1 0.673073516122581 1 0.585698306560516 experiment 0.653852967754837 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73039798 chr10:73039785 nonsynonymous SNV 0.997 1 8 hm5C_associated_SNPs_23074 0 0 1 DDX24 POSTAR2 ENCODE chr10:73039727-73039803
64251 chr2 71577125 71577125 1 + G A GBM 71577126 + 71577106 71577146 41 TAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAA TAATTTCATCTGTAAGCCAACAAGAGCGGATCCCACATGAA < 41bp 1 0.546074924595494 1 0.708515703678131 experiment 0.907850150809013 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71577126 chr2:71577125 synonymous SNV . 0 20 hm5C_associated_SNPs_23075 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:71576926-71577160
64251 chr1 155288033 155288033 1 + A G GBM 155288044 + 155288024 155288064 41 TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTG TGAAGCTCTGTTGCCGGGAGCAGCCCTATTACCTGAACCTG < 41bp 1 0.324547354708735 1 0.345382511615753 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155288044 chr1:155288033 nonsynonymous SNV 0.997 1 10 hm5C_associated_SNPs_23076 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chr1:155287987-155288040
64251 chr22 29695792 29695792 1 + C A GBM 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGCCCCCTGGACCTTTGATGGAAAAGATGGGAG < 41bp 1 0.434522213551693 1 0.170402020215988 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695792 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_23077 0 0 52 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:29695775-29695796
64251 chr1 231700308 231700308 1 + C T GBM 231700298 + 231700278 231700318 41 CCTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTG CCTCTGATGCACAGGATAAGCAGTTTGGTATTTGGAGACTG < 41bp 1 0.448663234834167 1 0.0553272366523743 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSNAX ENSG00000116918 CDS Human protein_coding chr1:231700298 chr1:231700308 nonsynonymous SNV 0.810 2 31 hm5C_associated_SNPs_23078 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231700283-231700336
64251 chr6 138576690 138576690 1 + G A GBM 138576703 + 138576683 138576723 41 CGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC CGTCTCCAGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC < 41bp 1 0.728997822568349 1 0.828098237514496 experiment 0.542004354863302 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF3 ENSG00000112379 CDS Human protein_coding chr6:138576703 chr6:138576690 synonymous SNV . 0 8 hm5C_associated_SNPs_23079 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr6:138576680-138576700
64251 chr9 131196696 131196696 1 + G A GBM 131196705 + 131196685 131196725 41 ACAGCTACCTCGGACGGAAGCAGGTGAACCCTGAGAAGGAG ACAGCTACCTCAGACGGAAGCAGGTGAACCCTGAGAAGGAG < 41bp 1 0.542911536107551 1 0.853305578231812 experiment 0.914176927784898 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131196705 chr9:131196696 nonsynonymous SNV 0.900 4 12 hm5C_associated_SNPs_23080 0 0 3 BUD13 POSTAR2 ENCODE chr9:131196687-131196753
64251 chrX 73046727 73046727 1 - T C GBM 73046709 - 73046689 73046729 41 GGACAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC GGGCAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC < 41bp 1 0.288530388725166 1 0.319032371044159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046709 chrX:73046727 . . 0 3 hm5C_associated_SNPs_23081 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046727 73046727 1 - T C GBM 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACCTGGGGCAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.21553056842254 1 0.119330406188965 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046727 . . 0 15 hm5C_associated_SNPs_23082 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046727 73046727 1 - T C GBM 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACCTGGGGCAGGACACATGGAAGGCCTAA < 41bp 1 0.565774809592283 1 0.583631873130798 experiment 0.868450380815435 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046727 . . 0 20 hm5C_associated_SNPs_23083 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chr11 43413469 43413469 1 + C A GBM 43413476 + 43413456 43413496 41 GGAGTATAGATGACATAGGTCACCTCATTCATGAAGGCCTA GGAGTATAGATGAAATAGGTCACCTCATTCATGAAGGCCTA < 41bp 1 0.306295433099138 1 0.0431027114391327 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTC17 ENSG00000052841 CDS Human protein_coding chr11:43413476 chr11:43413469 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_23084 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:43413441-43413479
64251 chr5 17275370 17275370 1 + C T GBM 17275381 + 17275361 17275401 41 CAATGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG CAATGTGAATGACGAGAAAGCCAAGGAGAAAGACAAGAAGG < 41bp 1 0.391049605783987 1 0.516731858253479 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275381 chr5:17275370 synonymous SNV . 0 10 hm5C_associated_SNPs_23087 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr11 120352059 120352059 1 + C T GBM 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCCATGATAGGCATCCCTGCTGTGGAATCCACCCACC < 41bp 1 0.578144568828821 1 0.0980882048606873 experiment 0.843710862342357 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352059 nonsynonymous SNV 0.005 1 12 hm5C_associated_SNPs_23089 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:120352031-120352083
64251 chr14 105936268 105936268 1 + C T GBM 105936253 + 105936233 105936273 41 TGATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGG TGATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGTGGCGG < 41bp 1 0.199267342759794 1 0.0962875485420227 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936253 chr14:105936268 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_23090 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105936234-105936282
64251 chr14 105936268 105936268 1 + C T GBM 105936255 + 105936235 105936275 41 ATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGGAT ATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGTGGCGGAT < 41bp 1 0.53072075464455 1 0.257138133049011 experiment 0.9385584907109 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936255 chr14:105936268 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_23091 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105936234-105936282
64251 chr14 105936268 105936268 1 + C T GBM 105936265 + 105936245 105936285 41 GCTCCCTGCCCCCAGTCAAGCGGCGGCGGATGAACTGGATC GCTCCCTGCCCCCAGTCAAGCGGTGGCGGATGAACTGGATC < 41bp 1 0.61098622742138 1 0.686614811420441 experiment 0.77802754515724 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936265 chr14:105936268 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_23092 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105936234-105936282
64251 chr14 105936268 105936268 1 + C T GBM 105936285 + 105936265 105936305 41 CGGCGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT CGGTGGCGGATGAACTGGATCGACGCCCCGGATGACGTGTT < 41bp 1 0.543264432705592 1 0.50993424654007 experiment 0.913471134588815 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936285 chr14:105936268 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_23093 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105936234-105936282
64251 chr12 58109576 58109576 1 + G A GBM 58109596 + 58109576 58109616 41 GACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA AACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA < 41bp 1 0.431616085370223 1 0.625046014785767 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109596 chr12:58109576 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_23094 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:58109551-58109583
64251 chr19 17626983 17626983 1 + C T GBM 17626993 + 17626973 17627013 41 TGGCTGCAGACGCATCTTCTCTCCAGACTGCCGATCCCAGA TGGCTGCAGATGCATCTTCTCTCCAGACTGCCGATCCCAGA < 41bp 1 0.794492735900441 1 0.915041446685791 experiment 0.411014528199117 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGLS ENSG00000130313 CDS Human protein_coding chr19:17626993 chr19:17626983 nonsynonymous SNV 0.243 2 11 hm5C_associated_SNPs_23095 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:17626980-17627000
64251 chr7 134215407 134215407 1 + A G GBM 134215396 + 134215376 134215416 41 CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTGAAAG CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCGAAGTGAAAG < 41bp 1 0.269998597673646 1 0.372850239276886 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134215396 chr7:134215407 nonsynonymous SNV 0.102 0 32 hm5C_associated_SNPs_23096 0 0 1 RPS3 POSTAR2 ENCODE chr7:134215403-134215440
64251 chr2 27456321 27456321 1 + G A GBM 27456304 + 27456284 27456324 41 CCGGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGGCTG CCGGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGACTG < 41bp 1 0.671352117262179 1 0.320110350847244 experiment 0.657295765475642 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456304 chr2:27456321 nonsynonymous SNV 0.910 5 38 hm5C_associated_SNPs_23097 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:27456312-27456329
64251 chr11 14666553 14666553 1 + G A GBM 14666571 + 14666551 14666591 41 TTGCAAAATATTCAGGAGACCGTCGTTGCCTTGTATTTCCA TTACAAAATATTCAGGAGACCGTCGTTGCCTTGTATTTCCA < 41bp 1 0.187843321831872 1 0.0992560684680939 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14666571 chr11:14666553 nonsynonymous SNV 0.886 0 3 hm5C_associated_SNPs_23098 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:14666553-14666575
64251 chr2 233684613 233684613 1 + A G GBM 233684612 + 233684592 233684632 41 AAGAGGAAGAAAGACAGCAGCAAGAAGAAGCTCTTAGAAGA AAGAGGAAGAAAGACAGCAGCGAGAAGAAGCTCTTAGAAGA < 41bp 1 0.691938426846069 1 0.706699073314667 experiment 0.616123146307863 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684612 chr2:233684613 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_23099 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:233684613-233684640
64251 chr2 233684613 233684613 1 + A G GBM 233684622 + 233684602 233684642 41 AAGACAGCAGCAAGAAGAAGCTCTTAGAAGACTGGAAGAGA AAGACAGCAGCGAGAAGAAGCTCTTAGAAGACTGGAAGAGA < 41bp 1 0.149111450814432 1 0.191605299711227 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684622 chr2:233684613 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_23100 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:233684613-233684640
64251 chr19 41778018 41778018 1 + C T GBM 41778031 + 41778011 41778051 41 GAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC GAGCACCTACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC < 41bp 1 0.192824370159743 1 0.174564480781555 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41778031 chr19:41778018 synonymous SNV . 0 8 hm5C_associated_SNPs_23101 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:41777978-41778018
64251 chr2 128867298 128867298 1 + C A GBM 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGACTTGTGAATCTGATACCCTTGAGGCTATTCTACTGA < 41bp 1 0.0422321637607687 1 0.0741803050041199 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867298 nonsynonymous SNV 0.186 1 32 hm5C_associated_SNPs_23102 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:128867264-128867315
64251 chr7 129394920 129394920 1 + G A GBM 129394901 + 129394881 129394921 41 ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACAG < 41bp 1 0.621882559402356 1 0.187761157751083 experiment 0.756234881195287 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394901 chr7:129394920 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_23103 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr16 68331157 68331157 1 + C T GBM 68331160 + 68331140 68331180 41 CTATCACCAGAGGCACCCAGCAGCTTTGCTTTTGTGTCCTG CTATCACCAGAGGCACCTAGCAGCTTTGCTTTTGTGTCCTG < 41bp 1 0.545887575274411 1 0.562118113040924 experiment 0.908224849451179 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68331160 chr16:68331157 stopgain 0.995 1 18 hm5C_associated_SNPs_23104 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:68331152-68331183
64251 chr16 731823 731823 1 + G T GBM 731817 + 731797 731837 41 CTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGA CTGGAAGAGTGCCAGCGAAACCACGATGGTGATGAGGACGA < 41bp 1 0.414474301866063 1 0.148663848638535 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STUB1 ENSG00000103266 CDS Human protein_coding chr16:731817 chr16:731823 nonsynonymous SNV 0.997 0 27 hm5C_associated_SNPs_23105 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr16:731813-731838
64251 chrX 77378404 77378404 1 + T A GBM 77378418 + 77378398 77378438 41 TGGTGGTGGAATGGCTTTTACCTTCCTTAAGGTGCTCAACA TGGTGGAGGAATGGCTTTTACCTTCCTTAAGGTGCTCAACA < 41bp 1 0.0488952602715474 1 0.26745742559433 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378418 chrX:77378404 synonymous SNV . 0 7 hm5C_associated_SNPs_23106 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:77378385-77378421
64251 chr1 16260498 16260498 1 + C G GBM 16260507 + 16260487 16260527 41 AAAAACAGCACCTCCAGTGACAAACAACTCTGAGATACAAG AAAAACAGCACGTCCAGTGACAAACAACTCTGAGATACAAG < 41bp 1 0.0554188754961438 1 0.278106302022934 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16260507 chr1:16260498 nonsynonymous SNV 0.019 1 12 hm5C_associated_SNPs_23108 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:16260440-16260500
64251 chr1 16260498 16260498 1 + C G GBM 16260511 + 16260491 16260531 41 ACAGCACCTCCAGTGACAAACAACTCTGAGATACAAGCCTC ACAGCACGTCCAGTGACAAACAACTCTGAGATACAAGCCTC < 41bp 1 0.245880994563199 1 0.490259319543839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16260511 chr1:16260498 nonsynonymous SNV 0.019 1 8 hm5C_associated_SNPs_23109 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:16260440-16260500
64251 chr1 179310423 179310423 1 + G T GBM 179310411 + 179310391 179310431 41 TGTGTTAGCATATACACTGCCACCAGCTTCCCGGTTCATCA TGTGTTAGCATATACACTGCCACCAGCTTCCCTGTTCATCA < 41bp 1 0.732040460694884 1 0.144783794879913 experiment 0.535919078610233 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179310411 chr1:179310423 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_23111 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:179310220-179310440
64251 chr11 126143239 126143239 1 + G A GBM 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTAGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA < 41bp 1 0.489521203365099 1 0.1925890147686 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143239 synonymous SNV . 0 4 hm5C_associated_SNPs_23112 0 0 2 SF3A3 POSTAR2 ENCODE chr11:126143166-126143240
64251 chr1 33745906 33745906 1 + G C GBM 33745921 + 33745901 33745941 41 ATCAAGACAATCCAGGGCCACGGCCTGCTTGGCCCCCCCAA ATCAACACAATCCAGGGCCACGGCCTGCTTGGCCCCCCCAA < 41bp 1 0.458143785608048 1 0.616447925567627 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33745921 chr1:33745906 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_23123 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:33745906-33745930
64251 chr18 20573449 20573449 1 + C G GBM 20573447 + 20573427 20573467 41 CCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATC CCAAAGATTCCCCAGGGGAGCCGTGTTCACAGGAATGCATC < 41bp 1 0.255794120706708 1 0.0921313166618347 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBBP8 ENSG00000101773 CDS Human protein_coding chr18:20573447 chr18:20573449 synonymous SNV . 0 23 hm5C_associated_SNPs_23124 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:20573419-20573496
64251 chr5 71492195 71492195 1 + G A GBM 71492181 + 71492161 71492201 41 GGCCAGTGGGGATGACCGAGCCGAAGAAGACATGGATGAGG GGCCAGTGGGGATGACCGAGCCGAAGAAGACATGAATGAGG < 41bp 1 0.431325930718494 1 0.419742405414581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492181 chr5:71492195 nonsynonymous SNV 0.976 1 35 hm5C_associated_SNPs_23126 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71492186-71492308
64251 chr2 216190036 216190036 1 + G A GBM 216190020 + 216190000 216190040 41 AGTGGCTTCTCCAGGTGTAACTGTTGAGGAGGCTGTGGAGC AGTGGCTTCTCCAGGTGTAACTGTTGAGGAGGCTGTAGAGC < 41bp 1 0.348903245851499 1 0.129114180803299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216190020 chr2:216190036 synonymous SNV . 0 37 hm5C_associated_SNPs_23127 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:216190031-216190052
64251 chr22 24466765 24466765 1 + G A GBM 24466762 + 24466742 24466782 41 CTGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCA CTGTACTAGGACTCCTTGCTCCGACTGAAGGACTATCGGCA < 41bp 1 0.0755133228254924 1 0.743984818458557 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466762 chr22:24466765 synonymous SNV . 0 24 hm5C_associated_SNPs_23128 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr22:24466741-24466775
64251 chr22 24466765 24466765 1 + G A GBM 24466763 + 24466743 24466783 41 TGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAG TGTACTAGGACTCCTTGCTCCGACTGAAGGACTATCGGCAG < 41bp 1 0.28169324477542 1 0.29466450214386 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466763 chr22:24466765 synonymous SNV . 0 23 hm5C_associated_SNPs_23129 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr22:24466741-24466775
64251 chr22 24466765 24466765 1 + G A GBM 24466766 + 24466746 24466786 41 ACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAGTGT ACTAGGACTCCTTGCTCCGACTGAAGGACTATCGGCAGTGT < 41bp 1 0.545331934792319 1 0.42811793088913 experiment 0.909336130415361 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466766 chr22:24466765 synonymous SNV . 0 20 hm5C_associated_SNPs_23130 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr22:24466741-24466775
64251 chr19 41111402 41111402 1 + G A GBM 41111411 + 41111391 41111431 41 GGCCCTTGGGAGGAGGCGGACGCTGAGGCGGTGGCGCGGGC GGCCCTTGGGAAGAGGCGGACGCTGAGGCGGTGGCGCGGGC < 41bp 1 0.551930989527806 1 0.492002993822098 experiment 0.896138020944388 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41111411 chr19:41111402 synonymous SNV . 0 12 hm5C_associated_SNPs_23131 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:41111376-41111406
64251 chr19 41084426 41084426 1 + C A GBM 41084423 + 41084403 41084443 41 TCTTCTTGTGGAAACGTCCTCTTCAATGGTTACCTGCCGCC TCTTCTTGTGGAAACGTCCTCTTAAATGGTTACCTGCCGCC < 41bp 1 0.434953567956631 1 0.583484768867493 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41084423 chr19:41084426 stopgain 1.000 3 24 hm5C_associated_SNPs_23132 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:41084413-41084433
64251 chr6 20402625 20402625 1 + G C GBM 20402606 + 20402586 20402626 41 CCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGG CCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCCG < 41bp 1 0.415271027169564 1 0.715549349784851 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402606 chr6:20402625 synonymous SNV . 0 40 hm5C_associated_SNPs_23133 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402609 + 20402589 20402629 41 CGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCG CGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCG < 41bp 1 0.4379644168755 1 0.69890558719635 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402609 chr6:20402625 synonymous SNV . 0 37 hm5C_associated_SNPs_23134 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402610 + 20402590 20402630 41 GGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGC GGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGC < 41bp 1 0.598006529933286 1 0.715354919433594 experiment 0.803986940133427 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402610 chr6:20402625 synonymous SNV . 0 36 hm5C_associated_SNPs_23135 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402612 + 20402592 20402632 41 CTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGT CTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGCGT < 41bp 1 0.63724608706754 1 0.343620866537094 experiment 0.725507825864919 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402612 chr6:20402625 synonymous SNV . 0 34 hm5C_associated_SNPs_23136 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402615 + 20402595 20402635 41 CGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACA CGCCGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGCGTACA < 41bp 1 0.267220000692313 1 0.463896751403809 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402615 chr6:20402625 synonymous SNV . 0 31 hm5C_associated_SNPs_23137 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402616 + 20402596 20402636 41 GCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACAT GCCGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGCGTACAT < 41bp 1 0.785265994093275 1 0.777781128883362 experiment 0.42946801181345 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402616 chr6:20402625 synonymous SNV . 0 30 hm5C_associated_SNPs_23138 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402618 + 20402598 20402638 41 CGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC CGCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGCGTACATCC < 41bp 1 0.270548990343976 1 0.70870977640152 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402618 chr6:20402625 synonymous SNV . 0 28 hm5C_associated_SNPs_23139 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr6 20402625 20402625 1 + G C GBM 20402619 + 20402599 20402639 41 GCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCCA GCCGCCGCCGCCGCTGCCGCCGCCCCCGGCGCGTACATCCA < 41bp 1 0.436423834779476 1 0.437420785427094 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402619 chr6:20402625 synonymous SNV . 0 27 hm5C_associated_SNPs_23140 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr1 26885365 26885365 1 + C T GBM 26885380 + 26885360 26885400 41 GCCACCGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC GCCACTGGCCTGATGGAAGACGACGGCAAGCCTCGTGCCCC < 41bp 1 0.772888403120975 1 0.563632190227509 experiment 0.45422319375805 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885380 chr1:26885365 synonymous SNV . 0 6 hm5C_associated_SNPs_23141 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:26885350-26885371
64251 chr16 67578997 67578997 1 + G A GBM 67578992 + 67578972 67579012 41 CAGTATGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC CAGTATGGTGCCCGCCTCTCCCTGCACCAGCCAGGCTTGGC < 41bp 1 0.0804556514324442 1 0.264137327671051 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578992 chr16:67578997 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_23142 0 0 2 LSM11 POSTAR2 ENCODE chr16:67578976-67579021
64251 chr6 31637206 31637206 1 + G A GBM 31637187 + 31637167 31637207 41 AAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGG AAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCAG < 41bp 1 0.771799566742908 1 0.101768970489502 experiment 0.456400866514185 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CSNK2B ENSG00000204435;ENSG00000263020 CDS Human other chr6:31637187 chr6:31637206 nonsynonymous SNV 0.996 4 40 hm5C_associated_SNPs_23143 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:31637157-31637209
64251 chr11 126143242 126143242 1 + C T GBM 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCTGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA < 41bp 1 0.478002479910502 1 0.270557343959808 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143242 synonymous SNV . 0 7 hm5C_associated_SNPs_23144 0 0 1 SF3B4 POSTAR2 ENCODE chr11:126143181-126143274
64251 chr7 44806136 44806136 1 + G A GBM 44806140 + 44806120 44806160 41 CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCG CAAACCCTCCCCCAGCATCCCGGCAGTCCTTGGGCCAAGCG < 41bp 1 0.665007057842252 1 0.299267828464508 experiment 0.669985884315496 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806140 chr7:44806136 synonymous SNV . 0 17 hm5C_associated_SNPs_23146 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44806112-44806158
64251 chr2 216995664 216995664 1 + C T GBM 216995648 + 216995628 216995668 41 TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAG TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATTGGAG < 41bp 1 0.336832638998427 1 0.478262215852737 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995648 chr2:216995664 nonsynonymous SNV 0.979 0 37 hm5C_associated_SNPs_23149 0 0 41 FMR1 POSTAR2 GSE39682,GSM977615 chr2:216995615-216995690
64251 chr22 42276831 42276831 1 + C T GBM 42276812 + 42276792 42276832 41 CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCTG < 41bp 1 0.0714799073538593 1 0.0488421022891998 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276812 chr22:42276831 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_23150 0 0 5 FMR1 POSTAR2 ENCODE chr22:42276758-42276831
64251 chr2 220097297 220097297 1 + A G GBM 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACACTGGATCGGGAGAGGGCTACGTTTGAGAAGTTGAGCC < 41bp 1 0.654135758225371 1 0.541342735290527 experiment 0.691728483549257 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097297 synonymous SNV . 0 25 hm5C_associated_SNPs_23151 0 0 10 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr16 56970705 56970705 1 + C A GBM 56970702 + 56970682 56970722 41 GGAAGTTCTTCGGAACCTTTCTTCCCCTGGATGGGAAAACA GGAAGTTCTTCGGAACCTTTCTTACCCTGGATGGGAAAACA < 41bp 1 0.209181725537996 1 0.192314773797989 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56970702 chr16:56970705 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_23152 0 0 13 BUD13 POSTAR2 ENCODE chr16:56970689-56970759
64251 chr21 45113183 45113183 1 + A C GBM 45113170 + 45113150 45113190 41 CCTCCACGGGGTGCTGAAGACCCCCACCAGCTCACCTGCCA CCTCCACGGGGTGCTGAAGACCCCCACCAGCTCCCCTGCCA < 41bp 1 0.340875565293387 1 0.110569953918457 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP1B ENSG00000160208 CDS Human protein_coding chr21:45113170 chr21:45113183 synonymous SNV . 0 34 hm5C_associated_SNPs_23153 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917669 chr21:45113179-45113205
64251 chr2 220097276 220097276 1 + A G GBM 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACGCTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC < 41bp 1 0.779027675198186 1 0.845437407493591 experiment 0.441944649603629 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097276 synonymous SNV . 0 4 hm5C_associated_SNPs_23154 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:220097220-220097281
64251 chr1 24996658 24996658 1 + G A GBM 24996652 + 24996632 24996672 41 GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGT GTCTGTAAGAAGGGTCTCATCCTCCCAATCTGTCTCCGGGT < 41bp 1 0.185957194201404 1 0.049877256155014 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996652 chr1:24996658 nonsynonymous SNV 0.969 2 27 hm5C_associated_SNPs_23156 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996658 24996658 1 + G A GBM 24996653 + 24996633 24996673 41 TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTC TCTGTAAGAAGGGTCTCATCCTCCCAATCTGTCTCCGGGTC < 41bp 1 0.72823296677976 1 0.39053738117218 experiment 0.54353406644048 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996653 chr1:24996658 nonsynonymous SNV 0.969 2 26 hm5C_associated_SNPs_23157 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996658 24996658 1 + G A GBM 24996673 + 24996653 24996693 41 CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA CTCCCAATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA < 41bp 1 0.558272767260607 1 0.0307576358318329 experiment 0.883454465478786 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996673 chr1:24996658 nonsynonymous SNV 0.969 2 6 hm5C_associated_SNPs_23158 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996658 24996658 1 + G A GBM 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CCAATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC < 41bp 1 0.628975568277123 1 0.30437907576561 experiment 0.742048863445754 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996658 nonsynonymous SNV 0.969 2 3 hm5C_associated_SNPs_23159 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr4 148539127 148539127 1 + G A GBM 148539125 + 148539105 148539145 41 AACATGCCTTGCACTTGTACCTGGAGGAACTGGAGACAGTG AACATGCCTTGCACTTGTACCTAGAGGAACTGGAGACAGTG < 41bp 1 0.795261181488909 1 0.528615832328796 experiment 0.409477637022181 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148539125 chr4:148539127 stopgain 0.986 1 23 hm5C_associated_SNPs_23161 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:148539096-148539154
64251 chr1 29069444 29069444 1 + T C GBM 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGCGGC < 41bp 1 0.320758805033645 1 0.209482580423355 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069444 nonsynonymous SNV 0.998 1 38 hm5C_associated_SNPs_23162 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29069427-29069451
64251 chr14 97014175 97014175 1 + A G GBM 97014156 + 97014136 97014176 41 TATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGATAT TATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGATGT < 41bp 1 0.529182206424222 1 0.233920693397522 experiment 0.941635587151555 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97014156 chr14:97014175 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_23163 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr14:97014149-97014187
64251 chr3 184648327 184648327 1 + G T GBM 184648321 + 184648301 184648341 41 GACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA GACACAGTGCAGAGGAGAAGCAGTCTTTATGGCAGAAAGCA < 41bp 1 0.125388488312282 1 0.296919763088226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184648321 chr3:184648327 nonsynonymous SNV 0.993 1 27 hm5C_associated_SNPs_23164 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184648293-184648331
64251 chr11 35684861 35684861 1 + A C GBM 35684862 + 35684842 35684882 41 CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGG CCACGGCTCCCAGGCCTGGCCCCCGCCAGCTGACGGAGAGG < 41bp 1 0.380531824455338 1 0.484659999608994 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684862 chr11:35684861 nonsynonymous SNV 0.001 0 20 hm5C_associated_SNPs_23165 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684861 35684861 1 + A C GBM 35684863 + 35684843 35684883 41 CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGG CACGGCTCCCAGGCCTGGCCCCCGCCAGCTGACGGAGAGGG < 41bp 1 0.190404390540697 1 0.248777478933334 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684863 chr11:35684861 nonsynonymous SNV 0.001 0 19 hm5C_associated_SNPs_23166 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684861 35684861 1 + A C GBM 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCCCAGGCCTGGCCCCCGCCAGCTGACGGAGAGGGG < 41bp 1 0.182352697205746 1 0.318183481693268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684861 nonsynonymous SNV 0.001 0 18 hm5C_associated_SNPs_23167 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684861 35684861 1 + A C GBM 35684865 + 35684845 35684885 41 CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGG CGGCTCCCAGGCCTGGCCCCCGCCAGCTGACGGAGAGGGGG < 41bp 1 0.773852425406782 1 0.787102460861206 experiment 0.452295149186435 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684865 chr11:35684861 nonsynonymous SNV 0.001 0 17 hm5C_associated_SNPs_23168 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr10 14896134 14896134 1 + C A GBM 14896127 + 14896107 14896147 41 CTATGTTTTTAATTTAGATCCTTCAAACATGATGTGAGAGG CTATGTTTTTAATTTAGATCCTTCAAAAATGATGTGAGAGG < 41bp 1 0.173579707264252 1 0.415853708982468 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14896127 chr10:14896134 nonsynonymous SNV 0.974 2 28 hm5C_associated_SNPs_23169 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:14896133-14896134
64251 chr11 57427181 57427181 1 + G A GBM 57427163 + 57427143 57427183 41 TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCA TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCACA < 41bp 1 0.564679557098707 1 0.234447926282883 experiment 0.870640885802586 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427163 chr11:57427181 nonsynonymous SNV 0.937 2 39 hm5C_associated_SNPs_23170 0 0 1 RBM15 POSTAR2 ENCODE chr11:57427145-57427202
64251 chr15 85326217 85326217 1 + C A GBM 85326199 + 85326179 85326219 41 ACACAATGGATTCCGGGGCTCAGATCTGCCTCCAGATCCCC ACACAATGGATTCCGGGGCTCAGATCTGCCTCCAGATCACC < 41bp 1 0.269279119423396 1 0.103686600923538 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326199 chr15:85326217 nonsynonymous SNV 0.924 1 39 hm5C_associated_SNPs_23171 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85326195-85326241
64251 chr16 3339529 3339529 1 + G A GBM 3339545 + 3339525 3339565 41 GGTCGCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATG GGTCACAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATG < 41bp 1 0.0730793603091927 1 0.0773998498916626 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339545 chr16:3339529 nonsynonymous SNV 0.003 0 5 hm5C_associated_SNPs_23172 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3339502-3339529
64251 chr16 3339529 3339529 1 + G A GBM 3339549 + 3339529 3339569 41 GCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATGGAGC ACAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATGGAGC < 41bp 1 0.570942442171355 1 0.469867497682571 experiment 0.858115115657291 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339549 chr16:3339529 nonsynonymous SNV 0.003 0 1 hm5C_associated_SNPs_23173 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3339502-3339529
64251 chr19 18961017 18961017 1 + G A GBM 18961004 + 18960984 18961024 41 TGTCGCAACGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC TGTCGCAACGTCTTCCTCCTCGGCTTCATCCCGACCAAAGC < 41bp 1 0.562590416279872 1 0.817958235740662 experiment 0.874819167440257 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961004 chr19:18961017 nonsynonymous SNV 0.848 4 34 hm5C_associated_SNPs_23176 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:18960989-18961019
64251 chr1 171519332 171519332 1 + C T GBM 171519315 + 171519295 171519335 41 TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTT TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAATGTT < 41bp 1 0.076175944828442 1 0.740661382675171 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171519315 chr1:171519332 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_23177 0 0 24 EWSR1 POSTAR2 SRX029344 chr1:171519311-171519333
64251 chr2 204259426 204259426 1 + G A GBM 204259431 + 204259411 204259451 41 TTCTTTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGC TTCTTTTTGTAGGCGACACTCCCCCTATCGCACACTGGAGC < 41bp 1 0.29830983675702 1 0.171510696411133 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259431 chr2:204259426 synonymous SNV . 0 16 hm5C_associated_SNPs_23178 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:204259407-204259431
64251 chr2 204259426 204259426 1 + G A GBM 204259435 + 204259415 204259455 41 TTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGCCAGT TTTTGTAGGCGACACTCCCCCTATCGCACACTGGAGCCAGT < 41bp 1 0.194139252014839 1 0.187280416488647 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259435 chr2:204259426 synonymous SNV . 0 12 hm5C_associated_SNPs_23179 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:204259407-204259431
64251 chr6 133137703 133137703 1 + G T GBM 133137684 + 133137664 133137704 41 GAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGT GAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGTT < 41bp 1 0.483585896712073 1 0.421117931604385 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 splicing Human protein_coding chr6:133137684 chr6:133137703 . 1.000 0 40 hm5C_associated_SNPs_23182 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137671-133137874
64251 chr6 133137703 133137703 1 + G T GBM 133137694 + 133137674 133137714 41 GTGCTGAACACCAAATCAACCTAATTAAGGTAAGGCTGCTA GTGCTGAACACCAAATCAACCTAATTAAGTTAAGGCTGCTA < 41bp 1 0.389952102801867 1 0.0517831742763519 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 splicing Human protein_coding chr6:133137694 chr6:133137703 . 1.000 0 30 hm5C_associated_SNPs_23183 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137671-133137874
64251 chr14 23239012 23239012 1 + C T GBM 23239030 + 23239010 23239050 41 TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC TGTCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC < 41bp 1 0.342896175163161 1 0.0425302088260651 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239030 chr14:23239012 nonsynonymous SNV 0.988 3 3 hm5C_associated_SNPs_23184 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:23238997-23239035
64251 chr22 20079086 20079086 1 + G A GBM 20079093 + 20079073 20079113 41 GCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA GCAGGCGGAGTCCAAGAGGCCCATCTTGCCAGCCAATCAGA < 41bp 1 0.0479973878963221 1 0.062752366065979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079093 chr22:20079086 nonsynonymous SNV 0.958 1 14 hm5C_associated_SNPs_23186 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:20079080-20079100
64251 chr3 52237939 52237939 1 + C T GBM 52237938 + 52237918 52237958 41 TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAAGAAC TGAAAACCGATGGAGGGGATCTCAGTGGACTGCTGAAGAAC < 41bp 1 0.655017188005016 1 0.300185084342957 experiment 0.689965623989968 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52237938 chr3:52237939 nonsynonymous SNV 0.204 1 22 hm5C_associated_SNPs_23187 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52237919-52237942
64251 chr16 56867244 56867244 1 + A G GBM 56867224 + 56867204 56867244 41 GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCA GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCG < 41bp 1 0.49631908450105 1 0.12014964222908 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867224 chr16:56867244 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_23188 0 0 4 FMR1 POSTAR2 ENCODE chr16:56867217-56867272
64251 chr12 6618912 6618912 1 + C T GBM 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT GCCTTTCGAGCTCAGGGGTCCCTGGCTATGCTGCAGCACTT < 41bp 1 0.129104836859806 1 0.101226806640625 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618912 nonsynonymous SNV 0.958 0 19 hm5C_associated_SNPs_23189 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:6618878-6618914
64251 chr7 140379047 140379047 1 + C T GBM 140379056 + 140379036 140379076 41 CCTCTGCGCCCCTTTGTCACCAGAGAAGTCTTGGTGGAAAC CCTCTGCGCCCTTTTGTCACCAGAGAAGTCTTGGTGGAAAC < 41bp 1 0.558324115567962 1 0.685140252113342 experiment 0.883351768864075 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140379056 chr7:140379047 synonymous SNV . 0 12 hm5C_associated_SNPs_23190 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140379026-140379051
64251 chr12 110474083 110474083 1 + T C GBM 110474069 + 110474049 110474089 41 ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAAT ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCCTCGAAT < 41bp 1 0.0362559954481559 1 0.0379354953765869 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110474069 chr12:110474083 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_23191 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:110474066-110474086
64251 chr7 135312778 135312778 1 + C T GBM 135312770 + 135312750 135312790 41 TCATCCCTACCCCAGTGGATCGCTACCGCCAGATTCTCCTC TCATCCCTACCCCAGTGGATCGCTACCGTCAGATTCTCCTC < 41bp 1 0.486846184061189 1 0.0886625647544861 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312770 chr7:135312778 synonymous SNV . 0 29 hm5C_associated_SNPs_23192 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135312748-135312781
64251 chrX 129173191 129173191 1 + G A GBM 129173210 + 129173190 129173230 41 GGCTACCTACTCGGGTCAGACAGCCATGAAGCTGGCCAGCA GACTACCTACTCGGGTCAGACAGCCATGAAGCTGGCCAGCA < 41bp 1 0.356018550459258 1 0.567987680435181 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129173210 chrX:129173191 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_23193 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129173174-129173202
64251 chr16 81077296 81077296 1 + A G GBM 81077278 + 81077258 81077298 41 AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACAAGAAC AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACAAGGAC < 41bp 1 0.170411599106681 1 0.0863426029682159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077278 chr16:81077296 nonsynonymous SNV 0.027 0 39 hm5C_associated_SNPs_23197 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:81077280-81077300
64251 chr11 10774300 10774300 1 + A G GBM 10774299 + 10774279 10774319 41 CAGGAACACACACAACTGCACATATGGATTGCTTTGGCGGT CAGGAACACACACAACTGCACGTATGGATTGCTTTGGCGGT < 41bp 1 0.0848447928180342 1 0.0312488377094269 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10774299 chr11:10774300 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_23198 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10774271-10774303
64251 chr11 10774300 10774300 1 + A G GBM 10774310 + 10774290 10774330 41 ACAACTGCACATATGGATTGCTTTGGCGGTCAGTATTCATG ACAACTGCACGTATGGATTGCTTTGGCGGTCAGTATTCATG < 41bp 1 0.0852487711694153 1 0.0105448067188263 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10774310 chr11:10774300 nonsynonymous SNV 0.998 1 11 hm5C_associated_SNPs_23199 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10774271-10774303
64251 chr2 10560060 10560060 1 + C T GBM 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTCTTCCCCTACGGTGACGCTTCCAA < 41bp 1 0.0861390603424803 1 0.28806072473526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560060 synonymous SNV . 0 30 hm5C_associated_SNPs_23200 0 0 1 METAP2 POSTAR2 ENCODE chr2:10560056-10560107
64251 chr9 140137126 140137126 1 + C T GBM 140137116 + 140137096 140137136 41 GACTGGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCC GACTGGGTCTGGGATGGGTACCCTCCTCATTAGCAAGATCC < 41bp 1 0.0960448265478274 1 0.0263412594795227 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137116 chr9:140137126 synonymous SNV . 0 31 hm5C_associated_SNPs_23201 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137080-140137140
64251 chr9 140137126 140137126 1 + C T GBM 140137120 + 140137100 140137140 41 GGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCCGGGA GGGTCTGGGATGGGTACCCTCCTCATTAGCAAGATCCGGGA < 41bp 1 0.729681239275686 1 0.431407392024994 experiment 0.540637521448628 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137120 chr9:140137126 synonymous SNV . 0 27 hm5C_associated_SNPs_23202 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137080-140137140
64251 chr2 242683167 242683167 1 + C T GBM 242683180 + 242683160 242683200 41 CAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCA CAACCAATGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCA < 41bp 1 0.381355097269896 1 0.504148662090302 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242683180 chr2:242683167 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_23205 0 0 3 PPIG POSTAR2 ENCODE chr2:242683054-242683176
64251 chr7 157041143 157041143 1 + G A GBM 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGAACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA < 41bp 1 0.322942011912317 1 0.547413289546967 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041143 nonsynonymous SNV 0.976 2 4 hm5C_associated_SNPs_23208 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:157041096-157041145
64251 chr6 33411312 33411312 1 + C T GBM 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGTCCC < 41bp 1 0.172242973765783 1 0.202210634946823 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411312 nonsynonymous SNV 0.997 0 38 hm5C_associated_SNPs_23209 0 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr18 77802161 77802161 1 + T C GBM 77802159 + 77802139 77802179 41 CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT CTTTTGATGTCCCAGCAGACCCCGAGGAATGTGCCACCGAT < 41bp 1 0.7817240727764 1 0.573329329490662 experiment 0.4365518544472 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBFA ENSG00000101546 CDS Human protein_coding chr18:77802159 chr18:77802161 nonsynonymous SNV 0.182 3 23 hm5C_associated_SNPs_23210 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77802152-77802190
64251 chr14 23070613 23070613 1 + C T GBM 23070600 + 23070580 23070620 41 GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCC GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCTCACTTCC < 41bp 1 0.297664485867172 1 0.156561553478241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070600 chr14:23070613 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_23211 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chr19 54621969 54621969 1 + T C GBM 54621957 + 54621937 54621977 41 TTCTCCTTTCCTACAGTTTGCTGAGATTATGATGAAGATTG TTCTCCTTTCCTACAGTTTGCTGAGATTATGACGAAGATTG < 41bp 1 0.275665929080682 1 0.0819819271564484 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54621957 chr19:54621969 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_23212 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:54621951-54621989
64251 chr3 4774885 4774885 1 + C T GBM 4774884 + 4774864 4774904 41 CCCACTGTCAGCAGGAGGACCCGGCAAGCCCGGGGGAGGAG CCCACTGTCAGCAGGAGGACCTGGCAAGCCCGGGGGAGGAG < 41bp 1 0.281888167372067 1 0.277482539415359 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4774884 chr3:4774885 synonymous SNV . 0 22 hm5C_associated_SNPs_23213 0 0 1 PPIG POSTAR2 ENCODE chr3:4774860-4774905
64251 chr3 130672707 130672707 1 + A G GBM 130672711 + 130672691 130672731 41 CAGCTTGACAGGTGAGACAACGCCTTGTTCTAAGGTGACAG CAGCTTGACAGGTGAGGCAACGCCTTGTTCTAAGGTGACAG < 41bp 1 0.628484517287792 1 0.0854204595088959 experiment 0.743030965424416 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130672711 chr3:130672707 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_23214 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr3:130672689-130672710
64251 chr6 44219879 44219879 1 + G A GBM 44219869 + 44219849 44219889 41 AAGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGA AAGGAATTTGATGGGAAGAGCCTGGTCTCAATTACCAAGGA < 41bp 1 0.330101404749577 1 0.156937092542648 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219869 chr6:44219879 nonsynonymous SNV 0.995 0 31 hm5C_associated_SNPs_23215 0 0 51 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219879 44219879 1 + G A GBM 44219870 + 44219850 44219890 41 AGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG AGGAATTTGATGGGAAGAGCCTGGTCTCAATTACCAAGGAG < 41bp 1 0.772796960650987 1 0.130633622407913 experiment 0.454406078698027 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219870 chr6:44219879 nonsynonymous SNV 0.995 0 30 hm5C_associated_SNPs_23216 0 0 51 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219879 44219879 1 + G A GBM 44219877 + 44219857 44219897 41 TGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGG TGATGGGAAGAGCCTGGTCTCAATTACCAAGGAGGGTCTGG < 41bp 1 0.31179791480857 1 0.2497738301754 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219877 chr6:44219879 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_23217 0 0 51 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219879 44219879 1 + G A GBM 44219883 + 44219863 44219903 41 GAAGAGCCTGGTCTCAGTTACCAAGGAGGGTCTGGAGCTGC GAAGAGCCTGGTCTCAATTACCAAGGAGGGTCTGGAGCTGC < 41bp 1 0.382554462473933 1 0.495126187801361 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219883 chr6:44219879 nonsynonymous SNV 0.995 0 17 hm5C_associated_SNPs_23218 0 0 51 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr11 65271931 65271931 1 + C A GBM 65271929 + 65271909 65271949 41 GTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGA GTATGATTAAAAGTTGTGTTCCACAATGCTTGGAGTAGTGA < 41bp 1 0.321664225560001 1 0.0508936643600464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271929 chr11:65271931 . . 0 23 hm5C_associated_SNPs_23219 0 0 122 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271900-65272140
64251 chr6 111288893 111288893 1 + A G GBM 111288899 + 111288879 111288919 41 GAGTTGTGAACAGGAGAAACCAATGCACTTGGAAATAGAAG GAGTTGTGAACAGGGGAAACCAATGCACTTGGAAATAGAAG < 41bp 1 0.249520289971267 1 0.434838533401489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288899 chr6:111288893 nonsynonymous SNV 0.116 0 15 hm5C_associated_SNPs_23221 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:111288825-111288893
64251 chr11 61915978 61915978 1 + G T GBM 61915982 + 61915962 61916002 41 GGGAGAAGGCCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGG GGGAGAAGGCCCTGCGTCTGCAGAAGGAGCAGCTGCAGAGG < 41bp 1 0.795199614882272 1 0.598429203033447 experiment 0.409600770235456 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915982 chr11:61915978 synonymous SNV . 0 17 hm5C_associated_SNPs_23223 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr11 61915978 61915978 1 + G T GBM 61915991 + 61915971 61916011 41 CCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAG CCCTGCGTCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAG < 41bp 1 0.223336808380967 1 0.219943106174469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915991 chr11:61915978 synonymous SNV . 0 8 hm5C_associated_SNPs_23224 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr11 61915978 61915978 1 + G T GBM 61915994 + 61915974 61916014 41 TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG TGCGTCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG < 41bp 1 0.553727901216472 1 0.65637594461441 experiment 0.892544197567055 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915994 chr11:61915978 synonymous SNV . 0 5 hm5C_associated_SNPs_23225 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr11 61915978 61915978 1 + G T GBM 61915997 + 61915977 61916017 41 GGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAGAAG GTCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAGAAG < 41bp 1 0.37117391248368 1 0.4947569668293 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61915997 chr11:61915978 synonymous SNV . 0 2 hm5C_associated_SNPs_23226 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr19 50721024 50721024 1 + G T HNSC 50721013 + 50720993 50721033 41 CAGTGACCGAGGGGGCCTATCGGAGCATGCTGCAGGGTGAG CAGTGACCGAGGGGGCCTATCGGAGCATGCTTCAGGGTGAG < 41bp 1 0.719294826927323 1 0.875875473022461 experiment 0.561410346145353 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50721013 chr19:50721024 synonymous SNV . 0 32 hm5C_associated_SNPs_23227 0 0 1 PRPF8 POSTAR2 ENCODE chr19:50720962-50721069
64251 chr2 232576621 232576621 1 + G T HNSC 232576618 + 232576598 232576638 41 AGAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTA AGAATGAGGAAAATGGGGAGCAGTAGGCTGACAATGAGGTA < 41bp 1 0.435628536724046 1 0.402423739433289 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576618 chr2:232576621 stopgain 0.999 0 24 hm5C_associated_SNPs_23228 0 0 71 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr2:232576620-232576640
64251 chr2 232576621 232576621 1 + G T HNSC 232576625 + 232576605 232576645 41 GGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGACGAAG GGAAAATGGGGAGCAGTAGGCTGACAATGAGGTAGACGAAG < 41bp 1 0.397026811274273 1 0.277562320232391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576625 chr2:232576621 stopgain 0.999 0 17 hm5C_associated_SNPs_23229 0 0 71 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr2:232576620-232576640
64251 chr2 232576621 232576621 1 + G T HNSC 232576641 + 232576621 232576661 41 GAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGG TAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGG < 41bp 1 0.48602990541228 1 0.34844845533371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576641 chr2:232576621 stopgain 0.999 0 1 hm5C_associated_SNPs_23230 0 0 71 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr2:232576620-232576640
64251 chr8 21960135 21960135 1 + G A HNSC 21960138 + 21960118 21960158 41 CGGGCCAGGCTCCTGGGGAGCAGTGAGTACCAAGGGTGCCA CGGGCCAGGCTCCTGGGAAGCAGTGAGTACCAAGGGTGCCA < 41bp 1 0.45905870109401 1 0.742861926555634 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21960138 chr8:21960135 nonsynonymous SNV 0.999 0 18 hm5C_associated_SNPs_23231 0 0 1 PPIG POSTAR2 ENCODE chr8:21960044-21960140
64251 chr12 112590581 112590581 1 + G A HNSC 112590564 + 112590544 112590584 41 GCCTTCCAAGCAACAGGGAGCTGGGGATGCAGAAGAGGAAG GCCTTCCAAGCAACAGGGAGCTGGGGATGCAGAAGAGAAAG < 41bp 1 0.684524822584203 1 0.503264486789703 experiment 0.630950354831595 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112590564 chr12:112590581 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_23232 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112590574-112590612
64251 chr11 605232 605232 1 + G A HNSC 605217 + 605197 605237 41 GTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTGAGAGC GTGTTGAAGCCAGTGGAGCCCTCTTTGGGGCTGCTAAGAGC < 41bp 1 0.370452485249657 1 0.584210991859436 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605217 chr11:605232 synonymous SNV . 0 36 hm5C_associated_SNPs_23234 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:605196-605234
64251 chr5 908535 908535 1 + C T HNSC 908541 + 908521 908561 41 TCAGATGCCATCCGCGTGGTCAATGCTGTCTTGACCCAAAT TCAGATGCCATCCGTGTGGTCAATGCTGTCTTGACCCAAAT < 41bp 1 0.369678838966784 1 0.154636085033417 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908541 chr5:908535 synonymous SNV . 0 15 hm5C_associated_SNPs_23239 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:908515-908545
64251 chr1 57161705 57161705 1 + A G HNSC 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTCCCATTTGATGATGAGCATGTACCTGCGTTATTTAAG < 41bp 1 0.164179092851371 1 0.0378483831882477 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161705 nonsynonymous SNV 0.374 2 30 hm5C_associated_SNPs_23241 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:57161668-57161706
64251 chr11 118516501 118516501 1 + G A HNSC 118516515 + 118516495 118516535 41 GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGG GATGCTAAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGG < 41bp 1 0.646501349872367 1 0.76174533367157 experiment 0.706997300255266 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516515 chr11:118516501 synonymous SNV . 0 7 hm5C_associated_SNPs_23242 0 0 4 DDX24 POSTAR2 ENCODE chr11:118516458-118516530
64251 chr3 155628611 155628611 1 + G A HNSC 155628593 + 155628573 155628613 41 CTTTATGATATAGCTGGATGCAGTGGAACCTTCACCGTGCA CTTTATGATATAGCTGGATGCAGTGGAACCTTCACCGTACA < 41bp 1 0.443691528779464 1 0.470602810382843 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628593 chr3:155628611 synonymous SNV . 0 39 hm5C_associated_SNPs_23243 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155628551-155628653
64251 chr17 28961071 28961071 1 + G C HNSC 28961053 + 28961033 28961073 41 TATGACTATAAGAACAAACTCATCTTCGCAATATCTGTGAC TATGACTATAAGAACAAACTCATCTTCGCAATATCTGTCAC < 41bp 1 0.0751458585615982 1 0.100877463817596 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28961053 chr17:28961071 . . 0 39 hm5C_associated_SNPs_23244 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr17:28961060-28961080
64251 chr4 174242759 174242759 1 + C T HNSC 174242739 + 174242719 174242759 41 TGTGTTTTCCAGAACCTGCACAGATTTACTCATATTCCTTC TGTGTTTTCCAGAACCTGCACAGATTTACTCATATTCCTTT < 41bp 1 0.251930322280083 1 0.120232582092285 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174242739 chr4:174242759 nonsynonymous SNV 0.998 1 41 hm5C_associated_SNPs_23245 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:174242728-174242776
64251 chr15 89843085 89843085 1 + G A HNSC 89843066 + 89843046 89843086 41 ATACACTTCAATTCCTACTTCAGTGGAAGAGTCGGGAAAGA ATACACTTCAATTCCTACTTCAGTGGAAGAGTCGGGAAAAA < 41bp 1 0.313807960273382 1 0.596841752529144 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89843066 chr15:89843085 synonymous SNV . 0 40 hm5C_associated_SNPs_23246 0 0 3 UCHL5 POSTAR2 ENCODE chr15:89843066-89843153
64251 chr1 223943283 223943283 1 + C G HNSC 223943279 + 223943259 223943299 41 TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG TGCACCTTCCTGGTGGGGCTCATTGAGAAGCACCGACGGCG < 41bp 1 0.21416597140712 1 0.096655011177063 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943279 chr1:223943283 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_23247 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr1 223943283 223943283 1 + C G HNSC 223943292 + 223943272 223943312 41 TGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATG TGGGGCTCATTGAGAAGCACCGACGGCGGCAGAGGAAGATG < 41bp 1 0.669611810420313 1 0.369115471839905 experiment 0.660776379159373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943292 chr1:223943283 nonsynonymous SNV 0.998 5 12 hm5C_associated_SNPs_23248 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr1 223943283 223943283 1 + C G HNSC 223943301 + 223943281 223943321 41 TTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGAC TTGAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGAC < 41bp 1 0.72485044351297 1 0.601225972175598 experiment 0.550299112974059 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943301 chr1:223943283 nonsynonymous SNV 0.998 5 3 hm5C_associated_SNPs_23249 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr6 7572178 7572178 1 + G A HNSC 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTAATG < 41bp 1 0.49366465613895 1 0.675338268280029 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572178 synonymous SNV . 0 38 hm5C_associated_SNPs_23251 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:7572160-7572180
64251 chr6 7572178 7572178 1 + G A HNSC 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACAAGCAAGAAACATGGATGCTAATGGAGCTGCAGAAGATT < 41bp 1 0.127217971250325 1 0.0763287842273712 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572178 synonymous SNV . 0 23 hm5C_associated_SNPs_23252 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:7572160-7572180
64251 chr2 217364725 217364725 1 + G C HNSC 217364705 + 217364685 217364725 41 GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAC < 41bp 1 0.69107932416575 1 0.189842402935028 experiment 0.6178413516685 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364705 chr2:217364725 nonsynonymous SNV 0.903 1 41 hm5C_associated_SNPs_23253 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364725 217364725 1 + G C HNSC 217364733 + 217364713 217364753 41 TTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACA TTCCTGCATGAACACAGTGGCTGGCGGTGCCTGGACGTACA < 41bp 1 0.700842859313601 1 0.191708832979202 experiment 0.598314281372799 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364733 chr2:217364725 nonsynonymous SNV 0.903 1 13 hm5C_associated_SNPs_23254 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364725 217364725 1 + G C HNSC 217364737 + 217364717 217364757 41 TGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACAAGTG TGCATGAACACAGTGGCTGGCGGTGCCTGGACGTACAAGTG < 41bp 1 0.602606834807942 1 0.488430768251419 experiment 0.794786330384116 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364737 chr2:217364725 nonsynonymous SNV 0.903 1 9 hm5C_associated_SNPs_23255 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364725 217364725 1 + G C HNSC 217364742 + 217364722 217364762 41 GAAGACAGTGGCTGGCGGTGCCTGGACGTACAAGTGAGTCT GAACACAGTGGCTGGCGGTGCCTGGACGTACAAGTGAGTCT < 41bp 1 0.33982162459807 1 0.360063135623932 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364742 chr2:217364725 nonsynonymous SNV 0.903 1 4 hm5C_associated_SNPs_23256 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 136537915 136537915 1 + G A HNSC 136537910 + 136537890 136537930 41 GACTTCAGTGAGAGTAACATCGTCAGAACCCCCAAACCCTG GACTTCAGTGAGAGTAACATCGTCAAAACCCCCAAACCCTG < 41bp 1 0.76604792636791 1 0.691784977912903 experiment 0.46790414726418 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136537910 chr2:136537915 nonsynonymous SNV 0.074 1 26 hm5C_associated_SNPs_23257 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:136537915-136537940
64251 chr14 102452268 102452268 1 + G A HNSC 102452273 + 102452253 102452293 41 TCACCGCTCGCCTTCGGGATCAGCTTGGCACAGCCAAGAAT TCACCGCTCGCCTTCAGGATCAGCTTGGCACAGCCAAGAAT < 41bp 1 0.146951273621716 1 0.166642338037491 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102452273 chr14:102452268 nonsynonymous SNV 0.844 4 16 hm5C_associated_SNPs_23259 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102452251-102452282
64251 chr19 50002790 50002790 1 + C T HNSC 50002809 + 50002789 50002829 41 TCGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTG TTGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTG < 41bp 1 0.545073248984029 1 0.426436901092529 experiment 0.909853502031942 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS11 ENSG00000142534 CDS Human protein_coding chr19:50002809 chr19:50002790 synonymous SNV . 0 2 hm5C_associated_SNPs_23261 0 0 58 UPF1 POSTAR2 GSE69586,GSM1704215 chr19:50002760-50002800
64251 chr19 45797632 45797632 1 + C T HNSC 45797648 + 45797628 45797668 41 ATGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG ATGATCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG < 41bp 1 0.047475198875157 1 0.0609906911849976 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797648 chr19:45797632 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_23263 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:45797607-45797638
64251 chr17 17697199 17697199 1 + C T HNSC 17697208 + 17697188 17697228 41 CCAAGTATCAGCACTACGGGCAGCAAGGCCAGGGCTACTGC CCAAGTATCAGTACTACGGGCAGCAAGGCCAGGGCTACTGC < 41bp 1 0.420658582305061 1 0.107636600732803 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697208 chr17:17697199 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_23265 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:17697198-17697200
64251 chr6 31598918 31598918 1 + G A HNSC 31598935 + 31598915 31598955 41 GGAGCGAGACTCCTCCAGTACCTCCCCCACCACCCTATCTG GGAACGAGACTCCTCCAGTACCTCCCCCACCACCCTATCTG < 41bp 1 0.100419766401215 1 0.0350587069988251 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598935 chr6:31598918 nonsynonymous SNV 0.992 2 4 hm5C_associated_SNPs_23266 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31598900-31598920
64251 chr19 11141507 11141507 1 + G T HNSC 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGGGCTCTGCCTGAACCTCCAGTCGGC < 41bp 1 0.428207999637468 1 0.292483627796173 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141507 nonsynonymous SNV 0.960 5 22 hm5C_associated_SNPs_23267 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chr10 103291078 103291078 1 + A T HNSC 103291084 + 103291064 103291104 41 TATCCTAAAATTATACAAGACATTGAGGTAAGAATCTATGT TATCCTAAAATTATTCAAGACATTGAGGTAAGAATCTATGT < 41bp 1 0.0529305546808117 1 0.0465764999389648 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BTRC ENSG00000166167 CDS Human protein_coding chr10:103291084 chr10:103291078 synonymous SNV . 0 15 hm5C_associated_SNPs_23268 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103291058-103291082
64251 chr3 108353773 108353773 1 + G T HNSC 108353763 + 108353743 108353783 41 AAAGTTGCTGTGTTTATTTCCATAAAATTTGCTGGAAAAAG AAAGTTGCTGTGTTTATTTCCATAAAATTTTCTGGAAAAAG < 41bp 1 0.142200911452504 1 0.452269107103348 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108353763 chr3:108353773 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_23269 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:108353766-108353805
64251 chr19 11105592 11105592 1 + C A HNSC 11105582 + 11105562 11105602 41 TCACAGGCAAAATCCAGAAGCTGACCAAGGCAGTGGCCACG TCACAGGCAAAATCCAGAAGCTGACCAAGGAAGTGGCCACG < 41bp 1 0.153027378129113 1 0.210264325141907 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105582 chr19:11105592 nonsynonymous SNV 0.992 4 31 hm5C_associated_SNPs_23270 0 0 6 DDX24 POSTAR2 ENCODE chr19:11105516-11105606
64251 chr17 58024140 58024140 1 + G C HNSC 58024120 + 58024100 58024140 41 CTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATG CTTTTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATC < 41bp 1 0.484207621542207 1 0.24544757604599 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58024120 chr17:58024140 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_23272 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:58024116-58024150
64251 chr17 58024140 58024140 1 + G C HNSC 58024123 + 58024103 58024143 41 TTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATGAAT TTCCCATGATCTCCAAACGGCCAGAGCACCTGCGTATCAAT < 41bp 1 0.37811419584982 1 0.101139724254608 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58024123 chr17:58024140 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_23273 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:58024116-58024150
64251 chrX 135106627 135106627 1 + C T HNSC 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTTATGCTT < 41bp 1 0.305103006555702 1 0.741466403007507 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106627 nonsynonymous SNV 0.998 2 35 hm5C_associated_SNPs_23274 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:135106606-135106644
64251 chr10 127512149 127512149 1 + G T HNSC 127512131 + 127512111 127512151 41 CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGCGGCGTG CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGCGGCTTG < 41bp 1 0.370193330698784 1 0.160802781581879 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCCIP ENSG00000107949 CDS Human protein_coding chr10:127512131 chr10:127512149 nonsynonymous SNV 0.001 3 39 hm5C_associated_SNPs_23275 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:127512140-127512160
64251 chr17 1747901 1747901 1 + C T HNSC 1747884 + 1747864 1747904 41 GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTCTCG GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTTTCG < 41bp 1 0.587113998255689 1 0.174499571323395 experiment 0.825772003488623 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1747884 chr17:1747901 nonsynonymous SNV 0.071 4 38 hm5C_associated_SNPs_23276 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1747869-1747959
64251 chr1 154313342 154313342 1 + C T HNSC 154313339 + 154313319 154313359 41 CCCCTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTA CCCCTGTGCAGTGTGGAGGTCATTCGTCTGGGCCACAGCTA < 41bp 1 0.0674258227270008 1 0.0260657668113708 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313339 chr1:154313342 synonymous SNV . 0 24 hm5C_associated_SNPs_23277 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr14 96998720 96998720 1 + C T HNSC 96998728 + 96998708 96998748 41 CATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTAT CATTGACAACTTTAGGTTAACTCTGAGAGCTATCAAACTAT < 41bp 1 0.507098067711416 1 0.0590348541736603 experiment 0.985803864577169 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96998728 chr14:96998720 synonymous SNV . 0 13 hm5C_associated_SNPs_23278 0 0 23 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:96998680-96998720
64251 chr8 48885504 48885504 1 + G C HNSC 48885502 + 48885482 48885522 41 ACCTGGTCGCACTGTACTACCAGAGCGAGGAGCAGGCAGAG ACCTGGTCGCACTGTACTACCACAGCGAGGAGCAGGCAGAG < 41bp 1 0.686983342341811 1 0.095167487859726 experiment 0.626033315316379 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48885502 chr8:48885504 nonsynonymous SNV 0.966 2 23 hm5C_associated_SNPs_23281 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48885468-48885565
64251 chr1 168014240 168014240 1 + C T HNSC 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTTATCT < 41bp 1 0.362385612841847 1 0.466508567333221 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014240 nonsynonymous SNV 0.024 0 37 hm5C_associated_SNPs_23282 0 0 5 GRWD1 POSTAR2 ENCODE chr1:168014221-168014295
64251 chr10 75525644 75525644 1 + G T HNSC 75525655 + 75525635 75525675 41 GGCTCTTATGAATTCTTGGCCACTGTAGATTACTGCAAGGT GGCTCTTATTAATTCTTGGCCACTGTAGATTACTGCAAGGT < 41bp 1 0.21538758359059 1 0.10268434882164 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75525655 chr10:75525644 stopgain 1.000 1 10 hm5C_associated_SNPs_23283 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:75525616-75525652
64251 chr11 65268905 65268905 1 + G A HNSC 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGACTGGTA < 41bp 1 0.160071083870379 1 0.433852910995483 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268905 . . 0 35 hm5C_associated_SNPs_23289 0 0 107 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268900-65268920
64251 chr10 98744493 98744493 1 + G A HNSC 98744477 + 98744457 98744497 41 GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCATGCTGATGG GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCATGCTAATGG < 41bp 1 0.517062609160152 1 0.437629073858261 experiment 0.965874781679696 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LCOR ENSG00000155640 CDS Human other chr10:98744477 chr10:98744493 nonsynonymous SNV 0.046 1 37 hm5C_associated_SNPs_23290 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:98744486-98744522
64251 chr10 12191690 12191690 1 + C T HNSC 12191687 + 12191667 12191707 41 AATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT AATCATTGAAGTTGGAGATACACTGAAAGATAGAGCTTTAT < 41bp 1 0.30631299639295 1 0.0715384483337402 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191687 chr10:12191690 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_23291 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:12191667-12191691
64251 chr12 98995265 98995265 1 + A T HNSC 98995269 + 98995249 98995289 41 CCCTCCTCCACCCGAGATGCCAGAGTCTCTGAAGAAGAAGC CCCTCCTCCACCCGAGTTGCCAGAGTCTCTGAAGAAGAAGC < 41bp 1 0.613436159599315 1 0.563885092735291 experiment 0.773127680801369 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995269 chr12:98995265 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_23292 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr7 128407640 128407640 1 + C T HNSC 128407641 + 128407621 128407661 41 AAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCAT AAGAGACCAAAGACTGGATTCTTCCCTCAGACTATGATCAT < 41bp 1 0.195407061153699 1 0.0385686755180359 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407641 chr7:128407640 synonymous SNV . 0 20 hm5C_associated_SNPs_23293 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr7 128407640 128407640 1 + C T HNSC 128407644 + 128407624 128407664 41 AGACCAAAGACTGGATCCTTCCCTCAGACTATGATCATGCA AGACCAAAGACTGGATTCTTCCCTCAGACTATGATCATGCA < 41bp 1 0.146279453834625 1 0.22507432103157 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407644 chr7:128407640 synonymous SNV . 0 17 hm5C_associated_SNPs_23294 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr1 249210815 249210815 1 + G A HNSC 249210825 + 249210805 249210845 41 GTCATTGCTGGGAGAGGTATCCACTCAAAGGTGAAGTCTGC GTCATTGCTGAGAGAGGTATCCACTCAAAGGTGAAGTCTGC < 41bp 1 0.185693966868236 1 0.245109289884567 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249210825 chr1:249210815 nonsynonymous SNV 0.002 0 11 hm5C_associated_SNPs_23295 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:249210800-249210820
64251 chr14 102502959 102502959 1 + G A HNSC 102502965 + 102502945 102502985 41 GTGCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGT GTGCACTGAGATTCAGTAACCCCCTTCTGGTCCAGGTTGGT < 41bp 1 0.0371480911024584 1 0.0274159908294678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502965 chr14:102502959 nonsynonymous SNV 0.050 4 15 hm5C_associated_SNPs_23297 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr14 102502959 102502959 1 + G A HNSC 102502967 + 102502947 102502987 41 GCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGTGT GCACTGAGATTCAGTAACCCCCTTCTGGTCCAGGTTGGTGT < 41bp 1 0.00807271974962705 1 0.0250576138496399 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502967 chr14:102502959 nonsynonymous SNV 0.050 4 13 hm5C_associated_SNPs_23298 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr1 161130737 161130737 1 + C T HNSC 161130757 + 161130737 161130777 41 CCATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAG TCATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAG < 41bp 1 0.0925537334051096 1 0.112877786159515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130757 chr1:161130737 nonsynonymous SNV 0.997 0 1 hm5C_associated_SNPs_23305 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:161130722-161130755
64251 chr11 61897977 61897977 1 + C T HNSC 61897996 + 61897976 61898016 41 CCAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTT CTAAACAGGAAAGTGTTGTCCGCAGGGCGAGCAGAAGGCTT < 41bp 1 0.531207612142431 1 0.559327065944672 experiment 0.937584775715138 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897996 chr11:61897977 synonymous SNV . 0 2 hm5C_associated_SNPs_23312 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr11:61897962-61897983
64251 chr1 228879196 228879196 1 + G T HNSC 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCATTC < 41bp 1 0.112955274732982 1 0.100091755390167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879196 nonsynonymous SNV 0.847 3 39 hm5C_associated_SNPs_23313 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:228879180-228879200
64251 chr3 49050668 49050668 1 + C G HNSC 49050657 + 49050637 49050677 41 TGGGCCCAGTGTCTACCCTGCCCTCTCTGCACGGGAAGCAG TGGGCCCAGTGTCTACCCTGCCCTCTCTGCAGGGGAAGCAG < 41bp 1 0.0328388096868524 1 0.014741450548172 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050657 chr3:49050668 nonsynonymous SNV 0.997 4 32 hm5C_associated_SNPs_23314 0 0 37 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:49050600-49050680
64251 chr16 70575702 70575702 1 + G A HNSC 70575721 + 70575701 70575741 41 TGAGTTGGACAGCCTCTCTCCCATTCTGTTTTGCCAGGTTG TAAGTTGGACAGCCTCTCTCCCATTCTGTTTTGCCAGGTTG < 41bp 1 0.0309589560716515 1 0.0712500214576721 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70575721 chr16:70575702 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_23315 0 0 20 ZC3H7B POSTAR2 GSE38201,GSM936510 chr16:70575673-70575704
64251 chr9 108377582 108377582 1 + G A HNSC 108377587 + 108377567 108377607 41 TGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTG TGATGATAACACTGTAGAAGCTGTGGCCTTTCGGAAGAGTG < 41bp 1 0.260881809737653 1 0.14705491065979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FKTN ENSG00000106692 CDS Human protein_coding chr9:108377587 chr9:108377582 synonymous SNV . 0 16 hm5C_associated_SNPs_23316 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:108377576-108377607
64251 chr16 68104954 68104954 1 + C G HNSC 68104973 + 68104953 68104993 41 TCTTCCTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG TGTTCCTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG < 41bp 1 0.197199004356714 1 0.427280247211456 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104973 chr16:68104954 nonsynonymous SNV 0.989 2 2 hm5C_associated_SNPs_23317 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:68104931-68104963
64251 chr1 82372826 82372826 1 + G T HNSC 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTATGGTCGTACGGATGACAAGATTTGT < 41bp 1 0.0919246819370884 1 0.136998176574707 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372826 synonymous SNV . 0 23 hm5C_associated_SNPs_23318 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr2 160605112 160605112 1 + G C HNSC 160605129 + 160605109 160605149 41 ACAGAATGATCCTCTTGGAGCTGCTGCCAACAGACCACAAG ACACAATGATCCTCTTGGAGCTGCTGCCAACAGACCACAAG < 41bp 1 0.628595752734419 1 0.119097709655762 experiment 0.742808494531161 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160605129 chr2:160605112 nonsynonymous SNV 0.939 2 4 hm5C_associated_SNPs_23319 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:160605092-160605146
64251 chr20 37078059 37078059 1 + A G HNSC 37078042 + 37078022 37078062 41 CAAAAATGATCACGGGCTGCCTGTGCTCTGGTCATCAATAA CAAAAATGATCACGGGCTGCCTGTGCTCTGGTCATCAGTAA < 41bp 1 0.357369562661363 1 0.366188436746597 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078042 chr20:37078059 . . 0 38 hm5C_associated_SNPs_23320 0 0 18 METTL14 POSTAR2 GSE46705,GSM1135009 chr20:37078040-37078060
64251 chr20 37078059 37078059 1 + A G HNSC 37078054 + 37078034 37078074 41 CGGGCTGCCTGTGCTCTGGTCATCAATAACGCAGGGAGAGG CGGGCTGCCTGTGCTCTGGTCATCAGTAACGCAGGGAGAGG < 41bp 1 0.328138506433881 1 0.0491955578327179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078054 chr20:37078059 . . 0 26 hm5C_associated_SNPs_23321 0 0 18 METTL14 POSTAR2 GSE46705,GSM1135009 chr20:37078040-37078060
64251 chr17 72764743 72764743 1 + G A HNSC 72764746 + 72764726 72764766 41 GAAACGCAGCAGCAAACGGGCCCCGCAGATGGACTGGAGCA GAAACGCAGCAGCAAACAGGCCCCGCAGATGGACTGGAGCA < 41bp 1 0.280848609057432 1 0.106983512639999 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764746 chr17:72764743 nonsynonymous SNV 0.998 3 18 hm5C_associated_SNPs_23322 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:72764737-72764768
64251 chr13 76393647 76393647 1 + C T HNSC 76393641 + 76393621 76393661 41 TGAGAAGTCTAAGAGAAGCTCTAAGACGTTTAAGGAAATGC TGAGAAGTCTAAGAGAAGCTCTAAGATGTTTAAGGAAATGC < 41bp 1 0.334199684724297 1 0.195094674825668 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76393641 chr13:76393647 nonsynonymous SNV 0.989 4 27 hm5C_associated_SNPs_23323 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr13:76393641-76393662
64251 chr12 82752438 82752438 1 + T A HNSC 82752435 + 82752415 82752455 41 TGCAGTTCCTGAGGGATGCCCTGTCCATTTCCAATGCACAT TGCAGTTCCTGAGGGATGCCCTGACCATTTCCAATGCACAT < 41bp 1 0.362033809220089 1 0.106695652008057 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752435 chr12:82752438 nonsynonymous SNV 0.413 0 24 hm5C_associated_SNPs_23325 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:82752417-82752443
64251 chr6 43096998 43096998 1 + C T HNSC 43096986 + 43096966 43097006 41 GAAGCCCGCAGTGCCAACGCCTCCTTCAACATCAAATGTGA GAAGCCCGCAGTGCCAACGCCTCCTTCAACATTAAATGTGA < 41bp 1 0.172811435163159 1 0.769067049026489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096986 chr6:43096998 synonymous SNV . 0 33 hm5C_associated_SNPs_23326 0 0 3 GRWD1 POSTAR2 ENCODE chr6:43096986-43097032
64251 chr12 53854798 53854798 1 + G A HNSC 53854793 + 53854773 53854813 41 ATTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAG ATTTTGAATTTCTTTTTACTCCAAAAAGTACAGGGGCTCAG < 41bp 1 0.333056951297944 1 0.332018792629242 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCBP2 ENSG00000197111 splicing Human protein_coding chr12:53854793 chr12:53854798 . 0.998 0 26 hm5C_associated_SNPs_23329 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr12:53854776-53854798
64251 chr12 53854798 53854798 1 + G A HNSC 53854794 + 53854774 53854814 41 TTTTGAATTTCTTTTTACTCCAAAGAGTACAGGGGCTCAGG TTTTGAATTTCTTTTTACTCCAAAAAGTACAGGGGCTCAGG < 41bp 1 0.314306858724113 1 0.271703153848648 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCBP2 ENSG00000197111 splicing Human protein_coding chr12:53854794 chr12:53854798 . 0.998 0 25 hm5C_associated_SNPs_23330 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr12:53854776-53854798
64251 chr16 85687969 85687969 1 + C T HNSC 85687966 + 85687946 85687986 41 TCAGGAGAAGGCAGGGGGACCAGCCATCCCCTCGCACCTGC TCAGGAGAAGGCAGGGGGACCAGTCATCCCCTCGCACCTGC < 41bp 1 0.341751225580333 1 0.321201056241989 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85687966 chr16:85687969 nonsynonymous SNV 0.932 1 24 hm5C_associated_SNPs_23333 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:85687956-85687979
64251 chr12 57604642 57604642 1 + T C HNSC 57604652 + 57604632 57604672 41 CCCGGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC CCCGGCTTCCCGGGCGACCGCTGCCAGTACCGTGAGTGAGC < 41bp 1 0.165460235894903 1 0.276858448982239 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604652 chr12:57604642 nonsynonymous SNV 0.993 0 11 hm5C_associated_SNPs_23334 0 0 2 DDX55 POSTAR2 ENCODE chr12:57604608-57604662
64251 chr16 85687968 85687968 1 + G T HNSC 85687966 + 85687946 85687986 41 TCAGGAGAAGGCAGGGGGACCAGCCATCCCCTCGCACCTGC TCAGGAGAAGGCAGGGGGACCATCCATCCCCTCGCACCTGC < 41bp 1 0.22424216135692 1 0.227503389120102 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85687966 chr16:85687968 nonsynonymous SNV 0.902 1 23 hm5C_associated_SNPs_23335 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:85687956-85687979
64251 chr1 31811836 31811836 1 + C T HNSC 31811833 + 31811813 31811853 41 GATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCA GATAGAATAAAAGTATCCCTCTCTATGAAGGTTGTCAATCA < 41bp 1 0.590780884676064 1 0.944318413734436 experiment 0.818438230647871 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC17 ENSG00000121766 CDS Human protein_coding chr1:31811833 chr1:31811836 synonymous SNV . 0 24 hm5C_associated_SNPs_23336 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:31811813-31811842
64251 chr3 183885461 183885461 1 + G T HNSC 183885453 + 183885433 183885473 41 CCTGAATCAGGGTTGGAGGTCCGTGACCGCATGTGGCTCAA CCTGAATCAGGGTTGGAGGTCCGTGACCTCATGTGGCTCAA < 41bp 1 0.248155893575506 1 0.274539232254028 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885453 chr3:183885461 nonsynonymous SNV 0.999 4 29 hm5C_associated_SNPs_23337 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:183885436-183885474
64251 chr5 154179521 154179521 1 + G T HNSC 154179534 + 154179514 154179554 41 AGGGCCTGTCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC AGGGCCTTTCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC < 41bp 1 0.231566861602933 1 0.142346143722534 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179534 chr5:154179521 synonymous SNV . 0 8 hm5C_associated_SNPs_23338 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:154179503-154179524
64251 chr17 64785040 64785040 1 + G A HNSC 64785043 + 64785023 64785063 41 CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAA CATGCCTTCTTCCGGAGAATCGACTGGGAAAAACTGGAGAA < 41bp 1 0.400296379333093 1 0.429358661174774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785043 chr17:64785040 synonymous SNV . 0 18 hm5C_associated_SNPs_23339 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr17 64785040 64785040 1 + G A HNSC 64785046 + 64785026 64785066 41 GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAG GCCTTCTTCCGGAGAATCGACTGGGAAAAACTGGAGAACAG < 41bp 1 0.602193719894929 1 0.482806235551834 experiment 0.795612560210142 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785046 chr17:64785040 synonymous SNV . 0 15 hm5C_associated_SNPs_23340 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr2 86947840 86947840 1 + A T HNSC 86947846 + 86947826 86947866 41 GAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGCTGTGCG GAAGGTGCTGCACATGTTCTCAGGCTACGGGCAGCTGTGCG < 41bp 1 0.760045485434363 1 0.940584421157837 experiment 0.479909029131274 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RMND5A ENSG00000153561 CDS Human protein_coding chr2:86947846 chr2:86947840 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_23343 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:86947827-86947847
64251 chr2 101622470 101622470 1 + G A HNSC 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGAATG < 41bp 1 0.738416974570882 1 0.576389789581299 experiment 0.523166050858236 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622470 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_23345 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101622418-101622470
64251 chr2 101622470 101622470 1 + G A HNSC 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATGAGAATGAAGATTCA < 41bp 1 0.715365952934077 1 0.394184738397598 experiment 0.569268094131846 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622470 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_23346 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101622418-101622470
64251 chr5 110097165 110097165 1 + T C HNSC 110097160 + 110097140 110097180 41 TGTGCAGAGTATGTTGGATGCTTATTTTCCAGAACTTATTG TGTGCAGAGTATGTTGGATGCTTATCTTCCAGAACTTATTG < 41bp 1 0.245631017532838 1 0.0609715282917023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097160 chr5:110097165 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_23347 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr14 103802212 103802212 1 + C G HNSC 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TGAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG < 41bp 1 0.175960401397421 1 0.0521022379398346 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802212 synonymous SNV . 0 2 hm5C_associated_SNPs_23348 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr1 120283058 120283058 1 + G A HNSC 120283038 + 120283018 120283058 41 CAGGCCCTTACCAGTGCCTTCTCTCCACACACCAAGCCTTG CAGGCCCTTACCAGTGCCTTCTCTCCACACACCAAGCCTTA < 41bp 1 0.11746517598488 1 0.452867269515991 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120283038 chr1:120283058 stopgain 1.000 1 41 hm5C_associated_SNPs_23349 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:120283020-120283060
64251 chr1 228401943 228401943 1 + G A HNSC 228401926 + 228401906 228401946 41 GGCGGTGCGCGTGGGCGACACGGCTATGTTTTGCGTGGAGC GGCGGTGCGCGTGGGCGACACGGCTATGTTTTGCGTGAAGC < 41bp 1 0.185456347694808 1 0.593474328517914 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228401926 chr1:228401943 nonsynonymous SNV 0.866 3 38 hm5C_associated_SNPs_23350 0 0 2 RBM15 POSTAR2 ENCODE chr1:228401931-228401994
64251 chr12 53664573 53664573 1 + G A HNSC 53664581 + 53664561 53664601 41 ACGGACCACATGGGGATGACCGGTTAGTGCCCTGGGTCCCA ACGGACCACATGAGGATGACCGGTTAGTGCCCTGGGTCCCA < 41bp 1 0.250324729406655 1 0.665262222290039 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53664581 chr12:53664573 nonsynonymous SNV 0.983 0 13 hm5C_associated_SNPs_23351 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53664502-53664592
64251 chr15 99672296 99672296 1 + G A HNSC 99672281 + 99672261 99672301 41 GGAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGGGAAGG GGAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGAGAAGG < 41bp 1 0.00720948408149886 1 0.0517691075801849 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99672281 chr15:99672296 nonsynonymous SNV 0.009 0 36 hm5C_associated_SNPs_23352 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:99672290-99672304
64251 chr15 99672296 99672296 1 + G A HNSC 99672282 + 99672262 99672302 41 GAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGGGAAGGT GAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGAGAAGGT < 41bp 1 0.00757329910523368 1 0.169800847768784 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99672282 chr15:99672296 nonsynonymous SNV 0.009 0 35 hm5C_associated_SNPs_23353 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:99672290-99672304
64251 chr16 2569563 2569563 1 + C T HNSC 2569545 + 2569525 2569565 41 TCTCTTCTCGCCCCCAGGAGCTTCCTCCAGCTGGGCGCCGG TCTCTTCTCGCCCCCAGGAGCTTCCTCCAGCTGGGCGCTGG < 41bp 1 0.227401318629868 1 0.0377614498138428 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569545 chr16:2569563 synonymous SNV . 0 39 hm5C_associated_SNPs_23354 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2569543-2569569
64251 chr11 65402557 65402557 1 + C T HNSC 65402544 + 65402524 65402564 41 TTGCCGACATGGACCTGCTTCACCGCGTTGTGGCGCCTGGG TTGCCGACATGGACCTGCTTCACCGCGTTGTGGTGCCTGGG < 41bp 1 0.253064864232948 1 0.109040290117264 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402544 chr11:65402557 nonsynonymous SNV 0.127 1 34 hm5C_associated_SNPs_23358 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65402556-65402582
64251 chr19 5691333 5691333 1 + C G HNSC 5691353 + 5691333 5691373 41 CTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGA GTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGA < 41bp 1 0.419725793468961 1 0.390615403652191 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691353 chr19:5691333 nonsynonymous SNV 0.508 0 1 hm5C_associated_SNPs_23359 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5691320-5691360
64251 chr7 44801094 44801094 1 + T C HNSC 44801091 + 44801071 44801111 41 CGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAGCC CGGCTGACCTTCCCTGTGCGCGACGGGGTGGTCCTGGAGCC < 41bp 1 0.578175691716852 1 0.640409529209137 experiment 0.843648616566296 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801091 chr7:44801094 synonymous SNV . 0 24 hm5C_associated_SNPs_23361 0 0 6 DDX24 POSTAR2 ENCODE chr7:44801047-44801117
64251 chr8 145151332 145151332 1 + T C HNSC 145151319 + 145151299 145151339 41 GTTCGACTATTTCCCAAAACCATACCCCAACAGTGAGGCTG GTTCGACTATTTCCCAAAACCATACCCCAACAGCGAGGCTG < 41bp 1 0.16658855971989 1 0.0430470407009125 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151319 chr8:145151332 synonymous SNV . 0 34 hm5C_associated_SNPs_23362 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145151303-145151333
64251 chr3 183369021 183369021 1 + A G HNSC 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATGAAGCAAGACGGTACCACGTACTTGGGAATGAAATGAT < 41bp 1 0.13138443391305 1 0.222517848014832 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369021 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_23363 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr3:183369014-183369033
64251 chr16 30096327 30096327 1 + C T HNSC 30096347 + 30096327 30096367 41 CCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC TCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC < 41bp 1 0.321934975065975 1 0.118390947580338 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096347 chr16:30096327 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_23364 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30096210-30096333
64251 chr8 98657027 98657027 1 + C T HNSC 98657015 + 98656995 98657035 41 CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCG CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGTGGCCCCCG < 41bp 1 0.568767910594769 1 0.560298323631287 experiment 0.862464178810461 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657015 chr8:98657027 nonsynonymous SNV 0.002 0 33 hm5C_associated_SNPs_23365 0 0 7 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr8 98657027 98657027 1 + C T HNSC 98657016 + 98656996 98657036 41 AAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGA AAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGTGGCCCCCGA < 41bp 1 0.795887503648337 1 0.884409308433533 experiment 0.408224992703327 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657016 chr8:98657027 nonsynonymous SNV 0.002 0 32 hm5C_associated_SNPs_23366 0 0 7 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr8 98657027 98657027 1 + C T HNSC 98657024 + 98657004 98657044 41 GGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGG GGAGGCGGCGGCCGTGCCGGCCGTGGCCCCCGACGACCTGG < 41bp 1 0.621796205758056 1 0.498929679393768 experiment 0.756407588483888 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657024 chr8:98657027 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_23367 0 0 7 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr8 98657027 98657027 1 + C T HNSC 98657025 + 98657005 98657045 41 GAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGC GAGGCGGCGGCCGTGCCGGCCGTGGCCCCCGACGACCTGGC < 41bp 1 0.668710467400798 1 0.661360144615173 experiment 0.662579065198405 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657025 chr8:98657027 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_23368 0 0 7 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chrX 107925107 107925107 1 + A T HNSC 107925116 + 107925096 107925136 41 CCAAGGACCTCAAGGCTTACCAGGTACCAATGCAGATCATC CCAAGGACCTCTAGGCTTACCAGGTACCAATGCAGATCATC < 41bp 1 0.303994465565013 1 0.833474636077881 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107925116 chrX:107925107 nonsynonymous SNV 0.990 2 12 hm5C_associated_SNPs_23369 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:107925081-107925107
64251 chr2 47205965 47205965 1 + G A HNSC 47205958 + 47205938 47205978 41 ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT ATAACAGCACGTCGAGGCATCTGAAAGACTGTCACCCGCTT < 41bp 1 0.552423482692349 1 0.810165584087372 experiment 0.895153034615301 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47205958 chr2:47205965 nonsynonymous SNV 0.876 2 28 hm5C_associated_SNPs_23371 0 0 2 PPIG POSTAR2 ENCODE chr2:47205961-47206048
64251 chr12 53663740 53663740 1 + G A HNSC 53663747 + 53663727 53663767 41 GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCTG GGGCATTGTATGAAAGCTGCCAGTTCTTCCTTTCAGGCCTG < 41bp 1 0.154654303324212 1 0.299002110958099 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663747 chr12:53663740 synonymous SNV . 0 14 hm5C_associated_SNPs_23372 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:53663720-53663740
64251 chr14 70235548 70235548 1 + A G HNSC 70235528 + 70235508 70235548 41 TTTGTAGGGTTACTATTGAACATGCTAGGGCTCGGTCACGA TTTGTAGGGTTACTATTGAACATGCTAGGGCTCGGTCACGG < 41bp 1 0.448512153750625 1 0.224020153284073 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235528 chr14:70235548 synonymous SNV . 0 41 hm5C_associated_SNPs_23374 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:70235486-70235599
64251 chr14 70235548 70235548 1 + A G HNSC 70235540 + 70235520 70235560 41 CTATTGAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGT CTATTGAACATGCTAGGGCTCGGTCACGGGGTGGAAGAGGT < 41bp 1 0.180855820223406 1 0.278237223625183 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235540 chr14:70235548 synonymous SNV . 0 29 hm5C_associated_SNPs_23375 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:70235486-70235599
64251 chr19 39898771 39898771 1 + G A HNSC 39898755 + 39898735 39898775 41 TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCAC TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCACCAC < 41bp 1 0.745032217375781 1 0.106426656246185 experiment 0.509935565248439 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898755 chr19:39898771 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_23376 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39898744-39898790
64251 chr6 4935984 4935984 1 + G A HNSC 4935980 + 4935960 4936000 41 CTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATC CTTGTTATCCACAAAGTCCTCAGAAAATAACTCACTAAATC < 41bp 1 0.764844895314069 1 0.731609702110291 experiment 0.470310209371862 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935980 chr6:4935984 synonymous SNV . 0 25 hm5C_associated_SNPs_23377 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:4935947-4936001
64251 chr16 67917557 67917557 1 + G A HNSC 67917568 + 67917548 67917588 41 ACCCTGCCCGCTCTCCCAGCCTGTGCTCCTTTCCCTCATCC ACCCTGCCCACTCTCCCAGCCTGTGCTCCTTTCCCTCATCC < 41bp 1 0.270834933051518 1 0.0825860798358917 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917568 chr16:67917557 synonymous SNV . 0 10 hm5C_associated_SNPs_23378 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67917519-67917564
64251 chr9 33917126 33917126 1 + C G HNSC 33917142 + 33917122 33917162 41 AGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT AGCTGAGATTTGCTTTACGACGACTTGTATGATGACGACAT < 41bp 1 0.381463674232653 1 0.0516506731510162 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917142 chr9:33917126 stopgain 1.000 1 5 hm5C_associated_SNPs_23379 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917126 33917126 1 + C G HNSC 33917145 + 33917125 33917165 41 TCAGATTTGCTTTACGACGACTTGTATGATGACGACATTGA TGAGATTTGCTTTACGACGACTTGTATGATGACGACATTGA < 41bp 1 0.148809727167106 1 0.0630845725536346 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917145 chr9:33917126 stopgain 1.000 1 2 hm5C_associated_SNPs_23380 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr5 36985988 36985988 1 + A G HNSC 36986004 + 36985984 36986024 41 ATAAATCAAGATCTGATAAACTTGGTTTTAAATCACCAACT ATAAGTCAAGATCTGATAAACTTGGTTTTAAATCACCAACT < 41bp 1 0.342399943344773 1 0.124453574419022 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36986004 chr5:36985988 synonymous SNV . 0 5 hm5C_associated_SNPs_23381 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:36985966-36985993
64251 chr3 30713559 30713559 1 + C G HNSC 30713566 + 30713546 30713586 41 AAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACAT AAGGACATCTTCTGAGACATCAATCTGAAGCATGAGAACAT < 41bp 1 0.136052691223881 1 0.0492409765720367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713566 chr3:30713559 stopgain 0.996 1 14 hm5C_associated_SNPs_23385 0 0 1 RBM15 POSTAR2 ENCODE chr3:30713494-30713564
64251 chr6 158449877 158449877 1 + A G HNSC 158449888 + 158449868 158449908 41 ATCACTGCCACTGACTTTTACCCTCTTCAGGAAGAGGCCAA ATCACTGCCGCTGACTTTTACCCTCTTCAGGAAGAGGCCAA < 41bp 1 0.061037416471311 1 0.0554773807525635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158449888 chr6:158449877 nonsynonymous SNV 0.122 0 10 hm5C_associated_SNPs_23386 0 0 3 DDX3X POSTAR2 ENCODE chr6:158449873-158449928
64251 chr10 103912172 103912172 1 + C T HNSC 103912153 + 103912133 103912173 41 CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGATGGCG CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGATGGTG < 41bp 1 0.384562089037716 1 0.0353205800056458 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912153 chr10:103912172 nonsynonymous SNV 0.996 4 40 hm5C_associated_SNPs_23387 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:103912122-103912178
64251 chr17 8172074 8172074 1 + C T HNSC 8172060 + 8172040 8172080 41 GCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCT GCCTTCTGCTACGCCACAACCTGTCTGGGCGCTATGAGTCT < 41bp 1 0.293101940729301 1 0.116841375827789 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172060 chr17:8172074 synonymous SNV . 0 35 hm5C_associated_SNPs_23388 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8172060-8172080
64251 chr11 85977185 85977185 1 + T C HNSC 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTCTTAAACTTCGGAGGATCAATTCAAAGAGAATGATGAA < 41bp 1 0.166450851904556 1 0.141456812620163 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977185 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_23389 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:85977184-85977209
64251 chr16 81077197 81077197 1 + G C HNSC 81077198 + 81077178 81077218 41 GCTTGCTCTCTTAAGGAGAGCCTACCTCTTTTCAAAATTGC GCTTGCTCTCTTAAGGAGACCCTACCTCTTTTCAAAATTGC < 41bp 1 0.0163269489885052 1 0.0514872670173645 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077198 chr16:81077197 nonsynonymous SNV 0.087 0 20 hm5C_associated_SNPs_23390 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:81077149-81077216
64251 chr11 65268685 65268685 1 + A G HNSC 65268671 + 65268651 65268691 41 TGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTC TGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGGGTTTTC < 41bp 1 0.713781708797849 1 0.394006162881851 experiment 0.572436582404302 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268671 chr11:65268685 . . 0 35 hm5C_associated_SNPs_23391 0 0 77 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268680-65268760
64251 chr9 35733425 35733425 1 + G A HNSC 35733405 + 35733385 35733425 41 TACCCTAGGAGATTGCTAGGCTAGTACTGACAGATGAGGAG TACCCTAGGAGATTGCTAGGCTAGTACTGACAGATGAGGAA < 41bp 1 0.322406465480865 1 0.147081583738327 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733405 chr9:35733425 synonymous SNV . 0 41 hm5C_associated_SNPs_23392 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:35733396-35733426
64251 chr9 35733425 35733425 1 + G A HNSC 35733411 + 35733391 35733431 41 AGGAGATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGT AGGAGATTGCTAGGCTAGTACTGACAGATGAGGAAAAGAGT < 41bp 1 0.157048717519844 1 0.458234697580338 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733411 chr9:35733425 synonymous SNV . 0 35 hm5C_associated_SNPs_23393 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:35733396-35733426
64251 chr9 35733425 35733425 1 + G A HNSC 35733415 + 35733395 35733435 41 GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTAT GATTGCTAGGCTAGTACTGACAGATGAGGAAAAGAGTCTAT < 41bp 1 0.405195837118633 1 0.162561476230621 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733415 chr9:35733425 synonymous SNV . 0 31 hm5C_associated_SNPs_23394 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:35733396-35733426
64251 chr7 2472402 2472402 1 + C T HNSC 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCTGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG < 41bp 1 0.487965014850419 1 0.207891076803207 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472402 nonsynonymous SNV 0.487 2 7 hm5C_associated_SNPs_23395 0 0 1 DDX3X POSTAR2 ENCODE chr7:2472401-2472441
64251 chrX 100880789 100880789 1 + C G HNSC 100880781 + 100880761 100880801 41 GAAACTCCTTTTGAATTTGGCTGAAAATCCAGCCATGACTA GAAACTCCTTTTGAATTTGGCTGAAAATGCAGCCATGACTA < 41bp 1 0.688571776218723 1 0.477179497480392 experiment 0.622856447562554 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880781 chrX:100880789 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_23396 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:100880753-100880797
64251 chrX 100880789 100880789 1 + C G HNSC 100880794 + 100880774 100880814 41 AATTTGGCTGAAAATCCAGCCATGACTAGGGAACTGCTCAG AATTTGGCTGAAAATGCAGCCATGACTAGGGAACTGCTCAG < 41bp 1 0.667455265962135 1 0.150969833135605 experiment 0.66508946807573 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880794 chrX:100880789 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_23397 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:100880753-100880797
64251 chr1 161130531 161130531 1 + G A HNSC 161130542 + 161130522 161130562 41 CCAGGGCCCGCAGCAAGGAGCGCAGAAACCCAGCCTCTGGG CCAGGGCCCACAGCAAGGAGCGCAGAAACCCAGCCTCTGGG < 41bp 1 0.516006693702085 1 0.466773360967636 experiment 0.96798661259583 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130542 chr1:161130531 nonsynonymous SNV 0.998 2 10 hm5C_associated_SNPs_23398 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130513-161130558
64251 chr14 105355926 105355926 1 + C T HNSC 105355938 + 105355918 105355958 41 ACGGCTCCCCCAAACACACACGCTCCCACACCTCAACAGCC ACGGCTCCTCCAAACACACACGCTCCCACACCTCAACAGCC < 41bp 1 0.0372251676862084 1 0.160391509532928 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105355938 chr14:105355926 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_23399 0 0 1 FBL POSTAR2 GSE43666,GSM1067864 chr14:105355921-105355942
64251 chr3 128631364 128631364 1 + C G HNSC 128631356 + 128631336 128631376 41 CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATGAGCAGA CTTTTCCTTCCCAGATGCTCCAGAAAACGTAGATGAGCAGA < 41bp 1 0.544700978128268 1 0.539043545722961 experiment 0.910598043743463 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128631356 chr3:128631364 nonsynonymous SNV 0.995 1 29 hm5C_associated_SNPs_23400 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128631362-128631394
64251 chr20 57246299 57246299 1 + C T HNSC 57246308 + 57246288 57246328 41 ATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA ATTGTACAGTCTATTTCTGACCTGAATGAAATATTCAGGGA < 41bp 1 0.401685687444916 1 0.184350699186325 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control STX16 ENSG00000124222;ENSG00000254995 CDS Human other chr20:57246308 chr20:57246299 synonymous SNV . 0 12 hm5C_associated_SNPs_23402 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:57246214-57246301
64251 chr5 137735605 137735605 1 + G A HNSC 137735614 + 137735594 137735634 41 GTGATGTGTGTGAAACAACTCTCTTCAACATCCACTGGGTT GTGATGTGTGTAAAACAACTCTCTTCAACATCCACTGGGTT < 41bp 1 0.0936673256741547 1 0.058974951505661 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137735614 chr5:137735605 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_23403 0 0 19 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137735562-137735605
64251 chr17 73564865 73564865 1 + G C HNSC 73564860 + 73564840 73564880 41 TCTCTTTTTCTAGGAGTGGCCAATTGATGGTGGCACCAGCC TCTCTTTTTCTAGGAGTGGCCAATTCATGGTGGCACCAGCC < 41bp 1 0.0638271862355193 1 0.488553166389465 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73564860 chr17:73564865 nonsynonymous SNV 0.709 3 26 hm5C_associated_SNPs_23404 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:73564864-73564886
64251 chr15 63481934 63481934 1 + C T HNSC 63481916 + 63481896 63481936 41 CTGTTCCGCTTCTCAGAGGACGCCTTCAACACCACCTTCAT CTGTTCCGCTTCTCAGAGGACGCCTTCAACACCACCTTTAT < 41bp 1 0.570976887214416 1 0.143310725688934 experiment 0.858046225571168 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB8B ENSG00000166128 CDS Human protein_coding chr15:63481916 chr15:63481934 synonymous SNV . 0 39 hm5C_associated_SNPs_23405 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:63481917-63481947
64251 chr1 109643008 109643008 1 + G A HNSC 109642989 + 109642969 109643009 41 CGCCCCTCCTCCCGCTTACACTTTGATCTTATTTGATCGGA CGCCCCTCCTCCCGCTTACACTTTGATCTTATTTGATCGAA < 41bp 1 0.249340083674405 1 0.0526989102363586 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642989 chr1:109643008 . . 0 40 hm5C_associated_SNPs_23406 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109642996 + 109642976 109643016 41 CCTCCCGCTTACACTTTGATCTTATTTGATCGGATCGTGAC CCTCCCGCTTACACTTTGATCTTATTTGATCGAATCGTGAC < 41bp 1 0.239366218554663 1 0.0308262407779694 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642996 chr1:109643008 . . 0 33 hm5C_associated_SNPs_23407 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643006 + 109642986 109643026 41 ACACTTTGATCTTATTTGATCGGATCGTGACCCCAGCCCCG ACACTTTGATCTTATTTGATCGAATCGTGACCCCAGCCCCG < 41bp 1 0.390534008499263 1 0.335484355688095 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643006 chr1:109643008 . . 0 23 hm5C_associated_SNPs_23408 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643011 + 109642991 109643031 41 TTGATCTTATTTGATCGGATCGTGACCCCAGCCCCGCCGGG TTGATCTTATTTGATCGAATCGTGACCCCAGCCCCGCCGGG < 41bp 1 0.629698890483315 1 0.539161145687103 experiment 0.74060221903337 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643011 chr1:109643008 . . 0 18 hm5C_associated_SNPs_23409 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643018 + 109642998 109643038 41 TATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCC TATTTGATCGAATCGTGACCCCAGCCCCGCCGGGCCGACCC < 41bp 1 0.342390707251742 1 0.503829181194305 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643018 chr1:109643008 . . 0 11 hm5C_associated_SNPs_23410 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643019 + 109642999 109643039 41 ATTTGATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCG ATTTGATCGAATCGTGACCCCAGCCCCGCCGGGCCGACCCG < 41bp 1 0.562651814670758 1 0.313721239566803 experiment 0.874696370658484 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643019 chr1:109643008 . . 0 10 hm5C_associated_SNPs_23411 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643023 + 109643003 109643043 41 GATCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAAT GATCGAATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAAT < 41bp 1 0.337972319653799 1 0.158858478069305 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643023 chr1:109643008 . . 0 6 hm5C_associated_SNPs_23412 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643025 + 109643005 109643045 41 TCGGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGA TCGAATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGA < 41bp 1 0.690950042152631 1 0.491268068552017 experiment 0.618099915694739 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643025 chr1:109643008 . . 0 4 hm5C_associated_SNPs_23413 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643027 + 109643007 109643047 41 GGATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAA GAATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAA < 41bp 1 0.357225090333147 1 0.375453174114227 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643027 chr1:109643008 . . 0 2 hm5C_associated_SNPs_23414 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr1 109643008 109643008 1 + G A HNSC 109643028 + 109643008 109643048 41 GATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAA AATCGTGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAA < 41bp 1 0.566937083442849 1 0.588861763477325 experiment 0.866125833114302 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643028 chr1:109643008 . . 0 1 hm5C_associated_SNPs_23415 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109642981-109643012
64251 chr12 132325377 132325377 1 + G A HNSC 132325361 + 132325341 132325381 41 CACCACACCGCCGGGGACACCCACTTTGACGATGACGAGGC CACCACACCGCCGGGGACACCCACTTTGACGATGACAAGGC < 41bp 1 0.1942027208955 1 0.175704210996628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325361 chr12:132325377 nonsynonymous SNV 0.003 4 37 hm5C_associated_SNPs_23416 0 0 1 DDX24 POSTAR2 ENCODE chr12:132325361-132325402
64251 chr8 30332300 30332300 1 + G C HNSC 30332319 + 30332299 30332339 41 GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT GCACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT < 41bp 1 0.0747154332295687 1 0.0420100092887878 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBPMS ENSG00000157110 CDS Human protein_coding chr8:30332319 chr8:30332300 synonymous SNV . 0 2 hm5C_associated_SNPs_23417 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:30332300-30332320
64251 chr7 5643496 5643496 1 + G C HNSC 5643505 + 5643485 5643525 41 CTGGGACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATC CTGGGACAGGGCACTCAGAGCTCTTCCTCATGAAGCTCATC < 41bp 1 0.104539438639524 1 0.0604011416435242 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643505 chr7:5643496 nonsynonymous SNV 0.252 1 12 hm5C_associated_SNPs_23419 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chr7 5643496 5643496 1 + G C HNSC 5643510 + 5643490 5643530 41 ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG ACAGGGCACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG < 41bp 1 0.324362841963497 1 0.0590589940547943 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643510 chr7:5643496 nonsynonymous SNV 0.252 1 7 hm5C_associated_SNPs_23420 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chr19 18729276 18729276 1 + G C HNSC 18729284 + 18729264 18729304 41 ACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT ACCCTGGTGACCCCGCCTGGCCAGCACCTCAAGTTCCAGGT < 41bp 1 0.190507390078409 1 0.230303764343262 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729284 chr19:18729276 nonsynonymous SNV 0.033 4 13 hm5C_associated_SNPs_23430 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:18729254-18729288
64251 chr1 36028893 36028893 1 + G C HNSC 36028874 + 36028854 36028894 41 GATCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGT GATCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAACT < 41bp 1 0.0574892740992142 1 0.10185369849205 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028874 chr1:36028893 nonsynonymous SNV 0.999 1 40 hm5C_associated_SNPs_23431 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:36028880-36028900
64251 chr1 36028893 36028893 1 + G C HNSC 36028876 + 36028856 36028896 41 TCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGTAT TCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAACTAT < 41bp 1 0.0266134554779177 1 0.0817557573318481 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028876 chr1:36028893 nonsynonymous SNV 0.999 1 38 hm5C_associated_SNPs_23432 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:36028880-36028900
64251 chr17 4797380 4797380 1 + G A HNSC 4797367 + 4797347 4797387 41 ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG ACCCAGCCCCCATACGGGGGCGGCACCATGGTGATCCAGCG < 41bp 1 0.416408810300008 1 0.149186849594116 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797367 chr17:4797380 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_23433 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chrX 150156302 150156302 1 + C T HNSC 150156311 + 150156291 150156331 41 AAAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG AAAGGGTCCTGTTAAAGTTGCCCGGAAAAAGGTGGAAGAGG < 41bp 1 0.442725930698929 1 0.108238399028778 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156311 chrX:150156302 nonsynonymous SNV 0.992 1 12 hm5C_associated_SNPs_23434 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156302 150156302 1 + C T HNSC 150156312 + 150156292 150156332 41 AAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA AAGGGTCCTGTTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA < 41bp 1 0.648866604615123 1 0.52464497089386 experiment 0.702266790769754 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156312 chrX:150156302 nonsynonymous SNV 0.992 1 11 hm5C_associated_SNPs_23435 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156302 150156302 1 + C T HNSC 150156313 + 150156293 150156333 41 AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA AGGGTCCTGTTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA < 41bp 1 0.675385332223843 1 0.59221351146698 experiment 0.649229335552314 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156313 chrX:150156302 nonsynonymous SNV 0.992 1 10 hm5C_associated_SNPs_23436 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chr22 31485785 31485785 1 + T C HNSC 31485804 + 31485784 31485824 41 CTGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC CCGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC < 41bp 1 0.191214899000533 1 0.166716068983078 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMTN ENSG00000183963 CDS Human protein_coding chr22:31485804 chr22:31485785 nonsynonymous SNV 0.810 3 2 hm5C_associated_SNPs_23437 0 0 3 GRWD1 POSTAR2 ENCODE chr22:31485705-31485839
64251 chr1 46739822 46739822 1 + C T HNSC 46739819 + 46739799 46739839 41 TCCCCCTTCAGGTACTTATACGTCCGCCTGGATGGCACGAT TCCCCCTTCAGGTACTTATACGTTCGCCTGGATGGCACGAT < 41bp 1 0.0738481254295178 1 0.0704800486564636 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739819 chr1:46739822 synonymous SNV . 0 24 hm5C_associated_SNPs_23438 0 0 7 FMR1 POSTAR2 ENCODE chr1:46739812-46739850
64251 chr16 31927613 31927613 1 + A T HNSC 31927630 + 31927610 31927650 41 AAGACATACTGGAGAGAGACCCTACAAATGTGATGAATGTG AAGTCATACTGGAGAGAGACCCTACAAATGTGATGAATGTG < 41bp 1 0.0292770842013921 1 0.140246093273163 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927630 chr16:31927613 nonsynonymous SNV 0.120 0 4 hm5C_associated_SNPs_23439 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:31927577-31927633
64251 chr5 908529 908529 1 + C T HNSC 908541 + 908521 908561 41 TCAGATGCCATCCGCGTGGTCAATGCTGTCTTGACCCAAAT TCAGATGCTATCCGCGTGGTCAATGCTGTCTTGACCCAAAT < 41bp 1 0.388444528326143 1 0.218799561262131 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908541 chr5:908529 synonymous SNV . 0 9 hm5C_associated_SNPs_23440 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:908515-908545
64251 chr20 31021439 31021439 1 + G A HNSC 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCCGACCTGGAGGGTCCCAAATTCCCAGTTGAGTCT < 41bp 1 0.30002235965762 1 0.173005104064941 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021439 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_23441 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31021439 31021439 1 + G A HNSC 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCCGACCTGGAGGGTCCCAAATTCCCAGTTGAGTCTG < 41bp 1 0.39028528606266 1 0.199928432703018 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021439 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_23442 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr19 2097286 2097286 1 + T G HNSC 2097268 + 2097248 2097288 41 CAGCCCGGGAGAAGCTGGACCAAGTGGCGACAGCAGTGTAC CAGCCCGGGAGAAGCTGGACCAAGTGGCGACAGCAGTGGAC < 41bp 1 0.629666785011191 1 0.540236353874207 experiment 0.740666429977619 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IZUMO4 ENSG00000099840 CDS Human protein_coding chr19:2097268 chr19:2097286 nonsynonymous SNV 0.865 2 39 hm5C_associated_SNPs_23443 0 0 2 PPIG POSTAR2 ENCODE chr19:2097281-2097322
64251 chr10 94757357 94757357 1 + G A HNSC 94757363 + 94757343 94757383 41 AGTTTAACTTAGATGTCATACAGTGTGAATGTAAGTACTAT AGTTTAACTTAGATATCATACAGTGTGAATGTAAGTACTAT < 41bp 1 0.222287563143649 1 0.134468615055084 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94757363 chr10:94757357 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_23444 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94757318-94757357
64251 chr6 15496739 15496739 1 + G A HNSC 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCGGCAGCTGCAGGAGGGCCTGCAGCTGCGGGAGGGGCT < 41bp 1 0.0580030312889118 1 0.155485391616821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496739 nonsynonymous SNV 0.990 1 14 hm5C_associated_SNPs_23445 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr6 15496739 15496739 1 + G A HNSC 15496747 + 15496727 15496767 41 GGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCTG GGCGGCAGCTGCAGGAGGGCCTGCAGCTGCGGGAGGGGCTG < 41bp 1 0.789097484282865 1 0.68214350938797 experiment 0.421805031434271 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496747 chr6:15496739 nonsynonymous SNV 0.990 1 13 hm5C_associated_SNPs_23446 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr10 17276720 17276720 1 + G A HNSC 17276740 + 17276720 17276760 41 GGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT AGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT < 41bp 1 0.451634714663675 1 0.763182282447815 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276740 chr10:17276720 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_23447 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:17276689-17276721
64251 chr3 44442777 44442777 1 + A G HNSC 44442795 + 44442775 44442815 41 TTATTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA TTGTTCTCACCAAAGCTCAGCAGGCAAGAGAGAACATGAAA < 41bp 1 0.321441116227855 1 0.182885199785233 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCAIM ENSG00000179152 CDS Human protein_coding chr3:44442795 chr3:44442777 nonsynonymous SNV 0.765 2 3 hm5C_associated_SNPs_23449 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:44442773-44442797
64251 chr11 66411238 66411238 1 + T C HNSC 66411252 + 66411232 66411272 41 TATAATTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT TATAATCACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT < 41bp 1 0.0557226507039943 1 0.0271115303039551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411252 chr11:66411238 nonsynonymous SNV 0.989 2 7 hm5C_associated_SNPs_23450 0 0 9 SRSF1 POSTAR2 GSE83923,GSM2221668 chr11:66411220-66411240
64251 chr20 25205869 25205869 1 + G A HNSC 25205875 + 25205855 25205895 41 GAGACACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT GAGACACAGCCGCAAAGCAGCCCCTTCTCATGCATGGACCT < 41bp 1 0.177453346087712 1 0.0213847458362579 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25205875 chr20:25205869 nonsynonymous SNV 0.001 1 15 hm5C_associated_SNPs_23451 0 0 2 DDX55 POSTAR2 ENCODE chr20:25205839-25205880
64251 chr17 38142913 38142913 1 + A G HNSC 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCCTGTCTCCAACTCCTCGTGGTCATCTTCATGATGAA < 41bp 1 0.414276087679778 1 0.146660327911377 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142913 nonsynonymous SNV 0.968 5 8 hm5C_associated_SNPs_23452 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr19 54621975 54621975 1 + T C HNSC 54621957 + 54621937 54621977 41 TTCTCCTTTCCTACAGTTTGCTGAGATTATGATGAAGATTG TTCTCCTTTCCTACAGTTTGCTGAGATTATGATGAAGACTG < 41bp 1 0.304395700490145 1 0.134231626987457 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54621957 chr19:54621975 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_23453 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:54621951-54621989
64251 chr3 196545014 196545014 1 + A T HNSC 196545016 + 196544996 196545036 41 ACTTTTGGGAATGGAAGGATCTGTTAAGCTCAGTGAGTAAC ACTTTTGGGAATGGAAGGTTCTGTTAAGCTCAGTGAGTAAC < 41bp 1 0.234731029949997 1 0.0833050012588501 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196545016 chr3:196545014 synonymous SNV . 0 19 hm5C_associated_SNPs_23454 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:196544965-196545021
64251 chr4 113189405 113189405 1 + C T HNSC 113189402 + 113189382 113189422 41 GAAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCA GAAGACTGGAAGTAATCCTACATTAGCCTCTGATGATTCCA < 41bp 1 0.190351339373763 1 0.0392666459083557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP1AR ENSG00000138660 CDS Human protein_coding chr4:113189402 chr4:113189405 nonsynonymous SNV 0.861 4 24 hm5C_associated_SNPs_23457 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:113189355-113189410
64251 chr7 129093089 129093089 1 + C T HNSC 129093106 + 129093086 129093126 41 ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC ATTTAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC < 41bp 1 0.623012987534434 1 0.188028156757355 experiment 0.753974024931132 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093106 chr7:129093089 nonsynonymous SNV 0.998 0 4 hm5C_associated_SNPs_23477 0 0 6 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr12 112227669 112227669 1 + C A HNSC 112227678 + 112227658 112227698 41 GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCTACAC GGGAAAACCATACCCATTGACGGAGACTTCTTCAGCTACAC < 41bp 1 0.712242217096554 1 0.860057473182678 experiment 0.575515565806892 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227678 chr12:112227669 synonymous SNV . 0 12 hm5C_associated_SNPs_23478 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112227652-112227684
64251 chr19 10897294 10897294 1 + A T HNSC 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGTGCCAG < 41bp 1 0.198656608070019 1 0.157701969146729 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897294 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_23479 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10897283-10897305
64251 chr6 31601231 31601231 1 + G A HNSC 31601218 + 31601198 31601238 41 CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAG CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTAGACCAAG < 41bp 1 0.282103854566859 1 0.109017789363861 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31601218 chr6:31601231 synonymous SNV . 0 34 hm5C_associated_SNPs_23481 0 0 25 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31601183-31601237
64251 chr12 6618931 6618931 1 + A C HNSC 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCCCTT < 41bp 1 0.143352283254319 1 0.0866802334785461 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618931 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_23482 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6618923-6618949
64251 chr7 44685013 44685013 1 + C G HNSC 44685003 + 44684983 44685023 41 CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGT CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCGTGGCTGCTGT < 41bp 1 0.264580928121779 1 0.678133726119995 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44685003 chr7:44685013 nonsynonymous SNV 0.846 0 31 hm5C_associated_SNPs_23483 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44684987-44685021
64251 chr2 74782758 74782758 1 + G T HNSC 74782770 + 74782750 74782790 41 GCCCTGGAGATGCTGGAGAACTCCTTGTACAGCCCTACCTG GCCCTGGATATGCTGGAGAACTCCTTGTACAGCCCTACCTG < 41bp 1 0.447429743561997 1 0.442048162221909 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DOK1 ENSG00000115325 CDS Human protein_coding chr2:74782770 chr2:74782758 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_23484 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:74782745-74782787
64251 chr1 45218850 45218850 1 + G A HNSC 45218831 + 45218811 45218851 41 CACTAGGCCTTCCTGCCCTGCAGTGGCTGAAATACCATTGA CACTAGGCCTTCCTGCCCTGCAGTGGCTGAAATACCATTAA < 41bp 1 0.368719743133769 1 0.275592625141144 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218831 chr1:45218850 synonymous SNV . 0 40 hm5C_associated_SNPs_23485 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr1 45218850 45218850 1 + G A HNSC 45218837 + 45218817 45218857 41 GCCTTCCTGCCCTGCAGTGGCTGAAATACCATTGAGGATGG GCCTTCCTGCCCTGCAGTGGCTGAAATACCATTAAGGATGG < 41bp 1 0.793364266624292 1 0.206846445798874 experiment 0.413271466751415 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218837 chr1:45218850 synonymous SNV . 0 34 hm5C_associated_SNPs_23486 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr1 45218850 45218850 1 + G A HNSC 45218845 + 45218825 45218865 41 GCCCTGCAGTGGCTGAAATACCATTGAGGATGGTCAGCGAG GCCCTGCAGTGGCTGAAATACCATTAAGGATGGTCAGCGAG < 41bp 1 0.164443580990498 1 0.0601127743721008 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218845 chr1:45218850 synonymous SNV . 0 26 hm5C_associated_SNPs_23487 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr1 45218850 45218850 1 + G A HNSC 45218862 + 45218842 45218882 41 ATACCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGT ATACCATTAAGGATGGTCAGCGAGGAGATGGAAGAGCAAGT < 41bp 1 0.501632265061875 1 0.530737161636353 experiment 0.996735469876249 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218862 chr1:45218850 synonymous SNV . 0 9 hm5C_associated_SNPs_23488 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr3 184045463 184045463 1 + G C HNSC 184045472 + 184045452 184045492 41 AGGCTATCATTGAGGAATATCTCCATCTCAATGACATGAAA AGGCTATCATTCAGGAATATCTCCATCTCAATGACATGAAA < 41bp 1 0.740543202892029 1 0.859813213348389 experiment 0.518913594215942 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184045472 chr3:184045463 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_23490 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184045412-184045486
64251 chr8 61757439 61757439 1 + G C HNSC 61757430 + 61757410 61757450 41 ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCC ATTTGCTTTGCAGTTGGGGACGGTGGACACACATTCTTTCC < 41bp 1 0.200293098215033 1 0.517277896404266 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757430 chr8:61757439 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_23491 0 0 5 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr8:61757437-61757458
64251 chr4 8608483 8608483 1 + G T HNSC 8608478 + 8608458 8608498 41 TTTCAGGGTGCCGGCTACAACGGGTGGACGAGCGGGAGGCA TTTCAGGGTGCCGGCTACAACGGGTTGACGAGCGGGAGGCA < 41bp 1 0.788610763998197 1 0.929765641689301 experiment 0.422778472003606 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control CPZ ENSG00000109625 CDS Human protein_coding chr4:8608478 chr4:8608483 nonsynonymous SNV 0.714 1 26 hm5C_associated_SNPs_23496 0 0 1 DDX24 POSTAR2 ENCODE chr4:8608462-8608521
64251 chr8 144732950 144732950 1 + G A HNSC 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCATCACTCAGACCTTATTGAACACCA < 41bp 1 0.578233247218846 1 0.37718939781189 experiment 0.843533505562307 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732950 nonsynonymous SNV 0.004 1 20 hm5C_associated_SNPs_23497 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:144732906-144732960
64251 chr11 67376948 67376948 1 + G C HNSC 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACGCACACGAGGGGGAGCCGGGCACCTGCAAGGACCGG < 41bp 1 0.41380717256798 1 0.72754430770874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376948 nonsynonymous SNV 0.935 5 9 hm5C_associated_SNPs_23498 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr10 63851924 63851924 1 + C T HNSC 63851921 + 63851901 63851941 41 GTCGGCGGCAGCAGAAGCCCCTACGGATGATCAGCCTACAG GTCGGCGGCAGCAGAAGCCCCTATGGATGATCAGCCTACAG < 41bp 1 0.275046556850877 1 0.332787930965424 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID5B ENSG00000150347 CDS Human protein_coding chr10:63851921 chr10:63851924 nonsynonymous SNV 0.042 1 24 hm5C_associated_SNPs_23500 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr10:63851917-63851957
64251 chr12 53849783 53849783 1 + G T HNSC 53849767 + 53849747 53849787 41 TTCAAAGCCTTTGCTATGATCATTGACAAACTGGAAGAGGT TTCAAAGCCTTTGCTATGATCATTGACAAACTGGAATAGGT < 41bp 1 0.167816755603889 1 0.0826996564865112 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53849767 chr12:53849783 stopgain 1.000 1 37 hm5C_associated_SNPs_23501 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53849677-53849785
64251 chr18 56402442 56402442 1 + G C HNSC 56402451 + 56402431 56402471 41 AAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTG AAGGTGTCAAGCAGCAGAAGCTTTTGAAATCCAGCATTCTG < 41bp 1 0.0326024820442014 1 0.0194087624549866 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56402451 chr18:56402442 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_23502 0 0 4 BUD13 POSTAR2 ENCODE chr18:56402387-56402474
64251 chr5 72798854 72798854 1 + G C HNSC 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CATTACAGGCCATGCTGAGACAAAGCAGCTCACAGAAATGC < 41bp 1 0.628008105109288 1 0.394893407821655 experiment 0.743983789781423 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798854 synonymous SNV . 0 31 hm5C_associated_SNPs_23503 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr1 161173235 161173235 1 + G A HNSC 161173246 + 161173226 161173266 41 GAGGTGTTCGGCAGTGGCAGCCAGATGTGGAATGGGCACAG GAGGTGTTCAGCAGTGGCAGCCAGATGTGGAATGGGCACAG < 41bp 1 0.643115949624547 1 0.716034710407257 experiment 0.713768100750907 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161173246 chr1:161173235 nonsynonymous SNV 0.998 2 10 hm5C_associated_SNPs_23505 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:161173223-161173249
64251 chr2 27900722 27900722 1 + G A HNSC 27900703 + 27900683 27900723 41 TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAGG TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAAG < 41bp 1 0.27799542561184 1 0.246346920728683 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900703 chr2:27900722 nonsynonymous SNV 0.995 1 40 hm5C_associated_SNPs_23506 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27900681-27900730
64251 chr19 42848890 42848890 1 + G T HNSC 42848907 + 42848887 42848927 41 TTCGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT TTCTTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT < 41bp 1 0.313850928965124 1 0.147659748792648 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848907 chr19:42848890 nonsynonymous SNV 0.456 3 4 hm5C_associated_SNPs_23507 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42848867-42848905
64251 chr16 30664127 30664127 1 + C T HNSC 30664142 + 30664122 30664162 41 TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA TGCCTTGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA < 41bp 1 0.703059877554173 1 0.565787672996521 experiment 0.593880244891653 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664142 chr16:30664127 nonsynonymous SNV 0.009 0 6 hm5C_associated_SNPs_23510 0 0 3 PPIG POSTAR2 ENCODE chr16:30664094-30664159
64251 chr18 13057631 13057631 1 + G C HNSC 13057639 + 13057619 13057659 41 CATGCTTGCTGTGTCGGGATCGCTTCCCAGACCCTCCTCAG CATGCTTGCTGTCTCGGGATCGCTTCCCAGACCCTCCTCAG < 41bp 1 0.265381151496458 1 0.126980096101761 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13057639 chr18:13057631 nonsynonymous SNV 0.954 2 13 hm5C_associated_SNPs_23511 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13057607-13057645
64251 chr21 40191453 40191453 1 + G A HNSC 40191451 + 40191431 40191471 41 TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT TCCCAAAGACCACGACTCCCCTAAGAACGGTGCGGACAGCT < 41bp 1 0.431986747747161 1 0.23714604973793 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETS2 ENSG00000157557 CDS Human protein_coding chr21:40191451 chr21:40191453 nonsynonymous SNV 0.023 0 23 hm5C_associated_SNPs_23512 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr21:40191444-40191483
64251 chr5 112868689 112868689 1 + G C HNSC 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTGAAAGAGTTGCCGCAGACAGACGGGAAAGGA < 41bp 1 0.522112043643562 1 0.1002456843853 experiment 0.955775912712875 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868689 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_23513 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868689 112868689 1 + G C HNSC 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTGAAAGAGTTGCCGCAGACAGACGGGAAAGGAT < 41bp 1 0.595966157194087 1 0.749688506126404 experiment 0.808067685611826 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868689 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_23514 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr3 150321201 150321201 1 + G C HNSC 150321221 + 150321201 150321241 41 GAGGCCTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT CAGGCCTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT < 41bp 1 0.766078626312435 1 0.425613224506378 experiment 0.467842747375129 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SELENOT ENSG00000198843 CDS Human protein_coding chr3:150321221 chr3:150321201 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_23515 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150321161-150321201
64251 chr3 160137327 160137327 1 + G T HNSC 160137312 + 160137292 160137332 41 AAAAAAATCTGGCAGGATTCCAGGAATATATGGAAGATTGG AAAAAAATCTGGCAGGATTCCAGGAATATATGGAATATTGG < 41bp 1 0.781958189905079 1 0.460602998733521 experiment 0.436083620189841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160137312 chr3:160137327 nonsynonymous SNV 0.998 5 36 hm5C_associated_SNPs_23517 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160137140-160137330
64251 chr5 153760021 153760021 1 + G A HNSC 153760010 + 153759990 153760030 41 ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCGCAAG ATCTCTTGGCTTCTTCAGACCGCATTGCTCGAAACCGCAAG < 41bp 1 0.190839523771658 1 0.119844615459442 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760010 chr5:153760021 synonymous SNV . 0 32 hm5C_associated_SNPs_23518 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chr5 153760021 153760021 1 + G A HNSC 153760024 + 153760004 153760044 41 TCAGACCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC TCAGACCGCATTGCTCGAAACCGCAAGACCATTGTGTGCCC < 41bp 1 0.503401812792606 1 0.233085989952087 experiment 0.993196374414787 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760024 chr5:153760021 synonymous SNV . 0 18 hm5C_associated_SNPs_23519 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chrX 41000592 41000592 1 + G A HNSC 41000586 + 41000566 41000606 41 TCAATGGAAAGATGAATGCACTGAATGAAGTTAATAAGGTG TCAATGGAAAGATGAATGCACTGAATAAAGTTAATAAGGTG < 41bp 1 0.268278702790841 1 0.468676626682281 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41000586 chrX:41000592 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_23522 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41000566-41000675
64251 chr16 29994478 29994478 1 + C G HNSC 29994488 + 29994468 29994508 41 ATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGC ATCAGCGCCTGCAGCCAGAGCAGCTCCGTCAACAGCCTAGC < 41bp 1 0.332474411462859 1 0.269552230834961 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994488 chr16:29994478 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_23523 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:29994460-29994480
64251 chr16 29994478 29994478 1 + C G HNSC 29994493 + 29994473 29994513 41 CGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG CGCCTGCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG < 41bp 1 0.0805092087886834 1 0.225979715585709 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994493 chr16:29994478 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_23524 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:29994460-29994480
64251 chr16 57786709 57786709 1 + G C HNSC 57786697 + 57786677 57786717 41 TCGCCTGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGC TCGCCTGGCCCAGGAGCGTCCTCTTCAACCCACACGGCTGC < 41bp 1 0.19554549202509 1 0.191257864236832 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786697 chr16:57786709 nonsynonymous SNV 0.925 5 33 hm5C_associated_SNPs_23526 0 0 1 PPIG POSTAR2 ENCODE chr16:57786704-57786734
64251 chr16 57786709 57786709 1 + G C HNSC 57786702 + 57786682 57786722 41 TGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGCTGCCT TGGCCCAGGAGCGTCCTCTTCAACCCACACGGCTGCTGCCT < 41bp 1 0.397799218561598 1 0.19084706902504 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786702 chr16:57786709 nonsynonymous SNV 0.925 5 28 hm5C_associated_SNPs_23527 0 0 1 PPIG POSTAR2 ENCODE chr16:57786704-57786734
64251 chr9 139749723 139749723 1 + G A HNSC 139749738 + 139749718 139749758 41 GGGCAGACAGGCCCGGGGGGCGTCGTGGGTCTGGACGACCT GGGCAAACAGGCCCGGGGGGCGTCGTGGGTCTGGACGACCT < 41bp 1 0.199350782466324 1 0.358616292476654 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139749738 chr9:139749723 synonymous SNV . 0 6 hm5C_associated_SNPs_23528 0 0 4 BUD13 POSTAR2 ENCODE chr9:139749694-139749732
64251 chr2 233671317 233671317 1 + A T HNSC 233671297 + 233671277 233671317 41 GTGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAA GTGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAT < 41bp 1 0.202339822647834 1 0.325406134128571 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671297 chr2:233671317 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_23529 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:233671300-233671320
64251 chr17 34001260 34001260 1 + G A HNSC 34001266 + 34001246 34001286 41 ACTCACCGCCAAGGGCACATCTATATGGAAATGAACTTCAC ACTCACCGCCAAGGACACATCTATATGGAAATGAACTTCAC < 41bp 1 0.545919632744562 1 0.60204416513443 experiment 0.908160734510877 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:34001266 chr17:34001260 synonymous SNV . 0 15 hm5C_associated_SNPs_23530 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:34001240-34001280
64251 chr4 77660200 77660200 1 + C T HNSC 77660180 + 77660160 77660200 41 TGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTC TGGCCGGGAGCGTTCAGGCTCCATGGACAATACTTCTGCTT < 41bp 1 0.0944559148155731 1 0.228184372186661 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77660180 chr4:77660200 stopgain 0.983 0 41 hm5C_associated_SNPs_23533 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:77660176-77660203
64251 chr22 39918110 39918110 1 + G A HNSC 39918100 + 39918080 39918120 41 TCCTTTAGTTTAGAGCTGGGCAGTGAAGTGGATATCACTGA TCCTTTAGTTTAGAGCTGGGCAGTGAAGTGAATATCACTGA < 41bp 1 0.549871621131485 1 0.335456639528275 experiment 0.900256757737029 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918100 chr22:39918110 nonsynonymous SNV 0.997 2 31 hm5C_associated_SNPs_23534 0 0 56 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918000-39918173
64251 chr22 39918110 39918110 1 + G A HNSC 39918115 + 39918095 39918135 41 CTGGGCAGTGAAGTGGATATCACTGAAGGAGATAGGAAGCC CTGGGCAGTGAAGTGAATATCACTGAAGGAGATAGGAAGCC < 41bp 1 0.650058360784047 1 0.0917175710201263 experiment 0.699883278431907 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918115 chr22:39918110 nonsynonymous SNV 0.997 2 16 hm5C_associated_SNPs_23535 0 0 56 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918000-39918173
64251 chr6 147525760 147525760 1 + G A HNSC 147525772 + 147525752 147525792 41 TCCGCCTGGGAACCGGGAGCCGGAGATCCAGGAAACGCTCC TCCGCCTGAGAACCGGGAGCCGGAGATCCAGGAAACGCTCC < 41bp 1 0.680705713764537 1 0.927506625652313 experiment 0.638588572470927 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147525772 chr6:147525760 nonsynonymous SNV 0.989 1 9 hm5C_associated_SNPs_23536 0 0 5 GRWD1 POSTAR2 ENCODE chr6:147525656-147525858
64251 chr1 27088729 27088729 1 + C T HNSC 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGATAGATA < 41bp 1 0.196289032944718 1 0.0512232184410095 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088729 stopgain 1.000 1 36 hm5C_associated_SNPs_23537 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:27088714-27088751
64251 chr4 41652416 41652416 1 + G A HNSC 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGACAGGAAAGTCAGTGTGAATGGAGAGACGGT < 41bp 1 0.264627398523394 1 0.360642313957214 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652416 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_23538 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:41652398-41652419
64251 chr5 176520484 176520484 1 + C T HNSC 176520483 + 176520463 176520503 41 GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCG GCGTCTCTCCTCCAGCGGCCCTGCCTTGCTCGCCGGCCTCG < 41bp 1 0.309882468431465 1 0.0616801083087921 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176520483 chr5:176520484 nonsynonymous SNV 0.043 1 22 hm5C_associated_SNPs_23539 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176520475-176520508
64251 chr3 97596560 97596560 1 + G T HNSC 97596546 + 97596526 97596566 41 TGAGAGCTGGAAGTGGGGAGCGTGTTACCTTCCAGTTGCCA TGAGAGCTGGAAGTGGGGAGCGTGTTACCTTCCATTTGCCA < 41bp 1 0.176847147120572 1 0.112462669610977 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRYBG3 ENSG00000080200 CDS Human protein_coding chr3:97596546 chr3:97596560 nonsynonymous SNV 0.922 0 35 hm5C_associated_SNPs_23540 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:97596539-97596560
64251 chrX 47069517 47069517 1 + G C HNSC 47069520 + 47069500 47069540 41 TGCACAACTTCCCTCCTGACCAGGTAATGCCCAGTTGTTGG TGCACAACTTCCCTCCTCACCAGGTAATGCCCAGTTGTTGG < 41bp 1 0.492377866168078 1 0.634246408939362 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47069520 chrX:47069517 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_23541 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chrX:47069501-47069522
64251 chr5 176710792 176710792 1 + G A HNSC 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACCAAATCATTGATGCTGGTCCC < 41bp 1 0.0647591237436759 1 0.268729597330093 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710792 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_23542 2 0 4 LIN28A POSTAR2 GSE39873,GSM980594 chr5:176710780-176710800
64251 chr16 29811305 29811305 1 + G A HNSC 29811295 + 29811275 29811315 41 CCACCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGA CCACCAGAGGCAAAGAGAGCCCGAGGCCCTAAGGAAGAGGA < 41bp 1 0.240024646722217 1 0.785466432571411 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811295 chr16:29811305 nonsynonymous SNV 0.996 0 31 hm5C_associated_SNPs_23543 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:29811305-29811306
64251 chr16 29811305 29811305 1 + G A HNSC 29811301 + 29811281 29811321 41 GAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGAGATCGG GAGGCAAAGAGAGCCCGAGGCCCTAAGGAAGAGGAGATCGG < 41bp 1 0.234688386853639 1 0.169519543647766 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811301 chr16:29811305 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_23544 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:29811305-29811306
64251 chr1 233482347 233482347 1 + C G HNSC 233482335 + 233482315 233482355 41 GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAA GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTGTAAGGGAA < 41bp 1 0.139125460180242 1 0.116422474384308 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482335 chr1:233482347 nonsynonymous SNV 0.994 5 33 hm5C_associated_SNPs_23555 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233482327-233482358
64251 chr16 2569686 2569686 1 + C G HNSC 2569701 + 2569681 2569721 41 CTCATCTTCGCCGAGGTGCTCGGCCTCTACGGTCTCATCGT CTCATGTTCGCCGAGGTGCTCGGCCTCTACGGTCTCATCGT < 41bp 1 0.538980839255894 1 0.57479852437973 experiment 0.922038321488212 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569701 chr16:2569686 nonsynonymous SNV 0.925 4 6 hm5C_associated_SNPs_23558 0 0 39 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2569660-2569720
64251 chr6 27101060 27101060 1 + G A HNSC 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGCAACGCAGCCCGCGACAACAA < 41bp 1 0.561718124414889 1 0.456470102071762 experiment 0.876563751170222 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101060 synonymous SNV . 0 27 hm5C_associated_SNPs_23559 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101060 27101060 1 + G A HNSC 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCAGCCCGCGACAACAAGAAGACCC < 41bp 1 0.402934027875585 1 0.403565526008606 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101060 synonymous SNV . 0 19 hm5C_associated_SNPs_23560 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101060 27101060 1 + G A HNSC 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCAGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.501986120522199 1 0.475526094436646 experiment 0.996027758955601 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101060 synonymous SNV . 0 18 hm5C_associated_SNPs_23561 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 142519629 142519629 1 + C G HNSC 142519636 + 142519616 142519656 41 CACTCAGCCAACTCAGCCATCATCATCTTCAACTTATGACC CACTCAGCCAACTGAGCCATCATCATCTTCAACTTATGACC < 41bp 1 0.574335197454975 1 0.217449486255646 experiment 0.85132960509005 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519636 chr6:142519629 nonsynonymous SNV 0.997 0 14 hm5C_associated_SNPs_23569 0 0 19 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:142519593-142519686
64251 chr12 6979496 6979496 1 + T C HNSC 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGCGGTGCTTCCCTCAAGCCCGAATTCGTGG < 41bp 1 0.131280406712829 1 0.0333411395549774 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979496 synonymous SNV . 0 13 hm5C_associated_SNPs_23570 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:6979473-6979497
64251 chr12 6979496 6979496 1 + T C HNSC 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGCGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT < 41bp 1 0.589081321775144 1 0.899112462997437 experiment 0.821837356449711 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979496 synonymous SNV . 0 9 hm5C_associated_SNPs_23571 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:6979473-6979497
64251 chr1 183495741 183495741 1 + A G HNSC 183495750 + 183495730 183495770 41 GTTATTACAAGAACTGTGTACAGTATTTAATGTAGATTTAC GTTATTACAAGGACTGTGTACAGTATTTAATGTAGATTTAC < 41bp 1 0.295022953000612 1 0.0332200527191162 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183495750 chr1:183495741 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_23572 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:183495737-183495771
64251 chr1 155106009 155106009 1 + G A HNSC 155106004 + 155105984 155106024 41 CCCATCCACCAGCATGAAGACCGCTGCTTGAGGTTGAAGGT CCCATCCACCAGCATGAAGACCGCTACTTGAGGTTGAAGGT < 41bp 1 0.138362238877611 1 0.180885076522827 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106004 chr1:155106009 nonsynonymous SNV 0.967 5 26 hm5C_associated_SNPs_23573 0 0 4 BUD13 POSTAR2 ENCODE chr1:155105924-155106018
64251 chr7 150931160 150931160 1 + T G HNSC 150931172 + 150931152 150931192 41 GGGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTC GGGCTGTCGCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTC < 41bp 1 0.465770302181657 1 0.145815789699554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150931172 chr7:150931160 synonymous SNV . 0 9 hm5C_associated_SNPs_23575 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:150931127-150931169
64251 chr7 150931160 150931160 1 + T G HNSC 150931173 + 150931153 150931193 41 GGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTCC GGCTGTCGCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTCC < 41bp 1 0.609130861342843 1 0.133744657039642 experiment 0.781738277314314 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150931173 chr7:150931160 synonymous SNV . 0 8 hm5C_associated_SNPs_23576 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:150931127-150931169
64251 chr19 3119235 3119235 1 + G A HNSC 3119221 + 3119201 3119241 41 CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCAT CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCAGACCAT < 41bp 1 0.276145022552385 1 0.366033017635345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119221 chr19:3119235 nonsynonymous SNV 0.990 1 35 hm5C_associated_SNPs_23579 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:3119208-3119246
64251 chr5 65105442 65105442 1 + G A HNSC 65105431 + 65105411 65105451 41 GAAAATTGGGTGTGGGACGTCGATTCCCTCCGAAGATTGTC GAAAATTGGGTGTGGGACGTCGATTCCCTCCAAAGATTGTC < 41bp 1 0.120050253828455 1 0.296836614608765 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65105431 chr5:65105442 nonsynonymous SNV 0.994 1 32 hm5C_associated_SNPs_23580 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:65105430-65105450
64251 chr5 43650623 43650623 1 + T C HNSC 43650617 + 43650597 43650637 41 GGTTGGCACTGATGGGAGGACATTTGTATCCTTCCACAACT GGTTGGCACTGATGGGAGGACATTTGCATCCTTCCACAACT < 41bp 1 0.135141726991381 1 0.0290204286575317 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43650617 chr5:43650623 nonsynonymous SNV 0.994 1 27 hm5C_associated_SNPs_23581 0 0 7 FXR2 POSTAR2 GSE39682,GSM977620 chr5:43650622-43650643
64251 chr2 9528450 9528450 1 + C T HNSC 9528446 + 9528426 9528466 41 AGTCCCAACCGGCGGGAAGACCGGCCCATCAGCTTCTACCA AGTCCCAACCGGCGGGAAGACCGGTCCATCAGCTTCTACCA < 41bp 1 0.537476092104064 1 0.305991113185883 experiment 0.925047815791872 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASAP2 ENSG00000151693 CDS Human protein_coding chr2:9528446 chr2:9528450 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_23582 0 0 2 GRWD1 POSTAR2 ENCODE chr2:9528422-9528500
64251 chr22 40660731 40660731 1 + A G HNSC 40660713 + 40660693 40660733 41 CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATT CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAGTT < 41bp 1 0.085751080587717 1 0.0933543741703033 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40660713 chr22:40660731 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_23583 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:40660720-40660740
64251 chr14 23070609 23070609 1 + C T HNSC 23070600 + 23070580 23070620 41 GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCC GCTGGCTGAGTAGCTGGCTGCCCACGTGGTGCCCCACTTCC < 41bp 1 0.266185667226093 1 0.212364077568054 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070600 chr14:23070609 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_23584 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chr6 151673725 151673725 1 + T C HNSC 151673713 + 151673693 151673733 41 CAGCAGTTTGGAAGGAAGCCCTCCTCCCTGCCTAGGTCAAG CAGCAGTTTGGAAGGAAGCCCTCCTCCCTGCCCAGGTCAAG < 41bp 1 0.100627706695523 1 0.036022961139679 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151673713 chr6:151673725 nonsynonymous SNV 0.000 0 33 hm5C_associated_SNPs_23585 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151673722-151673745
64251 chr22 46239047 46239047 1 + A G HNSC 46239049 + 46239029 46239069 41 CTGAAATCTACTAGAGACACCCCTAAGCCAGTAAGTACCCT CTGAAATCTACTAGAGACGCCCCTAAGCCAGTAAGTACCCT < 41bp 1 0.122984035735859 1 0.145946681499481 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46239049 chr22:46239047 nonsynonymous SNV 0.002 0 19 hm5C_associated_SNPs_23586 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:46239008-46239055
64251 chr11 57575889 57575889 1 + C T HNSC 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGTGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC < 41bp 1 0.0903378581723821 1 0.0673407912254333 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575889 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_23587 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57575863-57575903
64251 chr1 26136267 26136267 1 + C T HNSC 26136269 + 26136249 26136289 41 CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCC CATCATCCTCTCCAAAGATGCCACCCACGTCCGCGACTTCC < 41bp 1 0.0407452325558459 1 0.0585837066173553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136269 chr1:26136267 synonymous SNV . 0 19 hm5C_associated_SNPs_23588 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26136186-26136269
64251 chr1 26136267 26136267 1 + C T HNSC 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGATGCCACCCACGTCCGCGACTTCCG < 41bp 1 0.173585808931669 1 0.0296973884105682 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136267 synonymous SNV . 0 18 hm5C_associated_SNPs_23589 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26136186-26136269
64251 chr1 26136267 26136267 1 + C T HNSC 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGATGCCACCCACGTCCGCGACTTCCGGCT < 41bp 1 0.11682452025264 1 0.126838862895966 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136267 synonymous SNV . 0 15 hm5C_associated_SNPs_23590 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26136186-26136269
64251 chr1 26136267 26136267 1 + C T HNSC 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGATGCCACCCACGTCCGCGACTTCCGGCTC < 41bp 1 0.507910260727476 1 0.135833889245987 experiment 0.984179478545048 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136267 synonymous SNV . 0 14 hm5C_associated_SNPs_23591 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26136186-26136269
64251 chr10 94109493 94109493 1 + A G HNSC 94109496 + 94109476 94109516 41 CAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTT CAGATCATGTCTCTGCTGCTCGAATCTTGTGTGGAGCCCTT < 41bp 1 0.339959527243575 1 0.196446180343628 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94109496 chr10:94109493 nonsynonymous SNV 0.998 1 18 hm5C_associated_SNPs_23592 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:94109450-94109497
64251 chr11 102094469 102094469 1 + T A HNSC 102094453 + 102094433 102094473 41 TCAGGAATTGAGAACAATGACGACCAATAGCTCAGATCCTT TCAGGAATTGAGAACAATGACGACCAATAGCTCAGAACCTT < 41bp 1 0.462305344424323 1 0.329631507396698 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YAP1 ENSG00000137693 CDS Human protein_coding chr11:102094453 chr11:102094469 nonsynonymous SNV 0.993 3 37 hm5C_associated_SNPs_23593 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:102094424-102094478
64251 chr22 31673101 31673101 1 + A G HNSC 31673093 + 31673073 31673113 41 CTGCTGGACAAGATCCGGGCCATGCAGAAGCTGAGCACACC CTGCTGGACAAGATCCGGGCCATGCAGAGGCTGAGCACACC < 41bp 1 0.0710462146753037 1 0.0217837393283844 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31673093 chr22:31673101 nonsynonymous SNV 0.281 2 29 hm5C_associated_SNPs_23594 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:31673082-31673110
64251 chr16 24580555 24580555 1 + A G HNSC 24580557 + 24580537 24580577 41 TAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA TAAAGGTTATGCTGCTGGGGCACAGCCTAGACCCTCAGCAA < 41bp 1 0.234289939548361 1 0.269616782665253 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580557 chr16:24580555 synonymous SNV . 0 19 hm5C_associated_SNPs_23595 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:24580536-24580557
64251 chr17 65735667 65735667 1 + G A HNSC 65735673 + 65735653 65735693 41 TTCCTGTACCTGAAGTGTAGCGAAAATGCTACTATGACTCT TTCCTGTACCTGAAATGTAGCGAAAATGCTACTATGACTCT < 41bp 1 0.652290589247688 1 0.687578856945038 experiment 0.695418821504623 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735673 chr17:65735667 synonymous SNV . 0 15 hm5C_associated_SNPs_23596 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65735642-65735673
64251 chr20 37144935 37144935 1 + T C HNSC 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC GCAAGAATTGAATCAGCATCCCTGCCTTAAACATCTGCCTC < 41bp 1 0.10366367357344 1 0.140672743320465 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144935 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_23597 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:37144935-37144960
64251 chr12 54394074 54394074 1 + T C HNSC 54394072 + 54394052 54394092 41 GGTTTCCGGCCACCGGGGCTCATCCCGCCGCCGCCAGACCC GGTTTCCGGCCACCGGGGCTCACCCCGCCGCCGCCAGACCC < 41bp 1 0.49971415755613 1 0.0817683935165405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394072 chr12:54394074 synonymous SNV . 0 23 hm5C_associated_SNPs_23598 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54394060-54394080
64251 chr17 4859899 4859899 1 + G A HNSC 4859885 + 4859865 4859905 41 CAGGTGCAAACTGGCTCAGTCTAATGGCTGGGGGGTGATGG CAGGTGCAAACTGGCTCAGTCTAATGGCTGGGGGATGATGG < 41bp 1 0.312665285051515 1 0.13178938627243 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859885 chr17:4859899 nonsynonymous SNV 0.996 4 35 hm5C_associated_SNPs_23599 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:4859881-4859932
64251 chr16 24835045 24835045 1 + G A HNSC 24835030 + 24835010 24835050 41 ATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCC ATTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCAACCCC < 41bp 1 0.139192746585611 1 0.157420575618744 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835030 chr16:24835045 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_23600 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835045 24835045 1 + G A HNSC 24835031 + 24835011 24835051 41 TTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCC TTCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCAACCCCC < 41bp 1 0.512230092096315 1 0.328104138374329 experiment 0.975539815807371 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835031 chr16:24835045 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_23601 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835045 24835045 1 + G A HNSC 24835032 + 24835012 24835052 41 TCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCG TCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCAACCCCCG < 41bp 1 0.67627479038177 1 0.264687895774841 experiment 0.647450419236459 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835032 chr16:24835045 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_23602 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835045 24835045 1 + G A HNSC 24835033 + 24835013 24835053 41 CCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGA CCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCAACCCCCGA < 41bp 1 0.230809469036997 1 0.267115652561188 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835033 chr16:24835045 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_23603 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835045 24835045 1 + G A HNSC 24835034 + 24835014 24835054 41 CACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAG CACAAGCCTGTGGGGTCCCCCAAGCAGCAGCAACCCCCGAG < 41bp 1 0.483887807435404 1 0.479823082685471 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835034 chr16:24835045 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_23604 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr9 131846992 131846992 1 + T G HNSC 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGGATTTGTCATCGTCGGTTTCGTGACCCT < 41bp 1 0.55111534087748 1 0.435487568378448 experiment 0.897769318245041 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131846992 nonsynonymous SNV 0.920 1 14 hm5C_associated_SNPs_23607 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131846965-131847000
64251 chr5 128440948 128440948 1 + C T HNSC 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTAAAGGTCTTGGGAGCATGGTTCAAGAAATTGATTT < 41bp 1 0.35012795387669 1 0.35261207818985 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440948 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_23609 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:128440907-128440949
64251 chr16 3712055 3712055 1 - G A HNSC 3712045 - 3712025 3712065 41 CCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCG CCTGCGCATGTAGCAGCTGGCCAAGACCCAGGAGGAGCGCG < 41bp 1 0.284871799386461 1 0.306971162557602 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712045 chr16:3712055 stopgain 1.000 1 11 hm5C_associated_SNPs_23610 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712055 3712055 1 - G A HNSC 3712049 - 3712029 3712069 41 ACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAG ACTTCCTGCGCATGTAGCAGCTGGCCAAGACCCAGGAGGAG < 41bp 1 0.517694750395805 1 0.788605272769928 experiment 0.964610499208389 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712049 chr16:3712055 stopgain 1.000 1 15 hm5C_associated_SNPs_23611 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712055 3712055 1 - G A HNSC 3712061 - 3712041 3712081 41 GGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAG GGGCTGCCCGCCACTTCCTGCGCATGTAGCAGCTGGCCAAG < 41bp 1 0.62276636825412 1 0.0842702090740204 experiment 0.754467263491761 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712061 chr16:3712055 stopgain 1.000 1 27 hm5C_associated_SNPs_23612 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712055 3712055 1 - G A HNSC 3712068 - 3712048 3712088 41 GAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCT GAGATGGGGGCTGCCCGCCACTTCCTGCGCATGTAGCAGCT < 41bp 1 0.323443111851471 1 0.627379357814789 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712068 chr16:3712055 stopgain 1.000 1 34 hm5C_associated_SNPs_23613 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712055 3712055 1 - G A HNSC 3712074 - 3712054 3712094 41 GTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCA GTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGTA < 41bp 1 0.493989227693304 1 0.197330206632614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712074 chr16:3712055 stopgain 1.000 1 40 hm5C_associated_SNPs_23614 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr14 102445732 102445732 1 + A G HNSC 102445731 + 102445711 102445751 41 CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTACGA CAGCTCCGGGTCCTTACACTCGGTGAAGACTCGCCCTACGA < 41bp 1 0.255873689943035 1 0.823917150497437 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102445731 chr14:102445732 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_23615 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102445724-102445761
64251 chr5 65118660 65118660 1 + G T HNSC 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTCTGGACTGCATGGACATGC < 41bp 1 0.361363496945878 1 0.189240783452988 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118660 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_23617 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr5 176710803 176710803 1 + G A HNSC 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACCGAATCATTGATACTGGTCCC < 41bp 1 0.0766587117415199 1 0.241399437189102 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710803 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_23618 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176710792-176710861
64251 chr16 57485028 57485028 1 + G C HNSC 57485048 + 57485028 57485068 41 GAAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCATTCTG CAAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCATTCTG < 41bp 1 0.109742669451532 1 0.0326958000659943 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57485048 chr16:57485028 nonsynonymous SNV 0.993 0 1 hm5C_associated_SNPs_23620 0 0 2 DDX3X POSTAR2 ENCODE chr16:57484950-57485053
64251 chr5 102472513 102472513 1 + C T HNSC 102472507 + 102472487 102472527 41 TAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGG TAATCAATGACTTGAATATGCAGTATTTCATACAAGATAGG < 41bp 1 0.432244354591953 1 0.164623320102692 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102472507 chr5:102472513 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_23621 0 0 1 ZNF622 POSTAR2 ENCODE chr5:102472471-102472526
64251 chr17 46000473 46000473 1 + C G HNSC 46000459 + 46000439 46000479 41 GCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTCAGCTGC GCTCCCCATCTGAGTGGGACCAGCAAAAAGCACTGAGCTGC < 41bp 1 0.786700519203624 1 0.773148775100708 experiment 0.426598961592752 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SP2 ENSG00000167182 CDS Human protein_coding chr17:46000459 chr17:46000473 stopgain 1.000 0 35 hm5C_associated_SNPs_23622 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr17:46000468-46000488
64251 chr9 2186186 2186186 1 + G A HNSC 2186182 + 2186162 2186202 41 GAAGAGAGTGAGGATGAAAGCAATGAAGAGGAGGAAGAGGA GAAGAGAGTGAGGATGAAAGCAATAAAGAGGAGGAAGAGGA < 41bp 1 0.473999258377491 1 0.238843768835068 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186182 chr9:2186186 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_23623 0 0 3 TRA2A POSTAR2 ENCODE chr9:2186120-2186222
64251 chr17 12016649 12016649 1 + G A HNSC 12016646 + 12016626 12016666 41 TGTGGACTCTATTGCCAAGACAAGAGATGCTGGCTGTAGGC TGTGGACTCTATTGCCAAGACAAAAGATGCTGGCTGTAGGC < 41bp 1 0.791623366918026 1 0.398810565471649 experiment 0.416753266163948 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12016646 chr17:12016649 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_23624 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:12016626-12016667
64251 chr17 35872423 35872423 1 + C G HNSC 35872403 + 35872383 35872423 41 CAGAGGTCACAGCACGCTACCAAGGACTCTCATGGCCCCTC CAGAGGTCACAGCACGCTACCAAGGACTCTCATGGCCCCTG < 41bp 1 0.774277280585827 1 0.711536943912506 experiment 0.451445438828346 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUSP14 ENSG00000161326 CDS Human other chr17:35872403 chr17:35872423 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_23625 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:35872390-35872428
64251 chr12 6637460 6637460 1 + C G HNSC 6637450 + 6637430 6637470 41 ACTGGGGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC ACTGGGGATCTGGCCATCCGCTTTCCCAATGTGGTGGACCC < 41bp 1 0.0857950473430662 1 0.0914885103702545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637450 chr12:6637460 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_23626 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:6637390-6637461
64251 chr2 233671332 233671332 1 + C T HNSC 233671347 + 233671327 233671367 41 GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG GGGTTTCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG < 41bp 1 0.129000723205626 1 0.0683043897151947 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671347 chr2:233671332 nonsynonymous SNV 0.998 5 6 hm5C_associated_SNPs_23628 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:233671307-233671345
64251 chr2 233671332 233671332 1 + C T HNSC 233671348 + 233671328 233671368 41 GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG GGTTTCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG < 41bp 1 0.192804414992795 1 0.158861249685287 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671348 chr2:233671332 nonsynonymous SNV 0.998 5 5 hm5C_associated_SNPs_23629 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:233671307-233671345
64251 chr2 233671332 233671332 1 + C T HNSC 233671351 + 233671331 233671371 41 TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA TTCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA < 41bp 1 0.0853990043109158 1 0.341053009033203 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671351 chr2:233671332 nonsynonymous SNV 0.998 5 2 hm5C_associated_SNPs_23630 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:233671307-233671345
64251 chr18 29116340 29116340 1 + C G HNSC 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGTGATTGACAAACCACCTGGCATGGCAGAAAAA < 41bp 1 0.134311224427132 1 0.145808339118958 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116340 synonymous SNV . 0 11 hm5C_associated_SNPs_23632 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr18 29116340 29116340 1 + C G HNSC 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGTGATTGACAAACCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.461789158323217 1 0.119473367929459 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116340 synonymous SNV . 0 7 hm5C_associated_SNPs_23633 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr1 222801826 222801826 1 + G C HNSC 222801845 + 222801825 222801865 41 AGATAGCAAACAGGGGAAACCACAGTCAGCAACAGATTATA ACATAGCAAACAGGGGAAACCACAGTCAGCAACAGATTATA < 41bp 1 0.578611090389874 1 0.206806033849716 experiment 0.842777819220252 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222801845 chr1:222801826 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_23634 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:222801810-222801827
64251 chr3 47451515 47451515 1 + G A HNSC 47451521 + 47451501 47451541 41 CAGGAGACCCCCCTGAGGAGCTGCGCAGCCTCCCCCCTGAC CAGGAGACCCCCCTAAGGAGCTGCGCAGCCTCCCCCCTGAC < 41bp 1 0.519585501533264 1 0.319505244493484 experiment 0.960828996933472 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47451521 chr3:47451515 nonsynonymous SNV 0.574 3 15 hm5C_associated_SNPs_23635 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:47451515-47451516
64251 chr11 62656097 62656097 1 + C G HNSC 62656090 + 62656070 62656110 41 CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG CAGCCAGGCCGTGAGGAGGGCTCCCCTGTTGAGCTGGAACG < 41bp 1 0.294026496229082 1 0.37759804725647 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656090 chr11:62656097 nonsynonymous SNV 0.015 1 28 hm5C_associated_SNPs_23637 0 0 25 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr11 62656097 62656097 1 + C G HNSC 62656092 + 62656072 62656112 41 GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC GCCAGGCCGTGAGGAGGGCTCCCCTGTTGAGCTGGAACGCC < 41bp 1 0.475013565745289 1 0.0385479629039764 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656092 chr11:62656097 nonsynonymous SNV 0.015 1 26 hm5C_associated_SNPs_23638 0 0 25 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr14 21963395 21963395 1 + C G HNSC 21963397 + 21963377 21963417 41 TCTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAA TCTTCTCACAGGTTGAGTGTCCTTCTCAGATGGATGTTGAA < 41bp 1 0.0185690989811523 1 0.0477499663829803 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963397 chr14:21963395 nonsynonymous SNV 0.998 1 19 hm5C_associated_SNPs_23640 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr14 21963395 21963395 1 + C G HNSC 21963398 + 21963378 21963418 41 CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAT CTTCTCACAGGTTGAGTGTCCTTCTCAGATGGATGTTGAAT < 41bp 1 0.0903286193412967 1 0.0311934649944305 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963398 chr14:21963395 nonsynonymous SNV 0.998 1 18 hm5C_associated_SNPs_23641 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr17 62223821 62223821 1 + G C HNSC 62223805 + 62223785 62223825 41 GCCGCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCG GCCGCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCCAGCG < 41bp 1 0.37118570885047 1 0.29120272397995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223805 chr17:62223821 . . 0 37 hm5C_associated_SNPs_23642 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223821 62223821 1 + G C HNSC 62223808 + 62223788 62223828 41 GCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCGACA GCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCCAGCGACA < 41bp 1 0.0324841652455198 1 0.0217791199684143 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223808 chr17:62223821 . . 0 34 hm5C_associated_SNPs_23643 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223821 62223821 1 + G C HNSC 62223817 + 62223797 62223837 41 CCCGCGGGCGGCCTTTTTAACCGCGAGCGACAAGAAGTAAC CCCGCGGGCGGCCTTTTTAACCGCCAGCGACAAGAAGTAAC < 41bp 1 0.297867518503482 1 0.162427097558975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223817 chr17:62223821 . . 0 25 hm5C_associated_SNPs_23644 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223821 62223821 1 + G C HNSC 62223827 + 62223807 62223847 41 GCCTTTTTAACCGCGAGCGACAAGAAGTAACCTGACTGTCC GCCTTTTTAACCGCCAGCGACAAGAAGTAACCTGACTGTCC < 41bp 1 0.672467296068542 1 0.330245912075043 experiment 0.655065407862915 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223827 chr17:62223821 . . 0 15 hm5C_associated_SNPs_23645 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr1 26883512 26883512 1 + G A HNSC 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGTCGTGAGATCAAACCACCCTTCAAGCCAGC < 41bp 1 0.107808774291026 1 0.337651193141937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883512 synonymous SNV . 0 24 hm5C_associated_SNPs_23646 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr11 46400012 46400012 1 + G T HNSC 46400025 + 46400005 46400045 41 AGGTGAAGAGCTGATTGAGGCTGCCAAGAGGAACGACTTCT AGGTGAATAGCTGATTGAGGCTGCCAAGAGGAACGACTTCT < 41bp 1 0.148853613496753 1 0.0688655972480774 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46400025 chr11:46400012 stopgain 1.000 0 8 hm5C_associated_SNPs_23647 0 0 1 DDX24 POSTAR2 ENCODE chr11:46400006-46400066
64251 chr11 86518800 86518800 1 + G A HNSC 86518805 + 86518785 86518825 41 GCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAA GCATACCGCCTCCCTATCGTCTTGCCCCAGTCTACCCTCAA < 41bp 1 0.252107188691045 1 0.175014287233353 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518805 chr11:86518800 nonsynonymous SNV 0.991 0 16 hm5C_associated_SNPs_23648 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:86518761-86518807
64251 chr11 63994371 63994371 1 + G T HNSC 63994351 + 63994331 63994371 41 GCCTATTGGCTCTCGGGGGCCACAGCTGCTCCTGCGCCTGG GCCTATTGGCTCTCGGGGGCCACAGCTGCTCCTGCGCCTGT < 41bp 1 0.560734617225697 1 0.186352461576462 experiment 0.878530765548606 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994351 chr11:63994371 nonsynonymous SNV 0.774 4 41 hm5C_associated_SNPs_23649 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr20 47897282 47897282 1 + A G HNSC 47897288 + 47897268 47897308 41 TTGATCTCTACACTATTGGCCAGTTTTGTCTGATGCATTGG TTGATCTCTACACTGTTGGCCAGTTTTGTCTGATGCATTGG < 41bp 1 0.0620820693855751 1 0.109096854925156 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12 ENSG00000212304 ncRNA_exonic Human snoRNA chr20:47897288 chr20:47897282 . . 0 15 hm5C_associated_SNPs_23650 0 0 51 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47897260-47897300
64251 chr3 142841109 142841109 1 + G A HNSC 142841104 + 142841084 142841124 41 GCCACGCAGGCCGCCAATGCCTGGCGGACCGCCCTCACCTT GCCACGCAGGCCGCCAATGCCTGGCAGACCGCCCTCACCTT < 41bp 1 0.778102759177204 1 0.491722673177719 experiment 0.443794481645592 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142841104 chr3:142841109 nonsynonymous SNV 1.000 5 26 hm5C_associated_SNPs_23651 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:142841102-142841149
64251 chr16 70575707 70575707 1 + G A HNSC 70575721 + 70575701 70575741 41 TGAGTTGGACAGCCTCTCTCCCATTCTGTTTTGCCAGGTTG TGAGTTAGACAGCCTCTCTCCCATTCTGTTTTGCCAGGTTG < 41bp 1 0.0378802240669931 1 0.0654820203781128 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70575721 chr16:70575707 synonymous SNV . 0 7 hm5C_associated_SNPs_23652 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:70575678-70575716
64251 chr8 48874211 48874211 1 + T C HNSC 48874231 + 48874211 48874251 41 TTTCCAGCCCTCCCCAAATGCATTCTTCAGGTGCGTGTCTG CTTCCAGCCCTCCCCAAATGCATTCTTCAGGTGCGTGTCTG < 41bp 1 0.0910876436187767 1 0.0322157442569733 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874231 chr8:48874211 nonsynonymous SNV 0.565 1 1 hm5C_associated_SNPs_23653 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr8:48874158-48874225
64251 chr19 15224386 15224386 1 + G A HNSC 15224376 + 15224356 15224396 41 CCTGTCTCCCTTCAGATCCCCGCCTGCCCCGACAATCTCCA CCTGTCTCCCTTCAGATCCCCGCCTGCCCCAACAATCTCCA < 41bp 1 0.239940060997928 1 0.0813676118850708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15224376 chr19:15224386 nonsynonymous SNV 0.001 0 31 hm5C_associated_SNPs_23654 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:15224386-15224414
64251 chr3 158519957 158519957 1 + G A HNSC 158519940 + 158519920 158519960 41 CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATAAGG < 41bp 1 0.4579908252992 1 0.454549342393875 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519940 chr3:158519957 nonsynonymous SNV 0.068 0 38 hm5C_associated_SNPs_23655 0 0 5 DDX3X POSTAR2 ENCODE chr3:158519900-158520009
64251 chr5 21491520 21491520 1 + A G HNSC 21491518 + 21491498 21491538 41 TCAGAAAACAAAGTCGTGGACAACCAGGCTGGGACCCAGGG TCAGAAAACAAAGTCGTGGACAGCCAGGCTGGGACCCAGGG < 41bp 1 0.238487082905927 1 0.123423993587494 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21491518 chr5:21491520 . . 0 23 hm5C_associated_SNPs_23656 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:21491479-21491520
64251 chr11 722485 722485 1 + G A HNSC 722478 + 722458 722498 41 TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTCCC TCCCGAGATGCCGTGGACTTCCTGCGCAGCCACCTGGTCCC < 41bp 1 0.238250833059072 1 0.0949169397354126 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722478 chr11:722485 nonsynonymous SNV 0.237 2 28 hm5C_associated_SNPs_23657 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722470-722502
64251 chr12 27788028 27788028 1 + G C HNSC 27788020 + 27788000 27788040 41 CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA CCCAGATTCAACAGCAGAAACGCTTGTTCAATGGCTTCAGA < 41bp 1 0.320564714734478 1 0.0701539218425751 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27788020 chr12:27788028 nonsynonymous SNV 0.628 2 29 hm5C_associated_SNPs_23658 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27787892-27788054
64251 chr12 104335647 104335647 1 + A T HNSC 104335627 + 104335607 104335647 41 AAGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGCGA AAGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGCGT < 41bp 1 0.326486273248703 1 0.44223827123642 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335627 chr12:104335647 nonsynonymous SNV 0.988 4 41 hm5C_associated_SNPs_23659 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104335617-104335667
64251 chr12 112229161 112229161 1 + G T HNSC 112229155 + 112229135 112229175 41 ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATT ACATTGTGCCTGGATTTGGCCCCACGTCTGGGGCCGCCATT < 41bp 1 0.152524362744852 1 0.0296044051647186 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229155 chr12:112229161 nonsynonymous SNV 0.007 2 27 hm5C_associated_SNPs_23660 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112229161-112229162
64251 chr12 112229161 112229161 1 + G T HNSC 112229156 + 112229136 112229176 41 CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTG CATTGTGCCTGGATTTGGCCCCACGTCTGGGGCCGCCATTG < 41bp 1 0.261809412834105 1 0.0599614977836609 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229156 chr12:112229161 nonsynonymous SNV 0.007 2 26 hm5C_associated_SNPs_23661 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112229161-112229162
64251 chr12 112229161 112229161 1 + G T HNSC 112229157 + 112229137 112229177 41 ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTGC ATTGTGCCTGGATTTGGCCCCACGTCTGGGGCCGCCATTGC < 41bp 1 0.560000932214036 1 0.300073713064194 experiment 0.879998135571928 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229157 chr12:112229161 nonsynonymous SNV 0.007 2 25 hm5C_associated_SNPs_23662 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112229161-112229162
64251 chr12 112229161 112229161 1 + G T HNSC 112229168 + 112229148 112229188 41 ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG ATTTGGCCCCACGTCTGGGGCCGCCATTGCCTCCCATGAGG < 41bp 1 0.150466876205632 1 0.0572701096534729 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229168 chr12:112229161 nonsynonymous SNV 0.007 2 14 hm5C_associated_SNPs_23663 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112229161-112229162
64251 chr12 112229161 112229161 1 + G T HNSC 112229169 + 112229149 112229189 41 TTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGA TTTGGCCCCACGTCTGGGGCCGCCATTGCCTCCCATGAGGA < 41bp 1 0.695657192659609 1 0.312583863735199 experiment 0.608685614680782 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229169 chr12:112229161 nonsynonymous SNV 0.007 2 13 hm5C_associated_SNPs_23664 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112229161-112229162
64251 chr5 131973799 131973799 1 + G A HNSC 131973793 + 131973773 131973813 41 ATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAAT ATATTGAATACATAGAAATACGGTCTAATGCCGATGAAAAT < 41bp 1 0.0878739856598559 1 0.384994029998779 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131973793 chr5:131973799 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_23665 0 0 2 AGGF1 POSTAR2 ENCODE chr5:131973772-131973814
64251 chr10 116698023 116698023 1 + C G HNSC 116698003 + 116697983 116698023 41 CACGATGAAACAGGTCTGGGCTACAAAAGTATGGCCGCTTC CACGATGAAACAGGTCTGGGCTACAAAAGTATGGCCGCTTG < 41bp 1 0.683488527733659 1 0.394188672304153 experiment 0.633022944532682 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116698003 chr10:116698023 nonsynonymous SNV 0.000 1 41 hm5C_associated_SNPs_23666 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr10:116697993-116698025
64251 chr19 12924254 12924254 1 + G T HNSC 12924253 + 12924233 12924273 41 CACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAG CACCGATATTTCCTGGAACGCTGCCTGGAGTCAGCAACCAG < 41bp 1 0.529890559948805 1 0.0946519076824188 experiment 0.94021888010239 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924253 chr19:12924254 nonsynonymous SNV 0.509 1 22 hm5C_associated_SNPs_23667 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:12924230-12924311
64251 chr12 132546772 132546772 1 + C T HNSC 132546776 + 132546756 132546796 41 AACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCT AACGACTCAGGGTGTTTGAGCGGTCACTTCTGTGACAGCCT < 41bp 1 0.0821868772199644 1 0.501779556274414 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546776 chr12:132546772 stopgain 0.990 1 17 hm5C_associated_SNPs_23669 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:132546750-132546784
64251 chr20 30366776 30366776 1 + A G HNSC 30366771 + 30366751 30366791 41 AACAGATATCATTTGAGGAGCAAGAAGGATGATATTAGTAA AACAGATATCATTTGAGGAGCAAGAGGGATGATATTAGTAA < 41bp 1 0.559487816329075 1 0.432372808456421 experiment 0.88102436734185 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30366771 chr20:30366776 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_23670 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:30366735-30366784
64251 chr2 85133166 85133166 1 + G A HNSC 85133155 + 85133135 85133175 41 TAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCA TAAGAAAATGGCAGACAAACCAGACATGGGGAAAATCGCCA < 41bp 1 0.443666571702849 1 0.118658393621445 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMSB10 ENSG00000034510 CDS Human protein_coding chr2:85133155 chr2:85133166 nonsynonymous SNV 0.999 2 32 hm5C_associated_SNPs_23673 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85133138-85133216
64251 chr1 36315806 36315806 1 + A G HNSC 36315787 + 36315767 36315807 41 AGTGGCAATGTACCAGCAGGCACTACAGTGGATAGTACCAT AGTGGCAATGTACCAGCAGGCACTACAGTGGATAGTACCGT < 41bp 1 0.337022420499874 1 0.204346001148224 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO4 ENSG00000134698 CDS Human protein_coding chr1:36315787 chr1:36315806 nonsynonymous SNV 0.998 0 40 hm5C_associated_SNPs_23674 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585670 chr1:36315778-36315820
64251 chr1 218504373 218504373 1 + C A HNSC 218504390 + 218504370 218504410 41 GGACAAGGAAAGTGATGGGCCAGATGACAGCAGACCAGAAT GGAAAAGGAAAGTGATGGGCCAGATGACAGCAGACCAGAAT < 41bp 1 0.407971990465249 1 0.575928151607513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218504390 chr1:218504373 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_23675 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:218504302-218504377
64251 chr6 130381238 130381238 1 + G T HNSC 130381222 + 130381202 130381242 41 AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGA AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCTTGGA < 41bp 1 0.467675556755397 1 0.280316114425659 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381222 chr6:130381238 nonsynonymous SNV 0.907 3 37 hm5C_associated_SNPs_23678 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr12 101012273 101012273 1 + G C HNSC 101012291 + 101012271 101012311 41 TTGAGTTAGAAGAGACTTTGCTTAATACTTCTGGGCCTGAA TTCAGTTAGAAGAGACTTTGCTTAATACTTCTGGGCCTGAA < 41bp 1 0.53754493911855 1 0.428421705961227 experiment 0.9249101217629 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101012291 chr12:101012273 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_23679 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:101012270-101012297
64251 chr13 50586100 50586100 1 + C G HNSC 50586083 + 50586063 50586103 41 TCTGGTAGGATGTGATGGAGCTGCTTGAAGAAGATCTCACA TCTGGTAGGATGTGATGGAGCTGCTTGAAGAAGATCTGACA < 41bp 1 0.380396647188502 1 0.0578592717647552 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM13 ENSG00000204977 CDS Human protein_coding chr13:50586083 chr13:50586100 synonymous SNV . 0 38 hm5C_associated_SNPs_23680 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr13:50586069-50586104
64251 chr11 75508295 75508295 1 + G C HNSC 75508290 + 75508270 75508310 41 CATCATCGTGGTCGGGGGTGCGGCTGAGTCTCTGAGCTCCA CATCATCGTGGTCGGGGGTGCGGCTCAGTCTCTGAGCTCCA < 41bp 1 0.381685210910685 1 0.237920820713043 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75508290 chr11:75508295 nonsynonymous SNV 0.997 4 26 hm5C_associated_SNPs_23681 0 0 1 RPS3 POSTAR2 ENCODE chr11:75508259-75508328
64251 chrX 73044042 73044042 1 - G C HNSC 73044044 - 73044024 73044064 41 GTTATCTATTGTGTGCCAATCTCATTGCTAGGCATTGGGGA GTTATCTATTGTGTGCCAATCTGATTGCTAGGCATTGGGGA < 41bp 1 0.142175337932545 1 0.227012425661087 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044044 chrX:73044042 . . 0 23 hm5C_associated_SNPs_23682 0 0 40 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr3 183882067 183882067 1 + G A HNSC 183882074 + 183882054 183882094 41 GCTGGTGTCAGCTGAGGGCTCACACCCAGACCCAGCCCCCT GCTGGTGTCAGCTAAGGGCTCACACCCAGACCCAGCCCCCT < 41bp 1 0.203788309907946 1 0.0501206815242767 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882074 chr3:183882067 nonsynonymous SNV 0.976 2 14 hm5C_associated_SNPs_23683 0 0 6 DDX24 POSTAR2 ENCODE chr3:183882052-183882107
64251 chr1 228566495 228566495 1 + G A HNSC 228566484 + 228566464 228566504 41 TACAAGAGGCACAACCTGGCCCAGGTGCGCTGAGGGTCGCC TACAAGAGGCACAACCTGGCCCAGGTGCGCTAAGGGTCGCC < 41bp 1 0.112214215356911 1 0.677424311637878 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228566484 chr1:228566495 synonymous SNV . 0 32 hm5C_associated_SNPs_23686 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228566479-228566512
64251 chr17 79080653 79080653 1 + G T HNSC 79080643 + 79080623 79080663 41 CGCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCT CGCCGCCTCCCGGGCCTTCCCCGCCCAGACTGCCAGCGGCT < 41bp 1 0.395245401309874 1 0.209671437740326 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080643 chr17:79080653 synonymous SNV . 0 31 hm5C_associated_SNPs_23687 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr17 79080653 79080653 1 + G T HNSC 79080644 + 79080624 79080664 41 GCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCTT GCCGCCTCCCGGGCCTTCCCCGCCCAGACTGCCAGCGGCTT < 41bp 1 0.540487006069488 1 0.120441198348999 experiment 0.919025987861024 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080644 chr17:79080653 synonymous SNV . 0 30 hm5C_associated_SNPs_23688 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr6 25983648 25983648 1 + G A HNSC 25983632 + 25983612 25983652 41 GGAAAATGTGCAGAGGGGCACTGGCATGAAGCAAGAGCCTC GGAAAATGTGCAGAGGGGCACTGGCATGAAGCAAGAACCTC < 41bp 1 0.524056277739931 1 0.237971395254135 experiment 0.951887444520138 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983632 chr6:25983648 synonymous SNV . 0 37 hm5C_associated_SNPs_23689 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:25983622-25983683
64251 chr19 34859488 34859488 1 + G T HNSC 34859485 + 34859465 34859505 41 TATATCCTGACCGTAATCCCCAGGGTCGAGCCGTGCTGCAC TATATCCTGACCGTAATCCCCAGTGTCGAGCCGTGCTGCAC < 41bp 1 0.330550036443258 1 0.221190065145493 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34859485 chr19:34859488 nonsynonymous SNV 0.018 3 24 hm5C_associated_SNPs_23691 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34859480-34859500
64251 chr1 183519946 183519946 1 + C G HNSC 183519963 + 183519943 183519983 41 GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC GCTGTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC < 41bp 1 0.37446648568898 1 0.15685510635376 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519963 chr1:183519946 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_23692 0 0 18 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr1 39908187 39908187 1 + G C HNSC 39908204 + 39908184 39908224 41 AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGAG AGACACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGAG < 41bp 1 0.0565123405318971 1 0.256118655204773 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39908204 chr1:39908187 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_23693 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39908132-39908231
64251 chr11 67047151 67047151 1 + G C HNSC 67047163 + 67047143 67047183 41 AGAAGCAGGTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC AGAAGCAGCTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC < 41bp 1 0.138342751673263 1 0.422125726938248 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047163 chr11:67047151 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_23695 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr19 46198710 46198710 1 + C T HNSC 46198713 + 46198693 46198733 41 AGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGG AGTTCCTGGAGGCCACGTTGCGGTCCCTGACAGCAGGTTGG < 41bp 1 0.210182962849258 1 0.547072350978851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198713 chr19:46198710 synonymous SNV . 0 18 hm5C_associated_SNPs_23696 0 0 2 DDX59 POSTAR2 ENCODE chr19:46198669-46198730
64251 chr14 89069315 89069315 1 + C G HNSC 89069326 + 89069306 89069346 41 CTGCAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACCCA CTGCAGCCTGAAACAAGGGACTCAGAGGTCTCCTCCACCCA < 41bp 1 0.48757307449876 1 0.169774025678635 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89069326 chr14:89069315 stopgain 1.000 0 10 hm5C_associated_SNPs_23697 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr14:89069298-89069320
64251 chr11 45832798 45832798 1 + C G HNSC 45832817 + 45832797 45832837 41 GCCTACACCTGGGTCAGGGGCTGGGAGATGAAGAAGACTCC GGCTACACCTGGGTCAGGGGCTGGGAGATGAAGAAGACTCC < 41bp 1 0.597438582487821 1 0.651301145553589 experiment 0.805122835024358 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832817 chr11:45832798 nonsynonymous SNV 0.992 1 2 hm5C_associated_SNPs_23698 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:45832775-45832831
64251 chr22 46712087 46712087 1 + G C HNSC 46712102 + 46712082 46712122 41 TTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCA TTTCTCAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCA < 41bp 1 0.590828104993814 1 0.358223140239716 experiment 0.818343790012372 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712102 chr22:46712087 nonsynonymous SNV 0.001 0 6 hm5C_associated_SNPs_23699 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:46712047-46712096
64251 chr1 220279318 220279318 1 + G T HNSC 220279315 + 220279295 220279335 41 TTACCTGCAAATCATGTGACCATGGCAAAAGGAACGGGATT TTACCTGCAAATCATGTGACCATTGCAAAAGGAACGGGATT < 41bp 1 0.0485292740003557 1 0.185761004686356 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IARS2 ENSG00000067704 CDS Human protein_coding chr1:220279315 chr1:220279318 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_23700 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220279280-220279323
64251 chr9 37486777 37486777 1 + C T HNSC 37486792 + 37486772 37486812 41 CCAACCCCAGGAAGAGGAATCAACGGATCCTGGTAAGTGAA CCAACTCCAGGAAGAGGAATCAACGGATCCTGGTAAGTGAA < 41bp 1 0.559878346421916 1 0.721273899078369 experiment 0.880243307156167 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486792 chr9:37486777 nonsynonymous SNV 0.917 4 6 hm5C_associated_SNPs_23701 0 0 2 BUD13 POSTAR2 ENCODE chr9:37486763-37486795
64251 chr4 3101073 3101073 1 + G A HNSC 3101067 + 3101047 3101087 41 TTTCTGCTGTGCAGTGATGACGCAGAGTCAGATGTCAGGAT TTTCTGCTGTGCAGTGATGACGCAGAATCAGATGTCAGGAT < 41bp 1 0.378511858584568 1 0.362113922834396 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3101067 chr4:3101073 synonymous SNV . 0 27 hm5C_associated_SNPs_23702 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:3101047-3101073
64251 chr3 12616417 12616417 1 + G C HNSC 12616427 + 12616407 12616447 41 GAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACT GAGGAGATTTCGGATTCTCTCCAATTGCAATCACACGTACT < 41bp 1 0.246314245105705 1 0.344011425971985 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12616427 chr3:12616417 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_23706 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:12616410-12616433
64251 chr9 35389887 35389887 1 + C A HNSC 35389874 + 35389854 35389894 41 ACCTCCAGAGGAACAAGGGCCCAGCATTCGGAACCTGGATT ACCTCCAGAGGAACAAGGGCCCAGCATTCGGAAACTGGATT < 41bp 1 0.0584235889096742 1 0.163974344730377 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UNC13B ENSG00000198722 CDS Human protein_coding chr9:35389874 chr9:35389887 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_23707 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:35389867-35389893
64251 chr11 117152363 117152363 1 + G A HNSC 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGAGGAACGGAGCCAAGCTAAGCAGCCT < 41bp 1 0.548346804285917 1 0.609443843364716 experiment 0.903306391428166 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152363 synonymous SNV . 0 33 hm5C_associated_SNPs_23708 0 0 1 DDX24 POSTAR2 ENCODE chr11:117152355-117152393
64251 chr2 179247226 179247226 1 + C T HNSC 179247214 + 179247194 179247234 41 TGAAGACAACACCAGTGTTGCAGACAATATTTCTCGGCAAA TGAAGACAACACCAGTGTTGCAGACAATATTTTTCGGCAAA < 41bp 1 0.10596168524808 1 0.154042541980743 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OSBPL6 ENSG00000079156 CDS Human protein_coding chr2:179247214 chr2:179247226 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_23710 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:179247201-179247239
64251 chr7 150773105 150773105 1 + G A HNSC 150773103 + 150773083 150773123 41 CTGTCTCCGCCCCCCAGGTCCGGACCCTCCGTATGCACCTG CTGTCTCCGCCCCCCAGGTCCGAACCCTCCGTATGCACCTG < 41bp 1 0.179973939365223 1 0.102335602045059 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773103 chr7:150773105 synonymous SNV . 0 23 hm5C_associated_SNPs_23712 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:150773097-150773123
64251 chr4 1941403 1941403 1 + A G HNSC 1941384 + 1941364 1941404 41 CCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATGCAT CCAAAATTATTTTACAGCAACGAAAAATCTGTCTGATGCGT < 41bp 1 0.233946921917771 1 0.412023961544037 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1941384 chr4:1941403 nonsynonymous SNV . 0 40 hm5C_associated_SNPs_23713 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:1941375-1941525
64251 chr14 71444274 71444274 1 + C G HNSC 71444269 + 71444249 71444289 41 AGCTATAAAAGTGAGCAGACCAGCTCAACTCACATAGAGAG AGCTATAAAAGTGAGCAGACCAGCTGAACTCACATAGAGAG < 41bp 1 0.258614218252384 1 0.208748757839203 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444269 chr14:71444274 stopgain 0.852 1 26 hm5C_associated_SNPs_23714 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:71444236-71444274
64251 chr5 176709508 176709508 1 + G T HNSC 176709496 + 176709476 176709516 41 TGAATGAGTATGTGGGTGAGCTTATAGATGAAGAAGAATGC TGAATGAGTATGTGGGTGAGCTTATAGATGAATAAGAATGC < 41bp 1 0.0358735243980727 1 0.0368396937847137 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176709496 chr5:176709508 stopgain 1.000 1 33 hm5C_associated_SNPs_23715 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:176709472-176709522
64251 chrX 70514351 70514351 1 + G A HNSC 70514364 + 70514344 70514384 41 GACAGATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT GACAGATACAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT < 41bp 1 0.0863675451954383 1 0.0980836749076843 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70514364 chrX:70514351 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_23716 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70514338-70514359
64251 chr17 7160292 7160292 1 + G T HNSC 7160303 + 7160283 7160323 41 ACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCT ACCCTGGGCTGTACCATGGGCCAGGCCTCGGCCCACATCCT < 41bp 1 0.434857710798564 1 0.129424393177032 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160303 chr17:7160292 nonsynonymous SNV 0.043 3 10 hm5C_associated_SNPs_23717 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr17 7160292 7160292 1 + G T HNSC 7160304 + 7160284 7160324 41 CCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTG CCCTGGGCTGTACCATGGGCCAGGCCTCGGCCCACATCCTG < 41bp 1 0.667140184603239 1 0.56186830997467 experiment 0.665719630793522 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160304 chr17:7160292 nonsynonymous SNV 0.043 3 9 hm5C_associated_SNPs_23718 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chrX 129149413 129149413 1 + C T HNSC 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAATCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC < 41bp 1 0.0259432402063829 1 0.132691204547882 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149413 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_23719 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149400-129149420
64251 chr17 30692368 30692368 1 + A T HNSC 30692372 + 30692352 30692392 41 TGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT TGCCCCCACCTGTTCCTCGTCCTGGAATTCCTCCAATGACT < 41bp 1 0.270611629895325 1 0.301835119724274 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692372 chr17:30692368 synonymous SNV . 0 17 hm5C_associated_SNPs_23722 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr17 30692368 30692368 1 + A T HNSC 30692381 + 30692361 30692401 41 CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAG CTGTTCCTCGTCCTGGAATTCCTCCAATGACTCAAGCACAG < 41bp 1 0.133093846185874 1 0.447373569011688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692381 chr17:30692368 synonymous SNV . 0 8 hm5C_associated_SNPs_23723 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr15 44085881 44085881 1 + C A HNSC 44085898 + 44085878 44085918 41 CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGA CTCACAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGA < 41bp 1 0.282237792475675 1 0.0457623600959778 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085898 chr15:44085881 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_23724 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:44085861-44085893
64251 chr19 41307129 41307129 1 + C T HNSC 41307114 + 41307094 41307134 41 TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTGGGCGCCTG TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTGGGTGCCTG < 41bp 1 0.763912403047242 1 0.928768455982208 experiment 0.472175193905516 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41307114 chr19:41307129 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_23725 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:41307117-41307154
64251 chr6 163984541 163984541 1 + C T HNSC 163984557 + 163984537 163984577 41 CCTGCGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT CCTGTGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT < 41bp 1 0.391937227859411 1 0.167358607053757 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QKI ENSG00000112531 CDS Human protein_coding chr6:163984557 chr6:163984541 nonsynonymous SNV 0.999 2 5 hm5C_associated_SNPs_23726 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:163984498-163984552
64251 chr19 39870622 39870622 1 + A G HNSC 39870630 + 39870610 39870650 41 TCACGGAGACGCAGAAGAAACGGCTGCTATCCTGGAAACAG TCACGGAGACGCGGAAGAAACGGCTGCTATCCTGGAAACAG < 41bp 1 0.728469650241268 1 0.51733535528183 experiment 0.543060699517463 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39870630 chr19:39870622 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_23727 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:39870622-39870623
64251 chr11 763813 763813 1 + G A HNSC 763823 + 763803 763843 41 ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAA ATTGTCATGGACGCCTCCTTCCGCAACACGGGCGAGATCAA < 41bp 1 0.758430971140363 1 0.771373271942139 experiment 0.483138057719275 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:763823 chr11:763813 nonsynonymous SNV 0.999 5 11 hm5C_associated_SNPs_23728 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:763796-763828
64251 chr6 26022048 26022048 1 + T C HNSC 26022042 + 26022022 26022062 41 CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTAC CCCGGCGTGGCGGTGTGAAGCGGATCCCTGGTCTGATCTAC < 41bp 1 0.77163385720583 1 0.782506108283997 experiment 0.45673228558834 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022042 chr6:26022048 nonsynonymous SNV 0.921 0 27 hm5C_associated_SNPs_23729 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022048 26022048 1 + T C HNSC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGGTGTGAAGCGGATCCCTGGTCTGATCTACGAGGA < 41bp 1 0.478931114380659 1 0.188713371753693 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022048 nonsynonymous SNV 0.921 0 22 hm5C_associated_SNPs_23730 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr2 162091951 162091951 1 + A G HNSC 162091953 + 162091933 162091973 41 AGTATGTGAATTCTGTCAAGCAGTTTTCCCACCATCCATTA AGTATGTGAATTCTGTCAGGCAGTTTTCCCACCATCCATTA < 41bp 1 0.442820826938938 1 0.0297448337078094 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TANK ENSG00000136560 CDS Human protein_coding chr2:162091953 chr2:162091951 synonymous SNV . 0 19 hm5C_associated_SNPs_23731 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:162091940-162091960
64251 chrX 70787355 70787355 1 + G A HNSC 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATTCTAAAGCGTGTTCCCAATAGTGTACTC < 41bp 1 0.251349263637792 1 0.078940361738205 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787355 synonymous SNV . 0 17 hm5C_associated_SNPs_23732 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr1 12030858 12030858 1 + C T HNSC 12030850 + 12030830 12030870 41 TTGCGCCCATGACGGAGAAGCTCTACCCCGGCTACTACACC TTGCGCCCATGACGGAGAAGCTCTACCCTGGCTACTACACC < 41bp 1 0.382021099804621 1 0.249313980340958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12030850 chr1:12030858 synonymous SNV . 0 29 hm5C_associated_SNPs_23733 0 0 1 RPS3 POSTAR2 ENCODE chr1:12030848-12030871
64251 chr6 33380521 33380521 1 + G C HNSC 33380523 + 33380503 33380543 41 TTGTGTCTGTCGCTCTGAGACTGTGGTCCCTGGGAACCGGC TTGTGTCTGTCGCTCTGACACTGTGGTCCCTGGGAACCGGC < 41bp 1 0.474828755790475 1 0.0696415305137634 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF1 ENSG00000112511 CDS Human protein_coding chr6:33380523 chr6:33380521 nonsynonymous SNV 0.999 1 19 hm5C_associated_SNPs_23734 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:33380519-33380540
64251 chr12 53849719 53849719 1 + C T HNSC 53849736 + 53849716 53849756 41 TATCACTTTGGCTGGACCCACTAATGCCATCTTCAAAGCCT TATTACTTTGGCTGGACCCACTAATGCCATCTTCAAAGCCT < 41bp 1 0.315226622259773 1 0.104443222284317 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53849736 chr12:53849719 synonymous SNV . 0 4 hm5C_associated_SNPs_23735 0 0 74 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53849700-53849720
64251 chr11 9459832 9459832 1 + G A HNSC 9459830 + 9459810 9459850 41 AGCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGG AGCTGAAGATGATGATGAAACCAGTAAGGGATTTTCAATGG < 41bp 1 0.442182284424396 1 0.139099270105362 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459830 chr11:9459832 nonsynonymous SNV 0.717 1 23 hm5C_associated_SNPs_23736 0 0 5 LIN28B POSTAR2 ENCODE chr11:9459811-9459832
64251 chr11 9459832 9459832 1 + G A HNSC 9459831 + 9459811 9459851 41 GCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGGA GCTGAAGATGATGATGAAACCAGTAAGGGATTTTCAATGGA < 41bp 1 0.683142427944159 1 0.336188673973083 experiment 0.633715144111682 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459831 chr11:9459832 nonsynonymous SNV 0.717 1 22 hm5C_associated_SNPs_23737 0 0 5 LIN28B POSTAR2 ENCODE chr11:9459811-9459832
64251 chr19 4499579 4499579 1 + A G HNSC 4499598 + 4499578 4499618 41 GAGGCGGTGCAGAAAGTGAACAAGGCTGGGATGGAGAAGGA GGGGCGGTGCAGAAAGTGAACAAGGCTGGGATGGAGAAGGA < 41bp 1 0.778188775772585 1 0.823489189147949 experiment 0.443622448454829 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4499598 chr19:4499579 nonsynonymous SNV 0.031 1 2 hm5C_associated_SNPs_23738 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4499570-4499598
64251 chr7 98609784 98609784 1 + G T HNSC 98609794 + 98609774 98609814 41 TCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC TCTCTCGGCCTCCGGGCAGCCAGAGAACATGGACAGCCAGC < 41bp 1 0.304777064839248 1 0.889688372612 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98609794 chr7:98609784 nonsynonymous SNV 0.022 1 11 hm5C_associated_SNPs_23739 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98609763-98609796
64251 chr16 30960744 30960744 1 + C G HNSC 30960753 + 30960733 30960773 41 CAGTCAGCACTCGCTGCGGGCGCTCAGCTGGCGCCGCCTCT CAGTCAGCACTGGCTGCGGGCGCTCAGCTGGCGCCGCCTCT < 41bp 1 0.158272581162563 1 0.0651813149452209 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960753 chr16:30960744 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_23740 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30960713-30960759
64251 chr16 30960744 30960744 1 + C G HNSC 30960757 + 30960737 30960777 41 CAGCACTCGCTGCGGGCGCTCAGCTGGCGCCGCCTCTACCT CAGCACTGGCTGCGGGCGCTCAGCTGGCGCCGCCTCTACCT < 41bp 1 0.748256647415243 1 0.8041090965271 experiment 0.503486705169514 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960757 chr16:30960744 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_23741 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30960713-30960759
64251 chr1 33237324 33237324 1 + C T HNSC 33237305 + 33237285 33237325 41 TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCTC < 41bp 1 0.382508091393076 1 0.663178741931915 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237305 chr1:33237324 synonymous SNV . 0 40 hm5C_associated_SNPs_23743 0 0 2 HNRNPK POSTAR2 ENCODE chr1:33237239-33237360
64251 chr7 150933597 150933597 1 + G T HNSC 150933611 + 150933591 150933631 41 CCGAAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGC CCGAAGTTACCCTCATGTACCGGCTCCACAAACGCTTCAGC < 41bp 1 0.325457400831817 1 0.541434347629547 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933611 chr7:150933597 nonsynonymous SNV 0.990 1 7 hm5C_associated_SNPs_23744 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr7:150933567-150933603
64251 chr7 150933597 150933597 1 + G T HNSC 150933614 + 150933594 150933634 41 AAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCT AAGTTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCT < 41bp 1 0.388432688849233 1 0.923477649688721 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933614 chr7:150933597 nonsynonymous SNV 0.990 1 4 hm5C_associated_SNPs_23745 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr7:150933567-150933603
64251 chr7 150933597 150933597 1 + G T HNSC 150933616 + 150933596 150933636 41 GGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCTCT GTTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCTCT < 41bp 1 0.262814593461245 1 0.16693851351738 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933616 chr7:150933597 nonsynonymous SNV 0.990 1 2 hm5C_associated_SNPs_23746 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr7:150933567-150933603
64251 chr2 224824372 224824372 1 + G A HNSC 224824387 + 224824367 224824407 41 AAAGTGAGGAGGCCAAACGCCAACAACTTGGGATAGAGAAA AAAGTAAGGAGGCCAAACGCCAACAACTTGGGATAGAGAAA < 41bp 1 0.571846093746584 1 0.419499188661575 experiment 0.856307812506832 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824387 chr2:224824372 nonsynonymous SNV 0.979 4 6 hm5C_associated_SNPs_23747 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:224824348-224824385
64251 chr7 135328051 135328051 1 + A T HNSC 135328068 + 135328048 135328088 41 GACAGAGTGTCAGCAAGCTACAAAATGTAGAGCAGCTTCCC GACTGAGTGTCAGCAAGCTACAAAATGTAGAGCAGCTTCCC < 41bp 1 0.468528112051728 1 0.188907444477081 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328068 chr7:135328051 nonsynonymous SNV 0.979 1 4 hm5C_associated_SNPs_23748 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:135328012-135328103
64251 chr9 110073972 110073972 1 + T C HNSC 110073977 + 110073957 110073997 41 TTGTAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTG TTGTAGTACATCGGGCGATTCTTCTCGGTCAAACCTTTTTG < 41bp 1 0.153295475594236 1 0.0990540087223053 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110073977 chr9:110073972 synonymous SNV . 0 16 hm5C_associated_SNPs_23749 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:110073960-110073980
64251 chr9 131088088 131088088 1 + C G HNSC 131088068 + 131088048 131088088 41 TGCCTTTCAGGGAGCGTCCCCGGATTTCGACATCCACCCTC TGCCTTTCAGGGAGCGTCCCCGGATTTCGACATCCACCCTG < 41bp 1 0.768175233539309 1 0.516229569911957 experiment 0.463649532921382 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ4 ENSG00000167113 CDS Human protein_coding chr9:131088068 chr9:131088088 synonymous SNV . 0 41 hm5C_associated_SNPs_23750 0 0 5 BUD13 POSTAR2 ENCODE chr9:131088038-131088167
64251 chr6 30547713 30547713 1 + A G HNSC 30547729 + 30547709 30547749 41 CCGTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG CCGTGTCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG < 41bp 1 0.0692655501069853 1 0.0719242990016937 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547729 chr6:30547713 synonymous SNV . 0 5 hm5C_associated_SNPs_23752 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr6:30547674-30547725
64251 chr17 73489130 73489130 1 + G T HNSC 73489149 + 73489129 73489169 41 CGGCGGCCTCCCCTCAGCCACATGATCAGCCTCTTCATTAA CTGCGGCCTCCCCTCAGCCACATGATCAGCCTCTTCATTAA < 41bp 1 0.489856749378713 1 0.109845280647278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73489149 chr17:73489130 nonsynonymous SNV 0.990 3 2 hm5C_associated_SNPs_23754 0 0 1 SRSF7 POSTAR2 ENCODE chr17:73489077-73489131
64251 chr17 7983186 7983186 1 + C G HNSC 7983202 + 7983182 7983222 41 GGATCAGGCCGGGGTTGACGCCGTTGAGGTACTGGTACCCA GGATGAGGCCGGGGTTGACGCCGTTGAGGTACTGGTACCCA < 41bp 1 0.439066543262344 1 0.325142800807953 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALOX12B ENSG00000179477 CDS Human protein_coding chr17:7983202 chr17:7983186 synonymous SNV . 0 5 hm5C_associated_SNPs_23755 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:7983185-7983186
64251 chr2 99156097 99156097 1 + C A HNSC 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCACGGCAGT < 41bp 1 0.297370427870052 1 0.810474693775177 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156097 synonymous SNV . 0 34 hm5C_associated_SNPs_23757 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr20 60881334 60881334 1 + G T HNSC 60881329 + 60881309 60881349 41 CAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA CAACCCCCCGATGCCTGGGGCGCTGTGGGCCAGCGGAAGCA < 41bp 1 0.216726070605381 1 0.324277430772781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881329 chr20:60881334 nonsynonymous SNV 0.062 4 26 hm5C_associated_SNPs_23761 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr20:60881319-60881340
64251 chr20 60881334 60881334 1 + G T HNSC 60881331 + 60881311 60881351 41 ACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCAGC ACCCCCCGATGCCTGGGGCGCTGTGGGCCAGCGGAAGCAGC < 41bp 1 0.463326396668795 1 0.145142734050751 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881331 chr20:60881334 nonsynonymous SNV 0.062 4 24 hm5C_associated_SNPs_23762 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr20:60881319-60881340
64251 chr6 144875972 144875972 1 + C G HNSC 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TGTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA < 41bp 1 0.225156506534659 1 0.344850599765778 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144875972 synonymous SNV . 0 2 hm5C_associated_SNPs_23763 0 0 1 LIN28B POSTAR2 ENCODE chr6:144875953-144876006
64251 chr9 100079383 100079383 1 + C G HNSC 100079373 + 100079353 100079393 41 AACTATGCCCTGCTGGGCAACCGGAAGGCTCTCGCCCAGCT AACTATGCCCTGCTGGGCAACCGGAAGGCTGTCGCCCAGCT < 41bp 1 0.656613038600738 1 0.657958030700684 experiment 0.686773922798524 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100079373 chr9:100079383 nonsynonymous SNV 0.956 0 31 hm5C_associated_SNPs_23764 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:100079380-100079400
64251 chr10 51584772 51584772 1 + C G HNSC 51584778 + 51584758 51584798 41 AAAAGGTTGGAGATCAAGAGCTTCCTGATCAAGATGAGATG AAAAGGTTGGAGATGAAGAGCTTCCTGATCAAGATGAGATG < 41bp 1 0.0984955399642646 1 0.0541867911815643 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCOA4 ENSG00000138293 CDS Human other chr10:51584778 chr10:51584772 nonsynonymous SNV . 0 15 hm5C_associated_SNPs_23767 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:51584741-51584781
64251 chr5 72187641 72187641 1 + A G HNSC 72187646 + 72187626 72187666 41 ATTGTAAATAGGAATATATTCAGATGCTAATGCCTCCACTG ATTGTAAATAGGAATGTATTCAGATGCTAATGCCTCCACTG < 41bp 1 0.613616301347868 1 0.86452978849411 experiment 0.772767397304263 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187646 chr5:72187641 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_23768 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:72187610-72187648
64251 chr5 72187641 72187641 1 + A G HNSC 72187652 + 72187632 72187672 41 AATAGGAATATATTCAGATGCTAATGCCTCCACTGATCCAG AATAGGAATGTATTCAGATGCTAATGCCTCCACTGATCCAG < 41bp 1 0.26745839516255 1 0.0864552855491638 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187652 chr5:72187641 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_23769 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:72187610-72187648
64251 chr5 72187641 72187641 1 + A G HNSC 72187658 + 72187638 72187678 41 AATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGG AATGTATTCAGATGCTAATGCCTCCACTGATCCAGAAATGG < 41bp 1 0.0170780230481543 1 0.235787063837051 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187658 chr5:72187641 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_23770 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:72187610-72187648
64251 chr5 72187641 72187641 1 + A G HNSC 72187659 + 72187639 72187679 41 ATATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGA ATGTATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGA < 41bp 1 0.436256760157826 1 0.890514016151428 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187659 chr5:72187641 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_23771 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:72187610-72187648
64251 chr5 72187641 72187641 1 + A G HNSC 72187661 + 72187641 72187681 41 ATATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAAC GTATTCAGATGCTAATGCCTCCACTGATCCAGAAATGGAAC < 41bp 1 0.0883010635645194 1 0.0791474878787994 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72187661 chr5:72187641 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_23772 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:72187610-72187648
64251 chr22 38209492 38209492 1 + C T HNSC 38209473 + 38209453 38209493 41 TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGACGCA TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGACGTA < 41bp 1 0.378983499707573 1 0.0408859550952911 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCAT ENSG00000100116 CDS Human protein_coding chr22:38209473 chr22:38209492 nonsynonymous SNV 0.344 5 40 hm5C_associated_SNPs_23773 0 0 3 BUD13 POSTAR2 ENCODE chr22:38209412-38209496
64251 chr7 150737355 150737355 1 + G T HNSC 150737364 + 150737344 150737384 41 TTTTCTGACAGGTCCATGGCCAACCTCTCTGTCCTGTTTGG TTTTCTGACAGTTCCATGGCCAACCTCTCTGTCCTGTTTGG < 41bp 1 0.124850493265311 1 0.0283587574958801 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150737364 chr7:150737355 nonsynonymous SNV 0.965 2 12 hm5C_associated_SNPs_23774 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr7:150737340-150737360
64251 chr14 39650863 39650863 1 + G T HNSC 39650849 + 39650829 39650869 41 GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGG GACATAATAGAGATAGAAAGCACAGAAGGAGCGTTGATCGG < 41bp 1 0.7356789234391 1 0.164506107568741 experiment 0.5286421531218 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650849 chr14:39650863 synonymous SNV . 0 35 hm5C_associated_SNPs_23777 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr1 36755247 36755247 1 + G T HNSC 36755232 + 36755212 36755252 41 AGAAAAGCTCATCACCTCCCCCAAGAAAGACCTCTGAGAGC AGAAAAGCTCATCACCTCCCCCAAGAAAGACCTCTTAGAGC < 41bp 1 0.178558202962095 1 0.740719258785248 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755232 chr1:36755247 stopgain 1.000 1 36 hm5C_associated_SNPs_23779 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:36755215-36755274
64251 chr3 184104641 184104641 1 + G A HNSC 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACGAACAGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA < 41bp 1 0.756269317916352 1 0.754326164722443 experiment 0.487461364167297 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104641 synonymous SNV . 0 7 hm5C_associated_SNPs_23780 0 0 2 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr17 30321584 30321584 1 + A G HNSC 30321586 + 30321566 30321606 41 TTACATTTTTGTTGCAGTATCATCCAAAAGGTGCTAGGATA TTACATTTTTGTTGCAGTGTCATCCAAAAGGTGCTAGGATA < 41bp 1 0.0775833687547708 1 0.178715616464615 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30321586 chr17:30321584 nonsynonymous SNV 0.996 1 19 hm5C_associated_SNPs_23782 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:30321580-30321600
64251 chr19 42373230 42373230 1 + G A HNSC 42373215 + 42373195 42373235 41 CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGG CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCACCGGG < 41bp 1 0.259732072217287 1 0.197692215442657 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373215 chr19:42373230 nonsynonymous SNV 0.966 2 36 hm5C_associated_SNPs_23783 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373230 42373230 1 + G A HNSC 42373228 + 42373208 42373248 41 CGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT CGAGGCTCCAAGAGTGTGGCCCACCGGGTCCTCCAAGCCCT < 41bp 1 0.17498399727765 1 0.0383783578872681 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373228 chr19:42373230 nonsynonymous SNV 0.966 2 23 hm5C_associated_SNPs_23784 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373230 42373230 1 + G A HNSC 42373231 + 42373211 42373251 41 GGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGA GGCTCCAAGAGTGTGGCCCACCGGGTCCTCCAAGCCCTGGA < 41bp 1 0.656725004053571 1 0.644806385040283 experiment 0.686549991892857 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373231 chr19:42373230 nonsynonymous SNV 0.966 2 20 hm5C_associated_SNPs_23785 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373230 42373230 1 + G A HNSC 42373237 + 42373217 42373257 41 AAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCT AAGAGTGTGGCCCACCGGGTCCTCCAAGCCCTGGAGGGGCT < 41bp 1 0.0428760385724925 1 0.0668787360191345 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373237 chr19:42373230 nonsynonymous SNV 0.966 2 14 hm5C_associated_SNPs_23786 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr18 29116334 29116334 1 + C G HNSC 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTGTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA < 41bp 1 0.140548337161618 1 0.100990951061249 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116334 nonsynonymous SNV 0.581 4 5 hm5C_associated_SNPs_23787 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr18 29116334 29116334 1 + C G HNSC 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA GTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.474164338837356 1 0.132568359375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116334 nonsynonymous SNV 0.581 4 1 hm5C_associated_SNPs_23788 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr17 38512358 38512358 1 + G A HNSC 38512361 + 38512341 38512381 41 GAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGG GAGGGCCTGGACACTCTAAGCGGACAGCCGGGGGGTGGGGG < 41bp 1 0.436069664271756 1 0.710037887096405 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RARA ENSG00000131759 CDS Human protein_coding chr17:38512361 chr17:38512358 synonymous SNV . 0 18 hm5C_associated_SNPs_23789 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:38512323-38512384
64251 chr10 75542190 75542190 1 + G C HNSC 75542205 + 75542185 75542225 41 GCCGCGAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTTT GCCGCCAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTTT < 41bp 1 0.735014929772123 1 0.723623991012573 experiment 0.529970140455754 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542205 chr10:75542190 synonymous SNV . 0 6 hm5C_associated_SNPs_23790 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:75542124-75542206
64251 chr12 6635459 6635459 1 + C G HNSC 6635453 + 6635433 6635473 41 CGTTGTCTTGCTCTCCACAGCCTTCTCTGGGCAAACGTCAC CGTTGTCTTGCTCTCCACAGCCTTCTGTGGGCAAACGTCAC < 41bp 1 0.0100541851406095 1 0.0853741466999054 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6635453 chr12:6635459 nonsynonymous SNV 0.873 1 27 hm5C_associated_SNPs_23791 0 0 8 DDX24 POSTAR2 ENCODE chr12:6635455-6635467
64251 chr11 118495765 118495765 1 + C G HNSC 118495754 + 118495734 118495774 41 CAGGGGGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCT CAGGGGGCCGAGCCCCTGGGCCCCCCTACAGGCCTGTTCCT < 41bp 1 0.0883390126769589 1 0.0501334071159363 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118495754 chr11:118495765 nonsynonymous SNV 0.392 0 32 hm5C_associated_SNPs_23792 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118495765-118495827
64251 chr11 118495765 118495765 1 + C G HNSC 118495755 + 118495735 118495775 41 AGGGGGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTG AGGGGGCCGAGCCCCTGGGCCCCCCTACAGGCCTGTTCCTG < 41bp 1 0.116799259550496 1 0.0552924871444702 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118495755 chr11:118495765 nonsynonymous SNV 0.392 0 31 hm5C_associated_SNPs_23793 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118495765-118495827
64251 chr11 118495765 118495765 1 + C G HNSC 118495756 + 118495736 118495776 41 GGGGGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGG GGGGGCCGAGCCCCTGGGCCCCCCTACAGGCCTGTTCCTGG < 41bp 1 0.192099915216118 1 0.149046897888184 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118495756 chr11:118495765 nonsynonymous SNV 0.392 0 30 hm5C_associated_SNPs_23794 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118495765-118495827
64251 chr11 118495765 118495765 1 + C G HNSC 118495757 + 118495737 118495777 41 GGGGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGGT GGGGCCGAGCCCCTGGGCCCCCCTACAGGCCTGTTCCTGGT < 41bp 1 0.258654245382959 1 0.103819340467453 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118495757 chr11:118495765 nonsynonymous SNV 0.392 0 29 hm5C_associated_SNPs_23795 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118495765-118495827
64251 chr11 118495765 118495765 1 + C G HNSC 118495758 + 118495738 118495778 41 GGGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGGTA GGGCCGAGCCCCTGGGCCCCCCTACAGGCCTGTTCCTGGTA < 41bp 1 0.0572200698823861 1 0.512029409408569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118495758 chr11:118495765 nonsynonymous SNV 0.392 0 28 hm5C_associated_SNPs_23796 0 0 1 PRPF8 POSTAR2 ENCODE chr11:118495765-118495827
64251 chr1 44433317 44433317 1 + G C HNSC 44433322 + 44433302 44433342 41 TCACACTGCTGTGCCGGGGTCTCCATGGCACAGATTACACA TCACACTGCTGTGCCCGGGTCTCCATGGCACAGATTACACA < 41bp 1 0.684718533935874 1 0.904116153717041 experiment 0.630562932128252 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control IPO13 ENSG00000117408 CDS Human protein_coding chr1:44433322 chr1:44433317 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_23797 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44433306-44433333
64251 chr2 29006792 29006792 1 + A G HNSC 29006781 + 29006761 29006801 41 TTTTATTTATAGGATTGTCACCAGACCTGCAATCTATGGAG TTTTATTTATAGGATTGTCACCAGACCTGCAGTCTATGGAG < 41bp 1 0.570740027583895 1 0.567758917808533 experiment 0.858519944832211 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1CB ENSG00000213639 CDS Human protein_coding chr2:29006781 chr2:29006792 synonymous SNV . 0 32 hm5C_associated_SNPs_23798 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:29006772-29006798
64251 chr17 49247332 49247332 1 + G A HNSC 49247315 + 49247295 49247335 41 GAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGT GAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCAAGT < 41bp 1 0.604526814789231 1 0.495444238185883 experiment 0.790946370421539 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247315 chr17:49247332 nonsynonymous SNV 0.930 3 38 hm5C_associated_SNPs_23799 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr17 27067575 27067575 1 + C G HNSC 27067581 + 27067561 27067601 41 GTTGTATGTGGTATCGATTCCTCCATGATCCTCACTGTGCC GTTGTATGTGGTATGGATTCCTCCATGATCCTCACTGTGCC < 41bp 1 0.790718711157615 1 0.966020822525024 experiment 0.41856257768477 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NEK8 ENSG00000160602 CDS Human protein_coding chr17:27067581 chr17:27067575 nonsynonymous SNV 0.647 3 15 hm5C_associated_SNPs_23800 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:27067524-27067606
64251 chr2 120124575 120124575 1 + C A HNSC 120124570 + 120124550 120124590 41 GCCAGTGCAATCTGGGCGATCGCTTCCTGGTCCTCGCCTCC GCCAGTGCAATCTGGGCGATCGCTTACTGGTCCTCGCCTCC < 41bp 1 0.284483338962409 1 0.119028300046921 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DBI ENSG00000155368 UTR5 Human protein_coding chr2:120124570 chr2:120124575 . . 0 26 hm5C_associated_SNPs_23804 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:120124540-120124580
64251 chr8 100182343 100182343 1 + C G HNSC 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACCAGTTATTCCCTGTTTCAGC < 41bp 1 0.073191086339573 1 0.120881170034409 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182343 nonsynonymous SNV 0.998 2 34 hm5C_associated_SNPs_23805 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:100182339-100182360
64251 chr10 43882406 43882406 1 - G A HNSC 43882399 - 43882379 43882419 41 TTTACAACTTCTTCTCTCCTCTCAACCCTGTGAGAGTCCAT TTTACAACTTCTTTTCTCCTCTCAACCCTGTGAGAGTCCAT < 41bp 1 0.596715720961738 1 0.757089495658875 experiment 0.806568558076525 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882399 chr10:43882406 synonymous SNV . 0 14 hm5C_associated_SNPs_23806 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43882301-43882458
64251 chr1 235600733 235600733 1 + G T HNSC 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGTCGCGACTACTCATTATCGCCAGCATTGGC < 41bp 1 0.496784460824425 1 0.0647241473197937 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600733 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_23807 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr3 49042401 49042401 1 + G A HNSC 49042413 + 49042393 49042433 41 GGACAGTGGGCCTGTGTACCCAGAGACCATCTGCTCCCATA GGACAGTGAGCCTGTGTACCCAGAGACCATCTGCTCCCATA < 41bp 1 0.79634015704502 1 0.692553043365479 experiment 0.407319685909961 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P4HTM ENSG00000178467 CDS Human protein_coding chr3:49042413 chr3:49042401 nonsynonymous SNV 0.996 2 9 hm5C_associated_SNPs_23810 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:49042397-49042418
64251 chr6 151672243 151672243 1 + T C HNSC 151672255 + 151672235 151672275 41 TACCATTATTGAAGAAAGGTCTCCTTCTTGGATATCTGCTT TACCATTACTGAAGAAAGGTCTCCTTCTTGGATATCTGCTT < 41bp 1 0.14277093748947 1 0.340678572654724 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151672255 chr6:151672243 nonsynonymous SNV 0.018 1 9 hm5C_associated_SNPs_23811 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151672218-151672244
64251 chr11 209939 209939 1 + T C HNSC 209927 + 209907 209947 41 GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCC GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCACGGAGATCC < 41bp 1 0.581217317301734 1 0.334607839584351 experiment 0.837565365396532 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209927 chr11:209939 nonsynonymous SNV 0.991 2 33 hm5C_associated_SNPs_23812 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209923-209949
64251 chr10 31812948 31812948 1 + C A HNSC 31812931 + 31812911 31812951 41 GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGA GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGAGGA < 41bp 1 0.254973306142583 1 0.265950620174408 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31812931 chr10:31812948 synonymous SNV . 0 38 hm5C_associated_SNPs_23818 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:31812934-31812948
64251 chr7 2472414 2472414 1 + C T HNSC 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACGGGGCTGCCGCTGCCCACGCCCGGGCCG < 41bp 1 0.498478479974919 1 0.137936621904373 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472414 nonsynonymous SNV 0.000 0 19 hm5C_associated_SNPs_23819 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr1 28861634 28861634 1 + G A HNSC 28861637 + 28861617 28861657 41 TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCA TGCAGGTGCAGCTGGATATGCCTGTGGTAAAGGTGGCCTCA < 41bp 1 0.357647673457926 1 0.315275281667709 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861637 chr1:28861634 nonsynonymous SNV 0.015 0 18 hm5C_associated_SNPs_23820 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28861595-28861645
64251 chr1 44878355 44878355 1 + C T HNSC 44878350 + 44878330 44878370 41 TGCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTA TGCTGTCTCTGGCCTCATTTCTGATTGGGAAGCCTCATCTA < 41bp 1 0.565309006403463 1 0.798585295677185 experiment 0.869381987193075 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878350 chr1:44878355 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_23822 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44878329-44878367
64251 chr1 44878355 44878355 1 + C T HNSC 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATTGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA < 41bp 1 0.506774486382585 1 0.22364404797554 experiment 0.98645102723483 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878355 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_23823 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44878329-44878367
64251 chr10 94773979 94773979 1 + A G HNSC 94773982 + 94773962 94774002 41 TCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCT TCTGAGCCTGTGCCAGGGTTCCAGGGGGATACCCTGCAGCT < 41bp 1 0.63056989179689 1 0.790661871433258 experiment 0.738860216406221 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94773982 chr10:94773979 synonymous SNV . 0 18 hm5C_associated_SNPs_23824 0 0 6 SF3B4 POSTAR2 ENCODE chr10:94773938-94773995
64251 chr4 123814172 123814172 1 - C A HNSC 123814174 - 123814154 123814194 41 AGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACA AGTGGATGGATCTCAATGACCTTGCGAAGACTGAAAATACA < 41bp 1 0.334151114621728 1 0.0737458467483521 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814174 chr4:123814172 synonymous SNV . 0 23 hm5C_associated_SNPs_23825 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:123814156-123814184
64251 chr3 184648306 184648306 1 + A T HNSC 184648321 + 184648301 184648341 41 GACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA GACACTGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA < 41bp 1 0.103538214369866 1 0.332906037569046 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184648321 chr3:184648306 nonsynonymous SNV 0.998 3 6 hm5C_associated_SNPs_23826 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184648293-184648331
64251 chr13 24858302 24858302 1 + G T HNSC 24858291 + 24858271 24858311 41 AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGG AGTTTCTTCAGATGGAGGTACTGAGCCCTCTTCCTTAGTGG < 41bp 1 0.154201118113062 1 0.323364615440369 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24858291 chr13:24858302 nonsynonymous SNV 0.719 0 32 hm5C_associated_SNPs_23827 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr13:24858282-24858302
64251 chr19 50912134 50912134 1 + G A HNSC 50912125 + 50912105 50912145 41 CCACAACCTGTGTTACACCACGCTCCTTCGGCCCGGGACTG CCACAACCTGTGTTACACCACGCTCCTTCAGCCCGGGACTG < 41bp 1 0.186532658782493 1 0.0524135529994965 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912125 chr19:50912134 nonsynonymous SNV 0.068 0 30 hm5C_associated_SNPs_23828 1 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50912116-50912143
64251 chr16 46960923 46960923 1 + G A HNSC 46960906 + 46960886 46960926 41 AGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAG AGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGACAG < 41bp 1 0.331761877079614 1 0.0881169140338898 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPT2 ENSG00000166123 CDS Human protein_coding chr16:46960906 chr16:46960923 synonymous SNV . 0 38 hm5C_associated_SNPs_23829 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:46960900-46960944
64251 chr13 61084005 61084005 1 + C G HNSC 61083991 + 61083971 61084011 41 TAATGGCAACAACTTAGAAGCAGCACTGAACGTACTTCTTA TAATGGCAACAACTTAGAAGCAGCACTGAACGTAGTTCTTA < 41bp 1 0.721894327287317 1 0.277125477790833 experiment 0.556211345425366 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61083991 chr13:61084005 nonsynonymous SNV 0.974 4 35 hm5C_associated_SNPs_23830 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:61083993-61084015
64251 chr19 50339143 50339143 1 + C T HNSC 50339146 + 50339126 50339166 41 CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC CTCCTGGACCCATCCTTTGGCCCCAGAACCCTGGGGCCAAC < 41bp 1 0.497240907447486 1 0.113131880760193 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339146 chr19:50339143 nonsynonymous SNV 0.998 3 18 hm5C_associated_SNPs_23831 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339143 50339143 1 + C T HNSC 50339147 + 50339127 50339167 41 TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC TCCTGGACCCATCCTTTGGCCCCAGAACCCTGGGGCCAACC < 41bp 1 0.177438025805819 1 0.0579069554805756 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339147 chr19:50339143 nonsynonymous SNV 0.998 3 17 hm5C_associated_SNPs_23832 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339143 50339143 1 + C T HNSC 50339148 + 50339128 50339168 41 CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC CCTGGACCCATCCTTTGGCCCCAGAACCCTGGGGCCAACCC < 41bp 1 0.443978945397262 1 0.0949753224849701 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339148 chr19:50339143 nonsynonymous SNV 0.998 3 16 hm5C_associated_SNPs_23833 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339143 50339143 1 + C T HNSC 50339149 + 50339129 50339169 41 CTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT CTGGACCCATCCTTTGGCCCCAGAACCCTGGGGCCAACCCT < 41bp 1 0.443619532128233 1 0.148937791585922 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339149 chr19:50339143 nonsynonymous SNV 0.998 3 15 hm5C_associated_SNPs_23834 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339143 50339143 1 + C T HNSC 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TTGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC < 41bp 1 0.0154895177581773 1 0.0361185073852539 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339143 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_23835 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339143 50339143 1 + C T HNSC 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT TGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT < 41bp 1 0.113951230137179 1 0.0475023984909058 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339143 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_23836 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr12 124144433 124144433 1 + G A HNSC 124144415 + 124144395 124144435 41 AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCGAA AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCAAA < 41bp 1 0.362730717634237 1 0.0412617325782776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144415 chr12:124144433 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_23837 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:124144401-124144434
64251 chr5 71492252 71492252 1 + G A HNSC 71492268 + 71492248 71492288 41 GGAGGACAAAGCTGAAGATGCCAGAGAGGAGGAATATGAGC GGAGAACAAAGCTGAAGATGCCAGAGAGGAGGAATATGAGC < 41bp 1 0.440425872042108 1 0.283119916915894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492268 chr5:71492252 nonsynonymous SNV 0.995 2 5 hm5C_associated_SNPs_23838 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71492186-71492308
64251 chr17 33321390 33321390 1 + T G HNSC 33321403 + 33321383 33321423 41 AGGTGCATAAGAATGGAGACCACTTCAGCTACTTCAGCCGC AGGTGCAGAAGAATGGAGACCACTTCAGCTACTTCAGCCGC < 41bp 1 0.252250760419552 1 0.0698825418949127 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33321403 chr17:33321390 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_23839 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33321365-33321390
64251 chr5 179153693 179153693 1 + A G HNSC 179153689 + 179153669 179153709 41 CTTCTGTCTTAGAAGAGAAACAGAAAAGTGATGCTGAAGAA CTTCTGTCTTAGAAGAGAAACAGAGAAGTGATGCTGAAGAA < 41bp 1 0.532101214143523 1 0.452913403511047 experiment 0.935797571712955 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179153689 chr5:179153693 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_23840 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179153680-179153700
64251 chr5 179153693 179153693 1 + A G HNSC 179153702 + 179153682 179153722 41 AGAGAAACAGAAAAGTGATGCTGAAGAAGATGGTGGCACTG AGAGAAACAGAGAAGTGATGCTGAAGAAGATGGTGGCACTG < 41bp 1 0.769969609943835 1 0.432688534259796 experiment 0.460060780112329 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179153702 chr5:179153693 nonsynonymous SNV 0.998 0 12 hm5C_associated_SNPs_23841 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179153680-179153700
64251 chr9 133738189 133738189 1 + G T HNSC 133738171 + 133738151 133738191 41 TCTACGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG TCTACGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCTAG < 41bp 1 0.116313198931886 1 0.200679332017899 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738171 chr9:133738189 stopgain 0.861 1 39 hm5C_associated_SNPs_23842 0 0 1 SF3B4 POSTAR2 ENCODE chr9:133738085-133738194
64251 chr11 64978326 64978326 1 + A G HNSC 64978306 + 64978286 64978326 41 ATTTTTCAAAACTCTGGACACAGATCTGGATGGAGTTGTGA ATTTTTCAAAACTCTGGACACAGATCTGGATGGAGTTGTGG < 41bp 1 0.147763642743766 1 0.0594829916954041 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64978306 chr11:64978326 nonsynonymous SNV 0.980 0 41 hm5C_associated_SNPs_23844 0 0 4 AKAP8L POSTAR2 ENCODE chr11:64978323-64978362
64251 chr20 44045291 44045291 1 + T A HNSC 44045286 + 44045266 44045306 41 GGGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGT GGGGCCACCCTTCCTGCAGGCCCCAACAGGTGCAGAGCTGT < 41bp 1 0.595662926667093 1 0.113614499568939 experiment 0.808674146665814 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045286 chr20:44045291 nonsynonymous SNV 0.996 1 26 hm5C_associated_SNPs_23845 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045291 44045291 1 + T A HNSC 44045287 + 44045267 44045307 41 GGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTG GGGCCACCCTTCCTGCAGGCCCCAACAGGTGCAGAGCTGTG < 41bp 1 0.442993534024434 1 0.16219174861908 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045287 chr20:44045291 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_23846 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045291 44045291 1 + T A HNSC 44045288 + 44045268 44045308 41 GGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTGG GGCCACCCTTCCTGCAGGCCCCAACAGGTGCAGAGCTGTGG < 41bp 1 0.205913488801158 1 0.342660844326019 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045288 chr20:44045291 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_23847 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr2 173451102 173451102 1 + C A HNSC 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCGTGTTGAGACCTCCAGCGCAGTGCCTCTGGT < 41bp 1 0.775457915248676 1 0.948456048965454 experiment 0.449084169502649 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451102 nonsynonymous SNV 0.162 1 25 hm5C_associated_SNPs_23848 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr12 44166765 44166765 1 + G A HNSC 44166754 + 44166734 44166774 41 TTATGAATTGAAGAATGTCACAAATAACTTTGATGAACGAC TTATGAATTGAAGAATGTCACAAATAACTTTAATGAACGAC < 41bp 1 0.216964388563155 1 0.39663690328598 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IRAK4 ENSG00000198001 CDS Human protein_coding chr12:44166754 chr12:44166765 nonsynonymous SNV 0.995 2 32 hm5C_associated_SNPs_23849 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:44166765-44166793
64251 chr2 27662654 27662654 1 + C T HNSC 27662638 + 27662618 27662658 41 TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGCCTGCAGTC TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGCCTGTAGTC < 41bp 1 0.0466727743894173 1 0.0635263621807098 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27662638 chr2:27662654 stopgain 1.000 1 37 hm5C_associated_SNPs_23851 0 0 4 BUD13 POSTAR2 ENCODE chr2:27662636-27662677
64251 chr15 96875682 96875682 1 + C A HNSC 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGAGC < 41bp 1 0.497611518640926 1 0.470450818538666 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875682 synonymous SNV . 0 39 hm5C_associated_SNPs_23852 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:96875660-96875700
64251 chr16 24826581 24826581 1 + C T HNSC 24826598 + 24826578 24826618 41 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG CCATGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG < 41bp 1 0.42216024419345 1 0.141025215387344 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24826598 chr16:24826581 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_23853 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:24826558-24826581
64251 chr9 129974476 129974476 1 + G A HNSC 129974474 + 129974454 129974494 41 TGCCCACCATGGAGGGGCCTCTGAGAAGAAAAACCCTGCTC TGCCCACCATGGAGGGGCCTCTAAGAAGAAAAACCCTGCTC < 41bp 1 0.447991607842316 1 0.424405694007874 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129974474 chr9:129974476 synonymous SNV . 0 23 hm5C_associated_SNPs_23854 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:129974461-129974506
64251 chr19 14512333 14512333 1 + C T HNSC 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATCATGAGGATCCTGGCCAAGAGCTTGCCTAA < 41bp 1 0.258145975923654 1 0.0665218532085419 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512333 synonymous SNV . 0 34 hm5C_associated_SNPs_23855 0 0 1 SND1 POSTAR2 ENCODE chr19:14512310-14512376
64251 chr7 129046276 129046276 1 + G A HNSC 129046285 + 129046265 129046305 41 TGTATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAGCC TGTATGTAACTAAAATTGACCCCATCTGTGCCCTGCAAGCC < 41bp 1 0.0895083586649911 1 0.0345128178596497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:129046285 chr7:129046276 nonsynonymous SNV 0.998 5 12 hm5C_associated_SNPs_23856 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:129046245-129046277
64251 chr5 149754329 149754329 1 + G A HNSC 149754323 + 149754303 149754343 41 GCGGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGA GCGGGGAAGCGGGAGGAGGACTCGCAAAGCAGCAGCGAGGA < 41bp 1 0.583299627975167 1 0.270928919315338 experiment 0.833400744049666 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754323 chr5:149754329 synonymous SNV . 0 27 hm5C_associated_SNPs_23857 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754329 149754329 1 + G A HNSC 149754325 + 149754305 149754345 41 GGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGAAT GGGGAAGCGGGAGGAGGACTCGCAAAGCAGCAGCGAGGAAT < 41bp 1 0.79500206317588 1 0.488126009702682 experiment 0.40999587364824 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754325 chr5:149754329 synonymous SNV . 0 25 hm5C_associated_SNPs_23858 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754329 149754329 1 + G A HNSC 149754335 + 149754315 149754355 41 GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA GAGGAGGACTCGCAAAGCAGCAGCGAGGAATCGGACAGTGA < 41bp 1 0.53817263603784 1 0.325180172920227 experiment 0.923654727924321 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754335 chr5:149754329 synonymous SNV . 0 15 hm5C_associated_SNPs_23859 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr11 118267058 118267058 1 + C T HNSC 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CTCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA < 41bp 1 0.216523790865439 1 0.284682959318161 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267058 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_23861 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:118267030-118267062
64251 chr2 189458684 189458684 1 + A T HNSC 189458701 + 189458681 189458721 41 GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGT GGGTCTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGT < 41bp 1 0.596566234559943 1 0.0931767225265503 experiment 0.806867530880114 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458701 chr2:189458684 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_23862 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:189458675-189458694
64251 chr11 118267059 118267059 1 + C T HNSC 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CCTCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA < 41bp 1 0.242147759748033 1 0.248868972063065 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267059 synonymous SNV . 0 3 hm5C_associated_SNPs_23863 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:118267030-118267062
64251 chr11 110035195 110035195 1 + G A HNSC 110035177 + 110035157 110035197 41 CATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAG CATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGAAG < 41bp 1 0.179925273537179 1 0.164308249950409 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035177 chr11:110035195 nonsynonymous SNV 0.126 1 39 hm5C_associated_SNPs_23865 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:110035178-110035205
64251 chr11 110035195 110035195 1 + G A HNSC 110035178 + 110035158 110035198 41 ATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGG ATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGAAGG < 41bp 1 0.456379997052607 1 0.491971701383591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035178 chr11:110035195 nonsynonymous SNV 0.126 1 38 hm5C_associated_SNPs_23866 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:110035178-110035205
64251 chr13 76382245 76382245 1 + C G HNSC 76382234 + 76382214 76382254 41 GGAACTACCGTGCCTCCCATCAGTTTCACCCCTGGCCCCTG GGAACTACCGTGCCTCCCATCAGTTTCACCCGTGGCCCCTG < 41bp 1 0.271524194405342 1 0.823404610157013 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76382234 chr13:76382245 nonsynonymous SNV 0.919 4 32 hm5C_associated_SNPs_23880 0 0 1 SRSF9 POSTAR2 ENCODE chr13:76382237-76382355
64251 chr10 43316394 43316394 1 + C T HNSC 43316391 + 43316371 43316411 41 TTTCCTTTAAGGCCCTATCACTCCACAGGGAACTGGTTTCT TTTCCTTTAAGGCCCTATCACTCTACAGGGAACTGGTTTCT < 41bp 1 0.465628686426088 1 0.846824169158936 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43316391 chr10:43316394 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_23881 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:43316372-43316406
64251 chr3 49742512 49742512 1 + C T HNSC 49742520 + 49742500 49742540 41 CAACCGCTTCCTCAGCACAGCGGCTGTGAGCCTCATGACCC CAACCGCTTCCTTAGCACAGCGGCTGTGAGCCTCATGACCC < 41bp 1 0.443539150150453 1 0.198510527610779 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742520 chr3:49742512 synonymous SNV . 0 13 hm5C_associated_SNPs_23882 0 0 3 BUD13 POSTAR2 ENCODE chr3:49742485-49742526
64251 chr8 144801638 144801638 1 + C T HNSC 144801634 + 144801614 144801654 41 AGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGGT AGCTGATCCTGGAGACCATCCCACTGCCATCTGAGGAGGGT < 41bp 1 0.12049903664224 1 0.16099226474762 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144801634 chr8:144801638 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_23883 0 0 1 ZNF622 POSTAR2 ENCODE chr8:144801615-144801672
64251 chr14 105355876 105355876 1 + C T HNSC 105355874 + 105355854 105355894 41 ACGAGGCGCCGGCAGCAGGGCTCGGATTACACGTCCACCTC ACGAGGCGCCGGCAGCAGGGCTTGGATTACACGTCCACCTC < 41bp 1 0.266806332673823 1 0.111169129610062 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105355874 chr14:105355876 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_23884 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:105355856-105355880
64251 chr20 32217677 32217677 1 + C T HNSC 32217687 + 32217667 32217707 41 CCGAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGAT CCGAGTTGGTTTCCAGGCAGCACAGCCCTGGGAGTGCAGAT < 41bp 1 0.295469190443659 1 0.0861987173557281 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32217687 chr20:32217677 synonymous SNV . 0 11 hm5C_associated_SNPs_23885 0 0 3 BUD13 POSTAR2 ENCODE chr20:32217616-32217726
64251 chr20 32217677 32217677 1 + C T HNSC 32217689 + 32217669 32217709 41 GAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGATTC GAGTTGGTTTCCAGGCAGCACAGCCCTGGGAGTGCAGATTC < 41bp 1 0.401923116347318 1 0.0373454093933105 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32217689 chr20:32217677 synonymous SNV . 0 9 hm5C_associated_SNPs_23886 0 0 3 BUD13 POSTAR2 ENCODE chr20:32217616-32217726
64251 chr9 131897100 131897100 1 + C T HNSC 131897102 + 131897082 131897122 41 GCAGCCTTCGCTGCTTTCCTCTGCTGTCTCTGCAAGATTGG GCAGCCTTCGCTGCTTTCTTCTGCTGTCTCTGCAAGATTGG < 41bp 1 0.486581427926211 1 0.359908640384674 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPA ENSG00000119383 CDS Human protein_coding chr9:131897102 chr9:131897100 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_23887 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:131897094-131897117
64251 chr4 103500169 103500169 1 + G A HNSC 103500160 + 103500140 103500180 41 CTGGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC CTGGCAGCTTCACAAGGCGCCTGGAACCCATGGTATCAGAC < 41bp 1 0.623743836411979 1 0.302279770374298 experiment 0.752512327176043 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103500160 chr4:103500169 nonsynonymous SNV 0.805 4 30 hm5C_associated_SNPs_23888 0 0 2 GRWD1 POSTAR2 ENCODE chr4:103500122-103500175
64251 chr7 44100510 44100510 1 + G C HNSC 44100530 + 44100510 44100550 41 GAGTGAGGCTGAGGGCACATCTTGCCCTTCCCCTCTCAGAC CAGTGAGGCTGAGGGCACATCTTGCCCTTCCCCTCTCAGAC < 41bp 1 0.422700403077104 1 0.495849370956421 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DBNL ENSG00000136279 CDS Human protein_coding chr7:44100530 chr7:44100510 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_23889 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:44100472-44100557
64251 chr12 50822793 50822793 1 + A G HNSC 50822799 + 50822779 50822819 41 TGAAACCACAAGAAATACTACAGGCATTGAAGAATCAACTG TGAAACCACAAGAAGTACTACAGGCATTGAAGAATCAACTG < 41bp 1 0.483536181517206 1 0.308820068836212 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LARP4 ENSG00000161813 CDS Human protein_coding chr12:50822799 chr12:50822793 nonsynonymous SNV 0.928 0 15 hm5C_associated_SNPs_23890 0 0 1 GRWD1 POSTAR2 ENCODE chr12:50822758-50822823
64251 chr22 29684679 29684679 1 + G C HNSC 29684675 + 29684655 29684695 41 TTTCCGGACCAGGAGAGAACCGGAGCATGAGTGGCCCTGAT TTTCCGGACCAGGAGAGAACCGGACCATGAGTGGCCCTGAT < 41bp 1 0.636710209563778 1 0.912412166595459 experiment 0.726579580872444 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29684675 chr22:29684679 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_23891 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:29684378-29684709
64251 chr9 125154751 125154751 1 + C A HNSC 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAAGACCTGTCCCTAAGTTTCCTTCCGTGTGCCGGATGCCA < 41bp 1 0.0180190222622562 1 0.0303155481815338 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154751 stopgain 0.979 1 16 hm5C_associated_SNPs_23892 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr19 541375 541375 1 + T C HNSC 541393 + 541373 541413 41 CGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTG CGCGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTG < 41bp 1 0.719086338545279 1 0.0710590481758118 experiment 0.561827322909441 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC34 ENSG00000099804 CDS Human protein_coding chr19:541393 chr19:541375 nonsynonymous SNV 0.078 0 3 hm5C_associated_SNPs_23893 0 0 5 CPSF2 POSTAR2 GSE37401,GSM917670 chr19:541372-541410
64251 chr7 73969543 73969543 1 + G T HNSC 73969540 + 73969520 73969560 41 GAGGGAGTCAAAGAGCCCATCATGGATAGTCAAGGTACCCA GAGGGAGTCAAAGAGCCCATCATTGATAGTCAAGGTACCCA < 41bp 1 0.118342444264372 1 0.0689175128936768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73969540 chr7:73969543 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_23894 0 0 1 PRPF8 POSTAR2 ENCODE chr7:73969535-73969590
64251 chr5 131953939 131953939 1 + A T HNSC 131953938 + 131953918 131953958 41 GATGATTGTTATGAGGACAACAGAACTTGTGAACAAGGATC GATGATTGTTATGAGGACAACTGAACTTGTGAACAAGGATC < 41bp 1 0.495094395703063 1 0.382280707359314 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131953938 chr5:131953939 synonymous SNV . 0 22 hm5C_associated_SNPs_23895 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:131953904-131953944
64251 chr2 99179952 99179952 1 + C T HNSC 99179968 + 99179948 99179988 41 TACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGAT TACCTGCTGCTGACCACTCTCACCGACTGCGTGGCCATGAT < 41bp 1 0.661275919576841 1 0.318508148193359 experiment 0.677448160846318 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99179968 chr2:99179952 nonsynonymous SNV 0.950 4 5 hm5C_associated_SNPs_23896 0 0 10 DDX24 POSTAR2 ENCODE chr2:99179915-99180002
64251 chr2 97008569 97008569 1 + G C HNSC 97008573 + 97008553 97008593 41 TAAACAGAAAGACACCGAACCAACCAACTTTAAAGTAAGAA TAAACAGAAAGACACCCAACCAACCAACTTTAAAGTAAGAA < 41bp 1 0.0597752906179768 1 0.237188935279846 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCAPH ENSG00000121152 CDS Human protein_coding chr2:97008573 chr2:97008569 nonsynonymous SNV 0.671 4 17 hm5C_associated_SNPs_23897 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:97008501-97008570
64251 chr4 20568976 20568976 1 + C T HNSC 20568982 + 20568962 20569002 41 AGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGG AGTGATCCAGTTGATTTTTACCGATGCACCTGTCCATATGG < 41bp 1 0.111701796976624 1 0.47745344042778 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568982 chr4:20568976 synonymous SNV . 0 15 hm5C_associated_SNPs_23898 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr4 20568976 20568976 1 + C T HNSC 20568983 + 20568963 20569003 41 GTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGT GTGATCCAGTTGATTTTTACCGATGCACCTGTCCATATGGT < 41bp 1 0.145167993666608 1 0.590771079063416 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568983 chr4:20568976 synonymous SNV . 0 14 hm5C_associated_SNPs_23899 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr1 27089589 27089589 1 + C T HNSC 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ATCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT < 41bp 1 0.632103773045265 1 0.921338796615601 experiment 0.73579245390947 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089589 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_23900 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:27089540-27089590
64251 chr4 1017629 1017629 1 + C T HNSC 1017627 + 1017607 1017647 41 CGACCGCGCTTCACACAGCCCTCCAAGATGAGGCGCCGGGT CGACCGCGCTTCACACAGCCCTTCAAGATGAGGCGCCGGGT < 41bp 1 0.42905159040726 1 0.548427700996399 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1017627 chr4:1017629 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_23901 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:1017629-1017630
64251 chr8 144732947 144732947 1 + A T HNSC 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCTTCGCTCAGACCTTATTGAACACCA < 41bp 1 0.586550857738404 1 0.284761607646942 experiment 0.826898284523192 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732947 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_23904 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:144732906-144732960
64251 chr3 120315376 120315376 1 + G A HNSC 120315381 + 120315361 120315401 41 ACGATCCCAACCGCCGAGGGCTCATCGTGAGTGTGGGGCCT ACGATCCCAACCGCCAAGGGCTCATCGTGAGTGTGGGGCCT < 41bp 1 0.465998803774395 1 0.064334511756897 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315381 chr3:120315376 nonsynonymous SNV 0.025 0 16 hm5C_associated_SNPs_23905 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:120315356-120315387
64251 chr12 112940025 112940025 1 + T C HNSC 112940029 + 112940009 112940049 41 GTGGAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA GTGGAGATCAGAGCCCCCTCCCGCCTTGTACTCCAACGCCA < 41bp 1 0.293297739043281 1 0.224377363920212 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112940029 chr12:112940025 synonymous SNV . 0 17 hm5C_associated_SNPs_23906 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:112939989-112940025
64251 chr12 112940027 112940027 1 + T C HNSC 112940029 + 112940009 112940049 41 GTGGAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA GTGGAGATCAGAGCCCTCCCCCGCCTTGTACTCCAACGCCA < 41bp 1 0.348380278705815 1 0.222508370876312 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112940029 chr12:112940027 nonsynonymous SNV 0.997 2 19 hm5C_associated_SNPs_23907 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:112940004-112940060
64251 chr9 131247076 131247076 1 + A T HNSC 131247090 + 131247070 131247110 41 AAAGAGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCG AAAGAGTGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCG < 41bp 1 0.126623052455193 1 0.142958670854568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247090 chr9:131247076 nonsynonymous SNV 0.557 1 7 hm5C_associated_SNPs_23908 0 0 9 DDX24 POSTAR2 ENCODE chr9:131247044-131247083
64251 chr9 131247076 131247076 1 + A T HNSC 131247094 + 131247074 131247114 41 AGAGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCC AGTGCTTGAAGAAGGCCATCCGAGCCCAGAAGGAGCGAGCC < 41bp 1 0.431215886548302 1 0.743545830249786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247094 chr9:131247076 nonsynonymous SNV 0.557 1 3 hm5C_associated_SNPs_23909 0 0 9 DDX24 POSTAR2 ENCODE chr9:131247044-131247083
64251 chr16 85689393 85689393 1 + G A HNSC 85689403 + 85689383 85689423 41 CCCCACCCCCGGCTCCCTGCCCCCACTGCACCCATCAGCGA CCCCACCCCCAGCTCCCTGCCCCCACTGCACCCATCAGCGA < 41bp 1 0.488976230768856 1 0.124807596206665 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689403 chr16:85689393 nonsynonymous SNV 0.465 1 11 hm5C_associated_SNPs_23910 0 0 2 PCBP2 POSTAR2 ENCODE chr16:85689346-85689466
64251 chr17 41154796 41154796 1 + G C HNSC 41154779 + 41154759 41154799 41 ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGA ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAACAGA < 41bp 1 0.518860876987435 1 0.37147980928421 experiment 0.96227824602513 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154779 chr17:41154796 nonsynonymous SNV 0.986 2 38 hm5C_associated_SNPs_23911 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:41154687-41154800
64251 chr1 109806290 109806290 1 + C G HNSC 109806280 + 109806260 109806300 41 GCAGCAGCCTGGTGGCCTGGCATGGCCTCTCGCTGCCCATC GCAGCAGCCTGGTGGCCTGGCATGGCCTCTGGCTGCCCATC < 41bp 1 0.264761841629817 1 0.24673068523407 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806280 chr1:109806290 nonsynonymous SNV 0.947 0 31 hm5C_associated_SNPs_23914 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:109806279-109806335
64251 chr3 17056235 17056235 1 + C T HNSC 17056251 + 17056231 17056271 41 GCCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG GCCTTTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG < 41bp 1 0.531010870562207 1 0.143379151821136 experiment 0.937978258875586 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056251 chr3:17056235 synonymous SNV . 0 5 hm5C_associated_SNPs_23915 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:17056211-17056243
64251 chr1 168014243 168014243 1 + C G HNSC 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATGT < 41bp 1 0.409804845170957 1 0.468249619007111 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014243 nonsynonymous SNV 0.224 0 40 hm5C_associated_SNPs_23916 0 0 5 GRWD1 POSTAR2 ENCODE chr1:168014221-168014295
64251 chr7 45662289 45662289 1 + G C HNSC 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGCAGCTG < 41bp 1 0.447613777415007 1 0.584006726741791 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662289 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_23927 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:45662269-45662313
64251 chr14 71428976 71428976 1 + C A HNSC 71428988 + 71428968 71429008 41 TCTGAGTTCATCCGAGAGGCCACACCCCCAGTTGGTTGCAG TCTGAGTTAATCCGAGAGGCCACACCCCCAGTTGGTTGCAG < 41bp 1 0.137501313367373 1 0.0677918195724487 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71428988 chr14:71428976 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_23929 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:71428960-71428980
64251 chr7 133682292 133682292 1 + G C HNSC 133682272 + 133682252 133682292 41 TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAG TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAC < 41bp 1 0.219498333202051 1 0.0813802182674408 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682272 chr7:133682292 nonsynonymous SNV 0.985 0 41 hm5C_associated_SNPs_23930 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682292 133682292 1 + G C HNSC 133682276 + 133682256 133682296 41 GCTCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTC GCTCAAGACAGCCACACGAACACGGATCTCCCCCCACTGTC < 41bp 1 0.774472796191273 1 0.703158795833588 experiment 0.451054407617453 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682276 chr7:133682292 nonsynonymous SNV 0.985 0 37 hm5C_associated_SNPs_23931 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682292 133682292 1 + G C HNSC 133682278 + 133682258 133682298 41 TCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTCAG TCAAGACAGCCACACGAACACGGATCTCCCCCCACTGTCAG < 41bp 1 0.447885159728138 1 0.374985665082932 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682278 chr7:133682292 nonsynonymous SNV 0.985 0 35 hm5C_associated_SNPs_23932 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr11 74329716 74329716 1 + G A HNSC 74329711 + 74329691 74329731 41 GCCAACAATGAGCTGACCACCAATGGTCATGGCCCACCTGC GCCAACAATGAGCTGACCACCAATGATCATGGCCCACCTGC < 41bp 1 0.578955619873307 1 0.31966632604599 experiment 0.842088760253385 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329711 chr11:74329716 nonsynonymous SNV 0.963 4 26 hm5C_associated_SNPs_23936 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329716 74329716 1 + G A HNSC 74329725 + 74329705 74329745 41 GACCACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTT GACCACCAATGATCATGGCCCACCTGCATCCAAGCAGGTTT < 41bp 1 0.376364159749546 1 0.0269297957420349 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329725 chr11:74329716 nonsynonymous SNV 0.963 4 12 hm5C_associated_SNPs_23937 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329716 74329716 1 + G A HNSC 74329727 + 74329707 74329747 41 CCACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCC CCACCAATGATCATGGCCCACCTGCATCCAAGCAGGTTTCC < 41bp 1 0.100975286612086 1 0.0587345659732819 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329727 chr11:74329716 nonsynonymous SNV 0.963 4 10 hm5C_associated_SNPs_23938 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329716 74329716 1 + G A HNSC 74329728 + 74329708 74329748 41 CACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCC CACCAATGATCATGGCCCACCTGCATCCAAGCAGGTTTCCC < 41bp 1 0.693641598852596 1 0.355924665927887 experiment 0.612716802294808 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329728 chr11:74329716 nonsynonymous SNV 0.963 4 9 hm5C_associated_SNPs_23939 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329716 74329716 1 + G A HNSC 74329731 + 74329711 74329751 41 CAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGC CAATGATCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGC < 41bp 1 0.139079533362502 1 0.284024238586426 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329731 chr11:74329716 nonsynonymous SNV 0.963 4 6 hm5C_associated_SNPs_23940 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329716 74329716 1 + G A HNSC 74329734 + 74329714 74329754 41 TGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGCAGC TGATCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGCAGC < 41bp 1 0.263127861436098 1 0.340900123119354 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329734 chr11:74329716 nonsynonymous SNV 0.963 4 3 hm5C_associated_SNPs_23941 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr3 37090050 37090050 1 + G C HNSC 37090068 + 37090048 37090088 41 ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA ATCTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA < 41bp 1 0.384436404097982 1 0.0526585876941681 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090068 chr3:37090050 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_23942 0 0 1 SND1 POSTAR2 ENCODE chr3:37090048-37090100
64251 chr17 65909123 65909123 1 + A G HNSC 65909116 + 65909096 65909136 41 CTCGTTCAGGTACAGCTCTGCCATCCTATAGAAAATTTGTT CTCGTTCAGGTACAGCTCTGCCATCCTGTAGAAAATTTGTT < 41bp 1 0.00568259187170913 1 0.0197587907314301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65909116 chr17:65909123 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_23943 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65909078-65909126
64251 chr8 145065441 145065441 1 + C T HNSC 145065439 + 145065419 145065459 41 TCTGGGGACAACTATCCTCCCCCCAACCCTGGATATCCGGG TCTGGGGACAACTATCCTCCCCTCAACCCTGGATATCCGGG < 41bp 1 0.16803743103628 1 0.0836500823497772 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065439 chr8:145065441 nonsynonymous SNV 0.738 0 23 hm5C_associated_SNPs_23944 0 0 28 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:145065440-145065460
64251 chr7 99159525 99159525 1 + C T HNSC 99159535 + 99159515 99159555 41 ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC ACCTGTTCCTTAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC < 41bp 1 0.202122347461825 1 0.0691644549369812 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF655 ENSG00000197343 CDS Human protein_coding chr7:99159535 chr7:99159525 stopgain 1.000 0 11 hm5C_associated_SNPs_23946 0 0 4 SF3A3 POSTAR2 ENCODE chr7:99159432-99159544
64251 chr20 42089355 42089355 1 + G C HNSC 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGCGCAGCAAAGGTCGATCACGTTCTCG < 41bp 1 0.48026491751267 1 0.393512934446335 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089355 synonymous SNV . 0 18 hm5C_associated_SNPs_23947 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:42089335-42089356
64251 chr17 66039309 66039309 1 + C T HNSC 66039310 + 66039290 66039330 41 TGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGC TGCTGTTGAGCAGATTCTTTCTACCTTAGTTCGGCTCCTGC < 41bp 1 0.434812822334155 1 0.330330371856689 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039310 chr17:66039309 nonsynonymous SNV 0.995 3 20 hm5C_associated_SNPs_23948 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66039220-66039320
64251 chr1 161326611 161326611 1 + G A HNSC 161326622 + 161326602 161326642 41 ATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTC ATCATACCTAGAATGGGATCCGACACTTGGTAAGTTAATTC < 41bp 1 0.522729711778792 1 0.382539927959442 experiment 0.954540576442416 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHC ENSG00000143252 CDS Human protein_coding chr1:161326622 chr1:161326611 stopgain 0.976 1 10 hm5C_associated_SNPs_23949 0 0 4 PUM2 POSTAR2 ENCODE chr1:161326571-161326632
64251 chr16 705335 705335 1 + C T HNSC 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGTGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT < 41bp 1 0.49621745615477 1 0.401052474975586 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705335 nonsynonymous SNV 0.922 3 9 hm5C_associated_SNPs_23953 0 0 4 BUD13 POSTAR2 ENCODE chr16:705318-705337
64251 chr22 39826098 39826098 1 + C T HNSC 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTTCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA < 41bp 1 0.105096582739703 1 0.17353230714798 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826098 synonymous SNV . 0 6 hm5C_associated_SNPs_23956 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr6 33633651 33633651 1 + C A HNSC 33633637 + 33633617 33633657 41 TCATCCAGCTGCTGGAAGACCTGGTGTTCTTTGTCAGCGAT TCATCCAGCTGCTGGAAGACCTGGTGTTCTTTGTAAGCGAT < 41bp 1 0.420845708448222 1 0.196490347385406 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33633637 chr6:33633651 synonymous SNV . 0 35 hm5C_associated_SNPs_23957 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33633644-33633664
64251 chr11 9462025 9462025 1 + G A HNSC 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATAAT < 41bp 1 0.609318835995741 1 0.454091876745224 experiment 0.781362328008518 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462025 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_23958 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr11 9462019 9462019 1 + G A HNSC 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGAGGAACTGGGGAGTGATAAAGATGAT < 41bp 1 0.619516413979638 1 0.470552891492844 experiment 0.760967172040723 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462019 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_23959 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr1 151006632 151006632 1 + C G HNSC 151006621 + 151006601 151006641 41 AGTGCCCTCTAGATCAGGGGCTGCCTAAACTCTCTGCTGAG AGTGCCCTCTAGATCAGGGGCTGCCTAAACTGTCTGCTGAG < 41bp 1 0.360575314704538 1 0.11042594909668 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006621 chr1:151006632 synonymous SNV . 0 32 hm5C_associated_SNPs_23960 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006623-151006651
64251 chr15 77241521 77241521 1 + C A HNSC 77241508 + 77241488 77241528 41 CTTGTTTCTCACCAGTGAAGCCACAGATTATGGCAGACAGC CTTGTTTCTCACCAGTGAAGCCACAGATTATGGAAGACAGC < 41bp 1 0.40084015121176 1 0.142463594675064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RCN2 ENSG00000117906 CDS Human protein_coding chr15:77241508 chr15:77241521 synonymous SNV . 0 34 hm5C_associated_SNPs_23961 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:77241407-77242243
64251 chr6 30547717 30547717 1 + G A HNSC 30547729 + 30547709 30547749 41 CCGTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG CCGTATCTAAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG < 41bp 1 0.0548648930325445 1 0.127831727266312 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547729 chr6:30547717 nonsynonymous SNV 0.979 0 9 hm5C_associated_SNPs_23963 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr6:30547674-30547725
64251 chr6 30547717 30547717 1 + G A HNSC 30547735 + 30547715 30547755 41 CTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAGGGAAAG CTAAGGAACAGCAGCCTGCACTCAAGGGCAAAAAGGGAAAG < 41bp 1 0.5601424021401 1 0.328448534011841 experiment 0.8797151957198 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547735 chr6:30547717 nonsynonymous SNV 0.979 0 3 hm5C_associated_SNPs_23964 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr6:30547674-30547725
64251 chr5 176709482 176709482 1 + A C HNSC 176709496 + 176709476 176709516 41 TGAATGAGTATGTGGGTGAGCTTATAGATGAAGAAGAATGC TGAATGCGTATGTGGGTGAGCTTATAGATGAAGAAGAATGC < 41bp 1 0.0282585690862621 1 0.0618838667869568 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176709496 chr5:176709482 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_23965 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:176709460-176709500
64251 chr2 235951012 235951012 1 + G T HNSC 235950995 + 235950975 235951015 41 TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAGGCCC TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAGTCCC < 41bp 1 0.212217673462189 1 0.581993758678436 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950995 chr2:235951012 nonsynonymous SNV 0.943 1 38 hm5C_associated_SNPs_23966 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235951000-235951029
64251 chr14 69704350 69704350 1 + A T HNSC 69704365 + 69704345 69704385 41 ACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC ACCACTACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC < 41bp 1 0.513972034595044 1 0.0930755138397217 experiment 0.972055930809912 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXD2 ENSG00000081177 CDS Human protein_coding chr14:69704365 chr14:69704350 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_23967 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:69704334-69704353
64251 chr17 79418800 79418800 1 + G A HNSC 79418808 + 79418788 79418828 41 CACTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCAGCG CACTGCCCCAGCACAGCCGCCCACAGCCAACCCCTGCAGCG < 41bp 1 0.121890209997383 1 0.0703894197940826 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BAHCC1 ENSG00000171282 CDS Human other chr17:79418808 chr17:79418800 synonymous SNV . 0 13 hm5C_associated_SNPs_23968 0 0 1 DDX6 POSTAR2 ENCODE chr17:79418774-79418834
64251 chr5 147819261 147819261 1 + C G HNSC 147819249 + 147819229 147819269 41 AGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGT AGCAGAAGCTATTTAGTGGTCCCTACCCCTATGACATCTGT < 41bp 1 0.217867009502366 1 0.0534871220588684 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819249 chr5:147819261 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_23970 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819261 147819261 1 + C G HNSC 147819251 + 147819231 147819271 41 CAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTAT CAGAAGCTATTTAGTGGTCCCTACCCCTATGACATCTGTAT < 41bp 1 0.129005656670887 1 0.0516937673091888 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819251 chr5:147819261 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_23971 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819261 147819261 1 + C G HNSC 147819256 + 147819236 147819276 41 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCC GCTATTTAGTGGTCCCTACCCCTATGACATCTGTATTATCC < 41bp 1 0.124633820877563 1 0.215600520372391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819256 chr5:147819261 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_23972 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819261 147819261 1 + C G HNSC 147819257 + 147819237 147819277 41 CTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCA CTATTTAGTGGTCCCTACCCCTATGACATCTGTATTATCCA < 41bp 1 0.200176876797356 1 0.363972723484039 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819257 chr5:147819261 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_23973 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr12 53671305 53671305 1 + G A HNSC 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT GAGGAATTTAAAGTCAATGACCTGAACTATGAAGATAAACT < 41bp 1 0.0548826153903518 1 0.0393885672092438 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671305 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_23974 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53671268-53671306
64251 chr3 126708596 126708596 1 + G A HNSC 126708579 + 126708559 126708599 41 TCCTGCTACCGTGGTGAGGGCAAGCTCTCCCTGCCGTGGCT TCCTGCTACCGTGGTGAGGGCAAGCTCTCCCTGCCGTAGCT < 41bp 1 0.125411361964012 1 0.408017545938492 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126708579 chr3:126708596 stopgain 0.929 1 38 hm5C_associated_SNPs_23975 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:126708572-126708606
64251 chr19 47763905 47763905 1 + A T HNSC 47763890 + 47763870 47763910 41 GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGG GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCTAGGGG < 41bp 1 0.201279350614639 1 0.235941588878632 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763890 chr19:47763905 stopgain 0.982 0 36 hm5C_associated_SNPs_23976 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763905 47763905 1 + A T HNSC 47763891 + 47763871 47763911 41 GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGG GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCTAGGGGG < 41bp 1 0.72167129178451 1 0.38571885228157 experiment 0.55665741643098 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763891 chr19:47763905 stopgain 0.982 0 35 hm5C_associated_SNPs_23977 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763905 47763905 1 + A T HNSC 47763892 + 47763872 47763912 41 TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCTAGGGGGG < 41bp 1 0.405318152382171 1 0.484268188476562 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763892 chr19:47763905 stopgain 0.982 0 34 hm5C_associated_SNPs_23978 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763905 47763905 1 + A T HNSC 47763893 + 47763873 47763913 41 CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCTAGGGGGGC < 41bp 1 0.588347298655556 1 0.73075407743454 experiment 0.823305402688888 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763893 chr19:47763905 stopgain 0.982 0 33 hm5C_associated_SNPs_23979 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763905 47763905 1 + A T HNSC 47763913 + 47763893 47763933 41 CCAGGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGG CCAGGGGCCAGCTAGGGGGGCCGGACTCCTCCACAGCAGGG < 41bp 1 0.523938086766908 1 0.428337007761002 experiment 0.952123826466184 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763913 chr19:47763905 stopgain 0.982 0 13 hm5C_associated_SNPs_23980 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chrX 1720159 1720159 1 + G A HNSC 1720158 + 1720138 1720178 41 ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGGAGAC ACCGGGAGCCCAGCAAGGGCCAGGGCCGGGCCACCGGAGAC < 41bp 1 0.764193023993598 1 0.879277288913727 experiment 0.471613952012804 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1720158 chrX:1720159 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_23981 0 0 1 EIF3H POSTAR2 ENCODE chrX:1720146-1720248
64251 chr1 78325024 78325024 1 + G C HNSC 78325041 + 78325021 78325061 41 GGAGACAGTGATTTTCTTGCCAAACTTCACTGTATTCGACA GGACACAGTGATTTTCTTGCCAAACTTCACTGTATTCGACA < 41bp 1 0.209356797421082 1 0.142018228769302 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MIGA1 ENSG00000180488 CDS Human protein_coding chr1:78325041 chr1:78325024 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_23982 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:78324993-78325026
64251 chr9 100425264 100425264 1 + G A HNSC 100425251 + 100425231 100425271 41 AAAAGGTTTCATGAAGTCTTCAAAACCCTAGCTGAAAGTGA AAAAGGTTTCATGAAGTCTTCAAAACCCTAGCTAAAAGTGA < 41bp 1 0.234751777070557 1 0.517305254936218 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100425251 chr9:100425264 nonsynonymous SNV 0.996 1 34 hm5C_associated_SNPs_23983 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:100425241-100425295
64251 chrX 41048594 41048594 1 + C T HNSC 41048581 + 41048561 41048601 41 GACCAATGCAGGCAATGAGCCAGACTTGGAAGACGAACAGG GACCAATGCAGGCAATGAGCCAGACTTGGAAGATGAACAGG < 41bp 1 0.166694844796217 1 0.433756530284882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41048581 chrX:41048594 synonymous SNV . 0 34 hm5C_associated_SNPs_23984 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:41048560-41048600
64251 chr7 65751528 65751528 1 + G A HNSC 65751509 + 65751489 65751529 41 TGTTTTCAGAGTGGAGAGATCTACAGACCAAGTAATCAAGC TGTTTTCAGAGTGGAGAGATCTACAGACCAAGTAATCAAAC < 41bp 1 0.635732058327088 1 0.442680537700653 experiment 0.728535883345825 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TPST1 ENSG00000169902 CDS Human protein_coding chr7:65751509 chr7:65751528 synonymous SNV . 0 40 hm5C_associated_SNPs_23987 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:65751516-65751551
64251 chr6 30860256 30860256 1 + C T HNSC 30860273 + 30860253 30860293 41 TTTCTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACT TTTTTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACT < 41bp 1 0.283613904616037 1 0.0968198478221893 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30860273 chr6:30860256 synonymous SNV . 0 4 hm5C_associated_SNPs_23988 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:30860252-30860266
64251 chr8 104343656 104343656 1 + C G HNSC 104343665 + 104343645 104343685 41 CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCC CCAAGCAGCCTGAAAGGTTCCACATCTCTGCTTGTTCACCC < 41bp 1 0.55124494209921 1 0.0575250089168549 experiment 0.897510115801581 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343665 chr8:104343656 synonymous SNV . 0 12 hm5C_associated_SNPs_23997 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr19 16314374 16314374 1 + C T HNSC 16314393 + 16314373 16314413 41 TCCTGGCCCACGGGGGGGTCCGTTTCATGTGGATCAAACAC TTCTGGCCCACGGGGGGGTCCGTTTCATGTGGATCAAACAC < 41bp 1 0.0871270130254072 1 0.167800456285477 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16314393 chr19:16314374 synonymous SNV . 0 2 hm5C_associated_SNPs_23998 0 0 3 DDX3X POSTAR2 ENCODE chr19:16314304-16314387
64251 chr17 55075841 55075841 1 + G T HNSC 55075847 + 55075827 55075867 41 TCAAAATTATTCCTGAGGATCAATCCTGGGGAGGTACTTAT TCAAAATTATTCCTTAGGATCAATCCTGGGGAGGTACTTAT < 41bp 1 0.10106217003506 1 0.0596193671226501 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55075847 chr17:55075841 stopgain 0.926 0 15 hm5C_associated_SNPs_23999 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:55075816-55075847
64251 chr12 95868071 95868071 1 + G C HNSC 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAACACGAAAGA < 41bp 1 0.344351028118365 1 0.539569616317749 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868071 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_24000 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr5 14291310 14291310 1 + G A HNSC 14291323 + 14291303 14291343 41 TCCAGCTGAGGCTGTTTGAACAGGATGCTGAGAAGGTAAAG TCCAGCTAAGGCTGTTTGAACAGGATGCTGAGAAGGTAAAG < 41bp 1 0.514136781789559 1 0.70270049571991 experiment 0.971726436420883 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14291323 chr5:14291310 synonymous SNV . 0 8 hm5C_associated_SNPs_24001 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:14291265-14291321
64251 chr5 176519745 176519745 1 + C T HNSC 176519758 + 176519738 176519778 41 ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG ATTCCATTGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG < 41bp 1 0.347222915681765 1 0.252241671085358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176519758 chr5:176519745 synonymous SNV . 0 8 hm5C_associated_SNPs_24003 0 0 2 YBX3 POSTAR2 ENCODE chr5:176519663-176519786
64251 chr20 47691914 47691914 1 + G C HNSC 47691921 + 47691901 47691941 41 ATGCAAGTTTTTTGAGGGACCTGTGACAGGAATCTTCTCTG ATGCAAGTTTTTTCAGGGACCTGTGACAGGAATCTTCTCTG < 41bp 1 0.507572158057377 1 0.294566512107849 experiment 0.984855683885247 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47691921 chr20:47691914 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_24004 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47691900-47691920
64251 chr19 50902122 50902122 1 + G A HNSC 50902140 + 50902120 50902160 41 GCGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG GCAGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG < 41bp 1 0.512366883457633 1 0.68350213766098 experiment 0.975266233084734 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902140 chr19:50902122 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_24005 1 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr19 50902122 50902122 1 + G A HNSC 50902141 + 50902121 50902161 41 CGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC CAGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC < 41bp 1 0.740271299727018 1 0.807937502861023 experiment 0.519457400545963 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902141 chr19:50902122 nonsynonymous SNV 0.999 1 2 hm5C_associated_SNPs_24006 1 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr22 20755021 20755021 1 + G C HNSC 20755030 + 20755010 20755050 41 ATGTGATGTTGGAGAACTACCAGAACCTTCTTGCCCTAGGT ATGTGATGTTGCAGAACTACCAGAACCTTCTTGCCCTAGGT < 41bp 1 0.704080707787985 1 0.553747534751892 experiment 0.59183858442403 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20755030 chr22:20755021 nonsynonymous SNV 0.998 3 12 hm5C_associated_SNPs_24008 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:20754991-20755039
64251 chr22 30038255 30038255 1 + C T HNSC 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTGAGGCTTCTGTGCTCCTGGCTTTTTACGCCGTCCAG < 41bp 1 0.657675514844811 1 0.237353056669235 experiment 0.684648970310377 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038255 nonsynonymous SNV 0.882 4 28 hm5C_associated_SNPs_24009 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr22:30038221-30038256
64251 chr22 38258977 38258977 1 + G A HNSC 38258983 + 38258963 38259003 41 GTTTTCTTTACAGGGGGGACCTTCCTTGGAGCAGAGGTTTG GTTTTCTTTACAGGAGGGACCTTCCTTGGAGCAGAGGTTTG < 41bp 1 0.0676454539018355 1 0.193387418985367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38258983 chr22:38258977 nonsynonymous SNV 0.997 2 15 hm5C_associated_SNPs_24010 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:38258954-38258977
64251 chr11 65396095 65396095 1 + C T HNSC 65396110 + 65396090 65396130 41 CGTTTCGTGCTGACCTACATCGCGCCCTGGCAGATCACCTG CGTTTTGTGCTGACCTACATCGCGCCCTGGCAGATCACCTG < 41bp 1 0.509478921076695 1 0.56300950050354 experiment 0.981042157846611 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65396110 chr11:65396095 synonymous SNV . 0 6 hm5C_associated_SNPs_24011 0 0 1 PPIG POSTAR2 ENCODE chr11:65396063-65396102
64251 chr1 40525048 40525048 1 + A T HNSC 40525031 + 40525011 40525051 41 GGTCCATTATGGCTGACATGCAAAATCTGGTAGAAAGATTG GGTCCATTATGGCTGACATGCAAAATCTGGTAGAAAGTTTG < 41bp 1 0.566609929032918 1 0.70043683052063 experiment 0.866780141934163 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAP1 ENSG00000131236 CDS Human protein_coding chr1:40525031 chr1:40525048 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_24012 0 0 23 TARDBP POSTAR2 DRA001158,DRS012387 chr1:40525025-40525061
64251 chr7 98563391 98563391 1 + G A HNSC 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATGAGCATGGAGATGCAGAAGAACTT < 41bp 1 0.184343492602665 1 0.390172958374023 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563391 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_24013 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr7:98563380-98563400
64251 chr1 183083794 183083794 1 + G C HNSC 183083799 + 183083779 183083819 41 TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAA TGTGAGAGGTGCCGACAGAACTTCTTCCGCCTTGGCAACAA < 41bp 1 0.398274205710095 1 0.151609361171722 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083799 chr1:183083794 nonsynonymous SNV 0.966 2 16 hm5C_associated_SNPs_24014 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:183083765-183083814
64251 chr5 74638523 74638523 1 + G A HNSC 74638509 + 74638489 74638529 41 TCATAGTGGGGACAGTGACACTGACCATCTGCATGATGTCC TCATAGTGGGGACAGTGACACTGACCATCTGCATAATGTCC < 41bp 1 0.316133536032819 1 0.123882442712784 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGCR ENSG00000113161 CDS Human protein_coding chr5:74638509 chr5:74638523 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_24015 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:74638503-74638589
64251 chr5 115628170 115628170 1 + T C HNSC 115628155 + 115628135 115628175 41 TCTTTGTAAATAGCTAGAGACTATACAAGCACAGCTGGATT TCTTTGTAAATAGCTAGAGACTATACAAGCACAGCCGGATT < 41bp 1 0.385505214895597 1 0.42743057012558 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COMMD10 ENSG00000145781 CDS Human protein_coding chr5:115628155 chr5:115628170 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_24016 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr5:115628163-115628183
64251 chr8 145662239 145662239 1 - T C HNSC 145662226 - 145662206 145662246 41 GCTGCGAAGGCATCACCCCCCTCCACGATGCCCTCAACTGT GCTGCGAGGGCATCACCCCCCTCCACGATGCCCTCAACTGT < 41bp 1 0.64587265385943 1 0.89185893535614 experiment 0.708254692281139 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TONSL ENSG00000160949 CDS Human protein_coding chr8:145662226 chr8:145662239 synonymous SNV . 0 8 hm5C_associated_SNPs_24017 0 0 1 DDX42 POSTAR2 ENCODE chr8:145662236-145662291
64251 chr20 33033227 33033227 1 + A T HNSC 33033240 + 33033220 33033260 41 AGCTTCAAGGAGCAATGCAGCAGTTTAACCAGAGATTCATT AGCTTCATGGAGCAATGCAGCAGTTTAACCAGAGATTCATT < 41bp 1 0.202011048459529 1 0.37555006146431 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ITCH ENSG00000078747 CDS Human protein_coding chr20:33033240 chr20:33033227 nonsynonymous SNV 0.999 3 8 hm5C_associated_SNPs_24018 0 0 2 UCHL5 POSTAR2 ENCODE chr20:33033133-33033233
64251 chr7 138944065 138944065 1 + A G HNSC 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAAGCGGAAGCGGAAAGGGGAAGGGGAAAAG < 41bp 1 0.538543202975917 1 0.596090793609619 experiment 0.922913594048167 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944065 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_24020 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr5 44815101 44815101 1 + C T HNSC 44815097 + 44815077 44815117 41 AAATACTTTTCCTTTTTCTGCTACCAGCTAAATACTTTGGC AAATACTTTTCCTTTTTCTGCTACTAGCTAAATACTTTGGC < 41bp 1 0.189525378782859 1 0.0819256007671356 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44815097 chr5:44815101 stopgain 1.000 1 25 hm5C_associated_SNPs_24021 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:44815075-44815161
64251 chr3 183855540 183855540 1 + G A HNSC 183855522 + 183855502 183855542 41 GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTATA < 41bp 1 0.41157195652398 1 0.0923889875411987 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183855522 chr3:183855540 synonymous SNV . 0 39 hm5C_associated_SNPs_24022 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:183855511-183855543
64251 chr8 28906499 28906499 1 + A T HNSC 28906481 + 28906461 28906501 41 TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGATAGA TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGATTGA < 41bp 1 0.266178621397999 1 0.685808777809143 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906481 chr8:28906499 synonymous SNV . 0 39 hm5C_associated_SNPs_24024 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr8 28906499 28906499 1 + A T HNSC 28906512 + 28906492 28906532 41 ATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT ATGGGATTGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT < 41bp 1 0.54382320291201 1 0.52836287021637 experiment 0.912353594175981 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906512 chr8:28906499 synonymous SNV . 0 8 hm5C_associated_SNPs_24025 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr2 207651558 207651558 1 + A T HNSC 207651570 + 207651550 207651590 41 GATGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGC GATGAATTTCTTTCCCCTGGCTCCTTTTAATCAGCTTCTGC < 41bp 1 0.318696037981104 1 0.0853344202041626 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651570 chr2:207651558 nonsynonymous SNV 0.421 1 9 hm5C_associated_SNPs_24027 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr2 207651558 207651558 1 + A T HNSC 207651572 + 207651552 207651592 41 TGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGCAA TGAATTTCTTTCCCCTGGCTCCTTTTAATCAGCTTCTGCAA < 41bp 1 0.0317314733487076 1 0.0139807164669037 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651572 chr2:207651558 nonsynonymous SNV 0.421 1 7 hm5C_associated_SNPs_24028 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr10 127512150 127512150 1 + T A HNSC 127512131 + 127512111 127512151 41 CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGCGGCGTG CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGCGGCGAG < 41bp 1 0.364469459054531 1 0.280750751495361 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCCIP ENSG00000107949 CDS Human protein_coding chr10:127512131 chr10:127512150 synonymous SNV . 0 40 hm5C_associated_SNPs_24029 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:127512140-127512160
64251 chrX 19373837 19373837 1 + G A HNSC 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCCGAGAGACAACAAGGTTTGCTGCTGCCT < 41bp 1 0.655817246918713 1 0.532493531703949 experiment 0.688365506162574 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373837 nonsynonymous SNV 0.998 5 20 hm5C_associated_SNPs_24032 0 0 6 DDX24 POSTAR2 ENCODE chrX:19373815-19373881
64251 chr7 155534637 155534637 1 + G A HNSC 155534638 + 155534618 155534658 41 ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGC ATAGAAATGAGCAGCAGCCACTGCTCTGCCACGCCCTCAGC < 41bp 1 0.480681949313989 1 0.168309956789017 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534638 chr7:155534637 nonsynonymous SNV 0.015 2 20 hm5C_associated_SNPs_24034 0 0 3 GRWD1 POSTAR2 ENCODE chr7:155534586-155534662
64251 chr19 1255048 1255048 1 + G A HNSC 1255058 + 1255038 1255078 41 GGTCTTCTCAGGGACCTTCTCTGGTAGGTGTCACAGCACAT GGTCTTCTCAAGGACCTTCTCTGGTAGGTGTCACAGCACAT < 41bp 1 0.652852123817784 1 0.416120141744614 experiment 0.694295752364432 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1255058 chr19:1255048 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_24037 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:1254994-1255053
64251 chr11 6414491 6414491 1 + C T HNSC 6414500 + 6414480 6414520 41 GGTCTCCGCCTCATCTCTCTCAATATGAATTTTTGTTCCCG GGTCTCCGCCTTATCTCTCTCAATATGAATTTTTGTTCCCG < 41bp 1 0.419801885369215 1 0.702865481376648 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6414500 chr11:6414491 nonsynonymous SNV . 0 12 hm5C_associated_SNPs_24038 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:6414451-6414505
64251 chr13 111287916 111287916 1 + C G HNSC 111287910 + 111287890 111287930 41 GTGGTCCAGAAAGGAGAGCGCGACATCCTCTCCAACGGCCA GTGGTCCAGAAAGGAGAGCGCGACATGCTCTCCAACGGCCA < 41bp 1 0.773864488235496 1 0.436787247657776 experiment 0.452271023529007 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111287910 chr13:111287916 nonsynonymous SNV 0.003 2 27 hm5C_associated_SNPs_24039 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111287898-111287936
64251 chr19 5667168 5667168 1 + C G HNSC 5667169 + 5667149 5667189 41 GGGCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACA GGGCCGGGGGCTGCCTCCTGCCCCCAGGTTTGTGTCCCACA < 41bp 1 0.20930276615298 1 0.141305357217789 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667169 chr19:5667168 nonsynonymous SNV 0.995 1 20 hm5C_associated_SNPs_24040 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667168 5667168 1 + C G HNSC 5667171 + 5667151 5667191 41 GCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACC GCCGGGGGCTGCCTCCTGCCCCCAGGTTTGTGTCCCACACC < 41bp 1 0.543995443158361 1 0.162350535392761 experiment 0.912009113683277 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667171 chr19:5667168 nonsynonymous SNV 0.995 1 18 hm5C_associated_SNPs_24041 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667168 5667168 1 + C G HNSC 5667172 + 5667152 5667192 41 CCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCC CCGGGGGCTGCCTCCTGCCCCCAGGTTTGTGTCCCACACCC < 41bp 1 0.628563816075231 1 0.592724561691284 experiment 0.742872367849539 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667172 chr19:5667168 nonsynonymous SNV 0.995 1 17 hm5C_associated_SNPs_24042 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667168 5667168 1 + C G HNSC 5667173 + 5667153 5667193 41 CGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCCG CGGGGGCTGCCTCCTGCCCCCAGGTTTGTGTCCCACACCCG < 41bp 1 0.726937494670533 1 0.666199803352356 experiment 0.546125010658935 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667173 chr19:5667168 nonsynonymous SNV 0.995 1 16 hm5C_associated_SNPs_24043 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr16 1823374 1823374 1 + G C HNSC 1823378 + 1823358 1823398 41 TCGGAGGCCGCCGCGAGAGCCCGGGACCCAGCGGGTGAGCG TCGGAGGCCGCCGCGACAGCCCGGGACCCAGCGGGTGAGCG < 41bp 1 0.576181406678058 1 0.803494215011597 experiment 0.847637186643884 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1823378 chr16:1823374 nonsynonymous SNV 0.001 0 17 hm5C_associated_SNPs_24044 0 0 4 BUD13 POSTAR2 ENCODE chr16:1823348-1823383
64251 chr17 57725621 57725621 1 + T A HNSC 57725620 + 57725600 57725640 41 GCAAAATCGTGTGGTGGGAGCTATGCAGCTATATTCTGTAG GCAAAATCGTGTGGTGGGAGCAATGCAGCTATATTCTGTAG < 41bp 1 0.223470476284165 1 0.181329548358917 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57725620 chr17:57725621 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_24045 0 0 14 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:57725620-57725640
64251 chr7 44802519 44802519 1 + G A HNSC 44802539 + 44802519 44802559 41 GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT ATCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT < 41bp 1 0.0283469944220709 1 0.0226182341575623 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802539 chr7:44802519 nonsynonymous SNV 0.011 3 1 hm5C_associated_SNPs_24048 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44802519-44802543
64251 chr19 18254654 18254654 1 + G A HNSC 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC CAGCCCATCTCTCCTAAATACCATCAGCCTGGACACAATGC < 41bp 1 0.013492041275767 1 0.0109895467758179 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254654 synonymous SNV . 0 16 hm5C_associated_SNPs_24050 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:18254654-18254676
64251 chr20 30898675 30898675 1 + C G HNSC 30898670 + 30898650 30898690 41 AATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA AATTCCAGGAAGAGATTGCTCGGCTGAAGGCCCAGCTGGAA < 41bp 1 0.743661038422283 1 0.780260443687439 experiment 0.512677923155434 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898670 chr20:30898675 synonymous SNV . 0 26 hm5C_associated_SNPs_24051 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:30898663-30898687
64251 chr17 70119078 70119078 1 + G A HNSC 70119073 + 70119053 70119093 41 GCCGACTCGCCACACTCCTCCTCCGGCATGAGCGAGGTGCA GCCGACTCGCCACACTCCTCCTCCGACATGAGCGAGGTGCA < 41bp 1 0.547732634839572 1 0.87067848443985 experiment 0.904534730320856 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119073 chr17:70119078 nonsynonymous SNV 0.940 3 26 hm5C_associated_SNPs_24061 0 0 1 RPS3 POSTAR2 ENCODE chr17:70119055-70119114
64251 chr2 173429336 173429336 1 + C G HNSC 173429352 + 173429332 173429372 41 CTGTCACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTC CTGTGACCAGCCAGAATGTTCAGTACTTTTTGGATCGATTC < 41bp 1 0.533135222645881 1 0.0444088280200958 experiment 0.933729554708238 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PDK1 ENSG00000152256 CDS Human protein_coding chr2:173429352 chr2:173429336 synonymous SNV . 0 5 hm5C_associated_SNPs_24064 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:173429313-173429345
64251 chr10 106019428 106019428 1 + G A HNSC 106019431 + 106019411 106019451 41 TTCTGGAAAACAGTCAGGGTCAGCTGATCTACGAGTCTGCC TTCTGGAAAACAGTCAGAGTCAGCTGATCTACGAGTCTGCC < 41bp 1 0.634488015033983 1 0.559540688991547 experiment 0.731023969932034 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106019431 chr10:106019428 nonsynonymous SNV 0.993 3 18 hm5C_associated_SNPs_24065 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr10:106019387-106019437
64251 chr1 53676457 53676457 1 + G A HNSC 53676443 + 53676423 53676463 41 TATCGCCAAGGATGGCTCTACTGCCGTCCACTTTGAGCACT TATCGCCAAGGATGGCTCTACTGCCGTCCACTTTAAGCACT < 41bp 1 0.38767201395755 1 0.116598099470139 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676443 chr1:53676457 nonsynonymous SNV 0.914 5 35 hm5C_associated_SNPs_24066 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:53676442-53676460
64251 chr19 49404064 49404064 1 + C T HNSC 49404083 + 49404063 49404103 41 TCTGGGCCCCGAGGAACCCTCCTTCTGTTGCCGCTGCTGCT TTTGGGCCCCGAGGAACCCTCCTTCTGTTGCCGCTGCTGCT < 41bp 1 0.0271321537151338 1 0.0491861701011658 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49404083 chr19:49404064 nonsynonymous SNV 0.089 1 2 hm5C_associated_SNPs_24067 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:49404053-49404072
64251 chr9 139734271 139734271 1 + C T HNSC 139734259 + 139734239 139734279 41 GCCTTCAGACTGAAGAATGACTCGGACCTCTTCGGGCTGGG GCCTTCAGACTGAAGAATGACTCGGACCTCTTTGGGCTGGG < 41bp 1 0.687759955291417 1 0.455679148435593 experiment 0.624480089417167 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734259 chr9:139734271 synonymous SNV . 0 33 hm5C_associated_SNPs_24068 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734271 139734271 1 + C T HNSC 139734265 + 139734245 139734285 41 AGACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGA AGACTGAAGAATGACTCGGACCTCTTTGGGCTGGGGCTGGA < 41bp 1 0.0735406320909288 1 0.0870526432991028 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734265 chr9:139734271 synonymous SNV . 0 27 hm5C_associated_SNPs_24069 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734271 139734271 1 + C T HNSC 139734266 + 139734246 139734286 41 GACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG GACTGAAGAATGACTCGGACCTCTTTGGGCTGGGGCTGGAG < 41bp 1 0.139622622172462 1 0.273324310779572 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734266 chr9:139734271 synonymous SNV . 0 26 hm5C_associated_SNPs_24070 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734268 139734268 1 + C T HNSC 139734259 + 139734239 139734279 41 GCCTTCAGACTGAAGAATGACTCGGACCTCTTCGGGCTGGG GCCTTCAGACTGAAGAATGACTCGGACCTTTTCGGGCTGGG < 41bp 1 0.639534101395067 1 0.555086374282837 experiment 0.720931797209866 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734259 chr9:139734268 synonymous SNV . 0 30 hm5C_associated_SNPs_24071 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734268 139734268 1 + C T HNSC 139734265 + 139734245 139734285 41 AGACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGA AGACTGAAGAATGACTCGGACCTTTTCGGGCTGGGGCTGGA < 41bp 1 0.023782081568199 1 0.0430014133453369 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734265 chr9:139734268 synonymous SNV . 0 24 hm5C_associated_SNPs_24072 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734268 139734268 1 + C T HNSC 139734266 + 139734246 139734286 41 GACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG GACTGAAGAATGACTCGGACCTTTTCGGGCTGGGGCTGGAG < 41bp 1 0.0384479963022147 1 0.0558927953243256 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734266 chr9:139734268 synonymous SNV . 0 23 hm5C_associated_SNPs_24073 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734268 139734268 1 + C T HNSC 139734271 + 139734251 139734291 41 AAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC AAGAATGACTCGGACCTTTTCGGGCTGGGGCTGGAGGAGGC < 41bp 1 0.771880880832218 1 0.915611803531647 experiment 0.456238238335563 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734271 chr9:139734268 synonymous SNV . 0 18 hm5C_associated_SNPs_24074 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr7 135272732 135272732 1 + C G HNSC 135272723 + 135272703 135272743 41 ATCTAGGGGTGGCTCATCAGCGGCCCCCTCAACGCCAGGTG ATCTAGGGGTGGCTCATCAGCGGCCCCCTGAACGCCAGGTG < 41bp 1 0.439279257188651 1 0.599902033805847 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135272723 chr7:135272732 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_24075 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr7:135272712-135272741
64251 chr5 142264901 142264901 1 + T C HNSC 142264910 + 142264890 142264930 41 ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTT ACAGAAAAGTACTGTGGCATCTTAGAAAAACACTTGAATTT < 41bp 1 0.132265983733841 1 0.343417346477509 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142264910 chr5:142264901 synonymous SNV . 0 12 hm5C_associated_SNPs_24077 0 0 1 GRWD1 POSTAR2 ENCODE chr5:142264899-142264965
64251 chr10 70525798 70525798 1 + G C HNSC 70525803 + 70525783 70525823 41 TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAAGA TTGAGTGTCCTATTGCACTACAGATTAGAGGATAATAAAGA < 41bp 1 0.223664778614338 1 0.400704860687256 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70525803 chr10:70525798 nonsynonymous SNV 0.944 4 16 hm5C_associated_SNPs_24078 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70525699-70525836
64251 chr11 73074856 73074856 1 + G A HNSC 73074840 + 73074820 73074860 41 ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGCGGC ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATACGGC < 41bp 1 0.369421468692335 1 0.201722294092178 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73074840 chr11:73074856 nonsynonymous SNV 0.971 1 37 hm5C_associated_SNPs_24079 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73074798-73074863
64251 chr16 29994473 29994473 1 + C T HNSC 29994488 + 29994468 29994508 41 ATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGC ATCAGTGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGC < 41bp 1 0.325637886492956 1 0.281599819660187 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994488 chr16:29994473 synonymous SNV . 0 6 hm5C_associated_SNPs_24080 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:29994460-29994480
64251 chr16 29994473 29994473 1 + C T HNSC 29994493 + 29994473 29994513 41 CGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG TGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG < 41bp 1 0.0709512575008634 1 0.131417721509933 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994493 chr16:29994473 synonymous SNV . 0 1 hm5C_associated_SNPs_24081 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:29994460-29994480
64251 chr5 179143227 179143227 1 + C T HNSC 179143220 + 179143200 179143240 41 TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGG TTCACGTGAAATTGAGGACCCAGAAGATCGGAAGCCCGAGG < 41bp 1 0.788306958685166 1 0.704348027706146 experiment 0.423386082629668 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179143220 chr5:179143227 synonymous SNV . 0 28 hm5C_associated_SNPs_24082 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179143107-179143246
64251 chr10 79797023 79797023 1 + C T HNSC 79797031 + 79797011 79797051 41 AATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTG AATGAAGAAAGTTAGGGGGACTGCAAAGGCCAATGTTGGTG < 41bp 1 0.675365310120216 1 0.329119652509689 experiment 0.649269379759569 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797031 chr10:79797023 synonymous SNV . 0 13 hm5C_associated_SNPs_24083 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797023 79797023 1 + C T HNSC 79797034 + 79797014 79797054 41 GAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTG GAAGAAAGTTAGGGGGACTGCAAAGGCCAATGTTGGTGCTG < 41bp 1 0.626028529633522 1 0.689060747623444 experiment 0.747942940732956 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797034 chr10:79797023 synonymous SNV . 0 10 hm5C_associated_SNPs_24084 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr10 79797023 79797023 1 + C T HNSC 79797041 + 79797021 79797061 41 GTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAA GTTAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAA < 41bp 1 0.410838710720397 1 0.12755760550499 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS24 ENSG00000138326 CDS Human protein_coding chr10:79797041 chr10:79797023 synonymous SNV . 0 3 hm5C_associated_SNPs_24085 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:79796983-79797056
64251 chr5 102472491 102472491 1 + C T HNSC 102472507 + 102472487 102472527 41 TAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGG TAATTAATGACTTGAATATGCAGTATCTCATACAAGATAGG < 41bp 1 0.374908127115578 1 0.180243670940399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102472507 chr5:102472491 synonymous SNV . 0 5 hm5C_associated_SNPs_24087 0 0 1 ZNF622 POSTAR2 ENCODE chr5:102472471-102472526
64251 chr14 102455173 102455173 1 + G C HNSC 102455186 + 102455166 102455206 41 CCTGGTGGAGAGCCAAAGATCAAAGTGAGTGCTTCTGTGGC CCTGGTGCAGAGCCAAAGATCAAAGTGAGTGCTTCTGTGGC < 41bp 1 0.171188131088139 1 0.526167213916779 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102455186 chr14:102455173 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_24088 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102455077-102455179
64251 chr17 38450695 38450695 1 + G C HNSC 38450687 + 38450667 38450707 41 CTAGAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT CTAGAGAAAAATGTAAGCCACAGCTGTTCAACTTCCCACCT < 41bp 1 0.533803635567738 1 0.12940588593483 experiment 0.932392728864523 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450687 chr17:38450695 nonsynonymous SNV 0.992 3 29 hm5C_associated_SNPs_24090 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38450644-38450700
64251 chr9 140622883 140622883 1 + C G HNSC 140622869 + 140622849 140622889 41 AAGGAACCAAAAGAGGAGATCAACAAAAACATTTCTGACTT AAGGAACCAAAAGAGGAGATCAACAAAAACATTTGTGACTT < 41bp 1 0.458198566220075 1 0.599293172359467 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140622869 chr9:140622883 nonsynonymous SNV 0.372 2 35 hm5C_associated_SNPs_24091 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr9:140622866-140622891
64251 chr17 7752247 7752247 1 + G A HNSC 7752242 + 7752222 7752262 41 TACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCG TACCTCAGGCGGGCCCTGGGCCCGGAAGCGCAGGGCGGGCG < 41bp 1 0.447873012699489 1 0.227374047040939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752242 chr17:7752247 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_24092 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr17 7752247 7752247 1 + G A HNSC 7752243 + 7752223 7752263 41 ACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCGA ACCTCAGGCGGGCCCTGGGCCCGGAAGCGCAGGGCGGGCGA < 41bp 1 0.758147061528133 1 0.427837431430817 experiment 0.483705876943734 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752243 chr17:7752247 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_24093 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr8 37978466 37978466 1 + G T HNSC 37978454 + 37978434 37978474 41 TTTTTCCTTTCTGCAGTGACCCTTTGTTTTCTGCTCAGCGC TTTTTCCTTTCTGCAGTGACCCTTTGTTTTCTTCTCAGCGC < 41bp 1 0.0577898812060734 1 0.073207825422287 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASH2L ENSG00000129691 CDS Human protein_coding chr8:37978454 chr8:37978466 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_24094 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr8:37978451-37978480
64251 chr8 143816795 143816795 1 + G C HNSC 143816777 + 143816757 143816797 41 AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACGAG AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACCAG < 41bp 1 0.293676525778917 1 0.210601538419724 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THEM6 ENSG00000130193 CDS Human protein_coding chr8:143816777 chr8:143816795 nonsynonymous SNV 0.762 1 39 hm5C_associated_SNPs_24095 0 0 3 RPS3 POSTAR2 ENCODE chr8:143816750-143816797
64251 chr5 132427045 132427045 1 + T C HNSC 132427041 + 132427021 132427061 41 AAATGAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG AAATGAGGAGCCAATGGAAACAGACCAGAATGCAAAGGAGG < 41bp 1 0.235546567869352 1 0.51951402425766 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427041 chr5:132427045 synonymous SNV . 0 25 hm5C_associated_SNPs_24096 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427045 132427045 1 + T C HNSC 132427046 + 132427026 132427066 41 AGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGGAAGAG AGGAGCCAATGGAAACAGACCAGAATGCAAAGGAGGAAGAG < 41bp 1 0.669336830934926 1 0.28708815574646 experiment 0.661326338130148 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427046 chr5:132427045 synonymous SNV . 0 20 hm5C_associated_SNPs_24097 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427045 132427045 1 + T C HNSC 132427053 + 132427033 132427073 41 AATGGAAACAGATCAGAATGCAAAGGAGGAAGAGGTAATCT AATGGAAACAGACCAGAATGCAAAGGAGGAAGAGGTAATCT < 41bp 1 0.567740383945601 1 0.270610302686691 experiment 0.864519232108798 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427053 chr5:132427045 synonymous SNV . 0 13 hm5C_associated_SNPs_24098 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr10 6265929 6265929 1 + C T HNSC 6265930 + 6265910 6265950 41 TTCAATTTCAGAGGAGATGCCCTACCTGAAATGCCCTCTTC TTCAATTTCAGAGGAGATGTCCTACCTGAAATGCCCTCTTC < 41bp 1 0.0514302819302265 1 0.0706007480621338 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6265930 chr10:6265929 nonsynonymous SNV 0.995 4 20 hm5C_associated_SNPs_24099 0 0 2 BUD13 POSTAR2 ENCODE chr10:6265895-6265949
64251 chr19 19638864 19638864 1 + G T HNSC 19638852 + 19638832 19638872 41 TCCACACAACCCGCTGGGTGCCCCCCTTGATCGGGGAGCTG TCCACACAACCCGCTGGGTGCCCCCCTTGATCTGGGAGCTG < 41bp 1 0.1476775072338 1 0.0333397090435028 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638852 chr19:19638864 nonsynonymous SNV 0.000 3 33 hm5C_associated_SNPs_24105 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr22 51143509 51143509 1 + G T HNSC 51143513 + 51143493 51143533 41 GAAGCCAGAAGAGGACGGGGCTCGGCGCAGAGGTGAGGGGT GAAGCCAGAAGAGGACTGGGCTCGGCGCAGAGGTGAGGGGT < 41bp 1 0.373366256390312 1 0.646991193294525 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51143513 chr22:51143509 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_24110 0 0 6 BUD13 POSTAR2 ENCODE chr22:51143448-51143535
64251 chr1 2160689 2160689 1 + A T HNSC 2160685 + 2160665 2160705 41 ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATCCT ACGGCCGACCAGCTGGAGATCCTCTAAGTCATGGGCATCCT < 41bp 1 0.0663405792662492 1 0.0165040194988251 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2160685 chr1:2160689 stopgain 1.000 1 25 hm5C_associated_SNPs_24111 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:2160653-2160721
64251 chr19 990234 990234 1 + C A HNSC 990252 + 990232 990272 41 GGCCGACCCCTCCAGGATTCCGGCGCCCAGGCACGTCTGGT GGACGACCCCTCCAGGATTCCGGCGCCCAGGCACGTCTGGT < 41bp 1 0.607696863022415 1 0.855179309844971 experiment 0.784606273955171 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR18 ENSG00000065268 CDS Human protein_coding chr19:990252 chr19:990234 nonsynonymous SNV 0.723 0 3 hm5C_associated_SNPs_24112 0 0 2 SF3B4 POSTAR2 ENCODE chr19:990168-990237
64251 chr7 101837129 101837129 1 + A T HNSC 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGTAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA < 41bp 1 0.0235395802024589 1 0.420168817043304 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837129 stopgain 0.999 1 3 hm5C_associated_SNPs_24113 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:101837117-101837138
64251 chr7 101837129 101837129 1 + A T HNSC 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GTAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC < 41bp 1 0.088739750689234 1 0.396250307559967 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837129 stopgain 0.999 1 2 hm5C_associated_SNPs_24114 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:101837117-101837138
64251 chr12 124221737 124221737 1 + G T HNSC 124221725 + 124221705 124221745 41 TATCACATGCTGAACATGTGCAGCTTTGACGTGACCAACAA TATCACATGCTGAACATGTGCAGCTTTGACGTTACCAACAA < 41bp 1 0.707516349642441 1 0.133404105901718 experiment 0.584967300715117 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124221725 chr12:124221737 synonymous SNV . 0 33 hm5C_associated_SNPs_24116 0 0 2 UCHL5 POSTAR2 ENCODE chr12:124221691-124221747
64251 chr12 53776193 53776193 1 + C T HNSC 53776180 + 53776160 53776200 41 TGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGA TGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAATTTACAGA < 41bp 1 0.232838879200305 1 0.0288407802581787 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SP1 ENSG00000185591 CDS Human protein_coding chr12:53776180 chr12:53776193 synonymous SNV . 0 34 hm5C_associated_SNPs_24119 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:53776173-53776199
64251 chr5 140084081 140084081 1 + G A HNSC 140084084 + 140084064 140084104 41 GTGAAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAGA GTGAAGAAACGTTTTGAAGTCAACAAGAAGAAGATGGAAGA < 41bp 1 0.767865900302373 1 0.516069293022156 experiment 0.464268199395254 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084084 chr5:140084081 synonymous SNV . 0 18 hm5C_associated_SNPs_24120 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr5:140084034-140084089
64251 chr11 61503242 61503242 1 + A T HNSC 61503225 + 61503205 61503245 41 CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTGAGCG CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTGTGCG < 41bp 1 0.238778457177013 1 0.0560286939144135 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503225 chr11:61503242 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_24121 0 0 1 BUD13 POSTAR2 ENCODE chr11:61503232-61503284
64251 chr20 37144953 37144953 1 + C T HNSC 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC GCAAGAATTGAATCAGTATCCCTGCCTTAAACATTTGCCTC < 41bp 1 0.128202779232931 1 0.21642878651619 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144953 synonymous SNV . 0 35 hm5C_associated_SNPs_24122 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:37144935-37144960
64251 chr19 34859497 34859497 1 + G T HNSC 34859485 + 34859465 34859505 41 TATATCCTGACCGTAATCCCCAGGGTCGAGCCGTGCTGCAC TATATCCTGACCGTAATCCCCAGGGTCGAGCCTTGCTGCAC < 41bp 1 0.734954914474362 1 0.928230106830597 experiment 0.530090171051276 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34859485 chr19:34859497 nonsynonymous SNV 0.600 5 33 hm5C_associated_SNPs_24123 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34859480-34859500
64251 chr3 5215724 5215724 1 + G C HNSC 5215729 + 5215709 5215749 41 TGCTTGGAAACAAGAGAGATCTTCCTAATGCCTTGGATGAG TGCTTGGAAACAAGACAGATCTTCCTAATGCCTTGGATGAG < 41bp 1 0.0922037090342654 1 0.130713164806366 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARL8B ENSG00000134108 CDS Human protein_coding chr3:5215729 chr3:5215724 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_24124 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:5215719-5215730
64251 chr12 6976707 6976707 1 + C T HNSC 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACACTGACTTTCAGCGCCTCGGCT < 41bp 1 0.570171862702933 1 0.034674197435379 experiment 0.859656274594135 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976707 nonsynonymous SNV 0.811 0 26 hm5C_associated_SNPs_24125 0 0 1 DDX3X POSTAR2 ENCODE chr12:6976699-6976744
64251 chr9 137328333 137328333 1 + G A HNSC 137328316 + 137328296 137328336 41 AGACCTGTTCCCTGCAGGTTCGCTAAGCTCTTGCTCCGCCT AGACCTGTTCCCTGCAGGTTCGCTAAGCTCTTGCTCCACCT < 41bp 1 0.378904086208725 1 0.139027386903763 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137328316 chr9:137328333 nonsynonymous SNV 0.926 5 38 hm5C_associated_SNPs_24126 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:137328317-137328390
64251 chr1 41228713 41228713 1 + A T HNSC 41228706 + 41228686 41228726 41 ATCACTAACACAGGAGAGATCCAGCAGATCCCGGTGAGTCC ATCACTAACACAGGAGAGATCCAGCAGTTCCCGGTGAGTCC < 41bp 1 0.298879195164519 1 0.13390326499939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFYC ENSG00000066136 CDS Human protein_coding chr1:41228706 chr1:41228713 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_24127 0 0 4 BUD13 POSTAR2 ENCODE chr1:41228688-41228738
64251 chr11 62656109 62656109 1 + C T HNSC 62656090 + 62656070 62656110 41 CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAATG < 41bp 1 0.309473712767904 1 0.346596837043762 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656090 chr11:62656109 nonsynonymous SNV 0.010 2 40 hm5C_associated_SNPs_24133 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62656102-62656130
64251 chr11 62656109 62656109 1 + C T HNSC 62656092 + 62656072 62656112 41 GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACGCC GCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAATGCC < 41bp 1 0.333323532613618 1 0.0241070687770844 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656092 chr11:62656109 nonsynonymous SNV 0.010 2 38 hm5C_associated_SNPs_24134 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62656102-62656130
64251 chr19 47491269 47491269 1 + C T HNSC 47491265 + 47491245 47491285 41 GGACTGAGCACGGAAGGCATCTACCGGGTCAGCGGGAACAA GGACTGAGCACGGAAGGCATCTACTGGGTCAGCGGGAACAA < 41bp 1 0.436634348605364 1 0.305013000965118 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491265 chr19:47491269 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_24135 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 47491269 47491269 1 + C T HNSC 47491268 + 47491248 47491288 41 CTGAGCACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTC CTGAGCACGGAAGGCATCTACTGGGTCAGCGGGAACAAGTC < 41bp 1 0.747095988309233 1 0.56469589471817 experiment 0.505808023381533 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491268 chr19:47491269 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_24136 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 47491269 47491269 1 + C T HNSC 47491274 + 47491254 47491294 41 ACGGAAGGCATCTACCGGGTCAGCGGGAACAAGTCTGAGAT ACGGAAGGCATCTACTGGGTCAGCGGGAACAAGTCTGAGAT < 41bp 1 0.589623307780199 1 0.749020218849182 experiment 0.820753384439602 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491274 chr19:47491269 nonsynonymous SNV 0.994 4 16 hm5C_associated_SNPs_24137 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr19 47491269 47491269 1 + C T HNSC 47491283 + 47491263 47491303 41 ATCTACCGGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCT ATCTACTGGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCT < 41bp 1 0.341536179112816 1 0.249667048454285 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491283 chr19:47491269 nonsynonymous SNV 0.994 4 7 hm5C_associated_SNPs_24138 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr22 32881150 32881150 1 + C T HNSC 32881149 + 32881129 32881169 41 TCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGC TCCTCTCTGCGAGGGCAGCTCTGCTACTCTCACCTGTGTGC < 41bp 1 0.718440394758189 1 0.157951980829239 experiment 0.563119210483623 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881149 chr22:32881150 synonymous SNV . 0 22 hm5C_associated_SNPs_24139 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr10 51581333 51581333 1 + T C HNSC 51581313 + 51581293 51581333 41 CTGAAGATTCAACTGTCCTGCTCTTTGAAGCTGACACAATT CTGAAGATTCAACTGTCCTGCTCTTTGAAGCTGACACAATC < 41bp 1 0.199666517448734 1 0.0465018749237061 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCOA4 ENSG00000138293 CDS Human other chr10:51581313 chr10:51581333 synonymous SNV . 0 41 hm5C_associated_SNPs_24140 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:51581289-51581355
64251 chr15 64967739 64967739 1 + G A HNSC 64967735 + 64967715 64967755 41 GACTCACCATATTACCAAGGCTTTGAGAGTTACTATTCTCC GACTCACCATATTACCAAGGCTTTAAGAGTTACTATTCTCC < 41bp 1 0.0275234018614163 1 0.146707624197006 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64967735 chr15:64967739 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_24141 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:64967730-64967755
64251 chr2 101188229 101188229 1 + G A HNSC 101188212 + 101188192 101188232 41 TGGAAGGAGATATCAAGGCTCAGTTTATTGGTCCTCTGGTG TGGAAGGAGATATCAAGGCTCAGTTTATTGGTCCTCTAGTG < 41bp 1 0.409800577485289 1 0.380374938249588 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101188212 chr2:101188229 synonymous SNV . 0 38 hm5C_associated_SNPs_24143 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101188214-101188255
64251 chr20 47639640 47639640 1 + G T HNSC 47639658 + 47639638 47639678 41 TTGATACAGACCATTGACAACATTGTGTTCTACCCTGCGAC TTTATACAGACCATTGACAACATTGTGTTCTACCCTGCGAC < 41bp 1 0.118562497535919 1 0.104647129774094 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47639658 chr20:47639640 nonsynonymous SNV 0.998 4 3 hm5C_associated_SNPs_24144 0 0 1 NOL12 POSTAR2 ENCODE chr20:47639640-47639715
64251 chr22 24718349 24718349 1 + C T HNSC 24718365 + 24718345 24718385 41 TCCGCTCTCTTCTAGATGAGCATCACATTTCTTATGTCATA TCCGTTCTCTTCTAGATGAGCATCACATTTCTTATGTCATA < 41bp 1 0.0976372583166977 1 0.041659414768219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPECC1L ENSG00000100014;ENSG00000258555 CDS Human other chr22:24718365 chr22:24718349 synonymous SNV . 0 5 hm5C_associated_SNPs_24145 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:24718313-24718349
64251 chr5 176524631 176524631 1 + C T HNSC 176524624 + 176524604 176524644 41 ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGC ATTCTGTCTTCAGCCACGACCCCCTGCTATTGGGATCCAGC < 41bp 1 0.13633856370058 1 0.0476216077804565 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524624 chr5:176524631 nonsynonymous SNV 0.243 1 28 hm5C_associated_SNPs_24146 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr5 176524631 176524631 1 + C T HNSC 176524627 + 176524607 176524647 41 CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC CTGTCTTCAGCCACGACCCCCTGCTATTGGGATCCAGCTCC < 41bp 1 0.397475973419643 1 0.0631245374679565 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524627 chr5:176524631 nonsynonymous SNV 0.243 1 25 hm5C_associated_SNPs_24147 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr22 42033722 42033722 1 + G C HNSC 42033729 + 42033709 42033749 41 CAGGGTTCACTTTGAGGAATCCAGCAAGCTAGAAGACCTGT CAGGGTTCACTTTCAGGAATCCAGCAAGCTAGAAGACCTGT < 41bp 1 0.194433512904386 1 0.162341594696045 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42033729 chr22:42033722 nonsynonymous SNV 0.989 1 14 hm5C_associated_SNPs_24148 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42033720-42033740
64251 chr17 7483866 7483866 1 + C T HNSC 7483883 + 7483863 7483903 41 TCTCATTCCCCTATGGACACCTCAGCTTTGGATTCATGCAG TCTTATTCCCCTATGGACACCTCAGCTTTGGATTCATGCAG < 41bp 1 0.406035231476967 1 0.139985173940659 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CD68 ENSG00000129226 CDS Human protein_coding chr17:7483883 chr17:7483866 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_24149 0 0 1 IGF2BP2 POSTAR2 ENCODE chr17:7483822-7483866
64251 chr20 398533 398533 1 + C G HNSC 398525 + 398505 398545 41 CTGTCAGCCCGCAACACCTCCCTCAACCCTCAGGAGCTGCA CTGTCAGCCCGCAACACCTCCCTCAACCGTCAGGAGCTGCA < 41bp 1 0.121486574446236 1 0.121772825717926 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBCK1 ENSG00000125826 CDS Human protein_coding chr20:398525 chr20:398533 nonsynonymous SNV 0.997 0 29 hm5C_associated_SNPs_24150 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:398499-398548
64251 chr14 105181075 105181075 1 + C A HNSC 105181057 + 105181037 105181077 41 GCCCCAGAGTCCGCACTGGACACATCCCTGGACAAGTCCTT GCCCCAGAGTCCGCACTGGACACATCCCTGGACAAGTCATT < 41bp 1 0.161988558294978 1 0.0135237574577332 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105181057 chr14:105181075 synonymous SNV . 0 39 hm5C_associated_SNPs_24151 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:105181047-105181085
64251 chr16 88601287 88601287 1 + G C HNSC 88601291 + 88601271 88601311 41 CCCAACGGCAACCACCGGTACTGCCGTCTTTGCAACATCAA CCCAACGGCAACCACCCGTACTGCCGTCTTTGCAACATCAA < 41bp 1 0.174956166965023 1 0.128491014242172 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFPM1 ENSG00000179588 CDS Human protein_coding chr16:88601291 chr16:88601287 nonsynonymous SNV 0.568 3 17 hm5C_associated_SNPs_24153 0 0 1 DDX6 POSTAR2 ENCODE chr16:88601207-88601295
64251 chrX 70776891 70776891 1 + C T HNSC 70776893 + 70776873 70776913 41 GAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCT GAGCCTTGCAGTGTTATATGCGTGCCATCCAAATTAATCCT < 41bp 1 0.211012405390125 1 0.056756466627121 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70776893 chrX:70776891 nonsynonymous SNV 0.989 3 19 hm5C_associated_SNPs_24154 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70776805-70776893
64251 chr10 105174888 105174888 1 + G T HNSC 105174899 + 105174879 105174919 41 TACCACATCGGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT TACCACATCTGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT < 41bp 1 0.464265265283054 1 0.786069571971893 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105174899 chr10:105174888 nonsynonymous SNV 0.436 4 10 hm5C_associated_SNPs_24156 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:105174863-105174888
64251 chr13 48832958 48832958 1 + A G HNSC 48832941 + 48832921 48832961 41 TTCTGAATGTAGGCTGGAACCTATTTGCCTCAGTCCTATCT TTCTGAATGTAGGCTGGAACCTATTTGCCTCAGTCCTGTCT < 41bp 1 0.479433371405247 1 0.0283579230308533 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITM2B ENSG00000136156 CDS Human protein_coding chr13:48832941 chr13:48832958 nonsynonymous SNV 0.977 3 38 hm5C_associated_SNPs_24157 0 0 14 CPSF4 POSTAR2 GSE37401,GSM917667 chr13:48832937-48832962
64251 chr16 27642470 27642470 1 + G A HNSC 27642481 + 27642461 27642501 41 TCCAGCGCCGAGGATGGCACCAGGTCTGGAGACTGTGGCCC TCCAGCGCCAAGGATGGCACCAGGTCTGGAGACTGTGGCCC < 41bp 1 0.540172726989613 1 0.413510024547577 experiment 0.919654546020774 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27642481 chr16:27642470 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_24158 0 0 2 BUD13 POSTAR2 ENCODE chr16:27642402-27642489
64251 chr16 53338091 53338091 1 + C G HNSC 53338084 + 53338064 53338104 41 GTGAAAACCTTAAAGAGGAGCCTCAGTCTTCTGAAGAAGAA GTGAAAACCTTAAAGAGGAGCCTCAGTGTTCTGAAGAAGAA < 41bp 1 0.0418026157497349 1 0.0845789015293121 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53338084 chr16:53338091 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_24159 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:53338059-53338094
64251 chr5 140731304 140731304 1 + G A HNSC 140731316 + 140731296 140731336 41 GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG GTGACCTGAAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG < 41bp 1 0.185999255776704 1 0.0977763235569 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731316 chr5:140731304 nonsynonymous SNV 0.189 0 9 hm5C_associated_SNPs_24160 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr17 66526546 66526546 1 + C T HNSC 66526558 + 66526538 66526578 41 TCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA TCCTCAAATGAAACATCCAGCAGTACAACAGTTTTGTGTCA < 41bp 1 0.512513127146331 1 0.854114294052124 experiment 0.974973745707337 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66526558 chr17:66526546 stopgain 0.998 1 9 hm5C_associated_SNPs_24161 1 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:66526482-66526571
64251 chr22 18979485 18979485 1 + A G HNSC 18979466 + 18979446 18979486 41 AGATGGAGAAGCGAACCAAGCCTGTCTGTGTGTTCTGGAAC AGATGGAGAAGCGAACCAAGCCTGTCTGTGTGTTCTGGAGC < 41bp 1 0.111858105173061 1 0.0705478191375732 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979466 chr22:18979485 . . 0 40 hm5C_associated_SNPs_24162 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:18979469-18979504
64251 chr3 170078459 170078459 1 + G C HNSC 170078471 + 170078451 170078491 41 ATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT ATTCCCAACAAAGCATGTCGCCTACTGTATTTCTGCCTCTT < 41bp 1 0.100732584696259 1 0.0294071733951569 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170078471 chr3:170078459 nonsynonymous SNV 0.994 5 9 hm5C_associated_SNPs_24163 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:170078413-170078459
64251 chrX 73046762 73046762 1 - A T HNSC 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGACTCAAGGCTTGAGTTAGAAGTCTTAAGA < 41bp 1 0.541680701842215 1 0.167009323835373 experiment 0.916638596315569 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046762 . . 0 13 hm5C_associated_SNPs_24164 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046762 73046762 1 - A T HNSC 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGACTC < 41bp 1 0.362499516791005 1 0.474647849798203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046762 . . 0 38 hm5C_associated_SNPs_24165 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr14 53175510 53175510 1 + A T HNSC 53175498 + 53175478 53175518 41 CTAGTCATTGTTAAAGCTACCAATGGACCAAGATATGTTGT CTAGTCATTGTTAAAGCTACCAATGGACCAAGTTATGTTGT < 41bp 1 0.185572770814402 1 0.52203094959259 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53175498 chr14:53175510 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_24166 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:53175498-53175541
64251 chr1 150445676 150445676 1 + C T HNSC 150445667 + 150445647 150445687 41 GCCGGAGTGGTATAATCTTACGGAGTCCCCGGCCAGACTTT GCCGGAGTGGTATAATCTTACGGAGTCCCTGGCCAGACTTT < 41bp 1 0.621425187022096 1 0.910336494445801 experiment 0.757149625955807 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445667 chr1:150445676 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_24167 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150445656-150445682
64251 chr10 98743187 98743187 1 + T A HNSC 98743202 + 98743182 98743222 41 GAGGCTGTGAATGAGGTAGACAACGAAAACACCCAGCAGAA GAGGCAGTGAATGAGGTAGACAACGAAAACACCCAGCAGAA < 41bp 1 0.738094135226761 1 0.527466297149658 experiment 0.523811729546477 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LCOR ENSG00000155640 CDS Human other chr10:98743202 chr10:98743187 synonymous SNV . 0 6 hm5C_associated_SNPs_24168 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:98743176-98743196
64251 chr11 46387882 46387882 1 + G A HNSC 46387881 + 46387861 46387901 41 GGGCAGCAGCGGCCCAGCAGCGTGGGGCTGCCCACAGGCAA GGGCAGCAGCGGCCCAGCAGCATGGGGCTGCCCACAGGCAA < 41bp 1 0.698497402090656 1 0.696611225605011 experiment 0.603005195818688 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46387881 chr11:46387882 nonsynonymous SNV 0.250 0 22 hm5C_associated_SNPs_24169 0 0 1 NONO POSTAR2 ENCODE chr11:46387828-46387882
64251 chr1 117631445 117631445 1 + G A HNSC 117631430 + 117631410 117631450 41 GTGATTCTTCCAGGGCACCTCAACACCTTTGCTTCGAATAG GTGATTCTTCCAGGGCACCTCAACACCTTTGCTTCAAATAG < 41bp 1 0.542281491538116 1 0.3409583568573 experiment 0.915437016923768 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117631430 chr1:117631445 nonsynonymous SNV 0.978 1 36 hm5C_associated_SNPs_24170 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117631429-117631455
64251 chr12 98941400 98941400 1 + C T HNSC 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGGCCGGCCATTAGAATTCAGTGATTTCAGGATGGAGGA < 41bp 1 0.713351147307948 1 0.203604996204376 experiment 0.573297705384104 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941400 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_24171 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:98941372-98941431
64251 chr6 41557787 41557787 1 + G A HNSC 41557781 + 41557761 41557801 41 TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCCGCAGC TTCCCAGATGGTCTCGTGCACCCCCCAACCTCGGCCGCAGC < 41bp 1 0.118734376192792 1 0.0396743416786194 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXP4 ENSG00000137166 CDS Human protein_coding chr6:41557781 chr6:41557787 synonymous SNV . 0 27 hm5C_associated_SNPs_24172 0 0 1 DDX24 POSTAR2 ENCODE chr6:41557752-41557874
64251 chr12 54394191 54394191 1 + G A HNSC 54394180 + 54394160 54394200 41 GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTA GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCATCCGTGGTA < 41bp 1 0.176760366227172 1 0.0443659126758575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394180 chr12:54394191 synonymous SNV . 0 32 hm5C_associated_SNPs_24173 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54394180-54394220
64251 chr11 73068155 73068155 1 + C T HNSC 73068165 + 73068145 73068185 41 AAGTCAGGCTCCCTGCGGCGCAGCTCCATGAGCCTGTGAGT AAGTCAGGCTTCCTGCGGCGCAGCTCCATGAGCCTGTGAGT < 41bp 1 0.114202268048556 1 0.0458849370479584 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73068165 chr11:73068155 nonsynonymous SNV 0.991 4 11 hm5C_associated_SNPs_24174 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73068081-73068182
64251 chr11 67818101 67818101 1 + C A HNSC 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACTCTAAGCCTTCCTGCACGCCCTGCGGC < 41bp 1 0.05531868723955 1 0.336641371250153 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818101 stopgain 0.986 1 18 hm5C_associated_SNPs_24175 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818101 67818101 1 + C A HNSC 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACTCTAAGCCTTCCTGCACGCCCTGCGGCT < 41bp 1 0.152148252500449 1 0.398286253213882 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818101 stopgain 0.986 1 17 hm5C_associated_SNPs_24176 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr10 106014946 106014946 1 + G A HNSC 106014932 + 106014912 106014952 41 CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCGGAGGGC CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCAGAGGGC < 41bp 1 0.755126424401473 1 0.880974471569061 experiment 0.489747151197054 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106014932 chr10:106014946 synonymous SNV . 0 35 hm5C_associated_SNPs_24177 0 0 18 FUS POSTAR2 DRA001158,DRS012384 chr10:106014940-106014997
64251 chr1 78470899 78470899 1 + G C HNSC 78470892 + 78470872 78470912 41 ACAAGCCCTCAAATTTCATCCGGACAAGAACAAATCTCCTC ACAAGCCCTCAAATTTCATCCGGACAACAACAAATCTCCTC < 41bp 1 0.386576371062329 1 0.397860169410706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78470892 chr1:78470899 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_24178 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:78470887-78470908
64251 chr1 38484941 38484941 1 + C T HNSC 38484930 + 38484910 38484950 41 TGTCTTGAATTTTAGTTGAACAGTTTGATGTCGCAACTCAC TGTCTTGAATTTTAGTTGAACAGTTTGATGTTGCAACTCAC < 41bp 1 0.24076123437915 1 0.0480068027973175 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP11 ENSG00000183520 CDS Human protein_coding chr1:38484930 chr1:38484941 synonymous SNV . 0 32 hm5C_associated_SNPs_24179 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:38484826-38484982
64251 chr1 33957252 33957252 1 + C T HNSC 33957260 + 33957240 33957280 41 ATGTTGAGTCTACCCAGGGGCCCAGGATTGCAGGGGCCCCA ATGTTGAGTCTATCCAGGGGCCCAGGATTGCAGGGGCCCCA < 41bp 1 0.24189688351206 1 0.0614194571971893 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33957260 chr1:33957252 nonsynonymous SNV 0.004 0 13 hm5C_associated_SNPs_24180 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:33957228-33957254
64251 chr1 33957252 33957252 1 + C T HNSC 33957261 + 33957241 33957281 41 TGTTGAGTCTACCCAGGGGCCCAGGATTGCAGGGGCCCCAG TGTTGAGTCTATCCAGGGGCCCAGGATTGCAGGGGCCCCAG < 41bp 1 0.552383645212433 1 0.449267566204071 experiment 0.895232709575134 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33957261 chr1:33957252 nonsynonymous SNV 0.004 0 12 hm5C_associated_SNPs_24181 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:33957228-33957254
64251 chr19 58757773 58757773 1 + G A HNSC 58757778 + 58757758 58757798 41 TGACACTGGAGACCTGGGAGCATATTGTCTCCCTGGGTAAG TGACACTGGAGACCTAGGAGCATATTGTCTCCCTGGGTAAG < 41bp 1 0.210215588388385 1 0.0670055747032166 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58757778 chr19:58757773 stopgain 0.403 0 16 hm5C_associated_SNPs_24182 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58757677-58757776
64251 chr8 145151588 145151588 1 + C T HNSC 145151587 + 145151567 145151607 41 TCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGCCATG TCTACTTCAACCCCTACTTTCTTGGCCAGGCCATTGCCATG < 41bp 1 0.548706069677348 1 0.212844759225845 experiment 0.902587860645305 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151587 chr8:145151588 nonsynonymous SNV 0.980 2 22 hm5C_associated_SNPs_24183 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145151560-145151600
64251 chr18 48581281 48581281 1 + C G HNSC 48581284 + 48581264 48581304 41 GCATCGACAGAGACATACAGCACCCCAGCTCTGTTAGCCCC GCATCGACAGAGACATAGAGCACCCCAGCTCTGTTAGCCCC < 41bp 1 0.351275541932043 1 0.220367640256882 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48581284 chr18:48581281 stopgain 1.000 1 18 hm5C_associated_SNPs_24185 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:48581246-48581296
64251 chr2 127453707 127453707 1 + T G HNSC 127453726 + 127453706 127453746 41 GTACTTTATTTGAGGGACAACAGACTTCACTTCCCTGAATG GGACTTTATTTGAGGGACAACAGACTTCACTTCCCTGAATG < 41bp 1 0.441232948236004 1 0.653250396251678 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GYPC ENSG00000136732 CDS Human protein_coding chr2:127453726 chr2:127453707 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_24187 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:127453700-127453740
64251 chr4 123748456 123748456 1 + A T HNSC 123748458 + 123748438 123748478 41 GGGGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGA GGGGGCTTCTTCCTGCGCTTCCACCCCGACGGCCGAGTTGA < 41bp 1 0.132607948021073 1 0.0347273945808411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748458 chr4:123748456 nonsynonymous SNV 0.989 4 19 hm5C_associated_SNPs_24192 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr4 123748456 123748456 1 + A T HNSC 123748462 + 123748442 123748482 41 GCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGG GCTTCTTCCTGCGCTTCCACCCCGACGGCCGAGTTGACGGG < 41bp 1 0.750596066867925 1 0.211326748132706 experiment 0.49880786626415 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748462 chr4:123748456 nonsynonymous SNV 0.989 4 15 hm5C_associated_SNPs_24193 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr12 120876216 120876216 1 + G T HNSC 120876203 + 120876183 120876223 41 TCGCATGTGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCG TCGCATGTGGAAGACTCTCACCTTCTTCGTCGCTCTCCCCG < 41bp 1 0.0965255873559682 1 0.0591717064380646 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX6A1 ENSG00000111775;ENSG00000111780 CDS Human other chr12:120876203 chr12:120876216 synonymous SNV . 0 34 hm5C_associated_SNPs_24194 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:120876179-120876243
64251 chr12 120876216 120876216 1 + G T HNSC 120876210 + 120876190 120876230 41 TGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCGGGGTGGC TGGAAGACTCTCACCTTCTTCGTCGCTCTCCCCGGGGTGGC < 41bp 1 0.553877750007772 1 0.30914232134819 experiment 0.892244499984457 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX6A1 ENSG00000111775;ENSG00000111780 CDS Human other chr12:120876210 chr12:120876216 synonymous SNV . 0 27 hm5C_associated_SNPs_24195 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:120876179-120876243
64251 chr12 113730845 113730845 1 + G T HNSC 113730854 + 113730834 113730874 41 GTCACCAGGCTGCTGGAGACCCTCTCCCAGATGGAGAGATA GTCACCAGGCTTCTGGAGACCCTCTCCCAGATGGAGAGATA < 41bp 1 0.0689098192760458 1 0.0435196161270142 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113730854 chr12:113730845 synonymous SNV . 0 12 hm5C_associated_SNPs_24197 0 0 4 BUD13 POSTAR2 ENCODE chr12:113730797-113730856
64251 chr1 109642857 109642857 1 + C T HNSC 109642871 + 109642851 109642891 41 TGTGTGCGGAGCTGTGGCGTCGCGTGTGAGGCGCGTGCAGG TGTGTGTGGAGCTGTGGCGTCGCGTGTGAGGCGCGTGCAGG < 41bp 1 0.733058249933968 1 0.685044765472412 experiment 0.533883500132065 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642871 chr1:109642857 . . 0 7 hm5C_associated_SNPs_24198 0 0 59 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr16 29848052 29848052 1 + C T HNSC 29848064 + 29848044 29848084 41 CAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC CAGCCCTGTACCTCCGGGCTCGGCGGAACTTCCGGGACTTC < 41bp 1 0.705677973989123 1 0.758337795734406 experiment 0.588644052021755 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29848064 chr16:29848052 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_24199 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chr13 99098961 99098961 1 + G A HNSC 99098975 + 99098955 99098995 41 CTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGA CTACTCACTCACCATCCCCTCTGAGTCCGAGAACATCCAGA < 41bp 1 0.239125807690343 1 0.0542246699333191 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098975 chr13:99098961 synonymous SNV . 0 7 hm5C_associated_SNPs_24200 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr13 99098961 99098961 1 + G A HNSC 99098981 + 99098961 99099001 41 GCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACT ACTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACT < 41bp 1 0.144439372574497 1 0.625325441360474 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098981 chr13:99098961 synonymous SNV . 0 1 hm5C_associated_SNPs_24201 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr19 45573294 45573294 1 + G A HNSC 45573290 + 45573270 45573310 41 GCCTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAGAGAGAA GCCTTCGCAGGGAGCGGGAACGCCAAGAGAAGGAGAGAGAA < 41bp 1 0.789993928537463 1 0.719563245773315 experiment 0.420012142925074 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLASRP ENSG00000104859 CDS Human protein_coding chr19:45573290 chr19:45573294 nonsynonymous SNV 0.991 3 25 hm5C_associated_SNPs_24202 0 0 17 BUD13 POSTAR2 ENCODE chr19:45573271-45573363
64251 chr19 45573294 45573294 1 + G A HNSC 45573292 + 45573272 45573312 41 CTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGA CTTCGCAGGGAGCGGGAACGCCAAGAGAAGGAGAGAGAAGA < 41bp 1 0.403198816891628 1 0.732563436031342 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLASRP ENSG00000104859 CDS Human protein_coding chr19:45573292 chr19:45573294 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_24203 0 0 17 BUD13 POSTAR2 ENCODE chr19:45573271-45573363
64251 chr11 65273274 65273274 1 + C G HNSC 65273280 + 65273260 65273300 41 GTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACA GTGACTAAAACCAAGTTAAACCAGTAAGTGGAGAAATAACA < 41bp 1 0.531072917419446 1 0.125867784023285 experiment 0.937854165161108 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273280 chr11:65273274 . . 0 15 hm5C_associated_SNPs_24204 0 0 101 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr19 50720993 50720993 1 + C A HNSC 50721013 + 50720993 50721033 41 CAGTGACCGAGGGGGCCTATCGGAGCATGCTGCAGGGTGAG AAGTGACCGAGGGGGCCTATCGGAGCATGCTGCAGGGTGAG < 41bp 1 0.710956977639382 1 0.904205918312073 experiment 0.578086044721236 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50721013 chr19:50720993 nonsynonymous SNV 0.957 4 1 hm5C_associated_SNPs_24205 0 0 1 PRPF8 POSTAR2 ENCODE chr19:50720962-50721069
64251 chr3 179104304 179104304 1 + G A HNSC 179104323 + 179104303 179104343 41 GGACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGTTT GAACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGTTT < 41bp 1 0.338165394772346 1 0.340585052967072 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MFN1 ENSG00000171109 CDS Human protein_coding chr3:179104323 chr3:179104304 stopgain 0.973 1 2 hm5C_associated_SNPs_24206 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:179104287-179104315
64251 chr3 179104303 179104303 1 + G A HNSC 179104323 + 179104303 179104343 41 GGACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGTTT AGACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGTTT < 41bp 1 0.350331901680518 1 0.27801924943924 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MFN1 ENSG00000171109 CDS Human protein_coding chr3:179104323 chr3:179104303 stopgain 0.972 1 1 hm5C_associated_SNPs_24207 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:179104287-179104315
64251 chr5 175933836 175933836 1 + C T HNSC 175933837 + 175933817 175933857 41 CAGATTGAAGCCAATTTTCCCAGGCGAGTGCTGCCCTGCAT CAGATTGAAGCCAATTTTCTCAGGCGAGTGCTGCCCTGCAT < 41bp 1 0.762683004739615 1 0.933677196502686 experiment 0.474633990520771 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933837 chr5:175933836 nonsynonymous SNV 0.997 4 20 hm5C_associated_SNPs_24208 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr5 175933836 175933836 1 + C T HNSC 175933855 + 175933835 175933875 41 CCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC CTCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC < 41bp 1 0.105753925011115 1 0.110507071018219 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933855 chr5:175933836 nonsynonymous SNV 0.997 4 2 hm5C_associated_SNPs_24209 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr12 19427805 19427805 1 + G A HNSC 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CAGATCTTAGAGGTGGAAATCGCCCCAATACAAGGCCCTTA < 41bp 1 0.40855091131739 1 0.307518184185028 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427805 nonsynonymous SNV 0.619 1 33 hm5C_associated_SNPs_24210 0 0 2 BUD13 POSTAR2 ENCODE chr12:19427768-19427916
64251 chr17 16342695 16342695 1 + C T HNSC 16342711 + 16342691 16342731 41 CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTA CGGCTCACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTA < 41bp 1 0.359319145714849 1 0.198888063430786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342711 chr17:16342695 . . 0 5 hm5C_associated_SNPs_24212 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:16342638-16342722
64251 chr16 30941539 30941539 1 + C T HNSC 30941537 + 30941517 30941557 41 TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCGGG TCTTCCTCCTCGGACTCAGACTTCGACTCCGACTCTTCGGG < 41bp 1 0.188126685042544 1 0.564145922660828 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941537 chr16:30941539 nonsynonymous SNV 0.408 3 23 hm5C_associated_SNPs_24213 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30941518-30941558
64251 chr7 98501139 98501139 1 + C T HNSC 98501140 + 98501120 98501160 41 TCACCACAGAGCTGAGAAACCGTACGTCCAGCCTGTCTTGT TCACCACAGAGCTGAGAAATCGTACGTCCAGCCTGTCTTGT < 41bp 1 0.132998924741235 1 0.114034652709961 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98501140 chr7:98501139 synonymous SNV . 0 20 hm5C_associated_SNPs_24214 0 0 1 PRPF8 POSTAR2 ENCODE chr7:98501137-98501183
64251 chr19 50099247 50099247 1 + C T HNSC 50099242 + 50099222 50099262 41 CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCGG CATGGGGGTGGCTGGGGACCCAGCTTCCTGGGAGGCGGCGG < 41bp 1 0.680611848866937 1 0.666584849357605 experiment 0.638776302266125 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099242 chr19:50099247 nonsynonymous SNV 0.923 1 26 hm5C_associated_SNPs_24218 0 0 3 BUD13 POSTAR2 ENCODE chr19:50099216-50099280
64251 chr12 56622941 56622941 1 + C T HNSC 56622945 + 56622925 56622965 41 TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG TGCAGGCCCGCCTGGCTCTTCCAGCAACCCTGTTAGTAACG < 41bp 1 0.286228878153772 1 0.366401612758636 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622945 chr12:56622941 nonsynonymous SNV 0.998 0 17 hm5C_associated_SNPs_24220 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr12:56622905-56622971
64251 chr12 56622940 56622940 1 + C T HNSC 56622945 + 56622925 56622965 41 TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG TGCAGGCCCGCCTGGTCCTTCCAGCAACCCTGTTAGTAACG < 41bp 1 0.252991415068349 1 0.442690014839172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622945 chr12:56622940 synonymous SNV . 0 16 hm5C_associated_SNPs_24221 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr12:56622905-56622971
64251 chr17 685749 685749 1 + C T HNSC 685745 + 685725 685765 41 GCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAA GCCCAGTGAAAGTGGTGTTTCCTTTCGGAGAGGTGGTGGAA < 41bp 1 0.0763168639418917 1 0.0709037780761719 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRM3 ENSG00000171861 CDS Human protein_coding chr17:685745 chr17:685749 nonsynonymous SNV 0.806 0 25 hm5C_associated_SNPs_24222 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:685748-685749
64251 chr17 79990328 79990328 1 + C T HNSC 79990314 + 79990294 79990334 41 TACACGACCAACGCCTTCCCCGGAGAGTACATCCCCACCGT TACACGACCAACGCCTTCCCCGGAGAGTACATCCTCACCGT < 41bp 1 0.73183091949279 1 0.791126549243927 experiment 0.536338161014419 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990314 chr17:79990328 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_24223 0 0 2 METAP2 POSTAR2 ENCODE chr17:79990301-79990329
64251 chr12 57919369 57919369 1 + G A HNSC 57919351 + 57919331 57919371 41 CCTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGG CCTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGAGG < 41bp 1 0.219431129116785 1 0.390781044960022 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919351 chr12:57919369 synonymous SNV . 0 39 hm5C_associated_SNPs_24224 0 0 7 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919369 57919369 1 + G A HNSC 57919352 + 57919332 57919372 41 CTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGC CTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGAGGC < 41bp 1 0.408407139835623 1 0.353926509618759 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919352 chr12:57919369 synonymous SNV . 0 38 hm5C_associated_SNPs_24225 0 0 7 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919369 57919369 1 + G A HNSC 57919353 + 57919333 57919373 41 TTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCA TTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGAGGCA < 41bp 1 0.294083265908531 1 0.140579044818878 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919353 chr12:57919369 synonymous SNV . 0 37 hm5C_associated_SNPs_24226 0 0 7 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919369 57919369 1 + G A HNSC 57919354 + 57919334 57919374 41 TCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAA TCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGAGGCAA < 41bp 1 0.0951738965003436 1 0.063003808259964 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919354 chr12:57919369 synonymous SNV . 0 36 hm5C_associated_SNPs_24227 0 0 7 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919369 57919369 1 + G A HNSC 57919355 + 57919335 57919375 41 CTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAAT CTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGAGGCAAT < 41bp 1 0.0479262571985154 1 0.179141730070114 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919355 chr12:57919369 synonymous SNV . 0 35 hm5C_associated_SNPs_24228 0 0 7 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr20 44430653 44430653 1 + C T HNSC 44430647 + 44430627 44430667 41 TTTTGTGGCAGAGGAAAGGACGGCCTCCTGGACACATCCTG TTTTGTGGCAGAGGAAAGGACGGCCTTCTGGACACATCCTG < 41bp 1 0.556190540608396 1 0.333138793706894 experiment 0.887618918783208 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44430647 chr20:44430653 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_24229 0 0 3 DDX6 POSTAR2 ENCODE chr20:44430638-44430682
64251 chr5 149772279 149772279 1 + C T HNSC 149772283 + 149772263 149772303 41 TCCAGTAGGTCCCACCCCCTCCAGGACAGAGACCCTGGTGG TCCAGTAGGTCCCACCTCCTCCAGGACAGAGACCCTGGTGG < 41bp 1 0.552789659881002 1 0.878966927528381 experiment 0.894420680237996 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149772283 chr5:149772279 nonsynonymous SNV 0.005 1 17 hm5C_associated_SNPs_24230 0 0 4 SUB1 POSTAR2 ENCODE chr5:149772241-149772283
64251 chr12 57919368 57919368 1 + G A HNSC 57919351 + 57919331 57919371 41 CCTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGG CCTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAAGGG < 41bp 1 0.23563190258303 1 0.396110475063324 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919351 chr12:57919368 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_24231 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919368 57919368 1 + G A HNSC 57919352 + 57919332 57919372 41 CTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGC CTTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAAGGGC < 41bp 1 0.38268973981691 1 0.347110450267792 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919352 chr12:57919368 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_24232 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919368 57919368 1 + G A HNSC 57919353 + 57919333 57919373 41 TTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCA TTCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAAGGGCA < 41bp 1 0.302818309576746 1 0.159691005945206 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919353 chr12:57919368 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_24233 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919368 57919368 1 + G A HNSC 57919354 + 57919334 57919374 41 TCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAA TCTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAAGGGCAA < 41bp 1 0.0898207987658182 1 0.0803572535514832 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919354 chr12:57919368 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_24234 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr12 57919368 57919368 1 + G A HNSC 57919355 + 57919335 57919375 41 CTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAGGGGCAAT CTGGGGGCAGTAGCAGCCCCCGTTTCCTCCCAAAGGGCAAT < 41bp 1 0.047805039767012 1 0.211701273918152 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919355 chr12:57919368 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_24235 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr2 228398379 228398379 1 + C T HNSC 228398373 + 228398353 228398393 41 TTCCCAGAGTCATCAAACAGCATCAGCTGTTAGTAAAGTTT TTCCCAGAGTCATCAAACAGCATCAGTTGTTAGTAAAGTTT < 41bp 1 0.423860940948609 1 0.0725222229957581 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228398373 chr2:228398379 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_24236 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:228398333-228398448
64251 chr6 31601198 31601198 1 + C T HNSC 31601218 + 31601198 31601238 41 CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAG TCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAG < 41bp 1 0.308882609091285 1 0.131213843822479 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31601218 chr6:31601198 synonymous SNV . 0 1 hm5C_associated_SNPs_24244 0 0 10 FBL POSTAR2 GSE43666,GSM1067865 chr6:31601164-31601200
64251 chr19 13063836 13063836 1 + C A HNSC 13063834 + 13063814 13063854 41 AGAACTTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGAT AGAACTTGGCTGCCAACTTCCTACTGAGTCAGAACTTTGAT < 41bp 1 0.403503066011078 1 0.4743871986866 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23A ENSG00000179262 CDS Human protein_coding chr19:13063834 chr19:13063836 synonymous SNV . 0 23 hm5C_associated_SNPs_24245 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr19:13063782-13063926
64251 chr3 126751349 126751349 1 + G T HNSC 126751338 + 126751318 126751358 41 TCGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACCTC TCGGTGGTGGCCCAGACCTTCATGGACTCCTTCTCCACCTC < 41bp 1 0.364976268826355 1 0.122744351625443 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751338 chr3:126751349 nonsynonymous SNV 0.943 4 32 hm5C_associated_SNPs_24246 0 0 1 DDX24 POSTAR2 ENCODE chr3:126751296-126751382
64251 chr8 73921394 73921394 1 + C T HNSC 73921391 + 73921371 73921411 41 CTCTCTCTTTGCCGAGCTTTCCGCGACGGCCGCTCCGAGGA CTCTCTCTTTGCCGAGCTTTCCGTGACGGCCGCTCCGAGGA < 41bp 1 0.690878630619362 1 0.54640257358551 experiment 0.618242738761275 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921391 chr8:73921394 synonymous SNV . 0 24 hm5C_associated_SNPs_24247 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:73921352-73921416
64251 chr8 73921394 73921394 1 + C T HNSC 73921405 + 73921385 73921425 41 AGCTTTCCGCGACGGCCGCTCCGAGGACTTCCGCAGGACCC AGCTTTCCGTGACGGCCGCTCCGAGGACTTCCGCAGGACCC < 41bp 1 0.702342662673738 1 0.684804797172546 experiment 0.595314674652525 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921405 chr8:73921394 synonymous SNV . 0 10 hm5C_associated_SNPs_24248 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:73921352-73921416
64251 chr3 47030591 47030591 1 + G C HNSC 47030605 + 47030585 47030625 41 AACATAGAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGT AACATACAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGT < 41bp 1 0.0852261263984471 1 0.594394862651825 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030605 chr3:47030591 nonsynonymous SNV 0.799 0 7 hm5C_associated_SNPs_24249 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr3 47030591 47030591 1 + G C HNSC 47030606 + 47030586 47030626 41 ACATAGAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGTG ACATACAGGCAGGCCGGGGCCAAGTGCTAGTGCCCCGAGTG < 41bp 1 0.387024600294236 1 0.666030406951904 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47030606 chr3:47030591 nonsynonymous SNV 0.799 0 6 hm5C_associated_SNPs_24250 0 0 11 BUD13 POSTAR2 ENCODE chr3:47030562-47030607
64251 chr11 63743743 63743743 1 + C T HNSC 63743738 + 63743718 63743758 41 TCCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCT TCCTGCTTCGTGACCTTCCTCCTGCTAGCGGGCTGGATCCT < 41bp 1 0.226917863975105 1 0.733794689178467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743738 chr11:63743743 nonsynonymous SNV 0.529 2 26 hm5C_associated_SNPs_24251 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr11 63743743 63743743 1 + C T HNSC 63743739 + 63743719 63743759 41 CCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG CCTGCTTCGTGACCTTCCTCCTGCTAGCGGGCTGGATCCTG < 41bp 1 0.609060977058146 1 0.455826967954636 experiment 0.781878045883708 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743739 chr11:63743743 nonsynonymous SNV 0.529 2 25 hm5C_associated_SNPs_24252 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr19 3192541 3192541 1 + C T HNSC 3192559 + 3192539 3192579 41 CTCATGCGGCTACTGGACTTCTCCTACGAGCAGTACCAGAA CTTATGCGGCTACTGGACTTCTCCTACGAGCAGTACCAGAA < 41bp 1 0.516976163024669 1 0.764112830162048 experiment 0.966047673950661 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3192559 chr19:3192541 synonymous SNV . 0 3 hm5C_associated_SNPs_24253 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:3192538-3192566
64251 chr19 3192541 3192541 1 + C T HNSC 3192561 + 3192541 3192581 41 CATGCGGCTACTGGACTTCTCCTACGAGCAGTACCAGAAGG TATGCGGCTACTGGACTTCTCCTACGAGCAGTACCAGAAGG < 41bp 1 0.0886087820682854 1 0.375955045223236 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3192561 chr19:3192541 synonymous SNV . 0 1 hm5C_associated_SNPs_24254 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:3192538-3192566
64251 chr17 30372816 30372816 1 + C T HNSC 30372808 + 30372788 30372828 41 AGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCA AGTCAAGCTGCATTGCAACACTGCATGTTTGACTAACAGCA < 41bp 1 0.663022105445645 1 0.435618489980698 experiment 0.673955789108711 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30372808 chr17:30372816 synonymous SNV . 0 29 hm5C_associated_SNPs_24255 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:30372798-30372821
64251 chr22 26829615 26829615 1 + G C HNSC 26829613 + 26829593 26829633 41 GCCCTTGGGACCCCCGAGGACTGATTGTCTGACCTTGCTTC GCCCTTGGGACCCCCGAGGACTCATTGTCTGACCTTGCTTC < 41bp 1 0.461689388234781 1 0.175075650215149 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD2 ENSG00000128203 CDS Human protein_coding chr22:26829613 chr22:26829615 nonsynonymous SNV 0.363 1 23 hm5C_associated_SNPs_24256 0 0 1 MBNL2 POSTAR2 GSE68890,GSM1685420 chr22:26829600-26829620
64251 chr15 40259747 40259747 1 + C T HNSC 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGTT < 41bp 1 0.332495763341807 1 0.25035297870636 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259747 nonsynonymous SNV 0.950 0 40 hm5C_associated_SNPs_24257 0 0 1 FXR2 POSTAR2 ENCODE chr15:40259727-40259825
64251 chr19 42839480 42839480 1 + C T HNSC 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTTGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT < 41bp 1 0.111991110162804 1 0.186142772436142 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839480 synonymous SNV . 0 4 hm5C_associated_SNPs_24259 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:42839462-42839494
64251 chr6 27101036 27101036 1 + G A HNSC 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCGCCGAAATCCTGGAACTGGCGG < 41bp 1 0.699886470527553 1 0.527028560638428 experiment 0.600227058944895 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101036 synonymous SNV . 0 25 hm5C_associated_SNPs_24260 0 0 44 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27101000-27101040
64251 chr6 27101036 27101036 1 + G A HNSC 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAAATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA < 41bp 1 0.561413685197089 1 0.534898817539215 experiment 0.877172629605822 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101036 synonymous SNV . 0 3 hm5C_associated_SNPs_24261 0 0 44 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27101000-27101040
64251 chr3 52327209 52327209 1 + G T HNSC 52327226 + 52327206 52327246 41 AAGGTTGGTCCTCAGGGCCTCTCTAAGCCTTAGGGCCCCTC AAGTTTGGTCCTCAGGGCCTCTCTAAGCCTTAGGGCCCCTC < 41bp 1 0.398555779309175 1 0.817132174968719 experiment 1 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control GLYCTK ENSG00000168237 splicing Human protein_coding chr3:52327226 chr3:52327209 . . 0 4 hm5C_associated_SNPs_24262 0 0 3 DDX55 POSTAR2 ENCODE chr3:52327131-52327263
64251 chrX 73042039 73042039 1 - C T HNSC 73042026 - 73042006 73042046 41 CCCTCATGAAAAATGACTGACCACTGCTGGGCAGCAGGAGG CCCTCATAAAAAATGACTGACCACTGCTGGGCAGCAGGAGG < 41bp 1 0.05238534660051 1 0.14305317401886 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042026 chrX:73042039 . . 0 8 hm5C_associated_SNPs_24264 0 0 63 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73040480-73042460
64251 chr1 33237322 33237322 1 + G A HNSC 33237305 + 33237285 33237325 41 TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCGCCC TCCTCCAGCTCCGCCAGCCCCAGCTCCTGCTAGTTCCACCC < 41bp 1 0.35757233328791 1 0.490256637334824 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237305 chr1:33237322 nonsynonymous SNV 0.020 0 38 hm5C_associated_SNPs_24266 0 0 2 HNRNPK POSTAR2 ENCODE chr1:33237239-33237360
64251 chr17 7800529 7800529 1 + G A HNSC 7800537 + 7800517 7800557 41 AGTGAAAGACCCGCACTATGCTGAGATGGAGGAGAAGTACT AGTGAAAGACCCACACTATGCTGAGATGGAGGAGAAGTACT < 41bp 1 0.447622052178122 1 0.213505625724792 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7800537 chr17:7800529 synonymous SNV . 0 13 hm5C_associated_SNPs_24268 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7800522-7800571
64251 chr17 65905793 65905793 1 + G A HNSC 65905785 + 65905765 65905805 41 AATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG AATAAAAATAGAGCCTGATTCTGAAAAAAATGAGGTAAAAG < 41bp 1 0.432915982992161 1 0.748916566371918 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65905785 chr17:65905793 nonsynonymous SNV 0.983 0 29 hm5C_associated_SNPs_24270 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65905771-65905807
64251 chr17 43226879 43226879 1 + G C HNSC 43226860 + 43226840 43226880 41 GACGACTCGTCCGCTGGCGGCGACTTCCCGCCGCCGGCAGA GACGACTCGTCCGCTGGCGGCGACTTCCCGCCGCCGGCACA < 41bp 1 0.46204099674836 1 0.0977369248867035 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226860 chr17:43226879 nonsynonymous SNV 0.002 0 40 hm5C_associated_SNPs_24273 0 0 1 RBM15 POSTAR2 ENCODE chr17:43226820-43226896
64251 chr19 5691434 5691434 1 + C A HNSC 5691427 + 5691407 5691447 41 CATGGAGTTACTGAAGGTCTCCAAGGACAAACGGGCCCTCA CATGGAGTTACTGAAGGTCTCCAAGGAAAAACGGGCCCTCA < 41bp 1 0.419875575366861 1 0.932596564292908 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691427 chr19:5691434 nonsynonymous SNV 0.998 0 28 hm5C_associated_SNPs_24276 0 0 71 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:5691420-5691440
64251 chr3 9691417 9691417 1 + C A HNSC 9691405 + 9691385 9691425 41 CAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAA CAGTACCGGGCCAAGGATGGCAGCGGGACCGGAGGCTCTAA < 41bp 1 0.738808823633563 1 0.890848755836487 experiment 0.522382352732873 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9691405 chr3:9691417 synonymous SNV . 0 33 hm5C_associated_SNPs_24277 0 0 3 DDX3X POSTAR2 ENCODE chr3:9691344-9691431
64251 chr16 68390961 68390961 1 + G A HNSC 68390977 + 68390957 68390997 41 GGGGGCTGCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTA GGGGACTGCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTA < 41bp 1 0.207884992412752 1 0.464602530002594 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390977 chr16:68390961 nonsynonymous SNV 0.315 0 5 hm5C_associated_SNPs_24278 0 0 3 BUD13 POSTAR2 ENCODE chr16:68390955-68390985
64251 chr17 7752801 7752801 1 + G A HNSC 7752799 + 7752779 7752819 41 CTTCTGCCCAGCCCACACCCCCGTCAGCCTCTGTCCCTGGA CTTCTGCCCAGCCCACACCCCCATCAGCCTCTGTCCCTGGA < 41bp 1 0.019221421431487 1 0.116546452045441 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752799 chr17:7752801 synonymous SNV . 0 23 hm5C_associated_SNPs_24280 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:7752751-7752816
64251 chr17 7752801 7752801 1 + G A HNSC 7752800 + 7752780 7752820 41 TTCTGCCCAGCCCACACCCCCGTCAGCCTCTGTCCCTGGAA TTCTGCCCAGCCCACACCCCCATCAGCCTCTGTCCCTGGAA < 41bp 1 0.235081172219035 1 0.141557931900024 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752800 chr17:7752801 synonymous SNV . 0 22 hm5C_associated_SNPs_24281 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:7752751-7752816
64251 chr9 138395634 138395634 1 + C T HNSC 138395653 + 138395633 138395673 41 TCTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTC TTTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTC < 41bp 1 0.439280315941215 1 0.121225208044052 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395653 chr9:138395634 synonymous SNV . 0 2 hm5C_associated_SNPs_24287 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr17 55194253 55194253 1 + C A HNSC 55194240 + 55194220 55194260 41 GGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTC GGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGAAGAAGTC < 41bp 1 0.0430556347741109 1 0.117238789796829 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194240 chr17:55194253 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_24288 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194253 55194253 1 + C A HNSC 55194241 + 55194221 55194261 41 GTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCC GTCTGACTTTGTCACCCTGCCGTTTCAGGGAGAAGAAGTCC < 41bp 1 0.0467620065522466 1 0.0850552916526794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194241 chr17:55194253 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_24289 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr8 77764690 77764690 1 + G C HNSC 77764692 + 77764672 77764712 41 AGTAACATAGTGAGTGCAGACTGCCAAATCATGAAGGATGT AGTAACATAGTGAGTGCACACTGCCAAATCATGAAGGATGT < 41bp 1 0.135849708801454 1 0.140226155519485 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77764692 chr8:77764690 nonsynonymous SNV 0.320 2 19 hm5C_associated_SNPs_24290 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr8:77764683-77764702
64251 chr20 44045292 44045292 1 + C A HNSC 44045286 + 44045266 44045306 41 GGGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGT GGGGCCACCCTTCCTGCAGGCCCCATAAGGTGCAGAGCTGT < 41bp 1 0.641376260254938 1 0.0407969653606415 experiment 0.717247479490124 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045286 chr20:44045292 stopgain 0.998 1 27 hm5C_associated_SNPs_24292 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045292 44045292 1 + C A HNSC 44045287 + 44045267 44045307 41 GGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTG GGGCCACCCTTCCTGCAGGCCCCATAAGGTGCAGAGCTGTG < 41bp 1 0.215758157163352 1 0.0321584939956665 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045287 chr20:44045292 stopgain 0.998 1 26 hm5C_associated_SNPs_24293 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045292 44045292 1 + C A HNSC 44045288 + 44045268 44045308 41 GGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTGG GGCCACCCTTCCTGCAGGCCCCATAAGGTGCAGAGCTGTGG < 41bp 1 0.401989921656558 1 0.0762265622615814 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045288 chr20:44045292 stopgain 0.998 1 25 hm5C_associated_SNPs_24294 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045292 44045292 1 + C A HNSC 44045289 + 44045269 44045309 41 GCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTGGG GCCACCCTTCCTGCAGGCCCCATAAGGTGCAGAGCTGTGGG < 41bp 1 0.621563072625691 1 0.169166475534439 experiment 0.756873854748618 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045289 chr20:44045292 stopgain 0.998 1 24 hm5C_associated_SNPs_24295 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr6 26205156 26205156 1 + G A HNSC 26205141 + 26205121 26205161 41 AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGAACGCA < 41bp 1 0.689732077342331 1 0.346016347408295 experiment 0.620535845315338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4E ENSG00000198518 CDS Human other chr6:26205141 chr6:26205156 nonsynonymous SNV 0.051 0 36 hm5C_associated_SNPs_24296 0 0 48 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26204840-26205240
64251 chr17 46135825 46135825 1 + G T HNSC 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACTTCTTACTCTTCAGCCCCTAGGTGGAAAGCCTGCCTGT < 41bp 1 0.719349517351642 1 0.287293970584869 experiment 0.561300965296716 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135825 stopgain 0.992 0 22 hm5C_associated_SNPs_24299 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr11 77301379 77301379 1 + C A HNSC 77301390 + 77301370 77301410 41 CATGTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGC CATGTCCCCAGAGACGGGTGCGGTGAGGCTATTGGCTCAGC < 41bp 1 0.516863282575244 1 0.446054071187973 experiment 0.966273434849512 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301390 chr11:77301379 synonymous SNV . 0 10 hm5C_associated_SNPs_24301 0 0 3 DDX3X POSTAR2 ENCODE chr11:77301368-77301391
64251 chr17 16342900 16342900 1 + G A HNSC 16342881 + 16342861 16342901 41 TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTGA TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTAA < 41bp 1 0.12949129927689 1 0.0657915771007538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342881 chr17:16342900 . . 0 40 hm5C_associated_SNPs_24302 0 0 47 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr7 44741199 44741199 1 + G C HNSC 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCGCCACCCCGAGGCCAGATCCAGCTTTCATGAGATGCTTC < 41bp 1 0.194802845474623 1 0.438447773456573 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741199 nonsynonymous SNV 0.997 2 29 hm5C_associated_SNPs_24314 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr18 13067879 13067879 1 + G A HNSC 13067893 + 13067873 13067913 41 CTTATGGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC CTTATGAAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC < 41bp 1 0.309427463400998 1 0.412310183048248 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13067893 chr18:13067879 nonsynonymous SNV 0.938 2 7 hm5C_associated_SNPs_24318 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13067842-13067880
64251 chr8 22106602 22106602 1 + C T HNSC 22106604 + 22106584 22106624 41 AAGAGGCCAAGATGAAGGCTCCTCCCAAAGCAGCCAGGAAG AAGAGGCCAAGATGAAGGTTCCTCCCAAAGCAGCCAGGAAG < 41bp 1 0.0177433188125345 1 0.0435902774333954 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POLR3D ENSG00000168495 CDS Human protein_coding chr8:22106604 chr8:22106602 nonsynonymous SNV 0.990 0 19 hm5C_associated_SNPs_24319 0 0 13 BUD13 POSTAR2 ENCODE chr8:22106549-22106658
64251 chr2 38908571 38908571 1 + C T HNSC 38908580 + 38908560 38908600 41 AGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAA AGAGCACAAGCTAGTCAGGCCACACCAGTCAACCTGACCAA < 41bp 1 0.218710013478068 1 0.0790366232395172 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908580 chr2:38908571 synonymous SNV . 0 12 hm5C_associated_SNPs_24321 0 0 2 YBX3 POSTAR2 ENCODE chr2:38908560-38908584
64251 chr1 154248134 154248134 1 + C T HNSC 154248129 + 154248109 154248149 41 CCTCCAGCCCTGGATGATGCCTTTTCCATCCTGGACTTATT CCTCCAGCCCTGGATGATGCCTTTTTCATCCTGGACTTATT < 41bp 1 0.116770599204213 1 0.0346508920192719 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAX1 ENSG00000143575 CDS Human protein_coding chr1:154248129 chr1:154248134 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_24323 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154248091-154248179
64251 chrX 70514363 70514363 1 + C T HNSC 70514364 + 70514344 70514384 41 GACAGATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT GACAGATGCAGTGAAGGCTTCTTCCTGCTAACCACGTAAGT < 41bp 1 0.124820577629806 1 0.222309350967407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70514364 chrX:70514363 nonsynonymous SNV 0.998 1 20 hm5C_associated_SNPs_24324 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:70514297-70514370
64251 chr2 32824950 32824950 1 + C T HNSC 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACTT < 41bp 1 0.121829968329964 1 0.601558148860931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824950 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_24325 0 0 3 FUS POSTAR2 SRX029328 chr2:32824936-32824959
64251 chr1 983443 983443 1 + G A HNSC 983446 + 983426 983466 41 AGGAGCCATTGCTGCGGGAGCCACGGCCAGAGCCACCACTG AGGAGCCATTGCTGCGGAAGCCACGGCCAGAGCCACCACTG < 41bp 1 0.27067207118303 1 0.280228912830353 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:983446 chr1:983443 nonsynonymous SNV 0.006 0 18 hm5C_associated_SNPs_24326 0 0 5 FXR2 POSTAR2 ENCODE chr1:983411-983461
64251 chr7 106826888 106826888 1 + C G HNSC 106826904 + 106826884 106826924 41 TGGCCTTCAACTGTCTGGCACTGTTTTTTGAAAGGTAAAAC TGGCGTTCAACTGTCTGGCACTGTTTTTTGAAAGGTAAAAC < 41bp 1 0.120445298507976 1 0.0270611345767975 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HBP1 ENSG00000105856 CDS Human protein_coding chr7:106826904 chr7:106826888 nonsynonymous SNV 0.995 5 5 hm5C_associated_SNPs_24327 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:106826865-106826903
64251 chr4 128811293 128811293 1 + C T HNSC 128811297 + 128811277 128811317 41 GACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATCGTA GACTAGGGGTATGGAGTCACCATGGGGTTATCAGAATCGTA < 41bp 1 0.714079411360447 1 0.256567001342773 experiment 0.571841177279107 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811297 chr4:128811293 nonsynonymous SNV 0.397 0 17 hm5C_associated_SNPs_24328 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:128811275-128811300
64251 chr8 145139721 145139721 1 + C T HNSC 145139712 + 145139692 145139732 41 TACTTGCTCCCCGGCCTCTCCCGCTTCGTCTCCATCGGCCT TACTTGCTCCCCGGCCTCTCCCGCTTCGTTTCCATCGGCCT < 41bp 1 0.229002328263402 1 0.225277185440063 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139712 chr8:145139721 synonymous SNV . 0 30 hm5C_associated_SNPs_24329 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:145139719-145139769
64251 chrX 51638490 51638490 1 + C T HNSC 51638489 + 51638469 51638509 41 AAATGCTGCCTATGATTTTTCCCAGGCAGCAACCACTGGTG AAATGCTGCCTATGATTTTTCTCAGGCAGCAACCACTGGTG < 41bp 1 0.733439795948776 1 0.334851056337357 experiment 0.533120408102448 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638489 chrX:51638490 synonymous SNV . 0 22 hm5C_associated_SNPs_24330 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chrX:51638480-51638500
64251 chr18 13067878 13067878 1 + G A HNSC 13067893 + 13067873 13067913 41 CTTATGGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC CTTATAGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC < 41bp 1 0.280402888347686 1 0.487709075212479 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13067893 chr18:13067878 nonsynonymous SNV 0.931 4 6 hm5C_associated_SNPs_24331 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13067842-13067880
64251 chr11 118498114 118498114 1 + C T HNSC 118498128 + 118498108 118498148 41 TGAGCTCTATTGAGAAGGACCTGCAAGAGATCATGGACTCA TGAGCTTTATTGAGAAGGACCTGCAAGAGATCATGGACTCA < 41bp 1 0.5338785825617 1 0.181615203619003 experiment 0.9322428348766 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118498128 chr11:118498114 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_24332 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:118498099-118498129
64251 chr6 160496887 160496887 1 + C T HNSC 160496884 + 160496864 160496904 41 TCGCTCTTTGTTTAGGATATCGGCCGGGTAGCAGGACCACC TCGCTCTTTGTTTAGGATATCGGTCGGGTAGCAGGACCACC < 41bp 1 0.0617898149970427 1 0.503226816654205 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160496884 chr6:160496887 synonymous SNV . 0 24 hm5C_associated_SNPs_24333 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:160496879-160496914
64251 chr4 128811294 128811294 1 + C T HNSC 128811293 + 128811273 128811313 41 GCAAGACTAGGGGTATGGAGCCACCATGGGGTTATCAGAAT GCAAGACTAGGGGTATGGAGCTACCATGGGGTTATCAGAAT < 41bp 1 0.408223851033707 1 0.205216497182846 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811293 chr4:128811294 nonsynonymous SNV 0.342 0 22 hm5C_associated_SNPs_24334 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:128811275-128811300
64251 chr4 128811294 128811294 1 + C T HNSC 128811297 + 128811277 128811317 41 GACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATCGTA GACTAGGGGTATGGAGCTACCATGGGGTTATCAGAATCGTA < 41bp 1 0.754376983837124 1 0.289064228534698 experiment 0.491246032325753 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811297 chr4:128811294 nonsynonymous SNV 0.342 0 18 hm5C_associated_SNPs_24335 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:128811275-128811300
64251 chrX 153641566 153641566 1 + C T HNSC 153641548 + 153641528 153641568 41 CTTTCCTGTCCTCTAGGGATCCTGAAACTCCGCCACATCTG CTTTCCTGTCCTCTAGGGATCCTGAAACTCCGCCACATTTG < 41bp 1 0.305460261229619 1 0.111875504255295 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAZ ENSG00000102125 CDS Human protein_coding chrX:153641548 chrX:153641566 synonymous SNV . 0 39 hm5C_associated_SNPs_24336 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:153641560-153641580
64251 chr19 50548313 50548313 1 + G A HNSC 50548302 + 50548282 50548322 41 CGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAAC CGACCACAGCCAGCAGGATTCTGTTCAGGAAAGGGAGAAAC < 41bp 1 0.297924781055226 1 0.148166120052338 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548302 chr19:50548313 nonsynonymous SNV 0.005 0 32 hm5C_associated_SNPs_24338 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:50548295-50548323
64251 chr19 803562 803562 1 + G A HNSC 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCAGGGATCTGACGAGCTTTTCTCTACTT < 41bp 1 0.402370165725258 1 0.268792748451233 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803562 nonsynonymous SNV 0.990 2 15 hm5C_associated_SNPs_24339 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr19 58758137 58758137 1 + G A HNSC 58758154 + 58758134 58758174 41 GCAGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCT GCAAGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCT < 41bp 1 0.461499027110045 1 0.460327297449112 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758154 chr19:58758137 nonsynonymous SNV 0.003 0 4 hm5C_associated_SNPs_24340 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr19 58758137 58758137 1 + G A HNSC 58758156 + 58758136 58758176 41 AGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCTTG AAGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCTTG < 41bp 1 0.58072024703016 1 0.79943311214447 experiment 0.838559505939679 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758156 chr19:58758137 nonsynonymous SNV 0.003 0 2 hm5C_associated_SNPs_24341 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr15 91448716 91448716 1 + G A HNSC 91448697 + 91448677 91448717 41 CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCAG < 41bp 1 0.262246930819251 1 0.214571356773376 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91448697 chr15:91448716 nonsynonymous SNV 0.992 0 40 hm5C_associated_SNPs_24342 0 0 7 DDX24 POSTAR2 ENCODE chr15:91448682-91448738
64251 chr19 58758138 58758138 1 + G A HNSC 58758154 + 58758134 58758174 41 GCAGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCT GCAGAGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCT < 41bp 1 0.471011884420132 1 0.424341857433319 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758154 chr19:58758138 nonsynonymous SNV 0.002 0 5 hm5C_associated_SNPs_24343 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr19 58758138 58758138 1 + G A HNSC 58758156 + 58758136 58758176 41 AGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCTTG AGAGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCTTG < 41bp 1 0.588384803124236 1 0.776582837104797 experiment 0.823230393751529 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758156 chr19:58758138 nonsynonymous SNV 0.002 0 3 hm5C_associated_SNPs_24344 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr20 42271216 42271216 1 + C T HNSC 42271196 + 42271176 42271216 41 CCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATC CCAGTAAACTACCAAAGGACCAACAGGATGCCAAACATATT < 41bp 1 0.44740296195893 1 0.216137796640396 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IFT52 ENSG00000101052 CDS Human protein_coding chr20:42271196 chr20:42271216 synonymous SNV . 0 41 hm5C_associated_SNPs_24345 0 0 2 YBX3 POSTAR2 ENCODE chr20:42271178-42271254
64251 chr22 18979447 18979447 1 + G T HNSC 18979435 + 18979415 18979455 41 AGGCCCGTCCTGGTGGAGTTCACCCTGCTGGAGATGGAGAA AGGCCCGTCCTGGTGGAGTTCACCCTGCTGGATATGGAGAA < 41bp 1 0.270509545403557 1 0.128181636333466 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979435 chr22:18979447 . . 0 33 hm5C_associated_SNPs_24346 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:18979412-18979447
64251 chr22 18979447 18979447 1 + G T HNSC 18979466 + 18979446 18979486 41 AGATGGAGAAGCGAACCAAGCCTGTCTGTGTGTTCTGGAAC ATATGGAGAAGCGAACCAAGCCTGTCTGTGTGTTCTGGAAC < 41bp 1 0.122442272736166 1 0.0580072999000549 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979466 chr22:18979447 . . 0 2 hm5C_associated_SNPs_24347 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:18979412-18979447
64251 chr15 96875646 96875646 1 + G C HNSC 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AACCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC < 41bp 1 0.571846542617078 1 0.432192027568817 experiment 0.856306914765843 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875646 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_24349 0 0 7 EWSR1 POSTAR2 SRX029343 chr15:96875613-96875646
64251 chr19 47422368 47422368 1 + G T HNSC 47422359 + 47422339 47422379 41 CTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAGAAACAA CTGACCAGCTGGGGCTGGAGCAGGACTTTTAGCAGAAACAA < 41bp 1 0.791527106296533 1 0.718389391899109 experiment 0.416945787406934 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422359 chr19:47422368 stopgain 1.000 1 30 hm5C_associated_SNPs_24350 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:47422332-47422370
64251 chr15 66777514 66777514 1 + G A HNSC 66777521 + 66777501 66777541 41 GCCAAGGACCCCCGGGAGGCCCCTTAGCTGTGAGTAGCCTG GCCAAGGACCCCCAGGAGGCCCCTTAGCTGTGAGTAGCCTG < 41bp 1 0.128734125469579 1 0.0778791010379791 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66777521 chr15:66777514 nonsynonymous SNV 0.864 1 14 hm5C_associated_SNPs_24351 0 0 2 PRPF8 POSTAR2 ENCODE chr15:66777495-66777573
64251 chr16 30779633 30779633 1 + G A HNSC 30779624 + 30779604 30779644 41 AAGAAGGAGGAGCTGGTCCCCTCTGAAGAGGACTTCCAGGG AAGAAGGAGGAGCTGGTCCCCTCTGAAGAAGACTTCCAGGG < 41bp 1 0.495761201662577 1 0.483616769313812 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779624 chr16:30779633 synonymous SNV . 0 30 hm5C_associated_SNPs_24352 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:30779606-30779642
64251 chr17 21731304 21731304 1 + G A HNSC 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGAAAGATGGCGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.131327506849856 1 0.107180327177048 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731304 stopgain 0.991 0 8 hm5C_associated_SNPs_24353 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr8 64099575 64099575 1 + C T HNSC 64099584 + 64099564 64099604 41 AAGGACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCT AAGGACCTCAGTCACAGGCCCAGCCTCACCAAGTGCAGCCT < 41bp 1 0.294846753967622 1 0.0596712231636047 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64099584 chr8:64099575 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_24354 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:64099560-64099580
64251 chr15 89015921 89015921 1 + G A HNSC 89015924 + 89015904 89015944 41 GGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAGC GGAAAGAAATTTGAGGAAATCCCAATTGCACACATTAAAGC < 41bp 1 0.635541078160519 1 0.29617315530777 experiment 0.728917843678963 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89015924 chr15:89015921 synonymous SNV . 0 18 hm5C_associated_SNPs_24357 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:89015913-89015937
64251 chr14 64990072 64990072 1 + G C HNSC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC CAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC < 41bp 1 0.610394214981883 1 0.55030483007431 experiment 0.779211570036234 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990072 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_24358 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64990042-64990078
64251 chr14 103390078 103390078 1 + T G HNSC 103390064 + 103390044 103390084 41 CCAGCACTGACCCAGGCGGTCTCCAAACTCTGGGTCCCCAA CCAGCACTGACCCAGGCGGTCTCCAAACTCTGGGGCCCCAA < 41bp 1 0.675002988883155 1 0.833601713180542 experiment 0.64999402223369 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AMN ENSG00000166126 CDS Human protein_coding chr14:103390064 chr14:103390078 nonsynonymous SNV 0.950 4 35 hm5C_associated_SNPs_24359 0 0 4 BUD13 POSTAR2 ENCODE chr14:103389998-103390092
64251 chr10 102114253 102114253 1 + C A HNSC 102114241 + 102114221 102114261 41 ACCACAAGTTTTCAGAAACACATGCTGATCCTCATAATTCC ACCACAAGTTTTCAGAAACACATGCTGATCCTAATAATTCC < 41bp 1 0.27708902614274 1 0.0934436619281769 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102114241 chr10:102114253 nonsynonymous SNV 0.846 4 33 hm5C_associated_SNPs_24360 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:102114220-102114300
64251 chr22 40697290 40697290 1 + G A HNSC 40697295 + 40697275 40697315 41 ACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGG ACGCATTGAATGTGGAGCTCCCAGACCTTCAAACCAAAGGG < 41bp 1 0.188098698826385 1 0.357047021389008 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40697295 chr22:40697290 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_24361 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:40697261-40697299
64251 chr1 44069435 44069435 1 + G A HNSC 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGACAA < 41bp 1 0.399057128141884 1 0.0409096479415894 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069435 nonsynonymous SNV 0.999 0 38 hm5C_associated_SNPs_24362 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:44069421-44069438
64251 chr4 56291574 56291574 1 + G A HNSC 56291562 + 56291542 56291582 41 GTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATT GTGACAATCATAGGAGGCATCGTTTTTTTGGCATTTGCATT < 41bp 1 0.101865719702438 1 0.0917621850967407 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291562 chr4:56291574 synonymous SNV . 0 33 hm5C_associated_SNPs_24363 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:56291540-56291575
64251 chr6 42986153 42986153 1 + C T HNSC 42986152 + 42986132 42986172 41 CACATGTATGTCTTTGGGGGCCGTGCCGACCGCTTTGGGCC CACATGTATGTCTTTGGGGGCTGTGCCGACCGCTTTGGGCC < 41bp 1 0.216270571696332 1 0.175445139408112 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42986152 chr6:42986153 nonsynonymous SNV 0.975 4 22 hm5C_associated_SNPs_24365 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:42986118-42986166
64251 chr2 97007517 97007517 1 + G A HNSC 97007527 + 97007507 97007547 41 CCCAGTCCTCGAAGACTTTCCTCAGAATGACGATGAGAAGG CCCAGTCCTCAAAGACTTTCCTCAGAATGACGATGAGAAGG < 41bp 1 0.555113394565382 1 0.277774155139923 experiment 0.889773210869236 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007527 chr2:97007517 nonsynonymous SNV 0.987 0 11 hm5C_associated_SNPs_24366 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:97007483-97007520
64251 chr19 46509871 46509871 1 + C T HNSC 46509891 + 46509871 46509911 41 CGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC TGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC < 41bp 1 0.104474064242779 1 0.0807034075260162 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509891 chr19:46509871 nonsynonymous SNV 0.907 4 1 hm5C_associated_SNPs_24367 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr12 62785134 62785134 1 + G C HNSC 62785130 + 62785110 62785150 41 TTTACATTCCAGTTCAACAACTTAGGCAATACTGATATCAA TTTACATTCCAGTTCAACAACTTACGCAATACTGATATCAA < 41bp 1 0.0584751799033286 1 0.0669218301773071 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP15 ENSG00000135655 CDS Human protein_coding chr12:62785130 chr12:62785134 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_24368 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:62785105-62785136
64251 chr15 38773557 38773557 1 + C T KICH 38773574 + 38773554 38773594 41 CAACGATTACAATGGCACATCTACTTGCTGCTCGTGAAGAT CAATGATTACAATGGCACATCTACTTGCTGCTCGTGAAGAT < 41bp 1 0.391107299758663 1 0.168533056974411 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM98B ENSG00000171262 CDS Human protein_coding chr15:38773574 chr15:38773557 nonsynonymous SNV 0.197 3 4 hm5C_associated_SNPs_24370 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:38773540-38773605
64251 chr1 2235813 2235813 1 + G T KICH 2235794 + 2235774 2235814 41 CATCCAGCTCCGCCAAGGACCTGGGCTCCCCGGGTGCGCGT CATCCAGCTCCGCCAAGGACCTGGGCTCCCCGGGTGCGCTT < 41bp 1 0.78548928973275 1 0.683588624000549 experiment 0.429021420534501 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2235794 chr1:2235813 nonsynonymous SNV 0.008 1 40 hm5C_associated_SNPs_24371 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:2235791-2235836
64251 chr8 145139183 145139183 1 + T C KICH 145139185 + 145139165 145139205 41 CTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAAGG CTTGACCTGCTCAATCTCCTCCAGACCTTCTGCCAGAAAGG < 41bp 1 0.539022557434636 1 0.55097109079361 experiment 0.921954885130728 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139185 chr8:145139183 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_24372 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145139180-145139200
64251 chr3 47041771 47041771 1 + G A KICH 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCGCCACTGGATGGACCGCGGCCCTTTCCTGCTGCTC < 41bp 1 0.428939734325509 1 0.46638748049736 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041771 synonymous SNV . 0 19 hm5C_associated_SNPs_24373 0 0 1 RBM15 POSTAR2 ENCODE chr3:47041760-47041825
64251 chr6 126210643 126210643 1 + G A KICH 126210642 + 126210622 126210662 41 TGATGTTGAACTGAAGGGGGCGCTAGATTTAGAAACCTGTG TGATGTTGAACTGAAGGGGGCACTAGATTTAGAAACCTGTG < 41bp 1 0.285164133896051 1 0.204472005367279 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210642 chr6:126210643 synonymous SNV . 0 22 hm5C_associated_SNPs_24375 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:126210634-126210655
64251 chr4 3107131 3107131 1 + G A KICH 3107132 + 3107112 3107152 41 CCCTGTGGAGGTTTGCTGAGCTGGCTCACCTGGTTCGGCCT CCCTGTGGAGGTTTGCTGAACTGGCTCACCTGGTTCGGCCT < 41bp 1 0.346698319158763 1 0.183101534843445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3107132 chr4:3107131 synonymous SNV . 0 20 hm5C_associated_SNPs_24376 0 0 8 DDX24 POSTAR2 ENCODE chr4:3107103-3107164
64251 chr17 79663491 79663491 1 + G A KICH 79663489 + 79663469 79663509 41 GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC GGAGAAGCTTCGCCGGGCAGCCAAGGAGGCAGAGCGCCAGC < 41bp 1 0.508411942241764 1 0.670639276504517 experiment 0.983176115516473 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663489 chr17:79663491 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_24377 0 0 6 DDX24 POSTAR2 ENCODE chr17:79663407-79663529
64251 chr16 70164360 70164360 1 + T A KICH 70164350 + 70164330 70164370 41 TCAGATCTATGACCGGACATCTGTTCTTCATGTAATGGTCA TCAGATCTATGACCGGACATCTGTTCTTCAAGTAATGGTCA < 41bp 1 0.0919961780083815 1 0.0905458927154541 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDPR ENSG00000090857 CDS Human protein_coding chr16:70164350 chr16:70164360 nonsynonymous SNV 0.983 2 31 hm5C_associated_SNPs_24379 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:70164355-70164373
64251 chrX 103431192 103431192 1 + C T KICH 103431198 + 103431178 103431218 41 CTGAGATGGGTCTTCGGGAGCAACTTGATATTATTAAGATC CTGAGATGGGTCTTTGGGAGCAACTTGATATTATTAAGATC < 41bp 1 0.304204911520448 1 0.208489209413528 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103431198 chrX:103431192 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_24380 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:103431147-103431205
64251 chr1 144014069 144014069 1 + G A KICH 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATAC < 41bp 1 0.197186467724421 1 0.282242774963379 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014069 . 0.988 0 40 hm5C_associated_SNPs_24381 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:144014065-144014084
64251 chr1 144014069 144014069 1 + G A KICH 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATACAG < 41bp 1 0.226728623165718 1 0.478270620107651 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014069 . 0.988 0 38 hm5C_associated_SNPs_24382 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:144014065-144014084
64251 chr5 54654428 54654428 1 + T C KICH 54654434 + 54654414 54654454 41 AATACATTCAGATGTCTGGTCGTGCTGGAAGGAGAGGAATG AATACATTCAGATGCCTGGTCGTGCTGGAAGGAGAGGAATG < 41bp 1 0.219840801200112 1 0.108363717794418 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54654434 chr5:54654428 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_24385 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr5:54654416-54654432
64251 chr13 49771038 49771038 1 + A T KICH 49771026 + 49771006 49771046 41 TTTCTAGTTTGGACCATTTTCAGAAAAATGTGATATTACTA TTTCTAGTTTGGACCATTTTCAGAAAAATGTGTTATTACTA < 41bp 1 0.685424544566873 1 0.87929368019104 experiment 0.629150910866254 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49771026 chr13:49771038 nonsynonymous SNV 0.996 0 33 hm5C_associated_SNPs_24387 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr13:49771037-49771055
64251 chr15 81295653 81295653 1 + G A KICH 81295655 + 81295635 81295675 41 TCAGGCTTTAAGGGAGAGGTCTTCGCCCAGGACTTTACCGC TCAGGCTTTAAGGGAGAGATCTTCGCCCAGGACTTTACCGC < 41bp 1 0.272345966705914 1 0.112213909626007 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81295655 chr15:81295653 synonymous SNV . 0 19 hm5C_associated_SNPs_24388 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:81295611-81295676
64251 chr16 24817998 24817998 1 + T C KICH 24817997 + 24817977 24818017 41 CACCATCTCAGCAGCAGCCACTCCATCAGCCAGCCATGAAG CACCATCTCAGCAGCAGCCACCCCATCAGCCAGCCATGAAG < 41bp 1 0.379781085979985 1 0.511662602424622 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24817997 chr16:24817998 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_24389 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:24817985-24818000
64251 chr9 131730829 131730829 1 + A G KICH 131730830 + 131730810 131730850 41 TTGTTCAGTGCCTTCGGGAACAGTCCATGCTGCTAGAAATT TTGTTCAGTGCCTTCGGGAGCAGTCCATGCTGCTAGAAATT < 41bp 1 0.0399362497035913 1 0.228177636861801 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131730830 chr9:131730829 synonymous SNV . 0 20 hm5C_associated_SNPs_24390 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131730812-131730845
64251 chr18 9954094 9954094 1 + T A KICH 9954099 + 9954079 9954119 41 ACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCA ACATTCGGATAAACCAGGATCAACCTCAACTGCATCCTTCA < 41bp 1 0.257820167573931 1 0.140516489744186 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VAPA ENSG00000101558 CDS Human protein_coding chr18:9954099 chr18:9954094 synonymous SNV . 0 16 hm5C_associated_SNPs_24395 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9954040-9954099
64251 chr17 42225428 42225428 1 + C A KICH 42225441 + 42225421 42225461 41 TCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGG TCCAGCAAGCCCAGTGCTGACAGCCGTCCATCATGCATAGG < 41bp 1 0.545447812654459 1 0.0785290002822876 experiment 0.909104374691081 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225441 chr17:42225428 nonsynonymous SNV 0.024 0 8 hm5C_associated_SNPs_24396 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:42225396-42225431
64251 chr17 42225428 42225428 1 + C A KICH 42225444 + 42225424 42225464 41 AGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC AGCAAGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC < 41bp 1 0.0434092570601248 1 0.514319896697998 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225444 chr17:42225428 nonsynonymous SNV 0.024 0 5 hm5C_associated_SNPs_24397 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:42225396-42225431
64251 chr11 73360070 73360070 1 + C A KICH 73360060 + 73360040 73360080 41 CGTGGCTCCTCTGACAGGTCCCGCCTGACTCCGCTCTGGAA CGTGGCTCCTCTGACAGGTCCCGCCTGACTACGCTCTGGAA < 41bp 1 0.105977634993307 1 0.0444432199001312 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHB1 ENSG00000021300 CDS Human protein_coding chr11:73360060 chr11:73360070 nonsynonymous SNV 0.561 2 31 hm5C_associated_SNPs_24399 0 0 5 DDX3X POSTAR2 ENCODE chr11:73359967-73360077
64251 chr1 116946537 116946537 1 + T C KICH 116946536 + 116946516 116946556 41 TGGTTCTGTGCCTTCCCCTACTCTCTTCTCATCTTCGTATA TGGTTCTGTGCCTTCCCCTACCCTCTTCTCATCTTCGTATA < 41bp 1 0.0477090797503636 1 0.059569776058197 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116946536 chr1:116946537 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_24400 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:116946505-116946554
64251 chr6 27861260 27861260 1 + C G KICH 27861272 + 27861252 27861292 41 GGCTAAATCTGCTCCTGCCCCCAAAAAGGGCTCCAAGAAAG GGCTAAATGTGCTCCTGCCCCCAAAAAGGGCTCCAAGAAAG < 41bp 1 0.553445891620117 1 0.424577951431274 experiment 0.893108216759767 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIST1H2BO ENSG00000196331 CDS Human other chr6:27861272 chr6:27861260 nonsynonymous SNV 0.020 1 9 hm5C_associated_SNPs_24401 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27861200-27861260
64251 chr19 12917591 12917591 1 + A T KICH 12917604 + 12917584 12917624 41 GTCGATGAGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCT GTCGATGTGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCT < 41bp 1 0.674031893609806 1 0.171734899282455 experiment 0.651936212780388 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12917604 chr19:12917591 nonsynonymous SNV 0.999 5 8 hm5C_associated_SNPs_24402 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12917582-12917608
64251 chr19 12917591 12917591 1 + A T KICH 12917605 + 12917585 12917625 41 TCGATGAGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCTA TCGATGTGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCTA < 41bp 1 0.655712199937288 1 0.537184000015259 experiment 0.688575600125424 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12917605 chr19:12917591 nonsynonymous SNV 0.999 5 7 hm5C_associated_SNPs_24403 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12917582-12917608
64251 chr19 12917591 12917591 1 + A T KICH 12917606 + 12917586 12917626 41 CGATGAGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCTAG CGATGTGGCGGGCAGGGGCCCCGTGCTGGGTGCGCCCCTAG < 41bp 1 0.542991873909088 1 0.398810565471649 experiment 0.914016252181825 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12917606 chr19:12917591 nonsynonymous SNV 0.999 5 6 hm5C_associated_SNPs_24404 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12917582-12917608
64251 chrX 47092432 47092432 1 + A G KICH 47092421 + 47092401 47092441 41 ATCTCGCACAGCTGCGTTGGCTGTAGAAGAGAACGGACGGC ATCTCGCACAGCTGCGTTGGCTGTAGAAGAGGACGGACGGC < 41bp 1 0.730814487588905 1 0.541950285434723 experiment 0.53837102482219 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47092421 chrX:47092432 nonsynonymous SNV 0.155 0 32 hm5C_associated_SNPs_24407 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47092418-47092445
64251 chr14 103802243 103802243 1 + T C KICH 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCGCAGCGTGTCAGACCAGTTCTATCGCCACAAGATG < 41bp 1 0.186885061025554 1 0.0626984238624573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802243 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_24408 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr3 10191570 10191570 1 + T C KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCCGGAAGACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.514458710714842 1 0.407610505819321 experiment 0.971082578570316 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191570 nonsynonymous SNV 0.997 5 10 hm5C_associated_SNPs_24411 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr1 39888090 39888090 1 + G A KIRC 39888071 + 39888051 39888091 41 TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGC TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAAC < 41bp 1 0.0336309132429318 1 0.159667730331421 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39888071 chr1:39888090 synonymous SNV . 0 40 hm5C_associated_SNPs_24412 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39888058-39888134
64251 chr1 39888091 39888091 1 + C T KIRC 39888071 + 39888051 39888091 41 TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGC TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGT < 41bp 1 0.0280661778442473 1 0.137552589178085 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39888071 chr1:39888091 stopgain 1.000 1 41 hm5C_associated_SNPs_24413 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39888058-39888134
64251 chr7 4796681 4796681 1 + C G KIRC 4796673 + 4796653 4796693 41 ACCGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCT ACCGTTACTTTATCAAAGTCCCACGTTCGCAGGAGGAGCCT < 41bp 1 0.101498388454174 1 0.0330659151077271 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796673 chr7:4796681 synonymous SNV . 0 29 hm5C_associated_SNPs_24414 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:4796670-4796699
64251 chr10 112335137 112335137 1 + A G KIRC 112335144 + 112335124 112335164 41 GTCATCTTCGTCCAGAACAGCGGTTGGCTTTATTGCATGTG GTCATCTTCGTCCGGAACAGCGGTTGGCTTTATTGCATGTG < 41bp 1 0.258451909378425 1 0.190905511379242 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112335144 chr10:112335137 synonymous SNV . 0 14 hm5C_associated_SNPs_24415 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:112335103-112335147
64251 chr19 49469167 49469167 1 + C T KIRC 49469156 + 49469136 49469176 41 ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTA ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGATATCAAGGTA < 41bp 1 0.425865764501637 1 0.235357195138931 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469156 chr19:49469167 synonymous SNV . 0 32 hm5C_associated_SNPs_24416 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr19 49469167 49469167 1 + C T KIRC 49469161 + 49469141 49469181 41 CGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTAACTAG CGTGGCGGCCGCGCTCTCTTCCAGGATATCAAGGTAACTAG < 41bp 1 0.762916254447212 1 0.79034435749054 experiment 0.474167491105576 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469161 chr19:49469167 synonymous SNV . 0 27 hm5C_associated_SNPs_24417 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr10 94109483 94109483 1 + T G KIRC 94109496 + 94109476 94109516 41 CAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTT CAGATCAGGTCTCTGCTACTCGAATCTTGTGTGGAGCCCTT < 41bp 1 0.472464400079859 1 0.508540332317352 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94109496 chr10:94109483 nonsynonymous SNV 0.998 1 8 hm5C_associated_SNPs_24419 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:94109449-94109484
64251 chr6 149691195 149691195 1 + C G KIRC 149691182 + 149691162 149691202 41 TTCAGGTTTTACATGACCTGCGACAAAAATTCCCTGAAGTA TTCAGGTTTTACATGACCTGCGACAAAAATTCCGTGAAGTA < 41bp 1 0.494714490800968 1 0.143286943435669 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAB2 ENSG00000055208 CDS Human protein_coding chr6:149691182 chr6:149691195 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_24420 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:149691173-149691201
64251 chr11 65386188 65386188 1 + G A KIRC 65386204 + 65386184 65386224 41 TCCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG TCCTACTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG < 41bp 1 0.228065998352681 1 0.277491867542267 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386204 chr11:65386188 nonsynonymous SNV 0.996 4 5 hm5C_associated_SNPs_24421 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65386130-65386198
64251 chr3 5215726 5215726 1 + G C KIRC 5215729 + 5215709 5215749 41 TGCTTGGAAACAAGAGAGATCTTCCTAATGCCTTGGATGAG TGCTTGGAAACAAGAGACATCTTCCTAATGCCTTGGATGAG < 41bp 1 0.101357289439933 1 0.0707306265830994 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARL8B ENSG00000134108 CDS Human protein_coding chr3:5215729 chr3:5215726 nonsynonymous SNV 1.000 5 18 hm5C_associated_SNPs_24422 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:5215719-5215730
64251 chr3 10191571 10191571 1 + G T KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCTTGAAGACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.48600033241151 1 0.268844127655029 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191571 synonymous SNV . 0 11 hm5C_associated_SNPs_24423 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr3 10191572 10191572 1 + G T KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCTGTAAGACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.429243208646212 1 0.218339294195175 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191572 stopgain 1.000 1 12 hm5C_associated_SNPs_24424 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr12 104335645 104335645 1 + C T KIRC 104335627 + 104335607 104335647 41 AAGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGCGA AAGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGTGA < 41bp 1 0.319009261129234 1 0.393331229686737 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335627 chr12:104335645 synonymous SNV . 0 39 hm5C_associated_SNPs_24425 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104335617-104335667
64251 chr1 218458677 218458677 1 + G C KIRC 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGCACTCACGTG < 41bp 1 0.316547914993646 1 0.296303927898407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458677 nonsynonymous SNV 0.002 1 32 hm5C_associated_SNPs_24426 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr17 65909128 65909128 1 + A T KIRC 65909116 + 65909096 65909136 41 CTCGTTCAGGTACAGCTCTGCCATCCTATAGAAAATTTGTT CTCGTTCAGGTACAGCTCTGCCATCCTATAGATAATTTGTT < 41bp 1 0.00593686122950979 1 0.0214349925518036 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65909116 chr17:65909128 stopgain 1.000 0 33 hm5C_associated_SNPs_24427 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:65909120-65909140
64251 chr1 24022342 24022342 1 + A T KIRC 24022327 + 24022307 24022347 41 TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCTTTGGG < 41bp 1 0.770634832965359 1 0.472493916749954 experiment 0.458730334069282 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022327 chr1:24022342 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_24428 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:24022108-24022375
64251 chr3 10191593 10191593 1 + A T KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCTGGAAGACCACCCAAATGTGCAGTAAGACCTG < 41bp 1 0.532631395162733 1 0.337643206119537 experiment 0.934737209674533 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191593 stopgain 0.979 1 33 hm5C_associated_SNPs_24430 1 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr5 64082386 64082386 1 + G A KIRC 64082382 + 64082362 64082402 41 TCCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA TCCTTTTGATGACATCATTCCAAGAGAAATTAAAAGGCTGA < 41bp 1 0.568952728841727 1 0.72346693277359 experiment 0.862094542316545 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64082382 chr5:64082386 synonymous SNV . 0 25 hm5C_associated_SNPs_24431 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:64082348-64082392
64251 chr17 57334552 57334552 1 + C T KIRC 57334550 + 57334530 57334570 41 GTTTTTGAGGCCTTTCCTAACACTCCCATTAACATCGATAT GTTTTTGAGGCCTTTCCTAACATTCCCATTAACATCGATAT < 41bp 1 0.0672798090487664 1 0.111685693264008 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GDPD1 ENSG00000153982 CDS Human protein_coding chr17:57334550 chr17:57334552 nonsynonymous SNV 0.984 1 23 hm5C_associated_SNPs_24432 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:57334539-57334566
64251 chr10 75520019 75520019 1 + G A KIRC 75520010 + 75519990 75520030 41 TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC TGGACAGAGTTTTGGAGGGCCCTCAGTGAACCAGCCCAACC < 41bp 1 0.280412903491139 1 0.0991651117801666 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520010 chr10:75520019 nonsynonymous SNV 0.959 0 30 hm5C_associated_SNPs_24434 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:75519988-75520026
64251 chr22 44332970 44332970 1 + C T KIRC 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC CATCCTTAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.603435112826838 1 0.110291212797165 experiment 0.793129774346324 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332970 nonsynonymous SNV 0.001 0 7 hm5C_associated_SNPs_24435 0 0 4 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr2 39008932 39008932 1 + T G KIRC 39008927 + 39008907 39008947 41 CTCTCTGTGTGGCTGGGGTCCTGACTATAGACCCACCATAT CTCTCTGTGTGGCTGGGGTCCTGACGATAGACCCACCATAT < 41bp 1 0.558335105186641 1 0.3218152821064 experiment 0.883329789626719 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008927 chr2:39008932 synonymous SNV . 0 26 hm5C_associated_SNPs_24436 0 0 2 GRWD1 POSTAR2 ENCODE chr2:39008867-39008954
64251 chr2 39008932 39008932 1 + T G KIRC 39008951 + 39008931 39008971 41 CTATAGACCCACCATATGGTCCAGAAAATTGCAGCAGCTCT CGATAGACCCACCATATGGTCCAGAAAATTGCAGCAGCTCT < 41bp 1 0.523371273069181 1 0.200735121965408 experiment 0.953257453861639 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008951 chr2:39008932 synonymous SNV . 0 2 hm5C_associated_SNPs_24437 0 0 2 GRWD1 POSTAR2 ENCODE chr2:39008867-39008954
64251 chr17 16285632 16285632 1 + C T KIRC 16285613 + 16285593 16285633 41 GCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATTC < 41bp 1 0.348107881328048 1 0.0929957032203674 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285613 chr17:16285632 synonymous SNV . 0 40 hm5C_associated_SNPs_24449 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:16285603-16285646
64251 chr3 10191590 10191590 1 + C T KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCTGGAAGACCACCCAAATGTGTAGAAAGACCTG < 41bp 1 0.450540465549694 1 0.102567940950394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191590 stopgain 0.941 0 30 hm5C_associated_SNPs_24450 1 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr12 6493822 6493822 1 + C G KIRC 6493838 + 6493818 6493858 41 AGCACCGCATCTGCTGCTCCCGCTGCCCGCCAGGTGAGAGG AGCAGCGCATCTGCTGCTCCCGCTGCCCGCCAGGTGAGAGG < 41bp 1 0.380791257969082 1 0.183897733688354 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LTBR ENSG00000111321 CDS Human protein_coding chr12:6493838 chr12:6493822 nonsynonymous SNV 0.070 0 5 hm5C_associated_SNPs_24451 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:6493802-6493824
64251 chr18 77475251 77475251 1 + G C KIRC 77475248 + 77475228 77475268 41 CTCATCTACCTGGAGGAGATCCTGGTCCGTGTACACACTGA CTCATCTACCTGGAGGAGATCCTCGTCCGTGTACACACTGA < 41bp 1 0.0620772213822447 1 0.122587382793427 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77475248 chr18:77475251 synonymous SNV . 0 24 hm5C_associated_SNPs_24452 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr18:77475237-77475272
64251 chr17 19237309 19237309 1 + G T KIRC 19237313 + 19237293 19237333 41 TTAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGACACTG TTAACCCTTTCCAGGTTAACCAGCCCCAGCCGCTGACACTG < 41bp 1 0.595556313442573 1 0.489655375480652 experiment 0.808887373114853 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPN2 ENSG00000072134 CDS Human protein_coding chr17:19237313 chr17:19237309 synonymous SNV . 0 17 hm5C_associated_SNPs_24454 0 0 2 PPIG POSTAR2 ENCODE chr17:19237295-19237423
64251 chr7 150772425 150772425 1 + G A KIRC 150772436 + 150772416 150772456 41 CCATGGGCGGCATCTGTGCCCTCTTTGGCCTGCCCTGGTTG CCATGGGCGACATCTGTGCCCTCTTTGGCCTGCCCTGGTTG < 41bp 1 0.205020818785733 1 0.0417695045471191 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772436 chr7:150772425 nonsynonymous SNV 0.963 4 10 hm5C_associated_SNPs_24457 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:150772405-150772431
64251 chr2 32631593 32631593 1 + G A KIRC 32631577 + 32631557 32631597 41 TTGATTTAAGTGATGATTTACTGGAGGATTCAGACAGTGAA TTGATTTAAGTGATGATTTACTGGAGGATTCAGACAATGAA < 41bp 1 0.304024300508274 1 0.502755165100098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32631577 chr2:32631593 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_24458 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32631573-32631609
64251 chr12 113379477 113379477 1 + C T KIRC 113379481 + 113379461 113379501 41 GGACCAGAGGGCCCGCCGTGCAGAGATCCTCAGTGAGATGC GGACCAGAGGGCCCGCTGTGCAGAGATCCTCAGTGAGATGC < 41bp 1 0.689663249440424 1 0.596476674079895 experiment 0.620673501119153 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OAS3 ENSG00000111331 CDS Human protein_coding chr12:113379481 chr12:113379477 nonsynonymous SNV 0.000 1 17 hm5C_associated_SNPs_24459 0 0 1 BUD13 POSTAR2 ENCODE chr12:113379464-113379593
64251 chr10 26994248 26994248 1 + C A KIRC 26994265 + 26994245 26994285 41 ACACAGTGGTGAAAAATACACCGATCCTTTCAAACTCGGTT ACAAAGTGGTGAAAAATACACCGATCCTTTCAAACTCGGTT < 41bp 1 0.223439174465599 1 0.111257880926132 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26994265 chr10:26994248 nonsynonymous SNV 0.946 1 4 hm5C_associated_SNPs_24460 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr10:26994219-26994257
64251 chr8 90937536 90937536 1 + A G KIRC 90937526 + 90937506 90937546 41 CTGAAGGATCAAGGGTGTTACCTAGGCCATAAGTCAAGCCA CTGAAGGATCAAGGGTGTTACCTAGGCCATGAGTCAAGCCA < 41bp 1 0.215168692267639 1 0.146576076745987 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937526 chr8:90937536 nonsynonymous SNV 0.996 1 31 hm5C_associated_SNPs_24461 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:90937523-90937547
64251 chr11 67017906 67017906 1 + C T KIRC 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCATGCTAC < 41bp 1 0.092566602999075 1 0.119970798492432 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017906 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_24462 0 0 2 METAP2 POSTAR2 ENCODE chr11:67017864-67017974
64251 chr1 171756896 171756896 1 + G A KIRC 171756878 + 171756858 171756898 41 TCTGGTTGTACCTTCAGGTCCCCTTTCTGTCTGTGGGTGGG TCTGGTTGTACCTTCAGGTCCCCTTTCTGTCTGTGGGTAGG < 41bp 1 0.0641499132515896 1 0.0141966640949249 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171756878 chr1:171756896 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_24463 0 0 3 DDX24 POSTAR2 ENCODE chr1:171756893-171756948
64251 chr6 109484145 109484145 1 + G T KIRC 109484132 + 109484112 109484152 41 CAATACGAGTTCATAATCTTCAAATGAAATTGAGAAGAGAT CAATACGAGTTCATAATCTTCAAATGAAATTGATAAGAGAT < 41bp 1 0.25823479944016 1 0.457535445690155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57L1 ENSG00000183137 CDS Human protein_coding chr6:109484132 chr6:109484145 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_24464 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:109484141-109484171
64251 chr17 37681093 37681093 1 + C T KIRC 37681077 + 37681057 37681097 41 ACTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTCAGCC ACTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTTAGCC < 41bp 1 0.340956655929301 1 0.403229922056198 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37681077 chr17:37681093 stopgain 0.996 1 37 hm5C_associated_SNPs_24465 0 0 3 GRWD1 POSTAR2 ENCODE chr17:37681009-37681097
64251 chr19 1913029 1913029 1 + C G KIRC 1913048 + 1913028 1913068 41 TCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC TGGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC < 41bp 1 0.229939893051744 1 0.0792292058467865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913048 chr19:1913029 nonsynonymous SNV 0.047 0 2 hm5C_associated_SNPs_24473 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr19:1913001-1913029
64251 chr19 1913030 1913030 1 + G T KIRC 1913048 + 1913028 1913068 41 TCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC TCTCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC < 41bp 1 0.278208702595532 1 0.106430888175964 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913048 chr19:1913030 synonymous SNV . 0 3 hm5C_associated_SNPs_24474 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334287 chr19:1913012-1913030
64251 chr21 45736400 45736400 1 + G A KIRC 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCAGA < 41bp 1 0.372815602201313 1 0.252724230289459 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736400 nonsynonymous SNV 0.689 5 39 hm5C_associated_SNPs_24475 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736400 45736400 1 + G A KIRC 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCAGATC < 41bp 1 0.0757374825055676 1 0.0883206725120544 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736400 nonsynonymous SNV 0.689 5 37 hm5C_associated_SNPs_24476 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736400 45736400 1 + G A KIRC 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCAGATCC < 41bp 1 0.073185315028227 1 0.0757906138896942 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736400 nonsynonymous SNV 0.689 5 36 hm5C_associated_SNPs_24477 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736400 45736400 1 + G A KIRC 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCAGATCCT < 41bp 1 0.35002351965199 1 0.325504958629608 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736400 nonsynonymous SNV 0.689 5 35 hm5C_associated_SNPs_24478 0 0 9 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr6 7580989 7580989 1 + G A KIRC 7580985 + 7580965 7581005 41 GCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAAC GCAGAAAGCAAACAGTAGTGCGACAGAGACAATAAACAAAC < 41bp 1 0.650057539516972 1 0.570357024669647 experiment 0.699884920966056 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7580985 chr6:7580989 synonymous SNV . 0 25 hm5C_associated_SNPs_24479 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7580979-7581020
64251 chr1 249212354 249212354 1 + A C KIRC 249212364 + 249212344 249212384 41 GCCTGTGTGTATCTGGAGAGCAATGCTGACACAACATCTCA GCCTGTGTGTCTCTGGAGAGCAATGCTGACACAACATCTCA < 41bp 1 0.437282204257554 1 0.134767860174179 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212364 chr1:249212354 nonsynonymous SNV 0.768 2 11 hm5C_associated_SNPs_24480 0 0 1 RBM15 POSTAR2 ENCODE chr1:249212328-249212363
64251 chr12 53685805 53685805 1 + T C KIRC 53685807 + 53685787 53685827 41 GGGAAAGCATGCCCAGCCTCCAAGCACTGCCTGTCACCCGG GGGAAAGCATGCCCAGCCCCCAAGCACTGCCTGTCACCCGG < 41bp 1 0.326430264780642 1 0.454618752002716 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53685807 chr12:53685805 nonsynonymous SNV 0.928 4 19 hm5C_associated_SNPs_24485 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr12:53685805-53685806
64251 chr2 61336340 61336340 1 + G C KIRC 61336344 + 61336324 61336364 41 TAACTTAGAAACAACAGTCACTGTTTTCAGAAGAAGAAGAA TAACTTAGAAACAACACTCACTGTTTTCAGAAGAAGAAGAA < 41bp 1 0.100906821038059 1 0.0709719955921173 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIAA1841 ENSG00000162929 CDS Human protein_coding chr2:61336344 chr2:61336340 nonsynonymous SNV 0.892 4 17 hm5C_associated_SNPs_24487 0 0 2 BUD13 POSTAR2 ENCODE chr2:61336330-61336435
64251 chr8 145735861 145735861 1 + C A KIRC 145735855 + 145735835 145735875 41 GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT GTGGTCTGCTCCATCGCTGGCTCCTCACTGGGTGGGACCTT < 41bp 1 0.269319085902985 1 0.0613039135932922 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735855 chr8:145735861 synonymous SNV . 0 27 hm5C_associated_SNPs_24488 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr8 145735861 145735861 1 + C A KIRC 145735858 + 145735838 145735878 41 GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT GTCTGCTCCATCGCTGGCTCCTCACTGGGTGGGACCTTGCT < 41bp 1 0.147475765664536 1 0.183699458837509 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735858 chr8:145735861 synonymous SNV . 0 24 hm5C_associated_SNPs_24489 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr20 62373331 62373331 1 + T A KIRC 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTGACCAGTCCTCACCGTCCACCCCGTCACC < 41bp 1 0.138852344295956 1 0.056773841381073 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373331 synonymous SNV . 0 24 hm5C_associated_SNPs_24490 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr14 35761756 35761756 1 + T C KIRC 35761743 + 35761723 35761763 41 CCATTTTTTCACCCGAGGGTCGGCTCTACCAAGTAGGTGAG CCATTTTTTCACCCGAGGGTCGGCTCTACCAAGCAGGTGAG < 41bp 1 0.378486562476442 1 0.182581543922424 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PSMA6 ENSG00000100902 CDS Human protein_coding chr14:35761743 chr14:35761756 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_24492 0 0 6 DDX3X POSTAR2 ENCODE chr14:35761722-35761759
64251 chr8 104438314 104438314 1 + A G KIRC 104438295 + 104438275 104438315 41 TATTTCTAGGTTGGTGATGACAAAACTGTGAAGCAGTGGAA TATTTCTAGGTTGGTGATGACAAAACTGTGAAGCAGTGGGA < 41bp 1 0.612647031768385 1 0.505901634693146 experiment 0.774705936463229 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438295 chr8:104438314 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_24493 0 0 1 SF3B4 POSTAR2 ENCODE chr8:104438236-104438328
64251 chr8 104438314 104438314 1 + A G KIRC 104438308 + 104438288 104438328 41 GTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCA GTGATGACAAAACTGTGAAGCAGTGGGAAATGGATGGGCCA < 41bp 1 0.424191249927372 1 0.539426386356354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438308 chr8:104438314 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_24494 0 0 1 SF3B4 POSTAR2 ENCODE chr8:104438236-104438328
64251 chr8 104438314 104438314 1 + A G KIRC 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGGAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC < 41bp 1 0.535740767052279 1 0.398322969675064 experiment 0.928518465895442 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438314 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_24495 0 0 1 SF3B4 POSTAR2 ENCODE chr8:104438236-104438328
64251 chr17 4800542 4800542 1 + A C KIRC 4800528 + 4800508 4800548 41 GCCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACTTCAT GCCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTCCTTCAT < 41bp 1 0.600378724753829 1 0.367748826742172 experiment 0.799242550492343 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800528 chr17:4800542 nonsynonymous SNV 1.000 5 35 hm5C_associated_SNPs_24496 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:4800538-4800560
64251 chr17 4800542 4800542 1 + A C KIRC 4800531 + 4800511 4800551 41 TCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGAC TCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTCCTTCATGAC < 41bp 1 0.129293966716447 1 0.371016412973404 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800531 chr17:4800542 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_24497 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:4800538-4800560
64251 chr17 59161835 59161835 1 + C G KIRC 59161840 + 59161820 59161860 41 CATTGCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCAT CATTGCAGGATCCAGGCAGTCCGCTCTGACCCCGTCAGCAT < 41bp 1 0.29642758233638 1 0.158336400985718 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59161840 chr17:59161835 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_24498 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:59161820-59161850
64251 chr2 62934347 62934347 1 + A G KIRC 62934334 + 62934314 62934354 41 TTGACTGATCATCATGGCTTCAGTTTGGAAGAGACTGCAGC TTGACTGATCATCATGGCTTCAGTTTGGAAGAGGCTGCAGC < 41bp 1 0.116811537938613 1 0.0460072755813599 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1 ENSG00000115504 CDS Human protein_coding chr2:62934334 chr2:62934347 synonymous SNV . 0 34 hm5C_associated_SNPs_24499 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:62934273-62934347
64251 chr3 10191563 10191563 1 + G T KIRC 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACTAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.562452367214569 1 0.347251236438751 experiment 0.875095265570862 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191563 stopgain 0.867 1 3 hm5C_associated_SNPs_24501 1 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr17 37360863 37360863 1 + A T KIRC 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCTTCA < 41bp 1 0.303567567799894 1 0.253100156784058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360863 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_24502 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr17 37360863 37360863 1 + A T KIRC 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGCCAAGAAGGAGGAGATCTTCAAGACTTTATCCAAGGA < 41bp 1 0.526723648229797 1 0.212976187467575 experiment 0.946552703540407 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360863 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_24503 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr17 37360863 37360863 1 + A T KIRC 37360876 + 37360856 37360896 41 GGAGATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA GGAGATCTTCAAGACTTTATCCAAGGAGGAAGAGACCAAGA < 41bp 1 0.51562382429696 1 0.908617794513702 experiment 0.968752351406081 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360876 chr17:37360863 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_24504 0 0 52 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr9 80915578 80915578 1 + G T KIRC 80915575 + 80915555 80915595 41 AAGGAGTTGGCATTAGTGTTCTTGGTAAGATTTACTTTTGA AAGGAGTTGGCATTAGTGTTCTTTGTAAGATTTACTTTTGA < 41bp 1 0.131040962010975 1 0.272375226020813 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80915575 chr9:80915578 stopgain 0.995 1 24 hm5C_associated_SNPs_24505 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80915515-80915611
64251 chr19 35749930 35749930 1 + G A KIRC 35749925 + 35749905 35749945 41 CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC CCGTGGTCTCAGCCCAGGACCTCCAAGGGAACAATGAGGCC < 41bp 1 0.725476928834811 1 0.901782751083374 experiment 0.549046142330379 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35749925 chr19:35749930 synonymous SNV . 0 26 hm5C_associated_SNPs_24506 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:35749897-35749933
64251 chr20 46256718 46256718 1 + A T KIRC 46256733 + 46256713 46256753 41 GAAAGAACATTTCCATCAAACCCTGAGAGCTTTATTACCAG GAAAGTACATTTCCATCAAACCCTGAGAGCTTTATTACCAG < 41bp 1 0.12220628282613 1 0.170586556196213 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46256733 chr20:46256718 nonsynonymous SNV 0.881 4 6 hm5C_associated_SNPs_24507 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:46256683-46256719
64251 chr5 65350483 65350483 1 + G A KIRC 65350481 + 65350461 65350501 41 ATCATACAGAGAGTTCCACTCAGCGGGAAGAACTCCTCCAA ATCATACAGAGAGTTCCACTCAACGGGAAGAACTCCTCCAA < 41bp 1 0.770753602029087 1 0.898836433887482 experiment 0.458492795941827 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERBIN ENSG00000112851 CDS Human protein_coding chr5:65350481 chr5:65350483 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_24508 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65350427-65350528
64251 chr15 64448267 64448267 1 - G A KIRC 64448264 - 64448244 64448284 41 GTGATCATCGCAGACTGCGGCAAGATCGAGGTGGAGAAGCC GTGATCATCGCAGACTGTGGCAAGATCGAGGTGGAGAAGCC < 41bp 1 0.791600047536664 1 0.80081307888031 experiment 0.416799904926673 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448264 chr15:64448267 synonymous SNV . 0 18 hm5C_associated_SNPs_24509 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448267 64448267 1 - G A KIRC 64448270 - 64448250 64448290 41 AAGGATGTGATCATCGCAGACTGCGGCAAGATCGAGGTGGA AAGGATGTGATCATCGCAGACTGTGGCAAGATCGAGGTGGA < 41bp 1 0.495824389059014 1 0.334411561489105 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPIB ENSG00000166794 CDS Human protein_coding chr15:64448270 chr15:64448267 synonymous SNV . 0 24 hm5C_associated_SNPs_24510 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448267 64448267 1 - G A KIRC 64448276 - 64448256 64448296 41 CCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGATCGA CCCCTGAAGGATGTGATCATCGCAGACTGTGGCAAGATCGA < 41bp 1 0.682241964282321 1 0.545965909957886 experiment 0.635516071435357 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448276 chr15:64448267 synonymous SNV . 0 30 hm5C_associated_SNPs_24511 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448267 64448267 1 - G A KIRC 64448279 - 64448259 64448299 41 AAACCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGAT AAACCCCTGAAGGATGTGATCATCGCAGACTGTGGCAAGAT < 41bp 1 0.412459849313763 1 0.0365983843803406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448279 chr15:64448267 synonymous SNV . 0 33 hm5C_associated_SNPs_24512 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448268 64448268 1 - C T KIRC 64448264 - 64448244 64448284 41 GTGATCATCGCAGACTGCGGCAAGATCGAGGTGGAGAAGCC GTGATCATCGCAGACTACGGCAAGATCGAGGTGGAGAAGCC < 41bp 1 0.753208066662241 1 0.480468392372131 experiment 0.493583866675517 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448264 chr15:64448268 nonsynonymous SNV 0.934 2 17 hm5C_associated_SNPs_24513 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448268 64448268 1 - C T KIRC 64448270 - 64448250 64448290 41 AAGGATGTGATCATCGCAGACTGCGGCAAGATCGAGGTGGA AAGGATGTGATCATCGCAGACTACGGCAAGATCGAGGTGGA < 41bp 1 0.592861425248335 1 0.259901285171509 experiment 0.814277149503331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPIB ENSG00000166794 CDS Human protein_coding chr15:64448270 chr15:64448268 nonsynonymous SNV 0.934 2 23 hm5C_associated_SNPs_24514 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448268 64448268 1 - C T KIRC 64448276 - 64448256 64448296 41 CCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGATCGA CCCCTGAAGGATGTGATCATCGCAGACTACGGCAAGATCGA < 41bp 1 0.70772184681778 1 0.618352174758911 experiment 0.58455630636444 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448276 chr15:64448268 nonsynonymous SNV 0.934 2 29 hm5C_associated_SNPs_24515 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr15 64448268 64448268 1 - C T KIRC 64448279 - 64448259 64448299 41 AAACCCCTGAAGGATGTGATCATCGCAGACTGCGGCAAGAT AAACCCCTGAAGGATGTGATCATCGCAGACTACGGCAAGAT < 41bp 1 0.396237203308394 1 0.051296591758728 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448279 chr15:64448268 nonsynonymous SNV 0.934 2 32 hm5C_associated_SNPs_24516 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:64448230-64448298
64251 chr7 138944050 138944050 1 + A G KIRC 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAGGCGGAAGCGGAAAGAGGAAGGGGAAAAG < 41bp 1 0.591281417887649 1 0.641478538513184 experiment 0.817437164224702 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944050 nonsynonymous SNV 0.997 2 13 hm5C_associated_SNPs_24517 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr2 29006790 29006790 1 + C A KIRC 29006781 + 29006761 29006801 41 TTTTATTTATAGGATTGTCACCAGACCTGCAATCTATGGAG TTTTATTTATAGGATTGTCACCAGACCTGAAATCTATGGAG < 41bp 1 0.559922568334875 1 0.70201176404953 experiment 0.88015486333025 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1CB ENSG00000213639 CDS Human protein_coding chr2:29006781 chr2:29006790 nonsynonymous SNV 0.997 2 30 hm5C_associated_SNPs_24518 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:29006772-29006798
64251 chr12 51449970 51449970 1 + T G KIRC 51449969 + 51449949 51449989 41 CAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTAAC CAATACATGATATCTTGGCTCGGAGAGAGTGTTTCTCTAAC < 41bp 1 0.647243546939397 1 0.545406341552734 experiment 0.705512906121206 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449969 chr12:51449970 nonsynonymous SNV 0.147 3 22 hm5C_associated_SNPs_24519 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:51449952-51449980
64251 chr1 155029456 155029456 1 + G T KIRC 155029461 + 155029441 155029481 41 AGCATCCTGGGAGTCGCCTCCTCCATAGCCCATGAGTTGGG AGCATCCTGGGAGTCTCCTCCTCCATAGCCCATGAGTTGGG < 41bp 1 0.798807634945763 1 0.98270171880722 experiment 0.402384730108474 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155029461 chr1:155029456 nonsynonymous SNV 0.459 3 16 hm5C_associated_SNPs_24520 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155029431-155029469
64251 chr11 763815 763815 1 + G T KIRC 763823 + 763803 763843 41 ATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAA ATTGTCATGGGCTCCTCCTTCCGCAACACGGGCGAGATCAA < 41bp 1 0.736368408618511 1 0.749642431735992 experiment 0.527263182762979 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:763823 chr11:763815 nonsynonymous SNV 0.999 5 13 hm5C_associated_SNPs_24521 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:763796-763828
64251 chr11 70201752 70201752 1 + G T KIRC 70201745 + 70201725 70201765 41 TCCGTTTTCTTTCCTCGAAGCTCCACAGGCTCCCAGGATGG TCCGTTTTCTTTCCTCGAAGCTCCACATGCTCCCAGGATGG < 41bp 1 0.475998768301955 1 0.655317425727844 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70201745 chr11:70201752 nonsynonymous SNV 0.999 2 28 hm5C_associated_SNPs_24522 0 0 1 UCHL5 POSTAR2 ENCODE chr11:70201748-70201804
64251 chr3 41275110 41275110 1 + A G KIRC 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGCTGGAATTCTTTCTGACCTCACTTGCAAT < 41bp 1 0.103065333790202 1 0.102388143539429 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275110 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_24523 0 0 27 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr1 113240981 113240981 1 + C A KIRC 113240962 + 113240942 113240982 41 AAAGATGAGCGTGAAGGCAACAGCCCATCCTTCTTCAACCC AAAGATGAGCGTGAAGGCAACAGCCCATCCTTCTTCAACAC < 41bp 1 0.221679863398065 1 0.443131506443024 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113240962 chr1:113240981 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_24524 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:113240958-113240989
64251 chr9 139228923 139228923 1 + G C KIRC 139228915 + 139228895 139228935 41 TCTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGG TCTGCACAGGATGGAGGCGTCCTGCCTACAGCTGGCGCTGG < 41bp 1 0.14743600698188 1 0.0742316246032715 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228915 chr9:139228923 nonsynonymous SNV 0.853 2 29 hm5C_associated_SNPs_24536 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr9 139228923 139228923 1 + G C KIRC 139228916 + 139228896 139228936 41 CTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGGA CTGCACAGGATGGAGGCGTCCTGCCTACAGCTGGCGCTGGA < 41bp 1 0.461696078336466 1 0.109604388475418 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228916 chr9:139228923 nonsynonymous SNV 0.853 2 28 hm5C_associated_SNPs_24537 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr5 145858117 145858117 1 + A G KIRC 145858103 + 145858083 145858123 41 GGTCTTCTTTTATAATCCCACCACTCGTCTTTCTATGTGGG GGTCTTCTTTTATAATCCCACCACTCGTCTTTCTGTGTGGG < 41bp 1 0.0785328615178042 1 0.0871165096759796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145858103 chr5:145858117 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_24538 0 0 29 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:145858060-145858120
64251 chr12 95694240 95694240 1 + C T KIRC 95694232 + 95694212 95694252 41 AGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCA AGCAGATGGAAGTGGTCTGACCACTGCCTCTCCAACTCCCA < 41bp 1 0.352194784696781 1 0.208152651786804 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95694232 chr12:95694240 nonsynonymous SNV 0.056 0 29 hm5C_associated_SNPs_24545 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:95694220-95694240
64251 chr2 128185973 128185973 1 + C A KIRC 128185991 + 128185971 128186011 41 GACCTGGACATCAAGGAGGTCTTCGTCCACCCCAACTACAG GAACTGGACATCAAGGAGGTCTTCGTCCACCCCAACTACAG < 41bp 1 0.242039918619063 1 0.059495747089386 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128185991 chr2:128185973 nonsynonymous SNV 0.462 2 3 hm5C_associated_SNPs_24546 0 0 2 SND1 POSTAR2 ENCODE chr2:128185945-128185974
64251 chr17 41154776 41154776 1 + A G KIRC 41154768 + 41154748 41154788 41 CCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAA CCTGCTCTTAAACGCAAGGCCCGACGGGGGGCCAAGGTCAA < 41bp 1 0.273332075225015 1 0.306369721889496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154768 chr17:41154776 nonsynonymous SNV 0.964 1 29 hm5C_associated_SNPs_24550 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41154687-41154789
64251 chr17 41154776 41154776 1 + A G KIRC 41154779 + 41154759 41154799 41 ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGA ACGCAAGGCCCGACGGGGGGCCAAGGTCAAGTTTGAAGAGA < 41bp 1 0.393923432925941 1 0.375125110149384 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154779 chr17:41154776 nonsynonymous SNV 0.964 1 18 hm5C_associated_SNPs_24551 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41154687-41154789
64251 chrX 7171308 7171308 1 + A G KIRC 7171312 + 7171292 7171332 41 GCAGCATCAAGGCCGAACATCATCCTGGTGATGGCTGACGA GCAGCATCAAGGCCGAGCATCATCCTGGTGATGGCTGACGA < 41bp 1 0.246227485573662 1 0.0750560760498047 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STS ENSG00000101846 CDS Human protein_coding chrX:7171312 chrX:7171308 nonsynonymous SNV 0.167 5 17 hm5C_associated_SNPs_24552 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:7171300-7171320
64251 chr17 37360793 37360793 1 + C T KIRC 37360781 + 37360761 37360801 41 TTCTCTTCCCTGACCAGTGACCAGGCTGAGGCCCGCAGGTC TTCTCTTCCCTGACCAGTGACCAGGCTGAGGCTCGCAGGTC < 41bp 1 0.47241880323071 1 0.149629026651382 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360781 chr17:37360793 synonymous SNV . 0 33 hm5C_associated_SNPs_24563 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360793 37360793 1 + C T KIRC 37360796 + 37360776 37360816 41 AGTGACCAGGCTGAGGCCCGCAGGTCTAAGACCAAGGAAGC AGTGACCAGGCTGAGGCTCGCAGGTCTAAGACCAAGGAAGC < 41bp 1 0.790780921046035 1 0.747076272964478 experiment 0.418438157907931 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360796 chr17:37360793 synonymous SNV . 0 18 hm5C_associated_SNPs_24564 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360793 37360793 1 + C T KIRC 37360801 + 37360781 37360821 41 CCAGGCTGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCA CCAGGCTGAGGCTCGCAGGTCTAAGACCAAGGAAGCACGCA < 41bp 1 0.477116191748092 1 0.295085310935974 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360801 chr17:37360793 synonymous SNV . 0 13 hm5C_associated_SNPs_24565 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360793 37360793 1 + C T KIRC 37360807 + 37360787 37360827 41 TGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCC TGAGGCTCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCC < 41bp 1 0.507619541857937 1 0.497065484523773 experiment 0.984760916284125 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360807 chr17:37360793 synonymous SNV . 0 7 hm5C_associated_SNPs_24566 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360793 37360793 1 + C T KIRC 37360808 + 37360788 37360828 41 GAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCCG GAGGCTCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCCG < 41bp 1 0.783037603988275 1 0.804110705852509 experiment 0.43392479202345 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360808 chr17:37360793 synonymous SNV . 0 6 hm5C_associated_SNPs_24567 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:37360780-37360800
64251 chr17 37360846 37360846 1 + C T KIRC 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGTCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA < 41bp 1 0.490614257770311 1 0.122806131839752 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360846 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_24568 0 0 34 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr11 65827424 65827424 1 + C T KIRC 65827410 + 65827390 65827430 41 CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGCCAGACT CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGTCAGACT < 41bp 1 0.172835741656097 1 0.0702197551727295 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827410 chr11:65827424 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_24586 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65827403-65827449
64251 chr17 38610249 38610249 1 + C T KIRC 38610248 + 38610228 38610268 41 GCCGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT GCCGCTTCACAGAGCCGCACCTACGAGGACCTCTACATCAT < 41bp 1 0.581919501726288 1 0.162535011768341 experiment 0.836160996547424 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610248 chr17:38610249 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_24600 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38610240-38610260
64251 chr8 48874107 48874107 1 + T A KIRC 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATCTCCCTCACAGAGACGTAGAGGCGA < 41bp 1 0.260547590004434 1 0.0882163345813751 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874107 synonymous SNV . 0 24 hm5C_associated_SNPs_24601 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:48874080-48874140
64251 chr9 103002449 103002449 1 + C T KIRC 103002451 + 103002431 103002471 41 CGTGGTTGATGTCTTGACCTCATATGAAAGCTGCAATATAA CGTGGTTGATGTCTTGACTTCATATGAAAGCTGCAATATAA < 41bp 1 0.143983986158047 1 0.370405077934265 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control INVS ENSG00000119509 CDS Human protein_coding chr9:103002451 chr9:103002449 synonymous SNV . 0 19 hm5C_associated_SNPs_24602 0 0 1 EIF3H POSTAR2 ENCODE chr9:103002362-103002462
64251 chr6 52943655 52943655 1 + T C KIRC 52943668 + 52943648 52943688 41 AGATTACTTATACCCGGTCTCCAGATGGTGATGGCGTTGGA AGATTACCTATACCCGGTCTCCAGATGGTGATGGCGTTGGA < 41bp 1 0.577715266168115 1 0.756308615207672 experiment 0.84456946766377 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52943668 chr6:52943655 synonymous SNV . 0 8 hm5C_associated_SNPs_24604 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:52943602-52943690
64251 chr10 104129688 104129688 1 + G T KIRC 104129695 + 104129675 104129715 41 GTCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCA GTCTAGTGTTCGGTGCCCATCCACTGAAAACCAAGAGGCCA < 41bp 1 0.179458913618639 1 0.546637654304504 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129695 chr10:104129688 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_24606 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr10 104129688 104129688 1 + G T KIRC 104129696 + 104129676 104129716 41 TCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCAA TCTAGTGTTCGGTGCCCATCCACTGAAAACCAAGAGGCCAA < 41bp 1 0.489373625811941 1 0.67913681268692 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129696 chr10:104129688 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_24607 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr12 56863103 56863103 1 + G A KIRC 56863112 + 56863092 56863132 41 GATCGTTCCTGGGTGTTCACCTATGCCCAGCGCAAGTGGTA GATCGTTCCTGAGTGTTCACCTATGCCCAGCGCAAGTGGTA < 41bp 1 0.30213292193864 1 0.0915474593639374 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863112 chr12:56863103 stopgain 1.000 1 12 hm5C_associated_SNPs_24608 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:56863077-56863108
64251 chr1 11333752 11333752 1 + C A KIRC 11333762 + 11333742 11333782 41 GCCCTGAGGCCCTGGAGCTTCAGTGCCTCACTCACACCGGT GCCCTGAGGCACTGGAGCTTCAGTGCCTCACTCACACCGGT < 41bp 1 0.598382830679391 1 0.852461099624634 experiment 0.803234338641219 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11333762 chr1:11333752 nonsynonymous SNV 1.000 5 11 hm5C_associated_SNPs_24609 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:11333719-11333757
64251 chr6 144876009 144876009 1 + A T KIRC 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCTAA < 41bp 1 0.235226559528031 1 0.371474087238312 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144876009 stopgain 0.989 0 39 hm5C_associated_SNPs_24610 0 0 1 GRWD1 POSTAR2 ENCODE chr6:144875978-144876011
64251 chr21 45534126 45534126 1 + C T KIRC 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGCACCACTTCCACTTCAAGGGCTTTGTGCACAG < 41bp 1 0.779632826802676 1 0.730739057064056 experiment 0.440734346394649 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534126 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_24611 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45534100-45534136
64251 chr14 73550237 73550237 1 + A G KIRC 73550235 + 73550215 73550255 41 TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGAAAGCTT TTTTGAGCTGGAAGAGAGTACAGGGTGCTTCCGGAAAGCTT < 41bp 1 0.682192563830159 1 0.762013792991638 experiment 0.635614872339681 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73550235 chr14:73550237 synonymous SNV . 0 23 hm5C_associated_SNPs_24624 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr14:73550202-73550238
64251 chr20 60701436 60701436 1 + A G KIRC 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTGCGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC < 41bp 1 0.749932800151705 1 0.705635666847229 experiment 0.50013439969659 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701436 nonsynonymous SNV 0.880 4 9 hm5C_associated_SNPs_24625 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr20:60701435-60701436
64251 chrX 107807142 107807142 1 + C A KIRC 107807137 + 107807117 107807157 41 TGATGGAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG TGATGGAATTCCAGGGCCACCAGGAACAAAAGGAATCAGAG < 41bp 1 0.554610943688621 1 0.643687844276428 experiment 0.890778112622759 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107807137 chrX:107807142 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_24626 0 0 4 BUD13 POSTAR2 ENCODE chrX:107807116-107807157
64251 chr13 99098974 99098974 1 + T C KIRC 99098975 + 99098955 99098995 41 CTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGA CTACTCGCTCACCATCCCCCCTGAGTCCGAGAACATCCAGA < 41bp 1 0.180412235709921 1 0.0391455888748169 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098975 chr13:99098974 nonsynonymous SNV 0.958 1 20 hm5C_associated_SNPs_24627 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr13 99098974 99098974 1 + T C KIRC 99098981 + 99098961 99099001 41 GCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACT GCTCACCATCCCCCCTGAGTCCGAGAACATCCAGAAAGACT < 41bp 1 0.156948396964846 1 0.459299325942993 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99098981 chr13:99098974 nonsynonymous SNV 0.958 1 14 hm5C_associated_SNPs_24628 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:99098937-99098979
64251 chr19 35501012 35501012 1 + G T KIRC 35501031 + 35501011 35501051 41 TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT TTCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT < 41bp 1 0.690521015420358 1 0.725491523742676 experiment 0.618957969159284 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501031 chr19:35501012 synonymous SNV . 0 2 hm5C_associated_SNPs_24630 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35500995-35501019
64251 chr1 180849261 180849261 1 + T C KIRC 180849252 + 180849232 180849272 41 TCCGCCTGGAGAATGAACATCTGAATAACTGTGGTGAATTC TCCGCCTGGAGAATGAACATCTGAATAACCGTGGTGAATTC < 41bp 1 0.69682199537784 1 0.446247935295105 experiment 0.606356009244321 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180849252 chr1:180849261 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_24632 0 0 6 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:180849212-180849262
64251 chr5 54456043 54456043 1 + C T KIRC 54456062 + 54456042 54456082 41 CCGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT CTGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT < 41bp 1 0.482128155912895 1 0.488584518432617 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456062 chr5:54456043 nonsynonymous SNV 0.987 4 2 hm5C_associated_SNPs_24633 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:54456018-54456058
64251 chr22 29695794 29695794 1 + G A KIRC 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAAATGGGAG < 41bp 1 0.392844523390184 1 0.189939498901367 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695794 synonymous SNV . 0 34 hm5C_associated_SNPs_24636 0 0 43 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:29695775-29695796
64251 chr1 171759689 171759689 1 + G T KIRC 171759671 + 171759651 171759691 41 CCTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACCTGTG CCTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACCTTTG < 41bp 1 0.327125099567261 1 0.0300736427307129 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171759671 chr1:171759689 synonymous SNV . 0 39 hm5C_associated_SNPs_24637 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:171759681-171759696
64251 chr5 176084597 176084597 1 + G A KIRC 176084617 + 176084597 176084637 41 GCAGAACTCTCTGACTGGGGCCCCTGGCCCGGCCCCACCCA ACAGAACTCTCTGACTGGGGCCCCTGGCCCGGCCCCACCCA < 41bp 1 0.388173362129912 1 0.0933266282081604 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176084617 chr5:176084597 synonymous SNV . 0 1 hm5C_associated_SNPs_24649 0 0 1 RBM15 POSTAR2 ENCODE chr5:176084565-176084623
64251 chr20 44050027 44050027 1 + C T KIRC 44050042 + 44050022 44050062 41 GAGGCCCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACGT GAGGCTCCCCCAGTGCCCTTCCTGCATGCCCAGCGGTACGT < 41bp 1 0.1267752047336 1 0.0927641093730927 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44050042 chr20:44050027 synonymous SNV . 0 6 hm5C_associated_SNPs_24650 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44050025-44050054
64251 chr2 27663740 27663740 1 + C T KIRC 27663756 + 27663736 27663776 41 GTGACATCACCTGTCGTGCCCCCCTCTGTCAAGACTCCGAC GTGATATCACCTGTCGTGCCCCCCTCTGTCAAGACTCCGAC < 41bp 1 0.2351258689689 1 0.0165746212005615 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27663756 chr2:27663740 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_24651 0 0 1 RPS3 POSTAR2 ENCODE chr2:27663676-27663745
64251 chr11 12243299 12243299 1 + G A KIRC 12243280 + 12243260 12243300 41 AAGAGCTGGAACCAGGGCACCCCTCCCCTGGAGCTGCTGGC AAGAGCTGGAACCAGGGCACCCCTCCCCTGGAGCTGCTGAC < 41bp 1 0.0377378424401761 1 0.123589396476746 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12243280 chr11:12243299 nonsynonymous SNV 0.962 4 40 hm5C_associated_SNPs_24654 0 0 1 FXR2 POSTAR2 ENCODE chr11:12243252-12243305
64251 chr17 18793149 18793149 1 + G T KIRC 18793154 + 18793134 18793174 41 GATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTC GATCCCAGATTACAGTAATGCAGTAATCGTGGCCAAGTCTC < 41bp 1 0.70947060672414 1 0.18475079536438 experiment 0.58105878655172 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18793154 chr17:18793149 stopgain 1.000 1 16 hm5C_associated_SNPs_24656 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18793134-18793170
64251 chr20 62366744 62366744 1 + G A KIRC 62366763 + 62366743 62366783 41 GGCCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGGAGCA GACCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGGAGCA < 41bp 1 0.398165786161075 1 0.767495036125183 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62366763 chr20:62366744 nonsynonymous SNV 0.015 0 2 hm5C_associated_SNPs_24657 0 0 5 GEMIN5 POSTAR2 ENCODE chr20:62366698-62366748
64251 chr8 22037969 22037969 1 + G A KIRC 22037952 + 22037932 22037972 41 ACCCCAATGGCTACTCTGCTCACATGCACTGCGTGTGGCGC ACCCCAATGGCTACTCTGCTCACATGCACTGCGTGTGACGC < 41bp 1 0.385044750930085 1 0.124210387468338 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22037952 chr8:22037969 stopgain 0.991 0 38 hm5C_associated_SNPs_24658 0 0 1 DDX24 POSTAR2 ENCODE chr8:22037968-22037994
64251 chr11 61897770 61897770 1 + C A KIRC 61897785 + 61897765 61897805 41 AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC AAGCTAAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC < 41bp 1 0.437418701557871 1 0.225680261850357 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897785 chr11:61897770 synonymous SNV . 0 6 hm5C_associated_SNPs_24660 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:61897760-61897780
64251 chr1 228459673 228459673 1 + C T KIRC 228459666 + 228459646 228459686 41 AAGGAGCAGGTGGTGTTTGCCAAGGATCAGCCGGTGCACAG AAGGAGCAGGTGGTGTTTGCCAAGGATTAGCCGGTGCACAG < 41bp 1 0.245162421190846 1 0.917844235897064 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228459666 chr1:228459673 stopgain 0.015 0 28 hm5C_associated_SNPs_24661 0 0 1 DDX24 POSTAR2 ENCODE chr1:228459625-228459746
64251 chr4 980873 980873 1 + A G KIRC 980893 + 980873 980913 41 ATGCGTCCCCTGCGCCCCCGCGCCGCGCTGCTGGCGCTCCT GTGCGTCCCCTGCGCCCCCGCGCCGCGCTGCTGGCGCTCCT < 41bp 1 0.694554762889317 1 0.894270539283752 experiment 0.610890474221366 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control IDUA ENSG00000127415 CDS Human protein_coding chr4:980893 chr4:980873 nonsynonymous SNV 0.011 2 1 hm5C_associated_SNPs_24665 0 0 1 GEMIN5 POSTAR2 ENCODE chr4:980832-980898
64251 chr19 1043790 1043790 1 + C G KIRC 1043784 + 1043764 1043804 41 TCCGGGAGGTGTGGGAGATGCTGGGACCCCGGATCTTCACC TCCGGGAGGTGTGGGAGATGCTGGGAGCCCGGATCTTCACC < 41bp 1 0.783728976360559 1 0.841580092906952 experiment 0.432542047278882 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043784 chr19:1043790 nonsynonymous SNV 0.700 3 27 hm5C_associated_SNPs_24666 0 0 2 DDX24 POSTAR2 ENCODE chr19:1043755-1043841
64251 chr19 35501023 35501023 1 + T G KIRC 35501031 + 35501011 35501051 41 TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT TGCAGCGTGAGAGCCTGCTCCAGGGCCGCCTCTACCTCTCT < 41bp 1 0.738419350744206 1 0.901587605476379 experiment 0.523161298511589 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501031 chr19:35501023 nonsynonymous SNV 0.996 5 13 hm5C_associated_SNPs_24667 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:35501000-35501038
64251 chr6 117037431 117037431 1 + G A KIRC 117037411 + 117037391 117037431 41 AAATTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGG AAATTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGA < 41bp 1 0.549242728144356 1 0.416763424873352 experiment 0.901514543711287 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117037411 chr6:117037431 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_24668 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:117037419-117037439
64251 chr19 34959981 34959981 1 + A C KIRC 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACGTTCTCATAGTTGATTCAGCTGAAGAAGATTCTTCAA < 41bp 1 0.532812400694078 1 0.293211877346039 experiment 0.934375198611844 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959981 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_24669 0 0 1 TRA2A POSTAR2 ENCODE chr19:34959965-34960066
64251 chr15 40866065 40866065 1 + C G KIRC 40866080 + 40866060 40866100 41 GGGACCTGGTAGCAGAGCACCAGGCCAAACAGAGCCTGGAT GGGACGTGGTAGCAGAGCACCAGGCCAAACAGAGCCTGGAT < 41bp 1 0.444493989912428 1 0.88140594959259 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40866080 chr15:40866065 nonsynonymous SNV 0.872 4 6 hm5C_associated_SNPs_24670 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40866055-40866076
64251 chr20 37632409 37632409 1 + T A KIRC 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTAGTGTCGATGCTCATCGAGCAGGCTCGAGCACT < 41bp 1 0.329288676467224 1 0.0361090898513794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632409 synonymous SNV . 0 9 hm5C_associated_SNPs_24671 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr20:37632392-37632412
64251 chr17 71232490 71232490 1 + T G KIRC 71232491 + 71232471 71232511 41 ATGAGCTCATTAGGTAAAATCCAAGTCATGGAGAAACAAGA ATGAGCTCATTAGGTAAAAGCCAAGTCATGGAGAAACAAGA < 41bp 1 0.137624282162017 1 0.143935918807983 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232491 chr17:71232490 nonsynonymous SNV 0.014 0 20 hm5C_associated_SNPs_24672 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232486-71232497
64251 chr16 19548885 19548885 1 + A G KIRC 19548865 + 19548845 19548885 41 AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATG < 41bp 1 0.41444847765882 1 0.259268641471863 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548865 chr16:19548885 nonsynonymous SNV 0.991 0 41 hm5C_associated_SNPs_24673 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:19548885-19548909
64251 chr14 39645318 39645318 1 + T C KIRC 39645306 + 39645286 39645326 41 ATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGG ATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCCGGTGGAGG < 41bp 1 0.0239480909394246 1 0.0192565321922302 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39645306 chr14:39645318 synonymous SNV . 0 33 hm5C_associated_SNPs_24674 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39645280-39645320
64251 chr9 134354737 134354737 1 + T G KIRC 134354717 + 134354697 134354737 41 AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCT AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCG < 41bp 1 0.367558775675558 1 0.812266707420349 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354717 chr9:134354737 synonymous SNV . 0 41 hm5C_associated_SNPs_24675 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr9 134354737 134354737 1 + T G KIRC 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGACCGTGCCGGGCAGCAGCCTGGGCACTGAGATCTG < 41bp 1 0.278912999871026 1 0.509276628494263 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354737 synonymous SNV . 0 15 hm5C_associated_SNPs_24676 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr8 28906483 28906483 1 + T A KIRC 28906477 + 28906457 28906497 41 TGCTTTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGA TGCTTTTTTCGAAGAAGCAGCAATCCAGGAGAGTCATGGGA < 41bp 1 0.0346286519571393 1 0.198637098073959 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906477 chr8:28906483 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_24677 0 0 9 DGCR8 POSTAR2 ENCODE chr8:28906473-28906524
64251 chr8 28906483 28906483 1 + T A KIRC 28906481 + 28906461 28906501 41 TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGATAGA TTTTTCGAAGAAGCAGCAATCCAGGAGAGTCATGGGATAGA < 41bp 1 0.430601540845215 1 0.869272470474243 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906481 chr8:28906483 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_24678 0 0 9 DGCR8 POSTAR2 ENCODE chr8:28906473-28906524
64251 chr14 102901086 102901086 1 + C T KIRC 102901100 + 102901080 102901120 41 CCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCCTCAGCT CCCCCTTCTGAACTCACTCACTGTGCCTTCCAGCCTCAGCT < 41bp 1 0.133620859577967 1 0.368309080600739 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102901100 chr14:102901086 synonymous SNV . 0 7 hm5C_associated_SNPs_24680 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102901065-102901086
64251 chr10 98743198 98743198 1 + T G KIRC 98743202 + 98743182 98743222 41 GAGGCTGTGAATGAGGTAGACAACGAAAACACCCAGCAGAA GAGGCTGTGAATGAGGGAGACAACGAAAACACCCAGCAGAA < 41bp 1 0.667070780340145 1 0.496883362531662 experiment 0.66585843931971 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LCOR ENSG00000155640 CDS Human other chr10:98743202 chr10:98743198 nonsynonymous SNV 0.016 0 17 hm5C_associated_SNPs_24681 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:98743188-98743225
64251 chr11 608408 608408 1 + C T KIRC 608425 + 608405 608445 41 AGTCGTGGAGCTCAGGCCCCCTTCCCGGTCCCGCTCCACAT AGTTGTGGAGCTCAGGCCCCCTTCCCGGTCCCGCTCCACAT < 41bp 1 0.145224378042927 1 0.124066919088364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608425 chr11:608408 synonymous SNV . 0 4 hm5C_associated_SNPs_24682 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:608407-608445
64251 chr17 30694855 30694855 1 + C A KIRC 30694868 + 30694848 30694888 41 CCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCCTGC CCTGCAAAAACTACAGAACCCCCAAAGCCTACATTCCCTGC < 41bp 1 0.550669397392317 1 0.134352713823318 experiment 0.898661205215365 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694868 chr17:30694855 nonsynonymous SNV 0.995 3 8 hm5C_associated_SNPs_24683 0 0 18 U2AF2 POSTAR2 GSE83923,CSM2221659 chr17:30694820-30694860
64251 chr3 150264590 150264590 1 + A G KIRC 150264597 + 150264577 150264617 41 TTTCCGGGACAACATGGCGCCGTCCACGCCGCTCTTGACAG TTTCCGGGACAACGTGGCGCCGTCCACGCCGCTCTTGACAG < 41bp 1 0.244103420537657 1 0.327436029911041 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150264597 chr3:150264590 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_24684 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150264589-150264613
64251 chr1 36755101 36755101 1 + C T KIRC 36755116 + 36755096 36755136 41 GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA GGAGTTTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA < 41bp 1 0.46831755694214 1 0.365886211395264 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755116 chr1:36755101 nonsynonymous SNV 0.946 1 6 hm5C_associated_SNPs_24685 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:36755074-36755103
64251 chr5 179025775 179025775 1 + T G KIRC 179025776 + 179025756 179025796 41 ACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGC ACAGCACGAGAAAGACACTGCCTCTCTACTCAGGATGGAGC < 41bp 1 0.0299102955379555 1 0.0825672447681427 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179025776 chr5:179025775 nonsynonymous SNV 0.000 0 20 hm5C_associated_SNPs_24689 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:179025760-179025780
64251 chr1 145295521 145295521 1 + C T KIRC 145295523 + 145295503 145295543 41 CTGAAGCAAGCTGAGGAGCTCAGGTGAGGGGACCCCATAGG CTGAAGCAAGCTGAGGAGTTCAGGTGAGGGGACCCCATAGG < 41bp 1 0.315294039398425 1 0.613961756229401 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NBPF10 ENSG00000163386 CDS Human other chr1:145295523 chr1:145295521 nonsynonymous SNV 0.072 0 19 hm5C_associated_SNPs_24690 0 0 1 PRPF8 POSTAR2 ENCODE chr1:145295510-145295567
64251 chr10 51580556 51580556 1 + G T KIRC 51580558 + 51580538 51580578 41 CATGTATGTGTTTCCTAGGTCAAAGCTCAGATTCACAGTTG CATGTATGTGTTTCCTAGTTCAAAGCTCAGATTCACAGTTG < 41bp 1 0.380062500083853 1 0.21131244301796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NCOA4 ENSG00000138293 CDS Human other chr10:51580558 chr10:51580556 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_24691 0 0 3 SF3B4 POSTAR2 ENCODE chr10:51580509-51580572
64251 chr5 179193074 179193074 1 + C G KIRC 179193078 + 179193058 179193098 41 CACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACC CACCTCTGGTCAGCCCGGGGCGGACAATCCCAGTCCAAACC < 41bp 1 0.10879585013967 1 0.289301723241806 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAML1 ENSG00000161021 CDS Human protein_coding chr5:179193078 chr5:179193074 nonsynonymous SNV 0.015 0 17 hm5C_associated_SNPs_24692 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:179193020-179193099
64251 chr7 128407619 128407619 1 + G T KIRC 128407599 + 128407579 128407619 41 TTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAAG TTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAAT < 41bp 1 0.785527863331138 1 0.415343582630157 experiment 0.428944273337724 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407599 chr7:128407619 nonsynonymous SNV 0.998 2 41 hm5C_associated_SNPs_24693 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:128407527-128407653
64251 chr1 145509177 145509177 1 + G T KIRC 145509172 + 145509152 145509192 41 TTCTTTTTCCCTAGAGGTGGCCGAAGACGCAGCAGAAGTCC TTCTTTTTCCCTAGAGGTGGCCGAATACGCAGCAGAAGTCC < 41bp 1 0.182698646705946 1 0.196975648403168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM8A ENSG00000131795 CDS Human other chr1:145509172 chr1:145509177 nonsynonymous SNV . 0 26 hm5C_associated_SNPs_24695 0 0 8 BUD13 POSTAR2 ENCODE chr1:145509154-145509200
64251 chr1 145509177 145509177 1 + G T KIRC 145509191 + 145509171 145509211 41 GCCGAAGACGCAGCAGAAGTCCAGACCGGAGACGTCGCTGA GCCGAATACGCAGCAGAAGTCCAGACCGGAGACGTCGCTGA < 41bp 1 0.328045224211442 1 0.212762981653214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM8A ENSG00000131795 CDS Human other chr1:145509191 chr1:145509177 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_24696 0 0 8 BUD13 POSTAR2 ENCODE chr1:145509154-145509200
64251 chr11 73638349 73638349 1 + A T KIRC 73638335 + 73638315 73638355 41 ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCTA ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCTGATCTA < 41bp 1 0.668309647148447 1 0.869242072105408 experiment 0.663380705703105 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73638335 chr11:73638349 nonsynonymous SNV 0.997 1 35 hm5C_associated_SNPs_24697 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73638338-73638376
64251 chr7 101813771 101813771 1 + C A KIRC 101813790 + 101813770 101813810 41 GCTCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA GATCTCATCGGCCAATCACTCCCTCCAGCTGGCCTCACAGA < 41bp 1 0.0464627629564133 1 0.594947576522827 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101813790 chr7:101813771 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_24740 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:101813761-101813784
64251 chr14 65511120 65511120 1 + C T KIRC 65511109 + 65511089 65511129 41 CTGGTGGATGGCTGCTACTCCTTCTGGCAGGCGGGGCTCCT CTGGTGGATGGCTGCTACTCCTTCTGGCAGGTGGGGCTCCT < 41bp 1 0.470003593721967 1 0.0307300388813019 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65511109 chr14:65511120 nonsynonymous SNV 0.986 3 32 hm5C_associated_SNPs_24741 0 0 1 RPS3 POSTAR2 ENCODE chr14:65511104-65511151
64251 chr1 16058448 16058448 1 + A C KIRC 16058464 + 16058444 16058484 41 GGTCATTCTCTCCGACCGGCCCTGCCTGGAGCTAAGTGCCG GGTCCTTCTCTCCGACCGGCCCTGCCTGGAGCTAAGTGCCG < 41bp 1 0.0624927432212068 1 0.046809583902359 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16058464 chr1:16058448 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_24742 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:16058434-16058458
64251 chr3 31658488 31658488 1 + G C KIRC 31658471 + 31658451 31658491 41 TCTTGCAGTATCTGAGAGACCGATTAACAAAACAAGAGTTC TCTTGCAGTATCTGAGAGACCGATTAACAAAACAAGACTTC < 41bp 1 0.310051398687645 1 0.35896897315979 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31658471 chr3:31658488 nonsynonymous SNV 0.996 1 38 hm5C_associated_SNPs_24743 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:31658444-31658489
64251 chr5 176863471 176863471 1 + T G KIRC 176863468 + 176863448 176863488 41 GAGGTGAAGGAGCACCCCCTCTTTAAGAAGCTGAACTTCAA GAGGTGAAGGAGCACCCCCTCTTGAAGAAGCTGAACTTCAA < 41bp 1 0.709351687384545 1 0.628624618053436 experiment 0.58129662523091 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863468 chr5:176863471 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_24744 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:176863447-176863473
64251 chr4 79420893 79420893 1 + A C KIRC 79420912 + 79420892 79420932 41 GAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGA GCAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGA < 41bp 1 0.234453714863027 1 0.770354747772217 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79420912 chr4:79420893 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_24745 0 0 1 EIF3H POSTAR2 ENCODE chr4:79420887-79420932
64251 chr19 804177 804177 1 + C A KIRC 804178 + 804158 804198 41 CTGCCCTTTGGGAAGGTCACCAACCTCCTGATGCTGAAGGG CTGCCCTTTGGGAAGGTCAACAACCTCCTGATGCTGAAGGG < 41bp 1 0.245272934957628 1 0.108772069215775 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804178 chr19:804177 nonsynonymous SNV 0.989 4 20 hm5C_associated_SNPs_24746 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:804140-804180
64251 chr19 36221724 36221724 1 + C G KIRC 36221735 + 36221715 36221755 41 TGGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAGCCCC TGGAGGCTGGAGAGGAGAACCAGACCATTGTGCACAGCCCC < 41bp 1 0.189155024014438 1 0.789258539676666 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36221735 chr19:36221724 nonsynonymous SNV 0.996 2 10 hm5C_associated_SNPs_24748 0 0 2 SRSF1 POSTAR2 ENCODE chr19:36221663-36221725
64251 chr7 150840457 150840457 1 + A G KIRC 150840477 + 150840457 150840497 41 AGTATGAACAGAAGCTCTTCCTGGCCCCACTGCCAAGCTCA GGTATGAACAGAAGCTCTTCCTGGCCCCACTGCCAAGCTCA < 41bp 1 0.386721745839713 1 0.247497797012329 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150840477 chr7:150840457 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_24757 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr7:150840438-150840464
64251 chr17 53014035 53014035 1 + T C KIRC 53014053 + 53014033 53014073 41 TTTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA TTCTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA < 41bp 1 0.648782756185046 1 0.613574624061584 experiment 0.702434487629909 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014053 chr17:53014035 synonymous SNV . 0 3 hm5C_associated_SNPs_24760 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:53014007-53014039
64251 chr10 75520026 75520026 1 + C T KIRC 75520010 + 75519990 75520030 41 TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCTAACC < 41bp 1 0.240928368478529 1 0.055112898349762 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520010 chr10:75520026 synonymous SNV . 0 37 hm5C_associated_SNPs_24761 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:75519988-75520026
64251 chr19 3533330 3533330 1 + C A KIRC 3533341 + 3533321 3533361 41 GATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCA GATCCTTGTATGGAAGTACCCCTCCCTGACCCAGGTGGCCA < 41bp 1 0.0894063095562136 1 0.0446474254131317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3533341 chr19:3533330 synonymous SNV . 0 10 hm5C_associated_SNPs_24762 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:3533329-3533330
64251 chr22 32188047 32188047 1 + T C KIRC 32188034 + 32188014 32188054 41 CTTAGGAGAAGAACTGTAGTCATGAAGTGACAGTGGTCCTG CTTAGGAGAAGAACTGTAGTCATGAAGTGACAGCGGTCCTG < 41bp 1 0.592175246889081 1 0.326352715492249 experiment 0.815649506221838 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32188034 chr22:32188047 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_24763 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:32188036-32188049
64251 chr6 30692126 30692126 1 + C A KIRC 30692122 + 30692102 30692142 41 GTATCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGG GTATCAGCAGTACCAGGATGCCACAGCAGAAGAGGAGGAGG < 41bp 1 0.307890085970292 1 0.407739996910095 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692122 chr6:30692126 synonymous SNV . 0 25 hm5C_associated_SNPs_24764 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr6 30692126 30692126 1 + C A KIRC 30692125 + 30692105 30692145 41 TCAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATT TCAGCAGTACCAGGATGCCACAGCAGAAGAGGAGGAGGATT < 41bp 1 0.701974591191247 1 0.622076988220215 experiment 0.596050817617505 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TUBB ENSG00000196230 CDS Human protein_coding chr6:30692125 chr6:30692126 synonymous SNV . 0 22 hm5C_associated_SNPs_24765 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:30692120-30692160
64251 chr17 46135809 46135809 1 + C T KIRC 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACTTTTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT < 41bp 1 0.782508160897504 1 0.807512164115906 experiment 0.434983678204992 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135809 synonymous SNV . 0 6 hm5C_associated_SNPs_24766 0 0 21 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr12 71977609 71977609 1 + G T KIRC 71977616 + 71977596 71977636 41 GAACATGCTCACGGGAGTCTCCAGTGCCGTGCTGGCTGGTG GAACATGCTCACGTGAGTCTCCAGTGCCGTGCTGGCTGGTG < 41bp 1 0.376529001832534 1 0.553492426872253 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977616 chr12:71977609 stopgain 0.006 1 14 hm5C_associated_SNPs_24770 0 0 2 RPS3 POSTAR2 ENCODE chr12:71977579-71977616
64251 chr17 18137246 18137246 1 + C T KIRC 18137229 + 18137209 18137249 41 GCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCA GCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGTGCA < 41bp 1 0.715317709662108 1 0.471333622932434 experiment 0.569364580675784 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18137229 chr17:18137246 nonsynonymous SNV 0.009 1 38 hm5C_associated_SNPs_24771 0 0 1 PPIG POSTAR2 ENCODE chr17:18137185-18137253
64251 chr17 18137246 18137246 1 + C T KIRC 18137230 + 18137210 18137250 41 CTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAG CTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGTGCAG < 41bp 1 0.41552445038197 1 0.717115581035614 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18137230 chr17:18137246 nonsynonymous SNV 0.009 1 37 hm5C_associated_SNPs_24772 0 0 1 PPIG POSTAR2 ENCODE chr17:18137185-18137253
64251 chr17 18137246 18137246 1 + C T KIRC 18137231 + 18137211 18137251 41 TCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGG TCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGTGCAGG < 41bp 1 0.361382008046193 1 0.790323615074158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18137231 chr17:18137246 nonsynonymous SNV 0.009 1 36 hm5C_associated_SNPs_24773 0 0 1 PPIG POSTAR2 ENCODE chr17:18137185-18137253
64251 chr17 18137246 18137246 1 + C T KIRC 18137232 + 18137212 18137252 41 CGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGGT CGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGTGCAGGT < 41bp 1 0.525912748230883 1 0.818464636802673 experiment 0.948174503538234 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18137232 chr17:18137246 nonsynonymous SNV 0.009 1 35 hm5C_associated_SNPs_24774 0 0 1 PPIG POSTAR2 ENCODE chr17:18137185-18137253
64251 chr20 44045300 44045300 1 + G A KIRC 44045286 + 44045266 44045306 41 GGGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGT GGGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAAAGCTGT < 41bp 1 0.598667391959998 1 0.0901285111904144 experiment 0.802665216080005 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045286 chr20:44045300 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_24775 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045300 44045300 1 + G A KIRC 44045287 + 44045267 44045307 41 GGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTG GGGCCACCCTTCCTGCAGGCCCCATCAGGTGCAAAGCTGTG < 41bp 1 0.179393519611595 1 0.0513637065887451 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045287 chr20:44045300 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_24776 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045300 44045300 1 + G A KIRC 44045288 + 44045268 44045308 41 GGCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTGG GGCCACCCTTCCTGCAGGCCCCATCAGGTGCAAAGCTGTGG < 41bp 1 0.124481738249787 1 0.120395392179489 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045288 chr20:44045300 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_24777 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr20 44045300 44045300 1 + G A KIRC 44045289 + 44045269 44045309 41 GCCACCCTTCCTGCAGGCCCCATCAGGTGCAGAGCTGTGGG GCCACCCTTCCTGCAGGCCCCATCAGGTGCAAAGCTGTGGG < 41bp 1 0.679779711318067 1 0.182470738887787 experiment 0.640440577363866 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PIGT ENSG00000124155 CDS Human protein_coding chr20:44045289 chr20:44045300 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_24778 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44045269-44045302
64251 chr4 178262698 178262698 1 + C T KIRC 178262712 + 178262692 178262732 41 TCAGTGCCACTGCAGAATAACTGTGTGCCGCTTTGGGGACA TCAGTGTCACTGCAGAATAACTGTGTGCCGCTTTGGGGACA < 41bp 1 0.537372794896597 1 0.0660403668880463 experiment 0.925254410206805 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262712 chr4:178262698 synonymous SNV . 0 7 hm5C_associated_SNPs_24779 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:178262693-178262707
64251 chr15 45003781 45003781 1 + C T KIRC 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTCGCGCTATTCTCTCTTTCTGGCCTGGAGGCTATC < 41bp 1 0.125930013018081 1 0.0447560250759125 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003781 nonsynonymous SNV 0.001 0 15 hm5C_associated_SNPs_24780 0 0 41 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr1 16257994 16257994 1 + T C KIRC 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCCGACAG < 41bp 1 0.292056050477986 1 0.104187041521072 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257994 synonymous SNV . 0 36 hm5C_associated_SNPs_24782 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16257920-16258020
64251 chr1 16257995 16257995 1 + G A KIRC 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTAACAG < 41bp 1 0.220574878928435 1 0.115243256092072 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257995 nonsynonymous SNV 0.008 0 37 hm5C_associated_SNPs_24783 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16257920-16258020
64251 chr5 139946853 139946853 1 + T C KIRC 139946837 + 139946817 139946857 41 GATGCTACTCCTATCCACTGCCATGTACGGTGCCCATGCCC GATGCTACTCCTATCCACTGCCATGTACGGTGCCCACGCCC < 41bp 1 0.221533768005058 1 0.31523522734642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139946837 chr5:139946853 synonymous SNV . 0 37 hm5C_associated_SNPs_24784 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:139946841-139946871
64251 chr12 57548478 57548478 1 + C T KIRC 57548481 + 57548461 57548501 41 CAGACCATCATCCAGGGCATCCTGGTGAGGGAGCTACTGTC CAGACCATCATCCAGGGTATCCTGGTGAGGGAGCTACTGTC < 41bp 1 0.0978864737412048 1 0.138855069875717 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57548481 chr12:57548478 synonymous SNV . 0 18 hm5C_associated_SNPs_24785 0 0 4 EIF3H POSTAR2 ENCODE chr12:57548443-57548479
64251 chr16 30990969 30990969 1 + C A KIRC 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCGGACGAGGCCGAGAGCCCTAGGCCCCTGCT < 41bp 1 0.706865885355401 1 0.852370142936707 experiment 0.586268229289198 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990969 nonsynonymous SNV 0.010 2 25 hm5C_associated_SNPs_24786 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:30990952-30990990
64251 chr6 27806755 27806755 1 + G A KIRP 27806746 + 27806726 27806766 41 AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG AGACGGCCGTGCGCCTGCTGCTGCCAGGGAAGCTGGCCAAG < 41bp 1 0.625247926302723 1 0.0955115854740143 experiment 0.749504147394553 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806746 chr6:27806755 nonsynonymous SNV 0.992 1 30 hm5C_associated_SNPs_24787 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806700-27806760
64251 chr1 173454563 173454563 1 + A G KIRP 173454543 + 173454523 173454563 41 AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATA AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATG < 41bp 1 0.0766763796075918 1 0.016430526971817 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454543 chr1:173454563 nonsynonymous SNV 0.581 0 41 hm5C_associated_SNPs_24788 0 0 23 RTCB POSTAR2 GSE38201,GSM936508 chr1:173454542-173454568
64251 chr17 37358657 37358657 1 + C T KIRP 37358663 + 37358643 37358683 41 ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA ATGCCGGAAAAACATCTTGGCCCGCCGGAAGGGCAGGCACA < 41bp 1 0.217751989190561 1 0.0335198640823364 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358663 chr17:37358657 nonsynonymous SNV 0.995 1 15 hm5C_associated_SNPs_24790 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358657 37358657 1 + C T KIRP 37358664 + 37358644 37358684 41 TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT TGCCGGAAAAACATCTTGGCCCGCCGGAAGGGCAGGCACAT < 41bp 1 0.23137398462548 1 0.0945356488227844 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358664 chr17:37358657 nonsynonymous SNV 0.995 1 14 hm5C_associated_SNPs_24791 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358657 37358657 1 + C T KIRP 37358665 + 37358645 37358685 41 GCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATG GCCGGAAAAACATCTTGGCCCGCCGGAAGGGCAGGCACATG < 41bp 1 0.762386634826766 1 0.0868091285228729 experiment 0.475226730346467 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358665 chr17:37358657 nonsynonymous SNV 0.995 1 13 hm5C_associated_SNPs_24792 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358657 37358657 1 + C T KIRP 37358667 + 37358647 37358687 41 CGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGG CGGAAAAACATCTTGGCCCGCCGGAAGGGCAGGCACATGGG < 41bp 1 0.773861128074265 1 0.411776602268219 experiment 0.452277743851469 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358667 chr17:37358657 nonsynonymous SNV 0.995 1 11 hm5C_associated_SNPs_24793 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr1 2066777 2066777 1 + C T KIRP 2066765 + 2066745 2066785 41 CGTGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAG CGTGCCAACGGCCACCTCTTCCAAGCCAAGCGTTTTAACAG < 41bp 1 0.274217872120941 1 0.215989232063293 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2066765 chr1:2066777 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_24794 0 0 1 PPIG POSTAR2 ENCODE chr1:2066700-2066804
64251 chr6 29910554 29910554 1 + T G KIRP 29910541 + 29910521 29910561 41 TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCTTCAC TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATGTCTTCAC < 41bp 1 0.666264930180055 1 0.986725211143494 experiment 0.66747013963989 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910541 chr6:29910554 nonsynonymous SNV 0.048 3 34 hm5C_associated_SNPs_24795 0 0 20 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:29910540-29910560
64251 chr2 235943690 235943690 1 + C T KIRP 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGGCCTCCTTCGCTGCAAGTCAGAGGGGACC < 41bp 1 0.225182496733573 1 0.184947639703751 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943690 nonsynonymous SNV 0.800 1 19 hm5C_associated_SNPs_24796 0 0 3 DDX3X POSTAR2 ENCODE chr2:235943656-235943692
64251 chr3 47374713 47374713 1 + C A KIRP 47374698 + 47374678 47374718 41 ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGCTGCTG ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGATGCTG < 41bp 1 0.286102478203351 1 0.157342433929443 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374698 chr3:47374713 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_24797 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47374689-47374722
64251 chr16 2011289 2011289 1 + A T KIRP 2011269 + 2011249 2011289 41 ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGA ATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGGT < 41bp 1 0.570779159558711 1 0.362411141395569 experiment 0.858441680882578 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011269 chr16:2011289 nonsynonymous SNV 0.952 4 41 hm5C_associated_SNPs_24798 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr16 2011289 2011289 1 + A T KIRP 2011276 + 2011256 2011296 41 GCATGTATGAAGCCGAAATGCAGTGGAAGAGGGACTAGTAC GCATGTATGAAGCCGAAATGCAGTGGAAGAGGGTCTAGTAC < 41bp 1 0.759780239742003 1 0.521542489528656 experiment 0.480439520515993 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011276 chr16:2011289 nonsynonymous SNV 0.952 4 34 hm5C_associated_SNPs_24799 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2011198-2011291
64251 chr8 42977953 42977953 1 + A G KIRP 42977935 + 42977915 42977955 41 GACTCCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA GACTCCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGGGA < 41bp 1 0.300684303260426 1 0.0992777645587921 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POMK ENSG00000185900 CDS Human protein_coding chr8:42977935 chr8:42977953 nonsynonymous SNV 0.141 1 39 hm5C_associated_SNPs_24800 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977840-42978000
64251 chr3 47374712 47374712 1 + G T KIRP 47374698 + 47374678 47374718 41 ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGCTGCTG ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGATCTGCTG < 41bp 1 0.344745138251203 1 0.220090955495834 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374698 chr3:47374712 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_24801 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47374689-47374722
64251 chr22 30038229 30038229 1 + T C KIRP 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CCCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG < 41bp 1 0.690764824367775 1 0.506858289241791 experiment 0.61847035126445 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038229 synonymous SNV . 0 2 hm5C_associated_SNPs_24803 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:30038188-30038240
64251 chr9 96079890 96079890 1 + C T KIRP 96079899 + 96079879 96079919 41 CGGAGCCGCCCCGACCCTGTCCGTGCCCACACCAGGTACTG CGGAGCCGCCCTGACCCTGTCCGTGCCCACACCAGGTACTG < 41bp 1 0.117138970285505 1 0.0827859938144684 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96079899 chr9:96079890 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_24804 0 0 2 BUD13 POSTAR2 ENCODE chr9:96079883-96079906
64251 chr17 65739904 65739904 1 + G A KIRP 65739907 + 65739887 65739927 41 TTGAAGTAAGTTTTCGGGAGCTACAGAAATTAAATCAAGAA TTGAAGTAAGTTTTCGGAAGCTACAGAAATTAAATCAAGAA < 41bp 1 0.5584722006584 1 0.513473331928253 experiment 0.8830555986832 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65739907 chr17:65739904 nonsynonymous SNV 0.997 2 18 hm5C_associated_SNPs_24805 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65739800-65740198
64251 chr22 30038228 30038228 1 + C A KIRP 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG ATCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG < 41bp 1 0.691698926372146 1 0.582861006259918 experiment 0.616602147255708 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038228 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_24806 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:30038188-30038240
64251 chr19 45162149 45162149 1 + C T KIRP 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCATTGT < 41bp 1 0.612688881127462 1 0.296333312988281 experiment 0.774622237745076 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162149 synonymous SNV . 0 38 hm5C_associated_SNPs_24807 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr19 45162149 45162149 1 + C T KIRP 45162140 + 45162120 45162160 41 TCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG TCCAAATGTTCCCGTGAGGTCCTTTGGCATTGTCATCTGTG < 41bp 1 0.0212745875314992 1 0.047462671995163 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162140 chr19:45162149 synonymous SNV . 0 30 hm5C_associated_SNPs_24808 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr9 139734263 139734263 1 + G A KIRP 139734259 + 139734239 139734279 41 GCCTTCAGACTGAAGAATGACTCGGACCTCTTCGGGCTGGG GCCTTCAGACTGAAGAATGACTCGAACCTCTTCGGGCTGGG < 41bp 1 0.796894038608816 1 0.856163024902344 experiment 0.406211922782368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734259 chr9:139734263 nonsynonymous SNV 0.051 4 25 hm5C_associated_SNPs_24809 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734263 139734263 1 + G A KIRP 139734265 + 139734245 139734285 41 AGACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGA AGACTGAAGAATGACTCGAACCTCTTCGGGCTGGGGCTGGA < 41bp 1 0.0703436877647022 1 0.054002434015274 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734265 chr9:139734263 nonsynonymous SNV 0.051 4 19 hm5C_associated_SNPs_24810 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734263 139734263 1 + G A KIRP 139734266 + 139734246 139734286 41 GACTGAAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAG GACTGAAGAATGACTCGAACCTCTTCGGGCTGGGGCTGGAG < 41bp 1 0.154798200022533 1 0.171218246221542 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734266 chr9:139734263 nonsynonymous SNV 0.051 4 18 hm5C_associated_SNPs_24811 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr9 139734263 139734263 1 + G A KIRP 139734271 + 139734251 139734291 41 AAGAATGACTCGGACCTCTTCGGGCTGGGGCTGGAGGAGGC AAGAATGACTCGAACCTCTTCGGGCTGGGGCTGGAGGAGGC < 41bp 1 0.620461602052279 1 0.862050175666809 experiment 0.759076795895441 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734271 chr9:139734263 nonsynonymous SNV 0.051 4 13 hm5C_associated_SNPs_24812 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139734257-139734290
64251 chr11 61111339 61111339 1 + A G KIRP 61111346 + 61111326 61111366 41 AGATGCTGAAACCACTGCAGCAGCCTGGCCTAACGTGGCTG AGATGCTGAAACCGCTGCAGCAGCCTGGCCTAACGTGGCTG < 41bp 1 0.293057303136674 1 0.367790877819061 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61111346 chr11:61111339 nonsynonymous SNV 0.720 0 14 hm5C_associated_SNPs_24814 0 0 6 BUD13 POSTAR2 ENCODE chr11:61111306-61111355
64251 chr16 89627425 89627425 1 + C T KIRP 89627445 + 89627425 89627465 41 CGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGAT TGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGAT < 41bp 1 0.328800986953501 1 0.0766088664531708 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627445 chr16:89627425 nonsynonymous SNV 0.992 3 1 hm5C_associated_SNPs_24815 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr1 957703 957703 1 + C A KIRP 957712 + 957692 957732 41 AACCAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAA AACCAGGTGTCAACTGGGGACACCAGGATCTTCTTTGTGAA < 41bp 1 0.452179543575352 1 0.283409148454666 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957712 chr1:957703 synonymous SNV . 0 12 hm5C_associated_SNPs_24817 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:957703-957704
64251 chr1 957703 957703 1 + C A KIRP 957715 + 957695 957735 41 CAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAACCC CAGGTGTCAACTGGGGACACCAGGATCTTCTTTGTGAACCC < 41bp 1 0.593583622032721 1 0.523652374744415 experiment 0.812832755934558 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957715 chr1:957703 synonymous SNV . 0 9 hm5C_associated_SNPs_24818 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:957703-957704
64251 chr1 223900487 223900487 1 + C A KIRP 223900495 + 223900475 223900515 41 CTCTTCCAGGACCCGTCCTTCCCGGCCATCCCCTCGGCCCT CTCTTCCAGGACACGTCCTTCCCGGCCATCCCCTCGGCCCT < 41bp 1 0.510233827293887 1 0.200605422258377 experiment 0.979532345412225 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223900495 chr1:223900487 nonsynonymous SNV 0.122 1 13 hm5C_associated_SNPs_24819 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr1:223900481-223900514
64251 chr9 131386741 131386741 1 + G A KIRP 131386723 + 131386703 131386743 41 CTGGATGAGAACTCGGCCTTCCTTCAGTTCAACTGGAAGGC CTGGATGAGAACTCGGCCTTCCTTCAGTTCAACTGGAAAGC < 41bp 1 0.0137992253841971 1 0.0473178029060364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131386723 chr9:131386741 synonymous SNV . 0 39 hm5C_associated_SNPs_24820 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr9:131386738-131386762
64251 chr6 31593324 31593324 1 + G A KIRP 31593332 + 31593312 31593352 41 GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC GTCATGATCCCCAGGGTGGGCTACAGCCTTCAGGCCCACCC < 41bp 1 0.613246600207338 1 0.440519005060196 experiment 0.773506799585324 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593332 chr6:31593324 nonsynonymous SNV 0.977 2 13 hm5C_associated_SNPs_24821 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr2 235949726 235949726 1 + C G KIRP 235949741 + 235949721 235949761 41 ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAAC ACATCGCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAAC < 41bp 1 0.212557586294456 1 0.244700580835342 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949741 chr2:235949726 nonsynonymous SNV 0.994 5 6 hm5C_associated_SNPs_24822 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr2 235949726 235949726 1 + C G KIRP 235949744 + 235949724 235949764 41 TCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA TCGCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA < 41bp 1 0.0160637786094412 1 0.0533238053321838 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949744 chr2:235949726 nonsynonymous SNV 0.994 5 3 hm5C_associated_SNPs_24823 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr2 235949726 235949726 1 + C G KIRP 235949745 + 235949725 235949765 41 CCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA CGCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA < 41bp 1 0.0196982057404072 1 0.106580913066864 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949745 chr2:235949726 nonsynonymous SNV 0.994 5 2 hm5C_associated_SNPs_24824 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr2 233428989 233428989 1 + G T KIRP 233428984 + 233428964 233429004 41 AGTTCTGGAGGTTTTATAGCCACATGGTACGTCCTGGGGAC AGTTCTGGAGGTTTTATAGCCACATTGTACGTCCTGGGGAC < 41bp 1 0.707560885577924 1 0.739013135433197 experiment 0.584878228844152 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233428984 chr2:233428989 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_24825 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:233428968-233429006
64251 chr17 57728648 57728648 1 + G T KIRP 57728643 + 57728623 57728663 41 AGTGGATGTCTTCTTTCCTCCAGAAGCACAAAATGATTTTC AGTGGATGTCTTCTTTCCTCCAGAATCACAAAATGATTTTC < 41bp 1 0.474788196486076 1 0.742417931556702 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57728643 chr17:57728648 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_24826 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57728627-57728663
64251 chr4 54244014 54244014 1 + C T KIRP 54244030 + 54244010 54244050 41 CGGCCGGCGAGGTCGAGCGCCTAGTGTCGGAGCTGAGCGGC CGGCTGGCGAGGTCGAGCGCCTAGTGTCGGAGCTGAGCGGC < 41bp 1 0.745322665143661 1 0.448535680770874 experiment 0.509354669712677 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244030 chr4:54244014 synonymous SNV . 0 5 hm5C_associated_SNPs_24827 0 0 4 DDX3X POSTAR2 ENCODE chr4:54243845-54244022
64251 chr3 49737921 49737921 1 + A G KIRP 49737932 + 49737912 49737952 41 AGGTACAAGATTGCCTCAAGCAGTTGATGATGTCTCTGCTT AGGTACAAGGTTGCCTCAAGCAGTTGATGATGTCTCTGCTT < 41bp 1 0.308615236738303 1 0.493201732635498 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49737932 chr3:49737921 nonsynonymous SNV 0.994 0 10 hm5C_associated_SNPs_24828 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:49737907-49737933
64251 chr19 34895341 34895341 1 + G T KIRP 34895331 + 34895311 34895351 41 GTTTTCACCTGGTCGCCCGGCGGCCATGGCGGCCGTTCTGA GTTTTCACCTGGTCGCCCGGCGGCCATGGCTGCCGTTCTGA < 41bp 1 0.580364140425344 1 0.396657824516296 experiment 0.839271719149312 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34895331 chr19:34895341 synonymous SNV . 0 31 hm5C_associated_SNPs_24830 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34895340-34895380
64251 chr17 45682709 45682709 1 + G A KIRP 45682702 + 45682682 45682722 41 GTTTTTTCCTATCCCAGGCTCGAGCTGGAATCATTAGCACT GTTTTTTCCTATCCCAGGCTCGAGCTGAAATCATTAGCACT < 41bp 1 0.189459571370427 1 0.628718912601471 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45682702 chr17:45682709 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_24838 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:45682699-45682726
64251 chr17 45682709 45682709 1 + G A KIRP 45682706 + 45682686 45682726 41 TTTCCTATCCCAGGCTCGAGCTGGAATCATTAGCACTGTAG TTTCCTATCCCAGGCTCGAGCTGAAATCATTAGCACTGTAG < 41bp 1 0.558938439360815 1 0.331201255321503 experiment 0.882123121278371 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45682706 chr17:45682709 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_24839 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:45682699-45682726
64251 chr9 112705604 112705604 1 + A G KIRP 112705590 + 112705570 112705610 41 TGAGCTTGTGTCCGGGAGGCCGGTCTCAGACACCACAGAGC TGAGCTTGTGTCCGGGAGGCCGGTCTCAGACACCGCAGAGC < 41bp 1 0.115673660490744 1 0.395631492137909 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PALM2 ENSG00000157654;ENSG00000243444 CDS Human other chr9:112705590 chr9:112705604 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_24842 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:112705598-112705622
64251 chr5 54635905 54635905 1 + A G KIRP 54635889 + 54635869 54635909 41 CAGCGTGTAATATTTACCAGCCCAATTAAGGCTCTGAGTAA CAGCGTGTAATATTTACCAGCCCAATTAAGGCTCTGGGTAA < 41bp 1 0.376199141976571 1 0.247075617313385 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54635889 chr5:54635905 nonsynonymous SNV 0.996 4 37 hm5C_associated_SNPs_24843 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:54635866-54635989
64251 chr1 40724033 40724033 1 + G C KIRP 40724018 + 40723998 40724038 41 ATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATCT ATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTCTATCT < 41bp 1 0.239232011907652 1 0.0194345712661743 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40724018 chr1:40724033 synonymous SNV . 0 36 hm5C_associated_SNPs_24844 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:40724020-40724040
64251 chr1 155532204 155532204 1 - A T KIRP 155532222 - 155532202 155532242 41 GCTGCTGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCATTTT GCTGCTGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCATATT < 41bp 1 0.714686716352438 1 0.714987874031067 experiment 0.570626567295123 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ASH1L-AS1 ENSG00000235919 ncRNA_exonic Human antisense chr1:155532222 chr1:155532204 . . 0 39 hm5C_associated_SNPs_24845 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:155532203-155532204
64251 chr1 155532204 155532204 1 - A T KIRP 155532223 - 155532203 155532243 41 TGCTGCTGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCATTT TGCTGCTGCCGCCGCCGCCGCCGCCGCTCCCGCCGCCATAT < 41bp 1 0.26660190649625 1 0.261716455221176 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ASH1L-AS1 ENSG00000235919 ncRNA_exonic Human antisense chr1:155532223 chr1:155532204 . . 0 40 hm5C_associated_SNPs_24846 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:155532203-155532204
64251 chr12 57624649 57624649 1 + C G KIRP 57624668 + 57624648 57624688 41 CCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCC CGAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCC < 41bp 1 0.387130128775254 1 0.201165169477463 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57624668 chr12:57624649 nonsynonymous SNV 0.986 0 2 hm5C_associated_SNPs_24847 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57624593-57624658
64251 chr1 10328310 10328310 1 + T C KIRP 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATAATGAGACCAACCTTCCCACTGAGAAGGTAGG < 41bp 1 0.00201730119774735 1 0.0846464335918427 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328310 nonsynonymous SNV 0.975 3 25 hm5C_associated_SNPs_24848 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chr7 104750955 104750955 1 + G T KIRP 104750943 + 104750923 104750963 41 GGGGGAGAATCACCATGTGTCTCATGTTCACCGAGTCATGT GGGGGAGAATCACCATGTGTCTCATGTTCACCTAGTCATGT < 41bp 1 0.331206192811925 1 0.0166846215724945 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2E ENSG00000005483 CDS Human protein_coding chr7:104750943 chr7:104750955 synonymous SNV . 0 33 hm5C_associated_SNPs_24849 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:104750955-104751000
64251 chr16 1370453 1370453 1 + A G KIRP 1370441 + 1370421 1370461 41 TTTTTGTCTCTGGCACAGATCCTATTAGGAATACAGGAACT TTTTTGTCTCTGGCACAGATCCTATTAGGAATGCAGGAACT < 41bp 1 0.0417359821600208 1 0.109252274036407 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2I ENSG00000103275 CDS Human protein_coding chr16:1370441 chr16:1370453 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_24850 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:1370438-1370466
64251 chr1 26150129 26150129 1 + C T KIRP 26150131 + 26150111 26150151 41 GCTGTCTCCGTCTCTTTGCTCCAGACCATCCCAATCTGGCA GCTGTCTCCGTCTCTTTGTTCCAGACCATCCCAATCTGGCA < 41bp 1 0.435188665669279 1 0.760464072227478 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTFR1L ENSG00000117640 UTR5 Human protein_coding chr1:26150131 chr1:26150129 . . 0 19 hm5C_associated_SNPs_24852 0 0 6 BUD13 POSTAR2 ENCODE chr1:26150097-26150166
64251 chr14 102478240 102478240 1 + T C KIRP 102478245 + 102478225 102478265 41 ATCAGATCACCCAGATCAATCATGGCCTGATGATGGTGGGG ATCAGATCACCCAGACCAATCATGGCCTGATGATGGTGGGG < 41bp 1 0.180488733474168 1 0.391990423202515 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478245 chr14:102478240 nonsynonymous SNV 0.998 2 16 hm5C_associated_SNPs_24854 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102478212-102478253
64251 chr14 102478240 102478240 1 + T C KIRP 102478250 + 102478230 102478270 41 ATCACCCAGATCAATCATGGCCTGATGATGGTGGGGCCCTC ATCACCCAGACCAATCATGGCCTGATGATGGTGGGGCCCTC < 41bp 1 0.100599924538722 1 0.0856868326663971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478250 chr14:102478240 nonsynonymous SNV 0.998 2 11 hm5C_associated_SNPs_24855 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102478212-102478253
64251 chr2 233671361 233671361 1 + T A KIRP 233671347 + 233671327 233671367 41 GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCACATATG < 41bp 1 0.104126312421811 1 0.0478638708591461 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671347 chr2:233671361 synonymous SNV . 0 35 hm5C_associated_SNPs_24856 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671348 + 233671328 233671368 41 GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCACATATGG < 41bp 1 0.163366301218404 1 0.166114836931229 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671348 chr2:233671361 synonymous SNV . 0 34 hm5C_associated_SNPs_24857 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671351 + 233671331 233671371 41 TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCACATATGGTAA < 41bp 1 0.11053614073646 1 0.226857453584671 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671351 chr2:233671361 synonymous SNV . 0 31 hm5C_associated_SNPs_24858 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671354 + 233671334 233671374 41 CTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTA CTTTTCTCCAGGTCCAGCTCCCCCTCCACATATGGTAAGTA < 41bp 1 0.0516814948999747 1 0.0693139731884003 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671354 chr2:233671361 synonymous SNV . 0 28 hm5C_associated_SNPs_24859 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671355 + 233671335 233671375 41 TTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTAC TTTTCTCCAGGTCCAGCTCCCCCTCCACATATGGTAAGTAC < 41bp 1 0.0459077844229566 1 0.124967694282532 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671355 chr2:233671361 synonymous SNV . 0 27 hm5C_associated_SNPs_24860 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671356 + 233671336 233671376 41 TTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACC TTTCTCCAGGTCCAGCTCCCCCTCCACATATGGTAAGTACC < 41bp 1 0.0222488951526777 1 0.169059693813324 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671356 chr2:233671361 synonymous SNV . 0 26 hm5C_associated_SNPs_24861 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671361 233671361 1 + T A KIRP 233671357 + 233671337 233671377 41 TTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACCT TTCTCCAGGTCCAGCTCCCCCTCCACATATGGTAAGTACCT < 41bp 1 0.530888348869061 1 0.85325825214386 experiment 0.938223302261878 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671357 chr2:233671361 synonymous SNV . 0 25 hm5C_associated_SNPs_24862 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr10 287963 287963 1 + A G KIRP 287976 + 287956 287996 41 TCCAGATACCTAATCATGAGCTGGTTTGGGCTAAAATGAAA TCCAGATGCCTAATCATGAGCTGGTTTGGGCTAAAATGAAA < 41bp 1 0.496915117126675 1 0.133112162351608 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMYND11 ENSG00000015171 CDS Human protein_coding chr10:287976 chr10:287963 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_24864 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:287961-287978
64251 chr20 49576203 49576203 1 + T G KIRP 49576184 + 49576164 49576204 41 AAATCGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG AAATCGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTGG < 41bp 1 0.13912077593509 1 0.0974138975143433 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576184 chr20:49576203 nonsynonymous SNV 0.713 3 40 hm5C_associated_SNPs_24865 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr20:49576203-49576204
64251 chr1 145761288 145761288 1 + T C KIRP 145761280 + 145761260 145761300 41 CTTCTCTGGAAGTCTCAAGTCCACCAGATACTACAGAGGAA CTTCTCTGGAAGTCTCAAGTCCACCAGACACTACAGAGGAA < 41bp 1 0.0636862305564641 1 0.100508332252502 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDZK1 ENSG00000174827 CDS Human protein_coding chr1:145761280 chr1:145761288 synonymous SNV . 0 29 hm5C_associated_SNPs_24866 0 0 1 GRWD1 POSTAR2 ENCODE chr1:145761217-145761318
64251 chr5 10411600 10411600 1 + G A KIRP 10411587 + 10411567 10411607 41 ATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGGCCTGTT ATGCAGCCCACCAAGCCATACTCCAGCAGGGAGAGCCTGTT < 41bp 1 0.761474952707324 1 0.835305333137512 experiment 0.477050094585353 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411587 chr5:10411600 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_24868 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10411592-10411616
64251 chr5 10411600 10411600 1 + G A KIRP 10411602 + 10411582 10411622 41 CCATACTCCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC CCATACTCCAGCAGGGAGAGCCTGTTGGCTTTCAGCCTTAC < 41bp 1 0.107683609276341 1 0.0536005795001984 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411602 chr5:10411600 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_24869 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10411592-10411616
64251 chr13 61034625 61034625 1 + G A KIRP 61034613 + 61034593 61034633 41 CACCAAGGATGCTGCGATTACAGATGACTGATGGTCATATA CACCAAGGATGCTGCGATTACAGATGACTGATAGTCATATA < 41bp 1 0.680820911071112 1 0.582618713378906 experiment 0.638358177857775 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034613 chr13:61034625 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_24871 0 0 1 BUD13 POSTAR2 ENCODE chr13:61034561-61034638
64251 chr10 104158555 104158555 1 + G A KIRP 104158544 + 104158524 104158564 41 GAAGGCCTTGCCCACCTTCTCCCAGCCCTTCGGGGGTGGCT GAAGGCCTTGCCCACCTTCTCCCAGCCCTTCAGGGGTGGCT < 41bp 1 0.284519589524098 1 0.396022140979767 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104158544 chr10:104158555 nonsynonymous SNV 0.988 4 32 hm5C_associated_SNPs_24872 0 0 2 GRSF1 POSTAR2 ENCODE chr10:104158524-104158622
64251 chr7 55459595 55459595 1 + G C KIRP 55459578 + 55459558 55459598 41 AAGACAGCTGATCCCCATGACTGCTCTGCTTATACTGGCTG AAGACAGCTGATCCCCATGACTGCTCTGCTTATACTGCCTG < 41bp 1 0.336375805148305 1 0.0402646958827972 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55459578 chr7:55459595 nonsynonymous SNV 0.996 5 38 hm5C_associated_SNPs_24873 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:55459562-55459600
64251 chr12 112229114 112229114 1 + G A KIRP 112229119 + 112229099 112229139 41 TTTGCTCACAGGCTGGCTTTCCCCCTGGTGTGGTCAACATT TTTGCTCACAGGCTGACTTTCCCCCTGGTGTGGTCAACATT < 41bp 1 0.18153246562419 1 0.0423107743263245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229119 chr12:112229114 nonsynonymous SNV 0.992 4 16 hm5C_associated_SNPs_24874 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:112229114-112229115
64251 chr11 64802325 64802325 1 + T G KIRP 64802321 + 64802301 64802341 41 TTGTCCTGGGGGCCGTAGGCCGGTTTGAAGCCTCAGTGATC TTGTCCTGGGGGCCGTAGGCCGGTGTGAAGCCTCAGTGATC < 41bp 1 0.578016299391378 1 0.697668015956879 experiment 0.843967401217245 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802321 chr11:64802325 nonsynonymous SNV 0.917 4 25 hm5C_associated_SNPs_24875 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:64802324-64802325
64251 chr12 57922959 57922959 1 + C T KIRP 57922978 + 57922958 57922998 41 CCTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG CTTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG < 41bp 1 0.068610658030982 1 0.122379571199417 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922978 chr12:57922959 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_24879 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:57922940-57922960
64251 chr6 30857025 30857025 1 + G A KIRP 30857005 + 30856985 30857025 41 GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGA < 41bp 1 0.278099681720829 1 0.333623290061951 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30857005 chr6:30857025 nonsynonymous SNV 0.968 4 41 hm5C_associated_SNPs_24880 0 0 4 BUD13 POSTAR2 ENCODE chr6:30856999-30857068
64251 chr6 32947799 32947799 1 + C G KIRP 32947785 + 32947765 32947805 41 ATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCC ATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTGAAACCC < 41bp 1 0.224339114176021 1 0.3067227602005 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32947785 chr6:32947799 stopgain 1.000 1 35 hm5C_associated_SNPs_24882 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32947700-32947820
64251 chr22 46712115 46712115 1 + C T KIRP 46712102 + 46712082 46712122 41 TTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACCCCCCTCA TTTCTGAGCTGGCAGCGGAGCAGCTCACGGCACTCCCCTCA < 41bp 1 0.608384207291678 1 0.349583625793457 experiment 0.783231585416645 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46712102 chr22:46712115 nonsynonymous SNV 0.002 0 34 hm5C_associated_SNPs_24883 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46712096-46712121
64251 chr1 39910503 39910503 1 + G C KIRP 39910486 + 39910466 39910506 41 CAGAAGTGGCATGTGGTCAGCAGTAAGATGGAAGAAAGAAA CAGAAGTGGCATGTGGTCAGCAGTAAGATGGAAGAAACAAA < 41bp 1 0.114808705581961 1 0.415344715118408 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910486 chr1:39910503 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_24884 0 0 3 AARS POSTAR2 ENCODE chr1:39910479-39910507
64251 chr2 45879507 45879507 1 + G C KIRP 45879512 + 45879492 45879532 41 CACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTG CACGATGCCCCCATACGCTACGACGACTTCGTGGCCAACTG < 41bp 1 0.258308545277167 1 0.128979802131653 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCE ENSG00000171132 CDS Human protein_coding chr2:45879512 chr2:45879507 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_24885 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:45879505-45879532
64251 chr17 4800540 4800540 1 + T G KIRP 4800528 + 4800508 4800548 41 GCCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACTTCAT GCCTCAGTCCGCTCTGGGGGCAGCAGCCAAGTGTACTTCAT < 41bp 1 0.526533964273303 1 0.297524511814117 experiment 0.946932071453393 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800528 chr17:4800540 synonymous SNV . 0 33 hm5C_associated_SNPs_24886 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:4800538-4800560
64251 chr17 4800540 4800540 1 + T G KIRP 4800531 + 4800511 4800551 41 TCAGTCCGCTCTGGGGGCAGCAGCCAAGTTTACTTCATGAC TCAGTCCGCTCTGGGGGCAGCAGCCAAGTGTACTTCATGAC < 41bp 1 0.150234892997619 1 0.343157529830933 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800531 chr17:4800540 synonymous SNV . 0 30 hm5C_associated_SNPs_24887 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:4800538-4800560
64251 chr17 694912 694912 1 + A T KIRP 694913 + 694893 694933 41 CGGGTCTATGTGGCTGACAACTGTGGCCTTTATGCCCAGGC CGGGTCTATGTGGCTGACATCTGTGGCCTTTATGCCCAGGC < 41bp 1 0.467692227197348 1 0.530618906021118 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRM3 ENSG00000171861 CDS Human protein_coding chr17:694913 chr17:694912 nonsynonymous SNV 0.996 4 20 hm5C_associated_SNPs_24888 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:694860-694914
64251 chr7 101837159 101837159 1 + G A KIRP 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCACTGGGACA < 41bp 1 0.0186446126197802 1 0.179644852876663 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837159 nonsynonymous SNV 0.883 0 33 hm5C_associated_SNPs_24889 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 101837159 101837159 1 + G A KIRP 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGCACCGTCCGAGGGCACTGGGACAC < 41bp 1 0.0799770780849337 1 0.29236513376236 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837159 nonsynonymous SNV 0.883 0 32 hm5C_associated_SNPs_24890 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr17 26943748 26943748 1 - G C KIRP 26943754 - 26943734 26943774 41 TAGGTAAATGTGGTGCCTCTCACCATCCAGCTGACACACCA TAGGTAAATGTGGTGCCTCTCACCATGCAGCTGACACACCA < 41bp 1 0.733045090975114 1 0.848821818828583 experiment 0.533909818049771 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0100 ENSG00000007202 CDS Human protein_coding chr17:26943754 chr17:26943748 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_24892 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:26943732-26943759
64251 chr17 77077141 77077141 1 + C G KIRP 77077130 + 77077110 77077150 41 AAAGTGGGCAGCTCAAATGGCAAGACGAACTCAACCAGCAC AAAGTGGGCAGCTCAAATGGCAAGACGAACTGAACCAGCAC < 41bp 1 0.674160117192767 1 0.703435242176056 experiment 0.651679765614465 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENGASE ENSG00000167280 CDS Human protein_coding chr17:77077130 chr17:77077141 synonymous SNV . 0 32 hm5C_associated_SNPs_24893 0 0 1 BUD13 POSTAR2 ENCODE chr17:77077126-77077143
64251 chr17 77077140 77077140 1 + T C KIRP 77077130 + 77077110 77077150 41 AAAGTGGGCAGCTCAAATGGCAAGACGAACTCAACCAGCAC AAAGTGGGCAGCTCAAATGGCAAGACGAACCCAACCAGCAC < 41bp 1 0.716372862586253 1 0.630849242210388 experiment 0.567254274827494 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENGASE ENSG00000167280 CDS Human protein_coding chr17:77077130 chr17:77077140 nonsynonymous SNV 0.257 3 31 hm5C_associated_SNPs_24894 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:77077120-77077140
64251 chr17 62223780 62223780 1 + C A KIRP 62223763 + 62223743 62223783 41 GTCAATCTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGG GTCAATCTGCAGCGCTAGAGCATGTGCTTGCGCATAAATGG < 41bp 1 0.554749179579329 1 0.381127506494522 experiment 0.890501640841341 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223763 chr17:62223780 . . 0 38 hm5C_associated_SNPs_24895 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223780 62223780 1 + C A KIRP 62223769 + 62223749 62223789 41 CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC CTGCAGCGCTAGAGCATGTGCTTGCGCATAAATGGGGCCGC < 41bp 1 0.330533949169647 1 0.0931185483932495 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223769 chr17:62223780 . . 0 32 hm5C_associated_SNPs_24896 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223780 62223780 1 + C A KIRP 62223787 + 62223767 62223807 41 TGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG TGCTTGCGCATAAATGGGGCCGCCTGGCCTCCCGCGGGCGG < 41bp 1 0.265614839634648 1 0.0357026755809784 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223787 chr17:62223780 . . 0 14 hm5C_associated_SNPs_24897 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223780 62223780 1 + C A KIRP 62223795 + 62223775 62223815 41 CATAACTGGGGCCGCCTGGCCTCCCGCGGGCGGCCTTTTTA CATAAATGGGGCCGCCTGGCCTCCCGCGGGCGGCCTTTTTA < 41bp 1 0.414306252859904 1 0.409014225006104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223795 chr17:62223780 . . 0 6 hm5C_associated_SNPs_24898 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr1 44058242 44058242 1 + C G KIRP 44058240 + 44058220 44058260 41 TATGGGGGTGGGCGTCTTCACCCCCACCATTGAGGCCCGCA TATGGGGGTGGGCGTCTTCACCGCCACCATTGAGGCCCGCA < 41bp 1 0.192266101092451 1 0.157446771860123 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44058240 chr1:44058242 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_24899 0 0 1 PRPF8 POSTAR2 ENCODE chr1:44058242-44058347
64251 chr16 2818196 2818196 1 + C G KIRP 2818203 + 2818183 2818223 41 TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG TCCTCCTCCTCCTGTGGCTCCAGTTCTAGTGACTCAGAGGG < 41bp 1 0.106219247747464 1 0.407213389873505 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818203 chr16:2818196 nonsynonymous SNV 0.959 3 14 hm5C_associated_SNPs_24900 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2818170-2818198
64251 chr2 32656054 32656054 1 + A C KIRP 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGACGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA < 41bp 1 0.270888619611634 1 0.0984092354774475 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656054 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_24902 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr2 27440797 27440797 1 + C A KIRP 27440789 + 27440769 27440809 41 ACCCCGAGGCCCTCACCGATCCCTCCTACAAGGCACAGATC ACCCCGAGGCCCTCACCGATCCCTCCTAAAAGGCACAGATC < 41bp 1 0.0446679932201439 1 0.162683725357056 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27440789 chr2:27440797 stopgain 0.998 1 29 hm5C_associated_SNPs_24904 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:27440796-27440824
64251 chr16 457438 457438 1 + T G KIRP 457427 + 457407 457447 41 TCTTTACCTGGCTTCTAGGCCGCCAGGAAGCTGGCTGGGGC TCTTTACCTGGCTTCTAGGCCGCCAGGAAGCGGGCTGGGGC < 41bp 1 0.750310794515571 1 0.523253679275513 experiment 0.499378410968859 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DECR2 ENSG00000242612 CDS Human protein_coding chr16:457427 chr16:457438 nonsynonymous SNV 0.944 3 32 hm5C_associated_SNPs_24905 0 0 7 BUD13 POSTAR2 ENCODE chr16:457367-457456
64251 chr3 47032943 47032943 1 + G T KIRP 47032958 + 47032938 47032978 41 CTGCTGAGTGTGGTGCGGGGCTGGAGCCGTGGGCCAGCCCC CTGCTTAGTGTGGTGCGGGGCTGGAGCCGTGGGCCAGCCCC < 41bp 1 0.736386796350064 1 0.80940306186676 experiment 0.527226407299872 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47032958 chr3:47032943 synonymous SNV . 0 6 hm5C_associated_SNPs_24906 0 0 1 EIF3H POSTAR2 ENCODE chr3:47032902-47032968
64251 chr14 102466716 102466716 1 + G A KIRP 102466707 + 102466687 102466727 41 AAATCGATCAGATGAAGGAGCAACCCTGGGTTTCAGTACAG AAATCGATCAGATGAAGGAGCAACCCTGGATTTCAGTACAG < 41bp 1 0.0429286061353938 1 0.197894483804703 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466707 chr14:102466716 nonsynonymous SNV 0.966 1 30 hm5C_associated_SNPs_24908 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466642-102466729
64251 chr12 6976722 6976722 1 + T C KIRP 6976702 + 6976682 6976722 41 GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCT GCCGCGACTGCGCGCAGACACTGACCTTCAGCGCCTCGGCC < 41bp 1 0.560254796365643 1 0.0342004001140594 experiment 0.879490407268715 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6976702 chr12:6976722 nonsynonymous SNV 0.000 0 41 hm5C_associated_SNPs_24909 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:6976720-6976820
64251 chr20 30723909 30723909 1 + A G KIRP 30723891 + 30723871 30723911 41 CATCAGGCTGTGAAGCTCACCAGCTCTCGAACCCAGCTACC CATCAGGCTGTGAAGCTCACCAGCTCTCGAACCCAGCTGCC < 41bp 1 0.449494261246951 1 0.664496839046478 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30723891 chr20:30723909 synonymous SNV . 0 39 hm5C_associated_SNPs_24910 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:30723877-30723914
64251 chr4 57891054 57891054 1 + A G KIRP 57891056 + 57891036 57891076 41 CTTTTTTTTTTAAAAGGTATCGGCTAACAAGGGTGAAATTG CTTTTTTTTTTAAAAGGTGTCGGCTAACAAGGGTGAAATTG < 41bp 1 0.341517471203792 1 0.437217444181442 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57891056 chr4:57891054 synonymous SNV . 0 19 hm5C_associated_SNPs_24912 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:57891054-57891055
64251 chr11 108206609 108206609 1 + A C KIRP 108206601 + 108206581 108206621 41 GACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT GACCTGAGACAAGATGCTGTCATGCAACCGGTCTTCCAGAT < 41bp 1 0.175647673362855 1 0.234654277563095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108206601 chr11:108206609 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_24915 0 0 3 BUD13 POSTAR2 ENCODE chr11:108206591-108206664
64251 chr10 76468112 76468112 1 + T C KIRP 76468126 + 76468106 76468146 41 AGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCA AGCCTCCGACTGAATGTATCCGTGCTGGCCACTATGCAGCA < 41bp 1 0.421775619041493 1 0.704199910163879 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADK ENSG00000156110 CDS Human protein_coding chr10:76468126 chr10:76468112 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_24916 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr10:76468091-76468127
64251 chr7 44685022 44685022 1 + G T KIRP 44685003 + 44684983 44685023 41 CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGT CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTTT < 41bp 1 0.297452241149274 1 0.613104283809662 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44685003 chr7:44685022 nonsynonymous SNV 0.650 0 40 hm5C_associated_SNPs_24918 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:44685020-44685040
64251 chr1 28862497 28862497 1 + G A KIRP 28862499 + 28862479 28862519 41 TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTC TTGCCATCTCCCATGAGGACCACGTGTACGGCTTCGGCCTC < 41bp 1 0.654526601093611 1 0.123857408761978 experiment 0.690946797812778 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862499 chr1:28862497 nonsynonymous SNV 0.858 5 19 hm5C_associated_SNPs_24919 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28862448-28862506
64251 chr20 25198149 25198149 1 + G C KIRP 25198155 + 25198135 25198175 41 CAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC CAGGGCACCCTGCACGCCTCCCCACCCGGCTACCTGACGGC < 41bp 1 0.124491465332952 1 0.0676386058330536 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25198155 chr20:25198149 nonsynonymous SNV 0.072 0 15 hm5C_associated_SNPs_24920 0 0 3 GRWD1 POSTAR2 ENCODE chr20:25198137-25198174
64251 chr6 34730469 34730469 1 + T C KIRP 34730453 + 34730433 34730473 41 ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGAC ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGACTGAC < 41bp 1 0.650417150971383 1 0.838448762893677 experiment 0.699165698057234 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNRPC ENSG00000124562 CDS Human protein_coding chr6:34730453 chr6:34730469 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_24921 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34730437-34730473
64251 chr7 79842142 79842142 1 + A G KIRP 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAGATCAAAAAGAGCCCTCTCACTATATGCTATCCAG < 41bp 1 0.120290350835709 1 0.0629518628120422 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842142 synonymous SNV . 0 7 hm5C_associated_SNPs_24922 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr3 50005960 50005960 1 + G T KIRP 50005946 + 50005926 50005966 41 CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGT CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAATATAAGT < 41bp 1 0.0882594598773504 1 0.224473655223846 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005946 chr3:50005960 nonsynonymous SNV 0.998 2 35 hm5C_associated_SNPs_24923 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50005826-50005963
64251 chr4 25396298 25396298 1 + A G KIRP 25396309 + 25396289 25396329 41 GTAGTGCTGAACTTCAGACTCTCTTGATGAATCAGTTAACA GTAGTGCTGGACTTCAGACTCTCTTGATGAATCAGTTAACA < 41bp 1 0.25137952257545 1 0.141301870346069 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25396309 chr4:25396298 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_24924 0 0 4 U2AF2 POSTAR2 GSE83923,CSM2221657 chr4:25396280-25396300
64251 chr7 139107032 139107032 1 + T A KIRP 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAA < 41bp 1 0.209628237157829 1 0.689703464508057 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107032 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_24925 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107032 139107032 1 + T A KIRP 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAAGGCA < 41bp 1 0.0854970936584389 1 0.155830532312393 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107032 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_24926 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107032 139107032 1 + T A KIRP 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAAGGCAG < 41bp 1 0.186264226123515 1 0.0635410249233246 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107032 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_24927 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107032 139107032 1 + T A KIRP 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGCGGTCCTATGAGAGTGCTAAAGGCAGATCAGAAGACA < 41bp 1 0.641684114870294 1 0.322354674339294 experiment 0.716631770259412 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107032 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_24928 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107032 139107032 1 + T A KIRP 139107035 + 139107015 139107055 41 TCCTATGAGAGTGCTAATGGCAGATCAGAAGACAGGAGGAG TCCTATGAGAGTGCTAAAGGCAGATCAGAAGACAGGAGGAG < 41bp 1 0.529639212405254 1 0.515307903289795 experiment 0.940721575189491 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107035 chr7:139107032 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_24929 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr20 62374341 62374341 1 + T C KIRP 62374321 + 62374301 62374341 41 AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACC < 41bp 1 0.169514564545298 1 0.318797469139099 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374321 chr20:62374341 stoploss 0.778 0 41 hm5C_associated_SNPs_24930 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:62374318-62374357
64251 chr1 31897695 31897695 1 + G A KIRP 31897691 + 31897671 31897711 41 ATGCTCTGCGTGAGCAGCAGCCGGGACCCCCGGGCTGCCAT ATGCTCTGCGTGAGCAGCAGCCGGAACCCCCGGGCTGCCAT < 41bp 1 0.777326526851515 1 0.842498779296875 experiment 0.445346946296969 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31897691 chr1:31897695 nonsynonymous SNV 0.962 4 25 hm5C_associated_SNPs_24931 0 0 3 DDX3X POSTAR2 ENCODE chr1:31897660-31897700
64251 chr10 17276732 17276732 1 + C G KIRP 17276740 + 17276720 17276760 41 GGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT GGAACAATGACGGCCTGCGCCAGGCAAAGCAGGAGTCCACT < 41bp 1 0.50747860041638 1 0.849276065826416 experiment 0.98504279916724 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276740 chr10:17276732 nonsynonymous SNV 0.997 5 13 hm5C_associated_SNPs_24936 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr10:17276691-17276742
64251 chr16 4700468 4700468 1 + G T KIRP 4700472 + 4700452 4700492 41 GATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCT GATCTGAACTTCCTGGTCAGCCGCCCGGTCCAGGTGGGTCT < 41bp 1 0.142783906491315 1 0.0697120130062103 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700472 chr16:4700468 nonsynonymous SNV 0.981 4 17 hm5C_associated_SNPs_24937 0 0 4 BUD13 POSTAR2 ENCODE chr16:4700457-4700565
64251 chr17 57771125 57771125 1 + T C KIRP 57771132 + 57771112 57771152 41 GCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGG GCAGGACCCAGTGCTGCCGTCCCTCCCCAGGCACCTTTTGG < 41bp 1 0.0350922076160754 1 0.141295462846756 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57771132 chr17:57771125 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_24938 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:57771069-57771126
64251 chr2 217364692 217364692 1 + T A KIRP 217364687 + 217364667 217364707 41 TATAGACCAAGATGAAGAGACGAGCTGTGGGGATCTGGCAC TATAGACCAAGATGAAGAGACGAGCAGTGGGGATCTGGCAC < 41bp 1 0.626563007154302 1 0.198438376188278 experiment 0.746873985691396 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364687 chr2:217364692 synonymous SNV . 0 26 hm5C_associated_SNPs_24939 0 0 73 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364692 217364692 1 + T A KIRP 217364705 + 217364685 217364725 41 GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG GACGAGCAGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG < 41bp 1 0.691548758241717 1 0.145068049430847 experiment 0.616902483516566 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364705 chr2:217364692 synonymous SNV . 0 8 hm5C_associated_SNPs_24940 0 0 73 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr19 59057198 59057198 1 + G A KIRP 59057191 + 59057171 59057211 41 ACTGTGTGGAGTGCTCGGAGCCTCTGTGTGAGACCTGTGTA ACTGTGTGGAGTGCTCGGAGCCTCTGTATGAGACCTGTGTA < 41bp 1 0.0873415436802791 1 0.0536020696163177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057191 chr19:59057198 nonsynonymous SNV 0.996 5 28 hm5C_associated_SNPs_24941 0 0 38 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59057120-59057200
64251 chr19 59057198 59057198 1 + G A KIRP 59057205 + 59057185 59057225 41 TCGGAGCCTCTGTGTGAGACCTGTGTAGAGGCGCACCAGCG TCGGAGCCTCTGTATGAGACCTGTGTAGAGGCGCACCAGCG < 41bp 1 0.353517700341776 1 0.0884530544281006 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057205 chr19:59057198 nonsynonymous SNV 0.996 5 14 hm5C_associated_SNPs_24942 0 0 38 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59057120-59057200
64251 chr22 38461040 38461040 1 + G A KIRP 38461023 + 38461003 38461043 41 CCACAGGTATTTGACAACACCCCAGCAGCCTTGGACGGCAC CCACAGGTATTTGACAACACCCCAGCAGCCTTGGACGACAC < 41bp 1 0.288615659806304 1 0.0690192878246307 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PICK1 ENSG00000100151 CDS Human protein_coding chr22:38461023 chr22:38461040 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_24945 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:38461015-38461045
64251 chr7 128407599 128407599 1 + C A KIRP 128407598 + 128407578 128407618 41 GTTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAA GTTGAGTTTCGGGATAAGAACAGTGATGGGAAGATGGACAA < 41bp 1 0.742671376448144 1 0.293393194675446 experiment 0.514657247103713 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407598 chr7:128407599 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_24946 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr19 36128157 36128157 1 + G A KIRP 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAAGTGAT < 41bp 1 0.172027483035868 1 0.605333209037781 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128157 synonymous SNV . 0 36 hm5C_associated_SNPs_24948 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:36128113-36128184
64251 chr15 79185887 79185887 1 + T C KIRP 79185883 + 79185863 79185903 41 ATATTTTTGTCTTCATAGCTCTTTTATCTTCCTGCCAAGAA ATATTTTTGTCTTCATAGCTCTTTCATCTTCCTGCCAAGAA < 41bp 1 0.0325058772089042 1 0.052255243062973 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79185883 chr15:79185887 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_24949 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79185863-79185887
64251 chr11 65829382 65829382 1 + C A KIRP 65829381 + 65829361 65829401 41 GAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGC GAATGCCCACAAGGTCCCTCCACCATGGCTGATTGCCATGC < 41bp 1 0.762213546314679 1 0.306530296802521 experiment 0.475572907370641 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65829381 chr11:65829382 synonymous SNV . 0 22 hm5C_associated_SNPs_24950 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65829371-65829390
64251 chr10 31812949 31812949 1 + G T KIRP 31812931 + 31812911 31812951 41 GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGA GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCTGA < 41bp 1 0.248385163389494 1 0.197263538837433 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31812931 chr10:31812949 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_24952 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr10:31812941-31812992
64251 chr5 7878202 7878202 1 + G T KIRP 7878185 + 7878165 7878205 41 ATCACCTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGC ATCACCTGCATCCTCGAGGACAGACCTTGTGAAGTCATAGC < 41bp 1 0.284620377268449 1 0.078850656747818 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878185 chr5:7878202 stopgain 0.015 0 38 hm5C_associated_SNPs_24953 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:7878185-7878223
64251 chr5 7878202 7878202 1 + G T KIRP 7878190 + 7878170 7878210 41 CTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGCTGCTA CTGCATCCTCGAGGACAGACCTTGTGAAGTCATAGCTGCTA < 41bp 1 0.543548910868611 1 0.0485751032829285 experiment 0.912902178262778 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878190 chr5:7878202 stopgain 0.015 0 33 hm5C_associated_SNPs_24954 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:7878185-7878223
64251 chr3 50257565 50257565 1 + A G KIRP 50257570 + 50257550 50257590 41 TTGAGCTTCATCATCATTGACTGGGCCTCAGGGACCAGCCG TTGAGCTTCATCATCGTTGACTGGGCCTCAGGGACCAGCCG < 41bp 1 0.609414838266627 1 0.263521134853363 experiment 0.781170323466745 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50257570 chr3:50257565 . 1.000 0 16 hm5C_associated_SNPs_24955 0 0 2 DDX55 POSTAR2 ENCODE chr3:50257561-50257609
64251 chr22 30413918 30413918 1 + G T KIRP 30413919 + 30413899 30413939 41 TCCTCCCCCCTCCTCAGGTGCTGTACCCTGTGTGCCATGTG TCCTCCCCCCTCCTCAGGTTCTGTACCCTGTGTGCCATGTG < 41bp 1 0.217686646096059 1 0.118562817573547 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30413919 chr22:30413918 synonymous SNV . 0 20 hm5C_associated_SNPs_24956 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr22:30413916-30413957
64251 chr16 19548870 19548870 1 + T A KIRP 19548865 + 19548845 19548885 41 AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA AAAAAGATACCCTAAGGGATCTGGCATCGTTAACAAGAATA < 41bp 1 0.382011229305086 1 0.131814986467361 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548865 chr16:19548870 nonsynonymous SNV 0.958 0 26 hm5C_associated_SNPs_24957 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:19548850-19548873
64251 chr7 150769158 150769158 1 + C A KIRP 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCCGCTTCACCAAGGAGATCTTCGCCTTCTTGATCTCACT < 41bp 1 0.0567112412170182 1 0.0287495851516724 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769158 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_24958 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chr7 45112359 45112359 1 + C T KIRP 45112377 + 45112357 45112397 41 ACCTACGAGGTGGAAGCCAGCACTTTGTGAGTGCACATGCC ACTTACGAGGTGGAAGCCAGCACTTTGTGAGTGCACATGCC < 41bp 1 0.307863478745071 1 0.051062136888504 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112377 chr7:45112359 synonymous SNV . 0 3 hm5C_associated_SNPs_24959 0 0 2 BUD13 POSTAR2 ENCODE chr7:45112332-45112398
64251 chr11 9451343 9451343 1 + G A KIRP 9451359 + 9451339 9451379 41 TGAAGAAGTTACTCCTATTGCAGTAGAAATGACACAACATT TGAAAAAGTTACTCCTATTGCAGTAGAAATGACACAACATT < 41bp 1 0.532627788177613 1 0.555414199829102 experiment 0.934744423644775 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9451359 chr11:9451343 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_24961 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9451254-9451355
64251 chr16 30749163 30749163 1 + C G KIRP 30749182 + 30749162 30749202 41 TCTCTCACCCCTTCTGCACCCAGCCTGACCTTGGAGGCTGG TGTCTCACCCCTTCTGCACCCAGCCTGACCTTGGAGGCTGG < 41bp 1 0.221607264618151 1 0.497393310070038 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30749182 chr16:30749163 nonsynonymous SNV 0.025 2 2 hm5C_associated_SNPs_24962 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30749099-30749174
64251 chr21 47978259 47978259 1 + G A KIRP 47978252 + 47978232 47978272 41 AAGGACCTGGGCCTGCCGGCCCGCGCCGTAAGCACCACGTT AAGGACCTGGGCCTGCCGGCCCGCGCCATAAGCACCACGTT < 41bp 1 0.290337026864449 1 0.607302486896515 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47978252 chr21:47978259 nonsynonymous SNV 0.506 3 28 hm5C_associated_SNPs_24963 0 0 4 BUD13 POSTAR2 ENCODE chr21:47978158-47978301
64251 chr10 135209677 135209677 1 + C T KIRP 135209670 + 135209650 135209690 41 TACCTTAATTTTGCCACATCCCACTTTCAGGCCGCAACCCT TACCTTAATTTTGCCACATCCCACTTTTAGGCCGCAACCCT < 41bp 1 0.0800027056028172 1 0.117035150527954 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135209670 chr10:135209677 nonsynonymous SNV 0.998 1 28 hm5C_associated_SNPs_24964 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:135209677-135209703
64251 chr12 112227694 112227694 1 + T C KIRP 112227678 + 112227658 112227698 41 GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCTACAC GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCCACAC < 41bp 1 0.77142136052747 1 0.847799062728882 experiment 0.45715727894506 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227678 chr12:112227694 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_24965 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:112227685-112227732
64251 chr19 1255053 1255053 1 + C T LGG 1255058 + 1255038 1255078 41 GGTCTTCTCAGGGACCTTCTCTGGTAGGTGTCACAGCACAT GGTCTTCTCAGGGACTTTCTCTGGTAGGTGTCACAGCACAT < 41bp 1 0.698332876813565 1 0.507118999958038 experiment 0.603334246372869 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1255058 chr19:1255053 synonymous SNV . 0 16 hm5C_associated_SNPs_24966 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:1254994-1255053
64251 chr15 99673028 99673028 1 + G T LGG 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGGTGTGTCTGACCGTGTTTCCTGGAGAGACGC < 41bp 1 0.212080859634698 1 0.056707352399826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673028 nonsynonymous SNV 0.269 3 26 hm5C_associated_SNPs_24967 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99673013-99673032
64251 chr5 53815358 53815358 1 + C G LGG 53815367 + 53815347 53815387 41 TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC TAGCGCTGTATGAGGGGCATCTGGCTAACTTCCCGGACATC < 41bp 1 0.393801648362055 1 0.46127861738205 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815367 chr5:53815358 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_24968 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:53815340-53815360
64251 chr14 104638942 104638942 1 + G A LGG 104638925 + 104638905 104638945 41 CCCCTAGGCCGAAGTCTGCTCGGGGACCGTGGCCGACGTGC CCCCTAGGCCGAAGTCTGCTCGGGGACCGTGGCCGACATGC < 41bp 1 0.737305770336435 1 0.92746114730835 experiment 0.525388459327129 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104638925 chr14:104638942 nonsynonymous SNV 0.895 3 38 hm5C_associated_SNPs_24969 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:104638940-104638960
64251 chr9 140137629 140137629 1 + G A LGG 140137636 + 140137616 140137656 41 GTGTTCAGGGGCCGCATGTCCATGAAGGAGGTGGATGAGCA GTGTTCAGGGGCCACATGTCCATGAAGGAGGTGGATGAGCA < 41bp 1 0.787323166142088 1 0.203146308660507 experiment 0.425353667715824 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137636 chr9:140137629 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_24970 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:140137600-140137640
64251 chr2 32724735 32724735 1 + A T LGG 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAGAATCGGTTTCATTTTTAGTGCACC < 41bp 1 0.0513132576956378 1 0.248642772436142 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724735 nonsynonymous SNV 0.997 1 26 hm5C_associated_SNPs_24971 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr3 160122126 160122126 1 + A C LGG 160122141 + 160122121 160122161 41 GGATGATTATGAAGTCATTCCTAACAGTAATTTCTATGTAT GGATGCTTATGAAGTCATTCCTAACAGTAATTTCTATGTAT < 41bp 1 0.111057899554337 1 0.0577127039432526 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160122141 chr3:160122126 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_24972 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160122120-160122140
64251 chrX 73046827 73046827 1 - T C LGG 73046824 - 73046804 73046844 41 GGCCTGAAACCAACAAAAGCCTCAAGAGCCAAGAAAACAGA GGCCTGAAACCAACAAAGGCCTCAAGAGCCAAGAAAACAGA < 41bp 1 0.421623252187882 1 0.609633326530457 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046824 chrX:73046827 . . 0 18 hm5C_associated_SNPs_24973 0 0 73 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73046827 73046827 1 - T C LGG 73046834 - 73046814 73046854 41 AGAAGCCTCAGGCCTGAAACCAACAAAAGCCTCAAGAGCCA AGAAGCCTCAGGCCTGAAACCAACAAAGGCCTCAAGAGCCA < 41bp 1 0.587414280553409 1 0.367948114871979 experiment 0.825171438893182 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046834 chrX:73046827 . . 0 28 hm5C_associated_SNPs_24974 0 0 73 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr19 50031744 50031744 1 + A G LGG 50031728 + 50031708 50031748 41 CTTTGCCACTCCCCAGGGACCGATGATGTGGCGACCATCAG CTTTGCCACTCCCCAGGGACCGATGATGTGGCGACCGTCAG < 41bp 1 0.567507040796658 1 0.34754005074501 experiment 0.864985918406684 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RCN3 ENSG00000142552 CDS Human protein_coding chr19:50031728 chr19:50031744 synonymous SNV . 0 37 hm5C_associated_SNPs_24977 0 0 1 U2AF1 POSTAR2 ENCODE chr19:50031683-50031759
64251 chr16 67575592 67575592 1 + T G LGG 67575598 + 67575578 67575618 41 CCCTCAGCTGCTTCTTCTGTCAACAAGGCCTCCACAGTCAC CCCTCAGCTGCTTCGTCTGTCAACAAGGCCTCCACAGTCAC < 41bp 1 0.648236910587585 1 0.745540678501129 experiment 0.703526178824829 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575598 chr16:67575592 synonymous SNV . 0 15 hm5C_associated_SNPs_24980 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:67575588-67575614
64251 chr19 14568915 14568915 1 + A T LGG 14568926 + 14568906 14568946 41 GTGGCCCCAATGCCTGGGACCAGAGCTTCACTCTGGAGCTG GTGGCCCCATTGCCTGGGACCAGAGCTTCACTCTGGAGCTG < 41bp 1 0.539360018923535 1 0.606367886066437 experiment 0.92127996215293 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14568926 chr19:14568915 nonsynonymous SNV 0.391 1 10 hm5C_associated_SNPs_24981 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:14568914-14568943
64251 chr11 65268906 65268906 1 + C A LGG 65268891 + 65268871 65268911 41 GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTA GAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGATGGTA < 41bp 1 0.140330758054017 1 0.228761494159698 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268891 chr11:65268906 . . 0 36 hm5C_associated_SNPs_24982 0 0 107 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268900-65268920
64251 chr3 196533532 196533532 1 + C T LGG 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCCGTTATTGTCCCGCGACCGGATCATACGAA < 41bp 1 0.549846415241325 1 0.739472508430481 experiment 0.900307169517349 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533532 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_24984 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:196533507-196533538
64251 chr18 19751547 19751547 1 + T A LGG 19751565 + 19751545 19751585 41 TGTACCAGACCCTCGCCGCTCTCTCCAGCCAGGGTCCGGCC TGAACCAGACCCTCGCCGCTCTCTCCAGCCAGGGTCCGGCC < 41bp 1 0.249229776712602 1 0.0262877941131592 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GATA6 ENSG00000141448 CDS Human protein_coding chr18:19751565 chr18:19751547 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_24985 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:19751540-19751564
64251 chr17 16342838 16342838 1 + A G LGG 16342848 + 16342828 16342868 41 GATACTTGTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC GATACTTGTAGTAGGAAGTGCCGTCAGAAGCGATAACTGAC < 41bp 1 0.0289423739359801 1 0.35114997625351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49B ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342848 chr17:16342838 . . 0 11 hm5C_associated_SNPs_24986 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 37676268 37676268 1 + G A LGG 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGCAGTGCACAGCTGAACAGACCCTACA < 41bp 1 0.209270566648212 1 0.0847953259944916 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676268 nonsynonymous SNV 0.987 3 17 hm5C_associated_SNPs_24987 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr9 37500851 37500851 1 + G A LGG 37500857 + 37500837 37500877 41 GTGCTCTGGGACCTGGAGTTCCCCACATCATCAACACCAAA GTGCTCTGGGACCTAGAGTTCCCCACATCATCAACACCAAA < 41bp 1 0.4306258961763 1 0.120303630828857 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37500857 chr9:37500851 nonsynonymous SNV 0.482 3 15 hm5C_associated_SNPs_24988 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:37500780-37500853
64251 chr6 7579935 7579935 1 + T C LGG 7579952 + 7579932 7579972 41 AGATTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC AGACTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC < 41bp 1 0.209285021444391 1 0.330380469560623 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579952 chr6:7579935 nonsynonymous SNV 0.999 5 4 hm5C_associated_SNPs_24989 2 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7579920-7579940
64251 chr19 33581715 33581715 1 + C T LGG 33581723 + 33581703 33581743 41 TTTGTGTCTTCACGACAGAACAGAGCAGACAAATCTGTTCT TTTGTGTCTTCATGACAGAACAGAGCAGACAAATCTGTTCT < 41bp 1 0.389690376170015 1 0.217188537120819 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33581723 chr19:33581715 stopgain 0.998 1 13 hm5C_associated_SNPs_24990 0 0 1 UCHL5 POSTAR2 ENCODE chr19:33581690-33581728
64251 chr8 68074125 68074125 1 + A G LGG 68074141 + 68074121 68074161 41 GTTGACAGCATCATACGTTCCTTTATTCATGTATGTACTTT GTTGGCAGCATCATACGTTCCTTTATTCATGTATGTACTTT < 41bp 1 0.236750737745372 1 0.0269953310489655 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68074141 chr8:68074125 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_24993 0 0 1 UCHL5 POSTAR2 ENCODE chr8:68074064-68074131
64251 chr15 41191832 41191832 1 + C G LGG 41191817 + 41191797 41191837 41 TTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACAC TTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTGTACAC < 41bp 1 0.426249595760229 1 0.121107012033463 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191817 chr15:41191832 nonsynonymous SNV 0.990 1 36 hm5C_associated_SNPs_24995 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41191819-41191854
64251 chr19 11141525 11141525 1 + G C LGG 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGCC < 41bp 1 0.467146378254489 1 0.708521723747253 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141525 nonsynonymous SNV 0.422 4 40 hm5C_associated_SNPs_24997 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:11141512-11141557
64251 chr1 162557442 162557442 1 + C T LGG 162557436 + 162557416 162557456 41 CCAACCATTTCTTCACTGTACCATTTCTGAGAGATGTTGTC CCAACCATTTCTTCACTGTACCATTTTTGAGAGATGTTGTC < 41bp 1 0.0794624845110596 1 0.0143724083900452 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UAP1 ENSG00000117143 CDS Human protein_coding chr1:162557436 chr1:162557442 synonymous SNV . 0 27 hm5C_associated_SNPs_24999 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:162557415-162557444
64251 chr1 31897680 31897680 1 + G A LGG 31897691 + 31897671 31897711 41 ATGCTCTGCGTGAGCAGCAGCCGGGACCCCCGGGCTGCCAT ATGCTCTGCATGAGCAGCAGCCGGGACCCCCGGGCTGCCAT < 41bp 1 0.637341080977454 1 0.842674076557159 experiment 0.725317838045091 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31897691 chr1:31897680 nonsynonymous SNV 0.462 4 10 hm5C_associated_SNPs_25000 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:31897663-31897687
64251 chr5 118484571 118484571 1 + A G LGG 118484585 + 118484565 118484605 41 GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGCCATT GGAAAAGTTGATCTTGCATACATTTGGGAAGAATGGCCATT < 41bp 1 0.0345287351381229 1 0.0820125639438629 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118484585 chr5:118484571 nonsynonymous SNV 0.074 0 7 hm5C_associated_SNPs_25001 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:118484567-118484588
64251 chr3 160137299 160137299 1 + T A LGG 160137312 + 160137292 160137332 41 AAAAAAATCTGGCAGGATTCCAGGAATATATGGAAGATTGG AAAAAAAACTGGCAGGATTCCAGGAATATATGGAAGATTGG < 41bp 1 0.798460731118308 1 0.475194811820984 experiment 0.403078537763383 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160137312 chr3:160137299 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_25002 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160137140-160137330
64251 chr1 153745465 153745465 1 + C T LGG 153745464 + 153745444 153745484 41 TCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTC TCCACCAAGCCACCCAAGAGCTGGCGAAAAGCAGCTCTGTC < 41bp 1 0.560789849729733 1 0.639676928520203 experiment 0.878420300540535 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153745464 chr1:153745465 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_25006 0 0 5 DDX24 POSTAR2 ENCODE chr1:153745409-153745465
64251 chr11 210610 210610 1 + C T LGG 210603 + 210583 210623 41 CTTTACCGACACCTGGGGACCCTTCTCCGGCACTGTGTGAT CTTTACCGACACCTGGGGACCCTTCTCTGGCACTGTGTGAT < 41bp 1 0.012692956713447 1 0.0794930756092072 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:210603 chr11:210610 nonsynonymous SNV 0.897 2 28 hm5C_associated_SNPs_25007 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:210577-210617
64251 chr6 144724310 144724310 1 + G A LGG 144724309 + 144724289 144724329 41 TTACCAAATGGATAAATGCTCGATTTTCAAAGGTAACTGAG TTACCAAATGGATAAATGCTCAATTTTCAAAGGTAACTGAG < 41bp 1 0.0694063439946827 1 0.0900899767875671 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144724309 chr6:144724310 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_25008 0 0 1 GRWD1 POSTAR2 ENCODE chr6:144724303-144724320
64251 chr11 10783517 10783517 1 + C T LGG 10783524 + 10783504 10783544 41 TTAAAAATGGTGTCCAGCTTCTTTCCAGAGCCTATACTATT TTAAAAATGGTGTTCAGCTTCTTTCCAGAGCCTATACTATT < 41bp 1 0.037820110595125 1 0.066793829202652 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CTR9 ENSG00000198730 CDS Human protein_coding chr11:10783524 chr11:10783517 synonymous SNV . 0 14 hm5C_associated_SNPs_25009 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10783510-10783545
64251 chrX 73046569 73046569 1 - A T LGG 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCGAAAAAGGTAACTCAAGACTAACGGCCGGAAT < 41bp 1 0.673155702069676 1 0.327302992343903 experiment 0.653688595860648 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046569 . . 0 20 hm5C_associated_SNPs_25010 0 0 76 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046544-73046574
64251 chrX 73046569 73046569 1 - A T LGG 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTAACTCA < 41bp 1 0.0854333138305165 1 0.175921678543091 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046569 . . 0 37 hm5C_associated_SNPs_25011 0 0 76 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046544-73046574
64251 chr19 11141499 11141499 1 + G A LGG 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGAGGGGCTCGGCCTGAACCTCCAGTCGGC < 41bp 1 0.412282170290686 1 0.465484797954559 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141499 nonsynonymous SNV 0.981 4 14 hm5C_associated_SNPs_25012 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chrX 107821211 107821211 1 + A T LGG 107821198 + 107821178 107821218 41 TTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGG TTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGTCCTAAGG < 41bp 1 0.533248880889058 1 0.665052175521851 experiment 0.933502238221884 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821198 chrX:107821211 synonymous SNV . 0 34 hm5C_associated_SNPs_25013 0 0 2 PPIG POSTAR2 ENCODE chrX:107821202-107821213
64251 chrX 107821211 107821211 1 + A T LGG 107821203 + 107821183 107821223 41 GCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATT GCCCTCCTGGTCCACCAGGACTTCCAGGTCCTAAGGTAATT < 41bp 1 0.0324155785452544 1 0.0243670344352722 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821203 chrX:107821211 synonymous SNV . 0 29 hm5C_associated_SNPs_25014 0 0 2 PPIG POSTAR2 ENCODE chrX:107821202-107821213
64251 chr1 161326623 161326623 1 + G A LGG 161326622 + 161326602 161326642 41 ATCATACCTGGAATGGGATCCGACACTTGGTAAGTTAATTC ATCATACCTGGAATGGGATCCAACACTTGGTAAGTTAATTC < 41bp 1 0.511352111978677 1 0.393554419279099 experiment 0.977295776042647 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHC ENSG00000143252 CDS Human protein_coding chr1:161326622 chr1:161326623 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_25015 1 0 4 PUM2 POSTAR2 ENCODE chr1:161326571-161326632
64251 chr7 6631413 6631413 1 + G A LGG 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGCCCTCAAGGGAACAAAGCCGATGACAGCCAGATGAGCT < 41bp 1 0.144566185027081 1 0.122439563274384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631413 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_25017 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6631413 6631413 1 + G A LGG 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGCCCTCAAGGGAACAAAGCCGATGACAGCCAGATGAGCTT < 41bp 1 0.423597296828801 1 0.506302118301392 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631413 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_25018 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr5 54720585 54720585 1 + C T LGG 54720581 + 54720561 54720601 41 CAAGAGAGATATTGTGTTTGCTGCCAGCCTCTACTTGTAGA CAAGAGAGATATTGTGTTTGCTGCTAGCCTCTACTTGTAGA < 41bp 1 0.356789904084647 1 0.0976587235927582 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54720581 chr5:54720585 synonymous SNV . 0 25 hm5C_associated_SNPs_25019 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:54720559-54720585
64251 chr1 26448766 26448766 1 + G A LGG 26448783 + 26448763 26448803 41 TTTGCTCTGGGGATTATCATCTGGGCAATGCTGGAAAGGAT TTTACTCTGGGGATTATCATCTGGGCAATGCTGGAAAGGAT < 41bp 1 0.796011935944538 1 0.703064441680908 experiment 0.407976128110923 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDIK1L ENSG00000175087 CDS Human protein_coding chr1:26448783 chr1:26448766 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_25021 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:26448737-26448791
64251 chr2 85852729 85852729 1 + G A LGG 85852718 + 85852698 85852738 41 GCAAACTTGGACAAGCAAGCCAAATTGTCCCGGGCATATGA GCAAACTTGGACAAGCAAGCCAAATTGTCCCAGGCATATGA < 41bp 1 0.382869302174902 1 0.176977515220642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP39 ENSG00000168883 CDS Human protein_coding chr2:85852718 chr2:85852729 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_25022 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:85852692-85852732
64251 chr12 57588464 57588464 1 + G A LGG 57588474 + 57588454 57588494 41 TGAACATGGCGAGGACGAGACCCACTGCAGTGAGTGACCAC TGAACATGGCAAGGACGAGACCCACTGCAGTGAGTGACCAC < 41bp 1 0.0336867989449096 1 0.0297261476516724 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57588474 chr12:57588464 nonsynonymous SNV 0.990 1 11 hm5C_associated_SNPs_25023 0 0 2 PPIG POSTAR2 ENCODE chr12:57588456-57588482
64251 chr19 36218411 36218411 1 + C T LGG 36218408 + 36218388 36218428 41 CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAG CTGCGGACCGTGTGCTGGGGCAGTGCAGCCCCGCTGGCGAG < 41bp 1 0.380180767390552 1 0.360568225383759 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218408 chr19:36218411 nonsynonymous SNV 0.019 1 24 hm5C_associated_SNPs_25024 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:36218352-36218412
64251 chr19 17313045 17313045 1 + A C LGG 17313031 + 17313011 17313051 41 GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCACCCTCTT < 41bp 1 0.183103505775339 1 0.0766319036483765 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17313031 chr19:17313045 nonsynonymous SNV 0.998 5 35 hm5C_associated_SNPs_25025 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:17313038-17313061
64251 chr3 47891524 47891524 1 + G C LGG 47891507 + 47891487 47891527 41 CAGCGAGCTGGCTGCACTTCCCCCCAGCGTACAGGAGGAGC CAGCGAGCTGGCTGCACTTCCCCCCAGCGTACAGGAGCAGC < 41bp 1 0.273003016172805 1 0.128994762897491 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47891507 chr3:47891524 nonsynonymous SNV 0.933 0 38 hm5C_associated_SNPs_25027 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:47891494-47891536
64251 chr22 40762494 40762494 1 + G A LGG 40762482 + 40762462 40762502 41 AGGTGTATCCCCTGTTAAAACCATATGAAAGCGTGATGAAG AGGTGTATCCCCTGTTAAAACCATATGAAAGCATGATGAAG < 41bp 1 0.346411937417102 1 0.215944737195969 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADSL ENSG00000239900 CDS Human protein_coding chr22:40762482 chr22:40762494 nonsynonymous SNV 0.706 2 33 hm5C_associated_SNPs_25028 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:40762446-40762627
64251 chr2 217364056 217364056 1 + C T LGG 217364052 + 217364032 217364072 41 GGGACCCGCTATGGGGCCTCCCTCCGGAAAATGGTGAAGAA GGGACCCGCTATGGGGCCTCCCTCTGGAAAATGGTGAAGAA < 41bp 1 0.186668711547187 1 0.190221905708313 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364052 chr2:217364056 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_25029 0 0 54 UPF1 POSTAR2 GSE69586,GSM1704215 chr2:217363980-217364060
64251 chr13 24871562 24871562 1 + C T LGG 24871549 + 24871529 24871569 41 AATTGATTCATTCTGGGGAGCTGACCAAAATCACTAAGCAA AATTGATTCATTCTGGGGAGCTGACCAAAATCATTAAGCAA < 41bp 1 0.063607976359141 1 0.178893625736237 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24871549 chr13:24871562 nonsynonymous SNV 0.371 0 34 hm5C_associated_SNPs_25030 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:24871533-24871566
64251 chr2 32824921 32824921 1 + G A LGG 32824918 + 32824898 32824938 41 TCTTGTGAATCTAGAGACAACTGGTGGTCATAGCGTGCGAT TCTTGTGAATCTAGAGACAACTGATGGTCATAGCGTGCGAT < 41bp 1 0.116399671187909 1 0.143539130687714 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824918 chr2:32824921 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_25031 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:32824913-32824923
64251 chr2 32824921 32824921 1 + G A LGG 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGATGGTCATAGCGTGCGATTCAATCCAAACCT < 41bp 1 0.103540578188235 1 0.527564227581024 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824921 nonsynonymous SNV 0.995 4 11 hm5C_associated_SNPs_25032 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:32824913-32824923
64251 chr10 3155622 3155622 1 + C T LGG 3155619 + 3155599 3155639 41 ACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC ACCCGCGGCTGGGATGAACGCAGTCGTACGCTCAGCTGTGC < 41bp 1 0.524140058814917 1 0.556307315826416 experiment 0.951719882370165 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3155619 chr10:3155622 nonsynonymous SNV 0.216 3 24 hm5C_associated_SNPs_25034 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3155620-3155640
64251 chr7 55259451 55259451 1 + G A LGG 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCAA < 41bp 1 0.081600611714254 1 0.254955679178238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259451 nonsynonymous SNV 0.962 2 40 hm5C_associated_SNPs_25035 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr3 33887073 33887073 1 + G A LGG 33887074 + 33887054 33887094 41 CCAGCAAAGACCATGCAGGGCAGTGAGGTAAGAAGGACACT CCAGCAAAGACCATGCAGGACAGTGAGGTAAGAAGGACACT < 41bp 1 0.343879419223548 1 0.147157996892929 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33887074 chr3:33887073 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_25041 0 0 2 KHSRP POSTAR2 ENCODE chr3:33887068-33887195
64251 chr2 54871561 54871561 1 + C T LGG 54871546 + 54871526 54871566 41 TTACATAAAATGTGGGAAGTCCTTGAATCCACTACCCAGAC TTACATAAAATGTGGGAAGTCCTTGAATCCACTACTCAGAC < 41bp 1 0.0344108096588129 1 0.0932356417179108 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871546 chr2:54871561 synonymous SNV . 0 36 hm5C_associated_SNPs_25042 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:54871533-54871566
64251 chr1 28099831 28099831 1 + C T LGG 28099839 + 28099819 28099859 41 ATGTCATACGGTCCCTTAGACATGTACCGGAACCCGGGGCC ATGTCATACGGTTCCTTAGACATGTACCGGAACCCGGGGCC < 41bp 1 0.606196421766729 1 0.28160297870636 experiment 0.787607156466543 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099839 chr1:28099831 nonsynonymous SNV 0.984 3 13 hm5C_associated_SNPs_25044 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:28099820-28099840
64251 chr7 44836377 44836377 1 + C T LGG 44836378 + 44836358 44836398 41 TCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAGGTCGGG TCGACGGCGAGCCCTTGGGTCGCGTCTCCTTTGAGGTCGGG < 41bp 1 0.625478955428258 1 0.119342029094696 experiment 0.749042089143485 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPIA ENSG00000196262 CDS Human protein_coding chr7:44836378 chr7:44836377 synonymous SNV . 0 20 hm5C_associated_SNPs_25050 0 0 10 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr7:44836377-44836398
64251 chr22 40661411 40661411 1 + G A LGG 40661395 + 40661375 40661415 41 TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGAAT TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGAGAAT < 41bp 1 0.125331867413332 1 0.112174212932587 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40661395 chr22:40661411 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_25051 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40661385-40661416
64251 chr19 50158054 50158054 1 + C T LGG 50158043 + 50158023 50158063 41 CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCT CTGGGGGGCTGCGGTTCGACCCCCCCCACCCTCACCGGGCT < 41bp 1 0.141475448205171 1 0.172426342964172 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158043 chr19:50158054 nonsynonymous SNV 0.994 4 32 hm5C_associated_SNPs_25052 0 0 2 GRWD1 POSTAR2 ENCODE chr19:50158021-50158063
64251 chr2 3623241 3623241 1 + G A LGG 3623246 + 3623226 3623266 41 GAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCA GAAGCCCAATGGCGAAAAGCCGGACGAGTTCGAGTCCGGCA < 41bp 1 0.732500027547664 1 0.312350302934647 experiment 0.534999944904673 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3623246 chr2:3623241 synonymous SNV . 0 16 hm5C_associated_SNPs_25053 0 0 7 DDX3X POSTAR2 ENCODE chr2:3623215-3623245
64251 chr17 77757722 77757722 1 + C T LGG 77757717 + 77757697 77757737 41 CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGA CCAAACCCGAGCTGAAGGATCCCATTCGGAAGAAGCGGGGA < 41bp 1 0.165446212342449 1 0.141133219003677 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77757717 chr17:77757722 synonymous SNV . 0 26 hm5C_associated_SNPs_25054 0 0 1 PPIG POSTAR2 ENCODE chr17:77757695-77757764
64251 chr17 7838346 7838346 1 + C T LGG 7838362 + 7838342 7838382 41 CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC CAGCTCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC < 41bp 1 0.201749683144536 1 0.109773278236389 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7838362 chr17:7838346 synonymous SNV . 0 5 hm5C_associated_SNPs_25056 0 0 1 U2AF1 POSTAR2 ENCODE chr17:7838307-7838386
64251 chr16 2811732 2811732 1 + G A LGG 2811746 + 2811726 2811766 41 AACTCGGGACCGTTCACCACCTAAGTCTCCCGAGAAACTTC AACTCGAGACCGTTCACCACCTAAGTCTCCCGAGAAACTTC < 41bp 1 0.417684856590996 1 0.148360967636108 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811746 chr16:2811732 synonymous SNV . 0 7 hm5C_associated_SNPs_25057 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2811700-2811780
64251 chr14 73569942 73569942 1 + G A LGG 73569939 + 73569919 73569959 41 GCAAAAAGGAAAAAGAAAGACAGGAAATTGAGAAAGAACGG GCAAAAAGGAAAAAGAAAGACAGAAAATTGAGAAAGAACGG < 41bp 1 0.712266858968361 1 0.735930383205414 experiment 0.575466282063278 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RBM25 ENSG00000119707 CDS Human protein_coding chr14:73569939 chr14:73569942 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_25058 0 0 12 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr14:73569920-73569960
64251 chr19 5691425 5691425 1 + C T LGG 5691407 + 5691387 5691427 41 GCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTCTC GCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTTTC < 41bp 1 0.382091069519315 1 0.30011573433876 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691407 chr19:5691425 synonymous SNV . 0 39 hm5C_associated_SNPs_25060 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:5691420-5691440
64251 chr19 5691425 5691425 1 + C T LGG 5691427 + 5691407 5691447 41 CATGGAGTTACTGAAGGTCTCCAAGGACAAACGGGCCCTCA CATGGAGTTACTGAAGGTTTCCAAGGACAAACGGGCCCTCA < 41bp 1 0.434857318641319 1 0.842389583587646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691427 chr19:5691425 synonymous SNV . 0 19 hm5C_associated_SNPs_25061 0 0 61 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:5691420-5691440
64251 chr19 42729929 42729929 1 + C T LGG 42729916 + 42729896 42729936 41 CTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACC CTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCTCGGCACC < 41bp 1 0.155763645041989 1 0.0794595181941986 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729916 chr19:42729929 synonymous SNV . 0 34 hm5C_associated_SNPs_25062 0 0 2 RBM15 POSTAR2 ENCODE chr19:42729889-42729947
64251 chr2 207175003 207175003 1 + C T LGG 207175004 + 207174984 207175024 41 TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG TGGCCTTAGATAAACCATGTCATCGTCATCCTCCAGCAGAG < 41bp 1 0.328141621586253 1 0.100830912590027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175004 chr2:207175003 synonymous SNV . 0 20 hm5C_associated_SNPs_25063 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr20 330377 330377 1 + C T LGG 330383 + 330363 330403 41 CGCTCCTACCTGCACCTCTTCTATGAGGACTGTGCAGGCAC CGCTCCTACCTGCATCTCTTCTATGAGGACTGTGCAGGCAC < 41bp 1 0.343561938087152 1 0.0899324119091034 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330383 chr20:330377 synonymous SNV . 0 15 hm5C_associated_SNPs_25064 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr20 330377 330377 1 + C T LGG 330392 + 330372 330412 41 CTGCACCTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAG CTGCATCTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAG < 41bp 1 0.386863581078483 1 0.0507500469684601 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330392 chr20:330377 synonymous SNV . 0 6 hm5C_associated_SNPs_25065 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr2 48033352 48033352 1 + C T LGG 48033370 + 48033350 48033390 41 TACTGCAACATTTGATGGGACGGCAATAGCAAATGCAGTTG TATTGCAACATTTGATGGGACGGCAATAGCAAATGCAGTTG < 41bp 1 0.703491801286036 1 0.175381869077682 experiment 0.593016397427929 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48033370 chr2:48033352 nonsynonymous SNV 0.994 5 3 hm5C_associated_SNPs_25067 1 0 10 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:48033340-48033360
64251 chr7 150761801 150761801 1 + G A LGG 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GCCAGCGAGGCTGAGAGGGCCCGGGCTCTCACTCAGCCGTC < 41bp 1 0.556958067965951 1 0.323626428842545 experiment 0.886083864068098 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761801 nonsynonymous SNV 0.137 0 16 hm5C_associated_SNPs_25068 0 0 3 DDX24 POSTAR2 ENCODE chr7:150761764-150761844
64251 chr3 50131259 50131259 1 + G A LGG 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAACAAGACCATCATGCTGCGCGGCCTTCCCAT < 41bp 1 0.418122029996041 1 0.216083914041519 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131259 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_25069 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50131144-50131269
64251 chrX 70779241 70779241 1 + C T LGG 70779251 + 70779231 70779271 41 CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAAATT CTTATGCAGTTTATTCCAGGCATGCACAATCCTGATAAATT < 41bp 1 0.0660741512451955 1 0.0562679171562195 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70779251 chrX:70779241 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_25070 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:70779205-70779249
64251 chr12 110770427 110770427 1 + G A LGG 110770433 + 110770413 110770453 41 GGACAGAGTGGAAGGTGATACTTGTTCCCTTAATGAGTTTA GGACAGAGTGGAAGATGATACTTGTTCCCTTAATGAGTTTA < 41bp 1 0.177084683476781 1 0.0827886164188385 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110770433 chr12:110770427 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_25071 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr12:110770401-110770466
64251 chr1 164790803 164790803 1 + G A LGG 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAAACAGGAGGATACAGTGATGGACTCGCAGCCAG < 41bp 1 0.633749889504532 1 0.370991379022598 experiment 0.732500220990937 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790803 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_25072 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr2 3623248 3623248 1 + G A LGG 3623246 + 3623226 3623266 41 GAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCA GAAGCCCAATGGCGAGAAGCCGAACGAGTTCGAGTCCGGCA < 41bp 1 0.614756839772906 1 0.235012143850327 experiment 0.770486320454188 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3623246 chr2:3623248 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_25075 0 0 8 DDX3X POSTAR2 ENCODE chr2:3623245-3623265
64251 chr6 7579661 7579661 1 + G A LGG 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGTTCAAAGCGAAGCTTGCGAGCCTGAAGGAGCTGAAGA < 41bp 1 0.292891107627426 1 0.475586324930191 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579661 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_25077 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:7579660-7579680
64251 chr3 49210376 49210376 1 + A G LGG 49210393 + 49210373 49210413 41 CACATGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTG CACGTGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTG < 41bp 1 0.123344427068119 1 0.132202088832855 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49210393 chr3:49210376 synonymous SNV . 0 4 hm5C_associated_SNPs_25079 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49210352-49210377
64251 chr3 49210376 49210376 1 + A G LGG 49210394 + 49210374 49210414 41 ACATGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTGG ACGTGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCTGG < 41bp 1 0.185391249972112 1 0.491352766752243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49210394 chr3:49210376 synonymous SNV . 0 3 hm5C_associated_SNPs_25080 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49210352-49210377
64251 chrX 133511650 133511650 1 + G C LGG 133511658 + 133511638 133511678 41 TTTAAAAATCATGTCAAGCTCAGTTGAACAGAAAAAAGGGC TTTAAAAATCATCTCAAGCTCAGTTGAACAGAAAAAAGGGC < 41bp 1 0.206954761880937 1 0.302816808223724 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133511658 chrX:133511650 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_25081 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:133511609-133511653
64251 chr7 55240750 55240750 1 + G A LGG 55240738 + 55240718 55240758 41 CCTCTTGCTGCTGGTGGTGGCCCTGGGGATCGGCCTCTTCA CCTCTTGCTGCTGGTGGTGGCCCTGGGGATCGACCTCTTCA < 41bp 1 0.24074758288601 1 0.390240132808685 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55240738 chr7:55240750 nonsynonymous SNV 0.430 1 33 hm5C_associated_SNPs_25082 0 0 1 SND1 POSTAR2 ENCODE chr7:55240684-55240818
64251 chrX 149905114 149905114 1 + A T LGG 149905115 + 149905095 149905135 41 GTGCTTACCCAAATGCAGAACTTGTGTTCTTGGAGATCCAC GTGCTTACCCAAATGCAGATCTTGTGTTCTTGGAGATCCAC < 41bp 1 0.171604877038367 1 0.0352928638458252 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905115 chrX:149905114 nonsynonymous SNV 0.327 2 20 hm5C_associated_SNPs_25083 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:149905104-149905139
64251 chr6 26156726 26156726 1 + T A LGG 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCAG < 41bp 1 0.575078346632879 1 0.245409041643143 experiment 0.849843306734243 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156726 synonymous SNV . 0 40 hm5C_associated_SNPs_25085 0 0 68 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156540-26156740
64251 chr17 7476160 7476160 1 + A C LGG 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA CTGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA < 41bp 1 0.338396745887427 1 0.107684254646301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476160 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_25086 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:7476140-7476160
64251 chr1 154988753 154988753 1 + C T LGG 154988768 + 154988748 154988788 41 TCATGCCCGCACTGCCCAGCCCGCTTCCTGCACAGCTACGA TCATGTCCGCACTGCCCAGCCCGCTTCCTGCACAGCTACGA < 41bp 1 0.222212945864476 1 0.0889932215213776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988768 chr1:154988753 synonymous SNV . 0 6 hm5C_associated_SNPs_25087 0 0 1 YBX3 POSTAR2 ENCODE chr1:154988706-154988825
64251 chr11 2424084 2424084 1 + C T LGG 2424079 + 2424059 2424099 41 CCCTCACCCCCGTCAGGCCTCCTCCCAGCCACGGTGCAGCC CCCTCACCCCCGTCAGGCCTCCTCCTAGCCACGGTGCAGCC < 41bp 1 0.0621224035417725 1 0.0526239573955536 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424079 chr11:2424084 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_25088 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:2424058-2424086
64251 chr4 3319342 3319342 1 + G A LGG 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGTCCGGACCCCGAAGAGAGCCCCCCATTTGAGGCCGCTCA < 41bp 1 0.11588677410766 1 0.191078871488571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319342 nonsynonymous SNV 0.005 1 17 hm5C_associated_SNPs_25089 0 0 1 BUD13 POSTAR2 ENCODE chr4:3319341-3319401
64251 chr3 108353774 108353774 1 + C T LGG 108353763 + 108353743 108353783 41 AAAGTTGCTGTGTTTATTTCCATAAAATTTGCTGGAAAAAG AAAGTTGCTGTGTTTATTTCCATAAAATTTGTTGGAAAAAG < 41bp 1 0.181282506325386 1 0.57391232252121 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108353763 chr3:108353774 synonymous SNV . 0 32 hm5C_associated_SNPs_25090 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:108353766-108353805
64251 chr12 112321472 112321472 1 + A G LGG 112321465 + 112321445 112321485 41 TTTTACTCCAAACACCACAGCCGGACTATCCCAAAGGATAT TTTTACTCCAAACACCACAGCCGGACTGTCCCAAAGGATAT < 41bp 1 0.40518433592504 1 0.108679860830307 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321465 chr12:112321472 nonsynonymous SNV 0.999 2 28 hm5C_associated_SNPs_25091 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chr12 112321472 112321472 1 + A G LGG 112321470 + 112321450 112321490 41 CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCGAA CTCCAAACACCACAGCCGGACTGTCCCAAAGGATATGCGAA < 41bp 1 0.0637582976248679 1 0.0739153921604156 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321470 chr12:112321472 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_25092 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:112321434-112321479
64251 chrX 24545692 24545692 1 + A T LGG 24545707 + 24545687 24545727 41 TTAGAACTCAATGAGAGCGACAGTTGAACTCTATGAAGACA TTAGATCTCAATGAGAGCGACAGTTGAACTCTATGAAGACA < 41bp 1 0.0536349723862703 1 0.373997569084167 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK3 ENSG00000067992 CDS Human protein_coding chrX:24545707 chrX:24545692 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_25094 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:24545689-24545725
64251 chr8 121468835 121468835 1 + A G LGG 121468848 + 121468828 121468868 41 ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGACTCA ATGTTGTGTCTTTAGAAGATCTCAGAAATGTTATTGACTCA < 41bp 1 0.397687680225343 1 0.261404603719711 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTBP ENSG00000172167 CDS Human protein_coding chr8:121468848 chr8:121468835 synonymous SNV . 0 8 hm5C_associated_SNPs_25096 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:121468820-121468840
64251 chr8 17794714 17794714 1 + T C LGG 17794729 + 17794709 17794749 41 GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC GAAAGCGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC < 41bp 1 0.328998314840918 1 0.426050424575806 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17794729 chr8:17794714 synonymous SNV . 0 6 hm5C_associated_SNPs_25097 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:17794703-17794725
64251 chr17 73695883 73695883 1 + C T LGG 73695888 + 73695868 73695908 41 TTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAA TTTTCTGAAAGAGTTTGGAACATGTCGCCTGATGAAATCAA < 41bp 1 0.174630835671994 1 0.201193958520889 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695888 chr17:73695883 nonsynonymous SNV 0.995 1 16 hm5C_associated_SNPs_25098 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695883 73695883 1 + C T LGG 73695893 + 73695873 73695913 41 TGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCC TGAAAGAGTTTGGAACATGTCGCCTGATGAAATCAAGATCC < 41bp 1 0.726148935001069 1 0.346409797668457 experiment 0.547702129997863 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695893 chr17:73695883 nonsynonymous SNV 0.995 1 11 hm5C_associated_SNPs_25099 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695883 73695883 1 + C T LGG 73695896 + 73695876 73695916 41 AAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGC AAGAGTTTGGAACATGTCGCCTGATGAAATCAAGATCCCGC < 41bp 1 0.370187350327417 1 0.232450217008591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695896 chr17:73695883 nonsynonymous SNV 0.995 1 8 hm5C_associated_SNPs_25100 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr4 1206203 1206203 1 - G A LGG 1206214 - 1206194 1206234 41 ACGGATGGACCCTCTCCCAGCAGGTACCCTCCGGGCGTGGT ACGGATGGACCCTCTCCCAGCAGGTACCCTCTGGGCGTGGT < 41bp 1 0.62062579612734 1 0.835670471191406 experiment 0.758748407745319 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206214 chr4:1206203 nonsynonymous SNV 0.001 3 32 hm5C_associated_SNPs_25101 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:1206158-1206209
64251 chr14 100367314 100367314 1 + C G LGG 100367316 + 100367296 100367336 41 TCTGTGACATTGAATACTCTCCACGTCATTGGAATAGGTTT TCTGTGACATTGAATACTGTCCACGTCATTGGAATAGGTTT < 41bp 1 0.190884770238209 1 0.188995242118835 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML1 ENSG00000066629 CDS Human protein_coding chr14:100367316 chr14:100367314 nonsynonymous SNV 0.986 4 19 hm5C_associated_SNPs_25102 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:100367310-100367335
64251 chr20 330364 330364 1 + G A LGG 330383 + 330363 330403 41 CGCTCCTACCTGCACCTCTTCTATGAGGACTGTGCAGGCAC CACTCCTACCTGCACCTCTTCTATGAGGACTGTGCAGGCAC < 41bp 1 0.318871234550255 1 0.058598518371582 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330383 chr20:330364 nonsynonymous SNV 0.973 2 2 hm5C_associated_SNPs_25104 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr2 233674460 233674460 1 + C T LGG 233674441 + 233674421 233674461 41 CATTCCTAGGGAGAGCTGGACCAGGAACGACTGACCAGGCA CATTCCTAGGGAGAGCTGGACCAGGAACGACTGACCAGGTA < 41bp 1 0.276996482618197 1 0.189390569925308 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233674441 chr2:233674460 stopgain 0.994 1 40 hm5C_associated_SNPs_25105 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:233674421-233674490
64251 chr3 39431997 39431997 1 + C T LGG 39431995 + 39431975 39432015 41 GGCCTTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG GGCCTTTGGAAAGGGATGTCCCTTGTAAGCTGCCATCTGGG < 41bp 1 0.11226945940314 1 0.0601194500923157 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431995 chr3:39431997 nonsynonymous SNV 0.984 5 23 hm5C_associated_SNPs_25106 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:39431980-39432000
64251 chrX 55033526 55033526 1 + A T LGG 55033545 + 55033525 55033565 41 AAGCCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATG ATGCCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATG < 41bp 1 0.31467400371972 1 0.0934478044509888 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033545 chrX:55033526 nonsynonymous SNV 0.079 0 2 hm5C_associated_SNPs_25107 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:55033505-55033535
64251 chr8 28906544 28906544 1 + C T LGG 28906525 + 28906505 28906545 41 GCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACG GCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGATG < 41bp 1 0.271943756841824 1 0.116386562585831 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906525 chr8:28906544 synonymous SNV . 0 40 hm5C_associated_SNPs_25108 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906544 28906544 1 + C T LGG 28906529 + 28906509 28906549 41 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAA AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGATGGGAA < 41bp 1 0.706572629898118 1 0.566939651966095 experiment 0.586854740203765 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906529 chr8:28906544 synonymous SNV . 0 36 hm5C_associated_SNPs_25109 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906544 28906544 1 + C T LGG 28906541 + 28906521 28906561 41 CACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGA CACTCAAACAGTGATGATGTCGATGGGAATGACTACTCTGA < 41bp 1 0.558069090958307 1 0.314869523048401 experiment 0.883861818083386 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906541 chr8:28906544 synonymous SNV . 0 24 hm5C_associated_SNPs_25110 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906544 28906544 1 + C T LGG 28906553 + 28906533 28906573 41 GATGATGTCGACGGGAATGACTACTCTGAGCAGGTGAGCCC GATGATGTCGATGGGAATGACTACTCTGAGCAGGTGAGCCC < 41bp 1 0.623631884217859 1 0.178116083145142 experiment 0.752736231564281 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906553 chr8:28906544 synonymous SNV . 0 12 hm5C_associated_SNPs_25111 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr1 26772898 26772898 1 + G A LGG 26772901 + 26772881 26772921 41 AGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAAC AGCTGATTGCACAAGCTATACAGGCCACGAAGAACTACAAC < 41bp 1 0.501425696487407 1 0.640365958213806 experiment 0.997148607025186 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772901 chr1:26772898 nonsynonymous SNV 0.921 0 18 hm5C_associated_SNPs_25114 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26772866-26772902
64251 chr1 26772898 26772898 1 + G A LGG 26772908 + 26772888 26772928 41 TGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTAAG TGCACAAGCTATACAGGCCACGAAGAACTACAACAAGTAAG < 41bp 1 0.261154904703521 1 0.444241017103195 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772908 chr1:26772898 nonsynonymous SNV 0.921 0 11 hm5C_associated_SNPs_25115 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26772866-26772902
64251 chr17 1946242 1946242 1 + G A LGG 1946262 + 1946242 1946282 41 GGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAAC AGACACTGACAAAGTCATCCCCTCTCAGGAGAGTGTGCAAC < 41bp 1 0.0921800791156012 1 0.023706316947937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946262 chr17:1946242 synonymous SNV . 0 1 hm5C_associated_SNPs_25118 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:1946198-1946244
64251 chr6 32947789 32947789 1 + T A LGG 32947785 + 32947765 32947805 41 ATAATCCAAGCCAGGGAGCCCTCTTTACGTGATTCAAACCC ATAATCCAAGCCAGGGAGCCCTCTATACGTGATTCAAACCC < 41bp 1 0.449897148325417 1 0.887117445468903 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32947785 chr6:32947789 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_25119 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32947700-32947820
64251 chr3 39179140 39179140 1 + G C LGG 39179132 + 39179112 39179152 41 AGCTGGCTCCTGCTGGCTGACATTTACTGCCAGGGCAGCAA AGCTGGCTCCTGCTGGCTGACATTTACTCCCAGGGCAGCAA < 41bp 1 0.18572103549094 1 0.175440669059753 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTC21A ENSG00000168026 CDS Human protein_coding chr3:39179132 chr3:39179140 nonsynonymous SNV 0.988 1 29 hm5C_associated_SNPs_25120 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:39179111-39179140
64251 chr16 27374364 27374364 1 + C A LGG 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGATGCAGCC < 41bp 1 0.65627617333054 1 0.476476460695267 experiment 0.68744765333892 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374364 nonsynonymous SNV 0.001 2 34 hm5C_associated_SNPs_25121 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr11 111835363 111835363 1 + C T LGG 111835377 + 111835357 111835397 41 GATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGAT GATCTCTGGGATGGGGTGATCCTGGCATATCTCATCGAGAT < 41bp 1 0.444861243538977 1 0.391280651092529 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111835377 chr11:111835363 nonsynonymous SNV 0.998 4 7 hm5C_associated_SNPs_25123 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:111835357-111835393
64251 chr6 26204972 26204972 1 + G C LGG 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTCCCATCCGGCGCCTTGCTCGTCGCGG < 41bp 1 0.55990920082231 1 0.87750244140625 experiment 0.880181598355381 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204972 nonsynonymous SNV 0.003 0 16 hm5C_associated_SNPs_25124 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26204945-26204972
64251 chr17 14095349 14095349 1 + G C LGG 14095330 + 14095310 14095350 41 TTGCTAGCTGTGTCCTTTGCCACTTGTTGTGCTGTTCCGGG TTGCTAGCTGTGTCCTTTGCCACTTGTTGTGCTGTTCCGCG < 41bp 1 0.350265373508065 1 0.878211736679077 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control COX10 ENSG00000006695 CDS Human protein_coding chr17:14095330 chr17:14095349 nonsynonymous SNV 0.725 5 40 hm5C_associated_SNPs_25125 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:14095331-14095361
64251 chr5 54654435 54654435 1 + G A LGG 54654434 + 54654414 54654454 41 AATACATTCAGATGTCTGGTCGTGCTGGAAGGAGAGGAATG AATACATTCAGATGTCTGGTCATGCTGGAAGGAGAGGAATG < 41bp 1 0.180805525191863 1 0.0550134778022766 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54654434 chr5:54654435 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_25126 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr5:54654419-54654471
64251 chr7 131128404 131128404 1 + T C LGG 131128390 + 131128370 131128410 41 GTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCT GTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGCAATGCT < 41bp 1 0.744823642867412 1 0.727968573570251 experiment 0.510352714265177 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131128390 chr7:131128404 synonymous SNV . 0 35 hm5C_associated_SNPs_25131 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr7:131128364-131128447
64251 chr21 17250117 17250117 1 + A G LGG 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAGTTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG < 41bp 1 0.491802562524476 1 0.331871449947357 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250117 synonymous SNV . 0 7 hm5C_associated_SNPs_25132 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chr1 46295175 46295175 1 + G A LGG 46295193 + 46295173 46295213 41 TCGTCAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCA TCATCAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCA < 41bp 1 0.31139499478214 1 0.219194740056992 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAST2 ENSG00000086015 CDS Human protein_coding chr1:46295193 chr1:46295175 synonymous SNV . 0 3 hm5C_associated_SNPs_25134 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:46295143-46295183
64251 chr22 38258980 38258980 1 + G A LGG 38258983 + 38258963 38259003 41 GTTTTCTTTACAGGGGGGACCTTCCTTGGAGCAGAGGTTTG GTTTTCTTTACAGGGGGAACCTTCCTTGGAGCAGAGGTTTG < 41bp 1 0.100843687617255 1 0.376787066459656 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38258983 chr22:38258980 nonsynonymous SNV 0.992 2 18 hm5C_associated_SNPs_25135 0 0 14 U2AF2 POSTAR2 GSE83923,CSM2221659 chr22:38258960-38258980
64251 chr19 36572456 36572456 1 + A T LGG 36572466 + 36572446 36572486 41 CACTGGCAGAAAAACATCTTCAGCAATGTGAGTGGCTTCCT CACTGGCAGATAAACATCTTCAGCAATGTGAGTGGCTTCCT < 41bp 1 0.543731982137214 1 0.291470855474472 experiment 0.912536035725572 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36572466 chr19:36572456 nonsynonymous SNV 0.977 3 11 hm5C_associated_SNPs_25136 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36572383-36572460
64251 chr17 25937180 25937180 1 + G A LGG 25937195 + 25937175 25937215 41 GACGAGGATCAGCTGCCATTCTCCAAAGCTGCTGATGTCTA GACGAAGATCAGCTGCCATTCTCCAAAGCTGCTGATGTCTA < 41bp 1 0.784966844248631 1 0.9765704870224 experiment 0.430066311502737 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control KSR1 ENSG00000141068 CDS Human protein_coding chr17:25937195 chr17:25937180 synonymous SNV . 0 6 hm5C_associated_SNPs_25137 0 0 3 BUD13 POSTAR2 ENCODE chr17:25937167-25937254
64251 chr1 16261678 16261678 1 + G A LGG 16261698 + 16261678 16261718 41 GCTCACGCCCCACCACCCTCCTGCTCTGCCCAGCAAACTGC ACTCACGCCCCACCACCCTCCTGCTCTGCCCAGCAAACTGC < 41bp 1 0.242516092777441 1 0.124398410320282 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261698 chr1:16261678 synonymous SNV . 0 1 hm5C_associated_SNPs_25140 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:16261646-16261679
64251 chr5 131940537 131940537 1 + A G LGG 131940539 + 131940519 131940559 41 ATCGTAAGCTTATACAGGACCAGCAGGAACAGATTCAACAT ATCGTAAGCTTATACAGGGCCAGCAGGAACAGATTCAACAT < 41bp 1 0.647152134308749 1 0.273990511894226 experiment 0.705695731382502 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131940539 chr5:131940537 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_25141 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:131940513-131940542
64251 chr4 77661578 77661578 1 + C T LGG 77661597 + 77661577 77661617 41 CCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGG CTGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGG < 41bp 1 0.64151400269838 1 0.554791331291199 experiment 0.71697199460324 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661597 chr4:77661578 nonsynonymous SNV 0.000 0 2 hm5C_associated_SNPs_25142 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:77661536-77661589
64251 chr4 77661578 77661578 1 + C T LGG 77661598 + 77661578 77661618 41 CGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGC TGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGC < 41bp 1 0.615035526592209 1 0.71822601556778 experiment 0.769928946815583 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661598 chr4:77661578 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_25143 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:77661536-77661589
64251 chr4 53579476 53579476 1 + T G LGG 53579457 + 53579437 53579477 41 AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTCTC AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTCGC < 41bp 1 0.721245677072755 1 0.778771638870239 experiment 0.55750864585449 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579457 chr4:53579476 . . 0 40 hm5C_associated_SNPs_25144 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579475 + 53579455 53579495 41 CACAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGA CACAGAAGGGTAAAGTAAGTCGCCATAAAACCCAGAGAAGA < 41bp 1 0.706377333827986 1 0.790135979652405 experiment 0.587245332344028 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579475 chr4:53579476 . . 0 22 hm5C_associated_SNPs_25145 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579477 + 53579457 53579497 41 CAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGA CAGAAGGGTAAAGTAAGTCGCCATAAAACCCAGAGAAGAGA < 41bp 1 0.114352593915279 1 0.106504619121552 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579477 chr4:53579476 . . 0 20 hm5C_associated_SNPs_25146 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579478 + 53579458 53579498 41 AGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGAC AGAAGGGTAAAGTAAGTCGCCATAAAACCCAGAGAAGAGAC < 41bp 1 0.279689546508079 1 0.20945742726326 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579478 chr4:53579476 . . 0 19 hm5C_associated_SNPs_25147 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579485 + 53579465 53579505 41 TAAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAG TAAAGTAAGTCGCCATAAAACCCAGAGAAGAGACTGGAAAG < 41bp 1 0.391286695865618 1 0.264855831861496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579485 chr4:53579476 . . 0 12 hm5C_associated_SNPs_25148 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579486 + 53579466 53579506 41 AAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGC AAAGTAAGTCGCCATAAAACCCAGAGAAGAGACTGGAAAGC < 41bp 1 0.571550221661269 1 0.401114225387573 experiment 0.856899556677462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579486 chr4:53579476 . . 0 11 hm5C_associated_SNPs_25149 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579476 53579476 1 + T G LGG 53579487 + 53579467 53579507 41 AAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGCT AAGTAAGTCGCCATAAAACCCAGAGAAGAGACTGGAAAGCT < 41bp 1 0.426118435380475 1 0.431349039077759 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579487 chr4:53579476 . . 0 10 hm5C_associated_SNPs_25150 0 0 35 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr11 67046685 67046685 1 + C G LGG 67046676 + 67046656 67046696 41 CACTGTTGCCTTCAGGGTACCTGCTCTTCCGAGACTTCTGC CACTGTTGCCTTCAGGGTACCTGCTCTTCGGAGACTTCTGC < 41bp 1 0.206878153396236 1 0.0697354972362518 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67046676 chr11:67046685 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_25153 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr11:67046680-67046700
64251 chr10 102112184 102112184 1 + C T LGG 102112188 + 102112168 102112208 41 CTCATCGTCTGTGGAGCCACCGCTCTTACAAAGCTCGGCTG CTCATCGTCTGTGGAGTCACCGCTCTTACAAAGCTCGGCTG < 41bp 1 0.441756228714331 1 0.537870049476624 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102112188 chr10:102112184 synonymous SNV . 0 17 hm5C_associated_SNPs_25156 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:102112134-102112187
64251 chr5 169127065 169127065 1 + C T LGG 169127059 + 169127039 169127079 41 TGCTGGTGGGTGACATCATTCAGATTCGCAAGGACTATCCA TGCTGGTGGGTGACATCATTCAGATTTGCAAGGACTATCCA < 41bp 1 0.508868268271802 1 0.748930275440216 experiment 0.982263463456396 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127059 chr5:169127065 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_25159 0 0 3 DDX24 POSTAR2 ENCODE chr5:169127026-169127118
64251 chr5 37000657 37000657 1 + C T LGG 37000659 + 37000639 37000679 41 GAAGATTATTCTCCTCCTCCCAGCCTTAGTGAGGGTAATTC GAAGATTATTCTCCTCCTTCCAGCCTTAGTGAGGGTAATTC < 41bp 1 0.159794093947006 1 0.058546245098114 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:37000659 chr5:37000657 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_25160 1 0 5 AGGF1 POSTAR2 ENCODE chr5:37000563-37000675
64251 chr6 145149966 145149966 1 + G C LGG 145149979 + 145149959 145149999 41 TCTCACTGATAGCAGCTCCACCACAGGAAGTGTGTAAGTAA TCTCACTCATAGCAGCTCCACCACAGGAAGTGTGTAAGTAA < 41bp 1 0.109151809972124 1 0.110531508922577 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:145149979 chr6:145149966 nonsynonymous SNV 0.908 3 8 hm5C_associated_SNPs_25161 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:145149949-145149979
64251 chr16 1889339 1889339 1 - G A LGG 1889321 - 1889301 1889341 41 TGCTGATTGATCTGACTGATCACACAGGCACCCTTCATTCC TGTTGATTGATCTGACTGATCACACAGGCACCCTTCATTCC < 41bp 1 0.554898005606882 1 0.043267548084259 experiment 0.890203988786235 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MEIOB ENSG00000162039 CDS Human protein_coding chr16:1889321 chr16:1889339 synonymous SNV . 0 3 hm5C_associated_SNPs_25162 0 0 3 DDX55 POSTAR2 ENCODE chr16:1889324-1889375
64251 chr11 118344558 118344558 1 + A G LGG 118344564 + 118344544 118344584 41 AGAGAAAAGGAAAAAGGGATCAGAAATTCAGAGTAGTTCTG AGAGAAAAGGAAAAGGGGATCAGAAATTCAGAGTAGTTCTG < 41bp 1 0.335777477971847 1 0.611525177955627 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344564 chr11:118344558 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_25166 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:118344554-118344575
64251 chrX 73047032 73047032 1 - C T LGG 73047047 - 73047027 73047067 41 TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAAGCTGC < 41bp 1 0.0973007297168797 1 0.0700969696044922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047047 chrX:73047032 . . 0 36 hm5C_associated_SNPs_25169 0 0 94 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047020-73047040
64251 chrX 205505 205505 1 + G A LGG 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGCACCCTGTCGTGCTGAA < 41bp 1 0.404111170650568 1 0.0755820274353027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205505 nonsynonymous SNV 0.006 0 26 hm5C_associated_SNPs_25171 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205490-205510
64251 chr15 41192203 41192203 1 + G T LGG 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCCTAGATGTCTGGCGCACCTA < 41bp 1 0.108075605035929 1 0.332599967718124 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192203 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_25172 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr15 41192203 41192203 1 + G T LGG 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCCTAGATGTCTGGCGCACCTAT < 41bp 1 0.733637139143572 1 0.796593070030212 experiment 0.532725721712855 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192203 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_25173 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr2 135180442 135180442 1 + C G LGG 135180429 + 135180409 135180449 41 CGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGG CGGGCGGCCACATGTGTGGACTGTTGACCTCAAGAATCAGG < 41bp 1 0.0674613006995411 1 0.0212928950786591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135180429 chr2:135180442 nonsynonymous SNV 0.978 1 34 hm5C_associated_SNPs_25175 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:135180442-135180443
64251 chrX 153608123 153608123 1 + C T LGG 153608138 + 153608118 153608158 41 CCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA CCCAGTTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA < 41bp 1 0.414443541482344 1 0.154465675354004 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608138 chrX:153608123 synonymous SNV . 0 6 hm5C_associated_SNPs_25177 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chrX 153608123 153608123 1 + C T LGG 153608140 + 153608120 153608160 41 CAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA CAGTTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA < 41bp 1 0.228703760920449 1 0.104846775531769 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608140 chrX:153608123 synonymous SNV . 0 4 hm5C_associated_SNPs_25178 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr15 40509802 40509802 1 + C T LGG 40509796 + 40509776 40509816 41 GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGT GTGCAGCTGGATGTTTTTACCCTCAGTGGCTTTCGGACTGT < 41bp 1 0.414596631448073 1 0.0950810015201569 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509796 chr15:40509802 synonymous SNV . 0 27 hm5C_associated_SNPs_25179 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr5 71493378 71493378 1 + G A LGG 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACACAGCCCGCCCCTCATTGGATC < 41bp 1 0.203311577756546 1 0.317157804965973 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493378 nonsynonymous SNV 0.834 3 20 hm5C_associated_SNPs_25181 0 0 13 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:71493342-71493381
64251 chr5 71493378 71493378 1 + G A LGG 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACACAGCCCGCCCCTCATTGGATCCGAG < 41bp 1 0.0381801269774943 1 0.102522403001785 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493378 nonsynonymous SNV 0.834 3 16 hm5C_associated_SNPs_25182 0 0 13 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:71493342-71493381
64251 chr1 235543460 235543460 1 + G C LGG 235543456 + 235543436 235543476 41 TTTTGCTGGTGTTGTCCCTCCCGTGGCAGGTAAGCAATTAT TTTTGCTGGTGTTGTCCCTCCCGTCGCAGGTAAGCAATTAT < 41bp 1 0.0584049547139048 1 0.472266525030136 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235543456 chr1:235543460 synonymous SNV . 0 25 hm5C_associated_SNPs_25185 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235543435-235543465
64251 chr8 25181376 25181376 1 + C T LGG 25181381 + 25181361 25181401 41 CAGCCAGAGATAAATCGGAGCGAGCATTTGGGGTGGCCTTC CAGCCAGAGATAAATTGGAGCGAGCATTTGGGGTGGCCTTC < 41bp 1 0.180217995711311 1 0.493649005889893 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25181381 chr8:25181376 nonsynonymous SNV 0.968 3 16 hm5C_associated_SNPs_25187 0 0 3 BUD13 POSTAR2 ENCODE chr8:25181362-25181449
64251 chr9 138378948 138378948 1 + C T LGG 138378942 + 138378922 138378962 41 TCAGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGG TCAGAAGTTCAGGCAGAGGGCCCCACTGCTCTTGGGACAGG < 41bp 1 0.33985427654524 1 0.162379145622253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378942 chr9:138378948 synonymous SNV . 0 27 hm5C_associated_SNPs_25188 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378943 + 138378923 138378963 41 CAGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGG CAGAAGTTCAGGCAGAGGGCCCCACTGCTCTTGGGACAGGG < 41bp 1 0.0270449053385466 1 0.0769405364990234 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378943 chr9:138378948 synonymous SNV . 0 26 hm5C_associated_SNPs_25189 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378944 + 138378924 138378964 41 AGAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGGG AGAAGTTCAGGCAGAGGGCCCCACTGCTCTTGGGACAGGGG < 41bp 1 0.0454228310955122 1 0.0883797407150269 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378944 chr9:138378948 synonymous SNV . 0 25 hm5C_associated_SNPs_25190 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378945 + 138378925 138378965 41 GAAGTTCAGGCAGAGGGCCCCACCGCTCTTGGGACAGGGGG GAAGTTCAGGCAGAGGGCCCCACTGCTCTTGGGACAGGGGG < 41bp 1 0.163377433150508 1 0.1592658162117 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378945 chr9:138378948 synonymous SNV . 0 24 hm5C_associated_SNPs_25191 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378966 + 138378946 138378986 41 ACCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT ACTGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT < 41bp 1 0.104247516457421 1 0.118306219577789 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378966 chr9:138378948 synonymous SNV . 0 3 hm5C_associated_SNPs_25192 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378967 + 138378947 138378987 41 CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG CTGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG < 41bp 1 0.104890530007325 1 0.10626158118248 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378967 chr9:138378948 synonymous SNV . 0 2 hm5C_associated_SNPs_25193 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378948 138378948 1 + C T LGG 138378968 + 138378948 138378988 41 CGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT TGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT < 41bp 1 0.336494941029593 1 0.358764469623566 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378968 chr9:138378948 synonymous SNV . 0 1 hm5C_associated_SNPs_25194 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr2 113322007 113322007 1 + C T LGG 113321998 + 113321978 113322018 41 TACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGT TACAGTGAGTGCTACCCTGTCCTGCTGGATGGTGTCATGGT < 41bp 1 0.124977824475563 1 0.138773441314697 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321998 chr2:113322007 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_25195 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr2 113322007 113322007 1 + C T LGG 113321999 + 113321979 113322019 41 ACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTT ACAGTGAGTGCTACCCTGTCCTGCTGGATGGTGTCATGGTT < 41bp 1 0.629126046800462 1 0.167360931634903 experiment 0.741747906399076 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321999 chr2:113322007 nonsynonymous SNV . 0 29 hm5C_associated_SNPs_25196 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr1 82372829 82372829 1 + G A LGG 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTATGGTCGGACAGATGACAAGATTTGT < 41bp 1 0.211724365097434 1 0.279855221509933 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372829 synonymous SNV . 0 26 hm5C_associated_SNPs_25197 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr1 228362946 228362946 1 + G A LGG 228362945 + 228362925 228362965 41 TTGGCCAGGAGCTGACGGCCCGCACCCACCACATGGGCGTC TTGGCCAGGAGCTGACGGCCCACACCCACCACATGGGCGTC < 41bp 1 0.264752746310311 1 0.0550982058048248 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362945 chr1:228362946 nonsynonymous SNV 0.931 4 22 hm5C_associated_SNPs_25198 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:228362924-228362952
64251 chr10 105184818 105184818 1 + G A LGG 105184825 + 105184805 105184845 41 CCTTGGTAGAGACGGGCCACCTGGCAGCTTTCTCCCTGACC CCTTGGTAGAGACAGGCCACCTGGCAGCTTTCTCCCTGACC < 41bp 1 0.309666463168934 1 0.215901106595993 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105184825 chr10:105184818 synonymous SNV . 0 14 hm5C_associated_SNPs_25199 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:105184813-105184833
64251 chr17 7214424 7214424 1 + A T LGG 7214415 + 7214395 7214435 41 CAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGAC CAACTCATAATATGGATGTCCCCAACATCTAAAGGAATGAC < 41bp 1 0.21170309557125 1 0.120298236608505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214415 chr17:7214424 stopgain 1.000 1 30 hm5C_associated_SNPs_25201 0 0 2 GRWD1 POSTAR2 ENCODE chr17:7214420-7214441
64251 chr17 7214424 7214424 1 + A T LGG 7214416 + 7214396 7214436 41 AACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACT AACTCATAATATGGATGTCCCCAACATCTAAAGGAATGACT < 41bp 1 0.0454228624604959 1 0.109131962060928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214416 chr17:7214424 stopgain 1.000 1 29 hm5C_associated_SNPs_25202 0 0 2 GRWD1 POSTAR2 ENCODE chr17:7214420-7214441
64251 chrX 73041569 73041569 1 - A G LGG 73041549 - 73041529 73041569 41 TGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACTCACAG CGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACTCACAG < 41bp 1 0.0728524152069117 1 0.0964775681495667 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041549 chrX:73041569 . . 0 1 hm5C_associated_SNPs_25203 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041569 73041569 1 - A G LGG 73041554 - 73041534 73041574 41 AGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACT AGGCCCGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACT < 41bp 1 0.0100185084977392 1 0.0884484052658081 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041554 chrX:73041569 . . 0 6 hm5C_associated_SNPs_25204 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041569 73041569 1 - A G LGG 73041561 - 73041541 73041581 41 TAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTA TAAATGTAGGCCCGGCTGGGCTTTGACCTTTTCCGTTTTTA < 41bp 1 0.029844691405919 1 0.0431505739688873 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041561 chrX:73041569 . . 0 13 hm5C_associated_SNPs_25205 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041569 73041569 1 - A G LGG 73041566 - 73041546 73041586 41 TTCTCTAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGT TTCTCTAAATGTAGGCCCGGCTGGGCTTTGACCTTTTCCGT < 41bp 1 0.389818682342379 1 0.220942437648773 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041566 chrX:73041569 . . 0 18 hm5C_associated_SNPs_25206 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chr3 170078468 170078468 1 + T C LGG 170078471 + 170078451 170078491 41 ATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT ATTCCCAAGAAAGCATGCCGCCTACTGTATTTCTGCCTCTT < 41bp 1 0.0844520681291737 1 0.0214277505874634 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170078471 chr3:170078468 nonsynonymous SNV 0.974 4 18 hm5C_associated_SNPs_25207 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:170078461-170078500
64251 chr11 118885707 118885707 1 + C G LGG 118885708 + 118885688 118885728 41 TTAATTTTTTTTTCAGGTGCCACACCTCCCTGGATGATCCA TTAATTTTTTTTTCAGGTGGCACACCTCCCTGGATGATCCA < 41bp 1 0.0577136624859311 1 0.0465313792228699 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118885708 chr11:118885707 nonsynonymous SNV 0.992 4 20 hm5C_associated_SNPs_25208 0 0 3 GRWD1 POSTAR2 ENCODE chr11:118885702-118885768
64251 chr13 103299660 103299660 1 + G C LGG 103299672 + 103299652 103299692 41 GAACAAAAGACAGATGGGTTCAGGCGATGCCTATCCACATC GAACAAAACACAGATGGGTTCAGGCGATGCCTATCCACATC < 41bp 1 0.636497640911475 1 0.698014616966248 experiment 0.72700471817705 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103299672 chr13:103299660 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_25209 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr13:103299640-103299661
64251 chr2 160053205 160053205 1 + T C LGG 160053224 + 160053204 160053244 41 CTTGTGAGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTG CCTGTGAGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTG < 41bp 1 0.0857326199023774 1 0.0434888899326324 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160053224 chr2:160053205 synonymous SNV . 0 2 hm5C_associated_SNPs_25210 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:160053170-160053208
64251 chr7 101891755 101891755 1 + C T LGG 101891757 + 101891737 101891777 41 GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCC GAGTCAGGGCCAGGCGGGTGCCAGCGACTCACCCTCGGCCC < 41bp 1 0.322318017957702 1 0.394334614276886 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891757 chr7:101891755 synonymous SNV . 0 19 hm5C_associated_SNPs_25212 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891755 101891755 1 + C T LGG 101891758 + 101891738 101891778 41 AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCCG AGTCAGGGCCAGGCGGGTGCCAGCGACTCACCCTCGGCCCG < 41bp 1 0.761694433977044 1 0.827725052833557 experiment 0.476611132045911 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891758 chr7:101891755 synonymous SNV . 0 18 hm5C_associated_SNPs_25213 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 40133900 40133900 1 + C T LGG 40133901 + 40133881 40133921 41 AACCAGCATGTACCCACCACCAGTTCTTCATTAACTGACCC AACCAGCATGTACCCACCATCAGTTCTTCATTAACTGACCC < 41bp 1 0.133952791655989 1 0.664786100387573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40133901 chr7:40133900 nonsynonymous SNV 0.997 0 20 hm5C_associated_SNPs_25214 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:40133900-40133920
64251 chrX 153627882 153627882 1 + T G LGG 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGAGTGTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT < 41bp 1 0.307237257244806 1 0.451980650424957 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627882 nonsynonymous SNV 0.948 3 7 hm5C_associated_SNPs_25215 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627825-153627935
64251 chr2 171822309 171822309 1 + C A LGG 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGGTCTGCCACATCTTCCTTCCATGCCT < 41bp 1 0.468973234860766 1 0.120403081178665 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822309 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_25216 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr5 54640973 54640973 1 + G A LGG 54640986 + 54640966 54641006 41 TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC TCGAGATACAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC < 41bp 1 0.489682781766038 1 0.541500568389893 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640986 chr5:54640973 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_25217 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54640946-54640980
64251 chr1 203819731 203819731 1 + C T LGG 203819733 + 203819713 203819753 41 TAAGGCAGTGGAGATGCACGCTGCTGTCATTGCCGCTGTGA TAAGGCAGTGGAGATGCATGCTGCTGTCATTGCCGCTGTGA < 41bp 1 0.699203674719282 1 0.294724971055984 experiment 0.601592650561436 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203819733 chr1:203819731 synonymous SNV . 0 19 hm5C_associated_SNPs_25218 0 0 7 FXR2 POSTAR2 GSE39682,GSM977620 chr1:203819728-203819755
64251 chr20 30822373 30822373 1 + C A LGG 30822376 + 30822356 30822396 41 CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCGGGAGCGGG CTGTGTCTCCTCCTTCAATGCCTTTGTGAAGCGGGAGCGGG < 41bp 1 0.0681135910159545 1 0.0548115074634552 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822376 chr20:30822373 nonsynonymous SNV 0.992 3 18 hm5C_associated_SNPs_25219 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:30822340-30822380
64251 chrX 41027339 41027339 1 + G A LGG 41027349 + 41027329 41027369 41 GTTTTGGATGGTGACAAAGACAGTGTTAATTGTGCAAGACA GTTTTGGATGATGACAAAGACAGTGTTAATTGTGCAAGACA < 41bp 1 0.280769381706425 1 0.259939134120941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41027349 chrX:41027339 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_25222 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41027266-41027379
64251 chr19 10886449 10886449 1 + C T LGG 10886461 + 10886441 10886481 41 CCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTT CCAGACATTGAGTACCAGATCAAGGACATGATCCTGCAGTT < 41bp 1 0.644581920194259 1 0.771790862083435 experiment 0.710836159611482 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886461 chr19:10886449 synonymous SNV . 0 9 hm5C_associated_SNPs_25223 0 0 4 DDX24 POSTAR2 ENCODE chr19:10886377-10886453
64251 chr6 126210549 126210549 1 + C A LGG 126210539 + 126210519 126210559 41 TTTCTCTTGACCCAGAGGAACGAAAGAAAGCTGAGTCACAA TTTCTCTTGACCCAGAGGAACGAAAGAAAGATGAGTCACAA < 41bp 1 0.582943672399301 1 0.620924711227417 experiment 0.834112655201397 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210539 chr6:126210549 nonsynonymous SNV 0.002 0 31 hm5C_associated_SNPs_25226 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr6:126210535-126210556
64251 chr11 71939482 71939482 1 + C A LGG 71939492 + 71939472 71939512 41 TGTGTGCGCCCTGCTTCTTCCTGTAGAGGGTGAGCGAGAGC TGTGTGCGCCATGCTTCTTCCTGTAGAGGGTGAGCGAGAGC < 41bp 1 0.63460287571873 1 0.727347135543823 experiment 0.730794248562539 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71939492 chr11:71939482 nonsynonymous SNV 0.982 4 11 hm5C_associated_SNPs_25227 0 0 1 PPIG POSTAR2 ENCODE chr11:71939482-71939541
64251 chr11 65403922 65403922 1 + G A LGG 65403903 + 65403883 65403923 41 CACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGC CACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGAC < 41bp 1 0.181860973135091 1 0.272885739803314 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403903 chr11:65403922 nonsynonymous SNV 0.944 1 40 hm5C_associated_SNPs_25228 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403922 65403922 1 + G A LGG 65403904 + 65403884 65403924 41 ACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGCT ACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGACT < 41bp 1 0.396588955470836 1 0.500965416431427 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403904 chr11:65403922 nonsynonymous SNV 0.944 1 39 hm5C_associated_SNPs_25229 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403922 65403922 1 + G A LGG 65403939 + 65403919 65403959 41 GTGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGG GTGACTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGG < 41bp 1 0.0438542601665024 1 0.294442117214203 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403939 chr11:65403922 nonsynonymous SNV 0.944 1 4 hm5C_associated_SNPs_25230 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403922 65403922 1 + G A LGG 65403940 + 65403920 65403960 41 TGGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGC TGACTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGC < 41bp 1 0.154855678447339 1 0.492737174034119 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403940 chr11:65403922 nonsynonymous SNV 0.944 1 3 hm5C_associated_SNPs_25231 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403922 65403922 1 + G A LGG 65403941 + 65403921 65403961 41 GGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCC GACTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCC < 41bp 1 0.0535277329264093 1 0.155215889215469 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403941 chr11:65403922 nonsynonymous SNV 0.944 1 2 hm5C_associated_SNPs_25232 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403922 65403922 1 + G A LGG 65403942 + 65403922 65403962 41 GCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCT ACTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCT < 41bp 1 0.0747298401801442 1 0.278334468603134 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403942 chr11:65403922 nonsynonymous SNV 0.944 1 1 hm5C_associated_SNPs_25233 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr7 116533072 116533072 1 + A G LGG 116533053 + 116533033 116533073 41 ATAATTGTTTTGCAGATGTTCGGTTACTGCTTAATAATGAC ATAATTGTTTTGCAGATGTTCGGTTACTGCTTAATAATGGC < 41bp 1 0.221532497849308 1 0.451498001813889 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116533053 chr7:116533072 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_25234 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116533050-116533086
64251 chr2 61258835 61258835 1 + G A LGG 61258852 + 61258832 61258872 41 AAAGCAGCAGGGGTGCATTTCAGTCCATTGAAAGTATTGTG AAAACAGCAGGGGTGCATTTCAGTCCATTGAAAGTATTGTG < 41bp 1 0.243109593865769 1 0.483738571405411 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX13 ENSG00000162928 CDS Human protein_coding chr2:61258852 chr2:61258835 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_25235 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:61258811-61258835
64251 chr5 10254913 10254913 1 + G T LGG 10254899 + 10254879 10254919 41 TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGAT TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCATGATGAT < 41bp 1 0.14546832391534 1 0.098592609167099 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254899 chr5:10254913 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_25236 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254913 10254913 1 + G T LGG 10254903 + 10254883 10254923 41 CAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA CAAGCTGATGGTGGAACTGTCCAAGTCTCATGATGATGAAA < 41bp 1 0.217615179456918 1 0.206953287124634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254903 chr5:10254913 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_25237 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254913 10254913 1 + G T LGG 10254909 + 10254889 10254929 41 GATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAG GATGGTGGAACTGTCCAAGTCTCATGATGATGAAATTGGAG < 41bp 1 0.41339122361855 1 0.209260493516922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254909 chr5:10254913 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_25238 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr11 65396306 65396306 1 + C T LGG 65396293 + 65396273 65396313 41 CCTTGACTGTGGCTCAGACTCGGCCATGCTGTTCGTCCAGG CCTTGACTGTGGCTCAGACTCGGCCATGCTGTTTGTCCAGG < 41bp 1 0.586252648130076 1 0.523662924766541 experiment 0.827494703739847 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65396293 chr11:65396306 synonymous SNV . 0 34 hm5C_associated_SNPs_25240 0 0 10 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65396286-65396307
64251 chr11 62655901 62655901 1 + G A LGG 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CATTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC < 41bp 1 0.396849385079757 1 0.216875493526459 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655901 synonymous SNV . 0 2 hm5C_associated_SNPs_25242 0 0 57 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:62655841-62655923
64251 chr9 91077536 91077536 1 + T C LGG 91077534 + 91077514 91077554 41 GTTACCCAGTGGAAAGGAACCGTTCTGGACCAGGTGCCTGT GTTACCCAGTGGAAAGGAACCGCTCTGGACCAGGTGCCTGT < 41bp 1 0.420306581938585 1 0.11263045668602 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077534 chr9:91077536 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_25244 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91077504-91077614
64251 chr9 91077536 91077536 1 + T C LGG 91077544 + 91077524 91077564 41 GGAAAGGAACCGTTCTGGACCAGGTGCCTGTAAATCCTTCT GGAAAGGAACCGCTCTGGACCAGGTGCCTGTAAATCCTTCT < 41bp 1 0.541444580989072 1 0.696740388870239 experiment 0.917110838021856 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077544 chr9:91077536 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_25245 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91077504-91077614
64251 chr12 71977622 71977622 1 + C A LGG 71977616 + 71977596 71977636 41 GAACATGCTCACGGGAGTCTCCAGTGCCGTGCTGGCTGGTG GAACATGCTCACGGGAGTCTCCAGTGACGTGCTGGCTGGTG < 41bp 1 0.452947408719586 1 0.601753711700439 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977616 chr12:71977622 nonsynonymous SNV 0.006 2 27 hm5C_associated_SNPs_25247 0 0 1 SND1 POSTAR2 ENCODE chr12:71977601-71977649
64251 chr10 134219521 134219521 1 + C T LGG 134219517 + 134219497 134219537 41 TCCATGGTTTTCCTTGGTGGCCGGCGCGTGTTCTTGACATC TCCATGGTTTTCCTTGGTGGCCGGTGCGTGTTCTTGACATC < 41bp 1 0.235706804942118 1 0.36384990811348 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219517 chr10:134219521 nonsynonymous SNV 0.148 3 25 hm5C_associated_SNPs_25248 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr10:134219520-134219521
64251 chr6 31604861 31604861 1 + C A LGG 31604866 + 31604846 31604886 41 CAGGATTATCAAAAACTGAGCAGCAACCTTGGGGGACCTGG CAGGATTATCAAAAAATGAGCAGCAACCTTGGGGGACCTGG < 41bp 1 0.541023844772964 1 0.414173781871796 experiment 0.917952310454072 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604866 chr6:31604861 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_25249 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:31604823-31604897
64251 chr19 808591 808591 1 + G A LGG 808586 + 808566 808606 41 CACAAGCTGCACGGGAAGCCCATCCGCATCACGCTCTCGAA CACAAGCTGCACGGGAAGCCCATCCACATCACGCTCTCGAA < 41bp 1 0.194880376030817 1 0.326999992132187 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808586 chr19:808591 nonsynonymous SNV 0.010 1 26 hm5C_associated_SNPs_25251 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:808575-808596
64251 chr6 31598957 31598957 1 + C T LGG 31598940 + 31598920 31598960 41 GAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAG GAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGTCAG < 41bp 1 0.140660094197011 1 0.446269035339355 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598940 chr6:31598957 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_25252 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31598920-31598960
64251 chr1 145440773 145440773 1 + C A LGG 145440782 + 145440762 145440802 41 ATCTGAACATCCCTGATACCCCAGAAGGTGAGCCAGACCTA ATCTGAACATCACTGATACCCCAGAAGGTGAGCCAGACCTA < 41bp 1 0.276826140113501 1 0.367423474788666 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXNIP ENSG00000117289 CDS Human other chr1:145440782 chr1:145440773 nonsynonymous SNV . 0 12 hm5C_associated_SNPs_25253 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:145440753-145440778
64251 chr1 145440773 145440773 1 + C A LGG 145440783 + 145440763 145440803 41 TCTGAACATCCCTGATACCCCAGAAGGTGAGCCAGACCTAA TCTGAACATCACTGATACCCCAGAAGGTGAGCCAGACCTAA < 41bp 1 0.347757368562334 1 0.559590756893158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXNIP ENSG00000117289 CDS Human other chr1:145440783 chr1:145440773 nonsynonymous SNV . 0 11 hm5C_associated_SNPs_25254 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:145440753-145440778
64251 chr2 233681715 233681715 1 + G T LGG 233681710 + 233681690 233681730 41 AGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAACTTGCC AGGAAGAAGAAAGGAAAAGGCGAGATGAAGAAGAACTTGCC < 41bp 1 0.789354124783776 1 0.830519914627075 experiment 0.421291750432448 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681710 chr2:233681715 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_25255 0 0 17 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681715 233681715 1 + G T LGG 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCGAGATGAAGAAGAACTTGCCCGAAGGAAACAGGTA < 41bp 1 0.118495304315412 1 0.157880991697311 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681715 nonsynonymous SNV 0.999 3 11 hm5C_associated_SNPs_25256 0 0 17 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681715 233681715 1 + G T LGG 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CGAGATGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT < 41bp 1 0.444153281091928 1 0.627355396747589 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681715 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_25257 0 0 17 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr11 108559743 108559743 1 + G A LGG 108559748 + 108559728 108559768 41 ATTCCTTTTTGAGAAGCCATCTGAAGAAGAAGAGCATTGTA ATTCCTTTTTGAGAAACCATCTGAAGAAGAAGAGCATTGTA < 41bp 1 0.605841745703966 1 0.783204257488251 experiment 0.788316508592069 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX10 ENSG00000178105 CDS Human protein_coding chr11:108559748 chr11:108559743 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_25258 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:108559703-108559753
64251 chr19 16957837 16957837 1 + G A LGG 16957840 + 16957820 16957860 41 ATGTCTGAAGAGGAGGTGTTCACCGAGGTGGCCAACCTCTT ATGTCTGAAGAGGAGGTATTCACCGAGGTGGCCAACCTCTT < 41bp 1 0.713786776470645 1 0.0763708055019379 experiment 0.572426447058709 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SIN3B ENSG00000127511 CDS Human protein_coding chr19:16957840 chr19:16957837 synonymous SNV . 0 18 hm5C_associated_SNPs_25275 0 0 4 DDX24 POSTAR2 ENCODE chr19:16957833-16957891
64251 chr10 51584762 51584762 1 + G T LGG 51584778 + 51584758 51584798 41 AAAAGGTTGGAGATCAAGAGCTTCCTGATCAAGATGAGATG AAAATGTTGGAGATCAAGAGCTTCCTGATCAAGATGAGATG < 41bp 1 0.0830636934515649 1 0.072115033864975 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCOA4 ENSG00000138293 CDS Human other chr10:51584778 chr10:51584762 nonsynonymous SNV . 0 5 hm5C_associated_SNPs_25276 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:51584736-51584768
64251 chr1 92769570 92769570 1 + G A LGG 92769553 + 92769533 92769573 41 GGGGAGGTTCATTACACCTGCTCACTACAGTGATGTCGTGG GGGGAGGTTCATTACACCTGCTCACTACAGTGATGTCATGG < 41bp 1 0.18427650143622 1 0.0696191489696503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769553 chr1:92769570 nonsynonymous SNV 0.795 3 38 hm5C_associated_SNPs_25279 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:92769539-92769572
64251 chr5 10254886 10254886 1 + G A LGG 10254899 + 10254879 10254919 41 TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGAT TTGCCAAACTGATGGTGGAACTGTCCAAGTCTCAGGATGAT < 41bp 1 0.118936876731918 1 0.0928276777267456 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254899 chr5:10254886 synonymous SNV . 0 8 hm5C_associated_SNPs_25280 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254886 10254886 1 + G A LGG 10254903 + 10254883 10254923 41 CAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA CAAACTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA < 41bp 1 0.229455595295081 1 0.205506205558777 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254903 chr5:10254886 synonymous SNV . 0 4 hm5C_associated_SNPs_25281 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr19 49993743 49993743 1 + G A LGG 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGACTTTCCTCCGCAAGCGGATGAACACC < 41bp 1 0.797947661577864 1 0.274920880794525 experiment 0.404104676844272 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993743 nonsynonymous SNV 1.000 0 15 hm5C_associated_SNPs_25282 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr12 72274292 72274292 1 + G A LGG 72274307 + 72274287 72274327 41 AGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACG AGAAAAAGGTCATCGAGGATCAGAACATCTGAACAGTTACG < 41bp 1 0.689906306004563 1 0.530162572860718 experiment 0.620187387990873 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72274307 chr12:72274292 nonsynonymous SNV 0.923 1 6 hm5C_associated_SNPs_25283 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72274235-72274335
64251 chr16 3021868 3021868 1 + C T LGG 3021876 + 3021856 3021896 41 GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCG GCACCTGCTGAGTGTGGGCTCCATCCTGCAGCTGCACGCCG < 41bp 1 0.106486553753558 1 0.148701906204224 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021876 chr16:3021868 synonymous SNV . 0 13 hm5C_associated_SNPs_25285 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:3021832-3021870
64251 chr12 989970 989970 1 + T G LGG 989989 + 989969 990009 41 ATTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG AGTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG < 41bp 1 0.120599746814816 1 0.142801105976105 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:989989 chr12:989970 nonsynonymous SNV 0.995 1 2 hm5C_associated_SNPs_25286 0 0 3 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr12:989969-989990
64251 chr7 148876569 148876569 1 + C T LGG 148876555 + 148876535 148876575 41 AGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGG AGCACCTGCTGAACCACCGGCGGCTGCACACAGGTGAGCGG < 41bp 1 0.423220739956885 1 0.695051789283752 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876555 chr7:148876569 synonymous SNV . 0 35 hm5C_associated_SNPs_25287 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148876565-148876591
64251 chr11 74329667 74329667 1 + C A LGG 74329670 + 74329650 74329690 41 AGTTTGAGCAGTCACATCTTCACATGTCAAGTGAGACACAA AGTTTGAGCAGTCACATATTCACATGTCAAGTGAGACACAA < 41bp 1 0.679913977492956 1 0.0844721794128418 experiment 0.640172045014088 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329670 chr11:74329667 nonsynonymous SNV 0.846 0 18 hm5C_associated_SNPs_25288 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:74329649-74329675
64251 chr1 109804139 109804139 1 + G A LGG 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTACCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG < 41bp 1 0.245568266834904 1 0.292142450809479 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804139 nonsynonymous SNV 0.943 1 4 hm5C_associated_SNPs_25289 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr19 8528381 8528381 1 + G A LGG 8528388 + 8528368 8528408 41 GCTTCCTCCAAAGGGATGTGCGTAAGTATCGTCTAGTTACT GCTTCCTCCAAAGAGATGTGCGTAAGTATCGTCTAGTTACT < 41bp 1 0.307837204468029 1 0.0474254488945007 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8528388 chr19:8528381 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_25304 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:8528376-8528386
64251 chr19 17615413 17615413 1 + G A LGG 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCACCCT < 41bp 1 0.286618898098927 1 0.129344880580902 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615413 nonsynonymous SNV 0.003 0 37 hm5C_associated_SNPs_25306 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr19 11145688 11145688 1 + C T LGG 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAT < 41bp 1 0.0725681899386386 1 0.0953952968120575 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145688 synonymous SNV . 0 41 hm5C_associated_SNPs_25307 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145688 11145688 1 + C T LGG 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGATG < 41bp 1 0.225261120119233 1 0.137235671281815 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145688 synonymous SNV . 0 40 hm5C_associated_SNPs_25308 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145688 11145688 1 + C T LGG 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGATGACG < 41bp 1 0.542106805168064 1 0.523233950138092 experiment 0.915786389663871 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145688 synonymous SNV . 0 37 hm5C_associated_SNPs_25309 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145688 11145688 1 + C T LGG 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGATGACGCGGAGGTGGAGCGGCTGAC < 41bp 1 0.768904058057162 1 0.690637290477753 experiment 0.462191883885675 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145688 synonymous SNV . 0 18 hm5C_associated_SNPs_25310 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145688 11145688 1 + C T LGG 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGATGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.469505521751242 1 0.547757148742676 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145688 synonymous SNV . 0 5 hm5C_associated_SNPs_25311 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145688 11145688 1 + C T LGG 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ATGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.226009814298357 1 0.367678433656693 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145688 synonymous SNV . 0 2 hm5C_associated_SNPs_25312 1 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr5 10387155 10387155 1 + G A LGG 10387150 + 10387130 10387170 41 CTGGCTCCGTGAGCTCACTACTGACGCTGCCATTAGATATG CTGGCTCCGTGAGCTCACTACTGACACTGCCATTAGATATG < 41bp 1 0.21533349571535 1 0.157603472471237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10387150 chr5:10387155 synonymous SNV . 0 26 hm5C_associated_SNPs_25313 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10387142-10387165
64251 chr2 241533978 241533978 1 + G T LGG 241533998 + 241533978 241534018 41 GGTAGATGCAGCGGTAGCATCTGAGCTCCTGTCCCAGCTCC TGTAGATGCAGCGGTAGCATCTGAGCTCCTGTCCCAGCTCC < 41bp 1 0.755761813813167 1 0.770394206047058 experiment 0.488476372373666 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241533998 chr2:241533978 nonsynonymous SNV 0.196 0 1 hm5C_associated_SNPs_25314 0 0 7 BUD13 POSTAR2 ENCODE chr2:241533957-241534015
64251 chr10 17277379 17277379 1 + A T LGG 17277369 + 17277349 17277389 41 TTGCCACCTACAGGAAGCTGCTGGAAGGCGAGGAGAGCAGG TTGCCACCTACAGGAAGCTGCTGGAAGGCGTGGAGAGCAGG < 41bp 1 0.642247602596448 1 0.64296019077301 experiment 0.715504794807105 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277369 chr10:17277379 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_25315 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr10 17277379 17277379 1 + A T LGG 17277386 + 17277366 17277406 41 CTGCTGGAAGGCGAGGAGAGCAGGTAGGGAACTCAGACTTG CTGCTGGAAGGCGTGGAGAGCAGGTAGGGAACTCAGACTTG < 41bp 1 0.662005024789292 1 0.626855671405792 experiment 0.675989950421416 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277386 chr10:17277379 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_25316 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr4 57340537 57340537 1 + A G LGG 57340545 + 57340525 57340565 41 ACCAGGCCATGAAAATCCTACAAAAAGCTGAAGGTTGGAAG ACCAGGCCATGAGAATCCTACAAAAAGCTGAAGGTTGGAAG < 41bp 1 0.596141925015775 1 0.347072392702103 experiment 0.80771614996845 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340545 chr4:57340537 nonsynonymous SNV 0.999 0 13 hm5C_associated_SNPs_25317 0 0 4 GRWD1 POSTAR2 ENCODE chr4:57340494-57340538
64251 chr4 1332393 1332393 1 + C T LGG 1332384 + 1332364 1332404 41 CCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAA CCGCCCATGATGCTGCCCAACGGCTACGTTTACGGCTACAA < 41bp 1 0.560692806342728 1 0.224991589784622 experiment 0.878614387314544 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAEA ENSG00000090316 CDS Human protein_coding chr4:1332384 chr4:1332393 synonymous SNV . 0 30 hm5C_associated_SNPs_25318 0 0 2 PPIG POSTAR2 ENCODE chr4:1332340-1332404
64251 chr17 7752261 7752261 1 + C T LGG 7752242 + 7752222 7752262 41 TACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCG TACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGTG < 41bp 1 0.558804021216978 1 0.293031871318817 experiment 0.882391957566045 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752242 chr17:7752261 synonymous SNV . 0 40 hm5C_associated_SNPs_25319 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr17 7752261 7752261 1 + C T LGG 7752243 + 7752223 7752263 41 ACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCGA ACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGTGA < 41bp 1 0.628961526013875 1 0.646691679954529 experiment 0.74207694797225 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752243 chr17:7752261 synonymous SNV . 0 39 hm5C_associated_SNPs_25320 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr17 7752261 7752261 1 + C T LGG 7752281 + 7752261 7752301 41 CGAAGAGCCAGTCCCGGGCCCCATGACCCCCACCCAACCGC TGAAGAGCCAGTCCCGGGCCCCATGACCCCCACCCAACCGC < 41bp 1 0.0994183595996389 1 0.106159865856171 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752281 chr17:7752261 synonymous SNV . 0 1 hm5C_associated_SNPs_25321 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr17 29554597 29554597 1 + T C LGG 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATGGGAACAAGCAACAAAGCTAATCCTTAACTACCCAAAA < 41bp 1 0.12892473629488 1 0.152569055557251 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554597 synonymous SNV . 0 35 hm5C_associated_SNPs_25322 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29554582-29554612
64251 chr17 17698006 17698006 1 + G A LGG 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGCCTACACGGCAGTCTGCCGCTCAACAGCTTCTCCAAG < 41bp 1 0.064030395670582 1 0.0154446661472321 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17698006 nonsynonymous SNV 0.800 3 27 hm5C_associated_SNPs_25323 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697983-17698008
64251 chr10 104157744 104157744 1 + C T LGG 104157753 + 104157733 104157773 41 CATAGAATCTCCGGGGGCATCAAACCTGAAGATTTCTCGAA CATAGAATCTCTGGGGGCATCAAACCTGAAGATTTCTCGAA < 41bp 1 0.205161979605119 1 0.595626294612885 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104157753 chr10:104157744 nonsynonymous SNV 0.143 4 12 hm5C_associated_SNPs_25326 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:104157740-104157760
64251 chr1 220928369 220928369 1 + A G LGG 220928383 + 220928363 220928403 41 TCATTTATGAGAATAACTGCCTGATCTTCAGGGCTCCAGAC TCATTTGTGAGAATAACTGCCTGATCTTCAGGGCTCCAGAC < 41bp 1 0.414486244853669 1 0.074878454208374 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928383 chr1:220928369 nonsynonymous SNV 0.138 0 7 hm5C_associated_SNPs_25327 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220928362-220928381
64251 chr1 220928369 220928369 1 + A G LGG 220928388 + 220928368 220928408 41 TATGAGAATAACTGCCTGATCTTCAGGGCTCCAGACATGGA TGTGAGAATAACTGCCTGATCTTCAGGGCTCCAGACATGGA < 41bp 1 0.759123090884019 1 0.137164890766144 experiment 0.481753818231963 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928388 chr1:220928369 nonsynonymous SNV 0.138 0 2 hm5C_associated_SNPs_25328 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220928362-220928381
64251 chr18 13095650 13095650 1 + G T LGG 13095653 + 13095633 13095673 41 CGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT CGTGGACTGTCCTACCCTAGCACTTGATTCTGGTAGCTCCT < 41bp 1 0.245721152103175 1 0.168605268001556 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095653 chr18:13095650 stopgain 0.029 1 18 hm5C_associated_SNPs_25330 0 0 3 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr18 13095650 13095650 1 + G T LGG 13095655 + 13095635 13095675 41 TGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC TGGACTGTCCTACCCTAGCACTTGATTCTGGTAGCTCCTTC < 41bp 1 0.58050774477014 1 0.233888477087021 experiment 0.83898451045972 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095655 chr18:13095650 stopgain 0.029 1 16 hm5C_associated_SNPs_25331 0 0 3 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr19 5691360 5691360 1 + G A LGG 5691353 + 5691333 5691373 41 CTGACCAAACACACCAAGTTCGTGCGGGACATGATTCGGGA CTGACCAAACACACCAAGTTCGTGCGGAACATGATTCGGGA < 41bp 1 0.35858425936275 1 0.398599535226822 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691353 chr19:5691360 nonsynonymous SNV 1.000 0 28 hm5C_associated_SNPs_25332 0 0 72 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5691320-5691360
64251 chr19 5691360 5691360 1 + G A LGG 5691357 + 5691337 5691377 41 CCAAACACACCAAGTTCGTGCGGGACATGATTCGGGAGGTG CCAAACACACCAAGTTCGTGCGGAACATGATTCGGGAGGTG < 41bp 1 0.647098879569264 1 0.169834107160568 experiment 0.705802240861472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691357 chr19:5691360 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_25333 0 0 72 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5691320-5691360
64251 chr9 135926284 135926284 1 + G T LGG 135926282 + 135926262 135926302 41 AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC AGGATGAGGAGGTGCCCAAGCATCCACTGGAGGCTGCAGCC < 41bp 1 0.321588302395044 1 0.486777514219284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308;ENSG00000148308 exonic;splicing Human other chr9:135926282 chr9:135926284 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_25334 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr9:135926269-135926290
64251 chr9 135926284 135926284 1 + G T LGG 135926295 + 135926275 135926315 41 GCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGA GCCCAAGCATCCACTGGAGGCTGCAGCCCAGACGTGGAGGA < 41bp 1 0.771982384283609 1 0.376391440629959 experiment 0.456035231432782 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308;ENSG00000148308 exonic;splicing Human other chr9:135926295 chr9:135926284 nonsynonymous SNV 0.007 1 10 hm5C_associated_SNPs_25335 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr9:135926269-135926290
64251 chr9 135926284 135926284 1 + G T LGG 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC ATCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC < 41bp 1 0.495674866516457 1 0.282900631427765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308;ENSG00000148308 exonic;splicing Human other chr9:135926303 chr9:135926284 nonsynonymous SNV 0.007 1 2 hm5C_associated_SNPs_25336 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr9:135926269-135926290
64251 chrX 41075235 41075235 1 + A T LGG 41075229 + 41075209 41075249 41 CTAAAGCGATTTGACTATGACTGGGAAAGAGAATGTGCAAT CTAAAGCGATTTGACTATGACTGGGATAGAGAATGTGCAAT < 41bp 1 0.383171982054522 1 0.0642364025115967 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41075229 chrX:41075235 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_25337 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41075183-41075254
64251 chr18 13056632 13056632 1 + C A LGG 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCATGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT < 41bp 1 0.104419004983975 1 0.24454927444458 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056632 nonsynonymous SNV 0.030 3 3 hm5C_associated_SNPs_25338 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr7 139107024 139107024 1 + A C LGG 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAAGATAAGAAGCGGTCCTATGAGCGTGCTAAT < 41bp 1 0.205460849968512 1 0.573339641094208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107024 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_25339 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107024 139107024 1 + A C LGG 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGAAGCGGTCCTATGAGCGTGCTAATGGCA < 41bp 1 0.077618529177359 1 0.135484248399734 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107024 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_25340 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107024 139107024 1 + A C LGG 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGCGGTCCTATGAGCGTGCTAATGGCAG < 41bp 1 0.189715349403335 1 0.0752732753753662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107024 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_25341 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107024 139107024 1 + A C LGG 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGCGGTCCTATGAGCGTGCTAATGGCAGATCAGAAGACA < 41bp 1 0.314538419634278 1 0.144409507513046 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107024 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_25342 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107024 139107024 1 + A C LGG 139107035 + 139107015 139107055 41 TCCTATGAGAGTGCTAATGGCAGATCAGAAGACAGGAGGAG TCCTATGAGCGTGCTAATGGCAGATCAGAAGACAGGAGGAG < 41bp 1 0.562158995135379 1 0.329131543636322 experiment 0.875682009729242 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107035 chr7:139107024 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_25343 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr5 173378897 173378897 1 + G A LGG 173378893 + 173378873 173378913 41 ATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTT ATGGTTCACAGCCACTTGACCCACAAAAAACTATATTTGTT < 41bp 1 0.258175637715614 1 0.157445728778839 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173378893 chr5:173378897 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_25344 0 0 1 BUD13 POSTAR2 ENCODE chr5:173378803-173378898
64251 chr6 30889947 30889947 1 + C A LGG 30889943 + 30889923 30889963 41 TCACTTTTGGAAACGGGCAGCGACCTTCTGCTGTTCTGGGT TCACTTTTGGAAACGGGCAGCGACATTCTGCTGTTCTGGGT < 41bp 1 0.550087259788346 1 0.313961923122406 experiment 0.899825480423308 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30889943 chr6:30889947 nonsynonymous SNV 0.749 1 25 hm5C_associated_SNPs_25345 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:30889931-30889979
64251 chr11 70275272 70275272 1 + G A LGG 70275262 + 70275242 70275282 41 GGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG GGAGAGAGCCCAGCGGATGGCCAAGGAGCGACAGGAGCAGG < 41bp 1 0.480722762823409 1 0.449950158596039 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275262 chr11:70275272 synonymous SNV . 0 31 hm5C_associated_SNPs_25346 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70275254-70275275
64251 chr1 87208030 87208030 1 + C A LGG 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTCTCCTTCCAACCTCAGTGACATTAAGGAGTGTAG < 41bp 1 0.305514326398376 1 0.32854700088501 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208030 nonsynonymous SNV 0.902 0 28 hm5C_associated_SNPs_25347 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:87208023-87208055
64251 chr19 17615406 17615406 1 + C T LGG 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGTGCCTTCGCCCT < 41bp 1 0.271023396211044 1 0.137223124504089 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615406 synonymous SNV . 0 30 hm5C_associated_SNPs_25348 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr16 29989110 29989110 1 + G A LGG 29989108 + 29989088 29989128 41 GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA GCCACCATGCCAGCTGGGGGCCAGGCCGGGAGCCTGAAGGA < 41bp 1 0.412555662510095 1 0.477641195058823 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989108 chr16:29989110 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_25349 0 0 2 SF3B1 POSTAR2 ENCODE chr16:29989109-29989116
64251 chr16 29989110 29989110 1 + G A LGG 29989109 + 29989089 29989129 41 CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC CCACCATGCCAGCTGGGGGCCAGGCCGGGAGCCTGAAGGAC < 41bp 1 0.422436627319919 1 0.551548600196838 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989109 chr16:29989110 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_25350 0 0 2 SF3B1 POSTAR2 ENCODE chr16:29989109-29989116
64251 chr19 13054427 13054427 1 + C T LGG 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAACGAGATGTGGGGCGTAAC < 41bp 1 0.615571945174222 1 0.637831568717957 experiment 0.768856109651556 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054427 nonsynonymous SNV 0.964 2 29 hm5C_associated_SNPs_25351 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 10794150 10794150 1 + G A LGG 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCACCCTTG < 41bp 1 0.381565438494161 1 0.130291700363159 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794150 nonsynonymous SNV 0.179 0 35 hm5C_associated_SNPs_25353 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr19 10794150 10794150 1 + G A LGG 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCCCTGACACCCCTCTCACCCTTGATGCCA < 41bp 1 0.190193993464495 1 0.0353526771068573 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794150 nonsynonymous SNV 0.179 0 29 hm5C_associated_SNPs_25354 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr16 4498835 4498835 1 + G T LGG 4498845 + 4498825 4498865 41 TCCACATCAAGATACGAGTTCCAAAGTAAGTGCCCCCTAGG TCCACATCAATATACGAGTTCCAAAGTAAGTGCCCCCTAGG < 41bp 1 0.370040030303863 1 0.105063170194626 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4498845 chr16:4498835 nonsynonymous SNV 0.998 4 11 hm5C_associated_SNPs_25356 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:4498807-4498840
64251 chr14 65209908 65209908 1 + C T LGG 65209911 + 65209891 65209931 41 ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTGCTCCAAGTA ACCTTCAGCTGGCCCGATGTCCGTGAGCTCTGCTCCAAGTA < 41bp 1 0.334357375319986 1 0.123286187648773 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209911 chr14:65209908 synonymous SNV . 0 18 hm5C_associated_SNPs_25357 0 0 1 DDX55 POSTAR2 ENCODE chr14:65209866-65209928
64251 chr19 13051399 13051399 1 + G A LGG 13051384 + 13051364 13051404 41 AAGCCCGAGCATATCCCTGACCCTGATGCTAAGAAGCCCGA AAGCCCGAGCATATCCCTGACCCTGATGCTAAGAAACCCGA < 41bp 1 0.136474618984234 1 0.0409500002861023 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051384 chr19:13051399 synonymous SNV . 0 36 hm5C_associated_SNPs_25358 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051391-13051420
64251 chr19 13051399 13051399 1 + G A LGG 13051392 + 13051372 13051412 41 GCATATCCCTGACCCTGATGCTAAGAAGCCCGAGGACTGGG GCATATCCCTGACCCTGATGCTAAGAAACCCGAGGACTGGG < 41bp 1 0.440686737423767 1 0.1988725066185 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051392 chr19:13051399 synonymous SNV . 0 28 hm5C_associated_SNPs_25359 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051391-13051420
64251 chr19 13051399 13051399 1 + G A LGG 13051402 + 13051382 13051422 41 GACCCTGATGCTAAGAAGCCCGAGGACTGGGATGAAGAGAT GACCCTGATGCTAAGAAACCCGAGGACTGGGATGAAGAGAT < 41bp 1 0.676221581708926 1 0.678125381469727 experiment 0.647556836582148 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13051402 chr19:13051399 synonymous SNV . 0 18 hm5C_associated_SNPs_25360 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051391-13051420
64251 chr4 154318427 154318427 1 + G A LGG 154318425 + 154318405 154318445 41 CACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA CACTTCGAGACCAAAGGGAACAACTAAAGGCAGAAGTAGAA < 41bp 1 0.183047273491074 1 0.167833685874939 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MND1 ENSG00000121211 CDS Human protein_coding chr4:154318425 chr4:154318427 synonymous SNV . 0 23 hm5C_associated_SNPs_25362 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:154318405-154318437
64251 chr22 47290699 47290699 1 + G A LGG 47290696 + 47290676 47290716 41 CCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGT CCAGATCCACATAGACATCCCTCACATGAGCCCTGAAGCGT < 41bp 1 0.131541224600773 1 0.067976325750351 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47290696 chr22:47290699 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_25363 0 0 4 GRWD1 POSTAR2 ENCODE chr22:47290686-47290742
64251 chr8 21856613 21856613 1 + C A LGG 21856607 + 21856587 21856627 41 GACATGTCTACTCAGGCAATCGCATCCTGACACTAGGAGAG GACATGTCTACTCAGGCAATCGCATCATGACACTAGGAGAG < 41bp 1 0.20944449237411 1 0.64108407497406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21856607 chr8:21856613 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_25365 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr8:21856605-21856619
64251 chr11 118944660 118944660 1 + C T LGG 118944659 + 118944639 118944679 41 GGGGCTGTCCAGCAATATATCCGGTCAGTCTGGAGGCACTT GGGGCTGTCCAGCAATATATCTGGTCAGTCTGGAGGCACTT < 41bp 1 0.63815161444759 1 0.21465677022934 experiment 0.72369677110482 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VPS11 ENSG00000160695 CDS Human protein_coding chr11:118944659 chr11:118944660 stopgain 0.983 0 22 hm5C_associated_SNPs_25366 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118944659-118944699
64251 chr7 128119311 128119311 1 + C A LGG 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATTCCATGAGCTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.121185460770829 1 0.170093446969986 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119311 nonsynonymous SNV 0.990 4 9 hm5C_associated_SNPs_25368 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr7 97833470 97833470 1 + C A LGG 97833471 + 97833451 97833491 41 CCAGCTTTTCCCTCACACACCTGACCGACTCGGACATCGAG CCAGCTTTTCCCTCACACAACTGACCGACTCGGACATCGAG < 41bp 1 0.157581618407846 1 0.0538173913955688 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833471 chr7:97833470 nonsynonymous SNV 0.389 5 20 hm5C_associated_SNPs_25369 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:97833441-97833472
64251 chr2 220149426 220149426 1 + C T LGG 220149415 + 220149395 220149435 41 CGCGAGCAGCAGCCGTCAGTCACTTCCAGGTCTGGGGGCAC CGCGAGCAGCAGCCGTCAGTCACTTCCAGGTTTGGGGGCAC < 41bp 1 0.51767921976397 1 0.657625555992126 experiment 0.964641560472059 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJB2 ENSG00000135924 CDS Human protein_coding chr2:220149415 chr2:220149426 nonsynonymous SNV 0.073 1 32 hm5C_associated_SNPs_25371 0 0 1 PPIG POSTAR2 ENCODE chr2:220149403-220149447
64251 chr9 71851948 71851948 1 + G T LGG 71851967 + 71851947 71851987 41 AGGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGA ATGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGA < 41bp 1 0.458436293353157 1 0.192907899618149 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851967 chr9:71851948 nonsynonymous SNV 0.896 4 2 hm5C_associated_SNPs_25372 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:71851944-71851975
64251 chr9 71851948 71851948 1 + G T LGG 71851968 + 71851948 71851988 41 GGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGAC TGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGAC < 41bp 1 0.746957965317839 1 0.668344497680664 experiment 0.506084069364323 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851968 chr9:71851948 nonsynonymous SNV 0.896 4 1 hm5C_associated_SNPs_25373 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:71851944-71851975
64251 chr2 220366664 220366664 1 + G A LGG 220366650 + 220366630 220366670 41 CCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCA CCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCATGCTCA < 41bp 1 0.463698978704555 1 0.366317808628082 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366650 chr2:220366664 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_25374 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:220366663-220366701
64251 chrX 70519876 70519876 1 + C T LGG 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTGGTGGAACTCCTCCTGCATTCAACTGTGCAGCT < 41bp 1 0.245503947400791 1 0.378761261701584 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519876 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_25376 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:70519729-70519929
64251 chr9 110086280 110086280 1 + G T LGG 110086266 + 110086246 110086286 41 TGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCT TGCTTCCAGCGTTACTACAGCAGATAGGTCGAGATAATCCT < 41bp 1 0.251459949839561 1 0.140137135982513 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110086266 chr9:110086280 nonsynonymous SNV 0.998 1 35 hm5C_associated_SNPs_25379 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:110086236-110086280
64251 chr1 200730022 200730022 1 + A G LGG 200730036 + 200730016 200730056 41 CCAGGAACACATCAAACCACCTGTTGTTAATTTGCTTCTAT CCAGGAGCACATCAAACCACCTGTTGTTAATTTGCTTCTAT < 41bp 1 0.175850005262905 1 0.0600105226039886 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200730036 chr1:200730022 synonymous SNV . 0 7 hm5C_associated_SNPs_25380 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:200729961-200730028
64251 chr20 62374307 62374307 1 + C T LGG 62374321 + 62374301 62374341 41 AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT AGCCTGTCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT < 41bp 1 0.141565841198711 1 0.10368749499321 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374321 chr20:62374307 synonymous SNV . 0 7 hm5C_associated_SNPs_25381 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62374268-62374320
64251 chr9 131846995 131846995 1 + T C LGG 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATCTGTCATCGTCGGTTTCGTGACCCT < 41bp 1 0.450990083183784 1 0.359122693538666 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131846995 nonsynonymous SNV 0.896 1 17 hm5C_associated_SNPs_25382 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131846965-131847000
64251 chr9 109689801 109689801 1 + G T LGG 109689820 + 109689800 109689840 41 CGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA CTGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA < 41bp 1 0.0277923797644762 1 0.116249918937683 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109689820 chr9:109689801 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_25383 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:109689796-109689820
64251 chr2 233681620 233681620 1 + C T LGG 233681615 + 233681595 233681635 41 AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGC AAGAGAGGCAGAAATGAGGGCAAAATGGGAAGAGGAAGAGC < 41bp 1 0.334593429080348 1 0.418675720691681 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681615 chr2:233681620 nonsynonymous SNV 0.991 4 26 hm5C_associated_SNPs_25384 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:233681600-233681620
64251 chr2 217012882 217012882 1 + C A LGG 217012900 + 217012880 217012920 41 TCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT TCATCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT < 41bp 1 0.602123688880971 1 0.365348935127258 experiment 0.795752622238058 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012900 chr2:217012882 nonsynonymous SNV 0.972 3 3 hm5C_associated_SNPs_25387 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:217012820-217012900
64251 chr13 113729378 113729378 1 + G A LGG 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCACTACACGGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.609431665983223 1 0.812180399894714 experiment 0.781136668033553 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729378 nonsynonymous SNV 0.570 4 13 hm5C_associated_SNPs_25388 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chrX 41025363 41025363 1 + C T LGG 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGTGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA < 41bp 1 0.160510492247055 1 0.0597126185894012 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025363 stopgain 0.999 1 8 hm5C_associated_SNPs_25389 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chr1 161130759 161130759 1 + G A LGG 161130757 + 161130737 161130777 41 CCATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAG CCATCTCGGACCAACTTAGCCCATTCCAAGTCTGTGAGCAG < 41bp 1 0.0533248510029909 1 0.0788349509239197 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130757 chr1:161130759 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_25390 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130748-161130772
64251 chr1 161130759 161130759 1 + G A LGG 161130758 + 161130738 161130778 41 CATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGT CATCTCGGACCAACTTAGCCCATTCCAAGTCTGTGAGCAGT < 41bp 1 0.0225630217615853 1 0.0785545706748962 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130758 chr1:161130759 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_25391 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130748-161130772
64251 chr1 161130759 161130759 1 + G A LGG 161130762 + 161130742 161130782 41 TCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGG TCGGACCAACTTAGCCCATTCCAAGTCTGTGAGCAGTGGGG < 41bp 1 0.165727278530488 1 0.250665366649628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130762 chr1:161130759 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_25392 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130748-161130772
64251 chr11 65402798 65402798 1 + G A LGG 65402789 + 65402769 65402809 41 CATCTCACATGAGGGTGACCCAGCATGGCGCAGCGCCATCC CATCTCACATGAGGGTGACCCAGCATGGCACAGCGCCATCC < 41bp 1 0.706350730505099 1 0.753655552864075 experiment 0.587298538989802 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402789 chr11:65402798 nonsynonymous SNV 0.961 4 30 hm5C_associated_SNPs_25393 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402798 65402798 1 + G A LGG 65402797 + 65402777 65402817 41 ATGAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAAC ATGAGGGTGACCCAGCATGGCACAGCGCCATCCTCAGCAAC < 41bp 1 0.242199288573668 1 0.135209679603577 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402797 chr11:65402798 nonsynonymous SNV 0.961 4 22 hm5C_associated_SNPs_25394 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402798 65402798 1 + G A LGG 65402799 + 65402779 65402819 41 GAGGGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACAC GAGGGTGACCCAGCATGGCACAGCGCCATCCTCAGCAACAC < 41bp 1 0.351972234752164 1 0.235641807317734 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402799 chr11:65402798 nonsynonymous SNV 0.961 4 20 hm5C_associated_SNPs_25395 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402798 65402798 1 + G A LGG 65402802 + 65402782 65402822 41 GGTGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCC GGTGACCCAGCATGGCACAGCGCCATCCTCAGCAACACGCC < 41bp 1 0.428844406825949 1 0.435181677341461 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402802 chr11:65402798 nonsynonymous SNV 0.961 4 17 hm5C_associated_SNPs_25396 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402798 65402798 1 + G A LGG 65402804 + 65402784 65402824 41 TGACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCT TGACCCAGCATGGCACAGCGCCATCCTCAGCAACACGCCCT < 41bp 1 0.0159656719850892 1 0.0316329598426819 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402804 chr11:65402798 nonsynonymous SNV 0.961 4 15 hm5C_associated_SNPs_25397 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr11 65402798 65402798 1 + G A LGG 65402805 + 65402785 65402825 41 GACCCAGCATGGCGCAGCGCCATCCTCAGCAACACGCCCTC GACCCAGCATGGCACAGCGCCATCCTCAGCAACACGCCCTC < 41bp 1 0.0422749890008556 1 0.0448653995990753 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402805 chr11:65402798 nonsynonymous SNV 0.961 4 14 hm5C_associated_SNPs_25398 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:65402791-65402813
64251 chr14 97002275 97002275 1 + G A LGG 97002283 + 97002263 97002303 41 ATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAA ATACCCACAACAAAACTCCACGTACAATGTGTCCGTTTCAA < 41bp 1 0.0737535199457158 1 0.0700874924659729 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97002283 chr14:97002275 synonymous SNV . 0 13 hm5C_associated_SNPs_25399 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:97002228-97002275
64251 chr8 145139388 145139388 1 + C T LGG 145139396 + 145139376 145139416 41 CTCATGGTTCTGCGGCAGGCCTCCGGCCGCCCCCACGGCTC CTCATGGTTCTGTGGCAGGCCTCCGGCCGCCCCCACGGCTC < 41bp 1 0.774767388787135 1 0.814286470413208 experiment 0.45046522242573 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139396 chr8:145139388 nonsynonymous SNV 0.985 2 13 hm5C_associated_SNPs_25400 0 0 2 DDX24 POSTAR2 ENCODE chr8:145139384-145139394
64251 chr19 39948334 39948334 1 + G T LGG 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATGAGTATGATGACGAGGACCAGTGGGAGGATGGAGCAGA < 41bp 1 0.221216916258514 1 0.183018505573273 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948334 nonsynonymous SNV 0.998 1 12 hm5C_associated_SNPs_25401 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948334 39948334 1 + G T LGG 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATGAGTATGATGACGAGGACCAGTGGGAGGATGGAGCAGAG < 41bp 1 0.495091471639613 1 0.234329462051392 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948334 nonsynonymous SNV 0.998 1 11 hm5C_associated_SNPs_25402 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr11 129996708 129996708 1 + C T LGG 129996707 + 129996687 129996727 41 GAGCAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGT GAGCAGCTGGAGATTCGGCACTGCAACCGAATGGACAGGGT < 41bp 1 0.718658879020721 1 0.539232492446899 experiment 0.562682241958559 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996707 chr11:129996708 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_25403 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr11 129996708 129996708 1 + C T LGG 129996710 + 129996690 129996730 41 CAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGTAAA CAGCTGGAGATTCGGCACTGCAACCGAATGGACAGGGTAAA < 41bp 1 0.155275412611587 1 0.0458104610443115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996710 chr11:129996708 nonsynonymous SNV 0.996 4 19 hm5C_associated_SNPs_25404 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr12 62688032 62688032 1 + G T LGG 62688042 + 62688022 62688062 41 ACAAATACCAGATGGGAGATCAAAATGTGTATCCTGGACCC ACAAATACCATATGGGAGATCAAAATGTGTATCCTGGACCC < 41bp 1 0.671414168493595 1 0.675409495830536 experiment 0.657171663012811 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control USP15 ENSG00000135655 CDS Human protein_coding chr12:62688042 chr12:62688032 nonsynonymous SNV 0.999 1 11 hm5C_associated_SNPs_25405 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:62688004-62688080
64251 chr22 35726441 35726441 1 + C T LGG 35726424 + 35726404 35726444 41 ATGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAAT ATGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGATAAT < 41bp 1 0.122158473143563 1 0.0412736833095551 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35726424 chr22:35726441 synonymous SNV . 0 38 hm5C_associated_SNPs_25408 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:35726418-35726450
64251 chr2 74683276 74683276 1 + A C LGG 74683272 + 74683252 74683292 41 CTCTCCACTTCGGGACCTATCAGGAGGGTTAGGGGGTCAGG CTCTCCACTTCGGGACCTATCAGGCGGGTTAGGGGGTCAGG < 41bp 1 0.704846429980733 1 0.856102228164673 experiment 0.590307140038534 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INO80B ENSG00000115274 CDS Human protein_coding chr2:74683272 chr2:74683276 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_25409 0 0 5 GRWD1 POSTAR2 ENCODE chr2:74683260-74683365
64251 chr19 50302934 50302934 1 + G A LGG 50302928 + 50302908 50302948 41 GGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGG GGCAGCGGGCGGCTGACCTCCTCTACACCATGTGTGACCGG < 41bp 1 0.643921989597348 1 0.848938941955566 experiment 0.712156020805303 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302928 chr19:50302934 nonsynonymous SNV 0.992 4 27 hm5C_associated_SNPs_25410 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:50302920-50302951
64251 chr1 20234222 20234222 1 + G A LGG 20234221 + 20234201 20234241 41 GTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACT GTCACCTTGGTGAAGACCTTCACCGCTCTCAACATCTGACT < 41bp 1 0.547337865735976 1 0.0341300666332245 experiment 0.905324268528049 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20234221 chr1:20234222 nonsynonymous SNV 0.992 2 22 hm5C_associated_SNPs_25411 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:20234213-20234225
64251 chr2 100013244 100013244 1 + C T LGG 100013261 + 100013241 100013281 41 CTGCAAGATAAAAATCCTCCCTCAGTACATTTTTAATTCTC CTGTAAGATAAAAATCCTCCCTCAGTACATTTTTAATTCTC < 41bp 1 0.52557651186367 1 0.0615257024765015 experiment 0.948846976272659 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100013261 chr2:100013244 synonymous SNV . 0 4 hm5C_associated_SNPs_25412 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:100013223-100013244
64251 chr1 117626696 117626696 1 + C T LGG 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCTA < 41bp 1 0.157583185412276 1 0.133395105600357 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626696 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_25413 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:117626667-117626698
64251 chr22 50857842 50857842 1 + G A LGG 50857854 + 50857834 50857874 41 GCTGCCTCGTCAGTGGGACTCAGGTGTTACTCACCTTGCTG GCTGCCTCATCAGTGGGACTCAGGTGTTACTCACCTTGCTG < 41bp 1 0.786776816394734 1 0.810294270515442 experiment 0.426446367210533 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50857854 chr22:50857842 nonsynonymous SNV 0.888 2 9 hm5C_associated_SNPs_25414 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350198 chr22:50857808-50857844
64251 chr16 31088179 31088179 1 + A G LGG 31088177 + 31088157 31088197 41 GAGAAGGCTTGGCAAGCCACCCAGGTCCTGAGGATGGTGCA GAGAAGGCTTGGCAAGCCACCCGGGTCCTGAGGATGGTGCA < 41bp 1 0.416761990175894 1 0.622970938682556 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31088177 chr16:31088179 synonymous SNV . 0 23 hm5C_associated_SNPs_25415 0 0 1 EIF3H POSTAR2 ENCODE chr16:31088173-31088206
64251 chr19 41120228 41120228 1 + C T LGG 41120209 + 41120189 41120229 41 CCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACG CCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGATG < 41bp 1 0.0278406573123015 1 0.0183580815792084 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41120209 chr19:41120228 synonymous SNV . 0 40 hm5C_associated_SNPs_25417 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41120194-41120229
64251 chr1 6681484 6681484 1 + G A LGG 6681488 + 6681468 6681508 41 CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTGCATG CAGATGACGATTCCTGAGACCTCGTGACCTGCTTCTGCATG < 41bp 1 0.448054958831787 1 0.0201326906681061 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681488 chr1:6681484 stopgain 1.000 1 17 hm5C_associated_SNPs_25418 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:6681472-6681500
64251 chr8 145726987 145726987 1 + C T LGG 145727002 + 145726982 145727022 41 TAGACCGGAGTGTCTCCTACCAGCTGAGCCCCCTGGACAGC TAGACTGGAGTGTCTCCTACCAGCTGAGCCCCCTGGACAGC < 41bp 1 0.583609504670433 1 0.549173891544342 experiment 0.832780990659133 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727002 chr8:145726987 nonsynonymous SNV 0.619 2 6 hm5C_associated_SNPs_25420 0 0 2 LARP4 POSTAR2 ENCODE chr8:145726953-145727077
64251 chr6 42975016 42975016 1 + C T LGG 42975034 + 42975014 42975054 41 CACCCTGGAAGCTGCTTGGCCACATCTCCAGGTACCAGGGC CATCCTGGAAGCTGCTTGGCCACATCTCCAGGTACCAGGGC < 41bp 1 0.40087347823186 1 0.242212921380997 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975034 chr6:42975016 nonsynonymous SNV 0.998 2 3 hm5C_associated_SNPs_25421 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:42974972-42975022
64251 chr18 56376782 56376782 1 + A G LGG 56376765 + 56376745 56376785 41 AAAATGAATTACCATTAACACATGAGACCAAAAAGCTATAC AAAATGAATTACCATTAACACATGAGACCAAAAAGCTGTAC < 41bp 1 0.684068038843411 1 0.356383293867111 experiment 0.631863922313178 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56376765 chr18:56376782 synonymous SNV . 0 38 hm5C_associated_SNPs_25423 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr18:56376782-56376803
64251 chr15 22940758 22940758 1 + T C LGG 22940756 + 22940736 22940776 41 GCACATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAG GCACATCCTCCGGCAGCAGCCCCCAGTACAACATCTGCGAG < 41bp 1 0.662577255577754 1 0.475522994995117 experiment 0.674845488844492 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22940756 chr15:22940758 synonymous SNV . 0 23 hm5C_associated_SNPs_25424 0 0 1 PPIG POSTAR2 ENCODE chr15:22940739-22940786
64251 chr9 116750643 116750643 1 + C T LGG 116750645 + 116750625 116750665 41 GAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGAGG GAGCACCAAGGTGGAGGGTCCAGAGCCAGTGCCAGCCGAGG < 41bp 1 0.376288161095778 1 0.737951040267944 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116750645 chr9:116750643 synonymous SNV . 0 19 hm5C_associated_SNPs_25425 0 0 1 BUD13 POSTAR2 ENCODE chr9:116750564-116750747
64251 chr15 41247771 41247771 1 + G A LGG 41247789 + 41247769 41247809 41 GCGCCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG GCACCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG < 41bp 1 0.791636938236921 1 0.871121823787689 experiment 0.416726123526159 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247789 chr15:41247771 synonymous SNV . 0 3 hm5C_associated_SNPs_25426 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:41247747-41247775
64251 chr13 20221318 20221318 1 + A G LIHC 20221300 + 20221280 20221320 41 AGAAAACTGTGCCTAAAAAGCAGAGGAATCAAGACAGAAGC AGAAAACTGTGCCTAAAAAGCAGAGGAATCAAGACAGAGGC < 41bp 1 0.772608101941818 1 0.827361941337585 experiment 0.454783796116364 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20221300 chr13:20221318 nonsynonymous SNV 0.000 0 39 hm5C_associated_SNPs_25429 0 0 2 UCHL5 POSTAR2 ENCODE chr13:20221299-20221434
64251 chr1 44684030 44684030 1 + C T LIHC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGGAGCAGGAGTACCAGCTTTATCTTCACGATGAT < 41bp 1 0.585835769957071 1 0.40985956788063 experiment 0.828328460085858 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684030 synonymous SNV . 0 32 hm5C_associated_SNPs_25430 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:44684024-44684054
64251 chr6 7393378 7393378 1 + T C LIHC 7393371 + 7393351 7393391 41 ACAGTCAAAGAGAAGGATGACATTCTGTTTGAAGACCTTCA ACAGTCAAAGAGAAGGATGACATTCTGCTTGAAGACCTTCA < 41bp 1 0.0809935570612929 1 0.0548428893089294 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7393371 chr6:7393378 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_25431 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:7393377-7393401
64251 chr11 65402545 65402545 1 + A G LIHC 65402544 + 65402524 65402564 41 TTGCCGACATGGACCTGCTTCACCGCGTTGTGGCGCCTGGG TTGCCGACATGGACCTGCTTCGCCGCGTTGTGGCGCCTGGG < 41bp 1 0.301124734494946 1 0.275615364313126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402544 chr11:65402545 nonsynonymous SNV 0.846 1 22 hm5C_associated_SNPs_25432 0 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402514-65402550
64251 chr6 33662786 33662786 1 - T C LIHC 33662799 - 33662779 33662819 41 AGCTTCATGGTGGAGTTGAGCTTGTCCTGGAGAATCCGAAT AGCTTCATGGTGGAGTTGAGCTTGTCCTGGAGAGTCCGAAT < 41bp 1 0.297605414094677 1 0.0317257046699524 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33662799 chr6:33662786 nonsynonymous SNV 0.980 0 34 hm5C_associated_SNPs_25435 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33662772-33662799
64251 chr9 131684577 131684577 1 + A G LIHC 131684567 + 131684547 131684587 41 TCTCCTCCCCACCAGGAGGCCGCGCTTAGAAGCCGCCCAGT TCTCCTCCCCACCAGGAGGCCGCGCTTAGAGGCCGCCCAGT < 41bp 1 0.620072620539156 1 0.854386687278748 experiment 0.759854758921687 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHYHD1 ENSG00000175287 UTR5 Human protein_coding chr9:131684567 chr9:131684577 . . 0 31 hm5C_associated_SNPs_25436 0 0 1 NCBP2 POSTAR2 ENCODE chr9:131684574-131684642
64251 chr9 131684577 131684577 1 + A G LIHC 131684580 + 131684560 131684600 41 AGGAGGCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT AGGAGGCCGCGCTTAGAGGCCGCCCAGTGCCCTGAGCGTCT < 41bp 1 0.475974833098287 1 0.148257344961166 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHYHD1 ENSG00000175287 UTR5 Human protein_coding chr9:131684580 chr9:131684577 . . 0 18 hm5C_associated_SNPs_25437 0 0 1 NCBP2 POSTAR2 ENCODE chr9:131684574-131684642
64251 chr11 43413470 43413470 1 + A G LIHC 43413476 + 43413456 43413496 41 GGAGTATAGATGACATAGGTCACCTCATTCATGAAGGCCTA GGAGTATAGATGACGTAGGTCACCTCATTCATGAAGGCCTA < 41bp 1 0.330816033847462 1 0.0967796444892883 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTC17 ENSG00000052841 CDS Human protein_coding chr11:43413476 chr11:43413470 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_25439 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:43413441-43413479
64251 chr17 20135097 20135097 1 + A G LIHC 20135081 + 20135061 20135101 41 TTATTTCTAGGTAGTGTGATCAAGCTGGAGGAACAGAAGTC TTATTTCTAGGTAGTGTGATCAAGCTGGAGGAACAGGAGTC < 41bp 1 0.311412313129149 1 0.462219029664993 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135081 chr17:20135097 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_25440 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr17 20135097 20135097 1 + A G LIHC 20135101 + 20135081 20135121 41 CAAGCTGGAGGAACAGAAGTCAGACCTGGAGAGGCAGCTGA CAAGCTGGAGGAACAGGAGTCAGACCTGGAGAGGCAGCTGA < 41bp 1 0.199150433376046 1 0.477300196886063 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135101 chr17:20135097 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_25441 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr1 44684035 44684035 1 + A G LIHC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGGTGAT < 41bp 1 0.5892834539998 1 0.446810990571976 experiment 0.8214330920004 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684035 nonsynonymous SNV 0.953 1 37 hm5C_associated_SNPs_25442 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:44684024-44684054
64251 chr1 162039999 162039999 1 + A G LIHC 162040009 + 162039989 162040029 41 AACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA AACCTTGTGGGCGATGGGCACGACCTGCGGATCCCCTTGCA < 41bp 1 0.348504996863193 1 0.467286974191666 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162040009 chr1:162039999 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_25443 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162039974-162040029
64251 chr1 183091289 183091289 1 + C A LIHC 183091283 + 183091263 183091303 41 GGAGATTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTG GGAGATTCAACTGCAGGCACCTCCTCAGATTGCCAACCCTG < 41bp 1 0.127182575059071 1 0.131907910108566 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091283 chr1:183091289 synonymous SNV . 0 27 hm5C_associated_SNPs_25444 0 0 2 SND1 POSTAR2 ENCODE chr1:183091269-183091308
64251 chr1 183091289 183091289 1 + C A LIHC 183091288 + 183091268 183091308 41 TTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTGTCCGT TTCAACTGCAGGCACCTCCTCAGATTGCCAACCCTGTCCGT < 41bp 1 0.431762214840578 1 0.547864556312561 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091288 chr1:183091289 synonymous SNV . 0 22 hm5C_associated_SNPs_25445 0 0 2 SND1 POSTAR2 ENCODE chr1:183091269-183091308
64251 chr14 23240666 23240666 1 + C G LIHC 23240646 + 23240626 23240666 41 TTCTCTTCTCCCCTCAGGTCCTTTACGACAGACCTTTACCC TTCTCTTCTCCCCTCAGGTCCTTTACGACAGACCTTTACCG < 41bp 1 0.112358587509796 1 0.0848830938339233 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240646 chr14:23240666 nonsynonymous SNV 0.967 4 41 hm5C_associated_SNPs_25446 0 0 17 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:23240652-23240684
64251 chr18 12718622 12718622 1 + T C LIHC 12718624 + 12718604 12718644 41 CATATCAGCGTAATGATCTGCAGCTTCGTAGGTATGTTTCT CATATCAGCGTAATGATCCGCAGCTTCGTAGGTATGTTTCT < 41bp 1 0.416994522583494 1 0.128462642431259 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718624 chr18:12718622 nonsynonymous SNV 0.810 0 19 hm5C_associated_SNPs_25450 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr18:12718598-12718623
64251 chr6 41754516 41754516 1 + C T LIHC 41754513 + 41754493 41754533 41 GGAACAGGGGAGACTGGACTCGACCGAACTGAAGGAAGGGA GGAACAGGGGAGACTGGACTCGATCGAACTGAAGGAAGGGA < 41bp 1 0.246959055571837 1 0.200345098972321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41754513 chr6:41754516 synonymous SNV . 0 24 hm5C_associated_SNPs_25451 0 0 3 DDX3X POSTAR2 ENCODE chr6:41754436-41754519
64251 chr8 28574491 28574491 1 + T C LIHC 28574488 + 28574468 28574508 41 GTGGCCCAGTCCACCTTCTACACTGTCCAGTACAGACCTGG GTGGCCCAGTCCACCTTCTACACCGTCCAGTACAGACCTGG < 41bp 1 0.401406696436494 1 0.222441822290421 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574488 chr8:28574491 synonymous SNV . 0 24 hm5C_associated_SNPs_25452 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574480-28574520
64251 chr16 560761 560761 1 + A G LIHC 560748 + 560728 560768 41 CCCGGCGTCAGAAGGAGCTCCTGTGCAAGATGGAGAGGGAG CCCGGCGTCAGAAGGAGCTCCTGTGCAAGATGGGGAGGGAG < 41bp 1 0.159472905460415 1 0.50566828250885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB11FIP3 ENSG00000090565 CDS Human protein_coding chr16:560748 chr16:560761 nonsynonymous SNV 0.997 3 34 hm5C_associated_SNPs_25453 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:560760-560780
64251 chr12 31244703 31244703 1 + C T LIHC 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCTGCGG < 41bp 1 0.521973156428399 1 0.369667828083038 experiment 0.956053687143202 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244703 synonymous SNV . 0 37 hm5C_associated_SNPs_25455 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr12 31244703 31244703 1 + C T LIHC 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATGCGGCCACTCGGCAGGCTGCGGGCAT < 41bp 1 0.238329363029276 1 0.0572096407413483 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244703 synonymous SNV . 0 33 hm5C_associated_SNPs_25456 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr20 2846064 2846064 1 + A G LIHC 2846046 + 2846026 2846066 41 AAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGACT AAGCCCAGCTTTCCTGCAGGCTCTGGTGGCTGAAGCTGGCT < 41bp 1 0.250115938812967 1 0.0568047761917114 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2846046 chr20:2846064 nonsynonymous SNV 0.998 0 39 hm5C_associated_SNPs_25457 0 0 1 LSM11 POSTAR2 ENCODE chr20:2846052-2846136
64251 chr1 155255677 155255677 1 + T C LIHC 155255657 + 155255637 155255677 41 TCTCGTGGTGCGTGAGGGCTCCGTGGGGAGGAAGATGTACT TCTCGTGGTGCGTGAGGGCTCCGTGGGGAGGAAGATGTACC < 41bp 1 0.391384849288485 1 0.348303824663162 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HCN3 ENSG00000143630 CDS Human protein_coding chr1:155255657 chr1:155255677 nonsynonymous SNV 1.000 5 41 hm5C_associated_SNPs_25458 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:155255673-155255694
64251 chr2 220412321 220412321 1 + A G LIHC 220412324 + 220412304 220412344 41 CCGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCGA CCGAGAGCGGGTGCTAGGGACACAGCTGAGTGCTGGGGCGA < 41bp 1 0.599138843075432 1 0.190271288156509 experiment 0.801722313849135 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220412324 chr2:220412321 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_25461 0 0 3 DDX3X POSTAR2 ENCODE chr2:220412296-220412352
64251 chr3 183899712 183899712 1 + C T LIHC 183899728 + 183899708 183899748 41 CAACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTA CAACTAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTA < 41bp 1 0.104410144174793 1 0.0590460896492004 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899728 chr3:183899712 synonymous SNV . 0 5 hm5C_associated_SNPs_25462 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899712 183899712 1 + C T LIHC 183899729 + 183899709 183899749 41 AACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAG AACTAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAG < 41bp 1 0.0314988284821927 1 0.0591250956058502 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899729 chr3:183899712 synonymous SNV . 0 4 hm5C_associated_SNPs_25463 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899712 183899712 1 + C T LIHC 183899730 + 183899710 183899750 41 ACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGT ACTAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGT < 41bp 1 0.312669546902954 1 0.0458435118198395 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899730 chr3:183899712 synonymous SNV . 0 3 hm5C_associated_SNPs_25464 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr6 168352589 168352589 1 + T C LIHC 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA TCCTCGGGGGACAGTCTGCCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.185459948766907 1 0.302536576986313 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352589 nonsynonymous SNV 0.284 4 19 hm5C_associated_SNPs_25465 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr6 168352589 168352589 1 + T C LIHC 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTCGGGGGACAGTCTGCCCCCCGACCCGTGGAAGCGGGAC < 41bp 1 0.439541709094786 1 0.618969440460205 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352589 nonsynonymous SNV 0.284 4 18 hm5C_associated_SNPs_25466 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr6 168352589 168352589 1 + T C LIHC 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTCGGGGGACAGTCTGCCCCCCGACCCGTGGAAGCGGGACG < 41bp 1 0.0609266240541775 1 0.402182877063751 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352589 nonsynonymous SNV 0.284 4 17 hm5C_associated_SNPs_25467 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr16 29828316 29828316 1 + A G LIHC 29828300 + 29828280 29828320 41 AGGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAA AGGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGGGGAA < 41bp 1 0.712780406431814 1 0.65258777141571 experiment 0.574439187136371 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828300 chr16:29828316 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_25468 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr16 29828316 29828316 1 + A G LIHC 29828301 + 29828281 29828321 41 GGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAG GGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGGGGAAG < 41bp 1 0.748990363355775 1 0.827671110630035 experiment 0.50201927328845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828301 chr16:29828316 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_25469 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr16 29828316 29828316 1 + A G LIHC 29828307 + 29828287 29828327 41 ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA ATCCGATGAGGAGCCGGAGGCCAAAGAAGGGGAAGAGGAAA < 41bp 1 0.413961757963961 1 0.692412078380585 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828307 chr16:29828316 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_25470 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr19 10794120 10794120 1 + C T LIHC 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCTTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG < 41bp 1 0.410535665238941 1 0.0538612008094788 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794120 synonymous SNV . 0 5 hm5C_associated_SNPs_25471 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr19 50733867 50733867 1 + A G LIHC 50733861 + 50733841 50733881 41 TTCTACCAGCTGCTGGGGGGCGCTGGAGAGCAGCTCAAAGG TTCTACCAGCTGCTGGGGGGCGCTGGGGAGCAGCTCAAAGG < 41bp 1 0.294320371360694 1 0.493166923522949 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50733861 chr19:50733867 synonymous SNV . 0 27 hm5C_associated_SNPs_25472 0 0 1 PRPF8 POSTAR2 ENCODE chr19:50733861-50733917
64251 chr12 104327795 104327795 1 + A G LIHC 104327808 + 104327788 104327828 41 AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATC AGAGAAGGGTTGGTTAAAAACCTTGGTACCATAGCCAAATC < 41bp 1 0.280375041485233 1 0.0689288377761841 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327808 chr12:104327795 nonsynonymous SNV 0.993 3 8 hm5C_associated_SNPs_25473 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:104327731-104327851
64251 chr14 73577721 73577721 1 + T C LIHC 73577703 + 73577683 73577723 41 CTGAAACCTACTCTGAGGCCCATCAGCTCTGCTCCATCTGT CTGAAACCTACTCTGAGGCCCATCAGCTCTGCTCCATCCGT < 41bp 1 0.376007579173383 1 0.136591106653214 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73577703 chr14:73577721 synonymous SNV . 0 39 hm5C_associated_SNPs_25474 0 0 34 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:73577672-73577739
64251 chr19 36580096 36580096 1 + G A LIHC 36580091 + 36580071 36580111 41 CTGCCGGCCCTGCCAGGGTTCGGATGGACTACACTTTGTCC CTGCCGGCCCTGCCAGGGTTCGGATAGACTACACTTTGTCC < 41bp 1 0.280655710206016 1 0.71817946434021 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36580091 chr19:36580096 nonsynonymous SNV 0.834 2 26 hm5C_associated_SNPs_25475 0 0 5 BUD13 POSTAR2 ENCODE chr19:36580070-36580105
64251 chr1 231401763 231401763 1 + T C LIHC 231401783 + 231401763 231401803 41 TTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTT CTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTT < 41bp 1 0.0710122361272369 1 0.0778032243251801 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401783 chr1:231401763 nonsynonymous SNV 0.999 5 1 hm5C_associated_SNPs_25476 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:231401760-231401780
64251 chr11 61507970 61507970 1 + T C LIHC 61507955 + 61507935 61507975 41 CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGG CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCACCTGGG < 41bp 1 0.128298694513691 1 0.423377007246017 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507955 chr11:61507970 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_25477 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr11 61507970 61507970 1 + T C LIHC 61507980 + 61507960 61508000 41 TACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT TACTTTGCCACCTGGGGCGACAACAAGGCCTTCAATGAGGT < 41bp 1 0.176096634775183 1 0.271728843450546 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507980 chr11:61507970 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_25478 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr11 66050524 66050524 1 + T C LIHC 66050523 + 66050503 66050543 41 CAGCTGGTGGTCCCAGAATACTCCATCCACGGCCTCTTCTG CAGCTGGTGGTCCCAGAATACCCCATCCACGGCCTCTTCTG < 41bp 1 0.529103487089583 1 0.119697898626328 experiment 0.941793025820834 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CNIH2 ENSG00000174871 CDS Human protein_coding chr11:66050523 chr11:66050524 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_25479 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:66050519-66050556
64251 chr12 53671310 53671310 1 + C T LIHC 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT GAGGAATTTGAAGTTAATGACCTGAACTATGAAGATAAACT < 41bp 1 0.0664077085571632 1 0.0537891685962677 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671310 synonymous SNV . 0 15 hm5C_associated_SNPs_25480 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53671280-53671320
64251 chr20 17956503 17956503 1 + A G LIHC 17956504 + 17956484 17956524 41 AAGTGCTGTTCAACATGAAACCTTAAACTATATAGGTCTGC AAGTGCTGTTCAACATGAAGCCTTAAACTATATAGGTCTGC < 41bp 1 0.0873387045711358 1 0.141920626163483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956504 chr20:17956503 nonsynonymous SNV 0.670 0 20 hm5C_associated_SNPs_25486 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:17956452-17956507
64251 chr8 17794745 17794745 1 + G A LIHC 17794729 + 17794709 17794749 41 GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGAAGTC < 41bp 1 0.301609957598414 1 0.36363285779953 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17794729 chr8:17794745 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_25487 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:17794733-17794750
64251 chr12 109637346 109637346 1 + G C LIHC 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCACGTTGAGGCTGGGAGCAGCTACCCTGAGATGGAGGT < 41bp 1 0.226173131323838 1 0.70685338973999 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637346 nonsynonymous SNV 0.876 4 28 hm5C_associated_SNPs_25488 0 0 2 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr12 109637347 109637347 1 + C T LIHC 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCACGTTGAGGCTGGGAGCAGCTACGTTGAGATGGAGGT < 41bp 1 0.227477320140465 1 0.43122798204422 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637347 nonsynonymous SNV 0.868 4 29 hm5C_associated_SNPs_25489 0 0 2 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr14 102478246 102478246 1 + A T LIHC 102478245 + 102478225 102478265 41 ATCAGATCACCCAGATCAATCATGGCCTGATGATGGTGGGG ATCAGATCACCCAGATCAATCTTGGCCTGATGATGGTGGGG < 41bp 1 0.179868243690652 1 0.175550997257233 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478245 chr14:102478246 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_25490 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102478212-102478253
64251 chr14 102478246 102478246 1 + A T LIHC 102478250 + 102478230 102478270 41 ATCACCCAGATCAATCATGGCCTGATGATGGTGGGGCCCTC ATCACCCAGATCAATCTTGGCCTGATGATGGTGGGGCCCTC < 41bp 1 0.115055402371681 1 0.0796366631984711 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478250 chr14:102478246 nonsynonymous SNV 0.989 4 17 hm5C_associated_SNPs_25491 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102478212-102478253
64251 chr14 102478246 102478246 1 + A T LIHC 102478266 + 102478246 102478286 41 ATGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGC TTGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGC < 41bp 1 0.00966681653528495 1 0.0681478083133698 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478266 chr14:102478246 nonsynonymous SNV 0.989 4 1 hm5C_associated_SNPs_25492 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102478212-102478253
64251 chr18 13056654 13056654 1 + C T LIHC 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTGTTGGTACAAATTGTGGAATTGAACCAT < 41bp 1 0.155086472082672 1 0.361524403095245 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056654 synonymous SNV . 0 25 hm5C_associated_SNPs_25493 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr1 110561690 110561690 1 + G C LIHC 110561676 + 110561656 110561696 41 CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTGC CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTCAGCTGC < 41bp 1 0.146174245757521 1 0.0428646504878998 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561676 chr1:110561690 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_25494 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:110561680-110561700
64251 chr5 159437629 159437629 1 + C G LIHC 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TACTCAGGAAGCCGAGTGTGCTGGCCCTGCAGTTCCTGATC < 41bp 1 0.761943781609425 1 0.10627356171608 experiment 0.476112436781151 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437629 nonsynonymous SNV 0.004 0 29 hm5C_associated_SNPs_25495 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:159437615-159437639
64251 chr3 112714019 112714019 1 + A G LIHC 112714008 + 112713988 112714028 41 ACAAAGAAAATGAATTTTTTCAAAGTTGGAAAACATTTTAC ACAAAGAAAATGAATTTTTTCAAAGTTGGAAGACATTTTAC < 41bp 1 0.597510830595113 1 0.735539615154266 experiment 0.804978338809775 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714008 chr3:112714019 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_25496 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:112714010-112714038
64251 chr10 51580576 51580576 1 + T C LIHC 51580558 + 51580538 51580578 41 CATGTATGTGTTTCCTAGGTCAAAGCTCAGATTCACAGTTG CATGTATGTGTTTCCTAGGTCAAAGCTCAGATTCACAGCTG < 41bp 1 0.393509744043188 1 0.444865673780441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NCOA4 ENSG00000138293 CDS Human other chr10:51580558 chr10:51580576 synonymous SNV . 0 39 hm5C_associated_SNPs_25497 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:51580568-51580595
64251 chr18 12718587 12718587 1 + T C LIHC 12718592 + 12718572 12718612 41 TGCCAGAGTCATTGTTCTTTCAAGCAGTCATTCATATCAGC TGCCAGAGTCATTGTCCTTTCAAGCAGTCATTCATATCAGC < 41bp 1 0.733913329284976 1 0.528835773468018 experiment 0.532173341430048 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718592 chr18:12718587 synonymous SNV . 0 16 hm5C_associated_SNPs_25498 0 0 1 RPS3 POSTAR2 ENCODE chr18:12718540-12718588
64251 chr1 16255127 16255127 1 + G C LIHC 16255107 + 16255087 16255127 41 CTATACAAAAAATGAAAAGACAGATAAAGAACGAACTTTTG CTATACAAAAAATGAAAAGACAGATAAAGAACGAACTTTTC < 41bp 1 0.182173760643208 1 0.427123665809631 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255107 chr1:16255127 nonsynonymous SNV 0.964 2 41 hm5C_associated_SNPs_25499 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr1 16255127 16255127 1 + G C LIHC 16255122 + 16255102 16255142 41 AAAGACAGATAAAGAACGAACTTTTGATCCGGAGAGAGTGG AAAGACAGATAAAGAACGAACTTTTCATCCGGAGAGAGTGG < 41bp 1 0.0154575246719979 1 0.0648849904537201 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255122 chr1:16255127 nonsynonymous SNV 0.964 2 26 hm5C_associated_SNPs_25500 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr1 16255127 16255127 1 + G C LIHC 16255130 + 16255110 16255150 41 ATAAAGAACGAACTTTTGATCCGGAGAGAGTGGAGAGAGAG ATAAAGAACGAACTTTTCATCCGGAGAGAGTGGAGAGAGAG < 41bp 1 0.463234965377431 1 0.512542724609375 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16255130 chr1:16255127 nonsynonymous SNV 0.964 2 18 hm5C_associated_SNPs_25501 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16255048-16255158
64251 chr12 49723711 49723711 1 + G A LIHC 49723698 + 49723678 49723718 41 TATAAGGTCACTGGAGGGTTCTGGGAAACCACCGGTGGCCA TATAAGGTCACTGGAGGGTTCTGGGAAACCACCAGTGGCCA < 41bp 1 0.791994725710329 1 0.763332545757294 experiment 0.416010548579342 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TROAP ENSG00000135451 CDS Human protein_coding chr12:49723698 chr12:49723711 synonymous SNV . 0 34 hm5C_associated_SNPs_25502 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:49723702-49723728
64251 chr17 36508877 36508877 1 + C T LIHC 36508864 + 36508844 36508884 41 AGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAG AGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGATATGGGAG < 41bp 1 0.453903005585478 1 0.43446296453476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508864 chr17:36508877 synonymous SNV . 0 34 hm5C_associated_SNPs_25504 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:36508860-36508880
64251 chr17 36508877 36508877 1 + C T LIHC 36508869 + 36508849 36508889 41 TGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAGGCTCT TGGCTGCTTCAGCTGCGAGCCTGACAGATATGGGAGGCTCT < 41bp 1 0.124432649270899 1 0.141251176595688 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508869 chr17:36508877 synonymous SNV . 0 29 hm5C_associated_SNPs_25505 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:36508860-36508880
64251 chr16 2122314 2122314 1 + T C LIHC 2122321 + 2122301 2122341 41 TAAAGTGCTCATCTTTACTTCCCCTTGCAGTGTGGACCAGC TAAAGTGCTCATCCTTACTTCCCCTTGCAGTGTGGACCAGC < 41bp 1 0.110965823793677 1 0.0362900495529175 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2122321 chr16:2122314 nonsynonymous SNV 0.919 2 14 hm5C_associated_SNPs_25507 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2122300-2122320
64251 chr17 7751676 7751676 1 + C T LIHC 7751660 + 7751640 7751680 41 GGAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATCCTAC GGAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATTCTAC < 41bp 1 0.109019703744358 1 0.211762398481369 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7751660 chr17:7751676 synonymous SNV . 0 37 hm5C_associated_SNPs_25508 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:7751652-7751678
64251 chr1 39906758 39906758 1 + A G LIHC 39906771 + 39906751 39906791 41 CCTGTGGAGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATT CCTGTGGGGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATT < 41bp 1 0.0909447978180288 1 0.179688930511475 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39906771 chr1:39906758 synonymous SNV . 0 8 hm5C_associated_SNPs_25510 0 0 21 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:39906740-39906760
64251 chr1 39906758 39906758 1 + A G LIHC 39906772 + 39906752 39906792 41 CTGTGGAGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATTG CTGTGGGGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATTG < 41bp 1 0.31123683237279 1 0.25485622882843 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39906772 chr1:39906758 synonymous SNV . 0 7 hm5C_associated_SNPs_25511 0 0 21 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:39906740-39906760
64251 chr12 110572803 110572803 1 + A G LIHC 110572783 + 110572763 110572803 41 CAATGGAAGAAGAAAAGGATCAGCTCATTAAGAGAGTTGAA CAATGGAAGAAGAAAAGGATCAGCTCATTAAGAGAGTTGAG < 41bp 1 0.326402245419139 1 0.185454398393631 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT81 ENSG00000122970 CDS Human protein_coding chr12:110572783 chr12:110572803 synonymous SNV . 0 41 hm5C_associated_SNPs_25512 0 0 2 BUD13 POSTAR2 ENCODE chr12:110572737-110572859
64251 chr1 110586378 110586378 1 + T C LIHC 110586381 + 110586361 110586401 41 GTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG GTCTGGAGGGGGAGACGCTTCCCCTGGAACGGGATGAAGTG < 41bp 1 0.559527634866204 1 0.131755471229553 experiment 0.880944730267591 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586381 chr1:110586378 nonsynonymous SNV 0.936 1 18 hm5C_associated_SNPs_25514 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110586324-110586382
64251 chr1 57161707 57161707 1 + G A LIHC 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTCCCATTTGATGATGAGCATGTACCTACATTATTTAAG < 41bp 1 0.165754189076031 1 0.0326279103755951 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161707 synonymous SNV . 0 32 hm5C_associated_SNPs_25515 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:57161683-57161721
64251 chr16 2818220 2818220 1 + A G LIHC 2818203 + 2818183 2818223 41 TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGGGGG < 41bp 1 0.0943534530357266 1 0.364237546920776 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818203 chr16:2818220 nonsynonymous SNV 0.992 3 38 hm5C_associated_SNPs_25516 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:2818100-2818220
64251 chr17 17697512 17697512 1 + T C LIHC 17697528 + 17697508 17697548 41 CCCCTTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCGGA CCCCCTCAGAAGGACAAGCTCCCTGAGAACCTGCTGTCGGA < 41bp 1 0.134390707037509 1 0.0345527231693268 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697528 chr17:17697512 nonsynonymous SNV 0.852 2 5 hm5C_associated_SNPs_25517 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:17697484-17697516
64251 chr1 114500821 114500821 1 + A G LIHC 114500816 + 114500796 114500836 41 GCACCAGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA GCACCAGTTCCTGGAGTTGCCCAGCGGGGTGTTTCCTTGCA < 41bp 1 0.402826960979946 1 0.692572891712189 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114500816 chr1:114500821 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_25518 0 0 2 IGF2BP1 POSTAR2 ENCODE chr1:114500737-114500822
64251 chr2 47205974 47205974 1 + C T LIHC 47205958 + 47205938 47205978 41 ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCTGCTT < 41bp 1 0.535527243426574 1 0.727853000164032 experiment 0.928945513146853 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47205958 chr2:47205974 nonsynonymous SNV 0.001 0 37 hm5C_associated_SNPs_25519 0 0 2 PPIG POSTAR2 ENCODE chr2:47205961-47206048
64251 chr11 44129594 44129594 1 + T C LIHC 44129604 + 44129584 44129624 41 ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCGTCTC ATCTATGCTCCGAAAAAGTACGTGGATGACTTTGGCGTCTC < 41bp 1 0.524672680628143 1 0.424795746803284 experiment 0.950654638743714 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129604 chr11:44129594 nonsynonymous SNV 0.994 3 11 hm5C_associated_SNPs_25520 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:44129570-44129597
64251 chr14 102467962 102467962 1 + A G LIHC 102467953 + 102467933 102467973 41 TGATCCGTGGCTGGGATGACCTCTTCAACAAGGTCAAAGAA TGATCCGTGGCTGGGATGACCTCTTCAACGAGGTCAAAGAA < 41bp 1 0.0595520588962542 1 0.142981112003326 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102467953 chr14:102467962 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_25521 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:102467934-102467964
64251 chr16 89977057 89977057 1 + A G LIHC 89977054 + 89977034 89977074 41 TCTTCTTCCGGTCACTGTTGCCAAACTATACCATGGAGGTA TCTTCTTCCGGTCACTGTTGCCAGACTATACCATGGAGGTA < 41bp 1 0.513072203492334 1 0.279062956571579 experiment 0.973855593015332 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89977054 chr16:89977057 nonsynonymous SNV 0.021 2 24 hm5C_associated_SNPs_25522 0 0 4 BUD13 POSTAR2 ENCODE chr16:89976979-89977059
64251 chr7 128119312 128119312 1 + T G LIHC 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATTCCCGGAGCTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.134992028320404 1 0.147854059934616 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119312 synonymous SNV . 0 10 hm5C_associated_SNPs_25524 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr2 233671287 233671287 1 + A G LIHC 233671297 + 233671277 233671317 41 GTGTGATGAAAGCTTCCAACCTCTTGGCGATATCATGAAAA GTGTGATGAAGGCTTCCAACCTCTTGGCGATATCATGAAAA < 41bp 1 0.245917372122099 1 0.300713717937469 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671297 chr2:233671287 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_25526 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:233671261-233671303
64251 chr3 58097543 58097543 1 + T C LIHC 58097553 + 58097533 58097573 41 CCTTTCAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAA CCTTTCAGAGCCAAAGTTGACCCTTCCCACGATGCCAGCAA < 41bp 1 0.0613800876763178 1 0.0631116032600403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097553 chr3:58097543 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_25527 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:58097543-58097544
64251 chr3 58097543 58097543 1 + T C LIHC 58097554 + 58097534 58097574 41 CTTTCAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAA CTTTCAGAGCCAAAGTTGACCCTTCCCACGATGCCAGCAAA < 41bp 1 0.00815672292134913 1 0.137729078531265 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097554 chr3:58097543 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_25528 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:58097543-58097544
64251 chr3 58097543 58097543 1 + T C LIHC 58097558 + 58097538 58097578 41 CAGAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGA CAGAGCCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGA < 41bp 1 0.0305168220961975 1 0.198926031589508 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097558 chr3:58097543 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_25529 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:58097543-58097544
64251 chr3 58097543 58097543 1 + T C LIHC 58097560 + 58097540 58097580 41 GAGTCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGAAG GAGCCAAAGTTGACCCTTCCCACGATGCCAGCAAAGTGAAG < 41bp 1 0.728962692863778 1 0.37614843249321 experiment 0.542074614272444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58097560 chr3:58097543 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_25530 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:58097543-58097544
64251 chr8 104438328 104438328 1 + A G LIHC 104438308 + 104438288 104438328 41 GTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCA GTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCG < 41bp 1 0.434387378137525 1 0.71207070350647 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438308 chr8:104438328 synonymous SNV . 0 41 hm5C_associated_SNPs_25531 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr8 104438328 104438328 1 + A G LIHC 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCGGGCTATGGAGACGAGGAAGAGCC < 41bp 1 0.416259466610858 1 0.340858519077301 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438328 synonymous SNV . 0 18 hm5C_associated_SNPs_25532 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr12 1517374 1517374 1 + C T LIHC 1517370 + 1517350 1517390 41 CGAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAA CGAGGATGACCACTTCAAATCCTCTCATTCCAATCAAACAA < 41bp 1 0.0371360967308439 1 0.0997641980648041 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERC1 ENSG00000082805 CDS Human protein_coding chr12:1517370 chr12:1517374 synonymous SNV . 0 25 hm5C_associated_SNPs_25533 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:1517339-1517386
64251 chr12 100995485 100995485 1 + A G LIHC 100995493 + 100995473 100995513 41 GTCAACTGATTGATGTTCTTCAAAACATGGTGAAAACATGC GTCAACTGATTGGTGTTCTTCAAAACATGGTGAAAACATGC < 41bp 1 0.472044892114235 1 0.318189650774002 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:100995493 chr12:100995485 nonsynonymous SNV 0.972 0 13 hm5C_associated_SNPs_25536 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:100995456-100995505
64251 chr14 64596894 64596894 1 + A G LIHC 64596874 + 64596854 64596894 41 TGTTGCAAGGCATGGTGGAACTGGTGAAGATTGGGAAGGAA TGTTGCAAGGCATGGTGGAACTGGTGAAGATTGGGAAGGAG < 41bp 1 0.2671431688523 1 0.240295857191086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64596874 chr14:64596894 synonymous SNV . 0 41 hm5C_associated_SNPs_25537 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64596867-64596905
64251 chr15 90771576 90771576 1 + C T LIHC 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TTGCTCTACTGGCACCGGAACAGCATGAAAGTCTTCCTGAA < 41bp 1 0.634993260906355 1 0.673759818077087 experiment 0.73001347818729 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771576 nonsynonymous SNV 0.996 3 10 hm5C_associated_SNPs_25538 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr17 30535215 30535215 1 + T C LIHC 30535224 + 30535204 30535244 41 AGTATTTCACCTACTGATTTCTGCAGGAAACACAAAATGCC AGTATTTCACCCACTGATTTCTGCAGGAAACACAAAATGCC < 41bp 1 0.775853361656385 1 0.789387464523315 experiment 0.44829327668723 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30535224 chr17:30535215 synonymous SNV . 0 12 hm5C_associated_SNPs_25539 0 0 3 FASTKD2 POSTAR2 ENCODE chr17:30535214-30535315
64251 chr6 144876004 144876004 1 + T C LIHC 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TCTATATTCTTCAGCAAGCCCGACGGGATCCACCCACCAAA < 41bp 1 0.231110542985648 1 0.320373117923737 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144876004 nonsynonymous SNV 0.945 1 34 hm5C_associated_SNPs_25541 0 0 2 GRWD1 POSTAR2 ENCODE chr6:144875978-144876011
64251 chr11 73638346 73638346 1 + A G LIHC 73638335 + 73638315 73638355 41 ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCTA ATTCTTGTGTTTTAGGTAGCCACATGGGAGAGGCAGATCTA < 41bp 1 0.634320567872387 1 0.857091784477234 experiment 0.731358864255226 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73638335 chr11:73638346 nonsynonymous SNV 0.999 2 32 hm5C_associated_SNPs_25543 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73638338-73638376
64251 chr11 124496923 124496923 1 + A G LIHC 124496905 + 124496885 124496925 41 AGTGCCCAGACCAGAAGTGTCTATATACCTGTCAGATCAAG AGTGCCCAGACCAGAAGTGTCTATATACCTGTCAGATCGAG < 41bp 1 0.611134023400643 1 0.265113681554794 experiment 0.777731953198714 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124496905 chr11:124496923 nonsynonymous SNV 0.974 1 39 hm5C_associated_SNPs_25544 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:124496897-124496934
64251 chr12 100995491 100995491 1 + T C LIHC 100995493 + 100995473 100995513 41 GTCAACTGATTGATGTTCTTCAAAACATGGTGAAAACATGC GTCAACTGATTGATGTTCCTCAAAACATGGTGAAAACATGC < 41bp 1 0.434711183635513 1 0.465515077114105 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:100995493 chr12:100995491 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_25545 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:100995456-100995505
64251 chr22 50277458 50277458 1 + A G LIHC 50277446 + 50277426 50277466 41 GAATGGACTTTAAAAGCGAGCAGGAGGACATGAAGCAGACA GAATGGACTTTAAAAGCGAGCAGGAGGACATGGAGCAGACA < 41bp 1 0.749707007414641 1 0.801378726959229 experiment 0.500585985170718 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50277446 chr22:50277458 nonsynonymous SNV 0.006 1 33 hm5C_associated_SNPs_25547 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:50277440-50277460
64251 chr3 52325053 52325053 1 + T C LIHC 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCCGCGGG < 41bp 1 0.621188020627033 1 0.759957551956177 experiment 0.757623958745933 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325053 nonsynonymous SNV 0.008 3 36 hm5C_associated_SNPs_25550 0 0 6 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr14 59970624 59970624 1 + A G LIHC 59970605 + 59970585 59970625 41 TTCTGGTCAGAAAGAAAAGACTTATTGTTCTCTTCAGCCAC TTCTGGTCAGAAAGAAAAGACTTATTGTTCTCTTCAGCCGC < 41bp 1 0.190683008038393 1 0.0456917881965637 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control JKAMP ENSG00000050130 CDS Human protein_coding chr14:59970605 chr14:59970624 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_25551 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:59970608-59970641
64251 chr19 48259062 48259062 1 + T C LIHC 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GAGCTCGGAGCTGACAGACCCGCTCAGGACCCTGAAGGTGC < 41bp 1 0.195357925761303 1 0.032894104719162 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259062 nonsynonymous SNV 0.335 4 20 hm5C_associated_SNPs_25552 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr2 192160940 192160940 1 + T G LIHC 192160923 + 192160903 192160943 41 AAAGTGGAAGAATACAGGAACAGAAATTTTTATGAACTGAG AAAGTGGAAGAATACAGGAACAGAAATTTTTATGAACGGAG < 41bp 1 0.359335326048238 1 0.558125734329224 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192160923 chr2:192160940 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_25553 0 0 2 GRWD1 POSTAR2 ENCODE chr2:192160928-192160953
64251 chr1 183086458 183086458 1 + A G LIHC 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGGGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG < 41bp 1 0.7584056444555 1 0.861978530883789 experiment 0.483188711089001 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086458 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_25554 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:183086440-183086460
64251 chr6 74493528 74493528 1 + T C LIHC 74493537 + 74493517 74493557 41 GGGTCTTGGACTAACAACTACTCCAGTGGAGGTATTGTATT GGGTCTTGGACCAACAACTACTCCAGTGGAGGTATTGTATT < 41bp 1 0.682518639187732 1 0.931756734848022 experiment 0.634962721624535 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CD109 ENSG00000156535 CDS Human protein_coding chr6:74493537 chr6:74493528 nonsynonymous SNV 0.880 3 12 hm5C_associated_SNPs_25555 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:74493502-74493531
64251 chr1 207510136 207510136 1 + A C LIHC 207510119 + 207510099 207510139 41 AACTACAGAAGTCTCACCAACTTCTCAGAAAACCACCACAA AACTACAGAAGTCTCACCAACTTCTCAGAAAACCACCCCAA < 41bp 1 0.334968578578205 1 0.807099044322968 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207510119 chr1:207510136 nonsynonymous SNV 0.001 3 38 hm5C_associated_SNPs_25556 0 0 3 RBPMS POSTAR2 SRX484628 chr1:207510120-207510140
64251 chr2 27277583 27277583 1 + T C LIHC 27277595 + 27277575 27277615 41 TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT TCACTTCCCGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT < 41bp 1 0.661231717718438 1 0.867565810680389 experiment 0.677536564563125 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27277595 chr2:27277583 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_25557 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27277576-27277601
64251 chr22 39078921 39078921 1 + T C LIHC 39078940 + 39078920 39078960 41 CTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGA CCTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGA < 41bp 1 0.287121082855482 1 0.0982420742511749 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078940 chr22:39078921 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_25558 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:39078895-39078923
64251 chr5 139909162 139909162 1 + A T LIHC 139909148 + 139909128 139909168 41 TTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACT TTTGCCACCTACATTTGGCCCAGCCACACTTTTCTATCACT < 41bp 1 0.0792507608942579 1 0.0913022756576538 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139909148 chr5:139909162 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_25559 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:139909125-139909172
64251 chrX 70674056 70674056 1 + T C LIHC 70674049 + 70674029 70674069 41 GTCAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGT GTCAGTATACTAAGACTGCCCAGGAGACTGTGAACGTCTGT < 41bp 1 0.603535036977632 1 0.803241491317749 experiment 0.792929926044736 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF1 ENSG00000147133 CDS Human protein_coding chrX:70674049 chrX:70674056 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_25560 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:70674034-70674077
64251 chr5 5462512 5462512 1 + G C LIHC 5462527 + 5462507 5462547 41 CTGTGGAGACACAGGGAGATCTGGTGGTGAGGCCCTGGCTG CTGTGCAGACACAGGGAGATCTGGTGGTGAGGCCCTGGCTG < 41bp 1 0.786034143291962 1 0.759236097335815 experiment 0.427931713416077 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5462527 chr5:5462512 nonsynonymous SNV 0.033 2 6 hm5C_associated_SNPs_25561 0 0 1 EIF3H POSTAR2 ENCODE chr5:5462511-5462550
64251 chr19 579633 579633 1 + G A LIHC 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG CGTGGTGCTGAAGGAGGACGCGCTACCCGGCCAGAAAACGG < 41bp 1 0.57711063878973 1 0.448272854089737 experiment 0.84577872242054 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579633 synonymous SNV . 0 25 hm5C_associated_SNPs_25562 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579633 579633 1 + G A LIHC 579636 + 579616 579656 41 CTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAA CTGAAGGAGGACGCGCTACCCGGCCAGAAAACGGAGTTCAA < 41bp 1 0.611111491477416 1 0.857751727104187 experiment 0.777777017045168 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579636 chr19:579633 synonymous SNV . 0 18 hm5C_associated_SNPs_25563 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579633 579633 1 + G A LIHC 579640 + 579620 579660 41 AGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAAGTGA AGGAGGACGCGCTACCCGGCCAGAAAACGGAGTTCAAGTGA < 41bp 1 0.738101769415293 1 0.452865809202194 experiment 0.523796461169414 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579640 chr19:579633 synonymous SNV . 0 14 hm5C_associated_SNPs_25564 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr11 13750208 13750208 1 + T C LIHC 13750192 + 13750172 13750212 41 CGTTATGGTTTTAATACTATCCTTGTGATCCTCATCTGGCG CGTTATGGTTTTAATACTATCCTTGTGATCCTCATCCGGCG < 41bp 1 0.132808746720881 1 0.0296982526779175 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAR1 ENSG00000197601 CDS Human protein_coding chr11:13750192 chr11:13750208 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_25565 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:13750184-13750210
64251 chr5 72201205 72201205 1 + A G LIHC 72201196 + 72201176 72201216 41 GTTTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTT GTTTCTCTGACCAGTTTCCTCTTCCCTTAGAAGAGCGTCTT < 41bp 1 0.202423791568909 1 0.314120441675186 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72201196 chr5:72201205 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_25568 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:72201201-72201224
64251 chr7 44096470 44096470 1 + C A LIHC 44096481 + 44096461 44096501 41 GAGAGTGGCCGCTTCCAGGACGTGGGACCCCAGGCCCCAGT GAGAGTGGCAGCTTCCAGGACGTGGGACCCCAGGCCCCAGT < 41bp 1 0.687636380217094 1 0.548544585704803 experiment 0.624727239565811 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44096481 chr7:44096470 nonsynonymous SNV 0.525 0 10 hm5C_associated_SNPs_25569 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:44096465-44096493
64251 chr10 75525661 75525661 1 + A T LIHC 75525655 + 75525635 75525675 41 GGCTCTTATGAATTCTTGGCCACTGTAGATTACTGCAAGGT GGCTCTTATGAATTCTTGGCCACTGTTGATTACTGCAAGGT < 41bp 1 0.264916997345929 1 0.0857260525226593 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75525655 chr10:75525661 synonymous SNV . 0 27 hm5C_associated_SNPs_25570 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75525634-75525669
64251 chr17 49239133 49239133 1 + A T LIHC 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTGTGGAGAGTGCAGAGAAGGTGATCGGCTTGT < 41bp 1 0.418884657261603 1 0.364423453807831 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239133 nonsynonymous SNV 0.996 3 30 hm5C_associated_SNPs_25572 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr19 2810300 2810300 1 + A T LIHC 2810285 + 2810265 2810305 41 GACCTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGG GACCTGGGCACTCTGAGGCTCTGCCCCATCCCTGCTGGCGG < 41bp 1 0.217307988718181 1 0.545696973800659 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control THOP1 ENSG00000172009 splicing Human protein_coding chr19:2810285 chr19:2810300 . 0.696 0 36 hm5C_associated_SNPs_25573 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:2810262-2810300
64251 chr19 2810300 2810300 1 + A T LIHC 2810288 + 2810268 2810308 41 CTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGGAGT CTGGGCACTCTGAGGCTCTGCCCCATCCCTGCTGGCGGAGT < 41bp 1 0.235190437176465 1 0.151009202003479 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THOP1 ENSG00000172009 splicing Human protein_coding chr19:2810288 chr19:2810300 . 0.696 0 33 hm5C_associated_SNPs_25574 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:2810262-2810300
64251 chr19 59057222 59057222 1 + A G LIHC 59057205 + 59057185 59057225 41 TCGGAGCCTCTGTGTGAGACCTGTGTAGAGGCGCACCAGCG TCGGAGCCTCTGTGTGAGACCTGTGTAGAGGCGCACCGGCG < 41bp 1 0.428647883858852 1 0.158044159412384 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057205 chr19:59057222 nonsynonymous SNV 0.995 3 38 hm5C_associated_SNPs_25575 0 0 23 FMR1 POSTAR2 GSE39682,GSM977616 chr19:59057128-59057229
64251 chr7 4825905 4825905 1 + A T LIHC 4825887 + 4825867 4825907 41 CCCTGGTCTTGCAGGGGAAGCGGCTGCAGTGGACTCGGAAG CCCTGGTCTTGCAGGGGAAGCGGCTGCAGTGGACTCGGTAG < 41bp 1 0.462219061179679 1 0.617867887020111 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4825887 chr7:4825905 nonsynonymous SNV 0.469 2 39 hm5C_associated_SNPs_25577 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:4825895-4825921
64251 chr2 27456323 27456323 1 + T G LIHC 27456304 + 27456284 27456324 41 CCGGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGGCTG CCGGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGGCGG < 41bp 1 0.65887989972688 1 0.368626415729523 experiment 0.68224020054624 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456304 chr2:27456323 synonymous SNV . 0 40 hm5C_associated_SNPs_25579 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:27456312-27456329
64251 chr19 13869871 13869871 1 + G A LIHC 13869855 + 13869835 13869875 41 CCCACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTGCGCT CCCACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTACGCT < 41bp 1 0.0561715159357457 1 0.0320457816123962 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869855 chr19:13869871 synonymous SNV . 0 37 hm5C_associated_SNPs_25580 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869856 + 13869836 13869876 41 CCACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTGCGCTG CCACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTACGCTG < 41bp 1 0.172922664993247 1 0.0549625158309937 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869856 chr19:13869871 synonymous SNV . 0 36 hm5C_associated_SNPs_25581 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869857 + 13869837 13869877 41 CACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTGCGCTGG CACTTACCTGCCTGGGGGCCCTGGCCCTGAGTCTACGCTGG < 41bp 1 0.413791981184961 1 0.104442358016968 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869857 chr19:13869871 synonymous SNV . 0 35 hm5C_associated_SNPs_25582 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869880 + 13869860 13869900 41 GCCCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCT GCCCTGAGTCTACGCTGGGGCCCCCAAAGCCCAGCCGAGCT < 41bp 1 0.0886810717884015 1 0.0582053959369659 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869880 chr19:13869871 synonymous SNV . 0 12 hm5C_associated_SNPs_25583 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869881 + 13869861 13869901 41 CCCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTC CCCTGAGTCTACGCTGGGGCCCCCAAAGCCCAGCCGAGCTC < 41bp 1 0.416308988200845 1 0.145917505025864 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869881 chr19:13869871 synonymous SNV . 0 11 hm5C_associated_SNPs_25584 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869882 + 13869862 13869902 41 CCTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCT CCTGAGTCTACGCTGGGGCCCCCAAAGCCCAGCCGAGCTCT < 41bp 1 0.262370417188807 1 0.25417548418045 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869882 chr19:13869871 synonymous SNV . 0 10 hm5C_associated_SNPs_25585 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869883 + 13869863 13869903 41 CTGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTG CTGAGTCTACGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTG < 41bp 1 0.246909866614505 1 0.375588208436966 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869883 chr19:13869871 synonymous SNV . 0 9 hm5C_associated_SNPs_25586 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr19 13869871 13869871 1 + G A LIHC 13869884 + 13869864 13869904 41 TGAGTCTGCGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTGA TGAGTCTACGCTGGGGCCCCCAAAGCCCAGCCGAGCTCTGA < 41bp 1 0.229954374866102 1 0.727136731147766 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869884 chr19:13869871 synonymous SNV . 0 8 hm5C_associated_SNPs_25587 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869822-13869930
64251 chr2 27455440 27455440 1 + A G LIHC 27455445 + 27455425 27455465 41 CTAACGTATTGGGGCACCACCCATGACCTCACCTTTCGAAC CTAACGTATTGGGGCGCCACCCATGACCTCACCTTTCGAAC < 41bp 1 0.0629445409970103 1 0.116858631372452 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455445 chr2:27455440 nonsynonymous SNV 0.785 2 16 hm5C_associated_SNPs_25588 0 0 4 FMR1 POSTAR2 ENCODE chr2:27455432-27455469
64251 chr17 29554603 29554603 1 + A C LIHC 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAC < 41bp 1 0.13234148994506 1 0.101155281066895 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554603 nonsynonymous SNV 0.999 3 41 hm5C_associated_SNPs_25589 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29554582-29554612
64251 chr19 11553327 11553327 1 + G A LIHC 11553314 + 11553294 11553334 41 AGAGAGGCCAAAGAGCAGCACCAGAAGCTGTGGGAAGGTAT AGAGAGGCCAAAGAGCAGCACCAGAAGCTGTGGAAAGGTAT < 41bp 1 0.30088728247933 1 0.148816645145416 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553314 chr19:11553327 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_25591 0 0 9 AARS POSTAR2 ENCODE chr19:11553320-11553331
64251 chr19 34895344 34895344 1 + C G LIHC 34895331 + 34895311 34895351 41 GTTTTCACCTGGTCGCCCGGCGGCCATGGCGGCCGTTCTGA GTTTTCACCTGGTCGCCCGGCGGCCATGGCGGCGGTTCTGA < 41bp 1 0.611100063568782 1 0.507500946521759 experiment 0.777799872862435 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34895331 chr19:34895344 synonymous SNV . 0 34 hm5C_associated_SNPs_25592 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34895340-34895380
64251 chr1 46033677 46033677 1 + A G LIHC 46033668 + 46033648 46033688 41 ACTCAGGCGGGGAGACAACCCCTTCCCCAAGAATGCTGATG ACTCAGGCGGGGAGACAACCCCTTCCCCAGGAATGCTGATG < 41bp 1 0.0457259201472768 1 0.284460932016373 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033668 chr1:46033677 nonsynonymous SNV 0.987 1 30 hm5C_associated_SNPs_25593 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:46033661-46033693
64251 chr2 153496548 153496548 1 + T A LIHC 153496565 + 153496545 153496585 41 CTCTGATGGAGCAGCAGGATCCAAAGGTAAGAAGTGCCGCA CTCAGATGGAGCAGCAGGATCCAAAGGTAAGAAGTGCCGCA < 41bp 1 0.375510759402877 1 0.443842768669128 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153496565 chr2:153496548 nonsynonymous SNV 0.998 0 4 hm5C_associated_SNPs_25594 0 0 4 BUD13 POSTAR2 ENCODE chr2:153496541-153496558
64251 chr2 232576616 232576616 1 + A G LIHC 232576618 + 232576598 232576638 41 AGAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTA AGAATGAGGAAAATGGGGGGCAGGAGGCTGACAATGAGGTA < 41bp 1 0.757973188681717 1 0.633066177368164 experiment 0.484053622636566 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576618 chr2:232576616 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_25595 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:232576576-232576629
64251 chr2 232576616 232576616 1 + A G LIHC 232576625 + 232576605 232576645 41 GGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAGACGAAG GGAAAATGGGGGGCAGGAGGCTGACAATGAGGTAGACGAAG < 41bp 1 0.390180423319205 1 0.186501353979111 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576625 chr2:232576616 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_25596 0 0 40 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:232576576-232576629
64251 chr7 90355912 90355912 1 + G T LIHC 90355900 + 90355880 90355920 41 GATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAA GATATGTGTCACAAAGATGTCTACACGGAACTTCCAGGGAA < 41bp 1 0.583280024069713 1 0.111333012580872 experiment 0.833439951860574 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355900 chr7:90355912 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_25598 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355912 90355912 1 + G T LIHC 90355903 + 90355883 90355923 41 ATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGG ATGTGTCACAAAGATGTCTACACGGAACTTCCAGGGAATGG < 41bp 1 0.357516538751933 1 0.0752006471157074 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355903 chr7:90355912 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_25599 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355912 90355912 1 + G T LIHC 90355905 + 90355885 90355925 41 GTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGAC GTGTCACAAAGATGTCTACACGGAACTTCCAGGGAATGGAC < 41bp 1 0.467541020276291 1 0.353830397129059 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355905 chr7:90355912 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_25600 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr12 57599015 57599015 1 + A G LIHC 57599013 + 57598993 57599033 41 GACTGCGGGGACGGCTCTGACGAGGAGGACTGCAGCATCGG GACTGCGGGGACGGCTCTGACGGGGAGGACTGCAGCATCGG < 41bp 1 0.620747715613747 1 0.957612454891205 experiment 0.758504568772506 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57599013 chr12:57599015 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_25608 0 0 1 NOL12 POSTAR2 ENCODE chr12:57599007-57599032
64251 chr14 103805201 103805201 1 + A G LIHC 103805206 + 103805186 103805226 41 AGAACAATTGAGGAGAGGGTCAATATCCTCTTTGATTTTGT AGAACAATTGAGGAGGGGGTCAATATCCTCTTTGATTTTGT < 41bp 1 0.244893254157619 1 0.354290693998337 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805206 chr14:103805201 nonsynonymous SNV 0.744 3 16 hm5C_associated_SNPs_25609 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805072-103805216
64251 chr14 103805201 103805201 1 + A G LIHC 103805213 + 103805193 103805233 41 TTGAGGAGAGGGTCAATATCCTCTTTGATTTTGTTAAGGTA TTGAGGAGGGGGTCAATATCCTCTTTGATTTTGTTAAGGTA < 41bp 1 0.308993100449506 1 0.492608666419983 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805213 chr14:103805201 nonsynonymous SNV 0.744 3 9 hm5C_associated_SNPs_25610 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805072-103805216
64251 chr5 132427026 132427026 1 + A G LIHC 132427041 + 132427021 132427061 41 AAATGAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG AAATGGGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG < 41bp 1 0.312521637723719 1 0.474324613809586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427041 chr5:132427026 nonsynonymous SNV 0.986 1 6 hm5C_associated_SNPs_25611 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427026 132427026 1 + A G LIHC 132427046 + 132427026 132427066 41 AGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGGAAGAG GGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGGAAGAG < 41bp 1 0.741853088510143 1 0.303033530712128 experiment 0.516293822979714 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427046 chr5:132427026 nonsynonymous SNV 0.986 1 1 hm5C_associated_SNPs_25612 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr12 104325389 104325389 1 + A G LIHC 104325380 + 104325360 104325400 41 AAGTAGAGAAGGATCAAGGACGGATGATGAAGTAGTACAGA AAGTAGAGAAGGATCAAGGACGGATGATGGAGTAGTACAGA < 41bp 1 0.448445646332087 1 0.453766793012619 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104325380 chr12:104325389 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_25613 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr12:104325304-104325401
64251 chr12 104325389 104325389 1 + A G LIHC 104325397 + 104325377 104325417 41 GGACGGATGATGAAGTAGTACAGAGGTTTGTGTTCATTTGA GGACGGATGATGGAGTAGTACAGAGGTTTGTGTTCATTTGA < 41bp 1 0.749710378922899 1 0.416449517011642 experiment 0.500579242154202 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104325397 chr12:104325389 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_25614 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr12:104325304-104325401
64251 chr19 11213382 11213382 1 + G T LIHC 11213368 + 11213348 11213388 41 ACCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTGTCAA ACCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCTTGTCAA < 41bp 1 0.645470318460755 1 0.651132822036743 experiment 0.709059363078489 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11213368 chr19:11213382 nonsynonymous SNV 0.997 3 35 hm5C_associated_SNPs_25615 0 0 7 BUD13 POSTAR2 ENCODE chr19:11213337-11213391
64251 chr19 49422315 49422315 1 + A G LIHC 49422304 + 49422284 49422324 41 CAGCTGGAGAAAGTGTACGACCCAAAGAATGAGGAGGACGA CAGCTGGAGAAAGTGTACGACCCAAAGAATGGGGAGGACGA < 41bp 1 0.240005753703801 1 0.192454725503922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49422304 chr19:49422315 nonsynonymous SNV 0.996 3 32 hm5C_associated_SNPs_25616 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49422296-49422323
64251 chr19 49422315 49422315 1 + A G LIHC 49422305 + 49422285 49422325 41 AGCTGGAGAAAGTGTACGACCCAAAGAATGAGGAGGACGAC AGCTGGAGAAAGTGTACGACCCAAAGAATGGGGAGGACGAC < 41bp 1 0.390381163985233 1 0.138236075639725 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49422305 chr19:49422315 nonsynonymous SNV 0.996 3 31 hm5C_associated_SNPs_25617 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49422296-49422323
64251 chr3 150264606 150264606 1 + C T LIHC 150264597 + 150264577 150264617 41 TTTCCGGGACAACATGGCGCCGTCCACGCCGCTCTTGACAG TTTCCGGGACAACATGGCGCCGTCCACGCTGCTCTTGACAG < 41bp 1 0.179319471266497 1 0.118523985147476 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150264597 chr3:150264606 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_25618 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150264589-150264613
64251 chr10 17277863 17277863 1 + A T LIHC 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGGATTTCTCTGCCTCTTCCTAACTTTTCCTCCCTG < 41bp 1 0.0807183416045682 1 0.564770221710205 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277863 synonymous SNV . 0 26 hm5C_associated_SNPs_25623 0 0 31 FUS POSTAR2 DRA001158,DRS012384 chr10:17277820-17277863
64251 chr13 26956988 26956988 1 + A G LIHC 26956984 + 26956964 26957004 41 TTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA TTTTAGTTATGGGTGAAGGTCCTGGGCGAGGAAGAGTAAAA < 41bp 1 0.136293517271895 1 0.227358371019363 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26956984 chr13:26956988 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_25624 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr13:26956960-26956994
64251 chr15 69747786 69747786 1 + A G LIHC 69747788 + 69747768 69747808 41 TGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGG TGAGGAGAAGAAAGTGGAGGCAAAGAAAGAAGAATCCGAGG < 41bp 1 0.406574066976159 1 0.592205762863159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747788 chr15:69747786 nonsynonymous SNV 0.999 0 19 hm5C_associated_SNPs_25625 0 0 65 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:69747760-69747800
64251 chr15 69747786 69747786 1 + A G LIHC 69747803 + 69747783 69747823 41 GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA GGAGGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA < 41bp 1 0.367114913511237 1 0.473363935947418 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747803 chr15:69747786 nonsynonymous SNV 0.999 0 4 hm5C_associated_SNPs_25626 0 0 65 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:69747760-69747800
64251 chr19 10794137 10794137 1 + T C LIHC 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCCCCGACACCCCTCTCGCCCTTG < 41bp 1 0.203426261450726 1 0.301589816808701 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794137 synonymous SNV . 0 22 hm5C_associated_SNPs_25628 0 0 36 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr19 10794137 10794137 1 + T C LIHC 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCCCCGACACCCCTCTCGCCCTTGATGCCA < 41bp 1 0.186230539734211 1 0.0253053903579712 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794137 synonymous SNV . 0 16 hm5C_associated_SNPs_25629 0 0 36 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr3 50005941 50005941 1 + A G LIHC 50005946 + 50005926 50005966 41 CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGT CTTTCAGAACAGCCAGAGTCCAGTTCAAGACCAAGATAAGT < 41bp 1 0.0881833317289301 1 0.236710667610168 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005946 chr3:50005941 synonymous SNV . 0 16 hm5C_associated_SNPs_25630 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50005759-50005956
64251 chr9 134322028 134322028 1 + T C LIHC 134322022 + 134322002 134322042 41 TACATACCATGACATGCTTCCTGCTTTTGTAAGTCTTCAGA TACATACCATGACATGCTTCCTGCTTCTGTAAGTCTTCAGA < 41bp 1 0.0945932987456448 1 0.124847084283829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134322022 chr9:134322028 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_25631 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr9:134322017-134322038
64251 chr6 107113765 107113765 1 + A G LIHC 107113763 + 107113743 107113783 41 CAGCAGCTTCTTACAGTAGCCAAATGGTTTGAAAAACAAGT CAGCAGCTTCTTACAGTAGCCAGATGGTTTGAAAAACAAGT < 41bp 1 0.255613883920622 1 0.799917101860046 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107113763 chr6:107113765 nonsynonymous SNV 0.934 0 23 hm5C_associated_SNPs_25633 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:107113733-107113771
64251 chr11 65827417 65827417 1 + C T LIHC 65827410 + 65827390 65827430 41 CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGCCAGACT CAAACGGGGCATTGAGAAGCCCCCCTTTGAGCTGCCAGACT < 41bp 1 0.165027436850722 1 0.0499608814716339 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827410 chr11:65827417 synonymous SNV . 0 28 hm5C_associated_SNPs_25634 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:65827400-65827420
64251 chr14 64990075 64990075 1 + A G LIHC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGGGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC < 41bp 1 0.661517049274128 1 0.591456055641174 experiment 0.676965901451744 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990075 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_25636 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64990042-64990078
64251 chr1 110134765 110134765 1 + T C LIHC 110134762 + 110134742 110134782 41 GAGATCTATACTCACTTCACCTGTGCCACAGACACGAAGAA GAGATCTATACTCACTTCACCTGCGCCACAGACACGAAGAA < 41bp 1 0.361630341888231 1 0.512643933296204 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110134762 chr1:110134765 synonymous SNV . 0 24 hm5C_associated_SNPs_25637 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110134694-110134787
64251 chr5 33445476 33445476 1 + A G LIHC 33445465 + 33445445 33445485 41 GAGAAGCAAAAGGAAGGAGGCAAAAAGAAGAACAAAGAAGG GAGAAGCAAAAGGAAGGAGGCAAAAAGAAGAGCAAAGAAGG < 41bp 1 0.485802211714121 1 0.517245292663574 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TARS ENSG00000113407 CDS Human protein_coding chr5:33445465 chr5:33445476 nonsynonymous SNV 0.997 0 32 hm5C_associated_SNPs_25638 0 0 30 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:33445420-33445480
64251 chr5 33445476 33445476 1 + A G LIHC 33445477 + 33445457 33445497 41 GAAGGAGGCAAAAAGAAGAACAAAGAAGGATCTGGAGATGG GAAGGAGGCAAAAAGAAGAGCAAAGAAGGATCTGGAGATGG < 41bp 1 0.420247619134152 1 0.240496218204498 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TARS ENSG00000113407 CDS Human protein_coding chr5:33445477 chr5:33445476 nonsynonymous SNV 0.997 0 20 hm5C_associated_SNPs_25639 0 0 30 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:33445420-33445480
64251 chr18 29116339 29116339 1 + T C LIHC 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGCCATTGACAAACCACCTGGCATGGCAGAAAAA < 41bp 1 0.12201825906349 1 0.139023840427399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116339 nonsynonymous SNV 0.664 1 10 hm5C_associated_SNPs_25649 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr18 29116339 29116339 1 + T C LIHC 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGCCATTGACAAACCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.425475266180102 1 0.167761027812958 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116339 nonsynonymous SNV 0.664 1 6 hm5C_associated_SNPs_25650 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr20 18462420 18462420 1 + C T LIHC 18462438 + 18462418 18462458 41 CACAGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTGA CATAGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTGA < 41bp 1 0.326603319430231 1 0.393308371305466 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462438 chr20:18462420 nonsynonymous SNV 0.687 2 3 hm5C_associated_SNPs_25651 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr20:18462388-18462420
64251 chr20 25397755 25397755 1 + A G LIHC 25397762 + 25397742 25397782 41 ATGAAGCAAAGTCAGGTGGACGAAGTGATTTGATACCAACT ATGAAGCAAAGTCGGGTGGACGAAGTGATTTGATACCAACT < 41bp 1 0.366800122324513 1 0.534420609474182 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GINS1 ENSG00000101003 CDS Human protein_coding chr20:25397762 chr20:25397755 synonymous SNV . 0 14 hm5C_associated_SNPs_25652 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:25397745-25397778
64251 chr22 22040824 22040824 1 + T C LIHC 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACCTCCACCGCGATGGCCCCGGAGACCACACATGAAGC < 41bp 1 0.245700617010919 1 0.479937523603439 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040824 nonsynonymous SNV 0.035 0 20 hm5C_associated_SNPs_25653 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr6 31929371 31929371 1 + T C LIHC 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCCCAGGAGCAGTGGGCCATCCCTGTGGAC < 41bp 1 0.277120197907508 1 0.373313963413239 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929371 nonsynonymous SNV . 0 14 hm5C_associated_SNPs_25654 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr7 55270298 55270298 1 + A G LIHC 55270305 + 55270285 55270325 41 GACAGCATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTG GACAGCATAGACGGCACCTTCCTCCCAGTGCCTGGTGAGTG < 41bp 1 0.0734109581391101 1 0.0574462711811066 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55270305 chr7:55270298 nonsynonymous SNV 0.931 1 14 hm5C_associated_SNPs_25655 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr7:55270262-55270300
64251 chr1 162470036 162470036 1 + A G LIHC 162470019 + 162469999 162470039 41 CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCGGGT < 41bp 1 0.404748944099756 1 0.123593032360077 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470019 chr1:162470036 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_25657 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469904-162470036
64251 chr2 32773060 32773060 1 + A G LIHC 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAGCAT < 41bp 1 0.17874527585826 1 0.526253879070282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773060 synonymous SNV . 0 38 hm5C_associated_SNPs_25658 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32773058-32773074
64251 chr2 55056511 55056511 1 + A G LIHC 55056514 + 55056494 55056534 41 ATGTATGCTTGTGAAGAAGGCTTTGCCACTGGTGGGCGAGA ATGTATGCTTGTGAAGAGGGCTTTGCCACTGGTGGGCGAGA < 41bp 1 0.0241561645372368 1 0.0604739487171173 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML6 ENSG00000214595 CDS Human protein_coding chr2:55056514 chr2:55056511 synonymous SNV . 0 18 hm5C_associated_SNPs_25659 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:55056488-55056520
64251 chr3 10076415 10076415 1 + A G LIHC 10076403 + 10076383 10076423 41 TAGAAGAATTTGTTAGTGGCCTGGAGTCTTACATTGAGGAT TAGAAGAATTTGTTAGTGGCCTGGAGTCTTACGTTGAGGAT < 41bp 1 0.689720474257349 1 0.42510998249054 experiment 0.620559051485302 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10076403 chr3:10076415 nonsynonymous SNV 0.998 0 33 hm5C_associated_SNPs_25660 1 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10076380-10076420
64251 chr5 65118671 65118671 1 + G T LIHC 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATTC < 41bp 1 0.410987106595632 1 0.163657635450363 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118671 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_25661 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr6 26093168 26093168 1 + A G LIHC 26093171 + 26093151 26093191 41 GCACCCAGGCCTGGATCAGCCCCTCATTGTGATCTGGGGTA GCACCCAGGCCTGGATCGGCCCCTCATTGTGATCTGGGGTA < 41bp 1 0.129963397577377 1 0.0348778069019318 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control HFE ENSG00000010704 CDS Human protein_coding chr6:26093171 chr6:26093168 nonsynonymous SNV 0.766 3 18 hm5C_associated_SNPs_25662 0 0 1 SND1 POSTAR2 ENCODE chr6:26093037-26093187
64251 chr8 17817570 17817570 1 + G T LIHC 17817579 + 17817559 17817599 41 GCATCAAATTTGGATGATTTCTACCCAGCAGAAGAAGACAC GCATCAAATTTTGATGATTTCTACCCAGCAGAAGAAGACAC < 41bp 1 0.309613906363773 1 0.0736866593360901 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17817579 chr8:17817570 nonsynonymous SNV 0.998 0 12 hm5C_associated_SNPs_25663 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17817547-17817572
64251 chr16 67575597 67575597 1 + T C LIHC 67575598 + 67575578 67575618 41 CCCTCAGCTGCTTCTTCTGTCAACAAGGCCTCCACAGTCAC CCCTCAGCTGCTTCTTCTGCCAACAAGGCCTCCACAGTCAC < 41bp 1 0.582581199464387 1 0.386766910552979 experiment 0.834837601071226 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575598 chr16:67575597 nonsynonymous SNV 0.979 3 20 hm5C_associated_SNPs_25669 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:67575588-67575614
64251 chr16 90027412 90027412 1 + C T LIHC 90027406 + 90027386 90027426 41 CCCTGTGTGAGCTCCAAAGTCAGCCACCAAGCTGAATACGA CCCTGTGTGAGCTCCAAAGTCAGCCATCAAGCTGAATACGA < 41bp 1 0.53724156348172 1 0.189499020576477 experiment 0.92551687303656 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90027406 chr16:90027412 synonymous SNV . 0 27 hm5C_associated_SNPs_25670 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:90027396-90027430
64251 chr20 3781980 3781980 1 + A G LIHC 3781963 + 3781943 3781983 41 CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCAGGGGG < 41bp 1 0.187987167211782 1 0.691020667552948 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781963 chr20:3781980 nonsynonymous SNV 0.001 0 38 hm5C_associated_SNPs_25671 0 0 2 GRWD1 POSTAR2 ENCODE chr20:3781902-3781988
64251 chr5 98115463 98115463 1 + C G LIHC 98115483 + 98115463 98115503 41 CATTCTGCCGTGTTGGGTATCAGTGACCTCATGAGCCAGAG GATTCTGCCGTGTTGGGTATCAGTGACCTCATGAGCCAGAG < 41bp 1 0.61801553283273 1 0.792576491832733 experiment 0.763968934334539 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RGMB ENSG00000174136 CDS Human protein_coding chr5:98115483 chr5:98115463 nonsynonymous SNV 0.998 5 1 hm5C_associated_SNPs_25673 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:98115436-98115483
64251 chr6 38029448 38029448 1 + C T LIHC 38029468 + 38029448 38029488 41 CACCAGTGACAACAACAATACCTCGATAACCACGCCAACTC TACCAGTGACAACAACAATACCTCGATAACCACGCCAACTC < 41bp 1 0.142235336033046 1 0.289323002099991 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38029468 chr6:38029448 synonymous SNV . 0 1 hm5C_associated_SNPs_25674 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:38029418-38029462
64251 chr6 72003250 72003250 1 + C G LIHC 72003257 + 72003237 72003277 41 ACTTCAAAGATATCCGATATCAAAATGACTTGAGCAATCTT ACTTCAAAGATATGCGATATCAAAATGACTTGAGCAATCTT < 41bp 1 0.679069318450896 1 0.313617646694183 experiment 0.641861363098207 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003257 chr6:72003250 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_25675 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:72003235-72003272
64251 chr14 71570336 71570336 1 + T C LIHC 71570324 + 71570304 71570344 41 AGCCACGAACAGCTTAAAGACATTCTTGGGGGTCCTATCAG AGCCACGAACAGCTTAAAGACATTCTTGGGGGCCCTATCAG < 41bp 1 0.0573424923083356 1 0.184081703424454 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71570324 chr14:71570336 synonymous SNV . 0 33 hm5C_associated_SNPs_25676 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr14:71570315-71570344
64251 chr16 21636384 21636384 1 + A G LIHC 21636393 + 21636373 21636413 41 GAGCCAACTAGAGGCAGGGTCATCCTTGCCCTTGTCCTCCC GAGCCAACTAGGGGCAGGGTCATCCTTGCCCTTGTCCTCCC < 41bp 1 0.424764811942876 1 0.126813024282455 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL9 ENSG00000197006 CDS Human protein_coding chr16:21636393 chr16:21636384 synonymous SNV . 0 12 hm5C_associated_SNPs_25677 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:21636355-21636427
64251 chr20 5932775 5932775 1 + T C LIHC 5932767 + 5932747 5932787 41 GAAAATGGAGAGAAAGAGAACACAGACCTGATCTGAGTAAA GAAAATGGAGAGAAAGAGAACACAGACCCGATCTGAGTAAA < 41bp 1 0.471408572098565 1 0.592701375484467 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MCM8 ENSG00000125885 CDS Human protein_coding chr20:5932767 chr20:5932775 synonymous SNV . 0 29 hm5C_associated_SNPs_25678 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:5932760-5932785
64251 chr6 31602092 31602092 1 + A G LIHC 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGG < 41bp 1 0.176213707054964 1 0.053958922624588 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602092 nonsynonymous SNV 0.998 1 41 hm5C_associated_SNPs_25679 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602092 31602092 1 + A G LIHC 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGGT < 41bp 1 0.303379174483905 1 0.0938403904438019 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602092 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_25680 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602092 31602092 1 + A G LIHC 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGGTA < 41bp 1 0.382271196382369 1 0.196896582841873 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602092 nonsynonymous SNV 0.998 1 39 hm5C_associated_SNPs_25681 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602092 31602092 1 + A G LIHC 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGGTACA < 41bp 1 0.45947714736414 1 0.814906477928162 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602092 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_25682 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602092 31602092 1 + A G LIHC 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGGTACAGGCA < 41bp 1 0.434314640073583 1 0.84959888458252 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602092 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_25683 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr15 79185884 79185884 1 + T C LIHC 79185883 + 79185863 79185903 41 ATATTTTTGTCTTCATAGCTCTTTTATCTTCCTGCCAAGAA ATATTTTTGTCTTCATAGCTCCTTTATCTTCCTGCCAAGAA < 41bp 1 0.0169744174343105 1 0.0831121206283569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79185883 chr15:79185884 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_25684 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79185863-79185887
64251 chr22 42042966 42042966 1 + T A LIHC 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCACTCAAGCCTCCTCCAATAAAGCTCTATCGG < 41bp 1 0.0958681951273633 1 0.207510054111481 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042966 synonymous SNV . 0 11 hm5C_associated_SNPs_25685 0 0 4 WDR33 POSTAR2 GSE61123,GSM1496985 chr22:42042960-42042980
64251 chr3 127323790 127323790 1 + A G LIHC 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GGGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT < 41bp 1 0.693100456250976 1 0.554031848907471 experiment 0.613799087498047 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323790 nonsynonymous SNV 0.939 2 2 hm5C_associated_SNPs_25686 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127323776-127323800
64251 chr11 75508294 75508294 1 + T G LIHC 75508290 + 75508270 75508310 41 CATCATCGTGGTCGGGGGTGCGGCTGAGTCTCTGAGCTCCA CATCATCGTGGTCGGGGGTGCGGCGGAGTCTCTGAGCTCCA < 41bp 1 0.701999457903666 1 0.524019956588745 experiment 0.596001084192667 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75508290 chr11:75508294 synonymous SNV . 0 25 hm5C_associated_SNPs_25687 0 0 1 RPS3 POSTAR2 ENCODE chr11:75508259-75508328
64251 chr11 118277757 118277757 1 + T C LIHC 118277750 + 118277730 118277770 41 CTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTC CTGAGATCCCTAGAGCTATTCAGAGCCCGAAAAAAATAGTC < 41bp 1 0.713705695141029 1 0.891548871994019 experiment 0.572588609717942 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277750 chr11:118277757 nonsynonymous SNV 0.998 1 28 hm5C_associated_SNPs_25688 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:118277696-118277760
64251 chr8 23104294 23104294 1 + A G LIHC 23104304 + 23104284 23104324 41 GAGGACGAGGAGCGCATGTCCTTCCTGTTCTCCGCTTTCAA GAGGACGAGGGGCGCATGTCCTTCCTGTTCTCCGCTTTCAA < 41bp 1 0.182721769649868 1 0.0657308399677277 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23104304 chr8:23104294 nonsynonymous SNV 0.997 4 11 hm5C_associated_SNPs_25690 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:23104289-23104322
64251 chrX 107807134 107807134 1 + C A LIHC 107807137 + 107807117 107807157 41 TGATGGAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG TGATGGAATTCCAGGGCAACCAGGACCAAAAGGAATCAGAG < 41bp 1 0.625163742747729 1 0.797241449356079 experiment 0.749672514504542 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107807137 chrX:107807134 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_25691 0 0 3 BUD13 POSTAR2 ENCODE chrX:107807116-107807157
64251 chr4 119631228 119631228 1 + C A LIHC 119631220 + 119631200 119631240 41 GAAACATATGCATCCTATTTCAGTGCTCCTAATTCCTACTT GAAACATATGCATCCTATTTCAGTGCTCATAATTCCTACTT < 41bp 1 0.542298589512218 1 0.268441736698151 experiment 0.915402820975564 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control METTL14 ENSG00000145388 CDS Human protein_coding chr4:119631220 chr4:119631228 nonsynonymous SNV 0.920 3 29 hm5C_associated_SNPs_25692 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:119631222-119631245
64251 chr10 6265921 6265921 1 + A G LIHC 6265930 + 6265910 6265950 41 TTCAATTTCAGAGGAGATGCCCTACCTGAAATGCCCTCTTC TTCAATTTCAGGGGAGATGCCCTACCTGAAATGCCCTCTTC < 41bp 1 0.0517619766228927 1 0.123281687498093 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6265930 chr10:6265921 nonsynonymous SNV 0.996 2 12 hm5C_associated_SNPs_25693 0 0 1 BUD13 POSTAR2 ENCODE chr10:6265895-6265949
64251 chr11 65351997 65351997 1 + A G LIHC 65352003 + 65351983 65352023 41 ACATCAAGCAGAACAACAAGCAGGTGAGATGGGGTGGGGGA ACATCAAGCAGAACGACAAGCAGGTGAGATGGGGTGGGGGA < 41bp 1 0.571467909253659 1 0.938925623893738 experiment 0.857064181492681 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65352003 chr11:65351997 nonsynonymous SNV 1.000 5 15 hm5C_associated_SNPs_25694 0 0 1 DDX24 POSTAR2 ENCODE chr11:65351972-65352006
64251 chr15 90771568 90771568 1 + T C LIHC 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TCGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA < 41bp 1 0.650884123544597 1 0.566934525966644 experiment 0.698231752910806 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771568 nonsynonymous SNV 0.933 2 2 hm5C_associated_SNPs_25695 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr19 11141502 11141502 1 + G A LIHC 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGAGCTCGGCCTGAACCTCCAGTCGGC < 41bp 1 0.514896454871662 1 0.773830533027649 experiment 0.970207090256675 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141502 nonsynonymous SNV 0.987 4 17 hm5C_associated_SNPs_25696 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chr20 43545448 43545448 1 + A G LIHC 43545459 + 43545439 43545479 41 CATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC CATTTTGAGGCCCATGAGGCCGCACAGCAGGCCATCAACAC < 41bp 1 0.285151010392997 1 0.0426983833312988 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545459 chr20:43545448 nonsynonymous SNV 0.684 4 10 hm5C_associated_SNPs_25697 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:43545440-43545460
64251 chr2 62934345 62934345 1 + A G LIHC 62934334 + 62934314 62934354 41 TTGACTGATCATCATGGCTTCAGTTTGGAAGAGACTGCAGC TTGACTGATCATCATGGCTTCAGTTTGGAAGGGACTGCAGC < 41bp 1 0.109475924049422 1 0.0521164834499359 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1 ENSG00000115504 CDS Human protein_coding chr2:62934334 chr2:62934345 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_25698 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:62934273-62934347
64251 chr5 71492183 71492183 1 + G A LIHC 71492181 + 71492161 71492201 41 GGCCAGTGGGGATGACCGAGCCGAAGAAGACATGGATGAGG GGCCAGTGGGGATGACCGAGCCAAAGAAGACATGGATGAGG < 41bp 1 0.322176580244157 1 0.443088471889496 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492181 chr5:71492183 nonsynonymous SNV 0.839 4 23 hm5C_associated_SNPs_25699 0 0 22 FMR1 POSTAR2 GSE39682,GSM977616 chr5:71492146-71492183
64251 chr1 32680499 32680499 1 - A G LIHC 32680487 - 32680467 32680507 41 TTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAA TTGCTTCTCGGCTGAATGGTCTGCTGGGGTCTGGCATAGAA < 41bp 1 0.525264822502074 1 0.272576093673706 experiment 0.949470354995853 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32680487 chr1:32680499 synonymous SNV . 0 9 hm5C_associated_SNPs_25703 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32680460-32680499
64251 chr17 4856369 4856369 1 + A G LIHC 4856386 + 4856366 4856406 41 AACATCAACAATACTCTGGGCCCTGCTCTGCTGCAAAAGGC AACGTCAACAATACTCTGGGCCCTGCTCTGCTGCAAAAGGC < 41bp 1 0.0729047808846899 1 0.0587864220142365 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856386 chr17:4856369 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_25705 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:4856340-4856380
64251 chr19 11134207 11134207 1 + A G LIHC 11134199 + 11134179 11134219 41 CTTGGGGGCTTCCAGGTGGACCTGAATGAGGAGGAAACCAT CTTGGGGGCTTCCAGGTGGACCTGAATGGGGAGGAAACCAT < 41bp 1 0.296953875449185 1 0.0979980528354645 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11134199 chr19:11134207 nonsynonymous SNV 0.998 3 29 hm5C_associated_SNPs_25706 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:11134191-11134216
64251 chr1 27269167 27269167 1 + A G LIHC 27269155 + 27269135 27269175 41 CCCTGATTGTAAGCAGGATACTGAGGAAGATGAGGAGGAAG CCCTGATTGTAAGCAGGATACTGAGGAAGATGGGGAGGAAG < 41bp 1 0.587806736846 1 0.202516466379166 experiment 0.824386526308001 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUDC ENSG00000090273 CDS Human protein_coding chr1:27269155 chr1:27269167 nonsynonymous SNV 0.858 1 33 hm5C_associated_SNPs_25707 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:27269144-27269186
64251 chr19 12902864 12902864 1 + C T LIHC 12902850 + 12902830 12902870 41 TCGCCTCTTCGGAGCTGGAACGCCTGATTGTCCCCAACAGC TCGCCTCTTCGGAGCTGGAACGCCTGATTGTCCCTAACAGC < 41bp 1 0.411920884393949 1 0.150790572166443 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12902850 chr19:12902864 synonymous SNV . 0 35 hm5C_associated_SNPs_25708 0 0 1 RBM15 POSTAR2 ENCODE chr19:12902841-12902889
64251 chr1 110586373 110586373 1 + A G LIHC 110586381 + 110586361 110586401 41 GTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG GTCTGGAGGGGGGGACGTTTCCCCTGGAACGGGATGAAGTG < 41bp 1 0.733134646229521 1 0.222851425409317 experiment 0.533730707540957 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586381 chr1:110586373 nonsynonymous SNV 0.996 1 13 hm5C_associated_SNPs_25712 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110586324-110586382
64251 chr1 151259167 151259167 1 + C A LIHC 151259156 + 151259136 151259176 41 GCAGAATGGTTTTGGGAGCCCTGAACCTTCCCTCCCAGGAA GCAGAATGGTTTTGGGAGCCCTGAACCTTCCATCCCAGGAA < 41bp 1 0.770715572202633 1 0.544977188110352 experiment 0.458568855594735 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151259156 chr1:151259167 nonsynonymous SNV 0.020 1 32 hm5C_associated_SNPs_25713 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:151259144-151259171
64251 chr3 179478906 179478906 1 + A G LIHC 179478903 + 179478883 179478923 41 CCTGTTGTGCTCTGTAGCATCAGACATCGATGAGTCATCAG CCTGTTGTGCTCTGTAGCATCAGGCATCGATGAGTCATCAG < 41bp 1 0.568503819526211 1 0.74445629119873 experiment 0.862992360947579 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179478903 chr3:179478906 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_25714 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr3:179478898-179478919
64251 chr11 94599276 94599276 1 + A G LIHC 94599284 + 94599264 94599304 41 CAGACCTCTCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAA CAGACCTCTCTTGCCAGCAGCCAGCTGGCTGAGGAAAAGAA < 41bp 1 0.0385683011105878 1 0.161795824766159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94599284 chr11:94599276 nonsynonymous SNV 0.994 2 13 hm5C_associated_SNPs_25716 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:94599240-94599280
64251 chr11 94599276 94599276 1 + A G LIHC 94599292 + 94599272 94599312 41 TCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAAGGAAGAGA TCTTGCCAGCAGCCAGCTGGCTGAGGAAAAGAAGGAAGAGA < 41bp 1 0.548608805339603 1 0.474799007177353 experiment 0.902782389320794 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94599292 chr11:94599276 nonsynonymous SNV 0.994 2 5 hm5C_associated_SNPs_25717 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:94599240-94599280
64251 chr12 57604994 57604994 1 + T C LIHC 57604984 + 57604964 57605004 41 TGCTCTGGCTACTGTGAGAACTTTGGCACATGCCAGATGGC TGCTCTGGCTACTGTGAGAACTTTGGCACACGCCAGATGGC < 41bp 1 0.0673438463026827 1 0.208362340927124 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604984 chr12:57604994 nonsynonymous SNV 0.831 2 31 hm5C_associated_SNPs_25718 0 0 1 DDX6 POSTAR2 ENCODE chr12:57604984-57605031
64251 chr1 182848473 182848473 1 + G A LIHC 182848482 + 182848462 182848502 41 TAGGAGGAATTGGCCAATTTCTGGCCAAAGCAATTGAACCT TAGGAGGAATTAGCCAATTTCTGGCCAAAGCAATTGAACCT < 41bp 1 0.653784118533914 1 0.717533349990845 experiment 0.692431762932171 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182848482 chr1:182848473 nonsynonymous SNV 0.997 2 12 hm5C_associated_SNPs_25719 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:182848468-182848490
64251 chr22 46611213 46611213 1 + G T LIHC 46611227 + 46611207 46611247 41 GTCCACGCGTGTGAAGGCTGCAAGGTAGAGGGGAGCTGGAA GTCCACTCGTGTGAAGGCTGCAAGGTAGAGGGGAGCTGGAA < 41bp 1 0.651453635595447 1 0.330257624387741 experiment 0.697092728809106 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPARA ENSG00000186951 CDS Human protein_coding chr22:46611227 chr22:46611213 nonsynonymous SNV 0.928 4 7 hm5C_associated_SNPs_25720 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:46611193-46611214
64251 chr2 39009010 39009010 1 + A G LIHC 39009029 + 39009009 39009049 41 AAGGACATCTTACAGCTTCCCAATGAGAGGCCAGGAAGTGT AGGGACATCTTACAGCTTCCCAATGAGAGGCCAGGAAGTGT < 41bp 1 0.26334754243618 1 0.289102971553802 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39009029 chr2:39009010 synonymous SNV . 0 2 hm5C_associated_SNPs_25721 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:39008977-39009011
64251 chr6 151672275 151672275 1 + T C LIHC 151672255 + 151672235 151672275 41 TACCATTATTGAAGAAAGGTCTCCTTCTTGGATATCTGCTT TACCATTATTGAAGAAAGGTCTCCTTCTTGGATATCTGCTC < 41bp 1 0.168237049451102 1 0.221209019422531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151672255 chr6:151672275 nonsynonymous SNV 0.874 2 41 hm5C_associated_SNPs_25722 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151672236-151672347
64251 chr1 24022333 24022333 1 + A G LIHC 24022327 + 24022307 24022347 41 TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG TCAGCATCGCAGACAAGAAGCGCAGGGCAGGCTGCATTGGG < 41bp 1 0.781509742526483 1 0.57056725025177 experiment 0.436980514947034 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022327 chr1:24022333 nonsynonymous SNV 0.998 1 27 hm5C_associated_SNPs_25723 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:24022108-24022375
64251 chr5 82833370 82833370 1 + A G LIHC 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAACAGCCAAGAAAGGGGCAGAATCAGT < 41bp 1 0.3515269862092 1 0.392086207866669 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833370 synonymous SNV . 0 24 hm5C_associated_SNPs_25724 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr22 38470994 38470994 1 + C T LIHC 38470992 + 38470972 38471012 41 GAGGTAGACCTGGCGCACACCACATTGGCCTATGGCCTCAA GAGGTAGACCTGGCGCACACCATATTGGCCTATGGCCTCAA < 41bp 1 0.252822157803848 1 0.447292655706406 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PICK1 ENSG00000100151 CDS Human protein_coding chr22:38470992 chr22:38470994 nonsynonymous SNV 0.126 1 23 hm5C_associated_SNPs_25725 0 0 1 GRWD1 POSTAR2 ENCODE chr22:38470931-38471004
64251 chr10 75871688 75871688 1 + G A LIHC 75871668 + 75871648 75871688 41 CTTCCCGCCATCGACAAAGCCGGGCATCCCAGCCGCTGAGG CTTCCCGCCATCGACAAAGCCGGGCATCCCAGCCGCTGAGA < 41bp 1 0.48045024452835 1 0.742071509361267 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871668 chr10:75871688 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_25726 0 0 3 QKI POSTAR2 ENCODE chr10:75871616-75871699
64251 chr16 8735035 8735035 1 + T C LIHC 8735032 + 8735012 8735052 41 TGGACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTC TGGACTGGCTGAAGGACGACCTCCGCACAGGTGTGTGTTTC < 41bp 1 0.422515843557154 1 0.844781875610352 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735032 chr16:8735035 nonsynonymous SNV 0.954 1 24 hm5C_associated_SNPs_25734 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8734998-8735039
64251 chr3 184037534 184037534 1 + C G LIHC 184037529 + 184037509 184037549 41 CAGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAA CAGTTTCCCACTGGCGTGGCCCCCAGCCCAGTTTTGATGAA < 41bp 1 0.487758140511241 1 0.20311576128006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037529 chr3:184037534 nonsynonymous SNV 0.972 0 26 hm5C_associated_SNPs_25735 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184037534 184037534 1 + C G LIHC 184037530 + 184037510 184037550 41 AGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAAC AGTTTCCCACTGGCGTGGCCCCCAGCCCAGTTTTGATGAAC < 41bp 1 0.235341938802485 1 0.0806664228439331 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037530 chr3:184037534 nonsynonymous SNV 0.972 0 25 hm5C_associated_SNPs_25736 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr3 184037534 184037534 1 + C G LIHC 184037531 + 184037511 184037551 41 GTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACC GTTTCCCACTGGCGTGGCCCCCAGCCCAGTTTTGATGAACC < 41bp 1 0.161294729184044 1 0.350954204797745 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037531 chr3:184037534 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_25737 0 0 9 BUD13 POSTAR2 ENCODE chr3:184037444-184037539
64251 chr7 36445866 36445866 1 + T G LIHC 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAGACCTCTGCTGTCAAATGCCTCGGCAACTCCAG < 41bp 1 0.537058396215402 1 0.436831593513489 experiment 0.925883207569196 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445866 synonymous SNV . 0 19 hm5C_associated_SNPs_25738 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr7 135272402 135272402 1 + T C LIHC 135272419 + 135272399 135272439 41 CCATTTCACTTAGAAGGGACCTGGAACACTTAATGCTTTTG CCACTTCACTTAGAAGGGACCTGGAACACTTAATGCTTTTG < 41bp 1 0.54430544301665 1 0.520798623561859 experiment 0.9113891139667 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135272419 chr7:135272402 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_25739 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr7:135272392-135272424
64251 chr17 57918655 57918655 1 + A G LIHC 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGGCTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT < 41bp 1 0.642575674389237 1 0.170100390911102 experiment 0.714848651221526 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918655 . . 0 4 hm5C_associated_SNPs_25741 0 0 63 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:57918622-57918660
64251 chr17 57918655 57918655 1 + A G LIHC 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG GCTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG < 41bp 1 0.786704485307989 1 0.250228583812714 experiment 0.426591029384022 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918655 . . 0 1 hm5C_associated_SNPs_25742 0 0 63 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:57918622-57918660
64251 chr2 217012902 217012902 1 + A G LIHC 217012900 + 217012880 217012920 41 TCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT TCCTCCCGCTGAGGTGACAACAGAAAGTCAGATTCCTCTCT < 41bp 1 0.746548925010549 1 0.671952843666077 experiment 0.506902149978903 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012900 chr2:217012902 nonsynonymous SNV 0.628 1 23 hm5C_associated_SNPs_25743 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:217012901-217012931
64251 chr7 138944069 138944069 1 + A G LIHC 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAGGGGGAAAAG < 41bp 1 0.511936583220759 1 0.654187023639679 experiment 0.976126833558483 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944069 synonymous SNV . 0 32 hm5C_associated_SNPs_25744 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr11 65347712 65347712 1 + T C LIHC 65347700 + 65347680 65347720 41 TGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCTGCGGGAGG TGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCCGCGGGAGG < 41bp 1 0.635399808416972 1 0.792819678783417 experiment 0.729200383166057 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65347700 chr11:65347712 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_25745 0 0 7 DDX24 POSTAR2 ENCODE chr11:65347701-65347727
64251 chr5 118484603 118484603 1 + A G LIHC 118484585 + 118484565 118484605 41 GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGCCATT GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGCCGTT < 41bp 1 0.0409569016780725 1 0.15932422876358 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118484585 chr5:118484603 synonymous SNV . 0 39 hm5C_associated_SNPs_25747 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:118484577-118484606
64251 chr2 216995635 216995635 1 + A G LIHC 216995625 + 216995605 216995645 41 CTATGGAAGTGATATAGTTCCTTTCTCTAAAGTGGATGAGG CTATGGAAGTGATATAGTTCCTTTCTCTAAGGTGGATGAGG < 41bp 1 0.0552462578189901 1 0.0216287076473236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995625 chr2:216995635 synonymous SNV . 0 31 hm5C_associated_SNPs_25748 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:216995595-216995636
64251 chr2 216995635 216995635 1 + A G LIHC 216995648 + 216995628 216995668 41 TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAG TCTCTAAGGTGGATGAGGAACAAATGAAATATAAATCGGAG < 41bp 1 0.391257752177113 1 0.473851203918457 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995648 chr2:216995635 synonymous SNV . 0 8 hm5C_associated_SNPs_25749 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:216995595-216995636
64251 chr5 102343168 102343168 1 + A G LIHC 102343174 + 102343154 102343194 41 TCTGCAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTT TCTGCAGAGTCTTCGGGGAGCAGTCCTCTGCCAGGCCAGTT < 41bp 1 0.158071149814761 1 0.127884745597839 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAM ENSG00000145730 CDS Human protein_coding chr5:102343174 chr5:102343168 synonymous SNV . 0 15 hm5C_associated_SNPs_25750 0 0 1 RPS3 POSTAR2 ENCODE chr5:102343167-102343261
64251 chr5 78610232 78610232 1 + A C LIHC 78610216 + 78610196 78610236 41 GTTACAGGTAGAAGAGAAAACTGAAGAGGTGGGAGAAGGAA GTTACAGGTAGAAGAGAAAACTGAAGAGGTGGGAGACGGAA < 41bp 1 0.765108550207447 1 0.378466427326202 experiment 0.469782899585106 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JMY ENSG00000152409 CDS Human protein_coding chr5:78610216 chr5:78610232 nonsynonymous SNV 0.679 0 37 hm5C_associated_SNPs_25751 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:78610213-78610239
64251 chr6 43471363 43471363 1 + G C LIHC 43471364 + 43471344 43471384 41 CAGGTCTGTGTCTGTAGGAGCGGTACCGGCTGGACTGCAAC CAGGTCTGTGTCTGTAGGACCGGTACCGGCTGGACTGCAAC < 41bp 1 0.499920433986196 1 0.362479150295258 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TJAP1 ENSG00000137221 CDS Human protein_coding chr6:43471364 chr6:43471363 nonsynonymous SNV 0.998 3 20 hm5C_associated_SNPs_25752 0 0 4 GRWD1 POSTAR2 ENCODE chr6:43471358-43471450
64251 chrX 107910381 107910381 1 + A G LIHC 107910384 + 107910364 107910404 41 TCAACCAGGCTTTGGAAACCCAGGACCCCCTGGACTTCCAG TCAACCAGGCTTTGGAAGCCCAGGACCCCCTGGACTTCCAG < 41bp 1 0.473012369048665 1 0.63249534368515 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107910384 chrX:107910381 nonsynonymous SNV 0.995 1 18 hm5C_associated_SNPs_25753 0 0 4 BUD13 POSTAR2 ENCODE chrX:107910356-107910404
64251 chr16 56872968 56872968 1 + A T LIHC 56872961 + 56872941 56872981 41 TTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGAT TTGACGAGTATCATAGTGGTCATATTGTTAGAGCTTTTGAT < 41bp 1 0.0604699369919819 1 0.0839748978614807 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56872961 chr16:56872968 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_25754 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:56872955-56872975
64251 chr10 45486412 45486412 1 + A G LIHC 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAGGACTGC < 41bp 1 0.0746169525604252 1 0.177373051643372 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486412 synonymous SNV . 0 35 hm5C_associated_SNPs_25755 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr9 72879295 72879295 1 + G T LIHC 72879285 + 72879265 72879305 41 GATCGTTGGAGCCAATGGAACAGGGAAGTCGAGCATTGTGT GATCGTTGGAGCCAATGGAACAGGGAAGTCTAGCATTGTGT < 41bp 1 0.793615585293044 1 0.77043479681015 experiment 0.412768829413912 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC5 ENSG00000198887 CDS Human protein_coding chr9:72879285 chr9:72879295 synonymous SNV . 0 31 hm5C_associated_SNPs_25756 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:72879228-72879298
64251 chr5 179150758 179150758 1 + T A LIHC 179150759 + 179150739 179150779 41 CTTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAA CTTCCTGTGTTCCTGGTTAACCTCTTCTGCTGTTCTGGAAA < 41bp 1 0.111511436859808 1 0.0360018610954285 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150759 chr5:179150758 nonsynonymous SNV 0.951 1 20 hm5C_associated_SNPs_25757 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:179150658-179150763
64251 chr5 179150758 179150758 1 + T A LIHC 179150760 + 179150740 179150780 41 TTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAAG TTCCTGTGTTCCTGGTTAACCTCTTCTGCTGTTCTGGAAAG < 41bp 1 0.297478020483802 1 0.144524693489075 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150760 chr5:179150758 nonsynonymous SNV 0.951 1 19 hm5C_associated_SNPs_25758 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:179150658-179150763
64251 chr11 33308240 33308240 1 + G A LIHC 33308258 + 33308238 33308278 41 AGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCA AGATCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCA < 41bp 1 0.782190907285609 1 0.411663949489594 experiment 0.435618185428782 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308258 chr11:33308240 nonsynonymous SNV 0.994 1 3 hm5C_associated_SNPs_25759 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:33308239-33308240
64251 chr12 58001298 58001298 1 + C T LIHC 58001304 + 58001284 58001324 41 AGCCCCAGAATGGGCGGATGCTGGTCTCTAAGGACGCCACC AGCCCCAGAATGGGTGGATGCTGGTCTCTAAGGACGCCACC < 41bp 1 0.788961873967226 1 0.113515704870224 experiment 0.422076252065547 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001304 chr12:58001298 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_25760 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:58001291-58001311
64251 chr8 17815276 17815276 1 + A G LIHC 17815261 + 17815241 17815281 41 AACAGAAACTTAGACAGTTACAAGATCTTGTTGCTATGGTA AACAGAAACTTAGACAGTTACAAGATCTTGTTGCTGTGGTA < 41bp 1 0.708620756369387 1 0.479204714298248 experiment 0.582758487261227 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17815261 chr8:17815276 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_25766 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17815249-17815282
64251 chr6 42957352 42957352 1 + C T LIHC 42957366 + 42957346 42957386 41 CAGGAGCCCCCCAAGGTTGCCAAATGCACAGCCAAGCCTAG CAGGAGTCCCCCAAGGTTGCCAAATGCACAGCCAAGCCTAG < 41bp 1 0.216097504952095 1 0.780898451805115 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42957366 chr6:42957352 nonsynonymous SNV 0.985 0 7 hm5C_associated_SNPs_25768 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:42957340-42957360
64251 chr1 225284905 225284905 1 + A G LIHC 225284922 + 225284902 225284942 41 TTTATCTTGAACCAGTCTTTCATTCTTCAGAAATACGAAGG TTTGTCTTGAACCAGTCTTTCATTCTTCAGAAATACGAAGG < 41bp 1 0.0246021273381675 1 0.0378066599369049 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAH14 ENSG00000185842 CDS Human protein_coding chr1:225284922 chr1:225284905 nonsynonymous SNV 0.991 1 4 hm5C_associated_SNPs_25784 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:225284894-225284928
64251 chr2 231931711 231931711 1 + C T LIHC 231931696 + 231931676 231931716 41 GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATCGT GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGTATCGT < 41bp 1 0.531048061806363 1 0.0557637214660645 experiment 0.937903876387273 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931696 chr2:231931711 synonymous SNV . 0 36 hm5C_associated_SNPs_25785 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr7 930603 930603 1 + T G LIHC 930607 + 930587 930627 41 GTATCATTTTCTGCACTCAGCGGACGGGGAGGGCTGTGCCA GTATCATTTTCTGCACGCAGCGGACGGGGAGGGCTGTGCCA < 41bp 1 0.380709907013035 1 0.673163652420044 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GET4 ENSG00000239857 CDS Human protein_coding chr7:930607 chr7:930603 nonsynonymous SNV 0.758 2 17 hm5C_associated_SNPs_25786 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:930572-930610
64251 chr10 102748801 102748801 1 + G T LIHC 102748820 + 102748800 102748840 41 TGCCTACCCTTACTCTACCCCGAGGAACGACCTGCTTACCC TTCCTACCCTTACTCTACCCCGAGGAACGACCTGCTTACCC < 41bp 1 0.679326811025599 1 0.899545192718506 experiment 0.641346377948802 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TWNK ENSG00000107815 CDS Human protein_coding chr10:102748820 chr10:102748801 synonymous SNV . 0 2 hm5C_associated_SNPs_25787 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:102748769-102748808
64251 chr6 144875994 144875994 1 + C A LIHC 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TCTATATTCTTCAGCAAGCCCGAAGGGATCCACTCACCAAA < 41bp 1 0.182144976266788 1 0.533278107643127 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144875994 synonymous SNV . 0 24 hm5C_associated_SNPs_25788 0 0 2 GRWD1 POSTAR2 ENCODE chr6:144875978-144876011
64251 chr9 96411461 96411461 1 + T A LIHC 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GCACCAACCGCAAGCGGGTCCACAACGTCACCAACCTCGAG < 41bp 1 0.47942363846724 1 0.405287563800812 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411461 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_25790 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chr12 120878337 120878337 1 + A G LIHC 120878328 + 120878308 120878348 41 AATCCACTTCCAACTGGCTACGAAGATGAATAAAGAGAATC AATCCACTTCCAACTGGCTACGAAGATGAGTAAAGAGAATC < 41bp 1 0.366869113365044 1 0.330143451690674 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120878328 chr12:120878337 synonymous SNV . 0 30 hm5C_associated_SNPs_25791 0 0 8 DDX55 POSTAR2 ENCODE chr12:120878306-120878395
64251 chr17 79970118 79970118 1 + C T LIHC 79970130 + 79970110 79970150 41 TCACCCCTCCAAAAACAGTCCTGGACGACCACACGCAGACC TCACCCCTTCAAAAACAGTCCTGGACGACCACACGCAGACC < 41bp 1 0.687783666471438 1 0.654518842697144 experiment 0.624432667057125 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79970130 chr17:79970118 nonsynonymous SNV 0.027 4 9 hm5C_associated_SNPs_25792 0 0 4 DDX24 POSTAR2 ENCODE chr17:79970109-79970152
64251 chr19 14580184 14580184 1 + G T LIHC 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CATTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC < 41bp 1 0.0567589745647676 1 0.0837321877479553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580184 nonsynonymous SNV 0.370 1 3 hm5C_associated_SNPs_25793 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14580172-14580190
64251 chr19 14580184 14580184 1 + G T LIHC 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG ATTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG < 41bp 1 0.0212692195085179 1 0.0573485493659973 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580184 nonsynonymous SNV 0.370 1 2 hm5C_associated_SNPs_25794 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14580172-14580190
64251 chr1 160323960 160323960 1 + T G LIHC 160323975 + 160323955 160323995 41 TGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC TGCTGGCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC < 41bp 1 0.285545405077149 1 0.0867100059986115 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323975 chr1:160323960 nonsynonymous SNV 0.380 4 6 hm5C_associated_SNPs_25795 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:160323934-160323976
64251 chr5 139060694 139060694 1 + G A LIHC 139060711 + 139060691 139060731 41 GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT GCTATGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT < 41bp 1 0.513885650974874 1 0.321070969104767 experiment 0.972228698050252 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060711 chr5:139060694 nonsynonymous SNV 0.980 2 4 hm5C_associated_SNPs_25796 0 0 4 FXR2 POSTAR2 ENCODE chr5:139060680-139060721
64251 chr12 3047308 3047308 1 + A T LIHC 3047297 + 3047277 3047317 41 CAGAACCATGACAGTTTGCTCTCAAGGTGGCAGAACAGAAC CAGAACCATGACAGTTTGCTCTCAAGGTGGCTGAACAGAAC < 41bp 1 0.616935376277058 1 0.743946850299835 experiment 0.766129247445883 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TULP3 ENSG00000078246 CDS Human protein_coding chr12:3047297 chr12:3047308 nonsynonymous SNV 0.888 4 32 hm5C_associated_SNPs_25797 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:3047288-3047312
64251 chr11 118452209 118452209 1 + G A LIHC 118452203 + 118452183 118452223 41 ATTTTAGAAGATTTGGAGACCCTAAGGCTCTTCTCAAGAGT ATTTTAGAAGATTTGGAGACCCTAAGACTCTTCTCAAGAGT < 41bp 1 0.203939860111198 1 0.117706120014191 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118452203 chr11:118452209 synonymous SNV . 0 27 hm5C_associated_SNPs_25798 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:118452187-118452212
64251 chr20 60882773 60882773 1 + G C LIHC 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCCGGAATGGAG < 41bp 1 0.281715934814791 1 0.399726033210754 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882773 nonsynonymous SNV 0.460 2 32 hm5C_associated_SNPs_25799 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr20 60882773 60882773 1 + G C LIHC 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAACTAGCCCGAGCCCCGCGCCCAGTTCCCGGAATGGAGCC < 41bp 1 0.258085665650182 1 0.431479275226593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882773 nonsynonymous SNV 0.460 2 30 hm5C_associated_SNPs_25800 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60882748-60882773
64251 chr1 154960711 154960711 1 + A C LIHC 154960727 + 154960707 154960747 41 TCCAACCGCTTCACCCATGTCCTCACAGCAGGGGGCATCGG TCCACCCGCTTCACCCATGTCCTCACAGCAGGGGGCATCGG < 41bp 1 0.332225849847546 1 0.0359872281551361 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960727 chr1:154960711 nonsynonymous SNV 0.979 0 5 hm5C_associated_SNPs_25801 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:154960695-154960725
64251 chr3 172098773 172098773 1 + T C LIHC 172098759 + 172098739 172098779 41 GTGGATTTGTATTTCAGCACCTCGAGTAACACAGTTAGAAG GTGGATTTGTATTTCAGCACCTCGAGTAACACAGCTAGAAG < 41bp 1 0.562049723766827 1 0.716703236103058 experiment 0.875900552466346 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172098759 chr3:172098773 synonymous SNV . 0 35 hm5C_associated_SNPs_25802 0 0 2 DGCR8 POSTAR2 ENCODE chr3:172098728-172098773
64251 chr3 172098773 172098773 1 + T C LIHC 172098770 + 172098750 172098790 41 TTTCAGCACCTCGAGTAACACAGTTAGAAGGAAATTCATGT TTTCAGCACCTCGAGTAACACAGCTAGAAGGAAATTCATGT < 41bp 1 0.219243280622569 1 0.480669736862183 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172098770 chr3:172098773 synonymous SNV . 0 24 hm5C_associated_SNPs_25803 0 0 2 DGCR8 POSTAR2 ENCODE chr3:172098728-172098773
64251 chr2 27449453 27449453 1 + A G LIHC 27449451 + 27449431 27449471 41 CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTT CTCTGCCCTGGCCAGTAAGGCCGCAGGTTATCCACTGGCTT < 41bp 1 0.260059835545723 1 0.123455911874771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27449451 chr2:27449453 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_25804 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:27449440-27449460
64251 chr2 85133149 85133149 1 + A G LIHC 85133155 + 85133135 85133175 41 TAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCA TAAGAAAATGGCAGGCAAACCAGACATGGGGGAAATCGCCA < 41bp 1 0.4563068353025 1 0.229987591505051 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMSB10 ENSG00000034510 CDS Human protein_coding chr2:85133155 chr2:85133149 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_25805 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:85133132-85133163
64251 chr6 80741219 80741219 1 + G T LIHC 80741213 + 80741193 80741233 41 TCTTCTTCAGCAAATGAATGCATTTCGGTTAAAGGAAGAAT TCTTCTTCAGCAAATGAATGCATTTCTGTTAAAGGAAGAAT < 41bp 1 0.0285053970717785 1 0.0967293381690979 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTK ENSG00000112742 CDS Human protein_coding chr6:80741213 chr6:80741219 synonymous SNV . 0 27 hm5C_associated_SNPs_25806 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr6:80741199-80741222
64251 chr11 34969131 34969131 1 + A G LIHC 34969143 + 34969123 34969163 41 AAGTGATGATGGAATCTTGGCCAAAATCGTGGTAAGTTTTT AAGTGATGGTGGAATCTTGGCCAAAATCGTGGTAAGTTTTT < 41bp 1 0.205219330664924 1 0.298294544219971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969143 chr11:34969131 nonsynonymous SNV 0.929 4 9 hm5C_associated_SNPs_25807 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:34969050-34969141
64251 chr11 34969131 34969131 1 + A G LIHC 34969150 + 34969130 34969170 41 GATGGAATCTTGGCCAAAATCGTGGTAAGTTTTTATTTTAA GGTGGAATCTTGGCCAAAATCGTGGTAAGTTTTTATTTTAA < 41bp 1 0.723349036693129 1 0.909795165061951 experiment 0.553301926613742 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969150 chr11:34969131 nonsynonymous SNV 0.929 4 2 hm5C_associated_SNPs_25808 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:34969050-34969141
64251 chr12 98941414 98941414 1 + G T LIHC 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGGCCGGCCATTAGAACTCAGTGATTTCAGTATGGAGGA < 41bp 1 0.735511691770511 1 0.408891618251801 experiment 0.528976616458978 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941414 nonsynonymous SNV 0.999 0 33 hm5C_associated_SNPs_25809 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:98941372-98941431
64251 chr16 2732726 2732726 1 + G A LIHC 2732745 + 2732725 2732765 41 GGCAGACCCTGTGCCGGGACCCGAAATCCTTCCTGTACCGC GACAGACCCTGTGCCGGGACCCGAAATCCTTCCTGTACCGC < 41bp 1 0.481993528134943 1 0.316028654575348 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2732745 chr16:2732726 synonymous SNV . 0 2 hm5C_associated_SNPs_25811 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:2732720-2732740
64251 chr16 67917569 67917569 1 + T C LIHC 67917568 + 67917548 67917588 41 ACCCTGCCCGCTCTCCCAGCCTGTGCTCCTTTCCCTCATCC ACCCTGCCCGCTCTCCCAGCCCGTGCTCCTTTCCCTCATCC < 41bp 1 0.147857486754482 1 0.255687654018402 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917568 chr16:67917569 synonymous SNV . 0 22 hm5C_associated_SNPs_25812 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:67917537-67917569
64251 chr20 37168585 37168585 1 + A G LIHC 37168578 + 37168558 37168598 41 TCTGTGTCTGGCTGACAGAGCACCCTGATATGCTTGATGAA TCTGTGTCTGGCTGACAGAGCACCCTGGTATGCTTGATGAA < 41bp 1 0.183495026601548 1 0.134437590837479 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37168578 chr20:37168585 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_25813 0 0 2 EIF3H POSTAR2 ENCODE chr20:37168522-37168601
64251 chr21 47864704 47864704 1 + A G LIHC 47864706 + 47864686 47864726 41 ATTCACCATTTAGAAGTGATCCAGCAAAGATTGGGAGGGGT ATTCACCATTTAGAAGTGGTCCAGCAAAGATTGGGAGGGGT < 41bp 1 0.0386767103236338 1 0.177810996770859 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47864706 chr21:47864704 nonsynonymous SNV 0.856 0 19 hm5C_associated_SNPs_25814 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:47864689-47864705
64251 chr1 26136290 26136290 1 + G T LIHC 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCT < 41bp 1 0.106253087332883 1 0.0402098894119263 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136290 nonsynonymous SNV 0.998 2 41 hm5C_associated_SNPs_25815 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136290 26136290 1 + G T LIHC 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCTGCT < 41bp 1 0.106304948217803 1 0.0725802183151245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136290 nonsynonymous SNV 0.998 2 38 hm5C_associated_SNPs_25816 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136290 26136290 1 + G T LIHC 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCTGCTC < 41bp 1 0.473245073869377 1 0.0473699569702148 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136290 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_25817 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr12 57627867 57627867 1 + T C LIHC 57627865 + 57627845 57627885 41 TTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAG TTTATAGATGAAGGGGTCAACACTGGCTTAGAGGTGAAGAG < 41bp 1 0.491602826173323 1 0.237368732690811 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627865 chr12:57627867 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_25818 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57627798-57627891
64251 chr14 23237290 23237290 1 + G T LIHC 23237294 + 23237274 23237314 41 CGCTGAACTGGGGCTGGGGTCATACACCCCAGTGGGACTGA CGCTGAACTGGGGCTGTGGTCATACACCCCAGTGGGACTGA < 41bp 1 0.302132915787293 1 0.291755557060242 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23237294 chr14:23237290 nonsynonymous SNV 0.956 4 17 hm5C_associated_SNPs_25819 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:23237248-23237335
64251 chr14 102805186 102805186 1 + C A LIHC 102805183 + 102805163 102805203 41 CATTAGGAATCACAGAATTCCTACGGAAGAAAGAAATACAC CATTAGGAATCACAGAATTCCTAAGGAAGAAAGAAATACAC < 41bp 1 0.403674798261729 1 0.611805379390717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102805183 chr14:102805186 synonymous SNV . 0 24 hm5C_associated_SNPs_25820 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102805175-102805210
64251 chr17 8347657 8347657 1 + C A LIHC 8347653 + 8347633 8347673 41 AAACTGCTTATTGGAAGGAACTTTCCTTGAAGTATAAGCAA AAACTGCTTATTGGAAGGAACTTTACTTGAAGTATAAGCAA < 41bp 1 0.19124040006005 1 0.25588783621788 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDEL1 ENSG00000166579 CDS Human protein_coding chr17:8347653 chr17:8347657 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_25821 0 0 2 PPIG POSTAR2 ENCODE chr17:8347610-8347676
64251 chr1 29068969 29068969 1 + T C LIHC 29068982 + 29068962 29069002 41 CAGTCCCTCCATTGGCTTCTCCTATTCTTTGGGTGAAGCTG CAGTCCCCCCATTGGCTTCTCCTATTCTTTGGGTGAAGCTG < 41bp 1 0.0423568517943199 1 0.0879116058349609 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29068982 chr1:29068969 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_25825 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr4 52740446 52740446 1 + G T LIHC 52740449 + 52740429 52740469 41 TTTTGTAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT TTTTGTAGGAAGTCTGCTGTCTTGCAGTTCTTCAGACTGCT < 41bp 1 0.319020701841142 1 0.0476633906364441 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52740449 chr4:52740446 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_25827 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:52740434-52740474
64251 chr6 35436190 35436190 1 + G T LIHC 35436189 + 35436169 35436209 41 AGACATGCTAGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAG AGACATGCTAGTCTCTTTTCCTGTTAGCGCGGCGTGAGAAG < 41bp 1 0.221198592577637 1 0.173625379800797 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436189 chr6:35436190 . . 0 22 hm5C_associated_SNPs_25828 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436190 35436190 1 + G T LIHC 35436198 + 35436178 35436218 41 AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT AGTCTCTTTTCCTGTTAGCGCGGCGTGAGAAGCCATGAGGT < 41bp 1 0.65981147860538 1 0.863893330097198 experiment 0.68037704278924 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436198 chr6:35436190 . . 0 13 hm5C_associated_SNPs_25829 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr6 35436190 35436190 1 + G T LIHC 35436201 + 35436181 35436221 41 CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG CTCTTTTCCTGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG < 41bp 1 0.357104620045457 1 0.466919541358948 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 UTR5 Human protein_coding chr6:35436201 chr6:35436190 . . 0 10 hm5C_associated_SNPs_25830 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35436180-35436200
64251 chr7 27833974 27833974 1 + G T LIHC 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAATGTCTTCACAAAGAAAACTGGGAATCAGCAGAAAGTGA < 41bp 1 0.677637102803692 1 0.191536754369736 experiment 0.644725794392616 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833974 synonymous SNV . 0 22 hm5C_associated_SNPs_25831 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833950-27833986
64251 chr8 61757431 61757431 1 + G T LIHC 61757430 + 61757410 61757450 41 ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCC ATTTGCTTTGCAGTTGGGGACTGTGGACAGACATTCTTTCC < 41bp 1 0.150249501465071 1 0.17304664850235 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757430 chr8:61757431 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_25832 0 0 3 PPIG POSTAR2 ENCODE chr8:61757421-61757455
64251 chr10 112583335 112583335 1 + A G LIHC 112583337 + 112583317 112583357 41 TTCTTTGCCCTCTTGGGAACCAGAGGATGTGTTCAGTGAAC TTCTTTGCCCTCTTGGGAGCCAGAGGATGTGTTCAGTGAAC < 41bp 1 0.343986497271201 1 0.851433217525482 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RBM20 ENSG00000203867 CDS Human protein_coding chr10:112583337 chr10:112583335 synonymous SNV . 0 19 hm5C_associated_SNPs_25833 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:112583319-112583356
64251 chr14 23794468 23794468 1 + A G LIHC 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCCGGGCTAGGGCGACATCATG < 41bp 1 0.285137462449291 1 0.358551055192947 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794468 synonymous SNV . 0 30 hm5C_associated_SNPs_25834 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr14 23794468 23794468 1 + A G LIHC 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCCGGGCTAGGGCGACATCATGG < 41bp 1 0.437587404265402 1 0.500105679035187 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794468 synonymous SNV . 0 29 hm5C_associated_SNPs_25835 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr17 65822352 65822352 1 + A G LIHC 65822356 + 65822336 65822376 41 ATGGAAGAGGACGACGATGACTCCGATTATCCGGAGGAGAT ATGGAAGAGGACGACGGTGACTCCGATTATCCGGAGGAGAT < 41bp 1 0.529721878023774 1 0.293176829814911 experiment 0.940556243952451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822356 chr17:65822352 nonsynonymous SNV 0.998 1 17 hm5C_associated_SNPs_25837 0 0 21 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr17 65822352 65822352 1 + A G LIHC 65822358 + 65822338 65822378 41 GGAAGAGGACGACGATGACTCCGATTATCCGGAGGAGATGG GGAAGAGGACGACGGTGACTCCGATTATCCGGAGGAGATGG < 41bp 1 0.187787344910376 1 0.0952989161014557 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822358 chr17:65822352 nonsynonymous SNV 0.998 1 15 hm5C_associated_SNPs_25838 0 0 21 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr17 65822352 65822352 1 + A G LIHC 65822366 + 65822346 65822386 41 ACGACGATGACTCCGATTATCCGGAGGAGATGGAAGACGAC ACGACGGTGACTCCGATTATCCGGAGGAGATGGAAGACGAC < 41bp 1 0.692619300006388 1 0.841845452785492 experiment 0.614761399987225 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822366 chr17:65822352 nonsynonymous SNV 0.998 1 7 hm5C_associated_SNPs_25839 0 0 21 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr1 117641477 117641477 1 + G T LIHC 117641459 + 117641439 117641479 41 AGCTGTCTTCTAACAGGAATCCATCACTTGAAGATCAAGCT AGCTGTCTTCTAACAGGAATCCATCACTTGAAGATCAATCT < 41bp 1 0.0279117180613646 1 0.218562304973602 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117641459 chr1:117641477 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_25841 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117641455-117641478
64251 chr3 10123051 10123051 1 + G T LIHC 10123048 + 10123028 10123068 41 AGTGTTTAGCTGCTGAGAATCACGGTGTAGTTGATGGACCA AGTGTTTAGCTGCTGAGAATCACTGTGTAGTTGATGGACCA < 41bp 1 0.309834339295529 1 0.420271694660187 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10123048 chr3:10123051 nonsynonymous SNV 0.000 4 24 hm5C_associated_SNPs_25843 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10123029-10123103
64251 chr12 62783254 62783254 1 + G T LIHC 62783266 + 62783246 62783286 41 AGATCTTTGTACAGCATTGTCTGCTTTGTCAGGAATACCTG AGATCTTTTTACAGCATTGTCTGCTTTGTCAGGAATACCTG < 41bp 1 0.473290299536942 1 0.206179052591324 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP15 ENSG00000135655 CDS Human protein_coding chr12:62783266 chr12:62783254 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_25844 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:62783233-62783263
64251 chr21 45534116 45534116 1 + T C LIHC 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGCACCACTTCCACCTCAAGGGCTCTGTGCACAG < 41bp 1 0.494295565393237 1 0.236419141292572 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534116 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_25845 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr21:45534090-45534121
64251 chr1 20224100 20224100 1 + A G LIHC 20224116 + 20224096 20224136 41 TACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACC TACGGCAGTGTTCGGAGGATCAATGACAACTCAGAGGCACC < 41bp 1 0.276910552537348 1 0.238199561834335 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20224116 chr1:20224100 nonsynonymous SNV 0.994 2 5 hm5C_associated_SNPs_25846 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:20224048-20224147
64251 chr1 12027091 12027091 1 + T C LIHC 12027087 + 12027067 12027107 41 CCCCATCTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG CCCCATCTTCACGGAGGTGGCCTGCGATGAGCTGGTGGAGG < 41bp 1 0.151128847756659 1 0.212949156761169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027087 chr1:12027091 synonymous SNV . 0 25 hm5C_associated_SNPs_25848 0 0 8 DDX24 POSTAR2 ENCODE chr1:12027089-12027143
64251 chr1 28599950 28599950 1 + A G LIHC 28599931 + 28599911 28599951 41 ATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGAC ATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGGC < 41bp 1 0.155380565618442 1 0.349448561668396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28599931 chr1:28599950 nonsynonymous SNV 0.439 0 40 hm5C_associated_SNPs_25849 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28599928-28599962
64251 chr1 222837351 222837351 1 + T C LIHC 222837353 + 222837333 222837373 41 TCTGCAGGTTAATATGGCTCCAAAAGGGCCCCCTCCTTTCC TCTGCAGGTTAATATGGCCCCAAAAGGGCCCCCTCCTTTCC < 41bp 1 0.574005377285674 1 0.190613895654678 experiment 0.851989245428653 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222837353 chr1:222837351 synonymous SNV . 0 19 hm5C_associated_SNPs_25850 0 0 1 SF3B4 POSTAR2 ENCODE chr1:222837271-222837370
64251 chr2 10264891 10264891 1 + C A LIHC 10264882 + 10264862 10264902 41 GAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCA GAAGTTCAGATTACAGAAGCCCGCTGTTTATATGGCTTCCA < 41bp 1 0.210590197197428 1 0.0560451149940491 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRM2 ENSG00000171848 CDS Human protein_coding chr2:10264882 chr2:10264891 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_25851 0 0 1 GRWD1 POSTAR2 ENCODE chr2:10264846-10264892
64251 chr2 32362205 32362205 1 + C A LIHC 32362198 + 32362178 32362218 41 GTACAGTCTGCTGGAGATGACAGAGTACTTGTAATGGGTGC GTACAGTCTGCTGGAGATGACAGAGTAATTGTAATGGGTGC < 41bp 1 0.520328892973129 1 0.886602640151978 experiment 0.959342214053741 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32362198 chr2:32362205 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_25852 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:32362196-32362227
64251 chr4 174239650 174239650 1 + A G LIHC 174239643 + 174239623 174239663 41 CCAGTGTTTGACAAAGGGAGCTGATGGATCAAAAGTTATGA CCAGTGTTTGACAAAGGGAGCTGATGGGTCAAAAGTTATGA < 41bp 1 0.201990598877895 1 0.0744695067405701 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174239643 chr4:174239650 synonymous SNV . 0 28 hm5C_associated_SNPs_25853 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr4:174239603-174239652
64251 chr5 54640987 54640987 1 + C A LIHC 54640986 + 54640966 54641006 41 TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC TCGAGATGCAGGTGATTTGGCAAAAGGAGACCAGAAAGGGC < 41bp 1 0.756651007960428 1 0.73628294467926 experiment 0.486697984079145 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640986 chr5:54640987 synonymous SNV . 0 22 hm5C_associated_SNPs_25854 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr5 54640987 54640987 1 + C A LIHC 54640997 + 54640977 54641017 41 GTGATTTGGCCAAAGGAGACCAGAAAGGGCGGAAAGGAGGA GTGATTTGGCAAAAGGAGACCAGAAAGGGCGGAAAGGAGGA < 41bp 1 0.681962353202799 1 0.50161749124527 experiment 0.636075293594402 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640997 chr5:54640987 synonymous SNV . 0 11 hm5C_associated_SNPs_25855 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr5 54640987 54640987 1 + C A LIHC 54641006 + 54640986 54641026 41 CCAAAGGAGACCAGAAAGGGCGGAAAGGAGGAACAAAAGGT CAAAAGGAGACCAGAAAGGGCGGAAAGGAGGAACAAAAGGT < 41bp 1 0.638367365689579 1 0.41109561920166 experiment 0.723265268620841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54641006 chr5:54640987 synonymous SNV . 0 2 hm5C_associated_SNPs_25856 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr7 77227167 77227167 1 + A G LIHC 77227168 + 77227148 77227188 41 TCTTTATTTAGGAGGATGAACAAGCAAGAACAGACTACTTC TCTTTATTTAGGAGGATGAGCAAGCAAGAACAGACTACTTC < 41bp 1 0.348686040929661 1 0.244753360748291 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77227168 chr7:77227167 synonymous SNV . 0 20 hm5C_associated_SNPs_25857 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:77227148-77227169
64251 chr8 56922510 56922510 1 + C T LIHC 56922491 + 56922471 56922511 41 AACTAATGCCGACGTGATGACCGCCCTGTCCCAGGGCTACA AACTAATGCCGACGTGATGACCGCCCTGTCCCAGGGCTATA < 41bp 1 0.245664638968194 1 0.021828830242157 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56922491 chr8:56922510 synonymous SNV . 0 40 hm5C_associated_SNPs_25859 0 0 3 FMR1 POSTAR2 ENCODE chr8:56922467-56922550
64251 chr9 131011001 131011001 1 + C A LIHC 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACCGTGAGGGACCTCATGCACAAGACCATCATG < 41bp 1 0.378632631085462 1 0.0961782932281494 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131011001 nonsynonymous SNV 0.995 4 28 hm5C_associated_SNPs_25860 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr11 70260723 70260723 1 + G A LIHC 70260737 + 70260717 70260757 41 TTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCA TTCGGAAGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCA < 41bp 1 0.740428869089749 1 0.206141352653503 experiment 0.519142261820501 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70260737 chr11:70260723 nonsynonymous SNV 0.993 4 7 hm5C_associated_SNPs_25861 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:70260686-70260740
64251 chr12 69128527 69128527 1 + A T LIHC 69128531 + 69128511 69128551 41 GTGGTTTAAGCATATGAATTCAGTTCCACAAAAACCTGCTT GTGGTTTAAGCATATGTATTCAGTTCCACAAAAACCTGCTT < 41bp 1 0.21705692204965 1 0.397006869316101 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69128531 chr12:69128527 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_25862 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69128511-69128600
64251 chr15 32920987 32920987 1 + T C LIHC 32920986 + 32920966 32921006 41 CAGAACACCTTCTATTACACCTCAAGAAGAAAGAATTGGTA CAGAACACCTTCTATTACACCCCAAGAAGAAAGAATTGGTA < 41bp 1 0.190850047487882 1 0.179572522640228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32920986 chr15:32920987 synonymous SNV . 0 22 hm5C_associated_SNPs_25863 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:32920968-32920991
64251 chr17 57918682 57918682 1 + C A LIHC 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGACTGTTGAATCTCATGGCAACACCAGTAGATGGGCTGT < 41bp 1 0.65596699958465 1 0.251940101385117 experiment 0.688066000830699 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918682 . . 0 31 hm5C_associated_SNPs_25865 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr17 57918682 57918682 1 + C A LIHC 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG ACTGTTGAATCTCATGGCAACACCAGTAGATGGGCTGTCTG < 41bp 1 0.767785996865031 1 0.210229068994522 experiment 0.464428006269939 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918682 . . 0 28 hm5C_associated_SNPs_25866 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr17 67515549 67515549 1 + C A LIHC 67515562 + 67515542 67515582 41 CTGTCACCTTTTATGGCGCACTGTTTCGGGAGGTAGGTGAC CTGTCACATTTTATGGCGCACTGTTTCGGGAGGTAGGTGAC < 41bp 1 0.195467493567793 1 0.0263736248016357 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K6 ENSG00000108984 CDS Human protein_coding chr17:67515562 chr17:67515549 synonymous SNV . 0 8 hm5C_associated_SNPs_25867 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:67515544-67515573
64251 chr18 48446834 48446834 1 + G T LIHC 48446838 + 48446818 48446858 41 GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCGAAGA GTTTTTAGATATGGCCTGAACACACTCATTCAGTTCGAAGA < 41bp 1 0.327048180614978 1 0.209652632474899 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ME2 ENSG00000082212 CDS Human protein_coding chr18:48446838 chr18:48446834 nonsynonymous SNV 0.946 1 17 hm5C_associated_SNPs_25868 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:48446820-48446840
64251 chr19 49469542 49469542 1 + C T LIHC 49469530 + 49469510 49469550 41 TTCTGAGCCATTTCTCCCTTCTATATAGAAGCCAGCTGAAG TTCTGAGCCATTTCTCCCTTCTATATAGAAGCTAGCTGAAG < 41bp 1 0.3218383843243 1 0.817295074462891 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469530 chr19:49469542 nonsynonymous SNV 0.797 2 33 hm5C_associated_SNPs_25869 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:49469540-49469560
64251 chrX 47065756 47065756 1 + G A LIHC 47065738 + 47065718 47065758 41 GGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCGTA GGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCATA < 41bp 1 0.27777704339005 1 0.0701326727867126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47065738 chrX:47065756 synonymous SNV . 0 39 hm5C_associated_SNPs_25871 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:47065740-47065760
64251 chr16 90028226 90028226 1 + T C LIHC 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACGACCTGGCTGCGATCCCTGCACGCGTTGTACACAA < 41bp 1 0.377456666872564 1 0.280555903911591 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028226 nonsynonymous SNV 0.913 1 17 hm5C_associated_SNPs_25872 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr16 90028226 90028226 1 + T C LIHC 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACGACCTGGCTGCGATCCCTGCACGCGTTGTACACAAC < 41bp 1 0.103183821568442 1 0.182238101959229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028226 nonsynonymous SNV 0.913 1 16 hm5C_associated_SNPs_25873 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr22 40660706 40660706 1 + G A LIHC 40660713 + 40660693 40660733 41 CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATT CTCAACCCTTGGAAGTGCTGCTGCTTCAAATTATGCAAATT < 41bp 1 0.0623781077107269 1 0.0520219206809998 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40660713 chr22:40660706 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_25874 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40660691-40660715
64251 chr3 128973580 128973580 1 + C A LIHC 128973582 + 128973562 128973602 41 GCGAGCCCTCTGCCAGATCACTGATGTGAGTCGTGCCGGTT GCGAGCCCTCTGCCAGATAACTGATGTGAGTCGTGCCGGTT < 41bp 1 0.702787341305667 1 0.116607636213303 experiment 0.594425317388666 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973582 chr3:128973580 synonymous SNV . 0 19 hm5C_associated_SNPs_25875 0 0 5 BUD13 POSTAR2 ENCODE chr3:128973465-128973586
64251 chr19 11548763 11548763 1 + C T LIHC 11548761 + 11548741 11548781 41 GGCTATAAGCCCCTGTATATCCCCTCCAACCGGGTCAACGA GGCTATAAGCCCCTGTATATCCTCTCCAACCGGGTCAACGA < 41bp 1 0.14096403910502 1 0.0706776976585388 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548761 chr19:11548763 nonsynonymous SNV 0.908 0 23 hm5C_associated_SNPs_25877 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11548744-11548775
64251 chrX 153628235 153628235 1 + C A LIHC 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGCTCCACCCCTTACACGTCATCCGCAT < 41bp 1 0.375309758013194 1 0.0475526750087738 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628235 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_25878 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr3 184021755 184021755 1 + T C LIHC 184021744 + 184021724 184021764 41 GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTGTGGCATAGTG GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTGCGGCATAGTG < 41bp 1 0.134068586381265 1 0.0910423398017883 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021744 chr3:184021755 synonymous SNV . 0 32 hm5C_associated_SNPs_25879 0 0 20 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184021720-184021789
64251 chr17 38318311 38318311 1 + T C LIHC 38318298 + 38318278 38318318 41 CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGACGATGATG < 41bp 1 0.211439469019321 1 0.0334231853485107 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318298 chr17:38318311 synonymous SNV . 0 34 hm5C_associated_SNPs_25880 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr17 38318311 38318311 1 + T C LIHC 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGGTAAAAAGGGCCCTAAGCATTTGGACGATGATGAAGAT < 41bp 1 0.142045612911974 1 0.191481173038483 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318311 synonymous SNV . 0 29 hm5C_associated_SNPs_25881 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr5 34925045 34925045 1 + T G LIHC 34925039 + 34925019 34925059 41 TCCAGGGAAGTTTTGGAGGACCAACTTTATATGAAAATCCT TCCAGGGAAGTTTTGGAGGACCAACTGTATATGAAAATCCT < 41bp 1 0.0716929534569446 1 0.0555792152881622 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRIX1 ENSG00000113460 CDS Human protein_coding chr5:34925039 chr5:34925045 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_25882 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:34925011-34925051
64251 chr5 34925045 34925045 1 + T G LIHC 34925040 + 34925020 34925060 41 CCAGGGAAGTTTTGGAGGACCAACTTTATATGAAAATCCTC CCAGGGAAGTTTTGGAGGACCAACTGTATATGAAAATCCTC < 41bp 1 0.469779293892907 1 0.0786592960357666 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BRIX1 ENSG00000113460 CDS Human protein_coding chr5:34925040 chr5:34925045 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_25883 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:34925011-34925051
64251 chr17 57754422 57754422 1 + C T LIHC 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG ATCTACATAGACAGTAATAACAACCTGGAGAGATTTCTTCG < 41bp 1 0.327527671398896 1 0.0852772295475006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754422 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_25886 0 0 24 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr1 27106821 27106821 1 + G A LIHC 27106819 + 27106799 27106839 41 CCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCACT CCACACCCCCCTTCAGCCGCCTAGAGAAGTTGTATAGCACT < 41bp 1 0.319375603396415 1 0.481923013925552 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27106819 chr1:27106821 synonymous SNV . 0 23 hm5C_associated_SNPs_25887 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:27106760-27106840
64251 chr1 110210742 110210742 1 + C T LIHC 110210743 + 110210723 110210763 41 ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTGGAA ACAGCAACCAGCACCATGCTCATGACACTGGGGTACTGGAA < 41bp 1 0.701509455848847 1 0.178081274032593 experiment 0.596981088302305 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110210743 chr1:110210742 nonsynonymous SNV 0.042 1 20 hm5C_associated_SNPs_25888 0 0 2 DDX3X POSTAR2 ENCODE chr1:110210694-110210774
64251 chr3 42166969 42166969 1 + A G LIHC 42166968 + 42166948 42166988 41 TCATTAGCCTGCTGGAGGAGCAGCTGCCCCATTATAAGTTA TCATTAGCCTGCTGGAGGAGCGGCTGCCCCATTATAAGTTA < 41bp 1 0.371725810662917 1 0.322656035423279 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42166968 chr3:42166969 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_25889 0 0 2 GRWD1 POSTAR2 ENCODE chr3:42166943-42167011
64251 chr5 10254912 10254912 1 + A G LIHC 10254899 + 10254879 10254919 41 TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGAT TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCGGGATGAT < 41bp 1 0.15302101209304 1 0.0909264981746674 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254899 chr5:10254912 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_25890 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254912 10254912 1 + A G LIHC 10254903 + 10254883 10254923 41 CAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA CAAGCTGATGGTGGAACTGTCCAAGTCTCGGGATGATGAAA < 41bp 1 0.235093750754405 1 0.194056212902069 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254903 chr5:10254912 nonsynonymous SNV 0.999 3 30 hm5C_associated_SNPs_25891 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254912 10254912 1 + A G LIHC 10254909 + 10254889 10254929 41 GATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAG GATGGTGGAACTGTCCAAGTCTCGGGATGATGAAATTGGAG < 41bp 1 0.787644199149313 1 0.701202273368835 experiment 0.424711601701373 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254909 chr5:10254912 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_25892 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr6 160481652 160481652 1 + T C LIHC 160481661 + 160481641 160481681 41 AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCG AAATTCCTGCACCAAGATATCGACTCTGGGCAAGGGATCCG < 41bp 1 0.195989018254295 1 0.260136365890503 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160481661 chr6:160481652 synonymous SNV . 0 12 hm5C_associated_SNPs_25893 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:160481618-160481664
64251 chr7 98563383 98563383 1 + G A LIHC 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATGAGCATAGAGATGCGGAAGAACTT < 41bp 1 0.0910630681335852 1 0.325062096118927 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563383 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_25894 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:98563359-98563383
64251 chr9 2186199 2186199 1 + A G LIHC 2186182 + 2186162 2186202 41 GAAGAGAGTGAGGATGAAAGCAATGAAGAGGAGGAAGAGGA GAAGAGAGTGAGGATGAAAGCAATGAAGAGGAGGAAGGGGA < 41bp 1 0.33552812224686 1 0.328797906637192 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186182 chr9:2186199 nonsynonymous SNV 0.982 0 38 hm5C_associated_SNPs_25895 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:2186189-2186215
64251 chr12 88439522 88439522 1 + A G LIHC 88439525 + 88439505 88439545 41 TTAGAACAAACACTGGAACTCATAGGAACAAATATCAATGG TTAGAACAAACACTGGAGCTCATAGGAACAAATATCAATGG < 41bp 1 0.41986679631235 1 0.252210050821304 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88439525 chr12:88439522 synonymous SNV . 0 18 hm5C_associated_SNPs_25897 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:88439477-88439540
64251 chr12 105519803 105519803 1 + G T LIHC 105519783 + 105519763 105519803 41 TTCAATGTTTCCTGTCTAGGCCTGTATAGAACAACAATTTG TTCAATGTTTCCTGTCTAGGCCTGTATAGAACAACAATTTT < 41bp 1 0.105257882804693 1 0.0648104250431061 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519783 chr12:105519803 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_25898 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:105519795-105519831
64251 chr12 105519803 105519803 1 + G T LIHC 105519794 + 105519774 105519814 41 CTGTCTAGGCCTGTATAGAACAACAATTTGATTCTCTCAAT CTGTCTAGGCCTGTATAGAACAACAATTTTATTCTCTCAAT < 41bp 1 0.699373423204141 1 0.163630723953247 experiment 0.601253153591718 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519794 chr12:105519803 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_25899 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:105519795-105519831
64251 chr14 102469021 102469021 1 + G A LIHC 102469036 + 102469016 102469056 41 CAGTGGAAACCCAGCGGTTTCAGAGGTATGGCCTCCAGCCA CAGTGAAAACCCAGCGGTTTCAGAGGTATGGCCTCCAGCCA < 41bp 1 0.428116607688 1 0.789078831672668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102469036 chr14:102469021 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_25900 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102468989-102469025
64251 chr14 105175662 105175662 1 + C T LIHC 105175682 + 105175662 105175702 41 CCAAGTTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTC TCAAGTTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTC < 41bp 1 0.509190713929781 1 0.79532265663147 experiment 0.981618572140438 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105175682 chr14:105175662 nonsynonymous SNV 0.771 0 1 hm5C_associated_SNPs_25901 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105175636-105175676
64251 chr17 40646474 40646474 1 + C A LIHC 40646461 + 40646441 40646481 41 TGGATGGTACTGAGGGAGAGCCGGATCCTTTCCCAGAAGAA TGGATGGTACTGAGGGAGAGCCGGATCCTTTCCAAGAAGAA < 41bp 1 0.40937810705251 1 0.461233615875244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40646461 chr17:40646474 nonsynonymous SNV 0.997 2 34 hm5C_associated_SNPs_25902 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr17:40646368-40646476
64251 chr17 79652703 79652703 1 + C A LIHC 79652714 + 79652694 79652734 41 GACCTGATCCGCCAAGGGGACACACAGTGAGTTAGCGGGGC GACCTGATCAGCCAAGGGGACACACAGTGAGTTAGCGGGGC < 41bp 1 0.19339666464321 1 0.172797322273254 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79652714 chr17:79652703 nonsynonymous SNV 0.993 4 10 hm5C_associated_SNPs_25903 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:79652658-79652715
64251 chr22 44368128 44368128 1 + T C LIHC 44368123 + 44368103 44368143 41 TTTTTTTATTTAGGTGATGACGCACTTCCAAATGGGTTAGA TTTTTTTATTTAGGTGATGACGCACCTCCAAATGGGTTAGA < 41bp 1 0.132493782428269 1 0.115612179040909 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44368123 chr22:44368128 nonsynonymous SNV 0.898 1 26 hm5C_associated_SNPs_25904 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr22:44368118-44368163
64251 chrX 41200777 41200777 1 + A G LIHC 41200758 + 41200738 41200778 41 TTTCTACGATAAAGACAGTTCAGGGTGGAGTTCTAGCAAAG TTTCTACGATAAAGACAGTTCAGGGTGGAGTTCTAGCAAGG < 41bp 1 0.718967646035244 1 0.675841927528381 experiment 0.562064707929512 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41200758 chrX:41200777 synonymous SNV . 0 40 hm5C_associated_SNPs_25905 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:41200697-41200786
64251 chrX 41200777 41200777 1 + A G LIHC 41200770 + 41200750 41200790 41 AGACAGTTCAGGGTGGAGTTCTAGCAAAGATAAGGATGCGT AGACAGTTCAGGGTGGAGTTCTAGCAAGGATAAGGATGCGT < 41bp 1 0.341481147113755 1 0.0903386771678925 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41200770 chrX:41200777 synonymous SNV . 0 28 hm5C_associated_SNPs_25906 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:41200697-41200786
64251 chrX 64956691 64956691 1 + A G LIHC 64956685 + 64956665 64956705 41 TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAGAAGGAG TGGAAAATGAGAAGAAGAAGCGTGAAGTGGCAGAGAAGGAG < 41bp 1 0.541290771590733 1 0.469016015529633 experiment 0.917418456818533 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956685 chrX:64956691 nonsynonymous SNV 0.986 0 27 hm5C_associated_SNPs_25907 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956691 64956691 1 + A G LIHC 64956695 + 64956675 64956715 41 GAAGAAGAAGCGTGAAATGGCAGAGAAGGAGAAAGAGAAGA GAAGAAGAAGCGTGAAGTGGCAGAGAAGGAGAAAGAGAAGA < 41bp 1 0.483975041360109 1 0.414414077997208 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956695 chrX:64956691 nonsynonymous SNV 0.986 0 17 hm5C_associated_SNPs_25908 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chr1 9776674 9776674 1 + C A LIHC 9776665 + 9776645 9776685 41 CTGTATGGCAGCTACCCGCTCTGCCAGTTCCAGGTGAGGCC CTGTATGGCAGCTACCCGCTCTGCCAGTTACAGGTGAGGCC < 41bp 1 0.325931789279865 1 0.192120343446732 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9776665 chr1:9776674 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_25909 0 0 3 PRPF8 POSTAR2 ENCODE chr1:9776667-9776716
64251 chr1 36358852 36358852 1 + T A LIHC 36358839 + 36358819 36358859 41 CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCATG CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGAGGCCATG < 41bp 1 0.279963459609526 1 0.486344456672668 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36358839 chr1:36358852 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_25910 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:36358821-36358859
64251 chr1 41475858 41475858 1 + A G LIHC 41475860 + 41475840 41475880 41 TATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAAT TATAGTGACAGGAGTGGAGGCAGCTCCCCTGACTCTGAAAT < 41bp 1 0.28088600128454 1 0.778949379920959 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41475860 chr1:41475858 nonsynonymous SNV 0.998 1 19 hm5C_associated_SNPs_25911 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41475827-41475909
64251 chr1 45218873 45218873 1 + A G LIHC 45218862 + 45218842 45218882 41 ATACCATTGAGGATGGTCAGCGAGGAGATGGAAGAGCAAGT ATACCATTGAGGATGGTCAGCGAGGAGATGGGAGAGCAAGT < 41bp 1 0.587934426465108 1 0.473000258207321 experiment 0.824131147069784 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218862 chr1:45218873 nonsynonymous SNV 0.959 0 32 hm5C_associated_SNPs_25912 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:45218846-45218875
64251 chr1 109325274 109325274 1 + A G LIHC 109325284 + 109325264 109325304 41 TTGACAGGGAAATTCCCAAGCTTATGAAAGAAATTTCATCA TTGACAGGGAGATTCCCAAGCTTATGAAAGAAATTTCATCA < 41bp 1 0.2177090967753 1 0.0682648420333862 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109325284 chr1:109325274 synonymous SNV . 0 11 hm5C_associated_SNPs_25913 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221659 chr1:109325260-109325280
64251 chr1 162492326 162492326 1 + C A LIHC 162492320 + 162492300 162492340 41 GTGCCTACAAGAGGGGATATCTGTATCAAACCTTGCTTTAA GTGCCTACAAGAGGGGATATCTGTATAAAACCTTGCTTTAA < 41bp 1 0.718410270267985 1 0.774581015110016 experiment 0.563179459464031 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162492320 chr1:162492326 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_25914 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:162492273-162492374
64251 chr3 49713561 49713561 1 + A G LIHC 49713571 + 49713551 49713591 41 AAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTT AAGCGCCCCAGGGCCGAGTCCTTCTTTCAGACCAAAGCCTT < 41bp 1 0.217905834986725 1 0.104798704385757 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49713571 chr3:49713561 nonsynonymous SNV 0.985 3 11 hm5C_associated_SNPs_25915 0 0 6 FXR2 POSTAR2 ENCODE chr3:49713520-49713590
64251 chr3 128973914 128973914 1 + T C LIHC 128973917 + 128973897 128973937 41 AGCTCTGCCCTCGTGTCTTCCTTGGTGTGTAGTTGCTGCTG AGCTCTGCCCTCGTGTCCTCCTTGGTGTGTAGTTGCTGCTG < 41bp 1 0.592855077115595 1 0.730689704418182 experiment 0.814289845768809 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973917 chr3:128973914 synonymous SNV . 0 18 hm5C_associated_SNPs_25916 0 0 2 DDX24 POSTAR2 ENCODE chr3:128973901-128973914
64251 chr4 123145715 123145715 1 + G T LIHC 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTCTCCAGCTTAGAGCACACGCTATGTTCTCAGCAGAAGG < 41bp 1 0.360523167038207 1 0.258279144763947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145715 synonymous SNV . 0 12 hm5C_associated_SNPs_25917 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chr4 183601728 183601728 1 + C A LIHC 183601733 + 183601713 183601753 41 TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTG TGTAGTGGCAACGGGAAGTACTCCAAGGGCCGCTGCCTGTG < 41bp 1 0.799312431320405 1 0.986724078655243 experiment 0.40137513735919 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183601733 chr4:183601728 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_25918 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:183601709-183601739
64251 chr10 75529157 75529157 1 + A G LIHC 75529138 + 75529118 75529158 41 ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAAT ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAGT < 41bp 1 0.403078746296862 1 0.243377774953842 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529138 chr10:75529157 nonsynonymous SNV 0.996 4 40 hm5C_associated_SNPs_25920 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529139-75529161
64251 chr10 75529157 75529157 1 + A G LIHC 75529146 + 75529126 75529166 41 TGTGCAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCT TGTGCAGGGCAGCGTCGGCTCCGCATCCATAGTCTGGCCCT < 41bp 1 0.776291981736156 1 0.0974757671356201 experiment 0.447416036527688 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529146 chr10:75529157 nonsynonymous SNV 0.996 4 32 hm5C_associated_SNPs_25921 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529139-75529161
64251 chr10 102716232 102716232 1 + G T LIHC 102716213 + 102716193 102716233 41 ATTTGTTTTGCACAGAAACACTTTGTGCTACTCTGTGGGGC ATTTGTTTTGCACAGAAACACTTTGTGCTACTCTGTGGGTC < 41bp 1 0.139430021428751 1 0.0764674246311188 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102716213 chr10:102716232 nonsynonymous SNV 0.998 0 40 hm5C_associated_SNPs_25922 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:102716219-102716243
64251 chr11 46403627 46403627 1 + T C LIHC 46403637 + 46403617 46403657 41 CGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCT CGAGGCTTCCCCCTCCTCACCCTCCTCGCCCTGCTGGCGCT < 41bp 1 0.0514727734245728 1 0.0521614849567413 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403637 chr11:46403627 nonsynonymous SNV 0.887 2 11 hm5C_associated_SNPs_25923 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403627 46403627 1 + T C LIHC 46403638 + 46403618 46403658 41 GAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTC GAGGCTTCCCCCTCCTCACCCTCCTCGCCCTGCTGGCGCTC < 41bp 1 0.464849856435536 1 0.191708087921143 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403638 chr11:46403627 nonsynonymous SNV 0.887 2 10 hm5C_associated_SNPs_25924 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403627 46403627 1 + T C LIHC 46403643 + 46403623 46403663 41 TTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTC TTCCCCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTC < 41bp 1 0.57118240685141 1 0.529366910457611 experiment 0.85763518629718 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403643 chr11:46403627 nonsynonymous SNV 0.887 2 5 hm5C_associated_SNPs_25925 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr12 53412615 53412615 1 + T C LIHC 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGACGATGCGTATAGGGCGCCTCCAATTGACCGTTCCA < 41bp 1 0.402143771188876 1 0.097471684217453 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412615 nonsynonymous SNV 0.938 1 12 hm5C_associated_SNPs_25926 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr12 53412615 53412615 1 + T C LIHC 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGCGTATAGGGCGCCTCCAATTGACCGTTCCATC < 41bp 1 0.0520576527360308 1 0.078999251127243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412615 nonsynonymous SNV 0.938 1 10 hm5C_associated_SNPs_25927 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr13 61034596 61034596 1 + C T LIHC 61034613 + 61034593 61034633 41 CACCAAGGATGCTGCGATTACAGATGACTGATGGTCATATA CACTAAGGATGCTGCGATTACAGATGACTGATGGTCATATA < 41bp 1 0.682926527000704 1 0.663956642150879 experiment 0.634146945998592 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034613 chr13:61034596 nonsynonymous SNV 0.998 4 4 hm5C_associated_SNPs_25928 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:61034554-61034606
64251 chr20 42331148 42331148 1 + G A LIHC 42331133 + 42331113 42331153 41 CCTCCCTCCCTGGACAGGACCCTGATGCTTGGTGTGACCTG CCTCCCTCCCTGGACAGGACCCTGATGCTTGGTGTAACCTG < 41bp 1 0.173237305339105 1 0.07310551404953 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42331133 chr20:42331148 nonsynonymous SNV 0.998 2 36 hm5C_associated_SNPs_25929 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917662 chr20:42331132-42331156
64251 chr1 39776665 39776665 1 + A G LIHC 39776662 + 39776642 39776682 41 GGACAATGCATTAAGGATTGCAGAGCAAGAGGTAAGCCCTA GGACAATGCATTAAGGATTGCAGGGCAAGAGGTAAGCCCTA < 41bp 1 0.322229936099491 1 0.53981751203537 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39776662 chr1:39776665 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_25930 0 0 10 BUD13 POSTAR2 ENCODE chr1:39776652-39776672
64251 chr1 153745473 153745473 1 + A G LIHC 153745464 + 153745444 153745484 41 TCCACCAAGCCACCCAAGAGCCGGCGAAAAGCAGCTCTGTC TCCACCAAGCCACCCAAGAGCCGGCGAAAGGCAGCTCTGTC < 41bp 1 0.312539116767787 1 0.818607687950134 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153745464 chr1:153745473 synonymous SNV . 0 30 hm5C_associated_SNPs_25931 0 0 5 GRWD1 POSTAR2 ENCODE chr1:153745426-153745536
64251 chr2 32724731 32724731 1 + G T LIHC 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAGAATCTGTTACATTTTTAGTGCACC < 41bp 1 0.0380013303053385 1 0.15670645236969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724731 synonymous SNV . 0 22 hm5C_associated_SNPs_25932 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr2 109347341 109347341 1 + G T LIHC 109347326 + 109347306 109347346 41 GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGTGTAAG < 41bp 1 0.0650877269223486 1 0.11671257019043 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347326 chr2:109347341 nonsynonymous SNV 0.982 1 36 hm5C_associated_SNPs_25933 0 0 3 BUD13 POSTAR2 ENCODE chr2:109347297-109347344
64251 chr5 138994189 138994189 1 + C T LIHC 138994200 + 138994180 138994220 41 GGCAAGCTACAATAATGGGGCCAGTAAGTATTCAGATTAAT GGCAAGCTATAATAATGGGGCCAGTAAGTATTCAGATTAAT < 41bp 1 0.0567843860788243 1 0.0651293396949768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2D2 ENSG00000131508 CDS Human protein_coding chr5:138994200 chr5:138994189 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_25934 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:138994187-138994212
64251 chr6 116565131 116565131 1 + T C LIHC 116565147 + 116565127 116565167 41 TGGCTACTATCCAAATCCTCCACTGGTCTTATCAAGTGATG TGGCCACTATCCAAATCCTCCACTGGTCTTATCAAGTGATG < 41bp 1 0.199525447657167 1 0.0259374380111694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116565147 chr6:116565131 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_25935 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr6:116565120-116565140
64251 chr7 141341107 141341107 1 + C A LIHC 141341103 + 141341083 141341123 41 CACGGGACCTACAGAGAGACCTCCCAATGAACCAGAGGAGA CACGGGACCTACAGAGAGACCTCCAAATGAACCAGAGGAGA < 41bp 1 0.741745828952949 1 0.808171153068542 experiment 0.516508342094102 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141341103 chr7:141341107 synonymous SNV . 0 25 hm5C_associated_SNPs_25936 0 0 1 ZNF622 POSTAR2 ENCODE chr7:141341045-141341149
64251 chr10 129141983 129141983 1 + G A LIHC 129141964 + 129141944 129141984 41 TCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGT TCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAAT < 41bp 1 0.102229861672246 1 0.179188102483749 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141964 chr10:129141983 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_25937 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129141967 + 129141947 129141987 41 TTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCC TTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAATGCC < 41bp 1 0.44818529595263 1 0.576050937175751 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141967 chr10:129141983 nonsynonymous SNV 0.997 1 37 hm5C_associated_SNPs_25938 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129141980 + 129141960 129142000 41 CCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAA CCTGCAACTGGAGAATTTTTCAAATGCCAAGAGAGCCAAAA < 41bp 1 0.193915066625418 1 0.916551947593689 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141980 chr10:129141983 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_25939 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129141986 + 129141966 129142006 41 ACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTA ACTGGAGAATTTTTCAAATGCCAAGAGAGCCAAAATCCTTA < 41bp 1 0.0629816657355068 1 0.288446754217148 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141986 chr10:129141983 nonsynonymous SNV 0.997 1 18 hm5C_associated_SNPs_25940 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129141987 + 129141967 129142007 41 CTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAA CTGGAGAATTTTTCAAATGCCAAGAGAGCCAAAATCCTTAA < 41bp 1 0.520848847809832 1 0.327704846858978 experiment 0.958302304380336 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141987 chr10:129141983 nonsynonymous SNV 0.997 1 17 hm5C_associated_SNPs_25941 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129141995 + 129141975 129142015 41 TTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTAAG TTTTTCAAATGCCAAGAGAGCCAAAATCCTTAACAAGTAAG < 41bp 1 0.0800172782137109 1 0.280232131481171 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141995 chr10:129141983 nonsynonymous SNV 0.997 1 9 hm5C_associated_SNPs_25942 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129142002 + 129141982 129142022 41 AGTGCCAAGAGAGCCAAAATCCTTAACAAGTAAGTTCTCAT AATGCCAAGAGAGCCAAAATCCTTAACAAGTAAGTTCTCAT < 41bp 1 0.0627927312646508 1 0.373353034257889 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129142002 chr10:129141983 nonsynonymous SNV 0.997 1 2 hm5C_associated_SNPs_25943 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141983 129141983 1 + G A LIHC 129142003 + 129141983 129142023 41 GTGCCAAGAGAGCCAAAATCCTTAACAAGTAAGTTCTCATC ATGCCAAGAGAGCCAAAATCCTTAACAAGTAAGTTCTCATC < 41bp 1 0.212490824761914 1 0.382373303174973 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129142003 chr10:129141983 nonsynonymous SNV 0.997 1 1 hm5C_associated_SNPs_25944 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr12 124158173 124158173 1 + A G LIHC 124158178 + 124158158 124158198 41 TCAGAAGGTGTTGGAAGTGACAGTGAGGTGGAAGAGAGGTC TCAGAAGGTGTTGGAGGTGACAGTGAGGTGGAAGAGAGGTC < 41bp 1 0.388053733158726 1 0.404004871845245 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124158178 chr12:124158173 synonymous SNV . 0 16 hm5C_associated_SNPs_25949 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr12:124158167-124158216
64251 chr16 69279693 69279693 1 + C A LIHC 69279685 + 69279665 69279705 41 TCTCAAAATGTGCTTTGCTGCTAGAAACCTAAGCATGCCGG TCTCAAAATGTGCTTTGCTGCTAGAAACATAAGCATGCCGG < 41bp 1 0.756748541176502 1 0.721188187599182 experiment 0.486502917646995 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNTB2 ENSG00000168807 CDS Human protein_coding chr16:69279685 chr16:69279693 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_25950 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:69279669-69279698
64251 chr16 69279693 69279693 1 + C A LIHC 69279708 + 69279688 69279728 41 GAAACCTAAGCATGCCGGATCTGGAAAACAGGTGAGGTGTA GAAACATAAGCATGCCGGATCTGGAAAACAGGTGAGGTGTA < 41bp 1 0.701865262285378 1 0.707379579544067 experiment 0.596269475429245 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNTB2 ENSG00000168807 CDS Human protein_coding chr16:69279708 chr16:69279693 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_25951 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:69279669-69279698
64251 chr16 81077293 81077293 1 + A G LIHC 81077278 + 81077258 81077298 41 AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACAAGAAC AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACGAGAAC < 41bp 1 0.169572074716923 1 0.143246293067932 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077278 chr16:81077293 nonsynonymous SNV 0.027 1 36 hm5C_associated_SNPs_25952 0 0 7 FUS POSTAR2 SRX029328 chr16:81077269-81077295
64251 chr1 228333733 228333733 1 + C T LIHC 228333718 + 228333698 228333738 41 CCCCGATGGGTGACAGGTCTCTCTGCTAGATACCACGAGGA CCCCGATGGGTGACAGGTCTCTCTGCTAGATACCATGAGGA < 41bp 1 0.562659191790286 1 0.219828575849533 experiment 0.874681616419427 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333718 chr1:228333733 nonsynonymous SNV 0.363 3 36 hm5C_associated_SNPs_25954 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:228333720-228333740
64251 chr11 31392389 31392389 1 + C A LIHC 31392369 + 31392349 31392389 41 AGACCCATCTGCAAATATATCAGACCTAAAACAAAAATATC AGACCCATCTGCAAATATATCAGACCTAAAACAAAAATATA < 41bp 1 0.321291905297636 1 0.193133801221848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC24 ENSG00000170946 CDS Human protein_coding chr11:31392369 chr11:31392389 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_25956 0 0 7 EWSR1 POSTAR2 SRX029343 chr11:31392371-31392395
64251 chr15 57554327 57554327 1 + T C LIHC 57554318 + 57554298 57554338 41 ACTCATCGGGAAGACTCTGTCAGTCTCAATGGCAATCATTC ACTCATCGGGAAGACTCTGTCAGTCTCAACGGCAATCATTC < 41bp 1 0.252218237658883 1 0.605236947536469 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554318 chr15:57554327 synonymous SNV . 0 30 hm5C_associated_SNPs_25957 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554327 57554327 1 + T C LIHC 57554338 + 57554318 57554358 41 CAGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCA CAGTCTCAACGGCAATCATTCAGTCCTGTCTAGTACAGTCA < 41bp 1 0.155489351355314 1 0.117291778326035 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554338 chr15:57554327 synonymous SNV . 0 10 hm5C_associated_SNPs_25958 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554327 57554327 1 + T C LIHC 57554343 + 57554323 57554363 41 TCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCACTACT TCAACGGCAATCATTCAGTCCTGTCTAGTACAGTCACTACT < 41bp 1 0.0993121983132052 1 0.0359518826007843 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554343 chr15:57554327 synonymous SNV . 0 5 hm5C_associated_SNPs_25959 0 0 2 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 64410404 64410404 1 + A G LIHC 64410406 + 64410386 64410426 41 TTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC TTCTCTTCCTCCTCAGGAGGCCACAAATTCTTCGAAGCCCC < 41bp 1 0.197815688496779 1 0.20588406920433 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410406 chr15:64410404 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_25960 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:64410379-64410409
64251 chr15 64410404 64410404 1 + A G LIHC 64410409 + 64410389 64410429 41 TCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGC TCTTCCTCCTCAGGAGGCCACAAATTCTTCGAAGCCCCAGC < 41bp 1 0.188510839772759 1 0.36113315820694 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410409 chr15:64410404 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_25961 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:64410379-64410409
64251 chr17 66039299 66039299 1 + G T LIHC 66039310 + 66039290 66039330 41 TGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGC TGCTGTTGATCAGATTCTTCCTACCTTAGTTCGGCTCCTGC < 41bp 1 0.3450693845473 1 0.428644239902496 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039310 chr17:66039299 nonsynonymous SNV 0.970 0 10 hm5C_associated_SNPs_25962 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:66039280-66039300
64251 chr2 191523984 191523984 1 + G T LIHC 191523972 + 191523952 191523992 41 TATTACAAAAAGCCAATCTACTTTCTTATTTTGATGCCTTT TATTACAAAAAGCCAATCTACTTTCTTATTTTTATGCCTTT < 41bp 1 0.0763563679856185 1 0.0474811494350433 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191523972 chr2:191523984 nonsynonymous SNV 0.955 5 33 hm5C_associated_SNPs_25963 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:191523963-191523984
64251 chr8 17794743 17794743 1 + C A LIHC 17794729 + 17794709 17794749 41 GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC GAAAGTGATAAAAGAGTAACCAATGATATTTCTCAGGAGTC < 41bp 1 0.285449748535285 1 0.402147710323334 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17794729 chr8:17794743 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_25964 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:17794733-17794750
64251 chr11 62557369 62557369 1 + G T LIHC 62557360 + 62557340 62557380 41 TGTCCCTGTCTCCTACAGACCTCTTCTTGGGTGAATTTGGT TGTCCCTGTCTCCTACAGACCTCTTCTTGTGTGAATTTGGT < 41bp 1 0.0859658943694628 1 0.0444935858249664 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62557360 chr11:62557369 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_25965 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:62557317-62557423
64251 chr11 62557369 62557369 1 + G T LIHC 62557362 + 62557342 62557382 41 TCCCTGTCTCCTACAGACCTCTTCTTGGGTGAATTTGGTAT TCCCTGTCTCCTACAGACCTCTTCTTGTGTGAATTTGGTAT < 41bp 1 0.110019072082909 1 0.0729668438434601 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62557362 chr11:62557369 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_25966 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:62557317-62557423
64251 chr13 28752020 28752020 1 + C A LIHC 28752016 + 28751996 28752036 41 TTTCAGATCCTCTAACATCACCTGCTTCATCCTTGTTTAAT TTTCAGATCCTCTAACATCACCTGATTCATCCTTGTTTAAT < 41bp 1 0.356424275045759 1 0.0564401745796204 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752016 chr13:28752020 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_25967 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr13 28752020 28752020 1 + C A LIHC 28752017 + 28751997 28752037 41 TTCAGATCCTCTAACATCACCTGCTTCATCCTTGTTTAATG TTCAGATCCTCTAACATCACCTGATTCATCCTTGTTTAATG < 41bp 1 0.200698314613837 1 0.0555157065391541 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752017 chr13:28752020 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_25968 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr13 28752020 28752020 1 + C A LIHC 28752023 + 28752003 28752043 41 TCCTCTAACATCACCTGCTTCATCCTTGTTTAATGACTTTG TCCTCTAACATCACCTGATTCATCCTTGTTTAATGACTTTG < 41bp 1 0.13681297163222 1 0.0913402736186981 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752023 chr13:28752020 nonsynonymous SNV 1.000 0 18 hm5C_associated_SNPs_25969 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr13 28752020 28752020 1 + C A LIHC 28752026 + 28752006 28752046 41 TCTAACATCACCTGCTTCATCCTTGTTTAATGACTTTGGTG TCTAACATCACCTGATTCATCCTTGTTTAATGACTTTGGTG < 41bp 1 0.0977034898953551 1 0.109019011259079 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752026 chr13:28752020 nonsynonymous SNV 1.000 0 15 hm5C_associated_SNPs_25970 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr13 28752020 28752020 1 + C A LIHC 28752027 + 28752007 28752047 41 CTAACATCACCTGCTTCATCCTTGTTTAATGACTTTGGTGC CTAACATCACCTGATTCATCCTTGTTTAATGACTTTGGTGC < 41bp 1 0.170483100805132 1 0.0606861710548401 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752027 chr13:28752020 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_25971 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:28752001-28752027
64251 chr16 28845485 28845485 1 + C A LIHC 28845478 + 28845458 28845498 41 GCAGGCCAGAGTGGGCTATACAGCCCCCAGTACATCTCCTA GCAGGCCAGAGTGGGCTATACAGCCCCAAGTACATCTCCTA < 41bp 1 0.442953514002533 1 0.226183831691742 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845478 chr16:28845485 nonsynonymous SNV 0.998 2 28 hm5C_associated_SNPs_25972 0 0 17 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:28845385-28845515
64251 chr2 32668600 32668600 1 + T C LIHC 32668612 + 32668592 32668632 41 TGGACCTGTTCTGTTGAAGGCTTTACTTGATAATATGTCAT TGGACCTGCTCTGTTGAAGGCTTTACTTGATAATATGTCAT < 41bp 1 0.0413865403683321 1 0.0878930985927582 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32668612 chr2:32668600 nonsynonymous SNV 0.997 1 9 hm5C_associated_SNPs_25974 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32668566-32668627
64251 chr3 9976551 9976551 1 + A G LIHC 9976545 + 9976525 9976565 41 GAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGC GAGAGAACCATCCGGGACAACTTTGGGGGTGGAAACACTGC < 41bp 1 0.114312620549392 1 0.163980185985565 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9976545 chr3:9976551 synonymous SNV . 0 27 hm5C_associated_SNPs_25975 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:9976540-9976564
64251 chr3 183369018 183369018 1 + C A LIHC 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATGAAGCAAGACGGTACAACATACTTGGGAATGAAATGAT < 41bp 1 0.123688764317323 1 0.125989437103271 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369018 nonsynonymous SNV 0.999 4 19 hm5C_associated_SNPs_25976 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr3:183369014-183369033
64251 chr10 3176697 3176697 1 + A G LIHC 3176685 + 3176665 3176705 41 CCACCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACT CCACCAACAGGGTGGGGCACCCTCTCCATTTGGTAGAAACT < 41bp 1 0.0105231122241109 1 0.0442876219749451 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176685 chr10:3176697 nonsynonymous SNV 0.660 5 33 hm5C_associated_SNPs_25979 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr10 3176697 3176697 1 + A G LIHC 3176688 + 3176668 3176708 41 CCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG CCAACAGGGTGGGGCACCCTCTCCATTTGGTAGAAACTTTG < 41bp 1 0.728909745316767 1 0.943609178066254 experiment 0.542180509366467 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176688 chr10:3176697 nonsynonymous SNV 0.660 5 30 hm5C_associated_SNPs_25980 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr11 75110602 75110602 1 + A G LIHC 75110585 + 75110565 75110605 41 TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCAAAT TTCCTTTCAGCGGAGCGCGGCGGCAAGATGGCAGTGCGAAT < 41bp 1 0.656830924213632 1 0.513213753700256 experiment 0.686338151572737 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 CDS Human protein_coding chr11:75110585 chr11:75110602 nonsynonymous SNV 0.982 1 38 hm5C_associated_SNPs_25981 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:75110567-75110612
64251 chr11 120280137 120280137 1 + G T LIHC 120280127 + 120280107 120280147 41 CTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGAT CTCCTCCAAGAAGACAAAGTCTAGTTCAGATGAGAGTAGAT < 41bp 1 0.173841247179326 1 0.446900129318237 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120280127 chr11:120280137 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_25982 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:120280114-120280166
64251 chr12 112460309 112460309 1 + G T LIHC 112460318 + 112460298 112460338 41 TTAGACCAAGGGGAGGACTTCCCAGCATCAGAGATGACACG TTAGACCAAGGTGAGGACTTCCCAGCATCAGAGATGACACG < 41bp 1 0.211633720174559 1 0.398422598838806 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460318 chr12:112460309 synonymous SNV . 0 12 hm5C_associated_SNPs_25984 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr12:112460224-112460364
64251 chr12 112460309 112460309 1 + G T LIHC 112460323 + 112460303 112460343 41 CCAAGGGGAGGACTTCCCAGCATCAGAGATGACACGGATCG CCAAGGTGAGGACTTCCCAGCATCAGAGATGACACGGATCG < 41bp 1 0.511904689191089 1 0.138351857662201 experiment 0.976190621617821 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460323 chr12:112460309 synonymous SNV . 0 7 hm5C_associated_SNPs_25985 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr12:112460224-112460364
64251 chr18 55996245 55996245 1 + G T LIHC 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTCCTCGGAGTCTGACAATAACATCAGACAGATCAA < 41bp 1 0.36782580924387 1 0.483042448759079 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996245 synonymous SNV . 0 18 hm5C_associated_SNPs_25986 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr19 46202122 46202122 1 + C T LIHC 46202126 + 46202106 46202146 41 CTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGC CTACAGCCACTTCCCTTGCACGGTCCGCTGGTTCCATCGGC < 41bp 1 0.162553437320532 1 0.687031030654907 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46202126 chr19:46202122 nonsynonymous SNV 0.140 2 17 hm5C_associated_SNPs_25987 0 0 1 SND1 POSTAR2 ENCODE chr19:46202079-46202138
64251 chr4 39747379 39747379 1 + A T LIHC 39747383 + 39747363 39747403 41 TTTTTTTAGGAGGAAGATACCAACTAGAGATAAAAATACCA TTTTTTTAGGAGGAAGTTACCAACTAGAGATAAAAATACCA < 41bp 1 0.385332114161196 1 0.643512308597565 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2K ENSG00000078140 CDS Human protein_coding chr4:39747383 chr4:39747379 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_25990 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr4:39747358-39747379
64251 chr17 1733407 1733407 1 + A G LIHC 1733413 + 1733393 1733433 41 CGGCCAACTGAGCGAGGGGGCCATTGCGGTGAGGAGGTGCC CGGCCAACTGAGCGGGGGGGCCATTGCGGTGAGGAGGTGCC < 41bp 1 0.123906440870855 1 0.279147386550903 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1733413 chr17:1733407 nonsynonymous SNV 0.997 2 15 hm5C_associated_SNPs_25991 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:1733368-1733409
64251 chr1 112305374 112305374 1 + A G LIHC 112305377 + 112305357 112305397 41 TGGATTGGGAGACATACATGCATCGGATTGGGAGAGCTGGC TGGATTGGGAGACATACGTGCATCGGATTGGGAGAGCTGGC < 41bp 1 0.382861008611311 1 0.116467028856277 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305377 chr1:112305374 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_25992 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:112305319-112305375
64251 chr1 220960447 220960447 1 + A G LIHC 220960430 + 220960410 220960450 41 CGCGCATGGCCCACGCGGCGCCGGCGGCTGCTGCAGCAGGT CGCGCATGGCCCACGCGGCGCCGGCGGCTGCTGCAGCGGGT < 41bp 1 0.579916341489158 1 0.406368345022202 experiment 0.840167317021683 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220960430 chr1:220960447 nonsynonymous SNV 0.988 0 38 hm5C_associated_SNPs_25993 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:220960432-220960458
64251 chr9 125772702 125772702 1 + G C LIHC 125772700 + 125772680 125772720 41 TGTATGCTTGGAAAGTGAATCAGAAAGAGAGAGGAGGAAAA TGTATGCTTGGAAAGTGAATCACAAAGAGAGAGGAGGAAAA < 41bp 1 0.564101898657365 1 0.295960932970047 experiment 0.87179620268527 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125772700 chr9:125772702 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_25994 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:125772672-125772703
64251 chr10 17278320 17278320 1 + T C LIHC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCCCTCTGGCTGATACCCACTCAAAA < 41bp 1 0.223275602314951 1 0.597391605377197 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278320 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_25995 0 0 40 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr14 75190045 75190045 1 + A C LIHC 75190025 + 75190005 75190045 41 CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTA CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTC < 41bp 1 0.748378597740862 1 0.239390701055527 experiment 0.503242804518277 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCF1 ENSG00000119616 CDS Human protein_coding chr14:75190025 chr14:75190045 synonymous SNV . 0 41 hm5C_associated_SNPs_25999 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:75190027-75190045
64251 chr7 30673470 30673470 1 + G T LIHC 30673480 + 30673460 30673500 41 AGACAATCGAGGAATGAGGACAATTTTGACAACTTTTGACC AGACAATCGATGAATGAGGACAATTTTGACAACTTTTGACC < 41bp 1 0.162005583200922 1 0.0487353503704071 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30673480 chr7:30673470 nonsynonymous SNV 0.967 1 11 hm5C_associated_SNPs_26002 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30673469-30673497
64251 chr17 70119055 70119055 1 + C T LIHC 70119073 + 70119053 70119093 41 GCCGACTCGCCACACTCCTCCTCCGGCATGAGCGAGGTGCA GCTGACTCGCCACACTCCTCCTCCGGCATGAGCGAGGTGCA < 41bp 1 0.663809065037093 1 0.798397421836853 experiment 0.672381869925815 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119073 chr17:70119055 synonymous SNV . 0 3 hm5C_associated_SNPs_26003 0 0 2 GRWD1 POSTAR2 ENCODE chr17:70119033-70119063
64251 chr17 39975544 39975544 1 + A G LIHC 39975559 + 39975539 39975579 41 CAGCTAGAGACGCTGGAGCTCCCCCCCGGCTGTGTCCGCAG CAGCTGGAGACGCTGGAGCTCCCCCCCGGCTGTGTCCGCAG < 41bp 1 0.211529631720767 1 0.224257677793503 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39975559 chr17:39975544 synonymous SNV . 0 6 hm5C_associated_SNPs_26004 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:39975508-39975545
64251 chr2 11300640 11300640 1 + G C LIHC 11300656 + 11300636 11300676 41 CGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT CGCTCACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT < 41bp 1 0.162712788654952 1 0.219079583883286 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300656 chr2:11300640 synonymous SNV . 0 5 hm5C_associated_SNPs_26005 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:11300618-11300659
64251 chr10 17271663 17271663 1 + A T LIHC 17271653 + 17271633 17271673 41 GGAGCAGCGTGCCCGGGGTGCGGCTCCTGCAGGACTCGGTG GGAGCAGCGTGCCCGGGGTGCGGCTCCTGCTGGACTCGGTG < 41bp 1 0.585462514589563 1 0.450326412916183 experiment 0.829074970820874 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271653 chr10:17271663 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_26007 0 0 37 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr10:17271620-17271689
64251 chr10 17271663 17271663 1 + A T LIHC 17271656 + 17271636 17271676 41 GCAGCGTGCCCGGGGTGCGGCTCCTGCAGGACTCGGTGGAC GCAGCGTGCCCGGGGTGCGGCTCCTGCTGGACTCGGTGGAC < 41bp 1 0.694948066949469 1 0.709021091461182 experiment 0.610103866101061 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271656 chr10:17271663 nonsynonymous SNV 0.998 1 28 hm5C_associated_SNPs_26008 0 0 37 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr10:17271620-17271689
64251 chr10 17271663 17271663 1 + A T LIHC 17271658 + 17271638 17271678 41 AGCGTGCCCGGGGTGCGGCTCCTGCAGGACTCGGTGGACTT AGCGTGCCCGGGGTGCGGCTCCTGCTGGACTCGGTGGACTT < 41bp 1 0.264552511597895 1 0.14065283536911 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271658 chr10:17271663 nonsynonymous SNV 0.998 1 26 hm5C_associated_SNPs_26009 0 0 37 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr10:17271620-17271689
64251 chr10 17271663 17271663 1 + A T LIHC 17271683 + 17271663 17271703 41 AGGACTCGGTGGACTTCTCGCTGGCCGACGCCATCAACACC TGGACTCGGTGGACTTCTCGCTGGCCGACGCCATCAACACC < 41bp 1 0.751510257868854 1 0.395365089178085 experiment 0.496979484262293 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271683 chr10:17271663 nonsynonymous SNV 0.998 1 1 hm5C_associated_SNPs_26010 0 0 37 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr10:17271620-17271689
64251 chr14 64914955 64914955 1 + A G LIHC 64914938 + 64914918 64914958 41 CACTGTTGTTTTTACAGAACCTGGAGCTGGTTGAAAAAGGC CACTGTTGTTTTTACAGAACCTGGAGCTGGTTGAAAAGGGC < 41bp 1 0.560747553498434 1 0.536152720451355 experiment 0.878504893003133 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64914938 chr14:64914955 synonymous SNV . 0 38 hm5C_associated_SNPs_26012 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64914952-64914986
64251 chr5 156816275 156816275 1 + C T LIHC 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCTTGAC < 41bp 1 0.265392552219698 1 0.395585149526596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816275 synonymous SNV . 0 37 hm5C_associated_SNPs_26013 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr10 75551817 75551817 1 + G T LIHC 75551836 + 75551816 75551856 41 TGCTGGGCCCGGGCCCTGCCCTCTCGGCCAGGTGCCTCCCG TTCTGGGCCCGGGCCCTGCCCTCTCGGCCAGGTGCCTCCCG < 41bp 1 0.397237204076561 1 0.19927716255188 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551836 chr10:75551817 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_26014 0 0 6 DDX42 POSTAR2 ENCODE chr10:75551810-75551872
64251 chr2 120005515 120005515 1 + C A LIHC 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTGCCAGTGTCCGTGGTCAAC < 41bp 1 0.332931659632241 1 0.0264078378677368 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005515 synonymous SNV . 0 26 hm5C_associated_SNPs_26029 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr10 75532078 75532078 1 + C T LIHC 75532074 + 75532054 75532094 41 CGGTGCTGGCCGAGGGGGCGCCGGCTGCCGGAGTGGACATG CGGTGCTGGCCGAGGGGGCGCCGGTTGCCGGAGTGGACATG < 41bp 1 0.576011848191717 1 0.254964590072632 experiment 0.847976303616566 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUT11 ENSG00000267964 CDS Human other chr10:75532074 chr10:75532078 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_26030 0 0 3 SSB POSTAR2 GSE95683,GSM2521600 chr10:75532071-75532091
64251 chr10 75532078 75532078 1 + C T LIHC 75532075 + 75532055 75532095 41 GGTGCTGGCCGAGGGGGCGCCGGCTGCCGGAGTGGACATGG GGTGCTGGCCGAGGGGGCGCCGGTTGCCGGAGTGGACATGG < 41bp 1 0.669933057022709 1 0.416467994451523 experiment 0.660133885954582 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FUT11 ENSG00000267964 CDS Human other chr10:75532075 chr10:75532078 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_26031 0 0 3 SSB POSTAR2 GSE95683,GSM2521600 chr10:75532071-75532091
64251 chr6 160494391 160494391 1 + G A LIHC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCATGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT < 41bp 1 0.32778202009216 1 0.871079325675964 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494391 nonsynonymous SNV 0.998 4 4 hm5C_associated_SNPs_26032 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:160494354-160494400
64251 chr7 2406209 2406209 1 + A C LIHC 2406225 + 2406205 2406245 41 GCTTAGCATCTATGAAACTCCTGTAAGTGGCCTCAGTGATG GCTTCGCATCTATGAAACTCCTGTAAGTGGCCTCAGTGATG < 41bp 1 0.473738594234687 1 0.0882507562637329 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2406225 chr7:2406209 nonsynonymous SNV 0.997 4 5 hm5C_associated_SNPs_26033 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2406165-2406212
64251 chr11 58347078 58347078 1 + G A LIHC 58347094 + 58347074 58347114 41 GCAAGAAGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG GCAAAAAGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG < 41bp 1 0.697695365015781 1 0.145689100027084 experiment 0.604609269968438 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58347094 chr11:58347078 synonymous SNV . 0 5 hm5C_associated_SNPs_26046 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:58347055-58347093
64251 chr5 53815382 53815382 1 + G T LIHC 53815367 + 53815347 53815387 41 TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGTACATC < 41bp 1 0.340657556242346 1 0.383301049470901 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815367 chr5:53815382 nonsynonymous SNV 0.994 4 36 hm5C_associated_SNPs_26048 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:53815346-53815390
64251 chr10 102763425 102763425 1 + C T LIHC 102763411 + 102763391 102763431 41 TGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCT TGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCTTCCTCT < 41bp 1 0.0470255735758657 1 0.0866979360580444 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763411 chr10:102763425 synonymous SNV . 0 35 hm5C_associated_SNPs_26052 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102763409-102763452
64251 chr10 102763425 102763425 1 + C T LIHC 102763412 + 102763392 102763432 41 GACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCTT GACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCTTCCTCTT < 41bp 1 0.357008765608713 1 0.219184249639511 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763412 chr10:102763425 synonymous SNV . 0 34 hm5C_associated_SNPs_26053 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102763409-102763452
64251 chr15 90159653 90159653 1 + A T LIHC 90159641 + 90159621 90159661 41 GTGTTTACATTTTAGGTTATCACAAACTGCTGACTAAGAGT GTGTTTACATTTTAGGTTATCACAAACTGCTGTCTAAGAGT < 41bp 1 0.35266602582061 1 0.320526361465454 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90159641 chr15:90159653 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_26054 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:90159636-90159658
64251 chr15 90159653 90159653 1 + A T LIHC 90159672 + 90159652 90159692 41 GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCT GTCTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCT < 41bp 1 0.777870054659728 1 0.866289734840393 experiment 0.444259890680544 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90159672 chr15:90159653 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_26055 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:90159636-90159658
64251 chr1 161132173 161132173 1 + C T LIHC 161132159 + 161132139 161132179 41 AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTCACTGAA AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTTACTGAA < 41bp 1 0.434241509998672 1 0.739577114582062 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161132159 chr1:161132173 synonymous SNV . 0 35 hm5C_associated_SNPs_26056 0 0 5 DDX24 POSTAR2 ENCODE chr1:161132163-161132179
64251 chrX 135106598 135106598 1 + A G LIHC 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTGTTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT < 41bp 1 0.314828596216016 1 0.539479494094849 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106598 synonymous SNV . 0 6 hm5C_associated_SNPs_26065 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:135106590-135106609
64251 chr1 201837827 201837827 1 + T C LIHC 201837817 + 201837797 201837837 41 CTCAGGACATCTTCAAGGAGCTGTCCCAGATTGAAGCCTGT CTCAGGACATCTTCAAGGAGCTGTCCCAGACTGAAGCCTGT < 41bp 1 0.0403156426756033 1 0.0650431513786316 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IPO9 ENSG00000198700 CDS Human protein_coding chr1:201837817 chr1:201837827 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_26066 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:201837764-201837892
64251 chr19 39664257 39664257 1 + G T LIHC 39664261 + 39664241 39664281 41 ACGGGCCATCAGCGGGGGGCCTGGCCATCCCCCAGTCCTCC ACGGGCCATCAGCGGGTGGCCTGGCCATCCCCCAGTCCTCC < 41bp 1 0.588549507674823 1 0.0352093875408173 experiment 0.822900984650355 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK4 ENSG00000130669 CDS Human protein_coding chr19:39664261 chr19:39664257 synonymous SNV . 0 17 hm5C_associated_SNPs_26076 0 0 1 SF3B4 POSTAR2 ENCODE chr19:39664138-39664263
64251 chr3 158519925 158519925 1 + C G LIHC 158519940 + 158519920 158519960 41 CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG CTCTCGGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG < 41bp 1 0.499964693390045 1 0.445691615343094 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519940 chr3:158519925 nonsynonymous SNV 0.000 0 6 hm5C_associated_SNPs_26077 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr22 39125539 39125539 1 + G T LIHC 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCGACGAAAAAGTGCCCCCTGACGAAACGAGACGA < 41bp 1 0.0560374966990693 1 0.143999516963959 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125539 nonsynonymous SNV 0.910 2 19 hm5C_associated_SNPs_26079 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125539 39125539 1 + G T LIHC 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCGACGAAAAAGTGCCCCCTGACGAAACGAGACGAG < 41bp 1 0.0816328330150366 1 0.256633400917053 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125539 nonsynonymous SNV 0.910 2 18 hm5C_associated_SNPs_26080 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125539 39125539 1 + G T LIHC 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTCGACGAAAAAGTGCCCCCTGACGAAACGAGACGAGG < 41bp 1 0.0382660264635795 1 0.213740795850754 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125539 nonsynonymous SNV 0.910 2 17 hm5C_associated_SNPs_26081 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125539 39125539 1 + G T LIHC 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCGACGAAAAAGTGCCCCCTGACGAAACGAGACGAGGG < 41bp 1 0.0839073347914798 1 0.218907356262207 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125539 nonsynonymous SNV 0.910 2 16 hm5C_associated_SNPs_26082 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125539 39125539 1 + G T LIHC 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCGACGAAAAAGTGCCCCCTGACGAAACGAGACGAGGGG < 41bp 1 0.162936218061795 1 0.370034247636795 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125539 nonsynonymous SNV 0.910 2 15 hm5C_associated_SNPs_26083 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr12 57910031 57910031 1 + A C LIHC 57910022 + 57910002 57910042 41 CTGGTGATAACTTTGTTGTTCTCCAGGCAAAAACGTCCCCG CTGGTGATAACTTTGTTGTTCTCCAGGCACAAACGTCCCCG < 41bp 1 0.450144915141568 1 0.819933533668518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57910022 chr12:57910031 nonsynonymous SNV 0.006 1 30 hm5C_associated_SNPs_26086 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57909944-57910034
64251 chr17 79663472 79663472 1 + G T LIHC 79663489 + 79663469 79663509 41 GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC GGATAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC < 41bp 1 0.65933827780395 1 0.759946823120117 experiment 0.681323444392101 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663489 chr17:79663472 nonsynonymous SNV 0.994 0 4 hm5C_associated_SNPs_26087 0 0 6 DDX24 POSTAR2 ENCODE chr17:79663407-79663529
64251 chr16 29848051 29848051 1 + G C LIHC 29848064 + 29848044 29848084 41 CAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC CAGCCCTCCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC < 41bp 1 0.635696644833211 1 0.594521522521973 experiment 0.728606710333579 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29848064 chr16:29848051 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_26089 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chr6 28333341 28333341 1 + G A LIHC 28333342 + 28333322 28333362 41 GAAGCTGGTGAACAGGAGGGCAGGCTACAAAGAAAGCAGAA GAAGCTGGTGAACAGGAGGACAGGCTACAAAGAAAGCAGAA < 41bp 1 0.541914441394287 1 0.494701981544495 experiment 0.916171117211427 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333342 chr6:28333341 nonsynonymous SNV 0.969 0 20 hm5C_associated_SNPs_26090 0 0 1 PPIG POSTAR2 ENCODE chr6:28333211-28333384
64251 chr16 88781068 88781068 1 + G C LIHC 88781052 + 88781032 88781072 41 TCTCTCCCAGATGCAGTCACCCATCCCCCTGACTGAGACCC TCTCTCCCAGATGCAGTCACCCATCCCCCTGACTGACACCC < 41bp 1 0.0502080218790004 1 0.163143306970596 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781052 chr16:88781068 nonsynonymous SNV 0.010 0 37 hm5C_associated_SNPs_26091 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88781042-88781068
64251 chr1 198233311 198233311 1 + A G LIHC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTCATTGAAGATAATGAGCTAAA < 41bp 1 0.127214616039028 1 0.380498349666595 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233311 synonymous SNV . 0 36 hm5C_associated_SNPs_26094 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:198233293-198233349
64251 chr3 43389366 43389366 1 + A G LIHC 43389379 + 43389359 43389399 41 CAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAA CAGCTGCGGTAGTTCGGAGACCAGTGATGATGATTCTGAAA < 41bp 1 0.364408869519359 1 0.200572401285172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRK ENSG00000163788 CDS Human protein_coding chr3:43389379 chr3:43389366 nonsynonymous SNV 0.994 4 8 hm5C_associated_SNPs_26095 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:43389341-43389367
64251 chr5 7878172 7878172 1 + G T LIHC 7878185 + 7878165 7878205 41 ATCACCTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGC ATCACCTTCATCCTCGAGGACAGACCTTGTGAAGTCAGAGC < 41bp 1 0.277367757283214 1 0.199733436107635 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878185 chr5:7878172 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_26096 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:7878144-7878187
64251 chr5 7878172 7878172 1 + G T LIHC 7878190 + 7878170 7878210 41 CTGCATCCTCGAGGACAGACCTTGTGAAGTCAGAGCTGCTA CTTCATCCTCGAGGACAGACCTTGTGAAGTCAGAGCTGCTA < 41bp 1 0.57575349002156 1 0.0476958155632019 experiment 0.84849301995688 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7878190 chr5:7878172 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_26097 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:7878144-7878187
64251 chr7 4794986 4794986 1 + A G LIHC 4795002 + 4794982 4795022 41 CCCTACTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC CCCTGCTACCGGACGGCCGACAAAGGCTGGCAGGTGAAGCC < 41bp 1 0.243725950431459 1 0.601761817932129 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4795002 chr7:4794986 nonsynonymous SNV 0.978 5 5 hm5C_associated_SNPs_26098 0 0 19 NOP58 POSTAR2 GSE43666,GSM1067862 chr7:4794961-4794992
64251 chr7 27833956 27833956 1 + T C LIHC 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAACGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA < 41bp 1 0.721844464669063 1 0.672766864299774 experiment 0.556311070661873 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833956 synonymous SNV . 0 4 hm5C_associated_SNPs_26099 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833940-27833960
64251 chr11 61404704 61404704 1 + T A LIHC 61404702 + 61404682 61404722 41 GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGC GCTCAACATCTCCCCCTTCTCCACTGGGCTGGTCATCCAGC < 41bp 1 0.343002838103539 1 0.295108258724213 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404702 chr11:61404704 . . 0 23 hm5C_associated_SNPs_26102 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr12 120875944 120875944 1 + T C LIHC 120875925 + 120875905 120875945 41 GGCGCTGCGGCAGTCCAGATCAAAAATGGCGGTAGTTGGTG GGCGCTGCGGCAGTCCAGATCAAAAATGGCGGTAGTTGGCG < 41bp 1 0.702349917588103 1 0.290809988975525 experiment 0.595300164823795 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120875925 chr12:120875944 synonymous SNV . 0 40 hm5C_associated_SNPs_26103 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:120875920-120875960
64251 chr19 757065 757065 1 + C T LIHC 757057 + 757037 757077 41 TACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGG TACCATCTGGTGTGCATGGGCCCCGAGGTCAGCGGCTGGGG < 41bp 1 0.336540079606512 1 0.0637609660625458 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757057 chr19:757065 nonsynonymous SNV 0.035 1 29 hm5C_associated_SNPs_26105 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757065 757065 1 + C T LIHC 757058 + 757038 757078 41 ACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGC ACCATCTGGTGTGCATGGGCCCCGAGGTCAGCGGCTGGGGC < 41bp 1 0.572170467453396 1 0.258354812860489 experiment 0.855659065093209 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757058 chr19:757065 nonsynonymous SNV 0.035 1 28 hm5C_associated_SNPs_26106 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757065 757065 1 + C T LIHC 757059 + 757039 757079 41 CCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCC CCATCTGGTGTGCATGGGCCCCGAGGTCAGCGGCTGGGGCC < 41bp 1 0.498960536863632 1 0.294692754745483 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757059 chr19:757065 nonsynonymous SNV 0.035 1 27 hm5C_associated_SNPs_26107 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757065 757065 1 + C T LIHC 757060 + 757040 757080 41 CATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCA CATCTGGTGTGCATGGGCCCCGAGGTCAGCGGCTGGGGCCA < 41bp 1 0.773615925938434 1 0.770804345607758 experiment 0.452768148123132 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757060 chr19:757065 nonsynonymous SNV 0.035 1 26 hm5C_associated_SNPs_26108 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 33167237 33167237 1 + T A LIHC 33167256 + 33167236 33167276 41 CTGGTGCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCT CAGGTGCTGACCGTCGGTGGCTCGGCGGACTCGCAGAACCT < 41bp 1 0.659306174302738 1 0.494039058685303 experiment 0.681387651394524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167256 chr19:33167237 nonsynonymous SNV 0.933 1 2 hm5C_associated_SNPs_26109 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr22 32881139 32881139 1 + G C LIHC 32881149 + 32881129 32881169 41 TCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGC TCCTCTCTGCCAGGGCAGCTCCGCTACTCTCACCTGTGTGC < 41bp 1 0.437596506743188 1 0.113410949707031 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881149 chr22:32881139 nonsynonymous SNV 0.969 2 11 hm5C_associated_SNPs_26110 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr16 67006828 67006828 1 + C A LIHC 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCAA < 41bp 1 0.289148187388051 1 0.315994024276733 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006828 nonsynonymous SNV 0.000 1 40 hm5C_associated_SNPs_26111 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr17 38610236 38610236 1 + A G LUAD 38610248 + 38610228 38610268 41 GCCGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT GCCGCTTCGCAGAGCCGCACCCACGAGGACCTCTACATCAT < 41bp 1 0.384813048704127 1 0.0996502935886383 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610248 chr17:38610236 synonymous SNV . 0 9 hm5C_associated_SNPs_26112 0 0 2 SND1 POSTAR2 ENCODE chr17:38610195-38610246
64251 chr18 21474905 21474905 1 + C G LUAD 21474924 + 21474904 21474944 41 ACCTGGCCACCATGGGCGAGCAGCTCCGCCTGGTCAAGTCT AGCTGGCCACCATGGGCGAGCAGCTCCGCCTGGTCAAGTCT < 41bp 1 0.158461822873548 1 0.193757891654968 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21474924 chr18:21474905 nonsynonymous SNV 0.084 3 2 hm5C_associated_SNPs_26113 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:21474876-21474908
64251 chr16 705355 705355 1 + C T LUAD 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGCGGCTCTGGCGGCTGCGTGGTGGGGTGCTGCGT < 41bp 1 0.480130335835965 1 0.402893155813217 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705355 synonymous SNV . 0 29 hm5C_associated_SNPs_26115 0 0 3 PPIG POSTAR2 ENCODE chr16:705306-705371
64251 chr17 34001246 34001246 1 + A T LUAD 34001266 + 34001246 34001286 41 ACTCACCGCCAAGGGCACATCTATATGGAAATGAACTTCAC TCTCACCGCCAAGGGCACATCTATATGGAAATGAACTTCAC < 41bp 1 0.539497070420532 1 0.664765954017639 experiment 0.921005859158936 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:34001266 chr17:34001246 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_26118 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:34001240-34001280
64251 chr17 43183001 43183001 1 + A G LUAD 43183002 + 43182982 43183022 41 CCTAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCG CCTAGGTTGGACTGGTGCTGCAATAACCAGTCACCAGTGCG < 41bp 1 0.33365763482752 1 0.113702744245529 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NMT1 ENSG00000136448 CDS Human protein_coding chr17:43183002 chr17:43183001 synonymous SNV . 0 20 hm5C_associated_SNPs_26132 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:43182984-43183022
64251 chr7 129096289 129096289 1 + G T LUAD 129096284 + 129096264 129096304 41 CCTGTTTCTTCCTTAGTTTACCCTCGGTGGATTTGAGCATC CCTGTTTCTTCCTTAGTTTACCCTCTGTGGATTTGAGCATC < 41bp 1 0.0966089638583822 1 0.0317192077636719 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096284 chr7:129096289 nonsynonymous SNV 0.980 5 26 hm5C_associated_SNPs_26133 0 0 5 BUD13 POSTAR2 ENCODE chr7:129096282-129096370
64251 chr20 57466789 57466789 1 + G A LUAD 57466769 + 57466749 57466789 41 GCCCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTG GCCCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTA < 41bp 1 0.758372248022316 1 0.579440236091614 experiment 0.483255503955367 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466769 chr20:57466789 nonsynonymous SNV 0.647 4 41 hm5C_associated_SNPs_26134 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57466789 57466789 1 + G A LUAD 57466771 + 57466751 57466791 41 CCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTGCC CCGGCCGCGCCCCGCCGCCGCCGCCGCCGCCATGGGCTACC < 41bp 1 0.302513107439725 1 0.192152351140976 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466771 chr20:57466789 nonsynonymous SNV 0.647 4 39 hm5C_associated_SNPs_26135 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr6 15487586 15487586 1 + A T LUAD 15487577 + 15487557 15487597 41 GTCAACACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCA GTCAACACGGGAGAAGGAACCTGTTCAAATACACAAAAGCA < 41bp 1 0.100268265550253 1 0.400203943252563 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15487577 chr6:15487586 nonsynonymous SNV 0.998 3 30 hm5C_associated_SNPs_26136 0 0 4 IGF2BP2 POSTAR2 ENCODE chr6:15487584-15487773
64251 chr12 105538144 105538144 1 + G A LUAD 105538149 + 105538129 105538169 41 TAAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAA TAAAGCTGGATGACCAAAACCCTTTCAAAGTTGGCATGAAA < 41bp 1 0.033884787505053 1 0.0599221587181091 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105538149 chr12:105538144 nonsynonymous SNV 0.997 3 16 hm5C_associated_SNPs_26138 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:105538107-105538167
64251 chr12 105538144 105538144 1 + G A LUAD 105538150 + 105538130 105538170 41 AAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAAG AAAGCTGGATGACCAAAACCCTTTCAAAGTTGGCATGAAAG < 41bp 1 0.048636970114879 1 0.0923659205436707 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105538150 chr12:105538144 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_26139 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:105538107-105538167
64251 chr4 6642869 6642869 1 + G A LUAD 6642862 + 6642842 6642882 41 CCGGGCGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGA CCGGGCGACGCGGCCGAGGGCCGGGCGACCAAGAGGTGCGA < 41bp 1 0.731281296228467 1 0.675227165222168 experiment 0.537437407543067 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642862 chr4:6642869 nonsynonymous SNV 0.001 0 28 hm5C_associated_SNPs_26140 0 0 6 DGCR8 POSTAR2 ENCODE chr4:6642865-6642870
64251 chr4 6642869 6642869 1 + G A LUAD 6642867 + 6642847 6642887 41 CGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGG CGACGCGGCCGAGGGCCGGGCGACCAAGAGGTGCGAGAAGG < 41bp 1 0.455389984763519 1 0.36418879032135 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642867 chr4:6642869 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_26141 0 0 6 DGCR8 POSTAR2 ENCODE chr4:6642865-6642870
64251 chr4 6642869 6642869 1 + G A LUAD 6642870 + 6642850 6642890 41 CGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGGCCG CGCGGCCGAGGGCCGGGCGACCAAGAGGTGCGAGAAGGCCG < 41bp 1 0.352763866299432 1 0.594481825828552 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642870 chr4:6642869 nonsynonymous SNV 0.001 0 20 hm5C_associated_SNPs_26142 0 0 6 DGCR8 POSTAR2 ENCODE chr4:6642865-6642870
64251 chr4 6642869 6642869 1 + G A LUAD 6642888 + 6642868 6642908 41 GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGA GACCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGA < 41bp 1 0.713090688130272 1 0.758887052536011 experiment 0.573818623739456 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642888 chr4:6642869 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_26143 0 0 6 DGCR8 POSTAR2 ENCODE chr4:6642865-6642870
64251 chr14 105814896 105814896 1 + G T LUAD 105814915 + 105814895 105814935 41 TGGTGATCGCTGTCAAGATGCAGGTGAGGCCGCTTGTGACC TTGTGATCGCTGTCAAGATGCAGGTGAGGCCGCTTGTGACC < 41bp 1 0.61201917753919 1 0.752837300300598 experiment 0.775961644921621 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS2 ENSG00000179364 CDS Human protein_coding chr14:105814915 chr14:105814896 synonymous SNV . 0 2 hm5C_associated_SNPs_26144 0 0 7 BUD13 POSTAR2 ENCODE chr14:105814835-105814913
64251 chr11 118516533 118516533 1 + T A LUAD 118516515 + 118516495 118516535 41 GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGG GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCAAGG < 41bp 1 0.599750416796097 1 0.798154592514038 experiment 0.800499166407807 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516515 chr11:118516533 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_26145 0 0 6 EFTUD2 POSTAR2 ENCODE chr11:118516499-118516552
64251 chr8 124787528 124787528 1 + G C LUAD 124787510 + 124787490 124787530 41 GAAAGGCTTGAGGATAACACCATTTTCATATTATACTGGGA GAAAGGCTTGAGGATAACACCATTTTCATATTATACTGCGA < 41bp 1 0.118186730883447 1 0.253320515155792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124787510 chr8:124787528 nonsynonymous SNV 0.991 0 39 hm5C_associated_SNPs_26147 0 0 1 PRPF8 POSTAR2 ENCODE chr8:124787523-124787581
64251 chr1 116940601 116940601 1 + G T LUAD 116940615 + 116940595 116940635 41 GAGATAGTGTTTGCCAGGACCTCCCCTCAGCAGAAGCTCAT GAGATATTGTTTGCCAGGACCTCCCCTCAGCAGAAGCTCAT < 41bp 1 0.211607873629241 1 0.234282404184341 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116940615 chr1:116940601 nonsynonymous SNV 0.986 3 7 hm5C_associated_SNPs_26148 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116940516-116940641
64251 chr14 73725989 73725989 1 + A G LUAD 73725978 + 73725958 73725998 41 TTTTGCTTCTTCTTTCTAGACTCCAGAGGCCAGTGGTGGGC TTTTGCTTCTTCTTTCTAGACTCCAGAGGCCGGTGGTGGGC < 41bp 1 0.711699576233853 1 0.933281302452087 experiment 0.576600847532295 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAPLN ENSG00000100767 CDS Human protein_coding chr14:73725978 chr14:73725989 nonsynonymous SNV 0.007 0 32 hm5C_associated_SNPs_26150 0 0 2 DDX24 POSTAR2 ENCODE chr14:73725975-73726020
64251 chr5 154169891 154169891 1 + C T LUAD 154169887 + 154169867 154169907 41 CCCTTCTTGTTCCCACAGAACACTCTGCTCCAGCCAAGGTG CCCTTCTTGTTCCCACAGAACACTTTGCTCCAGCCAAGGTG < 41bp 1 0.207837315222107 1 0.0433136224746704 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154169887 chr5:154169891 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_26152 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:154169880-154169900
64251 chr1 10435365 10435365 1 + C T LUAD 10435355 + 10435335 10435375 41 GCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTCAATGAC GCACAAAGCACCGTGGGGTCCTTTTGCAGGTCCTCAATGAC < 41bp 1 0.0389236587004145 1 0.03722083568573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10435355 chr1:10435365 nonsynonymous SNV 0.993 4 31 hm5C_associated_SNPs_26153 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:10435351-10435375
64251 chr8 107752683 107752683 1 + A G LUAD 107752684 + 107752664 107752704 41 CGAACAATGACAGGTTTAGACACCCCAGTGCTGATGGTGAT CGAACAATGACAGGTTTAGGCACCCCAGTGCTGATGGTGAT < 41bp 1 0.327816450122196 1 0.103542178869247 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXR1 ENSG00000164830 CDS Human protein_coding chr8:107752684 chr8:107752683 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_26154 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr8:107752680-107752702
64251 chr19 59060599 59060599 1 + A G LUAD 59060584 + 59060564 59060604 41 GAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTC GAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCGTTGTC < 41bp 1 0.51751653025059 1 0.600765287876129 experiment 0.96496693949882 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060584 chr19:59060599 nonsynonymous SNV 0.993 0 36 hm5C_associated_SNPs_26155 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr19:59060556-59060599
64251 chr19 59060599 59060599 1 + A G LUAD 59060588 + 59060568 59060608 41 CCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGG CCCTGGTGCCCCACCCCTGGCTGGCATGGCCGTTGTCAAGG < 41bp 1 0.465551658281973 1 0.0390163958072662 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060588 chr19:59060599 nonsynonymous SNV 0.993 0 32 hm5C_associated_SNPs_26156 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr19:59060556-59060599
64251 chr19 59060599 59060599 1 + A G LUAD 59060592 + 59060572 59060612 41 GGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGGTAAG GGTGCCCCACCCCTGGCTGGCATGGCCGTTGTCAAGGTAAG < 41bp 1 0.200655337102746 1 0.127493411302567 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060592 chr19:59060599 nonsynonymous SNV 0.993 0 28 hm5C_associated_SNPs_26157 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr19:59060556-59060599
64251 chr19 11145722 11145722 1 + G A LUAD 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGAAG < 41bp 1 0.452536668681979 1 0.489314198493958 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145722 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_26158 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145720-11145740
64251 chr19 11145722 11145722 1 + G A LUAD 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGAAGGAG < 41bp 1 0.215555597428935 1 0.418474853038788 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145722 nonsynonymous SNV 0.998 3 36 hm5C_associated_SNPs_26159 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145720-11145740
64251 chr19 46198725 46198725 1 + G T LUAD 46198713 + 46198693 46198733 41 AGTTCCTGGAGGCCACGCTGCGGTCCCTGACAGCAGGTTGG AGTTCCTGGAGGCCACGCTGCGGTCCCTGACATCAGGTTGG < 41bp 1 0.167357757991553 1 0.54576849937439 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198713 chr19:46198725 nonsynonymous SNV 0.628 1 33 hm5C_associated_SNPs_26160 0 0 2 DDX59 POSTAR2 ENCODE chr19:46198669-46198730
64251 chr6 160477509 160477509 1 + G A LUAD 160477524 + 160477504 160477544 41 CTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAACGAC CTGTGAAACACAGAGGCTGCCTGTCCCATTCAGACAACGAC < 41bp 1 0.0359169722868652 1 0.0890639126300812 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160477524 chr6:160477509 stopgain 1.000 1 6 hm5C_associated_SNPs_26161 0 0 2 EIF3H POSTAR2 ENCODE chr6:160477487-160477545
64251 chr9 109773236 109773236 1 + G C LUAD 109773231 + 109773211 109773251 41 CCATTGGGATAGACTTTTCCCTAAAGAATGAAACAGTAGCC CCATTGGGATAGACTTTTCCCTAAACAATGAAACAGTAGCC < 41bp 1 0.315805340627725 1 0.277455419301987 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109773231 chr9:109773236 nonsynonymous SNV 0.996 0 26 hm5C_associated_SNPs_26165 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:109773232-109773259
64251 chr19 4423358 4423358 1 + A G LUAD 4423372 + 4423352 4423392 41 GGAAAAAGGAAGAAGAGAAACGGTTAAGAGAAGAAGAGAAG GGAAAAGGGAAGAAGAGAAACGGTTAAGAGAAGAAGAGAAG < 41bp 1 0.176417650220058 1 0.469915986061096 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4423372 chr19:4423358 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_26166 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:4423336-4423370
64251 chr13 52293449 52293449 1 + A T LUAD 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGCGCCTGGGTGGTTATCGGACCAGTGCTGTGGCCTCA < 41bp 1 0.555653842544776 1 0.919079542160034 experiment 0.888692314910449 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293449 synonymous SNV . 0 14 hm5C_associated_SNPs_26167 0 0 3 DDX24 POSTAR2 ENCODE chr13:52293432-52293486
64251 chr4 1729567 1729567 1 + A T LUAD 1729555 + 1729535 1729575 41 TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCT TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCTGGTGCCCT < 41bp 1 0.725544985185181 1 0.643525958061218 experiment 0.548910029629637 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729555 chr4:1729567 synonymous SNV . 0 33 hm5C_associated_SNPs_26168 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr4:1729560-1729580
64251 chr11 64950964 64950964 1 + G T LUAD 64950967 + 64950947 64950987 41 GACTGCTGGCTCTTGGCGGCCATCGCCTCCCTCACTCTCAA GACTGCTGGCTCTTGGCTGCCATCGCCTCCCTCACTCTCAA < 41bp 1 0.291033560671282 1 0.167127281427383 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950967 chr11:64950964 synonymous SNV . 0 18 hm5C_associated_SNPs_26169 0 0 1 PPIG POSTAR2 ENCODE chr11:64950941-64950975
64251 chr1 228479688 228479688 1 + G T LUAD 228479689 + 228479669 228479709 41 GTGTGAACTGAGCAAGGTGGCCCCTGTGGAGTGGAGGAAGG GTGTGAACTGAGCAAGGTGTCCCCTGTGGAGTGGAGGAAGG < 41bp 1 0.0560750905162959 1 0.223068356513977 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228479689 chr1:228479688 nonsynonymous SNV 0.012 1 20 hm5C_associated_SNPs_26170 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228479663-228479701
64251 chr7 32598970 32598970 1 + T A LUAD 32598978 + 32598958 32598998 41 AGAGTCTTCCAATTACTGTACAACCTCAAGCTAATACGGGA AGAGTCTTCCAAATACTGTACAACCTCAAGCTAATACGGGA < 41bp 1 0.140184832921989 1 0.0681644082069397 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AVL9 ENSG00000105778 CDS Human protein_coding chr7:32598978 chr7:32598970 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_26171 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:32598948-32598975
64251 chr4 154318419 154318419 1 + A T LUAD 154318425 + 154318405 154318445 41 CACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA CACTTCGAGACCAATGGGAACAGCTAAAGGCAGAAGTAGAA < 41bp 1 0.262352903555626 1 0.402300715446472 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MND1 ENSG00000121211 CDS Human protein_coding chr4:154318425 chr4:154318419 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_26172 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:154318405-154318437
64251 chr9 131345051 131345051 1 + C A LUAD 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGA < 41bp 1 0.118527276077987 1 0.11281880736351 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345051 nonsynonymous SNV 0.997 3 41 hm5C_associated_SNPs_26173 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr9:131345033-131345059
64251 chr1 36754831 36754831 1 + G A LUAD 36754839 + 36754819 36754859 41 AGAAGCCTTTTCGGGGCAGTCAGTCTCCCAAAAGGTATAAG AGAAGCCTTTTCAGGGCAGTCAGTCTCCCAAAAGGTATAAG < 41bp 1 0.176168850821703 1 0.217451453208923 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36754839 chr1:36754831 nonsynonymous SNV 0.998 2 13 hm5C_associated_SNPs_26174 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:36754800-36754840
64251 chr6 44221294 44221294 1 + G T LUAD 44221288 + 44221268 44221308 41 CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT CAGTTCCTGATGAGATCCCCCCTCTCTAGGGCGATGAGGAT < 41bp 1 0.0508437026672261 1 0.067956268787384 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221288 chr6:44221294 stopgain 0.294 0 27 hm5C_associated_SNPs_26175 0 0 48 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44221294 44221294 1 + G T LUAD 44221289 + 44221269 44221309 41 AGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG AGTTCCTGATGAGATCCCCCCTCTCTAGGGCGATGAGGATG < 41bp 1 0.240679855442454 1 0.458399325609207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221289 chr6:44221294 stopgain 0.294 0 26 hm5C_associated_SNPs_26176 0 0 48 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr4 87691037 87691037 1 + G A LUAD 87691057 + 87691037 87691077 41 GCTCTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTG ACTCTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTG < 41bp 1 0.336810449479072 1 0.743921458721161 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87691057 chr4:87691037 synonymous SNV . 0 1 hm5C_associated_SNPs_26177 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:87691036-87691037
64251 chr7 2686509 2686509 1 + C T LUAD 2686507 + 2686487 2686527 41 GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCGC GCCCTGCTGCTCCTGGGGGCCGTCGCCCTGGCCTGCCTCGC < 41bp 1 0.295751789139809 1 0.545461714267731 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686507 chr7:2686509 nonsynonymous SNV 0.250 0 23 hm5C_associated_SNPs_26183 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:2686508-2686509
64251 chr12 132546780 132546780 1 + C T LUAD 132546776 + 132546756 132546796 41 AACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCT AACGACTCAGGGTGTTCGAGCGGTTACTTCTGTGACAGCCT < 41bp 1 0.0904410794382227 1 0.384392619132996 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546776 chr12:132546780 synonymous SNV . 0 25 hm5C_associated_SNPs_26184 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:132546750-132546784
64251 chr14 61201638 61201638 1 + A T LUAD 61201633 + 61201613 61201653 41 CACCAAATATCGGAACCCCTCCTTGAAGCTGATGGTGAATG CACCAAATATCGGAACCCCTCCTTGTAGCTGATGGTGAATG < 41bp 1 0.139479573075304 1 0.12993249297142 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61201633 chr14:61201638 stopgain 0.997 1 26 hm5C_associated_SNPs_26185 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:61201580-61201640
64251 chr14 24901483 24901483 1 + G T LUAD 24901497 + 24901477 24901517 41 AGTCCCGAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGGG AGTCCCTAGGAGCCTCCCTCCTCCAGCGGCTCCACAATGGG < 41bp 1 0.706247396402901 1 0.958176732063293 experiment 0.587505207194198 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout KHNYN ENSG00000100441 CDS Human protein_coding chr14:24901497 chr14:24901483 nonsynonymous SNV 0.819 0 7 hm5C_associated_SNPs_26187 0 0 3 DDX24 POSTAR2 ENCODE chr14:24901412-24901498
64251 chr5 54456044 54456044 1 + G A LUAD 54456062 + 54456042 54456082 41 CCGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT CCACTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT < 41bp 1 0.500625252458508 1 0.438946038484573 experiment 0.998749495082984 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456062 chr5:54456044 synonymous SNV . 0 3 hm5C_associated_SNPs_26188 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:54456018-54456058
64251 chr16 11133706 11133706 1 + A G LUAD 11133688 + 11133668 11133708 41 AGACCACCTACAACCACCCGCTAGCTGAAAGACTCATCAGG AGACCACCTACAACCACCCGCTAGCTGAAAGACTCATCGGG < 41bp 1 0.124504225546503 1 0.387456685304642 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133688 chr16:11133706 nonsynonymous SNV 0.991 3 39 hm5C_associated_SNPs_26189 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:11133689-11133711
64251 chr16 11133706 11133706 1 + A G LUAD 11133722 + 11133702 11133742 41 CATCAGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACT CATCGGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACT < 41bp 1 0.310680117153693 1 0.0139681100845337 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133722 chr16:11133706 nonsynonymous SNV 0.991 3 5 hm5C_associated_SNPs_26190 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:11133689-11133711
64251 chr16 11133706 11133706 1 + A G LUAD 11133726 + 11133706 11133746 41 AGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACTTGGG GGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACTTGGG < 41bp 1 0.0809649954498396 1 0.0444182157516479 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133726 chr16:11133706 nonsynonymous SNV 0.991 3 1 hm5C_associated_SNPs_26191 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:11133689-11133711
64251 chr12 104340715 104340715 1 + C G LUAD 104340701 + 104340681 104340721 41 ATGCTTCGCCTCAGTTTGAACATTGACCCTGATGCAAAGGT ATGCTTCGCCTCAGTTTGAACATTGACCCTGATGGAAAGGT < 41bp 1 0.0868667589813146 1 0.238312512636185 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340701 chr12:104340715 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_26192 0 0 12 GRWD1 POSTAR2 ENCODE chr12:104340707-104340719
64251 chr12 104340715 104340715 1 + C G LUAD 104340707 + 104340687 104340727 41 CGCCTCAGTTTGAACATTGACCCTGATGCAAAGGTTTGTAT CGCCTCAGTTTGAACATTGACCCTGATGGAAAGGTTTGTAT < 41bp 1 0.257201770598508 1 0.055212527513504 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340707 chr12:104340715 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_26193 0 0 12 GRWD1 POSTAR2 ENCODE chr12:104340707-104340719
64251 chr12 104340715 104340715 1 + C G LUAD 104340709 + 104340689 104340729 41 CCTCAGTTTGAACATTGACCCTGATGCAAAGGTTTGTATCC CCTCAGTTTGAACATTGACCCTGATGGAAAGGTTTGTATCC < 41bp 1 0.456682045974393 1 0.227345913648605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340709 chr12:104340715 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_26194 0 0 12 GRWD1 POSTAR2 ENCODE chr12:104340707-104340719
64251 chr11 69456155 69456155 1 + A C LUAD 69456153 + 69456133 69456173 41 CCCGATGCCAACCTCCTCAACGACCGGGTGCTGCGGGCCAT CCCGATGCCAACCTCCTCAACGCCCGGGTGCTGCGGGCCAT < 41bp 1 0.598690363244307 1 0.161620736122131 experiment 0.802619273511387 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCND1 ENSG00000110092 CDS Human protein_coding chr11:69456153 chr11:69456155 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_26206 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:69456125-69456163
64251 chr2 235949751 235949751 1 + A G LUAD 235949741 + 235949721 235949761 41 ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAAC ACATCCCCTCCTCCTATGTGCAGCCCTTGAGCTACCGGAAC < 41bp 1 0.169833310372433 1 0.195490509271622 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949741 chr2:235949751 nonsynonymous SNV 0.968 1 31 hm5C_associated_SNPs_26207 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr2 235949751 235949751 1 + A G LUAD 235949744 + 235949724 235949764 41 TCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA TCCCCTCCTCCTATGTGCAGCCCTTGAGCTACCGGAACTCA < 41bp 1 0.0188363049366832 1 0.0282925963401794 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949744 chr2:235949751 nonsynonymous SNV 0.968 1 28 hm5C_associated_SNPs_26208 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr2 235949751 235949751 1 + A G LUAD 235949745 + 235949725 235949765 41 CCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA CCCCTCCTCCTATGTGCAGCCCTTGAGCTACCGGAACTCAA < 41bp 1 0.021731550779309 1 0.102258324623108 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949745 chr2:235949751 nonsynonymous SNV 0.968 1 27 hm5C_associated_SNPs_26209 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235949737-235949775
64251 chr6 27101043 27101043 1 + G A LUAD 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACCGCCGAGATCCTGAAACTGGCGG < 41bp 1 0.583839975198455 1 0.589303493499756 experiment 0.83232004960309 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101043 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_26210 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101043 27101043 1 + G A LUAD 27101050 + 27101030 27101070 41 CGCCGAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACA CGCCGAGATCCTGAAACTGGCGGGCAACGCGGCCCGCGACA < 41bp 1 0.788786797505207 1 0.92205673456192 experiment 0.422426404989585 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101050 chr6:27101043 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_26211 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101043 27101043 1 + G A LUAD 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGAAACTGGCGGGCAACGCGGCCCGCGACAACAA < 41bp 1 0.500124047467162 1 0.517935752868652 experiment 0.999751905065677 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101043 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_26212 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101043 27101043 1 + G A LUAD 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GAAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC < 41bp 1 0.314415631447084 1 0.272582471370697 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101043 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_26213 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr6 27101043 27101043 1 + G A LUAD 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG AAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.39528136648427 1 0.153074681758881 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101043 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_26214 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:27101000-27101060
64251 chr19 13264219 13264219 1 + G T LUAD 13264217 + 13264197 13264237 41 CCTCTGACCCTCGCCTGCACCCGCCCCGAGAAGCCGAGTCC CCTCTGACCCTCGCCTGCACCCTCCCCGAGAAGCCGAGTCC < 41bp 1 0.0737518433045356 1 0.0616758167743683 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IER2 ENSG00000160888 CDS Human protein_coding chr19:13264217 chr19:13264219 synonymous SNV . 0 23 hm5C_associated_SNPs_26219 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:13264180-13264228
64251 chr11 118997723 118997723 1 + C T LUAD 118997717 + 118997697 118997737 41 CTACAGTGTGAGTGGGGGTCCTGCTCCTTTGTGTGCTCAAC CTACAGTGTGAGTGGGGGTCCTGCTCTTTTGTGTGCTCAAC < 41bp 1 0.416180332897656 1 0.400350540876389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HINFP ENSG00000172273 CDS Human protein_coding chr11:118997717 chr11:118997723 synonymous SNV . 0 27 hm5C_associated_SNPs_26220 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:118997687-118997731
64251 chr19 47491298 47491298 1 + G C LUAD 47491283 + 47491263 47491303 41 ATCTACCGGGTCAGCGGGAACAAGTCTGAGATGGAGAGTCT ATCTACCGGGTCAGCGGGAACAAGTCTGAGATGGACAGTCT < 41bp 1 0.390934784219615 1 0.404889047145844 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491283 chr19:47491298 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_26221 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47491257-47491304
64251 chr2 171818217 171818217 1 + C T LUAD 171818210 + 171818190 171818230 41 TTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCC TTATTGCCACCACAAGTAAACCAGTCCTTCACTTCTGTGCC < 41bp 1 0.215165798144248 1 0.0841170847415924 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818210 chr2:171818217 nonsynonymous SNV 0.992 1 28 hm5C_associated_SNPs_26222 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:171818205-171818225
64251 chr20 36149769 36149769 1 - C T LUAD 36149751 - 36149731 36149771 41 ATGAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGT ATAAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGT < 41bp 1 0.529347612276973 1 0.522792100906372 experiment 0.941304775446054 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149751 chr20:36149769 synonymous SNV . 0 3 hm5C_associated_SNPs_26223 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:36149747-36149798
64251 chr20 36149769 36149769 1 - C T LUAD 36149752 - 36149732 36149772 41 GATGAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGG GATAAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGG < 41bp 1 0.267623611684503 1 0.209462463855743 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149752 chr20:36149769 synonymous SNV . 0 4 hm5C_associated_SNPs_26224 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:36149747-36149798
64251 chr15 50782575 50782575 1 + A C LUAD 50782564 + 50782544 50782584 41 TCATCTGCACCTCCTTCCACCCCTCCAACTCATAAAGCCAA TCATCTGCACCTCCTTCCACCCCTCCAACTCCTAAAGCCAA < 41bp 1 0.0417352234268185 1 0.203920006752014 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50782564 chr15:50782575 nonsynonymous SNV 1.000 0 32 hm5C_associated_SNPs_26226 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:50782574-50782612
64251 chr17 39978046 39978046 1 + G T LUAD 39978062 + 39978042 39978082 41 CAAGGATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT CAAGTATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT < 41bp 1 0.511313335971648 1 0.722146451473236 experiment 0.977373328056704 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978062 chr17:39978046 nonsynonymous SNV 0.912 4 5 hm5C_associated_SNPs_26227 0 0 3 BUD13 POSTAR2 ENCODE chr17:39978027-39978066
64251 chr15 67073643 67073643 1 + G T LUAD 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGCGCCCTGCGGCCGCGCCCTGGTCGTGCGCAAGGT < 41bp 1 0.41970818774368 1 0.168696820735931 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073643 nonsynonymous SNV 0.996 4 13 hm5C_associated_SNPs_26228 0 0 3 METAP2 POSTAR2 ENCODE chr15:67073613-67073666
64251 chr17 4905834 4905834 1 + C T LUAD 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTCTCTGCGGGTCTGGGAGCACCCCATCCTGGG < 41bp 1 0.753168954177932 1 0.724071741104126 experiment 0.493662091644137 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905834 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_26229 1 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4905814-4905838
64251 chr9 7174678 7174678 1 + C A LUAD 7174666 + 7174646 7174686 41 TTTAAGAATGAATATGTGGCCGACCCTGTATACCGCACTTT TTTAAGAATGAATATGTGGCCGACCCTGTATAACGCACTTT < 41bp 1 0.120788357514795 1 0.0637040436267853 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4C ENSG00000107077 CDS Human protein_coding chr9:7174666 chr9:7174678 stopgain 0.990 0 33 hm5C_associated_SNPs_26230 0 0 1 GRWD1 POSTAR2 ENCODE chr9:7174677-7174727
64251 chrX 73044544 73044544 1 - C A LUAD 73044553 - 73044533 73044573 41 GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAATGT GAGATCCAGACCGAAAGTCACTTAATTCATCTTGCGAATGT < 41bp 1 0.130063910808732 1 0.031955897808075 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044553 chrX:73044544 . . 0 30 hm5C_associated_SNPs_26231 0 0 65 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044544 73044544 1 - C A LUAD 73044555 - 73044535 73044575 41 GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAAT GTGAGATCCAGACCGAAAGTCACTTAATTCATCTTGCGAAT < 41bp 1 0.0767115049419079 1 0.0437181890010834 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044555 chrX:73044544 . . 0 32 hm5C_associated_SNPs_26232 0 0 65 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73046470 73046470 1 - G T LUAD 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAA < 41bp 1 0.605874590821604 1 0.707633137702942 experiment 0.788250818356792 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046470 . . 0 41 hm5C_associated_SNPs_26233 0 0 90 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046451-73046474
64251 chr7 98528439 98528439 1 + G T LUAD 98528424 + 98528404 98528444 41 AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTA AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGTACTTA < 41bp 1 0.0423969553469467 1 0.140683174133301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528424 chr7:98528439 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_26234 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr7 98528439 98528439 1 + G T LUAD 98528441 + 98528421 98528461 41 CTTCTCTTTGTCATGATGGACTTAACTGGAGAGGTAGGTGA CTTCTCTTTGTCATGATGTACTTAACTGGAGAGGTAGGTGA < 41bp 1 0.119082205614942 1 0.0902923345565796 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528441 chr7:98528439 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_26235 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr7 36445887 36445887 1 + A T LUAD 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCTG < 41bp 1 0.569817662435417 1 0.357682853937149 experiment 0.860364675129166 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445887 synonymous SNV . 0 40 hm5C_associated_SNPs_26236 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr15 45003799 45003799 1 + G T LUAD 45003787 + 45003767 45003807 41 CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATC CTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGTAGGCTATC < 41bp 1 0.138604235078904 1 0.103954315185547 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B2M ENSG00000166710 CDS Human protein_coding chr15:45003787 chr15:45003799 stopgain 0.056 0 33 hm5C_associated_SNPs_26237 0 0 34 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr10 128797638 128797638 1 + G T LUAD 128797628 + 128797608 128797648 41 ATTTTTCAAGTGAGAACTACCTGGTTCGCTGGTCCAGTTCA ATTTTTCAAGTGAGAACTACCTGGTTCGCTTGTCCAGTTCA < 41bp 1 0.201257782676851 1 0.37649992108345 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128797628 chr10:128797638 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_26238 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:128797623-128797654
64251 chr16 22328517 22328517 1 + G A LUAD 22328499 + 22328479 22328519 41 CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTAAT < 41bp 1 0.166686031115776 1 0.144210040569305 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22328499 chr16:22328517 synonymous SNV . 0 39 hm5C_associated_SNPs_26239 0 0 3 DDX24 POSTAR2 ENCODE chr16:22328432-22328521
64251 chr7 129946636 129946636 1 + G C LUAD 129946651 + 129946631 129946671 41 TATCTGATTACCAGAGGGATCCAGCTATCACCTCCATCTTG TATCTCATTACCAGAGGGATCCAGCTATCACCTCCATCTTG < 41bp 1 0.181888388324674 1 0.237688153982162 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CPA4 ENSG00000128510 CDS Human protein_coding chr7:129946651 chr7:129946636 nonsynonymous SNV 0.990 4 6 hm5C_associated_SNPs_26240 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:129946616-129946637
64251 chr12 4459029 4459029 1 + G T LUAD 4459031 + 4459011 4459051 41 CAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGAC CAAATTTTGCAAAGATATTACGGTAAAGTATGACTCAAGAC < 41bp 1 0.494921194639183 1 0.504848480224609 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIGAR ENSG00000078237 CDS Human protein_coding chr12:4459031 chr12:4459029 nonsynonymous SNV 0.624 0 19 hm5C_associated_SNPs_26241 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:4459029-4459049
64251 chr12 4459026 4459026 1 + T G LUAD 4459031 + 4459011 4459051 41 CAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGAC CAAATTTTGCAAAGAGATGACGGTAAAGTATGACTCAAGAC < 41bp 1 0.47007253287313 1 0.406071037054062 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIGAR ENSG00000078237 CDS Human protein_coding chr12:4459031 chr12:4459026 nonsynonymous SNV 0.672 1 16 hm5C_associated_SNPs_26242 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr12:4459024-4459049
64251 chr2 233671355 233671355 1 + C T LUAD 233671347 + 233671327 233671367 41 GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG GGGTTCCCTTTTCTCCAGGTCCAGCTCCTCCTCCTCATATG < 41bp 1 0.119984989638748 1 0.0547673404216766 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671347 chr2:233671355 synonymous SNV . 0 29 hm5C_associated_SNPs_26243 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671355 233671355 1 + C T LUAD 233671348 + 233671328 233671368 41 GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG GGTTCCCTTTTCTCCAGGTCCAGCTCCTCCTCCTCATATGG < 41bp 1 0.183136705246623 1 0.0759700834751129 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671348 chr2:233671355 synonymous SNV . 0 28 hm5C_associated_SNPs_26244 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671355 233671355 1 + C T LUAD 233671351 + 233671331 233671371 41 TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA TCCCTTTTCTCCAGGTCCAGCTCCTCCTCCTCATATGGTAA < 41bp 1 0.119544706785619 1 0.118804126977921 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671351 chr2:233671355 synonymous SNV . 0 25 hm5C_associated_SNPs_26245 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671355 233671355 1 + C T LUAD 233671354 + 233671334 233671374 41 CTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTA CTTTTCTCCAGGTCCAGCTCCTCCTCCTCATATGGTAAGTA < 41bp 1 0.138126035790418 1 0.1811703145504 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671354 chr2:233671355 synonymous SNV . 0 22 hm5C_associated_SNPs_26246 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671355 233671355 1 + C T LUAD 233671356 + 233671336 233671376 41 TTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACC TTTCTCCAGGTCCAGCTCCTCCTCCTCATATGGTAAGTACC < 41bp 1 0.0324468636557143 1 0.239792138338089 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671356 chr2:233671355 synonymous SNV . 0 20 hm5C_associated_SNPs_26247 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671355 233671355 1 + C T LUAD 233671357 + 233671337 233671377 41 TTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACCT TTCTCCAGGTCCAGCTCCTCCTCCTCATATGGTAAGTACCT < 41bp 1 0.211168547451518 1 0.112147361040115 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671357 chr2:233671355 synonymous SNV . 0 19 hm5C_associated_SNPs_26248 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr5 109065175 109065175 1 + G T LUAD 109065166 + 109065146 109065186 41 GTCTGAGATCTCTTACCTTTCAAAGTGGTGGGATATTATAG GTCTGAGATCTCTTACCTTTCAAAGTGGTTGGATATTATAG < 41bp 1 0.345059918468236 1 0.763043403625488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109065166 chr5:109065175 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_26249 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:109065160-109065180
64251 chr2 10188397 10188397 1 + G T LUAD 10188402 + 10188382 10188422 41 TCCCCAGTTGTCTGTGGGGACTGTGAGACCCATCCTAGCTC TCCCCAGTTGTCTGTTGGGACTGTGAGACCCATCCTAGCTC < 41bp 1 0.572340566919492 1 0.0599119365215302 experiment 0.855318866161016 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188402 chr2:10188397 synonymous SNV . 0 16 hm5C_associated_SNPs_26251 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:10188394-10188412
64251 chr17 21731048 21731048 1 + A G LUAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGACCAGCGGAGGCTCATCTT < 41bp 1 0.306630879175833 1 0.449589520692825 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731048 nonsynonymous SNV 0.887 2 29 hm5C_associated_SNPs_26254 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr19 54711356 54711356 1 + G T LUAD 54711362 + 54711342 54711382 41 CGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAG CGCTCTCCCTACGGTGGTGGCCGCCCGGGCCGCGTGAAGAG < 41bp 1 0.344894900936594 1 0.150362640619278 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711362 chr19:54711356 synonymous SNV . 0 15 hm5C_associated_SNPs_26255 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54711343-54711364
64251 chr19 54711356 54711356 1 + G T LUAD 54711363 + 54711343 54711383 41 GCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGG GCTCTCCCTACGGTGGTGGCCGCCCGGGCCGCGTGAAGAGG < 41bp 1 0.536020744931297 1 0.248681217432022 experiment 0.927958510137405 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711363 chr19:54711356 synonymous SNV . 0 14 hm5C_associated_SNPs_26256 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54711343-54711364
64251 chr11 64863748 64863748 1 + C G LUAD 64863730 + 64863710 64863750 41 TGCAGTTGGAACGATGGCGGCGGCAGCTGCCGCCGGGCCTA TGCAGTTGGAACGATGGCGGCGGCAGCTGCCGCCGGGCGTA < 41bp 1 0.757327579661946 1 0.814152657985687 experiment 0.485344840676108 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VPS51 ENSG00000149823 CDS Human protein_coding chr11:64863730 chr11:64863748 nonsynonymous SNV 0.001 1 39 hm5C_associated_SNPs_26258 0 0 2 DDX3X POSTAR2 ENCODE chr11:64863679-64863821
64251 chr11 64863748 64863748 1 + C G LUAD 64863739 + 64863719 64863759 41 AACGATGGCGGCGGCAGCTGCCGCCGGGCCTAGCCCGGGGT AACGATGGCGGCGGCAGCTGCCGCCGGGCGTAGCCCGGGGT < 41bp 1 0.243798962756821 1 0.562328517436981 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VPS51 ENSG00000149823 CDS Human protein_coding chr11:64863739 chr11:64863748 nonsynonymous SNV 0.001 1 30 hm5C_associated_SNPs_26259 0 0 2 DDX3X POSTAR2 ENCODE chr11:64863679-64863821
64251 chr11 64863748 64863748 1 + C G LUAD 64863742 + 64863722 64863762 41 GATGGCGGCGGCAGCTGCCGCCGGGCCTAGCCCGGGGTCTG GATGGCGGCGGCAGCTGCCGCCGGGCGTAGCCCGGGGTCTG < 41bp 1 0.779409272159515 1 0.95556503534317 experiment 0.44118145568097 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VPS51 ENSG00000149823 CDS Human protein_coding chr11:64863742 chr11:64863748 nonsynonymous SNV 0.001 1 27 hm5C_associated_SNPs_26260 0 0 2 DDX3X POSTAR2 ENCODE chr11:64863679-64863821
64251 chr10 4877971 4877971 1 + C G LUAD 4877959 + 4877939 4877979 41 TTGCCTCTGGACGAGAGCAACATGGTTATTCCCAGTGACAC TTGCCTCTGGACGAGAGCAACATGGTTATTCCGAGTGACAC < 41bp 1 0.607219184410967 1 0.0910830199718475 experiment 0.785561631178066 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKR1E2 ENSG00000165568 CDS Human protein_coding chr10:4877959 chr10:4877971 synonymous SNV . 0 33 hm5C_associated_SNPs_26261 0 0 1 DDX24 POSTAR2 ENCODE chr10:4877930-4878003
64251 chr1 200730028 200730028 1 + C G LUAD 200730036 + 200730016 200730056 41 CCAGGAACACATCAAACCACCTGTTGTTAATTTGCTTCTAT CCAGGAACACATGAAACCACCTGTTGTTAATTTGCTTCTAT < 41bp 1 0.218143512465549 1 0.0623067021369934 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200730036 chr1:200730028 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_26262 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:200729961-200730028
64251 chr19 1440453 1440453 1 + C G LUAD 1440440 + 1440420 1440460 41 ATCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTA ATCGGGGCCACCCACTCCTCCCGCTTCATCCCTGTCAAGTA < 41bp 1 0.234203837951605 1 0.159734845161438 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440440 chr19:1440453 nonsynonymous SNV 0.941 1 34 hm5C_associated_SNPs_26263 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr19 1440453 1440453 1 + C G LUAD 1440441 + 1440421 1440461 41 TCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTAA TCGGGGCCACCCACTCCTCCCGCTTCATCCCTGTCAAGTAA < 41bp 1 0.280710597359525 1 0.260784804821014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440441 chr19:1440453 nonsynonymous SNV 0.941 1 33 hm5C_associated_SNPs_26264 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr13 100188902 100188902 1 + G A LUAD 100188911 + 100188891 100188931 41 GTTACGATGTTGAAGATGGTCAGAGGTTCTGTAATCCTGGA GTTACGATGTTAAAGATGGTCAGAGGTTCTGTAATCCTGGA < 41bp 1 0.719800974739286 1 0.708781838417053 experiment 0.560398050521428 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100188911 chr13:100188902 nonsynonymous SNV 0.996 1 12 hm5C_associated_SNPs_26265 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr13:100188862-100188931
64251 chr19 39125691 39125691 1 + G C LUAD 39125675 + 39125655 39125695 41 GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCT GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCACATCT < 41bp 1 0.240134337453579 1 0.414335250854492 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125675 chr19:39125691 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_26266 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr19 39125691 39125691 1 + G C LUAD 39125679 + 39125659 39125699 41 AAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCTTCAT AAATACGGCTGGAGTGCCGACGAGTCGGGGCACATCTTCAT < 41bp 1 0.624291596377646 1 0.515478312969208 experiment 0.751416807244709 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125679 chr19:39125691 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_26267 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr1 151020365 151020365 1 + G A LUAD 151020375 + 151020355 151020395 41 TCCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAA TCCTGCTGCTAAATCTGGGTCCCCGGGCGGCGGGGGCCCAA < 41bp 1 0.601644535584878 1 0.108488738536835 experiment 0.796710928830243 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020375 chr1:151020365 synonymous SNV . 0 11 hm5C_associated_SNPs_26268 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020365 151020365 1 + G A LUAD 151020376 + 151020356 151020396 41 CCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAG CCTGCTGCTAAATCTGGGTCCCCGGGCGGCGGGGGCCCAAG < 41bp 1 0.731718275157174 1 0.621430933475494 experiment 0.536563449685653 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020376 chr1:151020365 synonymous SNV . 0 10 hm5C_associated_SNPs_26269 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020365 151020365 1 + G A LUAD 151020377 + 151020357 151020397 41 CTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAGG CTGCTGCTAAATCTGGGTCCCCGGGCGGCGGGGGCCCAAGG < 41bp 1 0.740315362325182 1 0.69337010383606 experiment 0.519369275349637 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020377 chr1:151020365 synonymous SNV . 0 9 hm5C_associated_SNPs_26270 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr3 169710594 169710594 1 + A C LUAD 169710589 + 169710569 169710609 41 GTCCGACAGTGAGGAAAAGTCAGACAGTGAGAAAAAGGAAG GTCCGACAGTGAGGAAAAGTCAGACCGTGAGAAAAAGGAAG < 41bp 1 0.479059294549183 1 0.13385397195816 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SEC62 ENSG00000008952 CDS Human protein_coding chr3:169710589 chr3:169710594 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_26273 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:169710584-169710598
64251 chr3 169710594 169710594 1 + A C LUAD 169710593 + 169710573 169710613 41 GACAGTGAGGAAAAGTCAGACAGTGAGAAAAAGGAAGATGA GACAGTGAGGAAAAGTCAGACCGTGAGAAAAAGGAAGATGA < 41bp 1 0.248636009106146 1 0.292787998914719 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SEC62 ENSG00000008952 CDS Human protein_coding chr3:169710593 chr3:169710594 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_26274 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:169710584-169710598
64251 chr16 14403171 14403171 1 + G T LUAD 14403172 + 14403152 14403192 41 AAATGAGGGACTTTTGGGGGCAGATGTGTTTCCATTCCACT AAATGAGGGACTTTTGGGGTCAGATGTGTTTCCATTCCACT < 41bp 1 0.431782100398602 1 0.375550895929337 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR365A ENSG00000199130 ncRNA_exonic Human miRNA chr16:14403172 chr16:14403171 . . 0 20 hm5C_associated_SNPs_26275 0 0 2 QKI POSTAR2 GSE21578,GSM545211 chr16:14403156-14403179
64251 chr11 71948810 71948810 1 + G C LUAD 71948820 + 71948800 71948840 41 CCCGCATCCGGGAGAGCATCCAGGAAGACCTGGCAGAGGAG CCCGCATCCGCGAGAGCATCCAGGAAGACCTGGCAGAGGAG < 41bp 1 0.766161703138401 1 0.870271444320679 experiment 0.467676593723197 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71948820 chr11:71948810 synonymous SNV 0.995 0 11 hm5C_associated_SNPs_26276 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:71948739-71948813
64251 chr12 109547647 109547647 1 + T G LUAD 109547637 + 109547617 109547657 41 TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAGACG TTCTTGATCTTTTTCAGAAGCGGCACCATGGACTACAGACG < 41bp 1 0.603192383882606 1 0.319119513034821 experiment 0.793615232234788 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547637 chr12:109547647 nonsynonymous SNV 0.963 4 31 hm5C_associated_SNPs_26277 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr2 216214301 216214301 1 + G T LUAD 216214285 + 216214265 216214305 41 GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTTACAA < 41bp 1 0.70194537325701 1 0.18722864985466 experiment 0.59610925348598 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216214285 chr2:216214301 nonsynonymous SNV 0.756 4 37 hm5C_associated_SNPs_26283 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:216214271-216214303
64251 chr17 29554590 29554590 1 + T A LUAD 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATGGGAACAAGCAACAAAGCTAATCCATAACTATCCAAAA < 41bp 1 0.123400347122193 1 0.0754722654819489 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554590 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_26299 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:29554582-29554612
64251 chr12 53427591 53427591 1 + T C LUAD 53427592 + 53427572 53427612 41 AAGTTTCATTTAACTTAGGTCCCCCCCAAAGACCCAAACTG AAGTTTCATTTAACTTAGGCCCCCCCCAAAGACCCAAACTG < 41bp 1 0.0324027989849194 1 0.080089658498764 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53427592 chr12:53427591 synonymous SNV . 0 20 hm5C_associated_SNPs_26300 0 0 6 LIN28B POSTAR2 ENCODE chr12:53427589-53427622
64251 chr5 70818760 70818760 1 + C T LUAD 70818769 + 70818749 70818789 41 AAGAGCAATATCTCAATAAACTAACAAGGTAACATTTTATT AAGAGCAATATTTCAATAAACTAACAAGGTAACATTTTATT < 41bp 1 0.0839834388002133 1 0.0887843072414398 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BDP1 ENSG00000145734 CDS Human protein_coding chr5:70818769 chr5:70818760 nonsynonymous SNV 0.006 0 12 hm5C_associated_SNPs_26301 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:70818719-70818766
64251 chr3 47385291 47385291 1 + G T LUAD 47385299 + 47385279 47385319 41 CGCCTCTACGCTGTTGGGGGCTACGACGGACAGTCAAACCT CGCCTCTACGCTTTTGGGGGCTACGACGGACAGTCAAACCT < 41bp 1 0.212410983148545 1 0.361970245838165 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385299 chr3:47385291 nonsynonymous SNV 0.892 4 13 hm5C_associated_SNPs_26302 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:47385290-47385291
64251 chr6 52288786 52288786 1 + G T LUAD 52288769 + 52288749 52288789 41 AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAACGGCT AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAACTGCT < 41bp 1 0.241576546617004 1 0.327680468559265 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52288769 chr6:52288786 nonsynonymous SNV 0.995 4 38 hm5C_associated_SNPs_26303 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:52288765-52288786
64251 chrX 107834438 107834438 1 + C A LUAD 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCATGCT < 41bp 1 0.588183323439754 1 0.857790410518646 experiment 0.823633353120491 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834438 nonsynonymous SNV 0.844 2 37 hm5C_associated_SNPs_26306 0 0 2 PPIG POSTAR2 ENCODE chrX:107834381-107834439
64251 chr11 314316 314316 1 + G A LUAD 314324 + 314304 314344 41 TCTTCTTGAACTGGTGCTGTCTGGGCTTCATAGCATTCGCC TCTTCTTGAACTAGTGCTGTCTGGGCTTCATAGCATTCGCC < 41bp 1 0.75470729351152 1 0.363445580005646 experiment 0.490585412976959 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control IFITM1 ENSG00000185885 CDS Human protein_coding chr11:314324 chr11:314316 stopgain 0.013 0 13 hm5C_associated_SNPs_26307 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:314286-314324
64251 chr16 2106212 2106212 1 + G C LUAD 2106203 + 2106183 2106223 41 GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCGTCCGGAC GGTGCTCCCTGCAGGATGATCTGTCTGCTCTGCGTCCGGAC < 41bp 1 0.294455408891048 1 0.155894190073013 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2106203 chr16:2106212 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_26309 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2106203-2106238
64251 chr3 38022323 38022323 1 + G A LUAD 38022310 + 38022290 38022330 41 CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAG CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACATGTACAG < 41bp 1 0.734506683924317 1 0.725567519664764 experiment 0.530986632151366 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022310 chr3:38022323 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_26310 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022293-38022327
64251 chr11 44129683 44129683 1 + G C LUAD 44129673 + 44129653 44129693 41 AATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACAC AATGAACTGCTCATGGCCATCTCAGACAGTCACTACTACAC < 41bp 1 0.600022917699763 1 0.383938997983932 experiment 0.799954164600474 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129673 chr11:44129683 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_26311 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:44129680-44129700
64251 chr1 76255022 76255022 1 + A T LUAD 76255012 + 76254992 76255032 41 CTAGTATCGGACATGATCCTCATCTTTTATACACTCTTAGT CTAGTATCGGACATGATCCTCATCTTTTATTCACTCTTAGT < 41bp 1 0.193446105573816 1 0.0396080017089844 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255012 chr1:76255022 nonsynonymous SNV 0.997 4 31 hm5C_associated_SNPs_26312 0 0 46 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:76254955-76255066
64251 chr11 67052428 67052428 1 + G T LUAD 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCCCAACCGCCTCTAGTGGCGGGGCGAGGGCGAGGCCCCG < 41bp 1 0.764009305203749 1 0.938717007637024 experiment 0.471981389592503 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052428 stopgain 0.829 0 15 hm5C_associated_SNPs_26313 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052428 67052428 1 + G T LUAD 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCTAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG < 41bp 1 0.651376201377979 1 0.891974687576294 experiment 0.697247597244041 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052428 stopgain 0.829 0 10 hm5C_associated_SNPs_26314 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr7 101459331 101459331 1 + G C LUAD 101459315 + 101459295 101459335 41 CTCAATATGTCTCAAGATGGCGGCCAATGTGGGATCGATGT CTCAATATGTCTCAAGATGGCGGCCAATGTGGGATCCATGT < 41bp 1 0.118986008688794 1 0.255511224269867 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101459315 chr7:101459331 synonymous SNV . 0 37 hm5C_associated_SNPs_26315 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:101459301-101459334
64251 chr4 6925430 6925430 1 + G T LUAD 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTTCGCGC < 41bp 1 0.0219637511231026 1 0.0201244056224823 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925430 nonsynonymous SNV 0.320 1 36 hm5C_associated_SNPs_26317 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr7 100485430 100485430 1 + G T LUAD 100485418 + 100485398 100485438 41 GTTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC GTTTTTTAACAACTTCCTCACTGATGCTAAGCTCCCAGCTC < 41bp 1 0.475664993219727 1 0.215980291366577 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485418 chr7:100485430 nonsynonymous SNV 0.980 3 33 hm5C_associated_SNPs_26319 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:100485400-100485440
64251 chr16 77775669 77775669 1 + C G LUAD 77775688 + 77775668 77775708 41 CCTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC CGTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGC < 41bp 1 0.664101674111339 1 0.507306158542633 experiment 0.671796651777322 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775688 chr16:77775669 nonsynonymous SNV 0.128 4 2 hm5C_associated_SNPs_26320 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr16 77775669 77775669 1 + C G LUAD 77775689 + 77775669 77775709 41 CTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA GTGAAGACGGTGTCACTTACCAGATCAAGGGAATGACGGCA < 41bp 1 0.556299241216711 1 0.719906628131866 experiment 0.887401517566578 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUDT7 ENSG00000140876 CDS Human protein_coding chr16:77775689 chr16:77775669 nonsynonymous SNV 0.128 4 1 hm5C_associated_SNPs_26321 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77775664-77775701
64251 chr10 104157747 104157747 1 + G A LUAD 104157753 + 104157733 104157773 41 CATAGAATCTCCGGGGGCATCAAACCTGAAGATTTCTCGAA CATAGAATCTCCGGAGGCATCAAACCTGAAGATTTCTCGAA < 41bp 1 0.236784970757438 1 0.603858530521393 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104157753 chr10:104157747 nonsynonymous SNV 0.038 4 15 hm5C_associated_SNPs_26327 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:104157740-104157760
64251 chr11 67818087 67818087 1 + G A LUAD 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTAATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC < 41bp 1 0.036477477013701 1 0.526453614234924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818087 synonymous SNV . 0 4 hm5C_associated_SNPs_26330 0 0 10 DDX55 POSTAR2 ENCODE chr11:67818038-67818127
64251 chr11 67818087 67818087 1 + G A LUAD 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTAATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT < 41bp 1 0.142215045007049 1 0.509085178375244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818087 synonymous SNV . 0 3 hm5C_associated_SNPs_26331 0 0 10 DDX55 POSTAR2 ENCODE chr11:67818038-67818127
64251 chr9 36633175 36633175 1 + T C LUAD 36633167 + 36633147 36633187 41 TGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAG TGGATCATGCAAGATTACAACTATCCTGCTGAGTGGCAAAG < 41bp 1 0.12349299019693 1 0.039573460817337 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MELK ENSG00000165304 CDS Human protein_coding chr9:36633167 chr9:36633175 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_26332 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36633133-36633197
64251 chr5 82868259 82868259 1 + C A LUAD 82868273 + 82868253 82868293 41 CCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG CCCAACAAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG < 41bp 1 0.034282876218703 1 0.0305226445198059 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868273 chr5:82868259 nonsynonymous SNV 0.998 4 7 hm5C_associated_SNPs_26334 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:82868240-82868260
64251 chr5 82868259 82868259 1 + C A LUAD 82868278 + 82868258 82868298 41 CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG CAAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG < 41bp 1 0.47969610502974 1 0.634069442749023 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868278 chr5:82868259 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_26335 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:82868240-82868260
64251 chr19 41111393 41111393 1 + C T LUAD 41111411 + 41111391 41111431 41 GGCCCTTGGGAGGAGGCGGACGCTGAGGCGGTGGCGCGGGC GGTCCTTGGGAGGAGGCGGACGCTGAGGCGGTGGCGCGGGC < 41bp 1 0.64168613843597 1 0.56363320350647 experiment 0.71662772312806 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41111411 chr19:41111393 synonymous SNV . 0 3 hm5C_associated_SNPs_26336 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:41111376-41111406
64251 chr11 988579 988579 1 + C T LUAD 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGTGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC < 41bp 1 0.735072725204172 1 0.563529133796692 experiment 0.529854549591656 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988579 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_26337 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:988569-988597
64251 chr7 2473357 2473357 1 + G T LUAD 2473368 + 2473348 2473388 41 GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA GGACCGGCATCTCCGCTTCCCCCCGAGCTACCGGAACAGGA < 41bp 1 0.311693339546238 1 0.128779768943787 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473368 chr7:2473357 nonsynonymous SNV 0.002 0 10 hm5C_associated_SNPs_26338 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chrX 48457261 48457261 1 + C A LUAD 48457256 + 48457236 48457276 41 GGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCCGAG GGGGGCAGCTGCTGGGCCAGCGCTAAGGGCCCCTCTCCGAG < 41bp 1 0.743694748159546 1 0.553169131278992 experiment 0.512610503680908 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457256 chrX:48457261 stopgain 1.000 1 26 hm5C_associated_SNPs_26342 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chrX 48457261 48457261 1 + C A LUAD 48457272 + 48457252 48457292 41 CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTG CCAGCGCTAAGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTG < 41bp 1 0.624391422269596 1 0.848430335521698 experiment 0.751217155460808 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457272 chrX:48457261 stopgain 1.000 1 10 hm5C_associated_SNPs_26343 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chrX 48457261 48457261 1 + C A LUAD 48457273 + 48457253 48457293 41 CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGC CAGCGCTAAGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGC < 41bp 1 0.629886698895888 1 0.341738969087601 experiment 0.740226602208223 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457273 chrX:48457261 stopgain 1.000 1 9 hm5C_associated_SNPs_26344 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chr7 2472403 2472403 1 + G A LUAD 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCACACACGGGGCCGCCGCTGCCCACGCCCGGGCCG < 41bp 1 0.482612533430477 1 0.154192358255386 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472403 synonymous SNV . 0 8 hm5C_associated_SNPs_26346 0 0 1 DDX3X POSTAR2 ENCODE chr7:2472401-2472441
64251 chr17 74078063 74078063 1 - C A LUAD 74078053 - 74078033 74078073 41 GGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCAGC GGCTGGGGCCTCTCTTGGCCCCAAGGTTGCCCCGGGCCAGC < 41bp 1 0.44628480957035 1 0.13056468963623 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078053 chr17:74078063 nonsynonymous SNV 0.006 2 11 hm5C_associated_SNPs_26347 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74078057-74078130
64251 chr17 74078063 74078063 1 - C A LUAD 74078054 - 74078034 74078074 41 GGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCAG GGGCTGGGGCCTCTCTTGGCCCCAAGGTTGCCCCGGGCCAG < 41bp 1 0.621586926934432 1 0.144018858671188 experiment 0.756826146131137 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078054 chr17:74078063 nonsynonymous SNV 0.006 2 12 hm5C_associated_SNPs_26348 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74078057-74078130
64251 chr17 74078063 74078063 1 - C A LUAD 74078055 - 74078035 74078075 41 TGGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCA TGGGCTGGGGCCTCTCTTGGCCCCAAGGTTGCCCCGGGCCA < 41bp 1 0.683736304754051 1 0.177568554878235 experiment 0.632527390491897 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078055 chr17:74078063 nonsynonymous SNV 0.006 2 13 hm5C_associated_SNPs_26349 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74078057-74078130
64251 chr17 74078063 74078063 1 - C A LUAD 74078064 - 74078044 74078084 41 TCTCGGGGCTGGGCTGGGGCCGCTCTTGGCCCCAAGGTTGC TCTCGGGGCTGGGCTGGGGCCTCTCTTGGCCCCAAGGTTGC < 41bp 1 0.506562586153756 1 0.144250422716141 experiment 0.986874827692489 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078064 chr17:74078063 nonsynonymous SNV 0.006 2 22 hm5C_associated_SNPs_26350 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74078057-74078130
64251 chr17 74078063 74078063 1 - C A LUAD 74078065 - 74078045 74078085 41 CTCTCGGGGCTGGGCTGGGGCCGCTCTTGGCCCCAAGGTTG CTCTCGGGGCTGGGCTGGGGCCTCTCTTGGCCCCAAGGTTG < 41bp 1 0.264122624343438 1 0.104539811611176 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078065 chr17:74078063 nonsynonymous SNV 0.006 2 23 hm5C_associated_SNPs_26351 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74078057-74078130
64251 chr5 34929952 34929952 1 + G C LUAD 34929944 + 34929924 34929964 41 GATGAAGTGTCACTATGAGGCGCTGGGGGTGCGGCGCGACG GATGAAGTGTCACTATGAGGCGCTGGGGCTGCGGCGCGACG < 41bp 1 0.722000617870123 1 0.384455859661102 experiment 0.555998764259753 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929944 chr5:34929952 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_26352 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr5 34929952 34929952 1 + G C LUAD 34929960 + 34929940 34929980 41 GAGGCGCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCT GAGGCGCTGGGGCTGCGGCGCGACGCCAGCGAGGAGGAGCT < 41bp 1 0.671508427213467 1 0.30105048418045 experiment 0.656983145573066 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929960 chr5:34929952 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_26353 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr5 34929952 34929952 1 + G C LUAD 34929965 + 34929945 34929985 41 GCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCTCAAGA GCTGGGGCTGCGGCGCGACGCCAGCGAGGAGGAGCTCAAGA < 41bp 1 0.613792571142353 1 0.554490208625793 experiment 0.772414857715295 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929965 chr5:34929952 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_26354 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34929937-34929961
64251 chr15 90771572 90771572 1 + C G LUAD 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TTGCTGTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA < 41bp 1 0.666539697463079 1 0.607730150222778 experiment 0.666920605073842 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771572 synonymous SNV . 0 6 hm5C_associated_SNPs_26355 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr1 145507688 145507688 1 + C T LUAD 145507671 + 145507651 145507691 41 CTCGATCGAAGGCGAGATGGCGGACGTGCTAGATCTTCACG CTCGATCGAAGGCGAGATGGCGGACGTGCTAGATCTTTACG < 41bp 1 0.247479538601207 1 0.250316202640533 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RBM8A ENSG00000131795 CDS Human other chr1:145507671 chr1:145507688 nonsynonymous SNV . 0 38 hm5C_associated_SNPs_26356 0 0 4 GRWD1 POSTAR2 ENCODE chr1:145507676-145507735
64251 chr7 114655761 114655761 1 + C T LUAD 114655752 + 114655732 114655772 41 GAAAATGAAGATTGTTGTGTCCACTGTATCCTGGCTTGCTT GAAAATGAAGATTGTTGTGTCCACTGTATTCTGGCTTGCTT < 41bp 1 0.16038528745748 1 0.0884399712085724 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655752 chr7:114655761 synonymous SNV . 0 30 hm5C_associated_SNPs_26357 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr7 114655761 114655761 1 + C T LUAD 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTATTCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG < 41bp 1 0.794049908323658 1 0.374408960342407 experiment 0.411900183352685 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655761 synonymous SNV . 0 6 hm5C_associated_SNPs_26358 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr9 37424918 37424918 1 + G T LUAD 37424932 + 37424912 37424952 41 GCCCACGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAA GCCCACTGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAA < 41bp 1 0.155403900971361 1 0.0620381534099579 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424932 chr9:37424918 nonsynonymous SNV 0.875 5 7 hm5C_associated_SNPs_26359 0 0 8 DDX24 POSTAR2 ENCODE chr9:37424835-37424927
64251 chr9 37424918 37424918 1 + G T LUAD 37424937 + 37424917 37424957 41 CGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGA CTGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGA < 41bp 1 0.191337962522643 1 0.681494295597076 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424937 chr9:37424918 nonsynonymous SNV 0.875 5 2 hm5C_associated_SNPs_26360 0 0 8 DDX24 POSTAR2 ENCODE chr9:37424835-37424927
64251 chr9 37424918 37424918 1 + G T LUAD 37424938 + 37424918 37424958 41 GGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGAT TGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGAT < 41bp 1 0.264671511728635 1 0.48793625831604 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424938 chr9:37424918 nonsynonymous SNV 0.875 5 1 hm5C_associated_SNPs_26361 0 0 8 DDX24 POSTAR2 ENCODE chr9:37424835-37424927
64251 chr3 142840050 142840050 1 + C G LUAD 142840040 + 142840020 142840060 41 ACCTCCGCACTCCTTACCGCCCTCCCGCTGCCGCCGTCGGG ACCTCCGCACTCCTTACCGCCCTCCCGCTGGCGCCGTCGGG < 41bp 1 0.0311806640721332 1 0.0426264107227325 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840040 chr3:142840050 nonsynonymous SNV 0.010 1 31 hm5C_associated_SNPs_26362 0 0 3 DHX30 POSTAR2 ENCODE chr3:142840032-142840073
64251 chr12 65564184 65564184 1 + G A LUAD 65564171 + 65564151 65564191 41 TCGGACTCAGAGGAAGAGGACGACGACGACGTGGCCTCCAG TCGGACTCAGAGGAAGAGGACGACGACGACGTGACCTCCAG < 41bp 1 0.641116032810361 1 0.46448826789856 experiment 0.717767934379278 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564171 chr12:65564184 nonsynonymous SNV 0.445 1 34 hm5C_associated_SNPs_26363 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:65564163-65564188
64251 chr5 82834300 82834300 1 + T C LUAD 82834308 + 82834288 82834328 41 CACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG CACTCTCCCACGCAGTCCTGCCTCTGTCTTTATGGAGCAGG < 41bp 1 0.0196106813962208 1 0.0387365520000458 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834308 chr5:82834300 synonymous SNV . 0 13 hm5C_associated_SNPs_26364 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:82834265-82834311
64251 chr11 67049199 67049199 1 + G C LUAD 67049189 + 67049169 67049209 41 AAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGTGCTG AAGCTCAGCTTCATCCTGGACCTCATGAACCGTGAGTGCTG < 41bp 1 0.163054723265475 1 0.0128652155399323 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67049189 chr11:67049199 nonsynonymous SNV 0.973 3 31 hm5C_associated_SNPs_26365 0 0 2 PRPF8 POSTAR2 ENCODE chr11:67049199-67049239
64251 chr16 2122317 2122317 1 + A T LUAD 2122321 + 2122301 2122341 41 TAAAGTGCTCATCTTTACTTCCCCTTGCAGTGTGGACCAGC TAAAGTGCTCATCTTTTCTTCCCCTTGCAGTGTGGACCAGC < 41bp 1 0.119428305258882 1 0.034792572259903 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2122321 chr16:2122317 nonsynonymous SNV 0.737 4 17 hm5C_associated_SNPs_26366 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2122300-2122320
64251 chr1 100757055 100757055 1 + C T LUAD 100757044 + 100757024 100757064 41 ATGCCAAGGAATTGGGATGACAAATCCAAATCTATAGAGTA ATGCCAAGGAATTGGGATGACAAATCCAAATTTATAGAGTA < 41bp 1 0.314991562304775 1 0.474586337804794 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100757044 chr1:100757055 synonymous SNV . 0 32 hm5C_associated_SNPs_26367 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:100757024-100757100
64251 chr9 135947049 135947049 1 + C A LUAD 135947032 + 135947012 135947052 41 ACTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGG ACTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCAGGG < 41bp 1 0.30508034614777 1 0.363571792840958 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947032 chr9:135947049 synonymous SNV . 0 38 hm5C_associated_SNPs_26369 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947049 135947049 1 + C A LUAD 135947033 + 135947013 135947053 41 CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGG CTCCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCAGGGG < 41bp 1 0.467386096631813 1 0.416590690612793 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947033 chr9:135947049 synonymous SNV . 0 37 hm5C_associated_SNPs_26370 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947049 135947049 1 + C A LUAD 135947035 + 135947015 135947055 41 CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCC CCGAGACCGCCCCCGTGCCGCCCACGGGTGACTCAGGGGCC < 41bp 1 0.228946205746936 1 0.146002024412155 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947035 chr9:135947049 synonymous SNV . 0 35 hm5C_associated_SNPs_26371 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947049 135947049 1 + C A LUAD 135947036 + 135947016 135947056 41 CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCCGGGGCCC CGAGACCGCCCCCGTGCCGCCCACGGGTGACTCAGGGGCCC < 41bp 1 0.46964472235815 1 0.20607802271843 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947036 chr9:135947049 synonymous SNV . 0 34 hm5C_associated_SNPs_26372 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr9 135947049 135947049 1 + C A LUAD 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCAGGGGCCCCCCCTGTGCC < 41bp 1 0.662598014069949 1 0.609946072101593 experiment 0.674803971860102 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947049 synonymous SNV . 0 24 hm5C_associated_SNPs_26373 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr11 4142904 4142904 1 + A C LUAD 4142908 + 4142888 4142928 41 TTCCTTGATTTAAAGAAGAACACAGGAAAGGAAGAGCAGCG TTCCTTGATTTAAAGACGAACACAGGAAAGGAAGAGCAGCG < 41bp 1 0.397189905481725 1 0.315557420253754 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142908 chr11:4142904 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_26374 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4142881-4142922
64251 chr11 4142904 4142904 1 + A C LUAD 4142924 + 4142904 4142944 41 AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC CGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC < 41bp 1 0.59015100169609 1 0.506074249744415 experiment 0.819697996607821 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142924 chr11:4142904 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_26375 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4142881-4142922
64251 chr12 109539761 109539761 1 + G C LUAD 109539764 + 109539744 109539784 41 GACCTAATCAAGCTCACGGGCTCTGCTTTAGTGTTCAAAGG GACCTAATCAAGCTCACCGGCTCTGCTTTAGTGTTCAAAGG < 41bp 1 0.303863763455736 1 0.385829716920853 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109539764 chr12:109539761 nonsynonymous SNV 0.935 5 18 hm5C_associated_SNPs_26376 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:109539706-109539776
64251 chr10 1054920 1054920 1 + A T LUAD 1054906 + 1054886 1054926 41 GGATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGAAGGAGT GGATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGTAGGAGT < 41bp 1 0.0512206347887779 1 0.0281098783016205 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1054906 chr10:1054920 nonsynonymous SNV 0.727 2 35 hm5C_associated_SNPs_26383 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:1054919-1054942
64251 chr10 1054920 1054920 1 + A T LUAD 1054907 + 1054887 1054927 41 GATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGAAGGAGTG GATCTTCTCAGGAGAGGCCCCCTTTCATCCCTGTAGGAGTG < 41bp 1 0.0257693646246066 1 0.18477138876915 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1054907 chr10:1054920 nonsynonymous SNV 0.727 2 34 hm5C_associated_SNPs_26384 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:1054919-1054942
64251 chr12 121001251 121001251 1 + G A LUAD 121001234 + 121001214 121001254 41 CTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAA CTTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAAGAA < 41bp 1 0.061817712515023 1 0.363543510437012 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001234 chr12:121001251 synonymous SNV . 0 38 hm5C_associated_SNPs_26395 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:121001228-121001264
64251 chr12 121001251 121001251 1 + G A LUAD 121001235 + 121001215 121001255 41 TTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAGGAAG TTCTAGACCTCTTGCTCTCCCTCTGGTAGAAGAGGAAGAAG < 41bp 1 0.479057505093092 1 0.516868233680725 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001235 chr12:121001251 synonymous SNV . 0 37 hm5C_associated_SNPs_26396 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:121001228-121001264
64251 chr19 40704286 40704286 1 + G T LUAD 40704290 + 40704270 40704310 41 CCCACCCCACAGTCCTGATCCTGGAGGCCATCGAGAACCAC CCCACCCCACAGTCCTTATCCTGGAGGCCATCGAGAACCAC < 41bp 1 0.788252343564797 1 0.715935230255127 experiment 0.423495312870406 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40704290 chr19:40704286 synonymous SNV . 0 17 hm5C_associated_SNPs_26408 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:40704256-40704286
64251 chr19 40704286 40704286 1 + G T LUAD 40704298 + 40704278 40704318 41 ACAGTCCTGATCCTGGAGGCCATCGAGAACCACAACCTCGC ACAGTCCTTATCCTGGAGGCCATCGAGAACCACAACCTCGC < 41bp 1 0.120401979497838 1 0.0595390498638153 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40704298 chr19:40704286 synonymous SNV . 0 9 hm5C_associated_SNPs_26409 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:40704256-40704286
64251 chr1 206653244 206653244 1 + A G LUAD 206653240 + 206653220 206653260 41 GGACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGCGG GGACGTCCCCAAGTTCGTCCCCAAGGTGGACCTGCAGGCGG < 41bp 1 0.305363579885795 1 0.317176580429077 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IKBKE ENSG00000143466 CDS Human other chr1:206653240 chr1:206653244 synonymous SNV . 0 25 hm5C_associated_SNPs_26410 0 0 2 PPIG POSTAR2 ENCODE chr1:206653233-206653278
64251 chrX 73046712 73046712 1 - C A LUAD 73046709 - 73046689 73046729 41 GGACAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC GGACAGGACACATGGAATGCCTAAGAACTGAGACTTGTGAC < 41bp 1 0.355574762855813 1 0.303103536367416 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046709 chrX:73046712 . . 0 18 hm5C_associated_SNPs_26411 0 0 88 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046712 73046712 1 - C A LUAD 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACCTGGGACAGGACACATGGAATGCCTAAGAACT < 41bp 1 0.202455826449751 1 0.0989247262477875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046712 . . 0 30 hm5C_associated_SNPs_26412 0 0 88 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046712 73046712 1 - C A LUAD 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACCTGGGACAGGACACATGGAATGCCTAA < 41bp 1 0.598057891619468 1 0.503252685070038 experiment 0.803884216761063 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046712 . . 0 35 hm5C_associated_SNPs_26413 0 0 88 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr11 65270747 65270747 1 + T A LUAD 65270750 + 65270730 65270770 41 TTCTTAAATATCAACCATGGCACTTTCTCCTGACCCCTTCC TTCTTAAATATCAACCAAGGCACTTTCTCCTGACCCCTTCC < 41bp 1 0.275293850082593 1 0.0458633601665497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270750 chr11:65270747 . . 0 18 hm5C_associated_SNPs_26414 0 0 89 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65270740-65270780
64251 chr11 65270747 65270747 1 + T A LUAD 65270752 + 65270732 65270772 41 CTTAAATATCAACCATGGCACTTTCTCCTGACCCCTTCCCT CTTAAATATCAACCAAGGCACTTTCTCCTGACCCCTTCCCT < 41bp 1 0.0673897465303113 1 0.027358740568161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270752 chr11:65270747 . . 0 16 hm5C_associated_SNPs_26415 0 0 89 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65270740-65270780
64251 chr9 106901507 106901507 1 + G T LUAD 106901519 + 106901499 106901539 41 CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGATT CTACAGTATCCAGATTTACTCAATGTCAAAATGGAAAGATT < 41bp 1 0.26288270738427 1 0.601303398609161 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106901519 chr9:106901507 nonsynonymous SNV 0.999 0 9 hm5C_associated_SNPs_26416 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:106901474-106901511
64251 chr2 54872432 54872432 1 + C T LUAD 54872413 + 54872393 54872433 41 AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCT AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCTT < 41bp 1 0.309648101495749 1 0.110696315765381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872413 chr2:54872432 synonymous SNV . 0 40 hm5C_associated_SNPs_26417 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr2 54872432 54872432 1 + C T LUAD 54872420 + 54872400 54872440 41 AGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAG AGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCTTGAGTCAG < 41bp 1 0.302649513058218 1 0.357260823249817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872420 chr2:54872432 synonymous SNV . 0 33 hm5C_associated_SNPs_26418 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr2 54872432 54872432 1 + C T LUAD 54872425 + 54872405 54872445 41 GAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAGGAAGG GAAGAGCTCCAAAGCCAAGCCCAGGCCTTGAGTCAGGAAGG < 41bp 1 0.187848006031811 1 0.439471960067749 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872425 chr2:54872432 synonymous SNV . 0 28 hm5C_associated_SNPs_26419 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr2 54872432 54872432 1 + C T LUAD 54872430 + 54872410 54872450 41 GCTCCAAAGCCAAGCCCAGGCCCTGAGTCAGGAAGGGAAGA GCTCCAAAGCCAAGCCCAGGCCTTGAGTCAGGAAGGGAAGA < 41bp 1 0.0306971342782898 1 0.0547321140766144 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872430 chr2:54872432 synonymous SNV . 0 23 hm5C_associated_SNPs_26420 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr4 79399131 79399131 1 + G C LUAD 79399112 + 79399092 79399132 41 GAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGGA GAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGCA < 41bp 1 0.0792669213277492 1 0.0852461755275726 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79399112 chr4:79399131 nonsynonymous SNV 0.490 3 40 hm5C_associated_SNPs_26421 0 0 1 GRWD1 POSTAR2 ENCODE chr4:79399114-79399137
64251 chr7 44801096 44801096 1 + G T LUAD 44801091 + 44801071 44801111 41 CGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAGCC CGGCTGACCTTCCCTGTGCGCGATGTGGTGGTCCTGGAGCC < 41bp 1 0.334786014092226 1 0.489540100097656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801091 chr7:44801096 nonsynonymous SNV 0.994 4 26 hm5C_associated_SNPs_26433 0 0 6 DDX24 POSTAR2 ENCODE chr7:44801047-44801117
64251 chr8 27288520 27288520 1 + G A LUAD 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGGCTTCGCCAACATCGACCAGGAGACCTACCACTGTGAA < 41bp 1 0.695988580485059 1 0.964615345001221 experiment 0.608022839029881 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288520 nonsynonymous SNV 0.994 3 34 hm5C_associated_SNPs_26434 0 0 3 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chrX 151869808 151869808 1 + G C LUAD 151869802 + 151869782 151869822 41 TTGCAGCTGGTCTTTGGCATCGAGCTGATGGAAGTGGACCC TTGCAGCTGGTCTTTGGCATCGAGCTCATGGAAGTGGACCC < 41bp 1 0.609202148360494 1 0.73699414730072 experiment 0.781595703279011 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869802 chrX:151869808 synonymous SNV . 0 27 hm5C_associated_SNPs_26435 0 0 2 LIN28B POSTAR2 ENCODE chrX:151869778-151869824
64251 chr16 1818265 1818265 1 + G A LUAD 1818253 + 1818233 1818273 41 CCCGTCCCGGGGGCATCATCCACGTGTATGGCGATGACAGC CCCGTCCCGGGGGCATCATCCACGTGTATGGCAATGACAGC < 41bp 1 0.51222784198018 1 0.746766686439514 experiment 0.97554431603964 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818253 chr16:1818265 nonsynonymous SNV 0.070 4 33 hm5C_associated_SNPs_26436 0 0 1 LSM11 POSTAR2 ENCODE chr16:1818263-1818325
64251 chr4 20568974 20568974 1 + G T LUAD 20568982 + 20568962 20569002 41 AGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGG AGTGATCCAGTTTACTTTTACCGATGCACCTGTCCATATGG < 41bp 1 0.0942549125546582 1 0.288368284702301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568982 chr4:20568974 nonsynonymous SNV 0.983 3 13 hm5C_associated_SNPs_26437 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr4 20568974 20568974 1 + G T LUAD 20568983 + 20568963 20569003 41 GTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGT GTGATCCAGTTTACTTTTACCGATGCACCTGTCCATATGGT < 41bp 1 0.110538360407393 1 0.432897984981537 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568983 chr4:20568974 nonsynonymous SNV 0.983 3 12 hm5C_associated_SNPs_26438 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr5 176083833 176083833 1 + C T LUAD 176083814 + 176083794 176083834 41 TTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCCA TTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCTA < 41bp 1 0.737756893165769 1 0.913835167884827 experiment 0.524486213668462 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176083814 chr5:176083833 nonsynonymous SNV 0.000 0 40 hm5C_associated_SNPs_26439 0 0 3 EFTUD2 POSTAR2 ENCODE chr5:176083815-176083920
64251 chr19 39899030 39899030 1 + C G LUAD 39899016 + 39898996 39899036 41 TCTCGCCCTCCAGCTCCCCACCACCACCTGGGGACCTTCCA TCTCGCCCTCCAGCTCCCCACCACCACCTGGGGAGCTTCCA < 41bp 1 0.106082373108361 1 0.087239146232605 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899016 chr19:39899030 nonsynonymous SNV 0.999 0 35 hm5C_associated_SNPs_26440 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39898982-39899077
64251 chr12 110765497 110765497 1 + G A LUAD 110765502 + 110765482 110765522 41 AACTAGATGAATTTGGGGAACAGCTTTCCAAAGTCATCTCC AACTAGATGAATTTGAGGAACAGCTTTCCAAAGTCATCTCC < 41bp 1 0.317391960456854 1 0.159823954105377 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110765502 chr12:110765497 nonsynonymous SNV 1.000 5 16 hm5C_associated_SNPs_26441 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110765398-110765647
64251 chr6 4935982 4935982 1 + G T LUAD 4935980 + 4935960 4936000 41 CTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATC CTTGTTATCCACAAAGTCCTCATAGAATAACTCACTAAATC < 41bp 1 0.32188207446431 1 0.716600179672241 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935980 chr6:4935982 stopgain 0.991 1 23 hm5C_associated_SNPs_26461 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:4935947-4936001
64251 chr12 104378659 104378659 1 + C A LUAD 104378675 + 104378655 104378695 41 CGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC CGTTAAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC < 41bp 1 0.249351820316319 1 0.0368557870388031 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TDG ENSG00000139372 CDS Human protein_coding chr12:104378675 chr12:104378659 nonsynonymous SNV 0.652 1 5 hm5C_associated_SNPs_26462 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104378650-104378669
64251 chr16 30990966 30990966 1 + G C LUAD 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCGGACGAGGCCCAGCGCCCTAGGCCCCTGCT < 41bp 1 0.106190182705342 1 0.4281986951828 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990966 nonsynonymous SNV 0.012 3 22 hm5C_associated_SNPs_26463 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:30990952-30990990
64251 chr10 93695417 93695417 1 + A G LUAD 93695421 + 93695401 93695441 41 TTTGTTATTTCAGGCTAGATCGCCTTTTTATTTTACTGGAT TTTGTTATTTCAGGCTGGATCGCCTTTTTATTTTACTGGAT < 41bp 1 0.411376534137435 1 0.281265377998352 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93695421 chr10:93695417 synonymous SNV . 0 17 hm5C_associated_SNPs_26465 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:93695414-93695441
64251 chr19 3525945 3525945 1 + C A LUAD 3525949 + 3525929 3525969 41 GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAG GGAGACCGCTTCATCCACTCCAGAGCCGGAGCCAACTGGAG < 41bp 1 0.420587285634105 1 0.72218245267868 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3525949 chr19:3525945 nonsynonymous SNV 0.689 4 17 hm5C_associated_SNPs_26466 0 0 3 GRWD1 POSTAR2 ENCODE chr19:3525913-3525999
64251 chr18 2656197 2656197 1 + G T LUAD 2656205 + 2656185 2656225 41 GTCCGAGCTCGGGGACCGGCCTCTGCAGGTCGGGGAGCGCT GTCCGAGCTCGGTGACCGGCCTCTGCAGGTCGGGGAGCGCT < 41bp 1 0.427769926473259 1 0.49423936009407 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2656205 chr18:2656197 synonymous SNV . 0 13 hm5C_associated_SNPs_26467 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:2656163-2656206
64251 chr2 233697651 233697651 1 + G T LUAD 233697652 + 233697632 233697672 41 GCTGCGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGG GCTGCGGATGGAAGAGGAGTCAGCCAGACTCCGGCATGAGG < 41bp 1 0.400512182629614 1 0.330240845680237 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233697652 chr2:233697651 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_26468 0 0 27 AGGF1 POSTAR2 ENCODE chr2:233697618-233697682
64251 chr2 233697651 233697651 1 + G T LUAD 233697656 + 233697636 233697676 41 CGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGGAAGA CGGATGGAAGAGGAGTCAGCCAGACTCCGGCATGAGGAAGA < 41bp 1 0.310612765552803 1 0.2479068338871 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233697656 chr2:233697651 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_26469 0 0 27 AGGF1 POSTAR2 ENCODE chr2:233697618-233697682
64251 chr14 24114504 24114504 1 + G T LUAD 24114501 + 24114481 24114521 41 CGTAGCTGTGGTCCCAGGCCCAGGAGCCTGAGGGGGTGTCT CGTAGCTGTGGTCCCAGGCCCAGTAGCCTGAGGGGGTGTCT < 41bp 1 0.760023134718047 1 0.383801519870758 experiment 0.479953730563907 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114501 chr14:24114504 nonsynonymous SNV 0.017 3 24 hm5C_associated_SNPs_26471 0 0 16 DDX55 POSTAR2 ENCODE chr14:24114440-24114517
64251 chr4 76711338 76711338 1 + C G LUAD 76711339 + 76711319 76711359 41 CAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTACTTT CAGAAGTTATTCGAGGCTGGCAAGTAAACCAAGACTACTTT < 41bp 1 0.398365334203002 1 0.371402442455292 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76711339 chr4:76711338 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_26473 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:76711305-76711339
64251 chr11 71209481 71209481 1 + C T LUAD 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GCGTACCACGCTGAGAACTACAGCCCTGAGGACAACAGGTT < 41bp 1 0.162273782788571 1 0.163086414337158 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209481 synonymous SNV . 0 12 hm5C_associated_SNPs_26476 0 0 3 DDX24 POSTAR2 ENCODE chr11:71209479-71209575
64251 chr3 33879712 33879712 1 + G C LUAD 33879698 + 33879678 33879718 41 TTCTCTTCCTAATTTTAGATCTGTTTGAGAAGATGGTTCCC TTCTCTTCCTAATTTTAGATCTGTTTGAGAAGATCGTTCCC < 41bp 1 0.129843089605041 1 0.0693377256393433 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33879698 chr3:33879712 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_26483 0 0 5 DDX24 POSTAR2 ENCODE chr3:33879695-33879755
64251 chr2 109347872 109347872 1 + A G LUAD 109347873 + 109347853 109347893 41 ACTGATGGAAGAGCAAAATACTGGCTTGAAAGAGCAGCCAA ACTGATGGAAGAGCAAAATGCTGGCTTGAAAGAGCAGCCAA < 41bp 1 0.636910494561734 1 0.345612943172455 experiment 0.726179010876532 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347873 chr2:109347872 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_26485 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:109347860-109347880
64251 chr2 109347872 109347872 1 + A G LUAD 109347887 + 109347867 109347907 41 AAAATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAA AAAATGCTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAA < 41bp 1 0.210582105898099 1 0.549694418907166 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347887 chr2:109347872 nonsynonymous SNV 0.997 3 6 hm5C_associated_SNPs_26486 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:109347860-109347880
64251 chr2 109347872 109347872 1 + A G LUAD 109347890 + 109347870 109347910 41 ATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTC ATGCTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTC < 41bp 1 0.0842184629058168 1 0.234037607908249 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347890 chr2:109347872 nonsynonymous SNV 0.997 3 3 hm5C_associated_SNPs_26487 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:109347860-109347880
64251 chrX 123229240 123229240 1 + C T LUAD 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGATGAGAGAGAACAGAACTGAAGCCTGATTTCT < 41bp 1 0.48715098528096 1 0.476609528064728 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229240 stopgain 0.996 1 11 hm5C_associated_SNPs_26501 0 0 12 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chrX 103411551 103411551 1 + G C LUAD 103411562 + 103411542 103411582 41 CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG CCTCCTCGCCGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG < 41bp 1 0.782142859003261 1 0.240818560123444 experiment 0.435714281993477 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411562 chrX:103411551 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_26502 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103411536-103411574
64251 chr7 56129515 56129515 1 + C G LUAD 56129510 + 56129490 56129530 41 TCAAGCAGAACATTCAGAATCAGGTCAGCTTGTGGGTGTGG TCAAGCAGAACATTCAGAATCAGGTGAGCTTGTGGGTGTGG < 41bp 1 0.707426429571582 1 0.630493104457855 experiment 0.585147140856836 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56129510 chr7:56129515 nonsynonymous SNV 0.991 1 26 hm5C_associated_SNPs_26503 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:56129446-56129518
64251 chr17 43311087 43311087 1 + G C LUAD 43311084 + 43311064 43311104 41 CTCGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACGTAAGC CTCGAGTACCTGGCCTTTGCCCACTGCTCTGTCACGTAAGC < 41bp 1 0.137364219480612 1 0.328509449958801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43311084 chr17:43311087 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_26504 0 0 1 DDX24 POSTAR2 ENCODE chr17:43311012-43311100
64251 chr13 48941720 48941720 1 + C T LUAD 48941724 + 48941704 48941744 41 TCATGATAAAACTCTTCAGACTGATTCTATAGACAGGTATT TCATGATAAAACTCTTTAGACTGATTCTATAGACAGGTATT < 41bp 1 0.209498142984453 1 0.0518398582935333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48941724 chr13:48941720 stopgain 1.000 0 17 hm5C_associated_SNPs_26505 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr13:48941669-48941723
64251 chr7 100732051 100732051 1 + C G LUAD 100732032 + 100732012 100732052 41 GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGGC < 41bp 1 0.270796839818772 1 0.334219813346863 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732032 chr7:100732051 synonymous SNV . 0 40 hm5C_associated_SNPs_26506 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100732007-100732076
64251 chr1 218520046 218520046 1 + G A LUAD 218520059 + 218520039 218520079 41 AAAAAATGCACTACTGTGTGCTGAGCGCTTTTCTGATCCTG AAAAAATACACTACTGTGTGCTGAGCGCTTTTCTGATCCTG < 41bp 1 0.149604838383354 1 0.0755462348461151 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFB2 ENSG00000092969 CDS Human protein_coding chr1:218520059 chr1:218520046 nonsynonymous SNV 0.996 4 8 hm5C_associated_SNPs_26507 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr1:218520027-218520048
64251 chr21 45736381 45736381 1 + A T LUAD 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGGGGAGGGTCGCCCTCTGCCTTCGACCGGA < 41bp 1 0.45573141298118 1 0.291431844234467 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736381 nonsynonymous SNV 0.454 1 20 hm5C_associated_SNPs_26508 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:45736380-45736381
64251 chr21 45736381 45736381 1 + A T LUAD 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGGGGAGGGTCGCCCTCTGCCTTCGACCGGATC < 41bp 1 0.0824087433283363 1 0.179296791553497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736381 nonsynonymous SNV 0.454 1 18 hm5C_associated_SNPs_26509 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:45736380-45736381
64251 chr21 45736381 45736381 1 + A T LUAD 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGGGGAGGGTCGCCCTCTGCCTTCGACCGGATCC < 41bp 1 0.0945408498300253 1 0.0797519385814667 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736381 nonsynonymous SNV 0.454 1 17 hm5C_associated_SNPs_26510 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:45736380-45736381
64251 chr21 45736381 45736381 1 + A T LUAD 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGGGGAGGGTCGCCCTCTGCCTTCGACCGGATCCT < 41bp 1 0.391490995512808 1 0.453803807497025 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736381 nonsynonymous SNV 0.454 1 16 hm5C_associated_SNPs_26511 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:45736380-45736381
64251 chr10 3155606 3155606 1 + G C LUAD 3155619 + 3155599 3155639 41 ACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC ACCCGCGCCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC < 41bp 1 0.655468151270206 1 0.766318678855896 experiment 0.689063697459588 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3155619 chr10:3155606 nonsynonymous SNV 0.003 3 8 hm5C_associated_SNPs_26515 0 0 4 DDX24 POSTAR2 ENCODE chr10:3155563-3155607
64251 chr21 47831287 47831287 1 + A T LUAD 47831301 + 47831281 47831321 41 ACAGTCAGGCTGGCAGTCTGCAGAGCGAGCTGCTCTGCTCC ACAGTCTGGCTGGCAGTCTGCAGAGCGAGCTGCTCTGCTCC < 41bp 1 0.417198562489002 1 0.873905301094055 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831301 chr21:47831287 nonsynonymous SNV 0.000 1 7 hm5C_associated_SNPs_26516 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:47831255-47831289
64251 chr17 57644041 57644041 1 + C G LUAD 57644036 + 57644016 57644056 41 AGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA AGGAACTACTCCAACTTTTCCTATTGAGAAACAAAGAAAAA < 41bp 1 0.155932237173101 1 0.128962606191635 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX40 ENSG00000108406 CDS Human protein_coding chr17:57644036 chr17:57644041 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_26517 0 0 12 EWSR1 POSTAR2 SRX029343 chr17:57644018-57644043
64251 chr11 62545512 62545512 1 + C G LUAD 62545497 + 62545477 62545517 41 GCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTT GCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTGTACTT < 41bp 1 0.745156082628384 1 0.737807393074036 experiment 0.509687834743231 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62545497 chr11:62545512 synonymous SNV . 0 36 hm5C_associated_SNPs_26519 0 0 1 PPIG POSTAR2 ENCODE chr11:62545473-62545512
64251 chr3 50005951 50005951 1 + C G LUAD 50005946 + 50005926 50005966 41 CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGT CTTTCAGAACAGCCAAAGTCCAGTTGAAGACCAAGATAAGT < 41bp 1 0.127133325791524 1 0.365459352731705 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005946 chr3:50005951 nonsynonymous SNV 0.979 1 26 hm5C_associated_SNPs_26520 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50005759-50005956
64251 chr11 71946167 71946167 1 + C G LUAD 71946183 + 71946163 71946203 41 AAACCAATTCTGGCTGATATCGAGTACCTGCAGGACCAGCA AAACGAATTCTGGCTGATATCGAGTACCTGCAGGACCAGCA < 41bp 1 0.651027329448511 1 0.831960439682007 experiment 0.697945341102978 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946183 chr11:71946167 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_26524 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:71946160-71946180
64251 chr14 90437534 90437534 1 + G T LUAD 90437526 + 90437506 90437546 41 GCTCTCTTTTTAGGAAGAAGCCAATCCTGCTTGTGCATGGT GCTCTCTTTTTAGGAAGAAGCCAATCCTTCTTGTGCATGGT < 41bp 1 0.057596082320162 1 0.111792951822281 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90437526 chr14:90437534 synonymous SNV . 0 29 hm5C_associated_SNPs_26534 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr14:90437519-90437545
64251 chr20 62374330 62374330 1 + G T LUAD 62374321 + 62374301 62374341 41 AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT AGCCTGCCGCTGGAAGAAAGCCTGCCAGCTGTTCCTGGACT < 41bp 1 0.130509782543558 1 0.189883172512054 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374321 chr20:62374330 nonsynonymous SNV 0.984 3 30 hm5C_associated_SNPs_26535 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:62374318-62374357
64251 chr8 143782017 143782017 1 + A T LUAD 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACCTGACTGCGAGTCAACGAGATCCAGAGGACTCC < 41bp 1 0.70117539508762 1 0.224282652139664 experiment 0.59764920982476 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782017 nonsynonymous SNV 0.188 1 20 hm5C_associated_SNPs_26536 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chr17 57728627 57728627 1 + G A LUAD 57728643 + 57728623 57728663 41 AGTGGATGTCTTCTTTCCTCCAGAAGCACAAAATGATTTTC AGTGAATGTCTTCTTTCCTCCAGAAGCACAAAATGATTTTC < 41bp 1 0.491769316598084 1 0.740119934082031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57728643 chr17:57728627 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_26537 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:57728612-57728638
64251 chr1 16261133 16261133 1 + G C LUAD 16261121 + 16261101 16261141 41 CCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA CCATGCCTGTGATCGACGATCGTCCGGCAGACCCGGGCTCA < 41bp 1 0.176648926292124 1 0.255035281181335 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261121 chr1:16261133 nonsynonymous SNV 0.002 1 33 hm5C_associated_SNPs_26538 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:16261060-16261160
64251 chr7 100732027 100732027 1 + G C LUAD 100732032 + 100732012 100732052 41 GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC GCCCAGCCCAGCCCTCGGGCCGAATCTGGACGGCTCTGGCC < 41bp 1 0.227132077879564 1 0.142116397619247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732032 chr7:100732027 synonymous SNV . 0 16 hm5C_associated_SNPs_26543 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731995-100732033
64251 chr1 161751777 161751777 1 + C T LUAD 161751776 + 161751756 161751796 41 GACATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA GACATTTGGGACATCAACAACTAAATCTGTACAGGTAATTA < 41bp 1 0.35391538720338 1 0.262138694524765 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751776 chr1:161751777 stopgain 0.854 0 22 hm5C_associated_SNPs_26544 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:161751765-161751788
64251 chr1 12061527 12061527 1 + C T LUAD 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCTAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA < 41bp 1 0.265180094551695 1 0.083954930305481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061527 stopgain 0.943 1 4 hm5C_associated_SNPs_26554 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:12061512-12061527
64251 chr2 98263846 98263846 1 + A T LUAD 98263858 + 98263838 98263878 41 CTTCAGGCACCAGGGAAGACCCTAATTTAGTCCCCTCCATC CTTCAGGCTCCAGGGAAGACCCTAATTTAGTCCCCTCCATC < 41bp 1 0.328903541347873 1 0.0337239801883698 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263858 chr2:98263846 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_26555 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:98263811-98263861
64251 chr1 218458660 218458660 1 + T C LUAD 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAACGGCAGCCGCCGCTCCGGACTCACGTG < 41bp 1 0.335199722043407 1 0.216748684644699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458660 nonsynonymous SNV 0.053 3 15 hm5C_associated_SNPs_26556 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:218458640-218458660
64251 chr12 6635486 6635486 1 + C T LUAD 6635482 + 6635462 6635502 41 GGCAAACGTCACCCCCCCTTCCGGCTGCCTCAGGAACACAG GGCAAACGTCACCCCCCCTTCCGGTTGCCTCAGGAACACAG < 41bp 1 0.399824476176789 1 0.47621613740921 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6635482 chr12:6635486 synonymous SNV . 0 25 hm5C_associated_SNPs_26557 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:6635466-6635495
64251 chr19 1434826 1434826 1 + G T LUAD 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGTGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG < 41bp 1 0.282393828816495 1 0.117927610874176 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434826 nonsynonymous SNV 0.960 1 11 hm5C_associated_SNPs_26558 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434826 1434826 1 + G T LUAD 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGTGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC < 41bp 1 0.357945158792271 1 0.105299979448318 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434826 nonsynonymous SNV 0.960 1 10 hm5C_associated_SNPs_26559 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434826 1434826 1 + G T LUAD 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGTGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT < 41bp 1 0.455051863275202 1 0.437694728374481 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434826 nonsynonymous SNV 0.960 1 9 hm5C_associated_SNPs_26560 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434826 1434826 1 + G T LUAD 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGTGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT < 41bp 1 0.72026673347601 1 0.139312982559204 experiment 0.55946653304798 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434826 nonsynonymous SNV 0.960 1 8 hm5C_associated_SNPs_26561 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 39948326 39948326 1 + G C LUAD 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATCAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA < 41bp 1 0.272523606517295 1 0.156036287546158 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948326 nonsynonymous SNV 0.986 3 4 hm5C_associated_SNPs_26562 0 0 36 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948326 39948326 1 + G C LUAD 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATCAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG < 41bp 1 0.527111049441185 1 0.310155034065247 experiment 0.94577790111763 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948326 nonsynonymous SNV 0.986 3 3 hm5C_associated_SNPs_26563 0 0 36 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr5 179143205 179143205 1 + G A LUAD 179143220 + 179143200 179143240 41 TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGG TTCACATGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGG < 41bp 1 0.790210364702062 1 0.760367631912231 experiment 0.419579270595876 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179143220 chr5:179143205 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_26565 0 0 53 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179143107-179143246
64251 chr16 57243045 57243045 1 + A T LUAD 57243043 + 57243023 57243063 41 GAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATA GAGTTATTCCACTGGAAGATCCTCTGGGACCAGCTGTTATA < 41bp 1 0.0712323257144311 1 0.0638763010501862 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57243043 chr16:57243045 synonymous SNV . 0 23 hm5C_associated_SNPs_26566 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:57243040-57243058
64251 chr12 31236900 31236900 1 + G A LUAD 31236904 + 31236884 31236924 41 GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG GTCTTCTTCCTGCGAAAGGGCTGCAGGCACCCCGAGGCCTG < 41bp 1 0.746286281117892 1 0.223526269197464 experiment 0.507427437764215 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX11 ENSG00000013573;ENSG00000013573 exonic;splicing Human other chr12:31236904 chr12:31236900 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_26567 0 0 4 GRWD1 POSTAR2 ENCODE chr12:31236877-31236930
64251 chr8 145150923 145150923 1 + A T LUAD 145150914 + 145150894 145150934 41 GTCTCACCGTGGCCTCCTCTCTTCCTTGGACCACACCAGGT GTCTCACCGTGGCCTCCTCTCTTCCTTGGTCCACACCAGGT < 41bp 1 0.313712716929657 1 0.167755424976349 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150914 chr8:145150923 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_26568 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:145150894-145150931
64251 chr17 17698452 17698452 1 + G T LUAD 17698433 + 17698413 17698453 41 TGCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCGG TGCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCTG < 41bp 1 0.383311200986562 1 0.231514096260071 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698433 chr17:17698452 synonymous SNV . 0 40 hm5C_associated_SNPs_26569 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:17698435-17698468
64251 chrX 118112367 118112367 1 + C A LUAD 118112379 + 118112359 118112399 41 TGGAGTCTCATGAGAATGCACTGCATGATGCAGAAATAGCA TGGAGTCTAATGAGAATGCACTGCATGATGCAGAAATAGCA < 41bp 1 0.491790852305217 1 0.112191468477249 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118112379 chrX:118112367 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_26570 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:118112354-118112383
64251 chr19 8320499 8320499 1 + G A LUAD 8320515 + 8320495 8320535 41 AGCTGTCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAG AGCTATCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAG < 41bp 1 0.553412616885079 1 0.499053388834 experiment 0.893174766229842 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CERS4 ENSG00000090661 CDS Human protein_coding chr19:8320515 chr19:8320499 synonymous SNV . 0 5 hm5C_associated_SNPs_26571 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:8320470-8320523
64251 chr10 96333850 96333850 1 + A G LUAD 96333846 + 96333826 96333866 41 AATTCTTTTTTGACCCAGTCCGGAAGTGTAATGGTCAGCCA AATTCTTTTTTGACCCAGTCCGGAGGTGTAATGGTCAGCCA < 41bp 1 0.728141778695097 1 0.821302473545074 experiment 0.543716442609806 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HELLS ENSG00000119969 CDS Human protein_coding chr10:96333846 chr10:96333850 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_26572 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr10:96333771-96333851
64251 chr20 5958578 5958578 1 + C T LUAD 5958574 + 5958554 5958594 41 TGTTTGTGGTAACACCACGACCACCTCTGGTCTGACGGTAA TGTTTGTGGTAACACCACGACCACTTCTGGTCTGACGGTAA < 41bp 1 0.1290361399391 1 0.296220630407333 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCM8 ENSG00000125885 CDS Human protein_coding chr20:5958574 chr20:5958578 synonymous SNV . 0 25 hm5C_associated_SNPs_26574 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:5958557-5958587
64251 chr7 55259441 55259441 1 + G T LUAD 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCTTTGTGCACCGCGA < 41bp 1 0.0695586641786592 1 0.189282596111298 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259441 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_26576 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr16 22237269 22237269 1 + G T LUAD 22237252 + 22237232 22237272 41 GCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGGTCC GCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGTTCC < 41bp 1 0.382923369297669 1 0.547179043292999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22237252 chr16:22237269 synonymous SNV . 0 38 hm5C_associated_SNPs_26577 0 0 1 PRPF8 POSTAR2 ENCODE chr16:22237255-22237330
64251 chr14 61346468 61346468 1 + G C LUAD 61346465 + 61346445 61346485 41 CACTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA CACTGGCACCTATTCACAAGCTTCAAGAAGCTCTGTATGAA < 41bp 1 0.481213785125799 1 0.56866842508316 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346465 chr14:61346468 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_26579 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:61346457-61346482
64251 chr12 6969609 6969609 1 + A T LUAD 6969628 + 6969608 6969648 41 CAGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACAT CTGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACAT < 41bp 1 0.245665953328216 1 0.0575905442237854 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969628 chr12:6969609 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_26580 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:6969576-6969610
64251 chr13 31903674 31903674 1 + C T LUAD 31903694 + 31903674 31903714 41 CATCAAGTTCCCATATCGTTCCACAAACACTGGAACATCGA TATCAAGTTCCCATATCGTTCCACAAACACTGGAACATCGA < 41bp 1 0.389824200124032 1 0.143104761838913 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31903694 chr13:31903674 nonsynonymous SNV 0.989 3 1 hm5C_associated_SNPs_26584 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr13:31903650-31903682
64251 chr2 197541345 197541345 1 + G C LUAD 197541357 + 197541337 197541377 41 GAACAGCTGTGCAAAAAGAGCTGCTAGAATCAACTATTGCA GAACAGCTCTGCAAAAAGAGCTGCTAGAATCAACTATTGCA < 41bp 1 0.236060001583348 1 0.0744020342826843 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197541357 chr2:197541345 nonsynonymous SNV 0.009 0 9 hm5C_associated_SNPs_26586 0 0 1 DDX24 POSTAR2 ENCODE chr2:197541321-197541456
64251 chr14 101419737 101419737 1 + C T LUAD 101419734 + 101419714 101419754 41 TGAGTCATGGACGATGAATACTACGTGTCTGAAACTCTGAG TGAGTCATGGACGATGAATACTATGTGTCTGAAACTCTGAG < 41bp 1 0.362606648435354 1 0.044477105140686 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419734 chr14:101419737 . . 0 24 hm5C_associated_SNPs_26602 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101419720-101419740
64251 chr14 101419737 101419737 1 + C T LUAD 101419742 + 101419722 101419762 41 GGACGATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA GGACGATGAATACTATGTGTCTGAAACTCTGAGGTCCAACA < 41bp 1 0.571416244702617 1 0.0946499705314636 experiment 0.857167510594766 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419742 chr14:101419737 . . 0 16 hm5C_associated_SNPs_26603 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101419720-101419740
64251 chr14 101419737 101419737 1 + C T LUAD 101419748 + 101419728 101419768 41 TGAATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAAC TGAATACTATGTGTCTGAAACTCTGAGGTCCAACAGAAAAC < 41bp 1 0.340240485525851 1 0.193256169557571 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419748 chr14:101419737 . . 0 10 hm5C_associated_SNPs_26604 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101419720-101419740
64251 chr14 101419737 101419737 1 + C T LUAD 101419750 + 101419730 101419770 41 AATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAACAT AATACTATGTGTCTGAAACTCTGAGGTCCAACAGAAAACAT < 41bp 1 0.765016810400478 1 0.749192595481873 experiment 0.469966379199044 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419750 chr14:101419737 . . 0 8 hm5C_associated_SNPs_26605 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:101419720-101419740
64251 chr12 58109729 58109729 1 + A G LUAD 58109718 + 58109698 58109738 41 CTGTCACCCTTCCCTACAGCCTGAGGAGTACATGGCCTACG CTGTCACCCTTCCCTACAGCCTGAGGAGTACGTGGCCTACG < 41bp 1 0.71646989165987 1 0.343274474143982 experiment 0.567060216680259 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109718 chr12:58109729 nonsynonymous SNV 0.976 0 32 hm5C_associated_SNPs_26606 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:58109720-58109740
64251 chr7 4824630 4824630 1 + G A LUAD 4824610 + 4824590 4824630 41 CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGA < 41bp 1 0.170089603306863 1 0.189379930496216 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824610 chr7:4824630 synonymous SNV . 0 41 hm5C_associated_SNPs_26607 0 0 2 PPIG POSTAR2 ENCODE chr7:4824549-4824631
64251 chr10 1170222 1170222 1 + G T LUAD 1170216 + 1170196 1170236 41 TGGTTTCAGGCAGCGATGACCGCACGGTGAAAGTCTGGGAC TGGTTTCAGGCAGCGATGACCGCACGTTGAAAGTCTGGGAC < 41bp 1 0.425739825421344 1 0.435390830039978 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR37 ENSG00000047056 CDS Human protein_coding chr10:1170216 chr10:1170222 nonsynonymous SNV 0.998 4 27 hm5C_associated_SNPs_26609 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:1170211-1170234
64251 chr6 36442578 36442578 1 + A C LUAD 36442596 + 36442576 36442616 41 TGACTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA TGCCTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA < 41bp 1 0.178472986578394 1 0.408287703990936 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36442596 chr6:36442578 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_26612 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:36442575-36442613
64251 chr13 48828025 48828025 1 + G T LUAD 48828044 + 48828024 48828064 41 AGGTGTTATTCTAGGAGGAGCATACTTGTACAAATATTTTG ATGTGTTATTCTAGGAGGAGCATACTTGTACAAATATTTTG < 41bp 1 0.0884166972952473 1 0.117158114910126 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITM2B ENSG00000136156 CDS Human protein_coding chr13:48828044 chr13:48828025 nonsynonymous SNV 0.947 3 2 hm5C_associated_SNPs_26614 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:48827951-48828050
64251 chr5 153783750 153783750 1 + G T LUAD 153783741 + 153783721 153783761 41 TACAGGAAGTATGTGCCCTACAAGGTCCCGGCCGGAGTCAG TACAGGAAGTATGTGCCCTACAAGGTCCCTGCCGGAGTCAG < 41bp 1 0.613211107067931 1 0.168331831693649 experiment 0.773577785864137 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153783741 chr5:153783750 synonymous SNV . 0 30 hm5C_associated_SNPs_26615 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:153783733-153783761
64251 chr17 18167939 18167939 1 + T G LUAD 18167953 + 18167933 18167973 41 TGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TGCTCAGCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC < 41bp 1 0.677281923558503 1 0.930401980876923 experiment 0.645436152882994 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167953 chr17:18167939 nonsynonymous SNV 0.033 1 7 hm5C_associated_SNPs_26616 0 0 2 RBM15 POSTAR2 ENCODE chr17:18167917-18167948
64251 chr17 37070638 37070638 1 + G C LUAD 37070657 + 37070637 37070677 41 GGAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC GCAGCCAGAGCGTCGGGATTCACAGGACGGCAGCAGCTACC < 41bp 1 0.79162927616179 1 0.21314737200737 experiment 0.416741447676419 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070657 chr17:37070638 nonsynonymous SNV 0.726 0 2 hm5C_associated_SNPs_26617 0 0 6 GRWD1 POSTAR2 ENCODE chr17:37070577-37070658
64251 chr16 56716476 56716476 1 + G A LUAD 56716470 + 56716450 56716490 41 GAAATGGACCCCAACTGCTCCTGCTCGCCTGGTAAGGGACA GAAATGGACCCCAACTGCTCCTGCTCACCTGGTAAGGGACA < 41bp 1 0.219770260679584 1 0.181626915931702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MT1X ENSG00000187193 CDS Human protein_coding chr16:56716470 chr16:56716476 synonymous SNV . 0 27 hm5C_associated_SNPs_26618 0 0 13 DDX3X POSTAR2 ENCODE chr16:56716389-56716482
64251 chr2 171818224 171818224 1 + C G LUAD 171818210 + 171818190 171818230 41 TTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCC TTATTGCCACCACAAGTAAACCAGTCCCTCACTTGTGTGCC < 41bp 1 0.206423917692833 1 0.101730972528458 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818210 chr2:171818224 nonsynonymous SNV 0.998 3 35 hm5C_associated_SNPs_26619 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:171818205-171818225
64251 chr16 599442 599442 1 + G A LUAD 599450 + 599430 599470 41 ATGCTGCCCTGTGATGAGGCCGGCTGCCTCCTCTTCTCACA ATGCTGCCCTGTAATGAGGCCGGCTGCCTCCTCTTCTCACA < 41bp 1 0.258310099166434 1 0.148414731025696 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:599450 chr16:599442 nonsynonymous SNV 0.789 4 13 hm5C_associated_SNPs_26620 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:599427-599445
64251 chr1 16785432 16785432 1 + C T LUAD 16785430 + 16785410 16785450 41 GACTTCTGGGAAGGCGCTCCCTCATCTGGGCCAAAGGAAGG GACTTCTGGGAAGGCGCTCCCTTATCTGGGCCAAAGGAAGG < 41bp 1 0.290674178231323 1 0.0513639748096466 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16785430 chr1:16785432 nonsynonymous SNV 0.083 1 23 hm5C_associated_SNPs_26621 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:16785425-16785463
64251 chr8 17406315 17406315 1 + A G LUAD 17406301 + 17406281 17406321 41 GTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAG GTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTGGTGAAG < 41bp 1 0.209283026889157 1 0.133090198040009 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17406301 chr8:17406315 nonsynonymous SNV 0.998 3 35 hm5C_associated_SNPs_26622 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:17406292-17406323
64251 chr2 128178938 128178938 1 + C T LUAD 128178922 + 128178902 128178942 41 GATCCGCAAACGTGCCAACTCCTTCCTGGAGGAGCTCCGTC GATCCGCAAACGTGCCAACTCCTTCCTGGAGGAGCTTCGTC < 41bp 1 0.051195368831837 1 0.0683390498161316 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128178922 chr2:128178938 nonsynonymous SNV . 0 37 hm5C_associated_SNPs_26625 0 0 2 GRWD1 POSTAR2 ENCODE chr2:128178930-128178965
64251 chr8 17406291 17406291 1 + G A LUAD 17406301 + 17406281 17406321 41 GTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAG GTTTGTGAAAAGAAATGTGGCAAACTGGAAGATTAGTGAAG < 41bp 1 0.167606645288205 1 0.102503210306168 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17406301 chr8:17406291 nonsynonymous SNV 1.000 5 11 hm5C_associated_SNPs_26627 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:17406285-17406312
64251 chr10 105203041 105203041 1 + A T LUAD 105203022 + 105203002 105203042 41 AGGTCTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCAAA AGGTCTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCATA < 41bp 1 0.269485688775103 1 0.825788736343384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203022 chr10:105203041 nonsynonymous SNV 0.970 3 40 hm5C_associated_SNPs_26629 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:105203027-105203065
64251 chr3 196533538 196533538 1 + G T LUAD 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCCGTTATTGCCCCGCTACCGGATCATACGAA < 41bp 1 0.434258432844148 1 0.525960206985474 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533538 nonsynonymous SNV 0.986 3 26 hm5C_associated_SNPs_26631 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:196533507-196533538
64251 chr9 15444672 15444672 1 + G A LUAD 15444686 + 15444666 15444706 41 CTATCTGTGAATATCTTGTACCCTGTTATATTTCATAAGGT CTATCTATGAATATCTTGTACCCTGTTATATTTCATAAGGT < 41bp 1 0.0978050011959939 1 0.047975480556488 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15444686 chr9:15444672 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_26632 0 0 4 BUD13 POSTAR2 ENCODE chr9:15444569-15444674
64251 chr5 169018131 169018131 1 + G A LUAD 169018123 + 169018103 169018143 41 CGAATGTTAGAAAGTTTGAGCTGCGAATGTGAAGCTATTAA CGAATGTTAGAAAGTTTGAGCTGCGAATATGAAGCTATTAA < 41bp 1 0.416861660159583 1 0.120415240526199 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018123 chr5:169018131 nonsynonymous SNV 0.995 1 29 hm5C_associated_SNPs_26633 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:169018064-169018150
64251 chr10 75519922 75519922 1 + G T LUAD 75519908 + 75519888 75519928 41 GATCCAGACTCCCCAGCGATCTGCCCCATCACAGGCCTCCA GATCCAGACTCCCCAGCGATCTGCCCCATCACAGTCCTCCA < 41bp 1 0.452696287252437 1 0.469302088022232 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519908 chr10:75519922 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_26634 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75519919-75519957
64251 chr5 137754725 137754725 1 + A G LUAD 137754741 + 137754721 137754761 41 CTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGAC CTCCGGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGAC < 41bp 1 0.485765381045597 1 0.18029910326004 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137754741 chr5:137754725 synonymous SNV . 0 5 hm5C_associated_SNPs_26635 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137754724-137754754
64251 chr5 82834807 82834807 1 + C A LUAD 82834788 + 82834768 82834808 41 CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGAA < 41bp 1 0.0687178017894855 1 0.116916120052338 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834788 chr5:82834807 nonsynonymous SNV 0.201 2 40 hm5C_associated_SNPs_26636 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:82834799-82834837
64251 chr6 26597220 26597220 1 + G T LUAD 26597203 + 26597183 26597223 41 GGCCGTCGTGCCGCTCGTGTCAGTCAACATGGAGGCAGAGG GGCCGTCGTGCCGCTCGTGTCAGTCAACATGGAGGCATAGG < 41bp 1 0.362998437091729 1 0.153044879436493 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597203 chr6:26597220 stopgain 0.005 0 38 hm5C_associated_SNPs_26637 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26597180-26597220
64251 chr1 12317054 12317054 1 + G A LUAD 12317053 + 12317033 12317073 41 CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTCCTC CTAATACAAAGCTGCAATACCAGCAAATCATGGAATTCCTC < 41bp 1 0.215357275037349 1 0.376029759645462 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12317053 chr1:12317054 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_26638 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:12317041-12317064
64251 chr7 100275138 100275138 1 + G A LUAD 100275144 + 100275124 100275164 41 CACGCCATCCCGCTGCGCTCCTCCTGGGTAATGACCTGTGC CACGCCATCCCGCTACGCTCCTCCTGGGTAATGACCTGTGC < 41bp 1 0.6012237472603 1 0.41372150182724 experiment 0.7975525054794 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275144 chr7:100275138 synonymous SNV . 0 15 hm5C_associated_SNPs_26640 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:100275119-100275147
64251 chr5 14498735 14498735 1 + G T LUAD 14498746 + 14498726 14498766 41 CGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG CGTCGGCCATCCTGAGGGTCCTAGGTAAGCACCGTGCAACG < 41bp 1 0.395673927008759 1 0.233690232038498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14498746 chr5:14498735 nonsynonymous SNV 0.933 3 10 hm5C_associated_SNPs_26641 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14498717-14498739
64251 chr1 109773541 109773541 1 + A T LUAD 109773540 + 109773520 109773560 41 GAGGATTTGGGGTGATTGTACAGTCAGGAAGAAGTACTCTC GAGGATTTGGGGTGATTGTACTGTCAGGAAGAAGTACTCTC < 41bp 1 0.280871524803707 1 0.0609756708145142 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SARS ENSG00000031698 CDS Human protein_coding chr1:109773540 chr1:109773541 synonymous SNV . 0 22 hm5C_associated_SNPs_26642 0 0 26 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109773500-109773546
64251 chr20 62373320 62373320 1 + G A LUAD 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTAACCAGTCCTCTCCGTCCACCCCGTCACC < 41bp 1 0.0602799140276986 1 0.0295876860618591 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373320 nonsynonymous SNV 0.970 1 13 hm5C_associated_SNPs_26644 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr2 46611667 46611667 1 + C T LUAD 46611654 + 46611634 46611674 41 AACCCTTCTTTCAGGCATGGCAAGCCGGCTGCTCGGGCCCT AACCCTTCTTTCAGGCATGGCAAGCCGGCTGCTTGGGCCCT < 41bp 1 0.185057077002805 1 0.375244349241257 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46611654 chr2:46611667 synonymous SNV . 0 34 hm5C_associated_SNPs_26650 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:46611661-46611679
64251 chr19 49404089 49404089 1 + G C LUAD 49404083 + 49404063 49404103 41 TCTGGGCCCCGAGGAACCCTCCTTCTGTTGCCGCTGCTGCT TCTGGGCCCCGAGGAACCCTCCTTCTCTTGCCGCTGCTGCT < 41bp 1 0.0244724802257403 1 0.103273451328278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUCB1 ENSG00000104805 CDS Human protein_coding chr19:49404083 chr19:49404089 synonymous SNV . 0 27 hm5C_associated_SNPs_26651 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:49404080-49404100
64251 chr12 58109591 58109591 1 + G T LUAD 58109596 + 58109576 58109616 41 GACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA GACTACATCGATCGCTTGGACGAGCCCTTGTCCTGCTCTTA < 41bp 1 0.447834067871439 1 0.666000425815582 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109596 chr12:58109591 nonsynonymous SNV 0.577 3 16 hm5C_associated_SNPs_26652 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr12 58109591 58109591 1 + G T LUAD 58109602 + 58109582 58109622 41 ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT ATCGATCGCTTGGACGAGCCCTTGTCCTGCTCTTATGTGCT < 41bp 1 0.376814376599115 1 0.0581540167331696 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OS9 ENSG00000135506 CDS Human protein_coding chr12:58109602 chr12:58109591 nonsynonymous SNV 0.577 3 10 hm5C_associated_SNPs_26653 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr1 62241001 62241001 1 + G T LUAD 62240987 + 62240967 62241007 41 GGTTGTGAGGACTATAGTTCCTGGAGGATTAGCAGATCGAG GGTTGTGAGGACTATAGTTCCTGGAGGATTAGCATATCGAG < 41bp 1 0.773114887868509 1 0.63029021024704 experiment 0.453770224262982 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62240987 chr1:62241001 nonsynonymous SNV 0.998 4 35 hm5C_associated_SNPs_26655 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:62240979-62241005
64251 chr1 62241001 62241001 1 + G T LUAD 62241004 + 62240984 62241024 41 TTCCTGGAGGATTAGCAGATCGAGTAAGTCAACCTTCCTTG TTCCTGGAGGATTAGCATATCGAGTAAGTCAACCTTCCTTG < 41bp 1 0.468216310195008 1 0.331790894269943 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62241004 chr1:62241001 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_26656 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:62240979-62241005
64251 chr11 8706410 8706410 1 + G T LUAD 8706393 + 8706373 8706413 41 ACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTG ACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGTCTG < 41bp 1 0.63028920329709 1 0.752108812332153 experiment 0.739421593405819 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL27A ENSG00000166441 CDS Human protein_coding chr11:8706393 chr11:8706410 nonsynonymous SNV 0.755 0 38 hm5C_associated_SNPs_26657 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:8706392-8706439
64251 chr13 113907476 113907476 1 + G T LUAD 113907465 + 113907445 113907485 41 GTGGTCGAAAACTTCAGTGGCAAACTACTTTGGGACATGCT GTGGTCGAAAACTTCAGTGGCAAACTACTTTTGGACATGCT < 41bp 1 0.0679949702704002 1 0.087164431810379 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CUL4A ENSG00000139842 CDS Human protein_coding chr13:113907465 chr13:113907476 nonsynonymous SNV 0.373 2 32 hm5C_associated_SNPs_26658 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113907453-113907491
64251 chr22 41742176 41742176 1 + G T LUAD 41742194 + 41742174 41742214 41 CTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT CTTAAGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT < 41bp 1 0.381822328156786 1 0.148411124944687 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41742194 chr22:41742176 synonymous SNV . 0 3 hm5C_associated_SNPs_26659 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:41742176-41742208
64251 chr2 238671518 238671518 1 + G C LUAD 238671535 + 238671515 238671555 41 CAGGTTGAGTCAAATGAGGTCATGGGTGCACCAGATGACAG CAGCTTGAGTCAAATGAGGTCATGGGTGCACCAGATGACAG < 41bp 1 0.400602618041346 1 0.593807935714722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238671535 chr2:238671518 nonsynonymous SNV 0.002 1 4 hm5C_associated_SNPs_26660 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:238671500-238671520
64251 chrX 2632486 2632486 1 + G T LUAD 2632489 + 2632469 2632509 41 GTTTCGATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT GTTTCGATTTATCCGATTCCCTTCCTGGTGAGTATCAACAT < 41bp 1 0.129721307213927 1 0.0568150877952576 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2632489 chrX:2632486 nonsynonymous SNV 0.108 3 18 hm5C_associated_SNPs_26661 0 0 3 DDX3X POSTAR2 ENCODE chrX:2632462-2632496
64251 chr16 5127932 5127932 1 + C T LUAD 5127916 + 5127896 5127936 41 ATTTCATTGCAGGGCTGTGACCGTCTACGACAAGCCCGCAT ATTTCATTGCAGGGCTGTGACCGTCTACGACAAGCCTGCAT < 41bp 1 0.148779700481095 1 0.210621058940887 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127916 chr16:5127932 synonymous SNV . 0 37 hm5C_associated_SNPs_26664 0 0 2 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr2 203421050 203421050 1 + G T LUAD 203421065 + 203421045 203421085 41 GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA GTCTTTTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA < 41bp 1 0.289792709183324 1 0.485184192657471 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203421065 chr2:203421050 nonsynonymous SNV 0.989 1 6 hm5C_associated_SNPs_26665 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:203421032-203421052
64251 chr6 107100092 107100092 1 + G T LUAD 107100110 + 107100090 107100130 41 AGGATCAGATACAGGAGGATCGACCAGAAATCCTGCTGCCC AGTATCAGATACAGGAGGATCGACCAGAAATCCTGCTGCCC < 41bp 1 0.408882019524897 1 0.250573366880417 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107100110 chr6:107100092 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_26667 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:107100085-107100108
64251 chrX 73047050 73047050 1 - C A LUAD 73047047 - 73047027 73047067 41 TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC TCAGAGCAAGCATTGTGTAGCGGTTCCTTATGCCAGGCTGC < 41bp 1 0.147054369791922 1 0.18011811375618 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047047 chrX:73047050 . . 0 18 hm5C_associated_SNPs_26668 0 0 81 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr6 107100091 107100091 1 + G T LUAD 107100110 + 107100090 107100130 41 AGGATCAGATACAGGAGGATCGACCAGAAATCCTGCTGCCC ATGATCAGATACAGGAGGATCGACCAGAAATCCTGCTGCCC < 41bp 1 0.352730446264478 1 0.188787966966629 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107100110 chr6:107100091 stopgain 1.000 1 2 hm5C_associated_SNPs_26669 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:107100085-107100108
64251 chr2 169551539 169551539 1 + A G LUAD 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTGATGTTTTCTCGGTTCACTGATATCAAAA < 41bp 1 0.720684236961042 1 0.725809872150421 experiment 0.558631526077916 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551539 nonsynonymous SNV 0.993 5 24 hm5C_associated_SNPs_26671 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:169551515-169551551
64251 chr19 44515277 44515277 1 + A G LUAD 44515278 + 44515258 44515298 41 GAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT GAATCCACAGTGGAGAAAAGCCATACAGATGTGAGGAGTGT < 41bp 1 0.252149405846013 1 0.0293356776237488 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515278 chr19:44515277 synonymous SNV . 0 20 hm5C_associated_SNPs_26673 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515256-44515280
64251 chr6 147635025 147635025 1 + C A LUAD 147635039 + 147635019 147635059 41 GATATCCTATATTTGAAAATCCCTACCCTTTGAGTATACAT GATATCATATATTTGAAAATCCCTACCCTTTGAGTATACAT < 41bp 1 0.0999771231181426 1 0.18326935172081 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147635039 chr6:147635025 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_26676 0 0 2 FXR1 POSTAR2 ENCODE chr6:147635024-147635168
64251 chr19 44515285 44515285 1 + G A LUAD 44515278 + 44515258 44515298 41 GAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT GAATCCACAGTGGAGAAAAACCATACAAATGTGAGGAGTGT < 41bp 1 0.258198280504117 1 0.0731462240219116 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515278 chr19:44515285 nonsynonymous SNV 0.002 0 28 hm5C_associated_SNPs_26677 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:44515258-44515285
64251 chr12 132546759 132546759 1 + G A LUAD 132546776 + 132546756 132546796 41 AACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCT AACAACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCT < 41bp 1 0.0622973414316179 1 0.445875436067581 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546776 chr12:132546759 synonymous SNV . 0 4 hm5C_associated_SNPs_26678 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:132546750-132546784
64251 chr3 180693108 180693108 1 + T C LUAD 180693102 + 180693082 180693122 41 TTTTTCTCATCTTTAACAGTCACAGTTGCAGATTATATTTC TTTTTCTCATCTTTAACAGTCACAGTCGCAGATTATATTTC < 41bp 1 0.2039455275269 1 0.223197817802429 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FXR1 ENSG00000114416 CDS Human protein_coding chr3:180693102 chr3:180693108 synonymous SNV . 0 27 hm5C_associated_SNPs_26680 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr3:180693100-180693125
64251 chr17 37074986 37074986 1 + C T LUAD 37075006 + 37074986 37075026 41 CGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA TGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA < 41bp 1 0.651085002375117 1 0.500039875507355 experiment 0.697829995249765 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37075006 chr17:37074986 synonymous SNV . 0 1 hm5C_associated_SNPs_26681 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:37074965-37074990
64251 chr7 129394889 129394889 1 + G C LUAD 129394901 + 129394881 129394921 41 ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG ATGTACCACACTGTGGTGACCAGCCTCGCCCAGGGCAACGG < 41bp 1 0.55496327719372 1 0.161623865365982 experiment 0.890073445612561 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394901 chr7:129394889 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_26682 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr5 131607089 131607089 1 + C A LUAD 131607104 + 131607084 131607124 41 GAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG GAGCCAGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG < 41bp 1 0.669232795116367 1 0.308423817157745 experiment 0.661534409767267 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607104 chr5:131607089 synonymous SNV . 0 6 hm5C_associated_SNPs_26684 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr17 54912529 54912529 1 + C T LUAD 54912549 + 54912529 54912569 41 CACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTG TACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTG < 41bp 1 0.316663157126868 1 0.217803537845612 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912549 chr17:54912529 nonsynonymous SNV 1.000 5 1 hm5C_associated_SNPs_26685 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:54912489-54912530
64251 chr3 47456482 47456482 1 - C A LUAD 47456479 - 47456459 47456499 41 GGCCTTTTGTCCTCAGGGACCCCAGGGCGGGGCAGTTCCCC GGCCTTTTGTCCTCAGGTACCCCAGGGCGGGGCAGTTCCCC < 41bp 1 0.22449932473355 1 0.140099227428436 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAP ENSG00000114650 CDS Human protein_coding chr3:47456479 chr3:47456482 synonymous SNV . 0 18 hm5C_associated_SNPs_26686 0 0 6 EFTUD2 POSTAR2 ENCODE chr3:47456451-47456528
64251 chr6 161470184 161470184 1 + A T LUAD 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATTTTATTAATGAAATCCTTACTTTCAAAGTCGACTAT < 41bp 1 0.0623703582617717 1 0.0436903536319733 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470184 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_26687 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:161470180-161470200
64251 chr2 128867293 128867293 1 + A G LUAD 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGACTTGTGAATCTGATACCCTTGGGGCTCTTCTACTGA < 41bp 1 0.0409666393607709 1 0.0562422871589661 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867293 nonsynonymous SNV 0.107 0 27 hm5C_associated_SNPs_26688 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:128867264-128867315
64251 chr19 18266787 18266787 1 + T C LUAD 18266796 + 18266776 18266816 41 CGTGCTGGTAGTGAGCCGGGCGGCCTTGCAGGCGCTGGGCG CGTGCTGGTAGCGAGCCGGGCGGCCTTGCAGGCGCTGGGCG < 41bp 1 0.575686054826404 1 0.600918531417847 experiment 0.848627890347191 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIK3R2 ENSG00000105647;ENSG00000268173 CDS Human other chr19:18266796 chr19:18266787 nonsynonymous SNV 0.993 3 12 hm5C_associated_SNPs_26689 0 0 1 FXR2 POSTAR2 ENCODE chr19:18266776-18266860
64251 chr19 35761990 35761990 1 + A G LUAD 35762006 + 35761986 35762026 41 AAAAATTGATGGAACCAGAACACCCCGAGATGAGAGGAGAA AAAAGTTGATGGAACCAGAACACCCCGAGATGAGAGGAGAA < 41bp 1 0.138654504006609 1 0.347886055707932 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USF2 ENSG00000105698 CDS Human protein_coding chr19:35762006 chr19:35761990 nonsynonymous SNV 0.995 2 5 hm5C_associated_SNPs_26690 0 0 24 UPF1 POSTAR2 GSE69586,GSM1704215 chr19:35761980-35762000
64251 chr15 64966541 64966541 1 + C T LUAD 64966550 + 64966530 64966570 41 GTCCTAATTGACTGTCCCCACCCAAACTGCAACAAGAAGTA GTCCTAATTGATTGTCCCCACCCAAACTGCAACAAGAAGTA < 41bp 1 0.165988527632534 1 0.443990856409073 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64966550 chr15:64966541 synonymous SNV . 0 12 hm5C_associated_SNPs_26691 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:64966519-64966557
64251 chr3 9854722 9854722 1 + A T LUAD 9854727 + 9854707 9854747 41 GATGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCCAGA GATGGTCCATCGCTCTGGCCCCACCCTGCTGCCACCCCAGA < 41bp 1 0.0821279246227912 1 0.0412717759609222 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9854727 chr3:9854722 synonymous SNV . 0 16 hm5C_associated_SNPs_26692 0 0 7 BUD13 POSTAR2 ENCODE chr3:9854687-9854803
64251 chr12 54394171 54394171 1 + G A LUAD 54394180 + 54394160 54394200 41 GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTA GCACGTCGTGGACGCCCGTGCCCTCTCAGTCGTCCGTGGTA < 41bp 1 0.146989383424295 1 0.0312588214874268 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394180 chr12:54394171 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_26693 0 0 3 NONO POSTAR2 ENCODE chr12:54394125-54394198
64251 chr15 81295659 81295659 1 + G T LUAD 81295655 + 81295635 81295675 41 TCAGGCTTTAAGGGAGAGGTCTTCGCCCAGGACTTTACCGC TCAGGCTTTAAGGGAGAGGTCTTCTCCCAGGACTTTACCGC < 41bp 1 0.118817333139377 1 0.104428589344025 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81295655 chr15:81295659 synonymous SNV . 0 25 hm5C_associated_SNPs_26694 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:81295611-81295676
64251 chr11 8704331 8704331 1 + A T LUAD 8704345 + 8704325 8704365 41 TGGCGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGT TGGCGATGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGT < 41bp 1 0.421331183338637 1 0.374651849269867 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704345 chr11:8704331 . . 0 7 hm5C_associated_SNPs_26696 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 8704331 8704331 1 + A T LUAD 8704348 + 8704328 8704368 41 CGAAGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGG CGATGGCCTTCCTTTTTCGTCTGGGCTGCCAACATGGTAGG < 41bp 1 0.672733928303903 1 0.186824142932892 experiment 0.654532143392193 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RPL27A ENSG00000166441 UTR5 Human protein_coding chr11:8704348 chr11:8704331 . . 0 4 hm5C_associated_SNPs_26697 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:8704320-8704340
64251 chr11 67075183 67075183 1 + C T LUAD 67075191 + 67075171 67075211 41 CTGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCGGGTC CTGGAGTCTCTGTGGCCTCCCAGCGCCGAGCCTGGCGGGTC < 41bp 1 0.679032439140951 1 0.774988532066345 experiment 0.641935121718097 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075191 chr11:67075183 nonsynonymous SNV 0.847 3 13 hm5C_associated_SNPs_26698 0 0 1 PPIG POSTAR2 ENCODE chr11:67075173-67075183
64251 chr8 145695012 145695012 1 + A G LUAD 145695008 + 145694988 145695028 41 CCGCCTAGACTGGGTCTTCCCTCCAGACGCCAGCCAGGAGG CCGCCTAGACTGGGTCTTCCCTCCGGACGCCAGCCAGGAGG < 41bp 1 0.739769015081553 1 0.943302989006042 experiment 0.520461969836895 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145695008 chr8:145695012 synonymous SNV . 0 25 hm5C_associated_SNPs_26699 0 0 3 BUD13 POSTAR2 ENCODE chr8:145694995-145695029
64251 chr5 5464644 5464644 1 + C G LUAD 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCCTGTGCCTGGCCGACTCCCAGCCTGTGCATCTGGC < 41bp 1 0.16420606330315 1 0.421148836612701 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464644 nonsynonymous SNV 0.018 0 27 hm5C_associated_SNPs_26700 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5464617-5464651
64251 chr20 37580963 37580963 1 + T C LUAD 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT TGGGCACCCCCCACCTGGAACTGTACCTGAGTGACTCACTT < 41bp 1 0.266439291511562 1 0.108684629201889 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580963 synonymous SNV . 0 27 hm5C_associated_SNPs_26701 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr3 16312542 16312542 1 + T C LUAD 16312562 + 16312542 16312582 41 TGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGA CGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGA < 41bp 1 0.237029427059967 1 0.163605570793152 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16312562 chr3:16312542 nonsynonymous SNV 0.003 0 1 hm5C_associated_SNPs_26705 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:16312508-16312543
64251 chr5 908488 908488 1 + G T LUAD 908507 + 908487 908527 41 CGCCCGAAATGCCTGCAGGGCGGGCACCGAGCCATCAGATG CTCCCGAAATGCCTGCAGGGCGGGCACCGAGCCATCAGATG < 41bp 1 0.538778764017312 1 0.347386986017227 experiment 0.922442471965377 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908507 chr5:908488 nonsynonymous SNV 0.055 2 2 hm5C_associated_SNPs_26706 0 0 1 DDX24 POSTAR2 ENCODE chr5:908469-908500
64251 chr5 14280534 14280534 1 + C A LUAD 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCATGT < 41bp 1 0.272192834210896 1 0.12235164642334 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280534 synonymous SNV . 0 38 hm5C_associated_SNPs_26707 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr19 14030640 14030640 1 + C A LUAD 14030636 + 14030616 14030656 41 CGACTGGCCACCCAGGCTTCCCCCCAATCCAGGGCCTGGAG CGACTGGCCACCCAGGCTTCCCCCAAATCCAGGGCCTGGAG < 41bp 1 0.287720591003045 1 0.0628082752227783 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030636 chr19:14030640 nonsynonymous SNV 0.962 4 25 hm5C_associated_SNPs_26709 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221659 chr19:14030620-14030640
64251 chr4 79440603 79440603 1 + C A LUAD 79440588 + 79440568 79440608 41 GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCT GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTATTTCT < 41bp 1 0.157947840970285 1 0.60049569606781 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440588 chr4:79440603 nonsynonymous SNV 0.989 3 36 hm5C_associated_SNPs_26710 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 79440603 79440603 1 + C A LUAD 79440589 + 79440569 79440609 41 GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCTT GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTATTTCTT < 41bp 1 0.390329373915371 1 0.681932866573334 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440589 chr4:79440603 nonsynonymous SNV 0.989 3 35 hm5C_associated_SNPs_26711 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 123748452 123748452 1 + G T LUAD 123748458 + 123748438 123748478 41 GGGGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGA GGGGGCTTCTTCCTTCGCATCCACCCCGACGGCCGAGTTGA < 41bp 1 0.14671908260317 1 0.0406529307365417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748458 chr4:123748452 synonymous SNV . 0 15 hm5C_associated_SNPs_26724 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr4 123748452 123748452 1 + G T LUAD 123748462 + 123748442 123748482 41 GCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGG GCTTCTTCCTTCGCATCCACCCCGACGGCCGAGTTGACGGG < 41bp 1 0.714247947644818 1 0.129297912120819 experiment 0.571504104710364 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748462 chr4:123748452 synonymous SNV . 0 11 hm5C_associated_SNPs_26725 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr5 38885506 38885506 1 + G A LUAD 38885507 + 38885487 38885527 41 CCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGG CCGAGGACTTCAAGACTTTACACTGTACTTGGGATCCTGGG < 41bp 1 0.424250034070679 1 0.0830346643924713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OSMR ENSG00000145623 CDS Human protein_coding chr5:38885507 chr5:38885506 synonymous SNV . 0 20 hm5C_associated_SNPs_26726 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:38885500-38885520
64251 chr11 64054308 64054308 1 + C T LUAD 64054320 + 64054300 64054340 41 CCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCT CCCGTCTGTCTGCAGTTCTTCACCTTGACGCTTATGAACCT < 41bp 1 0.332917577113295 1 0.303435325622559 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPR137 ENSG00000173264 CDS Human protein_coding chr11:64054320 chr11:64054308 synonymous SNV . 0 9 hm5C_associated_SNPs_26727 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64054291-64054332
64251 chr5 179150667 179150667 1 + G A LUAD 179150661 + 179150641 179150681 41 AGCCCTGTCTTGTTTTTCAGCCAGGCGTTGTGGGGCAGATG AGCCCTGTCTTGTTTTTCAGCCAGGCATTGTGGGGCAGATG < 41bp 1 0.422603036705362 1 0.388245314359665 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150661 chr5:179150667 nonsynonymous SNV 0.019 1 27 hm5C_associated_SNPs_26728 0 0 37 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr5 179150667 179150667 1 + G A LUAD 179150666 + 179150646 179150686 41 TGTCTTGTTTTTCAGCCAGGCGTTGTGGGGCAGATGATCGA TGTCTTGTTTTTCAGCCAGGCATTGTGGGGCAGATGATCGA < 41bp 1 0.207776453771208 1 0.13556444644928 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179150666 chr5:179150667 nonsynonymous SNV 0.019 1 22 hm5C_associated_SNPs_26729 0 0 37 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr5 179150667 179150667 1 + G A LUAD 179150676 + 179150656 179150696 41 TTCAGCCAGGCGTTGTGGGGCAGATGATCGAGGCAGCTGAA TTCAGCCAGGCATTGTGGGGCAGATGATCGAGGCAGCTGAA < 41bp 1 0.404547419504536 1 0.368180334568024 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179150676 chr5:179150667 nonsynonymous SNV 0.019 1 12 hm5C_associated_SNPs_26730 0 0 37 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr11 65386199 65386199 1 + G A LUAD 65386204 + 65386184 65386224 41 TCCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG TCCTGCTACTCCCCTAAGAGCTCCCGGGGTGCAGCAGGGGG < 41bp 1 0.233841067208605 1 0.335712313652039 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386204 chr11:65386199 nonsynonymous SNV 0.994 1 16 hm5C_associated_SNPs_26732 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65386160-65386200
64251 chr17 7838353 7838353 1 + C T LUAD 7838362 + 7838342 7838382 41 CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC CAGCCCAAGCCTTGGAGGAGCTGTTTCCCCGCTACACCAGC < 41bp 1 0.177691708355985 1 0.118254870176315 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7838362 chr17:7838353 synonymous SNV . 0 12 hm5C_associated_SNPs_26736 0 0 1 U2AF1 POSTAR2 ENCODE chr17:7838307-7838386
64251 chr17 37676281 37676281 1 + A G LUAD 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGCGGTGCACAGCTGAGCAGACCCTACA < 41bp 1 0.180701581783849 1 0.130459606647491 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676281 synonymous SNV . 0 30 hm5C_associated_SNPs_26737 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr5 149751720 149751720 1 + A G LUAD 149751738 + 149751718 149751758 41 CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT CAGGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT < 41bp 1 0.339947266026397 1 0.667501270771027 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751738 chr5:149751720 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_26738 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr3 38287626 38287626 1 + C T LUAD 38287619 + 38287599 38287639 41 CTCCAAGTTCCAGAACAGATCTCTGCTCATCTACCTCAGCC CTCCAAGTTCCAGAACAGATCTCTGCTTATCTACCTCAGCC < 41bp 1 0.443228624159659 1 0.084006279706955 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38287619 chr3:38287626 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_26739 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:38287618-38287650
64251 chr17 74554932 74554932 1 + C G LUAD 74554936 + 74554916 74554956 41 TCTTTTGTGAGGAGGTCTGACTTGCTGAGGCTCAGCTGTTT TCTTTTGTGAGGAGGTGTGACTTGCTGAGGCTCAGCTGTTT < 41bp 1 0.221406179983741 1 0.0309834182262421 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554936 chr17:74554932 . . 0 17 hm5C_associated_SNPs_26740 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr17 74554932 74554932 1 + C G LUAD 74554946 + 74554926 74554966 41 GGAGGTCTGACTTGCTGAGGCTCAGCTGTTTAATACAAATC GGAGGTGTGACTTGCTGAGGCTCAGCTGTTTAATACAAATC < 41bp 1 0.290486358632068 1 0.147736668586731 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554946 chr17:74554932 . . 0 7 hm5C_associated_SNPs_26741 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr17 74554932 74554932 1 + C G LUAD 74554948 + 74554928 74554968 41 AGGTCTGACTTGCTGAGGCTCAGCTGTTTAATACAAATCTG AGGTGTGACTTGCTGAGGCTCAGCTGTTTAATACAAATCTG < 41bp 1 0.4397954668475 1 0.247583836317062 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1C ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554948 chr17:74554932 . . 0 5 hm5C_associated_SNPs_26742 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74554928-74554948
64251 chr2 183622484 183622484 1 + G A LUAD 183622482 + 183622462 183622502 41 AGTATCATTCTTTTTGTGCCCAGGAAAACGTTCAAAGATAC AGTATCATTCTTTTTGTGCCCAAGAAAACGTTCAAAGATAC < 41bp 1 0.733800259123092 1 0.34348338842392 experiment 0.532399481753817 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183622482 chr2:183622484 synonymous SNV . 0 23 hm5C_associated_SNPs_26743 0 0 2 DDX24 POSTAR2 ENCODE chr2:183622464-183622555
64251 chr19 10812882 10812882 1 + G A LUAD 10812865 + 10812845 10812885 41 GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGAGA GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATAAGA < 41bp 1 0.184304520908192 1 0.086523026227951 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812865 chr19:10812882 nonsynonymous SNV 0.664 0 38 hm5C_associated_SNPs_26744 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:10812871-10812912
64251 chr19 13051205 13051205 1 + C T LUAD 13051210 + 13051190 13051230 41 AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGG AGGATCCTGATGCTTTAAAACCGGAAGACTGGGATGAGCGG < 41bp 1 0.753640058895774 1 0.440314650535583 experiment 0.492719882208451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051210 chr19:13051205 nonsynonymous SNV 0.738 1 16 hm5C_associated_SNPs_26746 0 0 44 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13051201-13051225
64251 chr2 33526632 33526632 1 + G T LUAD 33526650 + 33526630 33526670 41 CAGTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGA CATTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGA < 41bp 1 0.149134782749845 1 0.0863726735115051 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526650 chr2:33526632 nonsynonymous SNV 0.756 1 3 hm5C_associated_SNPs_26748 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:33526632-33526655
64251 chr2 33526632 33526632 1 + G T LUAD 33526652 + 33526632 33526672 41 GTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGACC TTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGACC < 41bp 1 0.0398901602264914 1 0.032461553812027 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526652 chr2:33526632 nonsynonymous SNV 0.756 1 1 hm5C_associated_SNPs_26749 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:33526632-33526655
64251 chr20 62312042 62312042 1 + C T LUAD 62312059 + 62312039 62312079 41 GGCCGGACTGCAGAAGCTGGCGGACATTATCCAGGTGGGGC GGCTGGACTGCAGAAGCTGGCGGACATTATCCAGGTGGGGC < 41bp 1 0.222125966213746 1 0.424872696399689 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62312059 chr20:62312042 synonymous SNV . 0 4 hm5C_associated_SNPs_26758 0 0 4 PPIG POSTAR2 ENCODE chr20:62312024-62312056
64251 chr19 11145653 11145653 1 + G T LUAD 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGTAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC < 41bp 1 0.0822640245288171 1 0.0778112709522247 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145653 stopgain 0.998 1 6 hm5C_associated_SNPs_26759 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145653 11145653 1 + G T LUAD 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGTAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG < 41bp 1 0.180216196078568 1 0.158548444509506 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145653 stopgain 0.998 1 5 hm5C_associated_SNPs_26760 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145653 11145653 1 + G T LUAD 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GTAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG < 41bp 1 0.594400125354056 1 0.610330581665039 experiment 0.811199749291887 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145653 stopgain 0.998 1 2 hm5C_associated_SNPs_26761 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr5 128440942 128440942 1 + G A LUAD 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTAAAGGTCTTGAGAGCACGGTTCAAGAAATTGATTT < 41bp 1 0.660000235488165 1 0.41410368680954 experiment 0.67999952902367 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440942 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_26762 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:128440907-128440945
64251 chr11 94599272 94599272 1 + T C LUAD 94599284 + 94599264 94599304 41 CAGACCTCTCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAA CAGACCTCCCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAA < 41bp 1 0.0266962445090205 1 0.155204087495804 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94599284 chr11:94599272 synonymous SNV . 0 9 hm5C_associated_SNPs_26765 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:94599240-94599280
64251 chr11 94599272 94599272 1 + T C LUAD 94599292 + 94599272 94599312 41 TCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAAGGAAGAGA CCTTACCAGCAGCCAGCTGGCTGAGGAAAAGAAGGAAGAGA < 41bp 1 0.515773459176225 1 0.472280561923981 experiment 0.968453081647551 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94599292 chr11:94599272 synonymous SNV . 0 1 hm5C_associated_SNPs_26766 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:94599240-94599280
64251 chr22 23438430 23438430 1 + C T LUAD 23438428 + 23438408 23438448 41 CTGCGCTCCCGGGACATGACCACGGGCATTGTGGAGAACAA CTGCGCTCCCGGGACATGACCATGGGCATTGTGGAGAACAA < 41bp 1 0.405544969804232 1 0.638106465339661 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438428 chr22:23438430 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_26767 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23438410-23438438
64251 chr2 97008585 97008585 1 + A G LUAD 97008573 + 97008553 97008593 41 TAAACAGAAAGACACCGAACCAACCAACTTTAAAGTAAGAA TAAACAGAAAGACACCGAACCAACCAACTTTAGAGTAAGAA < 41bp 1 0.0559675963321005 1 0.202159583568573 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCAPH ENSG00000121152 CDS Human protein_coding chr2:97008573 chr2:97008585 nonsynonymous SNV 0.997 4 33 hm5C_associated_SNPs_26768 0 0 1 PRPF8 POSTAR2 ENCODE chr2:97008584-97008614
64251 chr2 182784139 182784139 1 + G T LUAD 182784123 + 182784103 182784143 41 GCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCGCATG GCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCTCATG < 41bp 1 0.75552415428052 1 0.208286732435226 experiment 0.488951691438959 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182784123 chr2:182784139 nonsynonymous SNV 0.000 1 37 hm5C_associated_SNPs_26771 0 0 4 BUD13 POSTAR2 ENCODE chr2:182784137-182784197
64251 chrX 73045778 73045778 1 - C A LUAD 73045760 - 73045740 73045780 41 TAGGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTT TATGCTTAAAGATGAGAGAACCTGGGACTGTTGAGCATGTT < 41bp 1 0.0633937784808357 1 0.150507211685181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045760 chrX:73045778 . . 0 3 hm5C_associated_SNPs_26773 0 0 81 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr2 74682700 74682700 1 + G A LUAD 74682720 + 74682700 74682740 41 GGGGGACAAGTCCTGGGGACCAAGAGGTGAGGCCAAGAGGG AGGGGACAAGTCCTGGGGACCAAGAGGTGAGGCCAAGAGGG < 41bp 1 0.752051587237152 1 0.81641960144043 experiment 0.495896825525695 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INO80B ENSG00000115274 CDS Human protein_coding chr2:74682720 chr2:74682700 nonsynonymous SNV 0.947 4 1 hm5C_associated_SNPs_26776 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74682682-74682704
64251 chr19 2249448 2249448 1 + C T LUAD 2249433 + 2249413 2249453 41 GAGGAGCCAGCTGTGGGCACCAGTGGCCTCATCTTCCGAGA GAGGAGCCAGCTGTGGGCACCAGTGGCCTCATCTTTCGAGA < 41bp 1 0.359291539140314 1 0.595661520957947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AMH ENSG00000104899 CDS Human protein_coding chr19:2249433 chr19:2249448 synonymous SNV . 0 36 hm5C_associated_SNPs_26777 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:2249412-2249467
64251 chr10 103908224 103908224 1 + C T LUAD 103908226 + 103908206 103908246 41 CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCCCCA CATCCTCATCATCCAGTTTTCGAAGCCGCTCACGATCCCCA < 41bp 1 0.472017444744396 1 0.804883599281311 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908226 chr10:103908224 nonsynonymous SNV 0.974 2 19 hm5C_associated_SNPs_26778 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr10:103908198-103908224
64251 chr3 45537832 45537832 1 + A G LUAD 45537850 + 45537830 45537870 41 CTACTTCAGATACACTGACCCTCATAATCCACACAGGTAAA CTGCTTCAGATACACTGACCCTCATAATCCACACAGGTAAA < 41bp 1 0.160548335739208 1 0.0368391573429108 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45537850 chr3:45537832 nonsynonymous SNV 0.995 4 3 hm5C_associated_SNPs_26779 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:45537810-45537832
64251 chr17 45673790 45673790 1 + C T LUAD 45673802 + 45673782 45673822 41 GGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCT GGACCAAATAAATGGGATTTCCCCTCATTTATGTGGAAGCT < 41bp 1 0.131839362675134 1 0.127249509096146 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45673802 chr17:45673790 stopgain 1.000 1 9 hm5C_associated_SNPs_26780 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:45673737-45673815
64251 chr12 113715048 113715048 1 + C T LUAD 113715049 + 113715029 113715069 41 CTTCCCTCTCCCCCAGAGGCCTGCCGGCATCTCCTACAGGC CTTCCCTCTCCCCCAGAGGTCTGCCGGCATCTCCTACAGGC < 41bp 1 0.341827158147205 1 0.0597029328346252 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113715049 chr12:113715048 nonsynonymous SNV 0.966 4 20 hm5C_associated_SNPs_26782 0 0 4 DDX24 POSTAR2 ENCODE chr12:113715040-113715091
64251 chr6 99283457 99283457 1 + C A LUAD 99283470 + 99283450 99283490 41 ACCCACACCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGT ACCCACAACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGT < 41bp 1 0.293371291697227 1 0.281689435243607 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283470 chr6:99283457 nonsynonymous SNV 0.998 0 8 hm5C_associated_SNPs_26783 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr6 99283457 99283457 1 + C A LUAD 99283471 + 99283451 99283491 41 CCCACACCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTC CCCACAACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTC < 41bp 1 0.516868265342867 1 0.692177653312683 experiment 0.966263469314266 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283471 chr6:99283457 nonsynonymous SNV 0.998 0 7 hm5C_associated_SNPs_26784 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr6 99283457 99283457 1 + C A LUAD 99283472 + 99283452 99283492 41 CCACACCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCC CCACAACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCC < 41bp 1 0.51744235448937 1 0.423825263977051 experiment 0.965115291021259 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283472 chr6:99283457 nonsynonymous SNV 0.998 0 6 hm5C_associated_SNPs_26785 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr6 99283457 99283457 1 + C A LUAD 99283473 + 99283453 99283493 41 CACACCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCG CACAACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCG < 41bp 1 0.436156958934087 1 0.325159221887589 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283473 chr6:99283457 nonsynonymous SNV 0.998 0 5 hm5C_associated_SNPs_26786 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr6 99283457 99283457 1 + C A LUAD 99283476 + 99283456 99283496 41 ACCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCGCCT AACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCGCCT < 41bp 1 0.464017983855213 1 0.516274094581604 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283476 chr6:99283457 nonsynonymous SNV 0.998 0 2 hm5C_associated_SNPs_26787 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr6 99283457 99283457 1 + C A LUAD 99283477 + 99283457 99283497 41 CCAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCGCCTG ACAGCAGCCGCCGCCCCCGCCGCCCCCGCAGGGTCCGCCTG < 41bp 1 0.636102633691933 1 0.518861413002014 experiment 0.727794732616134 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283477 chr6:99283457 nonsynonymous SNV 0.998 0 1 hm5C_associated_SNPs_26788 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr10 5789336 5789336 1 + G T LUAD 5789343 + 5789323 5789363 41 TTTAGAACTTCAGGATGTAGCTGAGGAAATAGGTGAACCGG TTTAGAACTTCAGTATGTAGCTGAGGAAATAGGTGAACCGG < 41bp 1 0.654465581624553 1 0.43637952208519 experiment 0.691068836750893 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5789343 chr10:5789336 nonsynonymous SNV 0.001 1 14 hm5C_associated_SNPs_26789 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5789275-5789380
64251 chr17 21731020 21731020 1 + G T LUAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT TATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT < 41bp 1 0.264617494426667 1 0.344255059957504 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731020 nonsynonymous SNV 0.433 1 1 hm5C_associated_SNPs_26792 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr11 65826401 65826401 1 + G T LUAD 65826381 + 65826361 65826401 41 TCCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCG TCCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCT < 41bp 1 0.551194984669354 1 0.518266797065735 experiment 0.897610030661292 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826381 chr11:65826401 nonsynonymous SNV 0.483 0 41 hm5C_associated_SNPs_26793 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826360-65826460
64251 chr6 107100441 107100441 1 + G T LUAD 107100423 + 107100403 107100443 41 ATTCATGCTTCCCAGTTTGGCAGATGTGAGCAAACTATGTA ATTCATGCTTCCCAGTTTGGCAGATGTGAGCAAACTATTTA < 41bp 1 0.509419211965064 1 0.446815878152847 experiment 0.981161576069872 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control QRSL1 ENSG00000130348 CDS Human protein_coding chr6:107100423 chr6:107100441 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_26794 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:107100411-107100446
64251 chr7 27211532 27211532 1 - A T LUAD 27211542 - 27211522 27211562 41 GAAAACCGGATCCGGGAGCTCACAGCCAACTTTAATTTTTC GAAAACCGGATCCGGGAGCTCACAGCCAACATTAATTTTTC < 41bp 1 0.259269515398508 1 0.204281121492386 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXA10 ENSG00000253293 CDS Human protein_coding chr7:27211542 chr7:27211532 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_26795 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:27211459-27211571
64251 chr7 77256328 77256328 1 + A G LUAD 77256319 + 77256299 77256339 41 AGTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAA AGTTTTGAGATTAAGAAGGTCCCTCTCCAGGAGGGACCAAA < 41bp 1 0.032400374757221 1 0.0138674378395081 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256319 chr7:77256328 synonymous SNV . 0 30 hm5C_associated_SNPs_26796 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256328 77256328 1 + A G LUAD 77256320 + 77256300 77256340 41 GTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAA GTTTTGAGATTAAGAAGGTCCCTCTCCAGGAGGGACCAAAA < 41bp 1 0.0334303740680121 1 0.0933127403259277 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256320 chr7:77256328 synonymous SNV . 0 29 hm5C_associated_SNPs_26797 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256328 77256328 1 + A G LUAD 77256321 + 77256301 77256341 41 TTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAAA TTTTGAGATTAAGAAGGTCCCTCTCCAGGAGGGACCAAAAA < 41bp 1 0.142915056101737 1 0.0448750257492065 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256321 chr7:77256328 synonymous SNV . 0 28 hm5C_associated_SNPs_26798 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256328 77256328 1 + A G LUAD 77256335 + 77256315 77256355 41 AGGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC AGGTCCCTCTCCAGGAGGGACCAAAAAGTTTTGATGGGAAC < 41bp 1 0.119990796969906 1 0.406006515026093 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256335 chr7:77256328 synonymous SNV . 0 14 hm5C_associated_SNPs_26799 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256328 77256328 1 + A G LUAD 77256336 + 77256316 77256356 41 GGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA GGTCCCTCTCCAGGAGGGACCAAAAAGTTTTGATGGGAACA < 41bp 1 0.294367350551231 1 0.648725986480713 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256336 chr7:77256328 synonymous SNV . 0 13 hm5C_associated_SNPs_26800 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr19 41778033 41778033 1 + G T LUAD 41778031 + 41778011 41778051 41 GAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC GAGCACCCACCAGCTTCCTCCCTCCTGAAGCTTCTCAACTC < 41bp 1 0.0525983863901314 1 0.116877019405365 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41778031 chr19:41778033 synonymous SNV . 0 23 hm5C_associated_SNPs_26801 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41777989-41778041
64251 chr19 36227600 36227600 1 + C T LUAD 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG TGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG < 41bp 1 0.00769621872998638 1 0.0831719040870667 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227600 nonsynonymous SNV 0.995 3 1 hm5C_associated_SNPs_26802 0 0 12 SRSF1 POSTAR2 GSE83923,GSM2221663 chr19:36227580-36227600
64251 chr16 57144676 57144676 1 + G A LUAD 57144680 + 57144660 57144700 41 CCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCC CCACATACCCAGTGGGAGTGCCCCAGCAGCGGGGGCAGCCC < 41bp 1 0.629845368413643 1 0.437915503978729 experiment 0.740309263172714 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144680 chr16:57144676 nonsynonymous SNV 0.025 0 17 hm5C_associated_SNPs_26803 0 0 1 DDX3X POSTAR2 ENCODE chr16:57144619-57144715
64251 chr16 57144676 57144676 1 + G A LUAD 57144681 + 57144661 57144701 41 CACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCC CACATACCCAGTGGGAGTGCCCCAGCAGCGGGGGCAGCCCC < 41bp 1 0.235494650708501 1 0.291856437921524 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144681 chr16:57144676 nonsynonymous SNV 0.025 0 16 hm5C_associated_SNPs_26804 0 0 1 DDX3X POSTAR2 ENCODE chr16:57144619-57144715
64251 chr16 57144676 57144676 1 + G A LUAD 57144682 + 57144662 57144702 41 ACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCC ACATACCCAGTGGGAGTGCCCCAGCAGCGGGGGCAGCCCCC < 41bp 1 0.36997382727193 1 0.380701333284378 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144682 chr16:57144676 nonsynonymous SNV 0.025 0 15 hm5C_associated_SNPs_26805 0 0 1 DDX3X POSTAR2 ENCODE chr16:57144619-57144715
64251 chr16 57144676 57144676 1 + G A LUAD 57144695 + 57144675 57144715 41 GGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGT GAGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGT < 41bp 1 0.202291372674619 1 0.241925120353699 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144695 chr16:57144676 nonsynonymous SNV 0.025 0 2 hm5C_associated_SNPs_26806 0 0 1 DDX3X POSTAR2 ENCODE chr16:57144619-57144715
64251 chr2 101598836 101598836 1 + C G LUAD 101598827 + 101598807 101598847 41 CAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGTGATCCC CAGCTCTGCCTGGTCCAGGACTCCAACGTGCAGGTGATCCC < 41bp 1 0.685454178079431 1 0.977352142333984 experiment 0.629091643841138 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101598827 chr2:101598836 synonymous SNV . 0 30 hm5C_associated_SNPs_26807 0 0 5 GRWD1 POSTAR2 ENCODE chr2:101598707-101598877
64251 chr6 142519584 142519584 1 + G A LUAD 142519603 + 142519583 142519623 41 AGAAAATGAAGATGCTGGAGCAGCCTCTCTGCCCACTCAGC AAAAAATGAAGATGCTGGAGCAGCCTCTCTGCCCACTCAGC < 41bp 1 0.28695660662256 1 0.234887003898621 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519603 chr6:142519584 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_26808 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:142519575-142519599
64251 chr22 39770447 39770447 1 + G T LUAD 39770450 + 39770430 39770470 41 ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTCACCTGCCTG ATGGCGTGGCCGTGGGCTTGCTCGCCTTCCTCACCTGCCTG < 41bp 1 0.679985719331195 1 0.114782243967056 experiment 0.64002856133761 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39770450 chr22:39770447 nonsynonymous SNV 0.964 1 18 hm5C_associated_SNPs_26809 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39770430-39770489
64251 chr3 9488802 9488802 1 + G A LUAD 9488809 + 9488789 9488829 41 AAAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAAC AAAGAAAGAAGCGACGGGATCAGCCCTTGGAACAGAGCAAC < 41bp 1 0.317061313042295 1 0.469285249710083 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9488809 chr3:9488802 synonymous SNV . 0 14 hm5C_associated_SNPs_26810 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9488768-9488806
64251 chr5 61778980 61778980 1 + G C LUAD 61778983 + 61778963 61779003 41 TACTCCTCTAATTCAGAGATCACTGGAATTTTCTGTAAGCT TACTCCTCTAATTCAGACATCACTGGAATTTTCTGTAAGCT < 41bp 1 0.126766469122691 1 0.105482041835785 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO11 ENSG00000086200 CDS Human protein_coding chr5:61778983 chr5:61778980 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_26812 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:61778958-61778996
64251 chr14 21549947 21549947 1 + A G LUAD 21549960 + 21549940 21549980 41 CGGTGCCAGCAGTGGAGGGGCCCAGTGGGGGCCCCGCAGCC CGGTGCCGGCAGTGGAGGGGCCCAGTGGGGGCCCCGCAGCC < 41bp 1 0.44180598211061 1 0.75158566236496 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21549960 chr14:21549947 nonsynonymous SNV 0.978 2 8 hm5C_associated_SNPs_26813 0 0 2 EIF3H POSTAR2 ENCODE chr14:21549806-21549961
64251 chr14 21549947 21549947 1 + A G LUAD 21549961 + 21549941 21549981 41 GGTGCCAGCAGTGGAGGGGCCCAGTGGGGGCCCCGCAGCCC GGTGCCGGCAGTGGAGGGGCCCAGTGGGGGCCCCGCAGCCC < 41bp 1 0.657741691319082 1 0.508081376552582 experiment 0.684516617361836 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21549961 chr14:21549947 nonsynonymous SNV 0.978 2 7 hm5C_associated_SNPs_26814 0 0 2 EIF3H POSTAR2 ENCODE chr14:21549806-21549961
64251 chr11 45832808 45832808 1 + G A LUAD 45832817 + 45832797 45832837 41 GCCTACACCTGGGTCAGGGGCTGGGAGATGAAGAAGACTCC GCCTACACCTGAGTCAGGGGCTGGGAGATGAAGAAGACTCC < 41bp 1 0.552266625729511 1 0.724731802940369 experiment 0.895466748540978 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832817 chr11:45832808 stopgain 1.000 1 12 hm5C_associated_SNPs_26815 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:45832775-45832831
64251 chr1 227923162 227923162 1 + C G LUAD 227923153 + 227923133 227923173 41 TTCACTGCGCAGGCGCCGAGCGGCCGAGGCGCCGCGGTCGG TTCACTGCGCAGGCGCCGAGCGGCCGAGGGGCCGCGGTCGG < 41bp 1 0.687674727380135 1 0.675351500511169 experiment 0.62465054523973 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227923153 chr1:227923162 nonsynonymous SNV 0.002 1 30 hm5C_associated_SNPs_26816 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:227923160-227923180
64251 chr20 42343776 42343776 1 + G A LUAD 42343775 + 42343755 42343795 41 GACTTGGTTTTGGTTTCAGCCGACAACTGCCCCTTCAAACT GACTTGGTTTTGGTTTCAGCCAACAACTGCCCCTTCAAACT < 41bp 1 0.518135231505884 1 0.609786212444305 experiment 0.963729536988233 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42343775 chr20:42343776 synonymous SNV . 0 22 hm5C_associated_SNPs_26817 0 0 16 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:42343760-42343780
64251 chr17 60768374 60768374 1 + G T LUAD 60768363 + 60768343 60768383 41 TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGC TGAACTACTCCAACTGGGGGCCCCCGGGCTTTGGCCCCAGC < 41bp 1 0.0361290043161495 1 0.177093863487244 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768363 chr17:60768374 nonsynonymous SNV 0.965 1 32 hm5C_associated_SNPs_26818 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768364 + 60768344 60768384 41 GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCA GAACTACTCCAACTGGGGGCCCCCGGGCTTTGGCCCCAGCA < 41bp 1 0.112804283973375 1 0.496063739061356 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768364 chr17:60768374 nonsynonymous SNV 0.965 1 31 hm5C_associated_SNPs_26819 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768365 + 60768345 60768385 41 AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCAT AACTACTCCAACTGGGGGCCCCCGGGCTTTGGCCCCAGCAT < 41bp 1 0.224622034779493 1 0.6790531873703 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768365 chr17:60768374 nonsynonymous SNV 0.965 1 30 hm5C_associated_SNPs_26820 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768377 + 60768357 60768397 41 TGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA TGGGGGCCCCCGGGCTTTGGCCCCAGCATGCTGAGCCACAA < 41bp 1 0.506747860649441 1 0.507440388202667 experiment 0.986504278701119 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768377 chr17:60768374 nonsynonymous SNV 0.965 1 18 hm5C_associated_SNPs_26821 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768378 + 60768358 60768398 41 GGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC GGGGGCCCCCGGGCTTTGGCCCCAGCATGCTGAGCCACAAC < 41bp 1 0.167658980956924 1 0.341413199901581 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768378 chr17:60768374 nonsynonymous SNV 0.965 1 17 hm5C_associated_SNPs_26822 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768379 + 60768359 60768399 41 GGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA GGGGCCCCCGGGCTTTGGCCCCAGCATGCTGAGCCACAACA < 41bp 1 0.0821036040785534 1 0.360452651977539 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768379 chr17:60768374 nonsynonymous SNV 0.965 1 16 hm5C_associated_SNPs_26823 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768374 60768374 1 + G T LUAD 60768380 + 60768360 60768400 41 GGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG GGGCCCCCGGGCTTTGGCCCCAGCATGCTGAGCCACAACAG < 41bp 1 0.654996603874609 1 0.692513823509216 experiment 0.690006792250782 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768380 chr17:60768374 nonsynonymous SNV 0.965 1 15 hm5C_associated_SNPs_26824 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr7 128505565 128505565 1 + A G LUAD 128505545 + 128505525 128505565 41 ATCCCCGCTGTCCTGGAGATCCCCTCCAAGGAGCACCCATA ATCCCCGCTGTCCTGGAGATCCCCTCCAAGGAGCACCCATG < 41bp 1 0.373011955010382 1 0.128354579210281 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP6V1F ENSG00000128524 CDS Human protein_coding chr7:128505545 chr7:128505565 nonsynonymous SNV 0.848 4 41 hm5C_associated_SNPs_26825 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:128505560-128505580
64251 chr11 67018026 67018026 1 + C T LUAD 67018018 + 67017998 67018038 41 CCCCGTGTGCTAGTGCAGCACTGCCCAGCCCGAACCCCCCA CCCCGTGTGCTAGTGCAGCACTGCCCAGTCCGAACCCCCCA < 41bp 1 0.638479033107458 1 0.176934808492661 experiment 0.723041933785085 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018018 chr11:67018026 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_26826 0 0 3 RBM15 POSTAR2 ENCODE chr11:67017996-67018048
64251 chr6 5369389 5369389 1 + G T LUAD 5369391 + 5369371 5369411 41 ATTTTCCACCAGCTGGAGGCCGTGCGGCTCTTCTCCAAGCA ATTTTCCACCAGCTGGAGTCCGTGCGGCTCTTCTCCAAGCA < 41bp 1 0.274829033792046 1 0.523481488227844 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FARS2 ENSG00000145982 CDS Human protein_coding chr6:5369391 chr6:5369389 nonsynonymous SNV 0.973 1 19 hm5C_associated_SNPs_26827 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:5369361-5369392
64251 chr10 60037063 60037063 1 + G T LUAD 60037076 + 60037056 60037096 41 TACTGCCGTTGTTGGAGGTCCAAAAAGGTGAGGAAAGCAAT TACTGCCTTTGTTGGAGGTCCAAAAAGGTGAGGAAAGCAAT < 41bp 1 0.568678819150526 1 0.405042052268982 experiment 0.862642361698948 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CISD1 ENSG00000122873 CDS Human protein_coding chr10:60037076 chr10:60037063 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_26828 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:60037055-60037082
64251 chr5 454086 454086 1 + G T LUAD 454080 + 454060 454100 41 ATGTACCACCAAGCCCTGAGCACGCGGATGCAGGACCTCGC ATGTACCACCAAGCCCTGAGCACGCGTATGCAGGACCTCGC < 41bp 1 0.635339694115129 1 0.350184291601181 experiment 0.729320611769741 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC3 ENSG00000180104 CDS Human protein_coding chr5:454080 chr5:454086 synonymous SNV . 0 27 hm5C_associated_SNPs_26843 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:454041-454087
64251 chr5 179149988 179149988 1 + G T LUAD 179149974 + 179149954 179149994 41 AAGAATAGTTGATGATTGGGCCAATGATGGATGGGGCCTGA AAGAATAGTTGATGATTGGGCCAATGATGGATGGTGCCTGA < 41bp 1 0.201332741229885 1 0.279732465744019 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179149974 chr5:179149988 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_26844 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:179149983-179150006
64251 chr17 27011938 27011938 1 + A T LUAD 27011928 + 27011908 27011948 41 ACAGACTTCCTTCGACTGCCCCATTTTACCAAACGGCGAAC ACAGACTTCCTTCGACTGCCCCATTTTACCTAACGGCGAAC < 41bp 1 0.06226969988899 1 0.0436770021915436 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011928 chr17:27011938 stopgain 0.998 1 31 hm5C_associated_SNPs_26845 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:27011913-27011938
64251 chr17 27011938 27011938 1 + A T LUAD 27011948 + 27011928 27011968 41 CCATTTTACCAAACGGCGAACTGCATGGAGAGAGGAAGAGC CCATTTTACCTAACGGCGAACTGCATGGAGAGAGGAAGAGC < 41bp 1 0.593448285372857 1 0.747698426246643 experiment 0.813103429254286 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011948 chr17:27011938 stopgain 0.998 1 11 hm5C_associated_SNPs_26846 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:27011913-27011938
64251 chr15 44085915 44085915 1 + G T LUAD 44085898 + 44085878 44085918 41 CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGA CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGTAGA < 41bp 1 0.262958039711397 1 0.0479691326618195 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085898 chr15:44085915 stopgain 1.000 0 38 hm5C_associated_SNPs_26847 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:44085900-44085920
64251 chr15 44085915 44085915 1 + G T LUAD 44085902 + 44085882 44085922 41 CAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGATCAT CAGTGCCCCATCATCTCTACCCCCAGGGACTCGTAGATCAT < 41bp 1 0.325062350921199 1 0.11250913143158 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085902 chr15:44085915 stopgain 1.000 0 34 hm5C_associated_SNPs_26848 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:44085900-44085920
64251 chr6 24423246 24423246 1 + G T LUAD 24423252 + 24423232 24423272 41 TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCCATTGCCT TGCTTTCATTCCTTTGACGACAGCTAGAAGCTCCATTGCCT < 41bp 1 0.49032169671949 1 0.0672610402107239 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423252 chr6:24423246 stopgain 0.995 1 15 hm5C_associated_SNPs_26849 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:24423234-24423265
64251 chr17 48696099 48696099 1 + G A LUAD 48696108 + 48696088 48696128 41 TTCGTGCTGACGGCCCAGTTCGTGCTAGTCAACGTGGTGAT TTCGTGCTGACAGCCCAGTTCGTGCTAGTCAACGTGGTGAT < 41bp 1 0.437542084689656 1 0.105683326721191 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48696108 chr17:48696099 synonymous SNV . 0 12 hm5C_associated_SNPs_26852 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:48696091-48696121
64251 chrX 70613945 70613945 1 + A G LUAD 70613959 + 70613939 70613979 41 TTATCAACTGACACAGACAGCAGCTCAGCTGAAGATAGTGA TTATCAGCTGACACAGACAGCAGCTCAGCTGAAGATAGTGA < 41bp 1 0.0850670894669416 1 0.238472402095795 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAF1 ENSG00000147133 CDS Human protein_coding chrX:70613959 chrX:70613945 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_26853 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chrX:70613925-70613946
64251 chr1 24996713 24996713 1 + C T LUAD 24996696 + 24996676 24996716 41 CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCC CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCTCCC < 41bp 1 0.338356243384341 1 0.125093042850494 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996696 chr1:24996713 synonymous SNV . 0 38 hm5C_associated_SNPs_26854 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996713 24996713 1 + C T LUAD 24996697 + 24996677 24996717 41 TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCTCCCG < 41bp 1 0.624367349678348 1 0.104625046253204 experiment 0.751265300643305 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996697 chr1:24996713 synonymous SNV . 0 37 hm5C_associated_SNPs_26855 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996713 24996713 1 + C T LUAD 24996698 + 24996678 24996718 41 GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCTCCCGT < 41bp 1 0.174288350354584 1 0.0987176597118378 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996698 chr1:24996713 synonymous SNV . 0 36 hm5C_associated_SNPs_26856 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996713 24996713 1 + C T LUAD 24996703 + 24996683 24996723 41 AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT AGCAGCTAAAAAGCCCCCAGCACCTCCATCTCCCGTCCAGT < 41bp 1 0.217021165874596 1 0.0896086990833282 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996703 chr1:24996713 synonymous SNV . 0 31 hm5C_associated_SNPs_26857 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996713 24996713 1 + C T LUAD 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT CAGCTAAAAAGCCCCCAGCACCTCCATCTCCCGTCCAGTCT < 41bp 1 0.0485852193827038 1 0.0169703364372253 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996713 synonymous SNV . 0 29 hm5C_associated_SNPs_26858 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996713 24996713 1 + C T LUAD 24996709 + 24996689 24996729 41 TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT TAAAAAGCCCCCAGCACCTCCATCTCCCGTCCAGTCTCAGT < 41bp 1 0.0815502745162708 1 0.0819051563739777 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996709 chr1:24996713 synonymous SNV . 0 25 hm5C_associated_SNPs_26859 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr14 23778060 23778060 1 + G T LUAD 23778051 + 23778031 23778071 41 TTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGCGCG TTCACAGCTCTATACGGGGACGGGGCCCTTGAGGAGGCGCG < 41bp 1 0.624308711841579 1 0.772989869117737 experiment 0.751382576316841 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCL2L2 ENSG00000129473 CDS Human protein_coding chr14:23778051 chr14:23778060 synonymous SNV . 0 30 hm5C_associated_SNPs_26860 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:23778038-23778060
64251 chr12 98927619 98927619 1 + A T LUAD 98927615 + 98927595 98927635 41 TCCAGTTTCTTCCAGGGAGGCAACACAGATATTATCAGTTC TCCAGTTTCTTCCAGGGAGGCAACTCAGATATTATCAGTTC < 41bp 1 0.202963477512295 1 0.103930860757828 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98927615 chr12:98927619 synonymous SNV . 0 25 hm5C_associated_SNPs_26861 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:98927580-98927620
64251 chr1 228879188 228879188 1 + G T LUAD 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCCTAGTTTGAACGCAGTC < 41bp 1 0.0927150740442737 1 0.262255787849426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879188 stopgain 0.421 1 31 hm5C_associated_SNPs_26864 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:228879180-228879200
64251 chr9 104307066 104307066 1 + G C LUAD 104307070 + 104307050 104307090 41 TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTT TAATCTGATAGTGGAGCAAGCAGTGCAGGAGCTGAACTCTT < 41bp 1 0.335014146813388 1 0.590889394283295 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307070 chr9:104307066 nonsynonymous SNV 0.999 3 17 hm5C_associated_SNPs_26865 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr21 30714991 30714991 1 + G T LUAD 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CTGACCGGCCTCCAGCAGTGCTGCCTCCCTTTGCCAGAGGA < 41bp 1 0.252048753128375 1 0.129277050495148 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714991 nonsynonymous SNV 0.002 1 31 hm5C_associated_SNPs_26867 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30714958-30714992
64251 chr1 154988888 154988888 1 + C G LUAD 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTGAAA < 41bp 1 0.232722388928835 1 0.182248741388321 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988888 synonymous SNV . 0 38 hm5C_associated_SNPs_26868 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:154988854-154988891
64251 chr7 73636006 73636006 1 + C G LUAD 73636001 + 73635981 73636021 41 TGGAGTATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA TGGAGTATTACAACTGGGGGCGGTTGTCGAAGCCCCCAGAA < 41bp 1 0.278405795156804 1 0.217820405960083 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636001 chr7:73636006 nonsynonymous SNV 0.021 0 26 hm5C_associated_SNPs_26869 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636006 73636006 1 + C G LUAD 73636013 + 73635993 73636033 41 ACTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG ACTGGGGGCGGTTGTCGAAGCCCCCAGAAGGTGAGGCGAAG < 41bp 1 0.159701956996446 1 0.225163459777832 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636013 chr7:73636006 nonsynonymous SNV 0.021 0 14 hm5C_associated_SNPs_26870 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636006 73636006 1 + C G LUAD 73636014 + 73635994 73636034 41 CTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG CTGGGGGCGGTTGTCGAAGCCCCCAGAAGGTGAGGCGAAGG < 41bp 1 0.510654408800234 1 0.277088284492493 experiment 0.978691182399532 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636014 chr7:73636006 nonsynonymous SNV 0.021 0 13 hm5C_associated_SNPs_26871 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636006 73636006 1 + C G LUAD 73636015 + 73635995 73636035 41 TGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA TGGGGGCGGTTGTCGAAGCCCCCAGAAGGTGAGGCGAAGGA < 41bp 1 0.254429826422502 1 0.262844771146774 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636015 chr7:73636006 nonsynonymous SNV 0.021 0 12 hm5C_associated_SNPs_26872 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636006 73636006 1 + C G LUAD 73636016 + 73635996 73636036 41 GGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC GGGGGCGGTTGTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC < 41bp 1 0.518321062691334 1 0.400747030973434 experiment 0.963357874617333 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636016 chr7:73636006 nonsynonymous SNV 0.021 0 11 hm5C_associated_SNPs_26873 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636006 73636006 1 + C G LUAD 73636017 + 73635997 73636037 41 GGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA GGGGCGGTTGTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA < 41bp 1 0.674297213143472 1 0.793518602848053 experiment 0.651405573713055 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636017 chr7:73636006 nonsynonymous SNV 0.021 0 10 hm5C_associated_SNPs_26874 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr19 4499589 4499589 1 + G A LUAD 4499598 + 4499578 4499618 41 GAGGCGGTGCAGAAAGTGAACAAGGCTGGGATGGAGAAGGA GAGGCGGTGCAAAAAGTGAACAAGGCTGGGATGGAGAAGGA < 41bp 1 0.706598252967179 1 0.751824021339417 experiment 0.586803494065642 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4499598 chr19:4499589 synonymous SNV 0.142 0 12 hm5C_associated_SNPs_26877 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4499570-4499598
64251 chr18 13056511 13056511 1 + G T LUAD 13056496 + 13056476 13056516 41 ATCCAGCTGTTGCAGGAGAGCCTGTGCAGAACTCTGTGGCT ATCCAGCTGTTGCAGGAGAGCCTGTGCAGAACTCTTTGGCT < 41bp 1 0.129764983315421 1 0.206546545028687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056496 chr18:13056511 nonsynonymous SNV 0.181 0 36 hm5C_associated_SNPs_26878 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr18:13056488-13056529
64251 chr6 30593483 30593483 1 + G T LUAD 30593484 + 30593464 30593504 41 CATCTCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCC CATCTCCAAGAAGAGAGTGTCCCCCCACCTGAGTCAATGCC < 41bp 1 0.148513624773053 1 0.0547684133052826 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593484 chr6:30593483 nonsynonymous SNV 0.993 4 20 hm5C_associated_SNPs_26879 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30593440-30593500
64251 chr11 76892595 76892595 1 + G T LUAD 76892615 + 76892595 76892635 41 GCCTGCCAGGCCAGGAGGGCCAGGCACCTAGTGGCTTTGAG TCCTGCCAGGCCAGGAGGGCCAGGCACCTAGTGGCTTTGAG < 41bp 1 0.258906928458949 1 0.542211592197418 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO7A ENSG00000137474 CDS Human protein_coding chr11:76892615 chr11:76892595 nonsynonymous SNV 0.973 2 1 hm5C_associated_SNPs_26882 0 0 2 EIF3H POSTAR2 ENCODE chr11:76892566-76892614
64251 chrX 12838875 12838875 1 + A G LUAD 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAGACACAA < 41bp 1 0.344119410703447 1 0.0828023850917816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838875 nonsynonymous SNV 0.807 1 35 hm5C_associated_SNPs_26883 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:12838856-12838892
64251 chrX 73046729 73046729 1 - C A LUAD 73046709 - 73046689 73046729 41 GGACAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC TGACAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC < 41bp 1 0.253236010065341 1 0.207433670759201 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046709 chrX:73046729 . . 0 1 hm5C_associated_SNPs_26884 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046729 73046729 1 - C A LUAD 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACCTGTGACAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.187865674847579 1 0.145899832248688 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046729 . . 0 13 hm5C_associated_SNPs_26885 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046729 73046729 1 - C A LUAD 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACCTGTGACAGGACACATGGAAGGCCTAA < 41bp 1 0.669278914625833 1 0.755340218544006 experiment 0.661442170748334 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046729 . . 0 18 hm5C_associated_SNPs_26886 0 0 74 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046730 73046730 1 - C A LUAD 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACCTTGGACAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.183559814471757 1 0.0921216607093811 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046730 . . 0 12 hm5C_associated_SNPs_26896 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046730 73046730 1 - C A LUAD 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACCTTGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.628800660398398 1 0.743398308753967 experiment 0.742398679203205 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046730 . . 0 17 hm5C_associated_SNPs_26897 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 129185893 129185893 1 + A T LUAD 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG ATCCTCCTGGGAGCTCAGATCATGAAGGAGACGATCCGATG < 41bp 1 0.527379124883065 1 0.728589177131653 experiment 0.94524175023387 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185893 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_26898 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chrX:129185892-129185893
64251 chr20 37580937 37580937 1 + T G LUAD 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT GGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT < 41bp 1 0.354648467800093 1 0.163162618875504 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580937 nonsynonymous SNV 0.771 1 1 hm5C_associated_SNPs_26899 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr19 40884020 40884020 1 + T G LUAD 40884016 + 40883996 40884036 41 TTTCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG TTTCCTGAGGGACTGGGACTCCCCGTACAGCCATGACCTTG < 41bp 1 0.64260454070162 1 0.434242725372314 experiment 0.714790918596759 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884016 chr19:40884020 synonymous SNV . 0 25 hm5C_associated_SNPs_26900 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:40883996-40884027
64251 chr19 40884020 40884020 1 + T G LUAD 40884018 + 40883998 40884038 41 TCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC TCCTGAGGGACTGGGACTCCCCGTACAGCCATGACCTTGAC < 41bp 1 0.587588126702957 1 0.343061447143555 experiment 0.824823746594086 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884018 chr19:40884020 synonymous SNV . 0 23 hm5C_associated_SNPs_26901 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:40883996-40884027
64251 chr2 232576109 232576109 1 + G T LUAD 232576092 + 232576072 232576112 41 GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGACGCCC GAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGACTCCC < 41bp 1 0.791668994631512 1 0.747702717781067 experiment 0.416662010736976 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232576092 chr2:232576109 nonsynonymous SNV 0.995 0 38 hm5C_associated_SNPs_26903 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr2 232576109 232576109 1 + G T LUAD 232576110 + 232576090 232576130 41 GGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTG GGCAGAAAATGGAAGAGACTCCCCTGCTAACGGGAATGCTG < 41bp 1 0.30139641999374 1 0.0378052592277527 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576110 chr2:232576109 nonsynonymous SNV 0.995 0 20 hm5C_associated_SNPs_26904 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr2 232576109 232576109 1 + G T LUAD 232576128 + 232576108 232576148 41 CGCCCCTGCTAACGGGAATGCTGTGAGTGTCTGCTTTGCTC CTCCCCTGCTAACGGGAATGCTGTGAGTGTCTGCTTTGCTC < 41bp 1 0.541199534491061 1 0.197065621614456 experiment 0.917600931017879 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576128 chr2:232576109 nonsynonymous SNV 0.995 0 2 hm5C_associated_SNPs_26905 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr12 95877025 95877025 1 + G T LUAD 95877015 + 95876995 95877035 41 AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA AGATGGCGATGGAGATGGAGCAACTGGAAATAAGAAGAAAA < 41bp 1 0.327953889168768 1 0.335973143577576 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877015 chr12:95877025 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_26906 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:95876988-95877032
64251 chr11 66625248 66625248 1 + C A LUAD 66625256 + 66625236 66625276 41 GCTGCTGCTGGCCAGTGGAGCGGCCGCCTGCCCGCTGCCCT GCTGCTGCTGGCAAGTGGAGCGGCCGCCTGCCCGCTGCCCT < 41bp 1 0.452833548301755 1 0.851622104644775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66625256 chr11:66625248 synonymous SNV . 0 13 hm5C_associated_SNPs_26908 0 0 1 GEMIN5 POSTAR2 ENCODE chr11:66625242-66625268
64251 chr14 102478287 102478287 1 + A C LUAD 102478267 + 102478247 102478287 41 TGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCA TGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCC < 41bp 1 0.0274696006266708 1 0.150383681058884 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478267 chr14:102478287 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_26909 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr14:102478286-102478287
64251 chr14 102478287 102478287 1 + A C LUAD 102478270 + 102478250 102478290 41 CCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCATGG CCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCCTGG < 41bp 1 0.748233146660491 1 0.804830431938171 experiment 0.503533706679018 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478270 chr14:102478287 nonsynonymous SNV 0.999 1 38 hm5C_associated_SNPs_26910 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr14:102478286-102478287
64251 chr1 228526024 228526024 1 + G T LUAD 228526010 + 228525990 228526030 41 GCTGTCACCTGAGTGGGGGGCCGCTGAGGCCCCTGAGTTCC GCTGTCACCTGAGTGGGGGGCCGCTGAGGCCCCTTAGTTCC < 41bp 1 0.051900655959123 1 0.45332133769989 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526010 chr1:228526024 stopgain 0.362 1 35 hm5C_associated_SNPs_26911 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526024 228526024 1 + G T LUAD 228526011 + 228525991 228526031 41 CTGTCACCTGAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCC CTGTCACCTGAGTGGGGGGCCGCTGAGGCCCCTTAGTTCCC < 41bp 1 0.0658993180275881 1 0.610836029052734 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526011 chr1:228526024 stopgain 0.362 1 34 hm5C_associated_SNPs_26912 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526024 228526024 1 + G T LUAD 228526019 + 228525999 228526039 41 TGAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGG TGAGTGGGGGGCCGCTGAGGCCCCTTAGTTCCCTGGGGAGG < 41bp 1 0.0570518984668709 1 0.178568124771118 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526019 chr1:228526024 stopgain 0.362 1 26 hm5C_associated_SNPs_26913 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526024 228526024 1 + G T LUAD 228526020 + 228526000 228526040 41 GAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGC GAGTGGGGGGCCGCTGAGGCCCCTTAGTTCCCTGGGGAGGC < 41bp 1 0.0548786093690592 1 0.109577029943466 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526020 chr1:228526024 stopgain 0.362 1 25 hm5C_associated_SNPs_26914 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526024 228526024 1 + G T LUAD 228526021 + 228526001 228526041 41 AGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGCT AGTGGGGGGCCGCTGAGGCCCCTTAGTTCCCTGGGGAGGCT < 41bp 1 0.0467527186070574 1 0.132697582244873 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526021 chr1:228526024 stopgain 0.362 1 24 hm5C_associated_SNPs_26915 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526024 228526024 1 + G T LUAD 228526022 + 228526002 228526042 41 GTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGCTG GTGGGGGGCCGCTGAGGCCCCTTAGTTCCCTGGGGAGGCTG < 41bp 1 0.10348957647696 1 0.0921967625617981 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526022 chr1:228526024 stopgain 0.362 1 23 hm5C_associated_SNPs_26916 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr19 6374306 6374306 1 + C G LUAD 6374323 + 6374303 6374343 41 CCCCGGCCAGACCCTGCTCTCCTCCGTGCACGTGCTGGACC CCCGGGCCAGACCCTGCTCTCCTCCGTGCACGTGCTGGACC < 41bp 1 0.220207046916753 1 0.260754644870758 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALKBH7 ENSG00000125652 CDS Human protein_coding chr19:6374323 chr19:6374306 synonymous SNV . 0 4 hm5C_associated_SNPs_26917 0 0 1 METAP2 POSTAR2 ENCODE chr19:6374296-6374345
64251 chr20 31021429 31021429 1 + G T LUAD 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCCGACCTTGAGGGTCCCGAATTCCCAGTTGAGTCT < 41bp 1 0.484273292502818 1 0.108322203159332 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021429 synonymous SNV . 0 14 hm5C_associated_SNPs_26918 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31021429 31021429 1 + G T LUAD 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCCGACCTTGAGGGTCCCGAATTCCCAGTTGAGTCTG < 41bp 1 0.477591541834307 1 0.320657849311829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021429 synonymous SNV . 0 13 hm5C_associated_SNPs_26919 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr2 32673983 32673983 1 + A C LUAD 32673982 + 32673962 32674002 41 GTCAGATGAAATTGATTTATCAGATGTCCTTTCAGGTAGTG GTCAGATGAAATTGATTTATCCGATGTCCTTTCAGGTAGTG < 41bp 1 0.062067376833789 1 0.195328921079636 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673982 chr2:32673983 synonymous SNV . 0 22 hm5C_associated_SNPs_26920 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673983 32673983 1 + A C LUAD 32673989 + 32673969 32674009 41 GAAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTT GAAATTGATTTATCCGATGTCCTTTCAGGTAGTGATTTCTT < 41bp 1 0.00561837743463024 1 0.0218217074871063 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673989 chr2:32673983 synonymous SNV . 0 15 hm5C_associated_SNPs_26921 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673983 32673983 1 + A C LUAD 32673990 + 32673970 32674010 41 AAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTT AAATTGATTTATCCGATGTCCTTTCAGGTAGTGATTTCTTT < 41bp 1 0.00801060042504494 1 0.0855082273483276 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673990 chr2:32673983 synonymous SNV . 0 14 hm5C_associated_SNPs_26922 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673983 32673983 1 + A C LUAD 32673994 + 32673974 32674014 41 TGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTTTATT TGATTTATCCGATGTCCTTTCAGGTAGTGATTTCTTTTATT < 41bp 1 0.180167271372585 1 0.181774944067001 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673994 chr2:32673983 synonymous SNV . 0 10 hm5C_associated_SNPs_26923 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr3 51673485 51673485 1 + G T LUAD 51673466 + 51673446 51673486 41 CCCTGATGTGCTGTATGAAGCCCTTCAGAAGGAGAGCTTGG CCCTGATGTGCTGTATGAAGCCCTTCAGAAGGAGAGCTTTG < 41bp 1 0.211397944806992 1 0.114360451698303 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51673466 chr3:51673485 nonsynonymous SNV 0.950 3 40 hm5C_associated_SNPs_26924 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:51673447-51673496
64251 chr12 64173835 64173835 1 + G C LUAD 64173833 + 64173813 64173853 41 TACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCCGGCCGG TACCACGTCTTCTTCGGGCGCCCCCGCCAGGCGCCGGCCGG < 41bp 1 0.336719157007447 1 0.0329951345920563 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173833 chr12:64173835 nonsynonymous SNV 0.882 2 23 hm5C_associated_SNPs_26925 0 0 1 DDX3X POSTAR2 ENCODE chr12:64173807-64173911
64251 chr16 57485061 57485061 1 + G T LUAD 57485048 + 57485028 57485068 41 GAAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCATTCTG GAAGCAGCAGCCTCCCAACTCATTTTCTCAGCATCATTCTG < 41bp 1 0.12703681767484 1 0.0459785461425781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57485048 chr16:57485061 nonsynonymous SNV 0.999 0 34 hm5C_associated_SNPs_26926 0 0 1 GRWD1 POSTAR2 ENCODE chr16:57484993-57485109
64251 chr3 127379422 127379422 1 + A G LUAD 127379412 + 127379392 127379432 41 AGAAGGAAGAGGTAGAGAAACAAGAGGAGGAGGAAGAGGAG AGAAGGAAGAGGTAGAGAAACAAGAGGAGGGGGAAGAGGAG < 41bp 1 0.776601414482524 1 0.549613177776337 experiment 0.446797171034953 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379412 chr3:127379422 nonsynonymous SNV 0.764 0 31 hm5C_associated_SNPs_26927 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:127379413-127379446
64251 chr1 163310200 163310200 1 + A G LUAD 163310211 + 163310191 163310231 41 ATATTTCAGAGAAAACCAAGCGTTTGGTAAACATCTTTTCT ATATTTCAGGGAAAACCAAGCGTTTGGTAAACATCTTTTCT < 41bp 1 0.072307581970671 1 0.0905514657497406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163310211 chr1:163310200 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_26928 0 0 2 BUD13 POSTAR2 ENCODE chr1:163310194-163310211
64251 chr9 35389884 35389884 1 + G T LUAD 35389874 + 35389854 35389894 41 ACCTCCAGAGGAACAAGGGCCCAGCATTCGGAACCTGGATT ACCTCCAGAGGAACAAGGGCCCAGCATTCGTAACCTGGATT < 41bp 1 0.0659123875979797 1 0.14843624830246 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UNC13B ENSG00000198722 CDS Human protein_coding chr9:35389874 chr9:35389884 synonymous SNV . 0 31 hm5C_associated_SNPs_26929 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:35389867-35389893
64251 chr5 137680774 137680774 1 + G T LUAD 137680783 + 137680763 137680803 41 GCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGG GCTGGCAGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGG < 41bp 1 0.167272316727122 1 0.363211214542389 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680783 chr5:137680774 nonsynonymous SNV 0.991 0 12 hm5C_associated_SNPs_26930 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680784 + 137680764 137680804 41 CTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGA CTGGCAGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGA < 41bp 1 0.0777785024324397 1 0.149895578622818 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680784 chr5:137680774 nonsynonymous SNV 0.991 0 11 hm5C_associated_SNPs_26931 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680785 + 137680765 137680805 41 TGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGAC TGGCAGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGAC < 41bp 1 0.335786467990211 1 0.560323178768158 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680785 chr5:137680774 nonsynonymous SNV 0.991 0 10 hm5C_associated_SNPs_26932 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680787 + 137680767 137680807 41 GCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTC GCAGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTC < 41bp 1 0.23464508207094 1 0.0618569254875183 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680787 chr5:137680774 nonsynonymous SNV 0.991 0 8 hm5C_associated_SNPs_26933 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680788 + 137680768 137680808 41 CAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCC CAGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCC < 41bp 1 0.151664211923609 1 0.216902434825897 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680788 chr5:137680774 nonsynonymous SNV 0.991 0 7 hm5C_associated_SNPs_26934 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680789 + 137680769 137680809 41 AGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCC AGCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCC < 41bp 1 0.0771230397929036 1 0.0661748051643372 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680789 chr5:137680774 nonsynonymous SNV 0.991 0 6 hm5C_associated_SNPs_26935 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680790 + 137680770 137680810 41 GCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCA GCCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCA < 41bp 1 0.0760738223321842 1 0.182322174310684 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680790 chr5:137680774 nonsynonymous SNV 0.991 0 5 hm5C_associated_SNPs_26936 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680791 + 137680771 137680811 41 CCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCAT CCGTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCAT < 41bp 1 0.786008986893331 1 0.964336752891541 experiment 0.427982026213338 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680791 chr5:137680774 nonsynonymous SNV 0.991 0 4 hm5C_associated_SNPs_26937 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680793 + 137680773 137680813 41 GGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAA GTTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAA < 41bp 1 0.503330107441312 1 0.801402032375336 experiment 0.993339785117377 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680793 chr5:137680774 nonsynonymous SNV 0.991 0 2 hm5C_associated_SNPs_26938 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr5 137680774 137680774 1 + G T LUAD 137680794 + 137680774 137680814 41 GTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAA TTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAA < 41bp 1 0.599462573177636 1 0.465529561042786 experiment 0.801074853644728 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680794 chr5:137680774 nonsynonymous SNV 0.991 0 1 hm5C_associated_SNPs_26939 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr22 32217522 32217522 1 + G C LUAD 32217507 + 32217487 32217527 41 GGGCCATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG GGGCCATCCGGAGAAGCCATCCAGATCCACCACCACACCCG < 41bp 1 0.575306382498349 1 0.662481188774109 experiment 0.849387235003301 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32217507 chr22:32217522 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_26942 0 0 1 PPIG POSTAR2 ENCODE chr22:32217487-32217563
64251 chr1 110134755 110134755 1 + A T LUAD 110134762 + 110134742 110134782 41 GAGATCTATACTCACTTCACCTGTGCCACAGACACGAAGAA GAGATCTATACTCTCTTCACCTGTGCCACAGACACGAAGAA < 41bp 1 0.201613176366988 1 0.463473975658417 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110134762 chr1:110134755 nonsynonymous SNV 0.988 5 14 hm5C_associated_SNPs_26943 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110134694-110134787
64251 chr11 46403644 46403644 1 + G T LUAD 46403637 + 46403617 46403657 41 CGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCT CGAGGCTTCCTCCTCCTCACCCTCCTCTCCCTGCTGGCGCT < 41bp 1 0.0450546319791579 1 0.0429928302764893 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403637 chr11:46403644 nonsynonymous SNV 0.008 0 28 hm5C_associated_SNPs_26944 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403644 46403644 1 + G T LUAD 46403638 + 46403618 46403658 41 GAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTC GAGGCTTCCTCCTCCTCACCCTCCTCTCCCTGCTGGCGCTC < 41bp 1 0.499097322178543 1 0.246678441762924 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403638 chr11:46403644 nonsynonymous SNV 0.008 0 27 hm5C_associated_SNPs_26945 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr11 46403644 46403644 1 + G T LUAD 46403643 + 46403623 46403663 41 TTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTC TTCCTCCTCCTCACCCTCCTCTCCCTGCTGGCGCTCACCTC < 41bp 1 0.513551201536859 1 0.887201905250549 experiment 0.972897596926282 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MDK ENSG00000110492 CDS Human protein_coding chr11:46403643 chr11:46403644 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_26946 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:46403583-46403665
64251 chr17 45748079 45748079 1 + T A LUAD 45748073 + 45748053 45748093 41 CTATGTGCATTTCAGGCTTTCTCCAGTCTGGCTGAAGCTGC CTATGTGCATTTCAGGCTTTCTCCAGACTGGCTGAAGCTGC < 41bp 1 0.726848448830014 1 0.916037678718567 experiment 0.546303102339973 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45748073 chr17:45748079 nonsynonymous SNV 0.963 4 27 hm5C_associated_SNPs_26947 0 0 38 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:45748060-45748080
64251 chr15 25213180 25213180 1 + G T LUAD 25213171 + 25213151 25213191 41 GGCATTCTTAGCTGAGACACCAAGAGGTGGTTAAAGCCATA GGCATTCTTAGCTGAGACACCAAGAGGTGTTTAAAGCCATA < 41bp 1 0.779553295776114 1 0.453191459178925 experiment 0.440893408447772 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNURF ENSG00000214265;ENSG00000273173 CDS Human other chr15:25213171 chr15:25213180 nonsynonymous SNV 0.998 2 30 hm5C_associated_SNPs_26948 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:25213180-25213200
64251 chr2 46607448 46607448 1 + G T LUAD 46607459 + 46607439 46607479 41 GCCCCATCTGCCCCGAGGAGCGGCTCTTGGCGGAGAACCCA GCCCCATCTTCCCCGAGGAGCGGCTCTTGGCGGAGAACCCA < 41bp 1 0.403543106520757 1 0.372088521718979 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607459 chr2:46607448 nonsynonymous SNV 0.997 3 10 hm5C_associated_SNPs_26949 0 0 1 NOL12 POSTAR2 ENCODE chr2:46607401-46607469
64251 chr16 11133682 11133682 1 + C T LUAD 11133688 + 11133668 11133708 41 AGACCACCTACAACCACCCGCTAGCTGAAAGACTCATCAGG AGACCACCTACAACTACCCGCTAGCTGAAAGACTCATCAGG < 41bp 1 0.10903385075541 1 0.238498270511627 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133688 chr16:11133682 nonsynonymous SNV 0.871 1 15 hm5C_associated_SNPs_26950 0 0 1 PPIG POSTAR2 ENCODE chr16:11133647-11133734
64251 chr17 55191939 55191939 1 + G T LUAD 55191920 + 55191900 55191940 41 CACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGC CACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCATC < 41bp 1 0.285503267541843 1 0.0974894464015961 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191920 chr17:55191939 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_26951 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:55191902-55191942
64251 chr2 27448030 27448030 1 + G T LUAD 27448037 + 27448017 27448057 41 TTGAGCTGACCGAGGATCGACGGGCCTTTGCTGCCAGAATG TTGAGCTGACCGATGATCGACGGGCCTTTGCTGCCAGAATG < 41bp 1 0.443304840309377 1 0.5816251039505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448037 chr2:27448030 nonsynonymous SNV 0.111 5 14 hm5C_associated_SNPs_26952 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr2 27448030 27448030 1 + G T LUAD 27448041 + 27448021 27448061 41 GCTGACCGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAG GCTGACCGATGATCGACGGGCCTTTGCTGCCAGAATGGCAG < 41bp 1 0.0129828518496619 1 0.106659084558487 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448041 chr2:27448030 nonsynonymous SNV 0.111 5 10 hm5C_associated_SNPs_26953 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr2 27448030 27448030 1 + G T LUAD 27448047 + 27448027 27448067 41 CGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAGAGATCG CGATGATCGACGGGCCTTTGCTGCCAGAATGGCAGAGATCG < 41bp 1 0.33301586126769 1 0.039919376373291 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448047 chr2:27448030 nonsynonymous SNV 0.111 5 4 hm5C_associated_SNPs_26954 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:27448003-27448055
64251 chr9 133577570 133577570 1 + A T LUAD 133577577 + 133577557 133577597 41 CTGGTGAAACGGCAGAAGACCCACTTTCATGATTTGCCATG CTGGTGAAACGGCTGAAGACCCACTTTCATGATTTGCCATG < 41bp 1 0.327776907245198 1 0.0542184412479401 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133577577 chr9:133577570 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_26955 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:133577560-133577581
64251 chr4 107268722 107268722 1 + G T LUAD 107268727 + 107268707 107268747 41 CTAAGAAGAAGATTTGGGAGCAGATCCAGCCTGATCTTCAC CTAAGAAGAAGATTTTGGAGCAGATCCAGCCTGATCTTCAC < 41bp 1 0.413400445557277 1 0.174658983945847 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107268727 chr4:107268722 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_26956 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:107268689-107268740
64251 chr9 116269720 116269720 1 + G T LUAD 116269708 + 116269688 116269728 41 CCCAACAAACGGGAGAAGAACTGCACCCATGGGGTCCAGGC CCCAACAAACGGGAGAAGAACTGCACCCATGGTGTCCAGGC < 41bp 1 0.784155615491108 1 0.477839082479477 experiment 0.431688769017784 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RGS3 ENSG00000138835 CDS Human protein_coding chr9:116269708 chr9:116269720 synonymous SNV . 0 33 hm5C_associated_SNPs_26957 0 0 1 GRWD1 POSTAR2 ENCODE chr9:116269594-116269747
64251 chr3 169985727 169985727 1 + G T LUAD 169985728 + 169985708 169985748 41 ATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTG ATCTACCGTAGAGGTGCACTCCGCTGGAGAAAGCTTTATTG < 41bp 1 0.528244991658253 1 0.591309249401093 experiment 0.943510016683494 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169985728 chr3:169985727 nonsynonymous SNV 0.985 4 20 hm5C_associated_SNPs_26960 0 0 1 UCHL5 POSTAR2 ENCODE chr3:169985702-169985745
64251 chr16 77232110 77232110 1 + G A LUAD 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGAAAGAGGAGAACCGGCTCTTCATTCGTTACCCA < 41bp 1 0.642747980747102 1 0.3698810338974 experiment 0.714504038505796 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232110 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_26967 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:77232100-77232120
64251 chr1 39927573 39927573 1 + T C LUAD 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTCAGAGATGACTGCTGTGGCTGACATTTTCGACC < 41bp 1 0.130682495559103 1 0.109137505292892 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927573 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_26968 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927560-39927580
64251 chr11 61404802 61404802 1 + G T LUAD 61404820 + 61404800 61404840 41 GAGGGTGTCCGCAATGTTGCCGGTGTCTGTCCGCAGATCCA GATGGTGTCCGCAATGTTGCCGGTGTCTGTCCGCAGATCCA < 41bp 1 0.470689788026269 1 0.71644002199173 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404820 chr11:61404802 . . 0 3 hm5C_associated_SNPs_26969 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:61404764-61404820
64251 chr14 69704367 69704367 1 + G T LUAD 69704365 + 69704345 69704385 41 ACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC ACCACAACTCCCACGATGTGCTTCTGCTCTGCACCTCCTGC < 41bp 1 0.21529457356145 1 0.0327105224132538 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXD2 ENSG00000081177 CDS Human protein_coding chr14:69704365 chr14:69704367 synonymous SNV . 0 23 hm5C_associated_SNPs_26970 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:69704356-69704386
64251 chrX 73045871 73045871 1 - G A LUAD 73045854 - 73045834 73045874 41 TCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGC TCCTAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGC < 41bp 1 0.30977841975009 1 0.500613927841187 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045854 chrX:73045871 . . 0 4 hm5C_associated_SNPs_26972 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045871 73045871 1 - G A LUAD 73045859 - 73045839 73045879 41 CGAGGTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTA CGAGGTCCTAAGGGGACAGCCTGAACTCCCTGCTCATAGTA < 41bp 1 0.426129235152107 1 0.617600202560425 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045859 chrX:73045871 . . 0 9 hm5C_associated_SNPs_26973 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045871 73045871 1 - G A LUAD 73045873 - 73045853 73045893 41 TGCCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT TGCCTGGGACAAAGCGAGGTCCTAAGGGGACAGCCTGAACT < 41bp 1 0.0881340616045856 1 0.137612968683243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045873 chrX:73045871 . . 0 23 hm5C_associated_SNPs_26974 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045871 73045871 1 - G A LUAD 73045890 - 73045870 73045910 41 TATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCCA TATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCTA < 41bp 1 0.726674670861251 1 0.418965756893158 experiment 0.546650658277499 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045890 chrX:73045871 . . 0 40 hm5C_associated_SNPs_26975 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045871 73045871 1 - G A LUAD 73045891 - 73045871 73045911 41 TTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCC TTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCT < 41bp 1 0.287604838864151 1 0.279087007045746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045891 chrX:73045871 . . 0 41 hm5C_associated_SNPs_26976 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr3 53880624 53880624 1 + C T LUAD 53880614 + 53880594 53880634 41 GATCCCGCGCAGTGGCCCGGCGATGTCGCTCGTGCTGCTAA GATCCCGCGCAGTGGCCCGGCGATGTCGCTTGTGCTGCTAA < 41bp 1 0.617081785739095 1 0.445230931043625 experiment 0.76583642852181 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IL17RB ENSG00000056736 CDS Human protein_coding chr3:53880614 chr3:53880624 synonymous SNV . 0 31 hm5C_associated_SNPs_26977 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:53880623-53880624
64251 chr19 11145656 11145656 1 + G T LUAD 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGGAGTAGGACGAGCTCCCCTCGTGGATCATCAAGGAC < 41bp 1 0.0721970144833732 1 0.0903445184230804 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145656 stopgain 0.995 1 9 hm5C_associated_SNPs_26979 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145656 11145656 1 + G T LUAD 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGAGTAGGACGAGCTCCCCTCGTGGATCATCAAGGACG < 41bp 1 0.192915567862767 1 0.174806654453278 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145656 stopgain 0.995 1 8 hm5C_associated_SNPs_26980 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145656 11145656 1 + G T LUAD 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGTAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG < 41bp 1 0.55159672696812 1 0.612375319004059 experiment 0.89680654606376 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145656 stopgain 0.995 1 5 hm5C_associated_SNPs_26981 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145655 11145655 1 + G T LUAD 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGGATGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC < 41bp 1 0.0772295644053792 1 0.0706871747970581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145655 nonsynonymous SNV 0.996 4 8 hm5C_associated_SNPs_26982 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145655 11145655 1 + G T LUAD 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGATGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG < 41bp 1 0.178742711583674 1 0.10011750459671 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145655 nonsynonymous SNV 0.996 4 7 hm5C_associated_SNPs_26983 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145655 11145655 1 + G T LUAD 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGATGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG < 41bp 1 0.589374658344933 1 0.453469425439835 experiment 0.821250683310135 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145655 nonsynonymous SNV 0.996 4 4 hm5C_associated_SNPs_26984 0 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr4 3184081 3184081 1 + G C LUAD 3184095 + 3184075 3184115 41 TTATAGGTGTTGGAGATGTTCATTCTTGTCCTGCAGCAGTG TTATAGCTGTTGGAGATGTTCATTCTTGTCCTGCAGCAGTG < 41bp 1 0.0636055249846866 1 0.0918485522270203 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3184095 chr4:3184081 nonsynonymous SNV 0.919 4 7 hm5C_associated_SNPs_26986 0 0 3 SF3A3 POSTAR2 ENCODE chr4:3184028-3184087
64251 chr1 163310197 163310197 1 + C T LUAD 163310211 + 163310191 163310231 41 ATATTTCAGAGAAAACCAAGCGTTTGGTAAACATCTTTTCT ATATTTTAGAGAAAACCAAGCGTTTGGTAAACATCTTTTCT < 41bp 1 0.0556064990130887 1 0.0537252724170685 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163310211 chr1:163310197 stopgain 1.000 2 7 hm5C_associated_SNPs_26987 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:163310164-163310199
64251 chr1 70700421 70700421 1 + G T LUAD 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CACTGGCTGCTTTGGGGGCTCCTACTCTTTATCCTGCCCTT < 41bp 1 0.289033506374179 1 0.10213178396225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700421 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_26988 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:70700379-70700423
64251 chr6 52269010 52269010 1 + C T LUAD 52269024 + 52269004 52269044 41 TGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG TGCCTGTAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG < 41bp 1 0.29734549134352 1 0.56585031747818 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52269024 chr6:52269010 synonymous SNV . 0 7 hm5C_associated_SNPs_26990 0 0 3 SND1 POSTAR2 ENCODE chr6:52268976-52269045
64251 chr6 52269009 52269009 1 + G C LUAD 52269024 + 52269004 52269044 41 TGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG TGCCTCCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG < 41bp 1 0.285030812596797 1 0.503486514091492 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52269024 chr6:52269009 nonsynonymous SNV 0.219 3 6 hm5C_associated_SNPs_26991 0 0 3 SND1 POSTAR2 ENCODE chr6:52268976-52269045
64251 chr20 39741460 39741460 1 + G A LUAD 39741461 + 39741441 39741481 41 AATACGAGACTGCTCGGCGGCTGAAAAAATGTGTGGACAAG AATACGAGACTGCTCGGCGACTGAAAAAATGTGTGGACAAG < 41bp 1 0.745242478647622 1 0.300104141235352 experiment 0.509515042704756 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741461 chr20:39741460 synonymous SNV . 0 20 hm5C_associated_SNPs_26996 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:39741436-39741462
64251 chr10 7842009 7842009 1 + A T LUAD 7841992 + 7841972 7842012 41 TGTTTTTGTCAATTCTAGGTCTGTCATCTCCTATAAGACAG TGTTTTTGTCAATTCTAGGTCTGTCATCTCCTATAAGTCAG < 41bp 1 0.161480296010834 1 0.0302459001541138 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841992 chr10:7842009 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_26997 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842009 7842009 1 + A T LUAD 7841996 + 7841976 7842016 41 TTTGTCAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGA TTTGTCAATTCTAGGTCTGTCATCTCCTATAAGTCAGAAGA < 41bp 1 0.135889940977562 1 0.145016342401505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841996 chr10:7842009 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_26998 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842009 7842009 1 + A T LUAD 7841999 + 7841979 7842019 41 GTCAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAA GTCAATTCTAGGTCTGTCATCTCCTATAAGTCAGAAGAAAA < 41bp 1 0.404283974889063 1 0.242030799388885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7841999 chr10:7842009 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_26999 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842009 7842009 1 + A T LUAD 7842001 + 7841981 7842021 41 CAATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAAGC CAATTCTAGGTCTGTCATCTCCTATAAGTCAGAAGAAAAGC < 41bp 1 0.0577589198417755 1 0.21217542886734 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7842001 chr10:7842009 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_27000 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr10 7842009 7842009 1 + A T LUAD 7842002 + 7841982 7842022 41 AATTCTAGGTCTGTCATCTCCTATAAGACAGAAGAAAAGCC AATTCTAGGTCTGTCATCTCCTATAAGTCAGAAGAAAAGCC < 41bp 1 0.457246477619073 1 0.561216175556183 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7842002 chr10:7842009 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_27001 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:7841990-7842015
64251 chr20 55088422 55088422 1 + G T LUAD 55088403 + 55088383 55088423 41 TTCCAGGAGGATGATGTCATCATGCTCAATGGCACCAAGGA TTCCAGGAGGATGATGTCATCATGCTCAATGGCACCAAGTA < 41bp 1 0.485559318324679 1 0.587419271469116 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55088403 chr20:55088422 stopgain 0.997 1 40 hm5C_associated_SNPs_27002 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:55088406-55088428
64251 chr20 55088422 55088422 1 + G T LUAD 55088433 + 55088413 55088453 41 GGCACCAAGGAGGATGTGGACGTGCTGAAGACAAGGATGGA GGCACCAAGTAGGATGTGGACGTGCTGAAGACAAGGATGGA < 41bp 1 0.406897338208394 1 0.301292061805725 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55088433 chr20:55088422 stopgain 0.997 1 10 hm5C_associated_SNPs_27003 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:55088406-55088428
64251 chrX 106884134 106884134 1 + C A LUAD 106884139 + 106884119 106884159 41 CCCCTCCATTTAGAGCCGGGCGCCAATCTCAGCCAAGCTTG CCCCTCCATTTAGAGACGGGCGCCAATCTCAGCCAAGCTTG < 41bp 1 0.622928035855964 1 0.217532992362976 experiment 0.754143928288072 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106884139 chrX:106884134 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_27004 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:106884120-106884140
64251 chr19 12902819 12902819 1 + G C LUAD 12902813 + 12902793 12902833 41 TCTGGTCAGGGCTCGGACACCGGCGCGTCTCTCAAGCTCGC TCTGGTCAGGGCTCGGACACCGGCGCCTCTCTCAAGCTCGC < 41bp 1 0.784756476966084 1 0.695629954338074 experiment 0.430487046067831 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12902813 chr19:12902819 synonymous SNV . 0 27 hm5C_associated_SNPs_27005 0 0 2 RBM15 POSTAR2 ENCODE chr19:12902799-12902830
64251 chr19 47422373 47422373 1 + G A LUAD 47422359 + 47422339 47422379 41 CTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAGAAACAA CTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAAAAACAA < 41bp 1 0.794518690000159 1 0.740326046943665 experiment 0.410962619999682 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422359 chr19:47422373 synonymous SNV . 0 35 hm5C_associated_SNPs_27009 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47422336-47422373
64251 chr11 110035186 110035186 1 + C G LUAD 110035177 + 110035157 110035197 41 CATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAG CATGTCTAGAAATACGGCAGCCAAAACTGGAAACGAAGGAG < 41bp 1 0.18446736746345 1 0.374066770076752 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035177 chr11:110035186 nonsynonymous SNV 0.020 0 30 hm5C_associated_SNPs_27010 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:110035178-110035205
64251 chr11 110035186 110035186 1 + C G LUAD 110035178 + 110035158 110035198 41 ATGTCTAGAAATACGGCAGCCAAAACTGCAAACGAAGGAGG ATGTCTAGAAATACGGCAGCCAAAACTGGAAACGAAGGAGG < 41bp 1 0.481214736024744 1 0.493260562419891 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110035178 chr11:110035186 nonsynonymous SNV 0.020 0 29 hm5C_associated_SNPs_27011 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:110035178-110035205
64251 chr11 63585545 63585545 1 + G A LUAD 63585542 + 63585522 63585562 41 AAGAGCAATATCCTGGAGGCCTGGAGTGAAGGGGTGGCCCT AAGAGCAATATCCTGGAGGCCTGAAGTGAAGGGGTGGCCCT < 41bp 1 0.698215649192136 1 0.435242265462875 experiment 0.603568701615729 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C11orf84 ENSG00000168005 CDS Human protein_coding chr11:63585542 chr11:63585545 stopgain 0.995 1 24 hm5C_associated_SNPs_27012 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:63585528-63585570
64251 chrX 70357597 70357597 1 + C T LUAD 70357578 + 70357558 70357598 41 TCTCCTTCTTCCCTCCAGGGCTATACTCCTTATGTTTCTCA TCTCCTTCTTCCCTCCAGGGCTATACTCCTTATGTTTCTTA < 41bp 1 0.105399212756113 1 0.0962234437465668 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70357578 chrX:70357597 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_27013 0 0 1 EFTUD2 POSTAR2 ENCODE chrX:70357531-70357628
64251 chr17 55183940 55183940 1 + C A LUAD 55183945 + 55183925 55183965 41 CGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAGGCCAGTCAG CGGTTGGCAAGGTTGAAGGTCGTGTGTGTCAGGCCAGTCAG < 41bp 1 0.518205171260509 1 0.0609385073184967 experiment 0.963589657478982 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183945 chr17:55183940 nonsynonymous SNV 0.001 1 16 hm5C_associated_SNPs_27024 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr17 55183940 55183940 1 + C A LUAD 55183959 + 55183939 55183979 41 GCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA GAAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA < 41bp 1 0.174853631871468 1 0.05046746134758 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183959 chr17:55183940 nonsynonymous SNV 0.001 1 2 hm5C_associated_SNPs_27025 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr19 41811594 41811594 1 + A C LUAD 41811578 + 41811558 41811598 41 GCTTTTTTCCCTCCACTTTCCAGCCGAGTTACAGCCAGCCA GCTTTTTTCCCTCCACTTTCCAGCCGAGTTACAGCCCGCCA < 41bp 1 0.321462326453372 1 0.717169046401978 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41811578 chr19:41811594 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_27026 0 0 12 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:41811553-41811615
64251 chr17 55183939 55183939 1 + G T LUAD 55183945 + 55183925 55183965 41 CGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAGGCCAGTCAG CGGTTGGCAAGGTTTCAGGTCGTGTGTGTCAGGCCAGTCAG < 41bp 1 0.491878579539777 1 0.0606893002986908 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183945 chr17:55183939 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_27027 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr17 55183939 55183939 1 + G T LUAD 55183959 + 55183939 55183979 41 GCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA TCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA < 41bp 1 0.18528017367758 1 0.0471654534339905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183959 chr17:55183939 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_27028 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:55183924-55183946
64251 chr3 184042135 184042135 1 + G A LUAD 184042134 + 184042114 184042154 41 AGAGATGGATGAAGCTGCTACGGTGAGAGAAAACCCACTAT AGAGATGGATGAAGCTGCTACAGTGAGAGAAAACCCACTAT < 41bp 1 0.301461502876904 1 0.333896815776825 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042134 chr3:184042135 synonymous SNV . 0 22 hm5C_associated_SNPs_27029 0 0 19 DDX59 POSTAR2 ENCODE chr3:184042094-184042136
64251 chr12 57627019 57627019 1 + G T LUAD 57627007 + 57626987 57627027 41 AGGGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGATCC AGGGGTGAAGGCTGTGGACCCCAAGACTGGCCTGGAGATCC < 41bp 1 0.349220406017921 1 0.407606184482574 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627007 chr12:57627019 nonsynonymous SNV 0.993 1 33 hm5C_associated_SNPs_27030 0 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:57626962-57627041
64251 chr19 19646177 19646177 1 + G A LUAD 19646174 + 19646154 19646194 41 ACCCACCATCTTCTACCCCACACGCTCGCTGGACCTGCTGC ACCCACCATCTTCTACCCCACACACTCGCTGGACCTGCTGC < 41bp 1 0.153952043906819 1 0.0359931886196136 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19646174 chr19:19646177 nonsynonymous SNV 0.042 4 24 hm5C_associated_SNPs_27031 0 0 2 EWSR1 POSTAR2 SRX029343 chr19:19646152-19646177
64251 chr14 53173934 53173934 1 + C T LUAD 53173926 + 53173906 53173946 41 CCGGCATCCCCTATGAGAGACGGCTTCTCATCATGGCGGAC CCGGCATCCCCTATGAGAGACGGCTTCTTATCATGGCGGAC < 41bp 1 0.543499568571479 1 0.287674903869629 experiment 0.913000862857042 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53173926 chr14:53173934 synonymous SNV . 0 29 hm5C_associated_SNPs_27033 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:53173920-53173940
64251 chr19 33202801 33202801 1 + G T LUAD 33202807 + 33202787 33202827 41 ATATCCACGTGACTGTTCAGCCAAAGTATAAACACGTTTAT ATATCCACGTGACTTTTCAGCCAAAGTATAAACACGTTTAT < 41bp 1 0.313025081039413 1 0.0903228521347046 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33202807 chr19:33202801 nonsynonymous SNV 0.031 1 15 hm5C_associated_SNPs_27038 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33202688-33202963
64251 chr3 20019840 20019840 1 + C T LUAD 20019825 + 20019805 20019845 41 GCACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA GCACAGTCCTATGCAGATGACAATAGTTTATTATTTATGGA < 41bp 1 0.417062767012704 1 0.0817316472530365 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019825 chr3:20019840 synonymous SNV . 0 36 hm5C_associated_SNPs_27041 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:20019820-20019840
64251 chr19 18975033 18975033 1 + G T LUAD 18975023 + 18975003 18975043 41 ATGTATGATGCCCGGGAGGCCATCATCCCAGGCTCCGTCTA ATGTATGATGCCCGGGAGGCCATCATCCCATGCTCCGTCTA < 41bp 1 0.470061761865101 1 0.0767872333526611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18975023 chr19:18975033 nonsynonymous SNV 0.904 5 31 hm5C_associated_SNPs_27042 0 0 3 DDX24 POSTAR2 ENCODE chr19:18975000-18975062
64251 chr17 74383634 74383634 1 + C G LUAD 74383622 + 74383602 74383642 41 GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGAT GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCGCAGCAGAT < 41bp 1 0.574574136924236 1 0.657870173454285 experiment 0.850851726151528 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383622 chr17:74383634 synonymous SNV . 0 33 hm5C_associated_SNPs_27044 0 0 3 DDX3X POSTAR2 ENCODE chr17:74383593-74383634
64251 chr5 33459940 33459940 1 + G A LUAD 33459929 + 33459909 33459949 41 CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACCCATG CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTAAAACCCATG < 41bp 1 0.484530907690159 1 0.108267515897751 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33459929 chr5:33459940 synonymous SNV . 0 32 hm5C_associated_SNPs_27046 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:33459846-33459962
64251 chr19 17424908 17424908 1 + C G LUAD 17424890 + 17424870 17424910 41 CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGCCT CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGGCT < 41bp 1 0.172772720291872 1 0.178418874740601 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424890 chr19:17424908 nonsynonymous SNV 0.998 1 39 hm5C_associated_SNPs_27047 0 0 1 SF3B1 POSTAR2 ENCODE chr19:17424883-17424925
64251 chr1 168014234 168014234 1 + C G LUAD 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TTGATCGCTCTTGTGGGGTTCCAGAAGAATGTGCTTCATCT < 41bp 1 0.383648162194967 1 0.469597429037094 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014234 nonsynonymous SNV 0.085 1 31 hm5C_associated_SNPs_27048 0 0 5 GRWD1 POSTAR2 ENCODE chr1:168014221-168014295
64251 chr4 183601753 183601753 1 + G T LUAD 183601733 + 183601713 183601753 41 TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTG TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTT < 41bp 1 0.775735606024107 1 0.990226030349731 experiment 0.448528787951786 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183601733 chr4:183601753 nonsynonymous SNV 0.989 3 41 hm5C_associated_SNPs_27049 0 0 6 TAF15 POSTAR2 SRX029345 chr4:183601740-183601760
64251 chr6 107956353 107956353 1 + G C LUAD 107956346 + 107956326 107956366 41 CCTGAGGAACCGGCGGTGAGCGAGCTAGAGTCGGTCAAGGA CCTGAGGAACCGGCGGTGAGCGAGCTACAGTCGGTCAAGGA < 41bp 1 0.513806145848064 1 0.447559267282486 experiment 0.972387708303873 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SOBP ENSG00000112320 CDS Human protein_coding chr6:107956346 chr6:107956353 nonsynonymous SNV 0.980 3 28 hm5C_associated_SNPs_27050 0 0 1 EIF3H POSTAR2 ENCODE chr6:107956350-107956479
64251 chr1 144014034 144014034 1 + G T LUAD 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTTGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC < 41bp 1 0.151996489479547 1 0.163876324892044 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014034 . . 0 5 hm5C_associated_SNPs_27051 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:144014014-144014041
64251 chr1 144014034 144014034 1 + G T LUAD 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTTGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG < 41bp 1 0.275289314461071 1 0.420626223087311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014034 . . 0 3 hm5C_associated_SNPs_27052 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:144014014-144014041
64251 chr14 23239013 23239013 1 + C G LUAD 23239030 + 23239010 23239050 41 TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC TGCGCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC < 41bp 1 0.312826232619766 1 0.0326271653175354 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239030 chr14:23239013 synonymous SNV . 0 4 hm5C_associated_SNPs_27053 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:23238997-23239035
64251 chrX 103431193 103431193 1 + G T LUAD 103431198 + 103431178 103431218 41 CTGAGATGGGTCTTCGGGAGCAACTTGATATTATTAAGATC CTGAGATGGGTCTTCTGGAGCAACTTGATATTATTAAGATC < 41bp 1 0.296363930183024 1 0.195012718439102 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103431198 chrX:103431193 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_27056 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:103431147-103431205
64251 chr1 203816441 203816441 1 + C T LUAD 203816460 + 203816440 203816480 41 TCTACTTCAGGAGCAAGAAGCTCCTCCACTATCCGTATCAA TTTACTTCAGGAGCAAGAAGCTCCTCCACTATCCGTATCAA < 41bp 1 0.30837558245722 1 0.236208736896515 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203816460 chr1:203816441 nonsynonymous SNV 0.953 0 2 hm5C_associated_SNPs_27057 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:203816425-203816457
64251 chr17 65822303 65822303 1 + A G LUAD 65822287 + 65822267 65822307 41 GAGGAGGAGGAGGAGGAGGACGGCGACGCCGAGGAGACCCA GAGGAGGAGGAGGAGGAGGACGGCGACGCCGAGGAGGCCCA < 41bp 1 0.735559072194056 1 0.806582927703857 experiment 0.528881855611888 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822287 chr17:65822303 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_27059 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822293 + 65822273 65822313 41 GAGGAGGAGGAGGACGGCGACGCCGAGGAGACCCAGGATTC GAGGAGGAGGAGGACGGCGACGCCGAGGAGGCCCAGGATTC < 41bp 1 0.667184817235918 1 0.493131726980209 experiment 0.665630365528164 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822293 chr17:65822303 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_27060 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822295 + 65822275 65822315 41 GGAGGAGGAGGACGGCGACGCCGAGGAGACCCAGGATTCTG GGAGGAGGAGGACGGCGACGCCGAGGAGGCCCAGGATTCTG < 41bp 1 0.497227946678036 1 0.512765884399414 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822295 chr17:65822303 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_27061 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822296 + 65822276 65822316 41 GAGGAGGAGGACGGCGACGCCGAGGAGACCCAGGATTCTGA GAGGAGGAGGACGGCGACGCCGAGGAGGCCCAGGATTCTGA < 41bp 1 0.721989334594372 1 0.855281889438629 experiment 0.556021330811255 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822296 chr17:65822303 nonsynonymous SNV 1.000 0 28 hm5C_associated_SNPs_27062 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822304 + 65822284 65822324 41 GGACGGCGACGCCGAGGAGACCCAGGATTCTGAGGACGACG GGACGGCGACGCCGAGGAGGCCCAGGATTCTGAGGACGACG < 41bp 1 0.276711045446202 1 0.0745795667171478 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822304 chr17:65822303 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_27063 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822305 + 65822285 65822325 41 GACGGCGACGCCGAGGAGACCCAGGATTCTGAGGACGACGA GACGGCGACGCCGAGGAGGCCCAGGATTCTGAGGACGACGA < 41bp 1 0.358786109099626 1 0.250952690839767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822305 chr17:65822303 nonsynonymous SNV 1.000 0 19 hm5C_associated_SNPs_27064 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822313 + 65822293 65822333 41 CGCCGAGGAGACCCAGGATTCTGAGGACGACGAGGAGGATG CGCCGAGGAGGCCCAGGATTCTGAGGACGACGAGGAGGATG < 41bp 1 0.756157366726636 1 0.773078799247742 experiment 0.487685266546727 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822313 chr17:65822303 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_27065 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822320 + 65822300 65822340 41 GAGACCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGA GAGGCCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGA < 41bp 1 0.317899818648843 1 0.416222155094147 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BPTF ENSG00000171634 CDS Human protein_coding chr17:65822320 chr17:65822303 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_27066 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr17 65822303 65822303 1 + A G LUAD 65822323 + 65822303 65822343 41 ACCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGAAGA GCCCAGGATTCTGAGGACGACGAGGAGGATGAGATGGAAGA < 41bp 1 0.567964528321723 1 0.72292172908783 experiment 0.864070943356554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822323 chr17:65822303 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_27067 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65822280-65822340
64251 chr19 19645921 19645921 1 + G T LUAD 19645936 + 19645916 19645956 41 CAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA CAGTGTGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA < 41bp 1 0.746813272434551 1 0.511462986469269 experiment 0.506373455130898 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19645936 chr19:19645921 nonsynonymous SNV 0.993 4 6 hm5C_associated_SNPs_27069 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:19645906-19645954
64251 chr11 34978962 34978962 1 + G T LUAD 34978967 + 34978947 34978987 41 AAAATATACGGCTAGGTTCACTAATTGGTTTGATAGTAGAA AAAATATACGGCTAGTTTCACTAATTGGTTTGATAGTAGAA < 41bp 1 0.0888236911440771 1 0.145784378051758 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34978967 chr11:34978962 nonsynonymous SNV 0.980 4 16 hm5C_associated_SNPs_27071 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr11:34978944-34978973
64251 chr10 96341154 96341154 1 + G A LUAD 96341151 + 96341131 96341171 41 AATATGAAGTGCCGTCTAATCAGGGAGTTAAAACGATTCAA AATATGAAGTGCCGTCTAATCAGAGAGTTAAAACGATTCAA < 41bp 1 0.775566024708108 1 0.77959942817688 experiment 0.448867950583785 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HELLS ENSG00000119969 CDS Human protein_coding chr10:96341151 chr10:96341154 synonymous SNV . 0 24 hm5C_associated_SNPs_27072 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:96341080-96341231
64251 chr7 2686562 2686562 1 + T A LUAD 2686570 + 2686550 2686590 41 TTCTACTCCTTCTGGCTGTGCTGCCGGCGGCGCAAGAGCGA TTCTACTCCTTCAGGCTGTGCTGCCGGCGGCGCAAGAGCGA < 41bp 1 0.33599758110703 1 0.255390524864197 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686570 chr7:2686562 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_27073 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2686517-2686568
64251 chr1 16778419 16778419 1 + A T LUAD 16778415 + 16778395 16778435 41 GCTGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCA GCTGAGCCTGCTTCCCCCTCCCCCTGGGGGGAAAACCTCCA < 41bp 1 0.390311490599749 1 0.154043793678284 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778415 chr1:16778419 synonymous SNV . 0 25 hm5C_associated_SNPs_27074 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778419 16778419 1 + A T LUAD 16778416 + 16778396 16778436 41 CTGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCAC CTGAGCCTGCTTCCCCCTCCCCCTGGGGGGAAAACCTCCAC < 41bp 1 0.558686122455174 1 0.350363343954086 experiment 0.882627755089653 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778416 chr1:16778419 synonymous SNV . 0 24 hm5C_associated_SNPs_27075 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778419 16778419 1 + A T LUAD 16778417 + 16778397 16778437 41 TGAGCCTGCTTCCCCCTCCCCCAGGGGGGAAAACCTCCACC TGAGCCTGCTTCCCCCTCCCCCTGGGGGGAAAACCTCCACC < 41bp 1 0.522302020805099 1 0.392767071723938 experiment 0.955395958389803 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778417 chr1:16778419 synonymous SNV . 0 23 hm5C_associated_SNPs_27076 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 214832271 214832271 1 + G T LUAD 214832258 + 214832238 214832278 41 GAAGAACAACCATGGCAACTCGGACCAGCCCCCGCCTGGCT GAAGAACAACCATGGCAACTCGGACCAGCCCCCTCCTGGCT < 41bp 1 0.335543981880746 1 0.200799584388733 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214832258 chr1:214832271 nonsynonymous SNV 0.874 3 34 hm5C_associated_SNPs_27081 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:214832223-214832271
64251 chr11 118344408 118344408 1 + C T LUAD 118344404 + 118344384 118344424 41 CTTGGTTTACCCCAGGCTCTCAGACTGAAAGAGGGAGAAAT CTTGGTTTACCCCAGGCTCTCAGATTGAAAGAGGGAGAAAT < 41bp 1 0.18331737855985 1 0.840421378612518 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344404 chr11:118344408 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_27082 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:118344394-118344415
64251 chr2 54858612 54858612 1 + G T LUAD 54858614 + 54858594 54858634 41 ACATGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGA ACATGTTTCTGCGGCAGCTGCTGCAGGCCCTGGACACTGGA < 41bp 1 0.675390426339492 1 0.576643347740173 experiment 0.649219147321016 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858614 chr2:54858612 nonsynonymous SNV 0.994 4 19 hm5C_associated_SNPs_27083 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858612 54858612 1 + G T LUAD 54858617 + 54858597 54858637 41 TGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGG TGTTTCTGCGGCAGCTGCTGCAGGCCCTGGACACTGGATGG < 41bp 1 0.310781207396343 1 0.58372974395752 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858617 chr2:54858612 nonsynonymous SNV 0.994 4 16 hm5C_associated_SNPs_27084 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858612 54858612 1 + G T LUAD 54858621 + 54858601 54858641 41 TCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGGAACG TCTGCGGCAGCTGCTGCAGGCCCTGGACACTGGATGGAACG < 41bp 1 0.136586491173886 1 0.0876924991607666 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858621 chr2:54858612 nonsynonymous SNV 0.994 4 12 hm5C_associated_SNPs_27085 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858612 54858612 1 + G T LUAD 54858628 + 54858608 54858648 41 CAGCGGCTGCAGGCCCTGGACACTGGATGGAACGAGCTCCA CAGCTGCTGCAGGCCCTGGACACTGGATGGAACGAGCTCCA < 41bp 1 0.356427176175424 1 0.350538909435272 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858628 chr2:54858612 nonsynonymous SNV 0.994 4 5 hm5C_associated_SNPs_27086 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr16 30081487 30081487 1 + G T LUAD 30081505 + 30081485 30081525 41 TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG TGTGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG < 41bp 1 0.0721557309640221 1 0.0471870005130768 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081505 chr16:30081487 nonsynonymous SNV 0.725 3 3 hm5C_associated_SNPs_27087 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr16 30081487 30081487 1 + G T LUAD 30081506 + 30081486 30081526 41 GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC GTGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC < 41bp 1 0.0621827687525191 1 0.0591294467449188 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081506 chr16:30081487 nonsynonymous SNV 0.725 3 2 hm5C_associated_SNPs_27088 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr16 30081487 30081487 1 + G T LUAD 30081507 + 30081487 30081527 41 GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC TGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC < 41bp 1 0.176746160341164 1 0.064243346452713 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081507 chr16:30081487 nonsynonymous SNV 0.725 3 1 hm5C_associated_SNPs_27089 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr4 30725906 30725906 1 + G C LUAD 30725920 + 30725900 30725940 41 CACTGTGGAGGCTTCTAAGCCAAATGGACAGAGGTATGATA CACTGTCGAGGCTTCTAAGCCAAATGGACAGAGGTATGATA < 41bp 1 0.119307876951039 1 0.680407762527466 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725920 chr4:30725906 synonymous SNV . 0 7 hm5C_associated_SNPs_27099 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30725866-30725952
64251 chr1 39910445 39910445 1 + C T LUAD 39910457 + 39910437 39910477 41 AGACAGAACAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT AGACAGAATAGAGTGTAGCACTTTTGGAGCAGAAGTGGCAT < 41bp 1 0.0640951019799832 1 0.0401722490787506 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39910457 chr1:39910445 stopgain 0.999 1 9 hm5C_associated_SNPs_27100 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:39910440-39910460
64251 chr10 43289422 43289422 1 + G A LUAD 43289408 + 43289388 43289428 41 CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAGGATATA CGCTGTTTTCTGATTCCAAGCCACTTGGGTCAGAAGATATA < 41bp 1 0.103683744325604 1 0.0540798008441925 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43289408 chr10:43289422 synonymous SNV . 0 35 hm5C_associated_SNPs_27101 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43289366-43289432
64251 chrX 107821201 107821201 1 + G T LUAD 107821198 + 107821178 107821218 41 TTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGG TTAGGGCCCTCCTGGTCCACCAGTACTTCCAGGACCTAAGG < 41bp 1 0.174956892549686 1 0.361010700464249 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821198 chrX:107821201 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_27103 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chrX 107821201 107821201 1 + G T LUAD 107821203 + 107821183 107821223 41 GCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATT GCCCTCCTGGTCCACCAGTACTTCCAGGACCTAAGGTAATT < 41bp 1 0.0388595622914353 1 0.0269274413585663 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821203 chrX:107821201 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_27104 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chr8 22475291 22475291 1 + G C LUAD 22475273 + 22475253 22475293 41 AACCAGTCAGAGATGGAGTTCTCTTCACTTCAGGACATGGT AACCAGTCAGAGATGGAGTTCTCTTCACTTCAGGACATCGT < 41bp 1 0.0709543511019348 1 0.0950185656547546 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22475273 chr8:22475291 nonsynonymous SNV 0.998 2 39 hm5C_associated_SNPs_27105 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22475235-22475291
64251 chr22 21272460 21272460 1 + C G LUAD 21272448 + 21272428 21272468 41 GCCGTTTTAAGATCGGGGACCAGGAATTTGACCATTTGCCG GCCGTTTTAAGATCGGGGACCAGGAATTTGACGATTTGCCG < 41bp 1 0.78761043553311 1 0.768723964691162 experiment 0.42477912893378 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21272448 chr22:21272460 nonsynonymous SNV 0.990 1 33 hm5C_associated_SNPs_27108 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:21272410-21272461
64251 chr3 25542757 25542757 1 + A G LUAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGGATCGATGCCAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.241625432889814 1 0.0905558466911316 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542757 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_27111 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr3 48506022 48506022 1 + G T LUAD 48506023 + 48506003 48506043 41 TTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC TTGGTGTGCAGAGCCCCTTTCCCCCAGTCACTGGCTCCAAC < 41bp 1 0.139707570452209 1 0.0980057418346405 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506023 chr3:48506022 nonsynonymous SNV 0.149 0 20 hm5C_associated_SNPs_27114 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506022 48506022 1 + G T LUAD 48506024 + 48506004 48506044 41 TGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACT TGGTGTGCAGAGCCCCTTTCCCCCAGTCACTGGCTCCAACT < 41bp 1 0.4603127032506 1 0.549074828624725 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506024 chr3:48506022 nonsynonymous SNV 0.149 0 19 hm5C_associated_SNPs_27115 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506022 48506022 1 + G T LUAD 48506025 + 48506005 48506045 41 GGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTG GGTGTGCAGAGCCCCTTTCCCCCAGTCACTGGCTCCAACTG < 41bp 1 0.383169281409768 1 0.0660290420055389 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506025 chr3:48506022 nonsynonymous SNV 0.149 0 18 hm5C_associated_SNPs_27116 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506022 48506022 1 + G T LUAD 48506026 + 48506006 48506046 41 GTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGC GTGTGCAGAGCCCCTTTCCCCCAGTCACTGGCTCCAACTGC < 41bp 1 0.373741383793443 1 0.0919609069824219 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506026 chr3:48506022 nonsynonymous SNV 0.149 0 17 hm5C_associated_SNPs_27117 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506022 48506022 1 + G T LUAD 48506027 + 48506007 48506047 41 TGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCC TGTGCAGAGCCCCTTTCCCCCAGTCACTGGCTCCAACTGCC < 41bp 1 0.252567781736458 1 0.114312827587128 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506027 chr3:48506022 nonsynonymous SNV 0.149 0 16 hm5C_associated_SNPs_27118 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chrX 73046905 73046905 1 - C A LUAD 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC GATGGTTTTAGACTTGAGACCCGAGGACTAAGATGGAAAGC < 41bp 1 0.161872453546256 1 0.290425658226013 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046905 . . 0 9 hm5C_associated_SNPs_27119 0 0 71 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73046905 73046905 1 - C A LUAD 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG AGATGGTTTTAGACTTGAGACCCGAGGACTAAGATGGAAAG < 41bp 1 0.409409242359587 1 0.152937978506088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046905 . . 0 10 hm5C_associated_SNPs_27120 0 0 71 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73046905 73046905 1 - C A LUAD 73046915 - 73046895 73046935 41 AGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAGA AGAAGGCCCAAAGTATAAGACAGATGGTTTTAGACTTGAGA < 41bp 1 0.146666130361763 1 0.252923727035522 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046915 chrX:73046905 . . 0 31 hm5C_associated_SNPs_27121 0 0 71 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr9 35792589 35792589 1 + G T LUAD 35792598 + 35792578 35792618 41 GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG GGGCACTGCCCTTGGACCTGCGGTTTGTCAGCTCCGAACTG < 41bp 1 0.478694492875255 1 0.290164977312088 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792598 chr9:35792589 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_27122 0 0 2 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr6 110059615 110059615 1 + A G LUAD 110059608 + 110059588 110059628 41 ATATAATTAAAAGTACTGTGCATCGTGACTGGCTTTTGTAT ATATAATTAAAAGTACTGTGCATCGTGGCTGGCTTTTGTAT < 41bp 1 0.104132474413674 1 0.0604777336120605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FIG4 ENSG00000112367 CDS Human protein_coding chr6:110059608 chr6:110059615 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_27123 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:110059569-110059658
64251 chr19 47491246 47491246 1 + G T LUAD 47491265 + 47491245 47491285 41 GGACTGAGCACGGAAGGCATCTACCGGGTCAGCGGGAACAA GTACTGAGCACGGAAGGCATCTACCGGGTCAGCGGGAACAA < 41bp 1 0.356904066349918 1 0.333994686603546 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491265 chr19:47491246 nonsynonymous SNV 0.524 4 2 hm5C_associated_SNPs_27126 0 0 6 EFTUD2 POSTAR2 ENCODE chr19:47491233-47491327
64251 chr3 49713158 49713158 1 + A G LUAD 49713144 + 49713124 49713164 41 CAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCATGAAAG CAGACTGCTGAGCAGAGAGTCTCCTTCAGGCACCGTGAAAG < 41bp 1 0.324421664952029 1 0.21526312828064 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49713144 chr3:49713158 nonsynonymous SNV 0.988 0 35 hm5C_associated_SNPs_27145 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49713140-49713160
64251 chr20 57484830 57484830 1 + G T LUAD 57484828 + 57484808 57484848 41 CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC CCAACCGCCTGCAGGAGGCTCTTAACCTCTTCAAGAGCATC < 41bp 1 0.147692767658799 1 0.125832378864288 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GNAS ENSG00000087460 CDS Human protein_coding chr20:57484828 chr20:57484830 synonymous SNV . 0 23 hm5C_associated_SNPs_27146 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57484779-57484852
64251 chr9 4662873 4662873 1 + G C LUAD 4662857 + 4662837 4662877 41 GTGCAGGAGCGACAGCTGGGCCGGGCGCGAGGTGCTGATGA GTGCAGGAGCGACAGCTGGGCCGGGCGCGAGGTGCTCATGA < 41bp 1 0.79495661182779 1 0.731772303581238 experiment 0.41008677634442 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4662857 chr9:4662873 synonymous SNV . 0 37 hm5C_associated_SNPs_27147 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:4662873-4662874
64251 chr8 145727030 145727030 1 + C A LUAD 145727024 + 145727004 145727044 41 GCTGAGCCCCCTGGACAGCACCACCCCCCACACCCTGGTCC GCTGAGCCCCCTGGACAGCACCACCCACCACACCCTGGTCC < 41bp 1 0.150555218914279 1 0.053245335817337 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727024 chr8:145727030 nonsynonymous SNV 0.000 1 27 hm5C_associated_SNPs_27148 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr17 7155850 7155850 1 + G T LUAD 7155860 + 7155840 7155880 41 GCCAGAGCAGGGACCGGACGCGAGTTGGAGATGTTGGACTC GCCAGAGCAGTGACCGGACGCGAGTTGGAGATGTTGGACTC < 41bp 1 0.786642850967164 1 0.722764253616333 experiment 0.426714298065671 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7155860 chr17:7155850 nonsynonymous SNV 0.000 1 11 hm5C_associated_SNPs_27149 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7155840-7155860
64251 chr2 27280267 27280267 1 + G T LUAD 27280287 + 27280267 27280307 41 GGCTTTCCCCTCCAGATACACTGTGGAACTATTTGAGCAGG TGCTTTCCCCTCCAGATACACTGTGGAACTATTTGAGCAGG < 41bp 1 0.527419802490711 1 0.312748491764069 experiment 0.945160395018578 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280287 chr2:27280267 synonymous SNV . 0 1 hm5C_associated_SNPs_27152 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27280237-27280281
64251 chr20 11900381 11900381 1 + G T LUAD 11900386 + 11900366 11900406 41 TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCGATGTT TATGTTTTAGCTGTTTGGAGCTCTGTGTTCCATGCGATGTT < 41bp 1 0.188567692844188 1 0.120908200740814 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11900386 chr20:11900381 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_27157 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:11900373-11900396
64251 chr19 11105642 11105642 1 + G T LUAD 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACTAGCGG < 41bp 1 0.618162834106972 1 0.733420372009277 experiment 0.763674331786055 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105642 stopgain 0.030 1 36 hm5C_associated_SNPs_27158 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:11105641-11105673
64251 chr19 46509878 46509878 1 + G T LUAD 46509891 + 46509871 46509911 41 CGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC CGGAACCTCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC < 41bp 1 0.0941541375307178 1 0.0712307393550873 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509891 chr19:46509878 nonsynonymous SNV 0.944 1 8 hm5C_associated_SNPs_27160 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr19 46509878 46509878 1 + G T LUAD 46509892 + 46509872 46509912 41 GGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC GGAACCTCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC < 41bp 1 0.238829697320037 1 0.0577437579631805 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509892 chr19:46509878 nonsynonymous SNV 0.944 1 7 hm5C_associated_SNPs_27161 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr11 95546154 95546154 1 + G C LUAD 95546139 + 95546119 95546159 41 CTTCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCA CTTCAAGATAAGATTCGACGCTTGGAACTTGAGAGCATTCA < 41bp 1 0.482647014289044 1 0.0600002408027649 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95546139 chr11:95546154 nonsynonymous SNV 0.997 4 36 hm5C_associated_SNPs_27164 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:95546121-95546159
64251 chr14 75360058 75360058 1 + A T LUAD 75360054 + 75360034 75360074 41 CCTCTTTTCATTTTCAGTGTCTGCAGTAAAACCCACTGTTG CCTCTTTTCATTTTCAGTGTCTGCTGTAAAACCCACTGTTG < 41bp 1 0.588688467477529 1 0.0855450928211212 experiment 0.822623065044942 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DLST ENSG00000119689 CDS Human protein_coding chr14:75360054 chr14:75360058 synonymous SNV . 0 25 hm5C_associated_SNPs_27165 0 0 1 RPS3 POSTAR2 ENCODE chr14:75360056-75360113
64251 chr7 134215412 134215412 1 + G T LUAD 134215396 + 134215376 134215416 41 CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTGAAAG CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTTAAAG < 41bp 1 0.234443481968895 1 0.292027294635773 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134215396 chr7:134215412 synonymous SNV . 0 37 hm5C_associated_SNPs_27166 0 0 1 RPS3 POSTAR2 ENCODE chr7:134215403-134215440
64251 chr19 7589950 7589950 1 + C G LUAD 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTGAAATAC < 41bp 1 0.30935363809214 1 0.15230792760849 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589950 synonymous SNV . 0 35 hm5C_associated_SNPs_27167 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7589933-7589965
64251 chr2 32897384 32897384 1 + G C LUAD 32897396 + 32897376 32897416 41 TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG TAAAGTTACCAGATTGTGAACAGTTCCAGATGCCGGATCTG < 41bp 1 0.154552084250776 1 0.147445827722549 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32897396 chr2:32897384 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_27168 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32897348-32897444
64251 chr19 21300980 21300980 1 + G T LUAD 21300990 + 21300970 21301010 41 AATTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA AATTCAGCAGTGCATGGTGGCTCATGCCTGTAATCCCAACA < 41bp 1 0.348901093266912 1 0.107734739780426 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300990 chr19:21300980 nonsynonymous SNV 0.006 2 11 hm5C_associated_SNPs_27169 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300980 21300980 1 + G T LUAD 21300992 + 21300972 21301012 41 TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT TTCAGCAGTGCATGGTGGCTCATGCCTGTAATCCCAACACT < 41bp 1 0.221796486442202 1 0.120239436626434 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300992 chr19:21300980 nonsynonymous SNV 0.006 2 9 hm5C_associated_SNPs_27170 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300980 21300980 1 + G T LUAD 21300996 + 21300976 21301016 41 GCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGA GCAGTGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGA < 41bp 1 0.146201312974274 1 0.0919382274150848 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300996 chr19:21300980 nonsynonymous SNV 0.006 2 5 hm5C_associated_SNPs_27171 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300980 21300980 1 + G T LUAD 21300997 + 21300977 21301017 41 CAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGAG CAGTGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGAG < 41bp 1 0.597344320411712 1 0.080018937587738 experiment 0.805311359176575 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300997 chr19:21300980 nonsynonymous SNV 0.006 2 4 hm5C_associated_SNPs_27172 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr2 27886959 27886959 1 + G A LUAD 27886967 + 27886947 27886987 41 GACTCCAATTCTGGGGAGCCCGACATCCCTCCTCCTCAGCC GACTCCAATTCTAGGGAGCCCGACATCCCTCCTCCTCAGCC < 41bp 1 0.679515535972859 1 0.241856306791306 experiment 0.640968928054282 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27886967 chr2:27886959 nonsynonymous SNV 0.004 0 13 hm5C_associated_SNPs_27173 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:27886940-27886960
64251 chr2 118579625 118579625 1 + G T LUAD 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCCGTCTGCTTGACCAT < 41bp 1 0.544031130813771 1 0.154429614543915 experiment 0.911937738372458 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579625 synonymous SNV . 0 35 hm5C_associated_SNPs_27174 0 0 12 FASTKD2 POSTAR2 ENCODE chr2:118579565-118579634
64251 chr2 118579626 118579626 1 + G T LUAD 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGTACCAT < 41bp 1 0.497212149831313 1 0.169942915439606 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579626 nonsynonymous SNV 0.992 4 36 hm5C_associated_SNPs_27175 0 0 12 FASTKD2 POSTAR2 ENCODE chr2:118579565-118579634
64251 chr5 140076603 140076603 1 + G A LUAD 140076598 + 140076578 140076618 41 AACAAGCAGGCCCTGGAGGGCCTGGGAGACCTAAAGCTGCT AACAAGCAGGCCCTGGAGGGCCTGGAAGACCTAAAGCTGCT < 41bp 1 0.173601786096942 1 0.245291084051132 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HARS2 ENSG00000112855 CDS Human protein_coding chr5:140076598 chr5:140076603 nonsynonymous SNV 0.757 0 26 hm5C_associated_SNPs_27176 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:140076593-140076631
64251 chr11 65824773 65824773 1 + C T LUAD 65824781 + 65824761 65824801 41 GCCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCC GCCCCACTCCTATAGTTTTGCCCATGGGAGCCCCTGTTCCC < 41bp 1 0.379560780909505 1 0.1583571434021 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824781 chr11:65824773 nonsynonymous SNV 0.985 0 13 hm5C_associated_SNPs_27177 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chr11 65824773 65824773 1 + C T LUAD 65824782 + 65824762 65824802 41 CCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC CCCCACTCCTATAGTTTTGCCCATGGGAGCCCCTGTTCCCC < 41bp 1 0.259980970711903 1 0.138499230146408 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824782 chr11:65824773 nonsynonymous SNV 0.985 0 12 hm5C_associated_SNPs_27178 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chr9 33917170 33917170 1 + G A LUAD 33917160 + 33917140 33917180 41 GACGACTTGTATGATGACGACATTGATGATGAAGATGAGGA GACGACTTGTATGATGACGACATTGATGATAAAGATGAGGA < 41bp 1 0.0836723144749557 1 0.0811320543289185 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917160 chr9:33917170 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_27179 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 135933328 135933328 1 + T C LUAD 135933325 + 135933305 135933345 41 GACTTCAAGCCATCCGACGGCAGTGAAAACGAAATGGAGAC GACTTCAAGCCATCCGACGGCAGCGAAAACGAAATGGAGAC < 41bp 1 0.57758914102913 1 0.705822229385376 experiment 0.844821717941741 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135933325 chr9:135933328 synonymous SNV . 0 24 hm5C_associated_SNPs_27180 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:135933321-135933376
64251 chr3 25542753 25542753 1 + C T LUAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACTAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.280208805657712 1 0.0811055600643158 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542753 synonymous SNV . 0 3 hm5C_associated_SNPs_27181 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr22 44368118 44368118 1 + G T LUAD 44368123 + 44368103 44368143 41 TTTTTTTATTTAGGTGATGACGCACTTCCAAATGGGTTAGA TTTTTTTATTTAGGTTATGACGCACTTCCAAATGGGTTAGA < 41bp 1 0.161437310038381 1 0.130294263362885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44368123 chr22:44368118 nonsynonymous SNV 0.976 1 16 hm5C_associated_SNPs_27182 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:44368117-44368118
64251 chr1 223934731 223934731 1 + G T LUAD 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATCAACGGATGCTATGAAGCGCTATCAGGGGTTGCCACCA < 41bp 1 0.778550684274527 1 0.591277658939362 experiment 0.442898631450946 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934731 nonsynonymous SNV 0.991 5 33 hm5C_associated_SNPs_27183 0 0 2 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934731 223934731 1 + G T LUAD 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TCAACGGATGCTATGAAGCGCTATCAGGGGTTGCCACCACT < 41bp 1 0.0590191511510538 1 0.050122082233429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934731 nonsynonymous SNV 0.991 5 31 hm5C_associated_SNPs_27184 0 0 2 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr7 45662261 45662261 1 + G T LUAD 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GTTTCACTGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG < 41bp 1 0.389296674614441 1 0.607295036315918 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662261 synonymous SNV . 0 8 hm5C_associated_SNPs_27186 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:45662233-45662265
64251 chr3 40499405 40499405 1 + G T LUAD 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA TGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA < 41bp 1 0.370258331320989 1 0.0497450530529022 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499405 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_27187 0 0 6 DDX3X POSTAR2 ENCODE chr3:40499383-40499408
64251 chr8 145150838 145150838 1 + C G LUAD 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCGGGGCTGGCCATGGCTGTGCATTCGGCTG < 41bp 1 0.553238883476513 1 0.458281219005585 experiment 0.893522233046974 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150838 nonsynonymous SNV 0.868 1 29 hm5C_associated_SNPs_27188 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145150832-145150868
64251 chr9 135926314 135926314 1 + G A LUAD 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC AGCCACTGGAGGCTGCAGCCCAGACGTGGAGAAGAGTCTGC < 41bp 1 0.482064337741717 1 0.321490257978439 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926303 chr9:135926314 synonymous SNV . 0 32 hm5C_associated_SNPs_27189 0 0 4 METAP2 POSTAR2 ENCODE chr9:135926247-135926316
64251 chr8 48874123 48874123 1 + G A LUAD 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCAA < 41bp 1 0.171026644982051 1 0.0730916857719421 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874123 nonsynonymous SNV 0.735 0 40 hm5C_associated_SNPs_27190 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:48874080-48874140
64251 chr1 28169792 28169792 1 + G T LUAD 28169778 + 28169758 28169798 41 GAAATCTGGACATTCAAAGACCAAAGAGGAAGAGGAAGAAC GAAATCTGGACATTCAAAGACCAAAGAGGAAGAGTAAGAAC < 41bp 1 0.433826085066363 1 0.142889887094498 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28169778 chr1:28169792 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_27191 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:28169746-28169823
64251 chr17 38450672 38450672 1 + G C LUAD 38450687 + 38450667 38450707 41 CTAGAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT CTAGACAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT < 41bp 1 0.513297253439372 1 0.271117269992828 experiment 0.973405493121256 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450687 chr17:38450672 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_27193 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38450620-38450675
64251 chr12 49666960 49666960 1 + G A LUAD 49666979 + 49666959 49666999 41 GGAGGTTGGAGCAGATAGTGCTGACGGAGAGGATGAGGGTG GAAGGTTGGAGCAGATAGTGCTGACGGAGAGGATGAGGGTG < 41bp 1 0.454378996572388 1 0.119721323251724 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666979 chr12:49666960 nonsynonymous SNV 0.999 4 2 hm5C_associated_SNPs_27194 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:49666940-49666960
64251 chr12 6646140 6646140 1 + G T LUAD 6646142 + 6646122 6646162 41 CGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCA CGCTGAGTACGTCGTGGATTCCACTGGCGTCTTCACCACCA < 41bp 1 0.499962499472605 1 0.291548937559128 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646142 chr12:6646140 nonsynonymous SNV 0.984 2 19 hm5C_associated_SNPs_27195 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6646120-6646140
64251 chr12 98941397 98941397 1 + G A LUAD 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGGCCGGCCATTAAAACTCAGTGATTTCAGGATGGAGGA < 41bp 1 0.720580266485308 1 0.265827268362045 experiment 0.558839467029384 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941397 nonsynonymous SNV 0.992 0 16 hm5C_associated_SNPs_27196 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:98941372-98941431
64251 chr19 30936293 30936293 1 + G A LUAD 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT TTTTTATCACACGGGCTGAACCAGACTCTCGAGTATAACCT < 41bp 1 0.319444919054909 1 0.0574756562709808 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936293 synonymous SNV . 0 6 hm5C_associated_SNPs_27197 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936273-30936300
64251 chr1 155029447 155029447 1 + C T LUAD 155029461 + 155029441 155029481 41 AGCATCCTGGGAGTCGCCTCCTCCATAGCCCATGAGTTGGG AGCATCTTGGGAGTCGCCTCCTCCATAGCCCATGAGTTGGG < 41bp 1 0.789239038694835 1 0.966972470283508 experiment 0.421521922610331 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155029461 chr1:155029447 synonymous SNV . 0 7 hm5C_associated_SNPs_27198 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155029431-155029469
64251 chr11 61897767 61897767 1 + G A LUAD 61897785 + 61897765 61897805 41 AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC AAACTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC < 41bp 1 0.396654894163593 1 0.200185686349869 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897785 chr11:61897767 synonymous SNV . 0 3 hm5C_associated_SNPs_27199 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61897746-61897767
64251 chr5 68425393 68425393 1 + A C LUAD 68425373 + 68425353 68425393 41 CTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACA CTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACC < 41bp 1 0.569059574846112 1 0.347192645072937 experiment 0.861880850307776 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68425373 chr5:68425393 synonymous SNV . 0 41 hm5C_associated_SNPs_27202 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:68425385-68425408
64251 chr1 40882768 40882768 1 + G T LUAD 40882766 + 40882746 40882786 41 AGCTGCAATGGAACCTTACTCAGGTAAGCTACCCCATTTTA AGCTGCAATGGAACCTTACTCATGTAAGCTACCCCATTTTA < 41bp 1 0.546870322351617 1 0.587926387786865 experiment 0.906259355296767 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40882766 chr1:40882768 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_27204 0 0 2 GPKOW POSTAR2 ENCODE chr1:40882710-40882769
64251 chr2 48738497 48738497 1 + A T LUAD 48738508 + 48738488 48738528 41 ACAACTACCAAGAGGAGTTACGAGGATCAGTTAAGTATGAT ACAACTACCTAGAGGAGTTACGAGGATCAGTTAAGTATGAT < 41bp 1 0.599166707416356 1 0.659791231155396 experiment 0.801666585167287 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48738508 chr2:48738497 stopgain 1.000 1 10 hm5C_associated_SNPs_27205 0 0 1 GRWD1 POSTAR2 ENCODE chr2:48738478-48738501
64251 chr16 70573038 70573038 1 + C A LUAD 70573018 + 70572998 70573038 41 TCTCACCAGGTTACTGAGATCCGGCTCAAATATTTTGATAC TCTCACCAGGTTACTGAGATCCGGCTCAAATATTTTGATAA < 41bp 1 0.187386641749055 1 0.67575079202652 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70573018 chr16:70573038 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_27208 0 0 36 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:70573020-70573040
64251 chr20 47711286 47711286 1 + C G LUAD 47711273 + 47711253 47711293 41 CTTTCTTCCAATCCAGGACTCCATTATTACAGTCTTTGATT CTTTCTTCCAATCCAGGACTCCATTATTACAGTGTTTGATT < 41bp 1 0.0438745858593639 1 0.0669434666633606 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47711273 chr20:47711286 nonsynonymous SNV 0.996 2 34 hm5C_associated_SNPs_27210 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:47711248-47711286
64251 chr7 128845610 128845610 1 + C A LUAD 128845621 + 128845601 128845641 41 ACCATGAGGCTTGGGGAGCCCACGTAGGTGTCTTGGGGACC ACCATGAGGATTGGGGAGCCCACGTAGGTGTCTTGGGGACC < 41bp 1 0.608089157378287 1 0.454896926879883 experiment 0.783821685243426 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMO ENSG00000128602 CDS Human protein_coding chr7:128845621 chr7:128845610 nonsynonymous SNV 0.993 1 10 hm5C_associated_SNPs_27211 0 0 1 PPIG POSTAR2 ENCODE chr7:128845571-128845622
64251 chr7 100466171 100466171 1 + C A LUAD 100466155 + 100466135 100466175 41 CCTCCTGCCTACCGCACGGGCTCCCTGAAGCCAAATCCAGC CCTCCTGCCTACCGCACGGGCTCCCTGAAGCCAAATACAGC < 41bp 1 0.178326234068981 1 0.0270720422267914 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466155 chr7:100466171 nonsynonymous SNV 0.005 0 37 hm5C_associated_SNPs_27212 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr7:100466170-100466171
64251 chr3 101311551 101311551 1 + G C LUAD 101311550 + 101311530 101311570 41 ATAACCAGAAGCTGTGGGAGCGAAATATAAAATCTCATCTT ATAACCAGAAGCTGTGGGAGCCAAATATAAAATCTCATCTT < 41bp 1 0.493653087461195 1 0.442451387643814 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNP ENSG00000081154 CDS Human protein_coding chr3:101311550 chr3:101311551 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_27213 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101311540-101311571
64251 chr2 209190010 209190010 1 + G T LUAD 209190000 + 209189980 209190020 41 GTTTTTGTTTGTAGAACAAACCAAGACACTGATGTTTTTTG GTTTTTGTTTGTAGAACAAACCAAGACACTTATGTTTTTTG < 41bp 1 0.0862567002060634 1 0.18374490737915 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190000 chr2:209190010 synonymous SNV . 0 31 hm5C_associated_SNPs_27214 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:209190000-209190020
64251 chr20 60768505 60768505 1 + G T LUAD 60768502 + 60768482 60768522 41 ACCTGCAAGGTGTTTCTCAGCAAGATTGAGGACCGTGTTTC ACCTGCAAGGTGTTTCTCAGCAATATTGAGGACCGTGTTTC < 41bp 1 0.475420189542996 1 0.0505549609661102 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG2 ENSG00000101181 CDS Human protein_coding chr20:60768502 chr20:60768505 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_27215 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:60768499-60768535
64251 chr17 27074265 27074265 1 + C T LUAD 27074259 + 27074239 27074279 41 TCTTCAAGTGCCCTGAGGACCAGCTTCCTCTGGACTATGCC TCTTCAAGTGCCCTGAGGACCAGCTTTCTCTGGACTATGCC < 41bp 1 0.486515888941734 1 0.218199610710144 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27074259 chr17:27074265 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_27216 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27074233-27074270
64251 chr16 89620293 89620293 1 + C T LUAD 89620301 + 89620281 89620321 41 GCCCATCTCCTTCCCTGAGGCGCAGGAGGGCCTCATGGGCA GCCCATCTCCTTTCCTGAGGCGCAGGAGGGCCTCATGGGCA < 41bp 1 0.658683870895436 1 0.438875168561935 experiment 0.682632258209129 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89620301 chr16:89620293 nonsynonymous SNV . 0 13 hm5C_associated_SNPs_27221 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:89620274-89620300
64251 chr19 11105607 11105607 1 + A C LUAD 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG CTGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG < 41bp 1 0.634670587015048 1 0.670882403850555 experiment 0.730658825969904 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105607 nonsynonymous SNV 0.902 4 1 hm5C_associated_SNPs_27223 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:11105597-11105618
64251 chr13 20233197 20233197 1 + G C LUAD 20233203 + 20233183 20233223 41 GGATGAAGTTGGAAGATTTCCAAAAGCACCTTGATGGGAAA GGATGAAGTTGGAACATTTCCAAAAGCACCTTGATGGGAAA < 41bp 1 0.755296149808944 1 0.82645320892334 experiment 0.489407700382112 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20233203 chr13:20233197 nonsynonymous SNV 0.760 4 15 hm5C_associated_SNPs_27224 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr13:20233197-20233229
64251 chr3 49736441 49736441 1 + G A LUAD 49736459 + 49736439 49736479 41 TTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA TTAAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA < 41bp 1 0.569239412065805 1 0.293868601322174 experiment 0.86152117586839 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736459 chr3:49736441 nonsynonymous SNV 0.989 0 3 hm5C_associated_SNPs_27225 0 0 6 DDX24 POSTAR2 ENCODE chr3:49736412-49736445
64251 chr11 71946456 71946456 1 + G A LUAD 71946459 + 71946439 71946479 41 GCTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACC GCTCCATGAAGGTGCGGATGCCCACGGAGCGCCTGGGCACC < 41bp 1 0.159401092668546 1 0.117874532938004 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946459 chr11:71946456 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_27226 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946456 71946456 1 + G A LUAD 71946460 + 71946440 71946480 41 CTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCC CTCCATGAAGGTGCGGATGCCCACGGAGCGCCTGGGCACCC < 41bp 1 0.360455786910173 1 0.0704125165939331 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946460 chr11:71946456 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_27227 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946456 71946456 1 + G A LUAD 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG ATGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG < 41bp 1 0.386139678700002 1 0.0423650145530701 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946456 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_27228 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr19 50002824 50002824 1 + A G LUAD 50002809 + 50002789 50002829 41 TCGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTG TCGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGGCAGTG < 41bp 1 0.585290974165466 1 0.412686616182327 experiment 0.829418051669068 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS11 ENSG00000142534 CDS Human protein_coding chr19:50002809 chr19:50002824 nonsynonymous SNV 0.994 2 36 hm5C_associated_SNPs_27231 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50002763-50002833
64251 chr2 99999328 99999328 1 + G A LUAD 99999336 + 99999316 99999356 41 CCCCAGACAATTGAGTCTATCAACCTTCTCAAATCTAAAAA CCCCAGACAATTAAGTCTATCAACCTTCTCAAATCTAAAAA < 41bp 1 0.335344668581663 1 0.219954371452332 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99999336 chr2:99999328 nonsynonymous SNV 0.997 3 13 hm5C_associated_SNPs_27234 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99999304-99999362
64251 chr1 193205393 193205393 1 + G T LUAD 193205390 + 193205370 193205410 41 ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGTG ACTTTTCTACTTGTAGGGACCGCTTTGTAGCCGTTTTTGTG < 41bp 1 0.314799565388555 1 0.0590779781341553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC73 ENSG00000134371 CDS Human protein_coding chr1:193205390 chr1:193205393 nonsynonymous SNV 0.843 4 24 hm5C_associated_SNPs_27235 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:193205393-193205394
64251 chr20 42695416 42695416 1 + C A LUAD 42695411 + 42695391 42695431 41 TTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAA TTCCCCAGCAGCTCGGGATCCTGCTAACCTGGCCCATCCAA < 41bp 1 0.46539557467149 1 0.371286571025848 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695411 chr20:42695416 stopgain 0.911 0 26 hm5C_associated_SNPs_27236 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr5 71495211 71495211 1 + C A LUAD 71495192 + 71495172 71495212 41 GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAACC GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAAAC < 41bp 1 0.101547422711274 1 0.148515820503235 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495192 chr5:71495211 nonsynonymous SNV 0.995 2 40 hm5C_associated_SNPs_27237 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71495089-71495441
64251 chr20 37570740 37570740 1 + G T LUAD 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCTCAATTTCTGGATATGTGCATGTATCTGAAAGTTCATCC < 41bp 1 0.269590560108597 1 0.0376361310482025 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570740 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_27239 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37570719-37570750
64251 chr1 39799732 39799732 1 + G C LUAD 39799715 + 39799695 39799735 41 ACAGTTGTGCAGTCCATTGACAGAGGTCTTTTGGAGAGAGA ACAGTTGTGCAGTCCATTGACAGAGGTCTTTTGGAGACAGA < 41bp 1 0.218556726758571 1 0.671160876750946 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MACF1 ENSG00000127603 CDS Human protein_coding chr1:39799715 chr1:39799732 nonsynonymous SNV 0.998 0 38 hm5C_associated_SNPs_27240 0 0 1 SAFB2 POSTAR2 ENCODE chr1:39799710-39799813
64251 chr17 65822348 65822348 1 + G A LUAD 65822356 + 65822336 65822376 41 ATGGAAGAGGACGACGATGACTCCGATTATCCGGAGGAGAT ATGGAAGAGGACAACGATGACTCCGATTATCCGGAGGAGAT < 41bp 1 0.48897979745351 1 0.358384251594543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822356 chr17:65822348 nonsynonymous SNV 0.994 0 13 hm5C_associated_SNPs_27241 0 0 24 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr17 65822348 65822348 1 + G A LUAD 65822358 + 65822338 65822378 41 GGAAGAGGACGACGATGACTCCGATTATCCGGAGGAGATGG GGAAGAGGACAACGATGACTCCGATTATCCGGAGGAGATGG < 41bp 1 0.165250717537835 1 0.102515816688538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822358 chr17:65822348 nonsynonymous SNV 0.994 0 11 hm5C_associated_SNPs_27242 0 0 24 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr17 65822348 65822348 1 + G A LUAD 65822366 + 65822346 65822386 41 ACGACGATGACTCCGATTATCCGGAGGAGATGGAAGACGAC ACAACGATGACTCCGATTATCCGGAGGAGATGGAAGACGAC < 41bp 1 0.705248502921366 1 0.822073340415955 experiment 0.589502994157268 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65822366 chr17:65822348 nonsynonymous SNV 0.994 0 3 hm5C_associated_SNPs_27243 0 0 24 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:65822297-65822353
64251 chr3 45565506 45565506 1 + C T LUAD 45565503 + 45565483 45565523 41 CCTTAGCAAGCCTCTCAGAGCGTCATTCTCCACAGCCCCGA CCTTAGCAAGCCTCTCAGAGCGTTATTCTCCACAGCCCCGA < 41bp 1 0.331716461800918 1 0.0400277972221375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45565503 chr3:45565506 synonymous SNV . 0 24 hm5C_associated_SNPs_27244 0 0 1 U2AF2 POSTAR2 ENCODE chr3:45565472-45565543
64251 chr2 99156082 99156082 1 + C G LUAD 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTGTCCCTGCACGTGCCCCGGCAGT < 41bp 1 0.313205987302113 1 0.406590700149536 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156082 synonymous SNV . 0 19 hm5C_associated_SNPs_27245 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr3 184045480 184045480 1 + C G LUAD 184045472 + 184045452 184045492 41 AGGCTATCATTGAGGAATATCTCCATCTCAATGACATGAAA AGGCTATCATTGAGGAATATCTCCATCTGAATGACATGAAA < 41bp 1 0.762907334318449 1 0.923636436462402 experiment 0.474185331363101 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184045472 chr3:184045480 synonymous SNV . 0 29 hm5C_associated_SNPs_27246 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184045412-184045486
64251 chr19 30936301 30936301 1 + G T LUAD 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT TTTTTGTCACACGTGCTGAACCAGACTCTCGAGTATAACCT < 41bp 1 0.283233365964197 1 0.0335721671581268 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936301 nonsynonymous SNV 0.998 3 14 hm5C_associated_SNPs_27247 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:30936288-30936311
64251 chr19 18729267 18729267 1 + C T LUAD 18729284 + 18729264 18729304 41 ACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT ACCTTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT < 41bp 1 0.226944376185457 1 0.154537200927734 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729284 chr19:18729267 synonymous SNV . 0 4 hm5C_associated_SNPs_27259 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:18729254-18729288
64251 chr5 72201204 72201204 1 + A G LUAD 72201196 + 72201176 72201216 41 GTTTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTT GTTTCTCTGACCAGTTTCCTCTTCCCTTGAAAGAGCGTCTT < 41bp 1 0.209679838875174 1 0.30716672539711 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72201196 chr5:72201204 synonymous SNV . 0 29 hm5C_associated_SNPs_27260 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:72201167-72201204
64251 chr17 41561531 41561531 1 + G T LUAD 41561537 + 41561517 41561557 41 CTGGACAATCACTTGGGGATCAACGACAAGGACCTTGGTGA CTGGACAATCACTTTGGGATCAACGACAAGGACCTTGGTGA < 41bp 1 0.524310974743461 1 0.226370811462402 experiment 0.951378050513078 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41561537 chr17:41561531 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_27261 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:41561482-41561549
64251 chr3 40503438 40503438 1 + A G LUAD 40503435 + 40503415 40503455 41 ATTGATAATTTTCAGAGGAACAGAATAATCAAGAATGAAGT ATTGATAATTTTCAGAGGAACAGGATAATCAAGAATGAAGT < 41bp 1 0.774041823437335 1 0.460309475660324 experiment 0.451916353125331 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40503435 chr3:40503438 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_27262 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:40503424-40503456
64251 chr16 57144694 57144694 1 + G T LUAD 57144680 + 57144660 57144700 41 CCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCC CCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGTCAGCCC < 41bp 1 0.613510352725948 1 0.226213991641998 experiment 0.772979294548104 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144680 chr16:57144694 nonsynonymous SNV 0.039 0 35 hm5C_associated_SNPs_27263 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144681 + 57144661 57144701 41 CACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCC CACATACCCAGTGGGGGTGCCCCAGCAGCGGGGTCAGCCCC < 41bp 1 0.261950017108285 1 0.242058128118515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144681 chr16:57144694 nonsynonymous SNV 0.039 0 34 hm5C_associated_SNPs_27264 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144682 + 57144662 57144702 41 ACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCC ACATACCCAGTGGGGGTGCCCCAGCAGCGGGGTCAGCCCCC < 41bp 1 0.395835932078419 1 0.307772666215897 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144682 chr16:57144694 nonsynonymous SNV 0.039 0 33 hm5C_associated_SNPs_27265 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144695 + 57144675 57144715 41 GGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGT GGGTGCCCCAGCAGCGGGGTCAGCCCCCATGGGCCCCCAGT < 41bp 1 0.291493255979679 1 0.120512664318085 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144695 chr16:57144694 nonsynonymous SNV 0.039 0 20 hm5C_associated_SNPs_27266 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144698 + 57144678 57144718 41 TGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATT TGCCCCAGCAGCGGGGTCAGCCCCCATGGGCCCCCAGTATT < 41bp 1 0.243877921745363 1 0.215398162603378 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144698 chr16:57144694 nonsynonymous SNV 0.039 0 17 hm5C_associated_SNPs_27267 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144699 + 57144679 57144719 41 GCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTG GCCCCAGCAGCGGGGTCAGCCCCCATGGGCCCCCAGTATTG < 41bp 1 0.720631892731441 1 0.795078098773956 experiment 0.558736214537117 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144699 chr16:57144694 nonsynonymous SNV 0.039 0 16 hm5C_associated_SNPs_27268 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144700 + 57144680 57144720 41 CCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGC CCCCAGCAGCGGGGTCAGCCCCCATGGGCCCCCAGTATTGC < 41bp 1 0.325308030303494 1 0.414365977048874 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144700 chr16:57144694 nonsynonymous SNV 0.039 0 15 hm5C_associated_SNPs_27269 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144694 57144694 1 + G T LUAD 57144701 + 57144681 57144721 41 CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCG CCCAGCAGCGGGGTCAGCCCCCATGGGCCCCCAGTATTGCG < 41bp 1 0.227536954302882 1 0.419857144355774 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144701 chr16:57144694 nonsynonymous SNV 0.039 0 14 hm5C_associated_SNPs_27270 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr7 148921513 148921513 1 + C T LUAD 148921521 + 148921501 148921541 41 AGCGGCTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTG AGCGGCTGCACATGGGCGAGCGGCCTTTCCAATGTGCACTG < 41bp 1 0.456393054736392 1 0.652655005455017 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921521 chr7:148921513 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_27271 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148921508-148921536
64251 chr17 3629172 3629172 1 + G A LUAD 3629168 + 3629148 3629188 41 AGGCATCACTGCGCTTTGAGCACCGAGACTTACACTGGGGG AGGCATCACTGCGCTTTGAGCACCAAGACTTACACTGGGGG < 41bp 1 0.599027209556053 1 0.583825469017029 experiment 0.801945580887893 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HASPIN ENSG00000177602 CDS Human protein_coding chr17:3629168 chr17:3629172 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_27272 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:3629160-3629180
64251 chr18 19209061 19209061 1 + C T LUAD 19209067 + 19209047 19209087 41 GAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGGT GAAGAGGAAGAGGATGTGGCCGTGGCAGAGGAAGAGGGGGT < 41bp 1 0.708350692544653 1 0.231335401535034 experiment 0.583298614910694 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209067 chr18:19209061 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_27273 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr6 26156697 26156697 1 + T A LUAD 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGACTGCAGGTGCGGCCAAGCGCAAAGCGTCTG < 41bp 1 0.577192868320026 1 0.115238726139069 experiment 0.845614263359948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156697 nonsynonymous SNV 0.837 0 11 hm5C_associated_SNPs_27275 0 0 45 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr1 150280578 150280578 1 + C G LUAD 150280582 + 150280562 150280602 41 AAAGCTATGAAAGGTGCCGGCGGATCTACAACATGGAAATG AAAGCTATGAAAGGTGGCGGCGGATCTACAACATGGAAATG < 41bp 1 0.423086682641558 1 0.358746081590652 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280582 chr1:150280578 nonsynonymous SNV 0.995 2 17 hm5C_associated_SNPs_27276 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:150280570-150280596
64251 chr11 108004609 108004609 1 + G A LUAD 108004618 + 108004598 108004638 41 AGCCTTTCCTTGCTGCCAGCCACTAAGCTTGGTTCCATTGC AGCCTTTCCTTACTGCCAGCCACTAAGCTTGGTTCCATTGC < 41bp 1 0.477153572682737 1 0.114433526992798 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACAT1 ENSG00000075239 CDS Human protein_coding chr11:108004618 chr11:108004609 synonymous SNV . 0 12 hm5C_associated_SNPs_27277 0 0 4 GRWD1 POSTAR2 ENCODE chr11:108004585-108004635
64251 chr19 52714679 52714679 1 + C T LUAD 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CGCACCTTGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.457373443299215 1 0.0917878746986389 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714679 nonsynonymous SNV 0.996 4 8 hm5C_associated_SNPs_27278 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr19 52714679 52714679 1 + C T LUAD 52714695 + 52714675 52714715 41 ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT ACCTTGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT < 41bp 1 0.758389908777514 1 0.863255977630615 experiment 0.483220182444972 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714695 chr19:52714679 nonsynonymous SNV 0.996 4 5 hm5C_associated_SNPs_27279 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr5 14291313 14291313 1 + G A LUAD 14291323 + 14291303 14291343 41 TCCAGCTGAGGCTGTTTGAACAGGATGCTGAGAAGGTAAAG TCCAGCTGAGACTGTTTGAACAGGATGCTGAGAAGGTAAAG < 41bp 1 0.50990279708756 1 0.436176300048828 experiment 0.980194405824879 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14291323 chr5:14291313 synonymous SNV . 0 11 hm5C_associated_SNPs_27281 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:14291265-14291321
64251 chr3 47453061 47453061 1 + C T LUAD 47453044 + 47453024 47453064 41 GCCAGCTGCGTGGAGGGGCTCTCCCCATACTGCCCCCCGCT GCCAGCTGCGTGGAGGGGCTCTCCCCATACTGCCCCCTGCT < 41bp 1 0.337667790462296 1 0.114839047193527 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47453044 chr3:47453061 nonsynonymous SNV 0.988 4 38 hm5C_associated_SNPs_27282 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:47453031-47453069
64251 chr1 978663 978663 1 + G C LUAD 978683 + 978663 978703 41 GCGACGTGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG CCGACGTGTGCTGTGAAGAACGGGCAGGCAGCGTGTGAATG < 41bp 1 0.347066666964315 1 0.167671471834183 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:978683 chr1:978663 nonsynonymous SNV 0.050 4 1 hm5C_associated_SNPs_27295 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:978637-978670
64251 chr14 53175517 53175517 1 + G C LUAD 53175498 + 53175478 53175518 41 CTAGTCATTGTTAAAGCTACCAATGGACCAAGATATGTTGT CTAGTCATTGTTAAAGCTACCAATGGACCAAGATATGTTCT < 41bp 1 0.18424390411271 1 0.66331672668457 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53175498 chr14:53175517 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_27300 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:53175498-53175541
64251 chr22 18567976 18567976 1 + C T LUAD 18567978 + 18567958 18567998 41 CTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGATCCTCTG CTGCCCTTCAAAAAGAGTTTCCTGGCTGCCTTGATCCTCTG < 41bp 1 0.187402541826571 1 0.0781746506690979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX26 ENSG00000215193 CDS Human protein_coding chr22:18567978 chr22:18567976 nonsynonymous SNV 0.964 1 19 hm5C_associated_SNPs_27301 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:18567944-18568004
64251 chr1 161173236 161173236 1 + G T LUAD 161173246 + 161173226 161173266 41 GAGGTGTTCGGCAGTGGCAGCCAGATGTGGAATGGGCACAG GAGGTGTTCGTCAGTGGCAGCCAGATGTGGAATGGGCACAG < 41bp 1 0.656486322691416 1 0.651928186416626 experiment 0.687027354617167 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161173246 chr1:161173236 synonymous SNV . 0 11 hm5C_associated_SNPs_27302 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:161173223-161173249
64251 chrX 135106602 135106602 1 + G T LUAD 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTTGTGGTGGCACCACTGCAATGCTGTCATGCTT < 41bp 1 0.281151367376171 1 0.574376046657562 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106602 nonsynonymous SNV 0.996 4 10 hm5C_associated_SNPs_27303 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:135106590-135106609
64251 chr18 33780028 33780028 1 + A T LUAD 33780019 + 33779999 33780039 41 AGGTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGG AGGTCAAGTCTGGGCGGTTGCACCCTGTGTGCACGCCTGGG < 41bp 1 0.635481689790788 1 0.0634149312973022 experiment 0.729036620418424 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780019 chr18:33780028 nonsynonymous SNV 0.000 1 30 hm5C_associated_SNPs_27307 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780028 33780028 1 + A T LUAD 33780021 + 33780001 33780041 41 GTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAA GTCAAGTCTGGGCGGTTGCACCCTGTGTGCACGCCTGGGAA < 41bp 1 0.416185814763724 1 0.0514830648899078 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780021 chr18:33780028 nonsynonymous SNV 0.000 1 28 hm5C_associated_SNPs_27308 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780028 33780028 1 + A T LUAD 33780022 + 33780002 33780042 41 TCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAG TCAAGTCTGGGCGGTTGCACCCTGTGTGCACGCCTGGGAAG < 41bp 1 0.463817965490558 1 0.317749470472336 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780022 chr18:33780028 nonsynonymous SNV 0.000 1 27 hm5C_associated_SNPs_27309 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780028 33780028 1 + A T LUAD 33780023 + 33780003 33780043 41 CAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAGT CAAGTCTGGGCGGTTGCACCCTGTGTGCACGCCTGGGAAGT < 41bp 1 0.641415547726126 1 0.220759838819504 experiment 0.717168904547747 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780023 chr18:33780028 nonsynonymous SNV 0.000 1 26 hm5C_associated_SNPs_27310 0 0 2 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr2 71297697 71297697 1 + G A LUAD 71297704 + 71297684 71297724 41 GCAGAAGCAGATGGACTGAGCACAAACCACTGGGTAAAAAC GCAGAAGCAGATGAACTGAGCACAAACCACTGGGTAAAAAC < 41bp 1 0.55248064341579 1 0.422680795192719 experiment 0.895038713168421 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAGK ENSG00000124357 CDS Human protein_coding chr2:71297704 chr2:71297697 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_27311 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:71297625-71297704
64251 chr17 38318122 38318122 1 + C T LUAD 38318128 + 38318108 38318148 41 GAAAAGCCTGACACCAAAAGCACTGTGACTGGAGAGAGGCA GAAAAGCCTGACACTAAAAGCACTGTGACTGGAGAGAGGCA < 41bp 1 0.275060115036902 1 0.153714418411255 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318128 chr17:38318122 synonymous SNV . 0 15 hm5C_associated_SNPs_27313 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003588 chr17:38318106-38318127
64251 chr20 44522627 44522627 1 + G A LUAD 44522643 + 44522623 44522663 41 ACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA ACAGACTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA < 41bp 1 0.135321969716783 1 0.930726706981659 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522643 chr20:44522627 synonymous SNV . 0 5 hm5C_associated_SNPs_27314 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr20 42169596 42169596 1 + A T LUAD 42169585 + 42169565 42169605 41 CCCCACCAGGCAAGAATAGTCAGAGTGACCCATGTATCTGG CCCCACCAGGCAAGAATAGTCAGAGTGACCCTTGTATCTGG < 41bp 1 0.741214462755781 1 0.933744788169861 experiment 0.517571074488438 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169585 chr20:42169596 nonsynonymous SNV 0.216 1 32 hm5C_associated_SNPs_27324 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:42169585-42169615
64251 chr9 131193498 131193498 1 + G A LUAD 131193480 + 131193460 131193500 41 AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCCGGG AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCCAGG < 41bp 1 0.73381219073303 1 0.802995502948761 experiment 0.53237561853394 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131193480 chr9:131193498 synonymous SNV . 0 39 hm5C_associated_SNPs_27325 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131193474-131193513
64251 chr8 145139400 145139400 1 + G T LUAD 145139396 + 145139376 145139416 41 CTCATGGTTCTGCGGCAGGCCTCCGGCCGCCCCCACGGCTC CTCATGGTTCTGCGGCAGGCCTCCTGCCGCCCCCACGGCTC < 41bp 1 0.610207418098002 1 0.747368216514587 experiment 0.779585163803997 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139396 chr8:145139400 nonsynonymous SNV 0.722 4 25 hm5C_associated_SNPs_27326 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr8 145139400 145139400 1 + G T LUAD 145139416 + 145139396 145139436 41 CTCCGGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCT CTCCTGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCT < 41bp 1 0.30490739885467 1 0.0367430448532104 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139416 chr8:145139400 nonsynonymous SNV 0.722 4 5 hm5C_associated_SNPs_27327 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr8 145139400 145139400 1 + G T LUAD 145139418 + 145139398 145139438 41 CCGGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCTAC CCTGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCTAC < 41bp 1 0.593728800448716 1 0.055500328540802 experiment 0.812542399102568 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139418 chr8:145139400 nonsynonymous SNV 0.722 4 3 hm5C_associated_SNPs_27328 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr8 124787436 124787436 1 + G C LUAD 124787439 + 124787419 124787459 41 TATGAGGAACTGCTAAAGTACAGCCGAGATCATCTCATGCT TATGAGGAACTGCTAAACTACAGCCGAGATCATCTCATGCT < 41bp 1 0.409890455837298 1 0.16869044303894 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124787439 chr8:124787436 nonsynonymous SNV 0.987 1 18 hm5C_associated_SNPs_27329 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:124787436-124787437
64251 chr16 83999018 83999018 1 + G T LUAD 83999000 + 83998980 83999020 41 GAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCGGT GAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCTGT < 41bp 1 0.592020402362534 1 0.795649528503418 experiment 0.815959195274931 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83999000 chr16:83999018 synonymous SNV . 0 39 hm5C_associated_SNPs_27330 0 0 1 RBM15 POSTAR2 ENCODE chr16:83999016-83999085
64251 chr11 43908159 43908159 1 + A G LUAD 43908156 + 43908136 43908176 41 TGTTTCCTTTGTTTCTTTAGCAGAGAGGGTGTGTATGAAAT TGTTTCCTTTGTTTCTTTAGCAGGGAGGGTGTGTATGAAAT < 41bp 1 0.694529853453876 1 0.669933140277863 experiment 0.610940293092249 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43908156 chr11:43908159 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_27333 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:43908153-43908177
64251 chr14 23794470 23794470 1 + C G LUAD 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGGGACATCATG < 41bp 1 0.309726744763818 1 0.157879114151001 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794470 nonsynonymous SNV 0.999 1 32 hm5C_associated_SNPs_27334 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr14 23794470 23794470 1 + C G LUAD 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGGGACATCATGG < 41bp 1 0.422210565428114 1 0.489984780550003 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794470 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_27335 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chrX 73046055 73046055 1 - C A LUAD 73046036 - 73046016 73046056 41 TGTGAAGAGATGCTCCAGGCCAATGAGAAGAATTAGACAAG TTTGAAGAGATGCTCCAGGCCAATGAGAAGAATTAGACAAG < 41bp 1 0.107476451891578 1 0.181662529706955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046036 chrX:73046055 . . 0 2 hm5C_associated_SNPs_27336 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046031-73046061
64251 chrX 73046055 73046055 1 - C A LUAD 73046069 - 73046049 73046089 41 GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATGTGAAGA GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATTTGAAGA < 41bp 1 0.270808023535847 1 0.880592823028564 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046069 chrX:73046055 . . 0 35 hm5C_associated_SNPs_27337 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046031-73046061
64251 chrX 73046055 73046055 1 - C A LUAD 73046075 - 73046055 73046095 41 TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATG TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATT < 41bp 1 0.222305013256787 1 0.335459113121033 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046075 chrX:73046055 . . 0 41 hm5C_associated_SNPs_27338 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046031-73046061
64251 chr8 26227802 26227802 1 + A T LUAD 26227822 + 26227802 26227842 41 ATGAAATAAGTGTTGACAGCCTAGACTTCAATAAGAAAATC TTGAAATAAGTGTTGACAGCCTAGACTTCAATAAGAAAATC < 41bp 1 0.613519852456282 1 0.184426933526993 experiment 0.772960295087436 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227822 chr8:26227802 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_27341 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26227645-26227833
64251 chr19 7620626 7620626 1 + C T LUAD 7620645 + 7620625 7620665 41 GCAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA GTAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA < 41bp 1 0.250562950458473 1 0.508771359920502 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620645 chr19:7620626 stopgain 0.998 0 2 hm5C_associated_SNPs_27342 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr19 7620626 7620626 1 + C T LUAD 7620646 + 7620626 7620666 41 CAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG TAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG < 41bp 1 0.471743793711504 1 0.728572368621826 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620646 chr19:7620626 stopgain 0.998 0 1 hm5C_associated_SNPs_27343 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr16 53319565 53319565 1 + G C LUAD 53319551 + 53319531 53319571 41 AACCAGACCACTCAGAAGTTCCTGCTGAGTGGTGGGATTTT AACCAGACCACTCAGAAGTTCCTGCTGAGTGGTGCGATTTT < 41bp 1 0.0414919344532761 1 0.0353025197982788 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53319551 chr16:53319565 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_27344 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:53319553-53319588
64251 chr3 48501867 48501867 1 + G A LUAD 48501851 + 48501831 48501871 41 GTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGG GTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGAAAGG < 41bp 1 0.377074628591299 1 0.32731556892395 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48501851 chr3:48501867 nonsynonymous SNV 0.528 4 37 hm5C_associated_SNPs_27345 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:48501839-48501874
64251 chr19 50302908 50302908 1 + G A LUAD 50302928 + 50302908 50302948 41 GGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGG AGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGG < 41bp 1 0.640239403173704 1 0.764561891555786 experiment 0.719521193652591 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302928 chr19:50302908 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_27346 0 0 3 DGCR8 POSTAR2 ENCODE chr19:50302881-50302917
64251 chr2 46574050 46574050 1 + C T LUAD 46574069 + 46574049 46574089 41 GCTGCGCGGTGCCGGCGGAGCAAGGAGACGGAGGTGTTCTA GTTGCGCGGTGCCGGCGGAGCAAGGAGACGGAGGTGTTCTA < 41bp 1 0.794181447301967 1 0.799935579299927 experiment 0.411637105396065 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46574069 chr2:46574050 nonsynonymous SNV 0.387 4 2 hm5C_associated_SNPs_27347 0 0 3 BUD13 POSTAR2 ENCODE chr2:46573983-46574092
64251 chr6 31638977 31638977 1 + G T LUAD 31638959 + 31638939 31638979 41 TTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGAC TTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAATAC < 41bp 1 0.331401856549451 1 0.0359694957733154 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638959 chr6:31638977 nonsynonymous SNV 0.986 3 39 hm5C_associated_SNPs_27348 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31638946-31638994
64251 chr6 31638977 31638977 1 + G T LUAD 31638961 + 31638941 31638981 41 CCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCC CCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAATACCC < 41bp 1 0.317463841456292 1 0.045625776052475 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638961 chr6:31638977 nonsynonymous SNV 0.986 3 37 hm5C_associated_SNPs_27349 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31638946-31638994
64251 chr20 37570728 37570728 1 + G T LUAD 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCTCAATTTCTGTATATGTGCATGGATCTGAAAGTTCATCC < 41bp 1 0.394545292868402 1 0.0706040263175964 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570728 nonsynonymous SNV 0.990 3 13 hm5C_associated_SNPs_27350 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37570719-37570750
64251 chr19 810798 810798 1 + G C LUAD 810787 + 810767 810807 41 AACCACGACCTCGGGGAGAACCACCACCTGCGGGTCTCCTT AACCACGACCTCGGGGAGAACCACCACCTGCCGGTCTCCTT < 41bp 1 0.14234477793473 1 0.204798072576523 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:810787 chr19:810798 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_27351 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:810788-810839
64251 chr2 54872392 54872392 1 + G T LUAD 54872378 + 54872358 54872398 41 GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCGGAAGAAG GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCGTAAGAAG < 41bp 1 0.396202746252205 1 0.806172132492065 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872378 chr2:54872392 synonymous SNV . 0 35 hm5C_associated_SNPs_27352 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr7 73927187 73927187 1 + G T LUAD 73927169 + 73927149 73927189 41 CCTTCCCACAGTGCTCAGCGCTGTCCAAACTGAACGCCGAG CCTTCCCACAGTGCTCAGCGCTGTCCAAACTGAACGCCTAG < 41bp 1 0.0907740890089883 1 0.401000171899796 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73927169 chr7:73927187 stopgain 0.924 1 39 hm5C_associated_SNPs_27354 0 0 3 DDX24 POSTAR2 ENCODE chr7:73927170-73927197
64251 chr6 42974779 42974779 1 + G C LUAD 42974762 + 42974742 42974782 41 TCAAATTCAAGGAGGTGAAGCGGGCAGGACTCAACGAGATG TCAAATTCAAGGAGGTGAAGCGGGCAGGACTCAACGACATG < 41bp 1 0.579163011089812 1 0.477130681276321 experiment 0.841673977820376 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974762 chr6:42974779 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_27357 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42974736-42974797
64251 chr6 42974779 42974779 1 + G C LUAD 42974771 + 42974751 42974791 41 AGGAGGTGAAGCGGGCAGGACTCAACGAGATGGTGGAGTAC AGGAGGTGAAGCGGGCAGGACTCAACGACATGGTGGAGTAC < 41bp 1 0.614294728130752 1 0.860748767852783 experiment 0.771410543738496 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974771 chr6:42974779 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_27358 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42974736-42974797
64251 chrX 103432893 103432893 1 + G C LUAD 103432885 + 103432865 103432905 41 TCTGCAAGCAGCAGTGGGTCCAGTGTTGGAAACTCTGCTTC TCTGCAAGCAGCAGTGGGTCCAGTGTTGCAAACTCTGCTTC < 41bp 1 0.796049020869885 1 0.421134352684021 experiment 0.40790195826023 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103432885 chrX:103432893 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_27367 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917667 chrX:103432882-103432901
64251 chr20 47895497 47895497 1 + C T LUAD 47895499 + 47895479 47895519 41 TGGTGTAAATGATGACTTCACTTTTTTCCCCATCAGATCGA TGGTGTAAATGATGACTTTACTTTTTTCCCCATCAGATCGA < 41bp 1 0.107032178726588 1 0.0471195578575134 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895499 chr20:47895497 . . 0 19 hm5C_associated_SNPs_27369 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47895460-47895500
64251 chr20 47895497 47895497 1 + C T LUAD 47895509 + 47895489 47895529 41 GATGACTTCACTTTTTTCCCCATCAGATCGACAATGCTGAC GATGACTTTACTTTTTTCCCCATCAGATCGACAATGCTGAC < 41bp 1 0.304282354602495 1 0.0718928575515747 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895509 chr20:47895497 . . 0 9 hm5C_associated_SNPs_27370 0 0 100 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47895460-47895500
64251 chr20 44037105 44037105 1 + G A LUAD 44037094 + 44037074 44037114 41 TACTTGTTTTGCTCCTCTACCCGCAGGAGCTGACATGGACC TACTTGTTTTGCTCCTCTACCCGCAGGAGCTAACATGGACC < 41bp 1 0.4375897162969 1 0.363094687461853 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274;ENSG00000254806 CDS Human other chr20:44037094 chr20:44037105 nonsynonymous SNV 0.963 1 32 hm5C_associated_SNPs_27371 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr20:44037096-44037115
64251 chr14 21544746 21544746 1 + C G LUAD 21544752 + 21544732 21544772 41 ATCCTCCCCTTGTTCAGCGGCTGCTGATTCTCATTCATGAT ATCCTCCCCTTGTTGAGCGGCTGCTGATTCTCATTCATGAT < 41bp 1 0.142826088579395 1 0.124041885137558 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21544752 chr14:21544746 nonsynonymous SNV 0.778 1 15 hm5C_associated_SNPs_27372 0 0 3 NOL12 POSTAR2 ENCODE chr14:21544721-21544752
64251 chr2 46574056 46574056 1 + G T LUAD 46574069 + 46574049 46574089 41 GCTGCGCGGTGCCGGCGGAGCAAGGAGACGGAGGTGTTCTA GCTGCGCTGTGCCGGCGGAGCAAGGAGACGGAGGTGTTCTA < 41bp 1 0.784640090972353 1 0.840094685554504 experiment 0.430719818055294 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46574069 chr2:46574056 nonsynonymous SNV 0.607 4 8 hm5C_associated_SNPs_27373 0 0 3 BUD13 POSTAR2 ENCODE chr2:46573983-46574092
64251 chr9 123898152 123898152 1 + G T LUAD 123898159 + 123898139 123898179 41 TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAAGCTGAG TGCAGCAGACCCATGGAGATCTCAGTGCCTATGAAGCTGAG < 41bp 1 0.603575032374987 1 0.434450149536133 experiment 0.792849935250027 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898159 chr9:123898152 nonsynonymous SNV 0.996 0 14 hm5C_associated_SNPs_27377 0 0 12 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr9 123898153 123898153 1 + G T LUAD 123898159 + 123898139 123898179 41 TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAAGCTGAG TGCAGCAGACCCAGTGAGATCTCAGTGCCTATGAAGCTGAG < 41bp 1 0.635899128387478 1 0.433518886566162 experiment 0.728201743225045 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898159 chr9:123898153 stopgain 0.998 0 15 hm5C_associated_SNPs_27379 0 0 12 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr17 21731312 21731312 1 + C A LUAD 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGAGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.163086713491634 1 0.150093644857407 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731312 nonsynonymous SNV 0.971 0 16 hm5C_associated_SNPs_27385 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr17 16285380 16285380 1 + C A LUAD 16285385 + 16285365 16285405 41 GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGACGTACTCTTTCTGACTACAACATCC < 41bp 1 0.282670124821994 1 0.153589814901352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285385 chr17:16285380 synonymous SNV . 0 16 hm5C_associated_SNPs_27386 0 0 41 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:16285300-16285380
64251 chr6 42974756 42974756 1 + G T LUAD 42974749 + 42974729 42974769 41 CCACTCAGTGACCTCAAATTCAAGGAGGTGAAGCGGGCAGG CCACTCAGTGACCTCAAATTCAAGGAGTTGAAGCGGGCAGG < 41bp 1 0.739768448000365 1 0.779473066329956 experiment 0.520463103999269 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974749 chr6:42974756 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_27387 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:42974722-42974758
64251 chr6 42974756 42974756 1 + G T LUAD 42974762 + 42974742 42974782 41 TCAAATTCAAGGAGGTGAAGCGGGCAGGACTCAACGAGATG TCAAATTCAAGGAGTTGAAGCGGGCAGGACTCAACGAGATG < 41bp 1 0.574680605975937 1 0.572171926498413 experiment 0.850638788048127 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974762 chr6:42974756 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_27388 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:42974722-42974758
64251 chr6 42974756 42974756 1 + G T LUAD 42974771 + 42974751 42974791 41 AGGAGGTGAAGCGGGCAGGACTCAACGAGATGGTGGAGTAC AGGAGTTGAAGCGGGCAGGACTCAACGAGATGGTGGAGTAC < 41bp 1 0.617967592668044 1 0.900013148784637 experiment 0.764064814663912 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974771 chr6:42974756 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_27389 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:42974722-42974758
64251 chr19 36580087 36580087 1 + G T LUAD 36580091 + 36580071 36580111 41 CTGCCGGCCCTGCCAGGGTTCGGATGGACTACACTTTGTCC CTGCCGGCCCTGCCAGTGTTCGGATGGACTACACTTTGTCC < 41bp 1 0.426678602293618 1 0.89959716796875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36580091 chr19:36580087 nonsynonymous SNV 0.305 1 17 hm5C_associated_SNPs_27390 0 0 5 BUD13 POSTAR2 ENCODE chr19:36580070-36580105
64251 chrX 55033565 55033565 1 + G C LUAD 55033545 + 55033525 55033565 41 AAGCCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATG AAGCCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATC < 41bp 1 0.287508472111828 1 0.0918411612510681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033545 chrX:55033565 nonsynonymous SNV 0.008 0 41 hm5C_associated_SNPs_27393 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:55033564-55033565
64251 chr3 183882070 183882070 1 + G T LUAD 183882074 + 183882054 183882094 41 GCTGGTGTCAGCTGAGGGCTCACACCCAGACCCAGCCCCCT GCTGGTGTCAGCTGAGTGCTCACACCCAGACCCAGCCCCCT < 41bp 1 0.319557217746359 1 0.16473326086998 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882074 chr3:183882070 nonsynonymous SNV 0.996 4 17 hm5C_associated_SNPs_27394 0 0 6 DDX24 POSTAR2 ENCODE chr3:183882052-183882107
64251 chr6 160212138 160212138 1 + C T LUAD 160212137 + 160212117 160212157 41 GGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACA GGGCTGGCGGACGGTGTTTCCTTCCCGTGAGTTCTGGCACA < 41bp 1 0.467484173376165 1 0.0920713543891907 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212137 chr6:160212138 synonymous SNV . 0 22 hm5C_associated_SNPs_27396 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:160212120-160212140
64251 chrX 53114910 53114910 1 + A T LUAD 53114930 + 53114910 53114950 41 ACAATTCATGACATCAAGATCTCTGACTTCATGGAGACCAC TCAATTCATGACATCAAGATCTCTGACTTCATGGAGACCAC < 41bp 1 0.406762122655051 1 0.244189888238907 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPYL2 ENSG00000184205 CDS Human protein_coding chrX:53114930 chrX:53114910 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_27398 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:53114894-53114921
64251 chr9 131193497 131193497 1 + C T LUAD 131193480 + 131193460 131193500 41 AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCCGGG AGCAGTGCCATCAGGAACCTCGGCGTAGACCTGCTCCTGGG < 41bp 1 0.728293125184799 1 0.726210474967957 experiment 0.543413749630401 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131193480 chr9:131193497 nonsynonymous SNV 0.994 4 38 hm5C_associated_SNPs_27400 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131193474-131193513
64251 chr2 32768471 32768471 1 + C G LUAD 32768463 + 32768443 32768483 41 ATCAAGTCAGCAGTACAGACCATGTCTCCCATACCTGCCCA ATCAAGTCAGCAGTACAGACCATGTCTCGCATACCTGCCCA < 41bp 1 0.103461146293897 1 0.0703944563865662 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32768463 chr2:32768471 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_27401 0 0 1 YBX3 POSTAR2 ENCODE chr2:32768452-32768489
64251 chr2 173451116 173451116 1 + G A LUAD 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTAGT < 41bp 1 0.342797825213908 1 0.421351075172424 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451116 synonymous SNV . 0 39 hm5C_associated_SNPs_27402 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr10 43292409 43292409 1 + G T LUAD 43292423 + 43292403 43292443 41 AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC AAAGCATCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC < 41bp 1 0.202718945151116 1 0.140712052583694 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292423 chr10:43292409 nonsynonymous SNV 0.007 0 7 hm5C_associated_SNPs_27403 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43292354-43292412
64251 chr1 109643075 109643075 1 + G T LUAD 109643068 + 109643048 109643088 41 AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG AGCTCTCCTCCTGCGAAGCCCCCTCGGTGCGCTGTGCAGCG < 41bp 1 0.128318509569673 1 0.15941309928894 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643068 chr1:109643075 . . 0 28 hm5C_associated_SNPs_27404 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643075 109643075 1 + G T LUAD 109643072 + 109643052 109643092 41 CTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGC CTCCTCCTGCGAAGCCCCCTCGGTGCGCTGTGCAGCGAGGC < 41bp 1 0.635345220329717 1 0.850648760795593 experiment 0.729309559340566 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643072 chr1:109643075 . . 0 24 hm5C_associated_SNPs_27405 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643075 109643075 1 + G T LUAD 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT CCTGCGAAGCCCCCTCGGTGCGCTGTGCAGCGAGGCCCCTT < 41bp 1 0.755123535805804 1 0.0644865334033966 experiment 0.489752928388393 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643075 . . 0 19 hm5C_associated_SNPs_27406 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643075 109643075 1 + G T LUAD 109643087 + 109643067 109643107 41 CCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGC CCCCTCGGTGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGC < 41bp 1 0.756028740331547 1 0.900782346725464 experiment 0.487942519336907 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643087 chr1:109643075 . . 0 9 hm5C_associated_SNPs_27407 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643075 109643075 1 + G T LUAD 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGTGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT < 41bp 1 0.182814339678646 1 0.0481016337871552 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643075 . . 0 3 hm5C_associated_SNPs_27408 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643075 109643075 1 + G T LUAD 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT TGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT < 41bp 1 0.666668455359099 1 0.13563072681427 experiment 0.666663089281802 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643075 . . 0 1 hm5C_associated_SNPs_27409 0 0 36 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr20 30738501 30738501 1 + C G LUAD 30738486 + 30738466 30738506 41 GCTCTCATGACCACAGCCTGCTTCCTCTTCATGTTCATGGG GCTCTCATGACCACAGCCTGCTTCCTCTTCATGTTGATGGG < 41bp 1 0.145410020377278 1 0.0314746797084808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30738486 chr20:30738501 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_27410 0 0 2 SND1 POSTAR2 ENCODE chr20:30738498-30738506
64251 chr1 117626662 117626662 1 + T C LUAD 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA TCCCACGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA < 41bp 1 0.135704361995944 1 0.123739808797836 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626662 synonymous SNV . 0 6 hm5C_associated_SNPs_27411 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117626608-117626693
64251 chr15 68570886 68570886 1 + G T LUAD 68570888 + 68570868 68570908 41 ATGTCAGCCAGCAGGGAGGGCAGCGCTCCACGCCCCTCATC ATGTCAGCCAGCAGGGAGTGCAGCGCTCCACGCCCCTCATC < 41bp 1 0.706985074866496 1 0.729649186134338 experiment 0.586029850267008 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FEM1B ENSG00000169018 CDS Human protein_coding chr15:68570888 chr15:68570886 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_27412 0 0 5 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr15:68570880-68570900
64251 chr7 16823093 16823093 1 + G A LUAD 16823094 + 16823074 16823114 41 GAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT GAACCAGAAAGACCCCCGCACGAATCCTAGTGCATTCCTTT < 41bp 1 0.197900547599755 1 0.107584118843079 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823094 chr7:16823093 nonsynonymous SNV 0.905 2 20 hm5C_associated_SNPs_27413 0 0 2 U2AF2 POSTAR2 ENCODE chr7:16823026-16823106
64251 chr17 38151727 38151727 1 + G A LUAD 38151726 + 38151706 38151746 41 CGAATCTCCTTGGCTGACATCGCCCAGAAGCTGCAGTTGGA CGAATCTCCTTGGCTGACATCACCCAGAAGCTGCAGTTGGA < 41bp 1 0.273023012116337 1 0.279764145612717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38151726 chr17:38151727 nonsynonymous SNV 0.872 3 22 hm5C_associated_SNPs_27420 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38151700-38151771
64251 chr13 111164384 111164384 1 + G A LUAD 111164391 + 111164371 111164411 41 TGCAATGGAGGCCGCGGCACCTGCCACTACTACGCCAACAA TGCAATGGAGGCCACGGCACCTGCCACTACTACGCCAACAA < 41bp 1 0.163045841547445 1 0.195716977119446 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111164391 chr13:111164384 nonsynonymous SNV 0.924 5 14 hm5C_associated_SNPs_27421 1 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:111164372-111164404
64251 chr4 123900467 123900467 1 + C G LUAD 123900482 + 123900462 123900502 41 TTACTCTGAAGGATTTCTTGCAGGCAATGAATGATATCAGA TTACTGTGAAGGATTTCTTGCAGGCAATGAATGATATCAGA < 41bp 1 0.313669850960905 1 0.393336474895477 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPATA5 ENSG00000145375 CDS Human protein_coding chr4:123900482 chr4:123900467 nonsynonymous SNV 0.999 1 6 hm5C_associated_SNPs_27426 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:123900437-123900473
64251 chr17 37358692 37358692 1 + G T LUAD 37358680 + 37358660 37358700 41 TGGCCCGCCGGAAGGGCAGGCACATGGGCATAGGTAAGTGT TGGCCCGCCGGAAGGGCAGGCACATGGGCATATGTAAGTGT < 41bp 1 0.339111302422185 1 0.27501368522644 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358680 chr17:37358692 nonsynonymous SNV 0.977 4 33 hm5C_associated_SNPs_27427 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:37358653-37358693
64251 chr17 37358692 37358692 1 + G T LUAD 37358688 + 37358668 37358708 41 CGGAAGGGCAGGCACATGGGCATAGGTAAGTGTGGTCATCT CGGAAGGGCAGGCACATGGGCATATGTAAGTGTGGTCATCT < 41bp 1 0.12920560479772 1 0.0858438313007355 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358688 chr17:37358692 nonsynonymous SNV 0.977 4 25 hm5C_associated_SNPs_27428 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:37358653-37358693
64251 chr12 58174040 58174040 1 + G T LUAD 58174050 + 58174030 58174070 41 TCTCTCAGGGGGGGATGTTACCATCACTGACCTGCCCCTGG TCTCTCAGGGTGGGATGTTACCATCACTGACCTGCCCCTGG < 41bp 1 0.306403254391071 1 0.14102166891098 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58174050 chr12:58174040 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_27429 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr12:58174040-58174060
64251 chr2 127453712 127453712 1 + T C LUAD 127453726 + 127453706 127453746 41 GTACTTTATTTGAGGGACAACAGACTTCACTTCCCTGAATG GTACTTCATTTGAGGGACAACAGACTTCACTTCCCTGAATG < 41bp 1 0.474812858777487 1 0.548600614070892 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GYPC ENSG00000136732 CDS Human protein_coding chr2:127453726 chr2:127453712 synonymous SNV . 0 7 hm5C_associated_SNPs_27430 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:127453700-127453740
64251 chr5 142264928 142264928 1 + T G LUAD 142264910 + 142264890 142264930 41 ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTT ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAAGTT < 41bp 1 0.11041127291807 1 0.383642792701721 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142264910 chr5:142264928 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_27431 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:142264918-142264939
64251 chr6 33411147 33411147 1 + G C LUAD 33411133 + 33411113 33411153 41 GAACCCTCTCTTCCACATGGCTGCTGATGGGCCAGGTCCCC GAACCCTCTCTTCCACATGGCTGCTGATGGGCCACGTCCCC < 41bp 1 0.22019540962274 1 0.0256998836994171 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411133 chr6:33411147 nonsynonymous SNV 0.790 0 35 hm5C_associated_SNPs_27432 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:33411127-33411147
64251 chr6 31598920 31598920 1 + G A LUAD 31598935 + 31598915 31598955 41 GGAGCGAGACTCCTCCAGTACCTCCCCCACCACCCTATCTG GGAGCAAGACTCCTCCAGTACCTCCCCCACCACCCTATCTG < 41bp 1 0.101623079567158 1 0.0378304421901703 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598935 chr6:31598920 nonsynonymous SNV 0.995 3 6 hm5C_associated_SNPs_27433 0 0 7 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31598900-31598920
64251 chr6 31598920 31598920 1 + G A LUAD 31598940 + 31598920 31598960 41 GAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAG AAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAG < 41bp 1 0.143098591214195 1 0.583160281181335 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598940 chr6:31598920 nonsynonymous SNV 0.995 3 1 hm5C_associated_SNPs_27434 0 0 7 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31598900-31598920
64251 chr17 16342885 16342885 1 + C G LUAD 16342874 + 16342854 16342894 41 GAAGCGATAACTGACGACGTCTAATGTCTATCTGACCGCAG GAAGCGATAACTGACGACGTCTAATGTCTATGTGACCGCAG < 41bp 1 0.238778173910938 1 0.183290958404541 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342874 chr17:16342885 . . 0 32 hm5C_associated_SNPs_27435 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16342885 16342885 1 + C G LUAD 16342881 + 16342861 16342901 41 TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTGA TAACTGACGACGTCTAATGTCTATGTGACCGCAGTCGCTGA < 41bp 1 0.287616380410548 1 0.185306340456009 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342881 chr17:16342885 . . 0 25 hm5C_associated_SNPs_27436 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr11 107917073 107917073 1 + G C LUAD 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTCAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC < 41bp 1 0.434882997173014 1 0.47705215215683 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917073 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_27437 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr12 102120165 102120165 1 + C T LUAD 102120175 + 102120155 102120195 41 GACTGCATGTCATCAAGCACCTGAACAGGTTCACAAGCATA GACTGCATGTTATCAAGCACCTGAACAGGTTCACAAGCATA < 41bp 1 0.630518280265929 1 0.132444977760315 experiment 0.738963439468141 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHPT1 ENSG00000111666 CDS Human protein_coding chr12:102120175 chr12:102120165 nonsynonymous SNV 0.985 1 11 hm5C_associated_SNPs_27438 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102120137-102120178
64251 chr17 75398186 75398186 1 + C G LUAD 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TGCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC < 41bp 1 0.363673667228737 1 0.268301725387573 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398186 nonsynonymous SNV 0.999 3 2 hm5C_associated_SNPs_27439 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:75398170-75398197
64251 chr3 183369006 183369006 1 + G A LUAD 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATGAAACAAGACGGTACCACATACTTGGGAATGAAATGAT < 41bp 1 0.120852241052267 1 0.182456225156784 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369006 nonsynonymous SNV 0.998 1 7 hm5C_associated_SNPs_27440 0 0 3 RBM15 POSTAR2 ENCODE chr3:183368993-183369064
64251 chr6 44360513 44360513 1 + C G LUAD 44360506 + 44360486 44360526 41 ATGCCAACTCAGTGGAGGACCATTGCTCCAATCATTGGAAG ATGCCAACTCAGTGGAGGACCATTGCTGCAATCATTGGAAG < 41bp 1 0.295884740150729 1 0.22822043299675 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC5L ENSG00000096401 CDS Human protein_coding chr6:44360506 chr6:44360513 nonsynonymous SNV 0.998 4 28 hm5C_associated_SNPs_27442 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:44360408-44360534
64251 chr17 47904772 47904772 1 + G C LUAD 47904766 + 47904746 47904786 41 CCATTGTTCTCCCTCAGGACCTGATTGATGAGTGGATAGCC CCATTGTTCTCCCTCAGGACCTGATTCATGAGTGGATAGCC < 41bp 1 0.204041602331219 1 0.0221716463565826 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KAT7 ENSG00000136504 CDS Human protein_coding chr17:47904766 chr17:47904772 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_27443 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47904759-47904795
64251 chr5 112164574 112164574 1 + A C LUAD 112164560 + 112164540 112164580 41 GATTAATTTGCAGGTTATTGCGAGTGTTTTGAGGAATTTGT GATTAATTTGCAGGTTATTGCGAGTGTTTTGAGGCATTTGT < 41bp 1 0.201742355229343 1 0.43724599480629 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APC ENSG00000134982;ENSG00000258864 CDS Human other chr5:112164560 chr5:112164574 nonsynonymous SNV 1.000 5 35 hm5C_associated_SNPs_27444 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112164566-112164591
64251 chr1 229783448 229783448 1 + C T LUAD 229783428 + 229783408 229783448 41 TCCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTC TCCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTT < 41bp 1 0.248715182570428 1 0.158735692501068 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control URB2 ENSG00000135763 CDS Human protein_coding chr1:229783428 chr1:229783448 synonymous SNV . 0 41 hm5C_associated_SNPs_27445 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229783444-229783466
64251 chr14 21963405 21963405 1 + G A LUAD 21963397 + 21963377 21963417 41 TCTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAA TCTTCTCACAGGTTGAGTCTCCTTCTCAAATGGATGTTGAA < 41bp 1 0.0210149110494532 1 0.0469260513782501 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963397 chr14:21963405 synonymous SNV . 0 29 hm5C_associated_SNPs_27446 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr14 21963405 21963405 1 + G A LUAD 21963398 + 21963378 21963418 41 CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAT CTTCTCACAGGTTGAGTCTCCTTCTCAAATGGATGTTGAAT < 41bp 1 0.0811123161295936 1 0.0265757739543915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963398 chr14:21963405 synonymous SNV . 0 28 hm5C_associated_SNPs_27447 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr17 40716076 40716076 1 + C T LUAD 40716079 + 40716059 40716099 41 TCCTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG TCCTTGACTTTTGATGTTATCCCCCTGCTGGACCCCTATGG < 41bp 1 0.293325678627816 1 0.133931934833527 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40716079 chr17:40716076 synonymous SNV . 0 18 hm5C_associated_SNPs_27448 0 0 13 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr17:40716055-40716085
64251 chr2 198571382 198571382 1 + C G LUAD 198571398 + 198571378 198571418 41 CCTTCTGAGACCTACCCAGCCTTCTGCACTACCTGCTTCCC CCTTGTGAGACCTACCCAGCCTTCTGCACTACCTGCTTCCC < 41bp 1 0.27074469153182 1 0.0204371213912964 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571398 chr2:198571382 nonsynonymous SNV 0.884 2 5 hm5C_associated_SNPs_27449 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:198571363-198571414
64251 chr11 66411316 66411316 1 + G A LUAD 66411334 + 66411314 66411354 41 TCGATCCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT TCAATCCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT < 41bp 1 0.133687221232918 1 0.0544614791870117 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411334 chr11:66411316 nonsynonymous SNV 0.998 0 3 hm5C_associated_SNPs_27451 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr11:66411277-66411316
64251 chr9 130420698 130420698 1 + G C LUAD 130420683 + 130420663 130420703 41 ATATCAATAAGCGCAGAGAGCCGCTCCCCAGCCTGGAGGCT ATATCAATAAGCGCAGAGAGCCGCTCCCCAGCCTGCAGGCT < 41bp 1 0.12267622259876 1 0.0853905379772186 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130420683 chr9:130420698 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_27452 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:130420654-130420756
64251 chr4 1742645 1742645 1 + G T LUAD 1742652 + 1742632 1742672 41 TCTGAACTCCATGGAGAAGTCCTTCTCCGACCTCTTCAAGC TCTGAACTCCATGTAGAAGTCCTTCTCCGACCTCTTCAAGC < 41bp 1 0.018445272321328 1 0.0165710747241974 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1742652 chr4:1742645 stopgain 0.997 1 14 hm5C_associated_SNPs_27453 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:1742583-1742665
64251 chr6 42976164 42976164 1 + T A LUAD 42976172 + 42976152 42976192 41 TCCTCATCCGTGTCCTACTTCCCCTTCACAAGGTCAAGTCC TCCTCATCCGTGACCTACTTCCCCTTCACAAGGTCAAGTCC < 41bp 1 0.196696549341606 1 0.0876607000827789 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42976172 chr6:42976164 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_27454 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr6:42976157-42976175
64251 chr12 132334399 132334399 1 + C T LUAD 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCCGCGTCCCGTCTCCGACTTC < 41bp 1 0.308455225536262 1 0.0506669878959656 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334399 synonymous SNV . 0 26 hm5C_associated_SNPs_27455 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr22 38201991 38201991 1 + A G LUAD 38202011 + 38201991 38202031 41 AGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCC GGAAGAAGCTGGCTGCCACGCCCAAGAAAGCCAAAAAACCC < 41bp 1 0.553995113012729 1 0.426363468170166 experiment 0.892009773974542 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient H1F0 ENSG00000189060 CDS Human protein_coding chr22:38202011 chr22:38201991 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_27456 0 0 5 UPF1 POSTAR2 GSE47976,GSM1163975 chr22:38201991-38201992
64251 chr1 44071216 44071216 1 + G T LUAD 44071222 + 44071202 44071242 41 GGTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGG GGTTCTACATTGTTTTGGTGCCCATTGACCGTGTGGGCGGG < 41bp 1 0.0868171702045869 1 0.06928950548172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071222 chr1:44071216 nonsynonymous SNV 0.988 2 15 hm5C_associated_SNPs_27457 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:44071197-44071220
64251 chr1 44071216 44071216 1 + G T LUAD 44071223 + 44071203 44071243 41 GTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGGA GTTCTACATTGTTTTGGTGCCCATTGACCGTGTGGGCGGGA < 41bp 1 0.0400763863200327 1 0.127997398376465 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071223 chr1:44071216 nonsynonymous SNV 0.988 2 14 hm5C_associated_SNPs_27458 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:44071197-44071220
64251 chr2 183616853 183616853 1 + C T LUAD 183616850 + 183616830 183616870 41 AGTTACGAAGAGCATCAAATCTTCTTTATGGTCAGCTTAAG AGTTACGAAGAGCATCAAATCTTTTTTATGGTCAGCTTAAG < 41bp 1 0.206702642113612 1 0.134610295295715 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183616850 chr2:183616853 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_27459 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:183616841-183616860
64251 chr21 42629148 42629148 1 + C T LUAD 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCTCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG < 41bp 1 0.559559048874507 1 0.138466894626617 experiment 0.880881902250985 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629148 nonsynonymous SNV 0.860 0 6 hm5C_associated_SNPs_27460 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr19 50099261 50099261 1 + G T LUAD 50099242 + 50099222 50099262 41 CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCGG CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCTG < 41bp 1 0.641681375756715 1 0.712197303771973 experiment 0.71663724848657 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099242 chr19:50099261 nonsynonymous SNV 0.835 1 40 hm5C_associated_SNPs_27461 0 0 3 BUD13 POSTAR2 ENCODE chr19:50099216-50099280
64251 chr16 712767 712767 1 + A T LUAD 712768 + 712748 712788 41 GGACATGGGCGTCGTGGGCACCACGGCGGGCACGCTGTGGT GGACATGGGCGTCGTGGGCTCCACGGCGGGCACGCTGTGGT < 41bp 1 0.257585352226693 1 0.508145868778229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:712768 chr16:712767 nonsynonymous SNV 0.081 1 20 hm5C_associated_SNPs_27462 0 0 4 BUD13 POSTAR2 ENCODE chr16:712767-712851
64251 chr7 135333220 135333220 1 + A G LUAD 135333200 + 135333180 135333220 41 GAGAATCACTACAAAAGAAACTTCTGGACATTGAAGGATTA GAGAATCACTACAAAAGAAACTTCTGGACATTGAAGGATTG < 41bp 1 0.0667212223918171 1 0.184102326631546 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135333200 chr7:135333220 synonymous SNV . 0 41 hm5C_associated_SNPs_27463 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:135333165-135333259
64251 chr3 107524268 107524268 1 + G T LUAD 107524266 + 107524246 107524286 41 ATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATT ATGGACAGCCAAAAGAAATGCCTCAGGCTCCTGTACTTATT < 41bp 1 0.218807876941333 1 0.0968212485313416 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BBX ENSG00000114439 CDS Human protein_coding chr3:107524266 chr3:107524268 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_27465 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:107524256-107524278
64251 chr20 18142502 18142502 1 + G C LUAD 18142508 + 18142488 18142528 41 CCATCATTACTGTTGAGGGACTTAGAAAACGAGCAAGTCGG CCATCATTACTGTTCAGGGACTTAGAAAACGAGCAAGTCGG < 41bp 1 0.107420275569344 1 0.0245347321033478 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KAT14 ENSG00000149474 CDS Human protein_coding chr20:18142508 chr20:18142502 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_27474 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:18142497-18142547
64251 chr11 64787927 64787927 1 + A G LUAD 64787908 + 64787888 64787928 41 CAGCGCCTGGCCGGAGCAACCCTCCTCATCTTTGCTAATAA CAGCGCCTGGCCGGAGCAACCCTCCTCATCTTTGCTAATGA < 41bp 1 0.0414157637444607 1 0.097655713558197 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARL2 ENSG00000213465 CDS Human protein_coding chr11:64787908 chr11:64787927 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_27475 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:64787916-64787936
64251 chr7 150817200 150817200 1 + A G LUAD 150817203 + 150817183 150817223 41 CCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAAC CCCCCACACCCATCCGAGAGCAGTCCAAGCGGCGCTCCAAC < 41bp 1 0.0975039777302168 1 0.804827928543091 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150817203 chr7:150817200 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_27477 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:150817185-150817206
64251 chr11 46693827 46693827 1 + C G LUAD 46693815 + 46693795 46693835 41 TCCGGTACAGGACTCATTACCAGAGAAGCTGGCTGTGCATG TCCGGTACAGGACTCATTACCAGAGAAGCTGGGTGTGCATG < 41bp 1 0.627294834784137 1 0.947098314762115 experiment 0.745410330431726 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG13 ENSG00000175224 CDS Human protein_coding chr11:46693815 chr11:46693827 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_27478 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:46693805-46693829
64251 chr7 79828668 79828668 1 + G T LUAD 79828675 + 79828655 79828695 41 TTCAACAGATCCCGAGAGTACCAGCTTAATGATTCTGCAGC TTCAACAGATCCCTAGAGTACCAGCTTAATGATTCTGCAGC < 41bp 1 0.219709031843121 1 0.0550460815429688 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79828675 chr7:79828668 nonsynonymous SNV 1.000 5 14 hm5C_associated_SNPs_27479 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:79828649-79828668
64251 chr7 79828668 79828668 1 + G T LUAD 79828676 + 79828656 79828696 41 TCAACAGATCCCGAGAGTACCAGCTTAATGATTCTGCAGCA TCAACAGATCCCTAGAGTACCAGCTTAATGATTCTGCAGCA < 41bp 1 0.589597299568 1 0.349731385707855 experiment 0.820805400864001 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79828676 chr7:79828668 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_27480 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:79828649-79828668
64251 chrX 103411570 103411570 1 + G C LUAD 103411562 + 103411542 103411582 41 CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG CCTCCTCGCGGGGTGGGCACCTGCCCGACCGAGGAGCCGGG < 41bp 1 0.783410061634734 1 0.273033142089844 experiment 0.433179876730531 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411562 chrX:103411570 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_27481 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103411536-103411574
64251 chr8 77619809 77619809 1 + G T LUAD 77619825 + 77619805 77619845 41 TCCGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC TCCGTCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC < 41bp 1 0.181466984919398 1 0.510817289352417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77619825 chr8:77619809 synonymous SNV . 0 5 hm5C_associated_SNPs_27482 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:77619801-77619830
64251 chr1 231700291 231700291 1 + G A LUAD 231700298 + 231700278 231700318 41 CCTCTGATGCACAGGATAAGCAGTTTGGTACTTGGAGACTG CCTCTGATGCACAAGATAAGCAGTTTGGTACTTGGAGACTG < 41bp 1 0.449026665809192 1 0.0966461300849915 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSNAX ENSG00000116918 CDS Human protein_coding chr1:231700298 chr1:231700291 synonymous SNV . 0 14 hm5C_associated_SNPs_27484 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:231700280-231700300
64251 chr17 46128597 46128597 1 + C T LUAD 46128578 + 46128558 46128598 41 GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCC GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTTC < 41bp 1 0.204375373540405 1 0.0204247534275055 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128578 chr17:46128597 synonymous SNV . 0 40 hm5C_associated_SNPs_27485 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr17 46128597 46128597 1 + C T LUAD 46128592 + 46128572 46128612 41 ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG ACCTGACCTCACAGCTTCCCCCACTTCGGGAGATCATCCTG < 41bp 1 0.188131994414565 1 0.0903696417808533 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128592 chr17:46128597 synonymous SNV . 0 26 hm5C_associated_SNPs_27486 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr1 161761933 161761933 1 + G T LUAD 161761929 + 161761909 161761949 41 TCCAGAAAATGGACTGACTCCAAAGAAAAAAATTCAGGTGA TCCAGAAAATGGACTGACTCCAAATAAAAAAATTCAGGTGA < 41bp 1 0.24769004749794 1 0.749476850032806 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161761929 chr1:161761933 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_27489 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161761913-161761933
64251 chr16 67917910 67917910 1 + G T LUAD 67917892 + 67917872 67917912 41 GCCGTGATGCACCTGGACCACAGTGACCCCATCACTCGGGA GCCGTGATGCACCTGGACCACAGTGACCCCATCACTCGTGA < 41bp 1 0.566229277183758 1 0.30531769990921 experiment 0.867541445632484 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917892 chr16:67917910 synonymous SNV . 0 39 hm5C_associated_SNPs_27490 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67917869-67917927
64251 chr12 6647021 6647021 1 + C T LUAD 6647018 + 6646998 6647038 41 CAAGAAGGTGGTGAAGCAGGCGTCGGAGGGCCCCCTCAAGG CAAGAAGGTGGTGAAGCAGGCGTTGGAGGGCCCCCTCAAGG < 41bp 1 0.279796330623387 1 0.514114856719971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647018 chr12:6647021 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_27491 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6646940-6647024
64251 chr1 231401781 231401781 1 + A C LUAD 231401783 + 231401763 231401803 41 TTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTT TTCTGAATATTGTGATGGCGCCATTTTTTAAAAGAGAAGTT < 41bp 1 0.0697179821722929 1 0.0602617561817169 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401783 chr1:231401781 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_27492 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231401767-231401796
64251 chr17 48433491 48433491 1 + C A LUAD 48433472 + 48433452 48433492 41 TTCCACACGGTGCTGGAGAACAGCCTGGCCTGTGAGACCCT TTCCACACGGTGCTGGAGAACAGCCTGGCCTGTGAGACCAT < 41bp 1 0.422875953455978 1 0.328668534755707 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433472 chr17:48433491 nonsynonymous SNV 0.991 1 40 hm5C_associated_SNPs_27494 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:48433469-48433496
64251 chr16 601521 601521 1 + G T LUAD 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GTCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC < 41bp 1 0.0286059199197363 1 0.0536355376243591 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601521 synonymous SNV . 0 2 hm5C_associated_SNPs_27495 0 0 1 PPIG POSTAR2 ENCODE chr16:601514-601525
64251 chrX 73045857 73045857 1 - C A LUAD 73045845 - 73045825 73045865 41 GACAGCCTGAACTCCCTGCTCATAGTAGTGGCCAAATAATT GACAGCCTTAACTCCCTGCTCATAGTAGTGGCCAAATAATT < 41bp 1 0.086211978439634 1 0.163065105676651 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045845 chrX:73045857 . . 0 9 hm5C_associated_SNPs_27496 0 0 56 U2AF2 POSTAR2 GSE83923,CSM2221659 chrX:73043140-73045860
64251 chrX 73045857 73045857 1 - C A LUAD 73045854 - 73045834 73045874 41 TCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGC TCCCAAGGGGACAGCCTTAACTCCCTGCTCATAGTAGTGGC < 41bp 1 0.409240248144538 1 0.785936117172241 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045854 chrX:73045857 . . 0 18 hm5C_associated_SNPs_27497 0 0 56 U2AF2 POSTAR2 GSE83923,CSM2221659 chrX:73043140-73045860
64251 chrX 73045857 73045857 1 - C A LUAD 73045859 - 73045839 73045879 41 CGAGGTCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTA CGAGGTCCCAAGGGGACAGCCTTAACTCCCTGCTCATAGTA < 41bp 1 0.159867889280433 1 0.451558530330658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045859 chrX:73045857 . . 0 23 hm5C_associated_SNPs_27498 0 0 56 U2AF2 POSTAR2 GSE83923,CSM2221659 chrX:73043140-73045860
64251 chrX 73045857 73045857 1 - C A LUAD 73045871 - 73045851 73045891 41 CCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC CCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTTAACTCC < 41bp 1 0.70801002079503 1 0.895379543304443 experiment 0.583979958409941 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045871 chrX:73045857 . . 0 35 hm5C_associated_SNPs_27499 0 0 56 U2AF2 POSTAR2 GSE83923,CSM2221659 chrX:73043140-73045860
64251 chrX 73045857 73045857 1 - C A LUAD 73045873 - 73045853 73045893 41 TGCCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT TGCCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTTAACT < 41bp 1 0.200416849131871 1 0.391277462244034 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045873 chrX:73045857 . . 0 37 hm5C_associated_SNPs_27500 0 0 56 U2AF2 POSTAR2 GSE83923,CSM2221659 chrX:73043140-73045860
64251 chrX 123191729 123191729 1 + A G LUAD 123191735 + 123191715 123191755 41 GGCTCTTCAGTCGTAGAGATCCAGAGGAGGATGGAATGATG GGCTCTTCAGTCGTGGAGATCCAGAGGAGGATGGAATGATG < 41bp 1 0.521068215636276 1 0.659357190132141 experiment 0.957863568727448 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123191735 chrX:123191729 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_27502 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:123191720-123191740
64251 chr14 102452915 102452915 1 + G T LUAD 102452896 + 102452876 102452916 41 AACCAGCTTTACCCGTTTGCCATCTCACTGATCGAGAGCGT AACCAGCTTTACCCGTTTGCCATCTCACTGATCGAGAGCTT < 41bp 1 0.0627200652385863 1 0.132441937923431 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102452896 chr14:102452915 nonsynonymous SNV 0.860 4 40 hm5C_associated_SNPs_27503 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr14:102452890-102452934
64251 chr2 207174855 207174855 1 + T C LUAD 207174847 + 207174827 207174867 41 TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGG TTTGATGATGACTGTGAGACCAAAAAAGCTTCTTCGAAGGG < 41bp 1 0.484400579019617 1 0.161745309829712 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174847 chr2:207174855 nonsynonymous SNV 0.003 0 29 hm5C_associated_SNPs_27504 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174770-207174869
64251 chr1 151006393 151006393 1 + A T LUAD 151006407 + 151006387 151006427 41 TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC TCTCGATAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC < 41bp 1 0.121541582123775 1 0.0612677931785583 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006407 chr1:151006393 stopgain 0.998 1 7 hm5C_associated_SNPs_27505 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151006384-151006410
64251 chr9 91963091 91963091 1 + G A LUAD 91963073 + 91963053 91963093 41 AGCTTTTACCAGTGATGACACACAAGATGGAGAGAGTGGTG AGCTTTTACCAGTGATGACACACAAGATGGAGAGAGTGATG < 41bp 1 0.783567600204004 1 0.166704148054123 experiment 0.432864799591992 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91963073 chr9:91963091 nonsynonymous SNV 0.088 0 39 hm5C_associated_SNPs_27506 0 0 8 BUD13 POSTAR2 ENCODE chr9:91963075-91963140
64251 chr1 114450790 114450790 1 + A C LUAD 114450803 + 114450783 114450823 41 CGAAAACACCCACAACATAACATAAAGATTGGTGAGTTGTT CGAAAACCCCCACAACATAACATAAAGATTGGTGAGTTGTT < 41bp 1 0.277128125689077 1 0.0822244584560394 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114450803 chr1:114450790 nonsynonymous SNV 0.902 3 8 hm5C_associated_SNPs_27507 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:114450784-114450809
64251 chr8 97332499 97332499 1 + G T LUAD 97332495 + 97332475 97332515 41 GTCATTGGTTTCCTGGAGGCCATTGTTTGCATAAAATTTGG GTCATTGGTTTCCTGGAGGCCATTTTTTGCATAAAATTTGG < 41bp 1 0.0462849480791435 1 0.0763313174247742 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97332495 chr8:97332499 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_27509 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:97332477-97332505
64251 chr2 46611659 46611659 1 + C T LUAD 46611654 + 46611634 46611674 41 AACCCTTCTTTCAGGCATGGCAAGCCGGCTGCTCGGGCCCT AACCCTTCTTTCAGGCATGGCAAGCTGGCTGCTCGGGCCCT < 41bp 1 0.250416137252471 1 0.317498385906219 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46611654 chr2:46611659 nonsynonymous SNV 0.971 3 26 hm5C_associated_SNPs_27510 0 0 2 BUD13 POSTAR2 ENCODE chr2:46611639-46611659
64251 chr17 66352911 66352911 1 + G A LUAD 66352925 + 66352905 66352945 41 AAGTATGCTGAGAAAGCAACCCAGTTCATCCAGCGTGCAAG AAGTATACTGAGAAAGCAACCCAGTTCATCCAGCGTGCAAG < 41bp 1 0.29432054729319 1 0.124501168727875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARSG ENSG00000141337 CDS Human protein_coding chr17:66352925 chr17:66352911 nonsynonymous SNV 0.138 1 7 hm5C_associated_SNPs_27512 0 0 1 GRWD1 POSTAR2 ENCODE chr17:66352810-66352973
64251 chr11 126143255 126143255 1 + C T LUAD 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAGTCGATGCTTCTCCCCTGGACCTCCGGTTCA < 41bp 1 0.532746129029717 1 0.132081568241119 experiment 0.934507741940566 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143255 nonsynonymous SNV 0.042 0 20 hm5C_associated_SNPs_27513 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr11:126143244-126143268
64251 chr10 112335124 112335124 1 + G T LUAD 112335144 + 112335124 112335164 41 GTCATCTTCGTCCAGAACAGCGGTTGGCTTTATTGCATGTG TTCATCTTCGTCCAGAACAGCGGTTGGCTTTATTGCATGTG < 41bp 1 0.202714663793782 1 0.110780656337738 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112335144 chr10:112335124 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_27516 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:112335103-112335126
64251 chr19 11114068 11114068 1 + G T LUAD 11114055 + 11114035 11114075 41 TCTGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGT TCTGATAGTGAAGAAAGTGGCTCAGAAGAAGAGTAAGAGGT < 41bp 1 0.238625755620532 1 0.212884306907654 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114055 chr19:11114068 stopgain 1.000 1 34 hm5C_associated_SNPs_27517 0 0 8 FMR1 POSTAR2 ENCODE chr19:11114046-11114074
64251 chr19 11114068 11114068 1 + G T LUAD 11114057 + 11114037 11114077 41 TGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGTAA TGATAGTGAAGAAAGTGGCTCAGAAGAAGAGTAAGAGGTAA < 41bp 1 0.361307605522724 1 0.455998301506042 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114057 chr19:11114068 stopgain 1.000 1 32 hm5C_associated_SNPs_27518 0 0 8 FMR1 POSTAR2 ENCODE chr19:11114046-11114074
64251 chr1 249212000 249212000 1 + A T LUAD 249212016 + 249211996 249212036 41 AGTGAGGAGATCATCGTGTGCCGCTGGCACGATAGCAGCGT AGTGTGGAGATCATCGTGTGCCGCTGGCACGATAGCAGCGT < 41bp 1 0.383806565698644 1 0.116716414690018 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212016 chr1:249212000 nonsynonymous SNV 0.985 2 5 hm5C_associated_SNPs_27525 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:249211981-249212008
64251 chr19 50912800 50912800 1 + G A LUAD 50912807 + 50912787 50912827 41 AGCTGGCCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTG AGCTGGCCAAGGAAACAGACCCCCTCCGGCGCCAGGTCCTG < 41bp 1 0.138538534259625 1 0.0105753839015961 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912807 chr19:50912800 synonymous SNV . 0 14 hm5C_associated_SNPs_27526 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:50912799-50912800
64251 chr19 50912800 50912800 1 + G A LUAD 50912813 + 50912793 50912833 41 CCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTGGATGGA CCAAGGAAACAGACCCCCTCCGGCGCCAGGTCCTGGATGGA < 41bp 1 0.449308751268877 1 0.721050083637238 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912813 chr19:50912800 synonymous SNV . 0 8 hm5C_associated_SNPs_27527 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:50912799-50912800
64251 chr10 75557788 75557788 1 + G T LUAD 75557805 + 75557785 75557825 41 CTGGCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTA CTGTCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTA < 41bp 1 0.107737415280073 1 0.186539143323898 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557805 chr10:75557788 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_27528 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75557767-75557792
64251 chr7 66773927 66773927 1 + G C LUAD 66773926 + 66773906 66773946 41 ATACATCCTTTTGTAGGACTCGGGGGACTATCCTCTGACAG ATACATCCTTTTGTAGGACTCCGGGGACTATCCTCTGACAG < 41bp 1 0.680213185514792 1 0.905108094215393 experiment 0.639573628970416 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control STAG3L4 ENSG00000106610 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:66773926 chr7:66773927 . . 0 22 hm5C_associated_SNPs_27533 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:66773922-66773966
64251 chr1 162745481 162745481 1 + C A LUAD 162745469 + 162745449 162745489 41 TTTCTTAAGGAGATAAAGATCATGTCTCGGCTCAAGGACCC TTTCTTAAGGAGATAAAGATCATGTCTCGGCTAAAGGACCC < 41bp 1 0.251606257576567 1 0.111975371837616 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DDR2 ENSG00000162733 CDS Human protein_coding chr1:162745469 chr1:162745481 synonymous SNV . 0 33 hm5C_associated_SNPs_27534 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:162745478-162745515
64251 chr19 55817713 55817713 1 + C T LUAD 55817715 + 55817695 55817735 41 GTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTC GTCTTCCAAAAGCCCGTCTGCTTCCAGGTGGACATCAGCTC < 41bp 1 0.116275690604295 1 0.133496940135956 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817715 chr19:55817713 nonsynonymous SNV 0.992 3 19 hm5C_associated_SNPs_27535 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr19 55817713 55817713 1 + C T LUAD 55817719 + 55817699 55817739 41 TCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCT TCCAAAAGCCCGTCTGCTTCCAGGTGGACATCAGCTCCTCT < 41bp 1 0.749006506378655 1 0.95224130153656 experiment 0.501986987242689 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817719 chr19:55817713 nonsynonymous SNV 0.992 3 15 hm5C_associated_SNPs_27536 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr19 36227603 36227603 1 + G T LUAD 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG CGATCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG < 41bp 1 0.00779612260214917 1 0.13691446185112 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227603 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_27537 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36227590-36227626
64251 chr19 47763903 47763903 1 + G T LUAD 47763890 + 47763870 47763910 41 GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGG GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCATCAAGGGG < 41bp 1 0.204971691634992 1 0.229881227016449 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763890 chr19:47763903 nonsynonymous SNV 0.994 1 34 hm5C_associated_SNPs_27538 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763903 47763903 1 + G T LUAD 47763891 + 47763871 47763911 41 GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGG GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCATCAAGGGGG < 41bp 1 0.704324869177112 1 0.391156882047653 experiment 0.591350261645776 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763891 chr19:47763903 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_27539 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763903 47763903 1 + G T LUAD 47763892 + 47763872 47763912 41 TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG TCTCCTGGGACCCCTCGGCCCCCAGGGGCCATCAAGGGGGG < 41bp 1 0.384829310478233 1 0.385050773620605 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763892 chr19:47763903 nonsynonymous SNV 0.994 1 32 hm5C_associated_SNPs_27540 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763903 47763903 1 + G T LUAD 47763893 + 47763873 47763913 41 CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC CTCCTGGGACCCCTCGGCCCCCAGGGGCCATCAAGGGGGGC < 41bp 1 0.513461809141665 1 0.698006331920624 experiment 0.97307638171667 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763893 chr19:47763903 nonsynonymous SNV 0.994 1 31 hm5C_associated_SNPs_27541 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr19 47763903 47763903 1 + G T LUAD 47763913 + 47763893 47763933 41 CCAGGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGG CCAGGGGCCATCAAGGGGGGCCGGACTCCTCCACAGCAGGG < 41bp 1 0.471739050377071 1 0.42859473824501 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763913 chr19:47763903 nonsynonymous SNV 0.994 1 11 hm5C_associated_SNPs_27542 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr11 86663317 86663317 1 - C A LUAD 86663313 - 86663293 86663333 41 CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTGCCCT CCACATGTGCATGGAATGGCCAGGTGATGAAGAGGTGCCCT < 41bp 1 0.784614717983758 1 0.851775705814362 experiment 0.430770564032484 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663313 chr11:86663317 nonsynonymous SNV 0.994 4 17 hm5C_associated_SNPs_27543 0 0 4 LIN28B POSTAR2 ENCODE chr11:86663252-86663331
64251 chr1 150280583 150280583 1 + G T LUAD 150280582 + 150280562 150280602 41 AAAGCTATGAAAGGTGCCGGCGGATCTACAACATGGAAATG AAAGCTATGAAAGGTGCCGGCTGATCTACAACATGGAAATG < 41bp 1 0.367746289769873 1 0.138836532831192 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280582 chr1:150280583 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_27544 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:150280570-150280596
64251 chr7 44801092 44801092 1 + G T LUAD 44801091 + 44801071 44801111 41 CGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAGCC CGGCTGACCTTCCCTGTGCGCTATGGGGTGGTCCTGGAGCC < 41bp 1 0.30323089433131 1 0.384092807769775 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801091 chr7:44801092 nonsynonymous SNV 0.960 4 22 hm5C_associated_SNPs_27545 0 0 6 DDX24 POSTAR2 ENCODE chr7:44801047-44801117
64251 chr6 26156692 26156692 1 + G C LUAD 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCCCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG < 41bp 1 0.534835585986398 1 0.144889771938324 experiment 0.930328828027204 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156692 nonsynonymous SNV 0.995 1 6 hm5C_associated_SNPs_27547 0 0 39 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr1 222833533 222833533 1 + A T LUAD 222833549 + 222833529 222833569 41 CCAGAATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG CCAGTATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG < 41bp 1 0.084746260768132 1 0.0762242674827576 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222833549 chr1:222833533 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_27566 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr1:222833532-222833567
64251 chr2 182786887 182786887 1 + A G LUAD 182786886 + 182786866 182786906 41 AGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAG AGTGGGCAAATCCAAAACCCCGTTAGTGGCAAGGAAGAAAG < 41bp 1 0.372019337171559 1 0.0997596383094788 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786886 chr2:182786887 synonymous SNV . 0 22 hm5C_associated_SNPs_27567 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:182786857-182786895
64251 chrX 1720178 1720178 1 + C T LUAD 1720158 + 1720138 1720178 41 ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGGAGAC ACCGGGAGCCCAGCAAGGGCCGGGGCCGGGCCACCGGAGAT < 41bp 1 0.775207769040356 1 0.865478575229645 experiment 0.449584461919287 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AKAP17A ENSG00000197976 CDS Human protein_coding chrX:1720158 chrX:1720178 synonymous SNV . 0 41 hm5C_associated_SNPs_27568 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:1720176-1720195
64251 chrX 135593856 135593856 1 + C A LUAD 135593870 + 135593850 135593890 41 AATATGCAGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAG AATATGAAGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAG < 41bp 1 0.397989752275379 1 0.185291230678558 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593870 chrX:135593856 nonsynonymous SNV 0.045 1 7 hm5C_associated_SNPs_27581 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr6 35423809 35423809 1 + G T LUAD 35423791 + 35423771 35423811 41 AGTCTATGTAGGGGGCTGGGCCTGGGGGGCAGGAGGTTGAA AGTCTATGTAGGGGGCTGGGCCTGGGGGGCAGGAGGTTTAA < 41bp 1 0.320182530228514 1 0.393773257732391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423791 chr6:35423809 nonsynonymous SNV 0.869 2 39 hm5C_associated_SNPs_27583 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423809 35423809 1 + G T LUAD 35423792 + 35423772 35423812 41 GTCTATGTAGGGGGCTGGGCCTGGGGGGCAGGAGGTTGAAA GTCTATGTAGGGGGCTGGGCCTGGGGGGCAGGAGGTTTAAA < 41bp 1 0.78312826042358 1 0.73499059677124 experiment 0.433743479152841 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423792 chr6:35423809 nonsynonymous SNV 0.869 2 38 hm5C_associated_SNPs_27584 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423809 35423809 1 + G T LUAD 35423816 + 35423796 35423836 41 GGGGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAA GGGGCAGGAGGTTTAAATCCCCCCAGGCTCCAGACCCTGAA < 41bp 1 0.582071762163411 1 0.243427604436874 experiment 0.835856475673179 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423816 chr6:35423809 nonsynonymous SNV 0.869 2 14 hm5C_associated_SNPs_27585 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423809 35423809 1 + G T LUAD 35423818 + 35423798 35423838 41 GGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGA GGCAGGAGGTTTAAATCCCCCCAGGCTCCAGACCCTGAAGA < 41bp 1 0.415262952912898 1 0.809956669807434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423818 chr6:35423809 nonsynonymous SNV 0.869 2 12 hm5C_associated_SNPs_27586 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423809 35423809 1 + G T LUAD 35423819 + 35423799 35423839 41 GCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGAA GCAGGAGGTTTAAATCCCCCCAGGCTCCAGACCCTGAAGAA < 41bp 1 0.498250309012613 1 0.697048783302307 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423819 chr6:35423809 nonsynonymous SNV 0.869 2 11 hm5C_associated_SNPs_27587 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr5 139892992 139892992 1 + G T LUAD 139893005 + 139892985 139893025 41 TTGTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG TTGTGAATGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG < 41bp 1 0.160107811174976 1 0.44102668762207 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139893005 chr5:139892992 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_27588 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:139892980-139893002
64251 chr22 39125579 39125579 1 + G T LUAD 39125568 + 39125548 39125588 41 ACGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGT ACGAAACGAGACGAGGGGGGCCCGTCTGGTGTGCCAGCAGT < 41bp 1 0.147314324841759 1 0.174940228462219 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125568 chr22:39125579 nonsynonymous SNV 0.093 0 32 hm5C_associated_SNPs_27589 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:39125579-39125580
64251 chr22 39125579 39125579 1 + G T LUAD 39125569 + 39125549 39125589 41 CGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA CGAAACGAGACGAGGGGGGCCCGTCTGGTGTGCCAGCAGTA < 41bp 1 0.0340595695009849 1 0.317718088626862 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125569 chr22:39125579 nonsynonymous SNV 0.093 0 31 hm5C_associated_SNPs_27590 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:39125579-39125580
64251 chr22 39125579 39125579 1 + G T LUAD 39125570 + 39125550 39125590 41 GAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAG GAAACGAGACGAGGGGGGCCCGTCTGGTGTGCCAGCAGTAG < 41bp 1 0.148049134521817 1 0.265359729528427 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125570 chr22:39125579 nonsynonymous SNV 0.093 0 30 hm5C_associated_SNPs_27591 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:39125579-39125580
64251 chr7 98528436 98528436 1 + A G LUAD 98528424 + 98528404 98528444 41 AGACATTCCTGAAAGCACTTCTCTTTGTCATGATGGACTTA AGACATTCCTGAAAGCACTTCTCTTTGTCATGGTGGACTTA < 41bp 1 0.0509407775892549 1 0.0771685540676117 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528424 chr7:98528436 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_27592 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr7 98528436 98528436 1 + A G LUAD 98528441 + 98528421 98528461 41 CTTCTCTTTGTCATGATGGACTTAACTGGAGAGGTAGGTGA CTTCTCTTTGTCATGGTGGACTTAACTGGAGAGGTAGGTGA < 41bp 1 0.116977729188214 1 0.110246509313583 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528441 chr7:98528436 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_27593 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chrX 129149565 129149565 1 + T A LUAD 129149555 + 129149535 129149575 41 GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG GACTGGGACCCTGGCACTGTCTGTTCAGCCAAGCGGTGGGG < 41bp 1 0.217843525167687 1 0.0930314958095551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149555 chrX:129149565 synonymous SNV . 0 31 hm5C_associated_SNPs_27595 0 0 1 FMR1 POSTAR2 ENCODE chrX:129149562-129149626
64251 chrX 73046552 73046552 1 - C G LUAD 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA CGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA < 41bp 1 0.263305542097294 1 0.351792871952057 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046552 . . 0 1 hm5C_associated_SNPs_27596 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046552 73046552 1 - C G LUAD 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CCGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG < 41bp 1 0.269405033648033 1 0.232523173093796 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046552 . . 0 2 hm5C_associated_SNPs_27597 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046552 73046552 1 - C G LUAD 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCCGAATCTGGAGGCCCATGACCCAGAACCCAGGAA < 41bp 1 0.0527130717358377 1 0.102169454097748 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046552 . . 0 8 hm5C_associated_SNPs_27598 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046552 73046552 1 - C G LUAD 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCCGAAT < 41bp 1 0.706226806452539 1 0.777833342552185 experiment 0.587546387094923 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046552 . . 0 37 hm5C_associated_SNPs_27599 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chr7 55259439 55259439 1 + T G LUAD 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCGTGGTGCACCGCGA < 41bp 1 0.0849398682395569 1 0.273907214403152 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259439 nonsynonymous SNV 0.998 2 28 hm5C_associated_SNPs_27600 1 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr22 46681155 46681155 1 + G C LUAD 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCCCTGAC < 41bp 1 0.123035471625612 1 0.360322624444962 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681155 synonymous SNV . 0 36 hm5C_associated_SNPs_27601 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr16 30975431 30975431 1 + G T LUAD 30975417 + 30975397 30975437 41 CCTGCTCTGTCGCTCTAGGCCGAATCCCGCCGCCGCTCTTC CCTGCTCTGTCGCTCTAGGCCGAATCCCGCCGCCTCTCTTC < 41bp 1 0.230003107606393 1 0.258467882871628 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30975417 chr16:30975431 nonsynonymous SNV 0.995 3 35 hm5C_associated_SNPs_27602 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30975418-30975447
64251 chrX 107821200 107821200 1 + G T LUAD 107821198 + 107821178 107821218 41 TTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGG TTAGGGCCCTCCTGGTCCACCATGACTTCCAGGACCTAAGG < 41bp 1 0.201758804682339 1 0.0787173211574554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821198 chrX:107821200 stopgain 1.000 1 23 hm5C_associated_SNPs_27608 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chrX 107821200 107821200 1 + G T LUAD 107821203 + 107821183 107821223 41 GCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATT GCCCTCCTGGTCCACCATGACTTCCAGGACCTAAGGTAATT < 41bp 1 0.0492151931827726 1 0.0621078014373779 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821203 chrX:107821200 stopgain 1.000 1 18 hm5C_associated_SNPs_27609 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chr11 43908168 43908168 1 + G T LUAD 43908156 + 43908136 43908176 41 TGTTTCCTTTGTTTCTTTAGCAGAGAGGGTGTGTATGAAAT TGTTTCCTTTGTTTCTTTAGCAGAGAGGGTGTTTATGAAAT < 41bp 1 0.467760412387878 1 0.452737003564835 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43908156 chr11:43908168 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_27610 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:43908153-43908177
64251 chr7 91714919 91714919 1 + A G LUAD 91714906 + 91714886 91714926 41 CCATTCTATTCAGCAGGTTTCAGAACCTTGGCTAGAAGAGA CCATTCTATTCAGCAGGTTTCAGAACCTTGGCTGGAAGAGA < 41bp 1 0.347071633968542 1 0.757543206214905 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714906 chr7:91714919 synonymous SNV . 0 34 hm5C_associated_SNPs_27611 0 0 2 UCHL5 POSTAR2 ENCODE chr7:91714917-91714936
64251 chr7 91714919 91714919 1 + A G LUAD 91714912 + 91714892 91714932 41 TATTCAGCAGGTTTCAGAACCTTGGCTAGAAGAGAGAAAAG TATTCAGCAGGTTTCAGAACCTTGGCTGGAAGAGAGAAAAG < 41bp 1 0.172972685047759 1 0.0967861711978912 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714912 chr7:91714919 synonymous SNV . 0 28 hm5C_associated_SNPs_27612 0 0 2 UCHL5 POSTAR2 ENCODE chr7:91714917-91714936
64251 chr7 91714919 91714919 1 + A G LUAD 91714917 + 91714897 91714937 41 AGCAGGTTTCAGAACCTTGGCTAGAAGAGAGAAAAGCTTAC AGCAGGTTTCAGAACCTTGGCTGGAAGAGAGAAAAGCTTAC < 41bp 1 0.49981155868339 1 0.342662781476974 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714917 chr7:91714919 synonymous SNV . 0 23 hm5C_associated_SNPs_27613 0 0 2 UCHL5 POSTAR2 ENCODE chr7:91714917-91714936
64251 chr22 44332968 44332968 1 + C T LUAD 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC CATCTTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.608829055137804 1 0.114076793193817 experiment 0.782341889724391 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332968 synonymous SNV . 0 5 hm5C_associated_SNPs_27614 0 0 4 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr11 67018137 67018137 1 + A G LUAD 67018125 + 67018105 67018145 41 CAGTGCAGAGGAGGGGGGTGCAGCCAGGCTGAATGGCCGGG CAGTGCAGAGGAGGGGGGTGCAGCCAGGCTGAGTGGCCGGG < 41bp 1 0.399175692926367 1 0.298158049583435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018125 chr11:67018137 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_27615 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:67018125-67018175
64251 chr7 128491313 128491313 1 + C A LUAD 128491320 + 128491300 128491340 41 TTCTATGTGGATGCCATCAACAGCCGCCATGTCAGTGCCTA TTCTATGTGGATGACATCAACAGCCGCCATGTCAGTGCCTA < 41bp 1 0.328270222479229 1 0.74024498462677 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128491320 chr7:128491313 nonsynonymous SNV 0.995 3 14 hm5C_associated_SNPs_27616 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128491290-128491322
64251 chr14 102502947 102502947 1 + G T LUAD 102502965 + 102502945 102502985 41 GTGCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGT GTTCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGT < 41bp 1 0.0429143885530687 1 0.0332762897014618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502965 chr14:102502947 nonsynonymous SNV 0.674 1 3 hm5C_associated_SNPs_27618 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr14 102502947 102502947 1 + G T LUAD 102502967 + 102502947 102502987 41 GCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGTGT TCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGTGT < 41bp 1 0.0095698430143396 1 0.0272918939590454 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502967 chr14:102502947 nonsynonymous SNV 0.674 1 1 hm5C_associated_SNPs_27619 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:102502947-102502973
64251 chr1 65895708 65895708 1 + G T LUAD 65895720 + 65895700 65895740 41 GATTTCCTGTTATTCTTGCTCGTGTGGCTGTGGTAAGTTTT GATTTCCTTTTATTCTTGCTCGTGTGGCTGTGGTAAGTTTT < 41bp 1 0.171009075035402 1 0.138167768716812 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LEPROT ENSG00000213625 CDS Human protein_coding chr1:65895720 chr1:65895708 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_27620 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:65895664-65895708
64251 chr11 67804059 67804059 1 + G A LUAD 67804064 + 67804044 67804084 41 ACTACTTGTATCGGTGACGCCCCACCGGCCCGCAGCCCCTG ACTACTTGTATCGGTAACGCCCCACCGGCCCGCAGCCCCTG < 41bp 1 0.14427198955362 1 0.139933615922928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFS8 ENSG00000110717 CDS Human protein_coding chr11:67804064 chr11:67804059 synonymous SNV . 0 16 hm5C_associated_SNPs_27623 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67804019-67804090
64251 chr3 47447462 47447462 1 + C A LUAD 47447468 + 47447448 47447488 41 CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC CCTTCGCCTACCTAAGGGAGCACTTCCCTCAAGCCTACAGC < 41bp 1 0.0669482168103135 1 0.037454754114151 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447468 chr3:47447462 synonymous SNV . 0 15 hm5C_associated_SNPs_27625 0 0 1 FMR1 POSTAR2 ENCODE chr3:47447434-47447483
64251 chr11 73941322 73941322 1 + G A LUAD 73941327 + 73941307 73941347 41 TTGAAGCCATGTATGGGGACCTTCCTCCTCCAATTATGCTG TTGAAGCCATGTATGAGGACCTTCCTCCTCCAATTATGCTG < 41bp 1 0.0634675221203389 1 0.0399886071681976 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PPME1 ENSG00000214517 CDS Human protein_coding chr11:73941327 chr11:73941322 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_27627 0 0 5 DDX24 POSTAR2 ENCODE chr11:73941309-73941410
64251 chr12 6979504 6979504 1 + C A LUAD 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGTGGTGCTTACCTCAAGCCCGAATTCGTGGACAT < 41bp 1 0.608681205807432 1 0.735070586204529 experiment 0.782637588385136 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979504 nonsynonymous SNV 0.977 4 17 hm5C_associated_SNPs_27628 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr12 6979503 6979503 1 + T A LUAD 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGTGGTGCTACCCTCAAGCCCGAATTCGTGG < 41bp 1 0.106803588438447 1 0.0291833579540253 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979503 nonsynonymous SNV 0.973 3 20 hm5C_associated_SNPs_27629 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr12 6979503 6979503 1 + T A LUAD 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGTGGTGCTACCCTCAAGCCCGAATTCGTGGACAT < 41bp 1 0.599895741896045 1 0.52504962682724 experiment 0.80020851620791 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979503 nonsynonymous SNV 0.973 3 16 hm5C_associated_SNPs_27630 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr6 158492670 158492670 1 + G A LUAD 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG AGCCATCGACACAGTGAAGACGGGCATGGGAGGCAAGGCGG < 41bp 1 0.743306994834526 1 0.715831160545349 experiment 0.513386010330948 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492670 synonymous SNV . 0 31 hm5C_associated_SNPs_27631 0 0 4 BUD13 POSTAR2 ENCODE chr6:158492660-158492788
64251 chr7 23239964 23239964 1 + G T LUAD 23239949 + 23239929 23239969 41 AGGTATCTCTACTTCTGCTCCAGCTTTTGGATTTGGGAAGC AGGTATCTCTACTTCTGCTCCAGCTTTTGGATTTGTGAAGC < 41bp 1 0.579741867748958 1 0.162512540817261 experiment 0.840516264502083 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23239949 chr7:23239964 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_27632 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23239945-23239981
64251 chr20 2097421 2097421 1 + A T LUAD 2097414 + 2097394 2097434 41 GTATGTCCTGTCCCGGAGGCCAGACCCAGCCACCAACAAAA GTATGTCCTGTCCCGGAGGCCAGACCCTGCCACCAACAAAA < 41bp 1 0.105840954070332 1 0.378416508436203 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STK35 ENSG00000125834 CDS Human protein_coding chr20:2097414 chr20:2097421 synonymous SNV . 0 28 hm5C_associated_SNPs_27633 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:2097400-2097435
64251 chr2 217012886 217012886 1 + C G LUAD 217012900 + 217012880 217012920 41 TCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT TCCTCCGGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT < 41bp 1 0.64767232305036 1 0.304502189159393 experiment 0.704655353899279 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012900 chr2:217012886 synonymous SNV . 0 7 hm5C_associated_SNPs_27636 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:217012820-217012900
64251 chr20 31021635 31021635 1 + G C LUAD 31021621 + 31021601 31021641 41 TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCCTCAGTC < 41bp 1 0.16925067274997 1 0.237145930528641 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021621 chr20:31021635 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_27637 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:31021611-31021648
64251 chr7 27827104 27827104 1 + T A LUAD 27827088 + 27827068 27827108 41 CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAATTTAGAT CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAATTAAGAT < 41bp 1 0.134637739315804 1 0.284632503986359 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27827088 chr7:27827104 stopgain 1.000 0 37 hm5C_associated_SNPs_27639 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr7:27827085-27827106
64251 chr3 50091820 50091820 1 + C A LUAD 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCAAAGAG < 41bp 1 0.0535850327176958 1 0.020379364490509 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091820 nonsynonymous SNV 0.960 3 36 hm5C_associated_SNPs_27657 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50091795-50091825
64251 chr1 11080565 11080565 1 + G C LUAD 11080572 + 11080552 11080592 41 GAGGATGAGCTGCGGGAGTTCTTCTCTCAGTACGGGGATGT GAGGATGAGCTGCCGGAGTTCTTCTCTCAGTACGGGGATGT < 41bp 1 0.483989896190718 1 0.048504650592804 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TARDBP ENSG00000120948 CDS Human protein_coding chr1:11080572 chr1:11080565 nonsynonymous SNV 0.967 4 14 hm5C_associated_SNPs_27658 0 0 36 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11080483-11080617
64251 chr16 29818879 29818879 1 + C T LUAD 29818891 + 29818871 29818911 41 CGGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGA CGGCGCTGTCGCAGTGGCCGCCGGTGGCGTGGTGACCACGA < 41bp 1 0.568985969869691 1 0.876541137695312 experiment 0.862028060260617 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818891 chr16:29818879 nonsynonymous SNV 0.980 1 9 hm5C_associated_SNPs_27659 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29818875-29818902
64251 chr16 29818879 29818879 1 + C T LUAD 29818892 + 29818872 29818912 41 GGCGCTGCCGCAGTGGCCGCCGGTGGCGTGGTGACCACGAC GGCGCTGTCGCAGTGGCCGCCGGTGGCGTGGTGACCACGAC < 41bp 1 0.644805179931687 1 0.924100041389465 experiment 0.710389640136627 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818892 chr16:29818879 nonsynonymous SNV 0.980 1 8 hm5C_associated_SNPs_27660 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29818875-29818902
64251 chr6 7581116 7581116 1 + G C LUAD 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAACAGCT < 41bp 1 0.229325532863557 1 0.15895864367485 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581116 nonsynonymous SNV 0.984 0 37 hm5C_associated_SNPs_27661 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581116 7581116 1 + G C LUAD 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTCCAGAACTCTCTGAAACAGCTGCAGCTGCAG < 41bp 1 0.749300779972434 1 0.465162664651871 experiment 0.501398440055132 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581116 nonsynonymous SNV 0.984 0 27 hm5C_associated_SNPs_27662 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581116 7581116 1 + G C LUAD 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TCCAGAACTCTCTGAAACAGCTGCAGCTGCAGAAGCAGAAG < 41bp 1 0.72749982109565 1 0.320914506912231 experiment 0.5450003578087 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581116 nonsynonymous SNV 0.984 0 18 hm5C_associated_SNPs_27663 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581116 7581116 1 + G C LUAD 7581125 + 7581105 7581145 41 ACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAGGTGGAA ACTCTCTGAAACAGCTGCAGCTGCAGAAGCAGAAGGTGGAA < 41bp 1 0.678607441625283 1 0.573496460914612 experiment 0.642785116749434 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581125 chr6:7581116 nonsynonymous SNV 0.984 0 12 hm5C_associated_SNPs_27664 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr17 43226847 43226847 1 + C T LUAD 43226860 + 43226840 43226880 41 GACGACTCGTCCGCTGGCGGCGACTTCCCGCCGCCGGCAGA GACGACTTGTCCGCTGGCGGCGACTTCCCGCCGCCGGCAGA < 41bp 1 0.492923579337861 1 0.119609475135803 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226860 chr17:43226847 nonsynonymous SNV 0.197 0 8 hm5C_associated_SNPs_27665 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:43226835-43226861
64251 chr11 43411234 43411234 1 + A C LUAD 43411217 + 43411197 43411237 41 AACAGAAACAATTAGTTGCTCAAAAAATTCACATAGAAGAG AACAGAAACAATTAGTTGCTCAAAAAATTCACATAGACGAG < 41bp 1 0.432703979899932 1 0.327079117298126 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43411217 chr11:43411234 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_27666 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:43411205-43411238
64251 chrX 107911647 107911647 1 + G T LUAD 107911644 + 107911624 107911664 41 TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCT TTCACGGTTTCCCTGGTGTGCAGTGTCCCCCAGGCCCTCCT < 41bp 1 0.489647903110366 1 0.283250570297241 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107911644 chrX:107911647 nonsynonymous SNV 0.979 3 24 hm5C_associated_SNPs_27667 0 0 3 RPS3 POSTAR2 ENCODE chrX:107911625-107911683
64251 chr2 32673994 32673994 1 + C T LUAD 32673982 + 32673962 32674002 41 GTCAGATGAAATTGATTTATCAGATGTCCTTTCAGGTAGTG GTCAGATGAAATTGATTTATCAGATGTCCTTTTAGGTAGTG < 41bp 1 0.140215535225281 1 0.430282771587372 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673982 chr2:32673994 nonsynonymous SNV 0.999 1 33 hm5C_associated_SNPs_27668 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673994 32673994 1 + C T LUAD 32673989 + 32673969 32674009 41 GAAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTT GAAATTGATTTATCAGATGTCCTTTTAGGTAGTGATTTCTT < 41bp 1 0.00714926758746728 1 0.0261027812957764 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673989 chr2:32673994 nonsynonymous SNV 0.999 1 26 hm5C_associated_SNPs_27669 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673994 32673994 1 + C T LUAD 32673990 + 32673970 32674010 41 AAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTT AAATTGATTTATCAGATGTCCTTTTAGGTAGTGATTTCTTT < 41bp 1 0.00960285201826464 1 0.0573183596134186 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673990 chr2:32673994 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_27670 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr22 41573107 41573107 1 + G T LUAD 41573112 + 41573092 41573132 41 GCCAAGCACTGCCAGGAGAACAAATGCCCGGTGCCGTTCTG GCCAAGCACTGCCAGTAGAACAAATGCCCGGTGCCGTTCTG < 41bp 1 0.188682769267798 1 0.383049011230469 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP300 ENSG00000100393 CDS Human protein_coding chr22:41573112 chr22:41573107 stopgain 1.000 1 16 hm5C_associated_SNPs_27671 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:41573100-41573120
64251 chr6 7572172 7572172 1 + G C LUAD 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAGAGAAAATGACAAGCAAGAAACATGCATGCTGATG < 41bp 1 0.489505918564434 1 0.788382768630981 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572172 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_27672 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:7572160-7572180
64251 chr6 7572172 7572172 1 + G C LUAD 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACAAGCAAGAAACATGCATGCTGATGGAGCTGCAGAAGATT < 41bp 1 0.205022038282134 1 0.0895650088787079 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572172 nonsynonymous SNV 0.998 2 17 hm5C_associated_SNPs_27673 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:7572160-7572180
64251 chr11 61913164 61913164 1 + G T LUAD 61913150 + 61913130 61913170 41 GGCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGTGG GGCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGTAGGTGG < 41bp 1 0.114226550610864 1 0.360382199287415 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913150 chr11:61913164 stopgain 1.000 1 35 hm5C_associated_SNPs_27676 0 0 3 SRSF1 POSTAR2 ENCODE chr11:61913149-61913225
64251 chr11 61913164 61913164 1 + G T LUAD 61913151 + 61913131 61913171 41 GCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGGAGGTGGA GCCAAGAAAAAGGCGGCGGCCAAGAAGATGGAGTAGGTGGA < 41bp 1 0.646824655119984 1 0.737313508987427 experiment 0.706350689760032 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913151 chr11:61913164 stopgain 1.000 1 34 hm5C_associated_SNPs_27677 0 0 3 SRSF1 POSTAR2 ENCODE chr11:61913149-61913225
64251 chr11 61913164 61913164 1 + G T LUAD 61913174 + 61913154 61913194 41 GAAGATGGAGGAGGTGGAAGCACGCAGGAAGCAGGAAGAGG GAAGATGGAGTAGGTGGAAGCACGCAGGAAGCAGGAAGAGG < 41bp 1 0.428264749710506 1 0.337863504886627 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913174 chr11:61913164 stopgain 1.000 1 11 hm5C_associated_SNPs_27678 0 0 3 SRSF1 POSTAR2 ENCODE chr11:61913149-61913225
64251 chr11 65268419 65268419 1 + C T LUAD 65268439 + 65268419 65268459 41 CTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATA TTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATA < 41bp 1 0.255701368659718 1 0.0839554369449615 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268439 chr11:65268419 . . 0 1 hm5C_associated_SNPs_27679 0 0 148 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65268300-65268420
64251 chr21 45736374 45736374 1 + G C LUAD 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACGTGCAGCGCGGAGGGACGCCCTCTGCCTTCGACCGGA < 41bp 1 0.354318662828446 1 0.146379262208939 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736374 synonymous SNV . 0 13 hm5C_associated_SNPs_27680 0 0 8 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736374 45736374 1 + G C LUAD 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACGTGCAGCGCGGAGGGACGCCCTCTGCCTTCGACCGGATC < 41bp 1 0.0771801189366266 1 0.0587510764598846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736374 synonymous SNV . 0 11 hm5C_associated_SNPs_27681 0 0 8 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736374 45736374 1 + G C LUAD 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CGTGCAGCGCGGAGGGACGCCCTCTGCCTTCGACCGGATCC < 41bp 1 0.0765143409933381 1 0.0605251789093018 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736374 synonymous SNV . 0 10 hm5C_associated_SNPs_27682 0 0 8 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr21 45736374 45736374 1 + G C LUAD 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT GTGCAGCGCGGAGGGACGCCCTCTGCCTTCGACCGGATCCT < 41bp 1 0.320117829164893 1 0.222296088933945 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736374 synonymous SNV . 0 9 hm5C_associated_SNPs_27683 0 0 8 DDX24 POSTAR2 ENCODE chr21:45736370-45736405
64251 chr9 135926292 135926292 1 + A T LUAD 135926282 + 135926262 135926302 41 AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC AGGATGAGGAGGTGCCCAAGCAGCCACTGGTGGCTGCAGCC < 41bp 1 0.612445735345813 1 0.533173561096191 experiment 0.775108529308374 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926282 chr9:135926292 nonsynonymous SNV 0.976 4 31 hm5C_associated_SNPs_27685 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:135926291-135926292
64251 chr9 135926292 135926292 1 + A T LUAD 135926295 + 135926275 135926315 41 GCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGA GCCCAAGCAGCCACTGGTGGCTGCAGCCCAGACGTGGAGGA < 41bp 1 0.792744772605436 1 0.351790130138397 experiment 0.414510454789128 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926295 chr9:135926292 nonsynonymous SNV 0.976 4 18 hm5C_associated_SNPs_27686 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:135926291-135926292
64251 chr9 135926292 135926292 1 + A T LUAD 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC AGCCACTGGTGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC < 41bp 1 0.531110287539358 1 0.438384503126144 experiment 0.937779424921284 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926303 chr9:135926292 nonsynonymous SNV 0.976 4 10 hm5C_associated_SNPs_27687 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:135926291-135926292
64251 chr15 50789393 50789393 1 + G A LUAD 50789404 + 50789384 50789424 41 AGAAATCTGGAAGTTACCACCTGTGCTTTTAGTGCATCTGA AGAAATCTGAAAGTTACCACCTGTGCTTTTAGTGCATCTGA < 41bp 1 0.261190313023723 1 0.255454897880554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50789404 chr15:50789393 stopgain 1.000 1 10 hm5C_associated_SNPs_27688 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:50789378-50789414
64251 chr11 62656092 62656092 1 + C T LUAD 62656090 + 62656070 62656110 41 CAGCCAGGCCGTGAGGAGGGCTCCCCTCTTGAGCTGGAACG CAGCCAGGCCGTGAGGAGGGCTTCCCTCTTGAGCTGGAACG < 41bp 1 0.120097946652895 1 0.159861981868744 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62656090 chr11:62656092 nonsynonymous SNV 0.005 3 23 hm5C_associated_SNPs_27689 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:62656013-62656160
64251 chr2 27302068 27302068 1 + G T LUAD 27302048 + 27302028 27302068 41 ACACAGGTTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAG ACACAGGTTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAT < 41bp 1 0.510712813010793 1 0.196035712957382 experiment 0.978574373978415 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302048 chr2:27302068 nonsynonymous SNV 0.726 1 41 hm5C_associated_SNPs_27690 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302068 27302068 1 + G T LUAD 27302063 + 27302043 27302083 41 GGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC GGGCCCTCAGCCCCGGGGGGCCCCATGCCCAGATTGCCCCC < 41bp 1 0.336669633340947 1 0.110284298658371 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302063 chr2:27302068 nonsynonymous SNV 0.726 1 26 hm5C_associated_SNPs_27691 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302068 27302068 1 + G T LUAD 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGCCCTCAGCCCCGGGGGGCCCCATGCCCAGATTGCCCCCC < 41bp 1 0.176169061949017 1 0.288736760616302 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302068 nonsynonymous SNV 0.726 1 25 hm5C_associated_SNPs_27692 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302068 27302068 1 + G T LUAD 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GCCCTCAGCCCCGGGGGGCCCCATGCCCAGATTGCCCCCCG < 41bp 1 0.267939704860095 1 0.238403469324112 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302068 nonsynonymous SNV 0.726 1 24 hm5C_associated_SNPs_27693 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302068 27302068 1 + G T LUAD 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG CCCTCAGCCCCGGGGGGCCCCATGCCCAGATTGCCCCCCGG < 41bp 1 0.284343338803246 1 0.210852652788162 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302068 nonsynonymous SNV 0.726 1 23 hm5C_associated_SNPs_27694 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 232576100 232576100 1 + G A LUAD 232576110 + 232576090 232576130 41 GGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTG GGCAGAAAATAGAAGAGACGCCCCTGCTAACGGGAATGCTG < 41bp 1 0.210974045064229 1 0.0224751532077789 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576110 chr2:232576100 stopgain 1.000 2 11 hm5C_associated_SNPs_27695 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr12 132325149 132325149 1 + G A LUAD 132325139 + 132325119 132325159 41 GTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACAC GTCCGGACGTTCCCACGGGACTCACCACTGAGGCACGACAC < 41bp 1 0.207794552943767 1 0.123150080442429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325139 chr12:132325149 nonsynonymous SNV 0.148 1 31 hm5C_associated_SNPs_27698 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:132325073-132325162
64251 chr2 27302069 27302069 1 + G T LUAD 27302063 + 27302043 27302083 41 GGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC GGGCCCTCAGCCCCGGGGGGCCCCAGTCCCAGATTGCCCCC < 41bp 1 0.404744580450582 1 0.103249430656433 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302063 chr2:27302069 nonsynonymous SNV 0.715 1 27 hm5C_associated_SNPs_27700 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302069 27302069 1 + G T LUAD 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGCCCTCAGCCCCGGGGGGCCCCAGTCCCAGATTGCCCCCC < 41bp 1 0.285515911357695 1 0.494670808315277 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302069 nonsynonymous SNV 0.715 1 26 hm5C_associated_SNPs_27701 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302069 27302069 1 + G T LUAD 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GCCCTCAGCCCCGGGGGGCCCCAGTCCCAGATTGCCCCCCG < 41bp 1 0.437404716660324 1 0.355012893676758 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302069 nonsynonymous SNV 0.715 1 25 hm5C_associated_SNPs_27702 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302069 27302069 1 + G T LUAD 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG CCCTCAGCCCCGGGGGGCCCCAGTCCCAGATTGCCCCCCGG < 41bp 1 0.251460028020696 1 0.670376121997833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302069 nonsynonymous SNV 0.715 1 24 hm5C_associated_SNPs_27703 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr13 52604958 52604958 1 + A T LUAD 52604967 + 52604947 52604987 41 TGAGAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAG TGAGAAGCGCATCATCCACGCAGCAGCTCATCAGGTACAAG < 41bp 1 0.577725678011617 1 0.157740265130997 experiment 0.844548643976766 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604967 chr13:52604958 nonsynonymous SNV 0.922 3 12 hm5C_associated_SNPs_27705 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr13 52604958 52604958 1 + A T LUAD 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGCGCATCATCCACGCAGCAGCTCATCAGGTACAAGTGC < 41bp 1 0.176028313260781 1 0.0679183006286621 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604958 nonsynonymous SNV 0.922 3 9 hm5C_associated_SNPs_27706 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr19 34868423 34868423 1 + G T LUAD 34868408 + 34868388 34868428 41 CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGG CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTTACTGG < 41bp 1 0.211259597405114 1 0.548024535179138 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868408 chr19:34868423 nonsynonymous SNV 0.997 2 36 hm5C_associated_SNPs_27707 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868400-34868440
64251 chr19 34868423 34868423 1 + G T LUAD 34868413 + 34868393 34868433 41 TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGGAAGGG TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTTACTGGAAGGG < 41bp 1 0.673045294375194 1 0.507802367210388 experiment 0.653909411249613 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868413 chr19:34868423 nonsynonymous SNV 0.997 2 31 hm5C_associated_SNPs_27708 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868400-34868440
64251 chr19 34868425 34868425 1 + C T LUAD 34868408 + 34868388 34868428 41 CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGG CATCTTCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGATTGG < 41bp 1 0.204780873905474 1 0.427545875310898 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868408 chr19:34868425 synonymous SNV . 0 38 hm5C_associated_SNPs_27709 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868400-34868440
64251 chr19 34868425 34868425 1 + C T LUAD 34868413 + 34868393 34868433 41 TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGGAAGGG TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGATTGGAAGGG < 41bp 1 0.703903610216931 1 0.442466706037521 experiment 0.592192779566137 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868413 chr19:34868425 synonymous SNV . 0 33 hm5C_associated_SNPs_27710 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34868400-34868440
64251 chr16 67314355 67314355 1 + G A LUAD 67314349 + 67314329 67314369 41 GTAGGGGACCCAGGTCCAAGCAGGGCGATGCCATCTGGCTT GTAGGGGACCCAGGTCCAAGCAGGGCAATGCCATCTGGCTT < 41bp 1 0.766365173863542 1 0.931170105934143 experiment 0.467269652272917 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67314349 chr16:67314355 synonymous SNV . 0 27 hm5C_associated_SNPs_27711 0 0 1 BUD13 POSTAR2 ENCODE chr16:67314321-67314380
64251 chr14 23794478 23794478 1 + T C LUAD 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCACG < 41bp 1 0.282271212107163 1 0.325071275234222 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794478 nonsynonymous SNV 0.995 2 40 hm5C_associated_SNPs_27713 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr14 23794478 23794478 1 + T C LUAD 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCACGG < 41bp 1 0.462661350609192 1 0.556021392345428 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794478 nonsynonymous SNV 0.995 2 39 hm5C_associated_SNPs_27714 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr4 4864774 4864774 1 + C A LUAD 4864793 + 4864773 4864813 41 ACGGTGCCTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTG AAGGTGCCTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTG < 41bp 1 0.785738896150865 1 0.882042706012726 experiment 0.42852220769827 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864793 chr4:4864774 stopgain 0.837 1 2 hm5C_associated_SNPs_27716 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:4864768-4864795
64251 chr1 36029491 36029491 1 + G A LUAD 36029505 + 36029485 36029525 41 GGCCCGGCTCCTTAGCACCTCTCCAGGTAAGAACTGGGGAT GGCCCGACTCCTTAGCACCTCTCCAGGTAAGAACTGGGGAT < 41bp 1 0.707516316125605 1 0.924164652824402 experiment 0.584967367748789 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36029505 chr1:36029491 synonymous SNV . 0 7 hm5C_associated_SNPs_27717 0 0 2 PPIG POSTAR2 ENCODE chr1:36029402-36029496
64251 chr22 38209491 38209491 1 + G T LUAD 38209473 + 38209453 38209493 41 TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGACGCA TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGACTCA < 41bp 1 0.37458389435355 1 0.0333817303180695 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCAT ENSG00000100116 CDS Human protein_coding chr22:38209473 chr22:38209491 nonsynonymous SNV 0.332 5 39 hm5C_associated_SNPs_27718 0 0 3 BUD13 POSTAR2 ENCODE chr22:38209412-38209496
64251 chr22 45958897 45958897 1 + G A LUAD 45958896 + 45958876 45958916 41 CACCAACATCCAAGCGCCCGCGGTGGTTTTCCGCATGGGCC CACCAACATCCAAGCGCCCGCAGTGGTTTTCCGCATGGGCC < 41bp 1 0.34215787740023 1 0.333407163619995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45958896 chr22:45958897 synonymous SNV . 0 22 hm5C_associated_SNPs_27719 0 0 5 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr22:45958892-45958913
64251 chr22 47290698 47290698 1 + C T LUAD 47290696 + 47290676 47290716 41 CCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGT CCAGATCCACATAGACATCCCTTGCATGAGCCCTGAAGCGT < 41bp 1 0.11500182299946 1 0.0681600868701935 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47290696 chr22:47290698 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_27720 0 0 4 GRWD1 POSTAR2 ENCODE chr22:47290686-47290742
64251 chr17 80676907 80676907 1 + G A LUAD 80676908 + 80676888 80676928 41 GGAGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTG GGAGCGTGCTGGTGATGGAACACATGGACATGAGGCATCTG < 41bp 1 0.524809377961316 1 0.0712052881717682 experiment 0.950381244077368 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80676908 chr17:80676907 synonymous SNV . 0 20 hm5C_associated_SNPs_27721 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80676905-80676926
64251 chr17 80676907 80676907 1 + G A LUAD 80676910 + 80676890 80676930 41 AGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTGAG AGCGTGCTGGTGATGGAACACATGGACATGAGGCATCTGAG < 41bp 1 0.69556811109346 1 0.258817791938782 experiment 0.608863777813081 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80676910 chr17:80676907 synonymous SNV . 0 18 hm5C_associated_SNPs_27722 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80676905-80676926
64251 chr12 104336952 104336952 1 + A G LUAD 104336943 + 104336923 104336963 41 GGATGAATACTGTATTCAGGCCCTTCCCGAATTTGATGGGA GGATGAATACTGTATTCAGGCCCTTCCCGGATTTGATGGGA < 41bp 1 0.0754422215884282 1 0.0631937980651855 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336943 chr12:104336952 nonsynonymous SNV 0.990 4 30 hm5C_associated_SNPs_27723 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104336850-104336954
64251 chr12 104336952 104336952 1 + A G LUAD 104336944 + 104336924 104336964 41 GATGAATACTGTATTCAGGCCCTTCCCGAATTTGATGGGAA GATGAATACTGTATTCAGGCCCTTCCCGGATTTGATGGGAA < 41bp 1 0.00562900820583623 1 0.0396439135074615 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336944 chr12:104336952 nonsynonymous SNV 0.990 4 29 hm5C_associated_SNPs_27724 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104336850-104336954
64251 chr8 11643643 11643643 1 + A T LUAD 11643658 + 11643638 11643678 41 CTACCAGAAAGAACAGTGCCCTGCTGGCCACCAGGTCATGA CTACCTGAAAGAACAGTGCCCTGCTGGCCACCAGGTCATGA < 41bp 1 0.446597359712797 1 0.0238261520862579 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11643658 chr8:11643643 nonsynonymous SNV 0.975 1 6 hm5C_associated_SNPs_27725 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:11643633-11643671
64251 chr8 104438329 104438329 1 + G T LUAD 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCATGCTATGGAGACGAGGAAGAGCC < 41bp 1 0.556883579550429 1 0.418458580970764 experiment 0.886232840899141 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438329 nonsynonymous SNV 0.999 1 19 hm5C_associated_SNPs_27727 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr17 3627256 3627256 1 + G T LUAD 3627252 + 3627232 3627272 41 GGCGGCTTCGCTCCCGGGACCTGGGAGCCGGCTTTTCCGCA GGCGGCTTCGCTCCCGGGACCTGGTAGCCGGCTTTTCCGCA < 41bp 1 0.750527022565333 1 0.254200518131256 experiment 0.498945954869334 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HASPIN ENSG00000177602 CDS Human protein_coding chr17:3627252 chr17:3627256 synonymous SNV . 0 25 hm5C_associated_SNPs_27728 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:3627249-3627278
64251 chr2 32339791 32339791 1 + G T LUAD 32339810 + 32339790 32339830 41 GGATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTA GTATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTA < 41bp 1 0.0824888496077982 1 0.0610367059707642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339810 chr2:32339791 nonsynonymous SNV 0.933 0 2 hm5C_associated_SNPs_27729 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:32339781-32339803
64251 chr2 32339791 32339791 1 + G T LUAD 32339811 + 32339791 32339831 41 GATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTAC TATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTAC < 41bp 1 0.760944182678618 1 0.233693331480026 experiment 0.478111634642763 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339811 chr2:32339791 nonsynonymous SNV 0.933 0 1 hm5C_associated_SNPs_27730 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:32339781-32339803
64251 chr12 69966000 69966000 1 + G C LUAD 69966003 + 69965983 69966023 41 ACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGG ACATCCTTCTGTGGGAACTGCTCGCCTGCCTTCAGTAGGGG < 41bp 1 0.472819246213543 1 0.223111033439636 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FRS2 ENSG00000166225 CDS Human protein_coding chr12:69966003 chr12:69966000 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_27732 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:69965984-69966006
64251 chr13 111290831 111290831 1 + A T LUAD 111290847 + 111290827 111290867 41 CATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTG CATGTTCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTG < 41bp 1 0.271589760037309 1 0.164171993732452 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290847 chr13:111290831 nonsynonymous SNV 0.352 2 5 hm5C_associated_SNPs_27734 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr13:111290831-111290832
64251 chrX 110951607 110951607 1 + G T LUAD 110951614 + 110951594 110951634 41 TTGCCTCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAAC TTGCCTCTTTCGGTCCATTTCGGAGCAGGTAAAAGGAAAAC < 41bp 1 0.704712890920547 1 0.780234456062317 experiment 0.590574218158906 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951614 chrX:110951607 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_27735 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:110951484-110951608
64251 chrX 110951607 110951607 1 + G T LUAD 110951619 + 110951599 110951639 41 TCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC TCTTTCGGTCCATTTCGGAGCAGGTAAAAGGAAAACATATC < 41bp 1 0.459031485505257 1 0.802473068237305 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951619 chrX:110951607 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_27736 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:110951484-110951608
64251 chr6 158492658 158492658 1 + G C LUAD 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG AGCCATCGACACAGTGAACACGGGCATGGGGGGCAAGGCGG < 41bp 1 0.756524171890116 1 0.748186409473419 experiment 0.486951656219768 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492658 nonsynonymous SNV 0.989 5 19 hm5C_associated_SNPs_27737 0 0 4 BUD13 POSTAR2 ENCODE chr6:158492654-158492730
64251 chr1 162557435 162557435 1 + A T LUAD 162557436 + 162557416 162557456 41 CCAACCATTTCTTCACTGTACCATTTCTGAGAGATGTTGTC CCAACCATTTCTTCACTGTTCCATTTCTGAGAGATGTTGTC < 41bp 1 0.0750849293515113 1 0.0750334560871124 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UAP1 ENSG00000117143 CDS Human protein_coding chr1:162557436 chr1:162557435 synonymous SNV . 0 20 hm5C_associated_SNPs_27739 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:162557415-162557440
64251 chr12 1517384 1517384 1 + C T LUAD 1517370 + 1517350 1517390 41 CGAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAA CGAGGATGACCACTTCAAATCCTCCCATTCCAATTAAACAA < 41bp 1 0.025899080483186 1 0.0870364010334015 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERC1 ENSG00000082805 CDS Human protein_coding chr12:1517370 chr12:1517384 stopgain 1.000 1 35 hm5C_associated_SNPs_27740 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:1517339-1517386
64251 chr1 55524239 55524239 1 + C T LUAD 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGGCCACAGCCGTTGCCCGCTGCGCCCCAG < 41bp 1 0.199255158805523 1 0.094695508480072 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524239 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_27741 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524239 55524239 1 + C T LUAD 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGGCCACAGCCGTTGCCCGCTGCGCCCCAGA < 41bp 1 0.319364159423831 1 0.0891713798046112 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524239 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_27742 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 44069399 44069399 1 + G T LUAD 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CTGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.406444163777436 1 0.0771441757678986 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069399 nonsynonymous SNV 0.524 3 2 hm5C_associated_SNPs_27743 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr16 14970223 14970223 1 + C T LUAD 14970220 + 14970200 14970240 41 TTTCTTCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGA TTTCTTCCCCTCTTAGAAAGCTGTCCAGGGAAGCTGATCGA < 41bp 1 0.148250777326045 1 0.159753203392029 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14970220 chr16:14970223 synonymous SNV . 0 24 hm5C_associated_SNPs_27744 0 0 2 RPS3 POSTAR2 ENCODE chr16:14970215-14970263
64251 chr16 14970223 14970223 1 + C T LUAD 14970225 + 14970205 14970245 41 TCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGAGATCC TCCCCTCTTAGAAAGCTGTCCAGGGAAGCTGATCGAGATCC < 41bp 1 0.600656648792591 1 0.787354469299316 experiment 0.798686702414818 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14970225 chr16:14970223 synonymous SNV . 0 19 hm5C_associated_SNPs_27745 0 0 2 RPS3 POSTAR2 ENCODE chr16:14970215-14970263
64251 chrX 55029451 55029451 1 + C A LUAD 55029466 + 55029446 55029486 41 CCATGCGGACCCTGGGAGGCCTGAGCGGCTAGTCTTTAAGA CCATGAGGACCCTGGGAGGCCTGAGCGGCTAGTCTTTAAGA < 41bp 1 0.576437508249702 1 0.34744918346405 experiment 0.847124983500597 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55029466 chrX:55029451 nonsynonymous SNV 0.383 4 6 hm5C_associated_SNPs_27746 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:55029447-55029478
64251 chr9 139747556 139747556 1 + G T LUAD 139747567 + 139747547 139747587 41 CCAGCAGCAGGGTCCTCAGGCTGGGCCTGGGTCCCCAACCA CCAGCAGCATGGTCCTCAGGCTGGGCCTGGGTCCCCAACCA < 41bp 1 0.761177803097882 1 0.668060302734375 experiment 0.477644393804237 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139747567 chr9:139747556 nonsynonymous SNV 0.006 1 10 hm5C_associated_SNPs_27757 0 0 1 PPIG POSTAR2 ENCODE chr9:139747554-139747583
64251 chr10 5791121 5791121 1 + G C LUAD 5791136 + 5791116 5791156 41 CTTACGTCCAAATCCGAGATCTCCACGGGATCCTCAGGACT CTTACCTCCAAATCCGAGATCTCCACGGGATCCTCAGGACT < 41bp 1 0.539619118890679 1 0.745938658714294 experiment 0.920761762218643 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5791136 chr10:5791121 nonsynonymous SNV 0.114 1 6 hm5C_associated_SNPs_27758 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5791109-5791263
64251 chr21 47929244 47929244 1 + C T LUAD 47929258 + 47929238 47929278 41 CGCCCTCCACTGAAGGAGTTCTTTGTGGATGATTTTGAGGA CGCCCTTCACTGAAGGAGTTCTTTGTGGATGATTTTGAGGA < 41bp 1 0.069513569529665 1 0.0918294489383698 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47929258 chr21:47929244 nonsynonymous SNV 0.980 4 7 hm5C_associated_SNPs_27759 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr21:47929244-47929245
64251 chr5 179151752 179151752 1 + G A LUAD 179151747 + 179151727 179151767 41 GAGAAGGAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGGA GAGAAGGAAGAGGAAAAGGACAAGGAAGATGAGGAGGAGGA < 41bp 1 0.721274838735292 1 0.495620608329773 experiment 0.557450322529416 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151747 chr5:179151752 nonsynonymous SNV 0.915 0 26 hm5C_associated_SNPs_27760 0 0 57 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:179151700-179151760
64251 chr11 61898026 61898026 1 + A T LUAD 61898007 + 61897987 61898027 41 AGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGAC AGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGTC < 41bp 1 0.608081238781827 1 0.730804026126862 experiment 0.783837522436346 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61898007 chr11:61898026 nonsynonymous SNV 0.348 0 40 hm5C_associated_SNPs_27761 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61898009-61898035
64251 chr11 61898026 61898026 1 + A T LUAD 61898018 + 61897998 61898038 41 CAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGC CAGGGCGAGCAGAAGGCTTGCCAAGAAGTCTGCCGAAGAGC < 41bp 1 0.158487807589496 1 0.136153399944305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61898018 chr11:61898026 nonsynonymous SNV 0.348 0 29 hm5C_associated_SNPs_27762 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61898009-61898035
64251 chr1 154313336 154313336 1 + G T LUAD 154313339 + 154313319 154313359 41 CCCCTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTA CCCCTGTGCAGTGTGGATGTCATCCGTCTGGGCCACAGCTA < 41bp 1 0.20671814551228 1 0.0483338832855225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313339 chr1:154313336 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_27763 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr1 154313336 154313336 1 + G T LUAD 154313342 + 154313322 154313362 41 CTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTACTT CTGTGCAGTGTGGATGTCATCCGTCTGGGCCACAGCTACTT < 41bp 1 0.195184423099079 1 0.0373550355434418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313342 chr1:154313336 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_27764 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr16 624190 624190 1 + C G LUAD 624199 + 624179 624219 41 CCTGCACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCC CCTGCACTTTCGCTTCATCCCCATCCAGGTCAAGCAGCTCC < 41bp 1 0.0656930845398919 1 0.144646614789963 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:624199 chr16:624190 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_27765 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:624182-624206
64251 chr16 624190 624190 1 + C G LUAD 624203 + 624183 624223 41 CACTTTCCCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGC CACTTTCGCTTCATCCCCATCCAGGTCAAGCAGCTCCTGGC < 41bp 1 0.413157435672919 1 0.742486655712128 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:624203 chr16:624190 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_27766 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:624182-624206
64251 chr19 50099244 50099244 1 + G T LUAD 50099242 + 50099222 50099262 41 CATGGGGGTGGCTGGGGACCCAGCTCCCTGGGAGGCGGCGG CATGGGGGTGGCTGGGGACCCATCTCCCTGGGAGGCGGCGG < 41bp 1 0.281880451608524 1 0.239852011203766 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099242 chr19:50099244 nonsynonymous SNV 0.918 1 23 hm5C_associated_SNPs_27768 0 0 3 BUD13 POSTAR2 ENCODE chr19:50099216-50099280
64251 chr22 30415499 30415499 1 + G C LUAD 30415519 + 30415499 30415539 41 GACCACAGCCTGTGACAACACAGTGCCTCTGGCCAGCCGGC CACCACAGCCTGTGACAACACAGTGCCTCTGGCCAGCCGGC < 41bp 1 0.327357170549679 1 0.314727127552032 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30415519 chr22:30415499 synonymous SNV . 0 1 hm5C_associated_SNPs_27769 0 0 1 U2AF2 POSTAR2 ENCODE chr22:30415405-30415515
64251 chr12 112915756 112915756 1 + G A LUAD 112915765 + 112915745 112915785 41 GACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGAT GACTTTTGGCGAATGGTGTTCCAAGAAAACTCCCGAGTGAT < 41bp 1 0.224569946697109 1 0.312247276306152 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915765 chr12:112915756 synonymous SNV . 0 12 hm5C_associated_SNPs_27771 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr12 112915756 112915756 1 + G A LUAD 112915766 + 112915746 112915786 41 ACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGATT ACTTTTGGCGAATGGTGTTCCAAGAAAACTCCCGAGTGATT < 41bp 1 0.766694616651458 1 0.332666754722595 experiment 0.466610766697084 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915766 chr12:112915756 synonymous SNV . 0 11 hm5C_associated_SNPs_27772 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr8 42977938 42977938 1 + C T LUAD 42977935 + 42977915 42977955 41 GACTCCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA GACTCCCTCAGAAAGACCCACTGTCCAGGACGTTCTGGAGA < 41bp 1 0.134387483192483 1 0.21906915307045 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POMK ENSG00000185900 CDS Human protein_coding chr8:42977935 chr8:42977938 nonsynonymous SNV 0.698 3 24 hm5C_associated_SNPs_27776 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977840-42978000
64251 chrX 153677103 153677103 1 + G C LUAD 153677085 + 153677065 153677105 41 CTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG CTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAACAG < 41bp 1 0.718501695587299 1 0.745307683944702 experiment 0.562996608825403 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FAM50A ENSG00000071859 CDS Human protein_coding chrX:153677085 chrX:153677103 nonsynonymous SNV 0.998 4 39 hm5C_associated_SNPs_27777 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:153677095-153677111
64251 chrX 73046540 73046540 1 - G T LUAD 73046526 - 73046506 73046546 41 TGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTG TGGAGGACCATGACCCAGAACCCAGGAAGGATAGAAGCTTG < 41bp 1 0.234893175634283 1 0.242254137992859 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046526 chrX:73046540 . . 0 7 hm5C_associated_SNPs_27785 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046540 73046540 1 - G T LUAD 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA GGAATCTGGAGGACCATGACCCAGAACCCAGGAAGGATAGA < 41bp 1 0.270798992888634 1 0.367590129375458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046540 . . 0 13 hm5C_associated_SNPs_27786 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046540 73046540 1 - G T LUAD 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CGGAATCTGGAGGACCATGACCCAGAACCCAGGAAGGATAG < 41bp 1 0.244199296320732 1 0.128465712070465 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046540 . . 0 14 hm5C_associated_SNPs_27787 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046540 73046540 1 - G T LUAD 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCGGAATCTGGAGGACCATGACCCAGAACCCAGGAA < 41bp 1 0.0759596776059298 1 0.0964268147945404 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046540 . . 0 20 hm5C_associated_SNPs_27788 0 0 85 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chr1 32623006 32623006 1 + G A LUAD 32623004 + 32622984 32623024 41 TTTCTGATGATTCTGACCTGCAGTTAGCAACCACACAGAAA TTTCTGATGATTCTGACCTGCAATTAGCAACCACACAGAAA < 41bp 1 0.0903376733208552 1 0.0394472479820251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32623004 chr1:32623006 synonymous SNV . 0 23 hm5C_associated_SNPs_27789 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32622954-32623029
64251 chr15 25222171 25222171 1 + C A LUAD 25222166 + 25222146 25222186 41 TGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTGAGGAACC TGTCCGAGGAGTTGGGGGACCATCCAAGCAGGTGAGGAACC < 41bp 1 0.154255414447056 1 0.302614748477936 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25222166 chr15:25222171 nonsynonymous SNV 0.987 2 26 hm5C_associated_SNPs_27790 0 0 3 DDX3X POSTAR2 ENCODE chr15:25222120-25222176
64251 chr7 150764060 150764060 1 + G T LUAD 150764061 + 150764041 150764081 41 ACCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGG ACCTCGGGCCCGACCCCGGTCCCCCCACAAGCCCCATGAGG < 41bp 1 0.064686191691985 1 0.118854582309723 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764061 chr7:150764060 nonsynonymous SNV 0.994 0 20 hm5C_associated_SNPs_27791 0 0 3 DDX3X POSTAR2 ENCODE chr7:150764009-150764061
64251 chr7 150764060 150764060 1 + G T LUAD 150764062 + 150764042 150764082 41 CCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGT CCTCGGGCCCGACCCCGGTCCCCCCACAAGCCCCATGAGGT < 41bp 1 0.0454448409725478 1 0.0907803475856781 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764062 chr7:150764060 nonsynonymous SNV 0.994 0 19 hm5C_associated_SNPs_27792 0 0 3 DDX3X POSTAR2 ENCODE chr7:150764009-150764061
64251 chr7 150764060 150764060 1 + G T LUAD 150764063 + 150764043 150764083 41 CTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGTA CTCGGGCCCGACCCCGGTCCCCCCACAAGCCCCATGAGGTA < 41bp 1 0.365779071106711 1 0.194685608148575 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764063 chr7:150764060 nonsynonymous SNV 0.994 0 18 hm5C_associated_SNPs_27793 0 0 3 DDX3X POSTAR2 ENCODE chr7:150764009-150764061
64251 chr1 154317158 154317158 1 + G T LUAD 154317162 + 154317142 154317182 41 TCATCCCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA TCATCCCGCTCCGTAGTCAACGGCTTCACCTATCAGGACAA < 41bp 1 0.424433581074196 1 0.293994426727295 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317162 chr1:154317158 nonsynonymous SNV 0.229 0 17 hm5C_associated_SNPs_27794 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:154317154-154317180
64251 chr1 161179353 161179353 1 + C T LUAD 161179358 + 161179338 161179378 41 CTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAG CTTGGGGCCATGACCTCTTTCTTCTGGCTGTTTGAAGAAAG < 41bp 1 0.293200239662324 1 0.126297801733017 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179358 chr1:161179353 nonsynonymous SNV 0.995 5 16 hm5C_associated_SNPs_27797 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161179326-161179363
64251 chr11 44129620 44129620 1 + G T LUAD 44129604 + 44129584 44129624 41 ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCGTCTC ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCTTCTC < 41bp 1 0.483047031641936 1 0.593658208847046 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129604 chr11:44129620 nonsynonymous SNV 0.003 1 37 hm5C_associated_SNPs_27798 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:44129600-44129620
64251 chr4 144442691 144442691 1 + A T LUAD 144442679 + 144442659 144442699 41 TCAGAAGACTCCAACTTCACCTTTGAAGATGAAACCAGGGC TCAGAAGACTCCAACTTCACCTTTGAAGATGATACCAGGGC < 41bp 1 0.142416528947324 1 0.063342809677124 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144442679 chr4:144442691 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_27799 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:144442680-144442700
64251 chr19 49993733 49993733 1 + G A LUAD 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTAAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC < 41bp 1 0.788278231557913 1 0.425446689128876 experiment 0.423443536884175 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993733 synonymous SNV . 0 5 hm5C_associated_SNPs_27801 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr19:49993701-49993733
64251 chr7 128505563 128505563 1 + A T LUAD 128505545 + 128505525 128505565 41 ATCCCCGCTGTCCTGGAGATCCCCTCCAAGGAGCACCCATA ATCCCCGCTGTCCTGGAGATCCCCTCCAAGGAGCACCCTTA < 41bp 1 0.410666959884419 1 0.145013719797134 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP6V1F ENSG00000128524 CDS Human protein_coding chr7:128505545 chr7:128505563 synonymous SNV . 0 39 hm5C_associated_SNPs_27802 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:128505560-128505580
64251 chrX 73046033 73046033 1 - A T LUAD 73046036 - 73046016 73046056 41 TGTGAAGAGATGCTCCAGGCCAATGAGAAGAATTAGACAAG TGTGAAGAGATGCTCCAGGCCAAAGAGAAGAATTAGACAAG < 41bp 1 0.186478098286491 1 0.489614218473434 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046036 chrX:73046033 . . 0 24 hm5C_associated_SNPs_27803 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046031-73046061
64251 chr15 99459945 99459945 1 + G C LUAD 99459934 + 99459914 99459954 41 CAGGAAGTATGCCGACGGCACCATCGACATTGAGGAGGTCA CAGGAAGTATGCCGACGGCACCATCGACATTCAGGAGGTCA < 41bp 1 0.0105251311648748 1 0.0782961249351501 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99459934 chr15:99459945 nonsynonymous SNV 0.559 2 32 hm5C_associated_SNPs_27804 0 0 2 LIN28A POSTAR2 GSE39873,GSM980593 chr15:99459940-99459960
64251 chr8 73921227 73921227 1 + G A LUAD 73921233 + 73921213 73921253 41 CAGAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTG CAGAGAGAAACGACAAGGAGCAGTTCGAATGCCAGGAACTG < 41bp 1 0.289968952196933 1 0.053587943315506 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921233 chr8:73921227 nonsynonymous SNV 0.266 1 15 hm5C_associated_SNPs_27805 0 0 1 GRWD1 POSTAR2 ENCODE chr8:73921133-73921305
64251 chr12 82752422 82752422 1 + C A LUAD 82752435 + 82752415 82752455 41 TGCAGTTCCTGAGGGATGCCCTGTCCATTTCCAATGCACAT TGCAGTTACTGAGGGATGCCCTGTCCATTTCCAATGCACAT < 41bp 1 0.255869946283402 1 0.0768628716468811 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752435 chr12:82752422 nonsynonymous SNV 0.020 4 8 hm5C_associated_SNPs_27806 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:82752398-82752436
64251 chrX 77373665 77373665 1 + C A LUAD 77373646 + 77373626 77373666 41 CTTGGAGAGCCCAGAGCGACCCTTCCTGGCCATCCTGGGCG CTTGGAGAGCCCAGAGCGACCCTTCCTGGCCATCCTGGGAG < 41bp 1 0.0783190989373745 1 0.052564412355423 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373646 chrX:77373665 synonymous SNV . 0 40 hm5C_associated_SNPs_27809 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:77373639-77373667
64251 chr11 44129611 44129611 1 + G C LUAD 44129604 + 44129584 44129624 41 ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCGTCTC ATCTATGCTCTGAAAAAGTACGTGGATCACTTTGGCGTCTC < 41bp 1 0.507122361457345 1 0.537763714790344 experiment 0.98575527708531 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129604 chr11:44129611 nonsynonymous SNV 0.890 3 28 hm5C_associated_SNPs_27810 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:44129587-44129614
64251 chr4 52740465 52740465 1 + C G LUAD 52740449 + 52740429 52740469 41 TTTTGTAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCT TTTTGTAGGAAGTCTGCGGTCTTGCAGTTCTTCAGAGTGCT < 41bp 1 0.233779261945487 1 0.0648183226585388 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52740449 chr4:52740465 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_27811 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:52740434-52740474
64251 chr2 216197222 216197222 1 + G T LUAD 216197204 + 216197184 216197224 41 TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCC TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCATCC < 41bp 1 0.0492299759286358 1 0.0804571807384491 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197204 chr2:216197222 nonsynonymous SNV 0.997 4 39 hm5C_associated_SNPs_27817 0 0 6 FXR2 POSTAR2 ENCODE chr2:216197195-216197231
64251 chr2 216197222 216197222 1 + G T LUAD 216197205 + 216197185 216197225 41 TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCCC TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCATCCC < 41bp 1 0.345818310739225 1 0.167264372110367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197205 chr2:216197222 nonsynonymous SNV 0.997 4 38 hm5C_associated_SNPs_27818 0 0 6 FXR2 POSTAR2 ENCODE chr2:216197195-216197231
64251 chr12 50834321 50834321 1 + G T LUAD 50834317 + 50834297 50834337 41 TATATCACTTTCCAGTCAGACACAGATGCACAACAGGTAAG TATATCACTTTCCAGTCAGACACATATGCACAACAGGTAAG < 41bp 1 0.374805813947963 1 0.238812416791916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LARP4 ENSG00000161813 CDS Human protein_coding chr12:50834317 chr12:50834321 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_27819 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:50834295-50834331
64251 chr7 139107013 139107013 1 + G A LUAD 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAAGATAAGAAGCAGTCCTATGAGAGTGCTAAT < 41bp 1 0.163225895841925 1 0.350177943706512 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107013 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_27824 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107013 139107013 1 + G A LUAD 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGAAGCAGTCCTATGAGAGTGCTAATGGCA < 41bp 1 0.126564525090279 1 0.15170019865036 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107013 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_27825 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107013 139107013 1 + G A LUAD 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGCAGTCCTATGAGAGTGCTAATGGCAG < 41bp 1 0.191703453073067 1 0.084985077381134 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107013 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_27826 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107013 139107013 1 + G A LUAD 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGCAGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA < 41bp 1 0.317482884653027 1 0.172483146190643 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107013 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_27827 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr16 46960903 46960903 1 + G A LUAD 46960906 + 46960886 46960926 41 AGACTGGCATCTGTGTCGTGCCCGGCAGTGGCTTTGGGCAG AGACTGGCATCTGTGTCATGCCCGGCAGTGGCTTTGGGCAG < 41bp 1 0.440644537985526 1 0.131890505552292 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPT2 ENSG00000166123 CDS Human protein_coding chr16:46960906 chr16:46960903 nonsynonymous SNV 0.852 4 18 hm5C_associated_SNPs_27831 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:46960894-46960921
64251 chr1 183502906 183502906 1 + A G LUAD 183502902 + 183502882 183502922 41 CCTCTTCCAGCAGTCAAGGTCTCCATGGACTGGCTAAGACT CCTCTTCCAGCAGTCAAGGTCTCCGTGGACTGGCTAAGACT < 41bp 1 0.637375408889937 1 0.911670506000519 experiment 0.725249182220126 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SMG7 ENSG00000116698 CDS Human protein_coding chr1:183502902 chr1:183502906 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_27832 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:183502876-183502926
64251 chr6 20402610 20402610 1 + C T LUAD 20402600 + 20402580 20402620 41 AGCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCG AGCCAGCCCCGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCG < 41bp 1 0.310505353486371 1 0.506156921386719 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402600 chr6:20402610 synonymous SNV 0.188 0 31 hm5C_associated_SNPs_27833 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402601 + 20402581 20402621 41 GCCAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGC GCCAGCCCCGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGC < 41bp 1 0.769336884576328 1 0.866001129150391 experiment 0.461326230847343 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402601 chr6:20402610 synonymous SNV 0.188 0 30 hm5C_associated_SNPs_27834 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402603 + 20402583 20402623 41 CAGCCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCC CAGCCCCGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCC < 41bp 1 0.271353864766497 1 0.44832307100296 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402603 chr6:20402610 synonymous SNV 0.188 0 28 hm5C_associated_SNPs_27835 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402606 + 20402586 20402626 41 CCCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGG CCCCGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGG < 41bp 1 0.501471767121656 1 0.678372502326965 experiment 0.997056465756687 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402606 chr6:20402610 synonymous SNV 0.188 0 25 hm5C_associated_SNPs_27836 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402607 + 20402587 20402627 41 CCCGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGG CCCGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGG < 41bp 1 0.645435906838177 1 0.707731962203979 experiment 0.709128186323646 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402607 chr6:20402610 synonymous SNV 0.188 0 24 hm5C_associated_SNPs_27837 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402609 + 20402589 20402629 41 CGGCTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCG CGGCTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCG < 41bp 1 0.682185604333725 1 0.561073184013367 experiment 0.635628791332549 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402609 chr6:20402610 synonymous SNV 0.188 0 22 hm5C_associated_SNPs_27838 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402612 + 20402592 20402632 41 CTTCGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGT CTTCGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGCGT < 41bp 1 0.612779082462604 1 0.197890639305115 experiment 0.774441835074791 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402612 chr6:20402610 synonymous SNV 0.188 0 19 hm5C_associated_SNPs_27839 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402615 + 20402595 20402635 41 CGCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACA CGCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGCGTACA < 41bp 1 0.273269214531102 1 0.529189944267273 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402615 chr6:20402610 synonymous SNV 0.188 0 16 hm5C_associated_SNPs_27840 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402616 + 20402596 20402636 41 GCCGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACAT GCCGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGCGTACAT < 41bp 1 0.783837225954607 1 0.733427107334137 experiment 0.432325548090785 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402616 chr6:20402610 synonymous SNV 0.188 0 15 hm5C_associated_SNPs_27841 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402618 + 20402598 20402638 41 CGCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCC CGCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGCGTACATCC < 41bp 1 0.276704324922268 1 0.569888472557068 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402618 chr6:20402610 synonymous SNV 0.188 0 13 hm5C_associated_SNPs_27842 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr6 20402610 20402610 1 + C T LUAD 20402619 + 20402599 20402639 41 GCCGCCGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCCA GCCGCCGCCGCTGCTGCCGCCGCCCCGGGCGCGTACATCCA < 41bp 1 0.430889972748594 1 0.416054487228394 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402619 chr6:20402610 synonymous SNV 0.188 0 12 hm5C_associated_SNPs_27843 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:20402600-20402620
64251 chr2 109347334 109347334 1 + G A LUAD 109347326 + 109347306 109347346 41 GAAGAAAACACAGACAAAGCCGTTGAATGTTACAGGGTAAG GAAGAAAACACAGACAAAGCCGTTGAATATTACAGGGTAAG < 41bp 1 0.0699850140326796 1 0.15068507194519 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347326 chr2:109347334 nonsynonymous SNV 0.997 2 29 hm5C_associated_SNPs_27856 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109347298-109347338
64251 chr3 43389307 43389307 1 + C T LUAD 43389320 + 43389300 43389340 41 GCTTCTCCAGGTACAGTTCACAAACGCTACCACCGGAGGAA GCTTCTCTAGGTACAGTTCACAAACGCTACCACCGGAGGAA < 41bp 1 0.438226005921416 1 0.117023319005966 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNRK ENSG00000163788 CDS Human protein_coding chr3:43389320 chr3:43389307 nonsynonymous SNV 0.009 3 8 hm5C_associated_SNPs_27857 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr3:43389300-43389320
64251 chr22 29678498 29678498 1 + G A LUAD 29678503 + 29678483 29678523 41 CCCAGGTACCTGGGAGCTACCCCATGCAGCCAGTCACTGCA CCCAGGTACCTGGGAACTACCCCATGCAGCCAGTCACTGCA < 41bp 1 0.381112836306496 1 0.369398057460785 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29678503 chr22:29678498 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_27858 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:29678480-29678500
64251 chr12 120899848 120899848 1 - A G LUAD 120899856 - 120899836 120899876 41 TCCATACCAAAGCAGGGGTTCCCCACACTACTTCTCTCCTT TCCATACCAAAGCAGGGGTTCCCCACACCACTTCTCTCCTT < 41bp 1 0.570806074147195 1 0.234200596809387 experiment 0.85838785170561 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF9 ENSG00000111786 CDS Human protein_coding chr12:120899856 chr12:120899848 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_27860 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:120899806-120899926
64251 chr6 24423250 24423250 1 + G A LUAD 24423252 + 24423232 24423272 41 TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCCATTGCCT TGCTTTCATTCCTTGGACAACAGCTAGAAGCTCCATTGCCT < 41bp 1 0.544319083734345 1 0.0709159374237061 experiment 0.911361832531309 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423252 chr6:24423250 nonsynonymous SNV 0.979 3 19 hm5C_associated_SNPs_27862 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:24423234-24423265
64251 chr3 49060179 49060179 1 + C T LUAD 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCGAAGACAGCTTTTCCCTCTTTTGGTTGCTGGAGCCC < 41bp 1 0.44821467824457 1 0.439153492450714 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060179 synonymous SNV . 0 26 hm5C_associated_SNPs_27863 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:49060168-49060196
64251 chr19 50027842 50027842 1 + A G LUAD 50027862 + 50027842 50027882 41 ACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG GCCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG < 41bp 1 0.525964403078459 1 0.707493603229523 experiment 0.948071193843083 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027862 chr19:50027842 nonsynonymous SNV 0.994 3 1 hm5C_associated_SNPs_27864 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50027819-50027859
64251 chr1 22816582 22816582 1 + C G LUAD 22816595 + 22816575 22816615 41 CCAGCCTCCTGTTCAAAACCCTGCTGGATAACACAGATACC CCAGCCTGCTGTTCAAAACCCTGCTGGATAACACAGATACC < 41bp 1 0.302805237817254 1 0.431686848402023 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22816595 chr1:22816582 synonymous SNV . 0 8 hm5C_associated_SNPs_27865 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:22816572-22816602
64251 chr9 134350175 134350175 1 + G C LUAD 134350189 + 134350169 134350209 41 GGTGTTGAGCGGGAGACACCCCGGGAGGGGACGGCCTTTAA GGTGTTCAGCGGGAGACACCCCGGGAGGGGACGGCCTTTAA < 41bp 1 0.625086527152662 1 0.828675091266632 experiment 0.749826945694676 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134350189 chr9:134350175 nonsynonymous SNV 0.004 1 7 hm5C_associated_SNPs_27866 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:134350175-134350176
64251 chrX 153780355 153780355 1 + C A LUAD 153780337 + 153780317 153780357 41 GGGAAGCCAGCCATGCTGCACCTGCCTTCAGAACAGGGCGC GGGAAGCCAGCCATGCTGCACCTGCCTTCAGAACAGGGAGC < 41bp 1 0.0632389968665864 1 0.0816952884197235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IKBKG ENSG00000073009 CDS Human other chrX:153780337 chrX:153780355 synonymous SNV . 0 39 hm5C_associated_SNPs_27867 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:153780340-153780360
64251 chrX 107807133 107807133 1 + C A LUAD 107807137 + 107807117 107807157 41 TGATGGAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG TGATGGAATTCCAGGGACACCAGGACCAAAAGGAATCAGAG < 41bp 1 0.551753740514038 1 0.663913726806641 experiment 0.896492518971924 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107807137 chrX:107807133 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_27868 0 0 3 BUD13 POSTAR2 ENCODE chrX:107807116-107807157
64251 chr13 115090570 115090570 1 + A C LUAD 115090577 + 115090557 115090597 41 CCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC CCAGTGTCTCCAGCGCTTCGCAAACCCGGCCCACCACTATC < 41bp 1 0.270038048757439 1 0.0909949243068695 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090577 chr13:115090570 nonsynonymous SNV 0.995 4 14 hm5C_associated_SNPs_27869 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr1 145663206 145663206 1 + C G LUAD 145663218 + 145663198 145663238 41 TTTAGACCCTTTCTAAGTAGCAGTCCACTGGACCAAGATAA TTTAGACCGTTTCTAAGTAGCAGTCCACTGGACCAAGATAA < 41bp 1 0.0725401530562562 1 0.159899920225143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663218 chr1:145663206 synonymous SNV . 0 9 hm5C_associated_SNPs_27870 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663201-145663221
64251 chr11 34167643 34167643 1 + G A LUAD 34167634 + 34167614 34167654 41 TTTTGATTTTTCTCTAGTGACAAGAAAAGGAAGTTAGAGGC TTTTGATTTTTCTCTAGTGACAAGAAAAGAAAGTTAGAGGC < 41bp 1 0.678463524583384 1 0.429255723953247 experiment 0.643072950833232 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34167634 chr11:34167643 synonymous SNV . 0 30 hm5C_associated_SNPs_27871 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:34167640-34167660
64251 chr9 96427980 96427980 1 + C G LUAD 96427976 + 96427956 96427996 41 CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACGAGCC CTTCTGCCCTAGCTCCAAGGCTCTGAGGCCCCCGACGAGCC < 41bp 1 0.363211997510366 1 0.319164365530014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96427976 chr9:96427980 synonymous SNV . 0 25 hm5C_associated_SNPs_27872 0 0 1 AGGF1 POSTAR2 ENCODE chr9:96427969-96427995
64251 chr15 96877535 96877535 1 + G T LUAD 96877544 + 96877524 96877564 41 TCAGCGCCGTCGAGTGGGCCCGGAACATCCCCTTCTTCCCC TCAGCGCCGTCTAGTGGGCCCGGAACATCCCCTTCTTCCCC < 41bp 1 0.746147952913048 1 0.2829270362854 experiment 0.507704094173904 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877544 chr15:96877535 stopgain 1.000 1 12 hm5C_associated_SNPs_27873 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:96877460-96877560
64251 chr9 37430611 37430611 1 + G A LUAD 37430599 + 37430579 37430619 41 GGACTCTGCAACAAGGACTTCTTCCAGAAGATGAAGGAAAC GGACTCTGCAACAAGGACTTCTTCCAGAAGATAAAGGAAAC < 41bp 1 0.0911362893109481 1 0.116466492414474 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37430599 chr9:37430611 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_27875 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:37430570-37430619
64251 chr12 57626980 57626980 1 + A T LUAD 57626998 + 57626978 57627018 41 CTACCGGAAAGGGGTGAAGGCTGTGGACCCCAAGACTGGCC CTTCCGGAAAGGGGTGAAGGCTGTGGACCCCAAGACTGGCC < 41bp 1 0.668096020222403 1 0.367713093757629 experiment 0.663807959555193 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57626998 chr12:57626980 nonsynonymous SNV 0.998 0 3 hm5C_associated_SNPs_27876 0 0 34 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:57626960-57626980
64251 chr2 220366640 220366640 1 + G T LUAD 220366650 + 220366630 220366670 41 CCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCA CCAGATCCTGTCTGGGAGCCCCGAGGCATTCTTCGTGCTCA < 41bp 1 0.481088142870738 1 0.292835235595703 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366650 chr2:220366640 nonsynonymous SNV 0.991 1 11 hm5C_associated_SNPs_27877 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:220366619-220366655
64251 chr19 49968019 49968019 1 + G T LUAD 49968003 + 49967983 49968023 41 CCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGA CCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCATGTGA < 41bp 1 0.262369924670498 1 0.0770179927349091 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968003 chr19:49968019 nonsynonymous SNV 0.846 0 37 hm5C_associated_SNPs_27878 0 0 4 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968019 49968019 1 + G T LUAD 49968004 + 49967984 49968024 41 CTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGGTGAG CTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCATGTGAG < 41bp 1 0.515016160099612 1 0.478860944509506 experiment 0.969967679800777 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968004 chr19:49968019 nonsynonymous SNV 0.846 0 36 hm5C_associated_SNPs_27879 0 0 4 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968019 49968019 1 + G T LUAD 49968015 + 49967995 49968035 41 CGGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGC CGGCTGGGCCTGAAATAGGGCCCATGTGAGTCGTTGGGGGC < 41bp 1 0.103017834602064 1 0.155975908041 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968015 chr19:49968019 nonsynonymous SNV 0.846 0 25 hm5C_associated_SNPs_27880 0 0 4 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968019 49968019 1 + G T LUAD 49968016 + 49967996 49968036 41 GGCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCC GGCTGGGCCTGAAATAGGGCCCATGTGAGTCGTTGGGGGCC < 41bp 1 0.0672045060796165 1 0.16939714550972 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968016 chr19:49968019 nonsynonymous SNV 0.846 0 24 hm5C_associated_SNPs_27881 0 0 4 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr19 49968019 49968019 1 + G T LUAD 49968017 + 49967997 49968037 41 GCTGGGCCTGAAATAGGGCCCAGGTGAGTCGTTGGGGGCCA GCTGGGCCTGAAATAGGGCCCATGTGAGTCGTTGGGGGCCA < 41bp 1 0.340958609498835 1 0.19001516699791 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49968017 chr19:49968019 nonsynonymous SNV 0.846 0 23 hm5C_associated_SNPs_27882 0 0 4 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr20 2844844 2844844 1 + G A LUAD 2844855 + 2844835 2844875 41 ATGAGCCACGCTCAGGGGAGCAGGTACCCCTTCTCCTAAAG ATGAGCCACACTCAGGGGAGCAGGTACCCCTTCTCCTAAAG < 41bp 1 0.423240711716761 1 0.429373681545258 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VPS16 ENSG00000215305 CDS Human protein_coding chr20:2844855 chr20:2844844 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_27883 0 0 3 BUD13 POSTAR2 ENCODE chr20:2844810-2844851
64251 chr11 2424074 2424074 1 + G T LUAD 2424079 + 2424059 2424099 41 CCCTCACCCCCGTCAGGCCTCCTCCCAGCCACGGTGCAGCC CCCTCACCCCCGTCATGCCTCCTCCCAGCCACGGTGCAGCC < 41bp 1 0.0475254328323795 1 0.067098081111908 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSSC4;TSSC4 ENSG00000184281;ENSG00000184281 exonic;splicing Human other chr11:2424079 chr11:2424074 nonsynonymous SNV 0.023 2 16 hm5C_associated_SNPs_27884 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:2424058-2424086
64251 chr10 124914503 124914503 1 + C T LUAD 124914484 + 124914464 124914504 41 CAGCCACCCGAGGATGGCATCTCCTCCGTGAAGTTCAGCCC CAGCCACCCGAGGATGGCATCTCCTCCGTGAAGTTCAGCTC < 41bp 1 0.628562379219649 1 0.349489450454712 experiment 0.742875241560702 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control BUB3 ENSG00000154473 CDS Human protein_coding chr10:124914484 chr10:124914503 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_27887 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:124914433-124914515
64251 chr13 113907459 113907459 1 + C T LUAD 113907465 + 113907445 113907485 41 GTGGTCGAAAACTTCAGTGGCAAACTACTTTGGGACATGCT GTGGTCGAAAACTTTAGTGGCAAACTACTTTGGGACATGCT < 41bp 1 0.0618262709877593 1 0.110947489738464 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CUL4A ENSG00000139842 CDS Human protein_coding chr13:113907465 chr13:113907459 stopgain 0.217 1 15 hm5C_associated_SNPs_27888 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113907453-113907491
64251 chr5 139876809 139876809 1 + A G LUAD 139876806 + 139876786 139876826 41 TAGTTCAAGAACCAGATGGACTAATGGTTGCAACTCCAGCT TAGTTCAAGAACCAGATGGACTAGTGGTTGCAACTCCAGCT < 41bp 1 0.283445040713981 1 0.0999603569507599 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139876806 chr5:139876809 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_27890 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:139876713-139876820
64251 chr20 47896877 47896877 1 + G A LUAD 47896873 + 47896853 47896893 41 CCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAG CCTGCTGGCATATATGATGACTTAACTTTTTTCCCCGACAG < 41bp 1 0.214617326319569 1 0.0583614408969879 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896873 chr20:47896877 . . 0 25 hm5C_associated_SNPs_27891 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896877 47896877 1 + G A LUAD 47896878 + 47896858 47896898 41 TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGA TGGCATATATGATGACTTAACTTTTTTCCCCGACAGATCGA < 41bp 1 0.0674879942196715 1 0.0598800778388977 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896878 chr20:47896877 . . 0 20 hm5C_associated_SNPs_27892 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896877 47896877 1 + G A LUAD 47896885 + 47896865 47896905 41 TATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTT TATGATGACTTAACTTTTTTCCCCGACAGATCGACTATGTT < 41bp 1 0.125581976516087 1 0.0400890111923218 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896885 chr20:47896877 . . 0 13 hm5C_associated_SNPs_27893 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896877 47896877 1 + G A LUAD 47896886 + 47896866 47896906 41 ATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG ATGATGACTTAACTTTTTTCCCCGACAGATCGACTATGTTG < 41bp 1 0.406083050771976 1 0.0527702569961548 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896886 chr20:47896877 . . 0 12 hm5C_associated_SNPs_27894 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896877 47896877 1 + G A LUAD 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATGACTTAACTTTTTTCCCCGACAGATCGACTATGTTGA < 41bp 1 0.0574240532200131 1 0.0829007029533386 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896877 . . 0 11 hm5C_associated_SNPs_27895 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr6 7594075 7594075 1 + G T LUAD 7594067 + 7594047 7594087 41 ATTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCAT ATTGAGGAAAATGGGCTATACCAAAGAATAAGAGGTACCAT < 41bp 1 0.446514911653862 1 0.225918382406235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594067 chr6:7594075 stopgain 1.000 1 29 hm5C_associated_SNPs_27897 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr6 7594075 7594075 1 + G T LUAD 7594068 + 7594048 7594088 41 TTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCATA TTGAGGAAAATGGGCTATACCAAAGAATAAGAGGTACCATA < 41bp 1 0.603577405377783 1 0.478912651538849 experiment 0.792845189244435 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594068 chr6:7594075 stopgain 1.000 1 28 hm5C_associated_SNPs_27898 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr9 124062262 124062262 1 + G A LUAD 124062243 + 124062223 124062263 41 CACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAGG CACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAAG < 41bp 1 0.579402267597098 1 0.860199689865112 experiment 0.841195464805805 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062243 chr9:124062262 synonymous SNV . 0 40 hm5C_associated_SNPs_27899 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062262 124062262 1 + G A LUAD 124062244 + 124062224 124062264 41 ACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAGGG ACTGCGTCGCGGGGGGCGTCCCAGGCGGGGGCGCCCCAAGG < 41bp 1 0.718762998006518 1 0.832519888877869 experiment 0.562474003986963 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062244 chr9:124062262 synonymous SNV . 0 39 hm5C_associated_SNPs_27900 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062262 124062262 1 + G A LUAD 124062255 + 124062235 124062275 41 GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCG GGGGGCGTCCCAGGCGGGGGCGCCCCAAGGGCGGGTGCCCG < 41bp 1 0.467657404422299 1 0.526512503623962 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062255 chr9:124062262 synonymous SNV . 0 28 hm5C_associated_SNPs_27901 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062262 124062262 1 + G A LUAD 124062257 + 124062237 124062277 41 GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAG GGGCGTCCCAGGCGGGGGCGCCCCAAGGGCGGGTGCCCGAG < 41bp 1 0.624868439579306 1 0.650750637054443 experiment 0.750263120841388 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062257 chr9:124062262 synonymous SNV . 0 26 hm5C_associated_SNPs_27902 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062262 124062262 1 + G A LUAD 124062258 + 124062238 124062278 41 GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGG GGCGTCCCAGGCGGGGGCGCCCCAAGGGCGGGTGCCCGAGG < 41bp 1 0.583793076928708 1 0.839473366737366 experiment 0.832413846142585 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062258 chr9:124062262 synonymous SNV . 0 25 hm5C_associated_SNPs_27903 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062262 124062262 1 + G A LUAD 124062259 + 124062239 124062279 41 GCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGGC GCGTCCCAGGCGGGGGCGCCCCAAGGGCGGGTGCCCGAGGC < 41bp 1 0.65898559023049 1 0.824453473091125 experiment 0.682028819539021 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062259 chr9:124062262 synonymous SNV . 0 24 hm5C_associated_SNPs_27904 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 132630324 132630324 1 + A G LUAD 132630317 + 132630297 132630337 41 TCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAG TCCTTCGCTGCCTGATGGACCAGCTGCGCGAGGAGCTCAAG < 41bp 1 0.420198645859395 1 0.741850078105927 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132630317 chr9:132630324 nonsynonymous SNV 0.985 4 28 hm5C_associated_SNPs_27905 0 0 6 DDX24 POSTAR2 ENCODE chr9:132630299-132630326
64251 chr19 18545055 18545055 1 + G A LUAD 18545070 + 18545050 18545090 41 CGTGTGATGGGGCGGCAGCCCCGGGCCTCTCTGCGGGCCTA CGTGTAATGGGGCGGCAGCCCCGGGCCTCTCTGCGGGCCTA < 41bp 1 0.754799212116832 1 0.668955326080322 experiment 0.490401575766336 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18545070 chr19:18545055 synonymous SNV . 0 6 hm5C_associated_SNPs_27907 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18544990-18545055
64251 chr1 10195123 10195123 1 + C G LUAD 10195142 + 10195122 10195162 41 TCAAGTTAGAAACAGTTGATCCCACGTATATTTTTCACCCA TGAAGTTAGAAACAGTTGATCCCACGTATATTTTTCACCCA < 41bp 1 0.0983476020209919 1 0.260007798671722 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10195142 chr1:10195123 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_27908 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:10195086-10195161
64251 chr2 207636950 207636950 1 + A T LUAD 207636939 + 207636919 207636959 41 TGTCCTTTAAGAATAATGATCAACATATTGCAGTCCTGCAA TGTCCTTTAAGAATAATGATCAACATATTGCTGTCCTGCAA < 41bp 1 0.683318686499703 1 0.568081855773926 experiment 0.633362627000594 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207636939 chr2:207636950 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_27909 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:207636923-207636963
64251 chr4 20568908 20568908 1 + G T LUAD 20568888 + 20568868 20568908 41 TTTGAATTAATTTTCAGGTCCTGTGGATGTCAATATTCTAG TTTGAATTAATTTTCAGGTCCTGTGGATGTCAATATTCTAT < 41bp 1 0.0679269282410095 1 0.0936455726623535 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568888 chr4:20568908 nonsynonymous SNV 0.996 2 41 hm5C_associated_SNPs_27910 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr4:20568900-20568920
64251 chr16 30680938 30680938 1 + G A LUAD 30680941 + 30680921 30680961 41 CAGTTCCCCACCTAGGGGCCCTGGCCCAGCTCGGGCTGACA CAGTTCCCCACCTAGGGACCCTGGCCCAGCTCGGGCTGACA < 41bp 1 0.285210837545704 1 0.048780083656311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30680941 chr16:30680938 nonsynonymous SNV 0.997 1 18 hm5C_associated_SNPs_27914 0 0 1 RBM15 POSTAR2 ENCODE chr16:30680891-30680941
64251 chr4 123814181 123814181 1 - G A LUAD 123814174 - 123814154 123814194 41 AGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACA AGTGGATGGATCTTAATGACCTGGCGAAGACTGAAAATACA < 41bp 1 0.654447662427494 1 0.339033782482147 experiment 0.691104675145013 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814174 chr4:123814181 synonymous SNV . 0 14 hm5C_associated_SNPs_27915 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:123814156-123814184
64251 chr18 77474845 77474845 1 + G C LUAD 77474860 + 77474840 77474880 41 CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT CAGCACTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT < 41bp 1 0.566145544253497 1 0.184742093086243 experiment 0.867708911493006 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474860 chr18:77474845 nonsynonymous SNV 0.001 0 6 hm5C_associated_SNPs_27918 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:77474843-77474858
64251 chr7 23221741 23221741 1 + C T LUAD 23221740 + 23221720 23221760 41 TTCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTG TTCTTCCTTCAAGGCCGGTGCTGCTTTGGAGATCGGTGCTG < 41bp 1 0.62584007368036 1 0.388384103775024 experiment 0.74831985263928 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221740 chr7:23221741 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_27929 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr1 242042435 242042435 1 + C T LUAD 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTTCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC < 41bp 1 0.184012596648262 1 0.119661122560501 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042435 synonymous SNV . 0 9 hm5C_associated_SNPs_27945 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:242042419-242042458
64251 chr1 161088957 161088957 1 + C G LUAD 161088961 + 161088941 161088981 41 TCTCCTCTTCCTCCTGCGAACTGCCCCTGGTGGCTGTGTGC TCTCCTCTTCCTCCTGGGAACTGCCCCTGGTGGCTGTGTGC < 41bp 1 0.334420966947984 1 0.139046162366867 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088961 chr1:161088957 nonsynonymous SNV 0.994 0 17 hm5C_associated_SNPs_27946 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161088929-161088958
64251 chr8 145151603 145151603 1 + C T LUAD 145151587 + 145151567 145151607 41 TCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGCCATG TCTACTTCAACCCCTACTTTCCTGGCCAGGCCATTGTCATG < 41bp 1 0.271126506822988 1 0.144103318452835 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151587 chr8:145151603 nonsynonymous SNV 0.981 1 37 hm5C_associated_SNPs_27947 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr8:145151585-145151621
64251 chr7 98564667 98564667 1 + C T LUAD 98564687 + 98564667 98564707 41 CCTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGATGAT TCTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGATGAT < 41bp 1 0.011046855933054 1 0.0873718559741974 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98564687 chr7:98564667 nonsynonymous SNV 0.991 4 1 hm5C_associated_SNPs_27954 0 0 8 EWSR1 POSTAR2 SRX029344 chr7:98564663-98564693
64251 chr17 78350164 78350164 1 + C T LUAD 78350171 + 78350151 78350191 41 TCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATT TCCTGATATCAGCTGTTTTGCAACATCGCTCGTGGACAATT < 41bp 1 0.189987635145485 1 0.186686247587204 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78350171 chr17:78350164 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_27958 0 0 4 DDX24 POSTAR2 ENCODE chr17:78350164-78350230
64251 chr15 22933576 22933576 1 + A G LUAD 22933564 + 22933544 22933584 41 TCTTTTTGTTTTCAAAGGGCCGCTCAGTTTTTACGTAAAAT TCTTTTTGTTTTCAAAGGGCCGCTCAGTTTTTGCGTAAAAT < 41bp 1 0.023396885405211 1 0.0872916877269745 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22933564 chr15:22933576 synonymous SNV . 0 33 hm5C_associated_SNPs_27959 0 0 1 BUD13 POSTAR2 ENCODE chr15:22933568-22933617
64251 chr17 39975577 39975577 1 + C T LUAD 39975559 + 39975539 39975579 41 CAGCTAGAGACGCTGGAGCTCCCCCCCGGCTGTGTCCGCAG CAGCTAGAGACGCTGGAGCTCCCCCCCGGCTGTGTCCGTAG < 41bp 1 0.192069725256799 1 0.155062645673752 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39975559 chr17:39975577 synonymous SNV . 0 39 hm5C_associated_SNPs_27961 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:39975576-39975608
64251 chr11 34129826 34129826 1 + A G LUAD 34129843 + 34129823 34129863 41 AGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG AGTGGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG < 41bp 1 0.207765311762391 1 0.140373289585114 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129843 chr11:34129826 synonymous SNV . 0 4 hm5C_associated_SNPs_27962 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34129799-34129855
64251 chr6 44219848 44219848 1 + C T LUAD 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTTAAGGA < 41bp 1 0.465081340937739 1 0.0382607579231262 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219848 synonymous SNV . 0 36 hm5C_associated_SNPs_27979 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219848 44219848 1 + C T LUAD 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACGAGTACTGTGTGCAGCAGCTTAAGGAATTTGAT < 41bp 1 0.631795764364468 1 0.199734836816788 experiment 0.736408471271063 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219848 synonymous SNV . 0 29 hm5C_associated_SNPs_27980 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219848 44219848 1 + C T LUAD 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACGAGTACTGTGTGCAGCAGCTTAAGGAATTTGATGGGAAG < 41bp 1 0.468875099075038 1 0.162399798631668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219848 synonymous SNV . 0 23 hm5C_associated_SNPs_27981 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr17 79080634 79080634 1 + G A LUAD 79080643 + 79080623 79080663 41 CGCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCT CGCCGCCTCCCAGGCCTTCCCCGCCCAGACGGCCAGCGGCT < 41bp 1 0.359387822880769 1 0.307876706123352 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080643 chr17:79080634 nonsynonymous SNV 0.410 0 12 hm5C_associated_SNPs_27982 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr17 79080634 79080634 1 + G A LUAD 79080644 + 79080624 79080664 41 GCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCTT GCCGCCTCCCAGGCCTTCCCCGCCCAGACGGCCAGCGGCTT < 41bp 1 0.549955810087659 1 0.0773421227931976 experiment 0.900088379824683 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080644 chr17:79080634 nonsynonymous SNV 0.410 0 11 hm5C_associated_SNPs_27983 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr9 124534959 124534959 1 + G T LUAD 124534965 + 124534945 124534985 41 TCACAAGGTCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGC TCACAAGGTCCTCCTGGGTCCAGCCCTCACCTGCCCGCAGC < 41bp 1 0.249875127520996 1 0.108974456787109 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124534965 chr9:124534959 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_27984 0 0 2 RBM15 POSTAR2 ENCODE chr9:124534937-124534985
64251 chr4 79766106 79766106 1 + G A LUAD 79766114 + 79766094 79766134 41 TTGTTGAATGATGGTGGGAACTATGTACTTTGTGACTTTGG TTGTTGAATGATAGTGGGAACTATGTACTTTGTGACTTTGG < 41bp 1 0.0997983222201379 1 0.123295783996582 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP2K ENSG00000138756 CDS Human protein_coding chr4:79766114 chr4:79766106 nonsynonymous SNV 0.985 0 13 hm5C_associated_SNPs_27986 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr4:79766078-79766114
64251 chr1 214819597 214819597 1 + A G LUAD 214819612 + 214819592 214819632 41 TCAGAACTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT TCAGAGCTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT < 41bp 1 0.0658525669851567 1 0.0951880216598511 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819612 chr1:214819597 synonymous SNV . 0 6 hm5C_associated_SNPs_27987 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:214819565-214819604
64251 chr17 21731049 21731049 1 + G T LUAD 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGACCAGCATAGGCTCATCTT < 41bp 1 0.266031715391186 1 0.405216634273529 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731049 nonsynonymous SNV 0.900 3 30 hm5C_associated_SNPs_27989 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr4 79766107 79766107 1 + G T LUAD 79766114 + 79766094 79766134 41 TTGTTGAATGATGGTGGGAACTATGTACTTTGTGACTTTGG TTGTTGAATGATGTTGGGAACTATGTACTTTGTGACTTTGG < 41bp 1 0.11563220066483 1 0.164749205112457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP2K ENSG00000138756 CDS Human protein_coding chr4:79766114 chr4:79766107 nonsynonymous SNV 0.986 0 14 hm5C_associated_SNPs_27990 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr4:79766078-79766114
64251 chr17 78349667 78349667 1 + A T LUAD 78349659 + 78349639 78349679 41 CCCACAATGCAAGCCTCCACCCCACGCCAGAGGTGAGTAAC CCCACAATGCAAGCCTCCACCCCACGCCTGAGGTGAGTAAC < 41bp 1 0.0240974254442913 1 0.194209218025208 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78349659 chr17:78349667 synonymous SNV . 0 29 hm5C_associated_SNPs_27992 0 0 8 BUD13 POSTAR2 ENCODE chr17:78349639-78349667
64251 chr12 132262716 132262716 1 + G C LUAD 132262709 + 132262689 132262729 41 CTTCGAGCAAAAGCAAAGATCCACCGAGAGAAGAAGAGAAA CTTCGAGCAAAAGCAAAGATCCACCGACAGAAGAAGAGAAA < 41bp 1 0.0829486809129284 1 0.111761778593063 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132262709 chr12:132262716 nonsynonymous SNV 0.901 4 28 hm5C_associated_SNPs_27993 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:132262700-132262720
64251 chr1 93998552 93998552 1 + G A LUAD 93998568 + 93998548 93998588 41 GAACGCAAAGTTATTCCCATCATTTCAAAATGTTTGGAAGG GAACACAAAGTTATTCCCATCATTTCAAAATGTTTGGAAGG < 41bp 1 0.0472950721479178 1 0.128091394901276 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:93998568 chr1:93998552 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_27994 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:93998517-93998553
64251 chr19 36034719 36034719 1 - C A LUAD 36034699 - 36034679 36034719 41 GTGTAGGCAAGGATGCCAGCCATGGGCCCCTTGGCTGCTGC TTGTAGGCAAGGATGCCAGCCATGGGCCCCTTGGCTGCTGC < 41bp 1 0.429268370590921 1 0.592822909355164 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36034699 chr19:36034719 nonsynonymous SNV 0.918 4 1 hm5C_associated_SNPs_27995 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36034689-36034728
64251 chr16 68109324 68109324 1 + G T LUAD 68109341 + 68109321 68109361 41 CAGGCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAG CAGTCTCTCAGCCAAGACTTCAGAGCAGACAGGGGAGCCAG < 41bp 1 0.645734697719312 1 0.559820234775543 experiment 0.708530604561377 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68109341 chr16:68109324 nonsynonymous SNV 0.004 0 4 hm5C_associated_SNPs_27996 0 0 1 BUD13 POSTAR2 ENCODE chr16:68109233-68109333
64251 chr16 30740307 30740307 1 + G T LUAD 30740289 + 30740269 30740309 41 TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAAAGCGGAA TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAAAGCGTAA < 41bp 1 0.0639513153209551 1 0.123671770095825 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30740289 chr16:30740307 synonymous SNV . 0 39 hm5C_associated_SNPs_27997 0 0 18 DGCR8 POSTAR2 GSE39086,GSM955513 chr16:30740300-30740320
64251 chr16 77232114 77232114 1 + G C LUAD 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGAAAGAGGAGGACCCGCTCTTCATTCGTTACCCA < 41bp 1 0.251763161747812 1 0.072078138589859 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232114 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_28002 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:77232100-77232120
64251 chr10 7745435 7745435 1 + T G LUAD 7745438 + 7745418 7745458 41 TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA TTTCATCTGCTTCTTTCGTTCTGAAGTATCAGGCTTCGAAA < 41bp 1 0.700421580279831 1 0.668948948383331 experiment 0.599156839440338 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7745438 chr10:7745435 nonsynonymous SNV 0.063 1 18 hm5C_associated_SNPs_28003 0 0 2 DDX3X POSTAR2 ENCODE chr10:7745420-7745472
64251 chr4 4864782 4864782 1 + C A LUAD 4864793 + 4864773 4864813 41 ACGGTGCCTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTG ACGGTGCCTATGGCCCCTTCCAGCGCGCCGCGCTGCCTGTG < 41bp 1 0.792283473739695 1 0.805925786495209 experiment 0.41543305252061 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864793 chr4:4864782 nonsynonymous SNV 0.989 4 10 hm5C_associated_SNPs_28004 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:4864768-4864795
64251 chr2 32724733 32724733 1 + T C LUAD 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAGAATCGGCTACATTTTTAGTGCACC < 41bp 1 0.0917881011517159 1 0.696305990219116 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724733 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_28005 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr10 70726924 70726924 1 + A T LUAD 70726923 + 70726903 70726943 41 TGGATATGGGATTTGCTGATCAAGTGGAAGAGATTTTAAGT TGGATATGGGATTTGCTGATCTAGTGGAAGAGATTTTAAGT < 41bp 1 0.470719223825682 1 0.330955415964127 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70726923 chr10:70726924 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_28006 0 0 27 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70726810-70726955
64251 chr1 36358858 36358858 1 + T C LUAD 36358839 + 36358819 36358859 41 CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCATG CTGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGCCACG < 41bp 1 0.298560951445638 1 0.660102427005768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36358839 chr1:36358858 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_28007 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:36358821-36358859
64251 chr17 78359421 78359421 1 + G T LUAD 78359407 + 78359387 78359427 41 ATGGAACAAACTGAGGAGATCGCTTGAGACGAACGGTTAGT ATGGAACAAACTGAGGAGATCGCTTGAGACGAACTGTTAGT < 41bp 1 0.043431755148163 1 0.388231158256531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78359407 chr17:78359421 nonsynonymous SNV 0.010 4 35 hm5C_associated_SNPs_28010 0 0 2 BUD13 POSTAR2 ENCODE chr17:78359380-78359422
64251 chr13 76393660 76393660 1 + G T LUAD 76393641 + 76393621 76393661 41 TGAGAAGTCTAAGAGAAGCTCTAAGACGTTTAAGGAAATGC TGAGAAGTCTAAGAGAAGCTCTAAGACGTTTAAGGAAATTC < 41bp 1 0.302049235699495 1 0.236374050378799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76393641 chr13:76393660 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_28017 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr13:76393641-76393662
64251 chr16 90028216 90028216 1 + G T LUAD 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACTACCTGGCTGTGATCCCTGCACGCGTTGTACACAA < 41bp 1 0.379676025534423 1 0.245810121297836 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028216 nonsynonymous SNV 0.959 4 7 hm5C_associated_SNPs_28019 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr16 90028216 90028216 1 + G T LUAD 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACTACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC < 41bp 1 0.106294830335336 1 0.252038300037384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028216 nonsynonymous SNV 0.959 4 6 hm5C_associated_SNPs_28020 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr5 145849210 145849210 1 + A G LUAD 145849206 + 145849186 145849226 41 AGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAAAA AGCTGGAGCAACAGCAGTTTCTGAGTGGACTGAATATAAAA < 41bp 1 0.670761083244902 1 0.491458207368851 experiment 0.658477833510196 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145849206 chr5:145849210 synonymous SNV . 0 25 hm5C_associated_SNPs_28022 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:145849180-145849220
64251 chr14 102455115 102455115 1 + G C LUAD 102455097 + 102455077 102455117 41 TGAGAGCTTGGACGCAGGTTCTTCTTGGACAAGCTGAAGAT TGAGAGCTTGGACGCAGGTTCTTCTTGGACAAGCTGAACAT < 41bp 1 0.0799498467597432 1 0.0739034712314606 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102455097 chr14:102455115 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_28027 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102455077-102455179
64251 chr20 32659995 32659995 1 + G A LUAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCAGATGTGAAGACCATCTTCTCTAAGTATGGCCGTGT < 41bp 1 0.128039772364721 1 0.0645228624343872 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32659995 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_28028 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chr20 32659989 32659989 1 + G C LUAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCACATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT < 41bp 1 0.15518016625253 1 0.075805276632309 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32659989 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_28029 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chrX 152959710 152959710 1 + C G LUAD 152959718 + 152959698 152959738 41 CATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG CATCGATCTCTCGATGGTGACTGATGTGAGTGGGGTGGGGG < 41bp 1 0.371403044367822 1 0.121910601854324 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959718 chrX:152959710 synonymous SNV . 0 13 hm5C_associated_SNPs_28030 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chr7 129093097 129093097 1 + G T LUAD 129093106 + 129093086 129093126 41 ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC ATTCAGAGGTCTATGTGCTACACTGGTCCAGGTACAACTGC < 41bp 1 0.543120591228141 1 0.100315481424332 experiment 0.913758817543719 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093106 chr7:129093097 nonsynonymous SNV 0.996 4 12 hm5C_associated_SNPs_28031 0 0 3 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr6 7572226 7572226 1 + G T LUAD 7572244 + 7572224 7572264 41 AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC AGTATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC < 41bp 1 0.043953698249716 1 0.110135197639465 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572244 chr6:7572226 nonsynonymous SNV 0.334 4 3 hm5C_associated_SNPs_28032 0 0 2 DGCR8 POSTAR2 ENCODE chr6:7572207-7572249
64251 chr6 139498103 139498103 1 + G T LUAD 139498084 + 139498064 139498104 41 TCTGTTTCCCCCAGGCCCGCCTGAACTGTAAGCACTGTGGG TCTGTTTCCCCCAGGCCCGCCTGAACTGTAAGCACTGTGTG < 41bp 1 0.55467169452325 1 0.162654310464859 experiment 0.890656610953501 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139498084 chr6:139498103 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_28035 0 0 8 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr6:139498086-139498107
64251 chr22 39125575 39125575 1 + G T LUAD 39125568 + 39125548 39125588 41 ACGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGT ACGAAACGAGACGAGGGGGGCCCGTCTTGTGGGCCAGCAGT < 41bp 1 0.124928522157304 1 0.214777648448944 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125568 chr22:39125575 nonsynonymous SNV 0.008 1 28 hm5C_associated_SNPs_28036 0 0 2 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125575 39125575 1 + G T LUAD 39125569 + 39125549 39125589 41 CGAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTA CGAAACGAGACGAGGGGGGCCCGTCTTGTGGGCCAGCAGTA < 41bp 1 0.0454170747276272 1 0.186276614665985 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125569 chr22:39125575 nonsynonymous SNV 0.008 1 27 hm5C_associated_SNPs_28037 0 0 2 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr22 39125575 39125575 1 + G T LUAD 39125570 + 39125550 39125590 41 GAAACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAG GAAACGAGACGAGGGGGGCCCGTCTTGTGGGCCAGCAGTAG < 41bp 1 0.143733783414318 1 0.347305238246918 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125570 chr22:39125575 nonsynonymous SNV 0.008 1 26 hm5C_associated_SNPs_28038 0 0 2 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr11 33358645 33358645 1 + G T LUAD 33358660 + 33358640 33358680 41 CTCAAGGTTTGCCAGGAGAACAGTTGTTAAATGTGGGTACT CTCAATGTTTGCCAGGAGAACAGTTGTTAAATGTGGGTACT < 41bp 1 0.188070749936169 1 0.169177681207657 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33358660 chr11:33358645 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_28039 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr11:33358625-33358645
64251 chr10 17276749 17276749 1 + C T LUAD 17276740 + 17276720 17276760 41 GGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT GGAACAATGACGCCCTGCGCCAGGCAAAGTAGGAGTCCACT < 41bp 1 0.406718208694829 1 0.680987179279327 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276740 chr10:17276749 stopgain 1.000 1 30 hm5C_associated_SNPs_28041 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr10 17276749 17276749 1 + C T LUAD 17276757 + 17276737 17276777 41 CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT CGCCAGGCAAAGTAGGAGTCCACTGAGTACCGGAGACAGGT < 41bp 1 0.281348155503258 1 0.108192771673203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276757 chr10:17276749 stopgain 1.000 1 13 hm5C_associated_SNPs_28042 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr16 74339560 74339560 1 + G A LUAD 74339544 + 74339524 74339564 41 GGGCAGGAGAAAGAAGAGAGCAAAAAGGATAGGAAAGAGGA GGGCAGGAGAAAGAAGAGAGCAAAAAGGATAGGAAAAAGGA < 41bp 1 0.568691854576933 1 0.512498080730438 experiment 0.862616290846133 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339544 chr16:74339560 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_28043 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:74339540-74339560
64251 chr16 74339560 74339560 1 + G A LUAD 74339565 + 74339545 74339585 41 AAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAA AAAAAGGATAGGAAAAAGGACAAGGAGAAAGATAAAGATAA < 41bp 1 0.536744668747612 1 0.397433698177338 experiment 0.926510662504775 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339565 chr16:74339560 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_28044 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:74339540-74339560
64251 chr11 4156359 4156359 1 + G T LUAD 4156342 + 4156322 4156362 41 AAATTCCTGATGACCTGAAGCAACTTTATAAAACTGTGTGG AAATTCCTGATGACCTGAAGCAACTTTATAAAACTGTTTGG < 41bp 1 0.299138097495248 1 0.122512102127075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4156342 chr11:4156359 synonymous SNV . 0 38 hm5C_associated_SNPs_28045 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4156316-4156418
64251 chr14 102918939 102918939 1 + G T LUAD 102918952 + 102918932 102918972 41 TGCACTGGACCAGGCTGGACCTCTCCCAGCTAGGTACGGCC TGCACTGTACCAGGCTGGACCTCTCCCAGCTAGGTACGGCC < 41bp 1 0.0676863608839626 1 0.290285050868988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102918952 chr14:102918939 nonsynonymous SNV 0.996 4 8 hm5C_associated_SNPs_28046 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102918933-102918960
64251 chr19 48179129 48179129 1 + G A LUAD 48179146 + 48179126 48179166 41 CTGGATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAAGG CTGAATAATCCCGGGGAGGCCCAAAGTGCCTTCTATGAAGG < 41bp 1 0.143668345823289 1 0.657753050327301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BICRA ENSG00000063169 CDS Human protein_coding chr19:48179146 chr19:48179129 nonsynonymous SNV 0.995 2 4 hm5C_associated_SNPs_28048 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:48179129-48179130
64251 chr11 46747442 46747442 1 + G T LUAD 46747436 + 46747416 46747456 41 TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCA TCAAGTCACTGTAGCGATGACTCCACTCTCCGAAGGCTCCA < 41bp 1 0.724368159248523 1 0.962000131607056 experiment 0.551263681502954 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control F2 ENSG00000180210 CDS Human protein_coding chr11:46747436 chr11:46747442 nonsynonymous SNV 0.104 1 27 hm5C_associated_SNPs_28049 0 0 1 SND1 POSTAR2 ENCODE chr11:46747442-46747459
64251 chr2 128184758 128184758 1 + C A LUAD 128184754 + 128184734 128184774 41 CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGATGAGT CCCCTCCTGGGTGCTGACAGCGGCACACTGCATGGATGAGT < 41bp 1 0.750142072971757 1 0.599756121635437 experiment 0.499715854056486 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128184754 chr2:128184758 synonymous SNV . 0 25 hm5C_associated_SNPs_28050 0 0 2 PPIG POSTAR2 ENCODE chr2:128184752-128184787
64251 chr17 64785039 64785039 1 + G T LUAD 64785043 + 64785023 64785063 41 CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAA CATGCCTTCTTCCGGATGATCGACTGGGAAAAACTGGAGAA < 41bp 1 0.364704263854856 1 0.383940428495407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785043 chr17:64785039 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_28054 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr17 64785039 64785039 1 + G T LUAD 64785046 + 64785026 64785066 41 GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAG GCCTTCTTCCGGATGATCGACTGGGAAAAACTGGAGAACAG < 41bp 1 0.562413912411769 1 0.677237391471863 experiment 0.875172175176462 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785046 chr17:64785039 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_28055 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr1 118477140 118477140 1 + C T LUAD 118477159 + 118477139 118477179 41 GCCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAG GTCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAG < 41bp 1 0.149923715287321 1 0.0421774089336395 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WDR3 ENSG00000065183 CDS Human protein_coding chr1:118477159 chr1:118477140 synonymous SNV . 0 2 hm5C_associated_SNPs_28056 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:118477120-118477140
64251 chr16 4431769 4431769 1 + C T LUAD 4431752 + 4431732 4431772 41 GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGTAAC < 41bp 1 0.514576485162801 1 0.225149065256119 experiment 0.970847029674398 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431752 chr16:4431769 synonymous SNV . 0 38 hm5C_associated_SNPs_28057 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:4431758-4431782
64251 chr4 166254679 166254679 1 + G C LUAD 166254694 + 166254674 166254714 41 CATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTA CATGGCGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTA < 41bp 1 0.585163492368244 1 0.0655241906642914 experiment 0.829673015263513 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166254694 chr4:166254679 nonsynonymous SNV 0.997 3 6 hm5C_associated_SNPs_28058 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:166254666-166254697
64251 chr2 211465353 211465353 1 + A T LUAD 211465360 + 211465340 211465380 41 AGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTT AGTTGAGTCCATTTTGGCTACGGAAGACAGGCAGCTGTTTT < 41bp 1 0.544140546191612 1 0.73807966709137 experiment 0.911718907616776 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPS1 ENSG00000021826 CDS Human protein_coding chr2:211465360 chr2:211465353 nonsynonymous SNV 0.998 3 14 hm5C_associated_SNPs_28059 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:211465340-211465360
64251 chr5 176710798 176710798 1 + T C LUAD 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACCGAATCACTGATGCTGGTCCC < 41bp 1 0.0834039563393069 1 0.17665821313858 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710798 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_28061 0 0 5 LIN28A POSTAR2 GSE39873,GSM980594 chr5:176710780-176710800
64251 chr1 233514942 233514942 1 + G T LUAD 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTTGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.322297398302069 1 0.0345241129398346 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514942 synonymous SNV . 0 19 hm5C_associated_SNPs_28062 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr17 59161843 59161843 1 + C T LUAD 59161840 + 59161820 59161860 41 CATTGCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCAT CATTGCAGGATCCAGCCAGTCCGTTCTGACCCCGTCAGCAT < 41bp 1 0.143253932400608 1 0.0279829502105713 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59161840 chr17:59161843 synonymous SNV . 0 24 hm5C_associated_SNPs_28065 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:59161820-59161850
64251 chr15 69737240 69737240 1 + G A LUAD 69737220 + 69737200 69737240 41 CAGATGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTG CAGATGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTA < 41bp 1 0.194793578410509 1 0.060178279876709 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737220 chr15:69737240 nonsynonymous SNV 0.995 1 41 hm5C_associated_SNPs_28066 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:69737240-69737272
64251 chr15 69737240 69737240 1 + G A LUAD 69737224 + 69737204 69737244 41 TGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTGAAAC TGGGTAGATCATAAGCCCGCCTCTAACATGCAAACTAAAAC < 41bp 1 0.237444267369587 1 0.24949848651886 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69737224 chr15:69737240 nonsynonymous SNV 0.995 1 37 hm5C_associated_SNPs_28067 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:69737240-69737272
64251 chr6 7231533 7231533 1 + C T LUAD 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGAGCTGCCCCCGCTGGCCTCTATTGCCCAGATCATCTC < 41bp 1 0.418944196284736 1 0.918304920196533 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231533 synonymous SNV . 0 24 hm5C_associated_SNPs_28068 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:7231491-7231541
64251 chr19 55898026 55898026 1 + G A LUAD 55898006 + 55897986 55898026 41 ATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCGACGG ATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCGACGA < 41bp 1 0.658465003705344 1 0.578602850437164 experiment 0.683069992589313 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898006 chr19:55898026 nonsynonymous SNV 0.939 2 41 hm5C_associated_SNPs_28070 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr19 55898026 55898026 1 + G A LUAD 55898017 + 55897997 55898037 41 GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCG GACTGTGGGCGTGGAGCCGGCAGCCGACGACAAAGGTGTCG < 41bp 1 0.510263303365646 1 0.46925213932991 experiment 0.979473393268709 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898017 chr19:55898026 nonsynonymous SNV 0.939 2 30 hm5C_associated_SNPs_28071 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr2 182786958 182786958 1 + C T LUAD 182786940 + 182786920 182786960 41 GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTTTG < 41bp 1 0.474335255908392 1 0.124787747859955 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786940 chr2:182786958 nonsynonymous SNV 0.999 1 39 hm5C_associated_SNPs_28072 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:182786937-182786990
64251 chr22 29695793 29695793 1 + A C LUAD 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGCCCCCTGGACCTTTGATGGAACCGATGGGAG < 41bp 1 0.468496182556478 1 0.308031558990479 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695793 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_28073 0 0 44 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:29695775-29695796
64251 chr6 35438059 35438059 1 + C G LUAD 35438048 + 35438028 35438068 41 TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAAC TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTGACACACAAC < 41bp 1 0.0281473076234127 1 0.120145678520203 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438048 chr6:35438059 synonymous SNV . 0 32 hm5C_associated_SNPs_28074 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:35438002-35438069
64251 chr12 53412608 53412608 1 + G A LUAD 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATAACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA < 41bp 1 0.337633876094525 1 0.0738425254821777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412608 nonsynonymous SNV 0.538 3 5 hm5C_associated_SNPs_28078 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr12 53412608 53412608 1 + G A LUAD 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATAACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC < 41bp 1 0.0493862744958587 1 0.0510726869106293 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412608 nonsynonymous SNV 0.538 3 3 hm5C_associated_SNPs_28079 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:53412600-53412620
64251 chr5 132203218 132203218 1 + G C LUAD 132203205 + 132203185 132203225 41 GTAGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTT GTAGTGTTTTATCTTATCTACACATGGGGGACTCAAGAGTT < 41bp 1 0.319975535581428 1 0.172575771808624 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203205 chr5:132203218 nonsynonymous SNV 0.352 0 34 hm5C_associated_SNPs_28080 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203218 132203218 1 + G C LUAD 132203207 + 132203187 132203227 41 AGTGTTTTATCTTATCTACACATGGGGGACTGAAGAGTTCG AGTGTTTTATCTTATCTACACATGGGGGACTCAAGAGTTCG < 41bp 1 0.442620118200393 1 0.354389280080795 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203207 chr5:132203218 nonsynonymous SNV 0.352 0 32 hm5C_associated_SNPs_28081 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr5 132203218 132203218 1 + G C LUAD 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTCAAGAGTTCGAGAGATCCA < 41bp 1 0.59745074333858 1 0.702571153640747 experiment 0.805098513322841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203218 nonsynonymous SNV 0.352 0 23 hm5C_associated_SNPs_28082 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr8 26223870 26223870 1 + G A LUAD 26223855 + 26223835 26223875 41 ATGAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAAT ATGAATACCTCAGAAGTAAACTCTGTTCACTGTATAAAAAT < 41bp 1 0.314408806880272 1 0.118753254413605 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223855 chr8:26223870 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_28083 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223857 + 26223837 26223877 41 GAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGA GAATACCTCAGAAGTAAACTCTGTTCACTGTATAAAAATGA < 41bp 1 0.0823041615584025 1 0.172660022974014 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223857 chr8:26223870 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_28084 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223862 + 26223842 26223882 41 CCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCA CCTCAGAAGTAAACTCTGTTCACTGTATAAAAATGACTGCA < 41bp 1 0.303793471490189 1 0.314831107854843 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223862 chr8:26223870 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_28085 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223864 + 26223844 26223884 41 TCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCATA TCAGAAGTAAACTCTGTTCACTGTATAAAAATGACTGCATA < 41bp 1 0.513517263600509 1 0.273767560720444 experiment 0.972965472798983 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223864 chr8:26223870 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_28086 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223878 + 26223858 26223898 41 TGTTCACTGTATGAAAATGACTGCATATTTGACAAATTTGA TGTTCACTGTATAAAAATGACTGCATATTTGACAAATTTGA < 41bp 1 0.427514693417673 1 0.0974319577217102 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223878 chr8:26223870 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_28087 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223881 + 26223861 26223901 41 TCACTGTATGAAAATGACTGCATATTTGACAAATTTGAATG TCACTGTATAAAAATGACTGCATATTTGACAAATTTGAATG < 41bp 1 0.0634634630898166 1 0.0999782681465149 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223881 chr8:26223870 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_28088 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223870 26223870 1 + G A LUAD 26223890 + 26223870 26223910 41 GAAAATGACTGCATATTTGACAAATTTGAATGTTGTTGGAA AAAAATGACTGCATATTTGACAAATTTGAATGTTGTTGGAA < 41bp 1 0.203285962758063 1 0.277453482151031 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223890 chr8:26223870 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_28089 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr1 43917151 43917151 1 - G A LUAD 43917159 - 43917139 43917179 41 AGCCCAGCAGCCCCGGAGAGCTGAATTTCCCCTATCTGTTT AGCCCAGCAGCCCCGGAGAGCTGAATTTTCCCTATCTGTTT < 41bp 1 0.669821772007015 1 0.131584167480469 experiment 0.66035645598597 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HYI ENSG00000178922 CDS Human protein_coding chr1:43917159 chr1:43917151 synonymous SNV . 0 29 hm5C_associated_SNPs_28090 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:43917132-43917155
64251 chr19 803570 803570 1 + G A LUAD 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCGGGGATCTAACGAGCTTTTCTCTACTT < 41bp 1 0.273738991971413 1 0.198864221572876 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803570 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_28091 0 0 31 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr1 41215346 41215346 1 + C T LUAD 41215344 + 41215324 41215364 41 TTCACACAGAAGATAACAAGCGCCGGACTCTACAGGTATTA TTCACACAGAAGATAACAAGCGTCGGACTCTACAGGTATTA < 41bp 1 0.348983843195347 1 0.34994250535965 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFYC ENSG00000066136 CDS Human protein_coding chr1:41215344 chr1:41215346 synonymous SNV . 0 23 hm5C_associated_SNPs_28093 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:41215255-41215374
64251 chr4 184205516 184205516 1 + A T LUAD 184205512 + 184205492 184205532 41 AGTGCGCTCACAGACCTTTTCTCCAGGAGAGCGGAACCAGT AGTGCGCTCACAGACCTTTTCTCCTGGAGAGCGGAACCAGT < 41bp 1 0.50267966048297 1 0.241444826126099 experiment 0.99464067903406 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184205512 chr4:184205516 synonymous SNV . 0 25 hm5C_associated_SNPs_28094 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:184205494-184205525
64251 chr1 242042436 242042436 1 + C A LUAD 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTCAGAAGAAAGAGCGATTCCCCCACCTCTTTGCC < 41bp 1 0.167185636128156 1 0.137920588254929 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042436 synonymous SNV . 0 10 hm5C_associated_SNPs_28095 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:242042419-242042458
64251 chr1 214820057 214820057 1 + G A LUAD 214820060 + 214820040 214820080 41 TGACCCAAAGTCTGAGAGGTCTGGAATTAGATGTTGTTACT TGACCCAAAGTCTGAGAAGTCTGGAATTAGATGTTGTTACT < 41bp 1 0.728961879779792 1 0.635252356529236 experiment 0.542076240440416 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214820060 chr1:214820057 nonsynonymous SNV 0.097 0 18 hm5C_associated_SNPs_28096 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:214820017-214820080
64251 chr16 53504351 53504351 1 + G T LUAD 53504331 + 53504311 53504351 41 TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGT < 41bp 1 0.0967030597953636 1 0.161844432353973 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504331 chr16:53504351 nonsynonymous SNV 0.981 4 41 hm5C_associated_SNPs_28097 0 0 2 DDX24 POSTAR2 ENCODE chr16:53504281-53504363
64251 chr7 150066868 150066868 1 + G A LUAD 150066854 + 150066834 150066874 41 TCTCTAACACCTGGGGGCTACCGGAGTGTGGGCCGAAGCAG TCTCTAACACCTGGGGGCTACCGGAGTGTGGGCCAAAGCAG < 41bp 1 0.795681468315119 1 0.53280782699585 experiment 0.408637063369761 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150066854 chr7:150066868 nonsynonymous SNV 0.996 1 35 hm5C_associated_SNPs_28098 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150066841-150066869
64251 chr7 44802527 44802527 1 + G T LUAD 44802539 + 44802519 44802559 41 GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT GTCCGCTCTGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT < 41bp 1 0.0251221003891486 1 0.0317598581314087 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802539 chr7:44802527 synonymous SNV . 0 9 hm5C_associated_SNPs_28099 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44802519-44802543
64251 chr10 89474571 89474571 1 + C T LUAD 89474562 + 89474542 89474582 41 TCCTGAGCGTGTGCTTAAAACCAATTTGTCCACAGTGAGTG TCCTGAGCGTGTGCTTAAAACCAATTTGTTCACAGTGAGTG < 41bp 1 0.216065792301936 1 0.0824171900749207 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89474562 chr10:89474571 nonsynonymous SNV 0.995 1 30 hm5C_associated_SNPs_28101 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:89474554-89474580
64251 chr17 76399740 76399740 1 + G T LUAD 76399746 + 76399726 76399766 41 ATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGAC ATGCTGCATGCCCATACCTTCCACAGCAACTCTCTTTTGAC < 41bp 1 0.347680839174833 1 0.0599022209644318 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGS1 ENSG00000087157 CDS Human protein_coding chr17:76399746 chr17:76399740 nonsynonymous SNV 0.990 1 15 hm5C_associated_SNPs_28118 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:76399723-76399757
64251 chrX 40457953 40457953 1 + T C LUAD 40457957 + 40457937 40457977 41 ACCTGCTCTTTCTTTCTGAACTGCAAGTGCTACATGATATT ACCTGCTCTTTCTTTCCGAACTGCAAGTGCTACATGATATT < 41bp 1 0.633650022219844 1 0.045349508523941 experiment 0.732699955560312 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40457957 chrX:40457953 synonymous SNV . 0 17 hm5C_associated_SNPs_28121 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:40457945-40457970
64251 chr7 141255319 141255319 1 + G T LUAD 141255330 + 141255310 141255350 41 CTACAGCTGGGCTCTGCCTGCTGACCTGGGGAGGCCATTGG CTACAGCTGTGCTCTGCCTGCTGACCTGGGGAGGCCATTGG < 41bp 1 0.4471746514373 1 0.218439489603043 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141255330 chr7:141255319 nonsynonymous SNV 0.999 2 10 hm5C_associated_SNPs_28122 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:141255300-141255320
64251 chr11 12281424 12281424 1 + C T LUAD 12281442 + 12281422 12281462 41 CACCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT CATCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT < 41bp 1 0.664579960750379 1 0.238115787506104 experiment 0.670840078499242 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12281442 chr11:12281424 nonsynonymous SNV 0.073 0 3 hm5C_associated_SNPs_28131 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:12281414-12281444
64251 chr11 62554750 62554750 1 + G T LUAD 62554734 + 62554714 62554754 41 CCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGT CCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCTCTGT < 41bp 1 0.181865698806329 1 0.0881326496601105 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554734 chr11:62554750 synonymous SNV . 0 37 hm5C_associated_SNPs_28132 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:62554716-62554752
64251 chr11 62554750 62554750 1 + G T LUAD 62554736 + 62554716 62554756 41 GCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGTAC GCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCTCTGTAC < 41bp 1 0.219053636810131 1 0.269580125808716 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554736 chr11:62554750 synonymous SNV . 0 35 hm5C_associated_SNPs_28133 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:62554716-62554752
64251 chr14 77580506 77580506 1 + G A LUAD 77580491 + 77580471 77580511 41 AGGAGTTGATTCGTCAGAATCAGGCAACTCAGGTAGAACTA AGGAGTTGATTCGTCAGAATCAGGCAACTCAGGTAAAACTA < 41bp 1 0.694590107321043 1 0.894917368888855 experiment 0.610819785357915 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIPC ENSG00000198894 CDS Human protein_coding chr14:77580491 chr14:77580506 nonsynonymous SNV 0.993 3 36 hm5C_associated_SNPs_28134 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:77580471-77580527
64251 chr3 183899749 183899749 1 + G T LUAD 183899729 + 183899709 183899749 41 AACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAG AACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAT < 41bp 1 0.0273679185188173 1 0.0301083922386169 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899729 chr3:183899749 nonsynonymous SNV 0.998 2 41 hm5C_associated_SNPs_28135 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899749 183899749 1 + G T LUAD 183899730 + 183899710 183899750 41 ACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGT ACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTATT < 41bp 1 0.292008363864929 1 0.0218141973018646 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899730 chr3:183899749 nonsynonymous SNV 0.998 2 40 hm5C_associated_SNPs_28136 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899749 183899749 1 + G T LUAD 183899733 + 183899713 183899753 41 AAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGTGCG AAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTATTGCG < 41bp 1 0.60327947903638 1 0.738890528678894 experiment 0.793441041927241 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899733 chr3:183899749 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_28137 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr11 12281439 12281439 1 + C T LUAD 12281442 + 12281422 12281462 41 CACCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT CACCCTGGAAGGCAGCCTCCCAGGTATCTCCACCTCCTTCT < 41bp 1 0.72330257708591 1 0.0885542929172516 experiment 0.553394845828181 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12281442 chr11:12281439 nonsynonymous SNV 0.995 2 18 hm5C_associated_SNPs_28138 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:12281414-12281444
64251 chr1 237052596 237052596 1 + G C LUAD 237052594 + 237052574 237052614 41 GGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAG GGCAGCTCCGGGGCAAGTACCCCAATCGAGGCTTTCCCAAG < 41bp 1 0.498407139589224 1 0.804300606250763 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 CDS Human protein_coding chr1:237052594 chr1:237052596 synonymous SNV . 0 23 hm5C_associated_SNPs_28139 0 0 5 FXR1 POSTAR2 ENCODE chr1:237052500-237052605
64251 chr10 73122269 73122269 1 + G T LUAD 73122270 + 73122250 73122290 41 CTAAGATTGTGCCCAGGGAGCTGGCTGAGGCCACGGGAGTG CTAAGATTGTGCCCAGGGATCTGGCTGAGGCCACGGGAGTG < 41bp 1 0.750129562175011 1 0.685718476772308 experiment 0.499740875649978 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73122270 chr10:73122269 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_28140 0 0 4 TIA1 POSTAR2 ENCODE chr10:73122259-73122304
64251 chr11 65271249 65271249 1 + G T LUAD 65271236 + 65271216 65271256 41 CACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACG CACTCTTTAATGGACCAGATCAGGATTTGAGCGTAAGAACG < 41bp 1 0.713618386019955 1 0.692526578903198 experiment 0.572763227960091 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271236 chr11:65271249 . . 0 34 hm5C_associated_SNPs_28141 0 0 85 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr11 65271249 65271249 1 + G T LUAD 65271247 + 65271227 65271267 41 GGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT GGACCAGATCAGGATTTGAGCGTAAGAACGAATGTAACTTT < 41bp 1 0.529195790588614 1 0.216034471988678 experiment 0.941608418822773 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271247 chr11:65271249 . . 0 23 hm5C_associated_SNPs_28142 0 0 85 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr11 65271249 65271249 1 + G T LUAD 65271255 + 65271235 65271275 41 TCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGG TCAGGATTTGAGCGTAAGAACGAATGTAACTTTAAGGCAGG < 41bp 1 0.382150906820627 1 0.323323369026184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271255 chr11:65271249 . . 0 15 hm5C_associated_SNPs_28143 0 0 85 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr1 38171195 38171195 1 + G A LUAD 38171209 + 38171189 38171229 41 CTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGG CTTGCTAACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGG < 41bp 1 0.136854820205044 1 0.041256308555603 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38171209 chr1:38171195 nonsynonymous SNV 0.981 1 7 hm5C_associated_SNPs_28144 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:38171174-38171195
64251 chr6 32134872 32134872 1 + G T LUAD 32134883 + 32134863 32134903 41 GACGTGGATGAATGTAGGACCAGCATCACCCTCTGCTCGCA GACGTGGATTAATGTAGGACCAGCATCACCCTCTGCTCGCA < 41bp 1 0.468615056884302 1 0.464891076087952 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134883 chr6:32134872 stopgain 1.000 0 10 hm5C_associated_SNPs_28145 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr6:32134867-32134888
64251 chr5 176522652 176522652 1 + G T LUAD 176522651 + 176522631 176522671 41 TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGG TCCTCGGAGCAGTGAGGGGCCTCTCTCCTTCCCAGTCCTGG < 41bp 1 0.140220052649786 1 0.0631823241710663 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522651 chr5:176522652 synonymous SNV . 0 22 hm5C_associated_SNPs_28147 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr5 176522652 176522652 1 + G T LUAD 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCTCTCTCCTTCCCAGTCCTGGTCTCCT < 41bp 1 0.0457471915724374 1 0.237144321203232 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522652 synonymous SNV . 0 16 hm5C_associated_SNPs_28148 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr9 135942502 135942502 1 + G T LUAD 135942495 + 135942475 135942515 41 GTGGCTGAGAAGGTGGGTTGCCCTGTGGGTGATGCCGCCAG GTGGCTGAGAAGGTGGGTTGCCCTGTGTGTGATGCCGCCAG < 41bp 1 0.260447510888096 1 0.0371949076652527 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942495 chr9:135942502 nonsynonymous SNV 0.168 0 28 hm5C_associated_SNPs_28150 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942496 + 135942476 135942516 41 TGGCTGAGAAGGTGGGTTGCCCTGTGGGTGATGCCGCCAGG TGGCTGAGAAGGTGGGTTGCCCTGTGTGTGATGCCGCCAGG < 41bp 1 0.255886736392176 1 0.168404340744019 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942496 chr9:135942502 nonsynonymous SNV 0.168 0 27 hm5C_associated_SNPs_28151 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942497 + 135942477 135942517 41 GGCTGAGAAGGTGGGTTGCCCTGTGGGTGATGCCGCCAGGA GGCTGAGAAGGTGGGTTGCCCTGTGTGTGATGCCGCCAGGA < 41bp 1 0.528523046351836 1 0.459952920675278 experiment 0.942953907296328 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942497 chr9:135942502 nonsynonymous SNV 0.168 0 26 hm5C_associated_SNPs_28152 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942509 + 135942489 135942529 41 GGGTTGCCCTGTGGGTGATGCCGCCAGGATGGCCCAGTGTC GGGTTGCCCTGTGTGTGATGCCGCCAGGATGGCCCAGTGTC < 41bp 1 0.166006467684997 1 0.0943680107593536 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942509 chr9:135942502 nonsynonymous SNV 0.168 0 14 hm5C_associated_SNPs_28153 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942510 + 135942490 135942530 41 GGTTGCCCTGTGGGTGATGCCGCCAGGATGGCCCAGTGTCT GGTTGCCCTGTGTGTGATGCCGCCAGGATGGCCCAGTGTCT < 41bp 1 0.790088404721338 1 0.564921677112579 experiment 0.419823190557324 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942510 chr9:135942502 nonsynonymous SNV 0.168 0 13 hm5C_associated_SNPs_28154 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942512 + 135942492 135942532 41 TTGCCCTGTGGGTGATGCCGCCAGGATGGCCCAGTGTCTGA TTGCCCTGTGTGTGATGCCGCCAGGATGGCCCAGTGTCTGA < 41bp 1 0.441072252701721 1 0.319344103336334 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942512 chr9:135942502 nonsynonymous SNV 0.168 0 11 hm5C_associated_SNPs_28155 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942521 + 135942501 135942541 41 GGGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTG GTGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTG < 41bp 1 0.293204395914384 1 0.0599570274353027 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942521 chr9:135942502 nonsynonymous SNV 0.168 0 2 hm5C_associated_SNPs_28156 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr9 135942502 135942502 1 + G T LUAD 135942522 + 135942502 135942542 41 GGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTGA TGTGATGCCGCCAGGATGGCCCAGTGTCTGAAGGTTACTGA < 41bp 1 0.369445504304009 1 0.207078605890274 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942522 chr9:135942502 nonsynonymous SNV 0.168 0 1 hm5C_associated_SNPs_28157 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942502-135942525
64251 chr7 150768924 150768924 1 + G A LUAD 150768915 + 150768895 150768935 41 CTGCTGGTCTTTGAGGAGGCCTTCTTCTCGGTGAGGGCTCT CTGCTGGTCTTTGAGGAGGCCTTCTTCTCAGTGAGGGCTCT < 41bp 1 0.0777828567978536 1 0.0802178382873535 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150768915 chr7:150768924 synonymous SNV . 0 30 hm5C_associated_SNPs_28166 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:150768897-150768924
64251 chr19 17615394 17615394 1 + C A LUAD 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGAATCTGCTCGGGCGCCTTCGCCCT < 41bp 1 0.410804507916626 1 0.139986753463745 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615394 synonymous SNV . 0 18 hm5C_associated_SNPs_28167 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr17 17697997 17697997 1 + C G LUAD 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGCCTACACGGCAGTGTGCCGCTCGACAGCTTCTCCAAG < 41bp 1 0.0644976402476602 1 0.0124459266662598 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17697997 nonsynonymous SNV 0.125 4 18 hm5C_associated_SNPs_28168 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697983-17698008
64251 chr12 53700879 53700879 1 + G C LUAD 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTC < 41bp 1 0.570113780663025 1 0.374717950820923 experiment 0.85977243867395 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700879 nonsynonymous SNV 0.988 3 41 hm5C_associated_SNPs_28170 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:53700868-53700909
64251 chr2 235951006 235951006 1 + G T LUAD 235950995 + 235950975 235951015 41 TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTGTCCAGGCCC TGCAGCTGTGGGGGAAGCACCAGTTCGTTTTTTCCAGGCCC < 41bp 1 0.249516317127179 1 0.553862988948822 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950995 chr2:235951006 nonsynonymous SNV 0.600 3 32 hm5C_associated_SNPs_28171 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:235951000-235951029
64251 chr7 98564703 98564703 1 + A C LUAD 98564687 + 98564667 98564707 41 CCTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGATGAT CCTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGCTGAT < 41bp 1 0.0127895269665802 1 0.101994097232819 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98564687 chr7:98564703 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_28172 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98564686-98564775
64251 chr19 40884006 40884006 1 + G T LUAD 40884016 + 40883996 40884036 41 TTTCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG TTTCCTGAGGTACTGGGACTCCCCTTACAGCCATGACCTTG < 41bp 1 0.431312103948693 1 0.162058264017105 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884016 chr19:40884006 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_28173 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr19 40884006 40884006 1 + G T LUAD 40884018 + 40883998 40884038 41 TCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC TCCTGAGGTACTGGGACTCCCCTTACAGCCATGACCTTGAC < 41bp 1 0.230669762037123 1 0.213762879371643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884018 chr19:40884006 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_28174 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr5 122161790 122161790 1 + G T LUAD 122161793 + 122161773 122161813 41 GGCAGAAATGGGAAGATGCTCAAATTACTTTGCTCAAAAAA GGCAGAAATGGGAAGATTCTCAAATTACTTTGCTCAAAAAA < 41bp 1 0.507478930205525 1 0.508465051651001 experiment 0.985042139588951 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122161793 chr5:122161790 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_28175 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:122161744-122161854
64251 chr5 122161791 122161791 1 + C G LUAD 122161793 + 122161773 122161813 41 GGCAGAAATGGGAAGATGCTCAAATTACTTTGCTCAAAAAA GGCAGAAATGGGAAGATGGTCAAATTACTTTGCTCAAAAAA < 41bp 1 0.358482681819969 1 0.273212403059006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122161793 chr5:122161791 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_28176 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:122161744-122161854
64251 chr12 31236920 31236920 1 + G A LUAD 31236904 + 31236884 31236924 41 GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGACCTG < 41bp 1 0.686559643590155 1 0.480934500694275 experiment 0.626880712819691 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31236904 chr12:31236920 nonsynonymous SNV . 0 37 hm5C_associated_SNPs_28177 0 0 4 GRWD1 POSTAR2 ENCODE chr12:31236877-31236930
64251 chr2 85133174 85133174 1 + C G LUAD 85133155 + 85133135 85133175 41 TAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCA TAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCGA < 41bp 1 0.470467278251322 1 0.253531277179718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMSB10 ENSG00000034510 CDS Human protein_coding chr2:85133155 chr2:85133174 synonymous SNV . 0 40 hm5C_associated_SNPs_28178 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85133138-85133216
64251 chr6 30545863 30545863 1 + A G LUAD 30545872 + 30545852 30545892 41 GCAAAAAAAAAAGCGAGATACCCGAAAAGGCAGGCGGAAGA GCAAAAAAAAAGGCGAGATACCCGAAAAGGCAGGCGGAAGA < 41bp 1 0.511406488112374 1 0.370166510343552 experiment 0.977187023775252 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30545872 chr6:30545863 nonsynonymous SNV 0.999 1 12 hm5C_associated_SNPs_28180 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:30545860-30545880
64251 chr4 30725930 30725930 1 + G A LUAD 30725920 + 30725900 30725940 41 CACTGTGGAGGCTTCTAAGCCAAATGGACAGAGGTATGATA CACTGTGGAGGCTTCTAAGCCAAATGGACAAAGGTATGATA < 41bp 1 0.145525034938322 1 0.670602977275848 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725920 chr4:30725930 synonymous SNV . 0 31 hm5C_associated_SNPs_28182 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30725866-30725952
64251 chr8 145583767 145583767 1 + C T LUAD 145583775 + 145583755 145583795 41 TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTC TGCCCTTCTGGTTGCTTCAGCTGCTGCCTTCCAGGGTCTTC < 41bp 1 0.330827213599506 1 0.0618072748184204 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583775 chr8:145583767 synonymous SNV . 0 13 hm5C_associated_SNPs_28183 0 0 1 DDX55 POSTAR2 ENCODE chr8:145583725-145583788
64251 chr20 3804637 3804637 1 + G T LUAD 3804653 + 3804633 3804673 41 TTCCGCCTGGCAGCAGAGAACCCTTTCCAGGAGCCACGGAC TTCCTCCTGGCAGCAGAGAACCCTTTCCAGGAGCCACGGAC < 41bp 1 0.136791205661632 1 0.0564450621604919 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3804653 chr20:3804637 nonsynonymous SNV 0.606 0 5 hm5C_associated_SNPs_28190 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3804630-3804662
64251 chr7 138944042 138944042 1 + G T LUAD 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGATATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG < 41bp 1 0.452352415071035 1 0.50260978937149 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944042 nonsynonymous SNV 0.997 0 5 hm5C_associated_SNPs_28191 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr10 93695424 93695424 1 + C T LUAD 93695421 + 93695401 93695441 41 TTTGTTATTTCAGGCTAGATCGCCTTTTTATTTTACTGGAT TTTGTTATTTCAGGCTAGATCGCTTTTTTATTTTACTGGAT < 41bp 1 0.25018245083059 1 0.335076570510864 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93695421 chr10:93695424 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_28194 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:93695414-93695441
64251 chrX 128691359 128691359 1 + C A LUAD 128691345 + 128691325 128691365 41 GGGGACTGGATCAGAGAGCGCCGCTTTGAAATCCCTGATGA GGGGACTGGATCAGAGAGCGCCGCTTTGAAATCCATGATGA < 41bp 1 0.302005378584358 1 0.0591717958450317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128691345 chrX:128691359 nonsynonymous SNV 0.999 3 35 hm5C_associated_SNPs_28195 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:128691350-128691374
64251 chr7 75933446 75933446 1 + G T LUAD 75933438 + 75933418 75933458 41 AGTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAG AGTCACCTTCGAGTCGCGGGCCCAGCTTTGGGGCCCAGAAG < 41bp 1 0.248696803348536 1 0.170362800359726 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933438 chr7:75933446 nonsynonymous SNV 0.837 4 29 hm5C_associated_SNPs_28196 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933446 75933446 1 + G T LUAD 75933439 + 75933419 75933459 41 GTCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGC GTCACCTTCGAGTCGCGGGCCCAGCTTTGGGGCCCAGAAGC < 41bp 1 0.272305771677829 1 0.44756606221199 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933439 chr7:75933446 nonsynonymous SNV 0.837 4 28 hm5C_associated_SNPs_28197 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933446 75933446 1 + G T LUAD 75933440 + 75933420 75933460 41 TCACCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGCT TCACCTTCGAGTCGCGGGCCCAGCTTTGGGGCCCAGAAGCT < 41bp 1 0.511749000685976 1 0.202042430639267 experiment 0.976501998628049 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933440 chr7:75933446 nonsynonymous SNV 0.837 4 27 hm5C_associated_SNPs_28198 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933446 75933446 1 + G T LUAD 75933451 + 75933431 75933471 41 TCGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGA TCGCGGGCCCAGCTTTGGGGCCCAGAAGCTGCAAAATCCGA < 41bp 1 0.136640633018791 1 0.0410085618495941 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933451 chr7:75933446 nonsynonymous SNV 0.837 4 16 hm5C_associated_SNPs_28199 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933446 75933446 1 + G T LUAD 75933452 + 75933432 75933472 41 CGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGAT CGCGGGCCCAGCTTTGGGGCCCAGAAGCTGCAAAATCCGAT < 41bp 1 0.351946402462154 1 0.115142822265625 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933452 chr7:75933446 nonsynonymous SNV 0.837 4 15 hm5C_associated_SNPs_28200 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 75933446 75933446 1 + G T LUAD 75933453 + 75933433 75933473 41 GCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAAATCCGATG GCGGGCCCAGCTTTGGGGCCCAGAAGCTGCAAAATCCGATG < 41bp 1 0.755052726592767 1 0.423795968294144 experiment 0.489894546814466 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933453 chr7:75933446 nonsynonymous SNV 0.837 4 14 hm5C_associated_SNPs_28201 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr1 171535858 171535858 1 + G T LUAD 171535864 + 171535844 171535884 41 ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACAGATC ACAAGAGAAACCAATCCCAGCTACAGTCAGAAGCACAGATC < 41bp 1 0.445159074529015 1 0.551188766956329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171535864 chr1:171535858 nonsynonymous SNV 0.283 1 15 hm5C_associated_SNPs_28202 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171535819-171535894
64251 chr7 129096290 129096290 1 + G T LUAD 129096284 + 129096264 129096304 41 CCTGTTTCTTCCTTAGTTTACCCTCGGTGGATTTGAGCATC CCTGTTTCTTCCTTAGTTTACCCTCGTTGGATTTGAGCATC < 41bp 1 0.128652408149574 1 0.0369439125061035 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096284 chr7:129096290 nonsynonymous SNV 0.990 5 27 hm5C_associated_SNPs_28203 0 0 6 BUD13 POSTAR2 ENCODE chr7:129096282-129096370
64251 chr8 100182324 100182324 1 + C T LUAD 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTATCTGTACCAGTTATTCCCTCTTTCAGC < 41bp 1 0.0768963438340991 1 0.0688380897045135 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182324 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_28204 0 0 1 EIF3D POSTAR2 ENCODE chr8:100182316-100182392
64251 chr17 78081599 78081599 1 + C A LUAD 78081601 + 78081581 78081621 41 GTCTCCTGCATGTCCCAGCCCGGTGCGAACCTCTACGGGTC GTCTCCTGCATGTCCCAGACCGGTGCGAACCTCTACGGGTC < 41bp 1 0.522450283279313 1 0.527576923370361 experiment 0.955099433441374 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78081601 chr17:78081599 nonsynonymous SNV 0.019 1 19 hm5C_associated_SNPs_28205 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78081582-78081620
64251 chr17 4799509 4799509 1 + C T LUAD 4799505 + 4799485 4799525 41 CAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGA CAGTCCTTTGCCGACCTCCCCCACTGCCCTCTGCTGGTCGA < 41bp 1 0.138146715675961 1 0.055078387260437 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799505 chr17:4799509 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_28207 0 0 1 GRWD1 POSTAR2 ENCODE chr17:4799493-4799518
64251 chr17 4799509 4799509 1 + C T LUAD 4799508 + 4799488 4799528 41 TCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGACCT TCCTTTGCCGACCTCCCCCACTGCCCTCTGCTGGTCGACCT < 41bp 1 0.348751956886046 1 0.142670273780823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799508 chr17:4799509 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_28208 0 0 1 GRWD1 POSTAR2 ENCODE chr17:4799493-4799518
64251 chrX 48457770 48457770 1 + G T LUAD 48457763 + 48457743 48457783 41 CTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACC CTTTGAGGATGATCCTCGGGCCCTGGGTGCCCGTGGGCACC < 41bp 1 0.141088548628494 1 0.0524393320083618 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457763 chrX:48457770 synonymous SNV . 0 28 hm5C_associated_SNPs_28209 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457770 48457770 1 + G T LUAD 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGTGCCCGTGGGCACCGTCGTTCTG < 41bp 1 0.36102192554811 1 0.0421481132507324 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457770 synonymous SNV . 0 19 hm5C_associated_SNPs_28210 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457770 48457770 1 + G T LUAD 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGTGCCCGTGGGCACCGTCGTTCTGT < 41bp 1 0.38482027895827 1 0.409545600414276 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457770 synonymous SNV . 0 18 hm5C_associated_SNPs_28211 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457770 48457770 1 + G T LUAD 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGTGCCCGTGGGCACCGTCGTTCTGTC < 41bp 1 0.762462479464891 1 0.815609097480774 experiment 0.475075041070219 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457770 synonymous SNV . 0 17 hm5C_associated_SNPs_28212 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chr1 212619334 212619334 1 + A G LUAD 212619354 + 212619334 212619374 41 AAGGATGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT GAGGATGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT < 41bp 1 0.338733775854351 1 0.151954114437103 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NENF ENSG00000117691 CDS Human protein_coding chr1:212619354 chr1:212619334 nonsynonymous SNV 0.971 2 1 hm5C_associated_SNPs_28216 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212619229-212619482
64251 chr5 118877683 118877683 1 + G T LUAD 118877694 + 118877674 118877714 41 CTACGCCAAGCTCTGAAGGGCACACTACACTATTAATAAAA CTACGCCAATCTCTGAAGGGCACACTACACTATTAATAAAA < 41bp 1 0.153383024482577 1 0.0866518020629883 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118877694 chr5:118877683 nonsynonymous SNV 0.998 0 10 hm5C_associated_SNPs_28218 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118877651-118877684
64251 chr19 1913034 1913034 1 + G T LUAD 1913048 + 1913028 1913068 41 TCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC TCGCCCTACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC < 41bp 1 0.220648434598701 1 0.09965980052948 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913048 chr19:1913034 nonsynonymous SNV 0.045 3 7 hm5C_associated_SNPs_28221 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1913018-1913060
64251 chr15 73468860 73468860 1 + G T LUAD 73468840 + 73468820 73468860 41 GACTGGAAAACCAACTCCAACTGTGAAGTGGGTCAAAAATG GACTGGAAAACCAACTCCAACTGTGAAGTGGGTCAAAAATT < 41bp 1 0.115731641791341 1 0.205606609582901 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NEO1 ENSG00000067141 CDS Human protein_coding chr15:73468840 chr15:73468860 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_28222 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr15:73468778-73468896
64251 chr20 62521253 62521253 1 + A T LUAD 62521246 + 62521226 62521266 41 GAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG GAACGGCAGTGACAACCTCCCTTCCTCTGCGGGGAGTGGTG < 41bp 1 0.232890386959676 1 0.042797327041626 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521246 chr20:62521253 synonymous SNV 0.001 0 28 hm5C_associated_SNPs_28223 0 0 1 TBRG4 POSTAR2 ENCODE chr20:62521205-62521257
64251 chr2 33526644 33526644 1 + T A LUAD 33526650 + 33526630 33526670 41 CAGTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGA CAGTGCAGGAACACAGAGGGCTCTTTTCAATGTGTGTGTGA < 41bp 1 0.131324227337688 1 0.0397268831729889 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526650 chr2:33526644 synonymous SNV . 0 15 hm5C_associated_SNPs_28224 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:33526632-33526655
64251 chr2 33526644 33526644 1 + T A LUAD 33526652 + 33526632 33526672 41 GTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGACC GTGCAGGAACACAGAGGGCTCTTTTCAATGTGTGTGTGACC < 41bp 1 0.0400721717700368 1 0.0221834778785706 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526652 chr2:33526644 synonymous SNV . 0 13 hm5C_associated_SNPs_28225 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:33526632-33526655
64251 chr20 39793983 39793983 1 + C G LUAD 39793996 + 39793976 39794016 41 GCATCCTCTACCTGGAGGACCCTGTGAACCACGTGAGGACT GCATCCTGTACCTGGAGGACCCTGTGAACCACGTGAGGACT < 41bp 1 0.0750093555860111 1 0.128345340490341 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39793996 chr20:39793983 synonymous SNV . 0 8 hm5C_associated_SNPs_28227 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:39793976-39794001
64251 chr11 61511089 61511089 1 + G C LUAD 61511075 + 61511055 61511095 41 GCTGTCGCCAGTGGTTGCGGCGGCGGCCCGCCAGGACCCGG GCTGTCGCCAGTGGTTGCGGCGGCGGCCCGCCAGCACCCGG < 41bp 1 0.622931357152978 1 0.871140837669373 experiment 0.754137285694045 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61511075 chr11:61511089 nonsynonymous SNV 0.807 3 35 hm5C_associated_SNPs_28228 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:61511089-61511112
64251 chr17 38320071 38320071 1 + G A LUAD 38320054 + 38320034 38320074 41 ATCTCCAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGA ATCTCCAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTAAGA < 41bp 1 0.459782963659098 1 0.412460803985596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320054 chr17:38320071 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_28231 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320033-38320074
64251 chr17 38320071 38320071 1 + G A LUAD 38320059 + 38320039 38320079 41 CAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAA CAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTAAGAAGGAA < 41bp 1 0.38712856868194 1 0.094206690788269 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320059 chr17:38320071 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_28232 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320033-38320074
64251 chr17 38320071 38320071 1 + G A LUAD 38320064 + 38320044 38320084 41 GCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGC GCAGATGCTCCAGTGCTTGGCAGTCCTAAGAAGGAAGAGGC < 41bp 1 0.220215295486948 1 0.331507951021194 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320064 chr17:38320071 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_28233 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320033-38320074
64251 chr17 38320071 38320071 1 + G A LUAD 38320069 + 38320049 38320089 41 TGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGCAGCCT TGCTCCAGTGCTTGGCAGTCCTAAGAAGGAAGAGGCAGCCT < 41bp 1 0.483197702180804 1 0.254202038049698 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320069 chr17:38320071 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_28234 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320033-38320074
64251 chr6 7579538 7579538 1 + G C LUAD 7579519 + 7579499 7579539 41 ATTCCACAGCTGAAAAATACCAAGATCGAAGTTTTGGAAGA ATTCCACAGCTGAAAAATACCAAGATCGAAGTTTTGGAACA < 41bp 1 0.699508612583298 1 0.532020032405853 experiment 0.600982774833404 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579519 chr6:7579538 nonsynonymous SNV 1.000 5 40 hm5C_associated_SNPs_28235 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7579513-7579549
64251 chr3 99897182 99897182 1 + G T LUAD 99897188 + 99897168 99897208 41 AACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA AACTTCTGGAAATGTGAGTGCTCAGTCTGTGCAAGTCAGAA < 41bp 1 0.206263214075979 1 0.100678890943527 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897188 chr3:99897182 stopgain 0.997 1 15 hm5C_associated_SNPs_28237 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:99897148-99897198
64251 chr3 99897182 99897182 1 + G T LUAD 99897190 + 99897170 99897210 41 CTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATC CTTCTGGAAATGTGAGTGCTCAGTCTGTGCAAGTCAGAATC < 41bp 1 0.234602884200392 1 0.212208867073059 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897190 chr3:99897182 stopgain 0.997 1 13 hm5C_associated_SNPs_28238 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:99897148-99897198
64251 chr8 99168328 99168328 1 + C T LUAD 99168348 + 99168328 99168368 41 CTTTCTGCTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAG TTTTCTGCTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAG < 41bp 1 0.210479933286171 1 0.39539235830307 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POP1 ENSG00000104356 CDS Human protein_coding chr8:99168348 chr8:99168328 nonsynonymous SNV 0.996 4 1 hm5C_associated_SNPs_28241 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:99168303-99168334
64251 chr2 178378634 178378634 1 + C T LUAD 178378621 + 178378601 178378641 41 GAAGGGTGTTCAGTTTGCTCCTTTTTCTACATGCAGGTAAG GAAGGGTGTTCAGTTTGCTCCTTTTTCTACATGTAGGTAAG < 41bp 1 0.0302534778638718 1 0.102603435516357 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGPS ENSG00000018510 CDS Human protein_coding chr2:178378621 chr2:178378634 synonymous SNV . 0 34 hm5C_associated_SNPs_28242 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:178378607-178378802
64251 chr12 53673605 53673605 1 + C T LUAD 53673618 + 53673598 53673638 41 CCTGCCACATCACCCAGCTCCTCCTGACCCTCGGCTGTCCC CCTGCCATATCACCCAGCTCCTCCTGACCCTCGGCTGTCCC < 41bp 1 0.287850566457156 1 0.0792027711868286 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53673618 chr12:53673605 synonymous SNV . 0 8 hm5C_associated_SNPs_28243 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53673586-53673616
64251 chr3 169985720 169985720 1 + G T LUAD 169985728 + 169985708 169985748 41 ATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTG ATCTACCGTAGATGTGCACGCCGCTGGAGAAAGCTTTATTG < 41bp 1 0.400720388640066 1 0.367991238832474 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169985728 chr3:169985720 nonsynonymous SNV 0.977 5 13 hm5C_associated_SNPs_28246 0 0 1 UCHL5 POSTAR2 ENCODE chr3:169985702-169985745
64251 chr1 183086479 183086479 1 + A C LUAD 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGGATGGGTGGCGTGCGGAACCGAGAGATGGCTCTG < 41bp 1 0.728700067089477 1 0.793989658355713 experiment 0.542599865821046 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086479 nonsynonymous SNV 0.991 1 27 hm5C_associated_SNPs_28247 0 0 2 SND1 POSTAR2 ENCODE chr1:183086460-183086481
64251 chr1 39888078 39888078 1 + G A LUAD 39888071 + 39888051 39888091 41 TCAGAAAGAACAAGTGGATCCTCTTCAGATGAAATTGCAGC TCAGAAAGAACAAGTGGATCCTCTTCAAATGAAATTGCAGC < 41bp 1 0.0294362335129622 1 0.188499689102173 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39888071 chr1:39888078 synonymous SNV . 0 28 hm5C_associated_SNPs_28249 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39888058-39888134
64251 chr9 134354714 134354714 1 + G T LUAD 134354717 + 134354697 134354737 41 AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCT AGAACAACTTATGTCTGTAGCAAGGTGACGTGACCGTGCCT < 41bp 1 0.42601534658305 1 0.883167505264282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354717 chr9:134354714 stopgain 0.594 0 18 hm5C_associated_SNPs_28250 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr3 184106393 184106393 1 + C A LUAD 184106407 + 184106387 184106427 41 CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC CCCACCACCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC < 41bp 1 0.226098470986939 1 0.255955338478088 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184106407 chr3:184106393 nonsynonymous SNV 0.015 1 7 hm5C_associated_SNPs_28251 0 0 6 BUD13 POSTAR2 ENCODE chr3:184106371-184106476
64251 chr12 53663153 53663153 1 + G A LUAD 53663151 + 53663131 53663171 41 TGCTCCCCAGGACTATGAGGCCGTGGCTCGGGGCAGCTTTT TGCTCCCCAGGACTATGAGGCCATGGCTCGGGGCAGCTTTT < 41bp 1 0.0982589299117661 1 0.184565782546997 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663151 chr12:53663153 nonsynonymous SNV 0.429 2 23 hm5C_associated_SNPs_28252 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:53663140-53663160
64251 chr1 27089625 27089625 1 + G C LUAD 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACCCCT < 41bp 1 0.658961638981283 1 0.926283061504364 experiment 0.682076722037433 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089625 nonsynonymous SNV 0.857 1 38 hm5C_associated_SNPs_28253 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:27089587-27089634
64251 chr12 104336857 104336857 1 + A T LUAD 104336862 + 104336842 104336882 41 AATTTTGTAGGCTGAATCTTCTCCATTTGTTGAGCGACTTC AATTTTGTAGGCTGATTCTTCTCCATTTGTTGAGCGACTTC < 41bp 1 0.756985631313711 1 0.880870580673218 experiment 0.486028737372578 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336862 chr12:104336857 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_28255 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:104336849-104336945
64251 chr1 39927600 39927600 1 + T C LUAD 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTCCGACC < 41bp 1 0.152861451758333 1 0.0800562798976898 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927600 nonsynonymous SNV 0.997 4 36 hm5C_associated_SNPs_28256 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39927571-39927617
64251 chr16 58043944 58043944 1 + G T LUAD 58043940 + 58043920 58043960 41 TGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGCGCCAC TGTTCCACCTCAGCCTGTCCCAGATTGTGGTTCTGCGCCAC < 41bp 1 0.695838347074536 1 0.524546980857849 experiment 0.608323305850929 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USB1 ENSG00000103005 CDS Human protein_coding chr16:58043940 chr16:58043944 nonsynonymous SNV 0.986 2 25 hm5C_associated_SNPs_28257 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:58043886-58043954
64251 chr20 279019 279019 1 + G T LUAD 279018 + 278998 279038 41 CATCCTCTTCCGGAACGAGACGGTGGACGTGGAGGACATTG CATCCTCTTCCGGAACGAGACTGTGGACGTGGAGGACATTG < 41bp 1 0.505689472184776 1 0.124995321035385 experiment 0.988621055630447 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZCCHC3 ENSG00000177764 CDS Human other chr20:279018 chr20:279019 synonymous SNV . 0 22 hm5C_associated_SNPs_28258 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:279000-279060
64251 chr12 110032875 110032875 1 + G T LUAD 110032880 + 110032860 110032900 41 CTGAATGCCCTCGGCGTGGGCCACGCCTCTCTGGACCAGCT CTGAATGCCCTCGGCTTGGGCCACGCCTCTCTGGACCAGCT < 41bp 1 0.181759588585899 1 0.105199068784714 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MVK ENSG00000110921 CDS Human protein_coding chr12:110032880 chr12:110032875 nonsynonymous SNV 0.917 5 16 hm5C_associated_SNPs_28260 0 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr10 75526854 75526854 1 + C G LUAD 75526835 + 75526815 75526855 41 GCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCT GCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCGT < 41bp 1 0.118603492456802 1 0.069804459810257 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75526835 chr10:75526854 nonsynonymous SNV 0.995 4 40 hm5C_associated_SNPs_28262 0 0 14 FUS POSTAR2 SRX029328 chr10:75526832-75526855
64251 chr10 75526854 75526854 1 + C G LUAD 75526839 + 75526819 75526859 41 AGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCC AGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCGTGCCC < 41bp 1 0.306353422549507 1 0.418636053800583 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75526839 chr10:75526854 nonsynonymous SNV 0.995 4 36 hm5C_associated_SNPs_28263 0 0 14 FUS POSTAR2 SRX029328 chr10:75526832-75526855
64251 chr21 30701833 30701833 1 + G A LUAD 30701844 + 30701824 30701864 41 ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAG ATGCACAACAGATAATTTCACTGTCTCGAAATGATTTTCAG < 41bp 1 0.146801378235727 1 0.127779573202133 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BACH1 ENSG00000156273 CDS Human protein_coding chr21:30701844 chr21:30701833 nonsynonymous SNV 0.998 1 10 hm5C_associated_SNPs_28264 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30701820-30701840
64251 chr19 50905061 50905061 1 + C G LUAD 50905041 + 50905021 50905061 41 CTGTGACCCCACAGGCCCAGCGCAGCCTGTGCCTGGGGGGC CTGTGACCCCACAGGCCCAGCGCAGCCTGTGCCTGGGGGGG < 41bp 1 0.411253497335302 1 0.226867944002151 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905041 chr19:50905061 nonsynonymous SNV 0.005 0 41 hm5C_associated_SNPs_28265 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:50905034-50905088
64251 chr9 96026304 96026304 1 + G A LUAD 96026292 + 96026272 96026312 41 TCGACTTGGACGGGGACGCACCCGATGAAATTGCCACGTAT TCGACTTGGACGGGGACGCACCCGATGAAATTACCACGTAT < 41bp 1 0.463597956573964 1 0.39787894487381 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96026292 chr9:96026304 nonsynonymous SNV 0.081 4 33 hm5C_associated_SNPs_28267 0 0 3 PPIG POSTAR2 ENCODE chr9:96026269-96026308
64251 chr1 218458671 218458671 1 + G T LUAD 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCTCTCCGGACTCACGTG < 41bp 1 0.273415578123921 1 0.239698886871338 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458671 nonsynonymous SNV 0.008 1 26 hm5C_associated_SNPs_28268 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr2 86705316 86705316 1 + T C LUAD 86705303 + 86705283 86705323 41 TTATTTGCAGGTGCTGCTTACAAGACTTTCTCTTGGCTAAA TTATTTGCAGGTGCTGCTTACAAGACTTTCTCTCGGCTAAA < 41bp 1 0.587086635341984 1 0.363666981458664 experiment 0.825826729316032 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM3A ENSG00000115548 CDS Human protein_coding chr2:86705303 chr2:86705316 nonsynonymous SNV 0.958 4 34 hm5C_associated_SNPs_28271 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:86705304-86705352
64251 chr7 135291548 135291548 1 + C G LUAD 135291549 + 135291529 135291569 41 TTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT TTCGTCATGAAACAAGAATGCACATCTTGAATCTTCTCATT < 41bp 1 0.200635493628882 1 0.0451912581920624 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291549 chr7:135291548 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_28272 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:135291540-135291560
64251 chr16 29994920 29994920 1 + T C LUAD 29994940 + 29994920 29994960 41 TCCGCCCGCCGCCGGGCCTACTGCCGTAACCGAGACCACTT CCCGCCCGCCGCCGGGCCTACTGCCGTAACCGAGACCACTT < 41bp 1 0.591002445458329 1 0.0880445539951324 experiment 0.817995109083342 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994940 chr16:29994920 nonsynonymous SNV 0.456 1 1 hm5C_associated_SNPs_28273 0 0 3 DDX6 POSTAR2 ENCODE chr16:29994896-29994944
64251 chr14 76638254 76638254 1 + C T LUAD 76638267 + 76638247 76638287 41 TAATCTTCTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAG TAATCTTTTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAG < 41bp 1 0.308944511158919 1 0.102438360452652 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76638267 chr14:76638254 synonymous SNV . 0 8 hm5C_associated_SNPs_28274 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:76638194-76638323
64251 chr11 57428873 57428873 1 + C T LUAD 57428893 + 57428873 57428913 41 CTCATCATGGATATCCGGTTCATGGATCTGAAGTAGAGATC TTCATCATGGATATCCGGTTCATGGATCTGAAGTAGAGATC < 41bp 1 0.48566182827477 1 0.0798802077770233 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428893 chr11:57428873 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_28275 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:57428860-57428880
64251 chr3 128973901 128973901 1 + C T LUAD 128973917 + 128973897 128973937 41 AGCTCTGCCCTCGTGTCTTCCTTGGTGTGTAGTTGCTGCTG AGCTTTGCCCTCGTGTCTTCCTTGGTGTGTAGTTGCTGCTG < 41bp 1 0.680499131686675 1 0.721078395843506 experiment 0.63900173662665 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973917 chr3:128973901 nonsynonymous SNV 0.981 4 5 hm5C_associated_SNPs_28277 0 0 3 DDX24 POSTAR2 ENCODE chr3:128973901-128973914
64251 chr19 41778021 41778021 1 + C T LUAD 41778031 + 41778011 41778051 41 GAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC GAGCACCCACTAGCTTCCTCCCGCCTGAAGCTTCTCAACTC < 41bp 1 0.176440518281038 1 0.177653551101685 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41778031 chr19:41778021 synonymous SNV . 0 11 hm5C_associated_SNPs_28278 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41777989-41778041
64251 chr5 149758943 149758943 1 + G T LUAD 149758923 + 149758903 149758943 41 CCAGAGGAGGACTCAGGGAGCAGTGAGGAGGAGTCAGACAG CCAGAGGAGGACTCAGGGAGCAGTGAGGAGGAGTCAGACAT < 41bp 1 0.288371297607596 1 0.455209851264954 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149758923 chr5:149758943 nonsynonymous SNV 0.905 1 41 hm5C_associated_SNPs_28280 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149758896-149758969
64251 chr9 97823056 97823056 1 + C A LUAD 97823068 + 97823048 97823088 41 CAAAGCCTCCAGAGGACATACCACCTCCAGGATCAGGATGC CAAAGCCTACAGAGGACATACCACCTCCAGGATCAGGATGC < 41bp 1 0.0611932220857956 1 0.0364265739917755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97823068 chr9:97823056 synonymous SNV . 0 9 hm5C_associated_SNPs_28281 0 0 7 BUD13 POSTAR2 ENCODE chr9:97822938-97823062
64251 chr9 97823056 97823056 1 + C A LUAD 97823072 + 97823052 97823092 41 GCCTCCAGAGGACATACCACCTCCAGGATCAGGATGCAGAG GCCTACAGAGGACATACCACCTCCAGGATCAGGATGCAGAG < 41bp 1 0.710921041570209 1 0.915746986865997 experiment 0.578157916859583 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97823072 chr9:97823056 synonymous SNV . 0 5 hm5C_associated_SNPs_28282 0 0 7 BUD13 POSTAR2 ENCODE chr9:97822938-97823062
64251 chr8 145065687 145065687 1 + A T LUAD 145065698 + 145065678 145065718 41 AAGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTC AAGGGGGCTTCCCCCAGGGGCCATATCCCCAGAGCCCCTTC < 41bp 1 0.217840719579241 1 0.058133989572525 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065698 chr8:145065687 nonsynonymous SNV 0.746 0 10 hm5C_associated_SNPs_28283 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr8 145065687 145065687 1 + A T LUAD 145065699 + 145065679 145065719 41 AGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTCC AGGGGGCTTCCCCCAGGGGCCATATCCCCAGAGCCCCTTCC < 41bp 1 0.179633150129164 1 0.106619387865067 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065699 chr8:145065687 nonsynonymous SNV 0.746 0 9 hm5C_associated_SNPs_28284 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145065677-145065709
64251 chr7 65610483 65610483 1 + A T LUAD 65610481 + 65610461 65610501 41 CCTGTGACTGCTGTGGAGATCCAGCTGGTGAGTGAAGGGCG CCTGTGACTGCTGTGGAGATCCTGCTGGTGAGTGAAGGGCG < 41bp 1 0.379314078455808 1 0.172158807516098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CRCP ENSG00000241258;ENSG00000249319 CDS Human other chr7:65610481 chr7:65610483 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_28285 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:65610466-65610487
64251 chr6 27101068 27101068 1 + A G LUAD 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGGCAACAA < 41bp 1 0.586676579456271 1 0.574169337749481 experiment 0.826646841087458 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101068 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_28286 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101068 27101068 1 + A G LUAD 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCGGCAACAAGAAGACCC < 41bp 1 0.345106203519486 1 0.274779289960861 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101068 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_28287 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101068 27101068 1 + A G LUAD 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGGCAACAAGAAGACCCG < 41bp 1 0.495909230956545 1 0.320564687252045 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101068 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_28288 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr12 8196336 8196336 1 + C T LUAD 8196351 + 8196331 8196371 41 TTTCCCGAAAGAGAAGACACCCTCCAGATGATGATGTAAGT TTTCCTGAAAGAGAAGACACCCTCCAGATGATGATGTAAGT < 41bp 1 0.0199966193788424 1 0.0886635184288025 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8196351 chr12:8196336 stopgain 1.000 0 6 hm5C_associated_SNPs_28289 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:8196305-8196343
64251 chr12 58109617 58109617 1 + T A LUAD 58109602 + 58109582 58109622 41 ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTAAGTGCT < 41bp 1 0.399978160173652 1 0.067376434803009 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OS9 ENSG00000135506 CDS Human protein_coding chr12:58109602 chr12:58109617 stopgain 0.959 1 36 hm5C_associated_SNPs_28290 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:58109611-58109640
64251 chr1 155030164 155030164 1 + G T LUAD 155030158 + 155030138 155030178 41 CTTTGACCTGCCAGCTGAGGCCAGGTGCACAGTGTGCATCT CTTTGACCTGCCAGCTGAGGCCAGGTTCACAGTGTGCATCT < 41bp 1 0.653876227764175 1 0.518568575382233 experiment 0.692247544471651 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155030158 chr1:155030164 nonsynonymous SNV 0.935 3 27 hm5C_associated_SNPs_28291 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155030140-155030178
64251 chr1 7796531 7796531 1 + G C LUAD 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCGCAATGACCCTACTCCACCTGGCCGCTGCCCAGGG < 41bp 1 0.24502063818699 1 0.199866950511932 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796531 nonsynonymous SNV 0.925 4 8 hm5C_associated_SNPs_28294 0 0 2 BUD13 POSTAR2 ENCODE chr1:7796466-7796582
64251 chr3 73113183 73113183 1 + G T LUAD 73113185 + 73113165 73113205 41 ATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTT ATGGGCCTGGGACACCCATGCCACTTAATCGACCAAAGGTT < 41bp 1 0.167232211452807 1 0.109184920787811 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113185 chr3:73113183 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_28295 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 73113183 73113183 1 + G T LUAD 73113186 + 73113166 73113206 41 TGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTT TGGGCCTGGGACACCCATGCCACTTAATCGACCAAAGGTTT < 41bp 1 0.198451100200936 1 0.0275746285915375 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113186 chr3:73113183 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_28296 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr7 77398052 77398052 1 + G T LUAD 77398071 + 77398051 77398091 41 TGTGGGTTCGTCCAGGAGAACAAATGATCCCTGTGGCTGAT TTTGGGTTCGTCCAGGAGAACAAATGATCCCTGTGGCTGAT < 41bp 1 0.464481415391873 1 0.226339727640152 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77398071 chr7:77398052 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_28297 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:77398016-77398077
64251 chr12 27788039 27788039 1 + G C LUAD 27788020 + 27788000 27788040 41 CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCAGA CCCAGATTCAACAGCAGAAACGCTTGTTGAATGGCTTCACA < 41bp 1 0.335757815552077 1 0.122868835926056 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27788020 chr12:27788039 nonsynonymous SNV 0.996 1 40 hm5C_associated_SNPs_28298 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27787892-27788054
64251 chr2 69379389 69379389 1 + G T LUAD 69379375 + 69379355 69379395 41 CTGGCTCTCCTCTGGTGGTTCTGGCCCCTCTGCTGCACTGT CTGGCTCTCCTCTGGTGGTTCTGGCCCCTCTGCTTCACTGT < 41bp 1 0.444622231719222 1 0.69121116399765 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANTXR1 ENSG00000169604 CDS Human protein_coding chr2:69379375 chr2:69379389 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_28299 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:69379352-69379394
64251 chr2 24888641 24888641 1 + A G LUAD 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACGGAAAAGAGGCGCAGGGAGCGAGAAAATAAATA < 41bp 1 0.326713472526236 1 0.638537108898163 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888641 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_28302 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:24888629-24888650
64251 chr11 308242 308242 1 + C T LUAD 308239 + 308219 308259 41 TCCTGTCAACAGCGGCCAGCCTCCCAACTACGAGATGCTCA TCCTGTCAACAGCGGCCAGCCTCTCAACTACGAGATGCTCA < 41bp 1 0.183959200453076 1 0.133988708257675 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IFITM2 ENSG00000185201 CDS Human protein_coding chr11:308239 chr11:308242 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_28303 0 0 9 LIN28A POSTAR2 GSE39873,GSM980594 chr11:308240-308260
64251 chr1 200818117 200818117 1 + G T LUAD 200818115 + 200818095 200818135 41 AAACAGGGCTTCCACAGGGACGGGACACTACCCAGCTGTTG AAACAGGGCTTCCACAGGGACGTGACACTACCCAGCTGTTG < 41bp 1 0.56842586647666 1 0.215630799531937 experiment 0.863148267046679 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200818115 chr1:200818117 synonymous SNV . 0 23 hm5C_associated_SNPs_28304 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:200818095-200818134
64251 chr12 22811992 22811992 1 + A T LUAD 22811993 + 22811973 22812013 41 ATCCATGCTATTCATGCACACAATGGCTGGATCCCCAAATC ATCCATGCTATTCATGCACTCAATGGCTGGATCCCCAAATC < 41bp 1 0.487830885388965 1 0.56351363658905 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22811993 chr12:22811992 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_28306 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:22811953-22812004
64251 chr2 232577179 232577179 1 + G T LUAD 232577195 + 232577175 232577215 41 AGATGAGGAAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTG AGATTAGGAAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTG < 41bp 1 0.704894242685545 1 0.243804097175598 experiment 0.59021151462891 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232577195 chr2:232577179 stopgain 1.000 0 5 hm5C_associated_SNPs_28309 0 0 65 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:232577140-232577180
64251 chr19 7620629 7620629 1 + C T LUAD 7620645 + 7620625 7620665 41 GCAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA GCAGTGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA < 41bp 1 0.255361449321523 1 0.466932684183121 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620645 chr19:7620629 nonsynonymous SNV 0.998 3 5 hm5C_associated_SNPs_28310 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr19 7620629 7620629 1 + C T LUAD 7620646 + 7620626 7620666 41 CAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG CAGTGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG < 41bp 1 0.477437511039022 1 0.698079288005829 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620646 chr19:7620629 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_28311 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr9 125154739 125154739 1 + G T LUAD 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAATACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA < 41bp 1 0.0172113841552791 1 0.0365857481956482 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154739 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_28312 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr2 98263849 98263849 1 + A G LUAD 98263858 + 98263838 98263878 41 CTTCAGGCACCAGGGAAGACCCTAATTTAGTCCCCTCCATC CTTCAGGCACCGGGGAAGACCCTAATTTAGTCCCCTCCATC < 41bp 1 0.373566971168795 1 0.0602681934833527 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263858 chr2:98263849 nonsynonymous SNV 0.996 2 12 hm5C_associated_SNPs_28313 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:98263811-98263861
64251 chr11 75115797 75115797 1 + A G LUAD 75115815 + 75115795 75115835 41 CCACGTGAGCATTGTGGAACCCAAAGATGAGATACTGCCCA CCGCGTGAGCATTGTGGAACCCAAAGATGAGATACTGCCCA < 41bp 1 0.660376493637025 1 0.40977081656456 experiment 0.679247012725949 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 CDS Human protein_coding chr11:75115815 chr11:75115797 nonsynonymous SNV 0.881 0 3 hm5C_associated_SNPs_28314 0 0 54 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:75115760-75115820
64251 chrX 56591627 56591627 1 + G T LUAD 56591612 + 56591592 56591632 41 AGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCCAGACACA AGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCCATACACA < 41bp 1 0.36387854049715 1 0.483771860599518 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591612 chrX:56591627 nonsynonymous SNV 0.977 4 36 hm5C_associated_SNPs_28315 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:56591620-56591640
64251 chr5 145843189 145843189 1 + C T LUAD 145843198 + 145843178 145843218 41 TTCAACTCCTGCTCCTACAGCCACACCTGTGCAAACCGTTC TTCAACTCCTGTTCCTACAGCCACACCTGTGCAAACCGTTC < 41bp 1 0.238172309680236 1 0.212365746498108 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145843198 chr5:145843189 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_28316 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:145843167-145843189
64251 chr5 145843190 145843190 1 + T G LUAD 145843198 + 145843178 145843218 41 TTCAACTCCTGCTCCTACAGCCACACCTGTGCAAACCGTTC TTCAACTCCTGCGCCTACAGCCACACCTGTGCAAACCGTTC < 41bp 1 0.326662133112386 1 0.104477286338806 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145843198 chr5:145843190 synonymous SNV . 0 13 hm5C_associated_SNPs_28317 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:145843170-145843191
64251 chr5 145843192 145843192 1 + C T LUAD 145843198 + 145843178 145843218 41 TTCAACTCCTGCTCCTACAGCCACACCTGTGCAAACCGTTC TTCAACTCCTGCTCTTACAGCCACACCTGTGCAAACCGTTC < 41bp 1 0.273269627167316 1 0.196782171726227 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145843198 chr5:145843192 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_28318 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:145843170-145843202
64251 chr17 21731297 21731297 1 + G A LUAD 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC ACAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.140144585761117 1 0.135018914937973 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731297 nonsynonymous SNV 0.990 0 1 hm5C_associated_SNPs_28319 0 0 6 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr19 48982391 48982391 1 + G T LUAD 48982399 + 48982379 48982419 41 GGGCGGCTGTGAGTGTGGACCCCTTCTATGAGATGCTGGCA GGGCGGCTGTGATTGTGGACCCCTTCTATGAGATGCTGGCA < 41bp 1 0.0411827674464699 1 0.163322865962982 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CYTH2 ENSG00000105443 CDS Human protein_coding chr19:48982399 chr19:48982391 nonsynonymous SNV 0.999 2 13 hm5C_associated_SNPs_28320 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:48982388-48982418
64251 chrX 73045838 73045838 1 - C G LUAD 73045845 - 73045825 73045865 41 GACAGCCTGAACTCCCTGCTCATAGTAGTGGCCAAATAATT GACAGCCTGAACTCCCTGCTCATAGTACTGGCCAAATAATT < 41bp 1 0.0963562805023935 1 0.10574334859848 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045845 chrX:73045838 . . 0 28 hm5C_associated_SNPs_28322 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045838 73045838 1 - C G LUAD 73045854 - 73045834 73045874 41 TCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTAGTGGC TCCCAAGGGGACAGCCTGAACTCCCTGCTCATAGTACTGGC < 41bp 1 0.318722200075285 1 0.391038596630096 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045854 chrX:73045838 . . 0 37 hm5C_associated_SNPs_28323 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr15 29346679 29346679 1 + C A LUAD 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG ACCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG < 41bp 1 0.765449115832291 1 0.334880769252777 experiment 0.469101768335419 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346679 nonsynonymous SNV 0.117 1 1 hm5C_associated_SNPs_28324 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346644-29346682
64251 chr22 41913580 41913580 1 + C T LUAD 41913571 + 41913551 41913591 41 ATGGGTGCAGAAATTGGGGCCACCACTTCCGTGTTCCCTTA ATGGGTGCAGAAATTGGGGCCACCACTTCTGTGTTCCCTTA < 41bp 1 0.57625755383501 1 0.330467462539673 experiment 0.84748489232998 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41913571 chr22:41913580 synonymous SNV . 0 30 hm5C_associated_SNPs_28328 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:41913579-41913614
64251 chr5 14291337 14291337 1 + G T LUAD 14291323 + 14291303 14291343 41 TCCAGCTGAGGCTGTTTGAACAGGATGCTGAGAAGGTAAAG TCCAGCTGAGGCTGTTTGAACAGGATGCTGAGAATGTAAAG < 41bp 1 0.550656694316824 1 0.449169427156448 experiment 0.898686611366353 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14291323 chr5:14291337 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_28329 0 0 2 PRPF8 POSTAR2 ENCODE chr5:14291322-14291379
64251 chr5 14280519 14280519 1 + C G LUAD 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGGAGACTGATTTCCTATCTAGCCTGT < 41bp 1 0.317725191305255 1 0.159346163272858 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280519 synonymous SNV . 0 23 hm5C_associated_SNPs_28333 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr2 73461511 73461511 1 + T A LUAD 73461503 + 73461483 73461523 41 CGGGCCGCTGAATAAGCTTCCAAAATGATGGTGAGTGGCGT CGGGCCGCTGAATAAGCTTCCAAAATGAAGGTGAGTGGCGT < 41bp 1 0.632401804951002 1 0.51884663105011 experiment 0.735196390097996 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73461503 chr2:73461511 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_28335 0 0 7 DDX3X POSTAR2 ENCODE chr2:73461495-73461513
64251 chr11 722496 722496 1 + C A LUAD 722478 + 722458 722498 41 TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTCCC TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTACC < 41bp 1 0.212450842040668 1 0.106298387050629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722478 chr11:722496 nonsynonymous SNV . 0 39 hm5C_associated_SNPs_28336 0 0 3 GRWD1 POSTAR2 ENCODE chr11:722470-722502
64251 chr6 33243778 33243778 1 + C T LUAD 33243758 + 33243738 33243778 41 CCAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCC CCAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCT < 41bp 1 0.144710303801097 1 0.0408784747123718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243758 chr6:33243778 stopgain 0.998 1 41 hm5C_associated_SNPs_28338 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr6 33243778 33243778 1 + C T LUAD 33243759 + 33243739 33243779 41 CAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCCA CAGGTGGAACGTGTGATCACCATTATGCAGAATCCACGCTA < 41bp 1 0.34970026891938 1 0.157465636730194 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243759 chr6:33243778 stopgain 0.998 1 40 hm5C_associated_SNPs_28339 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr6 33243778 33243778 1 + C T LUAD 33243772 + 33243752 33243792 41 TGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA TGATCACCATTATGCAGAATCCACGCTAGTACAAGATCCCA < 41bp 1 0.26903442632418 1 0.031734436750412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243772 chr6:33243778 stopgain 0.998 1 27 hm5C_associated_SNPs_28340 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr1 44878341 44878341 1 + G T LUAD 44878350 + 44878330 44878370 41 TGCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTA TGCTGTCTCTGTCCTCATTTCTGATCGGGAAGCCTCATCTA < 41bp 1 0.407415379380952 1 0.265668570995331 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878350 chr1:44878341 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_28341 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44878329-44878367
64251 chr1 95639405 95639405 1 + C T LUAD 95639425 + 95639405 95639445 41 CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCG TGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCG < 41bp 1 0.282524786817786 1 0.437839716672897 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM56;TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 CDS Human other chr1:95639425 chr1:95639405 nonsynonymous SNV 0.983 5 1 hm5C_associated_SNPs_28342 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:95639398-95639431
64251 chr21 30715097 30715097 1 + T C LUAD 30715106 + 30715086 30715126 41 TGTCGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAGAT TGTCGTCAGAGCGGTGGGATCTCAGATTTCTGTCAGCAGAT < 41bp 1 0.660107727835805 1 0.697778582572937 experiment 0.679784544328391 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715106 chr21:30715097 synonymous SNV . 0 12 hm5C_associated_SNPs_28343 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr17 21731316 21731316 1 + A T LUAD 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCGGTTCTCTTTCTGACTACAACATCC < 41bp 1 0.178819904505978 1 0.165258556604385 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731316 synonymous SNV . 0 20 hm5C_associated_SNPs_28356 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr15 40284993 40284993 1 + A T LUAD 40284974 + 40284954 40284994 41 GTTTTCCTCCACACAGGTCACTTAACTGGGATGGTTGGCAC GTTTTCCTCCACACAGGTCACTTAACTGGGATGGTTGGCTC < 41bp 1 0.41059667868121 1 0.739570796489716 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40284974 chr15:40284993 nonsynonymous SNV 0.997 4 40 hm5C_associated_SNPs_28359 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr15:40284976-40284997
64251 chr10 35495854 35495854 1 + C T LUAD 35495841 + 35495821 35495861 41 AGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTC AGCTGCCACTGGTGACATGCCAACTTACCAGATTCGAGCTC < 41bp 1 0.757998793815295 1 0.352902233600616 experiment 0.484002412369411 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CREM ENSG00000095794 CDS Human protein_coding chr10:35495841 chr10:35495854 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_28360 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:35495849-35495897
64251 chr18 55996235 55996235 1 + C T LUAD 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTTCTCGGAGTCGGACAATAACATCAGACAGATCAA < 41bp 1 0.297398104240171 1 0.214750647544861 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996235 nonsynonymous SNV 0.749 0 8 hm5C_associated_SNPs_28362 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr14 105355939 105355939 1 + G T LUAD 105355938 + 105355918 105355958 41 ACGGCTCCCCCAAACACACACGCTCCCACACCTCAACAGCC ACGGCTCCCCCAAACACACACTCTCCCACACCTCAACAGCC < 41bp 1 0.0273809335531152 1 0.127631634473801 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105355938 chr14:105355939 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_28364 0 0 1 FBL POSTAR2 GSE43666,GSM1067864 chr14:105355921-105355942
64251 chr1 62237198 62237198 1 + A G LUAD 62237207 + 62237187 62237227 41 TGCATTATTACAACAAACCACTGGATCTTTGAGACTGATTG TGCATTATTACGACAAACCACTGGATCTTTGAGACTGATTG < 41bp 1 0.558134057642347 1 0.256442725658417 experiment 0.883731884715306 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62237207 chr1:62237198 nonsynonymous SNV 0.607 3 12 hm5C_associated_SNPs_28366 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:62237188-62237209
64251 chr21 47706941 47706941 1 + G C LUAD 47706944 + 47706924 47706964 41 CAGAAATTTGACCTGGGGATCATCTGTGTTGACAACAAGAA CAGAAATTTGACCTGGGCATCATCTGTGTTGACAACAAGAA < 41bp 1 0.154305740165898 1 0.170276254415512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control YBEY ENSG00000182362 CDS Human protein_coding chr21:47706944 chr21:47706941 synonymous SNV . 0 18 hm5C_associated_SNPs_28367 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:47706923-47706951
64251 chr4 1730435 1730435 1 + G T LUAD 1730416 + 1730396 1730436 41 AAGTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAGCCCTGA AAGTCTGGTTGCAGTGAGGCCCAGCCCCCAGAAAGCCCTTA < 41bp 1 0.0978135724777768 1 0.251341700553894 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730416 chr4:1730435 stopgain 0.003 0 40 hm5C_associated_SNPs_28368 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr4:1730420-1730440
64251 chr5 139820670 139820670 1 + G A LUAD 139820688 + 139820668 139820708 41 TAGATATTGTGAAATTATTACTTCTTCATGATGCTGATGTC TAAATATTGTGAAATTATTACTTCTTCATGATGCTGATGTC < 41bp 1 0.08715817624128 1 0.204266935586929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139820688 chr5:139820670 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_28369 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139820655-139820715
64251 chrX 41025388 41025388 1 + G A LUAD 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCAAGAAGGAA < 41bp 1 0.138799785507153 1 0.0675138533115387 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025388 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_28370 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chr1 120285561 120285561 1 + G T LUAD 120285545 + 120285525 120285565 41 GGGCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCA GGGCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGTCTCA < 41bp 1 0.511263369894152 1 0.055134654045105 experiment 0.977473260211695 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285545 chr1:120285561 synonymous SNV . 0 37 hm5C_associated_SNPs_28371 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:120285556-120285654
64251 chr1 120285561 120285561 1 + G T LUAD 120285547 + 120285527 120285567 41 GCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCAAT GCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGTCTCAAT < 41bp 1 0.253372236320872 1 0.0160441398620605 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285547 chr1:120285561 synonymous SNV . 0 35 hm5C_associated_SNPs_28372 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:120285556-120285654
64251 chr2 162242061 162242061 1 + C G LUAD 162242075 + 162242055 162242095 41 GGGTCACTTAAACAAGCCATCTATCCAGGTATTGCCTATAT GGGTCAGTTAAACAAGCCATCTATCCAGGTATTGCCTATAT < 41bp 1 0.102466097245538 1 0.153794348239899 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162242075 chr2:162242061 nonsynonymous SNV 0.999 4 7 hm5C_associated_SNPs_28373 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:162241974-162242062
64251 chr8 30332327 30332327 1 + G T LUAD 30332319 + 30332299 30332339 41 GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT GGACCCTATTTGTCAGTGGCCTTCCTCTTGATATCAAACCT < 41bp 1 0.0614846547943741 1 0.0538283288478851 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBPMS ENSG00000157110 CDS Human protein_coding chr8:30332319 chr8:30332327 synonymous SNV . 0 29 hm5C_associated_SNPs_28374 0 0 12 HNRNPD POSTAR2 GSE52971,GSM1279665 chr8:30332300-30332340
64251 chr8 56866463 56866463 1 + A T LUAD 56866453 + 56866433 56866473 41 TTAGTCCCAAGCCACAGAAGCCATGGGATAAAGATGCCTGG TTAGTCCCAAGCCACAGAAGCCATGGGATATAGATGCCTGG < 41bp 1 0.0940224487267031 1 0.402371108531952 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56866453 chr8:56866463 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_28375 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:56866449-56866476
64251 chr12 22208502 22208502 1 + G A LUAD 22208514 + 22208494 22208534 41 TCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATT TCTCTGTTATGAGACGCCATCAGTTTCGATGGAGTGAAATT < 41bp 1 0.303879355808166 1 0.106404840946198 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22208514 chr12:22208502 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_28376 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:22208460-22208516
64251 chr1 39927593 39927593 1 + G A LUAD 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACCAAGTTAGAGATGACTGCTGTGGCTAACATTTTCGACC < 41bp 1 0.129440630311624 1 0.0850393176078796 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927593 nonsynonymous SNV 0.999 4 29 hm5C_associated_SNPs_28377 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927571-39927596
64251 chr8 20073974 20073974 1 + A G LUAD 20073985 + 20073965 20074005 41 GAGGGGCAGATCTATGTGGACAGACAGCTGCACAACAGACA GAGGGGCAGGTCTATGTGGACAGACAGCTGCACAACAGACA < 41bp 1 0.313044659204718 1 0.267957597970963 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20073985 chr8:20073974 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_28378 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:20073949-20073981
64251 chr11 65270568 65270568 1 + C G LUAD 65270555 + 65270535 65270575 41 GATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTT GATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCGAATGTTT < 41bp 1 0.471377060720704 1 0.181026488542557 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270555 chr11:65270568 . . 0 34 hm5C_associated_SNPs_28382 0 0 98 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65270520-65270580
64251 chr11 65270568 65270568 1 + C G LUAD 65270560 + 65270540 65270580 41 AGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTT AGTGGATTGAGGAGGCTGTGCTGTGTGCGAATGTTTCGTTT < 41bp 1 0.558570455572122 1 0.110893368721008 experiment 0.882859088855755 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270560 chr11:65270568 . . 0 29 hm5C_associated_SNPs_28383 0 0 98 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65270520-65270580
64251 chr11 65270568 65270568 1 + C G LUAD 65270567 + 65270547 65270587 41 TGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAG TGAGGAGGCTGTGCTGTGTGCGAATGTTTCGTTTGCCTCAG < 41bp 1 0.556961027196536 1 0.400014966726303 experiment 0.886077945606929 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270567 chr11:65270568 . . 0 22 hm5C_associated_SNPs_28384 0 0 98 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65270520-65270580
64251 chr7 98609796 98609796 1 + G A LUAD 98609794 + 98609774 98609814 41 TCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC TCTCTCGGCCGCCGGGCAGCCAAAGAACATGGACAGCCAGC < 41bp 1 0.223860250259999 1 0.790199160575867 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98609794 chr7:98609796 nonsynonymous SNV 0.968 2 23 hm5C_associated_SNPs_28386 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98609763-98609796
64251 chr17 66352936 66352936 1 + A T LUAD 66352925 + 66352905 66352945 41 AAGTATGCTGAGAAAGCAACCCAGTTCATCCAGCGTGCAAG AAGTATGCTGAGAAAGCAACCCAGTTCATCCTGCGTGCAAG < 41bp 1 0.308407485940755 1 0.297095417976379 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARSG ENSG00000141337 CDS Human protein_coding chr17:66352925 chr17:66352936 nonsynonymous SNV 0.777 1 32 hm5C_associated_SNPs_28387 0 0 1 GRWD1 POSTAR2 ENCODE chr17:66352810-66352973
64251 chr3 193336694 193336694 1 + G A LUAD 193336676 + 193336656 193336696 41 AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCGTG AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCATG < 41bp 1 0.0453452188126769 1 0.0491491556167603 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336676 chr3:193336694 nonsynonymous SNV 0.999 0 39 hm5C_associated_SNPs_28388 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:193336680-193336700
64251 chr11 65273348 65273348 1 + G C LUAD 65273330 + 65273310 65273350 41 ACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGAG ACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGCAG < 41bp 1 0.745764038040575 1 0.463474273681641 experiment 0.50847192391885 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273330 chr11:65273348 . . 0 39 hm5C_associated_SNPs_28389 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr11 65273348 65273348 1 + G C LUAD 65273337 + 65273317 65273357 41 TGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATAG TGCTGGGTGGGAACATGTAACTTGTAGACTGCAGAAGATAG < 41bp 1 0.679527713840164 1 0.094802588224411 experiment 0.640944572319671 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273337 chr11:65273348 . . 0 32 hm5C_associated_SNPs_28390 0 0 86 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr4 106861750 106861750 1 + C G LUAD 106861769 + 106861749 106861789 41 GCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT GGAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT < 41bp 1 0.768376489337033 1 0.788072288036346 experiment 0.463247021325934 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPNT ENSG00000168743 CDS Human protein_coding chr4:106861769 chr4:106861750 nonsynonymous SNV 0.905 5 2 hm5C_associated_SNPs_28391 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:106861744-106861771
64251 chr5 64082385 64082385 1 + G A LUAD 64082382 + 64082362 64082402 41 TCCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA TCCTTTTGATGACATCATTCCAAAGGAAATTAAAAGGCTGA < 41bp 1 0.229716601990323 1 0.657532632350922 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64082382 chr5:64082385 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_28393 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:64082348-64082392
64251 chrX 48759733 48759733 1 + G C LUAD 48759720 + 48759700 48759740 41 GGACCGCGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAG GGACCGCGGGTATGACAAGGCAGACCGGGAAGACGGCAAAG < 41bp 1 0.63086530889816 1 0.208364635705948 experiment 0.73826938220368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759720 chrX:48759733 nonsynonymous SNV 0.997 0 34 hm5C_associated_SNPs_28395 0 0 6 DDX24 POSTAR2 ENCODE chrX:48759698-48759769
64251 chr19 49100065 49100065 1 + T G LUAD 49100079 + 49100059 49100099 41 CTGGGCTCCGTCGTGGCACACTCAACCTTCAGCGCCATGAA CTGGGCGCCGTCGTGGCACACTCAACCTTCAGCGCCATGAA < 41bp 1 0.799781992354742 1 0.422555983066559 experiment 0.400436015290516 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100079 chr19:49100065 nonsynonymous SNV 0.049 2 7 hm5C_associated_SNPs_28396 0 0 1 SF3B1 POSTAR2 ENCODE chr19:49100033-49100070
64251 chr20 42695418 42695418 1 + C G LUAD 42695411 + 42695391 42695431 41 TTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAA TTCCCCAGCAGCTCGGGATCCTGCTCAGCTGGCCCATCCAA < 41bp 1 0.439042618047212 1 0.138940393924713 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695411 chr20:42695418 nonsynonymous SNV 0.909 1 28 hm5C_associated_SNPs_28398 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr11 118452185 118452185 1 + T A LUAD 118452203 + 118452183 118452223 41 ATTTTAGAAGATTTGGAGACCCTAAGGCTCTTCTCAAGAGT ATATTAGAAGATTTGGAGACCCTAAGGCTCTTCTCAAGAGT < 41bp 1 0.1704416007753 1 0.083447128534317 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118452203 chr11:118452185 synonymous SNV . 0 3 hm5C_associated_SNPs_28399 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:118452160-118452198
64251 chr17 77757733 77757733 1 + G T LUAD 77757717 + 77757697 77757737 41 CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGA CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCTGGGA < 41bp 1 0.114185863114278 1 0.149566531181335 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77757717 chr17:77757733 nonsynonymous SNV 0.214 3 37 hm5C_associated_SNPs_28400 0 0 1 PPIG POSTAR2 ENCODE chr17:77757695-77757764
64251 chr5 102343170 102343170 1 + G T LUAD 102343174 + 102343154 102343194 41 TCTGCAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTT TCTGCAGAGTCTTCAGTGAGCAGTCCTCTGCCAGGCCAGTT < 41bp 1 0.207421005027849 1 0.332061260938644 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAM ENSG00000145730 CDS Human protein_coding chr5:102343174 chr5:102343170 nonsynonymous SNV 0.940 0 17 hm5C_associated_SNPs_28401 0 0 1 RPS3 POSTAR2 ENCODE chr5:102343167-102343261
64251 chr17 76061008 76061008 1 + G A LUAD 76061001 + 76060981 76061021 41 TGGCGCACCTGTTGCTGCCTCAGCCCTGTGCAAACCAGGTA TGGCGCACCTGTTGCTGCCTCAGCCCTATGCAAACCAGGTA < 41bp 1 0.198592404733911 1 0.666551828384399 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76061001 chr17:76061008 synonymous SNV . 0 28 hm5C_associated_SNPs_28402 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:76060977-76061015
64251 chr3 10320661 10320661 1 + C A LUAD 10320677 + 10320657 10320697 41 CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC CCCTAACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC < 41bp 1 0.78210509621715 1 0.784127771854401 experiment 0.4357898075657 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320677 chr3:10320661 synonymous SNV . 0 5 hm5C_associated_SNPs_28403 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:10320614-10320665
64251 chr6 44219921 44219921 1 + A G LUAD 44219903 + 44219883 44219923 41 CCAAGGAGGGTCTGGAGCTGCCTGAGGATGAGGAGGAGAAG CCAAGGAGGGTCTGGAGCTGCCTGAGGATGAGGAGGAGGAG < 41bp 1 0.475719949054164 1 0.178374111652374 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219903 chr6:44219921 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_28404 0 0 61 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219921 44219921 1 + A G LUAD 44219904 + 44219884 44219924 41 CAAGGAGGGTCTGGAGCTGCCTGAGGATGAGGAGGAGAAGA CAAGGAGGGTCTGGAGCTGCCTGAGGATGAGGAGGAGGAGA < 41bp 1 0.765465004319654 1 0.374061822891235 experiment 0.469069991360692 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219904 chr6:44219921 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_28405 0 0 61 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr22 42276797 42276797 1 + G T LUAD 42276812 + 42276792 42276832 41 CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG CGCCTTGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG < 41bp 1 0.0604861968764007 1 0.04303377866745 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276812 chr22:42276797 stopgain 1.000 0 6 hm5C_associated_SNPs_28407 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:42276795-42276820
64251 chr1 109806903 109806903 1 + T A LUAD 109806891 + 109806871 109806911 41 AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCA AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCAAGGTCTGCA < 41bp 1 0.0340295780120406 1 0.0523159801959991 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806891 chr1:109806903 nonsynonymous SNV 0.797 0 33 hm5C_associated_SNPs_28408 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806903 109806903 1 + T A LUAD 109806892 + 109806872 109806912 41 GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCAC GAGCAGAGGGCAACCTGGGCCCCCGGCTGCAAGGTCTGCAC < 41bp 1 0.163187299042717 1 0.410556823015213 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806892 chr1:109806903 nonsynonymous SNV 0.797 0 32 hm5C_associated_SNPs_28409 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806903 109806903 1 + T A LUAD 109806893 + 109806873 109806913 41 AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACC AGCAGAGGGCAACCTGGGCCCCCGGCTGCAAGGTCTGCACC < 41bp 1 0.301163214254921 1 0.230568557977676 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806893 chr1:109806903 nonsynonymous SNV 0.797 0 31 hm5C_associated_SNPs_28410 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806903 109806903 1 + T A LUAD 109806894 + 109806874 109806914 41 GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCT GCAGAGGGCAACCTGGGCCCCCGGCTGCAAGGTCTGCACCT < 41bp 1 0.165917589915121 1 0.459966540336609 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806894 chr1:109806903 nonsynonymous SNV 0.797 0 30 hm5C_associated_SNPs_28411 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806903 109806903 1 + T A LUAD 109806895 + 109806875 109806915 41 CAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCTG CAGAGGGCAACCTGGGCCCCCGGCTGCAAGGTCTGCACCTG < 41bp 1 0.29030569500004 1 0.6855708360672 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806895 chr1:109806903 nonsynonymous SNV 0.797 0 29 hm5C_associated_SNPs_28412 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr12 121001395 121001395 1 + C A LUAD 121001403 + 121001383 121001423 41 CTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACC CTTCACACGCCTAAGCAGCTCTCCTTGTTACTACTTTTACC < 41bp 1 0.38765215011485 1 0.167015761137009 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001403 chr12:121001395 synonymous SNV . 0 13 hm5C_associated_SNPs_28413 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:121001363-121001426
64251 chr12 121001395 121001395 1 + C A LUAD 121001406 + 121001386 121001426 41 CACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACCAAG CACACGCCTAAGCAGCTCTCCTTGTTACTACTTTTACCAAG < 41bp 1 0.256187956576046 1 0.0650007128715515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001406 chr12:121001395 synonymous SNV . 0 10 hm5C_associated_SNPs_28414 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:121001363-121001426
64251 chr10 43883130 43883130 1 - T G LUAD 43883122 - 43883102 43883142 41 AAGATGATGTAAAAATGGCCCTGAAAAAAGACAGGGAAAGC AAGATGATGTAACAATGGCCCTGAAAAAAGACAGGGAAAGC < 41bp 1 0.55925124798106 1 0.401403605937958 experiment 0.88149750403788 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883122 chr10:43883130 nonsynonymous SNV 0.993 1 13 hm5C_associated_SNPs_28415 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:43883012-43883328
64251 chr10 43883130 43883130 1 - T G LUAD 43883124 - 43883104 43883144 41 AGAAGATGATGTAAAAATGGCCCTGAAAAAAGACAGGGAAA AGAAGATGATGTAACAATGGCCCTGAAAAAAGACAGGGAAA < 41bp 1 0.154570833360323 1 0.123766213655472 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883124 chr10:43883130 nonsynonymous SNV 0.993 1 15 hm5C_associated_SNPs_28416 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:43883012-43883328
64251 chr10 43883130 43883130 1 - T G LUAD 43883145 - 43883125 43883165 41 GGCTTTTGTTGAACTTGGATCAGAAGATGATGTAAAAATGG GGCTTTTGTTGAACTTGGATCAGAAGATGATGTAACAATGG < 41bp 1 0.712124225731292 1 0.695867717266083 experiment 0.575751548537416 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883145 chr10:43883130 nonsynonymous SNV 0.993 1 36 hm5C_associated_SNPs_28417 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:43883012-43883328
64251 chr8 144680972 144680972 1 + C T LUAD 144680962 + 144680942 144680982 41 AGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAGCCTG AGCCGCTGGTCATCGGGCGGCTGCCGGACCTGCCCAGCCTG < 41bp 1 0.383865320720946 1 0.620493113994598 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144680962 chr8:144680972 nonsynonymous SNV 0.961 2 31 hm5C_associated_SNPs_28418 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:144680960-144680980
64251 chr2 220412305 220412305 1 + C T LUAD 220412324 + 220412304 220412344 41 CCGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCGA CTGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCGA < 41bp 1 0.678269757447883 1 0.180775165557861 experiment 0.643460485104234 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220412324 chr2:220412305 stopgain 1.000 1 2 hm5C_associated_SNPs_28419 0 0 2 DDX3X POSTAR2 ENCODE chr2:220412296-220412352
64251 chr1 109806904 109806904 1 + G T LUAD 109806891 + 109806871 109806911 41 AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCA AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATTGTCTGCA < 41bp 1 0.0394575637519915 1 0.0518304705619812 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806891 chr1:109806904 nonsynonymous SNV 0.799 3 34 hm5C_associated_SNPs_28422 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806904 109806904 1 + G T LUAD 109806892 + 109806872 109806912 41 GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCAC GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATTGTCTGCAC < 41bp 1 0.200112423087898 1 0.59497994184494 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806892 chr1:109806904 nonsynonymous SNV 0.799 3 33 hm5C_associated_SNPs_28423 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806904 109806904 1 + G T LUAD 109806893 + 109806873 109806913 41 AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACC AGCAGAGGGCAACCTGGGCCCCCGGCTGCATTGTCTGCACC < 41bp 1 0.266463544291736 1 0.283645838499069 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806893 chr1:109806904 nonsynonymous SNV 0.799 3 32 hm5C_associated_SNPs_28424 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806904 109806904 1 + G T LUAD 109806894 + 109806874 109806914 41 GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCT GCAGAGGGCAACCTGGGCCCCCGGCTGCATTGTCTGCACCT < 41bp 1 0.132848455046493 1 0.362790733575821 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806894 chr1:109806904 nonsynonymous SNV 0.799 3 31 hm5C_associated_SNPs_28425 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806904 109806904 1 + G T LUAD 109806895 + 109806875 109806915 41 CAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCTG CAGAGGGCAACCTGGGCCCCCGGCTGCATTGTCTGCACCTG < 41bp 1 0.262404886238937 1 0.512665212154388 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806895 chr1:109806904 nonsynonymous SNV 0.799 3 30 hm5C_associated_SNPs_28426 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr3 126751397 126751397 1 + T A LUAD 126751389 + 126751369 126751409 41 CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA CTGGGCAAGGACTCACCCTCCAACAAGCAGCTCTACGCCAA < 41bp 1 0.476567223440151 1 0.582168161869049 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751389 chr3:126751397 nonsynonymous SNV 0.985 4 29 hm5C_associated_SNPs_28427 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:126751393-126751415
64251 chr19 58153284 58153284 1 + G T LUAD 58153303 + 58153283 58153323 41 GGAGAAAGACCTGTTGAGTGCAGTGAATGTAGCAAATCCTT GTAGAAAGACCTGTTGAGTGCAGTGAATGTAGCAAATCCTT < 41bp 1 0.371864636689053 1 0.211082547903061 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58153303 chr19:58153284 nonsynonymous SNV 0.960 3 2 hm5C_associated_SNPs_28429 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:58153284-58153305
64251 chr5 147819233 147819233 1 + G A LUAD 147819249 + 147819229 147819269 41 AGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGT AGCAAAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGT < 41bp 1 0.212952714847544 1 0.0729688405990601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819249 chr5:147819233 synonymous SNV . 0 5 hm5C_associated_SNPs_28430 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:147819209-147819236
64251 chr5 147819233 147819233 1 + G A LUAD 147819251 + 147819231 147819271 41 CAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTAT CAAAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTAT < 41bp 1 0.13640398859458 1 0.0367110669612885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819251 chr5:147819233 synonymous SNV . 0 3 hm5C_associated_SNPs_28431 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:147819209-147819236
64251 chr11 43411214 43411214 1 + G T LUAD 43411217 + 43411197 43411237 41 AACAGAAACAATTAGTTGCTCAAAAAATTCACATAGAAGAG AACAGAAACAATTAGTTTCTCAAAAAATTCACATAGAAGAG < 41bp 1 0.542908305024111 1 0.472005844116211 experiment 0.914183389951778 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43411217 chr11:43411214 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_28432 0 0 6 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:43411200-43411220
64251 chr11 125482978 125482978 1 + C G LUAD 125482974 + 125482954 125482994 41 CCAGTGAGGCCTACTCTTCTCCGTCCATTGTACTATCTGCC CCAGTGAGGCCTACTCTTCTCCGTGCATTGTACTATCTGCC < 41bp 1 0.239564499238156 1 0.636975646018982 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125482974 chr11:125482978 nonsynonymous SNV 0.953 4 25 hm5C_associated_SNPs_28433 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:125482942-125482992
64251 chr4 146576326 146576326 1 + G T LUAD 146576316 + 146576296 146576336 41 TAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTC TAGGTAATTCGTATTTCTGCCCGAAGTGGATAGGGGATCTC < 41bp 1 0.525843314390092 1 0.0773030519485474 experiment 0.948313371219817 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MMAA ENSG00000151611 CDS Human protein_coding chr4:146576316 chr4:146576326 stopgain 1.000 1 31 hm5C_associated_SNPs_28434 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:146576314-146576338
64251 chr1 158063219 158063219 1 + A T LUAD 158063221 + 158063201 158063241 41 CCTTGGTATTCTTCCTCTACCGGCGCCGCAAAGGCAGTGAG CCTTGGTATTCTTCCTCTTCCGGCGCCGCAAAGGCAGTGAG < 41bp 1 0.62724320996773 1 0.738637864589691 experiment 0.74551358006454 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIRREL ENSG00000183853 CDS Human protein_coding chr1:158063221 chr1:158063219 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_28435 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158063174-158063221
64251 chr18 34349242 34349242 1 + T A LUAD 34349255 + 34349235 34349275 41 TAGTTCCTGGACTATGGGAACTGATGACTCGCCCAATGTCA TAGTTCCAGGACTATGGGAACTGATGACTCGCCCAATGTCA < 41bp 1 0.137005685998653 1 0.0937724709510803 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FHOD3 ENSG00000134775 CDS Human protein_coding chr18:34349255 chr18:34349242 nonsynonymous SNV 0.999 3 8 hm5C_associated_SNPs_28436 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr18:34349241-34349242
64251 chr3 49060156 49060156 1 + A G LUAD 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCGCCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC < 41bp 1 0.381896278736435 1 0.15136581659317 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060156 nonsynonymous SNV 0.948 3 3 hm5C_associated_SNPs_28437 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:49060140-49060160
64251 chrX 73047023 73047023 1 - C G LUAD 73047007 - 73046987 73047027 41 CCATGTGAGATGATCCAAGACCAAAACAAGGCCCTAGACTG CCATCTGAGATGATCCAAGACCAAAACAAGGCCCTAGACTG < 41bp 1 0.266218289864704 1 0.100744396448135 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047007 chrX:73047023 . . 0 5 hm5C_associated_SNPs_28438 0 0 92 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047020-73047040
64251 chr10 75542186 75542186 1 + C T LUAD 75542205 + 75542185 75542225 41 GCCGCGAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTTT GTCGCGAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTTT < 41bp 1 0.746630140304924 1 0.83469021320343 experiment 0.506739719390152 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542205 chr10:75542186 nonsynonymous SNV 0.881 0 2 hm5C_associated_SNPs_28439 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:75542124-75542206
64251 chr17 30774031 30774031 1 + G A LUAD 30774035 + 30774015 30774055 41 GAGCATCCTGGAACTGGGATCTCTCCTGGCAAAGACTGGAC GAGCATCCTGGAACTGAGATCTCTCCTGGCAAAGACTGGAC < 41bp 1 0.260276487904819 1 0.337418258190155 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30774035 chr17:30774031 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_28441 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30773966-30774064
64251 chr19 49993753 49993753 1 + G T LUAD 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGGCTTTCCTCCTCAAGCGGATGAACACC < 41bp 1 0.637832201190245 1 0.28656804561615 experiment 0.724335597619509 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993753 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_28442 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr19 41135376 41135376 1 + C G LUAD 41135396 + 41135376 41135416 41 CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC GCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC < 41bp 1 0.607813042162557 1 0.890989303588867 experiment 0.784373915674886 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135396 chr19:41135376 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_28443 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41135363-41135406
64251 chr11 65055292 65055292 1 + G T LUAD 65055284 + 65055264 65055304 41 GACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG GACCTGATTGCTGTCATCAACCATGACCTGCCAGATGTCTG < 41bp 1 0.105409568711961 1 0.218507438898087 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65055284 chr11:65055292 nonsynonymous SNV 0.981 2 29 hm5C_associated_SNPs_28444 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65055282-65055311
64251 chr1 153617542 153617542 1 + C T LUAD 153617536 + 153617516 153617556 41 TTTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGT TTTTTTTTTTCCCCTTTGGGCCAGGTTGGGGTATGATAGGT < 41bp 1 0.16942993627309 1 0.458980143070221 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617536 chr1:153617542 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_28446 0 0 30 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr1 153617542 153617542 1 + C T LUAD 153617537 + 153617517 153617557 41 TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC TTTTTTTTTCCCCTTTGGGCCAGGTTGGGGTATGATAGGTC < 41bp 1 0.203520223537798 1 0.455877214670181 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617537 chr1:153617542 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_28447 0 0 30 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr2 216995607 216995607 1 + A G LUAD 216995625 + 216995605 216995645 41 CTATGGAAGTGATATAGTTCCTTTCTCTAAAGTGGATGAGG CTGTGGAAGTGATATAGTTCCTTTCTCTAAAGTGGATGAGG < 41bp 1 0.0636217888554179 1 0.0191124677658081 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995625 chr2:216995607 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_28449 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:216995595-216995636
64251 chr5 148743716 148743716 1 + G A LUAD 148743717 + 148743697 148743737 41 CGCCTCTGGTGGCACTATGGCATCAGCTTCCTGAGGCTGCA CGCCTCTGGTGGCACTATGACATCAGCTTCCTGAGGCTGCA < 41bp 1 0.54586203457499 1 0.205280154943466 experiment 0.90827593085002 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148743717 chr5:148743716 nonsynonymous SNV 0.995 4 20 hm5C_associated_SNPs_28451 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr5:148743700-148743720
64251 chr6 160183048 160183048 1 + C A LUAD 160183033 + 160183013 160183053 41 GGGGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTG GGGGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGACTGTG < 41bp 1 0.385191158240492 1 0.0656527578830719 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SOD2-OT1 ENSG00000112096;ENSG00000120437 UTR5 Human other chr6:160183033 chr6:160183048 . . 0 36 hm5C_associated_SNPs_28452 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:160183047-160183073
64251 chr6 160183048 160183048 1 + C A LUAD 160183034 + 160183014 160183054 41 GGGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTGG GGGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGACTGTGG < 41bp 1 0.370884016305362 1 0.16255247592926 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SOD2-OT1 ENSG00000112096;ENSG00000120437 UTR5 Human other chr6:160183034 chr6:160183048 . . 0 35 hm5C_associated_SNPs_28453 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:160183047-160183073
64251 chr6 160183048 160183048 1 + C A LUAD 160183035 + 160183015 160183055 41 GGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTGGG GGCGGGGCTACCTCAGGTCCCGCCCGCGGCAGGACTGTGGG < 41bp 1 0.670323527917538 1 0.20035108923912 experiment 0.659352944164924 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SOD2-OT1 ENSG00000112096;ENSG00000120437 UTR5 Human other chr6:160183035 chr6:160183048 . . 0 34 hm5C_associated_SNPs_28454 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:160183047-160183073
64251 chr6 160183048 160183048 1 + C A LUAD 160183037 + 160183017 160183057 41 CGGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTGGGCT CGGGGCTACCTCAGGTCCCGCCCGCGGCAGGACTGTGGGCT < 41bp 1 0.338896739198744 1 0.475143074989319 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SOD2-OT1 ENSG00000112096;ENSG00000120437 UTR5 Human other chr6:160183037 chr6:160183048 . . 0 32 hm5C_associated_SNPs_28455 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:160183047-160183073
64251 chr6 160183048 160183048 1 + C A LUAD 160183038 + 160183018 160183058 41 GGGGCTACCTCAGGTCCCGCCCGCGGCAGGCCTGTGGGCTG GGGGCTACCTCAGGTCCCGCCCGCGGCAGGACTGTGGGCTG < 41bp 1 0.76259317756905 1 0.708840012550354 experiment 0.4748136448619 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SOD2-OT1 ENSG00000112096;ENSG00000120437 UTR5 Human other chr6:160183038 chr6:160183048 . . 0 31 hm5C_associated_SNPs_28456 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:160183047-160183073
64251 chr19 57910682 57910682 1 + G T LUAD 57910662 + 57910642 57910682 41 AGTTCACACCGGAGAAAGACCTTATAAGTGCAATGATTGTG AGTTCACACCGGAGAAAGACCTTATAAGTGCAATGATTGTT < 41bp 1 0.092878868794211 1 0.0895889103412628 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF548 ENSG00000188785 CDS Human protein_coding chr19:57910662 chr19:57910682 nonsynonymous SNV 0.997 3 41 hm5C_associated_SNPs_28457 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr19:57910655-57910688
64251 chr17 39978051 39978051 1 + C A LUAD 39978062 + 39978042 39978082 41 CAAGGATGGCGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT CAAGGATGGAGAGGTCCCTCCGGAGGAGGTGGGTGAAGGTT < 41bp 1 0.550169301807234 1 0.787547945976257 experiment 0.899661396385532 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39978062 chr17:39978051 synonymous SNV . 0 10 hm5C_associated_SNPs_28463 0 0 4 BUD13 POSTAR2 ENCODE chr17:39978027-39978066
64251 chr5 167943881 167943881 1 + C G LUAD 167943878 + 167943858 167943898 41 CATAACCGGTTGAATGACTACATCTTCTCCTTTGACAAAAT CATAACCGGTTGAATGACTACATGTTCTCCTTTGACAAAAT < 41bp 1 0.298229836589709 1 0.063340961933136 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943878 chr5:167943881 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_28464 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167943844-167943892
64251 chr1 235600748 235600748 1 + A T LUAD 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTTTCGCCAGCATTGGC < 41bp 1 0.611078779167061 1 0.0917857885360718 experiment 0.777842441665877 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600748 nonsynonymous SNV 0.003 4 27 hm5C_associated_SNPs_28465 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr4 57891066 57891066 1 + G T LUAD 57891056 + 57891036 57891076 41 CTTTTTTTTTTAAAAGGTATCGGCTAACAAGGGTGAAATTG CTTTTTTTTTTAAAAGGTATCGGCTAACAATGGTGAAATTG < 41bp 1 0.362175025144119 1 0.418382048606873 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57891056 chr4:57891066 nonsynonymous SNV 0.998 0 31 hm5C_associated_SNPs_28466 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:57891059-57891097
64251 chr22 38046636 38046636 1 + C T LUAD 38046649 + 38046629 38046669 41 CTTCCGTCCACTGCCGTGCCCACCCCAGCCACCACCCCGGC CTTCCGTTCACTGCCGTGCCCACCCCAGCCACCACCCCGGC < 41bp 1 0.33079988068799 1 0.0234816670417786 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38046649 chr22:38046636 nonsynonymous SNV 0.001 0 8 hm5C_associated_SNPs_28467 0 0 3 DDX24 POSTAR2 ENCODE chr22:38046548-38046647
64251 chrX 54838629 54838629 1 + C A LUAD 54838641 + 54838621 54838661 41 AGAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCC AGAATGACAACTTGTACATTCTTCTCAGCACCTTAGAGCCC < 41bp 1 0.124250139790139 1 0.0473296940326691 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54838641 chrX:54838629 nonsynonymous SNV 0.905 0 9 hm5C_associated_SNPs_28472 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:54838607-54838635
64251 chr5 149206254 149206254 1 + G T LUAD 149206241 + 149206221 149206261 41 CCCTCCTCACTCCAGATTGACAGTGAGAATGAGGCCCTCCT CCCTCCTCACTCCAGATTGACAGTGAGAATGAGTCCCTCCT < 41bp 1 0.250907135809206 1 0.130060762166977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149206241 chr5:149206254 nonsynonymous SNV 0.998 4 34 hm5C_associated_SNPs_28474 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149206245-149206269
64251 chr11 61404715 61404715 1 + C G LUAD 61404700 + 61404680 61404720 41 ATGCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCA ATGCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTGATCCA < 41bp 1 0.462580498626999 1 0.805577874183655 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404700 chr11:61404715 . . 0 36 hm5C_associated_SNPs_28475 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr11 61404715 61404715 1 + C G LUAD 61404702 + 61404682 61404722 41 GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGC GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTGATCCAGC < 41bp 1 0.166991154115404 1 0.186785787343979 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404702 chr11:61404715 . . 0 34 hm5C_associated_SNPs_28476 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr6 42561937 42561937 1 + A T LUAD 42561936 + 42561916 42561956 41 ATTTTTTTCCAAGATGACAACATCAGGAGGTGGAGGTTTCT ATTTTTTTCCAAGATGACAACTTCAGGAGGTGGAGGTTTCT < 41bp 1 0.167420558811297 1 0.593618035316467 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBR2 ENSG00000024048 CDS Human protein_coding chr6:42561936 chr6:42561937 synonymous SNV . 0 22 hm5C_associated_SNPs_28477 0 0 11 BUD13 POSTAR2 ENCODE chr6:42561920-42561971
64251 chr5 154179525 154179525 1 + G C LUAD 154179534 + 154179514 154179554 41 AGGGCCTGTCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC AGGGCCTGTCTCCCAGCCTGCCTGACCTGGATTCTGAGAAC < 41bp 1 0.223487172651887 1 0.046910434961319 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179534 chr5:154179525 nonsynonymous SNV 0.998 2 12 hm5C_associated_SNPs_28478 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154179481-154179589
64251 chr10 95660993 95660993 1 + G T LUAD 95660981 + 95660961 95661001 41 CTGTATTAGGAGAGTGGAGTCTGCCTTACTGTGGGTTGGAC CTGTATTAGGAGAGTGGAGTCTGCCTTACTGTTGGTTGGAC < 41bp 1 0.535298573330731 1 0.310320854187012 experiment 0.929402853338538 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660981 chr10:95660993 nonsynonymous SNV 0.987 4 33 hm5C_associated_SNPs_28479 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:95660989-95661002
64251 chr3 170110112 170110112 1 + C G LUAD 170110100 + 170110080 170110120 41 GAGGCCGATAGGCAAGAACTCCAAGATGAACTCAGACAGGA GAGGCCGATAGGCAAGAACTCCAAGATGAACTGAGACAGGA < 41bp 1 0.459722361207837 1 0.422502368688583 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110100 chr3:170110112 synonymous SNV . 0 33 hm5C_associated_SNPs_28480 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr3 170110112 170110112 1 + C G LUAD 170110110 + 170110090 170110130 41 GGCAAGAACTCCAAGATGAACTCAGACAGGAACGGGAAGCA GGCAAGAACTCCAAGATGAACTGAGACAGGAACGGGAAGCA < 41bp 1 0.649070908955992 1 0.439980179071426 experiment 0.701858182088015 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110110 chr3:170110112 synonymous SNV . 0 23 hm5C_associated_SNPs_28481 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr2 238005469 238005469 1 + A T LUAD 238005475 + 238005455 238005495 41 TTGAATTTAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAA TTGAATTTAGTTGCTGGGGCCCTGGATGTTTCCTTTAACAA < 41bp 1 0.104739782241984 1 0.195703327655792 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COPS8 ENSG00000198612 CDS Human protein_coding chr2:238005475 chr2:238005469 synonymous SNV . 0 15 hm5C_associated_SNPs_28482 0 0 2 PRPF8 POSTAR2 ENCODE chr2:238005461-238005529
64251 chr19 14512314 14512314 1 + G C LUAD 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATCATCAGGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.275753446702235 1 0.0515044629573822 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512314 nonsynonymous SNV 0.002 1 15 hm5C_associated_SNPs_28483 0 0 1 SND1 POSTAR2 ENCODE chr19:14512310-14512376
64251 chr1 109643148 109643148 1 + G T LUAD 109643144 + 109643124 109643164 41 AGGTCCCGGAGCTGGCCCTGCGGGGCCCGGCGCTCAGAAGT AGGTCCCGGAGCTGGCCCTGCGGGTCCCGGCGCTCAGAAGT < 41bp 1 0.73296973707266 1 0.813976287841797 experiment 0.534060525854679 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643144 chr1:109643148 . . 0 25 hm5C_associated_SNPs_28484 0 0 55 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:109643140-109643160
64251 chr1 109643148 109643148 1 + G T LUAD 109643149 + 109643129 109643169 41 CCGGAGCTGGCCCTGCGGGGCCCGGCGCTCAGAAGTGATGA CCGGAGCTGGCCCTGCGGGTCCCGGCGCTCAGAAGTGATGA < 41bp 1 0.554942641315839 1 0.110885202884674 experiment 0.890114717368322 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643149 chr1:109643148 . . 0 20 hm5C_associated_SNPs_28485 0 0 55 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:109643140-109643160
64251 chr1 109643148 109643148 1 + G T LUAD 109643150 + 109643130 109643170 41 CGGAGCTGGCCCTGCGGGGCCCGGCGCTCAGAAGTGATGAA CGGAGCTGGCCCTGCGGGTCCCGGCGCTCAGAAGTGATGAA < 41bp 1 0.488490427884284 1 0.326938807964325 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643150 chr1:109643148 . . 0 19 hm5C_associated_SNPs_28486 0 0 55 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:109643140-109643160
64251 chr1 109643148 109643148 1 + G T LUAD 109643154 + 109643134 109643174 41 GCTGGCCCTGCGGGGCCCGGCGCTCAGAAGTGATGAATTGA GCTGGCCCTGCGGGTCCCGGCGCTCAGAAGTGATGAATTGA < 41bp 1 0.2511147147205 1 0.259146451950073 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643154 chr1:109643148 . . 0 15 hm5C_associated_SNPs_28487 0 0 55 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:109643140-109643160
64251 chr1 109643148 109643148 1 + G T LUAD 109643156 + 109643136 109643176 41 TGGCCCTGCGGGGCCCGGCGCTCAGAAGTGATGAATTGATC TGGCCCTGCGGGTCCCGGCGCTCAGAAGTGATGAATTGATC < 41bp 1 0.459126715436587 1 0.182366460561752 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643156 chr1:109643148 . . 0 13 hm5C_associated_SNPs_28488 0 0 55 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:109643140-109643160
64251 chr3 66431236 66431236 1 - A G LUAD 66431223 - 66431203 66431243 41 TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT TGGACTGCTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT < 41bp 1 0.190507149032524 1 0.188139915466309 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431223 chr3:66431236 synonymous SNV . 0 8 hm5C_associated_SNPs_28489 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:66431223-66431254
64251 chr6 44107279 44107279 1 + G T LUAD 44107298 + 44107278 44107318 41 TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG TTCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG < 41bp 1 0.347662266708723 1 0.145701169967651 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107298 chr6:44107279 synonymous SNV . 0 2 hm5C_associated_SNPs_28491 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:44107247-44107283
64251 chr6 1391291 1391291 1 + G C LUAD 1391304 + 1391284 1391324 41 CACTCCAGCATGTCCTCCTACTCGCTGGAGCAGAGCTACTT CACTCCACCATGTCCTCCTACTCGCTGGAGCAGAGCTACTT < 41bp 1 0.391617936675145 1 0.284998804330826 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1391304 chr6:1391291 nonsynonymous SNV 0.992 2 8 hm5C_associated_SNPs_28492 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:1391269-1391291
64251 chr9 127561676 127561676 1 + A T LUAD 127561684 + 127561664 127561704 41 TGCTGGGCATCAAGAAGGAGCTGTCCCGCCTGGGCCTCCAG TGCTGGGCATCATGAAGGAGCTGTCCCGCCTGGGCCTCCAG < 41bp 1 0.0958195772772045 1 0.105729818344116 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OLFML2A ENSG00000185585 CDS Human protein_coding chr9:127561684 chr9:127561676 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_28496 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:127561647-127561677
64251 chr4 48384741 48384741 1 + A C LUAD 48384732 + 48384712 48384752 41 TATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCAC TATGCATCATGCAGTATACCCTGCTGTTACCAGGTTTTCAC < 41bp 1 0.650838144254101 1 0.0513534545898438 experiment 0.698323711491798 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384732 chr4:48384741 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_28498 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:48384722-48384757
64251 chr22 50277426 50277426 1 + G C LUAD 50277446 + 50277426 50277466 41 GAATGGACTTTAAAAGCGAGCAGGAGGACATGAAGCAGACA CAATGGACTTTAAAAGCGAGCAGGAGGACATGAAGCAGACA < 41bp 1 0.721236129285944 1 0.809264004230499 experiment 0.557527741428112 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50277446 chr22:50277426 nonsynonymous SNV 0.599 0 1 hm5C_associated_SNPs_28499 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr22:50277417-50277441
64251 chrX 23685884 23685884 1 + G T LUAD 23685882 + 23685862 23685902 41 GTGTACCCGGGAGAGGCATCCCGGGTATCGGTCGCCGACCA GTGTACCCGGGAGAGGCATCCCTGGTATCGGTCGCCGACCA < 41bp 1 0.591912993927151 1 0.313383519649506 experiment 0.816174012145698 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685882 chrX:23685884 nonsynonymous SNV 0.849 2 23 hm5C_associated_SNPs_28500 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:23685858-23685896
64251 chr4 41652437 41652437 1 + G C LUAD 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGACGGGAAAGTCAGTGTGAATGGACAGACGGT < 41bp 1 0.356869877578743 1 0.383950710296631 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652437 nonsynonymous SNV 0.835 4 34 hm5C_associated_SNPs_28501 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr4:41652431-41652452
64251 chr7 150840470 150840470 1 + G A LUSC 150840477 + 150840457 150840497 41 AGTATGAACAGAAGCTCTTCCTGGCCCCACTGCCAAGCTCA AGTATGAACAGAAACTCTTCCTGGCCCCACTGCCAAGCTCA < 41bp 1 0.308845139857643 1 0.133706599473953 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150840477 chr7:150840470 synonymous SNV . 0 14 hm5C_associated_SNPs_28502 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:150840438-150840490
64251 chr2 232576121 232576121 1 + G T LUSC 232576110 + 232576090 232576130 41 GGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTG GGCAGAAAATGGAAGAGACGCCCCTGCTAACTGGAATGCTG < 41bp 1 0.246879195223357 1 0.0528959929943085 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576110 chr2:232576121 nonsynonymous SNV 0.995 3 32 hm5C_associated_SNPs_28503 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:232576118-232576174
64251 chr2 232576121 232576121 1 + G T LUSC 232576128 + 232576108 232576148 41 CGCCCCTGCTAACGGGAATGCTGTGAGTGTCTGCTTTGCTC CGCCCCTGCTAACTGGAATGCTGTGAGTGTCTGCTTTGCTC < 41bp 1 0.497747715388458 1 0.132533133029938 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576128 chr2:232576121 nonsynonymous SNV 0.995 3 14 hm5C_associated_SNPs_28504 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:232576118-232576174
64251 chr8 77620157 77620157 1 + G T LUSC 77620172 + 77620152 77620192 41 TTGAAGTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG TTGAATTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG < 41bp 1 0.0793398528978891 1 0.0610237717628479 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77620172 chr8:77620157 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_28505 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:77620156-77620172
64251 chr21 34925003 34925003 1 + A G LUSC 34925019 + 34924999 34925039 41 CCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGA CCCAGCAATGCCACCGTTGCCACCTGAGGAGCCACCAATGA < 41bp 1 0.627501106378248 1 0.422674149274826 experiment 0.744997787243505 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925019 chr21:34925003 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_28506 0 0 27 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:34924900-34925020
64251 chr2 198571408 198571408 1 + A C LUSC 198571398 + 198571378 198571418 41 CCTTCTGAGACCTACCCAGCCTTCTGCACTACCTGCTTCCC CCTTCTGAGACCTACCCAGCCTTCTGCACTCCCTGCTTCCC < 41bp 1 0.226298621122623 1 0.0265955924987793 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571398 chr2:198571408 nonsynonymous SNV 0.664 0 31 hm5C_associated_SNPs_28507 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:198571363-198571414
64251 chr20 19981329 19981329 1 + A G LUSC 19981314 + 19981294 19981334 41 GTTGCACAGGAAAGACCCTCCTTGTGAGACCTTACATCACC GTTGCACAGGAAAGACCCTCCTTGTGAGACCTTACGTCACC < 41bp 1 0.419327077388549 1 0.298429429531097 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIN2 ENSG00000132669 CDS Human protein_coding chr20:19981314 chr20:19981329 nonsynonymous SNV 0.137 0 36 hm5C_associated_SNPs_28508 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr20:19981319-19981338
64251 chr20 37580939 37580939 1 + G A LUSC 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT TGAGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT < 41bp 1 0.31632044541041 1 0.0780228674411774 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580939 nonsynonymous SNV 0.844 0 3 hm5C_associated_SNPs_28509 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr1 874711 874711 1 + C G LUSC 874694 + 874674 874714 41 GGAGCTGGGGCCCAGCATGGCCCCGGAGGACCATTACCGCC GGAGCTGGGGCCCAGCATGGCCCCGGAGGACCATTACGGCC < 41bp 1 0.643739838872761 1 0.171914786100388 experiment 0.712520322254478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:874694 chr1:874711 nonsynonymous SNV 0.194 1 38 hm5C_associated_SNPs_28510 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:874706-874727
64251 chr1 874711 874711 1 + C G LUSC 874695 + 874675 874715 41 GAGCTGGGGCCCAGCATGGCCCCGGAGGACCATTACCGCCG GAGCTGGGGCCCAGCATGGCCCCGGAGGACCATTACGGCCG < 41bp 1 0.749673018641553 1 0.441164463758469 experiment 0.500653962716895 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:874695 chr1:874711 nonsynonymous SNV 0.194 1 37 hm5C_associated_SNPs_28511 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:874706-874727
64251 chr7 73944172 73944172 1 + G A LUSC 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATCCCCTTCAAGCACCCCTGCACTT < 41bp 1 0.0238269428424223 1 0.155773311853409 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944172 nonsynonymous SNV 0.996 3 30 hm5C_associated_SNPs_28513 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr19 11096052 11096052 1 + C T LUSC 11096032 + 11096012 11096052 41 ATGGGGATGCGGTCAGGGGGCCATGCTGGGATGGGGCCCCC ATGGGGATGCGGTCAGGGGGCCATGCTGGGATGGGGCCCCT < 41bp 1 0.254540750603923 1 0.385194301605225 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11096032 chr19:11096052 nonsynonymous SNV 0.808 5 41 hm5C_associated_SNPs_28515 1 0 5 FMR1 POSTAR2 ENCODE chr19:11096031-11096053
64251 chr17 37359337 37359337 1 + G A LUSC 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTAAA < 41bp 1 0.361846223013669 1 0.0980159640312195 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359337 nonsynonymous SNV 0.444 2 39 hm5C_associated_SNPs_28516 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359337 37359337 1 + G A LUSC 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTAAATCT < 41bp 1 0.477728610604511 1 0.143285661935806 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359337 nonsynonymous SNV 0.444 2 36 hm5C_associated_SNPs_28517 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359337 37359337 1 + G A LUSC 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCTGCTCAGAAGATACCGTAAATCTAAGAAGATCGA < 41bp 1 0.341357975422268 1 0.190246552228928 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359337 nonsynonymous SNV 0.444 2 25 hm5C_associated_SNPs_28518 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359337 37359337 1 + G A LUSC 37359334 + 37359314 37359354 41 GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGAT GCCGGCTGCTCAGAAGATACCGTAAATCTAAGAAGATCGAT < 41bp 1 0.552293648982667 1 0.351287126541138 experiment 0.895412702034667 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359334 chr17:37359337 nonsynonymous SNV 0.444 2 24 hm5C_associated_SNPs_28519 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr19 52714673 52714673 1 + G A LUSC 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CACACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.418916991265036 1 0.0607351064682007 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714673 nonsynonymous SNV 0.985 4 2 hm5C_associated_SNPs_28520 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr10 121677443 121677443 1 + A T LUSC 121677432 + 121677412 121677452 41 CTAGATATTTTATTTTATAACAGCCCCACCTACTGTCAGAC CTAGATATTTTATTTTATAACAGCCCCACCTTCTGTCAGAC < 41bp 1 0.240460484843486 1 0.190818548202515 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121677432 chr10:121677443 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_28521 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:121677415-121677446
64251 chrX 54836517 54836517 1 + A C LUSC 54836504 + 54836484 54836524 41 GGTCAGCCATGTGGCTGATACAAAGGTCAATACAAAGGCTC GGTCAGCCATGTGGCTGATACAAAGGTCAATACCAAGGCTC < 41bp 1 0.790907188175064 1 0.534909069538116 experiment 0.418185623649872 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836504 chrX:54836517 synonymous SNV . 0 34 hm5C_associated_SNPs_28522 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:54836503-54836541
64251 chr16 83932989 83932989 1 + G C LUSC 83932994 + 83932974 83933014 41 CGGTGGGCTGGCCGAGACGGCCCAGCGGGCCGAACTGCTGG CGGTGGGCTGGCCGACACGGCCCAGCGGGCCGAACTGCTGG < 41bp 1 0.427683916470517 1 0.194747805595398 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MLYCD ENSG00000103150 CDS Human protein_coding chr16:83932994 chr16:83932989 nonsynonymous SNV 0.970 1 16 hm5C_associated_SNPs_28525 0 0 2 FASTKD2 POSTAR2 ENCODE chr16:83932959-83933061
64251 chr16 83932989 83932989 1 + G C LUSC 83932995 + 83932975 83933015 41 GGTGGGCTGGCCGAGACGGCCCAGCGGGCCGAACTGCTGGG GGTGGGCTGGCCGACACGGCCCAGCGGGCCGAACTGCTGGG < 41bp 1 0.498599044046116 1 0.318159699440002 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MLYCD ENSG00000103150 CDS Human protein_coding chr16:83932995 chr16:83932989 nonsynonymous SNV 0.970 1 15 hm5C_associated_SNPs_28526 0 0 2 FASTKD2 POSTAR2 ENCODE chr16:83932959-83933061
64251 chr16 83932989 83932989 1 + G C LUSC 83932999 + 83932979 83933019 41 GGCTGGCCGAGACGGCCCAGCGGGCCGAACTGCTGGGCCGC GGCTGGCCGACACGGCCCAGCGGGCCGAACTGCTGGGCCGC < 41bp 1 0.772759572229873 1 0.850524663925171 experiment 0.454480855540254 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MLYCD ENSG00000103150 CDS Human protein_coding chr16:83932999 chr16:83932989 nonsynonymous SNV 0.970 1 11 hm5C_associated_SNPs_28527 0 0 2 FASTKD2 POSTAR2 ENCODE chr16:83932959-83933061
64251 chr19 50881892 50881892 1 + G A LUSC 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG CTCAGCCTCTAGGCCTGGGGCTTCCCCTGGTGGATCTGAGG < 41bp 1 0.0793921183781115 1 0.0859507024288177 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881892 nonsynonymous SNV 0.106 1 11 hm5C_associated_SNPs_28528 0 0 5 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr12 70760802 70760802 1 + T C LUSC 70760809 + 70760789 70760829 41 CTGAGTCCAACTCTAGGGCGCTGCTGCACAGCGACGAGCAC CTGAGTCCAACTCCAGGGCGCTGCTGCACAGCGACGAGCAC < 41bp 1 0.347286094408183 1 0.0375682711601257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KCNMB4 ENSG00000135643 CDS Human protein_coding chr12:70760809 chr12:70760802 synonymous SNV . 0 14 hm5C_associated_SNPs_28529 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:70760796-70760819
64251 chr13 115090576 115090576 1 + G A LUSC 115090577 + 115090557 115090597 41 CCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC CCAGTGTCTCCAGAGCTTCACAAACCCGGCCCACCACTATC < 41bp 1 0.278200244431913 1 0.142058551311493 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090577 chr13:115090576 nonsynonymous SNV 0.990 3 20 hm5C_associated_SNPs_28530 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr19 48259067 48259067 1 + C G LUSC 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GAGCTCGGAGCTGACAGACTCGCTGAGGACCCTGAAGGTGC < 41bp 1 0.497268379499347 1 0.119084984064102 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259067 synonymous SNV . 0 25 hm5C_associated_SNPs_28531 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr3 184040733 184040733 1 + G T LUSC 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CCAGAGGGATTGCCACATATCAGTGACGTGGTTCTGGACAA < 41bp 1 0.687058142824294 1 0.332542181015015 experiment 0.625883714351412 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040733 synonymous SNV . 0 33 hm5C_associated_SNPs_28532 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chr16 67918045 67918045 1 + C T LUSC 67918061 + 67918041 67918081 41 GCCTCCCTTAGCTGCTAAGCCTGCCTTGCCCAGGGGTGGGA GCCTTCCTTAGCTGCTAAGCCTGCCTTGCCCAGGGGTGGGA < 41bp 1 0.439431358448748 1 0.0885667502880096 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67918061 chr16:67918045 synonymous SNV . 0 5 hm5C_associated_SNPs_28533 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67918015-67918053
64251 chr11 810332 810332 1 + A T LUSC 810330 + 810310 810350 41 ATCTTGGACAGCGTGGGTATCGAGGCGGACGACGACCGGCT ATCTTGGACAGCGTGGGTATCGTGGCGGACGACGACCGGCT < 41bp 1 0.788453679703792 1 0.500932216644287 experiment 0.423092640592417 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPLP2 ENSG00000177600 CDS Human protein_coding chr11:810330 chr11:810332 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_28535 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:810231-810352
64251 chr11 810332 810332 1 + A T LUSC 810346 + 810326 810366 41 GTATCGAGGCGGACGACGACCGGCTCAACAAGGTAGCGGCC GTATCGTGGCGGACGACGACCGGCTCAACAAGGTAGCGGCC < 41bp 1 0.693284794504407 1 0.445269465446472 experiment 0.613430410991185 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPLP2 ENSG00000177600 CDS Human protein_coding chr11:810346 chr11:810332 nonsynonymous SNV 0.997 4 7 hm5C_associated_SNPs_28536 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:810231-810352
64251 chr9 140611489 140611489 1 + G T LUSC 140611483 + 140611463 140611503 41 AGGGGCTGGCAAAGGCAGGACTCCAAGCGCTTTTCCCCAGA AGGGGCTGGCAAAGGCAGGACTCCAATCGCTTTTCCCCAGA < 41bp 1 0.793625709240222 1 0.955989718437195 experiment 0.412748581519555 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140611483 chr9:140611489 nonsynonymous SNV 0.540 2 27 hm5C_associated_SNPs_28537 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr9:140611478-140611494
64251 chr16 31927618 31927618 1 + C G LUSC 31927630 + 31927610 31927650 41 AAGACATACTGGAGAGAGACCCTACAAATGTGATGAATGTG AAGACATAGTGGAGAGAGACCCTACAAATGTGATGAATGTG < 41bp 1 0.0364209738148508 1 0.20202225446701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927630 chr16:31927618 nonsynonymous SNV 0.185 3 9 hm5C_associated_SNPs_28538 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:31927577-31927633
64251 chr15 52353627 52353627 1 + C G LUSC 52353617 + 52353597 52353637 41 ATGGATGAGCCAATTTCAAGCCATCCTTTTCATATTGAAGA ATGGATGAGCCAATTTCAAGCCATCCTTTTGATATTGAAGA < 41bp 1 0.0340774388393299 1 0.201988518238068 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52353617 chr15:52353627 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_28539 0 0 5 IGF2BP1 POSTAR2 ENCODE chr15:52353521-52353634
64251 chr16 29819136 29819136 1 + A T LUSC 29819141 + 29819121 29819161 41 TGCTCCCACTGTGGCAAGAGCTTCTCCCGGTGTGCACGGGG TGCTCCCACTGTGGCTAGAGCTTCTCCCGGTGTGCACGGGG < 41bp 1 0.133227273550634 1 0.0931947231292725 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29819141 chr16:29819136 stopgain 1.000 0 16 hm5C_associated_SNPs_28540 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:29819134-29819158
64251 chr3 66430866 66430866 1 - C T LUSC 66430873 - 66430853 66430893 41 GCAAGGTTGTATCACCCGGACTCCACAGAGCTACAGCCTGC GCAAGGTTGTATCACCCGGACTCCACAAAGCTACAGCCTGC < 41bp 1 0.534726152136138 1 0.641265511512756 experiment 0.930547695727724 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430873 chr3:66430866 nonsynonymous SNV 0.014 0 28 hm5C_associated_SNPs_28541 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:66430832-66430884
64251 chr1 876646 876646 1 + G C LUSC 876631 + 876611 876651 41 GTCAGCGTCGGAAGCAGGGCCTGGCTCAGCACCGGGAGGGC GTCAGCGTCGGAAGCAGGGCCTGGCTCAGCACCGGCAGGGC < 41bp 1 0.717141212608272 1 0.369943261146545 experiment 0.565717574783457 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:876631 chr1:876646 nonsynonymous SNV 0.180 0 36 hm5C_associated_SNPs_28542 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:876621-876667
64251 chr19 37853740 37853740 1 + A T LUSC 37853759 + 37853739 37853779 41 CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA CTGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA < 41bp 1 0.345474359052617 1 0.0886876881122589 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853759 chr19:37853740 nonsynonymous SNV 0.965 0 2 hm5C_associated_SNPs_28543 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr5 140076610 140076610 1 + A G LUSC 140076598 + 140076578 140076618 41 AACAAGCAGGCCCTGGAGGGCCTGGGAGACCTAAAGCTGCT AACAAGCAGGCCCTGGAGGGCCTGGGAGACCTGAAGCTGCT < 41bp 1 0.231922501850813 1 0.31829571723938 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HARS2 ENSG00000112855 CDS Human protein_coding chr5:140076598 chr5:140076610 synonymous SNV . 0 33 hm5C_associated_SNPs_28544 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:140076593-140076631
64251 chrX 107814687 107814687 1 + G T LUSC 107814691 + 107814671 107814711 41 GTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATT GTTTTCCTGGTTTACATGGTCCTCCAGTAAGTTATAAAATT < 41bp 1 0.0121185557526849 1 0.0662120878696442 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107814691 chrX:107814687 nonsynonymous SNV 0.999 1 17 hm5C_associated_SNPs_28545 0 0 6 BUD13 POSTAR2 ENCODE chrX:107814650-107814698
64251 chr19 35749909 35749909 1 + G T LUSC 35749925 + 35749905 35749945 41 CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC CCGTTGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC < 41bp 1 0.745986403170585 1 0.876098155975342 experiment 0.50802719365883 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35749925 chr19:35749909 synonymous SNV . 0 5 hm5C_associated_SNPs_28546 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:35749894-35749915
64251 chr10 60580165 60580165 1 + G T LUSC 60580149 + 60580129 60580169 41 ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGTATCT < 41bp 1 0.077619906460706 1 0.0821800231933594 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60580149 chr10:60580165 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_28547 0 0 6 HNRNPD POSTAR2 GSE52971,GSM1279667 chr10:60580120-60580200
64251 chr11 118369096 118369096 1 + C T LUSC 118369113 + 118369093 118369133 41 ATTCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTCA ATTTTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTCA < 41bp 1 0.0217708548254592 1 0.178998112678528 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118369113 chr11:118369096 synonymous SNV . 0 4 hm5C_associated_SNPs_28548 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:118369071-118369101
64251 chr1 120269489 120269489 1 + G A LUSC 120269481 + 120269461 120269501 41 TCTATCCTTGCAGGCAGATTCCCCAGGCGACGGCTTCGATG TCTATCCTTGCAGGCAGATTCCCCAGGCAACGGCTTCGATG < 41bp 1 0.788182882212579 1 0.0893608629703522 experiment 0.423634235574841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120269481 chr1:120269489 synonymous SNV . 0 29 hm5C_associated_SNPs_28550 1 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:120269480-120269500
64251 chr3 182597368 182597368 1 + A G LUSC 182597357 + 182597337 182597377 41 TATCTCTTGCACTCAGGGAGCATGAAAAACTATTTATGGAA TATCTCTTGCACTCAGGGAGCATGAAAAACTGTTTATGGAA < 41bp 1 0.479486626317193 1 0.59481143951416 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP11B ENSG00000058063 CDS Human protein_coding chr3:182597357 chr3:182597368 synonymous SNV . 0 32 hm5C_associated_SNPs_28557 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:182597360-182597380
64251 chr17 27844513 27844513 1 + G T LUSC 27844497 + 27844477 27844517 41 AATGAAAACCAGAGTACCCCCAAAAAAGAAAAACAGGAGTG AATGAAAACCAGAGTACCCCCAAAAAAGAAAAACAGTAGTG < 41bp 1 0.269542425275464 1 0.584478259086609 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK1 ENSG00000160551 CDS Human protein_coding chr17:27844497 chr17:27844513 stopgain 0.991 1 37 hm5C_associated_SNPs_28559 0 0 2 GRWD1 POSTAR2 ENCODE chr17:27844471-27844550
64251 chr19 49377950 49377950 1 + G T LUSC 49377943 + 49377923 49377963 41 ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAG ACTTCAGGGGCTGGGGATATCGACCTGTAAAAGAGACAGAG < 41bp 1 0.626733038193648 1 0.72926664352417 experiment 0.746533923612704 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377943 chr19:49377950 nonsynonymous SNV 0.001 1 28 hm5C_associated_SNPs_28560 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49377927-49377965
64251 chr19 49377950 49377950 1 + G T LUSC 49377947 + 49377927 49377967 41 CAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAGGAAG CAGGGGCTGGGGATATCGACCTGTAAAAGAGACAGAGGAAG < 41bp 1 0.545380142530691 1 0.776692092418671 experiment 0.909239714938618 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377947 chr19:49377950 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_28561 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49377927-49377965
64251 chr1 150325414 150325414 1 + G T LUSC 150325400 + 150325380 150325420 41 GCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTG GCATTTCAAAAAGCATGGGGCTGAACACTACTGGTACCTTG < 41bp 1 0.628712920781119 1 0.115493476390839 experiment 0.742574158437763 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150325400 chr1:150325414 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_28562 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150325341-150325471
64251 chr3 9515061 9515061 1 + C A LUSC 9515077 + 9515057 9515097 41 TGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTT TGCCAATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTT < 41bp 1 0.359096801956848 1 0.0577958822250366 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515077 chr3:9515061 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_28563 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:9515052-9515069
64251 chr19 11145695 11145695 1 + G T LUSC 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCGTAGGTGGAGCGGCTGAC < 41bp 1 0.526385885576366 1 0.286846339702606 experiment 0.947228228847269 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145695 stopgain 0.731 1 25 hm5C_associated_SNPs_28564 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145695 11145695 1 + G T LUSC 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGTAGGTGGAGCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.400826716540971 1 0.453097492456436 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145695 stopgain 0.731 1 12 hm5C_associated_SNPs_28565 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145695 11145695 1 + G T LUSC 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGTAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.199894163868909 1 0.321041285991669 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145695 stopgain 0.731 1 9 hm5C_associated_SNPs_28566 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 36579962 36579962 1 + C T LUSC 36579965 + 36579945 36579985 41 AGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCAT AGAGACATCCAGATGATTAGCTGTGGGGCTGACAAGAGCAT < 41bp 1 0.334736211784795 1 0.216285228729248 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36579965 chr19:36579962 synonymous SNV . 0 18 hm5C_associated_SNPs_28567 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:36579948-36579970
64251 chr5 14280498 14280498 1 + A T LUSC 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GTCAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT < 41bp 1 0.298771650135497 1 0.10762882232666 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280498 synonymous SNV . 0 2 hm5C_associated_SNPs_28568 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:14280476-14280502
64251 chr11 120352074 120352074 1 + T C LUSC 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCCATGACAGGCATCCCTGCTGCGGAATCCACCCACC < 41bp 1 0.566604554340801 1 0.21507403254509 experiment 0.866790891318398 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352074 nonsynonymous SNV 0.046 0 27 hm5C_associated_SNPs_28569 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:120352031-120352083
64251 chr11 120352075 120352075 1 + G T LUSC 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCCATGACAGGCATCCCTGCTGTTGAATCCACCCACC < 41bp 1 0.6022428021107 1 0.142653197050095 experiment 0.795514395778601 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352075 synonymous SNV . 0 28 hm5C_associated_SNPs_28570 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:120352031-120352083
64251 chr19 50385600 50385600 1 + C T LUSC 50385593 + 50385573 50385613 41 GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGC GCAGCCACAGCCTGAGGGAGCCGCCTCTGACCTTCCCCCGC < 41bp 1 0.296552434695099 1 0.167969614267349 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385593 chr19:50385600 synonymous SNV . 0 28 hm5C_associated_SNPs_28571 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50385600 50385600 1 + C T LUSC 50385594 + 50385574 50385614 41 CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC CAGCCACAGCCTGAGGGAGCCGCCTCTGACCTTCCCCCGCC < 41bp 1 0.614224669203567 1 0.467171281576157 experiment 0.771550661592866 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385594 chr19:50385600 synonymous SNV . 0 27 hm5C_associated_SNPs_28572 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr1 193205409 193205409 1 + T A LUSC 193205390 + 193205370 193205410 41 ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGTG ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGAG < 41bp 1 0.679730081109017 1 0.379281759262085 experiment 0.640539837781966 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC73 ENSG00000134371 CDS Human protein_coding chr1:193205390 chr1:193205409 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_28573 0 0 4 U2AF1 POSTAR2 ENCODE chr1:193205372-193205441
64251 chr8 68087623 68087623 1 + G C LUSC 68087626 + 68087606 68087646 41 AGCAAGCCCTGCTAAGAGAGCAGCAGAAGAGGCTGAACAGA AGCAAGCCCTGCTAAGACAGCAGCAGAAGAGGCTGAACAGA < 41bp 1 0.734121412415816 1 0.391477048397064 experiment 0.531757175168369 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68087626 chr8:68087623 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_28574 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr8:68087620-68087640
64251 chr7 148876570 148876570 1 + G C LUSC 148876555 + 148876535 148876575 41 AGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGG AGCACCTGCTGAACCACCGGCGGCTGCACACAGGCCAGCGG < 41bp 1 0.449766646620258 1 0.791322648525238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876555 chr7:148876570 nonsynonymous SNV 0.869 4 36 hm5C_associated_SNPs_28576 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148876565-148876591
64251 chr17 7836605 7836605 1 + G C LUSC 7836604 + 7836584 7836624 41 CCGCCTCATGAAGGGTTAGACGGCTTCGCCCAAGAATTGAG CCGCCTCATGAAGGGTTAGACCGCTTCGCCCAAGAATTGAG < 41bp 1 0.248481854822895 1 0.0967779755592346 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7836604 chr17:7836605 nonsynonymous SNV 0.045 1 22 hm5C_associated_SNPs_28577 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:7836590-7836617
64251 chr1 214819593 214819593 1 + C A LUSC 214819612 + 214819592 214819632 41 TCAGAACTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT TAAGAACTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT < 41bp 1 0.0549989123361522 1 0.131546884775162 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819612 chr1:214819593 stopgain 0.129 0 2 hm5C_associated_SNPs_28579 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:214819565-214819604
64251 chr2 238005479 238005479 1 + G T LUSC 238005475 + 238005455 238005495 41 TTGAATTTAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAA TTGAATTTAGTTGCAGGGGCCCTGTATGTTTCCTTTAACAA < 41bp 1 0.0513449820217485 1 0.0854389071464539 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COPS8 ENSG00000198612 CDS Human protein_coding chr2:238005475 chr2:238005479 nonsynonymous SNV 0.842 3 25 hm5C_associated_SNPs_28581 0 0 2 PRPF8 POSTAR2 ENCODE chr2:238005461-238005529
64251 chr7 128478840 128478840 1 + C G LUSC 128478838 + 128478818 128478858 41 CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG CCCATCACCCGCAGTCCCTTCCGTGTCCATGTGTCGGAAGG < 41bp 1 0.0871818842945602 1 0.0469450354576111 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128478838 chr7:128478840 nonsynonymous SNV 0.993 0 23 hm5C_associated_SNPs_28582 0 0 1 METAP2 POSTAR2 ENCODE chr7:128478840-128478849
64251 chr2 238005478 238005478 1 + G T LUSC 238005475 + 238005455 238005495 41 TTGAATTTAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAA TTGAATTTAGTTGCAGGGGCCCTTGATGTTTCCTTTAACAA < 41bp 1 0.0242104886661666 1 0.106309026479721 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COPS8 ENSG00000198612 CDS Human protein_coding chr2:238005475 chr2:238005478 synonymous SNV . 0 24 hm5C_associated_SNPs_28583 0 0 2 PRPF8 POSTAR2 ENCODE chr2:238005461-238005529
64251 chr11 94533472 94533472 1 + A G LUSC 94533474 + 94533454 94533494 41 ACCCCCTGAGTATGGGGTAACGAGGTGATTATCAACTGCAG ACCCCCTGAGTATGGGGTGACGAGGTGATTATCAACTGCAG < 41bp 1 0.59739929278823 1 0.819646954536438 experiment 0.80520141442354 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94533474 chr11:94533472 synonymous SNV . 0 19 hm5C_associated_SNPs_28584 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:94533464-94533493
64251 chr12 53671319 53671319 1 + G A LUSC 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT GAGGAATTTGAAGTCAATGACCTAAACTATGAAGATAAACT < 41bp 1 0.0278174772384258 1 0.0790231227874756 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671319 synonymous SNV . 0 24 hm5C_associated_SNPs_28586 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53671280-53671320
64251 chr19 36212476 36212476 1 + G T LUSC 36212461 + 36212441 36212481 41 CACAGACACAGGCTCAGCTACTGCAGCCCCTGCAGGCCTTG CACAGACACAGGCTCAGCTACTGCAGCCCCTGCAGTCCTTG < 41bp 1 0.420125050734727 1 0.228055149316788 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36212461 chr19:36212476 nonsynonymous SNV 0.876 1 36 hm5C_associated_SNPs_28588 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:36212461-36212483
64251 chr19 10897272 10897272 1 + G T LUSC 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG GGGAGTCGCTGCCTGCCCTACGTAGCAAACTACAGAGCCAG < 41bp 1 0.171161846451224 1 0.266859412193298 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897272 synonymous SNV . 0 14 hm5C_associated_SNPs_28590 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10897245-10897280
64251 chr20 39744069 39744069 1 + A G LUSC 39744076 + 39744056 39744096 41 GATGATCTTTTTGATAGACTCAATGTGAGTAGATGAAGCAC GATGATCTTTTTGGTAGACTCAATGTGAGTAGATGAAGCAC < 41bp 1 0.524290130144396 1 0.460263162851334 experiment 0.951419739711209 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TOP1 ENSG00000198900 CDS Human protein_coding chr20:39744076 chr20:39744069 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_28591 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:39744059-39744080
64251 chr5 52978959 52978959 1 + G C LUSC 52978955 + 52978935 52978975 41 TTTTTCCTCCTAGGATGGAGCTATGACATTGAAGAGAGGAA TTTTTCCTCCTAGGATGGAGCTATCACATTGAAGAGAGGAA < 41bp 1 0.0795678168021876 1 0.176331400871277 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFS4 ENSG00000164258 CDS Human protein_coding chr5:52978955 chr5:52978959 stoploss 0.922 2 25 hm5C_associated_SNPs_28592 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:52978956-52978991
64251 chr17 65735103 65735103 1 + G C LUSC 65735115 + 65735095 65735135 41 ATTTGAAAGACATCCCAGCACAGCATATCACGGTAAGTGTT ATTTGAAACACATCCCAGCACAGCATATCACGGTAAGTGTT < 41bp 1 0.780912897906605 1 0.342718005180359 experiment 0.43817420418679 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735115 chr17:65735103 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_28595 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:65735100-65735120
64251 chr17 65735103 65735103 1 + G C LUSC 65735123 + 65735103 65735143 41 GACATCCCAGCACAGCATATCACGGTAAGTGTTCATACAAG CACATCCCAGCACAGCATATCACGGTAAGTGTTCATACAAG < 41bp 1 0.686120065054523 1 0.6334188580513 experiment 0.627759869890953 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735123 chr17:65735103 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_28596 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:65735100-65735120
64251 chr6 7393360 7393360 1 + G C LUSC 7393371 + 7393351 7393391 41 ACAGTCAAAGAGAAGGATGACATTCTGTTTGAAGACCTTCA ACAGTCAAACAGAAGGATGACATTCTGTTTGAAGACCTTCA < 41bp 1 0.072774966652208 1 0.0355271399021149 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7393371 chr6:7393360 nonsynonymous SNV 0.007 0 10 hm5C_associated_SNPs_28597 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7393337-7393414
64251 chr19 34949731 34949731 1 + G C LUSC 34949745 + 34949725 34949765 41 GCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAG GCACTGCATCCTCCCAACCCCAATTGTTATGTATGTGCCAG < 41bp 1 0.304657414233725 1 0.0678133964538574 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34949745 chr19:34949731 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_28598 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34949700-34949731
64251 chr19 36216153 36216153 1 + G A LUSC 36216159 + 36216139 36216179 41 AACGTGTGGCTGATGGGGGGCCTGAGTGTGCTCACCTCTGT AACGTGTGGCTGATAGGGGGCCTGAGTGTGCTCACCTCTGT < 41bp 1 0.134310429294729 1 0.119138360023499 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216159 chr19:36216153 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_28599 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr19:36216118-36216164
64251 chr19 36216153 36216153 1 + G A LUSC 36216160 + 36216140 36216180 41 ACGTGTGGCTGATGGGGGGCCTGAGTGTGCTCACCTCTGTG ACGTGTGGCTGATAGGGGGCCTGAGTGTGCTCACCTCTGTG < 41bp 1 0.232509152390151 1 0.142841666936874 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216160 chr19:36216153 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_28600 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr19:36216118-36216164
64251 chr2 136396191 136396191 1 + C G LUSC 136396190 + 136396170 136396210 41 ATCTATTCTTTTTTCTAGTCCCTGTGTTCCCAAGAGAATTA ATCTATTCTTTTTTCTAGTCCGTGTGTTCCCAAGAGAATTA < 41bp 1 0.085136065867257 1 0.0871041715145111 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136396190 chr2:136396191 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_28601 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:136396180-136396200
64251 chr2 54871464 54871464 1 + G T LUSC 54871469 + 54871449 54871489 41 TTGTTTTCCAGGAAGGAATGCAGCTCATTTCAGAAAAGCCT TTGTTTTCCAGGAAGTAATGCAGCTCATTTCAGAAAAGCCT < 41bp 1 0.0481830515169937 1 0.439074069261551 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871469 chr2:54871464 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_28603 0 0 24 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:54871460-54871480
64251 chr2 54871464 54871464 1 + G T LUSC 54871472 + 54871452 54871492 41 TTTTCCAGGAAGGAATGCAGCTCATTTCAGAAAAGCCTGAG TTTTCCAGGAAGTAATGCAGCTCATTTCAGAAAAGCCTGAG < 41bp 1 0.141498908815216 1 0.0479891002178192 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871472 chr2:54871464 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_28604 0 0 24 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:54871460-54871480
64251 chr2 54871464 54871464 1 + G T LUSC 54871474 + 54871454 54871494 41 TTCCAGGAAGGAATGCAGCTCATTTCAGAAAAGCCTGAGAC TTCCAGGAAGTAATGCAGCTCATTTCAGAAAAGCCTGAGAC < 41bp 1 0.0230105218016672 1 0.047519326210022 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871474 chr2:54871464 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_28605 0 0 24 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:54871460-54871480
64251 chr16 2106207 2106207 1 + C T LUSC 2106203 + 2106183 2106223 41 GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCGTCCGGAC GGTGCTCCCTGCAGGATGATCTGTTTGCTGTGCGTCCGGAC < 41bp 1 0.355265524059245 1 0.0615011155605316 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2106203 chr16:2106207 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_28606 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2106203-2106238
64251 chr17 16342876 16342876 1 + A C LUSC 16342874 + 16342854 16342894 41 GAAGCGATAACTGACGACGTCTAATGTCTATCTGACCGCAG GAAGCGATAACTGACGACGTCTCATGTCTATCTGACCGCAG < 41bp 1 0.279823583939454 1 0.130376994609833 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342874 chr17:16342876 . . 0 23 hm5C_associated_SNPs_28607 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr17 16342876 16342876 1 + A C LUSC 16342881 + 16342861 16342901 41 TAACTGACGACGTCTAATGTCTATCTGACCGCAGTCGCTGA TAACTGACGACGTCTCATGTCTATCTGACCGCAGTCGCTGA < 41bp 1 0.118118828459956 1 0.0679621696472168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342881 chr17:16342876 . . 0 16 hm5C_associated_SNPs_28608 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr11 77301394 77301394 1 + G A LUSC 77301390 + 77301370 77301410 41 CATGTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGC CATGTCCCCCGAGACGGGTGCGGTAAGGCTATTGGCTCAGC < 41bp 1 0.652278829139568 1 0.52704256772995 experiment 0.695442341720864 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301390 chr11:77301394 synonymous SNV . 0 25 hm5C_associated_SNPs_28609 0 0 2 LIN28B POSTAR2 ENCODE chr11:77301342-77301412
64251 chr3 119205770 119205770 1 + A T LUSC 119205764 + 119205744 119205784 41 GAATACACCAAAAACCAGGCCTGGAAATCTATGAAAGTAAT GAATACACCAAAAACCAGGCCTGGAATTCTATGAAAGTAAT < 41bp 1 0.654110429566307 1 0.162904053926468 experiment 0.691779140867386 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119205764 chr3:119205770 nonsynonymous SNV 0.994 4 27 hm5C_associated_SNPs_28612 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119205680-119205826
64251 chr10 103917285 103917285 1 + G C LUSC 103917292 + 103917272 103917312 41 ATGATGATGATGAGGAGGACCAAAAGAAACAGCCTGTCCAG ATGATGATGATGACGAGGACCAAAAGAAACAGCCTGTCCAG < 41bp 1 0.76922215781235 1 0.423657417297363 experiment 0.4615556843753 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917292 chr10:103917285 nonsynonymous SNV 0.688 1 14 hm5C_associated_SNPs_28624 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103917191-103917293
64251 chr1 228566491 228566491 1 + C G LUSC 228566484 + 228566464 228566504 41 TACAAGAGGCACAACCTGGCCCAGGTGCGCTGAGGGTCGCC TACAAGAGGCACAACCTGGCCCAGGTGGGCTGAGGGTCGCC < 41bp 1 0.111017354692537 1 0.777245223522186 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228566484 chr1:228566491 nonsynonymous SNV 0.410 1 28 hm5C_associated_SNPs_28626 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228566479-228566512
64251 chr1 7796554 7796554 1 + G T LUSC 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCGGAATGACCCTACTCCACCTGGCCTCTGCCCAGGG < 41bp 1 0.264112894143446 1 0.146364569664001 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796554 nonsynonymous SNV 0.990 4 31 hm5C_associated_SNPs_28627 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:7796533-7796565
64251 chr2 191795202 191795202 1 + C G LUSC 191795198 + 191795178 191795218 41 AAATCTGGAGTTGCTGGGGGCATTCTTTTAGTTGTCCCCAA AAATCTGGAGTTGCTGGGGGCATTGTTTTAGTTGTCCCCAA < 41bp 1 0.174605750051513 1 0.121117770671844 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GLS ENSG00000115419 CDS Human protein_coding chr2:191795198 chr2:191795202 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_28628 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:191795187-191795208
64251 chr10 98744490 98744490 1 + G C LUSC 98744477 + 98744457 98744497 41 GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCATGCTGATGG GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCATCCTGATGG < 41bp 1 0.579313233204826 1 0.397761255502701 experiment 0.841373533590348 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LCOR ENSG00000155640 CDS Human other chr10:98744477 chr10:98744490 nonsynonymous SNV 0.065 0 34 hm5C_associated_SNPs_28629 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:98744486-98744522
64251 chr12 6979488 6979488 1 + C T LUSC 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCTTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG < 41bp 1 0.122933028793337 1 0.0329270362854004 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979488 nonsynonymous SNV 0.981 2 5 hm5C_associated_SNPs_28632 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr12:6979469-6979494
64251 chr12 6979488 6979488 1 + C T LUSC 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT TTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT < 41bp 1 0.609196157497091 1 0.831946909427643 experiment 0.781607685005818 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979488 nonsynonymous SNV 0.981 2 1 hm5C_associated_SNPs_28633 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr12:6979469-6979494
64251 chr10 71158372 71158372 1 + G A LUSC 71158355 + 71158335 71158375 41 CTCTTGTCCCCCACAGTGACCGATTAGCACTGCTCCAGGTC CTCTTGTCCCCCACAGTGACCGATTAGCACTGCTCCAAGTC < 41bp 1 0.148314138985733 1 0.0373712778091431 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71158355 chr10:71158372 synonymous SNV . 0 38 hm5C_associated_SNPs_28635 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr10:71158356-71158390
64251 chr20 3520918 3520918 1 + A T LUSC 3520926 + 3520906 3520946 41 GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGATGG GCTACAGAGTGTTGTTGGGACCATTTATATGTTTATGATGG < 41bp 1 0.0237424763107944 1 0.088699072599411 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3520926 chr20:3520918 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_28636 0 0 2 LIN28B POSTAR2 ENCODE chr20:3520898-3520942
64251 chr16 460303 460303 1 + T A LUSC 460313 + 460293 460333 41 TTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAA TTCAAGACCGAGATGGACATCGATACCAGCGGCACCTTCAA < 41bp 1 0.531958634688005 1 0.405347406864166 experiment 0.936082730623991 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DECR2 ENSG00000242612 CDS Human protein_coding chr16:460313 chr16:460303 nonsynonymous SNV 0.919 4 11 hm5C_associated_SNPs_28637 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:460302-460324
64251 chr5 148730833 148730833 1 + G C LUSC 148730829 + 148730809 148730849 41 AGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGAAGAG AGTGGAAGTGGCAGTGGAGTCTCACAGAAGACTGTGAAGAG < 41bp 1 0.695047592678984 1 0.432484984397888 experiment 0.609904814642032 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148730829 chr5:148730833 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_28641 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr5:148730772-148730833
64251 chr1 228362651 228362651 1 + C G LUSC 228362665 + 228362645 228362685 41 CCTCACCCAGGATGAAGGCCCAGCCCTGGTGCCCGGGGGCC CCTCACGCAGGATGAAGGCCCAGCCCTGGTGCCCGGGGGCC < 41bp 1 0.508095757987838 1 0.220157712697983 experiment 0.983808484024324 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362665 chr1:228362651 synonymous SNV . 0 7 hm5C_associated_SNPs_28642 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:228362625-228362656
64251 chr17 62223788 62223788 1 + G T LUSC 62223769 + 62223749 62223789 41 CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCTC < 41bp 1 0.330214330245523 1 0.105809360742569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223769 chr17:62223788 . . 0 40 hm5C_associated_SNPs_28643 0 0 9 METTL3 POSTAR2 GSE46705,GSM1135012 chr17:62223723-62223791
64251 chr17 62223788 62223788 1 + G T LUSC 62223787 + 62223767 62223807 41 TGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG TGCTTGCGCATAACTGGGGCCTCCTGGCCTCCCGCGGGCGG < 41bp 1 0.209975089775285 1 0.0763234198093414 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223787 chr17:62223788 . . 0 22 hm5C_associated_SNPs_28644 0 0 9 METTL3 POSTAR2 GSE46705,GSM1135012 chr17:62223723-62223791
64251 chr17 62223788 62223788 1 + G T LUSC 62223795 + 62223775 62223815 41 CATAACTGGGGCCGCCTGGCCTCCCGCGGGCGGCCTTTTTA CATAACTGGGGCCTCCTGGCCTCCCGCGGGCGGCCTTTTTA < 41bp 1 0.344477157101462 1 0.716111063957214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223795 chr17:62223788 . . 0 14 hm5C_associated_SNPs_28645 0 0 9 METTL3 POSTAR2 GSE46705,GSM1135012 chr17:62223723-62223791
64251 chr17 62223788 62223788 1 + G T LUSC 62223805 + 62223785 62223825 41 GCCGCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCG GCCTCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCG < 41bp 1 0.372460940999676 1 0.233799487352371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223805 chr17:62223788 . . 0 4 hm5C_associated_SNPs_28646 0 0 9 METTL3 POSTAR2 GSE46705,GSM1135012 chr17:62223723-62223791
64251 chr17 62223788 62223788 1 + G T LUSC 62223808 + 62223788 62223828 41 GCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCGACA TCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCGACA < 41bp 1 0.0256884787274411 1 0.0235040783882141 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223808 chr17:62223788 . . 0 1 hm5C_associated_SNPs_28647 0 0 9 METTL3 POSTAR2 GSE46705,GSM1135012 chr17:62223723-62223791
64251 chr1 32502597 32502597 1 + G T LUSC 32502589 + 32502569 32502609 41 TACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGC TACCTGAACCCTCTCGTGGACGTGGGGTTCCAGTGAGAGGC < 41bp 1 0.757256407463748 1 0.50188273191452 experiment 0.485487185072503 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502589 chr1:32502597 synonymous SNV . 0 29 hm5C_associated_SNPs_28648 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32502558-32502614
64251 chr1 32502597 32502597 1 + G T LUSC 32502598 + 32502578 32502618 41 CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT CCTCTCGTGGACGTGGGGTTCCAGTGAGAGGCCGGGGAGCT < 41bp 1 0.67693091450939 1 0.548099279403687 experiment 0.64613817098122 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502598 chr1:32502597 synonymous SNV . 0 20 hm5C_associated_SNPs_28649 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32502558-32502614
64251 chr5 176520503 176520503 1 + G A LUSC 176520483 + 176520463 176520503 41 GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCG GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCA < 41bp 1 0.134215696231834 1 0.0573561489582062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4;FGFR4 ENSG00000160867;ENSG00000160867 exonic;splicing Human other chr5:176520483 chr5:176520503 nonsynonymous SNV 0.485 2 41 hm5C_associated_SNPs_28651 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176520475-176520508
64251 chr3 132441198 132441198 1 - A T LUSC 132441200 - 132441180 132441220 41 GTAGTAGCGGCAACGGACGCCATGGGGACCGCCTCGTCGCT GTAGTAGCGGCAACGGACGCCAAGGGGACCGCCTCGTCGCT < 41bp 1 0.756451102117887 1 0.831326246261597 experiment 0.487097795764226 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPHP3 ENSG00000113971 CDS Human protein_coding chr3:132441200 chr3:132441198 nonsynonymous SNV 0.087 5 23 hm5C_associated_SNPs_28652 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:132441198-132441199
64251 chr20 30386278 30386278 1 + G T LUSC 30386297 + 30386277 30386317 41 AGCCCAGCAGTTGGAGGAGGCCAGACTACAGGAGGAAGAGC ATCCCAGCAGTTGGAGGAGGCCAGACTACAGGAGGAAGAGC < 41bp 1 0.514221040155011 1 0.296442687511444 experiment 0.971557919689979 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30386297 chr20:30386278 nonsynonymous SNV 0.970 0 2 hm5C_associated_SNPs_28653 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:30386249-30386284
64251 chr12 109536308 109536308 1 + C A LUSC 109536312 + 109536292 109536332 41 CCTCGCCGCTGAGTGCCGAGCAGTTGGACCGGATCCAGAGG CCTCGCCGCTGAGTGCAGAGCAGTTGGACCGGATCCAGAGG < 41bp 1 0.558141235128809 1 0.524835407733917 experiment 0.883717529742382 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109536312 chr12:109536308 synonymous SNV . 0 17 hm5C_associated_SNPs_28655 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:109536268-109536314
64251 chr16 67006829 67006829 1 + A T LUSC 67006809 + 67006789 67006829 41 CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCA CCCAATTCAACCAGGCGGAACAATATCTGGAGATCAACCCT < 41bp 1 0.241568813585748 1 0.228232890367508 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:67006809 chr16:67006829 synonymous SNV . 0 41 hm5C_associated_SNPs_28656 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr13 20567803 20567803 1 + G A LUSC 20567812 + 20567792 20567832 41 GTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGG GTAAGCTCTGTAAATGATGGCCAATTAGAAAATACTGACGG < 41bp 1 0.0636801233774643 1 0.137154579162598 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567812 chr13:20567803 synonymous SNV . 0 12 hm5C_associated_SNPs_28659 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567803 20567803 1 + G A LUSC 20567813 + 20567793 20567833 41 TAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGG TAAGCTCTGTAAATGATGGCCAATTAGAAAATACTGACGGG < 41bp 1 0.0661753479822093 1 0.184142261743546 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567813 chr13:20567803 synonymous SNV . 0 11 hm5C_associated_SNPs_28660 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr20 57480498 57480498 1 + C T LUSC 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA GAGGATGAAGGAGTGCGTGCCTGCTACGAATGCTCCAACGA < 41bp 1 0.452736541775193 1 0.319553405046463 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480498 nonsynonymous SNV 0.986 5 31 hm5C_associated_SNPs_28661 1 0 28 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr20 57480498 57480498 1 + C T LUSC 57480512 + 57480492 57480532 41 TACGAACGCTCCAACGAGTACCAGCTGATTGACTGTGCCCA TACGAATGCTCCAACGAGTACCAGCTGATTGACTGTGCCCA < 41bp 1 0.141494980955494 1 0.0771267414093018 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480512 chr20:57480498 nonsynonymous SNV 0.986 5 7 hm5C_associated_SNPs_28662 1 0 28 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr10 72289798 72289798 1 + C T LUSC 72289804 + 72289784 72289824 41 TCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGG TCAGGCGGGTCCTCTAGAAACTCCAGAAGGACGGACATAGG < 41bp 1 0.784613544359159 1 0.880645036697388 experiment 0.430772911281683 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout PALD1 ENSG00000107719 CDS Human protein_coding chr10:72289804 chr10:72289798 stopgain 0.967 1 15 hm5C_associated_SNPs_28663 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:72289772-72289800
64251 chr12 120878332 120878332 1 + G C LUSC 120878328 + 120878308 120878348 41 AATCCACTTCCAACTGGCTACGAAGATGAATAAAGAGAATC AATCCACTTCCAACTGGCTACGAACATGAATAAAGAGAATC < 41bp 1 0.165315584425354 1 0.143697202205658 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120878328 chr12:120878332 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_28664 0 0 7 DDX55 POSTAR2 ENCODE chr12:120878306-120878395
64251 chr6 31713065 31713065 1 + C T LUSC 31713049 + 31713029 31713069 41 TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGCCAGTG TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGCTAGTG < 41bp 1 0.345707884096085 1 0.518393158912659 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31713049 chr6:31713065 synonymous SNV . 0 37 hm5C_associated_SNPs_28665 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31713059-31713092
64251 chr6 21594886 21594886 1 + T C LUSC 21594902 + 21594882 21594922 41 CGCCTCCACGGGCGGCAAGGCCGACGACCCGAGCTGGTGCA CGCCCCCACGGGCGGCAAGGCCGACGACCCGAGCTGGTGCA < 41bp 1 0.334376403310798 1 0.172705769538879 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SOX4 ENSG00000124766 CDS Human protein_coding chr6:21594902 chr6:21594886 nonsynonymous SNV 0.995 1 5 hm5C_associated_SNPs_28666 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:21594880-21594900
64251 chr5 118877679 118877679 1 + C G LUSC 118877694 + 118877674 118877714 41 CTACGCCAAGCTCTGAAGGGCACACTACACTATTAATAAAA CTACGGCAAGCTCTGAAGGGCACACTACACTATTAATAAAA < 41bp 1 0.177243877590375 1 0.0844927430152893 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118877694 chr5:118877679 nonsynonymous SNV 0.996 2 6 hm5C_associated_SNPs_28667 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118877651-118877684
64251 chr9 100405529 100405529 1 + G C LUSC 100405545 + 100405525 100405565 41 ATTAGTTGGACTACTGAATGCCAGGAATTACAATTTTGGTG ATTACTTGGACTACTGAATGCCAGGAATTACAATTTTGGTG < 41bp 1 0.307135173959362 1 0.496228754520416 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100405545 chr9:100405529 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_28668 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100405499-100405568
64251 chr22 35719874 35719874 1 + C T LUSC 35719884 + 35719864 35719904 41 CCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAA CCATACTCTCTGGTGACACGCCCATAGCACCAACCCCGGAA < 41bp 1 0.179890655690355 1 0.117949515581131 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719884 chr22:35719874 synonymous SNV 0.002 0 11 hm5C_associated_SNPs_28669 0 0 1 EFTUD2 POSTAR2 ENCODE chr22:35719822-35719897
64251 chr7 100210419 100210419 1 + G C LUSC 100210428 + 100210408 100210448 41 AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGG AGCCTGCATGCCCCGTGGGGCGCCCCAGGACCAGGAGCTGG < 41bp 1 0.370745674776147 1 0.112857669591904 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210428 chr7:100210419 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_28670 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210419 100210419 1 + G C LUSC 100210430 + 100210410 100210450 41 CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG CCTGCATGCCCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG < 41bp 1 0.681796574793726 1 0.111792385578156 experiment 0.636406850412548 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210430 chr7:100210419 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_28671 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210419 100210419 1 + G C LUSC 100210431 + 100210411 100210451 41 CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG CTGCATGCCCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG < 41bp 1 0.452907752797444 1 0.765119612216949 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210431 chr7:100210419 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_28672 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr7 100210419 100210419 1 + G C LUSC 100210432 + 100210412 100210452 41 TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG TGCATGCCCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG < 41bp 1 0.538803100226406 1 0.78532999753952 experiment 0.922393799547188 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210432 chr7:100210419 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_28673 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr11 65273148 65273148 1 + G A LUSC 65273147 + 65273127 65273167 41 TTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAA TTTCAAGGTAACGATGGTGTCAAGGTCTTTGGTGGGTTGAA < 41bp 1 0.77762413416581 1 0.852648377418518 experiment 0.44475173166838 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273147 chr11:65273148 . . 0 22 hm5C_associated_SNPs_28676 0 0 114 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65273080-65273160
64251 chr11 65273148 65273148 1 + G A LUSC 65273153 + 65273133 65273173 41 GGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAACTATGT GGTAACGATGGTGTCAAGGTCTTTGGTGGGTTGAACTATGT < 41bp 1 0.449501848088695 1 0.231234520673752 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273153 chr11:65273148 . . 0 16 hm5C_associated_SNPs_28677 0 0 114 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65273080-65273160
64251 chr11 65273148 65273148 1 + G A LUSC 65273168 + 65273148 65273188 41 GAGGTCTTTGGTGGGTTGAACTATGTTAGAAAAGGCCATTA AAGGTCTTTGGTGGGTTGAACTATGTTAGAAAAGGCCATTA < 41bp 1 0.603829243331453 1 0.2643803358078 experiment 0.792341513337095 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273168 chr11:65273148 . . 0 1 hm5C_associated_SNPs_28678 0 0 114 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65273080-65273160
64251 chr2 207174838 207174838 1 + C A LUSC 207174847 + 207174827 207174867 41 TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGG TTTGATGATGAATGTGAGACCAAAAAAGTTTCTTCGAAGGG < 41bp 1 0.435120454891077 1 0.126999408006668 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174847 chr2:207174838 nonsynonymous SNV 0.987 0 12 hm5C_associated_SNPs_28679 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174770-207174869
64251 chr17 16285603 16285603 1 + G C LUSC 16285613 + 16285593 16285633 41 GCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATCC GCAGCTGGAACATGGCCGCACTCTTTCTGACTACAACATCC < 41bp 1 0.309903497429523 1 0.101642191410065 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285613 chr17:16285603 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_28680 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:16285600-16285620
64251 chr2 233704599 233704599 1 + C T LUSC 233704582 + 233704562 233704602 41 CCTTCTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGC CCTTCTTCTTCAACGTGGGGCCAGCAGTCCAATACAATAGC < 41bp 1 0.0497481170286036 1 0.213628321886063 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704582 chr2:233704599 nonsynonymous SNV 0.991 0 38 hm5C_associated_SNPs_28682 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:233704591-233704624
64251 chr2 233704599 233704599 1 + C T LUSC 233704586 + 233704566 233704606 41 CTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGCATGT CTTCTTCAACGTGGGGCCAGCAGTCCAATACAATAGCATGT < 41bp 1 0.102789441206996 1 0.609280407428741 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704586 chr2:233704599 nonsynonymous SNV 0.991 0 34 hm5C_associated_SNPs_28683 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:233704591-233704624
64251 chr21 42629177 42629177 1 + C T LUSC 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCTACGGTG < 41bp 1 0.53285287426216 1 0.113607376813889 experiment 0.934294251475679 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629177 synonymous SNV . 0 35 hm5C_associated_SNPs_28685 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr16 601556 601556 1 + G A LUSC 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGACAGC < 41bp 1 0.0240060889901214 1 0.0508137047290802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601556 nonsynonymous SNV 0.988 5 37 hm5C_associated_SNPs_28686 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr16 601556 601556 1 + G A LUSC 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACCCGTGGGGCCGTTTCTCCTGGAACGACAGCTGGTCCG < 41bp 1 0.483540520042573 1 0.80096709728241 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601556 nonsynonymous SNV 0.988 5 30 hm5C_associated_SNPs_28687 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr10 75557803 75557803 1 + T C LUSC 75557805 + 75557785 75557825 41 CTGGCTCTCACGTACTTATTCTTCCCACGTTTCCTGGATTA CTGGCTCTCACGTACTTACTCTTCCCACGTTTCCTGGATTA < 41bp 1 0.11351707015939 1 0.207676887512207 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557805 chr10:75557803 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_28688 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:75557797-75557820
64251 chr7 94917905 94917905 1 + G A LUSC 94917917 + 94917897 94917937 41 CCGTTCAGGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA CCGTTCAGAAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA < 41bp 1 0.502760510122826 1 0.163000345230103 experiment 0.994478979754348 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917917 chr7:94917905 nonsynonymous SNV 0.459 3 9 hm5C_associated_SNPs_28690 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr16 772325 772325 1 + A G LUSC 772313 + 772293 772333 41 CTGTTCTCTCCCTCAGCTCCCGCTGCTGGAGGACAAGCTGC CTGTTCTCTCCCTCAGCTCCCGCTGCTGGAGGGCAAGCTGC < 41bp 1 0.439313657300459 1 0.0888529717922211 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM173A ENSG00000103254 CDS Human protein_coding chr16:772313 chr16:772325 nonsynonymous SNV 0.938 0 33 hm5C_associated_SNPs_28691 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:772325-772326
64251 chr1 237052583 237052583 1 + G A LUSC 237052594 + 237052574 237052614 41 GGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAG GGCAGCTCCAGGGCAAGTACCCGAATCGAGGCTTTCCCAAG < 41bp 1 0.474458082271577 1 0.766167759895325 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 CDS Human protein_coding chr1:237052594 chr1:237052583 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_28694 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:237052565-237052587
64251 chr2 138762736 138762736 1 + T A LUSC 138762727 + 138762707 138762747 41 GTATTATGTAAAAGACATCCCAGCTACCCTGAAATTCTTCC GTATTATGTAAAAGACATCCCAGCTACCCAGAAATTCTTCC < 41bp 1 0.306792428807737 1 0.396398097276688 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HNMT ENSG00000150540 CDS Human protein_coding chr2:138762727 chr2:138762736 nonsynonymous SNV 0.993 2 30 hm5C_associated_SNPs_28695 0 0 2 EIF3H POSTAR2 ENCODE chr2:138762736-138762786
64251 chr17 61499206 61499206 1 + G C LUSC 61499200 + 61499180 61499220 41 ACGTGAAGGTAGCTCGGACTCTACCTGTGGCTCAGGCATAC ACGTGAAGGTAGCTCGGACTCTACCTCTGGCTCAGGCATAC < 41bp 1 0.355587612594159 1 0.0971373319625854 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TANC2 ENSG00000170921 CDS Human protein_coding chr17:61499200 chr17:61499206 nonsynonymous SNV 0.998 2 27 hm5C_associated_SNPs_28696 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:61499184-61499206
64251 chrX 73043319 73043319 1 - C T LUSC 73043299 - 73043279 73043319 41 GAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAA AAGAGATGAGGGCATTAGATCACTGACAGCTGAAGATAGAA < 41bp 1 0.127878877845822 1 0.0734447836875916 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043299 chrX:73043319 . . 0 1 hm5C_associated_SNPs_28697 0 0 77 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043319 73043319 1 - C T LUSC 73043307 - 73043287 73043327 41 GAGGATAAGAGAGATGAGGGCATTAGATCACTGACAGCTGA GAGGATAAAAGAGATGAGGGCATTAGATCACTGACAGCTGA < 41bp 1 0.0823378511143115 1 0.0915734469890594 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043307 chrX:73043319 . . 0 9 hm5C_associated_SNPs_28698 0 0 77 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr11 68204453 68204453 1 + A T LUSC 68204450 + 68204430 68204470 41 CCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTG CCCCGACTGTATCGACGGCTCCGTCGAGCTCATGTGTGGTG < 41bp 1 0.0831519738937148 1 0.0910672843456268 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204450 chr11:68204453 nonsynonymous SNV 0.645 4 24 hm5C_associated_SNPs_28700 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr11 68204453 68204453 1 + A T LUSC 68204451 + 68204431 68204471 41 CCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGA CCCGACTGTATCGACGGCTCCGTCGAGCTCATGTGTGGTGA < 41bp 1 0.239730239155627 1 0.321241319179535 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204451 chr11:68204453 nonsynonymous SNV 0.645 4 23 hm5C_associated_SNPs_28701 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr17 78335564 78335564 1 + A C LUSC 78335559 + 78335539 78335579 41 CCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG CCCAAGAAGTTCGTGGACATCTTTCCGCAGACTCCTCTGGG < 41bp 1 0.0275865138751964 1 0.0498823821544647 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78335559 chr17:78335564 nonsynonymous SNV 0.011 1 26 hm5C_associated_SNPs_28704 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr17:78335554-78335577
64251 chr2 153494180 153494180 1 + G A LUSC 153494168 + 153494148 153494188 41 TCTTCTTTCCTGTCTTTGTCCGGTTTGTGAAAGCATATAAG TCTTCTTTCCTGTCTTTGTCCGGTTTGTGAAAACATATAAG < 41bp 1 0.161736832782885 1 0.248919248580933 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153494168 chr2:153494180 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_28706 0 0 1 PRPF8 POSTAR2 ENCODE chr2:153494179-153494224
64251 chr11 61507949 61507949 1 + A C LUSC 61507955 + 61507935 61507975 41 CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGG CTGCTGTGAGCAGGCGGAGCCCACATACTTTGCCATCTGGG < 41bp 1 0.115454935381908 1 0.314559757709503 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507955 chr11:61507949 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_28707 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61507944-61507966
64251 chr19 579631 579631 1 + C T LUSC 579629 + 579609 579649 41 CGTGGTGCTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGG CGTGGTGCTGAAGGAGGACGCGTTGCCCGGCCAGAAAACGG < 41bp 1 0.246573518169382 1 0.376305282115936 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579629 chr19:579631 synonymous SNV . 0 23 hm5C_associated_SNPs_28708 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579631 579631 1 + C T LUSC 579636 + 579616 579656 41 CTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAA CTGAAGGAGGACGCGTTGCCCGGCCAGAAAACGGAGTTCAA < 41bp 1 0.548387886332846 1 0.797972440719604 experiment 0.903224227334308 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579636 chr19:579631 synonymous SNV . 0 16 hm5C_associated_SNPs_28709 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579631 579631 1 + C T LUSC 579640 + 579620 579660 41 AGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAAGTGA AGGAGGACGCGTTGCCCGGCCAGAAAACGGAGTTCAAGTGA < 41bp 1 0.752305051013846 1 0.586934030056 experiment 0.495389897972308 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579640 chr19:579631 synonymous SNV . 0 12 hm5C_associated_SNPs_28710 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579631 579631 1 + C T LUSC 579647 + 579627 579667 41 CGCGCTGCCCGGCCAGAAAACGGAGTTCAAGTGAGTGCCTG CGCGTTGCCCGGCCAGAAAACGGAGTTCAAGTGAGTGCCTG < 41bp 1 0.798693948887732 1 0.870799779891968 experiment 0.402612102224535 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579647 chr19:579631 synonymous SNV . 0 5 hm5C_associated_SNPs_28711 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr16 12450136 12450136 1 + G T LUSC 12450135 + 12450115 12450155 41 GCTCATCGATCTCCGGGGACCGGTGAGTGTTTCCCCAACCC GCTCATCGATCTCCGGGGACCTGTGAGTGTTTCCCCAACCC < 41bp 1 0.333401492785088 1 0.142026573419571 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX29 ENSG00000048471 CDS Human protein_coding chr16:12450135 chr16:12450136 synonymous SNV . 0 22 hm5C_associated_SNPs_28712 0 0 1 ZNF622 POSTAR2 ENCODE chr16:12450090-12450144
64251 chr21 47986572 47986572 1 + G A LUSC 47986588 + 47986568 47986608 41 ATCCGAGCACACAGGAGCATCGCTGAGTGGTAAGAGCCCAG ATCCAAGCACACAGGAGCATCGCTGAGTGGTAAGAGCCCAG < 41bp 1 0.351872804310937 1 0.418894708156586 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47986588 chr21:47986572 nonsynonymous SNV 0.993 4 5 hm5C_associated_SNPs_28715 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:47986551-47986581
64251 chr2 32339808 32339808 1 + G A LUSC 32339810 + 32339790 32339830 41 GGATCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTA GGATCTGCAGGCCTTTCAAGCCACCATAGAGCACCTAGTTA < 41bp 1 0.104398120341575 1 0.0842215120792389 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339810 chr2:32339808 nonsynonymous SNV 0.946 0 19 hm5C_associated_SNPs_28716 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:32339780-32339843
64251 chr2 32339808 32339808 1 + G A LUSC 32339813 + 32339793 32339833 41 TCTGCAGGCCTTTCAGGCCACCATAGAGCACCTAGTTACAG TCTGCAGGCCTTTCAAGCCACCATAGAGCACCTAGTTACAG < 41bp 1 0.270303337792057 1 0.0479306578636169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32339813 chr2:32339808 nonsynonymous SNV 0.946 0 16 hm5C_associated_SNPs_28717 0 0 4 IGF2BP1 POSTAR2 ENCODE chr2:32339780-32339843
64251 chr22 38352842 38352842 1 + C T LUSC 38352823 + 38352803 38352843 41 ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCC ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGTC < 41bp 1 0.761650859976502 1 0.510667443275452 experiment 0.476698280046996 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352823 chr22:38352842 nonsynonymous SNV 0.942 1 40 hm5C_associated_SNPs_28720 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr22 38352842 38352842 1 + C T LUSC 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT GAGGATGAAGGGCTAGATGACTTGGAGAATGTCGAAGAGGT < 41bp 1 0.553498480423498 1 0.166638195514679 experiment 0.893003039153004 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352842 nonsynonymous SNV 0.942 1 32 hm5C_associated_SNPs_28721 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr22 38352842 38352842 1 + C T LUSC 38352843 + 38352823 38352863 41 CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGCC CTAGATGACTTGGAGAATGTCGAAGAGGTCAGTATTCAGCC < 41bp 1 0.702097028898579 1 0.579234778881073 experiment 0.595805942202841 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352843 chr22:38352842 nonsynonymous SNV 0.942 1 20 hm5C_associated_SNPs_28722 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr9 35560827 35560827 1 + G A LUSC 35560834 + 35560814 35560854 41 CGAAAAGCCCAGCGGGAGGCCCGGCCCACAAATAGGTGAGA CGAAAAGCCCAGCAGGAGGCCCGGCCCACAAATAGGTGAGA < 41bp 1 0.0717582085454181 1 0.264071196317673 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RUSC2 ENSG00000198853 CDS Human protein_coding chr9:35560834 chr9:35560827 nonsynonymous SNV 0.959 0 14 hm5C_associated_SNPs_28723 0 0 1 DDX6 POSTAR2 ENCODE chr9:35560817-35560849
64251 chr2 170592392 170592392 1 + C T LUSC 170592378 + 170592358 170592398 41 TGGAGGCTATTACTGGCATCCTTTATCAGAGGTTCACATAT TGGAGGCTATTACTGGCATCCTTTATCAGAGGTTTACATAT < 41bp 1 0.297401437420553 1 0.744020760059357 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170592378 chr2:170592392 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_28724 0 0 1 PUM2 POSTAR2 ENCODE chr2:170592351-170592402
64251 chr12 109937553 109937553 1 + G C LUSC 109937571 + 109937551 109937591 41 AAGAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTG AACAAGTCCAACCTGACCCACTGGCATCCTGTCCTTGGCTG < 41bp 1 0.517272505083433 1 0.432911694049835 experiment 0.965454989833134 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE3B ENSG00000151148 CDS Human protein_coding chr12:109937571 chr12:109937553 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_28725 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:109937539-109937564
64251 chr7 98601889 98601889 1 + G C LUSC 98601905 + 98601885 98601925 41 TCTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC TCTTCGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC < 41bp 1 0.121926742924864 1 0.452069163322449 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98601905 chr7:98601889 nonsynonymous SNV 0.906 5 5 hm5C_associated_SNPs_28726 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98601856-98601894
64251 chr16 31123201 31123201 1 + G A LUSC 31123193 + 31123173 31123213 41 TGTTGCCATCTTGCTAGGATCTCAGACCGTGGTGGAGGAAT TGTTGCCATCTTGCTAGGATCTCAGACCATGGTGGAGGAAT < 41bp 1 0.390884815009505 1 0.185617089271545 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BCKDK ENSG00000103507 CDS Human protein_coding chr16:31123193 chr16:31123201 nonsynonymous SNV 0.948 4 29 hm5C_associated_SNPs_28730 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:31123194-31123223
64251 chr3 99897173 99897173 1 + C G LUSC 99897188 + 99897168 99897208 41 AACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA AACTTGTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA < 41bp 1 0.239194765779569 1 0.151932060718536 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897188 chr3:99897173 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_28731 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:99897148-99897198
64251 chr3 99897173 99897173 1 + C G LUSC 99897190 + 99897170 99897210 41 CTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATC CTTGTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATC < 41bp 1 0.270511529890993 1 0.141157597303391 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897190 chr3:99897173 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_28732 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:99897148-99897198
64251 chrX 56591625 56591625 1 + C A LUSC 56591612 + 56591592 56591632 41 AGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCCAGACACA AGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCAAGACACA < 41bp 1 0.345474193702142 1 0.325077533721924 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591612 chrX:56591625 nonsynonymous SNV 0.995 5 34 hm5C_associated_SNPs_28733 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:56591620-56591640
64251 chr7 56130730 56130730 1 + C G LUSC 56130745 + 56130725 56130765 41 ATTCTCTTGGTTGATGAGATCATGCGAGCTGGAATGTCTTC ATTCTGTTGGTTGATGAGATCATGCGAGCTGGAATGTCTTC < 41bp 1 0.439986909892619 1 0.0598278939723969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56130745 chr7:56130730 synonymous SNV . 0 6 hm5C_associated_SNPs_28734 0 0 3 DDX55 POSTAR2 ENCODE chr7:56130703-56130731
64251 chr20 57484842 57484842 1 + G C LUSC 57484828 + 57484808 57484848 41 CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAACAGCATC < 41bp 1 0.402872230266245 1 0.25898203253746 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GNAS ENSG00000087460 CDS Human protein_coding chr20:57484828 chr20:57484842 nonsynonymous SNV 1.000 5 35 hm5C_associated_SNPs_28735 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57484779-57484852
64251 chr6 160477534 160477534 1 + C G LUSC 160477524 + 160477504 160477544 41 CTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAACGAC CTGTGGAACACAGAGGCTGCCTGTCCCATTGAGACAACGAC < 41bp 1 0.0332560324846523 1 0.116905510425568 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160477524 chr6:160477534 nonsynonymous SNV 0.164 0 31 hm5C_associated_SNPs_28736 0 0 3 DDX24 POSTAR2 ENCODE chr6:160477512-160477547
64251 chr9 37432082 37432082 1 + C T LUSC 37432088 + 37432068 37432108 41 TGGACTGGATGTGACGAGCCCAGAACCACTGCCTACAAACC TGGACTGGATGTGATGAGCCCAGAACCACTGCCTACAAACC < 41bp 1 0.521611972755783 1 0.366869568824768 experiment 0.956776054488434 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37432088 chr9:37432082 nonsynonymous SNV 0.969 2 15 hm5C_associated_SNPs_28737 1 0 6 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:37432051-37432083
64251 chr18 13059273 13059273 1 + G T LUSC 13059272 + 13059252 13059292 41 GCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGC GCAGAAGCTTTGGCCAGCACCTTCACTCTCACTGCCATTGC < 41bp 1 0.506145012602131 1 0.39335572719574 experiment 0.987709974795737 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13059272 chr18:13059273 nonsynonymous SNV 0.008 4 22 hm5C_associated_SNPs_28738 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:13059268-13059285
64251 chr16 8735040 8735040 1 + A T LUSC 8735032 + 8735012 8735052 41 TGGACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTC TGGACTGGCTGAAGGACGACCTCTGCACTGGTGTGTGTTTC < 41bp 1 0.212737487326899 1 0.524645268917084 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735032 chr16:8735040 synonymous SNV . 0 29 hm5C_associated_SNPs_28740 0 0 19 BUD13 POSTAR2 ENCODE chr16:8735004-8735058
64251 chr19 18888184 18888184 1 + C T LUSC 18888174 + 18888154 18888194 41 CCAGCCACCGAGGACACCTTCCGGATGGACCGCCTGTGAGC CCAGCCACCGAGGACACCTTCCGGATGGACTGCCTGTGAGC < 41bp 1 0.682682646992135 1 0.847551345825195 experiment 0.634634706015731 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18888174 chr19:18888184 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_28741 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18888139-18888189
64251 chr11 77301386 77301386 1 + G A LUSC 77301390 + 77301370 77301410 41 CATGTCCCCCGAGACGGGTGCGGTGAGGCTATTGGCTCAGC CATGTCCCCCGAGACGAGTGCGGTGAGGCTATTGGCTCAGC < 41bp 1 0.575319644206195 1 0.604187607765198 experiment 0.849360711587611 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301390 chr11:77301386 nonsynonymous SNV 0.428 2 17 hm5C_associated_SNPs_28742 0 0 3 DDX3X POSTAR2 ENCODE chr11:77301368-77301391
64251 chr6 27833365 27833365 1 + G T LUSC 27833345 + 27833325 27833365 41 GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCG GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCT < 41bp 1 0.371225938651321 1 0.403038859367371 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833345 chr6:27833365 nonsynonymous SNV 0.969 0 41 hm5C_associated_SNPs_28747 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833358-27833379
64251 chr22 44330490 44330490 1 + T C LUSC 44330489 + 44330469 44330509 41 GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTCGA GCTTGCTTTGCTCACAGGTGCCGGGAGAGATATGCCTTCGA < 41bp 1 0.441143261910345 1 0.683570563793182 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44330489 chr22:44330490 nonsynonymous SNV 0.123 3 22 hm5C_associated_SNPs_28749 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:44330467-44330510
64251 chr3 47882519 47882519 1 + T G LUSC 47882499 + 47882479 47882519 41 TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTATT TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTATG < 41bp 1 0.29863764504426 1 0.102620035409927 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47882499 chr3:47882519 nonsynonymous SNV 0.978 2 41 hm5C_associated_SNPs_28750 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:47882491-47882521
64251 chr11 34129835 34129835 1 + G A LUSC 34129843 + 34129823 34129863 41 AGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG AGTAGCTGAGCGACAAAGATCTCTCTTTGTTGTAGTTGGGG < 41bp 1 0.149036038243561 1 0.0933279395103455 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129843 chr11:34129835 synonymous SNV . 0 13 hm5C_associated_SNPs_28751 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34129799-34129855
64251 chr16 53524160 53524160 1 + C G LUSC 53524180 + 53524160 53524200 41 CTGCCTTATTACGCCGTCTCCAAGATGTAGCTAATGACCGT GTGCCTTATTACGCCGTCTCCAAGATGTAGCTAATGACCGT < 41bp 1 0.69409484156117 1 0.278402119874954 experiment 0.611810316877661 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53524180 chr16:53524160 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_28752 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:53524140-53524176
64251 chr20 60878660 60878660 1 + G T LUSC 60878643 + 60878623 60878663 41 GGATGACGACCTCAGGCGCGCTCTTTCCAAGCCTGGTGCCA GGATGACGACCTCAGGCGCGCTCTTTCCAAGCCTGGTTCCA < 41bp 1 0.146663540327695 1 0.0160151422023773 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60878643 chr20:60878660 synonymous SNV . 0 38 hm5C_associated_SNPs_28753 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr20:60878620-60878660
64251 chr2 32724725 32724725 1 + A G LUSC 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATGGAATCGGTTACATTTTTAGTGCACC < 41bp 1 0.048154543831035 1 0.358141601085663 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724725 nonsynonymous SNV 0.994 3 16 hm5C_associated_SNPs_28754 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:32724720-32724741
64251 chr17 37676267 37676267 1 + C T LUSC 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGTGGTGCACAGCTGAACAGACCCTACA < 41bp 1 0.194175355766236 1 0.154556840658188 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676267 nonsynonymous SNV 0.984 3 16 hm5C_associated_SNPs_28755 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr5 10411614 10411614 1 + C A LUSC 10411602 + 10411582 10411622 41 CCATACTCCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC CCATACTCCAGCAGGGAGGGCCTGTTGGCTTTAAGCCTTAC < 41bp 1 0.0803775062044949 1 0.0659275054931641 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411602 chr5:10411614 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_28756 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:10411592-10411616
64251 chr7 101892193 101892193 1 + C T LUSC 101892198 + 101892178 101892218 41 CCTTTTCGGCCTCCCCGAGGCCGCGGGCGCCCGGGACTCGC CCTTTTCGGCCTCCCTGAGGCCGCGGGCGCCCGGGACTCGC < 41bp 1 0.314808832144076 1 0.495519995689392 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101892198 chr7:101892193 synonymous SNV . 0 16 hm5C_associated_SNPs_28757 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:101892180-101892200
64251 chr19 11474848 11474848 1 + C T LUSC 11474841 + 11474821 11474861 41 TGTCTCTTTGTCTCAGGAACCCGAGGTCTGCAGGCCGCATT TGTCTCTTTGTCTCAGGAACCCGAGGTTTGCAGGCCGCATT < 41bp 1 0.488983603217972 1 0.884228348731995 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474841 chr19:11474848 nonsynonymous SNV 0.999 1 28 hm5C_associated_SNPs_28758 0 0 3 BUD13 POSTAR2 ENCODE chr19:11474807-11474870
64251 chr2 32768445 32768445 1 + C G LUSC 32768463 + 32768443 32768483 41 ATCAAGTCAGCAGTACAGACCATGTCTCCCATACCTGCCCA ATGAAGTCAGCAGTACAGACCATGTCTCCCATACCTGCCCA < 41bp 1 0.0942435461156025 1 0.220492660999298 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32768463 chr2:32768445 nonsynonymous SNV 0.992 1 3 hm5C_associated_SNPs_28759 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr2:32768431-32768466
64251 chr19 49469158 49469158 1 + C G LUSC 49469156 + 49469136 49469176 41 ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTA ACCAGCGTGGCGGCCGCGCTCTGTTCCAGGACATCAAGGTA < 41bp 1 0.462180996434863 1 0.237673819065094 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469156 chr19:49469158 synonymous SNV . 0 23 hm5C_associated_SNPs_28760 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr19 49469158 49469158 1 + C G LUSC 49469161 + 49469141 49469181 41 CGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTAACTAG CGTGGCGGCCGCGCTCTGTTCCAGGACATCAAGGTAACTAG < 41bp 1 0.707930232043787 1 0.752147912979126 experiment 0.584139535912426 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469161 chr19:49469158 synonymous SNV . 0 18 hm5C_associated_SNPs_28761 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr10 111967684 111967684 1 + G A LUSC 111967701 + 111967681 111967721 41 CCCGAGGACCCCGCTGGGGCCAAGCCCAGGTGCCCCTTCTC CCCAAGGACCCCGCTGGGGCCAAGCCCAGGTGCCCCTTCTC < 41bp 1 0.612307291675077 1 0.365791916847229 experiment 0.775385416649846 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MXI1 ENSG00000119950 CDS Human protein_coding chr10:111967701 chr10:111967684 nonsynonymous SNV 0.979 0 4 hm5C_associated_SNPs_28762 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:111967684-111967685
64251 chr16 24818014 24818014 1 + G A LUSC 24817997 + 24817977 24818017 41 CACCATCTCAGCAGCAGCCACTCCATCAGCCAGCCATGAAG CACCATCTCAGCAGCAGCCACTCCATCAGCCAGCCATAAAG < 41bp 1 0.674853262510103 1 0.972663402557373 experiment 0.650293474979793 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24817997 chr16:24818014 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_28763 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:24818014-24818015
64251 chr17 65905765 65905765 1 + A T LUSC 65905785 + 65905765 65905805 41 AATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG TATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG < 41bp 1 0.430477585224988 1 0.678572237491608 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65905785 chr17:65905765 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_28764 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr17:65905735-65905765
64251 chr19 41265392 41265392 1 + C T LUSC 41265404 + 41265384 41265424 41 GGCACCTTCGTGGAGCGGGACCGCAAGCGGGAGAAGAGGAA GGCACCTTTGTGGAGCGGGACCGCAAGCGGGAGAAGAGGAA < 41bp 1 0.436790454616598 1 0.0874173939228058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRPA ENSG00000077312 CDS Human protein_coding chr19:41265404 chr19:41265392 synonymous SNV . 0 9 hm5C_associated_SNPs_28765 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:41265341-41265407
64251 chr11 47256931 47256931 1 + C T LUSC 47256916 + 47256896 47256936 41 AGTGGGACTGCCCCCTGGGCCTGATCCCGCACCCTCACCGT AGTGGGACTGCCCCCTGGGCCTGATCCCGCACCCTTACCGT < 41bp 1 0.456013722100746 1 0.0709480941295624 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256916 chr11:47256931 nonsynonymous SNV 0.940 4 36 hm5C_associated_SNPs_28766 0 0 2 PRPF8 POSTAR2 ENCODE chr11:47256900-47257010
64251 chr5 21497230 21497230 1 + G C LUSC 21497215 + 21497195 21497235 41 TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAC TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTCAGAAC < 41bp 1 0.305293217697913 1 0.804998934268951 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21497215 chr5:21497230 . . 0 36 hm5C_associated_SNPs_28767 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:21497224-21497246
64251 chr2 211525340 211525340 1 + G T LUSC 211525357 + 211525337 211525377 41 ATTGGACCATCCCATAATTCCTGCTGACTATGTTGCAATTA ATTTGACCATCCCATAATTCCTGCTGACTATGTTGCAATTA < 41bp 1 0.298633874833015 1 0.0455035865306854 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211525357 chr2:211525340 nonsynonymous SNV 0.935 2 4 hm5C_associated_SNPs_28768 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr2:211525320-211525340
64251 chr2 42511812 42511812 1 + G C LUSC 42511809 + 42511789 42511829 41 TGACAAAATTAGGATTGCAACTGGACAGATAGCTGGCGTGG TGACAAAATTAGGATTGCAACTGCACAGATAGCTGGCGTGG < 41bp 1 0.757527292266414 1 0.641687750816345 experiment 0.484945415467172 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EML4 ENSG00000143924 CDS Human protein_coding chr2:42511809 chr2:42511812 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_28769 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr2:42511787-42511816
64251 chr18 56063416 56063416 1 + T C LUSC 56063414 + 56063394 56063434 41 TGCAGCTTTAATCGCCTTGACTTACCTCCATATGAAACCTT TGCAGCTTTAATCGCCTTGACTCACCTCCATATGAAACCTT < 41bp 1 0.107983025272107 1 0.13838467001915 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:56063414 chr18:56063416 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_28771 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:56063398-56063428
64251 chr14 39650827 39650827 1 + G T LUSC 39650825 + 39650805 39650845 41 GTAGAAGTCGGAGTAGGGGCCGGGGACATAATAGAGATAGA GTAGAAGTCGGAGTAGGGGCCGTGGACATAATAGAGATAGA < 41bp 1 0.445226145596997 1 0.761737525463104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650825 chr14:39650827 synonymous SNV . 0 23 hm5C_associated_SNPs_28773 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr14 39650827 39650827 1 + G T LUSC 39650831 + 39650811 39650851 41 GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC GTCGGAGTAGGGGCCGTGGACATAATAGAGATAGAAAGCAC < 41bp 1 0.785951496562034 1 0.19876891374588 experiment 0.428097006875932 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650831 chr14:39650827 synonymous SNV . 0 17 hm5C_associated_SNPs_28774 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr10 17277176 17277176 1 + C A LUSC 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCACTGGAACGCCAGATGCGTGAAATGGAAGA < 41bp 1 0.378437876230309 1 0.528266727924347 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277176 synonymous SNV . 0 12 hm5C_associated_SNPs_28775 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277176 17277176 1 + C A LUSC 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCACTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT < 41bp 1 0.637026744585894 1 0.258913487195969 experiment 0.725946510828213 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277176 synonymous SNV . 0 5 hm5C_associated_SNPs_28776 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277177 17277177 1 + C A LUSC 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCCATGGAACGCCAGATGCGTGA < 41bp 1 0.317919870790732 1 0.209300428628922 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277177 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_28777 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277177 17277177 1 + C A LUSC 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCCATGGAACGCCAGATGCGTGAAATGGAAGA < 41bp 1 0.391843177698134 1 0.445963084697723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277177 nonsynonymous SNV 0.993 4 13 hm5C_associated_SNPs_28778 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277177 17277177 1 + C A LUSC 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCCATGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT < 41bp 1 0.647430558412424 1 0.260730296373367 experiment 0.705138883175153 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277177 nonsynonymous SNV 0.993 4 6 hm5C_associated_SNPs_28779 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr12 118465787 118465787 1 + T A LUSC 118465804 + 118465784 118465824 41 GGGTTGGCACTGCATGATATCCTGACAGAGATACACTTGTT GGGATGGCACTGCATGATATCCTGACAGAGATACACTTGTT < 41bp 1 0.479775560931385 1 0.14996749162674 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RFC5 ENSG00000111445 CDS Human protein_coding chr12:118465804 chr12:118465787 nonsynonymous SNV 0.770 2 4 hm5C_associated_SNPs_28780 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:118465757-118465832
64251 chrX 153692007 153692007 1 + C G LUSC 153692001 + 153691981 153692021 41 GCCTGCCTGGGCTCCGGGGACCCGCACTGTGGTTGGTGTGT GCCTGCCTGGGCTCCGGGGACCCGCAGTGTGGTTGGTGTGT < 41bp 1 0.126694935521625 1 0.123307377099991 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153692001 chrX:153692007 nonsynonymous SNV 0.864 4 27 hm5C_associated_SNPs_28784 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chrX:153691985-153692029
64251 chr20 57289620 57289620 1 + G A LUSC 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCAAGACAACAGCCCCAGCTCCTGTGCTGGCCTC < 41bp 1 0.383545256203201 1 0.352464318275452 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289620 nonsynonymous SNV 0.998 4 10 hm5C_associated_SNPs_28785 0 0 2 LSM11 POSTAR2 ENCODE chr20:57289620-57289640
64251 chr11 86663299 86663299 1 - C A LUSC 86663294 - 86663274 86663314 41 CCAGGTGATGAAGAGGTGCCCTTACCTCACAAAACCCCCAT CCAGGTGATGAAGAGTTGCCCTTACCTCACAAAACCCCCAT < 41bp 1 0.168677429979489 1 0.0557084679603577 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663294 chr11:86663299 nonsynonymous SNV 0.997 0 16 hm5C_associated_SNPs_28786 0 0 5 EIF3H POSTAR2 ENCODE chr11:86663246-86663300
64251 chr11 86663299 86663299 1 - C A LUSC 86663313 - 86663293 86663333 41 CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTGCCCT CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGTTGCCCT < 41bp 1 0.738473455939083 1 0.720563530921936 experiment 0.523053088121834 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663313 chr11:86663299 nonsynonymous SNV 0.997 0 35 hm5C_associated_SNPs_28787 0 0 5 EIF3H POSTAR2 ENCODE chr11:86663246-86663300
64251 chr3 49212176 49212176 1 + G C LUSC 49212179 + 49212159 49212199 41 CCAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGT CCAATTCCATTGACAGGCGGCCGCCAGGGCAAGCTCCCGGT < 41bp 1 0.071821355432354 1 0.138374000787735 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212179 chr3:49212176 synonymous SNV . 0 18 hm5C_associated_SNPs_28788 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr3 49212176 49212176 1 + G C LUSC 49212180 + 49212160 49212200 41 CAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGTG CAATTCCATTGACAGGCGGCCGCCAGGGCAAGCTCCCGGTG < 41bp 1 0.674526883604308 1 0.363917112350464 experiment 0.650946232791385 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212180 chr3:49212176 synonymous SNV . 0 17 hm5C_associated_SNPs_28789 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr11 119206489 119206489 1 + C T LUSC 119206474 + 119206454 119206494 41 CTAGCCCTGGAGCTGCTGGCCTCAGCTGCCCGCCTCCTGGC CTAGCCCTGGAGCTGCTGGCCTCAGCTGCCCGCCTTCTGGC < 41bp 1 0.576460162076958 1 0.701206982135773 experiment 0.847079675846084 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206474 chr11:119206489 synonymous SNV . 0 36 hm5C_associated_SNPs_28790 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:119206488-119206489
64251 chr5 52096371 52096371 1 + A G LUSC 52096386 + 52096366 52096406 41 GGTACAGACAGAGTCCTCCACGGGCAGCGTGGGCAGCAACC GGTACGGACAGAGTCCTCCACGGGCAGCGTGGGCAGCAACC < 41bp 1 0.693055345245252 1 0.284496366977692 experiment 0.613889309509495 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PELO ENSG00000152684 CDS Human protein_coding chr5:52096386 chr5:52096371 nonsynonymous SNV 0.995 0 6 hm5C_associated_SNPs_28791 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:52096340-52096380
64251 chr2 217364720 217364720 1 + A G LUSC 217364705 + 217364685 217364725 41 GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCGTGAAG < 41bp 1 0.712951459230717 1 0.14524918794632 experiment 0.574097081538565 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364705 chr2:217364720 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_28792 0 0 72 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364720 217364720 1 + A G LUSC 217364733 + 217364713 217364753 41 TTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACA TTCCTGCGTGAAGACAGTGGCTGGCGGTGCCTGGACGTACA < 41bp 1 0.759217163305264 1 0.265984117984772 experiment 0.481565673389473 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364733 chr2:217364720 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_28793 0 0 72 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364720 217364720 1 + A G LUSC 217364737 + 217364717 217364757 41 TGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACAAGTG TGCGTGAAGACAGTGGCTGGCGGTGCCTGGACGTACAAGTG < 41bp 1 0.667778083923243 1 0.496348172426224 experiment 0.664443832153514 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364737 chr2:217364720 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_28794 0 0 72 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr9 137987784 137987784 1 + G A LUSC 137987790 + 137987770 137987810 41 TACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTC TACGTGGAGAAGATAGAGAACCAAATGAAAGGACTGGAGTC < 41bp 1 0.272489447607181 1 0.189847707748413 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137987790 chr9:137987784 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_28796 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:137987780-137987800
64251 chr9 137987784 137987784 1 + G A LUSC 137987791 + 137987771 137987811 41 ACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCC ACGTGGAGAAGATAGAGAACCAAATGAAAGGACTGGAGTCC < 41bp 1 0.325579898107559 1 0.547200918197632 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137987791 chr9:137987784 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_28797 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:137987780-137987800
64251 chr8 145150845 145150845 1 + C A LUSC 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTAGGCTG < 41bp 1 0.481624729738071 1 0.407492697238922 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150845 stopgain 0.941 0 36 hm5C_associated_SNPs_28801 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145150832-145150868
64251 chr3 126751332 126751332 1 + G C LUSC 126751338 + 126751318 126751358 41 TCGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACCTC TCGGTGGTGGCCCACACCTTCATGGACTCCTGCTCCACCTC < 41bp 1 0.358157120133248 1 0.306935846805573 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751338 chr3:126751332 nonsynonymous SNV 0.997 4 15 hm5C_associated_SNPs_28803 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:126751309-126751341
64251 chr12 72274315 72274315 1 + C G LUSC 72274307 + 72274287 72274327 41 AGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACG AGAAAGAGGTCATCGAGGATCAGAACATGTGAACAGTTACG < 41bp 1 0.721169790601937 1 0.627143204212189 experiment 0.557660418796126 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72274307 chr12:72274315 nonsynonymous SNV 0.979 0 29 hm5C_associated_SNPs_28804 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72274235-72274335
64251 chr22 24560512 24560512 1 + C A LUSC 24560499 + 24560479 24560519 41 AGCACCCTGCTGAAGGTGTCCTCCATGCTTCAGCGGACCCC AGCACCCTGCTGAAGGTGTCCTCCATGCTTCAGAGGACCCC < 41bp 1 0.714341618544362 1 0.911722004413605 experiment 0.571316762911277 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24560499 chr22:24560512 synonymous SNV . 0 34 hm5C_associated_SNPs_28805 0 0 1 EIF3H POSTAR2 ENCODE chr22:24560508-24560527
64251 chr19 14561819 14561819 1 + G A LUSC 14561839 + 14561819 14561859 41 GAAGAGCTCGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG AAAGAGCTCGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG < 41bp 1 0.627342048651754 1 0.346896767616272 experiment 0.745315902696492 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561839 chr19:14561819 nonsynonymous SNV 0.694 2 1 hm5C_associated_SNPs_28807 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14561792-14561822
64251 chr8 25323754 25323754 1 + G T LUSC 25323752 + 25323732 25323772 41 ACGAATATCAGCCTTCCAGTCAGCTTTTCACTCCATAAAGG ACGAATATCAGCCTTCCAGTCATCTTTTCACTCCATAAAGG < 41bp 1 0.101758552045022 1 0.120782822370529 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25323752 chr8:25323754 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_28808 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:25323710-25323767
64251 chr20 43545460 43545460 1 + G T LUSC 43545459 + 43545439 43545479 41 CATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC CATTTTGAGACCCATGAGGCCTCACAGCAGGCCATCAACAC < 41bp 1 0.198485251841933 1 0.0210385918617249 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545459 chr20:43545460 nonsynonymous SNV 0.062 4 22 hm5C_associated_SNPs_28812 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:43545440-43545460
64251 chr8 25323755 25323755 1 + C A LUSC 25323752 + 25323732 25323772 41 ACGAATATCAGCCTTCCAGTCAGCTTTTCACTCCATAAAGG ACGAATATCAGCCTTCCAGTCAGATTTTCACTCCATAAAGG < 41bp 1 0.248066139363682 1 0.474291384220123 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25323752 chr8:25323755 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_28813 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:25323710-25323767
64251 chr6 110059612 110059612 1 + G A LUSC 110059608 + 110059588 110059628 41 ATATAATTAAAAGTACTGTGCATCGTGACTGGCTTTTGTAT ATATAATTAAAAGTACTGTGCATCATGACTGGCTTTTGTAT < 41bp 1 0.157109209778778 1 0.0423125028610229 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FIG4 ENSG00000112367 CDS Human protein_coding chr6:110059608 chr6:110059612 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_28816 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:110059569-110059658
64251 chr6 27101012 27101012 1 + G A LUSC 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG AGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG < 41bp 1 0.581861967371103 1 0.757267832756042 experiment 0.836276065257795 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101012 synonymous SNV . 0 1 hm5C_associated_SNPs_28817 0 0 42 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr6 130381241 130381241 1 + G T LUSC 130381222 + 130381202 130381242 41 AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGA AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGTA < 41bp 1 0.525213394661833 1 0.239803284406662 experiment 0.949573210676334 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381222 chr6:130381241 nonsynonymous SNV 0.858 4 40 hm5C_associated_SNPs_28818 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr6 168363186 168363186 1 + G A LUSC 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAAGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG < 41bp 1 0.259682052764914 1 0.541389644145966 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363186 nonsynonymous SNV 0.017 1 5 hm5C_associated_SNPs_28819 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221666 chr6:168363180-168363200
64251 chr5 179153748 179153748 1 + A G LUSC 179153756 + 179153736 179153776 41 GGAAGACAGAAAACCTAAAGCAGAGGTAAAGGAAAGGGGTC GGAAGACAGAAAGCCTAAAGCAGAGGTAAAGGAAAGGGGTC < 41bp 1 0.759197064232694 1 0.814807772636414 experiment 0.481605871534611 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179153756 chr5:179153748 synonymous SNV . 0 13 hm5C_associated_SNPs_28820 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:179153687-179153752
64251 chr1 55524240 55524240 1 + G A LUSC 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGGCCACAGCCGTCACCCGCTGCGCCCCAG < 41bp 1 0.108686586603327 1 0.130664527416229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524240 nonsynonymous SNV 0.003 2 26 hm5C_associated_SNPs_28821 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524240 55524240 1 + G A LUSC 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGGCCACAGCCGTCACCCGCTGCGCCCCAGA < 41bp 1 0.661750148321785 1 0.413445472717285 experiment 0.676499703356431 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524240 nonsynonymous SNV 0.003 2 25 hm5C_associated_SNPs_28822 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr6 26124559 26124559 1 + C T LUSC 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCCGAGTGCACCGTCTGCTCCGTAAAGGCAA < 41bp 1 0.394717779917227 1 0.0895547568798065 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124559 synonymous SNV . 0 24 hm5C_associated_SNPs_28823 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26124400-26124560
64251 chr22 32881142 32881142 1 + G A LUSC 32881149 + 32881129 32881169 41 TCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGC TCCTCTCTGCGAGAGCAGCTCCGCTACTCTCACCTGTGTGC < 41bp 1 0.39714249794176 1 0.109522312879562 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881149 chr22:32881142 nonsynonymous SNV 0.942 1 14 hm5C_associated_SNPs_28824 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr5 10411589 10411589 1 + C T LUSC 10411587 + 10411567 10411607 41 ATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGGCCTGTT ATGCAGCCCACCAAGCCATACTTCAGCAGGGAGGGCCTGTT < 41bp 1 0.506221522037827 1 0.290201544761658 experiment 0.987556955924346 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411587 chr5:10411589 synonymous SNV . 0 23 hm5C_associated_SNPs_28825 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221660 chr5:10411589-10411590
64251 chr5 10411589 10411589 1 + C T LUSC 10411602 + 10411582 10411622 41 CCATACTCCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC CCATACTTCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC < 41bp 1 0.101171279053879 1 0.0533475577831268 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411602 chr5:10411589 synonymous SNV . 0 8 hm5C_associated_SNPs_28826 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221660 chr5:10411589-10411590
64251 chr16 22271802 22271802 1 + C T LUSC 22271796 + 22271776 22271816 41 TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAACATGGC TGCCCAGATTGGCCAGTGTTCAGTGATCTCGATAACATGGC < 41bp 1 0.405819127709882 1 0.428472995758057 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22271796 chr16:22271802 synonymous SNV . 0 27 hm5C_associated_SNPs_28827 0 0 3 DDX24 POSTAR2 ENCODE chr16:22271802-22271841
64251 chr1 218458675 218458675 1 + C T LUSC 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCGCTCTGGACTCACGTG < 41bp 1 0.287311282873369 1 0.149547934532166 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458675 nonsynonymous SNV 0.000 0 30 hm5C_associated_SNPs_28828 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chrX 73046929 73046929 1 - G T LUSC 73046915 - 73046895 73046935 41 AGAAGGCCCAAAGTATAAGACAGATGGTTTGAGACTTGAGA AGAAGGACCAAAGTATAAGACAGATGGTTTGAGACTTGAGA < 41bp 1 0.198331327339369 1 0.405668944120407 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046915 chrX:73046929 . . 0 7 hm5C_associated_SNPs_28835 0 0 69 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr5 10417441 10417441 1 + G C LUSC 10417426 + 10417406 10417446 41 GTGCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCT GTGCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGCCTCCT < 41bp 1 0.180667778000797 1 0.148254930973053 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10417426 chr5:10417441 synonymous SNV . 0 36 hm5C_associated_SNPs_28838 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:10417411-10417449
64251 chr5 10417441 10417441 1 + G C LUSC 10417428 + 10417408 10417448 41 GCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGGCTCCTGT GCTGTTGGCTGGAGTTGTCCCTCTCCTTCTGGGCCTCCTGT < 41bp 1 0.276218453880259 1 0.0991118848323822 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10417428 chr5:10417441 synonymous SNV . 0 34 hm5C_associated_SNPs_28839 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:10417411-10417449
64251 chr11 94554932 94554932 1 + G C LUSC 94554949 + 94554929 94554969 41 ACCGGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT ACCCGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT < 41bp 1 0.322952717085408 1 0.0810353755950928 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94554949 chr11:94554932 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_28840 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:94554918-94554952
64251 chr5 140789620 140789620 1 + C T LUSC 140789623 + 140789603 140789643 41 AGTGAGCCCGGACTCTTCAGCCTGGGGCTGCGCACTGGGGA AGTGAGCCCGGACTCTTTAGCCTGGGGCTGCGCACTGGGGA < 41bp 1 0.354050436180431 1 0.284069061279297 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB6 ENSG00000253305 CDS Human protein_coding chr5:140789623 chr5:140789620 synonymous SNV . 0 18 hm5C_associated_SNPs_28841 0 0 1 QKI POSTAR2 GSE21578,GSM545211 chr5:140789613-140789645
64251 chr19 39398189 39398189 1 + C G LUSC 39398207 + 39398187 39398227 41 ACCCCATCCTCGCCCGCCTCCTCCGTGCACACGGAGCCCCT ACGCCATCCTCGCCCGCCTCCTCCGTGCACACGGAGCCCCT < 41bp 1 0.797705128085587 1 0.684178054332733 experiment 0.404589743828825 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398207 chr19:39398189 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_28842 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39398171-39398202
64251 chr19 41306706 41306706 1 + C T LUSC 41306701 + 41306681 41306721 41 CACCTCTACCACTGCCAGCCCTCTTCGGGACGGTTTTGGCG CACCTCTACCACTGCCAGCCCTCTTTGGGACGGTTTTGGCG < 41bp 1 0.162557195921336 1 0.722496867179871 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306701 chr19:41306706 nonsynonymous SNV 0.973 1 26 hm5C_associated_SNPs_28843 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:41306673-41306706
64251 chr6 160448238 160448238 1 + C G LUSC 160448218 + 160448198 160448238 41 TGTAATACATGATTTTCAGACACACTACGAGACCCAGGTTC TGTAATACATGATTTTCAGACACACTACGAGACCCAGGTTG < 41bp 1 0.11560686549958 1 0.166890859603882 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160448218 chr6:160448238 stopgain 0.019 0 41 hm5C_associated_SNPs_28845 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:160448238-160448239
64251 chrX 70674030 70674030 1 + T A LUSC 70674049 + 70674029 70674069 41 GTCAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGT GACAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGT < 41bp 1 0.569987763409717 1 0.853201925754547 experiment 0.860024473180566 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF1 ENSG00000147133 CDS Human protein_coding chrX:70674049 chrX:70674030 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_28847 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:70674025-70674051
64251 chr20 368895 368895 1 + C T LUSC 368903 + 368883 368923 41 GAGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTAC GAGGAGGGCGGGTGGGCCTACCAGGCCCTGCACTGCCCTAC < 41bp 1 0.70660847078521 1 0.842365562915802 experiment 0.58678305842958 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368903 chr20:368895 nonsynonymous SNV 0.001 2 13 hm5C_associated_SNPs_28848 0 0 5 DDX6 POSTAR2 ENCODE chr20:368834-368898
64251 chr20 368895 368895 1 + C T LUSC 368904 + 368884 368924 41 AGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTACA AGGAGGGCGGGTGGGCCTACCAGGCCCTGCACTGCCCTACA < 41bp 1 0.796786931844033 1 0.951438784599304 experiment 0.406426136311933 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368904 chr20:368895 nonsynonymous SNV 0.001 2 12 hm5C_associated_SNPs_28849 0 0 5 DDX6 POSTAR2 ENCODE chr20:368834-368898
64251 chr5 32090150 32090150 1 + G C LUSC 32090135 + 32090115 32090155 41 ATCAAGCCTGATGTCAGACTCCCGAGGGGTGCCCAGAAACA ATCAAGCCTGATGTCAGACTCCCGAGGGGTGCCCACAAACA < 41bp 1 0.355587149639685 1 0.596982538700104 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32090135 chr5:32090150 nonsynonymous SNV 0.001 1 36 hm5C_associated_SNPs_28851 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:32090121-32090156
64251 chr5 32090150 32090150 1 + G C LUSC 32090136 + 32090116 32090156 41 TCAAGCCTGATGTCAGACTCCCGAGGGGTGCCCAGAAACAG TCAAGCCTGATGTCAGACTCCCGAGGGGTGCCCACAAACAG < 41bp 1 0.113061809168235 1 0.565292119979858 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32090136 chr5:32090150 nonsynonymous SNV 0.001 1 35 hm5C_associated_SNPs_28852 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:32090121-32090156
64251 chr5 32090150 32090150 1 + G C LUSC 32090137 + 32090117 32090157 41 CAAGCCTGATGTCAGACTCCCGAGGGGTGCCCAGAAACAGC CAAGCCTGATGTCAGACTCCCGAGGGGTGCCCACAAACAGC < 41bp 1 0.256369596622665 1 0.781676530838013 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32090137 chr5:32090150 nonsynonymous SNV 0.001 1 34 hm5C_associated_SNPs_28853 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:32090121-32090156
64251 chr5 32090150 32090150 1 + G C LUSC 32090169 + 32090149 32090189 41 AGAAACAGCATTCCAGGGGGCCCCTCGGGGGAGGACCATCT ACAAACAGCATTCCAGGGGGCCCCTCGGGGGAGGACCATCT < 41bp 1 0.0303179768179239 1 0.0439543724060059 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32090169 chr5:32090150 nonsynonymous SNV 0.001 1 2 hm5C_associated_SNPs_28854 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:32090121-32090156
64251 chr11 73941323 73941323 1 + G T LUSC 73941327 + 73941307 73941347 41 TTGAAGCCATGTATGGGGACCTTCCTCCTCCAATTATGCTG TTGAAGCCATGTATGGTGACCTTCCTCCTCCAATTATGCTG < 41bp 1 0.0922773158296111 1 0.0301957130432129 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PPME1 ENSG00000214517 CDS Human protein_coding chr11:73941327 chr11:73941323 synonymous SNV . 0 17 hm5C_associated_SNPs_28855 0 0 5 DDX24 POSTAR2 ENCODE chr11:73941309-73941410
64251 chr9 139733466 139733466 1 + C T LUSC 139733467 + 139733447 139733487 41 CGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATCACTCTT CGCTGCCTGCAGGCCCCGTTCCCAGTCAAGACATCACTCTT < 41bp 1 0.240370180991687 1 0.168876767158508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139733467 chr9:139733466 synonymous SNV . 0 20 hm5C_associated_SNPs_28858 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139733459-139733490
64251 chr19 19638849 19638849 1 + G T LUSC 19638852 + 19638832 19638872 41 TCCACACAACCCGCTGGGTGCCCCCCTTGATCGGGGAGCTG TCCACACAACCCGCTGGTTGCCCCCCTTGATCGGGGAGCTG < 41bp 1 0.185788000397514 1 0.025438517332077 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638852 chr19:19638849 nonsynonymous SNV 0.428 2 18 hm5C_associated_SNPs_28861 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr12 57906114 57906114 1 + G A LUSC 57906095 + 57906075 57906115 41 TCCTTGCTCAGCCCTAGGAGCTGAGGATAACTATACCTTGG TCCTTGCTCAGCCCTAGGAGCTGAGGATAACTATACCTTAG < 41bp 1 0.551353568465031 1 0.366989970207214 experiment 0.897292863069938 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57906095 chr12:57906114 synonymous SNV . 0 40 hm5C_associated_SNPs_28862 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr12:57906049-57906131
64251 chr15 66777515 66777515 1 + G T LUSC 66777521 + 66777501 66777541 41 GCCAAGGACCCCCGGGAGGCCCCTTAGCTGTGAGTAGCCTG GCCAAGGACCCCCGTGAGGCCCCTTAGCTGTGAGTAGCCTG < 41bp 1 0.159368500529484 1 0.0420305728912354 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66777521 chr15:66777515 nonsynonymous SNV 0.888 2 15 hm5C_associated_SNPs_28863 0 0 2 PRPF8 POSTAR2 ENCODE chr15:66777495-66777573
64251 chr17 57754397 57754397 1 + A G LUSC 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG GTCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG < 41bp 1 0.270781997843635 1 0.141256004571915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754397 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_28865 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:57754380-57754400
64251 chr7 44797501 44797501 1 + G C LUSC 44797498 + 44797478 44797518 41 TTCTGCAGCATGGAGGTCCCCGGGGGCCTAGTGTCCCCGCT TTCTGCAGCATGGAGGTCCCCGGCGGCCTAGTGTCCCCGCT < 41bp 1 0.788733639881204 1 0.808510899543762 experiment 0.422532720237593 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44797498 chr7:44797501 nonsynonymous SNV 0.335 4 24 hm5C_associated_SNPs_28868 0 0 6 BUD13 POSTAR2 ENCODE chr7:44797497-44797514
64251 chr16 89789782 89789782 1 + A C LUSC 89789767 + 89789747 89789787 41 CCTGCCCCACCTTCAGAGGACACTGTCCTCCGAGTACTGCG CCTGCCCCACCTTCAGAGGACACTGTCCTCCGAGTCCTGCG < 41bp 1 0.345458043116205 1 0.0222293734550476 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789767 chr16:89789782 nonsynonymous SNV 0.719 3 36 hm5C_associated_SNPs_28870 0 0 1 GRWD1 POSTAR2 ENCODE chr16:89789778-89789841
64251 chr1 76253234 76253234 1 + T C LUSC 76253245 + 76253225 76253265 41 ACACTTTGTTATTGGAGAAACATGCAGATTATATCGCATCC ACACTTTGTCATTGGAGAAACATGCAGATTATATCGCATCC < 41bp 1 0.325650325662561 1 0.342195987701416 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76253245 chr1:76253234 nonsynonymous SNV 0.171 1 10 hm5C_associated_SNPs_28871 0 0 35 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:76253074-76253815
64251 chr11 134244114 134244114 1 + C T LUSC 134244119 + 134244099 134244139 41 GGGTAGCTTGTCCATCAGCTCCACCCCTTGTGACACCTTTC GGGTAGCTTGTCCATTAGCTCCACCCCTTGTGACACCTTTC < 41bp 1 0.0467634598487645 1 0.0543158650398254 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134244119 chr11:134244114 synonymous SNV . 0 16 hm5C_associated_SNPs_28880 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:134244112-134244133
64251 chr6 107824935 107824935 1 + G C LUSC 107824953 + 107824933 107824973 41 GAGGATATTGAATTCAGGAGCTACCCTACAGATGGGGAGAG GACGATATTGAATTCAGGAGCTACCCTACAGATGGGGAGAG < 41bp 1 0.130149477240933 1 0.221783071756363 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOBP ENSG00000112320 CDS Human protein_coding chr6:107824953 chr6:107824935 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_28882 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:107824905-107824975
64251 chrX 128722174 128722174 1 + C T LUSC 128722162 + 128722142 128722182 41 GACTTCTTTGGTAGGAGGACCTGTTCCAGACCCCTGGAATG GACTTCTTTGGTAGGAGGACCTGTTCCAGACCTCTGGAATG < 41bp 1 0.107020779727766 1 0.0611771047115326 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128722162 chrX:128722174 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_28883 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:128722156-128722189
64251 chr1 156756576 156756576 1 + T C LUSC 156756587 + 156756567 156756607 41 TCTTGCCCCTGTTGTGGGCACCACAACCACCACTCCGTCGC TCTTGCCCCCGTTGTGGGCACCACAACCACCACTCCGTCGC < 41bp 1 0.482891280351914 1 0.0759349465370178 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756587 chr1:156756576 synonymous SNV . 0 10 hm5C_associated_SNPs_28884 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156756540-156756580
64251 chr1 156756576 156756576 1 + T C LUSC 156756593 + 156756573 156756613 41 CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG CCCCGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG < 41bp 1 0.180129096000958 1 0.145755171775818 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756593 chr1:156756576 synonymous SNV . 0 4 hm5C_associated_SNPs_28885 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156756540-156756580
64251 chr1 156756576 156756576 1 + T C LUSC 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA CGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA < 41bp 1 0.221083574843053 1 0.191990375518799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756576 synonymous SNV . 0 1 hm5C_associated_SNPs_28886 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156756540-156756580
64251 chr12 56075807 56075807 1 + C A LUSC 56075823 + 56075803 56075843 41 CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATCCCCA CCACAGGGCTGCAGGGTCACCTGCCTAGACCCAAATCCCCA < 41bp 1 0.480564087834779 1 0.0653408765792847 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075823 chr12:56075807 nonsynonymous SNV 0.902 0 5 hm5C_associated_SNPs_28887 0 0 2 RPS3 POSTAR2 ENCODE chr12:56075778-56075831
64251 chr19 21300974 21300974 1 + C T LUSC 21300990 + 21300970 21301010 41 AATTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA AATTTAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA < 41bp 1 0.352609149925249 1 0.108564257621765 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300990 chr19:21300974 stopgain 0.006 0 5 hm5C_associated_SNPs_28888 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300974 21300974 1 + C T LUSC 21300992 + 21300972 21301012 41 TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT TTTAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT < 41bp 1 0.293607044684408 1 0.116174429655075 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300992 chr19:21300974 stopgain 0.006 0 3 hm5C_associated_SNPs_28889 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300975 21300975 1 + A G LUSC 21300990 + 21300970 21301010 41 AATTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA AATTCGGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA < 41bp 1 0.382891025208617 1 0.0984289944171906 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300990 chr19:21300975 nonsynonymous SNV 0.007 0 6 hm5C_associated_SNPs_28890 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr19 21300975 21300975 1 + A G LUSC 21300992 + 21300972 21301012 41 TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT TTCGGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT < 41bp 1 0.270644431482821 1 0.0822239518165588 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300992 chr19:21300975 nonsynonymous SNV 0.007 0 4 hm5C_associated_SNPs_28891 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:21300959-21300986
64251 chr3 127379397 127379397 1 + G C LUSC 127379412 + 127379392 127379432 41 AGAAGGAAGAGGTAGAGAAACAAGAGGAGGAGGAAGAGGAG AGAAGCAAGAGGTAGAGAAACAAGAGGAGGAGGAAGAGGAG < 41bp 1 0.782794999844619 1 0.668066263198853 experiment 0.434410000310761 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379412 chr3:127379397 nonsynonymous SNV 0.598 0 6 hm5C_associated_SNPs_28894 0 0 1 AGGF1 POSTAR2 ENCODE chr3:127379371-127379542
64251 chr5 6746348 6746348 1 + C T LUSC 6746347 + 6746327 6746367 41 TTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT TTGCATCCAAGAATTGATGCCTGGAGAGCTGATGAAAACCT < 41bp 1 0.672736492502712 1 0.436759859323502 experiment 0.654527014994576 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746347 chr5:6746348 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_28895 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr5:6746337-6746390
64251 chr17 65722740 65722740 1 + G T LUSC 65722746 + 65722726 65722766 41 ACGTCGCAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT ACGTCGCAGTCCTATGAAGTCCACTAGCAGCTTCTAAGGGT < 41bp 1 0.422306165745166 1 0.132285118103027 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722746 chr17:65722740 stopgain 0.328 1 15 hm5C_associated_SNPs_28896 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65722634-65722747
64251 chr6 139487474 139487474 1 + G C LUSC 139487463 + 139487443 139487483 41 GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACG GATCTGCAGCTTCGGTAGGCCGGTGGACCTGCAGAAGGACG < 41bp 1 0.539541058431216 1 0.425220668315887 experiment 0.920917883137567 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139487463 chr6:139487474 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_28897 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:139487451-139487476
64251 chr1 164789349 164789349 1 + G T LUSC 164789352 + 164789332 164789372 41 TCAAACTCTGGAGATTTGTTCATGAGCGTGCAGTCACTCAA TCAAACTCTGGAGATTTTTTCATGAGCGTGCAGTCACTCAA < 41bp 1 0.696878033424916 1 0.351151257753372 experiment 0.606243933150169 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164789352 chr1:164789349 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_28898 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr1:164789349-164789350
64251 chr11 65267660 65267660 1 + A G LUSC 65267647 + 65267627 65267667 41 TCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAAC TCAAAAAGCTACTAAAAGGACTGGTGTAATTTAGAAAAAAC < 41bp 1 0.502765088538228 1 0.128970414400101 experiment 0.994469822923544 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267647 chr11:65267660 . . 0 34 hm5C_associated_SNPs_28899 0 0 82 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267640-65267680
64251 chr2 71577120 71577120 1 + A T LUSC 71577126 + 71577106 71577146 41 TAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAA TAATTTCATCTGTATGCCAGCAAGAGCGGATCCCACATGAA < 41bp 1 0.511658745044561 1 0.680720388889313 experiment 0.976682509910878 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71577126 chr2:71577120 nonsynonymous SNV 0.846 2 15 hm5C_associated_SNPs_28900 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:71576926-71577160
64251 chr13 27847425 27847425 1 + G C LUSC 27847416 + 27847396 27847436 41 TAGCCAATGAGCTGGGCAGCCTGTTCCTTGAAATTTCCACT TAGCCAATGAGCTGGGCAGCCTGTTCCTTCAAATTTCCACT < 41bp 1 0.210012306873253 1 0.050396591424942 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RASL11A ENSG00000122035 CDS Human protein_coding chr13:27847416 chr13:27847425 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_28901 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:27847399-27847434
64251 chr1 28861645 28861645 1 + A G LUSC 28861637 + 28861617 28861657 41 TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCA TGCAGGTGCAGCTGGATGTGCCTGTGGTGAAGGTGGCCTCA < 41bp 1 0.291721331519084 1 0.131896913051605 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861637 chr1:28861645 synonymous SNV . 0 29 hm5C_associated_SNPs_28902 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28861595-28861645
64251 chr12 101674928 101674928 1 + A T LUSC 101674915 + 101674895 101674935 41 TTCTTACATTTGCTGAACGACTGGGGAATGTTAATATTGAT TTCTTACATTTGCTGAACGACTGGGGAATGTTATTATTGAT < 41bp 1 0.385056135464882 1 0.23149362206459 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674915 chr12:101674928 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_28903 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:101674897-101674935
64251 chr14 104642774 104642774 1 + G A LUSC 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTCCCCCGGAAACCGAGGACTACCTCTGCCACCACCCGTG < 41bp 1 0.12666823652851 1 0.0696835219860077 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642774 nonsynonymous SNV 0.014 0 23 hm5C_associated_SNPs_28905 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104642723-104642789
64251 chr20 39741497 39741497 1 + C A LUSC 39741484 + 39741464 39741504 41 AAAAAATGTGTGGACAAGATCCGGAACCAGTATCGAGAAGA AAAAAATGTGTGGACAAGATCCGGAACCAGTATAGAGAAGA < 41bp 1 0.720380436987841 1 0.292943894863129 experiment 0.559239126024317 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741484 chr20:39741497 synonymous SNV . 0 34 hm5C_associated_SNPs_28906 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39741466-39741505
64251 chr17 17698002 17698002 1 + G T LUSC 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGCCTACACGGCAGTCTGCCTCTCGACAGCTTCTCCAAG < 41bp 1 0.0151472961566289 1 0.00691184401512146 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17698002 synonymous SNV . 0 23 hm5C_associated_SNPs_28908 1 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697983-17698008
64251 chr11 63719960 63719960 1 + G T LUSC 63719969 + 63719949 63719989 41 TACCTCATCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT TACCTCATCGCTTGGGAAAACAGCTCCGTCCCTGTTGCCTT < 41bp 1 0.575934282694542 1 0.571203827857971 experiment 0.848131434610916 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719969 chr11:63719960 synonymous SNV . 0 12 hm5C_associated_SNPs_28909 0 0 3 GRWD1 POSTAR2 ENCODE chr11:63719953-63720040
64251 chr19 44341220 44341220 1 + A T LUSC 44341234 + 44341214 44341254 41 ACATTCAGGGATGTGGCCATCGACTTCTCTCAGGAGGAGTG ACATTCTGGGATGTGGCCATCGACTTCTCTCAGGAGGAGTG < 41bp 1 0.448859878452998 1 0.126212120056152 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44341234 chr19:44341220 nonsynonymous SNV 0.999 3 7 hm5C_associated_SNPs_28910 0 0 1 GRWD1 POSTAR2 ENCODE chr19:44341212-44341367
64251 chr3 47374703 47374703 1 + C T LUSC 47374698 + 47374678 47374718 41 ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGCTGCTG ACGACCGGGAGCAGAGGGGTCCCTATCTGCCTGAGCTGCTG < 41bp 1 0.397797878317732 1 0.123991638422012 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374698 chr3:47374703 synonymous SNV . 0 26 hm5C_associated_SNPs_28913 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47374689-47374722
64251 chr12 69119569 69119569 1 + C T LUSC 69119560 + 69119540 69119580 41 ATAGTTCAAAAGTTTCTTATCCTGGGAGACATTGATGGTAA ATAGTTCAAAAGTTTCTTATCCTGGGAGATATTGATGGTAA < 41bp 1 0.32672629320843 1 0.476724594831467 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69119560 chr12:69119569 synonymous SNV . 0 30 hm5C_associated_SNPs_28914 0 0 1 UCHL5 POSTAR2 ENCODE chr12:69119556-69119573
64251 chr10 70506929 70506929 1 + G T LUSC 70506935 + 70506915 70506955 41 CAGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAG CAGTGCTGTCAAAGTGAAAACCCCCCAAGTAGGTGACAGAG < 41bp 1 0.138417109890292 1 0.210924953222275 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506935 chr10:70506929 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_28915 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506929 70506929 1 + G T LUSC 70506936 + 70506916 70506956 41 AGTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGT AGTGCTGTCAAAGTGAAAACCCCCCAAGTAGGTGACAGAGT < 41bp 1 0.142864042600363 1 0.208108872175217 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506936 chr10:70506929 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_28916 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506929 70506929 1 + G T LUSC 70506937 + 70506917 70506957 41 GTGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGTA GTGCTGTCAAAGTGAAAACCCCCCAAGTAGGTGACAGAGTA < 41bp 1 0.493439383748196 1 0.338229566812515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506937 chr10:70506929 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_28917 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr10 70506929 70506929 1 + G T LUSC 70506938 + 70506918 70506958 41 TGCTGTCAAAGGGAAAACCCCCCAAGTAGGTGACAGAGTAT TGCTGTCAAAGTGAAAACCCCCCAAGTAGGTGACAGAGTAT < 41bp 1 0.308670706701291 1 0.231115907430649 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70506938 chr10:70506929 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_28918 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70506915-70506959
64251 chr5 61778973 61778973 1 + A G LUSC 61778983 + 61778963 61779003 41 TACTCCTCTAATTCAGAGATCACTGGAATTTTCTGTAAGCT TACTCCTCTAGTTCAGAGATCACTGGAATTTTCTGTAAGCT < 41bp 1 0.141757912971107 1 0.13109016418457 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO11 ENSG00000086200 CDS Human protein_coding chr5:61778983 chr5:61778973 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_28919 0 0 26 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:61778927-61778975
64251 chr10 45486409 45486409 1 + A G LUSC 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAAAATTGAAAGACTGC < 41bp 1 0.0707743945620296 1 0.274621546268463 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486409 synonymous SNV . 0 32 hm5C_associated_SNPs_28920 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr1 183495745 183495745 1 + G A LUSC 183495750 + 183495730 183495770 41 GTTATTACAAGAACTGTGTACAGTATTTAATGTAGATTTAC GTTATTACAAGAACTATGTACAGTATTTAATGTAGATTTAC < 41bp 1 0.237994767328959 1 0.0442043542861938 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183495750 chr1:183495745 synonymous SNV . 0 16 hm5C_associated_SNPs_28922 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:183495737-183495771
64251 chr20 13765839 13765839 1 + G A LUSC 13765830 + 13765810 13765850 41 TGTCTCTCCCCGCGGTAGCACCTCGCCCAGAACCCTGAATA TGTCTCTCCCCGCGGTAGCACCTCGCCCAAAACCCTGAATA < 41bp 1 0.176688150519688 1 0.419313848018646 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13765830 chr20:13765839 nonsynonymous SNV 0.917 0 30 hm5C_associated_SNPs_28923 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:13765828-13765863
64251 chr7 155090172 155090172 1 + G T LUSC 155090181 + 155090161 155090201 41 GCTGACCCCGCGCCCAGGGGCCGCAGTGCTGCGATGAGCGG GCTGACCCCGCTCCCAGGGGCCGCAGTGCTGCGATGAGCGG < 41bp 1 0.778940029863309 1 0.215897113084793 experiment 0.442119940273383 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090181 chr7:155090172 synonymous SNV . 0 12 hm5C_associated_SNPs_28924 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:155090160-155090200
64251 chr7 155090172 155090172 1 + G T LUSC 155090182 + 155090162 155090202 41 CTGACCCCGCGCCCAGGGGCCGCAGTGCTGCGATGAGCGGC CTGACCCCGCTCCCAGGGGCCGCAGTGCTGCGATGAGCGGC < 41bp 1 0.762638924970793 1 0.43223512172699 experiment 0.474722150058414 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090182 chr7:155090172 synonymous SNV . 0 11 hm5C_associated_SNPs_28925 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:155090160-155090200
64251 chr6 158900915 158900915 1 + A T LUSC 158900920 + 158900900 158900940 41 CAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGT CAGCAGGCCATCGCCTGCACCTTGCGTGAGGACAAGGACGT < 41bp 1 0.194965633727598 1 0.160855889320374 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158900920 chr6:158900915 nonsynonymous SNV 0.990 3 16 hm5C_associated_SNPs_28926 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:158900914-158900946
64251 chrX 107834432 107834432 1 + C T LUSC 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCTTGGCCCTGCT < 41bp 1 0.57106165187454 1 0.940315723419189 experiment 0.85787669625092 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834432 nonsynonymous SNV 0.993 4 31 hm5C_associated_SNPs_28927 0 0 2 PPIG POSTAR2 ENCODE chrX:107834381-107834439
64251 chrX 153695768 153695768 1 + C T LUSC 153695748 + 153695728 153695768 41 TTTACCTACTACCCTGATCCCAGCTTTGAGCCGCTGGGGCC TTTACCTACTACCCTGATCCCAGCTTTGAGCCGCTGGGGCT < 41bp 1 0.339652498561465 1 0.528595685958862 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153695748 chrX:153695768 nonsynonymous SNV 0.943 3 41 hm5C_associated_SNPs_28928 0 0 4 DDX24 POSTAR2 ENCODE chrX:153695745-153695789
64251 chr8 95835787 95835787 1 + C G LUSC 95835768 + 95835748 95835788 41 AGGAGTCACTGTTGGAGAAACATCTGCGCAAGCCCTGCCCG AGGAGTCACTGTTGGAGAAACATCTGCGCAAGCCCTGCCGG < 41bp 1 0.514875316969019 1 0.268403679132462 experiment 0.970249366061962 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95835768 chr8:95835787 nonsynonymous SNV 0.866 3 40 hm5C_associated_SNPs_28930 0 0 4 DDX24 POSTAR2 ENCODE chr8:95835732-95835790
64251 chr15 36989572 36989572 1 + G T LUSC 36989552 + 36989532 36989572 41 GTCATGAGCATGAGGTCCTGCTGAGAGACTTGCTTCTAGAG GTCATGAGCATGAGGTCCTGCTGAGAGACTTGCTTCTAGAT < 41bp 1 0.542854910516985 1 0.241732448339462 experiment 0.914290178966031 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989552 chr15:36989572 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_28931 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989560 + 36989540 36989580 41 CATGAGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAACCT CATGAGGTCCTGCTGAGAGACTTGCTTCTAGATAAAAACCT < 41bp 1 0.255462002220069 1 0.164388358592987 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989560 chr15:36989572 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_28932 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989564 + 36989544 36989584 41 AGGTCCTGCTGAGAGACTTGCTTCTAGAGAAAAACCTGTCC AGGTCCTGCTGAGAGACTTGCTTCTAGATAAAAACCTGTCC < 41bp 1 0.163233835577817 1 0.0589678883552551 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989564 chr15:36989572 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_28933 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989578 + 36989558 36989598 41 GACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTA GACTTGCTTCTAGATAAAAACCTGTCCTTCCTAGGTAAGTA < 41bp 1 0.109345230365198 1 0.0820868909358978 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989578 chr15:36989572 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_28934 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989579 + 36989559 36989599 41 ACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTAT ACTTGCTTCTAGATAAAAACCTGTCCTTCCTAGGTAAGTAT < 41bp 1 0.203907259143719 1 0.0444067716598511 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989579 chr15:36989572 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_28935 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989584 + 36989564 36989604 41 CTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTC CTTCTAGATAAAAACCTGTCCTTCCTAGGTAAGTATTATTC < 41bp 1 0.0947436666531818 1 0.0542307198047638 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989584 chr15:36989572 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_28936 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989587 + 36989567 36989607 41 CTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACA CTAGATAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACA < 41bp 1 0.0880892560089287 1 0.148515611886978 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989587 chr15:36989572 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_28937 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989572 36989572 1 + G T LUSC 36989588 + 36989568 36989608 41 TAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACAT TAGATAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACAT < 41bp 1 0.719896131895344 1 0.770488917827606 experiment 0.560207736209311 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989588 chr15:36989572 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_28938 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chrX 103432878 103432878 1 + G C LUSC 103432885 + 103432865 103432905 41 TCTGCAAGCAGCAGTGGGTCCAGTGTTGGAAACTCTGCTTC TCTGCAAGCAGCACTGGGTCCAGTGTTGGAAACTCTGCTTC < 41bp 1 0.786768744618834 1 0.433236420154572 experiment 0.426462510762332 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103432885 chrX:103432878 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_28939 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103432854-103432884
64251 chr7 150773221 150773221 1 + C T LUSC 150773215 + 150773195 150773235 41 CCCCTTCATCCTCATCCTCACAGTGCCGCTCCGCATGGTGG CCCCTTCATCCTCATCCTCACAGTGCTGCTCCGCATGGTGG < 41bp 1 0.251940837594305 1 0.0670624375343323 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773215 chr7:150773221 nonsynonymous SNV 0.955 4 27 hm5C_associated_SNPs_28940 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150773197-150773235
64251 chr7 150773221 150773221 1 + C T LUSC 150773220 + 150773200 150773240 41 TCATCCTCATCCTCACAGTGCCGCTCCGCATGGTGGTGCTC TCATCCTCATCCTCACAGTGCTGCTCCGCATGGTGGTGCTC < 41bp 1 0.135970254255406 1 0.0262405276298523 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773220 chr7:150773221 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_28941 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150773197-150773235
64251 chr8 145139181 145139181 1 + T G LUSC 145139185 + 145139165 145139205 41 CTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAAGG CTTGACCTGCTCAATCGCTTCCAGACCTTCTGCCAGAAAGG < 41bp 1 0.442642272321736 1 0.351506531238556 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139185 chr8:145139181 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_28942 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145139180-145139200
64251 chr3 127323819 127323819 1 + G A LUSC 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GAGCGGGCCACGGAGGACGGCGAGGAGGACAAGGAGATGAT < 41bp 1 0.694696951687572 1 0.528165340423584 experiment 0.610606096624855 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323819 nonsynonymous SNV 0.991 1 31 hm5C_associated_SNPs_28943 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:127323780-127323840
64251 chr1 29651779 29651779 1 + G T LUSC 29651781 + 29651761 29651801 41 CGCTGCCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAAC CGCTGCCACAACTTGGTGTACGTTTTCTTTGCTGCCAAAAC < 41bp 1 0.0499051570730959 1 0.0387937426567078 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPRU ENSG00000060656 CDS Human protein_coding chr1:29651781 chr1:29651779 nonsynonymous SNV 0.994 3 19 hm5C_associated_SNPs_28945 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29651757-29651782
64251 chr5 912047 912047 1 + T A LUSC 912029 + 912009 912049 41 CGTGGCCTTCGTGGACAGGGCTGACATCAAGCAGTACATTG CGTGGCCTTCGTGGACAGGGCTGACATCAAGCAGTACAATG < 41bp 1 0.344616911799751 1 0.0236456096172333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:912029 chr5:912047 nonsynonymous SNV 0.705 5 39 hm5C_associated_SNPs_28946 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:912021-912059
64251 chr4 166300542 166300542 1 + C A LUSC 166300526 + 166300506 166300546 41 CAAGAGGACGGCATCTCCTTCGAGTACCACCGCTACCCCGA CAAGAGGACGGCATCTCCTTCGAGTACCACCGCTACACCGA < 41bp 1 0.740604628230314 1 0.595040082931519 experiment 0.518790743539373 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CPE ENSG00000109472 CDS Human protein_coding chr4:166300526 chr4:166300542 nonsynonymous SNV 0.957 0 37 hm5C_associated_SNPs_28947 0 0 7 DDX3X POSTAR2 ENCODE chr4:166300539-166300576
64251 chr14 73550247 73550247 1 + G T LUSC 73550235 + 73550215 73550255 41 TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGAAAGCTT TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCTGAAAGCTT < 41bp 1 0.569866087858464 1 0.486958265304565 experiment 0.860267824283073 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73550235 chr14:73550247 stopgain 0.998 1 33 hm5C_associated_SNPs_28949 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:73550245-73550266
64251 chr16 72142741 72142741 1 + C T LUSC 72142736 + 72142716 72142756 41 GAACATCCGCACAGGGATGCCCTGCCACTTGCACCCCACCA GAACATCCGCACAGGGATGCCCTGCTACTTGCACCCCACCA < 41bp 1 0.135077105328714 1 0.0543544590473175 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142736 chr16:72142741 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_28950 0 0 1 DDX24 POSTAR2 ENCODE chr16:72142734-72142765
64251 chr14 73550249 73550249 1 + A T LUSC 73550235 + 73550215 73550255 41 TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGAAAGCTT TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGTAAGCTT < 41bp 1 0.606212164600775 1 0.43021622300148 experiment 0.78757567079845 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73550235 chr14:73550249 synonymous SNV . 0 35 hm5C_associated_SNPs_28951 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:73550245-73550266
64251 chr16 57171169 57171169 1 + A T LUSC 57171175 + 57171155 57171195 41 CCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG CCGGTTTGCGGCCCTGGCCACACAACAGCGGACGGCCACGG < 41bp 1 0.64210027452026 1 0.472647696733475 experiment 0.71579945095948 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171175 chr16:57171169 nonsynonymous SNV 0.992 1 15 hm5C_associated_SNPs_28952 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr5 179151695 179151695 1 + C A LUSC 179151689 + 179151669 179151709 41 TGGTATGGAGTATAAGAAAACTGATGCACCTCAACCGGATG TGGTATGGAGTATAAGAAAACTGATGAACCTCAACCGGATG < 41bp 1 0.51324699433837 1 0.177122175693512 experiment 0.973506011323261 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151689 chr5:179151695 nonsynonymous SNV 0.943 1 27 hm5C_associated_SNPs_28955 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151695 179151695 1 + C A LUSC 179151698 + 179151678 179151718 41 GTATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAG GTATAAGAAAACTGATGAACCTCAACCGGATGTGAAGGAAG < 41bp 1 0.638498940838659 1 0.742653846740723 experiment 0.723002118322682 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151698 chr5:179151695 nonsynonymous SNV 0.943 1 18 hm5C_associated_SNPs_28956 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151695 179151695 1 + C A LUSC 179151700 + 179151680 179151720 41 ATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAG ATAAGAAAACTGATGAACCTCAACCGGATGTGAAGGAAGAG < 41bp 1 0.269165911240542 1 0.184454143047333 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151700 chr5:179151695 nonsynonymous SNV 0.943 1 16 hm5C_associated_SNPs_28957 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151695 179151695 1 + C A LUSC 179151704 + 179151684 179151724 41 GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAG GAAAACTGATGAACCTCAACCGGATGTGAAGGAAGAGGAAG < 41bp 1 0.498521378686011 1 0.754861235618591 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151704 chr5:179151695 nonsynonymous SNV 0.943 1 12 hm5C_associated_SNPs_28958 0 0 55 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr8 48877253 48877253 1 + G A LUSC 48877243 + 48877223 48877263 41 ACCATTCAACGCATTGAAGACTAAGAATATGAGAAACCTGA ACCATTCAACGCATTGAAGACTAAGAATATAAGAAACCTGA < 41bp 1 0.20566680439798 1 0.385665625333786 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48877243 chr8:48877253 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_28962 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48877178-48877270
64251 chr12 110770413 110770413 1 + G A LUSC 110770433 + 110770413 110770453 41 GGACAGAGTGGAAGGTGATACTTGTTCCCTTAATGAGTTTA AGACAGAGTGGAAGGTGATACTTGTTCCCTTAATGAGTTTA < 41bp 1 0.170951172386682 1 0.0864560008049011 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110770433 chr12:110770413 synonymous SNV . 0 1 hm5C_associated_SNPs_28963 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:110770400-110770420
64251 chr1 154304496 154304496 1 + G A LUSC 154304485 + 154304465 154304505 41 TGGGCTGTGTTACATAGAGACAGCAGAACTTGATGGGTAAG TGGGCTGTGTTACATAGAGACAGCAGAACTTAATGGGTAAG < 41bp 1 0.634125904916723 1 0.478939235210419 experiment 0.731748190166553 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154304485 chr1:154304496 nonsynonymous SNV 0.886 5 32 hm5C_associated_SNPs_28964 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:154304470-154304508
64251 chr17 49239125 49239125 1 + A G LUSC 49239112 + 49239092 49239132 41 CATTATACATGGCAGTGATTCTGTGGAGAGTGCAGAGAAGG CATTATACATGGCAGTGATTCTGTGGAGAGTGCGGAGAAGG < 41bp 1 0.468906175979765 1 0.482679069042206 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239112 chr17:49239125 synonymous SNV . 0 34 hm5C_associated_SNPs_28965 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr17 49239125 49239125 1 + A G LUSC 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTGTGGAGAGTGCGGAGAAGGAGATCGGCTTGT < 41bp 1 0.510931557204393 1 0.698559880256653 experiment 0.978136885591215 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239125 synonymous SNV . 0 22 hm5C_associated_SNPs_28966 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr20 58519945 58519945 1 + A T LUSC 58519940 + 58519920 58519960 41 CTGTCCGGCAGTGGAAGCAGCTCTAAGGTGGAAACCAGCGG CTGTCCGGCAGTGGAAGCAGCTCTATGGTGGAAACCAGCGG < 41bp 1 0.695687502168917 1 0.765943288803101 experiment 0.608624995662167 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519940 chr20:58519945 nonsynonymous SNV 0.005 1 26 hm5C_associated_SNPs_28967 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:58519944-58519969
64251 chr11 74329607 74329607 1 + G T LUSC 74329602 + 74329582 74329622 41 ATTTAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTC ATTTAGTGCTATACAATGTGCAGCTTCCGTCCCTAGAGCTC < 41bp 1 0.35209869634053 1 0.25530081987381 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329602 chr11:74329607 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_28968 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329605 + 74329585 74329625 41 TAGTGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTG TAGTGCTATACAATGTGCAGCTTCCGTCCCTAGAGCTCCTG < 41bp 1 0.0567239558009373 1 0.0531302094459534 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329605 chr11:74329607 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_28969 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329608 + 74329588 74329628 41 TGCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTG TGCTATACAATGTGCAGCTTCCGTCCCTAGAGCTCCTGCTG < 41bp 1 0.0768296773729985 1 0.053628146648407 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329608 chr11:74329607 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_28970 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329609 + 74329589 74329629 41 GCTATACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTGA GCTATACAATGTGCAGCTTCCGTCCCTAGAGCTCCTGCTGA < 41bp 1 0.205277332762934 1 0.180572301149368 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329609 chr11:74329607 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_28971 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329614 + 74329594 74329634 41 ACAATGTGCAGCTGCCGTCCCTAGAGCTCCTGCTGAATCCT ACAATGTGCAGCTTCCGTCCCTAGAGCTCCTGCTGAATCCT < 41bp 1 0.756168006933315 1 0.338771849870682 experiment 0.48766398613337 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329614 chr11:74329607 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_28972 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329623 + 74329603 74329643 41 AGCTGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTT AGCTTCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTT < 41bp 1 0.539942557015967 1 0.0966184437274933 experiment 0.920114885968065 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329623 chr11:74329607 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_28973 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr11 74329607 74329607 1 + G T LUSC 74329626 + 74329606 74329646 41 TGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA TTCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA < 41bp 1 0.693501321978932 1 0.14814418554306 experiment 0.612997356042135 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329626 chr11:74329607 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_28974 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329596-74329626
64251 chr1 45479691 45479691 1 + C T LUSC 45479707 + 45479687 45479727 41 TCCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTG TCCTTACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTG < 41bp 1 0.254912095232814 1 0.0780476033687592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479707 chr1:45479691 synonymous SNV . 0 5 hm5C_associated_SNPs_28975 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:45479669-45479695
64251 chr1 45479691 45479691 1 + C T LUSC 45479708 + 45479688 45479728 41 CCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTGG CCTTACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTGG < 41bp 1 0.276777159636871 1 0.233365386724472 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479708 chr1:45479691 synonymous SNV . 0 4 hm5C_associated_SNPs_28976 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:45479669-45479695
64251 chr8 144644930 144644930 1 + G A LUSC 144644948 + 144644928 144644968 41 CCGGCCTGGGTCTTGCTGGACGAGTGTGGCCTAGAGCTGGG CCAGCCTGGGTCTTGCTGGACGAGTGTGGCCTAGAGCTGGG < 41bp 1 0.777556251300606 1 0.434881120920181 experiment 0.444887497398787 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control GSDMD ENSG00000104518 CDS Human protein_coding chr8:144644948 chr8:144644930 synonymous SNV . 0 3 hm5C_associated_SNPs_28978 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:144644925-144644945
64251 chr3 148714590 148714590 1 + G C LUSC 148714596 + 148714576 148714616 41 AGCACCAGACCCAGGGTGGCCTGACTGCTTCAATTCCGGAG AGCACCAGACCCAGCGTGGCCTGACTGCTTCAATTCCGGAG < 41bp 1 0.447920727385407 1 0.132977396249771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714596 chr3:148714590 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_28979 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:148714590-148714616
64251 chr12 109637324 109637324 1 + C T LUSC 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCATGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT < 41bp 1 0.243607432563505 1 0.697700560092926 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637324 synonymous SNV . 0 6 hm5C_associated_SNPs_28980 0 0 1 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr22 30416160 30416160 1 + A G LUSC 30416167 + 30416147 30416187 41 CCCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCTACAG CCCTTTTGAGACCGGAGGACCAAACGTGGACAGTTCTACAG < 41bp 1 0.172426657690187 1 0.334993660449982 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416167 chr22:30416160 nonsynonymous SNV 0.986 4 14 hm5C_associated_SNPs_28981 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:30416142-30416177
64251 chr11 61503245 61503245 1 + G T LUSC 61503225 + 61503205 61503245 41 CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTGAGCG CCCAAGGATGCCCTGACTGACCTGACGGGTGATGCTGAGCT < 41bp 1 0.223833801168189 1 0.0798683762550354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503225 chr11:61503245 nonsynonymous SNV 0.995 3 41 hm5C_associated_SNPs_28983 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61503245-61503277
64251 chr14 90867645 90867645 1 + G T LUSC 90867648 + 90867628 90867668 41 TGATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTG TGATAAAGATGGCGATGTCACCATCACAACAAAGGAACTTG < 41bp 1 0.107284985749013 1 0.119933992624283 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867648 chr14:90867645 nonsynonymous SNV 0.976 2 18 hm5C_associated_SNPs_28984 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr14 90867645 90867645 1 + G T LUSC 90867649 + 90867629 90867669 41 GATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTGG GATAAAGATGGCGATGTCACCATCACAACAAAGGAACTTGG < 41bp 1 0.583155291584144 1 0.421074271202087 experiment 0.833689416831712 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867649 chr14:90867645 nonsynonymous SNV 0.976 2 17 hm5C_associated_SNPs_28985 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr14 90867644 90867644 1 + G T LUSC 90867648 + 90867628 90867668 41 TGATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTG TGATAAAGATGGCGATTGCACCATCACAACAAAGGAACTTG < 41bp 1 0.0937268620994132 1 0.0808326900005341 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867648 chr14:90867644 nonsynonymous SNV 0.936 2 17 hm5C_associated_SNPs_28986 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr14 90867644 90867644 1 + G T LUSC 90867649 + 90867629 90867669 41 GATAAAGATGGCGATGGCACCATCACAACAAAGGAACTTGG GATAAAGATGGCGATTGCACCATCACAACAAAGGAACTTGG < 41bp 1 0.479467543411027 1 0.374849945306778 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90867649 chr14:90867644 nonsynonymous SNV 0.936 2 16 hm5C_associated_SNPs_28987 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:90867600-90867680
64251 chr13 48828053 48828053 1 + A G LUSC 48828044 + 48828024 48828064 41 AGGTGTTATTCTAGGAGGAGCATACTTGTACAAATATTTTG AGGTGTTATTCTAGGAGGAGCATACTTGTGCAAATATTTTG < 41bp 1 0.0852270121878124 1 0.199811935424805 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITM2B ENSG00000136156 CDS Human protein_coding chr13:48828044 chr13:48828053 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_28988 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48828018-48828055
64251 chr13 48937009 48937009 1 + G T LUSC 48936995 + 48936975 48937015 41 GTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCA GTTCACCTCGAACACCCAGGCGAGGTCAGAACAGTAGTGCA < 41bp 1 0.642194282362834 1 0.864266395568848 experiment 0.715611435274331 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48936995 chr13:48937009 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_28990 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48936989-48937032
64251 chr10 17278315 17278315 1 + T A LUSC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCCCACTGGTTGATACCCACTCAAAA < 41bp 1 0.241965278615857 1 0.316703677177429 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278315 synonymous SNV . 0 20 hm5C_associated_SNPs_28991 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr6 7581122 7581122 1 + C T LUSC 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGTAGCTGCAG < 41bp 1 0.77873981321678 1 0.632900953292847 experiment 0.442520373566439 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581122 stopgain 0.983 1 33 hm5C_associated_SNPs_28992 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581122 7581122 1 + C T LUSC 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TCCAGAACTCTCTGAAAGAGCTGTAGCTGCAGAAGCAGAAG < 41bp 1 0.515896661808926 1 0.284309685230255 experiment 0.968206676382149 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581122 stopgain 0.983 1 24 hm5C_associated_SNPs_28993 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581122 7581122 1 + C T LUSC 7581125 + 7581105 7581145 41 ACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAGGTGGAA ACTCTCTGAAAGAGCTGTAGCTGCAGAAGCAGAAGGTGGAA < 41bp 1 0.784626187005514 1 0.587613224983215 experiment 0.430747625988972 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581125 chr6:7581122 stopgain 0.983 1 18 hm5C_associated_SNPs_28994 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr1 10165591 10165591 1 + G T LUSC 10165581 + 10165561 10165601 41 GCCTTTCCAACAGTATTCTCCGATTTTAAGGACTTGATTGG GCCTTTCCAACAGTATTCTCCGATTTTAAGTACTTGATTGG < 41bp 1 0.069887997566147 1 0.108505755662918 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBE4B ENSG00000130939 CDS Human protein_coding chr1:10165581 chr1:10165591 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_28995 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:10165576-10165594
64251 chr3 184021754 184021754 1 + G A LUSC 184021744 + 184021724 184021764 41 GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTGTGGCATAGTG GCTCTTTGTAGTCAGGAGCTCTTCTTGCCTATGGCATAGTG < 41bp 1 0.174781262579698 1 0.110863745212555 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021744 chr3:184021754 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_28996 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184021720-184021789
64251 chr3 49049433 49049433 1 + G T LUSC 49049444 + 49049424 49049464 41 CCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT CCCTGCACATACAGGTGCACCCTCTCTTCAGCCTGCCTGAT < 41bp 1 0.0470728689034945 1 0.0312307775020599 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049444 chr3:49049433 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_28999 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:49049420-49049440
64251 chr19 30499996 30499996 1 + G A LUSC 30500003 + 30499983 30500023 41 CAAATGTGAATGCGATGCATCAAGTAACAGACTCTCATACT CAAATGTGAATGCAATGCATCAAGTAACAGACTCTCATACT < 41bp 1 0.47658474357764 1 0.165496915578842 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30500003 chr19:30499996 synonymous SNV . 0 14 hm5C_associated_SNPs_29001 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30499884-30500263
64251 chr7 128486411 128486411 1 + C T LUSC 128486405 + 128486385 128486425 41 AGGTCGCTGTGCCCAAGAGCCCCTTCCGAGTGGGCGTGACC AGGTCGCTGTGCCCAAGAGCCCCTTCTGAGTGGGCGTGACC < 41bp 1 0.0315954353627884 1 0.0269523561000824 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128486405 chr7:128486411 stopgain 0.992 1 27 hm5C_associated_SNPs_29002 0 0 5 FMR1 POSTAR2 ENCODE chr7:128486383-128486481
64251 chr17 35872383 35872383 1 + C T LUSC 35872403 + 35872383 35872423 41 CAGAGGTCACAGCACGCTACCAAGGACTCTCATGGCCCCTC TAGAGGTCACAGCACGCTACCAAGGACTCTCATGGCCCCTC < 41bp 1 0.78792170427223 1 0.692306578159332 experiment 0.424156591455541 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUSP14 ENSG00000161326 CDS Human other chr17:35872403 chr17:35872383 synonymous SNV . 0 1 hm5C_associated_SNPs_29004 0 0 2 DICER1 POSTAR2 GSE55333,GSM1334288 chr17:35872370-35872390
64251 chr8 145139401 145139401 1 + G T LUSC 145139396 + 145139376 145139416 41 CTCATGGTTCTGCGGCAGGCCTCCGGCCGCCCCCACGGCTC CTCATGGTTCTGCGGCAGGCCTCCGTCCGCCCCCACGGCTC < 41bp 1 0.746696877821738 1 0.755422830581665 experiment 0.506606244356524 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139396 chr8:145139401 nonsynonymous SNV 0.736 4 26 hm5C_associated_SNPs_29005 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr8 145139401 145139401 1 + G T LUSC 145139416 + 145139396 145139436 41 CTCCGGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCT CTCCGTCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCT < 41bp 1 0.332737688508362 1 0.0210722386837006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139416 chr8:145139401 nonsynonymous SNV 0.736 4 6 hm5C_associated_SNPs_29006 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr8 145139401 145139401 1 + G T LUSC 145139418 + 145139398 145139438 41 CCGGCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCTAC CCGTCCGCCCCCACGGCTCCCATGGCCTCTTCCTGCGCTAC < 41bp 1 0.545809009819456 1 0.0328400135040283 experiment 0.908381980361088 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139418 chr8:145139401 nonsynonymous SNV 0.736 4 4 hm5C_associated_SNPs_29007 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145139315-145139421
64251 chr14 105177440 105177440 1 + G T LUSC 105177427 + 105177407 105177447 41 CCCTCCCAGGGCAGCCACACCGGTGACGCCGACGGCTTCAA CCCTCCCAGGGCAGCCACACCGGTGACGCCGACTGCTTCAA < 41bp 1 0.468434376489265 1 0.674362897872925 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105177427 chr14:105177440 nonsynonymous SNV 0.537 4 34 hm5C_associated_SNPs_29009 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105177424-105177446
64251 chr1 46497091 46497091 1 + A T LUSC 46497074 + 46497054 46497094 41 GGCCTACAGCTATGGAGACCCGAGGCCGTGGGACCTCACAG GGCCTACAGCTATGGAGACCCGAGGCCGTGGGACCTCTCAG < 41bp 1 0.67419662146809 1 0.847663044929504 experiment 0.65160675706382 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MAST2 ENSG00000086015 CDS Human protein_coding chr1:46497074 chr1:46497091 synonymous SNV . 0 38 hm5C_associated_SNPs_29010 0 0 8 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:46497078-46497104
64251 chr5 68425360 68425360 1 + A T LUSC 68425373 + 68425353 68425393 41 CTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACA CTGGCCTTAGTACTGGATTTCATGATGTTCTGGCTATGACA < 41bp 1 0.55664351459657 1 0.346598744392395 experiment 0.88671297080686 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68425373 chr5:68425360 synonymous SNV . 0 8 hm5C_associated_SNPs_29011 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:68425334-68425362
64251 chr18 9182474 9182474 1 + C G LUSC 9182456 + 9182436 9182476 41 CAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTG CAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTGTG < 41bp 1 0.0780043190960045 1 0.0649958252906799 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9182456 chr18:9182474 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_29013 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:9182451-9182484
64251 chr7 99956625 99956625 1 + G T LUSC 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCTAGTCGAGCTGGACACCCGG < 41bp 1 0.515691900312618 1 0.205982029438019 experiment 0.968616199374764 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956625 nonsynonymous SNV 0.164 3 22 hm5C_associated_SNPs_29014 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr7 99956625 99956625 1 + G T LUSC 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTATTTCTGCCTAGTCGAGCTGGACACCCGGAGATCAGGG < 41bp 1 0.716464635099183 1 0.698503494262695 experiment 0.567070729801633 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956625 nonsynonymous SNV 0.164 3 13 hm5C_associated_SNPs_29015 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr7 99956625 99956625 1 + G T LUSC 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCTAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA < 41bp 1 0.27598415990861 1 0.0340757668018341 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956625 nonsynonymous SNV 0.164 3 8 hm5C_associated_SNPs_29016 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr10 103919289 103919289 1 + G C LUSC 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGACGAGCAAGAGGAGCAAAAAAAACCCATGAAAAAT < 41bp 1 0.504117138642786 1 0.49727389216423 experiment 0.991765722714428 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919289 nonsynonymous SNV 0.977 3 12 hm5C_associated_SNPs_29017 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919229-103919298
64251 chr2 28002352 28002352 1 + G T LUSC 28002338 + 28002318 28002358 41 TCGTGGAAAAGAAAAAAATACGCTCCCTTTAAACGGTGGAT TCGTGGAAAAGAAAAAAATACGCTCCCTTTAAACTGTGGAT < 41bp 1 0.215967802278179 1 0.223286330699921 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL33 ENSG00000243147 CDS Human protein_coding chr2:28002338 chr2:28002352 nonsynonymous SNV 0.698 1 35 hm5C_associated_SNPs_29018 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:28002303-28002378
64251 chr5 102472515 102472515 1 + C G LUSC 102472507 + 102472487 102472527 41 TAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGG TAATCAATGACTTGAATATGCAGTATCTGATACAAGATAGG < 41bp 1 0.388813848474402 1 0.190113127231598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102472507 chr5:102472515 synonymous SNV . 0 29 hm5C_associated_SNPs_29019 0 0 1 ZNF622 POSTAR2 ENCODE chr5:102472471-102472526
64251 chr10 17277852 17277852 1 + C T LUSC 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGGATTTCTTTGCCTCTTCCAAACTTTTCCTCCCTG < 41bp 1 0.0664302417800743 1 0.443943440914154 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277852 synonymous SNV . 0 15 hm5C_associated_SNPs_29020 0 0 38 FUS POSTAR2 DRA001158,DRS012384 chr10:17277820-17277863
64251 chr12 53428431 53428431 1 + G T LUSC 53428436 + 53428416 53428456 41 AAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAG AAGAAACTCAGGAACTGGAACGGTCGAGGACAGGAAGTGAG < 41bp 1 0.235293085657831 1 0.526359677314758 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53428436 chr12:53428431 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_29022 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:53428420-53428440
64251 chrX 73045978 73045978 1 - G C LUSC 73045992 - 73045972 73046012 41 TACACAGATGTGCCAGACTTCTGAGAAGCACCTGCCAGCAA TACACAGATGTGCCAGACTTCTGAGAAGCACCTGGCAGCAA < 41bp 1 0.532287030623885 1 0.661497056484222 experiment 0.935425938752229 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045992 chrX:73045978 . . 0 35 hm5C_associated_SNPs_29023 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045978 73045978 1 - G C LUSC 73045995 - 73045975 73046015 41 AAATACACAGATGTGCCAGACTTCTGAGAAGCACCTGCCAG AAATACACAGATGTGCCAGACTTCTGAGAAGCACCTGGCAG < 41bp 1 0.138119273995158 1 0.0561209917068481 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045995 chrX:73045978 . . 0 38 hm5C_associated_SNPs_29024 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr20 55088446 55088446 1 + A G LUSC 55088433 + 55088413 55088453 41 GGCACCAAGGAGGATGTGGACGTGCTGAAGACAAGGATGGA GGCACCAAGGAGGATGTGGACGTGCTGAAGACAGGGATGGA < 41bp 1 0.465451240020176 1 0.0875260829925537 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55088433 chr20:55088446 nonsynonymous SNV 0.959 3 34 hm5C_associated_SNPs_29025 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr20:55088407-55088462
64251 chr4 144336807 144336807 1 + A G LUSC 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTGAAAACAGCTACGTTTTTGATATCAACAC < 41bp 1 0.432303414939207 1 0.106014400720596 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336807 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_29026 0 0 1 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chr2 32773032 32773032 1 + C T LUSC 32773028 + 32773008 32773048 41 CTTCTGGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGG CTTCTGGGTGGGATGTGGAACAAGTCTTAACTAAGCAAAGG < 41bp 1 0.197787474064207 1 0.436412006616592 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773028 chr2:32773032 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_29027 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32773016-32773032
64251 chr2 32773032 32773032 1 + C T LUSC 32773033 + 32773013 32773053 41 GGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGGCTGGA GGGTGGGATGTGGAACAAGTCTTAACTAAGCAAAGGCTGGA < 41bp 1 0.266631013187191 1 0.0667303502559662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773033 chr2:32773032 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_29028 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32773016-32773032
64251 chr2 32773032 32773032 1 + C T LUSC 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TGGAACAAGTCTTAACTAAGCAAAGGCTGGAAGAGGAACAT < 41bp 1 0.176917060463513 1 0.546582698822021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773032 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_29029 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32773016-32773032
64251 chr14 105355929 105355929 1 + A C LUSC 105355938 + 105355918 105355958 41 ACGGCTCCCCCAAACACACACGCTCCCACACCTCAACAGCC ACGGCTCCCCCCAACACACACGCTCCCACACCTCAACAGCC < 41bp 1 0.0407330617466387 1 0.124820947647095 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105355938 chr14:105355929 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_29030 0 0 1 FBL POSTAR2 GSE43666,GSM1067864 chr14:105355921-105355942
64251 chr6 27833317 27833317 1 + A T LUSC 27833336 + 27833316 27833356 41 GAGATCCTGGAGCTGGCGGGCAACGCCGCCCGCGACAACAA GTGATCCTGGAGCTGGCGGGCAACGCCGCCCGCGACAACAA < 41bp 1 0.664828382300794 1 0.461272597312927 experiment 0.670343235398412 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833336 chr6:27833317 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_29031 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27833282-27833320
64251 chr22 23438367 23438367 1 + G T LUSC 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGCTCATCGCCGCAGCTGACTAT < 41bp 1 0.17404457794051 1 0.02409827709198 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438367 nonsynonymous SNV 0.970 1 22 hm5C_associated_SNPs_29032 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr16 31090482 31090482 1 + G T LUSC 31090463 + 31090443 31090483 41 TGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTGCAGCGG TGCAGCTCTCGGAAGCAGAGCTGCTGAATCAGCTGCAGCTG < 41bp 1 0.403379111434163 1 0.0531512498855591 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31090463 chr16:31090482 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_29033 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:31090478-31090512
64251 chr12 6618926 6618926 1 + G T LUSC 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTTCAGCACTT < 41bp 1 0.146720960332546 1 0.066021054983139 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618926 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_29034 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6618923-6618949
64251 chrX 70787360 70787360 1 + G A LUSC 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATTCTGAAGCATGTTCCCAATAGTGTACTC < 41bp 1 0.191996423051861 1 0.0648396015167236 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787360 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_29035 0 0 25 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr5 159849867 159849867 1 + C G LUSC 159849863 + 159849843 159849883 41 GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAA GTCTGTAAAGACCAAGGGACCCCTGAAACAAAAACAGCCAA < 41bp 1 0.345237997884641 1 0.192426204681396 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159849863 chr5:159849867 synonymous SNV . 0 25 hm5C_associated_SNPs_29036 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:159849847-159849875
64251 chr19 19308355 19308355 1 + C T LUSC 19308370 + 19308350 19308390 41 CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC CCAGATGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC < 41bp 1 0.376575266356144 1 0.0997674763202667 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308370 chr19:19308355 synonymous SNV . 0 6 hm5C_associated_SNPs_29038 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr19 19308355 19308355 1 + C T LUSC 19308371 + 19308351 19308391 41 CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC CAGATGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC < 41bp 1 0.293116060165924 1 0.0509238541126251 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308371 chr19:19308355 synonymous SNV . 0 5 hm5C_associated_SNPs_29039 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr16 70589051 70589051 1 + A T LUSC 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC TGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC < 41bp 1 0.297885841759736 1 0.111404359340668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589051 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_29041 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr1 2160680 2160680 1 + G C LUSC 2160685 + 2160665 2160705 41 ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATCCT ACGGCCGACCAGCTGCAGATCCTCAAAGTCATGGGCATCCT < 41bp 1 0.203098415639623 1 0.0185945630073547 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2160685 chr1:2160680 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_29042 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2160644-2160687
64251 chr1 223943220 223943220 1 + G C LUSC 223943200 + 223943180 223943220 41 AGACACATTCTGGATGAACCCTCAGTACCTGATCAAGCTGG AGACACATTCTGGATGAACCCTCAGTACCTGATCAAGCTGC < 41bp 1 0.67460467332624 1 0.484456688165665 experiment 0.65079065334752 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943200 chr1:223943220 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_29043 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chr1 223943220 223943220 1 + G C LUSC 223943207 + 223943187 223943227 41 TTCTGGATGAACCCTCAGTACCTGATCAAGCTGGAGGAGGA TTCTGGATGAACCCTCAGTACCTGATCAAGCTGCAGGAGGA < 41bp 1 0.430796922531069 1 0.0580410361289978 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943207 chr1:223943220 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_29044 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chr19 19627035 19627035 1 + G T LUSC 19627040 + 19627020 19627060 41 GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA GGGACCGGAAGTGTGTGATACTGCGAGTATGGCGGCGTCAA < 41bp 1 0.634205627571122 1 0.384364187717438 experiment 0.731588744857755 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19627040 chr19:19627035 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_29045 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr6 27806734 27806734 1 + G T LUSC 27806746 + 27806726 27806766 41 AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG AGACGGCCTTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG < 41bp 1 0.591934556786545 1 0.105237513780594 experiment 0.81613088642691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806746 chr6:27806734 nonsynonymous SNV 0.992 0 9 hm5C_associated_SNPs_29062 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806700-27806760
64251 chr14 94568211 94568211 1 + C A LUSC 94568191 + 94568171 94568211 41 GGGACTGTGCTCGTGGCGCTCAGTGCCATGGGCTTCACCTC GGGACTGTGCTCGTGGCGCTCAGTGCCATGGGCTTCACCTA < 41bp 1 0.735141564248428 1 0.75248771905899 experiment 0.529716871503144 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568191 chr14:94568211 stopgain 0.000 0 41 hm5C_associated_SNPs_29065 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr7 44801184 44801184 1 + G A LUSC 44801172 + 44801152 44801192 41 TTCCAGCTGCGAGACTCAGTCTACAAGACCCTGATAATGAG TTCCAGCTGCGAGACTCAGTCTACAAGACCCTAATAATGAG < 41bp 1 0.609526575823136 1 0.88629949092865 experiment 0.780946848353727 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801172 chr7:44801184 synonymous SNV . 0 33 hm5C_associated_SNPs_29068 0 0 5 BUD13 POSTAR2 ENCODE chr7:44801161-44801192
64251 chr20 55968354 55968354 1 + G T LUSC 55968352 + 55968332 55968372 41 TAGGCTTTGCCATTGGGGTGCAGCAGCTGCACCCCACCTTG TAGGCTTTGCCATTGGGGTGCATCAGCTGCACCCCACCTTG < 41bp 1 0.168309445823761 1 0.0490858256816864 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968352 chr20:55968354 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_29069 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr20 55968354 55968354 1 + G T LUSC 55968361 + 55968341 55968381 41 CCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGG CCATTGGGGTGCATCAGCTGCACCCCACCTTGATCCAGCGG < 41bp 1 0.0845508698693556 1 0.106679499149323 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968361 chr20:55968354 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_29070 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr20 55968354 55968354 1 + G T LUSC 55968363 + 55968343 55968383 41 ATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGAC ATTGGGGTGCATCAGCTGCACCCCACCTTGATCCAGCGGAC < 41bp 1 0.290774144234464 1 0.155918061733246 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968363 chr20:55968354 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_29071 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr20 55968354 55968354 1 + G T LUSC 55968364 + 55968344 55968384 41 TTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACT TTGGGGTGCATCAGCTGCACCCCACCTTGATCCAGCGGACT < 41bp 1 0.0180778131531267 1 0.103959500789642 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968364 chr20:55968354 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_29072 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr20 55968354 55968354 1 + G T LUSC 55968365 + 55968345 55968385 41 TGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTT TGGGGTGCATCAGCTGCACCCCACCTTGATCCAGCGGACTT < 41bp 1 0.0675403300613662 1 0.0890116989612579 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968365 chr20:55968354 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_29073 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr20 55968354 55968354 1 + G T LUSC 55968366 + 55968346 55968386 41 GGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTTA GGGGTGCATCAGCTGCACCCCACCTTGATCCAGCGGACTTA < 41bp 1 0.198570301636669 1 0.241634219884872 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968366 chr20:55968354 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_29074 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:55968340-55968360
64251 chr4 123814177 123814177 1 - C T LUSC 123814174 - 123814154 123814194 41 AGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACA AGTGGATGGATCTCAATAACCTGGCGAAGACTGAAAATACA < 41bp 1 0.752301324335062 1 0.463418364524841 experiment 0.495397351329876 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814174 chr4:123814177 nonsynonymous SNV 0.209 0 18 hm5C_associated_SNPs_29075 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:123814156-123814184
64251 chr12 66724969 66724969 1 + G A LUSC 66724950 + 66724930 66724970 41 CCAGGGGTCCGAGGAGCAAACAGTTGTCTATGTGGTGGGGA CCAGGGGTCCGAGGAGCAAACAGTTGTCTATGTGGTGGGAA < 41bp 1 0.630610847000248 1 0.411431878805161 experiment 0.738778305999503 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HELB ENSG00000127311 CDS Human protein_coding chr12:66724950 chr12:66724969 synonymous SNV . 0 40 hm5C_associated_SNPs_29076 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:66724950-66724980
64251 chr13 98654843 98654843 1 + C A LUSC 98654834 + 98654814 98654854 41 TAAATTTTGTTTTACTTTTTCTCCAGGATCCTGTAAGTACC TAAATTTTGTTTTACTTTTTCTCCAGGATACTGTAAGTACC < 41bp 1 0.566392658013136 1 0.903576374053955 experiment 0.867214683973728 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO5 ENSG00000065150 CDS Human protein_coding chr13:98654834 chr13:98654843 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_29078 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:98654812-98654857
64251 chr6 42975977 42975977 1 + A C LUSC 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGCG < 41bp 1 0.273251533470493 1 0.0647311508655548 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975977 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_29079 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42975963-42975990
64251 chr6 42975977 42975977 1 + A C LUSC 42975996 + 42975976 42976016 41 GAGCTCCTGGAGATCCTGGGCAGGTGAGAGGCCGGGTGGGG GCGCTCCTGGAGATCCTGGGCAGGTGAGAGGCCGGGTGGGG < 41bp 1 0.700134042516351 1 0.561451315879822 experiment 0.599731914967298 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975996 chr6:42975977 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_29080 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42975963-42975990
64251 chr9 133507341 133507341 1 + A G LUSC 133507332 + 133507312 133507352 41 CTTTTACCTTTTCCCAGTACCTTTCCTCCAAGGAGCTCCGG CTTTTACCTTTTCCCAGTACCTTTCCTCCGAGGAGCTCCGG < 41bp 1 0.0571710700968052 1 0.0363085269927979 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133507332 chr9:133507341 synonymous SNV . 0 30 hm5C_associated_SNPs_29081 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:133507329-133507371
64251 chr2 242757847 242757847 1 + G T LUSC 242757827 + 242757807 242757847 41 GTCAGTGGGCCCCGGGAGTCCCCTCCAGCCTCCACTCCTCG GTCAGTGGGCCCCGGGAGTCCCCTCCAGCCTCCACTCCTCT < 41bp 1 0.090982791970818 1 0.0513059496879578 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NEU4 ENSG00000204099 CDS Human protein_coding chr2:242757827 chr2:242757847 nonsynonymous SNV 0.001 0 41 hm5C_associated_SNPs_29083 0 0 2 DDX55 POSTAR2 ENCODE chr2:242757811-242757856
64251 chr9 7174680 7174680 1 + G A LUSC 7174666 + 7174646 7174686 41 TTTAAGAATGAATATGTGGCCGACCCTGTATACCGCACTTT TTTAAGAATGAATATGTGGCCGACCCTGTATACCACACTTT < 41bp 1 0.114114077993237 1 0.0356811881065369 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4C ENSG00000107077 CDS Human protein_coding chr9:7174666 chr9:7174680 nonsynonymous SNV 0.993 2 35 hm5C_associated_SNPs_29084 0 0 1 GRWD1 POSTAR2 ENCODE chr9:7174677-7174727
64251 chr19 19638848 19638848 1 + G T LUSC 19638852 + 19638832 19638872 41 TCCACACAACCCGCTGGGTGCCCCCCTTGATCGGGGAGCTG TCCACACAACCCGCTGTGTGCCCCCCTTGATCGGGGAGCTG < 41bp 1 0.17859876738086 1 0.0209019184112549 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638852 chr19:19638848 nonsynonymous SNV 0.437 4 17 hm5C_associated_SNPs_29086 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr13 26956969 26956969 1 + G T LUSC 26956984 + 26956964 26957004 41 TTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA TTTTATTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA < 41bp 1 0.207800949186099 1 0.143760293722153 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26956984 chr13:26956969 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_29088 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr13:26956960-26956994
64251 chr2 74074729 74074729 1 + G T LUSC 74074746 + 74074726 74074766 41 AGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCA AGTTCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCA < 41bp 1 0.113839835929505 1 0.106544435024261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074746 chr2:74074729 synonymous SNV . 0 4 hm5C_associated_SNPs_29089 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:74074711-74074733
64251 chr2 74074729 74074729 1 + G T LUSC 74074747 + 74074727 74074767 41 GTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCAC GTTCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCAC < 41bp 1 0.745192087693587 1 0.692574977874756 experiment 0.509615824612826 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074747 chr2:74074729 synonymous SNV . 0 3 hm5C_associated_SNPs_29090 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:74074711-74074733
64251 chr12 94562982 94562982 1 + C A LUSC 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATACATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT < 41bp 1 0.0548479835003925 1 0.0634486079216003 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94562982 synonymous SNV . 0 3 hm5C_associated_SNPs_29093 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:94562970-94562992
64251 chr10 7860717 7860717 1 + G T LUSC 7860727 + 7860707 7860747 41 TCTCGGTGGCGCAGATCTGCCAGGCGCTGGGCTGGGACTCG TCTCGGTGGCTCAGATCTGCCAGGCGCTGGGCTGGGACTCG < 41bp 1 0.79997063311924 1 0.810773611068726 experiment 0.400058733761521 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAF3 ENSG00000165632 CDS Human protein_coding chr10:7860727 chr10:7860717 synonymous SNV . 0 11 hm5C_associated_SNPs_29095 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:7860685-7860718
64251 chr5 10254914 10254914 1 + G T LUSC 10254899 + 10254879 10254919 41 TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGAT TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGTATGAT < 41bp 1 0.123354394256932 1 0.0844016373157501 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254899 chr5:10254914 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_29096 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254914 10254914 1 + G T LUSC 10254903 + 10254883 10254923 41 CAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA CAAGCTGATGGTGGAACTGTCCAAGTCTCAGTATGATGAAA < 41bp 1 0.260800059268405 1 0.222872763872147 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254903 chr5:10254914 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_29097 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254914 10254914 1 + G T LUSC 10254909 + 10254889 10254929 41 GATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAG GATGGTGGAACTGTCCAAGTCTCAGTATGATGAAATTGGAG < 41bp 1 0.561144492012396 1 0.599666595458984 experiment 0.877711015975208 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254909 chr5:10254914 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_29098 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr19 11114047 11114047 1 + G T LUSC 11114029 + 11114009 11114049 41 TTTCTAGGTATGAAGTAGCTCCGAGGTCTGATAGTGAAGAA TTTCTAGGTATGAAGTAGCTCCGAGGTCTGATAGTGAATAA < 41bp 1 0.248932973608959 1 0.355674058198929 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114029 chr19:11114047 stopgain 1.000 1 39 hm5C_associated_SNPs_29099 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr19 11114047 11114047 1 + G T LUSC 11114036 + 11114016 11114056 41 GTATGAAGTAGCTCCGAGGTCTGATAGTGAAGAAAGTGGCT GTATGAAGTAGCTCCGAGGTCTGATAGTGAATAAAGTGGCT < 41bp 1 0.151715001471347 1 0.121902942657471 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114036 chr19:11114047 stopgain 1.000 1 32 hm5C_associated_SNPs_29100 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr19 11114047 11114047 1 + G T LUSC 11114055 + 11114035 11114075 41 TCTGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGT TCTGATAGTGAATAAAGTGGCTCAGAAGAAGAGGAAGAGGT < 41bp 1 0.190448892434584 1 0.15461802482605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114055 chr19:11114047 stopgain 1.000 1 13 hm5C_associated_SNPs_29101 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr19 11114047 11114047 1 + G T LUSC 11114057 + 11114037 11114077 41 TGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGTAA TGATAGTGAATAAAGTGGCTCAGAAGAAGAGGAAGAGGTAA < 41bp 1 0.318417705570247 1 0.399770021438599 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114057 chr19:11114047 stopgain 1.000 1 11 hm5C_associated_SNPs_29102 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:11114019-11114055
64251 chr7 114302136 114302136 1 + A G LUSC 114302124 + 114302104 114302144 41 CTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCTTAGCC CTTCTGTCTGCTTTAGAATGCAGTACGTCATAGTCTTAGCC < 41bp 1 0.228226197449444 1 0.30824401974678 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXP2 ENSG00000128573 CDS Human protein_coding chr7:114302124 chr7:114302136 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_29103 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:114302130-114302142
64251 chr16 57243027 57243027 1 + T G LUSC 57243043 + 57243023 57243063 41 GAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATA GAGTGATTCCACTGGAAGATCCACTGGGACCAGCTGTTATA < 41bp 1 0.181129401721725 1 0.0663314461708069 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57243043 chr16:57243027 synonymous SNV . 0 5 hm5C_associated_SNPs_29104 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:57243027-57243028
64251 chr11 66282108 66282108 1 + C G LUSC 66282089 + 66282069 66282109 41 CTCAGACCCTACTTCAAGTTCAGCCTGCCCCAATTGCCTCC CTCAGACCCTACTTCAAGTTCAGCCTGCCCCAATTGCCTGC < 41bp 1 0.387433504593539 1 0.0917984545230865 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66282089 chr11:66282108 nonsynonymous SNV 0.932 1 40 hm5C_associated_SNPs_29105 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:66282100-66282138
64251 chr4 57881725 57881725 1 + C T LUSC 57881714 + 57881694 57881734 41 GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTA GAGGGAGATTCGGATCTATACGGATGCAGGCTGTATTTGTA < 41bp 1 0.631756023172699 1 0.732862532138824 experiment 0.736487953654603 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57881714 chr4:57881725 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_29106 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57881674-57881738
64251 chr16 66918558 66918558 1 + G C LUSC 66918554 + 66918534 66918574 41 CCAATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC CCAATTCCCCAGTGGAGGACCGGCCAGGTGTAGCCTCCTGC < 41bp 1 0.425781784505713 1 0.0851967632770538 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918554 chr16:66918558 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_29107 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:66918540-66918560
64251 chr22 24573530 24573530 1 + G A LUSC 24573545 + 24573525 24573565 41 AGTGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAG AGTGAAACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAG < 41bp 1 0.0909018271077343 1 0.352539956569672 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573545 chr22:24573530 synonymous SNV . 0 6 hm5C_associated_SNPs_29108 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573530 24573530 1 + G A LUSC 24573547 + 24573527 24573567 41 TGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCT TGAAACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCT < 41bp 1 0.126611242657077 1 0.345319598913193 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573547 chr22:24573530 synonymous SNV . 0 4 hm5C_associated_SNPs_29109 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573530 24573530 1 + G A LUSC 24573549 + 24573529 24573569 41 AGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCC AAACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCC < 41bp 1 0.14104660375314 1 0.505959451198578 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573549 chr22:24573530 synonymous SNV . 0 2 hm5C_associated_SNPs_29110 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573530 24573530 1 + G A LUSC 24573550 + 24573530 24573570 41 GACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCA AACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCA < 41bp 1 0.190470473175298 1 0.403825342655182 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573550 chr22:24573530 synonymous SNV . 0 1 hm5C_associated_SNPs_29111 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr1 24018318 24018318 1 + C T LUSC 24018298 + 24018278 24018318 41 GGCCGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGC GGCCGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGT < 41bp 1 0.3944531079849 1 0.444456368684769 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24018298 chr1:24018318 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_29112 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24018318 24018318 1 + C T LUSC 24018301 + 24018281 24018321 41 CGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGT CGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGTGGT < 41bp 1 0.267185095842828 1 0.113029718399048 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24018301 chr1:24018318 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_29113 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24018318 24018318 1 + C T LUSC 24018302 + 24018282 24018322 41 GGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGTG GGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGTGGTG < 41bp 1 0.425912165497793 1 0.0778849422931671 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24018302 chr1:24018318 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_29114 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr14 60592500 60592500 1 + G A LUSC 60592489 + 60592469 60592509 41 TGATGAAAAGTGGAAGGAAGCAATTTTACAAGAAAAGCCAT TGATGAAAAGTGGAAGGAAGCAATTTTACAAAAAAAGCCAT < 41bp 1 0.274576597703254 1 0.253730893135071 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60592489 chr14:60592500 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_29115 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr14:60592471-60592501
64251 chr17 48433473 48433473 1 + A T LUSC 48433472 + 48433452 48433492 41 TTCCACACGGTGCTGGAGAACAGCCTGGCCTGTGAGACCCT TTCCACACGGTGCTGGAGAACTGCCTGGCCTGTGAGACCCT < 41bp 1 0.40297027067919 1 0.20985621213913 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433472 chr17:48433473 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_29116 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48433460-48433488
64251 chr20 39978501 39978501 1 + C T LUSC 39978516 + 39978496 39978536 41 GAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGT GAGTCTCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGT < 41bp 1 0.657644362104118 1 0.568420827388763 experiment 0.684711275791764 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39978516 chr20:39978501 synonymous SNV . 0 6 hm5C_associated_SNPs_29118 0 0 1 DDX24 POSTAR2 ENCODE chr20:39978456-39978533
64251 chr9 138378978 138378978 1 + A C LUSC 138378966 + 138378946 138378986 41 ACCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCT ACCGCTCTTGGGACAGGGGGCCCAGCCAGGCCCGAGGTGCT < 41bp 1 0.0930575997661185 1 0.0980076193809509 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378966 chr9:138378978 synonymous SNV . 0 33 hm5C_associated_SNPs_29119 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378978 138378978 1 + A C LUSC 138378967 + 138378947 138378987 41 CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCCGAGGTGCTG < 41bp 1 0.103625801220283 1 0.124520033597946 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378967 chr9:138378978 synonymous SNV . 0 32 hm5C_associated_SNPs_29120 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378978 138378978 1 + A C LUSC 138378968 + 138378948 138378988 41 CGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT CGCTCTTGGGACAGGGGGCCCAGCCAGGCCCGAGGTGCTGT < 41bp 1 0.320643875136554 1 0.291575849056244 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378968 chr9:138378978 synonymous SNV . 0 31 hm5C_associated_SNPs_29121 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr17 78346471 78346471 1 + G T LUSC 78346488 + 78346468 78346508 41 GTGGCCCGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTT GTGTCCCGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTT < 41bp 1 0.0384415800384173 1 0.134168326854706 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346488 chr17:78346471 nonsynonymous SNV 0.061 4 4 hm5C_associated_SNPs_29122 0 0 5 DDX24 POSTAR2 ENCODE chr17:78346460-78346494
64251 chr19 35504575 35504575 1 + A G LUSC 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCGGCAGCGA < 41bp 1 0.0242661441727164 1 0.0674387216567993 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504575 nonsynonymous SNV 0.990 0 34 hm5C_associated_SNPs_29125 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35504575 35504575 1 + A G LUSC 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCGGCAGCGACGCAG < 41bp 1 0.77704135437042 1 0.223121166229248 experiment 0.445917291259159 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504575 nonsynonymous SNV 0.990 0 29 hm5C_associated_SNPs_29126 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35504576 35504576 1 + G T LUSC 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCATCAGCGA < 41bp 1 0.0217924319395752 1 0.0338573157787323 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504576 nonsynonymous SNV 0.994 2 35 hm5C_associated_SNPs_29127 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chr19 35504576 35504576 1 + G T LUSC 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCATCAGCGACGCAG < 41bp 1 0.742165534398796 1 0.155957937240601 experiment 0.515668931202408 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504576 nonsynonymous SNV 0.994 2 30 hm5C_associated_SNPs_29128 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chr22 30416154 30416154 1 + G A LUSC 30416167 + 30416147 30416187 41 CCCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCTACAG CCCTTTTAAGACCAGAGGACCAAACGTGGACAGTTCTACAG < 41bp 1 0.126539862024439 1 0.285062670707703 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416167 chr22:30416154 nonsynonymous SNV 0.994 2 8 hm5C_associated_SNPs_29129 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr22:30416101-30416154
64251 chr6 42603239 42603239 1 + A G LUSC 42603221 + 42603201 42603241 41 GAACCAGAGTGGGAAGCAGCCTTCACACTACAAATGAAATT GAACCAGAGTGGGAAGCAGCCTTCACACTACAAATGAAGTT < 41bp 1 0.35749475189811 1 0.217144817113876 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBR2 ENSG00000024048 CDS Human protein_coding chr6:42603221 chr6:42603239 synonymous SNV . 0 39 hm5C_associated_SNPs_29131 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:42603236-42603260
64251 chr3 52237941 52237941 1 + A C LUSC 52237938 + 52237918 52237958 41 TGAAAACCGATGGAGGGGATCCCAGTGGACTGCTGAAGAAC TGAAAACCGATGGAGGGGATCCCCGTGGACTGCTGAAGAAC < 41bp 1 0.46089156476652 1 0.182299077510834 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52237938 chr3:52237941 nonsynonymous SNV 0.212 1 24 hm5C_associated_SNPs_29133 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52237919-52237942
64251 chr5 82868261 82868261 1 + G T LUSC 82868273 + 82868253 82868293 41 CCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG CCCAACCATCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG < 41bp 1 0.0242641711489863 1 0.0202277600765228 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868273 chr5:82868261 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_29141 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868240-82868269
64251 chr5 82868261 82868261 1 + G T LUSC 82868278 + 82868258 82868298 41 CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG CCATCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG < 41bp 1 0.518901377154861 1 0.500447809696198 experiment 0.962197245690277 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868278 chr5:82868261 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_29142 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868240-82868269
64251 chrX 100668167 100668167 1 + G A LUSC 100668159 + 100668139 100668179 41 GTGGTGGCGCTTATGGTAGCCAAATGATGGGAGGGATGGGC GTGGTGGCGCTTATGGTAGCCAAATGATAGGAGGGATGGGC < 41bp 1 0.531309159583025 1 0.849174618721008 experiment 0.937381680833949 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668159 chrX:100668167 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_29144 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:100668164-100668191
64251 chr2 32656044 32656044 1 + G T LUSC 32656029 + 32656009 32656049 41 TTTGACTCCAAGGTTTTCAGCGACTGTTCCTCCATGCTGGG TTTGACTCCAAGGTTTTCAGCGACTGTTCCTCCATTCTGGG < 41bp 1 0.137335474818267 1 0.0557495057582855 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656029 chr2:32656044 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_29145 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr2 32656045 32656045 1 + C T LUSC 32656029 + 32656009 32656049 41 TTTGACTCCAAGGTTTTCAGCGACTGTTCCTCCATGCTGGG TTTGACTCCAAGGTTTTCAGCGACTGTTCCTCCATGTTGGG < 41bp 1 0.129248460231473 1 0.0401951670646667 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656029 chr2:32656045 synonymous SNV . 0 37 hm5C_associated_SNPs_29154 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr2 27459290 27459290 1 + C T LUSC 27459284 + 27459264 27459304 41 CAATGCGTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTC CAATGCGTGGAGCTGGGGGCCGGCGTTTCTCTTCCTTTGTC < 41bp 1 0.565007504242533 1 0.706601798534393 experiment 0.869984991514933 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27459284 chr2:27459290 nonsynonymous SNV 0.988 3 27 hm5C_associated_SNPs_29155 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27459280-27459301
64251 chr5 90083976 90083976 1 + A G LUSC 90083965 + 90083945 90083985 41 GACATTGCAGACCCAGTGAGCGGGTTGTTCTATTTTGGAGA GACATTGCAGACCCAGTGAGCGGGTTGTTCTGTTTTGGAGA < 41bp 1 0.174480048355509 1 0.810165166854858 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90083965 chr5:90083976 nonsynonymous SNV 0.270 1 32 hm5C_associated_SNPs_29156 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr5:90083960-90083980
64251 chr17 74261643 74261643 1 + G A LUSC 74261645 + 74261625 74261665 41 GATCAACCAGTTCGTGCTGGCCGCGGGCTGCGCGGCCGACC GATCAACCAGTTCGTGCTAGCCGCGGGCTGCGCGGCCGACC < 41bp 1 0.695456714899242 1 0.242910772562027 experiment 0.609086570201517 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UBALD2 ENSG00000185262 CDS Human protein_coding chr17:74261645 chr17:74261643 synonymous SNV . 0 19 hm5C_associated_SNPs_29158 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:74261588-74261665
64251 chr17 74261643 74261643 1 + G A LUSC 74261648 + 74261628 74261668 41 CAACCAGTTCGTGCTGGCCGCGGGCTGCGCGGCCGACCAGG CAACCAGTTCGTGCTAGCCGCGGGCTGCGCGGCCGACCAGG < 41bp 1 0.692419166348094 1 0.857524335384369 experiment 0.615161667303812 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UBALD2 ENSG00000185262 CDS Human protein_coding chr17:74261648 chr17:74261643 synonymous SNV . 0 16 hm5C_associated_SNPs_29159 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:74261588-74261665
64251 chr17 74261643 74261643 1 + G A LUSC 74261657 + 74261637 74261677 41 CGTGCTGGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGT CGTGCTAGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGT < 41bp 1 0.638773545062724 1 0.836922526359558 experiment 0.722452909874551 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UBALD2 ENSG00000185262 CDS Human protein_coding chr17:74261657 chr17:74261643 synonymous SNV . 0 7 hm5C_associated_SNPs_29160 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:74261588-74261665
64251 chr17 74261643 74261643 1 + G A LUSC 74261660 + 74261640 74261680 41 GCTGGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGTTGC GCTAGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGTTGC < 41bp 1 0.218693873898177 1 0.205718636512756 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UBALD2 ENSG00000185262 CDS Human protein_coding chr17:74261660 chr17:74261643 synonymous SNV . 0 4 hm5C_associated_SNPs_29161 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:74261588-74261665
64251 chr17 74261643 74261643 1 + G A LUSC 74261661 + 74261641 74261681 41 CTGGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGTTGCT CTAGCCGCGGGCTGCGCGGCCGACCAGGCGAAGCAGTTGCT < 41bp 1 0.287565882714413 1 0.0845721960067749 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UBALD2 ENSG00000185262 CDS Human protein_coding chr17:74261661 chr17:74261643 synonymous SNV . 0 3 hm5C_associated_SNPs_29162 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:74261588-74261665
64251 chr13 88329309 88329309 1 + A T LUSC 88329294 + 88329274 88329314 41 CAGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCATCCAA CAGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCTTCCAA < 41bp 1 0.529680996201785 1 0.614556491374969 experiment 0.940638007596429 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329294 chr13:88329309 nonsynonymous SNV 0.981 1 36 hm5C_associated_SNPs_29163 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr13:88329302-88329321
64251 chr7 5269298 5269298 1 + C G LUSC 5269313 + 5269293 5269333 41 CTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAA CTGCCGCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAA < 41bp 1 0.145456494393877 1 0.0843649804592133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269313 chr7:5269298 nonsynonymous SNV 0.909 1 6 hm5C_associated_SNPs_29164 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:5269282-5269303
64251 chr1 27106838 27106838 1 + C G LUSC 27106819 + 27106799 27106839 41 CCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCACT CCACACCCCCCTTCAGCCGCCTGGAGAAGTTGTATAGCAGT < 41bp 1 0.425839403675215 1 0.55024653673172 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27106819 chr1:27106838 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_29165 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:27106760-27106840
64251 chr15 29385282 29385282 1 + A G LUSC 29385286 + 29385266 29385306 41 GCCCTCCTTCAGTTCCAGGGCCCTGCGAACCAGAAGACCTC GCCCTCCTTCAGTTCCGGGGCCCTGCGAACCAGAAGACCTC < 41bp 1 0.0590076374984649 1 0.190315723419189 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient APBA2 ENSG00000034053 CDS Human protein_coding chr15:29385286 chr15:29385282 synonymous SNV . 0 17 hm5C_associated_SNPs_29166 0 0 3 EFTUD2 POSTAR2 ENCODE chr15:29385273-29385338
64251 chr10 43882414 43882414 1 - T A LUSC 43882399 - 43882379 43882419 41 TTTACAACTTCTTCTCTCCTCTCAACCCTGTGAGAGTCCAT TTTACTACTTCTTCTCTCCTCTCAACCCTGTGAGAGTCCAT < 41bp 1 0.585667614640169 1 0.804824948310852 experiment 0.828664770719662 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882399 chr10:43882414 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_29167 0 0 51 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43882301-43882458
64251 chr12 105543472 105543472 1 + G T LUSC 105543489 + 105543469 105543509 41 CCAGATTGATTAAAGATATTCGATTTTTCAGGGAAATTAAG CCATATTGATTAAAGATATTCGATTTTTCAGGGAAATTAAG < 41bp 1 0.138393259163242 1 0.0857822895050049 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105543489 chr12:105543472 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_29168 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:105543472-105543501
64251 chr6 42854064 42854064 1 + G C LUSC 42854083 + 42854063 42854103 41 AGATCTCATGGTTCTTGTGCCCTTTCCACCTCTCAGTGGCC ACATCTCATGGTTCTTGTGCCCTTTCCACCTCTCAGTGGCC < 41bp 1 0.0151276070415883 1 0.0335967540740967 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL7L1 ENSG00000146223 CDS Human protein_coding chr6:42854083 chr6:42854064 nonsynonymous SNV 0.528 1 2 hm5C_associated_SNPs_29169 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:42854052-42854097
64251 chr22 42042990 42042990 1 + C G LUSC 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTGTATCGG < 41bp 1 0.0904727715575012 1 0.412894308567047 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042990 synonymous SNV . 0 35 hm5C_associated_SNPs_29171 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:42042987-42043006
64251 chr5 140084103 140084103 1 + G A LUSC 140084084 + 140084064 140084104 41 GTGAAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAGA GTGAAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAAA < 41bp 1 0.698677904817894 1 0.324794948101044 experiment 0.602644190364212 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084084 chr5:140084103 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_29173 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084103 140084103 1 + G A LUSC 140084087 + 140084067 140084107 41 AAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAGAGAA AAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAAAGAA < 41bp 1 0.789487732729351 1 0.680905818939209 experiment 0.421024534541299 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084087 chr5:140084103 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_29174 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084103 140084103 1 + G A LUSC 140084109 + 140084089 140084129 41 AGAAGAAGATGGAAGAGAAGCAGAAGGATTATGATTTTGAG AGAAGAAGATGGAAAAGAAGCAGAAGGATTATGATTTTGAG < 41bp 1 0.779870307369201 1 0.491970002651215 experiment 0.440259385261597 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084109 chr5:140084103 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_29175 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr19 14568938 14568938 1 + C T LUSC 14568926 + 14568906 14568946 41 GTGGCCCCAATGCCTGGGACCAGAGCTTCACTCTGGAGCTG GTGGCCCCAATGCCTGGGACCAGAGCTTCACTTTGGAGCTG < 41bp 1 0.500648896602042 1 0.412514567375183 experiment 0.998702206795916 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14568926 chr19:14568938 synonymous SNV . 0 33 hm5C_associated_SNPs_29176 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:14568914-14568943
64251 chr17 62223701 62223701 1 + G A LUSC 62223702 + 62223682 62223722 41 TGTGTGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGA TGTGTGTCGTTGGCGACGCACTGTCTTTGAGCCCCCGCCGA < 41bp 1 0.326973049955118 1 0.0690600275993347 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223702 chr17:62223701 . . 0 20 hm5C_associated_SNPs_29177 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223706 + 62223686 62223726 41 TGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTT TGTCGTTGGCGACGCACTGTCTTTGAGCCCCCGCCGAGCTT < 41bp 1 0.273810323959022 1 0.0939969122409821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223706 chr17:62223701 . . 0 16 hm5C_associated_SNPs_29178 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223713 + 62223693 62223733 41 GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG GGCGACGCACTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG < 41bp 1 0.124161338534744 1 0.0626926124095917 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223713 chr17:62223701 . . 0 9 hm5C_associated_SNPs_29179 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223714 + 62223694 62223734 41 GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG GCGACGCACTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG < 41bp 1 0.288915565579218 1 0.057823657989502 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223714 chr17:62223701 . . 0 8 hm5C_associated_SNPs_29180 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223715 + 62223695 62223735 41 CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC CGACGCACTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC < 41bp 1 0.237998507647646 1 0.0720716416835785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223715 chr17:62223701 . . 0 7 hm5C_associated_SNPs_29181 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223716 + 62223696 62223736 41 GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG GACGCACTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG < 41bp 1 0.115603778392 1 0.0605391561985016 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223716 chr17:62223701 . . 0 6 hm5C_associated_SNPs_29182 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr17 62223701 62223701 1 + G A LUSC 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CACTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG < 41bp 1 0.56110430138081 1 0.504317760467529 experiment 0.877791397238381 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223701 . . 0 2 hm5C_associated_SNPs_29183 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:62223625-62223707
64251 chr19 14562687 14562687 1 + C T LUSC 14562705 + 14562685 14562725 41 ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG ACTATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG < 41bp 1 0.154589273532983 1 0.0795038640499115 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562705 chr19:14562687 synonymous SNV . 0 3 hm5C_associated_SNPs_29184 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:14562686-14562687
64251 chr19 14562687 14562687 1 + C T LUSC 14562706 + 14562686 14562726 41 CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG CTATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG < 41bp 1 0.049806590642684 1 0.171513915061951 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562706 chr19:14562687 synonymous SNV . 0 2 hm5C_associated_SNPs_29185 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:14562686-14562687
64251 chr11 71945345 71945345 1 + C G LUSC 71945331 + 71945311 71945351 41 CCCTTTCTCCTCAGGGCTCTCAAAGACTTCAGACCAGGCCT CCCTTTCTCCTCAGGGCTCTCAAAGACTTCAGACGAGGCCT < 41bp 1 0.316164994105713 1 0.804403066635132 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71945331 chr11:71945345 nonsynonymous SNV 0.992 2 35 hm5C_associated_SNPs_29186 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:71945340-71945360
64251 chr22 37425498 37425498 1 + G C LUSC 37425514 + 37425494 37425534 41 AGTGGTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAG AGTGCTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAG < 41bp 1 0.593084409743075 1 0.542161881923676 experiment 0.813831180513851 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425514 chr22:37425498 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_29187 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr22:37425471-37425498
64251 chr22 37425498 37425498 1 + G C LUSC 37425515 + 37425495 37425535 41 GTGGTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAGG GTGCTACATGCGCGCCCGGCCCGAGGATGTCATCTCAGAGG < 41bp 1 0.428520360555972 1 0.599277973175049 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425515 chr22:37425498 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_29188 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr22:37425471-37425498
64251 chr6 44107280 44107280 1 + C T LUSC 44107298 + 44107278 44107318 41 TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG TGTTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG < 41bp 1 0.379014904671203 1 0.179352074861526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107298 chr6:44107280 synonymous SNV . 0 3 hm5C_associated_SNPs_29189 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:44107247-44107283
64251 chr16 22337554 22337554 1 + A G LUSC 22337560 + 22337540 22337580 41 TCGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTG TCGGACCGCATGCTGCAGGACACGGTGCTGGCCGCCGGTTG < 41bp 1 0.750960184715218 1 0.459197133779526 experiment 0.498079630569563 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337560 chr16:22337554 synonymous SNV . 0 15 hm5C_associated_SNPs_29191 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:22337538-22337560
64251 chr18 48446850 48446850 1 + G T LUSC 48446838 + 48446818 48446858 41 GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCGAAGA GTTTTTAGATATGGCCGGAACACACTCATTCATTTCGAAGA < 41bp 1 0.278771238730626 1 0.137660920619965 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ME2 ENSG00000082212 CDS Human protein_coding chr18:48446838 chr18:48446850 nonsynonymous SNV 0.997 4 33 hm5C_associated_SNPs_29192 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:48446825-48446850
64251 chr1 12027050 12027050 1 + C G LUSC 12027067 + 12027047 12027087 41 TGCCCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC TGCGCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC < 41bp 1 0.483097601163831 1 0.140776306390762 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027067 chr1:12027050 nonsynonymous SNV 0.921 5 4 hm5C_associated_SNPs_29194 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378375 chr1:12027040-12027060
64251 chr12 53671296 53671296 1 + G T LUSC 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT TAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT < 41bp 1 0.0596419120941883 1 0.0492598116397858 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671296 stopgain 1.000 0 1 hm5C_associated_SNPs_29195 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53671268-53671306
64251 chr22 38084982 38084982 1 + G T LUSC 38084995 + 38084975 38085015 41 GCTGCTCGGGCTGACCCCACCTGAGGTGGGTCCCAGTCTCA GCTGCTCTGGCTGACCCCACCTGAGGTGGGTCCCAGTCTCA < 41bp 1 0.794770352890541 1 0.423887431621552 experiment 0.410459294218917 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL12 ENSG00000100101 CDS Human protein_coding chr22:38084995 chr22:38084982 nonsynonymous SNV 0.023 5 8 hm5C_associated_SNPs_29196 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38084927-38084994
64251 chr15 75644693 75644693 1 + C T LUSC 75644692 + 75644672 75644712 41 ATCCCCCCCTTTGAGAAGGCCCGCTCGGTCCTGGAGGCCCT ATCCCCCCCTTTGAGAAGGCCTGCTCGGTCCTGGAGGCCCT < 41bp 1 0.330703421328679 1 0.058122307062149 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75644692 chr15:75644693 nonsynonymous SNV 0.472 4 22 hm5C_associated_SNPs_29197 0 0 3 EFTUD2 POSTAR2 ENCODE chr15:75644639-75644695
64251 chr15 41862286 41862286 1 + G A LUSC 41862285 + 41862265 41862305 41 TGTGGTCCTTGGTGTGCTAACGGCCCTGGTGACGGCTGCTG TGTGGTCCTTGGTGTGCTAACAGCCCTGGTGACGGCTGCTG < 41bp 1 0.66552266373729 1 0.241768836975098 experiment 0.668954672525421 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862285 chr15:41862286 synonymous SNV . 0 22 hm5C_associated_SNPs_29198 0 0 1 PRPF8 POSTAR2 ENCODE chr15:41862269-41862386
64251 chr1 40954798 40954798 1 + C G LUSC 40954785 + 40954765 40954805 41 GTTGACTTTCAAGGACATATCTATTGACTTCACCCAGGAAG GTTGACTTTCAAGGACATATCTATTGACTTCACGCAGGAAG < 41bp 1 0.411711839651884 1 0.100783675909042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP69 ENSG00000187815 CDS Human protein_coding chr1:40954785 chr1:40954798 synonymous SNV . 0 34 hm5C_associated_SNPs_29199 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:40954798-40954799
64251 chr12 31255394 31255394 1 + G T LUSC 31255405 + 31255385 31255425 41 GTGACAGGGGCCCTGCTCCTCTCTGTGGTTGGAGGAAAGAT GTGACAGGGTCCCTGCTCCTCTCTGTGGTTGGAGGAAAGAT < 41bp 1 0.465808864531225 1 0.478331804275513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31255405 chr12:31255394 nonsynonymous SNV 0.814 4 10 hm5C_associated_SNPs_29200 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:31255365-31255404
64251 chr21 48068521 48068521 1 + G T LUSC 48068501 + 48068481 48068521 41 GGGACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCG GGGACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCT < 41bp 1 0.449608803643748 1 0.144956648349762 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068501 chr21:48068521 nonsynonymous SNV 0.002 1 41 hm5C_associated_SNPs_29201 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr21 48068521 48068521 1 + G T LUSC 48068504 + 48068484 48068524 41 ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCGGCC ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCTGCC < 41bp 1 0.706838821708775 1 0.645380735397339 experiment 0.586322356582451 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068504 chr21:48068521 nonsynonymous SNV 0.002 1 38 hm5C_associated_SNPs_29202 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr5 6652021 6652021 1 + G A LUSC 6652008 + 6651988 6652028 41 AAAGCCTATGCCACTGTTGGCGTGTACAATGGCGATTATGT AAAGCCTATGCCACTGTTGGCGTGTACAATGGCAATTATGT < 41bp 1 0.122938938692357 1 0.250874012708664 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6652008 chr5:6652021 synonymous SNV . 0 34 hm5C_associated_SNPs_29203 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6652021-6652047
64251 chr14 23777252 23777252 1 + C T LUSC 23777246 + 23777226 23777266 41 GATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGT GATGAACTTTTTCAAGGGGGCCCCAATTGGGGCCGCCTTGT < 41bp 1 0.446752668593179 1 0.119554072618484 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777246 chr14:23777252 synonymous SNV . 0 27 hm5C_associated_SNPs_29204 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:23777228-23777252
64251 chr14 23777252 23777252 1 + C T LUSC 23777247 + 23777227 23777267 41 ATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTA ATGAACTTTTTCAAGGGGGCCCCAATTGGGGCCGCCTTGTA < 41bp 1 0.376571674305722 1 0.212133049964905 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777247 chr14:23777252 synonymous SNV . 0 26 hm5C_associated_SNPs_29205 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:23777228-23777252
64251 chr14 23777252 23777252 1 + C T LUSC 23777248 + 23777228 23777268 41 TGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTAG TGAACTTTTTCAAGGGGGCCCCAATTGGGGCCGCCTTGTAG < 41bp 1 0.0928997111517722 1 0.164260387420654 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777248 chr14:23777252 synonymous SNV . 0 25 hm5C_associated_SNPs_29206 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:23777228-23777252
64251 chr14 23777252 23777252 1 + C T LUSC 23777249 + 23777229 23777269 41 GAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTAGC GAACTTTTTCAAGGGGGCCCCAATTGGGGCCGCCTTGTAGC < 41bp 1 0.231310773786372 1 0.1883644759655 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777249 chr14:23777252 synonymous SNV . 0 24 hm5C_associated_SNPs_29207 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:23777228-23777252
64251 chr14 23777252 23777252 1 + C T LUSC 23777258 + 23777238 23777278 41 CAAGGGGGCCCCAACTGGGGCCGCCTTGTAGCCTTCTTTGT CAAGGGGGCCCCAATTGGGGCCGCCTTGTAGCCTTCTTTGT < 41bp 1 0.116135487332898 1 0.0438671708106995 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777258 chr14:23777252 synonymous SNV . 0 15 hm5C_associated_SNPs_29208 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:23777228-23777252
64251 chr4 79301038 79301038 1 + C A LUSC 79301019 + 79300999 79301039 41 CTCCTATTTCATGTTGTGAGCACTCCCACCAATGGTCAGCT CTCCTATTTCATGTTGTGAGCACTCCCACCAATGGTCAGAT < 41bp 1 0.0252037853214637 1 0.0721252262592316 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79301019 chr4:79301038 nonsynonymous SNV 0.991 5 40 hm5C_associated_SNPs_29209 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr4:79301018-79301041
64251 chr17 37357551 37357551 1 + G A LUSC 37357571 + 37357551 37357591 41 GAAATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGT AAAATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGT < 41bp 1 0.132287121738123 1 0.0717098712921143 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357571 chr17:37357551 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_29210 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37357505-37357567
64251 chr15 89849348 89849348 1 + C T LUSC 89849336 + 89849316 89849356 41 CATTTTTCCACGAGCTGGTGCAGACAGCTCTGCCATCAGGC CATTTTTCCACGAGCTGGTGCAGACAGCTCTGTCATCAGGC < 41bp 1 0.11748991513463 1 0.330495297908783 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89849336 chr15:89849348 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_29213 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:89849321-89849359
64251 chr12 123892086 123892086 1 + C G LUSC 123892103 + 123892083 123892123 41 AATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCACGA AATGACAGCAAATGTGGGAACTGCCAAACCAAACTGCACGA < 41bp 1 0.456919295173308 1 0.414315581321716 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892103 chr12:123892086 nonsynonymous SNV 0.997 5 4 hm5C_associated_SNPs_29214 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:123892048-123892093
64251 chr3 100059954 100059954 1 + C T LUSC 100059974 + 100059954 100059994 41 CACCTGTGCTGTGTTTGGGCCTGATGGAACTTTACTAGCAA TACCTGTGCTGTGTTTGGGCCTGATGGAACTTTACTAGCAA < 41bp 1 0.39551999143235 1 0.141973227262497 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NIT2 ENSG00000114021 CDS Human protein_coding chr3:100059974 chr3:100059954 synonymous SNV . 0 1 hm5C_associated_SNPs_29215 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:100059952-100059985
64251 chr14 64484359 64484359 1 + T C LUSC 64484376 + 64484356 64484396 41 CTCTAGCTTTGTGGGACAAACTTTTTAACTTAAAAAATGTC CTCCAGCTTTGTGGGACAAACTTTTTAACTTAAAAAATGTC < 41bp 1 0.0445768600814954 1 0.105151683092117 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64484376 chr14:64484359 nonsynonymous SNV 0.994 3 4 hm5C_associated_SNPs_29216 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr14:64484340-64484361
64251 chr1 29069421 29069421 1 + C T LUSC 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGTGGGTCCATTACTAGTAACATCGTGGC < 41bp 1 0.283090093469055 1 0.157625079154968 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069421 synonymous SNV . 0 15 hm5C_associated_SNPs_29218 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:29069420-29069440
64251 chr12 7080158 7080158 1 + T G LUSC 7080174 + 7080154 7080194 41 ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAAC ATGCGCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAAC < 41bp 1 0.232338758676347 1 0.0521124303340912 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080174 chr12:7080158 synonymous SNV . 0 5 hm5C_associated_SNPs_29220 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:7080120-7080160
64251 chr12 7080158 7080158 1 + T G LUSC 7080176 + 7080156 7080196 41 GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA GCGCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA < 41bp 1 0.158601003785642 1 0.0466203689575195 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080176 chr12:7080158 synonymous SNV . 0 3 hm5C_associated_SNPs_29221 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:7080120-7080160
64251 chr12 7080158 7080158 1 + T G LUSC 7080177 + 7080157 7080197 41 CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG CGCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG < 41bp 1 0.378850675470651 1 0.102057635784149 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080177 chr12:7080158 synonymous SNV . 0 2 hm5C_associated_SNPs_29222 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:7080120-7080160
64251 chr12 7080195 7080195 1 + A G LUSC 7080176 + 7080156 7080196 41 GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACGA < 41bp 1 0.171397788919208 1 0.056992381811142 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080176 chr12:7080195 nonsynonymous SNV 0.996 0 40 hm5C_associated_SNPs_29224 0 0 3 BUD13 POSTAR2 ENCODE chr12:7080194-7080211
64251 chr12 7080195 7080195 1 + A G LUSC 7080177 + 7080157 7080197 41 CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACGAG < 41bp 1 0.403484394719327 1 0.128461629152298 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080177 chr12:7080195 nonsynonymous SNV 0.996 0 39 hm5C_associated_SNPs_29225 0 0 3 BUD13 POSTAR2 ENCODE chr12:7080194-7080211
64251 chr19 54652144 54652144 1 + A G LUSC 54652142 + 54652122 54652162 41 AGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCA AGCTCCCAGTGGGCCCAGCACGGCCCAGCCCCGGCCCCCCA < 41bp 1 0.745331153569671 1 0.658331334590912 experiment 0.509337692860658 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652142 chr19:54652144 nonsynonymous SNV 0.698 0 23 hm5C_associated_SNPs_29226 0 0 2 HNRNPK POSTAR2 ENCODE chr19:54652060-54652199
64251 chrX 41089015 41089015 1 + G T LUSC 41089020 + 41089000 41089040 41 CTTGCAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAA CTTGCAAAAGCTTGTTAACTCTGTCCAGAGGAGGTAAAAAA < 41bp 1 0.0978664387973239 1 0.290596961975098 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089020 chrX:41089015 stopgain 1.000 1 16 hm5C_associated_SNPs_29227 0 0 1 CDC40 POSTAR2 ENCODE chrX:41088970-41089033
64251 chrX 41089015 41089015 1 + G T LUSC 41089025 + 41089005 41089045 41 AAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAAAGCCA AAAAGCTTGTTAACTCTGTCCAGAGGAGGTAAAAAAAGCCA < 41bp 1 0.19821071422794 1 0.771965086460114 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089025 chrX:41089015 stopgain 1.000 1 11 hm5C_associated_SNPs_29228 0 0 1 CDC40 POSTAR2 ENCODE chrX:41088970-41089033
64251 chr19 55997930 55997930 1 + C T LUSC 55997926 + 55997906 55997946 41 GCCGGTGTTCCTGGCTGTGGCCGCCGTGAAGCTGGGCCTGC GCCGGTGTTCCTGGCTGTGGCCGCTGTGAAGCTGGGCCTGC < 41bp 1 0.607852195707458 1 0.298079252243042 experiment 0.784295608585085 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT14 ENSG00000090971 CDS Human protein_coding chr19:55997926 chr19:55997930 synonymous SNV . 0 25 hm5C_associated_SNPs_29230 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:55997930-55997931
64251 chr19 55997930 55997930 1 + C T LUSC 55997929 + 55997909 55997949 41 GGTGTTCCTGGCTGTGGCCGCCGTGAAGCTGGGCCTGCGGG GGTGTTCCTGGCTGTGGCCGCTGTGAAGCTGGGCCTGCGGG < 41bp 1 0.542984998018704 1 0.510546863079071 experiment 0.914030003962591 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NAT14 ENSG00000090971 CDS Human protein_coding chr19:55997929 chr19:55997930 synonymous SNV . 0 22 hm5C_associated_SNPs_29231 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:55997930-55997931
64251 chr5 34936297 34936297 1 + G C LUSC 34936300 + 34936280 34936320 41 AAATGATTGCCAAGGAAGAACTAGAATCTGTGTTAGAGGAA AAATGATTGCCAAGGAACAACTAGAATCTGTGTTAGAGGAA < 41bp 1 0.743414940695512 1 0.473103225231171 experiment 0.513170118608976 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34936300 chr5:34936297 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_29232 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34936253-34936327
64251 chr7 116829385 116829385 1 + A G LUSC 116829387 + 116829367 116829407 41 TCCAACAGATATAAGCTTACCAAAGTCAGCAACAATATGCT TCCAACAGATATAAGCTTGCCAAAGTCAGCAACAATATGCT < 41bp 1 0.216324468636017 1 0.678213834762573 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ST7 ENSG00000004866 CDS Human protein_coding chr7:116829387 chr7:116829385 synonymous SNV . 0 19 hm5C_associated_SNPs_29233 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:116829381-116829405
64251 chr17 73058246 73058246 1 + G A LUSC 73058257 + 73058237 73058277 41 ATAACTACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT ATAACTACGACAATGAGGATCAGGCAGAATTCCTCTGTGTT < 41bp 1 0.182924657579455 1 0.454549312591553 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73058257 chr17:73058246 nonsynonymous SNV 0.999 4 10 hm5C_associated_SNPs_29234 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:73058246-73058273
64251 chr11 66610673 66610673 1 + T C LUSC 66610663 + 66610643 66610683 41 GTGCTGTGGCTGCAGGAGGTCTCCAACCTGTCAGAGTGGCT GTGCTGTGGCTGCAGGAGGTCTCCAACCTGCCAGAGTGGCT < 41bp 1 0.690492879432926 1 0.911532461643219 experiment 0.619014241134147 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66610663 chr11:66610673 nonsynonymous SNV 0.986 3 31 hm5C_associated_SNPs_29237 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:66610637-66610674
64251 chr15 42052717 42052717 1 + T A LUSC 42052715 + 42052695 42052735 41 TCCAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT TCCAAGGTTTCCAAAAGTCTCAATCTTACTCGAGTAAGTGT < 41bp 1 0.0457718085986026 1 0.0687389969825745 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42052715 chr15:42052717 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_29239 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr15:42052713-42052734
64251 chr20 25187723 25187723 1 + C T LUSC 25187712 + 25187692 25187732 41 CTCTCCCCCCTTCCCACCAGCAGCCGCAGCACGGTCCTTGG CTCTCCCCCCTTCCCACCAGCAGCCGCAGCATGGTCCTTGG < 41bp 1 0.386289205818406 1 0.370169401168823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187712 chr20:25187723 synonymous SNV . 0 32 hm5C_associated_SNPs_29240 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:25187722-25187723
64251 chr1 28159279 28159279 1 + C T LUSC 28159277 + 28159257 28159297 41 TATTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTG TATTTTTCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTG < 41bp 1 0.0850945927081933 1 0.470963329076767 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159277 chr1:28159279 synonymous SNV . 0 23 hm5C_associated_SNPs_29241 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159278 + 28159258 28159298 41 ATTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGG ATTTTTCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGG < 41bp 1 0.3893491503865 1 0.831571340560913 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159278 chr1:28159279 synonymous SNV . 0 22 hm5C_associated_SNPs_29242 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159280 + 28159260 28159300 41 TTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGAT TTTTCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGAT < 41bp 1 0.0814713011046863 1 0.0487513840198517 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159280 chr1:28159279 synonymous SNV . 0 20 hm5C_associated_SNPs_29243 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159281 + 28159261 28159301 41 TTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATG TTTCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGATG < 41bp 1 0.302490782505801 1 0.0551595389842987 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159281 chr1:28159279 synonymous SNV . 0 19 hm5C_associated_SNPs_29244 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159283 + 28159263 28159303 41 TCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTA TCAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGATGTA < 41bp 1 0.640271147572068 1 0.345185458660126 experiment 0.719457704855864 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159283 chr1:28159279 synonymous SNV . 0 17 hm5C_associated_SNPs_29245 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159284 + 28159264 28159304 41 CAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTAG CAGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGATGTAG < 41bp 1 0.392359622875141 1 0.212592899799347 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159284 chr1:28159279 synonymous SNV . 0 16 hm5C_associated_SNPs_29246 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159279 28159279 1 + C T LUSC 28159285 + 28159265 28159305 41 AGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTAGT AGGGCAGGTAAGCCTCCTCCCGGTTTACATCTGGATGTAGT < 41bp 1 0.285262067303991 1 0.426471889019012 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159285 chr1:28159279 synonymous SNV . 0 15 hm5C_associated_SNPs_29247 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr11 45948283 45948283 1 + C T LUSC 45948298 + 45948278 45948318 41 CACAACTGGACGAGGAAGACCCCTGCTTTGAGTTCCGGCAG CACAATTGGACGAGGAAGACCCCTGCTTTGAGTTCCGGCAG < 41bp 1 0.245125737029628 1 0.633621037006378 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45948298 chr11:45948283 synonymous SNV . 0 6 hm5C_associated_SNPs_29248 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:45948259-45948289
64251 chr3 58092592 58092592 1 + C T LUSC 58092593 + 58092573 58092613 41 AGCCACGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGC AGCCACGGGAGGCTACAACTCTGATCTGGTGAATCAGCTGC < 41bp 1 0.450106198651117 1 0.325373470783234 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092593 chr3:58092592 nonsynonymous SNV 0.998 1 20 hm5C_associated_SNPs_29249 0 0 2 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr3 58092592 58092592 1 + C T LUSC 58092598 + 58092578 58092618 41 CGGGAGGCTACAACCCTGATCTGGTGAATCAGCTGCTGTGC CGGGAGGCTACAACTCTGATCTGGTGAATCAGCTGCTGTGC < 41bp 1 0.509365081123178 1 0.152396887540817 experiment 0.981269837753645 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58092598 chr3:58092592 nonsynonymous SNV 0.998 1 15 hm5C_associated_SNPs_29250 0 0 2 DDX24 POSTAR2 ENCODE chr3:58092503-58092602
64251 chr20 3781952 3781952 1 + C T LUSC 3781963 + 3781943 3781983 41 CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG CCCCTGGCCTTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG < 41bp 1 0.182124967692387 1 0.589261174201965 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781963 chr20:3781952 synonymous SNV . 0 10 hm5C_associated_SNPs_29252 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:3781921-3781953
64251 chr1 183091288 183091288 1 + C T LUSC 183091283 + 183091263 183091303 41 GGAGATTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTG GGAGATTCAACTGCAGGCACCTCCTTCGATTGCCAACCCTG < 41bp 1 0.154019909000203 1 0.107446640729904 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091283 chr1:183091288 nonsynonymous SNV 0.940 0 26 hm5C_associated_SNPs_29256 0 0 3 LIN28B POSTAR2 ENCODE chr1:183091238-183091288
64251 chr16 29851519 29851519 1 + C T LUSC 29851532 + 29851512 29851552 41 TTTTCCTCCAGCCAGGAGAGCAGCTGGAACAAGGCATCCAG TTTTCCTTCAGCCAGGAGAGCAGCTGGAACAAGGCATCCAG < 41bp 1 0.472261958045977 1 0.438630402088165 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29851532 chr16:29851519 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_29257 0 0 2 RPS3 POSTAR2 ENCODE chr16:29851516-29851582
64251 chr1 164790808 164790808 1 + G A LUSC 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAGACAGAAGGATACAGTGATGGACTCGCAGCCAG < 41bp 1 0.643239285670352 1 0.386804282665253 experiment 0.713521428659297 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790808 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_29258 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr17 1747903 1747903 1 + C T LUSC 1747884 + 1747864 1747904 41 GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTCTCG GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTCTTG < 41bp 1 0.639992622829628 1 0.180166810750961 experiment 0.720014754340743 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1747884 chr17:1747903 synonymous SNV . 0 40 hm5C_associated_SNPs_29259 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1747869-1747959
64251 chr19 37853764 37853764 1 + C T LUSC 37853759 + 37853739 37853779 41 CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA CAGCGGACACACTCAGGGCTCAAGCTTTATGTGTGCAAGGA < 41bp 1 0.380565126933057 1 0.138152658939362 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853759 chr19:37853764 nonsynonymous SNV 0.979 3 26 hm5C_associated_SNPs_29260 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr16 4700463 4700463 1 + C T LUSC 4700472 + 4700452 4700492 41 GATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCT GATCTGAACTTTCTGGGCAGCCGCCCGGTCCAGGTGGGTCT < 41bp 1 0.0940700627179087 1 0.106842458248138 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700472 chr16:4700463 synonymous SNV . 0 12 hm5C_associated_SNPs_29261 0 0 4 BUD13 POSTAR2 ENCODE chr16:4700457-4700565
64251 chr5 72798834 72798834 1 + C T LUSC 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CATTACAGGCTATGCTGAGACAAAGCAGCTGACAGAAATGC < 41bp 1 0.620484198751193 1 0.363069653511047 experiment 0.759031602497614 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798834 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_29263 0 0 27 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr5 175933835 175933835 1 + C T LUSC 175933837 + 175933817 175933857 41 CAGATTGAAGCCAATTTTCCCAGGCGAGTGCTGCCCTGCAT CAGATTGAAGCCAATTTTTCCAGGCGAGTGCTGCCCTGCAT < 41bp 1 0.694550036603567 1 0.868500471115112 experiment 0.610899926792865 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933837 chr5:175933835 nonsynonymous SNV 0.997 4 19 hm5C_associated_SNPs_29265 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr5 175933835 175933835 1 + C T LUSC 175933855 + 175933835 175933875 41 CCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC TCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC < 41bp 1 0.114440371721481 1 0.0869822204113007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933855 chr5:175933835 nonsynonymous SNV 0.997 4 1 hm5C_associated_SNPs_29266 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr17 78321325 78321325 1 + C T LUSC 78321328 + 78321308 78321348 41 CATTCTTCGAGGGGGACCAGCAGCCGGAGATTATTTTTGGT CATTCTTCGAGGGGGACTAGCAGCCGGAGATTATTTTTGGT < 41bp 1 0.122960498330236 1 0.579454839229584 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321328 chr17:78321325 stopgain 0.422 0 18 hm5C_associated_SNPs_29267 0 0 5 FMR1 POSTAR2 ENCODE chr17:78321283-78321353
64251 chr13 113459345 113459345 1 + C T LUSC 113459327 + 113459307 113459347 41 GAACAATTCAGAAGAGTAGCCAACTTTTATTTCCTTATCAT GAACAATTCAGAAGAGTAGCCAACTTTTATTTCCTTATTAT < 41bp 1 0.0865604325498949 1 0.120345741510391 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ATP11A ENSG00000068650 CDS Human protein_coding chr13:113459327 chr13:113459345 synonymous SNV . 0 39 hm5C_associated_SNPs_29268 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714641 chr13:113459315-113459351
64251 chr1 28159278 28159278 1 + C T LUSC 28159277 + 28159257 28159297 41 TATTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTG TATTTTTCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTG < 41bp 1 0.359049597812901 1 0.39692023396492 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159277 chr1:28159278 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_29269 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159279 + 28159259 28159299 41 TTTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGA TTTTTCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGA < 41bp 1 0.0983199551951231 1 0.122031956911087 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159279 chr1:28159278 nonsynonymous SNV 0.996 4 20 hm5C_associated_SNPs_29270 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159280 + 28159260 28159300 41 TTTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGAT TTTTCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGAT < 41bp 1 0.064707099614726 1 0.0674471259117126 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159280 chr1:28159278 nonsynonymous SNV 0.996 4 19 hm5C_associated_SNPs_29271 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159281 + 28159261 28159301 41 TTTCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATG TTTCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGATG < 41bp 1 0.385380719327919 1 0.0422553420066833 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159281 chr1:28159278 nonsynonymous SNV 0.996 4 18 hm5C_associated_SNPs_29272 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159283 + 28159263 28159303 41 TCAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTA TCAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGATGTA < 41bp 1 0.593286680873816 1 0.239507049322128 experiment 0.813426638252368 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159283 chr1:28159278 nonsynonymous SNV 0.996 4 16 hm5C_associated_SNPs_29273 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159284 + 28159264 28159304 41 CAGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTAG CAGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGATGTAG < 41bp 1 0.378476257625227 1 0.158987760543823 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159284 chr1:28159278 nonsynonymous SNV 0.996 4 15 hm5C_associated_SNPs_29274 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr1 28159278 28159278 1 + C T LUSC 28159285 + 28159265 28159305 41 AGGGCAGGTAAGCCCCCTCCCGGTTTACATCTGGATGTAGT AGGGCAGGTAAGCTCCCTCCCGGTTTACATCTGGATGTAGT < 41bp 1 0.279404807623189 1 0.266636967658997 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28159285 chr1:28159278 nonsynonymous SNV 0.996 4 14 hm5C_associated_SNPs_29275 0 0 4 BUD13 POSTAR2 ENCODE chr1:28159261-28159298
64251 chr19 39860353 39860353 1 + C T LUSC 39860363 + 39860343 39860383 41 TCCTGCTGTCCCACCTTCCCCTGCTTCAGCCAGGCAACACA TCCTGCTGTCTCACCTTCCCCTGCTTCAGCCAGGCAACACA < 41bp 1 0.423511515932666 1 0.209067523479462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860363 chr19:39860353 synonymous SNV . 0 11 hm5C_associated_SNPs_29277 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:39860338-39860365
64251 chr19 39860353 39860353 1 + C T LUSC 39860373 + 39860353 39860393 41 CCACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT TCACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT < 41bp 1 0.477652743156912 1 0.541096210479736 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860373 chr19:39860353 synonymous SNV . 0 1 hm5C_associated_SNPs_29278 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:39860338-39860365
64251 chr20 3781951 3781951 1 + C T LUSC 3781963 + 3781943 3781983 41 CCCCTGGCCCTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG CCCCTGGCTCTAGGTCGCTTCTCTCTGACCCCTGCAGAGGG < 41bp 1 0.186554405420898 1 0.700646162033081 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781963 chr20:3781951 synonymous SNV . 0 9 hm5C_associated_SNPs_29279 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:3781921-3781953
64251 chr19 39215157 39215157 1 + C T LUSC 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGCGCCGCCAGTTTGCCAGCCAGGCCAATGTTGTGGGGCC < 41bp 1 0.303340114911917 1 0.785703897476196 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215157 synonymous SNV . 0 15 hm5C_associated_SNPs_29280 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr19 39215157 39215157 1 + C T LUSC 39215169 + 39215149 39215189 41 CGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT CGCCAGTTTGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT < 41bp 1 0.270402974095775 1 0.08881875872612 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215169 chr19:39215157 synonymous SNV . 0 9 hm5C_associated_SNPs_29281 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr2 32666418 32666418 1 + A T LUSC 32666438 + 32666418 32666458 41 AATGAAAATACAAGTGGCACCCGTAAATCTGAAAACCTCCG TATGAAAATACAAGTGGCACCCGTAAATCTGAAAACCTCCG < 41bp 1 0.0401067832982818 1 0.424582988023758 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32666438 chr2:32666418 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_29282 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:32666400-32666420
64251 chr16 2284196 2284196 1 + A G LUSC 2284209 + 2284189 2284229 41 TGCGCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCT TGCGCGCGGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCT < 41bp 1 0.0594601152444705 1 0.1412692964077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284209 chr16:2284196 nonsynonymous SNV 0.863 0 8 hm5C_associated_SNPs_29283 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:2284079-2284199
64251 chr16 2284196 2284196 1 + A G LUSC 2284212 + 2284192 2284232 41 GCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCTCAA GCGCGGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCTCAA < 41bp 1 0.646469317020565 1 0.200860261917114 experiment 0.70706136595887 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284212 chr16:2284196 nonsynonymous SNV 0.863 0 5 hm5C_associated_SNPs_29284 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:2284079-2284199
64251 chr12 109629527 109629527 1 + G A LUSC 109629531 + 109629511 109629551 41 CCAGAACAACGACATCGACACCGGGTGGTTGGACTACCTCA CCAGAACAACGACATCAACACCGGGTGGTTGGACTACCTCA < 41bp 1 0.347225104516806 1 0.731180012226105 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109629531 chr12:109629527 nonsynonymous SNV 0.450 4 17 hm5C_associated_SNPs_29285 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:109629527-109629554
64251 chr16 81654514 81654514 1 + C T LUSC 81654513 + 81654493 81654533 41 TACCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAAGGT TACCTGCGAGACCAGTGGTTCTATTCTCTGCAATGGAAGGT < 41bp 1 0.0454780528480105 1 0.0868176519870758 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CMIP ENSG00000153815 CDS Human protein_coding chr16:81654513 chr16:81654514 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_29286 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:81654488-81654522
64251 chrX 149905133 149905133 1 + C T LUSC 149905115 + 149905095 149905135 41 GTGCTTACCCAAATGCAGAACTTGTGTTCTTGGAGATCCAC GTGCTTACCCAAATGCAGAACTTGTGTTCTTGGAGATCTAC < 41bp 1 0.128162746541938 1 0.0456609129905701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905115 chrX:149905133 nonsynonymous SNV 0.998 4 39 hm5C_associated_SNPs_29287 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:149905104-149905139
64251 chr9 131669688 131669688 1 + C T LUSC 131669678 + 131669658 131669698 41 GGGCAGCCCCTGGCCCGGAGCCCACCTACCCCAACTCCACC GGGCAGCCCCTGGCCCGGAGCCCACCTACCTCAACTCCACC < 41bp 1 0.0768486150555772 1 0.225367069244385 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669678 chr9:131669688 nonsynonymous SNV 0.674 0 31 hm5C_associated_SNPs_29288 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:131669677-131669704
64251 chr14 20822281 20822281 1 + C G LUSC 20822301 + 20822281 20822321 41 CTCCCTTGAAGCCAGAGTCACAGCTAGATCTTCGGGTACAG GTCCCTTGAAGCCAGAGTCACAGCTAGATCTTCGGGTACAG < 41bp 1 0.480812635332624 1 0.280977725982666 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARP2 ENSG00000129484 CDS Human protein_coding chr14:20822301 chr14:20822281 nonsynonymous SNV 0.822 0 1 hm5C_associated_SNPs_29289 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr14:20822268-20822288
64251 chr6 32123555 32123555 1 + A G LUSC 32123537 + 32123517 32123557 41 TTCTTTCATCTCCCTCTCCTCTCCACAGATGGGACAGTATG TTCTTTCATCTCCCTCTCCTCTCCACAGATGGGACAGTGTG < 41bp 1 0.691291780664513 1 0.947803735733032 experiment 0.617416438670974 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control PPT2 ENSG00000221988;ENSG00000258388 CDS Human other chr6:32123537 chr6:32123555 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_29290 0 0 6 BUD13 POSTAR2 ENCODE chr6:32123511-32123562
64251 chr5 139893001 139893001 1 + C A LUSC 139893005 + 139892985 139893025 41 TTGTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG TTGTGAAGGCTAAAGAACAGCAAGCTGCAGAAGCAAATAAG < 41bp 1 0.18816564612212 1 0.358239591121674 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139893005 chr5:139893001 nonsynonymous SNV 0.991 3 17 hm5C_associated_SNPs_29291 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:139892980-139893002
64251 chr3 15262296 15262296 1 + C T LUSC 15262290 + 15262270 15262310 41 TGTTCCTCTCTGTTATAGAGCAGAAGCGCTGAGTGAGCCTT TGTTCCTCTCTGTTATAGAGCAGAAGTGCTGAGTGAGCCTT < 41bp 1 0.75297495035622 1 0.082782655954361 experiment 0.494050099287561 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15262290 chr3:15262296 nonsynonymous SNV 0.994 0 27 hm5C_associated_SNPs_29292 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:15262285-15262327
64251 chr9 131843434 131843434 1 + G T LUSC 131843453 + 131843433 131843473 41 CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC CTCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC < 41bp 1 0.34330837761143 1 0.421691328287125 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843453 chr9:131843434 synonymous SNV . 0 2 hm5C_associated_SNPs_29293 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr10 45486408 45486408 1 + T G LUSC 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAAAATGAAAAGACTGC < 41bp 1 0.0752487181593792 1 0.289820343255997 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486408 stopgain 1.000 1 31 hm5C_associated_SNPs_29295 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr7 101845120 101845120 1 + G T LUSC 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACGGGCGTCGGGAAAGAGAAGGGCAG < 41bp 1 0.124369893241709 1 0.401083588600159 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845120 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_29298 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr3 20019841 20019841 1 + A G LUSC 20019825 + 20019805 20019845 41 GCACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA GCACAGTCCTATGCAGATGACAATAGTTTATTATTCGTGGA < 41bp 1 0.508938689208916 1 0.139919310808182 experiment 0.982122621582168 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019825 chr3:20019841 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_29299 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:20019823-20019853
64251 chr5 21501807 21501807 1 + C G LUSC 21501804 + 21501784 21501824 41 TTTGCCTTGAATCCCAGGATCCACCTTGATGTTCAGTGAAG TTTGCCTTGAATCCCAGGATCCAGCTTGATGTTCAGTGAAG < 41bp 1 0.132302966927298 1 0.0491733551025391 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21501804 chr5:21501807 . . 0 24 hm5C_associated_SNPs_29301 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:21501805-21501843
64251 chr3 179424775 179424775 1 + G T LUSC 179424778 + 179424758 179424798 41 TCTCCATACAGAAAGCAGGACCCAGACACGTGGGAAAATGA TCTCCATACAGAAAGCATGACCCAGACACGTGGGAAAATGA < 41bp 1 0.0756846331473705 1 0.0663194060325623 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179424778 chr3:179424775 nonsynonymous SNV 0.996 3 18 hm5C_associated_SNPs_29302 0 0 1 GRWD1 POSTAR2 ENCODE chr3:179424722-179424783
64251 chr17 53014037 53014037 1 + G A LUSC 53014053 + 53014033 53014073 41 TTTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA TTTTAGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA < 41bp 1 0.664306814269484 1 0.572838187217712 experiment 0.671386371461031 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014053 chr17:53014037 synonymous SNV . 0 5 hm5C_associated_SNPs_29303 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:53014007-53014039
64251 chr1 109642935 109642935 1 + G C LUSC 109642927 + 109642907 109642947 41 CGCGTGAGTGTGTGAGTGTGCGCGCTTGGAGCGTGTTAGGC CGCGTGAGTGTGTGAGTGTGCGCGCTTGCAGCGTGTTAGGC < 41bp 1 0.642679903178422 1 0.136819839477539 experiment 0.714640193643156 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642927 chr1:109642935 . . 0 29 hm5C_associated_SNPs_29304 0 0 71 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642935 109642935 1 + G C LUSC 109642938 + 109642918 109642958 41 GTGAGTGTGCGCGCTTGGAGCGTGTTAGGCGAGTGCGTGCG GTGAGTGTGCGCGCTTGCAGCGTGTTAGGCGAGTGCGTGCG < 41bp 1 0.568255823188256 1 0.444357395172119 experiment 0.863488353623488 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642938 chr1:109642935 . . 0 18 hm5C_associated_SNPs_29305 0 0 71 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642935 109642935 1 + G C LUSC 109642947 + 109642927 109642967 41 CGCGCTTGGAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCT CGCGCTTGCAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCT < 41bp 1 0.743160990617379 1 0.758097767829895 experiment 0.513678018765243 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642947 chr1:109642935 . . 0 9 hm5C_associated_SNPs_29306 0 0 71 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642935 109642935 1 + G C LUSC 109642953 + 109642933 109642973 41 TGGAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCTGCGCCC TGCAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCTGCGCCC < 41bp 1 0.576273885309565 1 0.47759023308754 experiment 0.84745222938087 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642953 chr1:109642935 . . 0 3 hm5C_associated_SNPs_29307 0 0 71 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr9 80858453 80858453 1 + G T LUSC 80858436 + 80858416 80858456 41 GAGTCTTCGCTATAGGAGACCTGATCTTGACTGTATGGCTG GAGTCTTCGCTATAGGAGACCTGATCTTGACTGTATGTCTG < 41bp 1 0.330728235189065 1 0.0529457926750183 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP78 ENSG00000148019 CDS Human protein_coding chr9:80858436 chr9:80858453 nonsynonymous SNV 0.998 2 38 hm5C_associated_SNPs_29308 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:80858438-80858466
64251 chr3 127335943 127335943 1 + C T LUSC 127335929 + 127335909 127335949 41 GGGCCCTGGTTCTGGCTGACCGAGGAGTGTGTCTCATTGAT GGGCCCTGGTTCTGGCTGACCGAGGAGTGTGTCTTATTGAT < 41bp 1 0.699797931923965 1 0.758516728878021 experiment 0.600404136152071 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127335929 chr3:127335943 synonymous SNV . 0 35 hm5C_associated_SNPs_29309 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr3:127335895-127335947
64251 chr19 36113809 36113809 1 + G C LUSC 36113820 + 36113800 36113840 41 GCCCTCTCTGAGGAGCTCTGCCAGGGCCTGTCCCTGCCCCA GCCCTCTCTCAGGAGCTCTGCCAGGGCCTGTCCCTGCCCCA < 41bp 1 0.621589638317009 1 0.546387374401093 experiment 0.756820723365983 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36113820 chr19:36113809 nonsynonymous SNV 0.106 0 10 hm5C_associated_SNPs_29312 0 0 4 BUD13 POSTAR2 ENCODE chr19:36113776-36113811
64251 chr19 33586724 33586724 1 + G C LUSC 33586722 + 33586702 33586742 41 CCCTGGAAGCTCGGAAGGATCTGAGGTATTGCATGGTGTGA CCCTGGAAGCTCGGAAGGATCTCAGGTATTGCATGGTGTGA < 41bp 1 0.740864378244254 1 0.179057151079178 experiment 0.518271243511492 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33586722 chr19:33586724 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_29313 0 0 3 BUD13 POSTAR2 ENCODE chr19:33586695-33586727
64251 chr5 149751728 149751728 1 + G A LUSC 149751738 + 149751718 149751758 41 CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT CAAGAAGCCAAAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT < 41bp 1 0.309406457919195 1 0.654821693897247 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751738 chr5:149751728 nonsynonymous SNV 0.259 0 11 hm5C_associated_SNPs_29314 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr3 186302269 186302269 1 + G C LUSC 186302256 + 186302236 186302276 41 TAAGATCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGG TAAGATCACCAGGCCAGGAGCGAAGCTATGGAACAAAGGGG < 41bp 1 0.329953507137883 1 0.396906077861786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302256 chr3:186302269 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_29315 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:186302235-186302275
64251 chr3 186302269 186302269 1 + G C LUSC 186302261 + 186302241 186302281 41 TCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGGAAGGG TCACCAGGCCAGGAGCGAAGCTATGGAACAAAGGGGAAGGG < 41bp 1 0.424866263662923 1 0.118182748556137 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302261 chr3:186302269 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_29316 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:186302235-186302275
64251 chr8 124146371 124146371 1 + A T LUSC 124146369 + 124146349 124146389 41 CATAGGTATATATGAGAGATCGAGAAATTGCTGCCACAGCC CATAGGTATATATGAGAGATCGTGAAATTGCTGCCACAGCC < 41bp 1 0.647551424382993 1 0.541770696640015 experiment 0.704897151234014 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124146369 chr8:124146371 synonymous SNV . 0 23 hm5C_associated_SNPs_29317 0 0 1 ZNF622 POSTAR2 ENCODE chr8:124146357-124146423
64251 chr5 149751721 149751721 1 + G T LUSC 149751738 + 149751718 149751758 41 CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT CAATAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT < 41bp 1 0.328704228790913 1 0.554904043674469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751738 chr5:149751721 nonsynonymous SNV 0.001 2 4 hm5C_associated_SNPs_29318 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr5 102472516 102472516 1 + A T LUSC 102472507 + 102472487 102472527 41 TAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGG TAATCAATGACTTGAATATGCAGTATCTCTTACAAGATAGG < 41bp 1 0.345679380180501 1 0.175760924816132 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102472507 chr5:102472516 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_29319 0 0 1 ZNF622 POSTAR2 ENCODE chr5:102472471-102472526
64251 chr13 114541067 114541067 1 - G C LUSC 114541049 - 114541029 114541069 41 CTCTCCTCTGATGGCAGGACCTGCCAAGGTAAGGCCCTGGG CTGTCCTCTGATGGCAGGACCTGCCAAGGTAAGGCCCTGGG < 41bp 1 0.290643647087885 1 0.0919685661792755 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541049 chr13:114541067 synonymous SNV . 0 3 hm5C_associated_SNPs_29320 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:114541046-114541069
64251 chr13 114541067 114541067 1 - G C LUSC 114541062 - 114541042 114541082 41 CAGCGGCTTCGAGCTCTCCTCTGATGGCAGGACCTGCCAAG CAGCGGCTTCGAGCTGTCCTCTGATGGCAGGACCTGCCAAG < 41bp 1 0.555083597298836 1 0.441971242427826 experiment 0.889832805402327 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541062 chr13:114541067 synonymous SNV . 0 16 hm5C_associated_SNPs_29321 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:114541046-114541069
64251 chr2 128184749 128184749 1 + G A LUSC 128184754 + 128184734 128184774 41 CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGATGAGT CCCCTCCTGGGTGCTAACAGCGGCCCACTGCATGGATGAGT < 41bp 1 0.335146534687349 1 0.369492590427399 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128184754 chr2:128184749 synonymous SNV . 0 16 hm5C_associated_SNPs_29322 0 0 3 BUD13 POSTAR2 ENCODE chr2:128184700-128184754
64251 chr17 48166608 48166608 1 + G T LUSC 48166618 + 48166598 48166638 41 CCAGCTGGCAGACTCGGGACCAATACTACTGACGTCCTCCC CCAGCTGGCATACTCGGGACCAATACTACTGACGTCCTCCC < 41bp 1 0.338581924155923 1 0.0740518271923065 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48166618 chr17:48166608 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_29323 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48166584-48166627
64251 chr2 63834097 63834097 1 + T A LUSC 63834096 + 63834076 63834116 41 GACAGAAGAAAAAGAAAGTGCTTTTGAATTTCTTTCCTCTG GACAGAAGAAAAAGAAAGTGCATTTGAATTTCTTTCCTCTG < 41bp 1 0.0740516980452779 1 0.0693476498126984 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834096 chr2:63834097 synonymous SNV . 0 22 hm5C_associated_SNPs_29324 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63834014-63834105
64251 chr16 31235551 31235551 1 + G T LUSC 31235556 + 31235536 31235576 41 GCACCCGAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG GCACCCGAGCCTGGTTGTGTCTTCCTCTGGCCGCCGCGTGG < 41bp 1 0.270687278980698 1 0.08463454246521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235556 chr16:31235551 synonymous SNV . 0 16 hm5C_associated_SNPs_29325 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31235513-31235568
64251 chr12 104341167 104341167 1 + G C LUSC 104341157 + 104341137 104341177 41 ACAGAAGACACAGAGCAAGACGAAGATGAAGAAATGGATGT ACAGAAGACACAGAGCAAGACGAAGATGAACAAATGGATGT < 41bp 1 0.534116523058723 1 0.163905620574951 experiment 0.931766953882553 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104341157 chr12:104341167 nonsynonymous SNV 0.046 1 31 hm5C_associated_SNPs_29326 0 0 63 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:104341080-104341180
64251 chr15 64792172 64792172 1 + T G LUSC 64792174 + 64792154 64792194 41 CAGAAAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGA CAGAAAAGGATCCTGGGGGCCTCCAGCCAGTTCCCTTGGGA < 41bp 1 0.545843417721514 1 0.881388247013092 experiment 0.908313164556972 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64792174 chr15:64792172 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_29328 0 0 7 EIF3H POSTAR2 ENCODE chr15:64792152-64792314
64251 chr5 153760026 153760026 1 + G A LUSC 153760010 + 153759990 153760030 41 ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCGCAAG ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCACAAG < 41bp 1 0.177736261671748 1 0.175941705703735 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760010 chr5:153760026 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_29329 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chr5 153760026 153760026 1 + G A LUSC 153760024 + 153760004 153760044 41 TCAGACCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC TCAGACCGCATTGCTCGGAACCACAAGACCATTGTGTGCCC < 41bp 1 0.273217797313399 1 0.15230655670166 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760024 chr5:153760026 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_29330 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chr2 98263887 98263887 1 + G C LUSC 98263871 + 98263851 98263891 41 GGAAGACCCTAATTTAGTCCCCTCCATCTCCAACAAGAGAA GGAAGACCCTAATTTAGTCCCCTCCATCTCCAACAACAGAA < 41bp 1 0.0431111888068695 1 0.0965458154678345 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263871 chr2:98263887 nonsynonymous SNV 0.803 4 37 hm5C_associated_SNPs_29335 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:98263855-98263887
64251 chr2 98263887 98263887 1 + G C LUSC 98263872 + 98263852 98263892 41 GAAGACCCTAATTTAGTCCCCTCCATCTCCAACAAGAGAAT GAAGACCCTAATTTAGTCCCCTCCATCTCCAACAACAGAAT < 41bp 1 0.660740721559392 1 0.506196916103363 experiment 0.678518556881216 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263872 chr2:98263887 nonsynonymous SNV 0.803 4 36 hm5C_associated_SNPs_29336 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:98263855-98263887
64251 chr1 182827347 182827347 1 + G T LUSC 182827338 + 182827318 182827358 41 CCATCTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA CCATCTTGGAGTGGTTGAAGCTTACTCCGTACTTACAAAGA < 41bp 1 0.19021455425262 1 0.16669362783432 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827338 chr1:182827347 nonsynonymous SNV 0.981 4 30 hm5C_associated_SNPs_29337 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 182827347 182827347 1 + G T LUSC 182827342 + 182827322 182827362 41 CTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGAAGAA CTTGGAGTGGTTGAAGCTTACTCCGTACTTACAAAGAAGAA < 41bp 1 0.718696672645699 1 0.451028943061829 experiment 0.562606654708602 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827342 chr1:182827347 nonsynonymous SNV 0.981 4 26 hm5C_associated_SNPs_29338 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 182827347 182827347 1 + G T LUSC 182827349 + 182827329 182827369 41 TGGTTGAAGCTTACTCCGGACTTACAAAGAAGAAGGAAGGA TGGTTGAAGCTTACTCCGTACTTACAAAGAAGAAGGAAGGA < 41bp 1 0.0735578744600236 1 0.118629425764084 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827349 chr1:182827347 nonsynonymous SNV 0.981 4 19 hm5C_associated_SNPs_29339 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr15 29346586 29346586 1 + A G LUSC 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAACTGCCCGTTCCGGAGGATGAGCCCTCCGTCC < 41bp 1 0.73351222135025 1 0.887601971626282 experiment 0.532975557299499 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346586 nonsynonymous SNV 0.002 0 17 hm5C_associated_SNPs_29344 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr20 35857089 35857089 1 + A T LUSC 35857080 + 35857060 35857100 41 GATTGAATTTGACTCTGCCTCTGGCACCTACACTCTCTACT GATTGAATTTGACTCTGCCTCTGGCACCTTCACTCTCTACT < 41bp 1 0.408428720943085 1 0.58711564540863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35857080 chr20:35857089 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_29345 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:35856999-35857141
64251 chr1 54666042 54666042 1 + G T LUSC 54666050 + 54666030 54666070 41 GCGGAAGTCGGAGCCTCCTCCCCTGGATAGGGTGTACGAGA GCGGAAGTCGGATCCTCCTCCCCTGGATAGGGTGTACGAGA < 41bp 1 0.373027330389449 1 0.85488498210907 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54666050 chr1:54666042 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_29347 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:54666027-54666095
64251 chr7 45688315 45688315 1 + G A LUSC 45688321 + 45688301 45688341 41 GGACTGCTACTACTGCGTGTCGGGCCTCACCCAGCCCAAGA GGACTGCTACTACTACGTGTCGGGCCTCACCCAGCCCAAGA < 41bp 1 0.46334057415026 1 0.788561820983887 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45688321 chr7:45688315 nonsynonymous SNV 0.837 5 15 hm5C_associated_SNPs_29348 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:45688292-45688319
64251 chr19 39964942 39964942 1 + G T LUSC 39964940 + 39964920 39964960 41 GGTTCCTACCAGCCCAGCCCCAGCCCCCAGAGCTACCACCA GGTTCCTACCAGCCCAGCCCCATCCCCCAGAGCTACCACCA < 41bp 1 0.134661803806061 1 0.194240748882294 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964940 chr19:39964942 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_29350 0 0 5 IGF2BP2 POSTAR2 ENCODE chr19:39964872-39965007
64251 chr17 15907564 15907564 1 + C G LUSC 15907552 + 15907532 15907572 41 TGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGCAGA TGAAATTTCCCTAAAGCTGGCCAGTATCTATGGTGCGCAGA < 41bp 1 0.128770825298269 1 0.0839388370513916 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15907552 chr17:15907564 nonsynonymous SNV 0.999 2 33 hm5C_associated_SNPs_29351 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:15907526-15907572
64251 chr12 104378655 104378655 1 + C T LUSC 104378675 + 104378655 104378695 41 CGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC TGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCCC < 41bp 1 0.23656302403247 1 0.036694198846817 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TDG ENSG00000139372 CDS Human protein_coding chr12:104378675 chr12:104378655 synonymous SNV . 0 1 hm5C_associated_SNPs_29352 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104378650-104378669
64251 chr11 8016879 8016879 1 + G C LUSC 8016893 + 8016873 8016913 41 GTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAA GTTCCCCATGACTTTGAGACCATGCTCAACAGCAACATCAA < 41bp 1 0.165772812616252 1 0.211518108844757 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3F ENSG00000175390 CDS Human protein_coding chr11:8016893 chr11:8016879 nonsynonymous SNV 0.921 4 7 hm5C_associated_SNPs_29354 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:8016848-8016885
64251 chr14 97018866 97018866 1 + A C LUSC 97018858 + 97018838 97018878 41 TTGACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGA TTGACAGCTCTCAATGACAGCAGCCTCGCCTTGTCTATGGA < 41bp 1 0.2441048058274 1 0.100721091032028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97018858 chr14:97018866 nonsynonymous SNV 0.998 2 29 hm5C_associated_SNPs_29355 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:97018824-97018879
64251 chr5 68524045 68524045 1 + C A LUSC 68524030 + 68524010 68524050 41 TTTTTTTTTAATTTCAGTATCAGAAGCTTTGAGATCAGCAG TTTTTTTTTAATTTCAGTATCAGAAGCTTTGAGATAAGCAG < 41bp 1 0.753946562462758 1 0.524089276790619 experiment 0.492106875074484 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPS36 ENSG00000134056 CDS Human protein_coding chr5:68524030 chr5:68524045 stopgain 0.996 0 36 hm5C_associated_SNPs_29356 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:68524024-68524057
64251 chr2 74720131 74720131 1 + C T LUSC 74720147 + 74720127 74720167 41 CCCTCAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGC CCCTTAGGCCTACCTTCCCTCAGGTGCCCTCGAAGCACTGC < 41bp 1 0.771675479705598 1 0.837131023406982 experiment 0.456649040588804 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TTC31 ENSG00000115282 CDS Human protein_coding chr2:74720147 chr2:74720131 nonsynonymous SNV 0.019 1 5 hm5C_associated_SNPs_29357 0 0 2 NOL12 POSTAR2 ENCODE chr2:74720071-74720145
64251 chr17 76167718 76167718 1 + C T LUSC 76167712 + 76167692 76167732 41 GCAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGT GCAGCCATCACCTTCAGCTTCTTTTCTATCTTCTCCTGGGT < 41bp 1 0.0692420339943767 1 0.0213637948036194 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167712 chr17:76167718 synonymous SNV . 0 27 hm5C_associated_SNPs_29359 0 0 7 METAP2 POSTAR2 ENCODE chr17:76167717-76167730
64251 chr17 78079644 78079644 1 + G A LUSC 78079642 + 78079622 78079662 41 ACTCTACAGCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGA ACTCTACAGCGTGGAGTTCTCCAAGGAGCCCTTCGGGGTGA < 41bp 1 0.694855910018285 1 0.790667831897736 experiment 0.61028817996343 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GAA ENSG00000171298 CDS Human protein_coding chr17:78079642 chr17:78079644 nonsynonymous SNV 0.887 1 23 hm5C_associated_SNPs_29361 0 0 2 NOL12 POSTAR2 ENCODE chr17:78079631-78079690
64251 chr8 22473311 22473311 1 + A T LUSC 22473327 + 22473307 22473347 41 TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATC TCCCTGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATC < 41bp 1 0.256520288499426 1 0.393862426280975 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22473327 chr8:22473311 synonymous SNV . 0 5 hm5C_associated_SNPs_29362 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:22473293-22473312
64251 chr2 170471233 170471233 1 + A C LUSC 170471216 + 170471196 170471236 41 GGATACTCAGTTGTGGAGAGCTGATTCCCAAATCTAAAGGT GGATACTCAGTTGTGGAGAGCTGATTCCCAAATCTAACGGT < 41bp 1 0.382987943879068 1 0.124880731105804 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIG ENSG00000138398 CDS Human protein_coding chr2:170471216 chr2:170471233 nonsynonymous SNV 0.997 3 38 hm5C_associated_SNPs_29364 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:170471218-170471241
64251 chr19 10823291 10823291 1 + C T LUSC 10823292 + 10823272 10823312 41 ATGTTCGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCT ATGTTCGACTGCGTCTTCCTCACACGGACAGCGGTGAGGCT < 41bp 1 0.301784510056911 1 0.232902526855469 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823292 chr19:10823291 nonsynonymous SNV 0.913 3 20 hm5C_associated_SNPs_29365 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823272-10823303
64251 chr2 54858661 54858661 1 + G A LUSC 54858649 + 54858629 54858669 41 ACTGGATGGAACGAGCTCCACAAGATGTGGGAGAACAGACA ACTGGATGGAACGAGCTCCACAAGATGTGGGAAAACAGACA < 41bp 1 0.652574668522958 1 0.636572003364563 experiment 0.694850662954084 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858649 chr2:54858661 synonymous SNV . 0 33 hm5C_associated_SNPs_29366 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:54858632-54858667
64251 chr2 54858661 54858661 1 + G A LUSC 54858664 + 54858644 54858684 41 CTCCACAAGATGTGGGAGAACAGACAAAATCTCCTATCCCA CTCCACAAGATGTGGGAAAACAGACAAAATCTCCTATCCCA < 41bp 1 0.382028071836431 1 0.571363568305969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858664 chr2:54858661 synonymous SNV . 0 18 hm5C_associated_SNPs_29367 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:54858632-54858667
64251 chr5 154169899 154169899 1 + G A LUSC 154169887 + 154169867 154169907 41 CCCTTCTTGTTCCCACAGAACACTCTGCTCCAGCCAAGGTG CCCTTCTTGTTCCCACAGAACACTCTGCTCCAACCAAGGTG < 41bp 1 0.160417067271115 1 0.0468122065067291 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154169887 chr5:154169899 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_29368 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:154169880-154169900
64251 chr8 77619806 77619806 1 + C A LUSC 77619825 + 77619805 77619845 41 TCCGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC TACGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC < 41bp 1 0.181842166217076 1 0.500535845756531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77619825 chr8:77619806 synonymous SNV . 0 2 hm5C_associated_SNPs_29377 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:77619801-77619830
64251 chr2 27440793 27440793 1 + C T LUSC 27440789 + 27440769 27440809 41 ACCCCGAGGCCCTCACCGATCCCTCCTACAAGGCACAGATC ACCCCGAGGCCCTCACCGATCCCTTCTACAAGGCACAGATC < 41bp 1 0.0601781625925516 1 0.0549103617668152 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27440789 chr2:27440793 nonsynonymous SNV 0.984 5 25 hm5C_associated_SNPs_29378 0 0 2 GEMIN5 POSTAR2 ENCODE chr2:27440754-27440801
64251 chrX 73042695 73042695 1 - C T LUSC 73042691 - 73042671 73042711 41 TAGCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT TAGCTGTGATATGTTCAATACTAAGGAAAAACTAAACAGAT < 41bp 1 0.181750025073865 1 0.552383601665497 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042691 chrX:73042695 . . 0 17 hm5C_associated_SNPs_29380 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr8 99168342 99168342 1 + T A LUSC 99168348 + 99168328 99168368 41 CTTTCTGCTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAG CTTTCTGCTGTCCCAGGGAGCAGTTAACTCAAGACTGGGAG < 41bp 1 0.205571145846391 1 0.430422961711884 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POP1 ENSG00000104356 CDS Human protein_coding chr8:99168348 chr8:99168342 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_29381 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:99168337-99168360
64251 chrX 73045732 73045732 1 - A C LUSC 73045745 - 73045725 73045765 41 GAGAACCTGGGACTGTTGAGCATGTTTAATACTTTCCTTGA GAGAACCTGGGACTGTTGAGCATGTTTAATACTGTCCTTGA < 41bp 1 0.143826887793987 1 0.473824560642242 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045745 chrX:73045732 . . 0 34 hm5C_associated_SNPs_29382 0 0 69 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr20 30115371 30115371 1 + T A LUSC 30115370 + 30115350 30115390 41 AGCTGCACACTCTTGGGGCTCTACCTCTTTTTCAAAGTAAG AGCTGCACACTCTTGGGGCTCAACCTCTTTTTCAAAGTAAG < 41bp 1 0.100060388286922 1 0.142320781946182 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HM13 ENSG00000101294 CDS Human protein_coding chr20:30115370 chr20:30115371 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_29384 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:30115339-30115377
64251 chr10 121677437 121677437 1 + C T LUSC 121677432 + 121677412 121677452 41 CTAGATATTTTATTTTATAACAGCCCCACCTACTGTCAGAC CTAGATATTTTATTTTATAACAGCCTCACCTACTGTCAGAC < 41bp 1 0.282951475555658 1 0.121571063995361 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121677432 chr10:121677437 nonsynonymous SNV 0.992 4 26 hm5C_associated_SNPs_29385 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:121677415-121677446
64251 chr14 24617669 24617669 1 + G T LUSC 24617684 + 24617664 24617704 41 CTGGGGAGCCCAGCCTAACTCAAGTAAGTTTGAGGACCCCC CTGGGTAGCCCAGCCTAACTCAAGTAAGTTTGAGGACCCCC < 41bp 1 0.382619030048725 1 0.476999461650848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617684 chr14:24617669 stopgain 0.016 0 6 hm5C_associated_SNPs_29386 0 0 1 PRPF8 POSTAR2 ENCODE chr14:24617624-24617683
64251 chr6 30856996 30856996 1 + G T LUSC 30857005 + 30856985 30857025 41 GAGCAGTGACGGGGATGGGGCCTGGTGCCCCGCAGGGTCGG GAGCAGTGACGTGGATGGGGCCTGGTGCCCCGCAGGGTCGG < 41bp 1 0.25636101363635 1 0.217724978923798 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30857005 chr6:30856996 nonsynonymous SNV 0.996 4 12 hm5C_associated_SNPs_29387 0 0 2 PPIG POSTAR2 ENCODE chr6:30856990-30857105
64251 chr4 184182146 184182146 1 + G C LUSC 184182141 + 184182121 184182161 41 AGTCGGGGCTCTCTGAACACCTCCAGCAGAGGGTCACTCAA AGTCGGGGCTCTCTGAACACCTCCACCAGAGGGTCACTCAA < 41bp 1 0.776186633788096 1 0.98058295249939 experiment 0.447626732423808 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184182141 chr4:184182146 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_29388 0 0 3 BUD13 POSTAR2 ENCODE chr4:184182044-184182159
64251 chr5 128440953 128440953 1 + C G LUSC 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTAAAGGTCTTGGGAGCACGGTTGAAGAAATTGATTT < 41bp 1 0.651608802107684 1 0.480006754398346 experiment 0.696782395784633 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440953 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_29390 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:128440946-128440962
64251 chr12 56214138 56214138 1 + C G LUSC 56214120 + 56214100 56214140 41 CAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAG CAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCGAG < 41bp 1 0.66523396083598 1 0.218686074018478 experiment 0.669532078328041 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214120 chr12:56214138 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_29391 0 0 1 SND1 POSTAR2 ENCODE chr12:56214130-56214204
64251 chr12 56214138 56214138 1 + C G LUSC 56214123 + 56214103 56214143 41 CCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTC CCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCGAGTTC < 41bp 1 0.577577894422615 1 0.379956960678101 experiment 0.844844211154769 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214123 chr12:56214138 nonsynonymous SNV 0.997 1 36 hm5C_associated_SNPs_29392 0 0 1 SND1 POSTAR2 ENCODE chr12:56214130-56214204
64251 chr18 19209068 19209068 1 + G A LUSC 19209061 + 19209041 19209081 41 GAAGAGGAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGA GAAGAGGAAGAGGAAGAGGACGTGGCCATGGCAGAGGAAGA < 41bp 1 0.584758855772229 1 0.488729447126389 experiment 0.830482288455542 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209061 chr18:19209068 nonsynonymous SNV 0.998 4 28 hm5C_associated_SNPs_29393 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr18 19209068 19209068 1 + G A LUSC 19209067 + 19209047 19209087 41 GAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGGT GAAGAGGAAGAGGACGTGGCCATGGCAGAGGAAGAGGGGGT < 41bp 1 0.673725773370057 1 0.220461755990982 experiment 0.652548453259885 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209067 chr18:19209068 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_29394 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr6 26093173 26093173 1 + C T LUSC 26093171 + 26093151 26093191 41 GCACCCAGGCCTGGATCAGCCCCTCATTGTGATCTGGGGTA GCACCCAGGCCTGGATCAGCCCTTCATTGTGATCTGGGGTA < 41bp 1 0.0687659062218548 1 0.0623259544372559 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control HFE ENSG00000010704 CDS Human protein_coding chr6:26093171 chr6:26093173 nonsynonymous SNV 0.138 3 23 hm5C_associated_SNPs_29396 0 0 1 SND1 POSTAR2 ENCODE chr6:26093037-26093187
64251 chr7 73944165 73944165 1 + T C LUSC 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATCCCCCTCAAGCGCCCCTGCACTT < 41bp 1 0.071055791235889 1 0.197008967399597 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944165 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_29412 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr9 132863443 132863443 1 + A C LUSC 132863429 + 132863409 132863449 41 CACCATTGCACTCATTGGCACTGGCTGGGCTTTCATTAAGC CACCATTGCACTCATTGGCACTGGCTGGGCTTTCCTTAAGC < 41bp 1 0.235802269197172 1 0.738452732563019 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GPR107 ENSG00000148358 CDS Human protein_coding chr9:132863429 chr9:132863443 nonsynonymous SNV 0.998 2 35 hm5C_associated_SNPs_29413 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:132863426-132863447
64251 chr19 10748940 10748940 1 + G T LUSC 10748954 + 10748934 10748974 41 TATCAGGATCGTGCAGGATACAGCACCACCCCTCAATTATT TATCAGTATCGTGCAGGATACAGCACCACCCCTCAATTATT < 41bp 1 0.514341355688163 1 0.0883971452713013 experiment 0.971317288623673 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10748954 chr19:10748940 nonsynonymous SNV 0.961 1 7 hm5C_associated_SNPs_29415 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:10748940-10748960
64251 chr6 52943674 52943674 1 + G T LUSC 52943668 + 52943648 52943688 41 AGATTACTTATACCCGGTCTCCAGATGGTGATGGCGTTGGA AGATTACTTATACCCGGTCTCCAGATTGTGATGGCGTTGGA < 41bp 1 0.650996551379416 1 0.644495010375977 experiment 0.698006897241169 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52943668 chr6:52943674 nonsynonymous SNV 0.997 2 27 hm5C_associated_SNPs_29416 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:52943602-52943690
64251 chrX 131202531 131202531 1 + T C LUSC 131202534 + 131202514 131202554 41 ACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG ACACAGATTAAAAGAAACACCTTTGTGGGAACTCCATTTTG < 41bp 1 0.286779932879144 1 0.0427736937999725 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK26 ENSG00000134602 CDS Human protein_coding chrX:131202534 chrX:131202531 synonymous SNV . 0 18 hm5C_associated_SNPs_29417 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:131202519-131202555
64251 chr17 78201679 78201679 1 + G A LUSC 78201694 + 78201674 78201714 41 GATGCGGGACCACGTGCCTCCCGTCCACCCCGAGATGCCCC GATGCAGGACCACGTGCCTCCCGTCCACCCCGAGATGCCCC < 41bp 1 0.102511752206842 1 0.640882730484009 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201694 chr17:78201679 nonsynonymous SNV 0.707 1 6 hm5C_associated_SNPs_29419 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:78201659-78201684
64251 chr9 116971987 116971987 1 + G T LUSC 116971985 + 116971965 116972005 41 GGCTCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAA GGCTCCCAGGGCTCTTCGGCCTTCCAGGGTCTGATGGAGAA < 41bp 1 0.0362381600158954 1 0.0809206366539001 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971985 chr9:116971987 synonymous SNV . 0 23 hm5C_associated_SNPs_29428 0 0 7 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971987 116971987 1 + G T LUSC 116971988 + 116971968 116972008 41 TCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGA TCCCAGGGCTCTTCGGCCTTCCAGGGTCTGATGGAGAACGA < 41bp 1 0.209130080688305 1 0.885968863964081 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971988 chr9:116971987 synonymous SNV . 0 20 hm5C_associated_SNPs_29429 0 0 7 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr9 116971987 116971987 1 + G T LUSC 116971989 + 116971969 116972009 41 CCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGAG CCCAGGGCTCTTCGGCCTTCCAGGGTCTGATGGAGAACGAG < 41bp 1 0.367734494269889 1 0.884087204933167 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971989 chr9:116971987 synonymous SNV . 0 19 hm5C_associated_SNPs_29430 0 0 7 EFTUD2 POSTAR2 ENCODE chr9:116971969-116971996
64251 chr5 176721115 176721115 1 + A T LUSC 176721103 + 176721083 176721123 41 GCAATCAACAGGAATGGCTGCTCAGGCACCCAAAATGTCAG GCAATCAACAGGAATGGCTGCTCAGGCACCCATAATGTCAG < 41bp 1 0.199905787198926 1 0.0969629287719727 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721103 chr5:176721115 nonsynonymous SNV 0.890 1 33 hm5C_associated_SNPs_29435 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176721114-176721207
64251 chr10 13251236 13251236 1 + G T LUSC 13251239 + 13251219 13251259 41 TTTTCTAGGAAAAGACTGGTCCAAAGATAGGAGGAGAAACT TTTTCTAGGAAAAGACTTGTCCAAAGATAGGAGGAGAAACT < 41bp 1 0.540498955650562 1 0.128528892993927 experiment 0.919002088698877 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM10 ENSG00000065328 CDS Human protein_coding chr10:13251239 chr10:13251236 nonsynonymous SNV 0.952 4 18 hm5C_associated_SNPs_29436 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:13251218-13251256
64251 chr10 126505162 126505162 1 + C T LUSC 126505159 + 126505139 126505179 41 TTACAGAAATCCATAACCATCAGCCTTGTTCAAAACTTTTT TTACAGAAATCCATAACCATCAGTCTTGTTCAAAACTTTTT < 41bp 1 0.137854145802577 1 0.0580964684486389 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126505159 chr10:126505162 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_29437 0 0 1 PRPF8 POSTAR2 ENCODE chr10:126505161-126505220
64251 chr22 31998624 31998624 1 + A G LUSC 31998614 + 31998594 31998634 41 CCATCCTTCACGCAGAGCGACAGCTTCTGTATAGGTCTTGG CCATCCTTCACGCAGAGCGACAGCTTCTGTGTAGGTCTTGG < 41bp 1 0.160391131660082 1 0.123871803283691 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SFI1 ENSG00000198089 CDS Human protein_coding chr22:31998614 chr22:31998624 nonsynonymous SNV 0.133 0 31 hm5C_associated_SNPs_29438 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:31998623-31998661
64251 chr22 29533453 29533453 1 + C T LUSC 29533451 + 29533431 29533471 41 ACCATCCGGGTTCCGGGGGCCTCCCACATCCACTTCAGCTT ACCATCCGGGTTCCGGGGGCCTTCCACATCCACTTCAGCTT < 41bp 1 0.0758892904304877 1 0.0672135055065155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533451 chr22:29533453 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_29448 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:29533423-29533455
64251 chr1 151633325 151633325 1 + C T LUSC 151633305 + 151633285 151633325 41 CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATT < 41bp 1 0.286445400039929 1 0.15373107790947 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX27 ENSG00000143376 CDS Human protein_coding chr1:151633305 chr1:151633325 nonsynonymous SNV 0.723 1 41 hm5C_associated_SNPs_29449 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151633309-151633332
64251 chr17 37357553 37357553 1 + A G LUSC 37357571 + 37357551 37357591 41 GAAATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGT GAGATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGT < 41bp 1 0.139909914038959 1 0.057589590549469 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357571 chr17:37357553 synonymous SNV . 0 3 hm5C_associated_SNPs_29450 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37357505-37357567
64251 chr17 37357553 37357553 1 + A G LUSC 37357572 + 37357552 37357592 41 AAATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGTC AGATCGCCAATGCCAACTCCCGTGAGTACCTGGGATCTGTC < 41bp 1 0.705399123618328 1 0.387929826974869 experiment 0.589201752763344 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357572 chr17:37357553 synonymous SNV . 0 2 hm5C_associated_SNPs_29451 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37357505-37357567
64251 chr5 82868298 82868298 1 + G C LUSC 82868278 + 82868258 82868298 41 CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTC < 41bp 1 0.531742264023068 1 0.613778710365295 experiment 0.936515471953864 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868278 chr5:82868298 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_29453 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868274-82868316
64251 chr19 3525958 3525958 1 + A T LUSC 3525949 + 3525929 3525969 41 GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAG GGAGACCGCTTCATCCCCTCCAGAGCCGGTGCCAACTGGAG < 41bp 1 0.366440671082577 1 0.804131865501404 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3525949 chr19:3525958 synonymous SNV . 0 30 hm5C_associated_SNPs_29456 0 0 2 GRWD1 POSTAR2 ENCODE chr19:3525913-3525999
64251 chr7 87530089 87530089 1 + G A LUSC 87530094 + 87530074 87530114 41 ATCAGAATCCAAACAGATGGCGATAAGTATGGTGGAACCTC ATCAGAATCCAAACAAATGGCGATAAGTATGGTGGAACCTC < 41bp 1 0.494738905426011 1 0.180264264345169 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530094 chr7:87530089 nonsynonymous SNV 0.332 0 16 hm5C_associated_SNPs_29458 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:87530081-87530102
64251 chr5 52204822 52204822 1 + G A LUSC 52204817 + 52204797 52204837 41 CTAGTCGGAGCCCCTATGTACATGGGAACAGAGAAGGAGGA CTAGTCGGAGCCCCTATGTACATGGAAACAGAGAAGGAGGA < 41bp 1 0.289998877180393 1 0.248504221439362 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ITGA1 ENSG00000213949 CDS Human protein_coding chr5:52204817 chr5:52204822 nonsynonymous SNV 0.993 4 26 hm5C_associated_SNPs_29459 0 0 1 FASTKD2 POSTAR2 ENCODE chr5:52204787-52204872
64251 chr11 73941339 73941339 1 + A G LUSC 73941327 + 73941307 73941347 41 TTGAAGCCATGTATGGGGACCTTCCTCCTCCAATTATGCTG TTGAAGCCATGTATGGGGACCTTCCTCCTCCAGTTATGCTG < 41bp 1 0.0722943176578711 1 0.0211982429027557 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PPME1 ENSG00000214517 CDS Human protein_coding chr11:73941327 chr11:73941339 nonsynonymous SNV 0.999 0 33 hm5C_associated_SNPs_29460 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:73941326-73941356
64251 chr11 120352085 120352085 1 + C G LUSC 120352068 + 120352048 120352088 41 GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCCACC GCAGCCCATGACAGGCATCCCTGCTGTGGAATCCACCGACC < 41bp 1 0.608255308816117 1 0.232279926538467 experiment 0.783489382367766 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120352068 chr11:120352085 nonsynonymous SNV 0.197 0 38 hm5C_associated_SNPs_29466 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr11:120352031-120352085
64251 chr17 21731300 21731300 1 + G T LUSC 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCATCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.150661549717835 1 0.0982398092746735 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731300 nonsynonymous SNV 0.992 0 4 hm5C_associated_SNPs_29467 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr8 37968287 37968287 1 + C T LUSC 37968305 + 37968285 37968325 41 GGCCAACCTGACATGGCAGTCCCGAACACAGGATGAACATC GGTCAACCTGACATGGCAGTCCCGAACACAGGATGAACATC < 41bp 1 0.632084207004651 1 0.281623363494873 experiment 0.735831585990699 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASH2L ENSG00000129691 CDS Human protein_coding chr8:37968305 chr8:37968287 nonsynonymous SNV 0.899 4 3 hm5C_associated_SNPs_29468 0 0 4 FXR2 POSTAR2 ENCODE chr8:37968277-37968340
64251 chrX 73042638 73042638 1 - C A LUSC 73042631 - 73042611 73042651 41 AGAGTGGGAATAAGAGAGGGCTTTTTATTTTTTCGTTCATA AGAGTGGGAATAATAGAGGGCTTTTTATTTTTTCGTTCATA < 41bp 1 0.00887564895169631 1 0.0164662599563599 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042631 chrX:73042638 . . 0 14 hm5C_associated_SNPs_29469 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr1 65895721 65895721 1 + G A LUSC 65895720 + 65895700 65895740 41 GATTTCCTGTTATTCTTGCTCGTGTGGCTGTGGTAAGTTTT GATTTCCTGTTATTCTTGCTCATGTGGCTGTGGTAAGTTTT < 41bp 1 0.172068216204263 1 0.123861581087112 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LEPROT ENSG00000213625 CDS Human protein_coding chr1:65895720 chr1:65895721 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_29470 0 0 1 SND1 POSTAR2 ENCODE chr1:65895670-65895732
64251 chr17 33953852 33953852 1 + T C LUSC 33953838 + 33953818 33953858 41 CAGTATGTCGCCCTGAGGAACATCAACTTAATTGTCCAGAA CAGTATGTCGCCCTGAGGAACATCAACTTAATTGCCCAGAA < 41bp 1 0.384970197021493 1 0.158101469278336 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:33953838 chr17:33953852 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_29471 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:33953821-33953854
64251 chr17 80426666 80426666 1 + G A LUSC 80426677 + 80426657 80426697 41 GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC GCACAAAGTACTGGTAGTGTCTGTGTGTCCTCAATCTTTGC < 41bp 1 0.489303822978705 1 0.553278386592865 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NARF ENSG00000141562 CDS Human protein_coding chr17:80426677 chr17:80426666 synonymous SNV . 0 10 hm5C_associated_SNPs_29472 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80426641-80426696
64251 chr19 10657572 10657572 1 + C T LUSC 10657575 + 10657555 10657595 41 GCTGTCAGGGTCAGCCTCTCCCAGCCGGTACCATGGGCCTG GCTGTCAGGGTCAGCCTTTCCCAGCCGGTACCATGGGCCTG < 41bp 1 0.51637379835187 1 0.439201891422272 experiment 0.967252403296261 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4D ENSG00000130734 CDS Human protein_coding chr19:10657575 chr19:10657572 nonsynonymous SNV 0.155 3 18 hm5C_associated_SNPs_29473 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:10657568-10657581
64251 chr1 109801659 109801659 1 + C T LUSC 109801667 + 109801647 109801687 41 CGCTGCCGCAGCCGCGAGGGCGGCTACACCTGCCTCTGTCG CGCTGCCGCAGCTGCGAGGGCGGCTACACCTGCCTCTGTCG < 41bp 1 0.283798995760737 1 0.751847982406616 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801667 chr1:109801659 nonsynonymous SNV 0.998 2 13 hm5C_associated_SNPs_29474 0 0 1 FMR1 POSTAR2 ENCODE chr1:109801618-109801664
64251 chr22 30038233 30038233 1 + G A LUSC 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTAAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG < 41bp 1 0.670010011061698 1 0.401522934436798 experiment 0.659979977876604 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038233 nonsynonymous SNV 0.996 5 6 hm5C_associated_SNPs_29475 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:30038188-30038240
64251 chr14 102797996 102797996 1 + C T LUSC 102798016 + 102797996 102798036 41 CTGAACCAGAAAATGGAGCTCTTTTGCGATCAGAGAGATAC TTGAACCAGAAAATGGAGCTCTTTTGCGATCAGAGAGATAC < 41bp 1 0.0486725673012092 1 0.0455986857414246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102798016 chr14:102797996 nonsynonymous SNV 0.303 2 1 hm5C_associated_SNPs_29476 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:102797940-102798068
64251 chr14 102499721 102499721 1 + G T LUSC 102499701 + 102499681 102499721 41 GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATCCG GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATCCT < 41bp 1 0.278634142344662 1 0.726874113082886 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499701 chr14:102499721 nonsynonymous SNV 0.987 1 41 hm5C_associated_SNPs_29477 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 102499721 102499721 1 + G T LUSC 102499719 + 102499699 102499739 41 AACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCAT AACGAGGTGGAGCAGATGATCCTAGACCTGGAAGCCAGCAT < 41bp 1 0.0641644043136436 1 0.384467929601669 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499719 chr14:102499721 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_29478 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 102499721 102499721 1 + G T LUSC 102499720 + 102499700 102499740 41 ACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCATC ACGAGGTGGAGCAGATGATCCTAGACCTGGAAGCCAGCATC < 41bp 1 0.476984593319792 1 0.593962073326111 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499720 chr14:102499721 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_29479 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr2 11300664 11300664 1 + C T LUSC 11300656 + 11300636 11300676 41 CGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT CGCTGACCTACCTGGAGTACCCCATCCTTATCGCGCAAGGT < 41bp 1 0.183425425158263 1 0.31443452835083 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300656 chr2:11300664 synonymous SNV . 0 29 hm5C_associated_SNPs_29483 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:11300640-11300670
64251 chr17 48434128 48434128 1 + T G LUSC 48434109 + 48434089 48434129 41 ACCATGCCGCCACTGCTGCACCCCCAATGGGCACCCCACTC ACCATGCCGCCACTGCTGCACCCCCAATGGGCACCCCACGC < 41bp 1 0.142771243354491 1 0.0547497272491455 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48434109 chr17:48434128 nonsynonymous SNV 0.857 0 40 hm5C_associated_SNPs_29484 0 0 1 PRPF8 POSTAR2 ENCODE chr17:48434127-48434184
64251 chr2 32897410 32897410 1 + G C LUSC 32897396 + 32897376 32897416 41 TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCCGATCTG < 41bp 1 0.208142368362903 1 0.241556257009506 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32897396 chr2:32897410 synonymous SNV . 0 35 hm5C_associated_SNPs_29485 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32897348-32897444
64251 chr11 65386185 65386185 1 + C T LUSC 65386204 + 65386184 65386224 41 TCCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG TTCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG < 41bp 1 0.231596074166622 1 0.396103024482727 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386204 chr11:65386185 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_29486 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65386130-65386198
64251 chr1 47838719 47838719 1 + C G LUSC 47838724 + 47838704 47838744 41 CCTTCAAGGATGGAACAAGACCATGGATGGGAAGGCAGATG CCTTCAAGGATGGAAGAAGACCATGGATGGGAAGGCAGATG < 41bp 1 0.461552895079547 1 0.0771947503089905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838724 chr1:47838719 nonsynonymous SNV 0.996 1 16 hm5C_associated_SNPs_29487 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:47838666-47838734
64251 chr10 5494346 5494346 1 + G C LUSC 5494328 + 5494308 5494348 41 TTTCTTTTTTAAGTCATTTACCCTTCGTGGTGACCACAGAT TTTCTTTTTTAAGTCATTTACCCTTCGTGGTGACCACACAT < 41bp 1 0.0883154325192702 1 0.0573877096176147 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NET1 ENSG00000173848 CDS Human protein_coding chr10:5494328 chr10:5494346 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_29488 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:5494320-5494346
64251 chr22 38201952 38201952 1 + C T LUSC 38201937 + 38201917 38201957 41 GGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCA GGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCTAACCA < 41bp 1 0.378825316887174 1 0.181041389703751 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201937 chr22:38201952 nonsynonymous SNV 0.925 1 36 hm5C_associated_SNPs_29489 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38201939-38201983
64251 chr5 118529647 118529647 1 + C G LUSC 118529637 + 118529617 118529657 41 TAGCATCAGATTTCCATCTCCAGGAACATTCTAATTCAAAT TAGCATCAGATTTCCATCTCCAGGAACATTGTAATTCAAAT < 41bp 1 0.263935381993033 1 0.878318846225739 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118529637 chr5:118529647 nonsynonymous SNV 0.995 3 31 hm5C_associated_SNPs_29491 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:118529640-118529665
64251 chr16 30773931 30773931 1 + T C LUSC 30773915 + 30773895 30773935 41 CCGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGT CCGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCCGAGT < 41bp 1 0.12761057684388 1 0.282474994659424 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773915 chr16:30773931 nonsynonymous SNV 0.996 0 37 hm5C_associated_SNPs_29492 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30773912-30773941
64251 chr16 30773931 30773931 1 + T C LUSC 30773916 + 30773896 30773936 41 CGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTC CGGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCCGAGTC < 41bp 1 0.402872423199837 1 0.45452493429184 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773916 chr16:30773931 nonsynonymous SNV 0.996 0 36 hm5C_associated_SNPs_29493 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30773912-30773941
64251 chr16 30773931 30773931 1 + T C LUSC 30773917 + 30773897 30773937 41 GGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCG GGCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCCGAGTCG < 41bp 1 0.579410029859442 1 0.688372492790222 experiment 0.841179940281116 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773917 chr16:30773931 nonsynonymous SNV 0.996 0 35 hm5C_associated_SNPs_29494 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30773912-30773941
64251 chr16 30773931 30773931 1 + T C LUSC 30773918 + 30773898 30773938 41 GCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCTGAGTCGT GCGACGGGGGCTCAGGGCCCCCGGAAAAGAAGCCGAGTCGT < 41bp 1 0.669617580426288 1 0.575144231319427 experiment 0.660764839147424 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30773918 chr16:30773931 nonsynonymous SNV 0.996 0 34 hm5C_associated_SNPs_29495 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30773912-30773941
64251 chr11 73638345 73638345 1 + A C LUSC 73638335 + 73638315 73638355 41 ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCTA ATTCTTGTGTTTTAGGTAGCCACATGGGAGCAGCAGATCTA < 41bp 1 0.60622309279437 1 0.828021645545959 experiment 0.78755381441126 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73638335 chr11:73638345 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_29496 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73638338-73638376
64251 chr1 237044071 237044071 1 + A C LUSC 237044057 + 237044037 237044077 41 TCTGACCCTTCTTTTTAGAACCCACACAGCAGTTAAAATAG TCTGACCCTTCTTTTTAGAACCCACACAGCAGTTCAAATAG < 41bp 1 0.0353023449400283 1 0.0942713022232056 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTR ENSG00000116984 CDS Human protein_coding chr1:237044057 chr1:237044071 nonsynonymous SNV 0.998 4 35 hm5C_associated_SNPs_29498 0 0 1 DDX24 POSTAR2 ENCODE chr1:237044052-237044084
64251 chr19 39215195 39215195 1 + C A LUSC 39215182 + 39215162 39215202 41 GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATG GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGAACAAGATG < 41bp 1 0.0888925041976835 1 0.021841287612915 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215182 chr19:39215195 nonsynonymous SNV 0.998 0 34 hm5C_associated_SNPs_29499 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215195 39215195 1 + C A LUSC 39215184 + 39215164 39215204 41 CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGA CAGGCCAATGTTGTGGGGCCCTGGATCCAGAACAAGATGGA < 41bp 1 0.714140740650448 1 0.536302506923676 experiment 0.571718518699104 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215184 chr19:39215195 nonsynonymous SNV 0.998 0 32 hm5C_associated_SNPs_29500 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215195 39215195 1 + C A LUSC 39215191 + 39215171 39215211 41 ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG ATGTTGTGGGGCCCTGGATCCAGAACAAGATGGAGGTGAGG < 41bp 1 0.610170207422138 1 0.701059281826019 experiment 0.779659585155724 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215191 chr19:39215195 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_29501 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr10 17271421 17271421 1 + C A LUSC 17271407 + 17271387 17271427 41 CGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCCATGTCC CGCCGCCGCCCAGGCCATCGCCACCCTCCGCAGCAATGTCC < 41bp 1 0.493329107942426 1 0.0856778919696808 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VIM-AS1 ENSG00000229124 ncRNA_exonic Human antisense chr10:17271407 chr10:17271421 . . 0 35 hm5C_associated_SNPs_29502 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:17271340-17271460
64251 chr16 67914783 67914783 1 + C G LUSC 67914803 + 67914783 67914823 41 CCCCTCCCTCCTGGAGGCAGCCTTGACCCAGGAGGCCTCGA GCCCTCCCTCCTGGAGGCAGCCTTGACCCAGGAGGCCTCGA < 41bp 1 0.0486473342321206 1 0.125474870204926 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914803 chr16:67914783 synonymous SNV . 0 1 hm5C_associated_SNPs_29503 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr16:67914774-67914795
64251 chr20 37570718 37570718 1 + T C LUSC 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCCCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC < 41bp 1 0.41238750938188 1 0.0542148947715759 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570718 synonymous SNV . 0 3 hm5C_associated_SNPs_29504 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr20:37570686-37570726
64251 chr1 218458662 218458662 1 + G C LUSC 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGCCAGCCGCCGCTCCGGACTCACGTG < 41bp 1 0.322557558044973 1 0.295867025852203 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458662 nonsynonymous SNV 0.039 1 17 hm5C_associated_SNPs_29505 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr11 67354004 67354004 1 + C G LUSC 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTCAAGGCCTTCCTGGCCTCCGCTGAGTACGTGAACC < 41bp 1 0.0273320024813381 1 0.2029729783535 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67354004 nonsynonymous SNV 0.974 0 26 hm5C_associated_SNPs_29506 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 67354004 67354004 1 + C G LUSC 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTCAAGGCCTTCCTGGCCTCCGCTGAGTACGTGAACCT < 41bp 1 0.478261080699224 1 0.733335375785828 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67354004 nonsynonymous SNV 0.974 0 25 hm5C_associated_SNPs_29507 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr2 32656058 32656058 1 + C T LUSC 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTTAACAAGAACAGCAGCAAAGGAGGCATCCTCAA < 41bp 1 0.301427826803802 1 0.152265131473541 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656058 stopgain 0.998 1 9 hm5C_associated_SNPs_29520 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr2 32656071 32656071 1 + A C LUSC 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTCAACAAGAACAGCCGCAAAGGAGGCATCCTCAA < 41bp 1 0.147737480998986 1 0.0655243694782257 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656071 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_29521 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr17 26685959 26685959 1 + G A LUSC 26685943 + 26685923 26685963 41 AACCTTTTCTTCTCAGATTCCAAACTATACCTCCATGAGCT AACCTTTTCTTCTCAGATTCCAAACTATACCTCCATAAGCT < 41bp 1 0.108976790913818 1 0.115797102451324 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM199 ENSG00000244045 CDS Human protein_coding chr17:26685943 chr17:26685959 nonsynonymous SNV 0.991 3 37 hm5C_associated_SNPs_29522 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr17:26685938-26685959
64251 chr19 11105646 11105646 1 + G C LUSC 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCCG < 41bp 1 0.643163187323227 1 0.701238751411438 experiment 0.713673625353547 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105646 nonsynonymous SNV 0.010 4 40 hm5C_associated_SNPs_29528 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:11105641-11105673
64251 chr19 58906108 58906108 1 + C G LUSC 58906094 + 58906074 58906114 41 AGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGC AGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCGAACCGC < 41bp 1 0.655669862638692 1 0.302331566810608 experiment 0.688660274722615 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906094 chr19:58906108 synonymous SNV . 0 35 hm5C_associated_SNPs_29529 0 0 50 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906108 58906108 1 + C G LUSC 58906102 + 58906082 58906122 41 GACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTC GACGAGCTGGAGCGTGTGGCCAAGTCGAACCGCTGATTTTC < 41bp 1 0.672004706194465 1 0.623730719089508 experiment 0.655990587611071 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906102 chr19:58906108 synonymous SNV . 0 27 hm5C_associated_SNPs_29530 0 0 50 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906108 58906108 1 + C G LUSC 58906107 + 58906087 58906127 41 GCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTCCCAGC GCTGGAGCGTGTGGCCAAGTCGAACCGCTGATTTTCCCAGC < 41bp 1 0.639144196515235 1 0.576882243156433 experiment 0.721711606969529 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906107 chr19:58906108 synonymous SNV . 0 22 hm5C_associated_SNPs_29531 0 0 50 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 10794147 10794147 1 + C T LUSC 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCCCTGACACCCCTTTCGCCCTTG < 41bp 1 0.451699805133494 1 0.153491526842117 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794147 nonsynonymous SNV 0.224 1 32 hm5C_associated_SNPs_29532 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr19 10794147 10794147 1 + C T LUSC 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCCCTGACACCCCTTTCGCCCTTGATGCCA < 41bp 1 0.256798637313306 1 0.0395611226558685 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794147 nonsynonymous SNV 0.224 1 26 hm5C_associated_SNPs_29533 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr5 7889305 7889305 1 + G T LUSC 7889293 + 7889273 7889313 41 GTGCAGTAAACAAGGGGCAGCCGATTATAGCCGCTTTGTAC GTGCAGTAAACAAGGGGCAGCCGATTATAGCCTCTTTGTAC < 41bp 1 0.209518129954156 1 0.0996688306331635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7889293 chr5:7889305 nonsynonymous SNV 0.029 0 33 hm5C_associated_SNPs_29535 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:7889298-7889340
64251 chr16 2806571 2806571 1 + G A LUSC 2806567 + 2806547 2806587 41 AGCGCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAG AGCGCAAGCGGCGCGTCGAGCTGCAATGCCTCGAGCTGGAG < 41bp 1 0.751518570542605 1 0.31623911857605 experiment 0.49696285891479 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806567 chr16:2806571 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_29537 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr16 2806571 2806571 1 + G A LUSC 2806570 + 2806550 2806590 41 GCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAGGAG GCAAGCGGCGCGTCGAGCTGCAATGCCTCGAGCTGGAGGAG < 41bp 1 0.177970282143934 1 0.157950729131699 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806570 chr16:2806571 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_29538 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr16 2806571 2806571 1 + G A LUSC 2806576 + 2806556 2806596 41 GGCGCGTCGAGCTGCGATGCCTCGAGCTGGAGGAGATGATG GGCGCGTCGAGCTGCAATGCCTCGAGCTGGAGGAGATGATG < 41bp 1 0.782715967556129 1 0.858043909072876 experiment 0.434568064887742 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806576 chr16:2806571 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_29539 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr16 2806571 2806571 1 + G A LUSC 2806582 + 2806562 2806602 41 TCGAGCTGCGATGCCTCGAGCTGGAGGAGATGATGGAAGAG TCGAGCTGCAATGCCTCGAGCTGGAGGAGATGATGGAAGAG < 41bp 1 0.752243679820971 1 0.461572617292404 experiment 0.495512640358057 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806582 chr16:2806571 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_29540 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr20 31021637 31021637 1 + C T LUSC 31021621 + 31021601 31021641 41 TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTTAGTC < 41bp 1 0.131471594382374 1 0.200576514005661 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021621 chr20:31021637 stopgain 1.000 1 37 hm5C_associated_SNPs_29541 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:31021611-31021648
64251 chr1 39851507 39851507 1 + C G LUSC 39851491 + 39851471 39851511 41 CGAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTCTCAG CGAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTGTCAG < 41bp 1 0.162496953289647 1 0.382231920957565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851491 chr1:39851507 synonymous SNV . 0 37 hm5C_associated_SNPs_29542 0 0 1 FXR2 POSTAR2 ENCODE chr1:39851462-39851518
64251 chr10 104140382 104140382 1 + A G LUSC 104140373 + 104140353 104140393 41 CCCTCGGCCCTCTGGGAGATCACCTGGGAACGCATTGACTG CCCTCGGCCCTCTGGGAGATCACCTGGGAGCGCATTGACTG < 41bp 1 0.44672347134853 1 0.0708232223987579 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104140373 chr10:104140382 synonymous SNV . 0 30 hm5C_associated_SNPs_29544 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:104140371-104140428
64251 chr5 70818775 70818775 1 + A T LUSC 70818769 + 70818749 70818789 41 AAGAGCAATATCTCAATAAACTAACAAGGTAACATTTTATT AAGAGCAATATCTCAATAAACTAACATGGTAACATTTTATT < 41bp 1 0.104214515246169 1 0.0773312747478485 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BDP1 ENSG00000145734 CDS Human protein_coding chr5:70818769 chr5:70818775 nonsynonymous SNV 0.627 3 27 hm5C_associated_SNPs_29547 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:70818753-70818776
64251 chr22 36661498 36661498 1 + G T LUSC 36661494 + 36661474 36661514 41 CCCTTCACAGAGGGAGGCAGCCTTGTACTCTTGGAACCTGG CCCTTCACAGAGGGAGGCAGCCTTTTACTCTTGGAACCTGG < 41bp 1 0.0639404128560798 1 0.0284768044948578 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient APOL1 ENSG00000100342 CDS Human protein_coding chr22:36661494 chr22:36661498 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_29549 0 0 8 NOL12 POSTAR2 ENCODE chr22:36661452-36661509
64251 chr16 67914814 67914814 1 + G A LUSC 67914803 + 67914783 67914823 41 CCCCTCCCTCCTGGAGGCAGCCTTGACCCAGGAGGCCTCGA CCCCTCCCTCCTGGAGGCAGCCTTGACCCAGAAGGCCTCGA < 41bp 1 0.0404748635442943 1 0.116934031248093 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914803 chr16:67914814 nonsynonymous SNV 0.808 2 32 hm5C_associated_SNPs_29550 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:67914800-67914820
64251 chr14 97002284 97002284 1 + G T LUSC 97002283 + 97002263 97002303 41 ATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAA ATACCCACAACAGAACTCCACTTACAATGTGTCCGTTTCAA < 41bp 1 0.0761955353660848 1 0.0288387835025787 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97002283 chr14:97002284 synonymous SNV . 0 22 hm5C_associated_SNPs_29571 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:97002244-97002352
64251 chr7 44836390 44836390 1 + G C LUSC 44836378 + 44836358 44836398 41 TCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTGAGGTCGGG TCGACGGCGAGCCCTTGGGCCGCGTCTCCTTTCAGGTCGGG < 41bp 1 0.597330269853016 1 0.202985972166061 experiment 0.805339460293969 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPIA ENSG00000196262 CDS Human protein_coding chr7:44836378 chr7:44836390 nonsynonymous SNV 0.965 1 33 hm5C_associated_SNPs_29572 0 0 15 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr7:44836377-44836398
64251 chr20 5163061 5163061 1 + C T LUSC 5163068 + 5163048 5163088 41 TACTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTCTAC TACTGAGTCTGGTTAAGAAGCATTATCGACTGCAGTTCTAC < 41bp 1 0.176488383913891 1 0.0352522730827332 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDS2 ENSG00000101290 CDS Human protein_coding chr20:5163068 chr20:5163061 synonymous SNV . 0 14 hm5C_associated_SNPs_29573 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr20:5163033-5163075
64251 chr20 47896871 47896871 1 + G A LUSC 47896873 + 47896853 47896893 41 CCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAG CCTGCTGGCATATATGATAACTTAGCTTTTTTCCCCGACAG < 41bp 1 0.191162886396374 1 0.0591482520103455 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896873 chr20:47896871 . . 0 19 hm5C_associated_SNPs_29574 0 0 125 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896871 47896871 1 + G A LUSC 47896878 + 47896858 47896898 41 TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGA TGGCATATATGATAACTTAGCTTTTTTCCCCGACAGATCGA < 41bp 1 0.0505736390366663 1 0.136015772819519 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896878 chr20:47896871 . . 0 14 hm5C_associated_SNPs_29575 0 0 125 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896871 47896871 1 + G A LUSC 47896885 + 47896865 47896905 41 TATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTT TATGATAACTTAGCTTTTTTCCCCGACAGATCGACTATGTT < 41bp 1 0.183039975445097 1 0.0618172883987427 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896885 chr20:47896871 . . 0 7 hm5C_associated_SNPs_29576 0 0 125 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896871 47896871 1 + G A LUSC 47896886 + 47896866 47896906 41 ATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG ATGATAACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG < 41bp 1 0.457672725494734 1 0.12318366765976 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896886 chr20:47896871 . . 0 6 hm5C_associated_SNPs_29577 0 0 125 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr20 47896871 47896871 1 + G A LUSC 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATAACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA < 41bp 1 0.0572422971344987 1 0.0715912878513336 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896871 . . 0 5 hm5C_associated_SNPs_29578 0 0 125 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47896840-47896880
64251 chr17 38416815 38416815 1 + G A LUSC 38416799 + 38416779 38416819 41 TCCTCCAGGCAAACACAGAGCAGCCCAAGCTGAGTAGAGAT TCCTCCAGGCAAACACAGAGCAGCCCAAGCTGAGTAAAGAT < 41bp 1 0.19874453398372 1 0.227862775325775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38416799 chr17:38416815 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_29579 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38416793-38416818
64251 chr11 65273295 65273295 1 + A G LUSC 65273280 + 65273260 65273300 41 GTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACA GTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAGTAACA < 41bp 1 0.518909219423036 1 0.158738791942596 experiment 0.962181561153927 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273280 chr11:65273295 . . 0 36 hm5C_associated_SNPs_29582 0 0 84 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chrX 47424408 47424408 1 + G T LUSC 47424395 + 47424375 47424415 41 TGGCATCAGGTACGGAAGACCTTCTTCAGCCTGGCGTTCTG TGGCATCAGGTACGGAAGACCTTCTTCAGCCTGTCGTTCTG < 41bp 1 0.31014858940381 1 0.338581085205078 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 CDS Human protein_coding chrX:47424395 chrX:47424408 nonsynonymous SNV 0.995 2 34 hm5C_associated_SNPs_29583 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chrX:47424384-47424415
64251 chr1 110210760 110210760 1 + G A LUSC 110210743 + 110210723 110210763 41 ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTGGAA ACAGCAACCAGCACCATGCCCATGACACTGGGGTACTAGAA < 41bp 1 0.640553731489837 1 0.138470262289047 experiment 0.718892537020326 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSTM2 ENSG00000213366 CDS Human protein_coding chr1:110210743 chr1:110210760 stopgain 0.100 0 38 hm5C_associated_SNPs_29585 0 0 2 DDX3X POSTAR2 ENCODE chr1:110210694-110210774
64251 chr10 75519898 75519898 1 + C A LUSC 75519908 + 75519888 75519928 41 GATCCAGACTCCCCAGCGATCTGCCCCATCACAGGCCTCCA GATCCAGACTACCCAGCGATCTGCCCCATCACAGGCCTCCA < 41bp 1 0.437209074566109 1 0.542560458183289 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519908 chr10:75519898 nonsynonymous SNV 0.983 1 11 hm5C_associated_SNPs_29587 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75519880-75519905
64251 chr1 878367 878367 1 + G A LUSC 878356 + 878336 878376 41 CAAGCTCCAGCTGGAGGGGCCGGCGCCGAGGGGAAGGGGCT CAAGCTCCAGCTGGAGGGGCCGGCGCCGAGGAGAAGGGGCT < 41bp 1 0.588491961657634 1 0.641819953918457 experiment 0.823016076684732 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SAMD11 ENSG00000187634 CDS Human protein_coding chr1:878356 chr1:878367 nonsynonymous SNV 0.882 1 32 hm5C_associated_SNPs_29591 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:878360-878380
64251 chr12 123102894 123102894 1 + C T LUSC 123102893 + 123102873 123102913 41 TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAAGCGTGG TGGACTTGTTTTCACAGGTTCTCTACTTCAGCAAAGCGTGG < 41bp 1 0.162324347925938 1 0.24571904540062 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123102893 chr12:123102894 nonsynonymous SNV 0.886 4 22 hm5C_associated_SNPs_29593 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:123102870-123102896
64251 chr1 113238131 113238131 1 + C T LUSC 113238138 + 113238118 113238158 41 CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC CCGGGTCCACCTTTCTAGCTCCATCTACCGCCTCCTGGCCC < 41bp 1 0.0512943883310397 1 0.0568924248218536 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238138 chr1:113238131 nonsynonymous SNV 0.996 1 14 hm5C_associated_SNPs_29595 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr1 113238131 113238131 1 + C T LUSC 113238149 + 113238129 113238169 41 TTCCTAGCTCCATCTACCGCCTCCTGGCCCCCAGCAGGGAC TTTCTAGCTCCATCTACCGCCTCCTGGCCCCCAGCAGGGAC < 41bp 1 0.327410225945377 1 0.271610587835312 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238149 chr1:113238131 nonsynonymous SNV 0.996 1 3 hm5C_associated_SNPs_29596 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr6 36566717 36566717 1 + C T LUSC 36566703 + 36566683 36566723 41 AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCTCTCGAG < 41bp 1 0.741968370098524 1 0.375621438026428 experiment 0.516063259802953 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566703 chr6:36566717 nonsynonymous SNV 0.995 3 35 hm5C_associated_SNPs_29597 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:36566620-36566740
64251 chrX 64956717 64956717 1 + T A LUSC 64956736 + 64956716 64956756 41 TTGAACGGGAGAAGGAGGAGCTGATGGAGAGGCTGAAGCAG TAGAACGGGAGAAGGAGGAGCTGATGGAGAGGCTGAAGCAG < 41bp 1 0.339510638583975 1 0.319688260555267 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956736 chrX:64956717 synonymous SNV . 0 2 hm5C_associated_SNPs_29605 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:64956716-64956717
64251 chr17 29857360 29857360 1 + G T LUSC 29857365 + 29857345 29857385 41 AGAATTATAAGCTGCGGGATCAGAACGACGACTTGAATGGG AGAATTATAAGCTGCTGGATCAGAACGACGACTTGAATGGG < 41bp 1 0.363504170548401 1 0.613048017024994 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB11FIP4 ENSG00000131242 CDS Human protein_coding chr17:29857365 chr17:29857360 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_29606 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr17:29857346-29857381
64251 chr11 6629297 6629297 1 + C G LUSC 6629293 + 6629273 6629313 41 AAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC AAGGGACGATCATGGCTTCTCCCCGTTGCACTGGGCCTGCC < 41bp 1 0.553150580240017 1 0.383931756019592 experiment 0.893698839519966 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629293 chr11:6629297 synonymous SNV . 0 25 hm5C_associated_SNPs_29608 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr11 6629297 6629297 1 + C G LUSC 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGACGATCATGGCTTCTCCCCGTTGCACTGGGCCTGCCG < 41bp 1 0.343220885566979 1 0.121320724487305 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629297 synonymous SNV . 0 24 hm5C_associated_SNPs_29609 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr16 28847784 28847784 1 + G T LUSC 28847774 + 28847754 28847794 41 CCCACTGCCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCT CCCACTGCCTCCCCAGCTCTCAGTGACCCCTACTGTCTCCT < 41bp 1 0.576624949944871 1 0.743937075138092 experiment 0.846750100110257 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847774 chr16:28847784 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_29610 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chr10 6265947 6265947 1 + C T LUSC 6265930 + 6265910 6265950 41 TTCAATTTCAGAGGAGATGCCCTACCTGAAATGCCCTCTTC TTCAATTTCAGAGGAGATGCCCTACCTGAAATGCCCTTTTC < 41bp 1 0.0340215814792394 1 0.0736582279205322 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6265930 chr10:6265947 nonsynonymous SNV 0.603 4 38 hm5C_associated_SNPs_29613 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:6265942-6265967
64251 chr11 65632560 65632560 1 + C T LUSC 65632544 + 65632524 65632564 41 GGGAACCCTGAATCAGGGGCCATGACCTCTCCAAACCCTCT GGGAACCCTGAATCAGGGGCCATGACCTCTCCAAACTCTCT < 41bp 1 0.207596598598358 1 0.112295538187027 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632544 chr11:65632560 nonsynonymous SNV 0.744 1 37 hm5C_associated_SNPs_29614 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr11:65632540-65632560
64251 chr6 7572250 7572250 1 + A T LUSC 7572244 + 7572224 7572264 41 AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC AGGATGACTCTCAAAAACCTCCCTCTTGCAGACCAGGGATC < 41bp 1 0.0436370583322328 1 0.0381768345832825 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572244 chr6:7572250 synonymous SNV . 0 27 hm5C_associated_SNPs_29618 0 0 6 FXR1 POSTAR2 GSE39682,GSM977619 chr6:7572229-7572251
64251 chr12 112926259 112926259 1 + C T LUSC 112926274 + 112926254 112926294 41 ATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT ATTGGTCGGACAGGGACGTTCATTGTGATTGATATTCTTAT < 41bp 1 0.16704125267352 1 0.0265071988105774 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926274 chr12:112926259 synonymous SNV . 0 6 hm5C_associated_SNPs_29619 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112926227-112926265
64251 chr2 71654035 71654035 1 + G A LUSC 71654019 + 71653999 71654039 41 CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTG CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACACTTG < 41bp 1 0.391514860084859 1 0.299790173768997 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654019 chr2:71654035 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_29620 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr2 71654035 71654035 1 + G A LUSC 71654044 + 71654024 71654064 41 CAAACAGGAACGCTTGGTAACTGTGGATGAAATTGGAGAAG CAAACAGGAACACTTGGTAACTGTGGATGAAATTGGAGAAG < 41bp 1 0.406916739336242 1 0.271393835544586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654044 chr2:71654035 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_29621 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr16 88781041 88781041 1 + G A LUSC 88781052 + 88781032 88781072 41 TCTCTCCCAGATGCAGTCACCCATCCCCCTGACTGAGACCC TCTCTCCCAAATGCAGTCACCCATCCCCCTGACTGAGACCC < 41bp 1 0.0396104573919508 1 0.110013276338577 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781052 chr16:88781041 synonymous SNV . 0 10 hm5C_associated_SNPs_29622 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:88781018-88781052
64251 chr1 44071241 44071241 1 + G T LUSC 44071222 + 44071202 44071242 41 GGTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGG GGTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGTG < 41bp 1 0.0910507091202528 1 0.035233199596405 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071222 chr1:44071241 nonsynonymous SNV 0.785 2 40 hm5C_associated_SNPs_29623 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44071230-44071270
64251 chr1 44071241 44071241 1 + G T LUSC 44071223 + 44071203 44071243 41 GTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGGGA GTTCTACATTGTTGTGGTGCCCATTGACCGTGTGGGCGTGA < 41bp 1 0.050551946011051 1 0.0714450478553772 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44071223 chr1:44071241 nonsynonymous SNV 0.785 2 39 hm5C_associated_SNPs_29624 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44071230-44071270
64251 chr7 77539631 77539631 1 + A G LUSC 77539642 + 77539622 77539662 41 AGATAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA AGATAACACGCAAGAGGGAGCAGTTCAGAACCACGGTACAA < 41bp 1 0.28548608332486 1 0.278238534927368 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77539642 chr7:77539631 synonymous SNV . 0 10 hm5C_associated_SNPs_29625 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:77539630-77539653
64251 chr8 48874090 48874090 1 + G T LUSC 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATTCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA < 41bp 1 0.131029166784271 1 0.085466057062149 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874090 nonsynonymous SNV 0.218 0 7 hm5C_associated_SNPs_29626 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:48874043-48874092
64251 chr10 43604511 43604511 1 + G T LUSC 43604501 + 43604481 43604521 41 CTGGTTCTCAACCGGAACCTCTCCATCTCGGAGAACCGCAC CTGGTTCTCAACCGGAACCTCTCCATCTCGTAGAACCGCAC < 41bp 1 0.624768546229765 1 0.962962031364441 experiment 0.75046290754047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RET ENSG00000165731 CDS Human protein_coding chr10:43604501 chr10:43604511 stopgain 0.283 1 31 hm5C_associated_SNPs_29629 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr19 35741403 35741403 1 + A T LUSC 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCCCGGCCAGCGTCGACTACCAGCTCAATGCCCAGCTGGCA < 41bp 1 0.485143502652826 1 0.441006690263748 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741403 nonsynonymous SNV 0.947 3 18 hm5C_associated_SNPs_29630 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr11 61632657 61632657 1 + C G LUSC 61632668 + 61632648 61632688 41 CAACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTG CAACTTACAGAAGATCGCCCCGCTGGTGAAGTCTCTATGTG < 41bp 1 0.369562681776624 1 0.167953670024872 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632668 chr11:61632657 nonsynonymous SNV 0.189 0 10 hm5C_associated_SNPs_29631 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:61632640-61632660
64251 chr11 61632657 61632657 1 + C G LUSC 61632670 + 61632650 61632690 41 ACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTGCC ACTTACAGAAGATCGCCCCGCTGGTGAAGTCTCTATGTGCC < 41bp 1 0.611377354051996 1 0.483208924531937 experiment 0.777245291896008 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632670 chr11:61632657 nonsynonymous SNV 0.189 0 8 hm5C_associated_SNPs_29632 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:61632640-61632660
64251 chr19 35741402 35741402 1 + C A LUSC 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCCCGGCCAGCGTCGAAAACCAGCTCAATGCCCAGCTGGCA < 41bp 1 0.507914167838858 1 0.243911385536194 experiment 0.984171664322284 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741402 nonsynonymous SNV 0.848 1 17 hm5C_associated_SNPs_29633 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr1 154960758 154960758 1 + G A LUSC 154960745 + 154960725 154960765 41 GTCCTCACAGCAGGGGGCATCGGCCCCACTCATGATGATGT GTCCTCACAGCAGGGGGCATCGGCCCCACTCATAATGATGT < 41bp 1 0.494390642560231 1 0.767724514007568 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960745 chr1:154960758 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_29634 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:154960717-154960759
64251 chr7 44796711 44796711 1 + C T LUSC 44796719 + 44796699 44796739 41 GGCGTGTACAGCCGCGGGGGCTACCCTGGGGCCCCCGGCTT GGCGTGTACAGCTGCGGGGGCTACCCTGGGGCCCCCGGCTT < 41bp 1 0.293563619543049 1 0.11321297287941 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44796719 chr7:44796711 nonsynonymous SNV 0.793 4 13 hm5C_associated_SNPs_29637 0 0 1 PPIG POSTAR2 ENCODE chr7:44796683-44796727
64251 chr19 54649754 54649754 1 + C T LUSC 54649752 + 54649732 54649772 41 ACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTG ACCACCTCCAGCTCTCCCATCCTGCCCAGCCCAGCCAACTG < 41bp 1 0.0858505121021195 1 0.518778920173645 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54649752 chr19:54649754 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_29638 0 0 2 GRWD1 POSTAR2 ENCODE chr19:54649712-54649758
64251 chr3 47382151 47382151 1 + C T LUSC 47382146 + 47382126 47382166 41 TCCCTCAGCTCCGTGGAGACCTACTCACCTGAGACGGACAA TCCCTCAGCTCCGTGGAGACCTACTTACCTGAGACGGACAA < 41bp 1 0.391977597434814 1 0.280788242816925 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47382146 chr3:47382151 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_29642 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:47382118-47382155
64251 chr5 153760011 153760011 1 + G A LUSC 153760010 + 153759990 153760030 41 ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCGCAAG ATCTCTTGGCTTCTTCAGACCACATTGCTCGGAACCGCAAG < 41bp 1 0.164119243544086 1 0.109533876180649 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760010 chr5:153760011 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_29644 0 0 4 DDX6 POSTAR2 ENCODE chr5:153760007-153760011
64251 chr5 153760011 153760011 1 + G A LUSC 153760024 + 153760004 153760044 41 TCAGACCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC TCAGACCACATTGCTCGGAACCGCAAGACCATTGTGTGCCC < 41bp 1 0.35823072461201 1 0.125478118658066 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760024 chr5:153760011 nonsynonymous SNV 0.996 2 8 hm5C_associated_SNPs_29645 0 0 4 DDX6 POSTAR2 ENCODE chr5:153760007-153760011
64251 chr1 36755096 36755096 1 + G A LUSC 36755116 + 36755096 36755136 41 GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA AGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA < 41bp 1 0.435511124567768 1 0.366958528757095 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755116 chr1:36755096 synonymous SNV . 0 1 hm5C_associated_SNPs_29646 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:36755074-36755103
64251 chr17 76060982 76060982 1 + G A LUSC 76061001 + 76060981 76061021 41 TGGCGCACCTGTTGCTGCCTCAGCCCTGTGCAAACCAGGTA TAGCGCACCTGTTGCTGCCTCAGCCCTGTGCAAACCAGGTA < 41bp 1 0.197256923680458 1 0.402330040931702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76061001 chr17:76060982 nonsynonymous SNV 0.014 0 2 hm5C_associated_SNPs_29647 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:76060957-76060985
64251 chr12 863276 863276 1 + G C LUSC 863266 + 863246 863286 41 TGGGGAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGC TGGGGAGCAAAGAGGAGCCGCCGCCGGCGACAAGTGGCAGC < 41bp 1 0.11637970355976 1 0.106083810329437 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:863266 chr12:863276 nonsynonymous SNV 0.867 0 31 hm5C_associated_SNPs_29650 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr12 863276 863276 1 + G C LUSC 863267 + 863247 863287 41 GGGGAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGCG GGGGAGCAAAGAGGAGCCGCCGCCGGCGACAAGTGGCAGCG < 41bp 1 0.57308697044417 1 0.508007645606995 experiment 0.853826059111659 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:863267 chr12:863276 nonsynonymous SNV 0.867 0 30 hm5C_associated_SNPs_29651 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr12 863276 863276 1 + G C LUSC 863270 + 863250 863290 41 GAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGCGGCG GAGCAAAGAGGAGCCGCCGCCGGCGACAAGTGGCAGCGGCG < 41bp 1 0.566453009982677 1 0.910890340805054 experiment 0.867093980034646 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:863270 chr12:863276 nonsynonymous SNV 0.867 0 27 hm5C_associated_SNPs_29652 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr12 863276 863276 1 + G C LUSC 863289 + 863269 863309 41 CCGGCGAGAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCC CCGGCGACAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCC < 41bp 1 0.503324955956327 1 0.781837344169617 experiment 0.993350088087345 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:863289 chr12:863276 nonsynonymous SNV 0.867 0 8 hm5C_associated_SNPs_29653 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr12 863276 863276 1 + G C LUSC 863292 + 863272 863312 41 GCGAGAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCACA GCGACAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCACA < 41bp 1 0.714202145344884 1 0.756537437438965 experiment 0.571595709310232 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:863292 chr12:863276 nonsynonymous SNV 0.867 0 5 hm5C_associated_SNPs_29654 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr12 863276 863276 1 + G C LUSC 863295 + 863275 863315 41 AGAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGA ACAAGTGGCAGCGGCGGCGGCAGCGCCAAGGAGCCACAGGA < 41bp 1 0.458351528703867 1 0.824456572532654 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:863295 chr12:863276 nonsynonymous SNV 0.867 0 2 hm5C_associated_SNPs_29655 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr7 98563377 98563377 1 + G C LUSC 98563380 + 98563360 98563400 41 ACGCGCCTGGCAGTGATGAGCATGGAGATGCGGAAGAACTT ACGCGCCTGGCAGTGATCAGCATGGAGATGCGGAAGAACTT < 41bp 1 0.184097922105349 1 0.409989058971405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98563380 chr7:98563377 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_29656 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:98563359-98563383
64251 chr6 80744986 80744986 1 + A T LUSC 80744989 + 80744969 80745009 41 TTGTTTAATTGCAGTGAAATCACGGACCAGTACATCTACAT TTGTTTAATTGCAGTGATATCACGGACCAGTACATCTACAT < 41bp 1 0.787058044714747 1 0.794852018356323 experiment 0.425883910570506 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTK ENSG00000112742 CDS Human protein_coding chr6:80744989 chr6:80744986 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_29657 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:80744980-80745000
64251 chr19 38610161 38610161 1 + C A LUSC 38610159 + 38610139 38610179 41 GCCGAAAACTGTGTCTCCAACACCCCCATCGACTCCACCGG GCCGAAAACTGTGTCTCCAACAACCCCATCGACTCCACCGG < 41bp 1 0.0901280348068868 1 0.21940153837204 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38610159 chr19:38610161 nonsynonymous SNV 0.989 2 23 hm5C_associated_SNPs_29663 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:38610133-38610166
64251 chrX 41201857 41201857 1 + G A LUSC 41201839 + 41201819 41201859 41 TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGAT TTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAAAT < 41bp 1 0.667157477256645 1 0.151583194732666 experiment 0.66568504548671 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201839 chrX:41201857 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_29664 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201857 41201857 1 + G A LUSC 41201850 + 41201830 41201870 41 GGAAACAGTCGCTGGTGTGACAAATCAGATGAAGATGATTG GGAAACAGTCGCTGGTGTGACAAATCAAATGAAGATGATTG < 41bp 1 0.271820933206589 1 0.629812896251678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201850 chrX:41201857 nonsynonymous SNV 1.000 0 28 hm5C_associated_SNPs_29665 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chrX 41201857 41201857 1 + G A LUSC 41201855 + 41201835 41201875 41 CAGTCGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAA CAGTCGCTGGTGTGACAAATCAAATGAAGATGATTGGTCAA < 41bp 1 0.615534994738788 1 0.712692141532898 experiment 0.768930010522423 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41201855 chrX:41201857 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_29666 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41201740-41201860
64251 chr1 166819255 166819255 1 + C A LUSC 166819242 + 166819222 166819262 41 TCTTGAATGGCTTCCGGGGCCATGCCACAGATTCCGTGAAG TCTTGAATGGCTTCCGGGGCCATGCCACAGATTACGTGAAG < 41bp 1 0.202788318265455 1 0.194574326276779 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166819242 chr1:166819255 nonsynonymous SNV 0.859 4 34 hm5C_associated_SNPs_29671 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:166819220-166819260
64251 chr1 155032736 155032736 1 + G T LUSC 155032751 + 155032731 155032771 41 GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG GTCCTTGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG < 41bp 1 0.558185173328736 1 0.59773725271225 experiment 0.883629653342529 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032751 chr1:155032736 synonymous SNV . 0 6 hm5C_associated_SNPs_29672 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155032721-155032742
64251 chr2 160053216 160053216 1 + C T LUSC 160053224 + 160053204 160053244 41 CTTGTGAGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTG CTTGTGAGTGGTTGCCGGGTCCTCCCCAGCCAGGCACCCTG < 41bp 1 0.0797046791415998 1 0.05685755610466 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160053224 chr2:160053216 nonsynonymous SNV 0.609 0 13 hm5C_associated_SNPs_29673 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:160053209-160053229
64251 chr2 160053216 160053216 1 + C T LUSC 160053230 + 160053210 160053250 41 AGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTGAGGAAG AGTGGTTGCCGGGTCCTCCCCAGCCAGGCACCCTGAGGAAG < 41bp 1 0.524256791962174 1 0.569540917873383 experiment 0.951486416075653 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160053230 chr2:160053216 nonsynonymous SNV 0.609 0 7 hm5C_associated_SNPs_29674 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:160053209-160053229
64251 chr10 135233534 135233534 1 + C T LUSC 135233540 + 135233520 135233560 41 CGTCCCCCAGGTAACGTGAACATTATTCAGCCTAACTATCC CGTCCCCCAGGTAATGTGAACATTATTCAGCCTAACTATCC < 41bp 1 0.18298457933681 1 0.0123807787895203 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135233540 chr10:135233534 synonymous SNV . 0 15 hm5C_associated_SNPs_29675 0 0 3 BUD13 POSTAR2 ENCODE chr10:135233527-135233543
64251 chr1 42925448 42925448 1 + C T LUSC 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTGAGTCATGACAGTCCTTTGTGTTTATTGTA < 41bp 1 0.0975327647032596 1 0.055000364780426 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925448 stopgain 0.857 0 18 hm5C_associated_SNPs_29676 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr19 44732650 44732650 1 + C T LUSC 44732653 + 44732633 44732673 41 TCTCCAGGGAGGAACTGCGACTGCTCGATCTTACCCAGAGG TCTCCAGGGAGGAACTGTGACTGCTCGATCTTACCCAGAGG < 41bp 1 0.735731566295063 1 0.269361466169357 experiment 0.528536867409874 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44732653 chr19:44732650 stopgain 0.465 0 18 hm5C_associated_SNPs_29678 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr19:44732614-44732659
64251 chr16 1793379 1793379 1 + G A LUSC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGAACGTGTTCCCCCTGGCTGACAGCACGGTACG < 41bp 1 0.183994634895468 1 0.0716525912284851 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793379 nonsynonymous SNV 0.542 1 31 hm5C_associated_SNPs_29681 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr16:1793360-1793380
64251 chr19 17450292 17450292 1 + C T LUSC 17450306 + 17450286 17450326 41 CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC CCGTGATGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC < 41bp 1 0.310445997439642 1 0.864112257957458 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450306 chr19:17450292 synonymous SNV . 0 7 hm5C_associated_SNPs_29682 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:17450243-17450297
64251 chr9 134064487 134064487 1 + C T LUSC 134064468 + 134064448 134064488 41 AATAAATTCCCTTAAGCCATCTGGGCCTACACCAGCATCCG AATAAATTCCCTTAAGCCATCTGGGCCTACACCAGCATCTG < 41bp 1 0.551165783505556 1 0.614125370979309 experiment 0.897668432988887 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134064468 chr9:134064487 synonymous SNV . 0 40 hm5C_associated_SNPs_29683 0 0 7 FXR2 POSTAR2 ENCODE chr9:134064473-134064498
64251 chr7 87005004 87005004 1 + C T LUSC 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT TAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT < 41bp 1 0.162785141178221 1 0.329127281904221 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005004 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_29684 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr16 1818251 1818251 1 + T A LUSC 1818253 + 1818233 1818273 41 CCCGTCCCGGGGGCATCATCCACGTGTATGGCGATGACAGC CCCGTCCCGGGGGCATCAACCACGTGTATGGCGATGACAGC < 41bp 1 0.548668523770293 1 0.65506511926651 experiment 0.902662952459415 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818253 chr16:1818251 nonsynonymous SNV 0.920 4 19 hm5C_associated_SNPs_29685 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1818228-1818255
64251 chr16 58043942 58043942 1 + G C LUSC 58043940 + 58043920 58043960 41 TGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGCGCCAC TGTTCCACCTCAGCCTGTCCCACAGTGTGGTTCTGCGCCAC < 41bp 1 0.797588024085499 1 0.461242437362671 experiment 0.404823951829002 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USB1 ENSG00000103005 CDS Human protein_coding chr16:58043940 chr16:58043942 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_29687 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:58043886-58043954
64251 chr22 39826118 39826118 1 + C T LUSC 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTCCGCTCCCGGCCCGCCCACTTGCTCCCGCCTGGCGA < 41bp 1 0.125885176439328 1 0.158393740653992 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826118 nonsynonymous SNV 0.337 1 26 hm5C_associated_SNPs_29688 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr10 5963500 5963500 1 + G T LUSC 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT CGGGTGACGGAATGGGAATTCCCTTCAAGGATACATTTGAT < 41bp 1 0.0834349981506513 1 0.19140562415123 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963500 nonsynonymous SNV 0.812 4 13 hm5C_associated_SNPs_29690 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr10 5963500 5963500 1 + G T LUSC 5963513 + 5963493 5963533 41 GACGGAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG GACGGAATGGGAATTCCCTTCAAGGATACATTTGATTGGGG < 41bp 1 0.639802474489061 1 0.753195881843567 experiment 0.720395051021877 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963513 chr10:5963500 nonsynonymous SNV 0.812 4 8 hm5C_associated_SNPs_29691 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr17 53852192 53852192 1 + C T LUSC 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTCGATAACCCGGGTGGCCAAATTCTGTCCTGGCTCATT < 41bp 1 0.295172663968811 1 0.168204635381699 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852192 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_29692 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:53852170-53852193
64251 chr16 30740303 30740303 1 + A C LUSC 30740289 + 30740269 30740309 41 TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAAAGCGGAA TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAACGCGGAA < 41bp 1 0.0750715682875336 1 0.232941389083862 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30740289 chr16:30740303 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_29693 0 0 18 DGCR8 POSTAR2 GSE39086,GSM955513 chr16:30740300-30740320
64251 chr14 35649910 35649910 1 + G A LUSC 35649907 + 35649887 35649927 41 ATTTGAGAACTTCATAAAATCTCGTCCTCCTTTTGATGTTG ATTTGAGAACTTCATAAAATCTCATCCTCCTTTTGATGTTG < 41bp 1 0.298008279678377 1 0.099660336971283 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35649907 chr14:35649910 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_29694 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:35649900-35649916
64251 chr3 30713554 30713554 1 + C T LUSC 30713566 + 30713546 30713586 41 AAGGACATCTTCTCAGACATCAATCTGAAGCATGAGAACAT AAGGACATTTTCTCAGACATCAATCTGAAGCATGAGAACAT < 41bp 1 0.122287162590567 1 0.046229213476181 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713566 chr3:30713554 synonymous SNV . 0 9 hm5C_associated_SNPs_29695 0 0 1 RBM15 POSTAR2 ENCODE chr3:30713494-30713564
64251 chr2 219609925 219609925 1 + T A LUSC 219609940 + 219609920 219609960 41 CCCCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAA CCCCCAACCATCTATTTTGGCACTCGGGATGAGAGAGGTAA < 41bp 1 0.126620423482276 1 0.0488289594650269 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219609940 chr2:219609925 synonymous SNV . 0 6 hm5C_associated_SNPs_29696 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:219609898-219609931
64251 chr2 219609925 219609925 1 + T A LUSC 219609942 + 219609922 219609962 41 CCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAAAC CCCAACCATCTATTTTGGCACTCGGGATGAGAGAGGTAAAC < 41bp 1 0.551919882338622 1 0.144984751939774 experiment 0.896160235322756 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219609942 chr2:219609925 synonymous SNV . 0 4 hm5C_associated_SNPs_29697 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:219609898-219609931
64251 chr18 13095637 13095637 1 + G A LUSC 13095653 + 13095633 13095673 41 CGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT CGTGAACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT < 41bp 1 0.171859936409406 1 0.0935557186603546 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095653 chr18:13095637 stopgain 0.016 1 5 hm5C_associated_SNPs_29698 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr18 13095637 13095637 1 + G A LUSC 13095655 + 13095635 13095675 41 TGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC TGAACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC < 41bp 1 0.562976169643423 1 0.1068414747715 experiment 0.874047660713154 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095655 chr18:13095637 stopgain 0.016 1 3 hm5C_associated_SNPs_29699 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr3 120315361 120315361 1 + A G LUSC 120315381 + 120315361 120315401 41 ACGATCCCAACCGCCGAGGGCTCATCGTGAGTGTGGGGCCT GCGATCCCAACCGCCGAGGGCTCATCGTGAGTGTGGGGCCT < 41bp 1 0.505039203893455 1 0.0751952826976776 experiment 0.989921592213089 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315381 chr3:120315361 nonsynonymous SNV 0.996 1 1 hm5C_associated_SNPs_29700 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:120315356-120315387
64251 chr14 90866422 90866422 1 + C T LUSC 90866437 + 90866417 90866457 41 GCTGACCGAAGAACAGATTGCTGGTAAGTTGACAACTCCAA GCTGATCGAAGAACAGATTGCTGGTAAGTTGACAACTCCAA < 41bp 1 0.74535603088987 1 0.0962944626808167 experiment 0.50928793822026 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CALM1 ENSG00000198668 CDS Human protein_coding chr14:90866437 chr14:90866422 nonsynonymous SNV 0.997 1 6 hm5C_associated_SNPs_29701 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:90866407-90866433
64251 chr11 86518796 86518796 1 + C T LUSC 86518805 + 86518785 86518825 41 GCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAA GCATACCGCCTTCCTGTCGTCTTGCCCCAGTCTACCCTCAA < 41bp 1 0.229284949068804 1 0.180788367986679 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518805 chr11:86518796 synonymous SNV . 0 12 hm5C_associated_SNPs_29702 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:86518761-86518807
64251 chr16 2818222 2818222 1 + G T LUSC 2818203 + 2818183 2818223 41 TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGTG < 41bp 1 0.0991499290462377 1 0.189061969518661 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818203 chr16:2818222 nonsynonymous SNV 0.996 2 40 hm5C_associated_SNPs_29703 0 0 31 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:2818109-2818226
64251 chr20 42695413 42695413 1 + G T LUSC 42695411 + 42695391 42695431 41 TTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAA TTCCCCAGCAGCTCGGGATCCTTCTCACCTGGCCCATCCAA < 41bp 1 0.159753493904613 1 0.0418576300144196 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695411 chr20:42695413 nonsynonymous SNV 0.876 1 23 hm5C_associated_SNPs_29705 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr3 49212197 49212197 1 + G T LUSC 49212179 + 49212159 49212199 41 CCAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGT CCAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCTGT < 41bp 1 0.0785873779730447 1 0.110293090343475 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212179 chr3:49212197 synonymous SNV . 0 39 hm5C_associated_SNPs_29706 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr3 49212197 49212197 1 + G T LUSC 49212180 + 49212160 49212200 41 CAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGTG CAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCTGTG < 41bp 1 0.637904332703646 1 0.175075113773346 experiment 0.724191334592707 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212180 chr3:49212197 synonymous SNV . 0 38 hm5C_associated_SNPs_29707 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr19 10897259 10897259 1 + G T LUSC 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG TGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG < 41bp 1 0.17900961809398 1 0.193195015192032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897259 nonsynonymous SNV 0.992 3 1 hm5C_associated_SNPs_29711 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10897245-10897280
64251 chr18 8114809 8114809 1 + C G LUSC 8114803 + 8114783 8114823 41 ACACAGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAA ACACAGGAAACCAAAATAGACTGTGTGCAAGTGGCCACAAA < 41bp 1 0.178847305081011 1 0.0419135093688965 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRM ENSG00000173482 CDS Human protein_coding chr18:8114803 chr18:8114809 synonymous SNV . 0 27 hm5C_associated_SNPs_29712 0 0 3 BUD13 POSTAR2 ENCODE chr18:8114781-8114823
64251 chr14 35550321 35550321 1 + G C LUSC 35550328 + 35550308 35550348 41 CATTGTTCAGACAGATCAACCAGAGACAGTGATATCCAGCT CATTGTTCAGACACATCAACCAGAGACAGTGATATCCAGCT < 41bp 1 0.504587630258096 1 0.630190074443817 experiment 0.990824739483807 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM177A1 ENSG00000151327 CDS Human protein_coding chr14:35550328 chr14:35550321 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_29713 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:35550311-35550340
64251 chr1 109241358 109241358 1 + C G LUSC 109241377 + 109241357 109241397 41 TCAACAGATTAAAACCCGACCTAGAAAAATCAAGAAAGATG TGAACAGATTAAAACCCGACCTAGAAAAATCAAGAAAGATG < 41bp 1 0.571525919907641 1 0.23075732588768 experiment 0.856948160184718 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241377 chr1:109241358 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_29715 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:109241275-109241381
64251 chr19 1043767 1043767 1 + G A LUSC 1043784 + 1043764 1043804 41 TCCGGGAGGTGTGGGAGATGCTGGGACCCCGGATCTTCACC TCCAGGAGGTGTGGGAGATGCTGGGACCCCGGATCTTCACC < 41bp 1 0.745644801792049 1 0.870381474494934 experiment 0.508710396415902 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043784 chr19:1043767 nonsynonymous SNV 0.000 1 4 hm5C_associated_SNPs_29717 0 0 3 DDX24 POSTAR2 ENCODE chr19:1043727-1043768
64251 chr17 62223476 62223476 1 + G A LUSC 62223469 + 62223449 62223489 41 ATGACATTCCAATTAAAGCACGTGTTAGACTGCTGACGCGG ATGACATTCCAATTAAAGCACGTGTTAAACTGCTGACGCGG < 41bp 1 0.378123300395625 1 0.364908218383789 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223469 chr17:62223476 . . 0 28 hm5C_associated_SNPs_29718 0 0 112 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223476 62223476 1 + G A LUSC 62223481 + 62223461 62223501 41 TTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCGAACT TTAAAGCACGTGTTAAACTGCTGACGCGGGTGATGCGAACT < 41bp 1 0.345871198165773 1 0.170592427253723 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223481 chr17:62223476 . . 0 16 hm5C_associated_SNPs_29719 0 0 112 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223476 62223476 1 + G A LUSC 62223496 + 62223476 62223516 41 GACTGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGC AACTGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGC < 41bp 1 0.43697625190835 1 0.45729660987854 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223496 chr17:62223476 . . 0 1 hm5C_associated_SNPs_29720 0 0 112 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr7 98591333 98591333 1 + C A LUSC 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCATCGTCGATCAGATGGTATGGTTCAGAGAA < 41bp 1 0.290572022275492 1 0.489031940698624 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591333 synonymous SNV . 0 29 hm5C_associated_SNPs_29723 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98591317-98591358
64251 chr6 32134290 32134290 1 + C G LUSC 32134276 + 32134256 32134296 41 TCCTCTGGCATGGACGCAGTCAGGGAGTCTGCTCCAAGCAG TCCTCTGGCATGGACGCAGTCAGGGAGTCTGCTCGAAGCAG < 41bp 1 0.737385749371329 1 0.836271643638611 experiment 0.525228501257343 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134276 chr6:32134290 synonymous SNV . 0 35 hm5C_associated_SNPs_29724 0 0 4 BUD13 POSTAR2 ENCODE chr6:32134253-32134303
64251 chr2 54886312 54886312 1 + A G LUSC 54886300 + 54886280 54886320 41 TTTTCTCTTAGTTGGAGTTACTGGAAGTGCGCAGACAGCAA TTTTCTCTTAGTTGGAGTTACTGGAAGTGCGCGGACAGCAA < 41bp 1 0.647569565716093 1 0.736757874488831 experiment 0.704860868567814 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886300 chr2:54886312 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_29725 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chr2 54886312 54886312 1 + A G LUSC 54886311 + 54886291 54886331 41 TTGGAGTTACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGA TTGGAGTTACTGGAAGTGCGCGGACAGCAAGAGGAAGAGGA < 41bp 1 0.134844644424465 1 0.46202027797699 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886311 chr2:54886312 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_29726 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chr2 54886312 54886312 1 + A G LUSC 54886315 + 54886295 54886335 41 AGTTACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGG AGTTACTGGAAGTGCGCGGACAGCAAGAGGAAGAGGAGAGG < 41bp 1 0.514973139526333 1 0.637288808822632 experiment 0.970053720947333 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886315 chr2:54886312 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_29727 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chr2 54886312 54886312 1 + A G LUSC 54886318 + 54886298 54886338 41 TACTGGAAGTGCGCAGACAGCAAGAGGAAGAGGAGAGGAAG TACTGGAAGTGCGCGGACAGCAAGAGGAAGAGGAGAGGAAG < 41bp 1 0.713072889735591 1 0.833497881889343 experiment 0.573854220528818 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886318 chr2:54886312 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_29728 0 0 8 BUD13 POSTAR2 ENCODE chr2:54886283-54886396
64251 chrX 41089004 41089004 1 + C A LUSC 41089020 + 41089000 41089040 41 CTTGCAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAA CTTGAAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAA < 41bp 1 0.108350639600774 1 0.184901058673859 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089020 chrX:41089004 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_29729 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41089004-41089005
64251 chr19 14561789 14561789 1 + G T LUSC 14561797 + 14561777 14561817 41 GGGGAGCTGCCCGCCGACCACCCCAAGGGGCGGCTGCTGCG GGGGAGCTGCCCTCCGACCACCCCAAGGGGCGGCTGCTGCG < 41bp 1 0.606673622619706 1 0.5861856341362 experiment 0.786652754760589 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561797 chr19:14561789 nonsynonymous SNV 0.995 0 13 hm5C_associated_SNPs_29730 0 0 5 FXR2 POSTAR2 ENCODE chr19:14561732-14561810
64251 chr2 203421083 203421083 1 + C G LUSC 203421065 + 203421045 203421085 41 GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCGGA < 41bp 1 0.277756359085398 1 0.48128741979599 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203421065 chr2:203421083 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_29731 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:203421060-203421100
64251 chr1 203816447 203816447 1 + C T LUSC 203816460 + 203816440 203816480 41 TCTACTTCAGGAGCAAGAAGCTCCTCCACTATCCGTATCAA TCTACTTTAGGAGCAAGAAGCTCCTCCACTATCCGTATCAA < 41bp 1 0.355429927241108 1 0.245687484741211 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203816460 chr1:203816447 nonsynonymous SNV 0.335 0 8 hm5C_associated_SNPs_29734 0 0 5 BUD13 POSTAR2 ENCODE chr1:203816444-203816506
64251 chr19 13054428 13054428 1 + G A LUSC 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAACGAGACATGGGGCGTAAC < 41bp 1 0.636038658160697 1 0.457737475633621 experiment 0.727922683678606 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054428 synonymous SNV . 0 30 hm5C_associated_SNPs_29735 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054428 13054428 1 + G A LUSC 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGCAACGAGACATGGGGCGTAACAAAGGTGA < 41bp 1 0.661843994332093 1 0.376543790102005 experiment 0.676312011335814 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054428 synonymous SNV . 0 22 hm5C_associated_SNPs_29736 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr16 2812505 2812505 1 + G T LUSC 2812509 + 2812489 2812529 41 AGACGTGGCCGCTCACGCTCCAGAACCCCAGCCAGACGTGG AGACGTGGCCGCTCACTCTCCAGAACCCCAGCCAGACGTGG < 41bp 1 0.669260877164916 1 0.91075736284256 experiment 0.661478245670168 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812509 chr16:2812505 nonsynonymous SNV 0.209 0 17 hm5C_associated_SNPs_29737 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:2812452-2812511
64251 chr2 135180449 135180449 1 + G C LUSC 135180429 + 135180409 135180449 41 CGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGG CGGGCGGCCACATGTGTGGACTGTTGACCTCAACAATCAGC < 41bp 1 0.0761205737098571 1 0.0155433118343353 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135180429 chr2:135180449 nonsynonymous SNV 0.885 0 41 hm5C_associated_SNPs_29738 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:135180442-135180474
64251 chr13 111290867 111290867 1 + G C LUSC 111290847 + 111290827 111290867 41 CATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTG CATGATCGCCGAGGTGGGGGCCGCCTTCAGCAAGCTCTTTC < 41bp 1 0.302304414980232 1 0.210554480552673 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290847 chr13:111290867 stoploss 0.001 3 41 hm5C_associated_SNPs_29739 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290867 111290867 1 + G C LUSC 111290877 + 111290857 111290897 41 CAAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAA CAAGCTCTTTCAAACCTGAGCCCGCGCAGACCAGAAGTAAA < 41bp 1 0.135255732400099 1 0.086175411939621 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290877 chr13:111290867 stoploss 0.001 3 11 hm5C_associated_SNPs_29740 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290867 111290867 1 + G C LUSC 111290878 + 111290858 111290898 41 AAGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAAC AAGCTCTTTCAAACCTGAGCCCGCGCAGACCAGAAGTAAAC < 41bp 1 0.255824873705071 1 0.276206970214844 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290878 chr13:111290867 stoploss 0.001 3 10 hm5C_associated_SNPs_29741 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290867 111290867 1 + G C LUSC 111290879 + 111290859 111290899 41 AGCTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACA AGCTCTTTCAAACCTGAGCCCGCGCAGACCAGAAGTAAACA < 41bp 1 0.406336656119015 1 0.418569803237915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290879 chr13:111290867 stoploss 0.001 3 9 hm5C_associated_SNPs_29742 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr13 111290867 111290867 1 + G C LUSC 111290881 + 111290861 111290901 41 CTCTTTGAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGG CTCTTTCAAACCTGAGCCCGCGCAGACCAGAAGTAAACAGG < 41bp 1 0.487361134794779 1 0.242245018482208 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAXD ENSG00000213995 CDS Human protein_coding chr13:111290881 chr13:111290867 stoploss 0.001 3 7 hm5C_associated_SNPs_29743 0 0 2 LARP4 POSTAR2 ENCODE chr13:111290858-111290908
64251 chr3 111698038 111698038 1 + C G LUSC 111698046 + 111698026 111698066 41 CAGCGGGCGCCACGGTGGCTCCCAGGTCAGTGTCCGAAAGG CAGCGGGCGCCAGGGTGGCTCCCAGGTCAGTGTCCGAAAGG < 41bp 1 0.68436645797759 1 0.251669675111771 experiment 0.631267084044821 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111698046 chr3:111698038 nonsynonymous SNV 0.670 0 13 hm5C_associated_SNPs_29744 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:111698010-111698048
64251 chr5 138994186 138994186 1 + C T LUSC 138994200 + 138994180 138994220 41 GGCAAGCTACAATAATGGGGCCAGTAAGTATTCAGATTAAT GGCAAGTTACAATAATGGGGCCAGTAAGTATTCAGATTAAT < 41bp 1 0.0512228483636824 1 0.0396513342857361 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2D2 ENSG00000131508 CDS Human protein_coding chr5:138994200 chr5:138994186 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_29745 0 0 6 BUD13 POSTAR2 ENCODE chr5:138994162-138994212
64251 chr5 64082381 64082381 1 + C T LUSC 64082382 + 64082362 64082402 41 TCCTTTTGATGACATCATTCCAAGGGAAATTAAAAGGCTGA TCCTTTTGATGACATCATTTCAAGGGAAATTAAAAGGCTGA < 41bp 1 0.495355801146231 1 0.875751733779907 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64082382 chr5:64082381 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_29747 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:64082348-64082392
64251 chr17 7476179 7476179 1 + C T LUSC 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA ATGTCTGCGAGCCAGGATTTCCGGTAAGAAAGGCATTTGCA < 41bp 1 0.426964230449142 1 0.159740924835205 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476179 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_29748 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr17 7476179 7476179 1 + C T LUSC 7476181 + 7476161 7476201 41 TGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA TGTCTGCGAGCCAGGATTTCCGGTAAGAAAGGCATTTGCAA < 41bp 1 0.691471924485688 1 0.683213293552399 experiment 0.617056151028625 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476181 chr17:7476179 nonsynonymous SNV 0.997 1 19 hm5C_associated_SNPs_29749 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr19 39196707 39196707 1 + C T LUSC 39196704 + 39196684 39196724 41 AGACCTCGGCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGA AGACCTCGGCCAAGGAAGGGCTCTTTCTCTGGTGCCAGAGA < 41bp 1 0.0599294787630015 1 0.169633030891418 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39196704 chr19:39196707 nonsynonymous SNV 0.960 5 24 hm5C_associated_SNPs_29750 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39196685-39196714
64251 chr2 27446793 27446793 1 + T C LUSC 27446798 + 27446778 27446818 41 TCAATAGTGTCCAGTTTCACCCAGAGCACCAAGCTGGCCCT TCAATAGTGTCCAGTCTCACCCAGAGCACCAAGCTGGCCCT < 41bp 1 0.324668004667909 1 0.251024127006531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27446798 chr2:27446793 nonsynonymous SNV 0.999 5 16 hm5C_associated_SNPs_29753 0 0 1 DDX24 POSTAR2 ENCODE chr2:27446784-27446801
64251 chr11 4091353 4091353 1 + C T LUSC 4091338 + 4091318 4091358 41 GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCCAAGGA GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCTAAGGA < 41bp 1 0.628556842262116 1 0.74505478143692 experiment 0.742886315475768 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4091338 chr11:4091353 synonymous SNV . 0 36 hm5C_associated_SNPs_29755 0 0 1 DDX24 POSTAR2 ENCODE chr11:4091346-4091434
64251 chr5 43650627 43650627 1 + C T LUSC 43650617 + 43650597 43650637 41 GGTTGGCACTGATGGGAGGACATTTGTATCCTTCCACAACT GGTTGGCACTGATGGGAGGACATTTGTATCTTTCCACAACT < 41bp 1 0.143698621196251 1 0.0447129905223846 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43650617 chr5:43650627 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_29756 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr5:43650622-43650643
64251 chr14 64898345 64898345 1 + C T LUSC 64898346 + 64898326 64898366 41 GGATATTTCATGAACTGACCCAGACAGACAAGGTAGGATGC GGATATTTCATGAACTGACTCAGACAGACAAGGTAGGATGC < 41bp 1 0.302984897461461 1 0.213146090507507 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64898346 chr14:64898345 synonymous SNV . 0 20 hm5C_associated_SNPs_29768 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr14:64898304-64898346
64251 chr14 64898345 64898345 1 + C T LUSC 64898350 + 64898330 64898370 41 ATTTCATGAACTGACCCAGACAGACAAGGTAGGATGCCAAA ATTTCATGAACTGACTCAGACAGACAAGGTAGGATGCCAAA < 41bp 1 0.300917753365056 1 0.15534970164299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64898350 chr14:64898345 synonymous SNV . 0 16 hm5C_associated_SNPs_29769 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr14:64898304-64898346
64251 chr5 14498737 14498737 1 + C T LUSC 14498746 + 14498726 14498766 41 CGTCGGCCAGCCTGAGGGTCCTAGGTAAGCACCGTGCAACG CGTCGGCCAGCTTGAGGGTCCTAGGTAAGCACCGTGCAACG < 41bp 1 0.376823394196964 1 0.144581735134125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14498746 chr5:14498737 synonymous SNV . 0 12 hm5C_associated_SNPs_29770 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14498717-14498739
64251 chr11 65062097 65062097 1 + C T LUSC 65062109 + 65062089 65062129 41 CTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGGTAAGA CTGCTTTTTCACCTGGGGGCCGAGGAGATCAGTAGGTAAGA < 41bp 1 0.538060648210143 1 0.713124930858612 experiment 0.923878703579714 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65062109 chr11:65062097 synonymous SNV . 0 9 hm5C_associated_SNPs_29771 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65062081-65062105
64251 chr10 12162808 12162808 1 + C T LUSC 12162801 + 12162781 12162821 41 TATAGCTCCGTCTGGTGGGCCGGCCCCCTTTGCCAGTACCC TATAGCTCCGTCTGGTGGGCCGGCCCCTTTTGCCAGTACCC < 41bp 1 0.151864017364458 1 0.64630514383316 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12162801 chr10:12162808 nonsynonymous SNV 0.985 1 28 hm5C_associated_SNPs_29773 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr10:12162808-12162809
64251 chr19 39196706 39196706 1 + C T LUSC 39196704 + 39196684 39196724 41 AGACCTCGGCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGA AGACCTCGGCCAAGGAAGGGCTTCTTCTCTGGTGCCAGAGA < 41bp 1 0.0465839089655632 1 0.16102933883667 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39196704 chr19:39196706 synonymous SNV . 0 23 hm5C_associated_SNPs_29775 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39196685-39196714
64251 chr7 94293196 94293196 1 + G A LUSC 94293216 + 94293196 94293236 41 GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG AATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG < 41bp 1 0.178291923693342 1 0.0404290556907654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293216 chr7:94293196 nonsynonymous SNV 0.987 1 1 hm5C_associated_SNPs_29777 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94293155-94293231
64251 chr16 30081499 30081499 1 + G C LUSC 30081505 + 30081485 30081525 41 TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG TGGGGCTGCTGCCACCGAGTCCCTCTTCGTCTCTAACCACG < 41bp 1 0.0609171114170109 1 0.0553370416164398 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081505 chr16:30081499 nonsynonymous SNV 0.986 1 15 hm5C_associated_SNPs_29778 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr16 30081499 30081499 1 + G C LUSC 30081506 + 30081486 30081526 41 GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC GGGGCTGCTGCCACCGAGTCCCTCTTCGTCTCTAACCACGC < 41bp 1 0.0480661172093564 1 0.0564676523208618 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081506 chr16:30081499 nonsynonymous SNV 0.986 1 14 hm5C_associated_SNPs_29779 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr16 30081499 30081499 1 + G C LUSC 30081507 + 30081487 30081527 41 GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC GGGCTGCTGCCACCGAGTCCCTCTTCGTCTCTAACCACGCC < 41bp 1 0.165536895810781 1 0.0583580434322357 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081507 chr16:30081499 nonsynonymous SNV 0.986 1 13 hm5C_associated_SNPs_29780 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr16 30081499 30081499 1 + G C LUSC 30081509 + 30081489 30081529 41 GCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCCTA GCTGCTGCCACCGAGTCCCTCTTCGTCTCTAACCACGCCTA < 41bp 1 0.433706638052606 1 0.108430206775665 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081509 chr16:30081499 nonsynonymous SNV 0.986 1 11 hm5C_associated_SNPs_29781 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr1 161130562 161130562 1 + G A LUSC 161130542 + 161130522 161130562 41 CCAGGGCCCGCAGCAAGGAGCGCAGAAACCCAGCCTCTGGG CCAGGGCCCGCAGCAAGGAGCGCAGAAACCCAGCCTCTGGA < 41bp 1 0.572935559521925 1 0.401352345943451 experiment 0.85412888095615 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130542 chr1:161130562 synonymous SNV . 0 41 hm5C_associated_SNPs_29783 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:161130551-161130589
64251 chr14 90437544 90437544 1 + G C LUSC 90437526 + 90437506 90437546 41 GCTCTCTTTTTAGGAAGAAGCCAATCCTGCTTGTGCATGGT GCTCTCTTTTTAGGAAGAAGCCAATCCTGCTTGTGCATCGT < 41bp 1 0.0751261118822275 1 0.125435292720795 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90437526 chr14:90437544 nonsynonymous SNV 0.987 4 39 hm5C_associated_SNPs_29784 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr14:90437519-90437545
64251 chr5 65350657 65350657 1 + A G LUSC 65350670 + 65350650 65350690 41 TCCTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGCATT TCCTTCAGAAAGACCAAATGCAAGGGTTGGTTCTGAGCATT < 41bp 1 0.621135234752317 1 0.266947865486145 experiment 0.757729530495365 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65350670 chr5:65350657 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_29785 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65350594-65350677
64251 chr22 38282852 38282852 1 + G C LUSC 38282832 + 38282812 38282852 41 ATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAG ATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAC < 41bp 1 0.411579182622846 1 0.734990000724792 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282832 chr22:38282852 nonsynonymous SNV 0.993 1 41 hm5C_associated_SNPs_29787 0 0 4 AGGF1 POSTAR2 ENCODE chr22:38282767-38282856
64251 chr20 4679913 4679913 1 + G C LUSC 4679908 + 4679888 4679928 41 ATGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGGGCCT ATGCTGGTTCTCTTTGTGGCCACATCGAGTGACCTGGGCCT < 41bp 1 0.546881538825059 1 0.597430348396301 experiment 0.906236922349882 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4679908 chr20:4679913 nonsynonymous SNV 0.999 2 26 hm5C_associated_SNPs_29788 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:4679886-4679933
64251 chr11 44626970 44626970 1 + C A LUSC 44626956 + 44626936 44626976 41 CCCAGGTGACGGCCGGGGCCCTCTTCTACTTCAACATGGGC CCCAGGTGACGGCCGGGGCCCTCTTCTACTTCAAAATGGGC < 41bp 1 0.078916223427483 1 0.0518943965435028 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44626956 chr11:44626970 nonsynonymous SNV 0.631 1 35 hm5C_associated_SNPs_29790 0 0 1 SND1 POSTAR2 ENCODE chr11:44626904-44626976
64251 chr20 30822388 30822388 1 + G C LUSC 30822376 + 30822356 30822396 41 CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCGGGAGCGGG CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCCGGAGCGGG < 41bp 1 0.0505084434600768 1 0.0523304045200348 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822376 chr20:30822388 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_29792 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:30822348-30822390
64251 chr5 139917046 139917046 1 + C A LUSC 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACCTCCCCAAATTGGAACAGAGAGACTGGCCCGAATTC < 41bp 1 0.261647533138294 1 0.671898066997528 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917046 nonsynonymous SNV 0.846 4 12 hm5C_associated_SNPs_29793 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:139917021-139917046
64251 chrX 47424386 47424386 1 + A G LUSC 47424395 + 47424375 47424415 41 TGGCATCAGGTACGGAAGACCTTCTTCAGCCTGGCGTTCTG TGGCATCAGGTGCGGAAGACCTTCTTCAGCCTGGCGTTCTG < 41bp 1 0.364265871590796 1 0.331089496612549 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARAF ENSG00000078061 CDS Human protein_coding chrX:47424395 chrX:47424386 synonymous SNV . 0 12 hm5C_associated_SNPs_29794 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:47424380-47424400
64251 chr7 36466549 36466549 1 + G C LUSC 36466562 + 36466542 36466582 41 GGTCTTAGTGCTGTGCGAACCAGCAACTTCGCCCTTGTTGG GGTCTTACTGCTGTGCGAACCAGCAACTTCGCCCTTGTTGG < 41bp 1 0.752851074776425 1 0.868046760559082 experiment 0.494297850447151 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36466562 chr7:36466549 nonsynonymous SNV 0.176 0 8 hm5C_associated_SNPs_29798 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:36466537-36466561
64251 chr2 54856343 54856343 1 + G C LUSC 54856361 + 54856341 54856381 41 CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACA CACTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACA < 41bp 1 0.0165325450269088 1 0.0498818159103394 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856361 chr2:54856343 nonsynonymous SNV 0.996 1 3 hm5C_associated_SNPs_29804 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:54856336-54856357
64251 chr2 54856343 54856343 1 + G C LUSC 54856362 + 54856342 54856382 41 AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACAT ACTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACAT < 41bp 1 0.297520717284024 1 0.0590193271636963 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856362 chr2:54856343 nonsynonymous SNV 0.996 1 2 hm5C_associated_SNPs_29805 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:54856336-54856357
64251 chr13 28197120 28197120 1 + C T LUSC 28197130 + 28197110 28197150 41 TTGTATTGCACGAGGAAGACCATACCCTAGGAAATTCTCTA TTGTATTGCATGAGGAAGACCATACCCTAGGAAATTCTCTA < 41bp 1 0.0365551179816335 1 0.121605843305588 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197130 chr13:28197120 synonymous SNV . 0 11 hm5C_associated_SNPs_29806 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:28197073-28197156
64251 chr16 3339554 3339554 1 + G C LUSC 3339545 + 3339525 3339565 41 GGTCGCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATG GGTCGCAAGGGGATTGGGCGCCTCCCCCACAGGGTGGAATG < 41bp 1 0.0820634019027251 1 0.0905720889568329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339545 chr16:3339554 nonsynonymous SNV 0.300 0 30 hm5C_associated_SNPs_29807 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr16 3339554 3339554 1 + G C LUSC 3339549 + 3339529 3339569 41 GCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATGGAGC GCAAGGGGATTGGGCGCCTCCCCCACAGGGTGGAATGGAGC < 41bp 1 0.482861991060737 1 0.517492055892944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339549 chr16:3339554 nonsynonymous SNV 0.300 0 26 hm5C_associated_SNPs_29808 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr14 73637516 73637516 1 + A G LUSC 73637529 + 73637509 73637549 41 ACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT ACAATAGGGAACGGCAGGAGCACAACGACAGACGGAGCCTT < 41bp 1 0.692378403945098 1 0.224523484706879 experiment 0.615243192109804 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637529 chr14:73637516 synonymous SNV . 0 8 hm5C_associated_SNPs_29809 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr14 73637516 73637516 1 + A G LUSC 73637531 + 73637511 73637551 41 AATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG AATAGGGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG < 41bp 1 0.642139980111368 1 0.293925404548645 experiment 0.715720039777265 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637531 chr14:73637516 synonymous SNV . 0 6 hm5C_associated_SNPs_29810 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73637500-73637520
64251 chr3 50131258 50131258 1 + A G LUSC 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGGGCAAGACCATCATGCTGCGCGGCCTTCCCAT < 41bp 1 0.507773673200949 1 0.424188315868378 experiment 0.984452653598101 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131258 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_29811 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50131144-50131269
64251 chr10 71146157 71146157 1 + G T LUSC 71146158 + 71146138 71146178 41 AGTCACCTTACTAAGGGATGCGATAAAAAGGAGAGAGGTAA AGTCACCTTACTAAGGGATTCGATAAAAAGGAGAGAGGTAA < 41bp 1 0.243563704952648 1 0.358639746904373 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71146158 chr10:71146157 nonsynonymous SNV 0.552 3 20 hm5C_associated_SNPs_29812 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:71146140-71146160
64251 chr5 7885876 7885876 1 + T C LUSC 7885861 + 7885841 7885881 41 GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGT GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCCGAGGT < 41bp 1 0.290767752942409 1 0.0379151403903961 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885861 chr5:7885876 synonymous SNV . 0 36 hm5C_associated_SNPs_29813 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr5 7885876 7885876 1 + T C LUSC 7885862 + 7885842 7885882 41 ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTA ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCCGAGGTA < 41bp 1 0.221402131354659 1 0.0805935561656952 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885862 chr5:7885876 synonymous SNV . 0 35 hm5C_associated_SNPs_29814 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr5 7885876 7885876 1 + T C LUSC 7885863 + 7885843 7885883 41 TGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTAC TGCCTTCAGCGTGATCTGCCCTAACAGTGATTCCGAGGTAC < 41bp 1 0.302729238253002 1 0.0496813356876373 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885863 chr5:7885876 synonymous SNV . 0 34 hm5C_associated_SNPs_29815 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr5 7885876 7885876 1 + T C LUSC 7885875 + 7885855 7885895 41 GATCTGCCCTAACAGTGATTCTGAGGTACAAAGCCTACTCC GATCTGCCCTAACAGTGATTCCGAGGTACAAAGCCTACTCC < 41bp 1 0.570272441136896 1 0.700427949428558 experiment 0.859455117726208 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885875 chr5:7885876 synonymous SNV . 0 22 hm5C_associated_SNPs_29816 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr19 33605294 33605294 1 + A T LUSC 33605274 + 33605254 33605294 41 CCACCTAAACAACAGTCCAGCCCCTTAGTAAACAAAGAGGA CCACCTAAACAACAGTCCAGCCCCTTAGTAAACAAAGAGGT < 41bp 1 0.0706666513917039 1 0.0660060048103333 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33605274 chr19:33605294 nonsynonymous SNV 0.110 0 41 hm5C_associated_SNPs_29817 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:33605286-33605324
64251 chr1 235543450 235543450 1 + T C LUSC 235543456 + 235543436 235543476 41 TTTTGCTGGTGTTGTCCCTCCCGTGGCAGGTAAGCAATTAT TTTTGCTGGTGTTGCCCCTCCCGTGGCAGGTAAGCAATTAT < 41bp 1 0.170251775650868 1 0.583945035934448 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235543456 chr1:235543450 nonsynonymous SNV 0.373 5 15 hm5C_associated_SNPs_29818 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:235543412-235543450
64251 chr8 133855001 133855001 1 + G A LUSC 133855017 + 133854997 133855037 41 TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA TCTCACAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA < 41bp 1 0.521829533908322 1 0.583106398582458 experiment 0.956340932183355 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133855017 chr8:133855001 nonsynonymous SNV 0.256 0 5 hm5C_associated_SNPs_29819 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133854993-133855045
64251 chr9 78506222 78506222 1 + A G LUSC 78506235 + 78506215 78506255 41 GCAGTCAAAATCGCCGGGGGCTTCCCGGAGGCCAACCGTAT GCAGTCAGAATCGCCGGGGGCTTCCCGGAGGCCAACCGTAT < 41bp 1 0.0573210426248113 1 0.0337262153625488 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78506235 chr9:78506222 nonsynonymous SNV 0.998 0 8 hm5C_associated_SNPs_29820 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:78506220-78506222
64251 chr16 24580538 24580538 1 + A G LUSC 24580557 + 24580537 24580577 41 TAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA TGAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA < 41bp 1 0.30231829263749 1 0.340334236621857 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580557 chr16:24580538 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_29821 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:24580536-24580557
64251 chr3 186504021 186504021 1 + C G LUSC 186504005 + 186503985 186504025 41 GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATCAAAT GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATGAAAT < 41bp 1 0.151228274736849 1 0.204333871603012 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504005 chr3:186504021 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_29824 0 0 29 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186503960-186504024
64251 chr19 36124064 36124064 1 + T G LUSC 36124053 + 36124033 36124073 41 CTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCT CTCACCAGGCCCTCGTGGGCCCCCCTCTGCCGGGGCCCCCT < 41bp 1 0.246638777642147 1 0.061575710773468 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124053 chr19:36124064 synonymous SNV . 0 32 hm5C_associated_SNPs_29825 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36124057-36124085
64251 chr10 17278303 17278303 1 + G T LUSC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTTGATTCACTCCCTCTGGTTGATACCCACTCAAAA < 41bp 1 0.273901106176118 1 0.714184761047363 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278303 synonymous SNV . 0 8 hm5C_associated_SNPs_29826 0 0 26 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr10 17278304 17278304 1 + G T LUSC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGTATTCACTCCCTCTGGTTGATACCCACTCAAAA < 41bp 1 0.25027204857785 1 0.724134087562561 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278304 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_29827 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr3 184038429 184038429 1 + A T LUSC 184038413 + 184038393 184038433 41 TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGAGATC TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGTGATC < 41bp 1 0.142685697114709 1 0.425442755222321 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184038413 chr3:184038429 synonymous SNV . 0 37 hm5C_associated_SNPs_29828 0 0 19 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:184038416-184038432
64251 chr12 6638690 6638690 1 + C G LUSC 6638688 + 6638668 6638708 41 CCTTCCTGCAGACAGCTCCTCTCCTACATCACCAAGGACAA CCTTCCTGCAGACAGCTCCTCTGCTACATCACCAAGGACAA < 41bp 1 0.327070604843095 1 0.048491358757019 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6638688 chr12:6638690 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_29829 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:6638680-6638700
64251 chr7 135291499 135291499 1 + G T LUSC 135291502 + 135291482 135291522 41 GTGATTTCTGCATTAAGGATCAGAACTTGAAAAGAAATTAG GTGATTTCTGCATTAAGTATCAGAACTTGAAAAGAAATTAG < 41bp 1 0.25362006236913 1 0.773101210594177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291502 chr7:135291499 nonsynonymous SNV 0.809 0 18 hm5C_associated_SNPs_29830 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr7:135291480-135291500
64251 chr8 48874232 48874232 1 + A G LUSC 48874231 + 48874211 48874251 41 TTTCCAGCCCTCCCCAAATGCATTCTTCAGGTGCGTGTCTG TTTCCAGCCCTCCCCAAATGCGTTCTTCAGGTGCGTGTCTG < 41bp 1 0.107990341758117 1 0.0746995806694031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874231 chr8:48874232 nonsynonymous SNV 0.087 0 22 hm5C_associated_SNPs_29833 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:48874202-48874240
64251 chr14 100367334 100367334 1 + T G LUSC 100367316 + 100367296 100367336 41 TCTGTGACATTGAATACTCTCCACGTCATTGGAATAGGTTT TCTGTGACATTGAATACTCTCCACGTCATTGGAATAGGGTT < 41bp 1 0.218335815579327 1 0.255189836025238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML1 ENSG00000066629 CDS Human protein_coding chr14:100367316 chr14:100367334 synonymous SNV . 0 39 hm5C_associated_SNPs_29834 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:100367310-100367335
64251 chr17 79414117 79414117 1 + A C LUSC 79414114 + 79414094 79414134 41 GGCCTGGGCTTCTCCCTACCCTCAGACGTGCACTCTTCTAA GGCCTGGGCTTCTCCCTACCCTCCGACGTGCACTCTTCTAA < 41bp 1 0.393564176681317 1 0.763557553291321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79414114 chr17:79414117 synonymous SNV . 0 24 hm5C_associated_SNPs_29836 0 0 1 METAP2 POSTAR2 ENCODE chr17:79414075-79414127
64251 chr6 57012772 57012772 1 + G C LUSC 57012758 + 57012738 57012778 41 GAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAA GAATATGTAAAACAGCACTGCATGTCTTTGGCAACCCACAA < 41bp 1 0.0712998217195862 1 0.214650809764862 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012758 chr6:57012772 nonsynonymous SNV 0.964 2 35 hm5C_associated_SNPs_29837 0 0 2 FASTKD2 POSTAR2 ENCODE chr6:57012656-57012794
64251 chr20 279139 279139 1 + G T LUSC 279121 + 279101 279141 41 GGGATCTGGACCGGGGAGTACAAATGCGAGATCGAGCTGCG GGGATCTGGACCGGGGAGTACAAATGCGAGATCGAGCTTCG < 41bp 1 0.568626101274903 1 0.322286307811737 experiment 0.862747797450194 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC3 ENSG00000177764 CDS Human other chr20:279121 chr20:279139 synonymous SNV . 0 39 hm5C_associated_SNPs_29838 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:279065-279139
64251 chr19 48248819 48248819 1 + G T LUSC 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATTGCGGCAGGAGGCAGTGGCGTTG < 41bp 1 0.784912116747736 1 0.306039124727249 experiment 0.430175766504529 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248819 nonsynonymous SNV 0.494 2 19 hm5C_associated_SNPs_29852 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:48248800-48248820
64251 chr5 5464632 5464632 1 + G T LUSC 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCCTGTGCCTTGCCGACTCCCACCCTGTGCATCTGGC < 41bp 1 0.142316033718031 1 0.253143131732941 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464632 nonsynonymous SNV 0.966 3 15 hm5C_associated_SNPs_29854 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr5:5464613-5464634
64251 chr2 233681609 233681609 1 + T C LUSC 233681615 + 233681595 233681635 41 AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGC AAGAGAGGCAGAAACGAGGGCAAAACGGGAAGAGGAAGAGC < 41bp 1 0.278251124997087 1 0.345849931240082 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681615 chr2:233681609 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_29855 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:233681600-233681620
64251 chr2 109400076 109400076 1 + G T LUSC 109400063 + 109400043 109400083 41 TTTTTTCAGGGAGGAGATATCACCAAACATGATGGAACAGG TTTTTTCAGGGAGGAGATATCACCAAACATGATTGAACAGG < 41bp 1 0.648627031531292 1 0.499713212251663 experiment 0.702745936937415 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109400063 chr2:109400076 stopgain 0.997 0 34 hm5C_associated_SNPs_29856 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:109400058-109400104
64251 chr19 19035055 19035055 1 + C G LUSC 19035045 + 19035025 19035065 41 CACATCCTTCCCGCCAGGACCTGCCAGATTCTGTGCATGAT CACATCCTTCCCGCCAGGACCTGCCAGATTGTGTGCATGAT < 41bp 1 0.184414267022263 1 0.105171382427216 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX49 ENSG00000105671 CDS Human protein_coding chr19:19035045 chr19:19035055 nonsynonymous SNV 0.997 1 31 hm5C_associated_SNPs_29857 0 0 1 YBX3 POSTAR2 ENCODE chr19:19035041-19035070
64251 chr9 79996916 79996916 1 + G A LUSC 79996920 + 79996900 79996940 41 AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTC AGACTTCTGAAGTGGAAAGTCTGCGACCTCCTCGGTTCTTC < 41bp 1 0.468985523725108 1 0.443480342626572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS13A ENSG00000197969 CDS Human protein_coding chr9:79996920 chr9:79996916 synonymous SNV . 0 17 hm5C_associated_SNPs_29859 0 0 3 EIF3H POSTAR2 ENCODE chr9:79996893-79996995
64251 chr3 183854505 183854505 1 + C T LUSC 183854500 + 183854480 183854520 41 TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATT TGTCTTTTGTTGCTGGAAAGCTGCTTAAATCAAAGAACATT < 41bp 1 0.411918078834918 1 0.323174476623535 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183854500 chr3:183854505 stopgain 1.000 1 26 hm5C_associated_SNPs_29860 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183854474-183854505
64251 chrX 153627899 153627899 1 + A T LUSC 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGAGTTTCCGCTTTGTGGCCACTTGGTGTCAGATGAATAT < 41bp 1 0.158508103043697 1 0.180514931678772 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627899 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_29861 0 0 61 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627825-153627935
64251 chr17 74944109 74944109 1 + C A LUSC 74944107 + 74944087 74944127 41 GCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGCCC GCACCGACACCTGCCTGGACCAAGGGCTAATCTGTGAGCCC < 41bp 1 0.699105100479481 1 0.86231529712677 experiment 0.601789799041037 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74944107 chr17:74944109 nonsynonymous SNV 0.471 2 23 hm5C_associated_SNPs_29869 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:74944087-74944144
64251 chr7 2473351 2473351 1 + C A LUSC 2473368 + 2473348 2473388 41 GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA GGAACGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA < 41bp 1 0.325716474173689 1 0.0812305212020874 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473368 chr7:2473351 nonsynonymous SNV 0.024 1 4 hm5C_associated_SNPs_29870 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chr1 233514933 233514933 1 + C T LUSC 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACTGTCCTTCTGGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.293624008046817 1 0.0498450994491577 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514933 synonymous SNV . 0 10 hm5C_associated_SNPs_29872 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr20 62368988 62368988 1 + C T LUSC 62368995 + 62368975 62369015 41 TGGGCGCTGTGCACAGCCTGCCGCAGGTAGGTCCCTCAGCC TGGGCGCTGTGCATAGCCTGCCGCAGGTAGGTCCCTCAGCC < 41bp 1 0.548950026652671 1 0.322125434875488 experiment 0.902099946694659 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIME1 ENSG00000203896 CDS Human protein_coding chr20:62368995 chr20:62368988 nonsynonymous SNV 0.340 2 14 hm5C_associated_SNPs_29873 0 0 3 PPIG POSTAR2 ENCODE chr20:62368959-62368995
64251 chr1 153742723 153742723 1 + C T LUSC 153742703 + 153742683 153742723 41 TAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTC TAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTT < 41bp 1 0.60873858370441 1 0.329465448856354 experiment 0.782522832591181 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153742703 chr1:153742723 synonymous SNV . 0 41 hm5C_associated_SNPs_29874 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:153742713-153742747
64251 chr12 132325159 132325159 1 + C T LUSC 132325139 + 132325119 132325159 41 GTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACAC GTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACAT < 41bp 1 0.160604469402091 1 0.0534761548042297 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325139 chr12:132325159 nonsynonymous SNV 0.027 1 41 hm5C_associated_SNPs_29875 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:132325073-132325162
64251 chr3 170110086 170110086 1 + G A LUSC 170110073 + 170110053 170110093 41 GAACTGAGGCAGAGATTGGACCATGCTGAGGCCGATAGGCA GAACTGAGGCAGAGATTGGACCATGCTGAGGCCAATAGGCA < 41bp 1 0.175865304799244 1 0.111410796642303 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110073 chr3:170110086 nonsynonymous SNV 0.503 5 34 hm5C_associated_SNPs_29877 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr3 170110086 170110086 1 + G A LUSC 170110085 + 170110065 170110105 41 AGATTGGACCATGCTGAGGCCGATAGGCAAGAACTCCAAGA AGATTGGACCATGCTGAGGCCAATAGGCAAGAACTCCAAGA < 41bp 1 0.599381643334196 1 0.0823589563369751 experiment 0.801236713331609 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110085 chr3:170110086 nonsynonymous SNV 0.503 5 22 hm5C_associated_SNPs_29878 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr3 170110086 170110086 1 + G A LUSC 170110100 + 170110080 170110120 41 GAGGCCGATAGGCAAGAACTCCAAGATGAACTCAGACAGGA GAGGCCAATAGGCAAGAACTCCAAGATGAACTCAGACAGGA < 41bp 1 0.500140954010269 1 0.567641377449036 experiment 0.999718091979462 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170110100 chr3:170110086 nonsynonymous SNV 0.503 5 7 hm5C_associated_SNPs_29879 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr1 979373 979373 1 + G T LUSC 979380 + 979360 979400 41 GCAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGC GCAGACACAGATCTAGGAGGCCCGGGCAGGGCCGTGCGAGC < 41bp 1 0.38127897994518 1 0.48004487156868 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979380 chr1:979373 stopgain 0.590 1 14 hm5C_associated_SNPs_29880 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979373 979373 1 + G T LUSC 979381 + 979361 979401 41 CAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCA CAGACACAGATCTAGGAGGCCCGGGCAGGGCCGTGCGAGCA < 41bp 1 0.373073721762758 1 0.25777193903923 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979381 chr1:979373 stopgain 0.590 1 13 hm5C_associated_SNPs_29881 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979373 979373 1 + G T LUSC 979382 + 979362 979402 41 AGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAG AGACACAGATCTAGGAGGCCCGGGCAGGGCCGTGCGAGCAG < 41bp 1 0.594411557267576 1 0.777095317840576 experiment 0.811176885464849 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979382 chr1:979373 stopgain 0.590 1 12 hm5C_associated_SNPs_29882 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979373 979373 1 + G T LUSC 979391 + 979371 979411 41 TCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG TCTAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG < 41bp 1 0.31396079482592 1 0.465048879384995 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979391 chr1:979373 stopgain 0.590 1 3 hm5C_associated_SNPs_29883 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979373 979373 1 + G T LUSC 979392 + 979372 979412 41 CGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG CTAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG < 41bp 1 0.330625370571745 1 0.58686363697052 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979392 chr1:979373 stopgain 0.590 1 2 hm5C_associated_SNPs_29884 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr9 36204115 36204115 1 + G A LUSC 36204107 + 36204087 36204127 41 AGCAGAGTGGAAAGAAAAGGCAATAAAGGAGCTAGAAGAAT AGCAGAGTGGAAAGAAAAGGCAATAAAGAAGCTAGAAGAAT < 41bp 1 0.41568179035785 1 0.268869787454605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTA ENSG00000122705 CDS Human protein_coding chr9:36204107 chr9:36204115 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_29886 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr9:36204091-36204152
64251 chr9 36204115 36204115 1 + G A LUSC 36204118 + 36204098 36204138 41 AAGAAAAGGCAATAAAGGAGCTAGAAGAATGGTATGCAAGA AAGAAAAGGCAATAAAGAAGCTAGAAGAATGGTATGCAAGA < 41bp 1 0.780866105137008 1 0.514090895652771 experiment 0.438267789725984 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLTA ENSG00000122705 CDS Human protein_coding chr9:36204118 chr9:36204115 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_29887 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr9:36204091-36204152
64251 chr1 36026502 36026502 1 + G A LUSC 36026504 + 36026484 36026524 41 GCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCT GCCCCTCTTTTTGCCCCCAACAACCGTGCCCCCTGAATGCT < 41bp 1 0.260043143174639 1 0.222751796245575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026504 chr1:36026502 synonymous SNV . 0 19 hm5C_associated_SNPs_29893 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr1 36026502 36026502 1 + G A LUSC 36026508 + 36026488 36026528 41 CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCTACCG CTCTTTTTGCCCCCAACAACCGTGCCCCCTGAATGCTACCG < 41bp 1 0.193553149302699 1 0.500741422176361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026508 chr1:36026502 synonymous SNV . 0 15 hm5C_associated_SNPs_29894 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr22 40660695 40660695 1 + C G LUSC 40660713 + 40660693 40660733 41 CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATT CTGAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATT < 41bp 1 0.0743175701768639 1 0.0606448948383331 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40660713 chr22:40660695 stopgain 1.000 1 3 hm5C_associated_SNPs_29895 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40660691-40660715
64251 chr19 54711357 54711357 1 + G T LUSC 54711362 + 54711342 54711382 41 CGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAG CGCTCTCCCTACGGGTGTGGCCGCCCGGGCCGCGTGAAGAG < 41bp 1 0.342223143814169 1 0.141463369131088 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711362 chr19:54711357 nonsynonymous SNV 0.121 2 16 hm5C_associated_SNPs_29897 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54711343-54711364
64251 chr19 54711357 54711357 1 + G T LUSC 54711363 + 54711343 54711383 41 GCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGG GCTCTCCCTACGGGTGTGGCCGCCCGGGCCGCGTGAAGAGG < 41bp 1 0.575569392982085 1 0.43853434920311 experiment 0.84886121403583 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711363 chr19:54711357 nonsynonymous SNV 0.121 2 15 hm5C_associated_SNPs_29898 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54711343-54711364
64251 chr6 35436793 35436793 1 + G T LUSC 35436813 + 35436793 35436833 41 GGGCACCGTCAGGTTGGCACCGTTCTGATCCCACCCAGCCC TGGCACCGTCAGGTTGGCACCGTTCTGATCCCACCCAGCCC < 41bp 1 0.154831041454596 1 0.118504345417023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436813 chr6:35436793 synonymous SNV . 0 1 hm5C_associated_SNPs_29899 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:35436731-35436819
64251 chr4 184129113 184129113 1 + G T LUSC 184129110 + 184129090 184129130 41 CACCTAATGTTTTCAGAAACCACGCAGATAGAAGATCCAAG CACCTAATGTTTTCAGAAACCACTCAGATAGAAGATCCAAG < 41bp 1 0.0661250894115425 1 0.127796471118927 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184129110 chr4:184129113 synonymous SNV . 0 24 hm5C_associated_SNPs_29900 0 0 2 BUD13 POSTAR2 ENCODE chr4:184129111-184129213
64251 chr4 184129113 184129113 1 + G T LUSC 184129126 + 184129106 184129146 41 AAACCACGCAGATAGAAGATCCAAGAAAACAATGGAGGGGG AAACCACTCAGATAGAAGATCCAAGAAAACAATGGAGGGGG < 41bp 1 0.110119844830344 1 0.371095776557922 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184129126 chr4:184129113 synonymous SNV . 0 8 hm5C_associated_SNPs_29901 0 0 2 BUD13 POSTAR2 ENCODE chr4:184129111-184129213
64251 chr5 92923917 92923917 1 + G T LUSC 92923934 + 92923914 92923954 41 TACGCCTCACCTGGAGCGAGCTGTTCGTGCTCAACGCGGCC TACTCCTCACCTGGAGCGAGCTGTTCGTGCTCAACGCGGCC < 41bp 1 0.108200930307487 1 0.0628942847251892 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923934 chr5:92923917 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_29902 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:92923891-92923917
64251 chr16 29989123 29989123 1 + G A LUSC 29989108 + 29989088 29989128 41 GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTAAAGGA < 41bp 1 0.54073759472661 1 0.590691208839417 experiment 0.918524810546779 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989108 chr16:29989123 synonymous SNV . 0 36 hm5C_associated_SNPs_29903 0 0 1 SF3B1 POSTAR2 ENCODE chr16:29989116-29989140
64251 chr16 29989123 29989123 1 + G A LUSC 29989109 + 29989089 29989129 41 CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTAAAGGAC < 41bp 1 0.447455612933627 1 0.593907475471497 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989109 chr16:29989123 synonymous SNV . 0 35 hm5C_associated_SNPs_29904 0 0 1 SF3B1 POSTAR2 ENCODE chr16:29989116-29989140
64251 chrX 73046593 73046593 1 - A T LUSC 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGAAAGAGGACCCAAGCGAAAAAGGTATCTCA < 41bp 1 0.0838294849639049 1 0.187224388122559 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046593 . . 0 13 hm5C_associated_SNPs_29905 0 0 64 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046593 73046593 1 - A T LUSC 73046606 - 73046586 73046626 41 GAAGGCCCCTGTCACAAAGCCTACCTAGATGGATAGAGGAC GAAGGCCCCTGTCACAAAGCCTACCTAGATGGAAAGAGGAC < 41bp 1 0.0921494328342301 1 0.0769659578800201 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046606 chrX:73046593 . . 0 34 hm5C_associated_SNPs_29906 0 0 64 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046593 73046593 1 - A T LUSC 73046612 - 73046592 73046632 41 AGGATGGAAGGCCCCTGTCACAAAGCCTACCTAGATGGATA AGGATGGAAGGCCCCTGTCACAAAGCCTACCTAGATGGAAA < 41bp 1 0.257754968157019 1 0.425182580947876 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046612 chrX:73046593 . . 0 40 hm5C_associated_SNPs_29907 0 0 64 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr8 48874091 48874091 1 + C A LUSC 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGACAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA < 41bp 1 0.17647431861161 1 0.0679217278957367 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874091 nonsynonymous SNV 0.141 0 8 hm5C_associated_SNPs_29910 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:48874043-48874092
64251 chr3 12422963 12422963 1 + T C LUSC 12422970 + 12422950 12422990 41 CTGGATTTCACTATGGAGTTCATGCTTGTGAAGGATGCAAG CTGGATTTCACTACGGAGTTCATGCTTGTGAAGGATGCAAG < 41bp 1 0.109508023842278 1 0.0534103214740753 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPARG ENSG00000132170 CDS Human protein_coding chr3:12422970 chr3:12422963 synonymous SNV . 0 14 hm5C_associated_SNPs_29911 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12422923-12422963
64251 chr17 77757723 77757723 1 + C T LUSC 77757717 + 77757697 77757737 41 CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGA CCAAACCCGAGCTGAAGGATCCCATCTGGAAGAAGCGGGGA < 41bp 1 0.165838050769813 1 0.104898750782013 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77757717 chr17:77757723 nonsynonymous SNV 0.713 3 27 hm5C_associated_SNPs_29912 0 0 1 PPIG POSTAR2 ENCODE chr17:77757695-77757764
64251 chr4 144460047 144460047 1 + T A LUSC 144460033 + 144460013 144460053 41 TGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATG TGGCATCAATCTTGCGACTGCTGATGTAGTAATTATGTATG < 41bp 1 0.245763934501489 1 0.297051608562469 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144460033 chr4:144460047 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_29915 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:144459996-144460085
64251 chr16 8735029 8735029 1 + G A LUSC 8735032 + 8735012 8735052 41 TGGACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTC TGGACTGGCTGAAGGACAACCTCTGCACAGGTGTGTGTTTC < 41bp 1 0.296019563947509 1 0.460259109735489 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735032 chr16:8735029 nonsynonymous SNV 0.974 0 18 hm5C_associated_SNPs_29917 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8734998-8735039
64251 chr1 27105921 27105921 1 + G A LUSC 27105939 + 27105919 27105959 41 TGGCGGATTGGTGGGGGGGACACCACTGAGCATATCCAGAC TGACGGATTGGTGGGGGGGACACCACTGAGCATATCCAGAC < 41bp 1 0.704273036269293 1 0.388163059949875 experiment 0.591453927461415 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27105939 chr1:27105921 stopgain 1.000 1 3 hm5C_associated_SNPs_29919 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr1:27105850-27105936
64251 chr10 70525822 70525822 1 + G C LUSC 70525803 + 70525783 70525823 41 TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAAGA TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAACA < 41bp 1 0.230450859431968 1 0.31879734992981 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70525803 chr10:70525822 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_29920 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70525699-70525836
64251 chr5 176001165 176001165 1 + A G LUSC 176001161 + 176001141 176001181 41 TCTGCAGGCATGGTCGTGTACTCCATAGAGAAGGTGAGTGT TCTGCAGGCATGGTCGTGTACTCCGTAGAGAAGGTGAGTGT < 41bp 1 0.688794718130673 1 0.345861375331879 experiment 0.622410563738654 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CDHR2 ENSG00000074276 CDS Human protein_coding chr5:176001161 chr5:176001165 nonsynonymous SNV 0.806 1 25 hm5C_associated_SNPs_29921 0 0 1 EFTUD2 POSTAR2 ENCODE chr5:176001163-176001233
64251 chr4 53579444 53579444 1 + T C LUSC 53579434 + 53579414 53579454 41 CTGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAA CTGTGCCCTTTTAAGGTTGACCCAGTGCTTCAAGAGGCTAA < 41bp 1 0.119632056990877 1 0.0876375734806061 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579434 chr4:53579444 . . 0 31 hm5C_associated_SNPs_29922 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579435 + 53579415 53579455 41 TGTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAAC TGTGCCCTTTTAAGGTTGACCCAGTGCTTCAAGAGGCTAAC < 41bp 1 0.149338145315398 1 0.322497606277466 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579435 chr4:53579444 . . 0 30 hm5C_associated_SNPs_29923 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579436 + 53579416 53579456 41 GTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACA GTGCCCTTTTAAGGTTGACCCAGTGCTTCAAGAGGCTAACA < 41bp 1 0.285028839417983 1 0.494164198637009 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579436 chr4:53579444 . . 0 29 hm5C_associated_SNPs_29924 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579441 + 53579421 53579461 41 CTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACACAGAA CTTTTAAGGTTGACCCAGTGCTTCAAGAGGCTAACACAGAA < 41bp 1 0.425759230509418 1 0.358133673667908 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579441 chr4:53579444 . . 0 24 hm5C_associated_SNPs_29925 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579451 + 53579431 53579471 41 TGACCCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTA TGACCCAGTGCTTCAAGAGGCTAACACAGAAGGGTAAAGTA < 41bp 1 0.140297456896568 1 0.183743447065353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579451 chr4:53579444 . . 0 14 hm5C_associated_SNPs_29926 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579455 + 53579435 53579475 41 CCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTC CCAGTGCTTCAAGAGGCTAACACAGAAGGGTAAAGTAAGTC < 41bp 1 0.333558995609628 1 0.35251384973526 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579455 chr4:53579444 . . 0 10 hm5C_associated_SNPs_29927 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579444 53579444 1 + T C LUSC 53579457 + 53579437 53579477 41 AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTCTC AGTGCTTCAAGAGGCTAACACAGAAGGGTAAAGTAAGTCTC < 41bp 1 0.70036917187585 1 0.723365664482117 experiment 0.5992616562483 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579457 chr4:53579444 . . 0 8 hm5C_associated_SNPs_29928 0 0 33 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr16 71956497 71956497 1 + G C LUSC 71956504 + 71956484 71956524 41 AGTTGGTGGACCTGATGGAACGGTGCCAATGCCCATGCCCA AGTTGGTGGACCTCATGGAACGGTGCCAATGCCCATGCCCA < 41bp 1 0.646629558301732 1 0.306204438209534 experiment 0.706740883396535 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IST1 ENSG00000182149 CDS Human protein_coding chr16:71956504 chr16:71956497 nonsynonymous SNV 0.997 2 14 hm5C_associated_SNPs_29929 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:71956477-71956499
64251 chr15 22962537 22962537 1 + A T LUSC 22962534 + 22962514 22962554 41 GCTACGAGACGCTGCTGAAGCAGAGGCATGTGCAGGTGAGC GCTACGAGACGCTGCTGAAGCAGTGGCATGTGCAGGTGAGC < 41bp 1 0.550700649847753 1 0.698631525039673 experiment 0.898598700304495 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22962534 chr15:22962537 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_29934 0 0 5 FMR1 POSTAR2 ENCODE chr15:22962477-22962549
64251 chr15 85326210 85326210 1 + C T LUSC 85326199 + 85326179 85326219 41 ACACAATGGATTCCGGGGCTCAGATCTGCCTCCAGATCCCC ACACAATGGATTCCGGGGCTCAGATCTGCCTTCAGATCCCC < 41bp 1 0.367837858193798 1 0.0912433266639709 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326199 chr15:85326210 nonsynonymous SNV 0.960 0 32 hm5C_associated_SNPs_29935 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:85326180-85326215
64251 chr3 9784741 9784741 1 + C G LUSC 9784735 + 9784715 9784755 41 GATGATTTTGAGGAGGACTTCAACCTCATCGTCAGCAACTG GATGATTTTGAGGAGGACTTCAACCTGATCGTCAGCAACTG < 41bp 1 0.319808257731258 1 0.308714091777802 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9784735 chr3:9784741 synonymous SNV . 0 27 hm5C_associated_SNPs_29942 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:9784718-9784745
64251 chr3 58112437 58112437 1 + C T LUSC 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTTGCACCGGGGGATTACGATGTTA < 41bp 1 0.442523537051282 1 0.0712225139141083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112437 synonymous SNV . 0 19 hm5C_associated_SNPs_29943 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112437 58112437 1 + C T LUSC 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTTGCACCGGGGGATTACGATGTTAAT < 41bp 1 0.233636701249553 1 0.306386470794678 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112437 synonymous SNV . 0 17 hm5C_associated_SNPs_29944 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112437 58112437 1 + C T LUSC 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTTGCACCGGGGGATTACGATGTTAATA < 41bp 1 0.462730466652556 1 0.869012236595154 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112437 synonymous SNV . 0 16 hm5C_associated_SNPs_29945 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr6 43143550 43143550 1 + C G LUSC 43143562 + 43143542 43143582 41 CGGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGT CGGCCCCTGCTTTCCCATCACCAACTACCTGGCACCAGTGT < 41bp 1 0.0508617824204174 1 0.13621324300766 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143562 chr6:43143550 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_29946 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr6 43143550 43143550 1 + C G LUSC 43143563 + 43143543 43143583 41 GGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTC GGCCCCTGCTTTCCCATCACCAACTACCTGGCACCAGTGTC < 41bp 1 0.179495948848282 1 0.0477953553199768 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143563 chr6:43143550 nonsynonymous SNV 0.999 4 8 hm5C_associated_SNPs_29947 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr6 43143550 43143550 1 + C G LUSC 43143566 + 43143546 43143586 41 CCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTCTGC CCCTGCTTTCCCATCACCAACTACCTGGCACCAGTGTCTGC < 41bp 1 0.210619095466751 1 0.0435287654399872 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143566 chr6:43143550 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_29948 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr19 36370332 36370332 1 + G C LUSC 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC CGCTTCCTGGAGCAACGACCCTGACCCGGCCCCCTTCACCC < 41bp 1 0.38706149005108 1 0.182875156402588 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370340 chr19:36370332 nonsynonymous SNV 0.998 1 13 hm5C_associated_SNPs_29949 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36370316-36370342
64251 chr14 60591903 60591903 1 + G C LUSC 60591886 + 60591866 60591906 41 GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTC GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTCGTC < 41bp 1 0.772256910643184 1 0.698272466659546 experiment 0.455486178713632 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591886 chr14:60591903 nonsynonymous SNV 0.996 4 38 hm5C_associated_SNPs_29950 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr14:60591880-60591920
64251 chr12 109604776 109604776 1 + G T LUSC 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACACGCTTTGTGGGGGATCGGGTCATCGAGAAGGTACAG < 41bp 1 0.470607515787964 1 0.689505398273468 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604776 nonsynonymous SNV 0.942 3 13 hm5C_associated_SNPs_29951 0 0 3 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr2 70122270 70122270 1 + C T LUSC 70122272 + 70122252 70122292 41 CGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG CGGGAGAGAGAACGCAGGTGCCGAGAAAGGTCCAGGTCTCG < 41bp 1 0.762951745582457 1 0.482309073209763 experiment 0.474096508835086 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122272 chr2:70122270 nonsynonymous SNV 0.987 4 19 hm5C_associated_SNPs_29952 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:70122223-70122274
64251 chr2 171818196 171818196 1 + C T LUSC 171818210 + 171818190 171818230 41 TTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCC TTATTGTCACCACAAGTAAACCAGTCCCTCACTTCTGTGCC < 41bp 1 0.209315311069197 1 0.0920523405075073 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818210 chr2:171818196 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_29953 0 0 1 IGF2BP1 POSTAR2 ENCODE chr2:171818172-171818201
64251 chr6 7231550 7231550 1 + C T LUSC 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTT < 41bp 1 0.607493058025927 1 0.970149159431458 experiment 0.785013883948146 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231550 nonsynonymous SNV 0.953 4 41 hm5C_associated_SNPs_29954 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:7231542-7231564
64251 chr8 48885519 48885519 1 + A G LUSC 48885502 + 48885482 48885522 41 ACCTGGTCGCACTGTACTACCAGAGCGAGGAGCAGGCAGAG ACCTGGTCGCACTGTACTACCAGAGCGAGGAGCAGGCGGAG < 41bp 1 0.747339561465889 1 0.413239002227783 experiment 0.505320877068221 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48885502 chr8:48885519 synonymous SNV . 0 38 hm5C_associated_SNPs_29955 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48885468-48885565
64251 chr12 57919821 57919821 1 + C T LUSC 57919802 + 57919782 57919822 41 GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTTA < 41bp 1 0.0255829689978964 1 0.00925737619400024 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919802 chr12:57919821 nonsynonymous SNV 0.893 1 40 hm5C_associated_SNPs_29956 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919803 + 57919783 57919823 41 AAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT AAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTTAT < 41bp 1 0.118491396857241 1 0.0270979702472687 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919803 chr12:57919821 nonsynonymous SNV 0.893 1 39 hm5C_associated_SNPs_29957 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919804 + 57919784 57919824 41 AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTTATC < 41bp 1 0.446665236579607 1 0.0761764049530029 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919804 chr12:57919821 nonsynonymous SNV 0.893 1 38 hm5C_associated_SNPs_29958 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919806 + 57919786 57919826 41 GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCAC GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTTATCAC < 41bp 1 0.595128567479239 1 0.56067281961441 experiment 0.809742865041521 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919806 chr12:57919821 nonsynonymous SNV 0.893 1 36 hm5C_associated_SNPs_29959 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919809 + 57919789 57919829 41 CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTC CCGTGCCCAGGCACCCTCAGCTTCCCACTCCTTATCACTTC < 41bp 1 0.0910234021582488 1 0.156584233045578 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919809 chr12:57919821 nonsynonymous SNV 0.893 1 33 hm5C_associated_SNPs_29960 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919812 + 57919792 57919832 41 TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTC TGCCCAGGCACCCTCAGCTTCCCACTCCTTATCACTTCGTC < 41bp 1 0.0581463345339433 1 0.0372719168663025 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919812 chr12:57919821 nonsynonymous SNV 0.893 1 30 hm5C_associated_SNPs_29961 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919813 + 57919793 57919833 41 GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCC GCCCAGGCACCCTCAGCTTCCCACTCCTTATCACTTCGTCC < 41bp 1 0.082026329952696 1 0.104518473148346 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919813 chr12:57919821 nonsynonymous SNV 0.893 1 29 hm5C_associated_SNPs_29962 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919814 + 57919794 57919834 41 CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCC CCCAGGCACCCTCAGCTTCCCACTCCTTATCACTTCGTCCC < 41bp 1 0.149255330589482 1 0.0393635034561157 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919814 chr12:57919821 nonsynonymous SNV 0.893 1 28 hm5C_associated_SNPs_29963 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 57919821 57919821 1 + C T LUSC 57919816 + 57919796 57919836 41 CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCCTC CAGGCACCCTCAGCTTCCCACTCCTTATCACTTCGTCCCTC < 41bp 1 0.366829222651061 1 0.347386986017227 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919816 chr12:57919821 nonsynonymous SNV 0.893 1 26 hm5C_associated_SNPs_29964 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:57919808-57919821
64251 chr12 14650692 14650692 1 + G A LUSC 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTCAGAAGCCACACTTAAAGTTAGCACGCGTTCA < 41bp 1 0.466334057211973 1 0.285243362188339 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650692 synonymous SNV . 0 24 hm5C_associated_SNPs_29966 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:14650667-14650694
64251 chr14 102792497 102792497 1 + C T LUSC 102792493 + 102792473 102792513 41 GCCCTCAGCTGCTCAGGGTACAGCCGCTTGTGAGAACCGAG GCCCTCAGCTGCTCAGGGTACAGCTGCTTGTGAGAACCGAG < 41bp 1 0.43210486536754 1 0.20396813750267 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102792493 chr14:102792497 nonsynonymous SNV 0.076 3 25 hm5C_associated_SNPs_29967 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:102792490-102792535
64251 chr15 36989588 36989588 1 + C A LUSC 36989578 + 36989558 36989598 41 GACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTA GACTTGCTTCTAGAGAAAAACCTGTCCTTCATAGGTAAGTA < 41bp 1 0.11578866861956 1 0.0815106332302094 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989578 chr15:36989588 nonsynonymous SNV 0.994 1 31 hm5C_associated_SNPs_29968 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989588 36989588 1 + C A LUSC 36989579 + 36989559 36989599 41 ACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTAT ACTTGCTTCTAGAGAAAAACCTGTCCTTCATAGGTAAGTAT < 41bp 1 0.218320903312684 1 0.0462746620178223 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989579 chr15:36989588 nonsynonymous SNV 0.994 1 30 hm5C_associated_SNPs_29969 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989588 36989588 1 + C A LUSC 36989584 + 36989564 36989604 41 CTTCTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTC CTTCTAGAGAAAAACCTGTCCTTCATAGGTAAGTATTATTC < 41bp 1 0.439058818021973 1 0.454440534114838 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989584 chr15:36989588 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_29970 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr15 36989588 36989588 1 + C A LUSC 36989587 + 36989567 36989607 41 CTAGAGAAAAACCTGTCCTTCCTAGGTAAGTATTATTCACA CTAGAGAAAAACCTGTCCTTCATAGGTAAGTATTATTCACA < 41bp 1 0.238090786155318 1 0.103141605854034 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989587 chr15:36989588 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_29971 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:36989572-36989635
64251 chr1 44446880 44446880 1 + G A LUSC 44446876 + 44446856 44446896 41 GCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCTCTGCCTGC GCTGGAGCGCGTCTGCAAGGCTGTACTCCTTCTCTGCCTGC < 41bp 1 0.679042749286943 1 0.119991481304169 experiment 0.641914501426115 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446876 chr1:44446880 synonymous SNV . 0 25 hm5C_associated_SNPs_29972 0 0 12 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:44446840-44446880
64251 chr18 13059268 13059268 1 + G A LUSC 13059272 + 13059252 13059292 41 GCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGC GCAGAAGCTTTGGCCAACACCGTCACTCTCACTGCCATTGC < 41bp 1 0.579796081322083 1 0.235611915588379 experiment 0.840407837355834 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13059272 chr18:13059268 nonsynonymous SNV 0.027 3 17 hm5C_associated_SNPs_29973 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:13059268-13059285
64251 chr20 44571753 44571753 1 + G T LUSC 44571747 + 44571727 44571767 41 GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCGC GTCCTGCAGGCATTGAGCCTCCACGGTAGTCTTTCAACCGC < 41bp 1 0.417867379519939 1 0.55424177646637 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571747 chr20:44571753 stopgain 0.920 1 27 hm5C_associated_SNPs_29975 0 0 1 PPIG POSTAR2 ENCODE chr20:44571752-44571784
64251 chr7 100867103 100867103 1 + G T LUSC 100867120 + 100867100 100867140 41 TCTGGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGC TCTTGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGC < 41bp 1 0.673325306459883 1 0.641318142414093 experiment 0.653349387080234 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867120 chr7:100867103 synonymous SNV . 0 4 hm5C_associated_SNPs_29976 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:100867089-100867107
64251 chr7 100867103 100867103 1 + G T LUSC 100867121 + 100867101 100867141 41 CTGGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGCT CTTGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGCT < 41bp 1 0.744097809778629 1 0.403328537940979 experiment 0.511804380442742 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867121 chr7:100867103 synonymous SNV . 0 3 hm5C_associated_SNPs_29977 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:100867089-100867107
64251 chr12 125612718 125612718 1 + A G LUSC 125612714 + 125612694 125612734 41 CCATTGCTTGCAGGAGGCACCGACATCATCTCCTGCTTCAT CCATTGCTTGCAGGAGGCACCGACGTCATCTCCTGCTTCAT < 41bp 1 0.271232298492229 1 0.240666210651398 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AACS ENSG00000081760 CDS Human protein_coding chr12:125612714 chr12:125612718 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_29978 0 0 1 U2AF2 POSTAR2 ENCODE chr12:125612691-125612742
64251 chr13 111111180 111111180 1 + C A LUSC 111111171 + 111111151 111111191 41 ACGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAG ACGAAGCTATCAAAGGTCTTCCGGGACTGACAGGACCCAAG < 41bp 1 0.280299006615926 1 0.758420944213867 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111171 chr13:111111180 nonsynonymous SNV 0.840 4 30 hm5C_associated_SNPs_29979 0 0 1 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr13 111111180 111111180 1 + C A LUSC 111111172 + 111111152 111111192 41 CGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAGG CGAAGCTATCAAAGGTCTTCCGGGACTGACAGGACCCAAGG < 41bp 1 0.705803351945693 1 0.896597743034363 experiment 0.588393296108615 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111172 chr13:111111180 nonsynonymous SNV 0.840 4 29 hm5C_associated_SNPs_29980 0 0 1 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr6 15496763 15496763 1 + G T LUSC 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGTGCT < 41bp 1 0.0655683684961463 1 0.181064665317535 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496763 nonsynonymous SNV 1.000 5 38 hm5C_associated_SNPs_29981 0 0 19 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr6 15496763 15496763 1 + G T LUSC 15496765 + 15496745 15496785 41 GCCTGCAGCTGCGGGAGGGGCTGCGGAACTCCAAGAGGAGA GCCTGCAGCTGCGGGAGGTGCTGCGGAACTCCAAGAGGAGA < 41bp 1 0.704631284883048 1 0.457590103149414 experiment 0.590737430233904 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496765 chr6:15496763 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_29982 0 0 19 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr10 45486418 45486418 1 + C T LUSC 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGT < 41bp 1 0.0561417519764495 1 0.275027960538864 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486418 synonymous SNV . 0 41 hm5C_associated_SNPs_29983 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr7 94917904 94917904 1 + G T LUSC 94917917 + 94917897 94917937 41 CCGTTCAGGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA CCGTTCATGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA < 41bp 1 0.545384492530848 1 0.179074734449387 experiment 0.909231014938305 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917917 chr7:94917904 nonsynonymous SNV 0.281 0 8 hm5C_associated_SNPs_29984 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr5 6651984 6651984 1 + G C LUSC 6651967 + 6651947 6651987 41 TTCCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGGAGG TTCCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGCAGG < 41bp 1 0.247099087464026 1 0.137109309434891 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6651967 chr5:6651984 nonsynonymous SNV 0.862 1 38 hm5C_associated_SNPs_29985 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6651976-6652003
64251 chr5 6651984 6651984 1 + G C LUSC 6651968 + 6651948 6651988 41 TCCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGGAGGA TCCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGCAGGA < 41bp 1 0.0458020601177971 1 0.293656826019287 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6651968 chr5:6651984 nonsynonymous SNV 0.862 1 37 hm5C_associated_SNPs_29986 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6651976-6652003
64251 chr5 6651984 6651984 1 + G C LUSC 6651969 + 6651949 6651989 41 CCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGGAGGAA CCTAAGGTGCTTAATTTACCCATTTCTGATGCGAGCAGGAA < 41bp 1 0.0644733303902616 1 0.145225822925568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6651969 chr5:6651984 nonsynonymous SNV 0.862 1 36 hm5C_associated_SNPs_29987 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6651976-6652003
64251 chr1 218458684 218458684 1 + G T LUSC 218458666 + 218458646 218458686 41 CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACGTG CCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACTCACTTG < 41bp 1 0.337459569533826 1 0.402607381343842 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458666 chr1:218458684 nonsynonymous SNV 0.783 1 39 hm5C_associated_SNPs_29988 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr1:218458658-218458698
64251 chr11 65267905 65267905 1 + G A LUSC 65267898 + 65267878 65267918 41 CAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACA CAGAAGTGGATTCAGTGAATCTAGGAAAACAGCAGCAGACA < 41bp 1 0.775482705575489 1 0.483038514852524 experiment 0.449034588849023 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267898 chr11:65267905 . . 0 28 hm5C_associated_SNPs_29989 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65267905-65267934
64251 chr11 65267905 65267905 1 + G A LUSC 65267924 + 65267904 65267944 41 AGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGA AAACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGA < 41bp 1 0.648491687785533 1 0.826244592666626 experiment 0.703016624428934 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267924 chr11:65267905 . . 0 2 hm5C_associated_SNPs_29990 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65267905-65267934
64251 chr11 65268000 65268000 1 + G C LUSC 65268011 + 65267991 65268031 41 ATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGA ATAGGAAAACAGTCCAGGAGCCAGTGCGATTTGGTGAAGGA < 41bp 1 0.311400660115329 1 0.276459991931915 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268011 chr11:65268000 . . 0 10 hm5C_associated_SNPs_29991 0 0 90 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65268000 65268000 1 + G C LUSC 65268012 + 65267992 65268032 41 TAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAA TAGGAAAACAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAA < 41bp 1 0.355771876350157 1 0.33296012878418 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268012 chr11:65268000 . . 0 9 hm5C_associated_SNPs_29992 0 0 90 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr9 136216887 136216887 1 + G C LUSC 136216873 + 136216853 136216893 41 AAGGCTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACC AAGGCTGCTGGCAAAGGGGACGTCCCAACGAAGACACCACC < 41bp 1 0.128454258638051 1 0.333891749382019 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216873 chr9:136216887 nonsynonymous SNV 0.896 2 35 hm5C_associated_SNPs_29993 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216887 136216887 1 + G C LUSC 136216877 + 136216857 136216897 41 CTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTC CTGCTGGCAAAGGGGACGTCCCAACGAAGACACCACCTGTC < 41bp 1 0.175638395081607 1 0.14045512676239 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216877 chr9:136216887 nonsynonymous SNV 0.896 2 31 hm5C_associated_SNPs_29994 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216887 136216887 1 + G C LUSC 136216881 + 136216861 136216901 41 TGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTCCTTC TGGCAAAGGGGACGTCCCAACGAAGACACCACCTGTCCTTC < 41bp 1 0.789957479989185 1 0.826359450817108 experiment 0.42008504002163 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216881 chr9:136216887 nonsynonymous SNV 0.896 2 27 hm5C_associated_SNPs_29995 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr18 74631815 74631815 1 + G T LUSC 74631822 + 74631802 74631842 41 CACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCC CACTTTCACGGAGTAGGAGACAGCCCAGTTAGCCAAGATCC < 41bp 1 0.306732561463856 1 0.372455537319183 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631822 chr18:74631815 stopgain 0.998 1 14 hm5C_associated_SNPs_29996 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:74631797-74631824
64251 chr1 236711372 236711372 1 + G C LUSC 236711377 + 236711357 236711397 41 GGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCT GGCGTACACAGCCTGCAGTACAAACACAGATTTAAAGAGCT < 41bp 1 0.0659902580059509 1 0.116022676229477 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711377 chr1:236711372 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_29997 0 0 2 RPS3 POSTAR2 ENCODE chr1:236711321-236711387
64251 chr1 10328302 10328302 1 + C A LUSC 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATAATGAGAACAACCTTTCCACTGAGAAGGTAGG < 41bp 1 0.0031994542723983 1 0.0965732932090759 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328302 nonsynonymous SNV 0.858 2 17 hm5C_associated_SNPs_29998 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chr15 22993108 22993108 1 + G A LUSC 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGAAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA < 41bp 1 0.237977911652656 1 0.0632771551609039 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993108 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_30000 0 0 4 FMR1 POSTAR2 ENCODE chr15:22993082-22993142
64251 chr15 22993108 22993108 1 + G A LUSC 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGAAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG < 41bp 1 0.395440161520979 1 0.319447696208954 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993108 nonsynonymous SNV . 0 3 hm5C_associated_SNPs_30001 0 0 4 FMR1 POSTAR2 ENCODE chr15:22993082-22993142
64251 chr11 65273628 65273628 1 + C G LUSC 65273608 + 65273588 65273628 41 GATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTTC GATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTTG < 41bp 1 0.617647500243821 1 0.344736516475677 experiment 0.764704999512358 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;MASCRNA;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273608 chr11:65273628 . . 0 41 hm5C_associated_SNPs_30002 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr11:65273619-65273640
64251 chr1 28607288 28607288 1 + G A LUSC 28607298 + 28607278 28607318 41 TACGCCCTCCGTGCCATCACCCGCTACATGACCTGACTCCT TACGCCCTCCATGCCATCACCCGCTACATGACCTGACTCCT < 41bp 1 0.12629339729761 1 0.424368739128113 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28607298 chr1:28607288 nonsynonymous SNV 0.966 4 11 hm5C_associated_SNPs_30003 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:28607267-28607348
64251 chr2 46985754 46985754 1 + A T LUSC 46985774 + 46985754 46985794 41 AATGTGGACATGAACTCCAACAGATGTTTGTCTGTCAAAGA TATGTGGACATGAACTCCAACAGATGTTTGTCTGTCAAAGA < 41bp 1 0.411863457381309 1 0.19122377038002 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46985774 chr2:46985754 nonsynonymous SNV 0.749 1 1 hm5C_associated_SNPs_30004 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:46985754-46985769
64251 chr8 22106607 22106607 1 + C T LUSC 22106604 + 22106584 22106624 41 AAGAGGCCAAGATGAAGGCTCCTCCCAAAGCAGCCAGGAAG AAGAGGCCAAGATGAAGGCTCCTTCCAAAGCAGCCAGGAAG < 41bp 1 0.00791114605616628 1 0.085351288318634 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POLR3D ENSG00000168495 CDS Human protein_coding chr8:22106604 chr8:22106607 nonsynonymous SNV 0.933 0 24 hm5C_associated_SNPs_30005 0 0 12 BUD13 POSTAR2 ENCODE chr8:22106549-22106658
64251 chr1 76253248 76253248 1 + G T LUSC 76253245 + 76253225 76253265 41 ACACTTTGTTATTGGAGAAACATGCAGATTATATCGCATCC ACACTTTGTTATTGGAGAAACATTCAGATTATATCGCATCC < 41bp 1 0.0937155281289494 1 0.126538038253784 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76253245 chr1:76253248 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_30006 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:76253074-76253815
64251 chr12 132464247 132464247 1 + C A LUSC 132464239 + 132464219 132464259 41 TTTTTCATCTTTTTTCCCAGCAGCAAGCCCTCGCAGGGAGC TTTTTCATCTTTTTTCCCAGCAGCAAGCACTCGCAGGGAGC < 41bp 1 0.22992883023013 1 0.241592735052109 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132464239 chr12:132464247 synonymous SNV . 0 29 hm5C_associated_SNPs_30007 0 0 18 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:132464247-132464248
64251 chr12 95868045 95868045 1 + G T LUSC 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACTGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA < 41bp 1 0.281997608072049 1 0.510487496852875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868045 synonymous SNV . 0 7 hm5C_associated_SNPs_30009 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr11 65826308 65826308 1 + G C LUSC 65826306 + 65826286 65826326 41 TCCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAACCGAAA TCCTCCTCTTGACAGAAAAACCCGAAGCGTAGGAACCGAAA < 41bp 1 0.564129386269907 1 0.457736670970917 experiment 0.871741227460185 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826306 chr11:65826308 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_30010 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:65826287-65826308
64251 chr11 65826308 65826308 1 + G C LUSC 65826307 + 65826287 65826327 41 CCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAACCGAAAG CCTCCTCTTGACAGAAAAACCCGAAGCGTAGGAACCGAAAG < 41bp 1 0.61105125559943 1 0.377191841602325 experiment 0.77789748880114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826307 chr11:65826308 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_30011 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:65826287-65826308
64251 chr19 49377535 49377535 1 + G T LUSC 49377526 + 49377506 49377546 41 TGAAGGCCTGGGTGTATTGGCCAGGAGAGGACACAGAGGAA TGAAGGCCTGGGTGTATTGGCCAGGAGAGTACACAGAGGAA < 41bp 1 0.480343806246644 1 0.727189660072327 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377526 chr19:49377535 nonsynonymous SNV 0.962 4 30 hm5C_associated_SNPs_30012 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:49377519-49377539
64251 chr17 35307618 35307618 1 + G C LUSC 35307610 + 35307590 35307630 41 TAGAAAACTGGCATCAGCCTCCCTCTTGGACACGGACAAAA TAGAAAACTGGCATCAGCCTCCCTCTTGCACACGGACAAAA < 41bp 1 0.0666448355761352 1 0.0796939730644226 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AATF ENSG00000108270 CDS Human other chr17:35307610 chr17:35307618 nonsynonymous SNV 0.999 3 29 hm5C_associated_SNPs_30020 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35307584-35307626
64251 chr17 35307618 35307618 1 + G C LUSC 35307611 + 35307591 35307631 41 AGAAAACTGGCATCAGCCTCCCTCTTGGACACGGACAAAAG AGAAAACTGGCATCAGCCTCCCTCTTGCACACGGACAAAAG < 41bp 1 0.0616189432469465 1 0.060973733663559 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AATF ENSG00000108270 CDS Human other chr17:35307611 chr17:35307618 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_30021 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35307584-35307626
64251 chr17 35307618 35307618 1 + G C LUSC 35307612 + 35307592 35307632 41 GAAAACTGGCATCAGCCTCCCTCTTGGACACGGACAAAAGG GAAAACTGGCATCAGCCTCCCTCTTGCACACGGACAAAAGG < 41bp 1 0.136296561463245 1 0.105169534683228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AATF ENSG00000108270 CDS Human other chr17:35307612 chr17:35307618 nonsynonymous SNV 0.999 3 27 hm5C_associated_SNPs_30022 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35307584-35307626
64251 chr17 35307618 35307618 1 + G C LUSC 35307614 + 35307594 35307634 41 AAACTGGCATCAGCCTCCCTCTTGGACACGGACAAAAGGTA AAACTGGCATCAGCCTCCCTCTTGCACACGGACAAAAGGTA < 41bp 1 0.089642690184132 1 0.449187278747559 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AATF ENSG00000108270 CDS Human other chr17:35307614 chr17:35307618 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_30023 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35307584-35307626
64251 chr21 45560138 45560138 1 + G A LUSC 45560135 + 45560115 45560155 41 CTTTTGTCTCCCGGTAGGAGCACGTTTGCCGTGGACGGGAA CTTTTGTCTCCCGGTAGGAGCACATTTGCCGTGGACGGGAA < 41bp 1 0.336136930561073 1 0.150154560804367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560135 chr21:45560138 synonymous SNV . 0 24 hm5C_associated_SNPs_30024 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:45560131-45560153
64251 chr17 30692393 30692393 1 + C G LUSC 30692381 + 30692361 30692401 41 CTGTTCCACGTCCTGGAATTCCTCCAATGACTCAAGCACAG CTGTTCCACGTCCTGGAATTCCTCCAATGACTGAAGCACAG < 41bp 1 0.125268942460601 1 0.422957301139832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692381 chr17:30692393 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_30026 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:30692384-30692411
64251 chr16 1793359 1793359 1 + A T LUSC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGATCGTGTTCCCCCTGGCTGACGGCACGGTACG < 41bp 1 0.175580983868428 1 0.0924326777458191 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793359 nonsynonymous SNV 0.988 2 11 hm5C_associated_SNPs_30028 0 0 8 DDX24 POSTAR2 ENCODE chr16:1793335-1793371
64251 chrX 73046073 73046073 1 - C A LUSC 73046069 - 73046049 73046089 41 GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATGTGAAGA GGAAAAAAAAGTGCCATGCTCTCTAGAGAAAAATGTGAAGA < 41bp 1 0.300835902111627 1 0.812818765640259 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046069 chrX:73046073 . . 0 17 hm5C_associated_SNPs_30030 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046073 73046073 1 - C A LUSC 73046075 - 73046055 73046095 41 TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATG TGTTGGGGAAAAAAAAGTGCCATGCTCTCTAGAGAAAAATG < 41bp 1 0.079236665546873 1 0.0560686588287354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046075 chrX:73046073 . . 0 23 hm5C_associated_SNPs_30031 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046073 73046073 1 - C A LUSC 73046076 - 73046056 73046096 41 TTGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAAT TTGTTGGGGAAAAAAAAGTGCCATGCTCTCTAGAGAAAAAT < 41bp 1 0.0312786087530922 1 0.0722248554229736 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046076 chrX:73046073 . . 0 24 hm5C_associated_SNPs_30032 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr16 28970404 28970404 1 + G A LUSC 28970409 + 28970389 28970429 41 AAACACCAGACACTGGAAGTCTCACTGTCTCGAGTGAGTGG AAACACCAGACACTGAAAGTCTCACTGTCTCGAGTGAGTGG < 41bp 1 0.324991872980054 1 0.164956897497177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28970409 chr16:28970404 nonsynonymous SNV 0.968 1 16 hm5C_associated_SNPs_30033 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:28970402-28970424
64251 chr9 116269689 116269689 1 + C T LUSC 116269708 + 116269688 116269728 41 CCCAACAAACGGGAGAAGAACTGCACCCATGGGGTCCAGGC CTCAACAAACGGGAGAAGAACTGCACCCATGGGGTCCAGGC < 41bp 1 0.761679299054736 1 0.39610230922699 experiment 0.476641401890529 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RGS3 ENSG00000138835 CDS Human protein_coding chr9:116269708 chr9:116269689 nonsynonymous SNV 0.994 4 2 hm5C_associated_SNPs_30034 0 0 1 GRWD1 POSTAR2 ENCODE chr9:116269594-116269747
64251 chr7 44099195 44099195 1 + G A LUSC 44099175 + 44099155 44099195 41 GGAGCCGGCGCCCAGCACTCCTCCATGTCTGGTGCAGGCAG GGAGCCGGCGCCCAGCACTCCTCCATGTCTGGTGCAGGCAA < 41bp 1 0.772019908215284 1 0.980140089988708 experiment 0.455960183569433 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44099175 chr7:44099195 nonsynonymous SNV 0.892 0 41 hm5C_associated_SNPs_30035 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44099179-44099215
64251 chr12 52370296 52370296 1 + C G LUSC 52370279 + 52370259 52370299 41 GAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCT GAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTGTCT < 41bp 1 0.243325760653133 1 0.641049683094025 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52370279 chr12:52370296 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_30037 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:52370274-52370307
64251 chr6 80816585 80816585 1 + G T LUSC 80816605 + 80816585 80816625 41 GATCCGGAGCCCCGGGAGTACGGTGAGCCCTGGGACTGCCC TATCCGGAGCCCCGGGAGTACGGTGAGCCCTGGGACTGCCC < 41bp 1 0.793504188097281 1 0.451430946588516 experiment 0.412991623805439 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80816605 chr6:80816585 nonsynonymous SNV 0.080 2 1 hm5C_associated_SNPs_30039 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:80816554-80816585
64251 chr19 14040228 14040228 1 + G A LUSC 14040234 + 14040214 14040254 41 CTCAGTGTGCTGGCGTTTGACCAAGAGCGTCTGGAGCGGAA CTCAGTGTGCTGGCATTTGACCAAGAGCGTCTGGAGCGGAA < 41bp 1 0.40016227514314 1 0.523492276668549 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14040234 chr19:14040228 synonymous SNV . 0 15 hm5C_associated_SNPs_30041 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:14040220-14040240
64251 chr14 58698807 58698807 1 + A T LUSC 58698787 + 58698767 58698807 41 TTTCTTTTTAATAACAGTGTCCGATAGACACCAGGAAGCAA TTTCTTTTTAATAACAGTGTCCGATAGACACCAGGAAGCAT < 41bp 1 0.124932627542242 1 0.0842564404010773 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58698787 chr14:58698807 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_30042 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr14:58698789-58698816
64251 chr6 84629158 84629158 1 + A G LUSC 84629154 + 84629134 84629174 41 AGACTCTTTAGTCACCATTGCCATATATACTAAACAGAAGG AGACTCTTTAGTCACCATTGCCATGTATACTAAACAGAAGG < 41bp 1 0.0538000758415761 1 0.403558313846588 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYB5R4 ENSG00000065615 CDS Human protein_coding chr6:84629154 chr6:84629158 nonsynonymous SNV 0.980 2 25 hm5C_associated_SNPs_30044 0 0 1 DDX24 POSTAR2 ENCODE chr6:84629121-84629177
64251 chr22 40660725 40660725 1 + A G LUSC 40660713 + 40660693 40660733 41 CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTATGCAAATT CTCAACCCTTGGAGGTGCTGCTGCTTCAAATTGTGCAAATT < 41bp 1 0.0833771770906425 1 0.0514258146286011 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40660713 chr22:40660725 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_30049 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:40660720-40660740
64251 chr20 35219442 35219442 1 + G T LUSC 35219435 + 35219415 35219455 41 AAGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTC AAGGCCTCAGATGTGGCCCTCCCCCGTTGCAGCAGCCCCTC < 41bp 1 0.166345278691684 1 0.0641975402832031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219435 chr20:35219442 nonsynonymous SNV 0.997 0 28 hm5C_associated_SNPs_30060 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr20 35219442 35219442 1 + G T LUSC 35219436 + 35219416 35219456 41 AGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTCA AGGCCTCAGATGTGGCCCTCCCCCGTTGCAGCAGCCCCTCA < 41bp 1 0.382502680778238 1 0.398815095424652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219436 chr20:35219442 nonsynonymous SNV 0.997 0 27 hm5C_associated_SNPs_30061 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr22 50882466 50882466 1 + G A LUSC 50882453 + 50882433 50882473 41 ACCCACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCGGTCC ACCCACCCCAGCAGTCTCTTCTGCACTGGCCGTAGCGGTCC < 41bp 1 0.769731528482063 1 0.87900710105896 experiment 0.460536943035873 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882453 chr22:50882466 synonymous SNV . 0 34 hm5C_associated_SNPs_30062 0 0 2 FMR1 POSTAR2 ENCODE chr22:50882460-50882525
64251 chr22 50882466 50882466 1 + G A LUSC 50882468 + 50882448 50882488 41 CTCTTCTGCACTGGCCGTGGCGGTCCCCCTAGGGCCCATCA CTCTTCTGCACTGGCCGTAGCGGTCCCCCTAGGGCCCATCA < 41bp 1 0.266030351983998 1 0.375464290380478 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50882468 chr22:50882466 synonymous SNV . 0 19 hm5C_associated_SNPs_30063 0 0 2 FMR1 POSTAR2 ENCODE chr22:50882460-50882525
64251 chr7 101837153 101837153 1 + G A LUSC 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGCACCGTCCAAGGGCGCTGGGACA < 41bp 1 0.0197239484229832 1 0.388153910636902 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837153 nonsynonymous SNV 0.725 2 27 hm5C_associated_SNPs_30064 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 101837153 101837153 1 + G A LUSC 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGCACCGTCCAAGGGCGCTGGGACAC < 41bp 1 0.0650381216391876 1 0.481105208396912 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837153 nonsynonymous SNV 0.725 2 26 hm5C_associated_SNPs_30065 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chrX 123224561 123224561 1 + C T LUSC 123224558 + 123224538 123224578 41 AGATTACGGCCTGAGGATAGCTTCATGAGTGTTTATCCAAT AGATTACGGCCTGAGGATAGCTTTATGAGTGTTTATCCAAT < 41bp 1 0.269743452542122 1 0.0715199708938599 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123224558 chrX:123224561 synonymous SNV . 0 24 hm5C_associated_SNPs_30066 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:123224523-123224589
64251 chr20 42169587 42169587 1 + G C LUSC 42169585 + 42169565 42169605 41 CCCCACCAGGCAAGAATAGTCAGAGTGACCCATGTATCTGG CCCCACCAGGCAAGAATAGTCACAGTGACCCATGTATCTGG < 41bp 1 0.628901077022689 1 0.66681706905365 experiment 0.742197845954621 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control L3MBTL1 ENSG00000185513 CDS Human protein_coding chr20:42169585 chr20:42169587 nonsynonymous SNV 0.160 0 23 hm5C_associated_SNPs_30067 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:42169585-42169615
64251 chr16 601555 601555 1 + G A LUSC 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACAGCAGC < 41bp 1 0.0250076417561774 1 0.0636005997657776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601555 nonsynonymous SNV 0.987 5 36 hm5C_associated_SNPs_30068 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr16 601555 601555 1 + G A LUSC 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACCCGTGGGGCCGTTTCTCCTGGAACAGCAGCTGGTCCG < 41bp 1 0.461297776270409 1 0.928219199180603 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601555 nonsynonymous SNV 0.987 5 29 hm5C_associated_SNPs_30069 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:601540-601560
64251 chr22 42042981 42042981 1 + A C LUSC 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAAGCCTCCTCCCATAAAGCTCTATCGG < 41bp 1 0.0840077204783094 1 0.197765409946442 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042981 synonymous SNV . 0 26 hm5C_associated_SNPs_30070 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:42042960-42043000
64251 chr8 77619827 77619827 1 + A T LUSC 77619825 + 77619805 77619845 41 TCCGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC TCCGGCTTGCCAGTGGTCAGCTTATGGGTGATGACCTGTCC < 41bp 1 0.105811713623167 1 0.0982119739055634 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77619825 chr8:77619827 synonymous SNV . 0 23 hm5C_associated_SNPs_30071 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:77619801-77619830
64251 chr12 100732613 100732613 1 + A G LUSC 100732627 + 100732607 100732647 41 ACTTCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAG ACTTCAGTGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAG < 41bp 1 0.191148127110263 1 0.124571114778519 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732627 chr12:100732613 nonsynonymous SNV 0.805 0 7 hm5C_associated_SNPs_30072 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr12:100732586-100732615
64251 chr12 100732613 100732613 1 + A G LUSC 100732630 + 100732610 100732650 41 TCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACC TCAGTGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACC < 41bp 1 0.181581817630512 1 0.231181681156158 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732630 chr12:100732613 nonsynonymous SNV 0.805 0 4 hm5C_associated_SNPs_30073 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr12:100732586-100732615
64251 chr12 100732613 100732613 1 + A G LUSC 100732631 + 100732611 100732651 41 CAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACCC CAGTGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACCC < 41bp 1 0.656351502646988 1 0.427645266056061 experiment 0.687296994706023 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732631 chr12:100732613 nonsynonymous SNV 0.805 0 3 hm5C_associated_SNPs_30074 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr12:100732586-100732615
64251 chr22 39078929 39078929 1 + C G LUSC 39078940 + 39078920 39078960 41 CTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGA CTTTATGATGCTGGTTCTTCCCGTTGTCTTTGAGACGGAGA < 41bp 1 0.298018743355741 1 0.137838870286942 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078940 chr22:39078929 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_30075 0 0 17 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:39078920-39078940
64251 chr3 158519922 158519922 1 + C G LUSC 158519940 + 158519920 158519960 41 CTCTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG CTGTCCGTCTCCTGCGGGCGCAATGGAGGAGGAGGATGAGG < 41bp 1 0.474803138263323 1 0.427799016237259 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519940 chr3:158519922 nonsynonymous SNV 0.001 0 3 hm5C_associated_SNPs_30076 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr3 39431976 39431976 1 + G T LUSC 39431995 + 39431975 39432015 41 GGCCTTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG GTCCTTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG < 41bp 1 0.281440385781648 1 0.11727699637413 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431995 chr3:39431976 nonsynonymous SNV 0.996 5 2 hm5C_associated_SNPs_30077 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:39431944-39431979
64251 chr1 154947241 154947241 1 + A G LUSC 154947230 + 154947210 154947250 41 AACCGAGCGATCATGTCGCACAAACAAATTTACTATTCGGA AACCGAGCGATCATGTCGCACAAACAAATTTGCTATTCGGA < 41bp 1 0.0905730069349028 1 0.128744810819626 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS1B ENSG00000173207 CDS Human protein_coding chr1:154947230 chr1:154947241 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_30079 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154947220-154947255
64251 chr2 74154148 74154148 1 + G T LUSC 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCACGCGGGGCGCGGTCCCCGAAGGCTCTCCATCGAA < 41bp 1 0.745472061050233 1 0.259287863969803 experiment 0.509055877899535 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154148 synonymous SNV . 0 20 hm5C_associated_SNPs_30082 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr20 2635176 2635176 1 + G C LUSC 2635157 + 2635137 2635177 41 GGGGATCCCAAGATTGGTGCCGCAATACAGGAGGAGTTAGG GGGGATCCCAAGATTGGTGCCGCAATACAGGAGGAGTTACG < 41bp 1 0.570498156866297 1 0.331920742988586 experiment 0.859003686267406 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635157 chr20:2635176 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_30083 0 0 20 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:2635158-2635190
64251 chr20 2635176 2635176 1 + G C LUSC 2635184 + 2635164 2635204 41 CAGGAGGAGTTAGGGTACAACTGCCAGACTGGAGGAGTCAT CAGGAGGAGTTACGGTACAACTGCCAGACTGGAGGAGTCAT < 41bp 1 0.411798929874402 1 0.105524927377701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635184 chr20:2635176 nonsynonymous SNV 0.999 2 13 hm5C_associated_SNPs_30084 0 0 20 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:2635158-2635190
64251 chr12 863246 863246 1 + T A LUSC 863266 + 863246 863286 41 TGGGGAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGC AGGGGAGCAAAGAGGAGCCGCCGCCGGCGAGAAGTGGCAGC < 41bp 1 0.111333019185567 1 0.23948061466217 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:863266 chr12:863246 nonsynonymous SNV 0.678 0 1 hm5C_associated_SNPs_30085 0 0 2 EIF3H POSTAR2 ENCODE chr12:863221-863311
64251 chr14 21553028 21553028 1 + G T LUSC 21553017 + 21552997 21553037 41 TTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGGC TTCTCTTCGAGCATCTCCTCCTGTTCAGCAATCTCAAGGGC < 41bp 1 0.130319655435112 1 0.13311642408371 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21553017 chr14:21553028 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_30086 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:21553026-21553055
64251 chr14 21553029 21553029 1 + C A LUSC 21553017 + 21552997 21553037 41 TTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGCTCAAGGGC TTCTCTTCGAGCATCTCCTCCTGTTCAGCAAGATCAAGGGC < 41bp 1 0.106198768060533 1 0.134794294834137 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21553017 chr14:21553029 nonsynonymous SNV 0.999 0 33 hm5C_associated_SNPs_30087 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:21553026-21553055
64251 chr12 62931458 62931458 1 + C A LUSC 62931443 + 62931423 62931463 41 CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATAATGGC < 41bp 1 0.12968318831979 1 0.0507639944553375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62931443 chr12:62931458 stopgain 0.997 1 36 hm5C_associated_SNPs_30088 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:62931453-62931474
64251 chr4 5733346 5733346 1 + C A LUSC 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCCGCACCTTCCTACGGGTGAACGCCTTCCC < 41bp 1 0.0343286881840291 1 0.168559163808823 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733346 synonymous SNV . 0 24 hm5C_associated_SNPs_30089 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr17 35310518 35310518 1 + G T LUSC 35310535 + 35310515 35310555 41 GATGATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTC GATTATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTC < 41bp 1 0.2565810474511 1 0.079436331987381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control AATF ENSG00000108270 CDS Human other chr17:35310535 chr17:35310518 nonsynonymous SNV 0.225 3 4 hm5C_associated_SNPs_30091 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35310385-35310540
64251 chr17 35310518 35310518 1 + G T LUSC 35310538 + 35310518 35310558 41 GATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTCTGA TATGGTGTGGTGATGACCTTCTCTAGTGTCAAAGTTTCTGA < 41bp 1 0.704268447055228 1 0.880374431610107 experiment 0.591463105889543 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AATF ENSG00000108270 CDS Human other chr17:35310538 chr17:35310518 nonsynonymous SNV 0.225 3 1 hm5C_associated_SNPs_30092 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35310385-35310540
64251 chr17 21731036 21731036 1 + C A LUSC 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCACCCCGACCAGCAGAGGCTCATCTT < 41bp 1 0.309045128666321 1 0.437979251146317 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731036 nonsynonymous SNV 0.555 1 17 hm5C_associated_SNPs_30093 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr1 183101650 183101650 1 + G A LUSC 183101642 + 183101622 183101662 41 ACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGC ACTGGCAGGAGAAAATCAAACAGCATTTAAGATTGAAGAGC < 41bp 1 0.719283119974723 1 0.581237196922302 experiment 0.561433760050554 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101642 chr1:183101650 nonsynonymous SNV 0.998 1 29 hm5C_associated_SNPs_30094 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183101638-183101668
64251 chr1 183101650 183101650 1 + G A LUSC 183101645 + 183101625 183101665 41 GGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTA GGCAGGAGAAAATCAAACAGCATTTAAGATTGAAGAGCTTA < 41bp 1 0.0197384850546173 1 0.117018401622772 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101645 chr1:183101650 nonsynonymous SNV 0.998 1 26 hm5C_associated_SNPs_30095 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183101638-183101668
64251 chr14 64990087 64990087 1 + G A LUSC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGAGCGTCAGTTGCAACTGCACAATGATATGCACAAAGGC < 41bp 1 0.636555537515183 1 0.591628432273865 experiment 0.726888924969634 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990087 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_30096 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:64990067-64990094
64251 chr22 42262852 42262852 1 + A G LUSC 42262872 + 42262852 42262892 41 AGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACA GGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACA < 41bp 1 0.0918231842026682 1 0.259680479764938 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42262872 chr22:42262852 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_30097 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:42262836-42262866
64251 chr1 110466216 110466216 1 + C T LUSC 110466215 + 110466195 110466235 41 CCCCAAGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGG CCCCAAGGGACAGAGCTTTCCTCCTCCAGGCCAGGAGGGGG < 41bp 1 0.371737464223384 1 0.555439591407776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466215 chr1:110466216 nonsynonymous SNV 0.131 0 22 hm5C_associated_SNPs_30098 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr1 110466216 110466216 1 + C T LUSC 110466220 + 110466200 110466240 41 AGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGCAGCA AGGGACAGAGCTTTCCTCCTCCAGGCCAGGAGGGGGCAGCA < 41bp 1 0.368587929444461 1 0.904610216617584 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466220 chr1:110466216 nonsynonymous SNV 0.131 0 17 hm5C_associated_SNPs_30099 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr1 110466216 110466216 1 + C T LUSC 110466221 + 110466201 110466241 41 GGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGCAGCAT GGGACAGAGCTTTCCTCCTCCAGGCCAGGAGGGGGCAGCAT < 41bp 1 0.457891750056424 1 0.932490587234497 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466221 chr1:110466216 nonsynonymous SNV 0.131 0 16 hm5C_associated_SNPs_30100 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr12 3047309 3047309 1 + G A LUSC 3047297 + 3047277 3047317 41 CAGAACCATGACAGTTTGCTCTCAAGGTGGCAGAACAGAAC CAGAACCATGACAGTTTGCTCTCAAGGTGGCAAAACAGAAC < 41bp 1 0.57112218867544 1 0.699701488018036 experiment 0.85775562264912 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TULP3 ENSG00000078246 CDS Human protein_coding chr12:3047297 chr12:3047309 synonymous SNV . 0 33 hm5C_associated_SNPs_30102 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:3047288-3047312
64251 chr3 179478921 179478921 1 + C T LUSC 179478903 + 179478883 179478923 41 CCTGTTGTGCTCTGTAGCATCAGACATCGATGAGTCATCAG CCTGTTGTGCTCTGTAGCATCAGACATCGATGAGTCATTAG < 41bp 1 0.293018132816359 1 0.548521280288696 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179478903 chr3:179478921 nonsynonymous SNV 0.842 1 39 hm5C_associated_SNPs_30103 0 0 1 BUD13 POSTAR2 ENCODE chr3:179478858-179478936
64251 chr13 28752068 28752068 1 + G T LUSC 28752051 + 28752031 28752071 41 TTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAA TTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACTAAA < 41bp 1 0.554163887159756 1 0.150904089212418 experiment 0.891672225680488 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752051 chr13:28752068 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_30104 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752068 28752068 1 + G T LUSC 28752054 + 28752034 28752074 41 AATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGT AATGACTTTGGTGCCCTCAACATCTCTCAGAGACTAAAGGT < 41bp 1 0.133713520370696 1 0.223930299282074 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752054 chr13:28752068 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_30105 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752068 28752068 1 + G T LUSC 28752057 + 28752037 28752077 41 GACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGG GACTTTGGTGCCCTCAACATCTCTCAGAGACTAAAGGTAGG < 41bp 1 0.137799040017269 1 0.265989243984222 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752057 chr13:28752068 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_30106 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752068 28752068 1 + G T LUSC 28752059 + 28752039 28752079 41 CTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTG CTTTGGTGCCCTCAACATCTCTCAGAGACTAAAGGTAGGTG < 41bp 1 0.47368409519063 1 0.117829352617264 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752059 chr13:28752068 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_30107 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752068 28752068 1 + G T LUSC 28752061 + 28752041 28752081 41 TTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTGAA TTGGTGCCCTCAACATCTCTCAGAGACTAAAGGTAGGTGAA < 41bp 1 0.441966755753525 1 0.694764614105225 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752061 chr13:28752068 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_30108 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr22 51143493 51143493 1 + G T LUSC 51143513 + 51143493 51143533 41 GAAGCCAGAAGAGGACGGGGCTCGGCGCAGAGGTGAGGGGT TAAGCCAGAAGAGGACGGGGCTCGGCGCAGAGGTGAGGGGT < 41bp 1 0.272800669321574 1 0.713770389556885 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51143513 chr22:51143493 nonsynonymous SNV . 0 1 hm5C_associated_SNPs_30114 0 0 5 BUD13 POSTAR2 ENCODE chr22:51143448-51143535
64251 chr12 52379132 52379132 1 + G T LUSC 52379127 + 52379107 52379147 41 CCGAATCAGAGGGTGGGGACCAAACGGTAGGAGGGCCTGGG CCGAATCAGAGGGTGGGGACCAAACTGTAGGAGGGCCTGGG < 41bp 1 0.246528429300564 1 0.379218012094498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52379127 chr12:52379132 nonsynonymous SNV 0.996 4 26 hm5C_associated_SNPs_30115 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:52379113-52379142
64251 chr14 23239049 23239049 1 + G C LUSC 23239030 + 23239010 23239050 41 TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCACC < 41bp 1 0.297524261994005 1 0.0249118804931641 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239030 chr14:23239049 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_30116 0 0 1 IGF2BP3 POSTAR2 ENCODE chr14:23239028-23239126
64251 chr1 110466223 110466223 1 + G T LUSC 110466215 + 110466195 110466235 41 CCCCAAGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGG CCCCAAGGGACAGAGCTTTCCCCCTCCATGCCAGGAGGGGG < 41bp 1 0.153993936719179 1 0.136896997690201 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466215 chr1:110466223 nonsynonymous SNV 0.180 1 29 hm5C_associated_SNPs_30117 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr1 110466223 110466223 1 + G T LUSC 110466216 + 110466196 110466236 41 CCCAAGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGC CCCAAGGGACAGAGCTTTCCCCCTCCATGCCAGGAGGGGGC < 41bp 1 0.0862429202986393 1 0.179525882005692 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466216 chr1:110466223 nonsynonymous SNV 0.180 1 28 hm5C_associated_SNPs_30118 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr1 110466223 110466223 1 + G T LUSC 110466220 + 110466200 110466240 41 AGGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGCAGCA AGGGACAGAGCTTTCCCCCTCCATGCCAGGAGGGGGCAGCA < 41bp 1 0.0811506910614126 1 0.711886882781982 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466220 chr1:110466223 nonsynonymous SNV 0.180 1 24 hm5C_associated_SNPs_30119 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chr1 110466223 110466223 1 + G T LUSC 110466221 + 110466201 110466241 41 GGGACAGAGCTTTCCCCCTCCAGGCCAGGAGGGGGCAGCAT GGGACAGAGCTTTCCCCCTCCATGCCAGGAGGGGGCAGCAT < 41bp 1 0.153147028343679 1 0.59412693977356 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110466221 chr1:110466223 nonsynonymous SNV 0.180 1 23 hm5C_associated_SNPs_30120 0 0 2 SND1 POSTAR2 ENCODE chr1:110466210-110466248
64251 chrX 73046973 73046973 1 - T C LUSC 73046971 - 73046951 73046991 41 GACTGCAGTAAAACCCAGAACTCAAGTAGGGCAGAAGGTGG GACTGCAGTAAAACCCAGGACTCAAGTAGGGCAGAAGGTGG < 41bp 1 0.495545838746833 1 0.72087836265564 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046971 chrX:73046973 . . 0 19 hm5C_associated_SNPs_30121 0 0 71 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 47101575 47101575 1 + G T LUSC 47101578 + 47101558 47101598 41 CAAGTCCACGCTGGTGTGCCCCGATTGTGGCAATGTATCTG CAAGTCCACGCTGGTGTTCCCCGATTGTGGCAATGTATCTG < 41bp 1 0.196858524106626 1 0.158724397420883 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47101578 chrX:47101575 nonsynonymous SNV 0.979 4 18 hm5C_associated_SNPs_30125 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47101559-47101588
64251 chr16 68390996 68390996 1 + T A LUSC 68390977 + 68390957 68390997 41 GGGGGCTGCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTA GGGGGCTGCTGCTGGAACCCCCACTGCAAGCAGGCCGTCAA < 41bp 1 0.222707480550984 1 0.404758721590042 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390977 chr16:68390996 nonsynonymous SNV 0.983 4 40 hm5C_associated_SNPs_30126 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:68390980-68391000
64251 chr16 68390996 68390996 1 + T A LUSC 68391008 + 68390988 68391028 41 AGGCCGTCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCA AGGCCGTCAACTTCTTCAGCCCTGCCCCAGATCCCAGAGCA < 41bp 1 0.069617018036553 1 0.0770450532436371 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68391008 chr16:68390996 nonsynonymous SNV 0.983 4 9 hm5C_associated_SNPs_30127 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:68390980-68391000
64251 chr17 28499605 28499605 1 + G T LUSC 28499607 + 28499587 28499627 41 GAAGCTGCTAAGAAGCAGGCCATGAAACAGGTAAGGTAGAA GAAGCTGCTAAGAAGCAGTCCATGAAACAGGTAAGGTAGAA < 41bp 1 0.547199383721512 1 0.0973784923553467 experiment 0.905601232556975 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28499607 chr17:28499605 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_30128 0 0 2 BUD13 POSTAR2 ENCODE chr17:28499554-28499631
64251 chr14 23778052 23778052 1 + G T LUSC 23778051 + 23778031 23778071 41 TTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGCGCG TTCACAGCTCTATACGGGGACTGGGCCCTGGAGGAGGCGCG < 41bp 1 0.583641789657754 1 0.14218533039093 experiment 0.832716420684493 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCL2L2 ENSG00000129473 CDS Human protein_coding chr14:23778051 chr14:23778052 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_30129 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:23778038-23778060
64251 chr16 2816018 2816018 1 + G A LUSC 2816031 + 2816011 2816051 41 CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG CAGGAAAATTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG < 41bp 1 0.111919245099891 1 0.206553637981415 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816031 chr16:2816018 nonsynonymous SNV 0.998 1 8 hm5C_associated_SNPs_30131 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2815980-2816020
64251 chr5 122154695 122154695 1 + A G LUSC 122154694 + 122154674 122154714 41 TCAGAACTACTTAGTGACTACATTCGTCTTATTGCTGCAGT TCAGAACTACTTAGTGACTACGTTCGTCTTATTGCTGCAGT < 41bp 1 0.0596901013030074 1 0.0614858269691467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122154694 chr5:122154695 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_30132 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:122154666-122154702
64251 chr2 190531717 190531717 1 + A T LUSC 190531711 + 190531691 190531731 41 ACATGAAGGAAGTAATTCAGCAGTTCATTGATGTCCTGAGT ACATGAAGGAAGTAATTCAGCAGTTCTTTGATGTCCTGAGT < 41bp 1 0.439932476137755 1 0.268032491207123 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531711 chr2:190531717 nonsynonymous SNV 0.917 3 27 hm5C_associated_SNPs_30138 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190531441-190531835
64251 chr16 845779 845779 1 + T C LUSC 845778 + 845758 845798 41 GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC GCCGGGCCACGCCCCAGGCCCCGCTCCTCGATGCCCTCTGC < 41bp 1 0.200845013837425 1 0.107569813728333 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845778 chr16:845779 nonsynonymous SNV 0.013 4 22 hm5C_associated_SNPs_30139 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:845748-845787
64251 chr7 106768716 106768716 1 + C A LUSC 106768707 + 106768687 106768727 41 AATAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGTTTAA AATAGGTTGCAAGAGGCTTGCAAAGACATACTGCTGTTTAA < 41bp 1 0.482717831020411 1 0.61196106672287 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106768707 chr7:106768716 synonymous SNV . 0 30 hm5C_associated_SNPs_30140 0 0 1 LIN28B POSTAR2 ENCODE chr7:106768659-106768724
64251 chr18 33289685 33289685 1 + G A LUSC 33289684 + 33289664 33289704 41 TTAGAGACTGCAATGGAAGTCGGTCCCAGCAGTGGCTTCTT TTAGAGACTGCAATGGAAGTCAGTCCCAGCAGTGGCTTCTT < 41bp 1 0.372543505597446 1 0.346643209457397 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33289684 chr18:33289685 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_30141 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:33289662-33289706
64251 chr3 127323794 127323794 1 + G A LUSC 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GAGCGAGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT < 41bp 1 0.660925362373379 1 0.614526689052582 experiment 0.678149275253243 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323794 synonymous SNV . 0 6 hm5C_associated_SNPs_30143 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127323776-127323800
64251 chr16 30990977 30990977 1 + G T LUSC 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCGGACGAGGCCGAGCGCCCTAGTCCCCTGCT < 41bp 1 0.325409421054835 1 0.682577610015869 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990977 nonsynonymous SNV 0.178 1 33 hm5C_associated_SNPs_30145 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:30990952-30990990
64251 chr3 50005961 50005961 1 + A G LUSC 50005946 + 50005926 50005966 41 CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGT CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGGTAAGT < 41bp 1 0.0886637739870157 1 0.201799333095551 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005946 chr3:50005961 nonsynonymous SNV 0.995 1 36 hm5C_associated_SNPs_30146 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50005826-50005963
64251 chr2 54856375 54856375 1 + G A LUSC 54856361 + 54856341 54856381 41 CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACA CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCAAAGACA < 41bp 1 0.0141962086482776 1 0.0586946606636047 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856361 chr2:54856375 nonsynonymous SNV 0.999 0 35 hm5C_associated_SNPs_30147 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856375 54856375 1 + G A LUSC 54856362 + 54856342 54856382 41 AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACAT AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCAAAGACAT < 41bp 1 0.257615447260094 1 0.0509568452835083 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856362 chr2:54856375 nonsynonymous SNV 0.999 0 34 hm5C_associated_SNPs_30148 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856375 54856375 1 + G A LUSC 54856365 + 54856345 54856385 41 GGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACATGAT GGCCACTTTGAGCAGGCCATCAAGGAAGGCAAAGACATGAT < 41bp 1 0.614733177236991 1 0.770099759101868 experiment 0.770533645526017 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856365 chr2:54856375 nonsynonymous SNV 0.999 0 31 hm5C_associated_SNPs_30149 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr20 37154652 37154652 1 + G T LUSC 37154672 + 37154652 37154692 41 GAAACGGACCCCAACAACACCCAAATGATATTAGGTTTGTA TAAACGGACCCCAACAACACCCAAATGATATTAGGTTTGTA < 41bp 1 0.0778488787035886 1 0.231358081102371 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37154672 chr20:37154652 stopgain 0.990 1 1 hm5C_associated_SNPs_30151 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr20:37154593-37154653
64251 chr3 183885468 183885468 1 + G T LUSC 183885453 + 183885433 183885473 41 CCTGAATCAGGGTTGGAGGTCCGTGACCGCATGTGGCTCAA CCTGAATCAGGGTTGGAGGTCCGTGACCGCATGTGTCTCAA < 41bp 1 0.249596400164568 1 0.183283507823944 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885453 chr3:183885468 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_30155 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:183885436-183885474
64251 chr2 233671354 233671354 1 + C T LUSC 233671347 + 233671327 233671367 41 GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG GGGTTCCCTTTTCTCCAGGTCCAGCTCTCCCTCCTCATATG < 41bp 1 0.11822191384846 1 0.0260702669620514 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671347 chr2:233671354 nonsynonymous SNV 0.979 3 28 hm5C_associated_SNPs_30156 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671354 233671354 1 + C T LUSC 233671348 + 233671328 233671368 41 GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG GGTTCCCTTTTCTCCAGGTCCAGCTCTCCCTCCTCATATGG < 41bp 1 0.231755512287355 1 0.0712853074073792 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671348 chr2:233671354 nonsynonymous SNV 0.979 3 27 hm5C_associated_SNPs_30157 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671354 233671354 1 + C T LUSC 233671351 + 233671331 233671371 41 TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA TCCCTTTTCTCCAGGTCCAGCTCTCCCTCCTCATATGGTAA < 41bp 1 0.0393905500503518 1 0.258984923362732 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671351 chr2:233671354 nonsynonymous SNV 0.979 3 24 hm5C_associated_SNPs_30158 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671354 233671354 1 + C T LUSC 233671355 + 233671335 233671375 41 TTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTAC TTTTCTCCAGGTCCAGCTCTCCCTCCTCATATGGTAAGTAC < 41bp 1 0.0683252152448919 1 0.102609604597092 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671355 chr2:233671354 nonsynonymous SNV 0.979 3 20 hm5C_associated_SNPs_30159 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671354 233671354 1 + C T LUSC 233671356 + 233671336 233671376 41 TTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACC TTTCTCCAGGTCCAGCTCTCCCTCCTCATATGGTAAGTACC < 41bp 1 0.0236253508084036 1 0.0485194325447083 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671356 chr2:233671354 nonsynonymous SNV 0.979 3 19 hm5C_associated_SNPs_30160 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671354 233671354 1 + C T LUSC 233671357 + 233671337 233671377 41 TTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACCT TTCTCCAGGTCCAGCTCTCCCTCCTCATATGGTAAGTACCT < 41bp 1 0.300746118213707 1 0.06482794880867 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671357 chr2:233671354 nonsynonymous SNV 0.979 3 18 hm5C_associated_SNPs_30161 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr16 22237271 22237271 1 + C G LUSC 22237252 + 22237232 22237272 41 GCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGGTCC GCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGGTGC < 41bp 1 0.415723457973727 1 0.566274106502533 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22237252 chr16:22237271 nonsynonymous SNV 0.807 3 40 hm5C_associated_SNPs_30164 0 0 1 PRPF8 POSTAR2 ENCODE chr16:22237255-22237330
64251 chr1 42925442 42925442 1 + G C LUSC 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTCAGTCACGACAGTCCTTTGTGTTTATTGTA < 41bp 1 0.0617206741236565 1 0.0848642289638519 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925442 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_30165 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr8 133855011 133855011 1 + G C LUSC 133855017 + 133854997 133855037 41 TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA TCTCGCAGACCCTGCGAGCTCAGATGATGATGATGTTAGTA < 41bp 1 0.55029120809603 1 0.553979337215424 experiment 0.899417583807939 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133855017 chr8:133855011 nonsynonymous SNV 0.996 1 15 hm5C_associated_SNPs_30166 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133854993-133855045
64251 chr18 74620347 74620347 1 + A T LUSC 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATAGATGACAGCACTGTAGACCAGCTGAGCATGC < 41bp 1 0.479282302264594 1 0.170702040195465 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620347 nonsynonymous SNV 0.788 1 33 hm5C_associated_SNPs_30167 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:74620322-74620347
64251 chr7 2686580 2686580 1 + C T LUSC 2686570 + 2686550 2686590 41 TTCTACTCCTTCTGGCTGTGCTGCCGGCGGCGCAAGAGCGA TTCTACTCCTTCTGGCTGTGCTGCCGGCGGTGCAAGAGCGA < 41bp 1 0.316976058908601 1 0.37427169084549 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686570 chr7:2686580 nonsynonymous SNV 0.997 4 31 hm5C_associated_SNPs_30168 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2686553-2686585
64251 chr10 17276803 17276803 1 + G T LUSC 17276805 + 17276785 17276825 41 CTCACCTGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC CTCACCTGTGAAGTGGATTCCCTTAAAGGAACCGTGAGTAC < 41bp 1 0.159616233268652 1 0.0449380576610565 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276805 chr10:17276803 nonsynonymous SNV 0.988 2 19 hm5C_associated_SNPs_30169 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr10 17276803 17276803 1 + G T LUSC 17276817 + 17276797 17276837 41 GTGGATGCCCTTAAAGGAACCGTGAGTACCAACCCTGCAGT GTGGATTCCCTTAAAGGAACCGTGAGTACCAACCCTGCAGT < 41bp 1 0.678022762051125 1 0.577186584472656 experiment 0.643954475897751 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276817 chr10:17276803 nonsynonymous SNV 0.988 2 7 hm5C_associated_SNPs_30170 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr16 77232101 77232101 1 + A T LUSC 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGTAAGAGGAGGACCGGCTCTTCATTCGTTACCCA < 41bp 1 0.561447341927294 1 0.318897426128387 experiment 0.877105316145412 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232101 stopgain 1.000 1 9 hm5C_associated_SNPs_30172 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:77232100-77232120
64251 chr14 39650817 39650817 1 + G T LUSC 39650825 + 39650805 39650845 41 GTAGAAGTCGGAGTAGGGGCCGGGGACATAATAGAGATAGA GTAGAAGTCGGATTAGGGGCCGGGGACATAATAGAGATAGA < 41bp 1 0.722726473694221 1 0.90825754404068 experiment 0.554547052611557 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650825 chr14:39650817 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_30173 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr14 39650817 39650817 1 + G T LUSC 39650831 + 39650811 39650851 41 GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC GTCGGATTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC < 41bp 1 0.689019653495021 1 0.152854114770889 experiment 0.621960693009959 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650831 chr14:39650817 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_30174 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr7 150765122 150765122 1 + C G LUSC 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTGCG < 41bp 1 0.536116653683616 1 0.371825397014618 experiment 0.927766692632768 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765122 synonymous SNV . 0 39 hm5C_associated_SNPs_30175 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr7 150765122 150765122 1 + C G LUSC 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTGCGC < 41bp 1 0.522024379009194 1 0.575860559940338 experiment 0.955951241981612 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765122 synonymous SNV . 0 38 hm5C_associated_SNPs_30176 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr15 78841227 78841227 1 + G A LUSC 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAAAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA < 41bp 1 0.677359362308309 1 0.454132884740829 experiment 0.645281275383383 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841227 nonsynonymous SNV 0.998 1 3 hm5C_associated_SNPs_30177 0 0 35 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr5 176710800 176710800 1 + G A LUSC 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACCGAATCATTAATGCTGGTCCC < 41bp 1 0.0819231705079771 1 0.194554090499878 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710800 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_30183 0 0 6 LIN28A POSTAR2 GSE39873,GSM980594 chr5:176710780-176710800
64251 chr2 177015066 177015066 1 + G A LUSC 177015059 + 177015039 177015079 41 TGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTG TGTAACGTTGTCTATATATACCCTGTAAAACCGAATTTGTG < 41bp 1 0.292083463589168 1 0.0321970582008362 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015059 chr2:177015066 . . 0 28 hm5C_associated_SNPs_30184 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015066 177015066 1 + G A LUSC 177015060 + 177015040 177015080 41 GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGT GTAACGTTGTCTATATATACCCTGTAAAACCGAATTTGTGT < 41bp 1 0.15782296482317 1 0.0568874776363373 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015060 chr2:177015066 . . 0 27 hm5C_associated_SNPs_30185 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015066 177015066 1 + G A LUSC 177015069 + 177015049 177015089 41 TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGT TCTATATATACCCTGTAAAACCGAATTTGTGTGGTATCCGT < 41bp 1 0.701727440273667 1 0.0808618664741516 experiment 0.596545119452666 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015069 chr2:177015066 . . 0 18 hm5C_associated_SNPs_30186 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015066 177015066 1 + G A LUSC 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAAAACCGAATTTGTGTGGTATCCGTA < 41bp 1 0.466233708730333 1 0.0788421034812927 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015066 . . 0 17 hm5C_associated_SNPs_30187 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 197541356 197541356 1 + G A LUSC 197541357 + 197541337 197541377 41 GAACAGCTGTGCAAAAAGAGCTGCTAGAATCAACTATTGCA GAACAGCTGTGCAAAAAGAACTGCTAGAATCAACTATTGCA < 41bp 1 0.321360802216735 1 0.0727238655090332 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197541357 chr2:197541356 synonymous SNV . 0 20 hm5C_associated_SNPs_30189 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr2:197541352-197541395
64251 chrX 152959701 152959701 1 + C G LUSC 152959707 + 152959687 152959727 41 CTCTGCTTTGTCATCGATCTCTCCATGGTGACTGATGTGAG CTCTGCTTTGTCATGGATCTCTCCATGGTGACTGATGTGAG < 41bp 1 0.764390920142103 1 0.949604511260986 experiment 0.471218159715794 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959707 chrX:152959701 nonsynonymous SNV 0.998 0 15 hm5C_associated_SNPs_30190 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chrX 152959701 152959701 1 + C G LUSC 152959718 + 152959698 152959738 41 CATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG CATGGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG < 41bp 1 0.323003322478042 1 0.0906555950641632 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959718 chrX:152959701 nonsynonymous SNV 0.998 0 4 hm5C_associated_SNPs_30191 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chr6 87967475 87967475 1 + C A LUSC 87967481 + 87967461 87967501 41 GATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC GATGGGAAATTTATATGTAGCAGGTGTTACAGGGCTTTTAC < 41bp 1 0.618358276751515 1 0.698301672935486 experiment 0.763283446496971 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87967481 chr6:87967475 synonymous SNV . 0 15 hm5C_associated_SNPs_30192 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:87967449-87967477
64251 chr7 45112369 45112369 1 + G T LUSC 45112377 + 45112357 45112397 41 ACCTACGAGGTGGAAGCCAGCACTTTGTGAGTGCACATGCC ACCTACGAGGTGTAAGCCAGCACTTTGTGAGTGCACATGCC < 41bp 1 0.235361158331871 1 0.0336934924125671 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCM2 ENSG00000136280 CDS Human protein_coding chr7:45112377 chr7:45112369 stopgain 0.244 0 13 hm5C_associated_SNPs_30193 0 0 2 BUD13 POSTAR2 ENCODE chr7:45112332-45112398
64251 chr1 45267581 45267581 1 + G A LUSC 45267571 + 45267551 45267591 41 GGTGGGGGATTTTGGGCTGGCAGCCCGGTTGGAGCCTCCGG GGTGGGGGATTTTGGGCTGGCAGCCCGGTTAGAGCCTCCGG < 41bp 1 0.429386158792971 1 0.199971526861191 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267571 chr1:45267581 synonymous SNV . 0 31 hm5C_associated_SNPs_30194 0 0 6 EFTUD2 POSTAR2 ENCODE chr1:45267580-45267601
64251 chr1 45244297 45244297 1 + G T LUSC 45244279 + 45244259 45244299 41 TCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCT TCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTTCT < 41bp 1 0.336203596088229 1 0.429712861776352 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244279 chr1:45244297 synonymous SNV . 0 39 hm5C_associated_SNPs_30195 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:45244292-45244356
64251 chr1 45244297 45244297 1 + G T LUSC 45244284 + 45244264 45244304 41 GCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGG GCCGGGACAGTGTGGCCGAGCAGATGGCTATGTTCTAGAGG < 41bp 1 0.604280802193352 1 0.151397466659546 experiment 0.791438395613296 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244284 chr1:45244297 synonymous SNV . 0 34 hm5C_associated_SNPs_30196 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:45244292-45244356
64251 chr16 2816306 2816306 1 + G C LUSC 2816297 + 2816277 2816317 41 CCCAGTGAGCAGAAGGCGATCCAGATCCAGAACGCCACCAG CCCAGTGAGCAGAAGGCGATCCAGATCCACAACGCCACCAG < 41bp 1 0.671971574181496 1 0.739083766937256 experiment 0.656056851637008 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816297 chr16:2816306 nonsynonymous SNV 0.998 2 30 hm5C_associated_SNPs_30197 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2816068-2816556
64251 chr7 12269405 12269405 1 + T A LUSC 12269401 + 12269381 12269421 41 AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATT AAACAGTTATTGGAAAGGCACGCTAAAACAACATAACCATT < 41bp 1 0.499539935934763 1 0.0981483459472656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12269401 chr7:12269405 stopgain 1.000 0 25 hm5C_associated_SNPs_30199 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:12269405-12269441
64251 chr10 98744488 98744488 1 + A T LUSC 98744477 + 98744457 98744497 41 GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCATGCTGATGG GGGCCTACGGTGAAAGCCAGCAAAGAAAAGCTTGCTGATGG < 41bp 1 0.570814030605133 1 0.433108001947403 experiment 0.858371938789735 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LCOR ENSG00000155640 CDS Human other chr10:98744477 chr10:98744488 nonsynonymous SNV 0.156 1 32 hm5C_associated_SNPs_30200 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:98744486-98744522
64251 chr10 104140380 104140380 1 + G A LUSC 104140373 + 104140353 104140393 41 CCCTCGGCCCTCTGGGAGATCACCTGGGAACGCATTGACTG CCCTCGGCCCTCTGGGAGATCACCTGGAAACGCATTGACTG < 41bp 1 0.423341280672589 1 0.185358583927155 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104140373 chr10:104140380 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_30201 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:104140371-104140428
64251 chr11 67202553 67202553 1 + G T LUSC 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TCTACCTCCACTCCTGCCACCGCCTCCGCCCTCGACCACCG < 41bp 1 0.584469245669447 1 0.217997342348099 experiment 0.831061508661105 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202553 synonymous SNV . 0 25 hm5C_associated_SNPs_30203 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202553 67202553 1 + G T LUSC 67202551 + 67202531 67202571 41 TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCC TACCTCCACTCCTGCCACCGCCTCCGCCCTCGACCACCGCC < 41bp 1 0.108430017323332 1 0.148711353540421 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202551 chr11:67202553 synonymous SNV . 0 23 hm5C_associated_SNPs_30204 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202553 67202553 1 + G T LUSC 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCGCCTCCGCCCTCGACCACCGCCCCTC < 41bp 1 0.675463361569037 1 0.232030779123306 experiment 0.649073276861926 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202553 synonymous SNV . 0 19 hm5C_associated_SNPs_30205 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr10 12148367 12148367 1 + G T LUSC 12148373 + 12148353 12148393 41 TTCAATGGTGCCCAGATCATCTTTGACACATTCATCTCTGG TTCAATGGTGCCCATATCATCTTTGACACATTCATCTCTGG < 41bp 1 0.163446878174874 1 0.145819783210754 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12148373 chr10:12148367 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_30206 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr10:12148367-12148377
64251 chr2 37475350 37475350 1 + C A LUSC 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATGAATACAAAGAAGATGGGAGAGAGAT < 41bp 1 0.422185823570759 1 0.211309522390366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475350 nonsynonymous SNV 0.998 2 20 hm5C_associated_SNPs_30207 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37475333-37475360
64251 chr17 47904775 47904775 1 + G A LUSC 47904766 + 47904746 47904786 41 CCATTGTTCTCCCTCAGGACCTGATTGATGAGTGGATAGCC CCATTGTTCTCCCTCAGGACCTGATTGATAAGTGGATAGCC < 41bp 1 0.223482049138739 1 0.0248854756355286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KAT7 ENSG00000136504 CDS Human protein_coding chr17:47904766 chr17:47904775 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_30218 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47904759-47904795
64251 chr17 39974690 39974690 1 + G A LUSC 39974691 + 39974671 39974711 41 TCTGGTTGGCTGATCAAGGGCATGGACCAGGGGCTGCTGGG TCTGGTTGGCTGATCAAGGACATGGACCAGGGGCTGCTGGG < 41bp 1 0.425848278443043 1 0.142030119895935 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974691 chr17:39974690 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_30219 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:39974661-39974691
64251 chr17 39974690 39974690 1 + G A LUSC 39974698 + 39974678 39974718 41 GGCTGATCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGT GGCTGATCAAGGACATGGACCAGGGGCTGCTGGGCATGTGT < 41bp 1 0.612974657605577 1 0.887399792671204 experiment 0.774050684788847 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974698 chr17:39974690 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_30220 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:39974661-39974691
64251 chr17 39974690 39974690 1 + G A LUSC 39974704 + 39974684 39974724 41 TCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGTCCTGGA TCAAGGACATGGACCAGGGGCTGCTGGGCATGTGTCCTGGA < 41bp 1 0.313143323954158 1 0.0371644496917725 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974704 chr17:39974690 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_30221 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:39974661-39974691
64251 chr12 6943117 6943117 1 + G A LUSC 6943099 + 6943079 6943119 41 TCCCTGGCAGATGTCCTTCTCCTGGAGGGTGTGACCTTGAC TCCCTGGCAGATGTCCTTCTCCTGGAGGGTGTGACCTTAAC < 41bp 1 0.245419102058999 1 0.821785926818848 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943099 chr12:6943117 synonymous SNV . 0 39 hm5C_associated_SNPs_30223 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr12:6943111-6943137
64251 chr7 56066709 56066709 1 + A G LUSC 56066725 + 56066705 56066745 41 ACTTATTCAGGAAATGGAATCCAGAATCATGATCCCACTGA ACTTGTTCAGGAAATGGAATCCAGAATCATGATCCCACTGA < 41bp 1 0.756312132720251 1 0.694422721862793 experiment 0.487375734559497 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56066725 chr7:56066709 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_30224 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:56066709-56066710
64251 chr16 81077201 81077201 1 + A G LUSC 81077198 + 81077178 81077218 41 GCTTGCTCTCTTAAGGAGAGCCTACCTCTTTTCAAAATTGC GCTTGCTCTCTTAAGGAGAGCCTGCCTCTTTTCAAAATTGC < 41bp 1 0.0392894881168376 1 0.056659072637558 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077198 chr16:81077201 synonymous SNV . 0 24 hm5C_associated_SNPs_30225 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:81077149-81077216
64251 chr16 53504316 53504316 1 + G T LUSC 53504331 + 53504311 53504351 41 TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG TGGAGTGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG < 41bp 1 0.101680130309165 1 0.34819757938385 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504331 chr16:53504316 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_30226 0 0 10 BUD13 POSTAR2 ENCODE chr16:53504275-53504321
64251 chr21 47842000 47842000 1 + G A LUSC 47842001 + 47841981 47842021 41 GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC GTTTCAGCCGCTGCCGGAAACCATGAAGGAGAAGGAAGTGC < 41bp 1 0.0641335145056469 1 0.22693207859993 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47842001 chr21:47842000 nonsynonymous SNV 0.609 0 20 hm5C_associated_SNPs_30227 0 0 1 PRPF8 POSTAR2 ENCODE chr21:47841987-47842095
64251 chr2 162242066 162242066 1 + A G LUSC 162242075 + 162242055 162242095 41 GGGTCACTTAAACAAGCCATCTATCCAGGTATTGCCTATAT GGGTCACTTAAGCAAGCCATCTATCCAGGTATTGCCTATAT < 41bp 1 0.119085135404211 1 0.246283859014511 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162242075 chr2:162242066 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_30229 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:162242017-162242067
64251 chr11 111835392 111835392 1 + C T LUSC 111835377 + 111835357 111835397 41 GATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGAT GATCTCCGGGATGGGGTGATCCTGGCATATCTCATTGAGAT < 41bp 1 0.405059256122853 1 0.46609354019165 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111835377 chr11:111835392 synonymous SNV . 0 36 hm5C_associated_SNPs_30230 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:111835357-111835393
64251 chr11 67376945 67376945 1 + G T LUSC 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACTCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG < 41bp 1 0.456284496873354 1 0.737952530384064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376945 nonsynonymous SNV 0.935 3 6 hm5C_associated_SNPs_30231 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr3 12571315 12571315 1 + G A LUSC 12571319 + 12571299 12571339 41 AAGGCTCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCT AAGGCTCTCTCCGCAGACCTCTCAGTTGGAAGTCCCTGGCT < 41bp 1 0.733858236706858 1 0.783206343650818 experiment 0.532283526586283 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12571319 chr3:12571315 synonymous SNV . 0 17 hm5C_associated_SNPs_30232 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:12571299-12571319
64251 chr7 100485417 100485417 1 + A G LUSC 100485418 + 100485398 100485438 41 GTTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC GTTTTTTAACAACTTCCTCGCTGATGCTAAGCGCCCAGCTC < 41bp 1 0.409334971867058 1 0.158850282430649 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485418 chr7:100485417 nonsynonymous SNV 0.996 1 20 hm5C_associated_SNPs_30233 0 0 15 EIF3G POSTAR2 GSE65004,GSM1585674 chr7:100485398-100485420
64251 chr15 41862298 41862298 1 + G A LUSC 41862285 + 41862265 41862305 41 TGTGGTCCTTGGTGTGCTAACGGCCCTGGTGACGGCTGCTG TGTGGTCCTTGGTGTGCTAACGGCCCTGGTGACAGCTGCTG < 41bp 1 0.673404669616821 1 0.194691687822342 experiment 0.653190660766358 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862285 chr15:41862298 synonymous SNV . 0 34 hm5C_associated_SNPs_30234 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:41862295-41862322
64251 chr14 102445718 102445718 1 + G A LUSC 102445731 + 102445711 102445751 41 CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTACGA CAGCTCCAGGTCCTTACACTCAGTGAAGACTCGCCCTACGA < 41bp 1 0.204531727203917 1 0.73996639251709 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102445731 chr14:102445718 nonsynonymous SNV 0.992 1 8 hm5C_associated_SNPs_30235 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr14:102445700-102445720
64251 chr5 149751742 149751742 1 + G A LUSC 149751738 + 149751718 149751758 41 CAAGAAGCCAGAAGAGGAGTCAGAGAGTAGTGAGGAGGGAT CAAGAAGCCAGAAGAGGAGTCAGAAAGTAGTGAGGAGGGAT < 41bp 1 0.428491377614255 1 0.60915207862854 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751738 chr5:149751742 synonymous SNV . 0 25 hm5C_associated_SNPs_30236 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr5 149751742 149751742 1 + G A LUSC 149751759 + 149751739 149751779 41 AGAGAGTAGTGAGGAGGGATCTGAAAGTGAGGAGGAGGCCC AGAAAGTAGTGAGGAGGGATCTGAAAGTGAGGAGGAGGCCC < 41bp 1 0.67039751335748 1 0.57197093963623 experiment 0.65920497328504 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149751759 chr5:149751742 synonymous SNV . 0 4 hm5C_associated_SNPs_30237 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149751712-149751792
64251 chr9 140137199 140137199 1 + G C LUSC 140137216 + 140137196 140137236 41 TCAGACACAGTGGTGGAGCCCTACAACGCCACCCTCTCAGT TCACACACAGTGGTGGAGCCCTACAACGCCACCCTCTCAGT < 41bp 1 0.744830160433736 1 0.483550399541855 experiment 0.510339679132528 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137216 chr9:140137199 nonsynonymous SNV 0.999 2 4 hm5C_associated_SNPs_30239 0 0 18 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:140137160-140137200
64251 chr1 180034372 180034372 1 + G A LUSC 180034360 + 180034340 180034380 41 ATCTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA ATCTCCAGCAGTGAAACTAGCAGCATTATGCAAAAACTGAA < 41bp 1 0.562121301105635 1 0.155600070953369 experiment 0.87575739778873 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180034360 chr1:180034372 synonymous SNV . 0 33 hm5C_associated_SNPs_30240 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:180034360-180034380
64251 chr16 22328500 22328500 1 + G C LUSC 22328499 + 22328479 22328519 41 CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT CTGCGCACGCTGCCCCTGGCCCATCAGATCAAGATCCTGAT < 41bp 1 0.0598869823045544 1 0.0899012982845306 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22328499 chr16:22328500 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_30242 0 0 5 BUD13 POSTAR2 ENCODE chr16:22328410-22328512
64251 chr8 145727009 145727009 1 + G A LUSC 145727002 + 145726982 145727022 41 TAGACCGGAGTGTCTCCTACCAGCTGAGCCCCCTGGACAGC TAGACCGGAGTGTCTCCTACCAGCTGAACCCCCTGGACAGC < 41bp 1 0.537100130059641 1 0.623322665691376 experiment 0.925799739880718 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727002 chr8:145727009 nonsynonymous SNV 0.322 0 28 hm5C_associated_SNPs_30243 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr8 145727009 145727009 1 + G A LUSC 145727024 + 145727004 145727044 41 GCTGAGCCCCCTGGACAGCACCACCCCCCACACCCTGGTCC GCTGAACCCCCTGGACAGCACCACCCCCCACACCCTGGTCC < 41bp 1 0.133010885514068 1 0.0645573139190674 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727024 chr8:145727009 nonsynonymous SNV 0.322 0 6 hm5C_associated_SNPs_30244 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr11 66411341 66411341 1 + C T LUSC 66411334 + 66411314 66411354 41 TCGATCCCTACGATAGACACCTGTTGCCGACCTCAGGAGCT TCGATCCCTACGATAGACACCTGTTGCTGACCTCAGGAGCT < 41bp 1 0.125371851000552 1 0.1197609603405 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411334 chr11:66411341 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_30245 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:66411300-66411360
64251 chr16 5127927 5127927 1 + A C LUSC 5127916 + 5127896 5127936 41 ATTTCATTGCAGGGCTGTGACCGTCTACGACAAGCCCGCAT ATTTCATTGCAGGGCTGTGACCGTCTACGACCAGCCCGCAT < 41bp 1 0.167623199942754 1 0.218217194080353 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127916 chr16:5127927 nonsynonymous SNV 0.043 3 32 hm5C_associated_SNPs_30247 0 0 1 SND1 POSTAR2 ENCODE chr16:5127906-5127937
64251 chr8 73921123 73921123 1 + T C LUSC 73921113 + 73921093 73921133 41 AGGGGCAGTACCCAAGCGAGCCATTTAACATGGCGGAGGAT AGGGGCAGTACCCAAGCGAGCCATTTAACACGGCGGAGGAT < 41bp 1 0.260078212845073 1 0.0399024188518524 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921113 chr8:73921123 nonsynonymous SNV 0.550 4 31 hm5C_associated_SNPs_30248 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:73921120-73921140
64251 chr8 145697789 145697789 1 + G T LUSC 145697780 + 145697760 145697800 41 GGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG GGGCCTCCCGAGCGCCTGGCCGTGAGGCATGGCCCAGAAGG < 41bp 1 0.69595510954512 1 0.66035395860672 experiment 0.608089780909759 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145697780 chr8:145697789 nonsynonymous SNV 0.867 0 30 hm5C_associated_SNPs_30251 0 0 2 PPIG POSTAR2 ENCODE chr8:145697743-145697804
64251 chr5 179151779 179151779 1 + A T LUSC 179151781 + 179151761 179151801 41 AGGAGGAAGGAGAAGAGAAACTTGGTAAGAAACAGAGTCCA AGGAGGAAGGAGAAGAGATACTTGGTAAGAAACAGAGTCCA < 41bp 1 0.691053801425154 1 0.221968770027161 experiment 0.617892397149692 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151781 chr5:179151779 nonsynonymous SNV 0.953 0 19 hm5C_associated_SNPs_30252 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr5:179151739-179151784
64251 chr13 77570191 77570191 1 + G T LUSC 77570189 + 77570169 77570209 41 TGGTGTAATCAAGGCGCTGCCTGCTTTTTTGAGGGAATTGA TGGTGTAATCAAGGCGCTGCCTTCTTTTTTGAGGGAATTGA < 41bp 1 0.329609429627264 1 0.15270933508873 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570189 chr13:77570191 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_30259 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr13:77570178-77570245
64251 chr10 17275867 17275867 1 + T A LUSC 17275853 + 17275833 17275873 41 AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAA AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGACAGCAA < 41bp 1 0.601480811367868 1 0.832867324352264 experiment 0.797038377264264 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275853 chr10:17275867 synonymous SNV . 0 35 hm5C_associated_SNPs_30260 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr10 17275867 17275867 1 + T A LUSC 17275856 + 17275836 17275876 41 CTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATAT CTGACCTCACGGCTGCCCTGCGTGACGTACGACAGCAATAT < 41bp 1 0.374026110656239 1 0.193407416343689 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275856 chr10:17275867 synonymous SNV . 0 32 hm5C_associated_SNPs_30261 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr10 17275867 17275867 1 + T A LUSC 17275861 + 17275841 17275881 41 CTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG CTCACGGCTGCCCTGCGTGACGTACGACAGCAATATGAAAG < 41bp 1 0.100359644377958 1 0.0528012812137604 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275861 chr10:17275867 synonymous SNV . 0 27 hm5C_associated_SNPs_30262 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17275860-17275880
64251 chr11 44639802 44639802 1 + G T LUSC 44639783 + 44639763 44639803 41 CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCGA CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCTA < 41bp 1 0.401916091909102 1 0.0853052735328674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44639783 chr11:44639802 stopgain 0.317 0 40 hm5C_associated_SNPs_30268 0 0 2 SND1 POSTAR2 ENCODE chr11:44639711-44639850
64251 chr19 57723037 57723037 1 + G T LUSC 57723054 + 57723034 57723074 41 CAGGTAAAGATCCCATGATTCAGGAAGAGGAAAATAACTTT CAGTTAAAGATCCCATGATTCAGGAAGAGGAAAATAACTTT < 41bp 1 0.768281902678387 1 0.892247438430786 experiment 0.463436194643227 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57723054 chr19:57723037 nonsynonymous SNV 0.972 0 4 hm5C_associated_SNPs_30269 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:57723016-57723042
64251 chr11 44639800 44639800 1 + G T LUSC 44639783 + 44639763 44639803 41 CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCGA CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTTCGA < 41bp 1 0.365936271007297 1 0.0709591209888458 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44639783 chr11:44639800 nonsynonymous SNV 0.776 4 38 hm5C_associated_SNPs_30270 0 0 2 SND1 POSTAR2 ENCODE chr11:44639711-44639850
64251 chr3 48501837 48501837 1 + A G LUSC 48501851 + 48501831 48501871 41 GTAGAGACCAACCCTGAGGACTCAGTGTGCATCCTGGAAGG GTAGAGGCCAACCCTGAGGACTCAGTGTGCATCCTGGAAGG < 41bp 1 0.382664534323275 1 0.364351630210876 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48501851 chr3:48501837 nonsynonymous SNV 0.816 0 7 hm5C_associated_SNPs_30274 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:48501836-48501863
64251 chr1 222791476 222791476 1 + C T LUSC 222791471 + 222791451 222791491 41 ACATGGCTGCGGCGCCTGGGCTGCTCGTCTGGCTGCTCGTG ACATGGCTGCGGCGCCTGGGCTGCTTGTCTGGCTGCTCGTG < 41bp 1 0.613894684852373 1 0.05873042345047 experiment 0.772210630295255 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222791471 chr1:222791476 synonymous SNV . 0 26 hm5C_associated_SNPs_30275 0 0 4 DDX3X POSTAR2 ENCODE chr1:222791472-222791530
64251 chr19 36223339 36223339 1 + G A LUSC 36223344 + 36223324 36223364 41 GGCTCCCCCTGGCCCGGCCCCATCTCCACCACCCCCTGAAG GGCTCCCCCTGGCCCAGCCCCATCTCCACCACCCCCTGAAG < 41bp 1 0.0387799606397614 1 0.126233965158463 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36223344 chr19:36223339 synonymous SNV . 0 16 hm5C_associated_SNPs_30276 0 0 4 DDX59 POSTAR2 ENCODE chr19:36223265-36223342
64251 chr3 32483427 32483427 1 + G C LUSC 32483437 + 32483417 32483457 41 TTTGCGACTTGATAATGATCCTCGCCTTTTACCTGGTCCAC TTTGCGACTTCATAATGATCCTCGCCTTTTACCTGGTCCAC < 41bp 1 0.471618936465435 1 0.116212427616119 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483437 chr3:32483427 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_30277 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:32483382-32483427
64251 chr11 66249800 66249800 1 + C T LUSC 66249791 + 66249771 66249811 41 GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGC GCCTACCACCTGTCCCGTGCCGCCTGGTATGGAGGCCTGGC < 41bp 1 0.505431873677116 1 0.1248799264431 experiment 0.989136252645767 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249791 chr11:66249800 synonymous SNV . 0 30 hm5C_associated_SNPs_30278 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249800 66249800 1 + C T LUSC 66249793 + 66249773 66249813 41 CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTG CTACCACCTGTCCCGTGCCGCCTGGTATGGAGGCCTGGCTG < 41bp 1 0.348027600486076 1 0.0593896508216858 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249793 chr11:66249800 synonymous SNV . 0 28 hm5C_associated_SNPs_30279 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249800 66249800 1 + C T LUSC 66249794 + 66249774 66249814 41 TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTGT TACCACCTGTCCCGTGCCGCCTGGTATGGAGGCCTGGCTGT < 41bp 1 0.766170805830096 1 0.224855542182922 experiment 0.467658388339807 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249794 chr11:66249800 synonymous SNV . 0 27 hm5C_associated_SNPs_30280 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr22 26291141 26291141 1 + G C LUSC 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACGAGTGGCAGATGCCCTTCGACTGTGCTCAGATG < 41bp 1 0.0298564504481378 1 0.0800071656703949 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291141 nonsynonymous SNV 0.854 3 22 hm5C_associated_SNPs_30281 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr12 131488798 131488798 1 + G T LUSC 131488788 + 131488768 131488808 41 TTCCTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCA TTCCTCCCATTACCGCTTCCCGGCCCACGGTCAGAGCTTCA < 41bp 1 0.203526557218357 1 0.312256067991257 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488788 chr12:131488798 synonymous SNV . 0 31 hm5C_associated_SNPs_30282 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488798 131488798 1 + G T LUSC 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTCCCATTACCGCTTCCCGGCCCACGGTCAGAGCTTCATCC < 41bp 1 0.0438965533253879 1 0.0300208032131195 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488798 synonymous SNV . 0 28 hm5C_associated_SNPs_30283 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488798 131488798 1 + G T LUSC 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TCCCATTACCGCTTCCCGGCCCACGGTCAGAGCTTCATCCA < 41bp 1 0.239053386612812 1 0.158117979764938 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488798 synonymous SNV . 0 27 hm5C_associated_SNPs_30284 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488798 131488798 1 + G T LUSC 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG CCCATTACCGCTTCCCGGCCCACGGTCAGAGCTTCATCCAG < 41bp 1 0.624777834863092 1 0.414950370788574 experiment 0.750444330273815 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488798 synonymous SNV . 0 26 hm5C_associated_SNPs_30285 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488798 131488798 1 + G T LUSC 131488795 + 131488775 131488815 41 CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGAT CATTACCGCTTCCCGGCCCACGGTCAGAGCTTCATCCAGAT < 41bp 1 0.171142861876112 1 0.699609041213989 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488795 chr12:131488798 synonymous SNV . 0 24 hm5C_associated_SNPs_30286 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488798 131488798 1 + G T LUSC 131488799 + 131488779 131488819 41 ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCC ACCGCTTCCCGGCCCACGGTCAGAGCTTCATCCAGATCCCC < 41bp 1 0.423102253598534 1 0.751436829566956 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488799 chr12:131488798 synonymous SNV . 0 20 hm5C_associated_SNPs_30287 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr6 160494403 160494403 1 + G T LUSC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTGCAGGCCTTAGGCCAGGCCAACCAATAGGCCCAT < 41bp 1 0.337249456744708 1 0.823978662490845 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494403 stopgain 0.635 0 16 hm5C_associated_SNPs_30299 0 0 2 SND1 POSTAR2 ENCODE chr6:160494401-160494417
64251 chr6 146875734 146875734 1 + G A LUSC 146875716 + 146875696 146875736 41 AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTGTT AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTATT < 41bp 1 0.552059072081527 1 0.78357070684433 experiment 0.895881855836946 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875716 chr6:146875734 nonsynonymous SNV 0.997 2 39 hm5C_associated_SNPs_30300 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr6:146875720-146875740
64251 chrX 73045196 73045196 1 - T C LUSC 73045203 - 73045183 73045223 41 TGTGGATACAAAGAAAGGAGCAAGCATAAAAAAGTGCTCTT TGTGGATACAAAGAAAGGAGCAAGCATGAAAAAGTGCTCTT < 41bp 1 0.178450077824226 1 0.338649809360504 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045203 chrX:73045196 . . 0 28 hm5C_associated_SNPs_30301 0 0 42 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045196 73045196 1 - T C LUSC 73045215 - 73045195 73045235 41 TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATGA < 41bp 1 0.296646139752804 1 0.470594942569733 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045215 chrX:73045196 . . 0 40 hm5C_associated_SNPs_30302 0 0 42 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr1 65243601 65243601 1 + G T LUSC 65243608 + 65243588 65243628 41 GACTGGAGCTATTGGGTAGACAGTTGGGAGCATCAGCACTC GACTGGAGCTATTTGGTAGACAGTTGGGAGCATCAGCACTC < 41bp 1 0.581555559551149 1 0.120159238576889 experiment 0.836888880897703 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65243608 chr1:65243601 nonsynonymous SNV 0.917 1 14 hm5C_associated_SNPs_30303 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:65243589-65243618
64251 chr8 110569170 110569170 1 + A T LUSC 110569185 + 110569165 110569205 41 TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA TTGTTTTTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA < 41bp 1 0.0302924723557969 1 0.149513363838196 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569185 chr8:110569170 nonsynonymous SNV 0.995 2 6 hm5C_associated_SNPs_30309 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:110569167-110569190
64251 chr7 129093116 129093116 1 + G T LUSC 129093106 + 129093086 129093126 41 ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC ATTCAGAGGTCGATGTGCTACACTGGTCCATGTACAACTGC < 41bp 1 0.596682199701354 1 0.156086981296539 experiment 0.806635600597293 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093106 chr7:129093116 nonsynonymous SNV 0.998 4 31 hm5C_associated_SNPs_30310 0 0 2 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr7 148921516 148921516 1 + G C LUSC 148921521 + 148921501 148921541 41 AGCGGCTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTG AGCGGCTGCACACGGCCGAGCGGCCTTTCCAATGTGCACTG < 41bp 1 0.425180733791225 1 0.632315814495087 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921521 chr7:148921516 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_30311 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148921508-148921536
64251 chr11 65687430 65687430 1 + G C LUSC 65687433 + 65687413 65687453 41 CCTCAGCCCGGGCGCTCGAGCTCTTCCTAGAGTCGCTGTTG CCTCAGCCCGGGCGCTCCAGCTCTTCCTAGAGTCGCTGTTG < 41bp 1 0.281390314055581 1 0.153156191110611 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65687433 chr11:65687430 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_30312 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65687430-65687453
64251 chr19 13054408 13054408 1 + G A LUSC 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCATACGCTAAGGAGTTTGGCAACGA < 41bp 1 0.755080349614089 1 0.197851598262787 experiment 0.489839300771822 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054408 nonsynonymous SNV 0.532 1 25 hm5C_associated_SNPs_30313 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054408 13054408 1 + G A LUSC 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCATACGCTAAGGAGTTTGGCAACGAGA < 41bp 1 0.58184824599212 1 0.184961766004562 experiment 0.836303508015759 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054408 nonsynonymous SNV 0.532 1 23 hm5C_associated_SNPs_30314 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054408 13054408 1 + G A LUSC 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTAAGGAGTTTGGCAACGAGACGTGGGGCGTAAC < 41bp 1 0.578912396662461 1 0.582678318023682 experiment 0.842175206675078 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054408 nonsynonymous SNV 0.532 1 10 hm5C_associated_SNPs_30315 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054408 13054408 1 + G A LUSC 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TAAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA < 41bp 1 0.667567937944205 1 0.43988099694252 experiment 0.664864124111591 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054408 nonsynonymous SNV 0.532 1 2 hm5C_associated_SNPs_30316 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr2 74328110 74328110 1 + G C LUSC 74328122 + 74328102 74328142 41 TCAAGCAAGAGCCAGTAGACCCGCTGACCCAGGCTGAGCCT TCAAGCAACAGCCAGTAGACCCGCTGACCCAGGCTGAGCCT < 41bp 1 0.184912092457231 1 0.128584921360016 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328122 chr2:74328110 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_30317 0 0 2 YBX3 POSTAR2 ENCODE chr2:74328064-74328154
64251 chr19 39950220 39950220 1 + C G LUSC 39950216 + 39950196 39950236 41 TAGGGATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTG TAGGGATCCCAATCTGTGGACTGTGAAATGTAAGGTATGTG < 41bp 1 0.116520665413992 1 0.0984952747821808 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950216 chr19:39950220 synonymous SNV . 0 25 hm5C_associated_SNPs_30318 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr2 27900188 27900188 1 + G C LUSC 27900192 + 27900172 27900212 41 TAAATGATGCTGAAAGGGAACTTTCTGAAATTTCTGAGAGA TAAATGATGCTGAAAGCGAACTTTCTGAAATTTCTGAGAGA < 41bp 1 0.0342949891769459 1 0.0518271923065186 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900192 chr2:27900188 nonsynonymous SNV 0.486 0 17 hm5C_associated_SNPs_30319 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:27900162-27900219
64251 chr12 62954451 62954451 1 + T C LUSC 62954463 + 62954443 62954483 41 TGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGC TGTGCCTGCTCTTATAGGGCCCATATCAGGCATGAGCAGGC < 41bp 1 0.0769063981528856 1 0.134051531553268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62954463 chr12:62954451 nonsynonymous SNV 0.900 4 9 hm5C_associated_SNPs_30321 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:62954381-62954455
64251 chr17 77077136 77077136 1 + G A LUSC 77077130 + 77077110 77077150 41 AAAGTGGGCAGCTCAAATGGCAAGACGAACTCAACCAGCAC AAAGTGGGCAGCTCAAATGGCAAGACAAACTCAACCAGCAC < 41bp 1 0.658535831996713 1 0.661464095115662 experiment 0.682928336006575 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENGASE ENSG00000167280 CDS Human protein_coding chr17:77077130 chr17:77077136 nonsynonymous SNV 0.323 3 27 hm5C_associated_SNPs_30322 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:77077120-77077140
64251 chr13 48941708 48941708 1 + G A LUSC 48941724 + 48941704 48941744 41 TCATGATAAAACTCTTCAGACTGATTCTATAGACAGGTATT TCATAATAAAACTCTTCAGACTGATTCTATAGACAGGTATT < 41bp 1 0.160037505088761 1 0.0586643218994141 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48941724 chr13:48941708 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_30324 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr13:48941669-48941723
64251 chr16 68373336 68373336 1 + G A LUSC 68373342 + 68373322 68373362 41 TGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTT TGCAGACCAGCCTCAGAGAGCAGGTCATCGTCCCTCCCGTT < 41bp 1 0.610511449779425 1 0.499849289655685 experiment 0.778977100441149 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373342 chr16:68373336 nonsynonymous SNV 0.861 4 15 hm5C_associated_SNPs_30325 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:68373307-68373337
64251 chr6 116565164 116565164 1 + G C LUSC 116565147 + 116565127 116565167 41 TGGCTACTATCCAAATCCTCCACTGGTCTTATCAAGTGATG TGGCTACTATCCAAATCCTCCACTGGTCTTATCAAGTCATG < 41bp 1 0.201320944998405 1 0.0241162776947021 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116565147 chr6:116565164 nonsynonymous SNV 0.006 0 38 hm5C_associated_SNPs_30327 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:116565145-116565173
64251 chr19 47423195 47423195 1 + G A LUSC 47423199 + 47423179 47423219 41 ACGAGGCCCACTTAGAGAAGCTGAGGAACGAAAGGAAAAGA ACGAGGCCCACTTAGAAAAGCTGAGGAACGAAAGGAAAAGA < 41bp 1 0.372127761567196 1 0.339038908481598 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423199 chr19:47423195 synonymous SNV . 0 17 hm5C_associated_SNPs_30328 0 0 1 EIF3H POSTAR2 ENCODE chr19:47423153-47423202
64251 chr19 47423195 47423195 1 + G A LUSC 47423207 + 47423187 47423227 41 CACTTAGAGAAGCTGAGGAACGAAAGGAAAAGAGTTGAGAT CACTTAGAAAAGCTGAGGAACGAAAGGAAAAGAGTTGAGAT < 41bp 1 0.469498488062761 1 0.505952715873718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423207 chr19:47423195 synonymous SNV . 0 9 hm5C_associated_SNPs_30329 0 0 1 EIF3H POSTAR2 ENCODE chr19:47423153-47423202
64251 chr2 32673984 32673984 1 + G T LUSC 32673982 + 32673962 32674002 41 GTCAGATGAAATTGATTTATCAGATGTCCTTTCAGGTAGTG GTCAGATGAAATTGATTTATCATATGTCCTTTCAGGTAGTG < 41bp 1 0.0492180717284148 1 0.131064563989639 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673982 chr2:32673984 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_30330 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673984 32673984 1 + G T LUSC 32673989 + 32673969 32674009 41 GAAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTT GAAATTGATTTATCATATGTCCTTTCAGGTAGTGATTTCTT < 41bp 1 0.00527528880068437 1 0.0131539702415466 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673989 chr2:32673984 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_30331 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673984 32673984 1 + G T LUSC 32673990 + 32673970 32674010 41 AAATTGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTT AAATTGATTTATCATATGTCCTTTCAGGTAGTGATTTCTTT < 41bp 1 0.00706864731606944 1 0.0615566372871399 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673990 chr2:32673984 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_30332 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr2 32673984 32673984 1 + G T LUSC 32673994 + 32673974 32674014 41 TGATTTATCAGATGTCCTTTCAGGTAGTGATTTCTTTTATT TGATTTATCATATGTCCTTTCAGGTAGTGATTTCTTTTATT < 41bp 1 0.16133572898205 1 0.161861032247543 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32673994 chr2:32673984 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_30333 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:32673976-32674014
64251 chr8 128750739 128750739 1 + C G LUSC 128750748 + 128750728 128750768 41 TACGTTGCGGTCACACCCTTCTCCCTTCGGGGAGACAACGA TACGTTGCGGTGACACCCTTCTCCCTTCGGGGAGACAACGA < 41bp 1 0.572139598681723 1 0.783428192138672 experiment 0.855720802636554 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYC ENSG00000136997 CDS Human protein_coding chr8:128750748 chr8:128750739 synonymous SNV . 0 12 hm5C_associated_SNPs_30334 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:128750705-128750766
64251 chr3 128631375 128631375 1 + G C LUSC 128631356 + 128631336 128631376 41 CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATGAGCAGA CTTTTCCTTCCCAGATGCTCCAGAAAACCTAGATGAGCACA < 41bp 1 0.537000141368915 1 0.629260957241058 experiment 0.92599971726217 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128631356 chr3:128631375 nonsynonymous SNV 0.977 0 40 hm5C_associated_SNPs_30335 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128631362-128631394
64251 chr3 63965681 63965681 1 + G C LUSC 63965690 + 63965670 63965710 41 CAAAAGCAAAGGAGGCAGTGCAAGTGGAAGCAACCGTTCTT CAAAAGCAAAGCAGGCAGTGCAAGTGGAAGCAACCGTTCTT < 41bp 1 0.342707754305909 1 0.737779021263123 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63965690 chr3:63965681 nonsynonymous SNV 0.999 0 12 hm5C_associated_SNPs_30336 0 0 1 GRWD1 POSTAR2 ENCODE chr3:63965585-63965687
64251 chr16 4431739 4431739 1 + C A LUSC 4431752 + 4431732 4431772 41 GCCTCTTCCCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC GCCTCTTACCCCGCCTGCGGCTGCTGGCAGCTGCCCGCAAC < 41bp 1 0.593851169813013 1 0.233707249164581 experiment 0.812297660373974 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431752 chr16:4431739 nonsynonymous SNV 0.884 1 8 hm5C_associated_SNPs_30337 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4431702-4431743
64251 chr11 60704150 60704150 1 + C G LUSC 60704142 + 60704122 60704162 41 GGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC GGCCCTCCTGGGGGCACCACCAGCTCCTGAAGCACCCTGGC < 41bp 1 0.583613153294163 1 0.867550492286682 experiment 0.832773693411674 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704142 chr11:60704150 stopgain 0.027 0 29 hm5C_associated_SNPs_30338 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr11:60704149-60704150
64251 chr3 184648317 184648317 1 + G A LUSC 184648321 + 184648301 184648341 41 GACACAGTGCAGAGGAGAAGCAGTCTGTATGGCAGAAAGCA GACACAGTGCAGAGGAAAAGCAGTCTGTATGGCAGAAAGCA < 41bp 1 0.127440413383591 1 0.250581383705139 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184648321 chr3:184648317 synonymous SNV . 0 17 hm5C_associated_SNPs_30339 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184648293-184648331
64251 chr17 37358612 37358612 1 + G A LUSC 37358628 + 37358608 37358648 41 ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG ATCCACAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG < 41bp 1 0.103357725848101 1 0.0311072766780853 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358628 chr17:37358612 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_30340 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:37358570-37358613
64251 chr3 184040713 184040713 1 + C T LUSC 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CCAGAGGGATTGTCACATATCAGTGACGTGGTGCTGGACAA < 41bp 1 0.658051802658116 1 0.35762956738472 experiment 0.683896394683769 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040713 nonsynonymous SNV 0.993 3 13 hm5C_associated_SNPs_30341 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chr18 74622050 74622050 1 + C T LUSC 74622068 + 74622048 74622088 41 CTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCT CTTTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCT < 41bp 1 0.350841968819789 1 0.35276997089386 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74622068 chr18:74622050 synonymous SNV . 0 3 hm5C_associated_SNPs_30343 0 0 2 BUD13 POSTAR2 ENCODE chr18:74622015-74622079
64251 chr2 236877234 236877234 1 + T A LUSC 236877245 + 236877225 236877265 41 ACTAGCAACTTCAAAGCCGACGGCCTGTCCGGCACTGCTGA ACTAGCAACATCAAAGCCGACGGCCTGTCCGGCACTGCTGA < 41bp 1 0.139229914557481 1 0.500005424022675 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236877245 chr2:236877234 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_30344 0 0 7 BUD13 POSTAR2 ENCODE chr2:236877234-236877269
64251 chr2 236877234 236877234 1 + T A LUSC 236877249 + 236877229 236877269 41 GCAACTTCAAAGCCGACGGCCTGTCCGGCACTGCTGAAGGT GCAACATCAAAGCCGACGGCCTGTCCGGCACTGCTGAAGGT < 41bp 1 0.0413203413126492 1 0.220472484827042 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236877249 chr2:236877234 nonsynonymous SNV 0.999 1 6 hm5C_associated_SNPs_30345 0 0 7 BUD13 POSTAR2 ENCODE chr2:236877234-236877269
64251 chr11 73102251 73102251 1 + G T LUSC 73102245 + 73102225 73102265 41 TCAACCATGTTCCTGGGCACCTCTGGGTACTCATGGCTGTG TCAACCATGTTCCTGGGCACCTCTGGTTACTCATGGCTGTG < 41bp 1 0.270501824405211 1 0.199500679969788 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RELT ENSG00000054967 CDS Human protein_coding chr11:73102245 chr11:73102251 nonsynonymous SNV 0.034 2 27 hm5C_associated_SNPs_30347 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:73102229-73102255
64251 chr19 34292106 34292106 1 + G T LUSC 34292109 + 34292089 34292129 41 CCGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCCTGGCTG CCGGCTGTCTCTCACCCTGTCGCCTGTGTCTCCCCTGGCTG < 41bp 1 0.687418545116107 1 0.171174257993698 experiment 0.625162909767787 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34292109 chr19:34292106 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_30348 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34292079-34292106
64251 chr12 101720957 101720957 1 + G T LUSC 101720976 + 101720956 101720996 41 GGGACCCAACCTGAGGAGATCCAGATATTCTTAGACCTGCT GTGACCCAACCTGAGGAGATCCAGATATTCTTAGACCTGCT < 41bp 1 0.332534627609708 1 0.325878441333771 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101720976 chr12:101720957 nonsynonymous SNV 0.800 3 2 hm5C_associated_SNPs_30349 0 0 1 FMR1 POSTAR2 ENCODE chr12:101720905-101720981
64251 chr1 39927568 39927568 1 + C T LUSC 39927585 + 39927565 39927605 41 CACCAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC CACTAAGTTAGAGATGACTGCTGTGGCTGACATTTTCGACC < 41bp 1 0.133387770314954 1 0.0790388584136963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39927585 chr1:39927568 synonymous SNV . 0 4 hm5C_associated_SNPs_30352 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:39927560-39927580
64251 chr2 109400061 109400061 1 + A G MESO 109400063 + 109400043 109400083 41 TTTTTTCAGGGAGGAGATATCACCAAACATGATGGAACAGG TTTTTTCAGGGAGGAGATGTCACCAAACATGATGGAACAGG < 41bp 1 0.600238850872754 1 0.44956761598587 experiment 0.799522298254492 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109400063 chr2:109400061 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_30353 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:109400058-109400104
64251 chr1 87805758 87805758 1 + G A MESO 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCACCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC < 41bp 1 0.361787557627279 1 0.391092211008072 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805758 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_30355 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:87805740-87805762
64251 chr19 52195900 52195900 1 + C T MESO 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTTGC < 41bp 1 0.278686765963953 1 0.0851472914218903 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195882 chr19:52195900 . . 0 39 hm5C_associated_SNPs_30356 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195900 52195900 1 + C T MESO 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTTGCC < 41bp 1 0.386312942419755 1 0.258323699235916 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195883 chr19:52195900 . . 0 38 hm5C_associated_SNPs_30357 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195900 52195900 1 + C T MESO 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTTGCCGCA < 41bp 1 0.0973211307149762 1 0.0243508517742157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195900 . . 0 35 hm5C_associated_SNPs_30358 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195900 52195900 1 + C T MESO 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGGCCTTTGCCGCAC < 41bp 1 0.368040987268201 1 0.10883292555809 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195900 . . 0 34 hm5C_associated_SNPs_30359 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52196893 52196893 1 + C G MESO 52196899 + 52196879 52196919 41 TACTCTGAGCGCCTCCGCATCTGCCAGATGTTTGTTGGGAT TACTCTGAGCGCCTGCGCATCTGCCAGATGTTTGTTGGGAT < 41bp 1 0.193942980254464 1 0.450587689876556 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPACA6 ENSG00000182310;ENSG00000273318 ncRNA_exonic Human other chr19:52196899 chr19:52196893 . . 0 15 hm5C_associated_SNPs_30360 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52196804-52196904
64251 chr2 74154166 74154166 1 + C G MESO 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATGGAA < 41bp 1 0.662747279222574 1 0.21700257062912 experiment 0.674505441554852 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154166 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_30361 0 0 1 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr2 74154166 74154166 1 + C G MESO 74154151 + 74154131 74154171 41 CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATGGAAGG < 41bp 1 0.734297436452959 1 0.42449963092804 experiment 0.531405127094082 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154151 chr2:74154166 nonsynonymous SNV 0.998 4 36 hm5C_associated_SNPs_30362 0 0 1 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr2 74154166 74154166 1 + C G MESO 74154152 + 74154132 74154172 41 TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATGGAAGGC < 41bp 1 0.749234405799404 1 0.631132006645203 experiment 0.501531188401191 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154152 chr2:74154166 nonsynonymous SNV 0.998 4 35 hm5C_associated_SNPs_30363 0 0 1 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr2 219616512 219616512 1 + C A MESO 219616527 + 219616507 219616547 41 TGACCCAGAAAATTCCTGATCAGGTAGGAGATTGGTCTTCC TGACCAAGAAAATTCCTGATCAGGTAGGAGATTGGTCTTCC < 41bp 1 0.492433249287894 1 0.47981658577919 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219616527 chr2:219616512 nonsynonymous SNV 0.998 0 6 hm5C_associated_SNPs_30364 0 0 3 BUD13 POSTAR2 ENCODE chr2:219616496-219616527
64251 chr19 39898741 39898741 1 + A G MESO 39898755 + 39898735 39898775 41 TTGCCCATGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCAC TTGCCCGTGGCCTGGGCGAGCTGCGCCAGGCCAATCGCCAC < 41bp 1 0.750541032695425 1 0.110173583030701 experiment 0.498917934609151 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898755 chr19:39898741 nonsynonymous SNV 0.920 1 7 hm5C_associated_SNPs_30365 0 0 3 RBM15 POSTAR2 ENCODE chr19:39898734-39898776
64251 chr8 61533344 61533344 1 + C G MESO 61533362 + 61533342 61533382 41 GTCTAGCTGCCCAACGGGGCCTACTCACTTATTCTTTCACC GTGTAGCTGCCCAACGGGGCCTACTCACTTATTCTTTCACC < 41bp 1 0.467866621727636 1 0.0484136641025543 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB2A ENSG00000104388 CDS Human protein_coding chr8:61533362 chr8:61533344 synonymous SNV . 0 3 hm5C_associated_SNPs_30366 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:61533322-61533360
64251 chr12 132334405 132334405 1 + C T MESO 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCCGCGCCCCGTTTCCGACTTC < 41bp 1 0.281753905477645 1 0.101599991321564 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334405 synonymous SNV . 0 32 hm5C_associated_SNPs_30367 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr17 37074996 37074996 1 + G A MESO 37075006 + 37074986 37075026 41 CGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA CGGCGACACGAGGATGCTGCCGGCCAACTACGTGGAGGCCA < 41bp 1 0.626498794860752 1 0.543797850608826 experiment 0.747002410278495 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37075006 chr17:37074996 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_30368 0 0 5 FMR1 POSTAR2 ENCODE chr17:37074965-37074998
64251 chr6 1390647 1390647 1 + C G MESO 1390666 + 1390646 1390686 41 ACGAGTGCTTCATCAAGCTGCCTAAGGGCCTCGGGCGGCCC AGGAGTGCTTCATCAAGCTGCCTAAGGGCCTCGGGCGGCCC < 41bp 1 0.129269572578317 1 0.193350046873093 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390666 chr6:1390647 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_30369 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:1390580-1390647
64251 chr6 43153914 43153914 1 + C A MESO 43153923 + 43153903 43153943 41 CGGAACCTCAGCGAACAGGGCATGTCACCTCCCCGGCCAAC CGGAACCTCAGAGAACAGGGCATGTCACCTCCCCGGCCAAC < 41bp 1 0.149004349683802 1 0.129186511039734 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CUL9 ENSG00000112659 CDS Human protein_coding chr6:43153923 chr6:43153914 nonsynonymous SNV 0.078 1 12 hm5C_associated_SNPs_30370 0 0 2 EIF3H POSTAR2 ENCODE chr6:43153787-43153951
64251 chr2 207636934 207636934 1 + A G MESO 207636939 + 207636919 207636959 41 TGTCCTTTAAGAATAATGATCAACATATTGCAGTCCTGCAA TGTCCTTTAAGAATAGTGATCAACATATTGCAGTCCTGCAA < 41bp 1 0.663559016999133 1 0.418241441249847 experiment 0.672881966001735 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207636939 chr2:207636934 nonsynonymous SNV 0.951 1 16 hm5C_associated_SNPs_30371 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:207636923-207636963
64251 chr5 145641108 145641108 1 + C A MESO 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATACAA < 41bp 1 0.397710370227993 1 0.438653737306595 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641108 synonymous SNV . 0 38 hm5C_associated_SNPs_30373 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145641088-145641134
64251 chr19 6746056 6746056 1 + T C MESO 6746043 + 6746023 6746063 41 CCGGCCCCCGCCGGTAGCCTCGCCCCCCACCCCTCTCCCCC CCGGCCCCCGCCGGTAGCCTCGCCCCCCACCCCCCTCCCCC < 41bp 1 0.498194861737618 1 0.510723471641541 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6746043 chr19:6746056 nonsynonymous SNV 0.986 1 34 hm5C_associated_SNPs_30374 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6746040-6746078
64251 chr3 49011170 49011170 1 + G A MESO 49011181 + 49011161 49011201 41 CCACAGACTGTGCCACAATCCGGAAATGGCTCACGAAGTGT CCACAGACTATGCCACAATCCGGAAATGGCTCACGAAGTGT < 41bp 1 0.795881031544519 1 0.823307037353516 experiment 0.408237936910962 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49011181 chr3:49011170 nonsynonymous SNV 0.985 5 10 hm5C_associated_SNPs_30377 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:49011128-49011172
64251 chr4 123814171 123814171 1 - C A MESO 123814174 - 123814154 123814194 41 AGTGGATGGATCTCAATGACCTGGCGAAGACTGAAAATACA AGTGGATGGATCTCAATGACCTGTCGAAGACTGAAAATACA < 41bp 1 0.277708569859443 1 0.134845376014709 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814174 chr4:123814171 nonsynonymous SNV 0.105 1 24 hm5C_associated_SNPs_30378 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:123814156-123814184
64251 chr3 38180282 38180282 1 + C T MESO 38180279 + 38180259 38180299 41 CTGCTCTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTC CTGCTCTCAACATGCGAGTGCGGTGCCGCCTGTCTCTGTTC < 41bp 1 0.4126673920943 1 0.29258394241333 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180279 chr3:38180282 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_30381 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr3 38180282 38180282 1 + C T MESO 38180284 + 38180264 38180304 41 CTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTCTTGAA CTCAACATGCGAGTGCGGTGCCGCCTGTCTCTGTTCTTGAA < 41bp 1 0.152856100918088 1 0.329364836215973 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180284 chr3:38180282 nonsynonymous SNV 0.997 3 19 hm5C_associated_SNPs_30382 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr11 66033984 66033984 1 + G A MESO 66034001 + 66033981 66034021 41 TGGGCACTGGGCAGCTGCGGCCGGGGCTGCATGCGTGCTGC TGGACACTGGGCAGCTGCGGCCGGGGCTGCATGCGTGCTGC < 41bp 1 0.710100586043028 1 0.765784502029419 experiment 0.579798827913945 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC2 ENSG00000174996 CDS Human protein_coding chr11:66034001 chr11:66033984 nonsynonymous SNV 0.024 2 4 hm5C_associated_SNPs_30383 0 0 1 PRPF8 POSTAR2 ENCODE chr11:66033943-66034025
64251 chr3 38180281 38180281 1 + G T MESO 38180279 + 38180259 38180299 41 CTGCTCTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTC CTGCTCTCAACATGCGAGTGCGTCGCCGCCTGTCTCTGTTC < 41bp 1 0.26877534432986 1 0.0562611520290375 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180279 chr3:38180281 synonymous SNV . 0 23 hm5C_associated_SNPs_30384 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr3 38180281 38180281 1 + G T MESO 38180284 + 38180264 38180304 41 CTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTCTTGAA CTCAACATGCGAGTGCGTCGCCGCCTGTCTCTGTTCTTGAA < 41bp 1 0.209311318384919 1 0.223125547170639 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180284 chr3:38180281 synonymous SNV . 0 18 hm5C_associated_SNPs_30385 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr19 39899025 39899025 1 + G A MESO 39899016 + 39898996 39899036 41 TCTCGCCCTCCAGCTCCCCACCACCACCTGGGGACCTTCCA TCTCGCCCTCCAGCTCCCCACCACCACCTAGGGACCTTCCA < 41bp 1 0.11536148071724 1 0.157152563333511 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899016 chr19:39899025 nonsynonymous SNV 0.996 2 30 hm5C_associated_SNPs_30387 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39898982-39899077
64251 chr19 58772963 58772963 1 + C T MESO 58772944 + 58772924 58772964 41 AGAAGTGGCCCTGGAGAGACCCCCTTCAGATGTGAGGAACG AGAAGTGGCCCTGGAGAGACCCCCTTCAGATGTGAGGAATG < 41bp 1 0.261003985073684 1 0.156626015901566 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58772944 chr19:58772963 nonsynonymous SNV 0.000 0 40 hm5C_associated_SNPs_30388 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:58772954-58772992
64251 chr16 457424 457424 1 + G A MESO 457427 + 457407 457447 41 TCTTTACCTGGCTTCTAGGCCGCCAGGAAGCTGGCTGGGGC TCTTTACCTGGCTTCTAAGCCGCCAGGAAGCTGGCTGGGGC < 41bp 1 0.792171859372023 1 0.695564210414886 experiment 0.415656281255954 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DECR2 ENSG00000103202;ENSG00000242612 splicing Human other chr16:457427 chr16:457424 . 0.963 0 18 hm5C_associated_SNPs_30394 0 0 8 BUD13 POSTAR2 ENCODE chr16:457367-457456
64251 chr1 20977042 20977042 1 + C T MESO 20977032 + 20977012 20977052 41 ACAAGATGGTTGGCTGGCTCCTCCAACAATCGGCCGCCACT ACAAGATGGTTGGCTGGCTCCTCCAACAATTGGCCGCCACT < 41bp 1 0.716149517653329 1 0.965740919113159 experiment 0.567700964693342 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20977032 chr1:20977042 nonsynonymous SNV 0.278 4 31 hm5C_associated_SNPs_30395 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr1:20977002-20977052
64251 chr17 60768383 60768383 1 + C T MESO 60768363 + 60768343 60768383 41 TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGC TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGT < 41bp 1 0.0265555477537032 1 0.165976941585541 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768363 chr17:60768383 synonymous SNV . 0 41 hm5C_associated_SNPs_30400 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768364 + 60768344 60768384 41 GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCA GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGTA < 41bp 1 0.139997938090884 1 0.552106618881226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768364 chr17:60768383 synonymous SNV . 0 40 hm5C_associated_SNPs_30401 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768365 + 60768345 60768385 41 AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCAT AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGTAT < 41bp 1 0.22061854624745 1 0.760306835174561 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768365 chr17:60768383 synonymous SNV . 0 39 hm5C_associated_SNPs_30402 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768377 + 60768357 60768397 41 TGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA TGGGGGCCCCCGGGCTTGGGCCCCAGTATGCTGAGCCACAA < 41bp 1 0.484420377853201 1 0.176840007305145 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768377 chr17:60768383 synonymous SNV . 0 27 hm5C_associated_SNPs_30403 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768378 + 60768358 60768398 41 GGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC GGGGGCCCCCGGGCTTGGGCCCCAGTATGCTGAGCCACAAC < 41bp 1 0.162746930446427 1 0.224860161542892 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768378 chr17:60768383 synonymous SNV . 0 26 hm5C_associated_SNPs_30404 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768379 + 60768359 60768399 41 GGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA GGGGCCCCCGGGCTTGGGCCCCAGTATGCTGAGCCACAACA < 41bp 1 0.114618843866322 1 0.249751776456833 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768379 chr17:60768383 synonymous SNV . 0 25 hm5C_associated_SNPs_30405 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768383 60768383 1 + C T MESO 60768380 + 60768360 60768400 41 GGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG GGGCCCCCGGGCTTGGGCCCCAGTATGCTGAGCCACAACAG < 41bp 1 0.430530160741348 1 0.398550450801849 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768380 chr17:60768383 synonymous SNV . 0 24 hm5C_associated_SNPs_30406 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr11 73360064 73360064 1 + C T MESO 73360060 + 73360040 73360080 41 CGTGGCTCCTCTGACAGGTCCCGCCTGACTCCGCTCTGGAA CGTGGCTCCTCTGACAGGTCCCGCTTGACTCCGCTCTGGAA < 41bp 1 0.1449712076155 1 0.0519609153270721 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHB1 ENSG00000021300 CDS Human protein_coding chr11:73360060 chr11:73360064 nonsynonymous SNV 0.891 1 25 hm5C_associated_SNPs_30407 0 0 4 DDX3X POSTAR2 ENCODE chr11:73359967-73360077
64251 chr21 47978253 47978253 1 + C T MESO 47978252 + 47978232 47978272 41 AAGGACCTGGGCCTGCCGGCCCGCGCCGTAAGCACCACGTT AAGGACCTGGGCCTGCCGGCCTGCGCCGTAAGCACCACGTT < 41bp 1 0.555143702890129 1 0.767519235610962 experiment 0.889712594219741 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47978252 chr21:47978253 nonsynonymous SNV 0.131 4 22 hm5C_associated_SNPs_30408 0 0 4 BUD13 POSTAR2 ENCODE chr21:47978158-47978301
64251 chr22 44335969 44335969 1 + C T MESO 44335988 + 44335968 44336008 41 ACCCTGCCTGTGGAATCTGCCATTGCGATTGTCCAGAGGTG ATCCTGCCTGTGGAATCTGCCATTGCGATTGTCCAGAGGTG < 41bp 1 0.133464342183967 1 0.105139762163162 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44335988 chr22:44335969 nonsynonymous SNV 0.291 2 2 hm5C_associated_SNPs_30410 0 0 1 BUD13 POSTAR2 ENCODE chr22:44335958-44336020
64251 chr10 115485156 115485156 1 + G A OV 115485145 + 115485125 115485165 41 TGAAGAGGACCATACAAATGCCGCCTGCTTCGCCTGCATCC TGAAGAGGACCATACAAATGCCGCCTGCTTCACCTGCATCC < 41bp 1 0.23542097786475 1 0.107437163591385 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115485145 chr10:115485156 nonsynonymous SNV 0.996 3 32 hm5C_associated_SNPs_30411 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:115485151-115485169
64251 chr17 80193916 80193916 1 + C A OV 80193913 + 80193893 80193933 41 GGCCGTGGTGGACGAGGGCCCCACAGGCGTCAAGGCCCCTG GGCCGTGGTGGACGAGGGCCCCAAAGGCGTCAAGGCCCCTG < 41bp 1 0.574131888896664 1 0.156770437955856 experiment 0.851736222206673 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC16A3 ENSG00000141526 CDS Human protein_coding chr17:80193913 chr17:80193916 nonsynonymous SNV 0.732 0 24 hm5C_associated_SNPs_30412 0 0 6 DDX3X POSTAR2 ENCODE chr17:80193875-80193962
64251 chr5 17275538 17275538 1 + C T OV 17275552 + 17275532 17275572 41 GGAGGGCGAGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCC GGAGGGTGAGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCC < 41bp 1 0.783706435093263 1 0.529897153377533 experiment 0.432587129813474 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275552 chr5:17275538 synonymous SNV . 0 7 hm5C_associated_SNPs_30413 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:17275520-17275540
64251 chr8 104342099 104342099 1 + G A OV 104342108 + 104342088 104342128 41 CAAGAAACTTTGACAGAAATCCAAACCTCACCAGAAACATC CAAGAAACTTTAACAGAAATCCAAACCTCACCAGAAACATC < 41bp 1 0.286396302037432 1 0.0900390446186066 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342108 chr8:104342099 synonymous SNV . 0 12 hm5C_associated_SNPs_30414 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:104342076-104342099
64251 chr4 183696221 183696221 1 + G A OV 183696207 + 183696187 183696227 41 CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCGAGAA CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGACGAGAA < 41bp 1 0.346840837161249 1 0.16728475689888 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183696207 chr4:183696221 nonsynonymous SNV 0.934 2 35 hm5C_associated_SNPs_30415 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr4:183696220-183696240
64251 chr14 93681610 93681610 1 + A T OV 93681613 + 93681593 93681633 41 TTCTTTTTTGTGGGCTTATGCTGCACAATTGGCAGGTAGGT TTCTTTTTTGTGGGCTTTTGCTGCACAATTGGCAGGTAGGT < 41bp 1 0.747673721869849 1 0.426943868398666 experiment 0.504652556260301 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UBR7 ENSG00000012963 CDS Human protein_coding chr14:93681613 chr14:93681610 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_30416 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:93681585-93681618
64251 chr7 44804967 44804967 1 + G A OV 44804952 + 44804932 44804972 41 AGCTCTGACTATGAGGAGATCACCATCGACCCCACGTGCAG AGCTCTGACTATGAGGAGATCACCATCGACCCCACATGCAG < 41bp 1 0.635171244689567 1 0.067868560552597 experiment 0.729657510620866 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44804952 chr7:44804967 synonymous SNV . 0 36 hm5C_associated_SNPs_30419 0 0 6 BUD13 POSTAR2 ENCODE chr7:44804919-44804971
64251 chr20 60708486 60708486 1 + C G OV 60708483 + 60708463 60708503 41 TGGGACCACCCGTCGCAACCCCACTTCCCACAGGGCCGGGA TGGGACCACCCGTCGCAACCCCAGTTCCCACAGGGCCGGGA < 41bp 1 0.487450203522708 1 0.069589763879776 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60708483 chr20:60708486 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_30420 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:60708438-60708494
64251 chr17 78081608 78081608 1 + A T OV 78081601 + 78081581 78081621 41 GTCTCCTGCATGTCCCAGCCCGGTGCGAACCTCTACGGGTC GTCTCCTGCATGTCCCAGCCCGGTGCGTACCTCTACGGGTC < 41bp 1 0.493043692933063 1 0.441283524036407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78081601 chr17:78081608 nonsynonymous SNV 0.651 5 28 hm5C_associated_SNPs_30421 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78081582-78081620
64251 chr11 45827584 45827584 1 + T G OV 45827586 + 45827566 45827606 41 ACCCCCATCTTCGTCACCTTCTACCAGTGCCTGGTGACCAC ACCCCCATCTTCGTCACCGTCTACCAGTGCCTGGTGACCAC < 41bp 1 0.365441037028525 1 0.109261393547058 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45827586 chr11:45827584 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_30422 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:45827542-45827591
64251 chr17 37676222 37676222 1 + G A OV 37676240 + 37676220 37676260 41 CAGCACTTGATTTATTGGACCACATGCTGACACTAGATCCT CAACACTTGATTTATTGGACCACATGCTGACACTAGATCCT < 41bp 1 0.125709013427674 1 0.0368230938911438 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676240 chr17:37676222 nonsynonymous SNV 0.998 4 3 hm5C_associated_SNPs_30423 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37676212-37676254
64251 chr3 124456804 124456804 1 + C G OV 124456785 + 124456765 124456805 41 GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCC GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGGC < 41bp 1 0.386503877125159 1 0.779657959938049 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UMPS ENSG00000114491 CDS Human protein_coding chr3:124456785 chr3:124456804 nonsynonymous SNV 0.990 1 40 hm5C_associated_SNPs_30424 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:124456779-124456835
64251 chr22 39770463 39770463 1 + C A OV 39770450 + 39770430 39770470 41 ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTCACCTGCCTG ATGGCGTGGCCGTGGGCGTGCTCGCCTTCCTCAACTGCCTG < 41bp 1 0.541026042730758 1 0.102213442325592 experiment 0.917947914538483 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39770450 chr22:39770463 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_30425 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39770430-39770489
64251 chr1 153724880 153724880 1 + C T OV 153724860 + 153724840 153724880 41 AAGATATTATCCATAATCCTCAGGCCTTGAGTCCTCAGTTC AAGATATTATCCATAATCCTCAGGCCTTGAGTCCTCAGTTT < 41bp 1 0.583441973944019 1 0.801113128662109 experiment 0.833116052111963 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout INTS3 ENSG00000143624 CDS Human protein_coding chr1:153724860 chr1:153724880 synonymous SNV . 0 41 hm5C_associated_SNPs_30427 0 0 4 GPKOW POSTAR2 ENCODE chr1:153724852-153724951
64251 chr16 85840440 85840440 1 + C T OV 85840456 + 85840436 85840476 41 TTAGCCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAGAA TTAGTCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAGAA < 41bp 1 0.78100963982992 1 0.437134861946106 experiment 0.43798072034016 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840456 chr16:85840440 nonsynonymous SNV 0.044 2 5 hm5C_associated_SNPs_30428 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:85840369-85840440
64251 chr12 95877020 95877020 1 + G A OV 95877015 + 95876995 95877035 41 AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA AGATGGCGATGGAGATGGAGCAACTAGAAAGAAGAAGAAAA < 41bp 1 0.299057713578877 1 0.321467399597168 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877015 chr12:95877020 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_30429 0 0 28 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:95876980-95877020
64251 chr12 95877020 95877020 1 + G A OV 95877018 + 95876998 95877038 41 TGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAAAGA TGGCGATGGAGATGGAGCAACTAGAAAGAAGAAGAAAAAGA < 41bp 1 0.747459200087246 1 0.442382544279099 experiment 0.505081599825507 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877018 chr12:95877020 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_30430 0 0 28 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:95876980-95877020
64251 chr3 49049428 49049428 1 + G A OV 49049444 + 49049424 49049464 41 CCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT CCCTACACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT < 41bp 1 0.0470454762027544 1 0.0386441946029663 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049444 chr3:49049428 nonsynonymous SNV 0.998 4 5 hm5C_associated_SNPs_30431 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:49049420-49049440
64251 chr6 27806753 27806753 1 + G A OV 27806746 + 27806726 27806766 41 AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG AGACGGCCGTGCGCCTGCTGCTGCCAGAGGAGCTGGCCAAG < 41bp 1 0.606388363534348 1 0.259109437465668 experiment 0.787223272931303 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806746 chr6:27806753 nonsynonymous SNV 0.970 3 28 hm5C_associated_SNPs_30432 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806700-27806760
64251 chr12 123087765 123087765 1 + C T OV 123087749 + 123087729 123087769 41 TATAGTCAACCCAGAGTGGGCTGTAGCTATTGCCATCAGCC TATAGTCAACCCAGAGTGGGCTGTAGCTATTGCCATTAGCC < 41bp 1 0.274374444707651 1 0.140263319015503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123087749 chr12:123087765 synonymous SNV . 0 37 hm5C_associated_SNPs_30433 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:123087743-123087770
64251 chr12 123087765 123087765 1 + C T OV 123087775 + 123087755 123087795 41 CTATTGCCATCAGCCTTGCCCAGGATATCCCTGAAGGTATG CTATTGCCATTAGCCTTGCCCAGGATATCCCTGAAGGTATG < 41bp 1 0.586275065351658 1 0.630870640277863 experiment 0.827449869296683 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123087775 chr12:123087765 synonymous SNV . 0 11 hm5C_associated_SNPs_30434 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:123087743-123087770
64251 chr20 57484839 57484839 1 + C G OV 57484828 + 57484808 57484848 41 CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC CCAACCGCCTGCAGGAGGCTCTGAACCTCTTGAAGAGCATC < 41bp 1 0.394029923604322 1 0.164883702993393 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GNAS ENSG00000087460 CDS Human protein_coding chr20:57484828 chr20:57484839 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_30436 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57484779-57484852
64251 chr16 14041547 14041547 1 + G A OV 14041557 + 14041537 14041577 41 TTCCATCTCTGATCCATCGTCGGGGCATTGACATTGAACCC TTCCATCTCTAATCCATCGTCGGGGCATTGACATTGAACCC < 41bp 1 0.73706279041599 1 0.947102904319763 experiment 0.52587441916802 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14041557 chr16:14041547 synonymous SNV . 0 11 hm5C_associated_SNPs_30437 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:14041535-14041561
64251 chr17 45757955 45757955 1 + G T OV 45757956 + 45757936 45757976 41 ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACAAA ATGAATTGTTAACTGAAGGTCGGAGATCGAAGACTAACAAA < 41bp 1 0.493227770190292 1 0.348828375339508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757956 chr17:45757955 synonymous SNV . 0 20 hm5C_associated_SNPs_30439 0 0 58 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr12 57552345 57552345 1 + C G OV 57552333 + 57552313 57552353 41 CTGGACTTCCACGCTGAGACCGGCTTCATCTACTTTGCCGA CTGGACTTCCACGCTGAGACCGGCTTCATCTAGTTTGCCGA < 41bp 1 0.117729867926037 1 0.430972397327423 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57552333 chr12:57552345 stopgain 1.000 1 33 hm5C_associated_SNPs_30440 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:57552345-57552346
64251 chr12 98995251 98995251 1 + C A OV 98995269 + 98995249 98995289 41 CCCTCCTCCACCCGAGATGCCAGAGTCTCTGAAGAAGAAGC CCATCCTCCACCCGAGATGCCAGAGTCTCTGAAGAAGAAGC < 41bp 1 0.539408803231231 1 0.223956912755966 experiment 0.921182393537538 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995269 chr12:98995251 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_30441 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr14 64689991 64689991 1 + G A OV 64690010 + 64689990 64690030 41 TGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTA TAGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTA < 41bp 1 0.2709344923586 1 0.335269004106522 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64690010 chr14:64689991 nonsynonymous SNV 0.752 3 2 hm5C_associated_SNPs_30442 0 0 4 DGCR8 POSTAR2 GSE39086,GSM955512 chr14:64689980-64690000
64251 chr5 92921091 92921091 1 + C T OV 92921110 + 92921090 92921130 41 ACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA ATATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA < 41bp 1 0.0834607286244176 1 0.102384060621262 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92921110 chr5:92921091 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_30443 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:92921049-92921095
64251 chr5 92921119 92921119 1 + C T OV 92921110 + 92921090 92921130 41 ACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA ACATGCCGTGCCAACAGGAACTGTCCCATTGACCAGCACCA < 41bp 1 0.0759836856103022 1 0.172945290803909 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92921110 chr5:92921119 synonymous SNV . 0 30 hm5C_associated_SNPs_30444 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:92921080-92921120
64251 chr5 92921123 92921123 1 + C T OV 92921110 + 92921090 92921130 41 ACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA ACATGCCGTGCCAACAGGAACTGTCCCATCGACTAGCACCA < 41bp 1 0.0862957267799983 1 0.173048168420792 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92921110 chr5:92921123 stopgain 1.000 1 34 hm5C_associated_SNPs_30445 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:92921120-92921141
64251 chr4 42020141 42020141 1 + C T OV 42020143 + 42020123 42020163 41 TACAGCAGAAGGTATAGGCACAGAACTCAAAGCTCCACTTA TACAGCAGAAGGTATAGGTACAGAACTCAAAGCTCCACTTA < 41bp 1 0.70149170268735 1 0.418009370565414 experiment 0.597016594625299 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42020143 chr4:42020141 synonymous SNV . 0 19 hm5C_associated_SNPs_30446 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:42020116-42020166
64251 chr3 155629028 155629028 1 + T A OV 155629040 + 155629020 155629060 41 AGCCAGTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA AGCCAGTCAGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA < 41bp 1 0.108401072204845 1 0.0425854921340942 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155629040 chr3:155629028 synonymous SNV . 0 9 hm5C_associated_SNPs_30447 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155629005-155629070
64251 chr6 27861593 27861593 1 + C G OV 27861587 + 27861567 27861607 41 GCACGCCGTGTCCGAGGGCACAAAGGCCGTCACCAAGTACA GCACGCCGTGTCCGAGGGCACAAAGGGCGTCACCAAGTACA < 41bp 1 0.691776890753107 1 0.501249313354492 experiment 0.616446218493787 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HIST1H2BO ENSG00000196331 CDS Human other chr6:27861587 chr6:27861593 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_30448 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27861520-27861640
64251 chr16 81077192 81077192 1 + G T OV 81077198 + 81077178 81077218 41 GCTTGCTCTCTTAAGGAGAGCCTACCTCTTTTCAAAATTGC GCTTGCTCTCTTAATGAGAGCCTACCTCTTTTCAAAATTGC < 41bp 1 0.0143450679594221 1 0.0613050162792206 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077198 chr16:81077192 nonsynonymous SNV 0.077 2 15 hm5C_associated_SNPs_30449 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:81077149-81077216
64251 chr7 56129521 56129521 1 + G C OV 56129510 + 56129490 56129530 41 TCAAGCAGAACATTCAGAATCAGGTCAGCTTGTGGGTGTGG TCAAGCAGAACATTCAGAATCAGGTCAGCTTCTGGGTGTGG < 41bp 1 0.575634430824163 1 0.443491965532303 experiment 0.848731138351674 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56129510 chr7:56129521 nonsynonymous SNV 0.994 0 32 hm5C_associated_SNPs_30453 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:56129469-56129544
64251 chr8 56922484 56922484 1 + G A OV 56922491 + 56922471 56922511 41 AACTAATGCCGACGTGATGACCGCCCTGTCCCAGGGCTACA AACTAATGCCGACATGATGACCGCCCTGTCCCAGGGCTACA < 41bp 1 0.186081681612634 1 0.0170888304710388 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56922491 chr8:56922484 nonsynonymous SNV 0.823 5 14 hm5C_associated_SNPs_30455 0 0 3 FMR1 POSTAR2 ENCODE chr8:56922467-56922550
64251 chr6 168352576 168352576 1 + G A OV 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA TCCTCAGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.177232331961597 1 0.288018554449081 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352576 synonymous SNV . 0 6 hm5C_associated_SNPs_30456 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr6 168352576 168352576 1 + G A OV 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTCAGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC < 41bp 1 0.526644706991871 1 0.490777850151062 experiment 0.946710586016257 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352576 synonymous SNV . 0 5 hm5C_associated_SNPs_30457 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr6 168352576 168352576 1 + G A OV 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTCAGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG < 41bp 1 0.0704065678155607 1 0.272766053676605 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352576 synonymous SNV . 0 4 hm5C_associated_SNPs_30458 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr2 177015082 177015082 1 + G T OV 177015069 + 177015049 177015089 41 TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGT TCTATATATACCCTGTAGAACCGAATTTGTGTGTTATCCGT < 41bp 1 0.630912902632524 1 0.0454921722412109 experiment 0.738174194734951 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015069 chr2:177015082 . . 0 34 hm5C_associated_SNPs_30459 0 0 9 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr2 177015082 177015082 1 + G T OV 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAGAACCGAATTTGTGTGTTATCCGTA < 41bp 1 0.425655661947764 1 0.0922767817974091 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015082 . . 0 33 hm5C_associated_SNPs_30460 0 0 9 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr16 72141619 72141619 1 + C T OV 72141626 + 72141606 72141646 41 ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT ATGCTCATCGTGTTCTGTGACATGGGCTGCAGCTCCGAGAT < 41bp 1 0.689483317337063 1 0.286730527877808 experiment 0.621033365325875 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141626 chr16:72141619 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_30466 0 0 1 FXR2 POSTAR2 ENCODE chr16:72141579-72141657
64251 chr5 68425367 68425367 1 + G T OV 68425373 + 68425353 68425393 41 CTGGCCTAAGTACTGGATTTCATGATGTTCTGGCTATGACA CTGGCCTAAGTACTTGATTTCATGATGTTCTGGCTATGACA < 41bp 1 0.545547581300462 1 0.173624485731125 experiment 0.908904837399076 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68425373 chr5:68425367 stopgain 1.000 1 15 hm5C_associated_SNPs_30467 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68425346-68425374
64251 chr17 7479928 7479928 1 + G A OV 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTAC < 41bp 1 0.12988419285194 1 0.158226490020752 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479928 synonymous SNV . 0 40 hm5C_associated_SNPs_30468 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479928 7479928 1 + G A OV 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTACA < 41bp 1 0.411052555360853 1 0.206307917833328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479928 synonymous SNV . 0 39 hm5C_associated_SNPs_30469 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr8 22037887 22037887 1 + G T OV 22037894 + 22037874 22037914 41 CTCACAGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA CTCACAGCCTGTGTAGAGACCCTGCAAGACAGCACAGGCAA < 41bp 1 0.0883009039517002 1 0.0991290807723999 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22037894 chr8:22037887 nonsynonymous SNV 0.982 3 14 hm5C_associated_SNPs_30470 0 0 1 DDX24 POSTAR2 ENCODE chr8:22037877-22037894
64251 chr9 6498130 6498130 1 + G A OV 6498113 + 6498093 6498133 41 GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTC GTTGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACAGTC < 41bp 1 0.391342105791895 1 0.130419254302979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498113 chr9:6498130 nonsynonymous SNV 0.991 4 38 hm5C_associated_SNPs_30471 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr9 6498130 6498130 1 + G A OV 6498115 + 6498095 6498135 41 TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACGGTCAA TGAACCTGCTCCTTGGACCTCTGAAGGAATAGAACAGTCAA < 41bp 1 0.708756044061127 1 0.752581000328064 experiment 0.582487911877746 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6498115 chr9:6498130 nonsynonymous SNV 0.991 4 36 hm5C_associated_SNPs_30472 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:6498116-6498152
64251 chr8 77620183 77620183 1 + A T OV 77620172 + 77620152 77620192 41 TTGAAGTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG TTGAAGTGTATTGCCATTGGCAACCCTGTTCTCCTAAAATG < 41bp 1 0.0976086434654101 1 0.0693716108798981 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77620172 chr8:77620183 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_30473 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:77620157-77620185
64251 chr16 28845928 28845928 1 + C G OV 28845926 + 28845906 28845946 41 CCCGCCTCTGGTGGCTGCCACGCCCTATTCTTCCTACATCC CCCGCCTCTGGTGGCTGCCACGGCCTATTCTTCCTACATCC < 41bp 1 0.509086596052314 1 0.87845778465271 experiment 0.981826807895372 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845926 chr16:28845928 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_30474 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:28845901-28845933
64251 chr3 14712636 14712636 1 + C G OV 14712656 + 14712636 14712676 41 CAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT GAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT < 41bp 1 0.484089947872725 1 0.55262154340744 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712656 chr3:14712636 nonsynonymous SNV 0.928 1 1 hm5C_associated_SNPs_30476 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:14712578-14712638
64251 chr11 66391988 66391988 1 + G T OV 66391986 + 66391966 66392006 41 CCACCCTTCTTTGGTCGCGACCGCAGCCCTCTGCGCCGTTC CCACCCTTCTTTGGTCGCGACCTCAGCCCTCTGCGCCGTTC < 41bp 1 0.196716318886168 1 0.0549347698688507 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM14 ENSG00000239306 CDS Human protein_coding chr11:66391986 chr11:66391988 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_30477 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:66391960-66392060
64251 chr19 54377047 54377047 1 + C T OV 54377053 + 54377033 54377073 41 ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC ATCGTGGAGCTGTGTGGGCTCCAGGCCCGCTTCCCCCTGTC < 41bp 1 0.667272791954517 1 0.882266163825989 experiment 0.665454416090966 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377053 chr19:54377047 synonymous SNV . 0 15 hm5C_associated_SNPs_30481 0 0 4 IGF2BP1 POSTAR2 ENCODE chr19:54376999-54377063
64251 chr4 119200397 119200397 1 + G T OV 119200377 + 119200357 119200397 41 TTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATG TTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATT < 41bp 1 0.057824219398525 1 0.0369261503219604 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200377 chr4:119200397 . . 0 41 hm5C_associated_SNPs_30482 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200381 + 119200361 119200401 41 GACCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAG GACCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAG < 41bp 1 0.262425104676178 1 0.380262136459351 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200381 chr4:119200397 . . 0 37 hm5C_associated_SNPs_30483 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200383 + 119200363 119200403 41 CCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAG CCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAGAG < 41bp 1 0.119613053439677 1 0.20463690161705 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200383 chr4:119200397 . . 0 35 hm5C_associated_SNPs_30484 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200384 + 119200364 119200404 41 CTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGC CTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAGAGC < 41bp 1 0.0191221503960095 1 0.112783163785934 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200384 chr4:119200397 . . 0 34 hm5C_associated_SNPs_30485 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200385 + 119200365 119200405 41 TGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCA TGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAGAGCA < 41bp 1 0.182563719975757 1 0.404353976249695 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200385 chr4:119200397 . . 0 33 hm5C_associated_SNPs_30486 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200388 + 119200368 119200408 41 CAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATAT CAGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAGAGCATAT < 41bp 1 0.0433657156539464 1 0.393951714038849 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200388 chr4:119200397 . . 0 30 hm5C_associated_SNPs_30487 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr4 119200397 119200397 1 + G T OV 119200389 + 119200369 119200409 41 AGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATATC AGCCGTGGCAGTCTCCCTTCCTAGCCATTGAAGAGCATATC < 41bp 1 0.228857345923641 1 0.100559741258621 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200389 chr4:119200397 . . 0 29 hm5C_associated_SNPs_30488 0 0 23 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:119200380-119200400
64251 chr9 125154768 125154768 1 + C T OV 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCTGGATGCCA < 41bp 1 0.0172369531582477 1 0.0425218641757965 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154768 nonsynonymous SNV 0.150 4 33 hm5C_associated_SNPs_30489 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr19 21301008 21301008 1 + A G OV 21300990 + 21300970 21301010 41 AATTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACA AATTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAGCA < 41bp 1 0.394777041467099 1 0.154471874237061 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300990 chr19:21301008 nonsynonymous SNV 0.002 0 39 hm5C_associated_SNPs_30490 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21300992 + 21300972 21301012 41 TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACT TTCAGCAGGGCATGGTGGCTCATGCCTGTAATCCCAGCACT < 41bp 1 0.292598018266555 1 0.14927265048027 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300992 chr19:21301008 nonsynonymous SNV 0.002 0 37 hm5C_associated_SNPs_30491 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21300996 + 21300976 21301016 41 GCAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGA GCAGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGA < 41bp 1 0.180275550482847 1 0.0513757467269897 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300996 chr19:21301008 nonsynonymous SNV 0.002 0 33 hm5C_associated_SNPs_30492 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21300997 + 21300977 21301017 41 CAGGGCATGGTGGCTCATGCCTGTAATCCCAACACTTTGAG CAGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGAG < 41bp 1 0.606064085345647 1 0.0854746997356415 experiment 0.787871829308706 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300997 chr19:21301008 nonsynonymous SNV 0.002 0 32 hm5C_associated_SNPs_30493 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21301004 + 21300984 21301024 41 TGGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTA TGGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGACTA < 41bp 1 0.335357089981492 1 0.0986745059490204 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301004 chr19:21301008 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_30494 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21301005 + 21300985 21301025 41 GGTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAG GGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGACTAG < 41bp 1 0.166878903241967 1 0.182867079973221 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301005 chr19:21301008 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_30495 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr19 21301008 21301008 1 + A G OV 21301006 + 21300986 21301026 41 GTGGCTCATGCCTGTAATCCCAACACTTTGAGAGGACTAGG GTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGACTAGG < 41bp 1 0.749766817056225 1 0.195116370916367 experiment 0.50046636588755 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301006 chr19:21301008 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_30496 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:21301007-21301032
64251 chr12 108961085 108961085 1 + G T OV 108961066 + 108961046 108961086 41 TAAGTCTCTGCTCTCCATACCAGTCAGCTGGGACATTTGGC TAAGTCTCTGCTCTCCATACCAGTCAGCTGGGACATTTGTC < 41bp 1 0.0687144378425851 1 0.261666536331177 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ISCU ENSG00000136003 CDS Human protein_coding chr12:108961066 chr12:108961085 nonsynonymous SNV 0.004 1 40 hm5C_associated_SNPs_30497 0 0 2 PRPF8 POSTAR2 ENCODE chr12:108961028-108961126
64251 chr10 43292224 43292224 1 + G T OV 43292225 + 43292205 43292245 41 GACGATGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC GACGATGACCTTGAGAGGATCTCAGCGGAAGAAGGGGAAGC < 41bp 1 0.452631537077902 1 0.302004545927048 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292225 chr10:43292224 nonsynonymous SNV 0.757 2 20 hm5C_associated_SNPs_30498 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr10 43292224 43292224 1 + G T OV 43292230 + 43292210 43292250 41 TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG TGACCTTGAGAGGATCTCAGCGGAAGAAGGGGAAGCGGAGG < 41bp 1 0.796351830527074 1 0.776522219181061 experiment 0.407296338945853 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292230 chr10:43292224 nonsynonymous SNV 0.757 2 15 hm5C_associated_SNPs_30499 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr15 69747810 69747810 1 + G C OV 69747803 + 69747783 69747823 41 GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA GGAAGCAAAGAAAGAAGAATCCGAGGACTCTGATGATGACA < 41bp 1 0.338203541775551 1 0.529609978199005 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747803 chr15:69747810 nonsynonymous SNV 0.981 1 28 hm5C_associated_SNPs_30500 0 0 64 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:69747760-69747820
64251 chr15 69747810 69747810 1 + G C OV 69747822 + 69747802 69747842 41 TCCGAGGAGTCTGATGATGACATGGGCTTTGGTCTTTTTGA TCCGAGGACTCTGATGATGACATGGGCTTTGGTCTTTTTGA < 41bp 1 0.386604609537226 1 0.502996385097504 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747822 chr15:69747810 nonsynonymous SNV 0.981 1 9 hm5C_associated_SNPs_30501 0 0 64 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:69747760-69747820
64251 chr9 131847014 131847014 1 + G C OV 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTCACCCT < 41bp 1 0.536841728259266 1 0.206163048744202 experiment 0.926316543481469 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131847014 synonymous SNV . 0 36 hm5C_associated_SNPs_30502 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr9:131846992-131847023
64251 chr7 75932058 75932058 1 + T A OV 75932069 + 75932049 75932089 41 CCTTCTCGCTCCTGCGGGGCCCCAGCTGGGACCCCTTCCGC CCTTCTCGCACCTGCGGGGCCCCAGCTGGGACCCCTTCCGC < 41bp 1 0.547595909852528 1 0.335690677165985 experiment 0.904808180294944 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932069 chr7:75932058 nonsynonymous SNV 0.999 3 10 hm5C_associated_SNPs_30503 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr7 75932058 75932058 1 + T A OV 75932070 + 75932050 75932090 41 CTTCTCGCTCCTGCGGGGCCCCAGCTGGGACCCCTTCCGCG CTTCTCGCACCTGCGGGGCCCCAGCTGGGACCCCTTCCGCG < 41bp 1 0.416013690314037 1 0.462096571922302 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75932070 chr7:75932058 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_30504 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75932011-75932090
64251 chr12 109961915 109961915 1 + A T OV 109961906 + 109961886 109961926 41 ACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGGTGAGC ACTCCGAGTTCTATAAAAACCTCACCTCCTTCAAGGTGAGC < 41bp 1 0.197398291738506 1 0.0463142096996307 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3B ENSG00000151148 CDS Human protein_coding chr12:109961906 chr12:109961915 nonsynonymous SNV 0.936 4 30 hm5C_associated_SNPs_30506 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109961893-109961920
64251 chr12 109961915 109961915 1 + A T OV 109961913 + 109961893 109961933 41 GTTCTATAAAAACCTCACCTCCATCAAGGTGAGCATGGAAT GTTCTATAAAAACCTCACCTCCTTCAAGGTGAGCATGGAAT < 41bp 1 0.012326241552139 1 0.103069245815277 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3B ENSG00000151148 CDS Human protein_coding chr12:109961913 chr12:109961915 nonsynonymous SNV 0.936 4 23 hm5C_associated_SNPs_30507 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109961893-109961920
64251 chrX 129185903 129185903 1 + G A OV 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACAATCCGATG < 41bp 1 0.71943760908121 1 0.878881990909576 experiment 0.56112478183758 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185903 nonsynonymous SNV 0.755 2 33 hm5C_associated_SNPs_30508 0 0 1 DDX24 POSTAR2 ENCODE chrX:129185902-129185992
64251 chr17 46136559 46136559 1 + C T OV 46136553 + 46136533 46136573 41 CGAGCCCGAGCCATGAAGATCCCTTTCACCAATGACAAAAT CGAGCCCGAGCCATGAAGATCCCTTTTACCAATGACAAAAT < 41bp 1 0.0529057874650665 1 0.0509778261184692 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46136553 chr17:46136559 synonymous SNV . 0 27 hm5C_associated_SNPs_30509 0 0 14 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:46136534-46136566
64251 chr6 26252061 26252061 1 + G C OV 26252046 + 26252026 26252066 41 CACCCCGACACCGGCATCTCCTCCAAAGCCATGGGGATCAT CACCCCGACACCGGCATCTCCTCCAAAGCCATGGGCATCAT < 41bp 1 0.791232561878059 1 0.97499406337738 experiment 0.417534876243883 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIST1H2BH ENSG00000197459 CDS Human other chr6:26252046 chr6:26252061 synonymous SNV . 0 36 hm5C_associated_SNPs_30510 0 0 2 RPS3 POSTAR2 ENCODE chr6:26252051-26252223
64251 chr19 54711374 54711374 1 + C T OV 54711362 + 54711342 54711382 41 CGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAG CGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGTGTGAAGAG < 41bp 1 0.358800510275462 1 0.304022490978241 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711362 chr19:54711374 synonymous SNV . 0 33 hm5C_associated_SNPs_30513 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54711299-54711392
64251 chr19 54711374 54711374 1 + C T OV 54711363 + 54711343 54711383 41 GCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGG GCTCTCCCTACGGGGGTGGCCGCCCGGGCCGTGTGAAGAGG < 41bp 1 0.615417852305446 1 0.427039951086044 experiment 0.769164295389109 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711363 chr19:54711374 synonymous SNV . 0 32 hm5C_associated_SNPs_30514 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54711299-54711392
64251 chr8 48883166 48883166 1 + C T OV 48883170 + 48883150 48883190 41 ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG ACATCTTGCTGTGTGGTGACCCTGGTACCAGCAAGTCCCAG < 41bp 1 0.339892018915055 1 0.230674833059311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883170 chr8:48883166 synonymous SNV . 0 17 hm5C_associated_SNPs_30515 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr8:48883075-48883173
64251 chr10 103912171 103912171 1 + G A OV 103912153 + 103912133 103912173 41 CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGATGGCG CGTCGACAACGGTAGTGACGCGTATTGCCTGGAGGATGACG < 41bp 1 0.384981311145527 1 0.0305895209312439 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912153 chr10:103912171 nonsynonymous SNV 0.991 4 39 hm5C_associated_SNPs_30516 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:103912122-103912178
64251 chr16 8735028 8735028 1 + C T OV 8735032 + 8735012 8735052 41 TGGACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTC TGGACTGGCTGAAGGATGACCTCTGCACAGGTGTGTGTTTC < 41bp 1 0.254262150330143 1 0.510338008403778 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735032 chr16:8735028 synonymous SNV . 0 17 hm5C_associated_SNPs_30517 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8734998-8735039
64251 chr5 65118659 65118659 1 + C T OV 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTCTGGATGGCATGGACATGC < 41bp 1 0.377656861313105 1 0.227969527244568 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118659 synonymous SNV . 0 28 hm5C_associated_SNPs_30519 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chr20 39977793 39977793 1 + G A OV 39977802 + 39977782 39977822 41 ACTCGGATGGCGAGTGGCCCCCCCAGGCCAGGTAAGAGTCC ACTCGGATGGCAAGTGGCCCCCCCAGGCCAGGTAAGAGTCC < 41bp 1 0.515970835326217 1 0.358942210674286 experiment 0.968058329347566 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39977802 chr20:39977793 nonsynonymous SNV 0.946 4 12 hm5C_associated_SNPs_30520 0 0 5 BUD13 POSTAR2 ENCODE chr20:39977789-39977812
64251 chrX 106046121 106046121 1 + C T OV 106046129 + 106046109 106046149 41 TTCTGAAAAATGCGCTGAAGCTGTGGCTGATGGAAAGGTCC TTCTGAAAAATGTGCTGAAGCTGTGGCTGATGGAAAGGTCC < 41bp 1 0.54849851549321 1 0.153141409158707 experiment 0.90300296901358 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TBC1D8B ENSG00000133138 CDS Human protein_coding chrX:106046129 chrX:106046121 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_30522 0 0 2 EIF3H POSTAR2 ENCODE chrX:106046044-106046124
64251 chr2 169551529 169551529 1 + A T OV 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTGTTGTTTTCTCAGTTCACTGATATCAAAA < 41bp 1 0.518472549290156 1 0.640818953514099 experiment 0.963054901419688 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551529 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_30523 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:169551487-169551530
64251 chr9 131010999 131010999 1 + G A OV 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACCGTGAGGGACCTCATACCCAAGACCATCATG < 41bp 1 0.338254949516467 1 0.0706710815429688 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131010999 nonsynonymous SNV 0.999 1 26 hm5C_associated_SNPs_30524 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr7 819707 819707 1 + G T OV 819711 + 819691 819731 41 TCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT TCCTACTATCAGAGCATTGTCCAGTACCTGTACCGAGAGTT < 41bp 1 0.198587956991148 1 0.331994831562042 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819711 chr7:819707 nonsynonymous SNV 0.139 1 17 hm5C_associated_SNPs_30525 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:819697-819722
64251 chr10 60549137 60549137 1 + T A OV 60549151 + 60549131 60549171 41 TTTCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT TTTCAGAATCATTTAAACAGCGTTCCCGAATGTATGGTGCT < 41bp 1 0.0161586778205483 1 0.0459296107292175 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549151 chr10:60549137 nonsynonymous SNV 0.995 4 7 hm5C_associated_SNPs_30526 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60549137-60549216
64251 chr2 169551528 169551528 1 + G C OV 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTCATGTTTTCTCAGTTCACTGATATCAAAA < 41bp 1 0.455327899469119 1 0.252409338951111 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551528 nonsynonymous SNV 0.999 5 13 hm5C_associated_SNPs_30527 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:169551487-169551530
64251 chr10 75520017 75520017 1 + G C OV 75520010 + 75519990 75520030 41 TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC TGGACAGAGTTTTGGAGGGCCCTCAGTCAGCCAGCCCAACC < 41bp 1 0.264717861795607 1 0.02411288022995 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520010 chr10:75520017 synonymous SNV . 0 28 hm5C_associated_SNPs_30528 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:75519988-75520026
64251 chr7 43990227 43990227 1 + G A OV 43990229 + 43990209 43990249 41 ATCTGCTCGCTGCTCTGCGACCCCAACCCCGATGACCCCCT ATCTGCTCGCTGCTCTGCAACCCCAACCCCGATGACCCCCT < 41bp 1 0.61078911311789 1 0.0782686173915863 experiment 0.778421773764219 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2D4 ENSG00000078967 CDS Human protein_coding chr7:43990229 chr7:43990227 nonsynonymous SNV 0.965 2 19 hm5C_associated_SNPs_30529 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:43990205-43990239
64251 chr19 10789834 10789834 1 + C G OV 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG GTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG < 41bp 1 0.0967819338719398 1 0.0768981873989105 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789834 nonsynonymous SNV 0.936 1 1 hm5C_associated_SNPs_30530 0 0 25 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr13 26956987 26956987 1 + G C OV 26956984 + 26956964 26957004 41 TTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA TTTTAGTTATGGGTGAAGGTCCTCAGCGAGGAAGAGTAAAA < 41bp 1 0.140938686257048 1 0.0430678129196167 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26956984 chr13:26956987 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_30531 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr13:26956960-26956994
64251 chr1 162469786 162469786 1 + G A OV 162469797 + 162469777 162469817 41 TCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCT TCTCCAAATATGCCATCACGCTGTCTGTTGCTTGAACTCCT < 41bp 1 0.273164448004523 1 0.298794567584991 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162469797 chr1:162469786 nonsynonymous SNV 0.997 0 10 hm5C_associated_SNPs_30532 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469758-162469829
64251 chr6 43143543 43143543 1 + G C OV 43143562 + 43143542 43143582 41 CGGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGT CCGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGT < 41bp 1 0.0432828714241911 1 0.10919725894928 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143562 chr6:43143543 nonsynonymous SNV 0.992 4 2 hm5C_associated_SNPs_30533 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr6 43143543 43143543 1 + G C OV 43143563 + 43143543 43143583 41 GGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTC CGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTC < 41bp 1 0.123937736060202 1 0.046401172876358 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143563 chr6:43143543 nonsynonymous SNV 0.992 4 1 hm5C_associated_SNPs_30534 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr6 43143544 43143544 1 + G T OV 43143562 + 43143542 43143582 41 CGGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGT CGTCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGT < 41bp 1 0.046649026942986 1 0.136949390172958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143562 chr6:43143544 nonsynonymous SNV 0.995 4 3 hm5C_associated_SNPs_30535 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr6 43143544 43143544 1 + G T OV 43143563 + 43143543 43143583 41 GGCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTC GTCCCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTC < 41bp 1 0.148592108091549 1 0.039557158946991 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143563 chr6:43143544 nonsynonymous SNV 0.995 4 2 hm5C_associated_SNPs_30536 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43143538-43143578
64251 chr2 48033355 48033355 1 + C G OV 48033370 + 48033350 48033390 41 TACTGCAACATTTGATGGGACGGCAATAGCAAATGCAGTTG TACTGGAACATTTGATGGGACGGCAATAGCAAATGCAGTTG < 41bp 1 0.700652324803344 1 0.14603978395462 experiment 0.598695350393313 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48033370 chr2:48033355 nonsynonymous SNV 0.993 5 6 hm5C_associated_SNPs_30537 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:48033340-48033360
64251 chrX 110954936 110954936 1 + C T OV 110954916 + 110954896 110954936 41 TTTGAAGTATGTGGAGGGATCTTTTGAGAAATACCTGGAAC TTTGAAGTATGTGGAGGGATCTTTTGAGAAATACCTGGAAT < 41bp 1 0.14598716180263 1 0.0641109347343445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110954916 chrX:110954936 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_30538 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:110954923-110954953
64251 chr8 22064471 22064471 1 + A T OV 22064464 + 22064444 22064484 41 AAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACCG AAGGAGTGCACGTGGGCCATCTCCAGCTCCCCCGGGCACCG < 41bp 1 0.708090141748069 1 0.792576313018799 experiment 0.583819716503862 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064464 chr8:22064471 nonsynonymous SNV 0.998 3 28 hm5C_associated_SNPs_30539 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:22064444-22064479
64251 chr6 7226808 7226808 1 + G C OV 7226819 + 7226799 7226839 41 TTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACG TTTCATACACAACAACCCTTCAATTCCTGCTGGCTTCCACG < 41bp 1 0.0288400157080821 1 0.125886708498001 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7226819 chr6:7226808 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_30544 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:7226785-7226808
64251 chr7 101845130 101845130 1 + G A OV 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAAAAGGGCAG < 41bp 1 0.350070209005112 1 0.600782811641693 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845130 synonymous SNV . 0 33 hm5C_associated_SNPs_30555 0 0 6 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr12 100732643 100732643 1 + A G OV 100732627 + 100732607 100732647 41 ACTTCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAG ACTTCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAGGCAG < 41bp 1 0.232511850607778 1 0.0538118481636047 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732627 chr12:100732643 nonsynonymous SNV 0.782 0 37 hm5C_associated_SNPs_30557 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr12 100732643 100732643 1 + A G OV 100732630 + 100732610 100732650 41 TCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACC TCAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAGGCAGACC < 41bp 1 0.187775712381889 1 0.210396319627762 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732630 chr12:100732643 nonsynonymous SNV 0.782 0 34 hm5C_associated_SNPs_30558 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr12 100732643 100732643 1 + A G OV 100732631 + 100732611 100732651 41 CAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACCC CAATGCTTTGAGTGTTCCTCCTGCTGGTGCAAGGCAGACCC < 41bp 1 0.662504437155391 1 0.49610224366188 experiment 0.674991125689218 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732631 chr12:100732643 nonsynonymous SNV 0.782 0 33 hm5C_associated_SNPs_30559 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr12 100732643 100732643 1 + A G OV 100732634 + 100732614 100732654 41 TGCTTTGAGTGTTCCTCCTGCTGGTGCAAAGCAGACCCAAC TGCTTTGAGTGTTCCTCCTGCTGGTGCAAGGCAGACCCAAC < 41bp 1 0.637764803177203 1 0.790884733200073 experiment 0.724470393645593 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732634 chr12:100732643 nonsynonymous SNV 0.782 0 30 hm5C_associated_SNPs_30560 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr12 100732643 100732643 1 + A G OV 100732661 + 100732641 100732681 41 AAAGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTA AAGGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTA < 41bp 1 0.516333036177282 1 0.0633128583431244 experiment 0.967333927645436 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732661 chr12:100732643 nonsynonymous SNV 0.782 0 3 hm5C_associated_SNPs_30561 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr12 100732643 100732643 1 + A G OV 100732662 + 100732642 100732682 41 AAGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTAA AGGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTAA < 41bp 1 0.641676562621389 1 0.096072256565094 experiment 0.716646874757223 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732662 chr12:100732643 nonsynonymous SNV 0.782 0 2 hm5C_associated_SNPs_30562 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:100732609-100732645
64251 chr16 22328494 22328494 1 + C G OV 22328499 + 22328479 22328519 41 CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT CTGCGCACGCTGCCCGTGGCCGATCAGATCAAGATCCTGAT < 41bp 1 0.20636079904909 1 0.183167785406113 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22328499 chr16:22328494 nonsynonymous SNV 0.942 4 16 hm5C_associated_SNPs_30563 0 0 5 BUD13 POSTAR2 ENCODE chr16:22328410-22328512
64251 chr15 96875659 96875659 1 + A T OV 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGCGCAGCGTGCGGTGGAACCTGAGCTACACGTGCCGCGC < 41bp 1 0.564814870492301 1 0.585647165775299 experiment 0.870370259015399 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875659 nonsynonymous SNV 1.000 5 16 hm5C_associated_SNPs_30564 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:96875640-96875660
64251 chr19 30936318 30936318 1 + G T OV 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT TTTTTGTCACACGGGCTGAACCAGACTCTCTAGTATAACCT < 41bp 1 0.297989485098836 1 0.110998690128326 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936318 stopgain 0.530 0 31 hm5C_associated_SNPs_30565 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30936293-30936318
64251 chr8 145735156 145735156 1 + C T OV 145735174 + 145735154 145735194 41 GGCCGCGCTAGCTGGGGGCGCGCTGCTGGCGCTGCTGCCCA GGTCGCGCTAGCTGGGGGCGCGCTGCTGGCGCTGCTGCCCA < 41bp 1 0.573838887963658 1 0.350781559944153 experiment 0.852322224072683 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735174 chr8:145735156 nonsynonymous SNV 0.020 1 3 hm5C_associated_SNPs_30566 0 0 1 NONO POSTAR2 ENCODE chr8:145735147-145735253
64251 chr1 171560762 171560762 1 + C T OV 171560780 + 171560760 171560800 41 AACGGTTCTTCTCTGAACAGCAACAGAGCAAACAGATAGGA AATGGTTCTTCTCTGAACAGCAACAGAGCAAACAGATAGGA < 41bp 1 0.350925090618584 1 0.389968723058701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171560780 chr1:171560762 nonsynonymous SNV 0.999 3 3 hm5C_associated_SNPs_30567 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:171560729-171560770
64251 chr11 9462020 9462020 1 + A G OV 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGAGGAACTGGGGAGTGATGGAGATGAT < 41bp 1 0.651410162367347 1 0.476011544466019 experiment 0.697179675265307 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462020 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_30568 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr1 223934699 223934699 1 + G T OV 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA TATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA < 41bp 1 0.742907222224191 1 0.762751340866089 experiment 0.514185555551618 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934699 nonsynonymous SNV 0.776 5 1 hm5C_associated_SNPs_30569 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr17 74557209 74557209 1 + C T OV 74557218 + 74557198 74557238 41 CATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAG CATGATGATTTTAAGTTATCCCTGTCTGAAGGCAAAGAAAG < 41bp 1 0.0744758385434105 1 0.0400821566581726 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557218 chr17:74557209 . . 0 12 hm5C_associated_SNPs_30570 0 0 60 TARDBP POSTAR2 DRA001158,DRS012385 chr17:74557130-74557212
64251 chr17 74557209 74557209 1 + C T OV 74557219 + 74557199 74557239 41 ATGATGATTTCAAGTTATCCCTGTCTGAAGGCAAAGAAAGG ATGATGATTTTAAGTTATCCCTGTCTGAAGGCAAAGAAAGG < 41bp 1 0.0987614622201185 1 0.0693772435188293 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD1B ENSG00000199961 ncRNA_exonic Human snoRNA chr17:74557219 chr17:74557209 . . 0 11 hm5C_associated_SNPs_30571 0 0 60 TARDBP POSTAR2 DRA001158,DRS012385 chr17:74557130-74557212
64251 chr2 32958940 32958940 1 + C T OV 32958943 + 32958923 32958963 41 CTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGT CTACATCTGTATTGGAATGCCTGAAGATTTTCTATTGCTGT < 41bp 1 0.658835113471206 1 0.618620872497559 experiment 0.682329773057588 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32958943 chr2:32958940 nonsynonymous SNV 0.995 4 18 hm5C_associated_SNPs_30572 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:32958932-32958955
64251 chr17 48824043 48824043 1 + A G OV 48824053 + 48824033 48824073 41 AGAGAACAAGATAGAAAATCCAAGGAGAAAGGTTAGTTTAT AGAGAACAAGGTAGAAAATCCAAGGAGAAAGGTTAGTTTAT < 41bp 1 0.665317361863001 1 0.581821322441101 experiment 0.669365276273997 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48824053 chr17:48824043 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_30573 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:48823896-48824070
64251 chr1 222898821 222898821 1 + T C OV 222898817 + 222898797 222898837 41 TCATCTCCCAAAACTCATTACACCTGCGGAAAAAGGAAGAG TCATCTCCCAAAACTCATTACACCCGCGGAAAAAGGAAGAG < 41bp 1 0.275538350641851 1 0.108609080314636 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BROX ENSG00000162819 CDS Human protein_coding chr1:222898817 chr1:222898821 synonymous SNV . 0 25 hm5C_associated_SNPs_30574 0 0 14 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:222898792-222898822
64251 chr15 81221505 81221505 1 + C A OV 81221501 + 81221481 81221521 41 TTGGACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGT TTGGACCATAGCGGAAGGACCCTCACTATAGGCCAGTAGGT < 41bp 1 0.0785937307172523 1 0.0326739549636841 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221501 chr15:81221505 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_30575 0 0 1 SRSF1 POSTAR2 ENCODE chr15:81221422-81221514
64251 chr1 145115803 145115803 1 + A T OV 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACTTGTACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0463206273930703 1 0.0865328907966614 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115803 . . 0 15 hm5C_associated_SNPs_30576 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145115755-145115805
64251 chr8 124811882 124811882 1 + A T OV 124811871 + 124811851 124811891 41 TGTCCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT TGTCCAAAGGTACAAGACTTCGAAAACTGCCTGATATATTT < 41bp 1 0.743050429836299 1 0.724889874458313 experiment 0.513899140327402 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124811871 chr8:124811882 synonymous SNV . 0 32 hm5C_associated_SNPs_30577 0 0 4 DDX24 POSTAR2 ENCODE chr8:124811849-124811894
64251 chr7 129394886 129394886 1 + C G OV 129394901 + 129394881 129394921 41 ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG ATGTAGCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG < 41bp 1 0.647074459043375 1 0.332285910844803 experiment 0.705851081913251 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394901 chr7:129394886 stopgain 1.000 1 6 hm5C_associated_SNPs_30579 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr15 39876542 39876542 1 + T A OV 39876541 + 39876521 39876561 41 GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG GGCCAATGAGCTGAGGCGGCCACCCCTATGCTATCACAACG < 41bp 1 0.167622980043021 1 0.409961700439453 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876541 chr15:39876542 synonymous SNV . 0 22 hm5C_associated_SNPs_30580 0 0 2 BUD13 POSTAR2 ENCODE chr15:39876508-39876550
64251 chr19 10793341 10793341 1 + C T OV 10793360 + 10793340 10793380 41 CCACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAG CTACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAG < 41bp 1 0.126900405544781 1 0.0950523316860199 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793360 chr19:10793341 synonymous SNV . 0 2 hm5C_associated_SNPs_30582 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10793320-10793360
64251 chr19 10793341 10793341 1 + C T OV 10793361 + 10793341 10793381 41 CACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGG TACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGG < 41bp 1 0.520948994343315 1 0.245732367038727 experiment 0.95810201131337 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793361 chr19:10793341 synonymous SNV . 0 1 hm5C_associated_SNPs_30583 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10793320-10793360
64251 chr20 57480494 57480494 1 + C G OV 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA GAGGATGAAGGAGTGCGTGCCTGCTAGGAACGCTCCAACGA < 41bp 1 0.53664211154459 1 0.363990366458893 experiment 0.926715776910819 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480494 stopgain 0.763 0 27 hm5C_associated_SNPs_30584 0 0 33 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr20 57480494 57480494 1 + C G OV 57480512 + 57480492 57480532 41 TACGAACGCTCCAACGAGTACCAGCTGATTGACTGTGCCCA TAGGAACGCTCCAACGAGTACCAGCTGATTGACTGTGCCCA < 41bp 1 0.138616359259436 1 0.0944194793701172 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480512 chr20:57480494 stopgain 0.763 0 3 hm5C_associated_SNPs_30585 0 0 33 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr17 27027974 27027974 1 + G C OV 27027991 + 27027971 27028011 41 CCAGCCCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG CCACCCCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG < 41bp 1 0.231583138388276 1 0.4397853910923 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27027991 chr17:27027974 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_30587 0 0 2 DDX55 POSTAR2 ENCODE chr17:27027955-27028005
64251 chr1 55524228 55524228 1 + G A OV 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGACCACAGCCGTCGCCCGCTGCGCCCCAG < 41bp 1 0.114348314328915 1 0.125695437192917 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524228 stopgain 0.004 1 14 hm5C_associated_SNPs_30588 0 0 5 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524228 55524228 1 + G A OV 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGACCACAGCCGTCGCCCGCTGCGCCCCAGA < 41bp 1 0.444949082794574 1 0.34857365489006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524228 stopgain 0.004 1 13 hm5C_associated_SNPs_30589 0 0 5 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr12 70704723 70704723 1 + G T OV 70704725 + 70704705 70704745 41 AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA AAGAAGTTTGTAGAGGGGTTCGACAGTGACTACCATGACGA < 41bp 1 0.754520527548548 1 0.482736110687256 experiment 0.490958944902905 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70704725 chr12:70704723 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_30590 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:70704691-70704731
64251 chr22 41735907 41735907 1 + C T OV 41735900 + 41735880 41735920 41 CCCGTGTTCCCCGGCGGGACCCCACTGCTACCACCTGTGGT CCCGTGTTCCCCGGCGGGACCCCACTGTTACCACCTGTGGT < 41bp 1 0.0673003976602233 1 0.0856137573719025 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735900 chr22:41735907 synonymous SNV . 0 28 hm5C_associated_SNPs_30591 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr22:41735906-41735937
64251 chr17 16285382 16285382 1 + G A OV 16285385 + 16285365 16285405 41 GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCCATACTCTTTCTGACTACAACATCC < 41bp 1 0.349521343025431 1 0.218434929847717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285385 chr17:16285382 nonsynonymous SNV 0.985 0 18 hm5C_associated_SNPs_30592 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:16285353-16285387
64251 chr15 91432751 91432751 1 + G C OV 91432750 + 91432730 91432770 41 GGCGCTGTCCCCCACAGGTCCGCACCTGACGTCCCACCCTG GGCGCTGTCCCCCACAGGTCCCCACCTGACGTCCCACCCTG < 41bp 1 0.139074854038611 1 0.0494334399700165 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FES ENSG00000182511 CDS Human protein_coding chr15:91432750 chr15:91432751 nonsynonymous SNV 0.320 0 22 hm5C_associated_SNPs_30593 0 0 1 PRPF8 POSTAR2 ENCODE chr15:91432651-91432760
64251 chr19 49377589 49377589 1 + G C OV 49377573 + 49377553 49377593 41 GATGAGGAAGAAGATGAGGACAGTGACTCTGGATCAGATGA GATGAGGAAGAAGATGAGGACAGTGACTCTGGATCACATGA < 41bp 1 0.318605799372974 1 0.196166783571243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377573 chr19:49377589 nonsynonymous SNV 0.192 0 37 hm5C_associated_SNPs_30596 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 49377589 49377589 1 + G C OV 49377579 + 49377559 49377599 41 GAAGAAGATGAGGACAGTGACTCTGGATCAGATGAGGAAGA GAAGAAGATGAGGACAGTGACTCTGGATCACATGAGGAAGA < 41bp 1 0.383295844061065 1 0.238874465227127 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377579 chr19:49377589 nonsynonymous SNV 0.192 0 31 hm5C_associated_SNPs_30597 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 49377589 49377589 1 + G C OV 49377587 + 49377567 49377607 41 TGAGGACAGTGACTCTGGATCAGATGAGGAAGAGGGAGAAG TGAGGACAGTGACTCTGGATCACATGAGGAAGAGGGAGAAG < 41bp 1 0.408141171564937 1 0.0760107040405273 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377587 chr19:49377589 nonsynonymous SNV 0.192 0 23 hm5C_associated_SNPs_30598 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 49377957 49377957 1 + G C OV 49377943 + 49377923 49377963 41 ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAG ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGACACAGAG < 41bp 1 0.69389440725451 1 0.807727873325348 experiment 0.612211185490981 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377943 chr19:49377957 nonsynonymous SNV 0.007 0 35 hm5C_associated_SNPs_30599 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49377927-49377965
64251 chr4 48384735 48384735 1 + C T OV 48384732 + 48384712 48384752 41 TATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCAC TATGCATCATGCAGTATACCCTGTTGTTAACAGGTTTTCAC < 41bp 1 0.394846403533757 1 0.0264690816402435 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384732 chr4:48384735 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_30600 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:48384722-48384757
64251 chr16 67915660 67915660 1 + G T OV 67915640 + 67915620 67915660 41 GAGAGCTGGCAGAGCTGCGGCACAGCCAGGAAGAGCTGCTG GAGAGCTGGCAGAGCTGCGGCACAGCCAGGAAGAGCTGCTT < 41bp 1 0.387920805570599 1 0.180884748697281 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915640 chr16:67915660 synonymous SNV . 0 41 hm5C_associated_SNPs_30601 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67915650-67915692
64251 chr11 67017881 67017881 1 + A C OV 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAAGCTCCGGGGATCGTACCTCACTGTCACGCTAC < 41bp 1 0.114762183051913 1 0.142388433218002 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017881 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_30602 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67017853-67017899
64251 chr19 30936288 30936288 1 + T A OV 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT ATTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT < 41bp 1 0.338745794346692 1 0.0555409789085388 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936288 nonsynonymous SNV 0.989 1 1 hm5C_associated_SNPs_30603 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936273-30936300
64251 chr21 34926420 34926420 1 + T A OV 34926429 + 34926409 34926449 41 TAAATATGATGTTGATTTATCTTTAACTACTCAAGATACTG TAAATATGATGATGATTTATCTTTAACTACTCAAGATACTG < 41bp 1 0.100808118852444 1 0.131414145231247 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SON ENSG00000159140 CDS Human protein_coding chr21:34926429 chr21:34926420 nonsynonymous SNV 0.998 3 12 hm5C_associated_SNPs_30607 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917665 chr21:34926160-34926651
64251 chr11 61404818 61404818 1 + G A OV 61404820 + 61404800 61404840 41 GAGGGTGTCCGCAATGTTGCCGGTGTCTGTCCGCAGATCCA GAGGGTGTCCGCAATGTTACCGGTGTCTGTCCGCAGATCCA < 41bp 1 0.478634320903562 1 0.769654333591461 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404820 chr11:61404818 . . 0 19 hm5C_associated_SNPs_30608 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:61404764-61404820
64251 chr1 153724847 153724847 1 + T C OV 153724860 + 153724840 153724880 41 AAGATATTATCCATAATCCTCAGGCCTTGAGTCCTCAGTTC AAGATATCATCCATAATCCTCAGGCCTTGAGTCCTCAGTTC < 41bp 1 0.584878546613443 1 0.829707980155945 experiment 0.830242906773114 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout INTS3 ENSG00000143624 CDS Human protein_coding chr1:153724860 chr1:153724847 synonymous SNV . 0 8 hm5C_associated_SNPs_30609 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153724842-153724868
64251 chr12 53671331 53671331 1 + T G OV 53671316 + 53671296 53671336 41 GAGGAATTTGAAGTCAATGACCTGAACTATGAAGATAAACT GAGGAATTTGAAGTCAATGACCTGAACTATGAAGAGAAACT < 41bp 1 0.0748237751717975 1 0.0739199221134186 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671316 chr12:53671331 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_30610 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53671289-53671368
64251 chr3 25542776 25542776 1 + G A OV 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGCCAATACTGTCAACTCCAGAAGTGCTT < 41bp 1 0.206951015929681 1 0.081779807806015 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542776 nonsynonymous SNV 0.999 5 26 hm5C_associated_SNPs_30611 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:25542765-25542798
64251 chr19 50158050 50158050 1 + A C OV 50158043 + 50158023 50158063 41 CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCT CTGGGGGGCTGCGGTTCGACCCCCCCCCCCCCCACCGGGCT < 41bp 1 0.133970265194745 1 0.198409676551819 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158043 chr19:50158050 nonsynonymous SNV 0.962 2 28 hm5C_associated_SNPs_30612 0 0 2 GRWD1 POSTAR2 ENCODE chr19:50158021-50158063
64251 chr20 39986958 39986958 1 + G T OV 39986960 + 39986940 39986980 41 GTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGA GTTTCTGCCCCACGGACATCCCTTCTATGCTGCCTTTGGGA < 41bp 1 0.0160447735555366 1 0.186748504638672 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39986960 chr20:39986958 nonsynonymous SNV 0.676 1 19 hm5C_associated_SNPs_30613 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:39986940-39986960
64251 chr17 72435976 72435976 1 + G A OV 72435978 + 72435958 72435998 41 CTCTTCCTGTTCCCAGGGGCCTGGGCCCAGGGCCATGTCCC CTCTTCCTGTTCCCAGGGACCTGGGCCCAGGGCCATGTCCC < 41bp 1 0.708246795774831 1 0.760434508323669 experiment 0.583506408450338 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72435978 chr17:72435976 nonsynonymous SNV 0.437 1 19 hm5C_associated_SNPs_30614 0 0 5 DDX3X POSTAR2 ENCODE chr17:72435936-72436018
64251 chr5 37026373 37026373 1 + A G OV 37026368 + 37026348 37026388 41 ATTCCAGAAACTCTGGTTTACTCCAACTCCACACAATGACA ATTCCAGAAACTCTGGTTTACTCCAGCTCCACACAATGACA < 41bp 1 0.469789095397254 1 0.900192856788635 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:37026368 chr5:37026373 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_30615 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:37026336-37026374
64251 chr19 14674819 14674819 1 + C T OV 14674820 + 14674800 14674840 41 CTAACAGAGTACGCGGGGCCCCTTTTCATCTACCTGCTCTT CTAACAGAGTACGCGGGGCTCCTTTTCATCTACCTGCTCTT < 41bp 1 0.0479729724640359 1 0.0168598592281342 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TECR ENSG00000099797 CDS Human protein_coding chr19:14674820 chr19:14674819 nonsynonymous SNV 0.988 4 20 hm5C_associated_SNPs_30616 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:14674800-14674820
64251 chr8 27369405 27369405 1 + G C OV 27369415 + 27369395 27369435 41 AGTGACATGAGCCATGGGTACGTGACAGTAAAGGTGAGTCA AGTGACATGACCCATGGGTACGTGACAGTAAAGGTGAGTCA < 41bp 1 0.650441474864302 1 0.20956027507782 experiment 0.699117050271396 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27369415 chr8:27369405 nonsynonymous SNV 0.398 0 11 hm5C_associated_SNPs_30617 0 0 7 DDX24 POSTAR2 ENCODE chr8:27369386-27369467
64251 chr8 77620152 77620152 1 + T C OV 77620172 + 77620152 77620192 41 TTGAAGTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG CTGAAGTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG < 41bp 1 0.0842523242732 1 0.0640348494052887 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77620172 chr8:77620152 synonymous SNV . 0 1 hm5C_associated_SNPs_30619 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:77620151-77620152
64251 chr12 112321461 112321461 1 + A C OV 112321465 + 112321445 112321485 41 TTTTACTCCAAACACCACAGCCGGACTATCCCAAAGGATAT TTTTACTCCAAACACCCCAGCCGGACTATCCCAAAGGATAT < 41bp 1 0.358291908171135 1 0.0986407697200775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321465 chr12:112321461 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_30620 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:112321434-112321464
64251 chr12 112321461 112321461 1 + A C OV 112321470 + 112321450 112321490 41 CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCGAA CTCCAAACACCCCAGCCGGACTATCCCAAAGGATATGCGAA < 41bp 1 0.0428542775445899 1 0.0657415688037872 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321470 chr12:112321461 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_30621 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:112321434-112321464
64251 chr16 89627459 89627459 1 + G A OV 89627445 + 89627425 89627465 41 CGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGAT CGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCATAAGAT < 41bp 1 0.297749493251565 1 0.0844106674194336 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627445 chr16:89627459 nonsynonymous SNV 0.922 1 35 hm5C_associated_SNPs_30622 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr16 89627459 89627459 1 + G A OV 89627456 + 89627436 89627476 41 CACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGGTGAG CACGTGGTTCAACCAGCCGGCCCATAAGATCCGCAGGTGAG < 41bp 1 0.0808691826824552 1 0.156697958707809 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627456 chr16:89627459 nonsynonymous SNV 0.922 1 24 hm5C_associated_SNPs_30623 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr16 89627459 89627459 1 + G A OV 89627469 + 89627449 89627489 41 CAGCCGGCCCGTAAGATCCGCAGGTGAGCCCTGCGCTCGGG CAGCCGGCCCATAAGATCCGCAGGTGAGCCCTGCGCTCGGG < 41bp 1 0.728156737384705 1 0.839765787124634 experiment 0.543686525230591 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627469 chr16:89627459 nonsynonymous SNV 0.922 1 11 hm5C_associated_SNPs_30624 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr7 4823018 4823018 1 + G C OV 4823023 + 4823003 4823043 41 GAGCCGGCAGCCTGAGGGACCCAGCCTCAGACACCTCCTCC GAGCCGGCAGCCTGACGGACCCAGCCTCAGACACCTCCTCC < 41bp 1 0.162148464634259 1 0.269451320171356 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823023 chr7:4823018 nonsynonymous SNV 0.975 1 16 hm5C_associated_SNPs_30625 0 0 2 PPIG POSTAR2 ENCODE chr7:4822977-4823030
64251 chr17 66526554 66526554 1 + C A OV 66526558 + 66526538 66526578 41 TCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA TCCTCAAACGAAACATACAGCAGTACAACAGTTTTGTGTCA < 41bp 1 0.512907832019169 1 0.858319997787476 experiment 0.974184335961662 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66526558 chr17:66526554 synonymous SNV . 0 17 hm5C_associated_SNPs_30626 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:66526482-66526571
64251 chr8 124811854 124811854 1 + C G OV 124811871 + 124811851 124811891 41 TGTCCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT TGTGCAAAGGTACAAGACTTCGAAAACTGCCAGATATATTT < 41bp 1 0.723711511609116 1 0.678473591804504 experiment 0.552576976781769 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124811871 chr8:124811854 nonsynonymous SNV 0.997 1 4 hm5C_associated_SNPs_30627 0 0 3 DDX24 POSTAR2 ENCODE chr8:124811826-124811873
64251 chr9 35733472 35733472 1 + C G OV 35733471 + 35733451 35733491 41 TTATTCTGCCTGAGACACTTCCTCTCACTAAGGTAAGACTC TTATTCTGCCTGAGACACTTCGTCTCACTAAGGTAAGACTC < 41bp 1 0.131172453198794 1 0.134478688240051 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733471 chr9:35733472 nonsynonymous SNV 0.979 5 22 hm5C_associated_SNPs_30635 0 0 4 BUD13 POSTAR2 ENCODE chr9:35733404-35733515
64251 chr7 100275155 100275155 1 + T C OV 100275144 + 100275124 100275164 41 CACGCCATCCCGCTGCGCTCCTCCTGGGTAATGACCTGTGC CACGCCATCCCGCTGCGCTCCTCCTGGGTAACGACCTGTGC < 41bp 1 0.567876470677547 1 0.672003328800201 experiment 0.864247058644906 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275144 chr7:100275155 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_30638 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100275124-100275156
64251 chr1 235543451 235543451 1 + C A OV 235543456 + 235543436 235543476 41 TTTTGCTGGTGTTGTCCCTCCCGTGGCAGGTAAGCAATTAT TTTTGCTGGTGTTGTACCTCCCGTGGCAGGTAAGCAATTAT < 41bp 1 0.176246387672108 1 0.284889161586761 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235543456 chr1:235543451 synonymous SNV . 0 16 hm5C_associated_SNPs_30640 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235543435-235543465
64251 chr6 138576691 138576691 1 + G A OV 138576703 + 138576683 138576723 41 CGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC CGTCTCCGAGAGTGTCTGACCACGGCCGAGGATCAGGCTGC < 41bp 1 0.685725799026388 1 0.665633380413055 experiment 0.628548401947225 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF3 ENSG00000112379 CDS Human protein_coding chr6:138576703 chr6:138576691 nonsynonymous SNV 0.037 3 9 hm5C_associated_SNPs_30642 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr6:138576680-138576700
64251 chrX 70514365 70514365 1 + T C OV 70514364 + 70514344 70514384 41 GACAGATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT GACAGATGCAGTGAAGGCTCCCTCCTGCTAACCACGTAAGT < 41bp 1 0.0353874363981741 1 0.114068984985352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70514364 chrX:70514365 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_30643 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:70514297-70514370
64251 chr6 35436212 35436212 1 + A G OV 35436198 + 35436178 35436218 41 AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGT AGTCTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCGTGAGGT < 41bp 1 0.729334941510059 1 0.904738664627075 experiment 0.541330116979882 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436198 chr6:35436212 nonsynonymous SNV 0.621 1 35 hm5C_associated_SNPs_30644 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:35436207-35436259
64251 chr6 35436212 35436212 1 + A G OV 35436201 + 35436181 35436221 41 CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCATGAGGTGAG CTCTTTTCCGGTTAGCGCGGCGTGAGAAGCCGTGAGGTGAG < 41bp 1 0.381422416864752 1 0.545650780200958 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436201 chr6:35436212 nonsynonymous SNV 0.621 1 32 hm5C_associated_SNPs_30645 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:35436207-35436259
64251 chr2 32617172 32617172 1 + G C OV 32617180 + 32617160 32617200 41 ATGTAGGCTATAGGTGGGCACAACCAGATCCCATGGCTCAA ATGTAGGCTATACGTGGGCACAACCAGATCCCATGGCTCAA < 41bp 1 0.100123823808229 1 0.0738645195960999 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32617180 chr2:32617172 nonsynonymous SNV 0.999 2 13 hm5C_associated_SNPs_30646 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32617160-32617177
64251 chr19 10812854 10812854 1 + C G OV 10812865 + 10812845 10812885 41 GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGAGA GGAGGGCGTGCGCTTCCGCTCCCCCTACGACGGCAATGAGA < 41bp 1 0.200787120714418 1 0.0512370765209198 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812865 chr19:10812854 synonymous SNV . 0 10 hm5C_associated_SNPs_30647 0 0 1 PPIG POSTAR2 ENCODE chr19:10812798-10812860
64251 chr21 34925258 34925258 1 + G A OV 34925277 + 34925257 34925297 41 AGTATCAGAGGCTGCTGTGACTGTTCCAGAACCACCACCAG AATATCAGAGGCTGCTGTGACTGTTCCAGAACCACCACCAG < 41bp 1 0.259884361633687 1 0.720857381820679 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925277 chr21:34925258 nonsynonymous SNV 0.995 0 2 hm5C_associated_SNPs_30648 0 0 34 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34925134-34925350
64251 chr17 41570102 41570102 1 + G A OV 41570095 + 41570075 41570115 41 GTCGAAGCCGAGATCGAAACCGAGATCGAGACAGAGATAGG GTCGAAGCCGAGATCGAAACCGAGATCAAGACAGAGATAGG < 41bp 1 0.792132411852224 1 0.880131244659424 experiment 0.415735176295552 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570095 chr17:41570102 nonsynonymous SNV 0.590 3 28 hm5C_associated_SNPs_30649 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570077-41570134
64251 chr5 179195982 179195982 1 + G T OV 179195992 + 179195972 179196012 41 CCGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCAACAG CCGCTGTAATTAAGCAGCATCAGTTGCTTTTGGACCAACAG < 41bp 1 0.0782794448853076 1 0.42492413520813 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAML1 ENSG00000161021 CDS Human protein_coding chr5:179195992 chr5:179195982 nonsynonymous SNV 0.849 2 11 hm5C_associated_SNPs_30650 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:179195980-179196000
64251 chr20 37580954 37580954 1 + G T OV 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT TGGGCACCCCCCACCTGTAACTGTACTTGAGTGACTCACTT < 41bp 1 0.418274607498304 1 0.130797058343887 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580954 stopgain 0.981 0 18 hm5C_associated_SNPs_30651 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr12 123892121 123892121 1 + C T OV 123892103 + 123892083 123892123 41 AATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCACGA AATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCATGA < 41bp 1 0.428143382018855 1 0.299770653247833 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892103 chr12:123892121 synonymous SNV . 0 39 hm5C_associated_SNPs_30652 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:123892120-123892140
64251 chr10 5963488 5963488 1 + C T OV 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT TGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT < 41bp 1 0.103022393530957 1 0.520311057567596 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963488 nonsynonymous SNV 0.787 5 1 hm5C_associated_SNPs_30653 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr1 44878386 44878386 1 + A T OV 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGATTGACAGA < 41bp 1 0.527751864673167 1 0.148510247468948 experiment 0.944496270653665 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878386 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_30654 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:44878386-44878407
64251 chr1 44878386 44878386 1 + A T OV 44878382 + 44878362 44878402 41 CCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGTAC CCTCATCTAGCCCAGAGGATCGGATTGACAGATGTAAGTAC < 41bp 1 0.389342592205928 1 0.313379347324371 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878382 chr1:44878386 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_30655 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:44878386-44878407
64251 chr6 26252039 26252039 1 + G A OV 26252046 + 26252026 26252066 41 CACCCCGACACCGGCATCTCCTCCAAAGCCATGGGGATCAT CACCCCGACACCGACATCTCCTCCAAAGCCATGGGGATCAT < 41bp 1 0.718654198765664 1 0.955605924129486 experiment 0.562691602468671 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIST1H2BH ENSG00000197459 CDS Human other chr6:26252046 chr6:26252039 nonsynonymous SNV 0.952 2 14 hm5C_associated_SNPs_30660 0 0 2 SND1 POSTAR2 ENCODE chr6:26251991-26252071
64251 chr13 114175027 114175027 1 + C A OV 114175039 + 114175019 114175059 41 CATACAGGCGGGCGCCAGTGCATCTTCTAGGTAAACGCTTT CATACAGGAGGGCGCCAGTGCATCTTCTAGGTAAACGCTTT < 41bp 1 0.214281762553777 1 0.257477909326553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114175039 chr13:114175027 nonsynonymous SNV 0.092 2 9 hm5C_associated_SNPs_30662 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr13:114175026-114175048
64251 chr19 13063845 13063845 1 + G C OV 13063834 + 13063814 13063854 41 AGAACTTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGAT AGAACTTGGCTGCCAACTTCCTCCTGAGTCACAACTTTGAT < 41bp 1 0.451576358789549 1 0.573380470275879 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23A ENSG00000179262 CDS Human protein_coding chr19:13063834 chr19:13063845 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_30663 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr19:13063782-13063926
64251 chr12 69119562 69119562 1 + T C OV 69119560 + 69119540 69119580 41 ATAGTTCAAAAGTTTCTTATCCTGGGAGACATTGATGGTAA ATAGTTCAAAAGTTTCTTATCCCGGGAGACATTGATGGTAA < 41bp 1 0.649168676616222 1 0.431593060493469 experiment 0.701662646767556 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69119560 chr12:69119562 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_30665 0 0 1 UCHL5 POSTAR2 ENCODE chr12:69119556-69119573
64251 chr17 41570223 41570223 1 + C T OV 41570239 + 41570219 41570259 41 GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGG GGAGTAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGG < 41bp 1 0.452490832363119 1 0.661772668361664 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570239 chr17:41570223 synonymous SNV . 0 5 hm5C_associated_SNPs_30666 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570193-41570223
64251 chr17 41570223 41570223 1 + C T OV 41570240 + 41570220 41570260 41 GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGG GAGTAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGG < 41bp 1 0.340866504451455 1 0.762595772743225 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570240 chr17:41570223 synonymous SNV . 0 4 hm5C_associated_SNPs_30667 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570193-41570223
64251 chr8 144332294 144332294 1 + G A OV 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCAGATCTT < 41bp 1 0.202357655258749 1 0.180901616811752 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332294 nonsynonymous SNV 0.132 0 35 hm5C_associated_SNPs_30668 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:144332286-144332304
64251 chr7 150769146 150769146 1 + T C OV 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT CCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT < 41bp 1 0.0654912471467895 1 0.0467804372310638 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769146 nonsynonymous SNV 0.995 2 1 hm5C_associated_SNPs_30669 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chr18 60642777 60642777 1 + G A OV 60642776 + 60642756 60642796 41 TCTCTGTCGAAATGGAAAGCCGCTGCCTCTGTCCAGATCTT TCTCTGTCGAAATGGAAAGCCACTGCCTCTGTCCAGATCTT < 41bp 1 0.0976749863749848 1 0.167920917272568 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60642776 chr18:60642777 synonymous SNV . 0 22 hm5C_associated_SNPs_30670 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:60642766-60642791
64251 chr16 57144714 57144714 1 + G C OV 57144695 + 57144675 57144715 41 GGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGT GGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCACT < 41bp 1 0.212488596220942 1 0.304171293973923 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144695 chr16:57144714 nonsynonymous SNV 0.793 1 40 hm5C_associated_SNPs_30671 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144714 57144714 1 + G C OV 57144698 + 57144678 57144718 41 TGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATT TGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCACTATT < 41bp 1 0.194201838848263 1 0.453797340393066 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144698 chr16:57144714 nonsynonymous SNV 0.793 1 37 hm5C_associated_SNPs_30672 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144714 57144714 1 + G C OV 57144699 + 57144679 57144719 41 GCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTG GCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCACTATTG < 41bp 1 0.747929796451586 1 0.73625648021698 experiment 0.504140407096828 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144699 chr16:57144714 nonsynonymous SNV 0.793 1 36 hm5C_associated_SNPs_30673 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144714 57144714 1 + G C OV 57144700 + 57144680 57144720 41 CCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGC CCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCACTATTGC < 41bp 1 0.353218136848383 1 0.414362460374832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144700 chr16:57144714 nonsynonymous SNV 0.793 1 35 hm5C_associated_SNPs_30674 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144714 57144714 1 + G C OV 57144701 + 57144681 57144721 41 CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCG CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCACTATTGCG < 41bp 1 0.288936815574768 1 0.447475254535675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144701 chr16:57144714 nonsynonymous SNV 0.793 1 34 hm5C_associated_SNPs_30675 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr3 183898998 183898998 1 + G T OV 183899018 + 183898998 183899038 41 GATGAAACAAGCAAGAGGTGCCTGAGGCAGGAGAGCTGGTG TATGAAACAAGCAAGAGGTGCCTGAGGCAGGAGAGCTGGTG < 41bp 1 0.165504967819538 1 0.176973193883896 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899018 chr3:183898998 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_30685 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183898885-183899001
64251 chr3 61975339 61975339 1 + C G OV 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGGTGTGGGGGCCGTCACCAGTCTCCTATTGAC < 41bp 1 0.181087199693217 1 0.216757446527481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975339 nonsynonymous SNV 0.992 0 11 hm5C_associated_SNPs_30686 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr10 128830535 128830535 1 + C G OV 128830517 + 128830497 128830537 41 AGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTC AGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGAGTC < 41bp 1 0.424968999711291 1 0.333247661590576 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128830517 chr10:128830535 nonsynonymous SNV 0.983 4 39 hm5C_associated_SNPs_30688 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr10:128830520-128830540
64251 chr5 5462541 5462541 1 + C T OV 5462527 + 5462507 5462547 41 CTGTGGAGACACAGGGAGATCTGGTGGTGAGGCCCTGGCTG CTGTGGAGACACAGGGAGATCTGGTGGTGAGGCCTTGGCTG < 41bp 1 0.796515402859685 1 0.765283465385437 experiment 0.406969194280629 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5462527 chr5:5462541 synonymous SNV . 0 35 hm5C_associated_SNPs_30691 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5462522-5462551
64251 chr10 102763427 102763427 1 + C G OV 102763411 + 102763391 102763431 41 TGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCT TGACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTGCTCT < 41bp 1 0.0492466840713827 1 0.0785460770130157 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763411 chr10:102763427 nonsynonymous SNV 0.985 1 37 hm5C_associated_SNPs_30693 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102763409-102763452
64251 chr10 102763427 102763427 1 + C G OV 102763412 + 102763392 102763432 41 GACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTCCTCTT GACGCAGCTGTTTGGGGGCCCTGCCTCCTCCTCCTGCTCTT < 41bp 1 0.348353643711118 1 0.138051956892014 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763412 chr10:102763427 nonsynonymous SNV 0.985 1 36 hm5C_associated_SNPs_30694 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102763409-102763452
64251 chr1 156202165 156202165 1 + G C OV 156202172 + 156202152 156202192 41 TGCAGCCTGCGATGACACAGCAAATCTATGACAAGTTTATA TGCAGCCTGCGATCACACAGCAAATCTATGACAAGTTTATA < 41bp 1 0.0879671206532104 1 0.242846101522446 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PMF1;PMF1-BGLAP ENSG00000160783;ENSG00000260238 CDS Human other chr1:156202172 chr1:156202165 nonsynonymous SNV 0.825 0 14 hm5C_associated_SNPs_30695 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:156202134-156202168
64251 chr5 85915260 85915260 1 + G A OV 85915269 + 85915249 85915289 41 CCTTCCTTGTAGTAAGACACCAACTGCTTAAAACATAAGGA CCTTCCTTGTAATAAGACACCAACTGCTTAAAACATAAGGA < 41bp 1 0.32122180888525 1 0.415318995714188 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COX7C ENSG00000127184;ENSG00000127184 exonic;splicing Human other chr5:85915269 chr5:85915260 nonsynonymous SNV 0.707 2 12 hm5C_associated_SNPs_30696 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:85915209-85915276
64251 chrX 48564750 48564750 1 + A G OV 48564763 + 48564743 48564783 41 GACGTGTACACCGTGGATGCCGCCTACTATGGCAACATCTC GACGTGTGCACCGTGGATGCCGCCTACTATGGCAACATCTC < 41bp 1 0.295620423061307 1 0.439867913722992 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564763 chrX:48564750 nonsynonymous SNV 0.250 4 8 hm5C_associated_SNPs_30697 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48564704-48564754
64251 chr16 66969423 66969423 1 + C T OV 66969432 + 66969412 66969452 41 GACTCCCTGCCCAGTCCAAACTCCAAGGCTGGGCAAGGCAC GACTCCCTGCCTAGTCCAAACTCCAAGGCTGGGCAAGGCAC < 41bp 1 0.758640581186526 1 0.926695346832275 experiment 0.482718837626947 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66969432 chr16:66969423 nonsynonymous SNV 0.063 1 12 hm5C_associated_SNPs_30698 0 0 1 DDX6 POSTAR2 ENCODE chr16:66969360-66969426
64251 chr7 99956617 99956617 1 + T C OV 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTACTTCTGCCGAGTCGAGCTGGACACCCGG < 41bp 1 0.591185837244257 1 0.712899267673492 experiment 0.817628325511486 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956617 nonsynonymous SNV 0.158 1 14 hm5C_associated_SNPs_30699 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr7 99956617 99956617 1 + T C OV 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTACTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG < 41bp 1 0.773909883592488 1 0.787961602210999 experiment 0.452180232815023 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956617 nonsynonymous SNV 0.158 1 5 hm5C_associated_SNPs_30700 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr5 71493396 71493396 1 + G A OV 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGAATC < 41bp 1 0.178393597368951 1 0.28535383939743 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493396 nonsynonymous SNV 0.636 2 38 hm5C_associated_SNPs_30702 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493396 71493396 1 + G A OV 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGAATCCGAG < 41bp 1 0.0348591679217916 1 0.105740308761597 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493396 nonsynonymous SNV 0.636 2 34 hm5C_associated_SNPs_30703 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493395 71493395 1 + G A OV 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTAGATC < 41bp 1 0.168448853573335 1 0.26808950304985 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493395 nonsynonymous SNV 0.653 3 37 hm5C_associated_SNPs_30705 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493395 71493395 1 + G A OV 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTAGATCCGAG < 41bp 1 0.0382555771749028 1 0.160461574792862 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493395 nonsynonymous SNV 0.653 3 33 hm5C_associated_SNPs_30706 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr8 68087634 68087634 1 + G C OV 68087626 + 68087606 68087646 41 AGCAAGCCCTGCTAAGAGAGCAGCAGAAGAGGCTGAACAGA AGCAAGCCCTGCTAAGAGAGCAGCAGAACAGGCTGAACAGA < 41bp 1 0.72079503346996 1 0.455138504505157 experiment 0.55840993306008 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68087626 chr8:68087634 nonsynonymous SNV 0.975 1 29 hm5C_associated_SNPs_30707 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr8:68087620-68087640
64251 chr2 204259457 204259457 1 + C G OV 204259473 + 204259453 204259493 41 AGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCC AGTGGGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCC < 41bp 1 0.524614700389116 1 0.526201963424683 experiment 0.950770599221769 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259473 chr2:204259457 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_30708 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204259454-204259492
64251 chr5 54640990 54640990 1 + A G OV 54640986 + 54640966 54641006 41 TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC TCGAGATGCAGGTGATTTGGCCAAGGGAGACCAGAAAGGGC < 41bp 1 0.382410541466406 1 0.783478975296021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640986 chr5:54640990 synonymous SNV . 0 25 hm5C_associated_SNPs_30712 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr5 54640990 54640990 1 + A G OV 54640997 + 54640977 54641017 41 GTGATTTGGCCAAAGGAGACCAGAAAGGGCGGAAAGGAGGA GTGATTTGGCCAAGGGAGACCAGAAAGGGCGGAAAGGAGGA < 41bp 1 0.741182006603864 1 0.510681331157684 experiment 0.517635986792272 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640997 chr5:54640990 synonymous SNV . 0 14 hm5C_associated_SNPs_30713 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr5 54640990 54640990 1 + A G OV 54641006 + 54640986 54641026 41 CCAAAGGAGACCAGAAAGGGCGGAAAGGAGGAACAAAAGGT CCAAGGGAGACCAGAAAGGGCGGAAAGGAGGAACAAAAGGT < 41bp 1 0.703323149571363 1 0.392305910587311 experiment 0.593353700857274 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54641006 chr5:54640990 synonymous SNV . 0 5 hm5C_associated_SNPs_30714 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54640978-54640996
64251 chr3 9517427 9517427 1 + T C OV 9517422 + 9517402 9517442 41 GGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGC GGTATTTTAGCAGCCAGCCACATTCCGGAAACAGCACTGGC < 41bp 1 0.050802192022758 1 0.0847476422786713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517422 chr3:9517427 synonymous SNV . 0 26 hm5C_associated_SNPs_30716 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9517391-9517438
64251 chr12 6979505 6979505 1 + C G OV 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGTGGTGCTTCGCTCAAGCCCGAATTCGTGG < 41bp 1 0.353922349908518 1 0.0702081322669983 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979505 synonymous SNV . 0 22 hm5C_associated_SNPs_30726 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr12 6979505 6979505 1 + C G OV 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGTGGTGCTTCGCTCAAGCCCGAATTCGTGGACAT < 41bp 1 0.590385239206458 1 0.493698328733444 experiment 0.819229521587084 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979505 synonymous SNV . 0 18 hm5C_associated_SNPs_30727 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6979473-6979516
64251 chr1 29435931 29435931 1 + C T OV 29435945 + 29435925 29435965 41 CACCACCACAACTCAAATTACCAAGGTAACAGACCAGCTAG CACCACTACAACTCAAATTACCAAGGTAACAGACCAGCTAG < 41bp 1 0.334745264538467 1 0.354248642921448 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPB41 ENSG00000159023 CDS Human protein_coding chr1:29435945 chr1:29435931 synonymous SNV . 0 7 hm5C_associated_SNPs_30728 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:29435920-29435940
64251 chr1 29435931 29435931 1 + C T OV 29435946 + 29435926 29435966 41 ACCACCACAACTCAAATTACCAAGGTAACAGACCAGCTAGA ACCACTACAACTCAAATTACCAAGGTAACAGACCAGCTAGA < 41bp 1 0.559952537764351 1 0.71496057510376 experiment 0.880094924471298 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPB41 ENSG00000159023 CDS Human protein_coding chr1:29435946 chr1:29435931 synonymous SNV . 0 6 hm5C_associated_SNPs_30729 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:29435920-29435940
64251 chr22 41922335 41922335 1 + G A OV 41922331 + 41922311 41922351 41 TGGCTCAAGTTCCGTGGGCACTTGGATAACATCTCCAACAA TGGCTCAAGTTCCGTGGGCACTTGAATAACATCTCCAACAA < 41bp 1 0.697292815064042 1 0.655420243740082 experiment 0.605414369871917 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41922331 chr22:41922335 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_30730 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:41922316-41922349
64251 chr11 114273569 114273569 1 + A G OV 114273562 + 114273542 114273582 41 CATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGT CATTTTAGGAAGTAGTCATGCCCCACAGGATGTCAGTTTGT < 41bp 1 0.517580575030032 1 0.064616322517395 experiment 0.964838849939936 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273562 chr11:114273569 nonsynonymous SNV . 0 28 hm5C_associated_SNPs_30731 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273569 114273569 1 + A G OV 114273563 + 114273543 114273583 41 ATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGTC ATTTTAGGAAGTAGTCATGCCCCACAGGATGTCAGTTTGTC < 41bp 1 0.152360007219641 1 0.186032772064209 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273563 chr11:114273569 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_30732 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273569 114273569 1 + A G OV 114273583 + 114273563 114273603 41 CCCACAAGATGTCAGTTTGTCATATCCCCAACATCATGTTG CCCACAGGATGTCAGTTTGTCATATCCCCAACATCATGTTG < 41bp 1 0.291967356032003 1 0.0837568342685699 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273583 chr11:114273569 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_30733 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273569 114273569 1 + A G OV 114273589 + 114273569 114273609 41 AGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT GGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT < 41bp 1 0.658442150924656 1 0.0648296177387238 experiment 0.683115698150687 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273589 chr11:114273569 nonsynonymous SNV . 0 1 hm5C_associated_SNPs_30734 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr12 56532006 56532006 1 + T A OV 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG GAGGATGTCCCATCTGGCCGCCTGCACATGCGCCTGGAGCG < 41bp 1 0.0548136643565562 1 0.496185600757599 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56532006 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_30735 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr12 56532006 56532006 1 + T A OV 56532000 + 56531980 56532020 41 AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGT AGGATGTCCCATCTGGCCGCCTGCACATGCGCCTGGAGCGT < 41bp 1 0.503814301090347 1 0.611242890357971 experiment 0.992371397819305 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532000 chr12:56532006 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_30736 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr19 39964938 39964938 1 + C T OV 39964940 + 39964920 39964960 41 GGTTCCTACCAGCCCAGCCCCAGCCCCCAGAGCTACCACCA GGTTCCTACCAGCCCAGCTCCAGCCCCCAGAGCTACCACCA < 41bp 1 0.366995698708515 1 0.672664642333984 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964940 chr19:39964938 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_30737 0 0 6 IGF2BP2 POSTAR2 ENCODE chr19:39964872-39965007
64251 chr19 39964932 39964932 1 + C G OV 39964940 + 39964920 39964960 41 GGTTCCTACCAGCCCAGCCCCAGCCCCCAGAGCTACCACCA GGTTCCTACCAGGCCAGCCCCAGCCCCCAGAGCTACCACCA < 41bp 1 0.425574765452411 1 0.720483779907227 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964940 chr19:39964932 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_30738 0 0 6 IGF2BP2 POSTAR2 ENCODE chr19:39964872-39965007
64251 chr12 62931434 62931434 1 + G A OV 62931443 + 62931423 62931463 41 CTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGC CTTGGCGCATTACCATGGGGCTGTTCTTGGAACATCATGGC < 41bp 1 0.115521535115751 1 0.0545776784420013 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62931443 chr12:62931434 nonsynonymous SNV 0.978 4 12 hm5C_associated_SNPs_30739 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:62931421-62931445
64251 chr7 102944373 102944373 1 + A T OV 102944354 + 102944334 102944374 41 AAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAG AAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGTG < 41bp 1 0.601929328025135 1 0.501772940158844 experiment 0.79614134394973 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMPCB ENSG00000105819 CDS Human protein_coding chr7:102944354 chr7:102944373 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_30740 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr7:102944358-102944384
64251 chr3 31674583 31674583 1 + G C OV 31674578 + 31674558 31674598 41 AGCACCTGATAACAGGGAGACATTAGATCACAAACCTCGAG AGCACCTGATAACAGGGAGACATTACATCACAAACCTCGAG < 41bp 1 0.14284062864636 1 0.223733454942703 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STT3B ENSG00000163527 CDS Human protein_coding chr3:31674578 chr3:31674583 nonsynonymous SNV 0.997 2 26 hm5C_associated_SNPs_30741 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr3:31674559-31674585
64251 chr5 142434073 142434073 1 + C T OV 142434062 + 142434042 142434082 41 GCTGAATGGGAGATAAAGACCATCACTAGTGCTCTGAAGAC GCTGAATGGGAGATAAAGACCATCACTAGTGTTCTGAAGAC < 41bp 1 0.343027809712071 1 0.0974161028862 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142434062 chr5:142434073 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_30742 0 0 3 GRWD1 POSTAR2 ENCODE chr5:142434005-142434096
64251 chr19 47876045 47876045 1 + A T OV 47876028 + 47876008 47876048 41 CCATGTTCAGCCTGGTGGAGCCTGTGCTCACCATCGCAGCC CCATGTTCAGCCTGGTGGAGCCTGTGCTCACCATCGCTGCC < 41bp 1 0.0790722887954718 1 0.0816695988178253 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX34 ENSG00000134815 CDS Human protein_coding chr19:47876028 chr19:47876045 synonymous SNV . 0 38 hm5C_associated_SNPs_30743 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:47876014-47876047
64251 chrX 103434385 103434385 1 + T C OV 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTGGGCTCCTCCTTAACGAAGAGGTG < 41bp 1 0.47618171450939 1 0.126292496919632 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434385 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_30744 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:103434363-103434389
64251 chr5 139887569 139887569 1 + G C OV 139887579 + 139887559 139887599 41 AGCCAATGTTGAACATAGGGCAAAGGTAAGCATTTTTTACT AGCCAATGTTCAACATAGGGCAAAGGTAAGCATTTTTTACT < 41bp 1 0.145675766339028 1 0.16583040356636 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139887579 chr5:139887569 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_30745 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:139887531-139887577
64251 chr15 57545612 57545612 1 + C A OV 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC AAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC < 41bp 1 0.225204763562431 1 0.404215723276138 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545612 synonymous SNV . 0 1 hm5C_associated_SNPs_30747 0 0 1 IGF2BP1 POSTAR2 ENCODE chr15:57545594-57545642
64251 chr3 184039178 184039178 1 + C T OV 184039162 + 184039142 184039182 41 CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCA CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATTCCCA < 41bp 1 0.230562115165541 1 0.424950808286667 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039162 chr3:184039178 nonsynonymous SNV 0.997 1 37 hm5C_associated_SNPs_30749 0 0 30 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:184039120-184039220
64251 chr3 184039178 184039178 1 + C T OV 184039163 + 184039143 184039183 41 CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCAG CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATTCCCAG < 41bp 1 0.354570367206136 1 0.822280287742615 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039163 chr3:184039178 nonsynonymous SNV 0.997 1 36 hm5C_associated_SNPs_30750 0 0 30 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:184039120-184039220
64251 chr1 53420448 53420448 1 + A T OV 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGATGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.38992333486534 1 0.162339180707932 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420448 nonsynonymous SNV 0.998 5 4 hm5C_associated_SNPs_30751 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr5 137518372 137518372 1 + G A OV 137518361 + 137518341 137518381 41 AACTTCATCCAACACCTGATCTGAAGCCCTTGCTCTCCAAT AACTTCATCCAACACCTGATCTGAAGCCCTTACTCTCCAAT < 41bp 1 0.688205528246012 1 0.243791610002518 experiment 0.623588943507976 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518361 chr5:137518372 synonymous SNV . 0 32 hm5C_associated_SNPs_30752 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:137518352-137518374
64251 chr20 49195803 49195803 1 + G A OV 49195806 + 49195786 49195826 41 CAGACAGCCGACCAGCTGCGCTTCTCCTACCTGGCTGTGAT CAGACAGCCGACCAGCTACGCTTCTCCTACCTGGCTGTGAT < 41bp 1 0.136933580537789 1 0.0317008197307587 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195806 chr20:49195803 synonymous SNV . 0 18 hm5C_associated_SNPs_30754 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:49195783-49195819
64251 chr6 31928242 31928242 1 + A G OV 31928230 + 31928210 31928250 41 TCTTGCTGGAGAACACAAATCTCTCGGCTACAACCTCCTTG TCTTGCTGGAGAACACAAATCTCTCGGCTACAGCCTCCTTG < 41bp 1 0.367247886687597 1 0.0320837199687958 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31928230 chr6:31928242 nonsynonymous SNV 0.864 2 33 hm5C_associated_SNPs_30755 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:31928240-31928260
64251 chr18 19423144 19423144 1 + T C OV 19423125 + 19423105 19423145 41 TGGATATCCAGAATGTGAACCAACAAACTGCCCTACACCTT TGGATATCCAGAATGTGAACCAACAAACTGCCCTACACCCT < 41bp 1 0.437371506843277 1 0.29427108168602 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19423125 chr18:19423144 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_30757 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:19423125-19423152
64251 chr7 6634132 6634132 1 + C T OV 6634139 + 6634119 6634159 41 CTGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA CTGCTGTTTGGTGTCGGGATCCATTCAGACGCTGAAGCAGA < 41bp 1 0.0415904786052418 1 0.18979811668396 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634139 chr7:6634132 nonsynonymous SNV 0.997 3 14 hm5C_associated_SNPs_30762 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:6634105-6634139
64251 chrX 73045820 73045820 1 - C G OV 73045800 - 73045780 73045820 41 GGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATCTCT CGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATCTCT < 41bp 1 0.531572069592086 1 0.470811605453491 experiment 0.936855860815828 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045800 chrX:73045820 . . 0 1 hm5C_associated_SNPs_30765 0 0 88 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045820 73045820 1 - C G OV 73045803 - 73045783 73045823 41 GGTGGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATC GGTCGACTGTGCCAACGCTACTCCTGGGTTTAATACCCATC < 41bp 1 0.3048410776755 1 0.191034018993378 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045803 chrX:73045820 . . 0 4 hm5C_associated_SNPs_30766 0 0 88 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045820 73045820 1 - C G OV 73045808 - 73045788 73045828 41 AATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAATAC AATTTGGTCGACTGTGCCAACGCTACTCCTGGGTTTAATAC < 41bp 1 0.346614366059228 1 0.0612618029117584 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045808 chrX:73045820 . . 0 9 hm5C_associated_SNPs_30767 0 0 88 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045820 73045820 1 - C G OV 73045811 - 73045791 73045831 41 AATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTAA AATAATTTGGTCGACTGTGCCAACGCTACTCCTGGGTTTAA < 41bp 1 0.32559254562472 1 0.398777276277542 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045811 chrX:73045820 . . 0 12 hm5C_associated_SNPs_30768 0 0 88 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045820 73045820 1 - C G OV 73045812 - 73045792 73045832 41 AAATAATTTGGTGGACTGTGCCAACGCTACTCCTGGGTTTA AAATAATTTGGTCGACTGTGCCAACGCTACTCCTGGGTTTA < 41bp 1 0.0341231754248214 1 0.188932627439499 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045812 chrX:73045820 . . 0 13 hm5C_associated_SNPs_30769 0 0 88 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 133682256 133682256 1 + G A OV 133682272 + 133682252 133682292 41 TCCTGCTCAAGACAGCCACACGAACACGGATCTCCCCCCAG TCCTACTCAAGACAGCCACACGAACACGGATCTCCCCCCAG < 41bp 1 0.206507810678988 1 0.117963463068008 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682272 chr7:133682256 nonsynonymous SNV 0.941 1 5 hm5C_associated_SNPs_30770 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr7 133682256 133682256 1 + G A OV 133682276 + 133682256 133682296 41 GCTCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTC ACTCAAGACAGCCACACGAACACGGATCTCCCCCCAGTGTC < 41bp 1 0.745188023359035 1 0.557802677154541 experiment 0.509623953281931 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133682276 chr7:133682256 nonsynonymous SNV 0.941 1 1 hm5C_associated_SNPs_30771 0 0 1 FXR2 POSTAR2 ENCODE chr7:133682255-133682315
64251 chr6 110501769 110501769 1 + C A OV 110501749 + 110501729 110501769 41 CGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGAC CGGTGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGAA < 41bp 1 0.467141657955436 1 0.557451546192169 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC40 ENSG00000168438 CDS Human protein_coding chr6:110501749 chr6:110501769 nonsynonymous SNV 0.967 1 41 hm5C_associated_SNPs_30772 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:110501735-110501773
64251 chr4 1729572 1729572 1 + C T OV 1729555 + 1729535 1729575 41 TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGCCCT TTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGTCCT < 41bp 1 0.665319562661481 1 0.58119809627533 experiment 0.669360874677039 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729555 chr4:1729572 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_30773 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr4:1729560-1729580
64251 chr14 21963388 21963388 1 + G A OV 21963397 + 21963377 21963417 41 TCTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAA TCTTCTCACAGATTGAGTCTCCTTCTCAGATGGATGTTGAA < 41bp 1 0.0160626575003287 1 0.0700528621673584 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963397 chr14:21963388 nonsynonymous SNV 0.936 0 12 hm5C_associated_SNPs_30774 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr14 21963388 21963388 1 + G A OV 21963398 + 21963378 21963418 41 CTTCTCACAGGTTGAGTCTCCTTCTCAGATGGATGTTGAAT CTTCTCACAGATTGAGTCTCCTTCTCAGATGGATGTTGAAT < 41bp 1 0.0797059110161117 1 0.0459150969982147 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOX4 ENSG00000092203 CDS Human protein_coding chr14:21963398 chr14:21963388 nonsynonymous SNV 0.936 0 11 hm5C_associated_SNPs_30775 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr14:21963388-21963416
64251 chr17 30774043 30774043 1 + G A OV 30774035 + 30774015 30774055 41 GAGCATCCTGGAACTGGGATCTCTCCTGGCAAAGACTGGAC GAGCATCCTGGAACTGGGATCTCTCCTGACAAAGACTGGAC < 41bp 1 0.221703645446455 1 0.357843279838562 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30774035 chr17:30774043 nonsynonymous SNV 0.994 1 29 hm5C_associated_SNPs_30776 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30773966-30774064
64251 chr3 52245377 52245377 1 + G T OV 52245357 + 52245337 52245377 41 ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGG ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGT < 41bp 1 0.139175985959895 1 0.292942702770233 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245357 chr3:52245377 nonsynonymous SNV 0.896 5 41 hm5C_associated_SNPs_30778 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52245370-52245399
64251 chr3 52245377 52245377 1 + G T OV 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGTCTTC < 41bp 1 0.282711791993017 1 0.267013669013977 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245377 nonsynonymous SNV 0.896 5 37 hm5C_associated_SNPs_30779 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52245370-52245399
64251 chrX 100880766 100880766 1 + T A OV 100880746 + 100880726 100880766 41 TCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACT TCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACA < 41bp 1 0.326547659918775 1 0.262279748916626 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880746 chrX:100880766 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_30781 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880766 100880766 1 + T A OV 100880750 + 100880730 100880770 41 CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTT CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACACCTT < 41bp 1 0.57915544549717 1 0.440261274576187 experiment 0.841689109005661 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880750 chrX:100880766 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_30782 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880766 100880766 1 + T A OV 100880753 + 100880733 100880773 41 GAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTTTTG GAAATGAAGAAACCAAACTTCAGGTTCTGAAACACCTTTTG < 41bp 1 0.65733171496105 1 0.722513556480408 experiment 0.685336570077899 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880753 chrX:100880766 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_30783 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880766 100880766 1 + T A OV 100880765 + 100880745 100880785 41 CCAAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAA CCAAACTTCAGGTTCTGAAACACCTTTTGAATTTGGCTGAA < 41bp 1 0.581087384994337 1 0.149421811103821 experiment 0.837825230011326 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880765 chrX:100880766 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_30784 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880766 100880766 1 + T A OV 100880767 + 100880747 100880787 41 AAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAAAA AAACTTCAGGTTCTGAAACACCTTTTGAATTTGGCTGAAAA < 41bp 1 0.0308120422396834 1 0.069230705499649 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880767 chrX:100880766 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_30785 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chrX 100880766 100880766 1 + T A OV 100880781 + 100880761 100880801 41 GAAACTCCTTTTGAATTTGGCTGAAAATCCAGCCATGACTA GAAACACCTTTTGAATTTGGCTGAAAATCCAGCCATGACTA < 41bp 1 0.699024555951144 1 0.507201910018921 experiment 0.601950888097712 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880781 chrX:100880766 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_30786 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100880752-100880784
64251 chr1 12061849 12061849 1 + C T OV 12061838 + 12061818 12061858 41 CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTCAAGTGAGGA CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTTAAGTGAGGA < 41bp 1 0.795396837442602 1 0.763458132743835 experiment 0.409206325114796 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061838 chr1:12061849 stopgain 1.000 1 32 hm5C_associated_SNPs_30787 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:12061840-12061860
64251 chr6 33411300 33411300 1 + G A OV 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGGACCTCTCTTCCAGGGTCCCCAAGCCCC < 41bp 1 0.147152915528202 1 0.232027679681778 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411300 nonsynonymous SNV 0.831 1 26 hm5C_associated_SNPs_30788 0 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr15 93528746 93528746 1 + G A OV 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGACAGTAACTCTGACACTGAGTC < 41bp 1 0.343599340785386 1 0.0797841250896454 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528746 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_30790 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:93528734-93528759
64251 chr12 57604651 57604651 1 + G A OV 57604652 + 57604632 57604672 41 CCCGGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC CCCGGCTTCCTGGGCGACCACTGCCAGTACCGTGAGTGAGC < 41bp 1 0.196694879715126 1 0.13219365477562 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604652 chr12:57604651 nonsynonymous SNV 0.994 1 20 hm5C_associated_SNPs_30793 0 0 2 DDX55 POSTAR2 ENCODE chr12:57604608-57604662
64251 chr12 57604643 57604643 1 + G A OV 57604652 + 57604632 57604672 41 CCCGGCTTCCTGGGCGACCGCTGCCAGTACCGTGAGTGAGC CCCGGCTTCCTAGGCGACCGCTGCCAGTACCGTGAGTGAGC < 41bp 1 0.140709425598204 1 0.226545482873917 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57604652 chr12:57604643 synonymous SNV . 0 12 hm5C_associated_SNPs_30794 0 0 2 DDX55 POSTAR2 ENCODE chr12:57604608-57604662
64251 chr15 22969246 22969246 1 + G A OV 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATATTCCG < 41bp 1 0.469406343667259 1 0.122115910053253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969246 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_30795 0 0 3 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chrX 135593897 135593897 1 + G C OV 135593877 + 135593857 135593897 41 AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAG AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAC < 41bp 1 0.724801097538086 1 0.15141224861145 experiment 0.550397804923827 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593877 chrX:135593897 nonsynonymous SNV 0.806 1 41 hm5C_associated_SNPs_30796 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chrX 135593897 135593897 1 + G C OV 135593880 + 135593860 135593900 41 TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAG TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAACAAG < 41bp 1 0.302679068637831 1 0.115403264760971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593880 chrX:135593897 nonsynonymous SNV 0.806 1 38 hm5C_associated_SNPs_30797 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr1 114483621 114483621 1 + A G OV 114483612 + 114483592 114483632 41 TAGGCCGGGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG TAGGCCGGGGGACATTTGGACAGGTGGCTGAGTGCTGGAAG < 41bp 1 0.655040720289137 1 0.751654505729675 experiment 0.689918559421727 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483612 chr1:114483621 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_30799 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:114483604-114483627
64251 chr13 97928622 97928622 1 + G A OV 97928608 + 97928588 97928628 41 ATGCAAATTTGCTCATCCCCCCAAAAGTTGTCAGGTTGAAA ATGCAAATTTGCTCATCCCCCCAAAAGTTGTCAGATTGAAA < 41bp 1 0.192963209874613 1 0.278047382831573 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MBNL2 ENSG00000139793 CDS Human protein_coding chr13:97928608 chr13:97928622 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_30800 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:97928595-97928633
64251 chr9 117063983 117063983 1 + C T OV 117063993 + 117063973 117064013 41 CCCCAGAGGGCGGCCCGGCCCCCCGGTAGGTAACTGAGTGC CCCCAGAGGGTGGCCCGGCCCCCCGGTAGGTAACTGAGTGC < 41bp 1 0.410021738323252 1 0.390791445970535 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117063993 chr9:117063983 nonsynonymous SNV 0.171 3 11 hm5C_associated_SNPs_30802 0 0 11 BUD13 POSTAR2 ENCODE chr9:117063960-117063995
64251 chr2 64114635 64114635 1 + C A OV 64114634 + 64114614 64114654 41 GGTATTAATGTGCCAAGGAGCCGTTTTCTGCCTGTCAAAAC GGTATTAATGTGCCAAGGAGCAGTTTTCTGCCTGTCAAAAC < 41bp 1 0.416228847197944 1 0.170024275779724 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGP2 ENSG00000169764 CDS Human protein_coding chr2:64114634 chr2:64114635 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_30803 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:64114606-64114649
64251 chr22 26291146 26291146 1 + G A OV 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACGAGTGGCAGATGCGCTTCAACTGTGCTCAGATG < 41bp 1 0.0936772570478851 1 0.366064548492432 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291146 nonsynonymous SNV 0.851 3 27 hm5C_associated_SNPs_30806 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr6 160212129 160212129 1 + G C OV 160212137 + 160212117 160212157 41 GGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACA GGGCTGGCGGACCGTGTTTCCCTCCCGTGAGTTCTGGCACA < 41bp 1 0.209287441302669 1 0.200336426496506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212137 chr6:160212129 synonymous SNV . 0 13 hm5C_associated_SNPs_30809 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:160212120-160212140
64251 chr10 12199963 12199963 1 + C G OV 12199960 + 12199940 12199980 41 CGTTACCGAGGACAGTACAGCAGCTACCCCATCAAACTCTT CGTTACCGAGGACAGTACAGCAGGTACCCCATCAAACTCTT < 41bp 1 0.615494730070314 1 0.629425227642059 experiment 0.769010539859373 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12199960 chr10:12199963 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_30810 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:12199943-12199964
64251 chr2 169622187 169622187 1 + G T OV 169622178 + 169622158 169622198 41 GGTGGGTTTTTAACCTACTGCTATTGCTAGTACAAGGGTTG GGTGGGTTTTTAACCTACTGCTATTGCTATTACAAGGGTTG < 41bp 1 0.0851488229503058 1 0.0948030054569244 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169622178 chr2:169622187 nonsynonymous SNV 0.288 0 30 hm5C_associated_SNPs_30812 0 0 4 HNRNPU POSTAR2 GSE34491,GSM850170 chr2:169622180-169622200
64251 chr17 4623693 4623693 1 + T C OV 4623704 + 4623684 4623724 41 CCAGGGATGTCTCTGTGGAGCTGCCTTTTGTTCTTATGCAC CCAGGGATGCCTCTGTGGAGCTGCCTTTTGTTCTTATGCAC < 41bp 1 0.380767606900518 1 0.0963872373104095 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4623704 chr17:4623693 nonsynonymous SNV 0.989 4 10 hm5C_associated_SNPs_30814 0 0 2 PPIG POSTAR2 ENCODE chr17:4623686-4623709
64251 chr1 114223893 114223893 1 + T C OV 114223895 + 114223875 114223915 41 CTCGAGCAATTGAGCTCATTCAGGCTGGTGGAAATAAAGTT CTCGAGCAATTGAGCTCACTCAGGCTGGTGGAAATAAAGTT < 41bp 1 0.49969808574212 1 0.766658186912537 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114223895 chr1:114223893 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_30815 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:114223885-114223906
64251 chr22 18567998 18567998 1 + G T OV 18567978 + 18567958 18567998 41 CTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGATCCTCTG CTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGATCCTCTT < 41bp 1 0.164041273909878 1 0.116539716720581 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX26 ENSG00000215193 CDS Human protein_coding chr22:18567978 chr22:18567998 nonsynonymous SNV 0.994 2 41 hm5C_associated_SNPs_30816 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:18567944-18568004
64251 chr21 30411809 30411809 1 + C T OV 30411804 + 30411784 30411824 41 CTTTTTGTTTTTCTCTAGAGCAGTGCGGTTTAAAGGCTATC CTTTTTGTTTTTCTCTAGAGCAGTGTGGTTTAAAGGCTATC < 41bp 1 0.321971043728634 1 0.126979678869247 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30411804 chr21:30411809 nonsynonymous SNV 0.939 4 26 hm5C_associated_SNPs_30819 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30411770-30411811
64251 chr5 153760019 153760019 1 + C G OV 153760010 + 153759990 153760030 41 ATCTCTTGGCTTCTTCAGACCGCATTGCTCGGAACCGCAAG ATCTCTTGGCTTCTTCAGACCGCATTGCTGGGAACCGCAAG < 41bp 1 0.191709848997351 1 0.163017392158508 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760010 chr5:153760019 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_30821 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chr5 153760019 153760019 1 + C G OV 153760024 + 153760004 153760044 41 TCAGACCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC TCAGACCGCATTGCTGGGAACCGCAAGACCATTGTGTGCCC < 41bp 1 0.424541239423771 1 0.163029104471207 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760024 chr5:153760019 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_30822 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760011-153760027
64251 chr6 7578101 7578101 1 + T C OV 7578111 + 7578091 7578131 41 AGTCCCCTTCTGGGGTGATTCTGCAAGAGGTATATATGTCA AGTCCCCTTCCGGGGTGATTCTGCAAGAGGTATATATGTCA < 41bp 1 0.674161592329338 1 0.924656450748444 experiment 0.651676815341325 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7578111 chr6:7578101 synonymous SNV . 0 11 hm5C_associated_SNPs_30823 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7578012-7578111
64251 chr7 73922455 73922455 1 + C T OV 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGTGGACC < 41bp 1 0.52409890266677 1 0.162788093090057 experiment 0.95180219466646 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922455 synonymous SNV . 0 36 hm5C_associated_SNPs_30824 0 0 3 DDX3X POSTAR2 ENCODE chr7:73922397-73922477
64251 chr9 131345047 131345047 1 + G A OV 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTACAGC < 41bp 1 0.116239678731588 1 0.103956699371338 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345047 synonymous SNV . 0 37 hm5C_associated_SNPs_30827 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:131345033-131345047
64251 chr11 62550254 62550254 1 + G T OV 62550249 + 62550229 62550269 41 GCAGATCCTGTGCGGCCGCTCTGCTGCCACTATGGAGCCGT GCAGATCCTGTGCGGCCGCTCTGCTTCCACTATGGAGCCGT < 41bp 1 0.678514558419275 1 0.351754814386368 experiment 0.64297088316145 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62550249 chr11:62550254 nonsynonymous SNV 0.983 1 26 hm5C_associated_SNPs_30828 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:62550232-62550272
64251 chr9 104307065 104307065 1 + G A OV 104307070 + 104307050 104307090 41 TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTT TAATCTGATAGTGGAAGAAGCAGTGCAGGAGCTGAACTCTT < 41bp 1 0.311196785114434 1 0.727402687072754 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307070 chr9:104307065 synonymous SNV . 0 16 hm5C_associated_SNPs_30829 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr1 57157075 57157075 1 + T G OV 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGGGATCAGCACTCCAACAGATTTTTTTAT < 41bp 1 0.0568076024247184 1 0.299238264560699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157075 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_30830 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:57157066-57157093
64251 chr14 24568341 24568341 1 + G C OV 24568331 + 24568311 24568351 41 GTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTA GTGCCCGACCAGCGGGAGATCATCTCCTTCCGCAGCGGCTA < 41bp 1 0.316602143273028 1 0.160823702812195 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24568331 chr14:24568341 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_30831 0 0 3 PPIG POSTAR2 ENCODE chr14:24568326-24568378
64251 chr4 26407824 26407824 1 + G A OV 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAACGAGGGGATCAAACAGTACTTATTCTTCAT < 41bp 1 0.30193928344731 1 0.177755862474442 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407824 synonymous SNV . 0 11 hm5C_associated_SNPs_30832 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:26407809-26407840
64251 chr7 100275154 100275154 1 + A G OV 100275144 + 100275124 100275164 41 CACGCCATCCCGCTGCGCTCCTCCTGGGTAATGACCTGTGC CACGCCATCCCGCTGCGCTCCTCCTGGGTAGTGACCTGTGC < 41bp 1 0.579605725820917 1 0.785019516944885 experiment 0.840788548358166 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275144 chr7:100275154 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_30835 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100275124-100275156
64251 chr12 111885191 111885191 1 + C G OV 111885210 + 111885190 111885230 41 TCCTGCTACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAA TGCTGCTACCCCTGGTTCCACGGCCCCATCTCCAGAGTGAA < 41bp 1 0.262506696437719 1 0.50909948348999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111885210 chr12:111885191 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_30836 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:111885189-111885204
64251 chr22 29695301 29695301 1 + C A OV 29695312 + 29695292 29695332 41 GCTTCCTCCCGCCACCCTTTCCGCCCCCGGGTAGGTGCAGG GCTTCCTCCAGCCACCCTTTCCGCCCCCGGGTAGGTGCAGG < 41bp 1 0.217312206255687 1 0.616612732410431 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695312 chr22:29695301 nonsynonymous SNV 0.993 3 10 hm5C_associated_SNPs_30838 0 0 3 GRWD1 POSTAR2 ENCODE chr22:29695282-29695322
64251 chr11 65268687 65268687 1 + T G OV 65268671 + 65268651 65268691 41 TGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTC TGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGGTTTC < 41bp 1 0.721907436267807 1 0.460058242082596 experiment 0.556185127464387 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268671 chr11:65268687 . . 0 37 hm5C_associated_SNPs_30839 0 0 78 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268680-65268760
64251 chr19 49464818 49464818 1 + C A OV 49464798 + 49464778 49464818 41 CCTGTCTCCAGGACGGCCTCCTCTCCTACTTTGGGACGCCC CCTGTCTCCAGGACGGCCTCCTCTCCTACTTTGGGACGCCA < 41bp 1 0.144782781847221 1 0.185932040214539 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAX ENSG00000087088 CDS Human protein_coding chr19:49464798 chr19:49464818 synonymous SNV . 0 41 hm5C_associated_SNPs_30840 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr4 79399115 79399115 1 + T A OV 79399112 + 79399092 79399132 41 GAATTCACCCAGGCGAAGGTCATTATCAACGATACCGAGGA GAATTCACCCAGGCGAAGGTCATAATCAACGATACCGAGGA < 41bp 1 0.118145622756576 1 0.396095305681229 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79399112 chr4:79399115 synonymous SNV . 0 24 hm5C_associated_SNPs_30841 0 0 1 GRWD1 POSTAR2 ENCODE chr4:79399114-79399137
64251 chr22 41735127 41735127 1 + G A OV 41735129 + 41735109 41735149 41 AGGACCCTCCCCAGCACCGACAGCCTGGATGACTTCTCAGA AGGACCCTCCCCAGCACCAACAGCCTGGATGACTTCTCAGA < 41bp 1 0.276254245535558 1 0.218957453966141 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735129 chr22:41735127 nonsynonymous SNV 0.776 1 19 hm5C_associated_SNPs_30842 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41735126-41735183
64251 chr5 176520496 176520496 1 + C G OV 176520483 + 176520463 176520503 41 GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCCGGCCTCG GCGTCTCTCCTCCAGCGGCCCCGCCTTGCTCGCGGGCCTCG < 41bp 1 0.133553830235689 1 0.0607220828533173 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176520483 chr5:176520496 nonsynonymous SNV 0.012 0 34 hm5C_associated_SNPs_30844 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176520475-176520508
64251 chrX 73042907 73042907 1 - A G OV 73042925 - 73042905 73042945 41 GTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGACATAT GTATTTGCTCATTGGTCTGGCTTAGAGACAGGAAGACACAT < 41bp 1 0.0588908362598779 1 0.0474201440811157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042925 chrX:73042907 . . 0 39 hm5C_associated_SNPs_30846 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr17 66038278 66038278 1 + T C OV 66038276 + 66038256 66038296 41 TTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTG TTGATTCCGAAATTTGTGTCCTCCTTGGGCAGAACTGATTG < 41bp 1 0.533931839136298 1 0.802408814430237 experiment 0.932136321727403 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66038276 chr17:66038278 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_30847 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66038202-66038296
64251 chr2 233671363 233671363 1 + A T OV 233671347 + 233671327 233671367 41 GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATG GGGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCTTATG < 41bp 1 0.121527482528067 1 0.0490192174911499 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671347 chr2:233671363 nonsynonymous SNV 0.987 2 37 hm5C_associated_SNPs_30848 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671348 + 233671328 233671368 41 GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGG GGTTCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCTTATGG < 41bp 1 0.18352233617564 1 0.150334060192108 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671348 chr2:233671363 nonsynonymous SNV 0.987 2 36 hm5C_associated_SNPs_30849 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671351 + 233671331 233671371 41 TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAA TCCCTTTTCTCCAGGTCCAGCTCCCCCTCCTCTTATGGTAA < 41bp 1 0.102726110208024 1 0.418337285518646 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671351 chr2:233671363 nonsynonymous SNV 0.987 2 33 hm5C_associated_SNPs_30850 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671354 + 233671334 233671374 41 CTTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTA CTTTTCTCCAGGTCCAGCTCCCCCTCCTCTTATGGTAAGTA < 41bp 1 0.0455916616316666 1 0.06548210978508 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671354 chr2:233671363 nonsynonymous SNV 0.987 2 30 hm5C_associated_SNPs_30851 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671355 + 233671335 233671375 41 TTTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTAC TTTTCTCCAGGTCCAGCTCCCCCTCCTCTTATGGTAAGTAC < 41bp 1 0.0485040549527913 1 0.143973976373672 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671355 chr2:233671363 nonsynonymous SNV 0.987 2 29 hm5C_associated_SNPs_30852 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671356 + 233671336 233671376 41 TTTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACC TTTCTCCAGGTCCAGCTCCCCCTCCTCTTATGGTAAGTACC < 41bp 1 0.0246184888069601 1 0.105941951274872 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671356 chr2:233671363 nonsynonymous SNV 0.987 2 28 hm5C_associated_SNPs_30853 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr2 233671363 233671363 1 + A T OV 233671357 + 233671337 233671377 41 TTCTCCAGGTCCAGCTCCCCCTCCTCATATGGTAAGTACCT TTCTCCAGGTCCAGCTCCCCCTCCTCTTATGGTAAGTACCT < 41bp 1 0.244228277273653 1 0.184727936983109 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233671357 chr2:233671363 nonsynonymous SNV 0.987 2 27 hm5C_associated_SNPs_30854 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:233671336-233671365
64251 chr6 168291648 168291648 1 + G T OV 168291650 + 168291630 168291670 41 AAAGGAGAGAGCTGACGGGTCTGGCTATGGCTCCACCCTTC AAAGGAGAGAGCTGACGGTTCTGGCTATGGCTCCACCCTTC < 41bp 1 0.68211439273427 1 0.389436036348343 experiment 0.63577121453146 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168291650 chr6:168291648 synonymous SNV . 0 19 hm5C_associated_SNPs_30855 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:168291647-168291648
64251 chr14 37754635 37754635 1 + G A OV 37754619 + 37754599 37754639 41 GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGGAAA GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATAGAAA < 41bp 1 0.493624092074788 1 0.514828979969025 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37754619 chr14:37754635 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_30856 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr14:37754613-37754646
64251 chr1 153742690 153742690 1 + G C OV 153742703 + 153742683 153742723 41 TAGACTGGGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTC TAGACTGCGAGACCTTTGAGCAGTATTGTGCCTGGCAGCTC < 41bp 1 0.593389925138645 1 0.196445226669312 experiment 0.813220149722711 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153742703 chr1:153742690 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_30857 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:153742676-153742708
64251 chr2 200820552 200820552 1 + T A OV 200820570 + 200820550 200820590 41 AGTTCCTGCACTCTCGGTCGCTGCCCTGCGGGGCCGTCCGA AGATCCTGCACTCTCGGTCGCTGCCCTGCGGGGCCGTCCGA < 41bp 1 0.720072681606578 1 0.0517230629920959 experiment 0.559854636786843 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820570 chr2:200820552 nonsynonymous SNV 0.000 0 3 hm5C_associated_SNPs_30858 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:200820542-200820577
64251 chr4 5733349 5733349 1 + G T OV 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCAGCCGCACCTTCCTCCGTGTGAACGCCTTCCC < 41bp 1 0.0520740321035781 1 0.149190127849579 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733349 synonymous SNV . 0 27 hm5C_associated_SNPs_30859 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr19 803583 803583 1 + C A OV 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTATACTT < 41bp 1 0.354895889401893 1 0.272875726222992 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803583 nonsynonymous SNV 0.397 3 36 hm5C_associated_SNPs_30860 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr15 57554348 57554348 1 + T C OV 57554338 + 57554318 57554358 41 CAGTCTCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCA CAGTCTCAATGGCAATCATTCAGTCCTGTCCAGTACAGTCA < 41bp 1 0.177239582214747 1 0.15810638666153 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554338 chr15:57554348 synonymous SNV . 0 31 hm5C_associated_SNPs_30861 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554348 57554348 1 + T C OV 57554343 + 57554323 57554363 41 TCAATGGCAATCATTCAGTCCTGTCTAGTACAGTCACTACT TCAATGGCAATCATTCAGTCCTGTCCAGTACAGTCACTACT < 41bp 1 0.0762079613031254 1 0.0329412221908569 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554343 chr15:57554348 synonymous SNV . 0 26 hm5C_associated_SNPs_30862 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554348 57554348 1 + T C OV 57554353 + 57554333 57554373 41 TCATTCAGTCCTGTCTAGTACAGTCACTACTTCAAGCACAG TCATTCAGTCCTGTCCAGTACAGTCACTACTTCAAGCACAG < 41bp 1 0.142608774060143 1 0.0714970529079437 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554353 chr15:57554348 synonymous SNV . 0 16 hm5C_associated_SNPs_30863 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554348 57554348 1 + T C OV 57554357 + 57554337 57554377 41 TCAGTCCTGTCTAGTACAGTCACTACTTCAAGCACAGACCT TCAGTCCTGTCCAGTACAGTCACTACTTCAAGCACAGACCT < 41bp 1 0.512401031735325 1 0.267135560512543 experiment 0.97519793652935 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554357 chr15:57554348 synonymous SNV . 0 12 hm5C_associated_SNPs_30864 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554348 57554348 1 + T C OV 57554359 + 57554339 57554379 41 AGTCCTGTCTAGTACAGTCACTACTTCAAGCACAGACCTGA AGTCCTGTCCAGTACAGTCACTACTTCAAGCACAGACCTGA < 41bp 1 0.344953886115236 1 0.0856913626194 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554359 chr15:57554348 synonymous SNV . 0 10 hm5C_associated_SNPs_30865 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554348 57554348 1 + T C OV 57554365 + 57554345 57554385 41 GTCTAGTACAGTCACTACTTCAAGCACAGACCTGAACCATA GTCCAGTACAGTCACTACTTCAAGCACAGACCTGAACCATA < 41bp 1 0.228313989845441 1 0.524740040302277 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554365 chr15:57554348 synonymous SNV . 0 4 hm5C_associated_SNPs_30866 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr7 99123760 99123760 1 + G C OV 99123761 + 99123741 99123781 41 AACTTTATTCAGCATCGGCGCATCCACACTGGAGAAAAACC AACTTTATTCAGCATCGGCCCATCCACACTGGAGAAAAACC < 41bp 1 0.0289866326601753 1 0.104123681783676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123761 chr7:99123760 nonsynonymous SNV 0.992 4 20 hm5C_associated_SNPs_30867 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:99123740-99123760
64251 chr17 27000471 27000471 1 + G A OV 27000491 + 27000471 27000511 41 GATGAAGGCGAGGTGGTACCCCGAGTCACCAAGAAATTTGT AATGAAGGCGAGGTGGTACCCCGAGTCACCAAGAAATTTGT < 41bp 1 0.433259286172578 1 0.806407928466797 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27000491 chr17:27000471 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_30868 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:27000460-27000480
64251 chr20 35862446 35862446 1 + C T OV 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTTTC < 41bp 1 0.442357620219012 1 0.359706193208694 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862446 synonymous SNV . 0 39 hm5C_associated_SNPs_30869 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:35862431-35862458
64251 chr17 73486372 73486372 1 + A C OV 73486373 + 73486353 73486393 41 AGTCCTCTGGGTTCTGGCAACTGCCTGTGGAGAGGCCCGTG AGTCCTCTGGGTTCTGGCACCTGCCTGTGGAGAGGCCCGTG < 41bp 1 0.432508435215001 1 0.0931978821754456 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73486373 chr17:73486372 nonsynonymous SNV 0.973 3 20 hm5C_associated_SNPs_30870 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:73486354-73486392
64251 chr10 105172955 105172955 1 + G A OV 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACAGCCTGGACACCCACTCACCCGACTCTCTTGCC < 41bp 1 0.151664942161367 1 0.0667211711406708 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172955 nonsynonymous SNV 0.490 0 18 hm5C_associated_SNPs_30871 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr3 10127584 10127584 1 + C A OV 10127599 + 10127579 10127619 41 ACAGCCAGCCTTTGGAGGAACTACTCAGGTGAGTCATAACT ACAGCAAGCCTTTGGAGGAACTACTCAGGTGAGTCATAACT < 41bp 1 0.16363660049984 1 0.074846088886261 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10127599 chr3:10127584 nonsynonymous SNV 0.103 0 6 hm5C_associated_SNPs_30875 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:10127551-10127593
64251 chr10 17276768 17276768 1 + G A OV 17276757 + 17276737 17276777 41 CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT CGCCAGGCAAAGCAGGAGTCCACTGAGTACCAGAGACAGGT < 41bp 1 0.27838676799081 1 0.121511608362198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276757 chr10:17276768 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_30876 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr10 124921870 124921870 1 + A G OV 124921851 + 124921831 124921871 41 ATGCCTTCAAATGTCACAGACTAAAAGAAAATAATATTGAG ATGCCTTCAAATGTCACAGACTAAAAGAAAATAATATTGGG < 41bp 1 0.496299526726891 1 0.5065798163414 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BUB3 ENSG00000154473 CDS Human protein_coding chr10:124921851 chr10:124921870 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_30877 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:124921782-124921914
64251 chr19 18679363 18679363 1 + C T OV 18679364 + 18679344 18679384 41 TGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGC TGAGCCCCGGCTTCGAGGATCTGTCCCATGTCCAGCCTGGC < 41bp 1 0.173428702720202 1 0.0972526669502258 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KXD1 ENSG00000105700 CDS Human protein_coding chr19:18679364 chr19:18679363 synonymous SNV . 0 20 hm5C_associated_SNPs_30879 0 0 1 UPF1 POSTAR2 ENCODE chr19:18679296-18679363
64251 chr21 17250151 17250151 1 + G C OV 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTC < 41bp 1 0.518039027149889 1 0.406304895877838 experiment 0.963921945700221 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250151 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_30880 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chr19 42392892 42392892 1 + G A OV 42392901 + 42392881 42392921 41 CCCACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTT CCCACCTCATGACCCTCCTGCAGCACGTGGCCCTGCAGTTT < 41bp 1 0.499768995804621 1 0.346749097108841 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392901 chr19:42392892 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_30881 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:42392875-42392900
64251 chr19 42392892 42392892 1 + G A OV 42392911 + 42392891 42392931 41 GGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGAC GACCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGAC < 41bp 1 0.073877379583343 1 0.0664577186107635 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392911 chr19:42392892 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_30882 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:42392875-42392900
64251 chr6 3015782 3015782 1 + A T OV 3015789 + 3015769 3015809 41 GCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA GCTGTACTGGTTCTGCGTGCCAGCCATCCTGAAGGGCTGGA < 41bp 1 0.432495953842077 1 0.236064076423645 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015789 chr6:3015782 nonsynonymous SNV 0.488 4 14 hm5C_associated_SNPs_30883 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr3 61975351 61975351 1 + T A OV 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGCTGTGGGGGCCGACACCAGTCTCCTATTGAC < 41bp 1 0.29066988102299 1 0.441435992717743 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975351 synonymous SNV . 0 23 hm5C_associated_SNPs_30884 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr6 31602045 31602045 1 + C G OV 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTGTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG < 41bp 1 0.541203188987209 1 0.207151740789413 experiment 0.917593622025582 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602045 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_30885 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:31601988-31602046
64251 chr6 31602045 31602045 1 + C G OV 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTGTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG < 41bp 1 0.530479647712105 1 0.804163336753845 experiment 0.93904070457579 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602045 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_30886 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:31601988-31602046
64251 chr18 13096261 13096261 1 + C T OV 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTGGCCAGTGCATTGCCTCACAGTCACGCCGCAGCATGGAT < 41bp 1 0.114787349240405 1 0.0915606617927551 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096261 nonsynonymous SNV 0.992 4 9 hm5C_associated_SNPs_30887 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:13096223-13096262
64251 chr8 48883167 48883167 1 + G A OV 48883170 + 48883150 48883190 41 ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG ACATCTTGCTGTGTGGCAACCCTGGTACCAGCAAGTCCCAG < 41bp 1 0.381784460793978 1 0.416838347911835 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883170 chr8:48883167 nonsynonymous SNV 0.912 4 18 hm5C_associated_SNPs_30888 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr8:48883075-48883173
64251 chr18 13096263 13096263 1 + C T OV 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTGGCCAGCGTATTGCCTCACAGTCACGCCGCAGCATGGAT < 41bp 1 0.114560790276324 1 0.148914635181427 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096263 nonsynonymous SNV 0.991 4 11 hm5C_associated_SNPs_30889 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr18:13096240-13096264
64251 chr2 217364707 217364707 1 + C T OV 217364687 + 217364667 217364707 41 TATAGACCAAGATGAAGAGACGAGCTGTGGGGATCTGGCAC TATAGACCAAGATGAAGAGACGAGCTGTGGGGATCTGGCAT < 41bp 1 0.620629675424509 1 0.458844125270844 experiment 0.758740649150982 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364687 chr2:217364707 synonymous SNV . 0 41 hm5C_associated_SNPs_30890 0 0 77 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364707 217364707 1 + C T OV 217364705 + 217364685 217364725 41 GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG GACGAGCTGTGGGGATCTGGCATTGTGGTTCCTGCATGAAG < 41bp 1 0.41594933357456 1 0.121790856122971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364705 chr2:217364707 synonymous SNV . 0 23 hm5C_associated_SNPs_30891 0 0 77 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr7 99661772 99661772 1 + A C OV 99661756 + 99661736 99661776 41 GTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCAAACC GTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCCAACC < 41bp 1 0.152105124983439 1 0.0340260565280914 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99661756 chr7:99661772 nonsynonymous SNV 0.993 1 37 hm5C_associated_SNPs_30892 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:99661751-99661787
64251 chr19 46509877 46509877 1 + C A OV 46509891 + 46509871 46509911 41 CGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC CGGAACAGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC < 41bp 1 0.122427568762207 1 0.0816678404808044 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509891 chr19:46509877 nonsynonymous SNV 0.937 1 7 hm5C_associated_SNPs_30893 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr19 46509877 46509877 1 + C A OV 46509892 + 46509872 46509912 41 GGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC GGAACAGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC < 41bp 1 0.29136637264222 1 0.0567793548107147 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509892 chr19:46509877 nonsynonymous SNV 0.937 1 6 hm5C_associated_SNPs_30894 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr3 38022322 38022322 1 + C T OV 38022310 + 38022290 38022330 41 CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAG CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGATGTGTACAG < 41bp 1 0.769033934206609 1 0.688433170318604 experiment 0.461932131586782 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022310 chr3:38022322 synonymous SNV . 0 33 hm5C_associated_SNPs_30895 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022293-38022327
64251 chr21 47975908 47975908 1 + A C OV 47975902 + 47975882 47975922 41 TCCTGTTTAACAGATGACATCCCAAAAAAGAAGATAGCAAG TCCTGTTTAACAGATGACATCCCAAACAAGAAGATAGCAAG < 41bp 1 0.167245317910054 1 0.518504977226257 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47975902 chr21:47975908 nonsynonymous SNV 0.995 4 27 hm5C_associated_SNPs_30896 0 0 1 PPIG POSTAR2 ENCODE chr21:47975900-47975960
64251 chr19 10935775 10935775 1 + G T OV 10935765 + 10935745 10935785 41 GATGGGGCCCAGGAGAACACCTTCTCCATGGACCCCCAACT GATGGGGCCCAGGAGAACACCTTCTCCATGTACCCCCAACT < 41bp 1 0.143973997743491 1 0.156082719564438 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10935765 chr19:10935775 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_30897 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:10935760-10935781
64251 chrX 47104861 47104861 1 + C A OV 47104877 + 47104857 47104897 41 AGACCCTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCG AGACACTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCG < 41bp 1 0.317365447215309 1 0.293574452400208 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47104877 chrX:47104861 synonymous SNV . 0 5 hm5C_associated_SNPs_30898 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chrX:47104831-47104866
64251 chrX 47104862 47104862 1 + C T OV 47104877 + 47104857 47104897 41 AGACCCTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCG AGACCTTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCG < 41bp 1 0.308925848232844 1 0.275924861431122 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47104877 chrX:47104862 synonymous SNV . 0 6 hm5C_associated_SNPs_30899 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chrX:47104831-47104866
64251 chr22 35661148 35661148 1 + C A OV 35661146 + 35661126 35661166 41 CGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCC CGGAAAAAGCACAAGTCATCCTAAGACGCACATTCATCTCC < 41bp 1 0.720167313281742 1 0.350582599639893 experiment 0.559665373436516 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661146 chr22:35661148 stopgain 0.999 0 23 hm5C_associated_SNPs_30900 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:35661134-35661182
64251 chr5 122154677 122154677 1 + G T OV 122154694 + 122154674 122154714 41 TCAGAACTACTTAGTGACTACATTCGTCTTATTGCTGCAGT TCATAACTACTTAGTGACTACATTCGTCTTATTGCTGCAGT < 41bp 1 0.0482855468310524 1 0.0803884565830231 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122154694 chr5:122154677 stopgain 1.000 1 4 hm5C_associated_SNPs_30901 0 0 6 HNRNPU POSTAR2 GSE34491,GSM850171 chr5:122154660-122154680
64251 chr12 56214111 56214111 1 + C T OV 56214120 + 56214100 56214140 41 CAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAG CAGCCTCATTGTTAAGTGTACTGCTGCCGAAGTTGCCCCAG < 41bp 1 0.66383544122111 1 0.168861329555511 experiment 0.672329117557779 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214120 chr12:56214111 synonymous SNV . 0 12 hm5C_associated_SNPs_30903 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:56214076-56214114
64251 chr12 56214111 56214111 1 + C T OV 56214123 + 56214103 56214143 41 CCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTC CCTCATTGTTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTC < 41bp 1 0.601419110063823 1 0.206924140453339 experiment 0.797161779872355 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214123 chr12:56214111 synonymous SNV . 0 9 hm5C_associated_SNPs_30904 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:56214076-56214114
64251 chr6 42975966 42975966 1 + C T OV 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTACGAGACGGAGCATCACAATGGGATTGCTGAG < 41bp 1 0.286163938499647 1 0.0279779732227325 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975966 synonymous SNV . 0 29 hm5C_associated_SNPs_30905 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42975963-42975990
64251 chr17 39974695 39974695 1 + G T OV 39974691 + 39974671 39974711 41 TCTGGTTGGCTGATCAAGGGCATGGACCAGGGGCTGCTGGG TCTGGTTGGCTGATCAAGGGCATGTACCAGGGGCTGCTGGG < 41bp 1 0.209977661456764 1 0.111507475376129 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974691 chr17:39974695 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_30906 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr17 39974695 39974695 1 + G T OV 39974698 + 39974678 39974718 41 GGCTGATCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGT GGCTGATCAAGGGCATGTACCAGGGGCTGCTGGGCATGTGT < 41bp 1 0.775825302596546 1 0.957520365715027 experiment 0.448349394806908 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974698 chr17:39974695 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_30907 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr17 39974695 39974695 1 + G T OV 39974704 + 39974684 39974724 41 TCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGTCCTGGA TCAAGGGCATGTACCAGGGGCTGCTGGGCATGTGTCCTGGA < 41bp 1 0.222916578001124 1 0.0371689796447754 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974704 chr17:39974695 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_30908 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr17 39974695 39974695 1 + G T OV 39974712 + 39974692 39974732 41 ATGGACCAGGGGCTGCTGGGCATGTGTCCTGGAGAGAGAAG ATGTACCAGGGGCTGCTGGGCATGTGTCCTGGAGAGAGAAG < 41bp 1 0.235546002277816 1 0.287831604480743 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974712 chr17:39974695 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_30909 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr2 97464908 97464908 1 + G A OV 97464916 + 97464896 97464936 41 AGTACTACGCCCGCCATTACCTGTACACCCGAAATAAGCCG AGTACTACGCCCACCATTACCTGTACACCCGAAATAAGCCG < 41bp 1 0.531198078321704 1 0.746360063552856 experiment 0.937603843356592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97464916 chr2:97464908 nonsynonymous SNV 0.614 0 13 hm5C_associated_SNPs_30912 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:97464897-97464918
64251 chr19 4323380 4323380 1 + G C OV 4323383 + 4323363 4323403 41 ATGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG ATGCCCGCACCAAACAACTGCTGCACACTTTCAAGACCAGG < 41bp 1 0.348369068626133 1 0.218527227640152 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323383 chr19:4323380 nonsynonymous SNV 0.581 0 18 hm5C_associated_SNPs_30913 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4323342-4323387
64251 chr2 232573422 232573422 1 + A G OV 232573427 + 232573407 232573447 41 GTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCG GTGCCCCACCATGTCGGACGCAGCCGTAGACACCAGCTCCG < 41bp 1 0.666741442809157 1 0.3267542719841 experiment 0.666517114381687 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514;ENSG00000187514 exonic;splicing Human other chr2:232573427 chr2:232573422 synonymous SNV 0.998 0 16 hm5C_associated_SNPs_30915 0 0 3 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr2 232573422 232573422 1 + A G OV 232573430 + 232573410 232573450 41 CCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAA CCCCACCATGTCGGACGCAGCCGTAGACACCAGCTCCGAAA < 41bp 1 0.601209971299281 1 0.270610332489014 experiment 0.797580057401439 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514;ENSG00000187514 exonic;splicing Human other chr2:232573430 chr2:232573422 synonymous SNV 0.998 0 13 hm5C_associated_SNPs_30916 0 0 3 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr2 232573422 232573422 1 + A G OV 232573440 + 232573420 232573460 41 TCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAA TCGGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAA < 41bp 1 0.736889168322625 1 0.395620286464691 experiment 0.52622166335475 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514;ENSG00000187514 exonic;splicing Human other chr2:232573440 chr2:232573422 synonymous SNV 0.998 0 3 hm5C_associated_SNPs_30917 0 0 3 UCHL5 POSTAR2 ENCODE chr2:232573381-232573425
64251 chr3 107524253 107524253 1 + G T OV 107524266 + 107524246 107524286 41 ATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATT ATGGACATCCAAAAGAAATGCCGCAGGCTCCTGTACTTATT < 41bp 1 0.471517580301031 1 0.236049383878708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BBX ENSG00000114439 CDS Human protein_coding chr3:107524266 chr3:107524253 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_30919 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:107524226-107524253
64251 chr1 16199349 16199349 1 + G T OV 16199355 + 16199335 16199375 41 AATTCTTCCCAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT AATTCTTCCCAAGATGGGATCTGAAGGAGGAGTGGCTGCCT < 41bp 1 0.436874254361881 1 0.849797070026398 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199355 chr1:16199349 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_30920 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:16199300-16199360
64251 chr3 150289799 150289799 1 + G T OV 150289790 + 150289770 150289810 41 AGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATG AGTTTGGAATTCTAGTTCTACTGAGTTTTTTGCTGTATATG < 41bp 1 0.526901962200554 1 0.1360764503479 experiment 0.946196075598892 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150289790 chr3:150289799 nonsynonymous SNV 0.999 4 30 hm5C_associated_SNPs_30921 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:150289763-150289811
64251 chr2 46611660 46611660 1 + G C OV 46611654 + 46611634 46611674 41 AACCCTTCTTTCAGGCATGGCAAGCCGGCTGCTCGGGCCCT AACCCTTCTTTCAGGCATGGCAAGCCCGCTGCTCGGGCCCT < 41bp 1 0.174331303349905 1 0.319557785987854 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46611654 chr2:46611660 nonsynonymous SNV 0.958 2 27 hm5C_associated_SNPs_30922 0 0 1 U2AF2 POSTAR2 ENCODE chr2:46611641-46611686
64251 chr2 46611661 46611661 1 + G C OV 46611654 + 46611634 46611674 41 AACCCTTCTTTCAGGCATGGCAAGCCGGCTGCTCGGGCCCT AACCCTTCTTTCAGGCATGGCAAGCCGCCTGCTCGGGCCCT < 41bp 1 0.19054115370828 1 0.490718930959702 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46611654 chr2:46611661 synonymous SNV . 0 28 hm5C_associated_SNPs_30923 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:46611661-46611679
64251 chr16 2489417 2489417 1 + A T OV 2489428 + 2489408 2489448 41 GGATGTCTGACCAGCTCCTACCTCCTCTGGGAAAGCGACAG GGATGTCTGTCCAGCTCCTACCTCCTCTGGGAAAGCGACAG < 41bp 1 0.033132976713371 1 0.0552080273628235 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNF ENSG00000162063 CDS Human protein_coding chr16:2489428 chr16:2489417 nonsynonymous SNV 0.134 0 10 hm5C_associated_SNPs_30924 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2489416-2489436
64251 chr7 150769178 150769178 1 + G A OV 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTAATCTCACT < 41bp 1 0.0611558556290791 1 0.0546144843101501 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769178 synonymous SNV . 0 33 hm5C_associated_SNPs_30925 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:150769150-150769178
64251 chr2 36739482 36739482 1 + C T OV 36739473 + 36739453 36739493 41 AAATGTCCAGAGCTCTCATGCAGTAAGATCTGCCCCTTGGG AAATGTCCAGAGCTCTCATGCAGTAAGATTTGCCCCTTGGG < 41bp 1 0.409825454026642 1 0.326364398002625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36739473 chr2:36739482 synonymous SNV . 0 30 hm5C_associated_SNPs_30927 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr2:36739472-36739493
64251 chr18 29116349 29116349 1 + A T OV 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGTCATTGACAATCCACCTGGCATGGCAGAAAAA < 41bp 1 0.143457195902136 1 0.246951103210449 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116349 nonsynonymous SNV 0.452 1 20 hm5C_associated_SNPs_30929 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr18:29116331-29116350
64251 chr18 29116349 29116349 1 + A T OV 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGTCATTGACAATCCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.433585336990598 1 0.104413658380508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116349 nonsynonymous SNV 0.452 1 16 hm5C_associated_SNPs_30930 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr18:29116331-29116350
64251 chr18 29116349 29116349 1 + A T OV 29116363 + 29116343 29116383 41 TGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCAC TGACAATCCACCTGGCATGGCAGAAAAATGGAAAATAGCAC < 41bp 1 0.486737660916388 1 0.313675701618195 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116363 chr18:29116349 nonsynonymous SNV 0.452 1 7 hm5C_associated_SNPs_30931 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr18:29116331-29116350
64251 chr19 13049527 13049527 1 + C T OV 13049544 + 13049524 13049564 41 CTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAA CTCTTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAA < 41bp 1 0.668092368674405 1 0.693444848060608 experiment 0.66381526265119 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049544 chr19:13049527 nonsynonymous SNV 0.975 0 4 hm5C_associated_SNPs_30932 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13049420-13049540
64251 chr5 135369461 135369461 1 + G T OV 135369452 + 135369432 135369472 41 TCTGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCA TCTGCTGCTTTTGTTTTCAGCCCCAACGTTTGTGCTGTGCA < 41bp 1 0.150858079290026 1 0.328737080097198 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369452 chr5:135369461 synonymous SNV . 0 30 hm5C_associated_SNPs_30933 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:135369460-135369500
64251 chr5 135369461 135369461 1 + G T OV 135369453 + 135369433 135369473 41 CTGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAG CTGCTGCTTTTGTTTTCAGCCCCAACGTTTGTGCTGTGCAG < 41bp 1 0.179815909882583 1 0.101566195487976 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369453 chr5:135369461 synonymous SNV . 0 29 hm5C_associated_SNPs_30934 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:135369460-135369500
64251 chr5 135369461 135369461 1 + G T OV 135369454 + 135369434 135369474 41 TGCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAGA TGCTGCTTTTGTTTTCAGCCCCAACGTTTGTGCTGTGCAGA < 41bp 1 0.0231095399921386 1 0.121606141328812 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369454 chr5:135369461 synonymous SNV . 0 28 hm5C_associated_SNPs_30935 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:135369460-135369500
64251 chr5 135369461 135369461 1 + G T OV 135369455 + 135369435 135369475 41 GCTGCTTTTGTTTTCAGCCCCAACGTGTGTGCTGTGCAGAA GCTGCTTTTGTTTTCAGCCCCAACGTTTGTGCTGTGCAGAA < 41bp 1 0.302309874412558 1 0.11550384759903 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TGFBI ENSG00000120708 CDS Human protein_coding chr5:135369455 chr5:135369461 synonymous SNV . 0 27 hm5C_associated_SNPs_30936 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:135369460-135369500
64251 chr3 9859419 9859419 1 + G T OV 9859427 + 9859407 9859447 41 TGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGGTAA TGCCTGGGGGCTTAGGATGACAAAAAAGCCTTCATAGGTAA < 41bp 1 0.534851978567861 1 0.559752702713013 experiment 0.930296042864277 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9859427 chr3:9859419 stopgain 1.000 0 13 hm5C_associated_SNPs_30937 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:9859378-9859425
64251 chr5 147819268 147819268 1 + G T OV 147819249 + 147819229 147819269 41 AGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGT AGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTTT < 41bp 1 0.24677964792758 1 0.035656750202179 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819249 chr5:147819268 nonsynonymous SNV 0.997 2 40 hm5C_associated_SNPs_30938 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819268 147819268 1 + G T OV 147819251 + 147819231 147819271 41 CAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTAT CAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTTTAT < 41bp 1 0.130836588733346 1 0.0277892649173737 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819251 chr5:147819268 nonsynonymous SNV 0.997 2 38 hm5C_associated_SNPs_30939 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819268 147819268 1 + G T OV 147819256 + 147819236 147819276 41 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCC GCTATTTAGTGGTCCCTACCCCTATCACATCTTTATTATCC < 41bp 1 0.08463206737825 1 0.089014858007431 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819256 chr5:147819268 nonsynonymous SNV 0.997 2 33 hm5C_associated_SNPs_30940 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr5 147819268 147819268 1 + G T OV 147819257 + 147819237 147819277 41 CTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCA CTATTTAGTGGTCCCTACCCCTATCACATCTTTATTATCCA < 41bp 1 0.0832039829415712 1 0.340149104595184 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819257 chr5:147819268 nonsynonymous SNV 0.997 2 32 hm5C_associated_SNPs_30941 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:147819247-147819279
64251 chr10 24817002 24817002 1 + C A OV 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAAATCTGGAGATGCCGCCAGCCACAGGACCACTG < 41bp 1 0.125301997146103 1 0.167505383491516 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24817002 synonymous SNV . 0 35 hm5C_associated_SNPs_30942 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24817002 24817002 1 + C A OV 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATCTGGAGATGCCGCCAGCCACAGGACCACTGCCAA < 41bp 1 0.229444099854574 1 0.701178073883057 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24817002 synonymous SNV . 0 31 hm5C_associated_SNPs_30943 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chrX 48759276 48759276 1 + C A OV 48759267 + 48759247 48759287 41 TCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCAA TCCTGGCTCTCCCCACATGACCCCAACTCAGTGGTTACCAA < 41bp 1 0.684284229293679 1 0.0465203523635864 experiment 0.631431541412642 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759267 chrX:48759276 synonymous SNV . 0 30 hm5C_associated_SNPs_30944 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr1 39751390 39751390 1 + C T OV 39751378 + 39751358 39751398 41 TCAGGCAGCTGCAGGTGGATCTCCAGATCCTGCGGGATGAG TCAGGCAGCTGCAGGTGGATCTCCAGATCCTGTGGGATGAG < 41bp 1 0.478065328560372 1 0.890841662883759 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39751378 chr1:39751390 nonsynonymous SNV 0.995 4 33 hm5C_associated_SNPs_30945 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr1:39751365-39751398
64251 chr11 994220 994220 1 + C G OV 994214 + 994194 994234 41 TGTGGACGTGAACGGGGGTCCTGAGCCTGCCCCAGCCAGTA TGTGGACGTGAACGGGGGTCCTGAGCGTGCCCCAGCCAGTA < 41bp 1 0.522866514941424 1 0.270213663578033 experiment 0.954266970117153 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:994214 chr11:994220 nonsynonymous SNV 0.006 1 27 hm5C_associated_SNPs_30946 0 0 5 BUD13 POSTAR2 ENCODE chr11:994147-994259
64251 chr19 54711372 54711372 1 + C A OV 54711362 + 54711342 54711382 41 CGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAG CGCTCTCCCTACGGGGGTGGCCGCCCGGGCAGCGTGAAGAG < 41bp 1 0.366316675425542 1 0.130010962486267 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711362 chr19:54711372 nonsynonymous SNV 0.701 3 31 hm5C_associated_SNPs_30949 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54711299-54711392
64251 chr19 54711372 54711372 1 + C A OV 54711363 + 54711343 54711383 41 GCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGG GCTCTCCCTACGGGGGTGGCCGCCCGGGCAGCGTGAAGAGG < 41bp 1 0.574909722583831 1 0.269537329673767 experiment 0.850180554832338 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711363 chr19:54711372 nonsynonymous SNV 0.701 3 30 hm5C_associated_SNPs_30950 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54711299-54711392
64251 chr19 18966734 18966734 1 + G A OV 18966735 + 18966715 18966755 41 TGCCCCAATGGTGTTGCAGGCCGGTGCTGGTGTGTGCTCCG TGCCCCAATGGTGTTGCAGACCGGTGCTGGTGTGTGCTCCG < 41bp 1 0.36107648923401 1 0.337171137332916 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966735 chr19:18966734 synonymous SNV . 0 20 hm5C_associated_SNPs_30954 0 0 8 BUD13 POSTAR2 ENCODE chr19:18966710-18966788
64251 chr14 61285485 61285485 1 + G C OV 61285479 + 61285459 61285499 41 TTGCTCTGCTTTTGGCTCAGCATAAAGATAGATCTACCCAA TTGCTCTGCTTTTGGCTCAGCATAAACATAGATCTACCCAA < 41bp 1 0.32888527514544 1 0.169232934713364 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61285479 chr14:61285485 nonsynonymous SNV 0.954 1 27 hm5C_associated_SNPs_30956 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:61285459-61285522
64251 chr19 36593926 36593926 1 + G A OV 36593911 + 36593891 36593931 41 TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGC TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCAGAAGC < 41bp 1 0.288642916372472 1 0.172226279973984 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593911 chr19:36593926 nonsynonymous SNV 0.017 1 36 hm5C_associated_SNPs_30957 0 0 3 GRWD1 POSTAR2 ENCODE chr19:36593855-36593944
64251 chr19 36593926 36593926 1 + G A OV 36593920 + 36593900 36593940 41 CAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGA CAGAGGTCAAGCTCATGGACCGAGGCAGAAGCCAGCCCAGA < 41bp 1 0.446477514852183 1 0.86842006444931 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593920 chr19:36593926 nonsynonymous SNV 0.017 1 27 hm5C_associated_SNPs_30958 0 0 3 GRWD1 POSTAR2 ENCODE chr19:36593855-36593944
64251 chr22 45958907 45958907 1 + C T OV 45958896 + 45958876 45958916 41 CACCAACATCCAAGCGCCCGCGGTGGTTTTCCGCATGGGCC CACCAACATCCAAGCGCCCGCGGTGGTTTTCTGCATGGGCC < 41bp 1 0.436405723212319 1 0.4760382771492 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45958896 chr22:45958907 nonsynonymous SNV 0.999 3 32 hm5C_associated_SNPs_30960 0 0 7 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr22:45958892-45958913
64251 chr6 31602076 31602076 1 + C A OV 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTAAG < 41bp 1 0.469263608927693 1 0.291495233774185 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602076 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_30961 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTAAGG < 41bp 1 0.504686154582552 1 0.852639973163605 experiment 0.990627690834895 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602076 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_30962 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602066 + 31602046 31602086 41 TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTC TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTAAGGCAGAGTC < 41bp 1 0.247489713136818 1 0.454886317253113 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602066 chr6:31602076 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_30963 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCAGGCCCTAAGGCAGAGTCCAGAGA < 41bp 1 0.336524479103029 1 0.0827689170837402 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602076 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_30964 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCAGGCCCTAAGGCAGAGTCCAGAGAT < 41bp 1 0.262771829147492 1 0.181120455265045 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602076 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_30965 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCAGGCCCTAAGGCAGAGTCCAGAGATA < 41bp 1 0.326431991784121 1 0.16384094953537 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602076 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_30966 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602076 31602076 1 + C A OV 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCCTAAGGCAGAGTCCAGAGATACAGGCA < 41bp 1 0.431297428685909 1 0.701267123222351 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602076 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_30967 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr15 64429075 64429075 1 + G A OV 64429070 + 64429050 64429090 41 TGTCTCCTAGAAAGAGAAATCCAAGGACTTCAAGAACCACG TGTCTCCTAGAAAGAGAAATCCAAGAACTTCAAGAACCACG < 41bp 1 0.115516452442719 1 0.353373736143112 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64429070 chr15:64429075 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_30969 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:64429029-64429078
64251 chr19 39944005 39944005 1 + G T OV 39944021 + 39944001 39944041 41 CGAAGAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG CGAATAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG < 41bp 1 0.579219037987388 1 0.84163111448288 experiment 0.841561924025224 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944021 chr19:39944005 stopgain 0.945 0 5 hm5C_associated_SNPs_30970 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr19 39944005 39944005 1 + G T OV 39944025 + 39944005 39944045 41 GAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC TAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC < 41bp 1 0.320803606873993 1 0.413842231035233 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944025 chr19:39944005 stopgain 0.945 0 1 hm5C_associated_SNPs_30971 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr6 31595940 31595940 1 + G T OV 31595942 + 31595922 31595962 41 TACTCCTACTCCAGGTGTGGCTGCGGCTCCCACTCTGGTGA TACTCCTACTCCAGGTGTTGCTGCGGCTCCCACTCTGGTGA < 41bp 1 0.593023083565708 1 0.223287135362625 experiment 0.813953832868585 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31595942 chr6:31595940 synonymous SNV . 0 19 hm5C_associated_SNPs_30972 0 0 26 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31595880-31595940
64251 chr16 57685246 57685246 1 + G T OV 57685240 + 57685220 57685260 41 TCGAGAACTCCGAAGAGGCCCTCACAGTCCATGCCCCTTTC TCGAGAACTCCGAAGAGGCCCTCACATTCCATGCCCCTTTC < 41bp 1 0.344945891176713 1 0.048089325428009 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57685240 chr16:57685246 nonsynonymous SNV 0.022 1 27 hm5C_associated_SNPs_30973 0 0 2 PCBP2 POSTAR2 ENCODE chr16:57685238-57685322
64251 chr5 131607826 131607826 1 + G A OV 131607829 + 131607809 131607849 41 TTCTTTCTGGACGAGCGGCTCTACTGTGAGAGCCACGCCAA TTCTTTCTGGACGAGCGACTCTACTGTGAGAGCCACGCCAA < 41bp 1 0.774475773943459 1 0.304970383644104 experiment 0.451048452113082 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607829 chr5:131607826 synonymous SNV . 0 18 hm5C_associated_SNPs_30975 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:131607809-131607834
64251 chr15 91448687 91448687 1 + G A OV 91448697 + 91448677 91448717 41 CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG CCATCTCCCCACAGGACTGCCAGTTTGCTTTGGGGGGCCGG < 41bp 1 0.223518316311541 1 0.116249591112137 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91448697 chr15:91448687 synonymous SNV . 0 11 hm5C_associated_SNPs_30976 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91448672-91448687
64251 chr1 28099860 28099860 1 + C T OV 28099858 + 28099838 28099878 41 ACATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCGG ACATGTACCGGAACCCGGGGCCTTCGGGGCCCCAGCTCCGG < 41bp 1 0.0470299279662676 1 0.129690378904343 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STX12 ENSG00000117758 CDS Human protein_coding chr1:28099858 chr1:28099860 synonymous SNV . 0 23 hm5C_associated_SNPs_30977 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr1 28099860 28099860 1 + C T OV 28099859 + 28099839 28099879 41 CATGTACCGGAACCCGGGGCCCTCGGGGCCCCAGCTCCGGG CATGTACCGGAACCCGGGGCCTTCGGGGCCCCAGCTCCGGG < 41bp 1 0.51206577803584 1 0.379286348819733 experiment 0.975868443928321 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STX12 ENSG00000117758 CDS Human protein_coding chr1:28099859 chr1:28099860 synonymous SNV . 0 22 hm5C_associated_SNPs_30978 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr1 28099860 28099860 1 + C T OV 28099867 + 28099847 28099887 41 GGAACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGC GGAACCCGGGGCCTTCGGGGCCCCAGCTCCGGGACTTCAGC < 41bp 1 0.508617310183105 1 0.468491941690445 experiment 0.982765379633791 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099867 chr1:28099860 synonymous SNV . 0 14 hm5C_associated_SNPs_30979 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr1 28099860 28099860 1 + C T OV 28099868 + 28099848 28099888 41 GAACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCA GAACCCGGGGCCTTCGGGGCCCCAGCTCCGGGACTTCAGCA < 41bp 1 0.405940056080573 1 0.402965068817139 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099868 chr1:28099860 synonymous SNV . 0 13 hm5C_associated_SNPs_30980 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr1 28099860 28099860 1 + C T OV 28099869 + 28099849 28099889 41 AACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCAG AACCCGGGGCCTTCGGGGCCCCAGCTCCGGGACTTCAGCAG < 41bp 1 0.431183075727209 1 0.42561137676239 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099869 chr1:28099860 synonymous SNV . 0 12 hm5C_associated_SNPs_30981 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr1 28099860 28099860 1 + C T OV 28099870 + 28099850 28099890 41 ACCCGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCAGC ACCCGGGGCCTTCGGGGCCCCAGCTCCGGGACTTCAGCAGC < 41bp 1 0.707042474361091 1 0.408547431230545 experiment 0.585915051277818 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STX12 ENSG00000117758 CDS Human protein_coding chr1:28099870 chr1:28099860 synonymous SNV . 0 11 hm5C_associated_SNPs_30982 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:28099840-28099860
64251 chr11 6962816 6962816 1 + G C OV 6962809 + 6962789 6962829 41 TCATCTTCCTCAGATATGCCCTGCAAGGACTCTGCCCTGCA TCATCTTCCTCAGATATGCCCTGCAAGCACTCTGCCCTGCA < 41bp 1 0.701789713427879 1 0.321028470993042 experiment 0.596420573144241 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF215 ENSG00000149054 CDS Human protein_coding chr11:6962809 chr11:6962816 nonsynonymous SNV 0.265 3 28 hm5C_associated_SNPs_30983 0 0 1 UCHL5 POSTAR2 ENCODE chr11:6962798-6962849
64251 chr19 8503305 8503305 1 + G T OV 8503319 + 8503299 8503339 41 TACTCCGAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAA TACTCCTAGTGGAGAAAGACCAACCAGAAAGTTCGCCTGAA < 41bp 1 0.396045918846041 1 0.0734035074710846 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARCH2 ENSG00000099785 CDS Human protein_coding chr19:8503319 chr19:8503305 stopgain 0.966 1 7 hm5C_associated_SNPs_30984 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:8503305-8503306
64251 chr15 93496701 93496701 1 + C T OV 93496712 + 93496692 93496732 41 TCTTATAGTCGTCCCTTTATCCACCCTCACCTCATGGCAGA TCTTATAGTTGTCCCTTTATCCACCCTCACCTCATGGCAGA < 41bp 1 0.210243472656592 1 0.802564144134521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93496712 chr15:93496701 synonymous SNV . 0 10 hm5C_associated_SNPs_30985 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:93496680-93496702
64251 chr1 86048604 86048604 1 + C T OV 86048584 + 86048564 86048604 41 AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAC AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAT < 41bp 1 0.325587989949539 1 0.109192162752151 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048584 chr1:86048604 nonsynonymous SNV 0.998 0 41 hm5C_associated_SNPs_30986 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048604 86048604 1 + C T OV 86048585 + 86048565 86048605 41 GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACA GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGATA < 41bp 1 0.474519162012218 1 0.158911257982254 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048585 chr1:86048604 nonsynonymous SNV 0.998 0 40 hm5C_associated_SNPs_30987 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048604 86048604 1 + C T OV 86048587 + 86048567 86048607 41 ACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACATT ACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGATATT < 41bp 1 0.740238325697244 1 0.0802873075008392 experiment 0.519523348605512 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048587 chr1:86048604 nonsynonymous SNV 0.998 0 38 hm5C_associated_SNPs_30988 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 228879192 228879192 1 + C T OV 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAATGCAGTC < 41bp 1 0.103648702391763 1 0.197666376829147 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879192 nonsynonymous SNV 0.592 4 35 hm5C_associated_SNPs_30989 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:228879180-228879200
64251 chr16 16196532 16196532 1 + A G OV 16196522 + 16196502 16196542 41 GTCCAGGGAAGGAAGCAAAGCAAATGGAGAATGGCATGCTG GTCCAGGGAAGGAAGCAAAGCAAATGGAGAGTGGCATGCTG < 41bp 1 0.329635515727807 1 0.594046771526337 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16196522 chr16:16196532 nonsynonymous SNV 0.970 1 31 hm5C_associated_SNPs_30990 0 0 7 DDX24 POSTAR2 ENCODE chr16:16196519-16196577
64251 chr20 32659994 32659994 1 + G T OV 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCAGATGTTGAGACCATCTTCTCTAAGTATGGCCGTGT < 41bp 1 0.123768277412 1 0.0589331686496735 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32659994 synonymous SNV . 0 12 hm5C_associated_SNPs_30992 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chr4 123160823 123160823 1 + A G OV 123160814 + 123160794 123160834 41 AAGTACTAAGAGTCTTACTGCTGCTTTCTATGGGGACAAGC AAGTACTAAGAGTCTTACTGCTGCTTTCTGTGGGGACAAGC < 41bp 1 0.115881928798878 1 0.0545724034309387 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123160814 chr4:123160823 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_31001 0 0 1 PPIG POSTAR2 ENCODE chr4:123160772-123160851
64251 chr1 28607284 28607284 1 + C G OV 28607298 + 28607278 28607318 41 TACGCCCTCCGTGCCATCACCCGCTACATGACCTGACTCCT TACGCCGTCCGTGCCATCACCCGCTACATGACCTGACTCCT < 41bp 1 0.145680572615296 1 0.421677768230438 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28607298 chr1:28607284 nonsynonymous SNV 0.954 4 7 hm5C_associated_SNPs_31003 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:28607267-28607348
64251 chr19 52714675 52714675 1 + A C OV 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CGCCCCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.435437729826281 1 0.0865324735641479 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714675 nonsynonymous SNV 0.986 2 4 hm5C_associated_SNPs_31005 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr19 52714675 52714675 1 + A C OV 52714695 + 52714675 52714715 41 ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT CCCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT < 41bp 1 0.751142346799425 1 0.87373411655426 experiment 0.497715306401151 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714695 chr19:52714675 nonsynonymous SNV 0.986 2 1 hm5C_associated_SNPs_31006 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr12 132516556 132516556 1 + A C OV 132516568 + 132516548 132516588 41 CTCCACTCACAGCCGTACCACAGGTATAAACCTTGTAGAGG CTCCACTCCCAGCCGTACCACAGGTATAAACCTTGTAGAGG < 41bp 1 0.237023651729572 1 0.263565897941589 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132516568 chr12:132516556 nonsynonymous SNV 0.246 3 9 hm5C_associated_SNPs_31007 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:132516530-132516562
64251 chr11 6631801 6631801 1 + G A OV 6631793 + 6631773 6631813 41 TGAAGACCCTGCAAAGCGACCCAAATTTGACATGATTGTGC TGAAGACCCTGCAAAGCGACCCAAATTTAACATGATTGTGC < 41bp 1 0.202816401951152 1 0.055408239364624 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631793 chr11:6631801 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_31010 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:6631730-6631833
64251 chr17 55194232 55194232 1 + T A OV 55194240 + 55194220 55194260 41 GGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTC GGTCTGACTTTGACACCCTGCCGTTTCAGGGAGCAGAAGTC < 41bp 1 0.0464932011762086 1 0.0786873400211334 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194240 chr17:55194232 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_31011 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194232 55194232 1 + T A OV 55194241 + 55194221 55194261 41 GTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCC GTCTGACTTTGACACCCTGCCGTTTCAGGGAGCAGAAGTCC < 41bp 1 0.0544118827147958 1 0.0560313761234283 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194241 chr17:55194232 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_31012 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr20 37144950 37144950 1 + C A OV 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC GCAAGAATTGAATCAGTATCCCTGCCTTAAAAATCTGCCTC < 41bp 1 0.132272315535863 1 0.242839217185974 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144950 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_31013 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:37144935-37144960
64251 chr11 71946470 71946470 1 + C A OV 71946459 + 71946439 71946479 41 GCTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACC GCTCCATGAAGGTGCGGGTGCCCACGGAGCGACTGGGCACC < 41bp 1 0.115353621916795 1 0.0670367181301117 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946459 chr11:71946470 synonymous SNV . 0 32 hm5C_associated_SNPs_31014 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946470 71946470 1 + C A OV 71946460 + 71946440 71946480 41 CTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCC CTCCATGAAGGTGCGGGTGCCCACGGAGCGACTGGGCACCC < 41bp 1 0.334709694490245 1 0.18289852142334 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946460 chr11:71946470 synonymous SNV . 0 31 hm5C_associated_SNPs_31015 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946470 71946470 1 + C A OV 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCACGGAGCGACTGGGCACCCGTGAGCGGCTCTACGG < 41bp 1 0.392354593323214 1 0.115058988332748 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946470 synonymous SNV . 0 15 hm5C_associated_SNPs_31016 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946470 71946470 1 + C A OV 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCACGGAGCGACTGGGCACCCGTGAGCGGCTCTACGGTG < 41bp 1 0.327343998493085 1 0.101024359464645 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946470 synonymous SNV . 0 13 hm5C_associated_SNPs_31017 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946470 71946470 1 + C A OV 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCACGGAGCGACTGGGCACCCGTGAGCGGCTCTACGGTGG < 41bp 1 0.167745624262474 1 0.464266926050186 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946470 synonymous SNV . 0 12 hm5C_associated_SNPs_31018 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946470 71946470 1 + C A OV 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCACGGAGCGACTGGGCACCCGTGAGCGGCTCTACGGTGGG < 41bp 1 0.751733789099654 1 0.613273322582245 experiment 0.496532421800693 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946470 synonymous SNV . 0 11 hm5C_associated_SNPs_31019 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr7 91708846 91708846 1 + G T OV 91708830 + 91708810 91708850 41 ATAGATCATCTGAGCAAAGACAAACCTGAACTAGAAGTAGT ATAGATCATCTGAGCAAAGACAAACCTGAACTAGAATTAGT < 41bp 1 0.0617401011354364 1 0.12935608625412 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91708830 chr7:91708846 nonsynonymous SNV 0.036 0 37 hm5C_associated_SNPs_31020 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:91708840-91708860
64251 chr6 158735058 158735058 1 + G T OV 158735059 + 158735039 158735079 41 TGAAGAAAGTATGTATGCAGCAGTGGAACATGGGCCTGTGC TGAAGAAAGTATGTATGCATCAGTGGAACATGGGCCTGTGC < 41bp 1 0.237182593676803 1 0.22948095202446 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TULP4 ENSG00000130338 CDS Human protein_coding chr6:158735059 chr6:158735058 nonsynonymous SNV 0.991 1 20 hm5C_associated_SNPs_31021 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:158735058-158735084
64251 chr5 65118661 65118661 1 + G A OV 65118652 + 65118632 65118672 41 AATCCTGAAACCTGGGGGATCTCTGGACGGCATGGACATGC AATCCTGAAACCTGGGGGATCTCTGGACGACATGGACATGC < 41bp 1 0.396480735844019 1 0.238190561532974 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65118652 chr5:65118661 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_31022 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:65118632-65118676
64251 chrX 41000577 41000577 1 + A G OV 41000586 + 41000566 41000606 41 TCAATGGAAAGATGAATGCACTGAATGAAGTTAATAAGGTG TCAATGGAAAGGTGAATGCACTGAATGAAGTTAATAAGGTG < 41bp 1 0.322366559863296 1 0.29094922542572 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41000586 chrX:41000577 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_31023 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41000552-41000579
64251 chrX 70519852 70519852 1 + G T OV 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTTGTGGAACTCCTCCTGCATTCAACCGTGCAGCT < 41bp 1 0.209029641005986 1 0.284958869218826 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519852 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_31024 0 0 48 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:70519820-70519860
64251 chrX 73047108 73047108 1 - C A OV 73047096 - 73047076 73047116 41 GGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGAAC GGCAGAGGTGCTTCCTAACCCCTGCCTGATAGGTGCAGAAC < 41bp 1 0.0939168449624184 1 0.311327397823334 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047096 chrX:73047108 . . 0 9 hm5C_associated_SNPs_31025 0 0 94 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047108 73047108 1 - C A OV 73047098 - 73047078 73047118 41 GTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTGCAGA GTGGCAGAGGTGCTTCCTAACCCCTGCCTGATAGGTGCAGA < 41bp 1 0.173832394535295 1 0.265608906745911 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047098 chrX:73047108 . . 0 11 hm5C_associated_SNPs_31026 0 0 94 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047108 73047108 1 - C A OV 73047102 - 73047082 73047122 41 ATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGTG ATGTGTGGCAGAGGTGCTTCCTAACCCCTGCCTGATAGGTG < 41bp 1 0.0906518638386969 1 0.143833607435226 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047102 chrX:73047108 . . 0 15 hm5C_associated_SNPs_31027 0 0 94 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047108 73047108 1 - C A OV 73047103 - 73047083 73047123 41 CATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATAGGT CATGTGTGGCAGAGGTGCTTCCTAACCCCTGCCTGATAGGT < 41bp 1 0.0496497388124988 1 0.0992226898670197 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047103 chrX:73047108 . . 0 16 hm5C_associated_SNPs_31028 0 0 94 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chrX 73047108 73047108 1 - C A OV 73047106 - 73047086 73047126 41 TGTCATGTGTGGCAGAGGGGCTTCCTAACCCCTGCCTGATA TGTCATGTGTGGCAGAGGTGCTTCCTAACCCCTGCCTGATA < 41bp 1 0.0927945759402637 1 0.133551508188248 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047106 chrX:73047108 . . 0 19 hm5C_associated_SNPs_31029 0 0 94 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr14 74424918 74424918 1 + G A OV 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC CCATTTCCTATGGCCAACTCCAGCCCTTGGGTTCATATTAC < 41bp 1 0.390196988396057 1 0.226500034332275 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424918 nonsynonymous SNV 0.992 1 16 hm5C_associated_SNPs_31030 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:74424902-74424934
64251 chr5 162905760 162905760 1 + G C OV 162905772 + 162905752 162905792 41 AAAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACT AAAAGTATCACAGTATGGTGCAAAGCCTTGAAGATGTTACT < 41bp 1 0.270441635660442 1 0.198527276515961 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HMMR ENSG00000072571 CDS Human protein_coding chr5:162905772 chr5:162905760 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_31031 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:162905740-162905760
64251 chr1 12065962 12065962 1 + C T OV 12065958 + 12065938 12065978 41 TTCCTGGGCCCCAAGAACAGCCGTCGGGCCTTGATGGGCTA TTCCTGGGCCCCAAGAACAGCCGTTGGGCCTTGATGGGCTA < 41bp 1 0.111221946132173 1 0.337304979562759 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12065958 chr1:12065962 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_31032 0 0 1 UCHL5 POSTAR2 ENCODE chr1:12065907-12065970
64251 chr16 30779683 30779683 1 + G A OV 30779681 + 30779661 30779701 41 CAGGGCCCTTCCTCCCGGGGCCGAGAACCTGAGGCCAGGCC CAGGGCCCTTCCTCCCGGGGCCAAGAACCTGAGGCCAGGCC < 41bp 1 0.0898468798803401 1 0.165661543607712 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779681 chr16:30779683 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_31033 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30779646-30779685
64251 chr7 98601890 98601890 1 + G C OV 98601905 + 98601885 98601925 41 TCTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC TCTTGCAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC < 41bp 1 0.128142865709468 1 0.466768711805344 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98601905 chr7:98601890 nonsynonymous SNV 0.966 3 6 hm5C_associated_SNPs_31034 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98601856-98601894
64251 chr19 18967738 18967738 1 + C T OV 18967720 + 18967700 18967740 41 CTGCTGCACATGTGTGGGCGCCGGTGACCCGAGGCTGGCCA CTGCTGCACATGTGTGGGCGCCGGTGACCCGAGGCTGGTCA < 41bp 1 0.193446032511392 1 0.592044115066528 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18967720 chr19:18967738 nonsynonymous SNV 0.887 1 39 hm5C_associated_SNPs_31036 0 0 8 FMR1 POSTAR2 ENCODE chr19:18967709-18967757
64251 chr6 31602070 31602070 1 + G C OV 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCACGCCCTCAG < 41bp 1 0.520613344563752 1 0.321363866329193 experiment 0.958773310872496 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602070 nonsynonymous SNV 0.998 0 33 hm5C_associated_SNPs_31037 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTCTTGGGCTCTAAGCCTGAGGGCCCACGCCCTCAGG < 41bp 1 0.507938993300459 1 0.805681943893433 experiment 0.984122013399083 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602070 nonsynonymous SNV 0.998 0 32 hm5C_associated_SNPs_31038 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602066 + 31602046 31602086 41 TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTC TTGGGCTCTAAGCCTGAGGGCCCACGCCCTCAGGCAGAGTC < 41bp 1 0.145800680553635 1 0.137005776166916 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602066 chr6:31602070 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_31039 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCACGCCCTCAGGCAGAGTCCAGAGA < 41bp 1 0.184588214830413 1 0.0714057683944702 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602070 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_31040 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCACGCCCTCAGGCAGAGTCCAGAGAT < 41bp 1 0.309851885167908 1 0.159002035856247 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602070 nonsynonymous SNV 0.998 0 18 hm5C_associated_SNPs_31041 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCACGCCCTCAGGCAGAGTCCAGAGATA < 41bp 1 0.384163225086912 1 0.350755035877228 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602070 nonsynonymous SNV 0.998 0 17 hm5C_associated_SNPs_31042 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCACGCCCTCAGGCAGAGTCCAGAGATACA < 41bp 1 0.441166109450076 1 0.840992271900177 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602070 nonsynonymous SNV 0.998 0 15 hm5C_associated_SNPs_31043 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602070 31602070 1 + G C OV 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCACGCCCTCAGGCAGAGTCCAGAGATACAGGCA < 41bp 1 0.400568301577624 1 0.662542223930359 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602070 nonsynonymous SNV 0.998 0 11 hm5C_associated_SNPs_31044 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 80409218 80409218 1 + G A OV 80409221 + 80409201 80409241 41 TTTTTTTTTTATAGGCAGAACCTTAGAGAAGAAGAGTGGAA TTTTTTTTTTATAGGCAAAACCTTAGAGAAGAAGAGTGGAA < 41bp 1 0.0735567041202812 1 0.150394916534424 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SH3BGRL2 ENSG00000198478 CDS Human protein_coding chr6:80409221 chr6:80409218 nonsynonymous SNV 0.956 0 18 hm5C_associated_SNPs_31046 0 0 1 UPF1 POSTAR2 ENCODE chr6:80409214-80409222
64251 chr2 157407246 157407246 1 + C A OV 157407233 + 157407213 157407253 41 GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCCTGGTTAT GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCATGGTTAT < 41bp 1 0.135217574170557 1 0.280665516853333 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407233 chr2:157407246 nonsynonymous SNV 0.991 5 34 hm5C_associated_SNPs_31049 0 0 1 PRPF8 POSTAR2 ENCODE chr2:157407242-157407319
64251 chr17 36873089 36873089 1 + G T OV 36873079 + 36873059 36873099 41 CCCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCT CCCAGCTGCCCCATCCTTGCCCAGTGCCCATCTGGCTGGCT < 41bp 1 0.188085199310467 1 0.11389896273613 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873079 chr17:36873089 nonsynonymous SNV 0.988 2 31 hm5C_associated_SNPs_31050 0 0 3 GRWD1 POSTAR2 ENCODE chr17:36873084-36873116
64251 chr17 36873089 36873089 1 + G T OV 36873080 + 36873060 36873100 41 CCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTT CCAGCTGCCCCATCCTTGCCCAGTGCCCATCTGGCTGGCTT < 41bp 1 0.308413415251659 1 0.092524915933609 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873080 chr17:36873089 nonsynonymous SNV 0.988 2 30 hm5C_associated_SNPs_31051 0 0 3 GRWD1 POSTAR2 ENCODE chr17:36873084-36873116
64251 chr17 36873089 36873089 1 + G T OV 36873085 + 36873065 36873105 41 TGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCG TGCCCCATCCTTGCCCAGTGCCCATCTGGCTGGCTTTACCG < 41bp 1 0.0534218330080307 1 0.0430538654327393 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873085 chr17:36873089 nonsynonymous SNV 0.988 2 25 hm5C_associated_SNPs_31052 0 0 3 GRWD1 POSTAR2 ENCODE chr17:36873084-36873116
64251 chr17 36873089 36873089 1 + G T OV 36873086 + 36873066 36873106 41 GCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGC GCCCCATCCTTGCCCAGTGCCCATCTGGCTGGCTTTACCGC < 41bp 1 0.0259531695671031 1 0.0349054634571075 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873086 chr17:36873089 nonsynonymous SNV 0.988 2 24 hm5C_associated_SNPs_31053 0 0 3 GRWD1 POSTAR2 ENCODE chr17:36873084-36873116
64251 chr17 36873089 36873089 1 + G T OV 36873087 + 36873067 36873107 41 CCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCC CCCCATCCTTGCCCAGTGCCCATCTGGCTGGCTTTACCGCC < 41bp 1 0.133859706486381 1 0.0571086406707764 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873087 chr17:36873089 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_31054 0 0 3 GRWD1 POSTAR2 ENCODE chr17:36873084-36873116
64251 chr19 50548294 50548294 1 + G C OV 50548302 + 50548282 50548322 41 CGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAAC CGACCACAGCCACCAGGATTCTGTTCAGGAAGGGGAGAAAC < 41bp 1 0.273592371981369 1 0.0583143830299377 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548302 chr19:50548294 nonsynonymous SNV 0.059 1 13 hm5C_associated_SNPs_31055 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:50548280-50548300
64251 chr10 70737292 70737292 1 + G A OV 70737312 + 70737292 70737332 41 GATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATC AATTCCGTGCCTCCCACTGCCATTAGTCACTTCAAACAATC < 41bp 1 0.362579707105731 1 0.017286479473114 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70737312 chr10:70737292 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_31056 0 0 21 RBM10 POSTAR2 GSE44976,GSM1095143 chr10:70737274-70737295
64251 chr7 40102476 40102476 1 + G T OV 40102465 + 40102445 40102485 41 TAATTACTTTATGGTACCGTCCACCTGAACTGCTACTGGGA TAATTACTTTATGGTACCGTCCACCTGAACTTCTACTGGGA < 41bp 1 0.0482956426452935 1 0.139220505952835 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102465 chr7:40102476 synonymous SNV . 0 32 hm5C_associated_SNPs_31057 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:40102446-40102506
64251 chr2 27456286 27456286 1 + G A OV 27456273 + 27456253 27456293 41 ACATGGCCATGGCGTTGCATCGGCAGCAGTGCCGGGTGCTG ACATGGCCATGGCGTTGCATCGGCAGCAGTGCCAGGTGCTG < 41bp 1 0.743078259282376 1 0.782354831695557 experiment 0.513843481435248 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456273 chr2:27456286 nonsynonymous SNV 0.996 4 34 hm5C_associated_SNPs_31058 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27456275-27456306
64251 chr2 27456286 27456286 1 + G A OV 27456304 + 27456284 27456324 41 CCGGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGGCTG CCAGGTGCTGGGCACCTCCCCTGAAGCCATTGACTCGGCTG < 41bp 1 0.678121689400875 1 0.433006286621094 experiment 0.643756621198251 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27456304 chr2:27456286 nonsynonymous SNV 0.996 4 3 hm5C_associated_SNPs_31059 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27456275-27456306
64251 chr5 176524646 176524646 1 + C G OV 176524627 + 176524607 176524647 41 CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTGC < 41bp 1 0.318469029147095 1 0.0316917598247528 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524627 chr5:176524646 nonsynonymous SNV 0.153 0 40 hm5C_associated_SNPs_31060 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr20 62366049 62366049 1 + T C OV 62366054 + 62366034 62366074 41 TGCCCTCTGTCCGTCTCTTGCAGTGGTGGGGTCAGATGCTG TGCCCTCTGTCCGTCCCTTGCAGTGGTGGGGTCAGATGCTG < 41bp 1 0.441134751060493 1 0.247981309890747 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZGPAT ENSG00000197114 CDS Human protein_coding chr20:62366054 chr20:62366049 synonymous SNV . 0 16 hm5C_associated_SNPs_31063 0 0 4 BUD13 POSTAR2 ENCODE chr20:62366043-62366127
64251 chr19 47423186 47423186 1 + C T OV 47423199 + 47423179 47423219 41 ACGAGGCCCACTTAGAGAAGCTGAGGAACGAAAGGAAAAGA ACGAGGCTCACTTAGAGAAGCTGAGGAACGAAAGGAAAAGA < 41bp 1 0.37180319576339 1 0.413810849189758 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423199 chr19:47423186 synonymous SNV . 0 8 hm5C_associated_SNPs_31064 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:47423150-47423190
64251 chr19 41078000 41078000 1 + C T OV 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GGACTCCAAGGGCCCGGCATCTGGGAGCACACACGGTGGGG < 41bp 1 0.633038539099258 1 0.874019503593445 experiment 0.733922921801484 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41078000 synonymous SNV . 0 22 hm5C_associated_SNPs_31065 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr10 75867093 75867093 1 + C G OV 75867081 + 75867061 75867101 41 ACCTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTG ACCTCAGGAGCCTGACTTCCCGCCGCCTCCACGAGACCTTG < 41bp 1 0.662282909626358 1 0.199391514062881 experiment 0.675434180747283 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867081 chr10:75867093 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_31066 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75867074-75867093
64251 chr12 58111998 58111998 1 + A T OV 58112014 + 58111994 58112034 41 AGAGAAGGAAAGGGGTGATCCAGAACGGCAGAGAGAGATGG AGAGTAGGAAAGGGGTGATCCAGAACGGCAGAGAGAGATGG < 41bp 1 0.774975697292903 1 0.613829135894775 experiment 0.450048605414193 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout OS9 ENSG00000135506 CDS Human protein_coding chr12:58112014 chr12:58111998 stopgain 0.118 0 5 hm5C_associated_SNPs_31067 0 0 5 RPS3 POSTAR2 ENCODE chr12:58111957-58112022
64251 chr19 16314404 16314404 1 + G A OV 16314393 + 16314373 16314413 41 TCCTGGCCCACGGGGGGGTCCGTTTCATGTGGATCAAACAC TCCTGGCCCACGGGGGGGTCCGTTTCATGTGAATCAAACAC < 41bp 1 0.0923151059941879 1 0.182765632867813 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16314393 chr19:16314404 stopgain 1.000 1 32 hm5C_associated_SNPs_31068 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:16314380-16314407
64251 chrX 70775817 70775817 1 + A C OV 70775814 + 70775794 70775834 41 TGTTTTCTAGGTTGCTGAAGCAGAAGATTGTTATAATACAG TGTTTTCTAGGTTGCTGAAGCAGCAGATTGTTATAATACAG < 41bp 1 0.71120833132041 1 0.453077971935272 experiment 0.57758333735918 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70775814 chrX:70775817 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_31069 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70775790-70775829
64251 chrX 70775816 70775816 1 + G T OV 70775814 + 70775794 70775834 41 TGTTTTCTAGGTTGCTGAAGCAGAAGATTGTTATAATACAG TGTTTTCTAGGTTGCTGAAGCATAAGATTGTTATAATACAG < 41bp 1 0.326255853378623 1 0.380445420742035 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70775814 chrX:70775816 stopgain 1.000 1 23 hm5C_associated_SNPs_31070 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:70775790-70775816
64251 chr16 29821441 29821441 1 + G A PAAD 29821428 + 29821408 29821448 41 GGTTTGTCCAATGGCGGCGGCAGCGGCAGCGGCGGCAGCGG GGTTTGTCCAATGGCGGCGGCAGCGGCAGCGGCAGCAGCGG < 41bp 1 0.759650267745185 1 0.403252601623535 experiment 0.48069946450963 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29821428 chr16:29821441 nonsynonymous SNV 0.000 1 34 hm5C_associated_SNPs_31072 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:29821398-29821448
64251 chr2 242695366 242695366 1 + G A PAAD 242695362 + 242695342 242695382 41 CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC CCTGTGGAGCGGCTCTACGACATCATGACTGACCTGCGCGC < 41bp 1 0.692307622234091 1 0.306806743144989 experiment 0.615384755531817 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695362 chr2:242695366 nonsynonymous SNV 0.020 5 25 hm5C_associated_SNPs_31073 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:242695362-242695401
64251 chr1 201966564 201966564 1 + C T PAAD 201966545 + 201966525 201966565 41 CCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATCATCC CCTGCTAGCTGGGGACCGCTCCTTGGCAGATGTCATCATTC < 41bp 1 0.194398840673504 1 0.11378288269043 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966545 chr1:201966564 synonymous SNV . 0 40 hm5C_associated_SNPs_31074 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:201966556-201966584
64251 chr20 60701454 60701454 1 + G A PAAD 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTACGGCCCGCTGGCGGCCAACTCCCTGCTCAGCC < 41bp 1 0.681520705770127 1 0.800320386886597 experiment 0.636958588459747 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701454 nonsynonymous SNV 0.999 1 27 hm5C_associated_SNPs_31077 0 0 2 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr19 3574395 3574395 1 + C T PAAD 3574378 + 3574358 3574398 41 AACGACGCAGCCCGGTTCTGCAGCCGGTGAAGAAACGCGGC AACGACGCAGCCCGGTTCTGCAGCCGGTGAAGAAACGTGGC < 41bp 1 0.515237474299193 1 0.553352773189545 experiment 0.969525051401614 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMG20B ENSG00000064961 CDS Human protein_coding chr19:3574378 chr19:3574395 nonsynonymous SNV 0.990 1 38 hm5C_associated_SNPs_31078 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:3574389-3574413
64251 chr18 48604703 48604703 1 + T G PAAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCGGGGGACCGGATTACCCAAGACAGAGCA < 41bp 1 0.515730676463909 1 0.71130633354187 experiment 0.968538647072182 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604703 nonsynonymous SNV 1.000 5 14 hm5C_associated_SNPs_31081 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:48604684-48604713
64251 chr17 7750213 7750213 1 + C T PAAD 7750209 + 7750189 7750229 41 CACCACCACCACCACCACCACCACCACCCCTGCCTGGCCTG CACCACCACCACCACCACCACCACTACCCCTGCCTGGCCTG < 41bp 1 0.0480859035036001 1 0.196627974510193 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7750209 chr17:7750213 nonsynonymous SNV 0.923 2 25 hm5C_associated_SNPs_31083 0 0 1 SF3B1 POSTAR2 ENCODE chr17:7750190-7750231
64251 chr1 11897102 11897102 1 + A G PAAD 11897086 + 11897066 11897106 41 TCCTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCAGTCC TCCTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCGGTCC < 41bp 1 0.744569689282414 1 0.867687821388245 experiment 0.510860621435172 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897086 chr1:11897102 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_31102 0 0 3 BUD13 POSTAR2 ENCODE chr1:11897052-11897114
64251 chr3 186302256 186302256 1 + C T PAAD 186302261 + 186302241 186302281 41 TCACCAGGCCAGGAGCGAAGCTATGGAAGAAAGGGGAAGGG TCACCAGGCCAGGAGTGAAGCTATGGAAGAAAGGGGAAGGG < 41bp 1 0.466421611284846 1 0.192480564117432 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302261 chr3:186302256 nonsynonymous SNV 0.995 1 16 hm5C_associated_SNPs_31103 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186302222-186302257
64251 chr19 48254262 48254262 1 + C T PAAD 48254264 + 48254244 48254284 41 GAGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCT GAGCTGCCCCGGGAGGTGTGCAGGGCCCAGGCCCGGCTCCT < 41bp 1 0.77476321289754 1 0.952251315116882 experiment 0.45047357420492 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254264 chr19:48254262 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_31104 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr19 48254262 48254262 1 + C T PAAD 48254270 + 48254250 48254290 41 CCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCC CCCCGGGAGGTGTGCAGGGCCCAGGCCCGGCTCCTCAACCC < 41bp 1 0.572226022090048 1 0.466518968343735 experiment 0.855547955819903 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254270 chr19:48254262 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_31105 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr19 48254262 48254262 1 + C T PAAD 48254275 + 48254255 48254295 41 GGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTG GGAGGTGTGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTG < 41bp 1 0.677348569229529 1 0.654629588127136 experiment 0.645302861540943 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254275 chr19:48254262 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_31106 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr19 48254262 48254262 1 + C T PAAD 48254276 + 48254256 48254296 41 GAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGC GAGGTGTGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGC < 41bp 1 0.25970421394035 1 0.475737065076828 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254276 chr19:48254262 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_31107 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr19 48254262 48254262 1 + C T PAAD 48254277 + 48254257 48254297 41 AGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCA AGGTGTGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCA < 41bp 1 0.386445674498717 1 0.243677914142609 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254277 chr19:48254262 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_31108 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr19 48254262 48254262 1 + C T PAAD 48254280 + 48254260 48254300 41 TGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCAACA TGTGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCAACA < 41bp 1 0.440343207228198 1 0.421690046787262 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254280 chr19:48254262 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_31109 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48254261-48254262
64251 chr1 979372 979372 1 + C T PAAD 979380 + 979360 979400 41 GCAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGC GCAGACACAGATTGAGGAGGCCCGGGCAGGGCCGTGCGAGC < 41bp 1 0.423301107358244 1 0.54153972864151 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979380 chr1:979372 synonymous SNV . 0 13 hm5C_associated_SNPs_31111 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979372 979372 1 + C T PAAD 979381 + 979361 979401 41 CAGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCA CAGACACAGATTGAGGAGGCCCGGGCAGGGCCGTGCGAGCA < 41bp 1 0.378153892920758 1 0.366935878992081 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979381 chr1:979372 synonymous SNV . 0 12 hm5C_associated_SNPs_31112 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979372 979372 1 + C T PAAD 979382 + 979362 979402 41 AGACACAGATCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAG AGACACAGATTGAGGAGGCCCGGGCAGGGCCGTGCGAGCAG < 41bp 1 0.652156087288957 1 0.74472051858902 experiment 0.695687825422086 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979382 chr1:979372 synonymous SNV . 0 11 hm5C_associated_SNPs_31113 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979372 979372 1 + C T PAAD 979391 + 979371 979411 41 TCGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG TTGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCG < 41bp 1 0.272338388147834 1 0.337813377380371 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979391 chr1:979372 synonymous SNV . 0 2 hm5C_associated_SNPs_31114 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr1 979372 979372 1 + C T PAAD 979392 + 979372 979412 41 CGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG TGAGGAGGCCCGGGCAGGGCCGTGCGAGCAGGGTAGGCCGG < 41bp 1 0.317953768210979 1 0.511698365211487 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:979392 chr1:979372 synonymous SNV . 0 1 hm5C_associated_SNPs_31115 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:979360-979380
64251 chr7 128407587 128407587 1 + C T PAAD 128407572 + 128407552 128407592 41 GGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTTCGGGAT GGGTAAAGACAGAGCGAGAGCAGTTTGTTGAGTTTTGGGAT < 41bp 1 0.42436168161938 1 0.118016600608826 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407572 chr7:128407587 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_31116 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr7 128407587 128407587 1 + C T PAAD 128407598 + 128407578 128407618 41 GTTGAGTTTCGGGATAAGAACCGTGATGGGAAGATGGACAA GTTGAGTTTTGGGATAAGAACCGTGATGGGAAGATGGACAA < 41bp 1 0.509703629758366 1 0.125372111797333 experiment 0.980592740483269 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALU ENSG00000128595 CDS Human protein_coding chr7:128407598 chr7:128407587 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_31117 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:128407514-128407608
64251 chr2 113315647 113315647 1 + G A PAAD 113315643 + 113315623 113315663 41 ACCTTTTTGCTACTGGGAATCTGCGTTCTAAAACAGGTAAA ACCTTTTTGCTACTGGGAATCTGCATTCTAAAACAGGTAAA < 41bp 1 0.68804439639677 1 0.900206029415131 experiment 0.623911207206459 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113315643 chr2:113315647 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_31118 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr2:113315619-113315650
64251 chr11 86518792 86518792 1 + G A PAAD 86518805 + 86518785 86518825 41 GCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAA GCATACCACCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAA < 41bp 1 0.235491246790451 1 0.195033073425293 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518805 chr11:86518792 nonsynonymous SNV 0.991 1 8 hm5C_associated_SNPs_31119 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:86518761-86518807
64251 chr19 10402269 10402269 1 + C T PAAD 10402280 + 10402260 10402300 41 CGTGCGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGA CGTGCGAGCTTCACGCTGACCCTGCTGCGGGGCGCCCAGGA < 41bp 1 0.19716536966456 1 0.289967954158783 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10402280 chr19:10402269 nonsynonymous SNV 0.356 4 10 hm5C_associated_SNPs_31120 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:10402238-10402299
64251 chr19 10402269 10402269 1 + C T PAAD 10402281 + 10402261 10402301 41 GTGCGAGCCTCACGCTGACCCTGCTGCGGGGCGCCCAGGAG GTGCGAGCTTCACGCTGACCCTGCTGCGGGGCGCCCAGGAG < 41bp 1 0.661311456461445 1 0.683787822723389 experiment 0.67737708707711 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ICAM5 ENSG00000105376 CDS Human protein_coding chr19:10402281 chr19:10402269 nonsynonymous SNV 0.356 4 9 hm5C_associated_SNPs_31121 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:10402238-10402299
64251 chr6 168363200 168363200 1 + C T PAAD 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAGGCAAGAGGAAGAGTGCCGGCGGCAGGAGGAGGAGCG < 41bp 1 0.260926837542592 1 0.45601612329483 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363200 nonsynonymous SNV 0.005 3 19 hm5C_associated_SNPs_31122 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221666 chr6:168363180-168363200
64251 chr3 126741028 126741028 1 + G A PAAD 126741032 + 126741012 126741052 41 CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCGCGGGAA CTGGAGGCACAGCGCAACTTCTCCATGCGCGACCGCGGGAA < 41bp 1 0.720692599620368 1 0.980920910835266 experiment 0.558614800759264 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126741032 chr3:126741028 nonsynonymous SNV 0.990 1 17 hm5C_associated_SNPs_31123 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:126741015-126741050
64251 chr16 697444 697444 1 + T G PAAD 697463 + 697443 697483 41 GTGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC GGGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC < 41bp 1 0.124961766384601 1 0.059614360332489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697463 chr16:697444 synonymous SNV . 0 2 hm5C_associated_SNPs_31124 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:697440-697460
64251 chr17 40695695 40695695 1 + C A PAAD 40695685 + 40695665 40695705 41 TCCCTCCCTGGCCACCAGCCCCGCCTTCCGCTACGACCTGC TCCCTCCCTGGCCACCAGCCCCGCCTTCCGATACGACCTGC < 41bp 1 0.260622799999297 1 0.0793246030807495 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695685 chr17:40695695 synonymous SNV . 0 31 hm5C_associated_SNPs_31126 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:40695694-40695695
64251 chr17 40695695 40695695 1 + C A PAAD 40695702 + 40695682 40695722 41 GCCCCGCCTTCCGCTACGACCTGCTGGACCTCACTCGGCAG GCCCCGCCTTCCGATACGACCTGCTGGACCTCACTCGGCAG < 41bp 1 0.453837443208948 1 0.162435799837112 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695702 chr17:40695695 synonymous SNV . 0 14 hm5C_associated_SNPs_31127 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:40695694-40695695
64251 chr16 70589068 70589068 1 + G A PAAD 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC AGCGACAAGTGGTGATTACCCTGACAGGAGGAGAGCTGGTC < 41bp 1 0.412032776882949 1 0.157458662986755 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589068 nonsynonymous SNV 0.999 1 18 hm5C_associated_SNPs_31128 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589068 70589068 1 + G A PAAD 70589075 + 70589055 70589095 41 ACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTCTATT ACAAGTGGTGATTACCCTGACAGGAGGAGAGCTGGTCTATT < 41bp 1 0.771439703802961 1 0.482334911823273 experiment 0.457120592394079 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589075 chr16:70589068 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_31129 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589068 70589068 1 + G A PAAD 70589086 + 70589066 70589106 41 TTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT TTACCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT < 41bp 1 0.215759990032742 1 0.159055382013321 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589086 chr16:70589068 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_31130 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr3 47041693 47041693 1 + C T PAAD 47041673 + 47041653 47041693 41 CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGGATCAGGC CCTTTGACCTGGGCCTGGAACGGTCTAGTGTAGGATCAGGT < 41bp 1 0.0918587931448748 1 0.611271500587463 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041673 chr3:47041693 synonymous SNV . 0 41 hm5C_associated_SNPs_31131 0 0 2 EIF3H POSTAR2 ENCODE chr3:47041678-47041705
64251 chr16 449418 449418 1 + C T PAAD 449415 + 449395 449435 41 TTGCCGAGCACTACCAGGACCTGCGGAGGAAGCCCTTCTAC TTGCCGAGCACTACCAGGACCTGTGGAGGAAGCCCTTCTAC < 41bp 1 0.536916388501197 1 0.364969730377197 experiment 0.926167222997606 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NME4 ENSG00000103202 CDS Human protein_coding chr16:449415 chr16:449418 nonsynonymous SNV 0.103 2 24 hm5C_associated_SNPs_31132 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:449380-449420
64251 chr16 14403174 14403174 1 + G A PAAD 14403172 + 14403152 14403192 41 AAATGAGGGACTTTTGGGGGCAGATGTGTTTCCATTCCACT AAATGAGGGACTTTTGGGGGCAAATGTGTTTCCATTCCACT < 41bp 1 0.245897285545366 1 0.346992760896683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR365A ENSG00000199130 ncRNA_exonic Human miRNA chr16:14403172 chr16:14403174 . . 0 23 hm5C_associated_SNPs_31133 0 0 4 QKI POSTAR2 GSE21578,GSM545211 chr16:14403156-14403179
64251 chr7 44747483 44747483 1 + C A PAAD 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGACGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA < 41bp 1 0.785509715928632 1 0.846036672592163 experiment 0.428980568142735 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747483 nonsynonymous SNV 0.992 2 6 hm5C_associated_SNPs_31134 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr17 34147406 34147406 1 + C T PAAD 34147392 + 34147372 34147412 41 AGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGA AGCAGAGCTCATATAGCCAGCAACCATATAATAATCAGGGA < 41bp 1 0.189593889859093 1 0.378010183572769 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF15 ENSG00000172660 CDS Human other chr17:34147392 chr17:34147406 nonsynonymous SNV . 0 35 hm5C_associated_SNPs_31137 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:34147340-34147420
64251 chr6 7578046 7578046 1 + G T PAAD 7578027 + 7578007 7578047 41 TGCAGGATTATGAGCTCCAGCTGGCCTCATACACCTCAGGA TGCAGGATTATGAGCTCCAGCTGGCCTCATACACCTCAGTA < 41bp 1 0.268185467475351 1 0.326664119958878 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DSP ENSG00000096696 CDS Human protein_coding chr6:7578027 chr6:7578046 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_31139 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr6:7578012-7578062
64251 chr17 78335544 78335544 1 + G T PAAD 78335559 + 78335539 78335579 41 CCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG CCCAATAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG < 41bp 1 0.0289496427549055 1 0.061883419752121 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78335559 chr17:78335544 nonsynonymous SNV 0.002 1 6 hm5C_associated_SNPs_31140 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:78335540-78335560
64251 chr16 89971399 89971399 1 + T C PAAD 89971393 + 89971373 89971413 41 GAACCTGTACCTTGGGAGGTCACACTTTCTCTGGAAAGAGC GAACCTGTACCTTGGGAGGTCACACTCTCTCTGGAAAGAGC < 41bp 1 0.189208903881589 1 0.154132038354874 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89971393 chr16:89971399 nonsynonymous SNV 0.927 0 27 hm5C_associated_SNPs_31141 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89971365-89971403
64251 chr10 114918429 114918429 1 + A G PAAD 114918428 + 114918408 114918448 41 TTTGTTCTTTTTTTTCAGAACACAGCGAATGTTTCCTAAAT TTTGTTCTTTTTTTTCAGAACGCAGCGAATGTTTCCTAAAT < 41bp 1 0.328321752621418 1 0.380167990922928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114918428 chr10:114918429 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_31142 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr10:114918409-114918430
64251 chr16 70589061 70589061 1 + G A PAAD 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC AGCGACAAGTAGTGATTGCCCTGACAGGAGGAGAGCTGGTC < 41bp 1 0.28463500693014 1 0.114905893802643 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589061 synonymous SNV . 0 11 hm5C_associated_SNPs_31143 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr7 36464161 36464161 1 + G A PAAD 36464155 + 36464135 36464175 41 TAATGCTTTATTTTTCCAGGCAAGATGTATCCAATGACTTT TAATGCTTTATTTTTCCAGGCAAGATATATCCAATGACTTT < 41bp 1 0.370863307335349 1 0.190171837806702 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36464155 chr7:36464161 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_31144 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:36464150-36464175
64251 chr3 128998687 128998687 1 + T C PAAD 128998697 + 128998677 128998717 41 CCCTGATAAGTACTGCCCCTCTTACAACAAGAGTCCTCAAT CCCTGATAAGCACTGCCCCTCTTACAACAAGAGTCCTCAAT < 41bp 1 0.0794513518111383 1 0.0357137322425842 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMCES ENSG00000183624 CDS Human protein_coding chr3:128998697 chr3:128998687 nonsynonymous SNV 0.777 4 11 hm5C_associated_SNPs_31145 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr3:128998686-128998687
64251 chr11 130011402 130011402 1 + G A PAAD 130011408 + 130011388 130011428 41 TTCAGGTCATTGACGAGACTCTGGATGTTAAGGAAATGATT TTCAGGTCATTGACAAGACTCTGGATGTTAAGGAAATGATT < 41bp 1 0.783903264539677 1 0.57425594329834 experiment 0.432193470920647 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130011408 chr11:130011402 nonsynonymous SNV 0.979 4 15 hm5C_associated_SNPs_31146 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:130011389-130011431
64251 chr16 3076711 3076711 1 + A G PAAD 3076699 + 3076679 3076719 41 GAGGGTCCTCCGGGGCCACACAGACTACATCCACTGCCTGG GAGGGTCCTCCGGGGCCACACAGACTACATCCGCTGCCTGG < 41bp 1 0.586545913601778 1 0.586885452270508 experiment 0.826908172796443 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control THOC6 ENSG00000131652 CDS Human protein_coding chr16:3076699 chr16:3076711 nonsynonymous SNV 0.999 3 33 hm5C_associated_SNPs_31147 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3076695-3076722
64251 chr9 91083296 91083296 1 + G A PAAD 91083287 + 91083267 91083307 41 TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGATG TTTTTTTTTTTAATCCCCAGCGACATCTCAAATCAGCGATG < 41bp 1 0.349672445573045 1 0.543424606323242 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083287 chr9:91083296 nonsynonymous SNV 0.620 1 30 hm5C_associated_SNPs_31148 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr9:91083277-91083298
64251 chr17 48185696 48185696 1 + C T PAAD 48185699 + 48185679 48185719 41 GCAGAATGCCATGAGGGCGACTGTGGAAAGCCATGAGTCCA GCAGAATGCCATGAGGGTGACTGTGGAAAGCCATGAGTCCA < 41bp 1 0.520170147500245 1 0.122014045715332 experiment 0.959659704999509 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK2 ENSG00000005882 CDS Human protein_coding chr17:48185699 chr17:48185696 nonsynonymous SNV 0.987 4 18 hm5C_associated_SNPs_31149 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48185686-48185708
64251 chr1 233514930 233514930 1 + C T PAAD 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGTACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.274932549146924 1 0.0459144711494446 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514930 synonymous SNV . 0 7 hm5C_associated_SNPs_31152 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr3 39126162 39126162 1 + T G PAAD 39126143 + 39126123 39126163 41 TTTCTTTTGATAGATGTTAACTATTACTTTGGATGAAAGTG TTTCTTTTGATAGATGTTAACTATTACTTTGGATGAAAGGG < 41bp 1 0.101287410872855 1 0.139548510313034 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR48 ENSG00000114742 CDS Human protein_coding chr3:39126143 chr3:39126162 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_31155 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:39126154-39126184
64251 chr3 196304505 196304505 1 + C T PAAD 196304496 + 196304476 196304516 41 GGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGA GGAAGTGTGGTGGGAGGGCCCTCTGGGCATTGTGGCAGTGA < 41bp 1 0.674452144343958 1 0.26748514175415 experiment 0.651095711312085 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196304496 chr3:196304505 nonsynonymous SNV 0.999 4 30 hm5C_associated_SNPs_31156 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:196304489-196304513
64251 chr4 166254711 166254711 1 + C A PAAD 166254694 + 166254674 166254714 41 CATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTA CATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTATTA < 41bp 1 0.601646641427313 1 0.0392080247402191 experiment 0.796706717145373 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166254694 chr4:166254711 nonsynonymous SNV 0.992 1 38 hm5C_associated_SNPs_31157 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr4:166254691-166254756
64251 chr6 33169572 33169572 1 + C T PAAD 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTTTGTCCTCTTTCTTATCCCCGTGGA < 41bp 1 0.17381318105984 1 0.0299323797225952 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169572 synonymous SNV . 0 27 hm5C_associated_SNPs_31158 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr10 17277377 17277377 1 + C A PAAD 17277369 + 17277349 17277389 41 TTGCCACCTACAGGAAGCTGCTGGAAGGCGAGGAGAGCAGG TTGCCACCTACAGGAAGCTGCTGGAAGGAGAGGAGAGCAGG < 41bp 1 0.694288477407889 1 0.553130865097046 experiment 0.611423045184221 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277369 chr10:17277377 synonymous SNV . 0 29 hm5C_associated_SNPs_31159 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr10 17277377 17277377 1 + C A PAAD 17277386 + 17277366 17277406 41 CTGCTGGAAGGCGAGGAGAGCAGGTAGGGAACTCAGACTTG CTGCTGGAAGGAGAGGAGAGCAGGTAGGGAACTCAGACTTG < 41bp 1 0.620624362997298 1 0.47293284535408 experiment 0.758751274005403 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277386 chr10:17277377 synonymous SNV . 0 12 hm5C_associated_SNPs_31160 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr12 132334409 132334409 1 + G A PAAD 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCAACTTC < 41bp 1 0.23353055060284 1 0.0622804760932922 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334409 nonsynonymous SNV 0.972 2 36 hm5C_associated_SNPs_31162 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr9 135942552 135942552 1 + C T PAAD 135942539 + 135942519 135942559 41 GGCCCAGTGTCTGAAGGTTACTGATCCCCGAGCCCTGACGC GGCCCAGTGTCTGAAGGTTACTGATCCCCGAGCTCTGACGC < 41bp 1 0.583598649038857 1 0.0287289619445801 experiment 0.832802701922285 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942539 chr9:135942552 synonymous SNV . 0 34 hm5C_associated_SNPs_31164 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr9 135942552 135942552 1 + C T PAAD 135942544 + 135942524 135942564 41 AGTGTCTGAAGGTTACTGATCCCCGAGCCCTGACGCTGGCC AGTGTCTGAAGGTTACTGATCCCCGAGCTCTGACGCTGGCC < 41bp 1 0.37273259795368 1 0.0644303858280182 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942544 chr9:135942552 synonymous SNV . 0 29 hm5C_associated_SNPs_31165 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr9 135942552 135942552 1 + C T PAAD 135942545 + 135942525 135942565 41 GTGTCTGAAGGTTACTGATCCCCGAGCCCTGACGCTGGCCT GTGTCTGAAGGTTACTGATCCCCGAGCTCTGACGCTGGCCT < 41bp 1 0.670988031755233 1 0.0818633437156677 experiment 0.658023936489534 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942545 chr9:135942552 synonymous SNV . 0 28 hm5C_associated_SNPs_31166 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr9 135942552 135942552 1 + C T PAAD 135942546 + 135942526 135942566 41 TGTCTGAAGGTTACTGATCCCCGAGCCCTGACGCTGGCCTA TGTCTGAAGGTTACTGATCCCCGAGCTCTGACGCTGGCCTA < 41bp 1 0.64435846875214 1 0.493568241596222 experiment 0.711283062495721 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942546 chr9:135942552 synonymous SNV . 0 27 hm5C_associated_SNPs_31167 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr9 135942552 135942552 1 + C T PAAD 135942547 + 135942527 135942567 41 GTCTGAAGGTTACTGATCCCCGAGCCCTGACGCTGGCCTAT GTCTGAAGGTTACTGATCCCCGAGCTCTGACGCTGGCCTAT < 41bp 1 0.701570489831429 1 0.737374246120453 experiment 0.596859020337141 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CEL ENSG00000170835 CDS Human protein_coding chr9:135942547 chr9:135942552 synonymous SNV . 0 26 hm5C_associated_SNPs_31168 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr9 135942552 135942552 1 + C T PAAD 135942553 + 135942533 135942573 41 AGGTTACTGATCCCCGAGCCCTGACGCTGGCCTATAAGGTG AGGTTACTGATCCCCGAGCTCTGACGCTGGCCTATAAGGTG < 41bp 1 0.428687501986409 1 0.352810949087143 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135942553 chr9:135942552 synonymous SNV . 0 20 hm5C_associated_SNPs_31169 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135942550-135942576
64251 chr1 224380108 224380108 1 + T G PAAD 224380097 + 224380077 224380117 41 ACAATTCCTGGATAAAAGTACTGTATGATTTTGTGATGGAT ACAATTCCTGGATAAAAGTACTGTATGATTTGGTGATGGAT < 41bp 1 0.338135393932189 1 0.129823803901672 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DEGS1 ENSG00000143753 CDS Human protein_coding chr1:224380097 chr1:224380108 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_31170 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:224380047-224380120
64251 chr16 1817158 1817158 1 + T C PAAD 1817164 + 1817144 1817184 41 CTCCAGATGGCCAGTGGGATCTGAGCAACTATCACCTAATG CTCCAGATGGCCAGCGGGATCTGAGCAACTATCACCTAATG < 41bp 1 0.528683065200284 1 0.436024248600006 experiment 0.942633869599431 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1817164 chr16:1817158 nonsynonymous SNV 0.996 4 15 hm5C_associated_SNPs_31173 0 0 2 PRPF8 POSTAR2 ENCODE chr16:1817138-1817164
64251 chr11 811728 811728 1 + G A PAAD 811709 + 811689 811729 41 CCTAATCCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCGC CCTAATCCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCAC < 41bp 1 0.339886553053265 1 0.264034748077393 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA52 ENSG00000199785 ncRNA_exonic Human snoRNA chr11:811709 chr11:811728 . . 0 40 hm5C_associated_SNPs_31174 0 0 43 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:811720-811740
64251 chr11 811728 811728 1 + G A PAAD 811715 + 811695 811735 41 CCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCGCTTGTGG CCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCACTTGTGG < 41bp 1 0.0334614522982357 1 0.0570579767227173 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA52 ENSG00000199785 ncRNA_exonic Human snoRNA chr11:811715 chr11:811728 . . 0 34 hm5C_associated_SNPs_31175 0 0 43 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:811720-811740
64251 chr11 811728 811728 1 + G A PAAD 811716 + 811696 811736 41 CCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCGCTTGTGGA CCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCACTTGTGGA < 41bp 1 0.117113898468017 1 0.0553843379020691 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA52 ENSG00000199785 ncRNA_exonic Human snoRNA chr11:811716 chr11:811728 . . 0 33 hm5C_associated_SNPs_31176 0 0 43 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:811720-811740
64251 chr15 44581358 44581358 1 + A C PAAD 44581338 + 44581318 44581358 41 AACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGA AACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGC < 41bp 1 0.284403279293635 1 0.564074695110321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CASC4 ENSG00000166734 CDS Human protein_coding chr15:44581338 chr15:44581358 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_31177 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:44581328-44581377
64251 chr16 718508 718508 1 + G T PAAD 718514 + 718494 718534 41 CCCCGCGCGGAGGAGATCACCATCCCCGCGGACGTCACCCC CCCCGCGCGGAGGATATCACCATCCCCGCGGACGTCACCCC < 41bp 1 0.316811524730536 1 0.530578315258026 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:718514 chr16:718508 nonsynonymous SNV 0.847 2 15 hm5C_associated_SNPs_31178 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:718508-718509
64251 chr5 177034312 177034312 1 + G A PAAD 177034319 + 177034299 177034339 41 ACAGGTTCAACCGGGCAGCGCTCATCAACGTGGGCTTCCTG ACAGGTTCAACCGAGCAGCGCTCATCAACGTGGGCTTCCTG < 41bp 1 0.162430679704933 1 0.0231880247592926 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177034319 chr5:177034312 nonsynonymous SNV . 0 14 hm5C_associated_SNPs_31179 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585666 chr5:177034303-177034328
64251 chr3 183899752 183899752 1 + C T PAAD 183899733 + 183899713 183899753 41 AAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGTGCG AAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGTGTG < 41bp 1 0.657918158014754 1 0.661724507808685 experiment 0.684163683970493 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899733 chr3:183899752 stopgain 0.996 1 40 hm5C_associated_SNPs_31180 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr5 154179551 154179551 1 + G A PAAD 154179534 + 154179514 154179554 41 AGGGCCTGTCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC AGGGCCTGTCTGCCAGCCTGCCTGACCTGGATTCTGAAAAC < 41bp 1 0.248512141118947 1 0.0679100453853607 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179534 chr5:154179551 synonymous SNV . 0 38 hm5C_associated_SNPs_31181 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:154179533-154179558
64251 chr9 139563096 139563096 1 + C T PAAD 139563111 + 139563091 139563131 41 ACCTGCGACGGGCACCGGGCCTGCAGCACCTACCGGTGAGT ACCTGTGACGGGCACCGGGCCTGCAGCACCTACCGGTGAGT < 41bp 1 0.69673302067882 1 0.104153662919998 experiment 0.60653395864236 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139563111 chr9:139563096 synonymous SNV . 0 6 hm5C_associated_SNPs_31182 0 0 3 AARS POSTAR2 ENCODE chr9:139563091-139563121
64251 chr5 95091253 95091253 1 + A C PAAD 95091260 + 95091240 95091280 41 TGCGCTGTAAGCCATGTTTTCATGCTGCTTTTCAATGTGAA TGCGCTGTAAGCCCTGTTTTCATGCTGCTTTTCAATGTGAA < 41bp 1 0.221215479649063 1 0.105482548475266 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95091260 chr5:95091253 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_31183 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:95091234-95091273
64251 chr11 44129365 44129365 1 + C A PAAD 44129385 + 44129365 44129405 41 CTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA ATGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA < 41bp 1 0.296983657654663 1 0.0792744159698486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129385 chr11:44129365 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_31184 0 0 1 DDX3X POSTAR2 ENCODE chr11:44129348-44129404
64251 chr9 140167012 140167012 1 + G A PAAD 140167018 + 140166998 140167038 41 TCACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGT TCACCTGCACCCCAAGGTGGCCCCGTCTAAGCTGGAGGCGT < 41bp 1 0.283104321058134 1 0.0666371583938599 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167018 chr9:140167012 nonsynonymous SNV 0.676 1 15 hm5C_associated_SNPs_31185 0 0 1 SUB1 POSTAR2 ENCODE chr9:140166960-140167014
64251 chr9 140167012 140167012 1 + G A PAAD 140167019 + 140166999 140167039 41 CACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTT CACCTGCACCCCAAGGTGGCCCCGTCTAAGCTGGAGGCGTT < 41bp 1 0.251733060863961 1 0.128040313720703 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167019 chr9:140167012 nonsynonymous SNV 0.676 1 14 hm5C_associated_SNPs_31186 0 0 1 SUB1 POSTAR2 ENCODE chr9:140166960-140167014
64251 chr9 140167012 140167012 1 + G A PAAD 140167020 + 140167000 140167040 41 ACCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTTG ACCTGCACCCCAAGGTGGCCCCGTCTAAGCTGGAGGCGTTG < 41bp 1 0.089696022048601 1 0.0895507633686066 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167020 chr9:140167012 nonsynonymous SNV 0.676 1 13 hm5C_associated_SNPs_31187 0 0 1 SUB1 POSTAR2 ENCODE chr9:140166960-140167014
64251 chr9 140167012 140167012 1 + G A PAAD 140167021 + 140167001 140167041 41 CCTGCACCCCAGGGTGGCCCCGTCTAAGCTGGAGGCGTTGC CCTGCACCCCAAGGTGGCCCCGTCTAAGCTGGAGGCGTTGC < 41bp 1 0.279340717710916 1 0.161710500717163 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NELFB ENSG00000188986 CDS Human protein_coding chr9:140167021 chr9:140167012 nonsynonymous SNV 0.676 1 12 hm5C_associated_SNPs_31188 0 0 1 SUB1 POSTAR2 ENCODE chr9:140166960-140167014
64251 chr10 49639287 49639287 1 + T G PAAD 49639298 + 49639278 49639318 41 AGAATGGAGTTATACGGGGGCAGCCCTCTCCTTTAGGTTGG AGAATGGAGGTATACGGGGGCAGCCCTCTCCTTTAGGTTGG < 41bp 1 0.319962513639448 1 0.219493687152863 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8 ENSG00000107643 CDS Human protein_coding chr10:49639298 chr10:49639287 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_31189 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr10:49639233-49639287
64251 chr19 45762366 45762366 1 + C T PAAD 45762352 + 45762332 45762372 41 TCGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAACTAC TCGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGTAACTAC < 41bp 1 0.193373711579269 1 0.672901034355164 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45762352 chr19:45762366 synonymous SNV . 0 35 hm5C_associated_SNPs_31192 0 0 1 DDX3X POSTAR2 ENCODE chr19:45762247-45762369
64251 chr7 75573203 75573203 1 + T C PAAD 75573189 + 75573169 75573209 41 TTGCAGGAAAGTCCAAAGGGCTGCGCGTCTCCTGTGGCTCA TTGCAGGAAAGTCCAAAGGGCTGCGCGTCTCCTGCGGCTCA < 41bp 1 0.385860877237409 1 0.101285248994827 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA14A ENSG00000201643 ncRNA_exonic Human snoRNA chr7:75573189 chr7:75573203 . . 0 35 hm5C_associated_SNPs_31193 0 0 15 NOP58 POSTAR2 GSE43666,GSM1067861 chr7:75573179-75573217
64251 chr7 75573203 75573203 1 + T C PAAD 75573197 + 75573177 75573217 41 AAGTCCAAAGGGCTGCGCGTCTCCTGTGGCTCAGTCTTATT AAGTCCAAAGGGCTGCGCGTCTCCTGCGGCTCAGTCTTATT < 41bp 1 0.185628601392972 1 0.455709844827652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA14A ENSG00000201643 ncRNA_exonic Human snoRNA chr7:75573197 chr7:75573203 . . 0 27 hm5C_associated_SNPs_31194 0 0 15 NOP58 POSTAR2 GSE43666,GSM1067861 chr7:75573179-75573217
64251 chr7 75573203 75573203 1 + T C PAAD 75573212 + 75573192 75573232 41 CGCGTCTCCTGTGGCTCAGTCTTATTTCATACCTGCAACAT CGCGTCTCCTGCGGCTCAGTCTTATTTCATACCTGCAACAT < 41bp 1 0.110410550912617 1 0.209189116954803 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA14A ENSG00000201643 ncRNA_exonic Human snoRNA chr7:75573212 chr7:75573203 . . 0 12 hm5C_associated_SNPs_31195 0 0 15 NOP58 POSTAR2 GSE43666,GSM1067861 chr7:75573179-75573217
64251 chr3 190347219 190347219 1 + G A PAAD 190347220 + 190347200 190347240 41 ACCTCTGAGGATCTCAAGCGCAGCTATGTCTGTCATGCTAG ACCTCTGAGGATCTCAAGCACAGCTATGTCTGTCATGCTAG < 41bp 1 0.449366307863526 1 0.149909615516663 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IL1RAP ENSG00000196083 CDS Human protein_coding chr3:190347220 chr3:190347219 nonsynonymous SNV 0.987 3 20 hm5C_associated_SNPs_31196 0 0 1 GRWD1 POSTAR2 ENCODE chr3:190347131-190347296
64251 chr1 11718605 11718605 1 + C A PAAD 11718593 + 11718573 11718613 41 CCTCTGCCTGCCCCCAGCACCTGCCTCAAGTCCCAGGTGGT CCTCTGCCTGCCCCCAGCACCTGCCTCAAGTCACAGGTGGT < 41bp 1 0.214368863977974 1 0.0770134627819061 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718593 chr1:11718605 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_31197 0 0 9 BUD13 POSTAR2 ENCODE chr1:11718552-11718629
64251 chr9 123898163 123898163 1 + G T PAAD 123898159 + 123898139 123898179 41 TGCAGCAGACCCAGGGAGATCTCAGTGCCTATGAAGCTGAG TGCAGCAGACCCAGGGAGATCTCATTGCCTATGAAGCTGAG < 41bp 1 0.451911048689186 1 0.411755383014679 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898159 chr9:123898163 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_31198 0 0 11 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr11 64022436 64022436 1 + A G PAAD 64022456 + 64022436 64022476 41 ACGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTT GCGGTGGTGTCTGGGCCAGACCCAGTGAACACAGTGTTCTT < 41bp 1 0.375638058008729 1 0.108093112707138 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64022456 chr11:64022436 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_31199 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64022427-64022450
64251 chr5 118861665 118861665 1 + C T PAAD 118861674 + 118861654 118861694 41 TTTCTGCCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT TTTCTGCCAGGTGTGTGTTACAGCAGTTTGCAGATAATGAT < 41bp 1 0.727596664772787 1 0.106911063194275 experiment 0.544806670454426 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118861674 chr5:118861665 nonsynonymous SNV 0.996 3 12 hm5C_associated_SNPs_31200 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118861639-118861687
64251 chr8 17055101 17055101 1 + C A PAAD 17055095 + 17055075 17055115 41 AGCTTTTTGTCCCTAGCCATCCGATACTGTGACAGATGCCA AGCTTTTTGTCCCTAGCCATCCGATAATGTGACAGATGCCA < 41bp 1 0.172175989217895 1 0.154590457677841 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZDHHC2 ENSG00000104219 CDS Human protein_coding chr8:17055095 chr8:17055101 stopgain 0.997 0 27 hm5C_associated_SNPs_31201 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:17055095-17055127
64251 chr12 122620057 122620057 1 + C A PAAD 122620047 + 122620027 122620067 41 TCACTGCAGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCAT TCACTGCAGGCTCCTGGGGTCCCGGAGTTCAACAGCAGCAT < 41bp 1 0.359711644044456 1 0.194821268320084 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122620047 chr12:122620057 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_31202 0 0 2 DDX24 POSTAR2 ENCODE chr12:122620033-122620083
64251 chr16 85691142 85691142 1 + G A PAAD 85691160 + 85691140 85691180 41 GAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA GAACAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA < 41bp 1 0.360861439006254 1 0.631797909736633 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691160 chr16:85691142 synonymous SNV . 0 3 hm5C_associated_SNPs_31206 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691142 85691142 1 + G A PAAD 85691161 + 85691141 85691181 41 AGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAG AACAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAG < 41bp 1 0.320902038963429 1 0.572735965251923 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691161 chr16:85691142 synonymous SNV . 0 2 hm5C_associated_SNPs_31207 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr1 107599623 107599623 1 + C A PAAD 107599619 + 107599599 107599639 41 GACGTGGGCGCGGGCACCGGCATTCTGAGCATCTTCTGTGC GACGTGGGCGCGGGCACCGGCATTATGAGCATCTTCTGTGC < 41bp 1 0.656465891487536 1 0.273914098739624 experiment 0.687068217024928 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599619 chr1:107599623 nonsynonymous SNV 0.980 4 25 hm5C_associated_SNPs_31208 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:107599566-107599625
64251 chr14 60591898 60591898 1 + G A PAAD 60591886 + 60591866 60591906 41 GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTC GGTCATATATTGAGAGTTTACGGTGGTGTTTTACCTTGGTC < 41bp 1 0.753300502203029 1 0.759433567523956 experiment 0.493398995593941 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591886 chr14:60591898 synonymous SNV . 0 33 hm5C_associated_SNPs_31209 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:60591880-60591900
64251 chr5 85915251 85915251 1 + T G PAAD 85915269 + 85915249 85915289 41 CCTTCCTTGTAGTAAGACACCAACTGCTTAAAACATAAGGA CCGTCCTTGTAGTAAGACACCAACTGCTTAAAACATAAGGA < 41bp 1 0.334243020882418 1 0.402180016040802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COX7C ENSG00000127184 CDS Human protein_coding chr5:85915269 chr5:85915251 nonsynonymous SNV 0.495 4 3 hm5C_associated_SNPs_31211 0 0 42 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:85915209-85915276
64251 chr14 103804290 103804290 1 + C T PAAD 103804271 + 103804251 103804291 41 GTCTAACCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCC GTCTAACCTATTCCGGTGTTCTCTCTCCCATGAGACAAGTC < 41bp 1 0.0811159278377949 1 0.0654754340648651 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804271 chr14:103804290 . . 0 40 hm5C_associated_SNPs_31212 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 103804290 103804290 1 + C T PAAD 103804277 + 103804257 103804297 41 CCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATA CCTATTCCGGTGTTCTCTCTCCCATGAGACAAGTCGTTATA < 41bp 1 0.204131829690074 1 0.274011045694351 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804277 chr14:103804290 . . 0 34 hm5C_associated_SNPs_31213 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 103804290 103804290 1 + C T PAAD 103804278 + 103804258 103804298 41 CTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATAT CTATTCCGGTGTTCTCTCTCCCATGAGACAAGTCGTTATAT < 41bp 1 0.090082416108346 1 0.156279802322388 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804278 chr14:103804290 . . 0 33 hm5C_associated_SNPs_31214 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr14 103804290 103804290 1 + C T PAAD 103804279 + 103804259 103804299 41 TATTCCGGTGTTCTCTCTCCCATGAGACAAGCCGTTATATA TATTCCGGTGTTCTCTCTCCCATGAGACAAGTCGTTATATA < 41bp 1 0.490013368855711 1 0.36325204372406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA28 ENSG00000272533 ncRNA_exonic Human snoRNA chr14:103804279 chr14:103804290 . . 0 32 hm5C_associated_SNPs_31215 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103804288-103804312
64251 chr16 3076719 3076719 1 + G A PAAD 3076699 + 3076679 3076719 41 GAGGGTCCTCCGGGGCCACACAGACTACATCCACTGCCTGG GAGGGTCCTCCGGGGCCACACAGACTACATCCACTGCCTGA < 41bp 1 0.568430034392289 1 0.456067770719528 experiment 0.863139931215422 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control THOC6 ENSG00000131652 CDS Human protein_coding chr16:3076699 chr16:3076719 nonsynonymous SNV 0.989 1 41 hm5C_associated_SNPs_31217 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3076695-3076722
64251 chr3 42685488 42685488 1 + C T PAAD 42685493 + 42685473 42685513 41 AGAAGTTATAATCGGCGGTCCAGGTGGGTCTCTCTCCTTTA AGAAGTTATAATCGGTGGTCCAGGTGGGTCTCTCTCCTTTA < 41bp 1 0.546683847061769 1 0.6304070353508 experiment 0.906632305876461 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NKTR ENSG00000114857 CDS Human protein_coding chr3:42685493 chr3:42685488 nonsynonymous SNV 0.994 0 16 hm5C_associated_SNPs_31221 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:42685408-42685510
64251 chr8 22475262 22475262 1 + G T PAAD 22475273 + 22475253 22475293 41 AACCAGTCAGAGATGGAGTTCTCTTCACTTCAGGACATGGT AACCAGTCATAGATGGAGTTCTCTTCACTTCAGGACATGGT < 41bp 1 0.0554938447406278 1 0.0877296924591064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22475273 chr8:22475262 stopgain 0.999 1 10 hm5C_associated_SNPs_31224 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22475235-22475291
64251 chr2 26999265 26999265 1 + G T PAAD 26999245 + 26999225 26999265 41 CCTCCTTCCCCACAGGGGACCTGTTGATCATCATGGCCCAG CCTCCTTCCCCACAGGGGACCTGTTGATCATCATGGCCCAT < 41bp 1 0.0921615104979723 1 0.218355566263199 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC35F6 ENSG00000213699 CDS Human protein_coding chr2:26999245 chr2:26999265 nonsynonymous SNV 0.996 4 41 hm5C_associated_SNPs_31227 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:26999244-26999269
64251 chrX 110954908 110954908 1 + G A PAAD 110954916 + 110954896 110954936 41 TTTGAAGTATGTGGAGGGATCTTTTGAGAAATACCTGGAAC TTTGAAGTATGTAGAGGGATCTTTTGAGAAATACCTGGAAC < 41bp 1 0.124910982147797 1 0.0593499541282654 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110954916 chrX:110954908 synonymous SNV . 0 13 hm5C_associated_SNPs_31228 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chrX:110954857-110954923
64251 chr14 94568225 94568225 1 + G A PAAD 94568211 + 94568191 94568231 41 CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCGCATCCT CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCACATCCT < 41bp 1 0.788448973779821 1 0.38884025812149 experiment 0.423102052440358 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568211 chr14:94568225 nonsynonymous SNV 0.001 1 35 hm5C_associated_SNPs_31229 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr17 49239138 49239138 1 + G A PAAD 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCAGCTTGT < 41bp 1 0.418503188679261 1 0.454023748636246 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239138 nonsynonymous SNV 0.837 0 35 hm5C_associated_SNPs_31230 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr5 173378900 173378900 1 + A C PAAD 173378893 + 173378873 173378913 41 ATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTT ATGGTTCACAGCCACTTGACCCACGAACAACTATATTTGTT < 41bp 1 0.16879160262073 1 0.18086189031601 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173378893 chr5:173378900 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_31231 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:173378900-173378911
64251 chr19 10200693 10200693 1 + C A PAAD 10200684 + 10200664 10200704 41 CAGTTTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCG CAGTTTGCCTGCTCCTCCTGCGACCACGTATGGTGGCGCCG < 41bp 1 0.222878614764982 1 0.440305888652802 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200684 chr19:10200693 nonsynonymous SNV 0.998 0 30 hm5C_associated_SNPs_31232 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr19 10200693 10200693 1 + C A PAAD 10200688 + 10200668 10200708 41 TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGCGTG TTGCCTGCTCCTCCTGCGACCACGTATGGTGGCGCCGCGTG < 41bp 1 0.645102427882534 1 0.536223948001862 experiment 0.709795144234933 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200688 chr19:10200693 nonsynonymous SNV 0.998 0 26 hm5C_associated_SNPs_31233 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr14 97018865 97018865 1 + G A PAAD 97018858 + 97018838 97018878 41 TTGACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGA TTGACAGCTCTCAATGACAGCAGCCTCAACTTGTCTATGGA < 41bp 1 0.23683933200501 1 0.245135724544525 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97018858 chr14:97018865 nonsynonymous SNV 0.995 1 28 hm5C_associated_SNPs_31234 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:97018824-97018879
64251 chr18 13059253 13059253 1 + C T PAAD 13059272 + 13059252 13059292 41 GCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGC GTAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGC < 41bp 1 0.516166994880811 1 0.266122072935104 experiment 0.967666010238378 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13059272 chr18:13059253 nonsynonymous SNV 0.005 3 2 hm5C_associated_SNPs_31235 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr18:13059253-13059254
64251 chr14 105179914 105179914 1 + C T PAAD 105179915 + 105179895 105179935 41 GGGGGCAGCAAGGCAGCCTCCATGGATCCCCCAAGAGCCAC GGGGGCAGCAAGGCAGCCTTCATGGATCCCCCAAGAGCCAC < 41bp 1 0.672498801834939 1 0.417495906352997 experiment 0.655002396330121 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105179915 chr14:105179914 nonsynonymous SNV 0.000 1 20 hm5C_associated_SNPs_31236 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105179912-105179935
64251 chr17 62223484 62223484 1 + A G PAAD 62223469 + 62223449 62223489 41 ATGACATTCCAATTAAAGCACGTGTTAGACTGCTGACGCGG ATGACATTCCAATTAAAGCACGTGTTAGACTGCTGGCGCGG < 41bp 1 0.418640942218526 1 0.301680535078049 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223469 chr17:62223484 . . 0 36 hm5C_associated_SNPs_31239 0 0 116 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223484 62223484 1 + A G PAAD 62223481 + 62223461 62223501 41 TTAAAGCACGTGTTAGACTGCTGACGCGGGTGATGCGAACT TTAAAGCACGTGTTAGACTGCTGGCGCGGGTGATGCGAACT < 41bp 1 0.605489427645481 1 0.252405226230621 experiment 0.789021144709039 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223481 chr17:62223484 . . 0 24 hm5C_associated_SNPs_31240 0 0 116 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr17 62223484 62223484 1 + A G PAAD 62223496 + 62223476 62223516 41 GACTGCTGACGCGGGTGATGCGAACTGGAGTCTGAGCCTGC GACTGCTGGCGCGGGTGATGCGAACTGGAGTCTGAGCCTGC < 41bp 1 0.49980666104801 1 0.453072398900986 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD104 ENSG00000199753 ncRNA_exonic Human snoRNA chr17:62223496 chr17:62223484 . . 0 9 hm5C_associated_SNPs_31241 0 0 116 FBL POSTAR2 GSE43666,GSM1067865 chr17:62223365-62223517
64251 chr1 24996768 24996768 1 + A C PAAD 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAACAGG < 41bp 1 0.547503279461328 1 0.641106128692627 experiment 0.904993441077344 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996768 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_31242 0 0 1 TRA2A POSTAR2 ENCODE chr1:24996753-24996806
64251 chr19 10794144 10794144 1 + C T PAAD 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCCCTGACACCTCTCTCGCCCTTG < 41bp 1 0.410097770626765 1 0.0616968274116516 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794144 nonsynonymous SNV 0.249 0 29 hm5C_associated_SNPs_31243 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr19 10794144 10794144 1 + C T PAAD 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCCCTGACACCTCTCTCGCCCTTGATGCCA < 41bp 1 0.0722896524807815 1 0.0413323938846588 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794144 nonsynonymous SNV 0.249 0 23 hm5C_associated_SNPs_31244 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10794047-10794166
64251 chr3 38524754 38524754 1 + G A PAAD 38524735 + 38524715 38524755 41 GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGG GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCAG < 41bp 1 0.25230564930773 1 0.384191632270813 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524735 chr3:38524754 synonymous SNV . 0 40 hm5C_associated_SNPs_31245 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr3 38524754 38524754 1 + G A PAAD 38524770 + 38524750 38524790 41 CCTCGGACTGTCTCGTTTCCCTGGTGACCTCTGTCACCAAT CCTCAGACTGTCTCGTTTCCCTGGTGACCTCTGTCACCAAT < 41bp 1 0.786666869504302 1 0.429903417825699 experiment 0.426666260991397 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524770 chr3:38524754 synonymous SNV . 0 5 hm5C_associated_SNPs_31246 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr3 41275096 41275096 1 + C T PAAD 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGTTGGAATTCTTTCTAACCTCACTTGCAAT < 41bp 1 0.100005987704676 1 0.135598421096802 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275096 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_31247 0 0 33 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr17 33900720 33900720 1 + C A PAAD 33900704 + 33900684 33900724 41 ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCA ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGATTCA < 41bp 1 0.249887197879399 1 0.0419555902481079 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900704 chr17:33900720 . . 0 37 hm5C_associated_SNPs_31248 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900720 33900720 1 + C A PAAD 33900705 + 33900685 33900725 41 TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCAC TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGATTCAC < 41bp 1 0.735506087127808 1 0.0612927675247192 experiment 0.528987825744385 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900705 chr17:33900720 . . 0 36 hm5C_associated_SNPs_31249 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900720 33900720 1 + C A PAAD 33900715 + 33900695 33900735 41 AGAGCCTGACCTGGTATTGCCATTGCTTCACTGTTGGCTTT AGAGCCTGACCTGGTATTGCCATTGATTCACTGTTGGCTTT < 41bp 1 0.261323624284575 1 0.0858983397483826 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900715 chr17:33900720 . . 0 26 hm5C_associated_SNPs_31250 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900720 33900720 1 + C A PAAD 33900725 + 33900705 33900745 41 CTGGTATTGCCATTGCTTCACTGTTGGCTTTGACCAGGGTA CTGGTATTGCCATTGATTCACTGTTGGCTTTGACCAGGGTA < 41bp 1 0.380836663198606 1 0.147619843482971 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900725 chr17:33900720 . . 0 16 hm5C_associated_SNPs_31251 0 0 43 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr11 10772966 10772966 1 + C T PAAD 10772973 + 10772953 10772993 41 CCCCATCATGTCGCGGGGCTCCATCGAGATTCCCCTCCGGG CCCCATCATGTCGTGGGGCTCCATCGAGATTCCCCTCCGGG < 41bp 1 0.125441360874845 1 0.090250700712204 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10772973 chr11:10772966 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_31252 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10772957-10772995
64251 chr1 28607282 28607282 1 + C T PAAD 28607298 + 28607278 28607318 41 TACGCCCTCCGTGCCATCACCCGCTACATGACCTGACTCCT TACGTCCTCCGTGCCATCACCCGCTACATGACCTGACTCCT < 41bp 1 0.127353303394792 1 0.638968110084534 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28607298 chr1:28607282 nonsynonymous SNV 0.944 1 5 hm5C_associated_SNPs_31253 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:28607267-28607348
64251 chr9 133760702 133760702 1 + C T PAAD 133760722 + 133760702 133760742 41 CGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT TGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT < 41bp 1 0.0650209926062457 1 0.143247932195663 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760722 chr9:133760702 stopgain 0.996 1 1 hm5C_associated_SNPs_31258 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr6 138576683 138576683 1 + C T PAAD 138576703 + 138576683 138576723 41 CGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC TGTCTCCGGGAGTGTCTGACCACGGCCGAGGATCAGGCTGC < 41bp 1 0.756785875946881 1 0.804862022399902 experiment 0.486428248106238 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF3 ENSG00000112379 CDS Human protein_coding chr6:138576703 chr6:138576683 nonsynonymous SNV 0.119 0 1 hm5C_associated_SNPs_31259 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr6:138576680-138576700
64251 chr17 20135100 20135100 1 + T C PAAD 20135081 + 20135061 20135101 41 TTATTTCTAGGTAGTGTGATCAAGCTGGAGGAACAGAAGTC TTATTTCTAGGTAGTGTGATCAAGCTGGAGGAACAGAAGCC < 41bp 1 0.258701185443368 1 0.516099870204926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135081 chr17:20135100 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_31262 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr17 20135100 20135100 1 + T C PAAD 20135094 + 20135074 20135114 41 GTGTGATCAAGCTGGAGGAACAGAAGTCAGACCTGGAGAGG GTGTGATCAAGCTGGAGGAACAGAAGCCAGACCTGGAGAGG < 41bp 1 0.564418972326958 1 0.428783506155014 experiment 0.871162055346084 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135094 chr17:20135100 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_31263 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr17 20135100 20135100 1 + T C PAAD 20135101 + 20135081 20135121 41 CAAGCTGGAGGAACAGAAGTCAGACCTGGAGAGGCAGCTGA CAAGCTGGAGGAACAGAAGCCAGACCTGGAGAGGCAGCTGA < 41bp 1 0.17559457160901 1 0.350308954715729 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135101 chr17:20135100 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_31264 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20135060-20135120
64251 chr7 129394908 129394908 1 + G A PAAD 129394901 + 129394881 129394921 41 ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG ATGTACCAGACTGTGGTGACCAGCCTCACCCAGGGCAACGG < 41bp 1 0.583863391957741 1 0.192728310823441 experiment 0.832273216084517 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394901 chr7:129394908 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_31265 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr3 142739482 142739482 1 + G A PAAD 142739480 + 142739460 142739500 41 GAGAGACATAAAACAAAAGGCAGATTAAGTCGATTTGAACC GAGAGACATAAAACAAAAGGCAAATTAAGTCGATTTGAACC < 41bp 1 0.181319360650217 1 0.394461810588837 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142739480 chr3:142739482 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_31266 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:142739457-142739493
64251 chr17 72239558 72239558 1 + C T PAAD 72239546 + 72239526 72239566 41 CTCCTGCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGC CTCCTGCTCTTTATCCTGGACCTGGTCATCTGTCTCATTGC < 41bp 1 0.141740689004926 1 0.051023006439209 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72239546 chr17:72239558 synonymous SNV . 0 33 hm5C_associated_SNPs_31267 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:72239533-72239564
64251 chr17 72435964 72435964 1 + C A PAAD 72435978 + 72435958 72435998 41 CTCTTCCTGTTCCCAGGGGCCTGGGCCCAGGGCCATGTCCC CTCTTCATGTTCCCAGGGGCCTGGGCCCAGGGCCATGTCCC < 41bp 1 0.667264202173871 1 0.545791923999786 experiment 0.665471595652257 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72435978 chr17:72435964 nonsynonymous SNV 0.984 2 7 hm5C_associated_SNPs_31268 0 0 5 DDX3X POSTAR2 ENCODE chr17:72435936-72436018
64251 chr10 17276772 17276772 1 + A G PAAD 17276757 + 17276737 17276777 41 CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGGCAGGT < 41bp 1 0.300754738748721 1 0.161451011896133 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276757 chr10:17276772 synonymous SNV . 0 36 hm5C_associated_SNPs_31269 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr3 32483422 32483422 1 + G A PAAD 32483437 + 32483417 32483457 41 TTTGCGACTTGATAATGATCCTCGCCTTTTACCTGGTCCAC TTTGCAACTTGATAATGATCCTCGCCTTTTACCTGGTCCAC < 41bp 1 0.498880766394587 1 0.079690009355545 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483437 chr3:32483422 nonsynonymous SNV 0.994 0 6 hm5C_associated_SNPs_31270 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:32483382-32483427
64251 chr16 599309 599309 1 + G A PAAD 599322 + 599302 599342 41 TGGCGGTGCTGGCGGAGCGGCCGGACCTGGTGGAGCGGGTG TGGCGGTACTGGCGGAGCGGCCGGACCTGGTGGAGCGGGTG < 41bp 1 0.30934889286102 1 0.696242928504944 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:599322 chr16:599309 synonymous SNV . 0 8 hm5C_associated_SNPs_31271 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:599306-599332
64251 chr4 88047336 88047336 1 + C T PAAD 88047316 + 88047296 88047336 41 CCCGCCACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGC CCCGCCACCCGTGTCCTCGTCCTCCCAGAAGCCAGCCAAGT < 41bp 1 0.0314926623861213 1 0.0901947617530823 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88047316 chr4:88047336 nonsynonymous SNV 0.764 0 41 hm5C_associated_SNPs_31272 0 0 2 GRWD1 POSTAR2 ENCODE chr4:88047262-88047405
64251 chr22 29533635 29533635 1 + G A PAAD 29533628 + 29533608 29533648 41 TATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGC TATTTCTTCTCTGATCGCATCAATCAGACCCAGGGATTTGC < 41bp 1 0.0271977566099937 1 0.0666908025741577 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533628 chr22:29533635 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_31273 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:29533624-29533635
64251 chr4 119200407 119200407 1 + A G PAAD 119200388 + 119200368 119200408 41 CAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATAT CAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATGT < 41bp 1 0.0449736152079137 1 0.451236963272095 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200388 chr4:119200407 . . 0 40 hm5C_associated_SNPs_31275 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr4 119200407 119200407 1 + A G PAAD 119200389 + 119200369 119200409 41 AGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATATC AGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATGTC < 41bp 1 0.269991252086286 1 0.0901718437671661 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200389 chr4:119200407 . . 0 39 hm5C_associated_SNPs_31276 0 0 37 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr10 112335133 112335133 1 + G A PAAD 112335144 + 112335124 112335164 41 GTCATCTTCGTCCAGAACAGCGGTTGGCTTTATTGCATGTG GTCATCTTCATCCAGAACAGCGGTTGGCTTTATTGCATGTG < 41bp 1 0.186254293253178 1 0.114853501319885 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112335144 chr10:112335133 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_31277 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:112335103-112335147
64251 chr20 36662454 36662454 1 + G A PAAD 36662465 + 36662445 36662485 41 CCACCGCAAGCACGCGGGACCCATCGTCTCCGTGTGGCACC CCACCGCAAACACGCGGGACCCATCGTCTCCGTGTGGCACC < 41bp 1 0.129741090146959 1 0.0243767201900482 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPRD1B ENSG00000101413 CDS Human protein_coding chr20:36662465 chr20:36662454 synonymous SNV . 0 10 hm5C_associated_SNPs_31279 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:36662454-36662478
64251 chr5 179193073 179193073 1 + C A PAAD 179193078 + 179193058 179193098 41 CACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCCAAACC CACCTCTGGTCAGCCACGGGCGGACAATCCCAGTCCAAACC < 41bp 1 0.126442119903049 1 0.429622948169708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAML1 ENSG00000161021 CDS Human protein_coding chr5:179193078 chr5:179193073 synonymous SNV . 0 16 hm5C_associated_SNPs_31280 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:179193020-179193099
64251 chr9 131198036 131198036 1 + G A PAAD 131198051 + 131198031 131198071 41 GCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACA GCTCAATGACACGGAGACATCCTCTCCATGGGATGATGACA < 41bp 1 0.0447513052010078 1 0.0277771353721619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198051 chr9:131198036 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_31282 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr9 131198036 131198036 1 + G A PAAD 131198054 + 131198034 131198074 41 CAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCG CAATGACACGGAGACATCCTCTCCATGGGATGATGACAGCG < 41bp 1 0.698147052557319 1 0.965308964252472 experiment 0.603705894885362 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198054 chr9:131198036 nonsynonymous SNV 1.000 5 3 hm5C_associated_SNPs_31283 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr17 7800528 7800528 1 + C A PAAD 7800537 + 7800517 7800557 41 AGTGAAAGACCCGCACTATGCTGAGATGGAGGAGAAGTACT AGTGAAAGACCAGCACTATGCTGAGATGGAGGAGAAGTACT < 41bp 1 0.489779495191723 1 0.504289925098419 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7800537 chr17:7800528 nonsynonymous SNV 0.945 3 12 hm5C_associated_SNPs_31284 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7800522-7800571
64251 chr7 39991439 39991439 1 + G T PAAD 39991428 + 39991408 39991448 41 AGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCT AGCAGCTGGCGCCGCTCTCGCAGTCCCTACATCCCTGTGCT < 41bp 1 0.244430472471818 1 0.71311616897583 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991428 chr7:39991439 nonsynonymous SNV 0.992 1 32 hm5C_associated_SNPs_31285 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:39991415-39991439
64251 chr17 38610230 38610230 1 + C T PAAD 38610248 + 38610228 38610268 41 GCCGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT GCTGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT < 41bp 1 0.361102458911334 1 0.0991674065589905 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610248 chr17:38610230 synonymous SNV . 0 3 hm5C_associated_SNPs_31286 0 0 2 SND1 POSTAR2 ENCODE chr17:38610195-38610246
64251 chr19 12924273 12924273 1 + G T PAAD 12924253 + 12924233 12924273 41 CACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAG CACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAT < 41bp 1 0.558371306206363 1 0.263803064823151 experiment 0.883257387587275 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924253 chr19:12924273 nonsynonymous SNV 0.730 1 41 hm5C_associated_SNPs_31287 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:12924230-12924311
64251 chr19 12924273 12924273 1 + G T PAAD 12924277 + 12924257 12924297 41 CTGGAGTCAGCAACCAGCCTCTAGCAGCTGCCTCTACGCGC CTGGAGTCAGCAACCATCCTCTAGCAGCTGCCTCTACGCGC < 41bp 1 0.508503232671639 1 0.21572157740593 experiment 0.982993534656722 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924277 chr19:12924273 nonsynonymous SNV 0.730 1 17 hm5C_associated_SNPs_31288 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:12924230-12924311
64251 chr1 214819626 214819626 1 + G A PAAD 214819612 + 214819592 214819632 41 TCAGAACTAGACAAGTTACTCTCTTCATTTAAAAGTCTGTT TCAGAACTAGACAAGTTACTCTCTTCATTTAAAAATCTGTT < 41bp 1 0.0579529923882497 1 0.134652018547058 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819612 chr1:214819626 nonsynonymous SNV 0.010 0 35 hm5C_associated_SNPs_31290 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819574-214819648
64251 chr19 11105645 11105645 1 + C T PAAD 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGTGG < 41bp 1 0.61837081918984 1 0.733787775039673 experiment 0.763258361620321 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105645 nonsynonymous SNV 0.006 4 39 hm5C_associated_SNPs_31292 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:11105641-11105673
64251 chr6 7579637 7579637 1 + T C PAAD 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGCTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA < 41bp 1 0.302405647672582 1 0.391205310821533 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579637 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_31294 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:7579620-7579640
64251 chr5 145849225 145849225 1 + A C PAAD 145849206 + 145849186 145849226 41 AGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAAAA AGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAACA < 41bp 1 0.772090267854896 1 0.769789218902588 experiment 0.455819464290208 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145849206 chr5:145849225 nonsynonymous SNV 1.000 5 40 hm5C_associated_SNPs_31295 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:145849181-145849299
64251 chr5 92923924 92923924 1 + C A PAAD 92923934 + 92923914 92923954 41 TACGCCTCACCTGGAGCGAGCTGTTCGTGCTCAACGCGGCC TACGCCTCACATGGAGCGAGCTGTTCGTGCTCAACGCGGCC < 41bp 1 0.106754249684304 1 0.072956919670105 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923934 chr5:92923924 synonymous SNV . 0 11 hm5C_associated_SNPs_31296 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:92923918-92923930
64251 chr11 66294149 66294149 1 + C T PAAD 66294153 + 66294133 66294173 41 CATCAAGATCCTGAAGCGTACAGCAGTGTTTGTAGAGGGAG CATCAAGATCCTGAAGTGTACAGCAGTGTTTGTAGAGGGAG < 41bp 1 0.777396986140043 1 0.101105183362961 experiment 0.445206027719914 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66294153 chr11:66294149 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_31297 0 0 1 PPIG POSTAR2 ENCODE chr11:66294117-66294218
64251 chr7 79842159 79842159 1 + T A PAAD 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATCAAAAAGAGCCCTCACACTATATGCTATCCAG < 41bp 1 0.222738842891005 1 0.155076593160629 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842159 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_31299 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr12 6618917 6618917 1 + G A PAAD 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT GCCTTTCGAGCTCAGGGGCCCCTAGCTATGCTGCAGCACTT < 41bp 1 0.0537743420871404 1 0.0866893231868744 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618917 stopgain . 0 24 hm5C_associated_SNPs_31300 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:6618880-6618945
64251 chr16 30680180 30680180 1 + G A PAAD 30680193 + 30680173 30680213 41 CTGCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCC CTGCACCACAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCC < 41bp 1 0.0524571734618113 1 0.022062212228775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30680193 chr16:30680180 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_31302 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30680157-30680190
64251 chr1 32620216 32620216 1 + A G PAAD 32620232 + 32620212 32620252 41 GACAATTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA GACAGTTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA < 41bp 1 0.238790697785946 1 0.445767015218735 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620232 chr1:32620216 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_31303 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32620203-32620233
64251 chr3 49719835 49719835 1 + G A PAAD 49719826 + 49719806 49719846 41 TGGCCAGGACAGCATCCTCTCCCTCCCAGGCAATGTGGGCC TGGCCAGGACAGCATCCTCTCCCTCCCAGACAATGTGGGCC < 41bp 1 0.0660501166427457 1 0.155412435531616 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49719826 chr3:49719835 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_31304 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:49719804-49719840
64251 chr8 33356000 33356000 1 + C T PAAD 33355999 + 33355979 33356019 41 TGAAGATCAGGATGGTAAATCCTCCAGTGAGGAGGAGGAAG TGAAGATCAGGATGGTAAATCTTCCAGTGAGGAGGAGGAAG < 41bp 1 0.297722668561165 1 0.12075001001358 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAK16 ENSG00000198042 CDS Human protein_coding chr8:33355999 chr8:33356000 synonymous SNV . 0 22 hm5C_associated_SNPs_31305 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:33355977-33356003
64251 chr16 309975 309975 1 + C A PAAD 309995 + 309975 310015 41 CTCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG ATCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG < 41bp 1 0.593698888970518 1 0.0427016913890839 experiment 0.812602222058963 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:309995 chr16:309975 synonymous SNV . 0 1 hm5C_associated_SNPs_31306 0 0 1 SF3B1 POSTAR2 ENCODE chr16:309970-309980
64251 chr10 75529125 75529125 1 + C A PAAD 75529135 + 75529115 75529155 41 TTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCAT TTTACACCAGATGTGCAGGGCAGCGTCGGCTCCGCATCCAT < 41bp 1 0.508110663626559 1 0.120126157999039 experiment 0.983778672746882 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529135 chr10:75529125 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_31307 0 0 7 FMR1 POSTAR2 ENCODE chr10:75529116-75529172
64251 chr10 75529125 75529125 1 + C A PAAD 75529138 + 75529118 75529158 41 ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAAT ACACCAGATGTGCAGGGCAGCGTCGGCTCCGCATCCATAAT < 41bp 1 0.443536903620494 1 0.247593432664871 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529138 chr10:75529125 nonsynonymous SNV 0.998 3 8 hm5C_associated_SNPs_31308 0 0 7 FMR1 POSTAR2 ENCODE chr10:75529116-75529172
64251 chr20 42089353 42089353 1 + C T PAAD 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGTGGAGCAAAGGTCGATCACGTTCTCG < 41bp 1 0.494417296708005 1 0.342775464057922 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089353 nonsynonymous SNV 0.994 4 16 hm5C_associated_SNPs_31310 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:42089335-42089356
64251 chr8 110569174 110569174 1 + A T PAAD 110569185 + 110569165 110569205 41 TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA TTGTTATTATGAAGAGAGAACCATTGAATTTTGGCATCCCA < 41bp 1 0.0368316122913672 1 0.0842180550098419 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569185 chr8:110569174 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_31311 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:110569167-110569190
64251 chr19 13054419 13054419 1 + C T PAAD 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGTAACGA < 41bp 1 0.551845123333885 1 0.145428597927094 experiment 0.89630975333223 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054419 synonymous SNV . 0 36 hm5C_associated_SNPs_31312 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054419 13054419 1 + C T PAAD 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCATACGCTGAGGAGTTTGGTAACGAGA < 41bp 1 0.70470129029921 1 0.355654209852219 experiment 0.590597419401581 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054419 synonymous SNV . 0 34 hm5C_associated_SNPs_31313 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054419 13054419 1 + C T PAAD 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGTAACGAGACGTGGGGCGTAACAAAGGTGA < 41bp 1 0.68679968622335 1 0.384872108697891 experiment 0.626400627553299 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054419 synonymous SNV . 0 13 hm5C_associated_SNPs_31314 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr3 186502632 186502632 1 + G A PAAD 186502615 + 186502595 186502635 41 ATGGCAATCATCTTTCGGGACTGACCTGAAATGAAGAGAAT ATGGCAATCATCTTTCGGGACTGACCTGAAATGAAGAAAAT < 41bp 1 0.170177646535598 1 0.0827708840370178 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD2 ENSG00000238942 ncRNA_exonic Human snoRNA chr3:186502615 chr3:186502632 . . 0 38 hm5C_associated_SNPs_31315 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186502598-186502651
64251 chr3 186502632 186502632 1 + G A PAAD 186502620 + 186502600 186502640 41 AATCATCTTTCGGGACTGACCTGAAATGAAGAGAATACTCA AATCATCTTTCGGGACTGACCTGAAATGAAGAAAATACTCA < 41bp 1 0.500814032212866 1 0.369195520877838 experiment 0.998371935574269 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD2 ENSG00000238942 ncRNA_exonic Human snoRNA chr3:186502620 chr3:186502632 . . 0 33 hm5C_associated_SNPs_31316 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186502598-186502651
64251 chr3 186502632 186502632 1 + G A PAAD 186502637 + 186502617 186502657 41 GACCTGAAATGAAGAGAATACTCATTGCTGATCACTTGATT GACCTGAAATGAAGAAAATACTCATTGCTGATCACTTGATT < 41bp 1 0.355340633985305 1 0.127881973981857 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD2 ENSG00000238942 ncRNA_exonic Human snoRNA chr3:186502637 chr3:186502632 . . 0 16 hm5C_associated_SNPs_31317 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186502598-186502651
64251 chr3 186502632 186502632 1 + G A PAAD 186502639 + 186502619 186502659 41 CCTGAAATGAAGAGAATACTCATTGCTGATCACTTGATTAT CCTGAAATGAAGAAAATACTCATTGCTGATCACTTGATTAT < 41bp 1 0.311160955944876 1 0.0301434695720673 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD2 ENSG00000238942 ncRNA_exonic Human snoRNA chr3:186502639 chr3:186502632 . . 0 14 hm5C_associated_SNPs_31318 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186502598-186502651
64251 chr3 186502632 186502632 1 + G A PAAD 186502649 + 186502629 186502669 41 AGAGAATACTCATTGCTGATCACTTGATTATTTGGGCATAA AGAAAATACTCATTGCTGATCACTTGATTATTTGGGCATAA < 41bp 1 0.160750885313222 1 0.0427212119102478 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD2 ENSG00000238942 ncRNA_exonic Human snoRNA chr3:186502649 chr3:186502632 . . 0 4 hm5C_associated_SNPs_31319 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186502598-186502651
64251 chr7 5644983 5644983 1 + G A PAAD 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA GGCGACACTCCTGTGGACTTCTTCTTCAAGTTCTGCGACTA < 41bp 1 0.214582497534498 1 0.363358974456787 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644983 nonsynonymous SNV 0.991 2 28 hm5C_associated_SNPs_31320 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr5 73981215 73981215 1 + C T PAAD 73981219 + 73981199 73981239 41 GGTGGCGGAGGCGGCTCGGGCCCCGAGCGTCTCGGCCAAGC GGTGGCGGAGGCGGCTTGGGCCCCGAGCGTCTCGGCCAAGC < 41bp 1 0.670796814507158 1 0.405761420726776 experiment 0.658406370985684 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73981219 chr5:73981215 nonsynonymous SNV 0.116 1 17 hm5C_associated_SNPs_31330 0 0 8 DDX3X POSTAR2 ENCODE chr5:73981172-73981231
64251 chr20 47896888 47896888 1 + C T PAAD 47896873 + 47896853 47896893 41 CCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAG CCTGCTGGCATATATGATGACTTAGCTTTTTTCCCTGACAG < 41bp 1 0.118212153329886 1 0.0489648580551147 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896873 chr20:47896888 . . 0 36 hm5C_associated_SNPs_31331 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896888 47896888 1 + C T PAAD 47896878 + 47896858 47896898 41 TGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGA TGGCATATATGATGACTTAGCTTTTTTCCCTGACAGATCGA < 41bp 1 0.0499229329431718 1 0.149653017520905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896878 chr20:47896888 . . 0 31 hm5C_associated_SNPs_31332 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896888 47896888 1 + C T PAAD 47896885 + 47896865 47896905 41 TATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTT TATGATGACTTAGCTTTTTTCCCTGACAGATCGACTATGTT < 41bp 1 0.0763803730467177 1 0.031457781791687 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896885 chr20:47896888 . . 0 24 hm5C_associated_SNPs_31333 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896888 47896888 1 + C T PAAD 47896886 + 47896866 47896906 41 ATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTG ATGATGACTTAGCTTTTTTCCCTGACAGATCGACTATGTTG < 41bp 1 0.227046687277327 1 0.0582643747329712 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896886 chr20:47896888 . . 0 23 hm5C_associated_SNPs_31334 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896888 47896888 1 + C T PAAD 47896887 + 47896867 47896907 41 TGATGACTTAGCTTTTTTCCCCGACAGATCGACTATGTTGA TGATGACTTAGCTTTTTTCCCTGACAGATCGACTATGTTGA < 41bp 1 0.139742109612524 1 0.0440666973590851 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896887 chr20:47896888 . . 0 22 hm5C_associated_SNPs_31335 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr20 47896888 47896888 1 + C T PAAD 47896899 + 47896879 47896919 41 TTTTTTCCCCGACAGATCGACTATGTTGATCTAACTTTTCT TTTTTTCCCTGACAGATCGACTATGTTGATCTAACTTTTCT < 41bp 1 0.129756811641788 1 0.0927293300628662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896899 chr20:47896888 . . 0 10 hm5C_associated_SNPs_31336 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896878-47896897
64251 chr7 23221735 23221735 1 + C G PAAD 23221740 + 23221720 23221760 41 TTCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTG TTCTTCCTTCAAGGCGGGTGCCGCTTTGGAGATCGGTGCTG < 41bp 1 0.439512728100936 1 0.229033052921295 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221740 chr7:23221735 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_31337 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr7 23221735 23221735 1 + C G PAAD 23221741 + 23221721 23221761 41 TCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCGGTGCTGG TCTTCCTTCAAGGCGGGTGCCGCTTTGGAGATCGGTGCTGG < 41bp 1 0.581063909255532 1 0.0929826200008392 experiment 0.837872181488935 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221741 chr7:23221735 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_31338 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr1 27269375 27269375 1 + T C PAAD 27269371 + 27269351 27269391 41 GCCCTATGCAGCTGGCGGTCCCTTTCTGTGTGAACTTCCGG GCCCTATGCAGCTGGCGGTCCCTTCCTGTGTGAACTTCCGG < 41bp 1 0.00999135654792157 1 0.0262914597988129 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUDC ENSG00000090273 CDS Human protein_coding chr1:27269371 chr1:27269375 nonsynonymous SNV 0.264 1 25 hm5C_associated_SNPs_31339 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:27269360-27269380
64251 chr8 54793583 54793583 1 + C T PAAD 54793600 + 54793580 54793620 41 GCACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCG GCATGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCG < 41bp 1 0.674652224489961 1 0.238914579153061 experiment 0.650695551020077 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RGS20 ENSG00000147509 CDS Human protein_coding chr8:54793600 chr8:54793583 nonsynonymous SNV 0.704 1 4 hm5C_associated_SNPs_31341 0 0 1 TIA1 POSTAR2 ENCODE chr8:54793565-54793601
64251 chr8 54793583 54793583 1 + C T PAAD 54793601 + 54793581 54793621 41 CACGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCGG CATGGCGGACGGAGGCGAGCCGGCCGGGGCTTCCTCCCCGG < 41bp 1 0.79511498669557 1 0.541901707649231 experiment 0.409770026608861 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RGS20 ENSG00000147509 CDS Human protein_coding chr8:54793601 chr8:54793583 nonsynonymous SNV 0.704 1 3 hm5C_associated_SNPs_31342 0 0 1 TIA1 POSTAR2 ENCODE chr8:54793565-54793601
64251 chrX 2632474 2632474 1 + G T PAAD 2632489 + 2632469 2632509 41 GTTTCGATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT GTTTCTATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT < 41bp 1 0.0850871101257207 1 0.046071857213974 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2632489 chrX:2632474 nonsynonymous SNV 0.081 3 6 hm5C_associated_SNPs_31343 0 0 4 DDX3X POSTAR2 ENCODE chrX:2632462-2632478
64251 chr9 35733435 35733435 1 + T C PAAD 35733415 + 35733395 35733435 41 GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTAT GATTGCTAGGCTAGTACTGACAGATGAGGAGAAGAGTCTAC < 41bp 1 0.413784616515766 1 0.204895824193954 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733415 chr9:35733435 synonymous SNV . 0 41 hm5C_associated_SNPs_31344 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr9:35733426-35733452
64251 chr11 67810964 67810964 1 + G T PAAD 67810957 + 67810937 67810977 41 GGAGCAGCCGCTGGAGCACCCCGTGACGGTGAGCAGCTGGC GGAGCAGCCGCTGGAGCACCCCGTGACTGTGAGCAGCTGGC < 41bp 1 0.222546910896635 1 0.451175272464752 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67810957 chr11:67810964 synonymous SNV . 0 28 hm5C_associated_SNPs_31346 0 0 6 PRPF8 POSTAR2 ENCODE chr11:67810926-67811008
64251 chr9 95869990 95869990 1 + G A PAAD 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCGCCTGGTGCAGGACACACCTTTCCTGACAGGCCATGGGC < 41bp 1 0.0756340923083865 1 0.10735297203064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869990 synonymous SNV . 0 19 hm5C_associated_SNPs_31347 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:95869990-95869991
64251 chr13 20221309 20221309 1 + C G PAAD 20221300 + 20221280 20221320 41 AGAAAACTGTGCCTAAAAAGCAGAGGAATCAAGACAGAAGC AGAAAACTGTGCCTAAAAAGCAGAGGAATGAAGACAGAAGC < 41bp 1 0.737479286067869 1 0.826746881008148 experiment 0.525041427864261 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20221300 chr13:20221309 nonsynonymous SNV 0.149 1 30 hm5C_associated_SNPs_31349 0 0 3 RBM22 POSTAR2 ENCODE chr13:20221141-20221312
64251 chr1 154207157 154207157 1 + C A PAAD 154207147 + 154207127 154207167 41 ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGA ACGGAATCCAATGAGGAAGGCAAAGAAAATAGAGACCGGGA < 41bp 1 0.430217841429471 1 0.411491364240646 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207147 chr1:154207157 synonymous SNV . 0 31 hm5C_associated_SNPs_31351 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr18 48604705 48604705 1 + G A PAAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCTGAGGACCGGATTACCCAAGACAGAGCA < 41bp 1 0.458473442082879 1 0.731878042221069 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604705 stopgain 0.998 1 16 hm5C_associated_SNPs_31352 1 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:48604684-48604713
64251 chr7 43810766 43810766 1 + A T PAAD 43810765 + 43810745 43810785 41 GGAAGAGACCAAGATGAATGCAGAGGTGAGTTCTTTACAAA GGAAGAGACCAAGATGAATGCTGAGGTGAGTTCTTTACAAA < 41bp 1 0.696926903910173 1 0.502149820327759 experiment 0.606146192179655 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BLVRA ENSG00000106605 CDS Human protein_coding chr7:43810765 chr7:43810766 synonymous SNV . 0 22 hm5C_associated_SNPs_31353 0 0 3 DDX3X POSTAR2 ENCODE chr7:43810758-43810768
64251 chr11 58347089 58347089 1 + G A PAAD 58347094 + 58347074 58347114 41 GCAAGAAGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG GCAAGAAGAGTCCGCAACTCCTGTGAGTAACAGTCTTTCAG < 41bp 1 0.699294152960504 1 0.217726081609726 experiment 0.601411694078991 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58347094 chr11:58347089 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_31359 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:58347055-58347093
64251 chr11 61897787 61897787 1 + C T PAAD 61897785 + 61897765 61897805 41 AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC AAGCTCAGGATTGCGCAGGTCTTCCCTGGCCCACGGGACTC < 41bp 1 0.178012836306778 1 0.0397676229476929 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897785 chr11:61897787 nonsynonymous SNV 0.034 2 23 hm5C_associated_SNPs_31360 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61897773-61897792
64251 chr1 46073323 46073323 1 + G A PAAD 46073326 + 46073306 46073346 41 AGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAGAGTGCA AGAAAAATCAGTTTCTGAAACTGATGTCCAAGAAGAGTGCA < 41bp 1 0.548300091270172 1 0.100716769695282 experiment 0.903399817459656 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073326 chr1:46073323 nonsynonymous SNV 0.448 2 18 hm5C_associated_SNPs_31361 0 0 5 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:46073320-46073340
64251 chr1 46073323 46073323 1 + G A PAAD 46073334 + 46073314 46073354 41 CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCAGAGAAAAA CAGTTTCTGAAACTGATGTCCAAGAAGAGTGCAGAGAAAAA < 41bp 1 0.585713562564315 1 0.691026329994202 experiment 0.828572874871371 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073334 chr1:46073323 nonsynonymous SNV 0.448 2 10 hm5C_associated_SNPs_31362 0 0 5 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:46073320-46073340
64251 chr2 171818252 171818252 1 + A C PAAD 171818251 + 171818231 171818271 41 ACCAATGAATCCAGCTACTACATTACCAGGTAACCACCAGG ACCAATGAATCCAGCTACTACCTTACCAGGTAACCACCAGG < 41bp 1 0.0704670744971442 1 0.125041037797928 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818251 chr2:171818252 synonymous SNV . 0 22 hm5C_associated_SNPs_31363 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:171818244-171818259
64251 chr17 38320039 38320039 1 + C T PAAD 38320033 + 38320013 38320053 41 GCAGACTTCTGTGAGGGATCCATCTCCAGAAGCAGATGCTC GCAGACTTCTGTGAGGGATCCATCTCTAGAAGCAGATGCTC < 41bp 1 0.206711384589878 1 0.0281947553157806 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320033 chr17:38320039 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_31366 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:38319994-38320043
64251 chr17 38320039 38320039 1 + C T PAAD 38320054 + 38320034 38320074 41 ATCTCCAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGA ATCTCTAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGA < 41bp 1 0.474978910019246 1 0.569097816944122 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320054 chr17:38320039 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_31367 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:38319994-38320043
64251 chr17 38320039 38320039 1 + C T PAAD 38320059 + 38320039 38320079 41 CAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAA TAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAA < 41bp 1 0.399619830163622 1 0.0981243848800659 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320059 chr17:38320039 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_31368 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:38319994-38320043
64251 chr16 16150130 16150130 1 + C T PAAD 16150150 + 16150130 16150170 41 CCTGGGTCTGCACGCCCTTTCTGGTGAGTGAAGCCACATTT TCTGGGTCTGCACGCCCTTTCTGGTGAGTGAAGCCACATTT < 41bp 1 0.69495163404404 1 0.616272330284119 experiment 0.610096731911921 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16150150 chr16:16150130 nonsynonymous SNV 0.955 4 1 hm5C_associated_SNPs_31369 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:16150121-16150143
64251 chr16 29819148 29819148 1 + C T PAAD 29819141 + 29819121 29819161 41 TGCTCCCACTGTGGCAAGAGCTTCTCCCGGTGTGCACGGGG TGCTCCCACTGTGGCAAGAGCTTCTCCTGGTGTGCACGGGG < 41bp 1 0.122830054567178 1 0.118446946144104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29819141 chr16:29819148 nonsynonymous SNV 0.999 3 28 hm5C_associated_SNPs_31373 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:29819134-29819158
64251 chr9 101891209 101891209 1 + C T PAAD 101891198 + 101891178 101891218 41 ACTTGTGTGACAGATGGGCTCTGCTTTGTCTCTGTCACAGA ACTTGTGTGACAGATGGGCTCTGCTTTGTCTTTGTCACAGA < 41bp 1 0.718221395086396 1 0.107181191444397 experiment 0.563557209827208 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101891198 chr9:101891209 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_31374 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:101891180-101891229
64251 chr16 2569716 2569716 1 + C T PCPG 2569701 + 2569681 2569721 41 CTCATCTTCGCCGAGGTGCTCGGCCTCTACGGTCTCATCGT CTCATCTTCGCCGAGGTGCTCGGCCTCTACGGTCTTATCGT < 41bp 1 0.449278139500731 1 0.467565715312958 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569701 chr16:2569716 synonymous SNV . 0 36 hm5C_associated_SNPs_31375 0 0 42 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2569660-2569720
64251 chr17 29554565 29554565 1 + T A PCPG 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AAAGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA < 41bp 1 0.104130429213277 1 0.0754954516887665 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554565 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_31377 0 0 5 BUD13 POSTAR2 ENCODE chr17:29554498-29554628
64251 chr15 52339183 52339183 1 + C T PCPG 52339181 + 52339161 52339201 41 GATAGGTGACTTTGGTCTTGCACGGATCATGGATCCTCATT GATAGGTGACTTTGGTCTTGCATGGATCATGGATCCTCATT < 41bp 1 0.580525755434437 1 0.243615359067917 experiment 0.838948489131126 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52339181 chr15:52339183 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_31379 0 0 5 IGF2BP1 POSTAR2 ENCODE chr15:52339148-52339184
64251 chr2 46607406 46607406 1 + A G PCPG 46607394 + 46607374 46607414 41 CAATGAGCTGGACTTGGAGACACTGGCACCCTATATCCCCA CAATGAGCTGGACTTGGAGACACTGGCACCCTGTATCCCCA < 41bp 1 0.339188955312691 1 0.150430858135223 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607394 chr2:46607406 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_31380 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:46607369-46607415
64251 chr10 115661652 115661652 1 + C A PCPG 115661650 + 115661630 115661670 41 CTCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCAC CTCGTAGGAGGAGAAAGAGACCACATGGTAATGACAGTCAC < 41bp 1 0.683933769537 1 0.234959602355957 experiment 0.632132460926 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661650 chr10:115661652 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_31381 0 0 2 PRPF8 POSTAR2 ENCODE chr10:115661643-115661698
64251 chr10 115661652 115661652 1 + C A PCPG 115661651 + 115661631 115661671 41 TCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCACT TCGTAGGAGGAGAAAGAGACCACATGGTAATGACAGTCACT < 41bp 1 0.492962702857516 1 0.516550719738007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661651 chr10:115661652 nonsynonymous SNV 0.974 4 22 hm5C_associated_SNPs_31382 0 0 2 PRPF8 POSTAR2 ENCODE chr10:115661643-115661698
64251 chr9 130197489 130197489 1 + C T PCPG 130197488 + 130197468 130197508 41 GGAAAGTCCAGGAGCCTTGTCCTACTAGGTAAGGAAACTGT GGAAAGTCCAGGAGCCTTGTCTTACTAGGTAAGGAAACTGT < 41bp 1 0.0708582562942933 1 0.0426547527313232 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130197488 chr9:130197489 synonymous SNV . 0 22 hm5C_associated_SNPs_31383 0 0 1 PPIG POSTAR2 ENCODE chr9:130197427-130197493
64251 chr19 14574926 14574926 1 + G A PCPG 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAAAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC < 41bp 1 0.0562652761111307 1 0.226233571767807 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574926 synonymous SNV . 0 5 hm5C_associated_SNPs_31384 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14574875-14574926
64251 chr2 46607400 46607400 1 + C T PCPG 46607394 + 46607374 46607414 41 CAATGAGCTGGACTTGGAGACACTGGCACCCTATATCCCCA CAATGAGCTGGACTTGGAGACACTGGTACCCTATATCCCCA < 41bp 1 0.396521405018456 1 0.138660818338394 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607394 chr2:46607400 nonsynonymous SNV 1.000 5 27 hm5C_associated_SNPs_31385 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:46607369-46607415
64251 chr2 46607402 46607402 1 + C T PCPG 46607394 + 46607374 46607414 41 CAATGAGCTGGACTTGGAGACACTGGCACCCTATATCCCCA CAATGAGCTGGACTTGGAGACACTGGCATCCTATATCCCCA < 41bp 1 0.317929900688158 1 0.132356822490692 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607394 chr2:46607402 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_31386 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:46607369-46607415
64251 chr2 46607403 46607403 1 + C T PCPG 46607394 + 46607374 46607414 41 CAATGAGCTGGACTTGGAGACACTGGCACCCTATATCCCCA CAATGAGCTGGACTTGGAGACACTGGCACTCTATATCCCCA < 41bp 1 0.28909532361758 1 0.16081503033638 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607394 chr2:46607403 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_31387 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:46607369-46607415
64251 chr19 36579971 36579971 1 + G T PCPG 36579965 + 36579945 36579985 41 AGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCAT AGAGACATCCAGATGATCAGCTGTGGTGCTGACAAGAGCAT < 41bp 1 0.27666932174229 1 0.170216083526611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36579965 chr19:36579971 synonymous SNV . 0 27 hm5C_associated_SNPs_31388 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36579946-36579976
64251 chr20 30366768 30366768 1 + G T PCPG 30366771 + 30366751 30366791 41 AACAGATATCATTTGAGGAGCAAGAAGGATGATATTAGTAA AACAGATATCATTTGAGTAGCAAGAAGGATGATATTAGTAA < 41bp 1 0.597795949848354 1 0.287963032722473 experiment 0.804408100303292 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30366771 chr20:30366768 nonsynonymous SNV 0.996 4 18 hm5C_associated_SNPs_31389 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:30366735-30366784
64251 chr13 28854620 28854620 1 + A T PCPG 28854635 + 28854615 28854655 41 ATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATG ATTTTTTACTCAATTGGATGCTGCTCAAATGAGAAATGATG < 41bp 1 0.135547533801572 1 0.141248971223831 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAN3 ENSG00000152520 CDS Human protein_coding chr13:28854635 chr13:28854620 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_31390 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr13:28854603-28854631
64251 chr16 1551468 1551468 1 + C G PCPG 1551467 + 1551447 1551487 41 GCTGCTGGCCTTGGCCTCCCCCCAGCCTGCGGGTGACGGCG GCTGCTGGCCTTGGCCTCCCCGCAGCCTGCGGGTGACGGCG < 41bp 1 0.659252759091568 1 0.744426250457764 experiment 0.681494481816864 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551467 chr16:1551468 synonymous SNV . 0 22 hm5C_associated_SNPs_31392 0 0 1 SF3B4 POSTAR2 ENCODE chr16:1551462-1551481
64251 chr16 2732747 2732747 1 + G A PCPG 2732745 + 2732725 2732765 41 GGCAGACCCTGTGCCGGGACCCGAAATCCTTCCTGTACCGC GGCAGACCCTGTGCCGGGACCCAAAATCCTTCCTGTACCGC < 41bp 1 0.36149958884602 1 0.308103203773499 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2732745 chr16:2732747 synonymous SNV . 0 23 hm5C_associated_SNPs_31393 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2732729-2732761
64251 chr5 138651823 138651823 1 + C T PCPG 138651827 + 138651807 138651847 41 AGGAATTCTGGGACCTCCACCTCCCTCATTTCATCTTGGGG AGGAATTCTGGGACCTTCACCTCCCTCATTTCATCTTGGGG < 41bp 1 0.333448366852707 1 0.447630256414413 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MATR3 ENSG00000015479 CDS Human protein_coding chr5:138651827 chr5:138651823 nonsynonymous SNV 0.988 3 17 hm5C_associated_SNPs_31394 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:138651758-138651870
64251 chr2 231931688 231931688 1 + C A PCPG 231931696 + 231931676 231931716 41 GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATCGT GGAGAAAAAAAAACAATTGACCAGAGATTGGAAGGCATCGT < 41bp 1 0.571035527246587 1 0.0851923227310181 experiment 0.857928945506825 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931696 chr2:231931688 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_31395 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr5 21491513 21491513 1 + G A PCPG 21491518 + 21491498 21491538 41 TCAGAAAACAAAGTCGTGGACAACCAGGCTGGGACCCAGGG TCAGAAAACAAAGTCATGGACAACCAGGCTGGGACCCAGGG < 41bp 1 0.137841923727441 1 0.0885415971279144 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21491518 chr5:21491513 . . 0 16 hm5C_associated_SNPs_31396 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:21491475-21491513
64251 chr20 60701439 60701439 1 + G T PCPG 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTACGTCCCGCTGGCGGCCAGCTCCCTGCTCAGCC < 41bp 1 0.604538324658357 1 0.304646730422974 experiment 0.790923350683286 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701439 nonsynonymous SNV 0.919 2 12 hm5C_associated_SNPs_31397 0 0 3 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr19 45797661 45797661 1 + C T PCPG 45797648 + 45797628 45797668 41 ATGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG ATGACCCGCAGAAACACCTACGTTTGCACAGAATGCCCGGG < 41bp 1 0.0472861375313378 1 0.0518009960651398 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797648 chr19:45797661 nonsynonymous SNV 0.796 4 34 hm5C_associated_SNPs_31399 0 0 1 PPIG POSTAR2 ENCODE chr19:45797645-45797700
64251 chr17 71232433 71232433 1 + C T PCPG 71232418 + 71232398 71232438 41 AGGAGTCCCTACTGATGTTACAGTTACTGAGACTCCAGAAA AGGAGTCCCTACTGATGTTACAGTTACTGAGACTCTAGAAA < 41bp 1 0.23179697670529 1 0.0734883844852448 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232418 chr17:71232433 nonsynonymous SNV 0.010 1 36 hm5C_associated_SNPs_31400 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr17:71232414-71232433
64251 chr17 71232433 71232433 1 + C T PCPG 71232445 + 71232425 71232465 41 TGAGACTCCAGAAAAGAACACAGAATCCCTCATTTTAAGCC TGAGACTCTAGAAAAGAACACAGAATCCCTCATTTTAAGCC < 41bp 1 0.506447109161834 1 0.14512899518013 experiment 0.987105781676332 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232445 chr17:71232433 nonsynonymous SNV 0.010 1 9 hm5C_associated_SNPs_31401 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr17:71232414-71232433
64251 chr10 31812941 31812941 1 + G T PCPG 31812931 + 31812911 31812951 41 GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGA GAATGACTCTGATTCTACACCGCCCAAAAATAAAATGCGGA < 41bp 1 0.232483066822577 1 0.367946684360504 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31812931 chr10:31812941 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_31402 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:31812934-31812948
64251 chr9 130434339 130434339 1 + C T PCPG 130434344 + 130434324 130434364 41 TTACAGACCACCATGCGGGACCTGTCCCAGATGCTGAAGAA TTACAGACCACCATGTGGGACCTGTCCCAGATGCTGAAGAA < 41bp 1 0.0351894758617711 1 0.0587117671966553 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130434344 chr9:130434339 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_31403 0 0 3 UCHL5 POSTAR2 ENCODE chr9:130434327-130434393
64251 chr14 71570317 71570317 1 + T G PCPG 71570324 + 71570304 71570344 41 AGCCACGAACAGCTTAAAGACATTCTTGGGGGTCCTATCAG AGCCACGAACAGCGTAAAGACATTCTTGGGGGTCCTATCAG < 41bp 1 0.0670648677116523 1 0.130319148302078 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71570324 chr14:71570317 nonsynonymous SNV 0.970 4 14 hm5C_associated_SNPs_31404 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:71570315-71570344
64251 chr7 23207596 23207596 1 + G T PCPG 23207600 + 23207580 23207620 41 TGTGGTGGAAGTTTAGGAAACAATGTTTCTGGGAGAGTGCT TGTGGTGGAAGTTTAGTAAACAATGTTTCTGGGAGAGTGCT < 41bp 1 0.419872441070545 1 0.0981455147266388 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL7 ENSG00000122550 CDS Human protein_coding chr7:23207600 chr7:23207596 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_31405 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:23207559-23207640
64251 chr16 67662331 67662331 1 + G A PRAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCGGGGAGAAGCCTTACGCCTGCAACCACTGCG < 41bp 1 0.256593069808777 1 0.175270020961761 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662331 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_31408 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr19 3762707 3762707 1 + C G PRAD 3762687 + 3762667 3762707 41 AACGTGCACTTGCAAGCTGCCCGCAATACGTCATGGCGACC AACGTGCACTTGCAAGCTGCCCGCAATACGTCATGGCGACG < 41bp 1 0.374304912729165 1 0.0783068239688873 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762687 chr19:3762707 synonymous SNV . 0 41 hm5C_associated_SNPs_31409 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr19 3762707 3762707 1 + C G PRAD 3762698 + 3762678 3762718 41 GCAAGCTGCCCGCAATACGTCATGGCGACCAAACGCCTTTT GCAAGCTGCCCGCAATACGTCATGGCGACGAAACGCCTTTT < 41bp 1 0.630248479102285 1 0.227081120014191 experiment 0.73950304179543 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762698 chr19:3762707 synonymous SNV . 0 30 hm5C_associated_SNPs_31410 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr7 100775170 100775170 1 + T C PRAD 100775150 + 100775130 100775170 41 CTTCCTGATCATTGATTTTCCCATAGGTATGATCAGCAACT CTTCCTGATCATTGATTTTCCCATAGGTATGATCAGCAACC < 41bp 1 0.265332608440997 1 0.0528745353221893 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100775150 chr7:100775170 synonymous SNV . 0 41 hm5C_associated_SNPs_31411 0 0 6 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:100775160-100775180
64251 chr6 83905528 83905528 1 + A T PRAD 83905517 + 83905497 83905537 41 GACAACAGTGCATCTTATTTCCTGAACAGAAAGCTTGTATA GACAACAGTGCATCTTATTTCCTGAACAGAATGCTTGTATA < 41bp 1 0.507749368906028 1 0.421922236680984 experiment 0.984501262187943 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RWDD2A ENSG00000013392 CDS Human protein_coding chr6:83905517 chr6:83905528 nonsynonymous SNV 0.864 1 32 hm5C_associated_SNPs_31413 0 0 1 RBM15 POSTAR2 ENCODE chr6:83905465-83905551
64251 chr1 156202161 156202161 1 + C T PRAD 156202172 + 156202152 156202192 41 TGCAGCCTGCGATGACACAGCAAATCTATGACAAGTTTATA TGCAGCCTGTGATGACACAGCAAATCTATGACAAGTTTATA < 41bp 1 0.103315316238677 1 0.146287709474564 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PMF1;PMF1-BGLAP ENSG00000160783;ENSG00000260238 CDS Human other chr1:156202172 chr1:156202161 nonsynonymous SNV 0.890 0 10 hm5C_associated_SNPs_31414 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:156202133-156202162
64251 chr6 35438057 35438057 1 + C T PRAD 35438048 + 35438028 35438068 41 TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAAC TAAATAAGGCAGGAAAGTTCCCTTCCCTGTTCACACACAAC < 41bp 1 0.0223667427698294 1 0.124905675649643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438048 chr6:35438057 nonsynonymous SNV 0.996 4 30 hm5C_associated_SNPs_31415 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:35438002-35438069
64251 chr8 100182325 100182325 1 + C T PRAD 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACTTGTACCAGTTATTCCCTCTTTCAGC < 41bp 1 0.0859366637208492 1 0.103050649166107 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182325 nonsynonymous SNV 0.999 1 16 hm5C_associated_SNPs_31417 0 0 1 EIF3D POSTAR2 ENCODE chr8:100182316-100182392
64251 chr8 92090653 92090653 1 + G A PRAD 92090658 + 92090638 92090678 41 ATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA ATTGAAAACTTAACAAGAGCCAGACATATGGAAAGTGAGAA < 41bp 1 0.469634199961024 1 0.346044838428497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92090658 chr8:92090653 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_31418 0 0 5 GRWD1 POSTAR2 ENCODE chr8:92090593-92090765
64251 chrX 70516423 70516423 1 + G A PRAD 70516419 + 70516399 70516439 41 TTGTTCTTTCTTCCAGATTTCCTCGTCCTGTGACTGTGGAG TTGTTCTTTCTTCCAGATTTCCTCATCCTGTGACTGTGGAG < 41bp 1 0.164648516487008 1 0.0791921615600586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516419 chrX:70516423 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_31419 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chrX 70516423 70516423 1 + G A PRAD 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCATCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT < 41bp 1 0.0974494346329075 1 0.074492335319519 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516423 nonsynonymous SNV 0.997 2 4 hm5C_associated_SNPs_31420 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr10 43285947 43285947 1 + G A PRAD 43285946 + 43285926 43285966 41 ATTAAAACACAGGTTCTGGACGGAAGTTTACCCGGTACGAA ATTAAAACACAGGTTCTGGACAGAAGTTTACCCGGTACGAA < 41bp 1 0.663381453683204 1 0.383385956287384 experiment 0.673237092633592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43285946 chr10:43285947 synonymous SNV . 0 22 hm5C_associated_SNPs_31421 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43285934-43285952
64251 chr19 50302915 50302915 1 + G T PRAD 50302928 + 50302908 50302948 41 GGCAGCGGGCGGCTGACCTCCTCTACGCCATGTGTGACCGG GGCAGCGTGCGGCTGACCTCCTCTACGCCATGTGTGACCGG < 41bp 1 0.630517263215771 1 0.771962881088257 experiment 0.738965473568458 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302928 chr19:50302915 synonymous SNV . 0 8 hm5C_associated_SNPs_31422 0 0 3 DGCR8 POSTAR2 ENCODE chr19:50302881-50302917
64251 chr4 6695686 6695686 1 + C T PRAD 6695701 + 6695681 6695721 41 ATGGGCATGATCATAGACGTCTTTTCCCGATATTCGGGCAG ATGGGTATGATCATAGACGTCTTTTCCCGATATTCGGGCAG < 41bp 1 0.128833348127774 1 0.0333919525146484 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control S100P ENSG00000163993 CDS Human protein_coding chr4:6695701 chr4:6695686 synonymous SNV . 0 6 hm5C_associated_SNPs_31423 0 0 3 DDX3X POSTAR2 ENCODE chr4:6695608-6695688
64251 chr19 14020732 14020732 1 + G A PRAD 14020742 + 14020722 14020762 41 GGCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCA GGCTTTGGTCAGGGGCCAGCCCCCAGCCCTGGAGAAGCTCA < 41bp 1 0.405887678479943 1 0.855999708175659 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020742 chr19:14020732 nonsynonymous SNV 0.932 3 11 hm5C_associated_SNPs_31424 0 0 5 BUD13 POSTAR2 ENCODE chr19:14020723-14020759
64251 chr19 14020732 14020732 1 + G A PRAD 14020743 + 14020723 14020763 41 GCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAA GCTTTGGTCAGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAA < 41bp 1 0.234454097971245 1 0.444519698619843 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020743 chr19:14020732 nonsynonymous SNV 0.932 3 10 hm5C_associated_SNPs_31425 0 0 5 BUD13 POSTAR2 ENCODE chr19:14020723-14020759
64251 chr19 14020732 14020732 1 + G A PRAD 14020744 + 14020724 14020764 41 CTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAA CTTTGGTCAGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAA < 41bp 1 0.109725851628507 1 0.480218350887299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020744 chr19:14020732 nonsynonymous SNV 0.932 3 9 hm5C_associated_SNPs_31426 0 0 5 BUD13 POSTAR2 ENCODE chr19:14020723-14020759
64251 chr19 14020732 14020732 1 + G A PRAD 14020745 + 14020725 14020765 41 TTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAAG TTTGGTCAGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAAG < 41bp 1 0.423987087307192 1 0.535374045372009 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020745 chr19:14020732 nonsynonymous SNV 0.932 3 8 hm5C_associated_SNPs_31427 0 0 5 BUD13 POSTAR2 ENCODE chr19:14020723-14020759
64251 chr2 109365442 109365442 1 + C T PRAD 109365446 + 109365426 109365466 41 ATTGTTGAAACTTTTGCCAACAAAAGCGGGCAGTCTGCATT ATTGTTGAAACTTTTGTCAACAAAAGCGGGCAGTCTGCATT < 41bp 1 0.411182925407615 1 0.13994699716568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109365446 chr2:109365442 nonsynonymous SNV 0.979 3 17 hm5C_associated_SNPs_31428 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:109365399-109365447
64251 chr1 39908220 39908220 1 + T C PRAD 39908204 + 39908184 39908224 41 AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGAG AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGCTGAG < 41bp 1 0.0651045539155401 1 0.49465012550354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39908204 chr1:39908220 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_31431 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39908132-39908231
64251 chr15 64418402 64418402 1 + C T PRAD 64418395 + 64418375 64418415 41 AGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTC AGAATGGCTTCATTGTCCCTCCGCCCCTGGAGAAGAGCCTC < 41bp 1 0.0997540408563657 1 0.327610433101654 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418395 chr15:64418402 nonsynonymous SNV 0.966 4 28 hm5C_associated_SNPs_31432 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418402 64418402 1 + C T PRAD 64418396 + 64418376 64418416 41 GAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCA GAATGGCTTCATTGTCCCTCCGCCCCTGGAGAAGAGCCTCA < 41bp 1 0.246215417211709 1 0.316763877868652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418396 chr15:64418402 nonsynonymous SNV 0.966 4 27 hm5C_associated_SNPs_31433 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418402 64418402 1 + C T PRAD 64418398 + 64418378 64418418 41 ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA ATGGCTTCATTGTCCCTCCGCCCCTGGAGAAGAGCCTCATA < 41bp 1 0.169949626055326 1 0.0607319176197052 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418398 chr15:64418402 nonsynonymous SNV 0.966 4 25 hm5C_associated_SNPs_31434 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chrX 69370144 69370144 1 + G A PRAD 69370124 + 69370104 69370144 41 GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTACCG GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTACCA < 41bp 1 0.798424027964472 1 0.480901300907135 experiment 0.403151944071056 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370124 chrX:69370144 synonymous SNV . 0 41 hm5C_associated_SNPs_31435 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69370097-69370156
64251 chr1 156105740 156105740 1 + C T PRAD 156105721 + 156105701 156105741 41 AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCG AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCTG < 41bp 1 0.398462753788153 1 0.367861360311508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105721 chr1:156105740 nonsynonymous SNV 0.999 5 40 hm5C_associated_SNPs_31436 0 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr1 156105740 156105740 1 + C T PRAD 156105730 + 156105710 156105750 41 AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA AAGCTTCGAGACCTGGAGGACTCACTGGCCTGTGAGCGGGA < 41bp 1 0.247070241668215 1 0.194838762283325 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105730 chr1:156105740 nonsynonymous SNV 0.999 5 31 hm5C_associated_SNPs_31437 0 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr17 66526538 66526538 1 + T G PRAD 66526558 + 66526538 66526578 41 TCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA GCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA < 41bp 1 0.523784484563477 1 0.913977265357971 experiment 0.952431030873047 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66526558 chr17:66526538 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_31438 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:66526482-66526571
64251 chr2 99985894 99985894 1 + T C PRAD 99985879 + 99985859 99985899 41 TGAATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAAC TGAATCAATGGAATTATGTGCTGCTGTAGAAGTTACGGAAC < 41bp 1 0.505761028209032 1 0.413167238235474 experiment 0.988477943581936 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985879 chr2:99985894 nonsynonymous SNV 0.052 0 36 hm5C_associated_SNPs_31441 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985894 99985894 1 + T C PRAD 99985882 + 99985862 99985902 41 ATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAACAAG ATCAATGGAATTATGTGCTGCTGTAGAAGTTACGGAACAAG < 41bp 1 0.329924522152406 1 0.371793270111084 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985882 chr2:99985894 nonsynonymous SNV 0.052 0 33 hm5C_associated_SNPs_31442 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985894 99985894 1 + T C PRAD 99985899 + 99985879 99985919 41 CTGCTGTAGAAGTTATGGAACAAGGAGTACCAGAAAAGGAA CTGCTGTAGAAGTTACGGAACAAGGAGTACCAGAAAAGGAA < 41bp 1 0.630222141439455 1 0.587698996067047 experiment 0.73955571712109 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985899 chr2:99985894 nonsynonymous SNV 0.052 0 16 hm5C_associated_SNPs_31443 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985894 99985894 1 + T C PRAD 99985908 + 99985888 99985928 41 AAGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGACACCA AAGTTACGGAACAAGGAGTACCAGAAAAGGAAGAGACACCA < 41bp 1 0.571858730666749 1 0.346110045909882 experiment 0.856282538666502 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985908 chr2:99985894 nonsynonymous SNV 0.052 0 7 hm5C_associated_SNPs_31444 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr19 33077770 33077770 1 + G C PRAD 33077768 + 33077748 33077788 41 TTTCTGGTTCTCCTAGGTATCAGAACAAGGTTTAATAGAAA TTTCTGGTTCTCCTAGGTATCACAACAAGGTTTAATAGAAA < 41bp 1 0.571325979159937 1 0.595406532287598 experiment 0.857348041680126 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD5 ENSG00000105185 CDS Human protein_coding chr19:33077768 chr19:33077770 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_31445 0 0 8 U2AF2 POSTAR2 GSE83923,CSM2221659 chr19:33077740-33077780
64251 chr16 90028248 90028248 1 + C G PRAD 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACAGAA < 41bp 1 0.389751157653576 1 0.246823191642761 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028248 nonsynonymous SNV 0.928 4 39 hm5C_associated_SNPs_31446 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:90028234-90028261
64251 chr16 90028248 90028248 1 + C G PRAD 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACAGAAC < 41bp 1 0.106385182802891 1 0.343831151723862 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028248 nonsynonymous SNV 0.928 4 38 hm5C_associated_SNPs_31447 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:90028234-90028261
64251 chr9 106858474 106858474 1 + G C PRAD 106858485 + 106858465 106858505 41 AATGGGCAGGCTGGTATTACCAAAGCCTCTGTGTCAATCAC AATGGGCAGCCTGGTATTACCAAAGCCTCTGTGTCAATCAC < 41bp 1 0.549986167101129 1 0.495968282222748 experiment 0.900027665797742 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106858485 chr9:106858474 nonsynonymous SNV 0.994 4 10 hm5C_associated_SNPs_31449 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:106858457-106858477
64251 chr6 88374517 88374517 1 + C T PRAD 88374522 + 88374502 88374542 41 CGCCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGT CGCCCCAGACATCTGTATAGCATACAAACTGCACCTAGAGT < 41bp 1 0.104333963435798 1 0.0897960066795349 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ORC3 ENSG00000135336 CDS Human protein_coding chr6:88374522 chr6:88374517 synonymous SNV . 0 16 hm5C_associated_SNPs_31450 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:88374499-88374527
64251 chr2 235943706 235943706 1 + G T PRAD 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGATGGGACC < 41bp 1 0.242956245674351 1 0.26824888586998 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943706 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_31452 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:235943696-235943719
64251 chr4 26407825 26407825 1 + C T PRAD 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAGTGAGGGGATCAAACAGTACTTATTCTTCAT < 41bp 1 0.285270918737115 1 0.277459323406219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407825 stopgain 1.000 1 12 hm5C_associated_SNPs_31455 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:26407809-26407840
64251 chr15 75632054 75632054 1 + G A PRAD 75632036 + 75632016 75632056 41 CTGAGAGCCACCCACCCCATCTCACAGTGAATAGGTTGGCA CTGAGAGCCACCCACCCCATCTCACAGTGAATAGGTTGACA < 41bp 1 0.281601006057122 1 0.0516687631607056 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control COMMD4 ENSG00000140365 CDS Human protein_coding chr15:75632036 chr15:75632054 nonsynonymous SNV 0.858 0 39 hm5C_associated_SNPs_31456 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:75632040-75632060
64251 chr5 140731333 140731333 1 + C T PRAD 140731316 + 140731296 140731336 41 GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCTGTG < 41bp 1 0.19664697622204 1 0.0633384585380554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731316 chr5:140731333 synonymous SNV . 0 38 hm5C_associated_SNPs_31457 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr11 73020418 73020418 1 + T C PRAD 73020409 + 73020389 73020429 41 ATCGCCGCCTCCTATCCTGTCAGCCGCAGTCGTGCTGCCAG ATCGCCGCCTCCTATCCTGTCAGCCGCAGCCGTGCTGCCAG < 41bp 1 0.398391629819538 1 0.71391099691391 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73020409 chr11:73020418 synonymous SNV . 0 30 hm5C_associated_SNPs_31459 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:73020417-73020418
64251 chr19 11474850 11474850 1 + G A PRAD 11474841 + 11474821 11474861 41 TGTCTCTTTGTCTCAGGAACCCGAGGTCTGCAGGCCGCATT TGTCTCTTTGTCTCAGGAACCCGAGGTCTACAGGCCGCATT < 41bp 1 0.507849844448195 1 0.910743653774261 experiment 0.98430031110361 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474841 chr19:11474850 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_31460 0 0 3 BUD13 POSTAR2 ENCODE chr19:11474807-11474870
64251 chr11 126215288 126215288 1 + T C PRAD 126215278 + 126215258 126215298 41 GCTACCGGATGAAGGGAGACCATCTGCGAGTATACCTGCAC GCTACCGGATGAAGGGAGACCATCTGCGAGCATACCTGCAC < 41bp 1 0.325130440464353 1 0.136977940797806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DCPS ENSG00000110063 CDS Human protein_coding chr11:126215278 chr11:126215288 nonsynonymous SNV 0.524 2 31 hm5C_associated_SNPs_31461 0 0 1 LARP4 POSTAR2 ENCODE chr11:126215282-126215391
64251 chr3 126707689 126707689 1 + G A PRAD 126707684 + 126707664 126707704 41 GAACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGG GAACCTGACACTGCTGCGGGCCCACATCACGGGCCCTGTGG < 41bp 1 0.0276743536770063 1 0.0601066648960114 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707684 chr3:126707689 nonsynonymous SNV 0.332 0 26 hm5C_associated_SNPs_31462 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707689 126707689 1 + G A PRAD 126707685 + 126707665 126707705 41 AACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGGA AACCTGACACTGCTGCGGGCCCACATCACGGGCCCTGTGGA < 41bp 1 0.0833872825450854 1 0.259975016117096 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707685 chr3:126707689 nonsynonymous SNV 0.332 0 25 hm5C_associated_SNPs_31463 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707689 126707689 1 + G A PRAD 126707686 + 126707666 126707706 41 ACCTGACACTGCTGCGGGCCCACGTCACGGGCCCTGTGGAG ACCTGACACTGCTGCGGGCCCACATCACGGGCCCTGTGGAG < 41bp 1 0.227698955814901 1 0.285495340824127 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707686 chr3:126707689 nonsynonymous SNV 0.332 0 24 hm5C_associated_SNPs_31464 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707689 126707689 1 + G A PRAD 126707697 + 126707677 126707717 41 CTGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAA CTGCGGGCCCACATCACGGGCCCTGTGGAGGACAACGAGAA < 41bp 1 0.0335350096556804 1 0.0520580410957336 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707697 chr3:126707689 nonsynonymous SNV 0.332 0 13 hm5C_associated_SNPs_31465 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707689 126707689 1 + G A PRAD 126707698 + 126707678 126707718 41 TGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAG TGCGGGCCCACATCACGGGCCCTGTGGAGGACAACGAGAAG < 41bp 1 0.0212023722296385 1 0.0579433441162109 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707698 chr3:126707689 nonsynonymous SNV 0.332 0 12 hm5C_associated_SNPs_31466 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr3 126707689 126707689 1 + G A PRAD 126707699 + 126707679 126707719 41 GCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAGT GCGGGCCCACATCACGGGCCCTGTGGAGGACAACGAGAAGT < 41bp 1 0.146710175932391 1 0.0729689598083496 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707699 chr3:126707689 nonsynonymous SNV 0.332 0 11 hm5C_associated_SNPs_31467 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707688-126707689
64251 chr5 110439987 110439987 1 + C T PRAD 110439992 + 110439972 110440012 41 ACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAG ACTCTACAGCAATTGTCGGACTGACATTTCTCCATAGAGAG < 41bp 1 0.312018632970274 1 0.109237343072891 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR36 ENSG00000134987 CDS Human protein_coding chr5:110439992 chr5:110439987 nonsynonymous SNV 0.992 2 16 hm5C_associated_SNPs_31468 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:110439965-110440005
64251 chr15 41247791 41247791 1 + C T PRAD 41247789 + 41247769 41247809 41 GCGCCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG GCGCCTGAAGAGGCCATTGCCATGCAGATCCTGGCCTGCCG < 41bp 1 0.564782184335614 1 0.710103869438171 experiment 0.870435631328772 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247789 chr15:41247791 nonsynonymous SNV 0.266 0 23 hm5C_associated_SNPs_31469 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:41247759-41247791
64251 chr19 14574936 14574936 1 + C T PRAD 14574942 + 14574922 14574962 41 CTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCCCATCGAGC CTCAGAAGAGCTCGTGGGATCCTCCTTCCAGCCCATCGAGC < 41bp 1 0.0577797421268617 1 0.127759516239166 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574942 chr19:14574936 nonsynonymous SNV 0.001 1 15 hm5C_associated_SNPs_31470 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr19 804675 804675 1 + C T PRAD 804666 + 804646 804686 41 CTCAGGATCATCGTGGAGAACCTCTTCTACCCTGTGACCCT CTCAGGATCATCGTGGAGAACCTCTTCTATCCTGTGACCCT < 41bp 1 0.0812656851421877 1 0.014631062746048 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804666 chr19:804675 synonymous SNV . 0 30 hm5C_associated_SNPs_31471 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804663-804686
64251 chr19 804675 804675 1 + C T PRAD 804667 + 804647 804687 41 TCAGGATCATCGTGGAGAACCTCTTCTACCCTGTGACCCTG TCAGGATCATCGTGGAGAACCTCTTCTATCCTGTGACCCTG < 41bp 1 0.343009413890626 1 0.0264317989349365 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804667 chr19:804675 synonymous SNV . 0 29 hm5C_associated_SNPs_31472 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804663-804686
64251 chr19 804675 804675 1 + C T PRAD 804672 + 804652 804692 41 ATCATCGTGGAGAACCTCTTCTACCCTGTGACCCTGGATGT ATCATCGTGGAGAACCTCTTCTATCCTGTGACCCTGGATGT < 41bp 1 0.183088590457752 1 0.283838599920273 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804672 chr19:804675 synonymous SNV . 0 24 hm5C_associated_SNPs_31473 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804663-804686
64251 chr17 55191836 55191836 1 + G A PRAD 55191830 + 55191810 55191850 41 CCCTCTACAGCTCATGCTGCCTGATGGCATCACCGTGGAGG CCCTCTACAGCTCATGCTGCCTGATGACATCACCGTGGAGG < 41bp 1 0.251812521573427 1 0.12207892537117 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191830 chr17:55191836 nonsynonymous SNV 0.997 3 27 hm5C_associated_SNPs_31474 0 0 1 PPIG POSTAR2 ENCODE chr17:55191831-55191861
64251 chr2 190531702 190531702 1 + G A PRAD 190531711 + 190531691 190531731 41 ACATGAAGGAAGTAATTCAGCAGTTCATTGATGTCCTGAGT ACATGAAGGAAATAATTCAGCAGTTCATTGATGTCCTGAGT < 41bp 1 0.347452522916714 1 0.302768111228943 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531711 chr2:190531702 nonsynonymous SNV 0.332 0 12 hm5C_associated_SNPs_31476 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190531441-190531835
64251 chr5 68692341 68692341 1 + C T PRAD 68692324 + 68692304 68692344 41 TCATTGCCAAGGAGGAGGATCAAGTTTTCGACCCTTGCACA TCATTGCCAAGGAGGAGGATCAAGTTTTCGACCCTTGTACA < 41bp 1 0.63250647760514 1 0.469163239002228 experiment 0.734987044789719 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD17 ENSG00000152942 CDS Human protein_coding chr5:68692324 chr5:68692341 nonsynonymous SNV 0.994 2 38 hm5C_associated_SNPs_31477 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221659 chr5:68692340-68692341
64251 chr19 4323367 4323367 1 + C T PRAD 4323383 + 4323363 4323403 41 ATGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG ATGCTCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG < 41bp 1 0.336753645844512 1 0.199519485235214 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323383 chr19:4323367 nonsynonymous SNV 0.992 0 5 hm5C_associated_SNPs_31478 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4323342-4323387
64251 chr2 128944261 128944261 1 + T C PRAD 128944260 + 128944240 128944280 41 TTTTTTTAACCAAACAGGATCTGCCCAATAACATGATTCAT TTTTTTTAACCAAACAGGATCCGCCCAATAACATGATTCAT < 41bp 1 0.0159558962490533 1 0.128964871168137 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128944260 chr2:128944261 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_31479 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr2:128944253-128944274
64251 chr2 105959571 105959571 1 + C T PRAD 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGACTTAATGCATAGGAAAAGTCCTTCAGGC < 41bp 1 0.474755963446343 1 0.544778823852539 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959571 nonsynonymous SNV 0.987 0 19 hm5C_associated_SNPs_31480 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:105959539-105959577
64251 chr12 22208195 22208195 1 + G A PRAD 22208197 + 22208177 22208217 41 AGCTCTACCTCACTAGATGCCATCATAGAATTTCTTAATTA AGCTCTACCTCACTAGATACCATCATAGAATTTCTTAATTA < 41bp 1 0.543947369854039 1 0.0714987814426422 experiment 0.912105260291923 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22208197 chr12:22208195 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_31481 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:22208131-22208195
64251 chr16 457453 457453 1 + G A PRAD 457472 + 457452 457492 41 GGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC GACCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC < 41bp 1 0.781234054683464 1 0.933843016624451 experiment 0.437531890633073 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout DECR2 ENSG00000242612 CDS Human protein_coding chr16:457472 chr16:457453 nonsynonymous SNV 0.304 3 2 hm5C_associated_SNPs_31482 0 0 7 BUD13 POSTAR2 ENCODE chr16:457367-457456
64251 chr1 162469789 162469789 1 + C T PRAD 162469797 + 162469777 162469817 41 TCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCT TCTCCAAATGTGTCATCACGCTGTCTGTTGCTTGAACTCCT < 41bp 1 0.306573419612141 1 0.259838879108429 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162469797 chr1:162469789 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_31483 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469758-162469829
64251 chr1 57161695 57161695 1 + G A PRAD 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTCCCATTTGATGATGAACATGTACCTACGTTATTTAAG < 41bp 1 0.18615265765656 1 0.0252859890460968 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161695 synonymous SNV . 0 20 hm5C_associated_SNPs_31484 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:57161668-57161706
64251 chr17 79663968 79663968 1 + T C PRAD 79663977 + 79663957 79663997 41 TGCACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGC TGCACGGCGTGCACATGAGCCAGCCGGCCCCTGCCGCTGGC < 41bp 1 0.59832556616188 1 0.683139264583588 experiment 0.80334886767624 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663977 chr17:79663968 nonsynonymous SNV 0.390 0 12 hm5C_associated_SNPs_31485 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr17 79663968 79663968 1 + T C PRAD 79663980 + 79663960 79664000 41 ACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGCCCC ACGGCGTGCACATGAGCCAGCCGGCCCCTGCCGCTGGCCCC < 41bp 1 0.365175492201995 1 0.512460350990295 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663980 chr17:79663968 nonsynonymous SNV 0.390 0 9 hm5C_associated_SNPs_31486 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr19 10225358 10225358 1 + A G PRAD 10225362 + 10225342 10225382 41 CCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGT CCAAGCCCTGCCCCTCGATGCCACAGCCGCCCCTAAACCGT < 41bp 1 0.526078556501062 1 0.198327869176865 experiment 0.947842886997877 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225362 chr19:10225358 nonsynonymous SNV 0.001 1 17 hm5C_associated_SNPs_31487 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10225331-10225367
64251 chr20 33764034 33764034 1 + T C PRAD 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGCCTTCTTCGAAGTGGCTGTGAATGGGAG < 41bp 1 0.700868780890474 1 0.868622422218323 experiment 0.598262438219052 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764034 nonsynonymous SNV 0.984 0 14 hm5C_associated_SNPs_31488 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr22 38352843 38352843 1 + C T PRAD 38352823 + 38352803 38352843 41 ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCC ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCT < 41bp 1 0.700127813777463 1 0.554582357406616 experiment 0.599744372445074 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352823 chr22:38352843 synonymous SNV . 0 41 hm5C_associated_SNPs_31489 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr22 38352843 38352843 1 + C T PRAD 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT GAGGATGAAGGGCTAGATGACTTGGAGAATGCTGAAGAGGT < 41bp 1 0.518857939286946 1 0.2125124335289 experiment 0.962284121426108 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352843 synonymous SNV . 0 33 hm5C_associated_SNPs_31490 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chr1 16262309 16262309 1 + C T PRAD 16262304 + 16262284 16262324 41 GTACCGACTGCACCCCTATACTGTGCCACGGGATGTGAGGA GTACCGACTGCACCCCTATACTGTGTCACGGGATGTGAGGA < 41bp 1 0.230041851603901 1 0.196738600730896 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16262304 chr1:16262309 nonsynonymous SNV 0.910 1 26 hm5C_associated_SNPs_31491 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:16262265-16262339
64251 chr7 4825902 4825902 1 + C T PRAD 4825887 + 4825867 4825907 41 CCCTGGTCTTGCAGGGGAAGCGGCTGCAGTGGACTCGGAAG CCCTGGTCTTGCAGGGGAAGCGGCTGCAGTGGACTTGGAAG < 41bp 1 0.369580669764437 1 0.563921928405762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4825887 chr7:4825902 nonsynonymous SNV 0.425 0 36 hm5C_associated_SNPs_31492 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:4825895-4825921
64251 chr19 10789860 10789860 1 + C T PRAD 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTCGCGTGCCCACCTGGGGTCCCCTCTGAGGCTGGGTAAGG < 41bp 1 0.11031013183484 1 0.0358666479587555 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789860 stopgain 0.989 1 27 hm5C_associated_SNPs_31493 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10789832-10789861
64251 chr19 10789860 10789860 1 + C T PRAD 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TCGCGTGCCCACCTGGGGTCCCCTCTGAGGCTGGGTAAGGC < 41bp 1 0.0497304182972 1 0.0746383666992188 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789860 stopgain 0.989 1 26 hm5C_associated_SNPs_31494 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10789832-10789861
64251 chr16 78143685 78143685 1 + C T PRAD 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTGCCATATGGATGGGAACAAGAAACTGATGAGAACGGA < 41bp 1 0.406750975016885 1 0.405589878559113 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143685 nonsynonymous SNV 0.937 0 11 hm5C_associated_SNPs_31496 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143676-78143702
64251 chr19 39979204 39979204 1 + C T PRAD 39979223 + 39979203 39979243 41 ACGTGCGAACCGTGCTGGAGCACTATGCCCTGGAGGATGAC ATGTGCGAACCGTGCTGGAGCACTATGCCCTGGAGGATGAC < 41bp 1 0.452420427537754 1 0.0740809142589569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39979223 chr19:39979204 synonymous SNV . 0 2 hm5C_associated_SNPs_31497 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39979189-39979225
64251 chr1 223943318 223943318 1 + G T PRAD 223943301 + 223943281 223943321 41 TTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGAC TTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGATGAC < 41bp 1 0.700825281322784 1 0.593195140361786 experiment 0.598349437354432 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943301 chr1:223943318 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_31501 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr19 36594100 36594100 1 + C T PRAD 36594096 + 36594076 36594116 41 GCTGAAGAGACCCTGGAGGCCTGGCGCCCACCACGTGAGTG GCTGAAGAGACCCTGGAGGCCTGGTGCCCACCACGTGAGTG < 41bp 1 0.594232408994236 1 0.283011347055435 experiment 0.811535182011528 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36594096 chr19:36594100 nonsynonymous SNV 0.040 0 25 hm5C_associated_SNPs_31503 0 0 1 SF3B4 POSTAR2 ENCODE chr19:36594058-36594109
64251 chr4 524247 524247 1 + G A PRAD 524262 + 524242 524282 41 GTTTTGTTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGC GTTTTATTTATGTCTTTGTCCTTGGCATTCTGTTCACGGGC < 41bp 1 0.290552164516762 1 0.303731977939606 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:524262 chr4:524247 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_31504 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:524222-524247
64251 chr1 120269491 120269491 1 + C T PRAD 120269481 + 120269461 120269501 41 TCTATCCTTGCAGGCAGATTCCCCAGGCGACGGCTTCGATG TCTATCCTTGCAGGCAGATTCCCCAGGCGATGGCTTCGATG < 41bp 1 0.758245323895986 1 0.270674407482147 experiment 0.483509352208029 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120269481 chr1:120269491 nonsynonymous SNV 0.648 1 31 hm5C_associated_SNPs_31506 2 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:120269480-120269500
64251 chr22 23596133 23596133 1 + C T PRAD 23596125 + 23596105 23596145 41 AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTCTCGGG AGCAGCAAGGGCAGGGGCAGCCGGGATGTGCTGGTCTCGGG < 41bp 1 0.625022537879916 1 0.672729313373566 experiment 0.749954924240168 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23596125 chr22:23596133 nonsynonymous SNV 0.459 0 29 hm5C_associated_SNPs_31507 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23596122-23596160
64251 chr1 36755134 36755134 1 + G A PRAD 36755116 + 36755096 36755136 41 GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGACA < 41bp 1 0.432743773889226 1 0.199031889438629 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755116 chr1:36755134 nonsynonymous SNV 0.996 1 39 hm5C_associated_SNPs_31508 0 0 18 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:36755120-36755140
64251 chr5 159849845 159849845 1 + C A PRAD 159849863 + 159849843 159849883 41 GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAA GTATGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAA < 41bp 1 0.141210827161189 1 0.160175681114197 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159849863 chr5:159849845 nonsynonymous SNV 0.165 1 3 hm5C_associated_SNPs_31509 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr5:159849826-159849855
64251 chr12 53412636 53412636 1 + A G PRAD 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGACGATGTGTATAGGGCGCCTCCAATTGGCCGTTCCA < 41bp 1 0.363390411002419 1 0.0577919185161591 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412636 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_31512 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:53412616-53412655
64251 chr12 53412636 53412636 1 + A G PRAD 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGTGTATAGGGCGCCTCCAATTGGCCGTTCCATC < 41bp 1 0.0455271091149186 1 0.0808804333209991 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412636 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_31513 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:53412616-53412655
64251 chr12 132334397 132334397 1 + C T PRAD 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCCGTGCCCCGTCTCCGACTTC < 41bp 1 0.127874745631973 1 0.188537925481796 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334397 nonsynonymous SNV 0.953 4 24 hm5C_associated_SNPs_31515 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr17 41345493 41345493 1 + G A PRAD 41345492 + 41345472 41345512 41 TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGCGTC TGCCCCAGCCTTGGAGGGAACATATACTTCCCATTGGCGTC < 41bp 1 0.202338160582638 1 0.126628667116165 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345492 chr17:41345493 synonymous SNV . 0 22 hm5C_associated_SNPs_31516 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:41345479-41345507
64251 chr11 581559 581559 1 + C T PRAD 581546 + 581526 581566 41 GCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGA GCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCTGGATGGA < 41bp 1 0.602972611905256 1 0.664305806159973 experiment 0.794054776189488 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:581546 chr11:581559 nonsynonymous SNV 0.019 2 34 hm5C_associated_SNPs_31517 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:581511-581566
64251 chr3 52325023 52325023 1 + C T PRAD 52325038 + 52325018 52325058 41 GGGTGCGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG GGGTGTGGAGGACAACCTCCCGGACCGCGATGCGCTGCGGG < 41bp 1 0.580638197645782 1 0.694418668746948 experiment 0.838723604708436 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52325038 chr3:52325023 nonsynonymous SNV 0.830 3 6 hm5C_associated_SNPs_31518 0 0 4 GRWD1 POSTAR2 ENCODE chr3:52324986-52325061
64251 chr1 16046306 16046306 1 + C T PRAD 16046286 + 16046266 16046306 41 ACTACTACAAACCTCAGTACCTGCTGGACTTTGAAGACCGC ACTACTACAAACCTCAGTACCTGCTGGACTTTGAAGACCGT < 41bp 1 0.236680156251987 1 0.250664591789246 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16046286 chr1:16046306 synonymous SNV . 0 41 hm5C_associated_SNPs_31519 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:16046294-16046314
64251 chr5 154174848 154174848 1 + C T PRAD 154174837 + 154174817 154174857 41 ACCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCAC ACCCTTATTGCTTCCTTCCACCGAGTGCAGGTCCTTACCAC < 41bp 1 0.370850626026568 1 0.773802280426025 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174837 chr5:154174848 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_31520 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154174822-154174855
64251 chr5 154174848 154174848 1 + C T PRAD 154174838 + 154174818 154174858 41 CCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCACT CCCTTATTGCTTCCTTCCACCGAGTGCAGGTCCTTACCACT < 41bp 1 0.334479183096067 1 0.882761001586914 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174838 chr5:154174848 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_31521 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154174822-154174855
64251 chr15 69747804 69747804 1 + C T PRAD 69747788 + 69747768 69747808 41 TGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGG TGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCTGAGG < 41bp 1 0.424960039642753 1 0.778047144412994 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747788 chr15:69747804 nonsynonymous SNV 0.967 0 37 hm5C_associated_SNPs_31522 0 0 63 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:69747760-69747820
64251 chr15 69747804 69747804 1 + C T PRAD 69747803 + 69747783 69747823 41 GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA GGAAGCAAAGAAAGAAGAATCTGAGGAGTCTGATGATGACA < 41bp 1 0.592048908581764 1 0.506523072719574 experiment 0.815902182836472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747803 chr15:69747804 nonsynonymous SNV 0.967 0 22 hm5C_associated_SNPs_31523 0 0 63 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:69747760-69747820
64251 chr15 69747804 69747804 1 + C T PRAD 69747822 + 69747802 69747842 41 TCCGAGGAGTCTGATGATGACATGGGCTTTGGTCTTTTTGA TCTGAGGAGTCTGATGATGACATGGGCTTTGGTCTTTTTGA < 41bp 1 0.481320693985693 1 0.674788594245911 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747822 chr15:69747804 nonsynonymous SNV 0.967 0 3 hm5C_associated_SNPs_31524 0 0 63 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:69747760-69747820
64251 chr19 36216181 36216181 1 + C T PRAD 36216189 + 36216169 36216209 41 CTCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCT CTCACCTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCT < 41bp 1 0.0135129874915866 1 0.0529113113880157 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216189 chr19:36216181 nonsynonymous SNV 0.967 5 13 hm5C_associated_SNPs_31525 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216181 36216181 1 + C T PRAD 36216190 + 36216170 36216210 41 TCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTG TCACCTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCTG < 41bp 1 0.037980104732309 1 0.112033069133759 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216190 chr19:36216181 nonsynonymous SNV 0.967 5 12 hm5C_associated_SNPs_31526 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216181 36216181 1 + C T PRAD 36216191 + 36216171 36216211 41 CACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGT CACCTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCTGT < 41bp 1 0.102217445335872 1 0.171171188354492 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216191 chr19:36216181 nonsynonymous SNV 0.967 5 11 hm5C_associated_SNPs_31527 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216181 36216181 1 + C T PRAD 36216192 + 36216172 36216212 41 ACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTG ACCTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCTGTG < 41bp 1 0.464004850159276 1 0.692130446434021 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216192 chr19:36216181 nonsynonymous SNV 0.967 5 10 hm5C_associated_SNPs_31528 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216181 36216181 1 + C T PRAD 36216193 + 36216173 36216213 41 CCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGT CCTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGT < 41bp 1 0.108749084107723 1 0.31636369228363 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216193 chr19:36216181 nonsynonymous SNV 0.967 5 9 hm5C_associated_SNPs_31529 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216181 36216181 1 + C T PRAD 36216194 + 36216174 36216214 41 CTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGTG CTCTGTGTCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGTG < 41bp 1 0.33092053818172 1 0.838261485099792 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216194 chr19:36216181 nonsynonymous SNV 0.967 5 8 hm5C_associated_SNPs_31530 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr5 139060706 139060706 1 + G A PRAD 139060711 + 139060691 139060731 41 GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT GCTGTGGCAGGTGCCAAAGCCCTCAATGGCCAGTCCGACTT < 41bp 1 0.512054429580756 1 0.533810615539551 experiment 0.975891140838488 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060711 chr5:139060706 nonsynonymous SNV 0.975 2 16 hm5C_associated_SNPs_31533 0 0 5 FXR2 POSTAR2 ENCODE chr5:139060680-139060721
64251 chr10 104140354 104140354 1 + C T PRAD 104140373 + 104140353 104140393 41 CCCTCGGCCCTCTGGGAGATCACCTGGGAACGCATTGACTG CTCTCGGCCCTCTGGGAGATCACCTGGGAACGCATTGACTG < 41bp 1 0.442665879109932 1 0.12098416686058 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104140373 chr10:104140354 nonsynonymous SNV 0.675 0 2 hm5C_associated_SNPs_31534 0 0 1 PPIG POSTAR2 ENCODE chr10:104140330-104140354
64251 chr14 24909614 24909614 1 - C T PRAD 24909627 - 24909607 24909647 41 TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAA TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGACCACCAA < 41bp 1 0.288556822322821 1 0.419655352830887 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909627 chr14:24909614 nonsynonymous SNV 0.995 3 34 hm5C_associated_SNPs_31535 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr9 80915565 80915565 1 + C T PRAD 80915575 + 80915555 80915595 41 AAGGAGTTGGCATTAGTGTTCTTGGTAAGATTTACTTTTGA AAGGAGTTGGTATTAGTGTTCTTGGTAAGATTTACTTTTGA < 41bp 1 0.411302445769665 1 0.524655163288116 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80915575 chr9:80915565 synonymous SNV . 0 11 hm5C_associated_SNPs_31538 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80915515-80915611
64251 chr16 29848061 29848061 1 + G A PRAD 29848064 + 29848044 29848084 41 CAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC CAGCCCTGCACCTCCGGACTCGGCGGAACTTCCGGGACTTC < 41bp 1 0.779032813838636 1 0.855805337429047 experiment 0.441934372322728 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29848064 chr16:29848061 nonsynonymous SNV 0.956 4 18 hm5C_associated_SNPs_31540 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chr17 73695894 73695894 1 + G A PRAD 73695888 + 73695868 73695908 41 TTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAA TTTTCTGAAAGAGTTCGGAACATGTCACCTGATGAAATCAA < 41bp 1 0.161767879476923 1 0.126861184835434 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695888 chr17:73695894 synonymous SNV . 0 27 hm5C_associated_SNPs_31541 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695894 73695894 1 + G A PRAD 73695893 + 73695873 73695913 41 TGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCC TGAAAGAGTTCGGAACATGTCACCTGATGAAATCAAGATCC < 41bp 1 0.668918765961822 1 0.249758750200272 experiment 0.662162468076355 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695893 chr17:73695894 synonymous SNV . 0 22 hm5C_associated_SNPs_31542 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695894 73695894 1 + G A PRAD 73695896 + 73695876 73695916 41 AAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGC AAGAGTTCGGAACATGTCACCTGATGAAATCAAGATCCCGC < 41bp 1 0.385042477558974 1 0.161513328552246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695896 chr17:73695894 synonymous SNV . 0 19 hm5C_associated_SNPs_31543 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr2 219526232 219526232 1 + A G PRAD 219526252 + 219526232 219526272 41 ACTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGGTGT GCTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGGTGT < 41bp 1 0.792830405340689 1 0.328904688358307 experiment 0.414339189318623 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCS1L ENSG00000074582 CDS Human protein_coding chr2:219526252 chr2:219526232 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_31544 0 0 2 PPIG POSTAR2 ENCODE chr2:219526194-219526244
64251 chr2 216214268 216214268 1 + G A PRAD 216214285 + 216214265 216214305 41 GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA GTGACGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA < 41bp 1 0.726826313715818 1 0.182794332504272 experiment 0.546347372568364 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216214285 chr2:216214268 nonsynonymous SNV 0.902 0 4 hm5C_associated_SNPs_31545 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:216214260-216214280
64251 chr10 75519998 75519998 1 + G T PRAD 75520010 + 75519990 75520030 41 TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC TGGACAGATTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC < 41bp 1 0.233354314833126 1 0.0679931044578552 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520010 chr10:75519998 nonsynonymous SNV 0.992 0 9 hm5C_associated_SNPs_31546 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:75519987-75520008
64251 chr19 18254660 18254660 1 + C T PRAD 18254659 + 18254639 18254679 41 CAGCCCATCTCTCCTGAATACCATCAGCCTGGACACAATGC CAGCCCATCTCTCCTGAATACTATCAGCCTGGACACAATGC < 41bp 1 0.0410119870595199 1 0.0230736136436462 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAST3 ENSG00000099308 CDS Human protein_coding chr19:18254659 chr19:18254660 synonymous SNV . 0 22 hm5C_associated_SNPs_31548 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:18254654-18254676
64251 chr12 56420735 56420735 1 + C T PRAD 56420731 + 56420711 56420751 41 GAGCCTCACTCCCCTGGGGGCATCCGGCTGCCCAATGGCAA GAGCCTCACTCCCCTGGGGGCATCTGGCTGCCCAATGGCAA < 41bp 1 0.152651130695045 1 0.0486019253730774 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56420731 chr12:56420735 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_31549 0 0 1 ZNF622 POSTAR2 ENCODE chr12:56420672-56420760
64251 chr7 114655765 114655765 1 + G T PRAD 114655752 + 114655732 114655772 41 GAAAATGAAGATTGTTGTGTCCACTGTATCCTGGCTTGCTT GAAAATGAAGATTGTTGTGTCCACTGTATCCTGTCTTGCTT < 41bp 1 0.189618304118224 1 0.0642274618148804 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655752 chr7:114655765 nonsynonymous SNV 0.987 3 34 hm5C_associated_SNPs_31550 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr7 114655765 114655765 1 + G T PRAD 114655776 + 114655756 114655796 41 TGTATCCTGGCTTGCTTGTTCTGCGAATTCCTGACCCTTTG TGTATCCTGTCTTGCTTGTTCTGCGAATTCCTGACCCTTTG < 41bp 1 0.767527874271175 1 0.358974456787109 experiment 0.464944251457649 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655776 chr7:114655765 nonsynonymous SNV 0.987 3 10 hm5C_associated_SNPs_31551 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:114655741-114655773
64251 chr20 60701437 60701437 1 + C T PRAD 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTATGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC < 41bp 1 0.683423085340313 1 0.579988420009613 experiment 0.633153829319374 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701437 synonymous SNV . 0 10 hm5C_associated_SNPs_31552 0 0 3 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr19 54969700 54969700 1 + C T PRAD 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAT < 41bp 1 0.111995207928267 1 0.200193285942078 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969700 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_31564 0 0 19 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:54969680-54969720
64251 chr3 38022319 38022319 1 + C T PRAD 38022310 + 38022290 38022330 41 CCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAG CCCTTCTTTGAGGGCCTGAGCCGGGAGGATGACGTGTACAG < 41bp 1 0.716944377131799 1 0.646317183971405 experiment 0.566111245736402 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022310 chr3:38022319 synonymous SNV . 0 30 hm5C_associated_SNPs_31565 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022293-38022327
64251 chr7 157041158 157041158 1 + G A PRAD 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGGACATTCACCACCTCACCTCCCTAGACCCTGAGGTGTA < 41bp 1 0.395594131238139 1 0.559426188468933 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041158 nonsynonymous SNV 0.351 3 19 hm5C_associated_SNPs_31566 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr7:157041120-157041160
64251 chr2 71654016 71654016 1 + G T PRAD 71654019 + 71653999 71654039 41 CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTG CAGTGGCTGAAGAACAATATCTCCTCAAACAGGAACGCTTG < 41bp 1 0.526438904798198 1 0.519667685031891 experiment 0.947122190403603 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654019 chr2:71654016 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_31567 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr11 44092838 44092838 1 + A G PRAD 44092826 + 44092806 44092846 41 GGCATCATTAACTTGGGCACCAGTGAGAACAAACTCTGCTT GGCATCATTAACTTGGGCACCAGTGAGAACAAGCTCTGCTT < 41bp 1 0.382871832759532 1 0.497069954872131 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACCS ENSG00000110455 CDS Human protein_coding chr11:44092826 chr11:44092838 synonymous SNV . 0 33 hm5C_associated_SNPs_31570 0 0 4 BUD13 POSTAR2 ENCODE chr11:44092823-44092866
64251 chr1 36028872 36028872 1 + G T PRAD 36028874 + 36028854 36028894 41 GATCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGT GATCCTGATCAAGGAAGGTGCCCCCTCGCTTCTGTGCAAGT < 41bp 1 0.071213300989679 1 0.095507025718689 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028874 chr1:36028872 synonymous SNV . 0 19 hm5C_associated_SNPs_31571 0 0 1 GRWD1 POSTAR2 ENCODE chr1:36028869-36028984
64251 chr1 36028872 36028872 1 + G T PRAD 36028876 + 36028856 36028896 41 TCCTGATCAAGGAAGGGGCCCCCTCGCTTCTGTGCAAGTAT TCCTGATCAAGGAAGGTGCCCCCTCGCTTCTGTGCAAGTAT < 41bp 1 0.0351310587386012 1 0.0712760388851166 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028876 chr1:36028872 synonymous SNV . 0 17 hm5C_associated_SNPs_31572 0 0 1 GRWD1 POSTAR2 ENCODE chr1:36028869-36028984
64251 chr5 147796680 147796680 1 + A C PRAD 147796689 + 147796669 147796709 41 ACATCCACGACAACAATCACCATCATCCAGATGACTCAGAC ACATCCACGACCACAATCACCATCATCCAGATGACTCAGAC < 41bp 1 0.505709790841905 1 0.0608231723308563 experiment 0.988580418316189 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147796689 chr5:147796680 nonsynonymous SNV 0.999 1 12 hm5C_associated_SNPs_31573 0 0 5 NOP58 POSTAR2 GSE43666,GSM1067861 chr5:147796660-147796680
64251 chr19 45494556 45494556 1 + A G PRAD 45494552 + 45494532 45494572 41 CTCCTGGGCTGCTATGCCGTCTACAGTCTTCTGTACCTGGA CTCCTGGGCTGCTATGCCGTCTACGGTCTTCTGTACCTGGA < 41bp 1 0.65799533645285 1 0.394010186195374 experiment 0.6840093270943 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45494552 chr19:45494556 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_31574 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:45494542-45494568
64251 chr1 154988869 154988869 1 + A G PRAD 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AGGCTTTCGCCAAGGAGGGCCACCTGCAGCGCCACCTCAAA < 41bp 1 0.207403841903405 1 0.310028195381165 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988869 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_31575 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:154988854-154988891
64251 chr5 34925038 34925038 1 + A G PRAD 34925039 + 34925019 34925059 41 TCCAGGGAAGTTTTGGAGGACCAACTTTATATGAAAATCCT TCCAGGGAAGTTTTGGAGGGCCAACTTTATATGAAAATCCT < 41bp 1 0.0768009746157267 1 0.111791163682938 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BRIX1 ENSG00000113460 CDS Human protein_coding chr5:34925039 chr5:34925038 synonymous SNV . 0 20 hm5C_associated_SNPs_31576 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34925011-34925044
64251 chr5 34925038 34925038 1 + A G PRAD 34925040 + 34925020 34925060 41 CCAGGGAAGTTTTGGAGGACCAACTTTATATGAAAATCCTC CCAGGGAAGTTTTGGAGGGCCAACTTTATATGAAAATCCTC < 41bp 1 0.362742886749377 1 0.135796725749969 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BRIX1 ENSG00000113460 CDS Human protein_coding chr5:34925040 chr5:34925038 synonymous SNV . 0 19 hm5C_associated_SNPs_31577 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34925011-34925044
64251 chr19 39899003 39899003 1 + C G PRAD 39899016 + 39898996 39899036 41 TCTCGCCCTCCAGCTCCCCACCACCACCTGGGGACCTTCCA TCTCGCCGTCCAGCTCCCCACCACCACCTGGGGACCTTCCA < 41bp 1 0.14587413710116 1 0.0602598488330841 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899016 chr19:39899003 synonymous SNV . 0 8 hm5C_associated_SNPs_31578 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39898982-39899077
64251 chr7 100861489 100861489 1 + A G PRAD 100861474 + 100861454 100861494 41 CTTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACT CTTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGGAAACT < 41bp 1 0.107983004516651 1 0.122425854206085 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100861474 chr7:100861489 nonsynonymous SNV 0.999 1 36 hm5C_associated_SNPs_31579 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:100861469-100861489
64251 chr7 100861489 100861489 1 + A G PRAD 100861475 + 100861455 100861495 41 TTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGAAAACTT TTCCGACAGTTGTGTTGTGCCAATGGTGGAGAAGGAAACTT < 41bp 1 0.460477901986726 1 0.507867455482483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100861475 chr7:100861489 nonsynonymous SNV 0.999 1 35 hm5C_associated_SNPs_31580 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:100861469-100861489
64251 chr16 2011248 2011248 1 + C G PRAD 2011268 + 2011248 2011288 41 CATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG GATCATGTGCATGTATGAAGCCGAAATGCAGTGGAAGAGGG < 41bp 1 0.651293777200329 1 0.476713448762894 experiment 0.697412445599342 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011268 chr16:2011248 nonsynonymous SNV 0.000 4 1 hm5C_associated_SNPs_31581 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2011235-2011260
64251 chr1 17949669 17949669 1 + C T PRAD 17949656 + 17949636 17949676 41 CCACCGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT CCACCGAGAAGATCGGGGACCTCTTCGTGGCCTTGGTAAGT < 41bp 1 0.125170261550767 1 0.0229838192462921 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17949656 chr1:17949669 nonsynonymous SNV 0.921 4 34 hm5C_associated_SNPs_31582 0 0 1 GRWD1 POSTAR2 ENCODE chr1:17949649-17949670
64251 chr10 103906642 103906642 1 + A G PRAD 103906635 + 103906615 103906655 41 TCCATGTGGGCTCTGGGGACCATGACTATTGTGTCCGGAGC TCCATGTGGGCTCTGGGGACCATGACTGTTGTGTCCGGAGC < 41bp 1 0.405883575505274 1 0.263649374246597 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906635 chr10:103906642 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_31583 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:103906609-103906647
64251 chr19 1434835 1434835 1 + G C PRAD 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGCCCCCCCCGCCGGCGGCAGCGG < 41bp 1 0.325989656308938 1 0.191432923078537 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434835 nonsynonymous SNV 0.982 1 20 hm5C_associated_SNPs_31585 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434835 1434835 1 + G C PRAD 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGCCCCCCCCGCCGGCGGCAGCGGC < 41bp 1 0.425315274709722 1 0.150769174098969 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434835 nonsynonymous SNV 0.982 1 19 hm5C_associated_SNPs_31586 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434835 1434835 1 + G C PRAD 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGCCCCCCCCGCCGGCGGCAGCGGCT < 41bp 1 0.502281230280361 1 0.402179539203644 experiment 0.995437539439279 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434835 nonsynonymous SNV 0.982 1 18 hm5C_associated_SNPs_31587 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434835 1434835 1 + G C PRAD 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGCCCCCCCCGCCGGCGGCAGCGGCTT < 41bp 1 0.758674561875139 1 0.191567361354828 experiment 0.482650876249721 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434835 nonsynonymous SNV 0.982 1 17 hm5C_associated_SNPs_31588 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chrX 129149433 129149433 1 + C T PRAD 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAACCACGGCCTGGGGGCTCCTTTGTTCCAGAGCAGGACC < 41bp 1 0.0388103577449334 1 0.11536905169487 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149433 synonymous SNV . 0 25 hm5C_associated_SNPs_31589 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129149409-129149434
64251 chr11 71209471 71209471 1 + C T PRAD 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GTGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT < 41bp 1 0.182147535377473 1 0.323517173528671 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209471 nonsynonymous SNV 0.050 2 2 hm5C_associated_SNPs_31590 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:71209471-71209472
64251 chr19 17836873 17836873 1 + T A PRAD 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTCGAGCTGCAGGAGCCCCCGACCTCCGGGGGCTTCCT < 41bp 1 0.494495194693459 1 0.350726306438446 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836873 nonsynonymous SNV 0.097 3 14 hm5C_associated_SNPs_31591 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836873 17836873 1 + T A PRAD 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTCGAGCTGCAGGAGCCCCCGACCTCCGGGGGCTTCCTCA < 41bp 1 0.398650872442513 1 0.407583296298981 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836873 nonsynonymous SNV 0.097 3 12 hm5C_associated_SNPs_31592 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr18 48604690 48604690 1 + T A PRAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA ATTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA < 41bp 1 0.477961404653768 1 0.709270358085632 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604690 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_31593 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:48604637-48604693
64251 chr12 49888746 49888746 1 + G T PRAD 49888749 + 49888729 49888769 41 ATGCCAGAGAATTGGAGGATCCCGAGTCTGCCATGCTAGAT ATGCCAGAGAATTGGAGTATCCCGAGTCTGCCATGCTAGAT < 41bp 1 0.783526912668483 1 0.375622570514679 experiment 0.432946174663035 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888749 chr12:49888746 nonsynonymous SNV 0.820 4 18 hm5C_associated_SNPs_31594 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:49888733-49888751
64251 chr15 57565238 57565238 1 + G A PRAD 57565228 + 57565208 57565248 41 GTTGTTACTTTATTTTCTAGCAGTACTAATGAAGATGAGGA GTTGTTACTTTATTTTCTAGCAGTACTAATAAAGATGAGGA < 41bp 1 0.215036811530664 1 0.209349751472473 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57565228 chr15:57565238 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_31595 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr15:57565220-57565240
64251 chr1 25679432 25679432 1 + A G PRAD 25679441 + 25679421 25679461 41 TGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCT TGATTGCATCTGTGTGGATTCTTTTTGGAGGTTATGTTGCT < 41bp 1 0.118398199951695 1 0.0334527492523193 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25679441 chr1:25679432 nonsynonymous SNV 0.999 1 12 hm5C_associated_SNPs_31596 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25679370-25679462
64251 chr6 31937454 31937454 1 + C T PRAD 31937462 + 31937442 31937482 41 ACCTTGCTACGGCGGGACATCGTATTTGCGGCCAGCCTCTA ACCTTGCTACGGTGGGACATCGTATTTGCGGCCAGCCTCTA < 41bp 1 0.313245342546222 1 0.327284455299377 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31937462 chr6:31937454 nonsynonymous SNV 0.898 4 13 hm5C_associated_SNPs_31597 0 0 4 GRWD1 POSTAR2 ENCODE chr6:31937435-31937501
64251 chr1 203819752 203819752 1 + G A PRAD 203819733 + 203819713 203819753 41 TAAGGCAGTGGAGATGCACGCTGCTGTCATTGCCGCTGTGA TAAGGCAGTGGAGATGCACGCTGCTGTCATTGCCGCTGTAA < 41bp 1 0.723670541355944 1 0.294281870126724 experiment 0.552658917288111 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203819733 chr1:203819752 synonymous SNV . 0 40 hm5C_associated_SNPs_31598 0 0 15 FXR2 POSTAR2 GSE39682,GSM977620 chr1:203819728-203819755
64251 chr17 49239114 49239114 1 + G A PRAD 49239099 + 49239079 49239119 41 CTCCACCCAGGAACATTATACATGGCAGTGATTCTGTGGAG CTCCACCCAGGAACATTATACATGGCAGTGATTCTATGGAG < 41bp 1 0.409174602165703 1 0.10829570889473 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239099 chr17:49239114 nonsynonymous SNV 0.994 1 36 hm5C_associated_SNPs_31599 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:49239080-49239120
64251 chr17 49239114 49239114 1 + G A PRAD 49239112 + 49239092 49239132 41 CATTATACATGGCAGTGATTCTGTGGAGAGTGCAGAGAAGG CATTATACATGGCAGTGATTCTATGGAGAGTGCAGAGAAGG < 41bp 1 0.31651587645818 1 0.648480474948883 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239112 chr17:49239114 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_31600 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:49239080-49239120
64251 chr17 49239114 49239114 1 + G A PRAD 49239124 + 49239104 49239144 41 CAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGT CAGTGATTCTATGGAGAGTGCAGAGAAGGAGATCGGCTTGT < 41bp 1 0.430855354941756 1 0.383130490779877 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239124 chr17:49239114 nonsynonymous SNV 0.994 1 11 hm5C_associated_SNPs_31601 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:49239080-49239120
64251 chr12 62688039 62688039 1 + G A PRAD 62688042 + 62688022 62688062 41 ACAAATACCAGATGGGAGATCAAAATGTGTATCCTGGACCC ACAAATACCAGATGGGAAATCAAAATGTGTATCCTGGACCC < 41bp 1 0.777010050860989 1 0.734219133853912 experiment 0.445979898278022 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control USP15 ENSG00000135655 CDS Human protein_coding chr12:62688042 chr12:62688039 nonsynonymous SNV 1.000 0 18 hm5C_associated_SNPs_31603 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:62688004-62688080
64251 chr17 43311099 43311099 1 + G A PRAD 43311084 + 43311064 43311104 41 CTCGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACGTAAGC CTCGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACATAAGC < 41bp 1 0.247955884489114 1 0.39880558848381 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FMNL1 ENSG00000184922 splicing Human protein_coding chr17:43311084 chr17:43311099 . 0.919 0 36 hm5C_associated_SNPs_31604 0 0 1 DDX24 POSTAR2 ENCODE chr17:43311012-43311100
64251 chr7 70252229 70252229 1 + C A PRAD 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCGGCCACAAGGATGGCCCAAGTGTGCAGAACTTTAGCA < 41bp 1 0.275464930126613 1 0.284631431102753 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252229 synonymous SNV . 0 22 hm5C_associated_SNPs_31607 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr16 72134479 72134479 1 + A C PRAD 72134463 + 72134443 72134483 41 GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGT GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCCTTGT < 41bp 1 0.0997167846264716 1 0.0341174006462097 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134463 chr16:72134479 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_31609 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:72134464-72134484
64251 chr19 10812880 10812880 1 + A G PRAD 10812865 + 10812845 10812885 41 GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGAGA GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAGTGAGA < 41bp 1 0.203423366598749 1 0.0628441274166107 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812865 chr19:10812880 nonsynonymous SNV 0.344 0 36 hm5C_associated_SNPs_31610 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:10812860-10812880
64251 chr19 10897283 10897283 1 + G A PRAD 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG GGGAGTCGCTGCCGGCCCTACGTAACAAACTACAGAGCCAG < 41bp 1 0.282248753483155 1 0.200149118900299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897283 nonsynonymous SNV 0.924 1 25 hm5C_associated_SNPs_31613 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10897283-10897305
64251 chr3 47361170 47361170 1 + C T PRAD 47361152 + 47361132 47361172 41 TTTGCCCACAGATTGGGGACCACAAATTCAGTGCCCACCGG TTTGCCCACAGATTGGGGACCACAAATTCAGTGCCCACTGG < 41bp 1 0.491815404006302 1 0.198470503091812 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361152 chr3:47361170 nonsynonymous SNV 0.999 4 39 hm5C_associated_SNPs_31614 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:47361154-47361188
64251 chr5 145641086 145641086 1 + G T PRAD 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGTTGACCCAGAAGCAGCCCTAATCCAA < 41bp 1 0.399296491742642 1 0.403691381216049 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641086 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_31615 0 0 1 IGF2BP1 POSTAR2 ENCODE chr5:145641080-145641192
64251 chr14 35592592 35592592 1 + T C PRAD 35592593 + 35592573 35592613 41 ACCAGCAGAGGTTGTTTTCTCTTAAAACAATGTCTCCACAG ACCAGCAGAGGTTGTTTTCCCTTAAAACAATGTCTCCACAG < 41bp 1 0.593617256190708 1 0.345803499221802 experiment 0.812765487618583 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35592593 chr14:35592592 synonymous SNV . 0 20 hm5C_associated_SNPs_31616 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:35592568-35592606
64251 chr12 14927441 14927441 1 + G A PRAD 14927458 + 14927438 14927478 41 CGAGCAAAGGCCAAATCCCGCTCCTCCCGCGCGGGCCTGCA CGAACAAAGGCCAAATCCCGCTCCTCCCGCGCGGGCCTGCA < 41bp 1 0.587546323347155 1 0.264164924621582 experiment 0.824907353305691 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control H2AFJ ENSG00000246705 CDS Human protein_coding chr12:14927458 chr12:14927441 nonsynonymous SNV 0.940 1 4 hm5C_associated_SNPs_31617 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:14927441-14927442
64251 chr13 113729393 113729393 1 + C T PRAD 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCACTACGCGGTAGACTCCATCTGCCCAAAGTGCCA < 41bp 1 0.673765202102781 1 0.906654357910156 experiment 0.652469595794439 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729393 nonsynonymous SNV 0.567 2 28 hm5C_associated_SNPs_31618 0 0 2 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chr14 56079014 56079014 1 + A G PRAD 56078994 + 56078974 56079014 41 GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGA GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGG < 41bp 1 0.245706468763544 1 0.0898808836936951 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56078994 chr14:56079014 nonsynonymous SNV 0.998 4 41 hm5C_associated_SNPs_31619 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr14:56078976-56079017
64251 chr2 109365426 109365426 1 + A G PRAD 109365446 + 109365426 109365466 41 ATTGTTGAAACTTTTGCCAACAAAAGCGGGCAGTCTGCATT GTTGTTGAAACTTTTGCCAACAAAAGCGGGCAGTCTGCATT < 41bp 1 0.368457219804649 1 0.139296352863312 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109365446 chr2:109365426 nonsynonymous SNV 0.877 0 1 hm5C_associated_SNPs_31621 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:109365399-109365447
64251 chr11 71946489 71946489 1 + C T PRAD 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGTTCTACGG < 41bp 1 0.392425490728133 1 0.0531098544597626 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946489 nonsynonymous SNV 0.997 3 34 hm5C_associated_SNPs_31622 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946489 71946489 1 + C T PRAD 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCACGGAGCGCCTGGGCACCCGTGAGCGGTTCTACGGTG < 41bp 1 0.389750943605497 1 0.0867576003074646 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946489 nonsynonymous SNV 0.997 3 32 hm5C_associated_SNPs_31623 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946489 71946489 1 + C T PRAD 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCACGGAGCGCCTGGGCACCCGTGAGCGGTTCTACGGTGG < 41bp 1 0.159306661126104 1 0.452099949121475 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946489 nonsynonymous SNV 0.997 3 31 hm5C_associated_SNPs_31624 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr11 71946489 71946489 1 + C T PRAD 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCACGGAGCGCCTGGGCACCCGTGAGCGGTTCTACGGTGGG < 41bp 1 0.713432884285237 1 0.521391451358795 experiment 0.573134231429526 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946489 nonsynonymous SNV 0.997 3 30 hm5C_associated_SNPs_31625 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:71946469-71946491
64251 chr1 113238156 113238156 1 + C T PRAD 113238138 + 113238118 113238158 41 CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGTCC < 41bp 1 0.0461662823291348 1 0.0597780644893646 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238138 chr1:113238156 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_31627 0 0 2 DDX24 POSTAR2 ENCODE chr1:113238150-113238174
64251 chr1 113238156 113238156 1 + C T PRAD 113238149 + 113238129 113238169 41 TTCCTAGCTCCATCTACCGCCTCCTGGCCCCCAGCAGGGAC TTCCTAGCTCCATCTACCGCCTCCTGGTCCCCAGCAGGGAC < 41bp 1 0.283665983335751 1 0.190623611211777 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238149 chr1:113238156 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_31628 0 0 2 DDX24 POSTAR2 ENCODE chr1:113238150-113238174
64251 chr16 31122508 31122508 1 + C T PRAD 31122511 + 31122491 31122531 41 CCTATGCCACTGGACTACATCCTGCCGGAGCTGCTCAAGAA CCTATGCCACTGGACTATATCCTGCCGGAGCTGCTCAAGAA < 41bp 1 0.196627495566618 1 0.226367205381393 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BCKDK ENSG00000103507 CDS Human protein_coding chr16:31122511 chr16:31122508 synonymous SNV . 0 18 hm5C_associated_SNPs_31629 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:31122506-31122536
64251 chr17 7160288 7160288 1 + G A PRAD 7160303 + 7160283 7160323 41 ACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCT ACCCTAGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCT < 41bp 1 0.452346413635655 1 0.290283381938934 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160303 chr17:7160288 synonymous SNV . 0 6 hm5C_associated_SNPs_31630 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr17 7160288 7160288 1 + G A PRAD 7160304 + 7160284 7160324 41 CCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTG CCCTAGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTG < 41bp 1 0.701748316712772 1 0.804893374443054 experiment 0.596503366574456 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160304 chr17:7160288 synonymous SNV . 0 5 hm5C_associated_SNPs_31631 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr9 33313653 33313653 1 + C T PRAD 33313662 + 33313642 33313682 41 GTCTTTACAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCA GTCTTTACAGGTACACAGTTCGCTGTGGTCAGGCTGTCTCA < 41bp 1 0.379949489798871 1 0.275588244199753 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33313662 chr9:33313653 nonsynonymous SNV 0.984 4 12 hm5C_associated_SNPs_31632 0 0 2 PPIG POSTAR2 ENCODE chr9:33313650-33313696
64251 chr1 57161715 57161715 1 + A G PRAD 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAGG < 41bp 1 0.15804066685602 1 0.0310839712619781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161715 nonsynonymous SNV 0.992 1 40 hm5C_associated_SNPs_31633 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:57161683-57161721
64251 chr3 182586927 182586927 1 + C T PRAD 182586934 + 182586914 182586954 41 GAGTGTAATTGTTCAGGCACCTTCAGGTAACCAATCTAAAC GAGTGTAATTGTTTAGGCACCTTCAGGTAACCAATCTAAAC < 41bp 1 0.307907545105719 1 0.115853518247604 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP11B ENSG00000058063 CDS Human protein_coding chr3:182586934 chr3:182586927 stopgain 1.000 1 14 hm5C_associated_SNPs_31635 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:182586910-182586939
64251 chr10 7745433 7745433 1 + T A PRAD 7745438 + 7745418 7745458 41 TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA TTTCATCTGCTTCTTACTTTCTGAAGTATCAGGCTTCGAAA < 41bp 1 0.77801366474264 1 0.836457371711731 experiment 0.44397267051472 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7745438 chr10:7745433 nonsynonymous SNV 0.063 0 16 hm5C_associated_SNPs_31638 0 0 1 DDX3X POSTAR2 ENCODE chr10:7745420-7745472
64251 chr1 44446882 44446882 1 + T A PRAD 44446876 + 44446856 44446896 41 GCTGGAGCGCGTCTGCAAGGCTGTGCTCCTTCTCTGCCTGC GCTGGAGCGCGTCTGCAAGGCTGTGCACCTTCTCTGCCTGC < 41bp 1 0.519632707266103 1 0.326735615730286 experiment 0.960734585467795 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446876 chr1:44446882 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_31640 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:44446870-44446905
64251 chr1 16262301 16262301 1 + A G PRAD 16262304 + 16262284 16262324 41 GTACCGACTGCACCCCTATACTGTGCCACGGGATGTGAGGA GTACCGACTGCACCCCTGTACTGTGCCACGGGATGTGAGGA < 41bp 1 0.13261905888875 1 0.169270902872086 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16262304 chr1:16262301 nonsynonymous SNV 0.947 3 18 hm5C_associated_SNPs_31641 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:16262265-16262339
64251 chrX 73046745 73046745 1 - C T PRAD 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AAAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.547861144490483 1 0.630633175373077 experiment 0.904277711019035 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046745 . . 0 2 hm5C_associated_SNPs_31645 0 0 80 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046745 73046745 1 - C T PRAD 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGTCTCAAGGCTTGAGTTAAAAGTCTTAAGA < 41bp 1 0.554165003067369 1 0.236251682043076 experiment 0.891669993865262 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046745 . . 0 30 hm5C_associated_SNPs_31646 0 0 80 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046744 73046744 1 - T C PRAD 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGGAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.589326307127254 1 0.67941677570343 experiment 0.821347385745491 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046744 . . 0 3 hm5C_associated_SNPs_31647 0 0 81 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046744 73046744 1 - T C PRAD 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGTCTCAAGGCTTGAGTTAGGAGTCTTAAGA < 41bp 1 0.507329178498888 1 0.167037963867188 experiment 0.985341643002224 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046744 . . 0 31 hm5C_associated_SNPs_31648 0 0 81 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr8 1851472 1851472 1 + G A PRAD 1851453 + 1851433 1851473 41 CCTGTTGCTTGTAGGACATGCTGAAGAACACCTCCAAAGGC CCTGTTGCTTGTAGGACATGCTGAAGAACACCTCCAAAGAC < 41bp 1 0.700962412996367 1 0.543148577213287 experiment 0.598075174007265 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1851453 chr8:1851472 nonsynonymous SNV 0.257 4 40 hm5C_associated_SNPs_31649 0 0 1 ZNF622 POSTAR2 ENCODE chr8:1851445-1851489
64251 chr3 10191575 10191575 1 + G T PRAD 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ACGAAGATCTGGAATACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.501458884113017 1 0.202087849378586 experiment 0.997082231773966 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191575 nonsynonymous SNV 0.999 5 15 hm5C_associated_SNPs_31650 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr18 74620343 74620343 1 + C T PRAD 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATAGATGACAGCACTGTAGACTAGCAGAGCATGC < 41bp 1 0.437675565083089 1 0.125077873468399 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620343 stopgain 0.858 1 29 hm5C_associated_SNPs_31651 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:74620322-74620347
64251 chr19 3527681 3527681 1 + C G PRAD 3527693 + 3527673 3527713 41 CCAAGATCCCCTTCAAGGTGCTGGACGCGCCCGAGCTGCAG CCAAGATCGCCTTCAAGGTGCTGGACGCGCCCGAGCTGCAG < 41bp 1 0.778014075946549 1 0.3650062084198 experiment 0.443971848106903 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3527693 chr19:3527681 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_31655 0 0 1 DDX24 POSTAR2 ENCODE chr19:3527628-3527681
64251 chr17 17698444 17698444 1 + T C PRAD 17698433 + 17698413 17698453 41 TGCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCGG TGCTCCAGACCCCACTACAGCAGCTTTTGACCGTTTCCCGG < 41bp 1 0.344580285696753 1 0.347986042499542 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698433 chr17:17698444 nonsynonymous SNV 0.982 4 32 hm5C_associated_SNPs_31658 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:17698435-17698468
64251 chr19 803588 803588 1 + T C PRAD 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTC < 41bp 1 0.459783628663553 1 0.294523358345032 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803588 nonsynonymous SNV 0.012 2 41 hm5C_associated_SNPs_31659 0 0 35 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr7 148873589 148873589 1 + T C PRAD 148873590 + 148873570 148873610 41 TTCAACATCAGATATTCTGTCTTGGATTAAACAAGAAGAAG TTCAACATCAGATATTCTGCCTTGGATTAAACAAGAAGAAG < 41bp 1 0.281164258285507 1 0.0494051873683929 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148873590 chr7:148873589 nonsynonymous SNV 0.999 3 20 hm5C_associated_SNPs_31663 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:148873580-148873600
64251 chr1 24083516 24083516 1 + G T PRAD 24083522 + 24083502 24083542 41 TTAACCCCAGCCCTGAGGAGCCGGCCTATGATGGCCCAAGC TTAACCCCAGCCCTTAGGAGCCGGCCTATGATGGCCCAAGC < 41bp 1 0.22771809075035 1 0.631844282150269 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ELOA ENSG00000011007 CDS Human protein_coding chr1:24083522 chr1:24083516 stopgain 0.138 0 15 hm5C_associated_SNPs_31665 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:24083480-24083516
64251 chr2 162091959 162091959 1 + T C PRAD 162091953 + 162091933 162091973 41 AGTATGTGAATTCTGTCAAGCAGTTTTCCCACCATCCATTA AGTATGTGAATTCTGTCAAGCAGTTTCCCCACCATCCATTA < 41bp 1 0.432936003257085 1 0.0625622570514679 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TANK ENSG00000136560 CDS Human protein_coding chr2:162091953 chr2:162091959 nonsynonymous SNV 0.999 2 27 hm5C_associated_SNPs_31666 0 0 7 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:162091940-162091960
64251 chr7 65419190 65419190 1 + C T PRAD 65419170 + 65419150 65419190 41 TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAT < 41bp 1 0.753696174323228 1 0.828818440437317 experiment 0.492607651353544 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419170 chr7:65419190 nonsynonymous SNV 0.828 5 41 hm5C_associated_SNPs_31667 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:65419150-65419210
64251 chr1 109772145 109772145 1 + G A PRAD 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCAAGAG < 41bp 1 0.547216587583377 1 0.362443327903748 experiment 0.905566824833246 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772145 nonsynonymous SNV 0.968 2 37 hm5C_associated_SNPs_31668 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr7 150773114 150773114 1 + T C PRAD 150773103 + 150773083 150773123 41 CTGTCTCCGCCCCCCAGGTCCGGACCCTCCGTATGCACCTG CTGTCTCCGCCCCCCAGGTCCGGACCCTCCGCATGCACCTG < 41bp 1 0.261647352260614 1 0.186893105506897 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773103 chr7:150773114 synonymous SNV . 0 32 hm5C_associated_SNPs_31680 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:150773097-150773123
64251 chr2 209190015 209190015 1 + T G PRAD 209190000 + 209189980 209190020 41 GTTTTTGTTTGTAGAACAAACCAAGACACTGATGTTTTTTG GTTTTTGTTTGTAGAACAAACCAAGACACTGATGTGTTTTG < 41bp 1 0.10896670097976 1 0.179553985595703 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190000 chr2:209190015 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_31682 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:209190000-209190020
64251 chr15 67073658 67073658 1 + G T PRAD 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGCGCCCGGCGGCCGCGCCCTGTTCGTGCGCAAGGT < 41bp 1 0.440511791696464 1 0.481967628002167 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073658 nonsynonymous SNV 0.998 3 28 hm5C_associated_SNPs_31683 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:67073658-67073659
64251 chr12 62777707 62777707 1 + A C PRAD 62777692 + 62777672 62777712 41 TGTCAAGAACTGTTAGCTTTCCTATTAGATGGATTACATGA TGTCAAGAACTGTTAGCTTTCCTATTAGATGGATTCCATGA < 41bp 1 0.0898466441595531 1 0.326505094766617 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP15 ENSG00000135655 CDS Human protein_coding chr12:62777692 chr12:62777707 nonsynonymous SNV 0.995 4 36 hm5C_associated_SNPs_31685 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:62777694-62777728
64251 chr16 56659784 56659784 1 + C T PRAD 56659789 + 56659769 56659809 41 CCCCAACTGCTCTTGCGCCACTGGTAAGGGAAGCTCTGCGC CCCCAACTGCTCTTGTGCCACTGGTAAGGGAAGCTCTGCGC < 41bp 1 0.674461862523839 1 0.353311866521835 experiment 0.651076274952322 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56659789 chr16:56659784 synonymous SNV . 0 16 hm5C_associated_SNPs_31686 0 0 8 DDX3X POSTAR2 ENCODE chr16:56659709-56659789
64251 chr8 145150822 145150822 1 + G A PRAD 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGCAGGGGGTGCAGGGCTGGCCATGGCTCTGCATTCGGCTG < 41bp 1 0.43696823695928 1 0.419718772172928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150822 synonymous SNV . 0 13 hm5C_associated_SNPs_31687 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145150800-145150824
64251 chr17 37676290 37676290 1 + A G PRAD 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTGCA < 41bp 1 0.198131568957481 1 0.15754646062851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676290 synonymous SNV . 0 39 hm5C_associated_SNPs_31688 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr15 67073650 67073650 1 + G A PRAD 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGCGCCCGGCGGCCACGCCCTGGTCGTGCGCAAGGT < 41bp 1 0.514622064326605 1 0.486501455307007 experiment 0.97075587134679 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073650 nonsynonymous SNV 0.996 5 20 hm5C_associated_SNPs_31689 0 0 3 METAP2 POSTAR2 ENCODE chr15:67073613-67073666
64251 chr10 106019439 106019439 1 + C G PRAD 106019431 + 106019411 106019451 41 TTCTGGAAAACAGTCAGGGTCAGCTGATCTACGAGTCTGCC TTCTGGAAAACAGTCAGGGTCAGCTGATGTACGAGTCTGCC < 41bp 1 0.546492058543248 1 0.332148283720016 experiment 0.907015882913504 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106019431 chr10:106019439 nonsynonymous SNV 0.481 4 29 hm5C_associated_SNPs_31690 0 0 5 GRWD1 POSTAR2 ENCODE chr10:106019437-106019552
64251 chr10 127512145 127512145 1 + C G PRAD 127512131 + 127512111 127512151 41 CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGCGGCGTG CAGTGTGAGCGGCAACATGGCGTCCAGGTCTAAGGGGCGTG < 41bp 1 0.334197875652848 1 0.163662910461426 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCCIP ENSG00000107949 CDS Human protein_coding chr10:127512131 chr10:127512145 nonsynonymous SNV 0.003 2 35 hm5C_associated_SNPs_31691 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:127512140-127512160
64251 chr2 75081432 75081432 1 + C A PRAD 75081425 + 75081405 75081445 41 TTCCTCCTTTTTCAGGTTGACCAGTATCTCTACCACATGCG TTCCTCCTTTTTCAGGTTGACCAGTATATCTACCACATGCG < 41bp 1 0.0871536433483426 1 0.0739268660545349 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK2 ENSG00000159399 CDS Human protein_coding chr2:75081425 chr2:75081432 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_31692 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:75081422-75081443
64251 chr1 24020353 24020353 1 + T C PRAD 24020369 + 24020349 24020389 41 CCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGG CCACCGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGG < 41bp 1 0.13394977560315 1 0.469079107046127 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020369 chr1:24020353 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_31695 0 0 48 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24020280-24020360
64251 chr1 24020353 24020353 1 + T C PRAD 24020370 + 24020350 24020390 41 CACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGA CACCGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGA < 41bp 1 0.588124215118248 1 0.40295347571373 experiment 0.823751569763504 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020370 chr1:24020353 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_31696 0 0 48 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24020280-24020360
64251 chr17 37814071 37814071 1 + C T PRAD 37814079 + 37814059 37814099 41 TCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTG TCCTAGGCTATGTCGTGCTGCGGCTCCGGCACTGGTGGGTG < 41bp 1 0.433603179573278 1 0.241837352514267 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814079 chr17:37814071 nonsynonymous SNV 0.891 4 13 hm5C_associated_SNPs_31697 0 0 4 DDX24 POSTAR2 ENCODE chr17:37814031-37814105
64251 chr5 122161782 122161782 1 + G A PRAD 122161793 + 122161773 122161813 41 GGCAGAAATGGGAAGATGCTCAAATTACTTTGCTCAAAAAA GGCAGAAATAGGAAGATGCTCAAATTACTTTGCTCAAAAAA < 41bp 1 0.33811078867651 1 0.276487290859222 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX2 ENSG00000205302 CDS Human protein_coding chr5:122161793 chr5:122161782 stopgain 1.000 1 10 hm5C_associated_SNPs_31699 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:122161744-122161854
64251 chr9 131107632 131107632 1 + C G PRAD 131107631 + 131107611 131107651 41 TGTAGCCAACTTCCTGCAGGCCCGGGGCCTGGCCTCGGGCG TGTAGCCAACTTCCTGCAGGCGCGGGGCCTGGCCTCGGGCG < 41bp 1 0.788149125493683 1 0.78675103187561 experiment 0.423701749012635 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107631 chr9:131107632 synonymous SNV . 0 22 hm5C_associated_SNPs_31700 0 0 1 DDX3X POSTAR2 ENCODE chr9:131107613-131107666
64251 chr15 101169708 101169708 1 + G A PRAD 101169701 + 101169681 101169721 41 CTCTTCACTATGCAGCCATGCATGGCCGGGCCCGCATTGCA CTCTTCACTATGCAGCCATGCATGGCCAGGCCCGCATTGCA < 41bp 1 0.361680141048878 1 0.0549403727054596 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169701 chr15:101169708 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_31701 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:101169702-101169736
64251 chr17 900393 900393 1 + C G PRAD 900378 + 900358 900398 41 GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGGCGCCC < 41bp 1 0.519417176417593 1 0.382535368204117 experiment 0.961165647164813 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900378 chr17:900393 nonsynonymous SNV 0.014 0 36 hm5C_associated_SNPs_31702 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:900380-900400
64251 chr3 37367122 37367122 1 + A G PRAD 37367140 + 37367120 37367160 41 CTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAG CTGGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAG < 41bp 1 0.273360705392476 1 0.158168792724609 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367140 chr3:37367122 nonsynonymous SNV 0.984 3 3 hm5C_associated_SNPs_31704 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37367085-37367143
64251 chr3 37367122 37367122 1 + A G PRAD 37367142 + 37367122 37367162 41 AGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGA GGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGA < 41bp 1 0.0512969095769316 1 0.166294187307358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367142 chr3:37367122 nonsynonymous SNV 0.984 3 1 hm5C_associated_SNPs_31705 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37367085-37367143
64251 chr9 135926319 135926319 1 + T C PRAD 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGCCTGC < 41bp 1 0.537904532125259 1 0.391039133071899 experiment 0.924190935749482 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926303 chr9:135926319 nonsynonymous SNV 0.093 0 37 hm5C_associated_SNPs_31706 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr9:135926316-135926336
64251 chr1 17953976 17953976 1 + G T PRAD 17953983 + 17953963 17954003 41 ACCAAGAGCGTCAGTGACCGCAGCAGCCTCAACAAGGTGAG ACCAAGAGCGTCATTGACCGCAGCAGCCTCAACAAGGTGAG < 41bp 1 0.782460500585135 1 0.419499576091766 experiment 0.435078998829731 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17953983 chr1:17953976 nonsynonymous SNV 0.944 4 14 hm5C_associated_SNPs_31707 0 0 7 BUD13 POSTAR2 ENCODE chr1:17953968-17953998
64251 chr7 150773232 150773232 1 + G A PRAD 150773215 + 150773195 150773235 41 CCCCTTCATCCTCATCCTCACAGTGCCGCTCCGCATGGTGG CCCCTTCATCCTCATCCTCACAGTGCCGCTCCGCATGATGG < 41bp 1 0.195154368337772 1 0.0780059397220612 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773215 chr7:150773232 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_31709 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150773197-150773235
64251 chr7 150773232 150773232 1 + G A PRAD 150773220 + 150773200 150773240 41 TCATCCTCATCCTCACAGTGCCGCTCCGCATGGTGGTGCTC TCATCCTCATCCTCACAGTGCCGCTCCGCATGATGGTGCTC < 41bp 1 0.0502533550566948 1 0.0398400127887726 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773220 chr7:150773232 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_31710 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150773197-150773235
64251 chr14 60591549 60591549 1 + A G PRAD 60591543 + 60591523 60591563 41 AGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG AGTTCTATTAGGATACCCTGCTGTTGGCAAAGGAAAACAAG < 41bp 1 0.184604299620908 1 0.115707397460938 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591543 chr14:60591549 nonsynonymous SNV 0.997 2 27 hm5C_associated_SNPs_31711 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:60591517-60591550
64251 chr10 106014945 106014945 1 + C G PRAD 106014932 + 106014912 106014952 41 CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCGGAGGGC CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCGGGAGGGC < 41bp 1 0.754850468324987 1 0.871753215789795 experiment 0.490299063350027 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106014932 chr10:106014945 nonsynonymous SNV 0.348 4 34 hm5C_associated_SNPs_31712 0 0 18 FUS POSTAR2 DRA001158,DRS012384 chr10:106014940-106014997
64251 chr20 37144919 37144919 1 + G A PRAD 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC ACAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC < 41bp 1 0.124098810451316 1 0.142126381397247 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144919 synonymous SNV . 0 1 hm5C_associated_SNPs_31713 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:37144887-37144923
64251 chr20 34458923 34458923 1 + A G PRAD 34458925 + 34458905 34458945 41 AAACACTGACAAAGACTTATCGAGGAGACGTTCCTCCAGGC AAACACTGACAAAGACTTGTCGAGGAGACGTTCCTCCAGGC < 41bp 1 0.729455516913988 1 0.938445389270782 experiment 0.541088966172023 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF20 ENSG00000025293 CDS Human protein_coding chr20:34458925 chr20:34458923 synonymous SNV . 0 19 hm5C_associated_SNPs_31715 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34458904-34458931
64251 chr12 27835611 27835611 1 + G T PRAD 27835622 + 27835602 27835642 41 GGGTTGATGGTCGAATGCTACATTACATGACTGTTGTAAGT GGGTTGATGTTCGAATGCTACATTACATGACTGTTGTAAGT < 41bp 1 0.202292637077619 1 0.112459033727646 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27835622 chr12:27835611 nonsynonymous SNV 0.991 3 10 hm5C_associated_SNPs_31716 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27835580-27835611
64251 chr6 107824969 107824969 1 + G A PRAD 107824953 + 107824933 107824973 41 GAGGATATTGAATTCAGGAGCTACCCTACAGATGGGGAGAG GAGGATATTGAATTCAGGAGCTACCCTACAGATGGGAAGAG < 41bp 1 0.111093024561189 1 0.127942502498627 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOBP ENSG00000112320 CDS Human protein_coding chr6:107824953 chr6:107824969 nonsynonymous SNV 0.997 4 37 hm5C_associated_SNPs_31717 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:107824905-107824975
64251 chr6 107824969 107824969 1 + G A PRAD 107824957 + 107824937 107824977 41 ATATTGAATTCAGGAGCTACCCTACAGATGGGGAGAGCCGG ATATTGAATTCAGGAGCTACCCTACAGATGGGAAGAGCCGG < 41bp 1 0.0167922465000783 1 0.159766227006912 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOBP ENSG00000112320 CDS Human protein_coding chr6:107824957 chr6:107824969 nonsynonymous SNV 0.997 4 33 hm5C_associated_SNPs_31718 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:107824905-107824975
64251 chr6 107824969 107824969 1 + G A PRAD 107824958 + 107824938 107824978 41 TATTGAATTCAGGAGCTACCCTACAGATGGGGAGAGCCGGC TATTGAATTCAGGAGCTACCCTACAGATGGGAAGAGCCGGC < 41bp 1 0.638382830118621 1 0.428458392620087 experiment 0.723234339762758 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOBP ENSG00000112320 CDS Human protein_coding chr6:107824958 chr6:107824969 nonsynonymous SNV 0.997 4 32 hm5C_associated_SNPs_31719 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:107824905-107824975
64251 chr11 118498113 118498113 1 + T C PRAD 118498128 + 118498108 118498148 41 TGAGCTCTATTGAGAAGGACCTGCAAGAGATCATGGACTCA TGAGCCCTATTGAGAAGGACCTGCAAGAGATCATGGACTCA < 41bp 1 0.54811087550635 1 0.13400200009346 experiment 0.903778248987299 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118498128 chr11:118498113 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_31721 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:118498099-118498129
64251 chr12 62777656 62777656 1 + A G PRAD 62777675 + 62777655 62777695 41 GATATCAGCAGCAAGACTGTCAAGAACTGTTAGCTTTCCTA GGTATCAGCAGCAAGACTGTCAAGAACTGTTAGCTTTCCTA < 41bp 1 0.731181964813398 1 0.84530508518219 experiment 0.537636070373204 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP15 ENSG00000135655 CDS Human protein_coding chr12:62777675 chr12:62777656 synonymous SNV . 0 2 hm5C_associated_SNPs_31722 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:62777637-62777665
64251 chr7 4824597 4824597 1 + C T PRAD 4824600 + 4824580 4824620 41 TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA TCCGCCACCTCCTCTGCTGGCCGCCTGCTGCCGCCCCGGGA < 41bp 1 0.172975775114733 1 0.238365769386292 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824600 chr7:4824597 synonymous SNV . 0 18 hm5C_associated_SNPs_31723 1 0 3 BUD13 POSTAR2 ENCODE chr7:4824538-4824608
64251 chr7 4824597 4824597 1 + C T PRAD 4824610 + 4824590 4824630 41 CCTCTGCCGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG CCTCTGCTGGCCGCCTGCTGCCGCCCCGGGAGCGGCTTCGG < 41bp 1 0.195175405701816 1 0.259042203426361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824610 chr7:4824597 synonymous SNV . 0 8 hm5C_associated_SNPs_31724 1 0 3 BUD13 POSTAR2 ENCODE chr7:4824538-4824608
64251 chr17 46128887 46128887 1 + C A PRAD 46128901 + 46128881 46128921 41 CAGGCCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAG CAGGCCAAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAG < 41bp 1 0.715164926148827 1 0.485793054103851 experiment 0.569670147702345 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128901 chr17:46128887 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_31725 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr5 139060727 139060727 1 + G T PRAD 139060711 + 139060691 139060731 41 GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCTACTT < 41bp 1 0.485109140688323 1 0.225125879049301 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060711 chr5:139060727 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_31726 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr5:139060715-139060741
64251 chrX 40457949 40457949 1 + T C PRAD 40457957 + 40457937 40457977 41 ACCTGCTCTTTCTTTCTGAACTGCAAGTGCTACATGATATT ACCTGCTCTTTCCTTCTGAACTGCAAGTGCTACATGATATT < 41bp 1 0.693023650303049 1 0.0283918380737305 experiment 0.613952699393902 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40457957 chrX:40457949 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_31728 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:40457945-40457970
64251 chr16 20792044 20792044 1 + G C PRAD 20792052 + 20792032 20792072 41 GCAGACATGCCAGTGACAGCCACACCTGTGTGAAGACAAAA GCAGACATGCCACTGACAGCCACACCTGTGTGAAGACAAAA < 41bp 1 0.257217992947477 1 0.299314349889755 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACSM3;ERI2 ENSG00000005187;ENSG00000196678 CDS Human other chr16:20792052 chr16:20792044 nonsynonymous SNV 0.951 1 13 hm5C_associated_SNPs_31729 0 0 6 DDX24 POSTAR2 ENCODE chr16:20792036-20792070
64251 chr2 97464910 97464910 1 + C A PRAD 97464916 + 97464896 97464936 41 AGTACTACGCCCGCCATTACCTGTACACCCGAAATAAGCCG AGTACTACGCCCGCAATTACCTGTACACCCGAAATAAGCCG < 41bp 1 0.610505435391008 1 0.799312233924866 experiment 0.778989129217984 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97464916 chr2:97464910 nonsynonymous SNV 0.895 1 15 hm5C_associated_SNPs_31730 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:97464897-97464918
64251 chr12 64173824 64173824 1 + C T PRAD 64173833 + 64173813 64173853 41 TACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCCGGCCGG TACCACGTCTTTTTCGGGCGCCGCCGCCAGGCGCCGGCCGG < 41bp 1 0.39753104110097 1 0.0804232358932495 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173833 chr12:64173824 synonymous SNV . 0 12 hm5C_associated_SNPs_31731 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr12:64173810-64173828
64251 chr10 99517472 99517472 1 + G C PRAD 99517475 + 99517455 99517495 41 GCCCAAGTCCTCCATGGGGGCCACAGGTGAGTGGTGCAGGT GCCCAAGTCCTCCATGGCGGCCACAGGTGAGTGGTGCAGGT < 41bp 1 0.450668860124596 1 0.15926006436348 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99517475 chr10:99517472 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_31732 0 0 2 PPIG POSTAR2 ENCODE chr10:99517448-99517480
64251 chr6 44218061 44218061 1 + G A PRAD 44218068 + 44218048 44218088 41 GGAAATTAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGA GGAAATTAGTGATAATGAGGCAGAGGAAGAGAAAGGTGAGA < 41bp 1 0.404470744950091 1 0.628793239593506 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218068 chr6:44218061 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_31734 0 0 60 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:44218020-44218080
64251 chr2 109365452 109365452 1 + C T PRAD 109365446 + 109365426 109365466 41 ATTGTTGAAACTTTTGCCAACAAAAGCGGGCAGTCTGCATT ATTGTTGAAACTTTTGCCAACAAAAGTGGGCAGTCTGCATT < 41bp 1 0.41975583165593 1 0.173236608505249 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109365446 chr2:109365452 synonymous SNV . 0 27 hm5C_associated_SNPs_31735 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:109365420-109365458
64251 chr15 96875647 96875647 1 + C G PRAD 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGGGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC < 41bp 1 0.574985163529107 1 0.354957580566406 experiment 0.850029672941787 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875647 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_31736 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:96875640-96875660
64251 chr3 14712672 14712672 1 + A G PRAD 14712656 + 14712636 14712676 41 CAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACATGAT CAAGCCCCCACAGTTACTTTCAAAACTCTGGATGACGTGAT < 41bp 1 0.48011238038798 1 0.548837006092072 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712656 chr3:14712672 nonsynonymous SNV 0.978 2 37 hm5C_associated_SNPs_31737 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:14712649-14712677
64251 chr1 222833531 222833531 1 + A G PRAD 222833549 + 222833529 222833569 41 CCAGAATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG CCGGAATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAG < 41bp 1 0.100622357224189 1 0.0977946221828461 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222833549 chr1:222833531 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_31738 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:222833531-222833532
64251 chr2 29148007 29148007 1 + T G PRAD 29147999 + 29147979 29148019 41 TTGTATATGGCAGTTGGTTTCAGCCTACTATTGAGCGAGTG TTGTATATGGCAGTTGGTTTCAGCCTACGATTGAGCGAGTG < 41bp 1 0.72620990510003 1 0.460851609706879 experiment 0.547580189799939 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR43 ENSG00000163811 CDS Human protein_coding chr2:29147999 chr2:29148007 synonymous SNV . 0 29 hm5C_associated_SNPs_31739 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr2:29147995-29148024
64251 chr17 42636061 42636061 1 + C G PRAD 42636043 + 42636023 42636063 41 AAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTACTT AAGAAGGAGGGCTGCACCATCCTCTTCATGATGCTCTAGTT < 41bp 1 0.122409387278879 1 0.122043371200562 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636043 chr17:42636061 stopgain 0.993 1 39 hm5C_associated_SNPs_31740 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:42636060-42636061
64251 chr1 16778446 16778446 1 + T C PRAD 16778447 + 16778427 16778467 41 AAACCTCCACCCTGATCCCTCCCCCTGGGGAGCAGTTGGCT AAACCTCCACCCTGATCCCCCCCCCTGGGGAGCAGTTGGCT < 41bp 1 0.131748114090127 1 0.149364858865738 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778447 chr1:16778446 synonymous SNV . 0 20 hm5C_associated_SNPs_31747 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778446 16778446 1 + T C PRAD 16778448 + 16778428 16778468 41 AACCTCCACCCTGATCCCTCCCCCTGGGGAGCAGTTGGCTG AACCTCCACCCTGATCCCCCCCCCTGGGGAGCAGTTGGCTG < 41bp 1 0.291985023263908 1 0.268131941556931 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778448 chr1:16778446 synonymous SNV . 0 19 hm5C_associated_SNPs_31748 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778446 16778446 1 + T C PRAD 16778449 + 16778429 16778469 41 ACCTCCACCCTGATCCCTCCCCCTGGGGAGCAGTTGGCTGT ACCTCCACCCTGATCCCCCCCCCTGGGGAGCAGTTGGCTGT < 41bp 1 0.326419621627578 1 0.0917003452777863 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778449 chr1:16778446 synonymous SNV . 0 18 hm5C_associated_SNPs_31749 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr1 16778446 16778446 1 + T C PRAD 16778450 + 16778430 16778470 41 CCTCCACCCTGATCCCTCCCCCTGGGGAGCAGTTGGCTGTG CCTCCACCCTGATCCCCCCCCCTGGGGAGCAGTTGGCTGTG < 41bp 1 0.4928043802457 1 0.719074249267578 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16778450 chr1:16778446 synonymous SNV . 0 17 hm5C_associated_SNPs_31750 0 0 1 RPS3 POSTAR2 ENCODE chr1:16778418-16778512
64251 chr22 45958914 45958914 1 + G T PRAD 45958896 + 45958876 45958916 41 CACCAACATCCAAGCGCCCGCGGTGGTTTTCCGCATGGGCC CACCAACATCCAAGCGCCCGCGGTGGTTTTCCGCATGGTCC < 41bp 1 0.41440128733984 1 0.362183451652527 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45958896 chr22:45958914 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_31751 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:45958910-45958934
64251 chr19 1279101 1279101 1 + C T PRAD 1279105 + 1279085 1279125 41 TGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACAT TGACTGTGACTTGTGCTTCTCTCCTGCCCCCGTGGGGACAT < 41bp 1 0.703547245570964 1 0.232059299945831 experiment 0.592905508858072 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1279105 chr19:1279101 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_31753 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1279057-1279114
64251 chr10 103906651 103906651 1 + G A PRAD 103906635 + 103906615 103906655 41 TCCATGTGGGCTCTGGGGACCATGACTATTGTGTCCGGAGC TCCATGTGGGCTCTGGGGACCATGACTATTGTGTCCAGAGC < 41bp 1 0.339866683428004 1 0.180812478065491 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906635 chr10:103906651 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_31754 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr10:103906620-103906652
64251 chr5 76355533 76355533 1 + T A READ 76355513 + 76355493 76355533 41 GAGCTGGAAAACGTAGGGAGCAGGTTGGAAGTGAAGGAACT GAGCTGGAAAACGTAGGGAGCAGGTTGGAAGTGAAGGAACA < 41bp 1 0.452824849020478 1 0.415601134300232 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76355513 chr5:76355533 synonymous SNV . 0 41 hm5C_associated_SNPs_31757 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:76355513-76355540
64251 chr6 151670295 151670295 1 + G A READ 151670287 + 151670267 151670307 41 AAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAG AAGCCACGCAGAAATTTCTCCCCCAGCCAAATCTGGCCAAG < 41bp 1 0.297771516502809 1 0.0984372794628143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670287 chr6:151670295 nonsynonymous SNV 0.005 1 29 hm5C_associated_SNPs_31758 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:151670277-151670305
64251 chr14 103390060 103390060 1 + C T READ 103390064 + 103390044 103390084 41 CCAGCACTGACCCAGGCGGTCTCCAAACTCTGGGTCCCCAA CCAGCACTGACCCAGGTGGTCTCCAAACTCTGGGTCCCCAA < 41bp 1 0.711249890322778 1 0.804961562156677 experiment 0.577500219354445 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AMN ENSG00000166126 CDS Human protein_coding chr14:103390064 chr14:103390060 nonsynonymous SNV 0.043 4 17 hm5C_associated_SNPs_31762 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr14:103390052-103390075
64251 chr6 34950944 34950944 1 + G A READ 34950926 + 34950906 34950946 41 AAAAGATAACCATGGACTGACTGCCCTAGACACTGTTCGGG AAAAGATAACCATGGACTGACTGCCCTAGACACTGTTCAGG < 41bp 1 0.115705130596063 1 0.187910139560699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKS1A ENSG00000064999 CDS Human protein_coding chr6:34950926 chr6:34950944 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_31763 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr6:34950934-34950953
64251 chr15 29346694 29346694 1 + G A READ 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACAGGAACACCGGCGCCTCCCCCTACCG < 41bp 1 0.736630382827832 1 0.190948069095612 experiment 0.526739234344336 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346694 nonsynonymous SNV 0.151 3 16 hm5C_associated_SNPs_31764 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346694 29346694 1 + G A READ 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACAGGAACACCGGCGCCTCCCCCTACCGCCT < 41bp 1 0.654974980538302 1 0.499525427818298 experiment 0.690050038923395 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346694 nonsynonymous SNV 0.151 3 13 hm5C_associated_SNPs_31765 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr3 49720107 49720107 1 + C T READ 49720112 + 49720092 49720132 41 GACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACA GACCTACAGGGCCTGTGTGGCCCGGAACCCCGTGATCAACA < 41bp 1 0.539547901549432 1 0.102864980697632 experiment 0.920904196901137 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49720112 chr3:49720107 synonymous SNV . 0 16 hm5C_associated_SNPs_31766 0 0 2 FMR1 POSTAR2 ENCODE chr3:49720086-49720122
64251 chr9 133327654 133327654 1 + C T READ 133327657 + 133327637 133327677 41 GTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCT GTTCTGGCCTACAGTGGTGGCCTGGACACCTCGTGCATCCT < 41bp 1 0.176008735212178 1 0.154699176549911 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ASS1 ENSG00000130707 CDS Human protein_coding chr9:133327657 chr9:133327654 synonymous SNV . 0 18 hm5C_associated_SNPs_31768 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:133327620-133327660
64251 chr7 149576436 149576436 1 + C T READ 149576429 + 149576409 149576449 41 TGATGTGCTTTTCAGGTGCCCAGCTCTCGGAATGACTGTGG TGATGTGCTTTTCAGGTGCCCAGCTCTTGGAATGACTGTGG < 41bp 1 0.399369684962298 1 0.495193004608154 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149576429 chr7:149576436 synonymous SNV . 0 28 hm5C_associated_SNPs_31769 0 0 9 DGCR8 POSTAR2 GSE39086,GSM955513 chr7:149576420-149576440
64251 chr7 149576536 149576536 1 + G A READ 149576548 + 149576528 149576568 41 CACCCAGAGACCCGGACCCGCAGGGCCTGCCTGGTTCCTGG CACCCAGAAACCCGGACCCGCAGGGCCTGCCTGGTTCCTGG < 41bp 1 0.777952948229793 1 0.773245751857758 experiment 0.444094103540413 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149576548 chr7:149576536 nonsynonymous SNV 0.000 1 9 hm5C_associated_SNPs_31770 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:149576463-149576542
64251 chr1 154303960 154303960 1 + C A READ 154303952 + 154303932 154303972 41 AGCGATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT AGCGATAACCAGGTGAATAACCGCCAGTATCAGGTGCTGAT < 41bp 1 0.167477871107275 1 0.0630052983760834 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154303952 chr1:154303960 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_31771 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:154303943-154303970
64251 chr14 23777226 23777226 1 + G A READ 23777246 + 23777226 23777266 41 GATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGT AATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGT < 41bp 1 0.358086659164356 1 0.219213038682938 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777246 chr14:23777226 nonsynonymous SNV 0.971 0 1 hm5C_associated_SNPs_31774 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:23777213-23777233
64251 chr10 124921871 124921871 1 + G A READ 124921851 + 124921831 124921871 41 ATGCCTTCAAATGTCACAGACTAAAAGAAAATAATATTGAG ATGCCTTCAAATGTCACAGACTAAAAGAAAATAATATTGAA < 41bp 1 0.518800501360798 1 0.445674031972885 experiment 0.962398997278403 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BUB3 ENSG00000154473 CDS Human protein_coding chr10:124921851 chr10:124921871 synonymous SNV . 0 41 hm5C_associated_SNPs_31777 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:124921782-124921914
64251 chr1 19983484 19983484 1 + G T READ 19983500 + 19983480 19983520 41 ATGTGCAGGGCGAGGACGGGCCGGGATCCCAGCCCGGCACC ATGTTCAGGGCGAGGACGGGCCGGGATCCCAGCCCGGCACC < 41bp 1 0.76345130927272 1 0.566119372844696 experiment 0.47309738145456 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MINOS1-NBL1;NBL1 ENSG00000158747;ENSG00000270136 CDS Human other chr1:19983500 chr1:19983484 synonymous SNV . 0 5 hm5C_associated_SNPs_31778 0 0 1 SND1 POSTAR2 ENCODE chr1:19983445-19983540
64251 chr2 37458878 37458878 1 + G A READ 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCTGAGGTCAGGTTTGGGACCGTTGTGTGCCGTGGCGCGCG < 41bp 1 0.658293063146183 1 0.309704899787903 experiment 0.683413873707634 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458878 synonymous SNV . 0 19 hm5C_associated_SNPs_31779 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:37458855-37458884
64251 chr19 4268649 4268649 1 + C T READ 4268640 + 4268620 4268660 41 TGACGCCTGGCGCGTCCTCCCTGAGCCAACTGGGTGCATAC TGACGCCTGGCGCGTCCTCCCTGAGCCAATTGGGTGCATAC < 41bp 1 0.72600166576464 1 0.541285634040833 experiment 0.54799666847072 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4268640 chr19:4268649 synonymous SNV . 0 30 hm5C_associated_SNPs_31780 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:4268629-4268661
64251 chr22 19492944 19492944 1 + G A READ 19492963 + 19492943 19492983 41 CGGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC CAGAACGAGGATGAGGAGAACACACTCTCCGTGGACTGCAC < 41bp 1 0.361729134507725 1 0.092549592256546 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CDC45 ENSG00000093009 CDS Human protein_coding chr22:19492963 chr22:19492944 nonsynonymous SNV 0.346 1 2 hm5C_associated_SNPs_31782 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:19492920-19492944
64251 chr13 26956965 26956965 1 + T G READ 26956984 + 26956964 26957004 41 TTTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA TGTTAGTTATGGGTGAAGGTCCTGAGCGAGGAAGAGTAAAA < 41bp 1 0.230061223968477 1 0.115547716617584 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26956984 chr13:26956965 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_31783 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr13:26956960-26956994
64251 chr1 214794274 214794274 1 + A C READ 214794259 + 214794239 214794279 41 ACAATTCTAGCAGTCCTCATCTTTTGGATCAATTAAAAGCG ACAATTCTAGCAGTCCTCATCTTTTGGATCAATTACAAGCG < 41bp 1 0.0489731303371976 1 0.164264231920242 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214794259 chr1:214794274 nonsynonymous SNV 0.913 3 36 hm5C_associated_SNPs_31797 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:214794251-214794277
64251 chr15 41554986 41554986 1 + G A READ 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTGGATTCATGCAAACTTTGGCTCATTTCCGC < 41bp 1 0.227300285517806 1 0.243649303913116 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41554986 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_31798 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:41554981-41554998
64251 chr7 2472417 2472417 1 + C T READ 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACGGGGCCGCTGCTGCCCACGCCCGGGCCG < 41bp 1 0.729490239439748 1 0.155889540910721 experiment 0.541019521120505 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472417 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_31799 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472417 2472417 1 + C T READ 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCTGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA < 41bp 1 0.482634432213178 1 0.161406397819519 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472417 nonsynonymous SNV 0.003 1 3 hm5C_associated_SNPs_31800 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr16 11066825 11066825 1 + G A READ 11066834 + 11066814 11066854 41 GCACTACATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA GCACTACATCCAAGATAAAACTGCTGTTCCTTACTTCTCCA < 41bp 1 0.328641712601702 1 0.0430912375450134 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11066834 chr16:11066825 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_31801 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:11066817-11066855
64251 chr15 74918211 74918211 1 + G A READ 74918204 + 74918184 74918224 41 ACATGTGCATCGCCTTTGAGCTCCTGGGCAAGAACACCTTT ACATGTGCATCGCCTTTGAGCTCCTGGACAAGAACACCTTT < 41bp 1 0.418174795071676 1 0.193437725305557 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74918204 chr15:74918211 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_31802 0 0 6 DDX24 POSTAR2 ENCODE chr15:74918131-74918282
64251 chr17 57725607 57725607 1 + C T READ 57725620 + 57725600 57725640 41 GCAAAATCGTGTGGTGGGAGCTATGCAGCTATATTCTGTAG GCAAAATTGTGTGGTGGGAGCTATGCAGCTATATTCTGTAG < 41bp 1 0.241992500505467 1 0.0978605151176453 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57725620 chr17:57725607 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_31803 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:57725600-57725620
64251 chr21 46931120 46931120 1 + C T READ 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGATGTCC < 41bp 1 0.0463828499835534 1 0.119751125574112 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931120 synonymous SNV . 0 37 hm5C_associated_SNPs_31804 0 0 6 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr21 46931120 46931120 1 + C T READ 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGATGTCCT < 41bp 1 0.0615491131117629 1 0.0526973307132721 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931120 synonymous SNV . 0 36 hm5C_associated_SNPs_31805 0 0 6 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr16 57144699 57144699 1 + C T READ 57144680 + 57144660 57144700 41 CCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCC CCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCTC < 41bp 1 0.611837527392606 1 0.239770889282227 experiment 0.776324945214789 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144680 chr16:57144699 synonymous SNV . 0 40 hm5C_associated_SNPs_31806 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144681 + 57144661 57144701 41 CACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCC CACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCTCC < 41bp 1 0.230897613513971 1 0.251666396856308 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144681 chr16:57144699 synonymous SNV . 0 39 hm5C_associated_SNPs_31807 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144682 + 57144662 57144702 41 ACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCC ACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCTCCC < 41bp 1 0.334573275030431 1 0.453843355178833 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144682 chr16:57144699 synonymous SNV . 0 38 hm5C_associated_SNPs_31808 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144695 + 57144675 57144715 41 GGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGT GGGTGCCCCAGCAGCGGGGGCAGCTCCCATGGGCCCCCAGT < 41bp 1 0.297171389364345 1 0.412866562604904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144695 chr16:57144699 synonymous SNV . 0 25 hm5C_associated_SNPs_31809 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144698 + 57144678 57144718 41 TGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATT TGCCCCAGCAGCGGGGGCAGCTCCCATGGGCCCCCAGTATT < 41bp 1 0.420223419706179 1 0.746267557144165 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144698 chr16:57144699 synonymous SNV . 0 22 hm5C_associated_SNPs_31810 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144700 + 57144680 57144720 41 CCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGC CCCCAGCAGCGGGGGCAGCTCCCATGGGCCCCCAGTATTGC < 41bp 1 0.392705522940168 1 0.19904625415802 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144700 chr16:57144699 synonymous SNV . 0 20 hm5C_associated_SNPs_31811 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 57144699 57144699 1 + C T READ 57144701 + 57144681 57144721 41 CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCG CCCAGCAGCGGGGGCAGCTCCCATGGGCCCCCAGTATTGCG < 41bp 1 0.265443588429152 1 0.301990866661072 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144701 chr16:57144699 synonymous SNV . 0 19 hm5C_associated_SNPs_31812 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chr16 89645283 89645283 1 + C T READ 89645265 + 89645245 89645285 41 CTGGGTTACGGCCTCCACAGCCAGCCCAAAAGTGGCTTCTG CTGGGTTACGGCCTCCACAGCCAGCCCAAAAGTGGCTTTTG < 41bp 1 0.0740954689089116 1 0.800839006900787 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89645265 chr16:89645283 synonymous SNV . 0 39 hm5C_associated_SNPs_31813 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89645274-89645297
64251 chr7 87005030 87005030 1 + C T READ 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT CAGCATTAACTAGTGAGGAGCGAACTTGATGGGCTAAGGTT < 41bp 1 0.20045284663075 1 0.430434674024582 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005030 stopgain 0.992 0 27 hm5C_associated_SNPs_31815 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr11 126213259 126213259 1 + G A READ 126213246 + 126213226 126213266 41 ATCTGCCATCGCCGGGGCATCAGATCCCTACGCGACCTTAC ATCTGCCATCGCCGGGGCATCAGATCCCTACGCAACCTTAC < 41bp 1 0.405461741140563 1 0.52761447429657 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DCPS ENSG00000110063 CDS Human protein_coding chr11:126213246 chr11:126213259 nonsynonymous SNV 0.111 5 34 hm5C_associated_SNPs_31816 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:126213246-126213284
64251 chr12 113596730 113596730 1 - G A READ 113596717 - 113596697 113596737 41 GCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG GCGCCTTTGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG < 41bp 1 0.340584401956032 1 0.36527293920517 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596717 chr12:113596730 synonymous SNV . 0 8 hm5C_associated_SNPs_31817 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr12 113596730 113596730 1 - G A READ 113596718 - 113596698 113596738 41 GGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT GGCGCCTTTGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT < 41bp 1 0.227577901305433 1 0.475475370883942 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596718 chr12:113596730 synonymous SNV . 0 9 hm5C_associated_SNPs_31818 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr16 90027425 90027425 1 + G A READ 90027406 + 90027386 90027426 41 CCCTGTGTGAGCTCCAAAGTCAGCCACCAAGCTGAATACGA CCCTGTGTGAGCTCCAAAGTCAGCCACCAAGCTGAATACAA < 41bp 1 0.484401292652809 1 0.261037409305573 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90027406 chr16:90027425 nonsynonymous SNV 0.989 2 40 hm5C_associated_SNPs_31819 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:90027396-90027430
64251 chr19 10940849 10940849 1 + C T READ 10940869 + 10940849 10940889 41 CGGCCCCCAGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCT TGGCCCCCAGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCT < 41bp 1 0.235238340519525 1 0.085306316614151 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940869 chr19:10940849 nonsynonymous SNV 0.113 4 1 hm5C_associated_SNPs_31822 0 0 1 METAP2 POSTAR2 ENCODE chr19:10940811-10940871
64251 chr3 183854482 183854482 1 + T C READ 183854500 + 183854480 183854520 41 TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATT TGCCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATT < 41bp 1 0.313164752530989 1 0.250716209411621 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183854500 chr3:183854482 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_31832 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183854443-183854503
64251 chr2 233428977 233428977 1 + T G READ 233428984 + 233428964 233429004 41 AGTTCTGGAGGTTTTATAGCCACATGGTACGTCCTGGGGAC AGTTCTGGAGGTTGTATAGCCACATGGTACGTCCTGGGGAC < 41bp 1 0.775621199692074 1 0.739146709442139 experiment 0.448757600615853 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233428984 chr2:233428977 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_31833 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:233428960-233428980
64251 chr14 103802222 103802222 1 + G A READ 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCGCAGCATGTCAGACCAGTTCTATCGCTACAAGATG < 41bp 1 0.154950045926991 1 0.130377352237701 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802222 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_31834 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr2 85598268 85598268 1 + C T READ 85598251 + 85598231 85598271 41 GAAGGACTGGGCTCGCCGCCCTCCGACACTACCTCTTCGGG GAAGGACTGGGCTCGCCGCCCTCCGACACTACCTCTTTGGG < 41bp 1 0.686964187120862 1 0.712544083595276 experiment 0.626071625758277 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85598251 chr2:85598268 synonymous SNV . 0 38 hm5C_associated_SNPs_31835 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:85598255-85598280
64251 chr17 4859430 4859430 1 + G A READ 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCGGTGACCGAATCAATCCAGGCGTGAG < 41bp 1 0.493032135023554 1 0.219066560268402 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859430 synonymous SNV . 0 28 hm5C_associated_SNPs_31836 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859430 4859430 1 + G A READ 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCGGTGACCGAATCAATCCAGGCGTGAGT < 41bp 1 0.384404905815287 1 0.477937430143356 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859430 synonymous SNV . 0 27 hm5C_associated_SNPs_31837 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr7 133164808 133164808 1 + G A READ 133164812 + 133164792 133164832 41 GTTTCTCTGCAGGTTCGAATCGTCCTCCCATGCCATCAGTA GTTTCTCTGCAGGTTCAAATCGTCCTCCCATGCCATCAGTA < 41bp 1 0.282491534948024 1 0.158703446388245 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164812 chr7:133164808 nonsynonymous SNV 0.974 3 17 hm5C_associated_SNPs_31838 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:133164792-133164813
64251 chr3 138341076 138341076 1 + C T READ 138341068 + 138341048 138341088 41 TGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGG TGGATGTTCAAATTAGTGGGCAAAGAAATATTCTATGTTGG < 41bp 1 0.129837472714824 1 0.355679929256439 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138341068 chr3:138341076 nonsynonymous SNV 0.997 1 29 hm5C_associated_SNPs_31839 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr3:138341038-138341081
64251 chr1 110586383 110586383 1 + C T READ 110586381 + 110586361 110586401 41 GTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG GTCTGGAGGGGGAGACGTTTCCTCTGGAACGGGATGAAGTG < 41bp 1 0.366363492279984 1 0.363503038883209 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586381 chr1:110586383 synonymous SNV . 0 23 hm5C_associated_SNPs_31840 0 0 7 GRWD1 POSTAR2 ENCODE chr1:110586317-110586470
64251 chr15 38773558 38773558 1 + G A READ 38773574 + 38773554 38773594 41 CAACGATTACAATGGCACATCTACTTGCTGCTCGTGAAGAT CAACAATTACAATGGCACATCTACTTGCTGCTCGTGAAGAT < 41bp 1 0.374431147437734 1 0.120952934026718 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM98B ENSG00000171262 CDS Human protein_coding chr15:38773574 chr15:38773558 synonymous SNV . 0 5 hm5C_associated_SNPs_31842 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:38773540-38773605
64251 chr2 207651563 207651563 1 + C T READ 207651570 + 207651550 207651590 41 GATGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGC GATGAATTACTTTTCCCTGGCTCCTTTTAATCAGCTTCTGC < 41bp 1 0.296139274483926 1 0.0605533123016357 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651570 chr2:207651563 nonsynonymous SNV 0.114 4 14 hm5C_associated_SNPs_31843 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr2 207651563 207651563 1 + C T READ 207651572 + 207651552 207651592 41 TGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGCAA TGAATTACTTTTCCCTGGCTCCTTTTAATCAGCTTCTGCAA < 41bp 1 0.0359047789317588 1 0.0136929154396057 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651572 chr2:207651563 nonsynonymous SNV 0.114 4 12 hm5C_associated_SNPs_31844 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr3 58128383 58128383 1 + G A READ 58128382 + 58128362 58128402 41 GCCTTCTGTTTTTAGGTGACCGAAGAGGCCTATGTCCCAGT GCCTTCTGTTTTTAGGTGACCAAAGAGGCCTATGTCCCAGT < 41bp 1 0.140982409044931 1 0.810310482978821 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58128382 chr3:58128383 nonsynonymous SNV 0.987 2 22 hm5C_associated_SNPs_31845 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:58128383-58128384
64251 chr1 109441582 109441582 1 + C A READ 109441598 + 109441578 109441618 41 ATTTCTTGGTGAATTTGAAACTGCCTCGGAATACTACAAGT ATTTATTGGTGAATTTGAAACTGCCTCGGAATACTACAAGT < 41bp 1 0.330912041808025 1 0.252547532320023 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109441598 chr1:109441582 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_31847 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:109441570-109441589
64251 chr10 1042096 1042096 1 + G A READ 1042089 + 1042069 1042109 41 TGATGAAGTATGGCGACTCTCTCTACCGCTGCAAACAGCTG TGATGAAGTATGGCGACTCTCTCTACCACTGCAAACAGCTG < 41bp 1 0.761786119549277 1 0.730729579925537 experiment 0.476427760901446 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1042089 chr10:1042096 nonsynonymous SNV 0.998 4 28 hm5C_associated_SNPs_31848 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:1042047-1042114
64251 chr1 114483810 114483810 1 + G T READ 114483796 + 114483776 114483816 41 CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGT CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTTAAATGT < 41bp 1 0.028408442828966 1 0.163678735494614 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483796 chr1:114483810 stopgain 1.000 1 35 hm5C_associated_SNPs_31850 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:114483785-114483832
64251 chr12 104341158 104341158 1 + G A READ 104341157 + 104341137 104341177 41 ACAGAAGACACAGAGCAAGACGAAGATGAAGAAATGGATGT ACAGAAGACACAGAGCAAGACAAAGATGAAGAAATGGATGT < 41bp 1 0.464708201316654 1 0.210536360740662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104341157 chr12:104341158 nonsynonymous SNV 0.109 0 22 hm5C_associated_SNPs_31853 0 0 56 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:104341080-104341180
64251 chr6 160494390 160494390 1 + C T READ 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTTGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT < 41bp 1 0.376469165399195 1 0.881084203720093 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494390 synonymous SNV . 0 3 hm5C_associated_SNPs_31854 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:160494354-160494400
64251 chr2 131103401 131103401 1 + G A READ 131103398 + 131103378 131103418 41 TTTGGTCCTACTGCCTACTTCACGCTGTGCAATGTGGTCAT TTTGGTCCTACTGCCTACTTCACACTGTGCAATGTGGTCAT < 41bp 1 0.458903394908726 1 0.0457570552825928 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103398 chr2:131103401 synonymous SNV . 0 24 hm5C_associated_SNPs_31855 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:131103382-131103401
64251 chr1 215785252 215785252 1 + G A READ 215785244 + 215785224 215785264 41 CCAACAAACTATTTGTAAGACTCTCATCGACTGGAAAAAGG CCAACAAACTATTTGTAAGACTCTCATCAACTGGAAAAAGG < 41bp 1 0.115528878927463 1 0.0237694084644318 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215785244 chr1:215785252 synonymous SNV . 0 29 hm5C_associated_SNPs_31856 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:215785239-215785259
64251 chr1 233482334 233482334 1 + T C READ 233482335 + 233482315 233482355 41 GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAA GGCCCCCGAAGTGATCAAGCCTTCCTTGTTTTCTAAGGGAA < 41bp 1 0.115157771514135 1 0.0717900395393372 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482335 chr1:233482334 nonsynonymous SNV 0.999 4 20 hm5C_associated_SNPs_31857 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233482327-233482358
64251 chr10 134980981 134980981 1 + C T READ 134980995 + 134980975 134981015 41 TCCATGCGGAGCGTGGCCCACGCCGCCATCTTCCAGAGCCT TCCATGTGGAGCGTGGCCCACGCCGCCATCTTCCAGAGCCT < 41bp 1 0.41781996901294 1 0.148197531700134 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KNDC1 ENSG00000171798 CDS Human protein_coding chr10:134980995 chr10:134980981 nonsynonymous SNV 0.302 2 7 hm5C_associated_SNPs_31860 0 0 1 DGCR8 POSTAR2 ENCODE chr10:134980948-134980998
64251 chr1 32620257 32620257 1 + G A READ 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGAGCTATAAGAACAATGCTCTAAACCCTAAAGAAATGA < 41bp 1 0.343343472165966 1 0.152183324098587 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620257 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_31861 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620257 32620257 1 + G A READ 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGAGCTATAAGAACAATGCTCTAAACCCTAAAGAAATGAGA < 41bp 1 0.283332718850094 1 0.200311243534088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620257 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_31862 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620257 32620257 1 + G A READ 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGCTCTAAACCCTAAAGAAATGAGACGAAG < 41bp 1 0.33501407209936 1 0.166236191987991 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620257 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_31863 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620257 32620257 1 + G A READ 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGCTCTAAACCCTAAAGAAATGAGACGAAGA < 41bp 1 0.12989167466237 1 0.21612286567688 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620257 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_31864 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr22 29533449 29533449 1 + G A READ 29533451 + 29533431 29533471 41 ACCATCCGGGTTCCGGGGGCCTCCCACATCCACTTCAGCTT ACCATCCGGGTTCCGGGGACCTCCCACATCCACTTCAGCTT < 41bp 1 0.266131031435619 1 0.17555969953537 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533451 chr22:29533449 nonsynonymous SNV 0.987 3 19 hm5C_associated_SNPs_31865 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:29533423-29533455
64251 chr2 30756143 30756143 1 + T G READ 30756147 + 30756127 30756167 41 TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT TCAGATTGGAGAAAATGTGCCTCAAAGCGAGTCTCAAAGGT < 41bp 1 0.624163106801504 1 0.596984028816223 experiment 0.751673786396992 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30756147 chr2:30756143 nonsynonymous SNV 0.989 4 17 hm5C_associated_SNPs_31872 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:30756031-30756147
64251 chr4 41648727 41648727 1 + G A READ 41648710 + 41648690 41648730 41 ACCCCAATCCCATGAAATACCTGCGGCAACAGTCACTGCCT ACCCCAATCCCATGAAATACCTGCGGCAACAGTCACTACCT < 41bp 1 0.761520338572398 1 0.30921459197998 experiment 0.476959322855203 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41648710 chr4:41648727 synonymous SNV . 0 38 hm5C_associated_SNPs_31873 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:41648721-41648752
64251 chr19 35741411 35741411 1 + C T READ 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCCCGGCCAGCGTCGACAACCAGCTTAATGCCCAGCTGGCA < 41bp 1 0.562709973566475 1 0.463193297386169 experiment 0.87458005286705 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741411 synonymous SNV . 0 26 hm5C_associated_SNPs_31874 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr19 40718777 40718777 1 + C T READ 40718786 + 40718766 40718806 41 GGACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTG GGACATGGAGCTGCGGTGGGCCCCCAAAGAAGGAAGAACTG < 41bp 1 0.0528484838781993 1 0.109803110361099 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718786 chr19:40718777 nonsynonymous SNV 0.995 4 12 hm5C_associated_SNPs_31876 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718777 40718777 1 + C T READ 40718787 + 40718767 40718807 41 GACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGG GACATGGAGCTGCGGTGGGCCCCCAAAGAAGGAAGAACTGG < 41bp 1 0.211212926997987 1 0.432009905576706 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718787 chr19:40718777 nonsynonymous SNV 0.995 4 11 hm5C_associated_SNPs_31877 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718777 40718777 1 + C T READ 40718788 + 40718768 40718808 41 ACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGT ACATGGAGCTGCGGTGGGCCCCCAAAGAAGGAAGAACTGGT < 41bp 1 0.222262217584794 1 0.613302946090698 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718788 chr19:40718777 nonsynonymous SNV 0.995 4 10 hm5C_associated_SNPs_31878 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718777 40718777 1 + C T READ 40718789 + 40718769 40718809 41 CATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTC CATGGAGCTGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTC < 41bp 1 0.201520149184058 1 0.714258849620819 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718789 chr19:40718777 nonsynonymous SNV 0.995 4 9 hm5C_associated_SNPs_31879 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718777 40718777 1 + C T READ 40718790 + 40718770 40718810 41 ATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG ATGGAGCTGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG < 41bp 1 0.377811346475896 1 0.844381213188171 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718790 chr19:40718777 nonsynonymous SNV 0.995 4 8 hm5C_associated_SNPs_31880 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr6 161510473 161510473 1 + G A READ 161510492 + 161510472 161510512 41 CGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC CAGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC < 41bp 1 0.650873285927368 1 0.450023621320724 experiment 0.698253428145265 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161510492 chr6:161510473 synonymous SNV . 0 2 hm5C_associated_SNPs_31881 0 0 6 FXR2 POSTAR2 ENCODE chr6:161510435-161510479
64251 chr5 66432404 66432404 1 + G T READ 66432398 + 66432378 66432418 41 TTCTTCCTTCTAGATGAGATCAACTGGCCTGAGAAGGATGA TTCTTCCTTCTAGATGAGATCAACTGTCCTGAGAAGGATGA < 41bp 1 0.0983398934970076 1 0.109380751848221 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAST4 ENSG00000069020 CDS Human protein_coding chr5:66432398 chr5:66432404 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_31883 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66432389-66432427
64251 chr10 13233336 13233336 1 + A G READ 13233334 + 13233314 13233354 41 TCCTAAGAAGAAGATTCAAACCACTCTGAGTAATCTGGTTG TCCTAAGAAGAAGATTCAAACCGCTCTGAGTAATCTGGTTG < 41bp 1 0.245947674132083 1 0.0471171140670776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM10 ENSG00000065328 CDS Human protein_coding chr10:13233334 chr10:13233336 nonsynonymous SNV 0.982 2 23 hm5C_associated_SNPs_31884 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:13233291-13233385
64251 chr18 19348680 19348680 1 + A T READ 19348668 + 19348648 19348688 41 AGAGTGGTGCGAGGAGTGGACTGGCAGTGGGAAGATCAAGA AGAGTGGTGCGAGGAGTGGACTGGCAGTGGGATGATCAAGA < 41bp 1 0.636606288996239 1 0.239865213632584 experiment 0.726787422007522 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIB1 ENSG00000101752 CDS Human protein_coding chr18:19348668 chr18:19348680 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_31885 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:19348659-19348688
64251 chr19 3762714 3762714 1 + C T READ 3762698 + 3762678 3762718 41 GCAAGCTGCCCGCAATACGTCATGGCGACCAAACGCCTTTT GCAAGCTGCCCGCAATACGTCATGGCGACCAAACGCTTTTT < 41bp 1 0.59827015931187 1 0.0986934304237366 experiment 0.80345968137626 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762698 chr19:3762714 nonsynonymous SNV 0.005 2 37 hm5C_associated_SNPs_31889 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:3762700-3762720
64251 chr3 9691420 9691420 1 + C T READ 9691405 + 9691385 9691425 41 CAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGCTCTAA CAGTACCGGGCCAAGGATGGCAGCGGGACCGGCGGTTCTAA < 41bp 1 0.714945321919797 1 0.883234143257141 experiment 0.570109356160407 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9691405 chr3:9691420 synonymous SNV . 0 36 hm5C_associated_SNPs_31890 0 0 3 DDX3X POSTAR2 ENCODE chr3:9691344-9691431
64251 chr3 169496569 169496569 1 + G T READ 169496589 + 169496569 169496609 41 GAAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGT TAAATTCATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGT < 41bp 1 0.11393772756384 1 0.0614917576313019 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MYNN ENSG00000085274 CDS Human protein_coding chr3:169496589 chr3:169496569 stopgain 1.000 1 1 hm5C_associated_SNPs_31891 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:169496560-169496580
64251 chr3 47041754 47041754 1 + C T READ 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TTCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC < 41bp 1 0.355399465453429 1 0.652104258537292 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041754 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_31892 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:47041729-47041765
64251 chr11 67378475 67378475 1 + G A READ 67378458 + 67378438 67378478 41 CACCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGGCTG CACCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGACTG < 41bp 1 0.133294648651347 1 0.445529371500015 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378458 chr11:67378475 nonsynonymous SNV 0.997 3 38 hm5C_associated_SNPs_31893 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr11:67378460-67378480
64251 chr11 67378475 67378475 1 + G A READ 67378459 + 67378439 67378479 41 ACCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGGCTGC ACCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGACTGC < 41bp 1 0.227434101102135 1 0.323736548423767 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378459 chr11:67378475 nonsynonymous SNV 0.997 3 37 hm5C_associated_SNPs_31894 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr11:67378460-67378480
64251 chr11 67378475 67378475 1 + G A READ 67378460 + 67378440 67378480 41 CCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGGCTGCC CCAGTTCTCTTCCCATTTCCCTGAAGGAGTGTTTGACTGCC < 41bp 1 0.623225794148238 1 0.8675137758255 experiment 0.753548411703524 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378460 chr11:67378475 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_31895 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr11:67378460-67378480
64251 chr17 27064865 27064865 1 + C T READ 27064861 + 27064841 27064881 41 CCCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCACTGT CCCCCGGGGACCTGTGAGGCCAGCTATCCCACCACCACTGT < 41bp 1 0.485490010150642 1 0.108242005109787 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064861 chr17:27064865 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_31896 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:27064849-27064880
64251 chr11 119045975 119045975 1 + C T READ 119045961 + 119045941 119045981 41 GCTGCCTCTGCGGGCTCTGCCTCTGCTCTTCAACCTGATCA GCTGCCTCTGCGGGCTCTGCCTCTGCTCTTCAACTTGATCA < 41bp 1 0.325791269025556 1 0.284868389368057 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119045961 chr11:119045975 synonymous SNV . 0 35 hm5C_associated_SNPs_31897 0 0 1 PRPF8 POSTAR2 ENCODE chr11:119045962-119046036
64251 chr2 27656146 27656146 1 + G A READ 27656133 + 27656113 27656153 41 CAGTGCAGGCCTGAGTGTTCCTTCCAGCATGTCGGAGGGGG CAGTGCAGGCCTGAGTGTTCCTTCCAGCATGTCAGAGGGGG < 41bp 1 0.294382482175054 1 0.10794061422348 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27656133 chr2:27656146 synonymous SNV . 0 34 hm5C_associated_SNPs_31899 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27656127-27656163
64251 chr1 46827422 46827422 1 + T C READ 46827413 + 46827393 46827433 41 TTCCGAAGGGTTTTCATGGACACATTTTGTTTCTTCTCATC TTCCGAAGGGTTTTCATGGACACATTTTGCTTCTTCTCATC < 41bp 1 0.453053361172527 1 0.0388794541358948 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46827413 chr1:46827422 synonymous SNV . 0 30 hm5C_associated_SNPs_31900 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46827384-46827453
64251 chr12 56504362 56504362 1 + G T READ 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGATAACCACTATTTACAAACGAGACCCCTCTAAACA < 41bp 1 0.303507244903103 1 0.156038284301758 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504362 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_31902 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr21 47786919 47786919 1 + G A READ 47786911 + 47786891 47786931 41 TGTGGAAAAAGGACTCTCTTCACCAAACGATTTTGACTCAA TGTGGAAAAAGGACTCTCTTCACCAAACAATTTTGACTCAA < 41bp 1 0.48886818897173 1 0.793717503547668 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47786911 chr21:47786919 synonymous SNV . 0 29 hm5C_associated_SNPs_31903 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:47786866-47786971
64251 chr10 105172967 105172967 1 + G A READ 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACAGCCTGGACGCCCACTCACCCAACTCTCTTGCC < 41bp 1 0.108813157227193 1 0.0645788908004761 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172967 nonsynonymous SNV 0.002 0 30 hm5C_associated_SNPs_31904 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chrX 205504 205504 1 + C T READ 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGTGCCCTGTCGTGCTGAA < 41bp 1 0.57269343416237 1 0.0922767817974091 experiment 0.854613131675261 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205504 nonsynonymous SNV 0.009 3 25 hm5C_associated_SNPs_31906 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205490-205510
64251 chr17 4720029 4720029 1 + C T READ 4720020 + 4720000 4720040 41 TTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAA TTATCACCAAGGACTGGGTGCAGCTGGACTGGCCTTTCGAA < 41bp 1 0.275208657485837 1 0.176264971494675 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4720020 chr17:4720029 nonsynonymous SNV 0.990 2 30 hm5C_associated_SNPs_31907 0 0 1 PPIG POSTAR2 ENCODE chr17:4720009-4720039
64251 chr22 44330507 44330507 1 + C T READ 44330489 + 44330469 44330509 41 GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTCGA GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTTGA < 41bp 1 0.657131204020224 1 0.625377476215363 experiment 0.685737591959553 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44330489 chr22:44330507 stopgain 0.391 0 39 hm5C_associated_SNPs_31913 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:44330467-44330510
64251 chr11 65062101 65062101 1 + C A READ 65062109 + 65062089 65062129 41 CTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGGTAAGA CTGCTTTTCCACATGGGGGCCGAGGAGATCAGTAGGTAAGA < 41bp 1 0.497343279425625 1 0.719063878059387 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65062109 chr11:65062101 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_31914 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65062081-65062105
64251 chr19 46887100 46887100 1 + G A READ 46887105 + 46887085 46887125 41 CTCCTCAACATATTCGAGCTCAACGGTTTACCCTCGGAGAC CTCCTCAACATATTCAAGCTCAACGGTTTACCCTCGGAGAC < 41bp 1 0.585198487500381 1 0.228063553571701 experiment 0.829603024999239 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46887105 chr19:46887100 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_31916 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:46887068-46887114
64251 chr2 11300652 11300652 1 + G A READ 11300656 + 11300636 11300676 41 CGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT CGCTGACCTACCTGGAATACCCCATCCTCATCGCGCAAGGT < 41bp 1 0.223799655282587 1 0.20813649892807 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300656 chr2:11300652 synonymous SNV . 0 17 hm5C_associated_SNPs_31917 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:11300618-11300659
64251 chr19 806468 806468 1 + C T READ 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGTGG < 41bp 1 0.058145924467699 1 0.0848051309585571 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806468 nonsynonymous SNV 0.002 1 39 hm5C_associated_SNPs_31918 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr19 806468 806468 1 + C T READ 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGTGGC < 41bp 1 0.164238978359416 1 0.0773604214191437 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806468 nonsynonymous SNV 0.002 1 38 hm5C_associated_SNPs_31919 0 0 6 DDX24 POSTAR2 ENCODE chr19:806427-806475
64251 chr6 163984542 163984542 1 + G A READ 163984557 + 163984537 163984577 41 CCTGCGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT CCTGCATACTCCTACGCCAGCTGGCCCTACCATAATGCCTT < 41bp 1 0.388291942835378 1 0.131892293691635 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QKI ENSG00000112531 CDS Human protein_coding chr6:163984557 chr6:163984542 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_31920 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:163984498-163984552
64251 chr17 79990843 79990843 1 + C A READ 79990825 + 79990805 79990845 41 TCCCACCTTTTTCCCAAGGACGTCTTTCTGATCTGCTTCTC TCCCACCTTTTTCCCAAGGACGTCTTTCTGATCTGCTTATC < 41bp 1 0.157017178472107 1 0.0413037240505219 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990825 chr17:79990843 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_31921 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr17:79990820-79990860
64251 chr12 118462802 118462802 1 + G A READ 118462801 + 118462781 118462821 41 GTTCCCCGCCTGGAACATGTCGTGGAAGAAGAGAAGTGAGT GTTCCCCGCCTGGAACATGTCATGGAAGAAGAGAAGTGAGT < 41bp 1 0.689695700664139 1 0.0993531048297882 experiment 0.620608598671721 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RFC5 ENSG00000111445 CDS Human protein_coding chr12:118462801 chr12:118462802 nonsynonymous SNV 0.748 1 22 hm5C_associated_SNPs_31922 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:118462777-118462808
64251 chr11 214322 214322 1 + C T READ 214325 + 214305 214345 41 TATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTG TATGGAGCAGCAGCTCTTCTCGGACCCTGACTCGGACCCTG < 41bp 1 0.563030839507137 1 0.76505571603775 experiment 0.873938320985725 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:214325 chr11:214322 nonsynonymous SNV 0.999 3 18 hm5C_associated_SNPs_31923 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:214315-214349
64251 chr1 145663182 145663182 1 + G A READ 145663167 + 145663147 145663187 41 GGTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTT GGTCTTTACTAGCTTTGGGGCCATTTGGATCACACAATGTT < 41bp 1 0.0220441443782624 1 0.0412339270114899 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663167 chr1:145663182 synonymous SNV . 0 36 hm5C_associated_SNPs_31924 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663164-145663192
64251 chr1 145663182 145663182 1 + G A READ 145663168 + 145663148 145663188 41 GTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTTT GTCTTTACTAGCTTTGGGGCCATTTGGATCACACAATGTTT < 41bp 1 0.0242630493699257 1 0.0626689195632935 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF115 ENSG00000121848 CDS Human other chr1:145663168 chr1:145663182 synonymous SNV . 0 35 hm5C_associated_SNPs_31925 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663164-145663192
64251 chr8 59483459 59483459 1 + T G READ 59483471 + 59483451 59483491 41 AACTGCTTTTTCTGCAAACCCTGCCAATCCAGCAATTTTGT AACTGCTTGTTCTGCAAACCCTGCCAATCCAGCAATTTTGT < 41bp 1 0.476288109354997 1 0.0304456353187561 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SDCBP ENSG00000137575 CDS Human protein_coding chr8:59483471 chr8:59483459 nonsynonymous SNV 0.964 1 9 hm5C_associated_SNPs_31926 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:59483446-59483481
64251 chr17 75494690 75494690 1 + G A READ 75494704 + 75494684 75494724 41 AGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCCAGA AGCAGCACCATGGCCAACGGCATGGAGGAGAAGGAGCCAGA < 41bp 1 0.419143785579974 1 0.226372420787811 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75494704 chr17:75494690 nonsynonymous SNV 0.334 0 7 hm5C_associated_SNPs_31927 0 0 4 CDC40 POSTAR2 ENCODE chr17:75494662-75494695
64251 chr9 131455933 131455933 1 + C T READ 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGACGAAACGTTTGAGTCAAACGCAGAAT < 41bp 1 0.16088944563862 1 0.0806401968002319 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455933 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_31928 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131455914-131455934
64251 chr9 131455933 131455933 1 + C T READ 131455942 + 131455922 131455962 41 GACGAAACGTTCGAGTCAAACGCAGAATAAAGCCAGCAGGA GACGAAACGTTTGAGTCAAACGCAGAATAAAGCCAGCAGGA < 41bp 1 0.75579608677584 1 0.555219411849976 experiment 0.488407826448321 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455942 chr9:131455933 nonsynonymous SNV 0.998 1 12 hm5C_associated_SNPs_31929 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131455914-131455934
64251 chr9 131455947 131455947 1 + A G READ 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGGAT < 41bp 1 0.128668598578335 1 0.129589676856995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455947 nonsynonymous SNV 0.998 1 39 hm5C_associated_SNPs_31930 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr2 235943704 235943704 1 + G A READ 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAAAGGGGACC < 41bp 1 0.222149744840994 1 0.203001111745834 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943704 nonsynonymous SNV 0.995 4 33 hm5C_associated_SNPs_31931 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:235943696-235943719
64251 chr19 17615392 17615392 1 + C T READ 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTTGCATCTGCTCGGGCGCCTTCGCCCT < 41bp 1 0.334033136488903 1 0.0821108818054199 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615392 nonsynonymous SNV 0.285 2 16 hm5C_associated_SNPs_31932 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr2 231327222 231327222 1 + G T READ 231327230 + 231327210 231327250 41 TCTCAGCACCGAGAAGTGAGCCTGGTAAGGAAGTTTGGGAG TCTCAGCACCGATAAGTGAGCCTGGTAAGGAAGTTTGGGAG < 41bp 1 0.393853756792165 1 0.372922480106354 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SP100 ENSG00000067066 CDS Human protein_coding chr2:231327230 chr2:231327222 nonsynonymous SNV 0.000 2 13 hm5C_associated_SNPs_31939 0 0 1 PPIG POSTAR2 ENCODE chr2:231327160-231327262
64251 chr17 20163524 20163524 1 + C G READ 20163528 + 20163508 20163548 41 GGAAAGAAAAGACCCTCTGGCAGCCTTGGCCCGGGAATACG GGAAAGAAAAGACCCTGTGGCAGCCTTGGCCCGGGAATACG < 41bp 1 0.243709505032289 1 0.160536706447601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20163528 chr17:20163524 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_31940 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:20163518-20163539
64251 chr9 131345016 131345016 1 + G A READ 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GCGTCACCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC < 41bp 1 0.126981438347902 1 0.11270147562027 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345016 nonsynonymous SNV 0.991 4 6 hm5C_associated_SNPs_31942 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:131345000-131345020
64251 chr22 42280875 42280875 1 + G T READ 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TCCTGCAGGATCCGCCTGTTCCTATGTACACATGGCGTTGT < 41bp 1 0.100089012737509 1 0.0580759942531586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280875 nonsynonymous SNV 0.963 3 23 hm5C_associated_SNPs_31943 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr22:42280861-42280880
64251 chr14 64445700 64445700 1 + G T READ 64445696 + 64445676 64445716 41 TGGAACATTAAATATGGGAGCAGAGAATCTGTGGAATTATT TGGAACATTAAATATGGGAGCAGATAATCTGTGGAATTATT < 41bp 1 0.0534166451705512 1 0.228497564792633 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64445696 chr14:64445700 stopgain 0.983 0 25 hm5C_associated_SNPs_31946 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr14:64445680-64445700
64251 chr4 6925434 6925434 1 + G A READ 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCAC < 41bp 1 0.0264853418698675 1 0.0222581624984741 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925434 synonymous SNV . 0 40 hm5C_associated_SNPs_31947 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr12 64878186 64878186 1 + C T READ 64878177 + 64878157 64878197 41 GGCGACGCTTAGTCTTAGAACCTGGAAGGCTGGCACAACAT GGCGACGCTTAGTCTTAGAACCTGGAAGGTTGGCACAACAT < 41bp 1 0.311678560896627 1 0.366330921649933 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBK1 ENSG00000183735 CDS Human protein_coding chr12:64878177 chr12:64878186 synonymous SNV . 0 30 hm5C_associated_SNPs_31948 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:64878142-64878202
64251 chr13 61084006 61084006 1 + T A READ 61083991 + 61083971 61084011 41 TAATGGCAACAACTTAGAAGCAGCACTGAACGTACTTCTTA TAATGGCAACAACTTAGAAGCAGCACTGAACGTACATCTTA < 41bp 1 0.754272298376404 1 0.270718812942505 experiment 0.491455403247192 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61083991 chr13:61084006 nonsynonymous SNV 0.986 4 36 hm5C_associated_SNPs_31949 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:61083993-61084015
64251 chr16 24826591 24826591 1 + C T READ 24826598 + 24826578 24826618 41 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG CCACGTGCCAAATTGCCTAACGGCTCTAGCAGTGTTAATTG < 41bp 1 0.406849648736878 1 0.075310617685318 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24826598 chr16:24826591 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_31952 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:24826584-24826609
64251 chr20 368896 368896 1 + G A READ 368903 + 368883 368923 41 GAGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTAC GAGGAGGGCGGGCAGGCCTACCAGGCCCTGCACTGCCCTAC < 41bp 1 0.650734400522732 1 0.722356677055359 experiment 0.698531198954536 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368903 chr20:368896 nonsynonymous SNV 0.002 0 14 hm5C_associated_SNPs_31953 0 0 5 DDX6 POSTAR2 ENCODE chr20:368834-368898
64251 chr20 368896 368896 1 + G A READ 368904 + 368884 368924 41 AGGAGGGCGGGCGGGCCTACCAGGCCCTGCACTGCCCTACA AGGAGGGCGGGCAGGCCTACCAGGCCCTGCACTGCCCTACA < 41bp 1 0.769933730312487 1 0.940690159797668 experiment 0.460132539375026 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368904 chr20:368896 nonsynonymous SNV 0.002 0 13 hm5C_associated_SNPs_31954 0 0 5 DDX6 POSTAR2 ENCODE chr20:368834-368898
64251 chr11 35684870 35684870 1 + G A READ 35684862 + 35684842 35684882 41 CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGG CCACGGCTCCCAGGCCTGGACCCCGCCAACTGACGGAGAGG < 41bp 1 0.361491900554038 1 0.378518462181091 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684862 chr11:35684870 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_31955 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684870 35684870 1 + G A READ 35684863 + 35684843 35684883 41 CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGG CACGGCTCCCAGGCCTGGACCCCGCCAACTGACGGAGAGGG < 41bp 1 0.196237505077877 1 0.26306426525116 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684863 chr11:35684870 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_31956 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684870 35684870 1 + G A READ 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCCCAGGCCTGGACCCCGCCAACTGACGGAGAGGGG < 41bp 1 0.249650088450853 1 0.580608606338501 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684870 nonsynonymous SNV 0.000 0 27 hm5C_associated_SNPs_31957 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684870 35684870 1 + G A READ 35684865 + 35684845 35684885 41 CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGG CGGCTCCCAGGCCTGGACCCCGCCAACTGACGGAGAGGGGG < 41bp 1 0.744915737005475 1 0.838107049465179 experiment 0.510168525989049 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684865 chr11:35684870 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_31958 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr22 43558927 43558927 1 + C T READ 43558925 + 43558905 43558945 41 TACCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTG TACCTGGCCTGGCTGGCCTTCATGACCACACTCAACTACTG < 41bp 1 0.673869802398899 1 0.462502956390381 experiment 0.652260395202203 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558925 chr22:43558927 nonsynonymous SNV 0.028 2 23 hm5C_associated_SNPs_31959 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr2 47233826 47233826 1 + G A READ 47233842 + 47233822 47233862 41 CTTTGGTACCAGGTGGCCCTCTCCATGGTGGCTTGTGGGAA CTTTAGTACCAGGTGGCCCTCTCCATGGTGGCTTGTGGGAA < 41bp 1 0.751248300483914 1 0.973280012607574 experiment 0.497503399032171 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47233842 chr2:47233826 stopgain 1.000 1 5 hm5C_associated_SNPs_31960 0 0 2 PPIG POSTAR2 ENCODE chr2:47233818-47233864
64251 chr2 113260544 113260544 1 + C A READ 113260557 + 113260537 113260577 41 GGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATA GGGTGTGATTCGGACTGCTTCAGAACCATATCATGTTGATA < 41bp 1 0.520886723950539 1 0.702484130859375 experiment 0.958226552098921 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113260557 chr2:113260544 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_31961 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:113260512-113260550
64251 chr7 2686577 2686577 1 + C T READ 2686570 + 2686550 2686590 41 TTCTACTCCTTCTGGCTGTGCTGCCGGCGGCGCAAGAGCGA TTCTACTCCTTCTGGCTGTGCTGCCGGTGGCGCAAGAGCGA < 41bp 1 0.353949127043968 1 0.398040890693665 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686570 chr7:2686577 nonsynonymous SNV 0.994 3 28 hm5C_associated_SNPs_31962 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2686553-2686585
64251 chr4 39757308 39757308 1 + A G READ 39757323 + 39757303 39757343 41 TCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATA TCCTAGTATTAGTTCCGTCACAGGGGCTATTTGTTTGGATA < 41bp 1 0.797499406271081 1 0.758583545684814 experiment 0.405001187457839 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2K ENSG00000078140 CDS Human protein_coding chr4:39757323 chr4:39757308 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_31963 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:39757271-39757308
64251 chr4 39757335 39757335 1 + G A READ 39757323 + 39757303 39757343 41 TCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATA TCCTAATATTAGTTCCGTCACAGGGGCTATTTATTTGGATA < 41bp 1 0.7860341748775 1 0.683497071266174 experiment 0.427931650245 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2K ENSG00000078140 CDS Human protein_coding chr4:39757323 chr4:39757335 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_31964 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:39757288-39757343
64251 chr1 10165584 10165584 1 + T G READ 10165581 + 10165561 10165601 41 GCCTTTCCAACAGTATTCTCCGATTTTAAGGACTTGATTGG GCCTTTCCAACAGTATTCTCCGAGTTTAAGGACTTGATTGG < 41bp 1 0.286369288740764 1 0.308280736207962 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBE4B ENSG00000130939 CDS Human protein_coding chr1:10165581 chr1:10165584 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_31965 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:10165576-10165594
64251 chr16 23578364 23578364 1 + G A READ 23578358 + 23578338 23578378 41 TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC TAAAAAATGTGGTCAGTGAACCTATCAAAGGACATGAAGAC < 41bp 1 0.0694123561572772 1 0.0969356298446655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23578358 chr16:23578364 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_31966 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:23578290-23578386
64251 chr1 46775975 46775975 1 + C T READ 46775983 + 46775963 46776003 41 ACTTCTTGCATGCGAGGGACCATTGCGTAAGTCAGTGGGAA ACTTCTTGCATGTGAGGGACCATTGCGTAAGTCAGTGGGAA < 41bp 1 0.210131060217676 1 0.178663730621338 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UQCRH ENSG00000173660 CDS Human protein_coding chr1:46775983 chr1:46775975 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_31968 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46775871-46775983
64251 chrX 48457274 48457274 1 + G A READ 48457256 + 48457236 48457276 41 GGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCCGAG GGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCCAAG < 41bp 1 0.734101759963307 1 0.333358347415924 experiment 0.531796480073386 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457256 chrX:48457274 nonsynonymous SNV 0.936 1 39 hm5C_associated_SNPs_31969 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chrX 48457274 48457274 1 + G A READ 48457272 + 48457252 48457292 41 CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTG CCAGCGCTACGGGCCCCTCTCCAAGCCAGGCAGTGCTCGTG < 41bp 1 0.545788418084406 1 0.863923907279968 experiment 0.908423163831187 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457272 chrX:48457274 nonsynonymous SNV 0.936 1 23 hm5C_associated_SNPs_31970 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chrX 48457274 48457274 1 + G A READ 48457273 + 48457253 48457293 41 CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGC CAGCGCTACGGGCCCCTCTCCAAGCCAGGCAGTGCTCGTGC < 41bp 1 0.60917703672331 1 0.312469452619553 experiment 0.781645926553379 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457273 chrX:48457274 nonsynonymous SNV 0.936 1 22 hm5C_associated_SNPs_31971 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48457253-48457301
64251 chr1 22838407 22838407 1 + C A READ 22838392 + 22838372 22838412 41 TTCATCTGTAAGGCCTGCGACAAAAGCTTCCATTTCTACTG TTCATCTGTAAGGCCTGCGACAAAAGCTTCCATTTATACTG < 41bp 1 0.419151309617499 1 0.351736485958099 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22838392 chr1:22838407 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_31972 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:22838397-22838425
64251 chr1 203787701 203787701 1 + G A READ 203787706 + 203787686 203787726 41 ATTTGTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGA ATTTGTTTACAGGGTAACAGCTGCCCATTCCGTCACTGTGA < 41bp 1 0.419359804309574 1 0.193411409854889 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787706 chr1:203787701 nonsynonymous SNV 0.997 1 16 hm5C_associated_SNPs_31973 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787701 203787701 1 + G A READ 203787710 + 203787690 203787730 41 GTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCT GTTTACAGGGTAACAGCTGCCCATTCCGTCACTGTGAAGCT < 41bp 1 0.0619782951788501 1 0.0980340838432312 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787710 chr1:203787701 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_31974 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787701 203787701 1 + G A READ 203787711 + 203787691 203787731 41 TTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCTG TTTACAGGGTAACAGCTGCCCATTCCGTCACTGTGAAGCTG < 41bp 1 0.0480330091813197 1 0.0881686806678772 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787711 chr1:203787701 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_31975 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr9 37357108 37357108 1 + C A READ 37357097 + 37357077 37357117 41 TCTCCTGGCAGTTTTAAAACCCAGAAGCCTTCTAAGCCCTT TCTCCTGGCAGTTTTAAAACCCAGAAGCCTTATAAGCCCTT < 41bp 1 0.548123497762826 1 0.444860279560089 experiment 0.903753004474348 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZCCHC7 ENSG00000147905 CDS Human protein_coding chr9:37357097 chr9:37357108 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_31976 0 0 2 SND1 POSTAR2 ENCODE chr9:37357100-37357153
64251 chr9 37357108 37357108 1 + C A READ 37357114 + 37357094 37357134 41 AACCCAGAAGCCTTCTAAGCCCTTTCACCGTTCATCACATT AACCCAGAAGCCTTATAAGCCCTTTCACCGTTCATCACATT < 41bp 1 0.0214151011774225 1 0.0628296434879303 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZCCHC7 ENSG00000147905 CDS Human protein_coding chr9:37357114 chr9:37357108 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_31977 0 0 2 SND1 POSTAR2 ENCODE chr9:37357100-37357153
64251 chr2 220072092 220072092 1 + C T READ 220072099 + 220072079 220072119 41 CAGGCATCTTCTGCGCAGACCATGTGGCCTACGCCCAGCAT CAGGCATCTTCTGTGCAGACCATGTGGCCTACGCCCAGCAT < 41bp 1 0.335474960391293 1 0.291888982057571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072099 chr2:220072092 synonymous SNV . 0 14 hm5C_associated_SNPs_31978 0 0 2 DDX3X POSTAR2 ENCODE chr2:220072076-220072123
64251 chr8 77620171 77620171 1 + G A READ 77620172 + 77620152 77620192 41 TTGAAGTGTATTGCCATTGGCAACCCTGTTCACCTAAAATG TTGAAGTGTATTGCCATTGACAACCCTGTTCACCTAAAATG < 41bp 1 0.0990088284824758 1 0.079472541809082 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77620172 chr8:77620171 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_31979 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:77620156-77620172
64251 chr5 140084144 140084144 1 + G A READ 140084145 + 140084125 140084165 41 TTGAGGAAAGGATGAAGGAGCTCAGAGAAGAGGTAAGGGTC TTGAGGAAAGGATGAAGGAACTCAGAGAAGAGGTAAGGGTC < 41bp 1 0.629433290745679 1 0.490558117628098 experiment 0.741133418508642 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084145 chr5:140084144 synonymous SNV . 0 20 hm5C_associated_SNPs_31980 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr7 148921497 148921497 1 + C T READ 148921485 + 148921465 148921505 41 AGACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGG AGACCTACAGCCGTAAGGAGCACCTGCAGAACTACCAGCGG < 41bp 1 0.332818640086332 1 0.208380341529846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921485 chr7:148921497 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_31981 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921497 148921497 1 + C T READ 148921487 + 148921467 148921507 41 ACCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCT ACCTACAGCCGTAAGGAGCACCTGCAGAACTACCAGCGGCT < 41bp 1 0.0549374594218805 1 0.142211407423019 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921487 chr7:148921497 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_31982 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr7 148921497 148921497 1 + C T READ 148921488 + 148921468 148921508 41 CCTACAGCCGTAAGGAGCACCTGCAGAACCACCAGCGGCTG CCTACAGCCGTAAGGAGCACCTGCAGAACTACCAGCGGCTG < 41bp 1 0.700134497199845 1 0.551336646080017 experiment 0.599731005600311 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921488 chr7:148921497 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_31983 0 0 1 YBX3 POSTAR2 ENCODE chr7:148921467-148921538
64251 chr17 28747895 28747895 1 + G T SARC 28747907 + 28747887 28747927 41 GGCCAACTGTTTTGAGATCACATTAGAACTGTCTTGTTGCA GGCCAACTTTTTTGAGATCACATTAGAACTGTCTTGTTGCA < 41bp 1 0.300240525300903 1 0.0665839910507202 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28747907 chr17:28747895 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_31989 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr17:28747862-28747895
64251 chr22 25019094 25019094 1 + G C SARC 25019089 + 25019069 25019109 41 TGCAGGGGGCATTGTGACAGCTGAGGACCTGAACAACTACC TGCAGGGGGCATTGTGACAGCTGAGCACCTGAACAACTACC < 41bp 1 0.459678303500156 1 0.365133166313171 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GGT1 ENSG00000100031 CDS Human protein_coding chr22:25019089 chr22:25019094 nonsynonymous SNV 0.841 3 26 hm5C_associated_SNPs_31990 0 0 1 SND1 POSTAR2 ENCODE chr22:25019073-25019097
64251 chr5 156816277 156816277 1 + G T SARC 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTTAC < 41bp 1 0.310483750683135 1 0.481935024261475 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816277 synonymous SNV . 0 39 hm5C_associated_SNPs_31991 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr5 73045768 73045768 1 + C T SARC 73045760 + 73045740 73045780 41 GGATCTCATCAGCGACATGTCATGATTGCAGAGCGCATCGA GGATCTCATCAGCGACATGTCATGATTGTAGAGCGCATCGA < 41bp 1 0.720074914995675 1 0.0716180503368378 experiment 0.559850170008651 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73045760 chr5:73045768 nonsynonymous SNV 0.082 2 29 hm5C_associated_SNPs_31992 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr5:73045753-73045774
64251 chr6 168352571 168352571 1 + T A SARC 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA ACCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.188889742164201 1 0.388107359409332 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352571 nonsynonymous SNV 0.524 0 1 hm5C_associated_SNPs_32004 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr11 73021102 73021102 1 + G A SARC 73021096 + 73021076 73021116 41 CCAGATATCGCCTCAGAGACCCTGACGCTTCTCAGTTTCCT CCAGATATCGCCTCAGAGACCCTGACACTTCTCAGTTTCCT < 41bp 1 0.0876512369757646 1 0.0398822426795959 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73021096 chr11:73021102 synonymous SNV . 0 27 hm5C_associated_SNPs_32005 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:73021102-73021103
64251 chr3 183368404 183368404 1 + G T SARC 183368408 + 183368388 183368428 41 GCTGTGCTCTCAGCCTGTAGCAGCTACTTCAGAGCTATGTT GCTGTGCTCTCAGCCTTTAGCAGCTACTTCAGAGCTATGTT < 41bp 1 0.605071403599738 1 0.391048431396484 experiment 0.789857192800524 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368408 chr3:183368404 nonsynonymous SNV 0.969 2 17 hm5C_associated_SNPs_32006 0 0 3 FMR1 POSTAR2 ENCODE chr3:183368395-183368475
64251 chr13 20567831 20567831 1 + G T SARC 20567812 + 20567792 20567832 41 GTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGG GTAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACTG < 41bp 1 0.0832793160918605 1 0.145952522754669 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567812 chr13:20567831 nonsynonymous SNV 0.929 2 40 hm5C_associated_SNPs_32007 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567831 20567831 1 + G T SARC 20567813 + 20567793 20567833 41 TAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACGGG TAAGCTCTGTGAATGATGGCCAATTAGAAAATACTGACTGG < 41bp 1 0.0741214495896795 1 0.14330917596817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567813 chr13:20567831 nonsynonymous SNV 0.929 2 39 hm5C_associated_SNPs_32008 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr13 20567831 20567831 1 + G T SARC 20567826 + 20567806 20567846 41 TGATGGCCAATTAGAAAATACTGACGGGCGAGATATGAACT TGATGGCCAATTAGAAAATACTGACTGGCGAGATATGAACT < 41bp 1 0.133060646837387 1 0.0837624073028564 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567826 chr13:20567831 nonsynonymous SNV 0.929 2 26 hm5C_associated_SNPs_32009 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr1 45479716 45479716 1 + G T SARC 45479707 + 45479687 45479727 41 TCCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTG TCCTCACTGATGCTCTGGTCCCATATCTGTTAGGACAAGTG < 41bp 1 0.236288993671308 1 0.0456165969371796 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479707 chr1:45479716 nonsynonymous SNV 0.996 2 30 hm5C_associated_SNPs_32011 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45479684-45479723
64251 chr1 45479716 45479716 1 + G T SARC 45479708 + 45479688 45479728 41 CCTCACTGATGCTCTGGTCCCATATCTGGTAGGACAAGTGG CCTCACTGATGCTCTGGTCCCATATCTGTTAGGACAAGTGG < 41bp 1 0.250115107004638 1 0.257174015045166 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UROD ENSG00000126088 CDS Human protein_coding chr1:45479708 chr1:45479716 nonsynonymous SNV 0.996 2 29 hm5C_associated_SNPs_32012 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45479684-45479723
64251 chr4 56291555 56291555 1 + G T SARC 56291562 + 56291542 56291582 41 GTGACAATCATAGGAGGCATCGTTTTTTTGGCGTTTGCATT GTGACAATCATAGTAGGCATCGTTTTTTTGGCGTTTGCATT < 41bp 1 0.0890240837740452 1 0.105803906917572 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56291562 chr4:56291555 nonsynonymous SNV 1.000 5 14 hm5C_associated_SNPs_32013 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:56291540-56291560
64251 chr12 52370292 52370292 1 + G T SARC 52370279 + 52370259 52370299 41 GAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCT GAGACTGGACATGGAAGATCCCTCATGTGAGATTTGTCTCT < 41bp 1 0.249924327210651 1 0.489091694355011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52370279 chr12:52370292 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_32016 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:52370274-52370307
64251 chr17 62223815 62223815 1 + A T SARC 62223795 + 62223775 62223815 41 CATAACTGGGGCCGCCTGGCCTCCCGCGGGCGGCCTTTTTA CATAACTGGGGCCGCCTGGCCTCCCGCGGGCGGCCTTTTTT < 41bp 1 0.360577700550316 1 0.744592487812042 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223795 chr17:62223815 . . 0 41 hm5C_associated_SNPs_32023 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223815 62223815 1 + A T SARC 62223805 + 62223785 62223825 41 GCCGCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCG GCCGCCTGGCCTCCCGCGGGCGGCCTTTTTTACCGCGAGCG < 41bp 1 0.307887914137494 1 0.256020784378052 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223805 chr17:62223815 . . 0 31 hm5C_associated_SNPs_32024 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223815 62223815 1 + A T SARC 62223808 + 62223788 62223828 41 GCCTGGCCTCCCGCGGGCGGCCTTTTTAACCGCGAGCGACA GCCTGGCCTCCCGCGGGCGGCCTTTTTTACCGCGAGCGACA < 41bp 1 0.0273651796344092 1 0.034343421459198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223808 chr17:62223815 . . 0 28 hm5C_associated_SNPs_32025 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223815 62223815 1 + A T SARC 62223817 + 62223797 62223837 41 CCCGCGGGCGGCCTTTTTAACCGCGAGCGACAAGAAGTAAC CCCGCGGGCGGCCTTTTTTACCGCGAGCGACAAGAAGTAAC < 41bp 1 0.550957681421666 1 0.258524209260941 experiment 0.898084637156667 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223817 chr17:62223815 . . 0 19 hm5C_associated_SNPs_32026 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr17 62223815 62223815 1 + A T SARC 62223827 + 62223807 62223847 41 GCCTTTTTAACCGCGAGCGACAAGAAGTAACCTGACTGTCC GCCTTTTTTACCGCGAGCGACAAGAAGTAACCTGACTGTCC < 41bp 1 0.665297357548909 1 0.331706672906876 experiment 0.669405284902181 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223827 chr17:62223815 . . 0 9 hm5C_associated_SNPs_32027 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:62223800-62223825
64251 chr8 22064428 22064428 1 + C T SARC 22064413 + 22064393 22064433 41 ACCAGTGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA ACCAGTGGTACCATCACCAGCCCCAACTGGCCTGATAAGTA < 41bp 1 0.175896161513726 1 0.529693901538849 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064413 chr8:22064428 synonymous SNV . 0 36 hm5C_associated_SNPs_32030 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22064416-22064440
64251 chr17 40714724 40714724 1 + G A SARC 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCA < 41bp 1 0.545387121572736 1 0.433656394481659 experiment 0.909225756854528 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714724 synonymous SNV . 0 41 hm5C_associated_SNPs_32031 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr17 57918688 57918688 1 + G T SARC 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGTCTGT < 41bp 1 0.593604173309498 1 0.130799502134323 experiment 0.812791653381004 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918688 . . 0 37 hm5C_associated_SNPs_32032 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr17 57918688 57918688 1 + G T SARC 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG ACTGTTGAATCTCATGGCAACACCAGTCGATGGTCTGTCTG < 41bp 1 0.770990171412522 1 0.266835927963257 experiment 0.458019657174956 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918688 . . 0 34 hm5C_associated_SNPs_32033 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr11 993358 993358 1 + G C SARC 993371 + 993351 993391 41 GAAACTTGATAGCTGGAGACCCGAGATCCAGGTGAGAGGCC GAAACTTCATAGCTGGAGACCCGAGATCCAGGTGAGAGGCC < 41bp 1 0.1934351863576 1 0.543855428695679 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:993371 chr11:993358 nonsynonymous SNV 0.990 4 8 hm5C_associated_SNPs_32034 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:993340-993360
64251 chr11 993375 993375 1 + G C SARC 993371 + 993351 993391 41 GAAACTTGATAGCTGGAGACCCGAGATCCAGGTGAGAGGCC GAAACTTGATAGCTGGAGACCCGACATCCAGGTGAGAGGCC < 41bp 1 0.0863257435265602 1 0.594800889492035 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:993371 chr11:993375 nonsynonymous SNV 0.223 3 25 hm5C_associated_SNPs_32035 0 0 6 BUD13 POSTAR2 ENCODE chr11:993338-993382
64251 chr17 57737919 57737919 1 + G T SARC 57737924 + 57737904 57737944 41 GGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCAC GGGAAATTACTCGGATGCAGCAAAGGTGGCTGCTAATGCAC < 41bp 1 0.440117316568735 1 0.456937342882156 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57737924 chr17:57737919 nonsynonymous SNV 0.997 1 16 hm5C_associated_SNPs_32036 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57737784-57737920
64251 chr11 35006133 35006133 1 + A G SARC 35006117 + 35006097 35006137 41 TTTTCTTTTTCTATTTCTAGCAAATGCCAGATGTTAATGTA TTTTCTTTTTCTATTTCTAGCAAATGCCAGATGTTAGTGTA < 41bp 1 0.146611295567355 1 0.629269957542419 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:35006117 chr11:35006133 nonsynonymous SNV 0.954 4 37 hm5C_associated_SNPs_32037 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:35006132-35006133
64251 chr12 112915797 112915797 1 + C T SARC 112915794 + 112915774 112915814 41 CTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAGAG CTCCCGAGTGATTGTCATGACAATGAAAGAAGTGGAGAGAG < 41bp 1 0.376345404381894 1 0.310958325862885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915794 chr12:112915797 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_32039 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr2 201435917 201435917 1 + A G SARC 201435937 + 201435917 201435957 41 ATAATCTTTCTGCAGACACTCCCTGTGCAACAGTTTTAGAT GTAATCTTTCTGCAGACACTCCCTGTGCAACAGTTTTAGAT < 41bp 1 0.231963316058897 1 0.0636983513832092 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201435937 chr2:201435917 nonsynonymous SNV 0.932 0 1 hm5C_associated_SNPs_32040 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:201435894-201435926
64251 chr12 57624685 57624685 1 + G T SARC 57624668 + 57624648 57624688 41 CCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACAGGCC CCAGACTCAGACTGGGGAAGCAAACAGGGGCTGGACATGCC < 41bp 1 0.373236684850038 1 0.138315886259079 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57624668 chr12:57624685 nonsynonymous SNV 0.981 4 38 hm5C_associated_SNPs_32041 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:57624657-57624689
64251 chr12 57624685 57624685 1 + G T SARC 57624678 + 57624658 57624698 41 ACTGGGGAAGCAAACAGGGGCTGGACAGGCCAGGAGAGCCT ACTGGGGAAGCAAACAGGGGCTGGACATGCCAGGAGAGCCT < 41bp 1 0.760840501890774 1 0.515624701976776 experiment 0.478318996218451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57624678 chr12:57624685 nonsynonymous SNV 0.981 4 28 hm5C_associated_SNPs_32042 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:57624657-57624689
64251 chr12 57624685 57624685 1 + G T SARC 57624701 + 57624681 57624721 41 GACAGGCCAGGAGAGCCTGTCGGACAGTGATCCTGAGATGT GACATGCCAGGAGAGCCTGTCGGACAGTGATCCTGAGATGT < 41bp 1 0.348882353942483 1 0.399427473545074 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57624701 chr12:57624685 nonsynonymous SNV 0.981 4 5 hm5C_associated_SNPs_32043 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:57624657-57624689
64251 chr1 145116299 145116299 1 + G T SARC 145116287 + 145116267 145116307 41 TTCCTTCAAAGAAGGCAGTCCTTTGGGAAGGTGTTTTTTTT TTCCTTCAAAGAAGGCAGTCCTTTGGGAAGGTTTTTTTTTT < 41bp 1 0.0482530806814557 1 0.120517730712891 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145116287 chr1:145116299 . . 0 33 hm5C_associated_SNPs_32045 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:145116229-145116310
64251 chr16 66998569 66998569 1 + C A SARC 66998564 + 66998544 66998584 41 GCAGGGCTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT GCAGGGCTGTTCCACAGAGCCATCAAACAGAGTGGGGTCAT < 41bp 1 0.486275914085571 1 0.238858103752136 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66998564 chr16:66998569 nonsynonymous SNV 0.207 0 26 hm5C_associated_SNPs_32046 0 0 1 GRWD1 POSTAR2 ENCODE chr16:66998567-66998632
64251 chr5 141353192 141353192 1 + G T SARC 141353198 + 141353178 141353218 41 CAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGG CAGGAGGATGAATTTCTGGCCCTGGCAAGTATTTACGATGG < 41bp 1 0.303471300097903 1 0.155482798814774 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141353198 chr5:141353192 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_32047 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:141353152-141353203
64251 chr15 32925203 32925203 1 + G T SARC 32925212 + 32925192 32925232 41 CAAGCTCAGAAGGGTCATCTCAGAGTTCACTCTCTCCTGTA CAAGCTCAGAATGGTCATCTCAGAGTTCACTCTCTCCTGTA < 41bp 1 0.769018974693787 1 0.590401947498322 experiment 0.461962050612426 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32925212 chr15:32925203 nonsynonymous SNV 0.998 3 12 hm5C_associated_SNPs_32048 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:32925179-32925207
64251 chr15 48626662 48626662 1 + G A SARC 48626680 + 48626660 48626700 41 ACGGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAG ACAGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAG < 41bp 1 0.0989200373412812 1 0.0728571116924286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626680 chr15:48626662 synonymous SNV . 0 3 hm5C_associated_SNPs_32049 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:48626631-48626665
64251 chr15 48626662 48626662 1 + G A SARC 48626682 + 48626662 48626702 41 GGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAG AGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAG < 41bp 1 0.201228656761242 1 0.0883403718471527 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626682 chr15:48626662 synonymous SNV . 0 1 hm5C_associated_SNPs_32050 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:48626631-48626665
64251 chr12 132325144 132325144 1 + C A SARC 132325139 + 132325119 132325159 41 GTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACAC GTCCGGACGTTCCCACGGGACTCACAACTGGGGCACGACAC < 41bp 1 0.209403633568643 1 0.0608567595481873 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325139 chr12:132325144 nonsynonymous SNV 0.253 0 26 hm5C_associated_SNPs_32052 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:132325073-132325162
64251 chr9 131456028 131456028 1 + G T SARC 131456045 + 131456025 131456065 41 GCTGATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCC GCTTATGAGTTAGGAGAGGTCATCAAAGATGATATTTGGCC < 41bp 1 0.583890078948787 1 0.101844608783722 experiment 0.832219842102426 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SET ENSG00000119335 CDS Human protein_coding chr9:131456045 chr9:131456028 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_32064 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr9:131456020-131456040
64251 chr7 90355898 90355898 1 + G A SARC 90355889 + 90355869 90355909 41 TTCTTTTCTCAGATATGTGTCACAAAGATGTCTACACGGAA TTCTTTTCTCAGATATGTGTCACAAAGATATCTACACGGAA < 41bp 1 0.322402928733725 1 0.207277059555054 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355889 chr7:90355898 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_32065 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355898 90355898 1 + G A SARC 90355891 + 90355871 90355911 41 CTTTTCTCAGATATGTGTCACAAAGATGTCTACACGGAACT CTTTTCTCAGATATGTGTCACAAAGATATCTACACGGAACT < 41bp 1 0.151263178761801 1 0.115098297595978 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355891 chr7:90355898 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_32066 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355898 90355898 1 + G A SARC 90355900 + 90355880 90355920 41 GATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAA GATATGTGTCACAAAGATATCTACACGGAACTGCCAGGGAA < 41bp 1 0.616901057648882 1 0.158428400754929 experiment 0.766197884702236 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355900 chr7:90355898 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_32067 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355898 90355898 1 + G A SARC 90355903 + 90355883 90355923 41 ATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGG ATGTGTCACAAAGATATCTACACGGAACTGCCAGGGAATGG < 41bp 1 0.36567798842254 1 0.0842422246932983 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355903 chr7:90355898 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_32068 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355898 90355898 1 + G A SARC 90355905 + 90355885 90355925 41 GTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGAC GTGTCACAAAGATATCTACACGGAACTGCCAGGGAATGGAC < 41bp 1 0.435889989223437 1 0.21717044711113 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355905 chr7:90355898 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_32069 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 100470808 100470808 1 + G A SARC 100470816 + 100470796 100470836 41 GTGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCT GTGTGGGCTGCTACTCTCCTCTGAGGGCGAGTGTCAGGGCT < 41bp 1 0.733064831226916 1 0.667950391769409 experiment 0.533870337546168 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470816 chr7:100470808 synonymous SNV . 0 13 hm5C_associated_SNPs_32071 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100470785-100470859
64251 chr9 101891184 101891184 1 + G A SARC 101891198 + 101891178 101891218 41 ACTTGTGTGACAGATGGGCTCTGCTTTGTCTCTGTCACAGA ACTTGTATGACAGATGGGCTCTGCTTTGTCTCTGTCACAGA < 41bp 1 0.715124433788142 1 0.111599773168564 experiment 0.569751132423715 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101891198 chr9:101891184 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_32072 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:101891169-101891191
64251 chr1 7796530 7796530 1 + G A SARC 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCAGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG < 41bp 1 0.29064872734419 1 0.169453322887421 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796530 nonsynonymous SNV 0.898 4 7 hm5C_associated_SNPs_32073 1 0 2 BUD13 POSTAR2 ENCODE chr1:7796466-7796582
64251 chr7 142991804 142991804 1 + C A SARC 142991795 + 142991775 142991815 41 GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTC GCTCTGGAGGGGATGTGGACCACAGTACTATAGTCACCCTC < 41bp 1 0.785029883446036 1 0.587744355201721 experiment 0.429940233107929 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991795 chr7:142991804 nonsynonymous SNV 0.989 3 30 hm5C_associated_SNPs_32074 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr7:142991763-142991804
64251 chr16 69353364 69353364 1 + G A SARC 69353363 + 69353343 69353383 41 AAATCCTACCTGGCCAAAGCCGTGGCAACAGAGGCCAACAA AAATCCTACCTGGCCAAAGCCATGGCAACAGAGGCCAACAA < 41bp 1 0.577511755063497 1 0.488075524568558 experiment 0.844976489873006 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69353363 chr16:69353364 nonsynonymous SNV 0.705 5 22 hm5C_associated_SNPs_32076 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:69353344-69353368
64251 chr19 6362546 6362546 1 + C A SARC 6362549 + 6362529 6362569 41 ATCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTC ATCCACATGTACATCAAAAGCCCTGGTGAGCAGGGTCTTTC < 41bp 1 0.299855188170236 1 0.03522127866745 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6362549 chr19:6362546 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_32078 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr19 6362546 6362546 1 + C A SARC 6362550 + 6362530 6362570 41 TCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTCC TCCACATGTACATCAAAAGCCCTGGTGAGCAGGGTCTTTCC < 41bp 1 0.230417660114939 1 0.0747759640216827 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6362550 chr19:6362546 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_32079 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr1 6271128 6271128 1 + G T SARC 6271142 + 6271122 6271162 41 GCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG GCCACTTCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG < 41bp 1 0.339210774904841 1 0.271536767482758 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF207 ENSG00000158286 CDS Human protein_coding chr1:6271142 chr1:6271128 synonymous SNV . 0 7 hm5C_associated_SNPs_32081 0 0 6 BUD13 POSTAR2 ENCODE chr1:6271127-6271302
64251 chr1 11333758 11333758 1 + G T SARC 11333762 + 11333742 11333782 41 GCCCTGAGGCCCTGGAGCTTCAGTGCCTCACTCACACCGGT GCCCTGAGGCCCTGGATCTTCAGTGCCTCACTCACACCGGT < 41bp 1 0.671296932148969 1 0.901836276054382 experiment 0.657406135702062 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11333762 chr1:11333758 nonsynonymous SNV 1.000 5 17 hm5C_associated_SNPs_32082 0 0 2 DDX3X POSTAR2 ENCODE chr1:11333692-11333769
64251 chr1 36026484 36026484 1 + G T SARC 36026504 + 36026484 36026524 41 GCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCT TCCCCTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCT < 41bp 1 0.187241323925852 1 0.104364514350891 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026504 chr1:36026484 synonymous SNV . 0 1 hm5C_associated_SNPs_32087 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:36026460-36026500
64251 chr1 109801331 109801331 1 + G T SARC 109801320 + 109801300 109801340 41 CGGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTC CGGTGGGCCAGCCGCCAGGGCCCGGGGGCGGTCCGCCCTTC < 41bp 1 0.539340468650066 1 0.81816828250885 experiment 0.921319062699867 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801320 chr1:109801331 synonymous SNV . 0 32 hm5C_associated_SNPs_32088 0 0 4 BUD13 POSTAR2 ENCODE chr1:109801329-109801370
64251 chr1 109801331 109801331 1 + G T SARC 109801321 + 109801301 109801341 41 GGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCC GGTGGGCCAGCCGCCAGGGCCCGGGGGCGGTCCGCCCTTCC < 41bp 1 0.606411569277825 1 0.853824496269226 experiment 0.787176861444351 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801321 chr1:109801331 synonymous SNV . 0 31 hm5C_associated_SNPs_32089 0 0 4 BUD13 POSTAR2 ENCODE chr1:109801329-109801370
64251 chr1 109801331 109801331 1 + G T SARC 109801322 + 109801302 109801342 41 GTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCT GTGGGCCAGCCGCCAGGGCCCGGGGGCGGTCCGCCCTTCCT < 41bp 1 0.773974977789072 1 0.956340193748474 experiment 0.452050044421855 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801322 chr1:109801331 synonymous SNV . 0 30 hm5C_associated_SNPs_32090 0 0 4 BUD13 POSTAR2 ENCODE chr1:109801329-109801370
64251 chr1 109801331 109801331 1 + G T SARC 109801328 + 109801308 109801348 41 CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCCCTC CAGCCGCCAGGGCCCGGGGGCGGTCCGCCCTTCCTGCCCTC < 41bp 1 0.091726862903471 1 0.686029076576233 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801328 chr1:109801331 synonymous SNV . 0 24 hm5C_associated_SNPs_32091 0 0 4 BUD13 POSTAR2 ENCODE chr1:109801329-109801370
64251 chr1 214814510 214814510 1 + G T SARC 214814517 + 214814497 214814537 41 ACTCTCTAAAGGAGCTACAACTTTTATCCGAAACCCTAAGC ACTCTCTAAAGGATCTACAACTTTTATCCGAAACCCTAAGC < 41bp 1 0.0416552867421343 1 0.0613869726657867 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814517 chr1:214814510 nonsynonymous SNV 0.992 2 14 hm5C_associated_SNPs_32092 0 0 18 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr1 214814510 214814510 1 + G T SARC 214814524 + 214814504 214814544 41 AAAGGAGCTACAACTTTTATCCGAAACCCTAAGCTTGGAGA AAAGGATCTACAACTTTTATCCGAAACCCTAAGCTTGGAGA < 41bp 1 0.185990344929279 1 0.330145359039307 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814524 chr1:214814510 nonsynonymous SNV 0.992 2 7 hm5C_associated_SNPs_32093 0 0 18 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr1 214814510 214814510 1 + G T SARC 214814525 + 214814505 214814545 41 AAGGAGCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAA AAGGATCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAA < 41bp 1 0.339556240226753 1 0.474658250808716 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814525 chr1:214814510 nonsynonymous SNV 0.992 2 6 hm5C_associated_SNPs_32094 0 0 18 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr1 214814510 214814510 1 + G T SARC 214814530 + 214814510 214814550 41 GCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAG TCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAG < 41bp 1 0.0855720573417743 1 0.0943727493286133 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814530 chr1:214814510 nonsynonymous SNV 0.992 2 1 hm5C_associated_SNPs_32095 0 0 18 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214814406-214814541
64251 chr2 85273273 85273273 1 + G T SARC 85273266 + 85273246 85273286 41 GACATGTACGTAGAATGTTTCACCCTGGCCGGGGATTAGGA GACATGTACGTAGAATGTTTCACCCTGTCCGGGGATTAGGA < 41bp 1 0.293325489497567 1 0.0879122316837311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KCMF1 ENSG00000176407 CDS Human protein_coding chr2:85273266 chr2:85273273 nonsynonymous SNV 0.999 4 28 hm5C_associated_SNPs_32096 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:85273248-85273282
64251 chr2 153575292 153575292 1 + G T SARC 153575297 + 153575277 153575317 41 GGATGCGACCAAGTGGCCCGCGACCTGCGGGCGGAGTTCTC GGATGCGACCAAGTGTCCCGCGACCTGCGGGCGGAGTTCTC < 41bp 1 0.545044528804107 1 0.153365701436996 experiment 0.909910942391786 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575297 chr2:153575292 nonsynonymous SNV 0.942 1 16 hm5C_associated_SNPs_32097 0 0 9 CSTF2T POSTAR2 ENCODE chr2:153575232-153575318
64251 chr3 45043081 45043081 1 + G T SARC 45043087 + 45043067 45043107 41 CCATTGCTGTAAAGGCTGCTCTCTTCAATACAAGGTAAGTC CCATTGCTGTAAAGTCTGCTCTCTTCAATACAAGGTAAGTC < 41bp 1 0.193335612932027 1 0.0979932844638824 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45043087 chr3:45043081 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_32098 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr3:45043046-45043096
64251 chr3 49736468 49736468 1 + G T SARC 49736459 + 49736439 49736479 41 TTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA TTGAGAACCTGTCCAGGGGCCTGGGTATGTCCTACTTCCCA < 41bp 1 0.547340548490713 1 0.213052839040756 experiment 0.905318903018574 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736459 chr3:49736468 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_32099 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:49736460-49736480
64251 chr4 3174765 3174765 1 + G T SARC 3174757 + 3174737 3174777 41 AGTGTGAGGCCAGGCTTGTACCACTACTGCTTCATGGCCCC AGTGTGAGGCCAGGCTTGTACCACTACTTCTTCATGGCCCC < 41bp 1 0.154702768963487 1 0.642927348613739 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3174757 chr4:3174765 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_32100 0 0 3 FMR1 POSTAR2 ENCODE chr4:3174719-3174821
64251 chr4 38117454 38117454 1 + G T SARC 38117444 + 38117424 38117464 41 ACCAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTAGCA ACCAGGAAGTGGGATATTGCCAAGGTCTCATCTTTGTAGCA < 41bp 1 0.754727266563939 1 0.893110275268555 experiment 0.490545466872121 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38117444 chr4:38117454 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_32101 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:38117426-38117456
64251 chr4 88036071 88036071 1 + G T SARC 88036091 + 88036071 88036111 41 GCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC TCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC < 41bp 1 0.689159972371267 1 0.454369366168976 experiment 0.621680055257466 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036091 chr4:88036071 nonsynonymous SNV 0.012 0 1 hm5C_associated_SNPs_32102 0 0 4 EIF3H POSTAR2 ENCODE chr4:88036049-88036083
64251 chr5 176720902 176720902 1 + G T SARC 176720884 + 176720864 176720904 41 CATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAGATGTGCC CATCTGCGGGAAGGAAGCAGCCTCCTTCTGTGAGATGTTCC < 41bp 1 0.0216310530007285 1 0.141173601150513 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176720884 chr5:176720902 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_32105 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:176720887-176720918
64251 chr6 35392260 35392260 1 + C T SARC 35392256 + 35392236 35392276 41 CAGTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGC CAGTGGAGACCGTGCGGGAGCTCATTGAGTTCGCCAAGAGC < 41bp 1 0.300264349608787 1 0.087158203125 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392256 chr6:35392260 nonsynonymous SNV 0.704 3 25 hm5C_associated_SNPs_32106 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35392260 35392260 1 + C T SARC 35392258 + 35392238 35392278 41 GTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGCAT GTGGAGACCGTGCGGGAGCTCATTGAGTTCGCCAAGAGCAT < 41bp 1 0.2338735982404 1 0.118626058101654 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392258 chr6:35392260 nonsynonymous SNV 0.704 3 23 hm5C_associated_SNPs_32107 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 144875988 144875988 1 + G T SARC 144875991 + 144875971 144876011 41 TCTATATTCTTCAGCAAGCCCGACGGGATCCACTCACCAAA TCTATATTCTTCAGCAATCCCGACGGGATCCACTCACCAAA < 41bp 1 0.2944715901601 1 0.609919309616089 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144875991 chr6:144875988 nonsynonymous SNV 0.986 0 18 hm5C_associated_SNPs_32108 0 0 2 GRWD1 POSTAR2 ENCODE chr6:144875978-144876011
64251 chr6 155139673 155139673 1 + G T SARC 155139674 + 155139654 155139694 41 TCGACAAGATGCATTTCGAGCTCTTCAGAAACTCAGTTCTG TCGACAAGATGCATTTCGATCTCTTCAGAAACTCAGTTCTG < 41bp 1 0.205323115996052 1 0.281758189201355 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155139674 chr6:155139673 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_32109 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:155139615-155139696
64251 chr7 79842153 79842153 1 + G T SARC 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATCAAAAAGATCCCTCTCACTATATGCTATCCAG < 41bp 1 0.198893165518322 1 0.0616075396537781 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842153 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_32110 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr7 91981899 91981899 1 + G T SARC 91981887 + 91981867 91981907 41 AGGGTCAAATACATCTGGATCTGATACACTCAGCTTCCCAT AGGGTCAAATACATCTGGATCTGATACACTCATCTTCCCAT < 41bp 1 0.278014382230421 1 0.0317254662513733 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91981887 chr7:91981899 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_32111 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:91981889-91981914
64251 chr8 22064422 22064422 1 + G T SARC 22064413 + 22064393 22064433 41 ACCAGTGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA ACCAGTGGTACCATCACCAGCCCCAACTGTCCTGACAAGTA < 41bp 1 0.182847851274181 1 0.578626871109009 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064413 chr8:22064422 nonsynonymous SNV 0.999 3 30 hm5C_associated_SNPs_32112 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22064416-22064440
64251 chr8 27288490 27288490 1 + G T SARC 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGTCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA < 41bp 1 0.722849885180696 1 0.967969417572021 experiment 0.554300229638607 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288490 nonsynonymous SNV 0.866 0 4 hm5C_associated_SNPs_32113 0 0 2 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr8 73921125 73921125 1 + G T SARC 73921113 + 73921093 73921133 41 AGGGGCAGTACCCAAGCGAGCCATTTAACATGGCGGAGGAT AGGGGCAGTACCCAAGCGAGCCATTTAACATGTCGGAGGAT < 41bp 1 0.224175959567559 1 0.0396697521209717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921113 chr8:73921125 nonsynonymous SNV 0.544 4 33 hm5C_associated_SNPs_32114 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:73921120-73921140
64251 chr8 145735842 145735842 1 + G T SARC 145735855 + 145735835 145735875 41 GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT GTGGTCTTCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT < 41bp 1 0.222983886619281 1 0.0484377145767212 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735855 chr8:145735842 nonsynonymous SNV 0.667 0 8 hm5C_associated_SNPs_32116 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr8 145735842 145735842 1 + G T SARC 145735858 + 145735838 145735878 41 GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT GTCTTCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT < 41bp 1 0.159799327565676 1 0.269829928874969 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735858 chr8:145735842 nonsynonymous SNV 0.667 0 5 hm5C_associated_SNPs_32117 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr9 35733267 35733267 1 + G T SARC 35733277 + 35733257 35733297 41 ATATGGAGGAGCTGGCAGAGCAGGTACTTGACTTGATTTTC ATATGGAGGATCTGGCAGAGCAGGTACTTGACTTGATTTTC < 41bp 1 0.648718591998564 1 0.468078374862671 experiment 0.702562816002872 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733277 chr9:35733267 nonsynonymous SNV 0.007 0 11 hm5C_associated_SNPs_32118 0 0 1 PPIG POSTAR2 ENCODE chr9:35733226-35733279
64251 chr10 112335143 112335143 1 + G T SARC 112335144 + 112335124 112335164 41 GTCATCTTCGTCCAGAACAGCGGTTGGCTTTATTGCATGTG GTCATCTTCGTCCAGAACATCGGTTGGCTTTATTGCATGTG < 41bp 1 0.284311136062667 1 0.129537284374237 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112335144 chr10:112335143 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_32119 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:112335103-112335147
64251 chr11 61106782 61106782 1 + G T SARC 61106796 + 61106776 61106816 41 GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT GGCCTGTCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT < 41bp 1 0.609237040671439 1 0.572731852531433 experiment 0.781525918657122 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106796 chr11:61106782 nonsynonymous SNV 0.901 4 7 hm5C_associated_SNPs_32120 0 0 4 PPIG POSTAR2 ENCODE chr11:61106759-61106904
64251 chr11 61106782 61106782 1 + G T SARC 61106797 + 61106777 61106817 41 GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGTG GCCTGTCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGTG < 41bp 1 0.786570097479186 1 0.736831068992615 experiment 0.426859805041629 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106797 chr11:61106782 nonsynonymous SNV 0.901 4 6 hm5C_associated_SNPs_32121 0 0 4 PPIG POSTAR2 ENCODE chr11:61106759-61106904
64251 chr11 76892613 76892613 1 + G T SARC 76892615 + 76892595 76892635 41 GCCTGCCAGGCCAGGAGGGCCAGGCACCTAGTGGCTTTGAG GCCTGCCAGGCCAGGAGGTCCAGGCACCTAGTGGCTTTGAG < 41bp 1 0.315603012998236 1 0.536474943161011 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO7A ENSG00000137474 CDS Human protein_coding chr11:76892615 chr11:76892613 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_32123 0 0 2 EIF3H POSTAR2 ENCODE chr11:76892566-76892614
64251 chr11 120957735 120957735 1 + G T SARC 120957753 + 120957733 120957773 41 CAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG CATCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG < 41bp 1 0.0365687017525604 1 0.0978855490684509 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957753 chr11:120957735 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_32124 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:120957733-120957760
64251 chr12 53663544 53663544 1 + G T SARC 53663559 + 53663539 53663579 41 CATCAGCGCAGTGGAGAAGGCTCACAGTTACCTAAGGAACA CATCATCGCAGTGGAGAAGGCTCACAGTTACCTAAGGAACA < 41bp 1 0.255442399429148 1 0.0633672475814819 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663559 chr12:53663544 nonsynonymous SNV 0.002 0 6 hm5C_associated_SNPs_32125 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53663542-53663571
64251 chr12 123102908 123102908 1 + G T SARC 123102893 + 123102873 123102913 41 TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAAGCGTGG TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAATCGTGG < 41bp 1 0.0589275157674176 1 0.03975909948349 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123102893 chr12:123102908 nonsynonymous SNV 0.978 1 36 hm5C_associated_SNPs_32126 0 0 4 DDX24 POSTAR2 ENCODE chr12:123102889-123102930
64251 chr15 93482838 93482838 1 + G T SARC 93482839 + 93482819 93482859 41 AACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAG AACCTCGTGTTAAAAAGCATCCGAAGACTCAGCGTGGAAAG < 41bp 1 0.274701441012883 1 0.0412566363811493 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482839 chr15:93482838 nonsynonymous SNV 0.982 0 20 hm5C_associated_SNPs_32128 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482838 93482838 1 + G T SARC 93482840 + 93482820 93482860 41 ACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGA ACCTCGTGTTAAAAAGCATCCGAAGACTCAGCGTGGAAAGA < 41bp 1 0.164663951304198 1 0.364522397518158 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482840 chr15:93482838 nonsynonymous SNV 0.982 0 19 hm5C_associated_SNPs_32129 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482838 93482838 1 + G T SARC 93482846 + 93482826 93482866 41 TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAA TGTTAAAAAGCATCCGAAGACTCAGCGTGGAAAGAGAAAAA < 41bp 1 0.289824473176692 1 0.234992265701294 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482846 chr15:93482838 nonsynonymous SNV 0.982 0 13 hm5C_associated_SNPs_32130 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482838 93482838 1 + G T SARC 93482848 + 93482828 93482868 41 TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAAAG TTAAAAAGCATCCGAAGACTCAGCGTGGAAAGAGAAAAAAG < 41bp 1 0.519249240924701 1 0.508222341537476 experiment 0.961501518150598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482848 chr15:93482838 nonsynonymous SNV 0.982 0 11 hm5C_associated_SNPs_32131 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr16 697452 697452 1 + G T SARC 697463 + 697443 697483 41 GTGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC GTGTGAATGTCCGGCGGGCCCCCTCCACGTCCCCATCCTTC < 41bp 1 0.120143591954587 1 0.033041387796402 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697463 chr16:697452 nonsynonymous SNV 0.275 2 10 hm5C_associated_SNPs_32132 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:697440-697460
64251 chr16 67315532 67315532 1 + G T SARC 67315518 + 67315498 67315538 41 TGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCC TGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTTCCTTCC < 41bp 1 0.545577837898003 1 0.169688165187836 experiment 0.908844324203995 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67315518 chr16:67315532 synonymous SNV . 0 35 hm5C_associated_SNPs_32133 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67315494-67315552
64251 chr17 37676266 37676266 1 + G T SARC 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCCTAGTAATCGGTGCACAGCTGAACAGACCCTACA < 41bp 1 0.185189673206685 1 0.155174732208252 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676266 nonsynonymous SNV 0.983 1 15 hm5C_associated_SNPs_32135 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37676221-37676323
64251 chr18 19433159 19433159 1 + G T SARC 19433161 + 19433141 19433181 41 TTCTTTTTCAACCCTGTGGCCACATGTGTGCTTGTGAGAGT TTCTTTTTCAACCCTGTGTCCACATGTGTGCTTGTGAGAGT < 41bp 1 0.27675902536511 1 0.531984388828278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19433161 chr18:19433159 nonsynonymous SNV 0.974 4 19 hm5C_associated_SNPs_32136 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr18:19433140-19433161
64251 chr19 13049547 13049547 1 + G T SARC 13049544 + 13049524 13049564 41 CTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAA CTCCTCGGCCTGGCCGTCGCCGATCCTGCCGTCTACTTCAA < 41bp 1 0.278674740648601 1 0.426328748464584 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049544 chr19:13049547 nonsynonymous SNV 0.054 0 24 hm5C_associated_SNPs_32137 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:13049420-13049560
64251 chr19 13049547 13049547 1 + G T SARC 13049553 + 13049533 13049573 41 CTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTT CTGGCCGTCGCCGATCCTGCCGTCTACTTCAAGGAGCAGTT < 41bp 1 0.227912440288607 1 0.253037601709366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049553 chr19:13049547 nonsynonymous SNV 0.054 0 15 hm5C_associated_SNPs_32138 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:13049420-13049560
64251 chr19 34818688 34818688 1 + G T SARC 34818689 + 34818669 34818709 41 TTTCCAGGCATATAAGATAGCTCTGGAAAGCTTAGGACACT TTTCCAGGCATATAAGATATCTCTGGAAAGCTTAGGACACT < 41bp 1 0.268121793064202 1 0.241961508989334 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34818689 chr19:34818688 nonsynonymous SNV 0.999 3 20 hm5C_associated_SNPs_32139 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:34818682-34818715
64251 chr20 46268480 46268480 1 + G T SARC 46268463 + 46268443 46268483 41 GATTATAATACTTCTTTACCCAGACCTGCACTGGGTGGCTC GATTATAATACTTCTTTACCCAGACCTGCACTGGGTGTCTC < 41bp 1 0.270830913291394 1 0.400874137878418 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46268463 chr20:46268480 nonsynonymous SNV 0.008 2 38 hm5C_associated_SNPs_32140 0 0 2 FMR1 POSTAR2 ENCODE chr20:46268449-46268529
64251 chr20 60881341 60881341 1 + G T SARC 60881329 + 60881309 60881349 41 CAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA CAACCCCCCGATGCCTGGGGCGCTGGGGGCCATCGGAAGCA < 41bp 1 0.261353017224966 1 0.449165910482407 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881329 chr20:60881341 nonsynonymous SNV 0.003 2 33 hm5C_associated_SNPs_32141 0 0 5 GRWD1 POSTAR2 ENCODE chr20:60881293-60881350
64251 chr20 60881341 60881341 1 + G T SARC 60881331 + 60881311 60881351 41 ACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCAGC ACCCCCCGATGCCTGGGGCGCTGGGGGCCATCGGAAGCAGC < 41bp 1 0.796123979780338 1 0.608330726623535 experiment 0.407752040439324 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881331 chr20:60881341 nonsynonymous SNV 0.003 2 31 hm5C_associated_SNPs_32142 0 0 5 GRWD1 POSTAR2 ENCODE chr20:60881293-60881350
64251 chr20 62305426 62305426 1 + G T SARC 62305411 + 62305391 62305431 41 GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCATCGCGG < 41bp 1 0.0808785457484676 1 0.306300401687622 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305411 chr20:62305426 nonsynonymous SNV 0.002 0 36 hm5C_associated_SNPs_32143 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chr20 62305426 62305426 1 + G T SARC 62305412 + 62305392 62305432 41 GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCATCGCGGA < 41bp 1 0.121687063963287 1 0.0706267058849335 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305412 chr20:62305426 nonsynonymous SNV 0.002 0 35 hm5C_associated_SNPs_32144 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chr20 62305426 62305426 1 + G T SARC 62305417 + 62305397 62305437 41 GCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGACTCCC GCAGCAGGGTGAGCCCCACCCGGAGTTCATCGCGGACTCCC < 41bp 1 0.791139850713104 1 0.750843286514282 experiment 0.417720298573793 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305417 chr20:62305426 nonsynonymous SNV 0.002 0 30 hm5C_associated_SNPs_32145 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chrX 70356355 70356355 1 + G T SARC 70356356 + 70356336 70356376 41 TGCCCCCAGAAGATGAGGAGCCGCCTGCTCCTACCCTGCTA TGCCCCCAGAAGATGAGGATCCGCCTGCTCCTACCCTGCTA < 41bp 1 0.203233091774363 1 0.10926753282547 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70356356 chrX:70356355 nonsynonymous SNV 0.998 3 20 hm5C_associated_SNPs_32146 0 0 1 RPS3 POSTAR2 ENCODE chrX:70356337-70356405
64251 chrX 105855824 105855824 1 + G T SARC 105855825 + 105855805 105855845 41 AACTCCCTTCAGAAATAGAGCGCACCAGGAGAAACCAGAGA AACTCCCTTCAGAAATAGATCGCACCAGGAGAAACCAGAGA < 41bp 1 0.292573957725159 1 0.166525989770889 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855825 chrX:105855824 nonsynonymous SNV 0.986 0 20 hm5C_associated_SNPs_32147 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chrX 105855824 105855824 1 + G T SARC 105855840 + 105855820 105855860 41 TAGAGCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG TAGATCGCACCAGGAGAAACCAGAGAGGCCTTTAAGAGGCG < 41bp 1 0.705891352039738 1 0.644283533096313 experiment 0.588217295920524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855840 chrX:105855824 nonsynonymous SNV 0.986 0 5 hm5C_associated_SNPs_32148 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:105855798-105855830
64251 chr1 214814417 214814417 1 + G T SARC 214814421 + 214814401 214814441 41 AGAACAAGGAAAAAGAGCTGCAACTTTTAAATGATAAGGTA AGAACAAGGAAAAAGATCTGCAACTTTTAAATGATAAGGTA < 41bp 1 0.210585460876497 1 0.273178905248642 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214814421 chr1:214814417 nonsynonymous SNV 0.675 2 17 hm5C_associated_SNPs_32149 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214814335-214814467
64251 chr2 32613926 32613926 1 + G T SARC 32613943 + 32613923 32613963 41 GTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACC GTGTCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACC < 41bp 1 0.108504247592956 1 0.581556856632233 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32613943 chr2:32613926 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_32150 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32613855-32613940
64251 chr5 134130594 134130594 1 + G T SARC 134130604 + 134130584 134130624 41 TATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGG TATGTTTTCATCTACTTTCCCCAGAGCTATGGAGGCTTTGG < 41bp 1 0.642094958973777 1 0.502299308776855 experiment 0.715810082052446 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130604 chr5:134130594 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_32155 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:134130545-134130596
64251 chr5 134130594 134130594 1 + G T SARC 134130605 + 134130585 134130625 41 ATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGGC ATGTTTTCATCTACTTTCCCCAGAGCTATGGAGGCTTTGGC < 41bp 1 0.364728380795317 1 0.353326201438904 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130605 chr5:134130594 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_32156 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:134130545-134130596
64251 chr7 22896273 22896273 1 + G T SARC 22896268 + 22896248 22896288 41 CTCTAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAA CTCTAATCTGATTTTATGTGCTTCTTCTGTGATGGATTAAA < 41bp 1 0.0828969405546682 1 0.0416432023048401 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896268 chr7:22896273 . . 0 26 hm5C_associated_SNPs_32158 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:22896220-22896280
64251 chr7 22896273 22896273 1 + G T SARC 22896271 + 22896251 22896291 41 TAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAAGGA TAATCTGATTTTATGTGCTTCTTCTGTGATGGATTAAAGGA < 41bp 1 0.164649103196407 1 0.0713326930999756 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896271 chr7:22896273 . . 0 23 hm5C_associated_SNPs_32159 0 0 84 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:22896220-22896280
64251 chr8 90770311 90770311 1 + G T SARC 90770303 + 90770283 90770323 41 GGGACCATGAACGGGGAGGCCATCTGCAGCGCCCTGCCCAC GGGACCATGAACGGGGAGGCCATCTGCATCGCCCTGCCCAC < 41bp 1 0.664802570550078 1 0.179072201251984 experiment 0.670394858899844 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90770303 chr8:90770311 nonsynonymous SNV 0.715 1 29 hm5C_associated_SNPs_32161 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:90770310-90770346
64251 chr9 33917123 33917123 1 + G T SARC 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAACATCTCAGATTTGCTTTACGACGACT < 41bp 1 0.351265782112784 1 0.25821715593338 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917123 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_32162 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr9:33917085-33917123
64251 chr9 33917123 33917123 1 + G T SARC 33917142 + 33917122 33917162 41 AGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT ATCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT < 41bp 1 0.34493121709009 1 0.0427992641925812 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917142 chr9:33917123 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_32163 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr9:33917085-33917123
64251 chr11 403985 403985 1 + G T SARC 403978 + 403958 403998 41 GCCACCTGATCGAGAAGCTGCCGGGCAGCGTGGGTGAGAAG GCCACCTGATCGAGAAGCTGCCGGGCATCGTGGGTGAGAAG < 41bp 1 0.264587624953241 1 0.360161423683167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKP3 ENSG00000184363 CDS Human protein_coding chr11:403978 chr11:403985 nonsynonymous SNV 0.482 2 28 hm5C_associated_SNPs_32164 0 0 2 DDX24 POSTAR2 ENCODE chr11:403979-404000
64251 chr11 403985 403985 1 + G T SARC 403979 + 403959 403999 41 CCACCTGATCGAGAAGCTGCCGGGCAGCGTGGGTGAGAAGT CCACCTGATCGAGAAGCTGCCGGGCATCGTGGGTGAGAAGT < 41bp 1 0.369446288072317 1 0.472202390432358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKP3 ENSG00000184363 CDS Human protein_coding chr11:403979 chr11:403985 nonsynonymous SNV 0.482 2 27 hm5C_associated_SNPs_32165 0 0 2 DDX24 POSTAR2 ENCODE chr11:403979-404000
64251 chr14 24784929 24784929 1 + G T SARC 24784923 + 24784903 24784943 41 TTCATCTCTCTGCTGGCTATCATCCTGCTGTCAGTGGCGCT TTCATCTCTCTGCTGGCTATCATCCTTCTGTCAGTGGCGCT < 41bp 1 0.135431473028936 1 0.784430503845215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTB4R ENSG00000213903 CDS Human protein_coding chr14:24784923 chr14:24784929 synonymous SNV . 0 27 hm5C_associated_SNPs_32166 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:24784926-24784953
64251 chr14 74424925 74424925 1 + G T SARC 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC CCATTTCCTATGGCCGACTCCATCCCTTGGGTTCATATTAC < 41bp 1 0.142850962240246 1 0.0695010721683502 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424925 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_32167 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:74424902-74424934
64251 chr15 96875651 96875651 1 + G T SARC 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGCGCATCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC < 41bp 1 0.542233734440837 1 0.449511826038361 experiment 0.915532531118326 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875651 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_32168 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:96875640-96875660
64251 chr16 630876 630876 1 + G T SARC 630864 + 630844 630884 41 CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAG CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCTCCGTGCAG < 41bp 1 0.290853327798436 1 0.334963291883469 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:630864 chr16:630876 nonsynonymous SNV 0.392 0 33 hm5C_associated_SNPs_32169 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:630869-630899
64251 chr17 78078757 78078757 1 + G T SARC 78078746 + 78078726 78078766 41 AGCAGGGGCTGCAGGGAGCCCAGATGGGGCAGCCCTGGTGC AGCAGGGGCTGCAGGGAGCCCAGATGGGGCATCCCTGGTGC < 41bp 1 0.71260315972476 1 0.804199993610382 experiment 0.574793680550481 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078746 chr17:78078757 nonsynonymous SNV 0.984 1 32 hm5C_associated_SNPs_32170 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:78078748-78078780
64251 chr19 9939308 9939308 1 + G T SARC 9939290 + 9939270 9939310 41 CGGATGATACCATCGGGGACCTTAAGAAGCTGATTGCAGCC CGGATGATACCATCGGGGACCTTAAGAAGCTGATTGCATCC < 41bp 1 0.429092446128445 1 0.0917793810367584 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBL5 ENSG00000198258 CDS Human protein_coding chr19:9939290 chr19:9939308 nonsynonymous SNV 0.995 4 39 hm5C_associated_SNPs_32171 0 0 43 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:9939268-9939343
64251 chr19 12902828 12902828 1 + G T SARC 12902813 + 12902793 12902833 41 TCTGGTCAGGGCTCGGACACCGGCGCGTCTCTCAAGCTCGC TCTGGTCAGGGCTCGGACACCGGCGCGTCTCTCAATCTCGC < 41bp 1 0.788988148707832 1 0.500322878360748 experiment 0.422023702584336 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12902813 chr19:12902828 nonsynonymous SNV 0.927 3 36 hm5C_associated_SNPs_32172 0 0 1 RBM15 POSTAR2 ENCODE chr19:12902799-12902830
64251 chr19 36216702 36216702 1 + C T SARC 36216704 + 36216684 36216724 41 TATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGGTGAG TATCCAACCCGGGCCACGTGCAAACGGCGCCACTGGGTGAG < 41bp 1 0.162083935404745 1 0.200727790594101 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216704 chr19:36216702 nonsynonymous SNV 0.972 5 19 hm5C_associated_SNPs_32173 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36216682-36216709
64251 chr19 49593595 49593595 1 + G T SARC 49593585 + 49593565 49593605 41 TCCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGA TCCTCCAACTCGTGCTGAAACCCGAGAGGATCGCATGGAGA < 41bp 1 0.67988219528404 1 0.330941259860992 experiment 0.640235609431921 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593585 chr19:49593595 nonsynonymous SNV 0.996 1 31 hm5C_associated_SNPs_32174 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593595 49593595 1 + G T SARC 49593586 + 49593566 49593606 41 CCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGAG CCTCCAACTCGTGCTGAAACCCGAGAGGATCGCATGGAGAG < 41bp 1 0.4608052718761 1 0.662714719772339 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593586 chr19:49593595 nonsynonymous SNV 0.996 1 30 hm5C_associated_SNPs_32175 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593595 49593595 1 + G T SARC 49593596 + 49593576 49593616 41 GTGCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGT GTGCTGAAACCCGAGAGGATCGCATGGAGAGGAAAGTATGT < 41bp 1 0.283466501977394 1 0.271042943000793 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593596 chr19:49593595 nonsynonymous SNV 0.996 1 20 hm5C_associated_SNPs_32176 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chr19 49593595 49593595 1 + G T SARC 49593598 + 49593578 49593618 41 GCTGAAACCCGAGAGGAGCGCATGGAGAGGAAAGTATGTCA GCTGAAACCCGAGAGGATCGCATGGAGAGGAAAGTATGTCA < 41bp 1 0.614390934683434 1 0.227098256349564 experiment 0.771218130633132 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593598 chr19:49593595 nonsynonymous SNV 0.996 1 18 hm5C_associated_SNPs_32177 0 0 7 DDX24 POSTAR2 ENCODE chr19:49593587-49593611
64251 chrX 48760292 48760292 1 + G T SARC 48760278 + 48760258 48760298 41 ACACCACAGCAGCTGGGCCCCTCTTCCAGCAGCGGCCGTAT ACACCACAGCAGCTGGGCCCCTCTTCCAGCAGCGTCCGTAT < 41bp 1 0.51418423644025 1 0.138787358999252 experiment 0.9716315271195 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48760278 chrX:48760292 synonymous SNV . 0 35 hm5C_associated_SNPs_32179 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48760259-48760292
64251 chr14 21542353 21542353 1 + A G SARC 21542358 + 21542338 21542378 41 TACAAGGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT TACAAGGCATCAACAGGGACCGGCCAACAGGTCGCCTCAGT < 41bp 1 0.193521368402991 1 0.646280288696289 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21542358 chr14:21542353 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_32180 0 0 1 EIF3H POSTAR2 ENCODE chr14:21542296-21542371
64251 chr1 11333750 11333750 1 + G T SARC 11333762 + 11333742 11333782 41 GCCCTGAGGCCCTGGAGCTTCAGTGCCTCACTCACACCGGT GCCCTGAGTCCCTGGAGCTTCAGTGCCTCACTCACACCGGT < 41bp 1 0.559102882772395 1 0.806934952735901 experiment 0.881794234455209 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11333762 chr1:11333750 nonsynonymous SNV 0.998 5 9 hm5C_associated_SNPs_32188 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:11333719-11333757
64251 chr1 20977162 20977162 1 + G T SARC 20977174 + 20977154 20977194 41 CCTCCTCTGCTCATGGAGGGCAGCCCTGTGATGTCCCTGCA CCTCCTCTTCTCATGGAGGGCAGCCCTGTGATGTCCCTGCA < 41bp 1 0.310009543697489 1 0.243273317813873 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20977174 chr1:20977162 nonsynonymous SNV 0.929 0 9 hm5C_associated_SNPs_32189 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:20977133-20977165
64251 chr1 26772882 26772882 1 + G T SARC 26772901 + 26772881 26772921 41 AGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAAC ATCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAAC < 41bp 1 0.39350738731757 1 0.664387941360474 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772901 chr1:26772882 nonsynonymous SNV 0.997 0 2 hm5C_associated_SNPs_32190 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26772866-26772902
64251 chr1 26772895 26772895 1 + G T SARC 26772901 + 26772881 26772921 41 AGCTGATTGCACAAGCTGTACAGGCCACGAAGAACTACAAC AGCTGATTGCACAATCTGTACAGGCCACGAAGAACTACAAC < 41bp 1 0.395684413325019 1 0.347753524780273 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772901 chr1:26772895 nonsynonymous SNV 0.981 1 15 hm5C_associated_SNPs_32191 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26772866-26772902
64251 chr1 26772895 26772895 1 + G T SARC 26772908 + 26772888 26772928 41 TGCACAAGCTGTACAGGCCACGAAGAACTACAACAAGTAAG TGCACAATCTGTACAGGCCACGAAGAACTACAACAAGTAAG < 41bp 1 0.261087714503888 1 0.440713435411453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHDDS ENSG00000117682 CDS Human protein_coding chr1:26772908 chr1:26772895 nonsynonymous SNV 0.981 1 8 hm5C_associated_SNPs_32192 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26772866-26772902
64251 chr1 27088699 27088699 1 + G T SARC 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCATCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA < 41bp 1 0.223189961145833 1 0.0620279610157013 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088699 nonsynonymous SNV 0.995 3 6 hm5C_associated_SNPs_32193 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:27088679-27088700
64251 chr1 43900108 43900108 1 + G T SARC 43900109 + 43900089 43900129 41 CTGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCGAGTT CTGAGTGTCGCCACCTGCATCAGCTCCTGGTGAGGCGAGTT < 41bp 1 0.146333454539548 1 0.487416982650757 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43900109 chr1:43900108 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_32194 0 0 1 BUD13 POSTAR2 ENCODE chr1:43900047-43900177
64251 chr1 45267573 45267573 1 + G T SARC 45267571 + 45267551 45267591 41 GGTGGGGGATTTTGGGCTGGCAGCCCGGTTGGAGCCTCCGG GGTGGGGGATTTTGGGCTGGCATCCCGGTTGGAGCCTCCGG < 41bp 1 0.140492178337384 1 0.105129182338715 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267571 chr1:45267573 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_32195 0 0 5 EFTUD2 POSTAR2 ENCODE chr1:45267538-45267602
64251 chr1 64095682 64095682 1 + G T SARC 64095685 + 64095665 64095705 41 TGAAGAATATGCAGTTTGCCCTGACCTGAAAGTAGACCTTG TGAAGAATATGCAGTTTTCCCTGACCTGAAAGTAGACCTTG < 41bp 1 0.34485690712007 1 0.0229774713516235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PGM1 ENSG00000079739 CDS Human protein_coding chr1:64095685 chr1:64095682 nonsynonymous SNV 0.997 1 18 hm5C_associated_SNPs_32196 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:64095669-64095699
64251 chr1 95639427 95639427 1 + G T SARC 95639425 + 95639405 95639445 41 CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCG CGCCTGCTTGCAGAGCTTTCCATCCCGTTTGTGAATCAGCG < 41bp 1 0.0874067024583848 1 0.0798802673816681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM56;TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 CDS Human other chr1:95639425 chr1:95639427 nonsynonymous SNV 0.980 3 23 hm5C_associated_SNPs_32197 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:95639398-95639431
64251 chr1 107600255 107600255 1 + G T SARC 107600239 + 107600219 107600259 41 GACCTTCCCTGGAGGGGAGTCGGAGAAACCCCTGGTGCTGT GACCTTCCCTGGAGGGGAGTCGGAGAAACCCCTGGTTCTGT < 41bp 1 0.727706192435493 1 0.893362164497375 experiment 0.544587615129014 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600239 chr1:107600255 synonymous SNV . 0 37 hm5C_associated_SNPs_32198 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:107600231-107600264
64251 chr1 107600255 107600255 1 + G T SARC 107600256 + 107600236 107600276 41 AGTCGGAGAAACCCCTGGTGCTGTCCACCTCGCCTTTTCAC AGTCGGAGAAACCCCTGGTTCTGTCCACCTCGCCTTTTCAC < 41bp 1 0.282239441123716 1 0.468830734491348 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600256 chr1:107600255 synonymous SNV . 0 20 hm5C_associated_SNPs_32199 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:107600231-107600264
64251 chr1 109801253 109801253 1 + G T SARC 109801267 + 109801247 109801287 41 CGTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCA CGTACATCGGGACACCGACGCCCCCGGGGGCCACATCCTCA < 41bp 1 0.0581816484294881 1 0.0624599456787109 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801267 chr1:109801253 nonsynonymous SNV 0.134 3 7 hm5C_associated_SNPs_32200 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801253 109801253 1 + G T SARC 109801268 + 109801248 109801288 41 GTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAA GTACATCGGGACACCGACGCCCCCGGGGGCCACATCCTCAA < 41bp 1 0.294080069966508 1 0.541178166866302 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801268 chr1:109801253 nonsynonymous SNV 0.134 3 6 hm5C_associated_SNPs_32201 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801253 109801253 1 + G T SARC 109801269 + 109801249 109801289 41 TACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAAC TACATCGGGACACCGACGCCCCCGGGGGCCACATCCTCAAC < 41bp 1 0.276323191825927 1 0.451753914356232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801269 chr1:109801253 nonsynonymous SNV 0.134 3 5 hm5C_associated_SNPs_32202 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801253 109801253 1 + G T SARC 109801270 + 109801250 109801290 41 ACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACG ACATCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACG < 41bp 1 0.434011410086911 1 0.510028004646301 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801270 chr1:109801253 nonsynonymous SNV 0.134 3 4 hm5C_associated_SNPs_32203 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801253 109801253 1 + G T SARC 109801271 + 109801251 109801291 41 CAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACGT CATCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACGT < 41bp 1 0.765644083263582 1 0.894338369369507 experiment 0.468711833472837 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801271 chr1:109801253 nonsynonymous SNV 0.134 3 3 hm5C_associated_SNPs_32204 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 151260254 151260254 1 + G T SARC 151260267 + 151260247 151260287 41 CAGTCCAGCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG CAGTCCATCCTGGTGGAGGCCTTCAACAAGATCCTCAACAG < 41bp 1 0.422488647142698 1 0.639838635921478 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151260267 chr1:151260254 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_32206 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:151260234-151260257
64251 chr1 154317164 154317164 1 + G T SARC 154317162 + 154317142 154317182 41 TCATCCCGCTCCGTAGGCAACGGCTTCACCTATCAGGACAA TCATCCCGCTCCGTAGGCAACGTCTTCACCTATCAGGACAA < 41bp 1 0.112415826211282 1 0.0400459766387939 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154317162 chr1:154317164 nonsynonymous SNV 0.583 1 23 hm5C_associated_SNPs_32207 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:154317154-154317180
64251 chr1 154975338 154975338 1 + G T SARC 154975340 + 154975320 154975360 41 ACCGGAGCAGGGCCCCAAGCCCCCGGGCCTGGTGGGGGACG ACCGGAGCAGGGCCCCAATCCCCCGGGCCTGGTGGGGGACG < 41bp 1 0.410495606562348 1 0.562848925590515 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZBTB7B ENSG00000160685 UTR5 Human protein_coding chr1:154975340 chr1:154975338 . . 0 19 hm5C_associated_SNPs_32208 0 0 7 CDC40 POSTAR2 ENCODE chr1:154975224-154975348
64251 chr1 154975338 154975338 1 + G T SARC 154975341 + 154975321 154975361 41 CCGGAGCAGGGCCCCAAGCCCCCGGGCCTGGTGGGGGACGC CCGGAGCAGGGCCCCAATCCCCCGGGCCTGGTGGGGGACGC < 41bp 1 0.6849651948021 1 0.812760293483734 experiment 0.630069610395801 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZBTB7B ENSG00000160685 UTR5 Human protein_coding chr1:154975341 chr1:154975338 . . 0 18 hm5C_associated_SNPs_32209 0 0 7 CDC40 POSTAR2 ENCODE chr1:154975224-154975348
64251 chr1 154975338 154975338 1 + G T SARC 154975342 + 154975322 154975362 41 CGGAGCAGGGCCCCAAGCCCCCGGGCCTGGTGGGGGACGCG CGGAGCAGGGCCCCAATCCCCCGGGCCTGGTGGGGGACGCG < 41bp 1 0.677158042559946 1 0.760273814201355 experiment 0.645683914880108 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZBTB7B ENSG00000160685 UTR5 Human protein_coding chr1:154975342 chr1:154975338 . . 0 17 hm5C_associated_SNPs_32210 0 0 7 CDC40 POSTAR2 ENCODE chr1:154975224-154975348
64251 chr1 154975338 154975338 1 + G T SARC 154975343 + 154975323 154975363 41 GGAGCAGGGCCCCAAGCCCCCGGGCCTGGTGGGGGACGCGC GGAGCAGGGCCCCAATCCCCCGGGCCTGGTGGGGGACGCGC < 41bp 1 0.677323236623865 1 0.731135249137878 experiment 0.64535352675227 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ZBTB7B ENSG00000160685 UTR5 Human protein_coding chr1:154975343 chr1:154975338 . . 0 16 hm5C_associated_SNPs_32211 0 0 7 CDC40 POSTAR2 ENCODE chr1:154975224-154975348
64251 chr1 155036349 155036349 1 + G T SARC 155036368 + 155036348 155036388 41 GGCTCCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAGT GTCTCCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAGT < 41bp 1 0.71506212203024 1 0.691852807998657 experiment 0.56987575593952 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EFNA4 ENSG00000143590;ENSG00000243364;ENSG00000251246 CDS Human other chr1:155036368 chr1:155036349 nonsynonymous SNV 0.909 3 2 hm5C_associated_SNPs_32212 0 0 4 DDX3X POSTAR2 ENCODE chr1:155036307-155036386
64251 chr1 198231735 198231735 1 + G T SARC 198231736 + 198231716 198231756 41 AATGGATGCCAAAGCACGTGCTGATTGCATCAAAGAAATAG AATGGATGCCAAAGCACGTTCTGATTGCATCAAAGAAATAG < 41bp 1 0.228987366667017 1 0.119268089532852 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198231736 chr1:198231735 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_32213 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:198231729-198231739
64251 chr1 198231735 198231735 1 + G T SARC 198231746 + 198231726 198231766 41 AAAGCACGTGCTGATTGCATCAAAGAAATAGATCTTCTTAA AAAGCACGTTCTGATTGCATCAAAGAAATAGATCTTCTTAA < 41bp 1 0.299861514691959 1 0.744122684001923 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198231746 chr1:198231735 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_32214 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:198231729-198231739
64251 chr2 10022869 10022869 1 + G T SARC 10022851 + 10022831 10022871 41 ACAGGTTTGTTGAAGAGGACCATATTCCTTACATAAATGCT ACAGGTTTGTTGAAGAGGACCATATTCCTTACATAAATTCT < 41bp 1 0.047234469809237 1 0.114045560359955 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAF1B ENSG00000115750 CDS Human protein_coding chr2:10022851 chr2:10022869 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_32215 0 0 3 FUS POSTAR2 SRX029329 chr2:10022848-10022869
64251 chr2 46609711 46609711 1 + G T SARC 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACCAGGACTACATCCTGTCGTCAGCCCACAA < 41bp 1 0.127230475915152 1 0.0373284518718719 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609711 nonsynonymous SNV 0.398 1 23 hm5C_associated_SNPs_32216 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831629 chr2:46609700-46609720
64251 chr2 100009508 100009508 1 + G T SARC 100009522 + 100009502 100009542 41 ACATTGGCTGGTTTACCCCTCCTTGTGGCTTATAAAGAAGA ACATTGTCTGGTTTACCCCTCCTTGTGGCTTATAAAGAAGA < 41bp 1 0.0315765818992082 1 0.167004019021988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100009522 chr2:100009508 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_32217 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:100009501-100009554
64251 chr2 241534002 241534002 1 + G T SARC 241533998 + 241533978 241534018 41 GGTAGATGCAGCGGTAGCATCTGAGCTCCTGTCCCAGCTCC GGTAGATGCAGCGGTAGCATCTGATCTCCTGTCCCAGCTCC < 41bp 1 0.592055602594857 1 0.51717609167099 experiment 0.815888794810287 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241533998 chr2:241534002 nonsynonymous SNV 0.765 1 25 hm5C_associated_SNPs_32219 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221661 chr2:241534002-241534003
64251 chr3 10076401 10076401 1 + G T SARC 10076403 + 10076383 10076423 41 TAGAAGAATTTGTTAGTGGCCTGGAGTCTTACATTGAGGAT TAGAAGAATTTGTTAGTGTCCTGGAGTCTTACATTGAGGAT < 41bp 1 0.703676179674675 1 0.469633251428604 experiment 0.59264764065065 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10076403 chr3:10076401 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_32220 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:10076380-10076413
64251 chr3 47451531 47451531 1 + T C SARC 47451521 + 47451501 47451541 41 CAGGAGACCCCCCTGAGGAGCTGCGCAGCCTCCCCCCTGAC CAGGAGACCCCCCTGAGGAGCTGCGCAGCCCCCCCCCTGAC < 41bp 1 0.585971596100153 1 0.521194756031036 experiment 0.828056807799693 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47451521 chr3:47451531 nonsynonymous SNV 0.780 4 31 hm5C_associated_SNPs_32222 0 0 1 PPIG POSTAR2 ENCODE chr3:47451505-47451535
64251 chr3 193361880 193361880 1 + G T SARC 193361862 + 193361842 193361882 41 TCGTTTTGACCAAAGTAGACCTGGCAGAGAAAAATGTAGCC TCGTTTTGACCAAAGTAGACCTGGCAGAGAAAAATGTATCC < 41bp 1 0.387888042973295 1 0.213040500879288 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193361862 chr3:193361880 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_32223 0 0 1 UCHL5 POSTAR2 ENCODE chr3:193361858-193361893
64251 chr4 87666202 87666202 1 + G T SARC 87666208 + 87666188 87666228 41 ATATGCCAGTACCTGCTGCACCTCTGCTCTTACCAGCATAA ATATGCCAGTACCTTCTGCACCTCTGCTCTTACCAGCATAA < 41bp 1 0.0396378770197513 1 0.0444177389144897 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87666208 chr4:87666202 synonymous SNV . 0 15 hm5C_associated_SNPs_32226 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:87666192-87666226
64251 chr4 87666223 87666223 1 + G T SARC 87666208 + 87666188 87666228 41 ATATGCCAGTACCTGCTGCACCTCTGCTCTTACCAGCATAA ATATGCCAGTACCTGCTGCACCTCTGCTCTTACCATCATAA < 41bp 1 0.0358858130947454 1 0.0372444987297058 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87666208 chr4:87666223 nonsynonymous SNV 0.995 4 36 hm5C_associated_SNPs_32227 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:87666192-87666226
64251 chr4 170616781 170616781 1 + G T SARC 170616800 + 170616780 170616820 41 AGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAG ATCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAG < 41bp 1 0.134613999654022 1 0.046945333480835 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170616800 chr4:170616781 nonsynonymous SNV 0.999 5 2 hm5C_associated_SNPs_32228 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:170616760-170616802
64251 chr5 169018122 169018122 1 + G T SARC 169018123 + 169018103 169018143 41 CGAATGTTAGAAAGTTTGAGCTGCGAATGTGAAGCTATTAA CGAATGTTAGAAAGTTTGATCTGCGAATGTGAAGCTATTAA < 41bp 1 0.510096841313788 1 0.140852361917496 experiment 0.979806317372425 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018123 chr5:169018122 nonsynonymous SNV 0.911 2 20 hm5C_associated_SNPs_32231 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:169018099-169018127
64251 chr6 21000521 21000521 1 + G T SARC 21000514 + 21000494 21000534 41 GCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGT GCTTTTCTGCACATACCAGTCCAGTCTTCCTCCGACAGCGT < 41bp 1 0.195365177599816 1 0.0408836901187897 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDKAL1 ENSG00000145996 CDS Human protein_coding chr6:21000514 chr6:21000521 nonsynonymous SNV 0.990 3 28 hm5C_associated_SNPs_32232 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:21000520-21000540
64251 chr6 32945661 32945661 1 + G T SARC 32945671 + 32945651 32945691 41 GAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA GAGGAAAGTATCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA < 41bp 1 0.43919546688632 1 0.368595510721207 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945671 chr6:32945661 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_32233 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:32945531-32945692
64251 chr6 43110019 43110019 1 + G T SARC 43110021 + 43110001 43110041 41 AACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT AACATCAAGCACACGGAGTCCCCCCTCTATGTCGTGGGTAT < 41bp 1 0.0758689357380373 1 0.0590914785861969 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK7 ENSG00000112655 CDS Human protein_coding chr6:43110021 chr6:43110019 nonsynonymous SNV 0.999 2 19 hm5C_associated_SNPs_32234 0 0 1 SND1 POSTAR2 ENCODE chr6:43110002-43110037
64251 chr6 47576988 47576988 1 + G T SARC 47576982 + 47576962 47577002 41 AAAAAAATTCCCTGGATGAACTTAGAGCCCAGATTATTGAA AAAAAAATTCCCTGGATGAACTTAGATCCCAGATTATTGAA < 41bp 1 0.257363215607572 1 0.0611496567726135 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576982 chr6:47576988 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_32235 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr6 64394836 64394836 1 + G T SARC 64394837 + 64394817 64394857 41 GTTGGGTTATTGTGAAGATGCGGAGTCTAATAGGCAGTTGG GTTGGGTTATTGTGAAGATTCGGAGTCTAATAGGCAGTTGG < 41bp 1 0.598441096938737 1 0.772605717182159 experiment 0.803117806122525 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64394837 chr6:64394836 nonsynonymous SNV 0.294 0 20 hm5C_associated_SNPs_32236 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64394693-64394965
64251 chr6 158497760 158497760 1 + G T SARC 158497757 + 158497737 158497777 41 CAAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTG CAAGCGACAAATGCCGCACCCCCTCCTGGACAGACAGGGTG < 41bp 1 0.0426680103416702 1 0.0660877823829651 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497757 chr6:158497760 nonsynonymous SNV 0.823 4 24 hm5C_associated_SNPs_32238 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr6 158497760 158497760 1 + G T SARC 158497758 + 158497738 158497778 41 AAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTGC AAGCGACAAATGCCGCACCCCCTCCTGGACAGACAGGGTGC < 41bp 1 0.0399387249094323 1 0.109879404306412 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497758 chr6:158497760 nonsynonymous SNV 0.823 4 23 hm5C_associated_SNPs_32239 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr7 30640793 30640793 1 + G T SARC 30640781 + 30640761 30640801 41 GAGGAACAGATCCTGGAGATCGATTGCACCATGCTCACCCC GAGGAACAGATCCTGGAGATCGATTGCACCATTCTCACCCC < 41bp 1 0.514891376059734 1 0.442584365606308 experiment 0.970217247880532 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30640781 chr7:30640793 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_32241 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30640782-30640803
64251 chr7 129102865 129102865 1 + G T SARC 129102845 + 129102825 129102865 41 GAGACGCCATGTGAAATCCTCTACCAGGGAATGCTGTACAG GAGACGCCATGTGAAATCCTCTACCAGGGAATGCTGTACAT < 41bp 1 0.32337080076139 1 0.231141626834869 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129102845 chr7:129102865 nonsynonymous SNV 0.996 2 41 hm5C_associated_SNPs_32242 0 0 2 PPIG POSTAR2 ENCODE chr7:129102813-129102870
64251 chr8 22054871 22054871 1 + G T SARC 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCTCG < 41bp 1 0.14831527641047 1 0.168311834335327 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054871 nonsynonymous SNV 0.996 3 39 hm5C_associated_SNPs_32243 0 0 1 ZNF622 POSTAR2 ENCODE chr8:22054803-22054881
64251 chr9 96427994 96427994 1 + G T SARC 96427976 + 96427956 96427996 41 CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACGAGCC CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACGATCC < 41bp 1 0.150847360246623 1 0.0620793402194977 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96427976 chr9:96427994 nonsynonymous SNV 0.373 4 39 hm5C_associated_SNPs_32246 0 0 1 AGGF1 POSTAR2 ENCODE chr9:96427969-96427995
64251 chr9 100425261 100425261 1 + G T SARC 100425251 + 100425231 100425271 41 AAAAGGTTTCATGAAGTCTTCAAAACCCTAGCTGAAAGTGA AAAAGGTTTCATGAAGTCTTCAAAACCCTATCTGAAAGTGA < 41bp 1 0.233498005095878 1 0.428771585226059 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100425251 chr9:100425261 nonsynonymous SNV 0.993 1 31 hm5C_associated_SNPs_32247 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:100425241-100425295
64251 chr9 131830105 131830105 1 + G T SARC 131830119 + 131830099 131830139 41 CCTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG CCTGCGTCCCGAGACCTGGGCCACAACACGGCTGGAGCTGG < 41bp 1 0.178025605116727 1 0.0677765309810638 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830119 chr9:131830105 synonymous SNV . 0 7 hm5C_associated_SNPs_32248 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr9 131830105 131830105 1 + G T SARC 131830120 + 131830100 131830140 41 CTGCGGCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGA CTGCGTCCCGAGACCTGGGCCACAACACGGCTGGAGCTGGA < 41bp 1 0.379946760289327 1 0.227197021245956 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830120 chr9:131830105 synonymous SNV . 0 6 hm5C_associated_SNPs_32249 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830095-131830146
64251 chr9 134322024 134322024 1 + G T SARC 134322022 + 134322002 134322042 41 TACATACCATGACATGCTTCCTGCTTTTGTAAGTCTTCAGA TACATACCATGACATGCTTCCTTCTTTTGTAAGTCTTCAGA < 41bp 1 0.0357070858839287 1 0.0596597790718079 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134322022 chr9:134322024 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_32250 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr9:134322017-134322038
64251 chr9 135926300 135926300 1 + G T SARC 135926282 + 135926262 135926302 41 AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCAGCC AGGATGAGGAGGTGCCCAAGCAGCCACTGGAGGCTGCATCC < 41bp 1 0.680427748298324 1 0.486481696367264 experiment 0.639144503403351 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926282 chr9:135926300 nonsynonymous SNV 0.989 0 39 hm5C_associated_SNPs_32251 0 0 4 METAP2 POSTAR2 ENCODE chr9:135926247-135926316
64251 chr9 135926300 135926300 1 + G T SARC 135926295 + 135926275 135926315 41 GCCCAAGCAGCCACTGGAGGCTGCAGCCCAGACGTGGAGGA GCCCAAGCAGCCACTGGAGGCTGCATCCCAGACGTGGAGGA < 41bp 1 0.762777548182346 1 0.460748434066772 experiment 0.474444903635308 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926295 chr9:135926300 nonsynonymous SNV 0.989 0 26 hm5C_associated_SNPs_32252 0 0 4 METAP2 POSTAR2 ENCODE chr9:135926247-135926316
64251 chr9 135926300 135926300 1 + G T SARC 135926303 + 135926283 135926323 41 AGCCACTGGAGGCTGCAGCCCAGACGTGGAGGAGAGTCTGC AGCCACTGGAGGCTGCATCCCAGACGTGGAGGAGAGTCTGC < 41bp 1 0.59433819079385 1 0.433247298002243 experiment 0.8113236184123 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926303 chr9:135926300 nonsynonymous SNV 0.989 0 18 hm5C_associated_SNPs_32253 0 0 4 METAP2 POSTAR2 ENCODE chr9:135926247-135926316
64251 chr10 17271832 17271832 1 + G T SARC 17271847 + 17271827 17271867 41 GAGCAGCTCAAGGGCCAAGGCAAGTCGCGCCTGGGGGACCT GAGCATCTCAAGGGCCAAGGCAAGTCGCGCCTGGGGGACCT < 41bp 1 0.711490185715353 1 0.368665277957916 experiment 0.577019628569294 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271847 chr10:17271832 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_32254 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:17271769-17271840
64251 chr10 51584777 51584777 1 + G T SARC 51584778 + 51584758 51584798 41 AAAAGGTTGGAGATCAAGAGCTTCCTGATCAAGATGAGATG AAAAGGTTGGAGATCAAGATCTTCCTGATCAAGATGAGATG < 41bp 1 0.138215242691104 1 0.0619297623634338 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCOA4 ENSG00000138293 CDS Human other chr10:51584778 chr10:51584777 nonsynonymous SNV . 0 20 hm5C_associated_SNPs_32255 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:51584741-51584781
64251 chr10 73992844 73992844 1 + G T SARC 73992860 + 73992840 73992880 41 AGCAGCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTGC AGCATCTGCTGGGATTCACCCCCTCTTCAGGTTGATACTGC < 41bp 1 0.159533095612423 1 0.123084545135498 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73992860 chr10:73992844 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_32256 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:73992818-73992966
64251 chr10 105172947 105172947 1 + G T SARC 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACATCCTGGACGCCCACTCACCCGACTCTCTTGCC < 41bp 1 0.0994262386471392 1 0.0869990289211273 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172947 nonsynonymous SNV 0.773 0 10 hm5C_associated_SNPs_32257 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr10 126505161 126505161 1 + G T SARC 126505159 + 126505139 126505179 41 TTACAGAAATCCATAACCATCAGCCTTGTTCAAAACTTTTT TTACAGAAATCCATAACCATCATCCTTGTTCAAAACTTTTT < 41bp 1 0.0889759440942272 1 0.0500324070453644 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126505159 chr10:126505161 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_32259 0 0 1 PRPF8 POSTAR2 ENCODE chr10:126505161-126505220
64251 chr11 34129827 34129827 1 + G T SARC 34129843 + 34129823 34129863 41 AGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG AGTATCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG < 41bp 1 0.169011768533011 1 0.146189719438553 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129843 chr11:34129827 nonsynonymous SNV 0.928 0 5 hm5C_associated_SNPs_32260 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34129799-34129855
64251 chr11 61111363 61111363 1 + G T SARC 61111346 + 61111326 61111366 41 AGATGCTGAAACCACTGCAGCAGCCTGGCCTAACGTGGCTG AGATGCTGAAACCACTGCAGCAGCCTGGCCTAACGTGTCTG < 41bp 1 0.218004019466202 1 0.303277313709259 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61111346 chr11:61111363 nonsynonymous SNV 0.151 0 38 hm5C_associated_SNPs_32261 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:61111353-61111381
64251 chr11 61897289 61897289 1 + G T SARC 61897299 + 61897279 61897319 41 AGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT AGCCAGCTGATCTCCCGACGCCTCCGCAGCAAGGACAGTGT < 41bp 1 0.0451564245244923 1 0.178869098424911 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897299 chr11:61897289 nonsynonymous SNV 0.771 0 11 hm5C_associated_SNPs_32262 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr11 65161555 65161555 1 + G T SARC 65161556 + 65161536 65161576 41 GGAACGTGTTCTTCCCAAAGCGGCGGGAGCTCCAGGTGAGG GGAACGTGTTCTTCCCAAATCGGCGGGAGCTCCAGGTGAGG < 41bp 1 0.749194494696898 1 0.773431062698364 experiment 0.501611010606205 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65161556 chr11:65161555 nonsynonymous SNV 0.951 1 20 hm5C_associated_SNPs_32263 0 0 4 DDX24 POSTAR2 ENCODE chr11:65161484-65161571
64251 chr11 67047153 67047153 1 + G T SARC 67047163 + 67047143 67047183 41 AGAAGCAGGTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC AGAAGCAGGTTCCTCCGGATCTCTTCCAGGTGTGTGCCTCC < 41bp 1 0.161935335206759 1 0.223228365182877 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047163 chr11:67047153 synonymous SNV . 0 11 hm5C_associated_SNPs_32264 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr11 67052433 67052433 1 + G T SARC 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCGAGTGTCGGGGCGAGGGCGAGGCCCCGGTAAG < 41bp 1 0.676143032012829 1 0.924732804298401 experiment 0.647713935974343 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052433 nonsynonymous SNV 0.984 4 15 hm5C_associated_SNPs_32265 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052433 67052433 1 + G T SARC 67052450 + 67052430 67052470 41 GTGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG GTGTCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG < 41bp 1 0.479092669168646 1 0.676627993583679 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052450 chr11:67052433 nonsynonymous SNV 0.984 4 4 hm5C_associated_SNPs_32266 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052433 67052433 1 + G T SARC 67052451 + 67052431 67052471 41 TGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG TGTCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG < 41bp 1 0.732244020538719 1 0.818022131919861 experiment 0.535511958922562 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052451 chr11:67052433 nonsynonymous SNV 0.984 4 3 hm5C_associated_SNPs_32267 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052433 67052433 1 + G T SARC 67052452 + 67052432 67052472 41 GGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG GTCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG < 41bp 1 0.491920709975028 1 0.707907617092133 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052452 chr11:67052433 nonsynonymous SNV 0.984 4 2 hm5C_associated_SNPs_32268 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052433 67052433 1 + G T SARC 67052453 + 67052433 67052473 41 GCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG TCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG < 41bp 1 0.72853842505008 1 0.553720474243164 experiment 0.542923149899841 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052453 chr11:67052433 nonsynonymous SNV 0.984 4 1 hm5C_associated_SNPs_32269 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 70275269 70275269 1 + G T SARC 70275262 + 70275242 70275282 41 GGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG GGAGAGAGCCCAGCGGATGGCCAAGGATCGGCAGGAGCAGG < 41bp 1 0.424277428339373 1 0.323982119560242 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275262 chr11:70275269 nonsynonymous SNV 0.986 0 28 hm5C_associated_SNPs_32270 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70275254-70275275
64251 chr11 74329691 74329691 1 + G T SARC 74329711 + 74329691 74329731 41 GCCAACAATGAGCTGACCACCAATGGTCATGGCCCACCTGC TCCAACAATGAGCTGACCACCAATGGTCATGGCCCACCTGC < 41bp 1 0.628021142049286 1 0.389350652694702 experiment 0.743957715901429 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329711 chr11:74329691 nonsynonymous SNV 0.816 0 1 hm5C_associated_SNPs_32271 0 0 1 UCHL5 POSTAR2 ENCODE chr11:74329643-74329742
64251 chr11 130003567 130003567 1 + G T SARC 130003563 + 130003543 130003583 41 TGATTGAAGAAAGGAGGAACCAAAGCCTCTCTCTGCTCTAC TGATTGAAGAAAGGAGGAACCAAATCCTCTCTCTGCTCTAC < 41bp 1 0.291257420357697 1 0.411921560764313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130003563 chr11:130003567 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_32272 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:130003560-130003587
64251 chr11 130003567 130003567 1 + G T SARC 130003575 + 130003555 130003595 41 GGAGGAACCAAAGCCTCTCTCTGCTCTACAAAGTACCTTAT GGAGGAACCAAATCCTCTCTCTGCTCTACAAAGTACCTTAT < 41bp 1 0.430258540428316 1 0.632368803024292 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130003575 chr11:130003567 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_32273 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:130003560-130003587
64251 chr12 6344439 6344439 1 + G T SARC 6344427 + 6344407 6344447 41 GTCCAGGAGTTTTACAAGGACACCTACAACAAGCTGAAAAC GTCCAGGAGTTTTACAAGGACACCTACAACAATCTGAAAAC < 41bp 1 0.439189957809845 1 0.249540030956268 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD9 ENSG00000010278 CDS Human protein_coding chr12:6344427 chr12:6344439 nonsynonymous SNV 0.765 1 33 hm5C_associated_SNPs_32274 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:6344415-6344439
64251 chr12 7027294 7027294 1 + G T SARC 7027310 + 7027290 7027330 41 GGTGGCTTTGCCCCCAATATCCTGGAGAACAGTGAAGGTGA GGTGTCTTTGCCCCCAATATCCTGGAGAACAGTGAAGGTGA < 41bp 1 0.45456788750393 1 0.561674535274506 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENO2 ENSG00000111674 CDS Human protein_coding chr12:7027310 chr12:7027294 nonsynonymous SNV 0.997 3 5 hm5C_associated_SNPs_32275 0 0 7 BUD13 POSTAR2 ENCODE chr12:7027277-7027324
64251 chr12 53343226 53343226 1 - G T SARC 53343242 - 53343222 53343262 41 TCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGCGGTC TCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGAGGTC < 41bp 1 0.619704667917036 1 0.810801386833191 experiment 0.760590664165927 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53343242 chr12:53343226 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_32277 0 0 2 PRPF8 POSTAR2 ENCODE chr12:53343204-53343277
64251 chr12 53343226 53343226 1 - G T SARC 53343243 - 53343223 53343263 41 CTCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGCGGT CTCCAGGCTCCTCACTCTGTCCAGGTAAGAGGCCAGGAGGT < 41bp 1 0.478013961725789 1 0.778818190097809 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KRT18 ENSG00000111057 CDS Human protein_coding chr12:53343243 chr12:53343226 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_32278 0 0 2 PRPF8 POSTAR2 ENCODE chr12:53343204-53343277
64251 chr12 53433481 53433481 1 + G T SARC 53433478 + 53433458 53433498 41 CAAAGAAACCTGAGGAAAATCCAGCTTCCGTAAGTGTTGAA CAAAGAAACCTGAGGAAAATCCATCTTCCGTAAGTGTTGAA < 41bp 1 0.0814255886006697 1 0.0894257724285126 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53433478 chr12:53433481 nonsynonymous SNV 0.948 1 24 hm5C_associated_SNPs_32279 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:53433478-53433499
64251 chr12 93968582 93968582 1 + G T SARC 93968564 + 93968544 93968584 41 AAAAGAGGCACCAGAAGGAACTTTCTTGATTAGAGATAGCT AAAAGAGGCACCAGAAGGAACTTTCTTGATTAGAGATATCT < 41bp 1 0.066870898932359 1 0.0536777079105377 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968564 chr12:93968582 nonsynonymous SNV 0.996 5 39 hm5C_associated_SNPs_32280 0 0 2 IGF2BP1 POSTAR2 ENCODE chr12:93968582-93968701
64251 chr12 104340683 104340683 1 + G T SARC 104340684 + 104340664 104340704 41 GAGATAGAATAGAAAGAATGCTTCGCCTCAGTTTGAACATT GAGATAGAATAGAAAGAATTCTTCGCCTCAGTTTGAACATT < 41bp 1 0.234207341947585 1 0.0898725092411041 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340684 chr12:104340683 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_32281 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104340656-104340696
64251 chr12 104340683 104340683 1 + G T SARC 104340690 + 104340670 104340710 41 GAATAGAAAGAATGCTTCGCCTCAGTTTGAACATTGACCCT GAATAGAAAGAATTCTTCGCCTCAGTTTGAACATTGACCCT < 41bp 1 0.493310331241787 1 0.133467078208923 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340690 chr12:104340683 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_32282 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104340656-104340696
64251 chr12 104340683 104340683 1 + G T SARC 104340692 + 104340672 104340712 41 ATAGAAAGAATGCTTCGCCTCAGTTTGAACATTGACCCTGA ATAGAAAGAATTCTTCGCCTCAGTTTGAACATTGACCCTGA < 41bp 1 0.277006624032491 1 0.251530766487122 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340692 chr12:104340683 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_32283 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104340656-104340696
64251 chr12 104340683 104340683 1 + G T SARC 104340701 + 104340681 104340721 41 ATGCTTCGCCTCAGTTTGAACATTGACCCTGATGCAAAGGT ATTCTTCGCCTCAGTTTGAACATTGACCCTGATGCAAAGGT < 41bp 1 0.111642151332323 1 0.169773191213608 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104340701 chr12:104340683 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_32284 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104340656-104340696
64251 chr12 125603235 125603235 1 + G T SARC 125603220 + 125603200 125603240 41 TGTGGAACTGGATGGTGTCCCTTCTGGCCACAGGAGCGGCC TGTGGAACTGGATGGTGTCCCTTCTGGCCACAGGATCGGCC < 41bp 1 0.293313991140903 1 0.0455112755298615 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AACS ENSG00000081760 CDS Human protein_coding chr12:125603220 chr12:125603235 nonsynonymous SNV 0.006 1 36 hm5C_associated_SNPs_32285 0 0 2 RPS3 POSTAR2 ENCODE chr12:125603225-125603312
64251 chr12 132334398 132334398 1 + G T SARC 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCCGCTCCCCGTCTCCGACTTC < 41bp 1 0.133528138527841 1 0.0569112300872803 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334398 nonsynonymous SNV 0.935 3 25 hm5C_associated_SNPs_32286 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr14 58669631 58669631 1 + G T SARC 58669641 + 58669621 58669661 41 GATAAAAAGAGCTGGGATGCCTAAGGTATTTAAAAAAAAAT GATAAAAAGATCTGGGATGCCTAAGGTATTTAAAAAAAAAT < 41bp 1 0.376259971540845 1 0.50484424829483 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58669641 chr14:58669631 nonsynonymous SNV 0.992 2 11 hm5C_associated_SNPs_32287 0 0 1 DDX3X POSTAR2 ENCODE chr14:58669572-58669646
64251 chr14 64628970 64628970 1 + G T SARC 64628971 + 64628951 64628991 41 ACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATA ACAACCTGGCAGAGATCCTTCCCCCAGCCCTGCAGGACATA < 41bp 1 0.0949674862316667 1 0.078144758939743 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64628971 chr14:64628970 synonymous SNV . 0 20 hm5C_associated_SNPs_32288 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64628937-64628975
64251 chr14 64990076 64990076 1 + G T SARC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGATCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC < 41bp 1 0.596603630214285 1 0.560886204242706 experiment 0.806792739571429 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990076 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_32289 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64990042-64990078
64251 chr15 69714743 69714743 1 + G T SARC 69714749 + 69714729 69714769 41 GTCAGAAAAGAGAAGCTATGCCCAATCCAAAGACTTCTTCT GTCAGAAAAGAGAATCTATGCCCAATCCAAAGACTTCTTCT < 41bp 1 0.463755096552323 1 0.0466523766517639 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69714749 chr15:69714743 nonsynonymous SNV 0.994 0 15 hm5C_associated_SNPs_32295 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:69714691-69714751
64251 chr15 90771578 90771578 1 + G T SARC 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TTGCTCTACCGTCACCGGAACAGCATGAAAGTCTTCCTGAA < 41bp 1 0.566921364419975 1 0.720015645027161 experiment 0.86615727116005 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771578 synonymous SNV . 0 12 hm5C_associated_SNPs_32296 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr15 100215645 100215645 1 + G T SARC 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC CACTACAGACCTCACAGTGCCAAATGGATCTGGAAGCAGTC < 41bp 1 0.27714192232468 1 0.414067476987839 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215645 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_32297 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr15:100215624-100215648
64251 chr16 723007 723007 1 + G T SARC 723004 + 722984 723024 41 GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT GCCCGAAGGTGTCGCGGTGTCTGTCCCATCACCGGCCGAGT < 41bp 1 0.345405798414215 1 0.219680368900299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723004 chr16:723007 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_32298 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:722972-723010
64251 chr16 31196311 31196311 1 + G T SARC 31196312 + 31196292 31196332 41 AGTGGTGGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCA AGTGGTGGTGGCAGTGGTGTCGGTTATGGCAATCAAGACCA < 41bp 1 0.689074731742853 1 0.451544374227524 experiment 0.621850536514293 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FUS ENSG00000089280 CDS Human protein_coding chr16:31196312 chr16:31196311 nonsynonymous SNV 0.764 4 20 hm5C_associated_SNPs_32299 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31196296-31196319
64251 chr16 67578995 67578995 1 + G T SARC 67578992 + 67578972 67579012 41 CAGTATGGTGCCCGCCTCTCCCTGCGCCAGCCAGGCTTGGC CAGTATGGTGCCCGCCTCTCCCTTCGCCAGCCAGGCTTGGC < 41bp 1 0.0240598369114881 1 0.0818909704685211 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578992 chr16:67578995 synonymous SNV . 0 24 hm5C_associated_SNPs_32301 0 0 2 LSM11 POSTAR2 ENCODE chr16:67578976-67579021
64251 chr16 70589052 70589052 1 + G T SARC 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC ATCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC < 41bp 1 0.304062013472657 1 0.115124017000198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589052 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_32302 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr17 4720022 4720022 1 + G T SARC 4720020 + 4720000 4720040 41 TTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAA TTATCACCAAGGACTGGGTGCATCTGGACCGGCCTTTCGAA < 41bp 1 0.101630794797817 1 0.0488791465759277 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4720020 chr17:4720022 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_32303 0 0 1 PPIG POSTAR2 ENCODE chr17:4720009-4720039
64251 chr17 8172162 8172162 1 + G T SARC 8172177 + 8172157 8172197 41 GGAGTGCGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG GGAGTTCGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG < 41bp 1 0.520956061890432 1 0.753688454627991 experiment 0.958087876219137 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172177 chr17:8172162 nonsynonymous SNV 0.170 1 6 hm5C_associated_SNPs_32304 0 0 2 EIF3H POSTAR2 ENCODE chr17:8172078-8172166
64251 chr17 21731311 21731311 1 + G T SARC 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGTCGGTACTCTTTCTGACTACAACATCC < 41bp 1 0.148306333090187 1 0.126112043857574 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731311 nonsynonymous SNV 0.976 0 15 hm5C_associated_SNPs_32305 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr17 52991185 52991185 1 + G T SARC 52991196 + 52991176 52991216 41 TTAAGAAAGGCGTTCAGTTTCCTCCCTCAGAAGCAGAGGCT TTAAGAAAGTCGTTCAGTTTCCTCCCTCAGAAGCAGAGGCT < 41bp 1 0.148650872984997 1 0.0515132248401642 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52991196 chr17:52991185 nonsynonymous SNV 0.998 4 10 hm5C_associated_SNPs_32307 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:52991171-52991189
64251 chr17 57287555 57287555 1 + G T SARC 57287568 + 57287548 57287588 41 GAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACG GAGATCTTCGTTGTGGGAATCTTCGGCAAGACGGCTCTACG < 41bp 1 0.459094344881141 1 0.635786652565002 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287568 chr17:57287555 nonsynonymous SNV 0.997 3 8 hm5C_associated_SNPs_32308 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:57287535-57287557
64251 chr17 57771127 57771127 1 + G T SARC 57771132 + 57771112 57771152 41 GCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGG GCAGGACCCAGTGTTTCCGTCCCTCCCCAGGCACCTTTTGG < 41bp 1 0.0332625157441174 1 0.0767486393451691 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57771132 chr17:57771127 nonsynonymous SNV 0.999 1 16 hm5C_associated_SNPs_32309 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:57771099-57771134
64251 chr17 62223718 62223718 1 + G T SARC 62223702 + 62223682 62223722 41 TGTGTGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGA TGTGTGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCTCCGA < 41bp 1 0.274341709009392 1 0.0450522005558014 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223702 chr17:62223718 . . 0 37 hm5C_associated_SNPs_32310 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223706 + 62223686 62223726 41 TGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTT TGTCGTTGGCGACGCGCTGTCTTTGAGCCCCCTCCGAGCTT < 41bp 1 0.307013736488637 1 0.0560866892337799 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223706 chr17:62223718 . . 0 33 hm5C_associated_SNPs_32311 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223713 + 62223693 62223733 41 GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG GGCGACGCGCTGTCTTTGAGCCCCCTCCGAGCTTCCTCGTG < 41bp 1 0.128779562011319 1 0.0448211133480072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223713 chr17:62223718 . . 0 26 hm5C_associated_SNPs_32312 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223714 + 62223694 62223734 41 GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG GCGACGCGCTGTCTTTGAGCCCCCTCCGAGCTTCCTCGTGG < 41bp 1 0.168886173031979 1 0.0599079132080078 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223714 chr17:62223718 . . 0 25 hm5C_associated_SNPs_32313 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223715 + 62223695 62223735 41 CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC CGACGCGCTGTCTTTGAGCCCCCTCCGAGCTTCCTCGTGGC < 41bp 1 0.0551994139057244 1 0.0331384837627411 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223715 chr17:62223718 . . 0 24 hm5C_associated_SNPs_32314 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223716 + 62223696 62223736 41 GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG GACGCGCTGTCTTTGAGCCCCCTCCGAGCTTCCTCGTGGCG < 41bp 1 0.0333584690997475 1 0.0497008562088013 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223716 chr17:62223718 . . 0 23 hm5C_associated_SNPs_32315 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CGCTGTCTTTGAGCCCCCTCCGAGCTTCCTCGTGGCGCCGG < 41bp 1 0.629094854955484 1 0.604879856109619 experiment 0.741810290089031 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223718 . . 0 19 hm5C_associated_SNPs_32316 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223727 + 62223707 62223747 41 TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA TTTGAGCCCCCTCCGAGCTTCCTCGTGGCGCCGGGGGTCAA < 41bp 1 0.216405234060655 1 0.245173364877701 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223727 chr17:62223718 . . 0 12 hm5C_associated_SNPs_32317 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223728 + 62223708 62223748 41 TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT TTGAGCCCCCTCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT < 41bp 1 0.597556606547794 1 0.316085577011108 experiment 0.804886786904412 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223728 chr17:62223718 . . 0 11 hm5C_associated_SNPs_32318 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223718 62223718 1 + G T SARC 62223735 + 62223715 62223755 41 CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC CCCTCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC < 41bp 1 0.641344359204468 1 0.107411712408066 experiment 0.717311281591063 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223735 chr17:62223718 . . 0 4 hm5C_associated_SNPs_32319 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 64685094 64685094 1 + G T SARC 64685113 + 64685093 64685133 41 AGGTGAGTACTACAACGTACCCATTCCGGAAGGGGACGAGG ATGTGAGTACTACAACGTACCCATTCCGGAAGGGGACGAGG < 41bp 1 0.0190773600776972 1 0.0385941863059998 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64685113 chr17:64685094 nonsynonymous SNV 0.994 3 2 hm5C_associated_SNPs_32320 0 0 7 GRWD1 POSTAR2 ENCODE chr17:64685087-64685186
64251 chr17 67515557 67515557 1 + G T SARC 67515562 + 67515542 67515582 41 CTGTCACCTTTTATGGCGCACTGTTTCGGGAGGTAGGTGAC CTGTCACCTTTTATGTCGCACTGTTTCGGGAGGTAGGTGAC < 41bp 1 0.171302539098084 1 0.0311522483825684 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP2K6 ENSG00000108984 CDS Human protein_coding chr17:67515562 chr17:67515557 nonsynonymous SNV 0.980 3 16 hm5C_associated_SNPs_32321 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:67515544-67515573
64251 chr17 73058322 73058322 1 + G T SARC 73058313 + 73058293 73058333 41 AATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAA AATAATTCTACCAATGGCATCGTCATAGATCCGAGCGAAAA < 41bp 1 0.306159666159146 1 0.495502591133118 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73058313 chr17:73058322 nonsynonymous SNV 0.995 2 30 hm5C_associated_SNPs_32322 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73058296-73058323
64251 chr17 73481968 73481968 1 + G T SARC 73481976 + 73481956 73481996 41 TGTGGAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTCC TGTGGAGAAGCATCTTCCTCCACCACAGTAACCGCTGCTCC < 41bp 1 0.619120880792507 1 0.395333826541901 experiment 0.761758238414987 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73481976 chr17:73481968 nonsynonymous SNV 0.994 1 13 hm5C_associated_SNPs_32323 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73481959-73481983
64251 chr17 73814852 73814852 1 + G T SARC 73814851 + 73814831 73814871 41 GTCCCCGGCATGAATGCAAACGCTCTGCCCTTCTACCCCAC GTCCCCGGCATGAATGCAAACTCTCTGCCCTTCTACCCCAC < 41bp 1 0.323335954877482 1 0.120396465063095 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73814851 chr17:73814852 nonsynonymous SNV 0.985 3 22 hm5C_associated_SNPs_32324 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:73814849-73814872
64251 chr17 73816122 73816122 1 + G T SARC 73816120 + 73816100 73816140 41 TCTCCTCGCATTTCCTGCAGCAGCCCCAGGGCCACCTGAGT TCTCCTCGCATTTCCTGCAGCATCCCCAGGGCCACCTGAGT < 41bp 1 0.029776955186529 1 0.0491118133068085 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73816120 chr17:73816122 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_32325 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:73816108-73816136
64251 chr17 78087043 78087043 1 + G T SARC 78087058 + 78087038 78087078 41 AGCGAGCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT AGCGATCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT < 41bp 1 0.652299956753174 1 0.432698994874954 experiment 0.695400086493652 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78087058 chr17:78087043 nonsynonymous SNV 0.874 1 6 hm5C_associated_SNPs_32326 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:78087040-78087060
64251 chr18 12718626 12718626 1 + G T SARC 12718624 + 12718604 12718644 41 CATATCAGCGTAATGATCTGCAGCTTCGTAGGTATGTTTCT CATATCAGCGTAATGATCTGCATCTTCGTAGGTATGTTTCT < 41bp 1 0.149083842492486 1 0.0665208399295807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718624 chr18:12718626 nonsynonymous SNV 0.878 4 23 hm5C_associated_SNPs_32327 0 0 1 PRPF8 POSTAR2 ENCODE chr18:12718622-12718671
64251 chr18 19423134 19423134 1 + G T SARC 19423125 + 19423105 19423145 41 TGGATATCCAGAATGTGAACCAACAAACTGCCCTACACCTT TGGATATCCAGAATGTGAACCAACAAACTTCCCTACACCTT < 41bp 1 0.4441356136949 1 0.339542984962463 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19423125 chr18:19423134 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_32328 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:19423104-19423137
64251 chr18 59855030 59855030 1 + G T SARC 59855039 + 59855019 59855059 41 TTGATGCGATCGCTGCTCAGCTGTTGCGCGATCAATACTTG TTGATGCGATCTCTGCTCAGCTGTTGCGCGATCAATACTTG < 41bp 1 0.207345106783216 1 0.118531316518784 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59855039 chr18:59855030 nonsynonymous SNV 0.999 3 12 hm5C_associated_SNPs_32330 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:59855012-59855036
64251 chr19 1278985 1278985 1 + G T SARC 1278968 + 1278948 1278988 41 GACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCT GACCTGTTGCCACCTGCACCCACCGCTGGACCATGCATCCT < 41bp 1 0.696182345956937 1 0.14361959695816 experiment 0.607635308086127 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278968 chr19:1278985 nonsynonymous SNV 0.004 1 38 hm5C_associated_SNPs_32331 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1278979-1279031
64251 chr19 3574367 3574367 1 + G T SARC 3574378 + 3574358 3574398 41 AACGACGCAGCCCGGTTCTGCAGCCGGTGAAGAAACGCGGC AACGACGCATCCCGGTTCTGCAGCCGGTGAAGAAACGCGGC < 41bp 1 0.54805357343425 1 0.517544507980347 experiment 0.903892853131501 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMG20B ENSG00000064961;ENSG00000064961 exonic;splicing Human other chr19:3574378 chr19:3574367 nonsynonymous SNV 0.006 1 10 hm5C_associated_SNPs_32333 0 0 1 DDX59 POSTAR2 ENCODE chr19:3574259-3574371
64251 chr19 4268629 4268629 1 + G T SARC 4268640 + 4268620 4268660 41 TGACGCCTGGCGCGTCCTCCCTGAGCCAACTGGGTGCATAC TGACGCCTGTCGCGTCCTCCCTGAGCCAACTGGGTGCATAC < 41bp 1 0.751593441388931 1 0.358704626560211 experiment 0.496813117222138 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4268640 chr19:4268629 nonsynonymous SNV 0.001 1 10 hm5C_associated_SNPs_32334 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:4268629-4268661
64251 chr19 4793201 4793201 1 + G T SARC 4793215 + 4793195 4793235 41 CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA CTACGTTCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA < 41bp 1 0.0820618397062012 1 0.0852966010570526 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793215 chr19:4793201 synonymous SNV . 0 7 hm5C_associated_SNPs_32335 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4793141-4793239
64251 chr19 8528387 8528387 1 + G T SARC 8528388 + 8528368 8528408 41 GCTTCCTCCAAAGGGATGTGCGTAAGTATCGTCTAGTTACT GCTTCCTCCAAAGGGATGTTCGTAAGTATCGTCTAGTTACT < 41bp 1 0.439198164492151 1 0.15023735165596 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8528388 chr19:8528387 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_32336 0 0 13 AARS POSTAR2 ENCODE chr19:8528383-8528389
64251 chr19 14020758 14020758 1 + G T SARC 14020742 + 14020722 14020762 41 GGCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCA GGCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAATCTCA < 41bp 1 0.396553850510934 1 0.747779428958893 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020742 chr19:14020758 nonsynonymous SNV 0.991 3 37 hm5C_associated_SNPs_32337 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020758 14020758 1 + G T SARC 14020743 + 14020723 14020763 41 GCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAA GCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAATCTCAA < 41bp 1 0.251082492595212 1 0.502770245075226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020743 chr19:14020758 nonsynonymous SNV 0.991 3 36 hm5C_associated_SNPs_32338 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020758 14020758 1 + G T SARC 14020744 + 14020724 14020764 41 CTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAA CTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAATCTCAAA < 41bp 1 0.14952183988149 1 0.320963621139526 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020744 chr19:14020758 nonsynonymous SNV 0.991 3 35 hm5C_associated_SNPs_32339 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020758 14020758 1 + G T SARC 14020745 + 14020725 14020765 41 TTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAAG TTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAATCTCAAAG < 41bp 1 0.467297559346137 1 0.4886314868927 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020745 chr19:14020758 nonsynonymous SNV 0.991 3 34 hm5C_associated_SNPs_32340 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14030649 14030649 1 + G T SARC 14030636 + 14030616 14030656 41 CGACTGGCCACCCAGGCTTCCCCCCAATCCAGGGCCTGGAG CGACTGGCCACCCAGGCTTCCCCCCAATCCAGGTCCTGGAG < 41bp 1 0.0657523039384859 1 0.034568727016449 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030636 chr19:14030649 nonsynonymous SNV 0.948 4 34 hm5C_associated_SNPs_32341 0 0 5 EFTUD2 POSTAR2 ENCODE chr19:14030628-14030672
64251 chr19 14561767 14561767 1 + G T SARC 14561750 + 14561730 14561770 41 CCAACCAGAAGCTGGGGCTGCTGCGGGAGGCTCTGGAGCGG CCAACCAGAAGCTGGGGCTGCTGCGGGAGGCTCTGGATCGG < 41bp 1 0.608945931882472 1 0.447457283735275 experiment 0.782108136235055 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561750 chr19:14561767 nonsynonymous SNV 0.980 0 38 hm5C_associated_SNPs_32342 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr19:14561738-14561772
64251 chr19 14561767 14561767 1 + G T SARC 14561760 + 14561740 14561780 41 GCTGGGGCTGCTGCGGGAGGCTCTGGAGCGGAGACTTGGGG GCTGGGGCTGCTGCGGGAGGCTCTGGATCGGAGACTTGGGG < 41bp 1 0.255673244945637 1 0.279622942209244 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561760 chr19:14561767 nonsynonymous SNV 0.980 0 28 hm5C_associated_SNPs_32343 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr19:14561738-14561772
64251 chr19 14562791 14562791 1 + G T SARC 14562777 + 14562757 14562797 41 CGCCCAGCCCGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG CGCCCAGCCCGGGGCCTTTACAGCCGAAGCGGAATCCTCAG < 41bp 1 0.596141919444951 1 0.623228192329407 experiment 0.807716161110098 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562777 chr19:14562791 nonsynonymous SNV 0.997 3 35 hm5C_associated_SNPs_32344 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14562789-14562836
64251 chr19 18856652 18856652 1 + G T SARC 18856662 + 18856642 18856682 41 CAATCCTCGGGCCTGGACACCAGCCGGACCACCCGGCACCA CAATCCTCGGTCCTGGACACCAGCCGGACCACCCGGCACCA < 41bp 1 0.328978816647358 1 0.233965009450912 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18856662 chr19:18856652 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_32347 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18856646-18856667
64251 chr19 18856652 18856652 1 + G T SARC 18856665 + 18856645 18856685 41 TCCTCGGGCCTGGACACCAGCCGGACCACCCGGCACCATGG TCCTCGGTCCTGGACACCAGCCGGACCACCCGGCACCATGG < 41bp 1 0.529487026196126 1 0.559209108352661 experiment 0.941025947607747 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18856665 chr19:18856652 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_32348 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18856646-18856667
64251 chr19 41811635 41811635 1 + G T SARC 41811651 + 41811631 41811671 41 CACAGCCCCACCGCCTCCACCTCCACCACCACCTGCCTACA CACATCCCCACCGCCTCCACCTCCACCACCACCTGCCTACA < 41bp 1 0.587535778952951 1 0.940007448196411 experiment 0.824928442094098 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41811651 chr19:41811635 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_32349 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:41811620-41811640
64251 chr19 42410874 42410874 1 + G T SARC 42410885 + 42410865 42410905 41 AGGAATTTTGCCGCCTGAGACCCCTCCTGTCTCAGCTTGGG AGGAATTTTTCCGCCTGAGACCCCTCCTGTCTCAGCTTGGG < 41bp 1 0.137423559081667 1 0.0573893189430237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42410885 chr19:42410874 nonsynonymous SNV 0.989 1 10 hm5C_associated_SNPs_32350 0 0 13 BUD13 POSTAR2 ENCODE chr19:42410871-42410903
64251 chr19 50339145 50339145 1 + G T SARC 50339146 + 50339126 50339166 41 CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC CTCCTGGACCCATCCTTCGTCCCCAGAACCCTGGGGCCAAC < 41bp 1 0.52000662566082 1 0.187844932079315 experiment 0.95998674867836 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339146 chr19:50339145 synonymous SNV 0.997 0 20 hm5C_associated_SNPs_32351 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339145 50339145 1 + G T SARC 50339147 + 50339127 50339167 41 TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC TCCTGGACCCATCCTTCGTCCCCAGAACCCTGGGGCCAACC < 41bp 1 0.173790346462612 1 0.0891190767288208 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339147 chr19:50339145 synonymous SNV 0.997 0 19 hm5C_associated_SNPs_32352 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339145 50339145 1 + G T SARC 50339148 + 50339128 50339168 41 CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC CCTGGACCCATCCTTCGTCCCCAGAACCCTGGGGCCAACCC < 41bp 1 0.518407973163102 1 0.208131670951843 experiment 0.963184053673796 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339148 chr19:50339145 synonymous SNV 0.997 0 18 hm5C_associated_SNPs_32353 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339145 50339145 1 + G T SARC 50339149 + 50339129 50339169 41 CTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT CTGGACCCATCCTTCGTCCCCAGAACCCTGGGGCCAACCCT < 41bp 1 0.526562169053434 1 0.157688140869141 experiment 0.946875661893133 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339149 chr19:50339145 synonymous SNV 0.997 0 17 hm5C_associated_SNPs_32354 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339145 50339145 1 + G T SARC 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TCGTCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC < 41bp 1 0.0166160992732365 1 0.0558922290802002 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339145 synonymous SNV 0.997 0 4 hm5C_associated_SNPs_32355 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339145 50339145 1 + G T SARC 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT CGTCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT < 41bp 1 0.134552838684025 1 0.0556862950325012 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339145 synonymous SNV 0.997 0 3 hm5C_associated_SNPs_32356 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr20 60882496 60882496 1 + G T SARC 60882503 + 60882483 60882523 41 CCTCCAGGGAGCAGCTCCTCCTCCAGGTGAGCCTCATCGCT CCTCCAGGGAGCATCTCCTCCTCCAGGTGAGCCTCATCGCT < 41bp 1 0.732837081488288 1 0.963279843330383 experiment 0.534325837023425 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882503 chr20:60882496 nonsynonymous SNV 0.980 2 14 hm5C_associated_SNPs_32357 0 0 3 PRPF8 POSTAR2 ENCODE chr20:60882466-60882547
64251 chr21 47978246 47978246 1 + G T SARC 47978252 + 47978232 47978272 41 AAGGACCTGGGCCTGCCGGCCCGCGCCGTAAGCACCACGTT AAGGACCTGGGCCTTCCGGCCCGCGCCGTAAGCACCACGTT < 41bp 1 0.309992652060514 1 0.441160887479782 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47978252 chr21:47978246 synonymous SNV . 0 15 hm5C_associated_SNPs_32358 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:47978237-47978252
64251 chr22 30074249 30074249 1 + G T SARC 30074250 + 30074230 30074270 41 TTCAACCTCATTGGTGACAGCCTGTCTTTCGACTTCAAAGA TTCAACCTCATTGGTGACATCCTGTCTTTCGACTTCAAAGA < 41bp 1 0.134207930193517 1 0.14357516169548 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30074250 chr22:30074249 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_32359 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:30074238-30074258
64251 chrX 48760269 48760269 1 + G T SARC 48760278 + 48760258 48760298 41 ACACCACAGCAGCTGGGCCCCTCTTCCAGCAGCGGCCGTAT ACACCACAGCATCTGGGCCCCTCTTCCAGCAGCGGCCGTAT < 41bp 1 0.428694310999186 1 0.0763109624385834 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48760278 chrX:48760269 nonsynonymous SNV 0.999 3 12 hm5C_associated_SNPs_32360 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48760259-48760292
64251 chrX 73040692 73040692 1 - G T SARC 73040673 - 73040653 73040693 41 GCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGATGT GATAAGATAAATGGAAGACTCTTGAACTTGTGAACTGATGT < 41bp 1 0.290296710642904 1 0.552836537361145 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040673 chrX:73040692 . . 0 2 hm5C_associated_SNPs_32361 0 0 60 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040692 73040692 1 - G T SARC 73040675 - 73040655 73040695 41 AAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGAT AAGATAAGATAAATGGAAGACTCTTGAACTTGTGAACTGAT < 41bp 1 0.0639483489105394 1 0.0788148939609528 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040675 chrX:73040692 . . 0 4 hm5C_associated_SNPs_32362 0 0 60 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chr4 88967961 88967961 1 + G A SARC 88967960 + 88967940 88967980 41 TGGAAGAGATATTGGAAATTCGCATTCACAAACTACACTAT TGGAAGAGATATTGGAAATTCACATTCACAAACTACACTAT < 41bp 1 0.275525344248046 1 0.391426146030426 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKD2 ENSG00000118762 CDS Human protein_coding chr4:88967960 chr4:88967961 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_32363 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr4:88967961-88967984
64251 chr19 35225898 35225898 1 + G T SARC 35225902 + 35225882 35225922 41 CCCATCTCTAAGATAAGAGCCTGGAAAGAGGACTCTGTTGG CCCATCTCTAAGATAATAGCCTGGAAAGAGGACTCTGTTGG < 41bp 1 0.776623305926576 1 0.493177354335785 experiment 0.446753388146847 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF181 ENSG00000197841 UTR5 Human protein_coding chr19:35225902 chr19:35225898 . . 0 17 hm5C_associated_SNPs_32364 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:35225863-35225901
64251 chr11 17316992 17316992 1 + A G SARC 17316973 + 17316953 17316993 41 ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGGAA ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGGGA < 41bp 1 0.63282382595038 1 0.0877411067485809 experiment 0.73435234809924 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17316973 chr11:17316992 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_32366 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:17316970-17317000
64251 chr6 29910602 29910602 1 + G T SARC 29910604 + 29910584 29910624 41 GGGGAGCCCCGCTTCATCGCCGTGGGCTACGTGGACGACAC GGGGAGCCCCGCTTCATCTCCGTGGGCTACGTGGACGACAC < 41bp 1 0.66925963098168 1 0.779435276985168 experiment 0.66148073803664 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910604 chr6:29910602 nonsynonymous SNV 0.000 2 19 hm5C_associated_SNPs_32367 0 0 7 DDX3X POSTAR2 ENCODE chr6:29910567-29910603
64251 chr10 134980985 134980985 1 + G C SARC 134980995 + 134980975 134981015 41 TCCATGCGGAGCGTGGCCCACGCCGCCATCTTCCAGAGCCT TCCATGCGGACCGTGGCCCACGCCGCCATCTTCCAGAGCCT < 41bp 1 0.42166292769195 1 0.201328247785568 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KNDC1 ENSG00000171798 CDS Human protein_coding chr10:134980995 chr10:134980985 nonsynonymous SNV 0.060 4 11 hm5C_associated_SNPs_32368 0 0 1 DGCR8 POSTAR2 ENCODE chr10:134980948-134980998
64251 chr2 160605149 160605149 1 + G A SARC 160605129 + 160605109 160605149 41 ACAGAATGATCCTCTTGGAGCTGCTGCCAACAGACCACAAG ACAGAATGATCCTCTTGGAGCTGCTGCCAACAGACCACAAA < 41bp 1 0.615577126611678 1 0.121255576610565 experiment 0.768845746776645 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160605129 chr2:160605149 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_32369 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:160605110-160605162
64251 chr4 123145709 123145709 1 + C G SARC 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTCTGCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG < 41bp 1 0.4584980398072 1 0.32269212603569 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145709 synonymous SNV . 0 6 hm5C_associated_SNPs_32370 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chr4 154245295 154245295 1 + G T SARC 154245282 + 154245262 154245302 41 GAGATTATTATTACAGATTTCCATAATCATTCTGTCAAGGT GAGATTATTATTACAGATTTCCATAATCATTCTTTCAAGGT < 41bp 1 0.092104091574292 1 0.0787844657897949 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154245282 chr4:154245295 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_32372 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:154245267-154245295
64251 chr5 179153701 179153701 1 + G A SARC 179153689 + 179153669 179153709 41 CTTCTGTCTTAGAAGAGAAACAGAAAAGTGATGCTGAAGAA CTTCTGTCTTAGAAGAGAAACAGAAAAGTGATACTGAAGAA < 41bp 1 0.654264824157426 1 0.40679132938385 experiment 0.691470351685148 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179153689 chr5:179153701 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_32374 0 0 45 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:179153680-179153718
64251 chr5 179153701 179153701 1 + G A SARC 179153702 + 179153682 179153722 41 AGAGAAACAGAAAAGTGATGCTGAAGAAGATGGTGGCACTG AGAGAAACAGAAAAGTGATACTGAAGAAGATGGTGGCACTG < 41bp 1 0.743178032341062 1 0.384885460138321 experiment 0.513643935317876 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179153702 chr5:179153701 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_32375 0 0 45 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:179153680-179153718
64251 chr5 179153701 179153701 1 + G A SARC 179153718 + 179153698 179153738 41 GATGCTGAAGAAGATGGTGGCACTGTCAGTCAAGAGGAGGA GATACTGAAGAAGATGGTGGCACTGTCAGTCAAGAGGAGGA < 41bp 1 0.287710361013172 1 0.0860960185527802 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179153718 chr5:179153701 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_32376 0 0 45 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:179153680-179153718
64251 chr5 179153701 179153701 1 + G A SARC 179153720 + 179153700 179153740 41 TGCTGAAGAAGATGGTGGCACTGTCAGTCAAGAGGAGGAAG TACTGAAGAAGATGGTGGCACTGTCAGTCAAGAGGAGGAAG < 41bp 1 0.166292398721756 1 0.127440214157104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179153720 chr5:179153701 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_32377 0 0 45 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:179153680-179153718
64251 chr14 75190037 75190037 1 + G T SARC 75190025 + 75190005 75190045 41 CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTA CTGAAATTGAGAAATTGGGGCAGAAGTATCGATTGGCTCTA < 41bp 1 0.749681206231147 1 0.206355422735214 experiment 0.500637587537705 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCF1 ENSG00000119616 CDS Human protein_coding chr14:75190025 chr14:75190037 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_32378 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:75189981-75190044
64251 chr19 8551120 8551120 1 + G A SARC 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGACAT < 41bp 1 0.612506174883591 1 0.0977891683578491 experiment 0.774987650232817 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551120 nonsynonymous SNV 0.997 3 38 hm5C_associated_SNPs_32380 0 0 22 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551120 8551120 1 + G A SARC 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGACATT < 41bp 1 0.491859399507306 1 0.209218889474869 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551120 nonsynonymous SNV 0.997 3 37 hm5C_associated_SNPs_32381 0 0 22 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr19 8551120 8551120 1 + G A SARC 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGACATTG < 41bp 1 0.763973597955548 1 0.111594557762146 experiment 0.472052804088904 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551120 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_32382 0 0 22 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr6 110059609 110059609 1 + A G SARC 110059608 + 110059588 110059628 41 ATATAATTAAAAGTACTGTGCATCGTGACTGGCTTTTGTAT ATATAATTAAAAGTACTGTGCGTCGTGACTGGCTTTTGTAT < 41bp 1 0.111390076914917 1 0.0592632293701172 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FIG4 ENSG00000112367 CDS Human protein_coding chr6:110059608 chr6:110059609 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_32383 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:110059569-110059658
64251 chr6 31604863 31604863 1 + G T SARC 31604866 + 31604846 31604886 41 CAGGATTATCAAAAACTGAGCAGCAACCTTGGGGGACCTGG CAGGATTATCAAAAACTTAGCAGCAACCTTGGGGGACCTGG < 41bp 1 0.599757639694147 1 0.542932331562042 experiment 0.800484720611706 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604866 chr6:31604863 synonymous SNV . 0 18 hm5C_associated_SNPs_32384 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:31604823-31604897
64251 chr6 31604868 31604868 1 + G T SARC 31604866 + 31604846 31604886 41 CAGGATTATCAAAAACTGAGCAGCAACCTTGGGGGACCTGG CAGGATTATCAAAAACTGAGCATCAACCTTGGGGGACCTGG < 41bp 1 0.371962868558697 1 0.0708874762058258 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31604866 chr6:31604868 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_32385 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:31604823-31604897
64251 chrX 47101592 47101592 1 + G T SARC 47101578 + 47101558 47101598 41 CAAGTCCACGCTGGTGTGCCCCGATTGTGGCAATGTATCTG CAAGTCCACGCTGGTGTGCCCCGATTGTGGCAATTTATCTG < 41bp 1 0.151748215330614 1 0.0644755661487579 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47101578 chrX:47101592 nonsynonymous SNV 0.958 1 35 hm5C_associated_SNPs_32386 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47101580-47101600
64251 chr1 180012301 180012301 1 + G T SARC 180012302 + 180012282 180012322 41 TTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAACA TTCCAGACTTTGTGAAACATCTGAGGACCAGAACTGAAACA < 41bp 1 0.540150417851991 1 0.316316545009613 experiment 0.919699164296017 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180012302 chr1:180012301 nonsynonymous SNV 0.638 0 20 hm5C_associated_SNPs_32387 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:180012285-180012317
64251 chr1 43124106 43124106 1 + C T SARC 43124111 + 43124091 43124131 41 CCCGACTTCTGCTTCCGGGTCGGAGCCATGGCGGTGGCAAA CCCGACTTCTGCTTCTGGGTCGGAGCCATGGCGGTGGCAAA < 41bp 1 0.611867444074903 1 0.734655797481537 experiment 0.776265111850194 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PPIH ENSG00000171960 UTR5 Human protein_coding chr1:43124111 chr1:43124106 . . 0 16 hm5C_associated_SNPs_32388 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:43124100-43124120
64251 chr1 183519982 183519982 1 + C T SARC 183519963 + 183519943 183519983 41 GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTTC < 41bp 1 0.396161009381669 1 0.121208101511002 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519963 chr1:183519982 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_32389 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr1 183519983 183519983 1 + C T SARC 183519963 + 183519943 183519983 41 GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCT < 41bp 1 0.330988515296942 1 0.112538367509842 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519963 chr1:183519983 synonymous SNV . 0 41 hm5C_associated_SNPs_32390 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr2 234358759 234358759 1 + G A SARC 234358771 + 234358751 234358791 41 TCCCCAAGGGGAGGAGCCAGCGCAAAGGTACTTGTGCCTCC TCCCCAAGAGGAGGAGCCAGCGCAAAGGTACTTGTGCCTCC < 41bp 1 0.793387726589212 1 0.913113117218018 experiment 0.413224546821577 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKD ENSG00000077044 CDS Human protein_coding chr2:234358771 chr2:234358759 nonsynonymous SNV 0.794 0 9 hm5C_associated_SNPs_32391 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:234358734-234358772
64251 chr5 176863465 176863465 1 + C T SARC 176863468 + 176863448 176863488 41 GAGGTGAAGGAGCACCCCCTCTTTAAGAAGCTGAACTTCAA GAGGTGAAGGAGCACCCTCTCTTTAAGAAGCTGAACTTCAA < 41bp 1 0.430238297784646 1 0.199055045843124 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863468 chr5:176863465 synonymous SNV . 0 18 hm5C_associated_SNPs_32392 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:176863447-176863473
64251 chr9 139975207 139975207 1 + C T SARC 139975202 + 139975182 139975222 41 CCCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCC CCCCACTGAAGAACGCAGAGCCAGCTGACAGGGACAGTCCC < 41bp 1 0.103963554291515 1 0.493384420871735 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975202 chr9:139975207 synonymous SNV . 0 26 hm5C_associated_SNPs_32393 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr9 139975207 139975207 1 + C T SARC 139975203 + 139975183 139975223 41 CCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCCC CCCACTGAAGAACGCAGAGCCAGCTGACAGGGACAGTCCCC < 41bp 1 0.473951677597017 1 0.476031720638275 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975203 chr9:139975207 synonymous SNV . 0 25 hm5C_associated_SNPs_32394 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr14 71444585 71444585 1 + G A SARC 71444573 + 71444553 71444593 41 CTTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAAC CTTCCCAAGGGGACAGACCACCTGGGAACACTACAGAAAAC < 41bp 1 0.213605265116787 1 0.669636189937592 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444573 chr14:71444585 nonsynonymous SNV 0.003 0 33 hm5C_associated_SNPs_32396 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr14:71444568-71444587
64251 chr14 71444585 71444585 1 + G A SARC 71444574 + 71444554 71444594 41 TTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAACA TTCCCAAGGGGACAGACCACCTGGGAACACTACAGAAAACA < 41bp 1 0.52209951816202 1 0.752257287502289 experiment 0.95580096367596 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444574 chr14:71444585 nonsynonymous SNV 0.003 0 32 hm5C_associated_SNPs_32397 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr14:71444568-71444587
64251 chr19 50031746 50031746 1 + C T SARC 50031728 + 50031708 50031748 41 CTTTGCCACTCCCCAGGGACCGATGATGTGGCGACCATCAG CTTTGCCACTCCCCAGGGACCGATGATGTGGCGACCATTAG < 41bp 1 0.540726425258485 1 0.41703662276268 experiment 0.918547149483031 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RCN3 ENSG00000142552 CDS Human protein_coding chr19:50031728 chr19:50031746 nonsynonymous SNV 0.018 0 39 hm5C_associated_SNPs_32399 0 0 1 U2AF1 POSTAR2 ENCODE chr19:50031683-50031759
64251 chr6 44221273 44221273 1 + C G SARC 44221288 + 44221268 44221308 41 CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT CAGTTGCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT < 41bp 1 0.0518695458705699 1 0.0410882830619812 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221288 chr6:44221273 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_32400 0 0 47 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44221273 44221273 1 + C G SARC 44221289 + 44221269 44221309 41 AGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG AGTTGCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG < 41bp 1 0.304219762861038 1 0.188214391469955 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221289 chr6:44221273 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_32401 0 0 47 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr5 71495175 71495175 1 + G A SARC 71495192 + 71495172 71495212 41 GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAACC GTGACCACACACTTGGGGACCCCAGCTACTCTTATGAAACC < 41bp 1 0.0857362817603646 1 0.150597155094147 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495192 chr5:71495175 nonsynonymous SNV 0.989 1 4 hm5C_associated_SNPs_32403 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71495175-71495195
64251 chr19 48248837 48248837 1 + C T SARC 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGTGTTG < 41bp 1 0.720071492108121 1 0.532223761081696 experiment 0.559857015783759 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248837 synonymous SNV . 0 37 hm5C_associated_SNPs_32404 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr14 102800911 102800911 1 + G C SARC 102800918 + 102800898 102800938 41 AGCAGTGTGACCGGGAGGATCTGGTGGAATTGGCTCTGCCT AGCAGTGTGACCGCGAGGATCTGGTGGAATTGGCTCTGCCT < 41bp 1 0.752380298792373 1 0.812606811523438 experiment 0.495239402415255 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102800918 chr14:102800911 synonymous SNV . 0 14 hm5C_associated_SNPs_32405 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr14:102800891-102800921
64251 chr11 130003584 130003584 1 + A C SARC 130003575 + 130003555 130003595 41 GGAGGAACCAAAGCCTCTCTCTGCTCTACAAAGTACCTTAT GGAGGAACCAAAGCCTCTCTCTGCTCTACCAAGTACCTTAT < 41bp 1 0.50947729353768 1 0.513987064361572 experiment 0.98104541292464 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130003575 chr11:130003584 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_32406 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:130003560-130003587
64251 chr17 26685947 26685947 1 + C G SARC 26685943 + 26685923 26685963 41 AACCTTTTCTTCTCAGATTCCAAACTATACCTCCATGAGCT AACCTTTTCTTCTCAGATTCCAAAGTATACCTCCATGAGCT < 41bp 1 0.325910107829207 1 0.451225787401199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM199 ENSG00000244045 CDS Human protein_coding chr17:26685943 chr17:26685947 nonsynonymous SNV 0.973 0 25 hm5C_associated_SNPs_32407 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr17:26685938-26685959
64251 chr5 118861660 118861660 1 + C T SARC 118861674 + 118861654 118861694 41 TTTCTGCCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT TTTCTGTCAGGCGTGTGTTACAGCAGTTTGCAGATAATGAT < 41bp 1 0.75196631744724 1 0.114778578281403 experiment 0.49606736510552 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118861674 chr5:118861660 nonsynonymous SNV 0.999 2 7 hm5C_associated_SNPs_32408 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:118861639-118861687
64251 chr9 131847005 131847005 1 + C T SARC 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATTTGTCATCGTTGGTTTCGTGACCCT < 41bp 1 0.591501310148412 1 0.330249965190887 experiment 0.816997379703176 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131847005 synonymous SNV . 0 27 hm5C_associated_SNPs_32409 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:131846968-131847009
64251 chr9 129974455 129974455 1 + G T SARC 129974474 + 129974454 129974494 41 TGCCCACCATGGAGGGGCCTCTGAGAAGAAAAACCCTGCTC TTCCCACCATGGAGGGGCCTCTGAGAAGAAAAACCCTGCTC < 41bp 1 0.596368275990078 1 0.365530908107758 experiment 0.807263448019844 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129974474 chr9:129974455 synonymous SNV . 0 2 hm5C_associated_SNPs_32410 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:129974441-129974461
64251 chr3 4856236 4856236 1 + C A SARC 4856235 + 4856215 4856255 41 TAGGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA TAGGAGATGTACTCAGGAAGCAGTCCAAAGAGGTAAATTAA < 41bp 1 0.0965884590403437 1 0.628832995891571 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4856235 chr3:4856236 nonsynonymous SNV 0.974 5 22 hm5C_associated_SNPs_32412 0 0 2 DDX24 POSTAR2 ENCODE chr3:4856217-4856241
64251 chr1 113238120 113238120 1 + G A SARC 113238138 + 113238118 113238158 41 CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC CCAGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC < 41bp 1 0.0510049744243883 1 0.0426943004131317 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238138 chr1:113238120 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_32413 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr11 124502104 124502104 1 + A G SARC 124502089 + 124502069 124502109 41 GTAGATACTCACCTGCAGCACTTGAAGTCTCCATCACAGGG GTAGATACTCACCTGCAGCACTTGAAGTCTCCATCGCAGGG < 41bp 1 0.625019573823489 1 0.0816570818424225 experiment 0.749960852353023 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502089 chr11:124502104 synonymous SNV . 0 36 hm5C_associated_SNPs_32422 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:124502047-124502106
64251 chr15 93528743 93528743 1 + A G SARC 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGACGGTGACTCTGACACTGAGTC < 41bp 1 0.277457513590073 1 0.0738440454006195 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528743 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_32423 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:93528734-93528759
64251 chr15 93528762 93528762 1 + C A SARC 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTA < 41bp 1 0.229578521346873 1 0.0491126477718353 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528762 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_32424 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:93528735-93528764
64251 chr19 12734576 12734576 1 + T G SARC 12734581 + 12734561 12734601 41 GTGGGCTCTGCTGGCTCCTTCACAGAAGAAACTCTACAGAG GTGGGCTCTGCTGGCGCCTTCACAGAAGAAACTCTACAGAG < 41bp 1 0.642554616789624 1 0.52692836523056 experiment 0.714890766420751 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12734581 chr19:12734576 synonymous SNV . 0 16 hm5C_associated_SNPs_32425 0 0 6 BUD13 POSTAR2 ENCODE chr19:12734508-12734598
64251 chr14 103932063 103932063 1 + G T SARC 103932076 + 103932056 103932096 41 GATGTGTGGAGTCTGGGGGTCATTTTATACACACTAGTCAG GATGTGTTGAGTCTGGGGGTCATTTTATACACACTAGTCAG < 41bp 1 0.111360761414709 1 0.0669708847999573 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK3 ENSG00000075413 CDS Human protein_coding chr14:103932076 chr14:103932063 nonsynonymous SNV 0.973 4 8 hm5C_associated_SNPs_32428 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:103932022-103932076
64251 chr15 43632472 43632472 1 + G T SARC 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC ATATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC < 41bp 1 0.466365885033371 1 0.431919097900391 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632472 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_32429 0 0 2 DDX24 POSTAR2 ENCODE chr15:43632468-43632527
64251 chrX 70787352 70787352 1 + T A SARC 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATACTGAAGCGTGTTCCCAATAGTGTACTC < 41bp 1 0.214327900381433 1 0.114023178815842 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787352 synonymous SNV . 0 14 hm5C_associated_SNPs_32430 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr8 26227825 26227825 1 + G C SARC 26227822 + 26227802 26227842 41 ATGAAATAAGTGTTGACAGCCTAGACTTCAATAAGAAAATC ATGAAATAAGTGTTGACAGCCTACACTTCAATAAGAAAATC < 41bp 1 0.510601372153999 1 0.350491940975189 experiment 0.978797255692001 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227822 chr8:26227825 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_32431 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26227645-26227833
64251 chrX 153663637 153663637 1 + G C SARC 153663636 + 153663616 153663656 41 CCAGGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC CCAGGTTCATTCTGGCCAACCCCCTCTACCCAGTGTCTGCC < 41bp 1 0.135128420901427 1 0.0377902388572693 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663636 chrX:153663637 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_32432 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153663625-153663646
64251 chr1 118499757 118499757 1 + C T SARC 118499775 + 118499755 118499795 41 AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG AATGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG < 41bp 1 0.17532893698251 1 0.0771330893039703 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118499775 chr1:118499757 synonymous SNV . 0 3 hm5C_associated_SNPs_32433 0 0 14 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:118499701-118499758
64251 chr10 105172954 105172954 1 + C T SARC 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACAGCCTGGATGCCCACTCACCCGACTCTCTTGCC < 41bp 1 0.136529581837666 1 0.0752956569194794 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172954 nonsynonymous SNV 0.631 1 17 hm5C_associated_SNPs_32434 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr2 224824683 224824683 1 + G T SARC 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGGAGCCCTGTTACATAGCAGTGGACCTGAGAGGACTGC < 41bp 1 0.614446125742664 1 0.363405346870422 experiment 0.771107748514671 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824683 nonsynonymous SNV 0.998 0 18 hm5C_associated_SNPs_32437 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:224824650-224824688
64251 chr4 160264507 160264507 1 + G T SARC 160264487 + 160264467 160264507 41 TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTG TGAGAAGCTAAGGATGATTGCAAAAGAAATTCGTCACGTTT < 41bp 1 0.58980453074421 1 0.617821455001831 experiment 0.82039093851158 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160264487 chr4:160264507 nonsynonymous SNV 0.994 1 41 hm5C_associated_SNPs_32438 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:160264475-160264513
64251 chr2 220473312 220473312 1 + C G SARC 220473305 + 220473285 220473325 41 TTCTCTTGGTCTCTCCACAGCGGAACTCTGTCGCCCCTTGT TTCTCTTGGTCTCTCCACAGCGGAACTGTGTCGCCCCTTGT < 41bp 1 0.577293851203943 1 0.479629755020142 experiment 0.845412297592113 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STK11IP ENSG00000144589 CDS Human protein_coding chr2:220473305 chr2:220473312 synonymous SNV . 0 28 hm5C_associated_SNPs_32439 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:220473295-220473325
64251 chr11 57575922 57575922 1 + C T SARC 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACTTC < 41bp 1 0.0755986218855203 1 0.0472707152366638 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575922 nonsynonymous SNV 0.994 5 39 hm5C_associated_SNPs_32440 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:57575909-57575930
64251 chr7 794308 794308 1 + C T SARC 794297 + 794277 794317 41 AGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTG AGATCCTCCCTGCCCTGTGCCACGACATCACTGACTGGGTG < 41bp 1 0.746711589752234 1 0.225518673658371 experiment 0.506576820495532 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:794297 chr7:794308 synonymous SNV . 0 32 hm5C_associated_SNPs_32448 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:794300-794320
64251 chr2 10560064 10560064 1 + G C SARC 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTCTTCCCCTACGGCGACCCTTCCAA < 41bp 1 0.104233349982265 1 0.225900620222092 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560064 nonsynonymous SNV 0.990 1 34 hm5C_associated_SNPs_32451 0 0 1 METAP2 POSTAR2 ENCODE chr2:10560056-10560107
64251 chr14 73550231 73550231 1 + A T SARC 73550235 + 73550215 73550255 41 TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGAAAGCTT TTTTGAGCTGGAAGAGTGTACAAGGTGCTTCCGGAAAGCTT < 41bp 1 0.587062360122631 1 0.471704095602036 experiment 0.825875279754737 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73550235 chr14:73550231 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_32453 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:73550196-73550234
64251 chr7 106797466 106797466 1 + G T SARC 106797463 + 106797443 106797483 41 TTCTTTTTTCATTGTAGAATCTGGAGAAGTGAAAATTACTA TTCTTTTTTCATTGTAGAATCTGTAGAAGTGAAAATTACTA < 41bp 1 0.442372443848859 1 0.401453495025635 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106797463 chr7:106797466 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_32454 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:106797441-106797471
64251 chr13 111164409 111164409 1 + C T SARC 111164391 + 111164371 111164411 41 TGCAATGGAGGCCGCGGCACCTGCCACTACTACGCCAACAA TGCAATGGAGGCCGCGGCACCTGCCACTACTACGCCAATAA < 41bp 1 0.185600552576129 1 0.317409962415695 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111164391 chr13:111164409 synonymous SNV . 0 39 hm5C_associated_SNPs_32455 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:111164390-111164428
64251 chr9 131107639 131107639 1 + C T SARC 131107631 + 131107611 131107651 41 TGTAGCCAACTTCCTGCAGGCCCGGGGCCTGGCCTCGGGCG TGTAGCCAACTTCCTGCAGGCCCGGGGCTTGGCCTCGGGCG < 41bp 1 0.497073822468588 1 0.317719519138336 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107631 chr9:131107639 synonymous SNV . 0 29 hm5C_associated_SNPs_32456 0 0 1 DDX3X POSTAR2 ENCODE chr9:131107613-131107666
64251 chr22 38352837 38352837 1 + G T SARC 38352823 + 38352803 38352843 41 ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGAGAATGCC ATGTGGAGGAGGATGAAGGGCTAGATGACTTGGATAATGCC < 41bp 1 0.757209189223632 1 0.730084240436554 experiment 0.485581621552737 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352823 chr22:38352837 nonsynonymous SNV 0.984 1 35 hm5C_associated_SNPs_32457 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr22 38352837 38352837 1 + G T SARC 38352831 + 38352811 38352851 41 GAGGATGAAGGGCTAGATGACTTGGAGAATGCCGAAGAGGT GAGGATGAAGGGCTAGATGACTTGGATAATGCCGAAGAGGT < 41bp 1 0.559425010237742 1 0.223052978515625 experiment 0.881149979524516 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352831 chr22:38352837 nonsynonymous SNV 0.984 1 27 hm5C_associated_SNPs_32458 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr22 38352837 38352837 1 + G T SARC 38352843 + 38352823 38352863 41 CTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGCC CTAGATGACTTGGATAATGCCGAAGAGGTCAGTATTCAGCC < 41bp 1 0.633979761933704 1 0.528724193572998 experiment 0.732040476132592 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352843 chr22:38352837 nonsynonymous SNV 0.984 1 15 hm5C_associated_SNPs_32459 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:38352779-38352841
64251 chr5 14359550 14359550 1 + G T SARC 14359530 + 14359510 14359550 41 TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCT < 41bp 1 0.309215325034477 1 0.531204164028168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359530 chr5:14359550 synonymous SNV . 0 41 hm5C_associated_SNPs_32460 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359550 14359550 1 + G T SARC 14359551 + 14359531 14359571 41 TGCAGCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTC TGCAGCAGCTGGACGAGGCTCAGTCGCAGATGGAGGAGCTC < 41bp 1 0.0834602996074458 1 0.246335715055466 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359551 chr5:14359550 synonymous SNV . 0 20 hm5C_associated_SNPs_32461 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359550 14359550 1 + G T SARC 14359555 + 14359535 14359575 41 GCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTTCC GCAGCTGGACGAGGCTCAGTCGCAGATGGAGGAGCTCTTCC < 41bp 1 0.593170604039369 1 0.858298540115356 experiment 0.813658791921262 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359555 chr5:14359550 synonymous SNV . 0 16 hm5C_associated_SNPs_32462 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr9 100418026 100418026 1 + C T SARC 100418035 + 100418015 100418055 41 AACTTCCAGTTCCGTTGGAGCTGGGAAGATTGGTAAGTGAT AACTTCCAGTTTCGTTGGAGCTGGGAAGATTGGTAAGTGAT < 41bp 1 0.510313669134923 1 0.569613218307495 experiment 0.979372661730155 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100418035 chr9:100418026 synonymous SNV . 0 12 hm5C_associated_SNPs_32464 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:100418013-100418039
64251 chr1 183094669 183094669 1 + G A SARC 183094656 + 183094636 183094676 41 GCTTGTGACCCTGGATTCTACAATCTGCAGAGTGGGCAAGG GCTTGTGACCCTGGATTCTACAATCTGCAGAGTAGGCAAGG < 41bp 1 0.14426770577856 1 0.135522097349167 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183094656 chr1:183094669 nonsynonymous SNV 0.998 4 34 hm5C_associated_SNPs_32466 0 0 7 EIF3H POSTAR2 ENCODE chr1:183094630-183094683
64251 chr5 172315757 172315757 1 + G T SARC 172315759 + 172315739 172315779 41 CAGCCAACGTACACCGGGGCCATTAGTGAGTAGCCAACCTC CAGCCAACGTACACCGGGTCCATTAGTGAGTAGCCAACCTC < 41bp 1 0.190553822164734 1 0.0318441987037659 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172315759 chr5:172315757 nonsynonymous SNV 0.993 3 19 hm5C_associated_SNPs_32467 0 0 2 DDX3X POSTAR2 ENCODE chr5:172315701-172315759
64251 chr11 68204446 68204446 1 + G T SARC 68204450 + 68204430 68204470 41 CCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTG CCCCGACTGTATCGACTGCTCCGACGAGCTCATGTGTGGTG < 41bp 1 0.186735038718159 1 0.141347348690033 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204450 chr11:68204446 nonsynonymous SNV 0.247 4 17 hm5C_associated_SNPs_32470 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr11 68204446 68204446 1 + G T SARC 68204451 + 68204431 68204471 41 CCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGA CCCGACTGTATCGACTGCTCCGACGAGCTCATGTGTGGTGA < 41bp 1 0.39918423949541 1 0.63078761100769 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204451 chr11:68204446 nonsynonymous SNV 0.247 4 16 hm5C_associated_SNPs_32471 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr12 6943091 6943091 1 + G T SARC 6943099 + 6943079 6943119 41 TCCCTGGCAGATGTCCTTCTCCTGGAGGGTGTGACCTTGAC TCCCTGGCAGATTTCCTTCTCCTGGAGGGTGTGACCTTGAC < 41bp 1 0.227405251372092 1 0.835982620716095 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943099 chr12:6943091 nonsynonymous SNV 0.269 0 13 hm5C_associated_SNPs_32472 0 0 8 BUD13 POSTAR2 ENCODE chr12:6943080-6943118
64251 chr18 29116347 29116347 1 + A G SARC 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGTCATTGACGAACCACCTGGCATGGCAGAAAAA < 41bp 1 0.0822151763078011 1 0.136341273784637 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116347 nonsynonymous SNV 0.495 0 18 hm5C_associated_SNPs_32473 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:29116313-29116347
64251 chr18 29116347 29116347 1 + A G SARC 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGTCATTGACGAACCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.497213236333206 1 0.197096794843674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116347 nonsynonymous SNV 0.495 0 14 hm5C_associated_SNPs_32474 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:29116313-29116347
64251 chr18 29116347 29116347 1 + A G SARC 29116363 + 29116343 29116383 41 TGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCAC TGACGAACCACCTGGCATGGCAGAAAAATGGAAAATAGCAC < 41bp 1 0.592617478512666 1 0.321021944284439 experiment 0.814765042974669 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116363 chr18:29116347 nonsynonymous SNV 0.495 0 5 hm5C_associated_SNPs_32475 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:29116313-29116347
64251 chr12 104720164 104720164 1 + A T SARC 104720169 + 104720149 104720189 41 GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA GCTTGCACAAGAAAATTTGGCTTAGAAACCGTAGGGGTGAA < 41bp 1 0.202889341420675 1 0.0446728467941284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720169 chr12:104720164 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_32478 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:104720147-104720169
64251 chr4 48835496 48835496 1 + G C SARC 48835494 + 48835474 48835514 41 AATGATGAAAGCTTCTGGTTCAGATGTGAGTTCAATTTTCT AATGATGAAAGCTTCTGGTTCACATGTGAGTTCAATTTTCT < 41bp 1 0.286962781247844 1 0.087748646736145 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48835494 chr4:48835496 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_32479 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr4:48835455-48835496
64251 chr5 176524315 176524315 1 + T A SARC 176524296 + 176524276 176524316 41 CGCCCCACCTCTCGCAGGTACGGGCTGATGCGTGAGTGCTG CGCCCCACCTCTCGCAGGTACGGGCTGATGCGTGAGTGCAG < 41bp 1 0.541766472314992 1 0.582093358039856 experiment 0.916467055370017 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524296 chr5:176524315 nonsynonymous SNV 0.980 5 40 hm5C_associated_SNPs_32481 0 0 2 RPS3 POSTAR2 ENCODE chr5:176524292-176524352
64251 chr7 73604158 73604158 1 + G T SARC 73604152 + 73604132 73604172 41 TATTTTCCCTTTATCATTAGCTGTTGGGCGATCGGTCACTT TATTTTCCCTTTATCATTAGCTGTTGTGCGATCGGTCACTT < 41bp 1 0.241814518497093 1 0.0184942781925201 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4H ENSG00000106682 CDS Human protein_coding chr7:73604152 chr7:73604158 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_32482 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:73604143-73604181
64251 chr6 42996963 42996963 1 + G T SARC 42996946 + 42996926 42996966 41 CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGTAA CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGATTAA < 41bp 1 0.420193459858664 1 0.721584737300873 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996946 chr6:42996963 nonsynonymous SNV 0.905 1 38 hm5C_associated_SNPs_32483 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:42996940-42996980
64251 chr7 76112183 76112183 1 + C T SARC 76112193 + 76112173 76112213 41 GAACTGGCCCCGTGTCAGGCCGCTACCGCCACTCCATGACC GAACTGGCCCTGTGTCAGGCCGCTACCGCCACTCCATGACC < 41bp 1 0.44227660678897 1 0.245681464672089 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112193 chr7:76112183 synonymous SNV . 0 11 hm5C_associated_SNPs_32484 0 0 4 RBM15 POSTAR2 GSE78030,GSM2064710 chr7:76112182-76112183
64251 chr1 16057088 16057088 1 + C T SARC 16057075 + 16057055 16057095 41 GCCTTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGGGC GCCTTGTGCACTGGGAGGACCCCACAGACGAGTTCCTGGGC < 41bp 1 0.0955173383790526 1 0.189346730709076 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16057075 chr1:16057088 nonsynonymous SNV 0.966 0 34 hm5C_associated_SNPs_32485 0 0 1 GEMIN5 POSTAR2 ENCODE chr1:16057076-16057099
64251 chr1 16057089 16057089 1 + C T SARC 16057075 + 16057055 16057095 41 GCCTTGTGCACTGGGAGGACCCCACAGACGAGTCCCTGGGC GCCTTGTGCACTGGGAGGACCCCACAGACGAGTCTCTGGGC < 41bp 1 0.094841996478901 1 0.168963879346848 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16057075 chr1:16057089 synonymous SNV . 0 35 hm5C_associated_SNPs_32486 0 0 1 GEMIN5 POSTAR2 ENCODE chr1:16057076-16057099
64251 chr1 114483816 114483816 1 + T C SARC 114483796 + 114483776 114483816 41 CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGT CTTTCAGCATAAGAATCACACCTGCCTTGTTTTTGAAATGC < 41bp 1 0.0325707043328383 1 0.115395158529282 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483796 chr1:114483816 synonymous SNV . 0 41 hm5C_associated_SNPs_32487 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:114483785-114483832
64251 chr3 124351509 124351509 1 + C T SARC 124351528 + 124351508 124351548 41 GCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATG GTCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATG < 41bp 1 0.338698144260582 1 0.252815812826157 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KALRN ENSG00000160145 CDS Human protein_coding chr3:124351528 chr3:124351509 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_32488 0 0 3 BUD13 POSTAR2 ENCODE chr3:124351485-124351581
64251 chr3 124351510 124351510 1 + C T SARC 124351528 + 124351508 124351548 41 GCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATG GCTTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATG < 41bp 1 0.368469754795835 1 0.162541657686234 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KALRN ENSG00000160145 CDS Human protein_coding chr3:124351528 chr3:124351510 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_32489 0 0 3 BUD13 POSTAR2 ENCODE chr3:124351485-124351581
64251 chr4 517561 517561 1 + C T SARC 517553 + 517533 517573 41 GACAAAGGCCACGGAAGCCCCTCTACCTCCGAAGTGCTCAG GACAAAGGCCACGGAAGCCCCTCTACCTTCGAAGTGCTCAG < 41bp 1 0.642330721972817 1 0.880416750907898 experiment 0.715338556054367 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:517553 chr4:517561 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_32490 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:517536-517572
64251 chr4 186231899 186231899 1 + C T SARC 186231908 + 186231888 186231928 41 GAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAG GAATCCGAATCTTGGGAGGCCCTGCCTATGACCAGCAAGAG < 41bp 1 0.0674849819429303 1 0.415303081274033 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX25 ENSG00000109762 CDS Human protein_coding chr4:186231908 chr4:186231899 synonymous SNV . 0 12 hm5C_associated_SNPs_32491 0 0 2 UCHL5 POSTAR2 ENCODE chr4:186231809-186231948
64251 chr5 54654445 54654445 1 + G A SARC 54654434 + 54654414 54654454 41 AATACATTCAGATGTCTGGTCGTGCTGGAAGGAGAGGAATG AATACATTCAGATGTCTGGTCGTGCTGGAAGAAGAGGAATG < 41bp 1 0.205301999365429 1 0.15134185552597 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54654434 chr5:54654445 synonymous SNV . 0 32 hm5C_associated_SNPs_32492 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr5:54654419-54654471
64251 chr5 151183530 151183530 1 + C T SARC 151183550 + 151183530 151183570 41 CGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG TGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG < 41bp 1 0.346609898291754 1 0.483795493841171 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151183550 chr5:151183530 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_32493 0 0 17 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:151183520-151183540
64251 chr8 33355983 33355983 1 + G A SARC 33355999 + 33355979 33356019 41 TGAAGATCAGGATGGTAAATCCTCCAGTGAGGAGGAGGAAG TGAAAATCAGGATGGTAAATCCTCCAGTGAGGAGGAGGAAG < 41bp 1 0.117929669033383 1 0.0943751633167267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAK16 ENSG00000198042 CDS Human protein_coding chr8:33355999 chr8:33355983 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_32497 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:33355950-33355992
64251 chr9 135919222 135919222 1 + C T SARC 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCCGGCCCGAGAAGGAGGCCTTTTTCTACCAGGAGCTGCC < 41bp 1 0.0441574133000113 1 0.0312131643295288 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919222 nonsynonymous SNV 0.996 2 28 hm5C_associated_SNPs_32498 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:135919213-135919245
64251 chr11 65826321 65826321 1 + C T SARC 65826306 + 65826286 65826326 41 TCCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAACCGAAA TCCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAATCGAAA < 41bp 1 0.550502508386256 1 0.398898124694824 experiment 0.898994983227488 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826306 chr11:65826321 synonymous SNV . 0 36 hm5C_associated_SNPs_32499 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:65826320-65826340
64251 chr12 56361650 56361650 1 + G T SARC 56361667 + 56361647 56361687 41 TGAGGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGC TGATGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGC < 41bp 1 0.0429928844622199 1 0.193522095680237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK2 ENSG00000123374 CDS Human protein_coding chr12:56361667 chr12:56361650 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_32501 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56361650-56361669
64251 chr12 56361650 56361650 1 + G T SARC 56361668 + 56361648 56361688 41 GAGGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGCT GATGGTGTGCCCAGTACTGCCATCCGAGAGATCTCTCTGCT < 41bp 1 0.27325485745414 1 0.119551211595535 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK2 ENSG00000123374 CDS Human protein_coding chr12:56361668 chr12:56361650 nonsynonymous SNV 0.997 4 3 hm5C_associated_SNPs_32502 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56361650-56361669
64251 chr13 42773788 42773788 1 + G A SARC 42773796 + 42773776 42773816 41 TTAATAATAAAAGAGAGGAGCACCCTGAAAAATGCAGGTAA TTAATAATAAAAAAGAGGAGCACCCTGAAAAATGCAGGTAA < 41bp 1 0.0814025416883977 1 0.172528654336929 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKH ENSG00000102780 CDS Human protein_coding chr13:42773796 chr13:42773788 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_32503 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:42773772-42773795
64251 chr13 42773788 42773788 1 + G A SARC 42773800 + 42773780 42773820 41 TAATAAAAGAGAGGAGCACCCTGAAAAATGCAGGTAATTTT TAATAAAAAAGAGGAGCACCCTGAAAAATGCAGGTAATTTT < 41bp 1 0.389578277143485 1 0.745263814926147 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKH ENSG00000102780 CDS Human protein_coding chr13:42773800 chr13:42773788 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_32504 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:42773772-42773795
64251 chr14 73406981 73406981 1 + C T SARC 73406995 + 73406975 73407015 41 TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGA TTGCTCTCTGGACATAACAACTGCAACCCCCTGACGAAAGA < 41bp 1 0.684401743749867 1 0.335794001817703 experiment 0.631196512500267 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73406995 chr14:73406981 nonsynonymous SNV 0.993 1 7 hm5C_associated_SNPs_32505 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:73406966-73406987
64251 chr16 11133720 11133720 1 + C A SARC 11133722 + 11133702 11133742 41 CATCAGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACT CATCAGGATCATGAACAAAGCTGCCCAGCCAGGTGCCCACT < 41bp 1 0.315216561550839 1 0.0166054666042328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133722 chr16:11133720 nonsynonymous SNV 0.994 0 19 hm5C_associated_SNPs_32506 0 0 1 PPIG POSTAR2 ENCODE chr16:11133647-11133734
64251 chr16 11133720 11133720 1 + C A SARC 11133726 + 11133706 11133746 41 AGGATCATGAACAACGCTGCCCAGCCAGGTGCCCACTTGGG AGGATCATGAACAAAGCTGCCCAGCCAGGTGCCCACTTGGG < 41bp 1 0.0720379504914897 1 0.0511912405490875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133726 chr16:11133720 nonsynonymous SNV 0.994 0 15 hm5C_associated_SNPs_32507 0 0 1 PPIG POSTAR2 ENCODE chr16:11133647-11133734
64251 chr16 11133720 11133720 1 + C A SARC 11133730 + 11133710 11133750 41 TCATGAACAACGCTGCCCAGCCAGGTGCCCACTTGGGGTGT TCATGAACAAAGCTGCCCAGCCAGGTGCCCACTTGGGGTGT < 41bp 1 0.269874322523266 1 0.356685549020767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11133730 chr16:11133720 nonsynonymous SNV 0.994 0 11 hm5C_associated_SNPs_32508 0 0 1 PPIG POSTAR2 ENCODE chr16:11133647-11133734
64251 chr16 28844425 28844425 1 + C T SARC 28844423 + 28844403 28844443 41 GAACAGCCTGGATCCTTTTCCTCCCCGGATCTTAAAGGAGG GAACAGCCTGGATCCTTTTCCTTCCCGGATCTTAAAGGAGG < 41bp 1 0.0897582347849724 1 0.115086168050766 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844423 chr16:28844425 nonsynonymous SNV 0.990 0 23 hm5C_associated_SNPs_32510 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:28844389-28844432
64251 chr19 49376799 49376799 1 + C T SARC 49376803 + 49376783 49376823 41 TGAAAACCAGCAGTTCCCTTCCTGAAGCCTGGGGACTTTTG TGAAAACCAGCAGTTCTCTTCCTGAAGCCTGGGGACTTTTG < 41bp 1 0.218116796395228 1 0.0712926983833313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376803 chr19:49376799 synonymous SNV . 0 17 hm5C_associated_SNPs_32513 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:49376786-49376841
64251 chr19 49469165 49469165 1 + G A SARC 49469156 + 49469136 49469176 41 ACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGGTA ACCAGCGTGGCGGCCGCGCTCTCTTCCAGAACATCAAGGTA < 41bp 1 0.386825318342082 1 0.154728889465332 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469156 chr19:49469165 nonsynonymous SNV 0.740 2 30 hm5C_associated_SNPs_32514 0 0 1 PRPF8 POSTAR2 ENCODE chr19:49469157-49469224
64251 chr19 50912129 50912129 1 + C T SARC 50912125 + 50912105 50912145 41 CCACAACCTGTGTTACACCACGCTCCTTCGGCCCGGGACTG CCACAACCTGTGTTACACCACGCTTCTTCGGCCCGGGACTG < 41bp 1 0.241250348841866 1 0.0305946469306946 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912125 chr19:50912129 synonymous SNV . 0 25 hm5C_associated_SNPs_32515 2 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50912116-50912143
64251 chr19 55898033 55898033 1 + T G SARC 55898017 + 55897997 55898037 41 GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCG GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGGGTCG < 41bp 1 0.555459801037031 1 0.383931577205658 experiment 0.889080397925939 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898017 chr19:55898033 synonymous SNV . 0 37 hm5C_associated_SNPs_32517 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chrX 49142965 49142965 1 + G A SARC 49142948 + 49142928 49142968 41 GGACAGCCCCAAGGAATCGCCTCCAGAAATCCTCTCCGGGG GGACAGCCCCAAGGAATCGCCTCCAGAAATCCTCTCCAGGG < 41bp 1 0.764520985980727 1 0.844196498394012 experiment 0.470958028038546 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49142948 chrX:49142965 nonsynonymous SNV 0.986 3 38 hm5C_associated_SNPs_32518 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:49142953-49142988
64251 chr19 7584581 7584581 1 + C T SARC 7584583 + 7584563 7584603 41 CAGCCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAG CAGCCCGCCCCGGCCCTTTTCCTGCCCGGATTGCGGGCGAG < 41bp 1 0.208595428207206 1 0.41133576631546 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584583 chr19:7584581 synonymous SNV . 0 19 hm5C_associated_SNPs_32519 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584559-7584603
64251 chr19 7584581 7584581 1 + C T SARC 7584584 + 7584564 7584604 41 AGCCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAGC AGCCCGCCCCGGCCCTTTTCCTGCCCGGATTGCGGGCGAGC < 41bp 1 0.476052486690882 1 0.0847403407096863 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584584 chr19:7584581 synonymous SNV . 0 18 hm5C_associated_SNPs_32520 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584559-7584603
64251 chr2 120124578 120124578 1 + G T SARC 120124570 + 120124550 120124590 41 GCCAGTGCAATCTGGGCGATCGCTTCCTGGTCCTCGCCTCC GCCAGTGCAATCTGGGCGATCGCTTCCTTGTCCTCGCCTCC < 41bp 1 0.228288181579873 1 0.488007009029388 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DBI ENSG00000155368 UTR5 Human protein_coding chr2:120124570 chr2:120124578 . . 0 29 hm5C_associated_SNPs_32521 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:120124540-120124580
64251 chr22 50857777 50857777 1 + G T SARC 50857784 + 50857764 50857804 41 TGTGTGTCCAGCAGGCAGGACTGTGTGGAGCAGCTTCTGAA TGTGTGTCCAGCATGCAGGACTGTGTGGAGCAGCTTCTGAA < 41bp 1 0.244600124004147 1 0.024797797203064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R2;PPP6R2 ENSG00000100239;ENSG00000100239 exonic;splicing Human other chr22:50857784 chr22:50857777 nonsynonymous SNV 0.999 2 14 hm5C_associated_SNPs_32522 0 0 6 FMR1 POSTAR2 ENCODE chr22:50857777-50857803
64251 chr22 50857777 50857777 1 + G T SARC 50857797 + 50857777 50857817 41 GGCAGGACTGTGTGGAGCAGCTTCTGAAGAACATGTTTGAT TGCAGGACTGTGTGGAGCAGCTTCTGAAGAACATGTTTGAT < 41bp 1 0.146034993719683 1 0.148570507764816 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP6R2;PPP6R2 ENSG00000100239;ENSG00000100239 exonic;splicing Human other chr22:50857797 chr22:50857777 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_32523 0 0 6 FMR1 POSTAR2 ENCODE chr22:50857777-50857803
64251 chr1 36315805 36315805 1 + C A SARC 36315787 + 36315767 36315807 41 AGTGGCAATGTACCAGCAGGCACTACAGTGGATAGTACCAT AGTGGCAATGTACCAGCAGGCACTACAGTGGATAGTACAAT < 41bp 1 0.300668407486228 1 0.162241101264954 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO4 ENSG00000134698 CDS Human protein_coding chr1:36315787 chr1:36315805 synonymous SNV . 0 39 hm5C_associated_SNPs_32524 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585670 chr1:36315778-36315820
64251 chr8 121468857 121468857 1 + G T SARC 121468848 + 121468828 121468868 41 ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGACTCA ATGTTGTATCTTTAGAAGATCTCAGAAATTTTATTGACTCA < 41bp 1 0.34023491602868 1 0.0929602682590485 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTBP ENSG00000172167 CDS Human protein_coding chr8:121468848 chr8:121468857 nonsynonymous SNV 0.994 0 30 hm5C_associated_SNPs_32525 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:121468842-121468859
64251 chr9 139975182 139975182 1 + C T SARC 139975202 + 139975182 139975222 41 CCCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCC TCCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCC < 41bp 1 0.0792216012507189 1 0.59931355714798 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975202 chr9:139975182 nonsynonymous SNV 0.950 4 1 hm5C_associated_SNPs_32526 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr20 30822451 30822451 1 + G T SARC 30822434 + 30822414 30822454 41 TCTTCTTTCTTCGGCATGGACAGGCCCCCTAAGCTGCGGGA TCTTCTTTCTTCGGCATGGACAGGCCCCCTAAGCTGCTGGA < 41bp 1 0.746451593458657 1 0.6805819272995 experiment 0.507096813082686 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822434 chr20:30822451 nonsynonymous SNV 0.983 1 38 hm5C_associated_SNPs_32527 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:30822413-30822472
64251 chrX 40450494 40450494 1 + T C SARC 40450488 + 40450468 40450508 41 GTGCTTTTCAATGTTTAGGACCTTTCTTGGCCAGGACTCGC GTGCTTTTCAATGTTTAGGACCTTTCCTGGCCAGGACTCGC < 41bp 1 0.0200589404626907 1 0.0158659815788269 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450488 chrX:40450494 synonymous SNV . 0 27 hm5C_associated_SNPs_32528 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:40450480-40450500
64251 chr3 170109027 170109027 1 + A G SARC 170109032 + 170109012 170109052 41 TTTAGAAAAAGACAAAGAGGCTGAATATGCAGGACAGGTAA TTTAGAAAAAGACAAGGAGGCTGAATATGCAGGACAGGTAA < 41bp 1 0.775161248805107 1 0.368760854005814 experiment 0.449677502389786 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170109032 chr3:170109027 synonymous SNV . 0 16 hm5C_associated_SNPs_32529 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:170108993-170109031
64251 chr3 49728609 49728609 1 + A G SARC 49728615 + 49728595 49728635 41 AAGGATGGCATCCAAGGGGGCCGGCATGTCTTTCTCCCGCA AAGGATGGCATCCAGGGGGGCCGGCATGTCTTTCTCCCGCA < 41bp 1 0.15461507781196 1 0.258670032024384 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49728615 chr3:49728609 nonsynonymous SNV 0.992 1 15 hm5C_associated_SNPs_32531 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:49728594-49728633
64251 chr3 49728609 49728609 1 + A G SARC 49728616 + 49728596 49728636 41 AGGATGGCATCCAAGGGGGCCGGCATGTCTTTCTCCCGCAA AGGATGGCATCCAGGGGGGCCGGCATGTCTTTCTCCCGCAA < 41bp 1 0.621668992732931 1 0.498040288686752 experiment 0.756662014534138 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49728616 chr3:49728609 nonsynonymous SNV 0.992 1 14 hm5C_associated_SNPs_32532 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:49728594-49728633
64251 chr1 86048585 86048585 1 + C T SARC 86048568 + 86048548 86048588 41 CACGCCCCAGCTGACCAGGACTGTGAAGATGCGGTTCCGCT CACGCCCCAGCTGACCAGGACTGTGAAGATGCGGTTCTGCT < 41bp 1 0.171690251245232 1 0.0331593453884125 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048568 chr1:86048585 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_32533 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048585 86048585 1 + C T SARC 86048579 + 86048559 86048599 41 TGACCAGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGG TGACCAGGACTGTGAAGATGCGGTTCTGCTGCGAAGATGGG < 41bp 1 0.294860266312011 1 0.110654711723328 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048579 chr1:86048585 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_32534 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048585 86048585 1 + C T SARC 86048584 + 86048564 86048604 41 AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAC AGGACTGTGAAGATGCGGTTCTGCTGCGAAGATGGGGAGAC < 41bp 1 0.633631152177436 1 0.155374199151993 experiment 0.732737695645128 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048584 chr1:86048585 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_32535 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr1 86048585 86048585 1 + C T SARC 86048587 + 86048567 86048607 41 ACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACATT ACTGTGAAGATGCGGTTCTGCTGCGAAGATGGGGAGACATT < 41bp 1 0.769117131771987 1 0.121957719326019 experiment 0.461765736456025 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048587 chr1:86048585 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_32536 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:86048547-86048585
64251 chr3 183898716 183898716 1 + G A SARC 183898730 + 183898710 183898750 41 ATCGTCGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG ATCGTCAGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG < 41bp 1 0.789486215523534 1 0.725479185581207 experiment 0.421027568952932 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898730 chr3:183898716 nonsynonymous SNV 0.996 3 7 hm5C_associated_SNPs_32537 0 0 27 TARDBP POSTAR2 DRA001158,DRS012386 chr3:183898670-183898760
64251 chr5 10258269 10258269 1 + G A SARC 10258272 + 10258252 10258292 41 AGATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAG AGATTGCTGTGAATGCCATCCTCACTGTAGCAGATATGGAG < 41bp 1 0.345633179874825 1 0.492688089609146 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10258272 chr5:10258269 nonsynonymous SNV 0.969 1 18 hm5C_associated_SNPs_32538 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10258227-10258316
64251 chr5 10258269 10258269 1 + G A SARC 10258276 + 10258256 10258296 41 TGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGA TGCTGTGAATGCCATCCTCACTGTAGCAGATATGGAGCGGA < 41bp 1 0.721422631607886 1 0.426560252904892 experiment 0.557154736784228 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10258276 chr5:10258269 nonsynonymous SNV 0.969 1 14 hm5C_associated_SNPs_32539 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10258227-10258316
64251 chr5 10258269 10258269 1 + G A SARC 10258282 + 10258262 10258302 41 GAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGACG GAATGCCATCCTCACTGTAGCAGATATGGAGCGGAGAGACG < 41bp 1 0.356046795638737 1 0.331967651844025 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CCT5 ENSG00000150753 CDS Human protein_coding chr5:10258282 chr5:10258269 nonsynonymous SNV 0.969 1 8 hm5C_associated_SNPs_32540 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10258227-10258316
64251 chr12 94072703 94072703 1 + C A SARC 94072701 + 94072681 94072721 41 TCAATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTG TCAATGCTCAAACCACAGGCCTACGGAAAACAATGCTCCTG < 41bp 1 0.412072558068465 1 0.32093346118927 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072701 chr12:94072703 synonymous SNV . 0 23 hm5C_associated_SNPs_32543 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr16 81077298 81077298 1 + C T SARC 81077278 + 81077258 81077298 41 AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACAAGAAC AGTGAACTTTGGTAAAAGTCCATCTAATCCTTTACAAGAAT < 41bp 1 0.14011013463392 1 0.0987206101417542 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077278 chr16:81077298 synonymous SNV . 0 41 hm5C_associated_SNPs_32544 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:81077280-81077300
64251 chr1 183086567 183086567 1 + C T SARC 183086575 + 183086555 183086595 41 TCCTCGGTACTTCATTGCTCCTGGTAAGTAAGGCTAGAAAG TCCTCGGTACTTTATTGCTCCTGGTAAGTAAGGCTAGAAAG < 41bp 1 0.318510399932609 1 0.118433237075806 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086575 chr1:183086567 synonymous SNV . 0 13 hm5C_associated_SNPs_32547 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:183086536-183086574
64251 chr6 30692042 30692042 1 + G A SARC 30692022 + 30692002 30692042 41 TGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGCGAG TGTTCCGCCGGAAGGCCTTCCTCCACTGGTACACAGGCGAA < 41bp 1 0.637961610931896 1 0.98313844203949 experiment 0.724076778136208 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBB ENSG00000196230 CDS Human protein_coding chr6:30692022 chr6:30692042 synonymous SNV . 0 41 hm5C_associated_SNPs_32549 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30692020-30692080
64251 chr2 71651102 71651102 1 + A C SARC 71651115 + 71651095 71651135 41 GAGATATAACAAAACAATCTCAGGAAACAGAGGCTAGACCT GAGATATCACAAAACAATCTCAGGAAACAGAGGCTAGACCT < 41bp 1 0.745634393691059 1 0.912571609020233 experiment 0.508731212617882 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71651115 chr2:71651102 synonymous SNV . 0 8 hm5C_associated_SNPs_32551 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71651072-71651160
64251 chr12 56505265 56505265 1 + C A SARC 56505263 + 56505243 56505283 41 TTCTTCCTGTTTTCCAGGCCCTCCTCCAGAGTTCTGCAAGT TTCTTCCTGTTTTCCAGGCCCTACTCCAGAGTTCTGCAAGT < 41bp 1 0.129173382845662 1 0.0849402546882629 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56505263 chr12:56505265 synonymous SNV . 0 23 hm5C_associated_SNPs_32552 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:56505257-56505282
64251 chr14 58698793 58698793 1 + G T SARC 58698787 + 58698767 58698807 41 TTTCTTTTTAATAACAGTGTCCGATAGACACCAGGAAGCAA TTTCTTTTTAATAACAGTGTCCGATATACACCAGGAAGCAA < 41bp 1 0.157142155503915 1 0.106687933206558 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58698787 chr14:58698793 nonsynonymous SNV 0.996 5 27 hm5C_associated_SNPs_32553 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:58698789-58698816
64251 chr22 42280865 42280865 1 + C A SARC 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TCCTGCAGGATCAGCCTGTTCCGATGTACACATGGCGTTGT < 41bp 1 0.289534088737209 1 0.20135885477066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280865 synonymous SNV . 0 13 hm5C_associated_SNPs_32554 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr22:42280861-42280880
64251 chr11 10772978 10772978 1 + G C SARC 10772973 + 10772953 10772993 41 CCCCATCATGTCGCGGGGCTCCATCGAGATTCCCCTCCGGG CCCCATCATGTCGCGGGGCTCCATCCAGATTCCCCTCCGGG < 41bp 1 0.0826967242442558 1 0.101043879985809 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10772973 chr11:10772978 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_32555 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10772957-10772995
64251 chr8 26223880 26223880 1 + G A SARC 26223862 + 26223842 26223882 41 CCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCA CCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTACA < 41bp 1 0.290833097376098 1 0.300659894943237 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223862 chr8:26223880 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_32556 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223880 26223880 1 + G A SARC 26223864 + 26223844 26223884 41 TCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCATA TCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTACATA < 41bp 1 0.481524040823145 1 0.119374543428421 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223864 chr8:26223880 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_32557 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223880 26223880 1 + G A SARC 26223878 + 26223858 26223898 41 TGTTCACTGTATGAAAATGACTGCATATTTGACAAATTTGA TGTTCACTGTATGAAAATGACTACATATTTGACAAATTTGA < 41bp 1 0.388888702081493 1 0.0968121588230133 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223878 chr8:26223880 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_32558 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223880 26223880 1 + G A SARC 26223881 + 26223861 26223901 41 TCACTGTATGAAAATGACTGCATATTTGACAAATTTGAATG TCACTGTATGAAAATGACTACATATTTGACAAATTTGAATG < 41bp 1 0.082855303060721 1 0.0730753242969513 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223881 chr8:26223880 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_32559 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223880 26223880 1 + G A SARC 26223890 + 26223870 26223910 41 GAAAATGACTGCATATTTGACAAATTTGAATGTTGTTGGAA GAAAATGACTACATATTTGACAAATTTGAATGTTGTTGGAA < 41bp 1 0.205038543085504 1 0.175263941287994 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223890 chr8:26223880 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_32560 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr2 216197214 216197214 1 + A G SARC 216197204 + 216197184 216197224 41 TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCC TTTAGGTATTCCAGCCGCTGCCTCTTTCAAGCATGTCAGCC < 41bp 1 0.0438342924599657 1 0.135543435811996 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197204 chr2:216197214 synonymous SNV . 0 31 hm5C_associated_SNPs_32561 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:216197190-216197218
64251 chr2 216197214 216197214 1 + A G SARC 216197205 + 216197185 216197225 41 TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCCC TTAGGTATTCCAGCCGCTGCCTCTTTCAAGCATGTCAGCCC < 41bp 1 0.368200932959668 1 0.24529692530632 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197205 chr2:216197214 synonymous SNV . 0 30 hm5C_associated_SNPs_32562 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:216197190-216197218
64251 chr3 15253704 15253704 1 + G A SARC 15253701 + 15253681 15253721 41 CTGAGTATCTGGAAAGAGTTCAAGCTCTACATTCAGCAGGT CTGAGTATCTGGAAAGAGTTCAAACTCTACATTCAGCAGGT < 41bp 1 0.281308341019294 1 0.298398673534393 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15253701 chr3:15253704 nonsynonymous SNV 0.309 1 24 hm5C_associated_SNPs_32563 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:15253662-15253706
64251 chr9 4585514 4585514 1 + G T SARC 4585509 + 4585489 4585529 41 TTATGTCAATGGAGGCTTTGCAGTAGACAAGTCTGACACCA TTATGTCAATGGAGGCTTTGCAGTATACAAGTCTGACACCA < 41bp 1 0.682169896132298 1 0.679562091827393 experiment 0.635660207735403 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585509 chr9:4585514 nonsynonymous SNV 0.989 4 26 hm5C_associated_SNPs_32564 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:4585511-4585542
64251 chr19 45489826 45489826 1 + G T SARC 45489821 + 45489801 45489841 41 TGAAGGGCAGTGTGCCCCCTCCCCTGGATCAATGTAAGCTC TGAAGGGCAGTGTGCCCCCTCCCCTTGATCAATGTAAGCTC < 41bp 1 0.278332692054894 1 0.0901916027069092 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45489821 chr19:45489826 synonymous SNV . 0 26 hm5C_associated_SNPs_32565 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:45489789-45489827
64251 chr19 10370387 10370387 1 + A T SARC 10370393 + 10370373 10370413 41 CTCTGGCAGGACTCACGTTACAGACCCCTCTACCCCTTCAG CTCTGGCAGGACTCTCGTTACAGACCCCTCTACCCCTTCAG < 41bp 1 0.520649213767264 1 0.4022556245327 experiment 0.958701572465473 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10370393 chr19:10370387 synonymous SNV . 0 15 hm5C_associated_SNPs_32567 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:10370349-10370388
64251 chr2 236817475 236817475 1 + T A SARC 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCA < 41bp 1 0.118858150569543 1 0.0614896416664124 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817475 nonsynonymous SNV 0.317 3 41 hm5C_associated_SNPs_32570 0 0 3 DDX24 POSTAR2 ENCODE chr2:236817380-236817498
64251 chr16 3712046 3712046 1 - C T SARC 3712045 - 3712025 3712065 41 CCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCG CCTGCGCATGCAGCAGCTGACCAAGACCCAGGAGGAGCGCG < 41bp 1 0.312466713658543 1 0.13383287191391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712045 chr16:3712046 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_32572 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712046 3712046 1 - C T SARC 3712049 - 3712029 3712069 41 ACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAG ACTTCCTGCGCATGCAGCAGCTGACCAAGACCCAGGAGGAG < 41bp 1 0.288057358585044 1 0.566983222961426 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712049 chr16:3712046 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_32573 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr16 3712046 3712046 1 - C T SARC 3712061 - 3712041 3712081 41 GGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAG GGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGACCAAG < 41bp 1 0.52088434256696 1 0.132582157850266 experiment 0.958231314866081 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712061 chr16:3712046 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_32574 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3712046-3712081
64251 chr17 79418811 79418811 1 + C T SARC 79418808 + 79418788 79418828 41 CACTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCAGCG CACTGCCCCAGCGCAGCCGCCCATAGCCAACCCCTGCAGCG < 41bp 1 0.0782903352812453 1 0.0551517903804779 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BAHCC1 ENSG00000171282 CDS Human other chr17:79418808 chr17:79418811 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_32575 0 0 1 DDX6 POSTAR2 ENCODE chr17:79418774-79418834
64251 chr1 156705649 156705649 1 + A G SARC 156705645 + 156705625 156705665 41 CAGCCTGGCTCTACTGCTTGCCCCACTGGTGGAGACGCTTA CAGCCTGGCTCTACTGCTTGCCCCGCTGGTGGAGACGCTTA < 41bp 1 0.31678198165749 1 0.0695361793041229 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156705645 chr1:156705649 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_32576 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:156705635-156705662
64251 chr5 132400701 132400701 1 + G A SARC 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TCATTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC < 41bp 1 0.477196698306158 1 0.426067739725113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400701 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_32579 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132400683-132400729
64251 chr1 145761266 145761266 1 + T C SARC 145761280 + 145761260 145761300 41 CTTCTCTGGAAGTCTCAAGTCCACCAGATACTACAGAGGAA CTTCTCCGGAAGTCTCAAGTCCACCAGATACTACAGAGGAA < 41bp 1 0.0686379314747854 1 0.134644657373428 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDZK1 ENSG00000174827 CDS Human protein_coding chr1:145761280 chr1:145761266 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_32580 0 0 1 GRWD1 POSTAR2 ENCODE chr1:145761217-145761318
64251 chr19 5691405 5691405 1 + G C SARC 5691402 + 5691382 5691422 41 GCTTTGCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAG GCTTTGCCCCGTACGAGCGGCGCCCCATGGAGTTACTGAAG < 41bp 1 0.178643090608668 1 0.221743047237396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691402 chr19:5691405 nonsynonymous SNV 0.277 0 24 hm5C_associated_SNPs_32582 0 0 49 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:5691392-5691410
64251 chr19 5691405 5691405 1 + G C SARC 5691407 + 5691387 5691427 41 GCCCCGTACGAGCGGCGCGCCATGGAGTTACTGAAGGTCTC GCCCCGTACGAGCGGCGCCCCATGGAGTTACTGAAGGTCTC < 41bp 1 0.476386184013171 1 0.458378493785858 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691407 chr19:5691405 nonsynonymous SNV 0.277 0 19 hm5C_associated_SNPs_32583 0 0 49 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:5691392-5691410
64251 chrX 12837656 12837656 1 + G T SARC 12837674 + 12837654 12837694 41 GTGGAATTTGCTTTGATCCACAAAGAGAGGAAGAAGGCGAA GTTGAATTTGCTTTGATCCACAAAGAGAGGAAGAAGGCGAA < 41bp 1 0.533029995297261 1 0.509193956851959 experiment 0.933940009405478 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12837674 chrX:12837656 synonymous SNV . 0 3 hm5C_associated_SNPs_32584 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:12837635-12837661
64251 chr1 39926399 39926399 1 + G T SARC 39926397 + 39926377 39926417 41 CTCGAGTGATGGATTTCTTCCGGCGCATTGATAAGGACCAG CTCGAGTGATGGATTTCTTCCGTCGCATTGATAAGGACCAG < 41bp 1 0.108755352879679 1 0.690378069877625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39926397 chr1:39926399 synonymous SNV . 0 23 hm5C_associated_SNPs_32585 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39926379-39926432
64251 chr1 150280547 150280547 1 + G T SARC 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAGCCATGCCTCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.727158063942393 1 0.850033760070801 experiment 0.545683872115214 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280547 nonsynonymous SNV 0.691 0 19 hm5C_associated_SNPs_32587 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150280491-150280593
64251 chr1 153744921 153744921 1 + G T SARC 153744915 + 153744895 153744935 41 CTGACCAACACCAAGCAGAACTGTATGCCTTCCACCCTCGG CTGACCAACACCAAGCAGAACTGTATTCCTTCCACCCTCGG < 41bp 1 0.521532316101869 1 0.0480728149414062 experiment 0.956935367796262 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153744915 chr1:153744921 nonsynonymous SNV 0.626 0 27 hm5C_associated_SNPs_32588 0 0 1 PRPF8 POSTAR2 ENCODE chr1:153744914-153744972
64251 chr2 10925152 10925152 1 - G T SARC 10925150 - 10925130 10925170 41 CATTTTTCCCTAAGGGAGCTCTCTTTTGGGCGTGGCTCCAC CATTTTTCCCTAAGGGAGATCTCTTTTGGGCGTGGCTCCAC < 41bp 1 0.274277981703178 1 0.40240278840065 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDIA6 ENSG00000143870 CDS Human protein_coding chr2:10925150 chr2:10925152 nonsynonymous SNV 0.735 3 19 hm5C_associated_SNPs_32590 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:10925148-10925187
64251 chr2 60987381 60987381 1 + G T SARC 60987390 + 60987370 60987410 41 AATTAATTGACGCCATGAAACCATTTGGAGTGTTTGAAGAT AATTAATTGACTCCATGAAACCATTTGGAGTGTTTGAAGAT < 41bp 1 0.0620679993638661 1 0.0518468618392944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60987390 chr2:60987381 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_32591 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:60987377-60987429
64251 chr2 85770884 85770884 1 + C A SARC 85770875 + 85770855 85770895 41 ACAGCTTCCCATGGGAAGTGCCCAAAAAGCTTAAATATTGA ACAGCTTCCCATGGGAAGTGCCCAAAAAGATTAAATATTGA < 41bp 1 0.172501752857182 1 0.195756584405899 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAT2A ENSG00000168906 CDS Human protein_coding chr2:85770875 chr2:85770884 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_32592 0 0 25 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:85770880-85770900
64251 chr3 169953108 169953108 1 + G T SARC 169953106 + 169953086 169953126 41 TGTGTTCTTTTGACAACGAACAGCTCTTCACCATGAAATGG TGTGTTCTTTTGACAACGAACATCTCTTCACCATGAAATGG < 41bp 1 0.181563875728564 1 0.0524255633354187 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169953106 chr3:169953108 nonsynonymous SNV 0.756 1 23 hm5C_associated_SNPs_32594 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:169953080-169953119
64251 chr5 7885851 7885851 1 + G T SARC 7885832 + 7885812 7885852 41 AGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGC AGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCATC < 41bp 1 0.432658379811458 1 0.192095011472702 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885832 chr5:7885851 nonsynonymous SNV 0.894 1 40 hm5C_associated_SNPs_32595 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885851 7885851 1 + G T SARC 7885835 + 7885815 7885855 41 ATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGCGTG ATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCATCGTG < 41bp 1 0.219253747365502 1 0.200909823179245 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885835 chr5:7885851 nonsynonymous SNV 0.894 1 37 hm5C_associated_SNPs_32596 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885851 7885851 1 + G T SARC 7885852 + 7885832 7885872 41 CAGCCTGGAGATGCCTTCAGCGTGATCTGCCCTAACAGTGA CAGCCTGGAGATGCCTTCATCGTGATCTGCCCTAACAGTGA < 41bp 1 0.790210249805641 1 0.549559056758881 experiment 0.419579500388719 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885852 chr5:7885851 nonsynonymous SNV 0.894 1 20 hm5C_associated_SNPs_32597 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885851 7885851 1 + G T SARC 7885861 + 7885841 7885881 41 GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGT GATGCCTTCATCGTGATCTGCCCTAACAGTGATTCTGAGGT < 41bp 1 0.232597181017691 1 0.0593677163124084 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885861 chr5:7885851 nonsynonymous SNV 0.894 1 11 hm5C_associated_SNPs_32598 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885851 7885851 1 + G T SARC 7885862 + 7885842 7885882 41 ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTA ATGCCTTCATCGTGATCTGCCCTAACAGTGATTCTGAGGTA < 41bp 1 0.201536167684009 1 0.0889912843704224 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885862 chr5:7885851 nonsynonymous SNV 0.894 1 10 hm5C_associated_SNPs_32599 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885851 7885851 1 + G T SARC 7885863 + 7885843 7885883 41 TGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTAC TGCCTTCATCGTGATCTGCCCTAACAGTGATTCTGAGGTAC < 41bp 1 0.252153593674194 1 0.109326422214508 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885863 chr5:7885851 nonsynonymous SNV 0.894 1 9 hm5C_associated_SNPs_32600 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 134099710 134099710 1 + G T SARC 134099691 + 134099671 134099711 41 GTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGATAGA GTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGATATA < 41bp 1 0.381656507614509 1 0.514952600002289 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099691 chr5:134099710 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_32601 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr5 139906578 139906578 1 + G T SARC 139906560 + 139906540 139906580 41 CTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCT CTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAATCT < 41bp 1 0.179553744767993 1 0.115045964717865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139906560 chr5:139906578 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_32602 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:139906564-139906585
64251 chr5 169015487 169015487 1 + G T SARC 169015481 + 169015461 169015501 41 AAGAGGCTGAAGAAGAGCGACTAAAAGCTGCACAGTATGGT AAGAGGCTGAAGAAGAGCGACTAAAATCTGCACAGTATGGT < 41bp 1 0.457335886963328 1 0.187601447105408 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169015481 chr5:169015487 nonsynonymous SNV 0.712 1 27 hm5C_associated_SNPs_32603 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr5:169015460-169015505
64251 chr6 168314953 168314953 1 + G T SARC 168314938 + 168314918 168314958 41 AGCAAGACCGAGACCTTAGTCGGATCACACTGGATGCTCAA AGCAAGACCGAGACCTTAGTCGGATCACACTGGATTCTCAA < 41bp 1 0.33081206782099 1 0.879453897476196 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168314938 chr6:168314953 nonsynonymous SNV 0.978 3 36 hm5C_associated_SNPs_32605 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:168314915-168314956
64251 chr7 139094370 139094370 1 + G T SARC 139094351 + 139094331 139094371 41 AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGATA < 41bp 1 0.532453139785238 1 0.369998097419739 experiment 0.935093720429523 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094351 chr7:139094370 nonsynonymous SNV 0.981 4 40 hm5C_associated_SNPs_32606 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139094334-139094397
64251 chr7 139094370 139094370 1 + G T SARC 139094357 + 139094337 139094377 41 GAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGAGAGAGA GAAACCAGGAACGGCTGAAACGAAGAGAAGAGATAGAGAGA < 41bp 1 0.647061734533577 1 0.666119039058685 experiment 0.705876530932845 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094357 chr7:139094370 nonsynonymous SNV 0.981 4 34 hm5C_associated_SNPs_32607 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139094334-139094397
64251 chr8 21851913 21851913 1 + G T SARC 21851912 + 21851892 21851932 41 GTAAGAGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAA GTAAGAGACCTGAGAGGGATCTCTTTCGCTTTCAATGCCAA < 41bp 1 0.212974221587595 1 0.134415149688721 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21851912 chr8:21851913 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_32623 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:21851903-21851944
64251 chr8 26505239 26505239 1 + G T SARC 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCCGCATTTCTGTGGGATCCGATGCCGACCTGGTCATCT < 41bp 1 0.175808475509677 1 0.092258095741272 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505239 nonsynonymous SNV 0.746 3 11 hm5C_associated_SNPs_32624 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505227-26505251
64251 chr8 48885506 48885506 1 + G T SARC 48885502 + 48885482 48885522 41 ACCTGGTCGCACTGTACTACCAGAGCGAGGAGCAGGCAGAG ACCTGGTCGCACTGTACTACCAGATCGAGGAGCAGGCAGAG < 41bp 1 0.560570136029255 1 0.325370132923126 experiment 0.87885972794149 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48885502 chr8:48885506 nonsynonymous SNV 0.940 2 25 hm5C_associated_SNPs_32625 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48885468-48885565
64251 chr8 145138166 145138166 1 + G T SARC 145138162 + 145138142 145138182 41 TTTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTT TTTGCGGGCGGAGACCGTGCCCGGTCTTTTGCCCGGGACTT < 41bp 1 0.490223418788333 1 0.296031981706619 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145138162 chr8:145138166 nonsynonymous SNV 0.016 0 25 hm5C_associated_SNPs_32626 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145138141-145138194
64251 chr8 145138166 145138166 1 + G T SARC 145138163 + 145138143 145138183 41 TTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTTC TTGCGGGCGGAGACCGTGCCCGGTCTTTTGCCCGGGACTTC < 41bp 1 0.467188530690702 1 0.603871643543243 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145138163 chr8:145138166 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_32627 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145138141-145138194
64251 chr10 102716219 102716219 1 + G T SARC 102716213 + 102716193 102716233 41 ATTTGTTTTGCACAGAAACACTTTGTGCTACTCTGTGGGGC ATTTGTTTTGCACAGAAACACTTTGTTCTACTCTGTGGGGC < 41bp 1 0.142015420527989 1 0.107049852609634 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102716213 chr10:102716219 synonymous SNV . 0 27 hm5C_associated_SNPs_32629 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:102716219-102716243
64251 chr10 103285835 103285835 1 + G T SARC 103285833 + 103285813 103285853 41 GGATGCCAAATCACTATGTGCTGCTGAACTTGTGTGCAAGG GGATGCCAAATCACTATGTGCTTCTGAACTTGTGTGCAAGG < 41bp 1 0.08719487831122 1 0.0503793060779572 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTRC ENSG00000166167 CDS Human protein_coding chr10:103285833 chr10:103285835 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_32630 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr10:103285824-103285919
64251 chr11 6962806 6962806 1 + G T SARC 6962809 + 6962789 6962829 41 TCATCTTCCTCAGATATGCCCTGCAAGGACTCTGCCCTGCA TCATCTTCCTCAGATATTCCCTGCAAGGACTCTGCCCTGCA < 41bp 1 0.79299487459691 1 0.649266481399536 experiment 0.41401025080618 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF215 ENSG00000149054 CDS Human protein_coding chr11:6962809 chr11:6962806 nonsynonymous SNV 0.004 0 18 hm5C_associated_SNPs_32631 0 0 1 UCHL5 POSTAR2 ENCODE chr11:6962798-6962849
64251 chr11 61631185 61631185 1 + G T SARC 61631203 + 61631183 61631223 41 CAGCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG CATCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG < 41bp 1 0.0343439893107208 1 0.272130966186523 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61631203 chr11:61631185 nonsynonymous SNV 0.820 1 3 hm5C_associated_SNPs_32633 0 0 5 EIF3H POSTAR2 ENCODE chr11:61631178-61631202
64251 chr11 66627138 66627138 1 + G T SARC 66627122 + 66627102 66627142 41 CTGCAGGATTGTCCCAGCCTCCAGCCACCACTTCCTGCTGA CTGCAGGATTGTCCCAGCCTCCAGCCACCACTTCCTTCTGA < 41bp 1 0.187641876659028 1 0.378136456012726 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627122 chr11:66627138 synonymous SNV . 0 37 hm5C_associated_SNPs_32635 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:66627112-66627138
64251 chr11 66627138 66627138 1 + G T SARC 66627129 + 66627109 66627149 41 ATTGTCCCAGCCTCCAGCCACCACTTCCTGCTGAAGCACCT ATTGTCCCAGCCTCCAGCCACCACTTCCTTCTGAAGCACCT < 41bp 1 0.0625968849283024 1 0.0596520602703094 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627129 chr11:66627138 synonymous SNV . 0 30 hm5C_associated_SNPs_32636 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:66627112-66627138
64251 chr12 95888830 95888830 1 + G T SARC 95888833 + 95888813 95888853 41 CTCTCAATAATTGTGCTGCCCATTATACTCCCAATGCCGGT CTCTCAATAATTGTGCTTCCCATTATACTCCCAATGCCGGT < 41bp 1 0.399458325933214 1 0.104094535112381 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95888833 chr12:95888830 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_32639 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:95888742-95888913
64251 chr13 52604955 52604955 1 + G T SARC 52604967 + 52604947 52604987 41 TGAGAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAG TGAGAAGCTCAACATCCACGCAGCAGCTCATCAGGTACAAG < 41bp 1 0.544529376804401 1 0.157406568527222 experiment 0.910941246391198 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604967 chr13:52604955 nonsynonymous SNV 0.925 2 9 hm5C_associated_SNPs_32641 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:52604944-52604956
64251 chr13 52604955 52604955 1 + G T SARC 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGCTCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC < 41bp 1 0.150659147862536 1 0.0705333650112152 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604955 nonsynonymous SNV 0.925 2 6 hm5C_associated_SNPs_32642 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:52604944-52604956
64251 chr14 104638944 104638944 1 + G T SARC 104638925 + 104638905 104638945 41 CCCCTAGGCCGAAGTCTGCTCGGGGACCGTGGCCGACGTGC CCCCTAGGCCGAAGTCTGCTCGGGGACCGTGGCCGACGTTC < 41bp 1 0.750335690230318 1 0.935822486877441 experiment 0.499328619539363 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104638925 chr14:104638944 synonymous SNV . 0 40 hm5C_associated_SNPs_32644 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:104638940-104638960
64251 chr15 22955228 22955228 1 + G T SARC 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGATCGGCTTCGACATAAAAGTACCACGCCG < 41bp 1 0.749999654351137 1 0.596614897251129 experiment 0.500000691297726 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955228 nonsynonymous SNV . 0 14 hm5C_associated_SNPs_32645 0 0 8 BUD13 POSTAR2 ENCODE chr15:22955182-22955228
64251 chr15 89849342 89849342 1 + G T SARC 89849336 + 89849316 89849356 41 CATTTTTCCACGAGCTGGTGCAGACAGCTCTGCCATCAGGC CATTTTTCCACGAGCTGGTGCAGACATCTCTGCCATCAGGC < 41bp 1 0.131389344344446 1 0.357886910438538 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89849336 chr15:89849342 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_32646 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:89849321-89849359
64251 chr17 17698414 17698414 1 + G T SARC 17698433 + 17698413 17698453 41 TGCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCGG TTCTCCAGACCCCACTACAGCAGCTTTTGACTGTTTCCCGG < 41bp 1 0.373603632919662 1 0.20693176984787 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698433 chr17:17698414 nonsynonymous SNV 0.014 0 2 hm5C_associated_SNPs_32647 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:17698365-17698431
64251 chr17 35310458 35310458 1 + G T SARC 35310470 + 35310450 35310490 41 GGGATGACGCGGAAGACTCCCAAGGCGAGAGTGAGGAAGAC GGGATGACTCGGAAGACTCCCAAGGCGAGAGTGAGGAAGAC < 41bp 1 0.728689444839112 1 0.708315134048462 experiment 0.542621110321775 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AATF ENSG00000108270 CDS Human other chr17:35310470 chr17:35310458 nonsynonymous SNV 0.003 0 9 hm5C_associated_SNPs_32648 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35310385-35310540
64251 chr17 54912550 54912550 1 + G T SARC 54912549 + 54912529 54912569 41 CACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTG CACCACTGGATCCGGGGCAACTTGCCCCTGTGCAGTTACTG < 41bp 1 0.25560398093076 1 0.0718756318092346 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912549 chr17:54912550 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_32649 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:54912537-54912558
64251 chr17 73567052 73567052 1 + G T SARC 73567066 + 73567046 73567086 41 GCCAAGGCTGAGCGGCCAGGCCTCCAGAACATGGAGCTGGC GCCAAGTCTGAGCGGCCAGGCCTCCAGAACATGGAGCTGGC < 41bp 1 0.0702349503765326 1 0.396340906620026 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73567066 chr17:73567052 nonsynonymous SNV 0.011 0 7 hm5C_associated_SNPs_32650 0 0 4 EFTUD2 POSTAR2 ENCODE chr17:73567023-73567066
64251 chr17 78079630 78079630 1 + G T SARC 78079642 + 78079622 78079662 41 ACTCTACAGCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGA ACTCTACATCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGA < 41bp 1 0.771285731409565 1 0.913483023643494 experiment 0.45742853718087 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GAA ENSG00000171298 CDS Human protein_coding chr17:78079642 chr17:78079630 nonsynonymous SNV 0.951 1 9 hm5C_associated_SNPs_32651 0 0 2 PCBP2 POSTAR2 ENCODE chr17:78079546-78079642
64251 chr17 80426696 80426696 1 + G T SARC 80426677 + 80426657 80426697 41 GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTTC < 41bp 1 0.53209412944471 1 0.43389105796814 experiment 0.935811741110579 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NARF ENSG00000141562 CDS Human protein_coding chr17:80426677 chr17:80426696 nonsynonymous SNV 0.996 3 40 hm5C_associated_SNPs_32652 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80426641-80426696
64251 chr19 10941695 10941695 1 + G T SARC 10941683 + 10941663 10941703 41 CCCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCG CCCTGCTGCGCCCAGCCGGCCCACCATTATCCTCCCAGCCG < 41bp 1 0.0705428488409982 1 0.0330395102500916 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941683 chr19:10941695 nonsynonymous SNV 0.988 4 33 hm5C_associated_SNPs_32654 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941695 10941695 1 + G T SARC 10941684 + 10941664 10941704 41 CCTGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGA CCTGCTGCGCCCAGCCGGCCCACCATTATCCTCCCAGCCGA < 41bp 1 0.734912905873891 1 0.233752965927124 experiment 0.530174188252218 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941684 chr19:10941695 nonsynonymous SNV 0.988 4 32 hm5C_associated_SNPs_32655 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941695 10941695 1 + G T SARC 10941686 + 10941666 10941706 41 TGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGC TGCTGCGCCCAGCCGGCCCACCATTATCCTCCCAGCCGAGC < 41bp 1 0.0494985293325003 1 0.0902315080165863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941686 chr19:10941695 nonsynonymous SNV 0.988 4 30 hm5C_associated_SNPs_32656 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941695 10941695 1 + G T SARC 10941687 + 10941667 10941707 41 GCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCC GCTGCGCCCAGCCGGCCCACCATTATCCTCCCAGCCGAGCC < 41bp 1 0.233745378838239 1 0.0775275528430939 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941687 chr19:10941695 nonsynonymous SNV 0.988 4 29 hm5C_associated_SNPs_32657 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 11145703 11145703 1 + G T SARC 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCGGAGGTGGATCGGCTGAC < 41bp 1 0.716112105327079 1 0.669110476970673 experiment 0.567775789345841 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145703 nonsynonymous SNV 0.999 2 33 hm5C_associated_SNPs_32658 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145703 11145703 1 + G T SARC 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGGAGGTGGATCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.577796548487717 1 0.507588028907776 experiment 0.844406903024565 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145703 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_32659 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145703 11145703 1 + G T SARC 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGGAGGTGGATCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.292969541590901 1 0.31572437286377 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145703 nonsynonymous SNV 0.999 2 17 hm5C_associated_SNPs_32660 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 36212452 36212452 1 + G T SARC 36212461 + 36212441 36212481 41 CACAGACACAGGCTCAGCTACTGCAGCCCCTGCAGGCCTTG CACAGACACAGTCTCAGCTACTGCAGCCCCTGCAGGCCTTG < 41bp 1 0.375570494821546 1 0.364987730979919 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36212461 chr19:36212452 nonsynonymous SNV 0.900 1 12 hm5C_associated_SNPs_32661 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36212434-36212466
64251 chr19 46026012 46026012 1 + G T SARC 46026006 + 46025986 46026026 41 CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGA CCTCAGGGGGGCCCACAGCCCCCAAATCTGAGAGTGGTCGA < 41bp 1 0.634668625909604 1 0.286887258291245 experiment 0.730662748180791 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026006 chr19:46026012 nonsynonymous SNV 0.669 0 27 hm5C_associated_SNPs_32662 0 0 7 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr19 46026012 46026012 1 + G T SARC 46026007 + 46025987 46026027 41 CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAA CTCAGGGGGGCCCACAGCCCCCAAATCTGAGAGTGGTCGAA < 41bp 1 0.336942117089532 1 0.0930121839046478 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026007 chr19:46026012 nonsynonymous SNV 0.669 0 26 hm5C_associated_SNPs_32663 0 0 7 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr19 46026012 46026012 1 + G T SARC 46026008 + 46025988 46026028 41 TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAG TCAGGGGGGCCCACAGCCCCCAAATCTGAGAGTGGTCGAAG < 41bp 1 0.32352187518494 1 0.35785111784935 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026008 chr19:46026012 nonsynonymous SNV 0.669 0 25 hm5C_associated_SNPs_32664 0 0 7 EFTUD2 POSTAR2 ENCODE chr19:46025961-46026016
64251 chr19 49652930 49652930 1 + G T SARC 49652931 + 49652911 49652951 41 TCGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCTCC TCGTTCGGCTGCAGCGGGATCCCTGGGCTCTCCGGGGCTCC < 41bp 1 0.190820350182187 1 0.102026283740997 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652931 chr19:49652930 nonsynonymous SNV 0.997 0 20 hm5C_associated_SNPs_32665 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr19 49652930 49652930 1 + G T SARC 49652932 + 49652912 49652952 41 CGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCTCCC CGTTCGGCTGCAGCGGGATCCCTGGGCTCTCCGGGGCTCCC < 41bp 1 0.24431951993765 1 0.304368615150452 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652932 chr19:49652930 nonsynonymous SNV 0.997 0 19 hm5C_associated_SNPs_32666 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr19 49652930 49652930 1 + G T SARC 49652948 + 49652928 49652968 41 GAGCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAG GATCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAG < 41bp 1 0.0959392732199028 1 0.140617072582245 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652948 chr19:49652930 nonsynonymous SNV 0.997 0 3 hm5C_associated_SNPs_32667 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr19 49652930 49652930 1 + G T SARC 49652950 + 49652930 49652970 41 GCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAGCC TCCCTGGGCTCTCCGGGGCTCCCTCTCCGCAAGCTGCAGCC < 41bp 1 0.052243082278915 1 0.0465338528156281 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652950 chr19:49652930 nonsynonymous SNV 0.997 0 1 hm5C_associated_SNPs_32668 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr20 39978514 39978514 1 + G T SARC 39978516 + 39978496 39978536 41 GAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGT GAGTCCCACATGCAGTGGTCCTGGGGGAGGCTGCCTAAGGT < 41bp 1 0.684574918920317 1 0.693087577819824 experiment 0.630850162159366 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39978516 chr20:39978514 nonsynonymous SNV 1.000 0 19 hm5C_associated_SNPs_32670 0 0 3 DDX24 POSTAR2 ENCODE chr20:39978456-39978533
64251 chrX 103411577 103411577 1 + G T SARC 103411562 + 103411542 103411582 41 CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGG CCTCCTCGCGGGGTGGGCACCTGCCCGAGCGAGGATCCGGG < 41bp 1 0.780979777915049 1 0.294033050537109 experiment 0.438040444169902 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411562 chrX:103411577 nonsynonymous SNV 0.984 1 36 hm5C_associated_SNPs_32678 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:103411558-103411589
64251 chrX 106046128 106046128 1 + G T SARC 106046129 + 106046109 106046149 41 TTCTGAAAAATGCGCTGAAGCTGTGGCTGATGGAAAGGTCC TTCTGAAAAATGCGCTGAATCTGTGGCTGATGGAAAGGTCC < 41bp 1 0.631041200626138 1 0.312725216150284 experiment 0.737917598747723 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TBC1D8B ENSG00000133138 CDS Human protein_coding chrX:106046129 chrX:106046128 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_32679 0 0 1 PPIG POSTAR2 ENCODE chrX:106046007-106046136
64251 chrX 107842029 107842029 1 + G T SARC 107842027 + 107842007 107842047 41 CCTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGG CCTATGGGTCCCCCTGGTTTCGTCCCTCCAGGCCCAGTAGG < 41bp 1 0.180603924684281 1 0.0939501821994781 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107842027 chrX:107842029 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_32680 0 0 1 SND1 POSTAR2 ENCODE chrX:107841947-107842029
64251 chrX 153031713 153031713 1 + G T SARC 153031732 + 153031712 153031752 41 CGCGGCTGCCTGGCTCTTTCCCCCAGCTGCGGAGGGTTCCT CTCGGCTGCCTGGCTCTTTCCCCCAGCTGCGGAGGGTTCCT < 41bp 1 0.334310081496408 1 0.811307668685913 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PLXNB3 ENSG00000198753 CDS Human protein_coding chrX:153031732 chrX:153031713 synonymous SNV . 0 2 hm5C_associated_SNPs_32681 0 0 2 RBFOX2 POSTAR2 ENCODE chrX:153031705-153031770
64251 chr1 16257991 16257991 1 + G T SARC 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCCCAGGCAGAGAGCAACGTAGATCCAGATCCTGACAG < 41bp 1 0.261861443445508 1 0.11499285697937 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257991 nonsynonymous SNV 0.005 0 33 hm5C_associated_SNPs_32682 0 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16257920-16258020
64251 chr1 89298797 89298797 1 + G T SARC 89298809 + 89298789 89298829 41 TGGGGCTAGCGAGAAAGATGCAGAGGATGTAAAAAAGCACC TGGGGCTATCGAGAAAGATGCAGAGGATGTAAAAAAGCACC < 41bp 1 0.503974746236145 1 0.753382086753845 experiment 0.99205050752771 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKN2 ENSG00000065243 CDS Human protein_coding chr1:89298809 chr1:89298797 nonsynonymous SNV 0.987 1 9 hm5C_associated_SNPs_32683 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:89298762-89298801
64251 chr1 150483634 150483634 1 + G T SARC 150483635 + 150483615 150483655 41 TATTCCCGCTGCTGCCACTGCCGCAGCCACACAAACCGCCT TATTCCCGCTGCTGCCACTTCCGCAGCCACACAAACCGCCT < 41bp 1 0.664871016171498 1 0.77140885591507 experiment 0.670257967657005 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ECM1 ENSG00000143369 CDS Human protein_coding chr1:150483635 chr1:150483634 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_32684 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:150483613-150483634
64251 chr2 32689585 32689585 1 + G T SARC 32689581 + 32689561 32689601 41 TTTACTTCTTTTGCAGAAAGCAAAGCTGGAAGCCAAGTTAC TTTACTTCTTTTGCAGAAAGCAAATCTGGAAGCCAAGTTAC < 41bp 1 0.0767645363073865 1 0.129403412342072 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32689581 chr2:32689585 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_32685 0 0 1 BUD13 POSTAR2 ENCODE chr2:32689583-32689624
64251 chr3 14487264 14487264 1 + G T SARC 14487265 + 14487245 14487285 41 TTTATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTT TTTATTTTCCTGTTTGGGATCGGCCTGCCTGTGTTTTTCTT < 41bp 1 0.304456362244892 1 0.397847712039948 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487265 chr3:14487264 nonsynonymous SNV 0.997 2 20 hm5C_associated_SNPs_32687 0 0 7 BUD13 POSTAR2 ENCODE chr3:14487249-14487364
64251 chr3 14487264 14487264 1 + G T SARC 14487269 + 14487249 14487289 41 TTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTTGGAG TTTTCCTGTTTGGGATCGGCCTGCCTGTGTTTTTCTTGGAG < 41bp 1 0.299671422292956 1 0.188096910715103 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487269 chr3:14487264 nonsynonymous SNV 0.997 2 16 hm5C_associated_SNPs_32688 0 0 7 BUD13 POSTAR2 ENCODE chr3:14487249-14487364
64251 chr4 48835484 48835484 1 + G T SARC 48835494 + 48835474 48835514 41 AATGATGAAAGCTTCTGGTTCAGATGTGAGTTCAATTTTCT AATGATGAAATCTTCTGGTTCAGATGTGAGTTCAATTTTCT < 41bp 1 0.309637640737934 1 0.304851770401001 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48835494 chr4:48835484 nonsynonymous SNV 0.993 3 11 hm5C_associated_SNPs_32689 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:48835421-48835490
64251 chr4 123160803 123160803 1 + G T SARC 123160814 + 123160794 123160834 41 AAGTACTAAGAGTCTTACTGCTGCTTTCTATGGGGACAAGC AAGTACTAATAGTCTTACTGCTGCTTTCTATGGGGACAAGC < 41bp 1 0.108631544160085 1 0.0681392550468445 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123160814 chr4:123160803 nonsynonymous SNV 0.995 3 10 hm5C_associated_SNPs_32690 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:123160770-123160808
64251 chr5 177019607 177019607 1 + G T SARC 177019588 + 177019568 177019608 41 CCCTCAAGGAAACTACCGGACGCAGCTGTATGACAAGCAGC CCCTCAAGGAAACTACCGGACGCAGCTGTATGACAAGCATC < 41bp 1 0.595333726017429 1 0.203102797269821 experiment 0.809332547965143 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019588 chr5:177019607 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_32691 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 177019607 177019607 1 + G T SARC 177019593 + 177019573 177019613 41 AAGGAAACTACCGGACGCAGCTGTATGACAAGCAGCGGGAG AAGGAAACTACCGGACGCAGCTGTATGACAAGCATCGGGAG < 41bp 1 0.744581016135538 1 0.658331453800201 experiment 0.510837967728925 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019593 chr5:177019607 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_32692 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr5 177019607 177019607 1 + G T SARC 177019601 + 177019581 177019621 41 TACCGGACGCAGCTGTATGACAAGCAGCGGGAGGAGTACCA TACCGGACGCAGCTGTATGACAAGCATCGGGAGGAGTACCA < 41bp 1 0.61152749927808 1 0.419057607650757 experiment 0.77694500144384 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019601 chr5:177019607 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_32693 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr6 7231515 7231515 1 + G T SARC 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGATCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC < 41bp 1 0.615679011285865 1 0.965041100978851 experiment 0.768641977428271 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231515 nonsynonymous SNV 0.997 4 6 hm5C_associated_SNPs_32694 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:7231491-7231541
64251 chr6 21000494 21000494 1 + G T SARC 21000514 + 21000494 21000534 41 GCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGT TCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGT < 41bp 1 0.192125955678575 1 0.047011137008667 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDKAL1 ENSG00000145996 CDS Human protein_coding chr6:21000514 chr6:21000494 nonsynonymous SNV 0.983 0 1 hm5C_associated_SNPs_32695 0 0 2 EWSR1 POSTAR2 SRX029344 chr6:21000464-21000494
64251 chr6 168363201 168363201 1 + G T SARC 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAGGCAAGAGGAAGAGCTCCGGCGGCAGGAGGAGGAGCG < 41bp 1 0.350675714668283 1 0.66991776227951 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363201 nonsynonymous SNV 0.005 1 20 hm5C_associated_SNPs_32696 0 0 7 FTO POSTAR2 ENCODE chr6:168363151-168363228
64251 chr7 99702543 99702543 1 + G T SARC 99702547 + 99702527 99702567 41 GAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA GAGATTCGGCTCAAGATCTTCCTTCCTAGCGGCTCTGGTGA < 41bp 1 0.0294130273247664 1 0.162442773580551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702547 chr7:99702543 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_32697 0 0 2 BUD13 POSTAR2 ENCODE chr7:99702493-99702553
64251 chr7 99747142 99747142 1 + G T SARC 99747129 + 99747109 99747149 41 CTTTACCCACTAGACTTCTGCGCTGACCCAGGGGCTGGAGC CTTTACCCACTAGACTTCTGCGCTGACCCAGGGTCTGGAGC < 41bp 1 0.305455331206378 1 0.0612159073352814 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99747129 chr7:99747142 synonymous SNV . 0 34 hm5C_associated_SNPs_32698 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:99747121-99747150
64251 chr8 22447210 22447210 1 + G T SARC 22447218 + 22447198 22447238 41 CCCGACAGTCCAGCTCCTTTCGGCTCTTGCAGGAAGCCCTG CCCGACAGTCCATCTCCTTTCGGCTCTTGCAGGAAGCCCTG < 41bp 1 0.688466216547235 1 0.166412681341171 experiment 0.623067566905529 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PDLIM2 ENSG00000120913;ENSG00000248235 CDS Human other chr8:22447218 chr8:22447210 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_32699 0 0 2 PPIG POSTAR2 ENCODE chr8:22447209-22447288
64251 chr11 63662717 63662717 1 + G T SARC 63662715 + 63662695 63662735 41 CAGCCACCTCTGCTGATGAGCAGCCCCACATTGGAAACTAC CAGCCACCTCTGCTGATGAGCATCCCCACATTGGAAACTAC < 41bp 1 0.0456297249499318 1 0.0755954682826996 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK2 ENSG00000072518 CDS Human protein_coding chr11:63662715 chr11:63662717 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_32701 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63662703-63662738
64251 chr11 102094462 102094462 1 + G T SARC 102094453 + 102094433 102094473 41 TCAGGAATTGAGAACAATGACGACCAATAGCTCAGATCCTT TCAGGAATTGAGAACAATGACGACCAATATCTCAGATCCTT < 41bp 1 0.423438838185474 1 0.100971966981888 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YAP1 ENSG00000137693 CDS Human protein_coding chr11:102094453 chr11:102094462 nonsynonymous SNV 0.988 4 30 hm5C_associated_SNPs_32702 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:102094424-102094478
64251 chr11 125514418 125514418 1 + G T SARC 125514419 + 125514399 125514439 41 ACATGTAGAACCCCTGGCAGCGGTTGGTCAAAAGAATGACA ACATGTAGAACCCCTGGCATCGGTTGGTCAAAAGAATGACA < 41bp 1 0.215254660907357 1 0.308388948440552 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514419 chr11:125514418 nonsynonymous SNV 0.996 4 20 hm5C_associated_SNPs_32703 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125514404-125514429
64251 chr12 113596715 113596715 1 - G T SARC 113596717 - 113596697 113596737 41 GCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGATG GCGCCTTCGGCCGGGGTGCCCGATCCAAGAAGGGCAAGATG < 41bp 1 0.259900528605928 1 0.475106567144394 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596717 chr12:113596715 synonymous SNV . 0 23 hm5C_associated_SNPs_32704 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr12 113596715 113596715 1 - G T SARC 113596718 - 113596698 113596738 41 GGCGCCTTCGGCCGGGGTGCCCGCTCCAAGAAGGGCAAGAT GGCGCCTTCGGCCGGGGTGCCCGATCCAAGAAGGGCAAGAT < 41bp 1 0.183064722382617 1 0.653153419494629 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596718 chr12:113596715 synonymous SNV . 0 24 hm5C_associated_SNPs_32705 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:113596708-113596734
64251 chr17 34147387 34147387 1 + G T SARC 34147392 + 34147372 34147412 41 AGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGA AGCAGAGCTCATATATCCAGCAACCATATAATAACCAGGGA < 41bp 1 0.188546128199228 1 0.311992108821869 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF15 ENSG00000172660 CDS Human other chr17:34147392 chr17:34147387 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_32706 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:34147340-34147420
64251 chr17 40716085 40716085 1 + G T SARC 40716079 + 40716059 40716099 41 TCCTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG TCCTTGACTTTTGATGTCATCCCCCTTCTGGACCCCTATGG < 41bp 1 0.240164894223051 1 0.0920664370059967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40716079 chr17:40716085 synonymous SNV . 0 27 hm5C_associated_SNPs_32707 0 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr17:40716055-40716085
64251 chr19 17836868 17836868 1 + G T SARC 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTCGATCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT < 41bp 1 0.456273879490605 1 0.396854400634766 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836868 nonsynonymous SNV 0.155 0 9 hm5C_associated_SNPs_32708 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836868 17836868 1 + G T SARC 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTCGATCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA < 41bp 1 0.343937489208033 1 0.468171328306198 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836868 nonsynonymous SNV 0.155 0 7 hm5C_associated_SNPs_32709 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 48248836 48248836 1 + G T SARC 48248821 + 48248801 48248841 41 TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTG TTCTTCCTTTGACAAGATGGCGGCAGGAGGCAGTGTCGTTG < 41bp 1 0.731618022039694 1 0.452939093112946 experiment 0.536763955920611 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248821 chr19:48248836 nonsynonymous SNV 0.000 0 36 hm5C_associated_SNPs_32710 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr20 62312058 62312058 1 + G T SARC 62312059 + 62312039 62312079 41 GGCCGGACTGCAGAAGCTGGCGGACATTATCCAGGTGGGGC GGCCGGACTGCAGAAGCTGTCGGACATTATCCAGGTGGGGC < 41bp 1 0.293401447435951 1 0.501323640346527 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62312059 chr20:62312058 nonsynonymous SNV 0.510 0 20 hm5C_associated_SNPs_32711 0 0 4 PRPF8 POSTAR2 ENCODE chr20:62312029-62312114
64251 chr1 193205386 193205386 1 + G T SARC 193205390 + 193205370 193205410 41 ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGTG ACTTTTCTACTTGTAGTGACCGCGTTGTAGCCGTTTTTGTG < 41bp 1 0.747480753476708 1 0.39929324388504 experiment 0.505038493046584 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC73 ENSG00000134371 CDS Human protein_coding chr1:193205390 chr1:193205386 nonsynonymous SNV 0.722 5 17 hm5C_associated_SNPs_32716 0 0 4 U2AF1 POSTAR2 ENCODE chr1:193205372-193205441
64251 chr3 130683797 130683797 1 + T A SARC 130683793 + 130683773 130683813 41 TAATGATTTAATTCTTTAGGCTGCTGTAATGTGATTTGTTC TAATGATTTAATTCTTTAGGCTGCAGTAATGTGATTTGTTC < 41bp 1 0.489586776150663 1 0.394155621528625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130683793 chr3:130683797 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_32717 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:130683782-130683814
64251 chr17 25633870 25633870 1 + G T SARC 25633851 + 25633831 25633871 41 GGGCATCAGAATTGGGTGTACAGCTGTGCATTCTCTCCTGA GGGCATCAGAATTGGGTGTACAGCTGTGCATTCTCTCCTTA < 41bp 1 0.751474639055665 1 0.0916449129581451 experiment 0.49705072188867 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WSB1 ENSG00000109046 CDS Human protein_coding chr17:25633851 chr17:25633870 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_32718 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:25633838-25633876
64251 chr16 50342240 50342240 1 + C T SARC 50342243 + 50342223 50342263 41 TTCCCTCCTCTCCAGGACGGCGGCACTGGGTGTGTCCTTCG TTCCCTCCTCTCCAGGATGGCGGCACTGGGTGTGTCCTTCG < 41bp 1 0.648760011491133 1 0.342694759368896 experiment 0.702479977017733 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY7 ENSG00000121281 CDS Human protein_coding chr16:50342243 chr16:50342240 nonsynonymous SNV 0.007 0 18 hm5C_associated_SNPs_32719 0 0 8 DDX24 POSTAR2 ENCODE chr16:50342209-50342325
64251 chr12 132325123 132325123 1 + G T SARC 132325139 + 132325119 132325159 41 GTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACAC GTCCTGACGTTCCCACGGGACTCACCACTGGGGCACGACAC < 41bp 1 0.161206532721059 1 0.171579331159592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132325139 chr12:132325123 nonsynonymous SNV 0.927 1 5 hm5C_associated_SNPs_32720 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:132325073-132325162
64251 chr15 74918210 74918210 1 + G T SARC 74918204 + 74918184 74918224 41 ACATGTGCATCGCCTTTGAGCTCCTGGGCAAGAACACCTTT ACATGTGCATCGCCTTTGAGCTCCTGTGCAAGAACACCTTT < 41bp 1 0.483755629618063 1 0.119519084692001 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74918204 chr15:74918210 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_32721 0 0 6 DDX24 POSTAR2 ENCODE chr15:74918131-74918282
64251 chr1 10402206 10402206 1 + G A SARC 10402207 + 10402187 10402227 41 AGCAGCACCCACTTCATCTGCAAGGACAGGAGCTTAACAGG AGCAGCACCCACTTCATCTACAAGGACAGGAGCTTAACAGG < 41bp 1 0.314173203256746 1 0.723155200481415 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10402207 chr1:10402206 synonymous SNV . 0 20 hm5C_associated_SNPs_32722 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:10402196-10402235
64251 chr4 184192380 184192380 1 + G T SARC 184192371 + 184192351 184192391 41 CTGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGAC CTGTATTTCAACCAAACCAGCCGTTAGTATATTCTATAGAC < 41bp 1 0.023661770715509 1 0.0524653792381287 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184192371 chr4:184192380 nonsynonymous SNV 0.008 1 30 hm5C_associated_SNPs_32723 0 0 3 GRWD1 POSTAR2 ENCODE chr4:184192374-184192391
64251 chr5 141353195 141353195 1 + G T SARC 141353198 + 141353178 141353218 41 CAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGG CAGGAGGATGAATTGCTTGCCCTGGCAAGTATTTACGATGG < 41bp 1 0.405701722709058 1 0.180965334177017 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141353198 chr5:141353195 synonymous SNV . 0 18 hm5C_associated_SNPs_32724 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:141353152-141353203
64251 chr10 94773974 94773974 1 + C T SARC 94773982 + 94773962 94774002 41 TCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCT TCTGAGCCTGTGTCAGGATTCCAGGGGGATACCCTGCAGCT < 41bp 1 0.716025775328302 1 0.878320217132568 experiment 0.567948449343397 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94773982 chr10:94773974 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_32725 0 0 6 SF3B4 POSTAR2 ENCODE chr10:94773938-94773995
64251 chr19 49993810 49993810 1 + G A SARC 49993825 + 49993805 49993845 41 CAGCCGCATCTTCTGGCGGACCGTGCGAGGTGAGCAGAGCG CAGCCACATCTTCTGGCGGACCGTGCGAGGTGAGCAGAGCG < 41bp 1 0.163380931544708 1 0.35992220044136 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993825 chr19:49993810 nonsynonymous SNV 0.995 1 6 hm5C_associated_SNPs_32726 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr5 176524620 176524620 1 + C T SARC 176524624 + 176524604 176524644 41 ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGC ATTCTGTCTTCAGCCATGACCCCCTGCCATTGGGATCCAGC < 41bp 1 0.171682235864104 1 0.0344964563846588 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524624 chr5:176524620 synonymous SNV . 0 17 hm5C_associated_SNPs_32728 0 0 3 DDX55 POSTAR2 ENCODE chr5:176524591-176524710
64251 chr5 176524620 176524620 1 + C T SARC 176524627 + 176524607 176524647 41 CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC CTGTCTTCAGCCATGACCCCCTGCCATTGGGATCCAGCTCC < 41bp 1 0.303645756772742 1 0.0377809405326843 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524627 chr5:176524620 synonymous SNV . 0 14 hm5C_associated_SNPs_32729 0 0 3 DDX55 POSTAR2 ENCODE chr5:176524591-176524710
64251 chr15 40284991 40284991 1 + G T SARC 40284974 + 40284954 40284994 41 GTTTTCCTCCACACAGGTCACTTAACTGGGATGGTTGGCAC GTTTTCCTCCACACAGGTCACTTAACTGGGATGGTTGTCAC < 41bp 1 0.387676215306771 1 0.680598318576813 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40284974 chr15:40284991 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_32734 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr15:40284976-40284997
64251 chr16 19126060 19126060 1 + C T SKCM 19126077 + 19126057 19126097 41 TTCCGAGAGCCGGGCCTCAGCATCCTGCTGGAGAGTTACTA TTCTGAGAGCCGGGCCTCAGCATCCTGCTGGAGAGTTACTA < 41bp 1 0.25825554012127 1 0.39610230922699 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ITPRIPL2 ENSG00000205730;ENSG00000261427 CDS Human other chr16:19126077 chr16:19126060 stopgain 0.144 0 4 hm5C_associated_SNPs_32736 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:19126050-19126065
64251 chr19 55817708 55817708 1 + C T SKCM 55817715 + 55817695 55817735 41 GTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTC GTCTTCCAAAAGCTCGTCCGCTTCCAGGTGGACATCAGCTC < 41bp 1 0.116255564091905 1 0.141448020935059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817715 chr19:55817708 nonsynonymous SNV 0.939 4 14 hm5C_associated_SNPs_32737 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr19 55817708 55817708 1 + C T SKCM 55817719 + 55817699 55817739 41 TCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCT TCCAAAAGCTCGTCCGCTTCCAGGTGGACATCAGCTCCTCT < 41bp 1 0.745163373126499 1 0.945143461227417 experiment 0.509673253747002 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817719 chr19:55817708 nonsynonymous SNV 0.939 4 10 hm5C_associated_SNPs_32738 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr14 64484368 64484368 1 + G A SKCM 64484376 + 64484356 64484396 41 CTCTAGCTTTGTGGGACAAACTTTTTAACTTAAAAAATGTC CTCTAGCTTTGTAGGACAAACTTTTTAACTTAAAAAATGTC < 41bp 1 0.0357544010813386 1 0.0849299132823944 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64484376 chr14:64484368 stopgain 1.000 1 13 hm5C_associated_SNPs_32740 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr14:64484340-64484387
64251 chr15 64410326 64410326 1 + G T SKCM 64410330 + 64410310 64410350 41 TTTTAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAA TTTTAGATGCCACAGTTGAGCTATCCTTGGACAGCACACAA < 41bp 1 0.0801705617519913 1 0.179346561431885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410330 chr15:64410326 synonymous SNV . 0 17 hm5C_associated_SNPs_32741 0 0 4 BUD13 POSTAR2 ENCODE chr15:64410314-64410361
64251 chr15 64410326 64410326 1 + G T SKCM 64410334 + 64410314 64410354 41 AGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATA AGATGCCACAGTTGAGCTATCCTTGGACAGCACACAAAATA < 41bp 1 0.0404663248447787 1 0.127643793821335 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410334 chr15:64410326 synonymous SNV . 0 13 hm5C_associated_SNPs_32742 0 0 4 BUD13 POSTAR2 ENCODE chr15:64410314-64410361
64251 chr7 73944161 73944161 1 + C T SKCM 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATTCCCTTCAAGCGCCCCTGCACTT < 41bp 1 0.0225774564586283 1 0.127998054027557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944161 synonymous SNV . 0 19 hm5C_associated_SNPs_32745 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr16 2818193 2818193 1 + C T SKCM 2818203 + 2818183 2818223 41 TCCTCCTCCTCCTCTGGCTCCAGTTCTAGTGACTCAGAGGG TCCTCCTCCTTCTCTGGCTCCAGTTCTAGTGACTCAGAGGG < 41bp 1 0.094500917447178 1 0.200719058513641 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818203 chr16:2818193 nonsynonymous SNV 0.661 3 11 hm5C_associated_SNPs_32747 0 0 38 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2818170-2818198
64251 chr4 183601743 183601743 1 + C T SKCM 183601733 + 183601713 183601753 41 TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTG TGTAGTGGCAACGGGCAGTACTCCAAGGGCTGCTGCCTGTG < 41bp 1 0.758368294671519 1 0.986494719982147 experiment 0.483263410656962 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183601733 chr4:183601743 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_32749 0 0 4 TAF15 POSTAR2 SRX029345 chr4:183601740-183601760
64251 chr17 19237303 19237303 1 + C T SKCM 19237313 + 19237293 19237333 41 TTAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGACACTG TTAACCCTTTTCAGGTGAACCAGCCCCAGCCGCTGACACTG < 41bp 1 0.524088126036718 1 0.408749282360077 experiment 0.951823747926564 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPN2 ENSG00000072134 CDS Human protein_coding chr17:19237313 chr17:19237303 synonymous SNV . 0 11 hm5C_associated_SNPs_32750 0 0 2 PPIG POSTAR2 ENCODE chr17:19237295-19237423
64251 chr9 135919197 135919197 1 + C T SKCM 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTTCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.0544232451313802 1 0.0231720209121704 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919197 synonymous SNV . 0 3 hm5C_associated_SNPs_32751 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr1 200817237 200817237 1 + G A SKCM 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGAAATCACTCGTTCTATTAGTAATGAAGGA < 41bp 1 0.0629906424411444 1 0.541677892208099 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817237 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_32752 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200817234-200817252
64251 chr15 41192210 41192210 1 + C T SKCM 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCCGAGATGTTTGGCGCACCTA < 41bp 1 0.295486379567776 1 0.490027755498886 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192210 synonymous SNV . 0 30 hm5C_associated_SNPs_32753 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr15 41192210 41192210 1 + C T SKCM 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCCGAGATGTTTGGCGCACCTAT < 41bp 1 0.771275649866195 1 0.864252090454102 experiment 0.45744870026761 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192210 synonymous SNV . 0 29 hm5C_associated_SNPs_32754 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr17 48631746 48631746 1 + C T SKCM 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTTG < 41bp 1 0.0491419376693786 1 0.0126864910125732 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631746 nonsynonymous SNV 0.833 2 40 hm5C_associated_SNPs_32755 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr12 53427604 53427604 1 + C T SKCM 53427592 + 53427572 53427612 41 AAGTTTCATTTAACTTAGGTCCCCCCCAAAGACCCAAACTG AAGTTTCATTTAACTTAGGTCCCCCCCAAAGATCCAAACTG < 41bp 1 0.0431724433547317 1 0.0445610582828522 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53427592 chr12:53427604 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_32764 0 0 6 LIN28B POSTAR2 ENCODE chr12:53427589-53427622
64251 chr20 47705915 47705915 1 + C T SKCM 47705919 + 47705899 47705939 41 TGGTGTTTACTGAAATCTTACAAAATGATGTGCAAGGTAAG TGGTGTTTACTGAAATTTTACAAAATGATGTGCAAGGTAAG < 41bp 1 0.37883299865992 1 0.354199767112732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47705919 chr20:47705915 synonymous SNV . 0 17 hm5C_associated_SNPs_32765 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47705794-47705933
64251 chr19 3434309 3434309 1 + C T SKCM 3434306 + 3434286 3434326 41 ACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG ACTGGAACAGGACCCAACTTCTCTCTGGGGGAGCTGCAGGG < 41bp 1 0.19875344957202 1 0.671404898166656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFIC ENSG00000141905 CDS Human protein_coding chr19:3434306 chr19:3434309 synonymous SNV . 0 24 hm5C_associated_SNPs_32766 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3434296-3434324
64251 chrX 41198307 41198307 1 + C T SKCM 41198304 + 41198284 41198324 41 TTTAGAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAG TTTAGAAGGGCGCTATATTCCTCTTCATTTAAGGAACCGAG < 41bp 1 0.168400124071342 1 0.269516468048096 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41198304 chrX:41198307 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_32767 0 0 36 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:41198295-41198320
64251 chr16 89789747 89789747 1 + C T SKCM 89789767 + 89789747 89789787 41 CCTGCCCCACCTTCAGAGGACACTGTCCTCCGAGTACTGCG TCTGCCCCACCTTCAGAGGACACTGTCCTCCGAGTACTGCG < 41bp 1 0.30110760047386 1 0.0287642478942871 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789767 chr16:89789747 nonsynonymous SNV 0.572 0 1 hm5C_associated_SNPs_32769 0 0 1 DDX24 POSTAR2 ENCODE chr16:89789738-89789762
64251 chr19 3434308 3434308 1 + C T SKCM 3434306 + 3434286 3434326 41 ACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG ACTGGAACAGGACCCAACTTCTTCCTGGGGGAGCTGCAGGG < 41bp 1 0.162356761745631 1 0.525382518768311 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFIC ENSG00000141905 CDS Human protein_coding chr19:3434306 chr19:3434308 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_32781 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3434296-3434324
64251 chr11 17316991 17316991 1 + G A SKCM 17316973 + 17316953 17316993 41 ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGGAA ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGAAA < 41bp 1 0.63417089172426 1 0.111795574426651 experiment 0.73165821655148 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17316973 chr11:17316991 nonsynonymous SNV 0.997 0 39 hm5C_associated_SNPs_32782 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:17316970-17317000
64251 chr1 150325390 150325390 1 + A G SKCM 150325400 + 150325380 150325420 41 GCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTG GCATTTCAAAGAGCATGGGGCTGAACACTACTGGGACCTTG < 41bp 1 0.632505186241822 1 0.10192346572876 experiment 0.734989627516355 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150325400 chr1:150325390 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_32783 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150325341-150325471
64251 chr7 99956644 99956644 1 + G A SKCM 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGA < 41bp 1 0.573048323795187 1 0.772234559059143 experiment 0.853903352409626 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956644 nonsynonymous SNV 0.000 1 41 hm5C_associated_SNPs_32784 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99956616-99956657
64251 chr7 99956644 99956644 1 + G A SKCM 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTATTTCTGCCGAGTCGAGCTGGACACCCGAAGATCAGGG < 41bp 1 0.748456715169492 1 0.800471663475037 experiment 0.503086569661017 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956644 nonsynonymous SNV 0.000 1 32 hm5C_associated_SNPs_32785 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99956616-99956657
64251 chr7 99956644 99956644 1 + G A SKCM 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCGAGTCGAGCTGGACACCCGAAGATCAGGGAGGCA < 41bp 1 0.293124332882818 1 0.0301946699619293 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956644 nonsynonymous SNV 0.000 1 27 hm5C_associated_SNPs_32786 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99956616-99956657
64251 chr7 99956643 99956643 1 + G A SKCM 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCAG < 41bp 1 0.592411443025867 1 0.750221908092499 experiment 0.815177113948267 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956643 nonsynonymous SNV 0.000 0 40 hm5C_associated_SNPs_32794 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956643 99956643 1 + G A SKCM 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTATTTCTGCCGAGTCGAGCTGGACACCCAGAGATCAGGG < 41bp 1 0.784462850917063 1 0.801349341869354 experiment 0.431074298165874 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956643 nonsynonymous SNV 0.000 0 31 hm5C_associated_SNPs_32795 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956643 99956643 1 + G A SKCM 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCGAGTCGAGCTGGACACCCAGAGATCAGGGAGGCA < 41bp 1 0.240525085387653 1 0.0302732884883881 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956643 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_32796 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr1 242042459 242042459 1 + C T SKCM 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACTTCTTTGCC < 41bp 1 0.181904761702782 1 0.167077273130417 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042459 synonymous SNV . 0 33 hm5C_associated_SNPs_32797 0 0 9 SRSF1 POSTAR2 GSE83923,GSM2221663 chr1:242042420-242042460
64251 chrX 73046480 73046480 1 - C T SKCM 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACCTGGGGAAATCCCAAGATGAAAACCCTAAAC < 41bp 1 0.65750013956348 1 0.628204226493835 experiment 0.684999720873041 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046480 . . 0 31 hm5C_associated_SNPs_32807 0 0 87 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr17 77757718 77757718 1 + C T SKCM 77757717 + 77757697 77757737 41 CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGA CCAAACCCGAGCTGAAGGATCTCATCCGGAAGAAGCGGGGA < 41bp 1 0.297351307526731 1 0.183597564697266 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77757717 chr17:77757718 nonsynonymous SNV 0.977 1 22 hm5C_associated_SNPs_32808 0 0 1 PPIG POSTAR2 ENCODE chr17:77757695-77757764
64251 chr7 128478854 128478854 1 + G A SKCM 128478838 + 128478818 128478858 41 CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGAAAGG < 41bp 1 0.0564173367999876 1 0.0329538881778717 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128478838 chr7:128478854 nonsynonymous SNV 0.961 1 37 hm5C_associated_SNPs_32809 0 0 1 SF3B4 POSTAR2 ENCODE chr7:128478850-128478893
64251 chr7 116371900 116371900 1 + G A SKCM 116371902 + 116371882 116371922 41 ATCTTGGGACATCAGAGGGTCGCTTCATGCAGGTAAGTGCT ATCTTGGGACATCAGAGGATCGCTTCATGCAGGTAAGTGCT < 41bp 1 0.253262198191103 1 0.0819669365882874 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MET ENSG00000105976 CDS Human protein_coding chr7:116371902 chr7:116371900 nonsynonymous SNV 0.998 4 19 hm5C_associated_SNPs_32811 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:116371878-116371903
64251 chr17 4926878 4926878 1 + C T SKCM 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCCGTCAGCCCGGCCCCCCTTGCCACCACTGTCA < 41bp 1 0.0679295578147425 1 0.0209836065769196 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926878 nonsynonymous SNV 0.137 1 28 hm5C_associated_SNPs_32812 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926878 4926878 1 + C T SKCM 4926874 + 4926854 4926894 41 GCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGC GCATGCCGTCAGCCCGGCCCCCCTTGCCACCACTGTCAAGC < 41bp 1 0.119239950202512 1 0.0242152512073517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926874 chr17:4926878 nonsynonymous SNV 0.137 1 25 hm5C_associated_SNPs_32813 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926878 4926878 1 + C T SKCM 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG CGTCAGCCCGGCCCCCCTTGCCACCACTGTCAAGCTGGGAG < 41bp 1 0.0890287469771412 1 0.112455427646637 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926878 nonsynonymous SNV 0.137 1 19 hm5C_associated_SNPs_32814 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926878 4926878 1 + C T SKCM 4926883 + 4926863 4926903 41 CAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG CAGCCCGGCCCCCCTTGCCACCACTGTCAAGCTGGGAGCGG < 41bp 1 0.165167392489887 1 0.0617383718490601 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926883 chr17:4926878 nonsynonymous SNV 0.137 1 16 hm5C_associated_SNPs_32815 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr4 79173607 79173607 1 + G A SKCM 79173606 + 79173586 79173626 41 CTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC CTTGCAATCATGGGGAAGTCCAATGTACCCCCCAACCATGC < 41bp 1 0.169577628511131 1 0.217933356761932 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79173606 chr4:79173607 nonsynonymous SNV 0.161 0 22 hm5C_associated_SNPs_32820 0 0 3 PPIG POSTAR2 ENCODE chr4:79173589-79173706
64251 chr22 18567993 18567993 1 + C T SKCM 18567978 + 18567958 18567998 41 CTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGATCCTCTG CTGCCCTTCAAAAAGAGTCTCCTGGCTGCCTTGATTCTCTG < 41bp 1 0.158491861540422 1 0.0920565128326416 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX26 ENSG00000215193 CDS Human protein_coding chr22:18567978 chr22:18567993 synonymous SNV . 0 36 hm5C_associated_SNPs_32821 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:18567944-18568004
64251 chr8 28574495 28574495 1 + C T SKCM 28574488 + 28574468 28574508 41 GTGGCCCAGTCCACCTTCTACACTGTCCAGTACAGACCTGG GTGGCCCAGTCCACCTTCTACACTGTCTAGTACAGACCTGG < 41bp 1 0.200335059260419 1 0.18260195851326 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574488 chr8:28574495 stopgain 0.980 1 28 hm5C_associated_SNPs_32840 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574480-28574520
64251 chr19 35749940 35749940 1 + G A SKCM 35749925 + 35749905 35749945 41 CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATAAGGCC < 41bp 1 0.765742461777295 1 0.915842533111572 experiment 0.468515076445409 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35749925 chr19:35749940 nonsynonymous SNV 0.894 4 36 hm5C_associated_SNPs_32841 0 0 1 SND1 POSTAR2 ENCODE chr19:35749922-35749946
64251 chr15 52356175 52356175 1 + C T SKCM 52356166 + 52356146 52356186 41 ACTTTGATATTGATGAAGTTCAGCTTGATCCAAGAGCTCTG ACTTTGATATTGATGAAGTTCAGCTTGATTCAAGAGCTCTG < 41bp 1 0.584323652134519 1 0.187166661024094 experiment 0.831352695730962 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356166 chr15:52356175 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_32843 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:52356160-52356180
64251 chr22 32217491 32217491 1 + C T SKCM 32217507 + 32217487 32217527 41 GGGCCATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG GGGCTATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG < 41bp 1 0.562921491606182 1 0.525304734706879 experiment 0.874157016787635 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32217507 chr22:32217491 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_32844 0 0 1 PPIG POSTAR2 ENCODE chr22:32217487-32217563
64251 chr15 75644680 75644680 1 + C T SKCM 75644692 + 75644672 75644712 41 ATCCCCCCCTTTGAGAAGGCCCGCTCGGTCCTGGAGGCCCT ATCCCCCCTTTTGAGAAGGCCCGCTCGGTCCTGGAGGCCCT < 41bp 1 0.146519445969863 1 0.0549529492855072 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75644692 chr15:75644680 synonymous SNV . 0 9 hm5C_associated_SNPs_32845 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:75644679-75644680
64251 chr7 5269331 5269331 1 + G A SKCM 5269313 + 5269293 5269333 41 CTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGGAA CTGCCCCTTAGTCACTCAGACATACGGCGCAGCTGCAGAAA < 41bp 1 0.116141277055206 1 0.0992255508899689 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269313 chr7:5269331 nonsynonymous SNV 0.017 0 39 hm5C_associated_SNPs_32846 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5269301-5269331
64251 chr17 900385 900385 1 + G A SKCM 900378 + 900358 900398 41 GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC GAGGGTTGCTTGGGCAGCGACTGTCATAGCGGCGGCCGCCC < 41bp 1 0.536017573527939 1 0.325056672096252 experiment 0.927964852944122 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900378 chr17:900385 nonsynonymous SNV 0.841 1 28 hm5C_associated_SNPs_32847 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:900380-900400
64251 chr2 32666457 32666457 1 + C T SKCM 32666438 + 32666418 32666458 41 AATGAAAATACAAGTGGCACCCGTAAATCTGAAAACCTCCG AATGAAAATACAAGTGGCACCCGTAAATCTGAAAACCTCTG < 41bp 1 0.0437275089420826 1 0.465450286865234 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32666438 chr2:32666457 nonsynonymous SNV 0.996 3 40 hm5C_associated_SNPs_32849 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:32666448-32666478
64251 chr16 66919225 66919225 1 + G A SKCM 66919216 + 66919196 66919236 41 AGGCTACTGGGCGTCCTCATCCCCTGCAGGGCCTTTGGGGA AGGCTACTGGGCGTCCTCATCCCCTGCAGAGCCTTTGGGGA < 41bp 1 0.449121632592147 1 0.822261095046997 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919216 chr16:66919225 synonymous SNV . 0 30 hm5C_associated_SNPs_32850 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:66919220-66919240
64251 chr11 67052417 67052417 1 + C T SKCM 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCTCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG < 41bp 1 0.758329440895803 1 0.904121518135071 experiment 0.483341118208394 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052417 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_32851 0 0 3 DDX6 POSTAR2 ENCODE chr11:67052414-67052454
64251 chr7 100484522 100484522 1 + C T SKCM 100484519 + 100484499 100484539 41 GGGGAGCAGCGGGGGCGCTCCTCCTGAGGAGCCTCCTAAGG GGGGAGCAGCGGGGGCGCTCCTCTTGAGGAGCCTCCTAAGG < 41bp 1 0.450102154738825 1 0.368268579244614 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100484519 chr7:100484522 nonsynonymous SNV 0.560 0 24 hm5C_associated_SNPs_32852 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100484522-100484543
64251 chr19 971922 971922 1 + C T SKCM 971936 + 971916 971956 41 TCTGCTCCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAG TCTGCTTCCAACAAAGGAGGCGGCGGCGGCGGCGGCAGCAG < 41bp 1 0.781231110732053 1 0.845375657081604 experiment 0.437537778535894 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ARID3A ENSG00000116017 CDS Human protein_coding chr19:971936 chr19:971922 nonsynonymous SNV 0.012 0 7 hm5C_associated_SNPs_32855 0 0 1 PRPF8 POSTAR2 ENCODE chr19:971875-971928
64251 chr17 40936554 40936554 1 + C T SKCM 40936572 + 40936552 40936592 41 CTCCGAGTGCCAGAATGCCGCGCAAATCTACCGCAAGGTCA CTTCGAGTGCCAGAATGCCGCGCAAATCTACCGCAAGGTCA < 41bp 1 0.659565818150963 1 0.2041055560112 experiment 0.680868363698074 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WNK4 ENSG00000126562 CDS Human protein_coding chr17:40936572 chr17:40936554 nonsynonymous SNV 0.938 4 3 hm5C_associated_SNPs_32857 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40936540-40936560
64251 chr1 87805770 87805770 1 + G T SKCM 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCGCCTGGTCCCGGTAGATCGGTTTCACTACATCAATGGC < 41bp 1 0.370436967923982 1 0.183297544717789 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805770 nonsynonymous SNV 1.000 5 16 hm5C_associated_SNPs_32858 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr1 44433324 44433324 1 + C T SKCM 44433322 + 44433302 44433342 41 TCACACTGCTGTGCCGGGGTCTCCATGGCACAGATTACACA TCACACTGCTGTGCCGGGGTCTTCATGGCACAGATTACACA < 41bp 1 0.416857754960035 1 0.234738826751709 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control IPO13 ENSG00000117408 CDS Human protein_coding chr1:44433322 chr1:44433324 synonymous SNV . 0 23 hm5C_associated_SNPs_32859 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44433306-44433333
64251 chr17 29325795 29325795 1 + G A SKCM 29325807 + 29325787 29325827 41 AGCTGTGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA AGCTGTGAAAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA < 41bp 1 0.48909627671591 1 0.208471417427063 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF135 ENSG00000181481 CDS Human protein_coding chr17:29325807 chr17:29325795 synonymous SNV . 0 9 hm5C_associated_SNPs_32860 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:29325767-29325795
64251 chr7 156746923 156746923 1 + C T SKCM 156746911 + 156746891 156746931 41 GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAG GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCTATGCCCAG < 41bp 1 0.57019491897992 1 0.528562724590302 experiment 0.85961016204016 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746911 chr7:156746923 synonymous SNV . 0 33 hm5C_associated_SNPs_32861 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr7:156746909-156746924
64251 chr10 12191670 12191670 1 + C T SKCM 12191687 + 12191667 12191707 41 AATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT AATTATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT < 41bp 1 0.524950813923404 1 0.052834153175354 experiment 0.950098372153192 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191687 chr10:12191670 synonymous SNV . 0 4 hm5C_associated_SNPs_32862 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:12191646-12191674
64251 chr1 32620246 32620246 1 + C T SKCM 32620232 + 32620212 32620252 41 GACAATTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA GACAATTATCGAATGAAGAGCTATAAGAACAATGTTCTAAA < 41bp 1 0.215985578304445 1 0.40153631567955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620232 chr1:32620246 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_32863 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620246 32620246 1 + C T SKCM 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGAGCTATAAGAACAATGTTCTAAACCCTGAAGAAATGAGA < 41bp 1 0.268146940854477 1 0.274502277374268 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620246 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_32864 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620246 32620246 1 + C T SKCM 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGTTCTAAACCCTGAAGAAATGAGACGAAG < 41bp 1 0.203829250054935 1 0.0966490805149078 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620246 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_32865 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620246 32620246 1 + C T SKCM 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGTTCTAAACCCTGAAGAAATGAGACGAAGA < 41bp 1 0.265482791358457 1 0.169824749231339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620246 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_32866 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr11 67052452 67052452 1 + C T SKCM 67052434 + 67052414 67052454 41 TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCG TCCCCAACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCTCG < 41bp 1 0.728193179031826 1 0.903415322303772 experiment 0.543613641936348 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052434 chr11:67052452 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_32867 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052452 67052452 1 + C T SKCM 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCTCGGTAAG < 41bp 1 0.658055344677013 1 0.859665274620056 experiment 0.683889310645974 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052452 nonsynonymous SNV 0.997 1 34 hm5C_associated_SNPs_32868 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052452 67052452 1 + C T SKCM 67052450 + 67052430 67052470 41 GTGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG GTGGCGGGGCGAGGGCGAGGCCTCGGTAAGGAGCCCGTGCG < 41bp 1 0.253750034212103 1 0.690619349479675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052450 chr11:67052452 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_32869 0 0 5 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chrX 73045886 73045886 1 - C T SKCM 73045871 - 73045851 73045891 41 CCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC CCTGGAACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC < 41bp 1 0.67765061841929 1 0.880997180938721 experiment 0.64469876316142 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045871 chrX:73045886 . . 0 6 hm5C_associated_SNPs_32870 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045886 73045886 1 - C T SKCM 73045873 - 73045853 73045893 41 TGCCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT TGCCTGGAACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT < 41bp 1 0.207294889107779 1 0.340099573135376 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045873 chrX:73045886 . . 0 8 hm5C_associated_SNPs_32871 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045886 73045886 1 - C T SKCM 73045890 - 73045870 73045910 41 TATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCCA TATGGAAAGGGTGACTGTGCCTGGAACAAAGCGAGGTCCCA < 41bp 1 0.794070261072331 1 0.662996411323547 experiment 0.411859477855338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045890 chrX:73045886 . . 0 25 hm5C_associated_SNPs_32872 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045886 73045886 1 - C T SKCM 73045891 - 73045871 73045911 41 TTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCC TTATGGAAAGGGTGACTGTGCCTGGAACAAAGCGAGGTCCC < 41bp 1 0.264857632713552 1 0.288152903318405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045891 chrX:73045886 . . 0 26 hm5C_associated_SNPs_32873 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045886 73045886 1 - C T SKCM 73045896 - 73045876 73045916 41 GATGGTTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAG GATGGTTATGGAAAGGGTGACTGTGCCTGGAACAAAGCGAG < 41bp 1 0.245614224609684 1 0.209456890821457 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045896 chrX:73045886 . . 0 31 hm5C_associated_SNPs_32874 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr14 75247117 75247117 1 + C T SKCM 75247109 + 75247089 75247129 41 TGTCCTCTTTTATCTTTAGTCTGAGGACCCAGAAGAAGATG TGTCCTCTTTTATCTTTAGTCTGAGGACTCAGAAGAAGATG < 41bp 1 0.470955937381939 1 0.57405424118042 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YLPM1 ENSG00000119596 CDS Human protein_coding chr14:75247109 chr14:75247117 nonsynonymous SNV 0.994 0 29 hm5C_associated_SNPs_32875 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:75247099-75247134
64251 chr17 7156241 7156241 1 + G T SKCM 7156261 + 7156241 7156281 41 GAGCAAGTGCATATCCTGGGCTGTGAAGTGAGCGAGGAAGA TAGCAAGTGCATATCCTGGGCTGTGAAGTGAGCGAGGAAGA < 41bp 1 0.238048647688632 1 0.0659825503826141 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ELP5 ENSG00000170291 CDS Human protein_coding chr17:7156261 chr17:7156241 stopgain 0.997 1 1 hm5C_associated_SNPs_32876 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7156236-7156265
64251 chr18 55996240 55996240 1 + G A SKCM 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTCCTCGAAGTCGGACAATAACATCAGACAGATCAA < 41bp 1 0.21908453804008 1 0.143678903579712 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996240 nonsynonymous SNV 0.611 1 13 hm5C_associated_SNPs_32877 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr10 7745421 7745421 1 + C T SKCM 7745438 + 7745418 7745458 41 TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA TTTTATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA < 41bp 1 0.764665245042045 1 0.820834279060364 experiment 0.470669509915911 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7745438 chr10:7745421 synonymous SNV . 0 4 hm5C_associated_SNPs_32878 0 0 1 DDX3X POSTAR2 ENCODE chr10:7745420-7745472
64251 chr11 67047159 67047159 1 + G A SKCM 67047163 + 67047143 67047183 41 AGAAGCAGGTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC AGAAGCAGGTGCCTCCAGATCTCTTCCAGGTGTGTGCCTCC < 41bp 1 0.205179768452573 1 0.695061385631561 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047163 chr11:67047159 synonymous SNV . 0 17 hm5C_associated_SNPs_32879 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr6 7594068 7594068 1 + C A SKCM 7594067 + 7594047 7594087 41 ATTGAGGAAAATGGGCTATACCAAAGAAGAAGAGGTACCAT ATTGAGGAAAATGGGCTATACAAAAGAAGAAGAGGTACCAT < 41bp 1 0.718384417637991 1 0.427308738231659 experiment 0.563231164724018 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7594067 chr6:7594068 synonymous SNV . 0 22 hm5C_associated_SNPs_32882 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7594027-7594080
64251 chr1 46827414 46827414 1 + A T SKCM 46827413 + 46827393 46827433 41 TTCCGAAGGGTTTTCATGGACACATTTTGTTTCTTCTCATC TTCCGAAGGGTTTTCATGGACTCATTTTGTTTCTTCTCATC < 41bp 1 0.409449106448993 1 0.0588441491127014 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46827413 chr1:46827414 nonsynonymous SNV 0.988 3 22 hm5C_associated_SNPs_32883 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46827384-46827453
64251 chr22 38028055 38028055 1 + C T SKCM 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TTCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG < 41bp 1 0.399991207083228 1 0.0772422850131989 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028055 synonymous SNV . 0 2 hm5C_associated_SNPs_32884 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:38028045-38028066
64251 chr19 10940894 10940894 1 + C T SKCM 10940900 + 10940880 10940920 41 GGCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCC GGCCCCCCCTGATTTCTGTTCCCGTGGGGGCAGCAGCCTCC < 41bp 1 0.392927656776533 1 0.23285299539566 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940900 chr19:10940894 nonsynonymous SNV 0.826 4 15 hm5C_associated_SNPs_32887 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr19 10940894 10940894 1 + C T SKCM 10940901 + 10940881 10940921 41 GCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCCT GCCCCCCCTGATTTCTGTTCCCGTGGGGGCAGCAGCCTCCT < 41bp 1 0.284100510054914 1 0.266338586807251 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940901 chr19:10940894 nonsynonymous SNV 0.826 4 14 hm5C_associated_SNPs_32888 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr16 77232127 77232127 1 + T C SKCM 77232113 + 77232093 77232133 41 GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGTTACCCA GGGTGAAGAAAGAGGAGGACCGGCTCTTCATTCGCTACCCA < 41bp 1 0.551184372939545 1 0.171361237764359 experiment 0.89763125412091 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MON1B ENSG00000103111 CDS Human protein_coding chr16:77232113 chr16:77232127 synonymous SNV . 0 35 hm5C_associated_SNPs_32889 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:77232115-77232172
64251 chr7 99621867 99621867 1 + C T SKCM 99621875 + 99621855 99621895 41 TTTGACCTTCATCACGAGGCCACCCAGTCCCACTTCAAACA TTTGACCTTCATTACGAGGCCACCCAGTCCCACTTCAAACA < 41bp 1 0.251433194835891 1 0.050258070230484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99621875 chr7:99621867 nonsynonymous SNV 0.994 0 13 hm5C_associated_SNPs_32890 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:99621854-99621870
64251 chr17 47119686 47119686 1 + G A SKCM 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCGAGAATTGTTGCAGGGCCGAGCAGAAAATAATGAAGA < 41bp 1 0.127981821794614 1 0.242724657058716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119686 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_32891 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47119657-47119725
64251 chr17 47119686 47119686 1 + G A SKCM 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCGAGAATTGTTGCAGGGCCGAGCAGAAAATAATGAAGAA < 41bp 1 0.318954943911688 1 0.383515655994415 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119686 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_32892 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47119657-47119725
64251 chr19 35749931 35749931 1 + G A SKCM 35749925 + 35749905 35749945 41 CCGTGGTCTCAGCCCAGGACCTCCAGGGGAACAATGAGGCC CCGTGGTCTCAGCCCAGGACCTCCAGAGGAACAATGAGGCC < 41bp 1 0.770687029102254 1 0.857820391654968 experiment 0.458625941795492 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35749925 chr19:35749931 nonsynonymous SNV 0.982 5 27 hm5C_associated_SNPs_32893 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:35749897-35749933
64251 chr9 132618591 132618591 1 + C T SKCM 132618609 + 132618589 132618629 41 ACCTGTCAGTCGTGTGGGGTCACCGGACCAAACCTATGGGC ACTTGTCAGTCGTGTGGGGTCACCGGACCAAACCTATGGGC < 41bp 1 0.683444331949353 1 0.448285698890686 experiment 0.633111336101294 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132618609 chr9:132618591 synonymous SNV . 0 3 hm5C_associated_SNPs_32894 0 0 1 GPKOW POSTAR2 ENCODE chr9:132618550-132618602
64251 chr6 7572147 7572147 1 + G A SKCM 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAAAGAAAATGACAAGCAAGAAACATGGATGCTGATG < 41bp 1 0.533182151009719 1 0.812922239303589 experiment 0.933635697980562 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572147 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_32897 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:7572121-7572157
64251 chr6 36106539 36106539 1 + C T SKCM 36106530 + 36106510 36106550 41 CCCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGCCAGC CCCCCAGGAAGGATTTCACTCAGCTGTTCTCACGGGCCAGC < 41bp 1 0.78207997908807 1 0.574314594268799 experiment 0.43584004182386 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAPK13 ENSG00000156711 CDS Human protein_coding chr6:36106530 chr6:36106539 nonsynonymous SNV 0.758 1 30 hm5C_associated_SNPs_32898 0 0 4 BUD13 POSTAR2 ENCODE chr6:36106472-36106560
64251 chr11 14865471 14865471 1 + C T SKCM 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TTCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA < 41bp 1 0.407592997519868 1 0.815944075584412 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865471 nonsynonymous SNV 0.978 3 2 hm5C_associated_SNPs_32899 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:14865463-14865488
64251 chr3 50005945 50005945 1 + C T SKCM 50005946 + 50005926 50005966 41 CTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGT CTTTCAGAACAGCCAAAGTTCAGTTCAAGACCAAGATAAGT < 41bp 1 0.109558600356433 1 0.122590065002441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005946 chr3:50005945 nonsynonymous SNV 0.993 0 20 hm5C_associated_SNPs_32900 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50005759-50005956
64251 chr14 102901109 102901109 1 + C T SKCM 102901100 + 102901080 102901120 41 CCCCCTCCTGAACTCACTCACTGTGCCTTCCAGCCTCAGCT CCCCCTCCTGAACTCACTCACTGTGCCTTTCAGCCTCAGCT < 41bp 1 0.124023185415159 1 0.120214104652405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102901100 chr14:102901109 nonsynonymous SNV 0.982 1 30 hm5C_associated_SNPs_32901 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102901098-102901118
64251 chr1 114516050 114516050 1 + C T SKCM 114516043 + 114516023 114516063 41 GTACCAACACCAGTTTGCCACCCAATCCTACATTGGGTCTT GTACCAACACCAGTTTGCCACCCAATCTTACATTGGGTCTT < 41bp 1 0.315288027224684 1 0.15078192949295 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114516043 chr1:114516050 synonymous SNV . 0 28 hm5C_associated_SNPs_32904 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:114516039-114516055
64251 chr13 26923281 26923281 1 + G C SKCM 26923264 + 26923244 26923284 41 TCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGT TCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGCTGT < 41bp 1 0.490142575132061 1 0.325766116380692 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26923264 chr13:26923281 nonsynonymous SNV 0.892 2 38 hm5C_associated_SNPs_32905 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr13:26923249-26923283
64251 chr2 47221588 47221588 1 + G A SKCM 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC CATAGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC < 41bp 1 0.0744411433564257 1 0.0338680446147919 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221588 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_32906 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chrX 150156315 150156315 1 + G A SKCM 150156311 + 150156291 150156331 41 AAAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG AAAGGGTCCTGCTAAAGTTGCCCGAAAAAAGGTGGAAGAGG < 41bp 1 0.623694986772869 1 0.17807924747467 experiment 0.752610026454261 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156311 chrX:150156315 synonymous SNV . 0 25 hm5C_associated_SNPs_32907 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156315 150156315 1 + G A SKCM 150156312 + 150156292 150156332 41 AAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA AAGGGTCCTGCTAAAGTTGCCCGAAAAAAGGTGGAAGAGGA < 41bp 1 0.426515736863068 1 0.532367885112762 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156312 chrX:150156315 synonymous SNV . 0 24 hm5C_associated_SNPs_32908 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156315 150156315 1 + G A SKCM 150156313 + 150156293 150156333 41 AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA AGGGTCCTGCTAAAGTTGCCCGAAAAAAGGTGGAAGAGGAA < 41bp 1 0.555510741713842 1 0.558401465415955 experiment 0.888978516572317 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156313 chrX:150156315 synonymous SNV . 0 23 hm5C_associated_SNPs_32909 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chr8 26505250 26505250 1 + C T SKCM 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCCGCATTGCTGTGGGATCTGATGCCGACCTGGTCATCT < 41bp 1 0.377909611309804 1 0.0956980586051941 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505250 synonymous SNV . 0 22 hm5C_associated_SNPs_32910 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505227-26505251
64251 chr7 150034718 150034718 1 + C T SKCM 150034708 + 150034688 150034728 41 GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT GGTACTCAGCTCTGCGGGCCCCACCTCTTCTTTCGTCTTCT < 41bp 1 0.188772074047961 1 0.0686376392841339 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034708 chr7:150034718 synonymous SNV . 0 31 hm5C_associated_SNPs_32911 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150034689-150034721
64251 chr10 5147811 5147811 1 + G A SKCM 5147798 + 5147778 5147818 41 TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGAGGACAT TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAAAGGACAT < 41bp 1 0.165336033963827 1 0.141538679599762 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5147798 chr10:5147811 nonsynonymous SNV 0.523 2 34 hm5C_associated_SNPs_32912 0 0 1 RPS3 POSTAR2 ENCODE chr10:5147789-5147850
64251 chr13 24242875 24242875 1 + C T SKCM 24242887 + 24242867 24242907 41 CTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAG CTTCGGATTCCTCACGCAGTCCATCTGTGGCGAGTTTTCAG < 41bp 1 0.119351776901287 1 0.0899239182472229 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242887 chr13:24242875 nonsynonymous SNV 0.023 4 9 hm5C_associated_SNPs_32913 0 0 2 SND1 POSTAR2 ENCODE chr13:24242829-24242898
64251 chr20 62374338 62374338 1 + G A SKCM 62374321 + 62374301 62374341 41 AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGAACT < 41bp 1 0.142350207582328 1 0.32578706741333 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374321 chr20:62374338 nonsynonymous SNV 0.958 3 38 hm5C_associated_SNPs_32915 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:62374318-62374357
64251 chr17 55194271 55194271 1 + G A SKCM 55194253 + 55194233 55194273 41 CACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTG CACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAATG < 41bp 1 0.490021497675383 1 0.393924355506897 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194253 chr17:55194271 nonsynonymous SNV 0.922 1 39 hm5C_associated_SNPs_32916 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr19 5667165 5667165 1 + C T SKCM 5667169 + 5667149 5667189 41 GGGCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACA GGGCCGGGGGCTGCCTTCTCCCCCCAGGTTTGTGTCCCACA < 41bp 1 0.266537956985277 1 0.246707260608673 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667169 chr19:5667165 nonsynonymous SNV 0.998 2 17 hm5C_associated_SNPs_32917 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667165 5667165 1 + C T SKCM 5667171 + 5667151 5667191 41 GCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACC GCCGGGGGCTGCCTTCTCCCCCCAGGTTTGTGTCCCACACC < 41bp 1 0.537443924250458 1 0.318094551563263 experiment 0.925112151499084 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667171 chr19:5667165 nonsynonymous SNV 0.998 2 15 hm5C_associated_SNPs_32918 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667165 5667165 1 + C T SKCM 5667172 + 5667152 5667192 41 CCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCC CCGGGGGCTGCCTTCTCCCCCCAGGTTTGTGTCCCACACCC < 41bp 1 0.641107142722661 1 0.509437203407288 experiment 0.717785714554679 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667172 chr19:5667165 nonsynonymous SNV 0.998 2 14 hm5C_associated_SNPs_32919 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667165 5667165 1 + C T SKCM 5667173 + 5667153 5667193 41 CGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCCG CGGGGGCTGCCTTCTCCCCCCAGGTTTGTGTCCCACACCCG < 41bp 1 0.697696260586262 1 0.616830348968506 experiment 0.604607478827475 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667173 chr19:5667165 nonsynonymous SNV 0.998 2 13 hm5C_associated_SNPs_32920 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr21 47864701 47864701 1 + G T SKCM 47864706 + 47864686 47864726 41 ATTCACCATTTAGAAGTGATCCAGCAAAGATTGGGAGGGGT ATTCACCATTTAGAATTGATCCAGCAAAGATTGGGAGGGGT < 41bp 1 0.046869236458306 1 0.400844067335129 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47864706 chr21:47864701 nonsynonymous SNV 0.457 0 16 hm5C_associated_SNPs_32921 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:47864689-47864705
64251 chr12 6618900 6618900 1 + C T SKCM 6618914 + 6618894 6618934 41 GCCTTTCGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT GCCTTTTGAGCTCAGGGGCCCCTGGCTATGCTGCAGCACTT < 41bp 1 0.120623796889369 1 0.124195516109467 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618914 chr12:6618900 stopgain 0.995 1 7 hm5C_associated_SNPs_32923 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:6618878-6618914
64251 chr10 17277874 17277874 1 + C T SKCM 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTTCCTG < 41bp 1 0.0623112591989138 1 0.489414632320404 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277874 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_32924 0 0 25 PTBP1 POSTAR2 GSE57278,GSM1378377 chr10:17277840-17277880
64251 chr22 23438371 23438371 1 + C T SKCM 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGCGCATTGCCGCAGCTGACTAT < 41bp 1 0.263004096542511 1 0.0590869188308716 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438371 synonymous SNV . 0 26 hm5C_associated_SNPs_32925 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr10 17271885 17271885 1 + G A SKCM 17271865 + 17271845 17271885 41 GGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCG GGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCA < 41bp 1 0.0577990106069 1 0.13743394613266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271865 chr10:17271885 nonsynonymous SNV 1.000 5 41 hm5C_associated_SNPs_32926 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271880-17271900
64251 chr10 17271885 17271885 1 + G A SKCM 17271866 + 17271846 17271886 41 GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGG GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCAG < 41bp 1 0.719294012929773 1 0.339859485626221 experiment 0.561411974140454 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271866 chr10:17271885 nonsynonymous SNV 1.000 5 40 hm5C_associated_SNPs_32927 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271880-17271900
64251 chr10 17271886 17271886 1 + G A SKCM 17271866 + 17271846 17271886 41 GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGG GCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCGA < 41bp 1 0.707447373532054 1 0.363463640213013 experiment 0.585105252935892 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271866 chr10:17271886 synonymous SNV . 0 41 hm5C_associated_SNPs_32928 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271880-17271900
64251 chr1 161199489 161199489 1 + C T SKCM 161199507 + 161199487 161199527 41 GGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTT GGTTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTT < 41bp 1 0.0537274586426028 1 0.058824896812439 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199507 chr1:161199489 nonsynonymous SNV 0.028 2 3 hm5C_associated_SNPs_32929 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:161199467-161199497
64251 chr10 135233559 135233559 1 + C T SKCM 135233540 + 135233520 135233560 41 CGTCCCCCAGGTAACGTGAACATTATTCAGCCTAACTATCC CGTCCCCCAGGTAACGTGAACATTATTCAGCCTAACTATTC < 41bp 1 0.200495320583192 1 0.00833305716514587 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135233540 chr10:135233559 nonsynonymous SNV 0.000 0 40 hm5C_associated_SNPs_32930 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:135233556-135233580
64251 chr17 46940288 46940288 1 + A G SKCM 46940294 + 46940274 46940314 41 GCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCC GCCCCTTTGTTTCAGTTGTCCAATTTGTGACAAGATCTTCC < 41bp 1 0.130819593203424 1 0.247120499610901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46940294 chr17:46940288 nonsynonymous SNV 0.848 0 15 hm5C_associated_SNPs_32931 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46940250-46940288
64251 chr11 62554746 62554746 1 + A G SKCM 62554734 + 62554714 62554754 41 CCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGT CCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTGCTCGCTGT < 41bp 1 0.218116221755586 1 0.0765882730484009 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554734 chr11:62554746 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_32932 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:62554716-62554752
64251 chr11 62554746 62554746 1 + A G SKCM 62554736 + 62554716 62554756 41 GCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGTAC GCCCCGCCCGCCGGTGGGCGCTCTCGGACTGCTCGCTGTAC < 41bp 1 0.187638035055417 1 0.10699987411499 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554736 chr11:62554746 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_32933 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:62554716-62554752
64251 chr15 90771687 90771687 1 + G A SKCM 90771692 + 90771672 90771712 41 CCACTCAACGGCCTAGGGCCCCCTAGCACCCCGCTCGATCA CCACTCAACGGCCTAAGGCCCCCTAGCACCCCGCTCGATCA < 41bp 1 0.239480092708531 1 0.132070332765579 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771692 chr15:90771687 nonsynonymous SNV 0.100 0 16 hm5C_associated_SNPs_32934 0 0 1 RPS3 POSTAR2 ENCODE chr15:90771632-90771689
64251 chr16 30664151 30664151 1 + C G SKCM 30664142 + 30664122 30664162 41 TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA TGCCTCGCCACCCCGGCAGGCCGGGTGGTGCTCGCAGGCCA < 41bp 1 0.709427119235254 1 0.632065057754517 experiment 0.581145761529492 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664142 chr16:30664151 nonsynonymous SNV 0.242 0 30 hm5C_associated_SNPs_32945 0 0 2 PPIG POSTAR2 ENCODE chr16:30664094-30664159
64251 chrX 147022103 147022103 1 + A G SKCM 147022104 + 147022084 147022124 41 TTCTTTTTCAGGGTATGGTACCATTTGTTTTTGTGGGAACA TTCTTTTTCAGGGTATGGTGCCATTTGTTTTTGTGGGAACA < 41bp 1 0.0408652713110458 1 0.0816825032234192 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FMR1 ENSG00000102081 CDS Human protein_coding chrX:147022104 chrX:147022103 synonymous SNV . 0 20 hm5C_associated_SNPs_32948 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147022080-147022160
64251 chr11 65269103 65269103 1 + T C SKCM 65269086 + 65269066 65269106 41 GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTA GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGCGTA < 41bp 1 0.760308793167472 1 0.339613497257233 experiment 0.479382413665056 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269086 chr11:65269103 . . 0 38 hm5C_associated_SNPs_32949 0 0 110 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269103 65269103 1 + T C SKCM 65269107 + 65269087 65269127 41 TGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAA TGGGTTAGAGAAGGAGCGTACCGCTGTGCTGTTGGCACGAA < 41bp 1 0.479006619019069 1 0.190056413412094 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269107 chr11:65269103 . . 0 17 hm5C_associated_SNPs_32950 0 0 110 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269103 65269103 1 + T C SKCM 65269110 + 65269090 65269130 41 GTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACAC GTTAGAGAAGGAGCGTACCGCTGTGCTGTTGGCACGAACAC < 41bp 1 0.522479659342181 1 0.20936593413353 experiment 0.955040681315638 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269110 chr11:65269103 . . 0 14 hm5C_associated_SNPs_32951 0 0 110 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269103 65269103 1 + T C SKCM 65269115 + 65269095 65269135 41 AGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCA AGAAGGAGCGTACCGCTGTGCTGTTGGCACGAACACCTTCA < 41bp 1 0.345294216937071 1 0.116498619318008 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269115 chr11:65269103 . . 0 9 hm5C_associated_SNPs_32952 0 0 110 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr3 196533549 196533549 1 + A G SKCM 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATGCGAA < 41bp 1 0.514939403759917 1 0.754564821720123 experiment 0.970121192480165 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533549 nonsynonymous SNV 0.998 3 37 hm5C_associated_SNPs_32963 0 0 5 LIN28B POSTAR2 ENCODE chr3:196533497-196533553
64251 chr6 37141788 37141788 1 + C T SKCM 37141808 + 37141788 37141828 41 CATGGATGCAAGATGTTCTCCTGCCCCAGGAAACTGCTGAG TATGGATGCAAGATGTTCTCCTGCCCCAGGAAACTGCTGAG < 41bp 1 0.316289126096278 1 0.284970641136169 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIM1 ENSG00000137193 CDS Human protein_coding chr6:37141808 chr6:37141788 nonsynonymous SNV 0.980 3 1 hm5C_associated_SNPs_32964 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:37141774-37141797
64251 chr19 14512300 14512300 1 + C T SKCM 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA TTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.268190440777002 1 0.0456079244613647 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512300 nonsynonymous SNV 0.004 3 1 hm5C_associated_SNPs_32965 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14512279-14512303
64251 chr19 34959991 34959991 1 + T C SKCM 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACGTTCTCATAGTTGATTCAGATGAAGAAGACTCTTCAA < 41bp 1 0.492127335758123 1 0.314709663391113 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959991 synonymous SNV . 0 34 hm5C_associated_SNPs_32968 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr19:34959987-34960008
64251 chr17 57644043 57644043 1 + G A SKCM 57644036 + 57644016 57644056 41 AGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA AGGAACTACTCCAACTTTTCCTATTCAAAAACAAAGAAAAA < 41bp 1 0.0912366310786778 1 0.209234088659286 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX40 ENSG00000108406 CDS Human protein_coding chr17:57644036 chr17:57644043 synonymous SNV . 0 28 hm5C_associated_SNPs_32969 0 0 13 EWSR1 POSTAR2 SRX029343 chr17:57644018-57644043
64251 chr2 232035369 232035369 1 + C T SKCM 232035362 + 232035342 232035382 41 ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAAC ACCTGTGGCAGCACATGGCCCAAAAATTGAGGAGGAGGAAC < 41bp 1 0.607097675975384 1 0.143536269664764 experiment 0.785804648049232 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232035362 chr2:232035369 synonymous SNV . 0 28 hm5C_associated_SNPs_32970 0 0 4 GRWD1 POSTAR2 ENCODE chr2:232035297-232035372
64251 chr16 309980 309980 1 + C T SKCM 309995 + 309975 310015 41 CTCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG CTCTCTCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG < 41bp 1 0.585433238664908 1 0.0461578071117401 experiment 0.829133522670184 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:309995 chr16:309980 nonsynonymous SNV 0.014 2 6 hm5C_associated_SNPs_32973 0 0 3 DDX55 POSTAR2 ENCODE chr16:309979-310039
64251 chr10 17278313 17278313 1 + C T SKCM 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCTCTCTGGTTGATACCCACTCAAAA < 41bp 1 0.374906283925765 1 0.712915420532227 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278313 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_32975 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr2 32800289 32800289 1 + C T SKCM 32800281 + 32800261 32800301 41 CTGCTGGAATTGCTTCGGGCCATTGCTTCTTGTGCTGCCAT CTGCTGGAATTGCTTCGGGCCATTGCTTTTTGTGCTGCCAT < 41bp 1 0.0360203149012819 1 0.11701101064682 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32800281 chr2:32800289 nonsynonymous SNV 0.990 2 29 hm5C_associated_SNPs_32976 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:32800280-32800300
64251 chr5 176721888 176721888 1 + G A SKCM 176721903 + 176721883 176721923 41 AGAAAGGCTGTGTGTCAGATCCTCTTCAGACATCTGGGAAA AGAAAAGCTGTGTGTCAGATCCTCTTCAGACATCTGGGAAA < 41bp 1 0.05065778805751 1 0.0527101457118988 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721903 chr5:176721888 nonsynonymous SNV 0.003 1 6 hm5C_associated_SNPs_32977 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176721882-176721917
64251 chr12 93968784 93968784 1 + C T SKCM 93968798 + 93968778 93968818 41 AGAAGCCCCCCGGAACGGCACTGTTCACCTTTATCTGACCA AGAAGCTCCCCGGAACGGCACTGTTCACCTTTATCTGACCA < 41bp 1 0.251187199426582 1 0.0505889058113098 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968798 chr12:93968784 synonymous SNV . 0 7 hm5C_associated_SNPs_32978 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:93968780-93968800
64251 chr6 34823398 34823398 1 + C T SKCM 34823411 + 34823391 34823431 41 TAGGTGTCTCTGCCAACAGACTCATGGGTGGTGCCATGCAG TAGGTGTTTCTGCCAACAGACTCATGGGTGGTGCCATGCAG < 41bp 1 0.20872750146139 1 0.239050000905991 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34823411 chr6:34823398 synonymous SNV . 0 8 hm5C_associated_SNPs_32979 0 0 2 BUD13 POSTAR2 ENCODE chr6:34823395-34823459
64251 chr9 4585528 4585528 1 + C T SKCM 4585509 + 4585489 4585529 41 TTATGTCAATGGAGGCTTTGCAGTAGACAAGTCTGACACCA TTATGTCAATGGAGGCTTTGCAGTAGACAAGTCTGACACTA < 41bp 1 0.728284528927635 1 0.779664754867554 experiment 0.54343094214473 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585509 chr9:4585528 synonymous SNV . 0 40 hm5C_associated_SNPs_32980 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:4585511-4585542
64251 chr1 27088718 27088718 1 + C T SKCM 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCCGCGTCAGCTTTCCGGAGGACAGATA < 41bp 1 0.303353761279462 1 0.190733850002289 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088718 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_32982 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:27088700-27088720
64251 chr6 7581101 7581101 1 + C T SKCM 7581082 + 7581062 7581102 41 CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCCA CAGGAGAGGACTGTGAAGGACCAGGATATCACGCGGTTCTA < 41bp 1 0.361133608068293 1 0.256294369697571 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581082 chr6:7581101 stopgain 0.854 1 40 hm5C_associated_SNPs_32983 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581101 7581101 1 + C T SKCM 7581095 + 7581075 7581115 41 TGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGAAA TGAAGGACCAGGATATCACGCGGTTCTAGAACTCTCTGAAA < 41bp 1 0.206508123293873 1 0.260834872722626 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581095 chr6:7581101 stopgain 0.854 1 27 hm5C_associated_SNPs_32984 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581101 7581101 1 + C T SKCM 7581100 + 7581080 7581120 41 GACCAGGATATCACGCGGTTCCAGAACTCTCTGAAAGAGCT GACCAGGATATCACGCGGTTCTAGAACTCTCTGAAAGAGCT < 41bp 1 0.455388065074217 1 0.568095624446869 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581100 chr6:7581101 stopgain 0.854 1 22 hm5C_associated_SNPs_32985 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581101 7581101 1 + C T SKCM 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTCTAGAACTCTCTGAAAGAGCTGCAGCTGCAG < 41bp 1 0.735218061823534 1 0.768188118934631 experiment 0.529563876352931 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581101 stopgain 0.854 1 12 hm5C_associated_SNPs_32986 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr6 7581101 7581101 1 + C T SKCM 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TCTAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG < 41bp 1 0.757939431797055 1 0.392389595508575 experiment 0.48412113640589 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581101 stopgain 0.854 1 3 hm5C_associated_SNPs_32987 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr18 60384439 60384439 1 + T G SKCM 60384441 + 60384421 60384461 41 TTGGGGAGCTGTGGAGGGTGCAGGAGGAAGGCATGGACTCG TTGGGGAGCTGTGGAGGGGGCAGGAGGAAGGCATGGACTCG < 41bp 1 0.766434138407091 1 0.869127988815308 experiment 0.467131723185818 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60384441 chr18:60384439 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_32988 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr18:60384407-60384447
64251 chr19 54377065 54377065 1 + C T SKCM 54377053 + 54377033 54377073 41 ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTTCCCCTGTC < 41bp 1 0.680622234545108 1 0.881418228149414 experiment 0.638755530909785 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377053 chr19:54377065 synonymous SNV . 0 33 hm5C_associated_SNPs_32989 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486178 chr19:54377060-54377080
64251 chr12 93968785 93968785 1 + C T SKCM 93968798 + 93968778 93968818 41 AGAAGCCCCCCGGAACGGCACTGTTCACCTTTATCTGACCA AGAAGCCTCCCGGAACGGCACTGTTCACCTTTATCTGACCA < 41bp 1 0.292039448214624 1 0.0718801915645599 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968798 chr12:93968785 nonsynonymous SNV 0.979 1 8 hm5C_associated_SNPs_32991 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:93968780-93968800
64251 chr19 47884494 47884494 1 + C A SKCM 47884481 + 47884461 47884501 41 AGCGACTGTCTCCGAACCTTCTGGACCTGCCCCCACTGTGG AGCGACTGTCTCCGAACCTTCTGGACCTGCCCCAACTGTGG < 41bp 1 0.780319829477246 1 0.801715016365051 experiment 0.439360341045508 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX34 ENSG00000134815 CDS Human protein_coding chr19:47884481 chr19:47884494 nonsynonymous SNV 0.979 1 34 hm5C_associated_SNPs_32992 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:47884494-47884495
64251 chr4 20555447 20555447 1 + C T SKCM 20555440 + 20555420 20555460 41 TTTTCCAGAGCAATTGGAGCCAACCCTCTTTACTGTGATTG TTTTCCAGAGCAATTGGAGCCAACCCTTTTTACTGTGATTG < 41bp 1 0.101895027188219 1 0.156450241804123 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20555440 chr4:20555447 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_32993 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20555433-20555475
64251 chr6 47576991 47576991 1 + C T SKCM 47576982 + 47576962 47577002 41 AAAAAAATTCCCTGGATGAACTTAGAGCCCAGATTATTGAA AAAAAAATTCCCTGGATGAACTTAGAGCCTAGATTATTGAA < 41bp 1 0.195338097860517 1 0.0927630662918091 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576982 chr6:47576991 stopgain 1.000 0 30 hm5C_associated_SNPs_32994 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr2 204143314 204143314 1 + C T SKCM 204143304 + 204143284 204143324 41 TTTTTCTCTAAGCCCTCATGCAACTGGAGTCTGTTTTAAGG TTTTTCTCTAAGCCCTCATGCAACTGGAGTTTGTTTTAAGG < 41bp 1 0.0961598394818742 1 0.693093657493591 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204143304 chr2:204143314 nonsynonymous SNV 0.995 1 31 hm5C_associated_SNPs_32995 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:204143300-204143327
64251 chr14 103390068 103390068 1 + A G SKCM 103390064 + 103390044 103390084 41 CCAGCACTGACCCAGGCGGTCTCCAAACTCTGGGTCCCCAA CCAGCACTGACCCAGGCGGTCTCCGAACTCTGGGTCCCCAA < 41bp 1 0.618678145069036 1 0.235884219408035 experiment 0.762643709861929 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control AMN ENSG00000166126 CDS Human protein_coding chr14:103390064 chr14:103390068 nonsynonymous SNV 0.937 4 25 hm5C_associated_SNPs_32996 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr14:103390052-103390075
64251 chr5 82868277 82868277 1 + T A SKCM 82868273 + 82868253 82868293 41 CCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG CCCAACCAGCCAGACAGCTTCTTTACTGCTGGAGAAGACTG < 41bp 1 0.105218924227343 1 0.116587817668915 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868273 chr5:82868277 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_32997 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868274-82868316
64251 chr5 82868277 82868277 1 + T A SKCM 82868278 + 82868258 82868298 41 CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG CCAGCCAGACAGCTTCTTTACTGCTGGAGAAGACTGTGTTG < 41bp 1 0.465445533714019 1 0.314036309719086 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868278 chr5:82868277 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_32998 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868274-82868316
64251 chr19 1055315 1055315 1 + C T SKCM 1055304 + 1055284 1055324 41 AGAACCTGACAGGCCGGAACCTGTCTGACTTCCTGGTCAAG AGAACCTGACAGGCCGGAACCTGTCTGACTTTCTGGTCAAG < 41bp 1 0.129381856089368 1 0.118060499429703 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1055304 chr19:1055315 synonymous SNV . 0 32 hm5C_associated_SNPs_32999 0 0 7 BUD13 POSTAR2 ENCODE chr19:1055312-1055352
64251 chr10 102114298 102114298 1 + C T SKCM 102114310 + 102114290 102114330 41 GTTGGCTGCTTGTGCGCAAACACCCAGCTGTCAAAGAGAAG GTTGGCTGTTTGTGCGCAAACACCCAGCTGTCAAAGAGAAG < 41bp 1 0.465619561837344 1 0.0448154807090759 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102114310 chr10:102114298 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_33001 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:102114220-102114300
64251 chr3 123348364 123348364 1 + C T SKCM 123348379 + 123348359 123348399 41 GGCATCGTCGGAGATCTCATCGAATGCCTCGTCGTCGAAGT GGCATTGTCGGAGATCTCATCGAATGCCTCGTCGTCGAAGT < 41bp 1 0.563578977501968 1 0.361248314380646 experiment 0.872842044996063 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYLK ENSG00000065534 CDS Human protein_coding chr3:123348379 chr3:123348364 nonsynonymous SNV 0.991 1 6 hm5C_associated_SNPs_33005 0 0 2 HNRNPD POSTAR2 GSE52971,GSM1279664 chr3:123348334-123348375
64251 chr1 249212359 249212359 1 + G A SKCM 249212364 + 249212344 249212384 41 GCCTGTGTGTATCTGGAGAGCAATGCTGACACAACATCTCA GCCTGTGTGTATCTGAAGAGCAATGCTGACACAACATCTCA < 41bp 1 0.418081903133997 1 0.0801030993461609 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212364 chr1:249212359 nonsynonymous SNV 0.812 2 16 hm5C_associated_SNPs_33006 0 0 1 RBM15 POSTAR2 ENCODE chr1:249212328-249212363
64251 chr10 17277175 17277175 1 + C T SKCM 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTTCCTGGAACGCCAGATGCGTGA < 41bp 1 0.175478583835548 1 0.220364958047867 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277175 nonsynonymous SNV 0.984 5 20 hm5C_associated_SNPs_33007 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277175 17277175 1 + C T SKCM 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTTCCTGGAACGCCAGATGCGTGAAATGGAAGA < 41bp 1 0.42281443124748 1 0.506452322006226 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277175 nonsynonymous SNV 0.984 5 11 hm5C_associated_SNPs_33008 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 17277175 17277175 1 + C T SKCM 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTTCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT < 41bp 1 0.623278376205259 1 0.34809610247612 experiment 0.753443247589481 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277175 nonsynonymous SNV 0.984 5 4 hm5C_associated_SNPs_33009 0 0 18 UPF1 POSTAR2 GSE69586,GSM1704216 chr10:17277160-17277180
64251 chr10 103901199 103901199 1 + C T SKCM 103901206 + 103901186 103901226 41 GTTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGG GTTCCACATGTACTTATGGGCCCTTGGGATGGGGCCCAGGG < 41bp 1 0.0746088736955248 1 0.032678484916687 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901206 chr10:103901199 synonymous SNV . 0 14 hm5C_associated_SNPs_33010 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:103901160-103901200
64251 chr10 103901199 103901199 1 + C T SKCM 103901207 + 103901187 103901227 41 TTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGC TTCCACATGTACTTATGGGCCCTTGGGATGGGGCCCAGGGC < 41bp 1 0.0523586017208218 1 0.0732603073120117 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901207 chr10:103901199 synonymous SNV . 0 13 hm5C_associated_SNPs_33011 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:103901160-103901200
64251 chr10 103901199 103901199 1 + C T SKCM 103901208 + 103901188 103901228 41 TCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGCC TCCACATGTACTTATGGGCCCTTGGGATGGGGCCCAGGGCC < 41bp 1 0.376858244792231 1 0.377097636461258 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901208 chr10:103901199 synonymous SNV . 0 12 hm5C_associated_SNPs_33012 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:103901160-103901200
64251 chr19 12924222 12924222 1 + C T SKCM 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCTCCGTTCTT < 41bp 1 0.338337996210214 1 0.0867345333099365 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924222 nonsynonymous SNV 0.000 1 33 hm5C_associated_SNPs_33013 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924222 12924222 1 + C T SKCM 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCCCGTCTCCGTTCTTC < 41bp 1 0.118331636456806 1 0.0571168065071106 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924222 nonsynonymous SNV 0.000 1 32 hm5C_associated_SNPs_33014 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924222 12924222 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCTCCGTTCTTCCCACCGATATTTCCTGGAACG < 41bp 1 0.156925525786646 1 0.0685359835624695 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924222 nonsynonymous SNV 0.000 1 11 hm5C_associated_SNPs_33015 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr5 176522676 176522676 1 + C T SKCM 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCTT < 41bp 1 0.0526767796823401 1 0.219229847192764 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522676 synonymous SNV . 0 40 hm5C_associated_SNPs_33016 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr17 33310197 33310197 1 + C T SKCM 33310210 + 33310190 33310230 41 GTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCAC GTTCTATTATTCCAGGGAAGCCATCTAAGATCACGTGCCAC < 41bp 1 0.0485913912044388 1 0.18621900677681 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310210 chr17:33310197 nonsynonymous SNV 0.063 0 8 hm5C_associated_SNPs_33017 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:33310190-33310218
64251 chr19 12924223 12924223 1 + C T SKCM 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCTCGTTCTT < 41bp 1 0.315524612606752 1 0.0429238080978394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924223 synonymous SNV . 0 34 hm5C_associated_SNPs_33019 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924223 12924223 1 + C T SKCM 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCTCGTTCTTC < 41bp 1 0.105139591269371 1 0.0451509356498718 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924223 synonymous SNV . 0 33 hm5C_associated_SNPs_33020 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924223 12924223 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCCTCGTTCTTCCCACCGATATTTCCTGGAACG < 41bp 1 0.136967049713126 1 0.0628723502159119 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924223 synonymous SNV . 0 12 hm5C_associated_SNPs_33021 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr17 7476166 7476166 1 + G A SKCM 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA ATGTCTACGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA < 41bp 1 0.37393210978976 1 0.0886116027832031 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476166 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_33022 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr17 7476166 7476166 1 + G A SKCM 7476181 + 7476161 7476201 41 TGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA TGTCTACGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA < 41bp 1 0.698417972731271 1 0.632169604301453 experiment 0.603164054537458 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476181 chr17:7476166 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_33023 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr7 22896303 22896303 1 + C T SKCM 22896296 + 22896276 22896316 41 GTGATGGATTAAAGGATTTACCTGAGGCCAAATTGGTATGC GTGATGGATTAAAGGATTTACCTGAGGTCAAATTGGTATGC < 41bp 1 0.544606905830431 1 0.0799378156661987 experiment 0.910786188339138 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896296 chr7:22896303 . . 0 28 hm5C_associated_SNPs_33024 0 0 33 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr5 179150759 179150759 1 + C T SKCM 179150760 + 179150740 179150780 41 TTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCTGGAAAG TTCCTGTGTTCCTGGTTATTCTCTTCTGCTGTTCTGGAAAG < 41bp 1 0.331168264305379 1 0.248176991939545 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150760 chr5:179150759 synonymous SNV . 0 20 hm5C_associated_SNPs_33025 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:179150658-179150763
64251 chr17 64783058 64783058 1 + C T SKCM 64783073 + 64783053 64783093 41 AAAATCCTTGTCCAAGGAGGCTGTTTCTGTCTGCAAAGGAG AAAATTCTTGTCCAAGGAGGCTGTTTCTGTCTGCAAAGGAG < 41bp 1 0.0443267099011385 1 0.225540578365326 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64783073 chr17:64783058 nonsynonymous SNV 0.953 1 6 hm5C_associated_SNPs_33030 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:64783035-64783062
64251 chr1 155279906 155279906 1 + C T SKCM 155279915 + 155279895 155279935 41 AAGCAGGATTTCGTTCAGCACTTCTCCCAGATCGTTAGGGT AAGCAGGATTTTGTTCAGCACTTCTCCCAGATCGTTAGGGT < 41bp 1 0.121607527431422 1 0.086618036031723 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279915 chr1:155279906 synonymous SNV . 0 12 hm5C_associated_SNPs_33035 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:155279853-155279925
64251 chr6 31912779 31912779 1 + C T SKCM 31912772 + 31912752 31912792 41 GGCAGGAGAATCTGGGGGAGCAGTTTTCCTTGAGCGGAGAT GGCAGGAGAATCTGGGGGAGCAGTTTTTCTTGAGCGGAGAT < 41bp 1 0.158300041911037 1 0.357093632221222 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C2 ENSG00000166278 CDS Human protein_coding chr6:31912772 chr6:31912779 synonymous SNV . 0 28 hm5C_associated_SNPs_33036 0 0 2 PRPF8 POSTAR2 ENCODE chr6:31912762-31912859
64251 chr19 54377066 54377066 1 + C T SKCM 54377053 + 54377033 54377073 41 ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCTCCCTGTC < 41bp 1 0.659838664032573 1 0.861976385116577 experiment 0.680322671934854 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377053 chr19:54377066 nonsynonymous SNV 0.996 3 34 hm5C_associated_SNPs_33037 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486178 chr19:54377060-54377080
64251 chrX 153628232 153628232 1 + C T SKCM 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGCTCCACCCTTTCCACGTCATCCGCAT < 41bp 1 0.175331861611953 1 0.0176310539245605 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628232 synonymous SNV . 0 24 hm5C_associated_SNPs_33038 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chrX 73046700 73046700 1 - C T SKCM 73046689 - 73046669 73046709 41 CTAAGAACTGAGACTTGTGACACAAGGCCAACGACCTAAGA CTAAGAACTAAGACTTGTGACACAAGGCCAACGACCTAAGA < 41bp 1 0.464820898637154 1 0.0910386443138123 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046689 chrX:73046700 . . 0 10 hm5C_associated_SNPs_33039 0 0 92 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046700 73046700 1 - C T SKCM 73046709 - 73046689 73046729 41 GGACAGGACACATGGAAGGCCTAAGAACTGAGACTTGTGAC GGACAGGACACATGGAAGGCCTAAGAACTAAGACTTGTGAC < 41bp 1 0.280734789803574 1 0.410710364580154 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046709 chrX:73046700 . . 0 30 hm5C_associated_SNPs_33040 0 0 92 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr17 29554567 29554567 1 + G A SKCM 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATGAGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA < 41bp 1 0.115624238386339 1 0.0956215560436249 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554567 stopgain 1.000 1 5 hm5C_associated_SNPs_33044 1 0 5 BUD13 POSTAR2 ENCODE chr17:29554498-29554628
64251 chr17 66033503 66033503 1 + T C SKCM 66033483 + 66033463 66033503 41 CTTTTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAAT CTTTTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAAC < 41bp 1 0.168980034827355 1 0.118505507707596 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033483 chr17:66033503 nonsynonymous SNV . 0 41 hm5C_associated_SNPs_33045 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033503 66033503 1 + T C SKCM 66033486 + 66033466 66033506 41 TTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTG TTCTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAACGTG < 41bp 1 0.714275338920691 1 0.23277822136879 experiment 0.571449322158619 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033486 chr17:66033503 nonsynonymous SNV . 0 38 hm5C_associated_SNPs_33046 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033503 66033503 1 + T C SKCM 66033488 + 66033468 66033508 41 CTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAATGTGGA CTCAAGGAAATGAGGCGTCGCAGAATAGAGGTCAACGTGGA < 41bp 1 0.780830010027433 1 0.695401072502136 experiment 0.438339979945133 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033488 chr17:66033503 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_33047 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033503 66033503 1 + T C SKCM 66033510 + 66033490 66033530 41 GAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGAT GAATAGAGGTCAACGTGGAGCTGAGGAAAGCTAAGAAGGAT < 41bp 1 0.626551969108269 1 0.419543147087097 experiment 0.746896061783461 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033510 chr17:66033503 nonsynonymous SNV . 0 14 hm5C_associated_SNPs_33048 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr17 66033503 66033503 1 + T C SKCM 66033520 + 66033500 66033540 41 CAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGC CAACGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGC < 41bp 1 0.592798155960296 1 0.205645114183426 experiment 0.814403688079408 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033520 chr17:66033503 nonsynonymous SNV . 0 4 hm5C_associated_SNPs_33049 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:66033473-66033511
64251 chr13 113487183 113487183 1 + G A SKCM 113487177 + 113487157 113487197 41 GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCGG GAACTGCTTTTTTATAGGAGCGCGAGAAGCTGTTTTTCCGG < 41bp 1 0.667879167668804 1 0.619832813739777 experiment 0.664241664662392 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487177 chr13:113487183 nonsynonymous SNV 0.955 1 27 hm5C_associated_SNPs_33050 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:113487173-113487205
64251 chr4 88036097 88036097 1 + C T SKCM 88036091 + 88036071 88036111 41 GCGAAGGACAATGTGGAGGACAGGACCCCTGAGCACTTTGC GCGAAGGACAATGTGGAGGACAGGACTCCTGAGCACTTTGC < 41bp 1 0.765004795475439 1 0.402917742729187 experiment 0.469990409049122 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036091 chr4:88036097 synonymous SNV . 0 27 hm5C_associated_SNPs_33051 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:88036074-88036104
64251 chr17 29554566 29554566 1 + G A SKCM 29554583 + 29554563 29554603 41 AATGGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA AATAGGAACAAGCAACAAAGCTAATCCTTAACTATCCAAAA < 41bp 1 0.113773485298973 1 0.0882815718650818 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29554583 chr17:29554566 stopgain 1.000 1 4 hm5C_associated_SNPs_33062 0 0 5 BUD13 POSTAR2 ENCODE chr17:29554498-29554628
64251 chr1 11718602 11718602 1 + G A SKCM 11718593 + 11718573 11718613 41 CCTCTGCCTGCCCCCAGCACCTGCCTCAAGTCCCAGGTGGT CCTCTGCCTGCCCCCAGCACCTGCCTCAAATCCCAGGTGGT < 41bp 1 0.245527510348091 1 0.111568033695221 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718593 chr1:11718602 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_33066 0 0 9 BUD13 POSTAR2 ENCODE chr1:11718552-11718629
64251 chr14 90429758 90429758 1 + G C SKCM 90429750 + 90429730 90429770 41 GCAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAG GCAGTGATGATGAGCTGCAACCAGAAATCCCGCAGAAGCAG < 41bp 1 0.700340819024788 1 0.348377406597137 experiment 0.599318361950425 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429750 chr14:90429758 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_33067 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr14 90429758 90429758 1 + G C SKCM 90429751 + 90429731 90429771 41 CAGTGATGATGAGCTGCAACCAGAAATGCCGCAGAAGCAGG CAGTGATGATGAGCTGCAACCAGAAATCCCGCAGAAGCAGG < 41bp 1 0.751789780479861 1 0.9031822681427 experiment 0.496420439040278 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429751 chr14:90429758 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_33068 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:90429726-90429758
64251 chr16 1250392 1250392 1 + C T SKCM 1250401 + 1250381 1250421 41 AGCTGCGCATGCCCTGCACCCTGGGCTGGGAGGCCTACACG AGCTGCGCATGTCCTGCACCCTGGGCTGGGAGGCCTACACG < 41bp 1 0.769829879429453 1 0.583229839801788 experiment 0.460340241141093 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1250401 chr16:1250392 nonsynonymous SNV 0.048 1 12 hm5C_associated_SNPs_33069 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:1250352-1250396
64251 chr11 400004 400004 1 + G A SKCM 399996 + 399976 400016 41 GGAACCTTTCATCCAGCGACCACCTGAAGGACCGCCTGGCC GGAACCTTTCATCCAGCGACCACCTGAAAGACCGCCTGGCC < 41bp 1 0.310378449195483 1 0.377758115530014 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PKP3 ENSG00000184363 CDS Human protein_coding chr11:399996 chr11:400004 synonymous SNV . 0 29 hm5C_associated_SNPs_33070 0 0 4 FXR2 POSTAR2 ENCODE chr11:399984-400030
64251 chr11 400005 400005 1 + G A SKCM 399996 + 399976 400016 41 GGAACCTTTCATCCAGCGACCACCTGAAGGACCGCCTGGCC GGAACCTTTCATCCAGCGACCACCTGAAGAACCGCCTGGCC < 41bp 1 0.316413152899457 1 0.293822586536407 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PKP3 ENSG00000184363 CDS Human protein_coding chr11:399996 chr11:400005 nonsynonymous SNV 0.995 0 30 hm5C_associated_SNPs_33071 0 0 4 FXR2 POSTAR2 ENCODE chr11:399984-400030
64251 chr16 1250393 1250393 1 + C T SKCM 1250401 + 1250381 1250421 41 AGCTGCGCATGCCCTGCACCCTGGGCTGGGAGGCCTACACG AGCTGCGCATGCTCTGCACCCTGGGCTGGGAGGCCTACACG < 41bp 1 0.796409403342223 1 0.73128741979599 experiment 0.407181193315553 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1250401 chr16:1250393 nonsynonymous SNV 0.050 1 13 hm5C_associated_SNPs_33072 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:1250352-1250396
64251 chr11 32953892 32953892 1 + C T SKCM 32953900 + 32953880 32953920 41 AGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAG AGTCATCTTTATTCTGTAGCCCAATTGGAGATTCCACTCAG < 41bp 1 0.240664200706758 1 0.161152631044388 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953900 chr11:32953892 nonsynonymous SNV 0.996 3 13 hm5C_associated_SNPs_33073 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr11 32953892 32953892 1 + C T SKCM 32953901 + 32953881 32953921 41 GTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGG GTCATCTTTATTCTGTAGCCCAATTGGAGATTCCACTCAGG < 41bp 1 0.0836376260682505 1 0.134955257177353 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953901 chr11:32953892 nonsynonymous SNV 0.996 3 12 hm5C_associated_SNPs_33074 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr19 806426 806426 1 + T G SKCM 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAACGGCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG < 41bp 1 0.300477303669071 1 0.0288357734680176 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806426 nonsynonymous SNV 0.006 0 6 hm5C_associated_SNPs_33075 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806426 806426 1 + T G SKCM 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGGCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC < 41bp 1 0.402237503311127 1 0.0781495273113251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806426 nonsynonymous SNV 0.006 0 5 hm5C_associated_SNPs_33076 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806426 806426 1 + T G SKCM 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGGCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG < 41bp 1 0.426020327945649 1 0.0342611074447632 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806426 nonsynonymous SNV 0.006 0 4 hm5C_associated_SNPs_33077 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806426 806426 1 + T G SKCM 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGGCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG < 41bp 1 0.466387883835186 1 0.174447983503342 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806426 nonsynonymous SNV 0.006 0 3 hm5C_associated_SNPs_33078 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806426 806426 1 + T G SKCM 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GGCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC < 41bp 1 0.502625418168959 1 0.540522158145905 experiment 0.994749163662082 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806426 nonsynonymous SNV 0.006 0 2 hm5C_associated_SNPs_33079 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806426 806426 1 + T G SKCM 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG GCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG < 41bp 1 0.782233487012028 1 0.449589610099792 experiment 0.435533025975945 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806426 nonsynonymous SNV 0.006 0 1 hm5C_associated_SNPs_33080 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr8 21844783 21844783 1 + C T SKCM 21844767 + 21844747 21844787 41 GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTTTAAG < 41bp 1 0.306077026781466 1 0.524424076080322 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844767 chr8:21844783 nonsynonymous SNV 0.983 4 37 hm5C_associated_SNPs_33081 0 0 1 DDX24 POSTAR2 ENCODE chr8:21844749-21844793
64251 chr19 50721003 50721003 1 + G A SKCM 50721013 + 50720993 50721033 41 CAGTGACCGAGGGGGCCTATCGGAGCATGCTGCAGGGTGAG CAGTGACCGAAGGGGCCTATCGGAGCATGCTGCAGGGTGAG < 41bp 1 0.669816769800128 1 0.86321747303009 experiment 0.660366460399745 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50721013 chr19:50721003 synonymous SNV . 0 11 hm5C_associated_SNPs_33082 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50720995-50721014
64251 chr14 103802236 103802236 1 + C T SKCM 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCGCAGCGTGTCAGACCAGTTTTATCGCTACAAGATG < 41bp 1 0.239708010213624 1 0.0532376170158386 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802236 synonymous SNV . 0 26 hm5C_associated_SNPs_33083 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr1 9324120 9324120 1 + C T SKCM 9324137 + 9324117 9324157 41 TTTCCCAGCAGCAGCCGGAGCAGCTGGTGCCAGGGCCAGGG TTTTCCAGCAGCAGCCGGAGCAGCTGGTGCCAGGGCCAGGG < 41bp 1 0.457431282286211 1 0.339152157306671 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control H6PD ENSG00000049239 CDS Human protein_coding chr1:9324137 chr1:9324120 nonsynonymous SNV 0.958 2 4 hm5C_associated_SNPs_33084 0 0 1 METAP2 POSTAR2 ENCODE chr1:9324113-9324161
64251 chr14 60591538 60591538 1 + C T SKCM 60591543 + 60591523 60591563 41 AGTTCTATTAGGATACCCTGCTGTTGACAAAGGAAAACAAG AGTTCTATTAGGATATCCTGCTGTTGACAAAGGAAAACAAG < 41bp 1 0.200252030159915 1 0.23190501332283 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591543 chr14:60591538 synonymous SNV . 0 16 hm5C_associated_SNPs_33085 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:60591507-60591545
64251 chr10 114711274 114711274 1 + G A SKCM 114711291 + 114711271 114711311 41 AAGGGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC AAGAGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC < 41bp 1 0.361894002450433 1 0.043953537940979 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114711291 chr10:114711274 nonsynonymous SNV 0.979 4 4 hm5C_associated_SNPs_33086 0 0 2 GRWD1 POSTAR2 ENCODE chr10:114711253-114711286
64251 chr19 41135393 41135393 1 + C T SKCM 41135396 + 41135376 41135416 41 CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC CCTTCCGCTGCATCTGCTGCCCGGGATTCGCACCCACGCAC < 41bp 1 0.651803156739852 1 0.874475002288818 experiment 0.696393686520296 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135396 chr19:41135393 nonsynonymous SNV 0.040 1 18 hm5C_associated_SNPs_33087 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41135363-41135406
64251 chr6 36566687 36566687 1 + C T SKCM 36566703 + 36566683 36566723 41 AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG AAATTGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG < 41bp 1 0.744806503004224 1 0.25057515501976 experiment 0.510386993991551 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566703 chr6:36566687 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_33088 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:36566620-36566740
64251 chr10 114711273 114711273 1 + G A SKCM 114711291 + 114711271 114711311 41 AAGGGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC AAAGGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC < 41bp 1 0.371779191283174 1 0.0392322540283203 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114711291 chr10:114711273 synonymous SNV . 0 3 hm5C_associated_SNPs_33089 0 0 2 GRWD1 POSTAR2 ENCODE chr10:114711253-114711286
64251 chr19 41135392 41135392 1 + C T SKCM 41135396 + 41135376 41135416 41 CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCAC CCTTCCGCTGCATCTGTCGCCCGGGATTCGCACCCACGCAC < 41bp 1 0.635446226063241 1 0.887798607349396 experiment 0.729107547873519 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41135396 chr19:41135392 synonymous SNV . 0 17 hm5C_associated_SNPs_33090 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41135363-41135406
64251 chr5 150406548 150406548 1 + G A SKCM 150406545 + 150406525 150406565 41 CCAATTTGGAAAACAGGAACCAGGAGAGAACTCAGAGATCC CCAATTTGGAAAACAGGAACCAGAAGAGAACTCAGAGATCC < 41bp 1 0.752721622159318 1 0.773754835128784 experiment 0.494556755681364 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control GPX3 ENSG00000211445 CDS Human protein_coding chr5:150406545 chr5:150406548 unknown 0.999 3 24 hm5C_associated_SNPs_33091 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:150406537-150406557
64251 chr16 78143687 78143687 1 + G A SKCM 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTGCCATACGAATGGGAACAAGAAACTGATGAGAACGGA < 41bp 1 0.352125546210641 1 0.434370934963226 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143687 nonsynonymous SNV 0.992 4 13 hm5C_associated_SNPs_33093 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143676-78143702
64251 chr15 99672295 99672295 1 + G A SKCM 99672281 + 99672261 99672301 41 GGAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGGGAAGG GGAGATTATTTTTCAGGGCCCCATTTCTGCTGCAAGGAAGG < 41bp 1 0.00732748626881552 1 0.0692420601844788 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99672281 chr15:99672295 nonsynonymous SNV 0.012 0 35 hm5C_associated_SNPs_33096 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:99672290-99672304
64251 chr15 99672295 99672295 1 + G A SKCM 99672282 + 99672262 99672302 41 GAGATTATTTTTCAGGGCCCCATTTCTGCTGCAGGGAAGGT GAGATTATTTTTCAGGGCCCCATTTCTGCTGCAAGGAAGGT < 41bp 1 0.00733382458498837 1 0.136484324932098 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99672282 chr15:99672295 nonsynonymous SNV 0.012 0 34 hm5C_associated_SNPs_33097 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:99672290-99672304
64251 chrX 73046874 73046874 1 - C T SKCM 73046871 - 73046851 73046891 41 GAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAA GAGGACTAAGATGGAAAACCCATGTTCCAAGATAGATAGAA < 41bp 1 0.137735739356032 1 0.126697540283203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046871 chrX:73046874 . . 0 18 hm5C_associated_SNPs_33098 0 0 71 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046874 73046874 1 - C T SKCM 73046873 - 73046853 73046893 41 CCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAG CCGAGGACTAAGATGGAAAACCCATGTTCCAAGATAGATAG < 41bp 1 0.167389817818808 1 0.0521634221076965 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046873 chrX:73046874 . . 0 20 hm5C_associated_SNPs_33099 0 0 71 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046874 73046874 1 - C T SKCM 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAAC < 41bp 1 0.213158828941811 1 0.310780882835388 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046874 . . 0 40 hm5C_associated_SNPs_33100 0 0 71 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046874 73046874 1 - C T SKCM 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAA < 41bp 1 0.413594563864605 1 0.114596247673035 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046874 . . 0 41 hm5C_associated_SNPs_33101 0 0 71 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chr12 70704717 70704717 1 + G A SKCM 70704725 + 70704705 70704745 41 AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA AAGAAGTTTGTAAAGGGGGTCGACAGTGACTACCATGACGA < 41bp 1 0.666475069741208 1 0.380755633115768 experiment 0.667049860517584 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70704725 chr12:70704717 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_33102 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:70704691-70704731
64251 chr8 6302730 6302730 1 + C T SKCM 6302737 + 6302717 6302757 41 GGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGA GGCCGTGCAACTTTGAGTTGCGTGACTTCTGCCCCTGAAGA < 41bp 1 0.585932560988563 1 0.160093665122986 experiment 0.828134878022873 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302737 chr8:6302730 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_33103 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr8:6302702-6302730
64251 chr1 12027068 12027068 1 + C T SKCM 12027067 + 12027047 12027087 41 TGCCCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC TGCCCGGATGTCTATTGGTTCTCCATCTTCACGGAGGTGGC < 41bp 1 0.746049177944377 1 0.8616583943367 experiment 0.507901644111246 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027067 chr1:12027068 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_33104 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:12027050-12027072
64251 chr1 12027068 12027068 1 + C T SKCM 12027087 + 12027067 12027107 41 CCCCATCTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG CTCCATCTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG < 41bp 1 0.194668549742267 1 0.0957699418067932 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027087 chr1:12027068 nonsynonymous SNV 0.999 5 2 hm5C_associated_SNPs_33105 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:12027050-12027072
64251 chr3 33877671 33877671 1 + C T SKCM 33877665 + 33877645 33877685 41 ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT ATGACTTCATTTATCATGATCGAGTTTCAGACCTTAAAGAT < 41bp 1 0.51644307680478 1 0.517002761363983 experiment 0.96711384639044 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877665 chr3:33877671 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_33106 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33877640-33877700
64251 chr1 32691786 32691786 1 + C T SKCM 32691784 + 32691764 32691804 41 GACTCCAGGAAAGCAGCTGGCCCTTCTCAAGACCAATTCGG GACTCCAGGAAAGCAGCTGGCCTTTCTCAAGACCAATTCGG < 41bp 1 0.051145512428147 1 0.0220496654510498 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3I ENSG00000084623 CDS Human protein_coding chr1:32691784 chr1:32691786 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_33109 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:32691760-32691840
64251 chr5 34936318 34936318 1 + G A SKCM 34936300 + 34936280 34936320 41 AAATGATTGCCAAGGAAGAACTAGAATCTGTGTTAGAGGAA AAATGATTGCCAAGGAAGAACTAGAATCTGTGTTAGAGAAA < 41bp 1 0.721354307018357 1 0.422504365444183 experiment 0.557291385963286 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34936300 chr5:34936318 nonsynonymous SNV 0.110 0 39 hm5C_associated_SNPs_33110 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34936253-34936327
64251 chr12 22811976 22811976 1 + C T SKCM 22811993 + 22811973 22812013 41 ATCCATGCTATTCATGCACACAATGGCTGGATCCCCAAATC ATCTATGCTATTCATGCACACAATGGCTGGATCCCCAAATC < 41bp 1 0.422044021384137 1 0.22485426068306 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22811993 chr12:22811976 nonsynonymous SNV 1.000 5 4 hm5C_associated_SNPs_33111 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:22811945-22811983
64251 chr11 57427179 57427179 1 + C T SKCM 57427163 + 57427143 57427183 41 TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCA TTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGTCGCA < 41bp 1 0.55455716829021 1 0.260128825902939 experiment 0.89088566341958 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427163 chr11:57427179 synonymous SNV . 0 37 hm5C_associated_SNPs_33113 0 0 1 RBM15 POSTAR2 ENCODE chr11:57427145-57427202
64251 chr16 30680186 30680186 1 + C T SKCM 30680193 + 30680173 30680213 41 CTGCACCGCAGTCCTCTGACCTTTCCTGCCTGGGTCCGGCC CTGCACCGCAGTCTTCTGACCTTTCCTGCCTGGGTCCGGCC < 41bp 1 0.0585545147838986 1 0.0213958919048309 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30680193 chr16:30680186 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_33115 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30680157-30680190
64251 chr19 13049538 13049538 1 + C T SKCM 13049544 + 13049524 13049564 41 CTCCTCGGCCTGGCCGTCGCCGAGCCTGCCGTCTACTTCAA CTCCTCGGCCTGGCTGTCGCCGAGCCTGCCGTCTACTTCAA < 41bp 1 0.661758121823731 1 0.66342306137085 experiment 0.676483756352539 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049544 chr19:13049538 synonymous SNV . 0 15 hm5C_associated_SNPs_33116 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13049420-13049540
64251 chr19 13049538 13049538 1 + C T SKCM 13049553 + 13049533 13049573 41 CTGGCCGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTT CTGGCTGTCGCCGAGCCTGCCGTCTACTTCAAGGAGCAGTT < 41bp 1 0.23177145897809 1 0.22746953368187 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13049553 chr19:13049538 synonymous SNV . 0 6 hm5C_associated_SNPs_33117 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13049420-13049540
64251 chr5 176522656 176522656 1 + T A SKCM 176522651 + 176522631 176522671 41 TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGG TCCTCGGAGCAGTGAGGGGCCGCTCACCTTCCCAGTCCTGG < 41bp 1 0.143401367327738 1 0.0983187556266785 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522651 chr5:176522656 nonsynonymous SNV 0.768 2 26 hm5C_associated_SNPs_33118 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:176522656-176522657
64251 chr5 176522656 176522656 1 + T A SKCM 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCGCTCACCTTCCCAGTCCTGGTCTCCT < 41bp 1 0.036707424829559 1 0.0403641760349274 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522656 nonsynonymous SNV 0.768 2 20 hm5C_associated_SNPs_33119 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:176522656-176522657
64251 chr6 35423815 35423815 1 + C T SKCM 35423816 + 35423796 35423836 41 GGGGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAA GGGGCAGGAGGTTGAAATCTCCCCAGGCTCCAGACCCTGAA < 41bp 1 0.712759033727399 1 0.490403354167938 experiment 0.574481932545202 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423816 chr6:35423815 synonymous SNV . 0 20 hm5C_associated_SNPs_33120 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423815 35423815 1 + C T SKCM 35423818 + 35423798 35423838 41 GGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGA GGCAGGAGGTTGAAATCTCCCCAGGCTCCAGACCCTGAAGA < 41bp 1 0.591029013250842 1 0.843505620956421 experiment 0.817941973498316 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423818 chr6:35423815 synonymous SNV . 0 18 hm5C_associated_SNPs_33121 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423815 35423815 1 + C T SKCM 35423819 + 35423799 35423839 41 GCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGAA GCAGGAGGTTGAAATCTCCCCAGGCTCCAGACCCTGAAGAA < 41bp 1 0.582303260528678 1 0.660205006599426 experiment 0.835393478942644 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423819 chr6:35423815 synonymous SNV . 0 17 hm5C_associated_SNPs_33122 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr2 177015087 177015087 1 + C T SKCM 177015069 + 177015049 177015089 41 TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGT TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCTGT < 41bp 1 0.607281649251156 1 0.0779888033866882 experiment 0.785436701497688 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015069 chr2:177015087 . . 0 39 hm5C_associated_SNPs_33123 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr2 177015087 177015087 1 + C T SKCM 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCTGTA < 41bp 1 0.375069235833025 1 0.119473874568939 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015087 . . 0 38 hm5C_associated_SNPs_33124 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chr2:177015040-177015100
64251 chr19 18975031 18975031 1 + C T SKCM 18975023 + 18975003 18975043 41 ATGTATGATGCCCGGGAGGCCATCATCCCAGGCTCCGTCTA ATGTATGATGCCCGGGAGGCCATCATCCTAGGCTCCGTCTA < 41bp 1 0.506199142553254 1 0.0751229524612427 experiment 0.987601714893492 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18975023 chr19:18975031 nonsynonymous SNV 0.951 3 29 hm5C_associated_SNPs_33125 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:18975030-18975031
64251 chr19 59060583 59060583 1 + C T SKCM 59060584 + 59060564 59060604 41 GAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTC GAACCCCTGGTGCCCCACCTCTGGCTGGCATGGCCATTGTC < 41bp 1 0.571110659157556 1 0.522651255130768 experiment 0.857778681684888 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060584 chr19:59060583 synonymous SNV . 0 20 hm5C_associated_SNPs_33126 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:59060527-59060592
64251 chr19 59060583 59060583 1 + C T SKCM 59060588 + 59060568 59060608 41 CCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGG CCCTGGTGCCCCACCTCTGGCTGGCATGGCCATTGTCAAGG < 41bp 1 0.47844347260764 1 0.0364223420619965 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060588 chr19:59060583 synonymous SNV . 0 16 hm5C_associated_SNPs_33127 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:59060527-59060592
64251 chr19 59060583 59060583 1 + C T SKCM 59060592 + 59060572 59060612 41 GGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGGTAAG GGTGCCCCACCTCTGGCTGGCATGGCCATTGTCAAGGTAAG < 41bp 1 0.155442248698678 1 0.103716641664505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060592 chr19:59060583 synonymous SNV . 0 12 hm5C_associated_SNPs_33128 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:59060527-59060592
64251 chr6 31912780 31912780 1 + C T SKCM 31912772 + 31912752 31912792 41 GGCAGGAGAATCTGGGGGAGCAGTTTTCCTTGAGCGGAGAT GGCAGGAGAATCTGGGGGAGCAGTTTTCTTTGAGCGGAGAT < 41bp 1 0.161462290392578 1 0.289608031511307 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C2 ENSG00000166278 CDS Human protein_coding chr6:31912772 chr6:31912780 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_33129 0 0 2 PRPF8 POSTAR2 ENCODE chr6:31912762-31912859
64251 chr6 31929390 31929390 1 + C T SKCM 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCTCTGTGGAC < 41bp 1 0.265193829307469 1 0.264280259609222 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929390 nonsynonymous SNV 0.605 1 33 hm5C_associated_SNPs_33130 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr12 112227679 112227679 1 + G A SKCM 112227678 + 112227658 112227698 41 GGGAAAACCATCCCCATTGACGGAGACTTCTTCAGCTACAC GGGAAAACCATCCCCATTGACAGAGACTTCTTCAGCTACAC < 41bp 1 0.698957956667367 1 0.805547416210175 experiment 0.602084086665265 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112227678 chr12:112227679 nonsynonymous SNV 0.795 4 22 hm5C_associated_SNPs_33131 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112227652-112227684
64251 chr14 21544735 21544735 1 + C T SKCM 21544752 + 21544732 21544772 41 ATCCTCCCCTTGTTCAGCGGCTGCTGATTCTCATTCATGAT ATCTTCCCCTTGTTCAGCGGCTGCTGATTCTCATTCATGAT < 41bp 1 0.140350806658048 1 0.112016052007675 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21544752 chr14:21544735 nonsynonymous SNV 0.943 0 4 hm5C_associated_SNPs_33132 0 0 3 NOL12 POSTAR2 ENCODE chr14:21544721-21544752
64251 chr16 57786721 57786721 1 + C T SKCM 57786702 + 57786682 57786722 41 TGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGCTGCCT TGGCCCAGGAGCGTCCTCTTCAACCCAGACGGCTGCTGCTT < 41bp 1 0.43385934779962 1 0.189834415912628 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786702 chr16:57786721 synonymous SNV . 0 40 hm5C_associated_SNPs_33133 0 0 1 PPIG POSTAR2 ENCODE chr16:57786704-57786734
64251 chr16 5128006 5128006 1 + C T SKCM 5128001 + 5127981 5128021 41 ATGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA ATGAAGCTGGGCAGCATGCACTCTCTGTTCAGGGCCCGGTA < 41bp 1 0.420508702377621 1 0.0296281278133392 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128001 chr16:5128006 nonsynonymous SNV 0.001 1 26 hm5C_associated_SNPs_33134 0 0 2 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr5 231076 231076 1 + C T SKCM 231073 + 231053 231093 41 CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAG CCATGATCACCAGGGCAGGCCTTTCTTGCCAGGACCTAGAG < 41bp 1 0.102008506043391 1 0.0595802068710327 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:231073 chr5:231076 nonsynonymous SNV 0.834 1 24 hm5C_associated_SNPs_33135 0 0 4 RPS3 POSTAR2 ENCODE chr5:230990-231097
64251 chr9 108510368 108510368 1 + C T SKCM 108510356 + 108510336 108510376 41 AATGTGTTTTATTTTCAGCCCTGCCAAGGTAACCCTGCTGG AATGTGTTTTATTTTCAGCCCTGCCAAGGTAATCCTGCTGG < 41bp 1 0.251676044360811 1 0.0616824328899384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108510356 chr9:108510368 nonsynonymous SNV 0.874 4 33 hm5C_associated_SNPs_33136 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:108510356-108510382
64251 chr19 42729920 42729920 1 + C T SKCM 42729916 + 42729896 42729936 41 CTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACC CTCCAAGTCCTTTGCCTCAGCTTCTCGGCTGTCCCGGCACC < 41bp 1 0.223166804018161 1 0.104952245950699 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729916 chr19:42729920 synonymous SNV . 0 25 hm5C_associated_SNPs_33137 0 0 2 RBM15 POSTAR2 ENCODE chr19:42729889-42729947
64251 chr8 144332265 144332265 1 + G A SKCM 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAAAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT < 41bp 1 0.221199596576019 1 0.212874889373779 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332265 synonymous SNV . 0 6 hm5C_associated_SNPs_33138 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:144332257-144332293
64251 chr17 65908991 65908991 1 + C T SKCM 65909010 + 65908990 65909030 41 TCCCTGACCACCACGGGAGGCACACTGGTTACATCTATGAC TTCCTGACCACCACGGGAGGCACACTGGTTACATCTATGAC < 41bp 1 0.137374815078036 1 0.0685949623584747 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65909010 chr17:65908991 nonsynonymous SNV 0.781 3 2 hm5C_associated_SNPs_33140 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:65908974-65908998
64251 chr13 26923280 26923280 1 + G A SKCM 26923264 + 26923244 26923284 41 TCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAGGTGT TCTTCAAAAGGTGTTTCTGTCTCATGCTGATAGGAAAGTGT < 41bp 1 0.456490067960282 1 0.23614838719368 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK8 ENSG00000132964 CDS Human protein_coding chr13:26923264 chr13:26923280 synonymous SNV . 0 37 hm5C_associated_SNPs_33158 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr13:26923249-26923283
64251 chr16 29811295 29811295 1 + C T SKCM 29811301 + 29811281 29811321 41 GAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGAGATCGG GAGGCAAAGAGAGCTCGAGGCCCTGAGGAAGAGGAGATCGG < 41bp 1 0.137687037363034 1 0.103133380413055 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811301 chr16:29811295 synonymous SNV . 0 15 hm5C_associated_SNPs_33159 0 0 4 DDX24 POSTAR2 ENCODE chr16:29811257-29811316
64251 chr17 41345501 41345501 1 + C T SKCM 41345492 + 41345472 41345512 41 TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGCGTC TGCCCCAGCCTTGGAGGGAACGTATACTTTCCATTGGCGTC < 41bp 1 0.201788874687713 1 0.1035096347332 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345492 chr17:41345501 nonsynonymous SNV 0.983 4 30 hm5C_associated_SNPs_33160 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:41345479-41345507
64251 chr16 66976133 66976133 1 + C T SKCM 66976124 + 66976104 66976144 41 GCGGACTCCATGTTTGTGATCCCTGCACTCCAAGTAGCACA GCGGACTCCATGTTTGTGATCCCTGCACTTCAAGTAGCACA < 41bp 1 0.0814953168026844 1 0.0394364297389984 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66976124 chr16:66976133 synonymous SNV . 0 30 hm5C_associated_SNPs_33162 0 0 1 PRPF8 POSTAR2 ENCODE chr16:66976121-66976223
64251 chr16 29811294 29811294 1 + C T SKCM 29811295 + 29811275 29811315 41 CCACCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGA CCACCAGAGGCAAAGAGAGTCCGAGGCCCTGAGGAAGAGGA < 41bp 1 0.276720593373582 1 0.723181188106537 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811295 chr16:29811294 nonsynonymous SNV 0.968 0 20 hm5C_associated_SNPs_33163 0 0 5 BUD13 POSTAR2 ENCODE chr16:29811280-29811294
64251 chr16 29811294 29811294 1 + C T SKCM 29811301 + 29811281 29811321 41 GAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGGAGATCGG GAGGCAAAGAGAGTCCGAGGCCCTGAGGAAGAGGAGATCGG < 41bp 1 0.132215936773211 1 0.0988064408302307 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811301 chr16:29811294 nonsynonymous SNV 0.968 0 14 hm5C_associated_SNPs_33164 0 0 5 BUD13 POSTAR2 ENCODE chr16:29811280-29811294
64251 chr7 4830461 4830461 1 + C T SKCM 4830446 + 4830426 4830466 41 TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCGTGC TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCATCGTGC < 41bp 1 0.0703061909291319 1 0.0228690505027771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830446 chr7:4830461 nonsynonymous SNV 0.024 3 36 hm5C_associated_SNPs_33165 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr7:4830460-4830461
64251 chrX 48759695 48759695 1 + G A SKCM 48759703 + 48759683 48759723 41 GACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGA GACAGGGAACGGAATCGGGACCGCGGGTATGACAAGGCAGA < 41bp 1 0.405405165895672 1 0.112214356660843 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759703 chrX:48759695 nonsynonymous SNV 0.972 1 13 hm5C_associated_SNPs_33166 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr19 36128155 36128155 1 + A T SKCM 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCTAGGTGAT < 41bp 1 0.220535340735172 1 0.498431533575058 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128155 stopgain 1.000 1 34 hm5C_associated_SNPs_33167 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:36128113-36128184
64251 chr2 220366636 220366636 1 + C T SKCM 220366650 + 220366630 220366670 41 CCAGATCCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCA CCAGATTCTGGCTGGGAGCCCCGAGGCATTCTTCGTGCTCA < 41bp 1 0.470136957367429 1 0.379182100296021 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366650 chr2:220366636 synonymous SNV . 0 7 hm5C_associated_SNPs_33168 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:220366619-220366655
64251 chr2 160053229 160053229 1 + C T SKCM 160053224 + 160053204 160053244 41 CTTGTGAGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTG CTTGTGAGTGGTCGCCGGGTCCTCCTCAGCCAGGCACCCTG < 41bp 1 0.104496318173053 1 0.0434953570365906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160053224 chr2:160053229 synonymous SNV . 0 26 hm5C_associated_SNPs_33169 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:160053209-160053229
64251 chr2 160053229 160053229 1 + C T SKCM 160053230 + 160053210 160053250 41 AGTGGTCGCCGGGTCCTCCCCAGCCAGGCACCCTGAGGAAG AGTGGTCGCCGGGTCCTCCTCAGCCAGGCACCCTGAGGAAG < 41bp 1 0.628359616359399 1 0.513895750045776 experiment 0.743280767281203 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160053230 chr2:160053229 synonymous SNV . 0 20 hm5C_associated_SNPs_33170 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:160053209-160053229
64251 chr1 206821315 206821315 1 + G A SKCM 206821305 + 206821285 206821325 41 CGTCAAGCAGCTGAGGAGATCCGGATTTTGGAGCATCTTAA CGTCAAGCAGCTGAGGAGATCCGGATTTTGAAGCATCTTAA < 41bp 1 0.63814112012906 1 0.708385705947876 experiment 0.72371775974188 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821305 chr1:206821315 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_33172 0 0 4 RBM15 POSTAR2 ENCODE chr1:206821288-206821319
64251 chr16 28994599 28994599 1 + C T SKCM 28994609 + 28994589 28994629 41 GGAGCCCCTACCTCATTGGCCTGGTGAGCATTATTTCTTGG GGAGCCCCTATCTCATTGGCCTGGTGAGCATTATTTCTTGG < 41bp 1 0.505811788557597 1 0.0740248560905457 experiment 0.988376422884805 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28994609 chr16:28994599 synonymous SNV . 0 11 hm5C_associated_SNPs_33173 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28994573-28994599
64251 chr12 132514418 132514418 1 + C T SKCM 132514398 + 132514378 132514418 41 GCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCC GCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCT < 41bp 1 0.449940629918484 1 0.977134585380554 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132514398 chr12:132514418 nonsynonymous SNV 0.867 4 41 hm5C_associated_SNPs_33174 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132514397-132514438
64251 chr3 16312571 16312571 1 + C T SKCM 16312562 + 16312542 16312582 41 TGACACTCAGCACTTTGCGCCACCTTACTCTAACCAGGTGA TGACACTCAGCACTTTGCGCCACCTTACTTTAACCAGGTGA < 41bp 1 0.20883431791402 1 0.201472550630569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16312562 chr3:16312571 synonymous SNV . 0 30 hm5C_associated_SNPs_33175 0 0 2 GPKOW POSTAR2 ENCODE chr3:16312557-16312611
64251 chr22 39078936 39078936 1 + C T SKCM 39078940 + 39078920 39078960 41 CTTTATGATCCTGGTTCTTCCCGTTGTCTTTGAGACGGAGA CTTTATGATCCTGGTTTTTCCCGTTGTCTTTGAGACGGAGA < 41bp 1 0.325450246601276 1 0.174127250909805 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078940 chr22:39078936 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_33177 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:39078920-39078940
64251 chr9 131843440 131843440 1 + C T SKCM 131843453 + 131843433 131843473 41 CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC CGCTCCCTGCTTCATGGCGGCCGGTGACCCTCACCCACGTC < 41bp 1 0.370805002071033 1 0.292313039302826 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843453 chr9:131843440 synonymous SNV . 0 8 hm5C_associated_SNPs_33178 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr2 241514990 241514990 1 + C T SKCM 241514997 + 241514977 241515017 41 TCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC TCCTGAGCTTCTTTCCGGAGCTGAAGGAGCAGAGCGTGGAC < 41bp 1 0.584601003223491 1 0.26788055896759 experiment 0.830797993553018 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514997 chr2:241514990 synonymous SNV . 0 14 hm5C_associated_SNPs_33179 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr8 104342114 104342114 1 + C T SKCM 104342108 + 104342088 104342128 41 CAAGAAACTTTGACAGAAATCCAAACCTCACCAGAAACATC CAAGAAACTTTGACAGAAATCCAAACTTCACCAGAAACATC < 41bp 1 0.390375399799174 1 0.112484246492386 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342108 chr8:104342114 synonymous SNV . 0 27 hm5C_associated_SNPs_33180 0 0 1 GRWD1 POSTAR2 ENCODE chr8:104342102-104342250
64251 chr19 16204368 16204368 1 + A G SKCM 16204363 + 16204343 16204383 41 CAGTATTCTGAAAAGGAGGACAAATATGAAGAAGAAATTAA CAGTATTCTGAAAAGGAGGACAAATGTGAAGAAGAAATTAA < 41bp 1 0.0683312552533882 1 0.240966767072678 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM4 ENSG00000167460 CDS Human protein_coding chr19:16204363 chr19:16204368 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_33183 0 0 2 GPKOW POSTAR2 ENCODE chr19:16204331-16204409
64251 chr7 79842145 79842145 1 + C T SKCM 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATTAAAAAGAGCCCTCTCACTATATGCTATCCAG < 41bp 1 0.131898041021775 1 0.0796118676662445 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842145 synonymous SNV . 0 10 hm5C_associated_SNPs_33184 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr15 64966551 64966551 1 + C T SKCM 64966550 + 64966530 64966570 41 GTCCTAATTGACTGTCCCCACCCAAACTGCAACAAGAAGTA GTCCTAATTGACTGTCCCCACTCAAACTGCAACAAGAAGTA < 41bp 1 0.42838541076358 1 0.797447383403778 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64966550 chr15:64966551 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_33186 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:64966519-64966557
64251 chrX 73042618 73042618 1 - G A SKCM 73042631 - 73042611 73042651 41 AGAGTGGGAATAAGAGAGGGCTTTTTATTTTTTCGTTCATA AGAGTGGGAATAAGAGAGGGCTTTTTATTTTTTTGTTCATA < 41bp 1 0.0101767376406145 1 0.0230987966060638 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042631 chrX:73042618 . . 0 34 hm5C_associated_SNPs_33188 0 0 72 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr11 63719957 63719957 1 + C T SKCM 63719969 + 63719949 63719989 41 TACCTCATCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT TACCTCATTGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT < 41bp 1 0.656035775939326 1 0.603570818901062 experiment 0.687928448121349 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719969 chr11:63719957 synonymous SNV . 0 9 hm5C_associated_SNPs_33189 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:63719957-63719958
64251 chr2 32897411 32897411 1 + G A SKCM 32897396 + 32897376 32897416 41 TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGAATCTG < 41bp 1 0.17786663465723 1 0.102902591228485 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32897396 chr2:32897411 nonsynonymous SNV 0.720 1 36 hm5C_associated_SNPs_33190 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32897348-32897444
64251 chr12 53427596 53427596 1 + C T SKCM 53427592 + 53427572 53427612 41 AAGTTTCATTTAACTTAGGTCCCCCCCAAAGACCCAAACTG AAGTTTCATTTAACTTAGGTCCCCTCCAAAGACCCAAACTG < 41bp 1 0.0609808319369322 1 0.0955252945423126 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53427592 chr12:53427596 nonsynonymous SNV 0.896 1 25 hm5C_associated_SNPs_33192 0 0 6 LIN28B POSTAR2 ENCODE chr12:53427589-53427622
64251 chr11 75279839 75279839 1 + C T SKCM 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTTCTATACCGTGGGTGTCATGATGATGCACCGGACAGG < 41bp 1 0.56349209290398 1 0.177629977464676 experiment 0.873015814192039 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279839 nonsynonymous SNV 0.984 3 5 hm5C_associated_SNPs_33193 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:75279811-75279852
64251 chr19 35504577 35504577 1 + C T SKCM 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGTAGCGA < 41bp 1 0.0170689314670796 1 0.0491397380828857 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504577 synonymous SNV . 0 36 hm5C_associated_SNPs_33194 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chr19 35504577 35504577 1 + C T SKCM 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCAGTAGCGACGCAG < 41bp 1 0.721087801185525 1 0.328398585319519 experiment 0.55782439762895 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504577 synonymous SNV . 0 31 hm5C_associated_SNPs_33195 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chrX 73045887 73045887 1 - C T SKCM 73045871 - 73045851 73045891 41 CCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC CCTGAGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACTCC < 41bp 1 0.670184184123966 1 0.806113660335541 experiment 0.659631631752068 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045871 chrX:73045887 . . 0 5 hm5C_associated_SNPs_33200 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045887 73045887 1 - C T SKCM 73045873 - 73045853 73045893 41 TGCCTGGGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT TGCCTGAGACAAAGCGAGGTCCCAAGGGGACAGCCTGAACT < 41bp 1 0.250504213257256 1 0.350282818078995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045873 chrX:73045887 . . 0 7 hm5C_associated_SNPs_33201 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045887 73045887 1 - C T SKCM 73045890 - 73045870 73045910 41 TATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCCA TATGGAAAGGGTGACTGTGCCTGAGACAAAGCGAGGTCCCA < 41bp 1 0.496117250152511 1 0.139786332845688 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045890 chrX:73045887 . . 0 24 hm5C_associated_SNPs_33202 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045887 73045887 1 - C T SKCM 73045891 - 73045871 73045911 41 TTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCC TTATGGAAAGGGTGACTGTGCCTGAGACAAAGCGAGGTCCC < 41bp 1 0.39633346188479 1 0.0893926620483398 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045891 chrX:73045887 . . 0 25 hm5C_associated_SNPs_33203 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045887 73045887 1 - C T SKCM 73045896 - 73045876 73045916 41 GATGGTTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAG GATGGTTATGGAAAGGGTGACTGTGCCTGAGACAAAGCGAG < 41bp 1 0.211213601782905 1 0.0962962508201599 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045896 chrX:73045887 . . 0 30 hm5C_associated_SNPs_33204 0 0 94 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr1 39776643 39776643 1 + G A SKCM 39776662 + 39776642 39776682 41 GGACAATGCATTAAGGATTGCAGAGCAAGAGGTAAGCCCTA GAACAATGCATTAAGGATTGCAGAGCAAGAGGTAAGCCCTA < 41bp 1 0.187831186838639 1 0.270542800426483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39776662 chr1:39776643 nonsynonymous SNV 0.965 1 2 hm5C_associated_SNPs_33205 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:39776594-39776644
64251 chr21 46900040 46900040 1 + C T SKCM 46900048 + 46900028 46900068 41 GCCTCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC GCCTCCAGGGCCTCCAGGACCCTCCTTCAGACACGACAAGC < 41bp 1 0.0536660651901608 1 0.0641683340072632 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900048 chr21:46900040 synonymous SNV . 0 13 hm5C_associated_SNPs_33206 0 0 3 BUD13 POSTAR2 ENCODE chr21:46899984-46900042
64251 chr1 206902126 206902126 1 + C T SKCM 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATTGTACGGATCGTGGATGTGTACGAGAATCT < 41bp 1 0.459849010813321 1 0.118656665086746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902126 synonymous SNV . 0 12 hm5C_associated_SNPs_33207 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:206902097-206902132
64251 chr3 41278184 41278184 1 + C T SKCM 41278166 + 41278146 41278186 41 TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGCCAA TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGCTAA < 41bp 1 0.337573446688026 1 0.153887927532196 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41278166 chr3:41278184 nonsynonymous SNV 0.981 2 39 hm5C_associated_SNPs_33209 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:41278150-41278208
64251 chr3 41278183 41278183 1 + C T SKCM 41278166 + 41278146 41278186 41 TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGCCAA TTCAGTTGAGCTGACCAGCTCTCTCTTCAGAACAGAGTCAA < 41bp 1 0.343425333871698 1 0.210598796606064 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41278166 chr3:41278183 nonsynonymous SNV 0.988 1 38 hm5C_associated_SNPs_33212 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:41278150-41278208
64251 chr6 44197193 44197193 1 + C T SKCM 44197173 + 44197153 44197193 41 TCATGCTGGGTCTGGGAACGCTGCTCCCGTGGAATTTTTTC TCATGCTGGGTCTGGGAACGCTGCTCCCGTGGAATTTTTTT < 41bp 1 0.402759526655685 1 0.119780629873276 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197173 chr6:44197193 synonymous SNV . 0 41 hm5C_associated_SNPs_33214 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:44197168-44197196
64251 chr3 126751319 126751319 1 + C T SKCM 126751338 + 126751318 126751358 41 TCGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACCTC TTGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACCTC < 41bp 1 0.331081233960043 1 0.238184988498688 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751338 chr3:126751319 nonsynonymous SNV 0.966 4 2 hm5C_associated_SNPs_33215 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126751298-126751330
64251 chr8 28574278 28574278 1 + C T SKCM 28574271 + 28574251 28574291 41 CGTTTATGTTACAGAAAATGCAGACATCGCCTGCCTTTACG CGTTTATGTTACAGAAAATGCAGACATTGCCTGCCTTTACG < 41bp 1 0.193548651767182 1 0.0793914496898651 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574271 chr8:28574278 synonymous SNV . 0 28 hm5C_associated_SNPs_33217 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574273-28574291
64251 chr6 31914153 31914153 1 + T G SKCM 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGGGACCACCACTCCATGGTCTTTGGCCCGGC < 41bp 1 0.763809212812004 1 0.980685472488403 experiment 0.472381574375992 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914153 nonsynonymous SNV 0.764 0 12 hm5C_associated_SNPs_33218 0 0 4 DDX3X POSTAR2 ENCODE chr6:31914149-31914165
64251 chr6 149691193 149691193 1 + C T SKCM 149691182 + 149691162 149691202 41 TTCAGGTTTTACATGACCTGCGACAAAAATTCCCTGAAGTA TTCAGGTTTTACATGACCTGCGACAAAAATTTCCTGAAGTA < 41bp 1 0.541744504754776 1 0.209628015756607 experiment 0.916510990490448 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAB2 ENSG00000055208 CDS Human protein_coding chr6:149691182 chr6:149691193 synonymous SNV . 0 32 hm5C_associated_SNPs_33219 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr6:149691158-149691194
64251 chr2 169551552 169551552 1 + C T SKCM 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATTAAAA < 41bp 1 0.454981205647993 1 0.286716520786285 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551552 synonymous SNV . 0 37 hm5C_associated_SNPs_33220 0 0 1 ZNF622 POSTAR2 ENCODE chr2:169551465-169551564
64251 chr20 61595008 61595008 1 + C T SKCM 61595023 + 61595003 61595043 41 TTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGG TTCTTTGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGGGG < 41bp 1 0.510681205978817 1 0.491861253976822 experiment 0.978637588042366 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61595023 chr20:61595008 synonymous SNV . 0 6 hm5C_associated_SNPs_33222 0 0 6 GRWD1 POSTAR2 ENCODE chr20:61595001-61595016
64251 chr12 52635367 52635367 1 + G A SKCM 52635378 + 52635358 52635398 41 GCGCAGTATGAGGAGATGGCCAAATGCAGCCGGGCTGAGGC GCGCAGTATAAGGAGATGGCCAAATGCAGCCGGGCTGAGGC < 41bp 1 0.317522826035546 1 0.352155148983002 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52635378 chr12:52635367 nonsynonymous SNV 0.940 4 10 hm5C_associated_SNPs_33225 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:52635360-52635380
64251 chr1 155258175 155258175 1 + C T SKCM 155258172 + 155258152 155258192 41 CTCAGGGCTCCTGGCCAAACCTCCAAGGACAGCCCAGCCCC CTCAGGGCTCCTGGCCAAACCTCTAAGGACAGCCCAGCCCC < 41bp 1 0.778310786195017 1 0.934669256210327 experiment 0.443378427609966 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout HCN3 ENSG00000143630 CDS Human protein_coding chr1:155258172 chr1:155258175 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_33226 0 0 1 DDX59 POSTAR2 ENCODE chr1:155258139-155258181
64251 chr8 25168015 25168015 1 + C T SKCM 25168004 + 25167984 25168024 41 ACACTTGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG ACACTTGGTTGATAGATCAACAGCAATAGCCTGGAAGATGG < 41bp 1 0.60457223341755 1 0.274480700492859 experiment 0.7908555331649 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25168004 chr8:25168015 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_33227 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:25167998-25168019
64251 chr3 41275119 41275119 1 + T G SKCM 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTGGCAAT < 41bp 1 0.117472513486433 1 0.189842700958252 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275119 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_33229 0 0 21 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr4 57881716 57881716 1 + G A SKCM 57881714 + 57881694 57881734 41 GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTA GAGGGAGATTCGGATCTATACGAATGCAGGCCGTATTTGTA < 41bp 1 0.470685661519925 1 0.260179489850998 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57881714 chr4:57881716 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_33230 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57881674-57881738
64251 chr11 58892632 58892632 1 + C T SKCM 58892617 + 58892597 58892637 41 CCCAGGATTAGAAATTATTACTTTTGTAGTTTGCCCCGAAA CCCAGGATTAGAAATTATTACTTTTGTAGTTTGCCTCGAAA < 41bp 1 0.137093409664777 1 0.0529019832611084 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM111B ENSG00000189057 CDS Human protein_coding chr11:58892617 chr11:58892632 synonymous SNV . 0 36 hm5C_associated_SNPs_33231 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:58892615-58892644
64251 chr22 41735889 41735889 1 + C T SKCM 41735900 + 41735880 41735920 41 CCCGTGTTCCCCGGCGGGACCCCACTGCTACCACCTGTGGT CCCGTGTTCTCCGGCGGGACCCCACTGCTACCACCTGTGGT < 41bp 1 0.0722556240152919 1 0.0698600113391876 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735900 chr22:41735889 nonsynonymous SNV 0.955 1 10 hm5C_associated_SNPs_33232 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41735876-41735897
64251 chr22 32217490 32217490 1 + C T SKCM 32217507 + 32217487 32217527 41 GGGCCATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG GGGTCATCCGGAGAAGCCATCCAGATCCACCACCAGACCCG < 41bp 1 0.561464753183426 1 0.220364689826965 experiment 0.877070493633148 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32217507 chr22:32217490 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_33233 0 0 1 PPIG POSTAR2 ENCODE chr22:32217487-32217563
64251 chr2 85133146 85133146 1 + C T SKCM 85133155 + 85133135 85133175 41 TAAGAAAATGGCAGACAAACCAGACATGGGGGAAATCGCCA TAAGAAAATGGTAGACAAACCAGACATGGGGGAAATCGCCA < 41bp 1 0.407038983999874 1 0.134329617023468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMSB10 ENSG00000034510 CDS Human protein_coding chr2:85133155 chr2:85133146 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_33239 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:85133132-85133163
64251 chr19 30106215 30106215 1 + G T SKCM 30106212 + 30106192 30106232 41 GGCTTTATTTCCTACATTTACGGGAGCAAATTCCAGCTTCG GGCTTTATTTCCTACATTTACGGTAGCAAATTCCAGCTTCG < 41bp 1 0.737209136319184 1 0.445613861083984 experiment 0.525581727361632 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control POP4 ENSG00000105171 CDS Human protein_coding chr19:30106212 chr19:30106215 synonymous SNV . 0 24 hm5C_associated_SNPs_33240 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30106158-30106290
64251 chr1 153617557 153617557 1 + C T SKCM 153617537 + 153617517 153617557 41 TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTT < 41bp 1 0.142685093013872 1 0.341169834136963 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617537 chr1:153617557 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_33241 0 0 37 CSTF2 POSTAR2 GSE40859,GSM1003587 chr1:153617520-153617560
64251 chrX 47102868 47102868 1 + G T SKCM 47102871 + 47102851 47102891 41 TTCCTGTCTACCTGCGGGAGCGCACCCCTGCCCGTGACTAC TTCCTGTCTACCTGCGGTAGCGCACCCCTGCCCGTGACTAC < 41bp 1 0.203257698330073 1 0.153014361858368 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47102871 chrX:47102868 stopgain 1.000 0 18 hm5C_associated_SNPs_33242 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:47102838-47102872
64251 chr19 50189399 50189399 1 + C G SKCM 50189383 + 50189363 50189403 41 ATACCGTCAAGGTGGAAGACCTGACCTTCACCTCCCCGTTC ATACCGTCAAGGTGGAAGACCTGACCTTCACCTCCCGGTTC < 41bp 1 0.40048150670927 1 0.0484292805194855 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50189383 chr19:50189399 nonsynonymous SNV 0.971 2 37 hm5C_associated_SNPs_33253 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:50189380-50189400
64251 chrX 128691357 128691357 1 + C T SKCM 128691345 + 128691325 128691365 41 GGGGACTGGATCAGAGAGCGCCGCTTTGAAATCCCTGATGA GGGGACTGGATCAGAGAGCGCCGCTTTGAAATTCCTGATGA < 41bp 1 0.36014722804044 1 0.0596442222595215 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128691345 chrX:128691357 synonymous SNV . 0 33 hm5C_associated_SNPs_33254 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:128691350-128691374
64251 chr11 67353993 67353993 1 + T C SKCM 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTCAAGGCCTCCCTGGCCTCCCCTGAGTACGTGAACC < 41bp 1 0.0171678935204489 1 0.205099016427994 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67353993 nonsynonymous SNV 0.979 2 15 hm5C_associated_SNPs_33255 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 67353993 67353993 1 + T C SKCM 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTCAAGGCCTCCCTGGCCTCCCCTGAGTACGTGAACCT < 41bp 1 0.240845209057459 1 0.213044613599777 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67353993 nonsynonymous SNV 0.979 2 14 hm5C_associated_SNPs_33256 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr5 74638497 74638497 1 + G T SKCM 74638509 + 74638489 74638529 41 TCATAGTGGGGACAGTGACACTGACCATCTGCATGATGTCC TCATAGTGTGGACAGTGACACTGACCATCTGCATGATGTCC < 41bp 1 0.300331731032033 1 0.0707316994667053 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGCR ENSG00000113161 CDS Human protein_coding chr5:74638509 chr5:74638497 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_33258 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:74638493-74638516
64251 chr8 144801635 144801635 1 + C T SKCM 144801634 + 144801614 144801654 41 AGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGGT AGCTGATCCTGGAGACCATCCTACCGCCATCTGAGGAGGGT < 41bp 1 0.206595597923658 1 0.24239706993103 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPK15 ENSG00000181085 CDS Human protein_coding chr8:144801634 chr8:144801635 nonsynonymous SNV 0.143 1 22 hm5C_associated_SNPs_33259 0 0 1 ZNF622 POSTAR2 ENCODE chr8:144801615-144801672
64251 chr2 97007508 97007508 1 + C T SKCM 97007527 + 97007507 97007547 41 CCCAGTCCTCGAAGACTTTCCTCAGAATGACGATGAGAAGG CTCAGTCCTCGAAGACTTTCCTCAGAATGACGATGAGAAGG < 41bp 1 0.569946080180448 1 0.321202039718628 experiment 0.860107839639105 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007527 chr2:97007508 nonsynonymous SNV 0.966 1 2 hm5C_associated_SNPs_33260 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:97007483-97007520
64251 chr1 200869294 200869294 1 + T A SKCM 200869306 + 200869286 200869326 41 CCCAAGGTTCGCCGCAGGATCGGAGCGGCTTACAAACTGGA CCCAAGGTACGCCGCAGGATCGGAGCGGCTTACAAACTGGA < 41bp 1 0.603021042329858 1 0.432577192783356 experiment 0.793957915340285 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200869306 chr1:200869294 synonymous SNV . 0 9 hm5C_associated_SNPs_33261 0 0 1 PPIG POSTAR2 ENCODE chr1:200869214-200869296
64251 chr6 31918680 31918680 1 + G A SKCM 31918695 + 31918675 31918715 41 AACTCGAGCTTTGAGGCTTCCTCCAACTACCACTTGCCAGC AACTCAAGCTTTGAGGCTTCCTCCAACTACCACTTGCCAGC < 41bp 1 0.723429506886298 1 0.850847363471985 experiment 0.553140986227404 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31918695 chr6:31918680 nonsynonymous SNV 0.997 1 6 hm5C_associated_SNPs_33262 0 0 2 RPS3 POSTAR2 ENCODE chr6:31918648-31918690
64251 chr15 52188700 52188700 1 + C T SKCM 52188695 + 52188675 52188715 41 GAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTG GAAATGTTTCAGTCTTGCAGCCACCTGGAGCAATGACCCTG < 41bp 1 0.127895942759366 1 0.0625995099544525 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMOD3 ENSG00000138594 CDS Human protein_coding chr15:52188695 chr15:52188700 nonsynonymous SNV 0.995 5 26 hm5C_associated_SNPs_33264 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:52188675-52188701
64251 chr5 66462575 66462575 1 + C T SKCM 66462585 + 66462565 66462605 41 TCCCTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTC TCCCTGCCCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTC < 41bp 1 0.389557340877095 1 0.599505007266998 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462585 chr5:66462575 nonsynonymous SNV 0.202 1 11 hm5C_associated_SNPs_33265 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462587 + 66462567 66462607 41 CCTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCAC CCTGCCCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTCAC < 41bp 1 0.0636643932504885 1 0.0423896908760071 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462587 chr5:66462575 nonsynonymous SNV 0.202 1 9 hm5C_associated_SNPs_33266 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462588 + 66462568 66462608 41 CTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACA CTGCCCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACA < 41bp 1 0.115044689352652 1 0.0206922292709351 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462588 chr5:66462575 nonsynonymous SNV 0.202 1 8 hm5C_associated_SNPs_33267 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462590 + 66462570 66462610 41 GCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACC GCCCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACC < 41bp 1 0.0720678382057077 1 0.0891749858856201 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462590 chr5:66462575 nonsynonymous SNV 0.202 1 6 hm5C_associated_SNPs_33268 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462591 + 66462571 66462611 41 CCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCA CCCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCA < 41bp 1 0.04939301800536 1 0.417155623435974 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462591 chr5:66462575 nonsynonymous SNV 0.202 1 5 hm5C_associated_SNPs_33269 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462592 + 66462572 66462612 41 CCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCAC CCTTCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCAC < 41bp 1 0.260414750998689 1 0.262357115745544 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462592 chr5:66462575 nonsynonymous SNV 0.202 1 4 hm5C_associated_SNPs_33270 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462575 66462575 1 + C T SKCM 66462595 + 66462575 66462615 41 CCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCC TCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCC < 41bp 1 0.0502069234884143 1 0.0720075368881226 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462595 chr5:66462575 nonsynonymous SNV 0.202 1 1 hm5C_associated_SNPs_33271 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 139889280 139889280 1 + T C SKCM 139889265 + 139889245 139889285 41 AGCAGCTTCTGGAGGGTATGCAGAGGTTGGAAGAGTTCTTC AGCAGCTTCTGGAGGGTATGCAGAGGTTGGAAGAGCTCTTC < 41bp 1 0.722930192530455 1 0.813272774219513 experiment 0.55413961493909 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889265 chr5:139889280 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_33279 0 0 1 FXR2 POSTAR2 ENCODE chr5:139889222-139889282
64251 chr3 136665000 136665000 1 + T G SKCM 136664991 + 136664971 136665011 41 GTTTGGAACCATCACCTCCACAGTGTGATTACATTAGGCCT GTTTGGAACCATCACCTCCACAGTGTGATGACATTAGGCCT < 41bp 1 0.625721653446031 1 0.182479321956635 experiment 0.748556693107937 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664991 chr3:136665000 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_33280 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:136664997-136665026
64251 chr2 74077595 74077595 1 + C T SKCM 74077580 + 74077560 74077600 41 GATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCAT GATTACTGCAACACAGAGAACGAAGAAGAACTTTTTCTCAT < 41bp 1 0.57106174146094 1 0.428724765777588 experiment 0.85787651707812 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077580 chr2:74077595 synonymous SNV . 0 36 hm5C_associated_SNPs_33281 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74077547-74077615
64251 chr5 66462576 66462576 1 + C T SKCM 66462585 + 66462565 66462605 41 TCCCTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTC TCCCTGCCCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTC < 41bp 1 0.352139181230865 1 0.784774899482727 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462585 chr5:66462576 synonymous SNV . 0 12 hm5C_associated_SNPs_33282 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462587 + 66462567 66462607 41 CCTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCAC CCTGCCCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTCAC < 41bp 1 0.0628863971053817 1 0.0267033278942108 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462587 chr5:66462576 synonymous SNV . 0 10 hm5C_associated_SNPs_33283 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462588 + 66462568 66462608 41 CTGCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACA CTGCCCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTCACA < 41bp 1 0.106494982863781 1 0.0145196616649628 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462588 chr5:66462576 synonymous SNV . 0 9 hm5C_associated_SNPs_33284 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462590 + 66462570 66462610 41 GCCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACC GCCCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACC < 41bp 1 0.0654427285201104 1 0.0469478070735931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462590 chr5:66462576 synonymous SNV . 0 7 hm5C_associated_SNPs_33285 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462591 + 66462571 66462611 41 CCCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCA CCCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCA < 41bp 1 0.0522743553677654 1 0.325887560844421 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462591 chr5:66462576 synonymous SNV . 0 6 hm5C_associated_SNPs_33286 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462592 + 66462572 66462612 41 CCTCCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCAC CCTCTTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCAC < 41bp 1 0.246609927842597 1 0.336994111537933 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462592 chr5:66462576 synonymous SNV . 0 5 hm5C_associated_SNPs_33287 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462595 + 66462575 66462615 41 CCTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCC CTTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCC < 41bp 1 0.0452505783531512 1 0.0705040395259857 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462595 chr5:66462576 synonymous SNV . 0 2 hm5C_associated_SNPs_33288 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr5 66462576 66462576 1 + C T SKCM 66462596 + 66462576 66462616 41 CTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCCG TTTCCGGGTCTCCACCCTGCCTCTGGAGTCACACCACCCCG < 41bp 1 0.3835048567212 1 0.253243803977966 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST4 ENSG00000069020 CDS Human protein_coding chr5:66462596 chr5:66462576 synonymous SNV . 0 1 hm5C_associated_SNPs_33289 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:66462548-66462586
64251 chr6 157528033 157528033 1 + G T SKCM 157528014 + 157527994 157528034 41 ATCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGA ATCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGTA < 41bp 1 0.324936319004222 1 0.129084169864655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528014 chr6:157528033 stopgain 1.000 1 40 hm5C_associated_SNPs_33290 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:157528023-157528041
64251 chr6 157528033 157528033 1 + G T SKCM 157528015 + 157527995 157528035 41 TCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGGAG TCCAGCAAGCCAAAAGTCACCGGAACATCAAGCTGCTGTAG < 41bp 1 0.384048573206534 1 0.745666265487671 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARID1B ENSG00000049618 CDS Human protein_coding chr6:157528015 chr6:157528033 stopgain 1.000 1 39 hm5C_associated_SNPs_33291 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:157528023-157528041
64251 chr21 48068504 48068504 1 + C T SKCM 48068501 + 48068481 48068521 41 GGGACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCG GGGACTGGGATCATCAGTCTCTTTTGTGCACACTATGCGCG < 41bp 1 0.275606227655498 1 0.125889837741852 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068501 chr21:48068504 synonymous SNV 0.885 0 24 hm5C_associated_SNPs_33294 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chrX 73046766 73046766 1 - C T SKCM 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGAAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA < 41bp 1 0.484726101838652 1 0.206427365541458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046766 . . 0 9 hm5C_associated_SNPs_33295 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046766 73046766 1 - C T SKCM 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGAAAGTCTC < 41bp 1 0.332343540775482 1 0.482487618923187 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046766 . . 0 34 hm5C_associated_SNPs_33296 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046766 73046766 1 - C T SKCM 73046786 - 73046766 73046806 41 AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGG AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGA < 41bp 1 0.315728585327864 1 0.157204419374466 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046786 chrX:73046766 . . 0 41 hm5C_associated_SNPs_33297 0 0 87 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr14 105936237 105936237 1 + C T SKCM 105936253 + 105936233 105936273 41 TGATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGG TGATTCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGG < 41bp 1 0.226916428995592 1 0.0803355574607849 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936253 chr14:105936237 synonymous SNV . 0 5 hm5C_associated_SNPs_33298 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105936222-105936261
64251 chr14 105936237 105936237 1 + C T SKCM 105936255 + 105936235 105936275 41 ATCCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGGAT ATTCGGGGGGGCTCCCTGCCCCCAGTCAAGCGGCGGCGGAT < 41bp 1 0.573007436828342 1 0.154611527919769 experiment 0.853985126343316 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936255 chr14:105936237 synonymous SNV . 0 3 hm5C_associated_SNPs_33299 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105936222-105936261
64251 chr3 31674562 31674562 1 + C T SKCM 31674578 + 31674558 31674598 41 AGCACCTGATAACAGGGAGACATTAGATCACAAACCTCGAG AGCATCTGATAACAGGGAGACATTAGATCACAAACCTCGAG < 41bp 1 0.213969462967728 1 0.254114985466003 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STT3B ENSG00000163527 CDS Human protein_coding chr3:31674578 chr3:31674562 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_33301 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:31674540-31674580
64251 chr2 242683189 242683189 1 + C T SKCM 242683180 + 242683160 242683200 41 CAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCA CAACCAACGCTGGAGGCCTGCGGTTTCTTTGATATGGCTCA < 41bp 1 0.30321059354174 1 0.34381115436554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242683180 chr2:242683189 stopgain 0.081 1 30 hm5C_associated_SNPs_33302 0 0 2 PPIG POSTAR2 ENCODE chr2:242683182-242683232
64251 chr7 128494210 128494210 1 + G A SKCM 128494192 + 128494172 128494212 41 CCACCCAGGTCGGCGGGGACCCCTTCCCTGCTGTGTTTGGG CCACCCAGGTCGGCGGGGACCCCTTCCCTGCTGTGTTTAGG < 41bp 1 0.0400054721626803 1 0.05687016248703 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128494192 chr7:128494210 nonsynonymous SNV 0.996 3 39 hm5C_associated_SNPs_33304 0 0 5 AARS POSTAR2 ENCODE chr7:128494205-128494252
64251 chr7 128494210 128494210 1 + G A SKCM 128494193 + 128494173 128494213 41 CACCCAGGTCGGCGGGGACCCCTTCCCTGCTGTGTTTGGGG CACCCAGGTCGGCGGGGACCCCTTCCCTGCTGTGTTTAGGG < 41bp 1 0.0145189349450238 1 0.147827535867691 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128494193 chr7:128494210 nonsynonymous SNV 0.996 3 38 hm5C_associated_SNPs_33305 0 0 5 AARS POSTAR2 ENCODE chr7:128494205-128494252
64251 chr11 60704128 60704128 1 + C T SKCM 60704142 + 60704122 60704162 41 GGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC GGCCCTTCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC < 41bp 1 0.530338374423364 1 0.875518918037415 experiment 0.939323251153273 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704142 chr11:60704128 nonsynonymous SNV 0.001 0 7 hm5C_associated_SNPs_33306 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:60704083-60704129
64251 chr15 81199005 81199005 1 + G A SKCM 81199009 + 81198989 81199029 41 CCCTTTCTGCCCTAGGGAAACCAATGTACCTGCACATCGGG CCCTTTCTGCCCTAGGAAAACCAATGTACCTGCACATCGGG < 41bp 1 0.119144490480088 1 0.115868598222733 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81199009 chr15:81199005 synonymous SNV . 0 17 hm5C_associated_SNPs_33307 0 0 1 DDX6 POSTAR2 ENCODE chr15:81199003-81199016
64251 chrX 73046579 73046579 1 - C T SKCM 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCAAAAAAGGTATCTCAAGACTAACGGCCGGAAT < 41bp 1 0.678380056313535 1 0.677143096923828 experiment 0.643239887372929 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046579 . . 0 10 hm5C_associated_SNPs_33309 0 0 71 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046579 73046579 1 - C T SKCM 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGATAGAGGACCCAAGCAAAAAAGGTATCTCA < 41bp 1 0.093930753273782 1 0.176983952522278 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046579 . . 0 27 hm5C_associated_SNPs_33310 0 0 71 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr7 73944162 73944162 1 + C T SKCM 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATCTCCTTCAAGCGCCCCTGCACTT < 41bp 1 0.0319898347301342 1 0.500946223735809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944162 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_33311 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr21 38558073 38558073 1 + C T SKCM 38558059 + 38558039 38558079 41 AACATGAATTACATCTGGATCAGTCCCTTGAAATCAGGCAA AACATGAATTACATCTGGATCAGTCCCTTGAAATTAGGCAA < 41bp 1 0.0520533093996036 1 0.130006909370422 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38558059 chr21:38558073 synonymous SNV . 0 35 hm5C_associated_SNPs_33312 0 0 3 BUD13 POSTAR2 ENCODE chr21:38558044-38558076
64251 chr9 124062268 124062268 1 + G A SKCM 124062255 + 124062235 124062275 41 GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCG GGGGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGAGTGCCCG < 41bp 1 0.447971680653437 1 0.597301244735718 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062255 chr9:124062268 synonymous SNV . 0 34 hm5C_associated_SNPs_33313 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062268 124062268 1 + G A SKCM 124062257 + 124062237 124062277 41 GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAG GGGCGTCCCAGGCGGGGGCGCCCCAGGGGCGAGTGCCCGAG < 41bp 1 0.67634583294581 1 0.560533761978149 experiment 0.64730833410838 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062257 chr9:124062268 synonymous SNV . 0 32 hm5C_associated_SNPs_33314 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr9 124062268 124062268 1 + G A SKCM 124062258 + 124062238 124062278 41 GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGGGTGCCCGAGG GGCGTCCCAGGCGGGGGCGCCCCAGGGGCGAGTGCCCGAGG < 41bp 1 0.532389600312536 1 0.828202843666077 experiment 0.935220799374927 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSN ENSG00000148180 CDS Human protein_coding chr9:124062258 chr9:124062268 synonymous SNV . 0 31 hm5C_associated_SNPs_33315 0 0 5 DDX3X POSTAR2 ENCODE chr9:124062252-124062270
64251 chr19 19627027 19627027 1 + G A SKCM 19627040 + 19627020 19627060 41 GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA GGGACCGAAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA < 41bp 1 0.62868809002817 1 0.232524812221527 experiment 0.742623819943659 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19627040 chr19:19627027 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_33316 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr10 81109500 81109500 1 + C T SKCM 81109491 + 81109471 81109511 41 TCCACCTTCCACAGGGTGATCCCTTCCTTCATGTGCCAGGT TCCACCTTCCACAGGGTGATCCCTTCCTTTATGTGCCAGGT < 41bp 1 0.0744746422921442 1 0.177996039390564 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PPIF ENSG00000108179 CDS Human protein_coding chr10:81109491 chr10:81109500 synonymous SNV . 0 30 hm5C_associated_SNPs_33321 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:81109477-81109501
64251 chr11 118267090 118267090 1 + G A SKCM 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CCCCTCACCATGGACCAGATCCGGCCAAACACAAAACTAAA < 41bp 1 0.202728092497217 1 0.282431244850159 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267090 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_33322 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118267033-118267106
64251 chr19 48220214 48220214 1 + C T SKCM 48220221 + 48220201 48220241 41 GCAACGCCCTCGTCGTGGACCCGGACAAGCCCTTCCGCAAA GCAACGCCCTCGTTGTGGACCCGGACAAGCCCTTCCGCAAA < 41bp 1 0.548539598779449 1 0.3398617208004 experiment 0.902920802441101 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EHD2 ENSG00000024422 CDS Human protein_coding chr19:48220221 chr19:48220214 synonymous SNV . 0 14 hm5C_associated_SNPs_33323 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:48220201-48220223
64251 chr11 65267924 65267924 1 + C T SKCM 65267931 + 65267911 65267951 41 AGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGG AGCAGACAGGATTTCAGGAACCAGTGTTTGATGAAGCTAGG < 41bp 1 0.348393834458189 1 0.3803830742836 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267931 chr11:65267924 . . 0 14 hm5C_associated_SNPs_33324 0 0 82 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267924 65267924 1 + C T SKCM 65267932 + 65267912 65267952 41 GCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGA GCAGACAGGATTTCAGGAACCAGTGTTTGATGAAGCTAGGA < 41bp 1 0.666654639767472 1 0.338794708251953 experiment 0.666690720465057 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267932 chr11:65267924 . . 0 13 hm5C_associated_SNPs_33325 0 0 82 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr1 110596512 110596512 1 + C T SKCM 110596500 + 110596480 110596520 41 GTTAGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAG GTTAGAAAGGGAGGTCTTCTCCAAGCCCATTTTCTGGGAAG < 41bp 1 0.624811156371228 1 0.558976650238037 experiment 0.750377687257545 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110596500 chr1:110596512 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_33326 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:110596483-110596521
64251 chr4 30725910 30725910 1 + G A SKCM 30725920 + 30725900 30725940 41 CACTGTGGAGGCTTCTAAGCCAAATGGACAGAGGTATGATA CACTGTGGAGACTTCTAAGCCAAATGGACAGAGGTATGATA < 41bp 1 0.115990937499284 1 0.698840439319611 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725920 chr4:30725910 nonsynonymous SNV 0.999 1 11 hm5C_associated_SNPs_33328 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30725866-30725952
64251 chr20 10023937 10023937 1 + G A SKCM 10023948 + 10023928 10023968 41 ACATTTTTGGAAAAAGGAGCCAATCCTAATGCAATCAACTC ACATTTTTGAAAAAAGGAGCCAATCCTAATGCAATCAACTC < 41bp 1 0.0543212996590492 1 0.124373435974121 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10023948 chr20:10023937 nonsynonymous SNV 0.986 4 10 hm5C_associated_SNPs_33331 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:10023916-10023946
64251 chr5 38885518 38885518 1 + G A SKCM 38885507 + 38885487 38885527 41 CCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGG CCGAGGACTTCAAGACTTTGCACTGTACTTGAGATCCTGGG < 41bp 1 0.366451388429354 1 0.0783508121967316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OSMR ENSG00000145623 CDS Human protein_coding chr5:38885507 chr5:38885518 stopgain 0.983 1 32 hm5C_associated_SNPs_33332 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:38885500-38885520
64251 chr5 150639418 150639418 1 + G T SKCM 150639408 + 150639388 150639428 41 ACTCTGGAGCCTGACCCCATCATCGTTCCTGGAAATGTGAC ACTCTGGAGCCTGACCCCATCATCGTTCCTTGAAATGTGAC < 41bp 1 0.480263156318763 1 0.285964816808701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GM2A ENSG00000196743 CDS Human protein_coding chr5:150639408 chr5:150639418 stopgain 0.180 1 31 hm5C_associated_SNPs_33334 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:150639389-150639420
64251 chr16 2106223 2106223 1 + C T SKCM 2106203 + 2106183 2106223 41 GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCGTCCGGAC GGTGCTCCCTGCAGGATGATCTGTCTGCTGTGCGTCCGGAT < 41bp 1 0.240743587791694 1 0.176205277442932 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2106203 chr16:2106223 nonsynonymous SNV 0.240 5 41 hm5C_associated_SNPs_33335 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2106203-2106238
64251 chr7 100732020 100732020 1 + C T SKCM 100732032 + 100732012 100732052 41 GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC GCCCAGCCTAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC < 41bp 1 0.275830645602304 1 0.210716217756271 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732032 chr7:100732020 nonsynonymous SNV 0.575 2 9 hm5C_associated_SNPs_33336 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731995-100732033
64251 chr2 189458714 189458714 1 + C T SKCM 189458701 + 189458681 189458721 41 GGGACTAACTCTTGAAGGCACAGTATTTTGTCTCGACCCGT GGGACTAACTCTTGAAGGCACAGTATTTTGTCTTGACCCGT < 41bp 1 0.571912611817823 1 0.11098712682724 experiment 0.856174776364353 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458701 chr2:189458714 synonymous SNV . 0 34 hm5C_associated_SNPs_33340 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr17 48557331 48557331 1 + C T SKCM 48557327 + 48557307 48557347 41 CCTGGAGGCTGTGGCACAGGCAGCCCACCTGCCTGCAGACT CCTGGAGGCTGTGGCACAGGCAGCTCACCTGCCTGCAGACT < 41bp 1 0.56752408126913 1 0.308143734931946 experiment 0.86495183746174 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557327 chr17:48557331 synonymous SNV . 0 25 hm5C_associated_SNPs_33341 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48557329-48557353
64251 chr11 48134384 48134384 1 + C T SKCM 48134404 + 48134384 48134424 41 CTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAA TTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAA < 41bp 1 0.555312963125549 1 0.443437069654465 experiment 0.889374073748901 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48134404 chr11:48134384 synonymous SNV . 0 1 hm5C_associated_SNPs_33342 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:48134363-48134396
64251 chr7 2686504 2686504 1 + G A SKCM 2686507 + 2686487 2686527 41 GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCGC GCCCTGCTGCTCCTGGGAGCCGCCGCCCTGGCCTGCCTCGC < 41bp 1 0.642495904528371 1 0.887982368469238 experiment 0.715008190943259 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686507 chr7:2686504 synonymous SNV . 0 18 hm5C_associated_SNPs_33343 0 0 3 DDX3X POSTAR2 ENCODE chr7:2686485-2686540
64251 chr2 170592455 170592455 1 + G A SKCM 170592441 + 170592421 170592461 41 GATTCAGGGAGCAGAAATACCAGATTATACCAGGGAGAGCT GATTCAGGGAGCAGAAATACCAGATTATACCAGGAAGAGCT < 41bp 1 0.637298769636253 1 0.46435546875 experiment 0.725402460727495 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170592441 chr2:170592455 nonsynonymous SNV 0.999 1 35 hm5C_associated_SNPs_33345 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:170592446-170592477
64251 chr12 3149313 3149313 1 + G A SKCM 3149330 + 3149310 3149350 41 ACCGCATCCACCGGTCCCCGCTCTGTGAGTACATGATCAAC ACCACATCCACCGGTCCCCGCTCTGTGAGTACATGATCAAC < 41bp 1 0.153489797861288 1 0.277596265077591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3149330 chr12:3149313 nonsynonymous SNV 0.935 4 4 hm5C_associated_SNPs_33346 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:3149297-3149335
64251 chr1 183101638 183101638 1 + C T SKCM 183101623 + 183101603 183101643 41 ACAACCTGCTTCTGAGGACACTGGCAGGAGAAAATCAAACA ACAACCTGCTTCTGAGGACACTGGCAGGAGAAAATTAAACA < 41bp 1 0.234918550195939 1 0.212206065654755 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101623 chr1:183101638 stopgain 0.999 1 36 hm5C_associated_SNPs_33351 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chr1 183101638 183101638 1 + C T SKCM 183101642 + 183101622 183101662 41 ACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGC ACTGGCAGGAGAAAATTAAACAGCATTTGAGATTGAAGAGC < 41bp 1 0.761985460831742 1 0.464333593845367 experiment 0.476029078336516 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101642 chr1:183101638 stopgain 0.999 1 17 hm5C_associated_SNPs_33352 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chr1 183101638 183101638 1 + C T SKCM 183101645 + 183101625 183101665 41 GGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTA GGCAGGAGAAAATTAAACAGCATTTGAGATTGAAGAGCTTA < 41bp 1 0.0243740968102306 1 0.0459299981594086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101645 chr1:183101638 stopgain 0.999 1 14 hm5C_associated_SNPs_33353 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr1:183101618-183101639
64251 chrX 73043768 73043768 1 - C T SKCM 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG AGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG < 41bp 1 0.269188615211588 1 0.244154721498489 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043768 . . 0 1 hm5C_associated_SNPs_33355 0 0 70 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043768 73043768 1 - C T SKCM 73043778 - 73043758 73043798 41 AGATAGGAATGAACTATTGGCTTACTGAATGGTGATTACTT AGATAGGAATGAACTATTGGCTTACTGAATAGTGATTACTT < 41bp 1 0.0251117698001265 1 0.0590759515762329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043778 chrX:73043768 . . 0 31 hm5C_associated_SNPs_33356 0 0 70 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr22 44332976 44332976 1 + G A SKCM 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC CATCCTCAGAAGAGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.549702270969759 1 0.107577115297318 experiment 0.900595458060482 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332976 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_33357 0 0 3 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr17 1651929 1651929 1 + G A SKCM 1651935 + 1651915 1651955 41 CCGAGCCTTACCCAGAGAGACTCCTTCCACCTGGACGAGCA CCGAGCCTTACCCAAAGAGACTCCTTCCACCTGGACGAGCA < 41bp 1 0.26564010243655 1 0.196009486913681 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1651935 chr17:1651929 synonymous SNV . 0 15 hm5C_associated_SNPs_33358 0 0 2 PPIG POSTAR2 ENCODE chr17:1651911-1651996
64251 chr17 1651929 1651929 1 + G A SKCM 1651937 + 1651917 1651957 41 GAGCCTTACCCAGAGAGACTCCTTCCACCTGGACGAGCAGT GAGCCTTACCCAAAGAGACTCCTTCCACCTGGACGAGCAGT < 41bp 1 0.00559444201538811 1 0.127499580383301 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1651937 chr17:1651929 synonymous SNV . 0 13 hm5C_associated_SNPs_33359 0 0 2 PPIG POSTAR2 ENCODE chr17:1651911-1651996
64251 chr6 33652666 33652666 1 + G A SKCM 33652675 + 33652655 33652695 41 AAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCT AAGATCTTCCAAGAGAGCATCGGCCTGGCCATCCACCTGCT < 41bp 1 0.16951971840833 1 0.336635082960129 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652675 chr6:33652666 synonymous SNV . 0 12 hm5C_associated_SNPs_33365 0 0 2 GRWD1 POSTAR2 ENCODE chr6:33652645-33652702
64251 chr6 33652667 33652667 1 + G A SKCM 33652675 + 33652655 33652695 41 AAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCT AAGATCTTCCAGAAGAGCATCGGCCTGGCCATCCACCTGCT < 41bp 1 0.157654305367596 1 0.255205392837524 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652675 chr6:33652667 nonsynonymous SNV 0.998 2 13 hm5C_associated_SNPs_33366 0 0 2 GRWD1 POSTAR2 ENCODE chr6:33652645-33652702
64251 chr1 93998573 93998573 1 + C T SKCM 93998568 + 93998548 93998588 41 GAACGCAAAGTTATTCCCATCATTTCAAAATGTTTGGAAGG GAACGCAAAGTTATTCCCATCATTTTAAAATGTTTGGAAGG < 41bp 1 0.071520195671263 1 0.121656686067581 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:93998568 chr1:93998573 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_33367 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:93998557-93998579
64251 chr13 24823810 24823810 1 + C T SKCM 24823790 + 24823770 24823810 41 TCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACC TCCTGAAGACTCGGTTGCTGCAGACCCCCAGAAGGAAGACT < 41bp 1 0.126765370509651 1 0.363321930170059 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SPATA13 ENSG00000182957 CDS Human protein_coding chr13:24823790 chr13:24823810 nonsynonymous SNV 0.004 0 41 hm5C_associated_SNPs_33368 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:24823780-24823818
64251 chr2 32828126 32828126 1 + T G SKCM 32828127 + 32828107 32828147 41 GACCAGAAGAGAAGTGGAATCCTCAGACCTCAAGCTTTTTG GACCAGAAGAGAAGTGGAAGCCTCAGACCTCAAGCTTTTTG < 41bp 1 0.075299342909481 1 0.103388249874115 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32828127 chr2:32828126 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_33369 0 0 2 PRPF8 POSTAR2 ENCODE chr2:32828089-32828154
64251 chr13 27845173 27845173 1 + C T SKCM 27845190 + 27845170 27845210 41 TGGCGGTGCTGGGCGCCGGCCGCGTGGGCAAGAGCGGTGAG TGGTGGTGCTGGGCGCCGGCCGCGTGGGCAAGAGCGGTGAG < 41bp 1 0.79266573484656 1 0.527347266674042 experiment 0.41466853030688 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RASL11A ENSG00000122035 CDS Human protein_coding chr13:27845190 chr13:27845173 nonsynonymous SNV 0.761 1 4 hm5C_associated_SNPs_33372 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:27845171-27845197
64251 chr16 23700989 23700989 1 + T A SKCM 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACCTCAGCAACGGCAGCGTGCAGATCAACATCTTCCA < 41bp 1 0.179918235168229 1 0.172124326229095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700989 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_33373 0 0 4 GRWD1 POSTAR2 ENCODE chr16:23700956-23700994
64251 chr3 183855532 183855532 1 + C T SKCM 183855522 + 183855502 183855542 41 GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA GATGCCAAGGCTTTGGTGCGCTCTGACTTTTTTCTGGTGTA < 41bp 1 0.372199720459492 1 0.12225678563118 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183855522 chr3:183855532 nonsynonymous SNV 0.989 2 31 hm5C_associated_SNPs_33374 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:183855516-183855537
64251 chr7 36445848 36445848 1 + C T SKCM 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG TCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG < 41bp 1 0.577341333150811 1 0.328485488891602 experiment 0.845317333698378 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445848 synonymous SNV . 0 1 hm5C_associated_SNPs_33376 0 0 2 DDX24 POSTAR2 ENCODE chr7:36445823-36445858
64251 chr10 12191686 12191686 1 + A T SKCM 12191687 + 12191667 12191707 41 AATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT AATCATTGAAGTTGGAGATTCACCGAAAGATAGAGCTTTAT < 41bp 1 0.585274674608275 1 0.0524718761444092 experiment 0.82945065078345 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191687 chr10:12191686 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_33385 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:12191667-12191691
64251 chr11 57574420 57574420 1 + C T SKCM 57574432 + 57574412 57574452 41 AAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC AAACGATATAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC < 41bp 1 0.674291769185858 1 0.642877340316772 experiment 0.651416461628284 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57574432 chr11:57574420 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_33386 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:57574416-57574438
64251 chr1 155279924 155279924 1 + G A SKCM 155279915 + 155279895 155279935 41 AAGCAGGATTTCGTTCAGCACTTCTCCCAGATCGTTAGGGT AAGCAGGATTTCGTTCAGCACTTCTCCCAAATCGTTAGGGT < 41bp 1 0.146610609688575 1 0.116032689809799 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279915 chr1:155279924 synonymous SNV . 0 30 hm5C_associated_SNPs_33387 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:155279853-155279925
64251 chr22 38201945 38201945 1 + A G SKCM 38201937 + 38201917 38201957 41 GGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCA GGCATCCAAGCCCAAGAAGGCTGCCTCCGAAGCCCCAACCA < 41bp 1 0.436513046924956 1 0.179684817790985 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201937 chr22:38201945 nonsynonymous SNV 0.988 3 29 hm5C_associated_SNPs_33388 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38201939-38201983
64251 chr1 161134339 161134339 1 + C T SKCM 161134359 + 161134339 161134379 41 CGGCAGAAAACTCGAAGTACCAAAAAGTTGACAGTACAAAG TGGCAGAAAACTCGAAGTACCAAAAAGTTGACAGTACAAAG < 41bp 1 0.450161267443557 1 0.466075599193573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161134359 chr1:161134339 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_33391 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:161134319-161134348
64251 chr2 105959566 105959566 1 + C T SKCM 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGATTTAACGCATAGGAAAAGTCCTTCAGGC < 41bp 1 0.471371208763425 1 0.471932142972946 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959566 synonymous SNV . 0 14 hm5C_associated_SNPs_33392 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:105959539-105959577
64251 chr3 17056253 17056253 1 + C T SKCM 17056251 + 17056231 17056271 41 GCCTCTCCTCTGTGGCCAATCTCATGCAGTGCATGTTGGCG GCCTCTCCTCTGTGGCCAATCTTATGCAGTGCATGTTGGCG < 41bp 1 0.257009343995209 1 0.0627868175506592 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056251 chr3:17056253 synonymous SNV . 0 23 hm5C_associated_SNPs_33393 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:17056231-17056265
64251 chr22 26291128 26291128 1 + G A SKCM 26291140 + 26291120 26291160 41 CAGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATG CAGCAGACAAGTGGCAGATGCGCTTCGACTGTGCTCAGATG < 41bp 1 0.0735904891988738 1 0.258588135242462 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26291140 chr22:26291128 nonsynonymous SNV 0.871 1 9 hm5C_associated_SNPs_33394 0 0 1 ZNF622 POSTAR2 ENCODE chr22:26291123-26291170
64251 chr19 41239111 41239111 1 + C A SKCM 41239094 + 41239074 41239114 41 GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTCCCC GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTACCC < 41bp 1 0.782230532788311 1 0.788034915924072 experiment 0.435538934423377 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239094 chr19:41239111 nonsynonymous SNV 0.797 3 38 hm5C_associated_SNPs_33396 0 0 1 PPIG POSTAR2 ENCODE chr19:41239058-41239174
64251 chr16 66998560 66998560 1 + G A SKCM 66998564 + 66998544 66998584 41 GCAGGGCTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT GCAGGGCTGTTCCACAAAGCCATCACACAGAGTGGGGTCAT < 41bp 1 0.500314834289208 1 0.102067887783051 experiment 0.999370331421583 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66998564 chr16:66998560 nonsynonymous SNV 0.842 3 17 hm5C_associated_SNPs_33397 0 0 1 PPIG POSTAR2 ENCODE chr16:66998524-66998563
64251 chr18 13067897 13067897 1 + C T SKCM 13067893 + 13067873 13067913 41 CTTATGGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAAC CTTATGGAGGCTGGAAAGCCCTCCTACTAAAATTGATAAAC < 41bp 1 0.367991694764351 1 0.611255347728729 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13067893 chr18:13067897 nonsynonymous SNV 0.711 4 25 hm5C_associated_SNPs_33398 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13067872-13067900
64251 chr8 61757450 61757450 1 + C T SKCM 61757430 + 61757410 61757450 41 ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCC ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCT < 41bp 1 0.160241917263428 1 0.446274638175964 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757430 chr8:61757450 synonymous SNV . 0 41 hm5C_associated_SNPs_33400 0 0 5 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr8:61757437-61757458
64251 chr10 71154787 71154787 1 + C T SKCM 71154804 + 71154784 71154824 41 CCTCTTCCGAGGGCAGATCTCTGAGACGCTGAAGACCCGGG CCTTTTCCGAGGGCAGATCTCTGAGACGCTGAAGACCCGGG < 41bp 1 0.708436431907966 1 0.675412774085999 experiment 0.583127136184068 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71154804 chr10:71154787 synonymous SNV . 0 4 hm5C_associated_SNPs_33401 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:71154760-71154792
64251 chr3 186504002 186504002 1 + G A SKCM 186504005 + 186503985 186504025 41 GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATCAAAT GAAGCAGATGAAATGTTAAGCCGTGGTTTTAAGGATCAAAT < 41bp 1 0.216505381545031 1 0.192969530820847 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504005 chr3:186504002 synonymous SNV . 0 18 hm5C_associated_SNPs_33402 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186503960-186504024
64251 chr19 41239112 41239112 1 + C T SKCM 41239094 + 41239074 41239114 41 GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTCCCC GGAAGAGGAGCTAGTGAAGGCACGGGAACGTCCCCGTCTCC < 41bp 1 0.770245670604955 1 0.808062076568604 experiment 0.459508658790089 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239094 chr19:41239112 nonsynonymous SNV 0.878 1 39 hm5C_associated_SNPs_33403 0 0 1 PPIG POSTAR2 ENCODE chr19:41239058-41239174
64251 chr7 4823016 4823016 1 + G A SKCM 4823023 + 4823003 4823043 41 GAGCCGGCAGCCTGAGGGACCCAGCCTCAGACACCTCCTCC GAGCCGGCAGCCTAAGGGACCCAGCCTCAGACACCTCCTCC < 41bp 1 0.142544765538688 1 0.279207646846771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823023 chr7:4823016 nonsynonymous SNV 0.980 4 14 hm5C_associated_SNPs_33404 0 0 2 PPIG POSTAR2 ENCODE chr7:4822977-4823030
64251 chr7 150769149 150769149 1 + C T SKCM 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCTGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT < 41bp 1 0.0674690787139932 1 0.0291681289672852 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769149 nonsynonymous SNV 0.997 5 4 hm5C_associated_SNPs_33405 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chrX 73040652 73040652 1 - C T SKCM 73040659 - 73040639 73040679 41 AAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATCT AAGACTCTTGAACTTGTGAACTGATGTAAAATGCAGAATCT < 41bp 1 0.1449691026528 1 0.126073569059372 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040659 chrX:73040652 . . 0 28 hm5C_associated_SNPs_33407 0 0 70 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chrX 73040652 73040652 1 - C T SKCM 73040667 - 73040647 73040687 41 ATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAATG ATAAATGGAAGACTCTTGAACTTGTGAACTGATGTAAAATG < 41bp 1 0.0870750873895255 1 0.0433703064918518 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040667 chrX:73040652 . . 0 36 hm5C_associated_SNPs_33408 0 0 70 WDR33 POSTAR2 GSE61123,GSM1496985 chrX:73040420-73040860
64251 chr4 77661150 77661150 1 + T G SKCM 77661164 + 77661144 77661184 41 TCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTT TCAGGCGCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTT < 41bp 1 0.63328442580411 1 0.92111349105835 experiment 0.733431148391781 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661164 chr4:77661150 synonymous SNV . 0 7 hm5C_associated_SNPs_33409 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661137-77661160
64251 chr19 38573337 38573337 1 + G A SKCM 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC CGCCACCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC < 41bp 1 0.0766893662083487 1 0.0954621136188507 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573337 nonsynonymous SNV 0.128 0 5 hm5C_associated_SNPs_33410 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chrX 12838868 12838868 1 + C T SKCM 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCGCCTTTGAGGCTGTTGTTGTCACAAACACAA < 41bp 1 0.298945895621051 1 0.0761541128158569 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838868 synonymous SNV . 0 28 hm5C_associated_SNPs_33411 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:12838856-12838892
64251 chr20 61449889 61449889 1 + G A SKCM 61449900 + 61449880 61449920 41 GTCCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGC GTCCTCCAGATCTGCCTGGGCCCCCGGTGAGTGTCCCTGGC < 41bp 1 0.105608651351608 1 0.0965258777141571 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449900 chr20:61449889 nonsynonymous SNV 0.953 4 10 hm5C_associated_SNPs_33412 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449889 61449889 1 + G A SKCM 61449901 + 61449881 61449921 41 TCCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCT TCCTCCAGATCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCT < 41bp 1 0.214220364529363 1 0.233188092708588 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449901 chr20:61449889 nonsynonymous SNV 0.953 4 9 hm5C_associated_SNPs_33413 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449889 61449889 1 + G A SKCM 61449902 + 61449882 61449922 41 CCTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTG CCTCCAGATCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTG < 41bp 1 0.513432158079064 1 0.552123069763184 experiment 0.973135683841871 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449902 chr20:61449889 nonsynonymous SNV 0.953 4 8 hm5C_associated_SNPs_33414 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449889 61449889 1 + G A SKCM 61449903 + 61449883 61449923 41 CTCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGG CTCCAGATCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGG < 41bp 1 0.332368259411976 1 0.720963776111603 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449903 chr20:61449889 nonsynonymous SNV 0.953 4 7 hm5C_associated_SNPs_33415 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr20 61449889 61449889 1 + G A SKCM 61449904 + 61449884 61449924 41 TCCAGGTCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGGG TCCAGATCTGCCTGGGCCCCCGGTGAGTGTCCCTGGCTGGG < 41bp 1 0.313380558052495 1 0.639410734176636 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449904 chr20:61449889 nonsynonymous SNV 0.953 4 6 hm5C_associated_SNPs_33416 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chrX 152954135 152954135 1 + G A SKCM 152954118 + 152954098 152954138 41 CGCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCC CGCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACAGCC < 41bp 1 0.337674446381324 1 0.253291845321655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954118 chrX:152954135 nonsynonymous SNV 0.606 0 38 hm5C_associated_SNPs_33417 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152954132-152954152
64251 chrX 152954135 152954135 1 + G A SKCM 152954119 + 152954099 152954139 41 GCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACGGCCC GCGCCCGGGCCCGACGGGGCCCCGGCCAAGGGCGACAGCCC < 41bp 1 0.575765967974563 1 0.409838140010834 experiment 0.848468064050873 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152954119 chrX:152954135 nonsynonymous SNV 0.606 0 37 hm5C_associated_SNPs_33418 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152954132-152954152
64251 chr18 77474843 77474843 1 + C T SKCM 77474860 + 77474840 77474880 41 CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT CAGTAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT < 41bp 1 0.600080810630624 1 0.204707324504852 experiment 0.799838378738753 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474860 chr18:77474843 synonymous SNV . 0 4 hm5C_associated_SNPs_33419 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr18:77474843-77474844
64251 chr1 46872007 46872007 1 + C T SKCM 46871992 + 46871972 46872012 41 CGAGCCCTGCTGTGTGAGGACATGTTCCGCTTGGACCCCAC CGAGCCCTGCTGTGTGAGGACATGTTCCGCTTGGATCCCAC < 41bp 1 0.3469845270697 1 0.0752736032009125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAAH ENSG00000117480 CDS Human protein_coding chr1:46871992 chr1:46872007 synonymous SNV . 0 36 hm5C_associated_SNPs_33422 0 0 1 PPIG POSTAR2 ENCODE chr1:46872005-46872033
64251 chr3 32483433 32483433 1 + G A SKCM 32483437 + 32483417 32483457 41 TTTGCGACTTGATAATGATCCTCGCCTTTTACCTGGTCCAC TTTGCGACTTGATAATAATCCTCGCCTTTTACCTGGTCCAC < 41bp 1 0.549572182612623 1 0.0896487534046173 experiment 0.900855634774753 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483437 chr3:32483433 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_33424 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:32483429-32483467
64251 chr13 27216450 27216450 1 + C A SKCM 27216436 + 27216416 27216456 41 AGTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAG AGTGAAGAGGAACATTGAGCCCCGGCACTTGTGCAGGGGAG < 41bp 1 0.451939909606462 1 0.33665457367897 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216436 chr13:27216450 synonymous SNV . 0 35 hm5C_associated_SNPs_33426 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216450 27216450 1 + C A SKCM 27216437 + 27216417 27216457 41 GTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGC GTGAAGAGGAACATTGAGCCCCGGCACTTGTGCAGGGGAGC < 41bp 1 0.182237788345479 1 0.689877390861511 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216437 chr13:27216450 synonymous SNV . 0 34 hm5C_associated_SNPs_33427 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216450 27216450 1 + C A SKCM 27216438 + 27216418 27216458 41 TGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCT TGAAGAGGAACATTGAGCCCCGGCACTTGTGCAGGGGAGCT < 41bp 1 0.542689864049968 1 0.440671294927597 experiment 0.914620271900064 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216438 chr13:27216450 synonymous SNV . 0 33 hm5C_associated_SNPs_33428 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216450 27216450 1 + C A SKCM 27216441 + 27216421 27216461 41 AGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCTCTG AGAGGAACATTGAGCCCCGGCACTTGTGCAGGGGAGCTCTG < 41bp 1 0.210688589538552 1 0.0877862870693207 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216441 chr13:27216450 synonymous SNV . 0 30 hm5C_associated_SNPs_33429 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr2 54858619 54858619 1 + G A SKCM 54858614 + 54858594 54858634 41 ACATGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGA ACATGTTTCTGCGGCAGCGGCTGCAAGCCCTGGACACTGGA < 41bp 1 0.579319210001576 1 0.598292827606201 experiment 0.841361579996849 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858614 chr2:54858619 synonymous SNV . 0 26 hm5C_associated_SNPs_33430 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858619 54858619 1 + G A SKCM 54858617 + 54858597 54858637 41 TGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGG TGTTTCTGCGGCAGCGGCTGCAAGCCCTGGACACTGGATGG < 41bp 1 0.213940278135748 1 0.449246346950531 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858617 chr2:54858619 synonymous SNV . 0 23 hm5C_associated_SNPs_33431 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858619 54858619 1 + G A SKCM 54858621 + 54858601 54858641 41 TCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGGAACG TCTGCGGCAGCGGCTGCAAGCCCTGGACACTGGATGGAACG < 41bp 1 0.214217470023055 1 0.220507383346558 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858621 chr2:54858619 synonymous SNV . 0 19 hm5C_associated_SNPs_33432 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858619 54858619 1 + G A SKCM 54858628 + 54858608 54858648 41 CAGCGGCTGCAGGCCCTGGACACTGGATGGAACGAGCTCCA CAGCGGCTGCAAGCCCTGGACACTGGATGGAACGAGCTCCA < 41bp 1 0.32781397213277 1 0.267641544342041 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858628 chr2:54858619 synonymous SNV . 0 12 hm5C_associated_SNPs_33433 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr14 37739697 37739697 1 + G A SKCM 37739679 + 37739659 37739699 41 AGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA AGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAAAA < 41bp 1 0.637091404681531 1 0.52031135559082 experiment 0.725817190636938 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37739679 chr14:37739697 nonsynonymous SNV 0.989 0 39 hm5C_associated_SNPs_33436 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:37739668-37739703
64251 chr19 3119228 3119228 1 + C T SKCM 3119221 + 3119201 3119241 41 CAGAACCGGATGGAGGAGAGCAAAGCCCTGTTCCGGACCAT CAGAACCGGATGGAGGAGAGCAAAGCCTTGTTCCGGACCAT < 41bp 1 0.286356966006671 1 0.435345113277435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119221 chr19:3119228 synonymous SNV . 0 28 hm5C_associated_SNPs_33438 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:3119208-3119246
64251 chrX 73040921 73040921 1 - C A SKCM 73040931 - 73040911 73040951 41 AGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGATTA AGTAACACCCCTTTCTTCAGCTGGGGATGGTGAATGGATTA < 41bp 1 0.586457551029373 1 0.704526007175446 experiment 0.827084897941253 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040931 chrX:73040921 . . 0 31 hm5C_associated_SNPs_33440 0 0 45 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:73040433-73040993
64251 chrX 73040921 73040921 1 - C A SKCM 73040934 - 73040914 73040954 41 CTCAGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGA CTCAGTAACACCCCTTTCTTCAGCTGGGGATGGTGAATGGA < 41bp 1 0.258718859100613 1 0.211018174886703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040934 chrX:73040921 . . 0 34 hm5C_associated_SNPs_33441 0 0 45 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:73040433-73040993
64251 chr10 75529378 75529378 1 + C T SKCM 75529387 + 75529367 75529407 41 ATCCAGCATATCGGGGAGTCCTGAATAGCCCTGTGAAGGCT ATCCAGCATATTGGGGAGTCCTGAATAGCCCTGTGAAGGCT < 41bp 1 0.731385506840385 1 0.745292663574219 experiment 0.53722898631923 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529387 chr10:75529378 nonsynonymous SNV 0.996 2 12 hm5C_associated_SNPs_33442 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529374-75529394
64251 chr7 55259426 55259426 1 + G A SKCM 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTAGAGGACCGTCGCTTGGTGCACCGCGA < 41bp 1 0.075492796139961 1 0.243246734142303 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259426 synonymous SNV . 0 15 hm5C_associated_SNPs_33444 1 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr16 57254647 57254647 1 + T C SKCM 57254661 + 57254641 57254681 41 CAGTTTTAAAAGAAGGTAGACAGCTGACCTATGAGAAAGTG CAGTTTCAAAAGAAGGTAGACAGCTGACCTATGAGAAAGTG < 41bp 1 0.308226441611316 1 0.44626447558403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57254661 chr16:57254647 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_33445 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:57254647-57254702
64251 chr6 110533353 110533353 1 + T C SKCM 110533371 + 110533351 110533391 41 ACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTT ACCATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTT < 41bp 1 0.720187352930937 1 0.576566576957703 experiment 0.559625294138126 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC40 ENSG00000168438 CDS Human protein_coding chr6:110533371 chr6:110533353 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_33446 0 0 3 GRWD1 POSTAR2 ENCODE chr6:110533333-110533450
64251 chr7 5643510 5643510 1 + C T SKCM 5643505 + 5643485 5643525 41 CTGGGACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATC CTGGGACAGGGGACTCAGAGCTCTTTCTCATGAAGCTCATC < 41bp 1 0.153747128122535 1 0.161102563142776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643505 chr7:5643510 synonymous SNV . 0 26 hm5C_associated_SNPs_33447 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chr8 98657030 98657030 1 + C T SKCM 98657015 + 98656995 98657035 41 CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCG CAAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGTCCCCG < 41bp 1 0.507213937784835 1 0.457345247268677 experiment 0.985572124430329 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657015 chr8:98657030 nonsynonymous SNV 0.011 0 36 hm5C_associated_SNPs_33448 0 0 4 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr8 98657030 98657030 1 + C T SKCM 98657016 + 98656996 98657036 41 AAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGCCCCCGA AAGCGGGAGGAGGCGGCGGCCGTGCCGGCCGCGGTCCCCGA < 41bp 1 0.763210277144228 1 0.824027061462402 experiment 0.473579445711544 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657016 chr8:98657030 nonsynonymous SNV 0.011 0 35 hm5C_associated_SNPs_33449 0 0 4 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr8 98657030 98657030 1 + C T SKCM 98657027 + 98657007 98657047 41 GGCGGCGGCCGTGCCGGCCGCGGCCCCCGACGACCTGGCCT GGCGGCGGCCGTGCCGGCCGCGGTCCCCGACGACCTGGCCT < 41bp 1 0.605606804054533 1 0.667428374290466 experiment 0.788786391890934 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98657027 chr8:98657030 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_33450 0 0 4 EIF3H POSTAR2 ENCODE chr8:98657024-98657110
64251 chr1 155028619 155028619 1 + C T SKCM 155028630 + 155028610 155028650 41 CAGCGTGACCTGGTGGAGATCAGCCCAAACCCAGCTGTCAC CAGCGTGACTTGGTGGAGATCAGCCCAAACCCAGCTGTCAC < 41bp 1 0.573378163232893 1 0.706009924411774 experiment 0.853243673534215 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155028630 chr1:155028619 synonymous SNV . 0 10 hm5C_associated_SNPs_33451 0 0 1 FXR2 POSTAR2 ENCODE chr1:155028586-155028639
64251 chr9 71842716 71842716 1 + C T SKCM 71842734 + 71842714 71842754 41 CTCCAGAGGAGAGACGTCATCAGTATTCTGATTATGATTAT CTTCAGAGGAGAGACGTCATCAGTATTCTGATTATGATTAT < 41bp 1 0.646010645709345 1 0.371872782707214 experiment 0.707978708581311 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71842734 chr9:71842716 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_33453 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:71842707-71842730
64251 chr3 58112447 58112447 1 + G A SKCM 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTCGCACCGGGGAATTACGATGTTA < 41bp 1 0.438851602434311 1 0.0843372941017151 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112447 nonsynonymous SNV 0.966 2 29 hm5C_associated_SNPs_33454 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112447 58112447 1 + G A SKCM 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTCGCACCGGGGAATTACGATGTTAAT < 41bp 1 0.193858398250084 1 0.329795718193054 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112447 nonsynonymous SNV 0.966 2 27 hm5C_associated_SNPs_33455 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112447 58112447 1 + G A SKCM 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTCGCACCGGGGAATTACGATGTTAATA < 41bp 1 0.381531526812465 1 0.874459862709045 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112447 nonsynonymous SNV 0.966 2 26 hm5C_associated_SNPs_33456 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr12 57600306 57600306 1 + C T SKCM 57600323 + 57600303 57600343 41 AGCCTGTTCCCCGGCCACCCCCATTCGGCTTACGAGCAGGC AGCTTGTTCCCCGGCCACCCCCATTCGGCTTACGAGCAGGC < 41bp 1 0.0166511387567145 1 0.111043572425842 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57600323 chr12:57600306 synonymous SNV . 0 4 hm5C_associated_SNPs_33457 0 0 1 RPS3 POSTAR2 ENCODE chr12:57600288-57600307
64251 chr15 40259715 40259715 1 + C T SKCM 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCTATCCCTGTGCATCAGCTTCGCAGGTACACAGCT < 41bp 1 0.342793150242294 1 0.471645057201385 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259715 synonymous SNV . 0 8 hm5C_associated_SNPs_33458 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40259700-40259740
64251 chr22 42262864 42262864 1 + G C SKCM 42262872 + 42262852 42262892 41 AGTAATCAAGTGGGAGAGTTCCCTGACTTGTTTTCAGAACA AGTAATCAAGTGCGAGAGTTCCCTGACTTGTTTTCAGAACA < 41bp 1 0.0739154388945082 1 0.337266564369202 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42262872 chr22:42262864 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_33461 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:42262836-42262866
64251 chr15 40259718 40259718 1 + C T SKCM 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCCATTCCTGTGCATCAGCTTCGCAGGTACACAGCT < 41bp 1 0.318786344534884 1 0.414187610149384 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259718 synonymous SNV . 0 11 hm5C_associated_SNPs_33462 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40259700-40259740
64251 chr8 104343684 104343684 1 + C T SKCM 104343665 + 104343645 104343685 41 CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCC CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACTC < 41bp 1 0.54043497358213 1 0.0437003970146179 experiment 0.91913005283574 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343665 chr8:104343684 nonsynonymous SNV 0.267 0 40 hm5C_associated_SNPs_33465 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr2 86360313 86360313 1 + C T SKCM 86360303 + 86360283 86360323 41 TTTTTGCCTTCATCACAGTTCCAAGTTCTTCGATTTGATTT TTTTTGCCTTCATCACAGTTCCAAGTTCTTTGATTTGATTT < 41bp 1 0.0792890300817248 1 0.068117618560791 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360303 chr2:86360313 synonymous SNV . 0 31 hm5C_associated_SNPs_33466 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:86360304-86360316
64251 chr14 104124113 104124113 1 + C T SKCM 104124107 + 104124087 104124127 41 AAATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGT AAATATGATGACGACATTTCCCCATCTGTGAGTGGCTCTGT < 41bp 1 0.13997720835143 1 0.196434140205383 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124107 chr14:104124113 synonymous SNV . 0 27 hm5C_associated_SNPs_33467 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:104124109-104124130
64251 chr14 104124113 104124113 1 + C T SKCM 104124108 + 104124088 104124128 41 AATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTA AATATGATGACGACATTTCCCCATCTGTGAGTGGCTCTGTA < 41bp 1 0.0563167178923948 1 0.160497933626175 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124108 chr14:104124113 synonymous SNV . 0 26 hm5C_associated_SNPs_33468 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:104124109-104124130
64251 chr14 104124113 104124113 1 + C T SKCM 104124112 + 104124092 104124132 41 TGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTAGCAA TGATGACGACATTTCCCCATCTGTGAGTGGCTCTGTAGCAA < 41bp 1 0.332079554799455 1 0.159609407186508 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124112 chr14:104124113 synonymous SNV . 0 22 hm5C_associated_SNPs_33469 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:104124109-104124130
64251 chr15 69714755 69714755 1 + C T SKCM 69714749 + 69714729 69714769 41 GTCAGAAAAGAGAAGCTATGCCCAATCCAAAGACTTCTTCT GTCAGAAAAGAGAAGCTATGCCCAATTCAAAGACTTCTTCT < 41bp 1 0.54138800453636 1 0.117835640907288 experiment 0.91722399092728 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69714749 chr15:69714755 nonsynonymous SNV 0.914 1 27 hm5C_associated_SNPs_33470 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:69714691-69714756
64251 chr19 40884017 40884017 1 + C T SKCM 40884016 + 40883996 40884036 41 TTTCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG TTTCCTGAGGGACTGGGACTCTCCTTACAGCCATGACCTTG < 41bp 1 0.697431237009844 1 0.458533525466919 experiment 0.605137525980312 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884016 chr19:40884017 synonymous SNV . 0 22 hm5C_associated_SNPs_33471 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:40883994-40884019
64251 chr19 40884017 40884017 1 + C T SKCM 40884018 + 40883998 40884038 41 TCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC TCCTGAGGGACTGGGACTCTCCTTACAGCCATGACCTTGAC < 41bp 1 0.331559756413121 1 0.140905261039734 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884018 chr19:40884017 synonymous SNV . 0 20 hm5C_associated_SNPs_33472 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:40883994-40884019
64251 chr6 24423265 24423265 1 + C T SKCM 24423252 + 24423232 24423272 41 TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCCATTGCCT TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCTATTGCCT < 41bp 1 0.470769500236495 1 0.0627591907978058 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423252 chr6:24423265 nonsynonymous SNV 0.729 3 34 hm5C_associated_SNPs_33489 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:24423234-24423265
64251 chr7 106797452 106797452 1 + C T SKCM 106797463 + 106797443 106797483 41 TTCTTTTTTCATTGTAGAATCTGGAGAAGTGAAAATTACTA TTCTTTTTTTATTGTAGAATCTGGAGAAGTGAAAATTACTA < 41bp 1 0.778646909459647 1 0.729537129402161 experiment 0.442706181080706 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106797463 chr7:106797452 synonymous SNV . 0 10 hm5C_associated_SNPs_33490 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:106797432-106797456
64251 chr6 31928246 31928246 1 + C T SKCM 31928230 + 31928210 31928250 41 TCTTGCTGGAGAACACAAATCTCTCGGCTACAACCTCCTTG TCTTGCTGGAGAACACAAATCTCTCGGCTACAACCTTCTTG < 41bp 1 0.311251112631504 1 0.126180171966553 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31928230 chr6:31928246 nonsynonymous SNV 0.984 4 37 hm5C_associated_SNPs_33491 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221667 chr6:31928240-31928260
64251 chr22 18570761 18570761 1 + C T SKCM 18570741 + 18570721 18570761 41 CTCCCTCTGCCCTGCAGCTTCCCCTTCCTCCCTGCACTTCC CTCCCTCTGCCCTGCAGCTTCCCCTTCCTCCCTGCACTTCT < 41bp 1 0.178349933416757 1 0.0340075790882111 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PEX26 ENSG00000215193 CDS Human protein_coding chr22:18570741 chr22:18570761 nonsynonymous SNV 0.974 2 41 hm5C_associated_SNPs_33495 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:18570737-18570768
64251 chr22 29678492 29678492 1 + C G SKCM 29678503 + 29678483 29678523 41 CCCAGGTACCTGGGAGCTACCCCATGCAGCCAGTCACTGCA CCCAGGTACGTGGGAGCTACCCCATGCAGCCAGTCACTGCA < 41bp 1 0.411487189483985 1 0.417688965797424 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29678503 chr22:29678492 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_33496 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:29678480-29678500
64251 chr6 7579664 7579664 1 + G A SKCM 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGAAGCTGAAGA < 41bp 1 0.282508457997094 1 0.334140181541443 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579664 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_33497 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:7579660-7579680
64251 chr19 48254252 48254252 1 + C T SKCM 48254264 + 48254244 48254284 41 GAGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCT GAGCTGCCTCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCT < 41bp 1 0.78988310648004 1 0.953764736652374 experiment 0.42023378703992 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254264 chr19:48254252 synonymous SNV . 0 9 hm5C_associated_SNPs_33498 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48254252-48254253
64251 chr19 48254252 48254252 1 + C T SKCM 48254270 + 48254250 48254290 41 CCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCC CCTCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCC < 41bp 1 0.628312821862064 1 0.406654566526413 experiment 0.743374356275873 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254270 chr19:48254252 synonymous SNV . 0 3 hm5C_associated_SNPs_33499 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48254252-48254253
64251 chrX 73040680 73040680 1 - C T SKCM 73040667 - 73040647 73040687 41 ATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAATG ATAAATGAAAGACTCTTGAACTTGTGAACTGATGTGAAATG < 41bp 1 0.086442787231144 1 0.0445093214511871 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040667 chrX:73040680 . . 0 8 hm5C_associated_SNPs_33500 0 0 70 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chrX 73040680 73040680 1 - C T SKCM 73040673 - 73040653 73040693 41 GCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGATGT GCTAAGATAAATGAAAGACTCTTGAACTTGTGAACTGATGT < 41bp 1 0.282926647804644 1 0.574378848075867 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040673 chrX:73040680 . . 0 14 hm5C_associated_SNPs_33501 0 0 70 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chrX 73040680 73040680 1 - C T SKCM 73040675 - 73040655 73040695 41 AAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGAT AAGCTAAGATAAATGAAAGACTCTTGAACTTGTGAACTGAT < 41bp 1 0.0652967153062086 1 0.173746675252914 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040675 chrX:73040680 . . 0 16 hm5C_associated_SNPs_33502 0 0 70 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chr2 27900715 27900715 1 + G A SKCM 27900703 + 27900683 27900723 41 TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAGG TGTCCCGGAAGAAACTTCACCTGAGAACTTTTAAACTGAGG < 41bp 1 0.252218761035658 1 0.304866790771484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900703 chr2:27900715 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_33504 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27900681-27900730
64251 chr1 11807497 11807497 1 + G A SKCM 11807514 + 11807494 11807534 41 CAGGGGCTGCATTGTATTCTCAGGCTCCTATGCCTGGGCCA CAGAGGCTGCATTGTATTCTCAGGCTCCTATGCCTGGGCCA < 41bp 1 0.749019964923077 1 0.427184283733368 experiment 0.501960070153845 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11807514 chr1:11807497 stopgain 0.798 3 4 hm5C_associated_SNPs_33505 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:11807496-11807519
64251 chr1 36645654 36645654 1 + C T SKCM 36645659 + 36645639 36645679 41 AAGCTGTGGTGCAGTCCCCGCAGGTCACAGGTAGATCTCCT AAGCTGTGGTGCAGTTCCCGCAGGTCACAGGTAGATCTCCT < 41bp 1 0.374530350462306 1 0.91326630115509 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP7D1 ENSG00000116871 CDS Human protein_coding chr1:36645659 chr1:36645654 nonsynonymous SNV 0.974 3 16 hm5C_associated_SNPs_33506 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:36645637-36645661
64251 chr16 30976345 30976345 1 + C T SKCM 30976360 + 30976340 30976380 41 GGCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAA GGCCTTCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAA < 41bp 1 0.0872493770732798 1 0.0714300274848938 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976360 chr16:30976345 nonsynonymous SNV 0.998 3 6 hm5C_associated_SNPs_33507 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976327-30976362
64251 chr16 30976345 30976345 1 + C T SKCM 30976361 + 30976341 30976381 41 GCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAAC GCCTTCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAAC < 41bp 1 0.172401832327021 1 0.028911292552948 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976361 chr16:30976345 nonsynonymous SNV 0.998 3 5 hm5C_associated_SNPs_33508 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976327-30976362
64251 chr16 30976345 30976345 1 + C T SKCM 30976363 + 30976343 30976383 41 CTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCT CTTCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCT < 41bp 1 0.1478639863214 1 0.065513551235199 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976363 chr16:30976345 nonsynonymous SNV 0.998 3 3 hm5C_associated_SNPs_33509 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976327-30976362
64251 chr16 30976345 30976345 1 + C T SKCM 30976364 + 30976344 30976384 41 TCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTG TTCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTG < 41bp 1 0.304730519830529 1 0.337245434522629 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976364 chr16:30976345 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_33510 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976327-30976362
64251 chr16 30976345 30976345 1 + C T SKCM 30976365 + 30976345 30976385 41 CCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGG TCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGG < 41bp 1 0.436144718146236 1 0.483282864093781 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976365 chr16:30976345 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_33511 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976327-30976362
64251 chr2 238976788 238976788 1 + C T SKCM 238976802 + 238976782 238976822 41 AATCTTCACTTCCGGGGGCACTGAGGTAAAGCTTCTGAACA AATCTTTACTTCCGGGGGCACTGAGGTAAAGCTTCTGAACA < 41bp 1 0.363037884283674 1 0.358593165874481 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCLY ENSG00000132330 CDS Human protein_coding chr2:238976802 chr2:238976788 synonymous SNV . 0 7 hm5C_associated_SNPs_33512 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238976777-238976804
64251 chr1 10689629 10689629 1 + C T SKCM 10689614 + 10689594 10689634 41 GTTCCCTCCATCCCCATCAGCCCCGAAGATCCCCTCCTGGC GTTCCCTCCATCCCCATCAGCCCCGAAGATCCCCTTCTGGC < 41bp 1 0.260288312746537 1 0.0445155203342438 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689614 chr1:10689629 nonsynonymous SNV 0.996 4 36 hm5C_associated_SNPs_33513 0 0 1 SF3B4 POSTAR2 ENCODE chr1:10689524-10689641
64251 chrX 48457753 48457753 1 + G A SKCM 48457763 + 48457743 48457783 41 CTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACC CTTTGAGGATAATCCTCGGGCCCTGGGGGCCCGTGGGCACC < 41bp 1 0.147303708737304 1 0.0531412065029144 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457763 chrX:48457753 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_33514 0 0 5 DDX24 POSTAR2 ENCODE chrX:48457744-48457792
64251 chrX 48457753 48457753 1 + G A SKCM 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TAATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG < 41bp 1 0.29467468506065 1 0.0485102534294128 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457753 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_33515 0 0 5 DDX24 POSTAR2 ENCODE chrX:48457744-48457792
64251 chrX 48457753 48457753 1 + G A SKCM 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT AATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT < 41bp 1 0.287817113596433 1 0.344213902950287 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457753 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_33516 0 0 5 DDX24 POSTAR2 ENCODE chrX:48457744-48457792
64251 chr14 60591906 60591906 1 + C T SKCM 60591886 + 60591866 60591906 41 GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTC GGTCATATATTGAGAGTTTACGGTGGTGTTTTGCCTTGGTT < 41bp 1 0.733185010770407 1 0.599945545196533 experiment 0.533629978459186 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60591886 chr14:60591906 nonsynonymous SNV 0.988 4 41 hm5C_associated_SNPs_33517 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr14:60591880-60591920
64251 chr14 24568320 24568320 1 + C A SKCM 24568331 + 24568311 24568351 41 GTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTA GTGCCCGACAAGCGGGAGATCATCTCCTTCGGCAGCGGCTA < 41bp 1 0.262801512692618 1 0.128296136856079 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24568331 chr14:24568320 nonsynonymous SNV 0.997 0 10 hm5C_associated_SNPs_33519 0 0 2 RPS3 POSTAR2 ENCODE chr14:24568310-24568370
64251 chr17 7752246 7752246 1 + G A SKCM 7752242 + 7752222 7752262 41 TACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCG TACCTCAGGCGGGCCCTGGGCCCGAGAGCGCAGGGCGGGCG < 41bp 1 0.669710994241969 1 0.159061372280121 experiment 0.660578011516062 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752242 chr17:7752246 synonymous SNV . 0 25 hm5C_associated_SNPs_33524 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr17 7752246 7752246 1 + G A SKCM 7752243 + 7752223 7752263 41 ACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCGA ACCTCAGGCGGGCCCTGGGCCCGAGAGCGCAGGGCGGGCGA < 41bp 1 0.401866842669195 1 0.370658218860626 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752243 chr17:7752246 synonymous SNV . 0 24 hm5C_associated_SNPs_33525 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7752223-7752263
64251 chr11 20066904 20066904 1 + G A SKCM 20066902 + 20066882 20066922 41 TACCGGAGTTTGCCGAGGCCCAGTAAGTCCAACAGCCGGAA TACCGGAGTTTGCCGAGGCCCAATAAGTCCAACAGCCGGAA < 41bp 1 0.269215072291596 1 0.256852090358734 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAV2 ENSG00000166833 CDS Human protein_coding chr11:20066902 chr11:20066904 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_33526 0 0 1 EIF3H POSTAR2 ENCODE chr11:20066892-20066945
64251 chr1 109772144 109772144 1 + C T SKCM 109772124 + 109772104 109772144 41 GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCT < 41bp 1 0.552267506945526 1 0.836808681488037 experiment 0.895464986108949 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772124 chr1:109772144 stopgain 0.959 1 41 hm5C_associated_SNPs_33527 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 109772144 109772144 1 + C T SKCM 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCTGAGAG < 41bp 1 0.526282068638779 1 0.374760150909424 experiment 0.947435862722441 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772144 stopgain 0.959 1 36 hm5C_associated_SNPs_33528 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 109772143 109772143 1 + C T SKCM 109772124 + 109772104 109772144 41 GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTTC < 41bp 1 0.607867479961376 1 0.782293200492859 experiment 0.784265040077248 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772124 chr1:109772143 synonymous SNV . 0 40 hm5C_associated_SNPs_33529 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 109772143 109772143 1 + C T SKCM 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTTCGAGAG < 41bp 1 0.579760372883839 1 0.327895641326904 experiment 0.840479254232322 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772143 synonymous SNV . 0 35 hm5C_associated_SNPs_33530 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 207510105 207510105 1 + A G SKCM 207510119 + 207510099 207510139 41 AACTACAGAAGTCTCACCAACTTCTCAGAAAACCACCACAA AACTACGGAAGTCTCACCAACTTCTCAGAAAACCACCACAA < 41bp 1 0.306951407532421 1 0.809977650642395 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207510119 chr1:207510105 synonymous SNV . 0 7 hm5C_associated_SNPs_33532 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:207510086-207510107
64251 chr16 30939897 30939897 1 + C T SKCM 30939906 + 30939886 30939926 41 GGTTCTGAATCCGAGCCAGGCTTTCTCATCCTGCCACCCTG GGTTCTGAATCTGAGCCAGGCTTTCTCATCCTGCCACCCTG < 41bp 1 0.0568085114802587 1 0.0305556952953339 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30939906 chr16:30939897 nonsynonymous SNV 0.998 1 12 hm5C_associated_SNPs_33534 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30939880-30939900
64251 chr13 52604978 52604978 1 + C T SKCM 52604967 + 52604947 52604987 41 TGAGAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAG TGAGAAGCGCAACATCCACGCAGCAGCTCATTAGGTACAAG < 41bp 1 0.626229487672807 1 0.275622367858887 experiment 0.747541024654385 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604967 chr13:52604978 stopgain 0.301 1 32 hm5C_associated_SNPs_33535 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr13 52604978 52604978 1 + C T SKCM 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGCGCAACATCCACGCAGCAGCTCATTAGGTACAAGTGC < 41bp 1 0.155766704723452 1 0.064655989408493 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604978 stopgain 0.301 1 29 hm5C_associated_SNPs_33536 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604955-52604987
64251 chr16 69951744 69951744 1 + C T SKCM 69951752 + 69951732 69951772 41 GCGGAATCAGCTCCAGGGGGCCATGCAGCACTTCAGCCAAA GCGGAATCAGCTTCAGGGGGCCATGCAGCACTTCAGCCAAA < 41bp 1 0.0542983515609979 1 0.0638072192668915 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control WWP2 ENSG00000198373 CDS Human protein_coding chr16:69951752 chr16:69951744 synonymous SNV . 0 13 hm5C_associated_SNPs_33539 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:69951726-69951753
64251 chr5 73989524 73989524 1 + T A SKCM 73989526 + 73989506 73989546 41 ACAGAGTTTGGGGAGCATTACGAGGTAAGTTCCATGCAGTT ACAGAGTTTGGGGAGCATAACGAGGTAAGTTCCATGCAGTT < 41bp 1 0.683207673845458 1 0.84485936164856 experiment 0.633584652309084 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73989526 chr5:73989524 stopgain 0.998 1 19 hm5C_associated_SNPs_33546 0 0 4 GPKOW POSTAR2 ENCODE chr5:73989465-73989566
64251 chr14 101419726 101419726 1 + G A SKCM 101419734 + 101419714 101419754 41 TGAGTCATGGACGATGAATACTACGTGTCTGAAACTCTGAG TGAGTCATGGACAATGAATACTACGTGTCTGAAACTCTGAG < 41bp 1 0.498066233743467 1 0.038143128156662 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419734 chr14:101419726 . . 0 13 hm5C_associated_SNPs_33547 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 101419726 101419726 1 + G A SKCM 101419742 + 101419722 101419762 41 GGACGATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA GGACAATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA < 41bp 1 0.526201325600877 1 0.0834716558456421 experiment 0.947597348798245 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419742 chr14:101419726 . . 0 5 hm5C_associated_SNPs_33548 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr1 31811831 31811831 1 + C T SKCM 31811833 + 31811813 31811853 41 GATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCA GATAGAATAAAAGTATCCTTCTCCATGAAGGTTGTCAATCA < 41bp 1 0.795786256269413 1 0.982711434364319 experiment 0.408427487461174 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC17 ENSG00000121766 CDS Human protein_coding chr1:31811833 chr1:31811831 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_33549 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:31811813-31811842
64251 chr2 55277310 55277310 1 - C T SKCM 55277299 - 55277279 55277319 41 GAGGAAGAGGAGGACGAGGACGAAGACCTGGAGGAGCTGGA GAGGAAGAGAAGGACGAGGACGAAGACCTGGAGGAGCTGGA < 41bp 1 0.653682575647791 1 0.759371638298035 experiment 0.692634848704418 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTN4 ENSG00000115310 CDS Human protein_coding chr2:55277299 chr2:55277310 nonsynonymous SNV 0.161 1 10 hm5C_associated_SNPs_33552 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:55277265-55277315
64251 chr1 233514925 233514925 1 + G A SKCM 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TAGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.268650647762082 1 0.0623092949390411 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514925 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_33553 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr6 31594926 31594926 1 + C T SKCM 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCCCTACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.3032548355445 1 0.10245481133461 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594926 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_33554 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594926 31594926 1 + C T SKCM 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCCCTACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.270696147187263 1 0.126917362213135 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594926 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_33555 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594926 31594926 1 + C T SKCM 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCCCTACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.338406111014547 1 0.248966634273529 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594926 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_33556 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594926 31594926 1 + C T SKCM 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCCCTACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.584706888463852 1 0.563100576400757 experiment 0.830586223072296 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594926 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_33557 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr19 54968019 54968019 1 + C T SKCM 54968028 + 54968008 54968048 41 GAGCTGCAGATCGTGGGCACCTGCCCTGACATCACCAAGCA GAGCTGCAGATTGTGGGCACCTGCCCTGACATCACCAAGCA < 41bp 1 0.263618688287564 1 0.417730629444122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54968028 chr19:54968019 synonymous SNV . 0 12 hm5C_associated_SNPs_33558 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:54967967-54968033
64251 chr2 55277311 55277311 1 - C T SKCM 55277299 - 55277279 55277319 41 GAGGAAGAGGAGGACGAGGACGAAGACCTGGAGGAGCTGGA GAGGAAGAAGAGGACGAGGACGAAGACCTGGAGGAGCTGGA < 41bp 1 0.639337936689437 1 0.758288621902466 experiment 0.721324126621127 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RTN4 ENSG00000115310 CDS Human protein_coding chr2:55277299 chr2:55277311 synonymous SNV . 0 9 hm5C_associated_SNPs_33559 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:55277265-55277315
64251 chr4 146576317 146576317 1 + C T SKCM 146576316 + 146576296 146576336 41 TAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCTC TAGGTAATTCGTATTTCTGCCTGAAGTGGAGAGGGGATCTC < 41bp 1 0.783197059621284 1 0.101945698261261 experiment 0.433605880757431 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MMAA ENSG00000151611 CDS Human protein_coding chr4:146576316 chr4:146576317 stopgain 1.000 0 22 hm5C_associated_SNPs_33560 2 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:146576314-146576338
64251 chr10 75548547 75548547 1 + T A SKCM 75548529 + 75548509 75548549 41 ACCCACCAGTGCCTGAGCAGCTACAGCTCCGAATTGCTTTT ACCCACCAGTGCCTGAGCAGCTACAGCTCCGAATTGCTATT < 41bp 1 0.567793112704121 1 0.392419308423996 experiment 0.864413774591757 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75548529 chr10:75548547 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_33562 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:75548540-75548560
64251 chr8 48874103 48874103 1 + C T SKCM 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATCTCTCTCTCAGAGACGTAGAGGCGA < 41bp 1 0.205658467314601 1 0.199394941329956 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874103 nonsynonymous SNV 0.009 2 20 hm5C_associated_SNPs_33563 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48874044-48874106
64251 chr3 50131285 50131285 1 + C T SKCM 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTTCCAT < 41bp 1 0.411377728624937 1 0.257786899805069 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131285 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_33564 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:50131260-50131300
64251 chr11 985546 985546 1 + T G SKCM 985545 + 985525 985565 41 CCAACGCGAAGAATGCCGTGCTCTTCGAGGCCATCAGCTTA CCAACGCGAAGAATGCCGTGCGCTTCGAGGCCATCAGCTTA < 41bp 1 0.0667777429914442 1 0.0536851584911346 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985545 chr11:985546 nonsynonymous SNV 0.968 4 22 hm5C_associated_SNPs_33566 0 0 4 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr10 51582882 51582882 1 + A G SKCM 51582890 + 51582870 51582910 41 AGCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTA AGCTCCTTACATGCCCAGCACCGACCCCCAGGACTGGCTTA < 41bp 1 0.095758258418885 1 0.0544359385967255 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582890 chr10:51582882 nonsynonymous SNV . 0 13 hm5C_associated_SNPs_33567 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:51582864-51582888
64251 chr10 51582882 51582882 1 + A G SKCM 51582891 + 51582871 51582911 41 GCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTAC GCTCCTTACATGCCCAGCACCGACCCCCAGGACTGGCTTAC < 41bp 1 0.262917586752687 1 0.0495795011520386 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582891 chr10:51582882 nonsynonymous SNV . 0 12 hm5C_associated_SNPs_33568 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:51582864-51582888
64251 chr10 51582882 51582882 1 + A G SKCM 51582895 + 51582875 51582915 41 CTTACATACCCAGCACCGACCCCCAGGACTGGCTTACCCAA CTTACATGCCCAGCACCGACCCCCAGGACTGGCTTACCCAA < 41bp 1 0.611810280051286 1 0.309579849243164 experiment 0.776379439897428 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582895 chr10:51582882 nonsynonymous SNV . 0 8 hm5C_associated_SNPs_33569 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:51582864-51582888
64251 chr4 2943344 2943344 1 - G A SKCM 2943341 - 2943321 2943361 41 AAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCACCCG AAGCCCTCCTCACGGATTACCTGGCGGACTGCAGCCACCCG < 41bp 1 0.670202665141039 1 0.663257122039795 experiment 0.659594669717923 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOP14 ENSG00000087269 CDS Human protein_coding chr4:2943341 chr4:2943344 nonsynonymous SNV 0.009 3 18 hm5C_associated_SNPs_33570 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:2943340-2943360
64251 chr19 18729265 18729265 1 + C T SKCM 18729284 + 18729264 18729304 41 ACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT ATCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT < 41bp 1 0.218598447732484 1 0.220620095729828 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729284 chr19:18729265 nonsynonymous SNV 0.736 4 2 hm5C_associated_SNPs_33571 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:18729254-18729288
64251 chr16 70562809 70562809 1 + G T SKCM 70562823 + 70562803 70562843 41 CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC CCCGTGTGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC < 41bp 1 0.264446653013242 1 0.0608790218830109 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70562823 chr16:70562809 nonsynonymous SNV 0.999 4 7 hm5C_associated_SNPs_33572 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:70562780-70562820
64251 chr6 168352612 168352612 1 + C T SKCM 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAT < 41bp 1 0.49553772739651 1 0.552926898002625 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352612 synonymous SNV . 0 41 hm5C_associated_SNPs_33573 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr6 168352612 168352612 1 + C T SKCM 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGATG < 41bp 1 0.0836379977509475 1 0.21358734369278 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352612 synonymous SNV . 0 40 hm5C_associated_SNPs_33574 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:168352586-168352614
64251 chr16 89759817 89759817 1 + C T SKCM 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTTCGGCTTGGCCCGGGCCTATGGTGTCCCAGTA < 41bp 1 0.625968113520139 1 0.812958896160126 experiment 0.748063772959722 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759817 synonymous SNV . 0 15 hm5C_associated_SNPs_33575 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr9 130551705 130551705 1 + C T SKCM 130551725 + 130551705 130551745 41 CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC TATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC < 41bp 1 0.537344056472242 1 0.398193329572678 experiment 0.925311887055516 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130551725 chr9:130551705 synonymous SNV . 0 1 hm5C_associated_SNPs_33576 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130551672-130551713
64251 chrX 100668153 100668153 1 + G A SKCM 100668159 + 100668139 100668179 41 GTGGTGGCGCTTATGGTAGCCAAATGATGGGAGGGATGGGC GTGGTGGCGCTTATAGTAGCCAAATGATGGGAGGGATGGGC < 41bp 1 0.525448283858433 1 0.766635596752167 experiment 0.949103432283134 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668159 chrX:100668153 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_33584 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:100668059-100668154
64251 chr20 47859212 47859212 1 + G A SKCM 47859198 + 47859178 47859218 41 ACCAACACAAGCAAGAAGGCCCTGAAACAGTATCGAGCTGG ACCAACACAAGCAAGAAGGCCCTGAAACAGTATCAAGCTGG < 41bp 1 0.181571018321673 1 0.192166417837143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX27 ENSG00000124228 CDS Human protein_coding chr20:47859198 chr20:47859212 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_33585 0 0 2 GRWD1 POSTAR2 ENCODE chr20:47859162-47859216
64251 chr16 89603197 89603197 1 + C T SKCM 89603199 + 89603179 89603219 41 CTCTTGACCAGCTACCCTCCCAGGGGACCATGAGGAAGCTC CTCTTGACCAGCTACCCTTCCAGGGGACCATGAGGAAGCTC < 41bp 1 0.700947909944049 1 0.798990607261658 experiment 0.598104180111902 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89603199 chr16:89603197 nonsynonymous SNV 0.000 2 19 hm5C_associated_SNPs_33586 0 0 1 PRPF8 POSTAR2 ENCODE chr16:89603146-89603199
64251 chr19 40883999 40883999 1 + C T SKCM 40884016 + 40883996 40884036 41 TTTCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG TTTTCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTG < 41bp 1 0.451065087681769 1 0.149983733892441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884016 chr19:40883999 synonymous SNV . 0 4 hm5C_associated_SNPs_33588 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr19 40883999 40883999 1 + C T SKCM 40884018 + 40883998 40884038 41 TCCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC TTCTGAGGGACTGGGACTCCCCTTACAGCCATGACCTTGAC < 41bp 1 0.265401483866691 1 0.0774160027503967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40884018 chr19:40883999 synonymous SNV . 0 2 hm5C_associated_SNPs_33589 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883984-40884016
64251 chr6 7583117 7583117 1 + G A SKCM 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAAGAGGAGGCTATTAGGAAGATAGAATCGG < 41bp 1 0.0526942951517241 1 0.0655295550823212 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583117 synonymous SNV . 0 13 hm5C_associated_SNPs_33590 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr19 3525944 3525944 1 + C T SKCM 3525949 + 3525929 3525969 41 GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAG GGAGACCGCTTCATCTCCTCCAGAGCCGGAGCCAACTGGAG < 41bp 1 0.418772783301796 1 0.706745445728302 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3525949 chr19:3525944 nonsynonymous SNV 0.843 4 16 hm5C_associated_SNPs_33591 0 0 3 GRWD1 POSTAR2 ENCODE chr19:3525913-3525999
64251 chr19 49967982 49967982 1 + C T SKCM 49967998 + 49967978 49968018 41 TGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA TGTTTCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA < 41bp 1 0.519905912193112 1 0.473666131496429 experiment 0.960188175613776 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967998 chr19:49967982 nonsynonymous SNV 0.048 0 5 hm5C_associated_SNPs_33593 0 0 2 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr17 76399761 76399761 1 + T G SKCM 76399746 + 76399726 76399766 41 ATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGAC ATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTGTTGAC < 41bp 1 0.374362555959542 1 0.0671044588088989 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGS1 ENSG00000087157 CDS Human protein_coding chr17:76399746 chr17:76399761 synonymous SNV . 0 36 hm5C_associated_SNPs_33594 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr17:76399760-76399761
64251 chr17 30806301 30806301 1 + T C SKCM 30806305 + 30806285 30806325 41 GGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTG GGGCAGAGCTCCGGGACGACCCAATCATCAGCACACACTTG < 41bp 1 0.172605349733022 1 0.249768614768982 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30806305 chr17:30806301 synonymous SNV . 0 17 hm5C_associated_SNPs_33595 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:30806159-30806304
64251 chr1 10689598 10689598 1 + C T SKCM 10689614 + 10689594 10689634 41 GTTCCCTCCATCCCCATCAGCCCCGAAGATCCCCTCCTGGC GTTCTCTCCATCCCCATCAGCCCCGAAGATCCCCTCCTGGC < 41bp 1 0.300504751328477 1 0.0740545094013214 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689614 chr1:10689598 nonsynonymous SNV 0.277 2 5 hm5C_associated_SNPs_33596 0 0 2 SF3B4 POSTAR2 ENCODE chr1:10689524-10689641
64251 chr10 43604510 43604510 1 + G A SKCM 43604501 + 43604481 43604521 41 CTGGTTCTCAACCGGAACCTCTCCATCTCGGAGAACCGCAC CTGGTTCTCAACCGGAACCTCTCCATCTCAGAGAACCGCAC < 41bp 1 0.655955636328146 1 0.974481880664825 experiment 0.688088727343707 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RET ENSG00000165731 CDS Human protein_coding chr10:43604501 chr10:43604510 synonymous SNV . 0 30 hm5C_associated_SNPs_33597 3 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr1 154207165 154207165 1 + G A SKCM 154207147 + 154207127 154207167 41 ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGA ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGAGA < 41bp 1 0.398677606804189 1 0.358623564243317 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207147 chr1:154207165 synonymous SNV . 0 39 hm5C_associated_SNPs_33598 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr1 154207166 154207166 1 + G A SKCM 154207147 + 154207127 154207167 41 ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGA ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGAA < 41bp 1 0.442105497360521 1 0.39484965801239 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207147 chr1:154207166 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_33599 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr21 45483585 45483585 1 + C A SKCM 45483598 + 45483578 45483618 41 TGCTGCTCTTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC TGCTGCTATTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC < 41bp 1 0.386732720786428 1 0.456271260976791 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45483598 chr21:45483585 synonymous SNV . 0 8 hm5C_associated_SNPs_33601 0 0 2 PPIG POSTAR2 ENCODE chr21:45483558-45483640
64251 chr17 40695668 40695668 1 + C T SKCM 40695658 + 40695638 40695678 41 GGCCTGGCGGCTGCTGCTCACATCTGCTCCCTCCCTGGCCA GGCCTGGCGGCTGCTGCTCACATCTGCTCCTTCCCTGGCCA < 41bp 1 0.275893757729722 1 0.258825689554214 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695658 chr17:40695668 synonymous SNV . 0 31 hm5C_associated_SNPs_33602 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:40695653-40695693
64251 chr17 40695668 40695668 1 + C T SKCM 40695685 + 40695665 40695705 41 TCCCTCCCTGGCCACCAGCCCCGCCTTCCGCTACGACCTGC TCCTTCCCTGGCCACCAGCCCCGCCTTCCGCTACGACCTGC < 41bp 1 0.261184198846337 1 0.0626807510852814 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695685 chr17:40695668 synonymous SNV . 0 4 hm5C_associated_SNPs_33603 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:40695653-40695693
64251 chr21 45483584 45483584 1 + T C SKCM 45483598 + 45483578 45483618 41 TGCTGCTCTTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC TGCTGCCCTTCCTGCAGAGGCCGTGGGAGGTGGCCCAGCGC < 41bp 1 0.383756289076323 1 0.459765732288361 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45483598 chr21:45483584 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_33605 0 0 2 PPIG POSTAR2 ENCODE chr21:45483558-45483640
64251 chr7 98609786 98609786 1 + C T SKCM 98609794 + 98609774 98609814 41 TCTCTCGGCCGCCGGGCAGCCAGAGAACATGGACAGCCAGC TCTCTCGGCCGCTGGGCAGCCAGAGAACATGGACAGCCAGC < 41bp 1 0.317580618634312 1 0.915179252624512 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98609794 chr7:98609786 synonymous SNV . 0 13 hm5C_associated_SNPs_33607 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98609763-98609796
64251 chr5 140731312 140731312 1 + G T SKCM 140731316 + 140731296 140731336 41 GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG GTGACCTGGAGCCGCGTGAGCTGTTGTCCTACGTGTCCGTG < 41bp 1 0.283916590390629 1 0.0370877981185913 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731316 chr5:140731312 synonymous SNV . 0 17 hm5C_associated_SNPs_33608 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr15 41859614 41859614 1 + C T SKCM 41859602 + 41859582 41859622 41 GAAGTCCTGGCTGTTGTGGTCCCTGTGCCCCCCTTTACCTG GAAGTCCTGGCTGTTGTGGTCCCTGTGCCCCCTTTTACCTG < 41bp 1 0.256277496394813 1 0.042967289686203 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41859602 chr15:41859614 synonymous SNV . 0 33 hm5C_associated_SNPs_33617 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41859599-41859637
64251 chr18 72347510 72347510 1 + T C SKCM 72347515 + 72347495 72347535 41 GACAGCATGAGGAATTGCTGCGGGAGGTGAATAAGTATATA GACAGCATGAGGAATCGCTGCGGGAGGTGAATAAGTATATA < 41bp 1 0.503411625707395 1 0.867993414402008 experiment 0.993176748585211 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72347515 chr18:72347510 nonsynonymous SNV 0.990 3 16 hm5C_associated_SNPs_33625 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr18:72347506-72347517
64251 chr14 105352963 105352963 1 + C T SKCM 105352950 + 105352930 105352970 41 CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCTTC CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTTTTTCTTC < 41bp 1 0.048600599206339 1 0.063671886920929 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105352950 chr14:105352963 nonsynonymous SNV 0.376 4 34 hm5C_associated_SNPs_33626 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:105352949-105352973
64251 chr6 7579526 7579526 1 + G A SKCM 7579519 + 7579499 7579539 41 ATTCCACAGCTGAAAAATACCAAGATCGAAGTTTTGGAAGA ATTCCACAGCTGAAAAATACCAAGATCAAAGTTTTGGAAGA < 41bp 1 0.684432874845738 1 0.699031949043274 experiment 0.631134250308524 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579519 chr6:7579526 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_33627 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7579513-7579549
64251 chr20 62366045 62366045 1 + C T SKCM 62366054 + 62366034 62366074 41 TGCCCTCTGTCCGTCTCTTGCAGTGGTGGGGTCAGATGCTG TGCCCTCTGTCTGTCTCTTGCAGTGGTGGGGTCAGATGCTG < 41bp 1 0.425977829304929 1 0.303201377391815 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZGPAT ENSG00000197114 CDS Human protein_coding chr20:62366054 chr20:62366045 nonsynonymous SNV 0.532 1 12 hm5C_associated_SNPs_33634 0 0 4 BUD13 POSTAR2 ENCODE chr20:62366043-62366127
64251 chr7 150764057 150764057 1 + C T SKCM 150764061 + 150764041 150764081 41 ACCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGG ACCTCGGGCCCGACCCTGGGCCCCCCACAAGCCCCATGAGG < 41bp 1 0.0528611840431035 1 0.0588125288486481 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764061 chr7:150764057 nonsynonymous SNV 0.956 3 17 hm5C_associated_SNPs_33635 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr7 150764057 150764057 1 + C T SKCM 150764062 + 150764042 150764082 41 CCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGT CCTCGGGCCCGACCCTGGGCCCCCCACAAGCCCCATGAGGT < 41bp 1 0.0404339469485251 1 0.0876970887184143 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764062 chr7:150764057 nonsynonymous SNV 0.956 3 16 hm5C_associated_SNPs_33636 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr7 150764057 150764057 1 + C T SKCM 150764063 + 150764043 150764083 41 CTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGTA CTCGGGCCCGACCCTGGGCCCCCCACAAGCCCCATGAGGTA < 41bp 1 0.282654515794971 1 0.146476119756699 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764063 chr7:150764057 nonsynonymous SNV 0.956 3 15 hm5C_associated_SNPs_33637 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr20 32439967 32439967 1 + C T SKCM 32439982 + 32439962 32440002 41 CAGTCCCTCTACCAAATGTTCCCTCTATAGCCCTACCATCA CAGTCTCTCTACCAAATGTTCCCTCTATAGCCCTACCATCA < 41bp 1 0.0624524716665205 1 0.0903692543506622 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32439982 chr20:32439967 nonsynonymous SNV 0.998 1 6 hm5C_associated_SNPs_33639 0 0 1 LARP4 POSTAR2 ENCODE chr20:32439946-32440002
64251 chr20 32439967 32439967 1 + C T SKCM 32439983 + 32439963 32440003 41 AGTCCCTCTACCAAATGTTCCCTCTATAGCCCTACCATCAA AGTCTCTCTACCAAATGTTCCCTCTATAGCCCTACCATCAA < 41bp 1 0.0572569704641275 1 0.0617979764938354 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32439983 chr20:32439967 nonsynonymous SNV 0.998 1 5 hm5C_associated_SNPs_33640 0 0 1 LARP4 POSTAR2 ENCODE chr20:32439946-32440002
64251 chr6 31912759 31912759 1 + G A SKCM 31912772 + 31912752 31912792 41 GGCAGGAGAATCTGGGGGAGCAGTTTTCCTTGAGCGGAGAT GGCAGGAAAATCTGGGGGAGCAGTTTTCCTTGAGCGGAGAT < 41bp 1 0.145475565653312 1 0.261187165975571 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C2 ENSG00000166278 CDS Human protein_coding chr6:31912772 chr6:31912759 nonsynonymous SNV 0.999 4 8 hm5C_associated_SNPs_33641 0 0 3 DDX6 POSTAR2 ENCODE chr6:31912756-31912762
64251 chr11 63743726 63743726 1 + C T SKCM 63743738 + 63743718 63743758 41 TCCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCT TCCTGCTTTGTGACCTTCCTCCTGCCAGCGGGCTGGATCCT < 41bp 1 0.19042256881974 1 0.415048271417618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743738 chr11:63743726 synonymous SNV . 0 9 hm5C_associated_SNPs_33642 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr11 63743726 63743726 1 + C T SKCM 63743739 + 63743719 63743759 41 CCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG CCTGCTTTGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG < 41bp 1 0.551815636201735 1 0.295432299375534 experiment 0.896368727596531 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743739 chr11:63743726 synonymous SNV . 0 8 hm5C_associated_SNPs_33643 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr19 42373208 42373208 1 + C T SKCM 42373193 + 42373173 42373213 41 GTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC GTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCTGAGGC < 41bp 1 0.245086808427614 1 0.107242614030838 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373193 chr19:42373208 stopgain 0.999 1 36 hm5C_associated_SNPs_33644 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373208 42373208 1 + C T SKCM 42373194 + 42373174 42373214 41 TCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCT TCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCTGAGGCT < 41bp 1 0.25277075502836 1 0.11799544095993 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373194 chr19:42373208 stopgain 0.999 1 35 hm5C_associated_SNPs_33645 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373208 42373208 1 + C T SKCM 42373198 + 42373178 42373218 41 AGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAA AGAAACGGCGTCATGCCCAGCCACTTCAGCTGAGGCTCCAA < 41bp 1 0.13261825134272 1 0.480832546949387 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373198 chr19:42373208 stopgain 0.999 1 31 hm5C_associated_SNPs_33646 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373208 42373208 1 + C T SKCM 42373199 + 42373179 42373219 41 GAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAG GAAACGGCGTCATGCCCAGCCACTTCAGCTGAGGCTCCAAG < 41bp 1 0.189321505833674 1 0.251600384712219 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373199 chr19:42373208 stopgain 0.999 1 30 hm5C_associated_SNPs_33647 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373208 42373208 1 + C T SKCM 42373215 + 42373195 42373235 41 CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGG CAGCCACTTCAGCTGAGGCTCCAAGAGTGTGGCCCGCCGGG < 41bp 1 0.271891267936129 1 0.364092320203781 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373215 chr19:42373208 stopgain 0.999 1 14 hm5C_associated_SNPs_33648 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373208 42373208 1 + C T SKCM 42373228 + 42373208 42373248 41 CGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT TGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT < 41bp 1 0.275680391513238 1 0.0794028043746948 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373228 chr19:42373208 stopgain 0.999 1 1 hm5C_associated_SNPs_33649 2 0 37 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr17 38152518 38152518 1 + C T SKCM 38152535 + 38152515 38152555 41 ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC ATTTCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC < 41bp 1 0.352584191130796 1 0.193485230207443 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38152535 chr17:38152518 nonsynonymous SNV 0.996 3 4 hm5C_associated_SNPs_33650 0 0 12 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:38152500-38152520
64251 chr17 37360881 37360881 1 + G A SKCM 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGAA < 41bp 1 0.521090524987145 1 0.15184074640274 experiment 0.95781895002571 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360881 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_33651 0 0 56 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr17 37360881 37360881 1 + G A SKCM 37360876 + 37360856 37360896 41 GGAGATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA GGAGATCATCAAGACTTTATCCAAGAAGGAAGAGACCAAGA < 41bp 1 0.432167870877827 1 0.814360618591309 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360876 chr17:37360881 nonsynonymous SNV 0.998 4 26 hm5C_associated_SNPs_33652 0 0 56 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr1 54665980 54665980 1 + G A SKCM 54665990 + 54665970 54666010 41 CGGCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATG CGGCCTTGGGAGCTTCGGGGCCCCGAGACGCGGGGCGTATG < 41bp 1 0.418982566975334 1 0.159191071987152 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665990 chr1:54665980 nonsynonymous SNV 0.844 0 11 hm5C_associated_SNPs_33653 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:54665964-54665987
64251 chr1 54665980 54665980 1 + G A SKCM 54665992 + 54665972 54666012 41 GCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATGAG GCCTTGGGAGCTTCGGGGCCCCGAGACGCGGGGCGTATGAG < 41bp 1 0.467763423494778 1 0.493975609540939 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665992 chr1:54665980 nonsynonymous SNV 0.844 0 9 hm5C_associated_SNPs_33654 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:54665964-54665987
64251 chr6 5369155 5369155 1 + C T SKCM 5369153 + 5369133 5369173 41 CTCGGTCTACGACAACCTTTCTCCAGTGGTCACGACCTGGC CTCGGTCTACGACAACCTTTCTTCAGTGGTCACGACCTGGC < 41bp 1 0.577617954072394 1 0.406174302101135 experiment 0.844764091855212 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout FARS2 ENSG00000145982 CDS Human protein_coding chr6:5369153 chr6:5369155 nonsynonymous SNV 0.932 4 23 hm5C_associated_SNPs_33655 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:5369142-5369165
64251 chr4 26407852 26407852 1 + C T SKCM 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTTAT < 41bp 1 0.296266800745056 1 0.232951402664185 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407852 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_33668 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:26407819-26407861
64251 chr8 26505265 26505265 1 + C T SKCM 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTTATCT < 41bp 1 0.15534134120964 1 0.168839395046234 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505265 synonymous SNV . 0 37 hm5C_associated_SNPs_33669 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505257-26505284
64251 chr2 10560048 10560048 1 + C T SKCM 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTTTTCCCCTACGGCGACGCTTCCAA < 41bp 1 0.14650655615661 1 0.126129627227783 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560048 synonymous SNV . 0 18 hm5C_associated_SNPs_33682 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10560014-10560052
64251 chr2 100007159 100007159 1 + A G SKCM 100007146 + 100007126 100007166 41 AGGCCTCCTGTTACCTCCTCCTATGAAGGAATTACGAGTGA AGGCCTCCTGTTACCTCCTCCTATGAAGGAATTGCGAGTGA < 41bp 1 0.355852970150097 1 0.210920929908752 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007146 chr2:100007159 synonymous SNV . 0 34 hm5C_associated_SNPs_33684 0 0 5 FXR2 POSTAR2 ENCODE chr2:100007092-100007162
64251 chr3 184042684 184042684 1 + C T SKCM 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAGGAACGAGGACGCTTGAAGGAAGAG < 41bp 1 0.54299121745951 1 0.524377405643463 experiment 0.914017565080981 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042684 synonymous SNV . 0 30 hm5C_associated_SNPs_33685 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr3 184042684 184042684 1 + C T SKCM 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAGGAACGAGGACGCTTGAAGGAAGAGCTGGAA < 41bp 1 0.283301543791533 1 0.426403135061264 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042684 synonymous SNV . 0 24 hm5C_associated_SNPs_33686 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr2 28999786 28999786 1 + C A SKCM 28999796 + 28999776 28999816 41 TGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGCCTATTCT TGTATCAAGTATCGGGAGATCTTTCTCAGCCAGCCTATTCT < 41bp 1 0.1232323012588 1 0.0834178328514099 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1CB ENSG00000213639 CDS Human protein_coding chr2:28999796 chr2:28999786 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_33688 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:28999773-28999829
64251 chr22 29533450 29533450 1 + C T SKCM 29533451 + 29533431 29533471 41 ACCATCCGGGTTCCGGGGGCCTCCCACATCCACTTCAGCTT ACCATCCGGGTTCCGGGGGTCTCCCACATCCACTTCAGCTT < 41bp 1 0.273722939457118 1 0.32380798459053 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533451 chr22:29533450 nonsynonymous SNV 0.992 3 20 hm5C_associated_SNPs_33690 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:29533423-29533455
64251 chr2 85598230 85598230 1 + C T SKCM 85598246 + 85598226 85598266 41 TATTCGAAGGACTGGGCTCGCCGCCCTCCGACACTACCTCT TATTTGAAGGACTGGGCTCGCCGCCCTCCGACACTACCTCT < 41bp 1 0.384008093594418 1 0.4549500644207 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85598246 chr2:85598230 stopgain 0.985 1 5 hm5C_associated_SNPs_33691 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:85598206-85598235
64251 chr4 166254685 166254685 1 + C T SKCM 166254694 + 166254674 166254714 41 CATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTA CATGGGGATCCTTTATAGTTCATGAAGCCCTTTATTTCTTA < 41bp 1 0.560761944062702 1 0.100223928689957 experiment 0.878476111874597 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166254694 chr4:166254685 nonsynonymous SNV 0.976 1 12 hm5C_associated_SNPs_33694 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:166254666-166254697
64251 chr22 42032201 42032201 1 + A G SKCM 42032200 + 42032180 42032220 41 TTCTATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAA TTCTATGGTACCGAGAAAGACGAAAATTCAGTGAATTTTAA < 41bp 1 0.564447253631271 1 0.224667459726334 experiment 0.871105492737459 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032200 chr22:42032201 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_33700 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:42032152-42032202
64251 chr22 32889265 32889265 1 + C T SKCM 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTATATCTGCGTGATTTTTGAGGTGAT < 41bp 1 0.576965919047658 1 0.609486818313599 experiment 0.846068161904685 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889265 stopgain 1.000 1 33 hm5C_associated_SNPs_33701 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:32889226-32889265
64251 chr4 41262675 41262675 1 + C T SKCM 41262672 + 41262652 41262692 41 TTACATTCGCAGCATGAGAACTTCAGGAAAAAGCAGATTGA TTACATTCGCAGCATGAGAACTTTAGGAAAAAGCAGATTGA < 41bp 1 0.246824967156056 1 0.108371794223785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41262672 chr4:41262675 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_33704 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221663 chr4:41262660-41262680
64251 chrX 103434387 103434387 1 + C T SKCM 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTGGGCTCTTTCTTAACGAAGAGGTG < 41bp 1 0.332664305815344 1 0.0769754648208618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434387 synonymous SNV . 0 26 hm5C_associated_SNPs_33705 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:103434363-103434389
64251 chr11 65978611 65978611 1 + C T SKCM 65978630 + 65978610 65978650 41 TCATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC TTATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC < 41bp 1 0.0102513384464544 1 0.063933402299881 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978630 chr11:65978611 nonsynonymous SNV 0.996 3 2 hm5C_associated_SNPs_33706 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978611 65978611 1 + C T SKCM 65978631 + 65978611 65978651 41 CATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT TATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT < 41bp 1 0.303388110610894 1 0.453344762325287 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978631 chr11:65978611 nonsynonymous SNV 0.996 3 1 hm5C_associated_SNPs_33707 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr17 4905816 4905816 1 + C T SKCM 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTTGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG < 41bp 1 0.525677881729406 1 0.685210764408112 experiment 0.948644236541187 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905816 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_33708 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4905814-4905838
64251 chr4 3224155 3224155 1 + C T SKCM 3224157 + 3224137 3224177 41 GAAGAAACTTGGGCCACCCTCCTTGGTGTCCTGGTGACGCA GAAGAAACTTGGGCCACCTTCCTTGGTGTCCTGGTGACGCA < 41bp 1 0.0711214580364787 1 0.474665224552155 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3224157 chr4:3224155 nonsynonymous SNV 0.987 3 19 hm5C_associated_SNPs_33709 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr4:3224140-3224170
64251 chrX 70519861 70519861 1 + C T SKCM 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTGGTGGAACTTCTCCTGCATTCAACCGTGCAGCT < 41bp 1 0.316516648021976 1 0.341029286384583 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519861 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_33710 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:70519729-70519929
64251 chr11 61897294 61897294 1 + C A SKCM 61897299 + 61897279 61897319 41 AGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT AGCCAGCTGAGCTCCAGACGCCTCCGCAGCAAGGACAGTGT < 41bp 1 0.0521180913671409 1 0.11842405796051 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897299 chr11:61897294 synonymous SNV . 0 16 hm5C_associated_SNPs_33724 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr20 62366600 62366600 1 + C T SKCM 62366599 + 62366579 62366619 41 CTGGACCAGTGTGTGGAGACCCTGCAGAAGCAGACCAGGGT CTGGACCAGTGTGTGGAGACCTTGCAGAAGCAGACCAGGGT < 41bp 1 0.176310377144048 1 0.301807403564453 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62366599 chr20:62366600 synonymous SNV . 0 22 hm5C_associated_SNPs_33725 0 0 13 BUD13 POSTAR2 ENCODE chr20:62366564-62366637
64251 chr1 150445119 150445119 1 + C T SKCM 150445130 + 150445110 150445150 41 GAGATGCACCCACTCATCTACCCTCTGTGGATCTTTCGAAC GAGATGCACTCACTCATCTACCCTCTGTGGATCTTTCGAAC < 41bp 1 0.0306576172487752 1 0.0420497357845306 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445130 chr1:150445119 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_33726 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:150445115-150445136
64251 chr9 37424932 37424932 1 + C T SKCM 37424937 + 37424917 37424957 41 CGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGA CGGCCTGCTCTGCCTTCTCTCCGACCACGTGGACAAGAGGA < 41bp 1 0.205745004937278 1 0.756447553634644 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424937 chr9:37424932 synonymous SNV . 0 16 hm5C_associated_SNPs_33727 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr9 37424932 37424932 1 + C T SKCM 37424938 + 37424918 37424958 41 GGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGAT GGCCTGCTCTGCCTTCTCTCCGACCACGTGGACAAGAGGAT < 41bp 1 0.283754780856254 1 0.282757639884949 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424938 chr9:37424932 synonymous SNV . 0 15 hm5C_associated_SNPs_33728 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr19 30313211 30313211 1 + C T SKCM 30313222 + 30313202 30313242 41 TTGCTGCTTCGGCCTTGTATCATTTCTCGTCATCTGAATTG TTGCTGCTTTGGCCTTGTATCATTTCTCGTCATCTGAATTG < 41bp 1 0.0817469374303346 1 0.0634353756904602 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313222 chr19:30313211 nonsynonymous SNV 0.990 4 10 hm5C_associated_SNPs_33730 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:30313204-30313218
64251 chr15 22969327 22969327 1 + C T SKCM 22969313 + 22969293 22969333 41 CCCTGCACGTCTTCTGGGAGCTCAACTATGACTTCCTGCCC CCCTGCACGTCTTCTGGGAGCTCAACTATGACTTTCTGCCC < 41bp 1 0.631075303087133 1 0.33547455072403 experiment 0.737849393825734 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969313 chr15:22969327 synonymous SNV . 0 35 hm5C_associated_SNPs_33732 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr15:22969289-22969328
64251 chr2 220097283 220097283 1 + C T SKCM 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACACTGGATTGGGAGAGGGCTACATTTGAGAAGTTGAGCC < 41bp 1 0.772137934418265 1 0.865075945854187 experiment 0.455724131163469 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097283 nonsynonymous SNV 0.850 2 11 hm5C_associated_SNPs_33733 0 0 10 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr3 49568970 49568970 1 + C T SKCM 49568966 + 49568946 49568986 41 CCCATCCAGGATCGTGCCAACCCCCACATCTCCAGCCATTG CCCATCCAGGATCGTGCCAACCCCTACATCTCCAGCCATTG < 41bp 1 0.195017039217744 1 0.0280861258506775 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568966 chr3:49568970 synonymous SNV . 0 25 hm5C_associated_SNPs_33734 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:49568960-49568980
64251 chr10 122664262 122664262 1 + C T SKCM 122664258 + 122664238 122664278 41 AGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCA AGTCACTACTGTCACCTCGTCAGGTCCCTCTCAGAGCACCA < 41bp 1 0.414513716332489 1 0.714253664016724 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664258 chr10:122664262 synonymous SNV . 0 25 hm5C_associated_SNPs_33735 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:122664237-122664267
64251 chr19 14562690 14562690 1 + C T SKCM 14562705 + 14562685 14562725 41 ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG ACCATTCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG < 41bp 1 0.143544881631491 1 0.0936664044857025 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562705 chr19:14562690 synonymous SNV . 0 6 hm5C_associated_SNPs_33736 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr19 14562690 14562690 1 + C T SKCM 14562706 + 14562686 14562726 41 CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG CCATTCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG < 41bp 1 0.0496035855491472 1 0.200629860162735 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562706 chr19:14562690 synonymous SNV . 0 5 hm5C_associated_SNPs_33737 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr19 14562690 14562690 1 + C T SKCM 14562708 + 14562688 14562728 41 ATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC ATTCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC < 41bp 1 0.722376859404976 1 0.93104612827301 experiment 0.555246281190049 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562708 chr19:14562690 synonymous SNV . 0 3 hm5C_associated_SNPs_33738 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr1 111991770 111991770 1 - G A SKCM 111991768 - 111991748 111991788 41 CGGAAGGAAACCCCACCCCCCCTAGTGCCCCCGGCGGCCCG CGGAAGGAAACCCCACCCTCCCTAGTGCCCCCGGCGGCCCG < 41bp 1 0.234222509100714 1 0.064373642206192 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR77 ENSG00000116455 CDS Human protein_coding chr1:111991768 chr1:111991770 nonsynonymous SNV 0.003 0 19 hm5C_associated_SNPs_33739 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:111991760-111991780
64251 chr12 1005638 1005638 1 + G A SKCM 1005625 + 1005605 1005645 41 GGAACAAGCTGTTCTTCCTGCTGTGATACCAAAGAAAGAGA GGAACAAGCTGTTCTTCCTGCTGTGATACCAAAAAAAGAGA < 41bp 1 0.111885434946173 1 0.464649230241776 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WNK1 ENSG00000060237 CDS Human protein_coding chr12:1005625 chr12:1005638 synonymous SNV . 0 34 hm5C_associated_SNPs_33740 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:1005512-1005658
64251 chr19 44515279 44515279 1 + C T SKCM 44515278 + 44515258 44515298 41 GAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT GAATCCACAGTGGAGAAAAACTATACAGATGTGAGGAGTGT < 41bp 1 0.514854462787108 1 0.0788986384868622 experiment 0.970291074425784 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515278 chr19:44515279 nonsynonymous SNV 0.016 1 22 hm5C_associated_SNPs_33741 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515256-44515280
64251 chr3 58112433 58112433 1 + C T SKCM 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCTTTTCGCACCGGGGGATTACGATGTTA < 41bp 1 0.445428497543053 1 0.0721394419670105 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112433 nonsynonymous SNV 0.944 5 15 hm5C_associated_SNPs_33744 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112433 58112433 1 + C T SKCM 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCTTTTCGCACCGGGGGATTACGATGTTAAT < 41bp 1 0.189783728466613 1 0.248887538909912 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112433 nonsynonymous SNV 0.944 5 13 hm5C_associated_SNPs_33745 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112433 58112433 1 + C T SKCM 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCTTTTCGCACCGGGGGATTACGATGTTAATA < 41bp 1 0.396393025983444 1 0.873940348625183 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112433 nonsynonymous SNV 0.944 5 12 hm5C_associated_SNPs_33746 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr1 39876768 39876768 1 + C T SKCM 39876777 + 39876757 39876797 41 AAGCAGCACCCCCTTGGGGACACAGCCTGCACTGTGGAAAT AAGCAGCACCCTCTTGGGGACACAGCCTGCACTGTGGAAAT < 41bp 1 0.107173731714005 1 0.129159867763519 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA0754 ENSG00000255103 CDS Human other chr1:39876777 chr1:39876768 synonymous SNV . 0 12 hm5C_associated_SNPs_33747 0 0 3 SAFB2 POSTAR2 ENCODE chr1:39876715-39876832
64251 chr7 150033974 150033974 1 + G A SKCM 150033958 + 150033938 150033978 41 CGACTTCCATCTCATGGACCCTCCAGCGGAGAAGCCGGGAG CGACTTCCATCTCATGGACCCTCCAGCGGAGAAGCCAGGAG < 41bp 1 0.725991454885191 1 0.894956350326538 experiment 0.548017090229618 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150033958 chr7:150033974 synonymous SNV . 0 37 hm5C_associated_SNPs_33748 0 0 1 EIF3D POSTAR2 ENCODE chr7:150033930-150033994
64251 chr8 145695010 145695010 1 + C T SKCM 145695008 + 145694988 145695028 41 CCGCCTAGACTGGGTCTTCCCTCCAGACGCCAGCCAGGAGG CCGCCTAGACTGGGTCTTCCCTTCAGACGCCAGCCAGGAGG < 41bp 1 0.623272660754115 1 0.810051321983337 experiment 0.75345467849177 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145695008 chr8:145695010 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_33749 0 0 3 BUD13 POSTAR2 ENCODE chr8:145694995-145695029
64251 chr15 91448685 91448685 1 + C T SKCM 91448697 + 91448677 91448717 41 CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG CCATCTCCTCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG < 41bp 1 0.252839112979404 1 0.247318655252457 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91448697 chr15:91448685 nonsynonymous SNV 0.943 1 9 hm5C_associated_SNPs_33761 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91448672-91448687
64251 chr1 36026527 36026527 1 + C T SKCM 36026508 + 36026488 36026528 41 CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCTACCG CTCTTTTTGCCCCCGACAACCGTGCCCCCTGAATGCTACTG < 41bp 1 0.212759308397994 1 0.471720278263092 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026508 chr1:36026527 nonsynonymous SNV 0.986 2 40 hm5C_associated_SNPs_33762 0 0 6 RBM15 POSTAR2 ENCODE chr1:36026451-36026600
64251 chr16 56501903 56501903 1 + T C SKCM 56501910 + 56501890 56501930 41 TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG TTGAAGAAAGTTCCGAAATTCTCCTGAAGGAGTTTCTTAAG < 41bp 1 0.596746736433992 1 0.872891187667847 experiment 0.806506527132015 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56501910 chr16:56501903 synonymous SNV . 0 14 hm5C_associated_SNPs_33765 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:56501831-56501907
64251 chr11 118516529 118516529 1 + C A SKCM 118516515 + 118516495 118516535 41 GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGG GATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGATCATGG < 41bp 1 0.578252068874506 1 0.680178642272949 experiment 0.843495862250987 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516515 chr11:118516529 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_33766 0 0 7 DDX24 POSTAR2 ENCODE chr11:118516458-118516530
64251 chr8 11679263 11679263 1 + C T SKCM 11679261 + 11679241 11679281 41 TTACGGTTTCCATTTCAGATCTCCCTTGAGTTTAGAAATCT TTACGGTTTCCATTTCAGATCTTCCTTGAGTTTAGAAATCT < 41bp 1 0.0814802616841832 1 0.0208845734596252 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11679261 chr8:11679263 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_33768 0 0 12 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:11679258-11679286
64251 chr22 23656241 23656241 1 + C T SKCM 23656252 + 23656232 23656272 41 TTCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTC TTCCTTTTCTTTCTGGACCACCTGAAAAGGTAGCCCAGCTC < 41bp 1 0.132740993888617 1 0.486305147409439 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656252 chr22:23656241 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_33769 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:23656217-23656246
64251 chr22 23656241 23656241 1 + C T SKCM 23656253 + 23656233 23656273 41 TCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTCT TCCTTTTCTTTCTGGACCACCTGAAAAGGTAGCCCAGCTCT < 41bp 1 0.398625079209723 1 0.379164129495621 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656253 chr22:23656241 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_33770 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:23656217-23656246
64251 chr22 47290702 47290702 1 + T C SKCM 47290696 + 47290676 47290716 41 CCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGT CCAGATCCACATAGACATCCCTCGCACGAGCCCTGAAGCGT < 41bp 1 0.238728090692023 1 0.0867392122745514 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47290696 chr22:47290702 nonsynonymous SNV 0.989 1 27 hm5C_associated_SNPs_33771 0 0 4 GRWD1 POSTAR2 ENCODE chr22:47290686-47290742
64251 chr19 30500204 30500204 1 + G A SKCM 30500196 + 30500176 30500216 41 TGGTGATAACGACCATGAGGCTTTAGGGGTTGGAGATAATT TGGTGATAACGACCATGAGGCTTTAGGGATTGGAGATAATT < 41bp 1 0.210972519064957 1 0.0894590318202972 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30500196 chr19:30500204 nonsynonymous SNV 0.331 0 29 hm5C_associated_SNPs_33772 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30499884-30500263
64251 chr17 7752275 7752275 1 + C T SKCM 7752281 + 7752261 7752301 41 CGAAGAGCCAGTCCCGGGCCCCATGACCCCCACCCAACCGC CGAAGAGCCAGTCCTGGGCCCCATGACCCCCACCCAACCGC < 41bp 1 0.0967981499816498 1 0.0785180926322937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752281 chr17:7752275 nonsynonymous SNV 0.882 1 15 hm5C_associated_SNPs_33773 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr17:7752275-7752276
64251 chr6 146875708 146875708 1 + C A SKCM 146875716 + 146875696 146875736 41 AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTGTT AGATCAAGAGACATTGAGAGCAGAGAACAAATCCCAGTGTT < 41bp 1 0.532762633538817 1 0.705096960067749 experiment 0.934474732922366 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875716 chr6:146875708 synonymous SNV . 0 13 hm5C_associated_SNPs_33774 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:146875703-146875731
64251 chr7 2411438 2411438 1 + C T SKCM 2411420 + 2411400 2411440 41 TTTTTTAAACAGGGTGTTGTCACAAATTTTGAAATTTTCCG TTTTTTAAACAGGGTGTTGTCACAAATTTTGAAATTTTTCG < 41bp 1 0.607333485842512 1 0.43220591545105 experiment 0.785333028314976 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2411420 chr7:2411438 synonymous SNV . 0 39 hm5C_associated_SNPs_33775 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:2411409-2411447
64251 chr2 169551543 169551543 1 + C T SKCM 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTGATGTTTTCTCAGTTTACTGATATCAAAA < 41bp 1 0.470327650408362 1 0.4825758934021 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551543 synonymous SNV . 0 28 hm5C_associated_SNPs_33776 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:169551515-169551551
64251 chr1 156761560 156761560 1 + T G SKCM 156761563 + 156761543 156761583 41 CAGGAAATTGCCCCAGATGCCTCCTTCATCGATGACGAAGC CAGGAAATTGCCCCAGAGGCCTCCTTCATCGATGACGAAGC < 41bp 1 0.39103269550027 1 0.415153950452805 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156761563 chr1:156761560 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_33777 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:156761546-156761573
64251 chr5 912018 912018 1 + C T SKCM 912029 + 912009 912049 41 CGTGGCCTTCGTGGACAGGGCTGACATCAAGCAGTACATTG CGTGGCCTTTGTGGACAGGGCTGACATCAAGCAGTACATTG < 41bp 1 0.362170076091564 1 0.0247178375720978 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:912029 chr5:912018 synonymous SNV . 0 10 hm5C_associated_SNPs_33778 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:911991-912031
64251 chrX 107807122 107807122 1 + G A SKCM 107807137 + 107807117 107807157 41 TGATGGAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG TGATGAAATTCCAGGGCCACCAGGACCAAAAGGAATCAGAG < 41bp 1 0.493695723881215 1 0.753616690635681 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107807137 chrX:107807122 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_33779 0 0 3 BUD13 POSTAR2 ENCODE chrX:107807116-107807157
64251 chr16 67671679 67671679 1 + C T SKCM 67671677 + 67671657 67671697 41 AAAAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAG AAAAAGAGCCAGATGCTGAGCCTGCAGAGGGAGAGGAAGAG < 41bp 1 0.0874774426049097 1 0.149682521820068 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671677 chr16:67671679 synonymous SNV . 0 23 hm5C_associated_SNPs_33791 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671679 67671679 1 + C T SKCM 67671681 + 67671661 67671701 41 AGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGAGG AGAGCCAGATGCTGAGCCTGCAGAGGGAGAGGAAGAGGAGG < 41bp 1 0.663482466574785 1 0.547104477882385 experiment 0.67303506685043 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671681 chr16:67671679 synonymous SNV . 0 19 hm5C_associated_SNPs_33792 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr5 5463392 5463392 1 + T C SKCM 5463400 + 5463380 5463420 41 CTCATCACATGCTTCAGAACCAACCCCACAAGCAGCTGCCT CTCATCACATGCCTCAGAACCAACCCCACAAGCAGCTGCCT < 41bp 1 0.220423739403907 1 0.375604212284088 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ICE1 ENSG00000164151 CDS Human protein_coding chr5:5463400 chr5:5463392 synonymous SNV . 0 13 hm5C_associated_SNPs_33793 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5463367-5463397
64251 chr2 102441810 102441810 1 + C T SKCM 102441795 + 102441775 102441815 41 CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGGTCCATTAC CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGGTCTATTAC < 41bp 1 0.317101752740017 1 0.173393815755844 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102441795 chr2:102441810 synonymous SNV . 0 36 hm5C_associated_SNPs_33794 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:102441788-102441878
64251 chr2 232576099 232576099 1 + T C SKCM 232576110 + 232576090 232576130 41 GGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTG GGCAGAAAACGGAAGAGACGCCCCTGCTAACGGGAATGCTG < 41bp 1 0.230288595781899 1 0.0708431899547577 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232576110 chr2:232576099 nonsynonymous SNV . 0 10 hm5C_associated_SNPs_33795 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr22 31485810 31485810 1 + C T SKCM 31485804 + 31485784 31485824 41 CTGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC CTGCGAGCCCCACCTGGGAGCACATCTAGCTCACCTGCCTC < 41bp 1 0.22617658765555 1 0.164391249418259 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMTN ENSG00000183963 CDS Human protein_coding chr22:31485804 chr22:31485810 synonymous SNV . 0 27 hm5C_associated_SNPs_33796 0 0 2 GRWD1 POSTAR2 ENCODE chr22:31485705-31485839
64251 chr19 41811648 41811648 1 + C T SKCM 41811651 + 41811631 41811671 41 CACAGCCCCACCGCCTCCACCTCCACCACCACCTGCCTACA CACAGCCCCACCGCCTCTACCTCCACCACCACCTGCCTACA < 41bp 1 0.709629528582581 1 0.909589231014252 experiment 0.580740942834838 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41811651 chr19:41811648 nonsynonymous SNV 0.999 2 18 hm5C_associated_SNPs_33797 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:41811627-41811687
64251 chr8 107752590 107752590 1 + C T SKCM 107752575 + 107752555 107752595 41 ACTTTGTTTTCTAAAGCTTACCAAGCATCTTCCACCAAGAA ACTTTGTTTTCTAAAGCTTACCAAGCATCTTCCACTAAGAA < 41bp 1 0.0543972317381117 1 0.0817886590957642 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OXR1 ENSG00000164830 CDS Human protein_coding chr8:107752575 chr8:107752590 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_33798 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr8:107752579-107752640
64251 chr17 79408931 79408931 1 + C T SKCM 79408935 + 79408915 79408955 41 CTTCCCCAGCGTGGCCCGGGCCGCCCCTGCCCACCCCATGG CTTCCCCAGCGTGGCCTGGGCCGCCCCTGCCCACCCCATGG < 41bp 1 0.131380620158021 1 0.171023607254028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79408935 chr17:79408931 nonsynonymous SNV 0.430 3 17 hm5C_associated_SNPs_33800 0 0 1 METAP2 POSTAR2 ENCODE chr17:79408885-79409026
64251 chr7 44741180 44741180 1 + C T SKCM 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCGCCACCCTGAGGCCAGATCCAGCTTTGATGAGATGCTTC < 41bp 1 0.20203740148543 1 0.573384523391724 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741180 synonymous SNV . 0 10 hm5C_associated_SNPs_33802 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr12 57597268 57597268 1 + A G SKCM 57597276 + 57597256 57597296 41 GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGG GACGCCGACTGCGTGGACGGCAGCGACGAGGAGGCCTGCGG < 41bp 1 0.277490355243482 1 0.331799685955048 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57597276 chr12:57597268 nonsynonymous SNV 0.990 1 13 hm5C_associated_SNPs_33803 0 0 4 GRWD1 POSTAR2 ENCODE chr12:57597232-57597282
64251 chr1 206653239 206653239 1 + C T SKCM 206653240 + 206653220 206653260 41 GGACGTCCCCAAGTTCGTCCCCAAAGTGGACCTGCAGGCGG GGACGTCCCCAAGTTCGTCTCCAAAGTGGACCTGCAGGCGG < 41bp 1 0.513756386424229 1 0.352956026792526 experiment 0.972487227151543 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IKBKE ENSG00000143466 CDS Human other chr1:206653240 chr1:206653239 nonsynonymous SNV 0.970 2 20 hm5C_associated_SNPs_33804 0 0 1 PPIG POSTAR2 ENCODE chr1:206653233-206653278
64251 chr17 47004384 47004384 1 + G T SKCM 47004386 + 47004366 47004406 41 CCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTG CCCTCTTGATGCGCCTGGTACTGATACGTCAGAAAGTGCTG < 41bp 1 0.308709951675248 1 0.0837374925613403 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004386 chr17:47004384 nonsynonymous SNV 0.999 0 19 hm5C_associated_SNPs_33805 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47004370-47004485
64251 chr11 61630777 61630777 1 + T C SKCM 61630766 + 61630746 61630786 41 TCTTGCAGGTTCCTGGAGAGCCACTGGTTTGTGTGGGTCAC TCTTGCAGGTTCCTGGAGAGCCACTGGTTTGCGTGGGTCAC < 41bp 1 0.19355004876393 1 0.0792540013790131 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61630766 chr11:61630777 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_33806 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:61630776-61630825
64251 chr11 119050802 119050802 1 + C T SKCM 119050815 + 119050795 119050835 41 CGCTTCTCCGCTGAGGTGCTCAGCTCCCTGCGTCAGCTCAA CGCTTCTTCGCTGAGGTGCTCAGCTCCCTGCGTCAGCTCAA < 41bp 1 0.341752392372153 1 0.16160973906517 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050815 chr11:119050802 nonsynonymous SNV 0.717 3 8 hm5C_associated_SNPs_33807 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:119050801-119050802
64251 chr11 48134417 48134417 1 + G A SKCM 48134404 + 48134384 48134424 41 CTTTCATAAACAGAATGGAACTGGAACACCTCAGGTGGAAA CTTTCATAAACAGAATGGAACTGGAACACCTCAAGTGGAAA < 41bp 1 0.522150989613324 1 0.415155529975891 experiment 0.955698020773352 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48134404 chr11:48134417 synonymous SNV . 0 34 hm5C_associated_SNPs_33809 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:48134382-48134420
64251 chr22 23656240 23656240 1 + C T SKCM 23656252 + 23656232 23656272 41 TTCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTC TTCCTTTTTCTTCTGGACCACCTGAAAAGGTAGCCCAGCTC < 41bp 1 0.136992023436007 1 0.419651985168457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656252 chr22:23656240 synonymous SNV . 0 9 hm5C_associated_SNPs_33812 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:23656217-23656246
64251 chr22 23656240 23656240 1 + C T SKCM 23656253 + 23656233 23656273 41 TCCTTTTCCTTCTGGACCACCTGAAAAGGTAGCCCAGCTCT TCCTTTTTCTTCTGGACCACCTGAAAAGGTAGCCCAGCTCT < 41bp 1 0.426047294239468 1 0.41056877374649 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23656253 chr22:23656240 synonymous SNV . 0 8 hm5C_associated_SNPs_33813 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:23656217-23656246
64251 chr22 22040809 22040809 1 + C T SKCM 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCATCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.295688277457143 1 0.362764030694962 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040809 nonsynonymous SNV 0.890 4 5 hm5C_associated_SNPs_33814 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr11 65978657 65978657 1 + G A SKCM 65978638 + 65978618 65978658 41 TTAAGCGAGATGCCAACAAGCTGCAGATCATGCTGCAAAGG TTAAGCGAGATGCCAACAAGCTGCAGATCATGCTGCAAAAG < 41bp 1 0.628145041432555 1 0.372699856758118 experiment 0.743709917134889 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978638 chr11:65978657 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_33815 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr7 23339025 23339025 1 + G A SKCM 23339007 + 23338987 23339027 41 CGTGTGGCGCGGCTGCTCGCCCCACTAATGTGGCGCAGGGC CGTGTGGCGCGGCTGCTCGCCCCACTAATGTGGCGCAGAGC < 41bp 1 0.185527900982692 1 0.276436597108841 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23339007 chr7:23339025 synonymous SNV . 0 39 hm5C_associated_SNPs_33816 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:23339020-23339040
64251 chr13 77570096 77570096 1 + G A SKCM 77570092 + 77570072 77570112 41 ATTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTT ATTAACTGGCAAGAACTACACAATAGAATGGTATGAACTTT < 41bp 1 0.642735245020702 1 0.269793629646301 experiment 0.714529509958596 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570092 chr13:77570096 nonsynonymous SNV 0.962 1 25 hm5C_associated_SNPs_33818 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:77570052-77570123
64251 chr22 22040810 22040810 1 + C T SKCM 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACTTCCACCGCGATGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.317697183715534 1 0.324733138084412 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040810 synonymous SNV . 0 6 hm5C_associated_SNPs_33819 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chr3 58118608 58118608 1 + G A SKCM 58118613 + 58118593 58118633 41 CACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAAT CACCCCATCTCAGGAAGGACCTTACATGGTCTCAGTTAAAT < 41bp 1 0.0161153939021759 1 0.20160374045372 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58118613 chr3:58118608 synonymous SNV . 0 16 hm5C_associated_SNPs_33821 0 0 1 FXR2 POSTAR2 ENCODE chr3:58118581-58118618
64251 chr19 41807520 41807520 1 + C T SKCM 41807534 + 41807514 41807554 41 TTTGTCCCACTGACGAGGACCTAAAAGACCGAACAATAAAG TTTGTCTCACTGACGAGGACCTAAAAGACCGAACAATAAAG < 41bp 1 0.317318042081911 1 0.199053734540939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41807534 chr19:41807520 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_33825 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:41807442-41807523
64251 chr1 10239580 10239580 1 + C T SKCM 10239562 + 10239542 10239582 41 ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCCCTT ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCCTTT < 41bp 1 0.421409098464792 1 0.639266788959503 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10239562 chr1:10239580 synonymous SNV . 0 39 hm5C_associated_SNPs_33826 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:10239575-10239607
64251 chr1 10239579 10239579 1 + C T SKCM 10239562 + 10239542 10239582 41 ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCCCTT ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCTCTT < 41bp 1 0.424179014304765 1 0.681045651435852 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10239562 chr1:10239579 nonsynonymous SNV 1.000 5 38 hm5C_associated_SNPs_33827 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:10239575-10239607
64251 chr1 109804140 109804140 1 + C T SKCM 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTGTCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG < 41bp 1 0.240129208322536 1 0.275872051715851 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804140 nonsynonymous SNV 0.935 3 5 hm5C_associated_SNPs_33829 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr12 54675591 54675591 1 + C T SKCM 54675598 + 54675578 54675618 41 GGTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTG GGTAATGAGAGATTCAAACACCAAGCGCTCCAGGGGCTTTG < 41bp 1 0.350568151337861 1 0.298795104026794 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54675598 chr12:54675591 nonsynonymous SNV 0.996 4 14 hm5C_associated_SNPs_33832 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:54675564-54675592
64251 chr12 54675591 54675591 1 + C T SKCM 54675599 + 54675579 54675619 41 GTAATGAGAGATCCAAACACCAAGCGCTCCAGGGGCTTTGG GTAATGAGAGATTCAAACACCAAGCGCTCCAGGGGCTTTGG < 41bp 1 0.526009274669629 1 0.182909071445465 experiment 0.947981450660743 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54675599 chr12:54675591 nonsynonymous SNV 0.996 4 13 hm5C_associated_SNPs_33833 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:54675564-54675592
64251 chr19 50155897 50155897 1 + C T SKCM 50155914 + 50155894 50155934 41 GATCGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTCCTCTTC GATTGGCGCCGCTCGGGGGCCGCCTCCTCCTCCTCCTCTTC < 41bp 1 0.311492510903796 1 0.0679184198379517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155914 chr19:50155897 nonsynonymous SNV 0.738 3 4 hm5C_associated_SNPs_33835 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50155895-50155933
64251 chr12 132516578 132516578 1 + C T SKCM 132516568 + 132516548 132516588 41 CTCCACTCACAGCCGTACCACAGGTATAAACCTTGTAGAGG CTCCACTCACAGCCGTACCACAGGTATAAATCTTGTAGAGG < 41bp 1 0.192628574140955 1 0.129962801933289 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132516568 chr12:132516578 synonymous SNV . 0 31 hm5C_associated_SNPs_33836 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:132516575-132516605
64251 chr2 153471384 153471384 1 + G A SKCM 153471368 + 153471348 153471388 41 CCTATTCTGGTTTTTAGAAGCTGAAACACACTGAGAGTGAC CCTATTCTGGTTTTTAGAAGCTGAAACACACTGAGAATGAC < 41bp 1 0.393117536095541 1 0.75548380613327 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153471368 chr2:153471384 nonsynonymous SNV 0.995 5 37 hm5C_associated_SNPs_33839 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:153471383-153471384
64251 chr12 53673625 53673625 1 + C T SKCM 53673618 + 53673598 53673638 41 CCTGCCACATCACCCAGCTCCTCCTGACCCTCGGCTGTCCC CCTGCCACATCACCCAGCTCCTCCTGATCCTCGGCTGTCCC < 41bp 1 0.248323698143507 1 0.115392655134201 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53673618 chr12:53673625 nonsynonymous SNV 0.136 0 28 hm5C_associated_SNPs_33840 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr12:53673604-53673640
64251 chr5 71493387 71493387 1 + C T SKCM 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCCGCTCCTCATTGGATC < 41bp 1 0.184233644797178 1 0.112873911857605 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493387 nonsynonymous SNV 0.625 2 29 hm5C_associated_SNPs_33841 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493387 71493387 1 + C T SKCM 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCCGCTCCTCATTGGATCCGAG < 41bp 1 0.0591629994471366 1 0.133030652999878 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493387 nonsynonymous SNV 0.625 2 25 hm5C_associated_SNPs_33842 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr16 19548854 19548854 1 + C T SKCM 19548865 + 19548845 19548885 41 AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA AAAAAGATATCCTAAGGGATCTGGCTTCGTTAACAAGAATA < 41bp 1 0.401904664022124 1 0.293170064687729 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548865 chr16:19548854 synonymous SNV . 0 10 hm5C_associated_SNPs_33843 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:19548850-19548873
64251 chr16 50342258 50342258 1 + C T SKCM 50342243 + 50342223 50342263 41 TTCCCTCCTCTCCAGGACGGCGGCACTGGGTGTGTCCTTCG TTCCCTCCTCTCCAGGACGGCGGCACTGGGTGTGTTCTTCG < 41bp 1 0.489099588407648 1 0.323298215866089 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY7 ENSG00000121281 CDS Human protein_coding chr16:50342243 chr16:50342258 nonsynonymous SNV 0.997 1 36 hm5C_associated_SNPs_33860 0 0 6 DDX24 POSTAR2 ENCODE chr16:50342209-50342325
64251 chr11 65978617 65978617 1 + C T SKCM 65978630 + 65978610 65978650 41 TCATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC TCATTTCTTTAAGCGAGATGCCAACAAGCTGCAGATCATGC < 41bp 1 0.0125151861635478 1 0.0916063487529755 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978630 chr11:65978617 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_33861 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978617 65978617 1 + C T SKCM 65978631 + 65978611 65978651 41 CATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT CATTTCTTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT < 41bp 1 0.276069205781007 1 0.415605783462524 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978631 chr11:65978617 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_33862 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr18 77475254 77475254 1 + C T SKCM 77475248 + 77475228 77475268 41 CTCATCTACCTGGAGGAGATCCTGGTCCGTGTACACACTGA CTCATCTACCTGGAGGAGATCCTGGTTCGTGTACACACTGA < 41bp 1 0.155837883816296 1 0.269387036561966 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77475248 chr18:77475254 synonymous SNV . 0 27 hm5C_associated_SNPs_33863 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr18:77475237-77475272
64251 chr4 1742647 1742647 1 + G A SKCM 1742652 + 1742632 1742672 41 TCTGAACTCCATGGAGAAGTCCTTCTCCGACCTCTTCAAGC TCTGAACTCCATGGAAAAGTCCTTCTCCGACCTCTTCAAGC < 41bp 1 0.0208941809302695 1 0.0209521353244781 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TACC3 ENSG00000013810 CDS Human protein_coding chr4:1742652 chr4:1742647 synonymous SNV . 0 16 hm5C_associated_SNPs_33864 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:1742583-1742665
64251 chr2 73477004 73477004 1 + C T SKCM 73476990 + 73476970 73477010 41 CAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTCGATGCC CAGTGTGAATGCTCTGTCAGCAGATGTGCTGGGTTGATGCC < 41bp 1 0.541978525706448 1 0.535903036594391 experiment 0.916042948587104 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476990 chr2:73477004 stopgain 0.888 0 35 hm5C_associated_SNPs_33872 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr2 73477004 73477004 1 + C T SKCM 73477009 + 73476989 73477029 41 GCAGATGTGCTGGGTCGATGCCAGGTGTTTGAAGAGACCCA GCAGATGTGCTGGGTTGATGCCAGGTGTTTGAAGAGACCCA < 41bp 1 0.761735254788104 1 0.46643602848053 experiment 0.476529490423791 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477009 chr2:73477004 stopgain 0.888 0 16 hm5C_associated_SNPs_33873 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr14 39645288 39645288 1 + C T SKCM 39645306 + 39645286 39645326 41 ATCCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGG ATTCAAGCCAGATTGCTGGCCCTTTCTGGTCCTGGTGGAGG < 41bp 1 0.0288254789148212 1 0.0179023146629333 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39645306 chr14:39645288 synonymous SNV . 0 3 hm5C_associated_SNPs_33874 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr14:39645270-39645300
64251 chr14 104124103 104124103 1 + T C SKCM 104124107 + 104124087 104124127 41 AAATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGT AAATATGATGACGACACTTCCCCATCCGTGAGTGGCTCTGT < 41bp 1 0.0873228229708543 1 0.234586805105209 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124107 chr14:104124103 nonsynonymous SNV 0.907 0 17 hm5C_associated_SNPs_33875 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr14 104124103 104124103 1 + T C SKCM 104124108 + 104124088 104124128 41 AATATGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTA AATATGATGACGACACTTCCCCATCCGTGAGTGGCTCTGTA < 41bp 1 0.040203676664756 1 0.129195541143417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124108 chr14:104124103 nonsynonymous SNV 0.907 0 16 hm5C_associated_SNPs_33876 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr14 104124103 104124103 1 + T C SKCM 104124112 + 104124092 104124132 41 TGATGACGACATTTCCCCATCCGTGAGTGGCTCTGTAGCAA TGATGACGACACTTCCCCATCCGTGAGTGGCTCTGTAGCAA < 41bp 1 0.176248477415911 1 0.232467800378799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KLC1 ENSG00000126214;ENSG00000256500 CDS Human other chr14:104124112 chr14:104124103 nonsynonymous SNV 0.907 0 12 hm5C_associated_SNPs_33877 0 0 5 DDX24 POSTAR2 ENCODE chr14:104124018-104124115
64251 chr22 38021897 38021897 1 + C G SKCM 38021903 + 38021883 38021923 41 CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG CCCTGGCGAGCAGGGCAGCCCTGAGCAGCCCAGTGCCTCAG < 41bp 1 0.657881630058163 1 0.156625270843506 experiment 0.684236739883673 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021903 chr22:38021897 nonsynonymous SNV 0.004 0 15 hm5C_associated_SNPs_33878 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38021893-38021941
64251 chr16 57685239 57685239 1 + C T SKCM 57685240 + 57685220 57685260 41 TCGAGAACTCCGAAGAGGCCCTCACAGTCCATGCCCCTTTC TCGAGAACTCCGAAGAGGCTCTCACAGTCCATGCCCCTTTC < 41bp 1 0.380329168965314 1 0.0605655610561371 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRG1 ENSG00000205336 CDS Human protein_coding chr16:57685240 chr16:57685239 nonsynonymous SNV 0.160 0 20 hm5C_associated_SNPs_33879 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:57685220-57685240
64251 chr4 166408639 166408639 1 + G A SKCM 166408636 + 166408616 166408656 41 AGCAACTGTTTTGAGATCACCGTGGAGCTTAGCTGTGAGAA AGCAACTGTTTTGAGATCACCGTAGAGCTTAGCTGTGAGAA < 41bp 1 0.279520573237889 1 0.622668623924255 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPE ENSG00000109472 CDS Human protein_coding chr4:166408636 chr4:166408639 synonymous SNV . 0 24 hm5C_associated_SNPs_33880 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:166408600-166408640
64251 chr19 10935753 10935753 1 + C T SKCM 10935765 + 10935745 10935785 41 GATGGGGCCCAGGAGAACACCTTCTCCATGGACCCCCAACT GATGGGGCTCAGGAGAACACCTTCTCCATGGACCCCCAACT < 41bp 1 0.167779419543544 1 0.138271629810333 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10935765 chr19:10935753 synonymous SNV . 0 9 hm5C_associated_SNPs_33882 0 0 5 BUD13 POSTAR2 ENCODE chr19:10935731-10935763
64251 chr4 7026944 7026944 1 + C T SKCM 7026933 + 7026913 7026953 41 AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACG AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCTATCGCCACG < 41bp 1 0.24477580322908 1 0.0553560256958008 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026933 chr4:7026944 synonymous SNV . 0 32 hm5C_associated_SNPs_33883 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:7026935-7026957
64251 chrX 73045901 73045901 1 - C T SKCM 73045890 - 73045870 73045910 41 TATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCCA TATGGAAAGAGTGACTGTGCCTGGGACAAAGCGAGGTCCCA < 41bp 1 0.691452214636821 1 0.411805331707001 experiment 0.617095570726359 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045890 chrX:73045901 . . 0 10 hm5C_associated_SNPs_33885 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045901 73045901 1 - C T SKCM 73045891 - 73045871 73045911 41 TTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAGGTCCC TTATGGAAAGAGTGACTGTGCCTGGGACAAAGCGAGGTCCC < 41bp 1 0.293474234488029 1 0.399386912584305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045891 chrX:73045901 . . 0 11 hm5C_associated_SNPs_33886 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73045901 73045901 1 - C T SKCM 73045896 - 73045876 73045916 41 GATGGTTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAG GATGGTTATGGAAAGAGTGACTGTGCCTGGGACAAAGCGAG < 41bp 1 0.19970319801852 1 0.161518126726151 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045896 chrX:73045901 . . 0 16 hm5C_associated_SNPs_33887 0 0 87 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr10 60580162 60580162 1 + C T SKCM 60580149 + 60580129 60580169 41 ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT ATCGATCTTCAGACATTCCTCACTCTCACAGATTAGGATCT < 41bp 1 0.0886036208651317 1 0.153360158205032 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60580149 chr10:60580162 stopgain 1.000 1 34 hm5C_associated_SNPs_33888 0 0 6 HNRNPD POSTAR2 GSE52971,GSM1279667 chr10:60580120-60580200
64251 chr1 200869295 200869295 1 + C T SKCM 200869306 + 200869286 200869326 41 CCCAAGGTTCGCCGCAGGATCGGAGCGGCTTACAAACTGGA CCCAAGGTTTGCCGCAGGATCGGAGCGGCTTACAAACTGGA < 41bp 1 0.618564640165337 1 0.534213781356812 experiment 0.762870719669326 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200869306 chr1:200869295 nonsynonymous SNV 0.987 4 10 hm5C_associated_SNPs_33889 0 0 1 PPIG POSTAR2 ENCODE chr1:200869214-200869296
64251 chr9 131296136 131296136 1 + G A SKCM 131296139 + 131296119 131296159 41 TCCACCCCAGAGTGGGGGACCTCATTCTTGCTCATCTACAT TCCACCCCAGAGTGGGGAACCTCATTCTTGCTCATCTACAT < 41bp 1 0.416607754013311 1 0.0658001601696014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GLE1 ENSG00000119392 CDS Human protein_coding chr9:131296139 chr9:131296136 nonsynonymous SNV 0.981 1 18 hm5C_associated_SNPs_33891 0 0 2 FXR2 POSTAR2 ENCODE chr9:131296099-131296148
64251 chr19 47111768 47111768 1 + C T SKCM 47111772 + 47111752 47111792 41 TGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGA TGACTTCCCGGAGTTCTTGACCATGATGGCCAGAAAGATGA < 41bp 1 0.115594195930031 1 0.0447540581226349 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111772 chr19:47111768 synonymous SNV . 0 17 hm5C_associated_SNPs_33892 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111768 47111768 1 + C T SKCM 47111782 + 47111762 47111802 41 GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGA GAGTTCTTGACCATGATGGCCAGAAAGATGAAGGACACAGA < 41bp 1 0.534970464969816 1 0.672411978244781 experiment 0.930059070060368 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111782 chr19:47111768 synonymous SNV . 0 7 hm5C_associated_SNPs_33893 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr10 71243603 71243603 1 + C T SKCM 71243594 + 71243574 71243614 41 TGGTCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAAC TGGTCTCCTTCATTGGTGTGCTGGCGTCCTTCCGTGACAAC < 41bp 1 0.448263910303391 1 0.229879021644592 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243594 chr10:71243603 nonsynonymous SNV 0.991 4 30 hm5C_associated_SNPs_33894 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243603 71243603 1 + C T SKCM 71243598 + 71243578 71243618 41 CTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGT CTCCTTCATTGGTGTGCTGGCGTCCTTCCGTGACAACCTGT < 41bp 1 0.147801483502549 1 0.240323930978775 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243598 chr10:71243603 nonsynonymous SNV 0.991 4 26 hm5C_associated_SNPs_33895 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243603 71243603 1 + C T SKCM 71243601 + 71243581 71243621 41 CTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACC CTTCATTGGTGTGCTGGCGTCCTTCCGTGACAACCTGTACC < 41bp 1 0.0197475462204182 1 0.0970612168312073 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243601 chr10:71243603 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_33896 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243603 71243603 1 + C T SKCM 71243606 + 71243586 71243626 41 TTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACCTTCTC TTGGTGTGCTGGCGTCCTTCCGTGACAACCTGTACCTTCTC < 41bp 1 0.724071457711555 1 0.811131358146667 experiment 0.55185708457689 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243606 chr10:71243603 nonsynonymous SNV 0.991 4 18 hm5C_associated_SNPs_33897 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr19 47111767 47111767 1 + C T SKCM 47111772 + 47111752 47111792 41 TGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGA TGACTTCCCGGAGTTTCTGACCATGATGGCCAGAAAGATGA < 41bp 1 0.102249721573921 1 0.0366709232330322 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111772 chr19:47111767 synonymous SNV . 0 16 hm5C_associated_SNPs_33898 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111767 47111767 1 + C T SKCM 47111782 + 47111762 47111802 41 GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGA GAGTTTCTGACCATGATGGCCAGAAAGATGAAGGACACAGA < 41bp 1 0.572671079715508 1 0.758631587028503 experiment 0.854657840568984 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111782 chr19:47111767 synonymous SNV . 0 6 hm5C_associated_SNPs_33899 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr16 12618679 12618679 1 + C T SKCM 12618659 + 12618639 12618679 41 CCCCGAGTTCGCTGCCAGCCCCAAGAAGGAGACCCTCATCC CCCCGAGTTCGCTGCCAGCCCCAAGAAGGAGACCCTCATCT < 41bp 1 0.141778629568943 1 0.268448114395142 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX29 ENSG00000048471 CDS Human protein_coding chr16:12618659 chr16:12618679 stopgain 0.707 1 41 hm5C_associated_SNPs_33901 0 0 1 PRPF8 POSTAR2 ENCODE chr16:12618678-12618733
64251 chr3 142840893 142840893 1 + C T SKCM 142840885 + 142840865 142840905 41 GCTAAGACGCTGCAGACAGCCCTGCAGCCCCCTGACTGGCT GCTAAGACGCTGCAGACAGCCCTGCAGCTCCCTGACTGGCT < 41bp 1 0.111357625363432 1 0.0722450613975525 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840885 chr3:142840893 nonsynonymous SNV 0.994 4 29 hm5C_associated_SNPs_33902 0 0 2 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr3 142840893 142840893 1 + C T SKCM 142840907 + 142840887 142840927 41 TGCAGCCCCCTGACTGGCTGCAGGGCCACTACCTGGTGGTG TGCAGCTCCCTGACTGGCTGCAGGGCCACTACCTGGTGGTG < 41bp 1 0.516283423342764 1 0.731511056423187 experiment 0.967433153314472 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840907 chr3:142840893 nonsynonymous SNV 0.994 4 7 hm5C_associated_SNPs_33903 0 0 2 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr6 7579663 7579663 1 + G A SKCM 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAAGAGCTGAAGA < 41bp 1 0.324124625607543 1 0.40943855047226 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579663 synonymous SNV . 0 31 hm5C_associated_SNPs_33910 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:7579660-7579680
64251 chr17 17697985 17697985 1 + C T SKCM 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGCTTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG < 41bp 1 0.0650707336413198 1 0.0150933861732483 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17697985 synonymous SNV . 0 6 hm5C_associated_SNPs_33911 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:17697929-17697992
64251 chr6 27101030 27101030 1 + C T SKCM 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACCTGACTGCCGAGATCCTGGAACTGGCGG < 41bp 1 0.595631866798459 1 0.678173899650574 experiment 0.808736266403081 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101030 synonymous SNV . 0 19 hm5C_associated_SNPs_33914 0 0 45 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr17 56833470 56833470 1 + G A SKCM 56833479 + 56833459 56833499 41 AACCCGAACCCGAACCCGAACCCGAACCCGAGTCCGAGCCC AACCCGAACCCAAACCCGAACCCGAACCCGAGTCCGAGCCC < 41bp 1 0.770783618530011 1 0.257336467504501 experiment 0.458432762939977 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPM1E ENSG00000175175 CDS Human protein_coding chr17:56833479 chr17:56833470 nonsynonymous SNV 0.767 1 12 hm5C_associated_SNPs_33915 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:56833465-56833492
64251 chr14 21464975 21464975 1 + T G SKCM 21464984 + 21464964 21465004 41 GTGTCAGCTCCTGGGGAGATCTTTTACCTGTGCTTACTCCG GTGTCAGCTCCGGGGGAGATCTTTTACCTGTGCTTACTCCG < 41bp 1 0.201153414106641 1 0.107245057821274 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464984 chr14:21464975 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_33916 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:21464934-21464997
64251 chr19 42839490 42839490 1 + A C SKCM 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTCGTCCTATACCACTTCTCCGCCAACACCTGGGAGTCTT < 41bp 1 0.116417533813339 1 0.355312764644623 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839490 nonsynonymous SNV 0.992 2 14 hm5C_associated_SNPs_33917 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:42839462-42839494
64251 chr13 49765165 49765165 1 + A T SKCM 49765179 + 49765159 49765199 41 ATCTTTACTTGTGCAGACTCCAGCTGTGCCTCCTGGCCCAT ATCTTTTCTTGTGCAGACTCCAGCTGTGCCTCCTGGCCCAT < 41bp 1 0.592226232164834 1 0.271558225154877 experiment 0.815547535670333 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49765179 chr13:49765165 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_33934 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:49765148-49765187
64251 chr11 67378014 67378014 1 + C T SKCM 67378025 + 67378005 67378045 41 AAGCCCCGCCTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA AAGCCCCGCTTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA < 41bp 1 0.116993105750324 1 0.15353137254715 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378025 chr11:67378014 synonymous SNV . 0 10 hm5C_associated_SNPs_33935 0 0 5 DDX24 POSTAR2 ENCODE chr11:67377991-67378040
64251 chr3 130683792 130683792 1 + G A SKCM 130683793 + 130683773 130683813 41 TAATGATTTAATTCTTTAGGCTGCTGTAATGTGATTTGTTC TAATGATTTAATTCTTTAGACTGCTGTAATGTGATTTGTTC < 41bp 1 0.237936983463356 1 0.0694016516208649 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130683793 chr3:130683792 nonsynonymous SNV 0.858 5 20 hm5C_associated_SNPs_33938 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:130683782-130683814
64251 chr13 76414540 76414540 1 + C T SKCM 76414530 + 76414510 76414550 41 CTCTGATAACTGGTTAGCTTCCAGTTCCAACCATCAGTGCC CTCTGATAACTGGTTAGCTTCCAGTTCCAATCATCAGTGCC < 41bp 1 0.176134073832388 1 0.061181366443634 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76414530 chr13:76414540 nonsynonymous SNV 0.994 4 31 hm5C_associated_SNPs_33939 0 0 3 BUD13 POSTAR2 ENCODE chr13:76414517-76414642
64251 chr2 3628396 3628396 1 + T C SKCM 3628408 + 3628388 3628428 41 CTTGTAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCA CTTGTAGGCTGAAACTTTTTCTGGTGTCTATAAGAAGCTCA < 41bp 1 0.717986962706261 1 0.238430142402649 experiment 0.564026074587477 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3628408 chr2:3628396 nonsynonymous SNV 0.991 2 9 hm5C_associated_SNPs_33940 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr2:3628215-3628402
64251 chr11 119170471 119170471 1 + C T SKCM 119170488 + 119170468 119170508 41 TCTCCTGCCCATGTAGCTACCTAGCACACCATCTCCCTGCT TCTTCTGCCCATGTAGCTACCTAGCACACCATCTCCCTGCT < 41bp 1 0.293989361208258 1 0.0367252230644226 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CBL ENSG00000110395 CDS Human protein_coding chr11:119170488 chr11:119170471 nonsynonymous SNV 0.992 2 4 hm5C_associated_SNPs_33941 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:119170440-119170477
64251 chr22 23596118 23596118 1 + G A SKCM 23596125 + 23596105 23596145 41 AGCAGCAAGGGCAGGGGCAGCCGGGATGCGCTGGTCTCGGG AGCAGCAAGGGCAAGGGCAGCCGGGATGCGCTGGTCTCGGG < 41bp 1 0.569924030605987 1 0.759303748607635 experiment 0.860151938788026 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23596125 chr22:23596118 nonsynonymous SNV 0.995 2 14 hm5C_associated_SNPs_33942 0 0 9 BUD13 POSTAR2 ENCODE chr22:23596072-23596157
64251 chr3 157841665 157841665 1 + C T SKCM 157841658 + 157841638 157841678 41 ATTATATTTTATTTCAGACGCAGGCATCGATCAAGCAGTAG ATTATATTTTATTTCAGACGCAGGCATTGATCAAGCAGTAG < 41bp 1 0.335689523701127 1 0.209890812635422 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841658 chr3:157841665 stopgain 0.997 1 28 hm5C_associated_SNPs_33943 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chrX 107911653 107911653 1 + C T SKCM 107911644 + 107911624 107911664 41 TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCT TTCACGGTTTCCCTGGTGTGCAGGGTCCCTCAGGCCCTCCT < 41bp 1 0.786978813133686 1 0.797834157943726 experiment 0.426042373732627 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107911644 chrX:107911653 nonsynonymous SNV 0.970 1 30 hm5C_associated_SNPs_33944 0 0 3 RPS3 POSTAR2 ENCODE chrX:107911625-107911683
64251 chr6 31599959 31599959 1 + G A SKCM 31599963 + 31599943 31599983 41 GGGGTGCCATCTCGCCGGGGCCGAGGAGGAGGGAGGCCCCC GGGGTGCCATCTCGCCAGGGCCGAGGAGGAGGGAGGCCCCC < 41bp 1 0.431994348367647 1 0.590671062469482 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599963 chr6:31599959 nonsynonymous SNV 0.113 4 17 hm5C_associated_SNPs_33945 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr6:31599924-31599977
64251 chr7 100777068 100777068 1 + G A SKCM 100777083 + 100777063 100777103 41 CTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATT CTTATAAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATT < 41bp 1 0.125103640555664 1 0.170665889978409 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777083 chr7:100777068 nonsynonymous SNV 0.895 2 6 hm5C_associated_SNPs_33946 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:100777040-100777080
64251 chr7 100777068 100777068 1 + G A SKCM 100777087 + 100777067 100777107 41 TGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGA TAAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGA < 41bp 1 0.469130279067054 1 0.566033244132996 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777087 chr7:100777068 nonsynonymous SNV 0.895 2 2 hm5C_associated_SNPs_33947 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:100777040-100777080
64251 chr4 113189382 113189382 1 + G A SKCM 113189402 + 113189382 113189422 41 GAAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCA AAAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCA < 41bp 1 0.356951139656783 1 0.0677743256092072 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP1AR ENSG00000138660 CDS Human protein_coding chr4:113189402 chr4:113189382 synonymous SNV . 0 1 hm5C_associated_SNPs_33948 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:113189335-113189382
64251 chr7 128845608 128845608 1 + G A SKCM 128845621 + 128845601 128845641 41 ACCATGAGGCTTGGGGAGCCCACGTAGGTGTCTTGGGGACC ACCATGAAGCTTGGGGAGCCCACGTAGGTGTCTTGGGGACC < 41bp 1 0.60288699967925 1 0.559057116508484 experiment 0.794226000641499 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMO ENSG00000128602 CDS Human protein_coding chr7:128845621 chr7:128845608 nonsynonymous SNV 0.995 4 8 hm5C_associated_SNPs_33949 0 0 1 PPIG POSTAR2 ENCODE chr7:128845571-128845622
64251 chr5 179143235 179143235 1 + C T SKCM 179143220 + 179143200 179143240 41 TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGG TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCTCGAGG < 41bp 1 0.747935730839343 1 0.693824589252472 experiment 0.504128538321315 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179143220 chr5:179143235 nonsynonymous SNV 0.992 4 36 hm5C_associated_SNPs_33950 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179143107-179143246
64251 chr1 116206830 116206830 1 + G A SKCM 116206847 + 116206827 116206867 41 CACGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCCGCT CACACTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCCGCT < 41bp 1 0.188043904335444 1 0.0487476289272308 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VANGL1 ENSG00000173218 CDS Human protein_coding chr1:116206847 chr1:116206830 synonymous SNV . 0 4 hm5C_associated_SNPs_33951 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:116206792-116206839
64251 chr6 35423814 35423814 1 + C T SKCM 35423816 + 35423796 35423836 41 GGGGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAA GGGGCAGGAGGTTGAAATTCCCCCAGGCTCCAGACCCTGAA < 41bp 1 0.641518007068085 1 0.228030234575272 experiment 0.71696398586383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423816 chr6:35423814 nonsynonymous SNV 0.089 0 19 hm5C_associated_SNPs_33952 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423814 35423814 1 + C T SKCM 35423818 + 35423798 35423838 41 GGCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGA GGCAGGAGGTTGAAATTCCCCCAGGCTCCAGACCCTGAAGA < 41bp 1 0.555532619169907 1 0.72821706533432 experiment 0.888934761660186 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423818 chr6:35423814 nonsynonymous SNV 0.089 0 17 hm5C_associated_SNPs_33953 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr6 35423814 35423814 1 + C T SKCM 35423819 + 35423799 35423839 41 GCAGGAGGTTGAAATCCCCCCAGGCTCCAGACCCTGAAGAA GCAGGAGGTTGAAATTCCCCCAGGCTCCAGACCCTGAAGAA < 41bp 1 0.544103058785363 1 0.716412901878357 experiment 0.911793882429273 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FANCE ENSG00000112039 CDS Human protein_coding chr6:35423819 chr6:35423814 nonsynonymous SNV 0.089 0 16 hm5C_associated_SNPs_33954 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:35423800-35423820
64251 chr7 2686498 2686498 1 + C T SKCM 2686507 + 2686487 2686527 41 GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCGC GCCCTGCTGCTTCTGGGGGCCGCCGCCCTGGCCTGCCTCGC < 41bp 1 0.509663825739108 1 0.742795765399933 experiment 0.980672348521784 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686507 chr7:2686498 synonymous SNV . 0 12 hm5C_associated_SNPs_33955 0 0 3 DDX3X POSTAR2 ENCODE chr7:2686485-2686540
64251 chrX 73043377 73043377 1 - G A SKCM 73043361 - 73043341 73043381 41 GATTCATTTGATAAACAAAGCATCTTTTATGTGGAATATAC GATTTATTTGATAAACAAAGCATCTTTTATGTGGAATATAC < 41bp 1 0.0416890084564343 1 0.0693128407001495 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043361 chrX:73043377 . . 0 5 hm5C_associated_SNPs_33956 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr17 17697984 17697984 1 + C T SKCM 17698000 + 17697980 17698020 41 AGAGCCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG AGAGTCTACACGGCAGTCTGCCGCTCGACAGCTTCTCCAAG < 41bp 1 0.0604819996516289 1 0.0148311853408813 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698000 chr17:17697984 synonymous SNV . 0 5 hm5C_associated_SNPs_33959 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:17697929-17697992
64251 chr20 10023936 10023936 1 + G A SKCM 10023948 + 10023928 10023968 41 ACATTTTTGGAAAAAGGAGCCAATCCTAATGCAATCAACTC ACATTTTTAGAAAAAGGAGCCAATCCTAATGCAATCAACTC < 41bp 1 0.0498960353505179 1 0.144399076700211 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10023948 chr20:10023936 synonymous SNV . 0 9 hm5C_associated_SNPs_33960 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:10023916-10023946
64251 chr22 24560519 24560519 1 + C T SKCM 24560499 + 24560479 24560519 41 AGCACCCTGCTGAAGGTGTCCTCCATGCTTCAGCGGACCCC AGCACCCTGCTGAAGGTGTCCTCCATGCTTCAGCGGACCCT < 41bp 1 0.727018232049539 1 0.926698923110962 experiment 0.545963535900922 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24560499 chr22:24560519 nonsynonymous SNV 0.998 4 41 hm5C_associated_SNPs_33961 0 0 1 EIF3H POSTAR2 ENCODE chr22:24560508-24560527
64251 chr13 49765166 49765166 1 + C T SKCM 49765179 + 49765159 49765199 41 ATCTTTACTTGTGCAGACTCCAGCTGTGCCTCCTGGCCCAT ATCTTTATTTGTGCAGACTCCAGCTGTGCCTCCTGGCCCAT < 41bp 1 0.685406699615695 1 0.355266720056534 experiment 0.629186600768611 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49765179 chr13:49765166 nonsynonymous SNV 0.998 1 8 hm5C_associated_SNPs_33963 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:49765148-49765187
64251 chr2 47205970 47205970 1 + C T SKCM 47205958 + 47205938 47205978 41 ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT ATAACAGCACGTCGAGGCATCTGAAAGGCTGTTACCCGCTT < 41bp 1 0.585549089421192 1 0.8039910197258 experiment 0.828901821157615 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47205958 chr2:47205970 nonsynonymous SNV 0.005 0 33 hm5C_associated_SNPs_33966 0 0 2 PPIG POSTAR2 ENCODE chr2:47205961-47206048
64251 chr4 106861775 106861775 1 + G A SKCM 106861769 + 106861749 106861789 41 GCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT GCAAATGTAAAGAAGGATACCAGGGTAATGGACTGACTTGT < 41bp 1 0.781899449175037 1 0.793399453163147 experiment 0.436201101649926 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPNT ENSG00000168743 CDS Human protein_coding chr4:106861769 chr4:106861775 nonsynonymous SNV 0.810 1 27 hm5C_associated_SNPs_33967 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:106861761-106861783
64251 chr7 97833460 97833460 1 + C T SKCM 97833471 + 97833451 97833491 41 CCAGCTTTTCCCTCACACACCTGACCGACTCGGACATCGAG CCAGCTTTTTCCTCACACACCTGACCGACTCGGACATCGAG < 41bp 1 0.146134928194671 1 0.0609550476074219 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833471 chr7:97833460 nonsynonymous SNV 0.898 5 10 hm5C_associated_SNPs_33968 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:97833419-97833467
64251 chr19 40711940 40711940 1 + G A SKCM 40711941 + 40711921 40711961 41 TGGACATCGTGGAACGGGAGCTGCACCTGCTCATGTGCCAG TGGACATCGTGGAACGGGAACTGCACCTGCTCATGTGCCAG < 41bp 1 0.437926954085065 1 0.147610574960709 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40711941 chr19:40711940 synonymous SNV . 0 20 hm5C_associated_SNPs_33970 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:40711918-40711940
64251 chr17 80529642 80529642 1 + C T SKCM 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CGCCTTACTCCTACGCGCAGCTGATAGTTTAGGCGATTACG < 41bp 1 0.0698534956545277 1 0.0646834671497345 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529642 stopgain 0.506 1 30 hm5C_associated_SNPs_33971 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:80529622-80529666
64251 chr16 1250394 1250394 1 + C T SKCM 1250401 + 1250381 1250421 41 AGCTGCGCATGCCCTGCACCCTGGGCTGGGAGGCCTACACG AGCTGCGCATGCCTTGCACCCTGGGCTGGGAGGCCTACACG < 41bp 1 0.792407709462236 1 0.798925757408142 experiment 0.415184581075528 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CACNA1H ENSG00000196557 CDS Human protein_coding chr16:1250401 chr16:1250394 synonymous SNV . 0 14 hm5C_associated_SNPs_33972 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:1250352-1250396
64251 chr17 79408918 79408918 1 + C T SKCM 79408935 + 79408915 79408955 41 CTTCCCCAGCGTGGCCCGGGCCGCCCCTGCCCACCCCATGG CTTTCCCAGCGTGGCCCGGGCCGCCCCTGCCCACCCCATGG < 41bp 1 0.105596827057525 1 0.0940468907356262 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79408935 chr17:79408918 synonymous SNV . 0 4 hm5C_associated_SNPs_33973 0 0 1 METAP2 POSTAR2 ENCODE chr17:79408885-79409026
64251 chr7 16823074 16823074 1 + G A SKCM 16823094 + 16823074 16823114 41 GAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT AAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT < 41bp 1 0.168654663799553 1 0.0892886519432068 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823094 chr7:16823074 synonymous SNV . 0 1 hm5C_associated_SNPs_33974 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr7:16823039-16823074
64251 chr2 39009027 39009027 1 + C T SKCM 39009029 + 39009009 39009049 41 AAGGACATCTTACAGCTTCCCAATGAGAGGCCAGGAAGTGT AAGGACATCTTACAGCTTTCCAATGAGAGGCCAGGAAGTGT < 41bp 1 0.233936851164363 1 0.344755589962006 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39009029 chr2:39009027 nonsynonymous SNV 0.982 1 19 hm5C_associated_SNPs_33975 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:39008981-39009043
64251 chr2 47221609 47221609 1 + C T SKCM 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC CATGGGCAAGGAGGAGAGTTCTTTTGCCACTCAGGCCCTGC < 41bp 1 0.108717843789682 1 0.029369592666626 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221609 synonymous SNV . 0 25 hm5C_associated_SNPs_33976 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chrX 73043728 73043728 1 - C T SKCM 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTCGGAACTACATGCCCTAGAATATAAAAATGATGTT < 41bp 1 0.432335514242337 1 0.459568977355957 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043728 . . 0 25 hm5C_associated_SNPs_33977 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043728 73043728 1 - C T SKCM 73043738 - 73043718 73043758 41 TTCTGTGGGGCTCGGAACTACATGCCCTAGGATATAAAAAT TTCTGTGGGGCTCGGAACTACATGCCCTAGAATATAAAAAT < 41bp 1 0.0640935391313685 1 0.249246180057526 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043738 chrX:73043728 . . 0 31 hm5C_associated_SNPs_33978 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043728 73043728 1 - C T SKCM 73043746 - 73043726 73043766 41 TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGGAT TGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGAAT < 41bp 1 0.273857279965148 1 0.71929669380188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043746 chrX:73043728 . . 0 39 hm5C_associated_SNPs_33979 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043728 73043728 1 - C T SKCM 73043748 - 73043728 73043768 41 GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGG GGTGATTACTTTCTGTGGGGCTCGGAACTACATGCCCTAGA < 41bp 1 0.268521224283961 1 0.254167795181274 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043748 chrX:73043728 . . 0 41 hm5C_associated_SNPs_33980 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr4 3319348 3319348 1 + C T SKCM 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGTCCGGACCCCGAAGGGAGCCTCCCATTTGAGGCCGCTCA < 41bp 1 0.0399014994317293 1 0.174625664949417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319348 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_33981 0 0 1 BUD13 POSTAR2 ENCODE chr4:3319341-3319401
64251 chr11 46747445 46747445 1 + C T SKCM 46747436 + 46747416 46747456 41 TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCA TCAAGTCACTGTAGCGATGACTCCACGCTTCGAAGGCTCCA < 41bp 1 0.664527436758067 1 0.94365006685257 experiment 0.670945126483867 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control F2 ENSG00000180210 CDS Human protein_coding chr11:46747436 chr11:46747445 nonsynonymous SNV 0.084 2 30 hm5C_associated_SNPs_33982 0 0 1 SND1 POSTAR2 ENCODE chr11:46747442-46747459
64251 chr9 131830564 131830564 1 + C T SKCM 131830576 + 131830556 131830596 41 CCTCGGTGCTCGCCGTCCTGCGGAACCGCTGGCTGTCAGAC CCTCGGTGTTCGCCGTCCTGCGGAACCGCTGGCTGTCAGAC < 41bp 1 0.708469380777103 1 0.664179980754852 experiment 0.583061238445794 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MIGA2 ENSG00000148343 CDS Human protein_coding chr9:131830576 chr9:131830564 nonsynonymous SNV 0.927 2 9 hm5C_associated_SNPs_33984 0 0 7 DDX24 POSTAR2 ENCODE chr9:131830553-131830596
64251 chr6 31598926 31598926 1 + C T SKCM 31598935 + 31598915 31598955 41 GGAGCGAGACTCCTCCAGTACCTCCCCCACCACCCTATCTG GGAGCGAGACTTCTCCAGTACCTCCCCCACCACCCTATCTG < 41bp 1 0.0968459152370032 1 0.0284353494644165 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598935 chr6:31598926 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_33985 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31598918-31598935
64251 chr6 31598926 31598926 1 + C T SKCM 31598940 + 31598920 31598960 41 GAGACTCCTCCAGTACCTCCCCCACCACCCTATCTGGCCAG GAGACTTCTCCAGTACCTCCCCCACCACCCTATCTGGCCAG < 41bp 1 0.143811954540788 1 0.512734532356262 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31598940 chr6:31598926 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_33986 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31598918-31598935
64251 chr18 8819049 8819049 1 + G T SKCM 8819061 + 8819041 8819081 41 CCAGGGAAGCCTCCGCATGCCCCGTCCAGTGGCCATGTGGC CCAGGGAATCCTCCGCATGCCCCGTCCAGTGGCCATGTGGC < 41bp 1 0.147510618399139 1 0.0517077147960663 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8819061 chr18:8819049 nonsynonymous SNV 0.043 1 9 hm5C_associated_SNPs_33987 0 0 1 DDX24 POSTAR2 ENCODE chr18:8818954-8819052
64251 chr4 3319347 3319347 1 + C T SKCM 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGTCCGGACCCCGAAGGGAGCTCCCCATTTGAGGCCGCTCA < 41bp 1 0.221146034997052 1 0.184641361236572 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319347 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_33988 0 0 1 BUD13 POSTAR2 ENCODE chr4:3319341-3319401
64251 chr1 156106056 156106056 1 + C T SKCM 156106055 + 156106035 156106075 41 GCGCAGCCGTGGCCGTGCTTCCTCTCACTCATCCCAGACAC GCGCAGCCGTGGCCGTGCTTCTTCTCACTCATCCCAGACAC < 41bp 1 0.437008659685853 1 0.200363159179688 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156106055 chr1:156106056 synonymous SNV . 0 22 hm5C_associated_SNPs_33992 1 0 9 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:156106046-156106071
64251 chr19 1496322 1496322 1 + G A SKCM 1496319 + 1496299 1496339 41 TTCTGCATGGCTCCCAGGCCCTGGAACGGGGCTCTCATGCT TTCTGCATGGCTCCCAGGCCCTGAAACGGGGCTCTCATGCT < 41bp 1 0.721866328389249 1 0.294686496257782 experiment 0.556267343221503 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control REEP6 ENSG00000115255 CDS Human protein_coding chr19:1496319 chr19:1496322 stopgain 0.047 0 24 hm5C_associated_SNPs_33994 0 0 4 RPS3 POSTAR2 ENCODE chr19:1496289-1496358
64251 chr14 103805664 103805664 1 + C T SKCM 103805668 + 103805648 103805688 41 AATACAGGCGCCATTTCCTACGAGTAAGCAAAGTGCTCTGG AATACAGGCGCCATTTTCTACGAGTAAGCAAAGTGCTCTGG < 41bp 1 0.532707989581787 1 0.249754041433334 experiment 0.934584020836427 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805668 chr14:103805664 synonymous SNV . 0 17 hm5C_associated_SNPs_33995 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805506-103805667
64251 chr1 235600750 235600750 1 + C T SKCM 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTATTGCCAGCATTGGC < 41bp 1 0.563159883099531 1 0.097840815782547 experiment 0.873680233800938 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600750 synonymous SNV . 0 29 hm5C_associated_SNPs_33997 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr7 44684995 44684995 1 + C T SKCM 44685003 + 44684983 44685023 41 CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGT CAGAGTCCCCTTTCCCTGAGCCGAGGCTCCCTGGCTGCTGT < 41bp 1 0.273149110897166 1 0.524274468421936 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44685003 chr7:44684995 nonsynonymous SNV 0.995 0 13 hm5C_associated_SNPs_33998 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:44684977-44685000
64251 chr5 167920929 167920929 1 + C T SKCM 167920910 + 167920890 167920930 41 GTGTTGTAGATGCTCAAAACCAAGGAACAGAAAGTTAATCC GTGTTGTAGATGCTCAAAACCAAGGAACAGAAAGTTAATTC < 41bp 1 0.695456744277732 1 0.439833641052246 experiment 0.609086511444535 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167920910 chr5:167920929 nonsynonymous SNV 0.998 5 40 hm5C_associated_SNPs_34001 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167920826-167920970
64251 chr1 158063217 158063217 1 + C T SKCM 158063221 + 158063201 158063241 41 CCTTGGTATTCTTCCTCTACCGGCGCCGCAAAGGCAGTGAG CCTTGGTATTCTTCCTTTACCGGCGCCGCAAAGGCAGTGAG < 41bp 1 0.703647511993269 1 0.489560037851334 experiment 0.592704976013463 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIRREL ENSG00000183853 CDS Human protein_coding chr1:158063221 chr1:158063217 synonymous SNV . 0 17 hm5C_associated_SNPs_34002 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158063174-158063221
64251 chr11 46747446 46747446 1 + C T SKCM 46747436 + 46747416 46747456 41 TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCA TCAAGTCACTGTAGCGATGACTCCACGCTCTGAAGGCTCCA < 41bp 1 0.645323345234181 1 0.964965760707855 experiment 0.709353309531638 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control F2 ENSG00000180210 CDS Human protein_coding chr11:46747436 chr11:46747446 synonymous SNV . 0 31 hm5C_associated_SNPs_34003 0 0 1 SND1 POSTAR2 ENCODE chr11:46747442-46747459
64251 chr6 36106517 36106517 1 + G A SKCM 36106530 + 36106510 36106550 41 CCCCCAGGAAGGATTTCACTCAGCTGTTCCCACGGGCCAGC CCCCCAGAAAGGATTTCACTCAGCTGTTCCCACGGGCCAGC < 41bp 1 0.792562035227941 1 0.616380155086517 experiment 0.414875929544119 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAPK13 ENSG00000156711 CDS Human protein_coding chr6:36106530 chr6:36106517 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_34005 0 0 3 BUD13 POSTAR2 ENCODE chr6:36106472-36106560
64251 chr14 93299515 93299515 1 + C T SKCM 93299518 + 93299498 93299538 41 AGTCTGAGTTAGAAAATCGACTCCATCAGCTAACAGAGACT AGTCTGAGTTAGAAAATTGACTCCATCAGCTAACAGAGACT < 41bp 1 0.795696542422897 1 0.889821171760559 experiment 0.408606915154206 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299518 chr14:93299515 stopgain 0.744 0 18 hm5C_associated_SNPs_34006 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93299508-93299540
64251 chr4 141300281 141300281 1 + C T SKCM 141300277 + 141300257 141300297 41 GAATTTTTCTTATTGTAGACCATTCCTCAAGAATTTTGTAT GAATTTTTCTTATTGTAGACCATTTCTCAAGAATTTTGTAT < 41bp 1 0.033947382679409 1 0.0279330909252167 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCOC ENSG00000153130 CDS Human protein_coding chr4:141300277 chr4:141300281 nonsynonymous SNV 0.542 1 25 hm5C_associated_SNPs_34007 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:141300274-141300294
64251 chr3 47891189 47891189 1 + C T SKCM 47891200 + 47891180 47891220 41 CAGCGTCTTCGTCCGGGACTCCTCTCAGGTGCACCCGCTAG CAGCGTCTTTGTCCGGGACTCCTCTCAGGTGCACCCGCTAG < 41bp 1 0.104400967445977 1 0.0793721079826355 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47891200 chr3:47891189 synonymous SNV . 0 10 hm5C_associated_SNPs_34014 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:47891171-47891195
64251 chr19 10794135 10794135 1 + C T SKCM 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTCTCTGACACCCCTCTCGCCCTTG < 41bp 1 0.499048043502905 1 0.131685078144073 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794135 nonsynonymous SNV 0.308 1 20 hm5C_associated_SNPs_34015 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr19 10794135 10794135 1 + C T SKCM 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTCTCTGACACCCCTCTCGCCCTTGATGCCA < 41bp 1 0.190774464892581 1 0.0346224009990692 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794135 nonsynonymous SNV 0.308 1 14 hm5C_associated_SNPs_34016 0 0 34 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr13 115090566 115090566 1 + C T SKCM 115090577 + 115090557 115090597 41 CCAGTGTCTCCAGAGCTTCGCAAACCCGGCCCACCACTATC CCAGTGTCTTCAGAGCTTCGCAAACCCGGCCCACCACTATC < 41bp 1 0.251979804814682 1 0.184668123722076 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090577 chr13:115090566 nonsynonymous SNV 0.998 2 10 hm5C_associated_SNPs_34018 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr16 27374350 27374350 1 + C T SKCM 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCGAAATGTCCTTCAGCATGGGGCAGCTGCAGCC < 41bp 1 0.764998566048143 1 0.712714493274689 experiment 0.470002867903714 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374350 synonymous SNV . 0 20 hm5C_associated_SNPs_34019 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr9 21859395 21859395 1 + G A SKCM 21859391 + 21859371 21859411 41 ACCATACCTCAGATAGGGTCCACAGAATGGTCAGAAACCCT ACCATACCTCAGATAGGGTCCACAAAATGGTCAGAAACCCT < 41bp 1 0.391359415311062 1 0.405710607767105 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859391 chr9:21859395 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_34021 0 0 4 HNRNPU POSTAR2 GSE34491,GSM850170 chr9:21859380-21859400
64251 chr9 21859395 21859395 1 + G A SKCM 21859402 + 21859382 21859422 41 GATAGGGTCCACAGAATGGTCAGAAACCCTCCATAACCTGA GATAGGGTCCACAAAATGGTCAGAAACCCTCCATAACCTGA < 41bp 1 0.637145981377848 1 0.447366714477539 experiment 0.725708037244303 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859402 chr9:21859395 nonsynonymous SNV 0.991 1 14 hm5C_associated_SNPs_34022 0 0 4 HNRNPU POSTAR2 GSE34491,GSM850170 chr9:21859380-21859400
64251 chr22 35719864 35719864 1 + C T SKCM 35719884 + 35719864 35719904 41 CCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAA TCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAA < 41bp 1 0.179767225661516 1 0.0950077772140503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719884 chr22:35719864 nonsynonymous SNV 0.001 1 1 hm5C_associated_SNPs_34024 0 0 2 BUD13 POSTAR2 ENCODE chr22:35719749-35719864
64251 chr10 5147814 5147814 1 + G A SKCM 5147798 + 5147778 5147818 41 TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGAGGACAT TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGAGAACAT < 41bp 1 0.158565668674859 1 0.111565560102463 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5147798 chr10:5147814 nonsynonymous SNV 0.868 4 37 hm5C_associated_SNPs_34025 0 0 1 RPS3 POSTAR2 ENCODE chr10:5147789-5147850
64251 chr7 4002352 4002352 1 + C T SKCM 4002345 + 4002325 4002365 41 CCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG CCATCTCCATCAGCAGGCTCCAGAATCTTCGATACAAAGTG < 41bp 1 0.193049028747918 1 0.485606074333191 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SDK1 ENSG00000146555 CDS Human protein_coding chr7:4002345 chr7:4002352 nonsynonymous SNV 0.629 1 28 hm5C_associated_SNPs_34026 0 0 1 GRWD1 POSTAR2 ENCODE chr7:4002303-4002476
64251 chrX 70516801 70516801 1 + G A SKCM 70516804 + 70516784 70516824 41 TGGAGAAGCAGCAGCAGGACCAAGTGGACCGCAACATCAAG TGGAGAAGCAGCAGCAGAACCAAGTGGACCGCAACATCAAG < 41bp 1 0.700278091180711 1 0.761848211288452 experiment 0.599443817638577 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516804 chrX:70516801 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_34028 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516801 70516801 1 + G A SKCM 70516812 + 70516792 70516832 41 CAGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCG CAGCAGCAGAACCAAGTGGACCGCAACATCAAGGAGGCTCG < 41bp 1 0.524141697323555 1 0.192939043045044 experiment 0.95171660535289 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516812 chrX:70516801 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_34029 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516801 70516801 1 + G A SKCM 70516813 + 70516793 70516833 41 AGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCGT AGCAGCAGAACCAAGTGGACCGCAACATCAAGGAGGCTCGT < 41bp 1 0.646162586785877 1 0.49195584654808 experiment 0.707674826428246 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516813 chrX:70516801 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_34030 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chr11 75279845 75279845 1 + C T SKCM 75279855 + 75279835 75279875 41 CGGTCCTATACCGTGGGTGTCATGATGATGCACCGGACAGG CGGTCCTATATCGTGGGTGTCATGATGATGCACCGGACAGG < 41bp 1 0.579348888533251 1 0.227681159973145 experiment 0.841302222933499 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279855 chr11:75279845 nonsynonymous SNV 0.960 5 11 hm5C_associated_SNPs_34033 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:75279811-75279852
64251 chr10 5147813 5147813 1 + G C SKCM 5147798 + 5147778 5147818 41 TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGAGGACAT TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGACGACAT < 41bp 1 0.196784137824868 1 0.109783947467804 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5147798 chr10:5147813 nonsynonymous SNV 0.683 0 36 hm5C_associated_SNPs_34037 0 0 1 RPS3 POSTAR2 ENCODE chr10:5147789-5147850
64251 chr4 20568969 20568969 1 + C T SKCM 20568982 + 20568962 20569002 41 AGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGG AGTGATCTAGTTGACTTTTACCGATGCACCTGTCCATATGG < 41bp 1 0.130839043438747 1 0.525822341442108 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568982 chr4:20568969 nonsynonymous SNV 0.965 3 8 hm5C_associated_SNPs_34038 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr4 20568969 20568969 1 + C T SKCM 20568983 + 20568963 20569003 41 GTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGT GTGATCTAGTTGACTTTTACCGATGCACCTGTCCATATGGT < 41bp 1 0.134980955560538 1 0.736571907997131 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568983 chr4:20568969 nonsynonymous SNV 0.965 3 7 hm5C_associated_SNPs_34039 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr3 184106424 184106424 1 + G A SKCM 184106407 + 184106387 184106427 41 CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGGCCC CCCACCCCCAGCTGGGGGACCCCATGCAGGCTGATGGACCC < 41bp 1 0.194303008609276 1 0.19364395737648 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHRD ENSG00000090539 CDS Human protein_coding chr3:184106407 chr3:184106424 synonymous SNV . 0 38 hm5C_associated_SNPs_34040 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:184106409-184106439
64251 chr3 48506019 48506019 1 + C T SKCM 48506023 + 48506003 48506043 41 TTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC TTGGTGTGCAGAGCCCTTTGCCCCCAGTCACTGGCTCCAAC < 41bp 1 0.125795484128203 1 0.0327857732772827 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506023 chr3:48506019 synonymous SNV . 0 17 hm5C_associated_SNPs_34041 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506019 48506019 1 + C T SKCM 48506024 + 48506004 48506044 41 TGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACT TGGTGTGCAGAGCCCTTTGCCCCCAGTCACTGGCTCCAACT < 41bp 1 0.439540933114171 1 0.496870934963226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506024 chr3:48506019 synonymous SNV . 0 16 hm5C_associated_SNPs_34042 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506019 48506019 1 + C T SKCM 48506025 + 48506005 48506045 41 GGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTG GGTGTGCAGAGCCCTTTGCCCCCAGTCACTGGCTCCAACTG < 41bp 1 0.300737411004861 1 0.0565172135829926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506025 chr3:48506019 synonymous SNV . 0 15 hm5C_associated_SNPs_34043 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506019 48506019 1 + C T SKCM 48506026 + 48506006 48506046 41 GTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGC GTGTGCAGAGCCCTTTGCCCCCAGTCACTGGCTCCAACTGC < 41bp 1 0.294563117695977 1 0.151283591985703 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506026 chr3:48506019 synonymous SNV . 0 14 hm5C_associated_SNPs_34044 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506019 48506019 1 + C T SKCM 48506027 + 48506007 48506047 41 TGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCC TGTGCAGAGCCCTTTGCCCCCAGTCACTGGCTCCAACTGCC < 41bp 1 0.251420804076514 1 0.160490572452545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506027 chr3:48506019 synonymous SNV . 0 13 hm5C_associated_SNPs_34045 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr10 17271961 17271961 1 + G A SKCM 17271952 + 17271932 17271972 41 GTCGAGGTGGAGCGCGACAACCTGGCCGAGGACATCATGCG GTCGAGGTGGAGCGCGACAACCTGGCCGAAGACATCATGCG < 41bp 1 0.446413730420147 1 0.416986048221588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271952 chr10:17271961 synonymous SNV . 0 30 hm5C_associated_SNPs_34046 0 0 13 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr10:17271920-17271967
64251 chr19 34302347 34302347 1 + C T SKCM 34302343 + 34302323 34302363 41 AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGT AAGGCCCTCATCGAGGAGGTCTTCTCCGAGACCGGAGACGT < 41bp 1 0.137928760160113 1 0.0426745414733887 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302343 chr19:34302347 nonsynonymous SNV 0.980 3 25 hm5C_associated_SNPs_34047 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34302315-34302352
64251 chr2 47221585 47221585 1 + C T SKCM 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC TATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC < 41bp 1 0.0801956004245774 1 0.0227203965187073 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221585 synonymous SNV . 0 1 hm5C_associated_SNPs_34048 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chr3 48506018 48506018 1 + C T SKCM 48506023 + 48506003 48506043 41 TTGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAAC TTGGTGTGCAGAGCCTCTTGCCCCCAGTCACTGGCTCCAAC < 41bp 1 0.109880533994169 1 0.0394130945205688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506023 chr3:48506018 nonsynonymous SNV 0.658 1 16 hm5C_associated_SNPs_34049 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506018 48506018 1 + C T SKCM 48506024 + 48506004 48506044 41 TGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACT TGGTGTGCAGAGCCTCTTGCCCCCAGTCACTGGCTCCAACT < 41bp 1 0.414677780624613 1 0.314454078674316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506024 chr3:48506018 nonsynonymous SNV 0.658 1 15 hm5C_associated_SNPs_34050 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506018 48506018 1 + C T SKCM 48506025 + 48506005 48506045 41 GGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTG GGTGTGCAGAGCCTCTTGCCCCCAGTCACTGGCTCCAACTG < 41bp 1 0.296349018965909 1 0.051773726940155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506025 chr3:48506018 nonsynonymous SNV 0.658 1 14 hm5C_associated_SNPs_34051 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506018 48506018 1 + C T SKCM 48506026 + 48506006 48506046 41 GTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGC GTGTGCAGAGCCTCTTGCCCCCAGTCACTGGCTCCAACTGC < 41bp 1 0.2895136515047 1 0.130939483642578 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506026 chr3:48506018 nonsynonymous SNV 0.658 1 13 hm5C_associated_SNPs_34052 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506018 48506018 1 + C T SKCM 48506027 + 48506007 48506047 41 TGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCC TGTGCAGAGCCTCTTGCCCCCAGTCACTGGCTCCAACTGCC < 41bp 1 0.227240150016027 1 0.115539371967316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506027 chr3:48506018 nonsynonymous SNV 0.658 1 12 hm5C_associated_SNPs_34053 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr1 16257964 16257964 1 + C T SKCM 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCTCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG < 41bp 1 0.243279031614794 1 0.0915248990058899 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257964 synonymous SNV . 0 6 hm5C_associated_SNPs_34054 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:16257874-16257989
64251 chr5 36985776 36985776 1 + C T SKCM 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGTGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.140721171133601 1 0.0675322413444519 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985776 stopgain 1.000 1 6 hm5C_associated_SNPs_34055 1 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:36985753-36985779
64251 chr3 126724987 126724987 1 + G A SKCM 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGAACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC < 41bp 1 0.284389522948544 1 0.161382675170898 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126724987 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_34056 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:126724978-126725006
64251 chr16 5127990 5127990 1 + G A SKCM 5128001 + 5127981 5128021 41 ATGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA ATGAAGCTGAGCAGCATGCACTCTCCGTTCAGGGCCCGGTA < 41bp 1 0.300701779279413 1 0.0516793727874756 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128001 chr16:5127990 nonsynonymous SNV 0.487 1 10 hm5C_associated_SNPs_34059 0 0 3 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr1 151006421 151006421 1 + C T SKCM 151006407 + 151006387 151006427 41 TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGTCCTGTC < 41bp 1 0.149535552085959 1 0.0640812814235687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006407 chr1:151006421 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_34060 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:151006420-151006440
64251 chr13 48936978 48936978 1 + C G SKCM 48936995 + 48936975 48937015 41 GTTCACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCA GTTGACCTCGAACACCCAGGCGAGGTCAGAACAGGAGTGCA < 41bp 1 0.640872638712994 1 0.834452927112579 experiment 0.718254722574012 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RB1 ENSG00000139687 CDS Human protein_coding chr13:48936995 chr13:48936978 stopgain 1.000 1 4 hm5C_associated_SNPs_34061 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr13:48936960-48936980
64251 chr3 50131270 50131270 1 + A T SKCM 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCTTGCTGCGCGGCCTTCCCAT < 41bp 1 0.451765629602454 1 0.150620222091675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131270 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_34062 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50131200-50131280
64251 chr16 2577838 2577838 1 + C T SKCM 2577853 + 2577833 2577873 41 CACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT CACCTTCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT < 41bp 1 0.124460144750119 1 0.0943412482738495 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577853 chr16:2577838 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_34063 0 0 2 AARS POSTAR2 ENCODE chr16:2577819-2577864
64251 chr17 38512373 38512373 1 + G C SKCM 38512361 + 38512341 38512381 41 GAGGGCCTGGACACTCTGAGCGGACAGCCGGGGGGTGGGGG GAGGGCCTGGACACTCTGAGCGGACAGCCGGGCGGTGGGGG < 41bp 1 0.363955829230059 1 0.768040537834167 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RARA ENSG00000131759 CDS Human protein_coding chr17:38512361 chr17:38512373 synonymous SNV . 0 33 hm5C_associated_SNPs_34064 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:38512323-38512384
64251 chr7 94293208 94293208 1 + G A SKCM 94293216 + 94293196 94293236 41 GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG GATTTCTCAGTTAATCGTGTCCGTGTCTGCTTCGTGACAAG < 41bp 1 0.141729412846132 1 0.039812833070755 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293216 chr7:94293208 nonsynonymous SNV 0.713 2 13 hm5C_associated_SNPs_34065 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94293155-94293231
64251 chr3 50131271 50131271 1 + T G SKCM 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCAGGCTGCGCGGCCTTCCCAT < 41bp 1 0.764676275828803 1 0.933542013168335 experiment 0.470647448342395 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131271 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_34066 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50131200-50131280
64251 chr17 81042985 81042985 1 + C T SKCM 81042993 + 81042973 81043013 41 CTTCACGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAA CTTCACGGACTCTTCGGGGGCCAATATTTATTTGGAAAAAA < 41bp 1 0.0395490661626299 1 0.0682787001132965 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METRNL ENSG00000176845 CDS Human protein_coding chr17:81042993 chr17:81042985 synonymous SNV . 0 13 hm5C_associated_SNPs_34067 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:81042914-81042985
64251 chr1 43296183 43296183 1 + C T SKCM 43296173 + 43296153 43296193 41 TCTGGCTGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGT TCTGGCTGCCTCATCCCTCTCGTCTTCCTCTGGCTGTCTGT < 41bp 1 0.251838778690441 1 0.146227568387985 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ERMAP ENSG00000164010 CDS Human protein_coding chr1:43296173 chr1:43296183 nonsynonymous SNV 0.001 1 31 hm5C_associated_SNPs_34077 0 0 3 BUD13 POSTAR2 ENCODE chr1:43296154-43296258
64251 chr1 46739339 46739339 1 + C T SKCM 46739322 + 46739302 46739342 41 TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGCCGT TGCTGGTCCTGGATTATATTCTGGCGGTGACCCGAAGTCGT < 41bp 1 0.645406553631365 1 0.39920973777771 experiment 0.709186892737271 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739322 chr1:46739339 synonymous SNV . 0 38 hm5C_associated_SNPs_34078 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:46739299-46739346
64251 chr1 43296182 43296182 1 + C T SKCM 43296173 + 43296153 43296193 41 TCTGGCTGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGT TCTGGCTGCCTCATCCCTCTCGTCTTCCTTCGGCTGTCTGT < 41bp 1 0.272829322000439 1 0.102446526288986 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ERMAP ENSG00000164010 CDS Human protein_coding chr1:43296173 chr1:43296182 synonymous SNV . 0 30 hm5C_associated_SNPs_34079 0 0 3 BUD13 POSTAR2 ENCODE chr1:43296154-43296258
64251 chr22 24466776 24466776 1 + A T SKCM 24466762 + 24466742 24466782 41 CTGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCA CTGTACTAGGACTCCTTGCTCCGGCTGAAGGACTTTCGGCA < 41bp 1 0.219149212181277 1 0.900994300842285 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466762 chr22:24466776 nonsynonymous SNV 0.503 0 35 hm5C_associated_SNPs_34080 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr22 24466776 24466776 1 + A T SKCM 24466763 + 24466743 24466783 41 TGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAG TGTACTAGGACTCCTTGCTCCGGCTGAAGGACTTTCGGCAG < 41bp 1 0.458766861057158 1 0.572164535522461 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466763 chr22:24466776 nonsynonymous SNV 0.503 0 34 hm5C_associated_SNPs_34081 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr22 24466776 24466776 1 + A T SKCM 24466766 + 24466746 24466786 41 ACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAGTGT ACTAGGACTCCTTGCTCCGGCTGAAGGACTTTCGGCAGTGT < 41bp 1 0.434439591648864 1 0.286427736282349 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466766 chr22:24466776 nonsynonymous SNV 0.503 0 31 hm5C_associated_SNPs_34082 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr6 31727646 31727646 1 + T C SKCM 31727628 + 31727608 31727648 41 CACGAGCAGCTGTCTTAACCCGAGTATTGGACCTTGCCTCC CACGAGCAGCTGTCTTAACCCGAGTATTGGACCTTGCCCCC < 41bp 1 0.708446966411722 1 0.819210231304169 experiment 0.583106067176556 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31727628 chr6:31727646 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_34083 0 0 12 SRSF1 POSTAR2 GSE83923,GSM2221665 chr6:31727645-31727646
64251 chr16 15788051 15788051 1 + C T SKCM 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGGGGGACCCCCTTCACACCTGCGGCCCG < 41bp 1 0.246519635804988 1 0.057820737361908 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788051 nonsynonymous SNV 0.097 4 25 hm5C_associated_SNPs_34084 0 0 3 DDX24 POSTAR2 ENCODE chr16:15788032-15788113
64251 chr11 64802578 64802578 1 + C T SKCM 64802597 + 64802577 64802617 41 TCCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGAC TTCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGAC < 41bp 1 0.100294397351567 1 0.0644792318344116 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802597 chr11:64802578 synonymous SNV . 0 2 hm5C_associated_SNPs_34086 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802578 64802578 1 + C T SKCM 64802598 + 64802578 64802618 41 CCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACC TCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACC < 41bp 1 0.0878550197421637 1 0.121080577373505 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802598 chr11:64802578 synonymous SNV . 0 1 hm5C_associated_SNPs_34087 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr20 35857094 35857094 1 + C T SKCM 35857080 + 35857060 35857100 41 GATTGAATTTGACTCTGCCTCTGGCACCTACACTCTCTACT GATTGAATTTGACTCTGCCTCTGGCACCTACACTTTCTACT < 41bp 1 0.433344219304856 1 0.45099875330925 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35857080 chr20:35857094 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_34090 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:35856999-35857141
64251 chrX 19373831 19373831 1 + C A SKCM 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGCGTCAGAGAGGCAACAAGGTTTGCTGCTGCCT < 41bp 1 0.589452067598485 1 0.469660669565201 experiment 0.82109586480303 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373831 synonymous SNV . 0 14 hm5C_associated_SNPs_34091 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:19373807-19373834
64251 chr11 237091 237091 1 + C T SKCM 237088 + 237068 237108 41 TTCCTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGC TTCCTACAGCAGAGCCAGAACTCTGGGCCCGGGCAGCCCGC < 41bp 1 0.725402237860335 1 0.833425581455231 experiment 0.549195524279329 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:237088 chr11:237091 synonymous SNV . 0 24 hm5C_associated_SNPs_34092 0 0 8 DDX3X POSTAR2 ENCODE chr11:237063-237106
64251 chr10 105184854 105184854 1 + C T SKCM 105184840 + 105184820 105184860 41 GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTCAACGAC GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTTAACGAC < 41bp 1 0.276507023646092 1 0.155598878860474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105184840 chr10:105184854 synonymous SNV . 0 35 hm5C_associated_SNPs_34093 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:105184829-105184877
64251 chrX 23801995 23801995 1 + C T SKCM 23802013 + 23801993 23802033 41 TCCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA TCTGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA < 41bp 1 0.0364739384414354 1 0.0973440110683441 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066 CDS Human protein_coding chrX:23802013 chrX:23801995 nonsynonymous SNV 0.860 0 3 hm5C_associated_SNPs_34095 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chrX 23801995 23801995 1 + C T SKCM 23802014 + 23801994 23802034 41 CCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC CTGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC < 41bp 1 0.0377555207127546 1 0.0501357614994049 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066 CDS Human protein_coding chrX:23802014 chrX:23801995 nonsynonymous SNV 0.860 0 2 hm5C_associated_SNPs_34096 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chr7 98591321 98591321 1 + C T SKCM 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCATCGTTGATCAGATGGTCTGGTTCAGAGAA < 41bp 1 0.335637671082517 1 0.569168210029602 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591321 synonymous SNV . 0 17 hm5C_associated_SNPs_34097 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:98591303-98591322
64251 chr4 20555445 20555445 1 + C T SKCM 20555440 + 20555420 20555460 41 TTTTCCAGAGCAATTGGAGCCAACCCTCTTTACTGTGATTG TTTTCCAGAGCAATTGGAGCCAACCTTCTTTACTGTGATTG < 41bp 1 0.146756979504483 1 0.179114162921906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20555440 chr4:20555445 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_34098 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20555433-20555475
64251 chr17 78022406 78022406 1 + C T SKCM 78022426 + 78022406 78022446 41 CCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAG TCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAG < 41bp 1 0.283141677759086 1 0.048156350851059 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022426 chr17:78022406 nonsynonymous SNV 0.002 1 1 hm5C_associated_SNPs_34101 0 0 3 BUD13 POSTAR2 ENCODE chr17:78022361-78022423
64251 chr6 144782340 144782340 1 + G A SKCM 144782344 + 144782324 144782364 41 AATAAACAGAACTGAAGGGCCAACCTGGACATGCATATCTG AATAAACAGAACTGAAAGGCCAACCTGGACATGCATATCTG < 41bp 1 0.047108469658287 1 0.128912806510925 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:144782344 chr6:144782340 synonymous SNV . 0 17 hm5C_associated_SNPs_34102 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:144782335-144782373
64251 chr17 7318277 7318277 1 + C T SKCM 7318290 + 7318270 7318310 41 GCCAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCACCG GCCAGGGTTGTTCCAGAAGGCCATCGCCCAGAGTGGCACCG < 41bp 1 0.0349607656304412 1 0.206830054521561 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318290 chr17:7318277 synonymous SNV . 0 8 hm5C_associated_SNPs_34103 0 0 1 LSM11 POSTAR2 ENCODE chr17:7318275-7318309
64251 chrX 153608118 153608118 1 + C T SKCM 153608138 + 153608118 153608158 41 CCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA TCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA < 41bp 1 0.405643871829467 1 0.140454769134521 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608138 chrX:153608118 nonsynonymous SNV 0.137 1 1 hm5C_associated_SNPs_34104 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr3 47385188 47385188 1 + C T SKCM 47385197 + 47385177 47385217 41 CTCAGCATTGCCGAGATGTACAGCTCTGTGGCAGACCAGTG CTCAGCATTGCTGAGATGTACAGCTCTGTGGCAGACCAGTG < 41bp 1 0.422189095102477 1 0.0901167690753937 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385197 chr3:47385188 synonymous SNV . 0 12 hm5C_associated_SNPs_34105 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47385160-47385194
64251 chr19 14020750 14020750 1 + C T SKCM 14020742 + 14020722 14020762 41 GGCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCA GGCTTTGGTCGGGGGCCAGCCCCCAGCCTTGGAGAAGCTCA < 41bp 1 0.424890044253908 1 0.785475134849548 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020742 chr19:14020750 synonymous SNV . 0 29 hm5C_associated_SNPs_34106 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020750 14020750 1 + C T SKCM 14020743 + 14020723 14020763 41 GCTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAA GCTTTGGTCGGGGGCCAGCCCCCAGCCTTGGAGAAGCTCAA < 41bp 1 0.256021873361623 1 0.758546471595764 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020743 chr19:14020750 synonymous SNV . 0 28 hm5C_associated_SNPs_34107 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020750 14020750 1 + C T SKCM 14020744 + 14020724 14020764 41 CTTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAA CTTTGGTCGGGGGCCAGCCCCCAGCCTTGGAGAAGCTCAAA < 41bp 1 0.183239435409702 1 0.670407116413116 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020744 chr19:14020750 synonymous SNV . 0 27 hm5C_associated_SNPs_34108 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr19 14020750 14020750 1 + C T SKCM 14020745 + 14020725 14020765 41 TTTGGTCGGGGGCCAGCCCCCAGCCCTGGAGAAGCTCAAAG TTTGGTCGGGGGCCAGCCCCCAGCCTTGGAGAAGCTCAAAG < 41bp 1 0.524323730016332 1 0.788927674293518 experiment 0.951352539967335 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14020745 chr19:14020750 synonymous SNV . 0 26 hm5C_associated_SNPs_34109 0 0 6 BUD13 POSTAR2 ENCODE chr19:14020734-14020763
64251 chr5 14280513 14280513 1 + G A SKCM 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGAAGACTCATTTCCTATCTAGCCTGT < 41bp 1 0.327782187755033 1 0.182724982500076 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280513 synonymous SNV . 0 17 hm5C_associated_SNPs_34111 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr21 47769615 47769615 1 + G A SKCM 47769611 + 47769591 47769631 41 TTTCTAGGGGCCCTTAGGAACCTGGAGAGTCATCATCAAGC TTTCTAGGGGCCCTTAGGAACCTGAAGAGTCATCATCAAGC < 41bp 1 0.105745035748074 1 0.131559520959854 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47769611 chr21:47769615 nonsynonymous SNV 0.017 1 25 hm5C_associated_SNPs_34112 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:47769605-47769626
64251 chr16 24580568 24580568 1 + C T SKCM 24580557 + 24580537 24580577 41 TAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA TAAAGGTTATGCTGCTGGAGCACAGCCTAGATCCTCAGCAA < 41bp 1 0.302077854598751 1 0.359431266784668 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580557 chr16:24580568 nonsynonymous SNV 0.999 2 32 hm5C_associated_SNPs_34126 0 0 2 AARS POSTAR2 ENCODE chr16:24580531-24580593
64251 chr3 47385187 47385187 1 + C T SKCM 47385197 + 47385177 47385217 41 CTCAGCATTGCCGAGATGTACAGCTCTGTGGCAGACCAGTG CTCAGCATTGTCGAGATGTACAGCTCTGTGGCAGACCAGTG < 41bp 1 0.474005605435566 1 0.129011988639832 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385197 chr3:47385187 nonsynonymous SNV 0.839 1 11 hm5C_associated_SNPs_34130 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47385160-47385194
64251 chr20 4679899 4679899 1 + C T SKCM 4679908 + 4679888 4679928 41 ATGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGGGCCT ATGCTGGTTCTTTTTGTGGCCACATGGAGTGACCTGGGCCT < 41bp 1 0.5606560230855 1 0.674317479133606 experiment 0.878687953829 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4679908 chr20:4679899 synonymous SNV . 0 12 hm5C_associated_SNPs_34131 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:4679880-4679900
64251 chr2 29344298 29344298 1 + C T SKCM 29344282 + 29344262 29344302 41 TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTG TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCTTTTG < 41bp 1 0.0653890283109053 1 0.0650585293769836 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29344282 chr2:29344298 nonsynonymous SNV 0.642 1 37 hm5C_associated_SNPs_34132 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr2:29344280-29344300
64251 chr16 4727524 4727524 1 + T A SKCM 4727512 + 4727492 4727532 41 GGTGCGGAAGAAGCCAGGAGCCCTGTCCCCCGTGTCCTTCA GGTGCGGAAGAAGCCAGGAGCCCTGTCCCCCGAGTCCTTCA < 41bp 1 0.145627049015766 1 0.0706493258476257 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4727512 chr16:4727524 nonsynonymous SNV 0.976 2 33 hm5C_associated_SNPs_34133 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:4727524-4727525
64251 chr16 68373357 68373357 1 + C T SKCM 68373342 + 68373322 68373362 41 TGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTT TGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTTCCGTT < 41bp 1 0.552075252995821 1 0.498669892549515 experiment 0.895849494008358 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373342 chr16:68373357 nonsynonymous SNV 0.114 3 36 hm5C_associated_SNPs_34134 0 0 3 LIN28B POSTAR2 ENCODE chr16:68373297-68373388
64251 chr2 54872391 54872391 1 + G A SKCM 54872378 + 54872358 54872398 41 GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCGGAAGAAG GCCCTCAGATGCTGGAGAATCAGATGGAAGTGCAGAAGAAG < 41bp 1 0.349727074421277 1 0.802324831485748 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872378 chr2:54872391 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_34135 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:54872366-54872405
64251 chr17 7467091 7467091 1 + C T SKCM 7467100 + 7467080 7467120 41 TCCAAAGTCTCCTCTGGACCCTGACTCGGGTAAGGTGGGAA TCCAAAGTCTCTTCTGGACCCTGACTCGGGTAAGGTGGGAA < 41bp 1 0.341691220188211 1 0.0686002671718597 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SENP3 ENSG00000161956 CDS Human protein_coding chr17:7467100 chr17:7467091 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_34137 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7467054-7467092
64251 chr19 1912852 1912852 1 + C T SKCM 1912858 + 1912838 1912878 41 CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCG CTGCTCCTTCGCCCTGGCCGCTGCCCCCCAGGCCGTCCGCG < 41bp 1 0.119799637750048 1 0.108211904764175 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912858 chr19:1912852 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_34138 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:1912825-1912859
64251 chr1 57157079 57157079 1 + C T SKCM 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGTGATTAGCACTCCAACAGATTTTTTTAT < 41bp 1 0.0718620148204232 1 0.303920388221741 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157079 synonymous SNV . 0 18 hm5C_associated_SNPs_34140 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:57157066-57157093
64251 chr17 53852193 53852193 1 + G T SKCM 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTCGATAACCCGGGTGGCCAAATTCCTTCCTGGCTCATT < 41bp 1 0.291017633032734 1 0.187031686306 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852193 synonymous SNV . 0 29 hm5C_associated_SNPs_34143 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:53852170-53852193
64251 chr7 141341105 141341105 1 + C A SKCM 141341103 + 141341083 141341123 41 CACGGGACCTACAGAGAGACCTCCCAATGAACCAGAGGAGA CACGGGACCTACAGAGAGACCTACCAATGAACCAGAGGAGA < 41bp 1 0.231623335894974 1 0.0470375120639801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141341103 chr7:141341105 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_34144 0 0 1 ZNF622 POSTAR2 ENCODE chr7:141341045-141341149
64251 chr20 32217709 32217709 1 + C T SKCM 32217689 + 32217669 32217709 41 GAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGATTC GAGTTGGTCTCCAGGCAGCACAGCCCTGGGAGTGCAGATTT < 41bp 1 0.351875689352202 1 0.0469240248203278 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32217689 chr20:32217709 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_34145 0 0 2 BUD13 POSTAR2 ENCODE chr20:32217616-32217726
64251 chr9 134354730 134354730 1 + C T SKCM 134354717 + 134354697 134354737 41 AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCT AGAACAACTTATGTCTGGAGCAAGGTGACGTGATCGTGCCT < 41bp 1 0.319156567293777 1 0.769617795944214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354717 chr9:134354730 nonsynonymous SNV 0.161 1 34 hm5C_associated_SNPs_34146 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr9 134354730 134354730 1 + C T SKCM 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGATCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG < 41bp 1 0.31059577443875 1 0.607393383979797 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354730 nonsynonymous SNV 0.161 1 8 hm5C_associated_SNPs_34147 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr19 35501050 35501050 1 + C T SKCM 35501031 + 35501011 35501051 41 TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTCT TGCAGCGTGAGATCCTGCTCCAGGGCCGCCTCTACCTCTTT < 41bp 1 0.702883911400248 1 0.776303231716156 experiment 0.594232177199505 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501031 chr19:35501050 nonsynonymous SNV 0.817 5 40 hm5C_associated_SNPs_34153 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:35501040-35501055
64251 chr19 17836861 17836861 1 + C T SKCM 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CTCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT < 41bp 1 0.503909466463289 1 0.73726761341095 experiment 0.992181067073421 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836861 nonsynonymous SNV 0.132 3 2 hm5C_associated_SNPs_34156 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr11 8016890 8016890 1 + G A SKCM 8016893 + 8016873 8016913 41 GTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAA GTTCCCGATGACTTTGAAACCATGCTCAACAGCAACATCAA < 41bp 1 0.25846454027755 1 0.335493803024292 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3F ENSG00000175390 CDS Human protein_coding chr11:8016893 chr11:8016890 synonymous SNV . 0 18 hm5C_associated_SNPs_34157 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:8016872-8016903
64251 chr22 32270373 32270373 1 + G A SKCM 32270365 + 32270345 32270385 41 ACGTGGAGGGGATCCAGACACAGGCGATGGCCATTGACATC ACGTGGAGGGGATCCAGACACAGGCGATAGCCATTGACATC < 41bp 1 0.775151583004044 1 0.778709471225739 experiment 0.449696833991912 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32270365 chr22:32270373 nonsynonymous SNV 0.995 1 29 hm5C_associated_SNPs_34158 0 0 1 PRPF8 POSTAR2 ENCODE chr22:32270346-32270429
64251 chr18 74631830 74631830 1 + T C SKCM 74631822 + 74631802 74631842 41 CACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCC CACTTTCACGGAGGAGGAGACAGCCCAGCTAGCCAAGATCC < 41bp 1 0.354919924417819 1 0.27128392457962 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631822 chr18:74631830 synonymous SNV . 0 29 hm5C_associated_SNPs_34159 0 0 2 DDX24 POSTAR2 ENCODE chr18:74631797-74631850
64251 chr10 72324241 72324241 1 + C T SKCM 72324236 + 72324216 72324256 41 TACCTCCACCTGGAGAAGGCCGACTCCTGGCAGAGGCCCTT TACCTCCACCTGGAGAAGGCCGACTTCTGGCAGAGGCCCTT < 41bp 1 0.224445574180203 1 0.321542948484421 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control PALD1 ENSG00000107719 CDS Human protein_coding chr10:72324236 chr10:72324241 nonsynonymous SNV 0.920 2 26 hm5C_associated_SNPs_34160 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:72324237-72324264
64251 chr14 96998708 96998708 1 + C G SKCM 96998728 + 96998708 96998748 41 CATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTAT GATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTAT < 41bp 1 0.550250922616556 1 0.0676973164081573 experiment 0.899498154766888 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96998728 chr14:96998708 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_34161 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:96998680-96998720
64251 chr1 155279920 155279920 1 + C T SKCM 155279915 + 155279895 155279935 41 AAGCAGGATTTCGTTCAGCACTTCTCCCAGATCGTTAGGGT AAGCAGGATTTCGTTCAGCACTTCTTCCAGATCGTTAGGGT < 41bp 1 0.187800439062329 1 0.052276611328125 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155279915 chr1:155279920 nonsynonymous SNV 0.990 1 26 hm5C_associated_SNPs_34162 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:155279853-155279925
64251 chr6 7583110 7583110 1 + C T SKCM 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTTCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG < 41bp 1 0.072314323513885 1 0.0851112902164459 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583110 nonsynonymous SNV 0.997 3 6 hm5C_associated_SNPs_34163 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr21 46931086 46931086 1 + C T SKCM 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCTCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC < 41bp 1 0.0637310530629721 1 0.168604522943497 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931086 nonsynonymous SNV 0.025 0 3 hm5C_associated_SNPs_34164 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr21 46931086 46931086 1 + C T SKCM 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CTCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT < 41bp 1 0.0712427988009956 1 0.0420300662517548 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931086 nonsynonymous SNV 0.025 0 2 hm5C_associated_SNPs_34165 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr22 29695307 29695307 1 + C T SKCM 29695312 + 29695292 29695332 41 GCTTCCTCCCGCCACCCTTTCCGCCCCCGGGTAGGTGCAGG GCTTCCTCCCGCCACTCTTTCCGCCCCCGGGTAGGTGCAGG < 41bp 1 0.25101854107919 1 0.403990179300308 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695312 chr22:29695307 nonsynonymous SNV 0.989 2 16 hm5C_associated_SNPs_34166 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr22:29695305-29695332
64251 chr22 29695308 29695308 1 + C T SKCM 29695312 + 29695292 29695332 41 GCTTCCTCCCGCCACCCTTTCCGCCCCCGGGTAGGTGCAGG GCTTCCTCCCGCCACCTTTTCCGCCCCCGGGTAGGTGCAGG < 41bp 1 0.276835239177195 1 0.514437675476074 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695312 chr22:29695308 synonymous SNV . 0 17 hm5C_associated_SNPs_34167 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr22:29695305-29695332
64251 chr14 102449438 102449438 1 + G A SKCM 102449442 + 102449422 102449462 41 ATTTGCTGTCTGCCACGGAGCTGGACAAAATAAGACAGGCG ATTTGCTGTCTGCCACAGAGCTGGACAAAATAAGACAGGCG < 41bp 1 0.338729696072348 1 0.518049657344818 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102449442 chr14:102449438 synonymous SNV . 0 17 hm5C_associated_SNPs_34169 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102449360-102449486
64251 chr1 957749 957749 1 + C T SKCM 957744 + 957724 957764 41 CTTTGTGAACCCTGCACCCCCATACCTGTGGCCAGCCCACA CTTTGTGAACCCTGCACCCCCATACTTGTGGCCAGCCCACA < 41bp 1 0.0568435915073127 1 0.180506378412247 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957744 chr1:957749 synonymous SNV . 0 26 hm5C_associated_SNPs_34170 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:957740-957760
64251 chr15 64410335 64410335 1 + C T SKCM 64410330 + 64410310 64410350 41 TTTTAGATGCCACAGTGGAGCTATCCTTGGACAGCACACAA TTTTAGATGCCACAGTGGAGCTATCTTTGGACAGCACACAA < 41bp 1 0.0802428666518766 1 0.15072625875473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410330 chr15:64410335 synonymous SNV . 0 26 hm5C_associated_SNPs_34171 0 0 4 BUD13 POSTAR2 ENCODE chr15:64410314-64410361
64251 chr15 64410335 64410335 1 + C T SKCM 64410334 + 64410314 64410354 41 AGATGCCACAGTGGAGCTATCCTTGGACAGCACACAAAATA AGATGCCACAGTGGAGCTATCTTTGGACAGCACACAAAATA < 41bp 1 0.132906658636836 1 0.109082490205765 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410334 chr15:64410335 synonymous SNV . 0 22 hm5C_associated_SNPs_34172 0 0 4 BUD13 POSTAR2 ENCODE chr15:64410314-64410361
64251 chr19 24010066 24010066 1 + G A SKCM 24010069 + 24010049 24010089 41 ATCTTGACTTCCAGATGGAACACTACATCTATAAAAGGAAA ATCTTGACTTCCAGATGAAACACTACATCTATAAAAGGAAA < 41bp 1 0.429018667204558 1 0.439294844865799 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RPSAP58 ENSG00000205246 CDS Human other chr19:24010069 chr19:24010066 nonsynonymous SNV 0.956 0 18 hm5C_associated_SNPs_34173 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:24010060-24010100
64251 chr19 24010066 24010066 1 + G A SKCM 24010071 + 24010051 24010091 41 CTTGACTTCCAGATGGAACACTACATCTATAAAAGGAAAAG CTTGACTTCCAGATGAAACACTACATCTATAAAAGGAAAAG < 41bp 1 0.646996167125309 1 0.329265564680099 experiment 0.706007665749382 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RPSAP58 ENSG00000205246 CDS Human other chr19:24010071 chr19:24010066 nonsynonymous SNV 0.956 0 16 hm5C_associated_SNPs_34174 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:24010060-24010100
64251 chr19 58757775 58757775 1 + G A SKCM 58757778 + 58757758 58757798 41 TGACACTGGAGACCTGGGAGCATATTGTCTCCCTGGGTAAG TGACACTGGAGACCTGGAAGCATATTGTCTCCCTGGGTAAG < 41bp 1 0.266051540708633 1 0.0914899706840515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58757778 chr19:58757775 nonsynonymous SNV 0.013 0 18 hm5C_associated_SNPs_34182 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58757677-58757776
64251 chr22 30038261 30038261 1 + C T SKCM 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGTCGTCCAG < 41bp 1 0.670564613293675 1 0.535269141197205 experiment 0.658870773412651 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038261 nonsynonymous SNV 0.468 4 34 hm5C_associated_SNPs_34185 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:30038261-30038262
64251 chr17 40716061 40716061 1 + C T SKCM 40716079 + 40716059 40716099 41 TCCTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG TCTTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG < 41bp 1 0.248117056315784 1 0.158555448055267 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40716079 chr17:40716061 synonymous SNV . 0 3 hm5C_associated_SNPs_34186 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40715980-40716072
64251 chr17 78022434 78022434 1 + G A SKCM 78022426 + 78022406 78022446 41 CCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAG CCCACCCCAGGGAAGGAGACCTGCCAGTATTCCAGGACCAG < 41bp 1 0.268080173256399 1 0.0818988978862762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022426 chr17:78022434 synonymous SNV . 0 29 hm5C_associated_SNPs_34189 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:78022434-78022467
64251 chr17 78022435 78022435 1 + T A SKCM 78022426 + 78022406 78022446 41 CCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAG CCCACCCCAGGGAAGGAGACCTGCCAGTGATCCAGGACCAG < 41bp 1 0.317790736950279 1 0.0662164688110352 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022426 chr17:78022435 nonsynonymous SNV 0.002 0 30 hm5C_associated_SNPs_34190 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:78022434-78022467
64251 chrX 70516849 70516849 1 + G A SKCM 70516829 + 70516809 70516849 41 GGACCGCAACATCAAGGAGGCTCGTGAGAAGCTGGAGATGG GGACCGCAACATCAAGGAGGCTCGTGAGAAGCTGGAGATGA < 41bp 1 0.553191861570592 1 0.0905556678771973 experiment 0.893616276858815 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70516829 chrX:70516849 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_34191 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70516792-70516885
64251 chrX 70516849 70516849 1 + G A SKCM 70516866 + 70516846 70516886 41 ATGGAGATGGAAGCTGCACGCCATGAGCACCAGGTCATGCT ATGAAGATGGAAGCTGCACGCCATGAGCACCAGGTCATGCT < 41bp 1 0.234411241349378 1 0.166484981775284 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516866 chrX:70516849 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_34192 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70516792-70516885
64251 chr21 44324160 44324160 1 + C T SKCM 44324165 + 44324145 44324185 41 CCAGCGCAAGGCGGCCCCTCCCCTGCCCAGAAAGGAAACCT CCAGCGCAAGGCGGCTCCTCCCCTGCCCAGAAAGGAAACCT < 41bp 1 0.123684656677778 1 0.222821414470673 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324165 chr21:44324160 synonymous SNV . 0 16 hm5C_associated_SNPs_34194 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr21:44324160-44324161
64251 chr17 7318294 7318294 1 + C T SKCM 7318290 + 7318270 7318310 41 GCCAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCACCG GCCAGGGCTGTTCCAGAAGGCCATTGCCCAGAGTGGCACCG < 41bp 1 0.0451218509197455 1 0.0901640653610229 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318290 chr17:7318294 synonymous SNV . 0 25 hm5C_associated_SNPs_34195 0 0 1 LSM11 POSTAR2 ENCODE chr17:7318275-7318309
64251 chr7 44802542 44802542 1 + C T SKCM 44802539 + 44802519 44802559 41 GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT GTCCGCTCGGTGCTGCAGGGCCTTCTCAAAAAGCGCCTCCT < 41bp 1 0.0136210870526485 1 0.00858837366104126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802539 chr7:44802542 synonymous SNV . 0 24 hm5C_associated_SNPs_34196 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44802519-44802543
64251 chr21 44324161 44324161 1 + C T SKCM 44324165 + 44324145 44324185 41 CCAGCGCAAGGCGGCCCCTCCCCTGCCCAGAAAGGAAACCT CCAGCGCAAGGCGGCCTCTCCCCTGCCCAGAAAGGAAACCT < 41bp 1 0.135499382912665 1 0.320001542568207 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324165 chr21:44324161 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_34197 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr21:44324160-44324161
64251 chr6 158922953 158922953 1 + C T SKCM 158922933 + 158922913 158922953 41 AGTGCCACCCAGTACCCAGTCTCCAACCGGTACTCCAATCC AGTGCCACCCAGTACCCAGTCTCCAACCGGTACTCCAATCT < 41bp 1 0.577119705081909 1 0.911376118659973 experiment 0.845760589836181 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control TULP4 ENSG00000130338 CDS Human protein_coding chr6:158922933 chr6:158922953 nonsynonymous SNV 0.948 4 41 hm5C_associated_SNPs_34198 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:158922931-158922955
64251 chrX 153628248 153628248 1 + A G SKCM 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCGT < 41bp 1 0.331668282701653 1 0.0462158024311066 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628248 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_34203 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr19 49100066 49100066 1 + C T SKCM 49100079 + 49100059 49100099 41 CTGGGCTCCGTCGTGGCACACTCAACCTTCAGCGCCATGAA CTGGGCTTCGTCGTGGCACACTCAACCTTCAGCGCCATGAA < 41bp 1 0.794413406340166 1 0.640141069889069 experiment 0.411173187319667 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100079 chr19:49100066 nonsynonymous SNV 0.040 4 8 hm5C_associated_SNPs_34204 0 0 1 SF3B1 POSTAR2 ENCODE chr19:49100033-49100070
64251 chr18 29171878 29171878 1 + C T SKCM 29171892 + 29171872 29171912 41 TCTCATCGTCTGCTCCTCCTCTGCCTTGCTGGACTGGTATT TCTCATTGTCTGCTCCTCCTCTGCCTTGCTGGACTGGTATT < 41bp 1 0.463797753876877 1 0.130227267742157 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTR ENSG00000118271 CDS Human protein_coding chr18:29171892 chr18:29171878 nonsynonymous SNV 0.364 3 7 hm5C_associated_SNPs_34205 0 0 4 DDX3X POSTAR2 ENCODE chr18:29171852-29171907
64251 chr17 47119688 47119688 1 + A T SKCM 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCGAGAATTGTTGCAGGGCCGAGCAGGATATAATGAAGA < 41bp 1 0.106343619015262 1 0.21869096159935 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119688 nonsynonymous SNV 0.999 2 31 hm5C_associated_SNPs_34206 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47119657-47119725
64251 chr17 47119688 47119688 1 + A T SKCM 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ATCGAGAATTGTTGCAGGGCCGAGCAGGATATAATGAAGAA < 41bp 1 0.317605005140102 1 0.250852823257446 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119688 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_34207 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47119657-47119725
64251 chr19 13051368 13051368 1 + C T SKCM 13051369 + 13051349 13051389 41 CCCCAGGACTGGGACAAGCCCGAGCATATCCCTGACCCTGA CCCCAGGACTGGGACAAGCTCGAGCATATCCCTGACCCTGA < 41bp 1 0.721017076750943 1 0.813673317432404 experiment 0.557965846498114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051369 chr19:13051368 nonsynonymous SNV 0.861 2 20 hm5C_associated_SNPs_34210 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:13051360-13051380
64251 chr19 13051368 13051368 1 + C T SKCM 13051384 + 13051364 13051404 41 AAGCCCGAGCATATCCCTGACCCTGATGCTAAGAAGCCCGA AAGCTCGAGCATATCCCTGACCCTGATGCTAAGAAGCCCGA < 41bp 1 0.140741952586478 1 0.0468275845050812 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051384 chr19:13051368 nonsynonymous SNV 0.861 2 5 hm5C_associated_SNPs_34211 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:13051360-13051380
64251 chr19 18285951 18285951 1 + C T SKCM 18285943 + 18285923 18285963 41 AAGCACTGTGCGGTGGCTGCCGAGCCTTCCTGATCCGGGAG AAGCACTGTGCGGTGGCTGCCGAGCCTTTCTGATCCGGGAG < 41bp 1 0.506377357637593 1 0.888911962509155 experiment 0.987245284724813 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI30 ENSG00000216490 CDS Human protein_coding chr19:18285943 chr19:18285951 synonymous SNV . 0 29 hm5C_associated_SNPs_34213 0 0 7 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr19:18285932-18285954
64251 chr22 23615312 23615312 1 + G C SKCM 23615317 + 23615297 23615337 41 ACGAGGAGCACGCTGGTCCTCCATGTAAGTCACAGCGCCCC ACGAGGAGCACGCTGCTCCTCCATGTAAGTCACAGCGCCCC < 41bp 1 0.161550380908417 1 0.0787937641143799 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23615317 chr22:23615312 nonsynonymous SNV 0.866 3 16 hm5C_associated_SNPs_34214 0 0 7 DDX24 POSTAR2 ENCODE chr22:23615281-23615321
64251 chr20 44522638 44522638 1 + C T SKCM 44522643 + 44522623 44522663 41 ACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA ACAGGCTTTGGTCTTTTCTCCAGACCCACTGCTGCTCTCAA < 41bp 1 0.156863241222108 1 0.933194637298584 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522643 chr20:44522638 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_34215 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr3 33183917 33183917 1 + T C SKCM 33183934 + 33183914 33183954 41 CTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA CTCCTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA < 41bp 1 0.42263024449498 1 0.222663760185242 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTAP ENSG00000170275 CDS Human protein_coding chr3:33183934 chr3:33183917 synonymous SNV . 0 4 hm5C_associated_SNPs_34216 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:33183900-33183920
64251 chr2 167108299 167108299 1 - C T SKCM 167108313 - 167108293 167108333 41 AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATGAGCCAG AGAAGAAGCAGAGGCTGAACCTATGAATTCCGATAAGCCAG < 41bp 1 0.378058099809279 1 0.515492916107178 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SCN9A ENSG00000169432 CDS Human protein_coding chr2:167108313 chr2:167108299 nonsynonymous SNV 0.984 2 35 hm5C_associated_SNPs_34217 0 0 1 EIF3H POSTAR2 ENCODE chr2:167108274-167108304
64251 chr17 64685121 64685121 1 + G A SKCM 64685113 + 64685093 64685133 41 AGGTGAGTACTACAACGTACCCATTCCGGAAGGGGACGAGG AGGTGAGTACTACAACGTACCCATTCCGAAAGGGGACGAGG < 41bp 1 0.0192427115009574 1 0.0210367143154144 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64685113 chr17:64685121 nonsynonymous SNV 0.852 1 29 hm5C_associated_SNPs_34220 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:64685120-64685140
64251 chr20 44522642 44522642 1 + C T SKCM 44522640 + 44522620 44522660 41 CCTACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCT CCTACAGGCTTTGGTCTTCTCTTCAGACCCACTGCTGCTCT < 41bp 1 0.742657586300157 1 0.848130941390991 experiment 0.514684827399686 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522640 chr20:44522642 synonymous SNV . 0 23 hm5C_associated_SNPs_34221 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr20 44522642 44522642 1 + C T SKCM 44522643 + 44522623 44522663 41 ACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA ACAGGCTTTGGTCTTCTCTTCAGACCCACTGCTGCTCTCAA < 41bp 1 0.184396073043789 1 0.918181657791138 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522643 chr20:44522642 synonymous SNV . 0 20 hm5C_associated_SNPs_34222 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr16 29848075 29848075 1 + C T SKCM 29848064 + 29848044 29848084 41 CAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC CAGCCCTGCACCTCCGGGCTCGGCGGAACTTTCGGGACTTC < 41bp 1 0.728818698930901 1 0.626737594604492 experiment 0.542362602138199 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29848064 chr16:29848075 nonsynonymous SNV . 0 32 hm5C_associated_SNPs_34226 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chrX 107814676 107814676 1 + C T SKCM 107814691 + 107814671 107814711 41 GTTTTCCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATT GTTTTTCTGGTTTACAGGGTCCTCCAGTAAGTTATAAAATT < 41bp 1 0.00975368015236911 1 0.0659113526344299 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107814691 chrX:107814676 nonsynonymous SNV 0.996 2 6 hm5C_associated_SNPs_34228 0 0 6 BUD13 POSTAR2 ENCODE chrX:107814650-107814698
64251 chr11 65268186 65268186 1 + C T SKCM 65268168 + 65268148 65268188 41 ACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTA ACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCTTA < 41bp 1 0.635399584466453 1 0.314304888248444 experiment 0.729200831067093 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268168 chr11:65268186 . . 0 39 hm5C_associated_SNPs_34229 0 0 89 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268186 65268186 1 + C T SKCM 65268175 + 65268155 65268195 41 GGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGC GGAGGCGAGCAGGCGTTGTGCGTAGAGGATCTTAGACCAGC < 41bp 1 0.593062138543766 1 0.360564231872559 experiment 0.813875722912467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268175 chr11:65268186 . . 0 32 hm5C_associated_SNPs_34230 0 0 89 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268186 65268186 1 + C T SKCM 65268185 + 65268165 65268205 41 AGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGT AGGCGTTGTGCGTAGAGGATCTTAGACCAGCATGCCAGTGT < 41bp 1 0.419326216715088 1 0.103053241968155 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268185 chr11:65268186 . . 0 22 hm5C_associated_SNPs_34231 0 0 89 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268186 65268186 1 + C T SKCM 65268191 + 65268171 65268211 41 TGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAG TGTGCGTAGAGGATCTTAGACCAGCATGCCAGTGTGCCAAG < 41bp 1 0.535885660391869 1 0.0990165770053864 experiment 0.928228679216262 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268191 chr11:65268186 . . 0 16 hm5C_associated_SNPs_34232 0 0 89 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr11 65268186 65268186 1 + C T SKCM 65268195 + 65268175 65268215 41 CGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCA CGTAGAGGATCTTAGACCAGCATGCCAGTGTGCCAAGGCCA < 41bp 1 0.341304041368065 1 0.0581484436988831 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268195 chr11:65268186 . . 0 12 hm5C_associated_SNPs_34233 0 0 89 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268160-65268240
64251 chr1 44056841 44056841 1 + C T SKCM 44056839 + 44056819 44056859 41 ATTGGCGGCCTCAGCCCTTTCTCGGAATATGCCTTCCGCGT ATTGGCGGCCTCAGCCCTTTCTTGGAATATGCCTTCCGCGT < 41bp 1 0.588756562085396 1 0.522888660430908 experiment 0.822486875829209 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44056839 chr1:44056841 nonsynonymous SNV 0.946 3 23 hm5C_associated_SNPs_34234 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:44056817-44056842
64251 chr18 56402458 56402458 1 + A T SKCM 56402451 + 56402431 56402471 41 AAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTG AAGGTGTCAAGGAGCAGAAGCTTTTGATATCCAGCATTCTG < 41bp 1 0.037439715433586 1 0.0279566943645477 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56402451 chr18:56402458 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_34235 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:56402456-56402477
64251 chr4 79420928 79420928 1 + C T SKCM 79420912 + 79420892 79420932 41 GAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGA GAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCTCAGA < 41bp 1 0.179110323057477 1 0.59613174200058 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79420912 chr4:79420928 nonsynonymous SNV 0.082 3 37 hm5C_associated_SNPs_34236 0 0 1 EIF3H POSTAR2 ENCODE chr4:79420887-79420932
64251 chr10 105185072 105185072 1 + C T SKCM 105185079 + 105185059 105185099 41 ATAAAGAAGCACACCCTCTCCATCGGGGACATGGTCACAGG ATAAAGAAGCACATCCTCTCCATCGGGGACATGGTCACAGG < 41bp 1 0.319230263943626 1 0.350723594427109 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105185079 chr10:105185072 nonsynonymous SNV 0.021 0 14 hm5C_associated_SNPs_34237 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:105185040-105185160
64251 chr5 137754723 137754723 1 + C T SKCM 137754741 + 137754721 137754761 41 CTCCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGAC CTTCAGAGCCGGACCATGTTCCCAAAGCCGACAGCACTGAC < 41bp 1 0.505899716921091 1 0.207416743040085 experiment 0.988200566157818 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137754741 chr5:137754723 nonsynonymous SNV 0.829 0 3 hm5C_associated_SNPs_34238 0 0 2 FMR1 POSTAR2 ENCODE chr5:137754693-137754737
64251 chr6 31918679 31918679 1 + C T SKCM 31918695 + 31918675 31918715 41 AACTCGAGCTTTGAGGCTTCCTCCAACTACCACTTGCCAGC AACTTGAGCTTTGAGGCTTCCTCCAACTACCACTTGCCAGC < 41bp 1 0.738878898256215 1 0.881104648113251 experiment 0.522242203487569 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31918695 chr6:31918679 stopgain 0.996 0 5 hm5C_associated_SNPs_34239 0 0 2 RPS3 POSTAR2 ENCODE chr6:31918648-31918690
64251 chr17 7479910 7479910 1 + C T SKCM 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACTAA < 41bp 1 0.644706955283011 1 0.196517735719681 experiment 0.710586089433977 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479910 stopgain . 0 39 hm5C_associated_SNPs_34241 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479910 7479910 1 + C T SKCM 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACTAACGT < 41bp 1 0.496356270885067 1 0.368875175714493 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479910 stopgain . 0 36 hm5C_associated_SNPs_34242 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479910 7479910 1 + C T SKCM 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCACGCCTGTATCGGGGGCACTAACGTGCGTGCTGAGGT < 41bp 1 0.291883821386632 1 0.151784211397171 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479910 stopgain . 0 24 hm5C_associated_SNPs_34243 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479910 7479910 1 + C T SKCM 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATCGGGGGCACTAACGTGCGTGCTGAGGTGC < 41bp 1 0.29352843519207 1 0.198339641094208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479910 stopgain . 0 22 hm5C_associated_SNPs_34244 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479909 7479909 1 + C T SKCM 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCATCAA < 41bp 1 0.642938897808623 1 0.0806262791156769 experiment 0.714122204382754 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479909 nonsynonymous SNV 0.988 2 38 hm5C_associated_SNPs_34245 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479909 7479909 1 + C T SKCM 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCATCAACGT < 41bp 1 0.53956848167265 1 0.284408986568451 experiment 0.920863036654701 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479909 nonsynonymous SNV 0.988 2 35 hm5C_associated_SNPs_34246 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479909 7479909 1 + C T SKCM 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCACGCCTGTATCGGGGGCATCAACGTGCGTGCTGAGGT < 41bp 1 0.244258546663927 1 0.0453645884990692 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479909 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_34247 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479909 7479909 1 + C T SKCM 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATCGGGGGCATCAACGTGCGTGCTGAGGTGCA < 41bp 1 0.511412458614704 1 0.519191443920135 experiment 0.977175082770593 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479909 nonsynonymous SNV 0.988 2 20 hm5C_associated_SNPs_34248 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr4 38937390 38937390 1 + G A SKCM 38937401 + 38937381 38937421 41 GAAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTAC GAAGTTTACAAATTCTTTAACCACTGTTGGGGTAAGATTAC < 41bp 1 0.0810049143052382 1 0.0774803459644318 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937401 chr4:38937390 synonymous SNV . 0 10 hm5C_associated_SNPs_34249 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr4 38937390 38937390 1 + G A SKCM 38937402 + 38937382 38937422 41 AAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTACA AAGTTTACAAATTCTTTAACCACTGTTGGGGTAAGATTACA < 41bp 1 0.190383930177714 1 0.119839519262314 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937402 chr4:38937390 synonymous SNV . 0 9 hm5C_associated_SNPs_34250 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr2 211525356 211525356 1 + C T SKCM 211525357 + 211525337 211525377 41 ATTGGACCATCCCATAATTCCTGCTGACTATGTTGCAATTA ATTGGACCATCCCATAATTTCTGCTGACTATGTTGCAATTA < 41bp 1 0.368748172840903 1 0.148029386997223 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211525357 chr2:211525356 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_34254 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:211525341-211525368
64251 chr17 71232451 71232451 1 + C T SKCM 71232445 + 71232425 71232465 41 TGAGACTCCAGAAAAGAACACAGAATCCCTCATTTTAAGCC TGAGACTCCAGAAAAGAACACAGAATTCCTCATTTTAAGCC < 41bp 1 0.566685514667194 1 0.180070787668228 experiment 0.866628970665612 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232445 chr17:71232451 nonsynonymous SNV 0.081 4 27 hm5C_associated_SNPs_34257 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232414-71232454
64251 chr1 43296154 43296154 1 + C T SKCM 43296173 + 43296153 43296193 41 TCTGGCTGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGT TTTGGCTGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGT < 41bp 1 0.285580013961867 1 0.0727404952049255 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ERMAP ENSG00000164010 CDS Human protein_coding chr1:43296173 chr1:43296154 nonsynonymous SNV 0.004 2 2 hm5C_associated_SNPs_34258 0 0 2 BUD13 POSTAR2 ENCODE chr1:43296154-43296258
64251 chr14 105936402 105936402 1 + G A SKCM 105936408 + 105936388 105936428 41 ACCTCTGCCCACAGGAAGATCCGCAAGCTGCTCTCATCCTC ACCTCTGCCCACAGAAAGATCCGCAAGCTGCTCTCATCCTC < 41bp 1 0.655791956993421 1 0.204655975103378 experiment 0.688416086013157 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936408 chr14:105936402 synonymous SNV . 0 15 hm5C_associated_SNPs_34259 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105936399-105936435
64251 chr11 65271690 65271690 1 + G A SKCM 65271692 + 65271672 65271712 41 GTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGC GTTCTAGTGAGTGTATGAAACCTTGCAGTGAGTTTATCAGC < 41bp 1 0.149277378390651 1 0.133104503154755 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271692 chr11:65271690 . . 0 19 hm5C_associated_SNPs_34260 0 0 91 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271400-65271740
64251 chr1 10195157 10195157 1 + C T SKCM 10195142 + 10195122 10195162 41 TCAAGTTAGAAACAGTTGATCCCACGTATATTTTTCACCCA TCAAGTTAGAAACAGTTGATCCCACGTATATTTTTTACCCA < 41bp 1 0.0848947970032103 1 0.239847153425217 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10195142 chr1:10195157 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_34261 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:10195142-10195184
64251 chr19 10200677 10200677 1 + C T SKCM 10200684 + 10200664 10200704 41 CAGTTTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCG CAGTTTGCCTGCTTCTCCTGCGACCACGTCTGGTGGCGCCG < 41bp 1 0.226316636366508 1 0.439065128564835 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200684 chr19:10200677 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_34262 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr19 10200677 10200677 1 + C T SKCM 10200688 + 10200668 10200708 41 TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGCGTG TTGCCTGCTTCTCCTGCGACCACGTCTGGTGGCGCCGCGTG < 41bp 1 0.611695081404992 1 0.39609158039093 experiment 0.776609837190016 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200688 chr19:10200677 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_34263 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr12 57911162 57911162 1 - A C SKCM 57911153 - 57911133 57911173 41 TGCCTTTCTCCTTCGGGACACTGTCCAGCTGGGAGCTGGAA TGCCTTTCTCCGTCGGGACACTGTCCAGCTGGGAGCTGGAA < 41bp 1 0.277968592048847 1 0.0977661311626434 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911153 chr12:57911162 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_34264 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:57911145-57911171
64251 chr19 50880885 50880885 1 + C T SKCM 50880899 + 50880879 50880919 41 CGAGTTCCCTGGATACCCCCCTGCCTGGTGAGTGACTCTCT CGAGTTTCCTGGATACCCCCCTGCCTGGTGAGTGACTCTCT < 41bp 1 0.167020938273548 1 0.490807205438614 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50880899 chr19:50880885 nonsynonymous SNV 0.397 3 7 hm5C_associated_SNPs_34265 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50880850-50880888
64251 chr5 138651821 138651821 1 + C T SKCM 138651827 + 138651807 138651847 41 AGGAATTCTGGGACCTCCACCTCCCTCATTTCATCTTGGGG AGGAATTCTGGGACTTCCACCTCCCTCATTTCATCTTGGGG < 41bp 1 0.284535003150572 1 0.570030152797699 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MATR3 ENSG00000015479 CDS Human protein_coding chr5:138651827 chr5:138651821 nonsynonymous SNV 0.992 3 15 hm5C_associated_SNPs_34266 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:138651758-138651870
64251 chr16 27374340 27374340 1 + G A SKCM 27374351 + 27374331 27374371 41 TCCTCCGCCGAAATGTCCTCCAGCATGGGGCAGCTGCAGCC TCCTCCGCCAAAATGTCCTCCAGCATGGGGCAGCTGCAGCC < 41bp 1 0.655593898123759 1 0.437134981155396 experiment 0.688812203752482 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IL4R ENSG00000077238 CDS Human protein_coding chr16:27374351 chr16:27374340 nonsynonymous SNV 0.148 0 10 hm5C_associated_SNPs_34267 0 0 1 EIF3H POSTAR2 ENCODE chr16:27374340-27374390
64251 chr3 184040702 184040702 1 + C T SKCM 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CTAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA < 41bp 1 0.649307335195041 1 0.389752596616745 experiment 0.701385329609918 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040702 nonsynonymous SNV 0.984 3 2 hm5C_associated_SNPs_34268 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chr7 2472430 2472430 1 + C T SKCM 2472416 + 2472396 2472436 41 CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCCGGGCCG CTAGGCCGCACACGGGGCCGCCGCTGCCCACGCCTGGGCCG < 41bp 1 0.50647857732478 1 0.144269704818726 experiment 0.98704284535044 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472416 chr7:2472430 synonymous SNV . 0 35 hm5C_associated_SNPs_34282 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr7 2472430 2472430 1 + C T SKCM 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCCGCTGCCCACGCCTGGGCCGGACAGGGACAGGGAGCTCA < 41bp 1 0.457119711616803 1 0.186184018850327 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472430 synonymous SNV . 0 16 hm5C_associated_SNPs_34283 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr19 41807533 41807533 1 + C G SKCM 41807534 + 41807514 41807554 41 TTTGTCCCACTGACGAGGACCTAAAAGACCGAACAATAAAG TTTGTCCCACTGACGAGGAGCTAAAAGACCGAACAATAAAG < 41bp 1 0.300706778370096 1 0.313323795795441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41807534 chr19:41807533 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_34284 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41807444-41807602
64251 chr12 14927470 14927470 1 + G A SKCM 14927458 + 14927438 14927478 41 CGAGCAAAGGCCAAATCCCGCTCCTCCCGCGCGGGCCTGCA CGAGCAAAGGCCAAATCCCGCTCCTCCCGCGCAGGCCTGCA < 41bp 1 0.592751938388975 1 0.120920985937119 experiment 0.814496123222049 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control H2AFJ ENSG00000246705 CDS Human protein_coding chr12:14927458 chr12:14927470 synonymous SNV . 0 33 hm5C_associated_SNPs_34285 0 0 1 DDX3X POSTAR2 ENCODE chr12:14927455-14927495
64251 chr5 176710809 176710809 1 + C T SKCM 176710791 + 176710771 176710811 41 TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTCCC TTCTTTTGGAATTCTAGGACCGAATCATTGATGCTGGTTCC < 41bp 1 0.0688941347459917 1 0.281943678855896 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176710791 chr5:176710809 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_34287 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176710792-176710861
64251 chr22 39918064 39918064 1 + C A SKCM 39918059 + 39918039 39918079 41 TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCAGATCAT TTCCCCTTTCCCCAGGGGTCCTGTCATCCACTCCAGATCAT < 41bp 1 0.209645432886396 1 0.0178658366203308 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918059 chr22:39918064 synonymous SNV . 0 26 hm5C_associated_SNPs_34289 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:39917998-39918083
64251 chr12 57599031 57599031 1 + C T SKCM 57599013 + 57598993 57599033 41 GACTGCGGGGACGGCTCTGACGAGGAGGACTGCAGCATCGG GACTGCGGGGACGGCTCTGACGAGGAGGACTGCAGCATTGG < 41bp 1 0.478077722697799 1 0.935868740081787 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57599013 chr12:57599031 synonymous SNV . 0 39 hm5C_associated_SNPs_34291 0 0 1 NOL12 POSTAR2 ENCODE chr12:57599007-57599032
64251 chr11 73638353 73638353 1 + C T SKCM 73638335 + 73638315 73638355 41 ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCTA ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATTTA < 41bp 1 0.587250703190264 1 0.818471074104309 experiment 0.825498593619472 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73638335 chr11:73638353 synonymous SNV . 0 39 hm5C_associated_SNPs_34292 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73638338-73638376
64251 chr9 131669672 131669672 1 + C T SKCM 131669678 + 131669658 131669698 41 GGGCAGCCCCTGGCCCGGAGCCCACCTACCCCAACTCCACC GGGCAGCCCCTGGCTCGGAGCCCACCTACCCCAACTCCACC < 41bp 1 0.0927794358325501 1 0.160409033298492 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669678 chr9:131669672 nonsynonymous SNV 0.552 0 15 hm5C_associated_SNPs_34295 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:131669660-131669680
64251 chr3 51737762 51737762 1 + G A SKCM 51737759 + 51737739 51737779 41 GGAGCTGACACAATGAGTGACACGAGTTCTGTAAGCTTGGA GGAGCTGACACAATGAGTGACACAAGTTCTGTAAGCTTGGA < 41bp 1 0.558388619915316 1 0.227026134729385 experiment 0.883222760169368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TEX264 ENSG00000164081 CDS Human protein_coding chr3:51737759 chr3:51737762 synonymous SNV . 0 24 hm5C_associated_SNPs_34296 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:51737752-51737798
64251 chr3 51737762 51737762 1 + G A SKCM 51737767 + 51737747 51737787 41 CACAATGAGTGACACGAGTTCTGTAAGCTTGGAAGTGAGCC CACAATGAGTGACACAAGTTCTGTAAGCTTGGAAGTGAGCC < 41bp 1 0.500900562271461 1 0.281080305576324 experiment 0.998198875457077 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TEX264 ENSG00000164081 CDS Human protein_coding chr3:51737767 chr3:51737762 synonymous SNV . 0 16 hm5C_associated_SNPs_34297 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:51737752-51737798
64251 chr7 150764051 150764051 1 + C T SKCM 150764061 + 150764041 150764081 41 ACCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGG ACCTCGGGCCTGACCCCGGGCCCCCCACAAGCCCCATGAGG < 41bp 1 0.0432999263452664 1 0.102660834789276 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764061 chr7:150764051 stopgain 0.799 0 11 hm5C_associated_SNPs_34298 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr7 150764051 150764051 1 + C T SKCM 150764062 + 150764042 150764082 41 CCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGT CCTCGGGCCTGACCCCGGGCCCCCCACAAGCCCCATGAGGT < 41bp 1 0.0379588068154525 1 0.0770180523395538 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764062 chr7:150764051 stopgain 0.799 0 10 hm5C_associated_SNPs_34299 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr7 150764051 150764051 1 + C T SKCM 150764063 + 150764043 150764083 41 CTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCATGAGGTA CTCGGGCCTGACCCCGGGCCCCCCACAAGCCCCATGAGGTA < 41bp 1 0.298652111452594 1 0.139803797006607 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764063 chr7:150764051 stopgain 0.799 0 9 hm5C_associated_SNPs_34300 0 0 4 DDX24 POSTAR2 ENCODE chr7:150764025-150764057
64251 chr1 57161680 57161680 1 + C T SKCM 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTTCCATTTGATGATGAGCATGTACCTACGTTATTTAAG < 41bp 1 0.167084907612328 1 0.0423670709133148 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161680 synonymous SNV . 0 5 hm5C_associated_SNPs_34301 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:57161668-57161706
64251 chr6 160212136 160212136 1 + C T SKCM 160212137 + 160212117 160212157 41 GGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACA GGGCTGGCGGACGGTGTTTTCCTCCCGTGAGTTCTGGCACA < 41bp 1 0.289132856560905 1 0.273190885782242 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212137 chr6:160212136 nonsynonymous SNV 0.293 4 20 hm5C_associated_SNPs_34302 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:160212120-160212140
64251 chr4 6925405 6925405 1 + C T SKCM 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATCTCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC < 41bp 1 0.0253744721784663 1 0.0465551316738129 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925405 nonsynonymous SNV 0.036 1 11 hm5C_associated_SNPs_34303 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:6925404-6925405
64251 chr11 65267942 65267942 1 + T A SKCM 65267924 + 65267904 65267944 41 AGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGA AGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGAAGA < 41bp 1 0.63397306810958 1 0.838289260864258 experiment 0.732053863780839 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267924 chr11:65267942 . . 0 39 hm5C_associated_SNPs_34304 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267942 65267942 1 + T A SKCM 65267931 + 65267911 65267951 41 AGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGG AGCAGACAGGATTCCAGGAACCAGTGTTTGAAGAAGCTAGG < 41bp 1 0.347179581609367 1 0.258571118116379 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267931 chr11:65267942 . . 0 32 hm5C_associated_SNPs_34305 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267942 65267942 1 + T A SKCM 65267932 + 65267912 65267952 41 GCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGA GCAGACAGGATTCCAGGAACCAGTGTTTGAAGAAGCTAGGA < 41bp 1 0.753158182396957 1 0.510633230209351 experiment 0.493683635206085 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267932 chr11:65267942 . . 0 31 hm5C_associated_SNPs_34306 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267942 65267942 1 + T A SKCM 65267961 + 65267941 65267981 41 ATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTC AAGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTC < 41bp 1 0.588478610143954 1 0.430638879537582 experiment 0.823042779712092 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267961 chr11:65267942 . . 0 2 hm5C_associated_SNPs_34307 0 0 88 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr4 6925404 6925404 1 + C T SKCM 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC CGACCTCATTCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC < 41bp 1 0.025777800457521 1 0.0218973159790039 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925404 synonymous SNV . 0 10 hm5C_associated_SNPs_34308 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:6925404-6925405
64251 chr8 124787428 124787428 1 + C T SKCM 124787439 + 124787419 124787459 41 TATGAGGAACTGCTAAAGTACAGCCGAGATCATCTCATGCT TATGAGGAATTGCTAAAGTACAGCCGAGATCATCTCATGCT < 41bp 1 0.404637632316744 1 0.171858578920364 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124787439 chr8:124787428 synonymous SNV . 0 10 hm5C_associated_SNPs_34309 0 0 1 TBRG4 POSTAR2 ENCODE chr8:124787415-124787440
64251 chr1 154988852 154988852 1 + G A SKCM 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AAGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA < 41bp 1 0.224359487995705 1 0.239701867103577 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988852 synonymous SNV . 0 2 hm5C_associated_SNPs_34310 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:154988820-154988864
64251 chr21 45876556 45876556 1 + C T SKCM 45876551 + 45876531 45876571 41 GGCACCGTGCGCCCACCTCGCCCCTCGCTCCTGCTGGTCTC GGCACCGTGCGCCCACCTCGCCCCTTGCTCCTGCTGGTCTC < 41bp 1 0.427798193659141 1 0.122720569372177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876551 chr21:45876556 nonsynonymous SNV 0.002 0 26 hm5C_associated_SNPs_34311 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr21:45876522-45876563
64251 chr19 41077994 41077994 1 + G A SKCM 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GGACTCCAAGGGCCCAGCATCCGGGAGCACACACGGTGGGG < 41bp 1 0.386908172170498 1 0.856758534908295 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41077994 synonymous SNV . 0 16 hm5C_associated_SNPs_34312 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr15 29346605 29346605 1 + C T SKCM 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTTCGTCC < 41bp 1 0.714324224946733 1 0.853976726531982 experiment 0.571351550106534 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346605 nonsynonymous SNV 0.080 1 36 hm5C_associated_SNPs_34313 0 0 2 FXR2 POSTAR2 ENCODE chr15:29346570-29346611
64251 chr3 113784185 113784185 1 + C T SKCM 113784180 + 113784160 113784200 41 ACCTGGGCAAAACAGGGGACCACACCATGGATATTCCAGGC ACCTGGGCAAAACAGGGGACCACACTATGGATATTCCAGGC < 41bp 1 0.311733793085142 1 0.124648749828339 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113784180 chr3:113784185 synonymous SNV . 0 26 hm5C_associated_SNPs_34314 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:113784174-113784191
64251 chr16 2577843 2577843 1 + C T SKCM 2577853 + 2577833 2577873 41 CACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT CACCTCCGCTTCTTCGAGGCCGATGCCTTCCAGGACTTGCT < 41bp 1 0.119297170180956 1 0.134127885103226 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577853 chr16:2577843 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_34316 0 0 1 AARS POSTAR2 ENCODE chr16:2577819-2577864
64251 chr8 145535489 145535489 1 + C T SKCM 145535495 + 145535475 145535515 41 GGCTCCTGCCAGCCCCATGGCCTCCCCCGGCGGGAGCATAG GGCTCCTGCCAGCCTCATGGCCTCCCCCGGCGGGAGCATAG < 41bp 1 0.0360845268805103 1 0.0591858625411987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535495 chr8:145535489 nonsynonymous SNV 0.069 2 15 hm5C_associated_SNPs_34317 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:145535489-145535490
64251 chr21 40191432 40191432 1 + C T SKCM 40191451 + 40191431 40191471 41 TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT TTCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT < 41bp 1 0.555939311448587 1 0.425661206245422 experiment 0.888121377102825 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETS2 ENSG00000157557 CDS Human protein_coding chr21:40191451 chr21:40191432 nonsynonymous SNV 0.061 0 2 hm5C_associated_SNPs_34318 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr21:40191420-40191440
64251 chr8 145537219 145537219 1 + G A SKCM 145537206 + 145537186 145537226 41 TCCCGGGCCAGGAATGAGCTCAGTGACCACTTGGATGCTAT TCCCGGGCCAGGAATGAGCTCAGTGACCACTTGAATGCTAT < 41bp 1 0.271973991010469 1 0.202505379915237 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537206 chr8:145537219 nonsynonymous SNV 0.994 3 34 hm5C_associated_SNPs_34319 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:145537197-145537260
64251 chr2 216197195 216197195 1 + C T SKCM 216197204 + 216197184 216197224 41 TTTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCC TTTAGGTATTCTAGCCGCTGCCTCTTTCAAACATGTCAGCC < 41bp 1 0.0397841550511465 1 0.094255119562149 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197204 chr2:216197195 nonsynonymous SNV 0.392 3 12 hm5C_associated_SNPs_34320 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:216197189-216197210
64251 chr2 216197195 216197195 1 + C T SKCM 216197205 + 216197185 216197225 41 TTAGGTATTCCAGCCGCTGCCTCTTTCAAACATGTCAGCCC TTAGGTATTCTAGCCGCTGCCTCTTTCAAACATGTCAGCCC < 41bp 1 0.377925078049815 1 0.312017202377319 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216197205 chr2:216197195 nonsynonymous SNV 0.392 3 11 hm5C_associated_SNPs_34321 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:216197189-216197210
64251 chr2 128184767 128184767 1 + G A SKCM 128184754 + 128184734 128184774 41 CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATGGATGAGT CCCCTCCTGGGTGCTGACAGCGGCCCACTGCATAGATGAGT < 41bp 1 0.307086184787992 1 0.421712130308151 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128184754 chr2:128184767 nonsynonymous SNV 0.914 1 34 hm5C_associated_SNPs_34324 0 0 2 PPIG POSTAR2 ENCODE chr2:128184763-128184781
64251 chr15 91456116 91456116 1 + C T SKCM 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACGTCTCCAAGGAGCCCCCCGTGCTGCG < 41bp 1 0.639139767524441 1 0.906576037406921 experiment 0.721720464951118 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456116 nonsynonymous SNV 0.912 1 19 hm5C_associated_SNPs_34325 0 0 3 DDX24 POSTAR2 ENCODE chr15:91456106-91456132
64251 chr15 22969243 22969243 1 + C T SKCM 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGCTGGACGGCTTCGACGCTATGTTCCG < 41bp 1 0.498454496936869 1 0.138929188251495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969243 synonymous SNV . 0 33 hm5C_associated_SNPs_34326 0 0 2 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr20 30738490 30738490 1 + C T SKCM 30738486 + 30738466 30738506 41 GCTCTCATGACCACAGCCTGCTTCCTCTTCATGTTCATGGG GCTCTCATGACCACAGCCTGCTTCTTCTTCATGTTCATGGG < 41bp 1 0.21862976171069 1 0.0218274593353271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30738486 chr20:30738490 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_34327 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:30738469-30738500
64251 chr8 126194372 126194372 1 + C T SKCM 126194360 + 126194340 126194380 41 CTTAGGTGAAAGAAGAACGTCCAGAAAAAATACCAGATTTA CTTAGGTGAAAGAAGAACGTCCAGAAAAAATATCAGATTTA < 41bp 1 0.326451499826273 1 0.212933897972107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126194360 chr8:126194372 nonsynonymous SNV 0.982 1 33 hm5C_associated_SNPs_34329 0 0 1 ZNF622 POSTAR2 ENCODE chr8:126194342-126194409
64251 chr7 100151739 100151739 1 + G A SKCM 100151721 + 100151701 100151741 41 TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGGAC TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGAAC < 41bp 1 0.0384890089586174 1 0.025151789188385 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100151721 chr7:100151739 synonymous SNV . 0 39 hm5C_associated_SNPs_34333 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100151718-100151749
64251 chr10 101515430 101515430 1 + C T SKCM 101515429 + 101515409 101515449 41 ACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGTGA ACTTTCTTGCTCAGAATATTCTCTAAAGGTAACAGATGTGA < 41bp 1 0.692140085717237 1 0.533868074417114 experiment 0.615719828565525 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUTC ENSG00000119929 CDS Human protein_coding chr10:101515429 chr10:101515430 synonymous SNV . 0 22 hm5C_associated_SNPs_34348 0 0 16 FUS POSTAR2 DRA001158,DRS012384 chr10:101515395-101515443
64251 chr17 79671701 79671701 1 + G A SKCM 79671721 + 79671701 79671741 41 GGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC AGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC < 41bp 1 0.0995046977920496 1 0.0591919422149658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671721 chr17:79671701 nonsynonymous SNV 0.015 0 1 hm5C_associated_SNPs_34349 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79671662-79671723
64251 chr16 2732752 2732752 1 + C T SKCM 2732745 + 2732725 2732765 41 GGCAGACCCTGTGCCGGGACCCGAAATCCTTCCTGTACCGC GGCAGACCCTGTGCCGGGACCCGAAATTCTTCCTGTACCGC < 41bp 1 0.492117046351303 1 0.29377555847168 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2732745 chr16:2732752 nonsynonymous SNV 0.985 4 28 hm5C_associated_SNPs_34351 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2732729-2732761
64251 chr2 178080267 178080267 1 + G A SKCM 178080269 + 178080249 178080289 41 ATTGGTTCTTTCTCTCAGGGCCATGATCCAAAGGAACCAGA ATTGGTTCTTTCTCTCAGAGCCATGATCCAAAGGAACCAGA < 41bp 1 0.0913469892892785 1 0.107487440109253 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178080269 chr2:178080267 nonsynonymous SNV 0.973 2 19 hm5C_associated_SNPs_34353 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:178080260-178080287
64251 chr19 18232718 18232718 1 + C T SKCM 18232699 + 18232679 18232719 41 TAGTCCTCGGAATTTCTCGGCTGCCTCTGCCCTAAATTTCC TAGTCCTCGGAATTTCTCGGCTGCCTCTGCCCTAAATTTTC < 41bp 1 0.078725691729842 1 0.109431982040405 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MAST3 ENSG00000099308 CDS Human protein_coding chr19:18232699 chr19:18232718 synonymous SNV . 0 40 hm5C_associated_SNPs_34357 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:18232698-18232725
64251 chr1 233482338 233482338 1 + C T SKCM 233482335 + 233482315 233482355 41 GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAA GGCCCCCGAAGTGATCAAGTCTTTCTTGTTTTCTAAGGGAA < 41bp 1 0.0645721360128823 1 0.0497785806655884 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482335 chr1:233482338 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_34359 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233482327-233482358
64251 chr17 27014432 27014432 1 + G A SKCM 27014434 + 27014414 27014454 41 TGCCCACCCTTACAGCCAGGCCTTGATCCAGTATGTTTGTG TGCCCACCCTTACAGCCAAGCCTTGATCCAGTATGTTTGTG < 41bp 1 0.0274437467017678 1 0.0362472534179688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014434 chr17:27014432 synonymous SNV . 0 19 hm5C_associated_SNPs_34360 0 0 2 FMR1 POSTAR2 ENCODE chr17:27014376-27014432
64251 chr11 44129493 44129493 1 + C T SKCM 44129509 + 44129489 44129529 41 CCATCCCAGAGCGGGGGGATCTCAGTTGCAGAATGCACACG CCATTCCAGAGCGGGGGGATCTCAGTTGCAGAATGCACACG < 41bp 1 0.687312867697492 1 0.533797860145569 experiment 0.625374264605015 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129509 chr11:44129493 synonymous SNV . 0 5 hm5C_associated_SNPs_34362 0 0 3 DDX3X POSTAR2 ENCODE chr11:44129404-44129498
64251 chr10 80968130 80968130 1 + C T SKCM 80968135 + 80968115 80968155 41 TCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGAC TCCACAATGCCGCCATGGAGCTGCTGGACTGGTGCGGAGAC < 41bp 1 0.344825086089632 1 0.113442689180374 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:80968135 chr10:80968130 nonsynonymous SNV 0.986 3 16 hm5C_associated_SNPs_34363 0 0 4 FASTKD2 POSTAR2 ENCODE chr10:80968108-80968178
64251 chr14 24779948 24779948 1 + C T SKCM 24779945 + 24779925 24779965 41 TCGCGGGCCACAGGCACAGCCTTCCTGCTGCTGGCGGCGCT TCGCGGGCCACAGGCACAGCCTTTCTGCTGCTGGCGGCGCT < 41bp 1 0.0867903170767121 1 0.136210024356842 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LTB4R2 ENSG00000213906;ENSG00000272658 CDS Human other chr14:24779945 chr14:24779948 synonymous SNV . 0 24 hm5C_associated_SNPs_34364 0 0 2 FAM120A POSTAR2 ENCODE chr14:24779947-24779972
64251 chr10 80968129 80968129 1 + A T SKCM 80968135 + 80968115 80968155 41 TCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGAC TCCACAATGCCGCCTCGGAGCTGCTGGACTGGTGCGGAGAC < 41bp 1 0.343595402954229 1 0.121447950601578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:80968135 chr10:80968129 nonsynonymous SNV 0.984 2 15 hm5C_associated_SNPs_34365 0 0 4 FASTKD2 POSTAR2 ENCODE chr10:80968108-80968178
64251 chr7 92987678 92987678 1 + C T SKCM 92987685 + 92987665 92987705 41 GTTTGCCTGGGATCCCATATCAATAAGAAAGCAAGACAAAA GTTTGCCTGGGATTCCATATCAATAAGAAAGCAAGACAAAA < 41bp 1 0.53164437209305 1 0.387299180030823 experiment 0.936711255813899 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS50 ENSG00000004766 CDS Human protein_coding chr7:92987685 chr7:92987678 nonsynonymous SNV 0.999 2 14 hm5C_associated_SNPs_34367 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:92987653-92987681
64251 chr9 135929310 135929310 1 + C T SKCM 135929296 + 135929276 135929316 41 ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCCGTTGT ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATTCGTTGT < 41bp 1 0.758901730097043 1 0.915213346481323 experiment 0.482196539805914 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929296 chr9:135929310 synonymous SNV . 0 35 hm5C_associated_SNPs_34368 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:135929288-135929320
64251 chr1 40704981 40704981 1 + C T SKCM 40704975 + 40704955 40704995 41 AATAAGTTTTAAAACCAGAGCTGAGGCCCTCCATATGTGTG AATAAGTTTTAAAACCAGAGCTGAGGTCCTCCATATGTGTG < 41bp 1 0.355125158709573 1 0.30416277050972 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RLF ENSG00000117000 CDS Human protein_coding chr1:40704975 chr1:40704981 nonsynonymous SNV 0.984 4 27 hm5C_associated_SNPs_34369 0 0 3 DDX6 POSTAR2 ENCODE chr1:40704976-40705009
64251 chr1 206902119 206902119 1 + C T SKCM 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCTGCACATCGTACGGATCGTGGATGTGTACGAGAATCT < 41bp 1 0.490777016380997 1 0.293826222419739 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902119 nonsynonymous SNV 0.860 1 5 hm5C_associated_SNPs_34371 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:206902097-206902132
64251 chr19 35741251 35741251 1 + A G SKCM 35741270 + 35741250 35741290 41 AACCCCTACCACGTGGTGATCCTCTTCCAGCCTGTGACCCT AGCCCCTACCACGTGGTGATCCTCTTCCAGCCTGTGACCCT < 41bp 1 0.107948381042895 1 0.0160469710826874 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741270 chr19:35741251 nonsynonymous SNV 0.583 0 2 hm5C_associated_SNPs_34373 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr19:35741231-35741251
64251 chr12 49666155 49666155 1 + C T SKCM 49666146 + 49666126 49666166 41 CGTCTCTCAGTTGATTATGGCAAGAAGTCCAAGCTGGAGTT CGTCTCTCAGTTGATTATGGCAAGAAGTCTAAGCTGGAGTT < 41bp 1 0.796112882120674 1 0.588164389133453 experiment 0.407774235758652 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666146 chr12:49666155 synonymous SNV . 0 30 hm5C_associated_SNPs_34374 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:49666138-49666201
64251 chr5 176083809 176083809 1 + C T SKCM 176083814 + 176083794 176083834 41 TTCATGGGCATCGCCCTCCTCCAGGTACCCTTGTGGCCCCA TTCATGGGCATCGCCTTCCTCCAGGTACCCTTGTGGCCCCA < 41bp 1 0.746775672481607 1 0.964404702186584 experiment 0.506448655036785 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176083814 chr5:176083809 nonsynonymous SNV 0.862 3 16 hm5C_associated_SNPs_34375 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176083755-176083817
64251 chr14 105175702 105175702 1 + C T SKCM 105175682 + 105175662 105175702 41 CCAAGTTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTC CCAAGTTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTT < 41bp 1 0.461138607712066 1 0.812896728515625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105175682 chr14:105175702 synonymous SNV . 0 41 hm5C_associated_SNPs_34376 0 0 2 GRWD1 POSTAR2 ENCODE chr14:105175692-105175714
64251 chr2 74154162 74154162 1 + C T SKCM 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTTCATCGAA < 41bp 1 0.660392244147249 1 0.245358109474182 experiment 0.679215511705502 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154162 nonsynonymous SNV 0.990 5 34 hm5C_associated_SNPs_34377 0 0 3 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr2 74154162 74154162 1 + C T SKCM 74154151 + 74154131 74154171 41 CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTTCATCGAAGG < 41bp 1 0.772466251604358 1 0.501109004020691 experiment 0.455067496791283 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154151 chr2:74154162 nonsynonymous SNV 0.990 5 32 hm5C_associated_SNPs_34378 0 0 3 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr2 74154162 74154162 1 + C T SKCM 74154152 + 74154132 74154172 41 TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC TGCACGCGGGGCGCGGGCCCCGAAGGCTCTTCATCGAAGGC < 41bp 1 0.726858837164629 1 0.726097583770752 experiment 0.546282325670742 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154152 chr2:74154162 nonsynonymous SNV 0.990 5 31 hm5C_associated_SNPs_34379 0 0 3 GEMIN5 POSTAR2 ENCODE chr2:74154028-74154166
64251 chr7 44747488 44747488 1 + C T SKCM 44747498 + 44747478 44747518 41 GTATGCCGGCCGGGACCCAGCGGCTGCTCCAGCCACCGGCA GTATGCCGGCTGGGACCCAGCGGCTGCTCCAGCCACCGGCA < 41bp 1 0.762989438699582 1 0.748678624629974 experiment 0.474021122600836 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44747498 chr7:44747488 nonsynonymous SNV 0.995 4 11 hm5C_associated_SNPs_34382 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:44747482-44747520
64251 chr15 73468837 73468837 1 + C T SKCM 73468840 + 73468820 73468860 41 GACTGGAAAACCAACTCCAACTGTGAAGTGGGTCAAAAATG GACTGGAAAACCAACTCTAACTGTGAAGTGGGTCAAAAATG < 41bp 1 0.195062845869618 1 0.203429788351059 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NEO1 ENSG00000067141 CDS Human protein_coding chr15:73468840 chr15:73468837 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_34384 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr15:73468778-73468896
64251 chr17 30692381 30692381 1 + C T SKCM 30692372 + 30692352 30692392 41 TGCCCCCACCTGTTCCACGTCCTGGAATTCCTCCAATGACT TGCCCCCACCTGTTCCACGTCCTGGAATTTCTCCAATGACT < 41bp 1 0.207459694020206 1 0.449171423912048 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30692372 chr17:30692381 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_34385 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30692346-30692392
64251 chr8 48641592 48641592 1 + T C SKCM 48641587 + 48641567 48641607 41 CCTGGACTGCCGCTCAAGACCGCAGTGCAGAGTGAAGGTCA CCTGGACTGCCGCTCAAGACCGCAGCGCAGAGTGAAGGTCA < 41bp 1 0.631252814907715 1 0.367758333683014 experiment 0.737494370184569 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPIDR ENSG00000164808 CDS Human protein_coding chr8:48641587 chr8:48641592 nonsynonymous SNV 0.007 3 26 hm5C_associated_SNPs_34386 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:48641562-48641598
64251 chr19 11134211 11134211 1 + G A SKCM 11134199 + 11134179 11134219 41 CTTGGGGGCTTCCAGGTGGACCTGAATGAGGAGGAAACCAT CTTGGGGGCTTCCAGGTGGACCTGAATGAGGAAGAAACCAT < 41bp 1 0.26773160590423 1 0.0832529664039612 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11134199 chr19:11134211 synonymous SNV . 0 33 hm5C_associated_SNPs_34387 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:11134191-11134216
64251 chr5 176522661 176522661 1 + C T SKCM 176522651 + 176522631 176522671 41 TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGG TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTTCCAGTCCTGG < 41bp 1 0.138379997837695 1 0.0603960454463959 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522651 chr5:176522661 synonymous SNV . 0 31 hm5C_associated_SNPs_34388 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr5 176522661 176522661 1 + C T SKCM 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCGCTCTCCTTTCCAGTCCTGGTCTCCT < 41bp 1 0.0654678893676415 1 0.188446551561356 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522661 synonymous SNV . 0 25 hm5C_associated_SNPs_34389 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr13 99042343 99042343 1 + C T SKCM 99042342 + 99042322 99042362 41 AAACCAAAGCCCAAGCCCGTCCTCTTTAGCCGGGGGTCATC AAACCAAAGCCCAAGCCCGTCTTCTTTAGCCGGGGGTCATC < 41bp 1 0.0960227136514423 1 0.0511383712291718 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99042342 chr13:99042343 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_34390 0 0 2 GRWD1 POSTAR2 ENCODE chr13:99042325-99042360
64251 chr2 187519428 187519428 1 + G A SKCM 187519432 + 187519412 187519452 41 AAGGAGTACTTCCCAGGAAACTTAGTAAGTGTTCTATGAAA AAGGAGTACTTCCCAGAAAACTTAGTAAGTGTTCTATGAAA < 41bp 1 0.169154039094117 1 0.0978939533233643 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGAV ENSG00000138448 CDS Human protein_coding chr2:187519432 chr2:187519428 synonymous SNV . 0 17 hm5C_associated_SNPs_34391 0 0 2 SF3B1 POSTAR2 ENCODE chr2:187519425-187519434
64251 chr5 176522662 176522662 1 + C T SKCM 176522651 + 176522631 176522671 41 TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGG TCCTCGGAGCAGTGAGGGGCCGCTCTCCTTCTCAGTCCTGG < 41bp 1 0.188647816611258 1 0.0846938490867615 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522651 chr5:176522662 nonsynonymous SNV 0.968 3 32 hm5C_associated_SNPs_34392 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr5 176522662 176522662 1 + C T SKCM 176522657 + 176522637 176522677 41 GAGCAGTGAGGGGCCGCTCTCCTTCCCAGTCCTGGTCTCCT GAGCAGTGAGGGGCCGCTCTCCTTCTCAGTCCTGGTCTCCT < 41bp 1 0.0608211114259204 1 0.0924152135848999 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176522657 chr5:176522662 nonsynonymous SNV 0.968 3 26 hm5C_associated_SNPs_34393 0 0 1 RPS3 POSTAR2 ENCODE chr5:176522624-176522694
64251 chr2 187519427 187519427 1 + G A SKCM 187519432 + 187519412 187519452 41 AAGGAGTACTTCCCAGGAAACTTAGTAAGTGTTCTATGAAA AAGGAGTACTTCCCAAGAAACTTAGTAAGTGTTCTATGAAA < 41bp 1 0.141414300201 1 0.0814126133918762 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGAV ENSG00000138448 CDS Human protein_coding chr2:187519432 chr2:187519427 nonsynonymous SNV 0.915 0 16 hm5C_associated_SNPs_34394 0 0 2 SF3B1 POSTAR2 ENCODE chr2:187519425-187519434
64251 chr17 48746561 48746561 1 + G A SKCM 48746567 + 48746547 48746587 41 CCTGTGGGCTGTGGGAAGTCCTCCCTGGTGTCTGCCCTGCT CCTGTGGGCTGTGGAAAGTCCTCCCTGGTGTCTGCCCTGCT < 41bp 1 0.358954233819815 1 0.512508034706116 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48746567 chr17:48746561 synonymous SNV . 0 15 hm5C_associated_SNPs_34395 0 0 4 EIF3H POSTAR2 ENCODE chr17:48746505-48746599
64251 chr19 10812143 10812143 1 + G A SKCM 10812147 + 10812127 10812167 41 GACAGTCAAGATGGCGGGAGCAGCTACCCAGGCTTCCCTGG GACAGTCAAGATGGCGAGAGCAGCTACCCAGGCTTCCCTGG < 41bp 1 0.609134584593583 1 0.621374070644379 experiment 0.781730830812834 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812147 chr19:10812143 nonsynonymous SNV 0.746 1 17 hm5C_associated_SNPs_34396 0 0 5 DDX3X POSTAR2 ENCODE chr19:10812138-10812187
64251 chr19 3434310 3434310 1 + C T SKCM 3434306 + 3434286 3434326 41 ACTGGAACAGGACCCAACTTCTCCCTGGGGGAGCTGCAGGG ACTGGAACAGGACCCAACTTCTCCTTGGGGGAGCTGCAGGG < 41bp 1 0.49235454436952 1 0.931918621063232 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFIC ENSG00000141905 CDS Human protein_coding chr19:3434306 chr19:3434310 synonymous SNV . 0 25 hm5C_associated_SNPs_34397 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3434296-3434324
64251 chr20 35219438 35219438 1 + C T SKCM 35219435 + 35219415 35219455 41 AAGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTC AAGGCCTCAGATGTGGCCCTCCCTCGTGGCAGCAGCCCCTC < 41bp 1 0.0883829166043297 1 0.041645735502243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219435 chr20:35219438 synonymous SNV . 0 24 hm5C_associated_SNPs_34398 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr20 35219438 35219438 1 + C T SKCM 35219436 + 35219416 35219456 41 AGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTCA AGGCCTCAGATGTGGCCCTCCCTCGTGGCAGCAGCCCCTCA < 41bp 1 0.150055209684471 1 0.542284488677979 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219436 chr20:35219438 synonymous SNV . 0 23 hm5C_associated_SNPs_34399 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr9 131198057 131198057 1 + C T SKCM 131198051 + 131198031 131198071 41 GCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACA GCTCAGTGACACGGAGACATCCTCTCTATGGGATGATGACA < 41bp 1 0.0583750848498378 1 0.0455323457717896 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198051 chr9:131198057 nonsynonymous SNV 0.895 0 27 hm5C_associated_SNPs_34400 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr9 131198057 131198057 1 + C T SKCM 131198054 + 131198034 131198074 41 CAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCG CAGTGACACGGAGACATCCTCTCTATGGGATGATGACAGCG < 41bp 1 0.47351918677283 1 0.844564437866211 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198054 chr9:131198057 nonsynonymous SNV 0.895 0 24 hm5C_associated_SNPs_34401 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr20 35219439 35219439 1 + C T SKCM 35219435 + 35219415 35219455 41 AAGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTC AAGGCCTCAGATGTGGCCCTCCCCTGTGGCAGCAGCCCCTC < 41bp 1 0.253124835539143 1 0.0508418083190918 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219435 chr20:35219439 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_34402 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr20 35219439 35219439 1 + C T SKCM 35219436 + 35219416 35219456 41 AGGCCTCAGATGTGGCCCTCCCCCGTGGCAGCAGCCCCTCA AGGCCTCAGATGTGGCCCTCCCCTGTGGCAGCAGCCCCTCA < 41bp 1 0.178963035038236 1 0.385650455951691 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF2 ENSG00000118707 CDS Human protein_coding chr20:35219436 chr20:35219439 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_34403 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:35219424-35219446
64251 chr10 129141980 129141980 1 + C T SKCM 129141960 + 129141940 129141980 41 GCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTC GCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTT < 41bp 1 0.00880210691065074 1 0.0495544373989105 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141960 chr10:129141980 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_34404 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141961 + 129141941 129141981 41 CTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCA CTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTTA < 41bp 1 0.234945016743018 1 0.285791456699371 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141961 chr10:129141980 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_34405 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141964 + 129141944 129141984 41 TCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGT TCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTTAAGT < 41bp 1 0.0784518884441964 1 0.308132171630859 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141964 chr10:129141980 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_34406 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141967 + 129141947 129141987 41 TTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCC TTACTCAAGAGTCCCTGCAACTGGAGAATTTTTTAAGTGCC < 41bp 1 0.476295085556642 1 0.753361701965332 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141967 chr10:129141980 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_34407 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141986 + 129141966 129142006 41 ACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTA ACTGGAGAATTTTTTAAGTGCCAAGAGAGCCAAAATCCTTA < 41bp 1 0.0423535650716009 1 0.285904824733734 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141986 chr10:129141980 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_34408 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141987 + 129141967 129142007 41 CTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAA CTGGAGAATTTTTTAAGTGCCAAGAGAGCCAAAATCCTTAA < 41bp 1 0.460339554776971 1 0.513733863830566 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141987 chr10:129141980 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_34409 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141980 129141980 1 + C T SKCM 129141995 + 129141975 129142015 41 TTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTAAG TTTTTTAAGTGCCAAGAGAGCCAAAATCCTTAACAAGTAAG < 41bp 1 0.103612328273728 1 0.336726903915405 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141995 chr10:129141980 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_34410 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr19 42364908 42364908 1 + C T SKCM 42364907 + 42364887 42364927 41 GTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTGAGTTTGGGG GTCAGAGCTCTGGCAGCCTTCTTCAAAAAGTGAGTTTGGGG < 41bp 1 0.449232997236744 1 0.846163511276245 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42364907 chr19:42364908 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_34411 0 0 30 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:42364843-42364909
64251 chr1 214820055 214820055 1 + G A SKCM 214820060 + 214820040 214820080 41 TGACCCAAAGTCTGAGAGGTCTGGAATTAGATGTTGTTACT TGACCCAAAGTCTGAAAGGTCTGGAATTAGATGTTGTTACT < 41bp 1 0.63914838040621 1 0.469335645437241 experiment 0.72170323918758 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214820060 chr1:214820055 nonsynonymous SNV 0.045 0 16 hm5C_associated_SNPs_34412 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:214820017-214820080
64251 chr19 4442295 4442295 1 + G A SKCM 4442277 + 4442257 4442297 41 ATGGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGA ATGGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAAGA < 41bp 1 0.641053969491485 1 0.222248464822769 experiment 0.717892061017031 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442277 chr19:4442295 synonymous SNV . 0 39 hm5C_associated_SNPs_34413 0 0 2 PPIG POSTAR2 ENCODE chr19:4442258-4442308
64251 chr19 4442295 4442295 1 + G A SKCM 4442279 + 4442259 4442299 41 GGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAGGAGG GGACGGCTTCCAGGCAGACACGGAGGAGGAGGAAGAAGAGG < 41bp 1 0.705307069534922 1 0.698934674263 experiment 0.589385860930156 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442279 chr19:4442295 synonymous SNV . 0 37 hm5C_associated_SNPs_34414 0 0 2 PPIG POSTAR2 ENCODE chr19:4442258-4442308
64251 chr5 33463925 33463925 1 + C T SKCM 33463905 + 33463885 33463925 41 AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCC AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCT < 41bp 1 0.279796820893332 1 0.568742036819458 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33463905 chr5:33463925 stopgain 1.000 1 41 hm5C_associated_SNPs_34415 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:33463893-33463929
64251 chr17 7476169 7476169 1 + A T SKCM 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA ATGTCTGCGTGCCAGGATTCCCGGTAAGAAAGGCATTTGCA < 41bp 1 0.374378481521248 1 0.146753877401352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476169 nonsynonymous SNV 0.996 1 10 hm5C_associated_SNPs_34417 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr17 7476169 7476169 1 + A T SKCM 7476181 + 7476161 7476201 41 TGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA TGTCTGCGTGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA < 41bp 1 0.710966823890865 1 0.441888242959976 experiment 0.57806635221827 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476181 chr17:7476169 nonsynonymous SNV 0.996 1 9 hm5C_associated_SNPs_34418 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr8 26227663 26227663 1 + G A SKCM 26227656 + 26227636 26227676 41 GTCTATTTTCACAGTGTTGTCATGACTGGATCTTACAATAA GTCTATTTTCACAGTGTTGTCATGACTAGATCTTACAATAA < 41bp 1 0.443778879160218 1 0.175061166286469 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227656 chr8:26227663 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_34421 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:26227614-26227725
64251 chr12 120875936 120875936 1 + G A SKCM 120875925 + 120875905 120875945 41 GGCGCTGCGGCAGTCCAGATCAAAAATGGCGGTAGTTGGTG GGCGCTGCGGCAGTCCAGATCAAAAATGGCGATAGTTGGTG < 41bp 1 0.698775397794722 1 0.234906166791916 experiment 0.602449204410556 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120875925 chr12:120875936 nonsynonymous SNV 0.012 0 32 hm5C_associated_SNPs_34423 0 0 27 UPF1 POSTAR2 GSE69586,GSM1704218 chr12:120875920-120875940
64251 chr11 66258775 66258775 1 + G C SKCM 66258782 + 66258762 66258802 41 AGCTATGAATTCCGGGGAAGCCCTTTCCAGGTGACCCGGGG AGCTATGAATTCCCGGGAAGCCCTTTCCAGGTGACCCGGGG < 41bp 1 0.123233760585334 1 0.115684568881989 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66258782 chr11:66258775 nonsynonymous SNV 0.939 0 14 hm5C_associated_SNPs_34424 0 0 1 DDX6 POSTAR2 ENCODE chr11:66258716-66258790
64251 chr17 77758698 77758698 1 + T G SKCM 77758688 + 77758668 77758708 41 CCGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGAC CCGCCCAGCACTGGACAGAACCCGTCAGTGGCCGTTCAGAC < 41bp 1 0.253672872896169 1 0.0630244612693787 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758688 chr17:77758698 nonsynonymous SNV 0.011 0 31 hm5C_associated_SNPs_34426 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr17 77758698 77758698 1 + T G SKCM 77758689 + 77758669 77758709 41 CGCCCAGCACTGGACAGAACCCGTCAGTGTCCGTTCAGACC CGCCCAGCACTGGACAGAACCCGTCAGTGGCCGTTCAGACC < 41bp 1 0.0798842845954472 1 0.289406806230545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758689 chr17:77758698 nonsynonymous SNV 0.011 0 30 hm5C_associated_SNPs_34427 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:77758680-77758700
64251 chr16 75682397 75682397 1 + C T SKCM 75682389 + 75682369 75682409 41 CTGGGGGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTCAA CTGGGGGACGCGCCGGTGAGCCCCTCCTTCCAGAAGCTCAA < 41bp 1 0.326922541639028 1 0.0962905287742615 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75682389 chr16:75682397 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_34428 0 0 4 FASTKD2 POSTAR2 ENCODE chr16:75682348-75682406
64251 chr16 75682397 75682397 1 + C T SKCM 75682394 + 75682374 75682414 41 GGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTCAAGCGGA GGACGCGCCGGTGAGCCCCTCCTTCCAGAAGCTCAAGCGGA < 41bp 1 0.043554427999303 1 0.747741460800171 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TERF2IP ENSG00000166848 CDS Human protein_coding chr16:75682394 chr16:75682397 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_34429 0 0 4 FASTKD2 POSTAR2 ENCODE chr16:75682348-75682406
64251 chr19 42848889 42848889 1 + C T SKCM 42848907 + 42848887 42848927 41 TTCGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT TTTGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT < 41bp 1 0.34670506779496 1 0.201928704977036 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848907 chr19:42848889 synonymous SNV . 0 3 hm5C_associated_SNPs_34430 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42848867-42848905
64251 chr2 32828135 32828135 1 + C A SKCM 32828127 + 32828107 32828147 41 GACCAGAAGAGAAGTGGAATCCTCAGACCTCAAGCTTTTTG GACCAGAAGAGAAGTGGAATCCTCAGACATCAAGCTTTTTG < 41bp 1 0.105514002282427 1 0.0665567815303802 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32828127 chr2:32828135 synonymous SNV . 0 29 hm5C_associated_SNPs_34431 0 0 2 PRPF8 POSTAR2 ENCODE chr2:32828089-32828154
64251 chr1 109643057 109643057 1 + C T SKCM 109643037 + 109643017 109643057 41 CCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCTCCTC CCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCTCCTT < 41bp 1 0.672261336915193 1 0.209209769964218 experiment 0.655477326169615 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643037 chr1:109643057 . . 0 41 hm5C_associated_SNPs_34432 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643057 109643057 1 + C T SKCM 109643050 + 109643030 109643070 41 GGCCGACCCGAAATGAAAAGCTCTCCTCCTGCGAAGCCCCC GGCCGACCCGAAATGAAAAGCTCTCCTTCTGCGAAGCCCCC < 41bp 1 0.176375900045502 1 0.0476024150848389 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643050 chr1:109643057 . . 0 28 hm5C_associated_SNPs_34433 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643057 109643057 1 + C T SKCM 109643068 + 109643048 109643088 41 AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG AGCTCTCCTTCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG < 41bp 1 0.154950487283158 1 0.153657376766205 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643068 chr1:109643057 . . 0 10 hm5C_associated_SNPs_34434 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643057 109643057 1 + C T SKCM 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT TCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT < 41bp 1 0.718018944374395 1 0.0826363861560822 experiment 0.56396211125121 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643057 . . 0 1 hm5C_associated_SNPs_34435 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643058 109643058 1 + C T SKCM 109643050 + 109643030 109643070 41 GGCCGACCCGAAATGAAAAGCTCTCCTCCTGCGAAGCCCCC GGCCGACCCGAAATGAAAAGCTCTCCTCTTGCGAAGCCCCC < 41bp 1 0.188295261666186 1 0.109279960393906 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643050 chr1:109643058 . . 0 29 hm5C_associated_SNPs_34436 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643058 109643058 1 + C T SKCM 109643068 + 109643048 109643088 41 AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG AGCTCTCCTCTTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG < 41bp 1 0.142876724847597 1 0.144681662321091 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643068 chr1:109643058 . . 0 11 hm5C_associated_SNPs_34437 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643058 109643058 1 + C T SKCM 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT CTTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT < 41bp 1 0.708843396366046 1 0.0968379080295563 experiment 0.582313207267908 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643058 . . 0 2 hm5C_associated_SNPs_34438 0 0 58 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chrX 73041549 73041549 1 - G A SKCM 73041535 - 73041515 73041555 41 CCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAGGA CCTTTTTCGTTTTTAAATCACTCACAGAGGGTGGGACAGGA < 41bp 1 0.102551649798977 1 0.0677701532840729 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041535 chrX:73041549 . . 0 7 hm5C_associated_SNPs_34442 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041549 73041549 1 - G A SKCM 73041537 - 73041517 73041557 41 GACCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAG GACCTTTTTCGTTTTTAAATCACTCACAGAGGGTGGGACAG < 41bp 1 0.0874526058710721 1 0.079292505979538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041537 chrX:73041549 . . 0 9 hm5C_associated_SNPs_34443 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041549 73041549 1 - G A SKCM 73041554 - 73041534 73041574 41 AGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACT AGGCCTGGCTGGGCTTTGACCTTTTTCGTTTTTAAATCACT < 41bp 1 0.0131663676950255 1 0.0880817472934723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041554 chrX:73041549 . . 0 26 hm5C_associated_SNPs_34444 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041549 73041549 1 - G A SKCM 73041561 - 73041541 73041581 41 TAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTA TAAATGTAGGCCTGGCTGGGCTTTGACCTTTTTCGTTTTTA < 41bp 1 0.0297149316841894 1 0.0456334054470062 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041561 chrX:73041549 . . 0 33 hm5C_associated_SNPs_34445 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041549 73041549 1 - G A SKCM 73041566 - 73041546 73041586 41 TTCTCTAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGT TTCTCTAAATGTAGGCCTGGCTGGGCTTTGACCTTTTTCGT < 41bp 1 0.446994974412113 1 0.228501230478287 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041566 chrX:73041549 . . 0 38 hm5C_associated_SNPs_34446 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chr12 104492131 104492131 1 + C T SKCM 104492140 + 104492120 104492160 41 GAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGG GAAAGAGACTCTTTCAAATCCAGTGGCCACAGTGAAAGCGG < 41bp 1 0.448530188773693 1 0.363799870014191 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104492140 chr12:104492131 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_34447 0 0 1 FUS POSTAR2 SRX029328 chr12:104492126-104492151
64251 chr11 108559732 108559732 1 + C T SKCM 108559748 + 108559728 108559768 41 ATTCCTTTTTGAGAAGCCATCTGAAGAAGAAGAGCATTGTA ATTCTTTTTTGAGAAGCCATCTGAAGAAGAAGAGCATTGTA < 41bp 1 0.613630332547168 1 0.868967175483704 experiment 0.772739334905665 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX10 ENSG00000178105 CDS Human protein_coding chr11:108559748 chr11:108559732 synonymous SNV . 0 5 hm5C_associated_SNPs_34448 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:108559703-108559753
64251 chr20 30381757 30381757 1 + C T SKCM 30381750 + 30381730 30381770 41 CAAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGA CAAGAACTGTGGAAATATGCCCTTTCTTGTTTGATTCTCGA < 41bp 1 0.0217362454242113 1 0.0465232729911804 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381750 chr20:30381757 nonsynonymous SNV 0.988 4 28 hm5C_associated_SNPs_34449 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr20 30381757 30381757 1 + C T SKCM 30381751 + 30381731 30381771 41 AAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGAG AAGAACTGTGGAAATATGCCCTTTCTTGTTTGATTCTCGAG < 41bp 1 0.0398446610596595 1 0.0785481035709381 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381751 chr20:30381757 nonsynonymous SNV 0.988 4 27 hm5C_associated_SNPs_34450 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr5 110097150 110097150 1 + A G SKCM 110097160 + 110097140 110097180 41 TGTGCAGAGTATGTTGGATGCTTATTTTCCAGAACTTATTG TGTGCAGAGTGTGTTGGATGCTTATTTTCCAGAACTTATTG < 41bp 1 0.327303197837175 1 0.0768746435642242 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097160 chr5:110097150 nonsynonymous SNV 0.999 1 11 hm5C_associated_SNPs_34451 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr11 65829377 65829377 1 + C T SKCM 65829381 + 65829361 65829401 41 GAATGCCCACAAGGTCCCTCCCCCATGGCTGATTGCCATGC GAATGCCCACAAGGTCTCTCCCCCATGGCTGATTGCCATGC < 41bp 1 0.575179007214974 1 0.363151490688324 experiment 0.849641985570053 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65829381 chr11:65829377 nonsynonymous SNV 0.975 4 17 hm5C_associated_SNPs_34452 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65829360-65829380
64251 chrX 152958983 152958983 1 + C T SKCM 152958977 + 152958957 152958997 41 TTCTTTGCTGGCTTCGTGGTCTTCTCCATCCTGGGCTTCAT TTCTTTGCTGGCTTCGTGGTCTTCTCTATCCTGGGCTTCAT < 41bp 1 0.145062560809125 1 0.0418918132781982 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958977 chrX:152958983 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_34453 0 0 9 BUD13 POSTAR2 ENCODE chrX:152958981-152959038
64251 chr12 123028725 123028725 1 + C T SKCM 123028737 + 123028717 123028757 41 AATCAAGTCCAGTTTTATTTCTACTGAAAATTATCATACTC AATCAAGTTCAGTTTTATTTCTACTGAAAATTATCATACTC < 41bp 1 0.306175193916776 1 0.528101027011871 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123028737 chr12:123028725 nonsynonymous SNV 0.985 1 9 hm5C_associated_SNPs_34454 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:123028709-123028729
64251 chr16 30941555 30941555 1 + G A SKCM 30941537 + 30941517 30941557 41 TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCGGG TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCAGG < 41bp 1 0.403038661498008 1 0.8157958984375 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941537 chr16:30941555 synonymous SNV . 0 39 hm5C_associated_SNPs_34455 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30941518-30941558
64251 chr8 56864630 56864630 1 + G A SKCM 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGGCTATTACATCTCTCCACAAATCACTTTTCCCT < 41bp 1 0.726509685934057 1 0.903475284576416 experiment 0.546980628131887 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864630 nonsynonymous SNV 0.995 4 27 hm5C_associated_SNPs_34456 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr1 156756708 156756708 1 + C T SKCM 156756700 + 156756680 156756720 41 ACAGTGATGAGGAAGTAGCCCCCGAAAACTTTTTCTCCCTC ACAGTGATGAGGAAGTAGCCCCCGAAAATTTTTTCTCCCTC < 41bp 1 0.669377029972181 1 0.352203786373138 experiment 0.661245940055638 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756700 chr1:156756708 synonymous SNV . 0 29 hm5C_associated_SNPs_34457 0 0 15 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:156756700-156756720
64251 chr14 65209922 65209922 1 + G A SKCM 65209911 + 65209891 65209931 41 ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTGCTCCAAGTA ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTACTCCAAGTA < 41bp 1 0.249381169058292 1 0.0989115238189697 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209911 chr14:65209922 nonsynonymous SNV 0.992 0 32 hm5C_associated_SNPs_34460 0 0 1 DDX55 POSTAR2 ENCODE chr14:65209866-65209928
64251 chr7 141341091 141341091 1 + C T SKCM 141341103 + 141341083 141341123 41 CACGGGACCTACAGAGAGACCTCCCAATGAACCAGAGGAGA CACGGGACTTACAGAGAGACCTCCCAATGAACCAGAGGAGA < 41bp 1 0.321703754871213 1 0.099267452955246 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141341103 chr7:141341091 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_34466 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141341069-141341096
64251 chr22 24466778 24466778 1 + C T SKCM 24466762 + 24466742 24466782 41 CTGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCA CTGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATTGGCA < 41bp 1 0.16064288036865 1 0.84731388092041 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466762 chr22:24466778 nonsynonymous SNV 0.310 2 37 hm5C_associated_SNPs_34468 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr22 24466778 24466778 1 + C T SKCM 24466763 + 24466743 24466783 41 TGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAG TGTACTAGGACTCCTTGCTCCGGCTGAAGGACTATTGGCAG < 41bp 1 0.354528871434959 1 0.669229090213776 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466763 chr22:24466778 nonsynonymous SNV 0.310 2 36 hm5C_associated_SNPs_34469 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr22 24466778 24466778 1 + C T SKCM 24466766 + 24466746 24466786 41 ACTAGGACTCCTTGCTCCGGCTGAAGGACTATCGGCAGTGT ACTAGGACTCCTTGCTCCGGCTGAAGGACTATTGGCAGTGT < 41bp 1 0.488989648999341 1 0.308522999286652 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24466766 chr22:24466778 nonsynonymous SNV 0.310 2 33 hm5C_associated_SNPs_34470 0 0 1 BUD13 POSTAR2 ENCODE chr22:24466746-24466784
64251 chr1 116929972 116929972 1 + C T SKCM 116929971 + 116929951 116929991 41 TGGTCCCAACGCCCTCACTCCCCCTCCCACTACTCCTGAAT TGGTCCCAACGCCCTCACTCCTCCTCCCACTACTCCTGAAT < 41bp 1 0.246271431787008 1 0.272294819355011 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116929971 chr1:116929972 synonymous SNV . 0 22 hm5C_associated_SNPs_34471 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:116929936-116929988
64251 chr17 66038262 66038262 1 + C T SKCM 66038276 + 66038256 66038296 41 TTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTG TTGATTTCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTG < 41bp 1 0.224352141118662 1 0.0919450223445892 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66038276 chr17:66038262 nonsynonymous SNV 0.997 1 7 hm5C_associated_SNPs_34472 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66038202-66038296
64251 chr4 144390252 144390252 1 + G A SKCM 144390263 + 144390243 144390283 41 TGACCAACAGAAGACCTTGGCTCTAAAGAGTACCCGGGAAG TGACCAACAAAAGACCTTGGCTCTAAAGAGTACCCGGGAAG < 41bp 1 0.548301143686773 1 0.779935598373413 experiment 0.903397712626454 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144390263 chr4:144390252 synonymous SNV . 0 10 hm5C_associated_SNPs_34473 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:144390215-144390257
64251 chr3 184026631 184026631 1 + C T SKCM 184026617 + 184026597 184026637 41 GGCCACTGAGGAGTTTCTTCCTGTTACCCCCATTCTGGAAG GGCCACTGAGGAGTTTCTTCCTGTTACCCCCATTTTGGAAG < 41bp 1 0.407368374227991 1 0.0561911761760712 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184026617 chr3:184026631 synonymous SNV . 0 35 hm5C_associated_SNPs_34476 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184026604-184026653
64251 chr7 44801181 44801181 1 + C T SKCM 44801172 + 44801152 44801192 41 TTCCAGCTGCGAGACTCAGTCTACAAGACCCTGATAATGAG TTCCAGCTGCGAGACTCAGTCTACAAGACTCTGATAATGAG < 41bp 1 0.574481016005192 1 0.875350117683411 experiment 0.851037967989616 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801172 chr7:44801181 synonymous SNV . 0 30 hm5C_associated_SNPs_34477 0 0 5 BUD13 POSTAR2 ENCODE chr7:44801161-44801192
64251 chr16 3021895 3021895 1 + C T SKCM 3021876 + 3021856 3021896 41 GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCG GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCTG < 41bp 1 0.115415388952272 1 0.0817563533782959 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAQR4 ENSG00000162073 CDS Human protein_coding chr16:3021876 chr16:3021895 synonymous SNV . 0 40 hm5C_associated_SNPs_34478 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:3021883-3021932
64251 chr17 78022533 78022533 1 + C T SKCM 78022532 + 78022512 78022552 41 GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACC GGAAGCAGAAGACGAAGGGTCTCAGCTGGTGGTTTTGGACC < 41bp 1 0.468659264582778 1 0.471945643424988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022532 chr17:78022533 synonymous SNV . 0 22 hm5C_associated_SNPs_34479 0 0 1 PPIG POSTAR2 ENCODE chr17:78022382-78022564
64251 chr17 79080642 79080642 1 + C T SKCM 79080643 + 79080623 79080663 41 CGCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCT CGCCGCCTCCCGGGCCTTCTCCGCCCAGACGGCCAGCGGCT < 41bp 1 0.502996867434134 1 0.436699509620667 experiment 0.994006265131732 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080643 chr17:79080642 nonsynonymous SNV 0.433 0 20 hm5C_associated_SNPs_34480 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr17 79080642 79080642 1 + C T SKCM 79080644 + 79080624 79080664 41 GCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGGCTT GCCGCCTCCCGGGCCTTCTCCGCCCAGACGGCCAGCGGCTT < 41bp 1 0.56757357533655 1 0.222907245159149 experiment 0.8648528493269 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080644 chr17:79080642 nonsynonymous SNV 0.433 0 19 hm5C_associated_SNPs_34481 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr1 31896635 31896635 1 + C T SKCM 31896651 + 31896631 31896671 41 TCTTCCTCTTCCTGGGGGTGCTGGTGTCCATCATTATGCTG TCTTTCTCTTCCTGGGGGTGCTGGTGTCCATCATTATGCTG < 41bp 1 0.580078278636969 1 0.259155482053757 experiment 0.839843442726062 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31896651 chr1:31896635 synonymous SNV . 0 5 hm5C_associated_SNPs_34483 0 0 1 DDX3X POSTAR2 ENCODE chr1:31896624-31896669
64251 chr13 99047565 99047565 1 + G A SKCM 99047580 + 99047560 99047600 41 CGAAGGTTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCT CGAAGATTTCCGCCGGGGAGCCGGGGTCGCACCCGAGCCCT < 41bp 1 0.721710480489525 1 0.813041388988495 experiment 0.556579039020951 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99047580 chr13:99047565 nonsynonymous SNV 0.000 0 6 hm5C_associated_SNPs_34485 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr13:99047565-99047566
64251 chr6 30886611 30886611 1 + G A SKCM 30886601 + 30886581 30886621 41 AGTGTTTAAATGTTTATCTTCAGATGCAGAGGTTGTGGTAG AGTGTTTAAATGTTTATCTTCAGATGCAGAAGTTGTGGTAG < 41bp 1 0.184754057617783 1 0.613316476345062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30886601 chr6:30886611 synonymous SNV . 0 31 hm5C_associated_SNPs_34487 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:30886541-30886639
64251 chr2 102486842 102486842 1 + A G SKCM 102486859 + 102486839 102486879 41 ATGACCCCATCCAAGGAGGGCACTCTAATCGTCCGCCAGGT ATGGCCCCATCCAAGGAGGGCACTCTAATCGTCCGCCAGGT < 41bp 1 0.109783164032313 1 0.0690830051898956 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486859 chr2:102486842 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_34490 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:102486764-102486844
64251 chr5 176524653 176524653 1 + C T SKCM 176524669 + 176524649 176524689 41 TCCCCTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAG TCCCTTTCGGGTCTGGGGTGCAGACATGAGCAAGGCTCAAG < 41bp 1 0.234227232154777 1 0.347889840602875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524669 chr5:176524653 synonymous SNV . 0 5 hm5C_associated_SNPs_34491 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr19 12924231 12924231 1 + C T SKCM 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTT < 41bp 1 0.088189676583339 1 0.0580019354820251 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924231 nonsynonymous SNV 0.076 2 41 hm5C_associated_SNPs_34499 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924231 12924231 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCCCCGTTCTTTCCACCGATATTTCCTGGAACG < 41bp 1 0.199249349694003 1 0.0666802227497101 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924231 nonsynonymous SNV 0.076 2 20 hm5C_associated_SNPs_34500 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr4 77661602 77661602 1 + G A SKCM 77661597 + 77661577 77661617 41 CCGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGG CCGCACACATCCAGTCTGGGCCGGAAGGGGCCCGGCCCAGG < 41bp 1 0.572076157638339 1 0.326100736856461 experiment 0.855847684723323 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661597 chr4:77661602 nonsynonymous SNV 0.006 1 26 hm5C_associated_SNPs_34502 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661598 + 77661578 77661618 41 CGCACACATCCAGTCTGGGCCGGAGGGGGCCCGGCCCAGGC CGCACACATCCAGTCTGGGCCGGAAGGGGCCCGGCCCAGGC < 41bp 1 0.707286588239596 1 0.596347808837891 experiment 0.585426823520807 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661598 chr4:77661602 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_34503 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661608 + 77661588 77661628 41 CAGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGG CAGTCTGGGCCGGAAGGGGCCCGGCCCAGGCAGCGCCTCGG < 41bp 1 0.25581874086825 1 0.531990945339203 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661608 chr4:77661602 nonsynonymous SNV 0.006 1 15 hm5C_associated_SNPs_34504 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661609 + 77661589 77661629 41 AGTCTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGC AGTCTGGGCCGGAAGGGGCCCGGCCCAGGCAGCGCCTCGGC < 41bp 1 0.433012426943214 1 0.414959132671356 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661609 chr4:77661602 nonsynonymous SNV 0.006 1 14 hm5C_associated_SNPs_34505 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661612 + 77661592 77661632 41 CTGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCT CTGGGCCGGAAGGGGCCCGGCCCAGGCAGCGCCTCGGCTCT < 41bp 1 0.279391582760326 1 0.121695399284363 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661612 chr4:77661602 nonsynonymous SNV 0.006 1 11 hm5C_associated_SNPs_34506 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661613 + 77661593 77661633 41 TGGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTT TGGGCCGGAAGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTT < 41bp 1 0.359451116824552 1 0.208711117506027 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661613 chr4:77661602 nonsynonymous SNV 0.006 1 10 hm5C_associated_SNPs_34507 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr4 77661602 77661602 1 + G A SKCM 77661614 + 77661594 77661634 41 GGGCCGGAGGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTC GGGCCGGAAGGGGCCCGGCCCAGGCAGCGCCTCGGCTCTTC < 41bp 1 0.635226341751663 1 0.300661087036133 experiment 0.729547316496674 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661614 chr4:77661602 nonsynonymous SNV 0.006 1 9 hm5C_associated_SNPs_34508 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:77661579-77661602
64251 chr2 113953766 113953766 1 + C T SKCM 113953757 + 113953737 113953777 41 ACAGCCAGACCTGAGAAGGCCCAGCCGTCCCTGCCAGCTGG ACAGCCAGACCTGAGAAGGCCCAGCCGTCTCTGCCAGCTGG < 41bp 1 0.0956023268081551 1 0.0834952294826508 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSD4 ENSG00000125637 CDS Human protein_coding chr2:113953757 chr2:113953766 synonymous SNV . 0 30 hm5C_associated_SNPs_34509 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831623 chr2:113953760-113953780
64251 chr1 186386745 186386745 1 + C T SKCM 186386735 + 186386715 186386755 41 ACAACACAGATGATGAACAACCAAAACAACCAATTAAAACT ACAACACAGATGATGAACAACCAAAACAACTAATTAAAACT < 41bp 1 0.290399064790971 1 0.211376547813416 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C1orf27 ENSG00000157181 CDS Human protein_coding chr1:186386735 chr1:186386745 nonsynonymous SNV 0.706 0 31 hm5C_associated_SNPs_34514 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:186386694-186386745
64251 chr11 118885705 118885705 1 + T G SKCM 118885708 + 118885688 118885728 41 TTAATTTTTTTTTCAGGTGCCACACCTCCCTGGATGATCCA TTAATTTTTTTTTCAGGGGCCACACCTCCCTGGATGATCCA < 41bp 1 0.041358926856698 1 0.0626097917556763 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118885708 chr11:118885705 synonymous SNV . 0 18 hm5C_associated_SNPs_34515 0 0 3 GRWD1 POSTAR2 ENCODE chr11:118885702-118885768
64251 chr3 127340601 127340601 1 + C T SKCM 127340602 + 127340582 127340622 41 ACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCT ACCTGAAAAGGAAAATGATTCTGCAGCAGTTCTGAGGCCCT < 41bp 1 0.688732292825714 1 0.918533205986023 experiment 0.622535414348572 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127340602 chr3:127340601 synonymous SNV . 0 20 hm5C_associated_SNPs_34516 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127340515-127340620
64251 chr6 151671190 151671190 1 + C T SKCM 151671207 + 151671187 151671227 41 CTCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC CTCTGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC < 41bp 1 0.611206797925603 1 0.712342381477356 experiment 0.777586404148793 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671207 chr6:151671190 nonsynonymous SNV 0.156 3 4 hm5C_associated_SNPs_34518 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151671164-151671203
64251 chr3 49568307 49568307 1 + C T SKCM 49568306 + 49568286 49568326 41 CCACACCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG CCACACCCTGGAGGGCCTCCCTCTTGACACTGATAAGGGTG < 41bp 1 0.420393132947558 1 0.22809636592865 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568306 chr3:49568307 synonymous SNV . 0 22 hm5C_associated_SNPs_34519 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:49568256-49568311
64251 chr1 94012458 94012458 1 + G A SKCM 94012454 + 94012434 94012474 41 AGAATCCACAAATGGGGGATCCAGGGAGTTTGCAGCCTAAA AGAATCCACAAATGGGGGATCCAGAGAGTTTGCAGCCTAAA < 41bp 1 0.435559019327714 1 0.67816823720932 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:94012454 chr1:94012458 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_34521 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:94012414-94012472
64251 chr12 6939891 6939891 1 + C T SKCM 6939910 + 6939890 6939930 41 TCCTTCCCAACCAGCTGAGGCGGCTACATGAGGCCCATGCT TTCTTCCCAACCAGCTGAGGCGGCTACATGAGGCCCATGCT < 41bp 1 0.228945460867428 1 0.703923344612122 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6939910 chr12:6939891 synonymous SNV . 0 2 hm5C_associated_SNPs_34522 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:6939891-6939892
64251 chr18 29116337 29116337 1 + C T SKCM 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCTGTCATTGACAAACCACCTGGCATGGCAGAAAAA < 41bp 1 0.139041854067266 1 0.153091311454773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116337 synonymous SNV . 0 8 hm5C_associated_SNPs_34523 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr18 29116337 29116337 1 + C T SKCM 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCTGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA < 41bp 1 0.43370387597603 1 0.157059371471405 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116337 synonymous SNV . 0 4 hm5C_associated_SNPs_34524 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr16 5121918 5121918 1 + G A SKCM 5121938 + 5121918 5121958 41 GGAAGCGCTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTA AGAAGCGCTGGCGCCGGGGGCGGGCGGCCCGGCATGTAGTA < 41bp 1 0.632159352618447 1 0.855635285377502 experiment 0.735681294763106 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5121938 chr16:5121918 stopgain 0.750 1 1 hm5C_associated_SNPs_34526 0 0 4 DDX3X POSTAR2 ENCODE chr16:5121858-5121974
64251 chr8 21859730 21859730 1 + G A SKCM 21859721 + 21859701 21859741 41 CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGC CCAAGAAGAGGACCACACCCCTGAACCAGAAGAGCGACCGC < 41bp 1 0.733581008748239 1 0.792451143264771 experiment 0.532837982503521 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859721 chr8:21859730 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_34534 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:21859705-21859730
64251 chr8 21859730 21859730 1 + G A SKCM 21859735 + 21859715 21859755 41 ACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCAT ACACCCCTGAACCAGAAGAGCGACCGCTTTCTGCACATCAT < 41bp 1 0.30171275461022 1 0.139881819486618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859735 chr8:21859730 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_34535 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:21859705-21859730
64251 chr5 33455743 33455743 1 + C T SKCM 33455756 + 33455736 33455776 41 AGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGACTGGAA AGAAAATTATTAAAGAAAAACAAGCTTTTGAAAGACTGGAA < 41bp 1 0.337319175313694 1 0.452490925788879 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33455756 chr5:33455743 synonymous SNV . 0 8 hm5C_associated_SNPs_34536 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:33455706-33455744
64251 chr19 1055316 1055316 1 + C T SKCM 1055304 + 1055284 1055324 41 AGAACCTGACAGGCCGGAACCTGTCTGACTTCCTGGTCAAG AGAACCTGACAGGCCGGAACCTGTCTGACTTCTTGGTCAAG < 41bp 1 0.116798352735852 1 0.0912027955055237 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1055304 chr19:1055316 synonymous SNV . 0 33 hm5C_associated_SNPs_34537 0 0 8 AARS POSTAR2 ENCODE chr19:1055316-1055356
64251 chr15 45353347 45353347 1 + C T SKCM 45353327 + 45353307 45353347 41 ATGAATTCTGCAAGATGGGCCGATACAATCTGTCACCTTCC ATGAATTCTGCAAGATGGGCCGATACAATCTGTCACCTTCT < 41bp 1 0.188438299045636 1 0.384788990020752 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SORD ENSG00000140263 CDS Human protein_coding chr15:45353327 chr15:45353347 synonymous SNV . 0 41 hm5C_associated_SNPs_34538 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:45353347-45353348
64251 chr5 14280515 14280515 1 + G A SKCM 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGGAAACTCATTTCCTATCTAGCCTGT < 41bp 1 0.328946648864266 1 0.11011478304863 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280515 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_34539 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chrX 77373639 77373639 1 + G A SKCM 77373646 + 77373626 77373666 41 CTTGGAGAGCCCAGAGCGACCCTTCCTGGCCATCCTGGGCG CTTGGAGAGCCCAAAGCGACCCTTCCTGGCCATCCTGGGCG < 41bp 1 0.0560102602465636 1 0.0578645467758179 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373646 chrX:77373639 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_34540 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:77373608-77373639
64251 chr14 100996347 100996347 1 + C T SKCM 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTTCTG < 41bp 1 0.182770063525522 1 0.705261051654816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996347 nonsynonymous SNV 0.998 2 38 hm5C_associated_SNPs_34541 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:100996346-100996369
64251 chr6 33656527 33656527 1 + C T SKCM 33656530 + 33656510 33656550 41 AACATCATCATTGCCTTCTTCTACCCTTACATGGAGGGCGC AACATCATCATTGCCTTTTTCTACCCTTACATGGAGGGCGC < 41bp 1 0.172969993353041 1 0.261138379573822 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33656530 chr6:33656527 synonymous SNV . 0 18 hm5C_associated_SNPs_34542 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:33656523-33656554
64251 chrX 114877744 114877744 1 + C T SKCM 114877725 + 114877705 114877745 41 TGATGTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTCG TGATGTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTTG < 41bp 1 0.438047872238359 1 0.250882804393768 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLS3 ENSG00000102024 CDS Human protein_coding chrX:114877725 chrX:114877744 synonymous SNV . 0 40 hm5C_associated_SNPs_34543 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:114877714-114877756
64251 chr17 16342728 16342728 1 + G A SKCM 16342711 + 16342691 16342731 41 CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTA CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTGAGTA < 41bp 1 0.368435583593854 1 0.169041395187378 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342711 chr17:16342728 . . 0 38 hm5C_associated_SNPs_34544 0 0 7 BUD13 POSTAR2 ENCODE chr17:16342720-16342801
64251 chr17 16342728 16342728 1 + G A SKCM 16342716 + 16342696 16342736 41 CACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTAAGTTG CACAGTGGGGGTGTGCAAACCCGAGAGAACTGAGTAAGTTG < 41bp 1 0.600298851082769 1 0.547478497028351 experiment 0.799402297834463 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342716 chr17:16342728 . . 0 33 hm5C_associated_SNPs_34545 0 0 7 BUD13 POSTAR2 ENCODE chr17:16342720-16342801
64251 chr12 112579928 112579928 1 + C T SKCM 112579938 + 112579918 112579958 41 GAATAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAGAGA GAATAGAGGCTAACAGCCCCCCAAAGAGGGTGGTGAAGAGA < 41bp 1 0.296941423952046 1 0.383893102407455 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112579938 chr12:112579928 stopgain 0.092 0 11 hm5C_associated_SNPs_34546 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:112579921-112579942
64251 chr17 16342727 16342727 1 + G A SKCM 16342711 + 16342691 16342731 41 CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTA CGGCCCACAGTGGGGGTGTGCAAACCCGAGAGAACTAGGTA < 41bp 1 0.350898470044131 1 0.211453765630722 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342711 chr17:16342727 . . 0 37 hm5C_associated_SNPs_34547 0 0 8 BUD13 POSTAR2 ENCODE chr17:16342720-16342801
64251 chr17 16342727 16342727 1 + G A SKCM 16342716 + 16342696 16342736 41 CACAGTGGGGGTGTGCAAACCCGAGAGAACTGGGTAAGTTG CACAGTGGGGGTGTGCAAACCCGAGAGAACTAGGTAAGTTG < 41bp 1 0.593461784406094 1 0.603725492954254 experiment 0.813076431187811 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342716 chr17:16342727 . . 0 32 hm5C_associated_SNPs_34548 0 0 8 BUD13 POSTAR2 ENCODE chr17:16342720-16342801
64251 chrX 73046878 73046878 1 - C T SKCM 73046871 - 73046851 73046891 41 GAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAA GAGGACTAAGATGAAAAGCCCATGTTCCAAGATAGATAGAA < 41bp 1 0.0809431640738863 1 0.0677401721477509 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046871 chrX:73046878 . . 0 14 hm5C_associated_SNPs_34549 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046878 73046878 1 - C T SKCM 73046873 - 73046853 73046893 41 CCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAG CCGAGGACTAAGATGAAAAGCCCATGTTCCAAGATAGATAG < 41bp 1 0.147979556369712 1 0.0549954771995544 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046873 chrX:73046878 . . 0 16 hm5C_associated_SNPs_34550 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046878 73046878 1 - C T SKCM 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGAAAAGC < 41bp 1 0.186956941077545 1 0.450756698846817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046878 . . 0 36 hm5C_associated_SNPs_34551 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046878 73046878 1 - C T SKCM 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGAAAAG < 41bp 1 0.401909317860284 1 0.121335327625275 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046878 . . 0 37 hm5C_associated_SNPs_34552 0 0 72 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chr14 55818527 55818527 1 + C T SKCM 55818536 + 55818516 55818556 41 ATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTT ATTTTAAACTCTTGTGAAGACCCAGTTCCAGGGATGTTGTT < 41bp 1 0.29804903250001 1 0.0718779563903809 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818536 chr14:55818527 synonymous SNV . 0 12 hm5C_associated_SNPs_34554 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:55818504-55818528
64251 chr14 65209912 65209912 1 + C T SKCM 65209911 + 65209891 65209931 41 ACCTTCAGCTGGCCCGACGTCCGTGAGCTCTGCTCCAAGTA ACCTTCAGCTGGCCCGACGTCTGTGAGCTCTGCTCCAAGTA < 41bp 1 0.491179856704049 1 0.309542298316956 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209911 chr14:65209912 nonsynonymous SNV 0.498 4 22 hm5C_associated_SNPs_34555 0 0 1 DDX55 POSTAR2 ENCODE chr14:65209866-65209928
64251 chr19 42729905 42729905 1 + C T SKCM 42729916 + 42729896 42729936 41 CTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACC CTCCAAGTCTTTTGCCTCAGCTTCCCGGCTGTCCCGGCACC < 41bp 1 0.167746814179853 1 0.0725633800029755 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729916 chr19:42729905 synonymous SNV . 0 10 hm5C_associated_SNPs_34556 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42729905-42729906
64251 chrX 48663912 48663912 1 + C T SKCM 48663902 + 48663882 48663922 41 GAGCAACTGATCCAGGAGGGCCTCCTAGATCGCTGCGTGTC GAGCAACTGATCCAGGAGGGCCTCCTAGATTGCTGCGTGTC < 41bp 1 0.0566647524083019 1 0.0460980236530304 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48663902 chrX:48663912 nonsynonymous SNV 0.990 4 31 hm5C_associated_SNPs_34557 0 0 8 BUD13 POSTAR2 ENCODE chrX:48663901-48663924
64251 chr20 62373342 62373342 1 + C T SKCM 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCTGTCACC < 41bp 1 0.0782550053035241 1 0.0864595472812653 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373342 nonsynonymous SNV 0.394 3 35 hm5C_associated_SNPs_34560 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr1 154207139 154207139 1 + G A SKCM 154207128 + 154207108 154207148 41 CCAGAAGGATGGTGGCCAGACGGAATCCAATGAGGAAGGCA CCAGAAGGATGGTGGCCAGACGGAATCCAATAAGGAAGGCA < 41bp 1 0.797195894708609 1 0.463515490293503 experiment 0.405608210582782 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207128 chr1:154207139 nonsynonymous SNV 0.967 1 32 hm5C_associated_SNPs_34562 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr1 154207139 154207139 1 + G A SKCM 154207147 + 154207127 154207167 41 ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGA ACGGAATCCAATAAGGAAGGCAAAGAAAATCGAGACCGGGA < 41bp 1 0.344162184985096 1 0.240527182817459 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207147 chr1:154207139 nonsynonymous SNV 0.967 1 13 hm5C_associated_SNPs_34563 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr5 156786131 156786131 1 + A T SKCM 156786136 + 156786116 156786156 41 CTGTGGTCATGGAGGAACTGCTAAAGATTGTGAAGAGCTTG CTGTGGTCATGGAGGTACTGCTAAAGATTGTGAAGAGCTTG < 41bp 1 0.343141791303657 1 0.336810827255249 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156786136 chr5:156786131 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_34564 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:156786115-156786153
64251 chrX 84502582 84502582 1 + G A SKCM 84502590 + 84502570 84502610 41 TTGCTAAGTATGGATTCAGGCGGTGGAAGTCTTGGATTGCA TTGCTAAGTATGAATTCAGGCGGTGGAAGTCTTGGATTGCA < 41bp 1 0.565570493389037 1 0.603775858879089 experiment 0.868859013221926 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84502590 chrX:84502582 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_34566 0 0 33 U2AF2 POSTAR2 GSE83923,CSM2221661 chrX:84502540-84502600
64251 chr1 54665994 54665994 1 + G A SKCM 54665990 + 54665970 54666010 41 CGGCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATG CGGCCTTGGGGGCTTCGGGGCCCCAAGACGCGGGGCGTATG < 41bp 1 0.576066616688399 1 0.254242569208145 experiment 0.847866766623203 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665990 chr1:54665994 synonymous SNV . 0 25 hm5C_associated_SNPs_34567 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:54665964-54665994
64251 chr1 54665994 54665994 1 + G A SKCM 54665992 + 54665972 54666012 41 GCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATGAG GCCTTGGGGGCTTCGGGGCCCCAAGACGCGGGGCGTATGAG < 41bp 1 0.379048796119417 1 0.257609516382217 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665992 chr1:54665994 synonymous SNV . 0 23 hm5C_associated_SNPs_34568 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:54665964-54665994
64251 chr7 150769181 150769181 1 + C T SKCM 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATTTCACT < 41bp 1 0.0547109386127748 1 0.0547627508640289 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769181 synonymous SNV . 0 36 hm5C_associated_SNPs_34569 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:150769160-150769200
64251 chr2 171822314 171822314 1 + C T SKCM 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGGTCTGCCACCTCTTTCTTCCATGCCT < 41bp 1 0.112016495861068 1 0.0827114582061768 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822314 nonsynonymous SNV 0.907 0 30 hm5C_associated_SNPs_34570 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr19 50548282 50548282 1 + C T SKCM 50548302 + 50548282 50548322 41 CGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAAC TGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAAC < 41bp 1 0.315574490979433 1 0.0886296927928925 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548302 chr19:50548282 synonymous SNV . 0 1 hm5C_associated_SNPs_34571 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:50548280-50548300
64251 chr16 29912768 29912768 1 + G A SKCM 29912748 + 29912728 29912768 41 GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTA < 41bp 1 0.644898200575897 1 0.366707026958466 experiment 0.710203598848207 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912748 chr16:29912768 stopgain 1.000 1 41 hm5C_associated_SNPs_34572 0 0 2 SND1 POSTAR2 ENCODE chr16:29912760-29912845
64251 chr5 172421790 172421790 1 + C T SKCM 172421784 + 172421764 172421804 41 TTTTTTTTTTTTAGAGTTATCATTACCATGTTGGTGACCTG TTTTTTTTTTTTAGAGTTATCATTACTATGTTGGTGACCTG < 41bp 1 0.220705074546913 1 0.361826181411743 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATP6V0E1 ENSG00000113732 CDS Human protein_coding chr5:172421784 chr5:172421790 synonymous SNV . 0 27 hm5C_associated_SNPs_34577 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:172421780-172421800
64251 chr1 162040006 162040006 1 + G A SKCM 162040009 + 162039989 162040029 41 AACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA AACCTTGTGGACGATGGACACGACCTGCGGATCCCCTTGCA < 41bp 1 0.420540945007372 1 0.460889011621475 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162040009 chr1:162040006 synonymous SNV . 0 18 hm5C_associated_SNPs_34578 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162039974-162040029
64251 chr11 68213994 68213994 1 + C T SKCM 68213986 + 68213966 68214006 41 CTCTTCAAACATTCCGGCCACTGCGAGACCGTACAGGTAGG CTCTTCAAACATTCCGGCCACTGCGAGATCGTACAGGTAGG < 41bp 1 0.330850200466586 1 0.164480209350586 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68213986 chr11:68213994 nonsynonymous SNV 0.065 1 29 hm5C_associated_SNPs_34579 0 0 4 BUD13 POSTAR2 ENCODE chr11:68213965-68214000
64251 chr8 42977919 42977919 1 + C T SKCM 42977935 + 42977915 42977955 41 GACTCCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA GACTTCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA < 41bp 1 0.26917857469145 1 0.0798466801643372 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POMK ENSG00000185900 CDS Human protein_coding chr8:42977935 chr8:42977919 nonsynonymous SNV 0.851 1 5 hm5C_associated_SNPs_34580 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977840-42978000
64251 chr14 97002296 97002296 1 + C T SKCM 97002283 + 97002263 97002303 41 ATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAA ATACCCACAACAGAACTCCACGTACAATGTGTCTGTTTCAA < 41bp 1 0.0907260717416762 1 0.0719242691993713 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97002283 chr14:97002296 synonymous SNV . 0 34 hm5C_associated_SNPs_34581 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:97002244-97002352
64251 chr20 57289638 57289638 1 + C T SKCM 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCGAGACAACAGCCCCAGCTTCTGTGCTGGCCTC < 41bp 1 0.397442745765384 1 0.390626817941666 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289638 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_34582 0 0 3 GRWD1 POSTAR2 ENCODE chr20:57289633-57289721
64251 chr22 31658772 31658772 1 + C T SKCM 31658771 + 31658751 31658791 41 GGGGACACTGAGGAGACGTTCCCTAAGGTGCCACCTCCCAC GGGGACACTGAGGAGACGTTCTCTAAGGTGCCACCTCCCAC < 41bp 1 0.663753158419088 1 0.614999830722809 experiment 0.672493683161825 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658771 chr22:31658772 synonymous SNV . 0 22 hm5C_associated_SNPs_34584 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831621 chr22:31658760-31658780
64251 chr16 29708339 29708339 1 + C G SKCM 29708327 + 29708307 29708347 41 TGCCCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACT TGCCCAGCAGGCGGTGCGGGCGGCCAGACAGGGGGCTGACT < 41bp 1 0.393921498141035 1 0.470549643039703 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708327 chr16:29708339 nonsynonymous SNV 0.003 0 33 hm5C_associated_SNPs_34586 0 0 3 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr16 29708339 29708339 1 + C G SKCM 29708330 + 29708310 29708350 41 CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTCA CCAGCAGGCGGTGCGGGCGGCCAGACAGGGGGCTGACTTCA < 41bp 1 0.46118756245409 1 0.275184988975525 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708330 chr16:29708339 nonsynonymous SNV 0.003 0 30 hm5C_associated_SNPs_34587 0 0 3 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr10 71855426 71855426 1 + G A SKCM 71855433 + 71855413 71855453 41 TCCTTAACCCAGAGTGACATCAGCCATATTGGCTCCATGAG TCCTTAACCCAGAATGACATCAGCCATATTGGCTCCATGAG < 41bp 1 0.372053187466491 1 0.191115975379944 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71855433 chr10:71855426 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_34588 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:71855426-71855453
64251 chr22 24573545 24573545 1 + C T SKCM 24573547 + 24573527 24573567 41 TGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCT TGAGACTCAGCCCCTGAGTTCTCCCCCAACAGCTGCCAGCT < 41bp 1 0.125642529942331 1 0.307856827974319 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573547 chr22:24573545 synonymous SNV . 0 19 hm5C_associated_SNPs_34589 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573545 24573545 1 + C T SKCM 24573549 + 24573529 24573569 41 AGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCC AGACTCAGCCCCTGAGTTCTCCCCCAACAGCTGCCAGCTCC < 41bp 1 0.188604654822213 1 0.416711717844009 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573549 chr22:24573545 synonymous SNV . 0 17 hm5C_associated_SNPs_34590 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573545 24573545 1 + C T SKCM 24573550 + 24573530 24573570 41 GACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCA GACTCAGCCCCTGAGTTCTCCCCCAACAGCTGCCAGCTCCA < 41bp 1 0.21300043188166 1 0.342097461223602 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573550 chr22:24573545 synonymous SNV . 0 16 hm5C_associated_SNPs_34591 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573545 24573545 1 + C T SKCM 24573551 + 24573531 24573571 41 ACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCAA ACTCAGCCCCTGAGTTCTCCCCCAACAGCTGCCAGCTCCAA < 41bp 1 0.243131515691459 1 0.179991394281387 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573551 chr22:24573545 synonymous SNV . 0 15 hm5C_associated_SNPs_34592 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr17 73481987 73481987 1 + C T SKCM 73481976 + 73481956 73481996 41 TGTGGAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTCC TGTGGAGAAGCAGCTTCCTCCACCACAGTAATCGCTGCTCC < 41bp 1 0.706891750985614 1 0.750637590885162 experiment 0.586216498028773 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73481976 chr17:73481987 synonymous SNV . 0 32 hm5C_associated_SNPs_34595 0 0 1 PPIG POSTAR2 ENCODE chr17:73481951-73481993
64251 chr7 154738098 154738098 1 - G T SKCM 154738116 - 154738096 154738136 41 GATGTTCACAATGCAGAGTTCGTTCTGACTGGAGTGCTCAC GATGTTCACAATGCAGAGTTCGTTCTGACTGGAGTGCTAAC < 41bp 1 0.0421322693860903 1 0.0186048448085785 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAXIP1 ENSG00000157212 CDS Human protein_coding chr7:154738116 chr7:154738098 synonymous SNV . 0 39 hm5C_associated_SNPs_34596 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:154738079-154738119
64251 chr6 43110004 43110004 1 + A T SKCM 43110021 + 43110001 43110041 41 AACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT AACTTCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT < 41bp 1 0.0673271849347653 1 0.0580363273620605 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK7 ENSG00000112655 CDS Human protein_coding chr6:43110021 chr6:43110004 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_34597 0 0 1 SND1 POSTAR2 ENCODE chr6:43110002-43110037
64251 chr17 73481988 73481988 1 + C T SKCM 73481976 + 73481956 73481996 41 TGTGGAGAAGCAGCTTCCTCCACCACAGTAACCGCTGCTCC TGTGGAGAAGCAGCTTCCTCCACCACAGTAACTGCTGCTCC < 41bp 1 0.675221379068749 1 0.842195153236389 experiment 0.649557241862503 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73481976 chr17:73481988 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_34598 0 0 1 PPIG POSTAR2 ENCODE chr17:73481951-73481993
64251 chr15 99460079 99460079 1 + C T SKCM 99460083 + 99460063 99460103 41 AAGTCTTTGAGAATTTCCTGCACAACTCCATCTTCGTGCCC AAGTCTTTGAGAATTTTCTGCACAACTCCATCTTCGTGCCC < 41bp 1 0.280794519926295 1 0.113174676895142 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99460083 chr15:99460079 synonymous SNV . 0 17 hm5C_associated_SNPs_34599 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:99460073-99460098
64251 chr9 109689800 109689800 1 + C T SKCM 109689820 + 109689800 109689840 41 CGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA TGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA < 41bp 1 0.0281185452232186 1 0.124807804822922 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109689820 chr9:109689800 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_34602 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:109689796-109689820
64251 chr17 38151308 38151308 1 + C T SKCM 38151309 + 38151289 38151329 41 GCTCACTCATGCCCTATTTCCTTCTGACTCAAGGTAAGGCT GCTCACTCATGCCCTATTTTCTTCTGACTCAAGGTAAGGCT < 41bp 1 0.342865022861072 1 0.0460131466388702 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38151309 chr17:38151308 synonymous SNV . 0 20 hm5C_associated_SNPs_34604 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38151284-38151317
64251 chr3 38284240 38284240 1 + C T SKCM 38284259 + 38284239 38284279 41 CCGAGTGAAAGAATCAATATCAAATTCTGAGGTAAGTAATT CTGAGTGAAAGAATCAATATCAAATTCTGAGGTAAGTAATT < 41bp 1 0.115759286916779 1 0.172987163066864 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38284259 chr3:38284240 stopgain 0.995 1 2 hm5C_associated_SNPs_34605 0 0 12 U2AF2 POSTAR2 GSE83923,CSM2221657 chr3:38284220-38284240
64251 chr16 4431025 4431025 1 + C T SKCM 4431033 + 4431013 4431053 41 GGTGCCCCGAGACGTGCCACCCGACACGGTGGGGCTGTACG GGTGCCCCGAGATGTGCCACCCGACACGGTGGGGCTGTACG < 41bp 1 0.117300174871982 1 0.125093519687653 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control VASN ENSG00000168140 CDS Human protein_coding chr16:4431033 chr16:4431025 synonymous SNV . 0 13 hm5C_associated_SNPs_34607 0 0 1 DDX3X POSTAR2 ENCODE chr16:4430998-4431032
64251 chr3 150321206 150321206 1 + C T SKCM 150321221 + 150321201 150321241 41 GAGGCCTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT GAGGCTTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT < 41bp 1 0.79580602811781 1 0.500375807285309 experiment 0.40838794376438 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SELENOT ENSG00000198843 CDS Human protein_coding chr3:150321221 chr3:150321206 synonymous SNV . 0 6 hm5C_associated_SNPs_34609 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:150321200-150321220
64251 chr9 130197476 130197476 1 + C T SKCM 130197488 + 130197468 130197508 41 GGAAAGTCCAGGAGCCTTGTCCTACTAGGTAAGGAAACTGT GGAAAGTCTAGGAGCCTTGTCCTACTAGGTAAGGAAACTGT < 41bp 1 0.0272525858096019 1 0.149799227714539 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130197488 chr9:130197476 synonymous SNV . 0 9 hm5C_associated_SNPs_34610 0 0 1 PPIG POSTAR2 ENCODE chr9:130197427-130197493
64251 chr12 112926270 112926270 1 + C T SKCM 112926274 + 112926254 112926294 41 ATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT ATTGGCCGGACAGGGATGTTCATTGTGATTGATATTCTTAT < 41bp 1 0.191209225188158 1 0.0260994136333466 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926274 chr12:112926270 nonsynonymous SNV 0.971 5 17 hm5C_associated_SNPs_34611 7 0 1 U2AF2 POSTAR2 ENCODE chr12:112926229-112926279
64251 chr3 150321205 150321205 1 + C T SKCM 150321221 + 150321201 150321241 41 GAGGCCTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT GAGGTCTCGGCCAATCTGGGCGGCGTGCCCAGCAAGAGATT < 41bp 1 0.78231099576663 1 0.451493233442307 experiment 0.43537800846674 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SELENOT ENSG00000198843 CDS Human protein_coding chr3:150321221 chr3:150321205 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_34612 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:150321200-150321220
64251 chr19 45493754 45493754 1 + G A SKCM 45493744 + 45493724 45493764 41 CAGTCATTCGTGGTCCTCCTCTACATCCTGGACAACGAGAC CAGTCATTCGTGGTCCTCCTCTACATCCTGAACAACGAGAC < 41bp 1 0.719091001211297 1 0.746989130973816 experiment 0.561817997577406 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493744 chr19:45493754 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_34616 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr19 45493754 45493754 1 + G A SKCM 45493756 + 45493736 45493776 41 GTCCTCCTCTACATCCTGGACAACGAGACCAACTTCGTGGT GTCCTCCTCTACATCCTGAACAACGAGACCAACTTCGTGGT < 41bp 1 0.518946365786823 1 0.113783627748489 experiment 0.962107268426354 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493756 chr19:45493754 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_34617 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr19 45493754 45493754 1 + G A SKCM 45493765 + 45493745 45493785 41 TACATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAG TACATCCTGAACAACGAGACCAACTTCGTGGTCCAGGTCAG < 41bp 1 0.294213252505011 1 0.0545165836811066 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493765 chr19:45493754 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_34618 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr7 43664264 43664264 1 + C T SKCM 43664244 + 43664224 43664264 41 TCCAAGAAGGTCATTCTGTGCCTGAAATTAATTCGGATACC TCCAAGAAGGTCATTCTGTGCCTGAAATTAATTCGGATACT < 41bp 1 0.350346609612305 1 0.120567709207535 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control STK17A ENSG00000164543 CDS Human protein_coding chr7:43664244 chr7:43664264 synonymous SNV . 0 41 hm5C_associated_SNPs_34619 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr7:43664253-43664269
64251 chr4 155486961 155486961 1 + G A SKCM 155486953 + 155486933 155486973 41 ATTATATTTCTGCCTCATTCCTTGTAGGGTTTCTTCAGTGC ATTATATTTCTGCCTCATTCCTTGTAGGATTTCTTCAGTGC < 41bp 1 0.120168202684517 1 0.385300755500793 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGB ENSG00000171564 CDS Human protein_coding chr4:155486953 chr4:155486961 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_34621 0 0 2 LIN28B POSTAR2 ENCODE chr4:155486959-155486974
64251 chr20 30381768 30381768 1 + C T SKCM 30381750 + 30381730 30381770 41 CAAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGA CAAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTTGA < 41bp 1 0.0192132767759442 1 0.0679475963115692 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381750 chr20:30381768 stopgain 0.998 1 39 hm5C_associated_SNPs_34622 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr20 30381768 30381768 1 + C T SKCM 30381751 + 30381731 30381771 41 AAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTCGAG AAGAACTGTGGAAATATGCCCTTTCTCGTTTGATTCTTGAG < 41bp 1 0.0256420865315904 1 0.0603235065937042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381751 chr20:30381768 stopgain 0.998 1 38 hm5C_associated_SNPs_34623 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr15 89172601 89172601 1 + C T SKCM 89172606 + 89172586 89172626 41 CCCGGCCTCCACACCCGGGCCCGGGTCTCTCTAAAGGACCT CCCGGCCTCCACACCTGGGCCCGGGTCTCTCTAAAGGACCT < 41bp 1 0.4130414019127 1 0.209031820297241 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89172606 chr15:89172601 nonsynonymous SNV 0.045 3 16 hm5C_associated_SNPs_34624 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:89172565-89172601
64251 chr19 36124044 36124044 1 + C T SKCM 36124053 + 36124033 36124073 41 CTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCT CTCACCAGGCCTTCGTGGGCCCCCCTCTGCCTGGGCCCCCT < 41bp 1 0.237371938984562 1 0.0639811158180237 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124053 chr19:36124044 nonsynonymous SNV 0.938 3 12 hm5C_associated_SNPs_34625 0 0 3 FMR1 POSTAR2 ENCODE chr19:36124033-36124075
64251 chr19 36124043 36124043 1 + C T SKCM 36124053 + 36124033 36124073 41 CTCACCAGGCCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCT CTCACCAGGCTCTCGTGGGCCCCCCTCTGCCTGGGCCCCCT < 41bp 1 0.27725357819583 1 0.0431922674179077 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124053 chr19:36124043 synonymous SNV . 0 11 hm5C_associated_SNPs_34626 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:36124042-36124043
64251 chr22 42271656 42271656 1 + A G SKCM 42271638 + 42271618 42271658 41 CAGAATGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCAGG CAGAATGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCGGG < 41bp 1 0.0397421358420783 1 0.0518558025360107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42271638 chr22:42271656 synonymous SNV . 0 39 hm5C_associated_SNPs_34627 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr22:42271620-42271657
64251 chr11 61630757 61630757 1 + C T SKCM 61630766 + 61630746 61630786 41 TCTTGCAGGTTCCTGGAGAGCCACTGGTTTGTGTGGGTCAC TCTTGCAGGTTTCTGGAGAGCCACTGGTTTGTGTGGGTCAC < 41bp 1 0.191249476410564 1 0.202507019042969 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61630766 chr11:61630757 synonymous SNV . 0 12 hm5C_associated_SNPs_34628 0 0 6 PPIG POSTAR2 ENCODE chr11:61630751-61630794
64251 chr17 42225449 42225449 1 + C T SKCM 42225441 + 42225421 42225461 41 TCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGG TCCAGCACGCCCAGTGCTGACAGCCGTCTATCATGCATAGG < 41bp 1 0.488988171173702 1 0.0645920634269714 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225441 chr17:42225449 nonsynonymous SNV 0.002 1 29 hm5C_associated_SNPs_34629 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr17 42225449 42225449 1 + C T SKCM 42225444 + 42225424 42225464 41 AGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGC AGCACGCCCAGTGCTGACAGCCGTCTATCATGCATAGGAGC < 41bp 1 0.0514303816576417 1 0.476225703954697 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225444 chr17:42225449 nonsynonymous SNV 0.002 1 26 hm5C_associated_SNPs_34630 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chrX 154005119 154005119 1 + G A SKCM 154005114 + 154005094 154005134 41 GAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTT GAAGAAGAAGAAGAAGAAAGCAAAAAAGGTAGAATTGGTTT < 41bp 1 0.669814959746981 1 0.485008925199509 experiment 0.660370080506038 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005114 chrX:154005119 nonsynonymous SNV 0.476 1 26 hm5C_associated_SNPs_34631 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chrX 154005119 154005119 1 + G A SKCM 154005135 + 154005115 154005155 41 AAAAGAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTG AAAAAAGGTAGAATTGGTTTCTGAGTAGTGAAGGCCACTTG < 41bp 1 0.630051701848233 1 0.304539144039154 experiment 0.739896596303534 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005135 chrX:154005119 nonsynonymous SNV 0.476 1 5 hm5C_associated_SNPs_34632 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chrX 47102882 47102882 1 + C T SKCM 47102871 + 47102851 47102891 41 TTCCTGTCTACCTGCGGGAGCGCACCCCTGCCCGTGACTAC TTCCTGTCTACCTGCGGGAGCGCACCCCTGCTCGTGACTAC < 41bp 1 0.164117593306378 1 0.188775539398193 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47102871 chrX:47102882 synonymous SNV . 0 32 hm5C_associated_SNPs_34634 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47102844-47102884
64251 chr14 64898334 64898334 1 + C T SKCM 64898346 + 64898326 64898366 41 GGATATTTCATGAACTGACCCAGACAGACAAGGTAGGATGC GGATATTTTATGAACTGACCCAGACAGACAAGGTAGGATGC < 41bp 1 0.251670795599647 1 0.153504639863968 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64898346 chr14:64898334 nonsynonymous SNV 0.972 4 9 hm5C_associated_SNPs_34637 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:64898319-64898342
64251 chr14 64898334 64898334 1 + C T SKCM 64898350 + 64898330 64898370 41 ATTTCATGAACTGACCCAGACAGACAAGGTAGGATGCCAAA ATTTTATGAACTGACCCAGACAGACAAGGTAGGATGCCAAA < 41bp 1 0.277479900781873 1 0.133778691291809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64898350 chr14:64898334 nonsynonymous SNV 0.972 4 5 hm5C_associated_SNPs_34638 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:64898319-64898342
64251 chr9 104307077 104307077 1 + G A SKCM 104307070 + 104307050 104307090 41 TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTT TAATCTGATAGTGGAGGAAGCAGTGCAAGAGCTGAACTCTT < 41bp 1 0.300447377309355 1 0.780908465385437 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307070 chr9:104307077 synonymous SNV . 0 28 hm5C_associated_SNPs_34639 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr1 27089607 27089607 1 + C T SKCM 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTATGGCACACTCCCTTCAGGGAGGATGAGTCACGCCT < 41bp 1 0.718103406493166 1 0.88601541519165 experiment 0.563793187013668 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089607 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_34640 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27089567-27089609
64251 chr9 139734199 139734199 1 + C T SKCM 139734201 + 139734181 139734221 41 GACTGACGAGGATGAGGGCCCTGCCGAGCCGCCCCCACCCC GACTGACGAGGATGAGGGTCCTGCCGAGCCGCCCCCACCCC < 41bp 1 0.465323538154544 1 0.22101104259491 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734201 chr9:139734199 synonymous SNV . 0 19 hm5C_associated_SNPs_34641 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr9:139734181-139734206
64251 chr1 27089606 27089606 1 + T G SKCM 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTATGGCACACTCCCGCCAGGGAGGATGAGTCACGCCT < 41bp 1 0.607998230310716 1 0.881667137145996 experiment 0.784003539378568 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089606 synonymous SNV . 0 19 hm5C_associated_SNPs_34642 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:27089566-27089606
64251 chr17 4859344 4859344 1 + C T SKCM 4859339 + 4859319 4859359 41 GGGGGATGACTTGACAGTCACCAACCCCAAGAGGATTGCCC GGGGGATGACTTGACAGTCACCAACTCCAAGAGGATTGCCC < 41bp 1 0.108399562311797 1 0.0636754930019379 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859339 chr17:4859344 nonsynonymous SNV 0.999 2 26 hm5C_associated_SNPs_34643 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859340 + 4859320 4859360 41 GGGGATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCA GGGGATGACTTGACAGTCACCAACTCCAAGAGGATTGCCCA < 41bp 1 0.363921298048315 1 0.355515003204346 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859340 chr17:4859344 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_34644 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859345 + 4859325 4859365 41 TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCCG TGACTTGACAGTCACCAACTCCAAGAGGATTGCCCAGGCCG < 41bp 1 0.248342374356422 1 0.383737832307816 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859345 chr17:4859344 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_34645 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859357 + 4859337 4859377 41 CACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGG CACCAACTCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGG < 41bp 1 0.278856837668549 1 0.127421826124191 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859357 chr17:4859344 nonsynonymous SNV 0.999 2 8 hm5C_associated_SNPs_34646 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859358 + 4859338 4859378 41 ACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGC ACCAACTCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGC < 41bp 1 0.290866161053863 1 0.424510419368744 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859358 chr17:4859344 nonsynonymous SNV 0.999 2 7 hm5C_associated_SNPs_34647 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859359 + 4859339 4859379 41 CCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCC CCAACTCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCC < 41bp 1 0.428496790213847 1 0.547518908977509 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859359 chr17:4859344 nonsynonymous SNV 0.999 2 6 hm5C_associated_SNPs_34648 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859363 + 4859343 4859383 41 CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA CTCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA < 41bp 1 0.148597725614515 1 0.0885458886623383 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859363 chr17:4859344 nonsynonymous SNV 0.999 2 2 hm5C_associated_SNPs_34649 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859344 4859344 1 + C T SKCM 4859364 + 4859344 4859384 41 CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA TCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA < 41bp 1 0.259996923384463 1 0.311418056488037 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859364 chr17:4859344 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_34650 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr16 72142735 72142735 1 + C T SKCM 72142736 + 72142716 72142756 41 GAACATCCGCACAGGGATGCCCTGCCACTTGCACCCCACCA GAACATCCGCACAGGGATGTCCTGCCACTTGCACCCCACCA < 41bp 1 0.131493358664392 1 0.0772619843482971 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142736 chr16:72142735 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_34651 0 0 1 DDX24 POSTAR2 ENCODE chr16:72142734-72142765
64251 chr9 130434349 130434349 1 + C T SKCM 130434344 + 130434324 130434364 41 TTACAGACCACCATGCGGGACCTGTCCCAGATGCTGAAGAA TTACAGACCACCATGCGGGACCTGTTCCAGATGCTGAAGAA < 41bp 1 0.0436929411984373 1 0.0159619450569153 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130434344 chr9:130434349 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_34652 0 0 3 UCHL5 POSTAR2 ENCODE chr9:130434327-130434393
64251 chr3 49060173 49060173 1 + C T SKCM 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCGAAGACAGCTTTTCTCTCTTCTGGTTGCTGGAGCCC < 41bp 1 0.447314951779066 1 0.353045672178268 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060173 synonymous SNV . 0 20 hm5C_associated_SNPs_34657 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:49060168-49060196
64251 chr1 10479790 10479790 1 + C T SKCM 10479787 + 10479767 10479807 41 CCATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT CCATGGTGGCACCGTGTCATCCTTGTCATACAATGCCTGAT < 41bp 1 0.131496444203156 1 0.0722751915454865 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PGD ENSG00000142657 CDS Human protein_coding chr1:10479787 chr1:10479790 nonsynonymous SNV 0.822 3 24 hm5C_associated_SNPs_34658 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr15 43484963 43484963 1 + A T SKCM 43484957 + 43484937 43484977 41 TTAGTGTGGATGATTTGGCTCTGAGCATATATCCACCTATG TTAGTGTGGATGATTTGGCTCTGAGCTTATATCCACCTATG < 41bp 1 0.645552444859903 1 0.0891839265823364 experiment 0.708895110280194 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43484957 chr15:43484963 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_34659 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:43484961-43484990
64251 chr17 27014416 27014416 1 + C T SKCM 27014434 + 27014414 27014454 41 TGCCCACCCTTACAGCCAGGCCTTGATCCAGTATGTTTGTG TGTCCACCCTTACAGCCAGGCCTTGATCCAGTATGTTTGTG < 41bp 1 0.0246596654849962 1 0.0281786918640137 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014434 chr17:27014416 nonsynonymous SNV 0.989 1 3 hm5C_associated_SNPs_34661 0 0 8 FMR1 POSTAR2 ENCODE chr17:27014378-27014421
64251 chr11 117152336 117152336 1 + C T SKCM 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATTCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT < 41bp 1 0.573493312527068 1 0.640980660915375 experiment 0.853013374945863 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152336 synonymous SNV . 0 6 hm5C_associated_SNPs_34662 0 0 4 ZC3H7B POSTAR2 GSE38201,GSM936510 chr11:117152316-117152339
64251 chr6 168314949 168314949 1 + G A SKCM 168314938 + 168314918 168314958 41 AGCAAGACCGAGACCTTAGTCGGATCACACTGGATGCTCAA AGCAAGACCGAGACCTTAGTCGGATCACACTAGATGCTCAA < 41bp 1 0.35466157734268 1 0.909610748291016 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168314938 chr6:168314949 synonymous SNV . 0 32 hm5C_associated_SNPs_34663 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:168314915-168314956
64251 chr19 48220223 48220223 1 + G A SKCM 48220221 + 48220201 48220241 41 GCAACGCCCTCGTCGTGGACCCGGACAAGCCCTTCCGCAAA GCAACGCCCTCGTCGTGGACCCAGACAAGCCCTTCCGCAAA < 41bp 1 0.414835728983054 1 0.30385947227478 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EHD2 ENSG00000024422 CDS Human protein_coding chr19:48220221 chr19:48220223 synonymous SNV . 0 23 hm5C_associated_SNPs_34664 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:48220201-48220223
64251 chr16 85682309 85682309 1 + C T SKCM 85682293 + 85682273 85682313 41 CCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATCGCTC CCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATTGCTC < 41bp 1 0.136715822426875 1 0.0740616023540497 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85682293 chr16:85682309 synonymous SNV . 0 37 hm5C_associated_SNPs_34665 0 0 3 METAP2 POSTAR2 ENCODE chr16:85682250-85682344
64251 chr6 33652691 33652691 1 + C T SKCM 33652675 + 33652655 33652695 41 AAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCT AAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACTTGCT < 41bp 1 0.180302907361557 1 0.226409912109375 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652675 chr6:33652691 synonymous SNV . 0 37 hm5C_associated_SNPs_34666 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr6:33652671-33652693
64251 chr11 107917082 107917082 1 + A G SKCM 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGTTTATTGAGCAAGCACAGGCAGTAAGTTCTACATGC < 41bp 1 0.484865433409705 1 0.469757556915283 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917082 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_34669 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr6 64394364 64394364 1 + T C SKCM 64394368 + 64394348 64394388 41 ATCCGGGAGAAATAGATGTGCCATCTCATGAATTAAATTGT ATCCGGGAGAAATAGACGTGCCATCTCATGAATTAAATTGT < 41bp 1 0.0126034806049833 1 0.0762951076030731 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64394368 chr6:64394364 synonymous SNV . 0 17 hm5C_associated_SNPs_34670 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64394088-64394691
64251 chr12 104327797 104327797 1 + T C SKCM 104327808 + 104327788 104327828 41 AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATC AGAGAAGAGCTGGTTAAAAACCTTGGTACCATAGCCAAATC < 41bp 1 0.260850353367572 1 0.095516562461853 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327808 chr12:104327797 synonymous SNV . 0 10 hm5C_associated_SNPs_34672 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:104327731-104327851
64251 chr22 35783086 35783086 1 + C T SKCM 35783079 + 35783059 35783099 41 ACCAAGTTCAAGCAGCTCTACCGCTCCCGCATGAACTCCCT ACCAAGTTCAAGCAGCTCTACCGCTCCTGCATGAACTCCCT < 41bp 1 0.155792510434981 1 0.0594518780708313 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783079 chr22:35783086 nonsynonymous SNV 0.998 4 28 hm5C_associated_SNPs_34674 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr8 145065437 145065437 1 + C T SKCM 145065439 + 145065419 145065459 41 TCTGGGGACAACTATCCTCCCCCCAACCCTGGATATCCGGG TCTGGGGACAACTATCCTTCCCCCAACCCTGGATATCCGGG < 41bp 1 0.383776747428689 1 0.446441680192947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065439 chr8:145065437 nonsynonymous SNV 0.891 1 19 hm5C_associated_SNPs_34675 0 0 22 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:145065403-145065439
64251 chr7 30661043 30661043 1 + C T SKCM 30661058 + 30661038 30661078 41 TCGTTCCTGTTATGACCTCTCCTGTCATGCACGAGCCACCA TCGTTTCTGTTATGACCTCTCCTGTCATGCACGAGCCACCA < 41bp 1 0.251944276727795 1 0.200531721115112 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30661058 chr7:30661043 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_34676 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:30661003-30661055
64251 chr12 95879672 95879672 1 + C T SKCM 95879655 + 95879635 95879675 41 GCTTTATTTGTATCTCACAGCAAAAGTTCAAACAGACCCTC GCTTTATTTGTATCTCACAGCAAAAGTTCAAACAGACTCTC < 41bp 1 0.555061693571141 1 0.335017472505569 experiment 0.889876612857717 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95879655 chr12:95879672 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_34681 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:95879660-95879680
64251 chr2 47221612 47221612 1 + C T SKCM 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC CATGGGCAAGGAGGAGAGTTCTTTCGCTACTCAGGCCCTGC < 41bp 1 0.0737174638838629 1 0.023982971906662 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221612 synonymous SNV . 0 28 hm5C_associated_SNPs_34682 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chr9 33366686 33366686 1 + C T SKCM 33366677 + 33366657 33366697 41 CCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTT CCTCCCATGAACAGAGACCACCGCCGGATTATCCATGACTT < 41bp 1 0.222711159883963 1 0.1274553835392 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33366677 chr9:33366686 synonymous SNV . 0 30 hm5C_associated_SNPs_34684 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33366662-33366686
64251 chr3 32932809 32932809 1 + G A SKCM 32932816 + 32932796 32932836 41 CAACTACCCTTGGGATGTGGCGGTGAATTCTGAGGGCAAGA CAACTACCCTTGGAATGTGGCGGTGAATTCTGAGGGCAAGA < 41bp 1 0.226661062561087 1 0.446304202079773 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932816 chr3:32932809 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_34685 0 0 2 GRSF1 POSTAR2 ENCODE chr3:32932783-32932839
64251 chr19 36227621 36227621 1 + C T SKCM 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG CGAGCTCTGAGGAAGAGCCTCTATCCCCAGATGATAAAGAG < 41bp 1 0.0217149691141747 1 0.11944454908371 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227621 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_34687 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36227590-36227626
64251 chr7 55259447 55259447 1 + C T SKCM 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCATCGCGA < 41bp 1 0.0616313475198578 1 0.245875597000122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259447 synonymous SNV . 0 36 hm5C_associated_SNPs_34688 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chrX 70344182 70344182 1 + C T SKCM 70344193 + 70344173 70344213 41 TTTGATGATCCTGCCGATGACCCAGAGCACAAGGAGGCTGA TTTGATGATTCTGCCGATGACCCAGAGCACAAGGAGGCTGA < 41bp 1 0.354892331342569 1 0.181271106004715 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70344193 chrX:70344182 nonsynonymous SNV 0.984 1 10 hm5C_associated_SNPs_34689 0 0 3 DDX24 POSTAR2 ENCODE chrX:70344176-70344218
64251 chr1 116932243 116932243 1 + C T SKCM 116932239 + 116932219 116932259 41 TCTTTCTTCATCCTTTCTCTCATCCTTGAGTACACCTGGCT TCTTTCTTCATCCTTTCTCTCATCTTTGAGTACACCTGGCT < 41bp 1 0.179481971875092 1 0.167437642812729 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116932239 chr1:116932243 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_34690 0 0 20 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:116932166-116932280
64251 chr4 6642901 6642901 1 + C T SKCM 6642888 + 6642868 6642908 41 GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGA GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCTAAGGAGA < 41bp 1 0.725098746755923 1 0.74713408946991 experiment 0.549802506488154 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642888 chr4:6642901 synonymous SNV . 0 34 hm5C_associated_SNPs_34691 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:6642874-6642909
64251 chr9 134067664 134067664 1 + C T SKCM 134067670 + 134067650 134067690 41 CAGCAAGCCTTTCTCATTTTCTCCATCAGGGTCAGTAATGA CAGCAAGCCTTTCTTATTTTCTCCATCAGGGTCAGTAATGA < 41bp 1 0.503273395813748 1 0.972947716712952 experiment 0.993453208372504 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134067670 chr9:134067664 nonsynonymous SNV 0.998 3 15 hm5C_associated_SNPs_34692 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:134067636-134067684
64251 chr16 24582700 24582700 1 + G A SKCM 24582720 + 24582700 24582740 41 GAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAGGCTAGA AAAATTTTAAAAGTCTGTCTCAATCTTCCAAAGAGGCTAGA < 41bp 1 0.0784702358771034 1 0.40418341755867 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24582720 chr16:24582700 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_34693 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:24582668-24582702
64251 chr14 71428979 71428979 1 + C T SKCM 71428988 + 71428968 71429008 41 TCTGAGTTCATCCGAGAGGCCACACCCCCAGTTGGTTGCAG TCTGAGTTCATTCGAGAGGCCACACCCCCAGTTGGTTGCAG < 41bp 1 0.118208117463004 1 0.0642398595809937 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71428988 chr14:71428979 synonymous SNV . 0 12 hm5C_associated_SNPs_34694 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:71428960-71428980
64251 chr15 64791938 64791938 1 + C T SKCM 64791947 + 64791927 64791967 41 TCCAGGGACTTCCCTGTTCACTCCAAGTGAGGGGGCAGCTA TCCAGGGACTTTCCTGTTCACTCCAAGTGAGGGGGCAGCTA < 41bp 1 0.79185223521487 1 0.890278577804565 experiment 0.41629552957026 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64791947 chr15:64791938 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_34695 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr15:64791929-64791949
64251 chr1 118499763 118499763 1 + C T SKCM 118499775 + 118499755 118499795 41 AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG AACGAATTTATTCAGCTGGGCTCTGATGTTGAACTTATATG < 41bp 1 0.162184479697132 1 0.077113151550293 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118499775 chr1:118499763 synonymous SNV . 0 9 hm5C_associated_SNPs_34696 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr1:118499718-118499779
64251 chr15 93482839 93482839 1 + C T SKCM 93482840 + 93482820 93482860 41 ACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGA ACCTCGTGTTAAAAAGCAGTCGAAGACTCAGCGTGGAAAGA < 41bp 1 0.190750869362509 1 0.414956122636795 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482840 chr15:93482839 nonsynonymous SNV 0.986 0 20 hm5C_associated_SNPs_34697 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482839 93482839 1 + C T SKCM 93482846 + 93482826 93482866 41 TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAA TGTTAAAAAGCAGTCGAAGACTCAGCGTGGAAAGAGAAAAA < 41bp 1 0.323127965694104 1 0.511764824390411 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482846 chr15:93482839 nonsynonymous SNV 0.986 0 14 hm5C_associated_SNPs_34698 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482839 93482839 1 + C T SKCM 93482848 + 93482828 93482868 41 TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAAAG TTAAAAAGCAGTCGAAGACTCAGCGTGGAAAGAGAAAAAAG < 41bp 1 0.478522838030166 1 0.736753821372986 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482848 chr15:93482839 nonsynonymous SNV 0.986 0 12 hm5C_associated_SNPs_34699 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr12 989990 989990 1 + C T SKCM 989989 + 989969 990009 41 ATTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG ATTCTACAGTCCTATCCCCTCTCATGCCGACAGAAGTACTG < 41bp 1 0.293362614097842 1 0.202258735895157 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:989989 chr12:989990 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_34701 0 0 6 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr12:989969-989990
64251 chr7 73944176 73944176 1 + C T SKCM 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCTTGCACTT < 41bp 1 0.022442932495948 1 0.119347810745239 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944176 synonymous SNV . 0 34 hm5C_associated_SNPs_34702 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr22 23523650 23523650 1 + C T SKCM 23523630 + 23523610 23523650 41 AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCC AGGTCCAACTTCGAGCGGATCCGCAAGGGCCATGGCCAGCT < 41bp 1 0.511321401146919 1 0.031111091375351 experiment 0.977357197706163 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23523630 chr22:23523650 nonsynonymous SNV 0.156 0 41 hm5C_associated_SNPs_34703 0 0 10 DDX24 POSTAR2 ENCODE chr22:23523634-23523709
64251 chr7 73944175 73944175 1 + C T SKCM 73944163 + 73944143 73944183 41 GGGCATCCCGGACAAGATCCCCTTCAAGCGCCCCTGCACTT GGGCATCCCGGACAAGATCCCCTTCAAGCGCCTCTGCACTT < 41bp 1 0.023705890297377 1 0.0824869573116302 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944163 chr7:73944175 nonsynonymous SNV 0.985 4 33 hm5C_associated_SNPs_34704 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73944091-73944219
64251 chr10 102748840 102748840 1 + C T SKCM 102748820 + 102748800 102748840 41 TGCCTACCCTTACTCTACCCCGAGGAACGACCTGCTTACCC TGCCTACCCTTACTCTACCCCGAGGAACGACCTGCTTACCT < 41bp 1 0.643890929645714 1 0.846455097198486 experiment 0.712218140708572 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TWNK ENSG00000107815 CDS Human protein_coding chr10:102748820 chr10:102748840 synonymous SNV . 0 41 hm5C_associated_SNPs_34705 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102748801-102748860
64251 chr4 6642900 6642900 1 + C T SKCM 6642888 + 6642868 6642908 41 GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGCCAAGGAGA GGCCAAGAGGTGCGAGAAGGCCGAGGAGAAGGTCAAGGAGA < 41bp 1 0.741578249040608 1 0.681453049182892 experiment 0.516843501918785 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642888 chr4:6642900 nonsynonymous SNV 0.965 2 33 hm5C_associated_SNPs_34706 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:6642874-6642909
64251 chr15 93482840 93482840 1 + C T SKCM 93482839 + 93482819 93482859 41 AACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAG AACCTCGTGTTAAAAAGCAGCTGAAGACTCAGCGTGGAAAG < 41bp 1 0.42325246322339 1 0.0860512852668762 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482839 chr15:93482840 nonsynonymous SNV 0.987 0 22 hm5C_associated_SNPs_34707 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482840 93482840 1 + C T SKCM 93482846 + 93482826 93482866 41 TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAA TGTTAAAAAGCAGCTGAAGACTCAGCGTGGAAAGAGAAAAA < 41bp 1 0.319777250098293 1 0.615351855754852 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482846 chr15:93482840 nonsynonymous SNV 0.987 0 15 hm5C_associated_SNPs_34708 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482840 93482840 1 + C T SKCM 93482848 + 93482828 93482868 41 TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAAAG TTAAAAAGCAGCTGAAGACTCAGCGTGGAAAGAGAAAAAAG < 41bp 1 0.532461166890651 1 0.758452653884888 experiment 0.935077666218697 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482848 chr15:93482840 nonsynonymous SNV 0.987 0 13 hm5C_associated_SNPs_34709 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr7 56136241 56136241 1 + C T SKCM 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CTAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC < 41bp 1 0.59414024562175 1 0.685908079147339 experiment 0.8117195087565 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136241 nonsynonymous SNV 0.999 2 2 hm5C_associated_SNPs_34710 0 0 4 DROSHA POSTAR2 ENCODE chr7:56136172-56136260
64251 chr11 121495971 121495971 1 + G A SKCM 121495977 + 121495957 121495997 41 CCATCCTGCTGTACGATGAGCTGGGGTCTGGTGAGTTGCGA CCATCCTGCTGTACAATGAGCTGGGGTCTGGTGAGTTGCGA < 41bp 1 0.472276264801215 1 0.4044229388237 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SORL1 ENSG00000137642 CDS Human protein_coding chr11:121495977 chr11:121495971 nonsynonymous SNV 0.784 2 15 hm5C_associated_SNPs_34711 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:121495887-121495993
64251 chr15 96877562 96877562 1 + C T SKCM 96877544 + 96877524 96877564 41 TCAGCGCCGTCGAGTGGGCCCGGAACATCCCCTTCTTCCCC TCAGCGCCGTCGAGTGGGCCCGGAACATCCCCTTCTTCTCC < 41bp 1 0.781544653334291 1 0.441362798213959 experiment 0.436910693331418 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877544 chr15:96877562 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_34712 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:96877524-96877562
64251 chr2 27302058 27302058 1 + G A SKCM 27302048 + 27302028 27302068 41 ACACAGGTTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAG ACACAGGTTCCAGTGGGGCCCTCAGCCCCGAGGGGCCCCAG < 41bp 1 0.568368717213443 1 0.300880551338196 experiment 0.863262565573114 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302048 chr2:27302058 nonsynonymous SNV 0.112 1 31 hm5C_associated_SNPs_34715 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302058 27302058 1 + G A SKCM 27302063 + 27302043 27302083 41 GGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCC GGGCCCTCAGCCCCGAGGGGCCCCAGGCCCAGATTGCCCCC < 41bp 1 0.346508405660666 1 0.114199042320251 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302063 chr2:27302058 nonsynonymous SNV 0.112 1 16 hm5C_associated_SNPs_34716 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302058 27302058 1 + G A SKCM 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGCCCTCAGCCCCGAGGGGCCCCAGGCCCAGATTGCCCCCC < 41bp 1 0.316628127615121 1 0.368856489658356 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302058 nonsynonymous SNV 0.112 1 15 hm5C_associated_SNPs_34717 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302058 27302058 1 + G A SKCM 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GCCCTCAGCCCCGAGGGGCCCCAGGCCCAGATTGCCCCCCG < 41bp 1 0.572841494144388 1 0.481573522090912 experiment 0.854317011711224 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302058 nonsynonymous SNV 0.112 1 14 hm5C_associated_SNPs_34718 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 27302058 27302058 1 + G A SKCM 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG CCCTCAGCCCCGAGGGGCCCCAGGCCCAGATTGCCCCCCGG < 41bp 1 0.55049569225835 1 0.737744212150574 experiment 0.899008615483299 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302058 nonsynonymous SNV 0.112 1 13 hm5C_associated_SNPs_34719 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr12 94562988 94562988 1 + C T SKCM 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCTGACCTGACATCCGTTTATGGCACCGTGGTAAT < 41bp 1 0.0644996685901793 1 0.0567764937877655 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94562988 synonymous SNV . 0 9 hm5C_associated_SNPs_34720 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:94562970-94562992
64251 chr7 794309 794309 1 + G A SKCM 794297 + 794277 794317 41 AGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTG AGATCCTCCCTGCCCTGTGCCACGACATCACCAACTGGGTG < 41bp 1 0.706947416206986 1 0.141337722539902 experiment 0.586105167586028 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:794297 chr7:794309 nonsynonymous SNV 0.891 3 33 hm5C_associated_SNPs_34727 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:794300-794320
64251 chr2 74757402 74757402 1 + C T SKCM 74757418 + 74757398 74757438 41 GATACCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCCG GATATCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCCG < 41bp 1 0.710617030719716 1 0.887966275215149 experiment 0.578765938560568 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757418 chr2:74757402 nonsynonymous SNV 0.001 0 5 hm5C_associated_SNPs_34728 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:74757398-74757422
64251 chr17 4720032 4720032 1 + C T SKCM 4720020 + 4720000 4720040 41 TTATCACCAAGGACTGGGTGCAGCTGGACCGGCCTTTCGAA TTATCACCAAGGACTGGGTGCAGCTGGACCGGTCTTTCGAA < 41bp 1 0.326681295067275 1 0.162841022014618 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD2 ENSG00000129219 CDS Human protein_coding chr17:4720020 chr17:4720032 nonsynonymous SNV 0.996 3 33 hm5C_associated_SNPs_34729 0 0 1 PPIG POSTAR2 ENCODE chr17:4720009-4720039
64251 chr21 30422476 30422476 1 + C T SKCM 30422456 + 30422436 30422476 41 TAACAAACACATAAAGTTTCCGGAAATCTTAGATTTGGCTC TAACAAACACATAAAGTTTCCGGAAATCTTAGATTTGGCTT < 41bp 1 0.753529905440174 1 0.499604523181915 experiment 0.492940189119653 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30422456 chr21:30422476 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_34730 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:30422438-30422491
64251 chr22 22040815 22040815 1 + C T SKCM 22040825 + 22040805 22040845 41 TTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGC TTCACCTCCATCGCGATGGTCCCGGAGACCACACATGAAGC < 41bp 1 0.312941159881881 1 0.389163821935654 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22040825 chr22:22040815 nonsynonymous SNV 0.220 4 11 hm5C_associated_SNPs_34749 0 0 4 DDX24 POSTAR2 ENCODE chr22:22040796-22040849
64251 chrX 73046784 73046784 1 - C T SKCM 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCAAAGGCCTGAGTTGGATGGAAGTCTC < 41bp 1 0.328257502132451 1 0.507725298404694 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046784 . . 0 16 hm5C_associated_SNPs_34750 0 0 69 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046784 73046784 1 - C T SKCM 73046786 - 73046766 73046806 41 AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGG AGAGGGTGGCCTGAATTGGACCAAAGGCCTGAGTTGGATGG < 41bp 1 0.229765423236617 1 0.183760225772858 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046786 chrX:73046784 . . 0 23 hm5C_associated_SNPs_34751 0 0 69 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046784 73046784 1 - C T SKCM 73046797 - 73046777 73046817 41 GCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCT GCCAAGAAAACAGAGGGTGGCCTGAATTGGACCAAAGGCCT < 41bp 1 0.261639375978802 1 0.168487876653671 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046797 chrX:73046784 . . 0 34 hm5C_associated_SNPs_34752 0 0 69 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr17 60768369 60768369 1 + G A SKCM 60768363 + 60768343 60768383 41 TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGC TGAACTACTCCAACTGGGGGCCCCCGAGCTTGGGCCCCAGC < 41bp 1 0.0300099783776934 1 0.0892072021961212 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768363 chr17:60768369 nonsynonymous SNV 0.710 2 27 hm5C_associated_SNPs_34755 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768364 + 60768344 60768384 41 GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCA GAACTACTCCAACTGGGGGCCCCCGAGCTTGGGCCCCAGCA < 41bp 1 0.0907806278258592 1 0.447910696268082 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768364 chr17:60768369 nonsynonymous SNV 0.710 2 26 hm5C_associated_SNPs_34756 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768365 + 60768345 60768385 41 AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCAT AACTACTCCAACTGGGGGCCCCCGAGCTTGGGCCCCAGCAT < 41bp 1 0.362931082720499 1 0.681836485862732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768365 chr17:60768369 nonsynonymous SNV 0.710 2 25 hm5C_associated_SNPs_34757 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768377 + 60768357 60768397 41 TGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA TGGGGGCCCCCGAGCTTGGGCCCCAGCATGCTGAGCCACAA < 41bp 1 0.323000308832228 1 0.127879410982132 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768377 chr17:60768369 nonsynonymous SNV 0.710 2 13 hm5C_associated_SNPs_34758 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768378 + 60768358 60768398 41 GGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC GGGGGCCCCCGAGCTTGGGCCCCAGCATGCTGAGCCACAAC < 41bp 1 0.0949505886970541 1 0.225799798965454 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768378 chr17:60768369 nonsynonymous SNV 0.710 2 12 hm5C_associated_SNPs_34759 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768379 + 60768359 60768399 41 GGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA GGGGCCCCCGAGCTTGGGCCCCAGCATGCTGAGCCACAACA < 41bp 1 0.0734559107925894 1 0.243198812007904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768379 chr17:60768369 nonsynonymous SNV 0.710 2 11 hm5C_associated_SNPs_34760 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768369 60768369 1 + G A SKCM 60768380 + 60768360 60768400 41 GGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG GGGCCCCCGAGCTTGGGCCCCAGCATGCTGAGCCACAACAG < 41bp 1 0.578622424381466 1 0.461019158363342 experiment 0.842755151237067 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768380 chr17:60768369 nonsynonymous SNV 0.710 2 10 hm5C_associated_SNPs_34761 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr8 61757427 61757427 1 + G A SKCM 61757430 + 61757410 61757450 41 ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCC ATTTGCTTTGCAGTTGGAGACGGTGGACAGACATTCTTTCC < 41bp 1 0.258037527934663 1 0.785477638244629 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757430 chr8:61757427 nonsynonymous SNV 0.992 4 18 hm5C_associated_SNPs_34762 0 0 3 PPIG POSTAR2 ENCODE chr8:61757421-61757455
64251 chr8 61757428 61757428 1 + G A SKCM 61757430 + 61757410 61757450 41 ATTTGCTTTGCAGTTGGGGACGGTGGACAGACATTCTTTCC ATTTGCTTTGCAGTTGGGAACGGTGGACAGACATTCTTTCC < 41bp 1 0.219752587329356 1 0.52889484167099 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD7 ENSG00000171316 CDS Human protein_coding chr8:61757430 chr8:61757428 nonsynonymous SNV 0.991 4 19 hm5C_associated_SNPs_34763 0 0 3 PPIG POSTAR2 ENCODE chr8:61757421-61757455
64251 chr10 76468125 76468125 1 + C T SKCM 76468126 + 76468106 76468146 41 AGCCTCTGACTGAATGTATCCGTGCTGGCCACTATGCAGCA AGCCTCTGACTGAATGTATTCGTGCTGGCCACTATGCAGCA < 41bp 1 0.462971443612438 1 0.780782341957092 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADK ENSG00000156110 CDS Human protein_coding chr10:76468126 chr10:76468125 synonymous SNV . 0 20 hm5C_associated_SNPs_34765 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr10:76468091-76468127
64251 chr12 112130549 112130549 1 + C T SKCM 112130547 + 112130527 112130567 41 GCTGTTTCCAGTCCCCCCGTCTCCAGTGGGTGTGGAGAACA GCTGTTTCCAGTCCCCCCGTCTTCAGTGGGTGTGGAGAACA < 41bp 1 0.48271410944514 1 0.73139625787735 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACAD10 ENSG00000111271 CDS Human protein_coding chr12:112130547 chr12:112130549 synonymous SNV . 0 23 hm5C_associated_SNPs_34766 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:112130548-112130549
64251 chrX 70357586 70357586 1 + C T SKCM 70357578 + 70357558 70357598 41 TCTCCTTCTTCCCTCCAGGGCTATACTCCTTATGTTTCTCA TCTCCTTCTTCCCTCCAGGGCTATACTCTTTATGTTTCTCA < 41bp 1 0.0950973270215684 1 0.0875484049320221 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70357578 chrX:70357586 nonsynonymous SNV 0.998 1 29 hm5C_associated_SNPs_34767 0 0 1 EFTUD2 POSTAR2 ENCODE chrX:70357531-70357628
64251 chr2 99999343 99999343 1 + C T SKCM 99999336 + 99999316 99999356 41 CCCCAGACAATTGAGTCTATCAACCTTCTCAAATCTAAAAA CCCCAGACAATTGAGTCTATCAACCTTTTCAAATCTAAAAA < 41bp 1 0.392142249367465 1 0.354019433259964 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99999336 chr2:99999343 nonsynonymous SNV 0.991 3 28 hm5C_associated_SNPs_34768 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99999304-99999362
64251 chr2 128178923 128178923 1 + C T SKCM 128178922 + 128178902 128178942 41 GATCCGCAAACGTGCCAACTCCTTCCTGGAGGAGCTCCGTC GATCCGCAAACGTGCCAACTCTTTCCTGGAGGAGCTCCGTC < 41bp 1 0.152596575151326 1 0.0550442934036255 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PROC ENSG00000115718 CDS Human protein_coding chr2:128178922 chr2:128178923 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_34769 0 0 2 RPS3 POSTAR2 ENCODE chr2:128178911-128178964
64251 chr16 24826599 24826599 1 + G A SKCM 24826598 + 24826578 24826618 41 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG CCACGTGCCAAATCGCCTAACAGCTCTAGCAGTGTTAATTG < 41bp 1 0.375821102326917 1 0.0647346675395966 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24826598 chr16:24826599 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_34770 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:24826584-24826609
64251 chrX 73046551 73046551 1 - C T SKCM 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA GAAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA < 41bp 1 0.263026046925757 1 0.462346166372299 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046551 . . 0 2 hm5C_associated_SNPs_34772 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046551 73046551 1 - C T SKCM 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CGAAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG < 41bp 1 0.246743071701775 1 0.279744148254395 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046551 . . 0 3 hm5C_associated_SNPs_34773 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046551 73046551 1 - C T SKCM 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCGAAATCTGGAGGCCCATGACCCAGAACCCAGGAA < 41bp 1 0.0544740444783091 1 0.133994191884995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046551 . . 0 9 hm5C_associated_SNPs_34774 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chrX 73046551 73046551 1 - C T SKCM 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGAAAT < 41bp 1 0.701149089577042 1 0.615095853805542 experiment 0.597701820845917 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046551 . . 0 38 hm5C_associated_SNPs_34775 0 0 83 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046540-73046560
64251 chr16 24826600 24826600 1 + G A SKCM 24826598 + 24826578 24826618 41 CCACGTGCCAAATCGCCTAACGGCTCTAGCAGTGTTAATTG CCACGTGCCAAATCGCCTAACGACTCTAGCAGTGTTAATTG < 41bp 1 0.298289880258733 1 0.0376015901565552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24826598 chr16:24826600 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_34776 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:24826584-24826609
64251 chr15 78841258 78841258 1 + A G SKCM 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGGAAAAGAA < 41bp 1 0.708242991462932 1 0.476269096136093 experiment 0.583514017074136 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841258 nonsynonymous SNV 0.996 2 34 hm5C_associated_SNPs_34777 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chrX 153628212 153628212 1 + A T SKCM 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATTTCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT < 41bp 1 0.352011339202007 1 0.0415612757205963 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628212 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_34778 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr1 223943208 223943208 1 + C T SKCM 223943200 + 223943180 223943220 41 AGACACATTCTGGATGAACCCTCAGTACCTGATCAAGCTGG AGACACATTCTGGATGAACCCTCAGTACTTGATCAAGCTGG < 41bp 1 0.653918070857085 1 0.367838799953461 experiment 0.692163858285831 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943200 chr1:223943208 synonymous SNV . 0 29 hm5C_associated_SNPs_34779 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chr1 223943208 223943208 1 + C T SKCM 223943207 + 223943187 223943227 41 TTCTGGATGAACCCTCAGTACCTGATCAAGCTGGAGGAGGA TTCTGGATGAACCCTCAGTACTTGATCAAGCTGGAGGAGGA < 41bp 1 0.671885437563073 1 0.204691469669342 experiment 0.656229124873854 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943207 chr1:223943208 synonymous SNV . 0 22 hm5C_associated_SNPs_34780 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chrX 153628213 153628213 1 + T C SKCM 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATACCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT < 41bp 1 0.347244782905972 1 0.0330245792865753 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628213 nonsynonymous SNV 0.998 1 5 hm5C_associated_SNPs_34781 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr7 6631409 6631409 1 + A T SKCM 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGCCCTCAAGGGAACAAAGCCGATGACTGCCGGATGAGCT < 41bp 1 0.14377979894489 1 0.278095632791519 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631409 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_34782 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:6631409-6631410
64251 chr7 6631409 6631409 1 + A T SKCM 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGCCCTCAAGGGAACAAAGCCGATGACTGCCGGATGAGCTT < 41bp 1 0.425456823992094 1 0.476600766181946 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631409 nonsynonymous SNV 0.999 2 28 hm5C_associated_SNPs_34783 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:6631409-6631410
64251 chr7 36466575 36466575 1 + C T SKCM 36466562 + 36466542 36466582 41 GGTCTTAGTGCTGTGCGAACCAGCAACTTCGCCCTTGTTGG GGTCTTAGTGCTGTGCGAACCAGCAACTTCGCCTTTGTTGG < 41bp 1 0.793210241114661 1 0.847251892089844 experiment 0.413579517770678 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36466562 chr7:36466575 nonsynonymous SNV 0.919 4 34 hm5C_associated_SNPs_34784 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36466558-36466581
64251 chr19 44515263 44515263 1 + C T SKCM 44515278 + 44515258 44515298 41 GAATCCACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT GAATCTACAGTGGAGAAAAACCATACAGATGTGAGGAGTGT < 41bp 1 0.275670932849623 1 0.0909391939640045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515278 chr19:44515263 nonsynonymous SNV 0.013 3 6 hm5C_associated_SNPs_34785 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515256-44515280
64251 chr7 135328088 135328088 1 + C T SKCM 135328068 + 135328048 135328088 41 GACAGAGTGTCAGCAAGCTACAAAATGTAGAGCAGCTTCCC GACAGAGTGTCAGCAAGCTACAAAATGTAGAGCAGCTTCCT < 41bp 1 0.408863788503207 1 0.180196106433868 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135328068 chr7:135328088 synonymous SNV . 0 41 hm5C_associated_SNPs_34786 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:135328012-135328103
64251 chr13 76382250 76382250 1 + C T SKCM 76382234 + 76382214 76382254 41 GGAACTACCGTGCCTCCCATCAGTTTCACCCCTGGCCCCTG GGAACTACCGTGCCTCCCATCAGTTTCACCCCTGGCTCCTG < 41bp 1 0.227123357340215 1 0.714375019073486 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76382234 chr13:76382250 nonsynonymous SNV 0.995 1 37 hm5C_associated_SNPs_34787 0 0 1 SRSF9 POSTAR2 ENCODE chr13:76382237-76382355
64251 chr2 74328497 74328497 1 + C T SKCM 74328499 + 74328479 74328519 41 ACCTCGGCCTTGGCTGGGCCCAGCCTGACTGAGAAGCCGTG ACCTCGGCCTTGGCTGGGTCCAGCCTGACTGAGAAGCCGTG < 41bp 1 0.209900485938981 1 0.0550350546836853 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328499 chr2:74328497 nonsynonymous SNV 0.552 0 19 hm5C_associated_SNPs_34788 0 0 1 EIF3H POSTAR2 ENCODE chr2:74328487-74328534
64251 chr17 78318516 78318516 1 + C T SKCM 78318498 + 78318478 78318518 41 CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTTCC < 41bp 1 0.0497480905100623 1 0.0303457081317902 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78318498 chr17:78318516 synonymous SNV . 0 39 hm5C_associated_SNPs_34791 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr17:78318508-78318532
64251 chr5 139893013 139893013 1 + A T SKCM 139893005 + 139892985 139893025 41 TTGTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG TTGTGAAGGCTAAAGACCAGCAAGCTGCTGAAGCAAATAAG < 41bp 1 0.161588358505172 1 0.288991421461105 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139893005 chr5:139893013 synonymous SNV . 0 29 hm5C_associated_SNPs_34792 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:139892992-139893013
64251 chr5 139494086 139494086 1 + C T SKCM 139494074 + 139494054 139494094 41 CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGT CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGTCGTGGAGT < 41bp 1 0.210573475856895 1 0.256095588207245 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PURA ENSG00000185129 CDS Human protein_coding chr5:139494074 chr5:139494086 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_34793 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139494080-139494100
64251 chr22 29622514 29622514 1 + G A SKCM 29622517 + 29622497 29622537 41 AAGTGTCAGAGCTGACAGAGCGGCTGAAGGTGCTGGAGGCC AAGTGTCAGAGCTGACAAAGCGGCTGAAGGTGCTGGAGGCC < 41bp 1 0.554394335556629 1 0.732047915458679 experiment 0.891211328886742 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EMID1 ENSG00000186998 CDS Human protein_coding chr22:29622517 chr22:29622514 nonsynonymous SNV 0.902 0 18 hm5C_associated_SNPs_34806 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr22:29622500-29622520
64251 chr2 99156085 99156085 1 + C T SKCM 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTCTCTCTGCACGTGCCCCGGCAGT < 41bp 1 0.618477624274711 1 0.802982211112976 experiment 0.763044751450578 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156085 synonymous SNV . 0 22 hm5C_associated_SNPs_34807 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr21 37785199 37785199 1 + T G SKCM 37785214 + 37785194 37785234 41 TGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCAT TGCCTGCCTGGCCATTTCTTCCACGGACGGTTACTGCTCAT < 41bp 1 0.372295582716416 1 0.247886419296265 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785214 chr21:37785199 nonsynonymous SNV 0.988 4 6 hm5C_associated_SNPs_34817 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr21:37785195-37785218
64251 chr3 150264610 150264610 1 + C T SKCM 150264597 + 150264577 150264617 41 TTTCCGGGACAACATGGCGCCGTCCACGCCGCTCTTGACAG TTTCCGGGACAACATGGCGCCGTCCACGCCGCTTTTGACAG < 41bp 1 0.19489291985375 1 0.118578523397446 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150264597 chr3:150264610 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_34818 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:150264589-150264613
64251 chr15 41191790 41191790 1 + C T SKCM 41191805 + 41191785 41191825 41 CCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTT CCATTTCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTT < 41bp 1 0.218598948176709 1 0.0647494792938232 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191805 chr15:41191790 synonymous SNV . 0 6 hm5C_associated_SNPs_34820 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:41191744-41191791
64251 chr6 29910549 29910549 1 + G A SKCM 29910541 + 29910521 29910561 41 TGCTCGCCCCCAGGCTCCCACTCCATGAGGTATTTCTTCAC TGCTCGCCCCCAGGCTCCCACTCCATGAAGTATTTCTTCAC < 41bp 1 0.642095890026644 1 0.983573198318481 experiment 0.715808219946712 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HLA-A ENSG00000206503 CDS Human protein_coding chr6:29910541 chr6:29910549 nonsynonymous SNV 0.037 1 29 hm5C_associated_SNPs_34821 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:29910540-29910560
64251 chr4 3319336 3319336 1 + C T SKCM 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGTCCGGACCTCGAAGGGAGCCCCCCATTTGAGGCCGCTCA < 41bp 1 0.0990447153847529 1 0.22150793671608 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319336 nonsynonymous SNV 0.007 0 11 hm5C_associated_SNPs_34822 0 0 2 BUD13 POSTAR2 ENCODE chr4:3319285-3319338
64251 chr8 145697783 145697783 1 + G A SKCM 145697780 + 145697760 145697800 41 GGGCCTCCCGAGCGCCTGGCCGTGAGGCAGGGCCCAGAAGG GGGCCTCCCGAGCGCCTGGCCGTAAGGCAGGGCCCAGAAGG < 41bp 1 0.488357998274231 1 0.389114856719971 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIFC2 ENSG00000167702 CDS Human protein_coding chr8:145697780 chr8:145697783 synonymous SNV . 0 24 hm5C_associated_SNPs_34823 0 0 3 LSM11 POSTAR2 ENCODE chr8:145697742-145697786
64251 chr11 63706495 63706495 1 + G A SKCM 63706484 + 63706464 63706504 41 TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTGTTGCAGCCA TTGCAGGGCCGTCCGCTCTGCTGCCGCCGCTATTGCAGCCA < 41bp 1 0.510773763827399 1 0.449630916118622 experiment 0.978452472345202 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA40 ENSG00000110583 UTR5 Human protein_coding chr11:63706484 chr11:63706495 . . 0 32 hm5C_associated_SNPs_34825 0 0 4 DDX3X POSTAR2 ENCODE chr11:63706477-63706575
64251 chrX 47065744 47065744 1 + C T SKCM 47065738 + 47065718 47065758 41 GGCAATGTGCAGGTGGTGATCCCCTTCCTGACAGAGTCGTA GGCAATGTGCAGGTGGTGATCCCCTTTCTGACAGAGTCGTA < 41bp 1 0.365479976179978 1 0.0545131862163544 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47065738 chrX:47065744 synonymous SNV . 0 27 hm5C_associated_SNPs_34826 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:47065740-47065760
64251 chr19 1434818 1434818 1 + C T SKCM 1434815 + 1434795 1434835 41 CCTCCTTCCTACGGGGGTCCCTCCGTGCCAGGGTCGGGGGG CCTCCTTCCTACGGGGGTCCCTCTGTGCCAGGGTCGGGGGG < 41bp 1 0.76789539448077 1 0.551924169063568 experiment 0.46420921103846 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434815 chr19:1434818 synonymous SNV . 0 24 hm5C_associated_SNPs_34831 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr19 1434818 1434818 1 + C T SKCM 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCTGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG < 41bp 1 0.349289704880862 1 0.186862111091614 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434818 synonymous SNV . 0 3 hm5C_associated_SNPs_34832 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr19 1434818 1434818 1 + C T SKCM 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CTGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC < 41bp 1 0.371093649761533 1 0.147155970335007 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434818 synonymous SNV . 0 2 hm5C_associated_SNPs_34833 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr19 1434818 1434818 1 + C T SKCM 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT TGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT < 41bp 1 0.511401314245762 1 0.462335526943207 experiment 0.977197371508476 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434818 synonymous SNV . 0 1 hm5C_associated_SNPs_34834 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr13 115089945 115089945 1 + C T SKCM 115089952 + 115089932 115089972 41 AGAACCACAGAAACCTGCCCCTGTATCTCCTGAGTCAGTAA AGAACCACAGAAATCTGCCCCTGTATCTCCTGAGTCAGTAA < 41bp 1 0.477340492274447 1 0.666405916213989 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115089952 chr13:115089945 nonsynonymous SNV 0.746 0 14 hm5C_associated_SNPs_34835 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr13:115089940-115089960
64251 chr12 132400481 132400481 1 + G A SKCM 132400500 + 132400480 132400520 41 TGCCGCCTGCACAGCGCCCCCAACCTGTCTGACTTGCACGT TACCGCCTGCACAGCGCCCCCAACCTGTCTGACTTGCACGT < 41bp 1 0.197189526213167 1 0.0763790607452393 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400500 chr12:132400481 nonsynonymous SNV 0.940 0 2 hm5C_associated_SNPs_34836 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585674 chr12:132400463-132400493
64251 chr1 155028639 155028639 1 + C T SKCM 155028630 + 155028610 155028650 41 CAGCGTGACCTGGTGGAGATCAGCCCAAACCCAGCTGTCAC CAGCGTGACCTGGTGGAGATCAGCCCAAATCCAGCTGTCAC < 41bp 1 0.552728572014931 1 0.410055309534073 experiment 0.894542855970138 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155028630 chr1:155028639 synonymous SNV . 0 30 hm5C_associated_SNPs_34838 0 0 1 FXR2 POSTAR2 ENCODE chr1:155028586-155028639
64251 chr5 139917070 139917070 1 + G A SKCM 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCAAATTC < 41bp 1 0.280689256979652 1 0.535064041614532 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917070 nonsynonymous SNV 0.996 4 36 hm5C_associated_SNPs_34840 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139917069-139917094
64251 chr17 53014064 53014064 1 + C T SKCM 53014053 + 53014033 53014073 41 TTTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA TTTTGGAGCAAAATAAGAACCAGAAGGAAGCTACCAATGTA < 41bp 1 0.706076193126643 1 0.590216875076294 experiment 0.587847613746713 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014053 chr17:53014064 synonymous SNV . 0 32 hm5C_associated_SNPs_34849 0 0 1 SF3B4 POSTAR2 ENCODE chr17:53013971-53014065
64251 chr14 64909104 64909104 1 + A T SKCM 64909115 + 64909095 64909135 41 TCAAGATGCACGGGGGCGGCCCCACGGTGAGTGGTGGGTTG TCAAGATGCTCGGGGGCGGCCCCACGGTGAGTGGTGGGTTG < 41bp 1 0.268590538067573 1 0.419808030128479 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909115 chr14:64909104 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_34850 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64909073-64909104
64251 chr14 64909105 64909105 1 + C T SKCM 64909115 + 64909095 64909135 41 TCAAGATGCACGGGGGCGGCCCCACGGTGAGTGGTGGGTTG TCAAGATGCATGGGGGCGGCCCCACGGTGAGTGGTGGGTTG < 41bp 1 0.246997027692094 1 0.301707625389099 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909115 chr14:64909105 synonymous SNV . 0 11 hm5C_associated_SNPs_34851 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:64909085-64909112
64251 chr11 61630767 61630767 1 + C T SKCM 61630766 + 61630746 61630786 41 TCTTGCAGGTTCCTGGAGAGCCACTGGTTTGTGTGGGTCAC TCTTGCAGGTTCCTGGAGAGCTACTGGTTTGTGTGGGTCAC < 41bp 1 0.454461494597985 1 0.25663024187088 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61630766 chr11:61630767 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_34852 0 0 5 PPIG POSTAR2 ENCODE chr11:61630751-61630794
64251 chr19 30502112 30502112 1 + C T SKCM 30502098 + 30502078 30502118 41 CAGCACTGGCAGTGGCCACTCTGCCCAGGAGCTGCCGACCA CAGCACTGGCAGTGGCCACTCTGCCCAGGAGCTGTCGACCA < 41bp 1 0.79949883026978 1 0.239427745342255 experiment 0.40100233946044 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30502098 chr19:30502112 nonsynonymous SNV 0.412 3 35 hm5C_associated_SNPs_34853 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:30502092-30502123
64251 chr7 44796724 44796724 1 + C T SKCM 44796719 + 44796699 44796739 41 GGCGTGTACAGCCGCGGGGGCTACCCTGGGGCCCCCGGCTT GGCGTGTACAGCCGCGGGGGCTACCTTGGGGCCCCCGGCTT < 41bp 1 0.357685457515628 1 0.119005918502808 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44796719 chr7:44796724 nonsynonymous SNV 0.942 4 26 hm5C_associated_SNPs_34854 0 0 1 PPIG POSTAR2 ENCODE chr7:44796683-44796727
64251 chr6 33169579 33169579 1 + C T SKCM 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCTCCGTGGA < 41bp 1 0.143371124441266 1 0.0619710981845856 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169579 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_34855 0 0 18 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr8 17055097 17055097 1 + G A SKCM 17055095 + 17055075 17055115 41 AGCTTTTTGTCCCTAGCCATCCGATACTGTGACAGATGCCA AGCTTTTTGTCCCTAGCCATCCAATACTGTGACAGATGCCA < 41bp 1 0.0984202865952563 1 0.12864950299263 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZDHHC2 ENSG00000104219 CDS Human protein_coding chr8:17055095 chr8:17055097 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_34856 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:17055095-17055127
64251 chr1 32626295 32626295 1 + C T SKCM 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACGTCTTGAACTGTTCCATCCTTAATCTTTTGTTAACGTGA < 41bp 1 0.147922571173178 1 0.474185347557068 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626295 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_34857 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32626227-32626297
64251 chr8 56864641 56864641 1 + C T SKCM 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTTCCT < 41bp 1 0.708466233545871 1 0.898177146911621 experiment 0.583067532908258 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864641 nonsynonymous SNV 0.998 0 38 hm5C_associated_SNPs_34859 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr22 45923826 45923826 1 + C T SKCM 45923825 + 45923805 45923845 41 TACCAGTGTGGACAGGTCTTCCAGGCATGCTGTGTCAAGAG TACCAGTGTGGACAGGTCTTCTAGGCATGCTGTGTCAAGAG < 41bp 1 0.703937090180859 1 0.537134289741516 experiment 0.592125819638282 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45923825 chr22:45923826 stopgain 0.880 1 22 hm5C_associated_SNPs_34860 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:45923802-45923826
64251 chr8 38899581 38899581 1 + C T SKCM 38899577 + 38899557 38899597 41 CTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTG CTGATGAAGCCTATAGTGCTCCCTTCTGTGGTAATAAGTTG < 41bp 1 0.126521041335209 1 0.0460838973522186 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899577 chr8:38899581 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_34861 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr19 52195888 52195888 1 + T C SKCM 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGGCACCCACCCGTAGAACCGACCCTGCGGGGCCTTCGC < 41bp 1 0.244890899631485 1 0.0906893610954285 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195882 chr19:52195888 . . 0 27 hm5C_associated_SNPs_34862 0 0 17 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:52195870-52195889
64251 chr19 52195888 52195888 1 + T C SKCM 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGGCACCCACCCGTAGAACCGACCCTGCGGGGCCTTCGCC < 41bp 1 0.379518696166496 1 0.18307700753212 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195883 chr19:52195888 . . 0 26 hm5C_associated_SNPs_34863 0 0 17 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:52195870-52195889
64251 chr19 52195888 52195888 1 + T C SKCM 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCCTGCGGGGCCTTCGCCGCA < 41bp 1 0.216655224205687 1 0.0245927572250366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195888 . . 0 23 hm5C_associated_SNPs_34864 0 0 17 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:52195870-52195889
64251 chr19 52195888 52195888 1 + T C SKCM 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCCTGCGGGGCCTTCGCCGCAC < 41bp 1 0.208546663770746 1 0.308486521244049 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195888 . . 0 22 hm5C_associated_SNPs_34865 0 0 17 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:52195870-52195889
64251 chr22 29445766 29445766 1 + C T SKCM 29445774 + 29445754 29445794 41 TTCAGCTGCTATCACGGCCACCGCTCGGTGTGCAGTGGCTA TTCAGCTGCTATTACGGCCACCGCTCGGTGTGCAGTGGCTA < 41bp 1 0.0894245001043624 1 0.0580606162548065 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445774 chr22:29445766 nonsynonymous SNV 0.996 4 13 hm5C_associated_SNPs_34866 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:29445765-29445766
64251 chr12 57919750 57919750 1 + C T SKCM 57919754 + 57919734 57919774 41 CCAAGGCACAGCATCCCCCACTACCCCCTCCCAGCACTTTA CCAAGGCACAGCATCCTCCACTACCCCCTCCCAGCACTTTA < 41bp 1 0.138339245554452 1 0.0638592839241028 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919754 chr12:57919750 synonymous SNV . 0 17 hm5C_associated_SNPs_34867 0 0 5 DDX59 POSTAR2 ENCODE chr12:57919683-57919768
64251 chr19 39215191 39215191 1 + C T SKCM 39215182 + 39215162 39215202 41 GCCAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATG GCCAGGCCAATGTTGTGGGGCCCTGGATCTAGACCAAGATG < 41bp 1 0.0908451953576322 1 0.0329121947288513 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215182 chr19:39215191 stopgain 1.000 1 30 hm5C_associated_SNPs_34869 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215191 39215191 1 + C T SKCM 39215184 + 39215164 39215204 41 CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGA CAGGCCAATGTTGTGGGGCCCTGGATCTAGACCAAGATGGA < 41bp 1 0.697657418125216 1 0.610700011253357 experiment 0.604685163749568 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215184 chr19:39215191 stopgain 1.000 1 28 hm5C_associated_SNPs_34870 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215191 39215191 1 + C T SKCM 39215195 + 39215175 39215215 41 TGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGGCACG TGTGGGGCCCTGGATCTAGACCAAGATGGAGGTGAGGCACG < 41bp 1 0.335699555554688 1 0.312009483575821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215195 chr19:39215191 stopgain 1.000 1 17 hm5C_associated_SNPs_34871 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr12 57167947 57167947 1 + G A SKCM 57167934 + 57167914 57167954 41 CTACTCAGTGGGTGAAGGAGCATGTGGGGGACAGAGGTATG CTACTCAGTGGGTGAAGGAGCATGTGGGGGACAAAGGTATG < 41bp 1 0.477499761627212 1 0.354485869407654 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57167934 chr12:57167947 nonsynonymous SNV 0.993 1 34 hm5C_associated_SNPs_34872 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:57167919-57167947
64251 chr15 85164130 85164130 1 + C T SKCM 85164140 + 85164120 85164160 41 AGCCGGAAATCCCACCTCATCACACACGAGAGGACCCACAC AGCCGGAAATTCCACCTCATCACACACGAGAGGACCCACAC < 41bp 1 0.456646522909111 1 0.45521479845047 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164140 chr15:85164130 nonsynonymous SNV 0.987 4 11 hm5C_associated_SNPs_34874 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:85164125-85164147
64251 chr13 93879766 93879766 1 + C A SKCM 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTACCCGCCGGGGCGGATGTGAAGGCTC < 41bp 1 0.597284835530068 1 0.856162905693054 experiment 0.805430328939864 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879766 synonymous SNV . 0 16 hm5C_associated_SNPs_34877 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr18 9257470 9257470 1 + C T SKCM 9257488 + 9257468 9257508 41 TCCAGTGCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCC TCTAGTGCATTTAGAGCCATCTAGTCAGGTTGGTGTGATCC < 41bp 1 0.305680509532499 1 0.245185911655426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9257488 chr18:9257470 nonsynonymous SNV 0.794 1 3 hm5C_associated_SNPs_34878 0 0 1 YBX3 POSTAR2 ENCODE chr18:9257416-9257486
64251 chr17 75210098 75210098 1 + C T SKCM 75210096 + 75210076 75210116 41 TCCCACTCCAGCTCCATGATCTCCAGGTAGTGCCGCGCTGC TCCCACTCCAGCTCCATGATCTTCAGGTAGTGCCGCGCTGC < 41bp 1 0.697782417635746 1 0.217097759246826 experiment 0.604435164728507 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75210096 chr17:75210098 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_34880 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:75210075-75210101
64251 chr3 170078455 170078455 1 + C T SKCM 170078471 + 170078451 170078491 41 ATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT ATTCTCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT < 41bp 1 0.124011026624595 1 0.0364512205123901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170078471 chr3:170078455 synonymous SNV . 0 5 hm5C_associated_SNPs_34883 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:170078413-170078459
64251 chr2 136396198 136396198 1 + C T SKCM 136396190 + 136396170 136396210 41 ATCTATTCTTTTTTCTAGTCCCTGTGTTCCCAAGAGAATTA ATCTATTCTTTTTTCTAGTCCCTGTGTTTCCAAGAGAATTA < 41bp 1 0.0249041855861097 1 0.0485671162605286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136396190 chr2:136396198 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_34884 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:136396180-136396200
64251 chr1 12317070 12317070 1 + C T SKCM 12317053 + 12317033 12317073 41 CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTCCTC CTAATACAAAGCTGCAATACCGGCAAATCATGGAATTTCTC < 41bp 1 0.224164620003394 1 0.440597683191299 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12317053 chr1:12317070 synonymous SNV . 0 38 hm5C_associated_SNPs_34885 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:12317050-12317077
64251 chr2 182766562 182766562 1 + C T SKCM 182766571 + 182766551 182766591 41 TTCTCAAGTCTCCGGGACGCCCCTGCAGAGAATTGGAAGTA TTCTCAAGTCTTCGGGACGCCCCTGCAGAGAATTGGAAGTA < 41bp 1 0.212480206720777 1 0.0540726482868195 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182766571 chr2:182766562 nonsynonymous SNV 0.995 4 12 hm5C_associated_SNPs_34886 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:182766532-182766563
64251 chr2 71577112 71577112 1 + C T SKCM 71577126 + 71577106 71577146 41 TAATTTCATCTGTAAGCCAGCAAGAGCGGATCCCACATGAA TAATTTTATCTGTAAGCCAGCAAGAGCGGATCCCACATGAA < 41bp 1 0.496473385646434 1 0.717303156852722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71577126 chr2:71577112 nonsynonymous SNV 0.519 1 7 hm5C_associated_SNPs_34887 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:71576926-71577160
64251 chr15 41192218 41192218 1 + C T SKCM 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCATCTA < 41bp 1 0.302760347119261 1 0.424657464027405 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192218 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_34888 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr15 41192218 41192218 1 + C T SKCM 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCATCTAT < 41bp 1 0.744857676627682 1 0.878353178501129 experiment 0.510284646744637 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192218 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_34889 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr1 17949637 17949637 1 + C T SKCM 17949656 + 17949636 17949676 41 CCACCGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT CTACCGAGAAGATCGGGGACCTCTTCGTGGCCTCGGTAAGT < 41bp 1 0.117692075361068 1 0.0309090614318848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10L ENSG00000074964 CDS Human protein_coding chr1:17949656 chr1:17949637 synonymous SNV . 0 2 hm5C_associated_SNPs_34890 0 0 2 BUD13 POSTAR2 ENCODE chr1:17949614-17949637
64251 chr11 130005579 130005579 1 + C T SKCM 130005561 + 130005541 130005581 41 TCTGAGGAGAGTGAGGAGATCCCACCGTTCCACCCCTTCCA TCTGAGGAGAGTGAGGAGATCCCACCGTTCCACCCCTTTCA < 41bp 1 0.251470553286877 1 0.103022843599319 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130005561 chr11:130005579 synonymous SNV . 0 39 hm5C_associated_SNPs_34893 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr11:130005544-130005583
64251 chr15 41192217 41192217 1 + A T SKCM 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCTCCTA < 41bp 1 0.329471430820249 1 0.455880165100098 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192217 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_34895 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr15 41192217 41192217 1 + A T SKCM 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCTCCTAT < 41bp 1 0.771110806859698 1 0.859505176544189 experiment 0.457778386280604 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192217 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_34896 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr7 44741211 44741211 1 + C T SKCM 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTT < 41bp 1 0.177675950536711 1 0.59520560503006 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741211 nonsynonymous SNV 0.945 0 41 hm5C_associated_SNPs_34901 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr4 76711331 76711331 1 + G A SKCM 76711339 + 76711319 76711359 41 CAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTACTTT CAGAAGTTATTCAAGGCTGCCAAGTAAACCAAGACTACTTT < 41bp 1 0.355909928700145 1 0.285944908857346 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76711339 chr4:76711331 nonsynonymous SNV 0.997 3 13 hm5C_associated_SNPs_34902 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:76711305-76711339
64251 chr2 42886981 42886981 1 + A G SKCM 42886977 + 42886957 42886997 41 TAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCA TAGTTTGCATATGAGTGCTGCTGCGGCTTCCCGAGACATCA < 41bp 1 0.196402211917399 1 0.204963505268097 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTA3 ENSG00000057935 CDS Human protein_coding chr2:42886977 chr2:42886981 synonymous SNV . 0 25 hm5C_associated_SNPs_34903 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:42886967-42886994
64251 chr17 54912436 54912436 1 + G A SKCM 54912447 + 54912427 54912467 41 GGGCTCCGCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAA GGGCTCCGCATGGACGAGGGCTGCCTCAGGAAGGCCGACAA < 41bp 1 0.597809138767911 1 0.0836111903190613 experiment 0.804381722464178 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912447 chr17:54912436 nonsynonymous SNV 0.998 5 10 hm5C_associated_SNPs_34904 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:54912396-54912439
64251 chr8 133855033 133855033 1 + T C SKCM 133855017 + 133854997 133855037 41 TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTCAGTA < 41bp 1 0.585764083923084 1 0.553044378757477 experiment 0.828471832153832 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133855017 chr8:133855033 synonymous SNV . 0 37 hm5C_associated_SNPs_34905 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133854993-133855045
64251 chr19 10941706 10941706 1 + C T SKCM 10941686 + 10941666 10941706 41 TGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGC TGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGT < 41bp 1 0.048202950800998 1 0.0773702263832092 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941686 chr19:10941706 nonsynonymous SNV 0.996 1 41 hm5C_associated_SNPs_34907 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr19 10941706 10941706 1 + C T SKCM 10941687 + 10941667 10941707 41 GCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCC GCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGTC < 41bp 1 0.261595524678367 1 0.0709146559238434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941687 chr19:10941706 nonsynonymous SNV 0.996 1 40 hm5C_associated_SNPs_34908 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10941677-10941712
64251 chr11 67376978 67376978 1 + C T SKCM 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACTGG < 41bp 1 0.436945492100893 1 0.729698717594147 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376978 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_34910 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:67376972-67376998
64251 chr20 30753170 30753170 1 + C T SKCM 30753183 + 30753163 30753203 41 CTTCTGGCTGCTAACGGGTACCATCGGCTTCTATGCAGCCT CTTCTGGTTGCTAACGGGTACCATCGGCTTCTATGCAGCCT < 41bp 1 0.0450069099004003 1 0.149414449930191 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30753183 chr20:30753170 synonymous SNV . 0 8 hm5C_associated_SNPs_34911 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:30753150-30753180
64251 chr7 91735013 91735013 1 + G A SKCM 91735017 + 91734997 91735037 41 AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT AATTTTTGGTTCGACGATGGCATCGAGTCACAGGTTCTGTT < 41bp 1 0.142934764156801 1 0.144134610891342 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91735017 chr7:91735013 synonymous SNV . 0 17 hm5C_associated_SNPs_34913 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:91735000-91735020
64251 chr4 76711342 76711342 1 + G A SKCM 76711339 + 76711319 76711359 41 CAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTACTTT CAGAAGTTATTCGAGGCTGCCAAATAAACCAAGACTACTTT < 41bp 1 0.230660916460121 1 0.463884383440018 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76711339 chr4:76711342 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_34914 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:76711312-76711366
64251 chrX 48369807 48369807 1 + C T SKCM 48369821 + 48369801 48369841 41 GCTGTTCCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCC GCTGTTTCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCC < 41bp 1 0.0750325726349174 1 0.0501386225223541 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PORCN ENSG00000102312 CDS Human protein_coding chrX:48369821 chrX:48369807 nonsynonymous SNV . 0 7 hm5C_associated_SNPs_34925 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chrX:48369807-48369808
64251 chr1 57157076 57157076 1 + G A SKCM 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGTAATCAGCACTCCAACAGATTTTTTTAT < 41bp 1 0.0488095043315406 1 0.25661963224411 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157076 synonymous SNV . 0 15 hm5C_associated_SNPs_34926 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:57157066-57157093
64251 chrX 69639608 69639608 1 + C T SKCM 69639607 + 69639587 69639627 41 CAGGATTGAGCTTCTTTAATCCCGTCTGTGCCACCCCCAAT CAGGATTGAGCTTCTTTAATCTCGTCTGTGCCACCCCCAAT < 41bp 1 0.661113812970781 1 0.239813387393951 experiment 0.677772374058438 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639607 chrX:69639608 nonsynonymous SNV 0.870 2 22 hm5C_associated_SNPs_34928 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:69639604-69639624
64251 chr19 14562765 14562765 1 + C T SKCM 14562777 + 14562757 14562797 41 CGCCCAGCCCGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG CGCCCAGCTCGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG < 41bp 1 0.589758242376012 1 0.808225870132446 experiment 0.820483515247975 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562777 chr19:14562765 synonymous SNV . 0 9 hm5C_associated_SNPs_34929 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14562763-14562785
64251 chr5 142264914 142264914 1 + G A SKCM 142264910 + 142264890 142264930 41 ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTT ACAGAAAAGTATTGTGGCATCTTAAAAAAACACTTGAATTT < 41bp 1 0.172885068694565 1 0.366065621376038 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142264910 chr5:142264914 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_34930 0 0 1 GRWD1 POSTAR2 ENCODE chr5:142264899-142264965
64251 chr21 42629149 42629149 1 + C T SKCM 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCTATCCACAAATGCGCTGGTGATCGGTGCCACGGTG < 41bp 1 0.518418254231845 1 0.183394521474838 experiment 0.963163491536311 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629149 nonsynonymous SNV 0.855 0 7 hm5C_associated_SNPs_34932 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr19 14562766 14562766 1 + C T SKCM 14562777 + 14562757 14562797 41 CGCCCAGCCCGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG CGCCCAGCCTGGGGCCTTTACAGCCGAAGCGGAAGCCTCAG < 41bp 1 0.581065979352004 1 0.773245453834534 experiment 0.837868041295991 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562777 chr19:14562766 nonsynonymous SNV 0.952 3 10 hm5C_associated_SNPs_34933 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14562763-14562785
64251 chr6 149691194 149691194 1 + C T SKCM 149691182 + 149691162 149691202 41 TTCAGGTTTTACATGACCTGCGACAAAAATTCCCTGAAGTA TTCAGGTTTTACATGACCTGCGACAAAAATTCTCTGAAGTA < 41bp 1 0.510538009842296 1 0.222627967596054 experiment 0.978923980315407 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAB2 ENSG00000055208 CDS Human protein_coding chr6:149691182 chr6:149691194 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_34934 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr6:149691158-149691194
64251 chr5 90083966 90083966 1 + G A SKCM 90083965 + 90083945 90083985 41 GACATTGCAGACCCAGTGAGCGGGTTGTTCTATTTTGGAGA GACATTGCAGACCCAGTGAGCAGGTTGTTCTATTTTGGAGA < 41bp 1 0.1576536139803 1 0.763437271118164 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADGRV1 ENSG00000164199 CDS Human protein_coding chr5:90083965 chr5:90083966 nonsynonymous SNV 0.104 4 22 hm5C_associated_SNPs_34935 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr5:90083960-90083980
64251 chr11 598398 598398 1 + C T SKCM 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG GTCTTTCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG < 41bp 1 0.135634290945272 1 0.35151869058609 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598398 nonsynonymous SNV 0.146 4 6 hm5C_associated_SNPs_34936 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:598374-598412
64251 chr16 23700962 23700962 1 + C T SKCM 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACTTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA < 41bp 1 0.190336303018708 1 0.131855338811874 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700962 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_34937 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23700913-23700979
64251 chr19 7676661 7676661 1 + C T SKCM 7676663 + 7676643 7676683 41 GGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCT GGAGACCCTGTGCTCCTCTGCTCTGTGAGCTCGGACAGCCT < 41bp 1 0.284400253289427 1 0.153377294540405 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676663 chr19:7676661 nonsynonymous SNV 0.982 3 19 hm5C_associated_SNPs_34938 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr1 173454548 173454548 1 + C T SKCM 173454543 + 173454523 173454563 41 AGAGCCCACAGAAAAGTTACCTTTTCCCATCATCGATGATA AGAGCCCACAGAAAAGTTACCTTTTTCCATCATCGATGATA < 41bp 1 0.10453367319268 1 0.00985977053642273 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454543 chr1:173454548 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_34940 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173454502-173454552
64251 chr6 7581130 7581130 1 + G A SKCM 7581110 + 7581090 7581130 41 TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAG TCACGCGGTTCCAGAACTCTCTGAAAGAGCTGCAGCTGCAA < 41bp 1 0.772047564940767 1 0.69660747051239 experiment 0.455904870118466 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581110 chr6:7581130 synonymous SNV . 0 41 hm5C_associated_SNPs_34941 0 0 3 AGGF1 POSTAR2 ENCODE chr6:7581130-7581197
64251 chr6 7581130 7581130 1 + G A SKCM 7581119 + 7581099 7581139 41 TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAG TCCAGAACTCTCTGAAAGAGCTGCAGCTGCAAAAGCAGAAG < 41bp 1 0.726134378346258 1 0.313889175653458 experiment 0.547731243307483 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581119 chr6:7581130 synonymous SNV . 0 32 hm5C_associated_SNPs_34942 0 0 3 AGGF1 POSTAR2 ENCODE chr6:7581130-7581197
64251 chr6 7581130 7581130 1 + G A SKCM 7581125 + 7581105 7581145 41 ACTCTCTGAAAGAGCTGCAGCTGCAGAAGCAGAAGGTGGAA ACTCTCTGAAAGAGCTGCAGCTGCAAAAGCAGAAGGTGGAA < 41bp 1 0.642898126036436 1 0.549298524856567 experiment 0.714203747927129 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7581125 chr6:7581130 synonymous SNV . 0 26 hm5C_associated_SNPs_34943 0 0 3 AGGF1 POSTAR2 ENCODE chr6:7581130-7581197
64251 chr10 70525792 70525792 1 + C T SKCM 70525803 + 70525783 70525823 41 TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAAGA TTGAGTGTCTTATTGGACTACAGATTAGAGGATAATAAAGA < 41bp 1 0.234427854993762 1 0.336956381797791 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70525803 chr10:70525792 synonymous SNV . 0 10 hm5C_associated_SNPs_34944 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70525699-70525836
64251 chr19 50983459 50983459 1 + C T SKCM 50983456 + 50983436 50983476 41 GGAAGCTGGTGGCTATGTCTCCTCCTTTGTCCCTGCGGTGA GGAAGCTGGTGGCTATGTCTCCTTCTTTGTCCCTGCGGTGA < 41bp 1 0.0633663023343558 1 0.154699176549911 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMC10 ENSG00000161671 CDS Human protein_coding chr19:50983456 chr19:50983459 nonsynonymous SNV 0.807 4 24 hm5C_associated_SNPs_34945 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50983440-50983464
64251 chr9 33912014 33912014 1 + C G SKCM 33912033 + 33912013 33912053 41 CCCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAAATGGA CGCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAAATGGA < 41bp 1 0.138940540068682 1 0.0724875032901764 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33912033 chr9:33912014 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_34946 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:33911989-33912017
64251 chr17 43323053 43323053 1 + C T SKCM 43323037 + 43323017 43323057 41 GTGGAGTACTTCGGAGAGAACCCCAAGACCACATCCCCAGG GTGGAGTACTTCGGAGAGAACCCCAAGACCACATCCTCAGG < 41bp 1 0.4569715250029 1 0.291624009609222 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43323037 chr17:43323053 nonsynonymous SNV 0.838 4 37 hm5C_associated_SNPs_34949 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:43323043-43323077
64251 chr10 102112181 102112181 1 + G A SKCM 102112188 + 102112168 102112208 41 CTCATCGTCTGTGGAGCCACCGCTCTTACAAAGCTCGGCTG CTCATCGTCTGTGAAGCCACCGCTCTTACAAAGCTCGGCTG < 41bp 1 0.312956613488361 1 0.445779979228973 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102112188 chr10:102112181 stopgain 0.887 1 14 hm5C_associated_SNPs_34954 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:102112134-102112187
64251 chr17 37676259 37676259 1 + C T SKCM 37676240 + 37676220 37676260 41 CAGCACTTGATTTATTGGACCACATGCTGACACTAGATCCT CAGCACTTGATTTATTGGACCACATGCTGACACTAGATCTT < 41bp 1 0.143344659298962 1 0.0492675304412842 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676240 chr17:37676259 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_34955 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:37676220-37676264
64251 chr17 37676259 37676259 1 + C T SKCM 37676272 + 37676252 37676292 41 CTAGATCCTAGTAAGCGGTGCACAGCTGAACAGACCCTACA CTAGATCTTAGTAAGCGGTGCACAGCTGAACAGACCCTACA < 41bp 1 0.209714270647293 1 0.162405729293823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37676272 chr17:37676259 nonsynonymous SNV 0.999 4 8 hm5C_associated_SNPs_34956 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:37676220-37676264
64251 chr1 44069402 44069402 1 + C T SKCM 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGTCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.395155312364092 1 0.126823157072067 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069402 nonsynonymous SNV 0.566 1 5 hm5C_associated_SNPs_34957 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr22 20755036 20755036 1 + C T SKCM 20755030 + 20755010 20755050 41 ATGTGATGTTGGAGAACTACCAGAACCTTCTTGCCCTAGGT ATGTGATGTTGGAGAACTACCAGAACTTTCTTGCCCTAGGT < 41bp 1 0.782374072150179 1 0.639941573143005 experiment 0.435251855699641 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20755030 chr22:20755036 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_34964 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:20754991-20755039
64251 chr2 86705312 86705312 1 + C T SKCM 86705303 + 86705283 86705323 41 TTATTTGCAGGTGCTGCTTACAAGACTTTCTCTTGGCTAAA TTATTTGCAGGTGCTGCTTACAAGACTTTTTCTTGGCTAAA < 41bp 1 0.526111738613603 1 0.37786602973938 experiment 0.947776522772795 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM3A ENSG00000115548 CDS Human protein_coding chr2:86705303 chr2:86705312 synonymous SNV . 0 30 hm5C_associated_SNPs_34966 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:86705304-86705352
64251 chr16 2122313 2122313 1 + C T SKCM 2122321 + 2122301 2122341 41 TAAAGTGCTCATCTTTACTTCCCCTTGCAGTGTGGACCAGC TAAAGTGCTCATTTTTACTTCCCCTTGCAGTGTGGACCAGC < 41bp 1 0.102161814905649 1 0.0213526487350464 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2122321 chr16:2122313 synonymous SNV . 0 13 hm5C_associated_SNPs_34968 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2122300-2122320
64251 chr10 106014944 106014944 1 + C T SKCM 106014932 + 106014912 106014952 41 CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCCCGGAGGGC CCCCGGCAGGAAGCGCGCCCCCGGGGCCGGTCTCGGAGGGC < 41bp 1 0.759382875444717 1 0.861501336097717 experiment 0.481234249110565 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106014932 chr10:106014944 nonsynonymous SNV 0.498 3 33 hm5C_associated_SNPs_34969 0 0 19 FUS POSTAR2 DRA001158,DRS012384 chr10:106014940-106014997
64251 chr11 68131380 68131380 1 + C T SKCM 68131399 + 68131379 68131419 41 TCCAGGTGCTGAGCCAGGAGCGGCAGCCTTTCTGTGAGTGC TTCAGGTGCTGAGCCAGGAGCGGCAGCCTTTCTGTGAGTGC < 41bp 1 0.632439459937736 1 0.349342346191406 experiment 0.735121080124528 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68131399 chr11:68131380 synonymous SNV . 0 2 hm5C_associated_SNPs_34970 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr11:68131363-68131381
64251 chr2 211456626 211456626 1 + C T SKCM 211456636 + 211456616 211456656 41 CATGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAA CATGGCTATGTCTTGGACAACACCCTCCCTGCTGGCTGGAA < 41bp 1 0.228879066654749 1 0.0752942562103271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456636 chr2:211456626 nonsynonymous SNV 0.994 3 11 hm5C_associated_SNPs_34972 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:211456614-211456635
64251 chr2 211456626 211456626 1 + C T SKCM 211456638 + 211456618 211456658 41 TGGCTATGCCTTGGACAACACCCTCCCTGCTGGCTGGAAAC TGGCTATGTCTTGGACAACACCCTCCCTGCTGGCTGGAAAC < 41bp 1 0.0527104058280887 1 0.11089363694191 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPS1 ENSG00000021826 CDS Human protein_coding chr2:211456638 chr2:211456626 nonsynonymous SNV 0.994 3 9 hm5C_associated_SNPs_34973 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:211456614-211456635
64251 chr17 19216468 19216468 1 + C T SKCM 19216480 + 19216460 19216500 41 GATGCTCTCCCCAGCTCGGGCCCCGCGGCCCAGAAAGCAGA GATGCTCTTCCCAGCTCGGGCCCCGCGGCCCAGAAAGCAGA < 41bp 1 0.16804722594682 1 0.13419908285141 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EPN2 ENSG00000072134 CDS Human protein_coding chr17:19216480 chr17:19216468 synonymous SNV . 0 9 hm5C_associated_SNPs_34980 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:19216454-19216473
64251 chr16 597807 597807 1 + C T SKCM 597822 + 597802 597842 41 ATTGACCTGGCCGGAGACACCGTGCGTTACACGCCCGCCAG ATTGATCTGGCCGGAGACACCGTGCGTTACACGCCCGCCAG < 41bp 1 0.638138304044769 1 0.769440650939941 experiment 0.723723391910462 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:597822 chr16:597807 synonymous SNV . 0 6 hm5C_associated_SNPs_34982 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:597776-597810
64251 chr3 193336693 193336693 1 + C T SKCM 193336676 + 193336656 193336696 41 AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCGTG AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATTGTG < 41bp 1 0.0438712991258159 1 0.0392166078090668 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336676 chr3:193336693 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_34983 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:193336680-193336700
64251 chr19 50912133 50912133 1 + C T SKCM 50912125 + 50912105 50912145 41 CCACAACCTGTGTTACACCACGCTCCTTCGGCCCGGGACTG CCACAACCTGTGTTACACCACGCTCCTTTGGCCCGGGACTG < 41bp 1 0.179037226049424 1 0.26110577583313 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912125 chr19:50912133 nonsynonymous SNV 0.091 2 29 hm5C_associated_SNPs_34984 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50912116-50912143
64251 chr14 75746585 75746585 1 + C T SKCM 75746582 + 75746562 75746602 41 CCTTCTGTTTTGTTCTAGGACTTCTGCACGGACCTGGCCGT CCTTCTGTTTTGTTCTAGGACTTTTGCACGGACCTGGCCGT < 41bp 1 0.0904659611827078 1 0.0085122287273407 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746582 chr14:75746585 synonymous SNV . 0 24 hm5C_associated_SNPs_34985 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746590 + 75746570 75746610 41 TTTGTTCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTG TTTGTTCTAGGACTTTTGCACGGACCTGGCCGTCTCCAGTG < 41bp 1 0.489064224078705 1 0.484352827072144 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746590 chr14:75746585 synonymous SNV . 0 16 hm5C_associated_SNPs_34986 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746594 + 75746574 75746614 41 TTCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAA TTCTAGGACTTTTGCACGGACCTGGCCGTCTCCAGTGCCAA < 41bp 1 0.144719267823 1 0.0843986570835114 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746594 chr14:75746585 synonymous SNV . 0 12 hm5C_associated_SNPs_34987 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746595 + 75746575 75746615 41 TCTAGGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAAC TCTAGGACTTTTGCACGGACCTGGCCGTCTCCAGTGCCAAC < 41bp 1 0.466433824838491 1 0.0716502368450165 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746595 chr14:75746585 synonymous SNV . 0 11 hm5C_associated_SNPs_34988 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746599 + 75746579 75746619 41 GGACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCA GGACTTTTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCA < 41bp 1 0.054028439268148 1 0.0193266868591309 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746599 chr14:75746585 synonymous SNV . 0 7 hm5C_associated_SNPs_34989 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746600 + 75746580 75746620 41 GACTTCTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCAT GACTTTTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCAT < 41bp 1 0.0708962884345335 1 0.0511701703071594 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746600 chr14:75746585 synonymous SNV . 0 6 hm5C_associated_SNPs_34990 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr14 75746585 75746585 1 + C T SKCM 75746605 + 75746585 75746625 41 CTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCATTCCCA TTGCACGGACCTGGCCGTCTCCAGTGCCAACTTCATTCCCA < 41bp 1 0.408854263076074 1 0.343775868415833 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FOS ENSG00000170345 CDS Human protein_coding chr14:75746605 chr14:75746585 synonymous SNV . 0 1 hm5C_associated_SNPs_34991 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:75746580-75746600
64251 chr16 30680926 30680926 1 + C T SKCM 30680941 + 30680921 30680961 41 CAGTTCCCCACCTAGGGGCCCTGGCCCAGCTCGGGCTGACA CAGTTTCCCACCTAGGGGCCCTGGCCCAGCTCGGGCTGACA < 41bp 1 0.23023829963233 1 0.0392715930938721 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30680941 chr16:30680926 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_34995 0 0 1 RBM15 POSTAR2 ENCODE chr16:30680891-30680941
64251 chr1 46070653 46070653 1 + C T SKCM 46070650 + 46070630 46070670 41 GCTAATGAGTGTGGAGAAGCCTTCTTTTTCTATGGGAAATC GCTAATGAGTGTGGAGAAGCCTTTTTTTTCTATGGGAAATC < 41bp 1 0.131992456763282 1 0.0375110805034637 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46070650 chr1:46070653 synonymous SNV . 0 24 hm5C_associated_SNPs_34996 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr1:46070607-46070686
64251 chr19 46509882 46509882 1 + G A SKCM 46509891 + 46509871 46509911 41 CGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC CGGAACCGCAAAATGGGGGGCCGCCCAGGCTCCTTGGCCCC < 41bp 1 0.0798475749081885 1 0.102805644273758 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509891 chr19:46509882 synonymous SNV . 0 12 hm5C_associated_SNPs_34999 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr19 46509882 46509882 1 + G A SKCM 46509892 + 46509872 46509912 41 GGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC GGAACCGCAAAATGGGGGGCCGCCCAGGCTCCTTGGCCCCC < 41bp 1 0.247111386587416 1 0.0730681717395782 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509892 chr19:46509882 synonymous SNV . 0 11 hm5C_associated_SNPs_35000 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr7 6631381 6631381 1 + C T SKCM 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT TAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT < 41bp 1 0.154569717838597 1 0.19147065281868 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631381 synonymous SNV . 0 1 hm5C_associated_SNPs_35001 0 0 6 ELAVL1 POSTAR2 GSE29780,GSM738185 chr7:6631360-6631383
64251 chr19 40883707 40883707 1 + C T SKCM 40883722 + 40883702 40883742 41 GTGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGC GTGGTTCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGC < 41bp 1 0.485108675866191 1 0.35788506269455 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883722 chr19:40883707 synonymous SNV . 0 6 hm5C_associated_SNPs_35002 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:40883700-40883720
64251 chr19 40883707 40883707 1 + C T SKCM 40883723 + 40883703 40883743 41 TGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGCC TGGTTCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGCC < 41bp 1 0.33188790355235 1 0.48746532201767 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883723 chr19:40883707 synonymous SNV . 0 5 hm5C_associated_SNPs_35003 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:40883700-40883720
64251 chr22 35783096 35783096 1 + C T SKCM 35783079 + 35783059 35783099 41 ACCAAGTTCAAGCAGCTCTACCGCTCCCGCATGAACTCCCT ACCAAGTTCAAGCAGCTCTACCGCTCCCGCATGAACTTCCT < 41bp 1 0.144101662688718 1 0.112682223320007 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783079 chr22:35783096 nonsynonymous SNV 0.990 3 38 hm5C_associated_SNPs_35004 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr12 56347546 56347546 1 + G T SKCM 56347561 + 56347541 56347581 41 TTCTTGAGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC TTCTTTAGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC < 41bp 1 0.235724130332258 1 0.057699054479599 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKA ENSG00000065357 CDS Human protein_coding chr12:56347561 chr12:56347546 nonsynonymous SNV 0.567 1 6 hm5C_associated_SNPs_35005 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56347534-56347557
64251 chr19 42839511 42839511 1 + G A SKCM 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTCGTCCTATACAACTTCTCCGCCAACACCTGGAAGTCTT < 41bp 1 0.0961372477937991 1 0.244496077299118 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839511 nonsynonymous SNV 0.889 2 35 hm5C_associated_SNPs_35006 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42839488-42839512
64251 chr16 14970238 14970238 1 + C T SKCM 14970220 + 14970200 14970240 41 TTTCTTCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGA TTTCTTCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATTGA < 41bp 1 0.270446021872222 1 0.13329228758812 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14970220 chr16:14970238 synonymous SNV . 0 39 hm5C_associated_SNPs_35011 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:14970234-14970272
64251 chr16 14970238 14970238 1 + C T SKCM 14970225 + 14970205 14970245 41 TCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGAGATCC TCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATTGAGATCC < 41bp 1 0.603480570225473 1 0.7672199010849 experiment 0.793038859549055 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14970225 chr16:14970238 synonymous SNV . 0 34 hm5C_associated_SNPs_35012 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:14970234-14970272
64251 chr17 1747873 1747873 1 + T G SKCM 1747884 + 1747864 1747904 41 GTTTTCAGCTTTCATGTTGGCGACACAGTTGAACCCTCTCG GTTTTCAGCGTTCATGTTGGCGACACAGTTGAACCCTCTCG < 41bp 1 0.640939514908297 1 0.176349282264709 experiment 0.718120970183407 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPA1 ENSG00000132383 CDS Human protein_coding chr17:1747884 chr17:1747873 synonymous SNV . 0 10 hm5C_associated_SNPs_35013 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:1747839-1747877
64251 chr16 31087723 31087723 1 + C T SKCM 31087730 + 31087710 31087750 41 AGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAAC AGCTCTCTCGGCATCGAGAACTGCTCCATCCATCTCCCAAC < 41bp 1 0.311412028347814 1 0.222746223211288 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31087730 chr16:31087723 synonymous SNV . 0 14 hm5C_associated_SNPs_35014 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:31087720-31087752
64251 chr6 32123528 32123528 1 + C T SKCM 32123537 + 32123517 32123557 41 TTCTTTCATCTCCCTCTCCTCTCCACAGATGGGACAGTATG TTCTTTCATCTTCCTCTCCTCTCCACAGATGGGACAGTATG < 41bp 1 0.633382160442263 1 0.934066534042358 experiment 0.733235679115474 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control PPT2 ENSG00000221988;ENSG00000258388 CDS Human other chr6:32123537 chr6:32123528 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_35021 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:32123498-32123531
64251 chr3 33183916 33183916 1 + C T SKCM 33183934 + 33183914 33183954 41 CTCTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA CTTTTGGAACTGGAGGAGACCAGCTAGCCCACAGCAACCAA < 41bp 1 0.468231158448168 1 0.128020584583282 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CRTAP ENSG00000170275 CDS Human protein_coding chr3:33183934 chr3:33183916 synonymous SNV . 0 3 hm5C_associated_SNPs_35022 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:33183900-33183920
64251 chr3 47041780 47041780 1 + C T SKCM 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCGCCACTGGATGGGCCGCGGCCTTTTCCTGCTGCTC < 41bp 1 0.346132209248652 1 0.356560587882996 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041780 synonymous SNV . 0 28 hm5C_associated_SNPs_35023 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:47041779-47041780
64251 chr15 43668794 43668794 1 + C T SKCM 43668796 + 43668776 43668816 41 TCTGTTTTGCAGCCTTATCGCCAAGCACTGCTTGATTTGGA TCTGTTTTGCAGCCTTATTGCCAAGCACTGCTTGATTTGGA < 41bp 1 0.256310217606827 1 0.576678991317749 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43668796 chr15:43668794 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_35026 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:43668745-43668819
64251 chr11 65824782 65824782 1 + C T SKCM 65824781 + 65824761 65824801 41 GCCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCC GCCCCACTCCTACAGTTTTGCTCATGGGAGCCCCTGTTCCC < 41bp 1 0.65480140015583 1 0.0873859822750092 experiment 0.69039719968834 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824781 chr11:65824782 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_35027 0 0 8 DDX3X POSTAR2 ENCODE chr11:65824770-65824837
64251 chr18 13056630 13056630 1 + T A SKCM 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT ACCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT < 41bp 1 0.118954213832498 1 0.297754287719727 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056630 nonsynonymous SNV 0.037 0 1 hm5C_associated_SNPs_35029 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr1 109806907 109806907 1 + C G SKCM 109806891 + 109806871 109806911 41 AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCA AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTGTGCA < 41bp 1 0.0389997861100306 1 0.0759551227092743 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806891 chr1:109806907 nonsynonymous SNV 0.793 1 37 hm5C_associated_SNPs_35030 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806907 109806907 1 + C G SKCM 109806892 + 109806872 109806912 41 GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCAC GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTGTGCAC < 41bp 1 0.1708418894714 1 0.428240358829498 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806892 chr1:109806907 nonsynonymous SNV 0.793 1 36 hm5C_associated_SNPs_35031 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806907 109806907 1 + C G SKCM 109806893 + 109806873 109806913 41 AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACC AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTGTGCACC < 41bp 1 0.222947974995634 1 0.238129705190659 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806893 chr1:109806907 nonsynonymous SNV 0.793 1 35 hm5C_associated_SNPs_35032 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806907 109806907 1 + C G SKCM 109806894 + 109806874 109806914 41 GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCT GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTGTGCACCT < 41bp 1 0.135525698585975 1 0.42741721868515 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806894 chr1:109806907 nonsynonymous SNV 0.793 1 34 hm5C_associated_SNPs_35033 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806907 109806907 1 + C G SKCM 109806895 + 109806875 109806915 41 CAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCTG CAGAGGGCAACCTGGGCCCCCGGCTGCATGGTGTGCACCTG < 41bp 1 0.26656008670213 1 0.502279460430145 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806895 chr1:109806907 nonsynonymous SNV 0.793 1 33 hm5C_associated_SNPs_35034 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr8 77619807 77619807 1 + C T SKCM 77619825 + 77619805 77619845 41 TCCGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC TCTGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC < 41bp 1 0.246495634067456 1 0.598444283008575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77619825 chr8:77619807 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_35035 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:77619801-77619830
64251 chr18 12718630 12718630 1 + C T SKCM 12718624 + 12718604 12718644 41 CATATCAGCGTAATGATCTGCAGCTTCGTAGGTATGTTTCT CATATCAGCGTAATGATCTGCAGCTTTGTAGGTATGTTTCT < 41bp 1 0.473384554977033 1 0.285904586315155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718624 chr18:12718630 nonsynonymous SNV 0.943 0 27 hm5C_associated_SNPs_35038 0 0 1 PRPF8 POSTAR2 ENCODE chr18:12718622-12718671
64251 chr11 74329644 74329644 1 + C T SKCM 74329626 + 74329606 74329646 41 TGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCA TGCCGTCCCTAGAGCTCCTGCTGAATCCTCTTCGTCTTTCA < 41bp 1 0.662644062033491 1 0.248652756214142 experiment 0.674711875933018 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329626 chr11:74329644 nonsynonymous SNV 0.987 0 39 hm5C_associated_SNPs_35039 0 0 1 UCHL5 POSTAR2 ENCODE chr11:74329643-74329742
64251 chr11 74329644 74329644 1 + C T SKCM 74329633 + 74329613 74329653 41 CCTAGAGCTCCTGCTGAATCCTCTTCGTCTTCCAAAAAGTT CCTAGAGCTCCTGCTGAATCCTCTTCGTCTTTCAAAAAGTT < 41bp 1 0.153809337144241 1 0.0938304960727692 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329633 chr11:74329644 nonsynonymous SNV 0.987 0 32 hm5C_associated_SNPs_35040 0 0 1 UCHL5 POSTAR2 ENCODE chr11:74329643-74329742
64251 chr11 74329644 74329644 1 + C T SKCM 74329645 + 74329625 74329665 41 GCTGAATCCTCTTCGTCTTCCAAAAAGTTTGAGCAGTCACA GCTGAATCCTCTTCGTCTTTCAAAAAGTTTGAGCAGTCACA < 41bp 1 0.520514959890076 1 0.415853947401047 experiment 0.958970080219849 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329645 chr11:74329644 nonsynonymous SNV 0.987 0 20 hm5C_associated_SNPs_35041 0 0 1 UCHL5 POSTAR2 ENCODE chr11:74329643-74329742
64251 chr11 70275245 70275245 1 + G A SKCM 70275262 + 70275242 70275282 41 GGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG GGAAAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG < 41bp 1 0.42407747689841 1 0.368834108114243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275262 chr11:70275245 synonymous SNV . 0 4 hm5C_associated_SNPs_35043 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:70275240-70275260
64251 chr11 70275245 70275245 1 + G A SKCM 70275263 + 70275243 70275283 41 GAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGA GAAAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGA < 41bp 1 0.796185864682861 1 0.851010203361511 experiment 0.407628270634278 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275263 chr11:70275245 synonymous SNV . 0 3 hm5C_associated_SNPs_35044 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:70275240-70275260
64251 chr22 32241015 32241015 1 + C T SKCM 32241034 + 32241014 32241054 41 TCCCTGAAGTTCTGGAGGACCCGCTTCCTGCTGCTGCCAGC TTCCTGAAGTTCTGGAGGACCCGCTTCCTGCTGCTGCCAGC < 41bp 1 0.285033422786394 1 0.11973911523819 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32241034 chr22:32241015 nonsynonymous SNV 0.991 4 2 hm5C_associated_SNPs_35046 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:32241006-32241032
64251 chr19 42880626 42880626 1 + C T SKCM 42880609 + 42880589 42880629 41 CCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACCCAT CCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACTCAT < 41bp 1 0.215757662664521 1 0.720882296562195 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42880609 chr19:42880626 nonsynonymous SNV 0.998 0 38 hm5C_associated_SNPs_35047 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:42880614-42880639
64251 chr5 65349733 65349733 1 + C T SKCM 65349718 + 65349698 65349738 41 AAAGCACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGTT AAAGCACTGAAGATCTCTCCCCTCAGAAAAGTGGTTCAGTT < 41bp 1 0.231689365999377 1 0.141365528106689 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349718 chr5:65349733 nonsynonymous SNV 0.913 3 36 hm5C_associated_SNPs_35051 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349720-65349740
64251 chr5 65349733 65349733 1 + C T SKCM 65349721 + 65349701 65349741 41 GCACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGTTGGA GCACTGAAGATCTCTCCCCTCAGAAAAGTGGTTCAGTTGGA < 41bp 1 0.581719104990309 1 0.889339208602905 experiment 0.836561790019383 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349721 chr5:65349733 nonsynonymous SNV 0.913 3 33 hm5C_associated_SNPs_35052 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349720-65349740
64251 chr5 65349733 65349733 1 + C T SKCM 65349734 + 65349714 65349754 41 CTCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTGAAAT CTCCCCTCAGAAAAGTGGTTCAGTTGGATCTGTTGTGAAAT < 41bp 1 0.0859031913437833 1 0.0790905654430389 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349734 chr5:65349733 nonsynonymous SNV 0.913 3 20 hm5C_associated_SNPs_35053 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349720-65349740
64251 chr17 1648489 1648489 1 + G A SKCM 1648475 + 1648455 1648495 41 CCCTTTCTCCACAGTTCTCCCCTGTGAGCGCCATGGAGCCC CCCTTTCTCCACAGTTCTCCCCTGTGAGCGCCATAGAGCCC < 41bp 1 0.120824881281477 1 0.0561139285564423 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1648475 chr17:1648489 nonsynonymous SNV 0.029 1 35 hm5C_associated_SNPs_35054 0 0 5 DDX3X POSTAR2 ENCODE chr17:1648474-1648508
64251 chr19 17322820 17322820 1 + C T SKCM 17322803 + 17322783 17322823 41 AAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGACCCCCC AAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGACCTCCC < 41bp 1 0.169093383657815 1 0.279147863388062 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322803 chr19:17322820 nonsynonymous SNV 0.991 2 38 hm5C_associated_SNPs_35055 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:17322816-17322839
64251 chr8 48883186 48883186 1 + C T SKCM 48883170 + 48883150 48883190 41 ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTTCCAG < 41bp 1 0.251555165219836 1 0.175814270973206 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883170 chr8:48883186 nonsynonymous SNV 0.998 4 37 hm5C_associated_SNPs_35056 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr8:48883174-48883209
64251 chr1 155255641 155255641 1 + G C SKCM 155255657 + 155255637 155255677 41 TCTCGTGGTGCGTGAGGGCTCCGTGGGGAGGAAGATGTACT TCTCCTGGTGCGTGAGGGCTCCGTGGGGAGGAAGATGTACT < 41bp 1 0.302386310884168 1 0.287759900093079 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HCN3 ENSG00000143630 CDS Human protein_coding chr1:155255657 chr1:155255641 nonsynonymous SNV 0.902 3 5 hm5C_associated_SNPs_35057 0 0 1 PPIG POSTAR2 ENCODE chr1:155255615-155255656
64251 chr19 42848898 42848898 1 + C T SKCM 42848907 + 42848887 42848927 41 TTCGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT TTCGTCACGTCTCTGGAGGCCTGCGTCACCCAGAGCTTCCT < 41bp 1 0.271886264999266 1 0.303104251623154 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848907 chr19:42848898 synonymous SNV . 0 12 hm5C_associated_SNPs_35059 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42848867-42848905
64251 chr16 30976366 30976366 1 + C T SKCM 30976360 + 30976340 30976380 41 GGCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAA GGCCTCCTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAA < 41bp 1 0.110702469445153 1 0.0841494500637054 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976360 chr16:30976366 nonsynonymous SNV 0.947 2 27 hm5C_associated_SNPs_35060 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976366 30976366 1 + C T SKCM 30976361 + 30976341 30976381 41 GCCTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAAC GCCTCCTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAAC < 41bp 1 0.220310221308642 1 0.0231173038482666 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976361 chr16:30976366 nonsynonymous SNV 0.947 2 26 hm5C_associated_SNPs_35061 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976366 30976366 1 + C T SKCM 30976363 + 30976343 30976383 41 CTCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCT CTCCTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAACCT < 41bp 1 0.0567688848286941 1 0.0399086475372314 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976363 chr16:30976366 nonsynonymous SNV 0.947 2 24 hm5C_associated_SNPs_35062 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976366 30976366 1 + C T SKCM 30976364 + 30976344 30976384 41 TCCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTG TCCTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAACCTG < 41bp 1 0.139246477426659 1 0.272528171539307 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976364 chr16:30976366 nonsynonymous SNV 0.947 2 23 hm5C_associated_SNPs_35063 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976366 30976366 1 + C T SKCM 30976365 + 30976345 30976385 41 CCTGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGG CCTGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAACCTGG < 41bp 1 0.688772973130436 1 0.548563301563263 experiment 0.622454053739128 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976365 chr16:30976366 nonsynonymous SNV 0.947 2 22 hm5C_associated_SNPs_35064 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr16 30976366 30976366 1 + C T SKCM 30976367 + 30976347 30976387 41 TGCCTCAGAGGCTCCACCCCCGGAGCCTCCAGAACCTGGTG TGCCTCAGAGGCTCCACCCTCGGAGCCTCCAGAACCTGGTG < 41bp 1 0.567609476942029 1 0.931490659713745 experiment 0.864781046115943 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976367 chr16:30976366 nonsynonymous SNV 0.947 2 20 hm5C_associated_SNPs_35065 0 0 1 TBRG4 POSTAR2 ENCODE chr16:30976358-30976400
64251 chr5 141353267 141353267 1 + C T SKCM 141353260 + 141353240 141353280 41 GTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGC GTCTGTCCAAGGTGGAGAAACCAGGATTTATTTGGATTTGC < 41bp 1 0.545820345902935 1 0.109068363904953 experiment 0.908359308194129 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141353260 chr5:141353267 synonymous SNV . 0 28 hm5C_associated_SNPs_35066 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:141353258-141353300
64251 chr6 44107307 44107307 1 + G A SKCM 44107298 + 44107278 44107318 41 TGCTGGTGGTTGTGGGCGTCCTCTCCGTAGGCATCGTGCTG TGCTGGTGGTTGTGGGCGTCCTCTCCGTAAGCATCGTGCTG < 41bp 1 0.346268613215924 1 0.156663924455643 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44107298 chr6:44107307 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_35067 0 0 1 SND1 POSTAR2 ENCODE chr6:44107279-44107316
64251 chr19 35741388 35741388 1 + C T SKCM 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCTCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA < 41bp 1 0.527618372051746 1 0.464501619338989 experiment 0.944763255896508 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741388 nonsynonymous SNV 0.175 2 3 hm5C_associated_SNPs_35068 0 0 2 RBM15 POSTAR2 ENCODE chr19:35741353-35741400
64251 chr1 25679448 25679448 1 + G A SKCM 25679441 + 25679421 25679461 41 TGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCT TGATTGCATCTATGTGGATTCTTTTTGAAGGTTATGTTGCT < 41bp 1 0.0807212106978821 1 0.0228175520896912 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25679441 chr1:25679448 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_35069 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25679370-25679462
64251 chr11 130013310 130013310 1 + C T SKCM 130013308 + 130013288 130013328 41 AGAACCATGGCTATGAGAACCCCACCTACAAATACCTGGAG AGAACCATGGCTATGAGAACCCTACCTACAAATACCTGGAG < 41bp 1 0.0508060069822396 1 0.518036723136902 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130013308 chr11:130013310 synonymous SNV . 0 23 hm5C_associated_SNPs_35070 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:130013255-130013323
64251 chr12 49663387 49663387 1 + C T SKCM 49663396 + 49663376 49663416 41 AGGAGATGATTCCTTCAACACCTTCTTCAGTGAAACGGGTG AGGAGATGATTTCTTCAACACCTTCTTCAGTGAAACGGGTG < 41bp 1 0.0368109467171888 1 0.0350474119186401 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49663396 chr12:49663387 nonsynonymous SNV 0.997 3 12 hm5C_associated_SNPs_35071 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:49663362-49663449
64251 chr2 207174998 207174998 1 + C T SKCM 207175003 + 207174983 207175023 41 GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA GTGGCCTTAGATAAATCATGCCATCGTCATCCTCCAGCAGA < 41bp 1 0.0434770250398174 1 0.0249637961387634 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175003 chr2:207174998 nonsynonymous SNV 0.205 0 16 hm5C_associated_SNPs_35073 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:207174980-207175000
64251 chr2 207174998 207174998 1 + C T SKCM 207175004 + 207174984 207175024 41 TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG TGGCCTTAGATAAATCATGCCATCGTCATCCTCCAGCAGAG < 41bp 1 0.25811674422558 1 0.100204795598984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175004 chr2:207174998 nonsynonymous SNV 0.205 0 15 hm5C_associated_SNPs_35074 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:207174980-207175000
64251 chr17 7490757 7490757 1 + C T SKCM 7490756 + 7490736 7490776 41 GCAACCAGGAAACCGGAGATCCCCTGATGGCTGGGACCTTT GCAACCAGGAAACCGGAGATCTCCTGATGGCTGGGACCTTT < 41bp 1 0.625533618983062 1 0.206520408391953 experiment 0.748932762033875 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7490756 chr17:7490757 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_35075 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:7490744-7490771
64251 chr5 176524637 176524637 1 + G A SKCM 176524624 + 176524604 176524644 41 ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGC ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGAATCCAGC < 41bp 1 0.124213177560473 1 0.110180377960205 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524624 chr5:176524637 nonsynonymous SNV 0.042 1 34 hm5C_associated_SNPs_35076 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr5 176524637 176524637 1 + G A SKCM 176524627 + 176524607 176524647 41 CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC CTGTCTTCAGCCACGACCCCCTGCCATTGGAATCCAGCTCC < 41bp 1 0.336017036521619 1 0.0446194708347321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524627 chr5:176524637 nonsynonymous SNV 0.042 1 31 hm5C_associated_SNPs_35077 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr1 233482327 233482327 1 + G A SKCM 233482335 + 233482315 233482355 41 GGCCCCCGAAGTGATCAAGTCTTCCTTGTTTTCTAAGGGAA GGCCCCCGAAGTAATCAAGTCTTCCTTGTTTTCTAAGGGAA < 41bp 1 0.113359890762031 1 0.0777270197868347 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233482335 chr1:233482327 synonymous SNV . 0 13 hm5C_associated_SNPs_35078 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233482327-233482358
64251 chr15 48626681 48626681 1 + C T SKCM 48626680 + 48626660 48626700 41 ACGGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAG ACGGACATTCAGATAGCGCTCTCTTCTGGGTGTTATGGAAG < 41bp 1 0.26023148278378 1 0.0589902997016907 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626680 chr15:48626681 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_35079 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:48626659-48626690
64251 chr15 48626681 48626681 1 + C T SKCM 48626682 + 48626662 48626702 41 GGACATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAG GGACATTCAGATAGCGCTCTCTTCTGGGTGTTATGGAAGAG < 41bp 1 0.259332555761963 1 0.0674889981746674 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626682 chr15:48626681 nonsynonymous SNV 0.981 4 20 hm5C_associated_SNPs_35080 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:48626659-48626690
64251 chr15 48626681 48626681 1 + C T SKCM 48626685 + 48626665 48626705 41 CATTCAGATAGCGCTCCCTTCTGGGTGTTATGGAAGAGTGG CATTCAGATAGCGCTCTCTTCTGGGTGTTATGGAAGAGTGG < 41bp 1 0.778269277510526 1 0.794447898864746 experiment 0.443461444978948 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DUT ENSG00000128951 CDS Human protein_coding chr15:48626685 chr15:48626681 nonsynonymous SNV 0.981 4 17 hm5C_associated_SNPs_35081 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:48626659-48626690
64251 chr2 183622485 183622485 1 + G A SKCM 183622482 + 183622462 183622502 41 AGTATCATTCTTTTTGTGCCCAGGAAAACGTTCAAAGATAC AGTATCATTCTTTTTGTGCCCAGAAAAACGTTCAAAGATAC < 41bp 1 0.650346700256144 1 0.589644432067871 experiment 0.699306599487712 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183622482 chr2:183622485 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_35082 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:183622485-183622506
64251 chr7 127228564 127228564 1 + C T SKCM 127228572 + 127228552 127228592 41 CATGGGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCG CATGGGCCTCACTGTGTCCGCGCTCTTTTCGCGGATCTTCG < 41bp 1 0.267138058597112 1 0.0915883183479309 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228572 chr7:127228564 synonymous SNV . 0 13 hm5C_associated_SNPs_35083 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr7 127228564 127228564 1 + C T SKCM 127228574 + 127228554 127228594 41 TGGGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCGGG TGGGCCTCACTGTGTCCGCGCTCTTTTCGCGGATCTTCGGG < 41bp 1 0.32980675185684 1 0.136837095022202 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228574 chr7:127228564 synonymous SNV . 0 11 hm5C_associated_SNPs_35084 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr7 127228564 127228564 1 + C T SKCM 127228576 + 127228556 127228596 41 GGCCTCACCGTGTCCGCGCTCTTTTCGCGGATCTTCGGGAA GGCCTCACTGTGTCCGCGCTCTTTTCGCGGATCTTCGGGAA < 41bp 1 0.358493178401112 1 0.154471457004547 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228576 chr7:127228564 synonymous SNV . 0 9 hm5C_associated_SNPs_35085 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr7 2613102 2613102 1 + G A SKCM 2613101 + 2613081 2613121 41 GAAAAAGAAGATATGTATGACGAGATTATTGAGTTAAAGAA GAAAAAGAAGATATGTATGACAAGATTATTGAGTTAAAGAA < 41bp 1 0.435731531563687 1 0.380600273609161 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IQCE ENSG00000106012 CDS Human protein_coding chr7:2613101 chr7:2613102 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_35086 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:2613090-2613114
64251 chr16 90028531 90028531 1 + C T SKCM 90028519 + 90028499 90028539 41 TGTTCAGCTACGTGGAGGAGCTGGTGGAGATTCGCGTGAGG TGTTCAGCTACGTGGAGGAGCTGGTGGAGATTTGCGTGAGG < 41bp 1 0.642370071917948 1 0.323983609676361 experiment 0.715259856164104 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028519 chr16:90028531 nonsynonymous SNV 0.995 4 33 hm5C_associated_SNPs_35087 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:90028513-90028542
64251 chr7 100777090 100777090 1 + C T SKCM 100777083 + 100777063 100777103 41 CTTATGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATT CTTATGAAAAAGAGGTGCCTCTCTCTGTCCTCACCAACATT < 41bp 1 0.120991816781819 1 0.0999838709831238 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777083 chr7:100777090 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_35089 0 0 2 RPS3 POSTAR2 ENCODE chr7:100777072-100777116
64251 chr7 100777090 100777090 1 + C T SKCM 100777087 + 100777067 100777107 41 TGAAAAAGAGGTGCCTCTCTCTGCCCTCACCAACATTCTGA TGAAAAAGAGGTGCCTCTCTCTGTCCTCACCAACATTCTGA < 41bp 1 0.287931107404178 1 0.307365030050278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100777087 chr7:100777090 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_35090 0 0 2 RPS3 POSTAR2 ENCODE chr7:100777072-100777116
64251 chr3 49049425 49049425 1 + C T SKCM 49049444 + 49049424 49049464 41 CCCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT CTCTGCACAGACAGGTGCACCCTCTCTTCAGCCTGCCTGAT < 41bp 1 0.0478999467316718 1 0.0518608391284943 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049444 chr3:49049425 nonsynonymous SNV 0.993 0 2 hm5C_associated_SNPs_35091 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:49049373-49049425
64251 chr7 36438862 36438862 1 + C T SKCM 36438880 + 36438860 36438900 41 TTCTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAG TTTTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAG < 41bp 1 0.683395225090475 1 0.374639689922333 experiment 0.633209549819049 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438880 chr7:36438862 nonsynonymous SNV 0.008 1 3 hm5C_associated_SNPs_35092 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:36438854-36438879
64251 chr7 36438862 36438862 1 + C T SKCM 36438882 + 36438862 36438902 41 CTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAGGG TTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAGGG < 41bp 1 0.775543050964993 1 0.15813547372818 experiment 0.448913898070014 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438882 chr7:36438862 nonsynonymous SNV 0.008 1 1 hm5C_associated_SNPs_35093 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:36438854-36438879
64251 chr6 138202176 138202176 1 + C T SKCM 138202184 + 138202164 138202204 41 CCACTCAGAGATCGAGCCAGCGCAGAGATGTGCCTCGAACC CCACTCAGAGATTGAGCCAGCGCAGAGATGTGCCTCGAACC < 41bp 1 0.365176399898178 1 0.319567143917084 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138202184 chr6:138202176 nonsynonymous SNV 0.975 0 13 hm5C_associated_SNPs_35096 0 0 3 BUD13 POSTAR2 ENCODE chr6:138202153-138202263
64251 chr2 74438352 74438352 1 + C T SKCM 74438349 + 74438329 74438369 41 ATGCCACTGTTACAATATCTCATCGATATACTCCCAAAGAG ATGCCACTGTTACAATATCTCATTGATATACTCCCAAAGAG < 41bp 1 0.230158166367017 1 0.346586912870407 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74438349 chr2:74438352 stopgain 0.998 1 24 hm5C_associated_SNPs_35097 0 0 28 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr2:74438320-74438360
64251 chr2 47221620 47221620 1 + C T SKCM 47221605 + 47221585 47221625 41 CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGCCCTGC CATGGGCAAGGAGGAGAGTTCTTTCGCCACTCAGGTCCTGC < 41bp 1 0.0646103040026117 1 0.0183766782283783 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221605 chr2:47221620 nonsynonymous SNV 0.805 0 36 hm5C_associated_SNPs_35098 0 0 2 DDX24 POSTAR2 ENCODE chr2:47221575-47221646
64251 chr2 15770985 15770985 1 + C T SKCM 15770972 + 15770952 15770992 41 GGCTGCCCTTGAAAAGGAGGCGCAGACATCTTTCCTGCATC GGCTGCCCTTGAAAAGGAGGCGCAGACATCTTTTCTGCATC < 41bp 1 0.534724266093747 1 0.233651667833328 experiment 0.930551467812506 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770972 chr2:15770985 synonymous SNV . 0 34 hm5C_associated_SNPs_35099 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:15770976-15771002
64251 chr2 15770985 15770985 1 + C T SKCM 15770974 + 15770954 15770994 41 CTGCCCTTGAAAAGGAGGCGCAGACATCTTTCCTGCATCTT CTGCCCTTGAAAAGGAGGCGCAGACATCTTTTCTGCATCTT < 41bp 1 0.225910380344006 1 0.434975147247314 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770974 chr2:15770985 synonymous SNV . 0 32 hm5C_associated_SNPs_35100 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:15770976-15771002
64251 chr19 14580207 14580207 1 + C T SKCM 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCAGTGCGGGACACCCCTTTCTGGTGAACCTCTTC < 41bp 1 0.0618734381048598 1 0.0742099285125732 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580207 synonymous SNV . 0 26 hm5C_associated_SNPs_35101 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr19 14580207 14580207 1 + C T SKCM 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCAGTGCGGGACACCCCTTTCTGGTGAACCTCTTCG < 41bp 1 0.0295476054855985 1 0.033863365650177 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580207 synonymous SNV . 0 25 hm5C_associated_SNPs_35102 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:14580183-14580219
64251 chr15 76630250 76630250 1 + G A SKCM 76630260 + 76630240 76630280 41 GTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGACGGGA GTACCTGGACAAGACGTGCACGTGCTTCGTGAGAGACGGGA < 41bp 1 0.289568883530362 1 0.365214228630066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630260 chr15:76630250 nonsynonymous SNV 0.999 5 11 hm5C_associated_SNPs_35106 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630220-76630260
64251 chr19 1036119 1036119 1 + C T SKCM 1036125 + 1036105 1036145 41 TCCCGGCCCCTTTCCCTCACCCAGGCCAAGACTAAGGGGCT TCCCGGCCCCTTTCTCTCACCCAGGCCAAGACTAAGGGGCT < 41bp 1 0.30148998535007 1 0.680326461791992 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036125 chr19:1036119 synonymous SNV . 0 15 hm5C_associated_SNPs_35109 0 0 1 DHX30 POSTAR2 ENCODE chr19:1036086-1036126
64251 chr8 48883187 48883187 1 + C T SKCM 48883170 + 48883150 48883190 41 ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCTCAG < 41bp 1 0.259272285327016 1 0.256895840167999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883170 chr8:48883187 synonymous SNV . 0 38 hm5C_associated_SNPs_35120 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr8:48883174-48883209
64251 chr2 101598822 101598822 1 + C T SKCM 101598827 + 101598807 101598847 41 CAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGTGATCCC CAGCTCTGCCTGGTCTAGGACTCCAACGTCCAGGTGATCCC < 41bp 1 0.721533796860567 1 0.971371293067932 experiment 0.556932406278866 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101598827 chr2:101598822 stopgain 1.000 1 16 hm5C_associated_SNPs_35122 0 0 5 GRWD1 POSTAR2 ENCODE chr2:101598707-101598877
64251 chr17 6920628 6920628 1 + C T SKCM 6920637 + 6920617 6920657 41 GATCCTCCTCTCCTCTCCTGCTGAGCCTTCCACCTCTGACC GATCCTCCTCTTCTCTCCTGCTGAGCCTTCCACCTCTGACC < 41bp 1 0.458112273345424 1 0.210938632488251 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C17orf49 ENSG00000161939;ENSG00000258315 CDS Human other chr17:6920637 chr17:6920628 synonymous SNV . 0 12 hm5C_associated_SNPs_35127 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:6920593-6920631
64251 chr12 69651668 69651668 1 + C T SKCM 69651667 + 69651647 69651687 41 GGCCAGCAGGACCAGGAGGGCCACCCCCACCTTTTCCAGGT GGCCAGCAGGACCAGGAGGGCTACCCCCACCTTTTCCAGGT < 41bp 1 0.354202429574833 1 0.209392428398132 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69651667 chr12:69651668 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_35128 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:69651511-69651671
64251 chr19 50906833 50906833 1 + C T SKCM 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTACCTCATTTCTCGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.078237191910981 1 0.197129189968109 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906833 synonymous SNV . 0 11 hm5C_associated_SNPs_35130 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr19 50906833 50906833 1 + C T SKCM 50906851 + 50906831 50906871 41 ATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT ATTTCTCGGGCCCAGACCCTCAAGGTGAGGGCTGGGCAGGT < 41bp 1 0.700757904528739 1 0.888521373271942 experiment 0.598484190942522 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906851 chr19:50906833 synonymous SNV . 0 3 hm5C_associated_SNPs_35131 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr14 72152246 72152246 1 + C T SKCM 72152244 + 72152224 72152264 41 CAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA CAGGTGCAGAGTCCCATGACCTTGCGGCTGAATGCTGGAAA < 41bp 1 0.212292723895097 1 0.102172553539276 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152244 chr14:72152246 nonsynonymous SNV 0.894 1 23 hm5C_associated_SNPs_35134 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chr1 22835087 22835087 1 + T C SKCM 22835072 + 22835052 22835092 41 TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGTTCTAG TGGTTCAGGTGGTTTCAATTCTCTGATATCAGCAGCTCTAG < 41bp 1 0.501215285675547 1 0.737247288227081 experiment 0.997569428648906 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835072 chr1:22835087 nonsynonymous SNV 0.998 0 36 hm5C_associated_SNPs_35135 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:22835041-22835088
64251 chr2 54845318 54845318 1 + T C SKCM 54845324 + 54845304 54845344 41 GCCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGG GCCTCACTAAACTGCTGGACCCCGAAGGTAGGGACTCAAGG < 41bp 1 0.289048580415258 1 0.108641266822815 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845324 chr2:54845318 synonymous SNV . 0 15 hm5C_associated_SNPs_35142 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845318 54845318 1 + T C SKCM 54845325 + 54845305 54845345 41 CCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGG CCTCACTAAACTGCTGGACCCCGAAGGTAGGGACTCAAGGG < 41bp 1 0.285666142491531 1 0.220187783241272 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845325 chr2:54845318 synonymous SNV . 0 14 hm5C_associated_SNPs_35143 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845318 54845318 1 + T C SKCM 54845326 + 54845306 54845346 41 CTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGGA CTCACTAAACTGCTGGACCCCGAAGGTAGGGACTCAAGGGA < 41bp 1 0.320198572166899 1 0.758610248565674 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845326 chr2:54845318 synonymous SNV . 0 13 hm5C_associated_SNPs_35144 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr17 54912440 54912440 1 + A C SKCM 54912447 + 54912427 54912467 41 GGGCTCCGCGTGGACGAGGGCTGCCTCAGGAAGGCCGACAA GGGCTCCGCGTGGCCGAGGGCTGCCTCAGGAAGGCCGACAA < 41bp 1 0.685604590902694 1 0.405606150627136 experiment 0.628790818194612 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912447 chr17:54912440 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_35145 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:54912439-54912440
64251 chr12 132546845 132546845 1 + C T SKCM 132546853 + 132546833 132546873 41 CCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGGTAAA CCCCGGCACGGTTTTTGGTGCCCCAAGTGTCCCAAGGTAAA < 41bp 1 0.122433521395014 1 0.0963898897171021 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546853 chr12:132546845 nonsynonymous SNV 0.614 5 13 hm5C_associated_SNPs_35157 0 0 4 DDX24 POSTAR2 ENCODE chr12:132546832-132546867
64251 chr19 12924217 12924217 1 + C T SKCM 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT CTACTTCCTCAATGAAGGGTCCCAAGCTCGTCCCCGTTCTT < 41bp 1 0.322105692593551 1 0.0826056897640228 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924217 synonymous SNV . 0 28 hm5C_associated_SNPs_35158 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924217 12924217 1 + C T SKCM 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCTCGTCCCCGTTCTTC < 41bp 1 0.135028641269365 1 0.0377197265625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924217 synonymous SNV . 0 27 hm5C_associated_SNPs_35159 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924217 12924217 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCTCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG < 41bp 1 0.166333506100408 1 0.0951819717884064 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924217 synonymous SNV . 0 6 hm5C_associated_SNPs_35160 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924218 12924218 1 + C T SKCM 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT CTACTTCCTCAATGAAGGGTCCCAAGCCTGTCCCCGTTCTT < 41bp 1 0.321175424484864 1 0.0702271163463593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924218 nonsynonymous SNV 0.002 1 29 hm5C_associated_SNPs_35161 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924218 12924218 1 + C T SKCM 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCCTGTCCCCGTTCTTC < 41bp 1 0.0980488581060191 1 0.0597066879272461 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924218 nonsynonymous SNV 0.002 1 28 hm5C_associated_SNPs_35162 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924218 12924218 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCTGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG < 41bp 1 0.145706753870154 1 0.0981582701206207 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924218 nonsynonymous SNV 0.002 1 7 hm5C_associated_SNPs_35163 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr16 1550438 1550438 1 + C T SKCM 1550440 + 1550420 1550460 41 CACGTCAGCAAGGCTGTCCTCATCTGCCTGGCGCAACTCGG CACGTCAGCAAGGCTGTCTTCATCTGCCTGGCGCAACTCGG < 41bp 1 0.308625637103377 1 0.0632083117961884 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550440 chr16:1550438 nonsynonymous SNV 0.164 4 19 hm5C_associated_SNPs_35164 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr16:1550396-1550454
64251 chr6 31594924 31594924 1 + C T SKCM 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCTCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.300570782291602 1 0.119478106498718 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594924 synonymous SNV . 0 6 hm5C_associated_SNPs_35165 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594924 31594924 1 + C T SKCM 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCTCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.284828456763857 1 0.156838983297348 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594924 synonymous SNV . 0 5 hm5C_associated_SNPs_35166 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594924 31594924 1 + C T SKCM 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCTCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.337706823282104 1 0.16583713889122 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594924 synonymous SNV . 0 4 hm5C_associated_SNPs_35167 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594924 31594924 1 + C T SKCM 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCTCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.587103631491606 1 0.537136375904083 experiment 0.825792737016788 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594924 synonymous SNV . 0 3 hm5C_associated_SNPs_35168 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr4 79173594 79173594 1 + C T SKCM 79173606 + 79173586 79173626 41 CTTGCAATCATGGGGAAGTCCGATGTACCCCCCAACCATGC CTTGCAATTATGGGGAAGTCCGATGTACCCCCCAACCATGC < 41bp 1 0.197916737551106 1 0.541032135486603 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79173606 chr4:79173594 nonsynonymous SNV 0.043 0 9 hm5C_associated_SNPs_35169 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79173578-79173601
64251 chr7 154738110 154738110 1 - C T SKCM 154738116 - 154738096 154738136 41 GATGTTCACAATGCAGAGTTCGTTCTGACTGGAGTGCTCAC GATGTTCACAATGCAGAGTTCGTTCTAACTGGAGTGCTCAC < 41bp 1 0.0546614663399854 1 0.0356373190879822 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAXIP1 ENSG00000157212 CDS Human protein_coding chr7:154738116 chr7:154738110 synonymous SNV . 0 27 hm5C_associated_SNPs_35170 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:154738079-154738119
64251 chr17 37681082 37681082 1 + C A SKCM 37681077 + 37681057 37681097 41 ACTGAGCCTGTGAAGAACAGCAGCCCAGCACCACCTCAGCC ACTGAGCCTGTGAAGAACAGCAGCCAAGCACCACCTCAGCC < 41bp 1 0.422626183029779 1 0.325722634792328 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37681077 chr17:37681082 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_35171 0 0 4 GRWD1 POSTAR2 ENCODE chr17:37681009-37681097
64251 chr6 31594925 31594925 1 + C T SKCM 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCCTCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.288411007675472 1 0.0872040390968323 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594925 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_35172 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594925 31594925 1 + C T SKCM 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCCTCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.283754846559995 1 0.1861552298069 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594925 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_35173 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594925 31594925 1 + C T SKCM 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCCTCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.342050213502506 1 0.2342449426651 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594925 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_35174 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594925 31594925 1 + C T SKCM 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCCTCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.582532168938697 1 0.527479767799377 experiment 0.834935662122605 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594925 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_35175 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr1 60302572 60302572 1 + C T SKCM 60302568 + 60302548 60302588 41 ATGAGTAAAGAAATATTGAGCTCTCCTCCAAATGATGCTGT ATGAGTAAAGAAATATTGAGCTCTTCTCCAAATGATGCTGT < 41bp 1 0.0936986347478828 1 0.0472326278686523 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60302568 chr1:60302572 nonsynonymous SNV 0.265 0 25 hm5C_associated_SNPs_35178 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:60302567-60302590
64251 chr6 130381225 130381225 1 + G A SKCM 130381222 + 130381202 130381242 41 AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGA AAAAATGGATTCAAAGTTGGCATAAAATTAGAAGGCGTGGA < 41bp 1 0.288275317685485 1 0.272339701652527 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381222 chr6:130381225 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_35179 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr2 231931703 231931703 1 + T A SKCM 231931688 + 231931668 231931708 41 TGCCTGAAGGAGAAAAAAAACCAATTGACCAGAGATTGGAA TGCCTGAAGGAGAAAAAAAACCAATTGACCAGAGAATGGAA < 41bp 1 0.191934711963603 1 0.182340443134308 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931688 chr2:231931703 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_35180 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr2 231931703 231931703 1 + T A SKCM 231931696 + 231931676 231931716 41 GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATCGT GGAGAAAAAAAACCAATTGACCAGAGAATGGAAGGCATCGT < 41bp 1 0.599578721612009 1 0.0880196690559387 experiment 0.800842556775982 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931696 chr2:231931703 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_35181 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr7 128407644 128407644 1 + C T SKCM 128407640 + 128407620 128407660 41 GAAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCA GAAGAGACCAAAGACTGGATCCTTTCCTCAGACTATGATCA < 41bp 1 0.0293083980664873 1 0.0195875465869904 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407640 chr7:128407644 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_35182 0 0 23 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr7 128407644 128407644 1 + C T SKCM 128407641 + 128407621 128407661 41 AAGAGACCAAAGACTGGATCCTTCCCTCAGACTATGATCAT AAGAGACCAAAGACTGGATCCTTTCCTCAGACTATGATCAT < 41bp 1 0.0704253815872425 1 0.0285425782203674 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CALU ENSG00000128595 CDS Human protein_coding chr7:128407641 chr7:128407644 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_35183 0 0 23 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:128407640-128407660
64251 chr11 61897297 61897297 1 + C A SKCM 61897299 + 61897279 61897319 41 AGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT AGCCAGCTGAGCTCCCGAAGCCTCCGCAGCAAGGACAGTGT < 41bp 1 0.0506371378093571 1 0.343448281288147 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897299 chr11:61897297 nonsynonymous SNV 0.797 0 19 hm5C_associated_SNPs_35187 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr12 110771024 110771024 1 + A G SKCM 110771014 + 110770994 110771034 41 ATGATAAACCAGTGAATTGTCACCAGTATGATGGTCTGGTA ATGATAAACCAGTGAATTGTCACCAGTATGGTGGTCTGGTA < 41bp 1 0.791571485492058 1 0.412213504314423 experiment 0.416857029015883 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110771014 chr12:110771024 nonsynonymous SNV 0.971 3 31 hm5C_associated_SNPs_35188 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110770980-110771040
64251 chr21 46900420 46900420 1 + C T SKCM 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTTCGGGGGCGATTTGGAGGCCCTGCGGGT < 41bp 1 0.0536451362664877 1 0.122714310884476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900420 synonymous SNV . 0 25 hm5C_associated_SNPs_35197 0 0 7 FMR1 POSTAR2 ENCODE chr21:46900396-46900434
64251 chr10 95660969 95660969 1 + G A SKCM 95660981 + 95660961 95661001 41 CTGTATTAGGAGAGTGGAGTCTGCCTTACTGTGGGTTGGAC CTGTATTAAGAGAGTGGAGTCTGCCTTACTGTGGGTTGGAC < 41bp 1 0.442916627290449 1 0.157601296901703 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660981 chr10:95660969 nonsynonymous SNV 0.718 2 9 hm5C_associated_SNPs_35201 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:95660948-95660974
64251 chr7 77256323 77256323 1 + C T SKCM 77256319 + 77256299 77256339 41 AGTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAA AGTTTTGAGATTAAGAAGGTCCCTTTCCAAGAGGGACCAAA < 41bp 1 0.0473449397077937 1 0.0139486491680145 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256319 chr7:77256323 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_35202 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256323 77256323 1 + C T SKCM 77256320 + 77256300 77256340 41 GTTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAA GTTTTGAGATTAAGAAGGTCCCTTTCCAAGAGGGACCAAAA < 41bp 1 0.0136672540689479 1 0.0294181406497955 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256320 chr7:77256323 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_35203 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256323 77256323 1 + C T SKCM 77256321 + 77256301 77256341 41 TTTTGAGATTAAGAAGGTCCCTCTCCAAGAGGGACCAAAAA TTTTGAGATTAAGAAGGTCCCTTTCCAAGAGGGACCAAAAA < 41bp 1 0.0431789106087756 1 0.072371631860733 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256321 chr7:77256323 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_35204 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256323 77256323 1 + C T SKCM 77256335 + 77256315 77256355 41 AGGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC AGGTCCCTTTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC < 41bp 1 0.100330982941904 1 0.393960326910019 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256335 chr7:77256323 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_35205 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr7 77256323 77256323 1 + C T SKCM 77256336 + 77256316 77256356 41 GGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA GGTCCCTTTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA < 41bp 1 0.268499332388614 1 0.519036710262299 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256336 chr7:77256323 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_35206 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:77256316-77256337
64251 chr3 14487283 14487283 1 + C T SKCM 14487265 + 14487245 14487285 41 TTTATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTT TTTATTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTTTT < 41bp 1 0.199662200977918 1 0.356796115636826 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487265 chr3:14487283 synonymous SNV . 0 39 hm5C_associated_SNPs_35207 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:14487280-14487300
64251 chr3 14487283 14487283 1 + C T SKCM 14487269 + 14487249 14487289 41 TTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTCTTGGAG TTTTCCTGTTTGGGAGCGGCCTGCCTGTGTTTTTTTTGGAG < 41bp 1 0.304125549525585 1 0.267167538404465 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14487269 chr3:14487283 synonymous SNV . 0 35 hm5C_associated_SNPs_35208 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:14487280-14487300
64251 chr16 5128005 5128005 1 + C T SKCM 5128001 + 5127981 5128021 41 ATGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA ATGAAGCTGGGCAGCATGCACTCTTCGTTCAGGGCCCGGTA < 41bp 1 0.438604017045412 1 0.0533750355243683 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128001 chr16:5128005 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_35209 0 0 2 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr1 10381867 10381867 1 + C A SKCM 10381855 + 10381835 10381875 41 ACTTCATTACGGGACTTACTCTGGGGCAATGCCGTGTACCT ACTTCATTACGGGACTTACTCTGGGGCAATGCAGTGTACCT < 41bp 1 0.756739964858943 1 0.947256088256836 experiment 0.486520070282114 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10381855 chr1:10381867 synonymous SNV . 0 33 hm5C_associated_SNPs_35210 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:10381839-10381898
64251 chr11 57577669 57577669 1 + G A SKCM 57577685 + 57577665 57577705 41 AAAAGAAGGATGGAAGAAATCAGACTTTCAGGTATAGTAAC AAAAAAAGGATGGAAGAAATCAGACTTTCAGGTATAGTAAC < 41bp 1 0.469553550030562 1 0.473852783441544 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57577685 chr11:57577669 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_35211 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57577629-57577690
64251 chr8 17406292 17406292 1 + G A SKCM 17406301 + 17406281 17406321 41 GTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAG GTTTGTGAAAGAAAATGTGGCAAACTGGAAGATTAGTGAAG < 41bp 1 0.145982809824776 1 0.113377422094345 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17406301 chr8:17406292 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_35212 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:17406285-17406312
64251 chr8 132968066 132968066 1 + T A SKCM 132968077 + 132968057 132968097 41 AGAGAATCCTGCTGTGCTGGCTGAAAACTGTTTCAGAGAAC AGAGAATCCAGCTGTGCTGGCTGAAAACTGTTTCAGAGAAC < 41bp 1 0.715398691274222 1 0.440450668334961 experiment 0.569202617451557 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFR3A ENSG00000132294 CDS Human protein_coding chr8:132968077 chr8:132968066 synonymous SNV . 0 10 hm5C_associated_SNPs_35213 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:132968048-132968084
64251 chr13 53216577 53216577 1 + C A SKCM 53216566 + 53216546 53216586 41 TATCTAAGATCTCTGGTGGACTTTTTCTGCCCGTGGACGCC TATCTAAGATCTCTGGTGGACTTTTTCTGCCAGTGGACGCC < 41bp 1 0.22101986659974 1 0.0374245941638947 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HNRNPA1L2 ENSG00000139675 UTR5 Human protein_coding chr13:53216566 chr13:53216577 . . 0 32 hm5C_associated_SNPs_35214 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:53216560-53216580
64251 chr12 67699410 67699410 1 + C T SKCM 67699418 + 67699398 67699438 41 AGGGGTTCCTATCCTTGCTTCATTTCTTAGAAAAAACCAGA AGGGGTTCCTATTCTTGCTTCATTTCTTAGAAAAAACCAGA < 41bp 1 0.0304504700375604 1 0.0965085327625275 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699418 chr12:67699410 synonymous SNV . 0 13 hm5C_associated_SNPs_35215 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:67699347-67699412
64251 chr12 67699411 67699411 1 + C T SKCM 67699418 + 67699398 67699438 41 AGGGGTTCCTATCCTTGCTTCATTTCTTAGAAAAAACCAGA AGGGGTTCCTATCTTTGCTTCATTTCTTAGAAAAAACCAGA < 41bp 1 0.0300378905657878 1 0.0669116377830505 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699418 chr12:67699411 nonsynonymous SNV 0.998 4 14 hm5C_associated_SNPs_35216 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:67699347-67699412
64251 chr1 44134855 44134855 1 + C T SKCM 44134847 + 44134827 44134867 41 AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTG AGGAGGTGAGTCAGAGTGAGCTCTTCCCTAAGGAGGATCTG < 41bp 1 0.240252098693413 1 0.0237171947956085 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134847 chr1:44134855 synonymous SNV . 0 29 hm5C_associated_SNPs_35217 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr1 44134854 44134854 1 + C T SKCM 44134847 + 44134827 44134867 41 AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTG AGGAGGTGAGTCAGAGTGAGCTCTTCCTCAAGGAGGATCTG < 41bp 1 0.239238583107895 1 0.018243283033371 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134847 chr1:44134854 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_35218 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr11 64803007 64803007 1 + C T SKCM 64803026 + 64803006 64803046 41 TCCAGCCCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTG TTCAGCCCTGCCCAGGAGGCCCTGGATCTCCTCTTTAACTG < 41bp 1 0.262798098200237 1 0.0799706876277924 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64803026 chr11:64803007 nonsynonymous SNV 0.992 1 2 hm5C_associated_SNPs_35219 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:64803000-64803038
64251 chr1 183086480 183086480 1 + G A SKCM 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGGATGGGTGGCGTGCGGAACAAAGAGATGGCTCTG < 41bp 1 0.733017776866835 1 0.899189531803131 experiment 0.533964446266331 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086480 synonymous SNV . 0 28 hm5C_associated_SNPs_35224 0 0 2 SND1 POSTAR2 ENCODE chr1:183086460-183086481
64251 chr16 30723167 30723167 1 + G A SKCM 30723169 + 30723149 30723189 41 CCTTTAGACTCTGTGGAGGACCGGAGTGAGGATGAGGAAGA CCTTTAGACTCTGTGGAGAACCGGAGTGAGGATGAGGAAGA < 41bp 1 0.533950097323714 1 0.430123656988144 experiment 0.932099805352571 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30723169 chr16:30723167 nonsynonymous SNV 0.895 1 19 hm5C_associated_SNPs_35225 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:30723161-30723182
64251 chr12 2906432 2906432 1 + C T SKCM 2906431 + 2906411 2906451 41 GGATCGCAAGGACAAATTCTCCTTTGACCTGGGAAAAGGTA GGATCGCAAGGACAAATTCTCTTTTGACCTGGGAAAAGGTA < 41bp 1 0.111687795684597 1 0.0269874632358551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2906431 chr12:2906432 synonymous SNV . 0 22 hm5C_associated_SNPs_35226 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:2906329-2906433
64251 chr5 92923921 92923921 1 + C T SKCM 92923934 + 92923914 92923954 41 TACGCCTCACCTGGAGCGAGCTGTTCGTGCTCAACGCGGCC TACGCCTTACCTGGAGCGAGCTGTTCGTGCTCAACGCGGCC < 41bp 1 0.122170546531756 1 0.0722832083702087 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923934 chr5:92923921 synonymous SNV . 0 8 hm5C_associated_SNPs_35228 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr5:92923918-92923930
64251 chr16 89925708 89925708 1 + C T SKCM 89925700 + 89925680 89925720 41 CACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAG CACCCACCCCCCAGGAGGGACGGAGCCATCACGGCCCCGAG < 41bp 1 0.487285790072094 1 0.79151576757431 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925700 chr16:89925708 nonsynonymous SNV 0.001 0 29 hm5C_associated_SNPs_35229 0 0 3 PPIG POSTAR2 ENCODE chr16:89925611-89925710
64251 chr4 41262678 41262678 1 + G A SKCM 41262672 + 41262652 41262692 41 TTACATTCGCAGCATGAGAACTTCAGGAAAAAGCAGATTGA TTACATTCGCAGCATGAGAACTTCAGAAAAAAGCAGATTGA < 41bp 1 0.342095641499789 1 0.220401644706726 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41262672 chr4:41262678 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_35230 0 0 12 SRSF1 POSTAR2 GSE83923,GSM2221663 chr4:41262660-41262680
64251 chr7 128852122 128852122 1 + C T SKCM 128852114 + 128852094 128852134 41 GGACTCTTGCCGACAGGGAGCGTGGACCCTGGTCTCCAACC GGACTCTTGCCGACAGGGAGCGTGGACCTTGGTCTCCAACC < 41bp 1 0.431674473836602 1 0.36265030503273 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMO ENSG00000128602 CDS Human protein_coding chr7:128852114 chr7:128852122 synonymous SNV . 0 29 hm5C_associated_SNPs_35231 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:128852121-128852122
64251 chr16 90028230 90028230 1 + C T SKCM 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACGACCTGGCTGTGATTCCTGCACGCGTTGTACACAAC < 41bp 1 0.143524295089724 1 0.210751324892044 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028230 synonymous SNV . 0 20 hm5C_associated_SNPs_35232 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90028216-90028246
64251 chr9 107521434 107521434 1 + C T SKCM 107521450 + 107521430 107521470 41 GGATCCCAGAGTTGTGGCAGCTGGTAAGCTGTTTGACTAGG GGATTCCAGAGTTGTGGCAGCTGGTAAGCTGTTTGACTAGG < 41bp 1 0.5772759020946 1 0.269079208374023 experiment 0.8454481958108 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107521450 chr9:107521434 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_35233 0 0 1 RPS3 POSTAR2 ENCODE chr9:107521418-107521458
64251 chr11 65271256 65271256 1 + G A SKCM 65271236 + 65271216 65271256 41 CACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACG CACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACA < 41bp 1 0.721796393196103 1 0.669220566749573 experiment 0.556407213607794 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271236 chr11:65271256 . . 0 41 hm5C_associated_SNPs_35234 0 0 88 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr11 65271256 65271256 1 + G A SKCM 65271247 + 65271227 65271267 41 GGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT GGACCAGATCAGGATTTGAGCGGAAGAACAAATGTAACTTT < 41bp 1 0.781788069740101 1 0.719161629676819 experiment 0.436423860519799 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271247 chr11:65271256 . . 0 30 hm5C_associated_SNPs_35235 0 0 88 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr11 65271256 65271256 1 + G A SKCM 65271255 + 65271235 65271275 41 TCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGG TCAGGATTTGAGCGGAAGAACAAATGTAACTTTAAGGCAGG < 41bp 1 0.385505739822591 1 0.484336584806442 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271255 chr11:65271256 . . 0 22 hm5C_associated_SNPs_35236 0 0 88 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271100-65271300
64251 chr19 1084263 1084263 1 + G A SKCM 1084244 + 1084224 1084264 41 TCTGCACTTGCAGGACGAGTCATCCAACCAGCGAGCTGAGG TCTGCACTTGCAGGACGAGTCATCCAACCAGCGAGCTGAAG < 41bp 1 0.0842509207341848 1 0.0674426555633545 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1084244 chr19:1084263 synonymous SNV . 0 40 hm5C_associated_SNPs_35237 0 0 2 DDX24 POSTAR2 ENCODE chr19:1084261-1084331
64251 chr5 131976454 131976454 1 + C T SKCM 131976460 + 131976440 131976480 41 AGCCAACAACAAATCTTGACCGAGAAAACATTGAATCTCTT AGCCAACAACAAATTTTGACCGAGAAAACATTGAATCTCTT < 41bp 1 0.625530271025487 1 0.523445308208466 experiment 0.748939457949025 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131976460 chr5:131976454 nonsynonymous SNV 0.977 3 15 hm5C_associated_SNPs_35239 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131976416-131976492
64251 chr22 42273324 42273324 1 + C T SKCM 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTTCTTTAACCCCCTGACTTCCCTGCTGCAG < 41bp 1 0.240424836351746 1 0.036128044128418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273324 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_35252 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:42273289-42273332
64251 chr11 46400029 46400029 1 + C T SKCM 46400025 + 46400005 46400045 41 AGGTGAAGAGCTGATTGAGGCTGCCAAGAGGAACGACTTCT AGGTGAAGAGCTGATTGAGGCTGCTAAGAGGAACGACTTCT < 41bp 1 0.220931009867245 1 0.130657404661179 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46400025 chr11:46400029 synonymous SNV . 0 25 hm5C_associated_SNPs_35253 0 0 2 DDX24 POSTAR2 ENCODE chr11:46400006-46400066
64251 chr11 46400029 46400029 1 + C T SKCM 46400038 + 46400018 46400058 41 ATTGAGGCTGCCAAGAGGAACGACTTCTGTAAGGTACTAGC ATTGAGGCTGCTAAGAGGAACGACTTCTGTAAGGTACTAGC < 41bp 1 0.151999881275354 1 0.308357715606689 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46400038 chr11:46400029 synonymous SNV . 0 12 hm5C_associated_SNPs_35254 0 0 2 DDX24 POSTAR2 ENCODE chr11:46400006-46400066
64251 chr17 17049365 17049365 1 + T A SKCM 17049376 + 17049356 17049396 41 CTGCTGAATTTCAAGAAAGGCTGGCTGACTAAGCAGTATGA CTGCTGAATATCAAGAAAGGCTGGCTGACTAAGCAGTATGA < 41bp 1 0.162395618185632 1 0.23163765668869 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17049376 chr17:17049365 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_35255 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:17049360-17049380
64251 chr19 1440440 1440440 1 + C T SKCM 1440441 + 1440421 1440461 41 TCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTAA TCGGGGCCACCCACTCCTCTCGCTTCATCCCTCTCAAGTAA < 41bp 1 0.359542855697842 1 0.272263824939728 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440441 chr19:1440440 synonymous SNV . 0 20 hm5C_associated_SNPs_35257 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr20 18529286 18529286 1 + C T SKCM 18529305 + 18529285 18529325 41 TCAAGTGTTTAACAACAGTCCTGATGAGTCGTCATATTACA TTAAGTGTTTAACAACAGTCCTGATGAGTCGTCATATTACA < 41bp 1 0.197290251896931 1 0.0349871516227722 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC23B ENSG00000101310 CDS Human protein_coding chr20:18529305 chr20:18529286 stopgain 0.994 1 2 hm5C_associated_SNPs_35258 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:18529272-18529302
64251 chr19 40718847 40718847 1 + C T SKCM 40718840 + 40718820 40718860 41 AGAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAG AGAAGGGACGAACGTGGGGGCCCAGCTTCACCCTGCAGAAG < 41bp 1 0.0796925013829044 1 0.153538286685944 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718840 chr19:40718847 nonsynonymous SNV 0.975 4 28 hm5C_associated_SNPs_35260 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718847 40718847 1 + C T SKCM 40718841 + 40718821 40718861 41 GAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGG GAAGGGACGAACGTGGGGGCCCAGCTTCACCCTGCAGAAGG < 41bp 1 0.101131702456769 1 0.111550897359848 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718841 chr19:40718847 nonsynonymous SNV 0.975 4 27 hm5C_associated_SNPs_35261 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718847 40718847 1 + C T SKCM 40718842 + 40718822 40718862 41 AAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGGA AAGGGACGAACGTGGGGGCCCAGCTTCACCCTGCAGAAGGA < 41bp 1 0.209750223195833 1 0.187563806772232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718842 chr19:40718847 nonsynonymous SNV 0.975 4 26 hm5C_associated_SNPs_35262 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr8 25168014 25168014 1 + C T SKCM 25168004 + 25167984 25168024 41 ACACTTGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG ACACTTGGTTGATAGATCAACAGCAATAGCTCGGAAGATGG < 41bp 1 0.515472060223843 1 0.188619554042816 experiment 0.969055879552314 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25168004 chr8:25168014 synonymous SNV . 0 31 hm5C_associated_SNPs_35263 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:25167998-25168019
64251 chr9 131105503 131105503 1 + T C SKCM 131105522 + 131105502 131105542 41 TTCCTCTACTTGGGATCTGGCGGCTGGCGCTTCATCCGGGT TCCCTCTACTTGGGATCTGGCGGCTGGCGCTTCATCCGGGT < 41bp 1 0.625409999101098 1 0.785299479961395 experiment 0.749180001797805 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131105522 chr9:131105503 nonsynonymous SNV 0.988 0 2 hm5C_associated_SNPs_35264 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:131105498-131105539
64251 chr5 112176283 112176283 1 + C T SKCM 112176287 + 112176267 112176307 41 ATCTAACAATCGAATCCCCTCCAAATGAGTTAGCTGCTGGA ATCTAACAATCGAATCTCCTCCAAATGAGTTAGCTGCTGGA < 41bp 1 0.131828601597257 1 0.612512588500977 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APC ENSG00000134982 CDS Human protein_coding chr5:112176287 chr5:112176283 synonymous SNV . 0 17 hm5C_associated_SNPs_35266 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112176283-112176312
64251 chr5 112176283 112176283 1 + C T SKCM 112176300 + 112176280 112176320 41 ATCCCCTCCAAATGAGTTAGCTGCTGGAGAAGGAGTTAGAG ATCTCCTCCAAATGAGTTAGCTGCTGGAGAAGGAGTTAGAG < 41bp 1 0.280299294634205 1 0.198678582906723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APC ENSG00000134982 CDS Human protein_coding chr5:112176300 chr5:112176283 synonymous SNV . 0 4 hm5C_associated_SNPs_35267 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:112176283-112176312
64251 chr5 33463897 33463897 1 + A C SKCM 33463905 + 33463885 33463925 41 AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCC AATGGTAGTTCCCGTGGGACCAACCTGTGATGAATATGCCC < 41bp 1 0.348919331232273 1 0.426869451999664 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33463905 chr5:33463897 synonymous SNV . 0 13 hm5C_associated_SNPs_35268 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:33463860-33463900
64251 chr9 135947060 135947060 1 + C T SKCM 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCTTGTGCC < 41bp 1 0.707564594371285 1 0.838617086410522 experiment 0.584870811257429 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947060 nonsynonymous SNV 0.001 1 35 hm5C_associated_SNPs_35269 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr1 40724014 40724014 1 + T G SKCM 40724018 + 40723998 40724038 41 ATCTTCGGGGCCGTGCTGCTCTTTTCCTGGACAGTGTATCT ATCTTCGGGGCCGTGCGGCTCTTTTCCTGGACAGTGTATCT < 41bp 1 0.176601088391612 1 0.0177543163299561 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40724018 chr1:40724014 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_35270 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:40723996-40724015
64251 chr11 6629302 6629302 1 + A T SKCM 6629293 + 6629273 6629313 41 AAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC AAGGGACGATCATGGCTTCTCCCCCTTGCTCTGGGCCTGCC < 41bp 1 0.236341215957441 1 0.280775129795074 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629293 chr11:6629302 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_35271 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr11 6629302 6629302 1 + A T SKCM 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGACGATCATGGCTTCTCCCCCTTGCTCTGGGCCTGCCG < 41bp 1 0.198068763360355 1 0.0744930505752563 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629302 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_35272 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr19 757067 757067 1 + A G SKCM 757057 + 757037 757077 41 TACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGG TACCATCTGGTGTGCATGGGCCCCGAGGCCGGCGGCTGGGG < 41bp 1 0.308066997416805 1 0.111590534448624 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757057 chr19:757067 nonsynonymous SNV 0.022 0 31 hm5C_associated_SNPs_35273 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757067 757067 1 + A G SKCM 757058 + 757038 757078 41 ACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGC ACCATCTGGTGTGCATGGGCCCCGAGGCCGGCGGCTGGGGC < 41bp 1 0.588164095005953 1 0.482728600502014 experiment 0.823671809988093 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757058 chr19:757067 nonsynonymous SNV 0.022 0 30 hm5C_associated_SNPs_35274 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757067 757067 1 + A G SKCM 757059 + 757039 757079 41 CCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCC CCATCTGGTGTGCATGGGCCCCGAGGCCGGCGGCTGGGGCC < 41bp 1 0.44776199543199 1 0.304780602455139 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757059 chr19:757067 nonsynonymous SNV 0.022 0 29 hm5C_associated_SNPs_35275 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757067 757067 1 + A G SKCM 757060 + 757040 757080 41 CATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCA CATCTGGTGTGCATGGGCCCCGAGGCCGGCGGCTGGGGCCA < 41bp 1 0.754261088655933 1 0.734854459762573 experiment 0.491477822688134 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757060 chr19:757067 nonsynonymous SNV 0.022 0 28 hm5C_associated_SNPs_35276 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr10 43882357 43882357 1 - T G SKCM 43882365 - 43882345 43882385 41 AGTCCATATTGAGATTGGCCCAGATGGAAGAGTGACGGGTG AGTCCATATTGAGATTGGCCCAGATGGACGAGTGACGGGTG < 41bp 1 0.566544152708893 1 0.36660560965538 experiment 0.866911694582214 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882365 chr10:43882357 synonymous SNV . 0 29 hm5C_associated_SNPs_35277 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:43882229-43882392
64251 chr10 43882357 43882357 1 - T G SKCM 43882366 - 43882346 43882386 41 GAGTCCATATTGAGATTGGCCCAGATGGAAGAGTGACGGGT GAGTCCATATTGAGATTGGCCCAGATGGACGAGTGACGGGT < 41bp 1 0.515322848020908 1 0.282254457473755 experiment 0.969354303958184 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882366 chr10:43882357 synonymous SNV . 0 30 hm5C_associated_SNPs_35278 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:43882229-43882392
64251 chr14 77580486 77580486 1 + A G SKCM 77580491 + 77580471 77580511 41 AGGAGTTGATTCGTCAGAATCAGGCAACTCAGGTAGAACTA AGGAGTTGATTCGTCGGAATCAGGCAACTCAGGTAGAACTA < 41bp 1 0.723713596067504 1 0.886343240737915 experiment 0.552572807864991 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CIPC ENSG00000198894 CDS Human protein_coding chr14:77580491 chr14:77580486 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_35279 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:77580471-77580527
64251 chr12 109547664 109547664 1 + C T SKCM 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TACAGACGGCTCATTCCTCCCCTTTGTCAGTGTATAGAGGG < 41bp 1 0.0430506972583937 1 0.0343689322471619 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547664 nonsynonymous SNV 0.938 4 15 hm5C_associated_SNPs_35281 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr17 53014034 53014034 1 + T G SKCM 53014053 + 53014033 53014073 41 TTTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA TGTTGGAGCAAAATAAGAACCAGAAGGAAGCCACCAATGTA < 41bp 1 0.696610541358972 1 0.688609182834625 experiment 0.606778917282056 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014053 chr17:53014034 nonsynonymous SNV 0.996 0 2 hm5C_associated_SNPs_35282 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:53014007-53014039
64251 chr19 7620634 7620634 1 + C T SKCM 7620645 + 7620625 7620665 41 GCAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA GCAGCGGGCTCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA < 41bp 1 0.262010107168434 1 0.541321337223053 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620645 chr19:7620634 synonymous SNV . 0 10 hm5C_associated_SNPs_35283 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr19 7620634 7620634 1 + C T SKCM 7620646 + 7620626 7620666 41 CAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG CAGCGGGCTCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG < 41bp 1 0.493453902586862 1 0.748051583766937 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620646 chr19:7620634 synonymous SNV . 0 9 hm5C_associated_SNPs_35284 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr6 7572239 7572239 1 + A C SKCM 7572244 + 7572224 7572264 41 AGGATGACTCTCAAAAACCTCCCTCTAGCAGACCAGGGATC AGGATGACTCTCAAACACCTCCCTCTAGCAGACCAGGGATC < 41bp 1 0.0353638678539101 1 0.141133308410645 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572244 chr6:7572239 nonsynonymous SNV 0.705 0 16 hm5C_associated_SNPs_35285 0 0 6 FXR1 POSTAR2 GSE39682,GSM977619 chr6:7572229-7572251
64251 chr11 6629303 6629303 1 + C T SKCM 6629293 + 6629273 6629313 41 AAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC AAGGGACGATCATGGCTTCTCCCCCTTGCATTGGGCCTGCC < 41bp 1 0.216602911412555 1 0.115522682666779 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629293 chr11:6629303 synonymous SNV . 0 31 hm5C_associated_SNPs_35286 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr11 6629303 6629303 1 + C T SKCM 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGACGATCATGGCTTCTCCCCCTTGCATTGGGCCTGCCG < 41bp 1 0.173355048235657 1 0.0767934322357178 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629303 synonymous SNV . 0 30 hm5C_associated_SNPs_35287 0 0 3 BUD13 POSTAR2 ENCODE chr11:6629292-6629337
64251 chr5 38885522 38885522 1 + C T SKCM 38885507 + 38885487 38885527 41 CCGAGGACTTCAAGACTTTGCACTGTACTTGGGATCCTGGG CCGAGGACTTCAAGACTTTGCACTGTACTTGGGATTCTGGG < 41bp 1 0.31995559452101 1 0.0681895613670349 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OSMR ENSG00000145623 CDS Human protein_coding chr5:38885507 chr5:38885522 nonsynonymous SNV 0.811 3 36 hm5C_associated_SNPs_35288 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:38885511-38885581
64251 chr2 101611999 101611999 1 + C T SKCM 101612019 + 101611999 101612039 41 CAGCAGTCTGTCTGAGTCGTCAGGCCTCCAGCAGCCGCCCC TAGCAGTCTGTCTGAGTCGTCAGGCCTCCAGCAGCCGCCCC < 41bp 1 0.717043318963057 1 0.963697195053101 experiment 0.565913362073886 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101612019 chr2:101611999 synonymous SNV . 0 1 hm5C_associated_SNPs_35289 0 0 1 HNRNPK POSTAR2 ENCODE chr2:101611946-101612013
64251 chr4 3174747 3174747 1 + C T SKCM 3174757 + 3174737 3174777 41 AGTGTGAGGCCAGGCTTGTACCACTACTGCTTCATGGCCCC AGTGTGAGGCTAGGCTTGTACCACTACTGCTTCATGGCCCC < 41bp 1 0.176891836381965 1 0.411152333021164 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3174757 chr4:3174747 nonsynonymous SNV 0.996 4 11 hm5C_associated_SNPs_35290 0 0 2 FMR1 POSTAR2 ENCODE chr4:3174719-3174821
64251 chr20 39741499 39741499 1 + A T SKCM 39741484 + 39741464 39741504 41 AAAAAATGTGTGGACAAGATCCGGAACCAGTATCGAGAAGA AAAAAATGTGTGGACAAGATCCGGAACCAGTATCGTGAAGA < 41bp 1 0.758867293905338 1 0.272453665733337 experiment 0.482265412189325 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741484 chr20:39741499 synonymous SNV . 0 36 hm5C_associated_SNPs_35291 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39741466-39741505
64251 chr6 42561953 42561953 1 + T G SKCM 42561936 + 42561916 42561956 41 ATTTTTTTCCAAGATGACAACATCAGGAGGTGGAGGTTTCT ATTTTTTTCCAAGATGACAACATCAGGAGGTGGAGGTGTCT < 41bp 1 0.16697280475511 1 0.123243719339371 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBR2 ENSG00000024048 CDS Human protein_coding chr6:42561936 chr6:42561953 nonsynonymous SNV 0.998 3 38 hm5C_associated_SNPs_35293 0 0 13 LIN28A POSTAR2 GSE39873,GSM980594 chr6:42561940-42561960
64251 chr11 66249785 66249785 1 + C T SKCM 66249791 + 66249771 66249811 41 GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGC GCCTACCACCTGTCTCGTGCCGCCTGGTACGGAGGCCTGGC < 41bp 1 0.549957996479456 1 0.202246338129044 experiment 0.900084007041088 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249791 chr11:66249785 synonymous SNV . 0 15 hm5C_associated_SNPs_35294 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249785 66249785 1 + C T SKCM 66249793 + 66249773 66249813 41 CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTG CTACCACCTGTCTCGTGCCGCCTGGTACGGAGGCCTGGCTG < 41bp 1 0.355482601404793 1 0.0558768212795258 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249793 chr11:66249785 synonymous SNV . 0 13 hm5C_associated_SNPs_35295 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249785 66249785 1 + C T SKCM 66249794 + 66249774 66249814 41 TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTGT TACCACCTGTCTCGTGCCGCCTGGTACGGAGGCCTGGCTGT < 41bp 1 0.662984800715438 1 0.280359417200089 experiment 0.674030398569125 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249794 chr11:66249785 synonymous SNV . 0 12 hm5C_associated_SNPs_35296 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 47296655 47296655 1 + T C SKCM 47296654 + 47296634 47296674 41 ACTCTCAAGCGCCTGGTGGACTGCTGTAGTGAGCGCCTTCT ACTCTCAAGCGCCTGGTGGACCGCTGTAGTGAGCGCCTTCT < 41bp 1 0.305039282850464 1 0.1430624127388 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47296654 chr11:47296655 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_35297 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47296629-47296665
64251 chr6 161470210 161470210 1 + A G SKCM 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATATTATTAATGAAATCCTTACTTTCAAGGTCGACTAT < 41bp 1 0.0668648654789737 1 0.033067375421524 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470210 synonymous SNV . 0 32 hm5C_associated_SNPs_35300 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:161470193-161470220
64251 chr11 65347680 65347680 1 + T C SKCM 65347700 + 65347680 65347720 41 TGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCTGCGGGAGG CGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCTGCGGGAGG < 41bp 1 0.632631601174668 1 0.681084990501404 experiment 0.734736797650664 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65347700 chr11:65347680 synonymous SNV . 0 1 hm5C_associated_SNPs_35307 0 0 3 FMR1 POSTAR2 ENCODE chr11:65347668-65347709
64251 chr2 74328504 74328504 1 + T A SKCM 74328499 + 74328479 74328519 41 ACCTCGGCCTTGGCTGGGCCCAGCCTGACTGAGAAGCCGTG ACCTCGGCCTTGGCTGGGCCCAGCCAGACTGAGAAGCCGTG < 41bp 1 0.188219534800043 1 0.0675636827945709 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74328499 chr2:74328504 nonsynonymous SNV 0.975 1 26 hm5C_associated_SNPs_35308 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:74328501-74328552
64251 chr1 113238118 113238118 1 + C T SKCM 113238138 + 113238118 113238158 41 CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC TCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC < 41bp 1 0.0537672857294587 1 0.0459977686405182 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238138 chr1:113238118 synonymous SNV . 0 1 hm5C_associated_SNPs_35309 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr12 56075839 56075839 1 + C T SKCM 56075823 + 56075803 56075843 41 CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATCCCCA CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATTCCCA < 41bp 1 0.41861001720381 1 0.0705180764198303 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075823 chr12:56075839 nonsynonymous SNV 0.998 4 37 hm5C_associated_SNPs_35310 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr12:56075825-56075848
64251 chr1 113238119 113238119 1 + C T SKCM 113238138 + 113238118 113238158 41 CCGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC CTGGGTCCACCTTCCTAGCTCCATCTACCGCCTCCTGGCCC < 41bp 1 0.0496707064677229 1 0.0481998026371002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238138 chr1:113238119 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_35311 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr17 38152539 38152539 1 + C T SKCM 38152535 + 38152515 38152555 41 ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC ATTCCACCCGAGAGCCCCAGCTAGTCTTCCACCAGCGCATC < 41bp 1 0.422967174550758 1 0.0737082064151764 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38152535 chr17:38152539 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_35317 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38152518-38152546
64251 chr8 144732969 144732969 1 + C T SKCM 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACATCA < 41bp 1 0.523216244366046 1 0.120836973190308 experiment 0.953567511267908 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732969 synonymous SNV . 0 39 hm5C_associated_SNPs_35319 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:144732952-144732976
64251 chr5 10263303 10263303 1 + C T SKCM 10263299 + 10263279 10263319 41 TTTGCCGACGCACTGGAGGTCATCCCCATGGCCCTCTCTGA TTTGCCGACGCACTGGAGGTCATCTCCATGGCCCTCTCTGA < 41bp 1 0.167803257073485 1 0.13427060842514 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCT5 ENSG00000150753 CDS Human protein_coding chr5:10263299 chr5:10263303 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_35320 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:10263265-10263318
64251 chr13 77570195 77570195 1 + T A SKCM 77570189 + 77570169 77570209 41 TGGTGTAATCAAGGCGCTGCCTGCTTTTTTGAGGGAATTGA TGGTGTAATCAAGGCGCTGCCTGCTTATTTGAGGGAATTGA < 41bp 1 0.619993321180231 1 0.169852048158646 experiment 0.760013357639538 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570189 chr13:77570195 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_35321 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr13:77570178-77570245
64251 chr12 132589002 132589002 1 + C T SKCM 132588993 + 132588973 132589013 41 GCAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCC GCAGAATGTGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCC < 41bp 1 0.219881623480044 1 0.0674736797809601 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588993 chr12:132589002 nonsynonymous SNV 0.436 3 30 hm5C_associated_SNPs_35322 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132588994 + 132588974 132589014 41 CAGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCT CAGAATGTGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCT < 41bp 1 0.210737495412398 1 0.0624147951602936 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588994 chr12:132589002 nonsynonymous SNV 0.436 3 29 hm5C_associated_SNPs_35323 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132588995 + 132588975 132589015 41 AGAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTC AGAATGTGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCTC < 41bp 1 0.280775674812872 1 0.19547775387764 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588995 chr12:132589002 nonsynonymous SNV 0.436 3 28 hm5C_associated_SNPs_35324 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132588996 + 132588976 132589016 41 GAATGTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCT GAATGTGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCTCT < 41bp 1 0.580430074896735 1 0.428669631481171 experiment 0.839139850206529 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132588996 chr12:132589002 nonsynonymous SNV 0.436 3 27 hm5C_associated_SNPs_35325 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132589000 + 132588980 132589020 41 GTGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAG GTGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCTCTGCAG < 41bp 1 0.124963644191009 1 0.120837360620499 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589000 chr12:132589002 nonsynonymous SNV 0.436 3 23 hm5C_associated_SNPs_35326 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132589001 + 132588981 132589021 41 TGCGTGCAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGC TGCGTGCAGGTGCCCCTGGCCTTGGGCTGGGCCTCTGCAGC < 41bp 1 0.582547891642189 1 0.470126092433929 experiment 0.834904216715623 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589001 chr12:132589002 nonsynonymous SNV 0.436 3 22 hm5C_associated_SNPs_35327 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr12 132589002 132589002 1 + C T SKCM 132589007 + 132588987 132589027 41 CAGGTGCCCCTGGCCCTGGGCTGGGCCTCTGCAGCAGCAGC CAGGTGCCCCTGGCCTTGGGCTGGGCCTCTGCAGCAGCAGC < 41bp 1 0.610905022547003 1 0.463768512010574 experiment 0.778189954905993 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589007 chr12:132589002 nonsynonymous SNV 0.436 3 16 hm5C_associated_SNPs_35328 0 0 2 XRN2 POSTAR2 ENCODE chr12:132588988-132589060
64251 chr17 64785059 64785059 1 + G A SKCM 64785043 + 64785023 64785063 41 CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAA CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGAAGAA < 41bp 1 0.275194192293672 1 0.213401317596436 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785043 chr17:64785059 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_35330 0 0 1 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr17 64785059 64785059 1 + G A SKCM 64785046 + 64785026 64785066 41 GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAG GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGAAGAACAG < 41bp 1 0.565523788332249 1 0.551956653594971 experiment 0.868952423335501 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785046 chr17:64785059 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_35331 0 0 1 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr11 57574431 57574431 1 + C T SKCM 57574432 + 57574412 57574452 41 AAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC AAACGATACAGTGGATTTCTCTAAAAGAACGAGTCCAGCTC < 41bp 1 0.727937643763675 1 0.797238230705261 experiment 0.54412471247265 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57574432 chr11:57574431 nonsynonymous SNV 0.999 4 20 hm5C_associated_SNPs_35333 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:57574416-57574438
64251 chr14 64628973 64628973 1 + C T SKCM 64628971 + 64628951 64628991 41 ACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATA ACAACCTGGCAGAGATCCTGCCTCCAGCCCTGCAGGACATA < 41bp 1 0.0435307246381422 1 0.0632185935974121 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64628971 chr14:64628973 synonymous SNV . 0 23 hm5C_associated_SNPs_35334 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64628937-64628975
64251 chr17 74557740 74557740 1 + C T SKCM 74557758 + 74557738 74557778 41 TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT TCTCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT < 41bp 1 0.334271973105072 1 0.154445379972458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557758 chr17:74557740 . . 0 3 hm5C_associated_SNPs_35335 0 0 130 TARDBP POSTAR2 DRA001158,DRS012386 chr17:74557682-74557800
64251 chr17 4926874 4926874 1 + C T SKCM 4926871 + 4926851 4926891 41 ACCGCATGCCGTCAGCCCGGCCCCCCTCGCCACCACTGTCA ACCGCATGCCGTCAGCCCGGCCCTCCTCGCCACCACTGTCA < 41bp 1 0.0323388408381261 1 0.015949159860611 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926871 chr17:4926874 nonsynonymous SNV 0.029 0 24 hm5C_associated_SNPs_35336 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926874 4926874 1 + C T SKCM 4926880 + 4926860 4926900 41 CGTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAG CGTCAGCCCGGCCCTCCTCGCCACCACTGTCAAGCTGGGAG < 41bp 1 0.0912389651568241 1 0.107522189617157 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926880 chr17:4926874 nonsynonymous SNV 0.029 0 15 hm5C_associated_SNPs_35337 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926874 4926874 1 + C T SKCM 4926881 + 4926861 4926901 41 GTCAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGC GTCAGCCCGGCCCTCCTCGCCACCACTGTCAAGCTGGGAGC < 41bp 1 0.765365572090695 1 0.697788119316101 experiment 0.46926885581861 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926881 chr17:4926874 nonsynonymous SNV 0.029 0 14 hm5C_associated_SNPs_35338 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr17 4926874 4926874 1 + C T SKCM 4926883 + 4926863 4926903 41 CAGCCCGGCCCCCCTCGCCACCACTGTCAAGCTGGGAGCGG CAGCCCGGCCCTCCTCGCCACCACTGTCAAGCTGGGAGCGG < 41bp 1 0.132716061013645 1 0.0350755751132965 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926883 chr17:4926874 nonsynonymous SNV 0.029 0 12 hm5C_associated_SNPs_35339 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4926870-4926888
64251 chr22 41913586 41913586 1 + C T SKCM 41913571 + 41913551 41913591 41 ATGGGTGCAGAAATTGGGGCCACCACTTCCGTGTTCCCTTA ATGGGTGCAGAAATTGGGGCCACCACTTCCGTGTTTCCTTA < 41bp 1 0.562400812628737 1 0.396644055843353 experiment 0.875198374742527 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41913571 chr22:41913586 synonymous SNV . 0 36 hm5C_associated_SNPs_35340 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:41913579-41913614
64251 chr11 75508276 75508276 1 + C T SKCM 75508290 + 75508270 75508310 41 CATCATCGTGGTCGGGGGTGCGGCTGAGTCTCTGAGCTCCA CATCATTGTGGTCGGGGGTGCGGCTGAGTCTCTGAGCTCCA < 41bp 1 0.481919875595418 1 0.400032490491867 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75508290 chr11:75508276 synonymous SNV . 0 7 hm5C_associated_SNPs_35345 0 0 1 RPS3 POSTAR2 ENCODE chr11:75508259-75508328
64251 chr17 74557741 74557741 1 + C T SKCM 74557758 + 74557738 74557778 41 TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT TCCTTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT < 41bp 1 0.279132735984454 1 0.134171396493912 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557758 chr17:74557741 . . 0 4 hm5C_associated_SNPs_35346 0 0 124 TARDBP POSTAR2 DRA001158,DRS012386 chr17:74557682-74557800
64251 chr14 55818526 55818526 1 + C T SKCM 55818536 + 55818516 55818556 41 ATTTTAAACTCCTGTGAAGACCCAGTTCCAGGGATGTTGTT ATTTTAAACTTCTGTGAAGACCCAGTTCCAGGGATGTTGTT < 41bp 1 0.339688085686595 1 0.0558160841464996 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55818536 chr14:55818526 nonsynonymous SNV 0.096 0 11 hm5C_associated_SNPs_35350 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:55818504-55818528
64251 chr6 7580990 7580990 1 + G A SKCM 7580985 + 7580965 7581005 41 GCAGAAAGCAAACAGTAGTGCGACGGAGACAATAAACAAAC GCAGAAAGCAAACAGTAGTGCGACGAAGACAATAAACAAAC < 41bp 1 0.453693106447732 1 0.459630221128464 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7580985 chr6:7580990 nonsynonymous SNV 0.089 1 26 hm5C_associated_SNPs_35355 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7580979-7581020
64251 chr9 129974488 129974488 1 + C T SKCM 129974474 + 129974454 129974494 41 TGCCCACCATGGAGGGGCCTCTGAGAAGAAAAACCCTGCTC TGCCCACCATGGAGGGGCCTCTGAGAAGAAAAACTCTGCTC < 41bp 1 0.58728236543593 1 0.414956092834473 experiment 0.825435269128139 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129974474 chr9:129974488 synonymous SNV . 0 35 hm5C_associated_SNPs_35360 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:129974461-129974506
64251 chr20 33764058 33764058 1 + G A SKCM 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGAGAG < 41bp 1 0.691823029398697 1 0.825856804847717 experiment 0.616353941202606 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764058 nonsynonymous SNV 0.691 2 38 hm5C_associated_SNPs_35361 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764053-33764083
64251 chrX 73042686 73042686 1 - C T SKCM 73042691 - 73042671 73042711 41 TAGCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT TAGCTGTGATATGTTCGATACTAAGAAAAAACTAAACAGAT < 41bp 1 0.13445412375162 1 0.457359939813614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042691 chrX:73042686 . . 0 26 hm5C_associated_SNPs_35362 0 0 64 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr8 144680968 144680968 1 + G A SKCM 144680962 + 144680942 144680982 41 AGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAGCCTG AGCCGCTGGTCATCGGGCGGCTGCCGAACCCGCCCAGCCTG < 41bp 1 0.428352183095352 1 0.743977963924408 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144680962 chr8:144680968 nonsynonymous SNV 0.951 2 27 hm5C_associated_SNPs_35363 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:144680960-144680980
64251 chr9 20990235 20990235 1 + T C SKCM 20990218 + 20990198 20990238 41 GCCTCAGTGCCAGTTGGTTGCCATGGCATCAGGAGAATGGC GCCTCAGTGCCAGTTGGTTGCCATGGCATCAGGAGAACGGC < 41bp 1 0.167499200063721 1 0.090839296579361 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990218 chr9:20990235 synonymous SNV . 0 38 hm5C_associated_SNPs_35364 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990235 20990235 1 + T C SKCM 20990239 + 20990219 20990259 41 CATGGCATCAGGAGAATGGCCCGGCTGGGCCAGTACCAAGC CATGGCATCAGGAGAACGGCCCGGCTGGGCCAGTACCAAGC < 41bp 1 0.245862093163027 1 0.712515771389008 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990239 chr9:20990235 synonymous SNV . 0 17 hm5C_associated_SNPs_35365 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990235 20990235 1 + T C SKCM 20990248 + 20990228 20990268 41 AGGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGC AGGAGAACGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGC < 41bp 1 0.192791118587549 1 0.0837207734584808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990248 chr9:20990235 synonymous SNV . 0 8 hm5C_associated_SNPs_35366 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr9 20990235 20990235 1 + T C SKCM 20990249 + 20990229 20990269 41 GGAGAATGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCA GGAGAACGGCCCGGCTGGGCCAGTACCAAGCTTCCTTGGCA < 41bp 1 0.465996475386199 1 0.132165998220444 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOCAD ENSG00000188352 CDS Human protein_coding chr9:20990249 chr9:20990235 synonymous SNV . 0 7 hm5C_associated_SNPs_35367 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:20990214-20990242
64251 chr16 624338 624338 1 + C T SKCM 624339 + 624319 624359 41 AGAGCCTGGGTGCTGTCTTCCCCCATGAGCCCTGGCTGCGG AGAGCCTGGGTGCTGTCTTTCCCCATGAGCCCTGGCTGCGG < 41bp 1 0.620125844173095 1 0.725298702716827 experiment 0.75974831165381 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:624339 chr16:624338 synonymous SNV . 0 20 hm5C_associated_SNPs_35368 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:624320-624340
64251 chr15 91503669 91503669 1 + C A SKCM 91503649 + 91503629 91503669 41 TTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCTCCC TTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCTCCA < 41bp 1 0.481426727212764 1 0.330952376127243 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91503649 chr15:91503669 nonsynonymous SNV 0.820 3 41 hm5C_associated_SNPs_35370 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91503658-91503676
64251 chr15 91503669 91503669 1 + C A SKCM 91503678 + 91503658 91503698 41 ACTGGATCTCCCCATGGGCTCAGATGCAGTCAAGGCCAGCT ACTGGATCTCCACATGGGCTCAGATGCAGTCAAGGCCAGCT < 41bp 1 0.452315902364474 1 0.482590287923813 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91503678 chr15:91503669 nonsynonymous SNV 0.820 3 12 hm5C_associated_SNPs_35371 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91503658-91503676
64251 chr11 67815413 67815413 1 + G A SKCM 67815417 + 67815397 67815437 41 CACCGGTGTCTTCCTGGGACCCTACCCCTTTGGCATCGATC CACCGGTGTCTTCCTGAGACCCTACCCCTTTGGCATCGATC < 41bp 1 0.0115840077188421 1 0.0419726073741913 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815417 chr11:67815413 nonsynonymous SNV 0.999 3 17 hm5C_associated_SNPs_35372 0 0 2 NOL12 POSTAR2 ENCODE chr11:67815402-67815430
64251 chr11 67815413 67815413 1 + G A SKCM 67815433 + 67815413 67815453 41 GGACCCTACCCCTTTGGCATCGATCCTGTGAGTCCTGGGAT AGACCCTACCCCTTTGGCATCGATCCTGTGAGTCCTGGGAT < 41bp 1 0.112014486708118 1 0.250919759273529 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815433 chr11:67815413 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_35373 0 0 2 NOL12 POSTAR2 ENCODE chr11:67815402-67815430
64251 chr19 18966754 18966754 1 + C T SKCM 18966735 + 18966715 18966755 41 TGCCCCAATGGTGTTGCAGGCCGGTGCTGGTGTGTGCTCCG TGCCCCAATGGTGTTGCAGGCCGGTGCTGGTGTGTGCTCTG < 41bp 1 0.349476135589474 1 0.517578899860382 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966735 chr19:18966754 nonsynonymous SNV 0.042 5 40 hm5C_associated_SNPs_35374 0 0 10 BUD13 POSTAR2 ENCODE chr19:18966710-18966788
64251 chr11 67815412 67815412 1 + G A SKCM 67815417 + 67815397 67815437 41 CACCGGTGTCTTCCTGGGACCCTACCCCTTTGGCATCGATC CACCGGTGTCTTCCTAGGACCCTACCCCTTTGGCATCGATC < 41bp 1 0.00872769220970116 1 0.0432409346103668 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67815417 chr11:67815412 synonymous SNV . 0 16 hm5C_associated_SNPs_35375 0 0 2 NOL12 POSTAR2 ENCODE chr11:67815402-67815430
64251 chr12 112940036 112940036 1 + G T SKCM 112940029 + 112940009 112940049 41 GTGGAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA GTGGAGATCAGAGCCCTCTCCCGCCTTTTACTCCAACGCCA < 41bp 1 0.314064132464165 1 0.102933615446091 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112940029 chr12:112940036 nonsynonymous SNV 0.998 2 28 hm5C_associated_SNPs_35377 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:112940004-112940060
64251 chr16 89965178 89965178 1 + C T SKCM 89965194 + 89965174 89965214 41 GTCTCGAGCCGGATGAGGACCCCCTCTGCATGCTGCTGCTC GTCTTGAGCCGGATGAGGACCCCCTCTGCATGCTGCTGCTC < 41bp 1 0.251265560816962 1 0.07496577501297 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89965194 chr16:89965178 synonymous SNV . 0 5 hm5C_associated_SNPs_35378 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:89965160-89965180
64251 chr7 16737780 16737780 1 + C T SKCM 16737766 + 16737746 16737786 41 AATACTGCTACGACAACATCCATTTCATGAAAGCCTTTCAG AATACTGCTACGACAACATCCATTTCATGAAAGCTTTTCAG < 41bp 1 0.0631157935067103 1 0.360406339168549 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16737766 chr7:16737780 synonymous SNV . 0 35 hm5C_associated_SNPs_35379 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:16737773-16737798
64251 chr1 87208012 87208012 1 + C T SKCM 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTCTTCTTCCAACCTCAGTGACCTTAAGGAGTGTAG < 41bp 1 0.307369155764821 1 0.310170620679855 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208012 nonsynonymous SNV 0.997 0 10 hm5C_associated_SNPs_35384 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:87207995-87208025
64251 chr9 133355802 133355802 1 + C T SKCM 133355811 + 133355791 133355831 41 CGTATTGACATCGTGGAGAACCGCTTCATTGGAATGAAGTC CGTATTGACATTGTGGAGAACCGCTTCATTGGAATGAAGTC < 41bp 1 0.105847774987565 1 0.070110023021698 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ASS1 ENSG00000130707 CDS Human protein_coding chr9:133355811 chr9:133355802 synonymous SNV . 0 12 hm5C_associated_SNPs_35386 1 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:133355780-133355808
64251 chr20 3520922 3520922 1 + G A SKCM 3520926 + 3520906 3520946 41 GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGATGG GCTACAGAGTGTAGTTAGGACCATTTATATGTTTATGATGG < 41bp 1 0.0263182285419985 1 0.116140246391296 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3520926 chr20:3520922 stopgain 1.000 1 17 hm5C_associated_SNPs_35387 0 0 2 LIN28B POSTAR2 ENCODE chr20:3520898-3520942
64251 chr17 7318297 7318297 1 + C T SKCM 7318290 + 7318270 7318310 41 GCCAGGGCTGTTCCAGAAGGCCATCGCCCAGAGTGGCACCG GCCAGGGCTGTTCCAGAAGGCCATCGCTCAGAGTGGCACCG < 41bp 1 0.0290279083562257 1 0.0801794528961182 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318290 chr17:7318297 synonymous SNV . 0 28 hm5C_associated_SNPs_35388 0 0 1 LSM11 POSTAR2 ENCODE chr17:7318275-7318309
64251 chr11 67047168 67047168 1 + C T SKCM 67047163 + 67047143 67047183 41 AGAAGCAGGTGCCTCCGGATCTCTTCCAGGTGTGTGCCTCC AGAAGCAGGTGCCTCCGGATCTCTTTCAGGTGTGTGCCTCC < 41bp 1 0.214613204493245 1 0.660452961921692 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047163 chr11:67047168 synonymous SNV . 0 26 hm5C_associated_SNPs_35389 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr1 53416510 53416510 1 + G A SKCM 53416511 + 53416491 53416531 41 CAATGTCAACAATAACTGTGCTACTGGTTCTACTGCTTTGT CAATGTCAACAATAACTGTACTACTGGTTCTACTGCTTTGT < 41bp 1 0.216621429703091 1 0.037497341632843 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53416511 chr1:53416510 nonsynonymous SNV 0.946 3 20 hm5C_associated_SNPs_35392 0 0 1 FASTKD2 POSTAR2 ENCODE chr1:53416424-53416513
64251 chr13 99042345 99042345 1 + C T SKCM 99042342 + 99042322 99042362 41 AAACCAAAGCCCAAGCCCGTCCTCTTTAGCCGGGGGTCATC AAACCAAAGCCCAAGCCCGTCCTTTTTAGCCGGGGGTCATC < 41bp 1 0.0137735071117974 1 0.0239726901054382 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99042342 chr13:99042345 synonymous SNV . 0 24 hm5C_associated_SNPs_35394 0 0 2 GRWD1 POSTAR2 ENCODE chr13:99042325-99042360
64251 chr3 183898715 183898715 1 + C T SKCM 183898730 + 183898710 183898750 41 ATCGTCGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG ATCGTTGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG < 41bp 1 0.778352192599965 1 0.721748888492584 experiment 0.443295614800071 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898730 chr3:183898715 nonsynonymous SNV 0.993 4 6 hm5C_associated_SNPs_35405 0 0 27 TARDBP POSTAR2 DRA001158,DRS012386 chr3:183898670-183898760
64251 chr8 38899578 38899578 1 + C T SKCM 38899577 + 38899557 38899597 41 CTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTG CTGATGAAGCCTATAGTGCTCTCTCCTGTGGTAATAAGTTG < 41bp 1 0.228926674045028 1 0.0752636194229126 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899577 chr8:38899578 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_35406 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr8 38899578 38899578 1 + C T SKCM 38899581 + 38899561 38899601 41 TGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG TGAAGCCTATAGTGCTCTCTCCTGTGGTAATAAGTTGGTGG < 41bp 1 0.255622209382995 1 0.60075569152832 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899581 chr8:38899578 nonsynonymous SNV 0.995 4 18 hm5C_associated_SNPs_35407 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr7 100151725 100151725 1 + C T SKCM 100151721 + 100151701 100151741 41 TCCTTCTCCTCCAAGCCCGTCAGTCAGTCTCACGCTCGGAC TCCTTCTCCTCCAAGCCCGTCAGTTAGTCTCACGCTCGGAC < 41bp 1 0.0629243079653942 1 0.0516005158424377 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGFG2 ENSG00000106351 CDS Human protein_coding chr7:100151721 chr7:100151725 stopgain 0.292 1 25 hm5C_associated_SNPs_35408 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100151718-100151749
64251 chr7 91714906 91714906 1 + C T SKCM 91714891 + 91714871 91714911 41 TAGTGATGGAGAGGACCATTCTATTCAGCAGGTTTCAGAAC TAGTGATGGAGAGGACCATTCTATTCAGCAGGTTTTAGAAC < 41bp 1 0.169681732328315 1 0.178769946098328 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714891 chr7:91714906 nonsynonymous SNV 0.835 0 36 hm5C_associated_SNPs_35414 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:91714877-91714907
64251 chr7 91714906 91714906 1 + C T SKCM 91714896 + 91714876 91714916 41 ATGGAGAGGACCATTCTATTCAGCAGGTTTCAGAACCTTGG ATGGAGAGGACCATTCTATTCAGCAGGTTTTAGAACCTTGG < 41bp 1 0.72135885007746 1 0.419234365224838 experiment 0.55728229984508 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714896 chr7:91714906 nonsynonymous SNV 0.835 0 31 hm5C_associated_SNPs_35415 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:91714877-91714907
64251 chr7 91714906 91714906 1 + C T SKCM 91714912 + 91714892 91714932 41 TATTCAGCAGGTTTCAGAACCTTGGCTAGAAGAGAGAAAAG TATTCAGCAGGTTTTAGAACCTTGGCTAGAAGAGAGAAAAG < 41bp 1 0.149014537460457 1 0.119839519262314 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714912 chr7:91714906 nonsynonymous SNV 0.835 0 15 hm5C_associated_SNPs_35416 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:91714877-91714907
64251 chr7 91714906 91714906 1 + C T SKCM 91714917 + 91714897 91714937 41 AGCAGGTTTCAGAACCTTGGCTAGAAGAGAGAAAAGCTTAC AGCAGGTTTTAGAACCTTGGCTAGAAGAGAGAAAAGCTTAC < 41bp 1 0.385533366084324 1 0.479815363883972 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714917 chr7:91714906 nonsynonymous SNV 0.835 0 10 hm5C_associated_SNPs_35417 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:91714877-91714907
64251 chr1 233514958 233514958 1 + G A SKCM 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGAGACTGG < 41bp 1 0.262472114178702 1 0.0703678727149963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514958 nonsynonymous SNV 0.301 4 35 hm5C_associated_SNPs_35422 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr11 57575908 57575908 1 + C T SKCM 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGCGTCAAGAGAAGGCTCTTTTTGCCATAGCTGACCTC < 41bp 1 0.117335575345385 1 0.0563799440860748 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575908 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_35428 0 0 4 GRWD1 POSTAR2 ENCODE chr11:57575904-57576004
64251 chr19 19645922 19645922 1 + G A SKCM 19645936 + 19645916 19645956 41 CAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA CAGTGGAGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA < 41bp 1 0.774337757096558 1 0.506467819213867 experiment 0.451324485806883 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19645936 chr19:19645922 nonsynonymous SNV 0.996 4 7 hm5C_associated_SNPs_35430 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:19645906-19645954
64251 chr11 65824770 65824770 1 + C T SKCM 65824781 + 65824761 65824801 41 GCCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCC GCCCCACTCTTACAGTTTTGCCCATGGGAGCCCCTGTTCCC < 41bp 1 0.388695780454455 1 0.103326559066772 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824781 chr11:65824770 nonsynonymous SNV 0.978 0 10 hm5C_associated_SNPs_35431 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chr11 65824770 65824770 1 + C T SKCM 65824782 + 65824762 65824802 41 CCCCACTCCTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC CCCCACTCTTACAGTTTTGCCCATGGGAGCCCCTGTTCCCC < 41bp 1 0.307935376179939 1 0.199478954076767 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824782 chr11:65824770 nonsynonymous SNV 0.978 0 9 hm5C_associated_SNPs_35432 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65824739-65824773
64251 chrX 73046120 73046120 1 - C T SKCM 73046118 - 73046098 73046138 41 TTGACCCCAGAAGCCCTAGACTGAGAAGATAAAATGGTCAG TTGACCCCAGAAGCCCTAAACTGAGAAGATAAAATGGTCAG < 41bp 1 0.346344836861569 1 0.377483904361725 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046118 chrX:73046120 . . 0 19 hm5C_associated_SNPs_35439 0 0 98 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046120 73046120 1 - C T SKCM 73046124 - 73046104 73046144 41 TTTCTTTTGACCCCAGAAGCCCTAGACTGAGAAGATAAAAT TTTCTTTTGACCCCAGAAGCCCTAAACTGAGAAGATAAAAT < 41bp 1 0.0242324311475277 1 0.152468085289001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046124 chrX:73046120 . . 0 25 hm5C_associated_SNPs_35440 0 0 98 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046120 73046120 1 - C T SKCM 73046131 - 73046111 73046151 41 TCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAAG TCAGTCCTTTCTTTTGACCCCAGAAGCCCTAAACTGAGAAG < 41bp 1 0.210677166417483 1 0.378220975399017 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046131 chrX:73046120 . . 0 32 hm5C_associated_SNPs_35441 0 0 98 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046120 73046120 1 - C T SKCM 73046132 - 73046112 73046152 41 TTCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAA TTCAGTCCTTTCTTTTGACCCCAGAAGCCCTAAACTGAGAA < 41bp 1 0.126642771323361 1 0.274450749158859 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046132 chrX:73046120 . . 0 33 hm5C_associated_SNPs_35442 0 0 98 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr19 46202120 46202120 1 + C T SKCM 46202126 + 46202106 46202146 41 CTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGC CTACAGCCACTTCCTTCGCACGGTCCGCTGGTTCCATCGGC < 41bp 1 0.133174102736588 1 0.606796681880951 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46202126 chr19:46202120 nonsynonymous SNV 0.634 0 15 hm5C_associated_SNPs_35443 0 0 1 SND1 POSTAR2 ENCODE chr19:46202079-46202138
64251 chr2 192141644 192141644 1 + C T SKCM 192141649 + 192141629 192141669 41 AAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGA AAATGGAGGTGAAAATCTCACTTCTGGACAATATGATTGGA < 41bp 1 0.232869853868872 1 0.163124173879623 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141649 chr2:192141644 nonsynonymous SNV 0.886 2 16 hm5C_associated_SNPs_35454 0 0 1 GRWD1 POSTAR2 ENCODE chr2:192141642-192141755
64251 chr1 161132151 161132151 1 + G A SKCM 161132159 + 161132139 161132179 41 AAGAGGTGCCTGGAGGAGGCCGAGCCCAAGAGCTCACTGAA AAGAGGTGCCTGAAGGAGGCCGAGCCCAAGAGCTCACTGAA < 41bp 1 0.366460177609913 1 0.659542858600616 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161132159 chr1:161132151 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_35455 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161132092-161132165
64251 chr2 70164477 70164477 1 + G A SKCM 70164486 + 70164466 70164506 41 AGGATCCGGATGGACAGCATCGGCTCCACCGTCTCCTCGGA AGGATCCGGATAGACAGCATCGGCTCCACCGTCTCCTCGGA < 41bp 1 0.718459062772226 1 0.512722134590149 experiment 0.563081874455548 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MXD1 ENSG00000059728 CDS Human protein_coding chr2:70164486 chr2:70164477 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_35457 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:70164435-70164479
64251 chr19 1278944 1278944 1 + C T SKCM 1278943 + 1278923 1278963 41 CCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTG CCTTTTGGAACCTGCACAGCCTGCCGACCTGTTGCCACCTG < 41bp 1 0.670702277744726 1 0.157398849725723 experiment 0.658595444510548 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278943 chr19:1278944 synonymous SNV . 0 22 hm5C_associated_SNPs_35462 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1278924-1278956
64251 chr1 155288061 155288061 1 + C T SKCM 155288044 + 155288024 155288064 41 TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTG TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAATCTG < 41bp 1 0.246411179516687 1 0.172120302915573 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155288044 chr1:155288061 synonymous SNV . 0 38 hm5C_associated_SNPs_35463 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155288026-155288083
64251 chr20 57466805 57466805 1 + G A SKCM 57466815 + 57466795 57466835 41 GGAACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCG GGAACAGTAAAACCGAGGACCAGCGCAACGAGGAGAAGGCG < 41bp 1 0.471315590242293 1 0.755493760108948 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466815 chr20:57466805 synonymous SNV . 0 11 hm5C_associated_SNPs_35464 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57466805 57466805 1 + G A SKCM 57466818 + 57466798 57466838 41 ACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCGCAG ACAGTAAAACCGAGGACCAGCGCAACGAGGAGAAGGCGCAG < 41bp 1 0.58949027356313 1 0.540144801139832 experiment 0.821019452873741 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57466818 chr20:57466805 synonymous SNV . 0 8 hm5C_associated_SNPs_35465 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819216 chr20:57466680-57466880
64251 chr20 57480491 57480491 1 + C A SKCM 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA GAGGATGAAGGAGTGCGTGCCTGATACGAACGCTCCAACGA < 41bp 1 0.42268337931938 1 0.166440695524216 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480491 stopgain 0.987 1 24 hm5C_associated_SNPs_35467 0 0 35 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr6 33411314 33411314 1 + C T SKCM 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCTC < 41bp 1 0.205200088085914 1 0.177944183349609 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411314 synonymous SNV . 0 40 hm5C_associated_SNPs_35468 0 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr10 103919292 103919292 1 + G A SKCM 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGACGAGGAAAAGGAGCAAAAAAAACCCATGAAAAAT < 41bp 1 0.546068684939631 1 0.576017022132874 experiment 0.907862630120738 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919292 nonsynonymous SNV 0.863 1 15 hm5C_associated_SNPs_35469 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919229-103919298
64251 chr7 138944071 138944071 1 + G A SKCM 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGAGGAAAAG < 41bp 1 0.472231861656889 1 0.595632433891296 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944071 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_35470 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr1 109814029 109814029 1 + C T SKCM 109814010 + 109813990 109814030 41 GCCTGTCCCTATCCCCAGCTCGGGCCTGCAGCCCTCCTTCG GCCTGTCCCTATCCCCAGCTCGGGCCTGCAGCCCTCCTTTG < 41bp 1 0.467989215683033 1 0.726339817047119 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109814010 chr1:109814029 synonymous SNV . 0 40 hm5C_associated_SNPs_35472 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109814027-109814037
64251 chr11 65271911 65271911 1 + A G SKCM 65271929 + 65271909 65271949 41 GTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGA GTGTGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGA < 41bp 1 0.37598893887521 1 0.083499401807785 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271929 chr11:65271911 . . 0 3 hm5C_associated_SNPs_35473 0 0 134 PTBP1 POSTAR2 GSE19323,GSM480478 chr11:65271780-65271920
64251 chr11 65386194 65386194 1 + C T SKCM 65386204 + 65386184 65386224 41 TCCTGCTACTCCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG TCCTGCTACTTCCCTGAGAGCTCCCGGGGTGCAGCAGGGGG < 41bp 1 0.247469810616264 1 0.196615755558014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65386204 chr11:65386194 nonsynonymous SNV 0.990 3 11 hm5C_associated_SNPs_35474 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65386130-65386198
64251 chr20 47567936 47567936 1 + T A SKCM 47567952 + 47567932 47567972 41 AGAATTGTTGAAACCATTTGCAGTTGTTTTCAGGGCCCTCA AGAAATGTTGAAACCATTTGCAGTTGTTTTCAGGGCCCTCA < 41bp 1 0.296461640503191 1 0.416374683380127 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47567952 chr20:47567936 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_35478 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47567920-47567940
64251 chr16 66918541 66918541 1 + C T SKCM 66918554 + 66918534 66918574 41 CCAATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC CCAATTCTCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC < 41bp 1 0.742955204762835 1 0.357903242111206 experiment 0.514089590474331 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918554 chr16:66918541 synonymous SNV . 0 8 hm5C_associated_SNPs_35479 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:66918540-66918541
64251 chr14 104642788 104642788 1 + C T SKCM 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACTCGTG < 41bp 1 0.175037044013409 1 0.0485526025295258 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642788 synonymous SNV . 0 37 hm5C_associated_SNPs_35480 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104642723-104642789
64251 chr22 30403281 30403281 1 + G A SKCM 30403290 + 30403270 30403310 41 ACTTTCCCAATGGGGGAGACCTTTCTGACGTGGAGTTCGGT ACTTTCCCAATAGGGGAGACCTTTCTGACGTGGAGTTCGGT < 41bp 1 0.0180729557735528 1 0.0812144577503204 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30403290 chr22:30403281 nonsynonymous SNV 0.980 2 12 hm5C_associated_SNPs_35485 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:30403269-30403293
64251 chr22 23438415 23438415 1 + C T SKCM 23438428 + 23438408 23438448 41 CTGCGCTCCCGGGACATGACCACGGGCATTGTGGAGAACAA CTGCGCTTCCGGGACATGACCACGGGCATTGTGGAGAACAA < 41bp 1 0.718643812939726 1 0.832268953323364 experiment 0.562712374120549 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438428 chr22:23438415 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_35486 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23438410-23438438
64251 chr7 892478 892478 1 + C T SKCM 892492 + 892472 892512 41 CAATTTCTTTTCGTTCTTGCCCGTGTTGAACTGGGCAAGCA CAATTTTTTTTCGTTCTTGCCCGTGTTGAACTGGGCAAGCA < 41bp 1 0.255751624078082 1 0.0706012845039368 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:892492 chr7:892478 synonymous SNV . 0 7 hm5C_associated_SNPs_35487 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:892450-892484
64251 chr10 103310563 103310563 1 + C T SKCM 103310555 + 103310535 103310575 41 TCTGGGACTTCCTAAATGATCCAGCTGCCCAAGCTGAACCC TCTGGGACTTCCTAAATGATCCAGCTGCTCAAGCTGAACCC < 41bp 1 0.361051576867088 1 0.407195329666138 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BTRC ENSG00000166167 CDS Human protein_coding chr10:103310555 chr10:103310563 synonymous SNV . 0 29 hm5C_associated_SNPs_35490 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr10:103310562-103310563
64251 chr16 601532 601532 1 + C T SKCM 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACCTGTGGGGCCGTTTCTCCTGGAACGGCAGC < 41bp 1 0.0267018287000939 1 0.0684864521026611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601532 nonsynonymous SNV 0.975 5 13 hm5C_associated_SNPs_35491 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr16 601532 601532 1 + C T SKCM 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACCTGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG < 41bp 1 0.505773913572703 1 0.896170675754547 experiment 0.988452172854594 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601532 nonsynonymous SNV 0.975 5 6 hm5C_associated_SNPs_35492 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr22 41735895 41735895 1 + G A SKCM 41735900 + 41735880 41735920 41 CCCGTGTTCCCCGGCGGGACCCCACTGCTACCACCTGTGGT CCCGTGTTCCCCGGCAGGACCCCACTGCTACCACCTGTGGT < 41bp 1 0.0670512619750958 1 0.0646528899669647 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735900 chr22:41735895 nonsynonymous SNV 0.987 3 16 hm5C_associated_SNPs_35494 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41735876-41735897
64251 chr1 7796526 7796526 1 + C T SKCM 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTTCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG < 41bp 1 0.297821045438357 1 0.323149740695953 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796526 synonymous SNV . 0 3 hm5C_associated_SNPs_35495 0 0 2 BUD13 POSTAR2 ENCODE chr1:7796466-7796582
64251 chr16 601531 601531 1 + C T SKCM 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCCGAAACTCGTGGGGCCGTTTCTCCTGGAACGGCAGC < 41bp 1 0.0232414748402202 1 0.0489689707756042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601531 nonsynonymous SNV 0.986 5 12 hm5C_associated_SNPs_35496 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr16 601531 601531 1 + C T SKCM 601547 + 601527 601567 41 AAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG AAACTCGTGGGGCCGTTTCTCCTGGAACGGCAGCTGGTCCG < 41bp 1 0.46752809437638 1 0.924241185188293 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601547 chr16:601531 nonsynonymous SNV 0.986 5 5 hm5C_associated_SNPs_35497 0 0 1 SRSF1 POSTAR2 ENCODE chr16:601530-601623
64251 chr17 53852169 53852169 1 + C T SKCM 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTTGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT < 41bp 1 0.304697090207229 1 0.113316476345062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852169 synonymous SNV . 0 5 hm5C_associated_SNPs_35498 0 0 3 GPKOW POSTAR2 ENCODE chr17:53852132-53852215
64251 chr20 60768522 60768522 1 + C T SKCM 60768502 + 60768482 60768522 41 ACCTGCAAGGTGTTTCTCAGCAAGATTGAGGACCGTGTTTC ACCTGCAAGGTGTTTCTCAGCAAGATTGAGGACCGTGTTTT < 41bp 1 0.795084094631136 1 0.41072615981102 experiment 0.409831810737727 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG2 ENSG00000101181 CDS Human protein_coding chr20:60768502 chr20:60768522 stopgain 0.000 0 41 hm5C_associated_SNPs_35499 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:60768499-60768535
64251 chr19 3527673 3527673 1 + C T SKCM 3527693 + 3527673 3527713 41 CCAAGATCCCCTTCAAGGTGCTGGACGCGCCCGAGCTGCAG TCAAGATCCCCTTCAAGGTGCTGGACGCGCCCGAGCTGCAG < 41bp 1 0.73350023624644 1 0.255039840936661 experiment 0.53299952750712 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3527693 chr19:3527673 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_35500 0 0 1 DDX24 POSTAR2 ENCODE chr19:3527628-3527681
64251 chr20 61450607 61450607 1 + C T SKCM 61450587 + 61450567 61450607 41 TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAAC TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAAT < 41bp 1 0.315402112550531 1 0.0916366279125214 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450587 chr20:61450607 nonsynonymous SNV 0.887 1 41 hm5C_associated_SNPs_35501 0 0 4 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61450607 61450607 1 + C T SKCM 61450588 + 61450568 61450608 41 GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACC GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAATC < 41bp 1 0.20142079891936 1 0.177187502384186 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450588 chr20:61450607 nonsynonymous SNV 0.887 1 40 hm5C_associated_SNPs_35502 0 0 4 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61450608 61450608 1 + C T SKCM 61450588 + 61450568 61450608 41 GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACC GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACT < 41bp 1 0.163271406067532 1 0.183100044727325 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450588 chr20:61450608 nonsynonymous SNV 0.888 2 41 hm5C_associated_SNPs_35503 0 0 5 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr5 176519776 176519776 1 + G A SKCM 176519758 + 176519738 176519778 41 ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGATG < 41bp 1 0.291870793184993 1 0.186469405889511 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176519758 chr5:176519776 nonsynonymous SNV 0.994 5 39 hm5C_associated_SNPs_35504 0 0 4 PRPF8 POSTAR2 ENCODE chr5:176519746-176519821
64251 chrX 73046495 73046495 1 - C T SKCM 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACCTGGGAAAATCCCAAGATGAGAACCCTAAAC < 41bp 1 0.599240269793099 1 0.641047835350037 experiment 0.801519460413801 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046495 . . 0 16 hm5C_associated_SNPs_35505 0 0 91 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr16 2027165 2027165 1 + C T SKCM 2027167 + 2027147 2027187 41 CCAGCTGCTGGGTGTCTTCTCAGGCCACCGGCGTGGCCTCT CCAGCTGCTGGGTGTCTTTTCAGGCCACCGGCGTGGCCTCT < 41bp 1 0.72658989645853 1 0.964671492576599 experiment 0.54682020708294 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control TBL3 ENSG00000183751 CDS Human protein_coding chr16:2027167 chr16:2027165 synonymous SNV . 0 19 hm5C_associated_SNPs_35506 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:2027164-2027165
64251 chr9 133761000 133761000 1 + C T SKCM 133760999 + 133760979 133761019 41 CGGCGACAGCAGGCAGTGGTCCAGCGGCCACTCAGGACTTC CGGCGACAGCAGGCAGTGGTCTAGCGGCCACTCAGGACTTC < 41bp 1 0.571444528481778 1 0.793468832969666 experiment 0.857110943036445 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760999 chr9:133761000 nonsynonymous SNV 0.019 2 22 hm5C_associated_SNPs_35509 0 0 4 FMR1 POSTAR2 ENCODE chr9:133760978-133761014
64251 chr8 22429243 22429243 1 + C T SKCM 22429234 + 22429214 22429254 41 TTCCTGTCAACTCCCAGAATCTTGGCACCCCTGGTCCAGCT TTCCTGTCAACTCCCAGAATCTTGGCACCTCTGGTCCAGCT < 41bp 1 0.243555720788438 1 0.336476445198059 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22429234 chr8:22429243 nonsynonymous SNV 0.000 0 30 hm5C_associated_SNPs_35510 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:22429229-22429264
64251 chr11 118374533 118374533 1 + C T SKCM 118374513 + 118374493 118374533 41 ACATGTTTTTTGGGCTTACCCCACTCTATGGAGTAAGATCC ACATGTTTTTTGGGCTTACCCCACTCTATGGAGTAAGATCT < 41bp 1 0.0602856189528417 1 0.193253546953201 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118374513 chr11:118374533 synonymous SNV . 0 41 hm5C_associated_SNPs_35511 0 0 1 RBM15 POSTAR2 ENCODE chr11:118374457-118374563
64251 chr1 16261124 16261124 1 + C T SKCM 16261121 + 16261101 16261141 41 CCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA CCATGCCTGTGATCGACGATCGTTCGGCAGACGCGGGCTCA < 41bp 1 0.0769118908663652 1 0.0774362981319427 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261121 chr1:16261124 nonsynonymous SNV 0.071 0 24 hm5C_associated_SNPs_35512 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:16261060-16261160
64251 chr12 69651683 69651683 1 + C T SKCM 69651667 + 69651647 69651687 41 GGCCAGCAGGACCAGGAGGGCCACCCCCACCTTTTCCAGGT GGCCAGCAGGACCAGGAGGGCCACCCCCACCTTTTCTAGGT < 41bp 1 0.142798347370311 1 0.217149317264557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69651667 chr12:69651683 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_35513 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:69651634-69651685
64251 chr7 128445511 128445511 1 + C T SKCM 128445505 + 128445485 128445525 41 AGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT AGAAATGGATTTCTTAGAGCCTGATCTTGAAATGCAGTTGT < 41bp 1 0.243829022557504 1 0.137603282928467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445505 chr7:128445511 nonsynonymous SNV 0.997 2 27 hm5C_associated_SNPs_35514 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr7 128445511 128445511 1 + C T SKCM 128445510 + 128445490 128445530 41 TGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG TGGATTTCTTAGAGCCTGATCTTGAAATGCAGTTGTTACGG < 41bp 1 0.601443876507685 1 0.475395679473877 experiment 0.797112246984629 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445510 chr7:128445511 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_35515 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr5 43173458 43173458 1 + T A SKCM 43173455 + 43173435 43173475 41 AATGTCCAAATTGTCATGAACGATTTGCTAGAAATAGCACT AATGTCCAAATTGTCATGAACGAATTGCTAGAAATAGCACT < 41bp 1 0.183071475250217 1 0.152678281068802 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43173455 chr5:43173458 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_35516 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:43173433-43173469
64251 chr10 105172941 105172941 1 + C T SKCM 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTTCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC < 41bp 1 0.106103211493574 1 0.0480006635189056 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172941 synonymous SNV . 0 4 hm5C_associated_SNPs_35518 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr7 133164807 133164807 1 + C T SKCM 133164812 + 133164792 133164832 41 GTTTCTCTGCAGGTTCGAATCGTCCTCCCATGCCATCAGTA GTTTCTCTGCAGGTTTGAATCGTCCTCCCATGCCATCAGTA < 41bp 1 0.264843972922024 1 0.256255328655243 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164812 chr7:133164807 synonymous SNV . 0 16 hm5C_associated_SNPs_35519 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:133164792-133164813
64251 chr19 5135385 5135385 1 + C T SKCM 5135388 + 5135368 5135408 41 GAGGCACCCATAGCCTCCCTCGGAAAGGGCTGCCCGGCCAC GAGGCACCCATAGCCTCTCTCGGAAAGGGCTGCCCGGCCAC < 41bp 1 0.761468473294788 1 0.941638231277466 experiment 0.477063053410425 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5135388 chr19:5135385 synonymous SNV . 0 18 hm5C_associated_SNPs_35520 0 0 1 FXR2 POSTAR2 ENCODE chr19:5135367-5135447
64251 chr16 28994560 28994560 1 + C T SKCM 28994555 + 28994535 28994575 41 GCTCCACCGCCGAGGCCTTCCAGATCGTGCTGTCCCACCTG GCTCCACCGCCGAGGCCTTCCAGATTGTGCTGTCCCACCTG < 41bp 1 0.705729815048032 1 0.909502744674683 experiment 0.588540369903936 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28994555 chr16:28994560 synonymous SNV . 0 26 hm5C_associated_SNPs_35521 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:28994542-28994564
64251 chr6 7579510 7579510 1 + G A SKCM 7579519 + 7579499 7579539 41 ATTCCACAGCTGAAAAATACCAAGATCGAAGTTTTGGAAGA ATTCCACAGCTAAAAAATACCAAGATCGAAGTTTTGGAAGA < 41bp 1 0.639746929857134 1 0.407772094011307 experiment 0.720506140285732 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579519 chr6:7579510 synonymous SNV . 0 12 hm5C_associated_SNPs_35535 0 0 2 BUD13 POSTAR2 ENCODE chr6:7579508-7579581
64251 chr1 180794045 180794045 1 + C T SKCM 180794028 + 180794008 180794048 41 GCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCCGAG GCTGGAGTAAACCATGTACTCATCTTTGAACTTAATCTGAG < 41bp 1 0.340997693845265 1 0.579878747463226 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180794028 chr1:180794045 nonsynonymous SNV 0.988 4 38 hm5C_associated_SNPs_35536 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:180794021-180794056
64251 chr14 65511121 65511121 1 + G A SKCM 65511109 + 65511089 65511129 41 CTGGTGGATGGCTGCTACTCCTTCTGGCAGGCGGGGCTCCT CTGGTGGATGGCTGCTACTCCTTCTGGCAGGCAGGGCTCCT < 41bp 1 0.412032769814311 1 0.016371876001358 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65511109 chr14:65511121 synonymous SNV . 0 33 hm5C_associated_SNPs_35537 0 0 1 RPS3 POSTAR2 ENCODE chr14:65511104-65511151
64251 chrX 73045913 73045913 1 - C A SKCM 73045896 - 73045876 73045916 41 GATGGTTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAG GATTGTTATGGAAAGGGTGACTGTGCCTGGGACAAAGCGAG < 41bp 1 0.207932311647403 1 0.170748651027679 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045896 chrX:73045913 . . 0 4 hm5C_associated_SNPs_35538 0 0 80 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr16 31235542 31235542 1 + G A SKCM 31235556 + 31235536 31235576 41 GCACCCGAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG GCACCCAAGCCTGGTGGTGTCTTCCTCTGGCCGCCGCGTGG < 41bp 1 0.298312879772828 1 0.0939420461654663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235556 chr16:31235542 synonymous SNV . 0 7 hm5C_associated_SNPs_35539 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31235513-31235568
64251 chr6 31594923 31594923 1 + C T SKCM 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACTCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.301480898236747 1 0.10601395368576 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594923 nonsynonymous SNV 0.999 3 5 hm5C_associated_SNPs_35540 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594923 31594923 1 + C T SKCM 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACTCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.282761106522014 1 0.107087522745132 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594923 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_35541 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594923 31594923 1 + C T SKCM 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACTCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.343456864718222 1 0.259258151054382 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594923 nonsynonymous SNV 0.999 3 3 hm5C_associated_SNPs_35542 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594923 31594923 1 + C T SKCM 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CTCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.574862050078962 1 0.434541940689087 experiment 0.850275899842076 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594923 nonsynonymous SNV 0.999 3 2 hm5C_associated_SNPs_35543 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr17 57738922 57738922 1 + A T SKCM 57738906 + 57738886 57738926 41 ACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATAC ACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACATATAC < 41bp 1 0.613588861962751 1 0.546362817287445 experiment 0.772822276074498 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57738906 chr17:57738922 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_35544 0 0 31 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:57738805-57738925
64251 chr12 8196335 8196335 1 + C T SKCM 8196351 + 8196331 8196371 41 TTTCCCGAAAGAGAAGACACCCTCCAGATGATGATGTAAGT TTTCTCGAAAGAGAAGACACCCTCCAGATGATGATGTAAGT < 41bp 1 0.0186036762979307 1 0.136124849319458 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXJ2 ENSG00000065970 CDS Human protein_coding chr12:8196351 chr12:8196335 synonymous SNV . 0 5 hm5C_associated_SNPs_35545 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:8196305-8196343
64251 chr6 7583128 7583128 1 + T A SKCM 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAGGAGGAGGCTAATAGGAAGATAGAATCGG < 41bp 1 0.123639139983551 1 0.195383191108704 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583128 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_35546 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr16 72134461 72134461 1 + C G SKCM 72134463 + 72134443 72134483 41 GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGT GTGCACAATCTGGTGCCTGCCTTTCTGGATGGGCGCATTGT < 41bp 1 0.0740904594393557 1 0.0228444039821625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134463 chr16:72134461 nonsynonymous SNV 0.998 3 19 hm5C_associated_SNPs_35547 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:72134440-72134478
64251 chr14 75359620 75359620 1 + C T SKCM 75359614 + 75359594 75359634 41 AACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATA AACCTACAGCAGCGGCAGTTCCTCCCTCTGCAGCACCCATA < 41bp 1 0.167068683000329 1 0.110494792461395 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359614 chr14:75359620 nonsynonymous SNV 0.525 1 27 hm5C_associated_SNPs_35548 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:75359593-75359623
64251 chrX 73046761 73046761 1 - G A SKCM 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGTTTCAAGGCTTGAGTTAGAAGTCTTAAGA < 41bp 1 0.539165735325983 1 0.114602327346802 experiment 0.921668529348033 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046761 . . 0 14 hm5C_associated_SNPs_35549 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046761 73046761 1 - G A SKCM 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTTTC < 41bp 1 0.323731026475386 1 0.377894014120102 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046761 . . 0 39 hm5C_associated_SNPs_35550 0 0 89 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr19 50285900 50285900 1 + C T SKCM 50285882 + 50285862 50285902 41 TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCCC TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGTCC < 41bp 1 0.213908992398128 1 0.207119941711426 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285882 chr19:50285900 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_35562 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50285888-50285911
64251 chr10 114918442 114918442 1 + C T SKCM 114918428 + 114918408 114918448 41 TTTGTTCTTTTTTTTCAGAACACAGCGAATGTTTCCTAAAT TTTGTTCTTTTTTTTCAGAACACAGCGAATGTTTTCTAAAT < 41bp 1 0.272355281389591 1 0.274420320987701 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114918428 chr10:114918442 synonymous SNV . 0 35 hm5C_associated_SNPs_35563 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:114918436-114918464
64251 chr4 126398345 126398345 1 + G A SKCM 126398352 + 126398332 126398372 41 AGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT AGAGTTACAGTTGAAGGTATCAGATCTCTAGAACCAATCCT < 41bp 1 0.118054144469681 1 0.783479809761047 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126398352 chr4:126398345 nonsynonymous SNV 0.992 4 14 hm5C_associated_SNPs_35564 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126398325-126398361
64251 chr5 173378909 173378909 1 + T G SKCM 173378893 + 173378873 173378913 41 ATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTT ATGGTTCACAGCCACTTGACCCACGAAAAACTATATGTGTT < 41bp 1 0.178858351604315 1 0.350405037403107 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173378893 chr5:173378909 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_35565 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:173378900-173378911
64251 chr19 806455 806455 1 + C T SKCM 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGG < 41bp 1 0.287091764674781 1 0.0276341140270233 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806455 nonsynonymous SNV 0.006 0 35 hm5C_associated_SNPs_35566 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGC < 41bp 1 0.340961109640954 1 0.044533908367157 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806455 nonsynonymous SNV 0.006 0 34 hm5C_associated_SNPs_35567 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCG < 41bp 1 0.43207665864714 1 0.0123945474624634 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806455 nonsynonymous SNV 0.006 0 33 hm5C_associated_SNPs_35568 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG CGTCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCGG < 41bp 1 0.554067004766479 1 0.135678470134735 experiment 0.891865990467042 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806455 nonsynonymous SNV 0.006 0 32 hm5C_associated_SNPs_35569 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806445 + 806425 806465 41 GTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGC GTCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCGGC < 41bp 1 0.454110125931675 1 0.364748150110245 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806445 chr19:806455 nonsynonymous SNV 0.006 0 31 hm5C_associated_SNPs_35570 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806446 + 806426 806466 41 TCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCG TCCACGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCGGCG < 41bp 1 0.715654954870738 1 0.430299580097198 experiment 0.568690090258524 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806446 chr19:806455 nonsynonymous SNV 0.006 0 30 hm5C_associated_SNPs_35571 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806450 + 806430 806470 41 CGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGG CGGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCGGCGGCGG < 41bp 1 0.0869612546371572 1 0.079433798789978 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806450 chr19:806455 nonsynonymous SNV 0.006 0 26 hm5C_associated_SNPs_35572 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chr19 806455 806455 1 + C T SKCM 806451 + 806431 806471 41 GGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGC GGCGCCCTGGCCCCCCTGGCCATCTCCTCGGCGGCGGCGGC < 41bp 1 0.247462881915688 1 0.158103823661804 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806451 chr19:806455 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_35573 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:806416-806460
64251 chrX 73041502 73041502 1 - C T SKCM 73041519 - 73041499 73041539 41 ATCACTCACAGAGGGTGGGACAGGAGGAAGAGTGAAGGAAA ATCACTCACAGAGGGTGGGACAGGAGGAAGAGTGAAGAAAA < 41bp 1 0.713026934546335 1 0.457081168889999 experiment 0.57394613090733 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041519 chrX:73041502 . . 0 38 hm5C_associated_SNPs_35574 0 0 81 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chr22 40802634 40802634 1 + C T SKCM 40802642 + 40802622 40802662 41 CAGGGCCAGCTCCTGGGGGCCGGCACCCTCACCAACCTCTC CAGGGCCAGCTCTTGGGGGCCGGCACCCTCACCAACCTCTC < 41bp 1 0.644376611830684 1 0.710940778255463 experiment 0.711246776338633 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802642 chr22:40802634 synonymous SNV . 0 13 hm5C_associated_SNPs_35576 0 0 1 DDX24 POSTAR2 ENCODE chr22:40802620-40802663
64251 chr19 5133912 5133912 1 + G A SKCM 5133900 + 5133880 5133920 41 CTCTGTTCTTCTAGAGGCATCCCCTTTCTCCGGGGAGGAAG CTCTGTTCTTCTAGAGGCATCCCCTTTCTCCGAGGAGGAAG < 41bp 1 0.0817401363631189 1 0.0315897464752197 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5133900 chr19:5133912 nonsynonymous SNV 0.358 2 33 hm5C_associated_SNPs_35592 0 0 7 BUD13 POSTAR2 ENCODE chr19:5133886-5133945
64251 chr5 71491946 71491946 1 + G A SKCM 71491948 + 71491928 71491968 41 GAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGATGA GAGAAGCAGGGAGTAGACAACATTGAAAAATTTGAAGATGA < 41bp 1 0.114943850892317 1 0.154300689697266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491948 chr5:71491946 nonsynonymous SNV 0.626 2 19 hm5C_associated_SNPs_35593 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71491940-71491964
64251 chr11 86017395 86017395 1 + C T SKCM 86017414 + 86017394 86017434 41 TCCTGAGGGAATGGGAGGATCTGTCTACTTTTCTTATCCTG TTCTGAGGGAATGGGAGGATCTGTCTACTTTTCTTATCCTG < 41bp 1 0.401407526053855 1 0.18933629989624 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017414 chr11:86017395 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_35595 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:86017368-86017396
64251 chr12 53663155 53663155 1 + G A SKCM 53663151 + 53663131 53663171 41 TGCTCCCCAGGACTATGAGGCCGTGGCTCGGGGCAGCTTTT TGCTCCCCAGGACTATGAGGCCGTAGCTCGGGGCAGCTTTT < 41bp 1 0.213237403318513 1 0.211024135351181 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663151 chr12:53663155 synonymous SNV . 0 25 hm5C_associated_SNPs_35597 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:53663140-53663160
64251 chr17 30694883 30694883 1 + C T SKCM 30694868 + 30694848 30694888 41 CCTGCAACAACTACAGAACCCCCAAAGCCTACATTCCCTGC CCTGCAACAACTACAGAACCCCCAAAGCCTACATTTCCTGC < 41bp 1 0.448853870093164 1 0.128404408693314 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30694868 chr17:30694883 synonymous SNV . 0 36 hm5C_associated_SNPs_35598 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:30694828-30694883
64251 chr17 18143908 18143908 1 + C T SKCM 18143895 + 18143875 18143915 41 GCGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGT GCGCTTGTTTTCTGCAGGGGCCCACCACGGGCCTACCATGT < 41bp 1 0.0359524526643307 1 0.125289499759674 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143895 chr17:18143908 synonymous SNV . 0 34 hm5C_associated_SNPs_35599 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143908 18143908 1 + C T SKCM 18143896 + 18143876 18143916 41 CGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGTG CGCTTGTTTTCTGCAGGGGCCCACCACGGGCCTACCATGTG < 41bp 1 0.046981228659509 1 0.0382841825485229 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143896 chr17:18143908 synonymous SNV . 0 33 hm5C_associated_SNPs_35600 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143908 18143908 1 + C T SKCM 18143897 + 18143877 18143917 41 GCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGTGG GCTTGTTTTCTGCAGGGGCCCACCACGGGCCTACCATGTGG < 41bp 1 0.76725979062985 1 0.339068353176117 experiment 0.465480418740301 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143897 chr17:18143908 synonymous SNV . 0 32 hm5C_associated_SNPs_35601 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143908 18143908 1 + C T SKCM 18143906 + 18143886 18143926 41 CTGCAGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACC CTGCAGGGGCCCACCACGGGCCTACCATGTGGGCTGGCACC < 41bp 1 0.0128263388478446 1 0.0305661261081696 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143906 chr17:18143908 synonymous SNV . 0 23 hm5C_associated_SNPs_35602 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143908 18143908 1 + C T SKCM 18143907 + 18143887 18143927 41 TGCAGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCA TGCAGGGGCCCACCACGGGCCTACCATGTGGGCTGGCACCA < 41bp 1 0.181073517640898 1 0.0776053071022034 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143907 chr17:18143908 synonymous SNV . 0 22 hm5C_associated_SNPs_35603 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr1 183083788 183083788 1 + T G SKCM 183083799 + 183083779 183083819 41 TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAA TGTGAGAGGGGCCGAGAGAACTTCTTCCGCCTTGGCAACAA < 41bp 1 0.458342430947202 1 0.33073216676712 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083799 chr1:183083788 nonsynonymous SNV 0.994 5 10 hm5C_associated_SNPs_35620 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:183083765-183083814
64251 chr8 48962468 48962468 1 + C T SKCM 48962459 + 48962439 48962479 41 CCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTC CCTGAAAGTAGAATGTGGACCTAAATACCTAGAAGCTCCTC < 41bp 1 0.784348111627596 1 0.357779800891876 experiment 0.431303776744808 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2V2 ENSG00000169139 CDS Human protein_coding chr8:48962459 chr8:48962468 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_35621 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48962414-48962491
64251 chr9 140110212 140110212 1 + C T SKCM 140110226 + 140110206 140110246 41 GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA GTAGCCTCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA < 41bp 1 0.125315041731376 1 0.0623038709163666 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110226 chr9:140110212 nonsynonymous SNV 0.967 5 7 hm5C_associated_SNPs_35623 0 0 1 PPIG POSTAR2 ENCODE chr9:140110207-140110234
64251 chr9 140110213 140110213 1 + C T SKCM 140110226 + 140110206 140110246 41 GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA GTAGCCCTCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA < 41bp 1 0.156122663390539 1 0.0685960054397583 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110226 chr9:140110213 nonsynonymous SNV 0.978 5 8 hm5C_associated_SNPs_35624 0 0 1 PPIG POSTAR2 ENCODE chr9:140110207-140110234
64251 chr1 36315797 36315797 1 + G A SKCM 36315787 + 36315767 36315807 41 AGTGGCAATGTACCAGCAGGCACTACAGTGGATAGTACCAT AGTGGCAATGTACCAGCAGGCACTACAGTGAATAGTACCAT < 41bp 1 0.391745543786433 1 0.218070089817047 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO4 ENSG00000134698 CDS Human protein_coding chr1:36315787 chr1:36315797 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_35625 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585670 chr1:36315778-36315820
64251 chr19 36593925 36593925 1 + C T SKCM 36593911 + 36593891 36593931 41 TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGCGGAAGC TGAAGTCTCCAGAGGTCAAGCTCATGGACCGAGGTGGAAGC < 41bp 1 0.298493425686273 1 0.148112028837204 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593911 chr19:36593925 synonymous SNV . 0 35 hm5C_associated_SNPs_35626 0 0 3 GRWD1 POSTAR2 ENCODE chr19:36593855-36593944
64251 chr19 36593925 36593925 1 + C T SKCM 36593920 + 36593900 36593940 41 CAGAGGTCAAGCTCATGGACCGAGGCGGAAGCCAGCCCAGA CAGAGGTCAAGCTCATGGACCGAGGTGGAAGCCAGCCCAGA < 41bp 1 0.515781656767791 1 0.878856837749481 experiment 0.968436686464419 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36593920 chr19:36593925 synonymous SNV . 0 26 hm5C_associated_SNPs_35627 0 0 3 GRWD1 POSTAR2 ENCODE chr19:36593855-36593944
64251 chr17 7606099 7606099 1 + T G SKCM 7606087 + 7606067 7606107 41 GAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGTTACCCACT GAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGGTACCCACT < 41bp 1 0.437309609759539 1 0.812788486480713 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606087 chr17:7606099 synonymous SNV . 0 33 hm5C_associated_SNPs_35628 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7606095-7606129
64251 chr6 32134488 32134488 1 + C A SKCM 32134481 + 32134461 32134501 41 CGGGCGCTGTGTTCCAGGACCATGTACCGCGTTATGTGGCG CGGGCGCTGTGTTCCAGGACCATGTACAGCGTTATGTGGCG < 41bp 1 0.182727591193235 1 0.230437338352203 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134481 chr6:32134488 nonsynonymous SNV 0.224 1 28 hm5C_associated_SNPs_35629 0 0 1 GRWD1 POSTAR2 ENCODE chr6:32134488-32134582
64251 chr17 7606100 7606100 1 + T G SKCM 7606087 + 7606067 7606107 41 GAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGTTACCCACT GAGCTCCTGTGCTGGGATCTCCGGCAGTCTGGTGACCCACT < 41bp 1 0.444248880225061 1 0.882537722587585 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606087 chr17:7606100 nonsynonymous SNV 0.605 0 34 hm5C_associated_SNPs_35630 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7606095-7606129
64251 chr21 42629153 42629153 1 + C T SKCM 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCCATCTACAAATGCGCTGGTGATCGGTGCCACGGTG < 41bp 1 0.549117451406282 1 0.285783290863037 experiment 0.901765097187436 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629153 synonymous SNV . 0 11 hm5C_associated_SNPs_35632 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr17 41345575 41345575 1 + C T SKCM 41345576 + 41345556 41345596 41 TATCATAGTAGATCCTTTCCCCTCCGAAGAGAGCCCTGATA TATCATAGTAGATCCTTTCTCCTCCGAAGAGAGCCCTGATA < 41bp 1 0.185243430283763 1 0.334711968898773 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345576 chr17:41345575 nonsynonymous SNV 0.736 0 20 hm5C_associated_SNPs_35633 0 0 4 BUD13 POSTAR2 ENCODE chr17:41345561-41345590
64251 chr19 36278120 36278120 1 + C T SKCM 36278132 + 36278112 36278152 41 TCCTGCGCCCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC TCCTGCGCTCTGGGGGTGCCCCACCCCCGCCCCCTAAGAAC < 41bp 1 0.181628405302086 1 0.392002522945404 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278132 chr19:36278120 nonsynonymous SNV 0.978 3 9 hm5C_associated_SNPs_35634 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:36278100-36278120
64251 chr11 10772987 10772987 1 + C T SKCM 10772973 + 10772953 10772993 41 CCCCATCATGTCGCGGGGCTCCATCGAGATTCCCCTCCGGG CCCCATCATGTCGCGGGGCTCCATCGAGATTCCCTTCCGGG < 41bp 1 0.12618161318148 1 0.111461788415909 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10772973 chr11:10772987 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_35635 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10772957-10772995
64251 chr20 5154287 5154287 1 + T G SKCM 5154273 + 5154253 5154293 41 GCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAA GCAGATGATACCCCGGAGGTCCTCAATAGGGCCCGTTCCAA < 41bp 1 0.180700312387935 1 0.0490334033966064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDS2 ENSG00000101290 CDS Human protein_coding chr20:5154273 chr20:5154287 nonsynonymous SNV 0.994 4 35 hm5C_associated_SNPs_35636 0 0 8 LIN28B POSTAR2 GSE44616,GSM1087851 chr20:5154271-5154297
64251 chr6 36569554 36569554 1 + C T SKCM 36569553 + 36569533 36569573 41 AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGGT AAATCACAAGCCGTCCCGATCTTTCTCTAGGTCTCGTAGGT < 41bp 1 0.0682784626393275 1 0.0434295535087585 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36569553 chr6:36569554 synonymous SNV . 0 22 hm5C_associated_SNPs_35639 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36569539-36569575
64251 chr3 183899730 183899730 1 + C T SKCM 183899728 + 183899708 183899748 41 CAACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTA CAACCAAGGACATCATCCTTCCTTTCCGGGTGATCCCGCTA < 41bp 1 0.0354652148700646 1 0.0369618237018585 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899728 chr3:183899730 synonymous SNV . 0 23 hm5C_associated_SNPs_35641 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899730 183899730 1 + C T SKCM 183899729 + 183899709 183899749 41 AACCAAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAG AACCAAGGACATCATCCTTCCTTTCCGGGTGATCCCGCTAG < 41bp 1 0.0867653719818167 1 0.037486732006073 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899729 chr3:183899730 synonymous SNV . 0 22 hm5C_associated_SNPs_35642 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr3 183899730 183899730 1 + C T SKCM 183899733 + 183899713 183899753 41 AAGGACATCATCCTTCCCTTCCGGGTGATCCCGCTAGTGCG AAGGACATCATCCTTCCTTTCCGGGTGATCCCGCTAGTGCG < 41bp 1 0.72553113595528 1 0.770242810249329 experiment 0.548937728089441 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899733 chr3:183899730 synonymous SNV . 0 18 hm5C_associated_SNPs_35643 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:183899696-183899769
64251 chr5 140731332 140731332 1 + C T SKCM 140731316 + 140731296 140731336 41 GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTCCGTG GTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTGTTCGTG < 41bp 1 0.197751359481782 1 0.0668373107910156 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731316 chr5:140731332 nonsynonymous SNV 0.315 3 37 hm5C_associated_SNPs_35644 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr11 17316984 17316984 1 + C T SKCM 17316973 + 17316953 17316993 41 ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGGAA ACATAGACAAGACAAAAGTACAAAATATTCATCCTGTGGAA < 41bp 1 0.673479078931092 1 0.0749988257884979 experiment 0.653041842137816 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17316973 chr11:17316984 synonymous SNV . 0 32 hm5C_associated_SNPs_35646 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:17316970-17317000
64251 chr20 30822425 30822425 1 + C T SKCM 30822434 + 30822414 30822454 41 TCTTCTTTCTTCGGCATGGACAGGCCCCCTAAGCTGCGGGA TCTTCTTTCTTTGGCATGGACAGGCCCCCTAAGCTGCGGGA < 41bp 1 0.732140923598323 1 0.526162981987 experiment 0.535718152803354 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822434 chr20:30822425 synonymous SNV . 0 12 hm5C_associated_SNPs_35648 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:30822413-30822472
64251 chr19 32973073 32973073 1 + C T SKCM 32973083 + 32973063 32973103 41 AACCTGCCTCCCTACGTGGCCTACTTCACCAGAGTGTTCCA AACCTGCCTCTCTACGTGGCCTACTTCACCAGAGTGTTCCA < 41bp 1 0.215080503222541 1 0.114098608493805 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32973083 chr19:32973073 nonsynonymous SNV 0.845 1 11 hm5C_associated_SNPs_35649 0 0 1 RBM15 POSTAR2 ENCODE chr19:32973073-32973215
64251 chr10 105048248 105048248 1 + C T SKCM 105048230 + 105048210 105048250 41 ACCTAGAATCCTCAGTGCTACAACCTCCAAAGTCTCATCCA ACCTAGAATCCTCAGTGCTACAACCTCCAAAGTCTCATTCA < 41bp 1 0.280048665348192 1 0.206360012292862 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INA ENSG00000148798 CDS Human protein_coding chr10:105048230 chr10:105048248 nonsynonymous SNV 0.823 2 39 hm5C_associated_SNPs_35653 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr10:105048238-105048260
64251 chr15 93496705 93496705 1 + C T SKCM 93496712 + 93496692 93496732 41 TCTTATAGTCGTCCCTTTATCCACCCTCACCTCATGGCAGA TCTTATAGTCGTCTCTTTATCCACCCTCACCTCATGGCAGA < 41bp 1 0.204565257136885 1 0.780890285968781 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93496712 chr15:93496705 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_35656 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr15:93496699-93496720
64251 chr16 3117520 3117520 1 + C T SKCM 3117519 + 3117499 3117539 41 GACCCTGGAGGGACAAGGATCCGGCCCTTTGGTGCCAACTC GACCCTGGAGGGACAAGGATCTGGCCCTTTGGTGCCAACTC < 41bp 1 0.717805056608785 1 0.512497842311859 experiment 0.564389886782429 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL32 ENSG00000008517 CDS Human protein_coding chr16:3117519 chr16:3117520 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_35657 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:3117423-3117561
64251 chr16 29851524 29851524 1 + C T SKCM 29851532 + 29851512 29851552 41 TTTTCCTCCAGCCAGGAGAGCAGCTGGAACAAGGCATCCAG TTTTCCTCCAGCTAGGAGAGCAGCTGGAACAAGGCATCCAG < 41bp 1 0.426839661730093 1 0.483132392168045 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29851532 chr16:29851524 nonsynonymous SNV 0.984 2 13 hm5C_associated_SNPs_35665 0 0 2 RPS3 POSTAR2 ENCODE chr16:29851516-29851582
64251 chr14 69704381 69704381 1 + C T SKCM 69704365 + 69704345 69704385 41 ACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC ACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTTCTGC < 41bp 1 0.484751882825781 1 0.0944666266441345 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXD2 ENSG00000081177 CDS Human protein_coding chr14:69704365 chr14:69704381 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_35666 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:69704356-69704386
64251 chrX 47442821 47442821 1 + C T SKCM 47442822 + 47442802 47442842 41 CACAGAACCCACCATGGCCCCCTTTGAGCCCCTGGCTTCTG CACAGAACCCACCATGGCCTCCTTTGAGCCCCTGGCTTCTG < 41bp 1 0.0670842914147887 1 0.0358971357345581 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47442822 chrX:47442821 nonsynonymous SNV 0.103 1 20 hm5C_associated_SNPs_35667 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:47442820-47442840
64251 chr6 43153909 43153909 1 + C T SKCM 43153923 + 43153903 43153943 41 CGGAACCTCAGCGAACAGGGCATGTCACCTCCCCGGCCAAC CGGAACTTCAGCGAACAGGGCATGTCACCTCCCCGGCCAAC < 41bp 1 0.153914047924779 1 0.173797607421875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CUL9 ENSG00000112659 CDS Human protein_coding chr6:43153923 chr6:43153909 nonsynonymous SNV 0.970 1 7 hm5C_associated_SNPs_35668 0 0 2 EIF3H POSTAR2 ENCODE chr6:43153787-43153951
64251 chr11 46747451 46747451 1 + G A SKCM 46747436 + 46747416 46747456 41 TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCA TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGACTCCA < 41bp 1 0.681105693264752 1 0.950963020324707 experiment 0.637788613470496 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control F2 ENSG00000180210 CDS Human protein_coding chr11:46747436 chr11:46747451 nonsynonymous SNV 0.003 1 36 hm5C_associated_SNPs_35670 0 0 1 SND1 POSTAR2 ENCODE chr11:46747442-46747459
64251 chr1 32620255 32620255 1 + C T SKCM 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGAGCTATAAGAACAATGCTCTAAACCTTGAAGAAATGA < 41bp 1 0.301764287226811 1 0.153964400291443 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620255 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_35671 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620255 32620255 1 + C T SKCM 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGAGCTATAAGAACAATGCTCTAAACCTTGAAGAAATGAGA < 41bp 1 0.265400342327872 1 0.15167760848999 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620255 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_35672 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620255 32620255 1 + C T SKCM 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGCTCTAAACCTTGAAGAAATGAGACGAAG < 41bp 1 0.07679945085659 1 0.132913112640381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620255 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_35673 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620255 32620255 1 + C T SKCM 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGCTCTAAACCTTGAAGAAATGAGACGAAGA < 41bp 1 0.532764665974814 1 0.416230797767639 experiment 0.934470668050372 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620255 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_35674 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr17 36873075 36873075 1 + T C SKCM 36873079 + 36873059 36873099 41 CCCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCT CCCAGCTGCCCCATCCCTGCCCAGTGCCCAGCTGGCTGGCT < 41bp 1 0.170251089041877 1 0.278382182121277 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873079 chr17:36873075 synonymous SNV . 0 17 hm5C_associated_SNPs_35675 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36873074-36873075
64251 chr17 36873075 36873075 1 + T C SKCM 36873080 + 36873060 36873100 41 CCAGCTGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTT CCAGCTGCCCCATCCCTGCCCAGTGCCCAGCTGGCTGGCTT < 41bp 1 0.324002257459941 1 0.0818459987640381 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873080 chr17:36873075 synonymous SNV . 0 16 hm5C_associated_SNPs_35676 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36873074-36873075
64251 chr17 36873075 36873075 1 + T C SKCM 36873085 + 36873065 36873105 41 TGCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCG TGCCCCATCCCTGCCCAGTGCCCAGCTGGCTGGCTTTACCG < 41bp 1 0.112810467057965 1 0.0345004498958588 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873085 chr17:36873075 synonymous SNV . 0 11 hm5C_associated_SNPs_35677 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36873074-36873075
64251 chr17 36873075 36873075 1 + T C SKCM 36873086 + 36873066 36873106 41 GCCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGC GCCCCATCCCTGCCCAGTGCCCAGCTGGCTGGCTTTACCGC < 41bp 1 0.117609826793095 1 0.111784160137177 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873086 chr17:36873075 synonymous SNV . 0 10 hm5C_associated_SNPs_35678 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36873074-36873075
64251 chr17 36873075 36873075 1 + T C SKCM 36873087 + 36873067 36873107 41 CCCCATCCTTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCC CCCCATCCCTGCCCAGTGCCCAGCTGGCTGGCTTTACCGCC < 41bp 1 0.375301342372168 1 0.438551694154739 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLLT6 ENSG00000108292 CDS Human other chr17:36873087 chr17:36873075 synonymous SNV . 0 9 hm5C_associated_SNPs_35679 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36873074-36873075
64251 chr6 44121498 44121498 1 + C T SKCM 44121489 + 44121469 44121509 41 TACCTGCCGGCCAAGCTGGACAAGAAGATCCACTCGGGGGC TACCTGCCGGCCAAGCTGGACAAGAAGATTCACTCGGGGGC < 41bp 1 0.688837150187868 1 0.370048314332962 experiment 0.622325699624264 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44121489 chr6:44121498 synonymous SNV . 0 30 hm5C_associated_SNPs_35681 0 0 1 DROSHA POSTAR2 ENCODE chr6:44121474-44121524
64251 chr11 76892609 76892609 1 + G A SKCM 76892615 + 76892595 76892635 41 GCCTGCCAGGCCAGGAGGGCCAGGCACCTAGTGGCTTTGAG GCCTGCCAGGCCAGAAGGGCCAGGCACCTAGTGGCTTTGAG < 41bp 1 0.281358033160488 1 0.527286410331726 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO7A ENSG00000137474 CDS Human protein_coding chr11:76892615 chr11:76892609 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_35683 0 0 2 EIF3H POSTAR2 ENCODE chr11:76892566-76892614
64251 chr3 47041163 47041163 1 + C T SKCM 47041164 + 47041144 47041184 41 TGGCTGTGGTACAGCTGTCCCTCCAGGCTGACCTCAGCGTT TGGCTGTGGTACAGCTGTCTCTCCAGGCTGACCTCAGCGTT < 41bp 1 0.686610638846366 1 0.966305732727051 experiment 0.626778722307268 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041164 chr3:47041163 synonymous SNV . 0 20 hm5C_associated_SNPs_35684 0 0 2 EIF3H POSTAR2 ENCODE chr3:47041142-47041190
64251 chr3 58118610 58118610 1 + G A SKCM 58118613 + 58118593 58118633 41 CACCCCATCTCAGGAGGGACCTTACATGGTCTCAGTTAAAT CACCCCATCTCAGGAGGAACCTTACATGGTCTCAGTTAAAT < 41bp 1 0.0256120464443696 1 0.361643612384796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58118613 chr3:58118610 nonsynonymous SNV 0.994 5 18 hm5C_associated_SNPs_35687 0 0 1 FXR2 POSTAR2 ENCODE chr3:58118581-58118618
64251 chr9 131669673 131669673 1 + C T SKCM 131669678 + 131669658 131669698 41 GGGCAGCCCCTGGCCCGGAGCCCACCTACCCCAACTCCACC GGGCAGCCCCTGGCCTGGAGCCCACCTACCCCAACTCCACC < 41bp 1 0.103356861681411 1 0.140166372060776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669678 chr9:131669673 nonsynonymous SNV 0.519 0 16 hm5C_associated_SNPs_35689 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:131669660-131669680
64251 chr19 18971135 18971135 1 + C T SKCM 18971127 + 18971107 18971147 41 TACTTCTTTCCCTCCCCTCACAGCGGATCGTGTGAAGAAGG TACTTCTTTCCCTCCCCTCACAGCGGATTGTGTGAAGAAGG < 41bp 1 0.131877184868357 1 0.256570786237717 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18971127 chr19:18971135 nonsynonymous SNV 0.993 5 29 hm5C_associated_SNPs_35690 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18971120-18971140
64251 chr14 56078982 56078982 1 + C T SKCM 56078994 + 56078974 56079014 41 GGAAACCTCCATGAATCCGACTCTGAGAGTGTACCTCGAGA GGAAACCTTCATGAATCCGACTCTGAGAGTGTACCTCGAGA < 41bp 1 0.241261156816847 1 0.0705785751342773 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56078994 chr14:56078982 synonymous SNV . 0 9 hm5C_associated_SNPs_35691 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr14:56078972-56078993
64251 chr10 103347150 103347150 1 - G A SKCM 103347146 - 103347126 103347166 41 CAGCAGCCCTGACCAACGCTCCAATAGGCCGGGATCCAGCC CAGCAGCCCTGACCAATGCTCCAATAGGCCGGGATCCAGCC < 41bp 1 0.294678828604122 1 0.0874148309230804 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLL ENSG00000166169;ENSG00000166171 UTR5 Human other chr10:103347146 chr10:103347150 . . 0 17 hm5C_associated_SNPs_35692 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:103347140-103347160
64251 chr2 85280376 85280376 1 + T G SKCM 85280356 + 85280336 85280376 41 GCCTGTTTGTCCAAGAGCTCCTTCTGTCCACTTTAGTGCGT GCCTGTTTGTCCAAGAGCTCCTTCTGTCCACTTTAGTGCGG < 41bp 1 0.27304521480691 1 0.0418373048305511 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KCMF1 ENSG00000176407 CDS Human protein_coding chr2:85280356 chr2:85280376 synonymous SNV . 0 41 hm5C_associated_SNPs_35693 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:85280270-85280377
64251 chr7 100210448 100210448 1 + G A SKCM 100210428 + 100210408 100210448 41 AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGG AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGA < 41bp 1 0.401941652838826 1 0.201620817184448 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210428 chr7:100210448 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_35695 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210430 + 100210410 100210450 41 CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGATG < 41bp 1 0.682503788097016 1 0.116262555122375 experiment 0.634992423805967 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210430 chr7:100210448 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_35696 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210431 + 100210411 100210451 41 CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGATGG < 41bp 1 0.497750840801774 1 0.623031556606293 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210431 chr7:100210448 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_35697 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210432 + 100210412 100210452 41 TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGATGGG < 41bp 1 0.563773926568951 1 0.786584079265594 experiment 0.872452146862098 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210432 chr7:100210448 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_35698 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210460 + 100210440 100210480 41 AGGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG AGGAGCTGATGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG < 41bp 1 0.256448140971733 1 0.175878494977951 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210460 chr7:100210448 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_35699 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210461 + 100210441 100210481 41 GGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG GGAGCTGATGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG < 41bp 1 0.426946353863407 1 0.0667397975921631 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210461 chr7:100210448 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_35700 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210462 + 100210442 100210482 41 GAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG GAGCTGATGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG < 41bp 1 0.433786834256208 1 0.417752325534821 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210462 chr7:100210448 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_35701 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210448 100210448 1 + G A SKCM 100210463 + 100210443 100210483 41 AGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGGC AGCTGATGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGGC < 41bp 1 0.691536719107778 1 0.429372638463974 experiment 0.616926561784443 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210463 chr7:100210448 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_35702 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr5 5463406 5463406 1 + C T SKCM 5463400 + 5463380 5463420 41 CTCATCACATGCTTCAGAACCAACCCCACAAGCAGCTGCCT CTCATCACATGCTTCAGAACCAACCCTACAAGCAGCTGCCT < 41bp 1 0.263573617019064 1 0.302470147609711 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ICE1 ENSG00000164151 CDS Human protein_coding chr5:5463400 chr5:5463406 nonsynonymous SNV 0.000 1 27 hm5C_associated_SNPs_35703 0 0 1 EIF3H POSTAR2 ENCODE chr5:5463363-5463432
64251 chr7 100210447 100210447 1 + G A SKCM 100210428 + 100210408 100210448 41 AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGG AGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTAG < 41bp 1 0.412937933299433 1 0.261059105396271 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210428 chr7:100210447 synonymous SNV . 0 40 hm5C_associated_SNPs_35704 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210430 + 100210410 100210450 41 CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTG CCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTAGTG < 41bp 1 0.693965991203735 1 0.080296665430069 experiment 0.61206801759253 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210430 chr7:100210447 synonymous SNV . 0 38 hm5C_associated_SNPs_35705 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210431 + 100210411 100210451 41 CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG CTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTAGTGG < 41bp 1 0.477821422284051 1 0.557996034622192 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210431 chr7:100210447 synonymous SNV . 0 37 hm5C_associated_SNPs_35706 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210432 + 100210412 100210452 41 TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGGG TGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTAGTGGG < 41bp 1 0.570164735093177 1 0.78409469127655 experiment 0.859670529813645 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210432 chr7:100210447 synonymous SNV . 0 36 hm5C_associated_SNPs_35707 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210460 + 100210440 100210480 41 AGGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG AGGAGCTAGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGG < 41bp 1 0.282708608468482 1 0.177844136953354 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210460 chr7:100210447 synonymous SNV . 0 8 hm5C_associated_SNPs_35708 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210461 + 100210441 100210481 41 GGAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG GGAGCTAGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGG < 41bp 1 0.485840321108922 1 0.0942795872688293 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210461 chr7:100210447 synonymous SNV . 0 7 hm5C_associated_SNPs_35709 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210462 + 100210442 100210482 41 GAGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG GAGCTAGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGG < 41bp 1 0.413140003274783 1 0.423829525709152 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210462 chr7:100210447 synonymous SNV . 0 6 hm5C_associated_SNPs_35710 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr7 100210447 100210447 1 + G A SKCM 100210463 + 100210443 100210483 41 AGCTGGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGGC AGCTAGTGGGTCCGGGGCCCCCTGGGCGGGGGTCCCGGGGC < 41bp 1 0.681004156935813 1 0.49571880698204 experiment 0.637991686128375 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210463 chr7:100210447 synonymous SNV . 0 5 hm5C_associated_SNPs_35711 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:100210330-100210458
64251 chr11 108205756 108205756 1 + C T SKCM 108205739 + 108205719 108205759 41 AAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTCGCT AAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTTGCT < 41bp 1 0.021401357729521 1 0.057466983795166 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108205739 chr11:108205756 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_35713 3 0 1 SRSF1 POSTAR2 GSE83923,GSM2221667 chr11:108205740-108205760
64251 chr8 17406287 17406287 1 + G A SKCM 17406301 + 17406281 17406321 41 GTTTGTGAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAG GTTTGTAAAAGGAAATGTGGCAAACTGGAAGATTAGTGAAG < 41bp 1 0.200764804275956 1 0.125482022762299 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17406301 chr8:17406287 synonymous SNV . 0 7 hm5C_associated_SNPs_35714 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:17406285-17406312
64251 chr19 13010515 13010515 1 + C T SKCM 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTTGTTCAGATGTGTTCCTTAAAAAGA < 41bp 1 0.426299906873722 1 0.401756882667542 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010515 synonymous SNV . 0 17 hm5C_associated_SNPs_35715 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:13010482-13010516
64251 chr19 19645929 19645929 1 + C T SKCM 19645936 + 19645916 19645956 41 CAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA CAGTGGGGCTGGTTTGTGCCCGGCACCTGCGGGTGTTTGTA < 41bp 1 0.751412317605319 1 0.438278347253799 experiment 0.497175364789361 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19645936 chr19:19645929 synonymous SNV . 0 14 hm5C_associated_SNPs_35717 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:19645906-19645954
64251 chr10 105172965 105172965 1 + C T SKCM 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACAGCCTGGACGCCCACTCACTCGACTCTCTTGCC < 41bp 1 0.103664420961125 1 0.0678515434265137 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172965 synonymous SNV . 0 28 hm5C_associated_SNPs_35718 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr1 90473056 90473056 1 + C T SKCM 90473036 + 90473016 90473056 41 GGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACTC GGTGGTCGATTTGAGAGCTCCTACCGGAATAGCCTTGACTT < 41bp 1 0.575258361638433 1 0.121148109436035 experiment 0.849483276723133 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473036 chr1:90473056 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_35719 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:90472997-90473067
64251 chr2 27257076 27257076 1 + C T SKCM 27257075 + 27257055 27257095 41 AGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAG AGCCAAAGAAGGTGGCAACTCTTCCCAACCAAAACCAGAAG < 41bp 1 0.264547108039882 1 0.53518158197403 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27257075 chr2:27257076 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_35720 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr2:27257062-27257085
64251 chr19 10793360 10793360 1 + C T SKCM 10793361 + 10793341 10793381 41 CACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGG CACCCCTAGTGCGGCCTTTTCCTCAGATGCCACTGCCGAGG < 41bp 1 0.592460326234451 1 0.236611098051071 experiment 0.815079347531098 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793361 chr19:10793360 nonsynonymous SNV 0.589 0 20 hm5C_associated_SNPs_35721 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10793320-10793360
64251 chr5 5464624 5464624 1 + C A SKCM 5464638 + 5464618 5464658 41 CACTTCCTGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC CACTTCATGTGCCTGGCCGACTCCCACCCTGTGCATCTGGC < 41bp 1 0.166223653299148 1 0.175816923379898 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5464638 chr5:5464624 nonsynonymous SNV 0.992 3 7 hm5C_associated_SNPs_35722 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr5:5464613-5464634
64251 chr6 47577017 47577017 1 + A G SKCM 47577024 + 47577004 47577044 41 TGTTGTGCATTGTAGAAGCACTGAAAAAGGATCACGGGTAA TGTTGTGCATTGTGGAAGCACTGAAAAAGGATCACGGGTAA < 41bp 1 0.714343172671229 1 0.640170395374298 experiment 0.571313654657542 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577024 chr6:47577017 synonymous SNV . 0 14 hm5C_associated_SNPs_35731 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr6 47577017 47577017 1 + A G SKCM 47577036 + 47577016 47577056 41 TAGAAGCACTGAAAAAGGATCACGGGTAAGTAGCCCTTCTT TGGAAGCACTGAAAAAGGATCACGGGTAAGTAGCCCTTCTT < 41bp 1 0.731641318424329 1 0.844411134719849 experiment 0.536717363151342 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577036 chr6:47577017 synonymous SNV . 0 2 hm5C_associated_SNPs_35732 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:47577015-47577039
64251 chr1 44069433 44069433 1 + C T SKCM 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTTGGCAA < 41bp 1 0.359351941732057 1 0.0652247667312622 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069433 synonymous SNV . 0 36 hm5C_associated_SNPs_35733 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:44069421-44069438
64251 chr10 115644101 115644101 1 + C T SKCM 115644100 + 115644080 115644120 41 GAGCAAAAGGAGAACAACAACCCATTAGTTCCCCTTGGGAT GAGCAAAAGGAGAACAACAACTCATTAGTTCCCCTTGGGAT < 41bp 1 0.494833329270593 1 0.326154232025146 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115644100 chr10:115644101 nonsynonymous SNV 0.862 3 22 hm5C_associated_SNPs_35736 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:115644094-115644139
64251 chr16 70562803 70562803 1 + C T SKCM 70562823 + 70562803 70562843 41 CCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC TCCGTGGGAAGATCTTGGAGCTGCTTCGCCCAGACCCCAAC < 41bp 1 0.306111700317482 1 0.108657568693161 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70562823 chr16:70562803 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_35737 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:70562780-70562820
64251 chr19 12924244 12924244 1 + C T SKCM 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCCCCGTTCTTCCCACCGATATTTTCTGGAACG < 41bp 1 0.160812308187658 1 0.0845357775688171 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924244 synonymous SNV . 0 33 hm5C_associated_SNPs_35738 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:12924218-12924250
64251 chr19 12924244 12924244 1 + C T SKCM 12924253 + 12924233 12924273 41 CACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACCAG CACCGATATTTTCTGGAACGCGGCCTGGAGTCAGCAACCAG < 41bp 1 0.561329536460125 1 0.242447227239609 experiment 0.87734092707975 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924253 chr19:12924244 synonymous SNV . 0 12 hm5C_associated_SNPs_35739 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:12924218-12924250
64251 chr1 156756594 156756594 1 + C T SKCM 156756587 + 156756567 156756607 41 TCTTGCCCCTGTTGTGGGCACCACAACCACCACTCCGTCGC TCTTGCCCCTGTTGTGGGCACCACAACTACCACTCCGTCGC < 41bp 1 0.476762319737421 1 0.0929289162158966 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756587 chr1:156756594 synonymous SNV . 0 28 hm5C_associated_SNPs_35740 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756594 156756594 1 + C T SKCM 156756593 + 156756573 156756613 41 CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG CCCTGTTGTGGGCACCACAACTACCACTCCGTCGCCCTCTG < 41bp 1 0.406860600183305 1 0.0841791331768036 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756593 chr1:156756594 synonymous SNV . 0 22 hm5C_associated_SNPs_35741 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756594 156756594 1 + C T SKCM 156756596 + 156756576 156756616 41 TGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGCTA TGTTGTGGGCACCACAACTACCACTCCGTCGCCCTCTGCTA < 41bp 1 0.227477929540242 1 0.0995873510837555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756596 chr1:156756594 synonymous SNV . 0 19 hm5C_associated_SNPs_35742 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr3 47040859 47040859 1 + C T SKCM 47040844 + 47040824 47040864 41 AGAATGAGCGGCTACCTGAGCGGAGCCGCCAGCGCCTCCGG AGAATGAGCGGCTACCTGAGCGGAGCCGCCAGCGCTTCCGG < 41bp 1 0.519446277882381 1 0.879778146743774 experiment 0.961107444235238 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47040844 chr3:47040859 nonsynonymous SNV 0.444 1 36 hm5C_associated_SNPs_35743 0 0 1 NOL12 POSTAR2 ENCODE chr3:47040800-47040893
64251 chr20 48568669 48568669 1 + C T SKCM 48568680 + 48568660 48568700 41 CTCCATCATCGACCAGTGAGCAGAGTCCGTGCTTGCTATCT CTCCATCATTGACCAGTGAGCAGAGTCCGTGCTTGCTATCT < 41bp 1 0.663102196898554 1 0.691442608833313 experiment 0.673795606202892 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF114 ENSG00000124226 CDS Human protein_coding chr20:48568680 chr20:48568669 synonymous SNV . 0 10 hm5C_associated_SNPs_35744 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:48568628-48568673
64251 chr5 179151733 179151733 1 + G A SKCM 179151747 + 179151727 179151767 41 GAGAAGGAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGGA GAGAAGAAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGGA < 41bp 1 0.781825070131269 1 0.54768830537796 experiment 0.436349859737461 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151747 chr5:179151733 nonsynonymous SNV 0.998 0 7 hm5C_associated_SNPs_35745 0 0 28 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179151694-179151744
64251 chr22 46681159 46681159 1 + A C SKCM 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGCC < 41bp 1 0.101608177750926 1 0.276779234409332 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681159 nonsynonymous SNV 0.023 2 40 hm5C_associated_SNPs_35750 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr19 5041226 5041226 1 + C T SKCM 5041241 + 5041221 5041261 41 CCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGA CCGATTTACGGGGCTGACATCAGCGGCTCTTTGTATGATGA < 41bp 1 0.469289732022164 1 0.826545774936676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5041241 chr19:5041226 synonymous SNV . 0 6 hm5C_associated_SNPs_35751 0 0 4 BUD13 POSTAR2 ENCODE chr19:5041142-5041251
64251 chr19 14562718 14562718 1 + G A SKCM 14562705 + 14562685 14562725 41 ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG ACCATCCCGTGGAACCCTACCCCCTCAATGGGGAGACCTGG < 41bp 1 0.117350021018983 1 0.0575518012046814 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562705 chr19:14562718 nonsynonymous SNV 0.054 0 34 hm5C_associated_SNPs_35753 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr19 14562718 14562718 1 + G A SKCM 14562706 + 14562686 14562726 41 CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG CCATCCCGTGGAACCCTACCCCCTCAATGGGGAGACCTGGG < 41bp 1 0.0505227857179753 1 0.251951158046722 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562706 chr19:14562718 nonsynonymous SNV 0.054 0 33 hm5C_associated_SNPs_35754 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr19 14562718 14562718 1 + G A SKCM 14562708 + 14562688 14562728 41 ATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC ATCCCGTGGAACCCTACCCCCTCAATGGGGAGACCTGGGAC < 41bp 1 0.713313296170484 1 0.920813083648682 experiment 0.573373407659032 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562708 chr19:14562718 nonsynonymous SNV 0.054 0 31 hm5C_associated_SNPs_35755 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr10 63850793 63850793 1 + C T SKCM 63850811 + 63850791 63850831 41 TTCCAACAGTGAGAAGGTGGCAGAGGAGGCGGGAGAGAAGG TTTCAACAGTGAGAAGGTGGCAGAGGAGGCGGGAGAGAAGG < 41bp 1 0.753511039110017 1 0.696770429611206 experiment 0.492977921779965 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control ARID5B ENSG00000150347 CDS Human protein_coding chr10:63850811 chr10:63850793 nonsynonymous SNV 0.033 1 3 hm5C_associated_SNPs_35757 0 0 1 RBM22 POSTAR2 ENCODE chr10:63850683-63850811
64251 chr16 14041539 14041539 1 + C T SKCM 14041557 + 14041537 14041577 41 TTCCATCTCTGATCCATCGTCGGGGCATTGACATTGAACCC TTTCATCTCTGATCCATCGTCGGGGCATTGACATTGAACCC < 41bp 1 0.785398124377752 1 0.939283132553101 experiment 0.429203751244497 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ERCC4 ENSG00000175595 CDS Human protein_coding chr16:14041557 chr16:14041539 nonsynonymous SNV 0.994 4 3 hm5C_associated_SNPs_35761 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:14041535-14041561
64251 chr19 11145668 11145668 1 + C T SKCM 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGAGGAGGACGAGCTCTCCTCGTGGATCATCAAGGACG < 41bp 1 0.260598562043196 1 0.160362988710403 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145668 nonsynonymous SNV 0.260 5 20 hm5C_associated_SNPs_35762 0 0 3 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145668 11145668 1 + C T SKCM 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGGAGGACGAGCTCTCCTCGTGGATCATCAAGGACGACG < 41bp 1 0.645792982263466 1 0.643541753292084 experiment 0.708414035473068 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145668 nonsynonymous SNV 0.260 5 17 hm5C_associated_SNPs_35763 0 0 3 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 50906828 50906828 1 + C T SKCM 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTACTTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.083334911327076 1 0.206457853317261 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906828 nonsynonymous SNV 0.976 4 6 hm5C_associated_SNPs_35764 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr12 57619023 57619023 1 + C T SKCM 57619032 + 57619012 57619052 41 AGTGTGTATTTCCGCCACAACTCGTCCAGCCTGGGCAACCT AGTGTGTATTTTCGCCACAACTCGTCCAGCCTGGGCAACCT < 41bp 1 0.547653882843036 1 0.355785846710205 experiment 0.904692234313927 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619032 chr12:57619023 synonymous SNV . 0 12 hm5C_associated_SNPs_35765 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr12:57618999-57619025
64251 chr19 50906827 50906827 1 + C T SKCM 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CGTATCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.0756452236639736 1 0.193235009908676 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906827 synonymous SNV . 0 5 hm5C_associated_SNPs_35767 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr1 154960749 154960749 1 + C T SKCM 154960745 + 154960725 154960765 41 GTCCTCACAGCAGGGGGCATCGGCCCCACTCATGATGATGT GTCCTCACAGCAGGGGGCATCGGCTCCACTCATGATGATGT < 41bp 1 0.63047732746253 1 0.711179375648499 experiment 0.739045345074941 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960745 chr1:154960749 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_35768 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:154960717-154960759
64251 chr20 49196259 49196259 1 + C T SKCM 49196243 + 49196223 49196263 41 CTTGCTGCTCTTTCAAGGATCAGTGGAAGGAGCTTTCCCAC CTTGCTGCTCTTTCAAGGATCAGTGGAAGGAGCTTTTCCAC < 41bp 1 0.561463627977916 1 0.644997179508209 experiment 0.877072744044169 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49196243 chr20:49196259 nonsynonymous SNV 0.993 4 37 hm5C_associated_SNPs_35772 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:49196240-49196264
64251 chr2 27280274 27280274 1 + C T SKCM 27280287 + 27280267 27280307 41 GGCTTTCCCCTCCAGATACACTGTGGAACTATTTGAGCAGG GGCTTTCTCCTCCAGATACACTGTGGAACTATTTGAGCAGG < 41bp 1 0.598669227128437 1 0.492403745651245 experiment 0.802661545743126 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280287 chr2:27280274 nonsynonymous SNV 0.998 4 8 hm5C_associated_SNPs_35774 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27280237-27280281
64251 chr1 156756596 156756596 1 + C T SKCM 156756587 + 156756567 156756607 41 TCTTGCCCCTGTTGTGGGCACCACAACCACCACTCCGTCGC TCTTGCCCCTGTTGTGGGCACCACAACCATCACTCCGTCGC < 41bp 1 0.437907272699264 1 0.0505099892616272 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756587 chr1:156756596 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_35775 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756596 156756596 1 + C T SKCM 156756593 + 156756573 156756613 41 CCCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG CCCTGTTGTGGGCACCACAACCATCACTCCGTCGCCCTCTG < 41bp 1 0.0845598599668207 1 0.184873253107071 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756593 chr1:156756596 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_35776 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr1 156756596 156756596 1 + C T SKCM 156756594 + 156756574 156756614 41 CCTGTTGTGGGCACCACAACCACCACTCCGTCGCCCTCTGC CCTGTTGTGGGCACCACAACCATCACTCCGTCGCCCTCTGC < 41bp 1 0.644005762973705 1 0.474193423986435 experiment 0.711988474052589 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756594 chr1:156756596 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_35777 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:156756584-156756606
64251 chr15 64424071 64424071 1 + C T SKCM 64424067 + 64424047 64424087 41 GCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGT GCTGAGCTCCTGAGTGACTACATTTGCCTCCTGGCCATAGT < 41bp 1 0.124588769954819 1 0.077488511800766 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64424067 chr15:64424071 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_35778 0 0 6 GRWD1 POSTAR2 ENCODE chr15:64424039-64424096
64251 chr5 154174820 154174820 1 + C T SKCM 154174837 + 154174817 154174857 41 ACCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCAC ACCTTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCAC < 41bp 1 0.336651511717221 1 0.638973832130432 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174837 chr5:154174820 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_35782 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154174736-154174820
64251 chr5 154174820 154174820 1 + C T SKCM 154174838 + 154174818 154174858 41 CCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCACT CCTTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCACT < 41bp 1 0.424446622974519 1 0.891297519207001 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174838 chr5:154174820 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_35783 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154174736-154174820
64251 chr14 24567503 24567503 1 + C T SKCM 24567497 + 24567477 24567517 41 CTTCTCAGCGGGACACGGTACAACTCCCGCCTGGTGGGGCC CTTCTCAGCGGGACACGGTACAACTCTCGCCTGGTGGGGCC < 41bp 1 0.645565266926595 1 0.0439099669456482 experiment 0.70886946614681 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCK2 ENSG00000100889 CDS Human protein_coding chr14:24567497 chr14:24567503 nonsynonymous SNV 0.423 1 27 hm5C_associated_SNPs_35788 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:24567502-24567503
64251 chr17 48551159 48551159 1 + G A SKCM 48551147 + 48551127 48551167 41 AGGACTTCTTTCACACACACCCGAAGGTGCAGGAAGTGCAG AGGACTTCTTTCACACACACCCGAAGGTGCAGAAAGTGCAG < 41bp 1 0.401275807748198 1 0.281169652938843 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48551147 chr17:48551159 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_35789 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48551151-48551166
64251 chr16 19460898 19460898 1 + C T SKCM 19460903 + 19460883 19460923 41 TGAAAGTGGTCCTGTCCATGCTTATGGAAACCCACCATTGT TGAAAGTGGTCCTGTTCATGCTTATGGAAACCCACCATTGT < 41bp 1 0.14974518267197 1 0.062269926071167 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMC5 ENSG00000103534 CDS Human protein_coding chr16:19460903 chr16:19460898 synonymous SNV . 0 16 hm5C_associated_SNPs_35791 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:19460872-19460902
64251 chr7 40102466 40102466 1 + C T SKCM 40102465 + 40102445 40102485 41 TAATTACTTTATGGTACCGTCCACCTGAACTGCTACTGGGA TAATTACTTTATGGTACCGTCTACCTGAACTGCTACTGGGA < 41bp 1 0.12286913123727 1 0.256635785102844 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:40102465 chr7:40102466 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_35792 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr7:40102445-40102468
64251 chr5 176519753 176519753 1 + C T SKCM 176519758 + 176519738 176519778 41 ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG ATTCCATCGGCCTCTTCTACCAGTCTGCCTGGCTCACGGTG < 41bp 1 0.328800991472659 1 0.346539735794067 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176519758 chr5:176519753 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_35793 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:176519747-176519775
64251 chr5 167943887 167943887 1 + C T SKCM 167943878 + 167943858 167943898 41 CATAACCGGTTGAATGACTACATCTTCTCCTTTGACAAAAT CATAACCGGTTGAATGACTACATCTTCTCTTTTGACAAAAT < 41bp 1 0.158967113186986 1 0.0727981925010681 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943878 chr5:167943887 synonymous SNV . 0 30 hm5C_associated_SNPs_35795 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167943844-167943892
64251 chr5 167943886 167943886 1 + C T SKCM 167943878 + 167943858 167943898 41 CATAACCGGTTGAATGACTACATCTTCTCCTTTGACAAAAT CATAACCGGTTGAATGACTACATCTTCTTCTTTGACAAAAT < 41bp 1 0.180382461553353 1 0.0742190778255463 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943878 chr5:167943886 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_35796 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167943844-167943892
64251 chr6 44218052 44218052 1 + A G SKCM 44218068 + 44218048 44218088 41 GGAAATTAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGA GGAAGTTAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGA < 41bp 1 0.484066856146706 1 0.6020427942276 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218068 chr6:44218052 nonsynonymous SNV 0.999 0 5 hm5C_associated_SNPs_35798 0 0 65 SRSF1 POSTAR2 GSE83923,GSM2221663 chr6:44218020-44218060
64251 chr1 28600569 28600569 1 + C T SKCM 28600565 + 28600545 28600585 41 CCTCAGCTGACATCCTGGAGCCCTCTCCACACCCAGACATG CCTCAGCTGACATCCTGGAGCCCTTTCCACACCCAGACATG < 41bp 1 0.0345315224914385 1 0.0134443044662476 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28600565 chr1:28600569 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_35799 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:28600551-28600584
64251 chr10 75542922 75542922 1 + C T SKCM 75542932 + 75542912 75542952 41 ACAGAGGTTTCCTAACAAACCTTACCTCAGCTGAAAATGGA ACAGAGGTTTTCTAACAAACCTTACCTCAGCTGAAAATGGA < 41bp 1 0.304368929965186 1 0.0479377806186676 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542932 chr10:75542922 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_35800 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:75542899-75542997
64251 chr10 17276785 17276785 1 + C T SKCM 17276805 + 17276785 17276825 41 CTCACCTGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC TTCACCTGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC < 41bp 1 0.140617227849125 1 0.02639240026474 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276805 chr10:17276785 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_35801 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr22 24573553 24573553 1 + C A SKCM 24573545 + 24573525 24573565 41 AGTGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAG AGTGAGACTCAGCCCCTGAGCTCTCCCCAAACAGCTGCCAG < 41bp 1 0.0928286032590255 1 0.329304128885269 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573545 chr22:24573553 nonsynonymous SNV 0.006 0 29 hm5C_associated_SNPs_35803 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573553 24573553 1 + C A SKCM 24573547 + 24573527 24573567 41 TGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCT TGAGACTCAGCCCCTGAGCTCTCCCCAAACAGCTGCCAGCT < 41bp 1 0.145565554658435 1 0.170837581157684 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573547 chr22:24573553 nonsynonymous SNV 0.006 0 27 hm5C_associated_SNPs_35804 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573553 24573553 1 + C A SKCM 24573549 + 24573529 24573569 41 AGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCC AGACTCAGCCCCTGAGCTCTCCCCAAACAGCTGCCAGCTCC < 41bp 1 0.482193181140469 1 0.78583037853241 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573549 chr22:24573553 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_35805 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573553 24573553 1 + C A SKCM 24573550 + 24573530 24573570 41 GACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCA GACTCAGCCCCTGAGCTCTCCCCAAACAGCTGCCAGCTCCA < 41bp 1 0.155913881926276 1 0.25283545255661 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573550 chr22:24573553 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_35806 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573553 24573553 1 + C A SKCM 24573551 + 24573531 24573571 41 ACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCAA ACTCAGCCCCTGAGCTCTCCCCAAACAGCTGCCAGCTCCAA < 41bp 1 0.199451425178584 1 0.225923597812653 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573551 chr22:24573553 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_35807 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr1 16056393 16056393 1 + C T SKCM 16056373 + 16056353 16056393 41 AGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGC AGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGT < 41bp 1 0.37731843160711 1 0.428626507520676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056373 chr1:16056393 nonsynonymous SNV 0.999 2 41 hm5C_associated_SNPs_35809 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:16056384-16056410
64251 chr19 10893729 10893729 1 + C T SKCM 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTCTTCCTCTTCCACCCGGCCTA < 41bp 1 0.183291024434747 1 0.0450520515441895 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893729 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_35811 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr8 145065438 145065438 1 + C T SKCM 145065439 + 145065419 145065459 41 TCTGGGGACAACTATCCTCCCCCCAACCCTGGATATCCGGG TCTGGGGACAACTATCCTCTCCCCAACCCTGGATATCCGGG < 41bp 1 0.45757055760428 1 0.326483428478241 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065439 chr8:145065438 nonsynonymous SNV 0.866 1 20 hm5C_associated_SNPs_35812 0 0 22 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:145065403-145065439
64251 chr1 29618381 29618381 1 + G A SKCM 29618385 + 29618365 29618405 41 CAACCCCCCTCTCCAGGAAGCCGGTGAACATGACCAAGGCC CAACCCCCCTCTCCAGAAAGCCGGTGAACATGACCAAGGCC < 41bp 1 0.184426198021525 1 0.332224011421204 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPRU ENSG00000060656 CDS Human protein_coding chr1:29618385 chr1:29618381 synonymous SNV . 0 17 hm5C_associated_SNPs_35815 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:29618380-29618400
64251 chr1 53420459 53420459 1 + G A SKCM 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGAAGATGAGTAAGAGAAGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.380366427789526 1 0.106358379125595 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420459 nonsynonymous SNV 0.714 5 15 hm5C_associated_SNPs_35816 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr8 42977920 42977920 1 + C T SKCM 42977935 + 42977915 42977955 41 GACTCCCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA GACTCTCTCAGAAAGACCCACTGCCCAGGACGTTCTGGAGA < 41bp 1 0.300876848467658 1 0.0934750139713287 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POMK ENSG00000185900 CDS Human protein_coding chr8:42977935 chr8:42977920 nonsynonymous SNV 0.862 2 6 hm5C_associated_SNPs_35817 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977840-42978000
64251 chr18 3457604 3457604 1 + C T SKCM 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATTCCCGGGATCAGTTTTGGCTCGTCCATCAG < 41bp 1 0.278471995770766 1 0.0554702579975128 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457604 nonsynonymous SNV 0.010 2 12 hm5C_associated_SNPs_35818 1 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457604 3457604 1 + C T SKCM 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATTCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.663536416739039 1 0.243398427963257 experiment 0.672927166521923 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457604 nonsynonymous SNV 0.010 2 3 hm5C_associated_SNPs_35819 1 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr22 41742206 41742206 1 + C T SKCM 41742194 + 41742174 41742214 41 CTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT CTGAAGGAGCACCAGGGCATCTTCACCTTCCTTTGCGAGGT < 41bp 1 0.346711094264557 1 0.227468639612198 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41742194 chr22:41742206 synonymous SNV . 0 33 hm5C_associated_SNPs_35820 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:41742176-41742208
64251 chr6 11566004 11566004 1 + G A SKCM 11565991 + 11565971 11566011 41 TGTTTGTGATGCTGCAGAGGCATAGGCAGGGAAGAGTCATC TGTTTGTGATGCTGCAGAGGCATAGGCAGGGAAAAGTCATC < 41bp 1 0.333743372063491 1 0.370188176631927 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMEM170B ENSG00000205269 CDS Human protein_coding chr6:11565991 chr6:11566004 nonsynonymous SNV 0.994 3 34 hm5C_associated_SNPs_35822 0 0 1 DDX3X POSTAR2 ENCODE chr6:11565920-11566074
64251 chr10 104140992 104140992 1 + C T SKCM 104141008 + 104140988 104141028 41 ATTCCATCTGAGCTGGGGGCCTGTGGTGAGTCTCTCTAGCC ATTCTATCTGAGCTGGGGGCCTGTGGTGAGTCTCTCTAGCC < 41bp 1 0.308840490901582 1 0.277062386274338 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104141008 chr10:104140992 nonsynonymous SNV 0.155 4 5 hm5C_associated_SNPs_35823 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:104140987-104141010
64251 chr17 73489155 73489155 1 + C T SKCM 73489149 + 73489129 73489169 41 CGGCGGCCTCCCCTCAGCCACATGATCAGCCTCTTCATTAA CGGCGGCCTCCCCTCAGCCACATGATTAGCCTCTTCATTAA < 41bp 1 0.56523365732328 1 0.118045926094055 experiment 0.86953268535344 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73489149 chr17:73489155 synonymous SNV . 0 27 hm5C_associated_SNPs_35824 0 0 1 GRWD1 POSTAR2 ENCODE chr17:73489152-73489217
64251 chr22 39918129 39918129 1 + G A SKCM 39918115 + 39918095 39918135 41 CTGGGCAGTGAAGTGGATATCACTGAAGGAGATAGGAAGCC CTGGGCAGTGAAGTGGATATCACTGAAGGAGATAAGAAGCC < 41bp 1 0.632860483935855 1 0.176894456148148 experiment 0.73427903212829 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918115 chr22:39918129 nonsynonymous SNV 0.696 0 35 hm5C_associated_SNPs_35825 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918000-39918173
64251 chr19 50334627 50334627 1 + C T SKCM 50334624 + 50334604 50334644 41 CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAG CCCAGGAGGGGTGAGCGGCCCTTTCCCAGCCCAGCTGGGAG < 41bp 1 0.111226734850244 1 0.144455015659332 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334624 chr19:50334627 nonsynonymous SNV 0.546 3 24 hm5C_associated_SNPs_35826 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr19 50334627 50334627 1 + C T SKCM 50334629 + 50334609 50334649 41 GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA GAGGGGTGAGCGGCCCTTTCCCAGCCCAGCTGGGAGCCCCA < 41bp 1 0.446411054964924 1 0.354237854480743 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334629 chr19:50334627 nonsynonymous SNV 0.546 3 19 hm5C_associated_SNPs_35827 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr2 3628410 3628410 1 + G A SKCM 3628408 + 3628388 3628428 41 CTTGTAGGTTGAAACTTTTTCTGGTGTCTATAAGAAGCTCA CTTGTAGGTTGAAACTTTTTCTAGTGTCTATAAGAAGCTCA < 41bp 1 0.611770411232202 1 0.450003325939178 experiment 0.776459177535595 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3628408 chr2:3628410 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_35828 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:3628353-3628418
64251 chr19 50334628 50334628 1 + C T SKCM 50334624 + 50334604 50334644 41 CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAG CCCAGGAGGGGTGAGCGGCCCTTCTCCAGCCCAGCTGGGAG < 41bp 1 0.303975215512136 1 0.143127143383026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334624 chr19:50334628 synonymous SNV . 0 25 hm5C_associated_SNPs_35829 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr19 50334628 50334628 1 + C T SKCM 50334629 + 50334609 50334649 41 GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA GAGGGGTGAGCGGCCCTTCTCCAGCCCAGCTGGGAGCCCCA < 41bp 1 0.534540479953958 1 0.850487768650055 experiment 0.930919040092084 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334629 chr19:50334628 synonymous SNV . 0 20 hm5C_associated_SNPs_35830 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr9 2186140 2186140 1 + C T SKCM 2186154 + 2186134 2186174 41 GAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG GAGTGCTCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG < 41bp 1 0.207268360258316 1 0.0807017982006073 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186154 chr9:2186140 synonymous SNV . 0 7 hm5C_associated_SNPs_35832 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:2186132-2186159
64251 chr9 2186140 2186140 1 + C T SKCM 2186155 + 2186135 2186175 41 AGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGGA AGTGCTCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGGA < 41bp 1 0.32472089701934 1 0.749306559562683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186155 chr9:2186140 synonymous SNV . 0 6 hm5C_associated_SNPs_35833 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:2186132-2186159
64251 chr17 37358611 37358611 1 + C T SKCM 37358628 + 37358608 37358648 41 ATCCGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG ATCTGCAAGCCTGTGACGGTCCATTCCCGGGCTCGATGCCG < 41bp 1 0.111213877073784 1 0.0311409831047058 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358628 chr17:37358611 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_35835 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:37358570-37358613
64251 chr22 39918130 39918130 1 + G A SKCM 39918115 + 39918095 39918135 41 CTGGGCAGTGAAGTGGATATCACTGAAGGAGATAGGAAGCC CTGGGCAGTGAAGTGGATATCACTGAAGGAGATAGAAAGCC < 41bp 1 0.642404433454514 1 0.117468178272247 experiment 0.715191133090972 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918115 chr22:39918130 synonymous SNV . 0 36 hm5C_associated_SNPs_35836 0 0 67 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918000-39918173
64251 chr5 156816271 156816271 1 + C T SKCM 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTTATCCTGAC < 41bp 1 0.30486518023196 1 0.412791758775711 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816271 synonymous SNV . 0 33 hm5C_associated_SNPs_35837 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr9 139734209 139734209 1 + C T SKCM 139734201 + 139734181 139734221 41 GACTGACGAGGATGAGGGCCCTGCCGAGCCGCCCCCACCCC GACTGACGAGGATGAGGGCCCTGCCGAGTCGCCCCCACCCC < 41bp 1 0.465703750497108 1 0.227111279964447 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734201 chr9:139734209 nonsynonymous SNV 0.006 1 29 hm5C_associated_SNPs_35838 0 0 6 FXR2 POSTAR2 ENCODE chr9:139734176-139734236
64251 chr18 9954086 9954086 1 + G A SKCM 9954099 + 9954079 9954119 41 ACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCA ACATTCGAATAAACCTGGATCAACCTCAACTGCATCCTTCA < 41bp 1 0.235967652387614 1 0.186499148607254 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VAPA ENSG00000101558 CDS Human protein_coding chr18:9954099 chr18:9954086 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_35840 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9954040-9954099
64251 chr19 50158053 50158053 1 + C T SKCM 50158043 + 50158023 50158063 41 CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCT CTGGGGGGCTGCGGTTCGACCCCCCCCACCTCCACCGGGCT < 41bp 1 0.101486431350166 1 0.100111544132233 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158043 chr19:50158053 nonsynonymous SNV 0.993 2 31 hm5C_associated_SNPs_35852 0 0 2 GRWD1 POSTAR2 ENCODE chr19:50158021-50158063
64251 chr12 6644008 6644008 1 + G A SKCM 6643991 + 6643971 6644011 41 CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAGGTGA CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAGATGA < 41bp 1 0.224732193875575 1 0.250742375850677 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6643991 chr12:6644008 nonsynonymous SNV 0.591 1 38 hm5C_associated_SNPs_35867 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:6643973-6644010
64251 chr1 237052585 237052585 1 + G A SKCM 237052594 + 237052574 237052614 41 GGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAG GGCAGCTCCGGAGCAAGTACCCGAATCGAGGCTTTCCCAAG < 41bp 1 0.452386452071517 1 0.809024155139923 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 CDS Human protein_coding chr1:237052594 chr1:237052585 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_35868 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:237052565-237052587
64251 chr12 6644007 6644007 1 + G A SKCM 6643991 + 6643971 6644011 41 CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAGGTGA CGCAGCCGAGCCACATCGCTCAGACACCATGGGGAAAGTGA < 41bp 1 0.208783132982108 1 0.209500402212143 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6643991 chr12:6644007 synonymous SNV . 0 37 hm5C_associated_SNPs_35869 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:6643973-6644010
64251 chr1 237052584 237052584 1 + G A SKCM 237052594 + 237052574 237052614 41 GGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAG GGCAGCTCCGAGGCAAGTACCCGAATCGAGGCTTTCCCAAG < 41bp 1 0.493065297729144 1 0.684414386749268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTR ENSG00000116984 CDS Human protein_coding chr1:237052594 chr1:237052584 synonymous SNV . 0 11 hm5C_associated_SNPs_35873 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:237052565-237052587
64251 chr1 109643094 109643094 1 + C T SKCM 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCTCTT < 41bp 1 0.677986001820513 1 0.10652169585228 experiment 0.644027996358974 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643094 . . 0 38 hm5C_associated_SNPs_35875 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643094 109643094 1 + C T SKCM 109643087 + 109643067 109643107 41 CCCCTCGGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGC CCCCTCGGGGCGCTGTGCAGCGAGGCCTCTTAGGCGGCGGC < 41bp 1 0.771911582922038 1 0.90614253282547 experiment 0.456176834155924 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643087 chr1:109643094 . . 0 28 hm5C_associated_SNPs_35876 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643094 109643094 1 + C T SKCM 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGGGCGCTGTGCAGCGAGGCCTCTTAGGCGGCGGCCACGCT < 41bp 1 0.331677707004902 1 0.0804886519908905 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643094 . . 0 22 hm5C_associated_SNPs_35877 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643094 109643094 1 + C T SKCM 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT GGCGCTGTGCAGCGAGGCCTCTTAGGCGGCGGCCACGCTGT < 41bp 1 0.748969503763606 1 0.222226709127426 experiment 0.502060992472788 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643094 . . 0 20 hm5C_associated_SNPs_35878 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643094 109643094 1 + C T SKCM 109643104 + 109643084 109643124 41 CAGCGAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA CAGCGAGGCCTCTTAGGCGGCGGCCACGCTGTGGTCCCCGA < 41bp 1 0.677677870804307 1 0.697206258773804 experiment 0.644644258391386 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643104 chr1:109643094 . . 0 11 hm5C_associated_SNPs_35879 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643094 109643094 1 + C T SKCM 109643108 + 109643088 109643128 41 GAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC GAGGCCTCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC < 41bp 1 0.636504892656151 1 0.523428320884705 experiment 0.726990214687698 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643108 chr1:109643094 . . 0 7 hm5C_associated_SNPs_35880 0 0 41 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr19 36572471 36572471 1 + A G SKCM 36572466 + 36572446 36572486 41 CACTGGCAGAAAAACATCTTCAGCAATGTGAGTGGCTTCCT CACTGGCAGAAAAACATCTTCAGCAGTGTGAGTGGCTTCCT < 41bp 1 0.597472992747058 1 0.333958983421326 experiment 0.805054014505883 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36572466 chr19:36572471 nonsynonymous SNV 0.998 0 26 hm5C_associated_SNPs_35881 0 0 5 GRWD1 POSTAR2 ENCODE chr19:36572365-36572475
64251 chr1 24996708 24996708 1 + C T SKCM 24996688 + 24996668 24996708 41 CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTT < 41bp 1 0.596998037294697 1 0.558761775493622 experiment 0.806003925410605 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996688 chr1:24996708 nonsynonymous SNV 0.879 1 41 hm5C_associated_SNPs_35882 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996696 + 24996676 24996716 41 CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCC CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTTCATCCCCC < 41bp 1 0.374070831771195 1 0.123581379652023 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996696 chr1:24996708 nonsynonymous SNV 0.879 1 33 hm5C_associated_SNPs_35883 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996697 + 24996677 24996717 41 TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTTCATCCCCCG < 41bp 1 0.702010800107113 1 0.215652406215668 experiment 0.595978399785773 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996697 chr1:24996708 nonsynonymous SNV 0.879 1 32 hm5C_associated_SNPs_35884 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996698 + 24996678 24996718 41 GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT GAGCCAGCAGCTAAAAAGCCCCCAGCACCTTCATCCCCCGT < 41bp 1 0.178289647476384 1 0.0867903232574463 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996698 chr1:24996708 nonsynonymous SNV 0.879 1 31 hm5C_associated_SNPs_35885 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996703 + 24996683 24996723 41 AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT AGCAGCTAAAAAGCCCCCAGCACCTTCATCCCCCGTCCAGT < 41bp 1 0.322160037678875 1 0.0943574905395508 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996703 chr1:24996708 nonsynonymous SNV 0.879 1 26 hm5C_associated_SNPs_35886 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT CAGCTAAAAAGCCCCCAGCACCTTCATCCCCCGTCCAGTCT < 41bp 1 0.0213024389381381 1 0.0170466303825378 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996708 nonsynonymous SNV 0.879 1 24 hm5C_associated_SNPs_35887 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996706 + 24996686 24996726 41 AGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTC AGCTAAAAAGCCCCCAGCACCTTCATCCCCCGTCCAGTCTC < 41bp 1 0.700327496639937 1 0.242478460073471 experiment 0.599345006720125 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996706 chr1:24996708 nonsynonymous SNV 0.879 1 23 hm5C_associated_SNPs_35888 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr1 24996708 24996708 1 + C T SKCM 24996709 + 24996689 24996729 41 TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT TAAAAAGCCCCCAGCACCTTCATCCCCCGTCCAGTCTCAGT < 41bp 1 0.0782109801478335 1 0.0286351144313812 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996709 chr1:24996708 nonsynonymous SNV 0.879 1 20 hm5C_associated_SNPs_35889 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24996693-24996740
64251 chr7 101892184 101892184 1 + C T SKCM 101892198 + 101892178 101892218 41 CCTTTTCGGCCTCCCCGAGGCCGCGGGCGCCCGGGACTCGC CCTTTTTGGCCTCCCCGAGGCCGCGGGCGCCCGGGACTCGC < 41bp 1 0.280007872308567 1 0.485862463712692 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101892198 chr7:101892184 synonymous SNV . 0 7 hm5C_associated_SNPs_35890 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:101892180-101892200
64251 chr1 109643093 109643093 1 + C T SKCM 109643077 + 109643057 109643097 41 CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCCCCTT CCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCGAGGCTCCTT < 41bp 1 0.681394627851201 1 0.086359441280365 experiment 0.637210744297598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643077 chr1:109643093 . . 0 37 hm5C_associated_SNPs_35891 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643093 109643093 1 + C T SKCM 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT GGCGCTGTGCAGCGAGGCTCCTTAGGCGGCGGCCACGCTGT < 41bp 1 0.701641893708124 1 0.215083330869675 experiment 0.596716212583752 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643093 . . 0 19 hm5C_associated_SNPs_35892 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643093 109643093 1 + C T SKCM 109643104 + 109643084 109643124 41 CAGCGAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA CAGCGAGGCTCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA < 41bp 1 0.699145371079498 1 0.679591655731201 experiment 0.601709257841004 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643104 chr1:109643093 . . 0 10 hm5C_associated_SNPs_35893 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643093 109643093 1 + C T SKCM 109643108 + 109643088 109643128 41 GAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC GAGGCTCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC < 41bp 1 0.661429430404133 1 0.645631790161133 experiment 0.677141139191735 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643108 chr1:109643093 . . 0 6 hm5C_associated_SNPs_35894 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr16 28842289 28842289 1 + C T SKCM 28842286 + 28842266 28842306 41 AAAAAAAAACCAAACAGGCCCTTCCCGCATGTCCCCAAAGG AAAAAAAAACCAAACAGGCCCTTTCCGCATGTCCCCAAAGG < 41bp 1 0.0112919769222772 1 0.101621359586716 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28842286 chr16:28842289 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_35895 0 0 4 EIF3H POSTAR2 ENCODE chr16:28842282-28842293
64251 chr19 39870640 39870640 1 + C T SKCM 39870630 + 39870610 39870650 41 TCACGGAGACGCAGAAGAAACGGCTGCTATCCTGGAAACAG TCACGGAGACGCAGAAGAAACGGCTGCTATTCTGGAAACAG < 41bp 1 0.595466132117231 1 0.412361443042755 experiment 0.809067735765538 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39870630 chr19:39870640 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_35896 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39870626-39870654
64251 chr7 133164816 133164816 1 + C T SKCM 133164812 + 133164792 133164832 41 GTTTCTCTGCAGGTTCGAATCGTCCTCCCATGCCATCAGTA GTTTCTCTGCAGGTTCGAATCGTCTTCCCATGCCATCAGTA < 41bp 1 0.312694460648564 1 0.140977591276169 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164812 chr7:133164816 synonymous SNV . 0 25 hm5C_associated_SNPs_35898 0 0 7 DDX24 POSTAR2 ENCODE chr7:133164803-133164862
64251 chr7 27211522 27211522 1 - G A SKCM 27211542 - 27211522 27211562 41 GAAAACCGGATCCGGGAGCTCACAGCCAACTTTAATTTTTC GAAAACCGGATCCGGGAGCTCACAGCCAACTTTAATTTTTT < 41bp 1 0.178991771093579 1 0.184329599142075 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXA10 ENSG00000253293 CDS Human protein_coding chr7:27211542 chr7:27211522 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_35899 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:27211459-27211571
64251 chrX 23802000 23802000 1 + G A SKCM 23802013 + 23801993 23802033 41 TCCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA TCCGGAAAGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA < 41bp 1 0.0260843815599808 1 0.0910309255123138 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066 CDS Human protein_coding chrX:23802013 chrX:23802000 nonsynonymous SNV 0.984 3 8 hm5C_associated_SNPs_35901 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chrX 23802000 23802000 1 + G A SKCM 23802014 + 23801994 23802034 41 CCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC CCGGAAAGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC < 41bp 1 0.0468044789746758 1 0.0809257626533508 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066 CDS Human protein_coding chrX:23802014 chrX:23802000 nonsynonymous SNV 0.984 3 7 hm5C_associated_SNPs_35902 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chrX 23802001 23802001 1 + G A SKCM 23802013 + 23801993 23802033 41 TCCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA TCCGGAAGATAACCCCTCGCCCTTTCCAGAAGCCAGAGAGA < 41bp 1 0.0229686250381163 1 0.0972665548324585 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066;ENSG00000130066 exonic;splicing Human other chrX:23802013 chrX:23802001 nonsynonymous SNV 0.985 4 9 hm5C_associated_SNPs_35903 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chrX 23802001 23802001 1 + G A SKCM 23802014 + 23801994 23802034 41 CCGGAAGGTAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC CCGGAAGATAACCCCTCGCCCTTTCCAGAAGCCAGAGAGAC < 41bp 1 0.0365012874671654 1 0.0567684769630432 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAT1 ENSG00000130066;ENSG00000130066 exonic;splicing Human other chrX:23802014 chrX:23802001 nonsynonymous SNV 0.985 4 8 hm5C_associated_SNPs_35904 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chr22 41735126 41735126 1 + C T SKCM 41735129 + 41735109 41735149 41 AGGACCCTCCCCAGCACCGACAGCCTGGATGACTTCTCAGA AGGACCCTCCCCAGCACTGACAGCCTGGATGACTTCTCAGA < 41bp 1 0.31473832999766 1 0.0977351069450378 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735129 chr22:41735126 synonymous SNV . 0 18 hm5C_associated_SNPs_35905 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41735126-41735183
64251 chr3 142422804 142422804 1 + C T SKCM 142422814 + 142422794 142422834 41 GAAGGGAATTCAACACTTACCCTGGCATTGGTATGGCAGCT GAAGGGAATTTAACACTTACCCTGGCATTGGTATGGCAGCT < 41bp 1 0.33394922806818 1 0.141684800386429 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLS1 ENSG00000120756 CDS Human protein_coding chr3:142422814 chr3:142422804 nonsynonymous SNV 0.971 1 11 hm5C_associated_SNPs_35906 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:142422792-142422821
64251 chr11 62502871 62502871 1 + G T SKCM 62502861 + 62502841 62502881 41 TTTGGCCCATTAGCTTGTCTCCTTCAGATGGAGCCCGTGAA TTTGGCCCATTAGCTTGTCTCCTTCAGATGTAGCCCGTGAA < 41bp 1 0.0291277899407806 1 0.0454441905021667 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC9C ENSG00000162222 CDS Human protein_coding chr11:62502861 chr11:62502871 stopgain 1.000 0 31 hm5C_associated_SNPs_35907 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:62502860-62502880
64251 chr17 40931081 40931081 1 + C T SKCM 40931095 + 40931075 40931115 41 CAAGTTCTTCTAGCAGGGACCTGTCTCCCTTTACTTCTTAC CAAGTTTTTCTAGCAGGGACCTGTCTCCCTTTACTTCTTAC < 41bp 1 0.152034032343344 1 0.0759664475917816 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS25 ENSG00000131475 CDS Human protein_coding chr17:40931095 chr17:40931081 synonymous SNV . 0 7 hm5C_associated_SNPs_35910 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:40931059-40931110
64251 chr22 31673078 31673078 1 + G A SKCM 31673093 + 31673073 31673113 41 CTGCTGGACAAGATCCGGGCCATGCAGAAGCTGAGCACACC CTGCTAGACAAGATCCGGGCCATGCAGAAGCTGAGCACACC < 41bp 1 0.063471956255169 1 0.0346143245697021 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31673093 chr22:31673078 synonymous SNV . 0 6 hm5C_associated_SNPs_35911 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:31673046-31673079
64251 chr12 112229121 112229121 1 + C T SKCM 112229119 + 112229099 112229139 41 TTTGCTCACAGGCTGGCTTTCCCCCTGGTGTGGTCAACATT TTTGCTCACAGGCTGGCTTTCCTCCTGGTGTGGTCAACATT < 41bp 1 0.0657486936482876 1 0.0345618426799774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229119 chr12:112229121 synonymous SNV . 0 23 hm5C_associated_SNPs_35912 0 0 4 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr15 44673158 44673158 1 + C T SKCM 44673143 + 44673123 44673163 41 CTAAAGCAGGCTACCAAGGACAGAGTCAGTGATTTCCATAA CTAAAGCAGGCTACCAAGGACAGAGTCAGTGATTTTCATAA < 41bp 1 0.455119288579309 1 0.382098495960236 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CASC4 ENSG00000166734 CDS Human protein_coding chr15:44673143 chr15:44673158 synonymous SNV . 0 36 hm5C_associated_SNPs_35913 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:44673135-44673161
64251 chr6 7231545 7231545 1 + C T SKCM 7231530 + 7231510 7231550 41 GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATCATCTC GAAGAGCTGCCCCCGCTGGCCTCCATTGCCCAGATTATCTC < 41bp 1 0.587272426032519 1 0.947520852088928 experiment 0.825455147934962 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231530 chr6:7231545 synonymous SNV . 0 36 hm5C_associated_SNPs_35916 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:7231542-7231564
64251 chr6 31637197 31637197 1 + G T SKCM 31637187 + 31637167 31637207 41 AAGTCATCAAGACACCATCACACGGATGGCGCCTACTTCGG AAGTCATCAAGACACCATCACACGGATGGCTCCTACTTCGG < 41bp 1 0.746588527129206 1 0.0603230595588684 experiment 0.506822945741587 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CSNK2B ENSG00000204435;ENSG00000263020 CDS Human other chr6:31637187 chr6:31637197 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_35917 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:31637157-31637209
64251 chr20 330383 330383 1 + C T SKCM 330392 + 330372 330412 41 CTGCACCTCTTCTATGAGGACTGTGCAGGCACTGCTCTCAG CTGCACCTCTTTTATGAGGACTGTGCAGGCACTGCTCTCAG < 41bp 1 0.323045336471419 1 0.0420265793800354 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330392 chr20:330383 synonymous SNV . 0 12 hm5C_associated_SNPs_35918 0 0 1 DDX3X POSTAR2 ENCODE chr20:330361-330432
64251 chr22 38870562 38870562 1 + C T SKCM 38870544 + 38870524 38870564 41 ACAGGCATCTCTGGGAAGAGCCAGATCCTGTTTGCTCTCGT ACAGGCATCTCTGGGAAGAGCCAGATCCTGTTTGCTCTTGT < 41bp 1 0.740898682196074 1 0.224398165941238 experiment 0.518202635607852 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38870544 chr22:38870562 synonymous SNV . 0 39 hm5C_associated_SNPs_35919 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:38870543-38870589
64251 chr22 42280854 42280854 1 + C T SKCM 42280873 + 42280853 42280893 41 TCCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT TTCTGCAGGATCCGCCTGTTCCGATGTACACATGGCGTTGT < 41bp 1 0.313488439672517 1 0.138618797063828 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42280873 chr22:42280854 nonsynonymous SNV 0.992 0 2 hm5C_associated_SNPs_35921 0 0 1 BUD13 POSTAR2 ENCODE chr22:42280843-42280888
64251 chr11 44193276 44193276 1 + A G SKCM 44193285 + 44193265 44193305 41 TGAAGAATGGAATGACCCTCCTGCTGTGGTAAGTGAATTCC TGAAGAATGGAGTGACCCTCCTGCTGTGGTAAGTGAATTCC < 41bp 1 0.639376931553477 1 0.230670571327209 experiment 0.721246136893047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44193285 chr11:44193276 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_35922 0 0 3 DDX24 POSTAR2 ENCODE chr11:44193220-44193276
64251 chr1 57161681 57161681 1 + C T SKCM 57161696 + 57161676 57161716 41 CCCTCCCATTTGATGATGAGCATGTACCTACGTTATTTAAG CCCTCTCATTTGATGATGAGCATGTACCTACGTTATTTAAG < 41bp 1 0.173626941717873 1 0.0320091247558594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57161696 chr1:57161681 nonsynonymous SNV 0.998 4 6 hm5C_associated_SNPs_35923 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:57161668-57161706
64251 chr1 220970049 220970049 1 + T C SKCM 220970029 + 220970009 220970049 41 CAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCT CAGGGACTGTGGCGAGGCCACCGCCCAGTGGATAACCAGCC < 41bp 1 0.293346573418661 1 0.180059134960175 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220970029 chr1:220970049 nonsynonymous SNV 0.482 1 41 hm5C_associated_SNPs_35924 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:220970049-220970050
64251 chr6 44219205 44219205 1 + C T SKCM 44219187 + 44219167 44219207 41 GTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCCCGA GTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCCTGA < 41bp 1 0.339377057810934 1 0.101534873247147 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219187 chr6:44219205 stopgain 0.997 0 39 hm5C_associated_SNPs_35926 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:44219157-44219206
64251 chrX 106884133 106884133 1 + G A SKCM 106884134 + 106884114 106884154 41 TTCCTCCCCTCCATTTAGAGCCGGGCGCCAATCTCAGCCAA TTCCTCCCCTCCATTTAGAACCGGGCGCCAATCTCAGCCAA < 41bp 1 0.481214341267604 1 0.823302328586578 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106884134 chrX:106884133 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_35927 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:106884101-106884133
64251 chrX 106884133 106884133 1 + G A SKCM 106884139 + 106884119 106884159 41 CCCCTCCATTTAGAGCCGGGCGCCAATCTCAGCCAAGCTTG CCCCTCCATTTAGAACCGGGCGCCAATCTCAGCCAAGCTTG < 41bp 1 0.597751967237125 1 0.122618794441223 experiment 0.804496065525749 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106884139 chrX:106884133 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_35928 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:106884101-106884133
64251 chr20 37632434 37632434 1 + C T SKCM 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTTGAGCACT < 41bp 1 0.340026577590314 1 0.0509116053581238 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632434 stopgain 0.850 1 34 hm5C_associated_SNPs_35929 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:37632381-37632471
64251 chr6 44219204 44219204 1 + C T SKCM 44219187 + 44219167 44219207 41 GTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCCCGA GTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCTCGA < 41bp 1 0.3440503467081 1 0.114313185214996 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219187 chr6:44219204 synonymous SNV . 0 38 hm5C_associated_SNPs_35930 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:44219157-44219206
64251 chr9 130965819 130965819 1 + G A SKCM 130965827 + 130965807 130965847 41 TTCTCTGCCATCGGCCAGAACGCGGACCTCGACCTGCCGCA TTCTCTGCCATCAGCCAGAACGCGGACCTCGACCTGCCGCA < 41bp 1 0.769883558036435 1 0.909059703350067 experiment 0.46023288392713 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:130965827 chr9:130965819 nonsynonymous SNV 0.998 3 13 hm5C_associated_SNPs_35932 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:130965786-130965824
64251 chr1 57157100 57157100 1 + T C SKCM 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTCAT < 41bp 1 0.0544587118939268 1 0.120382726192474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157100 synonymous SNV . 0 39 hm5C_associated_SNPs_35933 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:57157090-57157128
64251 chrX 73045207 73045207 1 - C T SKCM 73045203 - 73045183 73045223 41 TGTGGATACAAAGAAAGGAGCAAGCATAAAAAAGTGCTCTT TGTGGATACAAAGAAAAGAGCAAGCATAAAAAAGTGCTCTT < 41bp 1 0.203834677162429 1 0.616791844367981 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045203 chrX:73045207 . . 0 17 hm5C_associated_SNPs_35938 0 0 66 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045207 73045207 1 - C T SKCM 73045215 - 73045195 73045235 41 TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA TGTGATAAGCGTTGTGGATACAAAGAAAAGAGCAAGCATAA < 41bp 1 0.303527888664693 1 0.564899682998657 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045215 chrX:73045207 . . 0 29 hm5C_associated_SNPs_35939 0 0 66 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr11 46392868 46392868 1 + C T SKCM 46392886 + 46392866 46392906 41 TTCCAGCAGAAGTTCACCTTCCACAGCAAGGAGATTGTGGC TTTCAGCAGAAGTTCACCTTCCACAGCAAGGAGATTGTGGC < 41bp 1 0.30880332866272 1 0.452838480472565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46392886 chr11:46392868 synonymous SNV . 0 3 hm5C_associated_SNPs_35940 0 0 3 DDX24 POSTAR2 ENCODE chr11:46392855-46392885
64251 chr6 26204982 26204982 1 + G A SKCM 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCATCCGGCACCTTGCTCGTCGCGG < 41bp 1 0.511027025263821 1 0.89104437828064 experiment 0.977945949472358 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204982 nonsynonymous SNV 0.022 0 26 hm5C_associated_SNPs_35941 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr8 9567517 9567517 1 + T G SKCM 9567508 + 9567488 9567528 41 TCCCAAACGTAAACAAGTGACAGAATTGTTACTTAGAAAAG TCCCAAACGTAAACAAGTGACAGAATTGTGACTTAGAAAAG < 41bp 1 0.41988840923392 1 0.334607779979706 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9567508 chr8:9567517 stopgain 0.964 1 30 hm5C_associated_SNPs_35947 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:9567499-9567525
64251 chr6 7583132 7583132 1 + G A SKCM 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAGGAGGAGGCTATTAGAAAGATAGAATCGG < 41bp 1 0.0650343659331593 1 0.0946426689624786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583132 synonymous SNV . 0 28 hm5C_associated_SNPs_35948 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr22 42273342 42273342 1 + C T SKCM 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTCCTTTAACCCCCTGACTTTCCTGCTGCAG < 41bp 1 0.203291299222465 1 0.036710262298584 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273342 nonsynonymous SNV 0.990 0 31 hm5C_associated_SNPs_35950 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42273318-42273368
64251 chr19 49377544 49377544 1 + G A SKCM 49377526 + 49377506 49377546 41 TGAAGGCCTGGGTGTATTGGCCAGGAGAGGACACAGAGGAA TGAAGGCCTGGGTGTATTGGCCAGGAGAGGACACAGAGAAA < 41bp 1 0.488122116996749 1 0.796219110488892 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377526 chr19:49377544 nonsynonymous SNV 0.992 2 39 hm5C_associated_SNPs_35955 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 17322819 17322819 1 + C T SKCM 17322803 + 17322783 17322823 41 AAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGACCCCCC AAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGACTCCCC < 41bp 1 0.164180284305232 1 0.225761920213699 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322803 chr19:17322819 synonymous SNV . 0 37 hm5C_associated_SNPs_35956 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:17322816-17322839
64251 chr15 40509708 40509708 1 + C T SKCM 40509700 + 40509680 40509720 41 CTTAAATCTGGGCTCAGAATCCACGATCCCTATGATTGTAA CTTAAATCTGGGCTCAGAATCCACGATCTCTATGATTGTAA < 41bp 1 0.148896452037039 1 0.388729512691498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40509700 chr15:40509708 nonsynonymous SNV 0.980 0 29 hm5C_associated_SNPs_35957 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:40509687-40509752
64251 chr6 7572181 7572181 1 + G A SKCM 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATA < 41bp 1 0.494418294105363 1 0.804047822952271 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572181 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_35960 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:7572162-7572188
64251 chr6 7572181 7572181 1 + G A SKCM 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACAAGCAAGAAACATGGATGCTGATAGAGCTGCAGAAGATT < 41bp 1 0.150480985058449 1 0.0892315804958344 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572181 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_35961 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:7572162-7572188
64251 chr2 132257781 132257781 1 + T G SKCM 132257787 + 132257767 132257807 41 ATTGTTTCAGGAGCTGCACACCATCTTCCCATGGCTGGTAG ATTGTTTCAGGAGCGGCACACCATCTTCCCATGGCTGGTAG < 41bp 1 0.0591063780322176 1 0.259169697761536 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LOC150776 ENSG00000152117 ncRNA_exonic Human transcribed_processed_pseudogene chr2:132257787 chr2:132257781 . . 0 15 hm5C_associated_SNPs_35962 0 0 1 XRCC6 POSTAR2 ENCODE chr2:132257776-132257820
64251 chr1 86048110 86048110 1 + G A SKCM 86048095 + 86048075 86048115 41 GTCTTCCCTCTTATATGTCTCTAGTTTTTGGAATGGAGCCT GTCTTCCCTCTTATATGTCTCTAGTTTTTGGAATGAAGCCT < 41bp 1 0.234431970609686 1 0.322045922279358 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048095 chr1:86048110 nonsynonymous SNV 0.976 2 36 hm5C_associated_SNPs_35963 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048100-86048180
64251 chr19 17450299 17450299 1 + G A SKCM 17450306 + 17450286 17450326 41 CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC CCGTGACGTGCTGAAGACCCCAGTCGACCTGGCCGGATTTC < 41bp 1 0.27254026861995 1 0.848119378089905 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450306 chr19:17450299 nonsynonymous SNV 0.998 4 14 hm5C_associated_SNPs_35964 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:17450272-17450308
64251 chr7 150773192 150773192 1 + C T SKCM 150773187 + 150773167 150773207 41 TCATGTCCACAGCTGCCTCCCTGGCCTTCCCCTTCATCCTC TCATGTCCACAGCTGCCTCCCTGGCTTTCCCCTTCATCCTC < 41bp 1 0.666963673459539 1 0.167963474988937 experiment 0.666072653080922 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773187 chr7:150773192 synonymous SNV . 0 26 hm5C_associated_SNPs_35965 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150773168-150773199
64251 chr7 150773192 150773192 1 + C T SKCM 150773195 + 150773175 150773215 41 ACAGCTGCCTCCCTGGCCTTCCCCTTCATCCTCATCCTCAC ACAGCTGCCTCCCTGGCTTTCCCCTTCATCCTCATCCTCAC < 41bp 1 0.255413661333458 1 0.0438805818557739 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773195 chr7:150773192 synonymous SNV . 0 18 hm5C_associated_SNPs_35966 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150773168-150773199
64251 chr10 5963508 5963508 1 + C T SKCM 5963513 + 5963493 5963533 41 GACGGAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG GACGGAAGGGGAATTTCCTTCAAGGATACATTTGATTGGGG < 41bp 1 0.681983663733223 1 0.750527739524841 experiment 0.636032672533554 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963513 chr10:5963508 synonymous SNV . 0 16 hm5C_associated_SNPs_35968 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:5963477-5963518
64251 chr10 17278314 17278314 1 + C T SKCM 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCCTTCTGGTTGATACCCACTCAAAA < 41bp 1 0.282141963747637 1 0.558608770370483 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278314 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_35970 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17278300-17278320
64251 chr15 22993143 22993143 1 + C T SKCM 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATTGA < 41bp 1 0.227067932771166 1 0.0582908093929291 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993143 synonymous SNV . 0 39 hm5C_associated_SNPs_35971 0 0 2 FXR2 POSTAR2 ENCODE chr15:22993066-22993149
64251 chr15 22993143 22993143 1 + C T SKCM 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATTGAG < 41bp 1 0.377426171781657 1 0.20545494556427 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993143 synonymous SNV . 0 38 hm5C_associated_SNPs_35972 0 0 2 FXR2 POSTAR2 ENCODE chr15:22993066-22993149
64251 chr17 28772953 28772953 1 + C T SKCM 28772959 + 28772939 28772979 41 ATCTGGCTCTGGCTCTTTATCGATACCATTCCTACAAAGAC ATCTGGCTCTGGCTTTTTATCGATACCATTCCTACAAAGAC < 41bp 1 0.54778061550871 1 0.829916834831238 experiment 0.904438768982579 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPD ENSG00000108582 CDS Human protein_coding chr17:28772959 chr17:28772953 nonsynonymous SNV 0.999 1 15 hm5C_associated_SNPs_35973 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28772922-28772958
64251 chr5 149925012 149925012 1 + C A SKCM 149925006 + 149924986 149925026 41 CCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGA CCCAAAGCCAAGGTCCTGACCATCCTAATCAACCCCGCGGA < 41bp 1 0.167010576265542 1 0.0285009741783142 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDST1 ENSG00000070614 CDS Human protein_coding chr5:149925006 chr5:149925012 synonymous SNV . 0 27 hm5C_associated_SNPs_35975 0 0 2 PCBP2 POSTAR2 ENCODE chr5:149924971-149925046
64251 chr11 67075683 67075683 1 + C T SKCM 67075677 + 67075657 67075697 41 CTGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGA CTGGAGCTGCGCCTGGGGCTCCCCCTTCAGCAGTACCGTGA < 41bp 1 0.234127988834647 1 0.0591522753238678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075677 chr11:67075683 synonymous SNV . 0 27 hm5C_associated_SNPs_35976 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67075651-67075708
64251 chr17 65909118 65909118 1 + A G SKCM 65909116 + 65909096 65909136 41 CTCGTTCAGGTACAGCTCTGCCATCCTATAGAAAATTTGTT CTCGTTCAGGTACAGCTCTGCCGTCCTATAGAAAATTTGTT < 41bp 1 0.00817831184844361 1 0.0822014510631561 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65909116 chr17:65909118 synonymous SNV . 0 23 hm5C_associated_SNPs_35978 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65909012-65909119
64251 chr12 122213562 122213562 1 + C T SKCM 122213570 + 122213550 122213590 41 CCTCGGCAACTTCCTGACCACGCTCAAAGTCGTGCATGCCA CCTCGGCAACTTTCTGACCACGCTCAAAGTCGTGCATGCCA < 41bp 1 0.10027162016434 1 0.0802081227302551 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM120B ENSG00000188735 CDS Human protein_coding chr12:122213570 chr12:122213562 nonsynonymous SNV 0.902 0 13 hm5C_associated_SNPs_35980 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:122213544-122213575
64251 chr10 72324250 72324250 1 + G A SKCM 72324236 + 72324216 72324256 41 TACCTCCACCTGGAGAAGGCCGACTCCTGGCAGAGGCCCTT TACCTCCACCTGGAGAAGGCCGACTCCTGGCAGAAGCCCTT < 41bp 1 0.159129769508906 1 0.350291639566422 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control PALD1 ENSG00000107719 CDS Human protein_coding chr10:72324236 chr10:72324250 nonsynonymous SNV 0.992 1 35 hm5C_associated_SNPs_35981 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:72324237-72324264
64251 chr8 38899577 38899577 1 + C T SKCM 38899581 + 38899561 38899601 41 TGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGG TGAAGCCTATAGTGCTTCCTCCTGTGGTAATAAGTTGGTGG < 41bp 1 0.215399995881178 1 0.458009839057922 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38899581 chr8:38899577 nonsynonymous SNV 0.997 4 17 hm5C_associated_SNPs_35982 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr8:38899562-38899584
64251 chr14 105936405 105936405 1 + G A SKCM 105936408 + 105936388 105936428 41 ACCTCTGCCCACAGGAAGATCCGCAAGCTGCTCTCATCCTC ACCTCTGCCCACAGGAAAATCCGCAAGCTGCTCTCATCCTC < 41bp 1 0.749828064915529 1 0.322767615318298 experiment 0.500343870168942 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936408 chr14:105936405 synonymous SNV . 0 18 hm5C_associated_SNPs_35985 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105936399-105936435
64251 chr19 49993751 49993751 1 + C T SKCM 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGGCTTTCCTTCGCAAGCGGATGAACACC < 41bp 1 0.544224542190639 1 0.0765743255615234 experiment 0.911550915618722 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993751 synonymous SNV . 0 23 hm5C_associated_SNPs_35986 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr19 49993752 49993752 1 + C T SKCM 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGGCTTTCCTCTGCAAGCGGATGAACACC < 41bp 1 0.609981887079809 1 0.167014867067337 experiment 0.780036225840381 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993752 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_35987 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr5 172386889 172386889 1 + C T SKCM 172386906 + 172386886 172386926 41 AATCCCTTCGTTACCTCGGACCGCAGTAAAAACCGCAAACG AATTCCTTCGTTACCTCGGACCGCAGTAAAAACCGCAAACG < 41bp 1 0.658571553413818 1 0.222514867782593 experiment 0.682856893172364 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172386906 chr5:172386889 nonsynonymous SNV 0.956 0 4 hm5C_associated_SNPs_35988 0 0 2 DDX3X POSTAR2 ENCODE chr5:172386865-172386889
64251 chr19 11105632 11105632 1 + G A SKCM 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACGGAGCGGGAGCAGAAAAAAGAGAACGAGCGG < 41bp 1 0.589175336620489 1 0.618752896785736 experiment 0.821649326759021 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105632 synonymous SNV . 0 26 hm5C_associated_SNPs_35989 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:11105600-11105640
64251 chr1 235577778 235577778 1 + G A SKCM 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCCGACAGGAGGATCCTTTATTCGTCCAAACAAGG < 41bp 1 0.011604665527564 1 0.058920830488205 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577778 synonymous SNV . 0 34 hm5C_associated_SNPs_35990 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:235577754-235577779
64251 chr3 186338685 186338685 1 + C T SKCM 186338682 + 186338662 186338702 41 TGCTGCTGGGCCAGTGGTTCCTCCATGTCCGGGGAGGATCA TGCTGCTGGGCCAGTGGTTCCTCTATGTCCGGGGAGGATCA < 41bp 1 0.738348073222383 1 0.933550775051117 experiment 0.523303853555233 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control AHSG ENSG00000145192 CDS Human protein_coding chr3:186338682 chr3:186338685 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_35991 0 0 8 LARP4 POSTAR2 ENCODE chr3:186338673-186338699
64251 chr16 28950019 28950019 1 + G A SKCM 28950000 + 28949980 28950020 41 ATCCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATGA ATCCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATAA < 41bp 1 0.096420925418294 1 0.0995245575904846 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CD19 ENSG00000177455 CDS Human protein_coding chr16:28950000 chr16:28950019 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_35992 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:28950009-28950035
64251 chr16 28950019 28950019 1 + G A SKCM 28950001 + 28949981 28950021 41 TCCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATGAG TCCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATAAG < 41bp 1 0.0399710218033112 1 0.0513867735862732 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CD19 ENSG00000177455 CDS Human protein_coding chr16:28950001 chr16:28950019 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_35993 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:28950009-28950035
64251 chr16 28950019 28950019 1 + G A SKCM 28950002 + 28949982 28950022 41 CCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATGAGA CCCCCGCCCAAGCAGGGTCCCAGTCCTATGAGGATATAAGA < 41bp 1 0.0749282633687388 1 0.145787209272385 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CD19 ENSG00000177455 CDS Human protein_coding chr16:28950002 chr16:28950019 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_35994 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:28950009-28950035
64251 chr1 24996657 24996657 1 + C A SKCM 24996652 + 24996632 24996672 41 GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGT GTCTGTAAGAAGGGTCTCATCCTCCAGATCTGTCTCCGGGT < 41bp 1 0.21164508877743 1 0.103985458612442 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996652 chr1:24996657 synonymous SNV . 0 26 hm5C_associated_SNPs_35995 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996657 24996657 1 + C A SKCM 24996673 + 24996653 24996693 41 CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA CTCCAGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA < 41bp 1 0.594042757874552 1 0.0278659164905548 experiment 0.811914484250896 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996673 chr1:24996657 synonymous SNV . 0 5 hm5C_associated_SNPs_35996 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996657 24996657 1 + C A SKCM 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CAGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC < 41bp 1 0.584981988573968 1 0.391006827354431 experiment 0.830036022852064 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996657 synonymous SNV . 0 2 hm5C_associated_SNPs_35997 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr9 4697137 4697137 1 + G C SKCM 4697148 + 4697128 4697168 41 TTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGC TTTTTGTCTCACCATCCATACCTTGTATGTGAAGAAACTGC < 41bp 1 0.0458768972427765 1 0.0483539700508118 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4697148 chr9:4697137 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_35998 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:4697126-4697152
64251 chr9 134382804 134382804 1 + C T SKCM 134382812 + 134382792 134382832 41 GCTGCCAGCACTCGCGGGGGCCTTGTCGGTCCCCATGGCCT GCTGCCAGCACTTGCGGGGGCCTTGTCGGTCCCCATGGCCT < 41bp 1 0.0563571326008691 1 0.0561303794384003 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POMT1 ENSG00000130714 CDS Human protein_coding chr9:134382812 chr9:134382804 synonymous SNV . 0 13 hm5C_associated_SNPs_36000 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:134382795-134382822
64251 chrX 152037407 152037407 1 + C T SKCM 152037426 + 152037406 152037446 41 GCCCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT GTCCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT < 41bp 1 0.52631310446461 1 0.0267917811870575 experiment 0.94737379107078 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037426 chrX:152037407 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_36001 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152037392-152037414
64251 chrX 152037408 152037408 1 + C T SKCM 152037426 + 152037406 152037446 41 GCCCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT GCTCCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCT < 41bp 1 0.588146580570876 1 0.0311009287834167 experiment 0.823706838858248 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037426 chrX:152037408 synonymous SNV . 0 3 hm5C_associated_SNPs_36002 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152037392-152037414
64251 chrX 153608125 153608125 1 + C T SKCM 153608138 + 153608118 153608158 41 CCCAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA CCCAGCTTGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGA < 41bp 1 0.44197570031401 1 0.154167145490646 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608138 chrX:153608125 nonsynonymous SNV 0.079 3 8 hm5C_associated_SNPs_36003 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chrX 153608125 153608125 1 + C T SKCM 153608140 + 153608120 153608160 41 CAGCTCGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA CAGCTTGTCCGCCGCCTCCTCTTATAGCTTCTCTGGTGAGA < 41bp 1 0.244472854517618 1 0.153422713279724 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EMD ENSG00000102119 CDS Human protein_coding chrX:153608140 chrX:153608125 nonsynonymous SNV 0.079 3 6 hm5C_associated_SNPs_36004 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr8 41355112 41355112 1 + C T SKCM 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGGCCAGTCATATTTCGAAGGTTGT < 41bp 1 0.111840628155382 1 0.198799312114716 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355112 nonsynonymous SNV 0.786 1 30 hm5C_associated_SNPs_36005 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:41355093-41355115
64251 chr16 30096328 30096328 1 + C T SKCM 30096347 + 30096327 30096367 41 CCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC CTCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC < 41bp 1 0.311943630987438 1 0.110338866710663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096347 chr16:30096328 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_36006 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30096210-30096333
64251 chr2 11905806 11905806 1 + C T SKCM 11905811 + 11905791 11905831 41 AACCTCCAATGCTCCCCTTTCCACGTCCGCTTTGGGAAGAT AACCTCCAATGCTCCTCTTTCCACGTCCGCTTTGGGAAGAT < 41bp 1 0.344984681172678 1 0.735475838184357 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LPIN1 ENSG00000134324 CDS Human protein_coding chr2:11905811 chr2:11905806 nonsynonymous SNV 0.977 3 16 hm5C_associated_SNPs_36008 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:11905805-11905806
64251 chr19 42373237 42373237 1 + C T SKCM 42373228 + 42373208 42373248 41 CGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT CGAGGCTCCAAGAGTGTGGCCCGCCGGGTTCTCCAAGCCCT < 41bp 1 0.233837575827331 1 0.0750759840011597 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373228 chr19:42373237 synonymous SNV . 0 30 hm5C_associated_SNPs_36010 0 0 45 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373237 42373237 1 + C T SKCM 42373231 + 42373211 42373251 41 GGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGA GGCTCCAAGAGTGTGGCCCGCCGGGTTCTCCAAGCCCTGGA < 41bp 1 0.697623756302245 1 0.452813267707825 experiment 0.604752487395509 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373231 chr19:42373237 synonymous SNV . 0 27 hm5C_associated_SNPs_36011 0 0 45 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr7 100200132 100200132 1 + C T SKCM 100200134 + 100200114 100200154 41 CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGCCCAGGGC CCCTCCTCACTGCCTGCGTCCTGCTGCCTTTTGCCCAGGGC < 41bp 1 0.280459501271405 1 0.383491396903992 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100200134 chr7:100200132 nonsynonymous SNV 0.992 1 19 hm5C_associated_SNPs_36012 0 0 2 NOL12 POSTAR2 ENCODE chr7:100200074-100200139
64251 chr11 67258443 67258443 1 + C T SKCM 67258452 + 67258432 67258472 41 AAAGCCCGGTTCCGGGGGATCTTCTCCCATTGACAGGAGCA AAAGCCCGGTTTCGGGGGATCTTCTCCCATTGACAGGAGCA < 41bp 1 0.131647159558404 1 0.0820195376873016 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AIP ENSG00000110711 CDS Human protein_coding chr11:67258452 chr11:67258443 synonymous SNV . 0 12 hm5C_associated_SNPs_36014 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67258440-67258463
64251 chr5 14280524 14280524 1 + C T SKCM 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGGAGACTCATTTTCTATCTAGCCTGT < 41bp 1 0.264119716653161 1 0.0876598060131073 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280524 nonsynonymous SNV 0.997 2 28 hm5C_associated_SNPs_36015 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr1 154306661 154306661 1 + C T SKCM 154306671 + 154306651 154306691 41 AATAAGTTCCCTCTGAGCAACCAGAACATGCTGCTGCGGGG AATAAGTTCCTTCTGAGCAACCAGAACATGCTGCTGCGGGG < 41bp 1 0.380436281547166 1 0.439347594976425 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154306671 chr1:154306661 nonsynonymous SNV 0.995 1 11 hm5C_associated_SNPs_36016 0 0 3 DDX24 POSTAR2 ENCODE chr1:154306649-154306742
64251 chr1 233514953 233514953 1 + C T SKCM 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTGGCATCGGTGGTTCTGGGACTGG < 41bp 1 0.250215780074915 1 0.0548083484172821 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514953 nonsynonymous SNV 0.144 3 30 hm5C_associated_SNPs_36019 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chrX 73046475 73046475 1 - G A SKCM 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCTTAAAC < 41bp 1 0.538741025057723 1 0.599575042724609 experiment 0.922517949884553 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046475 . . 0 36 hm5C_associated_SNPs_36020 0 0 92 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr5 176524640 176524640 1 + C T SKCM 176524624 + 176524604 176524644 41 ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGC ATTCTGTCTTCAGCCACGACCCCCTGCCATTGGGATTCAGC < 41bp 1 0.118840041288268 1 0.0506351292133331 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524624 chr5:176524640 nonsynonymous SNV 0.080 2 37 hm5C_associated_SNPs_36021 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chr5 176524640 176524640 1 + C T SKCM 176524627 + 176524607 176524647 41 CTGTCTTCAGCCACGACCCCCTGCCATTGGGATCCAGCTCC CTGTCTTCAGCCACGACCCCCTGCCATTGGGATTCAGCTCC < 41bp 1 0.298354722505465 1 0.0423549115657806 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176524627 chr5:176524640 nonsynonymous SNV 0.080 2 34 hm5C_associated_SNPs_36022 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176524624-176524671
64251 chrX 131202542 131202542 1 + G A SKCM 131202534 + 131202514 131202554 41 ACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG ACACAGATTAAAAGAAATACCTTTGTGGAAACTCCATTTTG < 41bp 1 0.378970709231537 1 0.0231605768203735 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK26 ENSG00000134602 CDS Human protein_coding chrX:131202534 chrX:131202542 nonsynonymous SNV 0.995 4 29 hm5C_associated_SNPs_36024 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:131202519-131202555
64251 chr1 28861653 28861653 1 + C T SKCM 28861637 + 28861617 28861657 41 TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCA TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGTCTCA < 41bp 1 0.238395635765394 1 0.258401334285736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861637 chr1:28861653 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_36025 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:28861631-28861658
64251 chr20 42341730 42341730 1 + C T SKCM 42341738 + 42341718 42341758 41 TGTCCACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTG TGTCCACACTGCTCAAGTCTCTATCCTTGGTAAGGCTTCTG < 41bp 1 0.0851824109103412 1 0.125099390745163 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341738 chr20:42341730 nonsynonymous SNV 0.666 3 13 hm5C_associated_SNPs_36026 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:42341657-42341738
64251 chr20 42341730 42341730 1 + C T SKCM 42341742 + 42341722 42341762 41 CACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTGCTCC CACACTGCTCAAGTCTCTATCCTTGGTAAGGCTTCTGCTCC < 41bp 1 0.0777911590043202 1 0.0597805678844452 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341742 chr20:42341730 nonsynonymous SNV 0.666 3 9 hm5C_associated_SNPs_36027 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:42341657-42341738
64251 chr3 184039162 184039162 1 + C T SKCM 184039163 + 184039143 184039183 41 CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCAG CCAGCCTTCGTCGCCTTCTTCGACCCCATCACCATCCCCAG < 41bp 1 0.467158629049713 1 0.926319241523743 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039163 chr3:184039162 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_36029 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr7 6641744 6641744 1 + C T SKCM 6641737 + 6641717 6641757 41 TCTCCTTAATTGCAGATGACCTGAGAACCTTGTGCTCCAGG TCTCCTTAATTGCAGATGACCTGAGAATCTTGTGCTCCAGG < 41bp 1 0.29137341695646 1 0.204672515392303 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6641737 chr7:6641744 nonsynonymous SNV 0.996 2 28 hm5C_associated_SNPs_36033 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:6641743-6641772
64251 chrX 73043525 73043525 1 - C T SKCM 73043508 - 73043488 73043528 41 GAGGAGATGGAAAATTTTTGCAAAAAACAAGGTGTTGTGGT GAGAAGATGGAAAATTTTTGCAAAAAACAAGGTGTTGTGGT < 41bp 1 0.321739356854113 1 0.603963494300842 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043508 chrX:73043525 . . 0 4 hm5C_associated_SNPs_36035 0 0 64 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043525 73043525 1 - C T SKCM 73043534 - 73043514 73043554 41 GAAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAAT GAAGATACATGCTTCCTGGCCTGATTGAGAAGATGGAAAAT < 41bp 1 0.102031945179315 1 0.17523866891861 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043534 chrX:73043525 . . 0 30 hm5C_associated_SNPs_36036 0 0 64 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr12 53663157 53663157 1 + C T SKCM 53663151 + 53663131 53663171 41 TGCTCCCCAGGACTATGAGGCCGTGGCTCGGGGCAGCTTTT TGCTCCCCAGGACTATGAGGCCGTGGTTCGGGGCAGCTTTT < 41bp 1 0.20060317583148 1 0.408236563205719 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663151 chr12:53663157 nonsynonymous SNV 0.476 0 27 hm5C_associated_SNPs_36037 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:53663140-53663160
64251 chr12 6635479 6635479 1 + C T SKCM 6635482 + 6635462 6635502 41 GGCAAACGTCACCCCCCCTTCCGGCTGCCTCAGGAACACAG GGCAAACGTCACCCCCCTTTCCGGCTGCCTCAGGAACACAG < 41bp 1 0.41442143484074 1 0.647736430168152 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6635482 chr12:6635479 synonymous SNV . 0 18 hm5C_associated_SNPs_36038 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:6635466-6635495
64251 chr11 61106811 61106811 1 + C T SKCM 61106796 + 61106776 61106816 41 GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATTCCGGT < 41bp 1 0.608778772412926 1 0.383724093437195 experiment 0.782442455174149 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106796 chr11:61106811 synonymous SNV . 0 36 hm5C_associated_SNPs_36039 0 0 4 DDX24 POSTAR2 ENCODE chr11:61106805-61106873
64251 chr11 61106811 61106811 1 + C T SKCM 61106797 + 61106777 61106817 41 GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGTG GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATTCCGGTG < 41bp 1 0.783687865103129 1 0.680120289325714 experiment 0.432624269793741 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106797 chr11:61106811 synonymous SNV . 0 35 hm5C_associated_SNPs_36040 0 0 4 DDX24 POSTAR2 ENCODE chr11:61106805-61106873
64251 chr19 42880627 42880627 1 + C T SKCM 42880609 + 42880589 42880629 41 CCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACCCAT CCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACCTAT < 41bp 1 0.232566115347251 1 0.735053777694702 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42880609 chr19:42880627 synonymous SNV . 0 39 hm5C_associated_SNPs_36041 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:42880614-42880639
64251 chr19 10893725 10893725 1 + C T SKCM 10893721 + 10893701 10893741 41 CTGGCAGCTGAGAGGAAGTTCTTCCTCTCCCACCCGGCCTA CTGGCAGCTGAGAGGAAGTTCTTCTTCTCCCACCCGGCCTA < 41bp 1 0.250112220189328 1 0.0824697911739349 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893721 chr19:10893725 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_36042 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr8 124219654 124219654 1 + C T SKCM 124219661 + 124219641 124219681 41 GCAGGCAGCCACCCCGGTACCCGAAGTGTGTCCGCGTCTTC GCAGGCAGCCACCTCGGTACCCGAAGTGTGTCCGCGTCTTC < 41bp 1 0.788169499173729 1 0.336025297641754 experiment 0.423661001652541 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM83A ENSG00000147689 CDS Human protein_coding chr8:124219661 chr8:124219654 nonsynonymous SNV 0.009 1 14 hm5C_associated_SNPs_36043 0 0 6 GEMIN5 POSTAR2 ENCODE chr8:124219590-124219657
64251 chr18 77457903 77457903 1 + G A SKCM 77457896 + 77457876 77457916 41 GAAGAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTG GAAGAGAAGACCAGCAGCGACTGCACCAAAACCGGAAGCTG < 41bp 1 0.595638443669524 1 0.484692305326462 experiment 0.808723112660953 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77457896 chr18:77457903 nonsynonymous SNV 0.143 4 28 hm5C_associated_SNPs_36044 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:77457894-77457919
64251 chr12 49724711 49724711 1 + C T SKCM 49724720 + 49724700 49724740 41 CTTTGAGACCCCCAGCAGGCCAGGCAGGTAAGGAGTTGGCT CTTTGAGACCCTCAGCAGGCCAGGCAGGTAAGGAGTTGGCT < 41bp 1 0.301346653098768 1 0.147789061069489 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TROAP ENSG00000135451 CDS Human protein_coding chr12:49724720 chr12:49724711 nonsynonymous SNV 0.005 0 12 hm5C_associated_SNPs_36045 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:49724711-49724712
64251 chr9 131559401 131559401 1 + C T SKCM 131559385 + 131559365 131559405 41 AGGGCCACTGACTACCCTTGCCTCCTCATCCTGGACCCCCA AGGGCCACTGACTACCCTTGCCTCCTCATCCTGGACTCCCA < 41bp 1 0.0446653059265169 1 0.0512673556804657 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D13 ENSG00000107021 CDS Human protein_coding chr9:131559385 chr9:131559401 nonsynonymous SNV 0.984 1 37 hm5C_associated_SNPs_36048 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131559372-131559410
64251 chr19 35773543 35773543 1 + G A SKCM 35773554 + 35773534 35773574 41 CGCCAGCCTGACCAGTGGCTCTGTTTTCCCACAACAGGTGA CGCCAGCCTAACCAGTGGCTCTGTTTTCCCACAACAGGTGA < 41bp 1 0.32305050638708 1 0.0911121964454651 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HAMP ENSG00000105697 CDS Human protein_coding chr19:35773554 chr19:35773543 synonymous SNV . 0 10 hm5C_associated_SNPs_36051 0 0 3 LARP4 POSTAR2 ENCODE chr19:35773436-35773579
64251 chr3 142840921 142840921 1 + G A SKCM 142840907 + 142840887 142840927 41 TGCAGCCCCCTGACTGGCTGCAGGGCCACTACCTGGTGGTG TGCAGCCCCCTGACTGGCTGCAGGGCCACTACCTAGTGGTG < 41bp 1 0.508812307300073 1 0.724011898040771 experiment 0.982375385399854 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840907 chr3:142840921 synonymous SNV . 0 35 hm5C_associated_SNPs_36052 0 0 4 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr22 41735888 41735888 1 + C T SKCM 41735900 + 41735880 41735920 41 CCCGTGTTCCCCGGCGGGACCCCACTGCTACCACCTGTGGT CCCGTGTTTCCCGGCGGGACCCCACTGCTACCACCTGTGGT < 41bp 1 0.0764734686513668 1 0.0619634985923767 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735900 chr22:41735888 synonymous SNV . 0 9 hm5C_associated_SNPs_36054 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41735876-41735897
64251 chr7 90355918 90355918 1 + G A SKCM 90355900 + 90355880 90355920 41 GATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAA GATATGTGTCACAAAGATGTCTACACGGAACTGCCAGGAAA < 41bp 1 0.544891652687683 1 0.0789504945278168 experiment 0.910216694624634 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355900 chr7:90355918 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_36055 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355918 90355918 1 + G A SKCM 90355903 + 90355883 90355923 41 ATGTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGG ATGTGTCACAAAGATGTCTACACGGAACTGCCAGGAAATGG < 41bp 1 0.36868302943955 1 0.0779419243335724 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355903 chr7:90355918 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_36056 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr7 90355918 90355918 1 + G A SKCM 90355905 + 90355885 90355925 41 GTGTCACAAAGATGTCTACACGGAACTGCCAGGGAATGGAC GTGTCACAAAGATGTCTACACGGAACTGCCAGGAAATGGAC < 41bp 1 0.471947627027395 1 0.170041084289551 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK14 ENSG00000058091 CDS Human protein_coding chr7:90355905 chr7:90355918 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_36057 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:90355892-90355922
64251 chr13 76395507 76395507 1 + G A SKCM 76395515 + 76395495 76395535 41 CTTTTGCAAAAAGAGAGGACCGTGTAACAACTGAAATTCAG CTTTTGCAAAAAAAGAGGACCGTGTAACAACTGAAATTCAG < 41bp 1 0.105994373650503 1 0.159868717193604 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76395515 chr13:76395507 nonsynonymous SNV 0.592 0 13 hm5C_associated_SNPs_36058 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:76395500-76395520
64251 chr11 126143269 126143269 1 + C T SKCM 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTTCGGTTCA < 41bp 1 0.507234930478368 1 0.0860559642314911 experiment 0.985530139043264 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143269 synonymous SNV . 0 34 hm5C_associated_SNPs_36060 0 0 2 SF3B4 POSTAR2 ENCODE chr11:126143181-126143274
64251 chr12 56504387 56504387 1 + C T SKCM 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGAGAACCACTATTTACAAACGAGACCCTTCTAAACA < 41bp 1 0.32063902479897 1 0.158086866140366 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504387 synonymous SNV . 0 33 hm5C_associated_SNPs_36061 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr7 128478853 128478853 1 + G A SKCM 128478838 + 128478818 128478858 41 CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCAGAAGG < 41bp 1 0.0596246840750621 1 0.0370257198810577 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128478838 chr7:128478853 synonymous SNV . 0 36 hm5C_associated_SNPs_36062 0 0 1 SF3B4 POSTAR2 ENCODE chr7:128478850-128478893
64251 chr19 58906062 58906062 1 + C T SKCM 58906069 + 58906049 58906089 41 GGCTCCTCGAACTCCTATGCCATTAAGAAGAAGGACGAGCT GGCTCCTCGAACTTCTATGCCATTAAGAAGAAGGACGAGCT < 41bp 1 0.217948717312637 1 0.0539397895336151 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906069 chr19:58906062 nonsynonymous SNV 0.998 3 14 hm5C_associated_SNPs_36064 0 0 40 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr20 57478841 57478841 1 + C T SKCM 57478822 + 57478802 57478842 41 TACATCCTGAGTGTGATGAACGTGCCTGACTTTGACTTCCC TACATCCTGAGTGTGATGAACGTGCCTGACTTTGACTTCTC < 41bp 1 0.254032385180383 1 0.0473552346229553 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57478822 chr20:57478841 nonsynonymous SNV 0.998 2 40 hm5C_associated_SNPs_36067 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57478762-57478845
64251 chr20 57478841 57478841 1 + C T SKCM 57478840 + 57478820 57478860 41 AACGTGCCTGACTTTGACTTCCCTCCCGTAAGCTACACCCC AACGTGCCTGACTTTGACTTCTCTCCCGTAAGCTACACCCC < 41bp 1 0.141968773471262 1 0.116267085075378 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57478840 chr20:57478841 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_36068 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57478762-57478845
64251 chr14 20943236 20943236 1 + C T SKCM 20943217 + 20943197 20943237 41 GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCC GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTTC < 41bp 1 0.502913606404595 1 0.217008173465729 experiment 0.994172787190809 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 CDS Human protein_coding chr14:20943217 chr14:20943236 synonymous SNV . 0 40 hm5C_associated_SNPs_36069 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20943220-20943260
64251 chr3 130712923 130712923 1 + G A SKCM 130712932 + 130712912 130712952 41 TCCTAGTGGATGATGATTTTCAAACCATAATGTAAGCTTTG TCCTAGTGGATAATGATTTTCAAACCATAATGTAAGCTTTG < 41bp 1 0.246946610446781 1 0.285438567399979 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130712932 chr3:130712923 nonsynonymous SNV 0.993 5 12 hm5C_associated_SNPs_36070 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:130712896-130712932
64251 chr20 43052675 43052675 1 + G A SKCM 43052674 + 43052654 43052694 41 GTAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCG GTAGATGCCAAGGGGCTGAGCAATCCAGGGAAGATCAAGCG < 41bp 1 0.12363759056106 1 0.286897897720337 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052674 chr20:43052675 nonsynonymous SNV 0.925 2 22 hm5C_associated_SNPs_36072 1 0 1 U2AF2 POSTAR2 ENCODE chr20:43052596-43052715
64251 chr13 93879776 93879776 1 + G A SKCM 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCTCCCCGCCGGGACGGATGTGAAGGCTC < 41bp 1 0.534685901414008 1 0.861261188983917 experiment 0.930628197171985 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879776 nonsynonymous SNV 0.997 0 26 hm5C_associated_SNPs_36073 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr16 28843514 28843514 1 + C T SKCM 28843531 + 28843511 28843551 41 CCCCTTTTCTTCCAGTGGGCCGGATGTATCCCCCGCGTTCT CCCTTTTTCTTCCAGTGGGCCGGATGTATCCCCCGCGTTCT < 41bp 1 0.361200767058033 1 0.362997561693192 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28843531 chr16:28843514 nonsynonymous SNV 0.961 1 4 hm5C_associated_SNPs_36078 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:28843507-28843536
64251 chr8 98837319 98837319 1 + C T SKCM 98837312 + 98837292 98837332 41 TTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAATGG TTGATTAGCTGTGTTTGGAACTGCTACTGATACATCAATGG < 41bp 1 0.224674186508912 1 0.112635493278503 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAPTM4B ENSG00000104341 CDS Human protein_coding chr8:98837312 chr8:98837319 stopgain 0.983 1 28 hm5C_associated_SNPs_36080 0 0 21 LIN28A POSTAR2 GSE39873,GSM980593 chr8:98837280-98837340
64251 chr9 21859391 21859391 1 + C T SKCM 21859402 + 21859382 21859422 41 GATAGGGTCCACAGAATGGTCAGAAACCCTCCATAACCTGA GATAGGGTCTACAGAATGGTCAGAAACCCTCCATAACCTGA < 41bp 1 0.669768469653769 1 0.473857343196869 experiment 0.660463060692463 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859402 chr9:21859391 synonymous SNV . 0 10 hm5C_associated_SNPs_36085 0 0 4 HNRNPU POSTAR2 GSE34491,GSM850170 chr9:21859380-21859400
64251 chr1 220267642 220267642 1 + C T SKCM 220267629 + 220267609 220267649 41 TGCCCGAAGTTTGTGGGGGACGCCCCGCCTTCCCTGCAGCC TGCCCGAAGTTTGTGGGGGACGCCCCGCCTTCCTTGCAGCC < 41bp 1 0.46049229334895 1 0.264870494604111 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control IARS2 ENSG00000067704 CDS Human protein_coding chr1:220267629 chr1:220267642 synonymous SNV . 0 34 hm5C_associated_SNPs_36086 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220267617-220267742
64251 chr14 20943237 20943237 1 + C T SKCM 20943217 + 20943197 20943237 41 GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCC GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCT < 41bp 1 0.462955915662188 1 0.181975454092026 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 CDS Human protein_coding chr14:20943217 chr14:20943237 nonsynonymous SNV 0.997 5 41 hm5C_associated_SNPs_36087 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20943220-20943260
64251 chr14 21464991 21464991 1 + C T SKCM 21464984 + 21464964 21465004 41 GTGTCAGCTCCTGGGGAGATCTTTTACCTGTGCTTACTCCG GTGTCAGCTCCTGGGGAGATCTTTTACTTGTGCTTACTCCG < 41bp 1 0.148635003665695 1 0.38956406712532 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464984 chr14:21464991 nonsynonymous SNV 0.960 3 28 hm5C_associated_SNPs_36088 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:21464934-21464997
64251 chr9 133507337 133507337 1 + C T SKCM 133507332 + 133507312 133507352 41 CTTTTACCTTTTCCCAGTACCTTTCCTCCAAGGAGCTCCGG CTTTTACCTTTTCCCAGTACCTTTCTTCCAAGGAGCTCCGG < 41bp 1 0.0767891630575099 1 0.0187589228153229 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133507332 chr9:133507337 nonsynonymous SNV 0.599 1 26 hm5C_associated_SNPs_36089 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:133507329-133507371
64251 chr6 138202199 138202199 1 + C T SKCM 138202184 + 138202164 138202204 41 CCACTCAGAGATCGAGCCAGCGCAGAGATGTGCCTCGAACC CCACTCAGAGATCGAGCCAGCGCAGAGATGTGCCTTGAACC < 41bp 1 0.315866489672733 1 0.520382225513458 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138202184 chr6:138202199 stopgain 0.756 0 36 hm5C_associated_SNPs_36090 0 0 2 BUD13 POSTAR2 ENCODE chr6:138202153-138202263
64251 chr1 10231363 10231363 1 + C T SKCM 10231351 + 10231331 10231371 41 GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGC GATATTTACTTACAGCTGGACTGTGCTCGGTTTGCGAAAGC < 41bp 1 0.227088368555235 1 0.105401813983917 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10231351 chr1:10231363 synonymous SNV . 0 33 hm5C_associated_SNPs_36106 0 0 4 FXR2 POSTAR2 ENCODE chr1:10231334-10231386
64251 chr14 105180799 105180799 1 + C T SKCM 105180779 + 105180759 105180799 41 CCACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCC CCACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCT < 41bp 1 0.198542944257431 1 0.326882481575012 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180779 chr14:105180799 synonymous SNV . 0 41 hm5C_associated_SNPs_36109 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr14 105180799 105180799 1 + C T SKCM 105180780 + 105180760 105180800 41 CACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCT CACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCTT < 41bp 1 0.187552161944849 1 0.0781185925006866 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180780 chr14:105180799 synonymous SNV . 0 40 hm5C_associated_SNPs_36110 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr14 105180799 105180799 1 + C T SKCM 105180781 + 105180761 105180801 41 ACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCTG ACTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCTTG < 41bp 1 0.130051052848977 1 0.312680065631866 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180781 chr14:105180799 synonymous SNV . 0 39 hm5C_associated_SNPs_36111 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr14 105180799 105180799 1 + C T SKCM 105180782 + 105180762 105180802 41 CTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCCTGG CTGAGGATCCCCAGTGCCCCCAGCCCTTGGAGGGGGCTTGG < 41bp 1 0.359238675511699 1 0.375870227813721 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180782 chr14:105180799 synonymous SNV . 0 38 hm5C_associated_SNPs_36112 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr14 105180799 105180799 1 + C T SKCM 105180798 + 105180778 105180818 41 CCCCCAGCCCTTGGAGGGGGCCTGGCCGGTGACTCTGGGAG CCCCCAGCCCTTGGAGGGGGCTTGGCCGGTGACTCTGGGAG < 41bp 1 0.22403550849094 1 0.242397427558899 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180798 chr14:105180799 synonymous SNV . 0 22 hm5C_associated_SNPs_36113 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr14 104642755 104642755 1 + C T SKCM 104642772 + 104642752 104642792 41 CCTCCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG CCTTCCCCGGAAACCGAGGACTGCCTCTGCCACCACCCGTG < 41bp 1 0.20504653461151 1 0.0515042543411255 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104642772 chr14:104642755 synonymous SNV . 0 4 hm5C_associated_SNPs_36114 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104642723-104642789
64251 chr1 44019227 44019227 1 + C T SKCM 44019220 + 44019200 44019240 41 TGGGCTGTCAGGAGGGGTAGCCTCCTTCGTGTGCCAAGCTA TGGGCTGTCAGGAGGGGTAGCCTCCTTTGTGTGCCAAGCTA < 41bp 1 0.0319929291089607 1 0.135940104722977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44019220 chr1:44019227 synonymous SNV . 0 28 hm5C_associated_SNPs_36115 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:44019189-44019237
64251 chr1 44087626 44087626 1 + C T SKCM 44087609 + 44087589 44087629 41 GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGCTACCGT GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGCTATCGT < 41bp 1 0.313140152007546 1 0.318939030170441 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44087609 chr1:44087626 synonymous SNV . 0 38 hm5C_associated_SNPs_36116 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:44087620-44087639
64251 chr12 57597283 57597283 1 + G A SKCM 57597276 + 57597256 57597296 41 GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGG GACGCCGACTGCATGGACGGCAGCGACAAGGAGGCCTGCGG < 41bp 1 0.20264922474338 1 0.326977103948593 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57597276 chr12:57597283 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_36118 0 0 2 PPIG POSTAR2 ENCODE chr12:57597201-57597304
64251 chr3 142741799 142741799 1 + C T SKCM 142741800 + 142741780 142741820 41 TATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGC TATGATGGAACATACGCTTTCCCCACCTCCATCCGGACTGC < 41bp 1 0.632422709867851 1 0.0394450128078461 experiment 0.735154580264298 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142741800 chr3:142741799 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_36119 0 0 17 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:142741760-142741800
64251 chr12 124239059 124239059 1 + C T SKCM 124239064 + 124239044 124239084 41 CTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACGCAC CTCCTACCTGAGGCTTTGGGCGCTTAGCCTGGCTCACGCAC < 41bp 1 0.289347452606172 1 0.243267148733139 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239064 chr12:124239059 synonymous SNV . 0 16 hm5C_associated_SNPs_36120 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124239048-124239064
64251 chr22 39125543 39125543 1 + C T SKCM 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTCGACGAAAAAGGGCCTCCTGACGAAACGAGACGA < 41bp 1 0.0155222777855464 1 0.125802218914032 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125543 nonsynonymous SNV 0.658 2 23 hm5C_associated_SNPs_36122 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125543 39125543 1 + C T SKCM 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTCGACGAAAAAGGGCCTCCTGACGAAACGAGACGAG < 41bp 1 0.155851247686304 1 0.454247385263443 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125543 nonsynonymous SNV 0.658 2 22 hm5C_associated_SNPs_36123 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125543 39125543 1 + C T SKCM 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTCGACGAAAAAGGGCCTCCTGACGAAACGAGACGAGGG < 41bp 1 0.113942113505898 1 0.210402250289917 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125543 nonsynonymous SNV 0.658 2 20 hm5C_associated_SNPs_36124 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr22 39125543 39125543 1 + C T SKCM 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTCGACGAAAAAGGGCCTCCTGACGAAACGAGACGAGGGG < 41bp 1 0.155812327186124 1 0.380479633808136 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125543 nonsynonymous SNV 0.658 2 19 hm5C_associated_SNPs_36125 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:39125488-39125549
64251 chr15 67073660 67073660 1 + C T SKCM 67073651 + 67073631 67073671 41 CTGGACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGT CTGGACGCGCCCGGCGGCCGCGCCCTGGTTGTGCGCAAGGT < 41bp 1 0.425212926160014 1 0.419275760650635 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073651 chr15:67073660 synonymous SNV . 0 30 hm5C_associated_SNPs_36126 0 0 2 METAP2 POSTAR2 ENCODE chr15:67073613-67073666
64251 chr2 233704569 233704569 1 + C T SKCM 233704582 + 233704562 233704602 41 CCTTCTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGC CCTTCTTTTTCAACGTGGGGCCAGCAGTCCAATACAACAGC < 41bp 1 0.0624961639178427 1 0.26029908657074 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704582 chr2:233704569 nonsynonymous SNV 0.998 3 8 hm5C_associated_SNPs_36127 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:233704560-233704580
64251 chr2 233704569 233704569 1 + C T SKCM 233704586 + 233704566 233704606 41 CTTCTTCAACGTGGGGCCAGCAGTCCAATACAACAGCATGT CTTTTTCAACGTGGGGCCAGCAGTCCAATACAACAGCATGT < 41bp 1 0.103963295383585 1 0.592305123806 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233704586 chr2:233704569 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_36128 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:233704560-233704580
64251 chr1 228526038 228526038 1 + G A SKCM 228526019 + 228525999 228526039 41 TGAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGG TGAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAAG < 41bp 1 0.064061309337787 1 0.182869106531143 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526019 chr1:228526038 synonymous SNV . 0 40 hm5C_associated_SNPs_36130 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526038 228526038 1 + G A SKCM 228526020 + 228526000 228526040 41 GAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGC GAGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAAGC < 41bp 1 0.0785709404029132 1 0.123235702514648 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526020 chr1:228526038 synonymous SNV . 0 39 hm5C_associated_SNPs_36131 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526038 228526038 1 + G A SKCM 228526021 + 228526001 228526041 41 AGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGCT AGTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAAGCT < 41bp 1 0.102295415727513 1 0.241210162639618 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526021 chr1:228526038 synonymous SNV . 0 38 hm5C_associated_SNPs_36132 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr1 228526038 228526038 1 + G A SKCM 228526022 + 228526002 228526042 41 GTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAGGCTG GTGGGGGGCCGCTGAGGCCCCTGAGTTCCCTGGGGAAGCTG < 41bp 1 0.183197264051767 1 0.294770658016205 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control OBSCN ENSG00000154358 CDS Human protein_coding chr1:228526022 chr1:228526038 synonymous SNV . 0 37 hm5C_associated_SNPs_36133 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr1:228526020-228526040
64251 chr15 22945069 22945069 1 + C T SKCM 22945057 + 22945037 22945077 41 CAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC CAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCTCAGAAGAC < 41bp 1 0.163085043553559 1 0.200193464756012 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22945057 chr15:22945069 synonymous SNV . 0 33 hm5C_associated_SNPs_36134 0 0 4 BUD13 POSTAR2 ENCODE chr15:22944994-22945076
64251 chr4 155486959 155486959 1 + G A SKCM 155486953 + 155486933 155486973 41 ATTATATTTCTGCCTCATTCCTTGTAGGGTTTCTTCAGTGC ATTATATTTCTGCCTCATTCCTTGTAAGGTTTCTTCAGTGC < 41bp 1 0.132454026487853 1 0.346915036439896 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FGB ENSG00000171564 splicing Human protein_coding chr4:155486953 chr4:155486959 . 0.001 0 27 hm5C_associated_SNPs_36137 0 0 1 LIN28B POSTAR2 ENCODE chr4:155486959-155486974
64251 chr9 137593095 137593095 1 + C T SKCM 137593086 + 137593066 137593106 41 CTCGACTGTAAAAAGAAGACCACCAAATTCCTCGACCGCAG CTCGACTGTAAAAAGAAGACCACCAAATTTCTCGACCGCAG < 41bp 1 0.298169037257962 1 0.180352836847305 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137593086 chr9:137593095 synonymous SNV . 0 30 hm5C_associated_SNPs_36139 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:137593073-137593102
64251 chr17 75398191 75398191 1 + C T SKCM 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCTCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC < 41bp 1 0.360974995803957 1 0.217221826314926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398191 nonsynonymous SNV 0.993 0 7 hm5C_associated_SNPs_36140 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:75398170-75398197
64251 chr1 180064816 180064816 1 + G A SKCM 180064828 + 180064808 180064848 41 AAAAATAAGGCAGAAGAAACCATTGTACCTCTAATGGCAGA AAAAATAAAGCAGAAGAAACCATTGTACCTCTAATGGCAGA < 41bp 1 0.0670792058392491 1 0.376574397087097 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180064828 chr1:180064816 synonymous SNV . 0 9 hm5C_associated_SNPs_36141 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:180064801-180064832
64251 chr10 122664263 122664263 1 + C T SKCM 122664258 + 122664238 122664278 41 AGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCA AGTCACTACTGTCACCTCGTCAGGCTCCTCTCAGAGCACCA < 41bp 1 0.414708628955992 1 0.76829469203949 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664258 chr10:122664263 nonsynonymous SNV 0.997 3 26 hm5C_associated_SNPs_36145 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:122664237-122664267
64251 chr4 126398344 126398344 1 + G A SKCM 126398352 + 126398332 126398372 41 AGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT AGAGTTACAGTTAGAGGTATCAGATCTCTAGAACCAATCCT < 41bp 1 0.108967662237064 1 0.78072327375412 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126398352 chr4:126398344 nonsynonymous SNV 0.997 4 13 hm5C_associated_SNPs_36146 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126398325-126398361
64251 chr10 26994270 26994270 1 + C T SKCM 26994265 + 26994245 26994285 41 ACACAGTGGTGAAAAATACACCGATCCTTTCAAACTCGGTT ACACAGTGGTGAAAAATACACCGATTCTTTCAAACTCGGTT < 41bp 1 0.295957770776366 1 0.0592259764671326 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26994265 chr10:26994270 nonsynonymous SNV 0.995 4 26 hm5C_associated_SNPs_36147 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:26994236-26994274
64251 chr6 15487565 15487565 1 + G A SKCM 15487577 + 15487557 15487597 41 GTCAACACGGGAGAAGGAACCTGTTCAAAAACACAAAAGCA GTCAACACAGGAGAAGGAACCTGTTCAAAAACACAAAAGCA < 41bp 1 0.085498335538913 1 0.52179342508316 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15487577 chr6:15487565 nonsynonymous SNV 0.999 2 9 hm5C_associated_SNPs_36148 0 0 8 LIN28A POSTAR2 GSE39873,GSM980593 chr6:15487555-15487576
64251 chr22 40762483 40762483 1 + C T SKCM 40762482 + 40762462 40762502 41 AGGTGTATCCCCTGTTAAAACCATATGAAAGCGTGATGAAG AGGTGTATCCCCTGTTAAAACTATATGAAAGCGTGATGAAG < 41bp 1 0.623238695700251 1 0.273213624954224 experiment 0.753522608599497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ADSL ENSG00000239900 CDS Human protein_coding chr22:40762482 chr22:40762483 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_36149 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:40762446-40762627
64251 chr1 10479767 10479767 1 + C T SKCM 10479787 + 10479767 10479807 41 CCATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT TCATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGAT < 41bp 1 0.274254932904919 1 0.0946965515613556 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PGD ENSG00000142657 CDS Human protein_coding chr1:10479787 chr1:10479767 synonymous SNV . 0 1 hm5C_associated_SNPs_36150 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr17 80193902 80193902 1 + G A SKCM 80193913 + 80193893 80193933 41 GGCCGTGGTGGACGAGGGCCCCACAGGCGTCAAGGCCCCTG GGCCGTGGTAGACGAGGGCCCCACAGGCGTCAAGGCCCCTG < 41bp 1 0.583740865817098 1 0.0865874290466309 experiment 0.832518268365804 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC16A3 ENSG00000141526 CDS Human protein_coding chr17:80193913 chr17:80193902 synonymous SNV . 0 10 hm5C_associated_SNPs_36151 0 0 6 DDX3X POSTAR2 ENCODE chr17:80193875-80193962
64251 chrX 73046521 73046521 1 - C T SKCM 73046526 - 73046506 73046546 41 TGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTG TGGAGGCCCATGACCCAGAACCCAGAAAGGATAGAAGCTTG < 41bp 1 0.158584119055138 1 0.438481241464615 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046526 chrX:73046521 . . 0 26 hm5C_associated_SNPs_36154 0 0 74 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046521 73046521 1 - C T SKCM 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA GGAATCTGGAGGCCCATGACCCAGAACCCAGAAAGGATAGA < 41bp 1 0.276851989641052 1 0.371361911296844 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046521 . . 0 32 hm5C_associated_SNPs_36155 0 0 74 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046521 73046521 1 - C T SKCM 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CGGAATCTGGAGGCCCATGACCCAGAACCCAGAAAGGATAG < 41bp 1 0.262123384987426 1 0.337843775749207 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046521 . . 0 33 hm5C_associated_SNPs_36156 0 0 74 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046521 73046521 1 - C T SKCM 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGAAA < 41bp 1 0.0652219365957593 1 0.168595552444458 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046521 . . 0 39 hm5C_associated_SNPs_36157 0 0 74 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr6 168352575 168352575 1 + C T SKCM 168352591 + 168352571 168352611 41 TCCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA TCCTTGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGA < 41bp 1 0.17615893665192 1 0.248672425746918 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352591 chr6:168352575 nonsynonymous SNV 0.272 2 5 hm5C_associated_SNPs_36158 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr6 168352575 168352575 1 + C T SKCM 168352592 + 168352572 168352612 41 CCTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC CCTTGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGAC < 41bp 1 0.544142170947848 1 0.487399876117706 experiment 0.911715658104304 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352592 chr6:168352575 nonsynonymous SNV 0.272 2 4 hm5C_associated_SNPs_36159 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr6 168352575 168352575 1 + C T SKCM 168352593 + 168352573 168352613 41 CTCGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG CTTGGGGGACAGTCTGTCCCCCGACCCGTGGAAGCGGGACG < 41bp 1 0.0847955413991818 1 0.238000631332397 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient AFDN ENSG00000130396 CDS Human protein_coding chr6:168352593 chr6:168352575 nonsynonymous SNV 0.272 2 3 hm5C_associated_SNPs_36160 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr1 15978206 15978206 1 + C T SKCM 15978205 + 15978185 15978225 41 GTTTCTTTCTTCCAAGTGTTCCATCGACCTGAAGAAAAATG GTTTCTTTCTTCCAAGTGTTCTATCGACCTGAAGAAAAATG < 41bp 1 0.0858790706717715 1 0.105696976184845 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978205 chr1:15978206 synonymous SNV . 0 22 hm5C_associated_SNPs_36161 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:15978206-15978244
64251 chr9 21859377 21859377 1 + C T SKCM 21859391 + 21859371 21859411 41 ACCATACCTCAGATAGGGTCCACAGAATGGTCAGAAACCCT ACCATATCTCAGATAGGGTCCACAGAATGGTCAGAAACCCT < 41bp 1 0.250738118303769 1 0.241316199302673 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTAP ENSG00000099810 CDS Human protein_coding chr9:21859391 chr9:21859377 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_36166 0 0 1 PPIG POSTAR2 ENCODE chr9:21859370-21859449
64251 chr17 55183954 55183954 1 + C T SKCM 55183945 + 55183925 55183965 41 CGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAGGCCAGTCAG CGGTTGGCAAGGTTGCAGGTCGTGTGTGTTAGGCCAGTCAG < 41bp 1 0.442151133191911 1 0.0750397741794586 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183945 chr17:55183954 stopgain 0.003 0 30 hm5C_associated_SNPs_36167 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr17:55183936-55183966
64251 chr17 55183954 55183954 1 + C T SKCM 55183959 + 55183939 55183979 41 GCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA GCAGGTCGTGTGTGTTAGGCCAGTCAGCTCCAAGGGCAGAA < 41bp 1 0.224175833393071 1 0.0485777854919434 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183959 chr17:55183954 stopgain 0.003 0 16 hm5C_associated_SNPs_36168 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr17:55183936-55183966
64251 chr4 3101050 3101050 1 + C T SKCM 3101067 + 3101047 3101087 41 TTTCTGCTGTGCAGTGATGACGCAGAGTCAGATGTCAGGAT TTTTTGCTGTGCAGTGATGACGCAGAGTCAGATGTCAGGAT < 41bp 1 0.377925450272385 1 0.340752005577087 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3101067 chr4:3101050 synonymous SNV . 0 4 hm5C_associated_SNPs_36169 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:3101020-3101052
64251 chr20 44037095 44037095 1 + C T SKCM 44037094 + 44037074 44037114 41 TACTTGTTTTGCTCCTCTACCCGCAGGAGCTGACATGGACC TACTTGTTTTGCTCCTCTACCTGCAGGAGCTGACATGGACC < 41bp 1 0.69798905183243 1 0.649762868881226 experiment 0.60402189633514 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44037094 chr20:44037095 synonymous SNV . 0 22 hm5C_associated_SNPs_36170 0 0 1 BUD13 POSTAR2 ENCODE chr20:44037063-44037133
64251 chr1 28861654 28861654 1 + C T SKCM 28861637 + 28861617 28861657 41 TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCA TGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCTTCA < 41bp 1 0.237660167702799 1 0.309491813182831 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861637 chr1:28861654 synonymous SNV . 0 38 hm5C_associated_SNPs_36171 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:28861631-28861658
64251 chr7 151791331 151791331 1 + C T SKCM 151791339 + 151791319 151791359 41 AGTGTCACAGTTCGGTATTTCTGTTATGGGTGCCTTTTTAC AGTGTCACAGTTTGGTATTTCTGTTATGGGTGCCTTTTTAC < 41bp 1 0.23764877257358 1 0.0421455800533295 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791339 chr7:151791331 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_36172 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:151791319-151791331
64251 chr2 220412343 220412343 1 + G A SKCM 220412324 + 220412304 220412344 41 CCGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCGA CCGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCAA < 41bp 1 0.703223989539206 1 0.243986338376999 experiment 0.593552020921587 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220412324 chr2:220412343 synonymous SNV . 0 40 hm5C_associated_SNPs_36173 0 0 4 DDX3X POSTAR2 ENCODE chr2:220412296-220412352
64251 chrX 73046780 73046780 1 - C T SKCM 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGACCTGAGTTGGATGGAAGTCTC < 41bp 1 0.356132114293114 1 0.398927241563797 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046780 . . 0 20 hm5C_associated_SNPs_36175 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046780 73046780 1 - C T SKCM 73046786 - 73046766 73046806 41 AGAGGGTGGCCTGAATTGGACCGAAGGCCTGAGTTGGATGG AGAGGGTGGCCTGAATTGGACCGAAGACCTGAGTTGGATGG < 41bp 1 0.347181856227942 1 0.232086509466171 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046786 chrX:73046780 . . 0 27 hm5C_associated_SNPs_36176 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046780 73046780 1 - C T SKCM 73046797 - 73046777 73046817 41 GCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGGCCT GCCAAGAAAACAGAGGGTGGCCTGAATTGGACCGAAGACCT < 41bp 1 0.269304192636264 1 0.210192114114761 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046797 chrX:73046780 . . 0 38 hm5C_associated_SNPs_36177 0 0 96 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr5 50058997 50058997 1 + G A SKCM 50059003 + 50058983 50059023 41 TGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAA TGAACTATGATGGGAAACTGCACAAGCACCCACAACTGGAA < 41bp 1 0.692363783089497 1 0.175847321748734 experiment 0.615272433821007 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PARP8 ENSG00000151883 CDS Human protein_coding chr5:50059003 chr5:50058997 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_36179 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:50058991-50059010
64251 chr19 14568910 14568910 1 + C T SKCM 14568926 + 14568906 14568946 41 GTGGCCCCAATGCCTGGGACCAGAGCTTCACTCTGGAGCTG GTGGTCCCAATGCCTGGGACCAGAGCTTCACTCTGGAGCTG < 41bp 1 0.490645256234461 1 0.519435286521912 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14568926 chr19:14568910 synonymous SNV . 0 5 hm5C_associated_SNPs_36180 0 0 3 FMR1 POSTAR2 ENCODE chr19:14568905-14568948
64251 chr20 34092618 34092618 1 + C T SKCM 34092606 + 34092586 34092626 41 AAACCTCCCCAATGGAGGAACAATCTCTAAAACTTGATTCT AAACCTCCCCAATGGAGGAACAATCTCTAAAATTTGATTCT < 41bp 1 0.0328196239964224 1 0.136275500059128 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP250 ENSG00000126001 CDS Human protein_coding chr20:34092606 chr20:34092618 nonsynonymous SNV 0.000 0 33 hm5C_associated_SNPs_36181 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34092567-34092620
64251 chr1 156756843 156756843 1 + C T SKCM 156756842 + 156756822 156756862 41 GGACGATGCAGCCAATGCCCCCCTTGAATTCAAGATGGCAG GGACGATGCAGCCAATGCCCCTCTTGAATTCAAGATGGCAG < 41bp 1 0.158404415265233 1 0.148959159851074 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756842 chr1:156756843 synonymous SNV . 0 22 hm5C_associated_SNPs_36182 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:156756755-156756848
64251 chr19 36216190 36216190 1 + C T SKCM 36216189 + 36216169 36216209 41 CTCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCT CTCACCTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCT < 41bp 1 0.0386693613427052 1 0.0700080096721649 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216189 chr19:36216190 nonsynonymous SNV 0.837 4 22 hm5C_associated_SNPs_36184 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216190 36216190 1 + C T SKCM 36216191 + 36216171 36216211 41 CACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGT CACCTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCTGT < 41bp 1 0.127279257467931 1 0.239529132843018 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216191 chr19:36216190 nonsynonymous SNV 0.837 4 20 hm5C_associated_SNPs_36185 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216190 36216190 1 + C T SKCM 36216192 + 36216172 36216212 41 ACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTG ACCTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCTGTG < 41bp 1 0.454479563005172 1 0.491795510053635 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216192 chr19:36216190 nonsynonymous SNV 0.837 4 19 hm5C_associated_SNPs_36186 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216190 36216190 1 + C T SKCM 36216193 + 36216173 36216213 41 CCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGT CCTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCTGTGT < 41bp 1 0.147531571028897 1 0.391293287277222 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216193 chr19:36216190 nonsynonymous SNV 0.837 4 18 hm5C_associated_SNPs_36187 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216190 36216190 1 + C T SKCM 36216194 + 36216174 36216214 41 CTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGTG CTCTGTGCCAGGGGGCTCCCCGATGGTGTGCTTGCTGTGTG < 41bp 1 0.349578251777119 1 0.837104976177216 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216194 chr19:36216190 nonsynonymous SNV 0.837 4 17 hm5C_associated_SNPs_36188 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr12 6943094 6943094 1 + C T SKCM 6943099 + 6943079 6943119 41 TCCCTGGCAGATGTCCTTCTCCTGGAGGGTGTGACCTTGAC TCCCTGGCAGATGTCTTTCTCCTGGAGGGTGTGACCTTGAC < 41bp 1 0.289883198492825 1 0.803734362125397 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943099 chr12:6943094 nonsynonymous SNV 0.259 1 16 hm5C_associated_SNPs_36190 0 0 9 BUD13 POSTAR2 ENCODE chr12:6943080-6943118
64251 chr20 42695407 42695407 1 + G A SKCM 42695411 + 42695391 42695431 41 TTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAA TTCCCCAGCAGCTCGGAATCCTGCTCACCTGGCCCATCCAA < 41bp 1 0.471840630406378 1 0.187154740095139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695411 chr20:42695407 nonsynonymous SNV 0.278 3 17 hm5C_associated_SNPs_36191 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chrX 2632473 2632473 1 + C T SKCM 2632489 + 2632469 2632509 41 GTTTCGATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT GTTTTGATTTATCCGATGCCCTTCCTGGTGAGTATCAACAT < 41bp 1 0.0864971344439408 1 0.0728123486042023 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2632489 chrX:2632473 synonymous SNV . 0 5 hm5C_associated_SNPs_36192 0 0 5 DDX3X POSTAR2 ENCODE chrX:2632462-2632478
64251 chr6 158900900 158900900 1 + C T SKCM 158900920 + 158900900 158900940 41 CAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGT TAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGT < 41bp 1 0.195572932657937 1 0.167676717042923 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158900920 chr6:158900900 stopgain 0.999 1 1 hm5C_associated_SNPs_36193 0 0 5 BUD13 POSTAR2 ENCODE chr6:158900761-158900915
64251 chr22 29695762 29695762 1 + C T SKCM 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CTCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG < 41bp 1 0.413313785599767 1 0.224251925945282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695762 nonsynonymous SNV 0.994 2 2 hm5C_associated_SNPs_36194 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr20 30898673 30898673 1 + C T SKCM 30898670 + 30898650 30898690 41 AATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA AATTCCAGGAAGAGATTGCTCGGTTCAAGGCCCAGCTGGAA < 41bp 1 0.417471987075022 1 0.743875622749329 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898670 chr20:30898673 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_36196 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:30898663-30898687
64251 chr2 114670797 114670797 1 + C T SKCM 114670803 + 114670783 114670823 41 CCACAGTTTATCATCCCTTCCTGTAAGTATTTCTTTTAAGC CCACAGTTTATCATTCCTTCCTGTAAGTATTTCTTTTAAGC < 41bp 1 0.417682640777697 1 0.349373340606689 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114670803 chr2:114670797 nonsynonymous SNV . 0 15 hm5C_associated_SNPs_36207 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:114670752-114670801
64251 chr1 16199342 16199342 1 + C T SKCM 16199355 + 16199335 16199375 41 AATTCTTCCCAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT AATTCTTTCCAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT < 41bp 1 0.475960693291631 1 0.820903778076172 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199355 chr1:16199342 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_36208 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:16199300-16199360
64251 chr19 55823374 55823374 1 + C T SKCM 55823357 + 55823337 55823377 41 CCCACCCGGCCGCCCAGACCCAGAGCTGAGCAGCTCTCCCC CCCACCCGGCCGCCCAGACCCAGAGCTGAGCAGCTCTTCCC < 41bp 1 0.784914089692303 1 0.844070076942444 experiment 0.430171820615393 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55823357 chr19:55823374 nonsynonymous SNV 0.990 0 38 hm5C_associated_SNPs_36209 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:55823361-55823398
64251 chrX 73046763 73046763 1 - C T SKCM 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAATCTCAAGGCTTGAGTTAGAAGTCTTAAGA < 41bp 1 0.504711903662078 1 0.176859229803085 experiment 0.990576192675845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046763 . . 0 12 hm5C_associated_SNPs_36210 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chrX 73046763 73046763 1 - C T SKCM 73046779 - 73046759 73046799 41 GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAGTCTC GGCCTGAATTGGACCGAAGGCCTGAGTTGGATGGAAATCTC < 41bp 1 0.314430547250583 1 0.44472473859787 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046779 chrX:73046763 . . 0 37 hm5C_associated_SNPs_36211 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046759-73046787
64251 chr16 30081507 30081507 1 + C T SKCM 30081505 + 30081485 30081525 41 TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG TGGGGCTGCTGCCAGCGAGTCCTTCTTCGTCTCTAACCACG < 41bp 1 0.0216589764884017 1 0.0258320868015289 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081505 chr16:30081507 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_36213 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081507 30081507 1 + C T SKCM 30081506 + 30081486 30081526 41 GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC GGGGCTGCTGCCAGCGAGTCCTTCTTCGTCTCTAACCACGC < 41bp 1 0.146492686023279 1 0.0939122438430786 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081506 chr16:30081507 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_36214 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081507 30081507 1 + C T SKCM 30081509 + 30081489 30081529 41 GCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCCTA GCTGCTGCCAGCGAGTCCTTCTTCGTCTCTAACCACGCCTA < 41bp 1 0.452537142804078 1 0.152098834514618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081509 chr16:30081507 nonsynonymous SNV 0.997 4 19 hm5C_associated_SNPs_36215 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr7 99956641 99956641 1 + C T SKCM 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACTCGG < 41bp 1 0.542505517756303 1 0.702185571193695 experiment 0.914988964487394 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956641 nonsynonymous SNV 0.000 1 38 hm5C_associated_SNPs_36216 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956641 99956641 1 + C T SKCM 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTATTTCTGCCGAGTCGAGCTGGACACTCGGAGATCAGGG < 41bp 1 0.752210121669593 1 0.6116623878479 experiment 0.495579756660815 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956641 nonsynonymous SNV 0.000 1 29 hm5C_associated_SNPs_36217 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956641 99956641 1 + C T SKCM 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCGAGTCGAGCTGGACACTCGGAGATCAGGGAGGCA < 41bp 1 0.1471778398358 1 0.0293949842453003 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956641 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_36218 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr19 19217149 19217149 1 + C T SKCM 19217131 + 19217111 19217151 41 CGCACTGGCTGGAACGACAGCCGCTTCACTGACCTACCCCC CGCACTGGCTGGAACGACAGCCGCTTCACTGACCTACCTCC < 41bp 1 0.205781411465307 1 0.15375080704689 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19217131 chr19:19217149 nonsynonymous SNV 0.994 5 39 hm5C_associated_SNPs_36219 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19217128-19217178
64251 chr10 122664264 122664264 1 + C T SKCM 122664258 + 122664238 122664278 41 AGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCA AGTCACTACTGTCACCTCGTCAGGCCTCTCTCAGAGCACCA < 41bp 1 0.395721348699443 1 0.693491816520691 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664258 chr10:122664264 nonsynonymous SNV 0.995 4 27 hm5C_associated_SNPs_36220 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:122664237-122664267
64251 chr11 47256923 47256923 1 + C T SKCM 47256916 + 47256896 47256936 41 AGTGGGACTGCCCCCTGGGCCTGATCCCGCACCCTCACCGT AGTGGGACTGCCCCCTGGGCCTGATCCTGCACCCTCACCGT < 41bp 1 0.504069820399295 1 0.0571065247058868 experiment 0.991860359201409 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256916 chr11:47256923 nonsynonymous SNV 0.380 0 28 hm5C_associated_SNPs_36225 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:47256909-47256929
64251 chr17 38318286 38318286 1 + G A SKCM 38318298 + 38318278 38318318 41 CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG CAAAGTGGATAAAAAGGGCCCTAAGCATTTGGATGATGATG < 41bp 1 0.157397820442399 1 0.0588571429252625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318298 chr17:38318286 nonsynonymous SNV 0.995 1 9 hm5C_associated_SNPs_36226 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38318262-38318304
64251 chr17 38318286 38318286 1 + G A SKCM 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGATAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT < 41bp 1 0.127986927711749 1 0.113242626190186 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318286 nonsynonymous SNV 0.995 1 4 hm5C_associated_SNPs_36227 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38318262-38318304
64251 chr4 39757304 39757304 1 + C T SKCM 39757323 + 39757303 39757343 41 TCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATA TTCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATA < 41bp 1 0.776269585694595 1 0.738714277744293 experiment 0.447460828610809 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBE2K ENSG00000078140 CDS Human protein_coding chr4:39757323 chr4:39757304 nonsynonymous SNV 0.999 4 2 hm5C_associated_SNPs_36228 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:39757271-39757308
64251 chr11 64802341 64802341 1 + C T SKCM 64802321 + 64802301 64802341 41 TTGTCCTGGGGGCCGTAGGCCGGTTTGAAGCCTCAGTGATC TTGTCCTGGGGGCCGTAGGCCGGTTTGAAGCCTCAGTGATT < 41bp 1 0.319874427588901 1 0.38874763250351 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802321 chr11:64802341 synonymous SNV . 0 41 hm5C_associated_SNPs_36229 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64802325-64802363
64251 chr1 70700397 70700397 1 + G C SKCM 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CACTGCCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT < 41bp 1 0.290356667736812 1 0.0855535864830017 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700397 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_36230 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:70700376-70700412
64251 chr7 101840359 101840359 1 + C T SKCM 101840378 + 101840358 101840398 41 TCGCCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATC TTGCCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATC < 41bp 1 0.131886610685531 1 0.106064587831497 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101840378 chr7:101840359 synonymous SNV . 0 2 hm5C_associated_SNPs_36232 0 0 3 BUD13 POSTAR2 ENCODE chr7:101840321-101840365
64251 chr5 10415637 10415637 1 + G A SKCM 10415639 + 10415619 10415659 41 AATGTCGTTTTGGACGGGGACTGCCAAAATCCATGAGCTCT AATGTCGTTTTGGACGGGAACTGCCAAAATCCATGAGCTCT < 41bp 1 0.265429745084909 1 0.333441823720932 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10415639 chr5:10415637 synonymous SNV . 0 19 hm5C_associated_SNPs_36233 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10415620-10415660
64251 chr17 55183968 55183968 1 + C T SKCM 55183959 + 55183939 55183979 41 GCAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGCAGAA GCAGGTCGTGTGTGTCAGGCCAGTCAGCTTCAAGGGCAGAA < 41bp 1 0.177558253921428 1 0.0517535805702209 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55183959 chr17:55183968 synonymous SNV . 0 30 hm5C_associated_SNPs_36234 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:55183945-55183973
64251 chr17 57738896 57738896 1 + C T SKCM 57738906 + 57738886 57738926 41 ACTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAAATAC ACTTTGGTATTCTTTTGGACCAGGGACAGCTCAACAAATAC < 41bp 1 0.630439008832837 1 0.562865316867828 experiment 0.739121982334326 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57738906 chr17:57738896 synonymous SNV . 0 11 hm5C_associated_SNPs_36235 0 0 42 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:57738805-57738925
64251 chr17 57057653 57057653 1 + G A SKCM 57057658 + 57057638 57057678 41 AGAACTCTTTTCAAGGAGGGCAAGAAGATGGTGGGGATGAT AGAACTCTTTTCAAGAAGGGCAAGAAGATGGTGGGGATGAT < 41bp 1 0.405997868808204 1 0.324874341487885 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPM1E ENSG00000175175 CDS Human protein_coding chr17:57057658 chr17:57057653 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_36237 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:57057648-57057686
64251 chr12 3389554 3389554 1 + G A SKCM 3389553 + 3389533 3389573 41 CCCTCCGCCTGGCAGGTGAACGAGAACGCCAAGAAGGACCT CCCTCCGCCTGGCAGGTGAACAAGAACGCCAAGAAGGACCT < 41bp 1 0.698039813336539 1 0.532885849475861 experiment 0.603920373326923 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3389553 chr12:3389554 nonsynonymous SNV 0.975 2 22 hm5C_associated_SNPs_36238 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704216 chr12:3389540-3389560
64251 chr22 44332975 44332975 1 + G A SKCM 44332984 + 44332964 44333004 41 CATCCTCAGAAGGGATGGATCCTGAGGTCGCCATGCCCAGC CATCCTCAGAAAGGATGGATCCTGAGGTCGCCATGCCCAGC < 41bp 1 0.560304152980027 1 0.0986269116401672 experiment 0.879391694039946 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332984 chr22:44332975 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_36239 0 0 3 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr6 57012296 57012296 1 + C T SKCM 57012315 + 57012295 57012335 41 CCTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGAT CTTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGAT < 41bp 1 0.481244380403576 1 0.386418700218201 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012315 chr6:57012296 synonymous SNV . 0 2 hm5C_associated_SNPs_36240 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr6:57012259-57012317
64251 chr20 52835653 52835653 1 + C T SKCM 52835659 + 52835639 52835679 41 TTGTATGCAAAATTCGGGAGCAACATAAACCTTGAAGCTGA TTGTATGCAAAATTTGGGAGCAACATAAACCTTGAAGCTGA < 41bp 1 0.663917571790176 1 0.199393004179001 experiment 0.672164856419647 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52835659 chr20:52835653 synonymous SNV . 0 15 hm5C_associated_SNPs_36241 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr20:52835560-52835685
64251 chr6 7578094 7578094 1 + C T SKCM 7578111 + 7578091 7578131 41 AGTCCCCTTCTGGGGTGATTCTGCAAGAGGTATATATGTCA AGTTCCCTTCTGGGGTGATTCTGCAAGAGGTATATATGTCA < 41bp 1 0.669147653494491 1 0.938224673271179 experiment 0.661704693011018 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7578111 chr6:7578094 nonsynonymous SNV 0.606 5 4 hm5C_associated_SNPs_36242 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7578012-7578111
64251 chr1 214503535 214503535 1 + C T SKCM 214503545 + 214503525 214503565 41 TATTGATCTCCTGTACCCAACGGAAGATAGAAATGACCGGT TATTGATCTCTTGTACCCAACGGAAGATAGAAATGACCGGT < 41bp 1 0.659309837543225 1 0.52396160364151 experiment 0.681380324913551 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214503545 chr1:214503535 synonymous SNV . 0 11 hm5C_associated_SNPs_36243 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:214503521-214503546
64251 chr12 56347547 56347547 1 + A T SKCM 56347561 + 56347541 56347581 41 TTCTTGAGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC TTCTTGTGCTAAGGGGGACACCCTTGGCCTCCAAGCCAGCC < 41bp 1 0.206303712819537 1 0.0450488924980164 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKA ENSG00000065357 CDS Human protein_coding chr12:56347561 chr12:56347547 nonsynonymous SNV 0.472 3 7 hm5C_associated_SNPs_36244 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56347534-56347557
64251 chr16 30749171 30749171 1 + C G SKCM 30749182 + 30749162 30749202 41 TCTCTCACCCCTTCTGCACCCAGCCTGACCTTGGAGGCTGG TCTCTCACCGCTTCTGCACCCAGCCTGACCTTGGAGGCTGG < 41bp 1 0.250912814464252 1 0.583790063858032 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30749182 chr16:30749171 nonsynonymous SNV 0.273 1 10 hm5C_associated_SNPs_36245 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30749099-30749174
64251 chr7 120935653 120935653 1 + G A SKCM 120935667 + 120935647 120935687 41 AATCAGGTTTGTTCTGAAATCCTTCTCAGCAGGATGTGTGC AATCAGATTTGTTCTGAAATCCTTCTCAGCAGGATGTGTGC < 41bp 1 0.0334577632342478 1 0.148045301437378 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CPED1 ENSG00000106034 CDS Human protein_coding chr7:120935667 chr7:120935653 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_36246 0 0 3 IGF2BP1 POSTAR2 ENCODE chr7:120935612-120935689
64251 chr1 45270013 45270013 1 + G A SKCM 45270016 + 45269996 45270036 41 CCTCTCCCATGACAGCGGAACAGAACCCGGCCCCCCTGGCC CCTCTCCCATGACAGCGAAACAGAACCCGGCCCCCCTGGCC < 41bp 1 0.695496441320924 1 0.831506371498108 experiment 0.609007117358152 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45270016 chr1:45270013 nonsynonymous SNV 0.998 0 18 hm5C_associated_SNPs_36247 0 0 9 EFTUD2 POSTAR2 ENCODE chr1:45270006-45270032
64251 chr11 63449115 63449115 1 + G C SKCM 63449096 + 63449076 63449116 41 TTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGA TTTCACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGCA < 41bp 1 0.451580868825653 1 0.208888083696365 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RTN3 ENSG00000133318 CDS Human protein_coding chr11:63449096 chr11:63449115 nonsynonymous SNV 0.998 2 40 hm5C_associated_SNPs_36249 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:63449100-63449120
64251 chr11 63449115 63449115 1 + G C SKCM 63449100 + 63449080 63449120 41 ACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGGAGCCG ACCCTTCTCCCACCCTCGCTCGCGTAGCCATGGCGCAGCCG < 41bp 1 0.671173324248058 1 0.192402929067612 experiment 0.657653351503883 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RTN3 ENSG00000133318 CDS Human protein_coding chr11:63449100 chr11:63449115 nonsynonymous SNV 0.998 2 36 hm5C_associated_SNPs_36250 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:63449100-63449120
64251 chr1 154962690 154962690 1 + C T SKCM 154962708 + 154962688 154962728 41 CCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC CCTCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC < 41bp 1 0.296001352038779 1 0.192055284976959 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962708 chr1:154962690 nonsynonymous SNV 0.986 1 3 hm5C_associated_SNPs_36252 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154962665-154962710
64251 chr1 154962691 154962691 1 + C T SKCM 154962708 + 154962688 154962728 41 CCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC CCCTTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC < 41bp 1 0.268854571801438 1 0.184926390647888 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962708 chr1:154962691 nonsynonymous SNV 0.988 2 4 hm5C_associated_SNPs_36253 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154962665-154962710
64251 chr19 13054393 13054393 1 + G A SKCM 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACAATGAGGCATACGCTGAGGAGTTTGGCAACGA < 41bp 1 0.564416448540365 1 0.139154613018036 experiment 0.87116710291927 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054393 nonsynonymous SNV 0.952 2 10 hm5C_associated_SNPs_36255 0 0 25 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:13054347-13054404
64251 chr19 13054393 13054393 1 + G A SKCM 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACAATGAGGCATACGCTGAGGAGTTTGGCAACGAGA < 41bp 1 0.691708780076702 1 0.24506202340126 experiment 0.616582439846597 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054393 nonsynonymous SNV 0.952 2 8 hm5C_associated_SNPs_36256 0 0 25 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:13054347-13054404
64251 chr12 120875933 120875933 1 + G A SKCM 120875925 + 120875905 120875945 41 GGCGCTGCGGCAGTCCAGATCAAAAATGGCGGTAGTTGGTG GGCGCTGCGGCAGTCCAGATCAAAAATGACGGTAGTTGGTG < 41bp 1 0.680134753521409 1 0.367364883422852 experiment 0.639730492957183 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120875925 chr12:120875933 nonsynonymous SNV 0.142 1 29 hm5C_associated_SNPs_36275 0 0 23 UPF1 POSTAR2 GSE69586,GSM1704218 chr12:120875920-120875940
64251 chr2 224824666 224824666 1 + A T SKCM 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC TTTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC < 41bp 1 0.494530475555965 1 0.14020049571991 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824666 nonsynonymous SNV 0.948 1 1 hm5C_associated_SNPs_36276 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:224824650-224824682
64251 chr18 48604711 48604711 1 + G A SKCM 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCTGGGGACCAGATTACCCAAGACAGAGCA < 41bp 1 0.413381793688056 1 0.594128489494324 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604711 synonymous SNV . 0 22 hm5C_associated_SNPs_36277 1 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:48604684-48604713
64251 chr4 74308046 74308046 1 + C T SKCM 74308041 + 74308021 74308061 41 ATGAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACA ATGAGATAGCAAGAAGGCATCCCTTTCTGTATGCACCTACA < 41bp 1 0.0910663393327111 1 0.0345560908317566 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AFP ENSG00000081051 CDS Human protein_coding chr4:74308041 chr4:74308046 synonymous SNV . 0 26 hm5C_associated_SNPs_36278 0 0 5 IGF2BP3 POSTAR2 ENCODE chr4:74308023-74308086
64251 chr14 105180803 105180803 1 + C T SKCM 105180798 + 105180778 105180818 41 CCCCCAGCCCTTGGAGGGGGCCTGGCCGGTGACTCTGGGAG CCCCCAGCCCTTGGAGGGGGCCTGGTCGGTGACTCTGGGAG < 41bp 1 0.125619566689751 1 0.210346639156342 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105180798 chr14:105180803 nonsynonymous SNV 0.982 1 26 hm5C_associated_SNPs_36281 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:105180791-105180814
64251 chr1 179851740 179851740 1 + C T SKCM 179851757 + 179851737 179851777 41 CCTCAAAATGGCGGCAGCAGCGATGCGCCTGCGTACAGAAC CCTTAAAATGGCGGCAGCAGCGATGCGCCTGCGTACAGAAC < 41bp 1 0.637733760352571 1 0.308398097753525 experiment 0.724532479294857 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TOR1AIP1 ENSG00000143337 CDS Human protein_coding chr1:179851757 chr1:179851740 stopgain 0.999 0 4 hm5C_associated_SNPs_36287 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:179851739-179851740
64251 chr11 67804056 67804056 1 + G A SKCM 67804064 + 67804044 67804084 41 ACTACTTGTATCGGTGACGCCCCACCGGCCCGCAGCCCCTG ACTACTTGTATCAGTGACGCCCCACCGGCCCGCAGCCCCTG < 41bp 1 0.116243014729272 1 0.169655561447144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFS8 ENSG00000110717 CDS Human protein_coding chr11:67804064 chr11:67804056 nonsynonymous SNV 0.841 5 13 hm5C_associated_SNPs_36293 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67804019-67804090
64251 chrX 73046067 73046067 1 - G A SKCM 73046069 - 73046049 73046089 41 GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATGTGAAGA GGAAAAAAAAGTGCCAGGCTCTTTAGAGAAAAATGTGAAGA < 41bp 1 0.104181348689015 1 0.491788625717163 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046069 chrX:73046067 . . 0 23 hm5C_associated_SNPs_36294 0 0 83 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046067 73046067 1 - G A SKCM 73046075 - 73046055 73046095 41 TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATG TGTTGGGGAAAAAAAAGTGCCAGGCTCTTTAGAGAAAAATG < 41bp 1 0.240505662213467 1 0.242459177970886 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046075 chrX:73046067 . . 0 29 hm5C_associated_SNPs_36295 0 0 83 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046067 73046067 1 - G A SKCM 73046076 - 73046056 73046096 41 TTGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAAT TTGTTGGGGAAAAAAAAGTGCCAGGCTCTTTAGAGAAAAAT < 41bp 1 0.109271259701581 1 0.289082527160645 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046076 chrX:73046067 . . 0 30 hm5C_associated_SNPs_36296 0 0 83 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr9 135919202 135919202 1 + C T SKCM 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCCGGCTCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.0552421648085524 1 0.0388269126415253 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919202 nonsynonymous SNV 0.444 0 8 hm5C_associated_SNPs_36297 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr12 62938739 62938739 1 + T A SKCM 62938730 + 62938710 62938750 41 ATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGAT ATGGGGAGCAGAAGCTTTAACTTCTCTTAATAAAGCAGGAT < 41bp 1 0.204274608764404 1 0.22365528345108 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62938730 chr12:62938739 nonsynonymous SNV 0.996 4 30 hm5C_associated_SNPs_36298 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:62938723-62938744
64251 chr12 104492139 104492139 1 + C T SKCM 104492140 + 104492120 104492160 41 GAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGG GAAAGAGACTCCTTCAAATTCAGTGGCCACAGTGAAAGCGG < 41bp 1 0.582520101369266 1 0.560189485549927 experiment 0.834959797261469 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104492140 chr12:104492139 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_36299 0 0 1 FUS POSTAR2 SRX029328 chr12:104492126-104492151
64251 chr1 161199501 161199501 1 + C T SKCM 161199507 + 161199487 161199527 41 GGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCCAGCATTT GGCTCCCTTTGAACTCGGCCCAATCTTTGGTCCCAGCATTT < 41bp 1 0.043821783567088 1 0.0767340362071991 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199507 chr1:161199501 nonsynonymous SNV 0.000 2 15 hm5C_associated_SNPs_36300 0 0 1 UPF1 POSTAR2 ENCODE chr1:161199483-161199575
64251 chr1 242052799 242052799 1 + C T SKCM 242052812 + 242052792 242052832 41 AAGAAACCCCTGTCCCCAGTCAGAGATAACATCCAACTAAC AAGAAACTCCTGTCCCCAGTCAGAGATAACATCCAACTAAC < 41bp 1 0.718555357119246 1 0.953845798969269 experiment 0.562889285761508 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242052812 chr1:242052799 nonsynonymous SNV 0.993 3 8 hm5C_associated_SNPs_36301 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:242052780-242052800
64251 chr21 46900038 46900038 1 + C T SKCM 46900048 + 46900028 46900068 41 GCCTCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC GCCTCCAGGGTCCCCAGGACCCTCCTTCAGACACGACAAGC < 41bp 1 0.0563877953301571 1 0.0442568063735962 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900048 chr21:46900038 nonsynonymous SNV 0.800 4 11 hm5C_associated_SNPs_36302 0 0 4 BUD13 POSTAR2 ENCODE chr21:46899984-46900042
64251 chr19 45535846 45535846 1 + C T SKCM 45535862 + 45535842 45535882 41 TTCTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT TTCTTCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT < 41bp 1 0.0914500413515334 1 0.105074971914291 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RELB ENSG00000104856 CDS Human protein_coding chr19:45535862 chr19:45535846 nonsynonymous SNV 0.990 5 5 hm5C_associated_SNPs_36303 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45535839-45535859
64251 chr19 50285871 50285871 1 + C T SKCM 50285882 + 50285862 50285902 41 TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCCC TGACCTGGCTAGCCGCAACCCCACCTTCATGTGCCTGGCCC < 41bp 1 0.2418554534482 1 0.0644524097442627 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285882 chr19:50285871 synonymous SNV . 0 10 hm5C_associated_SNPs_36304 0 0 4 DDX24 POSTAR2 ENCODE chr19:50285859-50285968
64251 chr17 75398220 75398220 1 + C T SKCM 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTTCGAGC < 41bp 1 0.32356665989552 1 0.243051707744598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398220 synonymous SNV . 0 36 hm5C_associated_SNPs_36305 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:75398200-75398220
64251 chr21 46900039 46900039 1 + C T SKCM 46900048 + 46900028 46900068 41 GCCTCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC GCCTCCAGGGCTCCCAGGACCCTCCTTCAGACACGACAAGC < 41bp 1 0.0458634457470133 1 0.0569009184837341 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900048 chr21:46900039 nonsynonymous SNV 0.793 2 12 hm5C_associated_SNPs_36306 0 0 3 BUD13 POSTAR2 ENCODE chr21:46899984-46900042
64251 chrX 70516441 70516441 1 + C T SKCM 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCGTCCTGTGACTGTGGAGCTCATGGACCAGTTAGATGAT < 41bp 1 0.260317999581776 1 0.106545180082321 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516441 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_36307 0 0 52 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr15 25222160 25222160 1 + G A SKCM 25222166 + 25222146 25222186 41 TGTCCGAGGAGTTGGGGGACCATCCCAGCAGGTGAGGAACC TGTCCGAGGAGTTGAGGGACCATCCCAGCAGGTGAGGAACC < 41bp 1 0.13006514616044 1 0.159327447414398 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25222166 chr15:25222160 nonsynonymous SNV 0.967 3 15 hm5C_associated_SNPs_36308 0 0 3 DDX3X POSTAR2 ENCODE chr15:25222120-25222176
64251 chr4 41652434 41652434 1 + G A SKCM 41652424 + 41652404 41652444 41 TTATAGGTAGACGGGAAAGTCAGTGTGAATGGAGAGACGGT TTATAGGTAGACGGGAAAGTCAGTGTGAATAGAGAGACGGT < 41bp 1 0.363499537882774 1 0.473977267742157 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMCH1 ENSG00000064042 CDS Human protein_coding chr4:41652424 chr4:41652434 nonsynonymous SNV 0.938 4 31 hm5C_associated_SNPs_36313 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr4:41652431-41652452
64251 chr10 73056476 73056476 1 + C T SKCM 73056491 + 73056471 73056511 41 TATTCCAGCTGCATACCACTCTGGCAGAGGTGAGGGAAGTC TATTCTAGCTGCATACCACTCTGGCAGAGGTGAGGGAAGTC < 41bp 1 0.440326579521228 1 0.444851607084274 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNC5B ENSG00000107731 CDS Human protein_coding chr10:73056491 chr10:73056476 stopgain 0.998 1 6 hm5C_associated_SNPs_36315 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:73056471-73056493
64251 chr3 9489407 9489407 1 + C T SKCM 9489393 + 9489373 9489413 41 ATTGCTGCAGAAAAACTAGTCCCCAAGCCACCTCCAGCAAA ATTGCTGCAGAAAAACTAGTCCCCAAGCCACCTCTAGCAAA < 41bp 1 0.495062420559232 1 0.182265192270279 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9489393 chr3:9489407 nonsynonymous SNV 1.000 5 35 hm5C_associated_SNPs_36316 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr3:9489380-9489420
64251 chrX 7171306 7171306 1 + G A SKCM 7171312 + 7171292 7171332 41 GCAGCATCAAGGCCGAACATCATCCTGGTGATGGCTGACGA GCAGCATCAAGGCCAAACATCATCCTGGTGATGGCTGACGA < 41bp 1 0.292431980773345 1 0.0695810616016388 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STS ENSG00000101846 CDS Human protein_coding chrX:7171312 chrX:7171306 synonymous SNV . 0 15 hm5C_associated_SNPs_36317 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:7171300-7171320
64251 chr5 156816274 156816274 1 + C T SKCM 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATTCTGAC < 41bp 1 0.264374020424774 1 0.652402877807617 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816274 synonymous SNV . 0 36 hm5C_associated_SNPs_36318 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr11 126143258 126143258 1 + C T SKCM 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAGTCGATGCTCCTTCCCTGGACCTCCGGTTCA < 41bp 1 0.348280727965931 1 0.0477394163608551 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143258 nonsynonymous SNV 0.058 1 23 hm5C_associated_SNPs_36319 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr11:126143244-126143268
64251 chrX 73046879 73046879 1 - C T SKCM 73046871 - 73046851 73046891 41 GAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAGAA GAGGACTAAGATAGAAAGCCCATGTTCCAAGATAGATAGAA < 41bp 1 0.0805013161208821 1 0.0731796622276306 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046871 chrX:73046879 . . 0 13 hm5C_associated_SNPs_36320 0 0 73 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046879 73046879 1 - C T SKCM 73046873 - 73046853 73046893 41 CCGAGGACTAAGATGGAAAGCCCATGTTCCAAGATAGATAG CCGAGGACTAAGATAGAAAGCCCATGTTCCAAGATAGATAG < 41bp 1 0.156605166848055 1 0.0538758337497711 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046873 chrX:73046879 . . 0 15 hm5C_associated_SNPs_36321 0 0 73 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046879 73046879 1 - C T SKCM 73046893 - 73046873 73046913 41 GATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAGC GATGGTTTGAGACTTGAGACCCGAGGACTAAGATAGAAAGC < 41bp 1 0.185583134598403 1 0.468757331371307 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046893 chrX:73046879 . . 0 35 hm5C_associated_SNPs_36322 0 0 73 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chrX 73046879 73046879 1 - C T SKCM 73046894 - 73046874 73046914 41 AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATGGAAAG AGATGGTTTGAGACTTGAGACCCGAGGACTAAGATAGAAAG < 41bp 1 0.407775456495304 1 0.172441363334656 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046894 chrX:73046879 . . 0 36 hm5C_associated_SNPs_36323 0 0 73 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046860-73046880
64251 chr11 126143259 126143259 1 + C T SKCM 126143256 + 126143236 126143276 41 CCTGGCCGTAGTCGATGCTCCTCCCCTGGACCTCCGGTTCA CCTGGCCGTAGTCGATGCTCCTCTCCTGGACCTCCGGTTCA < 41bp 1 0.37951420299069 1 0.0509857833385468 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126143256 chr11:126143259 nonsynonymous SNV 0.046 2 24 hm5C_associated_SNPs_36324 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr11:126143244-126143268
64251 chr19 36370325 36370325 1 + C T SKCM 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC CGCTTTCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC < 41bp 1 0.454345918014297 1 0.0999417901039124 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370340 chr19:36370325 synonymous SNV . 0 6 hm5C_associated_SNPs_36325 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36370316-36370342
64251 chr14 23944952 23944952 1 + C T SKCM 23944972 + 23944952 23944992 41 CGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAG TGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAG < 41bp 1 0.353313926969129 1 0.45010244846344 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NGDN ENSG00000129460 CDS Human protein_coding chr14:23944972 chr14:23944952 nonsynonymous SNV 0.990 1 1 hm5C_associated_SNPs_36326 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:23944940-23944960
64251 chr17 40716081 40716081 1 + C T SKCM 40716079 + 40716059 40716099 41 TCCTTGACTTTTGATGTCATCCCCCTGCTGGACCCCTATGG TCCTTGACTTTTGATGTCATCCTCCTGCTGGACCCCTATGG < 41bp 1 0.0787377694989617 1 0.264262139797211 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40716079 chr17:40716081 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_36327 0 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr17:40716055-40716085
64251 chr17 75398213 75398213 1 + C T SKCM 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCCCACCCCGGAGGGTCCAGACTCTCCTACTCCGAGC < 41bp 1 0.369190278443374 1 0.152830004692078 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398213 nonsynonymous SNV 0.417 2 29 hm5C_associated_SNPs_36328 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:75398200-75398220
64251 chr1 233489663 233489663 1 + C T SKCM 233489675 + 233489655 233489695 41 GCCCATTCCATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA GCCCATTCTATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA < 41bp 1 0.355158530629972 1 0.138640016317368 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233489675 chr1:233489663 nonsynonymous SNV 0.963 5 9 hm5C_associated_SNPs_36332 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:233489658-233489681
64251 chr17 80521235 80521235 1 + C T SKCM 80521253 + 80521233 80521273 41 CACATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCA CATATTCAGGTTCCCGAGCACAAACATCAAGATAACGTTCA < 41bp 1 0.115837178653992 1 0.108410328626633 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80521253 chr17:80521235 nonsynonymous SNV 0.959 2 3 hm5C_associated_SNPs_36333 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80521209-80521239
64251 chr19 56153915 56153915 1 + C T SKCM 56153916 + 56153896 56153936 41 CCACCCCACCCTCGGTCCTCCTCTCCGGAGGCCATGGACCC CCACCCCACCCTCGGTCCTTCTCTCCGGAGGCCATGGACCC < 41bp 1 0.15118193373222 1 0.229142040014267 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF580 ENSG00000213015 CDS Human protein_coding chr19:56153916 chr19:56153915 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_36334 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56153881-56153936
64251 chr7 74103493 74103493 1 + G A SKCM 74103486 + 74103466 74103506 41 GCCCAAGTTGCAATGTCCACCCTCCCCGTTGAAGATGAGGA GCCCAAGTTGCAATGTCCACCCTCCCCATTGAAGATGAGGA < 41bp 1 0.027559530726698 1 0.138553470373154 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF2I ENSG00000077809 CDS Human other chr7:74103486 chr7:74103493 nonsynonymous SNV 0.682 0 28 hm5C_associated_SNPs_36336 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:74103460-74103500
64251 chr7 74103493 74103493 1 + G A SKCM 74103487 + 74103467 74103507 41 CCCAAGTTGCAATGTCCACCCTCCCCGTTGAAGATGAGGAG CCCAAGTTGCAATGTCCACCCTCCCCATTGAAGATGAGGAG < 41bp 1 0.391033662694378 1 0.144692152738571 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2I ENSG00000077809 CDS Human other chr7:74103487 chr7:74103493 nonsynonymous SNV 0.682 0 27 hm5C_associated_SNPs_36337 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:74103460-74103500
64251 chr17 72764748 72764748 1 + C T SKCM 72764746 + 72764726 72764766 41 GAAACGCAGCAGCAAACGGGCCCCGCAGATGGACTGGAGCA GAAACGCAGCAGCAAACGGGCCTCGCAGATGGACTGGAGCA < 41bp 1 0.0809520770446978 1 0.0971950590610504 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764746 chr17:72764748 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_36338 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:72764737-72764768
64251 chr19 14512303 14512303 1 + G T SKCM 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTTAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.268093565722974 1 0.0529019236564636 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512303 stopgain 0.005 0 4 hm5C_associated_SNPs_36339 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14512279-14512303
64251 chr15 22993144 22993144 1 + G A SKCM 22993125 + 22993105 22993145 41 CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGA CGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCAA < 41bp 1 0.257214508561802 1 0.090857058763504 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993125 chr15:22993144 nonsynonymous SNV . 0 40 hm5C_associated_SNPs_36340 0 0 2 FXR2 POSTAR2 ENCODE chr15:22993066-22993149
64251 chr15 22993144 22993144 1 + G A SKCM 22993126 + 22993106 22993146 41 GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCGAG GGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCTCATCAAG < 41bp 1 0.384326817063206 1 0.345474392175674 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22993126 chr15:22993144 nonsynonymous SNV . 0 39 hm5C_associated_SNPs_36341 0 0 2 FXR2 POSTAR2 ENCODE chr15:22993066-22993149
64251 chr19 14512302 14512302 1 + T C SKCM 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTCGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.241054916948652 1 0.0478146970272064 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512302 synonymous SNV . 0 3 hm5C_associated_SNPs_36342 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14512279-14512303
64251 chr3 49736478 49736478 1 + C T SKCM 49736459 + 49736439 49736479 41 TTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA TTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCTA < 41bp 1 0.596742000234492 1 0.241994440555573 experiment 0.806515999531016 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736459 chr3:49736478 nonsynonymous SNV 1.000 5 40 hm5C_associated_SNPs_36343 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:49736460-49736480
64251 chr7 44806154 44806154 1 + C T SKCM 44806140 + 44806120 44806160 41 CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGCCAAGCG CAAACCCTCCCCCAGCGTCCCGGCAGTCCTTGGGTCAAGCG < 41bp 1 0.616619006797984 1 0.326548904180527 experiment 0.766761986404031 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806140 chr7:44806154 synonymous SNV . 0 35 hm5C_associated_SNPs_36353 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44806112-44806158
64251 chr15 91456115 91456115 1 + C T SKCM 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACGTTCCCAAGGAGCCCCCCGTGCTGCG < 41bp 1 0.737908570605848 1 0.955120861530304 experiment 0.524182858788304 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456115 synonymous SNV . 0 18 hm5C_associated_SNPs_36357 0 0 3 DDX24 POSTAR2 ENCODE chr15:91456106-91456132
64251 chr19 50339161 50339161 1 + G A SKCM 50339146 + 50339126 50339166 41 CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGACCAAC < 41bp 1 0.382087516271515 1 0.121413469314575 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339146 chr19:50339161 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_36358 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339161 50339161 1 + G A SKCM 50339147 + 50339127 50339167 41 TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGACCAACC < 41bp 1 0.129934669676932 1 0.0744988322257996 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339147 chr19:50339161 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_36359 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339161 50339161 1 + G A SKCM 50339148 + 50339128 50339168 41 CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGACCAACCC < 41bp 1 0.377144374861274 1 0.113219499588013 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339148 chr19:50339161 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_36360 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339161 50339161 1 + G A SKCM 50339149 + 50339129 50339169 41 CTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT CTGGACCCATCCTTCGGCCCCAGAACCCTGGGACCAACCCT < 41bp 1 0.422572148623459 1 0.269625246524811 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339149 chr19:50339161 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_36361 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339161 50339161 1 + G A SKCM 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TCGGCCCCAGAACCCTGGGACCAACCCTCAGCTGCGAAGCC < 41bp 1 0.0201920684975995 1 0.0230116844177246 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339161 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_36362 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339161 50339161 1 + G A SKCM 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT CGGCCCCAGAACCCTGGGACCAACCCTCAGCTGCGAAGCCT < 41bp 1 0.143150497029389 1 0.0487706959247589 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339161 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_36363 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 19308364 19308364 1 + C T SKCM 19308370 + 19308350 19308390 41 CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC CCAGACGAGCGCGGTTTCACCCCCCTCATCTGGGCCTCCGC < 41bp 1 0.353125303089394 1 0.0950374603271484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308370 chr19:19308364 synonymous SNV . 0 15 hm5C_associated_SNPs_36365 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr19 19308364 19308364 1 + C T SKCM 19308371 + 19308351 19308391 41 CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC CAGACGAGCGCGGTTTCACCCCCCTCATCTGGGCCTCCGCC < 41bp 1 0.288088347040477 1 0.11310550570488 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308371 chr19:19308364 synonymous SNV . 0 14 hm5C_associated_SNPs_36366 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr8 27516389 27516389 1 + C T SKCM 27516409 + 27516389 27516429 41 CCACGGGATCCAGCGGAAGACAGACGAGGAGACCCTGACCC TCACGGGATCCAGCGGAAGACAGACGAGGAGACCCTGACCC < 41bp 1 0.619986092800831 1 0.739807486534119 experiment 0.760027814398339 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516409 chr8:27516389 synonymous SNV . 0 1 hm5C_associated_SNPs_36368 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:27516351-27516389
64251 chr9 72003127 72003127 1 + C A SKCM 72003140 + 72003120 72003160 41 ACTGGATCTGGCTGCAGTGACTCTGAGGAGAGGCTTGAGAT ACTGGATATGGCTGCAGTGACTCTGAGGAGAGGCTTGAGAT < 41bp 1 0.596603235458229 1 0.375360459089279 experiment 0.806793529083541 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM189A2 ENSG00000135063 CDS Human protein_coding chr9:72003140 chr9:72003127 nonsynonymous SNV 0.994 0 8 hm5C_associated_SNPs_36375 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:72003100-72003128
64251 chr19 11213363 11213363 1 + G A SKCM 11213368 + 11213348 11213388 41 ACCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTGTCAA ACCTGCAAATCCGGGAACTTCAGCTGTGGGGGCCGTGTCAA < 41bp 1 0.612715108851848 1 0.730235993862152 experiment 0.774569782296304 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11213368 chr19:11213363 nonsynonymous SNV 0.244 2 16 hm5C_associated_SNPs_36378 0 0 8 BUD13 POSTAR2 ENCODE chr19:11213337-11213391
64251 chr13 50586079 50586079 1 + G A SKCM 50586083 + 50586063 50586103 41 TCTGGTAGGATGTGATGGAGCTGCTTGAAGAAGATCTCACA TCTGGTAGGATGTGATAGAGCTGCTTGAAGAAGATCTCACA < 41bp 1 0.433519269078616 1 0.0494876801967621 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM13 ENSG00000204977 CDS Human protein_coding chr13:50586083 chr13:50586079 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_36380 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr13:50586069-50586104
64251 chr12 31236892 31236892 1 + C T SKCM 31236904 + 31236884 31236924 41 GTCTTCTTCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG GTCTTCTTTCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTG < 41bp 1 0.698444824915741 1 0.3735591173172 experiment 0.603110350168518 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31236904 chr12:31236892 nonsynonymous SNV 0.007 2 9 hm5C_associated_SNPs_36382 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:31236870-31236895
64251 chr13 113479873 113479873 1 + G A SKCM 113479892 + 113479872 113479912 41 AGTCGGAAAGGCAGAGGAATCTGGTATGGAGAATCACTGCC AATCGGAAAGGCAGAGGAATCTGGTATGGAGAATCACTGCC < 41bp 1 0.734285815506485 1 0.531909704208374 experiment 0.53142836898703 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113479892 chr13:113479873 synonymous SNV . 0 2 hm5C_associated_SNPs_36385 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:113479840-113479880
64251 chr19 36142191 36142191 1 + C T SKCM 36142189 + 36142169 36142209 41 AATCAAGAACTACAAGACCGCCCCTTTTGACAGCCGCTTCC AATCAAGAACTACAAGACCGCCTCTTTTGACAGCCGCTTCC < 41bp 1 0.118670529925762 1 0.0698641240596771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36142189 chr19:36142191 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_36391 0 0 23 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:36142132-36142206
64251 chr1 43893239 43893239 1 + C T SKCM 43893251 + 43893231 43893271 41 CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAG CACCATTCTGTCGAGACTTACAGGCTTACGCTGGGCGTCAG < 41bp 1 0.302624320839265 1 0.898326456546783 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893251 chr1:43893239 nonsynonymous SNV 0.932 0 9 hm5C_associated_SNPs_36393 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:43893229-43893253
64251 chr16 2225900 2225900 1 + C T SKCM 2225897 + 2225877 2225917 41 ACGTCTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATCA ACGTCTGGTGGCAGCGTCTACTCTATTGCTGTGACAAATCA < 41bp 1 0.584756949336774 1 0.650840580463409 experiment 0.830486101326452 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TRAF7 ENSG00000131653 CDS Human protein_coding chr16:2225897 chr16:2225900 synonymous SNV . 0 24 hm5C_associated_SNPs_36398 0 0 4 FMR1 POSTAR2 ENCODE chr16:2225835-2225915
64251 chrX 205506 205506 1 + C T SKCM 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGCGTCCTGTCGTGCTGAA < 41bp 1 0.555457617354387 1 0.278589457273483 experiment 0.889084765291226 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205506 synonymous SNV . 0 27 hm5C_associated_SNPs_36402 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205490-205510
64251 chr11 61507965 61507965 1 + T C SKCM 61507955 + 61507935 61507975 41 CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGG CTGCTGTGAGCAGGAGGAGCCCACATACTTCGCCATCTGGG < 41bp 1 0.131194877937026 1 0.235472828149796 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507955 chr11:61507965 synonymous SNV . 0 31 hm5C_associated_SNPs_36405 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61507944-61507966
64251 chr11 61507965 61507965 1 + T C SKCM 61507980 + 61507960 61508000 41 TACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT TACTTCGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT < 41bp 1 0.169997222827344 1 0.34584105014801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507980 chr11:61507965 synonymous SNV . 0 6 hm5C_associated_SNPs_36406 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61507944-61507966
64251 chr15 91358362 91358362 1 + C T SKCM 91358367 + 91358347 91358387 41 TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTG TAGAAAGATATCTTCTAAAACGAAATCCTCCAGCATCATTG < 41bp 1 0.67407181812671 1 0.0647605359554291 experiment 0.65185636374658 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358367 chr15:91358362 synonymous SNV . 0 16 hm5C_associated_SNPs_36407 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:91358339-91358368
64251 chr14 102805195 102805195 1 + G A SKCM 102805183 + 102805163 102805203 41 CATTAGGAATCACAGAATTCCTACGGAAGAAAGAAATACAC CATTAGGAATCACAGAATTCCTACGGAAGAAAAAAATACAC < 41bp 1 0.465941077865751 1 0.650456547737122 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102805183 chr14:102805195 nonsynonymous SNV 0.001 0 33 hm5C_associated_SNPs_36408 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102805175-102805210
64251 chr20 61292522 61292522 1 + G T SKCM 61292526 + 61292506 61292546 41 AAACCATCAGAGACCTGCCTCTGTAAGGACCGGAGTCGGGA AAACCATCAGAGACCTTCCTCTGTAAGGACCGGAGTCGGGA < 41bp 1 0.432289590787765 1 0.284180849790573 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61292526 chr20:61292522 synonymous SNV . 0 17 hm5C_associated_SNPs_36411 0 0 1 PPIG POSTAR2 ENCODE chr20:61292499-61292537
64251 chr1 44134853 44134853 1 + C T SKCM 44134847 + 44134827 44134867 41 AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTG AGGAGGTGAGTCAGAGTGAGCTCTTCTCCAAGGAGGATCTG < 41bp 1 0.315734456280441 1 0.0305983126163483 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134847 chr1:44134853 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_36412 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr1 156105739 156105739 1 + C T SKCM 156105721 + 156105701 156105741 41 AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCG AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCTCG < 41bp 1 0.345599582593483 1 0.384909749031067 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105721 chr1:156105739 synonymous SNV . 0 39 hm5C_associated_SNPs_36413 0 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr1 156105739 156105739 1 + C T SKCM 156105730 + 156105710 156105750 41 AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA AAGCTTCGAGACCTGGAGGACTCACTGGCTCGTGAGCGGGA < 41bp 1 0.251383066043646 1 0.182772874832153 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105730 chr1:156105739 synonymous SNV . 0 30 hm5C_associated_SNPs_36414 0 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr19 50912809 50912809 1 + C T SKCM 50912807 + 50912787 50912827 41 AGCTGGCCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTG AGCTGGCCAAGGAGACAGACCCTCTCCGGCGCCAGGTCCTG < 41bp 1 0.0670407826903939 1 0.0188964009284973 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912807 chr19:50912809 synonymous SNV . 0 23 hm5C_associated_SNPs_36415 0 0 8 BUD13 POSTAR2 ENCODE chr19:50912773-50912812
64251 chr19 50912809 50912809 1 + C T SKCM 50912813 + 50912793 50912833 41 CCAAGGAGACAGACCCCCTCCGGCGCCAGGTCCTGGATGGA CCAAGGAGACAGACCCTCTCCGGCGCCAGGTCCTGGATGGA < 41bp 1 0.536885569047588 1 0.774699687957764 experiment 0.926228861904824 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912813 chr19:50912809 synonymous SNV . 0 17 hm5C_associated_SNPs_36416 0 0 8 BUD13 POSTAR2 ENCODE chr19:50912773-50912812
64251 chrX 151869816 151869816 1 + T G SKCM 151869802 + 151869782 151869822 41 TTGCAGCTGGTCTTTGGCATCGAGCTGATGGAAGTGGACCC TTGCAGCTGGTCTTTGGCATCGAGCTGATGGAAGGGGACCC < 41bp 1 0.623963851628828 1 0.740501821041107 experiment 0.752072296742343 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869802 chrX:151869816 nonsynonymous SNV 0.046 1 35 hm5C_associated_SNPs_36417 0 0 2 LIN28B POSTAR2 ENCODE chrX:151869778-151869824
64251 chr2 99156090 99156090 1 + A T SKCM 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTCTCCCTGCTCGTGCCCCGGCAGT < 41bp 1 0.398479496533737 1 0.229125767946243 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156090 nonsynonymous SNV 0.996 1 27 hm5C_associated_SNPs_36418 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr2 99156091 99156091 1 + C T SKCM 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTCTCCCTGCATGTGCCCCGGCAGT < 41bp 1 0.336816737217637 1 0.75275182723999 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156091 synonymous SNV . 0 28 hm5C_associated_SNPs_36420 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr3 47882497 47882497 1 + G A SKCM 47882499 + 47882479 47882519 41 TGCCCCCTACTTCCTGGCGGCAGCTGAATCCAGAGAGTATT TGCCCCCTACTTCCTGGCAGCAGCTGAATCCAGAGAGTATT < 41bp 1 0.32054507379198 1 0.0912767648696899 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47882499 chr3:47882497 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_36423 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:47882469-47882497
64251 chr7 39730142 39730142 1 + T G SKCM 39730145 + 39730125 39730165 41 GAGGGGTTCCTCTGTGTTTTCTCTATTACAGAAATGGAATC GAGGGGTTCCTCTGTGTGTTCTCTATTACAGAAATGGAATC < 41bp 1 0.773452128223105 1 0.884903192520142 experiment 0.453095743553791 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RALA ENSG00000006451 CDS Human protein_coding chr7:39730145 chr7:39730142 synonymous SNV . 0 18 hm5C_associated_SNPs_36424 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr7:39730110-39730143
64251 chr19 16339733 16339733 1 + C T SKCM 16339738 + 16339718 16339758 41 GTGGTCCATCAAGTCCTTCCCGGTGAGCACTCTGTCCAGAC GTGGTCCATCAAGTCTTTCCCGGTGAGCACTCTGTCCAGAC < 41bp 1 0.583987611506527 1 0.464800357818604 experiment 0.832024776986945 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16339738 chr19:16339733 synonymous SNV . 0 16 hm5C_associated_SNPs_36425 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:16339726-16339764
64251 chr8 56864640 56864640 1 + T A SKCM 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGGCTATTACATCTCTCCACGAATCACTTTACCCT < 41bp 1 0.743200843903987 1 0.907264232635498 experiment 0.513598312192026 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864640 nonsynonymous SNV 0.996 4 37 hm5C_associated_SNPs_36426 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr5 112868665 112868665 1 + T G SKCM 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCGGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA < 41bp 1 0.545192790611264 1 0.111478805541992 experiment 0.909614418777472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868665 synonymous SNV . 0 4 hm5C_associated_SNPs_36427 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868665 112868665 1 + T G SKCM 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCGGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT < 41bp 1 0.582540175118331 1 0.744464099407196 experiment 0.834919649763338 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868665 synonymous SNV . 0 3 hm5C_associated_SNPs_36428 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr17 65905795 65905795 1 + T G SKCM 65905785 + 65905765 65905805 41 AATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG AATAAAAATAGAGCCTGATTCTGAAAAAGAGGAGGTAAAAG < 41bp 1 0.46827683531106 1 0.664343357086182 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65905785 chr17:65905795 nonsynonymous SNV 0.954 0 31 hm5C_associated_SNPs_36429 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65905771-65905807
64251 chr12 131488809 131488809 1 + T C SKCM 131488791 + 131488771 131488811 41 CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCC CTCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCACCC < 41bp 1 0.0550711872835611 1 0.0649777948856354 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488791 chr12:131488809 nonsynonymous SNV 0.050 3 39 hm5C_associated_SNPs_36431 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488809 131488809 1 + T C SKCM 131488792 + 131488772 131488812 41 TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCA TCCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCACCCA < 41bp 1 0.246506357161357 1 0.334141671657562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488792 chr12:131488809 nonsynonymous SNV 0.050 3 38 hm5C_associated_SNPs_36432 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488809 131488809 1 + T C SKCM 131488793 + 131488773 131488813 41 CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAG CCCATTACCGCTTCCCGGCCCACGGGCAGAGCTTCACCCAG < 41bp 1 0.716657163121534 1 0.732958614826202 experiment 0.566685673756931 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488793 chr12:131488809 nonsynonymous SNV 0.050 3 37 hm5C_associated_SNPs_36433 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488809 131488809 1 + T C SKCM 131488795 + 131488775 131488815 41 CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGAT CATTACCGCTTCCCGGCCCACGGGCAGAGCTTCACCCAGAT < 41bp 1 0.53721476250978 1 0.919541358947754 experiment 0.925570474980439 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488795 chr12:131488809 nonsynonymous SNV 0.050 3 35 hm5C_associated_SNPs_36434 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr12 131488809 131488809 1 + T C SKCM 131488799 + 131488779 131488819 41 ACCGCTTCCCGGCCCACGGGCAGAGCTTCATCCAGATCCCC ACCGCTTCCCGGCCCACGGGCAGAGCTTCACCCAGATCCCC < 41bp 1 0.388536638148528 1 0.795200526714325 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRD1 ENSG00000111452 CDS Human protein_coding chr12:131488799 chr12:131488809 nonsynonymous SNV 0.050 3 31 hm5C_associated_SNPs_36435 0 0 1 DDX24 POSTAR2 ENCODE chr12:131488739-131488829
64251 chr10 70968472 70968472 1 + A G SKCM 70968483 + 70968463 70968503 41 AAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGGGCTTT AAATGTCTGGGACGCATAAGCTGTTGAATTTGGAGGGCTTT < 41bp 1 0.426784264708485 1 0.201606124639511 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968483 chr10:70968472 nonsynonymous SNV 0.980 2 10 hm5C_associated_SNPs_36437 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:70968452-70968490
64251 chr5 179025792 179025792 1 + G A SKCM 179025776 + 179025756 179025796 41 ACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATGGAGC ACAGCACGAGAAAGACACTTCCTCTCTACTCAGGATAGAGC < 41bp 1 0.039709915064277 1 0.0746619999408722 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179025776 chr5:179025792 nonsynonymous SNV 0.000 1 37 hm5C_associated_SNPs_36438 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:179025780-179025800
64251 chr17 7417414 7417414 1 + C T SKCM 7417430 + 7417410 7417450 41 ACTTCCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTCT ACTTTCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTCT < 41bp 1 0.570233457098079 1 0.317122578620911 experiment 0.859533085803841 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7417430 chr17:7417414 nonsynonymous SNV 0.998 0 5 hm5C_associated_SNPs_36440 0 0 39 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7417393-7417419
64251 chr17 7417412 7417412 1 + T C SKCM 7417430 + 7417410 7417450 41 ACTTCCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTCT ACCTCCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTCT < 41bp 1 0.54508801249245 1 0.275755852460861 experiment 0.9098239750151 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7417430 chr17:7417412 synonymous SNV 0.995 0 3 hm5C_associated_SNPs_36441 0 0 38 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7417393-7417419
64251 chr15 40708539 40708539 1 + C A SKCM 40708548 + 40708528 40708568 41 ACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTGAGTG ACACAGGTAGCACTGGACGGCATTCAGTGTTTTGGTGAGTG < 41bp 1 0.0388870315828398 1 0.030078649520874 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IVD ENSG00000128928 CDS Human protein_coding chr15:40708548 chr15:40708539 synonymous SNV . 0 12 hm5C_associated_SNPs_36442 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40708509-40708541
64251 chr10 17271935 17271935 1 + G A SKCM 17271952 + 17271932 17271972 41 GTCGAGGTGGAGCGCGACAACCTGGCCGAGGACATCATGCG GTCAAGGTGGAGCGCGACAACCTGGCCGAGGACATCATGCG < 41bp 1 0.418218691791774 1 0.27867004275322 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271952 chr10:17271935 nonsynonymous SNV 0.997 5 4 hm5C_associated_SNPs_36443 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17271926-17271955
64251 chr17 78321333 78321333 1 + G A SKCM 78321325 + 78321305 78321345 41 AGACATTCTTCGAGGGGGACCAGCAGCCGGAGATTATTTTT AGACATTCTTCGAGGGGGACCAGCAGCCAGAGATTATTTTT < 41bp 1 0.163210544342117 1 0.638591766357422 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321325 chr17:78321333 synonymous SNV . 0 29 hm5C_associated_SNPs_36444 0 0 4 FMR1 POSTAR2 ENCODE chr17:78321283-78321353
64251 chr17 78321333 78321333 1 + G A SKCM 78321328 + 78321308 78321348 41 CATTCTTCGAGGGGGACCAGCAGCCGGAGATTATTTTTGGT CATTCTTCGAGGGGGACCAGCAGCCAGAGATTATTTTTGGT < 41bp 1 0.0693302595304327 1 0.441235840320587 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321328 chr17:78321333 synonymous SNV . 0 26 hm5C_associated_SNPs_36445 0 0 4 FMR1 POSTAR2 ENCODE chr17:78321283-78321353
64251 chr6 36566699 36566699 1 + C T SKCM 36566703 + 36566683 36566723 41 AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG AAATCGTGGCCCACCTTCCTCTTGGGGTCGTCGCCCTCGAG < 41bp 1 0.788702467746281 1 0.398265331983566 experiment 0.422595064507437 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566703 chr6:36566699 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_36448 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:36566620-36566740
64251 chr17 78201712 78201712 1 + C T SKCM 78201694 + 78201674 78201714 41 GATGCGGGACCACGTGCCTCCCGTCCACCCCGAGATGCCCC GATGCGGGACCACGTGCCTCCCGTCCACCCCGAGATGCTCC < 41bp 1 0.0904639342070273 1 0.62809419631958 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201694 chr17:78201712 nonsynonymous SNV 0.657 2 39 hm5C_associated_SNPs_36449 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78201639-78201748
64251 chr14 50789412 50789412 1 + C T SKCM 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATTATGA < 41bp 1 0.0746817983433549 1 0.117917776107788 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789412 synonymous SNV . 0 37 hm5C_associated_SNPs_36452 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr20 47859199 47859199 1 + C T SKCM 47859198 + 47859178 47859218 41 ACCAACACAAGCAAGAAGGCCCTGAAACAGTATCGAGCTGG ACCAACACAAGCAAGAAGGCCTTGAAACAGTATCGAGCTGG < 41bp 1 0.428224186872008 1 0.250437259674072 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX27 ENSG00000124228 CDS Human protein_coding chr20:47859198 chr20:47859199 synonymous SNV . 0 22 hm5C_associated_SNPs_36454 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:47859142-47859199
64251 chr3 183435492 183435492 1 + C T SKCM 183435490 + 183435470 183435510 41 TATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG TATTATCAAAGAACAGTTTGCTTTTGAAATGAAGAATAAGG < 41bp 1 0.0179079673728852 1 0.0352792739868164 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183435490 chr3:183435492 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_36456 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183435441-183435528
64251 chr11 308250 308250 1 + G A SKCM 308239 + 308219 308259 41 TCCTGTCAACAGCGGCCAGCCTCCCAACTACGAGATGCTCA TCCTGTCAACAGCGGCCAGCCTCCCAACTACAAGATGCTCA < 41bp 1 0.35077904252841 1 0.326428979635239 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IFITM2 ENSG00000185201 CDS Human protein_coding chr11:308239 chr11:308250 nonsynonymous SNV 0.002 1 32 hm5C_associated_SNPs_36457 0 0 8 LIN28A POSTAR2 GSE39873,GSM980594 chr11:308240-308260
64251 chr16 70162997 70162997 1 + T A SKCM 70163015 + 70162995 70163035 41 CTTGCCCTGGCAAGTGCTGCCTCCCAAAATGGTGAGCAGGT CTAGCCCTGGCAAGTGCTGCCTCCCAAAATGGTGAGCAGGT < 41bp 1 0.155241243306196 1 0.187673300504684 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDPR ENSG00000090857 CDS Human protein_coding chr16:70163015 chr16:70162997 synonymous SNV . 0 3 hm5C_associated_SNPs_36459 0 0 1 DDX24 POSTAR2 ENCODE chr16:70162906-70162999
64251 chr11 73941314 73941314 1 + C T SKCM 73941327 + 73941307 73941347 41 TTGAAGCCATGTATGGGGACCTTCCTCCTCCAATTATGCTG TTGAAGCTATGTATGGGGACCTTCCTCCTCCAATTATGCTG < 41bp 1 0.0782922389896137 1 0.0289098918437958 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PPME1 ENSG00000214517 CDS Human protein_coding chr11:73941327 chr11:73941314 synonymous SNV . 0 8 hm5C_associated_SNPs_36460 0 0 6 DDX24 POSTAR2 ENCODE chr11:73941309-73941410
64251 chr15 52356226 52356226 1 + C T SKCM 52356223 + 52356203 52356243 41 AAGAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGA AAGAAGAAGTACAAGTTGATCCCTGAAAATATTTGGATGGA < 41bp 1 0.286946013943279 1 0.256541728973389 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356223 chr15:52356226 stopgain 1.000 1 24 hm5C_associated_SNPs_36461 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr15 52356226 52356226 1 + C T SKCM 52356225 + 52356205 52356245 41 GAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGA GAAGAAGTACAAGTTGATCCCTGAAAATATTTGGATGGAGA < 41bp 1 0.716071400782735 1 0.445702105760574 experiment 0.567857198434531 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356225 chr15:52356226 stopgain 1.000 1 22 hm5C_associated_SNPs_36462 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr11 130013326 130013326 1 + G A SKCM 130013308 + 130013288 130013328 41 AGAACCATGGCTATGAGAACCCCACCTACAAATACCTGGAG AGAACCATGGCTATGAGAACCCCACCTACAAATACCTGAAG < 41bp 1 0.127162578656961 1 0.3646599650383 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130013308 chr11:130013326 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_36463 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:130013262-130013326
64251 chr15 73023728 73023728 1 + C T SKCM 73023743 + 73023723 73023763 41 TTGTGCTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTG TTGTGTTGTTCCAGAAAGTCCTCCACTCTGGAATAACATTG < 41bp 1 0.749881155934019 1 0.765636265277863 experiment 0.500237688131963 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout BBS4 ENSG00000140463 CDS Human protein_coding chr15:73023743 chr15:73023728 nonsynonymous SNV 0.949 0 6 hm5C_associated_SNPs_36464 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:73023709-73023736
64251 chr7 44685012 44685012 1 + C T SKCM 44685003 + 44684983 44685023 41 CAGAGTCCCCTTCCCCTGAGCCGAGGCTCCCTGGCTGCTGT CAGAGTCCCCTTCCCCTGAGCCGAGGCTCTCTGGCTGCTGT < 41bp 1 0.246578295851858 1 0.472901254892349 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44685003 chr7:44685012 synonymous SNV . 0 30 hm5C_associated_SNPs_36466 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44684987-44685021
64251 chr5 139889228 139889228 1 + C G SKCM 139889232 + 139889212 139889252 41 GTTTAAACAGACGGGTCTTACCCCCTTGATGGAAGCAGCTT GTTTAAACAGACGGGTGTTACCCCCTTGATGGAAGCAGCTT < 41bp 1 0.159230357018597 1 0.062961608171463 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889232 chr5:139889228 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_36467 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139889221-139889242
64251 chr5 139889228 139889228 1 + C G SKCM 139889233 + 139889213 139889253 41 TTTAAACAGACGGGTCTTACCCCCTTGATGGAAGCAGCTTC TTTAAACAGACGGGTGTTACCCCCTTGATGGAAGCAGCTTC < 41bp 1 0.28489768280222 1 0.0457251369953156 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889233 chr5:139889228 nonsynonymous SNV 0.998 4 16 hm5C_associated_SNPs_36468 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139889221-139889242
64251 chr5 139889228 139889228 1 + C G SKCM 139889234 + 139889214 139889254 41 TTAAACAGACGGGTCTTACCCCCTTGATGGAAGCAGCTTCT TTAAACAGACGGGTGTTACCCCCTTGATGGAAGCAGCTTCT < 41bp 1 0.100126976432147 1 0.107112437486649 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889234 chr5:139889228 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_36469 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139889221-139889242
64251 chr5 139889228 139889228 1 + C G SKCM 139889236 + 139889216 139889256 41 AAACAGACGGGTCTTACCCCCTTGATGGAAGCAGCTTCTGG AAACAGACGGGTGTTACCCCCTTGATGGAAGCAGCTTCTGG < 41bp 1 0.399991163557126 1 0.450942426919937 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139889236 chr5:139889228 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_36470 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139889221-139889242
64251 chr16 30740292 30740292 1 + C T SKCM 30740289 + 30740269 30740309 41 TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAAAGCGGAA TTTTTCTCTCACCCCCAGGACTCTCTGGAGGAAAAGCGGAA < 41bp 1 0.0248280013904888 1 0.0773354470729828 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30740289 chr16:30740292 synonymous SNV . 0 24 hm5C_associated_SNPs_36471 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr16:30740280-30740300
64251 chr15 52356225 52356225 1 + C T SKCM 52356223 + 52356203 52356243 41 AAGAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGA AAGAAGAAGTACAAGTTGATCCTCGAAAATATTTGGATGGA < 41bp 1 0.237248279181434 1 0.421688616275787 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356223 chr15:52356225 synonymous SNV . 0 23 hm5C_associated_SNPs_36472 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr15 52356225 52356225 1 + C T SKCM 52356226 + 52356206 52356246 41 AAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGAT AAGAAGTACAAGTTGATCCTCGAAAATATTTGGATGGAGAT < 41bp 1 0.634780419649353 1 0.443077594041824 experiment 0.730439160701294 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356226 chr15:52356225 synonymous SNV . 0 20 hm5C_associated_SNPs_36473 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr16 30740291 30740291 1 + C T SKCM 30740289 + 30740269 30740309 41 TTTTTCTCTCACCCCCAGGACTCCCTGGAGGAAAAGCGGAA TTTTTCTCTCACCCCCAGGACTTCCTGGAGGAAAAGCGGAA < 41bp 1 0.0191562675017389 1 0.0670580863952637 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30740289 chr16:30740291 nonsynonymous SNV 0.956 2 23 hm5C_associated_SNPs_36474 0 0 16 SRSF1 POSTAR2 GSE83923,GSM2221663 chr16:30740280-30740300
64251 chr7 99159542 99159542 1 + C T SKCM 99159535 + 99159515 99159555 41 ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC ACCTGTTCCTCAGGTGCCTGCTCTTCCTCGTGAGGGAAGCC < 41bp 1 0.189378775734255 1 0.0975724458694458 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF655 ENSG00000197343 CDS Human protein_coding chr7:99159535 chr7:99159542 synonymous SNV . 0 28 hm5C_associated_SNPs_36476 0 0 4 SF3A3 POSTAR2 ENCODE chr7:99159432-99159544
64251 chr11 65273128 65273128 1 + T G SKCM 65273147 + 65273127 65273167 41 TTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAA TGTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAA < 41bp 1 0.790528191271487 1 0.934291005134583 experiment 0.418943617457026 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273147 chr11:65273128 . . 0 2 hm5C_associated_SNPs_36477 0 0 91 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65272880-65273140
64251 chr22 41735146 41735146 1 + C T SKCM 41735129 + 41735109 41735149 41 AGGACCCTCCCCAGCACCGACAGCCTGGATGACTTCTCAGA AGGACCCTCCCCAGCACCGACAGCCTGGATGACTTCTTAGA < 41bp 1 0.207146828541122 1 0.220252305269241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41735129 chr22:41735146 nonsynonymous SNV 0.987 0 38 hm5C_associated_SNPs_36478 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41735126-41735183
64251 chr1 233514947 233514947 1 + C T SKCM 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTGGCATTGGTGGCTCTGGGACTGG < 41bp 1 0.141936474335939 1 0.0372277796268463 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514947 nonsynonymous SNV 0.018 4 24 hm5C_associated_SNPs_36479 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr17 21731336 21731336 1 + C T SKCM 21731317 + 21731297 21731337 41 GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAACATTC < 41bp 1 0.153743570717173 1 0.114688277244568 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731317 chr17:21731336 nonsynonymous SNV 0.952 0 40 hm5C_associated_SNPs_36480 0 0 2 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr2 171822317 171822317 1 + T C SKCM 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTCCCATGCCT < 41bp 1 0.12973163091262 1 0.0545580387115479 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822317 nonsynonymous SNV 0.952 0 33 hm5C_associated_SNPs_36481 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr2 171822316 171822316 1 + T C SKCM 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCCTCCATGCCT < 41bp 1 0.118657389400599 1 0.0574448704719543 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822316 synonymous SNV . 0 32 hm5C_associated_SNPs_36482 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr2 113243522 113243522 1 + G T SKCM 113243539 + 113243519 113243559 41 GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG GGTTAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG < 41bp 1 0.236716745935331 1 0.166582256555557 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113243539 chr2:113243522 synonymous SNV . 0 4 hm5C_associated_SNPs_36483 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:113243498-113243536
64251 chr6 31601235 31601235 1 + C T SKCM 31601218 + 31601198 31601238 41 CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACCAAG CCCACCTCCCAGCAGTTCTGCTGTCTTCCGCCTGGACTAAG < 41bp 1 0.295704661126136 1 0.13575553894043 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31601218 chr6:31601235 stopgain 1.000 0 38 hm5C_associated_SNPs_36484 0 0 25 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31601183-31601237
64251 chr3 155629027 155629027 1 + C T SKCM 155629040 + 155629020 155629060 41 AGCCAGTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA AGCCAGTTTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA < 41bp 1 0.135735319195187 1 0.0410372316837311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155629040 chr3:155629027 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_36485 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155629005-155629070
64251 chr3 184042702 184042702 1 + G A SKCM 184042684 + 184042664 184042704 41 AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAAAG < 41bp 1 0.774631572412855 1 0.581802427768707 experiment 0.450736855174289 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042684 chr3:184042702 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_36497 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr17 4797353 4797353 1 + C T SKCM 4797354 + 4797334 4797374 41 GGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCA GGAGATCACCGGGACCCAGTCCCCATACGGGGGCGGCACCA < 41bp 1 0.590274826542014 1 0.847155570983887 experiment 0.819450346915971 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797354 chr17:4797353 nonsynonymous SNV 0.958 0 20 hm5C_associated_SNPs_36498 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797353 4797353 1 + C T SKCM 4797355 + 4797335 4797375 41 GAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCAT GAGATCACCGGGACCCAGTCCCCATACGGGGGCGGCACCAT < 41bp 1 0.0741695341049198 1 0.751321911811829 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797355 chr17:4797353 nonsynonymous SNV 0.958 0 19 hm5C_associated_SNPs_36499 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797353 4797353 1 + C T SKCM 4797356 + 4797336 4797376 41 AGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATG AGATCACCGGGACCCAGTCCCCATACGGGGGCGGCACCATG < 41bp 1 0.138173157790719 1 0.2105892598629 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797356 chr17:4797353 nonsynonymous SNV 0.958 0 18 hm5C_associated_SNPs_36500 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797353 4797353 1 + C T SKCM 4797357 + 4797337 4797377 41 GATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATGG GATCACCGGGACCCAGTCCCCATACGGGGGCGGCACCATGG < 41bp 1 0.171020772213633 1 0.413295984268188 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797357 chr17:4797353 nonsynonymous SNV 0.958 0 17 hm5C_associated_SNPs_36501 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr17 4797353 4797353 1 + C T SKCM 4797367 + 4797347 4797387 41 ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG ACCCAGTCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG < 41bp 1 0.431597919530554 1 0.250224709510803 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797367 chr17:4797353 nonsynonymous SNV 0.958 0 7 hm5C_associated_SNPs_36502 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4797329-4797380
64251 chr1 151006643 151006643 1 + C T SKCM 151006659 + 151006639 151006679 41 GAGGCCGTCTTCGAGAAGTGCAGTCAGATCTCACTGTCACA GAGGTCGTCTTCGAGAAGTGCAGTCAGATCTCACTGTCACA < 41bp 1 0.0986524049538297 1 0.120564043521881 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006659 chr1:151006643 nonsynonymous SNV 0.078 0 5 hm5C_associated_SNPs_36503 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006623-151006651
64251 chr2 171822318 171822318 1 + C T SKCM 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTTCATGCCT < 41bp 1 0.126908342396143 1 0.186436146497726 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822318 nonsynonymous SNV 0.964 1 34 hm5C_associated_SNPs_36505 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr22 41924005 41924005 1 + G A SKCM 41924003 + 41923983 41924023 41 ACAAGCTGACCATTCAGGGCCTGAAGGACTTCACCCCTGGC ACAAGCTGACCATTCAGGGCCTAAAGGACTTCACCCCTGGC < 41bp 1 0.408190871653529 1 0.273971557617188 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924003 chr22:41924005 synonymous SNV . 0 23 hm5C_associated_SNPs_36506 0 0 8 DDX24 POSTAR2 ENCODE chr22:41923953-41924011
64251 chr12 110457005 110457005 1 + C T SKCM 110457008 + 110456988 110457028 41 GTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCG GTCACCACCGAACGCTTTGACCTTTCCCAAGAAATGGAGCG < 41bp 1 0.0224049450839576 1 0.0860740542411804 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110457008 chr12:110457005 synonymous SNV . 0 18 hm5C_associated_SNPs_36507 0 0 2 BUD13 POSTAR2 ENCODE chr12:110457004-110457066
64251 chr10 24817000 24817000 1 + G A SKCM 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAAATCTGGAGATGCCGCCAGCCACAAGCCCACTG < 41bp 1 0.143944478989609 1 0.0984247922897339 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24817000 nonsynonymous SNV 0.002 0 33 hm5C_associated_SNPs_36508 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24817000 24817000 1 + G A SKCM 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATCTGGAGATGCCGCCAGCCACAAGCCCACTGCCAA < 41bp 1 0.222668428659934 1 0.685711979866028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24817000 nonsynonymous SNV 0.002 0 29 hm5C_associated_SNPs_36509 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr19 48833692 48833692 1 + G A SKCM 48833674 + 48833654 48833694 41 CCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGC CCCTGGCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCAGC < 41bp 1 0.468256888644021 1 0.222208946943283 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833674 chr19:48833692 nonsynonymous SNV 0.991 2 39 hm5C_associated_SNPs_36510 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr19 48833692 48833692 1 + G A SKCM 48833679 + 48833659 48833699 41 GCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCGGCATCAT GCCTGGGTGGCCTTCCCCCTCGCCCTGGTCAGCAGCATCAT < 41bp 1 0.707200150127996 1 0.308564722537994 experiment 0.585599699744009 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833679 chr19:48833692 nonsynonymous SNV 0.991 2 34 hm5C_associated_SNPs_36511 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48833668-48833713
64251 chr17 66039321 66039321 1 + C T SKCM 66039310 + 66039290 66039330 41 TGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGC TGCTGTTGAGCAGATTCTTCCTACCTTAGTTTGGCTCCTGC < 41bp 1 0.410011685239144 1 0.364116013050079 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039310 chr17:66039321 nonsynonymous SNV 0.939 0 32 hm5C_associated_SNPs_36512 0 0 37 FMR1 POSTAR2 GSE39682,GSM977615 chr17:66039220-66039333
64251 chr10 12162807 12162807 1 + C T SKCM 12162801 + 12162781 12162821 41 TATAGCTCCGTCTGGTGGGCCGGCCCCCTTTGCCAGTACCC TATAGCTCCGTCTGGTGGGCCGGCCCTCTTTGCCAGTACCC < 41bp 1 0.197946506081859 1 0.650230348110199 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12162801 chr10:12162807 nonsynonymous SNV 0.982 0 27 hm5C_associated_SNPs_36513 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:12162792-12162807
64251 chrX 73046482 73046482 1 - C T SKCM 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACCTGGGGAAATCCCAAGATAAGAACCCTAAAC < 41bp 1 0.597248496032239 1 0.748787760734558 experiment 0.805503007935522 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046482 . . 0 29 hm5C_associated_SNPs_36514 0 0 84 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr17 42636670 42636670 1 + G C SKCM 42636652 + 42636632 42636672 41 CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTCTGGAT CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTCTGCAT < 41bp 1 0.294192515178567 1 0.0460450947284698 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636652 chr17:42636670 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_36527 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42636646-42636684
64251 chr11 65561697 65561697 1 + G A SKCM 65561686 + 65561666 65561706 41 CACTTGACAGACCCCCAGAGCAGAGACCATGGCTTCCTGCG CACTTGACAGACCCCCAGAGCAGAGACCATGACTTCCTGCG < 41bp 1 0.436249031117089 1 0.733706831932068 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OVOL1 ENSG00000172818 CDS Human protein_coding chr11:65561686 chr11:65561697 nonsynonymous SNV 0.997 0 32 hm5C_associated_SNPs_36533 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr11:65561680-65561700
64251 chr19 1360337 1360337 1 + C T SKCM 1360355 + 1360335 1360375 41 CCCCGCGGAGACGTGTTGGGCAGTTCCAGACCTCACAGGAG CCTCGCGGAGACGTGTTGGGCAGTTCCAGACCTCACAGGAG < 41bp 1 0.291349065505611 1 0.35987663269043 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MUM1 ENSG00000160953 CDS Human protein_coding chr19:1360355 chr19:1360337 synonymous SNV . 0 3 hm5C_associated_SNPs_36534 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1360307-1360338
64251 chr7 36492118 36492118 1 + G C SKCM 36492117 + 36492097 36492137 41 CTGCAGATACTAAAGAAGAGCGGGATCTCTGGATGCAAAAA CTGCAGATACTAAAGAAGAGCCGGATCTCTGGATGCAAAAA < 41bp 1 0.465180339226284 1 0.266380310058594 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36492117 chr7:36492118 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_36535 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:36492087-36492123
64251 chr10 51863872 51863872 1 + T C SKCM 51863880 + 51863860 51863900 41 AGCTCCCCACGTTGGTTTCCCTGTTTGATGATGAAGATGAA AGCTCCCCACGTCGGTTTCCCTGTTTGATGATGAAGATGAA < 41bp 1 0.133951376084225 1 0.134731590747833 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASHC2A ENSG00000099290 CDS Human protein_coding chr10:51863880 chr10:51863872 nonsynonymous SNV 0.002 0 13 hm5C_associated_SNPs_36537 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:51863828-51863886
64251 chr17 55194237 55194237 1 + C A SKCM 55194240 + 55194220 55194260 41 GGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTC GGTCTGACTTTGTCACCATGCCGTTTCAGGGAGCAGAAGTC < 41bp 1 0.080167237333456 1 0.217909842729568 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194240 chr17:55194237 nonsynonymous SNV 0.997 4 18 hm5C_associated_SNPs_36538 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194237 55194237 1 + C A SKCM 55194241 + 55194221 55194261 41 GTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCC GTCTGACTTTGTCACCATGCCGTTTCAGGGAGCAGAAGTCC < 41bp 1 0.0563604776175547 1 0.0478800535202026 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194241 chr17:55194237 nonsynonymous SNV 0.997 4 17 hm5C_associated_SNPs_36539 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr17 55194237 55194237 1 + C A SKCM 55194253 + 55194233 55194273 41 CACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTG CACCATGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTG < 41bp 1 0.532145928092293 1 0.484088659286499 experiment 0.935708143815414 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55194253 chr17:55194237 nonsynonymous SNV 0.997 4 5 hm5C_associated_SNPs_36540 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55194229-55194271
64251 chr11 117280347 117280347 1 + G T SKCM 117280351 + 117280331 117280371 41 CAGTCGACTCAACCCCGAGTCTCACCTCCCGCAAGATCCAC CAGTCGACTCAACCCCTAGTCTCACCTCCCGCAAGATCCAC < 41bp 1 0.191364688620508 1 0.0474931299686432 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP164 ENSG00000110274 CDS Human protein_coding chr11:117280351 chr11:117280347 synonymous SNV . 0 17 hm5C_associated_SNPs_36541 0 0 1 SF3A3 POSTAR2 ENCODE chr11:117280301-117280354
64251 chr1 46827401 46827401 1 + G C SKCM 46827413 + 46827393 46827433 41 TTCCGAAGGGTTTTCATGGACACATTTTGTTTCTTCTCATC TTCCGAAGCGTTTTCATGGACACATTTTGTTTCTTCTCATC < 41bp 1 0.350318182283029 1 0.0614575445652008 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46827413 chr1:46827401 nonsynonymous SNV 0.997 0 9 hm5C_associated_SNPs_36542 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46827384-46827453
64251 chr15 91492571 91492571 1 + G A SKCM 91492589 + 91492569 91492609 41 TCGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCA TCAGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCA < 41bp 1 0.774214043417505 1 0.818335890769958 experiment 0.451571913164991 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492589 chr15:91492571 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_36543 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr15:91492554-91492575
64251 chr12 2906442 2906442 1 + G C SKCM 2906431 + 2906411 2906451 41 GGATCGCAAGGACAAATTCTCCTTTGACCTGGGAAAAGGTA GGATCGCAAGGACAAATTCTCCTTTGACCTGCGAAAAGGTA < 41bp 1 0.0404446416153519 1 0.0297217667102814 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2906431 chr12:2906442 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_36545 0 0 2 FMR1 POSTAR2 ENCODE chr12:2906401-2906449
64251 chr7 134215404 134215404 1 + G T SKCM 134215396 + 134215376 134215416 41 CTTTTCTTTTGCCTTTCAGTCTCCTCTTGGCAAAGTGAAAG CTTTTCTTTTGCCTTTCAGTCTCCTCTTTGCAAAGTGAAAG < 41bp 1 0.232933679188929 1 0.272315561771393 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134215396 chr7:134215404 nonsynonymous SNV 0.023 3 29 hm5C_associated_SNPs_36546 0 0 1 RPS3 POSTAR2 ENCODE chr7:134215403-134215440
64251 chr20 37154673 37154673 1 + C A SKCM 37154672 + 37154652 37154692 41 GAAACGGACCCCAACAACACCCAAATGATATTAGGTTTGTA GAAACGGACCCCAACAACACCAAAATGATATTAGGTTTGTA < 41bp 1 0.207900311673923 1 0.443513035774231 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37154672 chr20:37154673 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_36547 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:37154599-37154673
64251 chr1 228879182 228879182 1 + C T SKCM 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATCTTAGTTGGAACGCAGTC < 41bp 1 0.14798939569842 1 0.121159911155701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879182 synonymous SNV . 0 25 hm5C_associated_SNPs_36548 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:228879159-228879185
64251 chr21 34635141 34635141 1 + C G SKCM 34635140 + 34635120 34635160 41 GGCCATTTCCTAACCTGCCACCGTTGGAAGCCATGGATATG GGCCATTTCCTAACCTGCCACGGTTGGAAGCCATGGATATG < 41bp 1 0.107896090190869 1 0.060190349817276 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635140 chr21:34635141 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_36549 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:34635130-34635150
64251 chr20 37159863 37159863 1 + C G SKCM 37159852 + 37159832 37159872 41 AGATTCAGCACTTTTGGAAGCCATTGGTTGCCAGATGGAGA AGATTCAGCACTTTTGGAAGCCATTGGTTGCGAGATGGAGA < 41bp 1 0.0203154217039444 1 0.102235436439514 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37159852 chr20:37159863 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_36550 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:37159840-37159870
64251 chr10 51863866 51863866 1 + C G SKCM 51863880 + 51863860 51863900 41 AGCTCCCCACGTTGGTTTCCCTGTTTGATGATGAAGATGAA AGCTCCGCACGTTGGTTTCCCTGTTTGATGATGAAGATGAA < 41bp 1 0.141366576963284 1 0.106025338172913 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASHC2A ENSG00000099290 CDS Human protein_coding chr10:51863880 chr10:51863866 nonsynonymous SNV 0.008 0 7 hm5C_associated_SNPs_36551 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:51863828-51863886
64251 chrX 73046538 73046538 1 - G T SKCM 73046526 - 73046506 73046546 41 TGGAGGCCCATGACCCAGAACCCAGGAAGGATAGAAGCTTG TGGAGGCCAATGACCCAGAACCCAGGAAGGATAGAAGCTTG < 41bp 1 0.186254145131624 1 0.27326512336731 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046526 chrX:73046538 . . 0 9 hm5C_associated_SNPs_36552 0 0 67 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046538 73046538 1 - G T SKCM 73046532 - 73046512 73046552 41 GGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAGA GGAATCTGGAGGCCAATGACCCAGAACCCAGGAAGGATAGA < 41bp 1 0.296232177179573 1 0.399207472801208 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046532 chrX:73046538 . . 0 15 hm5C_associated_SNPs_36553 0 0 67 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046538 73046538 1 - G T SKCM 73046533 - 73046513 73046553 41 CGGAATCTGGAGGCCCATGACCCAGAACCCAGGAAGGATAG CGGAATCTGGAGGCCAATGACCCAGAACCCAGGAAGGATAG < 41bp 1 0.281323794541134 1 0.321939051151276 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046533 chrX:73046538 . . 0 16 hm5C_associated_SNPs_36554 0 0 67 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046538 73046538 1 - G T SKCM 73046539 - 73046519 73046559 41 AACGGCCGGAATCTGGAGGCCCATGACCCAGAACCCAGGAA AACGGCCGGAATCTGGAGGCCAATGACCCAGAACCCAGGAA < 41bp 1 0.172118364384849 1 0.445540517568588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046539 chrX:73046538 . . 0 22 hm5C_associated_SNPs_36555 0 0 67 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr8 42220189 42220189 1 + C G SKCM 42220194 + 42220174 42220214 41 TTTTATCACAGATACCCTGTCAAAGGGTGAGACAAAGTTCA TTTTATCACAGATACGCTGTCAAAGGGTGAGACAAAGTTCA < 41bp 1 0.495061313630176 1 0.701883614063263 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLB ENSG00000070501 CDS Human protein_coding chr8:42220194 chr8:42220189 synonymous SNV . 0 16 hm5C_associated_SNPs_36556 0 0 4 IGF2BP1 POSTAR2 ENCODE chr8:42220129-42220217
64251 chrX 21995222 21995222 1 + C T SKCM 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGTCCA < 41bp 1 0.141518856760779 1 0.250954389572144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995222 nonsynonymous SNV 0.941 4 38 hm5C_associated_SNPs_36557 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chrX:21995210-21995242
64251 chr19 41758839 41758839 1 + C T SKCM 41758850 + 41758830 41758870 41 ACACAGCTTCCTCCTCTATTCCCGGCTCGGGGACCAGCCAG ACACAGCTTTCTCCTCTATTCCCGGCTCGGGGACCAGCCAG < 41bp 1 0.611617025282362 1 0.301195681095123 experiment 0.776765949435275 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AXL ENSG00000167601 CDS Human protein_coding chr19:41758850 chr19:41758839 synonymous SNV . 0 10 hm5C_associated_SNPs_36558 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr19:41758818-41758839
64251 chr19 41758839 41758839 1 + C T SKCM 41758851 + 41758831 41758871 41 CACAGCTTCCTCCTCTATTCCCGGCTCGGGGACCAGCCAGT CACAGCTTTCTCCTCTATTCCCGGCTCGGGGACCAGCCAGT < 41bp 1 0.195068261021293 1 0.239990919828415 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AXL ENSG00000167601 CDS Human protein_coding chr19:41758851 chr19:41758839 synonymous SNV . 0 9 hm5C_associated_SNPs_36559 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr19:41758818-41758839
64251 chr19 10794134 10794134 1 + C T SKCM 10794136 + 10794116 10794156 41 TGCCCTAGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTG TGCCCTAGAAAAGCTTTTTCCTGACACCCCTCTCGCCCTTG < 41bp 1 0.406524107415439 1 0.178416550159454 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794136 chr19:10794134 synonymous SNV . 0 19 hm5C_associated_SNPs_36560 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr19 10794134 10794134 1 + C T SKCM 10794142 + 10794122 10794162 41 AGAAAAGCTTTTCCCTGACACCCCTCTCGCCCTTGATGCCA AGAAAAGCTTTTTCCTGACACCCCTCTCGCCCTTGATGCCA < 41bp 1 0.189132670153017 1 0.0315176248550415 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794142 chr19:10794134 synonymous SNV . 0 13 hm5C_associated_SNPs_36561 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10794043-10794142
64251 chr2 207174867 207174867 1 + G A SKCM 207174847 + 207174827 207174867 41 TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGG TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGA < 41bp 1 0.456772507921862 1 0.170725733041763 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174847 chr2:207174867 nonsynonymous SNV 0.001 0 41 hm5C_associated_SNPs_36562 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174770-207174869
64251 chr13 42874908 42874908 1 + T G STAD 42874915 + 42874895 42874935 41 TGCATCTCCACAGTGTGGGTCGTTTGACTTTGAAGACAAAG TGCATCTCCACAGGGTGGGTCGTTTGACTTTGAAGACAAAG < 41bp 1 0.0295120083689809 1 0.186014115810394 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42874915 chr13:42874908 nonsynonymous SNV 0.667 0 14 hm5C_associated_SNPs_36564 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:42874879-42874929
64251 chr15 76630254 76630254 1 + C T STAD 76630260 + 76630240 76630280 41 GTACCTGGACGAGACGTGCACGTGCTTCGTGAGAGACGGGA GTACCTGGACGAGATGTGCACGTGCTTCGTGAGAGACGGGA < 41bp 1 0.30850342408602 1 0.393552213907242 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630260 chr15:76630254 nonsynonymous SNV 0.999 5 15 hm5C_associated_SNPs_36565 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630220-76630260
64251 chr9 133355792 133355792 1 + G A STAD 133355811 + 133355791 133355831 41 CGTATTGACATCGTGGAGAACCGCTTCATTGGAATGAAGTC CATATTGACATCGTGGAGAACCGCTTCATTGGAATGAAGTC < 41bp 1 0.111804999385471 1 0.0943539440631866 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ASS1 ENSG00000130707 CDS Human protein_coding chr9:133355811 chr9:133355792 nonsynonymous SNV 0.962 3 2 hm5C_associated_SNPs_36566 1 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:133355780-133355808
64251 chr14 20822321 20822321 1 + G T STAD 20822301 + 20822281 20822321 41 CTCCCTTGAAGCCAGAGTCACAGCTAGATCTTCGGGTACAG CTCCCTTGAAGCCAGAGTCACAGCTAGATCTTCGGGTACAT < 41bp 1 0.406760768269984 1 0.231780916452408 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PARP2 ENSG00000129484 CDS Human protein_coding chr14:20822301 chr14:20822321 nonsynonymous SNV 0.839 3 41 hm5C_associated_SNPs_36567 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20822295-20822324
64251 chr17 80012606 80012606 1 + G A STAD 80012597 + 80012577 80012617 41 ACTACCTGGACTGTGGGGACCTCAGCAACGCCCTCAAGTGC ACTACCTGGACTGTGGGGACCTCAGCAACACCCTCAAGTGC < 41bp 1 0.591446759034854 1 0.245601236820221 experiment 0.817106481930291 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012597 chr17:80012606 nonsynonymous SNV 0.998 5 30 hm5C_associated_SNPs_36569 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:80012589-80012617
64251 chr17 61907726 61907726 1 + G A STAD 61907746 + 61907726 61907766 41 GGTGGAGAAAGTACCAGATTCAACTTATGAGATGATTGGTG AGTGGAGAAAGTACCAGATTCAACTTATGAGATGATTGGTG < 41bp 1 0.417165571098142 1 0.375491410493851 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907746 chr17:61907726 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_36570 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61907641-61907850
64251 chr4 20568977 20568977 1 + T G STAD 20568982 + 20568962 20569002 41 AGTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGG AGTGATCCAGTTGACGTTTACCGATGCACCTGTCCATATGG < 41bp 1 0.121157058187359 1 0.559580445289612 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568982 chr4:20568977 nonsynonymous SNV 0.997 2 16 hm5C_associated_SNPs_36571 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr4 20568977 20568977 1 + T G STAD 20568983 + 20568963 20569003 41 GTGATCCAGTTGACTTTTACCGATGCACCTGTCCATATGGT GTGATCCAGTTGACGTTTACCGATGCACCTGTCCATATGGT < 41bp 1 0.14809053373071 1 0.560909390449524 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20568983 chr4:20568977 nonsynonymous SNV 0.997 2 15 hm5C_associated_SNPs_36572 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20568944-20568994
64251 chr2 32668623 32668623 1 + A G STAD 32668612 + 32668592 32668632 41 TGGACCTGTTCTGTTGAAGGCTTTACTTGATAATATGTCAT TGGACCTGTTCTGTTGAAGGCTTTACTTGATGATATGTCAT < 41bp 1 0.0433821810209544 1 0.107101768255234 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32668612 chr2:32668623 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_36573 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32668566-32668627
64251 chr7 39991418 39991418 1 + G A STAD 39991410 + 39991390 39991430 41 CCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAG CCTAGTCCCTACAGCAGCAGCAGCTGGCACCGCTCTCGCAG < 41bp 1 0.541407111205082 1 0.412324011325836 experiment 0.917185777589837 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991410 chr7:39991418 nonsynonymous SNV 0.938 3 29 hm5C_associated_SNPs_36574 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:39991415-39991439
64251 chr7 39991418 39991418 1 + G A STAD 39991428 + 39991408 39991448 41 AGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCT AGCAGCTGGCACCGCTCTCGCAGTCCCTACAGCCCTGTGCT < 41bp 1 0.20977966047927 1 0.745945274829865 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991428 chr7:39991418 nonsynonymous SNV 0.938 3 11 hm5C_associated_SNPs_36575 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:39991415-39991439
64251 chr7 99725164 99725164 1 + C T STAD 99725178 + 99725158 99725198 41 TCCTACCCCAGACCCGGGGCCCGGCCTCCAGCCACCGAGAG TCCTACTCCAGACCCGGGGCCCGGCCTCCAGCCACCGAGAG < 41bp 1 0.368607630303457 1 0.435442000627518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MBLAC1 ENSG00000214309 CDS Human protein_coding chr7:99725178 chr7:99725164 nonsynonymous SNV 0.027 3 7 hm5C_associated_SNPs_36577 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99725158-99725204
64251 chr22 38470973 38470973 1 + A C STAD 38470992 + 38470972 38471012 41 GAGGTAGACCTGGCGCACACCACATTGGCCTATGGCCTCAA GCGGTAGACCTGGCGCACACCACATTGGCCTATGGCCTCAA < 41bp 1 0.567758727290524 1 0.681569695472717 experiment 0.864482545418952 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PICK1 ENSG00000100151 CDS Human protein_coding chr22:38470992 chr22:38470973 nonsynonymous SNV 0.997 4 2 hm5C_associated_SNPs_36578 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr22:38470960-38470980
64251 chr3 157841666 157841666 1 + G C STAD 157841658 + 157841638 157841678 41 ATTATATTTTATTTCAGACGCAGGCATCGATCAAGCAGTAG ATTATATTTTATTTCAGACGCAGGCATCCATCAAGCAGTAG < 41bp 1 0.337263201986059 1 0.212467461824417 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841658 chr3:157841666 nonsynonymous SNV 0.999 4 29 hm5C_associated_SNPs_36579 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr3 157841666 157841666 1 + G C STAD 157841665 + 157841645 157841685 41 TTTATTTCAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT TTTATTTCAGACGCAGGCATCCATCAAGCAGTAGCTCTTCT < 41bp 1 0.0337983934261383 1 0.0768753886222839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841665 chr3:157841666 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_36580 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr19 18729278 18729278 1 + G A STAD 18729284 + 18729264 18729304 41 ACCCTGGTGACCGCGCCTGGCCAGCACCTCAAGTTCCAGGT ACCCTGGTGACCGCACCTGGCCAGCACCTCAAGTTCCAGGT < 41bp 1 0.222687025657753 1 0.177186816930771 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM59L ENSG00000105696 CDS Human protein_coding chr19:18729284 chr19:18729278 synonymous SNV . 0 15 hm5C_associated_SNPs_36582 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:18729254-18729288
64251 chr4 183601724 183601724 1 + C T STAD 183601733 + 183601713 183601753 41 TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTG TGTAGTGGCAATGGGCAGTACTCCAAGGGCCGCTGCCTGTG < 41bp 1 0.761425496214708 1 0.980068147182465 experiment 0.477149007570583 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183601733 chr4:183601724 synonymous SNV . 0 12 hm5C_associated_SNPs_36583 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:183601709-183601739
64251 chr8 145065717 145065717 1 + T C STAD 145065698 + 145065678 145065718 41 AAGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTC AAGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTCC < 41bp 1 0.183378354931208 1 0.076710432767868 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065698 chr8:145065717 nonsynonymous SNV 0.986 1 40 hm5C_associated_SNPs_36584 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:145065713-145065759
64251 chr8 145065717 145065717 1 + T C STAD 145065699 + 145065679 145065719 41 AGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTTCC AGGGGGCTACCCCCAGGGGCCATATCCCCAGAGCCCCTCCC < 41bp 1 0.186655864532448 1 0.11325865983963 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065699 chr8:145065717 nonsynonymous SNV 0.986 1 39 hm5C_associated_SNPs_36585 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:145065713-145065759
64251 chr20 47582545 47582545 1 + G A STAD 47582558 + 47582538 47582578 41 CCTTGTCGTCAGCAGATAATCTGGTATGTTGGTGATCATCC CCTTGTCATCAGCAGATAATCTGGTATGTTGGTGATCATCC < 41bp 1 0.653798470134631 1 0.0766105353832245 experiment 0.692403059730737 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47582558 chr20:47582545 synonymous SNV . 0 8 hm5C_associated_SNPs_36590 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:47582536-47582550
64251 chr7 2290630 2290630 1 + G A STAD 2290643 + 2290623 2290663 41 TGGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAG TGGACACAGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAG < 41bp 1 0.6372151144522 1 0.380174964666367 experiment 0.7255697710956 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2290643 chr7:2290630 synonymous SNV . 0 8 hm5C_associated_SNPs_36591 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr7 2290630 2290630 1 + G A STAD 2290644 + 2290624 2290664 41 GGACACGGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGG GGACACAGTCTAGCGGGAGCCCAGGGCAGCCCCTGGGCAGG < 41bp 1 0.782776482180762 1 0.820693612098694 experiment 0.434447035638476 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUDT1 ENSG00000106268 CDS Human protein_coding chr7:2290644 chr7:2290630 synonymous SNV . 0 7 hm5C_associated_SNPs_36592 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2290621-2290674
64251 chr11 93494790 93494790 1 + T C STAD 93494810 + 93494790 93494830 41 TACCTGCAGAGTTTCTCTATCGCATTGATCAACCAAAAGAG CACCTGCAGAGTTTCTCTATCGCATTGATCAACCAAAAGAG < 41bp 1 0.5372253500952 1 0.0743026733398438 experiment 0.9255492998096 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93494810 chr11:93494790 nonsynonymous SNV 0.995 0 1 hm5C_associated_SNPs_36593 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:93494771-93494791
64251 chrX 107834414 107834414 1 + C T STAD 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGCTCTTGGGCTTCCAGGGCCTCCTGGCCCTGCT < 41bp 1 0.624271626235516 1 0.932164907455444 experiment 0.751456747528968 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834414 nonsynonymous SNV 0.999 5 13 hm5C_associated_SNPs_36594 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:107834414-107834415
64251 chr17 18832189 18832189 1 + A G STAD 18832171 + 18832151 18832191 41 TTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATA TTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCGTA < 41bp 1 0.36771001986785 1 0.159948170185089 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18832171 chr17:18832189 synonymous SNV . 0 39 hm5C_associated_SNPs_36595 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18832166-18832204
64251 chr18 72344625 72344625 1 + C A STAD 72344610 + 72344590 72344630 41 AATAGGACAGATTTGGAAATCCATGTGAAAAGGTGCCATGC AATAGGACAGATTTGGAAATCCATGTGAAAAGGTGACATGC < 41bp 1 0.12930186489111 1 0.240479439496994 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72344610 chr18:72344625 stopgain 0.004 0 36 hm5C_associated_SNPs_36596 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:72344624-72344654
64251 chr17 48557338 48557338 1 + C T STAD 48557327 + 48557307 48557347 41 CCTGGAGGCTGTGGCACAGGCAGCCCACCTGCCTGCAGACT CCTGGAGGCTGTGGCACAGGCAGCCCACCTGTCTGCAGACT < 41bp 1 0.506247702076612 1 0.37444144487381 experiment 0.987504595846777 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557327 chr17:48557338 nonsynonymous SNV 0.991 1 32 hm5C_associated_SNPs_36597 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48557329-48557353
64251 chr2 231327216 231327216 1 + C T STAD 231327230 + 231327210 231327250 41 TCTCAGCACCGAGAAGTGAGCCTGGTAAGGAAGTTTGGGAG TCTCAGTACCGAGAAGTGAGCCTGGTAAGGAAGTTTGGGAG < 41bp 1 0.425095986104199 1 0.320703268051147 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SP100 ENSG00000067066 CDS Human protein_coding chr2:231327230 chr2:231327216 nonsynonymous SNV 0.001 0 7 hm5C_associated_SNPs_36598 0 0 1 PPIG POSTAR2 ENCODE chr2:231327160-231327262
64251 chr17 28772965 28772965 1 + C A STAD 28772959 + 28772939 28772979 41 ATCTGGCTCTGGCTCTTTATCGATACCATTCCTACAAAGAC ATCTGGCTCTGGCTCTTTATCGATACAATTCCTACAAAGAC < 41bp 1 0.592093950520666 1 0.841158986091614 experiment 0.815812098958668 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPD ENSG00000108582 CDS Human protein_coding chr17:28772959 chr17:28772965 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_36599 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28772960-28772983
64251 chr19 42855624 42855624 1 + G A STAD 42855632 + 42855612 42855652 41 TCTAGCCAGTGCGCCTGGTGCCAGTCCACCCACACCTGCTT TCTAGCCAGTGCACCTGGTGCCAGTCCACCCACACCTGCTT < 41bp 1 0.0752643813059662 1 0.180868595838547 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42855632 chr19:42855624 nonsynonymous SNV 0.994 3 13 hm5C_associated_SNPs_36600 0 0 1 PPIG POSTAR2 ENCODE chr19:42855580-42855629
64251 chr8 145735838 145735838 1 + G A STAD 145735855 + 145735835 145735875 41 GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT GTGATCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT < 41bp 1 0.233141495493219 1 0.0862568318843842 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735855 chr8:145735838 nonsynonymous SNV 0.133 0 4 hm5C_associated_SNPs_36601 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:145735819-145735840
64251 chr8 145735838 145735838 1 + G A STAD 145735858 + 145735838 145735878 41 GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT ATCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT < 41bp 1 0.183313117065154 1 0.190681576728821 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735858 chr8:145735838 nonsynonymous SNV 0.133 0 1 hm5C_associated_SNPs_36602 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:145735819-145735840
64251 chr20 62631096 62631096 1 + C T STAD 62631080 + 62631060 62631100 41 AGCTACAAGTAGCTCGGAACCTTATCATGAAGGGGACGGAG AGCTACAAGTAGCTCGGAACCTTATCATGAAGGGGATGGAG < 41bp 1 0.138715517841435 1 0.0804316401481628 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62631080 chr20:62631096 nonsynonymous SNV 0.995 2 37 hm5C_associated_SNPs_36603 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:62631065-62631096
64251 chr16 56660799 56660799 1 + T C STAD 56660787 + 56660767 56660807 41 CTCTCACTCTCCCCTTCTTCCCCAGGCTGCTGTTCCTGCTG CTCTCACTCTCCCCTTCTTCCCCAGGCTGCTGCTCCTGCTG < 41bp 1 0.440432971162156 1 0.14299863576889 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56660787 chr16:56660799 synonymous SNV . 0 33 hm5C_associated_SNPs_36604 0 0 6 DDX55 POSTAR2 ENCODE chr16:56660796-56660822
64251 chr16 56660799 56660799 1 + T C STAD 56660788 + 56660768 56660808 41 TCTCACTCTCCCCTTCTTCCCCAGGCTGCTGTTCCTGCTGC TCTCACTCTCCCCTTCTTCCCCAGGCTGCTGCTCCTGCTGC < 41bp 1 0.661104860714006 1 0.342791974544525 experiment 0.677790278571988 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56660788 chr16:56660799 synonymous SNV . 0 32 hm5C_associated_SNPs_36605 0 0 6 DDX55 POSTAR2 ENCODE chr16:56660796-56660822
64251 chr16 56660799 56660799 1 + T C STAD 56660789 + 56660769 56660809 41 CTCACTCTCCCCTTCTTCCCCAGGCTGCTGTTCCTGCTGCC CTCACTCTCCCCTTCTTCCCCAGGCTGCTGCTCCTGCTGCC < 41bp 1 0.71999130251666 1 0.776679158210754 experiment 0.560017394966679 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56660789 chr16:56660799 synonymous SNV . 0 31 hm5C_associated_SNPs_36606 0 0 6 DDX55 POSTAR2 ENCODE chr16:56660796-56660822
64251 chr2 204259439 204259439 1 + C T STAD 204259431 + 204259411 204259451 41 TTCTTTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGC TTCTTTTTGTAGGCGGCACTCCCCCTATTGCACACTGGAGC < 41bp 1 0.294989828198576 1 0.197106510400772 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259431 chr2:204259439 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_36607 0 0 3 PPIG POSTAR2 ENCODE chr2:204259422-204259484
64251 chr2 204259439 204259439 1 + C T STAD 204259435 + 204259415 204259455 41 TTTTGTAGGCGGCACTCCCCCTATCGCACACTGGAGCCAGT TTTTGTAGGCGGCACTCCCCCTATTGCACACTGGAGCCAGT < 41bp 1 0.330427022542703 1 0.148659914731979 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259435 chr2:204259439 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_36608 0 0 3 PPIG POSTAR2 ENCODE chr2:204259422-204259484
64251 chr7 6631411 6631411 1 + C T STAD 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGCCCTCAAGGGAACAAAGCCGATGACAGTCGGATGAGCT < 41bp 1 0.125456383969473 1 0.108920186758041 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631411 synonymous SNV . 0 31 hm5C_associated_SNPs_36609 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6631411 6631411 1 + C T STAD 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGCCCTCAAGGGAACAAAGCCGATGACAGTCGGATGAGCTT < 41bp 1 0.387493202893219 1 0.466235280036926 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631411 synonymous SNV . 0 30 hm5C_associated_SNPs_36610 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 4830445 4830445 1 + C T STAD 4830446 + 4830426 4830466 41 TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCGTGC TGCTGCCCTGCCCAGGTGTTCCCCCCAGGTGGTCACCGTGC < 41bp 1 0.107627234741766 1 0.0138234794139862 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830446 chr7:4830445 nonsynonymous SNV 0.020 0 20 hm5C_associated_SNPs_36615 0 0 1 PPIG POSTAR2 ENCODE chr7:4830390-4830462
64251 chr11 61916008 61916008 1 + G T STAD 61915991 + 61915971 61916011 41 CCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAG CCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTTGAG < 41bp 1 0.229969136579808 1 0.353312313556671 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915991 chr11:61916008 synonymous SNV . 0 38 hm5C_associated_SNPs_36616 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:61915988-61916009
64251 chr11 61916008 61916008 1 + G T STAD 61915994 + 61915974 61916014 41 TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTTGAGGAG < 41bp 1 0.630575467098199 1 0.79191392660141 experiment 0.738849065803602 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915994 chr11:61916008 synonymous SNV . 0 35 hm5C_associated_SNPs_36617 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:61915988-61916009
64251 chr11 61916008 61916008 1 + G T STAD 61915997 + 61915977 61916017 41 GGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAGAAG GGCTGCAGAAGGAGCAGCTGCAGAGGGAACTTGAGGAGAAG < 41bp 1 0.385332499852599 1 0.521219432353973 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61915997 chr11:61916008 synonymous SNV . 0 32 hm5C_associated_SNPs_36618 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:61915988-61916009
64251 chr11 61916008 61916008 1 + G T STAD 61916006 + 61915986 61916026 41 AGGAGCAGCTGCAGAGGGAACTGGAGGAGAAGAAGAAGAAG AGGAGCAGCTGCAGAGGGAACTTGAGGAGAAGAAGAAGAAG < 41bp 1 0.562426667287602 1 0.491275995969772 experiment 0.875146665424796 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61916006 chr11:61916008 synonymous SNV . 0 23 hm5C_associated_SNPs_36619 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:61915988-61916009
64251 chr1 10381844 10381844 1 + C T STAD 10381855 + 10381835 10381875 41 ACTTCATTACGGGACTTACTCTGGGGCAATGCCGTGTACCT ACTTCATTATGGGACTTACTCTGGGGCAATGCCGTGTACCT < 41bp 1 0.78679199336697 1 0.946706831455231 experiment 0.42641601326606 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10381855 chr1:10381844 nonsynonymous SNV 0.998 4 10 hm5C_associated_SNPs_36625 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:10381822-10381845
64251 chr15 41650447 41650447 1 + T C STAD 41650441 + 41650421 41650461 41 CATTTTGAAGAACACAATTCCATGAATGAACTGAAGGTATG CATTTTGAAGAACACAATTCCATGAACGAACTGAAGGTATG < 41bp 1 0.465764527854641 1 0.162579774856567 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41650441 chr15:41650447 synonymous SNV . 0 27 hm5C_associated_SNPs_36626 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:41650362-41650450
64251 chr9 131559379 131559379 1 + C G STAD 131559385 + 131559365 131559405 41 AGGGCCACTGACTACCCTTGCCTCCTCATCCTGGACCCCCA AGGGCCACTGACTAGCCTTGCCTCCTCATCCTGGACCCCCA < 41bp 1 0.0494907716800402 1 0.0606066882610321 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D13 ENSG00000107021 CDS Human protein_coding chr9:131559385 chr9:131559379 stopgain 0.995 1 15 hm5C_associated_SNPs_36628 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131559372-131559410
64251 chr19 11474845 11474845 1 + G T STAD 11474841 + 11474821 11474861 41 TGTCTCTTTGTCTCAGGAACCCGAGGTCTGCAGGCCGCATT TGTCTCTTTGTCTCAGGAACCCGATGTCTGCAGGCCGCATT < 41bp 1 0.311191252235678 1 0.705055117607117 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474841 chr19:11474845 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_36629 0 0 3 BUD13 POSTAR2 ENCODE chr19:11474807-11474870
64251 chr14 64690024 64690024 1 + C T STAD 64690010 + 64689990 64690030 41 TGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGCATGTTA TGGAGAAGACTGTATTGAAGCTGAAGAAAAGGTGTATGTTA < 41bp 1 0.279939482486103 1 0.318186938762665 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64690010 chr14:64690024 nonsynonymous SNV 0.994 4 35 hm5C_associated_SNPs_36630 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64690018-64690031
64251 chr19 39860748 39860748 1 + G T STAD 39860763 + 39860743 39860783 41 TATTGGGAGCAATGCAAACACAGGTAAGTGGCGGGGGTGTC TATTGTGAGCAATGCAAACACAGGTAAGTGGCGGGGGTGTC < 41bp 1 0.685716643970976 1 0.491427361965179 experiment 0.628566712058049 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860763 chr19:39860748 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_36631 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:39860723-39860755
64251 chr11 47289880 47289880 1 + G A STAD 47289881 + 47289861 47289901 41 ATATGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATC ATATGTGGAAGCCCTGCATACCTACGTCTCCATCCACCATC < 41bp 1 0.0938778280830408 1 0.0124123990535736 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47289881 chr11:47289880 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_36632 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:47289880-47289907
64251 chr5 176722004 176722004 1 + G T STAD 176722024 + 176722004 176722044 41 GGCCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG TGCCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG < 41bp 1 0.113312151928787 1 0.0503663718700409 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176722024 chr5:176722004 nonsynonymous SNV 0.998 5 1 hm5C_associated_SNPs_36633 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:176721960-176722040
64251 chr17 80882895 80882895 1 + G A STAD 80882898 + 80882878 80882918 41 TCTCGTTGGCCTTGGGCGCCCTTCCAGGCTTCCTTCTGAAA TCTCGTTGGCCTTGGGCACCCTTCCAGGCTTCCTTCTGAAA < 41bp 1 0.144778535463784 1 0.0316500663757324 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCD ENSG00000141556 CDS Human protein_coding chr17:80882898 chr17:80882895 nonsynonymous SNV 0.002 0 18 hm5C_associated_SNPs_36635 0 0 3 BUD13 POSTAR2 ENCODE chr17:80882893-80882944
64251 chr6 27833333 27833333 1 + G T STAD 27833336 + 27833316 27833356 41 GAGATCCTGGAGCTGGCGGGCAACGCCGCCCGCGACAACAA GAGATCCTGGAGCTGGCTGGCAACGCCGCCCGCGACAACAA < 41bp 1 0.706395259165229 1 0.414592266082764 experiment 0.587209481669542 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833336 chr6:27833333 synonymous SNV . 0 18 hm5C_associated_SNPs_36636 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833298-27833336
64251 chr6 27833333 27833333 1 + G T STAD 27833344 + 27833324 27833364 41 GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCC GGAGCTGGCTGGCAACGCCGCCCGCGACAACAAGAAGACCC < 41bp 1 0.375557167221412 1 0.38513571023941 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833344 chr6:27833333 synonymous SNV . 0 10 hm5C_associated_SNPs_36637 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833298-27833336
64251 chr6 27833333 27833333 1 + G T STAD 27833345 + 27833325 27833365 41 GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCG GAGCTGGCTGGCAACGCCGCCCGCGACAACAAGAAGACCCG < 41bp 1 0.361556563402631 1 0.364019513130188 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833345 chr6:27833333 synonymous SNV . 0 9 hm5C_associated_SNPs_36638 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833298-27833336
64251 chr2 179247234 179247234 1 + A C STAD 179247214 + 179247194 179247234 41 TGAAGACAACACCAGTGTTGCAGACAATATTTCTCGGCAAA TGAAGACAACACCAGTGTTGCAGACAATATTTCTCGGCAAC < 41bp 1 0.111278975663151 1 0.22565495967865 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OSBPL6 ENSG00000079156 CDS Human protein_coding chr2:179247214 chr2:179247234 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_36639 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:179247201-179247239
64251 chr7 97833476 97833476 1 + C T STAD 97833471 + 97833451 97833491 41 CCAGCTTTTCCCTCACACACCTGACCGACTCGGACATCGAG CCAGCTTTTCCCTCACACACCTGACTGACTCGGACATCGAG < 41bp 1 0.192860669807955 1 0.0559093952178955 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833471 chr7:97833476 synonymous SNV . 0 26 hm5C_associated_SNPs_36640 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr7:97833450-97833477
64251 chr14 45620674 45620674 1 + A G STAD 45620670 + 45620650 45620690 41 AAGGGATATCCCAAATCTAACAAAATATCAGATAATTCTGG AAGGGATATCCCAAATCTAACAAAGTATCAGATAATTCTGG < 41bp 1 0.266479346771632 1 0.378987312316895 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FANCM ENSG00000187790 CDS Human protein_coding chr14:45620670 chr14:45620674 synonymous SNV . 0 25 hm5C_associated_SNPs_36648 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:45620654-45620680
64251 chr2 211465372 211465372 1 + A C STAD 211465360 + 211465340 211465380 41 AGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTT AGTTGAGTCCATTATGGCTACGGAAGACAGGCCGCTGTTTT < 41bp 1 0.566991015834297 1 0.845588386058807 experiment 0.866017968331407 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPS1 ENSG00000021826 CDS Human protein_coding chr2:211465360 chr2:211465372 nonsynonymous SNV 0.998 3 33 hm5C_associated_SNPs_36649 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr2:211465366-211465387
64251 chrX 153627879 153627879 1 + A G STAD 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGGGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT < 41bp 1 0.274220392105354 1 0.390862345695496 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627879 nonsynonymous SNV 0.985 1 4 hm5C_associated_SNPs_36650 0 0 51 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:153627840-153627880
64251 chr13 93879765 93879765 1 + T C STAD 93879771 + 93879751 93879791 41 GCTGCTGCTCTCCCTCCCCGCCGGGGCGGATGTGAAGGCTC GCTGCTGCTCTCCCCCCCCGCCGGGGCGGATGTGAAGGCTC < 41bp 1 0.603402773587643 1 0.85332727432251 experiment 0.793194452824713 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879771 chr13:93879765 nonsynonymous SNV 0.996 2 15 hm5C_associated_SNPs_36651 0 0 4 DDX3X POSTAR2 ENCODE chr13:93879737-93879818
64251 chr10 17275857 17275857 1 + G A STAD 17275853 + 17275833 17275873 41 AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAA AGCCTGACCTCACGGCTGCCCTGCATGACGTACGTCAGCAA < 41bp 1 0.785660662917816 1 0.899891793727875 experiment 0.428678674164368 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275853 chr10:17275857 nonsynonymous SNV 0.814 3 25 hm5C_associated_SNPs_36652 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:17275770-17275864
64251 chr10 17275857 17275857 1 + G A STAD 17275856 + 17275836 17275876 41 CTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATAT CTGACCTCACGGCTGCCCTGCATGACGTACGTCAGCAATAT < 41bp 1 0.350498423124269 1 0.0388129055500031 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275856 chr10:17275857 nonsynonymous SNV 0.814 3 22 hm5C_associated_SNPs_36653 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:17275770-17275864
64251 chr10 17275857 17275857 1 + G A STAD 17275861 + 17275841 17275881 41 CTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG CTCACGGCTGCCCTGCATGACGTACGTCAGCAATATGAAAG < 41bp 1 0.134036298459383 1 0.0206911563873291 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275861 chr10:17275857 nonsynonymous SNV 0.814 3 17 hm5C_associated_SNPs_36654 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:17275770-17275864
64251 chr15 75644698 75644698 1 + G A STAD 75644692 + 75644672 75644712 41 ATCCCCCCCTTTGAGAAGGCCCGCTCGGTCCTGGAGGCCCT ATCCCCCCCTTTGAGAAGGCCCGCTCAGTCCTGGAGGCCCT < 41bp 1 0.136117740877959 1 0.0340611934661865 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75644692 chr15:75644698 synonymous SNV . 0 27 hm5C_associated_SNPs_36655 0 0 2 PPIG POSTAR2 ENCODE chr15:75644667-75644706
64251 chr3 40503441 40503441 1 + A G STAD 40503435 + 40503415 40503455 41 ATTGATAATTTTCAGAGGAACAGAATAATCAAGAATGAAGT ATTGATAATTTTCAGAGGAACAGAATGATCAAGAATGAAGT < 41bp 1 0.56318716955211 1 0.217792958021164 experiment 0.87362566089578 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40503435 chr3:40503441 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_36656 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:40503424-40503456
64251 chr9 135919198 135919198 1 + C T STAD 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCTGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.0473291825903677 1 0.0222498178482056 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919198 nonsynonymous SNV 0.355 4 4 hm5C_associated_SNPs_36658 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr17 40766006 40766006 1 + C T STAD 40765994 + 40765974 40766014 41 CTTCCTCATGACCGGCTACACCCCTCTCACTACGGACCAGT CTTCCTCATGACCGGCTACACCCCTCTCACTATGGACCAGT < 41bp 1 0.198056170796745 1 0.0560669302940369 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765994 chr17:40766006 nonsynonymous SNV 0.995 2 33 hm5C_associated_SNPs_36659 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:40765968-40766007
64251 chr16 31091411 31091411 1 + C T STAD 31091428 + 31091408 31091448 41 CCCCGACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTTCCG CCCTGACGTTTCCGCTGCAGCGAGTGTGGGAAGGCCTTCCG < 41bp 1 0.706353333138292 1 0.752953290939331 experiment 0.587293333723417 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091428 chr16:31091411 stopgain 0.994 0 4 hm5C_associated_SNPs_36660 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:31091395-31091425
64251 chr12 53412624 53412624 1 + C T STAD 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGTGTATAGGGTGCCTCCAATTGACCGTTCCATC < 41bp 1 0.0487802888534532 1 0.0350538492202759 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412624 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_36661 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:53412588-53412630
64251 chr6 52269023 52269023 1 + G A STAD 52269024 + 52269004 52269044 41 TGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAG TGCCTGCAGTGCTGCCACCACAGCCCTTCTGAGGCACAAAG < 41bp 1 0.346471326117084 1 0.339354068040848 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52269024 chr6:52269023 nonsynonymous SNV 0.003 4 20 hm5C_associated_SNPs_36662 0 0 3 SND1 POSTAR2 ENCODE chr6:52268976-52269045
64251 chr5 17275368 17275368 1 + A T STAD 17275370 + 17275350 17275390 41 AAGAAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAA AAGAAGGGCTACAATGTGTACGACGAGAAAGCCAAGGAGAA < 41bp 1 0.530894272975362 1 0.257725894451141 experiment 0.938211454049276 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275370 chr5:17275368 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_36663 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275368 17275368 1 + A T STAD 17275373 + 17275353 17275393 41 AAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAAAGA AAGGGCTACAATGTGTACGACGAGAAAGCCAAGGAGAAAGA < 41bp 1 0.730522158135867 1 0.454726219177246 experiment 0.538955683728267 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275373 chr5:17275368 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_36664 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275368 17275368 1 + A T STAD 17275381 + 17275361 17275401 41 CAATGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG CAATGTGTACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG < 41bp 1 0.389288501123678 1 0.482883363962173 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275381 chr5:17275368 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_36665 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr7 73922447 73922447 1 + A G STAD 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGCGCTGTGACGTCCCCACCGACGGCTGCGGACC < 41bp 1 0.606933431217317 1 0.227782070636749 experiment 0.786133137565367 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922447 nonsynonymous SNV 0.991 1 28 hm5C_associated_SNPs_36667 0 0 3 DDX3X POSTAR2 ENCODE chr7:73922397-73922477
64251 chr19 34302362 34302362 1 + G A STAD 34302343 + 34302323 34302363 41 AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGT AAGGCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACAT < 41bp 1 0.106459613830198 1 0.0284124612808228 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302343 chr19:34302362 nonsynonymous SNV 0.992 1 40 hm5C_associated_SNPs_36671 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:34302361-34302362
64251 chr8 104432650 104432650 1 + G C STAD 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCACAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG < 41bp 1 0.0996992870317609 1 0.0579287111759186 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432650 nonsynonymous SNV 0.996 1 4 hm5C_associated_SNPs_36672 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:104432628-104432652
64251 chr5 10411480 10411480 1 + A T STAD 10411473 + 10411453 10411493 41 ATTCTTATTTATTGGGAGACCAGGAAGAAAATGAAAACAGT ATTCTTATTTATTGGGAGACCAGGAAGTAAATGAAAACAGT < 41bp 1 0.610842285006508 1 0.746097505092621 experiment 0.778315429986984 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411473 chr5:10411480 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_36674 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10411480-10411540
64251 chr6 4935819 4935819 1 + G C STAD 4935806 + 4935786 4935826 41 GACAACCAACATACAGACATCTGTTACAGGAGTGACTGCCA GACAACCAACATACAGACATCTGTTACAGGAGTCACTGCCA < 41bp 1 0.167845055446609 1 0.0683037638664246 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935806 chr6:4935819 synonymous SNV . 0 34 hm5C_associated_SNPs_36675 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr6:4935774-4935830
64251 chr4 110442692 110442692 1 + C T STAD 110442700 + 110442680 110442720 41 TCCAACAGGTGGCCGTGTGTCTGTATTTCAGACACAGTTAC TCCAACAGGTGGTCGTGTGTCTGTATTTCAGACACAGTTAC < 41bp 1 0.78002560295709 1 0.444793611764908 experiment 0.439948794085819 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SEC24B ENSG00000138802 CDS Human protein_coding chr4:110442700 chr4:110442692 synonymous SNV . 0 13 hm5C_associated_SNPs_36676 0 0 3 SF3B1 POSTAR2 ENCODE chr4:110442679-110442718
64251 chr2 113243554 113243554 1 + G A STAD 113243539 + 113243519 113243559 41 GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCACAAAG < 41bp 1 0.233849102905228 1 0.263939380645752 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113243539 chr2:113243554 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_36677 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:113243528-113243555
64251 chr17 79671731 79671731 1 + T A STAD 79671721 + 79671701 79671741 41 GGGTGGTGTGATGTCTGGGGCTGTCCCTGCTGCAGCAGCCC GGGTGGTGTGATGTCTGGGGCTGTCCCTGCAGCAGCAGCCC < 41bp 1 0.134547218820016 1 0.0547695755958557 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671721 chr17:79671731 synonymous SNV . 0 31 hm5C_associated_SNPs_36678 0 0 12 BUD13 POSTAR2 ENCODE chr17:79671707-79671748
64251 chr7 45662269 45662269 1 + C T STAD 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GTTTCACGGGCTTGGTATCCCAGTGCACAGCCCAGGAGCTG < 41bp 1 0.437669760993086 1 0.746009945869446 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662269 nonsynonymous SNV 0.925 5 16 hm5C_associated_SNPs_36679 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:45662269-45662313
64251 chr5 178987036 178987036 1 + C T STAD 178987020 + 178987000 178987040 41 AAGCTATCCCTGCTCCTGCCCCACAGCTTCTAAGTGCCAGA AAGCTATCCCTGCTCCTGCCCCACAGCTTCTAAGTGTCAGA < 41bp 1 0.319738094528937 1 0.0638091862201691 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RUFY1 ENSG00000176783 CDS Human protein_coding chr5:178987020 chr5:178987036 synonymous SNV . 0 37 hm5C_associated_SNPs_36680 0 0 1 SF3B4 POSTAR2 ENCODE chr5:178986958-178987048
64251 chr12 53428437 53428437 1 + G A STAD 53428436 + 53428416 53428456 41 AAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAG AAGAAACTCAGGAACGGGAACAGTCGAGGACAGGAAGTGAG < 41bp 1 0.205370593109842 1 0.39372307062149 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53428436 chr12:53428437 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_36681 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:53428420-53428440
64251 chr17 38450699 38450699 1 + T C STAD 38450687 + 38450667 38450707 41 CTAGAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT CTAGAGAAAAATGTAAGCCACAGCTGTTGAACCTCCCACCT < 41bp 1 0.549150311887523 1 0.273159265518188 experiment 0.901699376224953 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450687 chr17:38450699 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_36683 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38450644-38450700
64251 chr3 57293966 57293966 1 + G A STAD 57293965 + 57293945 57293985 41 ATGTTGTTTATGAAACTATGCGCCAAATCTTAGCTGCCCGG ATGTTGTTTATGAAACTATGCACCAAATCTTAGCTGCCCGG < 41bp 1 0.730041930426476 1 0.0713810622692108 experiment 0.539916139147048 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57293965 chr3:57293966 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_36684 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:57293953-57293991
64251 chr18 77474877 77474877 1 + G A STAD 77474860 + 77474840 77474880 41 CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCACCT < 41bp 1 0.590796440076735 1 0.207677125930786 experiment 0.81840711984653 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474860 chr18:77474877 nonsynonymous SNV 0.000 0 38 hm5C_associated_SNPs_36685 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr18 77474877 77474877 1 + G A STAD 77474881 + 77474861 77474901 41 GAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGA GAAGTCCTCCTCCTCCACCTCTGATGGCGAAAGCGAGGGGA < 41bp 1 0.431954461505575 1 0.435643136501312 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474881 chr18:77474877 nonsynonymous SNV 0.000 0 17 hm5C_associated_SNPs_36686 0 0 1 FXR2 POSTAR2 ENCODE chr18:77474808-77474887
64251 chr15 42105237 42105237 1 + T A STAD 42105224 + 42105204 42105244 41 GGAAAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGG GGAAAAAAGGCGGACAGTACCTTCTGCATCACGACCTCAGG < 41bp 1 0.25755860327924 1 0.0657824575901031 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42105224 chr15:42105237 nonsynonymous SNV 0.898 2 34 hm5C_associated_SNPs_36689 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:42105229-42105257
64251 chr7 73636001 73636001 1 + C T STAD 73636013 + 73635993 73636033 41 ACTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG ACTGGGGGTGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAG < 41bp 1 0.141221407326825 1 0.202085256576538 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636013 chr7:73636001 nonsynonymous SNV 0.028 0 9 hm5C_associated_SNPs_36690 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636001 73636001 1 + C T STAD 73636014 + 73635994 73636034 41 CTGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG CTGGGGGTGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGG < 41bp 1 0.502011129620644 1 0.31222477555275 experiment 0.995977740758712 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636014 chr7:73636001 nonsynonymous SNV 0.028 0 8 hm5C_associated_SNPs_36691 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636001 73636001 1 + C T STAD 73636015 + 73635995 73636035 41 TGGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA TGGGGGTGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGA < 41bp 1 0.218000826146943 1 0.301795840263367 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636015 chr7:73636001 nonsynonymous SNV 0.028 0 7 hm5C_associated_SNPs_36692 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636001 73636001 1 + C T STAD 73636016 + 73635996 73636036 41 GGGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC GGGGGTGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGAC < 41bp 1 0.509186709011271 1 0.467643439769745 experiment 0.981626581977458 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636016 chr7:73636001 nonsynonymous SNV 0.028 0 6 hm5C_associated_SNPs_36693 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr7 73636001 73636001 1 + C T STAD 73636017 + 73635997 73636037 41 GGGGCGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA GGGGTGGTTCTCGAAGCCCCCAGAAGGTGAGGCGAAGGACA < 41bp 1 0.635198083731814 1 0.877565503120422 experiment 0.729603832536372 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636017 chr7:73636001 nonsynonymous SNV 0.028 0 5 hm5C_associated_SNPs_36694 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr6 31713064 31713064 1 + C T STAD 31713049 + 31713029 31713069 41 TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGCCAGTG TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGTCAGTG < 41bp 1 0.339088730112347 1 0.407576620578766 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31713049 chr6:31713064 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_36695 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31713059-31713092
64251 chr2 32958941 32958941 1 + G A STAD 32958943 + 32958923 32958963 41 CTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGT CTACATCTGTATTGGAACACCTGAAGATTTTCTATTGCTGT < 41bp 1 0.610138929058942 1 0.490734308958054 experiment 0.779722141882117 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32958943 chr2:32958941 nonsynonymous SNV 0.995 4 19 hm5C_associated_SNPs_36696 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:32958932-32958955
64251 chr22 20128442 20128442 1 + G A STAD 20128461 + 20128441 20128481 41 CGCCTTTCCTTAGGCCTGAACTCCTGGACCGAGCTGCACCG CACCTTTCCTTAGGCCTGAACTCCTGGACCGAGCTGCACCG < 41bp 1 0.338128153302846 1 0.761453866958618 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20128461 chr22:20128442 synonymous SNV . 0 2 hm5C_associated_SNPs_36697 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr22:20128440-20128460
64251 chr6 142758632 142758632 1 + G A STAD 142758630 + 142758610 142758650 41 ATGTTCAGAAACAGTGGCGGCAGCATCTCTGCTGTGGTAGA ATGTTCAGAAACAGTGGCGGCAACATCTCTGCTGTGGTAGA < 41bp 1 0.298930727539019 1 0.253793001174927 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142758630 chr6:142758632 synonymous SNV . 0 23 hm5C_associated_SNPs_36698 0 0 2 IGF2BP1 POSTAR2 ENCODE chr6:142758609-142758656
64251 chr19 13010517 13010517 1 + T G STAD 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTCGGTCAGATGTGTTCCTTAAAAAGA < 41bp 1 0.355597148022588 1 0.355500847101212 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010517 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_36699 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:13010496-13010530
64251 chr1 229783427 229783427 1 + G T STAD 229783428 + 229783408 229783448 41 TCCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTC TCCCTTTGGACCATCTGAATCCGCTGGAGTATGGAAGCGTC < 41bp 1 0.381265123141236 1 0.47354257106781 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control URB2 ENSG00000135763 CDS Human protein_coding chr1:229783428 chr1:229783427 nonsynonymous SNV 0.243 0 20 hm5C_associated_SNPs_36700 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229783383-229783431
64251 chr2 182786932 182786932 1 + G A STAD 182786940 + 182786920 182786960 41 GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG GGTGGCTCTAACACCAACAGCTCCTTCTAGAACAGGCTCTG < 41bp 1 0.428787392646857 1 0.169103711843491 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786940 chr2:182786932 synonymous SNV . 0 13 hm5C_associated_SNPs_36701 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:182786896-182786937
64251 chr15 69728955 69728955 1 + C T STAD 69728947 + 69728927 69728967 41 TGCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGAT TGCAGAGTTTTCCACCTTTGCCATCATGTGAAATTTTGGAT < 41bp 1 0.0601188435436476 1 0.334998786449432 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728947 chr15:69728955 synonymous SNV . 0 29 hm5C_associated_SNPs_36702 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:69728940-69728960
64251 chr15 69728955 69728955 1 + C T STAD 69728948 + 69728928 69728968 41 GCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGATA GCAGAGTTTTCCACCTTTGCCATCATGTGAAATTTTGGATA < 41bp 1 0.581300220695014 1 0.118599593639374 experiment 0.837399558609972 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728948 chr15:69728955 synonymous SNV . 0 28 hm5C_associated_SNPs_36703 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:69728940-69728960
64251 chr1 109811556 109811556 1 + G A STAD 109811544 + 109811524 109811564 41 CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGG CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCACTACGAGG < 41bp 1 0.0465874024391999 1 0.0904102325439453 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811544 chr1:109811556 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_36704 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811556 109811556 1 + G A STAD 109811552 + 109811532 109811572 41 ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGT ACTTTGCTGGGGCCAAGCTGCCCCACTACGAGGCCCTGCGT < 41bp 1 0.32696877835384 1 0.0983926057815552 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811552 chr1:109811556 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_36705 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811556 109811556 1 + G A STAD 109811553 + 109811533 109811573 41 CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTG CTTTGCTGGGGCCAAGCTGCCCCACTACGAGGCCCTGCGTG < 41bp 1 0.110597602597988 1 0.21556481719017 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811553 chr1:109811556 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_36706 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811556 109811556 1 + G A STAD 109811554 + 109811534 109811574 41 TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGG TTTGCTGGGGCCAAGCTGCCCCACTACGAGGCCCTGCGTGG < 41bp 1 0.0862036598867546 1 0.161139398813248 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811554 chr1:109811556 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_36707 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811556 109811556 1 + G A STAD 109811555 + 109811535 109811575 41 TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGGG TTGCTGGGGCCAAGCTGCCCCACTACGAGGCCCTGCGTGGG < 41bp 1 0.280315225387823 1 0.258492648601532 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811555 chr1:109811556 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_36708 0 0 4 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr2 160050772 160050772 1 + G A STAD 160050773 + 160050753 160050793 41 GGCCTTGTCCAACAGGTGAGCCGTCTCCTGATTTTGGGAGG GGCCTTGTCCAACAGGTGAACCGTCTCCTGATTTTGGGAGG < 41bp 1 0.0483479807842481 1 0.21909436583519 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TANC1 ENSG00000115183 CDS Human protein_coding chr2:160050773 chr2:160050772 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_36709 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr2:160050766-160050797
64251 chrX 114877715 114877715 1 + A G STAD 114877725 + 114877705 114877745 41 TGATGTTGTCAGTGGAAACCCCAAACTCAACTTAGCTTTCG TGATGTTGTCGGTGGAAACCCCAAACTCAACTTAGCTTTCG < 41bp 1 0.444412266989058 1 0.27906322479248 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLS3 ENSG00000102024 CDS Human protein_coding chrX:114877725 chrX:114877715 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_36711 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:114877688-114877721
64251 chr6 27806762 27806762 1 + C T STAD 27806746 + 27806726 27806766 41 AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGCCAAG AGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGTCAAG < 41bp 1 0.596521217397306 1 0.329190909862518 experiment 0.806957565205388 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806746 chr6:27806762 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_36712 0 0 7 METAP2 POSTAR2 ENCODE chr6:27806700-27806777
64251 chr11 120317151 120317151 1 + G A STAD 120317136 + 120317116 120317156 41 GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCCACT GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCACCACT < 41bp 1 0.361172248592658 1 0.423886328935623 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120317136 chr11:120317151 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_36713 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:120317116-120317155
64251 chr5 139060723 139060723 1 + G A STAD 139060711 + 139060691 139060731 41 GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAATCCGACTT < 41bp 1 0.511495268976177 1 0.21088382601738 experiment 0.977009462047646 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060711 chr5:139060723 synonymous SNV . 0 33 hm5C_associated_SNPs_36714 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr5:139060715-139060741
64251 chr7 100275127 100275127 1 + G A STAD 100275144 + 100275124 100275164 41 CACGCCATCCCGCTGCGCTCCTCCTGGGTAATGACCTGTGC CACACCATCCCGCTGCGCTCCTCCTGGGTAATGACCTGTGC < 41bp 1 0.583411213376227 1 0.712117075920105 experiment 0.833177573247547 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275144 chr7:100275127 nonsynonymous SNV 0.856 3 4 hm5C_associated_SNPs_36716 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:100275119-100275147
64251 chr20 33764049 33764049 1 + C A STAD 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTCTTCGAAGTGGATGTGAATGGGAG < 41bp 1 0.704504277214866 1 0.755295753479004 experiment 0.590991445570269 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764049 nonsynonymous SNV 0.952 3 29 hm5C_associated_SNPs_36718 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr10 17276765 17276765 1 + A G STAD 17276757 + 17276737 17276777 41 CGCCAGGCAAAGCAGGAGTCCACTGAGTACCGGAGACAGGT CGCCAGGCAAAGCAGGAGTCCACTGAGTGCCGGAGACAGGT < 41bp 1 0.292400719605124 1 0.0801100730895996 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276757 chr10:17276765 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_36720 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr16 722950 722950 1 + C T STAD 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACATGGACGGGCAGATCCCCTGCCTCTTTGTCTCCTC < 41bp 1 0.442403959531445 1 0.0970345139503479 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722950 nonsynonymous SNV 0.990 0 20 hm5C_associated_SNPs_36721 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr1 36028847 36028847 1 + C A STAD 36028846 + 36028826 36028866 41 ACCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAG ACCTGACCGTTGAAGATGGGCACCGGGAGATCCTGATCAAG < 41bp 1 0.523371912052041 1 0.11153507232666 experiment 0.953256175895918 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028846 chr1:36028847 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_36722 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36028847 36028847 1 + C A STAD 36028848 + 36028828 36028868 41 CTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGGA CTGACCGTTGAAGATGGGCACCGGGAGATCCTGATCAAGGA < 41bp 1 0.452969873894851 1 0.433260321617126 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028848 chr1:36028847 nonsynonymous SNV 0.997 4 20 hm5C_associated_SNPs_36723 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36755130 36755130 1 + C T STAD 36755116 + 36755096 36755136 41 GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATTGGGGCA < 41bp 1 0.446640161942534 1 0.376935213804245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755116 chr1:36755130 nonsynonymous SNV 0.993 4 35 hm5C_associated_SNPs_36724 0 0 15 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:36755120-36755140
64251 chr2 202141612 202141612 1 + T A STAD 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAAACA < 41bp 1 0.239177451776463 1 0.207731187343597 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141612 nonsynonymous SNV 0.362 4 39 hm5C_associated_SNPs_36725 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:202141587-202141622
64251 chr16 4700454 4700454 1 + T C STAD 4700472 + 4700452 4700492 41 GATCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCT GACCTGAACTTCCTGGGCAGCCGCCCGGTCCAGGTGGGTCT < 41bp 1 0.0946833178794894 1 0.0814388394355774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MGRN1 ENSG00000102858 CDS Human protein_coding chr16:4700472 chr16:4700454 synonymous SNV . 0 3 hm5C_associated_SNPs_36727 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:4700431-4700462
64251 chr22 41322429 41322429 1 + A G STAD 41322444 + 41322424 41322464 41 CAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT CAGCCGGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT < 41bp 1 0.340864604716423 1 0.428288191556931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322444 chr22:41322429 nonsynonymous SNV 0.005 0 6 hm5C_associated_SNPs_36728 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:41322392-41322432
64251 chr15 41247781 41247781 1 + G A STAD 41247789 + 41247769 41247809 41 GCGCCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG GCGCCTGAAGAGACCATTGCCACGCAGATCCTGGCCTGCCG < 41bp 1 0.729933370459798 1 0.446954250335693 experiment 0.540133259080404 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247789 chr15:41247781 nonsynonymous SNV 0.221 1 13 hm5C_associated_SNPs_36729 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41247752-41247784
64251 chr2 207636937 207636937 1 + A T STAD 207636939 + 207636919 207636959 41 TGTCCTTTAAGAATAATGATCAACATATTGCAGTCCTGCAA TGTCCTTTAAGAATAATGTTCAACATATTGCAGTCCTGCAA < 41bp 1 0.630789960544124 1 0.234112858772278 experiment 0.738420078911752 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207636939 chr2:207636937 nonsynonymous SNV 0.944 0 19 hm5C_associated_SNPs_36731 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:207636923-207636963
64251 chr2 217366124 217366124 1 + G A STAD 217366129 + 217366109 217366149 41 GGAGTTGAAAGACCAGTAGACGCTCCTCTACTCTTTGAGAC GGAGTTGAAAGACCAATAGACGCTCCTCTACTCTTTGAGAC < 41bp 1 0.467355423025001 1 0.0951938629150391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217366129 chr2:217366124 synonymous SNV . 0 16 hm5C_associated_SNPs_36732 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:217365985-217366323
64251 chr2 217366124 217366124 1 + G A STAD 217366131 + 217366111 217366151 41 AGTTGAAAGACCAGTAGACGCTCCTCTACTCTTTGAGACAT AGTTGAAAGACCAATAGACGCTCCTCTACTCTTTGAGACAT < 41bp 1 0.759551253417067 1 0.0619652271270752 experiment 0.480897493165866 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217366131 chr2:217366124 synonymous SNV . 0 14 hm5C_associated_SNPs_36733 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:217365985-217366323
64251 chr7 133164813 133164813 1 + G A STAD 133164812 + 133164792 133164832 41 GTTTCTCTGCAGGTTCGAATCGTCCTCCCATGCCATCAGTA GTTTCTCTGCAGGTTCGAATCATCCTCCCATGCCATCAGTA < 41bp 1 0.20849320550638 1 0.0720341205596924 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164812 chr7:133164813 synonymous SNV . 0 22 hm5C_associated_SNPs_36734 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:133164792-133164813
64251 chr2 113315657 113315657 1 + A G STAD 113315643 + 113315623 113315663 41 ACCTTTTTGCTACTGGGAATCTGCGTTCTAAAACAGGTAAA ACCTTTTTGCTACTGGGAATCTGCGTTCTAAAACGGGTAAA < 41bp 1 0.581052289937657 1 0.738670468330383 experiment 0.837895420124685 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113315643 chr2:113315657 synonymous SNV . 0 35 hm5C_associated_SNPs_36735 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:113315620-113315658
64251 chr17 4685824 4685824 1 + G A STAD 4685815 + 4685795 4685835 41 CAGATGCTGCGCTCGGTCTTCTCCTCGGCGTTCGGGGTGCT CAGATGCTGCGCTCGGTCTTCTCCTCGGCATTCGGGGTGCT < 41bp 1 0.407355824803606 1 0.21045383810997 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4685815 chr17:4685824 synonymous SNV . 0 30 hm5C_associated_SNPs_36736 0 0 2 RPS3 POSTAR2 ENCODE chr17:4685819-4685857
64251 chr16 29818097 29818097 1 + C T STAD 29818116 + 29818096 29818136 41 GCGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCC GTGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCC < 41bp 1 0.191548894062428 1 0.0557226240634918 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818116 chr16:29818097 synonymous SNV . 0 2 hm5C_associated_SNPs_36737 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:29817940-29818140
64251 chr16 29818097 29818097 1 + C T STAD 29818117 + 29818097 29818137 41 CGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCCC TGGCCTCATGAACTCCTTCCCGCCACCTCAGGGTCACGCCC < 41bp 1 0.781311273209689 1 0.868819952011108 experiment 0.437377453580621 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29818117 chr16:29818097 synonymous SNV . 0 1 hm5C_associated_SNPs_36738 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:29817940-29818140
64251 chr7 23235487 23235487 1 + A G STAD 23235473 + 23235453 23235493 41 TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGCTTG TTCAGGTTTTACAGACATTTCACCAGAGGAATTGGGGCTTG < 41bp 1 0.747052454600411 1 0.609747052192688 experiment 0.505895090799178 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235473 chr7:23235487 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_36739 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23235463-23235520
64251 chr19 11145661 11145661 1 + C T STAD 11145668 + 11145648 11145688 41 TCATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGAC TCATGGAGGAGGATGAGCTCCCCTCGTGGATCATCAAGGAC < 41bp 1 0.0827526336081315 1 0.112086802721024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145668 chr19:11145661 synonymous SNV . 0 14 hm5C_associated_SNPs_36740 1 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145661 11145661 1 + C T STAD 11145669 + 11145649 11145689 41 CATGGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACG CATGGAGGAGGATGAGCTCCCCTCGTGGATCATCAAGGACG < 41bp 1 0.203049374546142 1 0.162261873483658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145669 chr19:11145661 synonymous SNV . 0 13 hm5C_associated_SNPs_36741 1 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr19 11145661 11145661 1 + C T STAD 11145672 + 11145652 11145692 41 GGAGGAGGACGAGCTCCCCTCGTGGATCATCAAGGACGACG GGAGGAGGATGAGCTCCCCTCGTGGATCATCAAGGACGACG < 41bp 1 0.587987184946768 1 0.696264922618866 experiment 0.824025630106465 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145672 chr19:11145661 synonymous SNV . 0 10 hm5C_associated_SNPs_36742 1 0 4 FMR1 POSTAR2 ENCODE chr19:11145640-11145673
64251 chr10 102763509 102763509 1 + C T STAD 102763493 + 102763473 102763513 41 TGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCGACT TGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCTGACT < 41bp 1 0.401861029136419 1 0.275818973779678 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763493 chr10:102763509 synonymous SNV . 0 37 hm5C_associated_SNPs_36744 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr10:102763503-102763530
64251 chr4 5733332 5733332 1 + A G STAD 5733343 + 5733323 5733363 41 AGGTTTCTCAGCCGCACCTTCCTCCGGGTGAACGCCTTCCC AGGTTTCTCGGCCGCACCTTCCTCCGGGTGAACGCCTTCCC < 41bp 1 0.0549165807766399 1 0.0833012461662292 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient EVC ENSG00000072840 CDS Human protein_coding chr4:5733343 chr4:5733332 nonsynonymous SNV 0.002 0 10 hm5C_associated_SNPs_36746 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr1 94012462 94012462 1 + T C STAD 94012454 + 94012434 94012474 41 AGAATCCACAAATGGGGGATCCAGGGAGTTTGCAGCCTAAA AGAATCCACAAATGGGGGATCCAGGGAGCTTGCAGCCTAAA < 41bp 1 0.318513693126084 1 0.630068600177765 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FNBP1L ENSG00000137942 CDS Human protein_coding chr1:94012454 chr1:94012462 synonymous SNV . 0 29 hm5C_associated_SNPs_36747 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:94012414-94012472
64251 chr3 49060598 49060598 1 + C T STAD 49060591 + 49060571 49060611 41 CTTCACTTACATCTTTGGGCCAAGCTGCTCAATGAACCGCC CTTCACTTACATCTTTGGGCCAAGCTGTTCAATGAACCGCC < 41bp 1 0.288418265246377 1 0.432418286800385 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060591 chr3:49060598 nonsynonymous SNV 0.005 2 28 hm5C_associated_SNPs_36748 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49060562-49060648
64251 chr19 10200691 10200691 1 + G A STAD 10200684 + 10200664 10200704 41 CAGTTTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCG CAGTTTGCCTGCTCCTCCTGCGACCACATCTGGTGGCGCCG < 41bp 1 0.209226487168186 1 0.471001207828522 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200684 chr19:10200691 nonsynonymous SNV 0.998 0 28 hm5C_associated_SNPs_36749 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr19 10200691 10200691 1 + G A STAD 10200688 + 10200668 10200708 41 TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGCGTG TTGCCTGCTCCTCCTGCGACCACATCTGGTGGCGCCGCGTG < 41bp 1 0.373718208671044 1 0.268994629383087 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200688 chr19:10200691 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_36750 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr4 2943337 2943337 1 - G A STAD 2943341 - 2943321 2943361 41 AAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCACCCG AAGCCCTCCTCACGGATCACCTGGTGGACTGCAGCCACCCG < 41bp 1 0.658971660131499 1 0.507306277751923 experiment 0.682056679737002 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOP14 ENSG00000087269 CDS Human protein_coding chr4:2943341 chr4:2943337 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_36752 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:2943320-2943340
64251 chr22 39826100 39826100 1 + G A STAD 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTCCACTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA < 41bp 1 0.0861321240192761 1 0.184441298246384 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826100 nonsynonymous SNV 0.984 1 8 hm5C_associated_SNPs_36758 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr16 53358288 53358288 1 + G T STAD 53358269 + 53358249 53358289 41 CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTGG CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTTG < 41bp 1 0.755589287548687 1 0.827233552932739 experiment 0.488821424902625 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53358269 chr16:53358288 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_36759 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:53358272-53358295
64251 chr1 198231732 198231732 1 + C T STAD 198231736 + 198231716 198231756 41 AATGGATGCCAAAGCACGTGCTGATTGCATCAAAGAAATAG AATGGATGCCAAAGCATGTGCTGATTGCATCAAAGAAATAG < 41bp 1 0.20943667974471 1 0.0947313904762268 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198231736 chr1:198231732 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_36760 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:198231729-198231739
64251 chr1 198231732 198231732 1 + C T STAD 198231746 + 198231726 198231766 41 AAAGCACGTGCTGATTGCATCAAAGAAATAGATCTTCTTAA AAAGCATGTGCTGATTGCATCAAAGAAATAGATCTTCTTAA < 41bp 1 0.297207096149452 1 0.731647610664368 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198231746 chr1:198231732 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_36761 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:198231729-198231739
64251 chr17 46128574 46128574 1 + C T STAD 46128578 + 46128558 46128598 41 GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCC GGACGTGGATACTTACTTGACCTCACAGCTTCCCCCACTCC < 41bp 1 0.227390301498445 1 0.0230481028556824 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128578 chr17:46128574 synonymous SNV . 0 17 hm5C_associated_SNPs_36765 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:46128500-46128580
64251 chr17 46128574 46128574 1 + C T STAD 46128592 + 46128572 46128612 41 ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG ACTTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG < 41bp 1 0.16948421263791 1 0.0754382610321045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128592 chr17:46128574 synonymous SNV . 0 3 hm5C_associated_SNPs_36766 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:46128500-46128580
64251 chr12 113379501 113379501 1 + C T STAD 113379481 + 113379461 113379501 41 GGACCAGAGGGCCCGCCGTGCAGAGATCCTCAGTGAGATGC GGACCAGAGGGCCCGCCGTGCAGAGATCCTCAGTGAGATGT < 41bp 1 0.584955936712942 1 0.464042186737061 experiment 0.830088126574115 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OAS3 ENSG00000111331 CDS Human protein_coding chr12:113379481 chr12:113379501 nonsynonymous SNV 0.003 0 41 hm5C_associated_SNPs_36767 0 0 2 BUD13 POSTAR2 ENCODE chr12:113379464-113379593
64251 chr11 95546138 95546138 1 + G C STAD 95546139 + 95546119 95546159 41 CTTCAAGATAAGATTCGACGCTTGGAACTTGAGAGGATTCA CTTCAAGATAAGATTCGACCCTTGGAACTTGAGAGGATTCA < 41bp 1 0.460909257792798 1 0.0597018599510193 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP57 ENSG00000166037 CDS Human protein_coding chr11:95546139 chr11:95546138 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_36768 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:95546100-95546140
64251 chr1 10394612 10394612 1 + G A STAD 10394600 + 10394580 10394620 41 CATTTGTTTACCTGAGCAATCTGCTGTATCCCGTGCCCCTG CATTTGTTTACCTGAGCAATCTGCTGTATCCCATGCCCCTG < 41bp 1 0.481191055550091 1 0.488134384155273 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10394600 chr1:10394612 nonsynonymous SNV 0.945 4 33 hm5C_associated_SNPs_36769 0 0 3 EIF3H POSTAR2 ENCODE chr1:10394595-10394659
64251 chr6 32123534 32123534 1 + C T STAD 32123537 + 32123517 32123557 41 TTCTTTCATCTCCCTCTCCTCTCCACAGATGGGACAGTATG TTCTTTCATCTCCCTCTTCTCTCCACAGATGGGACAGTATG < 41bp 1 0.732131802795224 1 0.941307544708252 experiment 0.535736394409552 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control PPT2 ENSG00000221988;ENSG00000258388 CDS Human other chr6:32123537 chr6:32123534 nonsynonymous SNV 0.998 5 18 hm5C_associated_SNPs_36770 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32123501-32123539
64251 chr8 145583773 145583773 1 + A G STAD 145583775 + 145583755 145583795 41 TGCCCTTCTGGTCGCTTCAGCTGCTGCCTTCCAGGGTCTTC TGCCCTTCTGGTCGCTTCGGCTGCTGCCTTCCAGGGTCTTC < 41bp 1 0.285444911351919 1 0.0960708856582642 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC52A2 ENSG00000185803;ENSG00000185803 exonic;splicing Human other chr8:145583775 chr8:145583773 synonymous SNV 0.017 0 19 hm5C_associated_SNPs_36771 0 0 1 DDX55 POSTAR2 ENCODE chr8:145583725-145583788
64251 chr1 112305362 112305362 1 + T C STAD 112305377 + 112305357 112305397 41 TGGATTGGGAGACATACATGCATCGGATTGGGAGAGCTGGC TGGATCGGGAGACATACATGCATCGGATTGGGAGAGCTGGC < 41bp 1 0.42307615212803 1 0.151143282651901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305377 chr1:112305362 nonsynonymous SNV 0.998 1 6 hm5C_associated_SNPs_36772 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:112305319-112305375
64251 chr11 33308272 33308272 1 + G A STAD 33308258 + 33308238 33308278 41 AGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCA AGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTACAGGCA < 41bp 1 0.759698050380436 1 0.469488859176636 experiment 0.480603899239128 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33308258 chr11:33308272 synonymous SNV . 0 35 hm5C_associated_SNPs_36773 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:33308262-33308297
64251 chr4 6862970 6862970 1 + G A STAD 6862975 + 6862955 6862995 41 GATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAG GATTCGCCCTCGCTCATGGTCTTCTGGCTCCAGTGAAGCAG < 41bp 1 0.320457519767716 1 0.0481880307197571 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6862975 chr4:6862970 synonymous SNV . 0 16 hm5C_associated_SNPs_36774 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:6862960-6862973
64251 chr3 32932817 32932817 1 + G A STAD 32932816 + 32932796 32932836 41 CAACTACCCTTGGGATGTGGCGGTGAATTCTGAGGGCAAGA CAACTACCCTTGGGATGTGGCAGTGAATTCTGAGGGCAAGA < 41bp 1 0.239949332025193 1 0.16388127207756 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932816 chr3:32932817 synonymous SNV . 0 22 hm5C_associated_SNPs_36775 0 0 2 GRSF1 POSTAR2 ENCODE chr3:32932783-32932839
64251 chr11 64054328 64054328 1 + C T STAD 64054320 + 64054300 64054340 41 CCCGTCTGCCTGCAGTTCTTCACCTTGACGCTTATGAACCT CCCGTCTGCCTGCAGTTCTTCACCTTGATGCTTATGAACCT < 41bp 1 0.317462684771939 1 0.140361398458481 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPR137 ENSG00000173264 CDS Human protein_coding chr11:64054320 chr11:64054328 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_36776 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64054291-64054332
64251 chr4 54244047 54244047 1 + C T STAD 54244030 + 54244010 54244050 41 CGGCCGGCGAGGTCGAGCGCCTAGTGTCGGAGCTGAGCGGC CGGCCGGCGAGGTCGAGCGCCTAGTGTCGGAGCTGAGTGGC < 41bp 1 0.720351509144252 1 0.294541358947754 experiment 0.559296981711497 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244030 chr4:54244047 synonymous SNV . 0 38 hm5C_associated_SNPs_36777 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:54244039-54244063
64251 chr4 54244047 54244047 1 + C T STAD 54244042 + 54244022 54244062 41 TCGAGCGCCTAGTGTCGGAGCTGAGCGGCGGGACCGGAGGG TCGAGCGCCTAGTGTCGGAGCTGAGTGGCGGGACCGGAGGG < 41bp 1 0.783956973527952 1 0.520363509654999 experiment 0.432086052944097 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54244042 chr4:54244047 synonymous SNV . 0 26 hm5C_associated_SNPs_36778 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:54244039-54244063
64251 chr1 16199371 16199371 1 + T C STAD 16199355 + 16199335 16199375 41 AATTCTTCCCAAGAGGGGATCTGAAGGAGGAGTGGCTGCCT AATTCTTCCCAAGAGGGGATCTGAAGGAGGAGTGGCCGCCT < 41bp 1 0.486868114424013 1 0.876042723655701 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16199355 chr1:16199371 synonymous SNV . 0 37 hm5C_associated_SNPs_36779 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:16199300-16199380
64251 chr17 49247316 49247316 1 + G A STAD 49247300 + 49247280 49247320 41 CATTTTCACACTTTCGAGGTCTGGGAGGGGCTGAACGTGGT CATTTTCACACTTTCGAGGTCTGGGAGGGGCTGAACATGGT < 41bp 1 0.577458446211024 1 0.316820859909058 experiment 0.845083107577951 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247300 chr17:49247316 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_36780 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr17 49247316 49247316 1 + G A STAD 49247310 + 49247290 49247330 41 CTTTCGAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGC CTTTCGAGGTCTGGGAGGGGCTGAACATGGTGAAGACAGGC < 41bp 1 0.588865080870911 1 0.423196315765381 experiment 0.822269838258178 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247310 chr17:49247316 nonsynonymous SNV 0.998 2 27 hm5C_associated_SNPs_36781 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr17 49247316 49247316 1 + G A STAD 49247315 + 49247295 49247335 41 GAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGCCGAGT GAGGTCTGGGAGGGGCTGAACATGGTGAAGACAGGCCGAGT < 41bp 1 0.559159222676503 1 0.557732820510864 experiment 0.881681554646995 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247315 chr17:49247316 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_36782 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr19 45162145 45162145 1 + G T STAD 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTTGCACTGT < 41bp 1 0.660425588626399 1 0.309503257274628 experiment 0.679148822747202 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162145 nonsynonymous SNV 0.015 1 34 hm5C_associated_SNPs_36783 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr19 45162145 45162145 1 + G T STAD 45162140 + 45162120 45162160 41 TCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG TCCAAATGTTCCCGTGAGGTCCTTTTGCACTGTCATCTGTG < 41bp 1 0.0215548248218199 1 0.0331388711929321 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162140 chr19:45162145 nonsynonymous SNV 0.015 1 26 hm5C_associated_SNPs_36784 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr3 49212181 49212181 1 + G A STAD 49212179 + 49212159 49212199 41 CCAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGT CCAATTCCATTGACAGGGGGCCACCAGGGCAAGCTCCCGGT < 41bp 1 0.0420646880920306 1 0.174683809280396 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212179 chr3:49212181 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_36785 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr3 49212181 49212181 1 + G A STAD 49212180 + 49212160 49212200 41 CAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGTG CAATTCCATTGACAGGGGGCCACCAGGGCAAGCTCCCGGTG < 41bp 1 0.603911325724489 1 0.184136390686035 experiment 0.792177348551022 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212180 chr3:49212181 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_36786 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr19 58904820 58904820 1 + C T STAD 58904832 + 58904812 58904852 41 ACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACC ACGACAGGTTGTGGATGTGTCCCCCCTGCGCCGTGTGAACC < 41bp 1 0.291500109309387 1 0.0568946301937103 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904832 chr19:58904820 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_36787 0 0 54 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr19 58904820 58904820 1 + C T STAD 58904833 + 58904813 58904853 41 CGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCA CGACAGGTTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCA < 41bp 1 0.442956716312429 1 0.107477694749832 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904833 chr19:58904820 nonsynonymous SNV 0.998 4 8 hm5C_associated_SNPs_36788 0 0 54 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr19 58904820 58904820 1 + C T STAD 58904834 + 58904814 58904854 41 GACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAG GACAGGTTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAG < 41bp 1 0.470802818623955 1 0.117296785116196 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904834 chr19:58904820 nonsynonymous SNV 0.998 4 7 hm5C_associated_SNPs_36789 0 0 54 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr19 58904820 58904820 1 + C T STAD 58904840 + 58904820 58904860 41 CTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGTGAGC TTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGTGAGC < 41bp 1 0.738811731590943 1 0.596035122871399 experiment 0.522376536818114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904840 chr19:58904820 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_36790 0 0 54 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr14 74424920 74424920 1 + C A STAD 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC CCATTTCCTATGGCCGAATCCAGCCCTTGGGTTCATATTAC < 41bp 1 0.497661153840606 1 0.150724023580551 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424920 nonsynonymous SNV 0.998 1 18 hm5C_associated_SNPs_36792 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:74424902-74424934
64251 chr1 193205392 193205392 1 + C T STAD 193205390 + 193205370 193205410 41 ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGTG ACTTTTCTACTTGTAGGGACCGTGTTGTAGCCGTTTTTGTG < 41bp 1 0.403956203743908 1 0.10509404540062 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC73 ENSG00000134371 CDS Human protein_coding chr1:193205390 chr1:193205392 synonymous SNV . 0 23 hm5C_associated_SNPs_36793 0 0 4 U2AF1 POSTAR2 ENCODE chr1:193205372-193205441
64251 chr19 36277956 36277956 1 + G T STAD 36277969 + 36277949 36277989 41 GCTCCGGGGAGCCCAGGGCCCACTCGGTGAGTCCTCAGCCT GCTCCGGTGAGCCCAGGGCCCACTCGGTGAGTCCTCAGCCT < 41bp 1 0.304094610600674 1 0.110170662403107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277969 chr19:36277956 stopgain 0.702 0 8 hm5C_associated_SNPs_36794 0 0 1 PPIG POSTAR2 ENCODE chr19:36277889-36277973
64251 chr12 110474086 110474086 1 + G A STAD 110474069 + 110474049 110474089 41 ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAAT ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCAAAT < 41bp 1 0.0350469760446668 1 0.0505074858665466 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110474069 chr12:110474086 nonsynonymous SNV 0.988 0 38 hm5C_associated_SNPs_36795 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:110474066-110474086
64251 chr16 72048403 72048403 1 + A G STAD 72048390 + 72048370 72048410 41 AGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAATCCAGTA AGGAAGTGAGAGTTCTGGGCCATAAATTCCGAAGTCCAGTA < 41bp 1 0.301102302880511 1 0.0599216222763062 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHODH ENSG00000102967 CDS Human protein_coding chr16:72048390 chr16:72048403 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_36796 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:72048394-72048414
64251 chr11 64802601 64802601 1 + C T STAD 64802597 + 64802577 64802617 41 TCCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGAC TCCTGCCACCCCCTCTGATCCCCATCCCGCCCCCTGATGAC < 41bp 1 0.146160847249748 1 0.0379718244075775 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802597 chr11:64802601 nonsynonymous SNV 0.889 2 25 hm5C_associated_SNPs_36797 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802601 64802601 1 + C T STAD 64802598 + 64802578 64802618 41 CCTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACC CCTGCCACCCCCTCTGATCCCCATCCCGCCCCCTGATGACC < 41bp 1 0.0372058046208349 1 0.0814820528030396 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802598 chr11:64802601 nonsynonymous SNV 0.889 2 24 hm5C_associated_SNPs_36798 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802601 64802601 1 + C T STAD 64802599 + 64802579 64802619 41 CTGCCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCC CTGCCACCCCCTCTGATCCCCATCCCGCCCCCTGATGACCC < 41bp 1 0.0776866834783444 1 0.0891011953353882 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802599 chr11:64802601 nonsynonymous SNV 0.889 2 23 hm5C_associated_SNPs_36799 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802601 64802601 1 + C T STAD 64802602 + 64802582 64802622 41 CCACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCG CCACCCCCTCTGATCCCCATCCCGCCCCCTGATGACCCCCG < 41bp 1 0.175615925437437 1 0.50740247964859 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802602 chr11:64802601 nonsynonymous SNV 0.889 2 20 hm5C_associated_SNPs_36800 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802601 64802601 1 + C T STAD 64802603 + 64802583 64802623 41 CACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGG CACCCCCTCTGATCCCCATCCCGCCCCCTGATGACCCCCGG < 41bp 1 0.155411117216497 1 0.769716262817383 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802603 chr11:64802601 nonsynonymous SNV 0.889 2 19 hm5C_associated_SNPs_36801 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr11 64802601 64802601 1 + C T STAD 64802604 + 64802584 64802624 41 ACCCCCTCTGATCCCCACCCCGCCCCCTGATGACCCCCGGC ACCCCCTCTGATCCCCATCCCGCCCCCTGATGACCCCCGGC < 41bp 1 0.316883512279928 1 0.364389538764954 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802604 chr11:64802601 nonsynonymous SNV 0.889 2 18 hm5C_associated_SNPs_36802 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:64802569-64802612
64251 chr21 46900409 46900409 1 + T C STAD 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTCCGGGGGCGATCTGGAGGCCCTGCGGGT < 41bp 1 0.0412321318565534 1 0.200352817773819 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900409 nonsynonymous SNV 0.010 3 14 hm5C_associated_SNPs_36803 0 0 6 FMR1 POSTAR2 ENCODE chr21:46900396-46900434
64251 chr19 17313032 17313032 1 + A G STAD 17313031 + 17313011 17313051 41 GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT GAGCGTGGCCAGAAGGACACCGACCTGGTCCTCAACCTCTT < 41bp 1 0.18253510254087 1 0.147749423980713 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17313031 chr19:17313032 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_36805 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:17313026-17313055
64251 chr9 80942970 80942970 1 + T C STAD 80942983 + 80942963 80943003 41 TCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAT TCAGTTGCCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAT < 41bp 1 0.378117213801163 1 0.318397402763367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80942983 chr9:80942970 synonymous SNV . 0 8 hm5C_associated_SNPs_36807 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80942930-80943008
64251 chr12 53776184 53776184 1 + C T STAD 53776180 + 53776160 53776200 41 TGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGA TGGTGGGCAGTATGTTGTGGCTGCTGCTCCCAACTTACAGA < 41bp 1 0.321745344500033 1 0.0398411154747009 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SP1 ENSG00000185591 CDS Human protein_coding chr12:53776180 chr12:53776184 synonymous SNV . 0 25 hm5C_associated_SNPs_36808 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:53776173-53776199
64251 chr10 102762432 102762432 1 + G A STAD 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCACCACCACG < 41bp 1 0.323726054072137 1 0.544558048248291 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762432 nonsynonymous SNV 0.525 0 33 hm5C_associated_SNPs_36809 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:102762432-102762465
64251 chr9 80858424 80858424 1 + G A STAD 80858436 + 80858416 80858456 41 GAGTCTTCGCTATAGGAGACCTGATCTTGACTGTATGGCTG GAGTCTTCACTATAGGAGACCTGATCTTGACTGTATGGCTG < 41bp 1 0.28616009869729 1 0.0687117278575897 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP78 ENSG00000148019 CDS Human protein_coding chr9:80858436 chr9:80858424 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_36810 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:80858375-80858457
64251 chr9 136217531 136217531 1 + G A STAD 136217530 + 136217510 136217550 41 AGGGAAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACC AGGGAAAGGCAAGACTGGGACATCTAGTCCACAGGAAGACC < 41bp 1 0.2043171759309 1 0.058914989233017 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136217530 chr9:136217531 nonsynonymous SNV 0.830 1 22 hm5C_associated_SNPs_36811 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:136217483-136217538
64251 chr20 34832791 34832791 1 + C T STAD 34832788 + 34832768 34832808 41 TACCACCAGCTTGGTGAGATCCCCGCTGACTTCTTCGTAGA TACCACCAGCTTGGTGAGATCCCTGCTGACTTCTTCGTAGA < 41bp 1 0.221163367524725 1 0.196328461170197 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AAR2 ENSG00000131043 CDS Human protein_coding chr20:34832788 chr20:34832791 synonymous SNV . 0 24 hm5C_associated_SNPs_36813 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34832725-34832794
64251 chr7 139107037 139107037 1 + G A STAD 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAA < 41bp 1 0.174055822783729 1 0.0564157366752625 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107037 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_36814 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107037 139107037 1 + G A STAD 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGCGGTCCTATGAGAGTGCTAATGGCAAATCAGAAGACA < 41bp 1 0.332044998719358 1 0.147506952285767 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107037 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_36815 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107037 139107037 1 + G A STAD 139107035 + 139107015 139107055 41 TCCTATGAGAGTGCTAATGGCAGATCAGAAGACAGGAGGAG TCCTATGAGAGTGCTAATGGCAAATCAGAAGACAGGAGGAG < 41bp 1 0.404547886869566 1 0.149049699306488 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107035 chr7:139107037 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_36816 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chrX 46918475 46918475 1 + G T STAD 46918487 + 46918467 46918507 41 AATGCAAAGGTGATTAGAAACTTCCAAGGATGACCCAACCT AATGCAAATGTGATTAGAAACTTCCAAGGATGACCCAACCT < 41bp 1 0.210897268617413 1 0.182652920484543 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient JADE3 ENSG00000102221 CDS Human protein_coding chrX:46918487 chrX:46918475 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_36817 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:46918443-46918475
64251 chr19 1043781 1043781 1 + A G STAD 1043784 + 1043764 1043804 41 TCCGGGAGGTGTGGGAGATGCTGGGACCCCGGATCTTCACC TCCGGGAGGTGTGGGAGGTGCTGGGACCCCGGATCTTCACC < 41bp 1 0.682794986227311 1 0.801156759262085 experiment 0.634410027545377 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043784 chr19:1043781 nonsynonymous SNV 0.056 1 18 hm5C_associated_SNPs_36818 0 0 2 DDX24 POSTAR2 ENCODE chr19:1043755-1043841
64251 chr22 29533623 29533623 1 + C T STAD 29533628 + 29533608 29533648 41 TATTTCTTCTCTGATCGCATCAATCAGGCCCAGGGATTTGC TATTTCTTCTCTGATTGCATCAATCAGGCCCAGGGATTTGC < 41bp 1 0.0328666881470819 1 0.0886226892471313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KREMEN1 ENSG00000183762 CDS Human protein_coding chr22:29533628 chr22:29533623 nonsynonymous SNV 0.995 3 16 hm5C_associated_SNPs_36819 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:29533608-29533634
64251 chr7 127342555 127342555 1 + T C STAD 127342535 + 127342515 127342555 41 AGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT AGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGC < 41bp 1 0.0514586289259078 1 0.181334525346756 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127342535 chr7:127342555 nonsynonymous SNV 0.844 1 41 hm5C_associated_SNPs_36820 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:127342542-127342577
64251 chr10 17276790 17276790 1 + C A STAD 17276805 + 17276785 17276825 41 CTCACCTGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC CTCACATGTGAAGTGGATGCCCTTAAAGGAACCGTGAGTAC < 41bp 1 0.156022105096373 1 0.0260064005851746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276805 chr10:17276790 synonymous SNV . 0 6 hm5C_associated_SNPs_36821 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:17276705-17276814
64251 chr1 109772108 109772108 1 + C T STAD 109772124 + 109772104 109772144 41 GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC GGAGTGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC < 41bp 1 0.580368939799791 1 0.815507650375366 experiment 0.839262120400418 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772124 chr1:109772108 nonsynonymous SNV 0.676 3 5 hm5C_associated_SNPs_36822 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109772102-109772128
64251 chr12 112229169 112229169 1 + C T STAD 112229155 + 112229135 112229175 41 ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATT ACATTGTGCCTGGATTTGGCCCCACGGCTGGGGCTGCCATT < 41bp 1 0.129692913290302 1 0.0247390568256378 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229155 chr12:112229169 synonymous SNV . 0 35 hm5C_associated_SNPs_36824 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229169 112229169 1 + C T STAD 112229156 + 112229136 112229176 41 CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTG CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCTGCCATTG < 41bp 1 0.291799333431436 1 0.134031236171722 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229156 chr12:112229169 synonymous SNV . 0 34 hm5C_associated_SNPs_36825 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229169 112229169 1 + C T STAD 112229157 + 112229137 112229177 41 ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTGC ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCTGCCATTGC < 41bp 1 0.745662470389809 1 0.379211664199829 experiment 0.508675059220382 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229157 chr12:112229169 synonymous SNV . 0 33 hm5C_associated_SNPs_36826 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chr12 112229169 112229169 1 + C T STAD 112229168 + 112229148 112229188 41 ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG ATTTGGCCCCACGGCTGGGGCTGCCATTGCCTCCCATGAGG < 41bp 1 0.388002625627335 1 0.0630034506320953 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229168 chr12:112229169 synonymous SNV . 0 22 hm5C_associated_SNPs_36827 0 0 5 FMR1 POSTAR2 ENCODE chr12:112229109-112229194
64251 chrX 70674047 70674047 1 + C T STAD 70674049 + 70674029 70674069 41 GTCAGTATACTAAGACTGCCCAGGAGATTGTGAACGTCTGT GTCAGTATACTAAGACTGTCCAGGAGATTGTGAACGTCTGT < 41bp 1 0.576809906321718 1 0.856076836585999 experiment 0.846380187356564 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF1 ENSG00000147133 CDS Human protein_coding chrX:70674049 chrX:70674047 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_36828 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:70674025-70674051
64251 chr9 134354732 134354732 1 + G A STAD 134354717 + 134354697 134354737 41 AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCT AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCATGCCT < 41bp 1 0.310168946124896 1 0.805463552474976 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354717 chr9:134354732 nonsynonymous SNV 0.192 0 36 hm5C_associated_SNPs_36829 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr9 134354732 134354732 1 + G A STAD 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGACCATGCCTGGCAGCAGCCTGGGCACTGAGATCTG < 41bp 1 0.232314845997431 1 0.317133665084839 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354732 nonsynonymous SNV 0.192 0 10 hm5C_associated_SNPs_36830 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr7 135291543 135291543 1 + A G STAD 135291549 + 135291529 135291569 41 TTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT TTCGTCATGAAACAGGAATCCACATCTTGAATCTTCTCATT < 41bp 1 0.216162007637552 1 0.0667721927165985 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291549 chr7:135291543 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_36833 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:135291508-135291546
64251 chr1 27089594 27089594 1 + T G STAD 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTAGGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT < 41bp 1 0.698701491398894 1 0.931355714797974 experiment 0.602597017202212 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089594 stopgain 0.976 1 7 hm5C_associated_SNPs_36834 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:27089566-27089606
64251 chr15 40259735 40259735 1 + G A STAD 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCCATCCCTGTGCATCAGCTTCACAGGTACACAGCT < 41bp 1 0.290672032374935 1 0.54388439655304 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259735 nonsynonymous SNV 0.922 3 28 hm5C_associated_SNPs_36835 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40259700-40259740
64251 chr17 8172066 8172066 1 + G T STAD 8172060 + 8172040 8172080 41 GCCTTCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCT GCCTTCTGCTACGCCACAACCTGTCTTGGCGCTACGAGTCT < 41bp 1 0.326870502107238 1 0.0533204078674316 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172060 chr17:8172066 nonsynonymous SNV 0.234 4 27 hm5C_associated_SNPs_36837 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8172060-8172080
64251 chr3 38524780 38524780 1 + C T STAD 38524770 + 38524750 38524790 41 CCTCGGACTGTCTCGTTTCCCTGGTGACCTCTGTCACCAAT CCTCGGACTGTCTCGTTTCCCTGGTGACCTTTGTCACCAAT < 41bp 1 0.769595446952506 1 0.349455982446671 experiment 0.460809106094988 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524770 chr3:38524780 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_36838 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr3:38524724-38524787
64251 chr19 39390817 39390817 1 + C G STAD 39390816 + 39390796 39390836 41 CCGGGGCTGTCGTGGGCTCCCCTCGTCTTCGGCTACGTCAC CCGGGGCTGTCGTGGGCTCCCGTCGTCTTCGGCTACGTCAC < 41bp 1 0.583598870735993 1 0.360470741987228 experiment 0.832802258528013 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39390816 chr19:39390817 nonsynonymous SNV 0.982 1 22 hm5C_associated_SNPs_36841 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39390805-39390833
64251 chr12 56214131 56214131 1 + G C STAD 56214120 + 56214100 56214140 41 CAGCCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAG CAGCCTCATTGCTAAGTGTACTGCTGCCGAACTTGCCCCAG < 41bp 1 0.683597328524526 1 0.248014628887177 experiment 0.632805342950948 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214120 chr12:56214131 nonsynonymous SNV 0.990 2 32 hm5C_associated_SNPs_36842 0 0 1 SND1 POSTAR2 ENCODE chr12:56214130-56214204
64251 chr12 56214131 56214131 1 + G C STAD 56214123 + 56214103 56214143 41 CCTCATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTC CCTCATTGCTAAGTGTACTGCTGCCGAACTTGCCCCAGTTC < 41bp 1 0.583282169435409 1 0.298034608364105 experiment 0.833435661129181 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214123 chr12:56214131 nonsynonymous SNV 0.990 2 29 hm5C_associated_SNPs_36843 0 0 1 SND1 POSTAR2 ENCODE chr12:56214130-56214204
64251 chr1 110586377 110586377 1 + G A STAD 110586381 + 110586361 110586401 41 GTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG GTCTGGAGGGGGAGACATTTCCCCTGGAACGGGATGAAGTG < 41bp 1 0.705843850514042 1 0.321706116199493 experiment 0.588312298971917 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586381 chr1:110586377 synonymous SNV . 0 17 hm5C_associated_SNPs_36844 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110586324-110586382
64251 chr20 49576176 49576176 1 + G T STAD 49576184 + 49576164 49576204 41 AAATCGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG AAATCGCTGCGGTTCTGGGCCCCTCTTACAGTGGCAGCTTG < 41bp 1 0.117729024833013 1 0.0851042568683624 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576184 chr20:49576176 nonsynonymous SNV 0.204 2 13 hm5C_associated_SNPs_36845 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:49576162-49576193
64251 chr16 85691162 85691162 1 + G A STAD 85691160 + 85691140 85691180 41 GAGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGA GAGCAGCACCTGGATATGGGCCAGCCCCCGGTGCCGGCGGA < 41bp 1 0.229843043806994 1 0.352977961301804 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691160 chr16:85691162 nonsynonymous SNV 0.943 4 23 hm5C_associated_SNPs_36846 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691162 85691162 1 + G A STAD 85691161 + 85691141 85691181 41 AGCAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAG AGCAGCACCTGGATATGGGCCAGCCCCCGGTGCCGGCGGAG < 41bp 1 0.296699997280951 1 0.27364307641983 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691161 chr16:85691162 nonsynonymous SNV 0.943 4 22 hm5C_associated_SNPs_36847 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691162 85691162 1 + G A STAD 85691167 + 85691147 85691187 41 ACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAG ACCTGGATATGGGCCAGCCCCCGGTGCCGGCGGAGGCAGAG < 41bp 1 0.509466948000069 1 0.429136097431183 experiment 0.981066103999861 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691167 chr16:85691162 nonsynonymous SNV 0.943 4 16 hm5C_associated_SNPs_36848 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chr16 85691162 85691162 1 + G A STAD 85691173 + 85691153 85691193 41 ATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGG ATATGGGCCAGCCCCCGGTGCCGGCGGAGGCAGAGCACAGG < 41bp 1 0.21396097948308 1 0.531339347362518 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691173 chr16:85691162 nonsynonymous SNV 0.943 4 10 hm5C_associated_SNPs_36849 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:85691140-85691169
64251 chrX 48759692 48759692 1 + C T STAD 48759703 + 48759683 48759723 41 GACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGA GACAGGGAATGGGATCGGGACCGCGGGTATGACAAGGCAGA < 41bp 1 0.476536660502594 1 0.126916766166687 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759703 chrX:48759692 nonsynonymous SNV 0.992 4 10 hm5C_associated_SNPs_36857 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr15 91492615 91492615 1 + T A STAD 91492607 + 91492587 91492627 41 GGCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGA GGCAGCGGGTGTGGTGTCGGCCATGGTGAGCATGGTGAAGA < 41bp 1 0.27846471455777 1 0.407841920852661 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492607 chr15:91492615 nonsynonymous SNV 0.925 3 29 hm5C_associated_SNPs_36859 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr15:91492600-91492620
64251 chr15 91492615 91492615 1 + T A STAD 91492608 + 91492588 91492628 41 GCAGCGGGTGTGGTGTCGGCCATGGTGTGCATGGTGAAGAC GCAGCGGGTGTGGTGTCGGCCATGGTGAGCATGGTGAAGAC < 41bp 1 0.686204969488046 1 0.368232280015945 experiment 0.627590061023907 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492608 chr15:91492615 nonsynonymous SNV 0.925 3 28 hm5C_associated_SNPs_36860 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr15:91492600-91492620
64251 chr4 53579527 53579527 1 + G C STAD 53579508 + 53579488 53579528 41 AGAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGGA AGAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGCA < 41bp 1 0.0846827187924015 1 0.042996734380722 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579508 chr4:53579527 . . 0 40 hm5C_associated_SNPs_36863 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579527 53579527 1 + G C STAD 53579509 + 53579489 53579529 41 GAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGGAG GAGAAGAGACTGGAAAGCTCCTCTTTGGATCCTGTCTGCAG < 41bp 1 0.260351012357107 1 0.130088567733765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579509 chr4:53579527 . . 0 39 hm5C_associated_SNPs_36864 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579527 53579527 1 + G C STAD 53579519 + 53579499 53579539 41 TGGAAAGCTCCTCTTTGGATCCTGTCTGGAGTCACAACTGA TGGAAAGCTCCTCTTTGGATCCTGTCTGCAGTCACAACTGA < 41bp 1 0.073943721638046 1 0.198455214500427 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579519 chr4:53579527 . . 0 29 hm5C_associated_SNPs_36865 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579527 53579527 1 + G C STAD 53579520 + 53579500 53579540 41 GGAAAGCTCCTCTTTGGATCCTGTCTGGAGTCACAACTGAA GGAAAGCTCCTCTTTGGATCCTGTCTGCAGTCACAACTGAA < 41bp 1 0.0982159299131185 1 0.0695280730724335 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579520 chr4:53579527 . . 0 28 hm5C_associated_SNPs_36866 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579527 53579527 1 + G C STAD 53579531 + 53579511 53579551 41 CTTTGGATCCTGTCTGGAGTCACAACTGAACCAGAAAAAGT CTTTGGATCCTGTCTGCAGTCACAACTGAACCAGAAAAAGT < 41bp 1 0.53910391307555 1 0.549319505691528 experiment 0.921792173848901 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579531 chr4:53579527 . . 0 17 hm5C_associated_SNPs_36867 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr4 53579527 53579527 1 + G C STAD 53579536 + 53579516 53579556 41 GATCCTGTCTGGAGTCACAACTGAACCAGAAAAAGTTTCGT GATCCTGTCTGCAGTCACAACTGAACCAGAAAAAGTTTCGT < 41bp 1 0.472462409511551 1 0.619613289833069 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579536 chr4:53579527 . . 0 12 hm5C_associated_SNPs_36868 0 0 11 FBL POSTAR2 GSE43666,GSM1067865 chr4:53579500-53579536
64251 chr11 121495981 121495981 1 + G C STAD 121495977 + 121495957 121495997 41 CCATCCTGCTGTACGATGAGCTGGGGTCTGGTGAGTTGCGA CCATCCTGCTGTACGATGAGCTGGCGTCTGGTGAGTTGCGA < 41bp 1 0.232803917005116 1 0.410730004310608 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SORL1 ENSG00000137642 CDS Human protein_coding chr11:121495977 chr11:121495981 nonsynonymous SNV 0.836 1 25 hm5C_associated_SNPs_36869 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:121495887-121495993
64251 chr10 17276730 17276730 1 + C T STAD 17276740 + 17276720 17276760 41 GGAACAATGACGCCCTGCGCCAGGCAAAGCAGGAGTCCACT GGAACAATGATGCCCTGCGCCAGGCAAAGCAGGAGTCCACT < 41bp 1 0.478053762394086 1 0.750745415687561 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17276740 chr10:17276730 synonymous SNV . 0 11 hm5C_associated_SNPs_36871 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr10:17276691-17276742
64251 chr5 14359545 14359545 1 + G A STAD 14359530 + 14359510 14359550 41 TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACAAGGCG < 41bp 1 0.319552550140467 1 0.502311944961548 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359530 chr5:14359545 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_36872 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359545 14359545 1 + G A STAD 14359551 + 14359531 14359571 41 TGCAGCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTC TGCAGCAGCTGGACAAGGCGCAGTCGCAGATGGAGGAGCTC < 41bp 1 0.0580766545185817 1 0.15431135892868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359551 chr5:14359545 nonsynonymous SNV 0.999 3 15 hm5C_associated_SNPs_36873 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359545 14359545 1 + G A STAD 14359555 + 14359535 14359575 41 GCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTTCC GCAGCTGGACAAGGCGCAGTCGCAGATGGAGGAGCTCTTCC < 41bp 1 0.569890157944605 1 0.853487133979797 experiment 0.860219684110791 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359555 chr5:14359545 nonsynonymous SNV 0.999 3 11 hm5C_associated_SNPs_36874 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr6 31594956 31594956 1 + G T STAD 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGTCCC < 41bp 1 0.286898695387093 1 0.0903161466121674 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594956 nonsynonymous SNV 0.969 4 38 hm5C_associated_SNPs_36876 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGTCCCC < 41bp 1 0.26321927472375 1 0.0894670188426971 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594956 nonsynonymous SNV 0.969 4 37 hm5C_associated_SNPs_36877 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGTCCCCC < 41bp 1 0.31826323713161 1 0.134056210517883 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594956 nonsynonymous SNV 0.969 4 36 hm5C_associated_SNPs_36878 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGTCCCCCC < 41bp 1 0.584399526230048 1 0.625944316387177 experiment 0.831200947539904 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594956 nonsynonymous SNV 0.969 4 35 hm5C_associated_SNPs_36879 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594957 + 31594937 31594977 41 GGCCCCGCCGGGAACTGGGGCCCCCCTGGGGACTACCCAGT GGCCCCGCCGGGAACTGGGTCCCCCCTGGGGACTACCCAGT < 41bp 1 0.251670105450499 1 0.0429392457008362 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594957 chr6:31594956 nonsynonymous SNV 0.969 4 20 hm5C_associated_SNPs_36880 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594958 + 31594938 31594978 41 GCCCCGCCGGGAACTGGGGCCCCCCTGGGGACTACCCAGTG GCCCCGCCGGGAACTGGGTCCCCCCTGGGGACTACCCAGTG < 41bp 1 0.271217077260631 1 0.255046606063843 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594958 chr6:31594956 nonsynonymous SNV 0.969 4 19 hm5C_associated_SNPs_36881 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594959 + 31594939 31594979 41 CCCCGCCGGGAACTGGGGCCCCCCTGGGGACTACCCAGTGA CCCCGCCGGGAACTGGGTCCCCCCTGGGGACTACCCAGTGA < 41bp 1 0.376823095317178 1 0.128459751605988 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594959 chr6:31594956 nonsynonymous SNV 0.969 4 18 hm5C_associated_SNPs_36882 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr6 31594956 31594956 1 + G T STAD 31594960 + 31594940 31594980 41 CCCGCCGGGAACTGGGGCCCCCCTGGGGACTACCCAGTGAG CCCGCCGGGAACTGGGTCCCCCCTGGGGACTACCCAGTGAG < 41bp 1 0.374590152979697 1 0.361474633216858 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594960 chr6:31594956 nonsynonymous SNV 0.969 4 17 hm5C_associated_SNPs_36883 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:31594940-31594960
64251 chr7 114302139 114302139 1 + T G STAD 114302124 + 114302104 114302144 41 CTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCTTAGCC CTTCTGTCTGCTTTAGAATGCAGTACGTCATAATCGTAGCC < 41bp 1 0.238623804380077 1 0.32318526506424 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXP2 ENSG00000128573 CDS Human protein_coding chr7:114302124 chr7:114302139 nonsynonymous SNV 0.998 5 36 hm5C_associated_SNPs_36888 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:114302130-114302142
64251 chr1 180012316 180012316 1 + T G STAD 180012302 + 180012282 180012322 41 TTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAACA TTCCAGACTTTGTGAAACAGCTGAGGACCAGAACGGAAACA < 41bp 1 0.441917634411367 1 0.137040197849274 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180012302 chr1:180012316 synonymous SNV . 0 35 hm5C_associated_SNPs_36889 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:180012285-180012317
64251 chr2 69379379 69379379 1 + C T STAD 69379375 + 69379355 69379395 41 CTGGCTCTCCTCTGGTGGTTCTGGCCCCTCTGCTGCACTGT CTGGCTCTCCTCTGGTGGTTCTGGTCCCTCTGCTGCACTGT < 41bp 1 0.512855861347567 1 0.648356080055237 experiment 0.974288277304867 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANTXR1 ENSG00000169604 CDS Human protein_coding chr2:69379375 chr2:69379379 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_36892 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:69379352-69379394
64251 chrX 152958731 152958731 1 + C T STAD 152958738 + 152958718 152958758 41 GTGTGGATAGATGCGGGGACCCAGATTTTCTTTTCTTACGC GTGTGGATAGATGTGGGGACCCAGATTTTCTTTTCTTACGC < 41bp 1 0.587735613192765 1 0.263620376586914 experiment 0.824528773614469 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958738 chrX:152958731 nonsynonymous SNV 0.984 4 14 hm5C_associated_SNPs_36893 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152958722-152958757
64251 chr3 183435470 183435470 1 + T C STAD 183435490 + 183435470 183435510 41 TATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG CATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG < 41bp 1 0.0550548873454959 1 0.0755000412464142 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183435490 chr3:183435470 synonymous SNV . 0 1 hm5C_associated_SNPs_36895 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183435441-183435528
64251 chr6 139487472 139487472 1 + T C STAD 139487463 + 139487443 139487483 41 GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACG GATCTGCAGCTTCGGTAGGCCGGTGGACCCGGAGAAGGACG < 41bp 1 0.607476083986527 1 0.579801857471466 experiment 0.785047832026947 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139487463 chr6:139487472 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_36896 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr6:139487430-139487473
64251 chr12 7043403 7043403 1 + G A STAD 7043404 + 7043384 7043424 41 GAAGAACTGAGATCGAGGGGCCGGGCCTCCCCTGGAGGGGT GAAGAACTGAGATCGAGGGACCGGGCCTCCCCTGGAGGGGT < 41bp 1 0.311884117106932 1 0.571965873241425 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ATN1 ENSG00000111676 CDS Human protein_coding chr12:7043404 chr12:7043403 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_36897 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr12:7043387-7043417
64251 chr1 215785250 215785250 1 + T C STAD 215785244 + 215785224 215785264 41 CCAACAAACTATTTGTAAGACTCTCATCGACTGGAAAAAGG CCAACAAACTATTTGTAAGACTCTCACCGACTGGAAAAAGG < 41bp 1 0.0946874041305421 1 0.0385651588439941 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215785244 chr1:215785250 nonsynonymous SNV 0.983 4 27 hm5C_associated_SNPs_36898 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:215785239-215785259
64251 chr12 6637435 6637435 1 + G A STAD 6637450 + 6637430 6637470 41 ACTGGGGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC ACTGGAGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC < 41bp 1 0.0951994807566923 1 0.0820887088775635 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637450 chr12:6637435 synonymous SNV . 0 6 hm5C_associated_SNPs_36899 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:6637390-6637461
64251 chr19 5691598 5691598 1 + C T STAD 5691613 + 5691593 5691633 41 ACTGGCCGCCATGAGGAAAGCTGCTGCCAAGAAAGACTGAG ACTGGTCGCCATGAGGAAAGCTGCTGCCAAGAAAGACTGAG < 41bp 1 0.657235421292023 1 0.506915509700775 experiment 0.685529157415955 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPL36 ENSG00000130255 CDS Human protein_coding chr19:5691613 chr19:5691598 nonsynonymous SNV 0.013 0 6 hm5C_associated_SNPs_36900 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:5691541-5691605
64251 chr17 39974715 39974715 1 + G A STAD 39974698 + 39974678 39974718 41 GGCTGATCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGT GGCTGATCAAGGGCATGGACCAGGGGCTGCTGGGCATATGT < 41bp 1 0.691467264591835 1 0.928051352500916 experiment 0.61706547081633 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974698 chr17:39974715 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_36906 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr17 39974715 39974715 1 + G A STAD 39974704 + 39974684 39974724 41 TCAAGGGCATGGACCAGGGGCTGCTGGGCATGTGTCCTGGA TCAAGGGCATGGACCAGGGGCTGCTGGGCATATGTCCTGGA < 41bp 1 0.28335160049538 1 0.0389918386936188 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974704 chr17:39974715 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_36907 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr17 39974715 39974715 1 + G A STAD 39974712 + 39974692 39974732 41 ATGGACCAGGGGCTGCTGGGCATGTGTCCTGGAGAGAGAAG ATGGACCAGGGGCTGCTGGGCATATGTCCTGGAGAGAGAAG < 41bp 1 0.103089754419769 1 0.319764792919159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FKBP10 ENSG00000141756 CDS Human protein_coding chr17:39974712 chr17:39974715 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_36908 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:39974685-39974725
64251 chr1 26135604 26135604 1 + A G STAD 26135615 + 26135595 26135635 41 GCCTGCCTGACTGCCATCAGCGACTTCTACTACACTGTGAT GCCTGCCTGGCTGCCATCAGCGACTTCTACTACACTGTGAT < 41bp 1 0.29019246976883 1 0.237112581729889 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26135615 chr1:26135604 nonsynonymous SNV 0.897 2 10 hm5C_associated_SNPs_36909 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:26135572-26135604
64251 chr11 988613 988613 1 + G A STAD 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCAC < 41bp 1 0.732077129985069 1 0.517643213272095 experiment 0.535845740029863 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988613 nonsynonymous SNV 0.995 1 40 hm5C_associated_SNPs_36910 0 0 6 BUD13 POSTAR2 ENCODE chr11:988519-988630
64251 chr19 58906110 58906110 1 + A G STAD 58906094 + 58906074 58906114 41 AGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGC AGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAGCCGC < 41bp 1 0.706989608447854 1 0.419643133878708 experiment 0.586020783104292 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906094 chr19:58906110 nonsynonymous SNV 0.994 4 37 hm5C_associated_SNPs_36913 0 0 49 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906110 58906110 1 + A G STAD 58906102 + 58906082 58906122 41 GACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTC GACGAGCTGGAGCGTGTGGCCAAGTCCAGCCGCTGATTTTC < 41bp 1 0.642355038622187 1 0.415343701839447 experiment 0.715289922755627 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906102 chr19:58906110 nonsynonymous SNV 0.994 4 29 hm5C_associated_SNPs_36914 0 0 49 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906110 58906110 1 + A G STAD 58906107 + 58906087 58906127 41 GCTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTCCCAGC GCTGGAGCGTGTGGCCAAGTCCAGCCGCTGATTTTCCCAGC < 41bp 1 0.57210201491081 1 0.521935045719147 experiment 0.85579597017838 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906107 chr19:58906110 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_36915 0 0 49 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr19 58906110 58906110 1 + A G STAD 58906108 + 58906088 58906128 41 CTGGAGCGTGTGGCCAAGTCCAACCGCTGATTTTCCCAGCT CTGGAGCGTGTGGCCAAGTCCAGCCGCTGATTTTCCCAGCT < 41bp 1 0.544949986332979 1 0.278288215398788 experiment 0.910100027334042 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906108 chr19:58906110 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_36916 0 0 49 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr17 18143909 18143909 1 + A G STAD 18143895 + 18143875 18143915 41 GCGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGT GCGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCGCCATGT < 41bp 1 0.0413192813434238 1 0.123263984918594 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143895 chr17:18143909 nonsynonymous SNV 0.953 4 35 hm5C_associated_SNPs_36917 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143909 18143909 1 + A G STAD 18143896 + 18143876 18143916 41 CGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGTG CGCTTGTTTTCTGCAGGGGCCCACCACGGGCCCGCCATGTG < 41bp 1 0.0527621369963035 1 0.0463764667510986 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143896 chr17:18143909 nonsynonymous SNV 0.953 4 34 hm5C_associated_SNPs_36918 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143909 18143909 1 + A G STAD 18143897 + 18143877 18143917 41 GCTTGTTTTCTGCAGGGGCCCACCACGGGCCCACCATGTGG GCTTGTTTTCTGCAGGGGCCCACCACGGGCCCGCCATGTGG < 41bp 1 0.742835854699394 1 0.405979245901108 experiment 0.514328290601213 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143897 chr17:18143909 nonsynonymous SNV 0.953 4 33 hm5C_associated_SNPs_36919 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143909 18143909 1 + A G STAD 18143906 + 18143886 18143926 41 CTGCAGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACC CTGCAGGGGCCCACCACGGGCCCGCCATGTGGGCTGGCACC < 41bp 1 0.0992991851231298 1 0.0819941163063049 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143906 chr17:18143909 nonsynonymous SNV 0.953 4 24 hm5C_associated_SNPs_36920 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr17 18143909 18143909 1 + A G STAD 18143907 + 18143887 18143927 41 TGCAGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCA TGCAGGGGCCCACCACGGGCCCGCCATGTGGGCTGGCACCA < 41bp 1 0.120156222530993 1 0.119686812162399 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143907 chr17:18143909 nonsynonymous SNV 0.953 4 23 hm5C_associated_SNPs_36921 0 0 2 FXR2 POSTAR2 ENCODE chr17:18143894-18143948
64251 chr14 61346478 61346478 1 + T C STAD 61346465 + 61346445 61346485 41 CACTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA CACTGGCACCTATTCACAAGCTTGAAGAAGCTCCGTATGAA < 41bp 1 0.619394439752875 1 0.526323616504669 experiment 0.761211120494249 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346465 chr14:61346478 nonsynonymous SNV 0.996 1 34 hm5C_associated_SNPs_36924 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:61346457-61346482
64251 chr2 227729830 227729830 1 + G A STAD 227729840 + 227729820 227729860 41 GAGCTGTGCTGTAGGTTTCTCAGGTAAGGGAGACAAAATTT GAGCTGTGCTATAGGTTTCTCAGGTAAGGGAGACAAAATTT < 41bp 1 0.676010134400929 1 0.493662774562836 experiment 0.647979731198142 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RHBDD1 ENSG00000144468 CDS Human protein_coding chr2:227729840 chr2:227729830 nonsynonymous SNV 0.971 1 11 hm5C_associated_SNPs_36925 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:227729795-227729833
64251 chr7 135333207 135333207 1 + A T STAD 135333200 + 135333180 135333220 41 GAGAATCACTACAAAAGAAACTTCTGGACATTGAAGGATTA GAGAATCACTACAAAAGAAACTTCTGGTCATTGAAGGATTA < 41bp 1 0.0647260782083815 1 0.0927473604679108 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135333200 chr7:135333207 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_36926 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:135333165-135333259
64251 chr11 598394 598394 1 + T A STAD 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG GACTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG < 41bp 1 0.113836743680474 1 0.373584508895874 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598394 nonsynonymous SNV 0.154 3 2 hm5C_associated_SNPs_36927 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:598374-598412
64251 chr9 100425241 100425241 1 + A G STAD 100425251 + 100425231 100425271 41 AAAAGGTTTCATGAAGTCTTCAAAACCCTAGCTGAAAGTGA AAAAGGTTTCGTGAAGTCTTCAAAACCCTAGCTGAAAGTGA < 41bp 1 0.274630448154106 1 0.727594912052155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100425251 chr9:100425241 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_36928 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr9:100425224-100425245
64251 chr5 134130617 134130617 1 + G T STAD 134130604 + 134130584 134130624 41 TATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGG TATGTTTTCAGCTACTTTCCCCAGAGCTATGGATGCTTTGG < 41bp 1 0.666522731660557 1 0.741197645664215 experiment 0.666954536678885 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130604 chr5:134130617 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_36929 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:134130609-134130639
64251 chr5 134130617 134130617 1 + G T STAD 134130605 + 134130585 134130625 41 ATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGGC ATGTTTTCAGCTACTTTCCCCAGAGCTATGGATGCTTTGGC < 41bp 1 0.409074325950761 1 0.293816983699799 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130605 chr5:134130617 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_36930 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:134130609-134130639
64251 chr14 96998729 96998729 1 + T C STAD 96998728 + 96998708 96998748 41 CATTGACAACTTCAGGTTAACTCTGAGAGCTATCAAACTAT CATTGACAACTTCAGGTTAACCCTGAGAGCTATCAAACTAT < 41bp 1 0.277209819505424 1 0.0395649969577789 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96998728 chr14:96998729 synonymous SNV . 0 22 hm5C_associated_SNPs_36931 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:96998689-96998753
64251 chr15 69747800 69747800 1 + A G STAD 69747788 + 69747768 69747808 41 TGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCCGAGG TGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGGATCCGAGG < 41bp 1 0.462281660590527 1 0.780125498771667 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747788 chr15:69747800 nonsynonymous SNV 0.990 3 33 hm5C_associated_SNPs_36932 0 0 78 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:69747760-69747800
64251 chr15 69747800 69747800 1 + A G STAD 69747803 + 69747783 69747823 41 GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA GGAAGCAAAGAAAGAAGGATCCGAGGAGTCTGATGATGACA < 41bp 1 0.258568512297771 1 0.229977369308472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747803 chr15:69747800 nonsynonymous SNV 0.990 3 18 hm5C_associated_SNPs_36933 0 0 78 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:69747760-69747800
64251 chr6 109484127 109484127 1 + A G STAD 109484132 + 109484112 109484152 41 CAATACGAGTTCATAATCTTCAAATGAAATTGAGAAGAGAT CAATACGAGTTCATAGTCTTCAAATGAAATTGAGAAGAGAT < 41bp 1 0.251885500395025 1 0.309425473213196 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP57L1 ENSG00000183137 CDS Human protein_coding chr6:109484132 chr6:109484127 nonsynonymous SNV 0.945 0 16 hm5C_associated_SNPs_36934 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:109484126-109484127
64251 chr1 44056821 44056821 1 + T C STAD 44056839 + 44056819 44056859 41 ATTGGCGGCCTCAGCCCTTTCTCGGAATATGCCTTCCGCGT ATCGGCGGCCTCAGCCCTTTCTCGGAATATGCCTTCCGCGT < 41bp 1 0.792512236710762 1 0.805192351341248 experiment 0.414975526578477 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44056839 chr1:44056821 synonymous SNV . 0 3 hm5C_associated_SNPs_36935 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:44056817-44056842
64251 chr4 146468016 146468016 1 + C T STAD 146468006 + 146467986 146468026 41 TCCAACAATAAGAACCGTTTCTGCCTTGGGCTGCTCTCCAA TCCAACAATAAGAACCGTTTCTGCCTTGGGTTGCTCTCCAA < 41bp 1 0.651316176840625 1 0.106463700532913 experiment 0.69736764631875 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146468006 chr4:146468016 synonymous SNV . 0 31 hm5C_associated_SNPs_36936 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:146467997-146468022
64251 chr8 26505247 26505247 1 + A T STAD 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCCGCATTGCTGTGGGTTCCGATGCCGACCTGGTCATCT < 41bp 1 0.16693043684194 1 0.0508511960506439 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505247 synonymous SNV . 0 19 hm5C_associated_SNPs_36937 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505227-26505251
64251 chr7 91708815 91708815 1 + T A STAD 91708830 + 91708810 91708850 41 ATAGATCATCTGAGCAAAGACAAACCTGAACTAGAAGTAGT ATAGAACATCTGAGCAAAGACAAACCTGAACTAGAAGTAGT < 41bp 1 0.0716136432005086 1 0.31638690829277 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91708830 chr7:91708815 nonsynonymous SNV 0.094 0 6 hm5C_associated_SNPs_36938 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:91708782-91708824
64251 chr22 21288079 21288079 1 + A T STAD 21288090 + 21288070 21288110 41 TCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGC TCCAAGCCCTCCAATGGGATCTGTCTCAGCACCCAACCTGC < 41bp 1 0.115164886831233 1 0.169505476951599 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21288090 chr22:21288079 synonymous SNV . 0 10 hm5C_associated_SNPs_36940 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:21288073-21288107
64251 chr22 21288079 21288079 1 + A T STAD 21288099 + 21288079 21288119 41 ACCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAGCAG TCCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAGCAG < 41bp 1 0.324956166987337 1 0.304866909980774 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21288099 chr22:21288079 synonymous SNV . 0 1 hm5C_associated_SNPs_36941 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:21288073-21288107
64251 chr14 100367326 100367326 1 + G T STAD 100367316 + 100367296 100367336 41 TCTGTGACATTGAATACTCTCCACGTCATTGGAATAGGTTT TCTGTGACATTGAATACTCTCCACGTCATTTGAATAGGTTT < 41bp 1 0.200043114921459 1 0.519323348999023 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML1 ENSG00000066629 CDS Human protein_coding chr14:100367316 chr14:100367326 stopgain 0.981 1 31 hm5C_associated_SNPs_36942 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:100367310-100367335
64251 chr11 71946494 71946494 1 + C T STAD 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTATGG < 41bp 1 0.375640587709472 1 0.0293405950069427 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946494 synonymous SNV . 0 39 hm5C_associated_SNPs_36943 0 0 1 PRPF8 POSTAR2 ENCODE chr11:71946493-71946521
64251 chr11 71946494 71946494 1 + C T STAD 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTATGGTG < 41bp 1 0.323997836748546 1 0.0983560979366302 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946494 synonymous SNV . 0 37 hm5C_associated_SNPs_36944 0 0 1 PRPF8 POSTAR2 ENCODE chr11:71946493-71946521
64251 chr11 71946494 71946494 1 + C T STAD 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTATGGTGG < 41bp 1 0.158951017330014 1 0.478678941726685 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946494 synonymous SNV . 0 36 hm5C_associated_SNPs_36945 0 0 1 PRPF8 POSTAR2 ENCODE chr11:71946493-71946521
64251 chr11 71946494 71946494 1 + C T STAD 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTATGGTGGG < 41bp 1 0.748887811883654 1 0.581266224384308 experiment 0.502224376232692 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946494 synonymous SNV . 0 35 hm5C_associated_SNPs_36946 0 0 1 PRPF8 POSTAR2 ENCODE chr11:71946493-71946521
64251 chr18 51887090 51887090 1 + C T STAD 51887099 + 51887079 51887119 41 GATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTT GATCTGCTTCTTAAGCTCTACAGGCTTATATTGATGATTTT < 41bp 1 0.435795073764703 1 0.716485619544983 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C18orf54 ENSG00000166845 CDS Human protein_coding chr18:51887099 chr18:51887090 stopgain 0.893 0 12 hm5C_associated_SNPs_36947 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:51887077-51887130
64251 chr1 118477161 118477161 1 + C T STAD 118477159 + 118477139 118477179 41 GCCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAG GCCCCTCCCCAGATGGGCTACATTTAGCTGTTGGGTATGAG < 41bp 1 0.0537510801201146 1 0.0220582187175751 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WDR3 ENSG00000065183 CDS Human protein_coding chr1:118477159 chr1:118477161 synonymous SNV . 0 23 hm5C_associated_SNPs_36948 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:118477151-118477173
64251 chr22 24459471 24459471 1 + T C STAD 24459479 + 24459459 24459499 41 CAGATTTGGACCTGACTTCCCAGGGACCCACTGCCTGGGTG CAGATTTGGACCCGACTTCCCAGGGACCCACTGCCTGGGTG < 41bp 1 0.72267422814784 1 0.916499674320221 experiment 0.554651543704321 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24459479 chr22:24459471 synonymous SNV . 0 13 hm5C_associated_SNPs_36949 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr22:24459454-24459487
64251 chr20 32660018 32660018 1 + C A STAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGACGTGT < 41bp 1 0.143979380686767 1 0.0599859058856964 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32660018 synonymous SNV . 0 36 hm5C_associated_SNPs_36951 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:32659997-32660020
64251 chr5 131976465 131976465 1 + A G STAD 131976460 + 131976440 131976480 41 AGCCAACAACAAATCTTGACCGAGAAAACATTGAATCTCTT AGCCAACAACAAATCTTGACCGAGAGAACATTGAATCTCTT < 41bp 1 0.700879229954169 1 0.624079883098602 experiment 0.598241540091663 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131976460 chr5:131976465 synonymous SNV . 0 26 hm5C_associated_SNPs_36952 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131976416-131976492
64251 chrX 135593206 135593206 1 + A T STAD 135593205 + 135593185 135593225 41 TGAGAAGAAGTTTGAAAAGACAGAAGATGGGGGAGAATTTG TGAGAAGAAGTTTGAAAAGACTGAAGATGGGGGAGAATTTG < 41bp 1 0.658570844156173 1 0.240647584199905 experiment 0.682858311687653 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593205 chrX:135593206 synonymous SNV . 0 22 hm5C_associated_SNPs_36953 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:135593156-135593246
64251 chr9 109689817 109689817 1 + A G STAD 109689820 + 109689800 109689840 41 CGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA CGGACGGTCAAAGGGGTGCTCATTCATTATCAGAAGAAGCA < 41bp 1 0.0180914320689186 1 0.0910272300243378 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109689820 chr9:109689817 synonymous SNV . 0 18 hm5C_associated_SNPs_36954 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:109689796-109689820
64251 chr19 1278978 1278978 1 + C T STAD 1278968 + 1278948 1278988 41 GACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCT GACCTGTTGCCACCTGCACCCACCGCTGGATCATGCAGCCT < 41bp 1 0.664773723840755 1 0.0836685597896576 experiment 0.670452552318489 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278968 chr19:1278978 nonsynonymous SNV 0.002 0 31 hm5C_associated_SNPs_36955 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1278926-1278978
64251 chr12 58109590 58109590 1 + C T STAD 58109596 + 58109576 58109616 41 GACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA GACTACATCGATCGTGTGGACGAGCCCTTGTCCTGCTCTTA < 41bp 1 0.438966852805396 1 0.46274870634079 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109596 chr12:58109590 synonymous SNV . 0 15 hm5C_associated_SNPs_36956 0 0 8 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr12 58109590 58109590 1 + C T STAD 58109602 + 58109582 58109622 41 ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT ATCGATCGTGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT < 41bp 1 0.401407740976751 1 0.0412681102752686 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OS9 ENSG00000135506 CDS Human protein_coding chr12:58109602 chr12:58109590 synonymous SNV . 0 9 hm5C_associated_SNPs_36957 0 0 8 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr11 119205959 119205959 1 + G A STAD 119205950 + 119205930 119205970 41 TGGCTTCCCTGGCCTGGCTCCTGGCCTTCGTCTACAACCTG TGGCTTCCCTGGCCTGGCTCCTGGCCTTCATCTACAACCTG < 41bp 1 0.450567692043532 1 0.412740588188171 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF26 ENSG00000173456 CDS Human protein_coding chr11:119205950 chr11:119205959 nonsynonymous SNV 0.998 0 30 hm5C_associated_SNPs_36958 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:119205940-119205960
64251 chr17 37359273 37359273 1 + G T STAD 37359287 + 37359267 37359307 41 CCGAATGCCAGAGAAGGTCACATGGATGAGGAGAATGAGGA CCGAATTCCAGAGAAGGTCACATGGATGAGGAGAATGAGGA < 41bp 1 0.433724196089659 1 0.290698826313019 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359287 chr17:37359273 nonsynonymous SNV 0.990 2 7 hm5C_associated_SNPs_36959 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:37359260-37359280
64251 chr4 119631225 119631225 1 + C T STAD 119631220 + 119631200 119631240 41 GAAACATATGCATCCTATTTCAGTGCTCCTAATTCCTACTT GAAACATATGCATCCTATTTCAGTGTTCCTAATTCCTACTT < 41bp 1 0.597765866067689 1 0.365167498588562 experiment 0.804468267864622 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control METTL14 ENSG00000145388 CDS Human protein_coding chr4:119631220 chr4:119631225 nonsynonymous SNV 0.904 0 26 hm5C_associated_SNPs_36961 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:119631222-119631245
64251 chr11 67017889 67017889 1 + A T STAD 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAAGATCCGGGGTTCGTACCTCACTGTCACGCTAC < 41bp 1 0.10161049309749 1 0.0782735347747803 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017889 synonymous SNV . 0 19 hm5C_associated_SNPs_36962 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67017853-67017899
64251 chr16 2812491 2812491 1 + A G STAD 2812509 + 2812489 2812529 41 AGACGTGGCCGCTCACGCTCCAGAACCCCAGCCAGACGTGG AGGCGTGGCCGCTCACGCTCCAGAACCCCAGCCAGACGTGG < 41bp 1 0.604975120820814 1 0.798301815986633 experiment 0.790049758358373 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812509 chr16:2812491 synonymous SNV . 0 3 hm5C_associated_SNPs_36963 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr16:2812452-2812511
64251 chr22 40661413 40661413 1 + A T STAD 40661395 + 40661375 40661415 41 TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGAAT TTGAACTTAAGTTCACCAAACCCCATGGAGAATAAGGGTAT < 41bp 1 0.149907527250321 1 0.100488543510437 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40661395 chr22:40661413 synonymous SNV . 0 39 hm5C_associated_SNPs_36964 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40661385-40661416
64251 chr16 12450122 12450122 1 + G A STAD 12450135 + 12450115 12450155 41 GCTCATCGATCTCCGGGGACCGGTGAGTGTTTCCCCAACCC GCTCATCAATCTCCGGGGACCGGTGAGTGTTTCCCCAACCC < 41bp 1 0.355150423374034 1 0.429778933525085 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX29 ENSG00000048471 CDS Human protein_coding chr16:12450135 chr16:12450122 nonsynonymous SNV 0.875 1 8 hm5C_associated_SNPs_36965 0 0 2 PPIG POSTAR2 ENCODE chr16:12450019-12450128
64251 chr8 41355108 41355108 1 + A G STAD 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGGCCAGTCGTATCTCGAAGGTTGT < 41bp 1 0.186183492773327 1 0.314176797866821 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355108 synonymous SNV . 0 26 hm5C_associated_SNPs_36966 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:41355093-41355115
64251 chrX 73042647 73042647 1 - A G STAD 73042631 - 73042611 73042651 41 AGAGTGGGAATAAGAGAGGGCTTTTTATTTTTTCGTTCATA AGAGCGGGAATAAGAGAGGGCTTTTTATTTTTTCGTTCATA < 41bp 1 0.0119644382748558 1 0.0305525958538055 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042631 chrX:73042647 . . 0 5 hm5C_associated_SNPs_36967 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr15 40862035 40862035 1 + A G STAD 40862046 + 40862026 40862066 41 CACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCCTA CACGTCTTCGGTACCGAGTTCCGAGCTCAGCCCCTGGCCTA < 41bp 1 0.40064986423721 1 0.661861300468445 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40862046 chr15:40862035 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_36969 0 0 1 DDX6 POSTAR2 ENCODE chr15:40861969-40862065
64251 chr15 40862035 40862035 1 + A G STAD 40862047 + 40862027 40862067 41 ACGTCTTCAGTACCGAGTTCCGAGCTCAGCCCCTGGCCTAC ACGTCTTCGGTACCGAGTTCCGAGCTCAGCCCCTGGCCTAC < 41bp 1 0.574241557685452 1 0.901342570781708 experiment 0.851516884629096 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40862047 chr15:40862035 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_36970 0 0 1 DDX6 POSTAR2 ENCODE chr15:40861969-40862065
64251 chr12 64878159 64878159 1 + C T STAD 64878177 + 64878157 64878197 41 GGCGACGCTTAGTCTTAGAACCTGGAAGGCTGGCACAACAT GGTGACGCTTAGTCTTAGAACCTGGAAGGCTGGCACAACAT < 41bp 1 0.393497882328777 1 0.471804559230804 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBK1 ENSG00000183735 CDS Human protein_coding chr12:64878177 chr12:64878159 stopgain 0.981 1 3 hm5C_associated_SNPs_36971 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:64878142-64878202
64251 chr10 102824622 102824622 1 + T C STAD 102824602 + 102824582 102824622 41 GACCAGCTGAACTCTACAGGCATCCCCCAGCTGCGATCACT GACCAGCTGAACTCTACAGGCATCCCCCAGCTGCGATCACC < 41bp 1 0.0389411136064353 1 0.0369264185428619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KAZALD1 ENSG00000107821 CDS Human protein_coding chr10:102824602 chr10:102824622 nonsynonymous SNV 0.049 0 41 hm5C_associated_SNPs_36972 0 0 1 PPIG POSTAR2 ENCODE chr10:102824613-102824664
64251 chrX 69639532 69639532 1 + C T STAD 69639552 + 69639532 69639572 41 CGGACCCAGGATTCCGAAGGCTCCTTCAAACTGGAGGATCC TGGACCCAGGATTCCGAAGGCTCCTTCAAACTGGAGGATCC < 41bp 1 0.33922377495632 1 0.341588944196701 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639552 chrX:69639532 nonsynonymous SNV 0.178 0 1 hm5C_associated_SNPs_36973 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69639528-69639546
64251 chr12 72316783 72316783 1 + T C STAD 72316769 + 72316749 72316789 41 TTTTTCATATCCAGGAATTGCCACAAGCAGTCTGTGAGATC TTTTTCATATCCAGGAATTGCCACAAGCAGTCTGCGAGATC < 41bp 1 0.399784884100026 1 0.103412002325058 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72316769 chr12:72316783 synonymous SNV . 0 35 hm5C_associated_SNPs_36975 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:72316773-72316839
64251 chr3 32493939 32493939 1 + A C STAD 32493943 + 32493923 32493963 41 ATATGGCTGTCCTATAAGATCTCGTGTGTAACCCAGTCCAC ATATGGCTGTCCTATACGATCTCGTGTGTAACCCAGTCCAC < 41bp 1 0.767797422630531 1 0.180410027503967 experiment 0.464405154738939 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32493943 chr3:32493939 nonsynonymous SNV 0.841 4 17 hm5C_associated_SNPs_36976 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32493907-32493946
64251 chr16 28845679 28845679 1 + C A STAD 28845668 + 28845648 28845688 41 GTGTCCTCATCCCCAGGCACCTCAGATGTATCCATATCCTG GTGTCCTCATCCCCAGGCACCTCAGATGTATACATATCCTG < 41bp 1 0.300331237834003 1 0.0915851891040802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845668 chr16:28845679 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_36978 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:28845660-28845700
64251 chr12 122213555 122213555 1 + G A STAD 122213570 + 122213550 122213590 41 CCTCGGCAACTTCCTGACCACGCTCAAAGTCGTGCATGCCA CCTCGACAACTTCCTGACCACGCTCAAAGTCGTGCATGCCA < 41bp 1 0.104575707268593 1 0.101102143526077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM120B ENSG00000188735 CDS Human protein_coding chr12:122213570 chr12:122213555 nonsynonymous SNV 0.945 4 6 hm5C_associated_SNPs_36979 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:122213542-122213557
64251 chr5 139928648 139928648 1 + G T STAD 139928628 + 139928608 139928648 41 CTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACAGAG CTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACAGAT < 41bp 1 0.573086724830526 1 0.406953275203705 experiment 0.853826550338948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1-EIF4EBP3;EIF4EBP3 ENSG00000131503;ENSG00000243056;ENSG00000254996 CDS Human other chr5:139928628 chr5:139928648 stopgain 1.000 0 41 hm5C_associated_SNPs_36980 0 0 2 PRPF8 POSTAR2 ENCODE chr5:139928622-139928688
64251 chr16 8735041 8735041 1 + G T STAD 8735032 + 8735012 8735052 41 TGGACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTC TGGACTGGCTGAAGGACGACCTCTGCACATGTGTGTGTTTC < 41bp 1 0.203623980524975 1 0.378254532814026 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735032 chr16:8735041 nonsynonymous SNV 0.969 4 30 hm5C_associated_SNPs_36983 0 0 19 BUD13 POSTAR2 ENCODE chr16:8735004-8735058
64251 chr2 113243546 113243546 1 + A G STAD 113243539 + 113243519 113243559 41 GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG GGTGAATTACTACAGGGGTGCTGACAAGCTGTGTCGCAAAG < 41bp 1 0.270143085720802 1 0.123491704463959 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113243539 chr2:113243546 synonymous SNV . 0 28 hm5C_associated_SNPs_36984 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr2:113243522-113243549
64251 chr3 179104341 179104341 1 + T C STAD 179104323 + 179104303 179104343 41 GGACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGTTT GGACCACCCATGCCAAGGAGCGAGCCTTTAAACAGCAGCTT < 41bp 1 0.403162863006912 1 0.427637100219727 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MFN1 ENSG00000171109 CDS Human protein_coding chr3:179104323 chr3:179104341 nonsynonymous SNV 1.000 5 39 hm5C_associated_SNPs_36985 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:179104313-179104348
64251 chr6 11565992 11565992 1 + A T STAD 11565991 + 11565971 11566011 41 TGTTTGTGATGCTGCAGAGGCATAGGCAGGGAAGAGTCATC TGTTTGTGATGCTGCAGAGGCTTAGGCAGGGAAGAGTCATC < 41bp 1 0.350136324695879 1 0.0957486033439636 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMEM170B ENSG00000205269 CDS Human protein_coding chr6:11565991 chr6:11565992 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_36986 0 0 1 DDX3X POSTAR2 ENCODE chr6:11565920-11566074
64251 chr3 183368392 183368392 1 + T C STAD 183368408 + 183368388 183368428 41 GCTGTGCTCTCAGCCTGTAGCAGCTACTTCAGAGCTATGTT GCTGCGCTCTCAGCCTGTAGCAGCTACTTCAGAGCTATGTT < 41bp 1 0.531795996186647 1 0.24133825302124 experiment 0.936408007626706 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368408 chr3:183368392 nonsynonymous SNV 0.982 1 5 hm5C_associated_SNPs_36988 0 0 2 FXR1 POSTAR2 ENCODE chr3:183368357-183368481
64251 chr3 170078472 170078472 1 + C A STAD 170078471 + 170078451 170078491 41 ATTCCCAAGAAAGCATGTCGCCTACTGTATTTCTGCCTCTT ATTCCCAAGAAAGCATGTCGCATACTGTATTTCTGCCTCTT < 41bp 1 0.292061172432202 1 0.040166050195694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SKIL ENSG00000136603 CDS Human protein_coding chr3:170078471 chr3:170078472 nonsynonymous SNV 0.861 5 22 hm5C_associated_SNPs_36989 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:170078461-170078500
64251 chr3 45559430 45559430 1 + C T STAD 45559415 + 45559395 45559435 41 CTGATGCTCTCCCTGGGGTGCTGAGATGGCAACAACGACTG CTGATGCTCTCCCTGGGGTGCTGAGATGGCAACAATGACTG < 41bp 1 0.400371419376464 1 0.148492366075516 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45559415 chr3:45559430 stopgain 0.929 1 36 hm5C_associated_SNPs_36990 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:45559397-45559431
64251 chr21 34925015 34925015 1 + T C STAD 34925019 + 34924999 34925039 41 CCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGA CCCAACAATGCCACCGCTGCCACCTGAGGAGCCACCAATGA < 41bp 1 0.549674050209219 1 0.240454226732254 experiment 0.900651899581562 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925019 chr21:34925015 synonymous SNV . 0 17 hm5C_associated_SNPs_36991 0 0 31 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:34924900-34925020
64251 chr20 57480479 57480479 1 + A G STAD 57480488 + 57480468 57480508 41 GAGGATGAAGGAGTGCGTGCCTGCTACGAACGCTCCAACGA GAGGATGAAGGGGTGCGTGCCTGCTACGAACGCTCCAACGA < 41bp 1 0.572991956798792 1 0.367827594280243 experiment 0.854016086402415 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GNAS ENSG00000087460 CDS Human protein_coding chr20:57480488 chr20:57480479 synonymous SNV . 0 12 hm5C_associated_SNPs_36997 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr20:57480438-57480531
64251 chr5 10411586 10411586 1 + A G STAD 10411587 + 10411567 10411607 41 ATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGGCCTGTT ATGCAGCCCACCAAGCCATGCTCCAGCAGGGAGGGCCTGTT < 41bp 1 0.757410543071262 1 0.878625273704529 experiment 0.485178913857476 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411587 chr5:10411586 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_36998 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr5:10411585-10411586
64251 chr5 10411586 10411586 1 + A G STAD 10411602 + 10411582 10411622 41 CCATACTCCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC CCATGCTCCAGCAGGGAGGGCCTGTTGGCTTTCAGCCTTAC < 41bp 1 0.093936859858684 1 0.0476987063884735 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411602 chr5:10411586 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_36999 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr5:10411585-10411586
64251 chr6 5369396 5369396 1 + G A STAD 5369391 + 5369371 5369411 41 ATTTTCCACCAGCTGGAGGCCGTGCGGCTCTTCTCCAAGCA ATTTTCCACCAGCTGGAGGCCGTGCAGCTCTTCTCCAAGCA < 41bp 1 0.195293364338774 1 0.372743487358093 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FARS2 ENSG00000145982 CDS Human protein_coding chr6:5369391 chr6:5369396 nonsynonymous SNV 0.996 4 26 hm5C_associated_SNPs_37002 0 0 1 PPIG POSTAR2 ENCODE chr6:5369368-5369417
64251 chr3 50683579 50683579 1 + G A STAD 50683592 + 50683572 50683612 41 CTTTGTGGCTTCCCACCCTTCTACTCCAACACGGGCCAGGC CTTTGTGACTTCCCACCCTTCTACTCCAACACGGGCCAGGC < 41bp 1 0.355707084181018 1 0.217604100704193 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683592 chr3:50683579 nonsynonymous SNV 0.996 4 8 hm5C_associated_SNPs_37005 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr3:50683579-50683604
64251 chr1 242042466 242042466 1 + C T STAD 242042447 + 242042427 242042467 41 CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGCC CAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTCTTTGTC < 41bp 1 0.196243201465277 1 0.11928391456604 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242042447 chr1:242042466 nonsynonymous SNV 0.055 0 40 hm5C_associated_SNPs_37006 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr1:242042421-242042473
64251 chr2 182786931 182786931 1 + C T STAD 182786940 + 182786920 182786960 41 GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG GGTGGCTCTAATGCCAACAGCTCCTTCTAGAACAGGCTCTG < 41bp 1 0.463927074054266 1 0.245652139186859 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786940 chr2:182786931 nonsynonymous SNV 0.216 2 12 hm5C_associated_SNPs_37007 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:182786896-182786937
64251 chr21 30411810 30411810 1 + G A STAD 30411804 + 30411784 30411824 41 CTTTTTGTTTTTCTCTAGAGCAGTGCGGTTTAAAGGCTATC CTTTTTGTTTTTCTCTAGAGCAGTGCAGTTTAAAGGCTATC < 41bp 1 0.253083281300632 1 0.130254179239273 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30411804 chr21:30411810 nonsynonymous SNV 0.943 4 27 hm5C_associated_SNPs_37008 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30411770-30411811
64251 chr10 17275845 17275845 1 + C T STAD 17275853 + 17275833 17275873 41 AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAA AGCCTGACCTCATGGCTGCCCTGCGTGACGTACGTCAGCAA < 41bp 1 0.651629762763347 1 0.779238402843475 experiment 0.696740474473305 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275853 chr10:17275845 nonsynonymous SNV 0.999 5 13 hm5C_associated_SNPs_37009 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr10 17275845 17275845 1 + C T STAD 17275856 + 17275836 17275876 41 CTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATAT CTGACCTCATGGCTGCCCTGCGTGACGTACGTCAGCAATAT < 41bp 1 0.403729767074679 1 0.108016759157181 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275856 chr10:17275845 nonsynonymous SNV 0.999 5 10 hm5C_associated_SNPs_37010 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr10 17275845 17275845 1 + C T STAD 17275861 + 17275841 17275881 41 CTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG CTCATGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG < 41bp 1 0.11013117230647 1 0.0413139164447784 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275861 chr10:17275845 nonsynonymous SNV 0.999 5 5 hm5C_associated_SNPs_37011 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr5 169127051 169127051 1 + A G STAD 169127059 + 169127039 169127079 41 TGCTGGTGGGTGACATCATTCAGATTCGCAAGGACTATCCA TGCTGGTGGGTGGCATCATTCAGATTCGCAAGGACTATCCA < 41bp 1 0.528922065077179 1 0.843352317810059 experiment 0.942155869845642 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127059 chr5:169127051 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_37012 0 0 2 DDX24 POSTAR2 ENCODE chr5:169127026-169127118
64251 chr22 40697276 40697276 1 + C T STAD 40697295 + 40697275 40697315 41 ACGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGG ATGCATTGAATGTGGGGCTCCCAGACCTTCAAACCAAAGGG < 41bp 1 0.190786038043668 1 0.493287831544876 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40697295 chr22:40697276 synonymous SNV . 0 2 hm5C_associated_SNPs_37015 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:40697261-40697299
64251 chr3 10320676 10320676 1 + G A STAD 10320677 + 10320657 10320697 41 CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC CCCTCACCTTGGCTGCCTTACGTGAGAACACCAGTCGCCTC < 41bp 1 0.793629554494405 1 0.740687251091003 experiment 0.41274089101119 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320677 chr3:10320676 synonymous SNV . 0 20 hm5C_associated_SNPs_37016 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr3 10320676 10320676 1 + G A STAD 10320688 + 10320668 10320708 41 GCTGCCTTGCGTGAGAACACCAGTCGCCTCTACAGTCTTTA GCTGCCTTACGTGAGAACACCAGTCGCCTCTACAGTCTTTA < 41bp 1 0.144090389894953 1 0.116946876049042 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320688 chr3:10320676 synonymous SNV . 0 9 hm5C_associated_SNPs_37017 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr17 30806294 30806294 1 + T A STAD 30806305 + 30806285 30806325 41 GGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTG GGGCAGAGCACCGGGATGACCCAATCATCAGCACACACTTG < 41bp 1 0.187622000045355 1 0.260987907648087 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30806305 chr17:30806294 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_37018 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:30806159-30806304
64251 chr14 35592599 35592599 1 + A C STAD 35592593 + 35592573 35592613 41 ACCAGCAGAGGTTGTTTTCTCTTAAAACAATGTCTCCACAG ACCAGCAGAGGTTGTTTTCTCTTAAACCAATGTCTCCACAG < 41bp 1 0.618665406254856 1 0.447177737951279 experiment 0.762669187490288 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KIAA0391 ENSG00000100890;ENSG00000258790 CDS Human other chr14:35592593 chr14:35592599 nonsynonymous SNV 0.443 0 27 hm5C_associated_SNPs_37019 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:35592568-35592606
64251 chr1 228346604 228346604 1 + G A STAD 228346609 + 228346589 228346629 41 TCCCTGCGGCCTCCCGGGGGCCCCCCAGAGCAGGCGCCCCC TCCCTGCGGCCTCCCAGGGGCCCCCCAGAGCAGGCGCCCCC < 41bp 1 0.185508366107728 1 0.045114666223526 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GJC2 ENSG00000198835 CDS Human protein_coding chr1:228346609 chr1:228346604 nonsynonymous SNV 0.001 1 16 hm5C_associated_SNPs_37020 0 0 1 SND1 POSTAR2 ENCODE chr1:228346530-228346631
64251 chr17 59161841 59161841 1 + C T STAD 59161840 + 59161820 59161860 41 CATTGCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCAT CATTGCAGGATCCAGCCAGTCTGCTCTGACCCCGTCAGCAT < 41bp 1 0.489697397231464 1 0.13773512840271 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BCAS3 ENSG00000141376 CDS Human protein_coding chr17:59161840 chr17:59161841 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_37023 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:59161820-59161850
64251 chr18 74631811 74631811 1 + G A STAD 74631822 + 74631802 74631842 41 CACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCC CACTTTCACAGAGGAGGAGACAGCCCAGTTAGCCAAGATCC < 41bp 1 0.29566892777303 1 0.279817700386047 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631822 chr18:74631811 synonymous SNV . 0 10 hm5C_associated_SNPs_37026 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:74631797-74631824
64251 chrX 73046077 73046077 1 - C T STAD 73046069 - 73046049 73046089 41 GGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATGTGAAGA GGAAAAAAAAGTACCAGGCTCTCTAGAGAAAAATGTGAAGA < 41bp 1 0.214629444979524 1 0.792411208152771 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046069 chrX:73046077 . . 0 13 hm5C_associated_SNPs_37028 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046077 73046077 1 - C T STAD 73046075 - 73046055 73046095 41 TGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAATG TGTTGGGGAAAAAAAAGTACCAGGCTCTCTAGAGAAAAATG < 41bp 1 0.304461681253248 1 0.437959045171738 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046075 chrX:73046077 . . 0 19 hm5C_associated_SNPs_37029 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046077 73046077 1 - C T STAD 73046076 - 73046056 73046096 41 TTGTTGGGGAAAAAAAAGTGCCAGGCTCTCTAGAGAAAAAT TTGTTGGGGAAAAAAAAGTACCAGGCTCTCTAGAGAAAAAT < 41bp 1 0.137346435965371 1 0.136719018220901 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046076 chrX:73046077 . . 0 20 hm5C_associated_SNPs_37030 0 0 86 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr2 152273371 152273371 1 + G A STAD 152273359 + 152273339 152273379 41 TCATTAGAAATACTGTTTAACAAAGGAGAGACGCATTCTGC TCATTAGAAATACTGTTTAACAAAGGAGAGACACATTCTGC < 41bp 1 0.288221777501662 1 0.53180330991745 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273359 chr2:152273371 synonymous SNV . 0 33 hm5C_associated_SNPs_37033 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:152273332-152273400
64251 chr16 74330861 74330861 1 + C T STAD 74330876 + 74330856 74330896 41 TGCTGCTCAGTGTGGTGGATCATTTCAACCGGTGAGCGAGC TGCTGTTCAGTGTGGTGGATCATTTCAACCGGTGAGCGAGC < 41bp 1 0.141850522436852 1 0.0291808843612671 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74330876 chr16:74330861 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_37034 0 0 17 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:74330860-74330880
64251 chr2 219616528 219616528 1 + A C STAD 219616527 + 219616507 219616547 41 TGACCCAGAAAATTCCTGATCAGGTAGGAGATTGGTCTTCC TGACCCAGAAAATTCCTGATCCGGTAGGAGATTGGTCTTCC < 41bp 1 0.22893749338815 1 0.177618682384491 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219616527 chr2:219616528 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_37035 0 0 3 PPIG POSTAR2 ENCODE chr2:219616480-219616532
64251 chr17 43220923 43220923 1 + G A STAD 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGAACCCAAAAG < 41bp 1 0.386871864179408 1 0.792316794395447 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220923 nonsynonymous SNV 0.994 1 32 hm5C_associated_SNPs_37036 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:43220920-43220940
64251 chr1 52870494 52870494 1 + A G STAD 52870493 + 52870473 52870513 41 CAATATCTGGTGGAGAAGATCATTCGAACGCGAATCTATGA CAATATCTGGTGGAGAAGATCGTTCGAACGCGAATCTATGA < 41bp 1 0.163208936145729 1 0.124238401651382 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52870493 chr1:52870494 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_37037 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:52870455-52870495
64251 chr11 9456521 9456521 1 + A G STAD 9456531 + 9456511 9456551 41 CAGTTGATACAGACACACTTCTGTCTGACACCAAGTATCTT CAGTTGATACGGACACACTTCTGTCTGACACCAAGTATCTT < 41bp 1 0.169850922268985 1 0.0737857222557068 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9456531 chr11:9456521 synonymous SNV . 0 11 hm5C_associated_SNPs_37038 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9456502-9456562
64251 chr12 113379472 113379472 1 + C T STAD 113379481 + 113379461 113379501 41 GGACCAGAGGGCCCGCCGTGCAGAGATCCTCAGTGAGATGC GGACCAGAGGGTCCGCCGTGCAGAGATCCTCAGTGAGATGC < 41bp 1 0.578217394711029 1 0.233223915100098 experiment 0.843565210577942 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OAS3 ENSG00000111331 CDS Human protein_coding chr12:113379481 chr12:113379472 nonsynonymous SNV 0.002 0 12 hm5C_associated_SNPs_37039 0 0 1 BUD13 POSTAR2 ENCODE chr12:113379464-113379593
64251 chr2 217364716 217364716 1 + C A STAD 217364705 + 217364685 217364725 41 GACGAGCTGTGGGGATCTGGCACTGTGGTTCCTGCATGAAG GACGAGCTGTGGGGATCTGGCACTGTGGTTCATGCATGAAG < 41bp 1 0.702661112970851 1 0.168196350336075 experiment 0.594677774058298 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364705 chr2:217364716 synonymous SNV . 0 32 hm5C_associated_SNPs_37040 0 0 75 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr2 217364716 217364716 1 + C A STAD 217364733 + 217364713 217364753 41 TTCCTGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACA TTCATGCATGAAGACAGTGGCTGGCGGTGCCTGGACGTACA < 41bp 1 0.729223023625801 1 0.243797272443771 experiment 0.541553952748397 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL37A ENSG00000197756 CDS Human protein_coding chr2:217364733 chr2:217364716 synonymous SNV . 0 4 hm5C_associated_SNPs_37041 0 0 75 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:217364660-217364740
64251 chr6 31599957 31599957 1 + C T STAD 31599963 + 31599943 31599983 41 GGGGTGCCATCTCGCCGGGGCCGAGGAGGAGGGAGGCCCCC GGGGTGCCATCTCGTCGGGGCCGAGGAGGAGGGAGGCCCCC < 41bp 1 0.398383042103977 1 0.785210907459259 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599963 chr6:31599957 synonymous SNV . 0 15 hm5C_associated_SNPs_37042 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr6:31599924-31599977
64251 chr1 45244276 45244276 1 + T C STAD 45244279 + 45244259 45244299 41 TCAAGGCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCT TCAAGGCCGGGACAGTGCGGCCGAGCAGATGGCTATGTGCT < 41bp 1 0.243717753335426 1 0.35460153222084 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244279 chr1:45244276 synonymous SNV . 0 18 hm5C_associated_SNPs_37043 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45244248-45244286
64251 chr1 45244276 45244276 1 + T C STAD 45244284 + 45244264 45244304 41 GCCGGGACAGTGTGGCCGAGCAGATGGCTATGTGCTAGAGG GCCGGGACAGTGCGGCCGAGCAGATGGCTATGTGCTAGAGG < 41bp 1 0.6167746221083 1 0.341871380805969 experiment 0.766450755783399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45244284 chr1:45244276 synonymous SNV . 0 13 hm5C_associated_SNPs_37044 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45244248-45244286
64251 chr16 22271788 22271788 1 + C T STAD 22271796 + 22271776 22271816 41 TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAACATGGC TGCCCAGATTGGTCAGTGTTCAGTGACCTCGATAACATGGC < 41bp 1 0.330911833283654 1 0.617003500461578 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22271796 chr16:22271788 nonsynonymous SNV 0.987 1 13 hm5C_associated_SNPs_37045 0 0 2 PPIG POSTAR2 ENCODE chr16:22271786-22271804
64251 chr16 57486772 57486772 1 + A G STAD 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAGCAGTTGCAGCGCCGCATCCTGACGGCAGCCCTT < 41bp 1 0.564958284312757 1 0.730299353599548 experiment 0.870083431374487 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486772 nonsynonymous SNV 0.974 0 19 hm5C_associated_SNPs_37046 0 0 3 BUD13 POSTAR2 ENCODE chr16:57486763-57486834
64251 chr3 129197018 129197018 1 + G A STAD 129197026 + 129197006 129197046 41 AGAAGTTTGAGTGCAACCTCCTGGTGGTGTGTGCCAATCAC AGAAGTTTGAGTACAACCTCCTGGTGGTGTGTGCCAATCAC < 41bp 1 0.601713678895449 1 0.218000203371048 experiment 0.796572642209102 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT122 ENSG00000163913 CDS Human protein_coding chr3:129197026 chr3:129197018 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_37047 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr3:129197010-129197038
64251 chr10 81841641 81841641 1 + G A STAD 81841623 + 81841603 81841643 41 GTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGGCC GTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGACC < 41bp 1 0.294358058153306 1 0.0242936015129089 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM254 ENSG00000133678 CDS Human protein_coding chr10:81841623 chr10:81841641 synonymous SNV 0.601 1 39 hm5C_associated_SNPs_37048 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:81841619-81841665
64251 chr2 10560033 10560033 1 + G A STAD 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAAATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA < 41bp 1 0.100943469723138 1 0.161537379026413 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560033 synonymous SNV . 0 3 hm5C_associated_SNPs_37049 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10560014-10560052
64251 chr19 13054412 13054412 1 + A G STAD 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCATACGCTGAGGGGTTTGGCAACGA < 41bp 1 0.62981161446094 1 0.175479799509048 experiment 0.740376771078119 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054412 nonsynonymous SNV 0.948 2 29 hm5C_associated_SNPs_37050 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054412 13054412 1 + A G STAD 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCATACGCTGAGGGGTTTGGCAACGAGA < 41bp 1 0.724376764445992 1 0.346258342266083 experiment 0.551246471108015 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054412 nonsynonymous SNV 0.948 2 27 hm5C_associated_SNPs_37051 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054412 13054412 1 + A G STAD 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGGGTTTGGCAACGAGACGTGGGGCGTAAC < 41bp 1 0.693804095476867 1 0.85487961769104 experiment 0.612391809046267 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054412 nonsynonymous SNV 0.948 2 14 hm5C_associated_SNPs_37052 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054412 13054412 1 + A G STAD 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGGGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA < 41bp 1 0.697585366724662 1 0.466041207313538 experiment 0.604829266550676 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054412 nonsynonymous SNV 0.948 2 6 hm5C_associated_SNPs_37053 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 1434841 1434841 1 + C T STAD 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGGCCCCCTCGCCGGCGGCAGCGG < 41bp 1 0.365443472476637 1 0.1053446829319 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434841 nonsynonymous SNV 0.938 2 26 hm5C_associated_SNPs_37054 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434841 1434841 1 + C T STAD 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGGCCCCCTCGCCGGCGGCAGCGGC < 41bp 1 0.46744847435043 1 0.0850081741809845 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434841 nonsynonymous SNV 0.938 2 25 hm5C_associated_SNPs_37055 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434841 1434841 1 + C T STAD 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGGCCCCCTCGCCGGCGGCAGCGGCT < 41bp 1 0.295507041089439 1 0.148736029863358 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434841 nonsynonymous SNV 0.938 2 24 hm5C_associated_SNPs_37056 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434841 1434841 1 + C T STAD 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGGCCCCCTCGCCGGCGGCAGCGGCTT < 41bp 1 0.49560952929762 1 0.0840989947319031 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434841 nonsynonymous SNV 0.938 2 23 hm5C_associated_SNPs_37057 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr6 96976501 96976501 1 + A G STAD 96976482 + 96976462 96976502 41 GCTCGACATAAAGCACGTATCCGTGGACTATTCAGTGCTAT GCTCGACATAAAGCACGTATCCGTGGACTATTCAGTGCTGT < 41bp 1 0.418287265699688 1 0.418779671192169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UFL1 ENSG00000014123 CDS Human protein_coding chr6:96976482 chr6:96976501 nonsynonymous SNV 0.950 0 40 hm5C_associated_SNPs_37058 0 0 1 RPS3 POSTAR2 ENCODE chr6:96976457-96976509
64251 chr6 96976501 96976501 1 + A G STAD 96976507 + 96976487 96976527 41 GACTATTCAGTGCTATTACCCGGTAAGTATATTTTAAAGTA GACTATTCAGTGCTGTTACCCGGTAAGTATATTTTAAAGTA < 41bp 1 0.654026484719613 1 0.346059799194336 experiment 0.691947030560774 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UFL1 ENSG00000014123 CDS Human protein_coding chr6:96976507 chr6:96976501 nonsynonymous SNV 0.950 0 15 hm5C_associated_SNPs_37059 0 0 1 RPS3 POSTAR2 ENCODE chr6:96976457-96976509
64251 chrX 49093645 49093645 1 + C T STAD 49093654 + 49093634 49093674 41 GATCAACCCTGCGGTGGGCTCTGGCCTCAGCCCTCTGCTGC GATCAACCCTGTGGTGGGCTCTGGCCTCAGCCCTCTGCTGC < 41bp 1 0.778443860980685 1 0.318455994129181 experiment 0.443112278038631 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093654 chrX:49093645 nonsynonymous SNV 0.915 1 12 hm5C_associated_SNPs_37066 0 0 1 METAP2 POSTAR2 ENCODE chrX:49093611-49093677
64251 chr2 236877258 236877258 1 + A G STAD 236877245 + 236877225 236877265 41 ACTAGCAACTTCAAAGCCGACGGCCTGTCCGGCACTGCTGA ACTAGCAACTTCAAAGCCGACGGCCTGTCCGGCGCTGCTGA < 41bp 1 0.168265685942006 1 0.532856225967407 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236877245 chr2:236877258 nonsynonymous SNV 0.994 0 34 hm5C_associated_SNPs_37068 0 0 8 BUD13 POSTAR2 ENCODE chr2:236877234-236877269
64251 chr2 236877258 236877258 1 + A G STAD 236877249 + 236877229 236877269 41 GCAACTTCAAAGCCGACGGCCTGTCCGGCACTGCTGAAGGT GCAACTTCAAAGCCGACGGCCTGTCCGGCGCTGCTGAAGGT < 41bp 1 0.0401066231740038 1 0.0978343486785889 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236877249 chr2:236877258 nonsynonymous SNV 0.994 0 30 hm5C_associated_SNPs_37069 0 0 8 BUD13 POSTAR2 ENCODE chr2:236877234-236877269
64251 chr12 56862392 56862392 1 + C A STAD 56862382 + 56862362 56862402 41 ATCCAAGGCGCAAGATGGCGCTGCTTTTTGCACGTTCTTTG ATCCAAGGCGCAAGATGGCGCTGCTTTTTGAACGTTCTTTG < 41bp 1 0.55713180899732 1 0.0738604962825775 experiment 0.88573638200536 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56862382 chr12:56862392 nonsynonymous SNV 0.228 1 31 hm5C_associated_SNPs_37088 0 0 8 CPSF3 POSTAR2 GSE37401,GSM917668 chr12:56862375-56862403
64251 chr7 91708840 91708840 1 + C G STAD 91708830 + 91708810 91708850 41 ATAGATCATCTGAGCAAAGACAAACCTGAACTAGAAGTAGT ATAGATCATCTGAGCAAAGACAAACCTGAAGTAGAAGTAGT < 41bp 1 0.062289113415901 1 0.23994505405426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91708830 chr7:91708840 nonsynonymous SNV 0.004 0 31 hm5C_associated_SNPs_37089 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:91708840-91708860
64251 chr6 44219805 44219805 1 + T C STAD 44219794 + 44219774 44219814 41 GAGCGAGTGCGGAAACGGGGCTTCGAGGTGGTATATATGAC GAGCGAGTGCGGAAACGGGGCTTCGAGGTGGCATATATGAC < 41bp 1 0.194215933267944 1 0.274162858724594 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219794 chr6:44219805 nonsynonymous SNV 0.996 1 32 hm5C_associated_SNPs_37095 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr6 44219805 44219805 1 + T C STAD 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTGGCATATATGACCGAGCCCATTGACGAGTACT < 41bp 1 0.394788560748707 1 0.198191612958908 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219805 nonsynonymous SNV 0.996 1 12 hm5C_associated_SNPs_37096 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219820
64251 chr2 85770889 85770889 1 + A G STAD 85770875 + 85770855 85770895 41 ACAGCTTCCCATGGGAAGTGCCCAAAAAGCTTAAATATTGA ACAGCTTCCCATGGGAAGTGCCCAAAAAGCTTAAGTATTGA < 41bp 1 0.210300370553231 1 0.2429538667202 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAT2A ENSG00000168906 CDS Human protein_coding chr2:85770875 chr2:85770889 synonymous SNV . 0 35 hm5C_associated_SNPs_37097 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:85770880-85770900
64251 chr16 24580551 24580551 1 + C T STAD 24580557 + 24580537 24580577 41 TAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA TAAAGGTTATGCTGTTGGAGCACAGCCTAGACCCTCAGCAA < 41bp 1 0.264229940128519 1 0.347281336784363 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580557 chr16:24580551 nonsynonymous SNV 0.975 0 15 hm5C_associated_SNPs_37098 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:24580536-24580557
64251 chr1 20234226 20234226 1 + C T STAD 20234221 + 20234201 20234241 41 GTCACCTTGGTGAAGACCTTCGCCGCTCTCAACATCTGACT GTCACCTTGGTGAAGACCTTCGCCGTTCTCAACATCTGACT < 41bp 1 0.673211687872901 1 0.0624816119670868 experiment 0.653576624254198 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20234221 chr1:20234226 nonsynonymous SNV 0.997 3 26 hm5C_associated_SNPs_37100 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:20234215-20234237
64251 chr12 53433109 53433109 1 + A G STAD 53433101 + 53433081 53433121 41 GGTCCAGGCGACGGAGGGAACAGAGACCACTGGAAGGAGTC GGTCCAGGCGACGGAGGGAACAGAGACCGCTGGAAGGAGTC < 41bp 1 0.74070809179933 1 0.626318752765656 experiment 0.518583816401339 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53433101 chr12:53433109 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_37101 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:53433090-53433121
64251 chr12 53433109 53433109 1 + A G STAD 53433121 + 53433101 53433141 41 CAGAGACCACTGGAAGGAGTCAGATAGGTATGCTTGTTCTC CAGAGACCGCTGGAAGGAGTCAGATAGGTATGCTTGTTCTC < 41bp 1 0.578540695045111 1 0.788370370864868 experiment 0.842918609909778 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53433121 chr12:53433109 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_37102 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:53433090-53433121
64251 chr4 119200402 119200402 1 + A G STAD 119200383 + 119200363 119200403 41 CCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAG CCTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGGG < 41bp 1 0.0995789843234293 1 0.217243641614914 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200383 chr4:119200402 . . 0 40 hm5C_associated_SNPs_37103 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr4 119200402 119200402 1 + A G STAD 119200384 + 119200364 119200404 41 CTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGC CTGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGGGC < 41bp 1 0.0211768432381916 1 0.129043459892273 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200384 chr4:119200402 . . 0 39 hm5C_associated_SNPs_37104 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr4 119200402 119200402 1 + A G STAD 119200385 + 119200365 119200405 41 TGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCA TGTCAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGGGCA < 41bp 1 0.180411181618255 1 0.251942455768585 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200385 chr4:119200402 . . 0 38 hm5C_associated_SNPs_37105 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr4 119200402 119200402 1 + A G STAD 119200388 + 119200368 119200408 41 CAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATAT CAGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGGGCATAT < 41bp 1 0.054724979217271 1 0.486092805862427 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200388 chr4:119200402 . . 0 35 hm5C_associated_SNPs_37106 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr4 119200402 119200402 1 + A G STAD 119200389 + 119200369 119200409 41 AGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGAGCATATC AGCCGTGGCAGTCTCCCTTCCTAGCCATGGAAGGGCATATC < 41bp 1 0.263292732082161 1 0.0870583951473236 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200389 chr4:119200402 . . 0 34 hm5C_associated_SNPs_37107 0 0 34 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:119200380-119200420
64251 chr22 39826124 39826124 1 + C T STAD 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCTGCCTGGCGA < 41bp 1 0.112529994270136 1 0.193946152925491 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826124 nonsynonymous SNV 0.322 1 32 hm5C_associated_SNPs_37108 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr10 71128383 71128383 1 + G A STAD 71128375 + 71128355 71128395 41 AAACTGCTTAACAAAGCCATCAAAAAGCGAGGGGTAATTTC AAACTGCTTAACAAAGCCATCAAAAAGCAAGGGGTAATTTC < 41bp 1 0.454053382364892 1 0.422480285167694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71128375 chr10:71128383 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_37109 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:71128355-71128390
64251 chr19 50912103 50912103 1 + G T STAD 50912092 + 50912072 50912112 41 CTTCTCCTCGCTGTACCCGTCCATCATGATGGCCCACAACC CTTCTCCTCGCTGTACCCGTCCATCATGATGTCCCACAACC < 41bp 1 0.0259747551941437 1 0.0343663692474365 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912092 chr19:50912103 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_37110 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50912040-50912120
64251 chr19 35741260 35741260 1 + A G STAD 35741270 + 35741250 35741290 41 AACCCCTACCACGTGGTGATCCTCTTCCAGCCTGTGACCCT AACCCCTACCGCGTGGTGATCCTCTTCCAGCCTGTGACCCT < 41bp 1 0.106273437295245 1 0.0199342966079712 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741270 chr19:35741260 nonsynonymous SNV 0.906 0 11 hm5C_associated_SNPs_37111 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:35741234-35741268
64251 chrX 7171305 7171305 1 + C T STAD 7171312 + 7171292 7171332 41 GCAGCATCAAGGCCGAACATCATCCTGGTGATGGCTGACGA GCAGCATCAAGGCTGAACATCATCCTGGTGATGGCTGACGA < 41bp 1 0.269003429463427 1 0.0493785440921783 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control STS ENSG00000101846 CDS Human protein_coding chrX:7171312 chrX:7171305 nonsynonymous SNV 0.104 5 14 hm5C_associated_SNPs_37112 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:7171300-7171320
64251 chr14 39649857 39649857 1 + G A STAD 39649851 + 39649831 39649871 41 ACAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGG ACAAGAAGAGGGTAAGGTGGCTCAGCAAGAGGAAGAGTTGG < 41bp 1 0.717825215379309 1 0.252651572227478 experiment 0.564349569241382 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649851 chr14:39649857 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_37114 0 0 30 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr14:39649820-39649860
64251 chr1 44684006 44684006 1 + G A STAD 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCAGAGCAGGAGTACCAGCTTTATCTCCACGATGAT < 41bp 1 0.515570946519049 1 0.293220221996307 experiment 0.968858106961902 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684006 synonymous SNV . 0 8 hm5C_associated_SNPs_37115 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44683983-44684008
64251 chr3 126751404 126751404 1 + C T STAD 126751389 + 126751369 126751409 41 CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTATGCCAA < 41bp 1 0.412942593026652 1 0.525306284427643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751389 chr3:126751404 synonymous SNV . 0 36 hm5C_associated_SNPs_37116 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:126751393-126751415
64251 chrX 48759272 48759272 1 + A G STAD 48759267 + 48759247 48759287 41 TCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCAA TCCTGGCTCTCCCCACATGACCCCAGCTCCGTGGTTACCAA < 41bp 1 0.736664862890338 1 0.0980669260025024 experiment 0.526670274219324 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759267 chrX:48759272 nonsynonymous SNV 0.956 0 26 hm5C_associated_SNPs_37117 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr2 27598553 27598553 1 + C T STAD 27598533 + 27598513 27598553 41 CCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGC CCAGCAACTCCGAGAAGGCTCCTTCCGGGTCACCCGCATGT < 41bp 1 0.0508470152538005 1 0.0313926339149475 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598533 chr2:27598553 stopgain 0.999 1 41 hm5C_associated_SNPs_37118 0 0 1 RBM15 POSTAR2 ENCODE chr2:27598546-27598577
64251 chr2 27598553 27598553 1 + C T STAD 27598570 + 27598550 27598590 41 ATGCGATGCTGGCGGGTCACCTCCTCTGTGAGTCGGGTTAG ATGTGATGCTGGCGGGTCACCTCCTCTGTGAGTCGGGTTAG < 41bp 1 0.714999624980424 1 0.182935476303101 experiment 0.570000750039152 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX17 ENSG00000115234 CDS Human protein_coding chr2:27598570 chr2:27598553 stopgain 0.999 1 4 hm5C_associated_SNPs_37119 0 0 1 RBM15 POSTAR2 ENCODE chr2:27598546-27598577
64251 chr6 144109947 144109947 1 + G A STAD 144109932 + 144109912 144109952 41 CAGCCTGAGACCCACAGTGGCAGAGCTACAAGCTCGAAGGA CAGCCTGAGACCCACAGTGGCAGAGCTACAAGCTCAAAGGA < 41bp 1 0.413135713391779 1 0.61065936088562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144109932 chr6:144109947 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_37120 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:144109924-144109959
64251 chr11 71209472 71209472 1 + G A STAD 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GCATACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT < 41bp 1 0.190696491795373 1 0.36709463596344 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209472 synonymous SNV . 0 3 hm5C_associated_SNPs_37122 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:71209471-71209472
64251 chr19 7584566 7584566 1 + C T STAD 7584583 + 7584563 7584603 41 CAGCCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAG CAGTCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAG < 41bp 1 0.219332143013568 1 0.437141209840775 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584583 chr19:7584566 synonymous SNV . 0 4 hm5C_associated_SNPs_37123 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584559-7584603
64251 chr19 7584566 7584566 1 + C T STAD 7584584 + 7584564 7584604 41 AGCCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAGC AGTCCGCCCCGGCCCTTCTCCTGCCCGGATTGCGGGCGAGC < 41bp 1 0.447226347236752 1 0.0703980922698975 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584584 chr19:7584566 synonymous SNV . 0 3 hm5C_associated_SNPs_37124 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584559-7584603
64251 chr22 42271622 42271622 1 + A G STAD 42271638 + 42271618 42271658 41 CAGAATGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCAGG CAGAGTGTCCTTCTGATGTCCCCCCCAGCCTCTGACTCAGG < 41bp 1 0.0377078096286322 1 0.0432754456996918 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42271638 chr22:42271622 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_37125 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:42271602-42271624
64251 chr12 56420729 56420729 1 + G A STAD 56420731 + 56420711 56420751 41 GAGCCTCACTCCCCTGGGGGCATCCGGCTGCCCAATGGCAA GAGCCTCACTCCCCTGGGAGCATCCGGCTGCCCAATGGCAA < 41bp 1 0.13912945729418 1 0.101568043231964 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56420731 chr12:56420729 nonsynonymous SNV 0.995 3 19 hm5C_associated_SNPs_37126 0 0 1 ZNF622 POSTAR2 ENCODE chr12:56420672-56420760
64251 chr5 137523059 137523059 1 + G A STAD 137523065 + 137523045 137523085 41 CCTACGCTCACGGCGTTCCCCTTTACTCAAATCTGGGCCTT CCTACGCTCACGGCATTCCCCTTTACTCAAATCTGGGCCTT < 41bp 1 0.505523941814201 1 0.0969912111759186 experiment 0.988952116371598 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137523065 chr5:137523059 nonsynonymous SNV 0.848 0 15 hm5C_associated_SNPs_37127 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137523008-137523078
64251 chr14 23778068 23778068 1 + C T STAD 23778051 + 23778031 23778071 41 TTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGCGCG TTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGTGCG < 41bp 1 0.617005367618508 1 0.835199236869812 experiment 0.765989264762984 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCL2L2 ENSG00000129473 CDS Human protein_coding chr14:23778051 chr14:23778068 nonsynonymous SNV 0.996 0 38 hm5C_associated_SNPs_37128 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:23778043-23778129
64251 chr16 89925703 89925703 1 + A G STAD 89925700 + 89925680 89925720 41 CACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAG CACCCACCCCCCAGGAGGGACGGGGCCACCACGGCCCCGAG < 41bp 1 0.73111224496222 1 0.865410506725311 experiment 0.53777551007556 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925700 chr16:89925703 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_37129 0 0 4 GRWD1 POSTAR2 ENCODE chr16:89925601-89925705
64251 chr11 67202556 67202556 1 + G A STAD 67202549 + 67202529 67202569 41 TCTACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCG TCTACCTCCACTCCTGCCACCGCCGCCACCCTCGACCACCG < 41bp 1 0.742054370198005 1 0.723651885986328 experiment 0.51589125960399 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202549 chr11:67202556 synonymous SNV . 0 28 hm5C_associated_SNPs_37132 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202556 67202556 1 + G A STAD 67202551 + 67202531 67202571 41 TACCTCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCC TACCTCCACTCCTGCCACCGCCGCCACCCTCGACCACCGCC < 41bp 1 0.260008724299084 1 0.495404213666916 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202551 chr11:67202556 synonymous SNV . 0 26 hm5C_associated_SNPs_37133 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr11 67202556 67202556 1 + G A STAD 67202555 + 67202535 67202575 41 TCCACTCCTGCCACCGCCGCCGCCCTCGACCACCGCCCCTC TCCACTCCTGCCACCGCCGCCACCCTCGACCACCGCCCCTC < 41bp 1 0.576315608931534 1 0.144398808479309 experiment 0.847368782136933 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS6KB2 ENSG00000175634 CDS Human protein_coding chr11:67202555 chr11:67202556 synonymous SNV . 0 22 hm5C_associated_SNPs_37134 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67202537-67202604
64251 chr15 40509817 40509817 1 + A G STAD 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTGCAGAT < 41bp 1 0.388353380484363 1 0.5771843791008 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509802 chr15:40509817 synonymous SNV . 0 36 hm5C_associated_SNPs_37135 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:40509793-40509834
64251 chr19 54652450 54652450 1 + G A STAD 54652444 + 54652424 54652464 41 GCAGCCAGGCCTTGGGCCCCCCTTCCGGCCCCCACAACCCA GCAGCCAGGCCTTGGGCCCCCCTTCCAGCCCCCACAACCCA < 41bp 1 0.023938709912742 1 0.0366153419017792 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652444 chr19:54652450 nonsynonymous SNV 0.353 0 27 hm5C_associated_SNPs_37136 0 0 2 BUD13 POSTAR2 ENCODE chr19:54652446-54652545
64251 chr7 101459318 101459318 1 + C A STAD 101459315 + 101459295 101459335 41 CTCAATATGTCTCAAGATGGCGGCCAATGTGGGATCGATGT CTCAATATGTCTCAAGATGGCGGACAATGTGGGATCGATGT < 41bp 1 0.0969553836904127 1 0.347391694784164 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101459315 chr7:101459318 nonsynonymous SNV 0.489 2 24 hm5C_associated_SNPs_37137 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:101459300-101459320
64251 chr20 60701461 60701461 1 + G A STAD 60701448 + 60701428 60701468 41 GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTGCTCAGCC GGCGCCCTACGGCCCGCTGGCGGCCAGCTCCCTACTCAGCC < 41bp 1 0.645103023580306 1 0.510593771934509 experiment 0.709793952839388 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701448 chr20:60701461 synonymous SNV . 0 34 hm5C_associated_SNPs_37138 0 0 1 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr15 91432760 91432760 1 + G A STAD 91432750 + 91432730 91432770 41 GGCGCTGTCCCCCACAGGTCCGCACCTGACGTCCCACCCTG GGCGCTGTCCCCCACAGGTCCGCACCTGACATCCCACCCTG < 41bp 1 0.404240137770613 1 0.127287358045578 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FES ENSG00000182511 CDS Human protein_coding chr15:91432750 chr15:91432760 nonsynonymous SNV 0.819 0 31 hm5C_associated_SNPs_37139 0 0 1 PRPF8 POSTAR2 ENCODE chr15:91432651-91432760
64251 chr19 37853757 37853757 1 + C A STAD 37853759 + 37853739 37853779 41 CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA CAGCGGACACACTCAGGGATCAAGCCTTATGTGTGCAAGGA < 41bp 1 0.343267580460855 1 0.148670762777328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853759 chr19:37853757 nonsynonymous SNV 0.987 1 19 hm5C_associated_SNPs_37141 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr16 56867231 56867231 1 + C T STAD 56867224 + 56867204 56867244 41 GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCA GCAGTTGCCTTTCTTTTCCGCATGGAGTGGCTGCGCTGCCA < 41bp 1 0.470250900933248 1 0.20759254693985 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867224 chr16:56867231 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_37142 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56867205-56867236
64251 chr7 6049016 6049016 1 + C T STAD 6049030 + 6049010 6049050 41 GTAAAGCCCTATCACGGGGGCGGCGCGCCTCTCCGTGTGGA GTAAAGTCCTATCACGGGGGCGGCGCGCCTCTCCGTGTGGA < 41bp 1 0.639895550668759 1 0.460839122533798 experiment 0.720208898662481 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6049030 chr7:6049016 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_37147 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:6049003-6049029
64251 chr7 2473372 2473372 1 + G A STAD 2473368 + 2473348 2473388 41 GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA GGACCGGCAGCTCCGCTTCCCCCCAAGCTACCGGAACAGGA < 41bp 1 0.486425211250441 1 0.267067909240723 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473368 chr7:2473372 synonymous SNV . 0 25 hm5C_associated_SNPs_37148 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chr16 30964937 30964937 1 + C A STAD 30964947 + 30964927 30964967 41 CAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA CAGCACCGTCACAAGCTGAGCCAGCCTGCCCACCCCGGCAA < 41bp 1 0.317760272263002 1 0.0984014570713043 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964947 chr16:30964937 synonymous SNV . 0 11 hm5C_associated_SNPs_37149 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr14 21555165 21555165 1 + C T STAD 21555174 + 21555154 21555194 41 CCCCAGAGCTCCGAGTGCAGCAGATGGTGTCCATGGGCATT CCCCAGAGCTCTGAGTGCAGCAGATGGTGTCCATGGGCATT < 41bp 1 0.271458413172933 1 0.2230124771595 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21555174 chr14:21555165 stopgain 1.000 0 12 hm5C_associated_SNPs_37151 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:21555164-21555191
64251 chr5 173380259 173380259 1 + G A STAD 173380246 + 173380226 173380266 41 CTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATA CTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGAAGAGATA < 41bp 1 0.535219467642739 1 0.45435893535614 experiment 0.929561064714522 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173380246 chr5:173380259 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_37168 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr5:173380240-173380263
64251 chr10 5963495 5963495 1 + C T STAD 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT CGGGTGATGGAAGGGGAATTCCCTTCAAGGATACATTTGAT < 41bp 1 0.119989164743912 1 0.433421581983566 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963495 nonsynonymous SNV 0.771 5 8 hm5C_associated_SNPs_37169 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr10 5963495 5963495 1 + C T STAD 5963513 + 5963493 5963533 41 GACGGAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG GATGGAAGGGGAATTCCCTTCAAGGATACATTTGATTGGGG < 41bp 1 0.688932394544475 1 0.815739929676056 experiment 0.622135210911051 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963513 chr10:5963495 nonsynonymous SNV 0.771 5 3 hm5C_associated_SNPs_37170 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr2 10560040 10560040 1 + G A STAD 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACACCAACTTCTTCCCCTACGGCGACGCTTCCAA < 41bp 1 0.0817480223557577 1 0.0944913029670715 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560040 nonsynonymous SNV 0.996 1 10 hm5C_associated_SNPs_37171 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10560014-10560052
64251 chr19 58806359 58806359 1 + G T STAD 58806365 + 58806345 58806385 41 CACACCGAGGAGAGGCCCTACGAGTGTAACCACTGCGGGAA CACACCGAGGAGAGTCCCTACGAGTGTAACCACTGCGGGAA < 41bp 1 0.70467411178773 1 0.339517533779144 experiment 0.590651776424541 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58806365 chr19:58806359 nonsynonymous SNV 0.993 1 15 hm5C_associated_SNPs_37172 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:58806359-58806383
64251 chr16 56872944 56872944 1 + A G STAD 56872936 + 56872916 56872956 41 CTTCTTTTGGACTTGATCACCTTTTTTGACGAGTATCATAG CTTCTTTTGGACTTGATCACCTTTTTTGGCGAGTATCATAG < 41bp 1 0.0672818372091078 1 0.0278655588626862 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56872936 chr16:56872944 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_37173 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr16:56872895-56872945
64251 chr16 56872944 56872944 1 + A G STAD 56872961 + 56872941 56872981 41 TTGACGAGTATCATAGTGGTCATATTGATAGAGCTTTTGAT TTGGCGAGTATCATAGTGGTCATATTGATAGAGCTTTTGAT < 41bp 1 0.0640009725843121 1 0.041296511888504 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56872961 chr16:56872944 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_37174 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr16:56872895-56872945
64251 chr22 44368124 44368124 1 + G A STAD 44368123 + 44368103 44368143 41 TTTTTTTATTTAGGTGATGACGCACTTCCAAATGGGTTAGA TTTTTTTATTTAGGTGATGACACACTTCCAAATGGGTTAGA < 41bp 1 0.141927546013682 1 0.119208008050919 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44368123 chr22:44368124 nonsynonymous SNV 0.903 4 22 hm5C_associated_SNPs_37179 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr22:44368118-44368163
64251 chr7 99702533 99702533 1 + C T STAD 99702547 + 99702527 99702567 41 GAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA GAGATTTGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA < 41bp 1 0.0199833846743956 1 0.0653040111064911 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702547 chr7:99702533 nonsynonymous SNV 0.998 4 7 hm5C_associated_SNPs_37180 0 0 2 BUD13 POSTAR2 ENCODE chr7:99702493-99702553
64251 chr1 151006649 151006649 1 + T A STAD 151006659 + 151006639 151006679 41 GAGGCCGTCTTCGAGAAGTGCAGTCAGATCTCACTGTCACA GAGGCCGTCTACGAGAAGTGCAGTCAGATCTCACTGTCACA < 41bp 1 0.10478021062739 1 0.121313899755478 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006659 chr1:151006649 nonsynonymous SNV 0.621 1 11 hm5C_associated_SNPs_37181 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006623-151006651
64251 chr12 112460298 112460298 1 + T G STAD 112460318 + 112460298 112460338 41 TTAGACCAAGGGGAGGACTTCCCAGCATCAGAGATGACACG GTAGACCAAGGGGAGGACTTCCCAGCATCAGAGATGACACG < 41bp 1 0.295551820018782 1 0.416843563318253 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460318 chr12:112460298 nonsynonymous SNV 0.997 0 1 hm5C_associated_SNPs_37182 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:112460219-112460301
64251 chr12 109637357 109637357 1 + G A STAD 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAAGT < 41bp 1 0.220449606871723 1 0.679406881332397 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637357 synonymous SNV . 0 39 hm5C_associated_SNPs_37184 0 0 2 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr22 29695814 29695814 1 + G T STAD 29695816 + 29695796 29695836 41 TGGGAGGAAGAAGAGGAGGACGTGGAGGACCTGGAAAAATG TGGGAGGAAGAAGAGGAGTACGTGGAGGACCTGGAAAAATG < 41bp 1 0.620994237919767 1 0.479728519916534 experiment 0.758011524160466 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695816 chr22:29695814 nonsynonymous SNV 0.922 3 19 hm5C_associated_SNPs_37185 0 0 42 TARDBP POSTAR2 DRA001158,DRS012387 chr22:29695778-29695833
64251 chr22 29695814 29695814 1 + G T STAD 29695825 + 29695805 29695845 41 GAAGAGGAGGACGTGGAGGACCTGGAAAAATGGATAAGTAA GAAGAGGAGTACGTGGAGGACCTGGAAAAATGGATAAGTAA < 41bp 1 0.307805339766442 1 0.30617293715477 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695825 chr22:29695814 nonsynonymous SNV 0.922 3 10 hm5C_associated_SNPs_37186 0 0 42 TARDBP POSTAR2 DRA001158,DRS012387 chr22:29695778-29695833
64251 chr10 17277380 17277380 1 + G T STAD 17277369 + 17277349 17277389 41 TTGCCACCTACAGGAAGCTGCTGGAAGGCGAGGAGAGCAGG TTGCCACCTACAGGAAGCTGCTGGAAGGCGATGAGAGCAGG < 41bp 1 0.70843560793336 1 0.743827521800995 experiment 0.58312878413328 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277369 chr10:17277380 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_37187 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr10 17277380 17277380 1 + G T STAD 17277386 + 17277366 17277406 41 CTGCTGGAAGGCGAGGAGAGCAGGTAGGGAACTCAGACTTG CTGCTGGAAGGCGATGAGAGCAGGTAGGGAACTCAGACTTG < 41bp 1 0.655075241129738 1 0.498897820711136 experiment 0.689849517740523 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277386 chr10:17277380 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_37188 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr10:17277347-17277383
64251 chr7 91735033 91735033 1 + C T STAD 91735017 + 91734997 91735037 41 AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTTTGTT < 41bp 1 0.112134264912329 1 0.399781584739685 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91735017 chr7:91735033 nonsynonymous SNV 0.994 2 37 hm5C_associated_SNPs_37189 0 0 1 PRPF8 POSTAR2 ENCODE chr7:91735013-91735132
64251 chr2 190320060 190320060 1 + G T STAD 190320076 + 190320056 190320096 41 GCTGGTTTCAGTGAAACTGCCAAAATCCTCAAGCCAGGAAG GCTGTTTTCAGTGAAACTGCCAAAATCCTCAAGCCAGGAAG < 41bp 1 0.622188606084088 1 0.516179323196411 experiment 0.755622787831824 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190320076 chr2:190320060 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_37190 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:190320055-190320082
64251 chrX 41025371 41025371 1 + C G STAD 41025376 + 41025356 41025396 41 TTTTGAGCGATTCTTCAAAGCTGTGAATTGTCGAGAAGGAA TTTTGAGCGATTCTTGAAAGCTGTGAATTGTCGAGAAGGAA < 41bp 1 0.15792777087457 1 0.0799723863601685 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025376 chrX:41025371 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_37191 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41025249-41025461
64251 chr5 137518918 137518918 1 + G A STAD 137518909 + 137518889 137518929 41 TGCCCCACTACCTGTCCCGGCAAACATTCGCTTCTCCATCT TGCCCCACTACCTGTCCCGGCAAACATTCACTTCTCCATCT < 41bp 1 0.208881553584716 1 0.0863068103790283 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518909 chr5:137518918 nonsynonymous SNV 0.989 2 30 hm5C_associated_SNPs_37192 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:137518875-137518945
64251 chr2 38908455 38908455 1 + G A STAD 38908437 + 38908417 38908457 41 TCCAGGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCGTC TCCAGGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCATC < 41bp 1 0.742996074695909 1 0.740158557891846 experiment 0.514007850608182 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908437 chr2:38908455 nonsynonymous SNV 0.846 0 39 hm5C_associated_SNPs_37193 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:38908452-38908501
64251 chr1 233514948 233514948 1 + G T STAD 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTGGCATCTGTGGCTCTGGGACTGG < 41bp 1 0.154245438381128 1 0.0353773236274719 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514948 synonymous SNV . 0 25 hm5C_associated_SNPs_37194 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr5 128440935 128440935 1 + G T STAD 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTAAATGTCTTGGGAGCACGGTTCAAGAAATTGATTT < 41bp 1 0.608121156839652 1 0.432610958814621 experiment 0.783757686320696 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440935 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_37196 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:128440907-128440945
64251 chr19 36218423 36218423 1 + G A STAD 36218408 + 36218388 36218428 41 CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAG CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTAGCGAG < 41bp 1 0.55261020827024 1 0.497105568647385 experiment 0.89477958345952 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218408 chr19:36218423 stopgain 0.998 1 36 hm5C_associated_SNPs_37198 0 0 1 ZNF622 POSTAR2 ENCODE chr19:36218349-36218445
64251 chr11 812818 812818 1 + A C STAD 812802 + 812782 812822 41 GAAGGAGGAGTCTGAAGAGTCAGATGATGACATGGGATTTG GAAGGAGGAGTCTGAAGAGTCAGATGATGACATGGGCTTTG < 41bp 1 0.65236700746676 1 0.779668927192688 experiment 0.69526598506648 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPLP2 ENSG00000177600 CDS Human protein_coding chr11:812802 chr11:812818 synonymous SNV . 0 37 hm5C_associated_SNPs_37204 0 0 72 FUS POSTAR2 DRA001158,DRS012384 chr11:812756-812854
64251 chr3 184042671 184042671 1 + G A STAD 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAAGAACGAGGACGCCTGAAGGAAGAG < 41bp 1 0.642136243707971 1 0.623009085655212 experiment 0.715727512584059 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042671 synonymous SNV . 0 17 hm5C_associated_SNPs_37207 0 0 15 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr3 184042671 184042671 1 + G A STAD 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAAGAACGAGGACGCCTGAAGGAAGAGCTGGAA < 41bp 1 0.46734099073013 1 0.55550354719162 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042671 synonymous SNV . 0 11 hm5C_associated_SNPs_37208 0 0 15 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr3 184042671 184042671 1 + G A STAD 184042684 + 184042664 184042704 41 AGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG AGGCAGAAGAACGAGGACGCCTGAAGGAAGAGCTGGAAGAG < 41bp 1 0.765862655781723 1 0.659600496292114 experiment 0.468274688436555 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042684 chr3:184042671 synonymous SNV . 0 8 hm5C_associated_SNPs_37209 0 0 15 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:184042660-184042680
64251 chr2 32958960 32958960 1 + C A STAD 32958943 + 32958923 32958963 41 CTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGT CTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGATGT < 41bp 1 0.537904805047645 1 0.457980573177338 experiment 0.92419038990471 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32958943 chr2:32958960 stopgain 0.995 1 38 hm5C_associated_SNPs_37210 0 0 1 BUD13 POSTAR2 ENCODE chr2:32958956-32958988
64251 chr7 87530094 87530094 1 + C T STAD 87530114 + 87530094 87530134 41 CGATAAGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAG TGATAAGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAG < 41bp 1 0.158421777636615 1 0.324806183576584 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530114 chr7:87530094 synonymous SNV . 0 1 hm5C_associated_SNPs_37211 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:87530081-87530102
64251 chr8 121468864 121468864 1 + A G STAD 121468848 + 121468828 121468868 41 ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGACTCA ATGTTGTATCTTTAGAAGATCTCAGAAATGTTATTGGCTCA < 41bp 1 0.393841696175647 1 0.186857551336288 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTBP ENSG00000172167 CDS Human protein_coding chr8:121468848 chr8:121468864 nonsynonymous SNV 0.970 2 37 hm5C_associated_SNPs_37217 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr8:121468847-121468872
64251 chr16 30990970 30990970 1 + G A STAD 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCGGACGAGGCCGAGCACCCTAGGCCCCTGCT < 41bp 1 0.23396954207883 1 0.559093475341797 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990970 nonsynonymous SNV 0.011 2 26 hm5C_associated_SNPs_37218 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:30990952-30990990
64251 chr2 85852703 85852703 1 + C T STAD 85852718 + 85852698 85852738 41 GCAAACTTGGACAAGCAAGCCAAATTGTCCCGGGCATATGA GCAAATTTGGACAAGCAAGCCAAATTGTCCCGGGCATATGA < 41bp 1 0.395062257155564 1 0.142891228199005 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP39 ENSG00000168883 CDS Human protein_coding chr2:85852718 chr2:85852703 synonymous SNV . 0 6 hm5C_associated_SNPs_37220 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:85852678-85852712
64251 chr19 47111779 47111779 1 + G T STAD 47111772 + 47111752 47111792 41 TGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGA TGACTTCCCGGAGTTCCTGACCATGATTGCCAGAAAGATGA < 41bp 1 0.0823294975374982 1 0.0408437252044678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111772 chr19:47111779 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_37222 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111779 47111779 1 + G T STAD 47111782 + 47111762 47111802 41 GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGA GAGTTCCTGACCATGATTGCCAGAAAGATGAAGGACACAGA < 41bp 1 0.661968276105775 1 0.662064075469971 experiment 0.676063447788449 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111782 chr19:47111779 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_37223 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111779 47111779 1 + G T STAD 47111797 + 47111777 47111817 41 ATGGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGAT ATTGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGAT < 41bp 1 0.363236284140597 1 0.0877914130687714 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111797 chr19:47111779 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_37224 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr19 47111779 47111779 1 + G T STAD 47111799 + 47111779 47111819 41 GGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGATCC TGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGATCC < 41bp 1 0.333642545182367 1 0.230345159769058 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111799 chr19:47111779 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_37225 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:47111740-47111780
64251 chr10 103919661 103919661 1 + A G STAD 103919665 + 103919645 103919685 41 TTAAACAGGTCCCTACAGTTCAGTCCCCCCGCCTTCTGCTC TTAAACAGGTCCCTACGGTTCAGTCCCCCCGCCTTCTGCTC < 41bp 1 0.266110476642259 1 0.132087856531143 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919665 chr10:103919661 nonsynonymous SNV 0.940 4 17 hm5C_associated_SNPs_37226 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:103919658-103919683
64251 chr17 35413944 35413944 1 + G A STAD 35413929 + 35413909 35413949 41 TGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCGACGAA TGTACCGCTCTCTTTTTGGCCAGCTCCACCCTCCCAACGAA < 41bp 1 0.344300138865872 1 0.412762731313705 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AATF ENSG00000108270 CDS Human other chr17:35413929 chr17:35413944 nonsynonymous SNV 0.001 0 36 hm5C_associated_SNPs_37227 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35413908-35413944
64251 chr21 45560144 45560144 1 + C T STAD 45560135 + 45560115 45560155 41 CTTTTGTCTCCCGGTAGGAGCACGTTTGCCGTGGACGGGAA CTTTTGTCTCCCGGTAGGAGCACGTTTGCTGTGGACGGGAA < 41bp 1 0.534712903973615 1 0.371767103672028 experiment 0.930574192052771 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560135 chr21:45560144 synonymous SNV . 0 30 hm5C_associated_SNPs_37230 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:45560131-45560153
64251 chr5 231070 231070 1 + G T STAD 231073 + 231053 231093 41 CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAG CCATGATCACCAGGGCATGCCTTCCTTGCCAGGACCTAGAG < 41bp 1 0.299999533712126 1 0.214537382125854 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:231073 chr5:231070 nonsynonymous SNV 0.897 3 18 hm5C_associated_SNPs_37231 0 0 4 RPS3 POSTAR2 ENCODE chr5:230990-231097
64251 chr21 45217944 45217944 1 + C T STAD 45217948 + 45217928 45217968 41 GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG GTGGTGAGCGTGGAGATGCGCTGTCCCAGAAGAGGTCTGAG < 41bp 1 0.224835472110759 1 0.284418165683746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217948 chr21:45217944 synonymous SNV . 0 17 hm5C_associated_SNPs_37234 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr21:45217931-45217957
64251 chr21 45217944 45217944 1 + C T STAD 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG TGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG < 41bp 1 0.693870276674606 1 0.213148474693298 experiment 0.612259446650788 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217944 synonymous SNV . 0 1 hm5C_associated_SNPs_37235 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr21:45217931-45217957
64251 chr17 64685129 64685129 1 + C T STAD 64685113 + 64685093 64685133 41 AGGTGAGTACTACAACGTACCCATTCCGGAAGGGGACGAGG AGGTGAGTACTACAACGTACCCATTCCGGAAGGGGATGAGG < 41bp 1 0.016016028610823 1 0.0277039110660553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64685113 chr17:64685129 synonymous SNV . 0 37 hm5C_associated_SNPs_37236 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:64685120-64685140
64251 chr1 94964197 94964197 1 + G A STAD 94964179 + 94964159 94964199 41 TTCGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC TTCGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATAGC < 41bp 1 0.503551468148848 1 0.238756865262985 experiment 0.992897063702305 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94964179 chr1:94964197 nonsynonymous SNV 0.998 5 39 hm5C_associated_SNPs_37239 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:94964180-94964202
64251 chr17 48631744 48631744 1 + G A STAD 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCATCG < 41bp 1 0.0425861914768332 1 0.0114866495132446 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631744 nonsynonymous SNV 0.936 0 38 hm5C_associated_SNPs_37241 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr1 36026175 36026175 1 + G C STAD 36026179 + 36026159 36026199 41 TCCTCACAGCCCGGGGGGACCCGGACGATGCTGCCCGCCGC TCCTCACAGCCCGGGGCGACCCGGACGATGCTGCCCGCCGC < 41bp 1 0.781993471463704 1 0.853997826576233 experiment 0.436013057072591 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026179 chr1:36026175 synonymous SNV . 0 17 hm5C_associated_SNPs_37242 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:36026149-36026182
64251 chr2 32773057 32773057 1 + G C STAD 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGACGAACAT < 41bp 1 0.195118420863802 1 0.701326549053192 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773057 nonsynonymous SNV 0.979 3 35 hm5C_associated_SNPs_37244 0 0 1 PPIG POSTAR2 ENCODE chr2:32773049-32773076
64251 chr1 113241043 113241043 1 + G A STAD 113241053 + 113241033 113241073 41 CCTCCAAGAAGGGCAAAGCTCGCCTGAGCCCTCGAAGTGTG CCTCCAAGAAAGGCAAAGCTCGCCTGAGCCCTCGAAGTGTG < 41bp 1 0.659998975105092 1 0.163508981466293 experiment 0.680002049789817 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MOV10 ENSG00000155363 CDS Human protein_coding chr1:113241053 chr1:113241043 synonymous SNV . 0 11 hm5C_associated_SNPs_37245 0 0 3 GRWD1 POSTAR2 ENCODE chr1:113241006-113241073
64251 chr1 24996760 24996760 1 + C T STAD 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACCGTCTACAAACTGGTCACCAGCTGTACTGGTCAAAAAGG < 41bp 1 0.479260065513382 1 0.559412240982056 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996760 nonsynonymous SNV 0.955 2 30 hm5C_associated_SNPs_37246 0 0 1 TRA2A POSTAR2 ENCODE chr1:24996753-24996806
64251 chr12 109547639 109547639 1 + G A STAD 109547637 + 109547617 109547657 41 TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAGACG TTCTTGATCTTTTTCAGAAGCGACACCATGTACTACAGACG < 41bp 1 0.432717636920497 1 0.370968371629715 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547637 chr12:109547639 synonymous SNV . 0 23 hm5C_associated_SNPs_37247 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr1 41475868 41475868 1 + C A STAD 41475860 + 41475840 41475880 41 TATAGTGACAGGAGTGGAAGCAGCTCCCCTGACTCTGAAAT TATAGTGACAGGAGTGGAAGCAGCTCCCATGACTCTGAAAT < 41bp 1 0.334292721788256 1 0.811001420021057 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41475860 chr1:41475868 nonsynonymous SNV 0.998 4 29 hm5C_associated_SNPs_37249 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41475827-41475909
64251 chr10 104160788 104160788 1 + C T STAD 104160790 + 104160770 104160810 41 GGGTACCCGACCCTCACCCGCCTCCTTCTGAAGGCTGGTCA GGGTACCCGACCCTCACCTGCCTCCTTCTGAAGGCTGGTCA < 41bp 1 0.0492588443622699 1 0.0797241032123566 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160790 chr10:104160788 nonsynonymous SNV 0.931 2 19 hm5C_associated_SNPs_37250 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:104160757-104160788
64251 chr17 37075003 37075003 1 + T C STAD 37075006 + 37074986 37075026 41 CGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA CGGCGACACGGGGATGCCGCCGGCCAACTACGTGGAGGCCA < 41bp 1 0.562590752891973 1 0.778360366821289 experiment 0.874818494216055 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37075006 chr17:37075003 nonsynonymous SNV 0.996 3 18 hm5C_associated_SNPs_37251 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37075000-37075020
64251 chr19 50285894 50285894 1 + G C STAD 50285882 + 50285862 50285902 41 TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCCC TGACCTGGCCAGCCGCAACCCCACCTTCATGTCCCTGGCCC < 41bp 1 0.254011135070828 1 0.232338100671768 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285882 chr19:50285894 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_37252 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50285888-50285911
64251 chr2 242695360 242695360 1 + G A STAD 242695362 + 242695342 242695382 41 CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC CCTGTGGAGCGGCTCTACAACATCGTGACTGACCTGCGCGC < 41bp 1 0.625089110895251 1 0.194612354040146 experiment 0.749821778209499 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695362 chr2:242695360 nonsynonymous SNV 0.048 0 19 hm5C_associated_SNPs_37254 0 0 3 GRWD1 POSTAR2 ENCODE chr2:242695332-242695422
64251 chr10 103919306 103919306 1 + A C STAD 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGACGAGGAAGAGGAGCAAAAAAACCCCATGAAAAAT < 41bp 1 0.525123513022072 1 0.467539638280869 experiment 0.949752973955856 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919306 nonsynonymous SNV 0.467 2 29 hm5C_associated_SNPs_37255 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:103919264-103919312
64251 chr5 92923699 92923699 1 + C T STAD 92923717 + 92923697 92923737 41 AACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT AATGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT < 41bp 1 0.370597391495446 1 0.370802104473114 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923717 chr5:92923699 synonymous SNV . 0 3 hm5C_associated_SNPs_37256 0 0 1 RBM15 POSTAR2 ENCODE chr5:92923674-92923711
64251 chr4 53579473 53579473 1 + G C STAD 53579455 + 53579435 53579475 41 CCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTC CCAGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAACTC < 41bp 1 0.379777183521482 1 0.301655769348145 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579455 chr4:53579473 . . 0 39 hm5C_associated_SNPs_37259 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579457 + 53579437 53579477 41 AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAAGTCTC AGTGCTTTAAGAGGCTAACACAGAAGGGTAAAGTAACTCTC < 41bp 1 0.725335638183608 1 0.785508155822754 experiment 0.549328723632784 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579457 chr4:53579473 . . 0 37 hm5C_associated_SNPs_37260 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579475 + 53579455 53579495 41 CACAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGA CACAGAAGGGTAAAGTAACTCTCCATAAAACCCAGAGAAGA < 41bp 1 0.687985559422655 1 0.962897002696991 experiment 0.62402888115469 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579475 chr4:53579473 . . 0 19 hm5C_associated_SNPs_37261 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579477 + 53579457 53579497 41 CAGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGA CAGAAGGGTAAAGTAACTCTCCATAAAACCCAGAGAAGAGA < 41bp 1 0.145570586005972 1 0.152870982885361 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579477 chr4:53579473 . . 0 17 hm5C_associated_SNPs_37262 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579478 + 53579458 53579498 41 AGAAGGGTAAAGTAAGTCTCCATAAAACCCAGAGAAGAGAC AGAAGGGTAAAGTAACTCTCCATAAAACCCAGAGAAGAGAC < 41bp 1 0.274528943030709 1 0.20136097073555 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579478 chr4:53579473 . . 0 16 hm5C_associated_SNPs_37263 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579485 + 53579465 53579505 41 TAAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAG TAAAGTAACTCTCCATAAAACCCAGAGAAGAGACTGGAAAG < 41bp 1 0.290117636397595 1 0.13501387834549 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579485 chr4:53579473 . . 0 9 hm5C_associated_SNPs_37264 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579486 + 53579466 53579506 41 AAAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGC AAAGTAACTCTCCATAAAACCCAGAGAAGAGACTGGAAAGC < 41bp 1 0.470901960180106 1 0.2088742852211 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579486 chr4:53579473 . . 0 8 hm5C_associated_SNPs_37265 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr4 53579473 53579473 1 + G C STAD 53579487 + 53579467 53579507 41 AAGTAAGTCTCCATAAAACCCAGAGAAGAGACTGGAAAGCT AAGTAACTCTCCATAAAACCCAGAGAAGAGACTGGAAAGCT < 41bp 1 0.375152705981519 1 0.461212545633316 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA26 ENSG00000212588 ncRNA_exonic Human snoRNA chr4:53579487 chr4:53579473 . . 0 7 hm5C_associated_SNPs_37266 0 0 36 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:53579400-53579480
64251 chr19 18545051 18545051 1 + G A STAD 18545070 + 18545050 18545090 41 CGTGTGATGGGGCGGCAGCCCCGGGCCTCTCTGCGGGCCTA CATGTGATGGGGCGGCAGCCCCGGGCCTCTCTGCGGGCCTA < 41bp 1 0.733453586248097 1 0.666930079460144 experiment 0.533092827503805 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18545070 chr19:18545051 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_37268 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18544990-18545055
64251 chr21 45544600 45544600 1 + G A STAD 45544584 + 45544564 45544604 41 AAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACGCCAT AAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACACCAT < 41bp 1 0.242870672307657 1 0.147067457437515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45544584 chr21:45544600 nonsynonymous SNV 0.983 4 37 hm5C_associated_SNPs_37270 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr21:45544560-45544602
64251 chr11 988612 988612 1 + C T STAD 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACTGC < 41bp 1 0.693726418689169 1 0.404895514249802 experiment 0.612547162621661 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988612 nonsynonymous SNV 0.997 4 39 hm5C_associated_SNPs_37271 0 0 6 BUD13 POSTAR2 ENCODE chr11:988519-988630
64251 chr2 241533993 241533993 1 + A G STAD 241533998 + 241533978 241534018 41 GGTAGATGCAGCGGTAGCATCTGAGCTCCTGTCCCAGCTCC GGTAGATGCAGCGGTGGCATCTGAGCTCCTGTCCCAGCTCC < 41bp 1 0.79394465975364 1 0.820061564445496 experiment 0.41211068049272 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241533998 chr2:241533993 synonymous SNV . 0 16 hm5C_associated_SNPs_37273 0 0 5 BUD13 POSTAR2 ENCODE chr2:241533957-241534015
64251 chrX 100668147 100668147 1 + G A STAD 100668159 + 100668139 100668179 41 GTGGTGGCGCTTATGGTAGCCAAATGATGGGAGGGATGGGC GTGGTGGCACTTATGGTAGCCAAATGATGGGAGGGATGGGC < 41bp 1 0.467865498958921 1 0.779251337051392 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668159 chrX:100668147 nonsynonymous SNV 0.999 2 9 hm5C_associated_SNPs_37274 1 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:100668059-100668154
64251 chr5 14280525 14280525 1 + C A STAD 14280517 + 14280497 14280537 41 GACAGGAGGATCTCAGGAGACTCATTTCCTATCTAGCCTGT GACAGGAGGATCTCAGGAGACTCATTTCATATCTAGCCTGT < 41bp 1 0.289232929873744 1 0.0913501381874084 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14280517 chr5:14280525 synonymous SNV . 0 29 hm5C_associated_SNPs_37275 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr5 156819995 156819995 1 + C T STAD 156819998 + 156819978 156820018 41 CATCCACCAGTCCTTGGCCACCACTTGCTAAGCAGAAGATC CATCCACCAGTCCTTGGTCACCACTTGCTAAGCAGAAGATC < 41bp 1 0.117943298058438 1 0.112164825201035 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156819998 chr5:156819995 nonsynonymous SNV 0.999 3 18 hm5C_associated_SNPs_37276 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr5:156819969-156820012
64251 chr17 37650838 37650838 1 + A G STAD 37650826 + 37650806 37650846 41 CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGCCATTCG CTAGACAATGAGAAAGAGGGCTTCCCAATCACGGCCATTCG < 41bp 1 0.0580007628709999 1 0.060857743024826 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37650826 chr17:37650838 synonymous SNV . 0 33 hm5C_associated_SNPs_37279 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:37650800-37650838
64251 chr20 32439984 32439984 1 + C A STAD 32439982 + 32439962 32440002 41 CAGTCCCTCTACCAAATGTTCCCTCTATAGCCCTACCATCA CAGTCCCTCTACCAAATGTTCCATCTATAGCCCTACCATCA < 41bp 1 0.0415349097476653 1 0.0762052536010742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32439982 chr20:32439984 synonymous SNV . 0 23 hm5C_associated_SNPs_37280 0 0 5 GRWD1 POSTAR2 ENCODE chr20:32439971-32440009
64251 chr20 32439984 32439984 1 + C A STAD 32439983 + 32439963 32440003 41 AGTCCCTCTACCAAATGTTCCCTCTATAGCCCTACCATCAA AGTCCCTCTACCAAATGTTCCATCTATAGCCCTACCATCAA < 41bp 1 0.151670445928184 1 0.0385763049125671 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32439983 chr20:32439984 synonymous SNV . 0 22 hm5C_associated_SNPs_37281 0 0 5 GRWD1 POSTAR2 ENCODE chr20:32439971-32440009
64251 chr10 105048249 105048249 1 + C A STAD 105048230 + 105048210 105048250 41 ACCTAGAATCCTCAGTGCTACAACCTCCAAAGTCTCATCCA ACCTAGAATCCTCAGTGCTACAACCTCCAAAGTCTCATCAA < 41bp 1 0.322941049509671 1 0.238584041595459 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INA ENSG00000148798 CDS Human protein_coding chr10:105048230 chr10:105048249 synonymous SNV . 0 40 hm5C_associated_SNPs_37282 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr10:105048238-105048260
64251 chr11 57575890 57575890 1 + G A STAD 57575904 + 57575884 57575924 41 CTCTGCGTCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC CTCTGCATCAAGAGAAGGCTCTTTCTGCCATAGCTGACCTC < 41bp 1 0.0919659813626004 1 0.0578905940055847 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575904 chr11:57575890 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_37283 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57575863-57575903
64251 chr7 4830444 4830444 1 + T C STAD 4830446 + 4830426 4830466 41 TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCGTGC TGCTGCCCTGCCCAGGTGCCCCCCCCAGGTGGTCACCGTGC < 41bp 1 0.0875202119682721 1 0.0321706831455231 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830446 chr7:4830444 synonymous SNV . 0 19 hm5C_associated_SNPs_37285 0 0 1 PPIG POSTAR2 ENCODE chr7:4830390-4830462
64251 chr2 216214270 216214270 1 + G A STAD 216214285 + 216214265 216214305 41 GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA GTGGCATACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA < 41bp 1 0.731898383087542 1 0.278959274291992 experiment 0.536203233824916 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216214285 chr2:216214270 synonymous SNV . 0 6 hm5C_associated_SNPs_37293 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:216214260-216214280
64251 chr2 27662650 27662650 1 + C T STAD 27662638 + 27662618 27662658 41 TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGCCTGCAGTC TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGTCTGCAGTC < 41bp 1 0.0542884606596107 1 0.0514860153198242 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27662638 chr2:27662650 synonymous SNV . 0 33 hm5C_associated_SNPs_37295 0 0 4 BUD13 POSTAR2 ENCODE chr2:27662636-27662677
64251 chr11 118344459 118344459 1 + G A STAD 118344450 + 118344430 118344470 41 CAAGGCCCCCGAGGAGCTGTCCAAAGATCGAGATGCTGACA CAAGGCCCCCGAGGAGCTGTCCAAAGATCAAGATGCTGACA < 41bp 1 0.165120530320166 1 0.100528955459595 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344450 chr11:118344459 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_37296 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr11 118344459 118344459 1 + G A STAD 118344469 + 118344449 118344489 41 TCCAAAGATCGAGATGCTGACAAGAGCGTGGAGAAGGACAA TCCAAAGATCAAGATGCTGACAAGAGCGTGGAGAAGGACAA < 41bp 1 0.498485861789432 1 0.431705594062805 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344469 chr11:118344459 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_37297 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr11 118344459 118344459 1 + G A STAD 118344475 + 118344455 118344495 41 GATCGAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAG GATCAAGATGCTGACAAGAGCGTGGAGAAGGACAAGAGTAG < 41bp 1 0.255351621222038 1 0.54785680770874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344475 chr11:118344459 nonsynonymous SNV 1.000 0 5 hm5C_associated_SNPs_37298 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118344448-118344476
64251 chr10 102798404 102798404 1 + G A STAD 102798423 + 102798403 102798443 41 CGCCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG CACCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG < 41bp 1 0.177964196370721 1 0.454743146896362 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN3 ENSG00000107819 CDS Human protein_coding chr10:102798423 chr10:102798404 nonsynonymous SNV 0.996 0 2 hm5C_associated_SNPs_37299 0 0 5 BUD13 POSTAR2 ENCODE chr10:102798348-102798433
64251 chr22 24236713 24236713 1 + G T STAD 24236718 + 24236698 24236738 41 GCCTCCGTGCCGGACGGGTTCCTCTCCGAGCTCACCCAGCA GCCTCCGTGCCGGACTGGTTCCTCTCCGAGCTCACCCAGCA < 41bp 1 0.142710720749447 1 0.0452825427055359 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIF ENSG00000240972 CDS Human protein_coding chr22:24236718 chr22:24236713 nonsynonymous SNV 0.982 3 16 hm5C_associated_SNPs_37300 0 0 39 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:24236560-24236740
64251 chr1 977059 977059 1 + G A STAD 977045 + 977025 977065 41 GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCGCTCCGG GGGGCCGCCCGGGGTCTCCTCCTGCAGAAAGTGCACTCCGG < 41bp 1 0.0956560707581162 1 0.464259535074234 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:977045 chr1:977059 nonsynonymous SNV 0.948 1 35 hm5C_associated_SNPs_37301 0 0 5 FXR2 POSTAR2 ENCODE chr1:977048-977074
64251 chr1 26135608 26135608 1 + C A STAD 26135615 + 26135595 26135635 41 GCCTGCCTGACTGCCATCAGCGACTTCTACTACACTGTGAT GCCTGCCTGACTGACATCAGCGACTTCTACTACACTGTGAT < 41bp 1 0.222940250075601 1 0.110582321882248 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26135615 chr1:26135608 nonsynonymous SNV 0.623 5 14 hm5C_associated_SNPs_37302 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:26135599-26135631
64251 chr2 184023068 184023068 1 + A T STAD 184023063 + 184023043 184023083 41 TTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAG TTATCAATCTAAACTGCAGGCTCGGTAAGCCTTAAGCAAAG < 41bp 1 0.72397466823575 1 0.288871109485626 experiment 0.552050663528501 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP35 ENSG00000163002 CDS Human protein_coding chr2:184023063 chr2:184023068 stopgain 0.998 1 26 hm5C_associated_SNPs_37303 0 0 1 PPIG POSTAR2 ENCODE chr2:184023051-184023132
64251 chr14 37739664 37739664 1 + A C STAD 37739679 + 37739659 37739699 41 AGAGAAAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA AGAGACAACTAAAGTTTAAGCTGGAACTCCAAGAGAAAGAA < 41bp 1 0.636101751516265 1 0.439152777194977 experiment 0.727796496967471 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37739679 chr14:37739664 nonsynonymous SNV 0.998 0 6 hm5C_associated_SNPs_37304 0 0 6 FBL POSTAR2 GSE43666,GSM1067864 chr14:37739640-37739678
64251 chr15 90159667 90159667 1 + C T STAD 90159672 + 90159652 90159692 41 GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCT GACTAAGAGTGTGGCTGAGACTCCAGTGCATAAGCAGATCT < 41bp 1 0.762240066613454 1 0.908434569835663 experiment 0.475519866773092 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90159672 chr15:90159667 synonymous SNV . 0 16 hm5C_associated_SNPs_37305 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:90159636-90159691
64251 chr9 139749902 139749902 1 + G A STAD 139749893 + 139749873 139749913 41 GCCCCCACAGAGGTGTCCACCCTGCAGCCGCTGCCTCCTGG GCCCCCACAGAGGTGTCCACCCTGCAGCCACTGCCTCCTGG < 41bp 1 0.0755609008118183 1 0.413055688142776 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139749893 chr9:139749902 synonymous SNV . 0 30 hm5C_associated_SNPs_37306 0 0 3 BUD13 POSTAR2 ENCODE chr9:139749883-139749907
64251 chr5 179150668 179150668 1 + T C STAD 179150661 + 179150641 179150681 41 AGCCCTGTCTTGTTTTTCAGCCAGGCGTTGTGGGGCAGATG AGCCCTGTCTTGTTTTTCAGCCAGGCGCTGTGGGGCAGATG < 41bp 1 0.442034113403598 1 0.469599336385727 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179150661 chr5:179150668 nonsynonymous SNV 0.016 2 28 hm5C_associated_SNPs_37307 0 0 39 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr5 179150668 179150668 1 + T C STAD 179150666 + 179150646 179150686 41 TGTCTTGTTTTTCAGCCAGGCGTTGTGGGGCAGATGATCGA TGTCTTGTTTTTCAGCCAGGCGCTGTGGGGCAGATGATCGA < 41bp 1 0.520394519961639 1 0.325943529605865 experiment 0.959210960076722 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179150666 chr5:179150668 nonsynonymous SNV 0.016 2 23 hm5C_associated_SNPs_37308 0 0 39 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr5 179150668 179150668 1 + T C STAD 179150676 + 179150656 179150696 41 TTCAGCCAGGCGTTGTGGGGCAGATGATCGAGGCAGCTGAA TTCAGCCAGGCGCTGTGGGGCAGATGATCGAGGCAGCTGAA < 41bp 1 0.490651640247728 1 0.436599522829056 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179150676 chr5:179150668 nonsynonymous SNV 0.016 2 13 hm5C_associated_SNPs_37309 0 0 39 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:179150611-179150670
64251 chr3 127335932 127335932 1 + G T STAD 127335929 + 127335909 127335949 41 GGGCCCTGGTTCTGGCTGACCGAGGAGTGTGTCTCATTGAT GGGCCCTGGTTCTGGCTGACCGATGAGTGTGTCTCATTGAT < 41bp 1 0.320822969011091 1 0.385497808456421 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127335929 chr3:127335932 stopgain 0.896 1 24 hm5C_associated_SNPs_37310 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr3:127335895-127335947
64251 chr11 61488196 61488196 1 + G A STAD 61488204 + 61488184 61488224 41 GGTCTATAACCCGCACGAGGCCTGCTCCCTGAACCTGGTGG GGTCTATAACCCACACGAGGCCTGCTCCCTGAACCTGGTGG < 41bp 1 0.0345224383990205 1 0.0208265483379364 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61488204 chr11:61488196 synonymous SNV . 0 13 hm5C_associated_SNPs_37311 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61488172-61488196
64251 chr19 49993758 49993758 1 + C T STAD 49993749 + 49993729 49993769 41 TAGTGAAGTACCTGGCTTTCCTCCGCAAGCGGATGAACACC TAGTGAAGTACCTGGCTTTCCTCCGCAAGTGGATGAACACC < 41bp 1 0.764482775166869 1 0.24812051653862 experiment 0.471034449666262 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993749 chr19:49993758 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_37312 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr13 113729379 113729379 1 + C T STAD 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCACTACGTGGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.683457305546137 1 0.931654214859009 experiment 0.633085388907726 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729379 nonsynonymous SNV 0.403 4 14 hm5C_associated_SNPs_37313 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chr1 39823348 39823348 1 + G A STAD 39823346 + 39823326 39823366 41 AACATGCATAAGGGAGGCAGCAGCCCCGAGACCCTTCCCTC AACATGCATAAGGGAGGCAGCAACCCCGAGACCCTTCCCTC < 41bp 1 0.111081129391605 1 0.159772992134094 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39823346 chr1:39823348 nonsynonymous SNV 0.670 0 23 hm5C_associated_SNPs_37314 0 0 11 BUD13 POSTAR2 ENCODE chr1:39823348-39823373
64251 chr11 9451349 9451349 1 + A G STAD 9451359 + 9451339 9451379 41 TGAAGAAGTTACTCCTATTGCAGTAGAAATGACACAACATT TGAAGAAGTTGCTCCTATTGCAGTAGAAATGACACAACATT < 41bp 1 0.598137048207831 1 0.629086375236511 experiment 0.803725903584337 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9451359 chr11:9451349 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_37315 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9451254-9451355
64251 chr6 31713067 31713067 1 + G A STAD 31713049 + 31713029 31713069 41 TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGCCAGTG TAAGAGTGAGTCTCACCCCTCAGTGTACAAAGTGGCCAATG < 41bp 1 0.356184528147775 1 0.373444795608521 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MSH5 ENSG00000204410;ENSG00000255152 CDS Human other chr6:31713049 chr6:31713067 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_37316 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:31713059-31713092
64251 chr9 134354725 134354725 1 + C T STAD 134354717 + 134354697 134354737 41 AGAACAACTTATGTCTGGAGCAAGGTGACGTGACCGTGCCT AGAACAACTTATGTCTGGAGCAAGGTGATGTGACCGTGCCT < 41bp 1 0.324532230207404 1 0.773211240768433 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354717 chr9:134354725 synonymous SNV . 0 29 hm5C_associated_SNPs_37317 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr9 134354725 134354725 1 + C T STAD 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GATGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG < 41bp 1 0.309619797565235 1 0.621980965137482 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354725 synonymous SNV . 0 3 hm5C_associated_SNPs_37318 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr5 149925026 149925026 1 + A G STAD 149925006 + 149924986 149925026 41 CCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGA CCCAAAGCCAAGGTCCTGACCATCCTCATCAACCCCGCGGG < 41bp 1 0.147436076243773 1 0.0428634285926819 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDST1 ENSG00000070614 CDS Human protein_coding chr5:149925006 chr5:149925026 nonsynonymous SNV 0.995 4 41 hm5C_associated_SNPs_37319 0 0 3 EFTUD2 POSTAR2 ENCODE chr5:149925018-149925085
64251 chr6 15496729 15496729 1 + C T STAD 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGTGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT < 41bp 1 0.0742527494618403 1 0.202493488788605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496729 nonsynonymous SNV 1.000 5 4 hm5C_associated_SNPs_37320 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr7 100732016 100732016 1 + A C STAD 100732032 + 100732012 100732052 41 GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC GCCCCGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC < 41bp 1 0.249698302328079 1 0.285668909549713 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732032 chr7:100732016 nonsynonymous SNV 0.975 2 5 hm5C_associated_SNPs_37321 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731995-100732033
64251 chr7 4823848 4823848 1 + C T STAD 4823834 + 4823814 4823854 41 CCTGCCTGTCCTTCCCACAGCCGGGCCCCGTCACCGAGGTG CCTGCCTGTCCTTCCCACAGCCGGGCCCCGTCACTGAGGTG < 41bp 1 0.336643966821656 1 0.653359055519104 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4823834 chr7:4823848 synonymous SNV . 0 35 hm5C_associated_SNPs_37322 0 0 2 BUD13 POSTAR2 ENCODE chr7:4823826-4823863
64251 chr1 228879181 228879181 1 + C T STAD 228879178 + 228879158 228879198 41 CACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGCAGTC CACTGTCCCAAAGCCCCCATCATTCTAGTTGGAACGCAGTC < 41bp 1 0.0452515047644708 1 0.183845072984695 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOU ENSG00000116574 CDS Human protein_coding chr1:228879178 chr1:228879181 synonymous SNV . 0 24 hm5C_associated_SNPs_37323 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:228879159-228879185
64251 chr16 67662336 67662336 1 + T C STAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACCGCG < 41bp 1 0.29678051348307 1 0.110505312681198 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662336 nonsynonymous SNV 1.000 5 38 hm5C_associated_SNPs_37324 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr1 12061540 12061540 1 + G A STAD 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCCAGGCCGGGGACCACATCTTCTTTGTGTCTGCTAAGGA < 41bp 1 0.307612318663909 1 0.232191234827042 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061540 nonsynonymous SNV 0.943 2 17 hm5C_associated_SNPs_37328 0 0 1 FXR2 POSTAR2 ENCODE chr1:12061494-12061561
64251 chr12 95694231 95694231 1 + A G STAD 95694232 + 95694212 95694252 41 AGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCA AGCAGATGGAAGTGGTCTGGCCACTGCCCCTCCAACTCCCA < 41bp 1 0.335756206608126 1 0.0747506022453308 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95694232 chr12:95694231 nonsynonymous SNV 0.001 0 20 hm5C_associated_SNPs_37329 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:95694220-95694240
64251 chr17 55191844 55191844 1 + G A STAD 55191830 + 55191810 55191850 41 CCCTCTACAGCTCATGCTGCCTGATGGCATCACCGTGGAGG CCCTCTACAGCTCATGCTGCCTGATGGCATCACCATGGAGG < 41bp 1 0.23091773814871 1 0.121356278657913 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191830 chr17:55191844 nonsynonymous SNV 0.995 4 35 hm5C_associated_SNPs_37331 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:55191844-55191870
64251 chr16 68104958 68104958 1 + C T STAD 68104973 + 68104953 68104993 41 TCTTCCTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG TCTTCTTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG < 41bp 1 0.223967672391383 1 0.536414206027985 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104973 chr16:68104958 nonsynonymous SNV 0.993 2 6 hm5C_associated_SNPs_37332 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:68104931-68104963
64251 chr14 102466418 102466418 1 + G A STAD 102466414 + 102466394 102466434 41 GGACGACAGAGAGAAGTGTGCAAAGGCCAAGGAGGCGCTGG GGACGACAGAGAGAAGTGTGCAAAAGCCAAGGAGGCGCTGG < 41bp 1 0.292567612810829 1 0.453779608011246 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466414 chr14:102466418 synonymous SNV . 0 25 hm5C_associated_SNPs_37333 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466392-102466437
64251 chr6 43110015 43110015 1 + G A STAD 43110021 + 43110001 43110041 41 AACATCAAGCACACGGAGGCCCCCCTCTATGTCGTGGGTAT AACATCAAGCACACAGAGGCCCCCCTCTATGTCGTGGGTAT < 41bp 1 0.0643036436261593 1 0.0610034763813019 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK7 ENSG00000112655 CDS Human protein_coding chr6:43110021 chr6:43110015 synonymous SNV . 0 15 hm5C_associated_SNPs_37334 0 0 1 SND1 POSTAR2 ENCODE chr6:43110002-43110037
64251 chr16 30990956 30990956 1 + G A STAD 30990965 + 30990945 30990985 41 ACAGAGACATCGGACGAGGCCGAGCGCCCTAGGCCCCTGCT ACAGAGACATCAGACGAGGCCGAGCGCCCTAGGCCCCTGCT < 41bp 1 0.257671577157773 1 0.678057551383972 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990965 chr16:30990956 synonymous SNV . 0 12 hm5C_associated_SNPs_37335 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:30990922-30990957
64251 chr8 145139196 145139196 1 + G T STAD 145139185 + 145139165 145139205 41 CTTGACCTGCTCAATCTCTTCCAGACCTTCTGCCAGAAAGG CTTGACCTGCTCAATCTCTTCCAGACCTTCTTCCAGAAAGG < 41bp 1 0.555916207986288 1 0.265614032745361 experiment 0.888167584027424 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139185 chr8:145139196 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_37340 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145139180-145139200
64251 chr17 29560174 29560174 1 + T G STAD 29560175 + 29560155 29560195 41 TGGTCACAATGATGGGTGATCAAGGAGAACTCCCTATAGCG TGGTCACAATGATGGGTGAGCAAGGAGAACTCCCTATAGCG < 41bp 1 0.391118394905159 1 0.61098700761795 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29560175 chr17:29560174 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_37342 1 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:29560145-29560181
64251 chr7 99702536 99702536 1 + C A STAD 99702547 + 99702527 99702567 41 GAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA GAGATTCGGATCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA < 41bp 1 0.0184870683157214 1 0.0386918783187866 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702547 chr7:99702536 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_37343 0 0 2 BUD13 POSTAR2 ENCODE chr7:99702493-99702553
64251 chr21 30715090 30715090 1 + G A STAD 30715106 + 30715086 30715126 41 TGTCGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAGAT TGTCATCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAGAT < 41bp 1 0.600217215329465 1 0.480631291866302 experiment 0.799565569341069 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715106 chr21:30715090 nonsynonymous SNV 0.129 1 5 hm5C_associated_SNPs_37344 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr3 9488801 9488801 1 + G A STAD 9488809 + 9488789 9488829 41 AAAGAAAGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAAC AAAGAAAGAAGCAGCGGGATCAGCCCTTGGAACAGAGCAAC < 41bp 1 0.296746685280123 1 0.50610214471817 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9488809 chr3:9488801 nonsynonymous SNV 0.984 5 13 hm5C_associated_SNPs_37345 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9488768-9488806
64251 chr14 50789395 50789395 1 + G A STAD 50789391 + 50789371 50789411 41 AAATACAAGATTCAGGCGATCGACGCCACCGACTCTTGTAT AAATACAAGATTCAGGCGATCGACACCACCGACTCTTGTAT < 41bp 1 0.744732698110233 1 0.435795247554779 experiment 0.510534603779534 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789391 chr14:50789395 nonsynonymous SNV 0.788 5 25 hm5C_associated_SNPs_37346 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr14 50789395 50789395 1 + G A STAD 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATTCAGGCGATCGACACCACCGACTCTTGTATCATGA < 41bp 1 0.0990432394347703 1 0.134363204240799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789395 nonsynonymous SNV 0.788 5 20 hm5C_associated_SNPs_37347 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr19 14561788 14561788 1 + C T STAD 14561797 + 14561777 14561817 41 GGGGAGCTGCCCGCCGACCACCCCAAGGGGCGGCTGCTGCG GGGGAGCTGCCTGCCGACCACCCCAAGGGGCGGCTGCTGCG < 41bp 1 0.611174380603881 1 0.711009442806244 experiment 0.777651238792238 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561797 chr19:14561788 synonymous SNV . 0 12 hm5C_associated_SNPs_37349 0 0 5 FXR2 POSTAR2 ENCODE chr19:14561732-14561810
64251 chr22 24717327 24717327 1 + C T STAD 24717339 + 24717319 24717359 41 AAAGATTACGTGAACGTACCCGATTAAACCAGAGCAAAAAA AAAGATTATGTGAACGTACCCGATTAAACCAGAGCAAAAAA < 41bp 1 0.0901592036699122 1 0.185070604085922 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPECC1L ENSG00000100014;ENSG00000258555 CDS Human other chr22:24717339 chr22:24717327 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_37350 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:24717288-24717332
64251 chr4 152024210 152024210 1 + T C STAD 152024223 + 152024203 152024243 41 AATGACTTGAAAGAAGTGGTCAATAAATTGTAAGTGTTTCT AATGACTCGAAAGAAGTGGTCAATAAATTGTAAGTGTTTCT < 41bp 1 0.317160273053573 1 0.109282195568085 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS3A ENSG00000145425 CDS Human protein_coding chr4:152024223 chr4:152024210 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_37351 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr4:152024202-152024236
64251 chr2 203157521 203157521 1 + C T STAD 203157511 + 203157491 203157531 41 TTATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCT TTATACTAGGTGATTGAAATCTCTGAATATTGAACCCAGCT < 41bp 1 0.440788470611257 1 0.495489686727524 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157511 chr2:203157521 stopgain 0.997 1 31 hm5C_associated_SNPs_37352 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:203157492-203157572
64251 chr19 10940910 10940910 1 + C T STAD 10940900 + 10940880 10940920 41 GGCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCC GGCCCCCCCTGATTCCTGTTCCCGTGGGGGTAGCAGCCTCC < 41bp 1 0.349268349986462 1 0.207382440567017 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940900 chr19:10940910 nonsynonymous SNV 0.020 1 31 hm5C_associated_SNPs_37353 0 0 5 FMR1 POSTAR2 ENCODE chr19:10940887-10940967
64251 chr19 10940910 10940910 1 + C T STAD 10940901 + 10940881 10940921 41 GCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCCT GCCCCCCCTGATTCCTGTTCCCGTGGGGGTAGCAGCCTCCT < 41bp 1 0.260286398598183 1 0.273776769638062 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940901 chr19:10940910 nonsynonymous SNV 0.020 1 30 hm5C_associated_SNPs_37354 0 0 5 FMR1 POSTAR2 ENCODE chr19:10940887-10940967
64251 chr19 54632444 54632444 1 + G A STAD 54632459 + 54632439 54632479 41 AGGACGCCTACCAGGAGGACCTGGGATTCAGCCTGGGCCAC AGGACACCTACCAGGAGGACCTGGGATTCAGCCTGGGCCAC < 41bp 1 0.75606021179773 1 0.723577558994293 experiment 0.487879576404541 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54632459 chr19:54632444 nonsynonymous SNV 0.974 3 6 hm5C_associated_SNPs_37355 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54632416-54632454
64251 chr3 52233281 52233281 1 + C T STAD 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGAGTGTTGTTCGCCGCTGTCCATTCTTATCCCGAGT < 41bp 1 0.163411850545844 1 0.238706797361374 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233281 synonymous SNV . 0 24 hm5C_associated_SNPs_37357 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52233243-52233288
64251 chr2 27302084 27302084 1 + C T STAD 27302064 + 27302044 27302084 41 GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCC GGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCT < 41bp 1 0.281711220743662 1 0.605294644832611 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302064 chr2:27302084 nonsynonymous SNV 0.474 4 41 hm5C_associated_SNPs_37358 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302084 27302084 1 + C T STAD 27302065 + 27302045 27302085 41 GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCG GCCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCTG < 41bp 1 0.661206594124799 1 0.753865957260132 experiment 0.677586811750402 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302065 chr2:27302084 nonsynonymous SNV 0.474 4 40 hm5C_associated_SNPs_37359 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr2 27302084 27302084 1 + C T STAD 27302066 + 27302046 27302086 41 CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCCGG CCCTCAGCCCCGGGGGGCCCCAGGCCCAGATTGCCCCCTGG < 41bp 1 0.606278341919771 1 0.84714686870575 experiment 0.787443316160459 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302066 chr2:27302084 nonsynonymous SNV 0.474 4 39 hm5C_associated_SNPs_37360 0 0 1 EIF3H POSTAR2 ENCODE chr2:27302060-27302099
64251 chr16 4902935 4902935 1 + G T STAD 4902930 + 4902910 4902950 41 TTGGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTC TTGGTAGCCATGTCGGAGCCCCACATGGTCCAGTTCACCTC < 41bp 1 0.333229796373156 1 0.180012047290802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN1 ENSG00000118900 CDS Human protein_coding chr16:4902930 chr16:4902935 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_37362 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:4902888-4902937
64251 chr3 37090086 37090086 1 + C T STAD 37090068 + 37090048 37090088 41 ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTCGA ATGTGCCCCCTTTGGAGGGACTGCCTATCTTCATTCTTTGA < 41bp 1 0.340295655963334 1 0.050257533788681 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MLH1 ENSG00000076242 CDS Human protein_coding chr3:37090068 chr3:37090086 stopgain 0.997 1 39 hm5C_associated_SNPs_37363 3 0 1 SND1 POSTAR2 ENCODE chr3:37090048-37090100
64251 chr19 47111800 47111800 1 + A C STAD 47111782 + 47111762 47111802 41 GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGA GAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACCGA < 41bp 1 0.630237589740977 1 0.79326319694519 experiment 0.739524820518045 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111782 chr19:47111800 synonymous SNV . 0 39 hm5C_associated_SNPs_37364 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:47111749-47111815
64251 chr19 47111800 47111800 1 + A C STAD 47111797 + 47111777 47111817 41 ATGGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGAT ATGGCCAGAAAGATGAAGGACACCGACAGTGAGGAGGAGAT < 41bp 1 0.380175929828127 1 0.0627744793891907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111797 chr19:47111800 synonymous SNV . 0 24 hm5C_associated_SNPs_37365 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:47111749-47111815
64251 chr19 47111800 47111800 1 + A C STAD 47111799 + 47111779 47111819 41 GGCCAGAAAGATGAAGGACACAGACAGTGAGGAGGAGATCC GGCCAGAAAGATGAAGGACACCGACAGTGAGGAGGAGATCC < 41bp 1 0.164655859868211 1 0.204160898923874 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111799 chr19:47111800 synonymous SNV . 0 22 hm5C_associated_SNPs_37366 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:47111749-47111815
64251 chr19 47111800 47111800 1 + A C STAD 47111803 + 47111783 47111823 41 AGAAAGATGAAGGACACAGACAGTGAGGAGGAGATCCGAGA AGAAAGATGAAGGACACCGACAGTGAGGAGGAGATCCGAGA < 41bp 1 0.453748359453662 1 0.422207713127136 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALM3 ENSG00000160014 CDS Human protein_coding chr19:47111803 chr19:47111800 synonymous SNV . 0 18 hm5C_associated_SNPs_37367 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:47111749-47111815
64251 chr21 48068520 48068520 1 + C T STAD 48068501 + 48068481 48068521 41 GGGACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCG GGGACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGTG < 41bp 1 0.509886891538154 1 0.108373701572418 experiment 0.980226216923693 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068501 chr21:48068520 nonsynonymous SNV 0.002 3 40 hm5C_associated_SNPs_37368 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr21 48068520 48068520 1 + C T STAD 48068504 + 48068484 48068524 41 ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCGGCC ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGTGGCC < 41bp 1 0.689090095546424 1 0.673458874225616 experiment 0.621819808907152 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068504 chr21:48068520 nonsynonymous SNV 0.002 3 37 hm5C_associated_SNPs_37369 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr10 71154810 71154810 1 + C T STAD 71154804 + 71154784 71154824 41 CCTCTTCCGAGGGCAGATCTCTGAGACGCTGAAGACCCGGG CCTCTTCCGAGGGCAGATCTCTGAGATGCTGAAGACCCGGG < 41bp 1 0.759006967651362 1 0.75306510925293 experiment 0.481986064697275 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HK1 ENSG00000156515 CDS Human protein_coding chr10:71154804 chr10:71154810 nonsynonymous SNV 0.995 3 27 hm5C_associated_SNPs_37371 0 0 2 FXR2 POSTAR2 ENCODE chr10:71154793-71154828
64251 chr11 812614 812614 1 + T G STAD 812631 + 812611 812651 41 TGCTGGTTCTGCCCCTGCTGCAGGTAAGTGGTGGCCTGGTG TGCGGGTTCTGCCCCTGCTGCAGGTAAGTGGTGGCCTGGTG < 41bp 1 0.721871646657564 1 0.798110485076904 experiment 0.556256706684872 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPLP2 ENSG00000177600 CDS Human protein_coding chr11:812631 chr11:812614 synonymous SNV . 0 4 hm5C_associated_SNPs_37372 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:812537-812618
64251 chr19 36218396 36218396 1 + C A STAD 36218408 + 36218388 36218428 41 CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAG CTGCGGACAGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAG < 41bp 1 0.567012629172501 1 0.308539509773254 experiment 0.865974741654998 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218408 chr19:36218396 nonsynonymous SNV 0.368 5 9 hm5C_associated_SNPs_37373 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr19:36218340-36218400
64251 chr17 29855737 29855737 1 + G A STAD 29855723 + 29855703 29855743 41 AGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCGAGTTCA AGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCAAGTTCA < 41bp 1 0.105862876084549 1 0.179492354393005 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB11FIP4 ENSG00000131242 CDS Human protein_coding chr17:29855723 chr17:29855737 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_37374 0 0 1 EIF3H POSTAR2 ENCODE chr17:29855637-29855789
64251 chr11 63719965 63719965 1 + A G STAD 63719969 + 63719949 63719989 41 TACCTCATCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT TACCTCATCGCGTGGGGAAACAGCTCCGTCCCTGTTGCCTT < 41bp 1 0.614360584619561 1 0.446462750434875 experiment 0.771278830760878 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719969 chr11:63719965 nonsynonymous SNV 0.988 1 17 hm5C_associated_SNPs_37375 0 0 3 GRWD1 POSTAR2 ENCODE chr11:63719953-63720040
64251 chr12 111884621 111884621 1 + T C STAD 111884617 + 111884597 111884637 41 AGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAAC AGGAGGTCCGGTGGTGCACACGGCCTGAGATGCCTGACAAC < 41bp 1 0.498670023887136 1 0.550092279911041 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884617 chr12:111884621 nonsynonymous SNV 0.937 4 25 hm5C_associated_SNPs_37376 0 0 1 DDX24 POSTAR2 ENCODE chr12:111884575-111884630
64251 chr17 43220904 43220904 1 + G A STAD 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCGTCCAGTAGCTCTTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.318591038215172 1 0.78833794593811 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220904 stopgain 1.000 3 13 hm5C_associated_SNPs_37378 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr6 33638163 33638163 1 + A C STAD 33638147 + 33638127 33638167 41 ATGTGCTTGGACCGCCAGTACTTGGCCATCGACGAGATCTC ATGTGCTTGGACCGCCAGTACTTGGCCATCGACGAGCTCTC < 41bp 1 0.345133202587872 1 0.299628853797913 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33638147 chr6:33638163 nonsynonymous SNV 0.993 2 37 hm5C_associated_SNPs_37379 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:33638160-33638200
64251 chr20 32665017 32665017 1 + A G STAD 32664999 + 32664979 32665019 41 GCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGG GCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGGGG < 41bp 1 0.79891031057624 1 0.504646182060242 experiment 0.40217937884752 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664999 chr20:32665017 nonsynonymous SNV 0.984 3 39 hm5C_associated_SNPs_37380 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665017 32665017 1 + A G STAD 32665000 + 32664980 32665020 41 CCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA CCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGGGGA < 41bp 1 0.353893884544535 1 0.598012983798981 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665000 chr20:32665017 nonsynonymous SNV 0.984 3 38 hm5C_associated_SNPs_37381 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665017 32665017 1 + A G STAD 32665025 + 32665005 32665045 41 ACGACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAA ACGACGGCGATGGGGAAGGGCTCCTGACACACAGCGAGGAA < 41bp 1 0.623330386815337 1 0.223606914281845 experiment 0.753339226369325 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665025 chr20:32665017 nonsynonymous SNV 0.984 3 13 hm5C_associated_SNPs_37382 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665017 32665017 1 + A G STAD 32665027 + 32665007 32665047 41 GACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAAGA GACGGCGATGGGGAAGGGCTCCTGACACACAGCGAGGAAGA < 41bp 1 0.556987401975307 1 0.139359831809998 experiment 0.886025196049387 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665027 chr20:32665017 nonsynonymous SNV 0.984 3 11 hm5C_associated_SNPs_37383 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665017 32665017 1 + A G STAD 32665034 + 32665014 32665054 41 ATGAGGAAGGGCTCCTGACACACAGCGAGGAAGAGCTGGTG ATGGGGAAGGGCTCCTGACACACAGCGAGGAAGAGCTGGTG < 41bp 1 0.753249507679099 1 0.168055891990662 experiment 0.493500984641803 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665034 chr20:32665017 nonsynonymous SNV 0.984 3 4 hm5C_associated_SNPs_37384 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 57484813 57484813 1 + C T STAD 57484828 + 57484808 57484848 41 CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC CCAACTGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC < 41bp 1 0.393208834448158 1 0.16646683216095 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GNAS ENSG00000087460 CDS Human protein_coding chr20:57484828 chr20:57484813 nonsynonymous SNV 1.000 5 6 hm5C_associated_SNPs_37385 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57484779-57484852
64251 chr5 71491945 71491945 1 + C T STAD 71491948 + 71491928 71491968 41 GAGAAGCAGGGAGTAGACGACATTGAAAAATTTGAAGATGA GAGAAGCAGGGAGTAGATGACATTGAAAAATTTGAAGATGA < 41bp 1 0.135192459169942 1 0.102862685918808 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491948 chr5:71491945 synonymous SNV . 0 18 hm5C_associated_SNPs_37386 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:71491940-71491964
64251 chr7 100484525 100484525 1 + A G STAD 100484519 + 100484499 100484539 41 GGGGAGCAGCGGGGGCGCTCCTCCTGAGGAGCCTCCTAAGG GGGGAGCAGCGGGGGCGCTCCTCCTGGGGAGCCTCCTAAGG < 41bp 1 0.689666542575244 1 0.842313766479492 experiment 0.620666914849511 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100484519 chr7:100484525 nonsynonymous SNV 0.938 2 27 hm5C_associated_SNPs_37388 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100484522-100484543
64251 chr8 28608180 28608180 1 + T G STAD 28608178 + 28608158 28608198 41 TCTCTCCCGTTTCCAGGTGACCTCACGGTGGACATTCCGAT TCTCTCCCGTTTCCAGGTGACCGCACGGTGGACATTCCGAT < 41bp 1 0.265040811767319 1 0.0761627852916718 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28608178 chr8:28608180 nonsynonymous SNV 0.349 4 23 hm5C_associated_SNPs_37395 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28608171-28608223
64251 chr8 21844781 21844781 1 + C A STAD 21844767 + 21844747 21844787 41 GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG GTAAGATCTACATTGGGGACCAAGTGCAGAAATCATCTAAG < 41bp 1 0.290542547068931 1 0.438777536153793 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844767 chr8:21844781 synonymous SNV . 0 35 hm5C_associated_SNPs_37396 0 0 1 DDX24 POSTAR2 ENCODE chr8:21844749-21844793
64251 chr10 7745425 7745425 1 + T A STAD 7745438 + 7745418 7745458 41 TTTCATCTGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA TTTCATCAGCTTCTTTCTTTCTGAAGTATCAGGCTTCGAAA < 41bp 1 0.778017886329846 1 0.805368065834045 experiment 0.443964227340309 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7745438 chr10:7745425 nonsynonymous SNV 0.096 0 8 hm5C_associated_SNPs_37397 0 0 1 DDX3X POSTAR2 ENCODE chr10:7745420-7745472
64251 chr7 2472441 2472441 1 + G T STAD 2472435 + 2472415 2472455 41 GCCGCTGCCCACGCCCGGGCCGGACAGGGACAGGGAGCTCA GCCGCTGCCCACGCCCGGGCCGGACATGGACAGGGAGCTCA < 41bp 1 0.465099710912816 1 0.140455812215805 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472435 chr7:2472441 nonsynonymous SNV 0.000 0 27 hm5C_associated_SNPs_37399 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr6 32945677 32945677 1 + T C STAD 32945671 + 32945651 32945691 41 GAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA GAGGAAAGTAGCAGTGAGAGCTCCTCCGAGGAAGAGGAGGA < 41bp 1 0.403169973618711 1 0.528647780418396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945671 chr6:32945677 synonymous SNV . 0 27 hm5C_associated_SNPs_37400 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:32945531-32945692
64251 chr20 39741495 39741495 1 + A G STAD 39741484 + 39741464 39741504 41 AAAAAATGTGTGGACAAGATCCGGAACCAGTATCGAGAAGA AAAAAATGTGTGGACAAGATCCGGAACCAGTGTCGAGAAGA < 41bp 1 0.777204482939176 1 0.162634670734406 experiment 0.445591034121648 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741484 chr20:39741495 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_37401 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:39741463-39741496
64251 chr20 57246312 57246312 1 + A G STAD 57246308 + 57246288 57246328 41 ATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA ATTGTACAGTCCATTTCTGACCTGGATGAAATATTCAGGGA < 41bp 1 0.324527725220981 1 0.28726065158844 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control STX16 ENSG00000124222;ENSG00000254995 CDS Human other chr20:57246308 chr20:57246312 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_37402 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57246266-57246353
64251 chr9 139887678 139887678 1 + T C STAD 139887676 + 139887656 139887696 41 CTGGCAAAACGCGTGTGGAGCCTGGAGCGGCGACTGGCAGG CTGGCAAAACGCGTGTGGAGCCCGGAGCGGCGACTGGCAGG < 41bp 1 0.604150093459396 1 0.147839337587357 experiment 0.791699813081209 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887676 chr9:139887678 nonsynonymous SNV 0.010 4 23 hm5C_associated_SNPs_37407 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:139887646-139887679
64251 chr9 139887678 139887678 1 + T C STAD 139887689 + 139887669 139887709 41 TGTGGAGCCTGGAGCGGCGACTGGCAGGTAGGATTGGGGGT TGTGGAGCCCGGAGCGGCGACTGGCAGGTAGGATTGGGGGT < 41bp 1 0.551348868069741 1 0.3314448595047 experiment 0.897302263860519 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887689 chr9:139887678 nonsynonymous SNV 0.010 4 10 hm5C_associated_SNPs_37408 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:139887646-139887679
64251 chrX 12837691 12837691 1 + C T STAD 12837674 + 12837654 12837694 41 GTGGAATTTGCTTTGATCCACAAAGAGAGGAAGAAGGCGAA GTGGAATTTGCTTTGATCCACAAAGAGAGGAAGAAGGTGAA < 41bp 1 0.437481502542959 1 0.513524115085602 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12837674 chrX:12837691 nonsynonymous SNV 0.998 5 38 hm5C_associated_SNPs_37409 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:12837678-12837707
64251 chr11 86947719 86947719 1 + T G STAD 86947706 + 86947686 86947726 41 TTGTTTTGCATCACAGCTGCCATGTACATGTTCTTTTTCAG TTGTTTTGCATCACAGCTGCCATGTACATGTTCGTTTTCAG < 41bp 1 0.0482409749267714 1 0.0361525118350983 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86947706 chr11:86947719 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_37410 0 0 4 PRPF8 POSTAR2 ENCODE chr11:86947688-86947765
64251 chr5 131953957 131953957 1 + T G STAD 131953938 + 131953918 131953958 41 GATGATTGTTATGAGGACAACAGAACTTGTGAACAAGGATC GATGATTGTTATGAGGACAACAGAACTTGTGAACAAGGAGC < 41bp 1 0.464402822607742 1 0.493989050388336 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131953938 chr5:131953957 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_37419 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131953904-131953977
64251 chr19 50333092 50333092 1 + G A STAD 50333110 + 50333090 50333130 41 TCGGCTTCTGTTTGAGAAGGCAGCCCCCCCGGCCTTGCTGG TCAGCTTCTGTTTGAGAAGGCAGCCCCCCCGGCCTTGCTGG < 41bp 1 0.198302282452898 1 0.317946553230286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50333110 chr19:50333092 nonsynonymous SNV 0.966 2 3 hm5C_associated_SNPs_37420 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:50333060-50333103
64251 chr11 73638354 73638354 1 + T C STAD 73638335 + 73638315 73638355 41 ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCTA ATTCTTGTGTTTTAGGTAGCCACATGGGAGAAGCAGATCCA < 41bp 1 0.598338519843431 1 0.856364548206329 experiment 0.803322960313137 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73638335 chr11:73638354 nonsynonymous SNV 0.972 4 40 hm5C_associated_SNPs_37422 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73638338-73638376
64251 chr16 3707235 3707235 1 + A G STAD 3707253 + 3707233 3707273 41 AGACCCTCCCAGTGGTCATCCATCCGCCTGTGGACAAGCCC AGGCCCTCCCAGTGGTCATCCATCCGCCTGTGGACAAGCCC < 41bp 1 0.150374189378848 1 0.070111095905304 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707253 chr16:3707235 synonymous SNV . 0 3 hm5C_associated_SNPs_37423 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3707200-3707238
64251 chr12 51034587 51034587 1 + T C STAD 51034590 + 51034570 51034610 41 CTTCTGCTCCCTCTAAGTACCACCGAACTCGATCTGGGGGA CTTCTGCTCCCTCTAAGCACCACCGAACTCGATCTGGGGGA < 41bp 1 0.547310720904926 1 0.609231293201447 experiment 0.905378558190149 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51034590 chr12:51034587 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_37427 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr12:51034563-51034594
64251 chr7 64531410 64531410 1 + T C STAD 64531408 + 64531388 64531428 41 GCATTTGCTGATGCGTTGCTCGTTATTCCCAAGGTGTGTAT GCATTTGCTGATGCGTTGCTCGCTATTCCCAAGGTGTGTAT < 41bp 1 0.702773217453853 1 0.212803870439529 experiment 0.594453565092294 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64531408 chr7:64531410 . . 0 23 hm5C_associated_SNPs_37428 0 0 1 PPIG POSTAR2 ENCODE chr7:64531372-64531419
64251 chr6 31594921 31594921 1 + A G STAD 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTGCCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.304513350024619 1 0.114459246397018 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594921 synonymous SNV . 0 3 hm5C_associated_SNPs_37429 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:31594899-31594922
64251 chr6 31594921 31594921 1 + A G STAD 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TGCCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.290950314155276 1 0.107025772333145 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594921 synonymous SNV . 0 2 hm5C_associated_SNPs_37430 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:31594899-31594922
64251 chr6 31594921 31594921 1 + A G STAD 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC GCCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.340082062171357 1 0.202972680330276 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594921 synonymous SNV . 0 1 hm5C_associated_SNPs_37431 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:31594899-31594922
64251 chr19 50921195 50921195 1 + G T STAD 50921206 + 50921186 50921226 41 TGGACCTGAGGCCTGGTGACCTTGCAAGCATCCCATGGGGC TGGACCTGATGCCTGGTGACCTTGCAAGCATCCCATGGGGC < 41bp 1 0.214420253412441 1 0.0842567384243011 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50921206 chr19:50921195 nonsynonymous SNV 0.942 0 10 hm5C_associated_SNPs_37432 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:50921160-50921200
64251 chr6 30887979 30887979 1 + G A STAD 30887972 + 30887952 30887992 41 GAGGATGGGACCATGACCTCCCTCTGCGGGGACTGGCTGCA GAGGATGGGACCATGACCTCCCTCTGCAGGGACTGGCTGCA < 41bp 1 0.111514821612648 1 0.172208249568939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30887972 chr6:30887979 nonsynonymous SNV 0.937 3 28 hm5C_associated_SNPs_37434 0 0 2 PPIG POSTAR2 ENCODE chr6:30887966-30887993
64251 chr16 67662300 67662300 1 + A G STAD 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CGCCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG < 41bp 1 0.288686984679792 1 0.119003444910049 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662300 nonsynonymous SNV 0.806 2 2 hm5C_associated_SNPs_37435 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:67662278-67662309
64251 chrX 73043716 73043716 1 - T A STAD 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGTTGTT < 41bp 1 0.329925641751773 1 0.309246361255646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043716 . . 0 37 hm5C_associated_SNPs_37437 0 0 48 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr3 9775910 9775910 1 + G A STAD 9775905 + 9775885 9775925 41 TACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAG TACGAGTGCCCGGTGGAGACCTGCCAAAAGGTCTACAAGAG < 41bp 1 0.331057860659206 1 0.365136384963989 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775905 chr3:9775910 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_37438 0 0 1 ZNF622 POSTAR2 ENCODE chr3:9775830-9775920
64251 chr15 40260054 40260054 1 + A G STAD 40260052 + 40260032 40260072 41 TGACCATCCCTAGTGACTTACCAGCTGACTTTCAAGATTTT TGACCATCCCTAGTGACTTACCGGCTGACTTTCAAGATTTT < 41bp 1 0.108780778525303 1 0.154015809297562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40260052 chr15:40260054 synonymous SNV . 0 23 hm5C_associated_SNPs_37440 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr15:40260033-40260055
64251 chr1 28862498 28862498 1 + C T STAD 28862499 + 28862479 28862519 41 TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTC TTGCCATCTCCCATGAGGGTCACGTGTACGGCTTCGGCCTC < 41bp 1 0.662397910471603 1 0.0948189496994019 experiment 0.675204179056793 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862499 chr1:28862498 synonymous SNV . 0 20 hm5C_associated_SNPs_37441 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28862448-28862506
64251 chr15 22955229 22955229 1 + C T STAD 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGAGTGGCTTCGACATAAAAGTACCACGCCG < 41bp 1 0.780266924020821 1 0.692640542984009 experiment 0.439466151958358 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955229 synonymous SNV . 0 15 hm5C_associated_SNPs_37442 0 0 7 GRWD1 POSTAR2 ENCODE chr15:22955131-22955243
64251 chr16 23700987 23700987 1 + A G STAD 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACCTCAGCAACGGCAGCGTGCAGATCAGCTTCTTCCA < 41bp 1 0.210788665885026 1 0.256470918655396 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700987 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_37447 0 0 4 GRWD1 POSTAR2 ENCODE chr16:23700956-23700994
64251 chr7 69064829 69064829 1 + T C STAD 69064849 + 69064829 69064869 41 TCCTCCGCCCCGTCCCGGCCCAGACCCCCGCGGAGGAAGCG CCCTCCGCCCCGTCCCGGCCCAGACCCCCGCGGAGGAAGCG < 41bp 1 0.159670527286903 1 0.0449912846088409 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:69064849 chr7:69064829 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_37448 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:69064828-69064829
64251 chr6 33411288 33411288 1 + G A STAD 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGAACCTCTCTTCCGGGGTCCCCAAGCCCC < 41bp 1 0.154753130030873 1 0.182938873767853 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411288 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_37449 0 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr1 1262961 1262961 1 + C T STAD 1262964 + 1262944 1262984 41 ACCACCCCTGGGTCGTGCGCCGCGCCGTCACCGTGGCCTTC ACCACCCCTGGGTCGTGTGCCGCGCCGTCACCGTGGCCTTC < 41bp 1 0.605434919012526 1 0.0724980235099792 experiment 0.789130161974947 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPTP ENSG00000224051 CDS Human protein_coding chr1:1262964 chr1:1262961 nonsynonymous SNV 0.043 3 18 hm5C_associated_SNPs_37450 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:1262919-1262962
64251 chr19 50031729 50031729 1 + G A STAD 50031728 + 50031708 50031748 41 CTTTGCCACTCCCCAGGGACCGATGATGTGGCGACCATCAG CTTTGCCACTCCCCAGGGACCAATGATGTGGCGACCATCAG < 41bp 1 0.525847348881599 1 0.240654081106186 experiment 0.948305302236802 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RCN3 ENSG00000142552 UTR5 Human protein_coding chr19:50031728 chr19:50031729 . . 0 22 hm5C_associated_SNPs_37451 0 0 3 SF3B4 POSTAR2 ENCODE chr19:50031676-50031733
64251 chr1 12065963 12065963 1 + G A STAD 12065958 + 12065938 12065978 41 TTCCTGGGCCCCAAGAACAGCCGTCGGGCCTTGATGGGCTA TTCCTGGGCCCCAAGAACAGCCGTCAGGCCTTGATGGGCTA < 41bp 1 0.0613592579805994 1 0.451068192720413 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12065958 chr1:12065963 nonsynonymous SNV 0.998 1 26 hm5C_associated_SNPs_37453 0 0 1 UCHL5 POSTAR2 ENCODE chr1:12065907-12065970
64251 chr12 57571256 57571256 1 + G A STAD 57571257 + 57571237 57571277 41 CAGCCTGCCCCGCATTGAGGCAGCCTCCATGAGTGGGGCTG CAGCCTGCCCCGCATTGAGACAGCCTCCATGAGTGGGGCTG < 41bp 1 0.134275028720724 1 0.243463426828384 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57571257 chr12:57571256 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_37455 0 0 5 NOL12 POSTAR2 ENCODE chr12:57571219-57571303
64251 chr6 26205129 26205129 1 + A G STAD 26205141 + 26205121 26205161 41 AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA AGCGATGGGTGTGGTCTACGCGCTGAAGAGACAGGGACGCA < 41bp 1 0.76523583627004 1 0.335579097270966 experiment 0.46952832745992 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4E ENSG00000198518 CDS Human other chr6:26205141 chr6:26205129 nonsynonymous SNV 0.390 0 9 hm5C_associated_SNPs_37456 0 0 54 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:26204840-26205140
64251 chrX 129185910 129185910 1 + T C STAD 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGACG < 41bp 1 0.700397809000182 1 0.920889258384705 experiment 0.599204381999635 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185910 nonsynonymous SNV 0.068 0 40 hm5C_associated_SNPs_37457 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:129185909-129185910
64251 chr7 101837135 101837135 1 + A G STAD 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCGTGGAGTTTGCACCGTCCGAGGGCGCTGGGACA < 41bp 1 0.025483728228426 1 0.333978861570358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837135 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_37461 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:101837117-101837138
64251 chr7 101837135 101837135 1 + A G STAD 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCGTGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC < 41bp 1 0.09379773346942 1 0.445286929607391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837135 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_37462 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:101837117-101837138
64251 chr11 14865502 14865502 1 + C T STAD 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TCCTGCATTAGAATTGATGGCTCTATACGTGGTAGCTGCCA < 41bp 1 0.440788151253017 1 0.875625967979431 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865502 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_37463 0 0 2 GRWD1 POSTAR2 ENCODE chr11:14865417-14865522
64251 chr1 117618443 117618443 1 + C T STAD 117618425 + 117618405 117618445 41 GTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCCGG GTGTTTCCAAGAAGGTAGAACCCTCAGACCCAGTAGCCTGG < 41bp 1 0.0793304050482115 1 0.0400985777378082 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618425 chr1:117618443 nonsynonymous SNV 0.314 1 39 hm5C_associated_SNPs_37466 0 0 6 BUD13 POSTAR2 ENCODE chr1:117618414-117618475
64251 chr12 132400493 132400493 1 + G T STAD 132400500 + 132400480 132400520 41 TGCCGCCTGCACAGCGCCCCCAACCTGTCTGACTTGCACGT TGCCGCCTGCACATCGCCCCCAACCTGTCTGACTTGCACGT < 41bp 1 0.182282523969113 1 0.0981128215789795 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400500 chr12:132400493 nonsynonymous SNV 0.987 2 14 hm5C_associated_SNPs_37467 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr12:132400463-132400493
64251 chr8 21859729 21859729 1 + G T STAD 21859721 + 21859701 21859741 41 CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGC CCAAGAAGAGGACCACACCCCTGAACCATGAGAGCGACCGC < 41bp 1 0.701607910337119 1 0.786028265953064 experiment 0.596784179325762 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859721 chr8:21859729 nonsynonymous SNV 0.995 1 29 hm5C_associated_SNPs_37468 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:21859705-21859730
64251 chr8 21859729 21859729 1 + G T STAD 21859735 + 21859715 21859755 41 ACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCAT ACACCCCTGAACCATGAGAGCGACCGCTTTCTGCACATCAT < 41bp 1 0.317826814556017 1 0.0937542915344238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859735 chr8:21859729 nonsynonymous SNV 0.995 1 15 hm5C_associated_SNPs_37469 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:21859705-21859730
64251 chr6 26156700 26156700 1 + G T STAD 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGTCTTCAGGTGCGGCCAAGCGCAAAGCGTCTG < 41bp 1 0.499967315127047 1 0.378855317831039 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156700 nonsynonymous SNV 0.668 0 14 hm5C_associated_SNPs_37470 0 0 49 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr19 1254309 1254309 1 + T C STAD 1254325 + 1254305 1254345 41 CCGCTGCTGCGCGGGGGGACCCCAGCATAGCCTCCCCCGTG CCGCCGCTGCGCGGGGGGACCCCAGCATAGCCTCCCCCGTG < 41bp 1 0.609961783417562 1 0.411217898130417 experiment 0.780076433164877 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIDN ENSG00000167470 CDS Human protein_coding chr19:1254325 chr19:1254309 synonymous SNV . 0 5 hm5C_associated_SNPs_37471 0 0 2 FXR2 POSTAR2 ENCODE chr19:1254290-1254316
64251 chr10 17277877 17277877 1 + T C STAD 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCCG < 41bp 1 0.0626253181497983 1 0.484212040901184 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277877 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_37472 0 0 23 PTBP1 POSTAR2 GSE57278,GSM1378377 chr10:17277840-17277880
64251 chr20 5932800 5932800 1 + C A STAD 5932807 + 5932787 5932827 41 AACCACAGGAAAACGTACTTCTGGTAGGTGAGGTCAATGAT AACCACAGGAAAAAGTACTTCTGGTAGGTGAGGTCAATGAT < 41bp 1 0.420200636680352 1 0.308088779449463 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM8 ENSG00000125885 CDS Human protein_coding chr20:5932807 chr20:5932800 nonsynonymous SNV 0.774 0 14 hm5C_associated_SNPs_37474 0 0 6 BUD13 POSTAR2 ENCODE chr20:5932698-5932810
64251 chr2 192141703 192141703 1 + G A STAD 192141711 + 192141691 192141731 41 GAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAA GAACCTCTCAATAAGGAGACCTTCATCAACAACCTCAAGAA < 41bp 1 0.32015539375133 1 0.0656527876853943 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141711 chr2:192141703 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_37475 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378375 chr2:192141700-192141720
64251 chr10 17277193 17277193 1 + G A STAD 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCATGA < 41bp 1 0.132458440697188 1 0.0817661881446838 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277193 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_37476 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277193 17277193 1 + G A STAD 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCCCTGGAACGCCAGATGCATGAAATGGAAGA < 41bp 1 0.405657723623962 1 0.468558132648468 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277193 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_37477 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277193 17277193 1 + G A STAD 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCCCTGGAACGCCAGATGCATGAAATGGAAGAGAACTTT < 41bp 1 0.566250809601883 1 0.192253440618515 experiment 0.867498380796233 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277193 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_37478 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr1 214795534 214795534 1 + A T STAD 214795516 + 214795496 214795536 41 AAGTTTCAAGAACTCCAACTCCAACTGGAGAAAGCAAAAGT AAGTTTCAAGAACTCCAACTCCAACTGGAGAAAGCAAATGT < 41bp 1 0.0327326273805474 1 0.166097223758698 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214795516 chr1:214795534 nonsynonymous SNV 0.991 2 39 hm5C_associated_SNPs_37479 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:214795516-214795539
64251 chr1 214795534 214795534 1 + A T STAD 214795520 + 214795500 214795540 41 TTCAAGAACTCCAACTCCAACTGGAGAAAGCAAAAGTGGAA TTCAAGAACTCCAACTCCAACTGGAGAAAGCAAATGTGGAA < 41bp 1 0.670621869227452 1 0.724382281303406 experiment 0.658756261545097 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214795520 chr1:214795534 nonsynonymous SNV 0.991 2 35 hm5C_associated_SNPs_37480 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:214795516-214795539
64251 chr17 46136555 46136555 1 + C G STAD 46136553 + 46136533 46136573 41 CGAGCCCGAGCCATGAAGATCCCTTTCACCAATGACAAAAT CGAGCCCGAGCCATGAAGATCCGTTTCACCAATGACAAAAT < 41bp 1 0.0502997928538764 1 0.0712607502937317 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46136553 chr17:46136555 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_37481 0 0 14 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:46136534-46136566
64251 chr1 151020376 151020376 1 + C T STAD 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCTCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC < 41bp 1 0.671973875576108 1 0.582908153533936 experiment 0.656052248847783 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020376 nonsynonymous SNV 0.667 1 6 hm5C_associated_SNPs_37482 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020376 151020376 1 + C T STAD 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCTCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC < 41bp 1 0.498655537555108 1 0.773437738418579 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020376 nonsynonymous SNV 0.667 1 5 hm5C_associated_SNPs_37483 0 0 2 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr2 217012887 217012887 1 + G A STAD 217012900 + 217012880 217012920 41 TCCTCCCGCTGAGGTGACAACAAAAAGTCAGATTCCTCTCT TCCTCCCACTGAGGTGACAACAAAAAGTCAGATTCCTCTCT < 41bp 1 0.595626657763052 1 0.302519679069519 experiment 0.808746684473895 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:217012900 chr2:217012887 nonsynonymous SNV 0.870 0 8 hm5C_associated_SNPs_37485 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:217012820-217012900
64251 chr14 61346450 61346450 1 + G C STAD 61346465 + 61346445 61346485 41 CACTGGCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA CACTGCCACCTATTCACAAGCTTGAAGAAGCTCTGTATGAA < 41bp 1 0.576451549121912 1 0.718778073787689 experiment 0.847096901756176 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346465 chr14:61346450 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_37486 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:61346433-61346464
64251 chr13 103286381 103286381 1 + G A STAD 103286380 + 103286360 103286400 41 TAACTGGACACTGAGAGGGACGCAGCTGATGAATGGAACAT TAACTGGACACTGAGAGGGACACAGCTGATGAATGGAACAT < 41bp 1 0.414570903364182 1 0.107736349105835 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103286380 chr13:103286381 synonymous SNV . 0 22 hm5C_associated_SNPs_37493 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:103286368-103286390
64251 chr17 41143116 41143116 1 + G A STAD 41143135 + 41143115 41143155 41 TGCCAACCTCCAGGACCTCTCTCTGGGAGGCAAGGATGAGC TACCAACCTCCAGGACCTCTCTCTGGGAGGCAAGGATGAGC < 41bp 1 0.431160263669318 1 0.489218592643738 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41143135 chr17:41143116 nonsynonymous SNV 0.999 1 2 hm5C_associated_SNPs_37494 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:41143091-41143138
64251 chr1 29651765 29651765 1 + G A STAD 29651781 + 29651761 29651801 41 CGCTGCCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAAC CGCTACCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAAC < 41bp 1 0.040232372690272 1 0.0484530627727509 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPRU ENSG00000060656 CDS Human protein_coding chr1:29651781 chr1:29651765 nonsynonymous SNV 0.999 1 5 hm5C_associated_SNPs_37496 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29651706-29651767
64251 chr19 1913067 1913067 1 + G A STAD 1913048 + 1913028 1913068 41 TCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACGC TCGCCCGACGGCGCCCTGGGCACCCGCTTCCGCATCCACAC < 41bp 1 0.248707680510413 1 0.0779781341552734 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913048 chr19:1913067 nonsynonymous SNV 0.003 0 40 hm5C_associated_SNPs_37497 0 0 1 TIA1 POSTAR2 ENCODE chr19:1913011-1913087
64251 chr12 109629520 109629520 1 + C T STAD 109629531 + 109629511 109629551 41 CCAGAACAACGACATCGACACCGGGTGGTTGGACTACCTCA CCAGAACAATGACATCGACACCGGGTGGTTGGACTACCTCA < 41bp 1 0.305366494709967 1 0.471925258636475 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109629531 chr12:109629520 synonymous SNV . 0 10 hm5C_associated_SNPs_37499 0 0 3 GRWD1 POSTAR2 ENCODE chr12:109629469-109629568
64251 chr20 43243321 43243321 1 + A C STAD 43243326 + 43243306 43243346 41 AAGCTGGCTGGAGACATGGGCGAGCTGGCACTCGAGGGGGC AAGCTGGCTGGAGACCTGGGCGAGCTGGCACTCGAGGGGGC < 41bp 1 0.664054626265393 1 0.332049250602722 experiment 0.671890747469214 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKIG ENSG00000168734 CDS Human protein_coding chr20:43243326 chr20:43243321 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_37500 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:43243304-43243327
64251 chr15 91432748 91432748 1 + T C STAD 91432750 + 91432730 91432770 41 GGCGCTGTCCCCCACAGGTCCGCACCTGACGTCCCACCCTG GGCGCTGTCCCCCACAGGCCCGCACCTGACGTCCCACCCTG < 41bp 1 0.39037768968293 1 0.113013714551926 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FES ENSG00000182511 CDS Human protein_coding chr15:91432750 chr15:91432748 nonsynonymous SNV 0.220 4 19 hm5C_associated_SNPs_37502 0 0 1 PRPF8 POSTAR2 ENCODE chr15:91432651-91432760
64251 chr3 184042682 184042682 1 + G A STAD 184042675 + 184042655 184042695 41 GTGAATGGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAG GTGAATGGCAGGCAGAGGAACGAGGACACCTGAAGGAAGAG < 41bp 1 0.570547115118129 1 0.598645091056824 experiment 0.858905769763743 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042675 chr3:184042682 nonsynonymous SNV 0.973 3 28 hm5C_associated_SNPs_37503 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr3 184042682 184042682 1 + G A STAD 184042681 + 184042661 184042701 41 GGCAGGCAGAGGAACGAGGACGCCTGAAGGAAGAGCTGGAA GGCAGGCAGAGGAACGAGGACACCTGAAGGAAGAGCTGGAA < 41bp 1 0.43885692561355 1 0.403298795223236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042681 chr3:184042682 nonsynonymous SNV 0.973 3 22 hm5C_associated_SNPs_37504 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:184042669-184042737
64251 chr6 57012312 57012312 1 + A C STAD 57012315 + 57012295 57012335 41 CCTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGAT CCTGGTTCTGTGAATGCCATCAGCGATTCCCAAGTGAAGAT < 41bp 1 0.408900374267449 1 0.519609868526459 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012315 chr6:57012312 nonsynonymous SNV 0.952 0 18 hm5C_associated_SNPs_37516 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr6:57012259-57012317
64251 chr19 41077980 41077980 1 + G T STAD 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GTACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG < 41bp 1 0.401147826421513 1 0.896226286888123 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41077980 nonsynonymous SNV 0.990 3 2 hm5C_associated_SNPs_37517 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr20 18142527 18142527 1 + G A STAD 18142508 + 18142488 18142528 41 CCATCATTACTGTTGAGGGACTTAGAAAACGAGCAAGTCGG CCATCATTACTGTTGAGGGACTTAGAAAACGAGCAAGTCAG < 41bp 1 0.11151116490325 1 0.0425105690956116 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KAT14 ENSG00000149474 CDS Human protein_coding chr20:18142508 chr20:18142527 nonsynonymous SNV 0.996 3 40 hm5C_associated_SNPs_37518 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:18142497-18142547
64251 chr19 49652922 49652922 1 + C T STAD 49652931 + 49652911 49652951 41 TCGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCTCC TCGTTCGGCTGTAGCGGGAGCCCTGGGCTCTCCGGGGCTCC < 41bp 1 0.117766277324477 1 0.0886055827140808 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652931 chr19:49652922 nonsynonymous SNV 0.987 0 12 hm5C_associated_SNPs_37519 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr19 49652922 49652922 1 + C T STAD 49652932 + 49652912 49652952 41 CGTTCGGCTGCAGCGGGAGCCCTGGGCTCTCCGGGGCTCCC CGTTCGGCTGTAGCGGGAGCCCTGGGCTCTCCGGGGCTCCC < 41bp 1 0.217112767019216 1 0.39899343252182 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49652932 chr19:49652922 nonsynonymous SNV 0.987 0 11 hm5C_associated_SNPs_37520 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:49652913-49652936
64251 chr19 3525967 3525967 1 + G C STAD 3525949 + 3525929 3525969 41 GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAG GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGCAG < 41bp 1 0.447094462270034 1 0.749253749847412 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3525949 chr19:3525967 nonsynonymous SNV 0.997 4 39 hm5C_associated_SNPs_37521 0 0 2 GRWD1 POSTAR2 ENCODE chr19:3525913-3525999
64251 chr16 70575719 70575719 1 + T C STAD 70575721 + 70575701 70575741 41 TGAGTTGGACAGCCTCTCTCCCATTCTGTTTTGCCAGGTTG TGAGTTGGACAGCCTCTCCCCCATTCTGTTTTGCCAGGTTG < 41bp 1 0.0355885813633419 1 0.0568810999393463 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70575721 chr16:70575719 synonymous SNV . 0 19 hm5C_associated_SNPs_37523 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70575678-70575729
64251 chr1 230379172 230379172 1 + A C STAD 230379152 + 230379132 230379172 41 AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGC < 41bp 1 0.0845525379309019 1 0.115952759981155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230379152 chr1:230379172 nonsynonymous SNV 0.853 4 41 hm5C_associated_SNPs_37524 0 0 2 RPS3 POSTAR2 ENCODE chr1:230379127-230379174
64251 chr20 5958554 5958554 1 + T A STAD 5958574 + 5958554 5958594 41 TGTTTGTGGTAACACCACGACCACCTCTGGTCTGACGGTAA AGTTTGTGGTAACACCACGACCACCTCTGGTCTGACGGTAA < 41bp 1 0.0978552596466617 1 0.190364748239517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCM8 ENSG00000125885 CDS Human protein_coding chr20:5958574 chr20:5958554 stopgain 1.000 1 1 hm5C_associated_SNPs_37525 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr20:5958541-5958563
64251 chr19 46195970 46195970 1 + C G STAD 46195957 + 46195937 46195977 41 GTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCCGGGGGCC GTACAGGTTTCAGGGCAAAGCGGCCATGCGTTCGGGGGGCC < 41bp 1 0.706847767604315 1 0.729673981666565 experiment 0.58630446479137 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46195957 chr19:46195970 synonymous SNV . 0 34 hm5C_associated_SNPs_37526 0 0 4 DDX3X POSTAR2 ENCODE chr19:46195960-46196024
64251 chr11 108205742 108205742 1 + T G STAD 108205739 + 108205719 108205759 41 AAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTCGCT AAATCTGGTGACTATACAGTCATGTAAAGCAGAATTTCGCT < 41bp 1 0.0817669279944827 1 0.0784746408462524 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108205739 chr11:108205742 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_37527 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:108205733-108205754
64251 chr1 206858688 206858688 1 + G C STAD 206858686 + 206858666 206858706 41 CCCCGGCGCAGCCGCCGCCGCCGCCCCCGCAGCAGTTCCCG CCCCGGCGCAGCCGCCGCCGCCCCCCCCGCAGCAGTTCCCG < 41bp 1 0.221879435921644 1 0.0656852126121521 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206858686 chr1:206858688 synonymous SNV . 0 23 hm5C_associated_SNPs_37534 0 0 2 GEMIN5 POSTAR2 ENCODE chr1:206858659-206858720
64251 chr21 30714967 30714967 1 + G A STAD 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CTGACCAGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA < 41bp 1 0.310161451727672 1 0.0805723667144775 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714967 nonsynonymous SNV 0.012 0 7 hm5C_associated_SNPs_37536 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30714940-30714980
64251 chr17 74078041 74078041 1 - G A STAD 74078053 - 74078033 74078073 41 GGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCAGC GGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCTGGGCCAGC < 41bp 1 0.461508972316328 1 0.189685851335526 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078053 chr17:74078041 nonsynonymous SNV 0.003 1 33 hm5C_associated_SNPs_37537 0 0 1 XRN2 POSTAR2 ENCODE chr17:74078019-74078051
64251 chr17 74078041 74078041 1 - G A STAD 74078054 - 74078034 74078074 41 GGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCAG GGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCTGGGCCAG < 41bp 1 0.637789464033845 1 0.3298499584198 experiment 0.72442107193231 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078054 chr17:74078041 nonsynonymous SNV 0.003 1 34 hm5C_associated_SNPs_37538 0 0 1 XRN2 POSTAR2 ENCODE chr17:74078019-74078051
64251 chr17 74078041 74078041 1 - G A STAD 74078055 - 74078035 74078075 41 TGGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCCA TGGGCTGGGGCCGCTCTTGGCCCCAAGGTTGCCCTGGGCCA < 41bp 1 0.725355078032562 1 0.205851435661316 experiment 0.549289843934876 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZACN ENSG00000186919 CDS Human protein_coding chr17:74078055 chr17:74078041 nonsynonymous SNV 0.003 1 35 hm5C_associated_SNPs_37539 0 0 1 XRN2 POSTAR2 ENCODE chr17:74078019-74078051
64251 chr11 12281433 12281433 1 + G A STAD 12281442 + 12281422 12281462 41 CACCCTGGAAGGCAGCCCCCCAGGTATCTCCACCTCCTTCT CACCCTGGAAGACAGCCCCCCAGGTATCTCCACCTCCTTCT < 41bp 1 0.564615743546974 1 0.134138166904449 experiment 0.870768512906052 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12281442 chr11:12281433 nonsynonymous SNV 0.973 0 12 hm5C_associated_SNPs_37541 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:12281414-12281444
64251 chr5 33459936 33459936 1 + C T STAD 33459929 + 33459909 33459949 41 CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACCCATG CCTTTGAGGTGGAGAAGGAGCTGTTTGTCCTGAAACCCATG < 41bp 1 0.472487495206803 1 0.0691403448581696 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33459929 chr5:33459936 nonsynonymous SNV 0.972 4 28 hm5C_associated_SNPs_37542 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:33459846-33459962
64251 chr18 8635547 8635547 1 + C T STAD 8635557 + 8635537 8635577 41 TCAGAAGATGCAGAGCTTCTCTTAGTTGGAAATAAGTTGGA TCAGAAGATGTAGAGCTTCTCTTAGTTGGAAATAAGTTGGA < 41bp 1 0.504031114754782 1 0.472482770681381 experiment 0.991937770490436 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB12 ENSG00000206418 CDS Human protein_coding chr18:8635557 chr18:8635547 nonsynonymous SNV 0.993 0 11 hm5C_associated_SNPs_37543 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:8635530-8635564
64251 chr19 19638863 19638863 1 + C T STAD 19638852 + 19638832 19638872 41 TCCACACAACCCGCTGGGTGCCCCCCTTGATCGGGGAGCTG TCCACACAACCCGCTGGGTGCCCCCCTTGATTGGGGAGCTG < 41bp 1 0.154271000625435 1 0.0422485172748566 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638852 chr19:19638863 synonymous SNV . 0 32 hm5C_associated_SNPs_37545 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr1 183086469 183086469 1 + C T STAD 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGGATGGGTGGTGTGCGGAACAGAGAGATGGCTCTG < 41bp 1 0.794048501363788 1 0.685839116573334 experiment 0.411902997272424 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086469 nonsynonymous SNV 0.987 1 17 hm5C_associated_SNPs_37546 0 0 2 SND1 POSTAR2 ENCODE chr1:183086460-183086481
64251 chr19 52819102 52819102 1 + A G STAD 52819117 + 52819097 52819137 41 TCCTGACCTGAATATTAACTCCATGTTGGAGCAAAGGAGGG TCCTGGCCTGAATATTAACTCCATGTTGGAGCAAAGGAGGG < 41bp 1 0.187173973921798 1 0.329226970672607 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52819117 chr19:52819102 nonsynonymous SNV 0.099 0 6 hm5C_associated_SNPs_37548 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:52819080-52819105
64251 chr1 16261125 16261125 1 + C T STAD 16261121 + 16261101 16261141 41 CCATGCCTGTGATCGACGATCGTCCGGCAGACGCGGGCTCA CCATGCCTGTGATCGACGATCGTCTGGCAGACGCGGGCTCA < 41bp 1 0.218172222182095 1 0.0936138927936554 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261121 chr1:16261125 nonsynonymous SNV 0.070 1 25 hm5C_associated_SNPs_37549 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:16261060-16261160
64251 chrX 70517705 70517705 1 + C T STAD 70517707 + 70517687 70517727 41 CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG CAGGAGGAAGAGCGCAGGTGCCGTGAAGAAGAGATGCGGCG < 41bp 1 0.21523530044196 1 0.251962333917618 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517707 chrX:70517705 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_37550 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70517674-70517712
64251 chr11 2424091 2424091 1 + G A STAD 2424079 + 2424059 2424099 41 CCCTCACCCCCGTCAGGCCTCCTCCCAGCCACGGTGCAGCC CCCTCACCCCCGTCAGGCCTCCTCCCAGCCACAGTGCAGCC < 41bp 1 0.0476719495994179 1 0.03143510222435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424079 chr11:2424091 synonymous SNV . 0 33 hm5C_associated_SNPs_37551 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:2424086-2424118
64251 chr19 49685882 49685882 1 + G T STAD 49685868 + 49685848 49685888 41 AAGCTTCCCTCATGGACGCCCTGCTGAATGACCGGCCTGAG AAGCTTCCCTCATGGACGCCCTGCTGAATGACCGTCCTGAG < 41bp 1 0.393019565921284 1 0.0922068357467651 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49685868 chr19:49685882 synonymous SNV . 0 35 hm5C_associated_SNPs_37562 0 0 1 YBX3 POSTAR2 ENCODE chr19:49685699-49685907
64251 chr1 114483597 114483597 1 + C T STAD 114483612 + 114483592 114483632 41 TAGGCCGGGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG TAGGCTGGGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG < 41bp 1 0.671503875408556 1 0.712021470069885 experiment 0.656992249182888 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483612 chr1:114483597 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_37563 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483580-114483600
64251 chr3 47456465 47456465 1 - C A STAD 47456479 - 47456459 47456499 41 GGCCTTTTGTCCTCAGGGACCCCAGGGCGGGGCAGTTCCCC GGCCTTTTGTCCTCAGGGACCCCAGGGCGGGGCATTTCCCC < 41bp 1 0.179628388555803 1 0.252357542514801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAP ENSG00000114650 CDS Human protein_coding chr3:47456479 chr3:47456465 nonsynonymous SNV 0.963 3 35 hm5C_associated_SNPs_37565 0 0 6 EFTUD2 POSTAR2 ENCODE chr3:47456451-47456528
64251 chr17 7476162 7476162 1 + G A STAD 7476180 + 7476160 7476200 41 ATGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA ATATCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCA < 41bp 1 0.348131850167645 1 0.151061087846756 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476180 chr17:7476162 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_37567 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chr17 7476162 7476162 1 + G A STAD 7476181 + 7476161 7476201 41 TGTCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA TATCTGCGAGCCAGGATTCCCGGTAAGAAAGGCATTTGCAA < 41bp 1 0.675393906285368 1 0.492664247751236 experiment 0.649212187429263 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476181 chr17:7476162 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_37568 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7476146-7476187
64251 chrX 41027344 41027344 1 + A G STAD 41027349 + 41027329 41027369 41 GTTTTGGATGGTGACAAAGACAGTGTTAATTGTGCAAGACA GTTTTGGATGGTGACGAAGACAGTGTTAATTGTGCAAGACA < 41bp 1 0.322410504809931 1 0.351355195045471 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41027349 chrX:41027344 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_37569 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41027266-41027379
64251 chr19 42397364 42397364 1 + G A STAD 42397351 + 42397331 42397371 41 TCTTCCTCCTACAGACATACCATCTCTACCGACGAAGAAAA TCTTCCTCCTACAGACATACCATCTCTACCGACAAAGAAAA < 41bp 1 0.0602606018685697 1 0.0283128321170807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42397351 chr19:42397364 nonsynonymous SNV 0.994 5 34 hm5C_associated_SNPs_37571 0 0 8 BUD13 POSTAR2 ENCODE chr19:42397350-42397370
64251 chr19 4323385 4323385 1 + G A STAD 4323383 + 4323363 4323403 41 ATGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG ATGCCCGCACCAAACAAGTGCTACACACTTTCAAGACCAGG < 41bp 1 0.231214203366065 1 0.203032821416855 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323383 chr19:4323385 nonsynonymous SNV 0.765 0 23 hm5C_associated_SNPs_37573 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4323342-4323387
64251 chr2 47233862 47233862 1 + A G STAD 47233842 + 47233822 47233862 41 CTTTGGTACCAGGTGGCCCTCTCCATGGTGGCTTGTGGGAA CTTTGGTACCAGGTGGCCCTCTCCATGGTGGCTTGTGGGAG < 41bp 1 0.770044940213138 1 0.97633570432663 experiment 0.459910119573725 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47233842 chr2:47233862 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_37574 0 0 2 PPIG POSTAR2 ENCODE chr2:47233818-47233864
64251 chr19 35504571 35504571 1 + A C STAD 35504562 + 35504542 35504582 41 CGTGGCCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGA CGTGGCCATGTCACGCCCAACCTTTCCCGCGCCAGCAGCGA < 41bp 1 0.0210899222925039 1 0.0497511625289917 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504562 chr19:35504571 synonymous SNV . 0 30 hm5C_associated_SNPs_37575 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr19 35504571 35504571 1 + A C STAD 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGCGCCAGCAGCGACGCAG < 41bp 1 0.372333785180075 1 0.0645481050014496 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504571 synonymous SNV . 0 25 hm5C_associated_SNPs_37576 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr14 64990077 64990077 1 + C T STAD 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGAGTGTCAGTTGCGACTGCACAATGATATGCACAAAGGC < 41bp 1 0.650276879289669 1 0.635713934898376 experiment 0.699446241420662 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990077 nonsynonymous SNV 0.998 3 6 hm5C_associated_SNPs_37577 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64990042-64990078
64251 chr17 77077146 77077146 1 + A T STAD 77077130 + 77077110 77077150 41 AAAGTGGGCAGCTCAAATGGCAAGACGAACTCAACCAGCAC AAAGTGGGCAGCTCAAATGGCAAGACGAACTCAACCTGCAC < 41bp 1 0.655068926122156 1 0.605586230754852 experiment 0.689862147755687 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ENGASE ENSG00000167280 CDS Human protein_coding chr17:77077130 chr17:77077146 nonsynonymous SNV 0.036 0 37 hm5C_associated_SNPs_37579 0 0 1 DDX24 POSTAR2 ENCODE chr17:77077143-77077157
64251 chr14 37754628 37754628 1 + A G STAD 37754619 + 37754599 37754639 41 GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGGAAA GGAGAGAGATGAAGCAATTGCACGAGCCAGGCATATGGAAA < 41bp 1 0.539182430888435 1 0.629390954971313 experiment 0.921635138223131 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37754619 chr14:37754628 nonsynonymous SNV 0.930 0 30 hm5C_associated_SNPs_37580 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:37754573-37754632
64251 chr2 102486168 102486168 1 + G A STAD 102486184 + 102486164 102486204 41 CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG CAGTAAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG < 41bp 1 0.717617517122404 1 0.638346433639526 experiment 0.564764965755192 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486184 chr2:102486168 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_37581 0 0 6 FMR1 POSTAR2 ENCODE chr2:102486153-102486258
64251 chr14 62204985 62204985 1 + A C STAD 62204993 + 62204973 62205013 41 AAGTTGCATTAAAATTAGAACCAAATCCAGAGTCACTGGAA AAGTTGCATTAACATTAGAACCAAATCCAGAGTCACTGGAA < 41bp 1 0.271210232550742 1 0.1056809425354 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIF1A ENSG00000100644 CDS Human protein_coding chr14:62204993 chr14:62204985 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_37582 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:62204969-62204994
64251 chr13 28752031 28752031 1 + T G STAD 28752016 + 28751996 28752036 41 TTTCAGATCCTCTAACATCACCTGCTTCATCCTTGTTTAAT TTTCAGATCCTCTAACATCACCTGCTTCATCCTTGGTTAAT < 41bp 1 0.105954715027167 1 0.0452249348163605 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752016 chr13:28752031 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_37583 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752017 + 28751997 28752037 41 TTCAGATCCTCTAACATCACCTGCTTCATCCTTGTTTAATG TTCAGATCCTCTAACATCACCTGCTTCATCCTTGGTTAATG < 41bp 1 0.250948648923868 1 0.0403040647506714 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752017 chr13:28752031 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_37584 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752020 + 28752000 28752040 41 AGATCCTCTAACATCACCTGCTTCATCCTTGTTTAATGACT AGATCCTCTAACATCACCTGCTTCATCCTTGGTTAATGACT < 41bp 1 0.107867828979762 1 0.153765916824341 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752020 chr13:28752031 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_37585 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752023 + 28752003 28752043 41 TCCTCTAACATCACCTGCTTCATCCTTGTTTAATGACTTTG TCCTCTAACATCACCTGCTTCATCCTTGGTTAATGACTTTG < 41bp 1 0.101570584378885 1 0.0782935321331024 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752023 chr13:28752031 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_37586 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752026 + 28752006 28752046 41 TCTAACATCACCTGCTTCATCCTTGTTTAATGACTTTGGTG TCTAACATCACCTGCTTCATCCTTGGTTAATGACTTTGGTG < 41bp 1 0.115542597231094 1 0.397342473268509 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752026 chr13:28752031 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_37587 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752027 + 28752007 28752047 41 CTAACATCACCTGCTTCATCCTTGTTTAATGACTTTGGTGC CTAACATCACCTGCTTCATCCTTGGTTAATGACTTTGGTGC < 41bp 1 0.336384241709385 1 0.230702131986618 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752027 chr13:28752031 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_37588 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr13 28752031 28752031 1 + T G STAD 28752051 + 28752031 28752071 41 TTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAA GTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAA < 41bp 1 0.596721199428219 1 0.316341042518616 experiment 0.806557601143562 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752051 chr13:28752031 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_37589 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28752020-28752040
64251 chr17 4799503 4799503 1 + C T STAD 4799505 + 4799485 4799525 41 CAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGA CAGTCCTTTGCCGACCTCTCCCACCGCCCTCTGCTGGTCGA < 41bp 1 0.0953752962531251 1 0.038821667432785 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799505 chr17:4799503 nonsynonymous SNV 0.992 3 19 hm5C_associated_SNPs_37590 0 0 1 GRWD1 POSTAR2 ENCODE chr17:4799493-4799518
64251 chr17 4799503 4799503 1 + C T STAD 4799508 + 4799488 4799528 41 TCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGACCT TCCTTTGCCGACCTCTCCCACCGCCCTCTGCTGGTCGACCT < 41bp 1 0.167390112976126 1 0.431831687688828 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799508 chr17:4799503 nonsynonymous SNV 0.992 3 16 hm5C_associated_SNPs_37591 0 0 1 GRWD1 POSTAR2 ENCODE chr17:4799493-4799518
64251 chr3 99897207 99897207 1 + A G STAD 99897188 + 99897168 99897208 41 AACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAA AACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGGA < 41bp 1 0.204633838123062 1 0.200417578220367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897188 chr3:99897207 nonsynonymous SNV 0.999 0 40 hm5C_associated_SNPs_37592 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:99897167-99897208
64251 chr3 99897207 99897207 1 + A G STAD 99897190 + 99897170 99897210 41 CTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATC CTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGGATC < 41bp 1 0.287026897417794 1 0.194734871387482 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99897190 chr3:99897207 nonsynonymous SNV 0.999 0 38 hm5C_associated_SNPs_37593 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:99897167-99897208
64251 chr5 17275371 17275371 1 + G A STAD 17275370 + 17275350 17275390 41 AAGAAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAA AAGAAGGGCTACAATGTGAACAACGAGAAAGCCAAGGAGAA < 41bp 1 0.497996304880379 1 0.314949661493301 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275370 chr5:17275371 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_37595 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275371 17275371 1 + G A STAD 17275373 + 17275353 17275393 41 AAGGGCTACAATGTGAACGACGAGAAAGCCAAGGAGAAAGA AAGGGCTACAATGTGAACAACGAGAAAGCCAAGGAGAAAGA < 41bp 1 0.77827647586754 1 0.632195651531219 experiment 0.44344704826492 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275373 chr5:17275371 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_37596 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr5 17275371 17275371 1 + G A STAD 17275381 + 17275361 17275401 41 CAATGTGAACGACGAGAAAGCCAAGGAGAAAGACAAGAAGG CAATGTGAACAACGAGAAAGCCAAGGAGAAAGACAAGAAGG < 41bp 1 0.374111086805224 1 0.465021044015884 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275381 chr5:17275371 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_37597 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:17275320-17275380
64251 chr19 804843 804843 1 + C T STAD 804834 + 804814 804854 41 GCCCGGGACCTGCAGATTTTCTCCAAGTTCGGCACAGTGTT GCCCGGGACCTGCAGATTTTCTCCAAGTTTGGCACAGTGTT < 41bp 1 0.798037177864039 1 0.939312696456909 experiment 0.403925644271923 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804834 chr19:804843 synonymous SNV . 0 30 hm5C_associated_SNPs_37608 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:804820-804860
64251 chr15 42105236 42105236 1 + G A STAD 42105224 + 42105204 42105244 41 GGAAAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGG GGAAAAAAGGCGGACAGTACCTTCTGCATCACATCCTCAGG < 41bp 1 0.27232889934561 1 0.0684618651866913 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42105224 chr15:42105236 synonymous SNV . 0 33 hm5C_associated_SNPs_37612 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:42105229-42105257
64251 chr11 608437 608437 1 + G A STAD 608425 + 608405 608445 41 AGTCGTGGAGCTCAGGCCCCCTTCCCGGTCCCGCTCCACAT AGTCGTGGAGCTCAGGCCCCCTTCCCGGTCCCACTCCACAT < 41bp 1 0.141083897126362 1 0.0714127719402313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608425 chr11:608437 nonsynonymous SNV 0.991 1 33 hm5C_associated_SNPs_37613 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:608407-608445
64251 chr11 598418 598418 1 + G A STAD 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG GTCTTCCCTGCTGGATGAAGCCATCAAGGCTGTGGCGACTG < 41bp 1 0.100167963917179 1 0.146936625242233 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598418 nonsynonymous SNV 0.053 4 26 hm5C_associated_SNPs_37614 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:598400-598420
64251 chr7 99159544 99159544 1 + G A STAD 99159535 + 99159515 99159555 41 ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC ACCTGTTCCTCAGGTGCCTGCTCTTCCCCATGAGGGAAGCC < 41bp 1 0.198647420784369 1 0.0892913043498993 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF655 ENSG00000197343 CDS Human protein_coding chr7:99159535 chr7:99159544 nonsynonymous SNV 0.994 0 30 hm5C_associated_SNPs_37615 0 0 4 SF3A3 POSTAR2 ENCODE chr7:99159432-99159544
64251 chrX 48759706 48759706 1 + C T STAD 48759703 + 48759683 48759723 41 GACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGA GACAGGGAACGGGATCGGGACCGTGGGTATGACAAGGCAGA < 41bp 1 0.288748971675202 1 0.0604234337806702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759703 chrX:48759706 synonymous SNV . 0 24 hm5C_associated_SNPs_37616 1 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chrX 48759706 48759706 1 + C T STAD 48759704 + 48759684 48759724 41 ACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGAC ACAGGGAACGGGATCGGGACCGTGGGTATGACAAGGCAGAC < 41bp 1 0.768180313319993 1 0.527259349822998 experiment 0.463639373360014 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759704 chrX:48759706 synonymous SNV . 0 23 hm5C_associated_SNPs_37617 1 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chrX 48759706 48759706 1 + C T STAD 48759720 + 48759700 48759740 41 GGACCGCGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAG GGACCGTGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAG < 41bp 1 0.589656423865928 1 0.139460146427155 experiment 0.820687152268145 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759720 chrX:48759706 synonymous SNV . 0 7 hm5C_associated_SNPs_37618 1 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr6 26204976 26204976 1 + T C STAD 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCACCCGGCGCCTTGCTCGTCGCGG < 41bp 1 0.538613882376268 1 0.887305021286011 experiment 0.922772235247464 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204976 nonsynonymous SNV 0.008 0 20 hm5C_associated_SNPs_37619 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr17 71232449 71232449 1 + A T STAD 71232445 + 71232425 71232465 41 TGAGACTCCAGAAAAGAACACAGAATCCCTCATTTTAAGCC TGAGACTCCAGAAAAGAACACAGATTCCCTCATTTTAAGCC < 41bp 1 0.214321714758476 1 0.11237370967865 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232445 chr17:71232449 nonsynonymous SNV 0.078 3 25 hm5C_associated_SNPs_37623 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232414-71232454
64251 chr15 91358371 91358371 1 + A T STAD 91358367 + 91358347 91358387 41 TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTG TAGAAAGATATCTTCCAAAACGAATTCCTCCAGCATCATTG < 41bp 1 0.336322649875456 1 0.0383776426315308 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358367 chr15:91358371 nonsynonymous SNV 0.068 2 25 hm5C_associated_SNPs_37624 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:91358357-91358380
64251 chr19 39220032 39220032 1 + A G STAD 39220041 + 39220021 39220061 41 CCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGA CCTCGACTACAGGTCCTTCTCCACGGCCTTGTATGGCGAGA < 41bp 1 0.556020494933336 1 0.442231148481369 experiment 0.887959010133327 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39220041 chr19:39220032 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_37625 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39219999-39220032
64251 chr16 457459 457459 1 + G A STAD 457472 + 457452 457492 41 GGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC GGCCGGCACTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC < 41bp 1 0.773780036541867 1 0.931281328201294 experiment 0.452439926916267 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout DECR2 ENSG00000242612 CDS Human protein_coding chr16:457472 chr16:457459 nonsynonymous SNV 0.377 0 8 hm5C_associated_SNPs_37627 0 0 4 SRSF9 POSTAR2 ENCODE chr16:457453-457544
64251 chr14 21542367 21542367 1 + G A STAD 21542358 + 21542338 21542378 41 TACAAGGCATCAACAAGGACCGGCCAACAGGTCGCCTCAGT TACAAGGCATCAACAAGGACCGGCCAACAAGTCGCCTCAGT < 41bp 1 0.184229757980231 1 0.530306458473206 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21542358 chr14:21542367 nonsynonymous SNV 0.994 1 30 hm5C_associated_SNPs_37628 0 0 1 EIF3H POSTAR2 ENCODE chr14:21542296-21542371
64251 chr5 167826546 167826546 1 + A G STAD 167826565 + 167826545 167826585 41 AAGAGCGTGGCTTTCAGACCCTGAAGAAGTAAGTACACCCT AGGAGCGTGGCTTTCAGACCCTGAAGAAGTAAGTACACCCT < 41bp 1 0.699821605110868 1 0.444326400756836 experiment 0.600356789778264 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WWC1 ENSG00000113645 CDS Human protein_coding chr5:167826565 chr5:167826546 synonymous SNV . 0 2 hm5C_associated_SNPs_37629 0 0 3 BUD13 POSTAR2 ENCODE chr5:167826521-167826588
64251 chr15 42059287 42059287 1 + G A STAD 42059304 + 42059284 42059324 41 GATGCAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGC GATACAGATGGTCAGAGTCTCAAGGTGATGCCTTGTTTGGC < 41bp 1 0.421425842777817 1 0.744897961616516 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059304 chr15:42059287 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_37630 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:42059260-42059297
64251 chr20 57566121 57566121 1 + G A STAD 57566128 + 57566108 57566148 41 TGGACCCTCCTCCGGTTGAACTTGTAAGTTGCTTCTCAAGA TGGACCCTCCTCCAGTTGAACTTGTAAGTTGCTTCTCAAGA < 41bp 1 0.18300119361395 1 0.0509389936923981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NELFCD ENSG00000101158 CDS Human protein_coding chr20:57566128 chr20:57566121 synonymous SNV . 0 14 hm5C_associated_SNPs_37631 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57566062-57566126
64251 chrX 56592133 56592133 1 + C T STAD 56592147 + 56592127 56592167 41 AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCTGGGCT AGGAGGTGACATCAATGCAGCCATTGAAAGGCTGCTGGGCT < 41bp 1 0.0538944178724252 1 0.102249294519424 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592147 chrX:56592133 synonymous SNV . 0 7 hm5C_associated_SNPs_37633 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:56592109-56592145
64251 chr20 3802809 3802809 1 + T A STAD 3802800 + 3802780 3802820 41 CTCATTCACACCTTGAGGGCCCCGAATACTGAGGACACGGG CTCATTCACACCTTGAGGGCCCCGAATACAGAGGACACGGG < 41bp 1 0.427365753053086 1 0.0344438254833221 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3802800 chr20:3802809 synonymous SNV . 0 30 hm5C_associated_SNPs_37634 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:3802803-3802826
64251 chr5 139947625 139947625 1 + G A STAD 139947624 + 139947604 139947644 41 TCCTGCTCGCTGGTGGTCAACGCCGTGCTCTCAGCAGTCCT TCCTGCTCGCTGGTGGTCAACACCGTGCTCTCAGCAGTCCT < 41bp 1 0.73911723197899 1 0.0626412034034729 experiment 0.52176553604202 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139947624 chr5:139947625 nonsynonymous SNV 0.979 3 22 hm5C_associated_SNPs_37635 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:139947585-139947645
64251 chr1 6681475 6681475 1 + C T STAD 6681488 + 6681468 6681508 41 CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTGCATG CAGATGATGATTCCTGGGACCTCGTGACCTGCTTCTGCATG < 41bp 1 0.451450769607199 1 0.0207436978816986 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681488 chr1:6681475 synonymous SNV . 0 8 hm5C_associated_SNPs_37636 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:6681460-6681480
64251 chr15 99673025 99673025 1 + G A STAD 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGGTGTGTCTGACCATGGTTCCTGGAGAGACGC < 41bp 1 0.154430952813723 1 0.106893628835678 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673025 nonsynonymous SNV 0.101 0 23 hm5C_associated_SNPs_37637 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99673013-99673032
64251 chr15 41555004 41555004 1 + G A STAD 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCAC < 41bp 1 0.285328414018218 1 0.203609466552734 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41555004 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_37638 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:41554981-41555009
64251 chr9 131455924 131455924 1 + C T STAD 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGATGAAACGTTCGAGTCAAACGCAGAAT < 41bp 1 0.126465372315428 1 0.104570269584656 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455924 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_37640 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131455914-131455934
64251 chr16 68104974 68104974 1 + G A STAD 68104973 + 68104953 68104993 41 TCTTCCTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG TCTTCCTCAAGGAGGGTCTGCAGCCCCTGGAGGAGGTCATG < 41bp 1 0.182004838661348 1 0.250955700874329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104973 chr16:68104974 nonsynonymous SNV 0.639 0 22 hm5C_associated_SNPs_37641 0 0 2 GRWD1 POSTAR2 ENCODE chr16:68104945-68105006
64251 chr16 68104974 68104974 1 + G A STAD 68104994 + 68104974 68105014 41 GGCCCCTGGAGGAGGTCATGCAGAAATACATCAGATACGTA AGCCCCTGGAGGAGGTCATGCAGAAATACATCAGATACGTA < 41bp 1 0.576590608441207 1 0.420577049255371 experiment 0.846818783117586 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104994 chr16:68104974 nonsynonymous SNV 0.639 0 1 hm5C_associated_SNPs_37642 0 0 2 GRWD1 POSTAR2 ENCODE chr16:68104945-68105006
64251 chr2 32824935 32824935 1 + C T STAD 32824918 + 32824898 32824938 41 TCTTGTGAATCTAGAGACAACTGGTGGTCATAGCGTGCGAT TCTTGTGAATCTAGAGACAACTGGTGGTCATAGCGTGTGAT < 41bp 1 0.204410829917492 1 0.373481869697571 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824918 chr2:32824935 stopgain 0.990 1 38 hm5C_associated_SNPs_37643 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr2 32824935 32824935 1 + C T STAD 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGGTGGTCATAGCGTGTGATTCAATCCAAACCT < 41bp 1 0.145603027707752 1 0.594649732112885 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824935 stopgain 0.990 1 25 hm5C_associated_SNPs_37644 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr3 38524744 38524744 1 + G A STAD 38524735 + 38524715 38524755 41 GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGG GGTGTCCCTGATTCGGAGGTCGGTCAACGACACTACCTCGG < 41bp 1 0.245169712505512 1 0.280530214309692 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524735 chr3:38524744 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_37645 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr1 100480939 100480939 1 + G A STAD 100480954 + 100480934 100480974 41 TCAGGGATATAACCGACTGACCTGGATAGTAGTTGTTCTTC TCAGGAATATAACCGACTGACCTGGATAGTAGTTGTTCTTC < 41bp 1 0.258088655471178 1 0.0523036420345306 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC35A3 ENSG00000117620 CDS Human protein_coding chr1:100480954 chr1:100480939 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_37648 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:100480920-100480941
64251 chr10 43292210 43292210 1 + T C STAD 43292225 + 43292205 43292245 41 GACGATGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC GACGACGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC < 41bp 1 0.349446682918025 1 0.132426857948303 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292225 chr10:43292210 synonymous SNV . 0 6 hm5C_associated_SNPs_37649 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr10 43292210 43292210 1 + T C STAD 43292230 + 43292210 43292250 41 TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG CGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG < 41bp 1 0.796822837135969 1 0.823641657829285 experiment 0.406354325728062 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292230 chr10:43292210 synonymous SNV . 0 1 hm5C_associated_SNPs_37650 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr6 87967491 87967491 1 + A G STAD 87967481 + 87967461 87967501 41 GATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC GATGGGAAATTTATCTGTAGCAGGTGTTACGGGGCTTTTAC < 41bp 1 0.576059935005431 1 0.617671430110931 experiment 0.847880129989138 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87967481 chr6:87967491 nonsynonymous SNV 0.995 4 31 hm5C_associated_SNPs_37653 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:87967480-87967500
64251 chr9 131105530 131105530 1 + G A STAD 131105522 + 131105502 131105542 41 TTCCTCTACTTGGGATCTGGCGGCTGGCGCTTCATCCGGGT TTCCTCTACTTGGGATCTGGCGGCTGGCACTTCATCCGGGT < 41bp 1 0.592906753746861 1 0.757473766803741 experiment 0.814186492506279 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131105522 chr9:131105530 nonsynonymous SNV 0.999 1 29 hm5C_associated_SNPs_37654 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:131105498-131105539
64251 chr11 65403961 65403961 1 + C A STAD 65403941 + 65403921 65403961 41 GGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCC GGCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCA < 41bp 1 0.0544509815508222 1 0.189748287200928 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403941 chr11:65403961 nonsynonymous SNV 0.581 1 41 hm5C_associated_SNPs_37655 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403961 65403961 1 + C A STAD 65403942 + 65403922 65403962 41 GCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCT GCTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCAT < 41bp 1 0.0851120541882056 1 0.289888024330139 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403942 chr11:65403961 nonsynonymous SNV 0.581 1 40 hm5C_associated_SNPs_37656 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr11 65403961 65403961 1 + C A STAD 65403943 + 65403923 65403963 41 CTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCCTC CTCTGGTGATGGGCGGCCCCCACCTCTGCTGCAGTGGCATC < 41bp 1 0.270269616780279 1 0.26461723446846 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403943 chr11:65403961 nonsynonymous SNV 0.581 1 39 hm5C_associated_SNPs_37657 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:65403917-65403979
64251 chr20 33764042 33764042 1 + G A STAD 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTAGAGCCCATGTCTTCTTCAAAGTGGCTGTGAATGGGAG < 41bp 1 0.64522607796603 1 0.637850701808929 experiment 0.709547844067941 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764042 nonsynonymous SNV 0.977 1 22 hm5C_associated_SNPs_37658 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr3 126741039 126741039 1 + C T STAD 126741032 + 126741012 126741052 41 CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCGCGGGAA CTGGAGGCACAGCGCAGCTTCTCCATGTGCGACCGCGGGAA < 41bp 1 0.664524294191744 1 0.947013020515442 experiment 0.670951411616512 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126741032 chr3:126741039 nonsynonymous SNV 0.980 4 28 hm5C_associated_SNPs_37659 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:126741015-126741050
64251 chr10 105184857 105184857 1 + C T STAD 105184840 + 105184820 105184860 41 GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTCAACGAC GCCACCTGGCAGCTTTCTCCCTGACCTCTCACCTCAATGAC < 41bp 1 0.258365059641087 1 0.085715264081955 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105184840 chr10:105184857 synonymous SNV . 0 38 hm5C_associated_SNPs_37660 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:105184829-105184877
64251 chr19 13051174 13051174 1 + C T STAD 13051158 + 13051138 13051178 41 GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGCCACC GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGTCACC < 41bp 1 0.311563795276692 1 0.457036256790161 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051158 chr19:13051174 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_37661 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051174 13051174 1 + C T STAD 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTCCTGTCACCCAAGAAGATAAAG < 41bp 1 0.179932891306239 1 0.0987732112407684 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051174 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_37662 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051174 13051174 1 + C T STAD 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTGTCACCCAAGAAGATAAAGGATC < 41bp 1 0.427609259106802 1 0.0877532362937927 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051174 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_37663 0 0 45 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr18 55996250 55996250 1 + A T STAD 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTCCTCGGAGTCGGACATTAACATCAGACAGATCAA < 41bp 1 0.149082460262604 1 0.0777093768119812 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996250 nonsynonymous SNV 0.932 2 23 hm5C_associated_SNPs_37664 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr9 109689819 109689819 1 + T C STAD 109689820 + 109689800 109689840 41 CGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA CGGACGGTCAAAGGGGTACCCATTCATTATCAGAAGAAGCA < 41bp 1 0.0210362756811077 1 0.132732182741165 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109689820 chr9:109689819 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_37665 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:109689796-109689820
64251 chr6 32123549 32123549 1 + G A STAD 32123537 + 32123517 32123557 41 TTCTTTCATCTCCCTCTCCTCTCCACAGATGGGACAGTATG TTCTTTCATCTCCCTCTCCTCTCCACAGATGGAACAGTATG < 41bp 1 0.649250969325992 1 0.95546692609787 experiment 0.701498061348016 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control PPT2 ENSG00000221988;ENSG00000258388 CDS Human other chr6:32123537 chr6:32123549 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_37666 0 0 6 BUD13 POSTAR2 ENCODE chr6:32123511-32123562
64251 chr12 122079120 122079120 1 + G A STAD 122079102 + 122079082 122079122 41 AACATCGAGGCGGTGAGCAACGTGCACAATCTCAACTCGGT AACATCGAGGCGGTGAGCAACGTGCACAATCTCAACTCAGT < 41bp 1 0.141758857024241 1 0.118757039308548 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ORAI1 ENSG00000182500 CDS Human other chr12:122079102 chr12:122079120 synonymous SNV . 0 39 hm5C_associated_SNPs_37667 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122079094-122079120
64251 chr5 52204835 52204835 1 + G T STAD 52204817 + 52204797 52204837 41 CTAGTCGGAGCCCCTATGTACATGGGAACAGAGAAGGAGGA CTAGTCGGAGCCCCTATGTACATGGGAACAGAGAAGGATGA < 41bp 1 0.363072350902905 1 0.328538596630096 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ITGA1 ENSG00000213949 CDS Human protein_coding chr5:52204817 chr5:52204835 nonsynonymous SNV 0.990 1 39 hm5C_associated_SNPs_37668 0 0 1 FASTKD2 POSTAR2 ENCODE chr5:52204787-52204872
64251 chr17 54912541 54912541 1 + C T STAD 54912549 + 54912529 54912569 41 CACCACTGGATCCGGGGCAACGTGCCCCTGTGCAGTTACTG CACCACTGGATCTGGGGCAACGTGCCCCTGTGCAGTTACTG < 41bp 1 0.311226883832393 1 0.176509767770767 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKE ENSG00000153933 CDS Human protein_coding chr17:54912549 chr17:54912541 nonsynonymous SNV 0.990 5 13 hm5C_associated_SNPs_37669 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:54912537-54912558
64251 chr6 168314926 168314926 1 + C T STAD 168314938 + 168314918 168314958 41 AGCAAGACCGAGACCTTAGTCGGATCACACTGGATGCTCAA AGCAAGACTGAGACCTTAGTCGGATCACACTGGATGCTCAA < 41bp 1 0.374784937491144 1 0.872965693473816 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168314938 chr6:168314926 stopgain 1.000 1 9 hm5C_associated_SNPs_37671 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168314884-168314936
64251 chr8 28574283 28574283 1 + G A STAD 28574271 + 28574251 28574291 41 CGTTTATGTTACAGAAAATGCAGACATCGCCTGCCTTTACG CGTTTATGTTACAGAAAATGCAGACATCGCCTACCTTTACG < 41bp 1 0.193054050385351 1 0.0856279730796814 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574271 chr8:28574283 nonsynonymous SNV 0.976 5 33 hm5C_associated_SNPs_37674 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574273-28574291
64251 chr12 109604785 109604785 1 + G A STAD 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACACGCTTTGGGGGGGATCAGGTCATCGAGAAGGTACAG < 41bp 1 0.488681972221899 1 0.61039537191391 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604785 nonsynonymous SNV 0.965 0 22 hm5C_associated_SNPs_37675 0 0 3 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr10 127452032 127452032 1 + C T STAD 127452023 + 127452003 127452043 41 GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACT GCCGCCGGCAGTGCAGCGAGCAGCAATGCTGTTCAGTGACT < 41bp 1 0.771744618354115 1 0.235127598047256 experiment 0.456510763291769 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127452023 chr10:127452032 synonymous SNV . 0 30 hm5C_associated_SNPs_37677 0 0 2 GRWD1 POSTAR2 ENCODE chr10:127451970-127452036
64251 chr15 42052726 42052726 1 + G A STAD 42052715 + 42052695 42052735 41 TCCAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT TCCAAGGTTTCCAAAAGTCTCATTCTTACTCAAGTAAGTGT < 41bp 1 0.0214967670715626 1 0.0461910665035248 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42052715 chr15:42052726 nonsynonymous SNV 0.996 1 32 hm5C_associated_SNPs_37679 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr15:42052713-42052734
64251 chr15 41859622 41859622 1 + G A STAD 41859602 + 41859582 41859622 41 GAAGTCCTGGCTGTTGTGGTCCCTGTGCCCCCCTTTACCTG GAAGTCCTGGCTGTTGTGGTCCCTGTGCCCCCCTTTACCTA < 41bp 1 0.250383644518798 1 0.0302310883998871 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41859602 chr15:41859622 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_37680 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41859599-41859637
64251 chr19 39220045 39220045 1 + G A STAD 39220041 + 39220021 39220061 41 CCTCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGA CCTCGACTACAAGTCCTTCTCCACAGCCTTGTATGGCGAGA < 41bp 1 0.628606088581612 1 0.227445214986801 experiment 0.742787822836775 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39220041 chr19:39220045 synonymous SNV . 0 25 hm5C_associated_SNPs_37681 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:39220010-39220069
64251 chr12 56622933 56622933 1 + C T STAD 56622945 + 56622925 56622965 41 TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG TGCAGGCCTGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG < 41bp 1 0.247921908783625 1 0.308130621910095 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622945 chr12:56622933 nonsynonymous SNV 0.992 2 9 hm5C_associated_SNPs_37682 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr12:56622905-56622971
64251 chr21 47831466 47831466 1 + G A STAD 47831456 + 47831436 47831476 41 CTGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGC CTGGAGGCCCTGCAGCAGCGCCTCCAGGGCACAGAGGAGGC < 41bp 1 0.0167577802824456 1 0.144536226987839 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831456 chr21:47831466 nonsynonymous SNV 0.011 0 31 hm5C_associated_SNPs_37684 0 0 1 SF3B1 POSTAR2 ENCODE chr21:47831463-47831500
64251 chr21 47831466 47831466 1 + G A STAD 47831457 + 47831437 47831477 41 TGGAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCT TGGAGGCCCTGCAGCAGCGCCTCCAGGGCACAGAGGAGGCT < 41bp 1 0.309298689647303 1 0.918036460876465 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831457 chr21:47831466 nonsynonymous SNV 0.011 0 30 hm5C_associated_SNPs_37685 0 0 1 SF3B1 POSTAR2 ENCODE chr21:47831463-47831500
64251 chr21 47831466 47831466 1 + G A STAD 47831459 + 47831439 47831479 41 GAGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGC GAGGCCCTGCAGCAGCGCCTCCAGGGCACAGAGGAGGCTGC < 41bp 1 0.210394106266328 1 0.574821770191193 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831459 chr21:47831466 nonsynonymous SNV 0.011 0 28 hm5C_associated_SNPs_37686 0 0 1 SF3B1 POSTAR2 ENCODE chr21:47831463-47831500
64251 chr21 47831466 47831466 1 + G A STAD 47831460 + 47831440 47831480 41 AGGCCCTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCG AGGCCCTGCAGCAGCGCCTCCAGGGCACAGAGGAGGCTGCG < 41bp 1 0.417817585132125 1 0.883466780185699 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831460 chr21:47831466 nonsynonymous SNV 0.011 0 27 hm5C_associated_SNPs_37687 0 0 1 SF3B1 POSTAR2 ENCODE chr21:47831463-47831500
64251 chr21 47831466 47831466 1 + G A STAD 47831465 + 47831445 47831485 41 CTGCAGCAGCGCCTCCAGGGCGCAGAGGAGGCTGCGGAGCT CTGCAGCAGCGCCTCCAGGGCACAGAGGAGGCTGCGGAGCT < 41bp 1 0.227793049924514 1 0.362617582082748 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47831465 chr21:47831466 nonsynonymous SNV 0.011 0 22 hm5C_associated_SNPs_37688 0 0 1 SF3B1 POSTAR2 ENCODE chr21:47831463-47831500
64251 chr3 52326884 52326884 1 + G A STAD 52326903 + 52326883 52326923 41 CGCTGGGGCCGATAGATGTGCTGTTTTTGAGCGGTGGCACC CACTGGGGCCGATAGATGTGCTGTTTTTGAGCGGTGGCACC < 41bp 1 0.266771473514236 1 0.161768853664398 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52326903 chr3:52326884 synonymous SNV . 0 2 hm5C_associated_SNPs_37690 0 0 2 HNRNPM POSTAR2 ENCODE chr3:52326850-52326901
64251 chr19 10940880 10940880 1 + G T STAD 10940869 + 10940849 10940889 41 CGGCCCCCAGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCT CGGCCCCCAGCAGTGAGGGGCCCCACTCCAGTGCCCCCCCT < 41bp 1 0.250178193316559 1 0.143673956394196 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940869 chr19:10940880 nonsynonymous SNV 0.916 5 32 hm5C_associated_SNPs_37692 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr19 10940880 10940880 1 + G T STAD 10940870 + 10940850 10940890 41 GGCCCCCAGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCTG GGCCCCCAGCAGTGAGGGGCCCCACTCCAGTGCCCCCCCTG < 41bp 1 0.156410406726121 1 0.0557902455329895 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940870 chr19:10940880 nonsynonymous SNV 0.916 5 31 hm5C_associated_SNPs_37693 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr19 10940880 10940880 1 + G T STAD 10940871 + 10940851 10940891 41 GCCCCCAGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCTGA GCCCCCAGCAGTGAGGGGCCCCACTCCAGTGCCCCCCCTGA < 41bp 1 0.114164658920515 1 0.108185350894928 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940871 chr19:10940880 nonsynonymous SNV 0.916 5 30 hm5C_associated_SNPs_37694 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr19 10940880 10940880 1 + G T STAD 10940900 + 10940880 10940920 41 GGCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCC TGCCCCCCCTGATTCCTGTTCCCGTGGGGGCAGCAGCCTCC < 41bp 1 0.362905347717881 1 0.147898763418198 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940900 chr19:10940880 nonsynonymous SNV 0.916 5 1 hm5C_associated_SNPs_37695 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr7 44099178 44099178 1 + C T STAD 44099175 + 44099155 44099195 41 GGAGCCGGCGCCCAGCACTCCTCCATGTCTGGTGCAGGCAG GGAGCCGGCGCCCAGCACTCCTCTATGTCTGGTGCAGGCAG < 41bp 1 0.569515130944004 1 0.938760638237 experiment 0.860969738111992 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44099175 chr7:44099178 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_37697 0 0 1 PPIG POSTAR2 ENCODE chr7:44099140-44099187
64251 chr20 62373333 62373333 1 + C T STAD 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GACCTGGCCAGTGACCAGTCCTCTCTGTCCACCCCGTCACC < 41bp 1 0.105908762937232 1 0.0575765073299408 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373333 nonsynonymous SNV 0.719 2 26 hm5C_associated_SNPs_37699 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62373318-62373371
64251 chr11 400009 400009 1 + G A STAD 399996 + 399976 400016 41 GGAACCTTTCATCCAGCGACCACCTGAAGGACCGCCTGGCC GGAACCTTTCATCCAGCGACCACCTGAAGGACCACCTGGCC < 41bp 1 0.278776651695235 1 0.24642476439476 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PKP3 ENSG00000184363 CDS Human protein_coding chr11:399996 chr11:400009 nonsynonymous SNV 0.995 1 34 hm5C_associated_SNPs_37700 0 0 4 FXR2 POSTAR2 ENCODE chr11:399984-400030
64251 chr1 46743801 46743801 1 + T C STAD 46743784 + 46743764 46743804 41 TCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCTGAC TCAACAGCCGTCAGATCCGGCCACCCCCTGATGGTTCCGAC < 41bp 1 0.0715305530825029 1 0.22381055355072 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46743784 chr1:46743801 synonymous SNV . 0 38 hm5C_associated_SNPs_37701 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46743765-46743817
64251 chr4 123748453 123748453 1 + C T STAD 123748458 + 123748438 123748478 41 GGGGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGA GGGGGCTTCTTCCTGTGCATCCACCCCGACGGCCGAGTTGA < 41bp 1 0.153939607566275 1 0.0626850128173828 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748458 chr4:123748453 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_37702 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr4 123748453 123748453 1 + C T STAD 123748462 + 123748442 123748482 41 GCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGG GCTTCTTCCTGTGCATCCACCCCGACGGCCGAGTTGACGGG < 41bp 1 0.70053155698606 1 0.105326235294342 experiment 0.598936886027881 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748462 chr4:123748453 nonsynonymous SNV 0.997 4 12 hm5C_associated_SNPs_37703 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr16 2811591 2811591 1 + G A STAD 2811603 + 2811583 2811623 41 CCCTCTCCGGAAAGGAGCAGCACAGGCCCAGAACCACCTGC CCCTCTCCAGAAAGGAGCAGCACAGGCCCAGAACCACCTGC < 41bp 1 0.343422687479642 1 0.518993735313416 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811603 chr16:2811591 synonymous SNV . 0 9 hm5C_associated_SNPs_37704 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2811556-2811636
64251 chr11 82878523 82878523 1 + C T STAD 82878517 + 82878497 82878537 41 ACTTCCTTGTTGTTGTGCATCAAATTCGACAGCTATTTCAG ACTTCCTTGTTGTTGTGCATCAAATTTGACAGCTATTTCAG < 41bp 1 0.394183062841016 1 0.448924571275711 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCF11 ENSG00000165494 CDS Human protein_coding chr11:82878517 chr11:82878523 stopgain 1.000 1 27 hm5C_associated_SNPs_37705 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:82878520-82878540
64251 chr20 47582548 47582548 1 + A G STAD 47582558 + 47582538 47582578 41 CCTTGTCGTCAGCAGATAATCTGGTATGTTGGTGATCATCC CCTTGTCGTCGGCAGATAATCTGGTATGTTGGTGATCATCC < 41bp 1 0.71175028110898 1 0.107475519180298 experiment 0.576499437782039 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47582558 chr20:47582548 synonymous SNV . 0 11 hm5C_associated_SNPs_37707 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:47582536-47582550
64251 chr22 20079078 20079078 1 + C T STAD 20079093 + 20079073 20079113 41 GCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA GCAGGTGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA < 41bp 1 0.0654864034565069 1 0.130122065544128 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079093 chr22:20079078 nonsynonymous SNV 0.946 3 6 hm5C_associated_SNPs_37708 0 0 14 DGCR8 POSTAR2 GSE39086,GSM955513 chr22:20079060-20079080
64251 chr1 24996743 24996743 1 + C A STAD 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACCGTCTACAAAATGGTCACCAGCTGTACCGGTCAAAAAGG < 41bp 1 0.500498931774476 1 0.454510986804962 experiment 0.999002136451047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996743 nonsynonymous SNV 0.998 1 13 hm5C_associated_SNPs_37709 0 0 4 IGF2BP3 POSTAR2 ENCODE chr1:24996646-24996757
64251 chr10 123845412 123845412 1 + G A STAD 123845420 + 123845400 123845440 41 GCTGCTGAGACTGGTGGCAGCGCTGGTGCAGGAGACCCAGG GCTGCTGAGACTAGTGGCAGCGCTGGTGCAGGAGACCCAGG < 41bp 1 0.314453488128541 1 0.765031337738037 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TACC2 ENSG00000138162 CDS Human protein_coding chr10:123845420 chr10:123845412 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_37711 0 0 1 EIF3H POSTAR2 ENCODE chr10:123845378-123845413
64251 chr6 32945673 32945673 1 + C G STAD 32945671 + 32945651 32945691 41 GAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA GAGGAAAGTAGCAGTGAGAGCTGCTCTGAGGAAGAGGAGGA < 41bp 1 0.46865703260639 1 0.262925267219543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945671 chr6:32945673 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_37712 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:32945531-32945692
64251 chr3 53880617 53880617 1 + T C STAD 53880614 + 53880594 53880634 41 GATCCCGCGCAGTGGCCCGGCGATGTCGCTCGTGCTGCTAA GATCCCGCGCAGTGGCCCGGCGACGTCGCTCGTGCTGCTAA < 41bp 1 0.733023219872201 1 0.472520589828491 experiment 0.533953560255598 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IL17RB ENSG00000056736 CDS Human protein_coding chr3:53880614 chr3:53880617 nonsynonymous SNV 0.033 1 24 hm5C_associated_SNPs_37713 0 0 3 DDX3X POSTAR2 ENCODE chr3:53880613-53880671
64251 chr11 125475553 125475553 1 + T C STAD 125475549 + 125475529 125475569 41 GCCATCTTTTGCATGCTACTCACCTACTACATGTGGATCAA GCCATCTTTTGCATGCTACTCACCCACTACATGTGGATCAA < 41bp 1 0.523027641322682 1 0.285672307014465 experiment 0.953944717354635 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125475549 chr11:125475553 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_37714 0 0 18 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:125475520-125475560
64251 chr14 102455091 102455091 1 + C T STAD 102455097 + 102455077 102455117 41 TGAGAGCTTGGACGCAGGTTCTTCTTGGACAAGCTGAAGAT TGAGAGCTTGGACGTAGGTTCTTCTTGGACAAGCTGAAGAT < 41bp 1 0.0675295445606351 1 0.0880788564682007 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102455097 chr14:102455091 stopgain 0.992 1 15 hm5C_associated_SNPs_37718 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:102455070-102455103
64251 chr19 54711410 54711410 1 + G T STAD 54711401 + 54711381 54711421 41 AGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGCTGG AGGAAGAATGCCAAGAAGGGCCAGGGTGGTGCTGGGGCTGG < 41bp 1 0.772214747904346 1 0.426272034645081 experiment 0.455570504191309 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPS9 ENSG00000170889 CDS Human protein_coding chr19:54711401 chr19:54711410 synonymous SNV . 0 30 hm5C_associated_SNPs_37719 0 0 29 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr19:54711400-54711420
64251 chr8 144332268 144332268 1 + A C STAD 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAGAACCCCTATGAGTGCAGTGAGTGTGGGCGGATCTT < 41bp 1 0.232019752568257 1 0.345592528581619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332268 nonsynonymous SNV 0.913 1 9 hm5C_associated_SNPs_37720 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:144332257-144332293
64251 chr1 171510625 171510625 1 + G A STAD 171510626 + 171510606 171510646 41 GCTTTCTTCCTAAAGGAGAGCCTACAAGGAGAGGCAGAGGG GCTTTCTTCCTAAAGGAGAACCTACAAGGAGAGGCAGAGGG < 41bp 1 0.0183703296336113 1 0.299450695514679 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171510626 chr1:171510625 synonymous SNV . 0 20 hm5C_associated_SNPs_37721 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:171510598-171510633
64251 chr1 171510625 171510625 1 + G A STAD 171510627 + 171510607 171510647 41 CTTTCTTCCTAAAGGAGAGCCTACAAGGAGAGGCAGAGGGG CTTTCTTCCTAAAGGAGAACCTACAAGGAGAGGCAGAGGGG < 41bp 1 0.46921466775927 1 0.682431280612946 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171510627 chr1:171510625 synonymous SNV . 0 19 hm5C_associated_SNPs_37722 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:171510598-171510633
64251 chr16 2569560 2569560 1 + C T STAD 2569545 + 2569525 2569565 41 TCTCTTCTCGCCCCCAGGAGCTTCCTCCAGCTGGGCGCCGG TCTCTTCTCGCCCCCAGGAGCTTCCTCCAGCTGGGTGCCGG < 41bp 1 0.207923420113398 1 0.0287701487541199 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569545 chr16:2569560 synonymous SNV . 0 36 hm5C_associated_SNPs_37724 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:2569540-2569560
64251 chr16 2569560 2569560 1 + C T STAD 2569563 + 2569543 2569583 41 AGCTTCCTCCAGCTGGGCGCCGGCCTGAGCGTGGGCCTGAG AGCTTCCTCCAGCTGGGTGCCGGCCTGAGCGTGGGCCTGAG < 41bp 1 0.537915565255572 1 0.812544107437134 experiment 0.924168869488855 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V0C ENSG00000185883 CDS Human protein_coding chr16:2569563 chr16:2569560 synonymous SNV . 0 18 hm5C_associated_SNPs_37725 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:2569540-2569560
64251 chr1 24782721 24782721 1 + T C STAD 24782707 + 24782687 24782727 41 GGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTT GGGAACCTGCAGCTTGACTACCCCATCTTCTACGCGATGTT < 41bp 1 0.446974364451182 1 0.152356207370758 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24782707 chr1:24782721 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_37730 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:24782699-24782725
64251 chr16 31236013 31236013 1 + G A STAD 31236001 + 31235981 31236021 41 AGGCCCGTGTACCCCTTCTTCGACGTGTGCTGGCACGACAA AGGCCCGTGTACCCCTTCTTCGACGTGTGCTGACACGACAA < 41bp 1 0.70387048020593 1 0.838545560836792 experiment 0.592259039588139 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31236001 chr16:31236013 stopgain 1.000 1 33 hm5C_associated_SNPs_37731 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:31236003-31236020
64251 chr20 60881312 60881312 1 + C T STAD 60881329 + 60881309 60881349 41 CAACCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA CAATCCCCCGATGCCTGGGGCGCTGGGGGCCAGCGGAAGCA < 41bp 1 0.243465740766514 1 0.443653911352158 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60881329 chr20:60881312 synonymous SNV . 0 4 hm5C_associated_SNPs_37733 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:60881300-60881324
64251 chr10 5955763 5955763 1 + A G STAD 5955758 + 5955738 5955778 41 TATCTTCAGGAGAATTCCTGCACTCAGGCCACAAAAGTTAA TATCTTCAGGAGAATTCCTGCACTCGGGCCACAAAAGTTAA < 41bp 1 0.08309370791557 1 0.0819756686687469 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5955758 chr10:5955763 nonsynonymous SNV 0.979 0 26 hm5C_associated_SNPs_37735 0 0 2 SMNDC1 POSTAR2 ENCODE chr10:5955700-5955803
64251 chr17 37358654 37358654 1 + A G STAD 37358657 + 37358637 37358677 41 GGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA GGCTCGATGCCGGAAAAGCACCTTGGCCCGCCGGAAGGGCA < 41bp 1 0.159166463642605 1 0.0478030145168304 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358657 chr17:37358654 nonsynonymous SNV 0.999 0 18 hm5C_associated_SNPs_37736 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358654 37358654 1 + A G STAD 37358663 + 37358643 37358683 41 ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA ATGCCGGAAAAGCACCTTGGCCCGCCGGAAGGGCAGGCACA < 41bp 1 0.273265420139609 1 0.0666538774967194 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358663 chr17:37358654 nonsynonymous SNV 0.999 0 12 hm5C_associated_SNPs_37737 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358654 37358654 1 + A G STAD 37358664 + 37358644 37358684 41 TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT TGCCGGAAAAGCACCTTGGCCCGCCGGAAGGGCAGGCACAT < 41bp 1 0.26508128354448 1 0.102415055036545 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358664 chr17:37358654 nonsynonymous SNV 0.999 0 11 hm5C_associated_SNPs_37738 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr17 37358654 37358654 1 + A G STAD 37358668 + 37358648 37358688 41 GGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGGC GGAAAAGCACCTTGGCCCGCCGGAAGGGCAGGCACATGGGC < 41bp 1 0.798016172174365 1 0.764598429203033 experiment 0.403967655651269 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358668 chr17:37358654 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_37739 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr1 95639441 95639441 1 + C T STAD 95639425 + 95639405 95639445 41 CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCG CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATTAGCG < 41bp 1 0.249109572339758 1 0.31018140912056 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM56;TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 CDS Human other chr1:95639425 chr1:95639441 stopgain 0.996 1 37 hm5C_associated_SNPs_37740 0 0 1 YBX3 POSTAR2 ENCODE chr1:95639424-95639445
64251 chr3 50091792 50091792 1 + C T STAD 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCACTGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG < 41bp 1 0.0725478456417169 1 0.0294938385486603 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091792 stopgain 0.980 0 8 hm5C_associated_SNPs_37742 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:50091779-50091805
64251 chr22 42276824 42276824 1 + C T STAD 42276812 + 42276792 42276832 41 CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAACGTGATCCG CGCCTGGACCTGGCCTGCAGCCTCTCCTGGAATGTGATCCG < 41bp 1 0.0665729192897847 1 0.0680487453937531 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276812 chr22:42276824 nonsynonymous SNV 0.981 0 33 hm5C_associated_SNPs_37743 0 0 5 FMR1 POSTAR2 ENCODE chr22:42276758-42276831
64251 chr2 190320086 190320086 1 + A G STAD 190320076 + 190320056 190320096 41 GCTGGTTTCAGTGAAACTGCCAAAATCCTCAAGCCAGGAAG GCTGGTTTCAGTGAAACTGCCAAAATCCTCGAGCCAGGAAG < 41bp 1 0.626467008980839 1 0.571805000305176 experiment 0.747065982038322 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR75 ENSG00000115368 CDS Human protein_coding chr2:190320076 chr2:190320086 synonymous SNV . 0 31 hm5C_associated_SNPs_37744 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190320066-190320103
64251 chr19 34868778 34868778 1 + G A STAD 34868761 + 34868741 34868781 41 GGCCCAGCTGAACCCCGAGTCCTCCCTGTTCATCATTGCCT GGCCCAGCTGAACCCCGAGTCCTCCCTGTTCATCATTACCT < 41bp 1 0.0310069427781602 1 0.0320827662944794 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868761 chr19:34868778 nonsynonymous SNV 0.611 5 38 hm5C_associated_SNPs_37745 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr19:34868759-34868778
64251 chr2 236817445 236817445 1 + G A STAD 236817455 + 236817435 236817475 41 GAAAGTCCCAGGGAAGAGGCCACCCCGAGCCACGTCAGCCT GAAAGTCCCAAGGAAGAGGCCACCCCGAGCCACGTCAGCCT < 41bp 1 0.100515674889051 1 0.0566975772380829 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236817455 chr2:236817445 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_37746 0 0 4 DDX24 POSTAR2 ENCODE chr2:236817392-236817470
64251 chr1 45267574 45267574 1 + C T STAD 45267571 + 45267551 45267591 41 GGTGGGGGATTTTGGGCTGGCAGCCCGGTTGGAGCCTCCGG GGTGGGGGATTTTGGGCTGGCAGTCCGGTTGGAGCCTCCGG < 41bp 1 0.218437286321373 1 0.198159843683243 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267571 chr1:45267574 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_37747 0 0 5 EFTUD2 POSTAR2 ENCODE chr1:45267538-45267602
64251 chr10 122625206 122625206 1 + G A STAD 122625218 + 122625198 122625238 41 AACTTTACGTGTTCGAAGATCTTATAATAACATTTTTACCA AACTTTACATGTTCGAAGATCTTATAATAACATTTTTACCA < 41bp 1 0.0519389390969793 1 0.102850884199142 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122625218 chr10:122625206 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_37753 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:122625163-122625216
64251 chr20 47639665 47639665 1 + T C STAD 47639658 + 47639638 47639678 41 TTGATACAGACCATTGACAACATTGTGTTCTACCCTGCGAC TTGATACAGACCATTGACAACATTGTGCTCTACCCTGCGAC < 41bp 1 0.106197612917404 1 0.0990519523620605 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47639658 chr20:47639665 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_37754 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47639660-47639679
64251 chr2 207651571 207651571 1 + T A STAD 207651570 + 207651550 207651590 41 GATGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGC GATGAATTACTTTCCCCTGGCACCTTTTAATCAGCTTCTGC < 41bp 1 0.289544100013906 1 0.0635062456130981 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651570 chr2:207651571 synonymous SNV . 0 22 hm5C_associated_SNPs_37755 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr2 207651571 207651571 1 + T A STAD 207651572 + 207651552 207651592 41 TGAATTACTTTCCCCTGGCTCCTTTTAATCAGCTTCTGCAA TGAATTACTTTCCCCTGGCACCTTTTAATCAGCTTCTGCAA < 41bp 1 0.0342656689342255 1 0.0149722397327423 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207651572 chr2:207651571 synonymous SNV . 0 20 hm5C_associated_SNPs_37756 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207651547-207651581
64251 chr12 56420736 56420736 1 + G A STAD 56420731 + 56420711 56420751 41 GAGCCTCACTCCCCTGGGGGCATCCGGCTGCCCAATGGCAA GAGCCTCACTCCCCTGGGGGCATCCAGCTGCCCAATGGCAA < 41bp 1 0.0809022592083556 1 0.0628744959831238 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56420731 chr12:56420736 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_37760 0 0 1 ZNF622 POSTAR2 ENCODE chr12:56420672-56420760
64251 chr16 66976138 66976138 1 + T C STAD 66976124 + 66976104 66976144 41 GCGGACTCCATGTTTGTGATCCCTGCACTCCAAGTAGCACA GCGGACTCCATGTTTGTGATCCCTGCACTCCAAGCAGCACA < 41bp 1 0.102232706100295 1 0.0359751284122467 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66976124 chr16:66976138 nonsynonymous SNV 0.953 1 35 hm5C_associated_SNPs_37761 0 0 2 PRPF8 POSTAR2 ENCODE chr16:66976121-66976223
64251 chr6 42996954 42996954 1 + G C STAD 42996946 + 42996926 42996966 41 CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGTAA CAGGCAAGGACAGGAGACATCTCCCTTTCAGCAAAGAGTAA < 41bp 1 0.429930494168599 1 0.622335910797119 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996946 chr6:42996954 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_37762 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42996843-42996956
64251 chr1 228333243 228333243 1 + C T STAD 228333247 + 228333227 228333267 41 GGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAAGAGC GGCCTGTGGTGCTGAGTGGGCCTTCGGGAGCTGGGAAGAGC < 41bp 1 0.0551328470436281 1 0.175573736429214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333247 chr1:228333243 nonsynonymous SNV 0.320 0 17 hm5C_associated_SNPs_37764 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:228333200-228333300
64251 chr17 80676889 80676889 1 + G T STAD 80676908 + 80676888 80676928 41 GGAGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTG GTAGCGTGCTGGTGATGGAGCACATGGACATGAGGCATCTG < 41bp 1 0.485376705226122 1 0.0667519569396973 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80676908 chr17:80676889 synonymous SNV . 0 2 hm5C_associated_SNPs_37765 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80676862-80676901
64251 chrX 73047073 73047073 1 - G A STAD 73047076 - 73047056 73047096 41 CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA CCTGCCTGATAGGTGCAGAACGTTGGCTATCAGAGCAAGCA < 41bp 1 0.143249383314775 1 0.0770623683929443 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047076 chrX:73047073 . . 0 24 hm5C_associated_SNPs_37767 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chr8 28574480 28574480 1 + A G STAD 28574488 + 28574468 28574508 41 GTGGCCCAGTCCACCTTCTACACTGTCCAGTACAGACCTGG GTGGCCCAGTCCGCCTTCTACACTGTCCAGTACAGACCTGG < 41bp 1 0.270730401962114 1 0.146026164293289 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574488 chr8:28574480 nonsynonymous SNV 0.973 2 13 hm5C_associated_SNPs_37769 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574480-28574520
64251 chr16 2489443 2489443 1 + C T STAD 2489428 + 2489408 2489448 41 GGATGTCTGACCAGCTCCTACCTCCTCTGGGAAAGCGACAG GGATGTCTGACCAGCTCCTACCTCCTCTGGGAAAGTGACAG < 41bp 1 0.022874809402935 1 0.0376834571361542 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNF ENSG00000162063 CDS Human protein_coding chr16:2489428 chr16:2489443 synonymous SNV . 0 36 hm5C_associated_SNPs_37770 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2489405-2489443
64251 chr12 6639960 6639960 1 + C A STAD 6639957 + 6639937 6639977 41 CCAAGCAGGTAGCCAGAGAGCGCCATCAGCCAAGAAACCAT CCAAGCAGGTAGCCAGAGAGCGCAATCAGCCAAGAAACCAT < 41bp 1 0.720339467676812 1 0.458755761384964 experiment 0.559321064646375 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6639957 chr12:6639960 nonsynonymous SNV 0.041 1 24 hm5C_associated_SNPs_37771 0 0 1 DDX24 POSTAR2 ENCODE chr12:6639941-6639966
64251 chr4 30723127 30723127 1 + C T STAD 30723130 + 30723110 30723150 41 GCTCTCGCTCAGCCTGGCGGCCGCCAAGCAGCTCCTCCGGT GCTCTCGCTCAGCCTGGTGGCCGCCAAGCAGCTCCTCCGGT < 41bp 1 0.206879831056621 1 0.079887717962265 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30723130 chr4:30723127 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_37772 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:30723127-30723128
64251 chr2 74077571 74077571 1 + C T STAD 74077580 + 74077560 74077600 41 GATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCAT GATTACTGCAATACAGAGAACGAAGAAGAACTTTTCCTCAT < 41bp 1 0.589424771022545 1 0.603228807449341 experiment 0.82115045795491 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077580 chr2:74077571 synonymous SNV . 0 12 hm5C_associated_SNPs_37773 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:74077545-74077575
64251 chr1 26566316 26566316 1 + C T STAD 26566310 + 26566290 26566330 41 AAATATCCAACTGAGGGGATCTCTCACGTCACTTCACCGAG AAATATCCAACTGAGGGGATCTCTCATGTCACTTCACCGAG < 41bp 1 0.112679772201351 1 0.0644918978214264 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP85 ENSG00000130695 CDS Human protein_coding chr1:26566310 chr1:26566316 synonymous SNV . 0 27 hm5C_associated_SNPs_37774 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:26566290-26566317
64251 chr12 6647006 6647006 1 + T C STAD 6647018 + 6646998 6647038 41 CAAGAAGGTGGTGAAGCAGGCGTCGGAGGGCCCCCTCAAGG CAAGAAGGCGGTGAAGCAGGCGTCGGAGGGCCCCCTCAAGG < 41bp 1 0.478531413264384 1 0.583746612071991 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647018 chr12:6647006 nonsynonymous SNV 0.955 1 9 hm5C_associated_SNPs_37775 0 0 53 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:6646880-6647020
64251 chr15 41247770 41247770 1 + C T STAD 41247789 + 41247769 41247809 41 GCGCCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG GTGCCTGAAGAGGCCATTGCCACGCAGATCCTGGCCTGCCG < 41bp 1 0.788740384200848 1 0.824603319168091 experiment 0.422519231598303 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247789 chr15:41247770 nonsynonymous SNV 0.441 3 2 hm5C_associated_SNPs_37776 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:41247747-41247775
64251 chr8 144332292 144332292 1 + G A STAD 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGACGGATCTT < 41bp 1 0.217480754994503 1 0.227294862270355 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332292 synonymous SNV . 0 33 hm5C_associated_SNPs_37777 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:144332257-144332293
64251 chr1 109772104 109772104 1 + G A STAD 109772124 + 109772104 109772144 41 GGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC AGAGCGGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCC < 41bp 1 0.580154358163321 1 0.808368682861328 experiment 0.839691283673357 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772124 chr1:109772104 synonymous SNV . 0 1 hm5C_associated_SNPs_37778 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109772102-109772128
64251 chr11 988598 988598 1 + A G STAD 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTGCGCCATGTGCGACCGC < 41bp 1 0.571663907938254 1 0.230786472558975 experiment 0.856672184123492 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988598 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_37779 0 0 7 BUD13 POSTAR2 ENCODE chr11:988551-988606
64251 chrX 48457775 48457775 1 + G A STAD 48457763 + 48457743 48457783 41 CTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACC CTTTGAGGATGATCCTCGGGCCCTGGGGGCCCATGGGCACC < 41bp 1 0.160797891083307 1 0.0681198835372925 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457763 chrX:48457775 nonsynonymous SNV 0.998 3 33 hm5C_associated_SNPs_37780 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457775 48457775 1 + G A STAD 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGGGCCCATGGGCACCGTCGTTCTG < 41bp 1 0.146205443784531 1 0.0588482618331909 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457775 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_37781 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457775 48457775 1 + G A STAD 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGGGCCCATGGGCACCGTCGTTCTGT < 41bp 1 0.18689609123279 1 0.214610069990158 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457775 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_37782 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457775 48457775 1 + G A STAD 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGGGCCCATGGGCACCGTCGTTCTGTC < 41bp 1 0.657908298003491 1 0.45886442065239 experiment 0.684183403993018 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457775 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_37783 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chr8 28906535 28906535 1 + T C STAD 28906521 + 28906501 28906541 41 ATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTC ATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGACGATGTC < 41bp 1 0.162391650747259 1 0.0698150396347046 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906521 chr8:28906535 synonymous SNV . 0 35 hm5C_associated_SNPs_37785 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906535 28906535 1 + T C STAD 28906525 + 28906505 28906545 41 GCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACG GCAGAGTCCAGGAGGCCACTCAAACAGTGACGATGTCGACG < 41bp 1 0.301478409318869 1 0.195876657962799 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906525 chr8:28906535 synonymous SNV . 0 31 hm5C_associated_SNPs_37786 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906535 28906535 1 + T C STAD 28906529 + 28906509 28906549 41 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAA AGTCCAGGAGGCCACTCAAACAGTGACGATGTCGACGGGAA < 41bp 1 0.695335860425846 1 0.553985714912415 experiment 0.609328279148307 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906529 chr8:28906535 synonymous SNV . 0 27 hm5C_associated_SNPs_37787 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906535 28906535 1 + T C STAD 28906541 + 28906521 28906561 41 CACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGA CACTCAAACAGTGACGATGTCGACGGGAATGACTACTCTGA < 41bp 1 0.762079870350823 1 0.3194460272789 experiment 0.475840259298355 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906541 chr8:28906535 synonymous SNV . 0 15 hm5C_associated_SNPs_37788 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr8 28906535 28906535 1 + T C STAD 28906553 + 28906533 28906573 41 GATGATGTCGACGGGAATGACTACTCTGAGCAGGTGAGCCC GACGATGTCGACGGGAATGACTACTCTGAGCAGGTGAGCCC < 41bp 1 0.640590449828104 1 0.323295056819916 experiment 0.718819100343792 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906553 chr8:28906535 synonymous SNV . 0 3 hm5C_associated_SNPs_37789 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:28906529-28906544
64251 chr2 219679346 219679346 1 + C T STAD 219679360 + 219679340 219679380 41 CCCCACCGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG CCCCACTGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG < 41bp 1 0.459350611691194 1 0.246145486831665 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679360 chr2:219679346 nonsynonymous SNV 0.580 5 7 hm5C_associated_SNPs_37790 2 0 6 DDX55 POSTAR2 ENCODE chr2:219679273-219679352
64251 chr6 32942267 32942267 1 + C T STAD 32942278 + 32942258 32942298 41 GCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG GCAGGGTTGTTGGGGCTGGGCCCAGAAGCAGCAGCACCAGG < 41bp 1 0.519060072187939 1 0.170149981975555 experiment 0.961879855624121 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32942278 chr6:32942267 synonymous SNV . 0 10 hm5C_associated_SNPs_37791 0 0 38 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:32942239-32942282
64251 chr5 177633848 177633848 1 + C A STAD 177633835 + 177633815 177633855 41 AGAAAATCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAG AGAAAATCTTCGTTGGGGGTCTGAATCCTGAAGACACTGAG < 41bp 1 0.488044327504085 1 0.365784764289856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633835 chr5:177633848 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_37793 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177633802-177633857
64251 chr5 177633848 177633848 1 + C A STAD 177633841 + 177633821 177633861 41 TCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAG TCTTCGTTGGGGGTCTGAATCCTGAAGACACTGAGGAAAAG < 41bp 1 0.590466089743062 1 0.374136239290237 experiment 0.819067820513877 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633841 chr5:177633848 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_37794 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177633802-177633857
64251 chr5 177633848 177633848 1 + C A STAD 177633849 + 177633829 177633869 41 GGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGA GGGGGTCTGAATCCTGAAGACACTGAGGAAAAGATCAGGGA < 41bp 1 0.437125771551946 1 0.162801325321198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633849 chr5:177633848 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_37795 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177633802-177633857
64251 chr5 177633848 177633848 1 + C A STAD 177633851 + 177633831 177633871 41 GGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGAGT GGGTCTGAATCCTGAAGACACTGAGGAAAAGATCAGGGAGT < 41bp 1 0.606469327072594 1 0.345520794391632 experiment 0.787061345854811 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633851 chr5:177633848 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_37796 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177633802-177633857
64251 chr1 26883500 26883500 1 + T C STAD 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGCCGTGAGATCAAGCCACCCTTCAAGCCAGC < 41bp 1 0.29113478305333 1 0.657487571239471 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883500 synonymous SNV . 0 12 hm5C_associated_SNPs_37797 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr17 4701657 4701657 1 + G A STAD 4701676 + 4701656 4701696 41 GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT GACAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT < 41bp 1 0.705197473326576 1 0.662781834602356 experiment 0.589605053346848 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701676 chr17:4701657 synonymous SNV . 0 2 hm5C_associated_SNPs_37798 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:4701623-4701661
64251 chr9 2186173 2186173 1 + G T STAD 2186154 + 2186134 2186174 41 GAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG GAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGATG < 41bp 1 0.237480261794933 1 0.085186630487442 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186154 chr9:2186173 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_37799 0 0 3 TRA2A POSTAR2 ENCODE chr9:2186120-2186222
64251 chr9 2186173 2186173 1 + G T STAD 2186155 + 2186135 2186175 41 AGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGGA AGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGATGA < 41bp 1 0.324110910503933 1 0.588355481624603 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186155 chr9:2186173 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_37800 0 0 3 TRA2A POSTAR2 ENCODE chr9:2186120-2186222
64251 chr9 2186173 2186173 1 + G T STAD 2186182 + 2186162 2186202 41 GAAGAGAGTGAGGATGAAAGCAATGAAGAGGAGGAAGAGGA GAAGAGAGTGATGATGAAAGCAATGAAGAGGAGGAAGAGGA < 41bp 1 0.261531025400006 1 0.346851944923401 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186182 chr9:2186173 nonsynonymous SNV 0.997 1 12 hm5C_associated_SNPs_37801 0 0 3 TRA2A POSTAR2 ENCODE chr9:2186120-2186222
64251 chr10 70968476 70968476 1 + G T STAD 70968483 + 70968463 70968503 41 AAATGTCTGAGACGCATAAGCTGTTGAATTTGGAGGGCTTT AAATGTCTGAGACTCATAAGCTGTTGAATTTGGAGGGCTTT < 41bp 1 0.327298488173867 1 0.184949100017548 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968483 chr10:70968476 synonymous SNV . 0 14 hm5C_associated_SNPs_37802 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:70968452-70968490
64251 chr20 43243338 43243338 1 + C T STAD 43243326 + 43243306 43243346 41 AAGCTGGCTGGAGACATGGGCGAGCTGGCACTCGAGGGGGC AAGCTGGCTGGAGACATGGGCGAGCTGGCACTTGAGGGGGC < 41bp 1 0.677398179379485 1 0.442978084087372 experiment 0.64520364124103 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKIG ENSG00000168734 CDS Human protein_coding chr20:43243326 chr20:43243338 synonymous SNV . 0 33 hm5C_associated_SNPs_37803 0 0 2 GRWD1 POSTAR2 ENCODE chr20:43243280-43243351
64251 chr16 56966259 56966259 1 + G A STAD 56966261 + 56966241 56966281 41 GACCGCGGCTGGAGTGTGGGCCACCTCAAGGCCCACCTGAG GACCGCGGCTGGAGTGTGAGCCACCTCAAGGCCCACCTGAG < 41bp 1 0.38873594477801 1 0.106992214918137 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966261 chr16:56966259 nonsynonymous SNV 0.983 0 19 hm5C_associated_SNPs_37804 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56966224-56966259
64251 chr16 56966259 56966259 1 + G A STAD 56966262 + 56966242 56966282 41 ACCGCGGCTGGAGTGTGGGCCACCTCAAGGCCCACCTGAGC ACCGCGGCTGGAGTGTGAGCCACCTCAAGGCCCACCTGAGC < 41bp 1 0.675764605365647 1 0.271750032901764 experiment 0.648470789268706 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966262 chr16:56966259 nonsynonymous SNV 0.983 0 18 hm5C_associated_SNPs_37805 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56966224-56966259
64251 chr16 56966259 56966259 1 + G A STAD 56966272 + 56966252 56966292 41 GAGTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACC GAGTGTGAGCCACCTCAAGGCCCACCTGAGCCGCGTCTACC < 41bp 1 0.223060466337377 1 0.0781300663948059 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966272 chr16:56966259 nonsynonymous SNV 0.983 0 8 hm5C_associated_SNPs_37806 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56966224-56966259
64251 chr16 56966259 56966259 1 + G A STAD 56966273 + 56966253 56966293 41 AGTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCC AGTGTGAGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCC < 41bp 1 0.422579458387799 1 0.0529174208641052 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966273 chr16:56966259 nonsynonymous SNV 0.983 0 7 hm5C_associated_SNPs_37807 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56966224-56966259
64251 chr16 56966259 56966259 1 + G A STAD 56966274 + 56966254 56966294 41 GTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCCC GTGTGAGCCACCTCAAGGCCCACCTGAGCCGCGTCTACCCC < 41bp 1 0.668035752586632 1 0.0339752733707428 experiment 0.663928494826736 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966274 chr16:56966259 nonsynonymous SNV 0.983 0 6 hm5C_associated_SNPs_37808 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56966224-56966259
64251 chr4 57340534 57340534 1 + T C STAD 57340545 + 57340525 57340565 41 ACCAGGCCATGAAAATCCTACAAAAAGCTGAAGGTTGGAAG ACCAGGCCACGAAAATCCTACAAAAAGCTGAAGGTTGGAAG < 41bp 1 0.528787363807641 1 0.340191006660461 experiment 0.942425272384719 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340545 chr4:57340534 nonsynonymous SNV 0.996 1 10 hm5C_associated_SNPs_37809 0 0 4 GRWD1 POSTAR2 ENCODE chr4:57340494-57340538
64251 chr16 67316181 67316181 1 + A G STAD 67316185 + 67316165 67316205 41 GGCTGGCATGGCTACAATGCCAGGGGGGCCGGGAGCTGACA GGCTGGCATGGCTACAGTGCCAGGGGGGCCGGGAGCTGACA < 41bp 1 0.725647999633505 1 0.951493501663208 experiment 0.548704000732989 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67316185 chr16:67316181 synonymous SNV . 0 17 hm5C_associated_SNPs_37811 0 0 1 PPIG POSTAR2 ENCODE chr16:67316176-67316214
64251 chr6 15496755 15496755 1 + G T STAD 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCGGCAGCTGCGGGAGGGCCTGCAGCTTCGGGAGGGGCT < 41bp 1 0.0655747239415851 1 0.20501697063446 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496755 synonymous SNV . 0 30 hm5C_associated_SNPs_37817 0 0 18 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr6 15496755 15496755 1 + G T STAD 15496765 + 15496745 15496785 41 GCCTGCAGCTGCGGGAGGGGCTGCGGAACTCCAAGAGGAGA GCCTGCAGCTTCGGGAGGGGCTGCGGAACTCCAAGAGGAGA < 41bp 1 0.657541902841375 1 0.40734788775444 experiment 0.684916194317249 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496765 chr6:15496755 synonymous SNV . 0 11 hm5C_associated_SNPs_37818 0 0 18 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr1 223943271 223943271 1 + G A STAD 223943279 + 223943259 223943299 41 TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG TGCACCTTCCTGATGGGGCTCATTCAGAAGCACCGACGGCG < 41bp 1 0.0521177731039747 1 0.0619589388370514 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943279 chr1:223943271 nonsynonymous SNV 0.999 5 13 hm5C_associated_SNPs_37820 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr17 55083545 55083545 1 + C T STAD 55083541 + 55083521 55083561 41 TGTTTTTTTCTAGGTTCCTTCTGACCAAGGGGACATGGCTC TGTTTTTTTCTAGGTTCCTTCTGATCAAGGGGACATGGCTC < 41bp 1 0.363265322908305 1 0.401621013879776 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55083541 chr17:55083545 synonymous SNV . 0 25 hm5C_associated_SNPs_37822 0 0 1 RPS3 POSTAR2 ENCODE chr17:55083531-55083637
64251 chr22 24573539 24573539 1 + C A STAD 24573545 + 24573525 24573565 41 AGTGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAG AGTGAGACTCAGCCACTGAGCTCTCCCCCAACAGCTGCCAG < 41bp 1 0.0899451025822109 1 0.368160486221313 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573545 chr22:24573539 synonymous SNV . 0 15 hm5C_associated_SNPs_37823 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573539 24573539 1 + C A STAD 24573547 + 24573527 24573567 41 TGAGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCT TGAGACTCAGCCACTGAGCTCTCCCCCAACAGCTGCCAGCT < 41bp 1 0.112151135191555 1 0.204703629016876 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573547 chr22:24573539 synonymous SNV . 0 13 hm5C_associated_SNPs_37824 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573539 24573539 1 + C A STAD 24573549 + 24573529 24573569 41 AGACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCC AGACTCAGCCACTGAGCTCTCCCCCAACAGCTGCCAGCTCC < 41bp 1 0.151581801947864 1 0.648534417152405 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573549 chr22:24573539 synonymous SNV . 0 11 hm5C_associated_SNPs_37825 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573539 24573539 1 + C A STAD 24573550 + 24573530 24573570 41 GACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCA GACTCAGCCACTGAGCTCTCCCCCAACAGCTGCCAGCTCCA < 41bp 1 0.177631419395093 1 0.215960502624512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573550 chr22:24573539 synonymous SNV . 0 10 hm5C_associated_SNPs_37826 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr22 24573539 24573539 1 + C A STAD 24573551 + 24573531 24573571 41 ACTCAGCCCCTGAGCTCTCCCCCAACAGCTGCCAGCTCCAA ACTCAGCCACTGAGCTCTCCCCCAACAGCTGCCAGCTCCAA < 41bp 1 0.248607049609446 1 0.352208018302917 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24573551 chr22:24573539 synonymous SNV . 0 9 hm5C_associated_SNPs_37827 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:24573530-24573558
64251 chr3 32493946 32493946 1 + G A STAD 32493943 + 32493923 32493963 41 ATATGGCTGTCCTATAAGATCTCGTGTGTAACCCAGTCCAC ATATGGCTGTCCTATAAGATCTCATGTGTAACCCAGTCCAC < 41bp 1 0.567444555556415 1 0.0682444870471954 experiment 0.865110888887169 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32493943 chr3:32493946 synonymous SNV . 0 24 hm5C_associated_SNPs_37828 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32493907-32493946
64251 chr3 4856237 4856237 1 + G A STAD 4856235 + 4856215 4856255 41 TAGGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA TAGGAGATGTACTCAGGAAGCCATCCAAAGAGGTAAATTAA < 41bp 1 0.0252146795963585 1 0.37159189581871 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4856235 chr3:4856237 synonymous SNV . 0 23 hm5C_associated_SNPs_37831 0 0 2 DDX24 POSTAR2 ENCODE chr3:4856217-4856241
64251 chr1 26883502 26883502 1 + G A STAD 26883509 + 26883489 26883529 41 AAGCTATACCGTCGTGAGATCAAGCCACCCTTCAAGCCAGC AAGCTATACCGTCATGAGATCAAGCCACCCTTCAAGCCAGC < 41bp 1 0.203969207097739 1 0.414716452360153 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26883509 chr1:26883502 nonsynonymous SNV 0.993 3 14 hm5C_associated_SNPs_37832 0 0 1 SF3B4 POSTAR2 ENCODE chr1:26883491-26883550
64251 chr1 154988858 154988858 1 + C T STAD 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AGGCTTTTGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA < 41bp 1 0.269975643254132 1 0.276586323976517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988858 synonymous SNV . 0 8 hm5C_associated_SNPs_37833 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:154988820-154988864
64251 chr5 176721919 176721919 1 + G A STAD 176721903 + 176721883 176721923 41 AGAAAGGCTGTGTGTCAGATCCTCTTCAGACATCTGGGAAA AGAAAGGCTGTGTGTCAGATCCTCTTCAGACATCTGAGAAA < 41bp 1 0.0459537837897683 1 0.0577418208122253 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176721903 chr5:176721919 nonsynonymous SNV 0.037 3 37 hm5C_associated_SNPs_37834 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:176721885-176721928
64251 chr17 4856581 4856581 1 + G A STAD 4856570 + 4856550 4856590 41 CAAACTCACCCTTCCAGAAACTAAGCGTTGTGGATCAAGAA CAAACTCACCCTTCCAGAAACTAAGCGTTGTAGATCAAGAA < 41bp 1 0.151317528222293 1 0.219303041696548 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856570 chr17:4856581 synonymous SNV . 0 32 hm5C_associated_SNPs_37835 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4856571-4856598
64251 chr8 1806214 1806214 1 + G T STAD 1806226 + 1806206 1806246 41 CCAGAAGCGGACAGACAGGCCCCATCCGCCCCTGAGACAGG CCAGAAGCTGACAGACAGGCCCCATCCGCCCCTGAGACAGG < 41bp 1 0.0830537865016616 1 0.0703998506069183 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1806226 chr8:1806214 synonymous SNV . 0 9 hm5C_associated_SNPs_37836 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:1806210-1806231
64251 chr19 6742993 6742993 1 + G T STAD 6743009 + 6742989 6743029 41 AACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT AACATTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT < 41bp 1 0.702704473646984 1 0.794871211051941 experiment 0.594591052706033 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743009 chr19:6742993 nonsynonymous SNV 0.820 1 5 hm5C_associated_SNPs_37839 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr19:6742978-6743017
64251 chr9 131356530 131356530 1 + C T STAD 131356537 + 131356517 131356557 41 GTTTATGTTGTTCCGTGAAGCGAATGAACTACAGCAATGGA GTTTATGTTGTTCTGTGAAGCGAATGAACTACAGCAATGGA < 41bp 1 0.114148164225035 1 0.457136631011963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131356537 chr9:131356530 nonsynonymous SNV 0.879 4 14 hm5C_associated_SNPs_37840 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr9:131356507-131356533
64251 chr20 37076727 37076727 1 + G A STAD 37076732 + 37076712 37076752 41 TTTGCTCTTTTCTGCGCCTGCATTCGTAAGTGATCACGGGC TTTGCTCTTTTCTGCACCTGCATTCGTAAGTGATCACGGGC < 41bp 1 0.0383805332295664 1 0.0354434549808502 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA71E ENSG00000174365 ncRNA_exonic Human processed_transcript chr20:37076732 chr20:37076727 . . 0 16 hm5C_associated_SNPs_37842 0 0 4 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr20:37076720-37076740
64251 chr19 52714705 52714705 1 + T A STAD 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCAACCCCCG < 41bp 1 0.415003938041549 1 0.0435898900032043 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714705 nonsynonymous SNV 0.994 4 34 hm5C_associated_SNPs_37843 0 0 17 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:52714662-52714713
64251 chr19 52714705 52714705 1 + T A STAD 52714695 + 52714675 52714715 41 ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCAACCCCCGAGT < 41bp 1 0.78532217725382 1 0.860627055168152 experiment 0.429355645492361 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714695 chr19:52714705 nonsynonymous SNV 0.994 4 31 hm5C_associated_SNPs_37844 0 0 17 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:52714662-52714713
64251 chr15 22999351 22999351 1 + G A STAD 22999347 + 22999327 22999367 41 TCCTTTCTGCAGCAAATTGCCATCGCAAGAGAGGGGGACCT TCCTTTCTGCAGCAAATTGCCATCACAAGAGAGGGGGACCT < 41bp 1 0.438792181033445 1 0.493313372135162 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22999347 chr15:22999351 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_37845 0 0 3 FMR1 POSTAR2 ENCODE chr15:22999338-22999400
64251 chr10 70723160 70723160 1 + G A STAD 70723167 + 70723147 70723187 41 GACATTCTCCTTTGCCATCCCTTTGATTGAGAAACTTCATG GACATTCTCCTTTACCATCCCTTTGATTGAGAAACTTCATG < 41bp 1 0.116523048214265 1 0.0421755611896515 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70723167 chr10:70723160 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_37846 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr10:70723084-70723166
64251 chr7 101845106 101845106 1 + C T STAD 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCTGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG < 41bp 1 0.355061357965683 1 0.535694777965546 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845106 synonymous SNV . 0 9 hm5C_associated_SNPs_37847 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr8 99168334 99168334 1 + G A STAD 99168348 + 99168328 99168368 41 CTTTCTGCTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAG CTTTCTACTGTCCCTGGGAGCAGTTAACTCAAGACTGGGAG < 41bp 1 0.22198666260884 1 0.404122918844223 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control POP1 ENSG00000104356 CDS Human protein_coding chr8:99168348 chr8:99168334 nonsynonymous SNV 0.994 0 7 hm5C_associated_SNPs_37849 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:99168303-99168334
64251 chr19 40718828 40718828 1 + C T STAD 40718840 + 40718820 40718860 41 AGAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAG AGAAGGGATGAACGTGGGGGCCCAGCTCCACCCTGCAGAAG < 41bp 1 0.0918399979447835 1 0.142009139060974 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718840 chr19:40718828 stopgain 0.548 1 9 hm5C_associated_SNPs_37850 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718828 40718828 1 + C T STAD 40718841 + 40718821 40718861 41 GAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGG GAAGGGATGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGG < 41bp 1 0.0872102238017462 1 0.0862520337104797 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718841 chr19:40718828 stopgain 0.548 1 8 hm5C_associated_SNPs_37851 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718828 40718828 1 + C T STAD 40718842 + 40718822 40718862 41 AAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGGA AAGGGATGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGGA < 41bp 1 0.158477595975226 1 0.248277962207794 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718842 chr19:40718828 stopgain 0.548 1 7 hm5C_associated_SNPs_37852 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr8 90937493 90937493 1 + T C STAD 90937486 + 90937466 90937506 41 AGCAGTAGTATTGATAGGTTCTCATCCTAATCTGTCTTTTC AGCAGTAGTATTGATAGGTTCTCATCCCAATCTGTCTTTTC < 41bp 1 0.297780365786142 1 0.0643198788166046 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937486 chr8:90937493 synonymous SNV . 0 28 hm5C_associated_SNPs_37853 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr8 90937493 90937493 1 + T C STAD 90937488 + 90937468 90937508 41 CAGTAGTATTGATAGGTTCTCATCCTAATCTGTCTTTTCTG CAGTAGTATTGATAGGTTCTCATCCCAATCTGTCTTTTCTG < 41bp 1 0.14922116737917 1 0.0931101739406586 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937488 chr8:90937493 synonymous SNV . 0 26 hm5C_associated_SNPs_37854 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr8 90937493 90937493 1 + T C STAD 90937491 + 90937471 90937511 41 TAGTATTGATAGGTTCTCATCCTAATCTGTCTTTTCTGAAG TAGTATTGATAGGTTCTCATCCCAATCTGTCTTTTCTGAAG < 41bp 1 0.514412590482161 1 0.411385178565979 experiment 0.971174819035677 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937491 chr8:90937493 synonymous SNV . 0 23 hm5C_associated_SNPs_37855 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr8 90937493 90937493 1 + T C STAD 90937492 + 90937472 90937512 41 AGTATTGATAGGTTCTCATCCTAATCTGTCTTTTCTGAAGG AGTATTGATAGGTTCTCATCCCAATCTGTCTTTTCTGAAGG < 41bp 1 0.144488597853608 1 0.153411358594894 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937492 chr8:90937493 synonymous SNV . 0 22 hm5C_associated_SNPs_37856 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr8 90937493 90937493 1 + T C STAD 90937497 + 90937477 90937517 41 TGATAGGTTCTCATCCTAATCTGTCTTTTCTGAAGGATCAA TGATAGGTTCTCATCCCAATCTGTCTTTTCTGAAGGATCAA < 41bp 1 0.284355105254452 1 0.185324281454086 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937497 chr8:90937493 synonymous SNV . 0 17 hm5C_associated_SNPs_37857 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr8 90937493 90937493 1 + T C STAD 90937501 + 90937481 90937521 41 AGGTTCTCATCCTAATCTGTCTTTTCTGAAGGATCAAGGGT AGGTTCTCATCCCAATCTGTCTTTTCTGAAGGATCAAGGGT < 41bp 1 0.059338805807465 1 0.0411260724067688 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937501 chr8:90937493 synonymous SNV . 0 13 hm5C_associated_SNPs_37858 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937480-90937508
64251 chr12 31244687 31244687 1 + C T STAD 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATGTGGCCACTCGGCAGGCCGCGGGCAT < 41bp 1 0.292983530275172 1 0.0548415184020996 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244687 nonsynonymous SNV 0.253 0 17 hm5C_associated_SNPs_37860 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr7 76112200 76112200 1 + G A STAD 76112193 + 76112173 76112213 41 GAACTGGCCCCGTGTCAGGCCGCTACCGCCACTCCATGACC GAACTGGCCCCGTGTCAGGCCGCTACCACCACTCCATGACC < 41bp 1 0.397551689572041 1 0.300080239772797 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112193 chr7:76112200 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_37861 0 0 2 RBM15 POSTAR2 ENCODE chr7:76112147-76112204
64251 chr22 41923392 41923392 1 + C T STAD 41923388 + 41923368 41923408 41 AGCCTCGCCACCTTGGGGGCCGGGCCATCATCACCAAGAGC AGCCTCGCCACCTTGGGGGCCGGGTCATCATCACCAAGAGC < 41bp 1 0.325830485541647 1 0.486003339290619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923388 chr22:41923392 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_37862 0 0 1 RPS3 POSTAR2 ENCODE chr22:41923359-41923403
64251 chr19 46887108 46887108 1 + C T STAD 46887105 + 46887085 46887125 41 CTCCTCAACATATTCGAGCTCAACGGTTTACCCTCGGAGAC CTCCTCAACATATTCGAGCTCAATGGTTTACCCTCGGAGAC < 41bp 1 0.378362163511455 1 0.160255581140518 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46887105 chr19:46887108 synonymous SNV . 0 24 hm5C_associated_SNPs_37863 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:46887068-46887114
64251 chr17 41570249 41570249 1 + G A STAD 41570239 + 41570219 41570259 41 GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGG GGAGCAGGAGTCAGAGTCCCCCCAAAGACCAGAAGGACCGG < 41bp 1 0.496243597625835 1 0.578436315059662 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570239 chr17:41570249 nonsynonymous SNV 0.997 0 31 hm5C_associated_SNPs_37865 0 0 4 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr17 41570249 41570249 1 + G A STAD 41570240 + 41570220 41570260 41 GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGG GAGCAGGAGTCAGAGTCCCCCCAAAGACCAGAAGGACCGGG < 41bp 1 0.350644009001265 1 0.795562386512756 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570240 chr17:41570249 nonsynonymous SNV 0.997 0 30 hm5C_associated_SNPs_37866 0 0 4 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr1 109642959 109642959 1 + C T STAD 109642947 + 109642927 109642967 41 CGCGCTTGGAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCT CGCGCTTGGAGCGTGTTAGGCGAGTGCGTGCGTCCACCCCT < 41bp 1 0.778287714595066 1 0.685521125793457 experiment 0.443424570809869 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642947 chr1:109642959 . . 0 33 hm5C_associated_SNPs_37867 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642959 109642959 1 + C T STAD 109642953 + 109642933 109642973 41 TGGAGCGTGTTAGGCGAGTGCGTGCGCCCACCCCTGCGCCC TGGAGCGTGTTAGGCGAGTGCGTGCGTCCACCCCTGCGCCC < 41bp 1 0.655844649071367 1 0.664149522781372 experiment 0.688310701857265 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642953 chr1:109642959 . . 0 27 hm5C_associated_SNPs_37868 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642959 109642959 1 + C T STAD 109642957 + 109642937 109642977 41 GCGTGTTAGGCGAGTGCGTGCGCCCACCCCTGCGCCCCTCC GCGTGTTAGGCGAGTGCGTGCGTCCACCCCTGCGCCCCTCC < 41bp 1 0.275468413181548 1 0.598453879356384 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642957 chr1:109642959 . . 0 23 hm5C_associated_SNPs_37869 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642959 109642959 1 + C T STAD 109642965 + 109642945 109642985 41 GGCGAGTGCGTGCGCCCACCCCTGCGCCCCTCCTCCCGCTT GGCGAGTGCGTGCGTCCACCCCTGCGCCCCTCCTCCCGCTT < 41bp 1 0.175207877797721 1 0.198391199111938 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642965 chr1:109642959 . . 0 15 hm5C_associated_SNPs_37870 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109642959 109642959 1 + C T STAD 109642969 + 109642949 109642989 41 AGTGCGTGCGCCCACCCCTGCGCCCCTCCTCCCGCTTACAC AGTGCGTGCGTCCACCCCTGCGCCCCTCCTCCCGCTTACAC < 41bp 1 0.283690259734075 1 0.106959342956543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109642969 chr1:109642959 . . 0 11 hm5C_associated_SNPs_37871 0 0 115 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr6 116600397 116600397 1 - A G STAD 116600405 - 116600385 116600425 41 TGGAGGTAGAGGAGCAGCCGCCAGAAGGTGAAGAAATAGAA TGGAGGTAGAGGAGCAGCCGCCAGAAGGCGAAGAAATAGAA < 41bp 1 0.576142462903432 1 0.565822243690491 experiment 0.847715074193136 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600405 chr6:116600397 synonymous SNV . 0 29 hm5C_associated_SNPs_37872 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:116600360-116600400
64251 chr6 116600397 116600397 1 - A G STAD 116600411 - 116600391 116600431 41 AGCAGATGGAGGTAGAGGAGCAGCCGCCAGAAGGTGAAGAA AGCAGATGGAGGTAGAGGAGCAGCCGCCAGAAGGCGAAGAA < 41bp 1 0.57844424089117 1 0.590896368026733 experiment 0.84311151821766 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600411 chr6:116600397 synonymous SNV . 0 35 hm5C_associated_SNPs_37873 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:116600360-116600400
64251 chr1 36028833 36028833 1 + C T STAD 36028846 + 36028826 36028866 41 ACCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAG ACCTGACTGTTGAAGATGGGCCCCGGGAGATCCTGATCAAG < 41bp 1 0.301184831097097 1 0.060050368309021 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028846 chr1:36028833 synonymous SNV . 0 8 hm5C_associated_SNPs_37874 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36028833 36028833 1 + C T STAD 36028847 + 36028827 36028867 41 CCTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGG CCTGACTGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGG < 41bp 1 0.318852135789213 1 0.238275438547134 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028847 chr1:36028833 synonymous SNV . 0 7 hm5C_associated_SNPs_37875 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr1 36028833 36028833 1 + C T STAD 36028848 + 36028828 36028868 41 CTGACCGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGGA CTGACTGTTGAAGATGGGCCCCGGGAGATCCTGATCAAGGA < 41bp 1 0.461533368096443 1 0.426038295030594 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36028848 chr1:36028833 synonymous SNV . 0 6 hm5C_associated_SNPs_37876 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36028811-36028849
64251 chr2 219609922 219609922 1 + C T STAD 219609940 + 219609920 219609960 41 CCCCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAA CCTCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAA < 41bp 1 0.136628828381836 1 0.0878056883811951 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219609940 chr2:219609922 synonymous SNV . 0 3 hm5C_associated_SNPs_37877 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:219609898-219609931
64251 chr2 219609922 219609922 1 + C T STAD 219609942 + 219609922 219609962 41 CCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAAAC TCCTACCATCTATTTTGGCACTCGGGATGAGAGAGGTAAAC < 41bp 1 0.564405771100169 1 0.123150795698166 experiment 0.871188457799661 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219609942 chr2:219609922 synonymous SNV . 0 1 hm5C_associated_SNPs_37878 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:219609898-219609931
64251 chr10 45486417 45486417 1 + G T STAD 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTTC < 41bp 1 0.0710740261296423 1 0.308285415172577 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486417 nonsynonymous SNV 0.997 1 40 hm5C_associated_SNPs_37879 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr1 116937732 116937732 1 + G T STAD 116937743 + 116937723 116937763 41 TCCTCGCAGGTTTCTGCCACCTCTTTCTGCCAGATGAACAG TCCTCGCAGTTTTCTGCCACCTCTTTCTGCCAGATGAACAG < 41bp 1 0.165917544246089 1 0.115855276584625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116937743 chr1:116937732 nonsynonymous SNV 0.989 5 10 hm5C_associated_SNPs_37883 0 0 9 PTBP1 POSTAR2 GSE57278,GSM1486177 chr1:116937732-116937733
64251 chr3 47891514 47891514 1 + C T STAD 47891507 + 47891487 47891527 41 CAGCGAGCTGGCTGCACTTCCCCCCAGCGTACAGGAGGAGC CAGCGAGCTGGCTGCACTTCCCCCCAGTGTACAGGAGGAGC < 41bp 1 0.253900201520893 1 0.0920470952987671 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47891507 chr3:47891514 synonymous SNV . 0 28 hm5C_associated_SNPs_37884 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:47891494-47891536
64251 chr19 45797635 45797635 1 + G A STAD 45797648 + 45797628 45797668 41 ATGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG ATGACCCACAGAAACACCTACGTTTGCACAGAACGCCCGGG < 41bp 1 0.0429834708602203 1 0.0584037005901337 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797648 chr19:45797635 nonsynonymous SNV 0.999 4 8 hm5C_associated_SNPs_37885 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:45797607-45797638
64251 chr6 27861580 27861580 1 + G T STAD 27861587 + 27861567 27861607 41 GCACGCCGTGTCCGAGGGCACAAAGGCCGTCACCAAGTACA GCACGCCGTGTCCTAGGGCACAAAGGCCGTCACCAAGTACA < 41bp 1 0.615302347147477 1 0.378643333911896 experiment 0.769395305705045 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HIST1H2BO ENSG00000196331 CDS Human other chr6:27861587 chr6:27861580 stopgain 0.996 0 14 hm5C_associated_SNPs_37886 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27861520-27861580
64251 chr8 145736269 145736269 1 + G C STAD 145736271 + 145736251 145736291 41 ATGCGCTGCAGCCAGCTGGCCCCCAGGGCCCTGCAGGTGAG ATGCGCTGCAGCCAGCTGCCCCCCAGGGCCCTGCAGGTGAG < 41bp 1 0.431739060822495 1 0.302342414855957 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736271 chr8:145736269 nonsynonymous SNV 0.986 4 19 hm5C_associated_SNPs_37891 0 0 3 PPIG POSTAR2 ENCODE chr8:145736225-145736286
64251 chr6 44116537 44116537 1 + T G STAD 44116536 + 44116516 44116556 41 CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTCATC CCCACCTTGCCAGGGAGCACCGCTCCATCCGAGGCTTCATC < 41bp 1 0.119766578787391 1 0.753270506858826 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116536 chr6:44116537 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_37892 0 0 2 IGF2BP1 POSTAR2 ENCODE chr6:44116528-44116545
64251 chr13 94679997 94679997 1 + A T STAD 94679996 + 94679976 94680016 41 TCTGCAGGTCAGCCCAACCCCAGGGTGTATCCGTGCCCTCA TCTGCAGGTCAGCCCAACCCCTGGGTGTATCCGTGCCCTCA < 41bp 1 0.690219121390371 1 0.480822652578354 experiment 0.619561757219258 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:94679996 chr13:94679997 synonymous SNV . 0 22 hm5C_associated_SNPs_37896 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:94679980-94680000
64251 chr19 13004403 13004403 1 + C T STAD 13004401 + 13004381 13004421 41 CGATGAGTGTCCAGTCCTCCCTCGTCATGCACCCTATCTAT CGATGAGTGTCCAGTCCTCCCTTGTCATGCACCCTATCTAT < 41bp 1 0.585546976365148 1 0.0280571281909943 experiment 0.828906047269704 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13004401 chr19:13004403 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_37897 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13004400-13004420
64251 chr5 137680803 137680803 1 + G C STAD 137680783 + 137680763 137680803 41 GCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGG GCTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGC < 41bp 1 0.228219500671852 1 0.422744512557983 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680783 chr5:137680803 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_37898 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680784 + 137680764 137680804 41 CTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGA CTGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCA < 41bp 1 0.0803791512857102 1 0.120738536119461 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680784 chr5:137680803 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_37899 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680785 + 137680765 137680805 41 TGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGAC TGGCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCAC < 41bp 1 0.401118489424031 1 0.653673529624939 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680785 chr5:137680803 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_37900 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680787 + 137680767 137680807 41 GCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTC GCAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTC < 41bp 1 0.262886553237884 1 0.0740570425987244 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680787 chr5:137680803 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_37901 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680788 + 137680768 137680808 41 CAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCC CAGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCC < 41bp 1 0.19002602650123 1 0.200404971837997 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680788 chr5:137680803 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_37902 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680789 + 137680769 137680809 41 AGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCC AGCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCCC < 41bp 1 0.0904749438771086 1 0.0932354331016541 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680789 chr5:137680803 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_37903 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680790 + 137680770 137680810 41 GCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCA GCCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCCCA < 41bp 1 0.0951022291533899 1 0.265716403722763 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680790 chr5:137680803 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_37904 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680791 + 137680771 137680811 41 CCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCAT CCGGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCCCAT < 41bp 1 0.798631788758158 1 0.958215713500977 experiment 0.402736422483684 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680791 chr5:137680803 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_37905 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680793 + 137680773 137680813 41 GGTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAA GGTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCCCATAA < 41bp 1 0.51215937477519 1 0.826316356658936 experiment 0.97568125044962 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680793 chr5:137680803 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_37906 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr5 137680803 137680803 1 + G C STAD 137680794 + 137680774 137680814 41 GTGTGGCGGCCCGCCCCCTCCAAGCTGTGGACTCCCATAAA GTGTGGCGGCCCGCCCCCTCCAAGCTGTGCACTCCCATAAA < 41bp 1 0.641796948998617 1 0.61065936088562 experiment 0.716406102002766 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680794 chr5:137680803 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_37907 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:137680799-137680824
64251 chr17 37075007 37075007 1 + G A STAD 37075006 + 37074986 37075026 41 CGGCGACACGGGGATGCTGCCGGCCAACTACGTGGAGGCCA CGGCGACACGGGGATGCTGCCAGCCAACTACGTGGAGGCCA < 41bp 1 0.591564564528038 1 0.12993785738945 experiment 0.816870870943925 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LASP1 ENSG00000002834 CDS Human protein_coding chr17:37075006 chr17:37075007 synonymous SNV . 0 22 hm5C_associated_SNPs_37908 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37075000-37075020
64251 chr16 28844195 28844195 1 + G A STAD 28844200 + 28844180 28844220 41 AACTGAGAAAGTTTGGGGCCCAGTTTAAGGTGAGAGAAGAG AACTGAGAAAGTTTGAGGCCCAGTTTAAGGTGAGAGAAGAG < 41bp 1 0.0666935587221095 1 0.251767992973328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844200 chr16:28844195 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_37909 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:28844179-28844202
64251 chr2 27440776 27440776 1 + G T STAD 27440789 + 27440769 27440809 41 ACCCCGAGGCCCTCACCGATCCCTCCTACAAGGCACAGATC ACCCCGATGCCCTCACCGATCCCTCCTACAAGGCACAGATC < 41bp 1 0.0373320507642073 1 0.207567393779755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27440789 chr2:27440776 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_37911 0 0 4 DDX24 POSTAR2 ENCODE chr2:27440772-27440782
64251 chr1 229770731 229770731 1 + G A STAD 229770748 + 229770728 229770768 41 TTCGATGTTGCCAGGGCATCCTGTCGACACCTGCCCTGGCT TTCAATGTTGCCAGGGCATCCTGTCGACACCTGCCCTGGCT < 41bp 1 0.419655827519867 1 0.609300434589386 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control URB2 ENSG00000135763 CDS Human protein_coding chr1:229770748 chr1:229770731 nonsynonymous SNV 0.897 1 4 hm5C_associated_SNPs_37912 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:229770714-229770747
64251 chr17 74557778 74557778 1 + T C STAD 74557758 + 74557738 74557778 41 TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCT TCCCTGTCTGAAAATCTGGACTGAGGGAAATAATCTATTCC < 41bp 1 0.318986188427417 1 0.119896858930588 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557758 chr17:74557778 . . 0 41 hm5C_associated_SNPs_37913 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 74557778 74557778 1 + T C STAD 74557772 + 74557752 74557792 41 TCTGGACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTT TCTGGACTGAGGGAAATAATCTATTCCGAGGCTTAAGGGTT < 41bp 1 0.238781646447442 1 0.115087062120438 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557772 chr17:74557778 . . 0 27 hm5C_associated_SNPs_37914 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr17 74557778 74557778 1 + T C STAD 74557777 + 74557757 74557797 41 ACTGAGGGAAATAATCTATTCTGAGGCTTAAGGGTTTGGCT ACTGAGGGAAATAATCTATTCCGAGGCTTAAGGGTTTGGCT < 41bp 1 0.320949880833399 1 0.475692451000214 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD1A ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74557777 chr17:74557778 . . 0 22 hm5C_associated_SNPs_37915 0 0 77 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:74557756-74557785
64251 chr14 58669640 58669640 1 + C T STAD 58669641 + 58669621 58669661 41 GATAAAAAGAGCTGGGATGCCTAAGGTATTTAAAAAAAAAT GATAAAAAGAGCTGGGATGTCTAAGGTATTTAAAAAAAAAT < 41bp 1 0.461913787704358 1 0.709139585494995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58669641 chr14:58669640 nonsynonymous SNV 0.933 1 20 hm5C_associated_SNPs_37917 0 0 1 DDX3X POSTAR2 ENCODE chr14:58669572-58669646
64251 chr4 183696226 183696226 1 + A G STAD 183696207 + 183696187 183696227 41 CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCGAGAA CCGACGGTTGCCAAAAGAAACATGACTTTGCCTGGCGAGGA < 41bp 1 0.365163444959239 1 0.182917058467865 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183696207 chr4:183696226 nonsynonymous SNV 0.938 1 40 hm5C_associated_SNPs_37918 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr4:183696220-183696240
64251 chr22 22025326 22025326 1 + G A STAD 22025316 + 22025296 22025336 41 CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGT CAGCCCTTTGTCTACCCAGTCTGCACTCCCAATGGCATCGT < 41bp 1 0.577388890612934 1 0.358881682157516 experiment 0.845222218774132 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22025316 chr22:22025326 nonsynonymous SNV 0.493 1 31 hm5C_associated_SNPs_37919 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:22025279-22025345
64251 chr1 203819736 203819736 1 + C T STAD 203819733 + 203819713 203819753 41 TAAGGCAGTGGAGATGCACGCTGCTGTCATTGCCGCTGTGA TAAGGCAGTGGAGATGCACGCTGTTGTCATTGCCGCTGTGA < 41bp 1 0.506165466388512 1 0.147245705127716 experiment 0.987669067222975 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203819733 chr1:203819736 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_37920 0 0 12 FXR2 POSTAR2 GSE39682,GSM977620 chr1:203819728-203819755
64251 chr3 38287635 38287635 1 + C T STAD 38287619 + 38287599 38287639 41 CTCCAAGTTCCAGAACAGATCTCTGCTCATCTACCTCAGCC CTCCAAGTTCCAGAACAGATCTCTGCTCATCTACCTTAGCC < 41bp 1 0.416852334172717 1 0.0893209874629974 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38287619 chr3:38287635 stopgain 1.000 0 37 hm5C_associated_SNPs_37922 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:38287618-38287650
64251 chr17 80684826 80684826 1 + T C STAD 80684806 + 80684786 80684826 41 AGCAGAGGATTCCTCTGGGCCGGTGATTTTTGACCCAGCTT AGCAGAGGATTCCTCTGGGCCGGTGATTTTTGACCCAGCTC < 41bp 1 0.47547274593904 1 0.471610933542252 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684806 chr17:80684826 nonsynonymous SNV 0.423 4 41 hm5C_associated_SNPs_37923 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:80684814-80684840
64251 chr20 37078014 37078014 1 + C T STAD 37078022 + 37078002 37078042 41 CCCTTGTATACACCTGCATTCAAAAATGATCACGGGCTGCC CCCTTGTATACATCTGCATTCAAAAATGATCACGGGCTGCC < 41bp 1 0.490155152746124 1 0.498522639274597 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078022 chr20:37078014 . . 0 13 hm5C_associated_SNPs_37924 0 0 6 TARDBP POSTAR2 E-MTAB-530,ERR039847-ERR039848 chr20:37078000-37078020
64251 chr11 61632650 61632650 1 + A G STAD 61632668 + 61632648 61632688 41 CAACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTG CAGCTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTG < 41bp 1 0.354172989229734 1 0.169890880584717 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632668 chr11:61632650 nonsynonymous SNV 0.786 2 3 hm5C_associated_SNPs_37925 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:61632640-61632660
64251 chr11 61632650 61632650 1 + A G STAD 61632670 + 61632650 61632690 41 ACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTGCC GCTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTGCC < 41bp 1 0.566378899498093 1 0.337538242340088 experiment 0.867242201003814 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632670 chr11:61632650 nonsynonymous SNV 0.786 2 1 hm5C_associated_SNPs_37926 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:61632640-61632660
64251 chr3 184042123 184042123 1 + T C STAD 184042134 + 184042114 184042154 41 AGAGATGGATGAAGCTGCTACGGTGAGAGAAAACCCACTAT AGAGATGGACGAAGCTGCTACGGTGAGAGAAAACCCACTAT < 41bp 1 0.345168445240072 1 0.491104751825333 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184042134 chr3:184042123 synonymous SNV . 0 10 hm5C_associated_SNPs_37927 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184041989-184042133
64251 chr19 50285901 50285901 1 + C A STAD 50285882 + 50285862 50285902 41 TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCCC TGACCTGGCCAGCCGCAACCCCACCTTCATGTGCCTGGCAC < 41bp 1 0.25478364747461 1 0.218733340501785 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285882 chr19:50285901 synonymous SNV . 0 40 hm5C_associated_SNPs_37928 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50285888-50285911
64251 chr5 137523046 137523046 1 + C T STAD 137523065 + 137523045 137523085 41 CCTACGCTCACGGCGTTCCCCTTTACTCAAATCTGGGCCTT CTTACGCTCACGGCGTTCCCCTTTACTCAAATCTGGGCCTT < 41bp 1 0.494065623342386 1 0.188207715749741 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137523065 chr5:137523046 synonymous SNV . 0 2 hm5C_associated_SNPs_37931 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:137523022-137523049
64251 chr8 11643642 11643642 1 + C T STAD 11643658 + 11643638 11643678 41 CTACCAGAAAGAACAGTGCCCTGCTGGCCACCAGGTCATGA CTACTAGAAAGAACAGTGCCCTGCTGGCCACCAGGTCATGA < 41bp 1 0.443144316260722 1 0.0411266982555389 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11643658 chr8:11643642 stopgain 0.985 1 5 hm5C_associated_SNPs_37932 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:11643633-11643671
64251 chr9 107515233 107515233 1 + T C STAD 107515213 + 107515193 107515233 41 TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAC < 41bp 1 0.776674038453938 1 0.840743362903595 experiment 0.446651923092124 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107515213 chr9:107515233 synonymous SNV . 0 41 hm5C_associated_SNPs_37934 0 0 1 RPS3 POSTAR2 ENCODE chr9:107515197-107515237
64251 chr8 1851473 1851473 1 + C T STAD 1851453 + 1851433 1851473 41 CCTGTTGCTTGTAGGACATGCTGAAGAACACCTCCAAAGGC CCTGTTGCTTGTAGGACATGCTGAAGAACACCTCCAAAGGT < 41bp 1 0.646462579355323 1 0.589993298053741 experiment 0.707074841289353 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1851453 chr8:1851473 synonymous SNV . 0 41 hm5C_associated_SNPs_37935 0 0 1 ZNF622 POSTAR2 ENCODE chr8:1851445-1851489
64251 chr16 69353359 69353359 1 + A C STAD 69353363 + 69353343 69353383 41 AAATCCTACCTGGCCAAAGCCGTGGCAACAGAGGCCAACAA AAATCCTACCTGGCCACAGCCGTGGCAACAGAGGCCAACAA < 41bp 1 0.602566190512395 1 0.762495696544647 experiment 0.79486761897521 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69353363 chr16:69353359 nonsynonymous SNV 0.990 5 17 hm5C_associated_SNPs_37936 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:69353323-69353361
64251 chr11 831623 831623 1 + C T STAD 831625 + 831605 831645 41 AAGGCTCTGACAACAGCCCGCCTGCCTGGGCCCACCTGCTG AAGGCTCTGACAACAGCCTGCCTGCCTGGGCCCACCTGCTG < 41bp 1 0.0975338776469112 1 0.0420100092887878 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831625 chr11:831623 nonsynonymous SNV 0.002 1 19 hm5C_associated_SNPs_37937 0 0 1 LSM11 POSTAR2 ENCODE chr11:831533-831676
64251 chr12 51117073 51117073 1 + G A STAD 51117087 + 51117067 51117107 41 CCTCACGGCCACGCTGCCCACTGTCCGAATGATTGTTGATG CCTCACAGCCACGCTGCCCACTGTCCGAATGATTGTTGATG < 41bp 1 0.113707975644686 1 0.073113739490509 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51117087 chr12:51117073 synonymous SNV . 0 7 hm5C_associated_SNPs_37938 0 0 2 FXR2 POSTAR2 ENCODE chr12:51117018-51117079
64251 chr3 184104636 184104636 1 + C T STAD 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ATGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA < 41bp 1 0.731800280777495 1 0.618069171905518 experiment 0.536399438445011 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104636 stopgain 0.615 1 2 hm5C_associated_SNPs_37939 0 0 1 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr19 16204371 16204371 1 + A G STAD 16204363 + 16204343 16204383 41 CAGTATTCTGAAAAGGAGGACAAATATGAAGAAGAAATTAA CAGTATTCTGAAAAGGAGGACAAATATGGAGAAGAAATTAA < 41bp 1 0.0515819729325548 1 0.210107862949371 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM4 ENSG00000167460 CDS Human protein_coding chr19:16204363 chr19:16204371 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_37942 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:16204370-16204402
64251 chr19 4793212 4793212 1 + G A STAD 4793215 + 4793195 4793235 41 CTACGTGCTTCAGGACCGGGCCGCCAAAGGCAGCCTGGGCA CTACGTGCTTCAGGACCAGGCCGCCAAAGGCAGCCTGGGCA < 41bp 1 0.133257159218843 1 0.123718231916428 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793215 chr19:4793212 nonsynonymous SNV 0.935 0 18 hm5C_associated_SNPs_37943 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4793141-4793239
64251 chr11 114273598 114273598 1 + A G STAD 114273583 + 114273563 114273603 41 CCCACAAGATGTCAGTTTGTCATATCCCCAACATCATGTTG CCCACAAGATGTCAGTTTGTCATATCCCCAACATCGTGTTG < 41bp 1 0.330752647292677 1 0.133279114961624 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273583 chr11:114273598 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_37945 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr11 114273598 114273598 1 + A G STAD 114273589 + 114273569 114273609 41 AGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT AGATGTCAGTTTGTCATATCCCCAACATCGTGTTGGAAATT < 41bp 1 0.643558483342373 1 0.188105940818787 experiment 0.712883033315254 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273589 chr11:114273598 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_37946 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr11 114273598 114273598 1 + A G STAD 114273590 + 114273570 114273610 41 GATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTC GATGTCAGTTTGTCATATCCCCAACATCGTGTTGGAAATTC < 41bp 1 0.348216429727321 1 0.302353709936142 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273590 chr11:114273598 nonsynonymous SNV 1.000 0 29 hm5C_associated_SNPs_37947 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr11 114273598 114273598 1 + A G STAD 114273591 + 114273571 114273611 41 ATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCA ATGTCAGTTTGTCATATCCCCAACATCGTGTTGGAAATTCA < 41bp 1 0.73276139417253 1 0.327758103609085 experiment 0.53447721165494 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273591 chr11:114273598 nonsynonymous SNV 1.000 0 28 hm5C_associated_SNPs_37948 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr11 114273598 114273598 1 + A G STAD 114273594 + 114273574 114273614 41 TCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCAAGC TCAGTTTGTCATATCCCCAACATCGTGTTGGAAATTCAAGC < 41bp 1 0.305817882091759 1 0.0711756944656372 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273594 chr11:114273598 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_37949 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr11 114273598 114273598 1 + A G STAD 114273597 + 114273577 114273617 41 GTTTGTCATATCCCCAACATCATGTTGGAAATTCAAGCCCT GTTTGTCATATCCCCAACATCGTGTTGGAAATTCAAGCCCT < 41bp 1 0.780997462880097 1 0.410175830125809 experiment 0.438005074239807 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273597 chr11:114273598 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_37950 0 0 5 DDX3X POSTAR2 ENCODE chr11:114273549-114273611
64251 chr19 36216189 36216189 1 + C T STAD 36216190 + 36216170 36216210 41 TCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTG TCACCTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCTG < 41bp 1 0.0597182149469713 1 0.112320005893707 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216190 chr19:36216189 synonymous SNV . 0 20 hm5C_associated_SNPs_37952 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216189 36216189 1 + C T STAD 36216191 + 36216171 36216211 41 CACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGT CACCTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCTGT < 41bp 1 0.0969360852172989 1 0.0775115489959717 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216191 chr19:36216189 synonymous SNV . 0 19 hm5C_associated_SNPs_37953 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216189 36216189 1 + C T STAD 36216192 + 36216172 36216212 41 ACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTG ACCTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCTGTG < 41bp 1 0.559620672508831 1 0.624752283096313 experiment 0.880758654982338 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216192 chr19:36216189 synonymous SNV . 0 18 hm5C_associated_SNPs_37954 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216189 36216189 1 + C T STAD 36216193 + 36216173 36216213 41 CCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGT CCTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCTGTGT < 41bp 1 0.129502721111782 1 0.362399101257324 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216193 chr19:36216189 synonymous SNV . 0 17 hm5C_associated_SNPs_37955 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216189 36216189 1 + C T STAD 36216194 + 36216174 36216214 41 CTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGTGTG CTCTGTGCCAGGGGGTCCCCCGATGGTGTGCTTGCTGTGTG < 41bp 1 0.315158603085091 1 0.863245129585266 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216194 chr19:36216189 synonymous SNV . 0 16 hm5C_associated_SNPs_37956 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr21 38865409 38865409 1 + G C STAD 38865404 + 38865384 38865424 41 CCTTGCCATTGATATGTGGTCCCTCGGGTGTATTTTGGTTG CCTTGCCATTGATATGTGGTCCCTCCGGTGTATTTTGGTTG < 41bp 1 0.0772483652839655 1 0.0365063846111298 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38865404 chr21:38865409 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_37958 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:38865394-38865424
64251 chr1 957708 957708 1 + G C STAD 957712 + 957692 957732 41 AACCAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAA AACCAGGTGTCCACTGCGGACACCAGGATCTTCTTTGTGAA < 41bp 1 0.517433108096712 1 0.309218227863312 experiment 0.965133783806577 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957712 chr1:957708 nonsynonymous SNV 0.993 3 17 hm5C_associated_SNPs_37959 0 0 2 LIN28B POSTAR2 ENCODE chr1:957685-957718
64251 chr1 957708 957708 1 + G C STAD 957715 + 957695 957735 41 CAGGTGTCCACTGGGGACACCAGGATCTTCTTTGTGAACCC CAGGTGTCCACTGCGGACACCAGGATCTTCTTTGTGAACCC < 41bp 1 0.569635525547606 1 0.577998101711273 experiment 0.860728948904788 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957715 chr1:957708 nonsynonymous SNV 0.993 3 14 hm5C_associated_SNPs_37960 0 0 2 LIN28B POSTAR2 ENCODE chr1:957685-957718
64251 chr1 957708 957708 1 + G C STAD 957724 + 957704 957744 41 ACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCC ACTGCGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCC < 41bp 1 0.158417348901543 1 0.0819502770900726 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957724 chr1:957708 nonsynonymous SNV 0.993 3 5 hm5C_associated_SNPs_37961 0 0 2 LIN28B POSTAR2 ENCODE chr1:957685-957718
64251 chr16 50342255 50342255 1 + T A STAD 50342243 + 50342223 50342263 41 TTCCCTCCTCTCCAGGACGGCGGCACTGGGTGTGTCCTTCG TTCCCTCCTCTCCAGGACGGCGGCACTGGGTGAGTCCTTCG < 41bp 1 0.52463094570148 1 0.361847698688507 experiment 0.950738108597041 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY7 ENSG00000121281 CDS Human protein_coding chr16:50342243 chr16:50342255 nonsynonymous SNV 0.974 1 33 hm5C_associated_SNPs_37962 0 0 6 DDX24 POSTAR2 ENCODE chr16:50342209-50342325
64251 chr1 24996643 24996643 1 + G C STAD 24996652 + 24996632 24996672 41 GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGT GTCTGTAAGAACGGTCTCATCCTCCCGATCTGTCTCCGGGT < 41bp 1 0.168401826562146 1 0.0423490107059479 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996652 chr1:24996643 nonsynonymous SNV 0.988 4 12 hm5C_associated_SNPs_37963 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr1 24996643 24996643 1 + G C STAD 24996653 + 24996633 24996673 41 TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTC TCTGTAAGAACGGTCTCATCCTCCCGATCTGTCTCCGGGTC < 41bp 1 0.762402909959821 1 0.291382253170013 experiment 0.475194180080357 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996653 chr1:24996643 nonsynonymous SNV 0.988 4 11 hm5C_associated_SNPs_37964 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:24996620-24996680
64251 chr4 20555436 20555436 1 + G A STAD 20555440 + 20555420 20555460 41 TTTTCCAGAGCAATTGGAGCCAACCCTCTTTACTGTGATTG TTTTCCAGAGCAATTGAAGCCAACCCTCTTTACTGTGATTG < 41bp 1 0.12640117370185 1 0.164535760879517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20555440 chr4:20555436 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_37966 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20555433-20555475
64251 chr20 44571763 44571763 1 + A G STAD 44571747 + 44571727 44571767 41 GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCGC GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAGCCGC < 41bp 1 0.413544453140737 1 0.49583226442337 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571747 chr20:44571763 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_37968 0 0 2 PPIG POSTAR2 ENCODE chr20:44571757-44571763
64251 chr3 47050533 47050533 1 + C T STAD 47050517 + 47050497 47050537 41 TCCCTTGCCCATGAAGGTGGCCATCCGCAGCGTGGCCGTGA TCCCTTGCCCATGAAGGTGGCCATCCGCAGCGTGGCTGTGA < 41bp 1 0.0188126347260402 1 0.0552223026752472 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47050517 chr3:47050533 synonymous SNV . 0 37 hm5C_associated_SNPs_37971 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:47050516-47050542
64251 chr7 23235463 23235463 1 + A G STAD 23235473 + 23235453 23235493 41 TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGCTTG TTCAGGTTTTGCAGACATTTCACCAGAGGAATTGAGGCTTG < 41bp 1 0.753295910868662 1 0.580677270889282 experiment 0.493408178262676 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235473 chr7:23235463 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_37972 0 0 14 U2AF2 POSTAR2 GSE83923,CSM2221659 chr7:23235440-23235480
64251 chr5 169127044 169127044 1 + G A STAD 169127059 + 169127039 169127079 41 TGCTGGTGGGTGACATCATTCAGATTCGCAAGGACTATCCA TGCTGATGGGTGACATCATTCAGATTCGCAAGGACTATCCA < 41bp 1 0.435479800432636 1 0.732904493808746 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127059 chr5:169127044 nonsynonymous SNV 0.985 2 6 hm5C_associated_SNPs_37973 0 0 2 DDX24 POSTAR2 ENCODE chr5:169127026-169127118
64251 chr3 10320693 10320693 1 + G A STAD 10320677 + 10320657 10320697 41 CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTC CCCTCACCTTGGCTGCCTTGCGTGAGAACACCAGTCACCTC < 41bp 1 0.740554067384049 1 0.69447660446167 experiment 0.518891865231902 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320677 chr3:10320693 nonsynonymous SNV 0.998 0 37 hm5C_associated_SNPs_37974 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr3 10320693 10320693 1 + G A STAD 10320688 + 10320668 10320708 41 GCTGCCTTGCGTGAGAACACCAGTCGCCTCTACAGTCTTTA GCTGCCTTGCGTGAGAACACCAGTCACCTCTACAGTCTTTA < 41bp 1 0.138186647419065 1 0.103454649448395 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320688 chr3:10320693 nonsynonymous SNV 0.998 0 26 hm5C_associated_SNPs_37975 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr2 47205950 47205950 1 + C T STAD 47205958 + 47205938 47205978 41 ATAACAGCACGTCGAGGCATCTGAAAGGCTGTCACCCGCTT ATAACAGCACGTTGAGGCATCTGAAAGGCTGTCACCCGCTT < 41bp 1 0.569995530773064 1 0.617924571037292 experiment 0.860008938453873 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC7A ENSG00000068724 CDS Human protein_coding chr2:47205958 chr2:47205950 nonsynonymous SNV 0.271 1 13 hm5C_associated_SNPs_37976 0 0 2 DGCR8 POSTAR2 ENCODE chr2:47205935-47205956
64251 chr7 65706170 65706170 1 + T A STAD 65706154 + 65706134 65706174 41 AACTTGTCTTACATCCTGAACGGTGGATGAGAACACTCTTA AACTTGTCTTACATCCTGAACGGTGGATGAGAACACACTTA < 41bp 1 0.253773614547694 1 0.677960395812988 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPST1 ENSG00000169902 CDS Human protein_coding chr7:65706154 chr7:65706170 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_37977 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr7:65706164-65706186
64251 chr9 140110127 140110127 1 + C A STAD 140110114 + 140110094 140110134 41 CCTCCTTCCTGCAATAGGACCTGTCCGGGTGCCCCTCTGGG CCTCCTTCCTGCAATAGGACCTGTCCGGGTGCCACTCTGGG < 41bp 1 0.0377123195492536 1 0.0617672204971313 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110114 chr9:140110127 synonymous SNV . 0 34 hm5C_associated_SNPs_37978 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:140110107-140110145
64251 chr19 50158031 50158031 1 + C G STAD 50158043 + 50158023 50158063 41 CTGGGGGGCTGCGGTTCGACCCCCCCCACCCCCACCGGGCT CTGGGGGGGTGCGGTTCGACCCCCCCCACCCCCACCGGGCT < 41bp 1 0.156623399109144 1 0.182524353265762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158043 chr19:50158031 synonymous SNV . 0 9 hm5C_associated_SNPs_37979 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr19:50158020-50158040
64251 chr7 44733484 44733484 1 + C A STAD 44733465 + 44733445 44733485 41 CGGATGGCCCGCTCCTCCCCCTACCCCACTGACGTGGCCCG CGGATGGCCCGCTCCTCCCCCTACCCCACTGACGTGGCCAG < 41bp 1 0.173037664902974 1 0.309382230043411 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44733465 chr7:44733484 synonymous SNV . 0 40 hm5C_associated_SNPs_37981 0 0 1 FXR2 POSTAR2 ENCODE chr7:44733475-44733499
64251 chr7 44733484 44733484 1 + C A STAD 44733483 + 44733463 44733503 41 CCCTACCCCACTGACGTGGCCCGAGTGGTGAATGCCCCCAT CCCTACCCCACTGACGTGGCCAGAGTGGTGAATGCCCCCAT < 41bp 1 0.653367681848731 1 0.848892569541931 experiment 0.693264636302537 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44733483 chr7:44733484 synonymous SNV . 0 22 hm5C_associated_SNPs_37982 0 0 1 FXR2 POSTAR2 ENCODE chr7:44733475-44733499
64251 chr20 47635531 47635531 1 + C T STAD 47635527 + 47635507 47635547 41 TGACAGCTGGAAGGGTAGACCATACGCAAGTAAGGCCACTT TGACAGCTGGAAGGGTAGACCATATGCAAGTAAGGCCACTT < 41bp 1 0.110990016441337 1 0.263516545295715 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47635527 chr20:47635531 synonymous SNV . 0 25 hm5C_associated_SNPs_37983 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:47635505-47635533
64251 chr19 6366288 6366288 1 + C T STAD 6366276 + 6366256 6366296 41 GGACGTCCCTCAGGGCCAAGCCACAGACATTGCCATCCAGG GGACGTCCCTCAGGGCCAAGCCACAGACATTGTCATCCAGG < 41bp 1 0.348800975047777 1 0.259414315223694 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6366276 chr19:6366288 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_37984 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:6366275-6366302
64251 chr19 6366288 6366288 1 + C T STAD 6366277 + 6366257 6366297 41 GACGTCCCTCAGGGCCAAGCCACAGACATTGCCATCCAGGC GACGTCCCTCAGGGCCAAGCCACAGACATTGTCATCCAGGC < 41bp 1 0.464387161827847 1 0.846078395843506 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6366277 chr19:6366288 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_37985 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:6366275-6366302
64251 chrX 47098545 47098545 1 + C A STAD 47098540 + 47098520 47098560 41 AGGGGACCAGGACTCCAGCACCTTCCCTGGCTGCATCAACA AGGGGACCAGGACTCCAGCACCTTCACTGGCTGCATCAACA < 41bp 1 0.0080765681102961 1 0.0531773865222931 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47098540 chrX:47098545 nonsynonymous SNV 0.929 4 26 hm5C_associated_SNPs_37986 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:47098526-47098562
64251 chr5 132400712 132400712 1 + G A STAD 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TCGTTCAATTGGAACAGCAGCTAAAAGCCAGGTAAAGTTTC < 41bp 1 0.420696339643736 1 0.416877776384354 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400712 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_37987 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132400683-132400729
64251 chr3 47447464 47447464 1 + G A STAD 47447468 + 47447448 47447488 41 CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC CCTTCGCCTACCTACGAGAGCACTTCCCTCAAGCCTACAGC < 41bp 1 0.0839653843797061 1 0.0194356441497803 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447468 chr3:47447464 synonymous SNV . 0 17 hm5C_associated_SNPs_37988 0 0 1 FMR1 POSTAR2 ENCODE chr3:47447434-47447483
64251 chr19 50906824 50906824 1 + G A STAD 50906843 + 50906823 50906863 41 CGTACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT CATACCTCATCTCTCGGGCCCAGACCCTCAAGGTGAGGGCT < 41bp 1 0.0702555718313528 1 0.229276388883591 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906843 chr19:50906824 synonymous SNV . 0 2 hm5C_associated_SNPs_37989 2 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr17 77755530 77755530 1 + G A STAD 77755519 + 77755499 77755539 41 CATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCC CATGAGAAGGAGGTGCAGAACCGGAAGAGAGACAAGAGGCC < 41bp 1 0.696230762268051 1 0.538327991962433 experiment 0.607538475463897 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755519 chr17:77755530 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_37990 0 0 4 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr17 77755530 77755530 1 + G A STAD 77755547 + 77755527 77755567 41 GAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCC GAGACAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCC < 41bp 1 0.418687529785315 1 0.4477778673172 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755547 chr17:77755530 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_37991 0 0 4 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr17 8192690 8192690 1 + G A STAD 8192673 + 8192653 8192693 41 AGAACCTGGCCCTGAGGGGCCGCTGTCAAGAAGCCTGGGTC AGAACCTGGCCCTGAGGGGCCGCTGTCAAGAAGCCTGAGTC < 41bp 1 0.469164824124283 1 0.426478743553162 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RANGRF ENSG00000108961 CDS Human protein_coding chr17:8192673 chr17:8192690 stopgain 0.995 1 38 hm5C_associated_SNPs_37992 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:8192681-8192717
64251 chr8 48883154 48883154 1 + C T STAD 48883170 + 48883150 48883190 41 ACATCTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG ACATTTTGCTGTGTGGCGACCCTGGTACCAGCAAGTCCCAG < 41bp 1 0.284768727478277 1 0.17180523276329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883170 chr8:48883154 synonymous SNV . 0 5 hm5C_associated_SNPs_37993 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr8:48883075-48883173
64251 chr3 169985726 169985726 1 + C T STAD 169985728 + 169985708 169985748 41 ATCTACCGTAGAGGTGCACGCCGCTGGAGAAAGCTTTATTG ATCTACCGTAGAGGTGCATGCCGCTGGAGAAAGCTTTATTG < 41bp 1 0.435471113836865 1 0.489409476518631 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCI ENSG00000163558 CDS Human protein_coding chr3:169985728 chr3:169985726 nonsynonymous SNV 0.981 5 19 hm5C_associated_SNPs_37994 0 0 1 UCHL5 POSTAR2 ENCODE chr3:169985702-169985745
64251 chr12 53412625 53412625 1 + G A STAD 53412624 + 53412604 53412644 41 CGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCA CGATGACGATGTGTATAGGGCACCTCCAATTGACCGTTCCA < 41bp 1 0.300261946209123 1 0.038093090057373 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412624 chr12:53412625 synonymous SNV . 0 22 hm5C_associated_SNPs_37995 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:53412588-53412630
64251 chr12 53412625 53412625 1 + G A STAD 53412626 + 53412606 53412646 41 ATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATC ATGACGATGTGTATAGGGCACCTCCAATTGACCGTTCCATC < 41bp 1 0.0589601516956494 1 0.0332088470458984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53412626 chr12:53412625 synonymous SNV . 0 20 hm5C_associated_SNPs_37996 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:53412588-53412630
64251 chr8 26505233 26505233 1 + C T STAD 26505249 + 26505229 26505269 41 AGGCCGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT AGGCTGCATTGCTGTGGGATCCGATGCCGACCTGGTCATCT < 41bp 1 0.173185708935161 1 0.170735239982605 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505249 chr8:26505233 nonsynonymous SNV 0.987 4 5 hm5C_associated_SNPs_37997 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505227-26505251
64251 chr6 145103188 145103188 1 + G A STAD 145103189 + 145103169 145103209 41 ATGATGGACTTGAGCAAATGCATAAGGACCTGGTCAACGTT ATGATGGACTTGAGCAAATACATAAGGACCTGGTCAACGTT < 41bp 1 0.176789075303461 1 0.158808916807175 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:145103189 chr6:145103188 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_37999 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:145103133-145103205
64251 chr3 51980283 51980283 1 + C A STAD 51980280 + 51980260 51980300 41 GCCATCCTCACTAGTGGGCTCCGCATCATGCCACATTCTGG GCCATCCTCACTAGTGGGCTCCGAATCATGCCACATTCTGG < 41bp 1 0.275221517264603 1 0.21607369184494 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PARP3 ENSG00000041880 CDS Human protein_coding chr3:51980280 chr3:51980283 synonymous SNV . 0 24 hm5C_associated_SNPs_38000 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:51980282-51980314
64251 chr19 45316732 45316732 1 + G A STAD 45316729 + 45316709 45316749 41 AGCCGCACGGTCCGGGAGGCCTCGGGCCTGCTCTCCCTCAC AGCCGCACGGTCCGGGAGGCCTCAGGCCTGCTCTCCCTCAC < 41bp 1 0.717976251270468 1 0.83860445022583 experiment 0.564047497459064 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCAM ENSG00000187244 CDS Human protein_coding chr19:45316729 chr19:45316732 synonymous SNV . 0 24 hm5C_associated_SNPs_38001 0 0 1 PPIG POSTAR2 ENCODE chr19:45316699-45316746
64251 chr17 78335554 78335554 1 + G A STAD 78335559 + 78335539 78335579 41 CCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG CCCAAGAAGTTCGTGAACATCTTTCAGCAGACTCCTCTGGG < 41bp 1 0.0295155994691473 1 0.043266624212265 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78335559 chr17:78335554 nonsynonymous SNV 0.047 0 16 hm5C_associated_SNPs_38002 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:78335540-78335560
64251 chr1 120285539 120285539 1 + G A STAD 120285545 + 120285525 120285565 41 GGGCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCA GGGCTTGGTCCAAGACACTACGCCTGTACTGCAGGGGCTCA < 41bp 1 0.558029083021396 1 0.0922687947750092 experiment 0.883941833957208 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285545 chr1:120285539 nonsynonymous SNV 0.268 2 15 hm5C_associated_SNPs_38005 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr1:120285520-120285540
64251 chr1 120285539 120285539 1 + G A STAD 120285547 + 120285527 120285567 41 GCTTGGTCCAAGGCACTACGCCTGTACTGCAGGGGCTCAAT GCTTGGTCCAAGACACTACGCCTGTACTGCAGGGGCTCAAT < 41bp 1 0.184266814655162 1 0.0359932780265808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120285547 chr1:120285539 nonsynonymous SNV 0.268 2 13 hm5C_associated_SNPs_38006 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr1:120285520-120285540
64251 chr19 18976558 18976558 1 + C T STAD 18976545 + 18976525 18976565 41 ATCTCCATGAGCCAGCCTTCCCAGATGAGCCAGCCCGGCCT ATCTCCATGAGCCAGCCTTCCCAGATGAGCCAGTCCGGCCT < 41bp 1 0.727352063418414 1 0.42777094244957 experiment 0.545295873163173 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976545 chr19:18976558 nonsynonymous SNV 0.999 2 34 hm5C_associated_SNPs_38007 0 0 2 RPS3 POSTAR2 ENCODE chr19:18976531-18976577
64251 chr8 133855000 133855000 1 + C T STAD 133855017 + 133854997 133855037 41 TCTCGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA TCTTGCAGACCCTGGGAGCTCAGATGATGATGATGTTAGTA < 41bp 1 0.542009225543864 1 0.481365948915482 experiment 0.915981548912271 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133855017 chr8:133855000 synonymous SNV . 0 4 hm5C_associated_SNPs_38009 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133854993-133855045
64251 chr16 1556293 1556293 1 + G A STAD 1556292 + 1556272 1556312 41 AGCAGATTCAACTCCGTGGCCGGCCACTTCTTCTTCCCCCT AGCAGATTCAACTCCGTGGCCAGCCACTTCTTCTTCCCCCT < 41bp 1 0.274798184760223 1 0.123012006282806 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1556292 chr16:1556293 nonsynonymous SNV 0.739 4 22 hm5C_associated_SNPs_38010 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:1556276-1556301
64251 chr4 103537599 103537599 1 + C T STAD 103537592 + 103537572 103537612 41 TTGTGCTTTCTCCCCTCAGACGAGCTCCGAGACAGTGACAG TTGTGCTTTCTCCCCTCAGACGAGCTCTGAGACAGTGACAG < 41bp 1 0.450828315434513 1 0.750001192092896 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103537592 chr4:103537599 stopgain 0.840 0 28 hm5C_associated_SNPs_38018 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr4:103537595-103537618
64251 chr8 143782006 143782006 1 + C A STAD 143782018 + 143781998 143782038 41 ACGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCC ACGCCAACATGACTGCGAGACAACGAGATCCAGAGGACTCC < 41bp 1 0.647596162037389 1 0.141574859619141 experiment 0.704807675925222 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LY6K ENSG00000160886 CDS Human protein_coding chr8:143782018 chr8:143782006 nonsynonymous SNV 0.025 1 9 hm5C_associated_SNPs_38019 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chr9 37770016 37770016 1 + G A STAD 37770013 + 37769993 37770033 41 ACCTGACTCCTGACTCAGAACACGGTATGTAGTTGAATGCA ACCTGACTCCTGACTCAGAACACAGTATGTAGTTGAATGCA < 41bp 1 0.492623681749148 1 0.309346258640289 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37770013 chr9:37770016 nonsynonymous SNV 0.845 1 24 hm5C_associated_SNPs_38020 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37769941-37770016
64251 chr22 23438408 23438408 1 + C T STAD 23438428 + 23438408 23438448 41 CTGCGCTCCCGGGACATGACCACGGGCATTGTGGAGAACAA TTGCGCTCCCGGGACATGACCACGGGCATTGTGGAGAACAA < 41bp 1 0.687005110177605 1 0.777146935462952 experiment 0.62598977964479 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438428 chr22:23438408 synonymous SNV . 0 1 hm5C_associated_SNPs_38021 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr11 70275270 70275270 1 + C T STAD 70275262 + 70275242 70275282 41 GGAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGG GGAGAGAGCCCAGCGGATGGCCAAGGAGTGGCAGGAGCAGG < 41bp 1 0.438656559997884 1 0.408257186412811 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275262 chr11:70275270 nonsynonymous SNV 0.989 3 29 hm5C_associated_SNPs_38023 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70275254-70275275
64251 chr11 70275270 70275270 1 + C T STAD 70275263 + 70275243 70275283 41 GAGAGAGCCCAGCGGATGGCCAAGGAGCGGCAGGAGCAGGA GAGAGAGCCCAGCGGATGGCCAAGGAGTGGCAGGAGCAGGA < 41bp 1 0.789431173126191 1 0.824448525905609 experiment 0.421137653747618 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70275263 chr11:70275270 nonsynonymous SNV 0.989 3 28 hm5C_associated_SNPs_38024 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70275254-70275275
64251 chr5 36986016 36986016 1 + T C STAD 36986004 + 36985984 36986024 41 ATAAATCAAGATCTGATAAACTTGGTTTTAAATCACCAACT ATAAATCAAGATCTGATAAACTTGGTTTTAAACCACCAACT < 41bp 1 0.317660189487993 1 0.248887419700623 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36986004 chr5:36986016 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_38026 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:36985999-36986020
64251 chr19 1272159 1272159 1 + G A STAD 1272179 + 1272159 1272199 41 GTGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT ATGCTTGCCCAGAAGAGGCGCATCTGTCCTCTCAGAGCCAT < 41bp 1 0.110678438056324 1 0.0811865031719208 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272179 chr19:1272159 nonsynonymous SNV 0.272 1 1 hm5C_associated_SNPs_38028 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:1272094-1272229
64251 chr11 44129662 44129662 1 + C T STAD 44129673 + 44129653 44129693 41 AATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACAC AATGAACTGTTCATGGCCATCTCAGACAGTGACTACTACAC < 41bp 1 0.572937159974434 1 0.223709166049957 experiment 0.854125680051132 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129673 chr11:44129662 nonsynonymous SNV 0.630 5 10 hm5C_associated_SNPs_38029 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:44129636-44129674
64251 chr8 90937048 90937048 1 + C T STAD 90937042 + 90937022 90937062 41 GGCAACTGGAACGCTGGATTCTCCTGCCCATCTGGAAATTG GGCAACTGGAACGCTGGATTCTCCTGTCCATCTGGAAATTG < 41bp 1 0.730954230792149 1 0.050404816865921 experiment 0.538091538415702 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937042 chr8:90937048 nonsynonymous SNV 0.995 0 27 hm5C_associated_SNPs_38030 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:90937014-90937050
64251 chr12 101012286 101012286 1 + C A STAD 101012291 + 101012271 101012311 41 TTGAGTTAGAAGAGACTTTGCTTAATACTTCTGGGCCTGAA TTGAGTTAGAAGAGAATTTGCTTAATACTTCTGGGCCTGAA < 41bp 1 0.541290184191233 1 0.309516549110413 experiment 0.917419631617534 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101012291 chr12:101012286 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_38031 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:101012270-101012297
64251 chr1 223934706 223934706 1 + G A STAD 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATCAACAGATGCTATGAAGCGCTATCAGGGGGTGCCACCA < 41bp 1 0.74192549148419 1 0.797599256038666 experiment 0.516149017031619 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934706 nonsynonymous SNV 0.706 5 8 hm5C_associated_SNPs_38032 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934706 223934706 1 + G A STAD 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TCAACAGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT < 41bp 1 0.0660307922999492 1 0.0595785677433014 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934706 nonsynonymous SNV 0.706 5 6 hm5C_associated_SNPs_38033 0 0 1 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr4 123145714 123145714 1 + T C STAD 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTCTCCAGCCGAGAGCACACGCTATGTTCTCAGCAGAAGG < 41bp 1 0.418399845451588 1 0.312998533248901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145714 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_38034 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chr5 173378883 173378883 1 + G A STAD 173378893 + 173378873 173378913 41 ATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTT ATGGTTCACAACCACTTGACCCACGAAAAACTATATTTGTT < 41bp 1 0.144637514419746 1 0.18719956278801 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173378893 chr5:173378883 synonymous SNV . 0 11 hm5C_associated_SNPs_38036 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:173378860-173378883
64251 chr17 42636661 42636661 1 + G A STAD 42636652 + 42636632 42636672 41 CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTCTGGAT CTCATGACGCTCATCGTGGGCATCACGTCAGGCTTCTGGAT < 41bp 1 0.258131319751378 1 0.0798180103302002 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636652 chr17:42636661 synonymous SNV . 0 30 hm5C_associated_SNPs_38038 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42636646-42636684
64251 chr12 111072572 111072572 1 + G A STAD 111072570 + 111072550 111072590 41 GCATGGCTTTTTACAGCAGCCCGGAAATTCTGAGGGTAAGA GCATGGCTTTTTACAGCAGCCCAGAAATTCTGAGGGTAAGA < 41bp 1 0.269727902271332 1 0.100321799516678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111072570 chr12:111072572 synonymous SNV . 0 23 hm5C_associated_SNPs_38042 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:111072537-111072575
64251 chr11 44129368 44129368 1 + G A STAD 44129385 + 44129365 44129405 41 CTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA CTGAGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA < 41bp 1 0.268232878635261 1 0.0746234953403473 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129385 chr11:44129368 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_38044 0 0 1 DDX3X POSTAR2 ENCODE chr11:44129348-44129404
64251 chr8 104438300 104438300 1 + C T STAD 104438295 + 104438275 104438315 41 TATTTCTAGGTTGGTGATGACAAAACTGTGAAGCAGTGGAA TATTTCTAGGTTGGTGATGACAAAATTGTGAAGCAGTGGAA < 41bp 1 0.707348465422186 1 0.43095475435257 experiment 0.585303069155628 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438295 chr8:104438300 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_38045 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:104438280-104438308
64251 chr8 104438300 104438300 1 + C T STAD 104438308 + 104438288 104438328 41 GTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCA GTGATGACAAAATTGTGAAGCAGTGGAAAATGGATGGGCCA < 41bp 1 0.417845674735077 1 0.582442939281464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438308 chr8:104438300 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_38046 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:104438280-104438308
64251 chr8 128751149 128751149 1 + G T STAD 128751167 + 128751147 128751187 41 CAGCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGA CATCGCCTTCTCTCCGTCCTCGGATTCTCTGCTCTCCTCGA < 41bp 1 0.64040845209614 1 0.831976771354675 experiment 0.71918309580772 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MYC ENSG00000136997 CDS Human protein_coding chr8:128751167 chr8:128751149 nonsynonymous SNV 0.403 1 3 hm5C_associated_SNPs_38047 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:128751109-128751186
64251 chr11 47602079 47602079 1 + A G STAD 47602077 + 47602057 47602097 41 AATATGCCTTTTCCTTCCAGCCACTGTCAGACCACGGAATG AATATGCCTTTTCCTTCCAGCCGCTGTCAGACCACGGAATG < 41bp 1 0.257193211196369 1 0.0809616148471832 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47602077 chr11:47602079 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_38050 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr11:47602055-47602082
64251 chr5 145641097 145641097 1 + G T STAD 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGGTGACCCAGAATCAGCCCTAATCCAA < 41bp 1 0.441213647649676 1 0.328835964202881 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641097 nonsynonymous SNV 0.997 2 27 hm5C_associated_SNPs_38051 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145641088-145641134
64251 chr3 184040725 184040725 1 + G A STAD 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CCAGAGGGATTGCCACATATCAGTAACGTGGTGCTGGACAA < 41bp 1 0.760039330830995 1 0.25347363948822 experiment 0.47992133833801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040725 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_38052 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chrX 48457787 48457787 1 + G A STAD 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCATTCTG < 41bp 1 0.299710372244213 1 0.0477938055992126 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457787 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_38053 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457787 48457787 1 + G A STAD 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCATTCTGT < 41bp 1 0.282560763691599 1 0.354062914848328 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457787 nonsynonymous SNV 0.997 3 35 hm5C_associated_SNPs_38054 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457787 48457787 1 + G A STAD 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCATTCTGTC < 41bp 1 0.672931954403457 1 0.643774807453156 experiment 0.654136091193085 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457787 nonsynonymous SNV 0.997 3 34 hm5C_associated_SNPs_38055 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chr2 15747341 15747341 1 + C T STAD 15747340 + 15747320 15747360 41 CAAAGTTTCTCCCCAATGCTCCGAAAGCTCTCATTGTTGAA CAAAGTTTCTCCCCAATGCTCTGAAAGCTCTCATTGTTGAA < 41bp 1 0.702774738478627 1 0.175450682640076 experiment 0.594450523042745 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15747340 chr2:15747341 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_38057 0 0 2 U2AF2 POSTAR2 ENCODE chr2:15747277-15747341
64251 chr12 124221713 124221713 1 + G A STAD 124221725 + 124221705 124221745 41 TATCACATGCTGAACATGTGCAGCTTTGACGTGACCAACAA TATCACATACTGAACATGTGCAGCTTTGACGTGACCAACAA < 41bp 1 0.628001984957482 1 0.214054107666016 experiment 0.743996030085037 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124221725 chr12:124221713 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_38058 0 0 2 UCHL5 POSTAR2 ENCODE chr12:124221691-124221747
64251 chr7 39991409 39991409 1 + G A STAD 39991410 + 39991390 39991430 41 CCTAGTCCCTACAGCAGCAGCAGCTGGCGCCGCTCTCGCAG CCTAGTCCCTACAGCAGCAACAGCTGGCGCCGCTCTCGCAG < 41bp 1 0.602881421576493 1 0.474817514419556 experiment 0.794237156847013 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991410 chr7:39991409 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_38059 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:39991384-39991422
64251 chr7 39991409 39991409 1 + G A STAD 39991428 + 39991408 39991448 41 AGCAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCT AACAGCTGGCGCCGCTCTCGCAGTCCCTACAGCCCTGTGCT < 41bp 1 0.213711754295125 1 0.733130574226379 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CDK13 ENSG00000065883 CDS Human protein_coding chr7:39991428 chr7:39991409 nonsynonymous SNV 0.999 1 2 hm5C_associated_SNPs_38060 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:39991384-39991422
64251 chr3 9867556 9867556 1 + C T STAD 9867539 + 9867519 9867559 41 TCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTG TCCAGCGCTGTGAGGACATCCTGCAGCAGCTGCAGGCTGTG < 41bp 1 0.782322190833149 1 0.770667016506195 experiment 0.435355618333701 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9867539 chr3:9867556 synonymous SNV . 0 38 hm5C_associated_SNPs_38061 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:9867551-9867564
64251 chr17 77757732 77757732 1 + C T STAD 77757717 + 77757697 77757737 41 CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGCGGGGA CCAAACCCGAGCTGAAGGATCCCATCCGGAAGAAGTGGGGA < 41bp 1 0.107192741866258 1 0.132395207881927 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77757717 chr17:77757732 nonsynonymous SNV 0.241 2 36 hm5C_associated_SNPs_38062 0 0 1 PPIG POSTAR2 ENCODE chr17:77757695-77757764
64251 chr6 163984567 163984567 1 + C T STAD 163984557 + 163984537 163984577 41 CCTGCGTACTCCTACGCCAGCTGGCCCTACCATAATGCCTT CCTGCGTACTCCTACGCCAGCTGGCCCTACTATAATGCCTT < 41bp 1 0.357445157651036 1 0.384605646133423 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QKI ENSG00000112531 CDS Human protein_coding chr6:163984557 chr6:163984567 synonymous SNV . 0 31 hm5C_associated_SNPs_38063 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:163984567-163984588
64251 chr11 65347694 65347694 1 + C T STAD 65347700 + 65347680 65347720 41 TGAGCTGAGCCTCACTCTTTCCGGGGTGCTGCTGCGGGAGG TGAGCTGAGCCTCATTCTTTCCGGGGTGCTGCTGCGGGAGG < 41bp 1 0.633459825958072 1 0.719172477722168 experiment 0.733080348083855 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EHBP1L1 ENSG00000173442 CDS Human protein_coding chr11:65347700 chr11:65347694 nonsynonymous SNV 0.980 4 15 hm5C_associated_SNPs_38064 0 0 5 FMR1 POSTAR2 ENCODE chr11:65347668-65347709
64251 chr8 61655327 61655327 1 + G A STAD 61655344 + 61655324 61655364 41 ATCGGACAGAGGAATATGGGCCCCAGAAACATGCAGCAGTC ATCAGACAGAGGAATATGGGCCCCAGAAACATGCAGCAGTC < 41bp 1 0.35265007179003 1 0.187385380268097 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHD7 ENSG00000171316 CDS Human protein_coding chr8:61655344 chr8:61655327 nonsynonymous SNV 0.989 2 4 hm5C_associated_SNPs_38065 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:61655294-61655332
64251 chr12 53858560 53858560 1 + G A STAD 53858580 + 53858560 53858600 41 GCAGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATG ACAGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATG < 41bp 1 0.78280417947707 1 0.278047561645508 experiment 0.434391641045859 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53858580 chr12:53858560 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_38066 0 0 25 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:53858540-53858560
64251 chr18 20573460 20573460 1 + A T STAD 20573447 + 20573427 20573467 41 CCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGAATGCATC CCAAAGATTCCCCAGGGGAGCCCTGTTCACAGGTATGCATC < 41bp 1 0.223750610253701 1 0.0409806668758392 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBBP8 ENSG00000101773 CDS Human protein_coding chr18:20573447 chr18:20573460 nonsynonymous SNV 0.119 1 34 hm5C_associated_SNPs_38067 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:20573419-20573496
64251 chr9 5747306 5747306 1 + A C STAD 5747314 + 5747294 5747334 41 TCATTTAGAGTAACCAAGAGCAGGTGTTGCTTCAGGGTGAG TCATTTAGAGTACCCAAGAGCAGGTGTTGCTTCAGGGTGAG < 41bp 1 0.664094206172561 1 0.673990607261658 experiment 0.671811587654878 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RIC1 ENSG00000107036 CDS Human protein_coding chr9:5747314 chr9:5747306 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_38068 0 0 4 DDX24 POSTAR2 ENCODE chr9:5747301-5747347
64251 chr14 78183895 78183895 1 + A G STAD 78183914 + 78183894 78183934 41 AAGATTTTTGAGACTGCAGCCTATTAATAAAGTTAACATAA AGGATTTTTGAGACTGCAGCCTATTAATAAAGTTAACATAA < 41bp 1 0.177094467910038 1 0.0678490400314331 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLIRP ENSG00000119705 CDS Human protein_coding chr14:78183914 chr14:78183895 synonymous SNV . 0 2 hm5C_associated_SNPs_38069 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:78183836-78183921
64251 chr19 59057202 59057202 1 + G A STAD 59057191 + 59057171 59057211 41 ACTGTGTGGAGTGCTCGGAGCCTCTGTGTGAGACCTGTGTA ACTGTGTGGAGTGCTCGGAGCCTCTGTGTGAAACCTGTGTA < 41bp 1 0.0961437788065958 1 0.0517244637012482 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057191 chr19:59057202 synonymous SNV . 0 32 hm5C_associated_SNPs_38070 0 0 36 FMR1 POSTAR2 GSE39682,GSM977616 chr19:59057128-59057229
64251 chr19 59057202 59057202 1 + G A STAD 59057205 + 59057185 59057225 41 TCGGAGCCTCTGTGTGAGACCTGTGTAGAGGCGCACCAGCG TCGGAGCCTCTGTGTGAAACCTGTGTAGAGGCGCACCAGCG < 41bp 1 0.517123062407726 1 0.387230575084686 experiment 0.965753875184549 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59057205 chr19:59057202 synonymous SNV . 0 18 hm5C_associated_SNPs_38071 0 0 36 FMR1 POSTAR2 GSE39682,GSM977616 chr19:59057128-59057229
64251 chr1 222806483 222806483 1 + T C STAD 222806499 + 222806479 222806519 41 CTATTGATGCAAACAAGCAACCAGAGACAGCCGCCGAAGAG CTATCGATGCAAACAAGCAACCAGAGACAGCCGCCGAAGAG < 41bp 1 0.572009542235201 1 0.217526316642761 experiment 0.855980915529598 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222806499 chr1:222806483 synonymous SNV . 0 5 hm5C_associated_SNPs_38072 0 0 2 FASTKD2 POSTAR2 ENCODE chr1:222806445-222806528
64251 chr2 32828139 32828139 1 + A C STAD 32828127 + 32828107 32828147 41 GACCAGAAGAGAAGTGGAATCCTCAGACCTCAAGCTTTTTG GACCAGAAGAGAAGTGGAATCCTCAGACCTCACGCTTTTTG < 41bp 1 0.111970950943782 1 0.224428415298462 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32828127 chr2:32828139 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_38073 0 0 2 PRPF8 POSTAR2 ENCODE chr2:32828089-32828154
64251 chr6 18213945 18213945 1 + T C STAD 18213957 + 18213937 18213977 41 TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG TGACTTTTCTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG < 41bp 1 0.436184813499215 1 0.429173529148102 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213957 chr6:18213945 nonsynonymous SNV 1.000 5 9 hm5C_associated_SNPs_38074 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr6 18213945 18213945 1 + T C STAD 18213959 + 18213939 18213979 41 ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG ACTTTTCTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG < 41bp 1 0.527046584265651 1 0.619614720344543 experiment 0.945906831468699 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213959 chr6:18213945 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_38075 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr9 78772059 78772059 1 + A G STAD 78772063 + 78772043 78772083 41 GCACGTGTGTGTGGAGAGCACAGACCGACAAATCAAGTAAT GCACGTGTGTGTGGAGGGCACAGACCGACAAATCAAGTAAT < 41bp 1 0.197528422704169 1 0.166651427745819 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCSK5 ENSG00000099139 CDS Human protein_coding chr9:78772063 chr9:78772059 nonsynonymous SNV 0.999 1 17 hm5C_associated_SNPs_38077 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:78772040-78772064
64251 chrX 205517 205517 1 + T C STAD 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCCGAA < 41bp 1 0.521484675371202 1 0.190605640411377 experiment 0.957030649257596 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205517 nonsynonymous SNV 0.015 1 38 hm5C_associated_SNPs_38078 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:205501-205539
64251 chrX 73046140 73046140 1 - A T STAD 73046124 - 73046104 73046144 41 TTTCTTTTGACCCCAGAAGCCCTAGACTGAGAAGATAAAAT TTTCATTTGACCCCAGAAGCCCTAGACTGAGAAGATAAAAT < 41bp 1 0.0175596473079011 1 0.171994477510452 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046124 chrX:73046140 . . 0 5 hm5C_associated_SNPs_38083 0 0 92 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046140 73046140 1 - A T STAD 73046131 - 73046111 73046151 41 TCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAAG TCAGTCCTTTCATTTGACCCCAGAAGCCCTAGACTGAGAAG < 41bp 1 0.224991083394564 1 0.449099689722061 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046131 chrX:73046140 . . 0 12 hm5C_associated_SNPs_38084 0 0 92 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046140 73046140 1 - A T STAD 73046132 - 73046112 73046152 41 TTCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAA TTCAGTCCTTTCATTTGACCCCAGAAGCCCTAGACTGAGAA < 41bp 1 0.124794366691235 1 0.389941304922104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046132 chrX:73046140 . . 0 13 hm5C_associated_SNPs_38085 0 0 92 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr19 49469092 49469092 1 + C G STAD 49469074 + 49469054 49469094 41 GCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCCGA GCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCGGA < 41bp 1 0.374120143926771 1 0.115731447935104 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FTL ENSG00000087086 CDS Human protein_coding chr19:49469074 chr19:49469092 synonymous SNV . 0 39 hm5C_associated_SNPs_38086 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:49469031-49469120
64251 chr3 136665004 136665004 1 + T C STAD 136664991 + 136664971 136665011 41 GTTTGGAACCATCACCTCCACAGTGTGATTACATTAGGCCT GTTTGGAACCATCACCTCCACAGTGTGATTACACTAGGCCT < 41bp 1 0.621869582460501 1 0.187120735645294 experiment 0.756260835078998 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664991 chr3:136665004 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_38087 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:136664997-136665026
64251 chr14 89075670 89075670 1 + A G STAD 89075656 + 89075636 89075676 41 GAAAAATGTTTGTTTGTTCACCCAAATTGTAAATATGATGC GAAAAATGTTTGTTTGTTCACCCAAATTGTAAATGTGATGC < 41bp 1 0.489661728084371 1 0.0597593486309052 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89075656 chr14:89075670 nonsynonymous SNV 0.992 4 35 hm5C_associated_SNPs_38091 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:89075614-89075752
64251 chr5 98115503 98115503 1 + G T STAD 98115483 + 98115463 98115503 41 CATTCTGCCGTGTTGGGTATCAGTGACCTCATGAGCCAGAG CATTCTGCCGTGTTGGGTATCAGTGACCTCATGAGCCAGAT < 41bp 1 0.539733022493516 1 0.743060350418091 experiment 0.920533955012967 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RGMB ENSG00000174136 CDS Human protein_coding chr5:98115483 chr5:98115503 nonsynonymous SNV 1.000 5 41 hm5C_associated_SNPs_38092 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:98115437-98115573
64251 chr13 114292018 114292018 1 + C T STAD 114292033 + 114292013 114292053 41 ATATCCGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGC ATATCTGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGC < 41bp 1 0.0785065746276663 1 0.0287375748157501 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292033 chr13:114292018 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_38093 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114291991-114292035
64251 chr13 114292018 114292018 1 + C T STAD 114292034 + 114292014 114292054 41 TATCCGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGCG TATCTGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGCG < 41bp 1 0.211575124693724 1 0.027423232793808 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292034 chr13:114292018 nonsynonymous SNV . 0 5 hm5C_associated_SNPs_38094 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114291991-114292035
64251 chr22 23438372 23438372 1 + G A STAD 23438366 + 23438346 23438386 41 ACTACCTGAACGACCTGGAGCGCATCGCCGCAGCTGACTAT ACTACCTGAACGACCTGGAGCGCATCACCGCAGCTGACTAT < 41bp 1 0.201701399382029 1 0.110622376203537 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438366 chr22:23438372 nonsynonymous SNV 0.418 1 27 hm5C_associated_SNPs_38096 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr8 104432678 104432678 1 + C T STAD 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGTGTGTGATGG < 41bp 1 0.113923942271503 1 0.0489752888679504 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432678 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_38098 0 0 5 EFTUD2 POSTAR2 ENCODE chr8:104432665-104432718
64251 chr12 19427792 19427792 1 + T C STAD 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CAGATCTTAGAGGTGGAAACCGCCCCAATACAGGGCCCTTA < 41bp 1 0.366866589021971 1 0.33037656545639 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427792 synonymous SNV . 0 20 hm5C_associated_SNPs_38100 0 0 1 BUD13 POSTAR2 ENCODE chr12:19427768-19427916
64251 chr5 112197085 112197085 1 + T A STAD 112197065 + 112197045 112197085 41 GCTCCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCT GCTCCTGGGTTGTTGAGACTCTTGTGAAGATGGCTTGCGCA < 41bp 1 0.637791122148351 1 0.204233020544052 experiment 0.724417755703299 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRP19 ENSG00000153037;ENSG00000272869 CDS Human other chr5:112197065 chr5:112197085 synonymous SNV . 0 41 hm5C_associated_SNPs_38101 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112197042-112197099
64251 chr2 27449471 27449471 1 + T C STAD 27449451 + 27449431 27449471 41 CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTT CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTC < 41bp 1 0.19025141094408 1 0.169943511486053 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27449451 chr2:27449471 nonsynonymous SNV 0.998 5 41 hm5C_associated_SNPs_38102 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:27449462-27449481
64251 chr7 129394914 129394914 1 + G T STAD 129394901 + 129394881 129394921 41 ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGG ATGTACCAGACTGTGGTGACCAGCCTCGCCCAGTGCAACGG < 41bp 1 0.610130549116886 1 0.24925684928894 experiment 0.779738901766227 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394901 chr7:129394914 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_38103 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr12 27908157 27908157 1 + A G STAD 27908142 + 27908122 27908162 41 AGAATGGGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGT AGAATGGGAAAAAAGTAAGACTGAAGCAGACATGGGAGAGT < 41bp 1 0.606331847562527 1 0.488257825374603 experiment 0.787336304874945 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908142 chr12:27908157 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_38104 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr12 27908157 27908157 1 + A G STAD 27908148 + 27908128 27908168 41 GGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGTATATAT GGAAAAAAGTAAGACTGAAGCAGACATGGGAGAGTATATAT < 41bp 1 0.493099839652107 1 0.749277651309967 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908148 chr12:27908157 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_38105 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr12 57627016 57627016 1 + G A STAD 57626998 + 57626978 57627018 41 CTACCGGAAAGGGGTGAAGGCTGTGGACCCCAAGACTGGCC CTACCGGAAAGGGGTGAAGGCTGTGGACCCCAAGACTGACC < 41bp 1 0.583523590569945 1 0.393198519945145 experiment 0.83295281886011 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57626998 chr12:57627016 nonsynonymous SNV 0.995 4 39 hm5C_associated_SNPs_38106 0 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:57626962-57627041
64251 chr12 57627016 57627016 1 + G A STAD 57627007 + 57626987 57627027 41 AGGGGTGAAGGCTGTGGACCCCAAGACTGGCCGGGAGATCC AGGGGTGAAGGCTGTGGACCCCAAGACTGACCGGGAGATCC < 41bp 1 0.331947729770479 1 0.559693038463593 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627007 chr12:57627016 nonsynonymous SNV 0.995 4 30 hm5C_associated_SNPs_38107 0 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:57626962-57627041
64251 chr19 1434847 1434847 1 + G A STAD 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGACGGCAGCGG < 41bp 1 0.29525283486208 1 0.173483580350876 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434847 nonsynonymous SNV 0.809 2 32 hm5C_associated_SNPs_38109 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434847 1434847 1 + G A STAD 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGACGGCAGCGGC < 41bp 1 0.407415226283012 1 0.108873754739761 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434847 nonsynonymous SNV 0.809 2 31 hm5C_associated_SNPs_38110 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434847 1434847 1 + G A STAD 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGGCCCCCCCGCCGACGGCAGCGGCT < 41bp 1 0.507358654345504 1 0.40028578042984 experiment 0.985282691308992 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434847 nonsynonymous SNV 0.809 2 30 hm5C_associated_SNPs_38111 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434847 1434847 1 + G A STAD 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGGCCCCCCCGCCGACGGCAGCGGCTT < 41bp 1 0.741575531264988 1 0.183891624212265 experiment 0.516848937470024 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434847 nonsynonymous SNV 0.809 2 29 hm5C_associated_SNPs_38112 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr10 35495861 35495861 1 + C T STAD 35495841 + 35495821 35495861 41 AGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTC AGCTGCCACTGGTGACATGCCAACTTACCAGATCCGAGCTT < 41bp 1 0.734598369292187 1 0.358431965112686 experiment 0.530803261415626 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CREM ENSG00000095794 CDS Human protein_coding chr10:35495841 chr10:35495861 nonsynonymous SNV 0.991 3 41 hm5C_associated_SNPs_38116 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:35495849-35495897
64251 chr3 127335911 127335911 1 + G A STAD 127335929 + 127335909 127335949 41 GGGCCCTGGTTCTGGCTGACCGAGGAGTGTGTCTCATTGAT GGACCCTGGTTCTGGCTGACCGAGGAGTGTGTCTCATTGAT < 41bp 1 0.709145642337718 1 0.769916772842407 experiment 0.581708715324565 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127335929 chr3:127335911 nonsynonymous SNV 0.964 4 3 hm5C_associated_SNPs_38118 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127335890-127335930
64251 chr22 38021904 38021904 1 + T G STAD 38021903 + 38021883 38021923 41 CCCTGGCGAGCAGGCCAGCCCTGAGCAGCCCAGTGCCTCAG CCCTGGCGAGCAGGCCAGCCCGGAGCAGCCCAGTGCCTCAG < 41bp 1 0.727046859253188 1 0.699412107467651 experiment 0.545906281493624 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021903 chr22:38021904 synonymous SNV . 0 22 hm5C_associated_SNPs_38119 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38021893-38021941
64251 chr5 139060718 139060718 1 + G T STAD 139060711 + 139060691 139060731 41 GCTGTGGCAGGTGCCGAAGCCCTCAATGGCCAGTCCGACTT GCTGTGGCAGGTGCCGAAGCCCTCAATTGCCAGTCCGACTT < 41bp 1 0.485419168190447 1 0.183424115180969 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CXXC5 ENSG00000171604 CDS Human protein_coding chr5:139060711 chr5:139060718 nonsynonymous SNV 0.996 4 28 hm5C_associated_SNPs_38121 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr5:139060715-139060741
64251 chr2 46607469 46607469 1 + C T STAD 46607459 + 46607439 46607479 41 GCCCCATCTGCCCCGAGGAGCGGCTCTTGGCGGAGAACCCA GCCCCATCTGCCCCGAGGAGCGGCTCTTGGTGGAGAACCCA < 41bp 1 0.373868869859071 1 0.335495114326477 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607459 chr2:46607469 nonsynonymous SNV 0.024 0 31 hm5C_associated_SNPs_38123 0 0 1 NOL12 POSTAR2 ENCODE chr2:46607401-46607469
64251 chr2 24964684 24964684 1 + G A STAD 24964700 + 24964680 24964720 41 CAACGTCAGCGGGAACTGTACAGTCAACAGCACCGACAGAG CAACATCAGCGGGAACTGTACAGTCAACAGCACCGACAGAG < 41bp 1 0.286134093665881 1 0.353557169437408 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964700 chr2:24964684 nonsynonymous SNV 0.996 1 5 hm5C_associated_SNPs_38124 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:24964681-24964718
64251 chr3 185324165 185324165 1 + G A STAD 185324153 + 185324133 185324173 41 AGAAGGCTGTAATAGAAGACCAGGTGGCCGTCGCCATAGCA AGAAGGCTGTAATAGAAGACCAGGTGGCCGTCACCATAGCA < 41bp 1 0.645320770073676 1 0.521380960941315 experiment 0.709358459852647 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SENP2 ENSG00000163904 CDS Human protein_coding chr3:185324153 chr3:185324165 nonsynonymous SNV 0.997 1 33 hm5C_associated_SNPs_38125 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:185324122-185324167
64251 chr7 22896252 22896252 1 + A T STAD 22896268 + 22896248 22896288 41 CTCTAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAA CTCTTATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAA < 41bp 1 0.0871802739300801 1 0.0590827465057373 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896268 chr7:22896252 . . 0 5 hm5C_associated_SNPs_38126 0 0 54 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:22896212-22896262
64251 chr7 22896252 22896252 1 + A T STAD 22896271 + 22896251 22896291 41 TAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAAGGA TTATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAAGGA < 41bp 1 0.456169343930754 1 0.144567549228668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896271 chr7:22896252 . . 0 2 hm5C_associated_SNPs_38127 0 0 54 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:22896212-22896262
64251 chr1 39851472 39851472 1 + G A STAD 39851491 + 39851471 39851511 41 CGAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTCTCAG CAAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTCTCAG < 41bp 1 0.15905088575945 1 0.344105362892151 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851491 chr1:39851472 nonsynonymous SNV 0.960 3 2 hm5C_associated_SNPs_38128 0 0 4 BUD13 POSTAR2 ENCODE chr1:39851425-39851479
64251 chr18 74620354 74620354 1 + G A STAD 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATAC < 41bp 1 0.46399761582666 1 0.193026214838028 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620354 nonsynonymous SNV 0.183 0 40 hm5C_associated_SNPs_38129 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:74620323-74620361
64251 chr7 892494 892494 1 + G A STAD 892492 + 892472 892512 41 CAATTTCTTTTCGTTCTTGCCCGTGTTGAACTGGGCAAGCA CAATTTCTTTTCGTTCTTGCCCATGTTGAACTGGGCAAGCA < 41bp 1 0.190253416044094 1 0.0531162619590759 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:892492 chr7:892494 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_38130 0 0 9 BUD13 POSTAR2 ENCODE chr7:892436-892497
64251 chr6 26156698 26156698 1 + C T STAD 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGTTTGCAGGTGCGGCCAAGCGCAAAGCGTCTG < 41bp 1 0.522617536778492 1 0.102795273065567 experiment 0.954764926443016 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156698 nonsynonymous SNV 0.760 1 12 hm5C_associated_SNPs_38131 0 0 44 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr2 70096881 70096881 1 + G A STAD 70096880 + 70096860 70096900 41 CGTTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC CGTTGGACAGGTTTTAACTTCAGCTTCGACCTACTTGTAAC < 41bp 1 0.528127628397042 1 0.14831730723381 experiment 0.943744743205916 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096880 chr2:70096881 nonsynonymous SNV 0.992 2 22 hm5C_associated_SNPs_38133 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr2:70096863-70096884
64251 chr11 68204455 68204455 1 + G A STAD 68204450 + 68204430 68204470 41 CCCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTG CCCCGACTGTATCGACGGCTCCGACAAGCTCATGTGTGGTG < 41bp 1 0.108792920319756 1 0.105674684047699 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204450 chr11:68204455 nonsynonymous SNV 0.875 4 26 hm5C_associated_SNPs_38136 1 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr11 68204455 68204455 1 + G A STAD 68204451 + 68204431 68204471 41 CCCGACTGTATCGACGGCTCCGACGAGCTCATGTGTGGTGA CCCGACTGTATCGACGGCTCCGACAAGCTCATGTGTGGTGA < 41bp 1 0.539620163757533 1 0.61544668674469 experiment 0.920759672484935 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204451 chr11:68204455 nonsynonymous SNV 0.875 4 25 hm5C_associated_SNPs_38137 1 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:68204438-68204463
64251 chr9 130551706 130551706 1 + A G STAD 130551725 + 130551705 130551745 41 CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC CGTGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC < 41bp 1 0.562086073222873 1 0.470437854528427 experiment 0.875827853554254 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130551725 chr9:130551706 nonsynonymous SNV 0.996 1 2 hm5C_associated_SNPs_38138 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130551672-130551713
64251 chr12 57919830 57919830 1 + G A STAD 57919812 + 57919792 57919832 41 TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTC TGCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCATC < 41bp 1 0.0632530167040852 1 0.0447620451450348 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919812 chr12:57919830 nonsynonymous SNV 0.979 0 39 hm5C_associated_SNPs_38140 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919830 57919830 1 + G A STAD 57919813 + 57919793 57919833 41 GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCC GCCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCATCC < 41bp 1 0.0808286570478731 1 0.0370832681655884 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919813 chr12:57919830 nonsynonymous SNV 0.979 0 38 hm5C_associated_SNPs_38141 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919830 57919830 1 + G A STAD 57919814 + 57919794 57919834 41 CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCC CCCAGGCACCCTCAGCTTCCCACTCCTCATCACTTCATCCC < 41bp 1 0.141636117248285 1 0.0387889742851257 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919814 chr12:57919830 nonsynonymous SNV 0.979 0 37 hm5C_associated_SNPs_38142 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr12 57919830 57919830 1 + G A STAD 57919816 + 57919796 57919836 41 CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCGTCCCTC CAGGCACCCTCAGCTTCCCACTCCTCATCACTTCATCCCTC < 41bp 1 0.273140415830248 1 0.622811913490295 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919816 chr12:57919830 nonsynonymous SNV 0.979 0 35 hm5C_associated_SNPs_38143 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57919828-57919852
64251 chr9 138395646 138395646 1 + G A STAD 138395653 + 138395633 138395673 41 TCTTTGGCCCCACGGTCCGCCTGCCGGACCTCATCATCTTC TCTTTGGCCCCACAGTCCGCCTGCCGGACCTCATCATCTTC < 41bp 1 0.382182673578004 1 0.0927354097366333 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395653 chr9:138395646 synonymous SNV . 0 14 hm5C_associated_SNPs_38144 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr20 47605105 47605105 1 + G T STAD 47605120 + 47605100 47605140 41 GAAGAGTATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA GAAGATTATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA < 41bp 1 0.205805250585215 1 0.117898851633072 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47605120 chr20:47605105 nonsynonymous SNV 0.961 1 6 hm5C_associated_SNPs_38145 0 0 1 BUD13 POSTAR2 ENCODE chr20:47605096-47605119
64251 chr19 10200705 10200705 1 + C T STAD 10200688 + 10200668 10200708 41 TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGCGTG TTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCGCCGTGTG < 41bp 1 0.579225095002988 1 0.336541652679443 experiment 0.841549809994024 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200688 chr19:10200705 nonsynonymous SNV 0.950 0 38 hm5C_associated_SNPs_38146 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr3 193336664 193336664 1 + C T STAD 193336676 + 193336656 193336696 41 AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCGTG AGGTTCTCTGGAAGAAACGGCGTTTAGAGCAACAGATCGTG < 41bp 1 0.0505443014235245 1 0.045075386762619 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336676 chr3:193336664 nonsynonymous SNV 0.941 0 9 hm5C_associated_SNPs_38147 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:193336641-193336669
64251 chr6 7578041 7578041 1 + C A STAD 7578027 + 7578007 7578047 41 TGCAGGATTATGAGCTCCAGCTGGCCTCATACACCTCAGGA TGCAGGATTATGAGCTCCAGCTGGCCTCATACACATCAGGA < 41bp 1 0.218473126181494 1 0.411549299955368 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DSP ENSG00000096696 CDS Human protein_coding chr6:7578027 chr6:7578041 synonymous SNV . 0 35 hm5C_associated_SNPs_38148 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:7578012-7578045
64251 chr3 183885455 183885455 1 + G A STAD 183885453 + 183885433 183885473 41 CCTGAATCAGGGTTGGAGGTCCGTGACCGCATGTGGCTCAA CCTGAATCAGGGTTGGAGGTCCATGACCGCATGTGGCTCAA < 41bp 1 0.176716392273865 1 0.395664870738983 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885453 chr3:183885455 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_38149 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:183885436-183885474
64251 chr16 31131804 31131804 1 + G A STAD 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCACAA < 41bp 1 0.269649952599056 1 0.0729206502437592 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131804 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_38150 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr16:31131799-31131812
64251 chr19 2271925 2271925 1 + G A STAD 2271919 + 2271899 2271939 41 GCAGCCTCTACATCGAGATCCCGGGCGGCGCGCTGCCCGAG GCAGCCTCTACATCGAGATCCCGGGCAGCGCGCTGCCCGAG < 41bp 1 0.694926408577948 1 0.875389039516449 experiment 0.610147182844104 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2271919 chr19:2271925 nonsynonymous SNV 0.062 3 27 hm5C_associated_SNPs_38151 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:2271823-2271942
64251 chr11 130011397 130011397 1 + T C STAD 130011408 + 130011388 130011428 41 TTCAGGTCATTGACGAGACTCTGGATGTTAAGGAAATGATT TTCAGGTCACTGACGAGACTCTGGATGTTAAGGAAATGATT < 41bp 1 0.791027155534142 1 0.775727033615112 experiment 0.417945688931717 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130011408 chr11:130011397 nonsynonymous SNV 0.954 2 10 hm5C_associated_SNPs_38152 0 0 18 SRSF1 POSTAR2 GSE83923,GSM2221667 chr11:130011380-130011400
64251 chr4 26407849 26407849 1 + C T STAD 26407834 + 26407814 26407854 41 ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTCTTCAT ATTTAAAAGAGCGAGGGGATCAAACAGTACTTATTTTTCAT < 41bp 1 0.272238900120393 1 0.235794544219971 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBPJ ENSG00000168214 CDS Human protein_coding chr4:26407834 chr4:26407849 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_38153 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:26407819-26407861
64251 chr8 1904965 1904965 1 + G A STAD 1904975 + 1904955 1904995 41 CAAATTCATCGTCCTGGCCACGGCTCTGCACGAGAAAGACA CAAATTCATCATCCTGGCCACGGCTCTGCACGAGAAAGACA < 41bp 1 0.178862130929348 1 0.0616053640842438 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1904975 chr8:1904965 nonsynonymous SNV 0.001 1 11 hm5C_associated_SNPs_38156 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:1904963-1904982
64251 chr18 2667021 2667021 1 + A C STAD 2667024 + 2667004 2667044 41 ATGCCAGTGAAGGACAAAATCCTTTGCGTAAGTATCCCATT ATGCCAGTGAAGGACAACATCCTTTGCGTAAGTATCCCATT < 41bp 1 0.0365994015254653 1 0.0569356977939606 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2667024 chr18:2667021 nonsynonymous SNV 0.997 4 18 hm5C_associated_SNPs_38158 1 0 4 DDX24 POSTAR2 ENCODE chr18:2666872-2667024
64251 chr3 25542770 25542770 1 + A C STAD 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGCCAATCCTGTCGACTCCAGAAGTGCTT < 41bp 1 0.255770313499094 1 0.105762988328934 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542770 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_38159 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:25542765-25542798
64251 chr1 214813974 214813974 1 + G A STAD 214813977 + 214813957 214813997 41 AATATGAGAGCCTCAGGGATCTGCTAAAATCCAAAGATGCT AATATGAGAGCCTCAGGAATCTGCTAAAATCCAAAGATGCT < 41bp 1 0.33332575120499 1 0.560350835323334 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214813977 chr1:214813974 nonsynonymous SNV 0.989 1 18 hm5C_associated_SNPs_38160 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214813798-214814045
64251 chr12 124074954 124074954 1 + G A STAD 124074965 + 124074945 124074985 41 GTAAAGCACGAACAGGAATACATGGAAGTCCGGGAGAGAAT GTAAAGCACAAACAGGAATACATGGAAGTCCGGGAGAGAAT < 41bp 1 0.575940662087802 1 0.170207172632217 experiment 0.848118675824395 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED2 ENSG00000086598 CDS Human protein_coding chr12:124074965 chr12:124074954 nonsynonymous SNV 0.997 2 10 hm5C_associated_SNPs_38161 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:124074899-124074965
64251 chr7 98601919 98601919 1 + C T STAD 98601905 + 98601885 98601925 41 TCTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC TCTTGGAGGCCAAGACCAAGCAACTCCCCAAATTTTTCCTC < 41bp 1 0.137210321758344 1 0.632133722305298 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98601905 chr7:98601919 synonymous SNV . 0 35 hm5C_associated_SNPs_38162 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98601876-98601929
64251 chr11 110333089 110333089 1 + G A STAD 110333093 + 110333073 110333113 41 TACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATC TACAGATCACGGTTGGACTGCCAAATCTGTTTGACAAAATC < 41bp 1 0.202680478733365 1 0.170680284500122 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333093 chr11:110333089 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_38163 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr11 110333089 110333089 1 + G A STAD 110333094 + 110333074 110333114 41 ACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATCT ACAGATCACGGTTGGACTGCCAAATCTGTTTGACAAAATCT < 41bp 1 0.215545733253297 1 0.379631042480469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333094 chr11:110333089 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_38164 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr2 70096947 70096947 1 + C T STAD 70096964 + 70096944 70096984 41 CAGCCATGTAGCGGATCTGTCAGTTTACAGCCTCGAAGGAG CAGTCATGTAGCGGATCTGTCAGTTTACAGCCTCGAAGGAG < 41bp 1 0.409984393323799 1 0.190473675727844 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096964 chr2:70096947 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_38166 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70096897-70096980
64251 chr15 41554990 41554990 1 + T G STAD 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTGGATTCATGCGAACGTTGGCTCATTTCCGC < 41bp 1 0.301681333199461 1 0.383933186531067 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41554990 synonymous SNV . 0 26 hm5C_associated_SNPs_38172 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:41554981-41554998
64251 chr2 32640623 32640623 1 + A C STAD 32640607 + 32640587 32640627 41 TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGAATCC TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGCATCC < 41bp 1 0.129753364345733 1 0.480614811182022 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640607 chr2:32640623 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_38173 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:32640600-32640640
64251 chr20 32660006 32660006 1 + C T STAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCAGATGTGGAGACCATCTTTTCTAAGTATGGCCGTGT < 41bp 1 0.0738579150075995 1 0.0572622716426849 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32660006 synonymous SNV . 0 24 hm5C_associated_SNPs_38174 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chr21 30422460 30422460 1 + A C STAD 30422456 + 30422436 30422476 41 TAACAAACACATAAAGTTTCCGGAAATCTTAGATTTGGCTC TAACAAACACATAAAGTTTCCGGACATCTTAGATTTGGCTC < 41bp 1 0.407988954614947 1 0.472364336252213 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30422456 chr21:30422460 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_38175 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:30422433-30422461
64251 chr3 183854515 183854515 1 + A C STAD 183854500 + 183854480 183854520 41 TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGAACATT TGTCTTTTGTTGCTGGAAAGCTGCTCAAATCAAAGCACATT < 41bp 1 0.393134203646239 1 0.339789092540741 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183854500 chr3:183854515 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_38179 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:183854482-183854517
64251 chr1 214794191 214794191 1 + G A STAD 214794185 + 214794165 214794205 41 TGGGGAACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAA TGGGGAACAAGAGGTGACTCCAAGTCAATCAACTTTGCAAA < 41bp 1 0.315306458924209 1 0.144644975662231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794185 chr1:214794191 nonsynonymous SNV 0.001 1 27 hm5C_associated_SNPs_38180 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr1 214794191 214794191 1 + G A STAD 214794190 + 214794170 214794210 41 AACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAATAGGG AACAAGAGGTGACTCCAAGTCAATCAACTTTGCAAATAGGG < 41bp 1 0.0715058426142679 1 0.218247324228287 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794190 chr1:214794191 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_38181 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr17 66251928 66251928 1 + G T STAD 66251944 + 66251924 66251964 41 GGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCT GGAATAAGCTGACCGGCGCCCTCTAAACCTTTGCCCTATCT < 41bp 1 0.629928458053915 1 0.808209657669067 experiment 0.74014308389217 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control AMZ2 ENSG00000196704 CDS Human protein_coding chr17:66251944 chr17:66251928 stopgain 0.997 1 5 hm5C_associated_SNPs_38182 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr17:66251906-66251934
64251 chr9 133738166 133738166 1 + A G STAD 133738171 + 133738151 133738191 41 TCTACGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG TCTACGTCTCCTCCGGGAGCCGCTTCAACACCCTGGCCGAG < 41bp 1 0.124391585337043 1 0.197139710187912 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738171 chr9:133738166 nonsynonymous SNV 0.997 3 16 hm5C_associated_SNPs_38183 0 0 3 PRPF8 POSTAR2 ENCODE chr9:133738123-133738177
64251 chr11 94554964 94554964 1 + G A STAD 94554949 + 94554929 94554969 41 ACCGGGTGCTTCACCAGGAACTTCAGGGTTACTACGACAAT ACCGGGTGCTTCACCAGGAACTTCAGGGTTACTACAACAAT < 41bp 1 0.317321025121331 1 0.139560341835022 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94554949 chr11:94554964 nonsynonymous SNV 0.996 1 36 hm5C_associated_SNPs_38184 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:94554964-94554987
64251 chr5 179195995 179195995 1 + T C STAD 179195992 + 179195972 179196012 41 CCGCTGTAATGAAGCAGCATCAGTTGCTTTTGGACCAACAG CCGCTGTAATGAAGCAGCATCAGCTGCTTTTGGACCAACAG < 41bp 1 0.176041088171902 1 0.67532342672348 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAML1 ENSG00000161021 CDS Human protein_coding chr5:179195992 chr5:179195995 synonymous SNV . 0 24 hm5C_associated_SNPs_38186 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:179195980-179196000
64251 chr7 98591318 98591318 1 + C T STAD 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCATTGTCGATCAGATGGTCTGGTTCAGAGAA < 41bp 1 0.276876101426539 1 0.348194301128387 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591318 synonymous SNV . 0 14 hm5C_associated_SNPs_38187 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr7:98591300-98591320
64251 chr7 70252212 70252212 1 + G A STAD 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCAGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA < 41bp 1 0.140760061247058 1 0.0729379951953888 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252212 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_38188 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr16 53504328 53504328 1 + T G STAD 53504331 + 53504311 53504351 41 TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG TGGAGGGATAACATTCTGCCCTGTCCAAGTCAATGTTGGGG < 41bp 1 0.0733025844758525 1 0.0846821069717407 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504331 chr16:53504328 nonsynonymous SNV 0.995 4 18 hm5C_associated_SNPs_38193 0 0 6 DDX24 POSTAR2 ENCODE chr16:53504281-53504363
64251 chr11 65826323 65826323 1 + G A STAD 65826306 + 65826286 65826326 41 TCCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAACCGAAA TCCTCCTCTTGACAGAAAAACCGGAAGCGTAGGAACCAAAA < 41bp 1 0.609241926839444 1 0.460388630628586 experiment 0.781516146321112 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826306 chr11:65826323 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_38196 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:65826320-65826340
64251 chr21 38853084 38853084 1 + C T STAD 38853089 + 38853069 38853109 41 GAAAAGTGGATGGATCGTTACGAAATTGACTCCTTGATAGG GAAAAGTGGATGGATTGTTACGAAATTGACTCCTTGATAGG < 41bp 1 0.652624730599466 1 0.835838794708252 experiment 0.694750538801068 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38853089 chr21:38853084 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_38197 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:38852989-38853112
64251 chr15 89849327 89849327 1 + G A STAD 89849336 + 89849316 89849356 41 CATTTTTCCACGAGCTGGTGCAGACAGCTCTGCCATCAGGC CATTTTTCCACAAGCTGGTGCAGACAGCTCTGCCATCAGGC < 41bp 1 0.0891829123904439 1 0.431749820709229 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FANCI ENSG00000140525 CDS Human protein_coding chr15:89849336 chr15:89849327 nonsynonymous SNV 0.975 5 12 hm5C_associated_SNPs_38198 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:89849290-89849330
64251 chr10 17277206 17277206 1 + G T STAD 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGATAACTTT < 41bp 1 0.634968162243528 1 0.370715618133545 experiment 0.730063675512945 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277206 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_38199 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr18 8638257 8638257 1 + T C STAD 8638254 + 8638234 8638274 41 CCAAGACCACATGTCCGATGCTGTTGATTTCCTACTTTGGA CCAAGACCACATGTCCGATGCTGCTGATTTCCTACTTTGGA < 41bp 1 0.375504194307657 1 0.10660383105278 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB12 ENSG00000206418 CDS Human protein_coding chr18:8638254 chr18:8638257 synonymous SNV . 0 24 hm5C_associated_SNPs_38200 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:8638240-8638260
64251 chr11 86947710 86947710 1 + T C STAD 86947706 + 86947686 86947726 41 TTGTTTTGCATCACAGCTGCCATGTACATGTTCTTTTTCAG TTGTTTTGCATCACAGCTGCCATGCACATGTTCTTTTTCAG < 41bp 1 0.0363521855726596 1 0.0440269410610199 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86947706 chr11:86947710 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_38201 0 0 4 PPIG POSTAR2 ENCODE chr11:86947688-86947716
64251 chr6 109763764 109763764 1 + C T STAD 109763767 + 109763747 109763787 41 TCCATGCCGAATACAATCGACAGAAGGACATCTACCTAGCA TCCATGCCGAATACAATTGACAGAAGGACATCTACCTAGCA < 41bp 1 0.624984966883234 1 0.408196300268173 experiment 0.750030066233532 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109763767 chr6:109763764 stopgain 0.332 1 18 hm5C_associated_SNPs_38204 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr6:109763757-109763795
64251 chr17 38320029 38320029 1 + G T STAD 38320033 + 38320013 38320053 41 GCAGACTTCTGTGAGGGATCCATCTCCAGAAGCAGATGCTC GCAGACTTCTGTGAGGTATCCATCTCCAGAAGCAGATGCTC < 41bp 1 0.211344927257491 1 0.026223361492157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320033 chr17:38320029 nonsynonymous SNV 0.999 2 17 hm5C_associated_SNPs_38205 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38319966-38320032
64251 chr6 26204985 26204985 1 + T A STAD 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATTACCAAGCCTGCCATCCGGCGCCATGCTCGTCGCGG < 41bp 1 0.61508789182542 1 0.920441269874573 experiment 0.76982421634916 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204985 nonsynonymous SNV 0.044 0 29 hm5C_associated_SNPs_38206 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr11 61898025 61898025 1 + G C STAD 61898007 + 61897987 61898027 41 AGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAAGAC AGTGTTGTCCGCAGGGCGAGCAGAAGGCTTGCCAAGAACAC < 41bp 1 0.658306751568013 1 0.709370315074921 experiment 0.683386496863974 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61898007 chr11:61898025 nonsynonymous SNV 0.404 2 39 hm5C_associated_SNPs_38207 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61898009-61898035
64251 chr11 61898025 61898025 1 + G C STAD 61898018 + 61897998 61898038 41 CAGGGCGAGCAGAAGGCTTGCCAAGAAGACTGCCGAAGAGC CAGGGCGAGCAGAAGGCTTGCCAAGAACACTGCCGAAGAGC < 41bp 1 0.158065249453241 1 0.163791745901108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61898018 chr11:61898025 nonsynonymous SNV 0.404 2 28 hm5C_associated_SNPs_38208 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61898009-61898035
64251 chr17 78350178 78350178 1 + G A STAD 78350171 + 78350151 78350191 41 TCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATT TCCTGATATCAGCCGTTTTGCAACATCACTCGTGGACAATT < 41bp 1 0.18137390220674 1 0.15517857670784 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78350171 chr17:78350178 synonymous SNV . 0 28 hm5C_associated_SNPs_38209 0 0 5 DDX24 POSTAR2 ENCODE chr17:78350164-78350230
64251 chr14 103802217 103802217 1 + G T STAD 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCTCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG < 41bp 1 0.160832955378041 1 0.0617451369762421 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802217 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_38210 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr8 145535505 145535505 1 + C T STAD 145535495 + 145535475 145535515 41 GGCTCCTGCCAGCCCCATGGCCTCCCCCGGCGGGAGCATAG GGCTCCTGCCAGCCCCATGGCCTCCCCCGGTGGGAGCATAG < 41bp 1 0.0279241463439867 1 0.0934485793113708 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535495 chr8:145535505 synonymous SNV . 0 31 hm5C_associated_SNPs_38211 0 0 5 IGF2BP2 POSTAR2 ENCODE chr8:145535466-145535520
64251 chr5 112164562 112164562 1 + A G STAD 112164560 + 112164540 112164580 41 GATTAATTTGCAGGTTATTGCGAGTGTTTTGAGGAATTTGT GATTAATTTGCAGGTTATTGCGGGTGTTTTGAGGAATTTGT < 41bp 1 0.253589540685559 1 0.480774372816086 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APC ENSG00000134982;ENSG00000258864 CDS Human other chr5:112164560 chr5:112164562 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_38212 0 0 1 PUM2 POSTAR2 ENCODE chr5:112164554-112164642
64251 chr19 11032425 11032425 1 + G A STAD 11032439 + 11032419 11032459 41 CACTACGGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC CACTACAGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC < 41bp 1 0.361034277342656 1 0.258675217628479 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CARM1 ENSG00000142453 CDS Human protein_coding chr19:11032439 chr19:11032425 nonsynonymous SNV 0.994 2 7 hm5C_associated_SNPs_38214 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11032418-11032439
64251 chrX 47774350 47774350 1 + A G STAD 47774348 + 47774328 47774368 41 AAATTTGGAATTAAGCCTTCCCAGAGGAGAATTTCTGGGAA AAATTTGGAATTAAGCCTTCCCGGAGGAGAATTTCTGGGAA < 41bp 1 0.349687806257878 1 0.591449856758118 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47774348 chrX:47774350 nonsynonymous SNV 0.525 0 23 hm5C_associated_SNPs_38217 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:47774329-47774353
64251 chr14 103802238 103802238 1 + A G STAD 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACCGCAGCGTGTCAGACCAGTTCTGTCGCTACAAGATG < 41bp 1 0.209003480637926 1 0.0598872303962708 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802238 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_38218 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr7 138944059 138944059 1 + G A STAD 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGATGAAGAAGCGGAAGCAGAAAGAGGAAGGGGAAAAG < 41bp 1 0.458810283241104 1 0.396406710147858 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944059 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_38219 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr11 44626950 44626950 1 + G A STAD 44626956 + 44626936 44626976 41 CCCAGGTGACGGCCGGGGCCCTCTTCTACTTCAACATGGGC CCCAGGTGACGGCCAGGGCCCTCTTCTACTTCAACATGGGC < 41bp 1 0.0977942301550112 1 0.0273120403289795 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44626956 chr11:44626950 nonsynonymous SNV 0.004 5 15 hm5C_associated_SNPs_38220 0 0 1 SND1 POSTAR2 ENCODE chr11:44626904-44626976
64251 chr5 110439999 110439999 1 + T G STAD 110439992 + 110439972 110440012 41 ACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAG ACTCTACAGCAATTGCCGGACTGACATGTCTCCATAGAGAG < 41bp 1 0.325191192523085 1 0.0948715209960938 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR36 ENSG00000134987 CDS Human protein_coding chr5:110439992 chr5:110439999 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_38223 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:110439965-110440005
64251 chrX 21995195 21995195 1 + C T STAD 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCCATAGTGTGAGGAGGAGCCATCGACAGATACTGGCCCA < 41bp 1 0.162886213739375 1 0.214223593473434 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995195 stopgain 0.997 1 11 hm5C_associated_SNPs_38228 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:21995180-21995200
64251 chr3 49212180 49212180 1 + C T STAD 49212179 + 49212159 49212199 41 CCAATTCCATTGACAGGGGGCCGCCAGGGCAAGCTCCCGGT CCAATTCCATTGACAGGGGGCTGCCAGGGCAAGCTCCCGGT < 41bp 1 0.179813886477598 1 0.120189249515533 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212179 chr3:49212180 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_38230 0 0 1 FMR1 POSTAR2 ENCODE chr3:49212175-49212204
64251 chr16 28884771 28884771 1 + C T STAD 28884777 + 28884757 28884797 41 TTCCTATCCAGAACCGACCACCTCCCATGACCCACCCCAGC TTCCTATCCAGAACTGACCACCTCCCATGACCCACCCCAGC < 41bp 1 0.0202277409846206 1 0.261127561330795 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884777 chr16:28884771 nonsynonymous SNV 0.982 0 15 hm5C_associated_SNPs_38231 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr16:28884741-28884773
64251 chrX 73046663 73046663 1 - G A STAD 73046662 - 73046642 73046682 41 CCAACGACCTAAGATTAGCCCAGGGTTGTAGCTGGAAGACC CCAACGACCTAAGATTAGCTCAGGGTTGTAGCTGGAAGACC < 41bp 1 0.642757531719362 1 0.636115729808807 experiment 0.714484936561276 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046662 chrX:73046663 . . 0 20 hm5C_associated_SNPs_38232 0 0 82 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046663 73046663 1 - G A STAD 73046674 - 73046654 73046694 41 TGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGGTTGT TGTGACACAAGGCCAACGACCTAAGATTAGCTCAGGGTTGT < 41bp 1 0.277864415293834 1 0.30571836233139 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046674 chrX:73046663 . . 0 32 hm5C_associated_SNPs_38233 0 0 82 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046663 73046663 1 - G A STAD 73046678 - 73046658 73046698 41 GACTTGTGACACAAGGCCAACGACCTAAGATTAGCCCAGGG GACTTGTGACACAAGGCCAACGACCTAAGATTAGCTCAGGG < 41bp 1 0.126198976078271 1 0.424855291843414 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046678 chrX:73046663 . . 0 36 hm5C_associated_SNPs_38234 0 0 82 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr11 8706388 8706388 1 + T C STAD 8706393 + 8706373 8706413 41 ACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTG ACAGACACGGGTGAACGCTGCTAAAAACAAGACTGGGGCTG < 41bp 1 0.645856667279139 1 0.700012683868408 experiment 0.708286665441722 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL27A ENSG00000166441 CDS Human protein_coding chr11:8706393 chr11:8706388 synonymous SNV . 0 16 hm5C_associated_SNPs_38238 0 0 4 SUB1 POSTAR2 ENCODE chr11:8706358-8706441
64251 chr17 65722733 65722733 1 + A G STAD 65722746 + 65722726 65722766 41 ACGTCGCAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT ACGTCGCGGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT < 41bp 1 0.459907064244562 1 0.40200537443161 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722746 chr17:65722733 synonymous SNV . 0 8 hm5C_associated_SNPs_38239 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65722634-65722747
64251 chr2 69379378 69379378 1 + G A STAD 69379375 + 69379355 69379395 41 CTGGCTCTCCTCTGGTGGTTCTGGCCCCTCTGCTGCACTGT CTGGCTCTCCTCTGGTGGTTCTGACCCCTCTGCTGCACTGT < 41bp 1 0.210605567973881 1 0.435444444417953 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANTXR1 ENSG00000169604 CDS Human protein_coding chr2:69379375 chr2:69379378 stopgain 0.997 1 24 hm5C_associated_SNPs_38240 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:69379352-69379394
64251 chr11 490498 490498 1 + C T STAD 490505 + 490485 490525 41 GCACCGTCGGCAACGGGGACCAGCACCCACTGGGGCTGGAC GCACCGTCGGCAATGGGGACCAGCACCCACTGGGGCTGGAC < 41bp 1 0.551129405517927 1 0.693546831607819 experiment 0.897741188964146 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTDSS2 ENSG00000174915 CDS Human protein_coding chr11:490505 chr11:490498 synonymous SNV . 0 14 hm5C_associated_SNPs_38242 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:490494-490526
64251 chr19 12902862 12902862 1 + C A STAD 12902850 + 12902830 12902870 41 TCGCCTCTTCGGAGCTGGAACGCCTGATTGTCCCCAACAGC TCGCCTCTTCGGAGCTGGAACGCCTGATTGTCACCAACAGC < 41bp 1 0.402406431446862 1 0.141667425632477 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12902850 chr19:12902862 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_38244 0 0 1 RBM15 POSTAR2 ENCODE chr19:12902841-12902889
64251 chr12 53700875 53700875 1 + C T STAD 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGTCTTG < 41bp 1 0.515793187917153 1 0.396431982517242 experiment 0.968413624165693 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700875 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_38245 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:53700868-53700909
64251 chr8 144332286 144332286 1 + G A STAD 144332280 + 144332260 144332300 41 AGGAAGAAACCCTATGAGTGCAGTGAGTGTGGGCGGATCTT AGGAAGAAACCCTATGAGTGCAGTGAATGTGGGCGGATCTT < 41bp 1 0.223880391031425 1 0.337524890899658 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZFP41 ENSG00000181638;ENSG00000264668 CDS Human other chr8:144332280 chr8:144332286 synonymous SNV . 0 27 hm5C_associated_SNPs_38247 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:144332257-144332293
64251 chr10 31812911 31812911 1 + G C STAD 31812931 + 31812911 31812951 41 GAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGA CAATGACTCTGATTCTACACCGCCCAAAAAGAAAATGCGGA < 41bp 1 0.226395630710021 1 0.261093884706497 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31812931 chr10:31812911 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_38248 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:31812892-31812920
64251 chr5 112868662 112868662 1 + C T STAD 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA TGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA < 41bp 1 0.546470508142566 1 0.136386334896088 experiment 0.907058983714868 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868662 synonymous SNV . 0 1 hm5C_associated_SNPs_38249 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr19 38573359 38573359 1 + C T STAD 38573353 + 38573333 38573373 41 CGCCGCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCC CGCCGCCTCGGCCATGGCCTCCCTCATGGCCTCGCGGGCCC < 41bp 1 0.105971856221114 1 0.148748844861984 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573353 chr19:38573359 nonsynonymous SNV 0.006 1 27 hm5C_associated_SNPs_38251 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr9 134026004 134026004 1 + T G STAD 134026009 + 134025989 134026029 41 TGTGGCTTCTACAGATTGCACACTTTCAGAAGGAGTTGGAA TGTGGCTTCTACAGAGTGCACACTTTCAGAAGGAGTTGGAA < 41bp 1 0.093445736122898 1 0.0390708744525909 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134026009 chr9:134026004 nonsynonymous SNV 0.993 4 16 hm5C_associated_SNPs_38253 0 0 10 AARS POSTAR2 ENCODE chr9:134026001-134026063
64251 chr19 6374319 6374319 1 + C T STAD 6374323 + 6374303 6374343 41 CCCCGGCCAGACCCTGCTCTCCTCCGTGCACGTGCTGGACC CCCCGGCCAGACCCTGTTCTCCTCCGTGCACGTGCTGGACC < 41bp 1 0.253686518145088 1 0.112341076135635 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALKBH7 ENSG00000125652 CDS Human protein_coding chr19:6374323 chr19:6374319 nonsynonymous SNV 0.073 4 17 hm5C_associated_SNPs_38254 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6374316-6374346
64251 chr1 45973942 45973942 1 + G A STAD 45973929 + 45973909 45973949 41 TCATTGCTGACTACGAGGTGCACCCCAACCGACGCCCCAAG TCATTGCTGACTACGAGGTGCACCCCAACCGACACCCCAAG < 41bp 1 0.202773185743365 1 0.0484766662120819 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MMACHC ENSG00000132763 CDS Human protein_coding chr1:45973929 chr1:45973942 nonsynonymous SNV 0.978 4 34 hm5C_associated_SNPs_38255 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:45973933-45973973
64251 chr1 109643110 109643110 1 + C T STAD 109643093 + 109643073 109643113 41 GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCT GGGGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCATGCT < 41bp 1 0.135270555540711 1 0.034042626619339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643093 chr1:109643110 . . 0 38 hm5C_associated_SNPs_38256 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643106-109643131
64251 chr1 109643110 109643110 1 + C T STAD 109643095 + 109643075 109643115 41 GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCACGCTGT GGCGCTGTGCAGCGAGGCCCCTTAGGCGGCGGCCATGCTGT < 41bp 1 0.657000784358486 1 0.198974132537842 experiment 0.685998431283027 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643095 chr1:109643110 . . 0 36 hm5C_associated_SNPs_38257 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643106-109643131
64251 chr1 109643110 109643110 1 + C T STAD 109643104 + 109643084 109643124 41 CAGCGAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGA CAGCGAGGCCCCTTAGGCGGCGGCCATGCTGTGGTCCCCGA < 41bp 1 0.751661694106311 1 0.602910876274109 experiment 0.496676611787379 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643104 chr1:109643110 . . 0 27 hm5C_associated_SNPs_38258 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643106-109643131
64251 chr1 109643110 109643110 1 + C T STAD 109643108 + 109643088 109643128 41 GAGGCCCCTTAGGCGGCGGCCACGCTGTGGTCCCCGAGGTC GAGGCCCCTTAGGCGGCGGCCATGCTGTGGTCCCCGAGGTC < 41bp 1 0.438632979644163 1 0.39786097407341 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643108 chr1:109643110 . . 0 23 hm5C_associated_SNPs_38259 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643106-109643131
64251 chr1 109643110 109643110 1 + C T STAD 109643120 + 109643100 109643140 41 GCGGCGGCCACGCTGTGGTCCCCGAGGTCCCGGAGCTGGCC GCGGCGGCCATGCTGTGGTCCCCGAGGTCCCGGAGCTGGCC < 41bp 1 0.716892774299093 1 0.41826120018959 experiment 0.566214451401813 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643120 chr1:109643110 . . 0 11 hm5C_associated_SNPs_38260 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109643106-109643131
64251 chr22 35661161 35661161 1 + A G STAD 35661146 + 35661126 35661166 41 CGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCC CGGAAAAAGCACAAGTCATCCTCAGACGCACATTCGTCTCC < 41bp 1 0.795353313158698 1 0.478037029504776 experiment 0.409293373682605 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661146 chr22:35661161 synonymous SNV . 0 36 hm5C_associated_SNPs_38263 0 0 23 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:35661134-35661182
64251 chr20 62587751 62587751 1 - C A STAD 62587762 - 62587742 62587782 41 CTCCCGGCGGCCCATGCGCGCCGCCCGGCCAGGCCCGCAAA CTCCCGGCGGCCCATGCGCGCCGCCCGGCCATGCCCGCAAA < 41bp 1 0.453281496466991 1 0.172742515802383 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UCKL1-AS1 ENSG00000198276 UTR5 Human protein_coding chr20:62587762 chr20:62587751 . . 0 32 hm5C_associated_SNPs_38264 0 0 2 DDX3X POSTAR2 ENCODE chr20:62587612-62587751
64251 chr10 17277192 17277192 1 + C T STAD 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGTGTGA < 41bp 1 0.116698719459131 1 0.090015172958374 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277192 nonsynonymous SNV 1.000 5 37 hm5C_associated_SNPs_38265 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277192 17277192 1 + C T STAD 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCCCTGGAACGCCAGATGTGTGAAATGGAAGA < 41bp 1 0.399953513885809 1 0.528451383113861 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277192 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_38266 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chrX 107909801 107909801 1 + C A STAD 107909782 + 107909762 107909802 41 GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACCA GCGAAAAAGGCAAACCCGGTCAAGATGGTATTCCTGGACAA < 41bp 1 0.764459958012196 1 0.759025573730469 experiment 0.471080083975607 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107909782 chrX:107909801 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_38267 0 0 1 BUD13 POSTAR2 ENCODE chrX:107909799-107909820
64251 chr17 80426665 80426665 1 + T C STAD 80426677 + 80426657 80426697 41 GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC GCACAAAGCGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC < 41bp 1 0.536277351702677 1 0.462855875492096 experiment 0.927445296594646 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NARF ENSG00000141562 CDS Human protein_coding chr17:80426677 chr17:80426665 nonsynonymous SNV 0.998 1 9 hm5C_associated_SNPs_38268 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80426641-80426696
64251 chr20 47895512 47895512 1 + C G STAD 47895499 + 47895479 47895519 41 TGGTGTAAATGATGACTTCACTTTTTTCCCCATCAGATCGA TGGTGTAAATGATGACTTCACTTTTTTCCCCATGAGATCGA < 41bp 1 0.0982735879924065 1 0.0568522810935974 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895499 chr20:47895512 . . 0 34 hm5C_associated_SNPs_38270 0 0 82 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr20 47895512 47895512 1 + C G STAD 47895509 + 47895489 47895529 41 GATGACTTCACTTTTTTCCCCATCAGATCGACAATGCTGAC GATGACTTCACTTTTTTCCCCATGAGATCGACAATGCTGAC < 41bp 1 0.453700772274452 1 0.111881285905838 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895509 chr20:47895512 . . 0 24 hm5C_associated_SNPs_38271 0 0 82 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr20 47895512 47895512 1 + C G STAD 47895529 + 47895509 47895549 41 CATCAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTA CATGAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTA < 41bp 1 0.205875755006029 1 0.0751363933086395 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895529 chr20:47895512 . . 0 4 hm5C_associated_SNPs_38272 0 0 82 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr20 47895512 47895512 1 + C G STAD 47895532 + 47895512 47895552 41 CAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTAGTT GAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTAGTT < 41bp 1 0.0482165095774464 1 0.0699374675750732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895532 chr20:47895512 . . 0 1 hm5C_associated_SNPs_38273 0 0 82 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr3 193335014 193335014 1 + G C STAD 193335015 + 193334995 193335035 41 AGAAGACCTTGTAAAGTTAGCACCAGACTTTGACAAGATTG AGAAGACCTTGTAAAGTTACCACCAGACTTTGACAAGATTG < 41bp 1 0.693688286725504 1 0.17754191160202 experiment 0.612623426548991 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193335015 chr3:193335014 nonsynonymous SNV 0.927 0 20 hm5C_associated_SNPs_38274 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:193334994-193335030
64251 chr7 91622286 91622286 1 + G A STAD 91622287 + 91622267 91622307 41 GATGATGGAAAGTGAGTTGGCTGGGAAGCAGCATGAGATTG GATGATGGAAAGTGAGTTGACTGGGAAGCAGCATGAGATTG < 41bp 1 0.770421105230081 1 0.213450163602829 experiment 0.459157789539838 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622287 chr7:91622286 nonsynonymous SNV 0.950 0 20 hm5C_associated_SNPs_38279 0 0 9 DDX3X POSTAR2 GSE59096,GSM1427359 chr7:91622280-91622300
64251 chr7 91622286 91622286 1 + G A STAD 91622295 + 91622275 91622315 41 AAAGTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCTA AAAGTGAGTTGACTGGGAAGCAGCATGAGATTGAAGAGCTA < 41bp 1 0.636261705118929 1 0.738859534263611 experiment 0.727476589762143 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622295 chr7:91622286 nonsynonymous SNV 0.950 0 12 hm5C_associated_SNPs_38280 0 0 9 DDX3X POSTAR2 GSE59096,GSM1427359 chr7:91622280-91622300
64251 chr7 91622286 91622286 1 + G A STAD 91622298 + 91622278 91622318 41 GTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCTAAAC GTGAGTTGACTGGGAAGCAGCATGAGATTGAAGAGCTAAAC < 41bp 1 0.455352401692705 1 0.457144975662231 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91622298 chr7:91622286 nonsynonymous SNV 0.950 0 9 hm5C_associated_SNPs_38281 0 0 9 DDX3X POSTAR2 GSE59096,GSM1427359 chr7:91622280-91622300
64251 chr11 103075616 103075616 1 + T C STAD 103075629 + 103075609 103075649 41 GATAAACTGTGAGAGTAATCCAGCTTTGCATAAGAAATGCC GATAAACCGTGAGAGTAATCCAGCTTTGCATAAGAAATGCC < 41bp 1 0.13407896928082 1 0.421594023704529 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC2H1 ENSG00000187240 CDS Human protein_coding chr11:103075629 chr11:103075616 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_38282 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:103075609-103075631
64251 chr1 109801344 109801344 1 + C T STAD 109801328 + 109801308 109801348 41 CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCCCTC CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGTCCTC < 41bp 1 0.29691951909734 1 0.849355697631836 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801328 chr1:109801344 nonsynonymous SNV 0.014 0 37 hm5C_associated_SNPs_38283 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:109801334-109801362
64251 chr2 32724719 32724719 1 + C T STAD 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCTGTGATAGAATCGGTTACATTTTTAGTGCACC < 41bp 1 0.0445541418115402 1 0.238208919763565 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724719 synonymous SNV . 0 10 hm5C_associated_SNPs_38287 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:32724680-32724720
64251 chr15 99434708 99434708 1 + G A STAD 99434698 + 99434678 99434718 41 CTATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCT CTATGCCGGTGTCTGTGTGCCTGCCTGCCCACCCAACACCT < 41bp 1 0.258991223035821 1 0.421417444944382 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99434698 chr15:99434708 synonymous SNV . 0 31 hm5C_associated_SNPs_38288 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:99434677-99434714
64251 chr5 130726771 130726771 1 + C T STAD 130726785 + 130726765 130726805 41 TGGATACGAAGGCGGGATAGCCCTGGTCCTTTCTCCAGTGA TGGATATGAAGGCGGGATAGCCCTGGTCCTTTCTCCAGTGA < 41bp 1 0.53234129674954 1 0.0822742879390717 experiment 0.93531740650092 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130726785 chr5:130726771 nonsynonymous SNV 0.994 3 7 hm5C_associated_SNPs_38291 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:130726762-130726800
64251 chr19 38572477 38572477 1 + A G STAD 38572457 + 38572437 38572477 41 GGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGA GGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGG < 41bp 1 0.204404397214225 1 0.442471623420715 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572457 chr19:38572477 nonsynonymous SNV 0.996 2 41 hm5C_associated_SNPs_38292 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr19 38572477 38572477 1 + A G STAD 38572464 + 38572444 38572484 41 GCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTG GCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGGGGCCCTG < 41bp 1 0.16309294044924 1 0.208047837018967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572464 chr19:38572477 nonsynonymous SNV 0.996 2 34 hm5C_associated_SNPs_38293 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr19 38572477 38572477 1 + A G STAD 38572465 + 38572445 38572485 41 CGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGA CGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGGGGCCCTGA < 41bp 1 0.230113375434527 1 0.242983609437943 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572465 chr19:38572477 nonsynonymous SNV 0.996 2 33 hm5C_associated_SNPs_38294 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr19 38572477 38572477 1 + A G STAD 38572467 + 38572447 38572487 41 CAAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGA CAAGGGTGGCCGACTGGCCGCCCAAGCGGGGGGCCCTGAGA < 41bp 1 0.18067041757514 1 0.41647469997406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572467 chr19:38572477 nonsynonymous SNV 0.996 2 31 hm5C_associated_SNPs_38295 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr19 38572477 38572477 1 + A G STAD 38572468 + 38572448 38572488 41 AAGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGAG AAGGGTGGCCGACTGGCCGCCCAAGCGGGGGGCCCTGAGAG < 41bp 1 0.0746604979807643 1 0.666555881500244 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572468 chr19:38572477 nonsynonymous SNV 0.996 2 30 hm5C_associated_SNPs_38296 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr19 38572477 38572477 1 + A G STAD 38572469 + 38572449 38572489 41 AGGGTGGCCGACTGGCCGCCCAAGCGGGAGGCCCTGAGAGA AGGGTGGCCGACTGGCCGCCCAAGCGGGGGGCCCTGAGAGA < 41bp 1 0.232271226875816 1 0.671252369880676 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572469 chr19:38572477 nonsynonymous SNV 0.996 2 29 hm5C_associated_SNPs_38297 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572476-38572477
64251 chr20 30723902 30723902 1 + C T STAD 30723891 + 30723871 30723911 41 CATCAGGCTGTGAAGCTCACCAGCTCTCGAACCCAGCTACC CATCAGGCTGTGAAGCTCACCAGCTCTCGAATCCAGCTACC < 41bp 1 0.457199695000418 1 0.293982446193695 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30723891 chr20:30723902 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_38298 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:30723877-30723914
64251 chr7 94293284 94293284 1 + G A STAD 94293303 + 94293283 94293323 41 CGCTCCCACTACCTGATGCACAACTACCCAGCTTTCATGAT CACTCCCACTACCTGATGCACAACTACCCAGCTTTCATGAT < 41bp 1 0.16301362392879 1 0.03469318151474 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293303 chr7:94293284 nonsynonymous SNV 0.139 2 2 hm5C_associated_SNPs_38305 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:94293280-94293320
64251 chr1 107599615 107599615 1 + C T STAD 107599619 + 107599599 107599639 41 GACGTGGGCGCGGGCACCGGCATTCTGAGCATCTTCTGTGC GACGTGGGCGCGGGCATCGGCATTCTGAGCATCTTCTGTGC < 41bp 1 0.301300020974895 1 0.321789145469666 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599619 chr1:107599615 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_38308 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:107599566-107599625
64251 chr1 984699 984699 1 + G A STAD 984697 + 984677 984717 41 TGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC TGGCACCGCCTGGAGCTGTCCCAGCACTGGCGCCGGGGCAC < 41bp 1 0.17394097102001 1 0.463614076375961 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984697 chr1:984699 nonsynonymous SNV 0.189 4 23 hm5C_associated_SNPs_38319 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984699 984699 1 + G A STAD 984698 + 984678 984718 41 GGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACC GGCACCGCCTGGAGCTGTCCCAGCACTGGCGCCGGGGCACC < 41bp 1 0.72244901120904 1 0.761568903923035 experiment 0.55510197758192 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984698 chr1:984699 nonsynonymous SNV 0.189 4 22 hm5C_associated_SNPs_38320 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984699 984699 1 + G A STAD 984701 + 984681 984721 41 ACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACCCTC ACCGCCTGGAGCTGTCCCAGCACTGGCGCCGGGGCACCCTC < 41bp 1 0.315023936291663 1 0.399055391550064 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984701 chr1:984699 nonsynonymous SNV 0.189 4 19 hm5C_associated_SNPs_38321 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984699 984699 1 + G A STAD 984709 + 984689 984729 41 GAGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGA GAGCTGTCCCAGCACTGGCGCCGGGGCACCCTCTCGGTGGA < 41bp 1 0.382566800124853 1 0.699392318725586 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984709 chr1:984699 nonsynonymous SNV 0.189 4 11 hm5C_associated_SNPs_38322 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984699 984699 1 + G A STAD 984710 + 984690 984730 41 AGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT AGCTGTCCCAGCACTGGCGCCGGGGCACCCTCTCGGTGGAT < 41bp 1 0.459301784859321 1 0.758155941963196 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984710 chr1:984699 nonsynonymous SNV 0.189 4 10 hm5C_associated_SNPs_38323 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr5 72201192 72201192 1 + T C STAD 72201196 + 72201176 72201216 41 GTTTCTCTGACCAGTTTCCTCTTCCCTTAAAAGAGCGTCTT GTTTCTCTGACCAGTTCCCTCTTCCCTTAAAAGAGCGTCTT < 41bp 1 0.174305709260739 1 0.560324430465698 experiment 1 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72201196 chr5:72201192 synonymous SNV . 0 17 hm5C_associated_SNPs_38326 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72201144-72201203
64251 chr11 68177424 68177424 1 + G A STAD 68177413 + 68177393 68177433 41 CGCCTTCATGAACGGGAGCTCGGTGGAGCACGTGGTGGAGT CGCCTTCATGAACGGGAGCTCGGTGGAGCACATGGTGGAGT < 41bp 1 0.440304152650468 1 0.623640477657318 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68177413 chr11:68177424 nonsynonymous SNV 0.956 4 32 hm5C_associated_SNPs_38327 0 0 1 PPIG POSTAR2 ENCODE chr11:68177418-68177504
64251 chr16 31122516 31122516 1 + C T STAD 31122511 + 31122491 31122531 41 CCTATGCCACTGGACTACATCCTGCCGGAGCTGCTCAAGAA CCTATGCCACTGGACTACATCCTGCTGGAGCTGCTCAAGAA < 41bp 1 0.186161867492705 1 0.188781321048737 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BCKDK ENSG00000103507 CDS Human protein_coding chr16:31122511 chr16:31122516 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_38328 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:31122506-31122536
64251 chr11 65403889 65403889 1 + G A STAD 65403903 + 65403883 65403923 41 CACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGC CACCAGACCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGC < 41bp 1 0.185635713727987 1 0.341803729534149 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403903 chr11:65403889 nonsynonymous SNV 0.999 2 7 hm5C_associated_SNPs_38329 0 0 3 EFTUD2 POSTAR2 ENCODE chr11:65403805-65403891
64251 chr11 65403889 65403889 1 + G A STAD 65403904 + 65403884 65403924 41 ACCAGGCCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGCT ACCAGACCCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGCT < 41bp 1 0.418166275207156 1 0.610556602478027 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403904 chr11:65403889 nonsynonymous SNV 0.999 2 6 hm5C_associated_SNPs_38330 0 0 3 EFTUD2 POSTAR2 ENCODE chr11:65403805-65403891
64251 chr11 67376963 67376963 1 + G T STAD 67376960 + 67376940 67376980 41 TGAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGG TGAACGCAGACGAGGGGGAGCCGTGCACCTGCAAGGACCGG < 41bp 1 0.14761928765657 1 0.410029947757721 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376960 chr11:67376963 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_38331 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr11 93530729 93530729 1 + T C STAD 93530714 + 93530694 93530734 41 TTGTTAGTTTCATAAACAGACCTTGAGTTCCATCATGATGC TTGTTAGTTTCATAAACAGACCTTGAGTTCCATCACGATGC < 41bp 1 0.037881909150022 1 0.0139822661876678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED17 ENSG00000042429 CDS Human protein_coding chr11:93530714 chr11:93530729 nonsynonymous SNV 0.996 0 36 hm5C_associated_SNPs_38332 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:93530727-93530743
64251 chr20 43545461 43545461 1 + C T STAD 43545459 + 43545439 43545479 41 CATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC CATTTTGAGACCCATGAGGCCGTACAGCAGGCCATCAACAC < 41bp 1 0.0961904035852063 1 0.0257230699062347 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545459 chr20:43545461 nonsynonymous SNV 0.067 4 23 hm5C_associated_SNPs_38333 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr20:43545460-43545480
64251 chr17 46189966 46189966 1 + C T STAD 46189985 + 46189965 46190005 41 CCGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT CTGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT < 41bp 1 0.133432070120468 1 0.240906685590744 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX11 ENSG00000002919 CDS Human protein_coding chr17:46189985 chr17:46189966 stopgain 0.997 1 2 hm5C_associated_SNPs_38334 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:46189941-46189971
64251 chr1 6692469 6692469 1 + G C STAD 6692470 + 6692450 6692490 41 GGTCCTCCCTGAGGCGGGGGCCGGAGAGGACAGTCCTGGGA GGTCCTCCCTGAGGCGGGGCCCGGAGAGGACAGTCCTGGGA < 41bp 1 0.736780822609534 1 0.457094013690948 experiment 0.526438354780931 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692470 chr1:6692469 nonsynonymous SNV 0.002 1 20 hm5C_associated_SNPs_38336 0 0 1 SF3B1 POSTAR2 ENCODE chr1:6692444-6692474
64251 chr17 74383602 74383602 1 + G A STAD 74383622 + 74383602 74383642 41 GGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGAT AGTTGCGTGGAGCCCCCGCCCAGCTGGAAGCCCCAGCAGAT < 41bp 1 0.580779927723416 1 0.723006367683411 experiment 0.838440144553169 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383622 chr17:74383602 nonsynonymous SNV 0.183 1 1 hm5C_associated_SNPs_38338 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:74383589-74383628
64251 chr5 173378896 173378896 1 + C T STAD 173378893 + 173378873 173378913 41 ATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTT ATGGTTCACAGCCACTTGACCCATGAAAAACTATATTTGTT < 41bp 1 0.0730397349700726 1 0.284194558858871 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173378893 chr5:173378896 stopgain 1.000 1 24 hm5C_associated_SNPs_38340 0 0 1 BUD13 POSTAR2 ENCODE chr5:173378803-173378898
64251 chr5 82834774 82834774 1 + T G STAD 82834788 + 82834768 82834808 41 CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA CATATCGGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA < 41bp 1 0.0768751528380117 1 0.135614454746246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834788 chr5:82834774 synonymous SNV . 0 7 hm5C_associated_SNPs_38341 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:82834706-82834775
64251 chr11 62502877 62502877 1 + G A STAD 62502861 + 62502841 62502881 41 TTTGGCCCATTAGCTTGTCTCCTTCAGATGGAGCCCGTGAA TTTGGCCCATTAGCTTGTCTCCTTCAGATGGAGCCCATGAA < 41bp 1 0.0299810590926801 1 0.0481404364109039 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC9C ENSG00000162222 CDS Human protein_coding chr11:62502861 chr11:62502877 nonsynonymous SNV 0.993 2 37 hm5C_associated_SNPs_38343 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:62502860-62502880
64251 chr6 111288882 111288882 1 + T C STAD 111288899 + 111288879 111288919 41 GAGTTGTGAACAGGAGAAACCAATGCACTTGGAAATAGAAG GAGCTGTGAACAGGAGAAACCAATGCACTTGGAAATAGAAG < 41bp 1 0.252222784635355 1 0.338318884372711 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288899 chr6:111288882 synonymous SNV . 0 4 hm5C_associated_SNPs_38344 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:111288825-111288893
64251 chr19 50304308 50304308 1 + C T STAD 50304305 + 50304285 50304325 41 GGAACCTGATTGCTGGGGACCCCCGCTCCAGGTGAGGGAGC GGAACCTGATTGCTGGGGACCCCTGCTCCAGGTGAGGGAGC < 41bp 1 0.097943240666306 1 0.138675093650818 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50304305 chr19:50304308 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_38345 0 0 7 DDX24 POSTAR2 ENCODE chr19:50304272-50304314
64251 chr7 4824582 4824582 1 + C T STAD 4824600 + 4824580 4824620 41 TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA TCTGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA < 41bp 1 0.148803391799928 1 0.369605958461761 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824600 chr7:4824582 synonymous SNV . 0 3 hm5C_associated_SNPs_38346 0 0 3 BUD13 POSTAR2 ENCODE chr7:4824538-4824608
64251 chr6 161510475 161510475 1 + T C STAD 161510492 + 161510472 161510512 41 CGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC CGGCCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC < 41bp 1 0.692582408535559 1 0.715278744697571 experiment 0.614835182928883 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161510492 chr6:161510475 nonsynonymous SNV 0.990 0 4 hm5C_associated_SNPs_38348 0 0 6 FXR2 POSTAR2 ENCODE chr6:161510435-161510479
64251 chr20 34430649 34430649 1 + G A STAD 34430662 + 34430642 34430682 41 CTTGCATGAAGAGGATGGATCTTCTGTGAGTAACAAATCTG CTTGCATAAAGAGGATGGATCTTCTGTGAGTAACAAATCTG < 41bp 1 0.141202456631075 1 0.0790989995002747 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF20 ENSG00000025293 CDS Human protein_coding chr20:34430662 chr20:34430649 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_38349 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34430645-34430667
64251 chr12 109547651 109547651 1 + A G STAD 109547637 + 109547617 109547657 41 TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTACAGACG TTCTTGATCTTTTTCAGAAGCGGCACCATGTACTGCAGACG < 41bp 1 0.597390317639233 1 0.380740910768509 experiment 0.805219364721534 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547637 chr12:109547651 synonymous SNV . 0 35 hm5C_associated_SNPs_38350 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr12 109547651 109547651 1 + A G STAD 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TGCAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG < 41bp 1 0.0495291942844189 1 0.0481204092502594 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547651 synonymous SNV . 0 2 hm5C_associated_SNPs_38351 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr16 30749172 30749172 1 + C G STAD 30749182 + 30749162 30749202 41 TCTCTCACCCCTTCTGCACCCAGCCTGACCTTGGAGGCTGG TCTCTCACCCGTTCTGCACCCAGCCTGACCTTGGAGGCTGG < 41bp 1 0.245818917283754 1 0.372239738702774 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30749182 chr16:30749172 nonsynonymous SNV 0.513 2 11 hm5C_associated_SNPs_38352 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30749099-30749174
64251 chr1 249210816 249210816 1 + G A STAD 249210825 + 249210805 249210845 41 GTCATTGCTGGGAGAGGTATCCACTCAAAGGTGAAGTCTGC GTCATTGCTGGAAGAGGTATCCACTCAAAGGTGAAGTCTGC < 41bp 1 0.162935584415321 1 0.221155881881714 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249210825 chr1:249210816 synonymous SNV . 0 12 hm5C_associated_SNPs_38353 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:249210800-249210820
64251 chr17 7160303 7160303 1 + C A STAD 7160304 + 7160284 7160324 41 CCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTG CCCTGGGCGGTACCATGGGACAGGCCTCGGCCCACATCCTG < 41bp 1 0.73124051166483 1 0.725214123725891 experiment 0.53751897667034 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160304 chr17:7160303 synonymous SNV . 0 20 hm5C_associated_SNPs_38354 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr17 7160303 7160303 1 + C A STAD 7160314 + 7160294 7160334 41 TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGC TACCATGGGACAGGCCTCGGCCCACATCCTGTGTCGGAGGC < 41bp 1 0.230354019357246 1 0.345026552677155 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160314 chr17:7160303 synonymous SNV . 0 10 hm5C_associated_SNPs_38355 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr17 7160303 7160303 1 + C A STAD 7160315 + 7160295 7160335 41 ACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCC ACCATGGGACAGGCCTCGGCCCACATCCTGTGTCGGAGGCC < 41bp 1 0.514577942573851 1 0.365399420261383 experiment 0.970844114852299 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160315 chr17:7160303 synonymous SNV . 0 9 hm5C_associated_SNPs_38356 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr17 7160303 7160303 1 + C A STAD 7160316 + 7160296 7160336 41 CCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCC CCATGGGACAGGCCTCGGCCCACATCCTGTGTCGGAGGCCC < 41bp 1 0.413908342821865 1 0.0708182454109192 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160316 chr17:7160303 synonymous SNV . 0 8 hm5C_associated_SNPs_38357 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:7160270-7160306
64251 chr10 76788893 76788893 1 + C A STAD 76788889 + 76788869 76788909 41 GGATGACAGCCACATGGAGTCTGCCGAAGTGGAGAAGGAAG GGATGACAGCCACATGGAGTCTGCAGAAGTGGAGAAGGAAG < 41bp 1 0.713838923916968 1 0.552465736865997 experiment 0.572322152166064 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76788889 chr10:76788893 synonymous SNV . 0 25 hm5C_associated_SNPs_38358 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:76788882-76788899
64251 chr10 76788893 76788893 1 + C A STAD 76788892 + 76788872 76788912 41 TGACAGCCACATGGAGTCTGCCGAAGTGGAGAAGGAAGAGC TGACAGCCACATGGAGTCTGCAGAAGTGGAGAAGGAAGAGC < 41bp 1 0.536766504910244 1 0.494789004325867 experiment 0.926466990179512 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76788892 chr10:76788893 synonymous SNV . 0 22 hm5C_associated_SNPs_38359 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:76788882-76788899
64251 chr1 116940630 116940630 1 + G T STAD 116940615 + 116940595 116940635 41 GAGATAGTGTTTGCCAGGACCTCCCCTCAGCAGAAGCTCAT GAGATAGTGTTTGCCAGGACCTCCCCTCAGCAGAATCTCAT < 41bp 1 0.223245074893915 1 0.178456783294678 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116940615 chr1:116940630 nonsynonymous SNV 1.000 5 36 hm5C_associated_SNPs_38361 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116940516-116940641
64251 chr11 9462002 9462002 1 + A C STAD 9462007 + 9461987 9462027 41 ATTATGACTTGGCAGAGGAACTGGGGAGTGATGAAGATGAT ATTATGACTTGGCAGCGGAACTGGGGAGTGATGAAGATGAT < 41bp 1 0.611801170059647 1 0.460153162479401 experiment 0.776397659880707 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462007 chr11:9462002 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_38363 0 0 9 CPSF6 POSTAR2 ENCODE chr11:9461998-9462036
64251 chr11 65733407 65733407 1 + T G STAD 65733404 + 65733384 65733424 41 GGGCCTCACCGTGGAGCATGCCATTGATTCCTTCCGAGAAG GGGCCTCACCGTGGAGCATGCCAGTGATTCCTTCCGAGAAG < 41bp 1 0.310670205197306 1 0.252646148204803 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SART1 ENSG00000175467 CDS Human protein_coding chr11:65733404 chr11:65733407 nonsynonymous SNV 0.978 4 24 hm5C_associated_SNPs_38364 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65733383-65733421
64251 chr1 29069012 29069012 1 + C T STAD 29069000 + 29068980 29069020 41 CTCCTATTCTTTGGGTGAAGCTGCTTGGTCTACGGGGGGTG CTCCTATTCTTTGGGTGAAGCTGCTTGGTCTATGGGGGGTG < 41bp 1 0.507763230499325 1 0.259006857872009 experiment 0.984473539001349 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069000 chr1:29069012 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_38365 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr21 47841990 47841990 1 + G A STAD 47842001 + 47841981 47842021 41 GTTTCAGCCGCTGCCGGAAGCCATGAAGGAGAAGGAAGTGC GTTTCAGCCACTGCCGGAAGCCATGAAGGAGAAGGAAGTGC < 41bp 1 0.0468475164425889 1 0.231780380010605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47842001 chr21:47841990 synonymous SNV . 0 10 hm5C_associated_SNPs_38366 0 0 1 PRPF8 POSTAR2 ENCODE chr21:47841987-47842095
64251 chr2 216214278 216214278 1 + C T STAD 216214285 + 216214265 216214305 41 GTGGCGTACATTGCGGCTCCCTCCGGTTCTGCTGCTGACAA GTGGCGTACATTGTGGCTCCCTCCGGTTCTGCTGCTGACAA < 41bp 1 0.723014583113923 1 0.249990493059158 experiment 0.553970833772154 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216214285 chr2:216214278 nonsynonymous SNV 0.698 0 14 hm5C_associated_SNPs_38367 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:216214260-216214280
64251 chr19 7620635 7620635 1 + C T STAD 7620645 + 7620625 7620665 41 GCAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA GCAGCGGGCCTGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA < 41bp 1 0.267417857884463 1 0.432141751050949 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620645 chr19:7620635 nonsynonymous SNV 0.994 3 11 hm5C_associated_SNPs_38368 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr19 7620635 7620635 1 + C T STAD 7620646 + 7620626 7620666 41 CAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG CAGCGGGCCTGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG < 41bp 1 0.474405093642405 1 0.735196471214294 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620646 chr19:7620635 nonsynonymous SNV 0.994 3 10 hm5C_associated_SNPs_38369 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr1 95657235 95657235 1 + C T STAD 95657252 + 95657232 95657272 41 TTCCGTGTATGGAACAGAACCCTACATAAGGCTTGGAGTTT TTCTGTGTATGGAACAGAACCCTACATAAGGCTTGGAGTTT < 41bp 1 0.0353064938407536 1 0.115271389484406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM56 ENSG00000152078 CDS Human protein_coding chr1:95657252 chr1:95657235 synonymous SNV . 0 4 hm5C_associated_SNPs_38370 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:95657219-95657241
64251 chr11 66391987 66391987 1 + C T STAD 66391986 + 66391966 66392006 41 CCACCCTTCTTTGGTCGCGACCGCAGCCCTCTGCGCCGTTC CCACCCTTCTTTGGTCGCGACTGCAGCCCTCTGCGCCGTTC < 41bp 1 0.767447439274009 1 0.471296787261963 experiment 0.465105121451981 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM14 ENSG00000239306 CDS Human protein_coding chr11:66391986 chr11:66391987 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_38371 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:66391959-66391987
64251 chr6 35392251 35392251 1 + G A STAD 35392256 + 35392236 35392276 41 CAGTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGC CAGTGGAGACCGTGCAGGAGCTCACTGAGTTCGCCAAGAGC < 41bp 1 0.218988259894296 1 0.111109375953674 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392256 chr6:35392251 nonsynonymous SNV 0.856 3 16 hm5C_associated_SNPs_38372 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35392251 35392251 1 + G A STAD 35392258 + 35392238 35392278 41 GTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGCAT GTGGAGACCGTGCAGGAGCTCACTGAGTTCGCCAAGAGCAT < 41bp 1 0.41657032013323 1 0.119407385587692 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392258 chr6:35392251 nonsynonymous SNV 0.856 3 14 hm5C_associated_SNPs_38373 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr16 72134477 72134477 1 + G A STAD 72134463 + 72134443 72134483 41 GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGT GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCACATTGT < 41bp 1 0.0778507495910708 1 0.0394468009471893 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134463 chr16:72134477 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_38374 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:72134440-72134478
64251 chr19 40882619 40882619 1 + C T STAD 40882624 + 40882604 40882644 41 TCGGAGCCATCCATGCGGGCCTTCCTGCTCTCTCTGGCTGC TCGGAGCCATCCATGTGGGCCTTCCTGCTCTCTCTGGCTGC < 41bp 1 0.0967221388728527 1 0.0333593487739563 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40882624 chr19:40882619 nonsynonymous SNV 0.850 1 16 hm5C_associated_SNPs_38375 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221664 chr19:40882600-40882620
64251 chr20 279025 279025 1 + C T STAD 279018 + 278998 279038 41 CATCCTCTTCCGGAACGAGACGGTGGACGTGGAGGACATTG CATCCTCTTCCGGAACGAGACGGTGGATGTGGAGGACATTG < 41bp 1 0.570666972353456 1 0.500954806804657 experiment 0.858666055293088 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZCCHC3 ENSG00000177764 CDS Human other chr20:279018 chr20:279025 synonymous SNV . 0 28 hm5C_associated_SNPs_38376 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:279000-279060
64251 chr8 30623815 30623815 1 + C T STAD 30623821 + 30623801 30623841 41 CTTCCTTTCCCAGACGGCCTCTGGCAGTGGAGGGAGGCCAG CTTCCTTTCCCAGATGGCCTCTGGCAGTGGAGGGAGGCCAG < 41bp 1 0.678383021851424 1 0.484572261571884 experiment 0.643233956297152 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30623821 chr8:30623815 . 0.217 2 15 hm5C_associated_SNPs_38377 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:30623792-30623815
64251 chr2 235949729 235949729 1 + T C STAD 235949741 + 235949721 235949761 41 ACATCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAAC ACATCCCCCCCTCCTATGTGCAGCCCTTGAACTACCGGAAC < 41bp 1 0.181311202659309 1 0.0971392095088959 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949741 chr2:235949729 nonsynonymous SNV 0.976 2 9 hm5C_associated_SNPs_38378 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr2 235949729 235949729 1 + T C STAD 235949744 + 235949724 235949764 41 TCCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA TCCCCCCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCA < 41bp 1 0.0159238473832295 1 0.0474013090133667 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949744 chr2:235949729 nonsynonymous SNV 0.976 2 6 hm5C_associated_SNPs_38379 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr2 235949729 235949729 1 + T C STAD 235949745 + 235949725 235949765 41 CCCCTCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA CCCCCCCTCCTATGTGCAGCCCTTGAACTACCGGAACTCAA < 41bp 1 0.0221261045230919 1 0.0944024622440338 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235949745 chr2:235949729 nonsynonymous SNV 0.976 2 5 hm5C_associated_SNPs_38380 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:235949718-235949738
64251 chr1 27023420 27023420 1 + C T STAD 27023411 + 27023391 27023431 41 CCGCCGTCTTCCACCAACAACATGGCGGACAACAAAGCCCT CCGCCGTCTTCCACCAACAACATGGCGGATAACAAAGCCCT < 41bp 1 0.334622214252179 1 0.34809023141861 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27023411 chr1:27023420 stopgain 1.000 0 30 hm5C_associated_SNPs_38381 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27023368-27023450
64251 chr11 67075666 67075666 1 + C T STAD 67075677 + 67075657 67075697 41 CTGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGA CTGGAGCTGTGCCTGGGGCTCCCCCTCCAGCAGTACCGTGA < 41bp 1 0.180471987157035 1 0.0694246292114258 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075677 chr11:67075666 nonsynonymous SNV 0.900 4 10 hm5C_associated_SNPs_38383 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67075651-67075708
64251 chr21 17250145 17250145 1 + G A STAD 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCAAATCTG < 41bp 1 0.479172747891236 1 0.437711954116821 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250145 nonsynonymous SNV 0.992 2 35 hm5C_associated_SNPs_38398 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chr11 65978630 65978630 1 + C T STAD 65978631 + 65978611 65978651 41 CATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT CATTTCCTTAAGCGAGATGTCAACAAGCTGCAGATCATGCT < 41bp 1 0.361375329922813 1 0.532347559928894 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978631 chr11:65978630 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_38399 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978630 65978630 1 + C T STAD 65978638 + 65978618 65978658 41 TTAAGCGAGATGCCAACAAGCTGCAGATCATGCTGCAAAGG TTAAGCGAGATGTCAACAAGCTGCAGATCATGCTGCAAAGG < 41bp 1 0.602911933298718 1 0.163117825984955 experiment 0.794176133402565 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978638 chr11:65978630 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_38400 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr4 126337721 126337721 1 + G A STAD 126337729 + 126337709 126337749 41 GAGTAACACAGAGTCTGGATCGGGAAACAAAAGAGCGCTTT GAGTAACACAGAATCTGGATCGGGAAACAAAAGAGCGCTTT < 41bp 1 0.562870771625769 1 0.938445806503296 experiment 0.874258456748462 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126337729 chr4:126337721 nonsynonymous SNV 0.936 0 13 hm5C_associated_SNPs_38407 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126337719-126337730
64251 chr2 39008775 39008775 1 + T G STAD 39008755 + 39008735 39008775 41 GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCT GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCG < 41bp 1 0.256695648408611 1 0.0850294232368469 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008755 chr2:39008775 nonsynonymous SNV 0.985 4 41 hm5C_associated_SNPs_38408 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:39008744-39008780
64251 chr6 158900925 158900925 1 + G A STAD 158900920 + 158900900 158900940 41 CAGCAGGCCATCGCCAGCACCTTGCGTGAGGACAAGGACGT CAGCAGGCCATCGCCAGCACCTTGCATGAGGACAAGGACGT < 41bp 1 0.143299837684267 1 0.249246686697006 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158900920 chr6:158900925 nonsynonymous SNV 0.928 0 26 hm5C_associated_SNPs_38412 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:158900914-158900946
64251 chr1 27088709 27088709 1 + C T STAD 27088714 + 27088694 27088734 41 GCTCAGCCTTATCTCCGCGTCAGCCTTCCGGAGGACAGATA GCTCAGCCTTATCTCTGCGTCAGCCTTCCGGAGGACAGATA < 41bp 1 0.247857506968231 1 0.15415957570076 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27088714 chr1:27088709 nonsynonymous SNV 0.998 2 16 hm5C_associated_SNPs_38413 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:27088700-27088720
64251 chr11 45891672 45891672 1 + C T STAD 45891669 + 45891649 45891689 41 GGCAGCTGGATGTGGCTGTCCTGCAGTGCTTTCTTCCAGCA GGCAGCTGGATGTGGCTGTCCTGTAGTGCTTTCTTCCAGCA < 41bp 1 0.709430370809519 1 0.431254923343658 experiment 0.581139258380962 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45891669 chr11:45891672 synonymous SNV . 0 24 hm5C_associated_SNPs_38415 0 0 1 DDX24 POSTAR2 ENCODE chr11:45891656-45891724
64251 chr1 117626657 117626657 1 + T C STAD 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA CCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA < 41bp 1 0.142033961834732 1 0.103403776884079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626657 nonsynonymous SNV 0.444 4 1 hm5C_associated_SNPs_38418 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117626608-117626693
64251 chr20 30155910 30155910 1 + A G STAD 30155892 + 30155872 30155912 41 CTCACACAGCTACGAGTCCTCGGCGGAAATCCTGCCTCATA CTCACACAGCTACGAGTCCTCGGCGGAAATCCTGCCTCGTA < 41bp 1 0.749394775721622 1 0.921732068061829 experiment 0.501210448556755 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HM13 ENSG00000101294 CDS Human protein_coding chr20:30155892 chr20:30155910 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_38419 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1486177 chr20:30155900-30155920
64251 chr11 67818098 67818098 1 + T G STAD 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACGCTCAGCCTTCCTGCACGCCCTGCGGC < 41bp 1 0.037421153767548 1 0.213667929172516 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818098 nonsynonymous SNV 0.998 5 15 hm5C_associated_SNPs_38420 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818098 67818098 1 + T G STAD 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACGCTCAGCCTTCCTGCACGCCCTGCGGCT < 41bp 1 0.172127955067236 1 0.442100465297699 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818098 nonsynonymous SNV 0.998 5 14 hm5C_associated_SNPs_38421 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr1 154313343 154313343 1 + C T STAD 154313339 + 154313319 154313359 41 CCCCTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTA CCCCTGTGCAGTGTGGAGGTCATCTGTCTGGGCCACAGCTA < 41bp 1 0.200698676324515 1 0.0464804768562317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313339 chr1:154313343 nonsynonymous SNV 0.997 5 25 hm5C_associated_SNPs_38425 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr1 154313343 154313343 1 + C T STAD 154313342 + 154313322 154313362 41 CTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTACTT CTGTGCAGTGTGGAGGTCATCTGTCTGGGCCACAGCTACTT < 41bp 1 0.404812182386646 1 0.0632658898830414 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313342 chr1:154313343 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_38426 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr11 66249784 66249784 1 + C T STAD 66249791 + 66249771 66249811 41 GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGC GCCTACCACCTGTTCCGTGCCGCCTGGTACGGAGGCCTGGC < 41bp 1 0.542321369456167 1 0.305467188358307 experiment 0.915357261087665 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249791 chr11:66249784 nonsynonymous SNV 0.711 4 14 hm5C_associated_SNPs_38427 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249784 66249784 1 + C T STAD 66249793 + 66249773 66249813 41 CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTG CTACCACCTGTTCCGTGCCGCCTGGTACGGAGGCCTGGCTG < 41bp 1 0.314443505126106 1 0.150915086269379 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249793 chr11:66249784 nonsynonymous SNV 0.711 4 12 hm5C_associated_SNPs_38428 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249784 66249784 1 + C T STAD 66249794 + 66249774 66249814 41 TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTGT TACCACCTGTTCCGTGCCGCCTGGTACGGAGGCCTGGCTGT < 41bp 1 0.709948641680268 1 0.43035626411438 experiment 0.580102716639463 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249794 chr11:66249784 nonsynonymous SNV 0.711 4 11 hm5C_associated_SNPs_38429 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr6 161510480 161510480 1 + G A STAD 161510492 + 161510472 161510512 41 CGGTCATCGCCAAAGCTTTGCAGCAGCTGAAGGTATTACAC CGGTCATCACCAAAGCTTTGCAGCAGCTGAAGGTATTACAC < 41bp 1 0.617028954593287 1 0.508257865905762 experiment 0.765942090813426 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161510492 chr6:161510480 nonsynonymous SNV 0.994 2 9 hm5C_associated_SNPs_38430 0 0 4 GRWD1 POSTAR2 ENCODE chr6:161510439-161510490
64251 chr18 48604699 48604699 1 + A T STAD 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAATGGCTGGGGACCGGATTACCCAAGACAGAGCA < 41bp 1 0.495617256838193 1 0.706131458282471 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604699 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_38431 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:48604680-48604700
64251 chr19 1912876 1912876 1 + G A STAD 1912858 + 1912838 1912878 41 CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCG CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCACG < 41bp 1 0.113074240133377 1 0.177579075098038 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912858 chr19:1912876 nonsynonymous SNV 0.001 1 39 hm5C_associated_SNPs_38432 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:1912834-1912878
64251 chr3 42251455 42251455 1 + A C STAD 42251472 + 42251452 42251492 41 TCCAGTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCAAG TCCCGTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCAAG < 41bp 1 0.194649572340248 1 0.110847383737564 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42251472 chr3:42251455 synonymous SNV . 0 4 hm5C_associated_SNPs_38433 0 0 3 BUD13 POSTAR2 ENCODE chr3:42251385-42251502
64251 chr8 61655342 61655342 1 + G A STAD 61655344 + 61655324 61655364 41 ATCGGACAGAGGAATATGGGCCCCAGAAACATGCAGCAGTC ATCGGACAGAGGAATATGAGCCCCAGAAACATGCAGCAGTC < 41bp 1 0.425702178128817 1 0.204682290554047 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHD7 ENSG00000171316 CDS Human protein_coding chr8:61655344 chr8:61655342 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_38434 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:61655305-61655349
64251 chr5 14359556 14359556 1 + G A STAD 14359551 + 14359531 14359571 41 TGCAGCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTC TGCAGCAGCTGGACGAGGCGCAGTCACAGATGGAGGAGCTC < 41bp 1 0.0448603594611911 1 0.219469010829926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359551 chr5:14359556 synonymous SNV . 0 26 hm5C_associated_SNPs_38435 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr5 14359556 14359556 1 + G A STAD 14359555 + 14359535 14359575 41 GCAGCTGGACGAGGCGCAGTCGCAGATGGAGGAGCTCTTCC GCAGCTGGACGAGGCGCAGTCACAGATGGAGGAGCTCTTCC < 41bp 1 0.550857139714109 1 0.763787150382996 experiment 0.898285720571781 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359555 chr5:14359556 synonymous SNV . 0 22 hm5C_associated_SNPs_38436 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:14359520-14359572
64251 chr6 33657074 33657074 1 + G T STAD 33657075 + 33657055 33657095 41 CCTCATCTGCTTCTCCATCGCGGCCCTGTTCACCAAGCGCT CCTCATCTGCTTCTCCATCTCGGCCCTGTTCACCAAGCGCT < 41bp 1 0.276413903679729 1 0.560659468173981 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33657075 chr6:33657074 nonsynonymous SNV 0.206 2 20 hm5C_associated_SNPs_38437 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:33657052-33657081
64251 chr8 145535422 145535422 1 + G A STAD 145535406 + 145535386 145535426 41 GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCC GCCCCCTCCCCAGCCTACAGCAGCTCCAGCCTCTACACCCC < 41bp 1 0.333598860497662 1 0.319120466709137 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535406 chr8:145535422 nonsynonymous SNV 0.072 0 37 hm5C_associated_SNPs_38438 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr8:145535396-145535434
64251 chr3 10191562 10191562 1 + C T STAD 10191581 + 10191561 10191601 41 ACGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG ATGAAGATCTGGAAGACCACCCAAATGTGCAGAAAGACCTG < 41bp 1 0.49730646114902 1 0.254731416702271 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VHL ENSG00000134086 CDS Human protein_coding chr3:10191581 chr3:10191562 synonymous SNV . 0 2 hm5C_associated_SNPs_38439 3 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr2 101622447 101622447 1 + G A STAD 101622433 + 101622413 101622453 41 TTTATTAGGAATGTGCCATACCGAATCCGTGTGCGGCTGTC TTTATTAGGAATGTGCCATACCGAATCCGTGTGCAGCTGTC < 41bp 1 0.732288554758075 1 0.291333436965942 experiment 0.53542289048385 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622433 chr2:101622447 nonsynonymous SNV 0.999 1 35 hm5C_associated_SNPs_38447 0 0 52 UPF1 POSTAR2 GSE69586,GSM1704218 chr2:101622400-101622460
64251 chr2 101622447 101622447 1 + G A STAD 101622446 + 101622426 101622466 41 TGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAAT TGCCATACCGAATCCGTGTGCAGCTGTCCAGAAAACGTAAT < 41bp 1 0.576868679013188 1 0.217112123966217 experiment 0.846262641973625 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622446 chr2:101622447 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_38448 0 0 52 UPF1 POSTAR2 GSE69586,GSM1704218 chr2:101622400-101622460
64251 chr2 101622447 101622447 1 + G A STAD 101622449 + 101622429 101622469 41 CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAG CATACCGAATCCGTGTGCAGCTGTCCAGAAAACGTAATGAG < 41bp 1 0.224430086089566 1 0.549625992774963 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622449 chr2:101622447 nonsynonymous SNV 0.999 1 19 hm5C_associated_SNPs_38449 0 0 52 UPF1 POSTAR2 GSE69586,GSM1704218 chr2:101622400-101622460
64251 chr2 101622447 101622447 1 + G A STAD 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCAGCTGTCCAGAAAACGTAATGAGGATG < 41bp 1 0.741202241436757 1 0.726750135421753 experiment 0.517595517126486 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622447 nonsynonymous SNV 0.999 1 15 hm5C_associated_SNPs_38450 0 0 52 UPF1 POSTAR2 GSE69586,GSM1704218 chr2:101622400-101622460
64251 chr2 101622447 101622447 1 + G A STAD 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCAGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA < 41bp 1 0.734812739533349 1 0.400820732116699 experiment 0.530374520933302 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622447 nonsynonymous SNV 0.999 1 7 hm5C_associated_SNPs_38451 0 0 52 UPF1 POSTAR2 GSE69586,GSM1704218 chr2:101622400-101622460
64251 chr8 21958382 21958382 1 + C T STAD 21958371 + 21958351 21958391 41 ACAGAGACCTGGAGGAAGACCCCTACTTCACCGACAGCTTC ACAGAGACCTGGAGGAAGACCCCTACTTCACTGACAGCTTC < 41bp 1 0.191480782806308 1 0.0960647165775299 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958371 chr8:21958382 synonymous SNV . 0 32 hm5C_associated_SNPs_38453 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:21958358-21958391
64251 chr5 64267563 64267563 1 + A G STAD 64267545 + 64267525 64267565 41 TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCCGAAT TTTAGAGGAAGAAGCCCCTCCAGATGGTGCTGTTGCCGGAT < 41bp 1 0.266657463304671 1 0.756618797779083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CWC27 ENSG00000153015 CDS Human protein_coding chr5:64267545 chr5:64267563 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_38454 0 0 2 GRWD1 POSTAR2 ENCODE chr5:64267538-64267634
64251 chr1 46739833 46739833 1 + G A STAD 46739819 + 46739799 46739839 41 TCCCCCTTCAGGTACTTATACGTCCGCCTGGATGGCACGAT TCCCCCTTCAGGTACTTATACGTCCGCCTGGATGACACGAT < 41bp 1 0.140731666818105 1 0.151619344949722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739819 chr1:46739833 nonsynonymous SNV 0.928 4 35 hm5C_associated_SNPs_38455 0 0 5 FMR1 POSTAR2 ENCODE chr1:46739812-46739850
64251 chr1 100480964 100480964 1 + A G STAD 100480954 + 100480934 100480974 41 TCAGGGATATAACCGACTGACCTGGATAGTAGTTGTTCTTC TCAGGGATATAACCGACTGACCTGGATAGTGGTTGTTCTTC < 41bp 1 0.233624832121249 1 0.0482563674449921 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC35A3 ENSG00000117620 CDS Human protein_coding chr1:100480954 chr1:100480964 synonymous SNV . 0 31 hm5C_associated_SNPs_38456 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:100480933-100480967
64251 chr22 40801789 40801789 1 + G A STAD 40801785 + 40801765 40801805 41 TCCAGACTGACCAGCGGGTCCTGCGCCACCTCATTGTCCAG TCCAGACTGACCAGCGGGTCCTGCACCACCTCATTGTCCAG < 41bp 1 0.680521573247556 1 0.175401329994202 experiment 0.638956853504888 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40801785 chr22:40801789 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_38457 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr22:40801785-40801823
64251 chr5 138658622 138658622 1 + G A STAD 138658604 + 138658584 138658624 41 AAAGGAACCATCAGATAAAGCTGTGAAAAAAGATGGAAGTG AAAGGAACCATCAGATAAAGCTGTGAAAAAAGATGGAAATG < 41bp 1 0.42029937958852 1 0.0732270479202271 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MATR3 ENSG00000015479 CDS Human protein_coding chr5:138658604 chr5:138658622 nonsynonymous SNV 0.998 0 39 hm5C_associated_SNPs_38459 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:138658608-138658630
64251 chr19 37853775 37853775 1 + A G STAD 37853759 + 37853739 37853779 41 CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCGAGGA < 41bp 1 0.341148532847554 1 0.184141784906387 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853759 chr19:37853775 nonsynonymous SNV 0.995 0 37 hm5C_associated_SNPs_38460 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr17 28772976 28772976 1 + A G STAD 28772959 + 28772939 28772979 41 ATCTGGCTCTGGCTCTTTATCGATACCATTCCTACAAAGAC ATCTGGCTCTGGCTCTTTATCGATACCATTCCTACAAGGAC < 41bp 1 0.548988464376769 1 0.78743714094162 experiment 0.902023071246462 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPD ENSG00000108582 CDS Human protein_coding chr17:28772959 chr17:28772976 synonymous SNV . 0 38 hm5C_associated_SNPs_38465 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28772960-28772983
64251 chr1 228333735 228333735 1 + A G STAD 228333718 + 228333698 228333738 41 CCCCGATGGGTGACAGGTCTCTCTGCTAGATACCACGAGGA CCCCGATGGGTGACAGGTCTCTCTGCTAGATACCACGGGGA < 41bp 1 0.603183635889855 1 0.157963037490845 experiment 0.79363272822029 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333718 chr1:228333735 nonsynonymous SNV 0.250 3 38 hm5C_associated_SNPs_38466 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:228333720-228333740
64251 chr9 131847002 131847002 1 + C A STAD 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATTTGTCATAGTCGGTTTCGTGACCCT < 41bp 1 0.454370590059066 1 0.588920533657074 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131847002 synonymous SNV . 0 24 hm5C_associated_SNPs_38468 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:131846968-131847009
64251 chr12 31244682 31244682 1 + G T STAD 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTTCATGCGGCCACTCGGCAGGCCGCGG < 41bp 1 0.559649946924151 1 0.270456552505493 experiment 0.880700106151699 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244682 synonymous SNV . 0 16 hm5C_associated_SNPs_38469 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr12 31244682 31244682 1 + G T STAD 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTTCATGCGGCCACTCGGCAGGCCGCGGGCAT < 41bp 1 0.194383572681477 1 0.0303165018558502 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244682 synonymous SNV . 0 12 hm5C_associated_SNPs_38470 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr4 126398337 126398337 1 + T A STAD 126398352 + 126398332 126398372 41 AGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT AGAGTAACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT < 41bp 1 0.149611842195341 1 0.83440774679184 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126398352 chr4:126398337 synonymous SNV . 0 6 hm5C_associated_SNPs_38471 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126398320-126398340
64251 chr16 722946 722946 1 + C A STAD 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACATGGACGGGAAGACCCCCTGCCTCTTTGTCTCCTC < 41bp 1 0.395310290842991 1 0.0641034245491028 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722946 nonsynonymous SNV 0.984 0 16 hm5C_associated_SNPs_38472 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chrX 73047029 73047029 1 - A G STAD 73047047 - 73047027 73047067 41 TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCCGC < 41bp 1 0.116515373250433 1 0.117410093545914 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047047 chrX:73047029 . . 0 39 hm5C_associated_SNPs_38483 0 0 93 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047020-73047040
64251 chr6 28329219 28329219 1 + C A STAD 28329230 + 28329210 28329250 41 AGCATGAATCTGTGGGATCCCAGCCTTTACAAGATAGAGGT AGCATGAATATGTGGGATCCCAGCCTTTACAAGATAGAGGT < 41bp 1 0.469544814929815 1 0.370745182037354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28329230 chr6:28329219 nonsynonymous SNV 0.716 2 10 hm5C_associated_SNPs_38484 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:28329212-28329232
64251 chr6 26598840 26598840 1 + C T STAD 26598851 + 26598831 26598871 41 CTCAGAGAGCATGGAGGGACCTTCCCTTGTCAGGGACTCCT CTCAGAGAGTATGGAGGGACCTTCCCTTGTCAGGGACTCCT < 41bp 1 0.296892655020194 1 0.0416096448898315 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598851 chr6:26598840 synonymous SNV . 0 10 hm5C_associated_SNPs_38485 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr5 149754318 149754318 1 + G A STAD 149754323 + 149754303 149754343 41 GCGGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGA GCGGGGAAGCGGGAGAAGGACTCGCAGAGCAGCAGCGAGGA < 41bp 1 0.571417169566566 1 0.310339391231537 experiment 0.857165660866869 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754323 chr5:149754318 nonsynonymous SNV 0.001 0 16 hm5C_associated_SNPs_38486 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754318 149754318 1 + G A STAD 149754325 + 149754305 149754345 41 GGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGAAT GGGGAAGCGGGAGAAGGACTCGCAGAGCAGCAGCGAGGAAT < 41bp 1 0.644720881699992 1 0.507859885692596 experiment 0.710558236600016 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754325 chr5:149754318 nonsynonymous SNV 0.001 0 14 hm5C_associated_SNPs_38487 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754318 149754318 1 + G A STAD 149754335 + 149754315 149754355 41 GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA GAGAAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA < 41bp 1 0.519460183543047 1 0.272040516138077 experiment 0.961079632913906 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754335 chr5:149754318 nonsynonymous SNV 0.001 0 4 hm5C_associated_SNPs_38488 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr3 47361166 47361166 1 + C T STAD 47361152 + 47361132 47361172 41 TTTGCCCACAGATTGGGGACCACAAATTCAGTGCCCACCGG TTTGCCCACAGATTGGGGACCACAAATTCAGTGCTCACCGG < 41bp 1 0.524321146724067 1 0.327611416578293 experiment 0.951357706551865 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361152 chr3:47361166 synonymous SNV . 0 35 hm5C_associated_SNPs_38489 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:47361154-47361188
64251 chr5 10254907 10254907 1 + G C STAD 10254899 + 10254879 10254919 41 TTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGAT TTGCCAAGCTGATGGTGGAACTGTCCAACTCTCAGGATGAT < 41bp 1 0.130287275471439 1 0.0695640444755554 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753;ENSG00000150753 exonic;splicing Human other chr5:10254899 chr5:10254907 nonsynonymous SNV 0.999 2 29 hm5C_associated_SNPs_38490 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254907 10254907 1 + G C STAD 10254903 + 10254883 10254923 41 CAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAA CAAGCTGATGGTGGAACTGTCCAACTCTCAGGATGATGAAA < 41bp 1 0.0946621568719132 1 0.0474712252616882 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753;ENSG00000150753 exonic;splicing Human other chr5:10254903 chr5:10254907 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_38491 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr5 10254907 10254907 1 + G C STAD 10254909 + 10254889 10254929 41 GATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAG GATGGTGGAACTGTCCAACTCTCAGGATGATGAAATTGGAG < 41bp 1 0.628135977588872 1 0.34593066573143 experiment 0.743728044822256 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT5 ENSG00000150753;ENSG00000150753 exonic;splicing Human other chr5:10254909 chr5:10254907 nonsynonymous SNV 0.999 2 19 hm5C_associated_SNPs_38492 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr2 102441785 102441785 1 + T G STAD 102441795 + 102441775 102441815 41 CTATAGCTTGTTATGGAGTTCTGTGGGGCTGGGTCCATTAC CTATAGCTTGGTATGGAGTTCTGTGGGGCTGGGTCCATTAC < 41bp 1 0.389825702674463 1 0.143114805221558 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102441795 chr2:102441785 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_38493 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr2:102441780-102441800
64251 chr1 214819436 214819436 1 + C A STAD 214819453 + 214819433 214819473 41 ATTCTTGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT ATTATTGATGCCGAGAATTCCAAAGCAGAAGTAGAGACTCT < 41bp 1 0.261715008616237 1 0.633350729942322 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214819453 chr1:214819436 nonsynonymous SNV 0.999 2 4 hm5C_associated_SNPs_38494 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214819343-214819493
64251 chr5 68692326 68692326 1 + A C STAD 68692324 + 68692304 68692344 41 TCATTGCCAAGGAGGAGGATCAAGTTTTCGACCCTTGCACA TCATTGCCAAGGAGGAGGATCACGTTTTCGACCCTTGCACA < 41bp 1 0.729589927582957 1 0.338299751281738 experiment 0.540820144834087 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD17 ENSG00000152942 CDS Human protein_coding chr5:68692324 chr5:68692326 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_38495 0 0 1 PPIG POSTAR2 ENCODE chr5:68692314-68692366
64251 chr20 35857032 35857032 1 + A C STAD 35857050 + 35857030 35857070 41 CAAGTTTGAACTGGATACCTCTGAAAGAAAGATTGAATTTG CACGTTTGAACTGGATACCTCTGAAAGAAAGATTGAATTTG < 41bp 1 0.604397333812745 1 0.39544203877449 experiment 0.791205332374511 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35857050 chr20:35857032 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_38496 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:35857020-35857040
64251 chr16 23578341 23578341 1 + A C STAD 23578358 + 23578338 23578378 41 TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC TAACAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC < 41bp 1 0.0724021704920738 1 0.0829088389873505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23578358 chr16:23578341 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_38497 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:23578290-23578386
64251 chr1 70700393 70700393 1 + A G STAD 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CGCTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT < 41bp 1 0.322363253738931 1 0.126441150903702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700393 synonymous SNV . 0 2 hm5C_associated_SNPs_38498 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:70700376-70700412
64251 chr1 7796536 7796536 1 + A C STAD 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCGGAATGCCCCTACTCCACCTGGCCGCTGCCCAGGG < 41bp 1 0.309839056754553 1 0.388527274131775 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796536 nonsynonymous SNV 0.990 4 13 hm5C_associated_SNPs_38499 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:7796533-7796565
64251 chr4 79437061 79437061 1 + T C STAD 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGCGTGCGAGAGCCGAAGACCATCCAGCCCTACAAACACCT < 41bp 1 0.0555501130460932 1 0.393047630786896 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437061 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_38500 0 0 2 SND1 POSTAR2 ENCODE chr4:79437023-79437063
64251 chr15 43484948 43484948 1 + G T STAD 43484957 + 43484937 43484977 41 TTAGTGTGGATGATTTGGCTCTGAGCATATATCCACCTATG TTAGTGTGGATTATTTGGCTCTGAGCATATATCCACCTATG < 41bp 1 0.537151074996925 1 0.126489460468292 experiment 0.925697850006149 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43484957 chr15:43484948 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_38501 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:43484934-43484962
64251 chr10 60037071 60037071 1 + A G STAD 60037076 + 60037056 60037096 41 TACTGCCGTTGTTGGAGGTCCAAAAAGGTGAGGAAAGCAAT TACTGCCGTTGTTGGGGGTCCAAAAAGGTGAGGAAAGCAAT < 41bp 1 0.60684337035211 1 0.408981829881668 experiment 0.786313259295779 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CISD1 ENSG00000122873 CDS Human protein_coding chr10:60037076 chr10:60037071 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_38505 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:60037055-60037082
64251 chr12 71977612 71977612 1 + G A STAD 71977616 + 71977596 71977636 41 GAACATGCTCACGGGAGTCTCCAGTGCCGTGCTGGCTGGTG GAACATGCTCACGGGAATCTCCAGTGCCGTGCTGGCTGGTG < 41bp 1 0.455299447558409 1 0.664390444755554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977616 chr12:71977612 nonsynonymous SNV 0.002 1 17 hm5C_associated_SNPs_38506 0 0 2 RPS3 POSTAR2 ENCODE chr12:71977579-71977616
64251 chr20 36149740 36149740 1 - G A STAD 36149743 - 36149723 36149763 41 TTCAGCCGAGGCCGCCGCCACTGCCGCCATGGTTCCAAGAA TTCAGCCGAGGCCGCCGCCACTGTCGCCATGGTTCCAAGAA < 41bp 1 0.26393677171855 1 0.152227014303207 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149743 chr20:36149740 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_38507 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr20 36149740 36149740 1 - G A STAD 36149745 - 36149725 36149765 41 AGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGTTCCAAG AGTTCAGCCGAGGCCGCCGCCACTGTCGCCATGGTTCCAAG < 41bp 1 0.501976554931873 1 0.415088057518005 experiment 0.996046890136254 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149745 chr20:36149740 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_38508 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr20 36149740 36149740 1 - G A STAD 36149746 - 36149726 36149766 41 CAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGTTCCAA CAGTTCAGCCGAGGCCGCCGCCACTGTCGCCATGGTTCCAA < 41bp 1 0.2813530620623 1 0.0954544842243195 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149746 chr20:36149740 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_38509 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr20 36149740 36149740 1 - G A STAD 36149748 - 36149728 36149768 41 AGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGTTCC AGCAGTTCAGCCGAGGCCGCCGCCACTGTCGCCATGGTTCC < 41bp 1 0.594470526607304 1 0.25243067741394 experiment 0.811058946785392 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149748 chr20:36149740 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_38510 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr20 36149740 36149740 1 - G A STAD 36149751 - 36149731 36149771 41 ATGAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGGT ATGAGCAGTTCAGCCGAGGCCGCCGCCACTGTCGCCATGGT < 41bp 1 0.578018626380225 1 0.474822461605072 experiment 0.84396274723955 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149751 chr20:36149740 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_38511 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr20 36149740 36149740 1 - G A STAD 36149752 - 36149732 36149772 41 GATGAGCAGTTCAGCCGAGGCCGCCGCCACTGCCGCCATGG GATGAGCAGTTCAGCCGAGGCCGCCGCCACTGTCGCCATGG < 41bp 1 0.280031402830048 1 0.15801864862442 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NNAT ENSG00000053438 CDS Human protein_coding chr20:36149752 chr20:36149740 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_38512 0 0 1 SFPQ POSTAR2 ENCODE chr20:36149591-36149758
64251 chr1 163310207 163310207 1 + C T STAD 163310211 + 163310191 163310231 41 ATATTTCAGAGAAAACCAAGCGTTTGGTAAACATCTTTTCT ATATTTCAGAGAAAACTAAGCGTTTGGTAAACATCTTTTCT < 41bp 1 0.0755122088253794 1 0.0872383117675781 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163310211 chr1:163310207 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_38513 0 0 2 BUD13 POSTAR2 ENCODE chr1:163310194-163310211
64251 chr1 11894557 11894557 1 + G A STAD 11894546 + 11894526 11894566 41 TGCTTTGTGTTTCAGGTGGCCAAATGGACAGGGGACTTTTT TGCTTTGTGTTTCAGGTGGCCAAATGGACAGAGGACTTTTT < 41bp 1 0.101594801725671 1 0.805831372737885 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11894546 chr1:11894557 nonsynonymous SNV 0.976 5 32 hm5C_associated_SNPs_38514 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:11894554-11894576
64251 chr17 80529613 80529613 1 + C T STAD 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG TGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG < 41bp 1 0.0862406688951919 1 0.0618610680103302 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529613 nonsynonymous SNV 0.952 5 1 hm5C_associated_SNPs_38515 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:80529603-80529627
64251 chr22 29695771 29695771 1 + C G STAD 29695781 + 29695761 29695801 41 CCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAG CCCTGGGGGGGCCCCTGGACCTTTGATGGAACAGATGGGAG < 41bp 1 0.457867017759768 1 0.364406079053879 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695781 chr22:29695771 nonsynonymous SNV 0.985 2 11 hm5C_associated_SNPs_38516 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr19 41265406 41265406 1 + G A STAD 41265404 + 41265384 41265424 41 GGCACCTTCGTGGAGCGGGACCGCAAGCGGGAGAAGAGGAA GGCACCTTCGTGGAGCGGGACCACAAGCGGGAGAAGAGGAA < 41bp 1 0.296243477709406 1 0.0601604282855988 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRPA ENSG00000077312 CDS Human protein_coding chr19:41265404 chr19:41265406 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_38518 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:41265341-41265407
64251 chr16 31131803 31131803 1 + C T STAD 31131787 + 31131767 31131807 41 GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGCGCAA GAGCAGCCTGAGCGCAAGATCACTCGCAACCAAAAGTGCAA < 41bp 1 0.243940515246728 1 0.0652007162570953 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131787 chr16:31131803 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_38520 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr16:31131799-31131812
64251 chr13 73327858 73327858 1 + G T STAD 73327849 + 73327829 73327869 41 TGGATAGTGGCTATAATACGCAGAATTGTGGAAGCAATATT TGGATAGTGGCTATAATACGCAGAATTGTTGAAGCAATATT < 41bp 1 0.577146206074956 1 0.130265653133392 experiment 0.845707587850088 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BORA ENSG00000136122 CDS Human protein_coding chr13:73327849 chr13:73327858 stopgain 0.976 1 30 hm5C_associated_SNPs_38521 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr13:73327825-73327863
64251 chr19 41077990 41077990 1 + G T STAD 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GGACTCCAAGGTCCCGGCATCCGGGAGCACACACGGTGGGG < 41bp 1 0.323750210656794 1 0.858221411705017 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41077990 nonsynonymous SNV 0.692 1 12 hm5C_associated_SNPs_38523 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr20 34832803 34832803 1 + C T STAD 34832788 + 34832768 34832808 41 TACCACCAGCTTGGTGAGATCCCCGCTGACTTCTTCGTAGA TACCACCAGCTTGGTGAGATCCCCGCTGACTTCTTTGTAGA < 41bp 1 0.36608173849349 1 0.514399707317352 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control AAR2 ENSG00000131043 CDS Human protein_coding chr20:34832788 chr20:34832803 synonymous SNV . 0 36 hm5C_associated_SNPs_38524 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:34832788-34832805
64251 chr1 82372819 82372819 1 + A G STAD 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTGTGGTCGGACGGATGACAAGATTTGT < 41bp 1 0.285689310414939 1 0.76971447467804 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372819 nonsynonymous SNV 0.918 4 16 hm5C_associated_SNPs_38525 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr19 50548314 50548314 1 + G A STAD 50548302 + 50548282 50548322 41 CGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAAC CGACCACAGCCAGCAGGATTCTGTTCAGGAAGAGGAGAAAC < 41bp 1 0.31231084094816 1 0.0775163471698761 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548302 chr19:50548314 nonsynonymous SNV 0.009 0 33 hm5C_associated_SNPs_38526 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:50548295-50548323
64251 chr5 71495207 71495207 1 + G T STAD 71495192 + 71495172 71495212 41 GTGGCCACACACTTGGGGACCCCAGCTACTCTTATGAAACC GTGGCCACACACTTGGGGACCCCAGCTACTCTTATTAAACC < 41bp 1 0.0826056072314073 1 0.182753622531891 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495192 chr5:71495207 stopgain 0.994 1 36 hm5C_associated_SNPs_38528 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71495089-71495441
64251 chr20 32660008 32660008 1 + C T STAD 32660003 + 32659983 32660023 41 AAATCAGATGTGGAGACCATCTTCTCTAAGTATGGCCGTGT AAATCAGATGTGGAGACCATCTTCTTTAAGTATGGCCGTGT < 41bp 1 0.223948767344769 1 0.0772636830806732 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32660003 chr20:32660008 nonsynonymous SNV 0.998 4 26 hm5C_associated_SNPs_38529 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32659982-32660012
64251 chr18 56587298 56587298 1 + A G STAD 56587286 + 56587266 56587306 41 GCTTTCAACAAGGTGCTGAGCAGTGTCAATCCAGTCCCTGT GCTTTCAACAAGGTGCTGAGCAGTGTCAATCCGGTCCCTGT < 41bp 1 0.437565054401496 1 0.0951889157295227 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF532 ENSG00000074657 CDS Human protein_coding chr18:56587286 chr18:56587298 synonymous SNV . 0 33 hm5C_associated_SNPs_38530 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:56587290-56587337
64251 chr7 45688316 45688316 1 + C T STAD 45688321 + 45688301 45688341 41 GGACTGCTACTACTGCGTGTCGGGCCTCACCCAGCCCAAGA GGACTGCTACTACTGTGTGTCGGGCCTCACCCAGCCCAAGA < 41bp 1 0.478721309118045 1 0.917625546455383 experiment 1 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45688321 chr7:45688316 synonymous SNV . 0 16 hm5C_associated_SNPs_38531 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:45688292-45688319
64251 chr6 26124540 26124540 1 + C T STAD 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCTGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA < 41bp 1 0.576138100022923 1 0.159576505422592 experiment 0.847723799954155 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124540 nonsynonymous SNV 0.444 4 5 hm5C_associated_SNPs_38532 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26124400-26124560
64251 chr8 110569190 110569190 1 + G T STAD 110569185 + 110569165 110569205 41 TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA TTGTTATTAAGAAGAGAGAACCATTTAATTTTGGCATCCCA < 41bp 1 0.0298427892199692 1 0.182155042886734 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569185 chr8:110569190 nonsynonymous SNV 0.996 1 26 hm5C_associated_SNPs_38533 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:110569167-110569190
64251 chr18 72344603 72344603 1 + T C STAD 72344610 + 72344590 72344630 41 AATAGGACAGATTTGGAAATCCATGTGAAAAGGTGCCATGC AATAGGACAGATTCGGAAATCCATGTGAAAAGGTGCCATGC < 41bp 1 0.16180294235395 1 0.329249322414398 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72344610 chr18:72344603 nonsynonymous SNV 0.004 1 14 hm5C_associated_SNPs_38534 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr18:72344584-72344604
64251 chr19 50881883 50881883 1 + T C STAD 50881902 + 50881882 50881922 41 CTCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG CCCAGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGG < 41bp 1 0.0876900509780937 1 0.0848948955535889 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881902 chr19:50881883 nonsynonymous SNV 0.526 1 2 hm5C_associated_SNPs_38535 0 0 6 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr15 89172603 89172603 1 + G A STAD 89172606 + 89172586 89172626 41 CCCGGCCTCCACACCCGGGCCCGGGTCTCTCTAAAGGACCT CCCGGCCTCCACACCCGAGCCCGGGTCTCTCTAAAGGACCT < 41bp 1 0.492801667447392 1 0.345205962657928 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AEN ENSG00000181026 CDS Human protein_coding chr15:89172606 chr15:89172603 synonymous SNV . 0 18 hm5C_associated_SNPs_38537 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr15:89172570-89172618
64251 chr5 65105422 65105422 1 + G A STAD 65105431 + 65105411 65105451 41 GAAAATTGGGTGTGGGACGTCGATTCCCTCCGAAGATTGTC GAAAATTGGGTATGGGACGTCGATTCCCTCCGAAGATTGTC < 41bp 1 0.098385509193709 1 0.191223442554474 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65105431 chr5:65105422 synonymous SNV . 0 12 hm5C_associated_SNPs_38538 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:65105407-65105429
64251 chr1 24083515 24083515 1 + T C STAD 24083522 + 24083502 24083542 41 TTAACCCCAGCCCTGAGGAGCCGGCCTATGATGGCCCAAGC TTAACCCCAGCCCCGAGGAGCCGGCCTATGATGGCCCAAGC < 41bp 1 0.224186181436461 1 0.690634608268738 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ELOA ENSG00000011007 CDS Human protein_coding chr1:24083522 chr1:24083515 synonymous SNV . 0 14 hm5C_associated_SNPs_38539 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:24083480-24083516
64251 chr11 65269106 65269106 1 + A G STAD 65269086 + 65269066 65269106 41 GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTA GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTG < 41bp 1 0.724856510315397 1 0.482103854417801 experiment 0.550286979369206 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269086 chr11:65269106 . . 0 41 hm5C_associated_SNPs_38540 0 0 118 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269106 65269106 1 + A G STAD 65269107 + 65269087 65269127 41 TGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAA TGGGTTAGAGAAGGAGTGTGCCGCTGTGCTGTTGGCACGAA < 41bp 1 0.504308314422083 1 0.300077348947525 experiment 0.991383371155833 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269107 chr11:65269106 . . 0 20 hm5C_associated_SNPs_38541 0 0 118 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269106 65269106 1 + A G STAD 65269110 + 65269090 65269130 41 GTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACAC GTTAGAGAAGGAGTGTGCCGCTGTGCTGTTGGCACGAACAC < 41bp 1 0.481184387114151 1 0.288647383451462 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269110 chr11:65269106 . . 0 17 hm5C_associated_SNPs_38542 0 0 118 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr11 65269106 65269106 1 + A G STAD 65269115 + 65269095 65269135 41 AGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCA AGAAGGAGTGTGCCGCTGTGCTGTTGGCACGAACACCTTCA < 41bp 1 0.385104112249681 1 0.147583216428757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269115 chr11:65269106 . . 0 12 hm5C_associated_SNPs_38543 0 0 118 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65269100-65269120
64251 chr10 105174906 105174906 1 + C T STAD 105174899 + 105174879 105174919 41 TACCACATCGGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT TACCACATCGGGGATGAGGTCAAGTGCTGGGTGAGCCTCCT < 41bp 1 0.464736090011421 1 0.754418551921844 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105174899 chr10:105174906 nonsynonymous SNV 0.986 4 28 hm5C_associated_SNPs_38545 0 0 4 FXR2 POSTAR2 ENCODE chr10:105174884-105174907
64251 chr19 36594075 36594075 1 + G T STAD 36594068 + 36594048 36594088 41 GTGCCTGCAGGTCCTCGCTGCAGGGAAGGCTGAAGAGACCC GTGCCTGCAGGTCCTCGCTGCAGGGAATGCTGAAGAGACCC < 41bp 1 0.551520586526459 1 0.896822929382324 experiment 0.896958826947081 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36594068 chr19:36594075 nonsynonymous SNV 0.022 1 28 hm5C_associated_SNPs_38546 0 0 1 SF3B4 POSTAR2 ENCODE chr19:36594058-36594109
64251 chr2 207174987 207174987 1 + C T STAD 207175003 + 207174983 207175023 41 GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA GTGGTCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA < 41bp 1 0.0366486272527182 1 0.0304323136806488 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175003 chr2:207174987 nonsynonymous SNV 0.888 1 5 hm5C_associated_SNPs_38547 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:207174980-207175000
64251 chr2 207174987 207174987 1 + C T STAD 207175004 + 207174984 207175024 41 TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG TGGTCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG < 41bp 1 0.259435905105005 1 0.0625672340393066 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175004 chr2:207174987 nonsynonymous SNV 0.888 1 4 hm5C_associated_SNPs_38548 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:207174980-207175000
64251 chr18 19209067 19209067 1 + C T STAD 19209061 + 19209041 19209081 41 GAAGAGGAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGA GAAGAGGAAGAGGAAGAGGACGTGGCTGTGGCAGAGGAAGA < 41bp 1 0.67353291638633 1 0.413208693265915 experiment 0.652934167227341 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209061 chr18:19209067 nonsynonymous SNV 0.998 4 27 hm5C_associated_SNPs_38549 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr22 39826095 39826095 1 + C A STAD 39826113 + 39826093 39826133 41 CTCTTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA CTATTCCGCTCCCGGCCCGCCCACTCGCTCCCGCCTGGCGA < 41bp 1 0.0935544226861947 1 0.172200232744217 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39826113 chr22:39826095 synonymous SNV . 0 3 hm5C_associated_SNPs_38552 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39826073-39826124
64251 chr14 73637541 73637541 1 + C T STAD 73637529 + 73637509 73637549 41 ACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT ACAATAGAGAACGGCAGGAGCACAACGACAGATGGAGCCTT < 41bp 1 0.657201027757267 1 0.274886548519135 experiment 0.685597944485467 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637529 chr14:73637541 nonsynonymous SNV 0.044 3 33 hm5C_associated_SNPs_38553 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:73637532-73637565
64251 chr14 73637541 73637541 1 + C T STAD 73637531 + 73637511 73637551 41 AATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG AATAGAGAACGGCAGGAGCACAACGACAGATGGAGCCTTGG < 41bp 1 0.566314493419099 1 0.257904201745987 experiment 0.867371013161801 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637531 chr14:73637541 nonsynonymous SNV 0.044 3 31 hm5C_associated_SNPs_38554 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:73637532-73637565
64251 chr10 103919311 103919311 1 + T C STAD 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCACGAAAAAT < 41bp 1 0.535443845433656 1 0.50555157661438 experiment 0.929112309132688 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919311 nonsynonymous SNV 0.719 0 34 hm5C_associated_SNPs_38555 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:103919264-103919312
64251 chr7 138944044 138944044 1 + T C STAD 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TTGAGACGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG < 41bp 1 0.535496567583142 1 0.685847640037537 experiment 0.929006864833716 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944044 nonsynonymous SNV 0.994 0 7 hm5C_associated_SNPs_38556 0 0 11 AARS POSTAR2 ENCODE chr7:138944021-138944110
64251 chr20 47641885 47641885 1 + G A STAD 47641892 + 47641872 47641912 41 TCCACATAGAGACGGAGGATCAGGGCATGTATAAGTACATG TCCACATAGAGACAGAGGATCAGGGCATGTATAAGTACATG < 41bp 1 0.512917559081821 1 0.80031430721283 experiment 0.974164881836357 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47641892 chr20:47641885 synonymous SNV . 0 14 hm5C_associated_SNPs_38562 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:47641869-47641892
64251 chr22 38313789 38313789 1 + A G STAD 38313800 + 38313780 38313820 41 TGGAACCAGAAGATGTGGCTCAGGTAGGCAGATACCTGGAG TGGAACCAGGAGATGTGGCTCAGGTAGGCAGATACCTGGAG < 41bp 1 0.635114428192153 1 0.594373106956482 experiment 0.729771143615695 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MICALL1 ENSG00000100139 CDS Human protein_coding chr22:38313800 chr22:38313789 nonsynonymous SNV 0.205 0 10 hm5C_associated_SNPs_38563 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:38313758-38313794
64251 chr5 139917038 139917038 1 + A G STAD 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATGCCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC < 41bp 1 0.318053177888235 1 0.587997436523438 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917038 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_38564 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:139917021-139917046
64251 chr1 220279329 220279329 1 + C T STAD 220279315 + 220279295 220279335 41 TTACCTGCAAATCATGTGACCATGGCAAAAGGAACGGGATT TTACCTGCAAATCATGTGACCATGGCAAAAGGAATGGGATT < 41bp 1 0.196565976701289 1 0.316762089729309 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IARS2 ENSG00000067704 CDS Human protein_coding chr1:220279315 chr1:220279329 nonsynonymous SNV 0.999 3 35 hm5C_associated_SNPs_38565 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:220279326-220279346
64251 chr6 35438046 35438046 1 + T C STAD 35438048 + 35438028 35438068 41 TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAAC TAAATAAGGCAGGAAAGTCCCCTTCCCTGCTCACACACAAC < 41bp 1 0.0280311671015256 1 0.154522955417633 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438048 chr6:35438046 nonsynonymous SNV 0.995 2 19 hm5C_associated_SNPs_38566 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:35438002-35438069
64251 chr17 80544048 80544048 1 + G T STAD 80544032 + 80544012 80544052 41 GGCAGCCGTGCTGGCCCCTCCTAAGGCAGAGGCCCAGGAGA GGCAGCCGTGCTGGCCCCTCCTAAGGCAGAGGCCCATGAGA < 41bp 1 0.395443272111599 1 0.690102100372314 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544032 chr17:80544048 nonsynonymous SNV 0.633 2 37 hm5C_associated_SNPs_38567 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:80544040-80544060
64251 chr6 43143586 43143586 1 + C T STAD 43143566 + 43143546 43143586 41 CCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTCTGC CCCTCCTTTCCCATCACCAACTACCTGGCACCAGTGTCTGT < 41bp 1 0.150021115109361 1 0.0646924674510956 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SRF ENSG00000112658 CDS Human protein_coding chr6:43143566 chr6:43143586 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_38568 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43143577-43143635
64251 chr16 601525 601525 1 + C T STAD 601540 + 601520 601560 41 GGCTCCGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC GGCTCTGAAACCCGTGGGGCCGTTTCTCCTGGAACGGCAGC < 41bp 1 0.0299451332706042 1 0.0626651346683502 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:601540 chr16:601525 stopgain 0.990 1 6 hm5C_associated_SNPs_38570 0 0 1 PPIG POSTAR2 ENCODE chr16:601514-601525
64251 chr19 36213584 36213584 1 + C A STAD 36213602 + 36213582 36213622 41 CCCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGAGGGT CCATCCCTCTCCGGGATCGGCAGGACCTCGCCACAGAGGGT < 41bp 1 0.502165996788473 1 0.655506193637848 experiment 0.995668006423053 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36213602 chr19:36213584 nonsynonymous SNV 0.995 4 3 hm5C_associated_SNPs_38571 0 0 4 FBL POSTAR2 GSE43666,GSM1067865 chr19:36213564-36213597
64251 chr7 30673476 30673476 1 + A C STAD 30673480 + 30673460 30673500 41 AGACAATCGAGGAATGAGGACAATTTTGACAACTTTTGACC AGACAATCGAGGAATGCGGACAATTTTGACAACTTTTGACC < 41bp 1 0.160411795190336 1 0.0811029672622681 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30673480 chr7:30673476 stoploss 0.700 0 17 hm5C_associated_SNPs_38572 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30673469-30673497
64251 chr11 117152365 117152365 1 + G A STAD 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAACAGCCT < 41bp 1 0.522050198430597 1 0.486700862646103 experiment 0.955899603138805 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152365 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_38573 0 0 1 DDX24 POSTAR2 ENCODE chr11:117152355-117152393
64251 chr18 21508172 21508172 1 + G T STAD 21508167 + 21508147 21508187 41 TGTCGTTAGATTGAATGATACTGTGGGAGTAACCAAAAAGT TGTCGTTAGATTGAATGATACTGTGTGAGTAACCAAAAAGT < 41bp 1 0.118509129020286 1 0.181551098823547 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21508167 chr18:21508172 stopgain 0.994 0 26 hm5C_associated_SNPs_38575 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:21508153-21508191
64251 chr18 21508172 21508172 1 + G T STAD 21508180 + 21508160 21508200 41 AATGATACTGTGGGAGTAACCAAAAAGTGCTCGGAAGACTG AATGATACTGTGTGAGTAACCAAAAAGTGCTCGGAAGACTG < 41bp 1 0.391878890252225 1 0.414385735988617 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21508180 chr18:21508172 stopgain 0.994 0 13 hm5C_associated_SNPs_38576 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:21508153-21508191
64251 chr20 31021453 31021453 1 + G C STAD 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGACTCT < 41bp 1 0.562595189968833 1 0.131697177886963 experiment 0.874809620062333 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021453 nonsynonymous SNV 0.001 1 38 hm5C_associated_SNPs_38578 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr20:31021448-31021469
64251 chr20 31021453 31021453 1 + G C STAD 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGACTCTG < 41bp 1 0.549461828668014 1 0.401122808456421 experiment 0.901076342663973 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021453 nonsynonymous SNV 0.001 1 37 hm5C_associated_SNPs_38579 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr20:31021448-31021469
64251 chr20 31021453 31021453 1 + G C STAD 31021472 + 31021452 31021492 41 AGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTG ACTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTG < 41bp 1 0.654865103861393 1 0.500840485095978 experiment 0.690269792277215 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021472 chr20:31021453 nonsynonymous SNV 0.001 1 2 hm5C_associated_SNPs_38580 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr20:31021448-31021469
64251 chr9 106874035 106874035 1 + T C STAD 106874053 + 106874033 106874073 41 CTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA CTCGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA < 41bp 1 0.376992392596995 1 0.376161694526672 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106874053 chr9:106874035 synonymous SNV . 0 3 hm5C_associated_SNPs_38581 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:106873999-106874037
64251 chr19 18966037 18966037 1 + C T STAD 18966036 + 18966016 18966056 41 CACCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGG CACCATCGTCTACCACCTGGCTCGGCAAGGCAACGGGTAGG < 41bp 1 0.435199115329734 1 0.11017319560051 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966036 chr19:18966037 synonymous SNV . 0 22 hm5C_associated_SNPs_38582 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:18966014-18966039
64251 chr19 18966037 18966037 1 + C T STAD 18966038 + 18966018 18966058 41 CCATCGTCTACCACCTGGCCCGGCAAGGCAACGGGTAGGGC CCATCGTCTACCACCTGGCTCGGCAAGGCAACGGGTAGGGC < 41bp 1 0.641684321735343 1 0.199085533618927 experiment 0.716631356529314 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18966038 chr19:18966037 synonymous SNV . 0 20 hm5C_associated_SNPs_38583 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:18966014-18966039
64251 chr12 94562997 94562997 1 + A T STAD 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACTTCCGTTTATGGCACCGTGGTAAT < 41bp 1 0.0615435883157767 1 0.0667796432971954 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94562997 synonymous SNV . 0 18 hm5C_associated_SNPs_38584 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr9 35792588 35792588 1 + C T STAD 35792598 + 35792578 35792618 41 GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG GGGCACTGCCTGTGGACCTGCGGTTTGTCAGCTCCGAACTG < 41bp 1 0.550321119936999 1 0.425009429454803 experiment 0.899357760126002 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792598 chr9:35792588 synonymous SNV . 0 11 hm5C_associated_SNPs_38585 0 0 2 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr6 31605358 31605358 1 + C T STAD 31605371 + 31605351 31605391 41 CCCACCCCGCTGAGGGAGTTCCTCTTGCCCCCTACCCCCGG CCCACCCTGCTGAGGGAGTTCCTCTTGCCCCCTACCCCCGG < 41bp 1 0.216507202703784 1 0.234406769275665 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31605371 chr6:31605358 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_38586 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31605332-31605359
64251 chr17 36508871 36508871 1 + G T STAD 36508864 + 36508844 36508884 41 AGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAG AGAGCTGGCTGCTTCAGCTGCGAGCCTTACAGACATGGGAG < 41bp 1 0.426169313664152 1 0.502792418003082 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508864 chr17:36508871 synonymous SNV . 0 28 hm5C_associated_SNPs_38587 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:36508852-36508872
64251 chr17 36508871 36508871 1 + G T STAD 36508869 + 36508849 36508889 41 TGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAGGCTCT TGGCTGCTTCAGCTGCGAGCCTTACAGACATGGGAGGCTCT < 41bp 1 0.0366825376971863 1 0.0882514119148254 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508869 chr17:36508871 synonymous SNV . 0 23 hm5C_associated_SNPs_38588 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:36508852-36508872
64251 chr19 36218419 36218419 1 + C T STAD 36218408 + 36218388 36218428 41 CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCCGCTGGCGAG CTGCGGACCGTGTGCTGGGGCAGCGCAGCCCTGCTGGCGAG < 41bp 1 0.613332172532549 1 0.444473117589951 experiment 0.773335654934901 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36218408 chr19:36218419 nonsynonymous SNV 0.959 5 32 hm5C_associated_SNPs_38589 0 0 2 GRWD1 POSTAR2 ENCODE chr19:36218346-36218420
64251 chr19 41307126 41307126 1 + G A STAD 41307114 + 41307094 41307134 41 TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTGGGCGCCTG TGCTGGCCGAGGTGGAGGCCCTCAAACGGGGTAGGCGCCTG < 41bp 1 0.788071535435111 1 0.884400010108948 experiment 0.423856929129778 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41307114 chr19:41307126 nonsynonymous SNV 0.992 4 33 hm5C_associated_SNPs_38590 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:41307117-41307154
64251 chr3 119205779 119205779 1 + A C STAD 119205764 + 119205744 119205784 41 GAATACACCAAAAACCAGGCCTGGAAATCTATGAAAGTAAT GAATACACCAAAAACCAGGCCTGGAAATCTATGAACGTAAT < 41bp 1 0.676070175961301 1 0.137391656637192 experiment 0.647859648077399 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119205764 chr3:119205779 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_38591 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119205680-119205826
64251 chr3 184021842 184021842 1 + G A STAD 184021833 + 184021813 184021853 41 GACTATGTTCTCCACAACAGCAACACCATGAGACTTGGTTC GACTATGTTCTCCACAACAGCAACACCATAAGACTTGGTTC < 41bp 1 0.581256487040605 1 0.426441550254822 experiment 0.837487025918791 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD2 ENSG00000175166 CDS Human protein_coding chr3:184021833 chr3:184021842 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_38592 0 0 2 BUD13 POSTAR2 ENCODE chr3:184021788-184021849
64251 chr19 52195895 52195895 1 + G C STAD 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGGCACCCACCCGTAGAACCGACCTTGCGGGCCCTTCGC < 41bp 1 0.301690279001533 1 0.207663804292679 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195882 chr19:52195895 . . 0 34 hm5C_associated_SNPs_38593 0 0 5 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195895 52195895 1 + G C STAD 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGGCACCCACCCGTAGAACCGACCTTGCGGGCCCTTCGCC < 41bp 1 0.436508384015394 1 0.370754241943359 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195883 chr19:52195895 . . 0 33 hm5C_associated_SNPs_38594 0 0 5 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195895 52195895 1 + G C STAD 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGCCCTTCGCCGCA < 41bp 1 0.097518354812572 1 0.0184946060180664 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195895 . . 0 30 hm5C_associated_SNPs_38595 0 0 5 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195895 52195895 1 + G C STAD 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGCCCTTCGCCGCAC < 41bp 1 0.368997765043846 1 0.128837913274765 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195895 . . 0 29 hm5C_associated_SNPs_38596 0 0 5 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr6 150290471 150290471 1 + C T STAD 150290478 + 150290458 150290498 41 AATTTTTGATGTACTGGGAACAAATGCTGGATCCAACAAGT AATTTTTGATGTATTGGGAACAAATGCTGGATCCAACAAGT < 41bp 1 0.238777898167912 1 0.450637489557266 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ULBP1 ENSG00000111981 CDS Human protein_coding chr6:150290478 chr6:150290471 synonymous SNV . 0 14 hm5C_associated_SNPs_38597 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:150290464-150290479
64251 chr20 47895511 47895511 1 + T C STAD 47895499 + 47895479 47895519 41 TGGTGTAAATGATGACTTCACTTTTTTCCCCATCAGATCGA TGGTGTAAATGATGACTTCACTTTTTTCCCCACCAGATCGA < 41bp 1 0.112320614637035 1 0.043287605047226 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895499 chr20:47895511 . . 0 33 hm5C_associated_SNPs_38598 0 0 84 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr20 47895511 47895511 1 + T C STAD 47895509 + 47895489 47895529 41 GATGACTTCACTTTTTTCCCCATCAGATCGACAATGCTGAC GATGACTTCACTTTTTTCCCCACCAGATCGACAATGCTGAC < 41bp 1 0.562702116511849 1 0.126337140798569 experiment 0.874595766976303 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895509 chr20:47895511 . . 0 23 hm5C_associated_SNPs_38599 0 0 84 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr20 47895511 47895511 1 + T C STAD 47895529 + 47895509 47895549 41 CATCAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTA CACCAGATCGACAATGCTGACGTCTTATATTTTGCCAGTTA < 41bp 1 0.183920250647198 1 0.0546929538249969 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12C ENSG00000209042 ncRNA_exonic Human snoRNA chr20:47895529 chr20:47895511 . . 0 3 hm5C_associated_SNPs_38600 0 0 84 NOP58 POSTAR2 GSE43666,GSM1067861 chr20:47895460-47895540
64251 chr11 65827423 65827423 1 + G A STAD 65827410 + 65827390 65827430 41 CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGCCAGACT CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTACCAGACT < 41bp 1 0.152654948836797 1 0.0397890210151672 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827410 chr11:65827423 synonymous SNV . 0 34 hm5C_associated_SNPs_38602 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65827403-65827449
64251 chrX 73045197 73045197 1 - A G STAD 73045203 - 73045183 73045223 41 TGTGGATACAAAGAAAGGAGCAAGCATAAAAAAGTGCTCTT TGTGGATACAAAGAAAGGAGCAAGCACAAAAAAGTGCTCTT < 41bp 1 0.145513146346812 1 0.357937723398209 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045203 chrX:73045197 . . 0 27 hm5C_associated_SNPs_38610 0 0 46 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045197 73045197 1 - A G STAD 73045215 - 73045195 73045235 41 TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCACAA < 41bp 1 0.336625298314479 1 0.453033566474915 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045215 chrX:73045197 . . 0 39 hm5C_associated_SNPs_38611 0 0 46 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 92926147 92926147 1 + A T STAD 92926143 + 92926123 92926163 41 ATCTTTGTTTTGGATATAATCAGCAGGTAGTATTTAAGATC ATCTTTGTTTTGGATATAATCAGCTGGTAGTATTTAAGATC < 41bp 1 0.471865110628775 1 0.792846322059631 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS50 ENSG00000004766 CDS Human protein_coding chr7:92926143 chr7:92926147 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_38616 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:92926117-92926148
64251 chr3 132244996 132244996 1 + A G STAD 132245004 + 132244984 132245024 41 GCTGTGTGTTCGAGCCATGGCATCTTTAGAGACCATTGGCC GCTGTGTGTTCGGGCCATGGCATCTTTAGAGACCATTGGCC < 41bp 1 0.200708449632996 1 0.126541256904602 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DNAJC13 ENSG00000138246 CDS Human protein_coding chr3:132245004 chr3:132244996 synonymous SNV . 0 13 hm5C_associated_SNPs_38617 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:132244984-132245012
64251 chr11 1009100 1009100 1 + G A STAD 1009111 + 1009091 1009131 41 TGCTGGCAGGTATGGGGGCACCTTCCAGAACGTGTCTGTGC TGCTGGCAGATATGGGGGCACCTTCCAGAACGTGTCTGTGC < 41bp 1 0.0108049015303122 1 0.0408118069171906 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:1009111 chr11:1009100 synonymous SNV . 0 10 hm5C_associated_SNPs_38619 0 0 4 BUD13 POSTAR2 ENCODE chr11:1009073-1009135
64251 chr6 27101073 27101073 1 + A T STAD 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACTA < 41bp 1 0.55523331543453 1 0.56166410446167 experiment 0.889533369130939 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101073 stopgain 1.000 1 40 hm5C_associated_SNPs_38621 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101073 27101073 1 + A T STAD 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCGACAACTAGAAGACCC < 41bp 1 0.368209951976375 1 0.399787068367004 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101073 stopgain 1.000 1 32 hm5C_associated_SNPs_38622 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101073 27101073 1 + A T STAD 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGACAACTAGAAGACCCG < 41bp 1 0.340831447491489 1 0.151044368743896 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101073 stopgain 1.000 1 31 hm5C_associated_SNPs_38623 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr19 579629 579629 1 + C T STAD 579636 + 579616 579656 41 CTGAAGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAA CTGAAGGAGGACGTGCTGCCCGGCCAGAAAACGGAGTTCAA < 41bp 1 0.506107036691581 1 0.738250553607941 experiment 0.987785926616837 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579636 chr19:579629 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_38624 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr19 579629 579629 1 + C T STAD 579640 + 579620 579660 41 AGGAGGACGCGCTGCCCGGCCAGAAAACGGAGTTCAAGTGA AGGAGGACGTGCTGCCCGGCCAGAAAACGGAGTTCAAGTGA < 41bp 1 0.788856235596479 1 0.539587557315826 experiment 0.422287528807042 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:579640 chr19:579629 nonsynonymous SNV 0.000 0 10 hm5C_associated_SNPs_38625 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:579580-579640
64251 chr22 17590501 17590501 1 + T C STAD 17590500 + 17590480 17590520 41 CAGTCTGACCAGGGCTACATCTCCAGGAGCTCCCCGCAGCC CAGTCTGACCAGGGCTACATCCCCAGGAGCTCCCCGCAGCC < 41bp 1 0.606796627931758 1 0.615346491336823 experiment 0.786406744136485 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control IL17RA ENSG00000177663 CDS Human protein_coding chr22:17590500 chr22:17590501 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_38626 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:17590482-17590526
64251 chr16 87730240 87730240 1 + A G STAD 87730243 + 87730223 87730263 41 TCAACATCGGAGTCGCCATTCTGTTTATTAACTTTTTCATC TCAACATCGGAGTCGCCGTTCTGTTTATTAACTTTTTCATC < 41bp 1 0.095375591696727 1 0.165996879339218 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JPH3 ENSG00000154118 CDS Human protein_coding chr16:87730243 chr16:87730240 nonsynonymous SNV 0.999 3 18 hm5C_associated_SNPs_38627 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:87730239-87730265
64251 chr15 22940764 22940764 1 + C A STAD 22940756 + 22940736 22940776 41 GCACATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAG GCACATCCTCCGGCAGCAGCCCTCAGTAAAACATCTGCGAG < 41bp 1 0.377077205155769 1 0.314810454845428 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22940756 chr15:22940764 stopgain . 0 29 hm5C_associated_SNPs_38628 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:22940763-22940764
64251 chr5 10415649 10415649 1 + C A STAD 10415639 + 10415619 10415659 41 AATGTCGTTTTGGACGGGGACTGCCAAAATCCATGAGCTCT AATGTCGTTTTGGACGGGGACTGCCAAAATACATGAGCTCT < 41bp 1 0.229502781037194 1 0.331987142562866 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10415639 chr5:10415649 synonymous SNV . 0 31 hm5C_associated_SNPs_38631 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10415620-10415660
64251 chr19 5144277 5144277 1 + G A STAD 5144297 + 5144277 5144317 41 GTGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGG ATGTCCCTAGGCCAGGTGGTCATCACCAAGAACCGCAACGG < 41bp 1 0.348690519797947 1 0.133119821548462 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5144297 chr19:5144277 nonsynonymous SNV 0.901 2 1 hm5C_associated_SNPs_38632 0 0 1 FXR2 POSTAR2 ENCODE chr19:5144257-5144306
64251 chr17 30687715 30687715 1 + C T STAD 30687710 + 30687690 30687730 41 TCAGCCACAGCCTGTTCAACCTCAGCAAGGTTATATTCCTC TCAGCCACAGCCTGTTCAACCTCAGTAAGGTTATATTCCTC < 41bp 1 0.760929968988213 1 0.0650482177734375 experiment 0.478140062023573 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687710 chr17:30687715 stopgain 0.996 1 26 hm5C_associated_SNPs_38636 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30687620-30687756
64251 chr10 71243576 71243576 1 + G A STAD 71243594 + 71243574 71243614 41 TGGTCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAAC TGATCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAAC < 41bp 1 0.497614677579345 1 0.186168670654297 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243594 chr10:71243576 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_38637 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr20 62904614 62904614 1 + C T STAD 62904609 + 62904589 62904629 41 GCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACC GCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACC < 41bp 1 0.448460591166355 1 0.0189490616321564 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904609 chr20:62904614 synonymous SNV . 0 26 hm5C_associated_SNPs_38639 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:62904610-62904638
64251 chr19 45406424 45406424 1 + T C STAD 45406444 + 45406424 45406464 41 TGAGCCCTCCTGGCCCCCGCCTTCCACGCCCTTCCGATTCC CGAGCCCTCCTGGCCCCCGCCTTCCACGCCCTTCCGATTCC < 41bp 1 0.189349577123636 1 0.446806043386459 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOMM40 ENSG00000130204 CDS Human protein_coding chr19:45406444 chr19:45406424 stoploss 1.000 0 1 hm5C_associated_SNPs_38640 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:45406387-45406425
64251 chr22 45580379 45580379 1 + C T STAD 45580373 + 45580353 45580393 41 TCTGATTCCACCCAATATGCCATGTACGCGAACAGGGAAGA TCTGATTCCACCCAATATGCCATGTATGCGAACAGGGAAGA < 41bp 1 0.214577259495943 1 0.0911376774311066 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUP50 ENSG00000093000 CDS Human protein_coding chr22:45580373 chr22:45580379 nonsynonymous SNV 0.992 1 27 hm5C_associated_SNPs_38642 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr22:45580338-45580379
64251 chr14 105352951 105352951 1 + C T STAD 105352950 + 105352930 105352970 41 CACCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCTTC CACCAAGGGCCCCCGGGGAGCTAACTCCCGCCTCTTTCTTC < 41bp 1 0.123643182661743 1 0.0410560667514801 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP170B ENSG00000099814 CDS Human protein_coding chr14:105352950 chr14:105352951 nonsynonymous SNV 0.012 0 22 hm5C_associated_SNPs_38644 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:105352949-105352973
64251 chr5 6746349 6746349 1 + G A STAD 6746347 + 6746327 6746367 41 TTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT TTGCATCCAAGAATTGATGCCCAGAGAGCTGATGAAAACCT < 41bp 1 0.290942253721533 1 0.213539361953735 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746347 chr5:6746349 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_38645 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr5:6746337-6746390
64251 chr19 55897997 55897997 1 + G C STAD 55898006 + 55897986 55898026 41 ATTCACCGCAAGACTGTGGGCGTGGAGCCGGCAGCCGACGG ATTCACCGCAACACTGTGGGCGTGGAGCCGGCAGCCGACGG < 41bp 1 0.647729125027336 1 0.49397748708725 experiment 0.704541749945327 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898006 chr19:55897997 nonsynonymous SNV 0.975 4 12 hm5C_associated_SNPs_38646 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr19 55897997 55897997 1 + G C STAD 55898017 + 55897997 55898037 41 GACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCG CACTGTGGGCGTGGAGCCGGCAGCCGACGGCAAAGGTGTCG < 41bp 1 0.469760528516318 1 0.385560989379883 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898017 chr19:55897997 nonsynonymous SNV 0.975 4 1 hm5C_associated_SNPs_38647 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr4 79437046 79437046 1 + C T STAD 79437053 + 79437033 79437073 41 AGCGTGCGAGAGCCGAAGACCATCCAGCTCTACAAACACCT AGCGTGCGAGAGCTGAAGACCATCCAGCTCTACAAACACCT < 41bp 1 0.0539214948105482 1 0.0865097045898438 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79437053 chr4:79437046 nonsynonymous SNV 0.660 0 14 hm5C_associated_SNPs_38648 0 0 3 RPS3 POSTAR2 ENCODE chr4:79437007-79437060
64251 chr10 102762439 102762439 1 + C T STAD 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCATG < 41bp 1 0.355030208803731 1 0.519209206104279 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762439 synonymous SNV . 0 40 hm5C_associated_SNPs_38649 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:102762432-102762465
64251 chr17 57771152 57771152 1 + G C STAD 57771132 + 57771112 57771152 41 GCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGG GCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGC < 41bp 1 0.0340789709471277 1 0.114349365234375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57771132 chr17:57771152 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_38650 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:57771113-57771155
64251 chr20 62311267 62311267 1 + C T STAD 62311284 + 62311264 62311304 41 ACTCGCTGGACCAGATCATCCAGCACCTGGCAGGACGTGAG ACTTGCTGGACCAGATCATCCAGCACCTGGCAGGACGTGAG < 41bp 1 0.73753097543998 1 0.697623431682587 experiment 0.52493804912004 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62311284 chr20:62311267 nonsynonymous SNV 0.958 1 4 hm5C_associated_SNPs_38651 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:62311239-62311275
64251 chr10 115661633 115661633 1 + G A STAD 115661650 + 115661630 115661670 41 CTCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCAC CTCATAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCAC < 41bp 1 0.754574644802549 1 0.227912753820419 experiment 0.490850710394902 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661650 chr10:115661633 nonsynonymous SNV 0.825 1 4 hm5C_associated_SNPs_38652 0 0 1 UCHL5 POSTAR2 ENCODE chr10:115661535-115661658
64251 chr10 115661633 115661633 1 + G A STAD 115661651 + 115661631 115661671 41 TCGTAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCACT TCATAGGAGGAGAAAGAGACCCCATGGTAATGACAGTCACT < 41bp 1 0.247637247929065 1 0.20770388841629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661651 chr10:115661633 nonsynonymous SNV 0.825 1 3 hm5C_associated_SNPs_38653 0 0 1 UCHL5 POSTAR2 ENCODE chr10:115661535-115661658
64251 chr19 54652128 54652128 1 + C A STAD 54652142 + 54652122 54652162 41 AGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCA AGCTCCAAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCA < 41bp 1 0.633727122578777 1 0.340846300125122 experiment 0.732545754842446 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652142 chr19:54652128 synonymous SNV . 0 7 hm5C_associated_SNPs_38654 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:54652120-54652140
64251 chr1 21771652 21771652 1 + G A STAD 21771644 + 21771624 21771664 41 AGGCCCTGATGTAGAAACTTCCCCATTCGGTGCACCAAGAG AGGCCCTGATGTAGAAACTTCCCCATTCAGTGCACCAAGAG < 41bp 1 0.441743876857967 1 0.208679109811783 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBPF3 ENSG00000142794 CDS Human protein_coding chr1:21771644 chr1:21771652 nonsynonymous SNV 0.000 1 29 hm5C_associated_SNPs_38655 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:21771637-21771667
64251 chr4 3319330 3319330 1 + C T STAD 3319346 + 3319326 3319366 41 TGTCCGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA TGTCTGGACCCCGAAGGGAGCCCCCCATTTGAGGCCGCTCA < 41bp 1 0.0957241351342983 1 0.176879495382309 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319346 chr4:3319330 nonsynonymous SNV 0.020 0 5 hm5C_associated_SNPs_38656 0 0 2 BUD13 POSTAR2 ENCODE chr4:3319285-3319338
64251 chr3 41275088 41275088 1 + C A STAD 41275104 + 41275084 41275124 41 TCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT TCACATGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAAT < 41bp 1 0.115538518778384 1 0.303830355405807 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275104 chr3:41275088 synonymous SNV . 0 5 hm5C_associated_SNPs_38659 0 0 32 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr19 39219765 39219765 1 + G A STAD 39219773 + 39219753 39219793 41 GACCAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAA GACCAGGTCATCACTTCCTTCAAGGTCTTAGCAGGGGACAA < 41bp 1 0.596496193522576 1 0.879628300666809 experiment 0.807007612954848 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39219773 chr19:39219765 nonsynonymous SNV 0.999 0 13 hm5C_associated_SNPs_38660 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39219701-39219787
64251 chr9 125154761 125154761 1 + C T STAD 125154756 + 125154736 125154776 41 CAAGACCTGTCCCTACGTTTCCTTCCGTGTGCCGGATGCCA CAAGACCTGTCCCTACGTTTCCTTCTGTGTGCCGGATGCCA < 41bp 1 0.0221363297438598 1 0.0152914524078369 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125154756 chr9:125154761 nonsynonymous SNV 0.791 2 26 hm5C_associated_SNPs_38661 0 0 2 METAP2 POSTAR2 ENCODE chr9:125154728-125154801
64251 chr9 103002432 103002432 1 + G A STAD 103002451 + 103002431 103002471 41 CGTGGTTGATGTCTTGACCTCATATGAAAGCTGCAATATAA CATGGTTGATGTCTTGACCTCATATGAAAGCTGCAATATAA < 41bp 1 0.130550120468734 1 0.306302428245544 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control INVS ENSG00000119509 CDS Human protein_coding chr9:103002451 chr9:103002432 nonsynonymous SNV 0.952 4 2 hm5C_associated_SNPs_38662 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr9:103002381-103002433
64251 chr6 168352326 168352326 1 + C T STAD 168352327 + 168352307 168352347 41 TGGTATGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCGGGA TGGTATGAGAAGGAGAAGGTCCGCCTGGAGGAGGAGCGGGA < 41bp 1 0.150990734860937 1 0.192751228809357 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout AFDN ENSG00000130396 CDS Human protein_coding chr6:168352327 chr6:168352326 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_38663 0 0 16 BUD13 POSTAR2 ENCODE chr6:168352294-168352353
64251 chr3 61975362 61975362 1 + C A STAD 61975349 + 61975329 61975369 41 CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCCTATTGAC CTAGTGTCAGCTGTGGGGGCCGTCACCAGTCTCATATTGAC < 41bp 1 0.145642532034084 1 0.132719278335571 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:61975349 chr3:61975362 nonsynonymous SNV 0.997 5 34 hm5C_associated_SNPs_38667 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:61975338-61975369
64251 chr14 100996336 100996336 1 + C T STAD 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TATCACCCCGTGCTGCCCTCCGTCCTTGCCACCTGCTCCTG < 41bp 1 0.255942476042688 1 0.731877267360687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996336 synonymous SNV . 0 27 hm5C_associated_SNPs_38668 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr17 41570258 41570258 1 + G A STAD 41570239 + 41570219 41570259 41 GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGG GGAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCAG < 41bp 1 0.479344100341528 1 0.62048614025116 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570239 chr17:41570258 nonsynonymous SNV 0.994 0 40 hm5C_associated_SNPs_38669 0 0 3 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr17 41570258 41570258 1 + G A STAD 41570240 + 41570220 41570260 41 GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCGGG GAGCAGGAGTCAGAGTCCCCCCAAAGACCGGAAGGACCAGG < 41bp 1 0.319713569923428 1 0.753945112228394 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570240 chr17:41570258 nonsynonymous SNV 0.994 0 39 hm5C_associated_SNPs_38670 0 0 3 GRWD1 POSTAR2 ENCODE chr17:41570199-41570275
64251 chr1 19653763 19653763 1 + G A STAD 19653775 + 19653755 19653795 41 CTCTGTTCGCGCTGGTGATGCTGGGGAACACGCTGTATGGG CTCTGTTCACGCTGGTGATGCTGGGGAACACGCTGTATGGG < 41bp 1 0.795908966207177 1 0.838004767894745 experiment 0.408182067585646 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PQLC2 ENSG00000040487 CDS Human protein_coding chr1:19653775 chr1:19653763 nonsynonymous SNV 0.642 2 9 hm5C_associated_SNPs_38671 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:19653759-19653771
64251 chr20 62366609 62366609 1 + C T STAD 62366599 + 62366579 62366619 41 CTGGACCAGTGTGTGGAGACCCTGCAGAAGCAGACCAGGGT CTGGACCAGTGTGTGGAGACCCTGCAGAAGTAGACCAGGGT < 41bp 1 0.0584728383149286 1 0.417743444442749 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62366599 chr20:62366609 stopgain 0.154 0 31 hm5C_associated_SNPs_38672 0 0 12 BUD13 POSTAR2 ENCODE chr20:62366564-62366637
64251 chr4 178262744 178262744 1 + A T STAD 178262731 + 178262711 178262751 41 ACTGTGTGCCGCTTTGGGGACAATAACAGAATGACATATTT ACTGTGTGCCGCTTTGGGGACAATAACAGAATGTCATATTT < 41bp 1 0.429117986027535 1 0.149990439414978 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262731 chr4:178262744 nonsynonymous SNV 0.997 3 34 hm5C_associated_SNPs_38673 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:178262711-178262749
64251 chr4 178262744 178262744 1 + A T STAD 178262745 + 178262725 178262765 41 TGGGGACAATAACAGAATGACATATTTCTGTCCTCACTGTC TGGGGACAATAACAGAATGTCATATTTCTGTCCTCACTGTC < 41bp 1 0.170446920955981 1 0.0341855883598328 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178262745 chr4:178262744 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_38674 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:178262711-178262749
64251 chr2 113332867 113332867 1 + C T STAD 113332847 + 113332827 113332867 41 GAGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGGAAGC GAGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGGAAGT < 41bp 1 0.274452422545534 1 0.469116985797882 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113332847 chr2:113332867 nonsynonymous SNV 0.996 3 41 hm5C_associated_SNPs_38676 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:113332792-113332871
64251 chr12 124074934 124074934 1 + C T STAD 124074928 + 124074908 124074948 41 AGAAATGATCAATGAGCTAGCAGTGGCGATGACAGCTGTAA AGAAATGATCAATGAGCTAGCAGTGGTGATGACAGCTGTAA < 41bp 1 0.702682298024918 1 0.26972234249115 experiment 0.594635403950165 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED2 ENSG00000086598 CDS Human protein_coding chr12:124074928 chr12:124074934 nonsynonymous SNV 0.995 1 27 hm5C_associated_SNPs_38677 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:124074899-124074965
64251 chr17 42426659 42426659 1 + C T STAD 42426663 + 42426643 42426683 41 CAGCTACAGCTGCTGCCGTCCCCTTCTGGTGAGTGCCCCTC CAGCTACAGCTGCTGCTGTCCCCTTCTGGTGAGTGCCCCTC < 41bp 1 0.120455048957343 1 0.0392272770404816 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42426663 chr17:42426659 nonsynonymous SNV 0.304 1 17 hm5C_associated_SNPs_38679 0 0 7 DROSHA POSTAR2 ENCODE chr17:42426525-42426666
64251 chr17 42426659 42426659 1 + C T STAD 42426664 + 42426644 42426684 41 AGCTACAGCTGCTGCCGTCCCCTTCTGGTGAGTGCCCCTCA AGCTACAGCTGCTGCTGTCCCCTTCTGGTGAGTGCCCCTCA < 41bp 1 0.0822050596000531 1 0.261016637086868 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42426664 chr17:42426659 nonsynonymous SNV 0.304 1 16 hm5C_associated_SNPs_38680 0 0 7 DROSHA POSTAR2 ENCODE chr17:42426525-42426666
64251 chr17 42426659 42426659 1 + C T STAD 42426668 + 42426648 42426688 41 ACAGCTGCTGCCGTCCCCTTCTGGTGAGTGCCCCTCAGCCT ACAGCTGCTGCTGTCCCCTTCTGGTGAGTGCCCCTCAGCCT < 41bp 1 0.786288577248155 1 0.56370598077774 experiment 0.427422845503689 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42426668 chr17:42426659 nonsynonymous SNV 0.304 1 12 hm5C_associated_SNPs_38681 0 0 7 DROSHA POSTAR2 ENCODE chr17:42426525-42426666
64251 chr19 45797677 45797677 1 + G A STAD 45797692 + 45797672 45797712 41 TGAGCGCCCGTCACTGTTGCCAAATGGGAAAGAAAACAGGT TGAGCACCCGTCACTGTTGCCAAATGGGAAAGAAAACAGGT < 41bp 1 0.231286551909823 1 0.843668103218079 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797692 chr19:45797677 nonsynonymous SNV 0.983 2 6 hm5C_associated_SNPs_38684 0 0 1 PPIG POSTAR2 ENCODE chr19:45797645-45797700
64251 chr15 22969309 22969309 1 + G T STAD 22969313 + 22969293 22969333 41 CCCTGCACGTCTTCTGGGAGCTCAACTATGACTTCCTGCCC CCCTGCACGTCTTCTGTGAGCTCAACTATGACTTCCTGCCC < 41bp 1 0.715973289604287 1 0.212426543235779 experiment 0.568053420791425 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969313 chr15:22969309 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_38685 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:22969289-22969312
64251 chr5 139909134 139909134 1 + A G STAD 139909148 + 139909128 139909168 41 TTTGCCACCTACATTTGGCCCAGCCACACTTTTCAATCACT TTTGCCGCCTACATTTGGCCCAGCCACACTTTTCAATCACT < 41bp 1 0.0610545801332628 1 0.0827454328536987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139909148 chr5:139909134 synonymous SNV . 0 7 hm5C_associated_SNPs_38686 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:139909123-139909144
64251 chr8 104343682 104343682 1 + A G STAD 104343665 + 104343645 104343685 41 CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCACCC CCAAGCAGCCTCAAAGGTTCCACATCTCTGCTTGTTCGCCC < 41bp 1 0.513623850371666 1 0.0462077856063843 experiment 0.972752299256668 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343665 chr8:104343682 nonsynonymous SNV 0.726 0 38 hm5C_associated_SNPs_38687 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr22 38021856 38021856 1 + C T STAD 38021859 + 38021839 38021879 41 GATCTCCCGCCTGCGGGCACCACCTACCCAGCTATGCCCAC GATCTCCCGCCTGCGGGTACCACCTACCCAGCTATGCCCAC < 41bp 1 0.418795907860588 1 0.166118651628494 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021859 chr22:38021856 synonymous SNV . 0 18 hm5C_associated_SNPs_38688 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr22:38021837-38021859
64251 chr3 136002741 136002741 1 + T C STAD 136002747 + 136002727 136002767 41 GGCCCATGTGCTGGTGGGGCCGTCTACTCCCCAGCCCTAAC GGCCCATGTGCTGGCGGGGCCGTCTACTCCCCAGCCCTAAC < 41bp 1 0.198817856699065 1 0.351216793060303 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCCB ENSG00000114054 CDS Human protein_coding chr3:136002747 chr3:136002741 synonymous SNV . 0 15 hm5C_associated_SNPs_38689 0 0 6 BUD13 POSTAR2 ENCODE chr3:136002670-136002789
64251 chr6 138727163 138727163 1 + T C STAD 138727165 + 138727145 138727185 41 CGTGGAGCCTGGTTCAGGTCCTTTTAGTGAGTCTACCATTA CGTGGAGCCTGGTTCAGGCCCTTTTAGTGAGTCTACCATTA < 41bp 1 0.0945935166966293 1 0.030289500951767 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138727165 chr6:138727163 synonymous SNV . 0 19 hm5C_associated_SNPs_38690 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:138727138-138727176
64251 chr17 37359334 37359334 1 + C T STAD 37359316 + 37359296 37359336 41 GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGT GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACTGT < 41bp 1 0.329819202213971 1 0.196842670440674 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359316 chr17:37359334 nonsynonymous SNV 0.308 1 39 hm5C_associated_SNPs_38691 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359334 37359334 1 + C T STAD 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACTGTGAA < 41bp 1 0.333812985266208 1 0.0761534571647644 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359334 nonsynonymous SNV 0.308 1 36 hm5C_associated_SNPs_38692 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359334 37359334 1 + C T STAD 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGCGCCGGCTGCTCAGAAGATACTGTGAATCT < 41bp 1 0.495163420186631 1 0.111561059951782 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359334 nonsynonymous SNV 0.308 1 33 hm5C_associated_SNPs_38693 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359334 37359334 1 + C T STAD 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCTGCTCAGAAGATACTGTGAATCTAAGAAGATCGA < 41bp 1 0.455185337595794 1 0.178947478532791 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359334 nonsynonymous SNV 0.308 1 22 hm5C_associated_SNPs_38694 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr8 11643661 11643661 1 + C T STAD 11643658 + 11643638 11643678 41 CTACCAGAAAGAACAGTGCCCTGCTGGCCACCAGGTCATGA CTACCAGAAAGAACAGTGCCCTGTTGGCCACCAGGTCATGA < 41bp 1 0.255253073516258 1 0.0209600925445557 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11643658 chr8:11643661 nonsynonymous SNV 0.092 0 24 hm5C_associated_SNPs_38697 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:11643633-11643671
64251 chr20 35862431 35862431 1 + G C STAD 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTGGATCCGCATTGGTGCCAATGTCTC < 41bp 1 0.319747809075747 1 0.184706062078476 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862431 synonymous SNV . 0 24 hm5C_associated_SNPs_38699 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:35862416-35862439
64251 chr16 29821423 29821423 1 + G A STAD 29821428 + 29821408 29821448 41 GGTTTGTCCAATGGCGGCGGCAGCGGCAGCGGCGGCAGCGG GGTTTGTCCAATGGCAGCGGCAGCGGCAGCGGCGGCAGCGG < 41bp 1 0.772792284593474 1 0.413539558649063 experiment 0.454415430813052 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29821428 chr16:29821423 synonymous SNV . 0 16 hm5C_associated_SNPs_38700 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr16:29821395-29821424
64251 chr17 27027988 27027988 1 + G A STAD 27027991 + 27027971 27028011 41 CCAGCCCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG CCAGCCCAGCAGCCAGTAGCCACACCACTAATGACCCCTAG < 41bp 1 0.323780128620954 1 0.350154936313629 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27027991 chr17:27027988 synonymous SNV . 0 18 hm5C_associated_SNPs_38701 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:27027980-27028000
64251 chr3 49060165 49060165 1 + A T STAD 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCGAAGACTGCTTTTCCCTCTTCTGGTTGCTGGAGCCC < 41bp 1 0.3695692356408 1 0.119828552007675 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060165 nonsynonymous SNV 0.993 4 12 hm5C_associated_SNPs_38702 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:49060147-49060183
64251 chr3 49060162 49060162 1 + G C STAD 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCGAACACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC < 41bp 1 0.31645556219798 1 0.138821959495544 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060162 nonsynonymous SNV 0.988 2 9 hm5C_associated_SNPs_38704 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:49060147-49060183
64251 chr11 46747450 46747450 1 + G T STAD 46747436 + 46747416 46747456 41 TCAAGTCACTGTAGCGATGACTCCACGCTCCGAAGGCTCCA TCAAGTCACTGTAGCGATGACTCCACGCTCCGAATGCTCCA < 41bp 1 0.715151483712339 1 0.959439873695374 experiment 0.569697032575322 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control F2 ENSG00000180210 CDS Human protein_coding chr11:46747436 chr11:46747450 nonsynonymous SNV 0.013 3 35 hm5C_associated_SNPs_38705 0 0 1 SND1 POSTAR2 ENCODE chr11:46747442-46747459
64251 chr1 214794185 214794185 1 + C A STAD 214794190 + 214794170 214794210 41 AACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAATAGGG AACAAGAGGTGACTCAAAGTCGATCAACTTTGCAAATAGGG < 41bp 1 0.0922275618256218 1 0.165259271860123 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794190 chr1:214794185 nonsynonymous SNV 0.009 3 16 hm5C_associated_SNPs_38706 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr5 156816266 156816266 1 + G A STAD 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTCAAGGTCATCCTGAC < 41bp 1 0.277203437735171 1 0.689785838127136 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816266 nonsynonymous SNV 0.998 1 28 hm5C_associated_SNPs_38707 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr2 191524446 191524446 1 + G A STAD 191524463 + 191524443 191524483 41 CCCGCGTCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC CCCACGTCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC < 41bp 1 0.539058392158439 1 0.254702866077423 experiment 0.921883215683123 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524463 chr2:191524446 nonsynonymous SNV 0.844 1 4 hm5C_associated_SNPs_38708 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:191524396-191524448
64251 chrX 102632690 102632690 1 + C T STAD 102632708 + 102632688 102632728 41 TGCGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCAT TGTGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCAT < 41bp 1 0.139372598177476 1 0.0493842959403992 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632708 chrX:102632690 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_38709 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632690 102632690 1 + C T STAD 102632710 + 102632690 102632730 41 CGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCA TGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCA < 41bp 1 0.76656821867022 1 0.343386590480804 experiment 0.46686356265956 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632710 chrX:102632690 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_38710 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr14 64628976 64628976 1 + A C STAD 64628971 + 64628951 64628991 41 ACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATA ACAACCTGGCAGAGATCCTGCCCCCCGCCCTGCAGGACATA < 41bp 1 0.0690209296265039 1 0.0405756831169128 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64628971 chr14:64628976 synonymous SNV . 0 26 hm5C_associated_SNPs_38711 0 0 1 EIF3H POSTAR2 ENCODE chr14:64628937-64628987
64251 chrX 47092439 47092439 1 + G A STAD 47092421 + 47092401 47092441 41 ATCTCGCACAGCTGCGTTGGCTGTAGAAGAGAACGGACGGC ATCTCGCACAGCTGCGTTGGCTGTAGAAGAGAACGGACAGC < 41bp 1 0.694107240228743 1 0.380794078111649 experiment 0.611785519542513 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47092421 chrX:47092439 synonymous SNV . 0 39 hm5C_associated_SNPs_38712 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47092418-47092445
64251 chr3 126725006 126725006 1 + G A STAD 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTCGTCTTCTACAACTACAGCGTCCACCAGTC < 41bp 1 0.21153828636093 1 0.136605530977249 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126725006 nonsynonymous SNV 1.000 5 26 hm5C_associated_SNPs_38715 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:126724978-126725006
64251 chr6 38029470 38029470 1 + T A STAD 38029468 + 38029448 38029488 41 CACCAGTGACAACAACAATACCTCGATAACCACGCCAACTC CACCAGTGACAACAACAATACCACGATAACCACGCCAACTC < 41bp 1 0.26020789508958 1 0.194863647222519 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38029468 chr6:38029470 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_38716 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:38029443-38029472
64251 chr2 74154140 74154140 1 + G A STAD 74154149 + 74154129 74154169 41 GCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAA GCCTGCACGCGAGGCGCGGGCCCCGAAGGCTCTCCATCGAA < 41bp 1 0.612427116297426 1 0.243247717618942 experiment 0.775145767405149 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154149 chr2:74154140 nonsynonymous SNV 0.076 1 12 hm5C_associated_SNPs_38717 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr2 74154140 74154140 1 + G A STAD 74154151 + 74154131 74154171 41 CTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG CTGCACGCGAGGCGCGGGCCCCGAAGGCTCTCCATCGAAGG < 41bp 1 0.70668981851345 1 0.33574390411377 experiment 0.586620362973101 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154151 chr2:74154140 nonsynonymous SNV 0.076 1 10 hm5C_associated_SNPs_38718 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr2 74154140 74154140 1 + G A STAD 74154152 + 74154132 74154172 41 TGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC TGCACGCGAGGCGCGGGCCCCGAAGGCTCTCCATCGAAGGC < 41bp 1 0.721702752945232 1 0.504762530326843 experiment 0.556594494109537 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154152 chr2:74154140 nonsynonymous SNV 0.076 1 9 hm5C_associated_SNPs_38719 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr5 172315753 172315753 1 + C T STAD 172315759 + 172315739 172315779 41 CAGCCAACGTACACCGGGGCCATTAGTGAGTAGCCAACCTC CAGCCAACGTACACTGGGGCCATTAGTGAGTAGCCAACCTC < 41bp 1 0.162684806011678 1 0.0571464598178864 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172315759 chr5:172315753 synonymous SNV . 0 15 hm5C_associated_SNPs_38722 0 0 2 DDX3X POSTAR2 ENCODE chr5:172315701-172315759
64251 chr12 65082110 65082110 1 + A G STAD 65082124 + 65082104 65082144 41 ATGAATACACTTCATATCAGCAGCACAAACACTGTCGGGGA ATGAATGCACTTCATATCAGCAGCACAAACACTGTCGGGGA < 41bp 1 0.720753746494029 1 0.387045502662659 experiment 0.558492507011942 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RASSF3 ENSG00000153179 CDS Human protein_coding chr12:65082124 chr12:65082110 nonsynonymous SNV 0.950 2 7 hm5C_associated_SNPs_38723 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr12:65082093-65082123
64251 chr17 27011920 27011920 1 + C T STAD 27011913 + 27011893 27011933 41 GGTGAAGGAGAAGTGACAGACTTCCTTCGACTGCCCCATTT GGTGAAGGAGAAGTGACAGACTTCCTTTGACTGCCCCATTT < 41bp 1 0.369657961655149 1 0.121444791555405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011913 chr17:27011920 stopgain 0.958 1 28 hm5C_associated_SNPs_38725 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:27011911-27011935
64251 chr17 27011920 27011920 1 + C T STAD 27011928 + 27011908 27011948 41 ACAGACTTCCTTCGACTGCCCCATTTTACCAAACGGCGAAC ACAGACTTCCTTTGACTGCCCCATTTTACCAAACGGCGAAC < 41bp 1 0.0758811253044482 1 0.076342910528183 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011928 chr17:27011920 stopgain 0.958 1 13 hm5C_associated_SNPs_38726 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:27011911-27011935
64251 chr7 99701287 99701287 1 + G A STAD 99701304 + 99701284 99701324 41 GCCGCCCCGTCCTGTCCAGTCGCTCTGACCAGGTGAGGGAA GCCACCCCGTCCTGTCCAGTCGCTCTGACCAGGTGAGGGAA < 41bp 1 0.446804242137339 1 0.371312946081161 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99701304 chr7:99701287 nonsynonymous SNV 0.997 4 4 hm5C_associated_SNPs_38729 0 0 1 DDX24 POSTAR2 ENCODE chr7:99701234-99701300
64251 chr15 40509698 40509698 1 + A G STAD 40509700 + 40509680 40509720 41 CTTAAATCTGGGCTCAGAATCCACGATCCCTATGATTGTAA CTTAAATCTGGGCTCAGAGTCCACGATCCCTATGATTGTAA < 41bp 1 0.125128170371081 1 0.1215760409832 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40509700 chr15:40509698 nonsynonymous SNV 0.999 3 19 hm5C_associated_SNPs_38730 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:40509687-40509752
64251 chr17 4701662 4701662 1 + T A STAD 4701676 + 4701656 4701696 41 GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT GGCAAGAACTTTTGGGAGACCAGATACCCAAATTCGCCGTT < 41bp 1 0.784330784635086 1 0.521468341350555 experiment 0.431338430729828 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701676 chr17:4701662 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_38731 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4701628-4701787
64251 chr6 168265408 168265408 1 + G C STAD 168265414 + 168265394 168265434 41 AGTATTCACTCTATGAAGTGCATGTCAGCGGAGGTCAGTGT AGTATTCACTCTATCAAGTGCATGTCAGCGGAGGTCAGTGT < 41bp 1 0.0893218735574598 1 0.041837602853775 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168265414 chr6:168265408 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_38732 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168265378-168265412
64251 chr12 111884628 111884628 1 + G A STAD 111884617 + 111884597 111884637 41 AGGAGGTCCGGTGGTGCACACGGCTTGAGATGCCTGACAAC AGGAGGTCCGGTGGTGCACACGGCTTGAGATACCTGACAAC < 41bp 1 0.585382615306177 1 0.592601597309113 experiment 0.829234769387647 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884617 chr12:111884628 nonsynonymous SNV 0.994 4 32 hm5C_associated_SNPs_38736 0 0 1 DDX24 POSTAR2 ENCODE chr12:111884575-111884630
64251 chr8 42829324 42829324 1 + G T TGCT 42829322 + 42829302 42829342 41 GTGTACAAGCTCAAGAAGGGCAGCTCACAACACAAGGTAAA GTGTACAAGCTCAAGAAGGGCATCTCACAACACAAGGTAAA < 41bp 1 0.0429081232895255 1 0.081483006477356 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HOOK3 ENSG00000168172 CDS Human protein_coding chr8:42829322 chr8:42829324 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_38737 0 0 3 UCHL5 POSTAR2 ENCODE chr8:42829293-42829338
64251 chr8 104438341 104438341 1 + G T TGCT 104438331 + 104438311 104438351 41 TGGAAAATGGATGGGCCAGGCTATGGAGACGAGGAAGAGCC TGGAAAATGGATGGGCCAGGCTATGGAGACTAGGAAGAGCC < 41bp 1 0.492409402911736 1 0.2547707259655 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104438331 chr8:104438341 stopgain 0.988 1 31 hm5C_associated_SNPs_38738 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104438319-104438356
64251 chr17 42427035 42427035 1 + G T TGCT 42427030 + 42427010 42427050 41 ATGCAGGTTTCTCTGTGTTCCACAGGCCGTGGCATGCGGGG ATGCAGGTTTCTCTGTGTTCCACAGTCCGTGGCATGCGGGG < 41bp 1 0.555203505765947 1 0.552425622940063 experiment 0.889592988468107 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42427030 chr17:42427035 nonsynonymous SNV 0.170 2 26 hm5C_associated_SNPs_38739 0 0 6 METAP2 POSTAR2 ENCODE chr17:42427033-42427069
64251 chr19 5667167 5667167 1 + T C TGCT 5667169 + 5667149 5667189 41 GGGCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACA GGGCCGGGGGCTGCCTCCCCCCCCCAGGTTTGTGTCCCACA < 41bp 1 0.232297384702153 1 0.324173271656036 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667169 chr19:5667167 synonymous SNV . 0 19 hm5C_associated_SNPs_38744 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667167 5667167 1 + T C TGCT 5667170 + 5667150 5667190 41 GGCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACAC GGCCGGGGGCTGCCTCCCCCCCCCAGGTTTGTGTCCCACAC < 41bp 1 0.790503288733202 1 0.609231531620026 experiment 0.418993422533596 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667170 chr19:5667167 synonymous SNV . 0 18 hm5C_associated_SNPs_38745 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667167 5667167 1 + T C TGCT 5667171 + 5667151 5667191 41 GCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACC GCCGGGGGCTGCCTCCCCCCCCCAGGTTTGTGTCCCACACC < 41bp 1 0.485236352555845 1 0.185346037149429 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667171 chr19:5667167 synonymous SNV . 0 17 hm5C_associated_SNPs_38746 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667167 5667167 1 + T C TGCT 5667172 + 5667152 5667192 41 CCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCC CCGGGGGCTGCCTCCCCCCCCCAGGTTTGTGTCCCACACCC < 41bp 1 0.628191582883737 1 0.61762261390686 experiment 0.743616834232526 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667172 chr19:5667167 synonymous SNV . 0 16 hm5C_associated_SNPs_38747 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr19 5667167 5667167 1 + T C TGCT 5667173 + 5667153 5667193 41 CGGGGGCTGCCTCCTCCCCCCAGGTTTGTGTCCCACACCCG CGGGGGCTGCCTCCCCCCCCCAGGTTTGTGTCCCACACCCG < 41bp 1 0.707199421813734 1 0.669612646102905 experiment 0.585601156372532 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SAFB ENSG00000160633 CDS Human protein_coding chr19:5667173 chr19:5667167 synonymous SNV . 0 15 hm5C_associated_SNPs_38748 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr11 831648 831648 1 + G A TGCT 831668 + 831648 831688 41 GCTGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGC ACTGCTGTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGC < 41bp 1 0.207260036016979 1 0.159077793359756 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831668 chr11:831648 nonsynonymous SNV 0.974 2 1 hm5C_associated_SNPs_38749 0 0 1 LSM11 POSTAR2 ENCODE chr11:831533-831676
64251 chr5 149754707 149754707 1 + C T TGCT 149754724 + 149754704 149754744 41 TGGCAGCCATGAATGCAGCTCAGGTGAGGCTGGAAGCCGCC TGGTAGCCATGAATGCAGCTCAGGTGAGGCTGGAAGCCGCC < 41bp 1 0.488372738452455 1 0.437227040529251 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754724 chr5:149754707 nonsynonymous SNV 0.016 0 4 hm5C_associated_SNPs_38750 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:149754672-149754711
64251 chr10 94773973 94773973 1 + G T TGCT 94773982 + 94773962 94774002 41 TCTGAGCCTGTGCCAGGATTCCAGGGGGATACCCTGCAGCT TCTGAGCCTGTTCCAGGATTCCAGGGGGATACCCTGCAGCT < 41bp 1 0.654619669928617 1 0.858836054801941 experiment 0.690760660142766 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94773982 chr10:94773973 synonymous SNV . 0 12 hm5C_associated_SNPs_38751 0 0 6 SF3B4 POSTAR2 ENCODE chr10:94773938-94773995
64251 chr16 1703072 1703072 1 + C A TGCT 1703054 + 1703034 1703074 41 GCTTGAGTGATGAAGAGGACCAGAAGCCAGTGCGCCTGCCT GCTTGAGTGATGAAGAGGACCAGAAGCCAGTGCGCCTGACT < 41bp 1 0.539373869709229 1 0.721439599990845 experiment 0.921252260581543 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1703054 chr16:1703072 nonsynonymous SNV 0.953 2 39 hm5C_associated_SNPs_38753 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:1703039-1703072
64251 chrX 19373827 19373827 1 + C T TGCT 19373838 + 19373818 19373858 41 TATCCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT TATCCTGTGTGTCCGAGAGGCAACAAGGTTTGCTGCTGCCT < 41bp 1 0.612279076704734 1 0.359048783779144 experiment 0.775441846590533 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373838 chrX:19373827 synonymous SNV . 0 10 hm5C_associated_SNPs_38754 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:19373807-19373834
64251 chr8 110569202 110569202 1 + C A TGCT 110569185 + 110569165 110569205 41 TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATACCA < 41bp 1 0.0324512315411791 1 0.102491855621338 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569185 chr8:110569202 synonymous SNV . 0 38 hm5C_associated_SNPs_38755 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:110569178-110569205
64251 chr5 167943865 167943865 1 + G A TGCT 167943878 + 167943858 167943898 41 CATAACCGGTTGAATGACTACATCTTCTCCTTTGACAAAAT CATAACCAGTTGAATGACTACATCTTCTCCTTTGACAAAAT < 41bp 1 0.173012317327222 1 0.0913183093070984 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943878 chr5:167943865 nonsynonymous SNV 0.958 4 8 hm5C_associated_SNPs_38756 1 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:167943780-167943869
64251 chr17 80680735 80680735 1 + G T TGCT 80680754 + 80680734 80680774 41 TGGTGACGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGG TTGTGACGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGG < 41bp 1 0.447870161623369 1 0.73688530921936 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680754 chr17:80680735 synonymous SNV . 0 2 hm5C_associated_SNPs_38771 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80680700-80680736
64251 chr16 1818243 1818243 1 + G A TGCT 1818253 + 1818233 1818273 41 CCCGTCCCGGGGGCATCATCCACGTGTATGGCGATGACAGC CCCGTCCCGGAGGCATCATCCACGTGTATGGCGATGACAGC < 41bp 1 0.493198905428742 1 0.514560401439667 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1818253 chr16:1818243 synonymous SNV . 0 11 hm5C_associated_SNPs_38772 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1818228-1818255
64251 chr15 52353621 52353621 1 + C T TGCT 52353617 + 52353597 52353637 41 ATGGATGAGCCAATTTCAAGCCATCCTTTTCATATTGAAGA ATGGATGAGCCAATTTCAAGCCATTCTTTTCATATTGAAGA < 41bp 1 0.0497247496860612 1 0.121957808732986 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52353617 chr15:52353621 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_38773 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:52353593-52353624
64251 chr10 105174894 105174894 1 + G T TGCT 105174899 + 105174879 105174919 41 TACCACATCGGGGATGAGGTCAAGTGCCGGGTGAGCCTCCT TACCACATCGGGGATTAGGTCAAGTGCCGGGTGAGCCTCCT < 41bp 1 0.464155154474886 1 0.65550035238266 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105174899 chr10:105174894 stopgain 0.896 1 16 hm5C_associated_SNPs_38774 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr10:105174885-105174897
64251 chr12 56505268 56505268 1 + C T TGCT 56505263 + 56505243 56505283 41 TTCTTCCTGTTTTCCAGGCCCTCCTCCAGAGTTCTGCAAGT TTCTTCCTGTTTTCCAGGCCCTCCTTCAGAGTTCTGCAAGT < 41bp 1 0.235681654601508 1 0.176472753286362 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56505263 chr12:56505268 synonymous SNV . 0 26 hm5C_associated_SNPs_38775 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:56505257-56505282
64251 chr7 6634134 6634134 1 + G T TGCT 6634139 + 6634119 6634159 41 CTGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA CTGCTGTTTGGTGCCTGGATCCATTCAGACGCTGAAGCAGA < 41bp 1 0.0404842473627782 1 0.367957413196564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634139 chr7:6634134 synonymous SNV . 0 16 hm5C_associated_SNPs_38776 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:6634105-6634139
64251 chr19 42410875 42410875 1 + C T TGCT 42410885 + 42410865 42410905 41 AGGAATTTTGCCGCCTGAGACCCCTCCTGTCTCAGCTTGGG AGGAATTTTGTCGCCTGAGACCCCTCCTGTCTCAGCTTGGG < 41bp 1 0.152045425446856 1 0.0720550715923309 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42410885 chr19:42410875 nonsynonymous SNV 0.980 0 11 hm5C_associated_SNPs_38777 0 0 13 BUD13 POSTAR2 ENCODE chr19:42410871-42410903
64251 chr7 101821755 101821755 1 + G T TGCT 101821775 + 101821755 101821795 41 GCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT TCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT < 41bp 1 0.465799309999626 1 0.847205221652985 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101821775 chr7:101821755 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_38778 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:101821753-101821786
64251 chr16 67876460 67876460 1 + G T TGCT 67876451 + 67876431 67876471 41 GGCCGGGCCGGGCCGCGCGGCGCAGCCATGCCTGGCTTTAC GGCCGGGCCGGGCCGCGCGGCGCAGCCATTCCTGGCTTTAC < 41bp 1 0.620503364170313 1 0.375467330217361 experiment 0.758993271659373 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control THAP11 ENSG00000168286 CDS Human protein_coding chr16:67876451 chr16:67876460 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_38779 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:67876460-67876480
64251 chr7 4830438 4830438 1 + C T TGCT 4830446 + 4830426 4830466 41 TGCTGCCCTGCCCAGGTGTCCCCCCCAGGTGGTCACCGTGC TGCTGCCCTGCCTAGGTGTCCCCCCCAGGTGGTCACCGTGC < 41bp 1 0.0787013284885063 1 0.0150521695613861 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4830446 chr7:4830438 synonymous SNV . 0 13 hm5C_associated_SNPs_38780 0 0 1 PPIG POSTAR2 ENCODE chr7:4830390-4830462
64251 chr1 155165017 155165017 1 + T C TGCT 155164997 + 155164977 155165017 41 GGCGGGCGGGAGGGACGGGACGCGGTGCAGTGTTGTTTTTT GGCGGGCGGGAGGGACGGGACGCGGTGCAGTGTTGTTTTTC < 41bp 1 0.767161449379123 1 0.642228007316589 experiment 0.465677101241754 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR92B ENSG00000271748 ncRNA_exonic Human other chr1:155164997 chr1:155165017 . . 0 41 hm5C_associated_SNPs_38781 0 0 5 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:155165001-155165021
64251 chr1 155165017 155165017 1 + T C TGCT 155164999 + 155164979 155165019 41 CGGGCGGGAGGGACGGGACGCGGTGCAGTGTTGTTTTTTCC CGGGCGGGAGGGACGGGACGCGGTGCAGTGTTGTTTTTCCC < 41bp 1 0.625663181900297 1 0.411369174718857 experiment 0.748673636199406 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR92B ENSG00000271748 ncRNA_exonic Human other chr1:155164999 chr1:155165017 . . 0 39 hm5C_associated_SNPs_38782 0 0 5 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:155165001-155165021
64251 chr14 50789405 50789405 1 + C T TGCT 50789391 + 50789371 50789411 41 AAATACAAGATTCAGGCGATCGACGCCACCGACTCTTGTAT AAATACAAGATTCAGGCGATCGACGCCACCGACTTTTGTAT < 41bp 1 0.607871128816165 1 0.228090286254883 experiment 0.784257742367669 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789391 chr14:50789405 nonsynonymous SNV 0.992 5 35 hm5C_associated_SNPs_38783 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr14 50789405 50789405 1 + C T TGCT 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATTCAGGCGATCGACGCCACCGACTTTTGTATCATGA < 41bp 1 0.0716124178838685 1 0.152482151985168 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789405 nonsynonymous SNV 0.992 5 30 hm5C_associated_SNPs_38784 0 0 1 GRWD1 POSTAR2 ENCODE chr14:50789242-50789439
64251 chr6 38029485 38029485 1 + A G THCA 38029468 + 38029448 38029488 41 CACCAGTGACAACAACAATACCTCGATAACCACGCCAACTC CACCAGTGACAACAACAATACCTCGATAACCACGCCAGCTC < 41bp 1 0.140738958713886 1 0.313605189323425 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38029468 chr6:38029485 nonsynonymous SNV 1.000 0 38 hm5C_associated_SNPs_38786 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:38029472-38029504
64251 chr3 57294019 57294019 1 + C A THCA 57294032 + 57294012 57294052 41 AGAATCGCATTTATTAGTCACTTGTGACTGTTTAAAGTAAG AGAATCGAATTTATTAGTCACTTGTGACTGTTTAAAGTAAG < 41bp 1 0.135496759595666 1 0.110286921262741 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57294032 chr3:57294019 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_38787 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:57294015-57294048
64251 chr3 183369013 183369013 1 + G T THCA 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATGAAGCAAGACTGTACCACATACTTGGGAATGAAATGAT < 41bp 1 0.0962907885365241 1 0.150333076715469 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369013 nonsynonymous SNV 0.963 2 14 hm5C_associated_SNPs_38788 0 0 3 RBM15 POSTAR2 ENCODE chr3:183368993-183369064
64251 chr4 87683999 87683999 1 + C A THCA 87684010 + 87683990 87684030 41 CGTGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCC CGTGGTACCATGAGGCACATCTCGGAGAACTCCTTTGGGCC < 41bp 1 0.705777658260589 1 0.916280031204224 experiment 0.588444683478822 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87684010 chr4:87683999 nonsynonymous SNV 0.938 0 10 hm5C_associated_SNPs_38789 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:87683976-87684016
64251 chr4 87683999 87683999 1 + C A THCA 87684012 + 87683992 87684032 41 TGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCCAT TGGTACCATGAGGCACATCTCGGAGAACTCCTTTGGGCCAT < 41bp 1 0.787991361506592 1 0.932408273220062 experiment 0.424017276986816 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87684012 chr4:87683999 nonsynonymous SNV 0.938 0 8 hm5C_associated_SNPs_38790 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:87683976-87684016
64251 chr14 105175694 105175694 1 + C A THCA 105175682 + 105175662 105175702 41 CCAAGTTTGATGTGGAGGTTCTCAAACAACTCCTTAAGCTC CCAAGTTTGATGTGGAGGTTCTCAAACAACTCATTAAGCTC < 41bp 1 0.479483733504038 1 0.848838448524475 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control INF2 ENSG00000203485 CDS Human protein_coding chr14:105175682 chr14:105175694 nonsynonymous SNV 0.961 0 33 hm5C_associated_SNPs_38791 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr14:105175670-105175699
64251 chr16 72139460 72139460 1 + C A THCA 72139447 + 72139427 72139467 41 CGTTCGGAAGTGCATCGTTGCCACCAATATTGCCGAGACGT CGTTCGGAAGTGCATCGTTGCCACCAATATTGCAGAGACGT < 41bp 1 0.0528297739257155 1 0.0865331292152405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72139447 chr16:72139460 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_38792 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:72139443-72139469
64251 chr16 81078068 81078068 1 + A T THCA 81078069 + 81078049 81078089 41 CTCAAACTGAAGAGAGTGAACTTAGCACCATGACCACCGAG CTCAAACTGAAGAGAGTGATCTTAGCACCATGACCACCGAG < 41bp 1 0.407406719013537 1 0.329730123281479 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078069 chr16:81078068 nonsynonymous SNV 0.997 1 20 hm5C_associated_SNPs_38793 0 0 5 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr16:81078040-81078080
64251 chr6 26156708 26156708 1 + G C THCA 26156707 + 26156687 26156727 41 GGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTG GGCCCGCAAGTCTGCAGGTGCCGCCAAGCGCAAAGCGTCTG < 41bp 1 0.245448024040276 1 0.0595986545085907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156707 chr6:26156708 synonymous SNV . 0 22 hm5C_associated_SNPs_38794 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156540-26156740
64251 chrX 117815662 117815662 1 + T C THCA 117815659 + 117815639 117815679 41 TCTTCTATTGTGATATAGGTCAATGCTGGTCCATTAGCATA TCTTCTATTGTGATATAGGTCAACGCTGGTCCATTAGCATA < 41bp 1 0.313773007654057 1 0.0763935744762421 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DOCK11 ENSG00000147251 CDS Human protein_coding chrX:117815659 chrX:117815662 synonymous SNV . 0 24 hm5C_associated_SNPs_38795 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:117815661-117815688
64251 chr19 14562693 14562693 1 + G T THCA 14562705 + 14562685 14562725 41 ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG ACCATCCCTTGGAACCCTACCCCCTCAATGGGGGGACCTGG < 41bp 1 0.109215962028489 1 0.0728162825107574 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562705 chr19:14562693 synonymous SNV . 0 9 hm5C_associated_SNPs_38797 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr19 14562693 14562693 1 + G T THCA 14562706 + 14562686 14562726 41 CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG CCATCCCTTGGAACCCTACCCCCTCAATGGGGGGACCTGGG < 41bp 1 0.0478629482303473 1 0.304154098033905 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562706 chr19:14562693 synonymous SNV . 0 8 hm5C_associated_SNPs_38798 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr19 14562693 14562693 1 + G T THCA 14562708 + 14562688 14562728 41 ATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC ATCCCTTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC < 41bp 1 0.679522068701818 1 0.94440495967865 experiment 0.640955862596365 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562708 chr19:14562693 synonymous SNV . 0 6 hm5C_associated_SNPs_38799 0 0 2 FMR1 POSTAR2 ENCODE chr19:14562648-14562699
64251 chr16 89925701 89925701 1 + G T THCA 89925700 + 89925680 89925720 41 CACCCACCCCCCAGGAGGGACGGAGCCACCACGGCCCCGAG CACCCACCCCCCAGGAGGGACTGAGCCACCACGGCCCCGAG < 41bp 1 0.421094219008665 1 0.385606408119202 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SPIRE2 ENSG00000204991 CDS Human protein_coding chr16:89925700 chr16:89925701 synonymous SNV . 0 22 hm5C_associated_SNPs_38800 0 0 4 GRWD1 POSTAR2 ENCODE chr16:89925601-89925705
64251 chr9 137323832 137323832 1 + C T THCA 137323830 + 137323810 137323850 41 GCTGCCTGCGCGCCATCGTCCTCTTTAACCCTGGTATGGCC GCTGCCTGCGCGCCATCGTCCTTTTTAACCCTGGTATGGCC < 41bp 1 0.0359742130846275 1 0.144172161817551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137323830 chr9:137323832 synonymous SNV . 0 23 hm5C_associated_SNPs_38801 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:137323819-137323842
64251 chr9 131296128 131296128 1 + G C THCA 131296139 + 131296119 131296159 41 TCCACCCCAGAGTGGGGGACCTCATTCTTGCTCATCTACAT TCCACCCCACAGTGGGGGACCTCATTCTTGCTCATCTACAT < 41bp 1 0.292357508903708 1 0.0578155219554901 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GLE1 ENSG00000119392 CDS Human protein_coding chr9:131296139 chr9:131296128 nonsynonymous SNV 0.998 0 10 hm5C_associated_SNPs_38802 0 0 2 FXR2 POSTAR2 ENCODE chr9:131296099-131296148
64251 chr10 71243586 71243586 1 + T C THCA 71243594 + 71243574 71243614 41 TGGTCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAAC TGGTCTCCTTCACTGGTGTGCTGGCGTCCCTCCGTGACAAC < 41bp 1 0.514146778096065 1 0.336506336927414 experiment 0.97170644380787 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243594 chr10:71243586 nonsynonymous SNV 0.997 1 13 hm5C_associated_SNPs_38803 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243586 71243586 1 + T C THCA 71243598 + 71243578 71243618 41 CTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGT CTCCTTCACTGGTGTGCTGGCGTCCCTCCGTGACAACCTGT < 41bp 1 0.108661842952399 1 0.172040104866028 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243598 chr10:71243586 nonsynonymous SNV 0.997 1 9 hm5C_associated_SNPs_38804 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243586 71243586 1 + T C THCA 71243601 + 71243581 71243621 41 CTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACC CTTCACTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACC < 41bp 1 0.0560846118287794 1 0.132752597332001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243601 chr10:71243586 nonsynonymous SNV 0.997 1 6 hm5C_associated_SNPs_38805 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr10 71243586 71243586 1 + T C THCA 71243606 + 71243586 71243626 41 TTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACCTTCTC CTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACCTTCTC < 41bp 1 0.637728028265707 1 0.64732950925827 experiment 0.724543943468586 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71243606 chr10:71243586 nonsynonymous SNV 0.997 1 1 hm5C_associated_SNPs_38806 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71243572-71243609
64251 chr12 132334395 132334395 1 + C T THCA 132334394 + 132334374 132334414 41 ATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTC ATAACGTAGAGGAAGGATACCTGCGCCCCGTCTCCGACTTC < 41bp 1 0.484282217082249 1 0.0625821352005005 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MMP17 ENSG00000198598 CDS Human protein_coding chr12:132334394 chr12:132334395 nonsynonymous SNV 0.975 4 22 hm5C_associated_SNPs_38807 0 0 1 DDX55 POSTAR2 ENCODE chr12:132334388-132334428
64251 chr21 47754549 47754549 1 + G A THCA 47754537 + 47754517 47754557 41 GTTCACAGTCAGTGACCACCCACCAGAACAGCGTGGGATGT GTTCACAGTCAGTGACCACCCACCAGAACAGCATGGGATGT < 41bp 1 0.639630190210017 1 0.44295808672905 experiment 0.720739619579967 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47754537 chr21:47754549 nonsynonymous SNV 0.028 1 33 hm5C_associated_SNPs_38809 1 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47754540-47754560
64251 chr16 2811731 2811731 1 + G T THCA 2811746 + 2811726 2811766 41 AACTCGGGACCGTTCACCACCTAAGTCTCCCGAGAAACTTC AACTCTGGACCGTTCACCACCTAAGTCTCCCGAGAAACTTC < 41bp 1 0.374291717559517 1 0.167218238115311 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811746 chr16:2811731 nonsynonymous SNV 0.660 0 6 hm5C_associated_SNPs_38811 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2811700-2811780
64251 chrX 153691996 153691996 1 + G T THCA 153692001 + 153691981 153692021 41 GCCTGCCTGGGCTCCGGGGACCCGCACTGTGGTTGGTGTGT GCCTGCCTGGGCTCCTGGGACCCGCACTGTGGTTGGTGTGT < 41bp 1 0.100164118182199 1 0.0980897545814514 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153692001 chrX:153691996 nonsynonymous SNV 0.923 4 16 hm5C_associated_SNPs_38815 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153691953-153691996
64251 chr6 30547740 30547740 1 + G T THCA 30547729 + 30547709 30547749 41 CCGTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG CCGTATCTGAGGAACAGCAGCCTGCACTCAATGGCAAAAAG < 41bp 1 0.0706005369677115 1 0.042596310377121 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547729 chr6:30547740 nonsynonymous SNV 0.907 1 32 hm5C_associated_SNPs_38816 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:30547717-30547742
64251 chr6 30547740 30547740 1 + G T THCA 30547735 + 30547715 30547755 41 CTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAGGGAAAG CTGAGGAACAGCAGCCTGCACTCAATGGCAAAAAGGGAAAG < 41bp 1 0.547540922433471 1 0.528071343898773 experiment 0.904918155133058 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547735 chr6:30547740 nonsynonymous SNV 0.907 1 26 hm5C_associated_SNPs_38817 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:30547717-30547742
64251 chr5 134130604 134130604 1 + C A THCA 134130605 + 134130585 134130625 41 ATGTTTTCAGCTACTTTCCCCAGAGCTATGGAGGCTTTGGC ATGTTTTCAGCTACTTTCCACAGAGCTATGGAGGCTTTGGC < 41bp 1 0.401686689121677 1 0.0960309207439423 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134130605 chr5:134130604 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_38818 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr5:134130578-134130607
64251 chr20 54970759 54970759 1 + C A THCA 54970762 + 54970742 54970782 41 CACCCTCGGAGCAGCTCCTGCATCTCATCAAACTCGGTAGA CACCCTCGGAGCAGCTCATGCATCTCATCAAACTCGGTAGA < 41bp 1 0.244174493840603 1 0.148891389369965 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54970762 chr20:54970759 nonsynonymous SNV 0.999 1 18 hm5C_associated_SNPs_38820 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:54970690-54970760
64251 chr16 4382305 4382305 1 + C A THCA 4382296 + 4382276 4382316 41 CTCACCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCT CTCACCATGCACTCCCTGGACGAGCCGCTAGACCTGAAGCT < 41bp 1 0.327187588929948 1 0.512152791023254 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382296 chr16:4382305 synonymous SNV . 0 30 hm5C_associated_SNPs_38821 0 0 1 YBX3 POSTAR2 ENCODE chr16:4382297-4382381
64251 chr16 4382305 4382305 1 + C A THCA 4382300 + 4382280 4382320 41 CCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGT CCATGCACTCCCTGGACGAGCCGCTAGACCTGAAGCTGAGT < 41bp 1 0.0792271746529381 1 0.0380935072898865 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382300 chr16:4382305 synonymous SNV . 0 26 hm5C_associated_SNPs_38822 0 0 1 YBX3 POSTAR2 ENCODE chr16:4382297-4382381
64251 chr4 79301030 79301030 1 + A G THCA 79301019 + 79300999 79301039 41 CTCCTATTTCATGTTGTGAGCACTCCCACCAATGGTCAGCT CTCCTATTTCATGTTGTGAGCACTCCCACCAGTGGTCAGCT < 41bp 1 0.024219688256073 1 0.0561962723731995 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79301019 chr4:79301030 nonsynonymous SNV 0.997 4 32 hm5C_associated_SNPs_38823 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr4:79301018-79301041
64251 chr17 900397 900397 1 + C A THCA 900378 + 900358 900398 41 GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCAC < 41bp 1 0.559543857757445 1 0.27339106798172 experiment 0.88091228448511 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900378 chr17:900397 synonymous SNV . 0 40 hm5C_associated_SNPs_38824 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:900380-900400
64251 chr6 151646999 151646999 1 + C T THCA 151647007 + 151646987 151647027 41 ACTTAAAATATGCTGGGGACCATCACCATCACAGGTAAGGC ACTTAAAATATGTTGGGGACCATCACCATCACAGGTAAGGC < 41bp 1 0.1546950143397 1 0.105598211288452 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151647007 chr6:151646999 synonymous SNV . 0 13 hm5C_associated_SNPs_38825 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151646977-151647012
64251 chr1 39926406 39926406 1 + G A THCA 39926397 + 39926377 39926417 41 CTCGAGTGATGGATTTCTTCCGGCGCATTGATAAGGACCAG CTCGAGTGATGGATTTCTTCCGGCGCATTAATAAGGACCAG < 41bp 1 0.223287433707381 1 0.828563988208771 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39926397 chr1:39926406 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_38826 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39926379-39926432
64251 chr22 40802633 40802633 1 + C G THCA 40802642 + 40802622 40802662 41 CAGGGCCAGCTCCTGGGGGCCGGCACCCTCACCAACCTCTC CAGGGCCAGCTGCTGGGGGCCGGCACCCTCACCAACCTCTC < 41bp 1 0.679070453192653 1 0.8268803358078 experiment 0.641859093614694 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802642 chr22:40802633 synonymous SNV . 0 12 hm5C_associated_SNPs_38827 0 0 1 DDX24 POSTAR2 ENCODE chr22:40802620-40802663
64251 chr9 133760720 133760720 1 + A C THCA 133760722 + 133760702 133760742 41 CGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT CGAGTGTCTCTTCGGAAACCCCGCCAGCCTCCAGAGCGGAT < 41bp 1 0.0575394229263132 1 0.1010522544384 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760722 chr9:133760720 nonsynonymous SNV 0.998 1 19 hm5C_associated_SNPs_38828 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr9 133760720 133760720 1 + A C THCA 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTCGGAAACCCCGCCAGCCTCCAGAGCGGATCGCCAGC < 41bp 1 0.0146794884004399 1 0.0767748951911926 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760720 nonsynonymous SNV 0.998 1 12 hm5C_associated_SNPs_38829 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr1 150923107 150923107 1 + G T THCA 150923116 + 150923096 150923136 41 CTGTCTGTCTCGAGTCAGACCTATGAGGAATGAGCAGTACC CTGTCTGTCTCTAGTCAGACCTATGAGGAATGAGCAGTACC < 41bp 1 0.159349637602565 1 0.258409321308136 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923116 chr1:150923107 nonsynonymous SNV 0.860 4 12 hm5C_associated_SNPs_38832 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:150923093-150923115
64251 chr7 99159527 99159527 1 + G T THCA 99159535 + 99159515 99159555 41 ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCC ACCTGTTCCTCATGTGCCTGCTCTTCCCCGTGAGGGAAGCC < 41bp 1 0.165164210719012 1 0.0743283629417419 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF655 ENSG00000197343 CDS Human protein_coding chr7:99159535 chr7:99159527 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_38833 0 0 4 SF3A3 POSTAR2 ENCODE chr7:99159432-99159544
64251 chr7 99956642 99956642 1 + C A THCA 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCAGG < 41bp 1 0.508307179705148 1 0.786377429962158 experiment 0.983385640589703 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956642 nonsynonymous SNV 0.000 1 39 hm5C_associated_SNPs_38834 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956642 99956642 1 + C A THCA 99956633 + 99956613 99956653 41 TGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGG TGTATTTCTGCCGAGTCGAGCTGGACACCAGGAGATCAGGG < 41bp 1 0.749321931792777 1 0.752691864967346 experiment 0.501356136414447 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956633 chr7:99956642 nonsynonymous SNV 0.000 1 30 hm5C_associated_SNPs_38835 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956642 99956642 1 + C A THCA 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCGAGTCGAGCTGGACACCAGGAGATCAGGGAGGCA < 41bp 1 0.707040748579164 1 0.110094040632248 experiment 0.585918502841673 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956642 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_38836 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr19 41778032 41778032 1 + C A THCA 41778031 + 41778011 41778051 41 GAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCTCAACTC GAGCACCCACCAGCTTCCTCCAGCCTGAAGCTTCTCAACTC < 41bp 1 0.356177432141097 1 0.223517447710037 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41778031 chr19:41778032 nonsynonymous SNV 0.958 0 22 hm5C_associated_SNPs_38838 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41777989-41778041
64251 chr8 56866442 56866442 1 + A G THCA 56866453 + 56866433 56866473 41 TTAGTCCCAAGCCACAGAAGCCATGGGATAAAGATGCCTGG TTAGTCCCAGGCCACAGAAGCCATGGGATAAAGATGCCTGG < 41bp 1 0.146849212167529 1 0.4024738073349 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56866453 chr8:56866442 nonsynonymous SNV 0.992 1 10 hm5C_associated_SNPs_38839 0 0 1 GPKOW POSTAR2 ENCODE chr8:56866335-56866445
64251 chr6 31516041 31516041 1 + C T THCA 31516048 + 31516028 31516068 41 CCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGAT CCCAGGCCCTCCTTCAGCGACACCCAGGCCTCGATGTAGAT < 41bp 1 0.304031930379181 1 0.0220127105712891 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFKBIL1 ENSG00000204498;ENSG00000213760 CDS Human other chr6:31516048 chr6:31516041 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_38843 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:31516033-31516060
64251 chr6 146875728 146875728 1 + C T THCA 146875716 + 146875696 146875736 41 AGATCAAGAGACCTTGAGAGCAGAGAACAAATCCCAGTGTT AGATCAAGAGACCTTGAGAGCAGAGAACAAATTCCAGTGTT < 41bp 1 0.576235673836754 1 0.772846400737762 experiment 0.847528652326492 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB32 ENSG00000118508 CDS Human protein_coding chr6:146875716 chr6:146875728 nonsynonymous SNV 0.968 2 33 hm5C_associated_SNPs_38844 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:146875703-146875731
64251 chr10 103908243 103908243 1 + C T THCA 103908226 + 103908206 103908246 41 CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCCCCA CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCTCCA < 41bp 1 0.438487629755225 1 0.736812829971313 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908226 chr10:103908243 synonymous SNV . 0 38 hm5C_associated_SNPs_38845 0 0 2 PCBP2 POSTAR2 ENCODE chr10:103908199-103908243
64251 chr18 9182470 9182470 1 + A G THCA 9182456 + 9182436 9182476 41 CAAATCTGGGTTCACAAAACCAATTCAGAGTGAAAATTCTG CAAATCTGGGTTCACAAAACCAATTCAGAGTGAAGATTCTG < 41bp 1 0.0997253881378105 1 0.0444479286670685 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9182456 chr18:9182470 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_38847 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:9182451-9182484
64251 chr6 33243782 33243782 1 + A G THCA 33243772 + 33243752 33243792 41 TGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA TGATCACCATTATGCAGAATCCACGCCAGTGCAAGATCCCA < 41bp 1 0.203253240235643 1 0.0317802131175995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243772 chr6:33243782 nonsynonymous SNV 0.994 4 31 hm5C_associated_SNPs_38848 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr6 33243782 33243782 1 + A G THCA 33243783 + 33243763 33243803 41 ATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTCTT ATGCAGAATCCACGCCAGTGCAAGATCCCAGACTGGTTCTT < 41bp 1 0.774320462805559 1 0.230892360210419 experiment 0.451359074388882 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243783 chr6:33243782 nonsynonymous SNV 0.994 4 20 hm5C_associated_SNPs_38849 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr21 44450162 44450162 1 + C A THCA 44450169 + 44450149 44450189 41 GGTGCCCTGGCCCCTGCCCACATCAGCGGGCTGGTCTTGGA GGTGCCCTGGCCCATGCCCACATCAGCGGGCTGGTCTTGGA < 41bp 1 0.719792854093838 1 0.0634652674198151 experiment 0.560414291812323 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44450169 chr21:44450162 nonsynonymous SNV 0.004 2 14 hm5C_associated_SNPs_38850 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr21:44450143-44450191
64251 chr2 233428968 233428968 1 + C A THCA 233428984 + 233428964 233429004 41 AGTTCTGGAGGTTTTATAGCCACATGGTACGTCCTGGGGAC AGTTATGGAGGTTTTATAGCCACATGGTACGTCCTGGGGAC < 41bp 1 0.759794416622233 1 0.759216666221619 experiment 0.480411166755534 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233428984 chr2:233428968 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_38851 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:233428960-233428980
64251 chr17 30687706 30687706 1 + C A THCA 30687710 + 30687690 30687730 41 TCAGCCACAGCCTGTTCAACCTCAGCAAGGTTATATTCCTC TCAGCCACAGCCTGTTAAACCTCAGCAAGGTTATATTCCTC < 41bp 1 0.71073295371458 1 0.0717876255512238 experiment 0.578534092570839 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687710 chr17:30687706 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_38852 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30687620-30687756
64251 chr7 129102860 129102860 1 + G A THCA 129102845 + 129102825 129102865 41 GAGACGCCATGTGAAATCCTCTACCAGGGAATGCTGTACAG GAGACGCCATGTGAAATCCTCTACCAGGGAATGCTATACAG < 41bp 1 0.332695417122013 1 0.161685049533844 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129102845 chr7:129102860 synonymous SNV . 0 36 hm5C_associated_SNPs_38853 0 0 2 PPIG POSTAR2 ENCODE chr7:129102813-129102870
64251 chr8 104066176 104066176 1 + G A THCA 104066182 + 104066162 104066202 41 TTGTTCTTGATTCAGAGTATCTCGTCACATTACTGGTAGTA TTGTTCTTGATTCAAAGTATCTCGTCACATTACTGGTAGTA < 41bp 1 0.410229315846457 1 0.0582627952098846 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104066182 chr8:104066176 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_38854 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr8:104066148-104066178
64251 chr17 28766044 28766044 1 + G A THCA 28766053 + 28766033 28766073 41 TGTATCCTAATGAATATTTTCCTCATGGAATAACAAATGGA TGTATCCTAATAAATATTTTCCTCATGGAATAACAAATGGA < 41bp 1 0.0852734810491036 1 0.256487131118774 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28766053 chr17:28766044 nonsynonymous SNV 0.999 3 12 hm5C_associated_SNPs_38857 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:28766002-28766078
64251 chr17 28766046 28766046 1 + A T THCA 28766053 + 28766033 28766073 41 TGTATCCTAATGAATATTTTCCTCATGGAATAACAAATGGA TGTATCCTAATGATTATTTTCCTCATGGAATAACAAATGGA < 41bp 1 0.11649182324524 1 0.427544921636581 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28766053 chr17:28766046 nonsynonymous SNV 0.999 3 14 hm5C_associated_SNPs_38858 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:28766002-28766078
64251 chr7 128445518 128445518 1 + G T THCA 128445505 + 128445485 128445525 41 AGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT AGAAATGGATTTCTTAGAGCCTGATCCTGAAATTCAGTTGT < 41bp 1 0.20330708133173 1 0.143092960119247 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445505 chr7:128445518 nonsynonymous SNV 0.946 0 34 hm5C_associated_SNPs_38859 0 0 2 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr7 128445518 128445518 1 + G T THCA 128445510 + 128445490 128445530 41 TGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG TGGATTTCTTAGAGCCTGATCCTGAAATTCAGTTGTTACGG < 41bp 1 0.307363425584042 1 0.342115879058838 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445510 chr7:128445518 nonsynonymous SNV 0.946 0 29 hm5C_associated_SNPs_38860 0 0 2 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr19 13056748 13056748 1 + C T THCA 13056739 + 13056719 13056759 41 GTTGTGTGAGGATCCCGGGGCCGCCGCGTCGCTCGGGCCCC GTTGTGTGAGGATCCCGGGGCCGCCGCGTTGCTCGGGCCCC < 41bp 1 0.407136241341587 1 0.120392233133316 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RAD23A ENSG00000179262 UTR5 Human protein_coding chr19:13056739 chr19:13056748 . . 0 30 hm5C_associated_SNPs_38864 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13056680-13056800
64251 chr7 892493 892493 1 + C A THCA 892492 + 892472 892512 41 CAATTTCTTTTCGTTCTTGCCCGTGTTGAACTGGGCAAGCA CAATTTCTTTTCGTTCTTGCCAGTGTTGAACTGGGCAAGCA < 41bp 1 0.491321418696133 1 0.239092826843262 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SUN1 ENSG00000164828 CDS Human protein_coding chr7:892492 chr7:892493 synonymous SNV . 0 22 hm5C_associated_SNPs_38867 0 0 9 BUD13 POSTAR2 ENCODE chr7:892436-892497
64251 chr9 5656675 5656675 1 + C A THCA 5656689 + 5656669 5656709 41 TAGTACCATGATAGCTGTATCAGTAAGTAGATTTTACCGCT TAGTACAATGATAGCTGTATCAGTAAGTAGATTTTACCGCT < 41bp 1 0.456514960149377 1 0.741575956344604 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RIC1 ENSG00000107036 CDS Human protein_coding chr9:5656689 chr9:5656675 synonymous SNV . 0 7 hm5C_associated_SNPs_38868 0 0 6 NOP56 POSTAR2 GSE43666,GSM1067863 chr9:5656652-5656690
64251 chrX 70347951 70347951 1 + G T THCA 70347944 + 70347924 70347964 41 TGCAATGCCCTTATGCACGTCTGTGTGGGGCACCATGATCC TGCAATGCCCTTATGCACGTCTGTGTGTGGCACCATGATCC < 41bp 1 0.243652849152328 1 0.32761013507843 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70347944 chrX:70347951 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_38869 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70347944-70347963
64251 chr6 18213961 18213961 1 + C A THCA 18213959 + 18213939 18213979 41 ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG ACTTTTTTGGTCACGTTCCTCCAAGTGCCAGCAAGCGAGGG < 41bp 1 0.40997443283848 1 0.888758420944214 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213959 chr6:18213961 synonymous SNV . 0 23 hm5C_associated_SNPs_38870 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr12 6493845 6493845 1 + C A THCA 6493838 + 6493818 6493858 41 AGCACCGCATCTGCTGCTCCCGCTGCCCGCCAGGTGAGAGG AGCACCGCATCTGCTGCTCCCGCTGCCAGCCAGGTGAGAGG < 41bp 1 0.32909159823095 1 0.296728640794754 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LTBR ENSG00000111321 CDS Human protein_coding chr12:6493838 chr12:6493845 nonsynonymous SNV 0.997 2 28 hm5C_associated_SNPs_38871 0 0 2 PPIG POSTAR2 ENCODE chr12:6493775-6493851
64251 chr21 47836433 47836433 1 + C A THCA 47836431 + 47836411 47836451 41 GACCAGCGTACTTGGTGGCTCCCGCCACCAGAGCCACACTG GACCAGCGTACTTGGTGGCTCCAGCCACCAGAGCCACACTG < 41bp 1 0.0990230526320132 1 0.696456968784332 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47836431 chr21:47836433 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_38872 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:47836369-47836441
64251 chr2 36668427 36668427 1 + C A THCA 36668446 + 36668426 36668466 41 CCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT CAGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT < 41bp 1 0.617393979039806 1 0.770872712135315 experiment 0.765212041920387 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668446 chr2:36668427 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_38873 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:36668419-36668457
64251 chr9 35733109 35733109 1 + C A THCA 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGACCACACCTACTCACTCCCACGGGAAACTGTCTCTAT < 41bp 1 0.184368610900871 1 0.155895680189133 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733109 synonymous SNV . 0 18 hm5C_associated_SNPs_38874 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733109 35733109 1 + C A THCA 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGACCACACCTACTCACTCCCACGGGAAACTGTCTCTATG < 41bp 1 0.174215100115541 1 0.154773235321045 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733109 synonymous SNV . 0 17 hm5C_associated_SNPs_38875 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr2 62934336 62934336 1 + G T THCA 62934334 + 62934314 62934354 41 TTGACTGATCATCATGGCTTCAGTTTGGAAGAGACTGCAGC TTGACTGATCATCATGGCTTCATTTTGGAAGAGACTGCAGC < 41bp 1 0.0315076606881325 1 0.0357182323932648 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EHBP1 ENSG00000115504 CDS Human protein_coding chr2:62934334 chr2:62934336 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_38876 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:62934273-62934347
64251 chr5 54456042 54456042 1 + C T THCA 54456062 + 54456042 54456082 41 CCGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT TCGCTAAAATGTTCCGGGCCCAGAGCAAAGGTATTTGCAGT < 41bp 1 0.517232264013849 1 0.45128333568573 experiment 0.965535471972301 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456062 chr5:54456042 nonsynonymous SNV 0.989 0 1 hm5C_associated_SNPs_38877 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr5:54456009-54456042
64251 chr4 57340538 57340538 1 + A C THCA 57340545 + 57340525 57340565 41 ACCAGGCCATGAAAATCCTACAAAAAGCTGAAGGTTGGAAG ACCAGGCCATGAACATCCTACAAAAAGCTGAAGGTTGGAAG < 41bp 1 0.552699898325172 1 0.321429371833801 experiment 0.894600203349656 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340545 chr4:57340538 nonsynonymous SNV 0.998 1 14 hm5C_associated_SNPs_38880 0 0 4 GRWD1 POSTAR2 ENCODE chr4:57340494-57340538
64251 chr1 180849246 180849246 1 + G A THCA 180849252 + 180849232 180849272 41 TCCGCCTGGAGAATGAACATCTGAATAACTGTGGTGAATTC TCCGCCTGGAGAATAAACATCTGAATAACTGTGGTGAATTC < 41bp 1 0.652181720440438 1 0.280246138572693 experiment 0.695636559119124 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XPR1 ENSG00000143324 CDS Human protein_coding chr1:180849252 chr1:180849246 nonsynonymous SNV 0.993 4 15 hm5C_associated_SNPs_38882 0 0 8 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:180849212-180849262
64251 chrX 135106617 135106617 1 + G C THCA 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTGGTGGTGGCACCACTCCAATGCTGTCATGCTT < 41bp 1 0.123491308550724 1 0.793520569801331 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106617 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_38883 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135106597-135106625
64251 chr20 25198164 25198164 1 + C T THCA 25198155 + 25198135 25198175 41 CAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC CAGGGCACCCTGCAGGCCTCCCCACCCGGTTACCTGACGGC < 41bp 1 0.100962772680432 1 0.146734446287155 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25198155 chr20:25198164 synonymous SNV . 0 30 hm5C_associated_SNPs_38884 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:25198163-25198185
64251 chr18 13056651 13056651 1 + A G THCA 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTGTTGGTACGAACTGTGGAATTGAACCAT < 41bp 1 0.133357237116094 1 0.346521526575089 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056651 synonymous SNV . 0 22 hm5C_associated_SNPs_38886 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr18 13056651 13056651 1 + A G THCA 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTGTTGGTACGAACTGTGGAATTGAACCATGGGA < 41bp 1 0.235013255688004 1 0.139818996191025 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056651 synonymous SNV . 0 18 hm5C_associated_SNPs_38887 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr14 75190043 75190043 1 + C G THCA 75190025 + 75190005 75190045 41 CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTA CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTGTA < 41bp 1 0.696251664546681 1 0.156184643507004 experiment 0.607496670906638 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCF1 ENSG00000119616 CDS Human protein_coding chr14:75190025 chr14:75190043 nonsynonymous SNV 0.993 4 39 hm5C_associated_SNPs_38888 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr14:75189981-75190044
64251 chr13 27216438 27216438 1 + C A THCA 27216436 + 27216416 27216456 41 AGTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAG AGTGAAGAGGAACATTGAGCCCAGGCACTTGTGCCGGGGAG < 41bp 1 0.439681088626314 1 0.574100971221924 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216436 chr13:27216438 synonymous SNV . 0 23 hm5C_associated_SNPs_38896 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216438 27216438 1 + C A THCA 27216437 + 27216417 27216457 41 GTGAAGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGC GTGAAGAGGAACATTGAGCCCAGGCACTTGTGCCGGGGAGC < 41bp 1 0.465123639395356 1 0.750207424163818 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216437 chr13:27216438 synonymous SNV . 0 22 hm5C_associated_SNPs_38897 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216438 27216438 1 + C A THCA 27216441 + 27216421 27216461 41 AGAGGAACATTGAGCCCCGGCACTTGTGCCGGGGAGCTCTG AGAGGAACATTGAGCCCAGGCACTTGTGCCGGGGAGCTCTG < 41bp 1 0.30998826463998 1 0.0748462378978729 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216441 chr13:27216438 synonymous SNV . 0 18 hm5C_associated_SNPs_38898 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr13 27216438 27216438 1 + C A THCA 27216450 + 27216430 27216470 41 TTGAGCCCCGGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG TTGAGCCCAGGCACTTGTGCCGGGGAGCTCTGCCTGAAGGG < 41bp 1 0.754218807960413 1 0.87858384847641 experiment 0.491562384079175 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WASF3 ENSG00000132970 CDS Human protein_coding chr13:27216450 chr13:27216438 synonymous SNV . 0 9 hm5C_associated_SNPs_38899 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:27216425-27216465
64251 chr9 37429743 37429743 1 + C A THCA 37429725 + 37429705 37429745 41 AGACATGGACTCTCCTTGCTCTAGGCCAGGCCATTGCTCGG AGACATGGACTCTCCTTGCTCTAGGCCAGGCCATTGCTAGG < 41bp 1 0.769481100001653 1 0.934961438179016 experiment 0.461037799996694 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37429725 chr9:37429743 synonymous SNV . 0 39 hm5C_associated_SNPs_38901 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:37429736-37429765
64251 chr9 79996933 79996933 1 + G T THCA 79996920 + 79996900 79996940 41 AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTC AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCTGTTCTTC < 41bp 1 0.456837402052805 1 0.568571746349335 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS13A ENSG00000197969 CDS Human protein_coding chr9:79996920 chr9:79996933 nonsynonymous SNV 0.993 2 34 hm5C_associated_SNPs_38902 0 0 1 EIF3H POSTAR2 ENCODE chr9:79996893-79996995
64251 chr11 831585 831585 1 + G T THCA 831584 + 831564 831604 41 GGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG GGGACGCCTGCGAGGCCAGGCTGGCGGGCAGCAGCTGCAGG < 41bp 1 0.598300097173699 1 0.279889464378357 experiment 0.803399805652601 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831584 chr11:831585 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_38903 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:831575-831615
64251 chr21 45546831 45546831 1 + C A THCA 45546824 + 45546804 45546844 41 AAACCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC AAACCTGAGATCAGGGTGACCTCACTCAGCTTCTCTCCCAC < 41bp 1 0.382506590958202 1 0.148713082075119 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45546824 chr21:45546831 nonsynonymous SNV 0.525 1 28 hm5C_associated_SNPs_38905 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45546810-45546844
64251 chr19 19217123 19217123 1 + A G THCA 19217131 + 19217111 19217151 41 CGCACTGGCTGGAACGACAGCCGCTTCACTGACCTACCCCC CGCACTGGCTGGGACGACAGCCGCTTCACTGACCTACCCCC < 41bp 1 0.298823101345865 1 0.13551539182663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19217131 chr19:19217123 synonymous SNV . 0 13 hm5C_associated_SNPs_38906 0 0 1 PRPF8 POSTAR2 ENCODE chr19:19217083-19217157
64251 chr5 132400700 132400700 1 + C T THCA 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TTGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC < 41bp 1 0.455104515098049 1 0.434033215045929 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400700 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_38907 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:132400680-132400700
64251 chr22 37420724 37420724 1 + T C THCA 37420712 + 37420692 37420732 41 AAGAGCCAACCTGCTCCCGCCGAGTTCCGCGCTCAGCTCGA AAGAGCCAACCTGCTCCCGCCGAGTTCCGCGCCCAGCTCGA < 41bp 1 0.434029322794821 1 0.487776041030884 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37420712 chr22:37420724 synonymous SNV . 0 33 hm5C_associated_SNPs_38908 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:37420715-37420748
64251 chr6 26252031 26252031 1 + C A THCA 26252046 + 26252026 26252066 41 CACCCCGACACCGGCATCTCCTCCAAAGCCATGGGGATCAT CACCCAGACACCGGCATCTCCTCCAAAGCCATGGGGATCAT < 41bp 1 0.795726654546922 1 0.96895968914032 experiment 0.408546690906157 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HIST1H2BH ENSG00000197459 CDS Human other chr6:26252046 chr6:26252031 synonymous SNV . 0 6 hm5C_associated_SNPs_38924 0 0 2 SND1 POSTAR2 ENCODE chr6:26251991-26252071
64251 chr6 26598831 26598831 1 + C A THCA 26598851 + 26598831 26598871 41 CTCAGAGAGCATGGAGGGACCTTCCCTTGTCAGGGACTCCT ATCAGAGAGCATGGAGGGACCTTCCCTTGTCAGGGACTCCT < 41bp 1 0.327029868833035 1 0.0657853186130524 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598851 chr6:26598831 synonymous SNV . 0 1 hm5C_associated_SNPs_38925 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr17 38318284 38318284 1 + G A THCA 38318298 + 38318278 38318318 41 CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG CAAAGTAGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG < 41bp 1 0.225063970435597 1 0.0674554705619812 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318298 chr17:38318284 synonymous SNV . 0 7 hm5C_associated_SNPs_38927 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38318262-38318304
64251 chr17 38318284 38318284 1 + G A THCA 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TAGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT < 41bp 1 0.118964175573411 1 0.144172608852386 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318284 synonymous SNV . 0 2 hm5C_associated_SNPs_38928 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38318262-38318304
64251 chr17 76167692 76167692 1 + G A THCA 76167712 + 76167692 76167732 41 GCAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGT ACAGCCATCACCTTCAGCTTCTTTTCCATCTTCTCCTGGGT < 41bp 1 0.0473730642336691 1 0.0306771099567413 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167712 chr17:76167692 nonsynonymous SNV 0.839 4 1 hm5C_associated_SNPs_38929 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:76167680-76167708
64251 chr11 831564 831564 1 + G A THCA 831584 + 831564 831604 41 GGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG AGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGG < 41bp 1 0.655221245456246 1 0.757037699222565 experiment 0.689557509087507 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:831584 chr11:831564 nonsynonymous SNV 0.299 0 1 hm5C_associated_SNPs_38930 0 0 8 BUD13 POSTAR2 ENCODE chr11:831536-831580
64251 chr1 120286533 120286533 1 + G T THCA 120286513 + 120286493 120286533 41 TTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCG TTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCT < 41bp 1 0.165350043776873 1 0.232030689716339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286513 chr1:120286533 nonsynonymous SNV 0.997 3 41 hm5C_associated_SNPs_38931 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286514 + 120286494 120286534 41 TTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGG TTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCTG < 41bp 1 0.448300640736089 1 0.187060207128525 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286514 chr1:120286533 nonsynonymous SNV 0.997 3 40 hm5C_associated_SNPs_38932 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286518 + 120286498 120286538 41 TCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGGCTGC TCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCTGCTGC < 41bp 1 0.667656801383117 1 0.914733409881592 experiment 0.664686397233767 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286518 chr1:120286533 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_38933 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286535 + 120286515 120286555 41 TGGCAGAGGCAGGCGTGCGGCTGCTGTCCTACCAGACTTCA TGGCAGAGGCAGGCGTGCTGCTGCTGTCCTACCAGACTTCA < 41bp 1 0.633097195975526 1 0.598633706569672 experiment 0.733805608048948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286535 chr1:120286533 nonsynonymous SNV 0.997 3 19 hm5C_associated_SNPs_38934 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286542 + 120286522 120286562 41 GGCAGGCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGT GGCAGGCGTGCTGCTGCTGTCCTACCAGACTTCACTGGTGT < 41bp 1 0.0637607198805155 1 0.215826004743576 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286542 chr1:120286533 nonsynonymous SNV 0.997 3 12 hm5C_associated_SNPs_38935 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286543 + 120286523 120286563 41 GCAGGCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGTC GCAGGCGTGCTGCTGCTGTCCTACCAGACTTCACTGGTGTC < 41bp 1 0.309630540336428 1 0.296985745429993 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286543 chr1:120286533 nonsynonymous SNV 0.997 3 11 hm5C_associated_SNPs_38936 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286547 + 120286527 120286567 41 GCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGAT GCGTGCTGCTGCTGTCCTACCAGACTTCACTGGTGTCAGAT < 41bp 1 0.522094546702813 1 0.718738734722137 experiment 0.955810906594374 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286547 chr1:120286533 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_38937 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286533 120286533 1 + G T THCA 120286551 + 120286531 120286571 41 GCGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGATGGGG GCTGCTGCTGTCCTACCAGACTTCACTGGTGTCAGATGGGG < 41bp 1 0.502266370465684 1 0.54152250289917 experiment 0.995467259068632 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286551 chr1:120286533 nonsynonymous SNV 0.997 3 3 hm5C_associated_SNPs_38938 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr17 37360844 37360844 1 + G A THCA 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGCGCCTCCAAGCCAAGAAGGAGGAGATCATCA < 41bp 1 0.379960607136439 1 0.480041444301605 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360844 synonymous SNV . 0 19 hm5C_associated_SNPs_38939 0 0 35 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360844 37360844 1 + G A THCA 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAAGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA < 41bp 1 0.50563949506332 1 0.147246956825256 experiment 0.988721009873361 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360844 synonymous SNV . 0 3 hm5C_associated_SNPs_38940 0 0 35 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr11 65063436 65063436 1 + C A THCA 65063444 + 65063424 65063464 41 TCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAAGGTA TCCTCATCATCCAGTCAGAGCTGAGGTACTTCGTGAAGGTA < 41bp 1 0.318729301114236 1 0.152889162302017 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65063444 chr11:65063436 nonsynonymous SNV 0.327 4 13 hm5C_associated_SNPs_38941 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:65063423-65063446
64251 chr19 42373229 42373229 1 + C A THCA 42373215 + 42373195 42373235 41 CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCCGCCGGG CAGCCACTTCAGCCGAGGCTCCAAGAGTGTGGCCAGCCGGG < 41bp 1 0.231859776357773 1 0.18306577205658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373215 chr19:42373229 nonsynonymous SNV 0.971 2 35 hm5C_associated_SNPs_38942 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373229 42373229 1 + C A THCA 42373228 + 42373208 42373248 41 CGAGGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT CGAGGCTCCAAGAGTGTGGCCAGCCGGGTCCTCCAAGCCCT < 41bp 1 0.524905336825527 1 0.108057767152786 experiment 0.950189326348947 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373228 chr19:42373229 nonsynonymous SNV 0.971 2 22 hm5C_associated_SNPs_38943 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373229 42373229 1 + C A THCA 42373231 + 42373211 42373251 41 GGCTCCAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGA GGCTCCAAGAGTGTGGCCAGCCGGGTCCTCCAAGCCCTGGA < 41bp 1 0.640898358584811 1 0.629151046276093 experiment 0.718203282830377 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373231 chr19:42373229 nonsynonymous SNV 0.971 2 19 hm5C_associated_SNPs_38944 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373229 42373229 1 + C A THCA 42373237 + 42373217 42373257 41 AAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCTGGAGGGGCT AAGAGTGTGGCCAGCCGGGTCCTCCAAGCCCTGGAGGGGCT < 41bp 1 0.0490418234917364 1 0.128535807132721 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373237 chr19:42373229 nonsynonymous SNV 0.971 2 13 hm5C_associated_SNPs_38945 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr11 108196147 108196147 1 + C T THCA 108196145 + 108196125 108196165 41 GAGCCTATCATGGCTCTACGCACAGTCATTTTGGAGATCCT GAGCCTATCATGGCTCTACGCATAGTCATTTTGGAGATCCT < 41bp 1 0.123198033574516 1 0.17338690161705 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108196145 chr11:108196147 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_38946 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:108196131-108196170
64251 chr6 32134709 32134709 1 + G A THCA 32134701 + 32134681 32134721 41 CCTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTC CCTCAGCCATCTGCGCCAAGCCTTGCCTAAACGGAGGCGTC < 41bp 1 0.0548343131209463 1 0.0493583381175995 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134701 chr6:32134709 synonymous SNV . 0 29 hm5C_associated_SNPs_38958 0 0 4 DDX24 POSTAR2 ENCODE chr6:32134708-32134756
64251 chr6 32134709 32134709 1 + G A THCA 32134702 + 32134682 32134722 41 CTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTCT CTCAGCCATCTGCGCCAAGCCTTGCCTAAACGGAGGCGTCT < 41bp 1 0.195635745102084 1 0.0839748084545135 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134702 chr6:32134709 synonymous SNV . 0 28 hm5C_associated_SNPs_38959 0 0 4 DDX24 POSTAR2 ENCODE chr6:32134708-32134756
64251 chr19 17887069 17887069 1 + G T THYM 17887060 + 17887040 17887080 41 CCCACTTTGTCCACAGGGCACCATGAAACGCCATTCTTCAC CCCACTTTGTCCACAGGGCACCATGAAACTCCATTCTTCAC < 41bp 1 0.0554993991516562 1 0.0338121056556702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887060 chr19:17887069 nonsynonymous SNV 0.996 2 30 hm5C_associated_SNPs_38961 0 0 2 PRPF8 POSTAR2 ENCODE chr19:17887023-17887085
64251 chr19 58758153 58758153 1 + C T THYM 58758154 + 58758134 58758174 41 GCAGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCT GCAGGGCAGAGCAGGAGGCTCCCCGAGGTAAGAGCAGACCT < 41bp 1 0.507226173068039 1 0.44049260020256 experiment 0.985547653863922 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758154 chr19:58758153 nonsynonymous SNV 0.039 0 20 hm5C_associated_SNPs_38963 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr19 58758153 58758153 1 + C T THYM 58758156 + 58758136 58758176 41 AGGGCAGAGCAGGAGGCCCCCCGAGGTAAGAGCAGACCTTG AGGGCAGAGCAGGAGGCTCCCCGAGGTAAGAGCAGACCTTG < 41bp 1 0.661915133057184 1 0.780479669570923 experiment 0.676169733885633 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58758156 chr19:58758153 nonsynonymous SNV 0.039 0 18 hm5C_associated_SNPs_38964 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58758121-58758158
64251 chr10 75871847 75871847 1 + G T THYM 75871841 + 75871821 75871861 41 TGGCCGCGGCTCAGTCCTTGCATCGGGAAGCTACCAAGTGG TGGCCGCGGCTCAGTCCTTGCATCGGTAAGCTACCAAGTGG < 41bp 1 0.407896640558421 1 0.205536723136902 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871841 chr10:75871847 stopgain 1.000 1 27 hm5C_associated_SNPs_38965 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:75871841-75871855
64251 chrX 48417377 48417377 1 + G A THYM 48417383 + 48417363 48417403 41 CATCACTGACGACTGCCGCCCTGCCCTTTACACAGTCCATC CATCACTGACGACTACCGCCCTGCCCTTTACACAGTCCATC < 41bp 1 0.177782809639994 1 0.0201200246810913 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48417383 chrX:48417377 nonsynonymous SNV 0.981 1 15 hm5C_associated_SNPs_38966 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:48417364-48417380
64251 chr17 73814808 73814808 1 + C T THYM 73814827 + 73814807 73814847 41 CCTAGCCCAGTGGGCACCAGCAGCGTCCCCGGCATGAATGC CTTAGCCCAGTGGGCACCAGCAGCGTCCCCGGCATGAATGC < 41bp 1 0.716533259016475 1 0.362983345985413 experiment 0.566933481967051 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73814827 chr17:73814808 nonsynonymous SNV 0.999 3 2 hm5C_associated_SNPs_38967 0 0 3 PPIG POSTAR2 ENCODE chr17:73814779-73814810
64251 chr1 150297442 150297442 1 + G T THYM 150297437 + 150297417 150297457 41 GGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTG GGGAGCTGGATGAGCTGAAACCATGTATAGAGAAGACAGTG < 41bp 1 0.315069739685061 1 0.159809052944183 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150297437 chr1:150297442 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_38969 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:150297399-150297477
64251 chr1 168014221 168014221 1 + G T THYM 168014224 + 168014204 168014244 41 TTGATCGCTCTTGTGGGGTTCCAGAAGAATCTGCTTCATCT TTGATCGCTCTTGTGGGTTTCCAGAAGAATCTGCTTCATCT < 41bp 1 0.515197338061415 1 0.696455001831055 experiment 0.96960532387717 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014224 chr1:168014221 nonsynonymous SNV 0.965 1 18 hm5C_associated_SNPs_38970 0 0 4 GRWD1 POSTAR2 ENCODE chr1:168014221-168014295
64251 chr17 79414094 79414094 1 + G T THYM 79414114 + 79414094 79414134 41 GGCCTGGGCTTCTCCCTACCCTCAGACGTGCACTCTTCTAA TGCCTGGGCTTCTCCCTACCCTCAGACGTGCACTCTTCTAA < 41bp 1 0.294486728680873 1 0.520003080368042 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHCC1 ENSG00000171282 CDS Human other chr17:79414114 chr17:79414094 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_38971 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:79414088-79414109
64251 chr11 61488195 61488195 1 + C T THYM 61488204 + 61488184 61488224 41 GGTCTATAACCCGCACGAGGCCTGCTCCCTGAACCTGGTGG GGTCTATAACCTGCACGAGGCCTGCTCCCTGAACCTGGTGG < 41bp 1 0.0401930970356545 1 0.0167202055454254 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61488204 chr11:61488195 nonsynonymous SNV 0.949 1 12 hm5C_associated_SNPs_38972 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61488172-61488196
64251 chr19 50339175 50339175 1 + G T THYM 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTTCGAAGCC < 41bp 1 0.016946517223324 1 0.0293571650981903 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339175 synonymous SNV 0.992 0 34 hm5C_associated_SNPs_38973 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339175 50339175 1 + G T THYM 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTTCGAAGCCT < 41bp 1 0.121937133283748 1 0.0454345345497131 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339175 synonymous SNV 0.992 0 33 hm5C_associated_SNPs_38974 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr2 173352764 173352764 1 + G T THYM 173352763 + 173352743 173352783 41 TGAACTGCTTTTATCGGTCTCGGGGTAAGTGTTTGTGTTTA TGAACTGCTTTTATCGGTCTCTGGGTAAGTGTTTGTGTTTA < 41bp 1 0.628844875652239 1 0.720859706401825 experiment 0.742310248695522 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173352763 chr2:173352764 synonymous SNV . 0 22 hm5C_associated_SNPs_38975 0 0 1 PRPF8 POSTAR2 ENCODE chr2:173352743-173352800
64251 chr4 183601746 183601746 1 + T C THYM 183601733 + 183601713 183601753 41 TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCTGCCTGTG TGTAGTGGCAACGGGCAGTACTCCAAGGGCCGCCGCCTGTG < 41bp 1 0.797701247996779 1 0.986995100975037 experiment 0.404597504006443 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control TENM3 ENSG00000218336 CDS Human protein_coding chr4:183601733 chr4:183601746 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_38976 0 0 4 TAF15 POSTAR2 SRX029345 chr4:183601740-183601760
64251 chr6 7579946 7579946 1 + A T THYM 7579952 + 7579932 7579972 41 AGATTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC AGATTGAAAGGTTGTGGGTTCTACTGCAGGAAGAAGGCACC < 41bp 1 0.204124383572623 1 0.296946465969086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579952 chr6:7579946 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_38977 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr6:7579927-7579961
64251 chr15 96875650 96875650 1 + A C THYM 96875664 + 96875644 96875684 41 AAGCGCAGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC AAGCGCCGCGTGCGGAGGAACCTGAGCTACACGTGCCGCGC < 41bp 1 0.515078014193275 1 0.437462896108627 experiment 0.969843971613449 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875664 chr15:96875650 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_38978 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:96875640-96875660
64251 chr7 150817216 150817216 1 + G T THYM 150817203 + 150817183 150817223 41 CCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAAC CCCCCACACCCATCCGAAAGCAGTCCAAGCGGCTCTCCAAC < 41bp 1 0.13555825250651 1 0.859744012355804 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150817203 chr7:150817216 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_38979 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150817205-150817232
64251 chr1 10231345 10231345 1 + G T THYM 10231351 + 10231331 10231371 41 GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGC GATATTTACTTACATCTGGACTGTGCTCGGTTCGCGAAAGC < 41bp 1 0.227663848847563 1 0.107023864984512 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10231351 chr1:10231345 nonsynonymous SNV 0.995 1 15 hm5C_associated_SNPs_38981 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr1:10231331-10231355
64251 chr3 39126157 39126157 1 + G A THYM 39126143 + 39126123 39126163 41 TTTCTTTTGATAGATGTTAACTATTACTTTGGATGAAAGTG TTTCTTTTGATAGATGTTAACTATTACTTTGGATAAAAGTG < 41bp 1 0.0952188238910857 1 0.104188770055771 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR48 ENSG00000114742 CDS Human protein_coding chr3:39126143 chr3:39126157 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_38982 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:39126154-39126184
64251 chr8 21851902 21851902 1 + T C THYM 21851912 + 21851892 21851932 41 GTAAGAGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAA GTAAGAGACCCGAGAGGGATCGCTTTCGCTTTCAATGCCAA < 41bp 1 0.22407279406258 1 0.137778371572495 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21851912 chr8:21851902 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_38983 0 0 2 SMNDC1 POSTAR2 ENCODE chr8:21851853-21851904
64251 chr19 11141493 11141493 1 + G A THYM 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCAGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC < 41bp 1 0.434340924985639 1 0.586839556694031 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141493 nonsynonymous SNV 0.918 4 8 hm5C_associated_SNPs_38984 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:11141477-11141510
64251 chr17 48746581 48746581 1 + C T THYM 48746567 + 48746547 48746587 41 CCTGTGGGCTGTGGGAAGTCCTCCCTGGTGTCTGCCCTGCT CCTGTGGGCTGTGGGAAGTCCTCCCTGGTGTCTGTCCTGCT < 41bp 1 0.351331634701047 1 0.859007596969604 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48746567 chr17:48746581 nonsynonymous SNV 0.997 5 35 hm5C_associated_SNPs_38985 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:48746580-48746600
64251 chr11 988600 988600 1 + G A THYM 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTACACCATGTGCGACCGC < 41bp 1 0.707956294257772 1 0.529295742511749 experiment 0.584087411484456 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988600 nonsynonymous SNV 0.992 4 27 hm5C_associated_SNPs_38986 0 0 7 BUD13 POSTAR2 ENCODE chr11:988551-988606
64251 chr22 44379823 44379823 1 + G T THYM 44379837 + 44379817 44379857 41 TACCTTGGGGGACCCACAAGCATCCGCGGATTCAGCATGCA TACCTTTGGGGACCCACAAGCATCCGCGGATTCAGCATGCA < 41bp 1 0.204078801337514 1 0.375349313020706 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379837 chr22:44379823 nonsynonymous SNV 0.024 4 7 hm5C_associated_SNPs_38987 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr11 47600859 47600859 1 + C T THYM 47600875 + 47600855 47600895 41 GAGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATG GAGGTGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATG < 41bp 1 0.0851340429118119 1 0.126849859952927 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600875 chr11:47600859 nonsynonymous SNV 0.824 1 5 hm5C_associated_SNPs_38988 0 0 11 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600859 47600859 1 + C T THYM 47600876 + 47600856 47600896 41 AGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGT AGGTGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGT < 41bp 1 0.79472571620742 1 0.307494342327118 experiment 0.410548567585159 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600876 chr11:47600859 nonsynonymous SNV 0.824 1 4 hm5C_associated_SNPs_38989 0 0 11 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr17 43214063 43214063 1 + G T THYM 43214071 + 43214051 43214091 41 GCCCCCAGGGACGCCTGGAACAGTCTGGGCAAGATGAGCAG GCCCCCAGGGACTCCTGGAACAGTCTGGGCAAGATGAGCAG < 41bp 1 0.554504719184913 1 0.237606257200241 experiment 0.890990561630174 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43214071 chr17:43214063 nonsynonymous SNV 0.986 4 13 hm5C_associated_SNPs_38990 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:43214060-43214080
64251 chr16 2815546 2815546 1 + A G THYM 2815529 + 2815509 2815549 41 ACATCCGCCCAAATCCAGAACTGCTCGCAGAGGTTCCAGGT ACATCCGCCCAAATCCAGAACTGCTCGCAGAGGTTCCGGGT < 41bp 1 0.173993471752447 1 0.107635676860809 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815529 chr16:2815546 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_38992 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2815480-2815580
64251 chr2 100009524 100009524 1 + T G THYM 100009522 + 100009502 100009542 41 ACATTGGCTGGTTTACCCCTCCTTGTGGCTTATAAAGAAGA ACATTGGCTGGTTTACCCCTCCGTGTGGCTTATAAAGAAGA < 41bp 1 0.130814422929175 1 0.485038697719574 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100009522 chr2:100009524 nonsynonymous SNV 0.926 2 23 hm5C_associated_SNPs_38993 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:100009501-100009554
64251 chr9 134354747 134354747 1 + C A THYM 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGACCGTGCCTGGCAGCAGCATGGGCACTGAGATCTG < 41bp 1 0.680276253056633 1 0.846490979194641 experiment 0.639447493886735 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354747 nonsynonymous SNV 0.835 3 25 hm5C_associated_SNPs_38994 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr15 64424072 64424072 1 + G A THYM 64424067 + 64424047 64424087 41 GCTGAGCTCCTGAGTGACTACATTCGCCTCCTGGCCATAGT GCTGAGCTCCTGAGTGACTACATTCACCTCCTGGCCATAGT < 41bp 1 0.0673662944929464 1 0.0652013421058655 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64424067 chr15:64424072 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_38995 0 0 6 GRWD1 POSTAR2 ENCODE chr15:64424039-64424096
64251 chr19 54969669 54969669 1 + C T THYM 54969650 + 54969630 54969670 41 ATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGCG ATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGTG < 41bp 1 0.44002775135332 1 0.158449918031693 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969650 chr19:54969669 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_38996 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr19 54969669 54969669 1 + C T THYM 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGTGCAAGGTCGCCCTCAAGGCCATGATCAAAAC < 41bp 1 0.131683868152986 1 0.200230777263641 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969669 nonsynonymous SNV 0.999 4 10 hm5C_associated_SNPs_38997 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr11 66627141 66627141 1 + G T THYM 66627122 + 66627102 66627142 41 CTGCAGGATTGTCCCAGCCTCCAGCCACCACTTCCTGCTGA CTGCAGGATTGTCCCAGCCTCCAGCCACCACTTCCTGCTTA < 41bp 1 0.210709927530226 1 0.455601066350937 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627122 chr11:66627141 synonymous SNV . 0 40 hm5C_associated_SNPs_38999 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66627112-66627279
64251 chr11 66627141 66627141 1 + G T THYM 66627129 + 66627109 66627149 41 ATTGTCCCAGCCTCCAGCCACCACTTCCTGCTGAAGCACCT ATTGTCCCAGCCTCCAGCCACCACTTCCTGCTTAAGCACCT < 41bp 1 0.0754837564240763 1 0.0474924147129059 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627129 chr11:66627141 synonymous SNV . 0 33 hm5C_associated_SNPs_39000 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66627112-66627279
64251 chr8 77619808 77619808 1 + G T THYM 77619825 + 77619805 77619845 41 TCCGGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC TCCTGCTTGCCAGTGGTCAGCTAATGGGTGATGACCTGTCC < 41bp 1 0.21021137037411 1 0.496863484382629 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77619825 chr8:77619808 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_39001 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:77619801-77619830
64251 chr1 154248118 154248118 1 + C G THYM 154248129 + 154248109 154248149 41 CCTCCAGCCCTGGATGATGCCTTTTCCATCCTGGACTTATT CCTCCAGCCGTGGATGATGCCTTTTCCATCCTGGACTTATT < 41bp 1 0.0943439604532753 1 0.0476617515087128 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAX1 ENSG00000143575 CDS Human protein_coding chr1:154248129 chr1:154248118 nonsynonymous SNV 0.579 3 10 hm5C_associated_SNPs_39002 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154248091-154248179
64251 chr9 96026294 96026294 1 + C A THYM 96026292 + 96026272 96026312 41 TCGACTTGGACGGGGACGCACCCGATGAAATTGCCACGTAT TCGACTTGGACGGGGACGCACCAGATGAAATTGCCACGTAT < 41bp 1 0.39794700882281 1 0.464355558156967 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96026292 chr9:96026294 synonymous SNV . 0 23 hm5C_associated_SNPs_39004 0 0 3 PPIG POSTAR2 ENCODE chr9:96026269-96026308
64251 chr19 10886517 10886517 1 + C T THYM 10886497 + 10886477 10886517 41 CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAC CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAT < 41bp 1 0.189544017457159 1 0.140782833099365 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886497 chr19:10886517 nonsynonymous SNV 0.225 5 41 hm5C_associated_SNPs_39006 0 0 11 FXR2 POSTAR2 GSE39682,GSM977620 chr19:10886499-10886518
64251 chr22 35719878 35719878 1 + G T THYM 35719884 + 35719864 35719904 41 CCATACTCTCCGGTGACACGCCCATAGCACCAACCCCGGAA CCATACTCTCCGGTTACACGCCCATAGCACCAACCCCGGAA < 41bp 1 0.175498585644198 1 0.132213473320007 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719884 chr22:35719878 nonsynonymous SNV 0.070 2 15 hm5C_associated_SNPs_39007 0 0 1 EFTUD2 POSTAR2 ENCODE chr22:35719822-35719897
64251 chr16 50655550 50655550 1 + C T THYM 50655547 + 50655527 50655567 41 GAGAAGACTGACGGGCTGGGCAGCGGAGATGAGAAGAAGAT GAGAAGACTGACGGGCTGGGCAGTGGAGATGAGAAGAAGAT < 41bp 1 0.273015982273613 1 0.464475333690643 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NKD1 ENSG00000140807 CDS Human protein_coding chr16:50655547 chr16:50655550 synonymous SNV . 0 24 hm5C_associated_SNPs_39008 0 0 8 BUD13 POSTAR2 ENCODE chr16:50655461-50655558
64251 chr1 109772147 109772147 1 + G T THYM 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGATAG < 41bp 1 0.604103423698463 1 0.28643411397934 experiment 0.791793152603073 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772147 stopgain 0.988 1 39 hm5C_associated_SNPs_39009 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr8 21859710 21859710 1 + G T THYM 21859721 + 21859701 21859741 41 CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGC CCAAGAAGATGACCACACCCCTGAACCAGGAGAGCGACCGC < 41bp 1 0.705390738341055 1 0.742459654808044 experiment 0.58921852331789 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859721 chr8:21859710 nonsynonymous SNV 0.997 1 10 hm5C_associated_SNPs_39010 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr8:21859703-21859723
64251 chr10 75551827 75551827 1 + G T THYM 75551836 + 75551816 75551856 41 TGCTGGGCCCGGGCCCTGCCCTCTCGGCCAGGTGCCTCCCG TGCTGGGCCCGTGCCCTGCCCTCTCGGCCAGGTGCCTCCCG < 41bp 1 0.323868016354223 1 0.153413683176041 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551836 chr10:75551827 synonymous SNV . 0 12 hm5C_associated_SNPs_39011 0 0 5 DDX42 POSTAR2 ENCODE chr10:75551810-75551872
64251 chr17 61907730 61907730 1 + G T THYM 61907746 + 61907726 61907766 41 GGTGGAGAAAGTACCAGATTCAACTTATGAGATGATTGGTG GGTGTAGAAAGTACCAGATTCAACTTATGAGATGATTGGTG < 41bp 1 0.379410704718763 1 0.464023500680923 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907746 chr17:61907730 stopgain 0.999 1 5 hm5C_associated_SNPs_39012 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61907641-61907850
64251 chr17 61907730 61907730 1 + G T THYM 61907749 + 61907729 61907769 41 GGAGAAAGTACCAGATTCAACTTATGAGATGATTGGTGGAC GTAGAAAGTACCAGATTCAACTTATGAGATGATTGGTGGAC < 41bp 1 0.267899045315552 1 0.10838919878006 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907749 chr17:61907730 stopgain 0.999 1 2 hm5C_associated_SNPs_39013 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61907641-61907850
64251 chr6 26124558 26124558 1 + G T THYM 26124556 + 26124536 26124576 41 TTCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAA TTCCCGGTGGGCCGAGTGCACCTCCTGCTCCGTAAAGGCAA < 41bp 1 0.250936838342247 1 0.0767993628978729 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124556 chr6:26124558 nonsynonymous SNV 0.956 4 23 hm5C_associated_SNPs_39014 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26124400-26124560
64251 chr21 30699613 30699613 1 + G C THYM 30699616 + 30699596 30699636 41 TTTCAGAACCCCAGCAAGAACCTTGCCCATATGCTTGTGTC TTTCAGAACCCCAGCAACAACCTTGCCCATATGCTTGTGTC < 41bp 1 0.0804097154434393 1 0.116257935762405 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699616 chr21:30699613 nonsynonymous SNV 0.989 2 18 hm5C_associated_SNPs_39018 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:30699572-30699622
64251 chr21 30699613 30699613 1 + G C THYM 30699617 + 30699597 30699637 41 TTCAGAACCCCAGCAAGAACCTTGCCCATATGCTTGTGTCA TTCAGAACCCCAGCAACAACCTTGCCCATATGCTTGTGTCA < 41bp 1 0.190607500149032 1 0.24155005812645 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699617 chr21:30699613 nonsynonymous SNV 0.989 2 17 hm5C_associated_SNPs_39019 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:30699572-30699622
64251 chrX 153780352 153780352 1 + G T THYM 153780337 + 153780317 153780357 41 GGGAAGCCAGCCATGCTGCACCTGCCTTCAGAACAGGGCGC GGGAAGCCAGCCATGCTGCACCTGCCTTCAGAACATGGCGC < 41bp 1 0.0746711008133 1 0.11449721455574 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IKBKG ENSG00000073009 CDS Human other chrX:153780337 chrX:153780352 nonsynonymous SNV 0.095 1 36 hm5C_associated_SNPs_39020 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:153780340-153780360
64251 chr22 18028350 18028350 1 + G T THYM 18028370 + 18028350 18028390 41 GAGTACCCGAATTCAGCTGCCCATTACCACATCAGTCCAGG TAGTACCCGAATTCAGCTGCCCATTACCACATCAGTCCAGG < 41bp 1 0.0295904938283655 1 0.0325473248958588 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CECR2 ENSG00000099954 CDS Human protein_coding chr22:18028370 chr22:18028350 stopgain 0.212 1 1 hm5C_associated_SNPs_39021 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:18028340-18028371
64251 chr3 40503432 40503432 1 + G T THYM 40503435 + 40503415 40503455 41 ATTGATAATTTTCAGAGGAACAGAATAATCAAGAATGAAGT ATTGATAATTTTCAGAGTAACAGAATAATCAAGAATGAAGT < 41bp 1 0.667082228354605 1 0.236316561698914 experiment 0.665835543290791 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40503435 chr3:40503432 stopgain 0.997 4 18 hm5C_associated_SNPs_39022 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:40503424-40503456
64251 chrX 123195681 123195681 1 + C T UCEC 123195669 + 123195649 123195689 41 GATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAAT GATTGAAATAATGCTTTGTACCATTAGACAAGTGGCTGAAT < 41bp 1 0.0780004816706977 1 0.0404730141162872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195669 chrX:123195681 nonsynonymous SNV 0.995 2 33 hm5C_associated_SNPs_39023 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:123195625-123195719
64251 chrX 123195681 123195681 1 + C T UCEC 123195670 + 123195650 123195690 41 ATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAATG ATTGAAATAATGCTTTGTACCATTAGACAAGTGGCTGAATG < 41bp 1 0.395240801795965 1 0.0757402777671814 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195670 chrX:123195681 nonsynonymous SNV 0.995 2 32 hm5C_associated_SNPs_39024 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:123195625-123195719
64251 chr20 47605106 47605106 1 + T A UCEC 47605120 + 47605100 47605140 41 GAAGAGTATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA GAAGAGAATCTCTCAAGCATCTATGAAGAGATAGAAGGCAA < 41bp 1 0.27823906198657 1 0.172719895839691 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47605120 chr20:47605106 nonsynonymous SNV 0.967 4 7 hm5C_associated_SNPs_39025 0 0 1 BUD13 POSTAR2 ENCODE chr20:47605096-47605119
64251 chr20 60708477 60708477 1 + G A UCEC 60708483 + 60708463 60708503 41 TGGGACCACCCGTCGCAACCCCACTTCCCACAGGGCCGGGA TGGGACCACCCGTCACAACCCCACTTCCCACAGGGCCGGGA < 41bp 1 0.300833040752452 1 0.045563817024231 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60708483 chr20:60708477 nonsynonymous SNV 0.971 2 15 hm5C_associated_SNPs_39026 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:60708438-60708494
64251 chr20 49458396 49458396 1 + C T UCEC 49458380 + 49458360 49458400 41 GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGCGGAG GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGTGGAG < 41bp 1 0.263471791682881 1 0.0562769174575806 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49458380 chr20:49458396 nonsynonymous SNV 0.097 1 37 hm5C_associated_SNPs_39027 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49458378-49458400
64251 chr17 80193906 80193906 1 + G A UCEC 80193913 + 80193893 80193933 41 GGCCGTGGTGGACGAGGGCCCCACAGGCGTCAAGGCCCCTG GGCCGTGGTGGACAAGGGCCCCACAGGCGTCAAGGCCCCTG < 41bp 1 0.570850056321234 1 0.0384563207626343 experiment 0.858299887357532 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC16A3 ENSG00000141526 CDS Human protein_coding chr17:80193913 chr17:80193906 nonsynonymous SNV 0.730 0 14 hm5C_associated_SNPs_39030 0 0 6 DDX3X POSTAR2 ENCODE chr17:80193875-80193962
64251 chr16 30750647 30750647 1 + T C UCEC 30750662 + 30750642 30750682 41 TGGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACA TGGACCTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACA < 41bp 1 0.185764362699181 1 0.162755757570267 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750662 chr16:30750647 synonymous SNV . 0 6 hm5C_associated_SNPs_39031 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr16 30750647 30750647 1 + T C UCEC 30750663 + 30750643 30750683 41 GGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACAC GGACCTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACAC < 41bp 1 0.388531738735857 1 0.429180413484573 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750663 chr16:30750647 synonymous SNV . 0 5 hm5C_associated_SNPs_39032 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr1 39751388 39751388 1 + T C UCEC 39751378 + 39751358 39751398 41 TCAGGCAGCTGCAGGTGGATCTCCAGATCCTGCGGGATGAG TCAGGCAGCTGCAGGTGGATCTCCAGATCCCGCGGGATGAG < 41bp 1 0.520908077245051 1 0.807735025882721 experiment 0.958183845509899 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39751378 chr1:39751388 nonsynonymous SNV 0.996 4 31 hm5C_associated_SNPs_39039 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr1:39751365-39751398
64251 chr6 33423707 33423707 1 + C T UCEC 33423723 + 33423703 33423743 41 CCTGCACTGCCCCCCAAAATCTTCTACATTAAGCAGGAACC CCTGTACTGCCCCCCAAAATCTTCTACATTAAGCAGGAACC < 41bp 1 0.191839684434437 1 0.476873934268951 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33423723 chr6:33423707 nonsynonymous SNV 0.456 0 5 hm5C_associated_SNPs_39042 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33423690-33423734
64251 chr5 68692327 68692327 1 + G T UCEC 68692324 + 68692304 68692344 41 TCATTGCCAAGGAGGAGGATCAAGTTTTCGACCCTTGCACA TCATTGCCAAGGAGGAGGATCAATTTTTCGACCCTTGCACA < 41bp 1 0.296600104017087 1 0.245425462722778 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD17 ENSG00000152942 CDS Human protein_coding chr5:68692324 chr5:68692327 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_39043 0 0 1 PPIG POSTAR2 ENCODE chr5:68692314-68692366
64251 chr17 41561546 41561546 1 + G A UCEC 41561537 + 41561517 41561557 41 CTGGACAATCACTTGGGGATCAACGACAAGGACCTTGGTGA CTGGACAATCACTTGGGGATCAACGACAAAGACCTTGGTGA < 41bp 1 0.526918174498093 1 0.327905118465424 experiment 0.946163651003814 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41561537 chr17:41561546 synonymous SNV . 0 30 hm5C_associated_SNPs_39044 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:41561482-41561549
64251 chr17 47115724 47115724 1 + G A UCEC 47115716 + 47115696 47115736 41 AAGCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCC AAGCAGCAGCAAGTGGACATCCCCCTTCAGCTCCTGGTGCC < 41bp 1 0.237566673446031 1 0.09939244389534 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115716 chr17:47115724 nonsynonymous SNV 0.966 4 29 hm5C_associated_SNPs_39045 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr17 47115724 47115724 1 + G A UCEC 47115718 + 47115698 47115738 41 GCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCCCA GCAGCAGCAAGTGGACATCCCCCTTCAGCTCCTGGTGCCCA < 41bp 1 0.0698082660997166 1 0.0571526288986206 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115718 chr17:47115724 nonsynonymous SNV 0.966 4 27 hm5C_associated_SNPs_39046 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr19 56172440 56172440 1 + C A UCEC 56172435 + 56172415 56172455 41 ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG ATTCCAGCCACTGCTCTTCTCCCCAACATGACCCCTGACGG < 41bp 1 0.648013928445645 1 0.783722519874573 experiment 0.703972143108709 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172435 chr19:56172440 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_39047 0 0 26 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr19 56172440 56172440 1 + C A UCEC 56172437 + 56172417 56172457 41 TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC TCCAGCCACTGCTCTTCTCCCCAACATGACCCCTGACGGTC < 41bp 1 0.137099578609685 1 0.317163020372391 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172437 chr19:56172440 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_39048 0 0 26 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr19 56172440 56172440 1 + C A UCEC 56172438 + 56172418 56172458 41 CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT CCAGCCACTGCTCTTCTCCCCAACATGACCCCTGACGGTCT < 41bp 1 0.631386766277584 1 0.551837623119354 experiment 0.737226467444831 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172438 chr19:56172440 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_39049 0 0 26 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56172421-56172444
64251 chr5 74069881 74069881 1 + T G UCEC 74069862 + 74069842 74069882 41 GAGCGAATTGGGCCTTGTGACACAAGGAGGCAAAGTTATTT GAGCGAATTGGGCCTTGTGACACAAGGAGGCAAAGTTATGT < 41bp 1 0.765751521645138 1 0.287834048271179 experiment 0.468496956709723 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NSA2 ENSG00000164346 CDS Human protein_coding chr5:74069862 chr5:74069881 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_39050 0 0 4 AGGF1 POSTAR2 ENCODE chr5:74069682-74069886
64251 chr18 12718612 12718612 1 + C T UCEC 12718592 + 12718572 12718612 41 TGCCAGAGTCATTGTTCTTTCAAGCAGTCATTCATATCAGC TGCCAGAGTCATTGTTCTTTCAAGCAGTCATTCATATCAGT < 41bp 1 0.709988589368315 1 0.685473680496216 experiment 0.58002282126337 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718592 chr18:12718612 nonsynonymous SNV 0.825 1 41 hm5C_associated_SNPs_39051 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr18:12718598-12718623
64251 chr18 12718612 12718612 1 + C T UCEC 12718624 + 12718604 12718644 41 CATATCAGCGTAATGATCTGCAGCTTCGTAGGTATGTTTCT CATATCAGTGTAATGATCTGCAGCTTCGTAGGTATGTTTCT < 41bp 1 0.417567882384709 1 0.406907618045807 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12718624 chr18:12718612 nonsynonymous SNV 0.825 1 9 hm5C_associated_SNPs_39052 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr18:12718598-12718623
64251 chr15 41571579 41571579 1 + C A UCEC 41571595 + 41571575 41571615 41 ATTTCTTCACTAAAGGAGACCAAACTGTTCCTTGCGGTCTA ATTTATTCACTAAAGGAGACCAAACTGTTCCTTGCGGTCTA < 41bp 1 0.217428576150193 1 0.172593802213669 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41571595 chr15:41571579 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_39053 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:41571560-41571583
64251 chr3 49060159 49060159 1 + G A UCEC 49060174 + 49060154 49060194 41 TCACCGAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC TCACCAAAGACAGCTTTTCCCTCTTCTGGTTGCTGGAGCCC < 41bp 1 0.375489224237678 1 0.242324560880661 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060174 chr3:49060159 nonsynonymous SNV 0.954 3 6 hm5C_associated_SNPs_39054 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:49060140-49060160
64251 chr3 155629025 155629025 1 + G T UCEC 155629040 + 155629020 155629060 41 AGCCAGTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA AGCCATTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA < 41bp 1 0.106659960626835 1 0.0762109756469727 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155629040 chr3:155629025 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_39055 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155629005-155629070
64251 chrX 129149434 129149434 1 + G A UCEC 129149429 + 129149409 129149449 41 GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACC GCAACCACGGCCTGGGGGCTCCTTCATTCCAGAGCAGGACC < 41bp 1 0.0199209989774688 1 0.142282873392105 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149429 chrX:129149434 nonsynonymous SNV 0.983 0 26 hm5C_associated_SNPs_39056 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129149409-129149434
64251 chr20 55968380 55968380 1 + G A UCEC 55968361 + 55968341 55968381 41 CCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGG CCATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCAG < 41bp 1 0.108723116093505 1 0.115832328796387 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968361 chr20:55968380 nonsynonymous SNV 0.989 1 40 hm5C_associated_SNPs_39057 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968380 55968380 1 + G A UCEC 55968363 + 55968343 55968383 41 ATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGAC ATTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCAGAC < 41bp 1 0.358251727900672 1 0.220673620700836 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968363 chr20:55968380 nonsynonymous SNV 0.989 1 38 hm5C_associated_SNPs_39058 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968380 55968380 1 + G A UCEC 55968364 + 55968344 55968384 41 TTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACT TTGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCAGACT < 41bp 1 0.0169828120419903 1 0.107390582561493 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968364 chr20:55968380 nonsynonymous SNV 0.989 1 37 hm5C_associated_SNPs_39059 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968380 55968380 1 + G A UCEC 55968365 + 55968345 55968385 41 TGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTT TGGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCAGACTT < 41bp 1 0.0665273863464793 1 0.109325706958771 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968365 chr20:55968380 nonsynonymous SNV 0.989 1 36 hm5C_associated_SNPs_39060 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr20 55968380 55968380 1 + G A UCEC 55968366 + 55968346 55968386 41 GGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCGGACTTA GGGGTGCAGCAGCTGCACCCCACCTTGATCCAGCAGACTTA < 41bp 1 0.212966875565953 1 0.303290575742722 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55968366 chr20:55968380 nonsynonymous SNV 0.989 1 35 hm5C_associated_SNPs_39061 0 0 6 BUD13 POSTAR2 ENCODE chr20:55968312-55968407
64251 chr19 45375187 45375187 1 + A G UCEC 45375183 + 45375163 45375203 41 ACGACAGTGGCCCTCTGCATCTCCAAAGAGGGCCGCCCACC ACGACAGTGGCCCTCTGCATCTCCGAAGAGGGCCGCCCACC < 41bp 1 0.756679190982364 1 0.859354674816132 experiment 0.486641618035271 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NECTIN2 ENSG00000130202 CDS Human protein_coding chr19:45375183 chr19:45375187 nonsynonymous SNV 0.422 0 25 hm5C_associated_SNPs_39062 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45375165-45375190
64251 chr1 44684021 44684021 1 + G A UCEC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGGAGCAGGAGTACCAACTTTATCTCCACGATGAT < 41bp 1 0.430471706192886 1 0.357819378376007 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684021 synonymous SNV . 0 23 hm5C_associated_SNPs_39063 0 0 1 ZNF622 POSTAR2 ENCODE chr1:44683976-44684024
64251 chr17 59485820 59485820 1 + C T UCEC 59485837 + 59485817 59485857 41 GGGCTGGAGAGCCAGCGAGCCCTCTCCCCAGGCCGGGAGTC GGGTTGGAGAGCCAGCGAGCCCTCTCCCCAGGCCGGGAGTC < 41bp 1 0.0904132906084479 1 0.0373586118221283 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBX2 ENSG00000121068 CDS Human protein_coding chr17:59485837 chr17:59485820 synonymous SNV . 0 4 hm5C_associated_SNPs_39064 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:59485806-59485831
64251 chr1 33138423 33138423 1 + C A UCEC 33138407 + 33138387 33138427 41 TTCAGTTTATTCATGGTGGTCATACTGCCAAGATATCTGAT TTCAGTTTATTCATGGTGGTCATACTGCCAAGATATATGAT < 41bp 1 0.0533903259663875 1 0.0851960778236389 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RBBP4 ENSG00000162521 CDS Human protein_coding chr1:33138407 chr1:33138423 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_39065 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:33138394-33138428
64251 chr10 124813267 124813267 1 + G A UCEC 124813278 + 124813258 124813298 41 AAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGGA AAGCATATCAATGCAGAATACTGACGTCTATAGGAGTGGGA < 41bp 1 0.327533829746029 1 0.113382041454315 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ACADSB ENSG00000196177 CDS Human protein_coding chr10:124813278 chr10:124813267 nonsynonymous SNV 0.007 1 10 hm5C_associated_SNPs_39066 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:124813267-124813297
64251 chr6 80741218 80741218 1 + C T UCEC 80741213 + 80741193 80741233 41 TCTTCTTCAGCAAATGAATGCATTTCGGTTAAAGGAAGAAT TCTTCTTCAGCAAATGAATGCATTTTGGTTAAAGGAAGAAT < 41bp 1 0.0360373123104157 1 0.11958509683609 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTK ENSG00000112742 CDS Human protein_coding chr6:80741213 chr6:80741218 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_39068 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr6:80741199-80741222
64251 chr10 5790715 5790715 1 + A C UCEC 5790732 + 5790712 5790752 41 TTCAGAATCCTTTGATACTTCTGTTTGTGGAATAGCCACAG TTCCGAATCCTTTGATACTTCTGTTTGTGGAATAGCCACAG < 41bp 1 0.360229436760907 1 0.0963650047779083 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5790732 chr10:5790715 synonymous SNV . 0 4 hm5C_associated_SNPs_39071 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:5790666-5790716
64251 chr1 24019205 24019205 1 + A C UCEC 24019185 + 24019165 24019205 41 TGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAA TGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAC < 41bp 1 0.790876896945765 1 0.175962716341019 experiment 0.418246206108471 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24019185 chr1:24019205 nonsynonymous SNV 0.995 3 41 hm5C_associated_SNPs_39073 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:24019100-24019220
64251 chr5 128440932 128440932 1 + A C UCEC 128440946 + 128440926 128440966 41 TACCCTAAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT TACCCTCAAGGTCTTGGGAGCACGGTTCAAGAAATTGATTT < 41bp 1 0.579619499361022 1 0.382976889610291 experiment 0.840761001277956 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128440946 chr5:128440932 nonsynonymous SNV 0.993 1 7 hm5C_associated_SNPs_39076 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:128440907-128440945
64251 chr11 66571476 66571476 1 + T G UCEC 66571496 + 66571476 66571516 41 TTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGT GTTGGTACAATTGAATCACACTGCAGCAGAATTCACCCTGT < 41bp 1 0.750234251621181 1 0.76618754863739 experiment 0.499531496757639 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66571496 chr11:66571476 nonsynonymous SNV 0.549 0 1 hm5C_associated_SNPs_39077 0 0 1 U2AF2 POSTAR2 GSE61603,GSM1509288 chr11:66571460-66571480
64251 chrX 152959702 152959702 1 + G A UCEC 152959707 + 152959687 152959727 41 CTCTGCTTTGTCATCGATCTCTCCATGGTGACTGATGTGAG CTCTGCTTTGTCATCAATCTCTCCATGGTGACTGATGTGAG < 41bp 1 0.767474832017441 1 0.950749456882477 experiment 0.465050335965119 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959707 chrX:152959702 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_39078 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chrX 152959702 152959702 1 + G A UCEC 152959718 + 152959698 152959738 41 CATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG CATCAATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG < 41bp 1 0.309439072020366 1 0.0752876996994019 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959718 chrX:152959702 nonsynonymous SNV 0.998 1 5 hm5C_associated_SNPs_39079 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chr9 100774709 100774709 1 + G A UCEC 100774718 + 100774698 100774738 41 TTTAGGAAGAAGAATTTGGACTTGATGAAGAAGATGAAGAT TTTAGGAAGAAAAATTTGGACTTGATGAAGAAGATGAAGAT < 41bp 1 0.474813705419227 1 0.220177352428436 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100774718 chr9:100774709 nonsynonymous SNV 0.995 1 12 hm5C_associated_SNPs_39080 0 0 61 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:100774700-100774720
64251 chr6 28333362 28333362 1 + A G UCEC 28333342 + 28333322 28333362 41 GAAGCTGGTGAACAGGAGGGCAGGCTACAAAGAAAGCAGAA GAAGCTGGTGAACAGGAGGGCAGGCTACAAAGAAAGCAGAG < 41bp 1 0.529513392830244 1 0.453444302082062 experiment 0.940973214339511 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333342 chr6:28333362 nonsynonymous SNV 0.693 0 41 hm5C_associated_SNPs_39082 0 0 1 PPIG POSTAR2 ENCODE chr6:28333211-28333384
64251 chr12 6961425 6961425 1 + G A UCEC 6961445 + 6961425 6961465 41 GACGAGTGCGCCTTCTCCTTCGACACGCCGGTAAGCCCATT AACGAGTGCGCCTTCTCCTTCGACACGCCGGTAAGCCCATT < 41bp 1 0.651582250661102 1 0.747104048728943 experiment 0.696835498677796 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6961445 chr12:6961425 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_39083 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:6961420-6961440
64251 chr16 67914038 67914038 1 + C T UCEC 67914050 + 67914030 67914070 41 AGTGGCAGCCTTCAGGCAAGCCCGCGTGGCCTCCTGCCTGG AGTGGCAGTCTTCAGGCAAGCCCGCGTGGCCTCCTGCCTGG < 41bp 1 0.652719267474742 1 0.254747152328491 experiment 0.694561465050516 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914050 chr16:67914038 synonymous SNV . 0 9 hm5C_associated_SNPs_39085 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:67914038-67914039
64251 chr11 118247394 118247394 1 + A G UCEC 118247379 + 118247359 118247399 41 AACAGAGAACCTTGCTCTGACAGAGTACACCTTGTACTTGG AACAGAGAACCTTGCTCTGACAGAGTACACCTTGTGCTTGG < 41bp 1 0.707173241165139 1 0.482723295688629 experiment 0.585653517669722 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118247379 chr11:118247394 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_39086 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:118247369-118247404
64251 chr9 4697161 4697161 1 + G T UCEC 4697148 + 4697128 4697168 41 TTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGC TTTTTGTCTGACCATCCATACCTTGTATGTGAATAAACTGC < 41bp 1 0.051169291709529 1 0.0489274859428406 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4697148 chr9:4697161 stopgain 1.000 1 34 hm5C_associated_SNPs_39087 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:4697143-4697182
64251 chr22 39918074 39918074 1 + G T UCEC 39918059 + 39918039 39918079 41 TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCAGATCAT TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCATATCAT < 41bp 1 0.168197469113518 1 0.0504863262176514 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918059 chr22:39918074 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_39088 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:39917998-39918083
64251 chrX 123229247 123229247 1 + G T UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGACGAGAGATAACAGAACTGAAGCCTGATTTCT < 41bp 1 0.586192527567118 1 0.596678912639618 experiment 0.827614944865764 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229247 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_39090 0 0 12 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chr16 50261756 50261756 1 + G A UCEC 50261765 + 50261745 50261785 41 GTTAGGATTCCGATGCAACACCATGCAAAACCCCGAAACAG GTTAGGATTCCAATGCAACACCATGCAAAACCCCGAAACAG < 41bp 1 0.194655960407818 1 0.622231781482697 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPD5 ENSG00000121274 CDS Human protein_coding chr16:50261765 chr16:50261756 nonsynonymous SNV 0.996 4 12 hm5C_associated_SNPs_39091 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:50261740-50261760
64251 chr6 44219852 44219852 1 + G A UCEC 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGAA < 41bp 1 0.543008764433057 1 0.0371690988540649 experiment 0.913982471133886 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219852 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_39094 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219852 44219852 1 + G A UCEC 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACGAGTACTGTGTGCAGCAGCTCAAGAAATTTGAT < 41bp 1 0.638993957143128 1 0.286639332771301 experiment 0.722012085713744 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219852 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_39095 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219852 44219852 1 + G A UCEC 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACGAGTACTGTGTGCAGCAGCTCAAGAAATTTGATGGGAAG < 41bp 1 0.746750646302771 1 0.632581651210785 experiment 0.506498707394458 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219852 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_39096 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219852 44219852 1 + G A UCEC 44219869 + 44219849 44219889 41 AAGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGA AAGAAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGA < 41bp 1 0.284918666537094 1 0.275392949581146 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219869 chr6:44219852 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_39097 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219852 44219852 1 + G A UCEC 44219870 + 44219850 44219890 41 AGGAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG AGAAATTTGATGGGAAGAGCCTGGTCTCAGTTACCAAGGAG < 41bp 1 0.759144576546673 1 0.20789110660553 experiment 0.481710846906653 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219870 chr6:44219852 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_39098 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr11 61915976 61915976 1 + C T UCEC 61915982 + 61915962 61916002 41 GGGAGAAGGCCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGG GGGAGAAGGCCCTGTGGCTGCAGAAGGAGCAGCTGCAGAGG < 41bp 1 0.725529732446555 1 0.508686363697052 experiment 0.54894053510689 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915982 chr11:61915976 nonsynonymous SNV 0.926 2 15 hm5C_associated_SNPs_39100 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr11 61915976 61915976 1 + C T UCEC 61915991 + 61915971 61916011 41 CCCTGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAG CCCTGTGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAG < 41bp 1 0.260120184871634 1 0.277056813240051 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915991 chr11:61915976 nonsynonymous SNV 0.926 2 6 hm5C_associated_SNPs_39101 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chr11 61915976 61915976 1 + C T UCEC 61915994 + 61915974 61916014 41 TGCGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG TGTGGCTGCAGAAGGAGCAGCTGCAGAGGGAACTGGAGGAG < 41bp 1 0.652723448515205 1 0.783992767333984 experiment 0.69455310296959 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61915994 chr11:61915976 nonsynonymous SNV 0.926 2 3 hm5C_associated_SNPs_39102 0 0 8 BUD13 POSTAR2 ENCODE chr11:61915948-61915982
64251 chrX 73045211 73045211 1 - C A UCEC 73045203 - 73045183 73045223 41 TGTGGATACAAAGAAAGGAGCAAGCATAAAAAAGTGCTCTT TGTGGATACAAATAAAGGAGCAAGCATAAAAAAGTGCTCTT < 41bp 1 0.144730850979842 1 0.543775260448456 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045203 chrX:73045211 . . 0 13 hm5C_associated_SNPs_39103 0 0 68 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73045211 73045211 1 - C A UCEC 73045215 - 73045195 73045235 41 TGTGATAAGCGTTGTGGATACAAAGAAAGGAGCAAGCATAA TGTGATAAGCGTTGTGGATACAAATAAAGGAGCAAGCATAA < 41bp 1 0.166715481647827 1 0.393381983041763 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045215 chrX:73045211 . . 0 25 hm5C_associated_SNPs_39104 0 0 68 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr9 137987802 137987802 1 + A G UCEC 137987790 + 137987770 137987810 41 TACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTC TACGTGGAGAAGATGGAGAACCAAATGAAAGGGCTGGAGTC < 41bp 1 0.27477309657909 1 0.277300417423248 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137987790 chr9:137987802 synonymous SNV . 0 33 hm5C_associated_SNPs_39105 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:137987791-137987829
64251 chr9 137987802 137987802 1 + A G UCEC 137987791 + 137987771 137987811 41 ACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCC ACGTGGAGAAGATGGAGAACCAAATGAAAGGGCTGGAGTCC < 41bp 1 0.397897610837029 1 0.680876791477203 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137987791 chr9:137987802 synonymous SNV . 0 32 hm5C_associated_SNPs_39106 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:137987791-137987829
64251 chr17 78704404 78704404 1 + G A UCEC 78704396 + 78704376 78704416 41 TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGC TCCCTCTGTCCATATATGACCTGCAGACATGGATGGGCAGC < 41bp 1 0.431056795949966 1 0.0769566595554352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPTOR ENSG00000141564 CDS Human protein_coding chr17:78704396 chr17:78704404 synonymous SNV . 0 29 hm5C_associated_SNPs_39107 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:78704390-78704404
64251 chr3 37407581 37407581 1 + G A UCEC 37407590 + 37407570 37407610 41 GTCATGGCTCCGATCTTCATCTTGAAGAAGAGTGACATTGG GTCATGGCTCCAATCTTCATCTTGAAGAAGAGTGACATTGG < 41bp 1 0.609305716866305 1 0.567752242088318 experiment 0.781388566267391 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37407590 chr3:37407581 nonsynonymous SNV 0.983 3 12 hm5C_associated_SNPs_39108 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37407571-37407643
64251 chr3 184038427 184038427 1 + C T UCEC 184038413 + 184038393 184038433 41 TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGAGATC TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTTGAGATC < 41bp 1 0.144796623428439 1 0.470406532287598 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184038413 chr3:184038427 stopgain 1.000 1 35 hm5C_associated_SNPs_39110 0 0 19 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:184038416-184038432
64251 chr2 152276723 152276723 1 + A C UCEC 152276742 + 152276722 152276762 41 AATTCAAATGGGAGAAGAGGCAGTGAGGTGGGCAAAACTGG ACTTCAAATGGGAGAAGAGGCAGTGAGGTGGGCAAAACTGG < 41bp 1 0.34530248300135 1 0.194058030843735 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152276742 chr2:152276723 nonsynonymous SNV 0.944 0 2 hm5C_associated_SNPs_39111 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:152276720-152276740
64251 chr14 96997912 96997912 1 + G T UCEC 96997917 + 96997897 96997937 41 ATATAAGATGTATAAGAAGTCTTAACGGTATGAGAAAGCCT ATATAAGATGTATAATAAGTCTTAACGGTATGAGAAAGCCT < 41bp 1 0.241120318750875 1 0.117374002933502 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96997917 chr14:96997912 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_39112 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr14:96997768-96997937
64251 chr20 17956512 17956512 1 + T G UCEC 17956504 + 17956484 17956524 41 AAGTGCTGTTCAACATGAAACCTTAAACTATATAGGTCTGC AAGTGCTGTTCAACATGAAACCTTAAACGATATAGGTCTGC < 41bp 1 0.112431116511372 1 0.14197501540184 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956504 chr20:17956512 nonsynonymous SNV 0.351 4 29 hm5C_associated_SNPs_39113 0 0 14 EWSR1 POSTAR2 SRX029344 chr20:17956486-17956518
64251 chr5 149756155 149756155 1 + G A UCEC 149756135 + 149756115 149756155 41 AAGCAGGAAGACTCTGAGAGCAGTGAGGAGGAATCAGACAG AAGCAGGAAGACTCTGAGAGCAGTGAGGAGGAATCAGACAA < 41bp 1 0.295137142992224 1 0.239847272634506 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149756135 chr5:149756155 nonsynonymous SNV 0.093 0 41 hm5C_associated_SNPs_39114 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149756116-149756186
64251 chr5 149756155 149756155 1 + G A UCEC 149756153 + 149756133 149756173 41 AGCAGTGAGGAGGAATCAGACAGTGAGGAAGCAGCTGCATC AGCAGTGAGGAGGAATCAGACAATGAGGAAGCAGCTGCATC < 41bp 1 0.287611239230804 1 0.48436039686203 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149756153 chr5:149756155 nonsynonymous SNV 0.093 0 23 hm5C_associated_SNPs_39115 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149756116-149756186
64251 chr19 4359979 4359979 1 + G A UCEC 4359996 + 4359976 4360016 41 GGCGTCCTCAAGCAGGGGAGCTGAGCCTTCCAGGGCAGGGT GGCATCCTCAAGCAGGGGAGCTGAGCCTTCCAGGGCAGGGT < 41bp 1 0.305003822228229 1 0.370726525783539 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MPND ENSG00000008382 CDS Human protein_coding chr19:4359996 chr19:4359979 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_39116 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:4359979-4359980
64251 chr16 675955 675955 1 + G A UCEC 675974 + 675954 675994 41 AGCGGCAGGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAG AACGGCAGGTCCCGACGGAGCAGGCCCGCGCGTACGCAGAG < 41bp 1 0.532934166769487 1 0.711106538772583 experiment 0.934131666461026 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C;RAB40C ENSG00000197562;ENSG00000197562 exonic;splicing Human other chr16:675974 chr16:675955 synonymous SNV . 0 2 hm5C_associated_SNPs_39118 0 0 1 RBM15 POSTAR2 ENCODE chr16:675892-675962
64251 chr8 145535491 145535491 1 + A G UCEC 145535495 + 145535475 145535515 41 GGCTCCTGCCAGCCCCATGGCCTCCCCCGGCGGGAGCATAG GGCTCCTGCCAGCCCCGTGGCCTCCCCCGGCGGGAGCATAG < 41bp 1 0.0293277770083631 1 0.0672605931758881 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535495 chr8:145535491 nonsynonymous SNV 0.026 0 17 hm5C_associated_SNPs_39119 0 0 5 IGF2BP2 POSTAR2 ENCODE chr8:145535466-145535520
64251 chr17 65739901 65739901 1 + C T UCEC 65739907 + 65739887 65739927 41 TTGAAGTAAGTTTTCGGGAGCTACAGAAATTAAATCAAGAA TTGAAGTAAGTTTTTGGGAGCTACAGAAATTAAATCAAGAA < 41bp 1 0.431470735580453 1 0.422717303037643 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65739907 chr17:65739901 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_39120 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65739800-65740198
64251 chr2 32958954 32958954 1 + C A UCEC 32958943 + 32958923 32958963 41 CTACATCTGTATTGGAACGCCTGAAGATTTTCTATTGCTGT CTACATCTGTATTGGAACGCCTGAAGATTTTATATTGCTGT < 41bp 1 0.552216926022257 1 0.521162152290344 experiment 0.895566147955485 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32958943 chr2:32958954 nonsynonymous SNV 0.995 1 32 hm5C_associated_SNPs_39121 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:32958932-32958955
64251 chr1 32691802 32691802 1 + C T UCEC 32691784 + 32691764 32691804 41 GACTCCAGGAAAGCAGCTGGCCCTTCTCAAGACCAATTCGG GACTCCAGGAAAGCAGCTGGCCCTTCTCAAGACCAATTTGG < 41bp 1 0.129330547984019 1 0.0177480280399323 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3I ENSG00000084623 CDS Human protein_coding chr1:32691784 chr1:32691802 nonsynonymous SNV 0.996 4 39 hm5C_associated_SNPs_39122 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:32691760-32691840
64251 chr7 135329740 135329740 1 + G A UCEC 135329743 + 135329723 135329763 41 GAAGGTGATCAACAATCGAGCTAAACTGCTTTCCCTTTGTT GAAGGTGATCAACAATCAAGCTAAACTGCTTTCCCTTTGTT < 41bp 1 0.287496829106688 1 0.115222960710526 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135329743 chr7:135329740 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_39123 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:135329729-135329750
64251 chr3 9870695 9870695 1 + C T UCEC 9870706 + 9870686 9870726 41 GAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACA GAACTCATGTCATCGGCATCCACTGCTTCCGCCAGACAACA < 41bp 1 0.263479224983234 1 0.481052219867706 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9870706 chr3:9870695 synonymous SNV . 0 10 hm5C_associated_SNPs_39124 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9870661-9870698
64251 chr11 44193272 44193272 1 + T C UCEC 44193285 + 44193265 44193305 41 TGAAGAATGGAATGACCCTCCTGCTGTGGTAAGTGAATTCC TGAAGAACGGAATGACCCTCCTGCTGTGGTAAGTGAATTCC < 41bp 1 0.531941871448385 1 0.359388530254364 experiment 0.936116257103231 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44193285 chr11:44193272 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_39128 0 0 3 DDX24 POSTAR2 ENCODE chr11:44193220-44193276
64251 chr17 21731058 21731058 1 + C A UCEC 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATATT < 41bp 1 0.238609013868037 1 0.416224777698517 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731058 synonymous SNV . 0 39 hm5C_associated_SNPs_39129 0 0 4 UCHL5 POSTAR2 ENCODE chr17:21731056-21731094
64251 chr2 177015070 177015070 1 + C T UCEC 177015059 + 177015039 177015079 41 TGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTG TGTAACGTTGTCTATATATACCCTGTAGAACTGAATTTGTG < 41bp 1 0.333465087972075 1 0.039739727973938 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015059 chr2:177015070 . . 0 32 hm5C_associated_SNPs_39130 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015070 177015070 1 + C T UCEC 177015060 + 177015040 177015080 41 GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGT GTAACGTTGTCTATATATACCCTGTAGAACTGAATTTGTGT < 41bp 1 0.126583762559 1 0.0449258387088776 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015060 chr2:177015070 . . 0 31 hm5C_associated_SNPs_39131 0 0 57 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr1 120286511 120286511 1 + C T UCEC 120286510 + 120286490 120286530 41 GAGTTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGT GAGTTTCTTCTATTTCCAGGCTTCCTGGCAGAGGCAGGCGT < 41bp 1 0.0871436806218148 1 0.215129405260086 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286510 chr1:120286511 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_39132 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:120286500-120286520
64251 chr1 120286511 120286511 1 + C T UCEC 120286513 + 120286493 120286533 41 TTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCG TTTCTTCTATTTCCAGGCTTCCTGGCAGAGGCAGGCGTGCG < 41bp 1 0.186270568831333 1 0.107605159282684 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286513 chr1:120286511 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_39133 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:120286500-120286520
64251 chr1 120286511 120286511 1 + C T UCEC 120286514 + 120286494 120286534 41 TTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGG TTCTTCTATTTCCAGGCTTCCTGGCAGAGGCAGGCGTGCGG < 41bp 1 0.535569396018314 1 0.137242883443832 experiment 0.928861207963372 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286514 chr1:120286511 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_39134 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:120286500-120286520
64251 chr1 120286511 120286511 1 + C T UCEC 120286518 + 120286498 120286538 41 TCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGGCTGC TCTATTTCCAGGCTTCCTGGCAGAGGCAGGCGTGCGGCTGC < 41bp 1 0.694087188655133 1 0.887699007987976 experiment 0.611825622689734 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286518 chr1:120286511 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_39135 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:120286500-120286520
64251 chr8 28574253 28574253 1 + T C UCEC 28574271 + 28574251 28574291 41 CGTTTATGTTACAGAAAATGCAGACATCGCCTGCCTTTACG CGCTTATGTTACAGAAAATGCAGACATCGCCTGCCTTTACG < 41bp 1 0.180780182257543 1 0.0716910660266876 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574271 chr8:28574253 nonsynonymous SNV 0.934 1 3 hm5C_associated_SNPs_39137 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:28574252-28574253
64251 chrX 69354375 69354375 1 + G A UCEC 69354374 + 69354354 69354394 41 CTCCTTTTTGCTCTTCCAGCCGAAATGAAGATTTGGAAGAG CTCCTTTTTGCTCTTCCAGCCAAAATGAAGATTTGGAAGAG < 41bp 1 0.500958433116657 1 0.750109672546387 experiment 0.998083133766686 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69354374 chrX:69354375 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_39138 0 0 4 BUD13 POSTAR2 ENCODE chrX:69354364-69354408
64251 chr20 43545442 43545442 1 + T G UCEC 43545459 + 43545439 43545479 41 CATTTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC CATGTTGAGACCCATGAGGCCGCACAGCAGGCCATCAACAC < 41bp 1 0.240012861260771 1 0.022765576839447 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545459 chr20:43545442 nonsynonymous SNV 0.572 4 4 hm5C_associated_SNPs_39139 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:43545440-43545460
64251 chr1 154306691 154306691 1 + G A UCEC 154306671 + 154306651 154306691 41 AATAAGTTCCCTCTGAGCAACCAGAACATGCTGCTGCGGGG AATAAGTTCCCTCTGAGCAACCAGAACATGCTGCTGCGGGA < 41bp 1 0.36317265318738 1 0.337302565574646 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154306671 chr1:154306691 nonsynonymous SNV 0.987 5 41 hm5C_associated_SNPs_39142 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr1:154306672-154306703
64251 chr11 108205734 108205734 1 + A G UCEC 108205739 + 108205719 108205759 41 AAATCTGGTGACTATACAGTCATTTAAAGCAGAATTTCGCT AAATCTGGTGACTATGCAGTCATTTAAAGCAGAATTTCGCT < 41bp 1 0.0250604258965392 1 0.0852408409118652 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108205739 chr11:108205734 nonsynonymous SNV 0.947 3 16 hm5C_associated_SNPs_39143 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:108205712-108205737
64251 chrX 70779260 70779260 1 + T C UCEC 70779251 + 70779231 70779271 41 CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAAATT CTTATGCAGTCTATTCCAGGCATGCACAACCCTGATAAATT < 41bp 1 0.0759609715108386 1 0.0736028254032135 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70779251 chrX:70779260 synonymous SNV . 0 30 hm5C_associated_SNPs_39144 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:70779212-70779263
64251 chr1 150483648 150483648 1 + A G UCEC 150483635 + 150483615 150483655 41 TATTCCCGCTGCTGCCACTGCCGCAGCCACACAAACCGCCT TATTCCCGCTGCTGCCACTGCCGCAGCCACACAGACCGCCT < 41bp 1 0.649876492846265 1 0.614895939826965 experiment 0.700247014307471 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ECM1 ENSG00000143369 CDS Human protein_coding chr1:150483635 chr1:150483648 nonsynonymous SNV 0.773 0 34 hm5C_associated_SNPs_39145 0 0 1 SND1 POSTAR2 ENCODE chr1:150483580-150483648
64251 chr7 36464171 36464171 1 + A G UCEC 36464155 + 36464135 36464175 41 TAATGCTTTATTTTTCCAGGCAAGATGTATCCAATGACTTT TAATGCTTTATTTTTCCAGGCAAGATGTATCCAATGGCTTT < 41bp 1 0.402119623335353 1 0.205767095088959 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36464155 chr7:36464171 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_39146 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:36464150-36464175
64251 chr14 103805657 103805657 1 + G A UCEC 103805638 + 103805618 103805658 41 TTAATGAGAAGATTAGAGAACAGATTAAGAAATACAGGCGC TTAATGAGAAGATTAGAGAACAGATTAAGAAATACAGGCAC < 41bp 1 0.438679199029158 1 0.243257015943527 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805638 chr14:103805657 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_39147 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805506-103805667
64251 chr14 103805657 103805657 1 + G A UCEC 103805668 + 103805648 103805688 41 AATACAGGCGCCATTTCCTACGAGTAAGCAAAGTGCTCTGG AATACAGGCACCATTTCCTACGAGTAAGCAAAGTGCTCTGG < 41bp 1 0.434442540291888 1 0.449049860239029 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805668 chr14:103805657 nonsynonymous SNV 0.998 1 10 hm5C_associated_SNPs_39148 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805506-103805667
64251 chr17 46133897 46133897 1 + C T UCEC 46133913 + 46133893 46133933 41 AGGGCGCGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGA AGGGTGCGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGA < 41bp 1 0.682779616723045 1 0.449921548366547 experiment 0.634440766553909 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133913 chr17:46133897 synonymous SNV . 0 5 hm5C_associated_SNPs_39149 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr1 39908223 39908223 1 + A T UCEC 39908204 + 39908184 39908224 41 AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGAG AGAGACCAATAAGTGGAGACCCAAAAGTCATTGAAGTTGTG < 41bp 1 0.0573349000850872 1 0.274378389120102 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39908204 chr1:39908223 nonsynonymous SNV 0.984 4 40 hm5C_associated_SNPs_39150 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39908132-39908231
64251 chr19 42839481 42839481 1 + G A UCEC 42839497 + 42839477 42839517 41 CCTCGTCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT CCTCATCCTATACAACTTCTCCGCCAACACCTGGGAGTCTT < 41bp 1 0.103749574503505 1 0.354186534881592 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42839497 chr19:42839481 nonsynonymous SNV 0.958 0 5 hm5C_associated_SNPs_39152 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:42839462-42839494
64251 chr7 155534650 155534650 1 + G A UCEC 155534638 + 155534618 155534658 41 ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACGCCCTCAGC ATAGAAATGAGCAGCAGCCGCTGCTCTGCCACACCCTCAGC < 41bp 1 0.41979763041892 1 0.12722572684288 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534638 chr7:155534650 synonymous SNV . 0 33 hm5C_associated_SNPs_39154 0 0 3 GRWD1 POSTAR2 ENCODE chr7:155534641-155534731
64251 chr17 60768382 60768382 1 + G A UCEC 60768363 + 60768343 60768383 41 TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGC TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAAC < 41bp 1 0.0340502541825043 1 0.248682647943497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768363 chr17:60768382 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_39155 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768364 + 60768344 60768384 41 GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCA GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAACA < 41bp 1 0.11703079977501 1 0.548455834388733 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768364 chr17:60768382 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_39156 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768365 + 60768345 60768385 41 AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCAT AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAACAT < 41bp 1 0.244329358681904 1 0.748599886894226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768365 chr17:60768382 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_39157 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768377 + 60768357 60768397 41 TGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA TGGGGGCCCCCGGGCTTGGGCCCCAACATGCTGAGCCACAA < 41bp 1 0.335400513864774 1 0.314747601747513 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768377 chr17:60768382 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_39158 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768378 + 60768358 60768398 41 GGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC GGGGGCCCCCGGGCTTGGGCCCCAACATGCTGAGCCACAAC < 41bp 1 0.202293265215681 1 0.370629847049713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768378 chr17:60768382 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_39159 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768379 + 60768359 60768399 41 GGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA GGGGCCCCCGGGCTTGGGCCCCAACATGCTGAGCCACAACA < 41bp 1 0.032497501856234 1 0.155040889978409 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768379 chr17:60768382 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_39160 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr17 60768382 60768382 1 + G A UCEC 60768380 + 60768360 60768400 41 GGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG GGGCCCCCGGGCTTGGGCCCCAACATGCTGAGCCACAACAG < 41bp 1 0.501861067867834 1 0.383727848529816 experiment 0.996277864264332 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768380 chr17:60768382 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_39161 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:60768370-60768416
64251 chr16 31473288 31473288 1 + C T UCEC 31473271 + 31473251 31473291 41 CTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC CTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAATGGC < 41bp 1 0.645747450230737 1 0.467088848352432 experiment 0.708505099538527 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31473271 chr16:31473288 nonsynonymous SNV 0.996 3 38 hm5C_associated_SNPs_39163 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr16:31473285-31473311
64251 chrX 131202518 131202518 1 + A G UCEC 131202534 + 131202514 131202554 41 ACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG ACACGGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG < 41bp 1 0.406184714085967 1 0.0385285317897797 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK26 ENSG00000134602 CDS Human protein_coding chrX:131202534 chrX:131202518 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_39166 0 0 3 EFTUD2 POSTAR2 ENCODE chrX:131202426-131202521
64251 chr2 99182154 99182154 1 + G T UCEC 99182143 + 99182123 99182163 41 GAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGAC GAGGACATGAGCCTTGGGATCATGGACTTGATGAACGTGAC < 41bp 1 0.448209830075695 1 0.223322868347168 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99182143 chr2:99182154 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_39167 0 0 1 DDX24 POSTAR2 ENCODE chr2:99182096-99182212
64251 chrX 55029473 55029473 1 + G A UCEC 55029466 + 55029446 55029486 41 CCATGCGGACCCTGGGAGGCCTGAGCGGCTAGTCTTTAAGA CCATGCGGACCCTGGGAGGCCTGAGCGACTAGTCTTTAAGA < 41bp 1 0.521520553599356 1 0.402795791625977 experiment 0.956958892801288 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55029466 chrX:55029473 synonymous SNV . 0 28 hm5C_associated_SNPs_39168 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:55029447-55029478
64251 chr19 11145694 11145694 1 + G A UCEC 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCAGAGGTGGAGCGGCTGAC < 41bp 1 0.480335423559285 1 0.429898858070374 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145694 synonymous SNV . 0 24 hm5C_associated_SNPs_39169 1 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145694 11145694 1 + G A UCEC 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCAGAGGTGGAGCGGCTGACCTGTGAGGAGGAG < 41bp 1 0.441807766425197 1 0.493819922208786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145694 synonymous SNV . 0 11 hm5C_associated_SNPs_39170 1 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr19 11145694 11145694 1 + G A UCEC 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCAGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.206529144721142 1 0.434219300746918 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145694 synonymous SNV . 0 8 hm5C_associated_SNPs_39171 1 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr1 20977046 20977046 1 + C T UCEC 20977032 + 20977012 20977052 41 ACAAGATGGTTGGCTGGCTCCTCCAACAATCGGCCGCCACT ACAAGATGGTTGGCTGGCTCCTCCAACAATCGGCTGCCACT < 41bp 1 0.75660696590177 1 0.966705799102783 experiment 0.48678606819646 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control PINK1 ENSG00000158828 CDS Human protein_coding chr1:20977032 chr1:20977046 synonymous SNV . 0 35 hm5C_associated_SNPs_39173 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr1:20977002-20977052
64251 chr10 75529380 75529380 1 + G A UCEC 75529387 + 75529367 75529407 41 ATCCAGCATATCGGGGAGTCCTGAATAGCCCTGTGAAGGCT ATCCAGCATATCGAGGAGTCCTGAATAGCCCTGTGAAGGCT < 41bp 1 0.72176513014979 1 0.801853716373444 experiment 0.55646973970042 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529387 chr10:75529380 synonymous SNV . 0 14 hm5C_associated_SNPs_39174 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529374-75529394
64251 chr12 95681542 95681542 1 + G T UCEC 95681551 + 95681531 95681571 41 AAATTAAAGTTGATTCAGCCCCACGTTCAAGCAAGCAACAA AAATTAAAGTTTATTCAGCCCCACGTTCAAGCAAGCAACAA < 41bp 1 0.400751114119425 1 0.0312183201313019 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95681551 chr12:95681542 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_39175 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr12:95681542-95681543
64251 chr17 38318315 38318315 1 + G T UCEC 38318298 + 38318278 38318318 41 CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATG CAAAGTGGGTAAAAAGGGCCCTAAGCATTTGGATGATTATG < 41bp 1 0.190741805658307 1 0.0392417311668396 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318298 chr17:38318315 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_39178 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr17 38318315 38318315 1 + G T UCEC 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGGTAAAAAGGGCCCTAAGCATTTGGATGATTATGAAGAT < 41bp 1 0.145385358107427 1 0.093218982219696 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318315 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_39179 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr11 114273571 114273571 1 + A G UCEC 114273562 + 114273542 114273582 41 CATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGT CATTTTAGGAAGTAGTCATGCCCCACAAGGTGTCAGTTTGT < 41bp 1 0.492437055648564 1 0.0905083119869232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273562 chr11:114273571 nonsynonymous SNV 0.945 1 30 hm5C_associated_SNPs_39181 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273571 114273571 1 + A G UCEC 114273563 + 114273543 114273583 41 ATTTTAGGAAGTAGTCATGCCCCACAAGATGTCAGTTTGTC ATTTTAGGAAGTAGTCATGCCCCACAAGGTGTCAGTTTGTC < 41bp 1 0.154790871583342 1 0.152987748384476 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273563 chr11:114273571 nonsynonymous SNV 0.945 1 29 hm5C_associated_SNPs_39182 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273571 114273571 1 + A G UCEC 114273583 + 114273563 114273603 41 CCCACAAGATGTCAGTTTGTCATATCCCCAACATCATGTTG CCCACAAGGTGTCAGTTTGTCATATCCCCAACATCATGTTG < 41bp 1 0.3789341605572 1 0.164768636226654 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273583 chr11:114273571 nonsynonymous SNV 0.945 1 9 hm5C_associated_SNPs_39183 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273571 114273571 1 + A G UCEC 114273589 + 114273569 114273609 41 AGATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT AGGTGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATT < 41bp 1 0.647767165379198 1 0.0878706276416779 experiment 0.704465669241605 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273589 chr11:114273571 nonsynonymous SNV 0.945 1 3 hm5C_associated_SNPs_39184 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273571 114273571 1 + A G UCEC 114273590 + 114273570 114273610 41 GATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTC GGTGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTC < 41bp 1 0.372995230164654 1 0.245010286569595 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273590 chr11:114273571 nonsynonymous SNV 0.945 1 2 hm5C_associated_SNPs_39185 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr11 114273571 114273571 1 + A G UCEC 114273591 + 114273571 114273611 41 ATGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCA GTGTCAGTTTGTCATATCCCCAACATCATGTTGGAAATTCA < 41bp 1 0.718077545795295 1 0.384494245052338 experiment 0.563844908409409 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114273591 chr11:114273571 nonsynonymous SNV 0.945 1 1 hm5C_associated_SNPs_39186 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:114273543-114273574
64251 chr18 72347528 72347528 1 + A C UCEC 72347515 + 72347495 72347535 41 GACAGCATGAGGAATTGCTGCGGGAGGTGAATAAGTATATA GACAGCATGAGGAATTGCTGCGGGAGGTGAATACGTATATA < 41bp 1 0.578339109893266 1 0.885518312454224 experiment 0.843321780213468 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72347515 chr18:72347528 nonsynonymous SNV 0.998 3 34 hm5C_associated_SNPs_39187 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr18:72347520-72347540
64251 chr12 22208495 22208495 1 + C A UCEC 22208514 + 22208494 22208534 41 TCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATT TATCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATT < 41bp 1 0.310194331635683 1 0.107810348272324 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22208514 chr12:22208495 nonsynonymous SNV 0.996 3 2 hm5C_associated_SNPs_39188 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:22208460-22208516
64251 chr1 145663199 145663199 1 + T G UCEC 145663218 + 145663198 145663238 41 TTTAGACCCTTTCTAAGTAGCAGTCCACTGGACCAAGATAA TGTAGACCCTTTCTAAGTAGCAGTCCACTGGACCAAGATAA < 41bp 1 0.0691026780964142 1 0.122960448265076 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663218 chr1:145663199 nonsynonymous SNV . 0 2 hm5C_associated_SNPs_39191 0 0 5 U2AF2 POSTAR2 GSE61603,GSM1509288 chr1:145663181-145663201
64251 chr2 38908425 38908425 1 + C T UCEC 38908437 + 38908417 38908457 41 TCCAGGTGCTCTGGACCCCTCGGGTGCTGTCAAATGGCGTC TCCAGGTGTTCTGGACCCCTCGGGTGCTGTCAAATGGCGTC < 41bp 1 0.770638405591066 1 0.793043613433838 experiment 0.458723188817868 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908437 chr2:38908425 nonsynonymous SNV 0.997 3 9 hm5C_associated_SNPs_39192 0 0 4 BUD13 POSTAR2 ENCODE chr2:38908425-38908459
64251 chrX 41000573 41000573 1 + A C UCEC 41000586 + 41000566 41000606 41 TCAATGGAAAGATGAATGCACTGAATGAAGTTAATAAGGTG TCAATGGCAAGATGAATGCACTGAATGAAGTTAATAAGGTG < 41bp 1 0.243432237412267 1 0.135199576616287 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41000586 chrX:41000573 synonymous SNV . 0 8 hm5C_associated_SNPs_39193 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41000552-41000579
64251 chr1 44878379 44878379 1 + G A UCEC 44878373 + 44878353 44878393 41 ATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGA ATCGGGAAGCCTCATCTAGCCCAGAGAATCGGAATGACAGA < 41bp 1 0.475529390551412 1 0.101916700601578 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878373 chr1:44878379 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_39195 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr1 44878379 44878379 1 + G A UCEC 44878382 + 44878362 44878402 41 CCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGTAC CCTCATCTAGCCCAGAGAATCGGAATGACAGATGTAAGTAC < 41bp 1 0.784246739210348 1 0.767482101917267 experiment 0.431506521579304 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878382 chr1:44878379 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_39196 0 0 1 PPIG POSTAR2 ENCODE chr1:44878348-44878407
64251 chr7 87005031 87005031 1 + G A UCEC 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT CAGCATTAACTAGTGAGGAGCGAACTCAATGGGCTAAGGTT < 41bp 1 0.142723260202305 1 0.300912082195282 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005031 nonsynonymous SNV 0.981 1 28 hm5C_associated_SNPs_39197 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr2 46609717 46609717 1 + C T UCEC 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACCAGGACTACAGCCTGTTGTCAGCCCACAA < 41bp 1 0.363024474142757 1 0.225764483213425 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609717 nonsynonymous SNV 0.053 0 29 hm5C_associated_SNPs_39198 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831629 chr2:46609700-46609720
64251 chr6 7579964 7579964 1 + G T UCEC 7579952 + 7579932 7579972 41 AGATTGAAAGGTTGAGGGTTCTACTGCAGGAAGAAGGCACC AGATTGAAAGGTTGAGGGTTCTACTGCAGGAATAAGGCACC < 41bp 1 0.217265917379509 1 0.267739206552505 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579952 chr6:7579964 stopgain 0.820 0 33 hm5C_associated_SNPs_39199 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:7579931-7579985
64251 chr19 7670113 7670113 1 + G A UCEC 7670120 + 7670100 7670140 41 ATGCCCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCC ATGCCCCCACAGAACACGTGCCCCCGGAGCTGTGGGAGCCC < 41bp 1 0.0491649021621953 1 0.0291037261486053 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670120 chr19:7670113 synonymous SNV . 0 14 hm5C_associated_SNPs_39200 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:7670113-7670114
64251 chr19 7670113 7670113 1 + G A UCEC 7670124 + 7670104 7670144 41 CCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCT CCCCACAGAACACGTGCCCCCGGAGCTGTGGGAGCCCTTCT < 41bp 1 0.530312715686332 1 0.839260876178741 experiment 0.939374568627335 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670124 chr19:7670113 synonymous SNV . 0 10 hm5C_associated_SNPs_39201 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:7670113-7670114
64251 chr12 69218195 69218195 1 + T C UCEC 69218205 + 69218185 69218225 41 ACCTTGAAGGTGGGAGTGATCAAAAGGTAATCTAAGTAAAT ACCTTGAAGGCGGGAGTGATCAAAAGGTAATCTAAGTAAAT < 41bp 1 0.697895330525778 1 0.846690714359283 experiment 0.604209338948444 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MDM2 ENSG00000135679 CDS Human protein_coding chr12:69218205 chr12:69218195 synonymous SNV . 0 11 hm5C_associated_SNPs_39204 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69218171-69218205
64251 chrX 118603788 118603788 1 + A C UCEC 118603771 + 118603751 118603791 41 GATACTTCCCCACCCAGGCTCTTAACTTCGCCTTCAAAGAT GATACTTCCCCACCCAGGCTCTTAACTTCGCCTTCAACGAT < 41bp 1 0.383739399855726 1 0.085351824760437 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603771 chrX:118603788 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_39206 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:118603751-118603789
64251 chr6 116757001 116757001 1 + C A UCEC 116756988 + 116756968 116757008 41 TTAATGCAGGGCATGAACATCCTGATCAAAACTCATTTACT TTAATGCAGGGCATGAACATCCTGATCAAAACTAATTTACT < 41bp 1 0.124905835268732 1 0.147555261850357 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DSE ENSG00000111817 CDS Human protein_coding chr6:116756988 chr6:116757001 stopgain 0.986 1 34 hm5C_associated_SNPs_39207 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr6:116756982-116757020
64251 chr3 127379400 127379400 1 + G T UCEC 127379412 + 127379392 127379432 41 AGAAGGAAGAGGTAGAGAAACAAGAGGAGGAGGAAGAGGAG AGAAGGAATAGGTAGAGAAACAAGAGGAGGAGGAAGAGGAG < 41bp 1 0.760009199131206 1 0.557161867618561 experiment 0.479981601737588 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379412 chr3:127379400 stopgain 0.644 0 9 hm5C_associated_SNPs_39208 0 0 1 AGGF1 POSTAR2 ENCODE chr3:127379371-127379542
64251 chr22 41924017 41924017 1 + C T UCEC 41924003 + 41923983 41924023 41 ACAAGCTGACCATTCAGGGCCTGAAGGACTTCACCCCTGGC ACAAGCTGACCATTCAGGGCCTGAAGGACTTCACTCCTGGC < 41bp 1 0.524336666761265 1 0.469726771116257 experiment 0.95132666647747 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924003 chr22:41924017 synonymous SNV . 0 35 hm5C_associated_SNPs_39209 0 0 8 IGF2BP1 POSTAR2 ENCODE chr22:41923941-41924027
64251 chr2 46985767 46985767 1 + A G UCEC 46985774 + 46985754 46985794 41 AATGTGGACATGAACTCCAACAGATGTTTGTCTGTCAAAGA AATGTGGACATGAGCTCCAACAGATGTTTGTCTGTCAAAGA < 41bp 1 0.48929458154306 1 0.411740213632584 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46985774 chr2:46985767 nonsynonymous SNV 0.997 0 14 hm5C_associated_SNPs_39210 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:46985754-46985769
64251 chr11 47297579 47297579 1 + G A UCEC 47297563 + 47297543 47297583 41 CTATCGATTGCTGCGCTCCCCAGTACCCGTCTCTGGGCAGA CTATCGATTGCTGCGCTCCCCAGTACCCGTCTCTGGACAGA < 41bp 1 0.485393590945241 1 0.464271068572998 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47297563 chr11:47297579 synonymous SNV . 0 37 hm5C_associated_SNPs_39211 0 0 2 FMR1 POSTAR2 ENCODE chr11:47297552-47297602
64251 chr15 74000686 74000686 1 + C A UCEC 74000701 + 74000681 74000721 41 GCAGCCTATGACATTCCCCCCAGAGGCCCTGTGGGTGACCG GCAGCATATGACATTCCCCCCAGAGGCCCTGTGGGTGACCG < 41bp 1 0.454324406056372 1 0.812351942062378 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD276 ENSG00000103855 CDS Human protein_coding chr15:74000701 chr15:74000686 nonsynonymous SNV 0.778 1 6 hm5C_associated_SNPs_39213 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:74000654-74000692
64251 chr12 112940031 112940031 1 + G A UCEC 112940029 + 112940009 112940049 41 GTGGAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA GTGGAGATCAGAGCCCTCTCCCACCTTGTACTCCAACGCCA < 41bp 1 0.234074275102614 1 0.0664404928684235 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112940029 chr12:112940031 synonymous SNV . 0 23 hm5C_associated_SNPs_39214 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:112940004-112940060
64251 chr8 26223851 26223851 1 + T C UCEC 26223834 + 26223814 26223854 41 TTGTATTTTTCCCCCAGGTGCATGAATACCTCAGAAGTAAA TTGTATTTTTCCCCCAGGTGCATGAATACCTCAGAAGCAAA < 41bp 1 0.189100842074753 1 0.110095530748367 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223834 chr8:26223851 synonymous SNV . 0 38 hm5C_associated_SNPs_39215 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223842 + 26223822 26223862 41 TTCCCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTC TTCCCCCAGGTGCATGAATACCTCAGAAGCAAACTCTGTTC < 41bp 1 0.314504726648204 1 0.0363706052303314 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223842 chr8:26223851 synonymous SNV . 0 30 hm5C_associated_SNPs_39216 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223843 + 26223823 26223863 41 TCCCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTCA TCCCCCAGGTGCATGAATACCTCAGAAGCAAACTCTGTTCA < 41bp 1 0.531881208280528 1 0.155847996473312 experiment 0.936237583438944 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223843 chr8:26223851 synonymous SNV . 0 29 hm5C_associated_SNPs_39217 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223845 + 26223825 26223865 41 CCCCAGGTGCATGAATACCTCAGAAGTAAACTCTGTTCACT CCCCAGGTGCATGAATACCTCAGAAGCAAACTCTGTTCACT < 41bp 1 0.569367234309479 1 0.619218707084656 experiment 0.861265531381042 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223845 chr8:26223851 synonymous SNV . 0 27 hm5C_associated_SNPs_39218 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223855 + 26223835 26223875 41 ATGAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAAT ATGAATACCTCAGAAGCAAACTCTGTTCACTGTATGAAAAT < 41bp 1 0.28902620119481 1 0.0995935201644897 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223855 chr8:26223851 synonymous SNV . 0 17 hm5C_associated_SNPs_39219 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223857 + 26223837 26223877 41 GAATACCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGA GAATACCTCAGAAGCAAACTCTGTTCACTGTATGAAAATGA < 41bp 1 0.0939297754258888 1 0.111632943153381 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223857 chr8:26223851 synonymous SNV . 0 15 hm5C_associated_SNPs_39220 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223862 + 26223842 26223882 41 CCTCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCA CCTCAGAAGCAAACTCTGTTCACTGTATGAAAATGACTGCA < 41bp 1 0.312586889508685 1 0.164365530014038 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223862 chr8:26223851 synonymous SNV . 0 10 hm5C_associated_SNPs_39221 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223851 26223851 1 + T C UCEC 26223864 + 26223844 26223884 41 TCAGAAGTAAACTCTGTTCACTGTATGAAAATGACTGCATA TCAGAAGCAAACTCTGTTCACTGTATGAAAATGACTGCATA < 41bp 1 0.484392189768565 1 0.0862955451011658 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223864 chr8:26223851 synonymous SNV . 0 8 hm5C_associated_SNPs_39222 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr17 7592200 7592200 1 + C T UCEC 7592180 + 7592160 7592200 41 AGGAGCTACGGGAGGGGGACCCAGTTTCTCTCTCCACTCCC AGGAGCTACGGGAGGGGGACCCAGTTTCTCTCTCCACTCCT < 41bp 1 0.349195054130004 1 0.316257357597351 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592180 chr17:7592200 synonymous SNV . 0 41 hm5C_associated_SNPs_39223 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7592200-7592238
64251 chr17 37650840 37650840 1 + C T UCEC 37650826 + 37650806 37650846 41 CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGCCATTCG CTAGACAATGAGAAAGAGGGCTTCCCAATCACAGTCATTCG < 41bp 1 0.0538320353687948 1 0.0485202372074127 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK12 ENSG00000167258 CDS Human protein_coding chr17:37650826 chr17:37650840 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_39224 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr17:37650839-37650877
64251 chr19 11559899 11559899 1 + G A UCEC 11559894 + 11559874 11559914 41 CCCTGTGTCTCTCACAGCACCTGGGGCTCATGGATTGGCCC CCCTGTGTCTCTCACAGCACCTGGGACTCATGGATTGGCCC < 41bp 1 0.681947326154298 1 0.693729639053345 experiment 0.636105347691404 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559894 chr19:11559899 nonsynonymous SNV 0.989 3 26 hm5C_associated_SNPs_39225 0 0 6 GEMIN5 POSTAR2 ENCODE chr19:11559890-11559906
64251 chr12 132335768 132335768 1 + G A UCEC 132335772 + 132335752 132335792 41 TGCTGCTGCTGCTGCCGCCACTGTCACCAGGCGCCCTGTGG TGCTGCTGCTGCTGCCACCACTGTCACCAGGCGCCCTGTGG < 41bp 1 0.188515192543724 1 0.175998419523239 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132335772 chr12:132335768 synonymous SNV . 0 17 hm5C_associated_SNPs_39226 0 0 2 DDX55 POSTAR2 ENCODE chr12:132335758-132335834
64251 chr8 97316287 97316287 1 + G T UCEC 97316303 + 97316283 97316323 41 CACCGGGAAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTG CACCTGGAAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTG < 41bp 1 0.229515529435524 1 0.0524026155471802 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97316303 chr8:97316287 nonsynonymous SNV 0.959 4 5 hm5C_associated_SNPs_39227 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:97316269-97316287
64251 chr12 121001391 121001391 1 + G A UCEC 121001403 + 121001383 121001423 41 CTTCACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACC CTTCACACACCTCAGCAGCTCTCCTTGTTACTACTTTTACC < 41bp 1 0.349195728532568 1 0.191885769367218 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001403 chr12:121001391 nonsynonymous SNV 0.744 1 9 hm5C_associated_SNPs_39228 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:121001363-121001391
64251 chr12 121001391 121001391 1 + G A UCEC 121001406 + 121001386 121001426 41 CACACGCCTCAGCAGCTCTCCTTGTTACTACTTTTACCAAG CACACACCTCAGCAGCTCTCCTTGTTACTACTTTTACCAAG < 41bp 1 0.279598167111929 1 0.181853532791138 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001406 chr12:121001391 nonsynonymous SNV 0.744 1 6 hm5C_associated_SNPs_39229 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:121001363-121001391
64251 chr22 20755039 20755039 1 + C A UCEC 20755030 + 20755010 20755050 41 ATGTGATGTTGGAGAACTACCAGAACCTTCTTGCCCTAGGT ATGTGATGTTGGAGAACTACCAGAACCTTATTGCCCTAGGT < 41bp 1 0.711401028382076 1 0.818691372871399 experiment 0.577197943235848 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20755030 chr22:20755039 nonsynonymous SNV 0.994 2 30 hm5C_associated_SNPs_39230 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:20754991-20755039
64251 chr7 101459313 101459313 1 + G A UCEC 101459315 + 101459295 101459335 41 CTCAATATGTCTCAAGATGGCGGCCAATGTGGGATCGATGT CTCAATATGTCTCAAGATAGCGGCCAATGTGGGATCGATGT < 41bp 1 0.145725354795989 1 0.407864540815353 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101459315 chr7:101459313 nonsynonymous SNV 0.823 1 19 hm5C_associated_SNPs_39231 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:101459300-101459320
64251 chr17 41296930 41296930 1 + C T UCEC 41296945 + 41296925 41296965 41 CACACCGCGGCCAGCAGGCACCTGGCACCCACCTTCCCTGC CACACTGCGGCCAGCAGGCACCTGGCACCCACCTTCCCTGC < 41bp 1 0.395642870815503 1 0.215029329061508 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NBR2 ENSG00000198496 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:41296945 chr17:41296930 . . 0 6 hm5C_associated_SNPs_39232 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:41296913-41296938
64251 chr21 40191467 40191467 1 + C G UCEC 40191451 + 40191431 40191471 41 TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGACAGCT TCCCAAAGACCACGACTCCCCTGAGAACGGTGCGGAGAGCT < 41bp 1 0.575968093362538 1 0.47706013917923 experiment 0.848063813274925 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ETS2 ENSG00000157557 CDS Human protein_coding chr21:40191451 chr21:40191467 nonsynonymous SNV 0.786 0 37 hm5C_associated_SNPs_39233 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr21:40191444-40191483
64251 chr3 37340494 37340494 1 + G T UCEC 37340497 + 37340477 37340517 41 TGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGTAAAA TGGATGAAAGACTTCAATAACTAGAAAAGATAAAGGTAAAA < 41bp 1 0.616867271626919 1 0.598400056362152 experiment 0.766265456746163 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37340497 chr3:37340494 stopgain 0.997 0 18 hm5C_associated_SNPs_39236 0 0 3 GRWD1 POSTAR2 ENCODE chr3:37340429-37340508
64251 chr12 21621560 21621560 1 + G A UCEC 21621565 + 21621545 21621585 41 GGACGAATGATGGGAGCTGTCTTAATTGGTGAAACCGATTT GGACGAATGATGGGAACTGTCTTAATTGGTGAAACCGATTT < 41bp 1 0.715227368494806 1 0.453475803136826 experiment 0.569545263010389 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21621565 chr12:21621560 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_39237 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:21621526-21621567
64251 chr12 27908161 27908161 1 + G T UCEC 27908142 + 27908122 27908162 41 AGAATGGGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGT AGAATGGGAAAAAAGTAAGACTGAAGCAGACATGGAAGATT < 41bp 1 0.598787623630984 1 0.454436451196671 experiment 0.802424752738033 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908142 chr12:27908161 nonsynonymous SNV 0.995 1 40 hm5C_associated_SNPs_39238 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr12 27908161 27908161 1 + G T UCEC 27908148 + 27908128 27908168 41 GGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGTATATAT GGAAAAAAGTAAGACTGAAGCAGACATGGAAGATTATATAT < 41bp 1 0.50018392606878 1 0.835422873497009 experiment 0.99963214786244 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908148 chr12:27908161 nonsynonymous SNV 0.995 1 34 hm5C_associated_SNPs_39239 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr11 47256905 47256905 1 + G T UCEC 47256916 + 47256896 47256936 41 AGTGGGACTGCCCCCTGGGCCTGATCCCGCACCCTCACCGT AGTGGGACTTCCCCCTGGGCCTGATCCCGCACCCTCACCGT < 41bp 1 0.500056991798344 1 0.0525939464569092 experiment 0.999886016403312 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256916 chr11:47256905 nonsynonymous SNV 0.003 0 10 hm5C_associated_SNPs_39241 0 0 1 PRPF8 POSTAR2 ENCODE chr11:47256900-47257010
64251 chr22 40662814 40662814 1 + C T UCEC 40662825 + 40662805 40662845 41 CTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGG CTGGAGCAGTGGGCCACAGCCTGCAACACCTAAGGATGAGG < 41bp 1 0.413463966034571 1 0.807057797908783 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40662825 chr22:40662814 synonymous SNV . 0 10 hm5C_associated_SNPs_39245 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr22:40662813-40662835
64251 chr19 39114733 39114733 1 + G C UCEC 39114721 + 39114701 39114741 41 TTGTTCTTTTTCTTAGGTACCAGTTCAACCCAGCCTTCTTT TTGTTCTTTTTCTTAGGTACCAGTTCAACCCACCCTTCTTT < 41bp 1 0.218100501500472 1 0.695310473442078 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39114721 chr19:39114733 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_39247 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39114702-39114736
64251 chr12 132514403 132514403 1 + C T UCEC 132514398 + 132514378 132514418 41 GCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCC GCAGCTGCGGCAGACCACGGCTCCATGCCTGCTGCAGTTCC < 41bp 1 0.561975536799118 1 0.981580018997192 experiment 0.876048926401765 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132514398 chr12:132514403 nonsynonymous SNV 0.014 1 26 hm5C_associated_SNPs_39249 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132514397-132514438
64251 chr1 227171800 227171800 1 + T C UCEC 227171811 + 227171791 227171831 41 CCAGGGACCTGCTGAAGGGCCACCCCTTCTTCTATGTGCCT CCAGGGACCCGCTGAAGGGCCACCCCTTCTTCTATGTGCCT < 41bp 1 0.196699275979951 1 0.0861896872520447 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171811 chr1:227171800 nonsynonymous SNV 0.939 4 10 hm5C_associated_SNPs_39250 0 0 10 DDX24 POSTAR2 ENCODE chr1:227171748-227171867
64251 chr19 46878978 46878978 1 + G A UCEC 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGCGACGAGCACAAGCGCTCCATGGTGGACTCGCTGGACAT < 41bp 1 0.477915656488408 1 0.472043454647064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878978 nonsynonymous SNV 0.007 2 22 hm5C_associated_SNPs_39251 0 0 6 GRWD1 POSTAR2 ENCODE chr19:46878904-46879006
64251 chr15 77241491 77241491 1 + G T UCEC 77241508 + 77241488 77241528 41 CTTGTTTCTCACCAGTGAAGCCACAGATTATGGCAGACAGC CTTTTTTCTCACCAGTGAAGCCACAGATTATGGCAGACAGC < 41bp 1 0.443818896383126 1 0.183861911296844 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RCN2 ENSG00000117906 CDS Human protein_coding chr15:77241508 chr15:77241491 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_39252 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:77241407-77242243
64251 chr10 105172966 105172966 1 + C T UCEC 105172958 + 105172938 105172978 41 CTTCCTACAGCCTGGACGCCCACTCACCCGACTCTCTTGCC CTTCCTACAGCCTGGACGCCCACTCACCTGACTCTCTTGCC < 41bp 1 0.105314079359621 1 0.0664258003234863 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172958 chr10:105172966 stopgain 0.005 0 29 hm5C_associated_SNPs_39253 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr14 21544741 21544741 1 + T G UCEC 21544752 + 21544732 21544772 41 ATCCTCCCCTTGTTCAGCGGCTGCTGATTCTCATTCATGAT ATCCTCCCCGTGTTCAGCGGCTGCTGATTCTCATTCATGAT < 41bp 1 0.15075957958949 1 0.138008564710617 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21544752 chr14:21544741 nonsynonymous SNV 0.816 0 10 hm5C_associated_SNPs_39254 0 0 3 NOL12 POSTAR2 ENCODE chr14:21544721-21544752
64251 chr17 16343398 16343398 1 + A T UCEC 16343379 + 16343359 16343399 41 GAAATCACTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC GAAATCACTAATAGGAAGTGCCGTCAGAAGCGATAACTGTC < 41bp 1 0.0272113204253479 1 0.168402314186096 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49A ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16343379 chr17:16343398 . . 0 40 hm5C_associated_SNPs_39255 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16343380-16343400
64251 chr17 16343398 16343398 1 + A T UCEC 16343415 + 16343395 16343435 41 CTGACGAAGACTACTCCTGTCTGATTGCAGTCAAGTCTTCA CTGTCGAAGACTACTCCTGTCTGATTGCAGTCAAGTCTTCA < 41bp 1 0.229096645959977 1 0.0480892360210419 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49A ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16343415 chr17:16343398 . . 0 4 hm5C_associated_SNPs_39256 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16343380-16343400
64251 chr7 35903184 35903184 1 + G A UCEC 35903183 + 35903163 35903203 41 TGAATCTGGATTGGGAAAGTCGACATTAATCAACTCATTAT TGAATCTGGATTGGGAAAGTCAACATTAATCAACTCATTAT < 41bp 1 0.645388185923411 1 0.24961319565773 experiment 0.709223628153177 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35903183 chr7:35903184 synonymous SNV . 0 22 hm5C_associated_SNPs_39257 0 0 2 BUD13 POSTAR2 ENCODE chr7:35903158-35903202
64251 chr3 32169669 32169669 1 + G T UCEC 32169667 + 32169647 32169687 41 TTTGAAGAAACAGTGAATGGCAGAAAACTGACAGACATCAT TTTGAAGAAACAGTGAATGGCATAAAACTGACAGACATCAT < 41bp 1 0.333703654024783 1 0.0931618809700012 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GPD1L ENSG00000152642 CDS Human protein_coding chr3:32169667 chr3:32169669 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_39258 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:32169638-32169676
64251 chr22 38201932 38201932 1 + G T UCEC 38201937 + 38201917 38201957 41 GGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCA GGCATCCAAGCCCAATAAGGCTGCCTCCAAAGCCCCAACCA < 41bp 1 0.418557338256604 1 0.321230351924896 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201937 chr22:38201932 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_39259 0 0 1 GRWD1 POSTAR2 ENCODE chr22:38201925-38201959
64251 chr5 34936298 34936298 1 + A C UCEC 34936300 + 34936280 34936320 41 AAATGATTGCCAAGGAAGAACTAGAATCTGTGTTAGAGGAA AAATGATTGCCAAGGAAGCACTAGAATCTGTGTTAGAGGAA < 41bp 1 0.717513675577741 1 0.458467900753021 experiment 0.564972648844517 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34936300 chr5:34936298 nonsynonymous SNV 0.999 4 19 hm5C_associated_SNPs_39260 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34936253-34936327
64251 chr5 73045767 73045767 1 + G T UCEC 73045760 + 73045740 73045780 41 GGATCTCATCAGCGACATGTCATGATTGCAGAGCGCATCGA GGATCTCATCAGCGACATGTCATGATTTCAGAGCGCATCGA < 41bp 1 0.703873579337228 1 0.0955105721950531 experiment 0.592252841325545 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73045760 chr5:73045767 nonsynonymous SNV 0.080 3 28 hm5C_associated_SNPs_39261 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr5:73045753-73045774
64251 chr2 24888643 24888643 1 + G T UCEC 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACGGAAAAGAGGCGCAGGGAGCAATAAAATAAATA < 41bp 1 0.293476707629863 1 0.575988411903381 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888643 stopgain 1.000 1 31 hm5C_associated_SNPs_39263 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:24888629-24888650
64251 chr19 49993817 49993817 1 + C A UCEC 49993825 + 49993805 49993845 41 CAGCCGCATCTTCTGGCGGACCGTGCGAGGTGAGCAGAGCG CAGCCGCATCTTATGGCGGACCGTGCGAGGTGAGCAGAGCG < 41bp 1 0.146632102573402 1 0.215157747268677 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993825 chr19:49993817 nonsynonymous SNV 0.945 0 13 hm5C_associated_SNPs_39264 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr13 114541073 114541073 1 - G A UCEC 114541062 - 114541042 114541082 41 CAGCGGCTTCGAGCTCTCCTCTGATGGCAGGACCTGCCAAG CAGCGGCTTTGAGCTCTCCTCTGATGGCAGGACCTGCCAAG < 41bp 1 0.520697988781786 1 0.269302636384964 experiment 0.958604022436429 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GAS6 ENSG00000183087 CDS Human protein_coding chr13:114541062 chr13:114541073 synonymous SNV . 0 10 hm5C_associated_SNPs_39265 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114541059-114541091
64251 chr1 117626674 117626674 1 + C A UCEC 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA TCCCATGGAACACTAATAATCTGTCCTGCCTCCCTGATCCA < 41bp 1 0.202533107764277 1 0.0795698761940002 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626674 synonymous SNV . 0 18 hm5C_associated_SNPs_39266 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117626608-117626693
64251 chr2 207175022 207175022 1 + G T UCEC 207175003 + 207174983 207175023 41 GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCATA < 41bp 1 0.0416578048681704 1 0.0206244289875031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175003 chr2:207175022 stopgain 0.101 0 40 hm5C_associated_SNPs_39267 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr2 207175022 207175022 1 + G T UCEC 207175004 + 207174984 207175024 41 TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCATAG < 41bp 1 0.28207074235849 1 0.052227109670639 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175004 chr2:207175022 stopgain 0.101 0 39 hm5C_associated_SNPs_39268 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr2 37319136 37319136 1 + C A UCEC 37319120 + 37319100 37319140 41 GCAGAGGAAAAATTGGAAAGCTACAGAAAAAAGATTCACAT GCAGAGGAAAAATTGGAAAGCTACAGAAAAAAGATTAACAT < 41bp 1 0.795311930222099 1 0.413083702325821 experiment 0.409376139555802 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37319120 chr2:37319136 nonsynonymous SNV 0.971 1 37 hm5C_associated_SNPs_39270 0 0 1 UCHL5 POSTAR2 ENCODE chr2:37319124-37319180
64251 chr5 145641095 145641095 1 + A C UCEC 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGGTGACCCAGCAGCAGCCCTAATCCAA < 41bp 1 0.113594659765116 1 0.292497396469116 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641095 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_39271 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145641088-145641134
64251 chr5 179151766 179151766 1 + G T UCEC 179151747 + 179151727 179151767 41 GAGAAGGAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGGA GAGAAGGAAGAGGAAAAGGACAAGGGAGATGAGGAGGAGTA < 41bp 1 0.788314614815866 1 0.593263387680054 experiment 0.423370770368267 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151747 chr5:179151766 stopgain 0.736 0 40 hm5C_associated_SNPs_39272 0 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:179151707-179151777
64251 chr5 179151766 179151766 1 + G T UCEC 179151781 + 179151761 179151801 41 AGGAGGAAGGAGAAGAGAAACTTGGTAAGAAACAGAGTCCA AGGAGTAAGGAGAAGAGAAACTTGGTAAGAAACAGAGTCCA < 41bp 1 0.694334343536083 1 0.32880049943924 experiment 0.611331312927835 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151781 chr5:179151766 stopgain 0.736 0 6 hm5C_associated_SNPs_39273 0 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:179151707-179151777
64251 chr19 40883729 40883729 1 + C T UCEC 40883722 + 40883702 40883742 41 GTGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGC GTGGTCCCCGCGGATGAGGCCCAGGCTTGAATCCCATATGC < 41bp 1 0.454914810842786 1 0.389963030815125 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883722 chr19:40883729 stopgain 0.948 1 28 hm5C_associated_SNPs_39274 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883705-40883737
64251 chr19 40883729 40883729 1 + C T UCEC 40883723 + 40883703 40883743 41 TGGTCCCCGCGGATGAGGCCCAGGCTCGAATCCCATATGCC TGGTCCCCGCGGATGAGGCCCAGGCTTGAATCCCATATGCC < 41bp 1 0.412404604426341 1 0.530036926269531 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLD3 ENSG00000105223 CDS Human protein_coding chr19:40883723 chr19:40883729 stopgain 0.948 1 27 hm5C_associated_SNPs_39275 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:40883705-40883737
64251 chr9 131847011 131847011 1 + C T UCEC 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTTGTGACCCT < 41bp 1 0.506633918966899 1 0.49877342581749 experiment 0.986732162066202 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131847011 synonymous SNV . 0 33 hm5C_associated_SNPs_39276 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:131846992-131847023
64251 chr12 53858594 53858594 1 + G A UCEC 53858580 + 53858560 53858600 41 GCAGCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATG GCAGCGACAGTGCGAGCTTTCCCCACACCACCCCATCCATG < 41bp 1 0.774237192231189 1 0.245456993579865 experiment 0.451525615537623 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53858580 chr12:53858594 synonymous SNV . 0 35 hm5C_associated_SNPs_39278 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:53858549-53858604
64251 chr12 53858594 53858594 1 + G A UCEC 53858583 + 53858563 53858603 41 GCGACAGTGCGAGCTTTCCCCACACCACCCCGTCCATGTGC GCGACAGTGCGAGCTTTCCCCACACCACCCCATCCATGTGC < 41bp 1 0.542784681957131 1 0.3618323802948 experiment 0.914430636085739 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53858583 chr12:53858594 synonymous SNV . 0 32 hm5C_associated_SNPs_39279 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:53858549-53858604
64251 chr12 53858594 53858594 1 + G A UCEC 53858610 + 53858590 53858630 41 CCCCGTCCATGTGCCTCAACCCTGACCTGGAGGGACCACCT CCCCATCCATGTGCCTCAACCCTGACCTGGAGGGACCACCT < 41bp 1 0.586887881627115 1 0.117970943450928 experiment 0.826224236745769 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCBP2 ENSG00000197111 CDS Human protein_coding chr12:53858610 chr12:53858594 synonymous SNV . 0 5 hm5C_associated_SNPs_39280 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:53858549-53858604
64251 chr7 100204078 100204078 1 + C T UCEC 100204090 + 100204070 100204110 41 GTCCAGTTCGTCTCAGATCTCAGTGTCACCGCTGATGGCTT GTCCAGTTTGTCTCAGATCTCAGTGTCACCGCTGATGGCTT < 41bp 1 0.486238965542957 1 0.699552714824677 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100204090 chr7:100204078 synonymous SNV . 0 9 hm5C_associated_SNPs_39283 0 0 4 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr7:100204060-100204080
64251 chr9 132630326 132630326 1 + G A UCEC 132630317 + 132630297 132630337 41 TCCTTCGCTGCCTGATGGACCAGCTGCACGAGGAGCTCAAG TCCTTCGCTGCCTGATGGACCAGCTGCACAAGGAGCTCAAG < 41bp 1 0.394584972165939 1 0.686662375926971 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP20 ENSG00000136878 CDS Human protein_coding chr9:132630317 chr9:132630326 nonsynonymous SNV 0.993 4 30 hm5C_associated_SNPs_39285 0 0 6 DDX24 POSTAR2 ENCODE chr9:132630299-132630326
64251 chr15 40509809 40509809 1 + C T UCEC 40509796 + 40509776 40509816 41 GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGT GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTTGGACTGT < 41bp 1 0.342724712563609 1 0.158111393451691 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509796 chr15:40509809 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_39287 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr15 40509809 40509809 1 + C T UCEC 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGGATGTTTTTACCCTCAGCGGCTTTTGGACTGTACAGAT < 41bp 1 0.359859290212882 1 0.541620194911957 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509802 chr15:40509809 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_39288 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr8 74893415 74893415 1 + G A UCEC 74893419 + 74893399 74893439 41 GTTTCTCTTATTCTACGAGTCTGATTGGCCTTACATTTCTG GTTTCTCTTATTCTACAAGTCTGATTGGCCTTACATTTCTG < 41bp 1 0.33446273187488 1 0.0806026756763458 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM70 ENSG00000175606 CDS Human protein_coding chr8:74893419 chr8:74893415 synonymous SNV . 0 17 hm5C_associated_SNPs_39289 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:74893394-74893415
64251 chr14 104145701 104145701 1 + T A UCEC 104145710 + 104145690 104145730 41 GTCAAACCATTTTCCCCTGCCTGGCTCACAGGGTCTTGACA GTCAAACCATTATCCCCTGCCTGGCTCACAGGGTCTTGACA < 41bp 1 0.157882333223198 1 0.153084605932236 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLC1 ENSG00000126214 CDS Human protein_coding chr14:104145710 chr14:104145701 nonsynonymous SNV 0.014 1 12 hm5C_associated_SNPs_39290 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr14:104145701-104145702
64251 chr3 38284249 38284249 1 + G T UCEC 38284259 + 38284239 38284279 41 CCGAGTGAAAGAATCAATATCAAATTCTGAGGTAAGTAATT CCGAGTGAAATAATCAATATCAAATTCTGAGGTAAGTAATT < 41bp 1 0.113973914703836 1 0.173069059848785 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38284259 chr3:38284249 stopgain 1.000 1 11 hm5C_associated_SNPs_39291 0 0 9 BUD13 POSTAR2 ENCODE chr3:38284219-38284268
64251 chrX 54838622 54838622 1 + G T UCEC 54838641 + 54838621 54838661 41 AGAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCC ATAATGACCACTTGTACATTCTTCTCAGCACCTTAGAGCCC < 41bp 1 0.130708744261842 1 0.062288761138916 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54838641 chrX:54838622 nonsynonymous SNV 0.993 3 2 hm5C_associated_SNPs_39292 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:54838607-54838635
64251 chr1 86048591 86048591 1 + G A UCEC 86048579 + 86048559 86048599 41 TGACCAGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGG TGACCAGGACTGTGAAGATGCGGTTCCGCTGCAAAGATGGG < 41bp 1 0.239452706109675 1 0.124694555997849 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048579 chr1:86048591 nonsynonymous SNV 0.993 1 33 hm5C_associated_SNPs_39293 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048591 86048591 1 + G A UCEC 86048584 + 86048564 86048604 41 AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAC AGGACTGTGAAGATGCGGTTCCGCTGCAAAGATGGGGAGAC < 41bp 1 0.34045024009003 1 0.112432837486267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048584 chr1:86048591 nonsynonymous SNV 0.993 1 28 hm5C_associated_SNPs_39294 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048591 86048591 1 + G A UCEC 86048585 + 86048565 86048605 41 GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACA GGACTGTGAAGATGCGGTTCCGCTGCAAAGATGGGGAGACA < 41bp 1 0.451935287919081 1 0.174147725105286 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048585 chr1:86048591 nonsynonymous SNV 0.993 1 27 hm5C_associated_SNPs_39295 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr11 66294147 66294147 1 + A C UCEC 66294153 + 66294133 66294173 41 CATCAAGATCCTGAAGCGTACAGCAGTGTTTGTAGAGGGAG CATCAAGATCCTGACGCGTACAGCAGTGTTTGTAGAGGGAG < 41bp 1 0.748680619258611 1 0.155292749404907 experiment 0.502638761482778 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66294153 chr11:66294147 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_39296 0 0 1 PPIG POSTAR2 ENCODE chr11:66294117-66294218
64251 chr21 47786906 47786906 1 + C A UCEC 47786911 + 47786891 47786931 41 TGTGGAAAAAGGACTCTCTTCACCAAACGATTTTGACTCAA TGTGGAAAAAGGACTATCTTCACCAAACGATTTTGACTCAA < 41bp 1 0.51164729648909 1 0.802573323249817 experiment 0.976705407021819 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47786911 chr21:47786906 nonsynonymous SNV 0.001 2 16 hm5C_associated_SNPs_39297 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:47786866-47786971
64251 chr13 100188896 100188896 1 + G A UCEC 100188911 + 100188891 100188931 41 GTTACGATGTTGAAGATGGTCAGAGGTTCTGTAATCCTGGA GTTACAATGTTGAAGATGGTCAGAGGTTCTGTAATCCTGGA < 41bp 1 0.766903989500504 1 0.346253991127014 experiment 0.466192020998991 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100188911 chr13:100188896 nonsynonymous SNV 0.883 1 6 hm5C_associated_SNPs_39303 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr13:100188862-100188931
64251 chr4 123160808 123160808 1 + T G UCEC 123160814 + 123160794 123160834 41 AAGTACTAAGAGTCTTACTGCTGCTTTCTATGGGGACAAGC AAGTACTAAGAGTCGTACTGCTGCTTTCTATGGGGACAAGC < 41bp 1 0.12105196120573 1 0.0729257166385651 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123160814 chr4:123160808 nonsynonymous SNV 0.976 3 15 hm5C_associated_SNPs_39305 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:123160770-123160808
64251 chr1 242030145 242030145 1 + G T UCEC 242030150 + 242030130 242030170 41 AGCCTGCCCATTCAAGAAGTCATAGTTGGGATGACAAAACA AGCCTGCCCATTCAATAAGTCATAGTTGGGATGACAAAACA < 41bp 1 0.241382639312012 1 0.0873810052871704 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXO1 ENSG00000174371 CDS Human protein_coding chr1:242030150 chr1:242030145 nonsynonymous SNV 0.837 4 16 hm5C_associated_SNPs_39306 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:242030107-242030145
64251 chr1 151006395 151006395 1 + G T UCEC 151006407 + 151006387 151006427 41 TCTCGAAAGAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC TCTCGAAATAAACTTCTGCCCCTGCTCCAGGAAGCCCTGTC < 41bp 1 0.128841492672565 1 0.0450774133205414 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006407 chr1:151006395 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_39307 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151006384-151006410
64251 chr4 87684016 87684016 1 + G T UCEC 87684010 + 87683990 87684030 41 CGTGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCC CGTGGTACCCTGAGGCACATCTCGGATAACTCCTTTGGGCC < 41bp 1 0.754421823165151 1 0.896433234214783 experiment 0.491156353669698 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87684010 chr4:87684016 nonsynonymous SNV 0.961 0 27 hm5C_associated_SNPs_39308 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:87683976-87684016
64251 chr4 87684016 87684016 1 + G T UCEC 87684012 + 87683992 87684032 41 TGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCCAT TGGTACCCTGAGGCACATCTCGGATAACTCCTTTGGGCCAT < 41bp 1 0.582973504738578 1 0.891029000282288 experiment 0.834052990522845 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87684012 chr4:87684016 nonsynonymous SNV 0.961 0 25 hm5C_associated_SNPs_39309 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:87683976-87684016
64251 chr5 134154652 134154652 1 + G T UCEC 134154670 + 134154650 134154690 41 AAGAACCCAAGGAAGGCGAGCGGAAGATTTACTTGGCAATT AATAACCCAAGGAAGGCGAGCGGAAGATTTACTTGGCAATT < 41bp 1 0.661936254514615 1 0.758071184158325 experiment 0.67612749097077 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134154670 chr5:134154652 stopgain 1.000 1 3 hm5C_associated_SNPs_39310 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:134154614-134154657
64251 chr19 49377604 49377604 1 + G T UCEC 49377587 + 49377567 49377607 41 TGAGGACAGTGACTCTGGATCAGATGAGGAAGAGGGAGAAG TGAGGACAGTGACTCTGGATCAGATGAGGAAGAGGGATAAG < 41bp 1 0.472058050677781 1 0.259373813867569 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377587 chr19:49377604 stopgain 0.628 1 38 hm5C_associated_SNPs_39311 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:49377542-49377605
64251 chr7 139094334 139094334 1 + A C UCEC 139094319 + 139094299 139094339 41 TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGAAAAGAA TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGACAAGAA < 41bp 1 0.517163113256059 1 0.208913445472717 experiment 0.965673773487882 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094319 chr7:139094334 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_39312 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094334 139094334 1 + A C UCEC 139094341 + 139094321 139094361 41 GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG GAGAAGCAGGAGACAAGAAACCAGGAACGGCTGAAACGAAG < 41bp 1 0.525000644875443 1 0.446681946516037 experiment 0.949998710249113 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094341 chr7:139094334 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_39313 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094334 139094334 1 + A C UCEC 139094348 + 139094328 139094368 41 AGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG AGGAGACAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG < 41bp 1 0.486530027729093 1 0.292359709739685 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094348 chr7:139094334 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_39314 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094334 139094334 1 + A C UCEC 139094351 + 139094331 139094371 41 AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA AGACAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA < 41bp 1 0.524529168214895 1 0.4171122610569 experiment 0.95094166357021 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094351 chr7:139094334 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_39315 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr19 35741399 35741399 1 + C T UCEC 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCCCGGCCAGCGTTGACAACCAGCTCAATGCCCAGCTGGCA < 41bp 1 0.471233429482234 1 0.559306919574738 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741399 synonymous SNV . 0 14 hm5C_associated_SNPs_39316 0 0 2 RBM15 POSTAR2 ENCODE chr19:35741353-35741400
64251 chr16 1550429 1550429 1 + A G UCEC 1550440 + 1550420 1550460 41 CACGTCAGCAAGGCTGTCCTCATCTGCCTGGCGCAACTCGG CACGTCAGCGAGGCTGTCCTCATCTGCCTGGCGCAACTCGG < 41bp 1 0.364116802795205 1 0.266157776117325 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550440 chr16:1550429 nonsynonymous SNV 0.654 3 10 hm5C_associated_SNPs_39320 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr16:1550396-1550454
64251 chr1 28975184 28975184 1 + G T UCEC 28975167 + 28975147 28975187 41 CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGAGATT CAACTCGATTGCTCTGCGTGCGGAATCGACATCAAGATATT < 41bp 1 0.717175501982371 1 0.75053346157074 experiment 0.565648996035257 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975167 chr1:28975184 . . 0 38 hm5C_associated_SNPs_39321 0 0 130 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr1 28975184 28975184 1 + G T UCEC 28975176 + 28975156 28975196 41 TGCTCTGCGTGCGGAATCGACATCAAGAGATTTCGGAAGCA TGCTCTGCGTGCGGAATCGACATCAAGATATTTCGGAAGCA < 41bp 1 0.569700862440325 1 0.0594179332256317 experiment 0.860598275119351 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975176 chr1:28975184 . . 0 29 hm5C_associated_SNPs_39322 0 0 130 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:28975140-28975200
64251 chr6 126210647 126210647 1 + G T UCEC 126210642 + 126210622 126210662 41 TGATGTTGAACTGAAGGGGGCGCTAGATTTAGAAACCTGTG TGATGTTGAACTGAAGGGGGCGCTATATTTAGAAACCTGTG < 41bp 1 0.294032923386003 1 0.373082548379898 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210642 chr6:126210647 nonsynonymous SNV 0.991 4 26 hm5C_associated_SNPs_39324 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:126210634-126210655
64251 chr17 45673810 45673810 1 + T G UCEC 45673802 + 45673782 45673822 41 GGACCAAACAAATGGGATTTCCCCTCATTTATGTGGAAGCT GGACCAAACAAATGGGATTTCCCCTCATGTATGTGGAAGCT < 41bp 1 0.142187886136834 1 0.0602296888828278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45673802 chr17:45673810 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_39325 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:45673737-45673815
64251 chr19 40718801 40718801 1 + G T UCEC 40718786 + 40718766 40718806 41 GGACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTG GGACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAATAACTG < 41bp 1 0.057309593311509 1 0.108490735292435 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718786 chr19:40718801 stopgain 1.000 0 36 hm5C_associated_SNPs_39326 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718801 40718801 1 + G T UCEC 40718787 + 40718767 40718807 41 GACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGG GACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAATAACTGG < 41bp 1 0.215891286820969 1 0.414656341075897 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718787 chr19:40718801 stopgain 1.000 0 35 hm5C_associated_SNPs_39327 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718801 40718801 1 + G T UCEC 40718788 + 40718768 40718808 41 ACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGT ACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAATAACTGGT < 41bp 1 0.226693283368256 1 0.630755841732025 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718788 chr19:40718801 stopgain 1.000 0 34 hm5C_associated_SNPs_39328 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718801 40718801 1 + G T UCEC 40718789 + 40718769 40718809 41 CATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTC CATGGAGCCGCGGTGGGCCCCCAAAGAAGGAATAACTGGTC < 41bp 1 0.208688356490712 1 0.655530154705048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718789 chr19:40718801 stopgain 1.000 0 33 hm5C_associated_SNPs_39329 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718801 40718801 1 + G T UCEC 40718790 + 40718770 40718810 41 ATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG ATGGAGCCGCGGTGGGCCCCCAAAGAAGGAATAACTGGTCG < 41bp 1 0.3591679400741 1 0.823045134544373 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718790 chr19:40718801 stopgain 1.000 0 32 hm5C_associated_SNPs_39330 0 0 1 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr17 46940286 46940286 1 + C A UCEC 46940294 + 46940274 46940314 41 GCCCCTTTGTTTCAATTGTCCAATTTGTGACAAGATCTTCC GCCCCTTTGTTTAAATTGTCCAATTTGTGACAAGATCTTCC < 41bp 1 0.114108801456432 1 0.141927272081375 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46940294 chr17:46940286 nonsynonymous SNV 0.731 0 13 hm5C_associated_SNPs_39333 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46940250-46940288
64251 chr13 113487180 113487180 1 + G A UCEC 113487177 + 113487157 113487197 41 GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCGG GAACTGCTTTTTTATAGGAGCGCAAGGAGCTGTTTTTCCGG < 41bp 1 0.429284512597813 1 0.30789703130722 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487177 chr13:113487180 nonsynonymous SNV 0.605 3 24 hm5C_associated_SNPs_39334 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:113487173-113487205
64251 chr19 48259803 48259803 1 + C T UCEC 48259799 + 48259779 48259819 41 CTGTAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAG CTGTAGCCCGAGGGCAACATCCTTTGAGACCGGTTCAAGAG < 41bp 1 0.0744638895625909 1 0.145956605672836 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259799 chr19:48259803 stopgain 0.513 0 25 hm5C_associated_SNPs_39335 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:48259794-48259830
64251 chr6 44274729 44274729 1 - G T UCEC 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CGTCGAGCTGTGCGTTTATCCATGGAGATCTTAAAGGCACC < 41bp 1 0.607874706809528 1 0.825486660003662 experiment 0.784250586380944 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274729 nonsynonymous SNV 0.148 2 18 hm5C_associated_SNPs_39336 0 0 3 GRWD1 POSTAR2 ENCODE chr6:44274661-44274751
64251 chr1 231401114 231401114 1 + G A UCEC 231401132 + 231401112 231401152 41 TGGCAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAA TGACAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAA < 41bp 1 0.388008004463519 1 0.0419053137302399 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401132 chr1:231401114 nonsynonymous SNV 0.998 2 3 hm5C_associated_SNPs_39340 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:231401090-231401118
64251 chr20 3520943 3520943 1 + A T UCEC 3520926 + 3520906 3520946 41 GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGATGG GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGTTGG < 41bp 1 0.0197781113786359 1 0.106897234916687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3520926 chr20:3520943 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_39341 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:3520941-3520972
64251 chr7 6631412 6631412 1 + C T UCEC 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGCCCTCAAGGGAACAAAGCCGATGACAGCTGGATGAGCT < 41bp 1 0.16843910611285 1 0.35232800245285 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631412 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_39342 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6631412 6631412 1 + C T UCEC 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGCCCTCAAGGGAACAAAGCCGATGACAGCTGGATGAGCTT < 41bp 1 0.376946984260668 1 0.517792344093323 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631412 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_39343 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr21 45876557 45876557 1 + G A UCEC 45876551 + 45876531 45876571 41 GGCACCGTGCGCCCACCTCGCCCCTCGCTCCTGCTGGTCTC GGCACCGTGCGCCCACCTCGCCCCTCACTCCTGCTGGTCTC < 41bp 1 0.362528081890746 1 0.235144913196564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876551 chr21:45876557 synonymous SNV . 0 27 hm5C_associated_SNPs_39344 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr21:45876522-45876563
64251 chr11 67258381 67258381 1 + C T UCEC 67258390 + 67258370 67258410 41 CTGTGGTGAGCCGAGAGCTGCAGGCCCTGGAGGCACGGATC CTGTGGTGAGCTGAGAGCTGCAGGCCCTGGAGGCACGGATC < 41bp 1 0.591498846492498 1 0.645862817764282 experiment 0.817002307015005 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AIP ENSG00000110711 CDS Human protein_coding chr11:67258390 chr11:67258381 stopgain 0.972 0 12 hm5C_associated_SNPs_39346 1 0 2 DROSHA POSTAR2 ENCODE chr11:67258348-67258397
64251 chr11 65273327 65273327 1 + G A UCEC 65273330 + 65273310 65273350 41 ACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGAG ACTGTAATGCTGGGTGGAAACATGTAACTTGTAGACTGGAG < 41bp 1 0.76923481549136 1 0.473975986242294 experiment 0.461530369017279 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273330 chr11:65273327 . . 0 18 hm5C_associated_SNPs_39347 0 0 114 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr11 65273327 65273327 1 + G A UCEC 65273337 + 65273317 65273357 41 TGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATAG TGCTGGGTGGAAACATGTAACTTGTAGACTGGAGAAGATAG < 41bp 1 0.687376201362697 1 0.118680000305176 experiment 0.625247597274606 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273337 chr11:65273327 . . 0 11 hm5C_associated_SNPs_39348 0 0 114 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65273240-65273460
64251 chr11 65267170 65267170 1 + G T UCEC 65267153 + 65267133 65267173 41 AAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAAT AAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAATAAT < 41bp 1 0.678890880122835 1 0.690313160419464 experiment 0.642218239754331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267153 chr11:65267170 . . 0 38 hm5C_associated_SNPs_39349 0 0 71 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr11:65266520-65267320
64251 chr3 37367176 37367176 1 + A C UCEC 37367165 + 37367145 37367185 41 TACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCA TACAACTAAAGTTAAGGAGGCACTGTTAATTCAAACTTGCA < 41bp 1 0.0706973943829179 1 0.0695053935050964 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367165 chr3:37367176 nonsynonymous SNV 0.033 0 32 hm5C_associated_SNPs_39350 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:37367160-37367200
64251 chr3 37367176 37367176 1 + A C UCEC 37367167 + 37367147 37367187 41 CAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACA CAACTAAAGTTAAGGAGGCACTGTTAATTCAAACTTGCACA < 41bp 1 0.0955740028517519 1 0.039103776216507 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367167 chr3:37367176 nonsynonymous SNV 0.033 0 30 hm5C_associated_SNPs_39351 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:37367160-37367200
64251 chr12 6979520 6979520 1 + C A UCEC 6979504 + 6979484 6979524 41 CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGG CTTCCTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTAGTGG < 41bp 1 0.118357918804843 1 0.0448572635650635 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979504 chr12:6979520 nonsynonymous SNV 0.976 4 37 hm5C_associated_SNPs_39352 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:6979473-6979521
64251 chr12 6979520 6979520 1 + C A UCEC 6979508 + 6979488 6979528 41 CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTCGTGGACAT CTTGTGGGTGGTGCTTCCCTCAAGCCCGAATTAGTGGACAT < 41bp 1 0.574196395797418 1 0.788998007774353 experiment 0.851607208405164 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPI1 ENSG00000111669 CDS Human protein_coding chr12:6979508 chr12:6979520 nonsynonymous SNV 0.976 4 33 hm5C_associated_SNPs_39353 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:6979473-6979521
64251 chr17 57644051 57644051 1 + G T UCEC 57644036 + 57644016 57644056 41 AGGAACTACTCCAACTTTTCCTATTCAGAAACAAAGAAAAA AGGAACTACTCCAACTTTTCCTATTCAGAAACAAATAAAAA < 41bp 1 0.089757825094531 1 0.0869445502758026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX40 ENSG00000108406 CDS Human protein_coding chr17:57644036 chr17:57644051 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_39371 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:57644018-57644053
64251 chr3 9515086 9515086 1 + G A UCEC 9515077 + 9515057 9515097 41 TGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTT TGCCCATGGTGTGCAGGGATCCTCAGCCCAAACTCCATCTT < 41bp 1 0.330293804792195 1 0.0412267446517944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515077 chr3:9515086 nonsynonymous SNV 0.999 1 30 hm5C_associated_SNPs_39372 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:9515067-9515143
64251 chr17 19237324 19237324 1 + G A UCEC 19237313 + 19237293 19237333 41 TTAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGACACTG TTAACCCTTTCCAGGTGAACCAGCCCCAGCCACTGACACTG < 41bp 1 0.511077916672685 1 0.365973562002182 experiment 0.97784416665463 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EPN2 ENSG00000072134 CDS Human protein_coding chr17:19237313 chr17:19237324 synonymous SNV . 0 32 hm5C_associated_SNPs_39373 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:19237315-19237339
64251 chr7 2485684 2485684 1 + C T UCEC 2485671 + 2485651 2485691 41 CCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTCGTGGGAC CCCTGGCTTTGCCCAGACCTCTCAAGGGCACTTTGTGGGAC < 41bp 1 0.680738204217342 1 0.851919233798981 experiment 0.638523591565316 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC101927181 ENSG00000175873 ncRNA_exonic Human other chr7:2485671 chr7:2485684 . . 0 34 hm5C_associated_SNPs_39374 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:2485630-2485702
64251 chr14 21556231 21556231 1 + C T UCEC 21556227 + 21556207 21556247 41 AGCAGCACTCCCACCCTGGCCAGTCGAGGGATCTTAGGGCT AGCAGCACTCCCACCCTGGCCAGTTGAGGGATCTTAGGGCT < 41bp 1 0.304015851868053 1 0.130868226289749 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21556227 chr14:21556231 stopgain 1.000 0 25 hm5C_associated_SNPs_39375 0 0 1 PPIG POSTAR2 ENCODE chr14:21556149-21556251
64251 chrX 154005109 154005109 1 + G T UCEC 154005114 + 154005094 154005134 41 GAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTT GAAGAAGAAGAAGAATAAAGCAAAAGAGGTAGAATTGGTTT < 41bp 1 0.722109522070525 1 0.610276341438293 experiment 0.555780955858951 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005114 chrX:154005109 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_39376 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chr20 37632415 37632415 1 + G A UCEC 37632421 + 37632401 37632441 41 GAAACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACT GAAACTGTTGTGTCAATGCTCATCGAGCAGGCTCGAGCACT < 41bp 1 0.352523156754734 1 0.064522922039032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632421 chr20:37632415 synonymous SNV . 0 15 hm5C_associated_SNPs_39377 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:37632381-37632471
64251 chr17 7814218 7814218 1 + C T UCEC 7814203 + 7814183 7814223 41 TACGCTACACCTCCGGGGTACGGGGCGGCCTTCAGCGCCGC TACGCTACACCTCCGGGGTACGGGGCGGCCTTCAGTGCCGC < 41bp 1 0.774556147435538 1 0.792243421077728 experiment 0.450887705128925 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122268;BS-seq with improved protocol;Spleen;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7814203 chr17:7814218 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_39378 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr17:7814215-7814243
64251 chr22 38201925 38201925 1 + A C UCEC 38201937 + 38201917 38201957 41 GGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCA GGCATCCACGCCCAAGAAGGCTGCCTCCAAAGCCCCAACCA < 41bp 1 0.442201377338665 1 0.166472494602203 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201937 chr22:38201925 nonsynonymous SNV 0.989 0 9 hm5C_associated_SNPs_39379 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38201893-38201929
64251 chr9 134354751 134354751 1 + G A UCEC 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGACCGTGCCTGGCAGCAGCCTGGACACTGAGATCTG < 41bp 1 0.267062778091664 1 0.53491348028183 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354751 nonsynonymous SNV 0.983 3 29 hm5C_associated_SNPs_39381 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:134354751-134354772
64251 chr15 25220518 25220518 1 + G A UCEC 25220529 + 25220509 25220549 41 TTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGA TTGGCAAGAATAGCAAGATGCTGCAGCACATTGACTATAGA < 41bp 1 0.581020943009675 1 0.490265488624573 experiment 0.83795811398065 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25220529 chr15:25220518 nonsynonymous SNV 0.997 1 10 hm5C_associated_SNPs_39382 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr15:25220500-25220520
64251 chr8 21844759 21844759 1 + T C UCEC 21844767 + 21844747 21844787 41 GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG GTAAGATCTACACTGGGGACCAAGTGCAGAAATCCTCTAAG < 41bp 1 0.347233274098431 1 0.639444231987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844767 chr8:21844759 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_39383 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:21844733-21844776
64251 chr1 162470024 162470024 1 + A C UCEC 162470019 + 162469999 162470039 41 CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT CTCATTGACTTTGGACTTAGCTTCACAGAAGGCAATCAGGT < 41bp 1 0.350634575281144 1 0.0740765929222107 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470019 chr1:162470024 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_39384 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469904-162470036
64251 chr1 145517308 145517308 1 + C T UCEC 145517304 + 145517284 145517324 41 ATGCTTGCTCTCTTCTTGGCCATGCGCTGCAGAGGCATGGA ATGCTTGCTCTCTTCTTGGCCATGTGCTGCAGAGGCATGGA < 41bp 1 0.133431278706047 1 0.172211319208145 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145517304 chr1:145517308 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_39385 0 0 3 DDX3X POSTAR2 ENCODE chr1:145517272-145517332
64251 chr10 103827231 103827231 1 + G A UCEC 103827230 + 103827210 103827250 41 GCCCCTCCAGTCCCCTGCTTCGAAGTGAAATCTTCAAACTG GCCCCTCCAGTCCCCTGCTTCAAAGTGAAATCTTCAAACTG < 41bp 1 0.468303213129477 1 0.408842027187347 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827230 chr10:103827231 nonsynonymous SNV 0.831 0 22 hm5C_associated_SNPs_39386 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:103827220-103827240
64251 chr5 10411479 10411479 1 + G T UCEC 10411473 + 10411453 10411493 41 ATTCTTATTTATTGGGAGACCAGGAAGAAAATGAAAACAGT ATTCTTATTTATTGGGAGACCAGGAATAAAATGAAAACAGT < 41bp 1 0.636578174341648 1 0.626469254493713 experiment 0.726843651316703 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10411473 chr5:10411479 stopgain 1.000 1 27 hm5C_associated_SNPs_39387 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:10411446-10411479
64251 chr1 44436750 44436750 1 + C T UCEC 44436760 + 44436740 44436780 41 CTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG CTTCGTGCTTTGTCAACGTTCTGTGGCCTTGGAGCTCTGTG < 41bp 1 0.440561446127617 1 0.213740170001984 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436760 chr1:44436750 nonsynonymous SNV 0.012 0 11 hm5C_associated_SNPs_39388 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44436739-44436777
64251 chr7 930591 930591 1 + C A UCEC 930607 + 930587 930627 41 GTATCATTTTCTGCACTCAGCGGACGGGGAGGGCTGTGCCA GTATAATTTTCTGCACTCAGCGGACGGGGAGGGCTGTGCCA < 41bp 1 0.487632257530374 1 0.784032225608826 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GET4 ENSG00000239857 CDS Human protein_coding chr7:930607 chr7:930591 nonsynonymous SNV 0.850 4 5 hm5C_associated_SNPs_39391 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:930564-930598
64251 chr20 44526721 44526721 1 + C A UCEC 44526703 + 44526683 44526723 41 GACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTC GACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTATC < 41bp 1 0.629660855918504 1 0.50862729549408 experiment 0.740678288162991 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44526703 chr20:44526721 nonsynonymous SNV 0.899 3 39 hm5C_associated_SNPs_39393 0 0 3 RPS3 POSTAR2 ENCODE chr20:44526642-44526734
64251 chr16 23700836 23700836 1 + C T UCEC 23700824 + 23700804 23700844 41 TTTTCATCCAGATCACCCTCCTTAAATATTTCCGCAATTAC TTTTCATCCAGATCACCCTCCTTAAATATTTCTGCAATTAC < 41bp 1 0.109203067149855 1 0.132362365722656 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700824 chr16:23700836 nonsynonymous SNV 0.998 3 33 hm5C_associated_SNPs_39394 0 0 18 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:23700814-23700836
64251 chr11 65267072 65267072 1 + G T UCEC 65267054 + 65267034 65267074 41 AAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGA AAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATTGA < 41bp 1 0.433393305066301 1 0.131114840507507 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267054 chr11:65267072 . . 0 39 hm5C_associated_SNPs_39395 0 0 62 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chr11 65267072 65267072 1 + G T UCEC 65267059 + 65267039 65267079 41 TAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGAT TAGTTAACGCATTTACTAAACGCAGACGAAAATTGAAAGAT < 41bp 1 0.435069760240893 1 0.485564857721329 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267059 chr11:65267072 . . 0 34 hm5C_associated_SNPs_39396 0 0 62 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chr11 65267072 65267072 1 + G T UCEC 65267061 + 65267041 65267081 41 GTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTA GTTAACGCATTTACTAAACGCAGACGAAAATTGAAAGATTA < 41bp 1 0.22913850703613 1 0.167847812175751 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267061 chr11:65267072 . . 0 32 hm5C_associated_SNPs_39397 0 0 62 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chr11 65267072 65267072 1 + G T UCEC 65267065 + 65267045 65267085 41 ACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTG ACGCATTTACTAAACGCAGACGAAAATTGAAAGATTAATTG < 41bp 1 0.396895923304292 1 0.41642290353775 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267065 chr11:65267072 . . 0 28 hm5C_associated_SNPs_39398 0 0 62 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chrX 123229233 123229233 1 + G T UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAATAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT < 41bp 1 0.475693464605398 1 0.543383181095123 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229233 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_39402 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chrX 71401658 71401658 1 + G A UCEC 71401639 + 71401619 71401659 41 AACAACAAGCTTCCAAGATGCCGCCCAAAGGAAAAAGTGGT AACAACAAGCTTCCAAGATGCCGCCCAAAGGAAAAAGTGAT < 41bp 1 0.139319802208412 1 0.280143409967422 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIN4 ENSG00000102309 CDS Human protein_coding chrX:71401639 chrX:71401658 nonsynonymous SNV 0.997 2 40 hm5C_associated_SNPs_39403 0 0 2 UCHL5 POSTAR2 ENCODE chrX:71401632-71401679
64251 chr12 104720179 104720179 1 + G A UCEC 104720169 + 104720149 104720189 41 GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA GCTTGCACAAGAAAAATTGGCTTAGAAACCATAGGGGTGAA < 41bp 1 0.224297347592138 1 0.0507263839244843 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720169 chr12:104720179 nonsynonymous SNV 0.901 0 31 hm5C_associated_SNPs_39404 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104720156-104720198
64251 chr1 180034367 180034367 1 + A G UCEC 180034360 + 180034340 180034380 41 ATCTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA ATCTCCAGCAGTGAAACTAGCAGCATTGTGCAGAAACTGAA < 41bp 1 0.601351176007477 1 0.244284898042679 experiment 0.797297647985045 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180034360 chr1:180034367 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_39405 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:180034360-180034380
64251 chr2 233656045 233656045 1 + G C UCEC 233656051 + 233656031 233656071 41 ATCAGTCTCAGGAAGCATCACAGTTTGAGAGGAAAGATGAA ATCAGTCTCAGGAACCATCACAGTTTGAGAGGAAAGATGAA < 41bp 1 0.154402517330756 1 0.619334757328033 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233656051 chr2:233656045 nonsynonymous SNV 0.940 0 15 hm5C_associated_SNPs_39407 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003587 chr2:233656028-233656049
64251 chr12 69128518 69128518 1 + A G UCEC 69128531 + 69128511 69128551 41 GTGGTTTAAGCATATGAATTCAGTTCCACAAAAACCTGCTT GTGGTTTGAGCATATGAATTCAGTTCCACAAAAACCTGCTT < 41bp 1 0.205794492230461 1 0.392956793308258 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69128531 chr12:69128518 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_39408 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69128486-69128518
64251 chr12 108961079 108961079 1 + C T UCEC 108961066 + 108961046 108961086 41 TAAGTCTCTGCTCTCCATACCAGTCAGCTGGGACATTTGGC TAAGTCTCTGCTCTCCATACCAGTCAGCTGGGATATTTGGC < 41bp 1 0.0652132453613697 1 0.318104296922684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ISCU ENSG00000136003 CDS Human protein_coding chr12:108961066 chr12:108961079 synonymous SNV . 0 34 hm5C_associated_SNPs_39409 0 0 3 PRPF8 POSTAR2 ENCODE chr12:108961018-108961081
64251 chr19 1055305 1055305 1 + T C UCEC 1055304 + 1055284 1055324 41 AGAACCTGACAGGCCGGAACCTGTCTGACTTCCTGGTCAAG AGAACCTGACAGGCCGGAACCCGTCTGACTTCCTGGTCAAG < 41bp 1 0.0467265799131949 1 0.0526978075504303 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1055304 chr19:1055305 nonsynonymous SNV 0.495 3 22 hm5C_associated_SNPs_39410 0 0 3 DDX3X POSTAR2 ENCODE chr19:1055294-1055351
64251 chr15 41192193 41192193 1 + C T UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAATGGGAGGCCCGAGATGTCTGGCGCACCTA < 41bp 1 0.335638953891639 1 0.487099021673203 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192193 nonsynonymous SNV 0.990 4 13 hm5C_associated_SNPs_39411 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr15 41192193 41192193 1 + C T UCEC 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAATGGGAGGCCCGAGATGTCTGGCGCACCTAT < 41bp 1 0.74363478042117 1 0.862459897994995 experiment 0.51273043915766 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192193 nonsynonymous SNV 0.990 4 12 hm5C_associated_SNPs_39412 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr19 19308390 19308390 1 + C G UCEC 19308370 + 19308350 19308390 41 CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGG < 41bp 1 0.349630605998159 1 0.0867907106876373 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308370 chr19:19308390 nonsynonymous SNV 0.050 3 41 hm5C_associated_SNPs_39413 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr19 19308390 19308390 1 + C G UCEC 19308371 + 19308351 19308391 41 CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGGC < 41bp 1 0.307401339105068 1 0.107650250196457 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308371 chr19:19308390 nonsynonymous SNV 0.050 3 40 hm5C_associated_SNPs_39414 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr16 30723164 30723164 1 + G A UCEC 30723169 + 30723149 30723189 41 CCTTTAGACTCTGTGGAGGACCGGAGTGAGGATGAGGAAGA CCTTTAGACTCTGTGAAGGACCGGAGTGAGGATGAGGAAGA < 41bp 1 0.450927977746993 1 0.325367152690887 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30723169 chr16:30723164 nonsynonymous SNV 0.882 2 16 hm5C_associated_SNPs_39415 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:30723161-30723182
64251 chr19 52196888 52196888 1 + C T UCEC 52196899 + 52196879 52196919 41 TACTCTGAGCGCCTCCGCATCTGCCAGATGTTTGTTGGGAT TACTCTGAGTGCCTCCGCATCTGCCAGATGTTTGTTGGGAT < 41bp 1 0.211078180899742 1 0.46190220117569 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPACA6 ENSG00000182310;ENSG00000273318 ncRNA_exonic Human other chr19:52196899 chr19:52196888 . . 0 10 hm5C_associated_SNPs_39419 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52196804-52196904
64251 chr13 27847408 27847408 1 + T C UCEC 27847416 + 27847396 27847436 41 TAGCCAATGAGCTGGGCAGCCTGTTCCTTGAAATTTCCACT TAGCCAATGAGCCGGGCAGCCTGTTCCTTGAAATTTCCACT < 41bp 1 0.202884173264947 1 0.0801596939563751 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RASL11A ENSG00000122035 CDS Human protein_coding chr13:27847416 chr13:27847408 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_39421 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:27847358-27847417
64251 chr16 81053827 81053827 1 + G A UCEC 81053845 + 81053825 81053865 41 CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC CCATACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC < 41bp 1 0.785586955960676 1 0.900131344795227 experiment 0.428826088078649 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPN ENSG00000166451 CDS Human protein_coding chr16:81053845 chr16:81053827 synonymous SNV . 0 3 hm5C_associated_SNPs_39423 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:81053814-81053828
64251 chr6 27101079 27101079 1 + A G UCEC 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGGCCC < 41bp 1 0.355899314303755 1 0.25939068198204 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101079 nonsynonymous SNV 0.946 2 38 hm5C_associated_SNPs_39426 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101079 27101079 1 + A G UCEC 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGGCCCG < 41bp 1 0.443929260797019 1 0.15404599905014 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101079 nonsynonymous SNV 0.946 2 37 hm5C_associated_SNPs_39427 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr14 64909120 64909120 1 + G A UCEC 64909115 + 64909095 64909135 41 TCAAGATGCACGGGGGCGGCCCCACGGTGAGTGGTGGGTTG TCAAGATGCACGGGGGCGGCCCCACAGTGAGTGGTGGGTTG < 41bp 1 0.187474700656197 1 0.329483270645142 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909115 chr14:64909120 synonymous SNV . 0 26 hm5C_associated_SNPs_39428 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:64909117-64909140
64251 chr19 14562725 14562725 1 + G A UCEC 14562705 + 14562685 14562725 41 ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGG ACCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGA < 41bp 1 0.135110239074447 1 0.080378919839859 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562705 chr19:14562725 nonsynonymous SNV 0.437 2 41 hm5C_associated_SNPs_39429 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr19 14562725 14562725 1 + G A UCEC 14562706 + 14562686 14562726 41 CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGG CCATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGAG < 41bp 1 0.0551300527191485 1 0.280269473791122 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562706 chr19:14562725 nonsynonymous SNV 0.437 2 40 hm5C_associated_SNPs_39430 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr19 14562725 14562725 1 + G A UCEC 14562708 + 14562688 14562728 41 ATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGGGAC ATCCCGTGGAACCCTACCCCCTCAATGGGGGGACCTGAGAC < 41bp 1 0.681484825061827 1 0.938106596469879 experiment 0.637030349876347 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562708 chr19:14562725 nonsynonymous SNV 0.437 2 38 hm5C_associated_SNPs_39431 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14562696-14562726
64251 chr6 43417262 43417262 1 + A T UCEC 43417260 + 43417240 43417280 41 TGCCAACAAGACAGTGCTGACCATTGCCCATAGGTATGTAA TGCCAACAAGACAGTGCTGACCTTTGCCCATAGGTATGTAA < 41bp 1 0.0192336986339172 1 0.0377053320407867 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43417260 chr6:43417262 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_39432 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:43417241-43417270
64251 chr2 32897376 32897376 1 + T C UCEC 32897396 + 32897376 32897416 41 TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG CAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG < 41bp 1 0.187079139673399 1 0.213230609893799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32897396 chr2:32897376 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_39433 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32897348-32897444
64251 chr12 69082803 69082803 1 + C T UCEC 69082818 + 69082798 69082838 41 CTGCACGGAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC CTGCATGGAAACAGAGTGCTCAGAAAAGAGTTTTACGTATC < 41bp 1 0.739784365077286 1 0.625642478466034 experiment 0.520431269845428 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69082818 chr12:69082803 nonsynonymous SNV 0.995 1 6 hm5C_associated_SNPs_39435 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:69082782-69082804
64251 chr19 36216690 36216690 1 + A G UCEC 36216704 + 36216684 36216724 41 TATCCAACCCGGGCCACGCGCAAACGGCGCCACTGGGTGAG TATCCAGCCCGGGCCACGCGCAAACGGCGCCACTGGGTGAG < 41bp 1 0.162901715575548 1 0.248447805643082 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216704 chr19:36216690 nonsynonymous SNV 0.999 5 7 hm5C_associated_SNPs_39436 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36216682-36216709
64251 chr6 36884249 36884249 1 + T A UCEC 36884229 + 36884209 36884249 41 ATACTTCTACAGGAGGAGACCTCTGAACAGATCACAAATGT ATACTTCTACAGGAGGAGACCTCTGAACAGATCACAAATGA < 41bp 1 0.215775970936069 1 0.446123540401459 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C6orf89 ENSG00000198663 CDS Human protein_coding chr6:36884229 chr6:36884249 nonsynonymous SNV 0.348 4 41 hm5C_associated_SNPs_39437 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr6:36884239-36884260
64251 chr10 104129687 104129687 1 + G A UCEC 104129695 + 104129675 104129715 41 GTCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCA GTCTAGTGTTCGAGGCCCATCCACTGAAAACCAAGAGGCCA < 41bp 1 0.15558142555161 1 0.432581961154938 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129695 chr10:104129687 synonymous SNV . 0 13 hm5C_associated_SNPs_39438 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr10 104129687 104129687 1 + G A UCEC 104129696 + 104129676 104129716 41 TCTAGTGTTCGGGGCCCATCCACTGAAAACCAAGAGGCCAA TCTAGTGTTCGAGGCCCATCCACTGAAAACCAAGAGGCCAA < 41bp 1 0.458632443641747 1 0.65564352273941 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GBF1 ENSG00000107862 CDS Human protein_coding chr10:104129696 chr10:104129687 synonymous SNV . 0 12 hm5C_associated_SNPs_39439 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:104129680-104129700
64251 chr19 3574393 3574393 1 + C T UCEC 3574378 + 3574358 3574398 41 AACGACGCAGCCCGGTTCTGCAGCCGGTGAAGAAACGCGGC AACGACGCAGCCCGGTTCTGCAGCCGGTGAAGAAATGCGGC < 41bp 1 0.520735260683765 1 0.619297325611115 experiment 0.958529478632471 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMG20B ENSG00000064961 CDS Human protein_coding chr19:3574378 chr19:3574393 nonsynonymous SNV 0.995 2 36 hm5C_associated_SNPs_39440 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:3574389-3574413
64251 chr11 610285 610285 1 + G A UCEC 610293 + 610273 610313 41 CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC CAGGTGTTCTCCAAGCTGCCCTTTCCCAGTCACGTGCTTCC < 41bp 1 0.0193835777486536 1 0.0175833106040955 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610293 chr11:610285 nonsynonymous SNV 0.007 2 13 hm5C_associated_SNPs_39441 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:610260-610289
64251 chr20 57289643 57289643 1 + G A UCEC 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCGAGACAACAGCCCCAGCTCCTGTACTGGCCTC < 41bp 1 0.413639356887233 1 0.46846216917038 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289643 nonsynonymous SNV 0.994 4 33 hm5C_associated_SNPs_39442 0 0 3 GRWD1 POSTAR2 ENCODE chr20:57289633-57289721
64251 chr21 47786895 47786895 1 + G T UCEC 47786911 + 47786891 47786931 41 TGTGGAAAAAGGACTCTCTTCACCAAACGATTTTGACTCAA TGTGTAAAAAGGACTCTCTTCACCAAACGATTTTGACTCAA < 41bp 1 0.451014912708749 1 0.788688063621521 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47786911 chr21:47786895 nonsynonymous SNV 0.001 0 5 hm5C_associated_SNPs_39443 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:47786866-47786971
64251 chr19 30499999 30499999 1 + G A UCEC 30500003 + 30499983 30500023 41 CAAATGTGAATGCGATGCATCAAGTAACAGACTCTCATACT CAAATGTGAATGCGATACATCAAGTAACAGACTCTCATACT < 41bp 1 0.579806845602908 1 0.195867419242859 experiment 0.840386308794185 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30500003 chr19:30499999 nonsynonymous SNV 0.002 0 17 hm5C_associated_SNPs_39444 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30499884-30500263
64251 chr16 4902950 4902950 1 + C A UCEC 4902930 + 4902910 4902950 41 TTGGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTC TTGGTAGCCATGTCGGAGCCCCACAGGGTCCAGTTCACCTA < 41bp 1 0.350116393824678 1 0.190715283155441 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN1 ENSG00000118900 CDS Human protein_coding chr16:4902930 chr16:4902950 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_39445 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:4902937-4902972
64251 chr16 15788055 15788055 1 + C T UCEC 15788047 + 15788027 15788067 41 GACGACTCCACCGGGGGGACCCCCCTCACACCTGCGGCCCG GACGACTCCACCGGGGGGACCCCCCTCATACCTGCGGCCCG < 41bp 1 0.177923150091764 1 0.0667369663715363 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDE1 ENSG00000072864 CDS Human protein_coding chr16:15788047 chr16:15788055 nonsynonymous SNV 0.089 4 29 hm5C_associated_SNPs_39446 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:15788053-15788101
64251 chr11 63743727 63743727 1 + G A UCEC 63743738 + 63743718 63743758 41 TCCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCT TCCTGCTTCATGACCTTCCTCCTGCCAGCGGGCTGGATCCT < 41bp 1 0.150314487025934 1 0.212983936071396 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743738 chr11:63743727 nonsynonymous SNV 0.005 2 10 hm5C_associated_SNPs_39447 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr11 63743727 63743727 1 + G A UCEC 63743739 + 63743719 63743759 41 CCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG CCTGCTTCATGACCTTCCTCCTGCCAGCGGGCTGGATCCTG < 41bp 1 0.44402193590715 1 0.285111010074615 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743739 chr11:63743727 nonsynonymous SNV 0.005 2 9 hm5C_associated_SNPs_39448 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr12 112235978 112235978 1 + C T UCEC 112235998 + 112235978 112236018 41 CGTGGTTACTTCATCCAGCCCACTGTGTTTGGAGATGTGCA TGTGGTTACTTCATCCAGCCCACTGTGTTTGGAGATGTGCA < 41bp 1 0.194681029565728 1 0.071449339389801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALDH2 ENSG00000111275 CDS Human protein_coding chr12:112235998 chr12:112235978 nonsynonymous SNV 0.890 2 1 hm5C_associated_SNPs_39451 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:112235969-112235992
64251 chr1 44069412 44069412 1 + G A UCEC 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGCACGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.399762512282527 1 0.0552957653999329 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069412 synonymous SNV . 0 15 hm5C_associated_SNPs_39452 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr22 32270346 32270346 1 + C T UCEC 32270365 + 32270345 32270385 41 ACGTGGAGGGGATCCAGACACAGGCGATGGCCATTGACATC ATGTGGAGGGGATCCAGACACAGGCGATGGCCATTGACATC < 41bp 1 0.771046869822484 1 0.681865572929382 experiment 0.457906260355033 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32270365 chr22:32270346 synonymous SNV . 0 2 hm5C_associated_SNPs_39453 0 0 1 PRPF8 POSTAR2 ENCODE chr22:32270346-32270429
64251 chr5 33466984 33466984 1 + A G UCEC 33466993 + 33466973 33467013 41 TAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA TAGGTACGACAGCAATTCCACGATGCCAAATTCATGGCAGA < 41bp 1 0.20535598826906 1 0.201243489980698 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33466993 chr5:33466984 synonymous SNV . 0 12 hm5C_associated_SNPs_39454 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33466955-33467001
64251 chr2 209189995 209189995 1 + A G UCEC 209190000 + 209189980 209190020 41 GTTTTTGTTTGTAGAACAAACCAAGACACTGATGTTTTTTG GTTTTTGTTTGTAGAGCAAACCAAGACACTGATGTTTTTTG < 41bp 1 0.100658298222141 1 0.174653828144073 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209190000 chr2:209189995 synonymous SNV . 0 16 hm5C_associated_SNPs_39455 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:209189995-209189996
64251 chr2 173352749 173352749 1 + G A UCEC 173352763 + 173352743 173352783 41 TGAACTGCTTTTATCGGTCTCGGGGTAAGTGTTTGTGTTTA TGAACTACTTTTATCGGTCTCGGGGTAAGTGTTTGTGTTTA < 41bp 1 0.692584506938052 1 0.906514644622803 experiment 0.614830986123896 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173352763 chr2:173352749 synonymous SNV . 0 7 hm5C_associated_SNPs_39456 0 0 1 PRPF8 POSTAR2 ENCODE chr2:173352743-173352800
64251 chr5 179151676 179151676 1 + G A UCEC 179151661 + 179151641 179151681 41 TTTGGGGAACATTTCAGAAACAGACCAGTGGTATGGAGTAT TTTGGGGAACATTTCAGAAACAGACCAGTGGTATGAAGTAT < 41bp 1 0.225209203776019 1 0.226558208465576 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151661 chr5:179151676 nonsynonymous SNV 0.912 1 36 hm5C_associated_SNPs_39457 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151676 179151676 1 + G A UCEC 179151665 + 179151645 179151685 41 GGGAACATTTCAGAAACAGACCAGTGGTATGGAGTATAAGA GGGAACATTTCAGAAACAGACCAGTGGTATGAAGTATAAGA < 41bp 1 0.205705711306084 1 0.0717135071754456 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151665 chr5:179151676 nonsynonymous SNV 0.912 1 32 hm5C_associated_SNPs_39458 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151676 179151676 1 + G A UCEC 179151689 + 179151669 179151709 41 TGGTATGGAGTATAAGAAAACTGATGCACCTCAACCGGATG TGGTATGAAGTATAAGAAAACTGATGCACCTCAACCGGATG < 41bp 1 0.453344356477707 1 0.364013880491257 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151689 chr5:179151676 nonsynonymous SNV 0.912 1 8 hm5C_associated_SNPs_39459 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr11 9456541 9456541 1 + C T UCEC 9456531 + 9456511 9456551 41 CAGTTGATACAGACACACTTCTGTCTGACACCAAGTATCTT CAGTTGATACAGACACACTTCTGTCTGACATCAAGTATCTT < 41bp 1 0.124630311832593 1 0.151549518108368 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9456531 chr11:9456541 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_39460 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9456502-9456562
64251 chr20 62373310 62373310 1 + C T UCEC 62373328 + 62373308 62373348 41 GACCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC GATCTGGCCAGTGACCAGTCCTCTCCGTCCACCCCGTCACC < 41bp 1 0.0965750841542452 1 0.0432239472866058 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373328 chr20:62373310 synonymous SNV . 0 3 hm5C_associated_SNPs_39461 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:62373286-62373315
64251 chr1 39799719 39799719 1 + G T UCEC 39799715 + 39799695 39799735 41 ACAGTTGTGCAGTCCATTGACAGAGGTCTTTTGGAGAGAGA ACAGTTGTGCAGTCCATTGACAGATGTCTTTTGGAGAGAGA < 41bp 1 0.121627041857052 1 0.647125244140625 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MACF1 ENSG00000127603 CDS Human protein_coding chr1:39799715 chr1:39799719 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_39463 0 0 1 SAFB2 POSTAR2 ENCODE chr1:39799710-39799813
64251 chr11 10774294 10774294 1 + C A UCEC 10774299 + 10774279 10774319 41 CAGGAACACACACAACTGCACATATGGATTGCTTTGGCGGT CAGGAACACACACAAATGCACATATGGATTGCTTTGGCGGT < 41bp 1 0.0799541728936119 1 0.0257505178451538 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10774299 chr11:10774294 nonsynonymous SNV 0.997 2 16 hm5C_associated_SNPs_39464 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10774271-10774303
64251 chr11 10774294 10774294 1 + C A UCEC 10774310 + 10774290 10774330 41 ACAACTGCACATATGGATTGCTTTGGCGGTCAGTATTCATG ACAAATGCACATATGGATTGCTTTGGCGGTCAGTATTCATG < 41bp 1 0.0848543029941814 1 0.0118987560272217 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTR9 ENSG00000198730 CDS Human protein_coding chr11:10774310 chr11:10774294 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_39465 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10774271-10774303
64251 chr9 96420503 96420503 1 + G A UCEC 96420497 + 96420477 96420517 41 AAAATTCTCAATGGTGCTTTCCGATCGTGGACGAAGAAGCA AAAATTCTCAATGGTGCTTTCCGATCATGGACGAAGAAGCA < 41bp 1 0.070917336261729 1 0.529219090938568 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96420497 chr9:96420503 synonymous SNV . 0 27 hm5C_associated_SNPs_39476 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:96420479-96420514
64251 chr19 54377323 54377323 1 + G T UCEC 54377326 + 54377306 54377346 41 CTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTT CTGCTGAAGGTGCTGGATACCTTCGTTGCCTGCATCATCTT < 41bp 1 0.524548617662028 1 0.41716143488884 experiment 0.950902764675945 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377326 chr19:54377323 nonsynonymous SNV 0.997 4 18 hm5C_associated_SNPs_39477 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:54377297-54377349
64251 chr4 1332373 1332373 1 + A G UCEC 1332384 + 1332364 1332404 41 CCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAA CCGCCCATGGTGCTGCCCAACGGCTACGTCTACGGCTACAA < 41bp 1 0.665100428933961 1 0.409021198749542 experiment 0.669799142132079 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAEA ENSG00000090316 CDS Human protein_coding chr4:1332384 chr4:1332373 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_39479 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:1332338-1332374
64251 chr19 6743025 6743025 1 + A C UCEC 6743009 + 6742989 6743029 41 AACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT AACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGCCTTT < 41bp 1 0.767486155416778 1 0.792683780193329 experiment 0.465027689166443 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743009 chr19:6743025 nonsynonymous SNV 0.979 2 37 hm5C_associated_SNPs_39480 0 0 4 LIN28B POSTAR2 ENCODE chr19:6743004-6743067
64251 chr2 238976793 238976793 1 + C A UCEC 238976802 + 238976782 238976822 41 AATCTTCACTTCCGGGGGCACTGAGGTAAAGCTTCTGAACA AATCTTCACTTACGGGGGCACTGAGGTAAAGCTTCTGAACA < 41bp 1 0.355545893536814 1 0.154011338949203 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCLY ENSG00000132330 CDS Human protein_coding chr2:238976802 chr2:238976793 nonsynonymous SNV 0.600 5 12 hm5C_associated_SNPs_39481 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:238976777-238976804
64251 chr4 113189384 113189384 1 + A C UCEC 113189402 + 113189382 113189422 41 GAAGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCA GACGACTGGAAGTAATCCTACATCAGCCTCTGATGATTCCA < 41bp 1 0.390898365941388 1 0.070795089006424 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP1AR ENSG00000138660 CDS Human protein_coding chr4:113189402 chr4:113189384 nonsynonymous SNV 0.964 2 3 hm5C_associated_SNPs_39482 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:113189355-113189391
64251 chr10 75506643 75506643 1 + C T UCEC 75506660 + 75506640 75506680 41 AGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGG AGCTCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGG < 41bp 1 0.607321903861804 1 0.275574505329132 experiment 0.785356192276393 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75506660 chr10:75506643 nonsynonymous SNV 0.894 3 4 hm5C_associated_SNPs_39483 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:75506618-75506654
64251 chr5 112868663 112868663 1 + G A UCEC 112868670 + 112868650 112868690 41 ATTGGCAGCTATCGCTGTGGCTGAAAGAGTTGCCGCAGAGA ATTGGCAGCTATCACTGTGGCTGAAAGAGTTGCCGCAGAGA < 41bp 1 0.77120599896092 1 0.507181167602539 experiment 0.457588002078161 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868670 chr5:112868663 nonsynonymous SNV 0.991 1 14 hm5C_associated_SNPs_39484 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868663 112868663 1 + G A UCEC 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CACTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA < 41bp 1 0.50189234308597 1 0.0923890769481659 experiment 0.996215313828059 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868663 nonsynonymous SNV 0.991 1 2 hm5C_associated_SNPs_39485 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868663 112868663 1 + G A UCEC 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT ACTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT < 41bp 1 0.611604778415665 1 0.714749813079834 experiment 0.776790443168669 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868663 nonsynonymous SNV 0.991 1 1 hm5C_associated_SNPs_39486 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr2 200820558 200820558 1 + C T UCEC 200820570 + 200820550 200820590 41 AGTTCCTGCACTCTCGGTCGCTGCCCTGCGGGGCCGTCCGA AGTTCCTGTACTCTCGGTCGCTGCCCTGCGGGGCCGTCCGA < 41bp 1 0.766728470894808 1 0.096884548664093 experiment 0.466543058210383 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820570 chr2:200820558 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_39487 0 0 12 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:200820542-200820577
64251 chr20 2635125 2635125 1 + C A UCEC 2635143 + 2635123 2635163 41 TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCCGCAATA TAATCTTGGGAGTTGGGGATCCCAAGATTGGTGCCGCAATA < 41bp 1 0.554773737911943 1 0.151892215013504 experiment 0.890452524176114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635143 chr20:2635125 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_39488 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr6 138727146 138727146 1 + G A UCEC 138727165 + 138727145 138727185 41 CGTGGAGCCTGGTTCAGGTCCTTTTAGTGAGTCTACCATTA CATGGAGCCTGGTTCAGGTCCTTTTAGTGAGTCTACCATTA < 41bp 1 0.0804513566133072 1 0.01893350481987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138727165 chr6:138727146 nonsynonymous SNV 0.991 2 2 hm5C_associated_SNPs_39489 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:138727124-138727146
64251 chr12 95897859 95897859 1 + C T UCEC 95897862 + 95897842 95897882 41 GTGCTGGAATTGATGTTCGTCTGTGTGATGTTGGTGAGGCC GTGCTGGAATTGATGTTTGTCTGTGTGATGTTGGTGAGGCC < 41bp 1 0.550104769133932 1 0.656402468681335 experiment 0.899790461732136 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95897862 chr12:95897859 nonsynonymous SNV 0.992 4 18 hm5C_associated_SNPs_39490 0 0 31 CELF2 POSTAR2 GSE71264,GSM1831620 chr12:95897840-95897860
64251 chr14 68042173 68042173 1 + G A UCEC 68042177 + 68042157 68042197 41 ATCTTCTACTACTATCGGAGCCATGAGGACAAGGTACTTCT ATCTTCTACTACTATCAGAGCCATGAGGACAAGGTACTTCT < 41bp 1 0.0473085443683196 1 0.0995316207408905 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68042177 chr14:68042173 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_39492 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:68042157-68042185
64251 chr6 3015784 3015784 1 + C T UCEC 3015789 + 3015769 3015809 41 GCTGTACTGGTTCAGCGTGCCAGCCATCCTGAAGGGCTGGA GCTGTACTGGTTCAGTGTGCCAGCCATCCTGAAGGGCTGGA < 41bp 1 0.432955098077166 1 0.285855293273926 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015789 chr6:3015784 synonymous SNV . 0 16 hm5C_associated_SNPs_39493 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr2 102486197 102486197 1 + C T UCEC 102486184 + 102486164 102486204 41 CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG CAGTGAGGAGTCGGGGACGACGGATGAGGAGGATGACGATG < 41bp 1 0.726087963054487 1 0.558166563510895 experiment 0.547824073891025 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486184 chr2:102486197 synonymous SNV . 0 34 hm5C_associated_SNPs_39494 0 0 7 FMR1 POSTAR2 ENCODE chr2:102486153-102486258
64251 chr10 115485138 115485138 1 + A G UCEC 115485145 + 115485125 115485165 41 TGAAGAGGACCATACAAATGCCGCCTGCTTCGCCTGCATCC TGAAGAGGACCATGCAAATGCCGCCTGCTTCGCCTGCATCC < 41bp 1 0.294518568555785 1 0.113142400979996 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CASP7 ENSG00000165806 CDS Human protein_coding chr10:115485145 chr10:115485138 nonsynonymous SNV 0.969 1 14 hm5C_associated_SNPs_39496 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:115485120-115485144
64251 chr10 102763495 102763495 1 + T G UCEC 102763493 + 102763473 102763513 41 TGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCGACT TGGCTGGGCCAGTGGCTGCCCAGCAGGGACGCTATCCGACT < 41bp 1 0.77044851940275 1 0.738530933856964 experiment 0.459102961194501 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763493 chr10:102763495 nonsynonymous SNV 0.434 2 23 hm5C_associated_SNPs_39499 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr10:102763495-102763496
64251 chr11 65267975 65267975 1 + G T UCEC 65267961 + 65267941 65267981 41 ATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTC ATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCATCAGTTC < 41bp 1 0.629412906272839 1 0.354934632778168 experiment 0.741174187454322 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267961 chr11:65267975 . . 0 35 hm5C_associated_SNPs_39501 0 0 64 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr11 65267975 65267975 1 + G T UCEC 65267973 + 65267953 65267993 41 CTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATA CTGAGGAGCAAGCGAGCAAGCATCAGTTCGTGGTGAAGATA < 41bp 1 0.662307116476437 1 0.429151386022568 experiment 0.675385767047126 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267973 chr11:65267975 . . 0 23 hm5C_associated_SNPs_39502 0 0 64 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267920-65268020
64251 chr7 150769155 150769155 1 + A G UCEC 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCCGCTTCGCCCAGGAGATCTTCGCCTTCTTGATCTCACT < 41bp 1 0.0836943010483205 1 0.0537152588367462 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769155 nonsynonymous SNV 1.000 5 10 hm5C_associated_SNPs_39503 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chr2 219269098 219269098 1 + C T UCEC 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGCAACTCAGCTGTGTGGACGACGTGTACTCAGTGCTCAG < 41bp 1 0.599249308258323 1 0.203542053699493 experiment 0.801501383483354 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269098 nonsynonymous SNV 0.998 3 13 hm5C_associated_SNPs_39505 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:219269089-219269112
64251 chr8 6302721 6302721 1 + G A UCEC 6302737 + 6302717 6302757 41 GGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGA GGCCATGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGA < 41bp 1 0.565560479782646 1 0.138455152511597 experiment 0.868879040434708 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302737 chr8:6302721 nonsynonymous SNV 0.000 0 5 hm5C_associated_SNPs_39506 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr8:6302702-6302730
64251 chr2 231931701 231931701 1 + G A UCEC 231931688 + 231931668 231931708 41 TGCCTGAAGGAGAAAAAAAACCAATTGACCAGAGATTGGAA TGCCTGAAGGAGAAAAAAAACCAATTGACCAGAAATTGGAA < 41bp 1 0.166113249478852 1 0.179033100605011 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931688 chr2:231931701 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_39507 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr2 231931701 231931701 1 + G A UCEC 231931696 + 231931676 231931716 41 GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATCGT GGAGAAAAAAAACCAATTGACCAGAAATTGGAAGGCATCGT < 41bp 1 0.532981947909068 1 0.0589966475963593 experiment 0.934036104181864 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931696 chr2:231931701 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_39508 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr20 43052669 43052669 1 + C T UCEC 43052674 + 43052654 43052694 41 GTAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCG GTAGATGCCAAGGGGTTGAGCGATCCAGGGAAGATCAAGCG < 41bp 1 0.169677987506017 1 0.687112629413605 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052674 chr20:43052669 synonymous SNV . 0 16 hm5C_associated_SNPs_39509 0 0 1 U2AF2 POSTAR2 ENCODE chr20:43052596-43052715
64251 chr12 88439535 88439535 1 + A G UCEC 88439525 + 88439505 88439545 41 TTAGAACAAACACTGGAACTCATAGGAACAAATATCAATGG TTAGAACAAACACTGGAACTCATAGGAACAGATATCAATGG < 41bp 1 0.477597656908604 1 0.336816757917404 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88439525 chr12:88439535 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_39510 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:88439477-88439540
64251 chr10 70100940 70100940 1 + C T UCEC 70100936 + 70100916 70100956 41 TTTCCTTTTATTTAGTTCTTCTCACCACTAAATCCAATACG TTTCCTTTTATTTAGTTCTTCTCATCACTAAATCCAATACG < 41bp 1 0.18462297344829 1 0.0835807323455811 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPH3 ENSG00000096746;ENSG00000204130 CDS Human other chr10:70100936 chr10:70100940 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_39512 0 0 25 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:70100911-70100944
64251 chr11 557915 557915 1 - C T UCEC 557932 - 557912 557952 41 TGCCTCCTGCAGCTGGCCCGCTCCTCGTGGGTGGGCCGCAT TGCCTCCTGCAGCTGGCCCGCTCCTCGTGGGTGGGCCACAT < 41bp 1 0.27674795980839 1 0.419878095388412 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMNTD2 ENSG00000185522 CDS Human protein_coding chr11:557932 chr11:557915 nonsynonymous SNV 0.027 3 38 hm5C_associated_SNPs_39513 0 0 1 PRPF8 POSTAR2 ENCODE chr11:557849-557916
64251 chr10 70962725 70962725 1 + C A UCEC 70962706 + 70962686 70962726 41 AAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTCT AAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTAT < 41bp 1 0.152140833672211 1 0.427017331123352 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70962706 chr10:70962725 nonsynonymous SNV 0.996 4 40 hm5C_associated_SNPs_39514 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:70962709-70962740
64251 chr19 50983465 50983465 1 + T C UCEC 50983456 + 50983436 50983476 41 GGAAGCTGGTGGCTATGTCTCCTCCTTTGTCCCTGCGGTGA GGAAGCTGGTGGCTATGTCTCCTCCTTTGCCCCTGCGGTGA < 41bp 1 0.149215245435384 1 0.34333074092865 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMC10 ENSG00000161671 CDS Human protein_coding chr19:50983456 chr19:50983465 nonsynonymous SNV 0.580 4 30 hm5C_associated_SNPs_39515 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:50983465-50983466
64251 chr3 196304508 196304508 1 + T C UCEC 196304496 + 196304476 196304516 41 GGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGTGGCAGTGA GGAAGTGTGGTGGGAGGGCCCTCTGGGCACTGCGGCAGTGA < 41bp 1 0.71969216917057 1 0.285483658313751 experiment 0.560615661658859 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196304496 chr3:196304508 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_39516 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:196304489-196304513
64251 chr14 45620662 45620662 1 + A G UCEC 45620670 + 45620650 45620690 41 AAGGGATATCCCAAATCTAACAAAATATCAGATAATTCTGG AAGGGATATCCCGAATCTAACAAAATATCAGATAATTCTGG < 41bp 1 0.443167667794226 1 0.728365421295166 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FANCM ENSG00000187790 CDS Human protein_coding chr14:45620670 chr14:45620662 synonymous SNV . 0 13 hm5C_associated_SNPs_39517 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:45620654-45620680
64251 chr9 35733461 35733461 1 + T G UCEC 35733471 + 35733451 35733491 41 TTATTCTGCCTGAGACACTTCCTCTCACTAAGGTAAGACTC TTATTCTGCCGGAGACACTTCCTCTCACTAAGGTAAGACTC < 41bp 1 0.0441546115907663 1 0.207539737224579 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733471 chr9:35733461 synonymous SNV . 0 11 hm5C_associated_SNPs_39518 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:35733430-35733462
64251 chr19 54969670 54969670 1 + G A UCEC 54969650 + 54969630 54969670 41 ATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGCG ATGTCTGGCTACCTCGTGGACAAGTTTGCAGATCGGGAGCA < 41bp 1 0.411630550777961 1 0.218776881694794 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969650 chr19:54969670 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_39519 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr19 54969670 54969670 1 + G A UCEC 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCACAAGGTCGCCCTCAAGGCCATGATCAAAAC < 41bp 1 0.12431812035585 1 0.172753095626831 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969670 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_39520 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr13 24858308 24858308 1 + G A UCEC 24858291 + 24858271 24858311 41 AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGG AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAATGG < 41bp 1 0.147419914725411 1 0.193182200193405 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24858291 chr13:24858308 nonsynonymous SNV 0.763 0 38 hm5C_associated_SNPs_39522 0 0 1 DGCR8 POSTAR2 ENCODE chr13:24858286-24858317
64251 chrX 56592144 56592144 1 + C T UCEC 56592147 + 56592127 56592167 41 AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCTGGGCT AGGAGGCGACATCAATGTAGCCATTGAAAGGCTGCTGGGCT < 41bp 1 0.0815631775095636 1 0.173057228326797 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592147 chrX:56592144 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_39530 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:56592109-56592145
64251 chr10 60580151 60580151 1 + C T UCEC 60580149 + 60580129 60580169 41 ATCGATCTTCAGACATTCCTCACTCTCACAGATCAGGATCT ATCGATCTTCAGACATTCCTCATTCTCACAGATCAGGATCT < 41bp 1 0.0302411117407745 1 0.120138823986053 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60580149 chr10:60580151 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_39531 0 0 2 HNRNPD POSTAR2 GSE52971,GSM1279667 chr10:60580120-60580200
64251 chr12 58114267 58114267 1 + C T UCEC 58114286 + 58114266 58114306 41 ACGAGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAG ATGAGAAACCTCAAGGAGATCTTCTTCAATATCTTGGTAAG < 41bp 1 0.329730292759288 1 0.0513812005519867 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58114286 chr12:58114267 nonsynonymous SNV 0.868 4 2 hm5C_associated_SNPs_39532 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr12:58114224-58114281
64251 chr1 32628007 32628007 1 + G A UCEC 32628006 + 32627986 32628026 41 TCTCGCCTACTCTTCAGCAGCGACTCGGACTTGCTGGCAGA TCTCGCCTACTCTTCAGCAGCAACTCGGACTTGCTGGCAGA < 41bp 1 0.252299344619857 1 0.0755244195461273 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32628006 chr1:32628007 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_39533 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:32627969-32628039
64251 chr6 32945654 32945654 1 + G T UCEC 32945671 + 32945651 32945691 41 GAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA GAGTAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGA < 41bp 1 0.444459356358452 1 0.59812718629837 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32945671 chr6:32945654 stopgain 0.999 1 4 hm5C_associated_SNPs_39534 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:32945531-32945692
64251 chr11 65269973 65269973 1 + T G UCEC 65269963 + 65269943 65269983 41 AAACAAGATGTTAAGGTATGCTTCAAAAATTTTGTAAATTG AAACAAGATGTTAAGGTATGCTTCAAAAATGTTGTAAATTG < 41bp 1 0.256600898482403 1 0.240130007266998 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269963 chr11:65269973 . . 0 31 hm5C_associated_SNPs_39535 0 0 71 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65269960-65270060
64251 chrX 24073098 24073098 1 + G T UCEC 24073094 + 24073074 24073114 41 TCTTTTGGCAACATGGCGGGCGGAGAAGCTGGAGTGACTCT TCTTTTGGCAACATGGCGGGCGGATAAGCTGGAGTGACTCT < 41bp 1 0.459091856506104 1 0.362345695495605 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24073094 chrX:24073098 stopgain 0.191 1 25 hm5C_associated_SNPs_39536 0 0 24 SRSF1 POSTAR2 GSE83923,GSM2221667 chrX:24073080-24073100
64251 chr3 101445472 101445472 1 + G A UCEC 101445461 + 101445441 101445481 41 CAGTGGTCAATTGGTCAGGACAGGGACTACAGAAATTAGGT CAGTGGTCAATTGGTCAGGACAGGGACTACAAAAATTAGGT < 41bp 1 0.383446785655672 1 0.439141929149628 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP97 ENSG00000182504 CDS Human protein_coding chr3:101445461 chr3:101445472 synonymous SNV . 0 32 hm5C_associated_SNPs_39537 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:101445441-101445474
64251 chr2 184023066 184023066 1 + G A UCEC 184023063 + 184023043 184023083 41 TTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAG TTATCAATCTAAACTGCAGGCTCAGAAAGCCTTAAGCAAAG < 41bp 1 0.470724402200907 1 0.15846574306488 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP35 ENSG00000163002 CDS Human protein_coding chr2:184023063 chr2:184023066 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_39538 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:184023036-184023066
64251 chr14 50789382 50789382 1 + T C UCEC 50789391 + 50789371 50789411 41 AAATACAAGATTCAGGCGATCGACGCCACCGACTCTTGTAT AAATACAAGATCCAGGCGATCGACGCCACCGACTCTTGTAT < 41bp 1 0.664384885212911 1 0.547669291496277 experiment 0.671230229574179 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789391 chr14:50789382 synonymous SNV . 0 12 hm5C_associated_SNPs_39539 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:50789357-50789389
64251 chr14 50789382 50789382 1 + T C UCEC 50789396 + 50789376 50789416 41 CAAGATTCAGGCGATCGACGCCACCGACTCTTGTATCATGA CAAGATCCAGGCGATCGACGCCACCGACTCTTGTATCATGA < 41bp 1 0.0928311689650026 1 0.128198176622391 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP5S ENSG00000125375 CDS Human protein_coding chr14:50789396 chr14:50789382 synonymous SNV . 0 7 hm5C_associated_SNPs_39540 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:50789357-50789389
64251 chr20 25397763 25397763 1 + G A UCEC 25397762 + 25397742 25397782 41 ATGAAGCAAAGTCAGGTGGACGAAGTGATTTGATACCAACT ATGAAGCAAAGTCAGGTGGACAAAGTGATTTGATACCAACT < 41bp 1 0.266699027501813 1 0.526736557483673 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GINS1 ENSG00000101003 CDS Human protein_coding chr20:25397762 chr20:25397763 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_39541 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:25397745-25397778
64251 chr14 56079160 56079160 1 + G T UCEC 56079153 + 56079133 56079173 41 CCTGTGCTTGAAGAGCAGGTCATCAAAGAAAGTGACGCATC CCTGTGCTTGAAGAGCAGGTCATCAAATAAAGTGACGCATC < 41bp 1 0.564531711452478 1 0.0811395645141602 experiment 0.870936577095043 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56079153 chr14:56079160 stopgain 0.997 1 28 hm5C_associated_SNPs_39542 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221663 chr14:56079140-56079160
64251 chr5 56545306 56545306 1 + G A UCEC 56545303 + 56545283 56545323 41 GCCTCGTCTAACCAAACTGACACGAATGCGCACTGATAAGA GCCTCGTCTAACCAAACTGACACAAATGCGCACTGATAAGA < 41bp 1 0.688210039072208 1 0.138661891222 experiment 0.623579921855584 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56545303 chr5:56545306 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_39543 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr5:56545278-56545325
64251 chr3 8607253 8607253 1 + T G UCEC 8607252 + 8607232 8607272 41 GAGCCGCTGGTGGACCTCATCTACTTCTGGAAGGATGGTGC GAGCCGCTGGTGGACCTCATCGACTTCTGGAAGGATGGTGC < 41bp 1 0.658162253641933 1 0.775054335594177 experiment 0.683675492716135 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LMCD1 ENSG00000071282 CDS Human protein_coding chr3:8607252 chr3:8607253 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_39544 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:8607253-8607254
64251 chr1 218504395 218504395 1 + G T UCEC 218504390 + 218504370 218504410 41 GGACAAGGAAAGTGATGGGCCAGATGACAGCAGACCAGAAT GGACAAGGAAAGTGATGGGCCAGATTACAGCAGACCAGAAT < 41bp 1 0.383305153435163 1 0.400295257568359 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RRP15 ENSG00000067533 CDS Human protein_coding chr1:218504390 chr1:218504395 nonsynonymous SNV 0.001 1 26 hm5C_associated_SNPs_39546 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:218504331-218504465
64251 chr12 52370282 52370282 1 + C A UCEC 52370279 + 52370259 52370299 41 GAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCT GAGACTGGACATGGAAGATCCCTAATGTGAGATGTGTCTCT < 41bp 1 0.18544727666852 1 0.425498127937317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52370279 chr12:52370282 stopgain 0.993 1 24 hm5C_associated_SNPs_39548 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:52370258-52370282
64251 chr11 34167654 34167654 1 + C T UCEC 34167634 + 34167614 34167654 41 TTTTGATTTTTCTCTAGTGACAAGAAAAGGAAGTTAGAGGC TTTTGATTTTTCTCTAGTGACAAGAAAAGGAAGTTAGAGGT < 41bp 1 0.63126433982535 1 0.324666738510132 experiment 0.7374713203493 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34167634 chr11:34167654 nonsynonymous SNV 0.659 0 41 hm5C_associated_SNPs_39549 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:34167645-34167673
64251 chr2 128861533 128861533 1 + G T UCEC 128861524 + 128861504 128861544 41 AGTGAGTTTTTAGCAGAAGACAGTCAAGAGAAATTTTGGAA AGTGAGTTTTTAGCAGAAGACAGTCAAGATAAATTTTGGAA < 41bp 1 0.0642238554336519 1 0.164056748151779 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128861524 chr2:128861533 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_39551 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:128861517-128861560
64251 chr7 150707877 150707877 1 + C T UCEC 150707858 + 150707838 150707878 41 AGCACCCACCCAGGAGAGATCCACCTCACTGTAGCTGTGCT AGCACCCACCCAGGAGAGATCCACCTCACTGTAGCTGTGTT < 41bp 1 0.0724817516788471 1 0.159210354089737 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOS3 ENSG00000164867 CDS Human protein_coding chr7:150707858 chr7:150707877 synonymous SNV . 0 40 hm5C_associated_SNPs_39552 0 0 1 RPS3 POSTAR2 ENCODE chr7:150707858-150707896
64251 chr1 183101655 183101655 1 + T G UCEC 183101642 + 183101622 183101662 41 ACTGGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGC ACTGGCAGGAGAAAATCAAACAGCATTTGAGATGGAAGAGC < 41bp 1 0.710918116148077 1 0.433112323284149 experiment 0.578163767703845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101642 chr1:183101655 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_39553 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183101638-183101668
64251 chr1 183101655 183101655 1 + T G UCEC 183101645 + 183101625 183101665 41 GGCAGGAGAAAATCAAACAGCATTTGAGATTGAAGAGCTTA GGCAGGAGAAAATCAAACAGCATTTGAGATGGAAGAGCTTA < 41bp 1 0.0284555610755198 1 0.0967668890953064 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101645 chr1:183101655 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_39554 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183101638-183101668
64251 chr2 74682725 74682725 1 + G A UCEC 74682720 + 74682700 74682740 41 GGGGGACAAGTCCTGGGGACCAAGAGGTGAGGCCAAGAGGG GGGGGACAAGTCCTGGGGACCAAGAAGTGAGGCCAAGAGGG < 41bp 1 0.709107247914322 1 0.836267232894897 experiment 0.581785504171356 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INO80B ENSG00000115274 CDS Human protein_coding chr2:74682720 chr2:74682725 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_39555 0 0 3 DDX24 POSTAR2 ENCODE chr2:74682686-74682725
64251 chr11 65267028 65267028 1 + C A UCEC 65267046 + 65267026 65267066 41 GTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACG GTAATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACG < 41bp 1 0.376569264416826 1 0.224397897720337 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267046 chr11:65267028 . . 0 3 hm5C_associated_SNPs_39558 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chr11 65267028 65267028 1 + C A UCEC 65267048 + 65267028 65267068 41 CATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAA AATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAA < 41bp 1 0.0945406408295234 1 0.173979431390762 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267048 chr11:65267028 . . 0 1 hm5C_associated_SNPs_39559 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65267020-65267080
64251 chr1 32622987 32622987 1 + C A UCEC 32623004 + 32622984 32623024 41 TTTCTGATGATTCTGACCTGCAGTTAGCAACCACACAGAAA TTTATGATGATTCTGACCTGCAGTTAGCAACCACACAGAAA < 41bp 1 0.137571587307697 1 0.110078901052475 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32623004 chr1:32622987 nonsynonymous SNV 0.787 4 4 hm5C_associated_SNPs_39561 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:32622954-32622991
64251 chr8 145662242 145662242 1 - G A UCEC 145662226 - 145662206 145662246 41 GCTGCGAAGGCATCACCCCCCTCCACGATGCCCTCAACTGT GCTGTGAAGGCATCACCCCCCTCCACGATGCCCTCAACTGT < 41bp 1 0.602747500824294 1 0.922515511512756 experiment 0.794504998351412 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TONSL ENSG00000160949 CDS Human protein_coding chr8:145662226 chr8:145662242 synonymous SNV . 0 5 hm5C_associated_SNPs_39562 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:145662240-145662260
64251 chr1 6681588 6681588 1 + A C UCEC 6681570 + 6681550 6681590 41 CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGAAAT CCACACCTGGATTCACCTGTCCTGTGCGAAAATCCGGACAT < 41bp 1 0.236958931890365 1 0.291622877120972 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681570 chr1:6681588 nonsynonymous SNV 0.999 5 39 hm5C_associated_SNPs_39563 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6681559-6681602
64251 chr6 34950943 34950943 1 + C T UCEC 34950926 + 34950906 34950946 41 AAAAGATAACCATGGACTGACTGCCCTAGACACTGTTCGGG AAAAGATAACCATGGACTGACTGCCCTAGACACTGTTTGGG < 41bp 1 0.11507082600149 1 0.197713226079941 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKS1A ENSG00000064999 CDS Human protein_coding chr6:34950926 chr6:34950943 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_39567 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr6:34950934-34950953
64251 chr6 24423247 24423247 1 + G A UCEC 24423252 + 24423232 24423272 41 TGCTTTCATTCCTTGGACGACAGCTAGAAGCTCCATTGCCT TGCTTTCATTCCTTGAACGACAGCTAGAAGCTCCATTGCCT < 41bp 1 0.473370651448612 1 0.0264926552772522 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423252 chr6:24423247 nonsynonymous SNV 0.995 4 16 hm5C_associated_SNPs_39568 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:24423234-24423265
64251 chr1 35879605 35879605 1 + T G UCEC 35879615 + 35879595 35879635 41 TAGATAACATTTTTACTGAGCCCTATTCCAGATTTATGATT TAGATAACATGTTTACTGAGCCCTATTCCAGATTTATGATT < 41bp 1 0.0853929876530477 1 0.0428610742092133 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35879615 chr1:35879605 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_39570 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35879586-35879674
64251 chr1 35879605 35879605 1 + T G UCEC 35879623 + 35879603 35879643 41 ATTTTTACTGAGCCCTATTCCAGATTTATGATTGAACTTAC ATGTTTACTGAGCCCTATTCCAGATTTATGATTGAACTTAC < 41bp 1 0.316934366773672 1 0.717462301254272 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35879623 chr1:35879605 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_39571 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35879586-35879674
64251 chr13 28854640 28854640 1 + C A UCEC 28854635 + 28854615 28854655 41 ATTTTATACTCAATTGGATGCTGCTCAAATGAGAAATGATG ATTTTATACTCAATTGGATGCTGCTAAAATGAGAAATGATG < 41bp 1 0.164094723841975 1 0.151957124471664 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAN3 ENSG00000152520 CDS Human protein_coding chr13:28854635 chr13:28854640 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_39572 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:28854603-28854641
64251 chr4 154197185 154197185 1 + G A UCEC 154197184 + 154197164 154197204 41 ACCTGATGGACGTGCTGCAGCGAACTCCAGGCAGCAACGCT ACCTGATGGACGTGCTGCAGCAAACTCCAGGCAGCAACGCT < 41bp 1 0.212388300495757 1 0.07687047123909 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154197184 chr4:154197185 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_39573 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:154197167-154197193
64251 chr9 19336788 19336788 1 + G T UCEC 19336770 + 19336750 19336790 41 ATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGAT ATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGATAT < 41bp 1 0.048598769475088 1 0.205629169940948 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336770 chr9:19336788 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_39574 0 0 1 QKI POSTAR2 ENCODE chr9:19336751-19336813
64251 chr5 156816265 156816265 1 + C T UCEC 156816259 + 156816239 156816279 41 CGGCTGTGCTGTGGCCTGTCCATGTTCGAGGTCATCCTGAC CGGCTGTGCTGTGGCCTGTCCATGTTTGAGGTCATCCTGAC < 41bp 1 0.372786331647843 1 0.560127198696136 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816259 chr5:156816265 synonymous SNV . 0 27 hm5C_associated_SNPs_39576 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr9 96026309 96026309 1 + G A UCEC 96026292 + 96026272 96026312 41 TCGACTTGGACGGGGACGCACCCGATGAAATTGCCACGTAT TCGACTTGGACGGGGACGCACCCGATGAAATTGCCACATAT < 41bp 1 0.472734634573604 1 0.454972565174103 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96026292 chr9:96026309 synonymous SNV . 0 38 hm5C_associated_SNPs_39578 0 0 2 PRPF8 POSTAR2 ENCODE chr9:96026284-96026360
64251 chrX 48759707 48759707 1 + G A UCEC 48759703 + 48759683 48759723 41 GACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGA GACAGGGAACGGGATCGGGACCGCAGGTATGACAAGGCAGA < 41bp 1 0.588354568054834 1 0.0586557388305664 experiment 0.823290863890332 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759703 chrX:48759707 nonsynonymous SNV 0.573 3 25 hm5C_associated_SNPs_39579 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chrX 48759707 48759707 1 + G A UCEC 48759704 + 48759684 48759724 41 ACAGGGAACGGGATCGGGACCGCGGGTATGACAAGGCAGAC ACAGGGAACGGGATCGGGACCGCAGGTATGACAAGGCAGAC < 41bp 1 0.787589721104631 1 0.22902974486351 experiment 0.424820557790738 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759704 chrX:48759707 nonsynonymous SNV 0.573 3 24 hm5C_associated_SNPs_39580 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chrX 48759707 48759707 1 + G A UCEC 48759720 + 48759700 48759740 41 GGACCGCGGGTATGACAAGGCAGACCGGGAAGAGGGCAAAG GGACCGCAGGTATGACAAGGCAGACCGGGAAGAGGGCAAAG < 41bp 1 0.571647701641416 1 0.170189052820206 experiment 0.856704596717167 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759720 chrX:48759707 nonsynonymous SNV 0.573 3 8 hm5C_associated_SNPs_39581 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr18 74620345 74620345 1 + G A UCEC 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATAGATGACAGCACTGTAGACCAACAGAGCATGC < 41bp 1 0.483078349196805 1 0.187785714864731 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620345 synonymous SNV . 0 31 hm5C_associated_SNPs_39582 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:74620322-74620347
64251 chr17 37822258 37822258 1 + G A UCEC 37822248 + 37822228 37822268 41 GGTGGCCAGTGTGTGGACCGCCAGGAGGTGGCTGAGATCAC GGTGGCCAGTGTGTGGACCGCCAGGAGGTGACTGAGATCAC < 41bp 1 0.675532475730101 1 0.624145746231079 experiment 0.648935048539799 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCAP ENSG00000173991 CDS Human protein_coding chr17:37822248 chr17:37822258 nonsynonymous SNV 0.998 1 31 hm5C_associated_SNPs_39583 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37822240-37822261
64251 chr6 151671609 151671609 1 + G T UCEC 151671614 + 151671594 151671634 41 AAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGG AAAAGAGCAAGGAGATGGTCCTCTTCTGATGAGGAAGGGGG < 41bp 1 0.0404525620275143 1 0.0907747745513916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671614 chr6:151671609 nonsynonymous SNV 0.639 2 16 hm5C_associated_SNPs_39584 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:151671600-151671620
64251 chr6 125550325 125550325 1 + A G UCEC 125550344 + 125550324 125550364 41 GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT GGGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT < 41bp 1 0.262459614550095 1 0.090606302022934 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125550344 chr6:125550325 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_39585 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:125550291-125550329
64251 chr12 57569349 57569349 1 + C T UCEC 57569364 + 57569344 57569384 41 GACAACCACACCTGCCAGATCCAGAGCTACTGTGCCAAGCA GACAATCACACCTGCCAGATCCAGAGCTACTGTGCCAAGCA < 41bp 1 0.197784138829729 1 0.739909172058105 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57569364 chr12:57569349 synonymous SNV . 0 6 hm5C_associated_SNPs_39586 0 0 2 RPS3 POSTAR2 ENCODE chr12:57569298-57569371
64251 chrX 73046747 73046747 1 - A G UCEC 73046754 - 73046734 73046774 41 GTTGGATGGAAGTCTCAAGGCTTGAGTTAGAAGTCTTAAGA GTTGGATGGAAGTCTCAAGGCTTGAGTCAGAAGTCTTAAGA < 41bp 1 0.567936564499194 1 0.128127545118332 experiment 0.864126871001613 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046754 chrX:73046747 . . 0 28 hm5C_associated_SNPs_39587 0 0 80 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 153008772 153008772 1 + C T UCEC 153008774 + 153008754 153008794 41 GACGCGGGCATTGCCCTGCTCTCCATCACCCACCGGCCCTC GACGCGGGCATTGCCCTGTTCTCCATCACCCACCGGCCCTC < 41bp 1 0.782897595105115 1 0.95909595489502 experiment 0.43420480978977 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153008774 chrX:153008772 nonsynonymous SNV 0.963 4 19 hm5C_associated_SNPs_39588 0 0 1 PPIG POSTAR2 ENCODE chrX:153008737-153008778
64251 chr17 33310226 33310226 1 + G A UCEC 33310210 + 33310190 33310230 41 GTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCAC GTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTACCAC < 41bp 1 0.038101802184204 1 0.132887452840805 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310210 chr17:33310226 nonsynonymous SNV 0.998 0 37 hm5C_associated_SNPs_39589 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33310216-33310254
64251 chr13 61034620 61034620 1 + C T UCEC 61034613 + 61034593 61034633 41 CACCAAGGATGCTGCGATTACAGATGACTGATGGTCATATA CACCAAGGATGCTGCGATTACAGATGATTGATGGTCATATA < 41bp 1 0.679475406367147 1 0.746725261211395 experiment 0.641049187265706 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034613 chr13:61034620 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_39590 0 0 1 BUD13 POSTAR2 ENCODE chr13:61034561-61034638
64251 chr19 36128122 36128122 1 + G A UCEC 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT ACCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT < 41bp 1 0.173881307888589 1 0.47196552157402 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128122 nonsynonymous SNV 0.997 1 1 hm5C_associated_SNPs_39591 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36128060-36128131
64251 chr2 89028800 89028800 1 + G A UCEC 89028799 + 89028779 89028819 41 TTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCCTGCAGTAT TTCCCTGTCCTCCGCAGGCCCACCAGCTCATCCTGCAGTAT < 41bp 1 0.729414196958037 1 0.104578226804733 experiment 0.541171606083926 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPIA ENSG00000153574 CDS Human protein_coding chr2:89028799 chr2:89028800 nonsynonymous SNV 0.812 2 22 hm5C_associated_SNPs_39593 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:89028800-89028820
64251 chr1 171535877 171535877 1 + C T UCEC 171535864 + 171535844 171535884 41 ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACAGATC ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGTACAGATC < 41bp 1 0.444903343695791 1 0.503023624420166 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171535864 chr1:171535877 synonymous SNV . 0 34 hm5C_associated_SNPs_39594 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171535819-171535894
64251 chr19 45493777 45493777 1 + C T UCEC 45493765 + 45493745 45493785 41 TACATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAG TACATCCTGGACAACGAGACCAACTTCGTGGTTCAGGTCAG < 41bp 1 0.357298014438246 1 0.0869581401348114 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493765 chr19:45493777 synonymous SNV . 0 33 hm5C_associated_SNPs_39595 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:45493760-45493780
64251 chr10 93768929 93768929 1 + C T UCEC 93768927 + 93768907 93768947 41 TGCTCTAGAGAATATCTCAACCCGTTGCATTACACTGGACC TGCTCTAGAGAATATCTCAACCTGTTGCATTACACTGGACC < 41bp 1 0.070428598345277 1 0.0910655856132507 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93768927 chr10:93768929 nonsynonymous SNV 0.950 5 23 hm5C_associated_SNPs_39596 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:93768902-93768934
64251 chr17 43220897 43220897 1 + G A UCEC 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCATCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.404713514765061 1 0.801491856575012 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220897 nonsynonymous SNV 0.992 0 6 hm5C_associated_SNPs_39597 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr7 77214872 77214872 1 + G A UCEC 77214877 + 77214857 77214897 41 TAGATCATTGTAATGGCCTGCCGAGAATTTGAGATGGGAAG TAGATCATTGTAATGACCTGCCGAGAATTTGAGATGGGAAG < 41bp 1 0.11512021515674 1 0.703410983085632 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77214877 chr7:77214872 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_39598 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77214858-77214896
64251 chr7 77214872 77214872 1 + G A UCEC 77214878 + 77214858 77214898 41 AGATCATTGTAATGGCCTGCCGAGAATTTGAGATGGGAAGG AGATCATTGTAATGACCTGCCGAGAATTTGAGATGGGAAGG < 41bp 1 0.791870860121156 1 0.766907930374146 experiment 0.416258279757688 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77214878 chr7:77214872 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_39599 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77214858-77214896
64251 chr19 14561827 14561827 1 + C T UCEC 14561839 + 14561819 14561859 41 GAAGAGCTCGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG GAAGAGCTTGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG < 41bp 1 0.652946103420397 1 0.418331801891327 experiment 0.694107793159205 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561839 chr19:14561827 synonymous SNV . 0 9 hm5C_associated_SNPs_39602 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:14561820-14561840
64251 chr17 77755539 77755539 1 + C T UCEC 77755519 + 77755499 77755539 41 CATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCC CATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCT < 41bp 1 0.657601539501355 1 0.417564511299133 experiment 0.68479692099729 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755519 chr17:77755539 nonsynonymous SNV 0.852 4 41 hm5C_associated_SNPs_39603 0 0 4 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr17 77755539 77755539 1 + C T UCEC 77755547 + 77755527 77755567 41 GAGGCAAGAGGCCGAGAGGCCGGCCAAGGAAGCTCACTGCC GAGGCAAGAGGCTGAGAGGCCGGCCAAGGAAGCTCACTGCC < 41bp 1 0.42353528099482 1 0.240433722734451 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755547 chr17:77755539 nonsynonymous SNV 0.852 4 13 hm5C_associated_SNPs_39604 0 0 4 BUD13 POSTAR2 ENCODE chr17:77755475-77755591
64251 chr7 2473363 2473363 1 + C T UCEC 2473368 + 2473348 2473388 41 GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA GGACCGGCAGCTCCGTTTCCCCCCGAGCTACCGGAACAGGA < 41bp 1 0.353907262776353 1 0.13817971944809 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473368 chr7:2473363 synonymous SNV . 0 16 hm5C_associated_SNPs_39608 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chr11 610284 610284 1 + C T UCEC 610293 + 610273 610313 41 CAGGTGTTCTCCGAGCTGCCCTTTCCCAGTCACGTGCTTCC CAGGTGTTCTCTGAGCTGCCCTTTCCCAGTCACGTGCTTCC < 41bp 1 0.0226503444029708 1 0.0263752639293671 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610293 chr11:610284 synonymous SNV . 0 12 hm5C_associated_SNPs_39609 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:610260-610289
64251 chr9 137021680 137021680 1 + C T UCEC 137021694 + 137021674 137021714 41 TTCAGACGAAAGAGATTGTACAGAAACTACAAGGCCACACA TTCAGATGAAAGAGATTGTACAGAAACTACAAGGCCACACA < 41bp 1 0.635395205534742 1 0.461909085512161 experiment 0.729209588930516 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR5 ENSG00000196363 CDS Human protein_coding chr9:137021694 chr9:137021680 nonsynonymous SNV 0.951 4 7 hm5C_associated_SNPs_39610 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:137021646-137021708
64251 chr19 1037833 1037833 1 + C T UCEC 1037820 + 1037800 1037840 41 CACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCC CACAGTGGCCGATGGGGCTCCCTCGGGCACCGGTGACTGCC < 41bp 1 0.193141828215756 1 0.179466247558594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037820 chr19:1037833 synonymous SNV . 0 34 hm5C_associated_SNPs_39611 0 0 1 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037833 1037833 1 + C T UCEC 1037841 + 1037821 1037861 41 CTCGGGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTG CTCGGGCACCGGTGACTGCCCGGACCCGGGGGAGGTCCCTG < 41bp 1 0.677639744064196 1 0.712559521198273 experiment 0.644720511871609 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037841 chr19:1037833 synonymous SNV . 0 13 hm5C_associated_SNPs_39612 0 0 1 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037833 1037833 1 + C T UCEC 1037845 + 1037825 1037865 41 GGCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATA GGCACCGGTGACTGCCCGGACCCGGGGGAGGTCCCTGAATA < 41bp 1 0.661488543589954 1 0.856936454772949 experiment 0.677022912820092 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037845 chr19:1037833 synonymous SNV . 0 9 hm5C_associated_SNPs_39613 0 0 1 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr19 1037833 1037833 1 + C T UCEC 1037846 + 1037826 1037866 41 GCACCGGCGACTGCCCGGACCCGGGGGAGGTCCCTGAATAT GCACCGGTGACTGCCCGGACCCGGGGGAGGTCCCTGAATAT < 41bp 1 0.689313799364491 1 0.847740292549133 experiment 0.621372401271018 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037846 chr19:1037833 synonymous SNV . 0 8 hm5C_associated_SNPs_39614 0 0 1 LARP4 POSTAR2 ENCODE chr19:1037800-1037841
64251 chr1 32622991 32622991 1 + T C UCEC 32623004 + 32622984 32623024 41 TTTCTGATGATTCTGACCTGCAGTTAGCAACCACACAGAAA TTTCTGACGATTCTGACCTGCAGTTAGCAACCACACAGAAA < 41bp 1 0.12849483976853 1 0.114109456539154 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32623004 chr1:32622991 synonymous SNV . 0 8 hm5C_associated_SNPs_39615 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:32622954-32622991
64251 chr19 18053554 18053554 1 + C T UCEC 18053574 + 18053554 18053594 41 CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC TGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC < 41bp 1 0.383120927226189 1 0.0806451439857483 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053574 chr19:18053554 synonymous SNV . 0 1 hm5C_associated_SNPs_39616 0 0 7 GRWD1 POSTAR2 ENCODE chr19:18053478-18053585
64251 chr16 457490 457490 1 + G A UCEC 457472 + 457452 457492 41 GGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCGCC GGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGAGCACC < 41bp 1 0.787376545043375 1 0.949205636978149 experiment 0.425246909913251 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout DECR2 ENSG00000242612 CDS Human protein_coding chr16:457472 chr16:457490 synonymous SNV . 0 39 hm5C_associated_SNPs_39617 0 0 4 GRWD1 POSTAR2 ENCODE chr16:457472-457565
64251 chr4 144460028 144460028 1 + G A UCEC 144460033 + 144460013 144460053 41 TGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATG TGGCATCAATCTTGCAACTGCTGATGTAGTAATTTTGTATG < 41bp 1 0.277972665535193 1 0.157326400279999 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144460033 chr4:144460028 synonymous SNV . 0 16 hm5C_associated_SNPs_39618 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr4:144459994-144460038
64251 chr1 44436769 44436769 1 + T C UCEC 44436760 + 44436740 44436780 41 CTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG CTTCGTGCTTCGTCAACGTTCTGTGGCCTCGGAGCTCTGTG < 41bp 1 0.49296653424386 1 0.186415910720825 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436760 chr1:44436769 nonsynonymous SNV 0.778 2 30 hm5C_associated_SNPs_39619 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44436739-44436777
64251 chr3 49568291 49568291 1 + C T UCEC 49568306 + 49568286 49568326 41 CCACACCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG CCACATCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG < 41bp 1 0.208463671085644 1 0.284194052219391 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568306 chr3:49568291 nonsynonymous SNV 0.074 1 6 hm5C_associated_SNPs_39620 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:49568256-49568311
64251 chr12 110778665 110778665 1 + C T UCEC 110778654 + 110778634 110778674 41 TGAGGACGTGACGTCAAAAGCTTTCACAGGCCGGGAGTTTG TGAGGACGTGACGTCAAAAGCTTTCACAGGCTGGGAGTTTG < 41bp 1 0.0904499165292375 1 0.0447016060352325 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110778654 chr12:110778665 nonsynonymous SNV 0.989 5 32 hm5C_associated_SNPs_39621 0 0 15 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:110778660-110778680
64251 chr17 4856575 4856575 1 + C T UCEC 4856570 + 4856550 4856590 41 CAAACTCACCCTTCCAGAAACTAAGCGTTGTGGATCAAGAA CAAACTCACCCTTCCAGAAACTAAGTGTTGTGGATCAAGAA < 41bp 1 0.204493093070348 1 0.183000952005386 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4856570 chr17:4856575 synonymous SNV . 0 26 hm5C_associated_SNPs_39622 1 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4856571-4856598
64251 chr19 7620175 7620175 1 + G A UCEC 7620161 + 7620141 7620181 41 CTCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGCACAG CTCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCAGCACAG < 41bp 1 0.618410100672495 1 0.910398483276367 experiment 0.763179798655009 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620161 chr19:7620175 nonsynonymous SNV 0.992 0 35 hm5C_associated_SNPs_39624 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7620154-7620178
64251 chr19 49611691 49611691 1 + G A UCEC 49611707 + 49611687 49611727 41 CTGCGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGT CTGCACCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGT < 41bp 1 0.161500199574148 1 0.0295677781105042 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611707 chr19:49611691 synonymous SNV . 0 5 hm5C_associated_SNPs_39625 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr19 49611691 49611691 1 + G A UCEC 49611710 + 49611690 49611730 41 CGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGTTTG CACCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGTTTG < 41bp 1 0.0488851697962974 1 0.0279361009597778 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611710 chr19:49611691 synonymous SNV . 0 2 hm5C_associated_SNPs_39626 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr14 23070610 23070610 1 + G A UCEC 23070600 + 23070580 23070620 41 GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCC GCTGGCTGAGTAGCTGGCTGCCCACGTGGCACCCCACTTCC < 41bp 1 0.333307773552552 1 0.166586220264435 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070600 chr14:23070610 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_39627 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chr8 107752698 107752698 1 + T C UCEC 107752684 + 107752664 107752704 41 CGAACAATGACAGGTTTAGACACCCCAGTGCTGATGGTGAT CGAACAATGACAGGTTTAGACACCCCAGTGCTGACGGTGAT < 41bp 1 0.365537293719194 1 0.115660101175308 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXR1 ENSG00000164830 CDS Human protein_coding chr8:107752684 chr8:107752698 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_39628 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr8:107752680-107752702
64251 chr17 46128928 46128928 1 + G A UCEC 46128909 + 46128889 46128929 41 GACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGG GACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCAG < 41bp 1 0.774855109602905 1 0.734620213508606 experiment 0.450289780794189 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128909 chr17:46128928 nonsynonymous SNV 0.998 0 40 hm5C_associated_SNPs_39629 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:46128907-46128945
64251 chr17 46128928 46128928 1 + G A UCEC 46128914 + 46128894 46128934 41 CGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAG CGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCAGTGAAG < 41bp 1 0.624889987863445 1 0.840571999549866 experiment 0.750220024273111 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128914 chr17:46128928 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_39630 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:46128907-46128945
64251 chr17 46128928 46128928 1 + G A UCEC 46128919 + 46128899 46128939 41 TGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTG TGCGAGAAAGCGAAACGGAGCAGGGATTCAGTGAAGATTTG < 41bp 1 0.672398569178623 1 0.643336415290833 experiment 0.655202861642755 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128919 chr17:46128928 nonsynonymous SNV 0.998 0 30 hm5C_associated_SNPs_39631 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:46128907-46128945
64251 chr17 46128928 46128928 1 + G A UCEC 46128927 + 46128907 46128947 41 AGCGAAACGGAGCAGGGATTCGGTGAAGATTTGGAGGATTT AGCGAAACGGAGCAGGGATTCAGTGAAGATTTGGAGGATTT < 41bp 1 0.563575551276599 1 0.430111169815063 experiment 0.872848897446801 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128927 chr17:46128928 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_39632 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:46128907-46128945
64251 chr6 142519615 142519615 1 + C T UCEC 142519603 + 142519583 142519623 41 AGAAAATGAAGATGCTGGAGCAGCCTCTCTGCCCACTCAGC AGAAAATGAAGATGCTGGAGCAGCCTCTCTGCTCACTCAGC < 41bp 1 0.31438383629903 1 0.317446649074554 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519603 chr6:142519615 nonsynonymous SNV 1.000 0 33 hm5C_associated_SNPs_39635 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:142519590-142519617
64251 chr5 72185767 72185767 1 + C T UCEC 72185770 + 72185750 72185790 41 TAGCAGATTCAGTAGGACATCATTTAAACAAACCAGTAAGT TAGCAGATTCAGTAGGATATCATTTAAACAAACCAGTAAGT < 41bp 1 0.106595795421514 1 0.124539881944656 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185770 chr5:72185767 nonsynonymous SNV 0.999 2 18 hm5C_associated_SNPs_39638 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185711-72185777
64251 chr5 72185767 72185767 1 + C T UCEC 72185778 + 72185758 72185798 41 TCAGTAGGACATCATTTAAACAAACCAGTAAGTATCTGTTA TCAGTAGGATATCATTTAAACAAACCAGTAAGTATCTGTTA < 41bp 1 0.200611658858674 1 0.0978406965732574 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185778 chr5:72185767 nonsynonymous SNV 0.999 2 10 hm5C_associated_SNPs_39639 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185711-72185777
64251 chr5 72185767 72185767 1 + C T UCEC 72185782 + 72185762 72185802 41 TAGGACATCATTTAAACAAACCAGTAAGTATCTGTTAAGAA TAGGATATCATTTAAACAAACCAGTAAGTATCTGTTAAGAA < 41bp 1 0.15243616568662 1 0.116260200738907 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185782 chr5:72185767 nonsynonymous SNV 0.999 2 6 hm5C_associated_SNPs_39640 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185711-72185777
64251 chr5 72185767 72185767 1 + C T UCEC 72185783 + 72185763 72185803 41 AGGACATCATTTAAACAAACCAGTAAGTATCTGTTAAGAAC AGGATATCATTTAAACAAACCAGTAAGTATCTGTTAAGAAC < 41bp 1 0.321012528069325 1 0.124424010515213 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72185783 chr5:72185767 nonsynonymous SNV 0.999 2 5 hm5C_associated_SNPs_39641 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72185711-72185777
64251 chr12 123102909 123102909 1 + C T UCEC 123102893 + 123102873 123102913 41 TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAAGCGTGG TGGACTTGTTTTCACAGGTTCCCTACTTCAGCAAAGTGTGG < 41bp 1 0.0572351845497601 1 0.032362312078476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123102893 chr12:123102909 nonsynonymous SNV 0.971 1 37 hm5C_associated_SNPs_39643 0 0 4 DDX24 POSTAR2 ENCODE chr12:123102889-123102930
64251 chrX 150565804 150565804 1 + G A UCEC 150565821 + 150565801 150565841 41 GGCGCTGAACGCACTGCAGCCTCCTGAGTTCAGGTAGCCCT GGCACTGAACGCACTGCAGCCTCCTGAGTTCAGGTAGCCCT < 41bp 1 0.774632675219212 1 0.345600485801697 experiment 0.450734649561577 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VMA21 ENSG00000160131 CDS Human protein_coding chrX:150565821 chrX:150565804 synonymous SNV . 0 4 hm5C_associated_SNPs_39644 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:150565764-150565807
64251 chr13 113907464 113907464 1 + G A UCEC 113907465 + 113907445 113907485 41 GTGGTCGAAAACTTCAGTGGCAAACTACTTTGGGACATGCT GTGGTCGAAAACTTCAGTGACAAACTACTTTGGGACATGCT < 41bp 1 0.0732695254395524 1 0.140187948942184 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CUL4A ENSG00000139842 CDS Human protein_coding chr13:113907465 chr13:113907464 stopgain 0.374 1 20 hm5C_associated_SNPs_39646 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113907453-113907491
64251 chr16 48395721 48395721 1 - C T UCEC 48395730 - 48395710 48395750 41 AAAAATACGATGGTCACCAGCAGTTCTTCGCAATCGTACAG AAAAATACGATGGTCACCAGCAGTTCTTCACAATCGTACAG < 41bp 1 0.229126993330232 1 0.45125088095665 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIAH1 ENSG00000102910;ENSG00000196470 CDS Human other chr16:48395730 chr16:48395721 nonsynonymous SNV 0.996 2 30 hm5C_associated_SNPs_39648 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:48395686-48395723
64251 chr16 29848067 29848067 1 + C T UCEC 29848064 + 29848044 29848084 41 CAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGGGACTTC CAGCCCTGCACCTCCGGGCTCGGTGGAACTTCCGGGACTTC < 41bp 1 0.491880474565016 1 0.47686979174614 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MVP ENSG00000013364 CDS Human protein_coding chr16:29848064 chr16:29848067 nonsynonymous SNV 0.669 2 24 hm5C_associated_SNPs_39654 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chr11 581556 581556 1 + G A UCEC 581546 + 581526 581566 41 GCCTGGATGAGCTTGTGGCCCGGAGCCCAGGGCCGGATGGA GCCTGGATGAGCTTGTGGCCCGGAGCCCAGAGCCGGATGGA < 41bp 1 0.636422801861968 1 0.80035799741745 experiment 0.727154396276063 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:581546 chr11:581556 nonsynonymous SNV 0.029 3 31 hm5C_associated_SNPs_39656 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:581511-581566
64251 chr11 581556 581556 1 + G A UCEC 581558 + 581538 581578 41 TTGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTC TTGTGGCCCGGAGCCCAGAGCCGGATGGACACCCACAGGTC < 41bp 1 0.707724514545637 1 0.864603757858276 experiment 0.584550970908726 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:581558 chr11:581556 nonsynonymous SNV 0.029 3 19 hm5C_associated_SNPs_39657 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:581511-581566
64251 chr11 581556 581556 1 + G A UCEC 581559 + 581539 581579 41 TGTGGCCCGGAGCCCAGGGCCGGATGGACACCCACAGGTCG TGTGGCCCGGAGCCCAGAGCCGGATGGACACCCACAGGTCG < 41bp 1 0.527889902610384 1 0.891148328781128 experiment 0.944220194779231 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:581559 chr11:581556 nonsynonymous SNV 0.029 3 18 hm5C_associated_SNPs_39658 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:581511-581566
64251 chr2 64112923 64112923 1 + T C UCEC 64112920 + 64112900 64112940 41 CATAGATAATCTGGGTGCCACAGTGGATCTGTATATTCTTA CATAGATAATCTGGGTGCCACAGCGGATCTGTATATTCTTA < 41bp 1 0.614893299613007 1 0.511567294597626 experiment 0.770213400773986 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UGP2 ENSG00000169764 CDS Human protein_coding chr2:64112920 chr2:64112923 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_39660 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:64112886-64112926
64251 chr9 131010984 131010984 1 + C T UCEC 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACTGTGAGGGACCTCATGCCCAAGACCATCATG < 41bp 1 0.403840012788068 1 0.0765591859817505 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131010984 synonymous SNV . 0 11 hm5C_associated_SNPs_39661 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr12 123466273 123466273 1 + A C UCEC 123466278 + 123466258 123466298 41 CGGAAGAAGCGGGGGAAGTACAAGGACAAGAGGAGGAAGAA CGGAAGAAGCGGGGGCAGTACAAGGACAAGAGGAGGAAGAA < 41bp 1 0.798381821219978 1 0.738885164260864 experiment 0.403236357560043 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123466278 chr12:123466273 nonsynonymous SNV 0.993 3 16 hm5C_associated_SNPs_39662 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:123466260-123466280
64251 chr17 80559265 80559265 1 + G A UCEC 80559263 + 80559243 80559283 41 GCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC GCGCCACAACGGTGACCAGCCGAAGCAGCCGGAGCTGAAGC < 41bp 1 0.615508735640923 1 0.797695159912109 experiment 0.768982528718154 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559263 chr17:80559265 nonsynonymous SNV 0.032 1 23 hm5C_associated_SNPs_39663 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559265 80559265 1 + G A UCEC 80559268 + 80559248 80559288 41 ACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC ACAACGGTGACCAGCCGAAGCAGCCGGAGCTGAAGCGGATC < 41bp 1 0.355829635788969 1 0.584988057613373 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559268 chr17:80559265 nonsynonymous SNV 0.032 1 18 hm5C_associated_SNPs_39664 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559265 80559265 1 + G A UCEC 80559277 + 80559257 80559297 41 ACCAGCCGGAGCAGCCGGAGCTGAAGCGGATCAAGACAGAA ACCAGCCGAAGCAGCCGGAGCTGAAGCGGATCAAGACAGAA < 41bp 1 0.505337732940889 1 0.528499960899353 experiment 0.989324534118222 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559277 chr17:80559265 nonsynonymous SNV 0.032 1 9 hm5C_associated_SNPs_39665 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr11 65161541 65161541 1 + G A UCEC 65161556 + 65161536 65161576 41 GGAACGTGTTCTTCCCAAAGCGGCGGGAGCTCCAGGTGAGG GGAACATGTTCTTCCCAAAGCGGCGGGAGCTCCAGGTGAGG < 41bp 1 0.667883560004943 1 0.53642201423645 experiment 0.664232879990115 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65161556 chr11:65161541 nonsynonymous SNV 0.991 3 6 hm5C_associated_SNPs_39666 0 0 3 DDX24 POSTAR2 ENCODE chr11:65161484-65161571
64251 chr22 46681154 46681154 1 + C T UCEC 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGTGCTGAC < 41bp 1 0.110955262912827 1 0.13754877448082 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681154 nonsynonymous SNV 0.004 2 35 hm5C_associated_SNPs_39668 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr6 15496756 15496756 1 + C T UCEC 15496746 + 15496726 15496766 41 GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGCGGGAGGGGCT GGGCGGCAGCTGCGGGAGGGCCTGCAGCTGTGGGAGGGGCT < 41bp 1 0.0615671104283526 1 0.286925345659256 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496746 chr6:15496756 nonsynonymous SNV 0.999 5 31 hm5C_associated_SNPs_39669 0 0 18 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr6 15496756 15496756 1 + C T UCEC 15496765 + 15496745 15496785 41 GCCTGCAGCTGCGGGAGGGGCTGCGGAACTCCAAGAGGAGA GCCTGCAGCTGTGGGAGGGGCTGCGGAACTCCAAGAGGAGA < 41bp 1 0.62902244053037 1 0.427247226238251 experiment 0.74195511893926 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15496765 chr6:15496756 nonsynonymous SNV 0.999 5 12 hm5C_associated_SNPs_39670 0 0 18 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:15496709-15496779
64251 chr19 7670125 7670125 1 + G A UCEC 7670120 + 7670100 7670140 41 ATGCCCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCC ATGCCCCCACAGAGCACGTGCCCCCAGAGCTGTGGGAGCCC < 41bp 1 0.0498197841801849 1 0.024714320898056 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670120 chr19:7670125 synonymous SNV . 0 26 hm5C_associated_SNPs_39671 0 0 3 CDC40 POSTAR2 ENCODE chr19:7670048-7670129
64251 chr19 7670125 7670125 1 + G A UCEC 7670124 + 7670104 7670144 41 CCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCT CCCCACAGAGCACGTGCCCCCAGAGCTGTGGGAGCCCTTCT < 41bp 1 0.528927886931108 1 0.791458964347839 experiment 0.942144226137785 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670124 chr19:7670125 synonymous SNV . 0 22 hm5C_associated_SNPs_39672 0 0 3 CDC40 POSTAR2 ENCODE chr19:7670048-7670129
64251 chr19 33465005 33465005 1 + C T UCEC 33465022 + 33465002 33465042 41 ACCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT ACCTGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT < 41bp 1 0.163006106613217 1 0.106115251779556 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465022 chr19:33465005 nonsynonymous SNV 0.347 0 4 hm5C_associated_SNPs_39673 0 0 4 CPSF2 POSTAR2 GSE37401,GSM917670 chr19:33464996-33465029
64251 chr11 67069239 67069239 1 + G A UCEC 67069243 + 67069223 67069263 41 GACCAACACCCGGCCCGGTGCCCGCCCTCCTCCCCAGGCCA GACCAACACCCGGCCCAGTGCCCGCCCTCCTCCCCAGGCCA < 41bp 1 0.214907493009097 1 0.205197095870972 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKRD13D ENSG00000172932 CDS Human protein_coding chr11:67069243 chr11:67069239 nonsynonymous SNV 0.227 2 17 hm5C_associated_SNPs_39674 0 0 2 BUD13 POSTAR2 ENCODE chr11:67069177-67069272
64251 chr7 157159206 157159206 1 + G A UCEC 157159209 + 157159189 157159229 41 TTTTTAGCTAAGAAACGGGACATCTATGACAAATATGGCAA TTTTTAGCTAAGAAACGAGACATCTATGACAAATATGGCAA < 41bp 1 0.0482838276791669 1 0.0855221450328827 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157159209 chr7:157159206 synonymous SNV . 0 18 hm5C_associated_SNPs_39676 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:157159174-157159212
64251 chr6 142519642 142519642 1 + C T UCEC 142519636 + 142519616 142519656 41 CACTCAGCCAACTCAGCCATCATCATCTTCAACTTATGACC CACTCAGCCAACTCAGCCATCATCATTTTCAACTTATGACC < 41bp 1 0.610289304494515 1 0.119728684425354 experiment 0.77942139101097 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519636 chr6:142519642 nonsynonymous SNV 0.989 1 27 hm5C_associated_SNPs_39677 0 0 24 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:142519593-142519686
64251 chr19 49132407 49132407 1 + G A UCEC 49132399 + 49132379 49132419 41 AGAACCCCTGCCCATCCTGTCCCTCAACGGTGGGGGCCCAG AGAACCCCTGCCCATCCTGTCCCTCAACAGTGGGGGCCCAG < 41bp 1 0.0615963181201695 1 0.186941385269165 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132399 chr19:49132407 nonsynonymous SNV 0.920 1 29 hm5C_associated_SNPs_39679 0 0 1 HNRNPK POSTAR2 ENCODE chr19:49132323-49132427
64251 chr12 49724724 49724724 1 + C T UCEC 49724720 + 49724700 49724740 41 CTTTGAGACCCCCAGCAGGCCAGGCAGGTAAGGAGTTGGCT CTTTGAGACCCCCAGCAGGCCAGGTAGGTAAGGAGTTGGCT < 41bp 1 0.440854295234705 1 0.118706464767456 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TROAP ENSG00000135451 CDS Human protein_coding chr12:49724720 chr12:49724724 nonsynonymous SNV 0.631 2 25 hm5C_associated_SNPs_39680 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:49724720-49724740
64251 chr19 54964834 54964834 1 + A C UCEC 54964832 + 54964812 54964852 41 CAACACCAAGGGACTCTGAACCAGGTAACATCCTAGCCCAG CAACACCAAGGGACTCTGAACCCGGTAACATCCTAGCCCAG < 41bp 1 0.245296676404394 1 0.429027557373047 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54964832 chr19:54964834 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_39682 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:54964816-54964841
64251 chr14 39650825 39650825 1 + C T UCEC 39650831 + 39650811 39650851 41 GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC GTCGGAGTAGGGGCTGGGGACATAATAGAGATAGAAAGCAC < 41bp 1 0.720779410403806 1 0.274907499551773 experiment 0.558441179192387 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650831 chr14:39650825 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_39684 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr16 56867232 56867232 1 + G A UCEC 56867224 + 56867204 56867244 41 GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCA GCAGTTGCCTTTCTTTTCCGCATGGAGCAGCTGCGCTGCCA < 41bp 1 0.471531162374459 1 0.20397824048996 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867224 chr16:56867232 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_39685 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56867205-56867236
64251 chr20 37662900 37662900 1 + G A UCEC 37662905 + 37662885 37662925 41 CTACATGAGAGATGTGACTGCCATTGAATCGGCCTGGCTGT CTACATGAGAGATGTAACTGCCATTGAATCGGCCTGGCTGT < 41bp 1 0.0605353010304001 1 0.07066410779953 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX35 ENSG00000101452 CDS Human protein_coding chr20:37662905 chr20:37662900 synonymous SNV . 0 16 hm5C_associated_SNPs_39686 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr20:37662886-37662906
64251 chr2 27277609 27277609 1 + G A UCEC 27277595 + 27277575 27277615 41 TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAACCCCGT < 41bp 1 0.633426465096045 1 0.822610020637512 experiment 0.73314706980791 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27277595 chr2:27277609 synonymous SNV . 0 35 hm5C_associated_SNPs_39689 0 0 1 YBX3 POSTAR2 ENCODE chr2:27277497-27277618
64251 chr9 33366678 33366678 1 + C T UCEC 33366677 + 33366657 33366697 41 CCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTT CCTCCCATGAACAGAGACCACTGCCGGATCATCCATGACTT < 41bp 1 0.514225892469472 1 0.0985100269317627 experiment 0.971548215061057 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33366677 chr9:33366678 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_39690 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33366662-33366686
64251 chrX 153677069 153677069 1 + G A UCEC 153677085 + 153677065 153677105 41 CTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG CTGCAGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG < 41bp 1 0.666089201015767 1 0.764652013778687 experiment 0.667821597968467 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FAM50A ENSG00000071859 CDS Human protein_coding chrX:153677085 chrX:153677069 nonsynonymous SNV 0.998 3 5 hm5C_associated_SNPs_39691 0 0 6 RBFOX2 POSTAR2 ENCODE chrX:153677067-153677091
64251 chr22 38209490 38209490 1 + C T UCEC 38209473 + 38209453 38209493 41 TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGACGCA TCACTGCCTCCCTCCAGGCCCTGCTGACCCCAGAGGATGCA < 41bp 1 0.32339922806105 1 0.0277171730995178 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCAT ENSG00000100116 CDS Human protein_coding chr22:38209473 chr22:38209490 synonymous SNV . 0 38 hm5C_associated_SNPs_39692 0 0 3 BUD13 POSTAR2 ENCODE chr22:38209412-38209496
64251 chr2 234354289 234354289 1 + G A UCEC 234354284 + 234354264 234354304 41 CTTAGTGTCAGCTGGGAGTGCTGCCGCTCGGCACAGGGAAC CTTAGTGTCAGCTGGGAGTGCTGCCACTCGGCACAGGGAAC < 41bp 1 0.213340935938927 1 0.165090143680573 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DGKD ENSG00000077044 CDS Human protein_coding chr2:234354284 chr2:234354289 synonymous SNV . 0 26 hm5C_associated_SNPs_39693 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:234354266-234354291
64251 chr17 47004378 47004378 1 + G A UCEC 47004386 + 47004366 47004406 41 CCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTG CCCTCTTGATGCACCTGGGACTGATACGTCAGAAAGTGCTG < 41bp 1 0.221143231871492 1 0.100110977888107 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004386 chr17:47004378 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_39694 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:47004360-47004380
64251 chr19 2097277 2097277 1 + A G UCEC 2097268 + 2097248 2097288 41 CAGCCCGGGAGAAGCTGGACCAAGTGGCGACAGCAGTGTAC CAGCCCGGGAGAAGCTGGACCAAGTGGCGGCAGCAGTGTAC < 41bp 1 0.647157018132314 1 0.472919464111328 experiment 0.705685963735372 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IZUMO4 ENSG00000099840 CDS Human protein_coding chr19:2097268 chr19:2097277 nonsynonymous SNV 0.009 0 30 hm5C_associated_SNPs_39695 0 0 1 ZNF622 POSTAR2 ENCODE chr19:2097251-2097314
64251 chr6 15511626 15511626 1 + C T UCEC 15511609 + 15511589 15511629 41 CCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAACGTC CCAATGGCACCCCAGGGCTGCAGATGCTGGAAAGCAATGTC < 41bp 1 0.179397561111866 1 0.34252804517746 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JARID2 ENSG00000008083 CDS Human protein_coding chr6:15511609 chr6:15511626 synonymous SNV . 0 38 hm5C_associated_SNPs_39696 0 0 5 EFTUD2 POSTAR2 ENCODE chr6:15511615-15511654
64251 chr20 55982889 55982889 1 + A T UCEC 55982907 + 55982887 55982927 41 TGACAGGATGCAGTGAGGGGCGTTCCTGCCCCGAGGACTGT TGTCAGGATGCAGTGAGGGGCGTTCCTGCCCCGAGGACTGT < 41bp 1 0.0339153613363879 1 0.0582188069820404 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control RBM38 ENSG00000132819 CDS Human protein_coding chr20:55982907 chr20:55982889 nonsynonymous SNV 0.995 3 3 hm5C_associated_SNPs_39697 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:55982889-55982890
64251 chr3 38524764 38524764 1 + G A UCEC 38524770 + 38524750 38524790 41 CCTCGGACTGTCTCGTTTCCCTGGTGACCTCTGTCACCAAT CCTCGGACTGTCTCATTTCCCTGGTGACCTCTGTCACCAAT < 41bp 1 0.797859645117771 1 0.67262589931488 experiment 0.404280709764457 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524770 chr3:38524764 nonsynonymous SNV 0.996 1 15 hm5C_associated_SNPs_39698 1 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr3 142741791 142741791 1 + A G UCEC 142741800 + 142741780 142741820 41 TATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGC TATGATGGAACGTACGCTTCCCCCACCTCCATCCGGACTGC < 41bp 1 0.642305705686835 1 0.0450689196586609 experiment 0.715388588626329 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142741800 chr3:142741791 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_39699 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:142741747-142741791
64251 chr1 32626278 32626278 1 + C A UCEC 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACGTCTTGAAATGTTCCATCCTTAATCCTTTGTTAACGTGA < 41bp 1 0.157517562801082 1 0.488567173480988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626278 nonsynonymous SNV 0.999 1 11 hm5C_associated_SNPs_39700 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32626227-32626297
64251 chr9 19336381 19336381 1 + T G UCEC 19336394 + 19336374 19336414 41 AAAAGACTGTGCAAAGGTCACAGGTCTCCTCAATATCAGGT AAAAGACGGTGCAAAGGTCACAGGTCTCCTCAATATCAGGT < 41bp 1 0.396443845983891 1 0.228658318519592 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336394 chr9:19336381 synonymous SNV . 0 8 hm5C_associated_SNPs_39701 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:19336361-19336439
64251 chr2 26357872 26357872 1 + G A UCEC 26357860 + 26357840 26357880 41 GATATCAGCAGTGGAGGAGGCGTGACAGGCTGGAAGAGCAA GATATCAGCAGTGGAGGAGGCGTGACAGGCTGAAAGAGCAA < 41bp 1 0.706840787461327 1 0.469615191221237 experiment 0.586318425077347 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB10 ENSG00000084733 CDS Human protein_coding chr2:26357860 chr2:26357872 stopgain 1.000 1 33 hm5C_associated_SNPs_39703 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:26357860-26357900
64251 chr2 26357872 26357872 1 + G A UCEC 26357865 + 26357845 26357885 41 CAGCAGTGGAGGAGGCGTGACAGGCTGGAAGAGCAAATGCT CAGCAGTGGAGGAGGCGTGACAGGCTGAAAGAGCAAATGCT < 41bp 1 0.538560872398692 1 0.673292875289917 experiment 0.922878255202616 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAB10 ENSG00000084733 CDS Human protein_coding chr2:26357865 chr2:26357872 stopgain 1.000 1 28 hm5C_associated_SNPs_39704 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:26357860-26357900
64251 chr9 97686343 97686343 1 + A G UCEC 97686328 + 97686308 97686348 41 GGGAACCATCTCTGTGGGACCCGCCTCTGCCATGAAATTGC GGGAACCATCTCTGTGGGACCCGCCTCTGCCATGAGATTGC < 41bp 1 0.100798527609131 1 0.116914391517639 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97686328 chr9:97686343 synonymous SNV . 0 36 hm5C_associated_SNPs_39705 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:97686315-97686348
64251 chr20 31021634 31021634 1 + C T UCEC 31021621 + 31021601 31021641 41 TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATCGTCAGTC TCCTTTCCCGAAAAGAAGCCCCGGCTTGAAGATTGTCAGTC < 41bp 1 0.148777769668117 1 0.171661615371704 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021621 chr20:31021634 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_39706 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:31021611-31021648
64251 chr16 3339561 3339561 1 + G A UCEC 3339545 + 3339525 3339565 41 GGTCGCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATG GGTCGCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGAAATG < 41bp 1 0.0697868890674379 1 0.0605857670307159 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339545 chr16:3339561 nonsynonymous SNV 0.000 0 37 hm5C_associated_SNPs_39707 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr16 3339561 3339561 1 + G A UCEC 3339549 + 3339529 3339569 41 GCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGGAATGGAGC GCAAGGGGATTGGGCGCCTCCCCCAGAGGGTGAAATGGAGC < 41bp 1 0.590726011950746 1 0.56609570980072 experiment 0.818547976098508 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339549 chr16:3339561 nonsynonymous SNV 0.000 0 33 hm5C_associated_SNPs_39708 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:3339536-3339561
64251 chr16 29989111 29989111 1 + G A UCEC 29989108 + 29989088 29989128 41 GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA GCCACCATGCCAGCTGGGGGCCGAGCCGGGAGCCTGAAGGA < 41bp 1 0.32690908986343 1 0.503608584403992 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989108 chr16:29989111 synonymous SNV . 0 24 hm5C_associated_SNPs_39710 0 0 2 SF3B1 POSTAR2 ENCODE chr16:29989109-29989116
64251 chr16 29989111 29989111 1 + G A UCEC 29989109 + 29989089 29989129 41 CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC CCACCATGCCAGCTGGGGGCCGAGCCGGGAGCCTGAAGGAC < 41bp 1 0.337723094434654 1 0.515426278114319 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989109 chr16:29989111 synonymous SNV . 0 23 hm5C_associated_SNPs_39711 0 0 2 SF3B1 POSTAR2 ENCODE chr16:29989109-29989116
64251 chr6 44274733 44274733 1 - C T UCEC 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CGTCGAGCTGTGCATTTCTCCATGGAGATCTTAAAGGCACC < 41bp 1 0.440030453891191 1 0.849573612213135 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274733 nonsynonymous SNV 0.647 4 14 hm5C_associated_SNPs_39712 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:44274732-44274744
64251 chrX 152958756 152958756 1 + C T UCEC 152958738 + 152958718 152958758 41 GTGTGGATAGATGCGGGGACCCAGATTTTCTTTTCTTACGC GTGTGGATAGATGCGGGGACCCAGATTTTCTTTTCTTATGC < 41bp 1 0.568779784614126 1 0.143645882606506 experiment 0.862440430771748 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958738 chrX:152958756 synonymous SNV . 0 39 hm5C_associated_SNPs_39713 1 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152958722-152958757
64251 chr7 44733492 44733492 1 + G A UCEC 44733483 + 44733463 44733503 41 CCCTACCCCACTGACGTGGCCCGAGTGGTGAATGCCCCCAT CCCTACCCCACTGACGTGGCCCGAGTGGTAAATGCCCCCAT < 41bp 1 0.392153047860407 1 0.348213583230972 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44733483 chr7:44733492 synonymous SNV . 0 30 hm5C_associated_SNPs_39716 0 0 2 FMR1 POSTAR2 ENCODE chr7:44733485-44733548
64251 chr2 182784103 182784103 1 + G A UCEC 182784123 + 182784103 182784143 41 GCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCGCATG ACCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCGCATG < 41bp 1 0.773449974513895 1 0.169962376356125 experiment 0.453100050972209 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182784123 chr2:182784103 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_39717 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:182784069-182784119
64251 chr17 27938952 27938952 1 + A G UCEC 27938953 + 27938933 27938973 41 GCCATCACTGCAGAAGAATACTTCAACCCCAACTTTGAGCT GCCATCACTGCAGAAGAATGCTTCAACCCCAACTTTGAGCT < 41bp 1 0.28514821894224 1 0.300507992506027 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD13B ENSG00000198720 CDS Human protein_coding chr17:27938953 chr17:27938952 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_39718 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:27938948-27938979
64251 chr17 5264516 5264516 1 + G A UCEC 5264520 + 5264500 5264540 41 CAGGAGCATTTAGACAGCACCCGTGGCTCAGTTCATTCCTT CAGGAGCATTTAGACAACACCCGTGGCTCAGTTCATTCCTT < 41bp 1 0.169104665157124 1 0.337795794010162 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5264520 chr17:5264516 nonsynonymous SNV 0.985 2 17 hm5C_associated_SNPs_39719 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:5264500-5264520
64251 chr3 184045029 184045029 1 + G A UCEC 184045016 + 184044996 184045036 41 TCTTCCAGGAGTAGCTTGAGCCGAGAACGAGGCGAGAAAGC TCTTCCAGGAGTAGCTTGAGCCGAGAACGAGGCAAGAAAGC < 41bp 1 0.295159129283435 1 0.493088245391846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184045016 chr3:184045029 nonsynonymous SNV 0.999 0 34 hm5C_associated_SNPs_39723 0 0 24 FMR1 POSTAR2 GSE39682,GSM977615 chr3:184045001-184045041
64251 chr5 147796677 147796677 1 + G A UCEC 147796689 + 147796669 147796709 41 ACATCCACGACAACAATCACCATCATCCAGATGACTCAGAC ACATCCACAACAACAATCACCATCATCCAGATGACTCAGAC < 41bp 1 0.391008812789741 1 0.097696840763092 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147796689 chr5:147796677 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_39724 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr5:147796655-147796677
64251 chr1 39898742 39898742 1 + G A UCEC 39898725 + 39898705 39898745 41 GTTTACTTTTCAAAGGCTTTCTCCATTGACATTATTCGACA GTTTACTTTTCAAAGGCTTTCTCCATTGACATTATTCAACA < 41bp 1 0.231989300754101 1 0.95836079120636 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39898725 chr1:39898742 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_39726 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:39898716-39898742
64251 chr2 60987388 60987388 1 + A C UCEC 60987390 + 60987370 60987410 41 AATTAATTGACGCCATGAAACCATTTGGAGTGTTTGAAGAT AATTAATTGACGCCATGACACCATTTGGAGTGTTTGAAGAT < 41bp 1 0.0749940966139954 1 0.0652489066123962 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60987390 chr2:60987388 nonsynonymous SNV 0.999 2 19 hm5C_associated_SNPs_39727 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:60987377-60987429
64251 chr7 151817986 151817986 1 + G A UCEC 151818003 + 151817983 151818023 41 CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG CTCACTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG < 41bp 1 0.416589597822684 1 0.274689376354218 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151818003 chr7:151817986 nonsynonymous SNV 0.999 2 4 hm5C_associated_SNPs_39730 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:151817952-151817990
64251 chr12 110457001 110457001 1 + G A UCEC 110457008 + 110456988 110457028 41 GTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCG GTCACCACCGAACACTTCGACCTTTCCCAAGAAATGGAGCG < 41bp 1 0.0110707274003471 1 0.0631484687328339 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110457008 chr12:110457001 nonsynonymous SNV 0.735 0 14 hm5C_associated_SNPs_39731 0 0 1 GRWD1 POSTAR2 ENCODE chr12:110456964-110457103
64251 chr2 162226654 162226654 1 + G T UCEC 162226642 + 162226622 162226662 41 TCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATG TCAGTGTGGAGGCAGTTGATCCAGTGTTCCAATCTAAAATG < 41bp 1 0.543623499556453 1 0.343636393547058 experiment 0.912753000887095 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162226642 chr2:162226654 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_39732 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr2:162226615-162226656
64251 chr2 162226654 162226654 1 + G T UCEC 162226650 + 162226630 162226670 41 GAGGCAGTTGATCCAGTGTTCCAAGCTAAAATGTTGGATAT GAGGCAGTTGATCCAGTGTTCCAATCTAAAATGTTGGATAT < 41bp 1 0.190293813638519 1 0.391113460063934 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162226650 chr2:162226654 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_39733 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr2:162226615-162226656
64251 chr17 7592183 7592183 1 + G T UCEC 7592180 + 7592160 7592200 41 AGGAGCTACGGGAGGGGGACCCAGTTTCTCTCTCCACTCCC AGGAGCTACGGGAGGGGGACCCATTTTCTCTCTCCACTCCC < 41bp 1 0.109800790847223 1 0.0947650671005249 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592180 chr17:7592183 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_39734 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:7592183-7592184
64251 chr20 42341729 42341729 1 + C T UCEC 42341738 + 42341718 42341758 41 TGTCCACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTG TGTCCACACTGTCCAAGTCTCTATCCTTGGTAAGGCTTCTG < 41bp 1 0.0744555295585049 1 0.0574725866317749 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341738 chr20:42341729 nonsynonymous SNV 0.690 1 12 hm5C_associated_SNPs_39735 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:42341657-42341738
64251 chr20 42341729 42341729 1 + C T UCEC 42341742 + 42341722 42341762 41 CACACTGCCCAAGTCTCTATCCTTGGTAAGGCTTCTGCTCC CACACTGTCCAAGTCTCTATCCTTGGTAAGGCTTCTGCTCC < 41bp 1 0.0869307021325502 1 0.101165413856506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MYBL2 ENSG00000101057 CDS Human protein_coding chr20:42341742 chr20:42341729 nonsynonymous SNV 0.690 1 8 hm5C_associated_SNPs_39736 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:42341657-42341738
64251 chr1 10332318 10332318 1 + A C UCEC 10332306 + 10332286 10332326 41 GTATTTATTTTAGGAAGGAGCAAATATTAATAAGTCTCTTA GTATTTATTTTAGGAAGGAGCAAATATTAATACGTCTCTTA < 41bp 1 0.0426958591029395 1 0.157997131347656 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10332306 chr1:10332318 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_39737 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:10332313-10332348
64251 chr7 139107003 139107003 1 + G T UCEC 139107012 + 139106992 139107032 41 GAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAAT GAGATCGGAAATATAAGAAGCGGTCCTATGAGAGTGCTAAT < 41bp 1 0.146585613455569 1 0.413166046142578 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107012 chr7:139107003 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_39739 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107003 139107003 1 + G T UCEC 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAATATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA < 41bp 1 0.0772241626459681 1 0.0810203552246094 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107003 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_39740 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107003 139107003 1 + G T UCEC 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAATATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG < 41bp 1 0.154679586396767 1 0.0675919353961945 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107003 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_39741 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr17 18220885 18220885 1 + G A UCEC 18220876 + 18220856 18220896 41 TGCTGTATTGGGAAGGAGAGCGATGGTCAGTTGGTGCTGCC TGCTGTATTGGGAAGGAGAGCGATGGTCAATTGGTGCTGCC < 41bp 1 0.337386902494367 1 0.655269920825958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18220876 chr17:18220885 synonymous SNV . 0 30 hm5C_associated_SNPs_39743 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18220862-18220902
64251 chr3 196537515 196537515 1 + T G UCEC 196537520 + 196537500 196537540 41 CAAGATATGAAAAAATTGGACAAGGGTAAGTATTTGTGACT CAAGATATGAAAAAAGTGGACAAGGGTAAGTATTTGTGACT < 41bp 1 0.47523814706245 1 0.67487758398056 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196537520 chr3:196537515 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_39744 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:196537494-196537550
64251 chr16 4382302 4382302 1 + G A UCEC 4382296 + 4382276 4382316 41 CTCACCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCT CTCACCATGCACTCCCTGGACGAGCCACTCGACCTGAAGCT < 41bp 1 0.326029632779327 1 0.304642558097839 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382296 chr16:4382302 synonymous SNV . 0 27 hm5C_associated_SNPs_39745 0 0 1 YBX3 POSTAR2 ENCODE chr16:4382297-4382381
64251 chr16 4382302 4382302 1 + G A UCEC 4382300 + 4382280 4382320 41 CCATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGT CCATGCACTCCCTGGACGAGCCACTCGACCTGAAGCTGAGT < 41bp 1 0.0386540366666328 1 0.0166564285755157 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382300 chr16:4382302 synonymous SNV . 0 23 hm5C_associated_SNPs_39746 0 0 1 YBX3 POSTAR2 ENCODE chr16:4382297-4382381
64251 chr10 43292231 43292231 1 + G T UCEC 43292225 + 43292205 43292245 41 GACGATGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC GACGATGACCTTGAGAGGAGCTCAGCTGAAGAAGGGGAAGC < 41bp 1 0.395239391954651 1 0.140420734882355 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292225 chr10:43292231 synonymous SNV . 0 27 hm5C_associated_SNPs_39747 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr10 43292231 43292231 1 + G T UCEC 43292230 + 43292210 43292250 41 TGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGCGGAGG TGACCTTGAGAGGAGCTCAGCTGAAGAAGGGGAAGCGGAGG < 41bp 1 0.759921881496773 1 0.747608721256256 experiment 0.480156237006455 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292230 chr10:43292231 synonymous SNV . 0 22 hm5C_associated_SNPs_39748 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr2 54856378 54856378 1 + G T UCEC 54856361 + 54856341 54856381 41 CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACA CAGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAATACA < 41bp 1 0.0143084727523655 1 0.0339231789112091 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856361 chr2:54856378 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_39749 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856378 54856378 1 + G T UCEC 54856362 + 54856342 54856382 41 AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACAT AGTGGCCACTTTGAGCAGGCCATCAAGGAAGGCGAATACAT < 41bp 1 0.247856473230585 1 0.0410598516464233 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856362 chr2:54856378 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_39750 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr2 54856378 54856378 1 + G T UCEC 54856365 + 54856345 54856385 41 GGCCACTTTGAGCAGGCCATCAAGGAAGGCGAAGACATGAT GGCCACTTTGAGCAGGCCATCAAGGAAGGCGAATACATGAT < 41bp 1 0.592638889907467 1 0.764148950576782 experiment 0.814722220185065 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856365 chr2:54856378 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_39751 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:54856350-54856384
64251 chr6 33243801 33243801 1 + C A UCEC 33243783 + 33243763 33243803 41 ATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTCTT ATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTATT < 41bp 1 0.753194976895006 1 0.0966349840164185 experiment 0.493610046209988 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243783 chr6:33243801 nonsynonymous SNV 0.989 2 39 hm5C_associated_SNPs_39752 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:33243739-33243813
64251 chr2 236403465 236403465 1 + G T UCEC 236403477 + 236403457 236403497 41 CAGAACCAGATCCGGGAGCACGTCATCGCCATCGAAGGTGA CAGAACCATATCCGGGAGCACGTCATCGCCATCGAAGGTGA < 41bp 1 0.359147695547521 1 0.118291318416595 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236403477 chr2:236403465 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_39753 0 0 1 GRWD1 POSTAR2 ENCODE chr2:236403392-236403472
64251 chr11 68213918 68213918 1 + G A UCEC 68213907 + 68213887 68213927 41 GGCTTGGCTCTCCTCAGATCCTGAACCCGCCGCCCTCCCCG GGCTTGGCTCTCCTCAGATCCTGAACCCGCCACCCTCCCCG < 41bp 1 0.647123660550101 1 0.810072064399719 experiment 0.705752678899799 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68213907 chr11:68213918 synonymous SNV . 0 32 hm5C_associated_SNPs_39754 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:68213901-68213939
64251 chr17 4924127 4924127 1 + G A UCEC 4924120 + 4924100 4924140 41 GGCTGCAGGATCTGGAGAATCAGTACCGGAAAGAAAAGGAA GGCTGCAGGATCTGGAGAATCAGTACCAGAAAGAAAAGGAA < 41bp 1 0.506666785264037 1 0.803287506103516 experiment 0.986666429471927 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KIF1C ENSG00000129250 CDS Human protein_coding chr17:4924120 chr17:4924127 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_39755 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4924120-4924140
64251 chr17 4924127 4924127 1 + G A UCEC 4924125 + 4924105 4924145 41 CAGGATCTGGAGAATCAGTACCGGAAAGAAAAGGAAGAAGC CAGGATCTGGAGAATCAGTACCAGAAAGAAAAGGAAGAAGC < 41bp 1 0.325260394877489 1 0.149307399988174 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KIF1C ENSG00000129250 CDS Human protein_coding chr17:4924125 chr17:4924127 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_39756 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4924120-4924140
64251 chr17 4924127 4924127 1 + G A UCEC 4924126 + 4924106 4924146 41 AGGATCTGGAGAATCAGTACCGGAAAGAAAAGGAAGAAGCC AGGATCTGGAGAATCAGTACCAGAAAGAAAAGGAAGAAGCC < 41bp 1 0.45023003556877 1 0.624582886695862 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KIF1C ENSG00000129250 CDS Human protein_coding chr17:4924126 chr17:4924127 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_39757 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4924120-4924140
64251 chr12 551027 551027 1 + G T UCEC 551010 + 550990 551030 41 CCGTGACAGCAATAGACGGGCACATAAGATACAAGGAGAAC CCGTGACAGCAATAGACGGGCACATAAGATACAAGGATAAC < 41bp 1 0.218479400881138 1 0.0647686123847961 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC77 ENSG00000120647 CDS Human protein_coding chr12:551010 chr12:551027 stopgain 1.000 1 38 hm5C_associated_SNPs_39758 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:550999-551034
64251 chr1 206821317 206821317 1 + G A UCEC 206821305 + 206821285 206821325 41 CGTCAAGCAGCTGAGGAGATCCGGATTTTGGAGCATCTTAA CGTCAAGCAGCTGAGGAGATCCGGATTTTGGAACATCTTAA < 41bp 1 0.58785415133788 1 0.557754695415497 experiment 0.824291697324241 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821305 chr1:206821317 synonymous SNV . 0 33 hm5C_associated_SNPs_39759 0 0 4 RBM15 POSTAR2 ENCODE chr1:206821288-206821319
64251 chr19 46026024 46026024 1 + C T UCEC 46026006 + 46025986 46026026 41 CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGA CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTTGA < 41bp 1 0.563832972339102 1 0.341933906078339 experiment 0.872334055321795 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026006 chr19:46026024 stopgain 0.003 0 39 hm5C_associated_SNPs_39760 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:46026024-46026109
64251 chr19 46026024 46026024 1 + C T UCEC 46026007 + 46025987 46026027 41 CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAA CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTTGAA < 41bp 1 0.340489598623197 1 0.261053144931793 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026007 chr19:46026024 stopgain 0.003 0 38 hm5C_associated_SNPs_39761 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:46026024-46026109
64251 chr19 46026024 46026024 1 + C T UCEC 46026008 + 46025988 46026028 41 TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAG TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTTGAAG < 41bp 1 0.475212841352809 1 0.513307988643646 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026008 chr19:46026024 stopgain 0.003 0 37 hm5C_associated_SNPs_39762 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:46026024-46026109
64251 chr10 103826761 103826761 1 + C A UCEC 103826778 + 103826758 103826798 41 TTTCCAAGCCCTTCCTACAGCAGCCTGGGGTGCCACCCTCA TTTACAAGCCCTTCCTACAGCAGCCTGGGGTGCCACCCTCA < 41bp 1 0.420591858880857 1 0.0885947048664093 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103826778 chr10:103826761 nonsynonymous SNV 0.378 3 4 hm5C_associated_SNPs_39765 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:103826760-103826761
64251 chr3 20019810 20019810 1 + G A UCEC 20019825 + 20019805 20019845 41 GCACAGTCCTATGCAGATGACAATAGTTTATTATTCATGGA GCACAATCCTATGCAGATGACAATAGTTTATTATTCATGGA < 41bp 1 0.478686658219423 1 0.138228982686996 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAB5A ENSG00000144566 CDS Human protein_coding chr3:20019825 chr3:20019810 synonymous SNV . 0 6 hm5C_associated_SNPs_39767 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:20019801-20019847
64251 chr10 17277845 17277845 1 + G A UCEC 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGAATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG < 41bp 1 0.0619648514550018 1 0.507292807102203 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277845 synonymous SNV . 0 8 hm5C_associated_SNPs_39768 0 0 33 FUS POSTAR2 DRA001158,DRS012384 chr10:17277820-17277863
64251 chr10 88719418 88719418 1 + G T UCEC 88719427 + 88719407 88719447 41 AATGTTGTACAGAGCGTGACCTCAGGTGAGAAGCCCCAGGG AATGTTGTACATAGCGTGACCTCAGGTGAGAAGCCCCAGGG < 41bp 1 0.661473082962752 1 0.674708604812622 experiment 0.677053834074496 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNCG ENSG00000173267 CDS Human protein_coding chr10:88719427 chr10:88719418 nonsynonymous SNV 0.507 1 12 hm5C_associated_SNPs_39769 0 0 4 DDX55 POSTAR2 ENCODE chr10:88719395-88719431
64251 chr19 49377944 49377944 1 + G A UCEC 49377943 + 49377923 49377963 41 ACTTCAGGGGCTGGGGATATCGACCTGGAAAAGAGACAGAG ACTTCAGGGGCTGGGGATATCAACCTGGAAAAGAGACAGAG < 41bp 1 0.620343090868558 1 0.671644330024719 experiment 0.759313818262883 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377943 chr19:49377944 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_39770 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49377919-49377944
64251 chr8 61775119 61775119 1 + A G UCEC 61775123 + 61775103 61775143 41 CCAGATGGGTGGAGCTATGGCGCCTCCAATGAAGGATCTAC CCAGATGGGTGGAGCTGTGGCGCCTCCAATGAAGGATCTAC < 41bp 1 0.121809671865921 1 0.180670380592346 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHD7 ENSG00000171316 CDS Human protein_coding chr8:61775123 chr8:61775119 nonsynonymous SNV 0.996 2 17 hm5C_associated_SNPs_39771 0 0 1 BUD13 POSTAR2 ENCODE chr8:61775091-61775142
64251 chrX 70787353 70787353 1 + C A UCEC 70787359 + 70787339 70787379 41 CCCTATTTTAGATTCTGAAGCGTGTTCCCAATAGTGTACTC CCCTATTTTAGATTATGAAGCGTGTTCCCAATAGTGTACTC < 41bp 1 0.222911182256681 1 0.0636637508869171 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70787359 chrX:70787353 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_39772 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787340-70787400
64251 chr1 54670719 54670719 1 + G T UCEC 54670699 + 54670679 54670719 41 ATTACCTCAAAGGTGTAAAGCAGGCCCTCTGGCTCACCAAG ATTACCTCAAAGGTGTAAAGCAGGCCCTCTGGCTCACCAAT < 41bp 1 0.331189077565729 1 0.769272863864899 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54670699 chr1:54670719 nonsynonymous SNV 0.987 4 41 hm5C_associated_SNPs_39773 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:54670698-54670744
64251 chr11 61491043 61491043 1 + C T UCEC 61491024 + 61491004 61491044 41 ACCAAGAGGAGGCAGCGTAACCTGCGGACCTACAACCTGCG ACCAAGAGGAGGCAGCGTAACCTGCGGACCTACAACCTGTG < 41bp 1 0.1062756031457 1 0.105314940214157 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61491024 chr11:61491043 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_39774 0 0 1 PRPF8 POSTAR2 ENCODE chr11:61491034-61491083
64251 chr20 39721177 39721177 1 + T G UCEC 39721195 + 39721175 39721215 41 ATTTGCCCCACCATATGAGCCTCTTCCAGAGAATGTCAAGT ATGTGCCCCACCATATGAGCCTCTTCCAGAGAATGTCAAGT < 41bp 1 0.0689234539420216 1 0.0365831851959229 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39721195 chr20:39721177 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_39775 0 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:39721140-39721180
64251 chr1 171501770 171501770 1 + C T UCEC 171501758 + 171501738 171501778 41 AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAATGGGAGCGT < 41bp 1 0.611162889790104 1 0.748581349849701 experiment 0.777674220419793 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171501758 chr1:171501770 nonsynonymous SNV 0.937 2 33 hm5C_associated_SNPs_39777 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr1:171501730-171501771
64251 chr1 44069428 44069428 1 + G T UCEC 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGCGCGGCCCAACACCATATATTTCGGCAA < 41bp 1 0.368174682355423 1 0.134082943201065 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069428 nonsynonymous SNV 0.993 3 31 hm5C_associated_SNPs_39778 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:44069421-44069438
64251 chr17 37359351 37359351 1 + C T UCEC 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATTGA < 41bp 1 0.19790657199605 1 0.0841534435749054 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359351 synonymous SNV . 0 39 hm5C_associated_SNPs_39779 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359351 37359351 1 + C T UCEC 37359334 + 37359314 37359354 41 GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGAT GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATTGAT < 41bp 1 0.736763407610253 1 0.198298096656799 experiment 0.526473184779494 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359334 chr17:37359351 synonymous SNV . 0 38 hm5C_associated_SNPs_39780 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr16 48395715 48395715 1 - C T UCEC 48395730 - 48395710 48395750 41 AAAAATACGATGGTCACCAGCAGTTCTTCGCAATCGTACAG AAAAATACGATGGTCACCAGCAGTTCTTCGCAATCATACAG < 41bp 1 0.216055300640972 1 0.371900588274002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SIAH1 ENSG00000102910;ENSG00000196470 CDS Human other chr16:48395730 chr16:48395715 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_39781 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:48395686-48395723
64251 chr12 98941386 98941386 1 + G A UCEC 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGACCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA < 41bp 1 0.704759928903363 1 0.349451750516891 experiment 0.590480142193275 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941386 nonsynonymous SNV 0.998 2 5 hm5C_associated_SNPs_39782 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:98941350-98941391
64251 chr6 31593317 31593317 1 + G A UCEC 31593332 + 31593312 31593352 41 GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC GTCATAATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC < 41bp 1 0.659592515275471 1 0.484743595123291 experiment 0.680814969449058 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593332 chr6:31593317 nonsynonymous SNV 0.999 0 6 hm5C_associated_SNPs_39783 0 0 38 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:31593317-31593336
64251 chr1 63282274 63282274 1 + G A UCEC 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CAGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA < 41bp 1 0.412618589890151 1 0.126147538423538 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282274 synonymous SNV . 0 2 hm5C_associated_SNPs_39784 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:63282245-63282280
64251 chr16 84695577 84695577 1 + G T UCEC 84695562 + 84695542 84695582 41 GGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGT GGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAATACCGT < 41bp 1 0.188346936631844 1 0.120462447404861 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695562 chr16:84695577 nonsynonymous SNV 0.996 1 36 hm5C_associated_SNPs_39786 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:84695536-84695577
64251 chr13 115037798 115037798 1 + G A UCEC 115037793 + 115037773 115037813 41 AGACTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCA AGACTGCAGAAGAAACGGGGCTTACACCATTGGAAACCTCA < 41bp 1 0.0613173202759607 1 0.0707065761089325 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC16 ENSG00000130177 CDS Human protein_coding chr13:115037793 chr13:115037798 synonymous SNV . 0 26 hm5C_associated_SNPs_39787 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:115037780-115037800
64251 chr9 132863427 132863427 1 + C T UCEC 132863429 + 132863409 132863449 41 CACCATTGCACTCATTGGCACTGGCTGGGCTTTCATTAAGC CACCATTGCACTCATTGGTACTGGCTGGGCTTTCATTAAGC < 41bp 1 0.186786393158329 1 0.635406970977783 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GPR107 ENSG00000148358 CDS Human protein_coding chr9:132863429 chr9:132863427 synonymous SNV . 0 19 hm5C_associated_SNPs_39788 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr9:132863416-132863429
64251 chr10 89474567 89474567 1 + T G UCEC 89474562 + 89474542 89474582 41 TCCTGAGCGTGTGCTTAAAACCAATTTGTCCACAGTGAGTG TCCTGAGCGTGTGCTTAAAACCAATGTGTCCACAGTGAGTG < 41bp 1 0.284238151184488 1 0.0579856336116791 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89474562 chr10:89474567 nonsynonymous SNV 0.988 0 26 hm5C_associated_SNPs_39792 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:89474554-89474580
64251 chr8 64099567 64099567 1 + G A UCEC 64099584 + 64099564 64099604 41 AAGGACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCT AAGAACCTCAGCCACAGGCCCAGCCTCACCAAGTGCAGCCT < 41bp 1 0.315426213574034 1 0.108263373374939 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64099584 chr8:64099567 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_39793 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:64099560-64099580
64251 chr11 58347080 58347080 1 + A G UCEC 58347094 + 58347074 58347114 41 GCAAGAAGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG GCAAGAGGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG < 41bp 1 0.692614283402631 1 0.173291057348251 experiment 0.614771433194739 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58347094 chr11:58347080 nonsynonymous SNV 1.000 0 7 hm5C_associated_SNPs_39799 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:58347055-58347093
64251 chr1 112305367 112305367 1 + G A UCEC 112305377 + 112305357 112305397 41 TGGATTGGGAGACATACATGCATCGGATTGGGAGAGCTGGC TGGATTGGGAAACATACATGCATCGGATTGGGAGAGCTGGC < 41bp 1 0.405635061596728 1 0.146975219249725 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305377 chr1:112305367 synonymous SNV . 0 11 hm5C_associated_SNPs_39800 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:112305319-112305375
64251 chr14 20943231 20943231 1 + C T UCEC 20943217 + 20943197 20943237 41 GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCC GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATTGTTTCC < 41bp 1 0.49740159698832 1 0.297461032867432 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 CDS Human protein_coding chr14:20943217 chr14:20943231 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_39801 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20943220-20943260
64251 chr3 123348371 123348371 1 + G T UCEC 123348379 + 123348359 123348399 41 GGCATCGTCGGAGATCTCATCGAATGCCTCGTCGTCGAAGT GGCATCGTCGGATATCTCATCGAATGCCTCGTCGTCGAAGT < 41bp 1 0.492072832839362 1 0.293107241392136 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MYLK ENSG00000065534 CDS Human protein_coding chr3:123348379 chr3:123348371 synonymous SNV . 0 13 hm5C_associated_SNPs_39804 0 0 2 HNRNPD POSTAR2 GSE52971,GSM1279664 chr3:123348334-123348375
64251 chrX 48369835 48369835 1 + G A UCEC 48369821 + 48369801 48369841 41 GCTGTTCCTCTGCCGACATTCCTCCCATCGAGGCGTCTTCC GCTGTTCCTCTGCCGACATTCCTCCCATCGAGGCATCTTCC < 41bp 1 0.0775056802184394 1 0.105169266462326 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PORCN ENSG00000102312 CDS Human protein_coding chrX:48369821 chrX:48369835 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_39809 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chrX:48369835-48369836
64251 chr21 30715110 30715110 1 + G T UCEC 30715106 + 30715086 30715126 41 TGTCGTCAGAGTGGTGGGATCTCAGATTTCTGTCAGCAGAT TGTCGTCAGAGTGGTGGGATCTCATATTTCTGTCAGCAGAT < 41bp 1 0.433798719191295 1 0.498398393392563 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715106 chr21:30715110 nonsynonymous SNV 0.977 5 25 hm5C_associated_SNPs_39812 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30715053-30715120
64251 chr21 30715110 30715110 1 + G T UCEC 30715122 + 30715102 30715142 41 GGATCTCAGATTTCTGTCAGCAGATGACTGATAAATGTACT GGATCTCATATTTCTGTCAGCAGATGACTGATAAATGTACT < 41bp 1 0.193365871047582 1 0.609152495861053 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715122 chr21:30715110 nonsynonymous SNV 0.977 5 9 hm5C_associated_SNPs_39813 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30715053-30715120
64251 chr11 6631802 6631802 1 + A G UCEC 6631793 + 6631773 6631813 41 TGAAGACCCTGCAAAGCGACCCAAATTTGACATGATTGTGC TGAAGACCCTGCAAAGCGACCCAAATTTGGCATGATTGTGC < 41bp 1 0.196170466456544 1 0.0597631633281708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631793 chr11:6631802 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_39814 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:6631730-6631833
64251 chr12 70704707 70704707 1 + G T UCEC 70704725 + 70704705 70704745 41 AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA AATAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA < 41bp 1 0.76965965457843 1 0.491215169429779 experiment 0.460680690843139 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70704725 chr12:70704707 stopgain 1.000 4 3 hm5C_associated_SNPs_39815 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:70704691-70704731
64251 chr15 64792186 64792186 1 + C A UCEC 64792174 + 64792154 64792194 41 CAGAAAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGA CAGAAAAGGATCCTGGGGTCCTCCAGCCAGTTACCTTGGGA < 41bp 1 0.559769919281328 1 0.777809381484985 experiment 0.880460161437343 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64792174 chr15:64792186 nonsynonymous SNV 0.995 0 33 hm5C_associated_SNPs_39817 0 0 6 EIF3H POSTAR2 ENCODE chr15:64792152-64792314
64251 chr11 62653070 62653070 1 + T G UCEC 62653068 + 62653048 62653088 41 ATTGGCCTGGATGCAGCTGCCCTTCCTGGACAGGTACTGCT ATTGGCCTGGATGCAGCTGCCCGTCCTGGACAGGTACTGCT < 41bp 1 0.0978115902393773 1 0.0414822399616241 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62653068 chr11:62653070 nonsynonymous SNV 0.769 4 23 hm5C_associated_SNPs_39818 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62653056-62653080
64251 chr11 62653070 62653070 1 + T G UCEC 62653069 + 62653049 62653089 41 TTGGCCTGGATGCAGCTGCCCTTCCTGGACAGGTACTGCTT TTGGCCTGGATGCAGCTGCCCGTCCTGGACAGGTACTGCTT < 41bp 1 0.13980522469747 1 0.0992474853992462 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62653069 chr11:62653070 nonsynonymous SNV 0.769 4 22 hm5C_associated_SNPs_39819 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62653056-62653080
64251 chr1 26136283 26136283 1 + G A UCEC 26136269 + 26136249 26136289 41 CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCC CATCATCCTCTCCAAAGACGCCACCCACGTCCGCAACTTCC < 41bp 1 0.037809886725062 1 0.111380010843277 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136269 chr1:26136283 nonsynonymous SNV 0.664 1 35 hm5C_associated_SNPs_39820 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136283 26136283 1 + G A UCEC 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGACGCCACCCACGTCCGCAACTTCCG < 41bp 1 0.104217155244986 1 0.0444973111152649 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136283 nonsynonymous SNV 0.664 1 34 hm5C_associated_SNPs_39821 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136283 26136283 1 + G A UCEC 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGACGCCACCCACGTCCGCAACTTCCGGCT < 41bp 1 0.125841210127134 1 0.09086874127388 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136283 nonsynonymous SNV 0.664 1 31 hm5C_associated_SNPs_39822 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136283 26136283 1 + G A UCEC 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGACGCCACCCACGTCCGCAACTTCCGGCTC < 41bp 1 0.520455499999473 1 0.0421298742294312 experiment 0.959089000001054 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136283 nonsynonymous SNV 0.664 1 30 hm5C_associated_SNPs_39823 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chrX 147022111 147022111 1 + T C UCEC 147022104 + 147022084 147022124 41 TTCTTTTTCAGGGTATGGTACCATTTGTTTTTGTGGGAACA TTCTTTTTCAGGGTATGGTACCATTTGCTTTTGTGGGAACA < 41bp 1 0.0491452567590744 1 0.0383423864841461 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FMR1 ENSG00000102081 CDS Human protein_coding chrX:147022104 chrX:147022111 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_39824 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147022080-147022160
64251 chr14 105916469 105916469 1 + C T UCEC 105916480 + 105916460 105916500 41 CTGCGGCATCGGGAGCTGTTCCTCTCCCGGCAGCTGGAGTC CTGCGGCATTGGGAGCTGTTCCTCTCCCGGCAGCTGGAGTC < 41bp 1 0.161243268372615 1 0.0851139724254608 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105916480 chr14:105916469 nonsynonymous SNV 0.986 4 10 hm5C_associated_SNPs_39826 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105916450-105916498
64251 chr1 12316536 12316536 1 + G A UCEC 12316538 + 12316518 12316558 41 TTGTGATATTCAGCTGGAGACCATTCCCTTGAAACTCTCTC TTGTGATATTCAGCTGGAAACCATTCCCTTGAAACTCTCTC < 41bp 1 0.0212203642854807 1 0.0888688862323761 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS13D ENSG00000048707 CDS Human protein_coding chr1:12316538 chr1:12316536 synonymous SNV . 0 19 hm5C_associated_SNPs_39827 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:12316522-12316548
64251 chr17 7838350 7838350 1 + G A UCEC 7838362 + 7838342 7838382 41 CAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGC CAGCCCAAACCCTGGAGGAGCTGTTTCCCCGCTACACCAGC < 41bp 1 0.161614931744154 1 0.0803281962871552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNTROB ENSG00000170037 CDS Human protein_coding chr17:7838362 chr17:7838350 nonsynonymous SNV 0.946 4 9 hm5C_associated_SNPs_39828 0 0 1 U2AF1 POSTAR2 ENCODE chr17:7838307-7838386
64251 chr4 103522107 103522107 1 + G T UCEC 103522101 + 103522081 103522121 41 ATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT ATTCTCAACTTGTGAGGGATCTACTATAAGTCACATCTGGT < 41bp 1 0.177742008244354 1 0.435966968536377 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103522101 chr4:103522107 stopgain 0.993 0 27 hm5C_associated_SNPs_39829 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:103522092-103522126
64251 chr1 161719602 161719602 1 + C T UCEC 161719587 + 161719567 161719607 41 AGCCGCCTTGTCTCTGGGCGCGGCCATGTTGGAGGCTCCGG AGCCGCCTTGTCTCTGGGCGCGGCCATGTTGGAGGTTCCGG < 41bp 1 0.537095399036526 1 0.224214553833008 experiment 0.925809201926947 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719587 chr1:161719602 nonsynonymous SNV 0.196 0 36 hm5C_associated_SNPs_39830 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:161719598-161719625
64251 chr15 22955236 22955236 1 + G A UCEC 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGAGCGGCTTCAACATAAAAGTACCACGCCG < 41bp 1 0.741675744073761 1 0.357343167066574 experiment 0.516648511852478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955236 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_39831 0 0 7 GRWD1 POSTAR2 ENCODE chr15:22955131-22955243
64251 chr11 71946468 71946468 1 + C T UCEC 71946459 + 71946439 71946479 41 GCTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACC GCTCCATGAAGGTGCGGGTGCCCACGGAGTGCCTGGGCACC < 41bp 1 0.0951028818933191 1 0.101585388183594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946459 chr11:71946468 nonsynonymous SNV 0.997 4 30 hm5C_associated_SNPs_39832 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946468 71946468 1 + C T UCEC 71946460 + 71946440 71946480 41 CTCCATGAAGGTGCGGGTGCCCACGGAGCGCCTGGGCACCC CTCCATGAAGGTGCGGGTGCCCACGGAGTGCCTGGGCACCC < 41bp 1 0.320692048677404 1 0.188982576131821 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946460 chr11:71946468 nonsynonymous SNV 0.997 4 29 hm5C_associated_SNPs_39833 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946468 71946468 1 + C T UCEC 71946476 + 71946456 71946496 41 GTGCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGG GTGCCCACGGAGTGCCTGGGCACCCGTGAGCGGCTCTACGG < 41bp 1 0.410197184578259 1 0.0302527844905853 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946476 chr11:71946468 nonsynonymous SNV 0.997 4 13 hm5C_associated_SNPs_39834 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946468 71946468 1 + C T UCEC 71946478 + 71946458 71946498 41 GCCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTG GCCCACGGAGTGCCTGGGCACCCGTGAGCGGCTCTACGGTG < 41bp 1 0.364747660015713 1 0.0756767988204956 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946478 chr11:71946468 nonsynonymous SNV 0.997 4 11 hm5C_associated_SNPs_39835 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946468 71946468 1 + C T UCEC 71946479 + 71946459 71946499 41 CCCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGG CCCACGGAGTGCCTGGGCACCCGTGAGCGGCTCTACGGTGG < 41bp 1 0.189207649910988 1 0.379650801420212 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946479 chr11:71946468 nonsynonymous SNV 0.997 4 10 hm5C_associated_SNPs_39836 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr11 71946468 71946468 1 + C T UCEC 71946480 + 71946460 71946500 41 CCACGGAGCGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG CCACGGAGTGCCTGGGCACCCGTGAGCGGCTCTACGGTGGG < 41bp 1 0.765368918608755 1 0.561986088752747 experiment 0.469262162782489 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71946480 chr11:71946468 nonsynonymous SNV 0.997 4 9 hm5C_associated_SNPs_39837 0 0 1 EIF3H POSTAR2 ENCODE chr11:71946431-71946478
64251 chr3 57293973 57293973 1 + C T UCEC 57293965 + 57293945 57293985 41 ATGTTGTTTATGAAACTATGCGCCAAATCTTAGCTGCCCGG ATGTTGTTTATGAAACTATGCGCCAAATTTTAGCTGCCCGG < 41bp 1 0.756672922289154 1 0.198619544506073 experiment 0.486654155421693 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57293965 chr3:57293973 synonymous SNV . 0 29 hm5C_associated_SNPs_39838 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:57293953-57293991
64251 chr9 139752716 139752716 1 + T A UCEC 139752709 + 139752689 139752729 41 GATGATCTGCTCCTCCAGGACGGGCCCTGCCCTCAGCCAGG GATGATCTGCTCCTCCAGGACGGGCCCAGCCCTCAGCCAGG < 41bp 1 0.529347163691863 1 0.768393099308014 experiment 0.941305672616275 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139752709 chr9:139752716 nonsynonymous SNV 0.947 4 28 hm5C_associated_SNPs_39839 0 0 2 GRWD1 POSTAR2 ENCODE chr9:139752681-139752727
64251 chr3 107524250 107524250 1 + A G UCEC 107524266 + 107524246 107524286 41 ATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATT ATGGGCAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATT < 41bp 1 0.520374077675059 1 0.239234089851379 experiment 0.959251844649881 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BBX ENSG00000114439 CDS Human protein_coding chr3:107524266 chr3:107524250 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_39840 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:107524222-107524250
64251 chr3 50091823 50091823 1 + G T UCEC 50091805 + 50091785 50091825 41 TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAG TGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAATAG < 41bp 1 0.0648999082664504 1 0.0214432179927826 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091805 chr3:50091823 stopgain 0.950 1 39 hm5C_associated_SNPs_39841 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50091795-50091825
64251 chr16 57486761 57486761 1 + G A UCEC 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAACAGTTGCAGCACCGCATCCTGACGGCAGCCCTT < 41bp 1 0.57701284986109 1 0.720412135124207 experiment 0.84597430027782 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486761 synonymous SNV . 0 8 hm5C_associated_SNPs_39843 0 0 2 PPIG POSTAR2 ENCODE chr16:57486754-57486851
64251 chr2 232035381 232035381 1 + A G UCEC 232035362 + 232035342 232035382 41 ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAAC ACCTGTGGCAGCACATGGCCCAAAAATCGAGGAGGAGGAGC < 41bp 1 0.599132921080127 1 0.0963594019412994 experiment 0.801734157839746 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232035362 chr2:232035381 synonymous SNV . 0 40 hm5C_associated_SNPs_39844 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:232035380-232035381
64251 chr7 91735008 91735008 1 + C T UCEC 91735017 + 91734997 91735037 41 AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT AATTTTTGGTTTGACGGTGGCATCGAGTCACAGGTTCTGTT < 41bp 1 0.109460808164268 1 0.203256607055664 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91735017 chr7:91735008 stopgain 0.998 0 12 hm5C_associated_SNPs_39845 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:91735000-91735020
64251 chr13 94679995 94679995 1 + C T UCEC 94679996 + 94679976 94680016 41 TCTGCAGGTCAGCCCAACCCCAGGGTGTATCCGTGCCCTCA TCTGCAGGTCAGCCCAACCTCAGGGTGTATCCGTGCCCTCA < 41bp 1 0.731262978114213 1 0.826243996620178 experiment 0.537474043771573 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPC6 ENSG00000183098 CDS Human protein_coding chr13:94679996 chr13:94679995 nonsynonymous SNV 0.991 1 20 hm5C_associated_SNPs_39846 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:94679980-94680000
64251 chr19 541474 541474 1 + C T UCEC 541454 + 541434 541474 41 CGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTAC CGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTAT < 41bp 1 0.169433779614673 1 0.22138300538063 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC34 ENSG00000099804 CDS Human protein_coding chr19:541454 chr19:541474 synonymous SNV . 0 41 hm5C_associated_SNPs_39847 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:541451-541478
64251 chr1 1564879 1564879 1 + C T UCEC 1564862 + 1564842 1564882 41 ACGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTG ACGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGTCTG < 41bp 1 0.683671164387997 1 0.302550882101059 experiment 0.632657671224006 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564862 chr1:1564879 synonymous SNV . 0 38 hm5C_associated_SNPs_39848 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:1564878-1564879
64251 chr1 1564879 1564879 1 + C T UCEC 1564863 + 1564843 1564883 41 CGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGG CGTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGTCTGG < 41bp 1 0.436520597327122 1 0.660103321075439 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564863 chr1:1564879 synonymous SNV . 0 37 hm5C_associated_SNPs_39849 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:1564878-1564879
64251 chr1 1564879 1564879 1 + C T UCEC 1564864 + 1564844 1564884 41 GTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGT GTGGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGTCTGGT < 41bp 1 0.570734865240233 1 0.73281317949295 experiment 0.858530269519533 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564864 chr1:1564879 synonymous SNV . 0 36 hm5C_associated_SNPs_39850 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:1564878-1564879
64251 chr1 1564879 1564879 1 + C T UCEC 1564869 + 1564849 1564889 41 CGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCT CGCCGCGCCGGGGCCCGAGGCCGCTGAGTGTCTGGTGTGCT < 41bp 1 0.227084378317038 1 0.217545986175537 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564869 chr1:1564879 synonymous SNV . 0 31 hm5C_associated_SNPs_39851 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:1564878-1564879
64251 chr1 1564879 1564879 1 + C T UCEC 1564870 + 1564850 1564890 41 GCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCTC GCCGCGCCGGGGCCCGAGGCCGCTGAGTGTCTGGTGTGCTC < 41bp 1 0.550613578925217 1 0.439060181379318 experiment 0.898772842149565 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MIB2 ENSG00000197530 CDS Human protein_coding chr1:1564870 chr1:1564879 synonymous SNV . 0 30 hm5C_associated_SNPs_39852 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:1564878-1564879
64251 chr20 39977792 39977792 1 + C T UCEC 39977802 + 39977782 39977822 41 ACTCGGATGGCGAGTGGCCCCCCCAGGCCAGGTAAGAGTCC ACTCGGATGGTGAGTGGCCCCCCCAGGCCAGGTAAGAGTCC < 41bp 1 0.571116387124034 1 0.433913618326187 experiment 0.857767225751933 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39977802 chr20:39977792 synonymous SNV . 0 11 hm5C_associated_SNPs_39854 0 0 5 BUD13 POSTAR2 ENCODE chr20:39977789-39977812
64251 chr6 7578787 7578787 1 + G T UCEC 7578790 + 7578770 7578810 41 TGCTGAAGAGTTTGGAAGATCTGAAGGTAATTTATACTGTC TGCTGAAGAGTTTGGAATATCTGAAGGTAATTTATACTGTC < 41bp 1 0.632528505835512 1 0.503294348716736 experiment 0.734942988328976 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7578790 chr6:7578787 nonsynonymous SNV 1.000 5 18 hm5C_associated_SNPs_39855 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7578713-7578787
64251 chrX 152958980 152958980 1 + C A UCEC 152958977 + 152958957 152958997 41 TTCTTTGCTGGCTTCGTGGTCTTCTCCATCCTGGGCTTCAT TTCTTTGCTGGCTTCGTGGTCTTATCCATCCTGGGCTTCAT < 41bp 1 0.0850808943971229 1 0.0371498763561249 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958977 chrX:152958980 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_39856 0 0 6 DDX24 POSTAR2 ENCODE chrX:152958978-152959038
64251 chrX 152958980 152958980 1 + C A UCEC 152958983 + 152958963 152959003 41 GCTGGCTTCGTGGTCTTCTCCATCCTGGGCTTCATGGCTGC GCTGGCTTCGTGGTCTTATCCATCCTGGGCTTCATGGCTGC < 41bp 1 0.326621366231245 1 0.646557509899139 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152958983 chrX:152958980 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_39857 0 0 6 DDX24 POSTAR2 ENCODE chrX:152958978-152959038
64251 chr12 62918958 62918958 1 + C A UCEC 62918965 + 62918945 62918985 41 ACAGTCCTTGTTTCTTGTCCCCCCTACTGGAAATCCTGCAA ACAGTCCTTGTTTATTGTCCCCCCTACTGGAAATCCTGCAA < 41bp 1 0.138494895983404 1 0.0526989698410034 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MON2 ENSG00000061987 CDS Human protein_coding chr12:62918965 chr12:62918958 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_39859 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr12:62918933-62918969
64251 chr11 62550241 62550241 1 + C T UCEC 62550249 + 62550229 62550269 41 GCAGATCCTGTGCGGCCGCTCTGCTGCCACTATGGAGCCGT GCAGATCCTGTGTGGCCGCTCTGCTGCCACTATGGAGCCGT < 41bp 1 0.701147476029735 1 0.456086724996567 experiment 0.59770504794053 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62550249 chr11:62550241 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_39860 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:62550232-62550272
64251 chr1 6679984 6679984 1 + G A UCEC 6679994 + 6679974 6680014 41 GTCTCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTCTT GTCTCTGACCACTGCTTTAGCCACCTGCAGCCTACTCTCTT < 41bp 1 0.182334655701098 1 0.0517545938491821 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679994 chr1:6679984 nonsynonymous SNV 0.990 1 11 hm5C_associated_SNPs_39861 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:6679980-6680000
64251 chr1 6679984 6679984 1 + G A UCEC 6679997 + 6679977 6680017 41 TCTGACCGCTGCTTTAGCCACCTGCAGCCTACTCTCTTGCA TCTGACCACTGCTTTAGCCACCTGCAGCCTACTCTCTTGCA < 41bp 1 0.0805039485065633 1 0.0999139547348022 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679997 chr1:6679984 nonsynonymous SNV 0.990 1 8 hm5C_associated_SNPs_39862 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:6679980-6680000
64251 chr2 102486863 102486863 1 + C A UCEC 102486859 + 102486839 102486879 41 ATGACCCCATCCAAGGAGGGCACTCTAATCGTCCGCCAGGT ATGACCCCATCCAAGGAGGGCACTATAATCGTCCGCCAGGT < 41bp 1 0.363779324390321 1 0.150576144456863 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486859 chr2:102486863 nonsynonymous SNV 0.786 4 25 hm5C_associated_SNPs_39863 0 0 7 CELF2 POSTAR2 GSE71264,GSM1831620 chr2:102486860-102486880
64251 chr17 46133827 46133827 1 + G A UCEC 46133838 + 46133818 46133858 41 ATAGTCACCGCCAGAAGGAGCAGGATGTGGAGAAGGAGCTG ATAGTCACCACCAGAAGGAGCAGGATGTGGAGAAGGAGCTG < 41bp 1 0.765693348768763 1 0.589614748954773 experiment 0.468613302462473 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133838 chr17:46133827 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_39864 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr19 42398354 42398354 1 + C T UCEC 42398364 + 42398344 42398384 41 GACAAGAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT GACAAGAAGTTGGGGAGGAACTTCTTCCGGAAAAAGGTGCT < 41bp 1 0.139099956382415 1 0.349216103553772 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42398364 chr19:42398354 nonsynonymous SNV 0.989 0 11 hm5C_associated_SNPs_39865 0 0 1 DDX24 POSTAR2 ENCODE chr19:42398332-42398365
64251 chr17 57743540 57743540 1 + G A UCEC 57743560 + 57743540 57743580 41 GCCCATCTGAAGGTCCTTTACAGACGCGGTTACTTGAGATG ACCCATCTGAAGGTCCTTTACAGACGCGGTTACTTGAGATG < 41bp 1 0.529292357303803 1 0.295281320810318 experiment 0.941415285392393 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57743560 chr17:57743540 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_39867 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57743460-57743540
64251 chr16 29912732 29912732 1 + G A UCEC 29912748 + 29912728 29912768 41 GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG GTGAACCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG < 41bp 1 0.623552462730191 1 0.459950357675552 experiment 0.752895074539618 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912748 chr16:29912732 nonsynonymous SNV 0.986 0 5 hm5C_associated_SNPs_39868 0 0 3 GRSF1 POSTAR2 ENCODE chr16:29912608-29912745
64251 chr1 10332308 10332308 1 + A G UCEC 10332306 + 10332286 10332326 41 GTATTTATTTTAGGAAGGAGCAAATATTAATAAGTCTCTTA GTATTTATTTTAGGAAGGAGCAGATATTAATAAGTCTCTTA < 41bp 1 0.0605178372396724 1 0.376817852258682 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10332306 chr1:10332308 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_39870 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:10332291-10332312
64251 chr16 68331170 68331170 1 + T G UCEC 68331160 + 68331140 68331180 41 CTATCACCAGAGGCACCCAGCAGCTTTGCTTTTGTGTCCTG CTATCACCAGAGGCACCCAGCAGCTTTGCTGTTGTGTCCTG < 41bp 1 0.48689899649779 1 0.509121537208557 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68331160 chr16:68331170 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_39871 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:68331160-68331180
64251 chr15 64410388 64410388 1 + C A UCEC 64410406 + 64410386 64410426 41 TTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC TTATCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC < 41bp 1 0.227124900198793 1 0.223765730857849 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410406 chr15:64410388 nonsynonymous SNV 0.968 1 3 hm5C_associated_SNPs_39873 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:64410372-64410400
64251 chr2 99938453 99938453 1 - T A UCEC 99938444 - 99938424 99938464 41 GAAACTTTAGAATGGAGGCTCGGTTCTTCTGACATTCTTAA GAAACTTTAGATTGGAGGCTCGGTTCTTCTGACATTCTTAA < 41bp 1 0.237400649874581 1 0.0859892964363098 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TXNDC9 ENSG00000115514 CDS Human protein_coding chr2:99938444 chr2:99938453 nonsynonymous SNV 0.997 4 12 hm5C_associated_SNPs_39874 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:99938422-99938453
64251 chr16 2811602 2811602 1 + G A UCEC 2811603 + 2811583 2811623 41 CCCTCTCCGGAAAGGAGCAGCACAGGCCCAGAACCACCTGC CCCTCTCCGGAAAGGAGCAACACAGGCCCAGAACCACCTGC < 41bp 1 0.465420282723104 1 0.596922278404236 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811603 chr16:2811602 nonsynonymous SNV 0.994 0 20 hm5C_associated_SNPs_39875 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2811600-2811620
64251 chr7 135312785 135312785 1 + C A UCEC 135312770 + 135312750 135312790 41 TCATCCCTACCCCAGTGGATCGCTACCGCCAGATTCTCCTC TCATCCCTACCCCAGTGGATCGCTACCGCCAGATTATCCTC < 41bp 1 0.454079274263536 1 0.129653722047806 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312770 chr7:135312785 nonsynonymous SNV 0.995 4 36 hm5C_associated_SNPs_39878 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr7:135312757-135312802
64251 chr16 31087727 31087727 1 + G T UCEC 31087730 + 31087710 31087750 41 AGCTCTCTCGGCACCGAGAACTGCTCCATCCATCTCCCAAC AGCTCTCTCGGCACCGATAACTGCTCCATCCATCTCCCAAC < 41bp 1 0.411591676199973 1 0.079298347234726 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31087730 chr16:31087727 stopgain 0.997 0 18 hm5C_associated_SNPs_39879 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:31087720-31087752
64251 chr2 60987393 60987393 1 + T G UCEC 60987390 + 60987370 60987410 41 AATTAATTGACGCCATGAAACCATTTGGAGTGTTTGAAGAT AATTAATTGACGCCATGAAACCAGTTGGAGTGTTTGAAGAT < 41bp 1 0.290536339566244 1 0.211196959018707 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLG ENSG00000115421 CDS Human protein_coding chr2:60987390 chr2:60987393 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_39880 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:60987377-60987429
64251 chr22 31485788 31485788 1 + G A UCEC 31485804 + 31485784 31485824 41 CTGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC CTGCAAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC < 41bp 1 0.1805293862185 1 0.0975070595741272 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMTN ENSG00000183963 CDS Human protein_coding chr22:31485804 chr22:31485788 nonsynonymous SNV 0.190 3 5 hm5C_associated_SNPs_39881 0 0 3 GRWD1 POSTAR2 ENCODE chr22:31485705-31485839
64251 chrX 69699063 69699063 1 + G A UCEC 69699058 + 69699038 69699078 41 GAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTC GAACAAATGATGAACAGCAGCATGAACTCTGGGTCTGGGTC < 41bp 1 0.351438557572926 1 0.314038217067719 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DLG3 ENSG00000082458 CDS Human protein_coding chrX:69699058 chrX:69699063 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_39882 2 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:69699059-69699084
64251 chr20 31021481 31021481 1 + C T UCEC 31021472 + 31021452 31021492 41 AGTCTGTGGCTTCTCGGATCCAGGCTGAGCCAGACAACTTG AGTCTGTGGCTTCTCGGATCCAGGCTGAGTCAGACAACTTG < 41bp 1 0.587176666491593 1 0.480142533779144 experiment 0.825646667016813 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021472 chr20:31021481 nonsynonymous SNV 0.011 0 30 hm5C_associated_SNPs_39883 0 0 9 DDX24 POSTAR2 ENCODE chr20:31021451-31021484
64251 chr15 43632484 43632484 1 + G T UCEC 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC AGATGTCATAAAATAATTTGCAGATGACGGCGTCAAGTACC < 41bp 1 0.426643839627595 1 0.53181117773056 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632484 stopgain 1.000 1 14 hm5C_associated_SNPs_39884 0 0 2 DDX24 POSTAR2 ENCODE chr15:43632468-43632527
64251 chr13 113732686 113732686 1 + G A UCEC 113732702 + 113732682 113732722 41 CGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCT CGGCAAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCT < 41bp 1 0.310461294985887 1 0.409554779529572 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113732702 chr13:113732686 nonsynonymous SNV 0.096 2 5 hm5C_associated_SNPs_39885 0 0 3 BUD13 POSTAR2 ENCODE chr13:113732629-113732725
64251 chr15 91448699 91448699 1 + G T UCEC 91448697 + 91448677 91448717 41 CCATCTCCCCGCAGGACTGCCAGTTTGCTTTGGGGGGCCGG CCATCTCCCCGCAGGACTGCCATTTTGCTTTGGGGGGCCGG < 41bp 1 0.0719303220142403 1 0.0620226860046387 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91448697 chr15:91448699 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_39886 0 0 5 DDX24 POSTAR2 ENCODE chr15:91448682-91448738
64251 chr17 40985593 40985593 1 + C A UCEC 40985592 + 40985572 40985612 41 TCAGGTCCCTCCGGCCCCCTCCCTGGAGTCCACAGCGCCTC TCAGGTCCCTCCGGCCCCCTCACTGGAGTCCACAGCGCCTC < 41bp 1 0.683369593857527 1 0.274249255657196 experiment 0.633260812284945 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSME3 ENSG00000131467 UTR5 Human protein_coding chr17:40985592 chr17:40985593 . . 0 22 hm5C_associated_SNPs_39887 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40985562-40985600
64251 chr11 34969146 34969146 1 + A C UCEC 34969143 + 34969123 34969163 41 AAGTGATGATGGAATCTTGGCCAAAATCGTGGTAAGTTTTT AAGTGATGATGGAATCTTGGCCACAATCGTGGTAAGTTTTT < 41bp 1 0.208838957133369 1 0.0735926032066345 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969143 chr11:34969146 nonsynonymous SNV 0.971 3 24 hm5C_associated_SNPs_39888 0 0 2 PRPF8 POSTAR2 ENCODE chr11:34969140-34969179
64251 chr11 34969146 34969146 1 + A C UCEC 34969150 + 34969130 34969170 41 GATGGAATCTTGGCCAAAATCGTGGTAAGTTTTTATTTTAA GATGGAATCTTGGCCACAATCGTGGTAAGTTTTTATTTTAA < 41bp 1 0.663463223585425 1 0.939945220947266 experiment 0.673073552829151 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PDHX ENSG00000110435 CDS Human protein_coding chr11:34969150 chr11:34969146 nonsynonymous SNV 0.971 3 17 hm5C_associated_SNPs_39889 0 0 2 PRPF8 POSTAR2 ENCODE chr11:34969140-34969179
64251 chr3 141595722 141595722 1 + G T UCEC 141595736 + 141595716 141595756 41 ACCGGAGAATTCCTGGGGCGCACCGCCAAGAGCTGGGGTGA ACCGGATAATTCCTGGGGCGCACCGCCAAGAGCTGGGGTGA < 41bp 1 0.637788948470541 1 0.120325952768326 experiment 0.724422103058918 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141595736 chr3:141595722 stopgain 0.419 1 7 hm5C_associated_SNPs_39890 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:141595676-141595722
64251 chr10 127529842 127529842 1 + G T UCEC 127529827 + 127529807 127529847 41 TGCTTCTATTCCGGCAGGAGCAGGGAAAACCTGAGGTGCTT TGCTTCTATTCCGGCAGGAGCAGGGAAAACCTGAGTTGCTT < 41bp 1 0.782650060989896 1 0.846566498279572 experiment 0.434699878020209 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCCIP ENSG00000107949 CDS Human protein_coding chr10:127529827 chr10:127529842 nonsynonymous SNV 0.000 0 36 hm5C_associated_SNPs_39891 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:127529820-127529860
64251 chr10 106019443 106019443 1 + G A UCEC 106019431 + 106019411 106019451 41 TTCTGGAAAACAGTCAGGGTCAGCTGATCTACGAGTCTGCC TTCTGGAAAACAGTCAGGGTCAGCTGATCTACAAGTCTGCC < 41bp 1 0.515871199453461 1 0.106287270784378 experiment 0.968257601093078 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106019431 chr10:106019443 nonsynonymous SNV 0.704 4 33 hm5C_associated_SNPs_39892 0 0 5 GRWD1 POSTAR2 ENCODE chr10:106019437-106019552
64251 chr15 64429083 64429083 1 + G T UCEC 64429070 + 64429050 64429090 41 TGTCTCCTAGAAAGAGAAATCCAAGGACTTCAAGAACCACG TGTCTCCTAGAAAGAGAAATCCAAGGACTTCAATAACCACG < 41bp 1 0.155170613254055 1 0.377209514379501 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64429070 chr15:64429083 nonsynonymous SNV 0.992 3 34 hm5C_associated_SNPs_39893 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:64429056-64429086
64251 chr1 233489679 233489679 1 + G A UCEC 233489675 + 233489655 233489695 41 GCCCATTCCATCCACCTGCCCTGAGCCGTTTGCCAAGCTCA GCCCATTCCATCCACCTGCCCTGAACCGTTTGCCAAGCTCA < 41bp 1 0.478900253403973 1 0.197426319122314 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233489675 chr1:233489679 synonymous SNV . 0 25 hm5C_associated_SNPs_39894 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:233489658-233489681
64251 chr5 132427048 132427048 1 + G A UCEC 132427041 + 132427021 132427061 41 AAATGAGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGG AAATGAGGAGCCAATGGAAACAGATCAAAATGCAAAGGAGG < 41bp 1 0.288227594805381 1 0.550541460514069 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427041 chr5:132427048 synonymous SNV . 0 28 hm5C_associated_SNPs_39895 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427048 132427048 1 + G A UCEC 132427046 + 132427026 132427066 41 AGGAGCCAATGGAAACAGATCAGAATGCAAAGGAGGAAGAG AGGAGCCAATGGAAACAGATCAAAATGCAAAGGAGGAAGAG < 41bp 1 0.610801574231271 1 0.221104562282562 experiment 0.778396851537458 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427046 chr5:132427048 synonymous SNV . 0 23 hm5C_associated_SNPs_39896 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr5 132427048 132427048 1 + G A UCEC 132427053 + 132427033 132427073 41 AATGGAAACAGATCAGAATGCAAAGGAGGAAGAGGTAATCT AATGGAAACAGATCAAAATGCAAAGGAGGAAGAGGTAATCT < 41bp 1 0.545325330821503 1 0.330204725265503 experiment 0.909349338356994 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132427053 chr5:132427048 synonymous SNV . 0 16 hm5C_associated_SNPs_39897 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132426901-132427059
64251 chr10 120867630 120867630 1 + T C UCEC 120867616 + 120867596 120867636 41 CCCTTTGTCTTTGGTCAGTACAGAAGAACATGGTTTTATAT CCCTTTGTCTTTGGTCAGTACAGAAGAACATGGTCTTATAT < 41bp 1 0.674608654515212 1 0.449964940547943 experiment 0.650782690969576 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control FAM45A ENSG00000119979 CDS Human protein_coding chr10:120867616 chr10:120867630 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_39898 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:120867628-120867645
64251 chr1 26142120 26142120 1 + T G UCEC 26142138 + 26142118 26142158 41 TCTCATCCACCTTTGAAGACCCGTCCACGGCCACCTACATG TCGCATCCACCTTTGAAGACCCGTCCACGGCCACCTACATG < 41bp 1 0.0222194605834183 1 0.153045922517776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26142138 chr1:26142120 nonsynonymous SNV 0.998 1 3 hm5C_associated_SNPs_39899 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26142095-26142129
64251 chr2 233656064 233656064 1 + A C UCEC 233656051 + 233656031 233656071 41 ATCAGTCTCAGGAAGCATCACAGTTTGAGAGGAAAGATGAA ATCAGTCTCAGGAAGCATCACAGTTTGAGAGGACAGATGAA < 41bp 1 0.180529232049735 1 0.382205903530121 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233656051 chr2:233656064 nonsynonymous SNV 0.896 1 34 hm5C_associated_SNPs_39902 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:233656048-233656085
64251 chr19 17627005 17627005 1 + G A UCEC 17626993 + 17626973 17627013 41 TGGCTGCAGACGCATCTTCTCTCCAGACTGCCGATCCCAGA TGGCTGCAGACGCATCTTCTCTCCAGACTGCCAATCCCAGA < 41bp 1 0.784859347491117 1 0.873679161071777 experiment 0.430281305017767 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGLS ENSG00000130313 CDS Human protein_coding chr19:17626993 chr19:17627005 synonymous SNV . 0 33 hm5C_associated_SNPs_39903 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:17626986-17627010
64251 chr17 65905780 65905780 1 + T G UCEC 65905785 + 65905765 65905805 41 AATAAAAATAGAGCCTGATTCTGAAAAAGATGAGGTAAAAG AATAAAAATAGAGCCGGATTCTGAAAAAGATGAGGTAAAAG < 41bp 1 0.453185524334119 1 0.577202260494232 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65905785 chr17:65905780 synonymous SNV . 0 16 hm5C_associated_SNPs_39904 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65905764-65905781
64251 chrX 51641229 51641229 1 + C T UCEC 51641235 + 51641215 51641255 41 AAGACACACCCAAGCTCGGTCTCCTCTTGGTGATTCTGGGT AAGACACACCCAAGTTCGGTCTCCTCTTGGTGATTCTGGGT < 41bp 1 0.1811170944123 1 0.459330290555954 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51641235 chrX:51641229 nonsynonymous SNV 0.998 2 15 hm5C_associated_SNPs_39905 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:51641229-51641253
64251 chr17 78310129 78310129 1 + A G UCEC 78310125 + 78310105 78310145 41 TCAGTGCATTCATGAAGCATCTGAAAAAGCTGTGGAAGGCT TCAGTGCATTCATGAAGCATCTGAGAAAGCTGTGGAAGGCT < 41bp 1 0.107078227150972 1 0.186830013990402 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78310125 chr17:78310129 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_39906 0 0 14 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:78310120-78310140
64251 chr9 100757060 100757060 1 + A C UCEC 100757048 + 100757028 100757068 41 TTTCAAATCTCCCCAAGCTGCCTAAATTGAAAAAGGTAAGT TTTCAAATCTCCCCAAGCTGCCTAAATTGAAACAGGTAAGT < 41bp 1 0.111137039260412 1 0.0589461326599121 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100757048 chr9:100757060 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_39910 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100757048-100757078
64251 chr4 126398357 126398357 1 + C A UCEC 126398352 + 126398332 126398372 41 AGAGTTACAGTTGGAGGTATCAGATCTCTAGAACCAATCCT AGAGTTACAGTTGGAGGTATCAGATATCTAGAACCAATCCT < 41bp 1 0.166433794247138 1 0.839367628097534 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAT4 ENSG00000196159 CDS Human protein_coding chr4:126398352 chr4:126398357 nonsynonymous SNV 0.069 2 26 hm5C_associated_SNPs_39911 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr4:126398325-126398361
64251 chr2 242683190 242683190 1 + G A UCEC 242683180 + 242683160 242683200 41 CAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCA CAACCAACGCTGGAGGCCTGCGGTTTCTTCAATATGGCTCA < 41bp 1 0.372711450499031 1 0.672147452831268 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242683180 chr2:242683190 nonsynonymous SNV 0.081 3 31 hm5C_associated_SNPs_39912 0 0 3 PPIG POSTAR2 ENCODE chr2:242683182-242683232
64251 chr8 28906493 28906493 1 + T C UCEC 28906477 + 28906457 28906497 41 TGCTTTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGA TGCTTTTTTCGAAGAAGCAGCAATCCTGGAGAGTCACGGGA < 41bp 1 0.047713749842657 1 0.141338497400284 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906477 chr8:28906493 synonymous SNV . 0 37 hm5C_associated_SNPs_39913 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr8 28906493 28906493 1 + T C UCEC 28906481 + 28906461 28906501 41 TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGATAGA TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCACGGGATAGA < 41bp 1 0.247863487470555 1 0.752012133598328 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906481 chr8:28906493 synonymous SNV . 0 33 hm5C_associated_SNPs_39914 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr8 28906493 28906493 1 + T C UCEC 28906512 + 28906492 28906532 41 ATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT ACGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT < 41bp 1 0.558082188388269 1 0.458048641681671 experiment 0.883835623223462 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906512 chr8:28906493 synonymous SNV . 0 2 hm5C_associated_SNPs_39915 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr12 104720158 104720158 1 + A C UCEC 104720169 + 104720149 104720189 41 GCTTGCACAAGAAAAATTGGCTTAGAAACCGTAGGGGTGAA GCTTGCACACGAAAAATTGGCTTAGAAACCGTAGGGGTGAA < 41bp 1 0.218456280853818 1 0.0522008240222931 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720169 chr12:104720158 synonymous SNV . 0 10 hm5C_associated_SNPs_39916 0 0 6 HNRNPU POSTAR2 GSE34491,GSM850170 chr12:104720140-104720160
64251 chr7 55259436 55259436 1 + C T UCEC 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACCGTTGCTTGGTGCACCGCGA < 41bp 1 0.109450323090619 1 0.29468047618866 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259436 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_39917 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr7 139094332 139094332 1 + G T UCEC 139094319 + 139094299 139094339 41 TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGAAAAGAA TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGATAAAAGAA < 41bp 1 0.481540293517625 1 0.214548647403717 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094319 chr7:139094332 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_39918 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094332 139094332 1 + G T UCEC 139094341 + 139094321 139094361 41 GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG GAGAAGCAGGATAAAAGAAACCAGGAACGGCTGAAACGAAG < 41bp 1 0.396196685411891 1 0.342038631439209 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094341 chr7:139094332 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_39919 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094332 139094332 1 + G T UCEC 139094348 + 139094328 139094368 41 AGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG AGGATAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG < 41bp 1 0.477862129538113 1 0.331618845462799 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094348 chr7:139094332 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_39920 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094332 139094332 1 + G T UCEC 139094351 + 139094331 139094371 41 AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA ATAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA < 41bp 1 0.51222191901749 1 0.436938643455505 experiment 0.975556161965021 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094351 chr7:139094332 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_39921 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr4 1955184 1955184 1 + C T UCEC 1955190 + 1955170 1955210 41 GAGAGCCGAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAG GAGAGCCGAGGTTTTCGCTGCCCCCTCCACAGCTGTGTGAG < 41bp 1 0.0801534372392749 1 0.097093790769577 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1955190 chr4:1955184 synonymous SNV . 0 15 hm5C_associated_SNPs_39923 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:1955127-1955191
64251 chr4 1955184 1955184 1 + C T UCEC 1955199 + 1955179 1955219 41 GGTTTCCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGC GGTTTTCGCTGCCCCCTCCACAGCTGTGTGAGCTGCCATGC < 41bp 1 0.665492206637195 1 0.21914342045784 experiment 0.669015586725609 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1955199 chr4:1955184 synonymous SNV . 0 6 hm5C_associated_SNPs_39924 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:1955127-1955191
64251 chr1 32502610 32502610 1 + C T UCEC 32502598 + 32502578 32502618 41 CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCTGGGGAGCT < 41bp 1 0.585556438381511 1 0.420644879341125 experiment 0.828887123236978 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502598 chr1:32502610 nonsynonymous SNV 0.954 1 33 hm5C_associated_SNPs_39925 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32502558-32502614
64251 chr11 120099614 120099614 1 + C A UCEC 120099596 + 120099576 120099616 41 GGTGTGGACAGTTCTGTGTTCGAGGCTCTGCCCAAGGCCTC GGTGTGGACAGTTCTGTGTTCGAGGCTCTGCCCAAGGCATC < 41bp 1 0.780206028578593 1 0.8901287317276 experiment 0.439587942842814 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OAF ENSG00000184232 CDS Human protein_coding chr11:120099596 chr11:120099614 synonymous SNV . 0 39 hm5C_associated_SNPs_39927 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:120099613-120099614
64251 chr17 14095347 14095347 1 + C T UCEC 14095330 + 14095310 14095350 41 TTGCTAGCTGTGTCCTTTGCCACTTGTTGTGCTGTTCCGGG TTGCTAGCTGTGTCCTTTGCCACTTGTTGTGCTGTTCTGGG < 41bp 1 0.319817849283682 1 0.831805825233459 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control COX10 ENSG00000006695 CDS Human protein_coding chr17:14095330 chr17:14095347 nonsynonymous SNV 0.544 2 38 hm5C_associated_SNPs_39928 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:14095331-14095361
64251 chr1 116206829 116206829 1 + C T UCEC 116206847 + 116206827 116206867 41 CACGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCCGCT CATGCTGCAGGTGGTCCGCTCCACCGATGGCGAGTCCCGCT < 41bp 1 0.226337092335943 1 0.079109400510788 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VANGL1 ENSG00000173218 CDS Human protein_coding chr1:116206847 chr1:116206829 nonsynonymous SNV 0.957 2 3 hm5C_associated_SNPs_39929 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:116206792-116206839
64251 chr1 183086474 183086474 1 + G A UCEC 183086473 + 183086453 183086493 41 AGATGAGGATGGGTGGCGTGCGGAACAGAGAGATGGCTCTG AGATGAGGATGGGTGGCGTGCAGAACAGAGAGATGGCTCTG < 41bp 1 0.713075106758926 1 0.709771513938904 experiment 0.573849786482147 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183086473 chr1:183086474 synonymous SNV . 0 22 hm5C_associated_SNPs_39930 0 0 2 SND1 POSTAR2 ENCODE chr1:183086460-183086481
64251 chr19 36212464 36212464 1 + C T UCEC 36212461 + 36212441 36212481 41 CACAGACACAGGCTCAGCTACTGCAGCCCCTGCAGGCCTTG CACAGACACAGGCTCAGCTACTGTAGCCCCTGCAGGCCTTG < 41bp 1 0.258948197482849 1 0.118854194879532 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36212461 chr19:36212464 stopgain 0.996 0 24 hm5C_associated_SNPs_39932 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36212434-36212466
64251 chr2 113322018 113322018 1 + T A UCEC 113321998 + 113321978 113322018 41 TACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGT TACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGA < 41bp 1 0.161344731078832 1 0.414184749126434 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321998 chr2:113322018 nonsynonymous SNV 0.997 2 41 hm5C_associated_SNPs_39934 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr2 113322018 113322018 1 + T A UCEC 113321999 + 113321979 113322019 41 ACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTT ACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGAT < 41bp 1 0.642519109240154 1 0.2641341984272 experiment 0.714961781519692 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113321999 chr2:113322018 nonsynonymous SNV 0.997 2 40 hm5C_associated_SNPs_39935 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113322000-113322020
64251 chr12 49666983 49666983 1 + C T UCEC 49666979 + 49666959 49666999 41 GGAGGTTGGAGCAGATAGTGCTGACGGAGAGGATGAGGGTG GGAGGTTGGAGCAGATAGTGCTGATGGAGAGGATGAGGGTG < 41bp 1 0.57818926261457 1 0.120628327131271 experiment 0.843621474770859 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666979 chr12:49666983 synonymous SNV . 0 25 hm5C_associated_SNPs_39937 0 0 40 TARDBP POSTAR2 DRA001158,DRS012387 chr12:49666873-49667072
64251 chr6 36442598 36442598 1 + A G UCEC 36442596 + 36442576 36442616 41 TGACTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA TGACTATGCCTCTCAGCCAGCAGATCTTCAGTTCCCTCACA < 41bp 1 0.262770669419617 1 0.688372850418091 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36442596 chr6:36442598 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_39939 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:36442575-36442613
64251 chr10 17271866 17271866 1 + C T UCEC 17271847 + 17271827 17271867 41 GAGCAGCTCAAGGGCCAAGGCAAGTCGCGCCTGGGGGACCT GAGCAGCTCAAGGGCCAAGGCAAGTCGCGCCTGGGGGACTT < 41bp 1 0.747393687016913 1 0.326681852340698 experiment 0.505212625966174 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271847 chr10:17271866 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_39941 0 0 22 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr10:17271827-17271872
64251 chr10 17271866 17271866 1 + C T UCEC 17271865 + 17271845 17271885 41 GGCAAGTCGCGCCTGGGGGACCTCTACGAGGAGGAGATGCG GGCAAGTCGCGCCTGGGGGACTTCTACGAGGAGGAGATGCG < 41bp 1 0.152451756228395 1 0.182117193937302 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17271865 chr10:17271866 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_39942 0 0 22 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr10:17271827-17271872
64251 chr10 135209683 135209683 1 + G A UCEC 135209670 + 135209650 135209690 41 TACCTTAATTTTGCCACATCCCACTTTCAGGCCGCAACCCT TACCTTAATTTTGCCACATCCCACTTTCAGGCCACAACCCT < 41bp 1 0.0760437695671427 1 0.177619963884354 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTG1 ENSG00000148824;ENSG00000254536 CDS Human other chr10:135209670 chr10:135209683 nonsynonymous SNV 0.996 0 34 hm5C_associated_SNPs_39943 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:135209677-135209703
64251 chr1 64095669 64095669 1 + G T UCEC 64095685 + 64095665 64095705 41 TGAAGAATATGCAGTTTGCCCTGACCTGAAAGTAGACCTTG TGAATAATATGCAGTTTGCCCTGACCTGAAAGTAGACCTTG < 41bp 1 0.209185813589553 1 0.0311912894248962 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PGM1 ENSG00000079739 CDS Human protein_coding chr1:64095685 chr1:64095669 stopgain 1.000 1 5 hm5C_associated_SNPs_39944 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:64095669-64095699
64251 chr1 109441605 109441605 1 + G A UCEC 109441598 + 109441578 109441618 41 ATTTCTTGGTGAATTTGAAACTGCCTCGGAATACTACAAGT ATTTCTTGGTGAATTTGAAACTGCCTCAGAATACTACAAGT < 41bp 1 0.283529249804509 1 0.344171106815338 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109441598 chr1:109441605 synonymous SNV . 0 28 hm5C_associated_SNPs_39945 0 0 1 FUS POSTAR2 SRX029328 chr1:109441594-109441617
64251 chr12 124144432 124144432 1 + C T UCEC 124144415 + 124144395 124144435 41 AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATCGAA AGTTCATGTTGACTACAGGGCTGCTTGCTTCTGTCATTGAA < 41bp 1 0.347777003365242 1 0.071196973323822 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144415 chr12:124144432 stopgain 1.000 1 38 hm5C_associated_SNPs_39946 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:124144401-124144434
64251 chr3 31621436 31621436 1 + C T UCEC 31621422 + 31621402 31621442 41 AACTTTTAGCGGCCTTACATCTATATCTACTTTCCTGCTTA AACTTTTAGCGGCCTTACATCTATATCTACTTTCTTGCTTA < 41bp 1 0.666332895189843 1 0.80219304561615 experiment 0.667334209620314 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STT3B ENSG00000163527 CDS Human protein_coding chr3:31621422 chr3:31621436 synonymous SNV . 0 35 hm5C_associated_SNPs_39947 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:31621397-31621445
64251 chr1 233514959 233514959 1 + G A UCEC 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGAACTGG < 41bp 1 0.274074170527611 1 0.0641431212425232 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514959 nonsynonymous SNV 0.289 4 36 hm5C_associated_SNPs_39948 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr6 31593337 31593337 1 + G A UCEC 31593332 + 31593312 31593352 41 GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC GTCATGATCCCCGGGGTGGGCTACAACCTTCAGGCCCACCC < 41bp 1 0.643198300717224 1 0.467625737190247 experiment 0.713603398565553 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593332 chr6:31593337 synonymous SNV . 0 26 hm5C_associated_SNPs_39949 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593346 + 31593326 31593366 41 GGTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTA GGTGGGCTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTA < 41bp 1 0.200009788502788 1 0.0725703537464142 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593346 chr6:31593337 synonymous SNV . 0 12 hm5C_associated_SNPs_39950 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593347 + 31593327 31593367 41 GTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTAC GTGGGCTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTAC < 41bp 1 0.146524113125069 1 0.0756620466709137 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593347 chr6:31593337 synonymous SNV . 0 11 hm5C_associated_SNPs_39951 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593348 + 31593328 31593368 41 TGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACC TGGGCTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTACC < 41bp 1 0.239399962358275 1 0.0508480072021484 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593348 chr6:31593337 synonymous SNV . 0 10 hm5C_associated_SNPs_39952 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593350 + 31593330 31593370 41 GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC GGCTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC < 41bp 1 0.528054435344127 1 0.31787121295929 experiment 0.943891129311746 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593350 chr6:31593337 synonymous SNV . 0 8 hm5C_associated_SNPs_39953 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG < 41bp 1 0.381488151554292 1 0.105764150619507 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593337 synonymous SNV . 0 7 hm5C_associated_SNPs_39954 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAACCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG < 41bp 1 0.346217782405377 1 0.179176479578018 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593337 synonymous SNV . 0 6 hm5C_associated_SNPs_39955 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr6 31593337 31593337 1 + G A UCEC 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAACCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA < 41bp 1 0.299685181702659 1 0.444451123476028 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593337 synonymous SNV . 0 5 hm5C_associated_SNPs_39956 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr12 110765494 110765494 1 + T G UCEC 110765502 + 110765482 110765522 41 AACTAGATGAATTTGGGGAACAGCTTTCCAAAGTCATCTCC AACTAGATGAATGTGGGGAACAGCTTTCCAAAGTCATCTCC < 41bp 1 0.388613708292636 1 0.304224729537964 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110765502 chr12:110765494 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_39957 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110765398-110765647
64251 chr19 41111046 41111046 1 + G T UCEC 41111043 + 41111023 41111063 41 GTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGGCCC GTTCTGCCAGTTGCACTCCTCGGTCGCCCGGCCCCCGGCCC < 41bp 1 0.526355766854163 1 0.842467546463013 experiment 0.947288466291673 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41111043 chr19:41111046 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_39959 0 0 3 FXR2 POSTAR2 ENCODE chr19:41111038-41111067
64251 chr2 55056509 55056509 1 + G T UCEC 55056514 + 55056494 55056534 41 ATGTATGCTTGTGAAGAAGGCTTTGCCACTGGTGGGCGAGA ATGTATGCTTGTGAATAAGGCTTTGCCACTGGTGGGCGAGA < 41bp 1 0.0345260221536628 1 0.0865615606307983 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML6 ENSG00000214595 CDS Human protein_coding chr2:55056514 chr2:55056509 stopgain 1.000 0 16 hm5C_associated_SNPs_39961 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:55056488-55056520
64251 chr10 122625211 122625211 1 + C T UCEC 122625218 + 122625198 122625238 41 AACTTTACGTGTTCGAAGATCTTATAATAACATTTTTACCA AACTTTACGTGTTTGAAGATCTTATAATAACATTTTTACCA < 41bp 1 0.0642153631101732 1 0.086569756269455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122625218 chr10:122625211 stopgain 0.999 1 14 hm5C_associated_SNPs_39962 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:122625163-122625216
64251 chr10 122625211 122625211 1 + C T UCEC 122625228 + 122625208 122625248 41 GTTCGAAGATCTTATAATAACATTTTTACCACTTCAAATGA GTTTGAAGATCTTATAATAACATTTTTACCACTTCAAATGA < 41bp 1 0.108403943708614 1 0.0874392986297607 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122625228 chr10:122625211 stopgain 0.999 1 4 hm5C_associated_SNPs_39963 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:122625163-122625216
64251 chr17 7160312 7160312 1 + G A UCEC 7160303 + 7160283 7160323 41 ACCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCT ACCCTGGGCGGTACCATGGGCCAGGCCTCAGCCCACATCCT < 41bp 1 0.464515427796405 1 0.199491888284683 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160303 chr17:7160312 synonymous SNV . 0 30 hm5C_associated_SNPs_39964 0 0 1 PPIG POSTAR2 ENCODE chr17:7160292-7160339
64251 chr17 7160312 7160312 1 + G A UCEC 7160304 + 7160284 7160324 41 CCCTGGGCGGTACCATGGGCCAGGCCTCGGCCCACATCCTG CCCTGGGCGGTACCATGGGCCAGGCCTCAGCCCACATCCTG < 41bp 1 0.706437323764336 1 0.843673706054688 experiment 0.587125352471329 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160304 chr17:7160312 synonymous SNV . 0 29 hm5C_associated_SNPs_39965 0 0 1 PPIG POSTAR2 ENCODE chr17:7160292-7160339
64251 chr17 7160312 7160312 1 + G A UCEC 7160314 + 7160294 7160334 41 TACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGC TACCATGGGCCAGGCCTCAGCCCACATCCTGTGTCGGAGGC < 41bp 1 0.307364594475444 1 0.568678677082062 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160314 chr17:7160312 synonymous SNV . 0 19 hm5C_associated_SNPs_39966 0 0 1 PPIG POSTAR2 ENCODE chr17:7160292-7160339
64251 chr17 7160312 7160312 1 + G A UCEC 7160315 + 7160295 7160335 41 ACCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCC ACCATGGGCCAGGCCTCAGCCCACATCCTGTGTCGGAGGCC < 41bp 1 0.631013727314452 1 0.666959524154663 experiment 0.737972545371096 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160315 chr17:7160312 synonymous SNV . 0 18 hm5C_associated_SNPs_39967 0 0 1 PPIG POSTAR2 ENCODE chr17:7160292-7160339
64251 chr17 7160312 7160312 1 + G A UCEC 7160316 + 7160296 7160336 41 CCATGGGCCAGGCCTCGGCCCACATCCTGTGTCGGAGGCCC CCATGGGCCAGGCCTCAGCCCACATCCTGTGTCGGAGGCCC < 41bp 1 0.426346359520165 1 0.242062509059906 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control ELP5 ENSG00000170291 CDS Human protein_coding chr17:7160316 chr17:7160312 synonymous SNV . 0 17 hm5C_associated_SNPs_39968 0 0 1 PPIG POSTAR2 ENCODE chr17:7160292-7160339
64251 chr7 157000233 157000233 1 + C T UCEC 157000240 + 157000220 157000260 41 ATAACGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT ATAACGAATTCTTTGGTGATCCCATAGAAGGTAAGGATTTT < 41bp 1 0.0413697956419609 1 0.112869411706924 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157000240 chr7:157000233 synonymous SNV . 0 14 hm5C_associated_SNPs_39969 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr7:157000154-157000246
64251 chr12 22214321 22214321 1 + G T UCEC 22214315 + 22214295 22214335 41 ACATTTATGTATCAGGAGACCAAAAAGAAATAATATCTTAT ACATTTATGTATCAGGAGACCAAAAATAAATAATATCTTAT < 41bp 1 0.419575696565756 1 0.421809434890747 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22214315 chr12:22214321 stopgain 1.000 1 27 hm5C_associated_SNPs_39970 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:22214299-22214322
64251 chrX 107842013 107842013 1 + G A UCEC 107842027 + 107842007 107842047 41 CCTATGGGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGG CCTATGAGTCCCCCTGGTTTCGGCCCTCCAGGCCCAGTAGG < 41bp 1 0.488512204820758 1 0.532953500747681 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107842027 chrX:107842013 nonsynonymous SNV 0.775 5 7 hm5C_associated_SNPs_39971 0 0 1 SND1 POSTAR2 ENCODE chrX:107841947-107842029
64251 chr2 118582183 118582183 1 + C T UCEC 118582181 + 118582161 118582201 41 GCTCTTTTCTGCCACCCAAACTCGAAAAGTTGAAGACCTGG GCTCTTTTCTGCCACCCAAACTTGAAAAGTTGAAGACCTGG < 41bp 1 0.668230153974341 1 0.248898893594742 experiment 0.663539692051319 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582181 chr2:118582183 stopgain 1.000 1 23 hm5C_associated_SNPs_39972 0 0 2 FASTKD2 POSTAR2 ENCODE chr2:118582137-118582189
64251 chr7 2406205 2406205 1 + G A UCEC 2406225 + 2406205 2406245 41 GCTTAGCATCTATGAAACTCCTGTAAGTGGCCTCAGTGATG ACTTAGCATCTATGAAACTCCTGTAAGTGGCCTCAGTGATG < 41bp 1 0.479297751873811 1 0.0820305943489075 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2406225 chr7:2406205 synonymous SNV . 0 1 hm5C_associated_SNPs_39973 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr7:2406165-2406212
64251 chr11 73075569 73075569 1 + T C UCEC 73075552 + 73075532 73075572 41 ACCTTGGGCACCCAGGGGAGCCCCATCACCAAGATGGTATC ACCTTGGGCACCCAGGGGAGCCCCATCACCAAGATGGCATC < 41bp 1 0.188409426044071 1 0.0581503510475159 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73075552 chr11:73075569 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_39975 0 0 5 CDC40 POSTAR2 ENCODE chr11:73075562-73075657
64251 chr5 54635872 54635872 1 + C T UCEC 54635889 + 54635869 54635909 41 CAGCGTGTAATATTTACCAGCCCAATTAAGGCTCTGAGTAA CAGTGTGTAATATTTACCAGCCCAATTAAGGCTCTGAGTAA < 41bp 1 0.337351330526221 1 0.296898245811462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54635889 chr5:54635872 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_39977 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:54635866-54635989
64251 chr15 42984681 42984681 1 + G A UCEC 42984694 + 42984674 42984714 41 CCAGGACGAACACATTCGAACAGGGCACACAGACCCTCGGC CCAGGACAAACACATTCGAACAGGGCACACAGACCCTCGGC < 41bp 1 0.516136517036149 1 0.932381749153137 experiment 0.967726965927702 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control STARD9 ENSG00000159433 CDS Human protein_coding chr15:42984694 chr15:42984681 synonymous SNV . 0 8 hm5C_associated_SNPs_39978 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:42984672-42984711
64251 chr5 43173452 43173452 1 + G T UCEC 43173455 + 43173435 43173475 41 AATGTCCAAATTGTCATGAACGATTTGCTAGAAATAGCACT AATGTCCAAATTGTCATTAACGATTTGCTAGAAATAGCACT < 41bp 1 0.158295522847456 1 0.149490505456924 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43173455 chr5:43173452 stopgain 1.000 1 18 hm5C_associated_SNPs_39979 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:43173433-43173469
64251 chr11 57574416 57574416 1 + G A UCEC 57574432 + 57574412 57574452 41 AAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC AAACAATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC < 41bp 1 0.655008385226158 1 0.411131262779236 experiment 0.689983229547683 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57574432 chr11:57574416 nonsynonymous SNV 0.994 3 5 hm5C_associated_SNPs_39980 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:57574392-57574417
64251 chr1 70716103 70716103 1 + G T UCEC 70716113 + 70716093 70716133 41 GGATGAAAGAGAACGATCAACAAGCAAGAAGAAGAAGAGTA GGATGAAAGATAACGATCAACAAGCAAGAAGAAGAAGAGTA < 41bp 1 0.457920416194403 1 0.247153460979462 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70716113 chr1:70716103 stopgain 0.998 1 11 hm5C_associated_SNPs_39981 0 0 38 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:70716040-70716160
64251 chr11 107968468 107968468 1 + G A UCEC 107968473 + 107968453 107968493 41 TTCTCAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA TTCTCAGTGAACCAGAAGTTCAGTTTAATGTAAGCTCGTTA < 41bp 1 0.240801651518644 1 0.0982439517974854 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968473 chr11:107968468 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_39982 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr9 124534954 124534954 1 + C T UCEC 124534965 + 124534945 124534985 41 TCACAAGGTCCTCCGGGGTCCAGCCCTCACCTGCCCGCAGC TCACAAGGTTCTCCGGGGTCCAGCCCTCACCTGCCCGCAGC < 41bp 1 0.247049882811912 1 0.188832968473434 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124534965 chr9:124534954 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_39983 0 0 2 RBM15 POSTAR2 ENCODE chr9:124534937-124534985
64251 chr1 10689618 10689618 1 + G A UCEC 10689614 + 10689594 10689634 41 GTTCCCTCCATCCCCATCAGCCCCGAAGATCCCCTCCTGGC GTTCCCTCCATCCCCATCAGCCCCAAAGATCCCCTCCTGGC < 41bp 1 0.437459326117455 1 0.0320783257484436 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689614 chr1:10689618 synonymous SNV . 0 25 hm5C_associated_SNPs_39984 0 0 1 SF3B4 POSTAR2 ENCODE chr1:10689524-10689641
64251 chr14 21967267 21967267 1 - A G UCEC 21967278 - 21967258 21967298 41 TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAACCA TAGTTTTTATTTCCTAGGTTCGTTCCACCAGCCATAAACCA < 41bp 1 0.0184371604590145 1 0.0443174839019775 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control METTL3 ENSG00000165819 CDS Human protein_coding chr14:21967278 chr14:21967267 synonymous SNV . 0 32 hm5C_associated_SNPs_39985 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221659 chr14:21967260-21967280
64251 chr19 36128138 36128138 1 + C T UCEC 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT GCCTTCAGCCGCTTCCTATCCTTCCTTAAGGCCAAGGTGAT < 41bp 1 0.212971706334154 1 0.464177012443542 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128138 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_39987 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36128087-36128139
64251 chr1 151633285 151633285 1 + C T UCEC 151633305 + 151633285 151633325 41 CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC TGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC < 41bp 1 0.336131794818876 1 0.223774641752243 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX27 ENSG00000143376 CDS Human protein_coding chr1:151633305 chr1:151633285 stopgain 1.000 1 1 hm5C_associated_SNPs_39988 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151633275-151633311
64251 chr10 115661458 115661458 1 + T C UCEC 115661457 + 115661437 115661477 41 AGGAACCTGCCTTAGGTTTGCTGGAAGTGGAAATGAAGAGA AGGAACCTGCCTTAGGTTTGCCGGAAGTGGAAATGAAGAGA < 41bp 1 0.634848362491766 1 0.56138813495636 experiment 0.730303275016468 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661457 chr10:115661458 synonymous SNV . 0 22 hm5C_associated_SNPs_40004 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr10:115661436-115661461
64251 chr7 65419154 65419154 1 + T C UCEC 65419170 + 65419150 65419190 41 TACTTTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC TACTCTGTGCTGAAGGAGTTCTGCATCATCTGCATCGTCAC < 41bp 1 0.799929872737852 1 0.815039873123169 experiment 0.400140254524295 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65419170 chr7:65419154 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_40005 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:65419104-65419176
64251 chr15 100215641 100215641 1 + T C UCEC 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC CACTACAGACCTCACAGTGCCAAACGGAGCTGGAAGCAGTC < 41bp 1 0.228056247851763 1 0.394102782011032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215641 synonymous SNV . 0 25 hm5C_associated_SNPs_40008 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr15:100215624-100215648
64251 chr6 32944207 32944207 1 + T C UCEC 32944227 + 32944207 32944247 41 TTACTGCAGCTCCTCCAGCCCAGCCCCTTGCCAAGGTATGA CTACTGCAGCTCCTCCAGCCCAGCCCCTTGCCAAGGTATGA < 41bp 1 0.299433056218877 1 0.153890311717987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944227 chr6:32944207 nonsynonymous SNV 0.985 1 1 hm5C_associated_SNPs_40009 0 0 36 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:32944049-32944224
64251 chr11 107966313 107966313 1 + C T UCEC 107966308 + 107966288 107966328 41 ATTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCA ATTTGGAGGTAACCACGTTTCAGCTTGCTGTATTGTTTGCA < 41bp 1 0.572668751561296 1 0.691697359085083 experiment 0.854662496877407 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107966308 chr11:107966313 synonymous SNV . 0 26 hm5C_associated_SNPs_40010 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:107966259-107966343
64251 chr7 101840398 101840398 1 + C T UCEC 101840378 + 101840358 101840398 41 TCGCCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATC TCGCCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATT < 41bp 1 0.122320387376358 1 0.0859610736370087 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101840378 chr7:101840398 synonymous SNV . 0 41 hm5C_associated_SNPs_40011 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:101840378-101840403
64251 chr17 33310496 33310496 1 + G A UCEC 33310485 + 33310465 33310505 41 AGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGGACCTCA AGAGCGGGCCCGGGCCACCACAAAAAAAATCAAGGACCTCA < 41bp 1 0.689880932357017 1 0.404021143913269 experiment 0.620238135285966 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310485 chr17:33310496 nonsynonymous SNV 0.989 4 32 hm5C_associated_SNPs_40013 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:33310478-33310516
64251 chr6 161470213 161470213 1 + C T UCEC 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATATTATTAATGAAATCCTTACTTTCAAAGTTGACTAT < 41bp 1 0.0627761989572843 1 0.0375246703624725 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470213 synonymous SNV . 0 35 hm5C_associated_SNPs_40015 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:161470193-161470220
64251 chr7 98591327 98591327 1 + G T UCEC 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCATCGTCGATCATATGGTCTGGTTCAGAGAA < 41bp 1 0.10495017516553 1 0.113931477069855 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591327 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_40016 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98591317-98591358
64251 chr7 70252238 70252238 1 + G T UCEC 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCGGCCACAAGGATGGCCCCAGTGTGCATAACTTTAGCA < 41bp 1 0.141753503900069 1 0.0702724158763885 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252238 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_40017 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:70252208-70252240
64251 chr19 4323369 4323369 1 + G A UCEC 4323383 + 4323363 4323403 41 ATGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG ATGCCCACACCAAACAAGTGCTGCACACTTTCAAGACCAGG < 41bp 1 0.35781160725152 1 0.149095118045807 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323383 chr19:4323369 nonsynonymous SNV 0.988 1 7 hm5C_associated_SNPs_40018 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4323342-4323387
64251 chr12 105543490 105543490 1 + G A UCEC 105543489 + 105543469 105543509 41 CCAGATTGATTAAAGATATTCGATTTTTCAGGGAAATTAAG CCAGATTGATTAAAGATATTCAATTTTTCAGGGAAATTAAG < 41bp 1 0.123908646380462 1 0.0995604395866394 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105543489 chr12:105543490 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_40020 0 0 6 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:105543472-105543501
64251 chr20 4679897 4679897 1 + C A UCEC 4679908 + 4679888 4679928 41 ATGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGGGCCT ATGCTGGTTATCTTTGTGGCCACATGGAGTGACCTGGGCCT < 41bp 1 0.571011221539479 1 0.581954121589661 experiment 0.857977556921041 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4679908 chr20:4679897 nonsynonymous SNV 0.778 2 10 hm5C_associated_SNPs_40021 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:4679876-4679898
64251 chr5 134099668 134099668 1 + G T UCEC 134099676 + 134099656 134099696 41 CCTCAGACAAAAGAAGTAAACGTGGAGATGACAGACGGTCT CCTCAGACAAAATAAGTAAACGTGGAGATGACAGACGGTCT < 41bp 1 0.707040126173564 1 0.575419545173645 experiment 0.585919747652871 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099676 chr5:134099668 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_40024 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:134099660-134099680
64251 chr5 134099668 134099668 1 + G T UCEC 134099687 + 134099667 134099707 41 AGAAGTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGA ATAAGTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGA < 41bp 1 0.514483960414667 1 0.222184270620346 experiment 0.971032079170667 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099687 chr5:134099668 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_40025 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:134099660-134099680
64251 chr17 41568616 41568616 1 + C T UCEC 41568607 + 41568587 41568627 41 TCCTTTGCCAACCGGACAACCCTTCTGTTCGGGTACTGATA TCCTTTGCCAACCGGACAACCCTTCTGTTTGGGTACTGATA < 41bp 1 0.0118775352970183 1 0.0409823954105377 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41568607 chr17:41568616 nonsynonymous SNV 0.893 2 30 hm5C_associated_SNPs_40028 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr17:41568593-41568616
64251 chr12 57906094 57906094 1 + G A UCEC 57906095 + 57906075 57906115 41 TCCTTGCTCAGCCCTAGGAGCTGAGGATAACTATACCTTGG TCCTTGCTCAGCCCTAGGAACTGAGGATAACTATACCTTGG < 41bp 1 0.572565905244711 1 0.365394949913025 experiment 0.854868189510578 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57906095 chr12:57906094 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_40029 0 0 19 FMR1 POSTAR2 GSE39682,GSM977615 chr12:57906049-57906131
64251 chr19 806421 806421 1 + G T UCEC 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG TAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG < 41bp 1 0.257539069584035 1 0.0422988831996918 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806421 synonymous SNV . 0 1 hm5C_associated_SNPs_40032 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr11 20385796 20385796 1 + G A UCEC 20385777 + 20385757 20385797 41 GGCATCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAGA GGCATCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAAA < 41bp 1 0.520623118292848 1 0.612832188606262 experiment 0.958753763414304 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20385777 chr11:20385796 nonsynonymous SNV 0.013 1 40 hm5C_associated_SNPs_40033 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:20385780-20385800
64251 chr11 20385796 20385796 1 + G A UCEC 20385778 + 20385758 20385798 41 GCATCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAGAA GCATCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAAAA < 41bp 1 0.462943591892416 1 0.497174769639969 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20385778 chr11:20385796 nonsynonymous SNV 0.013 1 39 hm5C_associated_SNPs_40034 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:20385780-20385800
64251 chr20 61575005 61575005 1 + G A UCEC 61575018 + 61574998 61575038 41 AGGAGTCGCCCTTCGGAGACCTCCTCCACACCATGCAGAGG AGGAGTCACCCTTCGGAGACCTCCTCCACACCATGCAGAGG < 41bp 1 0.427440708327658 1 0.307430386543274 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GID8 ENSG00000101193 CDS Human protein_coding chr20:61575018 chr20:61575005 synonymous SNV . 0 8 hm5C_associated_SNPs_40036 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:61574957-61575005
64251 chr14 71570328 71570328 1 + C A UCEC 71570324 + 71570304 71570344 41 AGCCACGAACAGCTTAAAGACATTCTTGGGGGTCCTATCAG AGCCACGAACAGCTTAAAGACATTATTGGGGGTCCTATCAG < 41bp 1 0.239958943128565 1 0.255856394767761 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71570324 chr14:71570328 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_40037 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr14:71570315-71570344
64251 chr3 196533551 196533551 1 + G A UCEC 196533533 + 196533513 196533553 41 ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACGAA ACTGCTCCTCCCGTTATTGCCCCGCGACCGGATCATACAAA < 41bp 1 0.453695482438596 1 0.489784121513367 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAK2 ENSG00000180370 CDS Human protein_coding chr3:196533533 chr3:196533551 synonymous SNV . 0 39 hm5C_associated_SNPs_40038 0 0 5 LIN28B POSTAR2 ENCODE chr3:196533497-196533553
64251 chr9 133760703 133760703 1 + G A UCEC 133760722 + 133760702 133760742 41 CGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT CAAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT < 41bp 1 0.0563875572097175 1 0.117209255695343 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760722 chr9:133760703 nonsynonymous SNV 0.994 4 2 hm5C_associated_SNPs_40039 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr1 22838390 22838390 1 + G A UCEC 22838392 + 22838372 22838412 41 TTCATCTGTAAGGCCTGCGACAAAAGCTTCCATTTCTACTG TTCATCTGTAAGGCCTGCAACAAAAGCTTCCATTTCTACTG < 41bp 1 0.525551357467585 1 0.274048686027527 experiment 0.948897285064831 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22838392 chr1:22838390 nonsynonymous SNV 0.997 1 19 hm5C_associated_SNPs_40040 0 0 2 ZNF622 POSTAR2 ENCODE chr1:22838373-22838421
64251 chr6 160212149 160212149 1 + T G UCEC 160212137 + 160212117 160212157 41 GGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTTCTGGCACA GGGCTGGCGGACGGTGTTTCCCTCCCGTGAGTGCTGGCACA < 41bp 1 0.222234280766632 1 0.145305037498474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212137 chr6:160212149 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_40041 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585673 chr6:160212130-160212152
64251 chr11 6631427 6631427 1 + G T UCEC 6631418 + 6631398 6631438 41 AGACACAAACAGACGCTCAGCAGACATGTGGAGTTTTGCAG AGACACAAACAGACGCTCAGCAGACATGTTGAGTTTTGCAG < 41bp 1 0.256743272419938 1 0.388672471046448 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631418 chr11:6631427 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_40042 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:6631402-6631440
64251 chr10 94757350 94757350 1 + C T UCEC 94757363 + 94757343 94757383 41 AGTTTAACTTAGATGTCATACAGTGTGAATGTAAGTACTAT AGTTTAATTTAGATGTCATACAGTGTGAATGTAAGTACTAT < 41bp 1 0.244474460861608 1 0.129523396492004 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC6 ENSG00000138190 CDS Human protein_coding chr10:94757363 chr10:94757350 synonymous SNV . 0 8 hm5C_associated_SNPs_40046 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94757318-94757357
64251 chr17 7813839 7813839 1 + G A UCEC 7813827 + 7813807 7813847 41 CACGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTCAGA CACGCTGTCCCGAATACCCCCCATCGCAGCCCACCTTCAGA < 41bp 1 0.0280082230926398 1 0.11658975481987 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7813827 chr17:7813839 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_40048 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr17:7813838-7813839
64251 chr17 7813839 7813839 1 + G A UCEC 7813828 + 7813808 7813848 41 ACGCTGTCCCGAATACCCCCCATCGCAGCCCGCCTTCAGAT ACGCTGTCCCGAATACCCCCCATCGCAGCCCACCTTCAGAT < 41bp 1 0.152258829152194 1 0.228510677814484 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7813828 chr17:7813839 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_40049 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr17:7813838-7813839
64251 chr17 7479998 7479998 1 + C T UCEC 7480007 + 7479987 7480027 41 ATATGCTTAACCGGAGATACCTGTGTGAGTAATTCGGTTCT ATATGCTTAACTGGAGATACCTGTGTGAGTAATTCGGTTCT < 41bp 1 0.438672626246826 1 0.0770598948001862 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480007 chr17:7479998 nonsynonymous SNV 0.910 2 12 hm5C_associated_SNPs_40052 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:7479863-7480009
64251 chr11 61111359 61111359 1 + C T UCEC 61111346 + 61111326 61111366 41 AGATGCTGAAACCACTGCAGCAGCCTGGCCTAACGTGGCTG AGATGCTGAAACCACTGCAGCAGCCTGGCCTAATGTGGCTG < 41bp 1 0.228883398146264 1 0.440920323133469 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61111346 chr11:61111359 synonymous SNV . 0 34 hm5C_associated_SNPs_40057 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:61111353-61111381
64251 chr19 11145710 11145710 1 + A G UCEC 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGGC < 41bp 1 0.687353102486787 1 0.717812418937683 experiment 0.625293795026427 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145710 nonsynonymous SNV 0.999 1 40 hm5C_associated_SNPs_40058 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145710 11145710 1 + A G UCEC 11145704 + 11145684 11145724 41 AGGACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAG AGGACGACGCGGAGGTGGAGCGGCTGGCCTGTGAGGAGGAG < 41bp 1 0.475516321985059 1 0.410296261310577 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145704 chr19:11145710 nonsynonymous SNV 0.999 1 27 hm5C_associated_SNPs_40059 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145710 11145710 1 + A G UCEC 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGGAGGTGGAGCGGCTGGCCTGTGAGGAGGAGGAG < 41bp 1 0.428856643081269 1 0.419997096061707 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145710 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_40060 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr6 160494428 160494428 1 + T C UCEC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAC < 41bp 1 0.390068324110585 1 0.901953816413879 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494428 nonsynonymous SNV 0.922 1 41 hm5C_associated_SNPs_40061 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:160494416-160494454
64251 chr19 10886489 10886489 1 + C T UCEC 10886497 + 10886477 10886517 41 CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAC CAGTTCATCAGCTGGGAGAGCAGCCTCATTCTGGCTGTCAC < 41bp 1 0.215418984123519 1 0.194492369890213 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886497 chr19:10886489 nonsynonymous SNV 0.998 5 13 hm5C_associated_SNPs_40062 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:10886460-10886494
64251 chr2 113260548 113260548 1 + G A UCEC 113260557 + 113260537 113260577 41 GGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATA GGGTGTGCTTCAGACTGCTTCAGAACCATATCATGTTGATA < 41bp 1 0.409576084781862 1 0.465059250593185 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113260557 chr2:113260548 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_40063 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:113260512-113260550
64251 chr10 75871772 75871772 1 + C T UCEC 75871762 + 75871742 75871782 41 GTCCCCCCTGACATGGAAGACGATTACGAACCTGAGCTGCT GTCCCCCCTGACATGGAAGACGATTACGAATCTGAGCTGCT < 41bp 1 0.0756876372355463 1 0.0946898758411407 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871762 chr10:75871772 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_40064 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:75871765-75871791
64251 chr17 2266367 2266367 1 + G A UCEC 2266362 + 2266342 2266382 41 CCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGG CCCTCTGCTGATGAGCTGGTCCAGCAGCACCGCATCCGGGG < 41bp 1 0.107439343208686 1 0.187005341053009 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266362 chr17:2266367 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_40066 0 0 5 GRWD1 POSTAR2 ENCODE chr17:2266319-2266416
64251 chr17 2266367 2266367 1 + G A UCEC 2266363 + 2266343 2266383 41 CCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGGT CCTCTGCTGATGAGCTGGTCCAGCAGCACCGCATCCGGGGT < 41bp 1 0.631597065896158 1 0.538245737552643 experiment 0.736805868207684 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266363 chr17:2266367 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_40067 0 0 5 GRWD1 POSTAR2 ENCODE chr17:2266319-2266416
64251 chr5 64881995 64881995 1 + C T UCEC 64881981 + 64881961 64882001 41 GGATCAAATACTAATGGATCCCAGTTTTTCATAACGGTAGT GGATCAAATACTAATGGATCCCAGTTTTTCATAATGGTAGT < 41bp 1 0.284693974171623 1 0.157161951065063 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64881981 chr5:64881995 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_40069 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:64881987-64882008
64251 chr11 129996710 129996710 1 + C T UCEC 129996707 + 129996687 129996727 41 GAGCAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGT GAGCAGCTGGAGATTCGGCACCGTAACCGAATGGACAGGGT < 41bp 1 0.244080379400953 1 0.0522349178791046 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996707 chr11:129996710 synonymous SNV . 0 24 hm5C_associated_SNPs_40071 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr5 33455750 33455750 1 + G T UCEC 33455756 + 33455736 33455776 41 AGAAAATCATTAAAGAAAAACAAGCTTTTGAAAGACTGGAA AGAAAATCATTAAATAAAAACAAGCTTTTGAAAGACTGGAA < 41bp 1 0.29407817291201 1 0.308154284954071 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33455756 chr5:33455750 stopgain 1.000 1 15 hm5C_associated_SNPs_40079 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:33455716-33455800
64251 chr9 131386726 131386726 1 + T C UCEC 131386723 + 131386703 131386743 41 CTGGATGAGAACTCGGCCTTCCTTCAGTTCAACTGGAAGGC CTGGATGAGAACTCGGCCTTCCTCCAGTTCAACTGGAAGGC < 41bp 1 0.0346695005411939 1 0.0874844491481781 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131386723 chr9:131386726 synonymous SNV . 0 24 hm5C_associated_SNPs_40082 0 0 8 RBM15 POSTAR2 GSE78030,GSM2064710 chr9:131386720-131386740
64251 chr9 96079886 96079886 1 + G A UCEC 96079899 + 96079879 96079919 41 CGGAGCCGCCCCGACCCTGTCCGTGCCCACACCAGGTACTG CGGAGCCACCCCGACCCTGTCCGTGCCCACACCAGGTACTG < 41bp 1 0.121240852865365 1 0.0741930305957794 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WNK2 ENSG00000165238 CDS Human protein_coding chr9:96079899 chr9:96079886 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_40084 0 0 2 BUD13 POSTAR2 ENCODE chr9:96079883-96079906
64251 chr20 60882657 60882657 1 + G A UCEC 60882662 + 60882642 60882682 41 CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCG CTCTTCGCAGCTCCCAGAGCCAGTCGGCAGCGGTCACCCCG < 41bp 1 0.309629708333714 1 0.570574700832367 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882662 chr20:60882657 nonsynonymous SNV 0.999 1 16 hm5C_associated_SNPs_40085 0 0 1 RPS3 POSTAR2 ENCODE chr20:60882655-60882667
64251 chr3 51980296 51980296 1 + T G UCEC 51980280 + 51980260 51980300 41 GCCATCCTCACTAGTGGGCTCCGCATCATGCCACATTCTGG GCCATCCTCACTAGTGGGCTCCGCATCATGCCACATGCTGG < 41bp 1 0.370370599579617 1 0.187888234853745 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PARP3 ENSG00000041880 CDS Human protein_coding chr3:51980280 chr3:51980296 nonsynonymous SNV 0.998 4 37 hm5C_associated_SNPs_40086 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:51980282-51980314
64251 chr18 33709906 33709906 1 + C T UCEC 33709886 + 33709866 33709906 41 CTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCAC CTCTTGTTTGTGCGGCTGACCAGTTGGCGACATGGTGGCAT < 41bp 1 0.51681892533867 1 0.546492040157318 experiment 0.96636214932266 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ELP2 ENSG00000134759 CDS Human protein_coding chr18:33709886 chr18:33709906 nonsynonymous SNV 0.029 0 41 hm5C_associated_SNPs_40087 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:33709870-33709917
64251 chr10 70525812 70525812 1 + G T UCEC 70525803 + 70525783 70525823 41 TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAAGA TTGAGTGTCCTATTGGACTACAGATTAGATGATAATAAAGA < 41bp 1 0.223302433390695 1 0.223011195659637 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70525803 chr10:70525812 nonsynonymous SNV 0.992 3 30 hm5C_associated_SNPs_40088 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70525699-70525836
64251 chr16 69356471 69356471 1 + C T UCEC 69356472 + 69356452 69356492 41 TTTGGTTTCAGGTCTGTGGCCCCTCTCGCACCAACCCCAGC TTTGGTTTCAGGTCTGTGGTCCCTCTCGCACCAACCCCAGC < 41bp 1 0.0617795465001522 1 0.0500263869762421 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS4A ENSG00000132612 CDS Human protein_coding chr16:69356472 chr16:69356471 synonymous SNV . 0 20 hm5C_associated_SNPs_40089 0 0 1 BUD13 POSTAR2 ENCODE chr16:69356458-69356500
64251 chr1 44134861 44134861 1 + G T UCEC 44134847 + 44134827 44134867 41 AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTG AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGATGATCTG < 41bp 1 0.26760088366288 1 0.026537150144577 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134847 chr1:44134861 nonsynonymous SNV 0.999 1 35 hm5C_associated_SNPs_40092 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr12 94563011 94563011 1 + C T UCEC 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTTTATGGCATCGTGGTAAT < 41bp 1 0.0701489142801134 1 0.0716464817523956 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563011 nonsynonymous SNV 0.999 3 32 hm5C_associated_SNPs_40093 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr2 198571396 198571396 1 + G A UCEC 198571398 + 198571378 198571418 41 CCTTCTGAGACCTACCCAGCCTTCTGCACTACCTGCTTCCC CCTTCTGAGACCTACCCAACCTTCTGCACTACCTGCTTCCC < 41bp 1 0.288819154098675 1 0.0215936601161957 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571398 chr2:198571396 nonsynonymous SNV 0.098 0 19 hm5C_associated_SNPs_40094 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:198571363-198571414
64251 chrX 135593877 135593877 1 + C T UCEC 135593870 + 135593850 135593890 41 AATATGCAGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAG AATATGCAGATGAAAAGGGGCTTGAAGTTGCTGATAAAAAG < 41bp 1 0.332831596397765 1 0.212898731231689 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593870 chrX:135593877 nonsynonymous SNV 0.276 1 28 hm5C_associated_SNPs_40098 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chrX 135593877 135593877 1 + C T UCEC 135593880 + 135593860 135593900 41 TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAG TGAAAAGGGGCTTGAAGTTGCTGATAAAAAGGCGGAAGAAG < 41bp 1 0.372425809511947 1 0.215542644262314 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593880 chrX:135593877 nonsynonymous SNV 0.276 1 18 hm5C_associated_SNPs_40099 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr1 145663165 145663165 1 + G T UCEC 145663167 + 145663147 145663187 41 GGTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTT GGTCTTTACTAGCTTTGGTGCCATTTGGATCACACGATGTT < 41bp 1 0.0238772200394217 1 0.0394192039966583 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663167 chr1:145663165 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_40100 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr1 145663165 145663165 1 + G T UCEC 145663168 + 145663148 145663188 41 GTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTTT GTCTTTACTAGCTTTGGTGCCATTTGGATCACACGATGTTT < 41bp 1 0.0351544792345624 1 0.0725966989994049 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF115 ENSG00000121848 CDS Human other chr1:145663168 chr1:145663165 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_40101 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr16 53504343 53504343 1 + A G UCEC 53504331 + 53504311 53504351 41 TGGAGGGATAACATTCTTCCCTGTCCAAGTCAATGTTGGGG TGGAGGGATAACATTCTTCCCTGTCCAAGTCAGTGTTGGGG < 41bp 1 0.114299992621982 1 0.246370166540146 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504331 chr16:53504343 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_40102 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:53504342-53504343
64251 chr3 183368419 183368419 1 + G T UCEC 183368408 + 183368388 183368428 41 GCTGTGCTCTCAGCCTGTAGCAGCTACTTCAGAGCTATGTT GCTGTGCTCTCAGCCTGTAGCAGCTACTTCATAGCTATGTT < 41bp 1 0.540101425064317 1 0.337709724903107 experiment 0.919797149871365 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368408 chr3:183368419 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_40104 0 0 3 FMR1 POSTAR2 ENCODE chr3:183368395-183368475
64251 chr12 46215259 46215259 1 + G T UCEC 46215264 + 46215244 46215284 41 GAGAAGACTGATAGAGACTTCGTTAAGGTAAATCATTTTAA GAGAAGACTGATAGATACTTCGTTAAGGTAAATCATTTTAA < 41bp 1 0.0979431004559117 1 0.261724412441254 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID2 ENSG00000189079 CDS Human protein_coding chr12:46215264 chr12:46215259 nonsynonymous SNV 0.998 3 16 hm5C_associated_SNPs_40106 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:46215224-46215260
64251 chr20 11900395 11900395 1 + C T UCEC 11900386 + 11900366 11900406 41 TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCGATGTT TATGTTTTAGCTGTTGGGAGCTCTGTGTTTCATGCGATGTT < 41bp 1 0.166129702972789 1 0.140085220336914 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11900386 chr20:11900395 synonymous SNV . 0 30 hm5C_associated_SNPs_40116 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:11900373-11900396
64251 chr2 233681725 233681725 1 + C T UCEC 233681710 + 233681690 233681730 41 AGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAACTTGCC AGGAAGAAGAAAGGAAAAGGCGAGAGGAAGAAGAATTTGCC < 41bp 1 0.767923399835655 1 0.814784169197083 experiment 0.464153200328691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681710 chr2:233681725 nonsynonymous SNV 0.997 3 36 hm5C_associated_SNPs_40117 0 0 16 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681725 233681725 1 + C T UCEC 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CGAGAGGAAGAAGAATTTGCCCGAAGGAAACAGGTATGTAT < 41bp 1 0.481206134770813 1 0.459880411624908 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681725 nonsynonymous SNV 0.997 3 16 hm5C_associated_SNPs_40118 0 0 16 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr6 34213045 34213045 1 + C T UCEC 34213033 + 34213013 34213053 41 GGGCTTTTGGTTTGGGGGCGCCCTCTCTGCTCCTTCACTGT GGGCTTTTGGTTTGGGGGCGCCCTCTCTGCTCTTTCACTGT < 41bp 1 0.0901860658521138 1 0.0503885447978973 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34213033 chr6:34213045 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_40119 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34213004-34213051
64251 chr6 34213045 34213045 1 + C T UCEC 34213050 + 34213030 34213070 41 GCGCCCTCTCTGCTCCTTCACTGTTCCCTCTGGCTTCCCAT GCGCCCTCTCTGCTCTTTCACTGTTCCCTCTGGCTTCCCAT < 41bp 1 0.419861968137392 1 0.0167401731014252 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34213050 chr6:34213045 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_40120 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34213004-34213051
64251 chr12 124239058 124239058 1 + T G UCEC 124239064 + 124239044 124239084 41 CTCCTACCTGAGGCTCTGGGCGCTTAGCCTGGCTCACGCAC CTCCTACCTGAGGCGCTGGGCGCTTAGCCTGGCTCACGCAC < 41bp 1 0.268632294776378 1 0.124184370040894 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239064 chr12:124239058 nonsynonymous SNV 1.000 5 15 hm5C_associated_SNPs_40121 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124239048-124239064
64251 chr18 77728114 77728114 1 + G T UCEC 77728106 + 77728086 77728126 41 TACTGGAAGAAATGGGAAATCGCATTGAGGACTTACAGAAG TACTGGAAGAAATGGGAAATCGCATTGATGACTTACAGAAG < 41bp 1 0.616302551027837 1 0.521259844303131 experiment 0.767394897944326 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 CDS Human protein_coding chr18:77728106 chr18:77728114 nonsynonymous SNV 0.952 0 29 hm5C_associated_SNPs_40122 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:77728080-77728115
64251 chr18 56402450 56402450 1 + G T UCEC 56402451 + 56402431 56402471 41 AAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTG AAGGTGTCAAGGAGCAGAATCTTTTGAAATCCAGCATTCTG < 41bp 1 0.0547226177479675 1 0.0518769323825836 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56402451 chr18:56402450 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_40124 0 0 4 BUD13 POSTAR2 ENCODE chr18:56402387-56402474
64251 chr2 184023083 184023083 1 + G T UCEC 184023063 + 184023043 184023083 41 TTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAG TTATCAATCTAAACTGCAGGCTCGGAAAGCCTTAAGCAAAT < 41bp 1 0.652845846351919 1 0.162805795669556 experiment 0.694308307296162 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP35 ENSG00000163002 CDS Human protein_coding chr2:184023063 chr2:184023083 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_40126 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:184023078-184023098
64251 chr21 45523384 45523384 1 + A G UCEC 45523376 + 45523356 45523396 41 CAAGTCCTGGTCATCCCCAGCCAAGATGACCACGTCCTGGA CAAGTCCTGGTCATCCCCAGCCAAGATGGCCACGTCCTGGA < 41bp 1 0.205769162588129 1 0.472665041685104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45523376 chr21:45523384 nonsynonymous SNV 0.995 3 29 hm5C_associated_SNPs_40127 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:45523374-45523395
64251 chr16 8722759 8722759 1 + C T UCEC 8722770 + 8722750 8722790 41 CCTCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGGCTG CCTCCAGGCTGGGACTGACACCACTGGCCAGGAAGTGGCTG < 41bp 1 0.298511673594301 1 0.0527163445949554 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722770 chr16:8722759 nonsynonymous SNV . 0 10 hm5C_associated_SNPs_40129 0 0 5 GRWD1 POSTAR2 ENCODE chr16:8722735-8722805
64251 chr12 95681492 95681492 1 + C T UCEC 95681481 + 95681461 95681501 41 ACTTGAAAAGCTTGTTTGTACTAAAGAAACACAAGAACTAG ACTTGAAAAGCTTGTTTGTACTAAAGAAACATAAGAACTAG < 41bp 1 0.76011304421592 1 0.273820400238037 experiment 0.47977391156816 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95681481 chr12:95681492 stopgain 1.000 0 32 hm5C_associated_SNPs_40130 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:95681451-95681516
64251 chr6 41557796 41557796 1 + C T UCEC 41557781 + 41557761 41557801 41 TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCCGCAGC TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCTGCAGC < 41bp 1 0.104260711400911 1 0.0252434313297272 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXP4 ENSG00000137166 CDS Human protein_coding chr6:41557781 chr6:41557796 synonymous SNV . 0 36 hm5C_associated_SNPs_40131 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:41557795-41557796
64251 chr2 29159811 29159811 1 + T C UCEC 29159809 + 29159789 29159829 41 TTACAAAGAGGTTACAAGGACATCCTAATAGGTAAGATTAA TTACAAAGAGGTTACAAGGACACCCTAATAGGTAAGATTAA < 41bp 1 0.261662633692441 1 0.124296277761459 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR43 ENSG00000163811 CDS Human protein_coding chr2:29159809 chr2:29159811 synonymous SNV . 0 23 hm5C_associated_SNPs_40132 0 0 13 EWSR1 POSTAR2 SRX029344 chr2:29159787-29159818
64251 chr9 140110248 140110248 1 + G T UCEC 140110236 + 140110216 140110256 41 TCCGAGCAGCCATCCAGGAGCGTGTGGCCCAGGGCCAGACT TCCGAGCAGCCATCCAGGAGCGTGTGGCCCAGTGCCAGACT < 41bp 1 0.301518292632173 1 0.101357489824295 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110236 chr9:140110248 nonsynonymous SNV 0.141 4 33 hm5C_associated_SNPs_40133 0 0 1 PPIG POSTAR2 ENCODE chr9:140110223-140110250
64251 chr1 29069431 29069431 1 + A G UCEC 29069427 + 29069407 29069447 41 TCTGCTGTTGGTAGCGGGTCCATTACTAGTAACATCGTGGC TCTGCTGTTGGTAGCGGGTCCATTGCTAGTAACATCGTGGC < 41bp 1 0.193172555232883 1 0.182891249656677 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069427 chr1:29069431 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_40135 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:29069420-29069440
64251 chr20 57246303 57246303 1 + T G UCEC 57246308 + 57246288 57246328 41 ATTGTACAGTCCATTTCTGACCTGAATGAAATATTCAGGGA ATTGTACAGTCCATTGCTGACCTGAATGAAATATTCAGGGA < 41bp 1 0.45662386186509 1 0.239635050296783 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control STX16 ENSG00000124222;ENSG00000254995 CDS Human other chr20:57246308 chr20:57246303 nonsynonymous SNV 0.991 0 16 hm5C_associated_SNPs_40136 0 0 25 FMR1 POSTAR2 GSE39682,GSM977615 chr20:57246245-57246303
64251 chr19 42397349 42397349 1 + A G UCEC 42397351 + 42397331 42397371 41 TCTTCCTCCTACAGACATACCATCTCTACCGACGAAGAAAA TCTTCCTCCTACAGACATGCCATCTCTACCGACGAAGAAAA < 41bp 1 0.0524307046500177 1 0.0263316929340363 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42397351 chr19:42397349 nonsynonymous SNV 0.982 5 19 hm5C_associated_SNPs_40137 0 0 6 BUD13 POSTAR2 ENCODE chr19:42397349-42397375
64251 chr7 73922436 73922436 1 + A G UCEC 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGCGCTGTGGCGTCCCCACCAACGGCTGCGGACC < 41bp 1 0.528574930707565 1 0.217045307159424 experiment 0.942850138584869 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922436 nonsynonymous SNV 0.996 4 17 hm5C_associated_SNPs_40138 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:73922410-73922438
64251 chr12 105538143 105538143 1 + C T UCEC 105538149 + 105538129 105538169 41 TAAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAA TAAAGCTGGATGACTGAAACCCTTTCAAAGTTGGCATGAAA < 41bp 1 0.0333409146007592 1 0.0591758787631989 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105538149 chr12:105538143 stopgain 0.999 1 15 hm5C_associated_SNPs_40139 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:105538107-105538167
64251 chr12 105538143 105538143 1 + C T UCEC 105538150 + 105538130 105538170 41 AAAGCTGGATGACCGAAACCCTTTCAAAGTTGGCATGAAAG AAAGCTGGATGACTGAAACCCTTTCAAAGTTGGCATGAAAG < 41bp 1 0.0466591902117794 1 0.107293397188187 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105538150 chr12:105538143 stopgain 0.999 1 14 hm5C_associated_SNPs_40140 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:105538107-105538167
64251 chr1 36029495 36029495 1 + C A UCEC 36029505 + 36029485 36029525 41 GGCCCGGCTCCTTAGCACCTCTCCAGGTAAGAACTGGGGAT GGCCCGGCTCATTAGCACCTCTCCAGGTAAGAACTGGGGAT < 41bp 1 0.687778670576834 1 0.880232572555542 experiment 0.624442658846332 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36029505 chr1:36029495 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_40141 0 0 2 PPIG POSTAR2 ENCODE chr1:36029402-36029496
64251 chr13 76415807 76415807 1 + G A UCEC 76415812 + 76415792 76415832 41 TGTCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAA TGTCTCTGACCACACAGGAGCCCTCTCTTGCCACCTGGGAA < 41bp 1 0.0342147753913531 1 0.0317053198814392 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415812 chr13:76415807 nonsynonymous SNV 0.888 1 16 hm5C_associated_SNPs_40142 0 0 1 GRWD1 POSTAR2 ENCODE chr13:76415761-76415881
64251 chr13 76415807 76415807 1 + G A UCEC 76415814 + 76415794 76415834 41 TCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAAGC TCTCTGACCACACAGGAGCCCTCTCTTGCCACCTGGGAAGC < 41bp 1 0.179581768525181 1 0.0847972333431244 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415814 chr13:76415807 nonsynonymous SNV 0.888 1 14 hm5C_associated_SNPs_40143 0 0 1 GRWD1 POSTAR2 ENCODE chr13:76415761-76415881
64251 chr20 60882682 60882682 1 + G A UCEC 60882662 + 60882642 60882682 41 CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCG CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCA < 41bp 1 0.321779065250465 1 0.704301416873932 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882662 chr20:60882682 synonymous SNV . 0 41 hm5C_associated_SNPs_40144 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:60882659-60882697
64251 chr15 42059336 42059336 1 + C T UCEC 42059348 + 42059328 42059368 41 TATAGCTGCCAAAGTTGGGTCAGTTGGACACAAAATGAACT TATAGCTGTCAAAGTTGGGTCAGTTGGACACAAAATGAACT < 41bp 1 0.0534308272011101 1 0.11468580365181 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42059348 chr15:42059336 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_40150 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:42059282-42059341
64251 chr5 137523077 137523077 1 + C T UCEC 137523065 + 137523045 137523085 41 CCTACGCTCACGGCGTTCCCCTTTACTCAAATCTGGGCCTT CCTACGCTCACGGCGTTCCCCTTTACTCAAATTTGGGCCTT < 41bp 1 0.514766379649864 1 0.163413375616074 experiment 0.970467240700272 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF20A ENSG00000112984 CDS Human protein_coding chr5:137523065 chr5:137523077 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_40151 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137523008-137523078
64251 chr20 48568664 48568664 1 + A G UCEC 48568680 + 48568660 48568700 41 CTCCATCATCGACCAGTGAGCAGAGTCCGTGCTTGCTATCT CTCCGTCATCGACCAGTGAGCAGAGTCCGTGCTTGCTATCT < 41bp 1 0.671450001913245 1 0.37074202299118 experiment 0.65709999617351 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF114 ENSG00000124226 CDS Human protein_coding chr20:48568680 chr20:48568664 nonsynonymous SNV 0.996 0 5 hm5C_associated_SNPs_40153 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:48568620-48568668
64251 chr9 131702890 131702890 1 + G T UCEC 131702887 + 131702867 131702907 41 TTGGCCTGCAGGTGGTGTGTCAAGAAGGATGGTCCGGGCCC TTGGCCTGCAGGTGGTGTGTCAATAAGGATGGTCCGGGCCC < 41bp 1 0.569634305249513 1 0.257389485836029 experiment 0.860731389500973 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control PHYHD1 ENSG00000175287 CDS Human protein_coding chr9:131702887 chr9:131702890 stopgain 0.995 4 24 hm5C_associated_SNPs_40154 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:131702890-131702906
64251 chr15 40509810 40509810 1 + G A UCEC 40509796 + 40509776 40509816 41 GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGT GTGCAGCTGGATGTTTTTACCCTCAGCGGCTTTCAGACTGT < 41bp 1 0.319752448807852 1 0.212749838829041 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509796 chr15:40509810 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_40155 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr15 40509810 40509810 1 + G A UCEC 40509802 + 40509782 40509822 41 CTGGATGTTTTTACCCTCAGCGGCTTTCGGACTGTACAGAT CTGGATGTTTTTACCCTCAGCGGCTTTCAGACTGTACAGAT < 41bp 1 0.361868208402856 1 0.305477678775787 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BUB1B ENSG00000156970;ENSG00000259288 CDS Human other chr15:40509802 chr15:40509810 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_40156 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr15:40509786-40509815
64251 chr2 32656066 32656066 1 + A C UCEC 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTCAACAAGACCAGCAGCAAAGGAGGCATCCTCAA < 41bp 1 0.273154978141963 1 0.157524734735489 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656066 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_40159 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr16 845775 845775 1 + G T UCEC 845778 + 845758 845798 41 GCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGC GCCGGGCCACGCCCCAGTCCCTGCTCCTCGATGCCCTCTGC < 41bp 1 0.508197945536747 1 0.0778591632843018 experiment 0.983604108926506 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845778 chr16:845775 nonsynonymous SNV 0.073 0 18 hm5C_associated_SNPs_40166 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:845748-845787
64251 chr5 71491696 71491696 1 + G T UCEC 71491699 + 71491679 71491719 41 CCTGAGGATCTAACCAAGGACTTTGAAGAGTTAAAGGCTGA CCTGAGGATCTAACCAATGACTTTGAAGAGTTAAAGGCTGA < 41bp 1 0.0869605550597178 1 0.134176045656204 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491699 chr5:71491696 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_40171 0 0 19 LIN28A POSTAR2 GSE44616,GSM1087848 chr5:71491667-71491709
64251 chr7 4796677 4796677 1 + G A UCEC 4796673 + 4796653 4796693 41 ACCGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCT ACCGTTACTTTATCAAAGTCCCACATTCCCAGGAGGAGCCT < 41bp 1 0.156235998057185 1 0.0429748892784119 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796673 chr7:4796677 nonsynonymous SNV 0.995 5 25 hm5C_associated_SNPs_40172 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr7:4796656-4796677
64251 chr1 42925456 42925456 1 + C A UCEC 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTGAGTCACGACAGTCATTTGTGTTTATTGTA < 41bp 1 0.0792299305147104 1 0.0510055124759674 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925456 synonymous SNV . 0 26 hm5C_associated_SNPs_40173 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr19 56190086 56190086 1 + C T UCEC 56190096 + 56190076 56190116 41 CGAGCAATGACCCCTGGGGCCCATCCAGCTCCCTCATGTCA CGAGCAATGATCCCTGGGGCCCATCCAGCTCCCTCATGTCA < 41bp 1 0.0250841193953442 1 0.014331042766571 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EPN1 ENSG00000063245 CDS Human protein_coding chr19:56190096 chr19:56190086 synonymous SNV . 0 11 hm5C_associated_SNPs_40174 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:56190079-56190113
64251 chr4 148555336 148555336 1 + A G UCEC 148555322 + 148555302 148555342 41 GAAAACTTTATATTAAAGGACGGACAGTCAGGGGACATCCC GAAAACTTTATATTAAAGGACGGACAGTCAGGGGGCATCCC < 41bp 1 0.158031150842796 1 0.0805226266384125 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555322 chr4:148555336 synonymous SNV . 0 35 hm5C_associated_SNPs_40176 0 0 1 BUD13 POSTAR2 ENCODE chr4:148555262-148555341
64251 chr7 100478970 100478970 1 + C T UCEC 100478967 + 100478947 100478987 41 ATCGGGACTATGACCGGAATCGGCGAGAGCGCTTCTCGCCA ATCGGGACTATGACCGGAATCGGTGAGAGCGCTTCTCGCCA < 41bp 1 0.749667079009316 1 0.850416421890259 experiment 0.500665841981367 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100478967 chr7:100478970 stopgain 0.491 1 24 hm5C_associated_SNPs_40179 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:100478907-100478975
64251 chr7 55259433 55259433 1 + C T UCEC 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTACTTGGAGGACTGTCGCTTGGTGCACCGCGA < 41bp 1 0.185186361130731 1 0.160867035388947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259433 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_40195 1 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr11 108151823 108151823 1 + C T UCEC 108151830 + 108151810 108151850 41 GTAGCCCTATCTGCGAAAAACAGGCTTTGTTTGCCCTGTGT GTAGCCCTATCTGTGAAAAACAGGCTTTGTTTGCCCTGTGT < 41bp 1 0.313389015226977 1 0.213575839996338 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108151830 chr11:108151823 synonymous SNV . 0 14 hm5C_associated_SNPs_40197 3 0 3 EIF3H POSTAR2 ENCODE chr11:108151806-108151858
64251 chr4 140265354 140265354 1 + G T UCEC 140265344 + 140265324 140265364 41 TTATATCCATATACAGACATCCCCTGACAAGGTGGATTATG TTATATCCATATACAGACATCCCCTGACAATGTGGATTATG < 41bp 1 0.0942845898234704 1 0.0443922877311707 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA15 ENSG00000164134 CDS Human protein_coding chr4:140265344 chr4:140265354 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_40199 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:140265350-140265379
64251 chr16 70500156 70500156 1 + A G UCEC 70500158 + 70500138 70500178 41 TGCTGGACATCATGACCTATCGGGTGAGGCTGGGTGGTGGC TGCTGGACATCATGACCTGTCGGGTGAGGCTGGGTGGTGGC < 41bp 1 0.721381642204181 1 0.735982358455658 experiment 0.557236715591638 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70500158 chr16:70500156 nonsynonymous SNV 0.889 0 19 hm5C_associated_SNPs_40201 0 0 4 DDX24 POSTAR2 ENCODE chr16:70500038-70500174
64251 chr14 100996331 100996331 1 + G A UCEC 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TATCACCCCGTGCTGCCCTCCATCCTCGCCACCTGCTCCTG < 41bp 1 0.168362742760307 1 0.552078127861023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996331 nonsynonymous SNV 0.805 0 22 hm5C_associated_SNPs_40202 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr7 148978924 148978924 1 + G T UCEC 148978930 + 148978910 148978950 41 GAGGAGGGGCGGCAGGAGGCCCCCGGCCGCTCGCCCACCAG GAGGAGGGGCGGCATGAGGCCCCCGGCCGCTCGCCCACCAG < 41bp 1 0.463816764221595 1 0.543089270591736 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148978930 chr7:148978924 nonsynonymous SNV 0.016 0 15 hm5C_associated_SNPs_40206 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148978895-148978932
64251 chr7 148978924 148978924 1 + G T UCEC 148978931 + 148978911 148978951 41 AGGAGGGGCGGCAGGAGGCCCCCGGCCGCTCGCCCACCAGC AGGAGGGGCGGCATGAGGCCCCCGGCCGCTCGCCCACCAGC < 41bp 1 0.464671842602643 1 0.567603349685669 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148978931 chr7:148978924 nonsynonymous SNV 0.016 0 14 hm5C_associated_SNPs_40207 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148978895-148978932
64251 chr19 50902136 50902136 1 + G T UCEC 50902140 + 50902120 50902160 41 GCGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGG GCGGCGGCCAGGCCCATGGCCCGGGGTGCCCCCAAAGCGGG < 41bp 1 0.595563653966497 1 0.814493417739868 experiment 0.808872692067007 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902140 chr19:50902136 nonsynonymous SNV 0.988 1 17 hm5C_associated_SNPs_40208 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr19 50902136 50902136 1 + G T UCEC 50902141 + 50902121 50902161 41 CGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAAAGCGGGC CGGCGGCCAGGCCCATGGCCCGGGGTGCCCCCAAAGCGGGC < 41bp 1 0.749526234289657 1 0.861732721328735 experiment 0.500947531420686 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902141 chr19:50902136 nonsynonymous SNV 0.988 1 16 hm5C_associated_SNPs_40209 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr19 1979220 1979220 1 + C T UCEC 1979211 + 1979191 1979231 41 CTGGGCCACATGTTCATGTACTTCCTGCGCGGCAGCCTCCC CTGGGCCACATGTTCATGTACTTCCTGCGTGGCAGCCTCCC < 41bp 1 0.111365431891216 1 0.0201103091239929 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CSNK1G2 ENSG00000133275 CDS Human protein_coding chr19:1979211 chr19:1979220 synonymous SNV . 0 30 hm5C_associated_SNPs_40210 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:1979202-1979234
64251 chr11 6414510 6414510 1 + T G UCEC 6414500 + 6414480 6414520 41 GGTCTCCGCCTCATCTCTCTCAATATGAATTTTTGTTCCCG GGTCTCCGCCTCATCTCTCTCAATATGAATGTTTGTTCCCG < 41bp 1 0.497050983086358 1 0.69918692111969 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6414500 chr11:6414510 nonsynonymous SNV 1.000 5 31 hm5C_associated_SNPs_40211 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:6414500-6414520
64251 chr4 146468000 146468000 1 + C T UCEC 146468006 + 146467986 146468026 41 TCCAACAATAAGAACCGTTTCTGCCTTGGGCTGCTCTCCAA TCCAACAATAAGAATCGTTTCTGCCTTGGGCTGCTCTCCAA < 41bp 1 0.692141253490398 1 0.108575791120529 experiment 0.615717493019205 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146468006 chr4:146468000 synonymous SNV . 0 15 hm5C_associated_SNPs_40212 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:146467997-146468022
64251 chr19 806424 806424 1 + C T UCEC 806441 + 806421 806461 41 GAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG GAATGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGG < 41bp 1 0.295758610182719 1 0.0476390421390533 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806441 chr19:806424 synonymous SNV . 0 4 hm5C_associated_SNPs_40213 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806424 806424 1 + C T UCEC 806442 + 806422 806462 41 AACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC AATGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGC < 41bp 1 0.391156319747496 1 0.124287933111191 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806442 chr19:806424 synonymous SNV . 0 3 hm5C_associated_SNPs_40214 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806424 806424 1 + C T UCEC 806443 + 806423 806463 41 ACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG ATGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCG < 41bp 1 0.413243405122501 1 0.0302070677280426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806443 chr19:806424 synonymous SNV . 0 2 hm5C_associated_SNPs_40215 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr19 806424 806424 1 + C T UCEC 806444 + 806424 806464 41 CGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG TGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGG < 41bp 1 0.523884558041383 1 0.164771974086761 experiment 0.952230883917234 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806444 chr19:806424 synonymous SNV . 0 1 hm5C_associated_SNPs_40216 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chrX 153696537 153696537 1 + C T UCEC 153696529 + 153696509 153696549 41 ACGCCGTGCGCGTGCTCTTCCCGGGCATCGAGGCCCACCCG ACGCCGTGCGCGTGCTCTTCCCGGGCATTGAGGCCCACCCG < 41bp 1 0.61000643940616 1 0.894956469535828 experiment 0.77998712118768 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696529 chrX:153696537 synonymous SNV . 0 29 hm5C_associated_SNPs_40217 0 0 1 UCHL5 POSTAR2 ENCODE chrX:153696531-153696555
64251 chr8 25167994 25167994 1 + G A UCEC 25168004 + 25167984 25168024 41 ACACTTGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG ACACTTGGTTAATAGATCAACAGCAATAGCCCGGAAGATGG < 41bp 1 0.53920304784823 1 0.200846642255783 experiment 0.921593904303541 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25168004 chr8:25167994 nonsynonymous SNV 0.997 1 11 hm5C_associated_SNPs_40218 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003587 chr8:25167973-25167994
64251 chr17 52991186 52991186 1 + C T UCEC 52991196 + 52991176 52991216 41 TTAAGAAAGGCGTTCAGTTTCCTCCCTCAGAAGCAGAGGCT TTAAGAAAGGTGTTCAGTTTCCTCCCTCAGAAGCAGAGGCT < 41bp 1 0.167171627837374 1 0.0526689291000366 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52991196 chr17:52991186 synonymous SNV . 0 11 hm5C_associated_SNPs_40220 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:52991171-52991189
64251 chr16 24834981 24834981 1 + C T UCEC 24835001 + 24834981 24835021 41 CGGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCC TGGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCC < 41bp 1 0.1159576035053 1 0.0679369568824768 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835001 chr16:24834981 synonymous SNV . 0 1 hm5C_associated_SNPs_40223 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:24834944-24835019
64251 chr1 156883205 156883205 1 + G A UCEC 156883191 + 156883171 156883211 41 GTCCCCTCTTAGGTTCCAGGCCCGCTCTTTGCCAGCCTGCA GTCCCCTCTTAGGTTCCAGGCCCGCTCTTTGCCAACCTGCA < 41bp 1 0.0881678765522927 1 0.0374262630939484 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PEAR1 ENSG00000187800 CDS Human protein_coding chr1:156883191 chr1:156883205 nonsynonymous SNV 0.850 1 35 hm5C_associated_SNPs_40224 0 0 1 TBRG4 POSTAR2 ENCODE chr1:156883197-156883239
64251 chr19 36213611 36213611 1 + G A UCEC 36213602 + 36213582 36213622 41 CCCTCCCTCTCCGGGATCGGCAGGACCTCGCCACAGAGGGT CCCTCCCTCTCCGGGATCGGCAGGACCTCACCACAGAGGGT < 41bp 1 0.522064357696259 1 0.695666134357452 experiment 0.955871284607482 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36213602 chr19:36213611 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_40225 0 0 2 DDX6 POSTAR2 ENCODE chr19:36213530-36213611
64251 chr16 2816051 2816051 1 + G A UCEC 2816031 + 2816011 2816051 41 CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCA < 41bp 1 0.127722741203357 1 0.399181306362152 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816031 chr16:2816051 nonsynonymous SNV 0.996 3 41 hm5C_associated_SNPs_40226 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816051 2816051 1 + G A UCEC 2816050 + 2816030 2816070 41 CCTCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC CCTCTCGACGCCGAAGAGGCCACTCTCGGACACCCCCAACC < 41bp 1 0.145250499799296 1 0.04937344789505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816050 chr16:2816051 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_40227 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816051 2816051 1 + G A UCEC 2816052 + 2816032 2816072 41 TCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG TCTCGACGCCGAAGAGGCCACTCTCGGACACCCCCAACCAG < 41bp 1 0.225988002845324 1 0.130268305540085 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816052 chr16:2816051 nonsynonymous SNV 0.996 3 20 hm5C_associated_SNPs_40228 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr11 66512362 66512362 1 + T C UCEC 66512342 + 66512322 66512362 41 TACCCTTCGACTGGGCGTTGCCGCTGTTCCCTGCGCGGCAT TACCCTTCGACTGGGCGTTGCCGCTGTTCCCTGCGCGGCAC < 41bp 1 0.556767056048728 1 0.354421555995941 experiment 0.886465887902544 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control C11orf80 ENSG00000173715 CDS Human protein_coding chr11:66512342 chr11:66512362 nonsynonymous SNV 0.738 0 41 hm5C_associated_SNPs_40229 0 0 9 DDX3X POSTAR2 ENCODE chr11:66512325-66512395
64251 chr10 81036965 81036965 1 + T C UCEC 81036966 + 81036946 81036986 41 TCCTCCTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCG TCCTCCTGGTGCGAAGAGCCCGGCCGCCTGCTGCTGCTCCG < 41bp 1 0.46459988051746 1 0.398616135120392 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81036966 chr10:81036965 nonsynonymous SNV 0.836 3 20 hm5C_associated_SNPs_40230 0 0 3 DDX24 POSTAR2 ENCODE chr10:81036937-81037031
64251 chr6 33411310 33411310 1 + A C UCEC 33411295 + 33411275 33411315 41 TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCC TAGCAAGAGTGAGGACCTCTCTTCCGGGGTCCCCACGCCCC < 41bp 1 0.221024016074505 1 0.365967869758606 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411295 chr6:33411310 nonsynonymous SNV 0.998 1 36 hm5C_associated_SNPs_40231 0 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr6 44218106 44218106 1 + G T UCEC 44218121 + 44218101 44218141 41 ATAAAGATGATGAAGAAAAACCCAAGATCGAAGATGTGGGT ATAAATATGATGAAGAAAAACCCAAGATCGAAGATGTGGGT < 41bp 1 0.531325645877795 1 0.189257353544235 experiment 0.93734870824441 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218121 chr6:44218106 nonsynonymous SNV 0.990 1 6 hm5C_associated_SNPs_40232 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44218028-44218116
64251 chrX 70519853 70519853 1 + G A UCEC 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTGATGGAACTCCTCCTGCATTCAACCGTGCAGCT < 41bp 1 0.197451928475073 1 0.186262547969818 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519853 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_40236 0 0 49 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:70519820-70519860
64251 chr19 1278948 1278948 1 + G A UCEC 1278943 + 1278923 1278963 41 CCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTG CCTTTTGGAACCTGCACAGCCCGCCAACCTGTTGCCACCTG < 41bp 1 0.386667782264362 1 0.250647068023682 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278943 chr19:1278948 nonsynonymous SNV 0.000 0 26 hm5C_associated_SNPs_40237 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1278924-1278956
64251 chr19 1278948 1278948 1 + G A UCEC 1278968 + 1278948 1278988 41 GACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCT AACCTGTTGCCACCTGCACCCACCGCTGGACCATGCAGCCT < 41bp 1 0.716513369906481 1 0.294561088085175 experiment 0.566973260187037 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1278968 chr19:1278948 nonsynonymous SNV 0.000 0 1 hm5C_associated_SNPs_40238 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1278924-1278956
64251 chr16 78143686 78143686 1 + G A UCEC 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTGCCATACAGATGGGAACAAGAAACTGATGAGAACGGA < 41bp 1 0.337417413440458 1 0.428309142589569 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143686 nonsynonymous SNV 0.977 4 12 hm5C_associated_SNPs_40239 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143676-78143702
64251 chr13 88329297 88329297 1 + C T UCEC 88329294 + 88329274 88329314 41 CAGTGAGTGGAGTTTTGGACCAGCTGAAGTCACTCATCCAA CAGTGAGTGGAGTTTTGGACCAGTTGAAGTCACTCATCCAA < 41bp 1 0.327201151146461 1 0.512624859809875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329294 chr13:88329297 synonymous SNV . 0 24 hm5C_associated_SNPs_40240 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88329240-88329300
64251 chr20 37078028 37078028 1 + T A UCEC 37078022 + 37078002 37078042 41 CCCTTGTATACACCTGCATTCAAAAATGATCACGGGCTGCC CCCTTGTATACACCTGCATTCAAAAAAGATCACGGGCTGCC < 41bp 1 0.477942062095443 1 0.397783815860748 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078022 chr20:37078028 . . 0 27 hm5C_associated_SNPs_40241 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039844 chr20:37078010-37078031
64251 chr20 37078028 37078028 1 + T A UCEC 37078038 + 37078018 37078058 41 CATTCAAAAATGATCACGGGCTGCCTGTGCTCTGGTCATCA CATTCAAAAAAGATCACGGGCTGCCTGTGCTCTGGTCATCA < 41bp 1 0.165212576693727 1 0.0287185609340668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078038 chr20:37078028 . . 0 11 hm5C_associated_SNPs_40242 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039844 chr20:37078010-37078031
64251 chr20 37078028 37078028 1 + T A UCEC 37078042 + 37078022 37078062 41 CAAAAATGATCACGGGCTGCCTGTGCTCTGGTCATCAATAA CAAAAAAGATCACGGGCTGCCTGTGCTCTGGTCATCAATAA < 41bp 1 0.424961850423983 1 0.3985276222229 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078042 chr20:37078028 . . 0 7 hm5C_associated_SNPs_40243 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039844 chr20:37078010-37078031
64251 chr13 103514897 103514897 1 + G A UCEC 103514906 + 103514886 103514926 41 GAGGGGAGAGAGCCCACAGACTCAGTTCCAAAAGAACAAAT GAGGGGAGAGAACCCACAGACTCAGTTCCAAAAGAACAAAT < 41bp 1 0.702103836560984 1 0.568727314472198 experiment 0.595792326878032 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514906 chr13:103514897 synonymous SNV . 0 12 hm5C_associated_SNPs_40246 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:103514887-103514917
64251 chr3 57294018 57294018 1 + G A UCEC 57294032 + 57294012 57294052 41 AGAATCGCATTTATTAGTCACTTGTGACTGTTTAAAGTAAG AGAATCACATTTATTAGTCACTTGTGACTGTTTAAAGTAAG < 41bp 1 0.130995483940352 1 0.0660634934902191 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APPL1 ENSG00000157500 CDS Human protein_coding chr3:57294032 chr3:57294018 synonymous SNV . 0 7 hm5C_associated_SNPs_40247 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:57294015-57294048
64251 chr20 39793976 39793976 1 + G A UCEC 39793996 + 39793976 39794016 41 GCATCCTCTACCTGGAGGACCCTGTGAACCACGTGAGGACT ACATCCTCTACCTGGAGGACCCTGTGAACCACGTGAGGACT < 41bp 1 0.0535400838210083 1 0.122837662696838 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39793996 chr20:39793976 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_40248 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:39793976-39794001
64251 chr17 38609317 38609317 1 + G A UCEC 38609301 + 38609281 38609321 41 AGCGCCCATGACCGCAGGTGCCTGCAGAAGCACTTCGCCAA AGCGCCCATGACCGCAGGTGCCTGCAGAAGCACTTCACCAA < 41bp 1 0.0966843673439178 1 0.119398534297943 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38609301 chr17:38609317 nonsynonymous SNV 0.751 0 37 hm5C_associated_SNPs_40249 0 0 2 TARBP2 POSTAR2 GSE49648,GSM1204358 chr17:38609300-38609320
64251 chr1 33745922 33745922 1 + G A UCEC 33745921 + 33745901 33745941 41 ATCAAGACAATCCAGGGCCACGGCCTGCTTGGCCCCCCCAA ATCAAGACAATCCAGGGCCACAGCCTGCTTGGCCCCCCCAA < 41bp 1 0.438460527861923 1 0.490646868944168 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33745921 chr1:33745922 nonsynonymous SNV 0.984 0 22 hm5C_associated_SNPs_40250 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:33745906-33745930
64251 chr11 47600880 47600880 1 + A G UCEC 47600875 + 47600855 47600895 41 GAGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATG GAGGCGGGAGAGCGCCGGGGCCGACGCGCGCCGTGAGTATG < 41bp 1 0.12738662888272 1 0.111426562070847 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600875 chr11:47600880 nonsynonymous SNV 0.995 0 26 hm5C_associated_SNPs_40252 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600880 47600880 1 + A G UCEC 47600876 + 47600856 47600896 41 AGGCGGGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGT AGGCGGGAGAGCGCCGGGGCCGACGCGCGCCGTGAGTATGT < 41bp 1 0.710712826184056 1 0.262976258993149 experiment 0.578574347631888 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600876 chr11:47600880 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_40253 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600880 47600880 1 + A G UCEC 47600885 + 47600865 47600905 41 AGCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGC AGCGCCGGGGCCGACGCGCGCCGTGAGTATGTGCGGGCAGC < 41bp 1 0.273288574884511 1 0.172491788864136 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600885 chr11:47600880 nonsynonymous SNV 0.995 0 16 hm5C_associated_SNPs_40254 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 47600880 47600880 1 + A G UCEC 47600886 + 47600866 47600906 41 GCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGGCAGCG GCGCCGGGGCCGACGCGCGCCGTGAGTATGTGCGGGCAGCG < 41bp 1 0.752211874169975 1 0.196259200572968 experiment 0.49557625166005 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600886 chr11:47600880 nonsynonymous SNV 0.995 0 15 hm5C_associated_SNPs_40255 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chrX 67741218 67741218 1 + C A UCEC 67741231 + 67741211 67741251 41 CAGAATGCTGCAAAGAGACTCTGCAGATAGTGAAAAAGATG CAGAATGATGCAAAGAGACTCTGCAGATAGTGAAAAAGATG < 41bp 1 0.727499999010585 1 0.402679234743118 experiment 0.54500000197883 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YIPF6 ENSG00000181704 CDS Human protein_coding chrX:67741231 chrX:67741218 nonsynonymous SNV 0.696 4 8 hm5C_associated_SNPs_40256 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:67741213-67741240
64251 chr16 628387 628387 1 + C T UCEC 628379 + 628359 628399 41 TGGCCCCTGTGTCCCTGCAGCACGTGGCCGAGGAGCTCCAG TGGCCCCTGTGTCCCTGCAGCACGTGGCTGAGGAGCTCCAG < 41bp 1 0.396093135589358 1 0.319692820310593 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:628379 chr16:628387 synonymous SNV . 0 29 hm5C_associated_SNPs_40257 0 0 3 BUD13 POSTAR2 ENCODE chr16:628341-628427
64251 chr9 100405542 100405542 1 + A G UCEC 100405545 + 100405525 100405565 41 ATTAGTTGGACTACTGAATGCCAGGAATTACAATTTTGGTG ATTAGTTGGACTACTGAGTGCCAGGAATTACAATTTTGGTG < 41bp 1 0.261614222181113 1 0.445479840040207 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100405545 chr9:100405542 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_40258 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100405499-100405568
64251 chr20 61450582 61450582 1 + G T UCEC 61450587 + 61450567 61450607 41 TGCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAAC TGCACAGGGACCAAATGGGGCCCCAGGAAAGCCGGGGAAAC < 41bp 1 0.347075885706104 1 0.0726353824138641 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450587 chr20:61450582 nonsynonymous SNV 0.979 1 16 hm5C_associated_SNPs_40259 0 0 3 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr20 61450582 61450582 1 + G T UCEC 61450588 + 61450568 61450608 41 GCACAGGGACCAAAGGGGGCCCCAGGAAAGCCGGGGAAACC GCACAGGGACCAAATGGGGCCCCAGGAAAGCCGGGGAAACC < 41bp 1 0.184780004599031 1 0.171294838190079 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450588 chr20:61450582 nonsynonymous SNV 0.979 1 15 hm5C_associated_SNPs_40260 0 0 3 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr19 2810303 2810303 1 + C T UCEC 2810285 + 2810265 2810305 41 GACCTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGG GACCTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGTGG < 41bp 1 0.203173930995712 1 0.513234198093414 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810285 chr19:2810303 nonsynonymous SNV 0.820 0 39 hm5C_associated_SNPs_40261 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:2810300-2810320
64251 chr19 2810303 2810303 1 + C T UCEC 2810288 + 2810268 2810308 41 CTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGCGGAGT CTGGGCACTCTGAGGCTCTGCCCCATCCCTGCAGGTGGAGT < 41bp 1 0.185086842148106 1 0.04825559258461 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810288 chr19:2810303 nonsynonymous SNV 0.820 0 36 hm5C_associated_SNPs_40262 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:2810300-2810320
64251 chr21 46931112 46931112 1 + G A UCEC 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCGGGGCACGCATCTTCTCCTTTGACAGCAAGGACGTCC < 41bp 1 0.0521757781867179 1 0.110533714294434 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931112 nonsynonymous SNV 0.699 4 29 hm5C_associated_SNPs_40263 0 0 6 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr21 46931112 46931112 1 + G A UCEC 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCGGGGCACGCATCTTCTCCTTTGACAGCAAGGACGTCCT < 41bp 1 0.0636834779663354 1 0.0525189340114594 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931112 nonsynonymous SNV 0.699 4 28 hm5C_associated_SNPs_40264 0 0 6 BUD13 POSTAR2 ENCODE chr21:46931105-46931140
64251 chr10 99216584 99216584 1 + A G UCEC 99216603 + 99216583 99216623 41 AATGGAATGAGCTGGGAGCCCCCTCCCTGGGTGACTGCTCA AGTGGAATGAGCTGGGAGCCCCCTCCCTGGGTGACTGCTCA < 41bp 1 0.139090360697519 1 0.111596584320068 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99216603 chr10:99216584 nonsynonymous SNV 0.998 2 2 hm5C_associated_SNPs_40265 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:99216584-99216614
64251 chr11 9451353 9451353 1 + C A UCEC 9451359 + 9451339 9451379 41 TGAAGAAGTTACTCCTATTGCAGTAGAAATGACACAACATT TGAAGAAGTTACTCATATTGCAGTAGAAATGACACAACATT < 41bp 1 0.566084709765909 1 0.642471015453339 experiment 0.867830580468181 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9451359 chr11:9451353 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_40267 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9451254-9451355
64251 chr3 183860651 183860651 1 + C A UCEC 183860652 + 183860632 183860672 41 CCGGACAGCCGGGGAGGCTCCCCTCAGATGGATGACATCAA CCGGACAGCCGGGGAGGCTACCCTCAGATGGATGACATCAA < 41bp 1 0.132071474476208 1 0.0547309517860413 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860652 chr3:183860651 nonsynonymous SNV 0.998 4 20 hm5C_associated_SNPs_40269 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183860572-183860663
64251 chrX 69354390 69354390 1 + A G UCEC 69354374 + 69354354 69354394 41 CTCCTTTTTGCTCTTCCAGCCGAAATGAAGATTTGGAAGAG CTCCTTTTTGCTCTTCCAGCCGAAATGAAGATTTGGGAGAG < 41bp 1 0.598755320205694 1 0.859632968902588 experiment 0.802489359588612 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69354374 chrX:69354390 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_40271 0 0 3 BUD13 POSTAR2 ENCODE chrX:69354364-69354408
64251 chr17 48557329 48557329 1 + G C UCEC 48557327 + 48557307 48557347 41 CCTGGAGGCTGTGGCACAGGCAGCCCACCTGCCTGCAGACT CCTGGAGGCTGTGGCACAGGCACCCCACCTGCCTGCAGACT < 41bp 1 0.393145431139776 1 0.109751880168915 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557327 chr17:48557329 nonsynonymous SNV 0.354 0 23 hm5C_associated_SNPs_40279 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48557329-48557353
64251 chr19 11032431 11032431 1 + T C UCEC 11032439 + 11032419 11032459 41 CACTACGGGAGCTAGGGGCCCGCCCCGCGGACTGACAGCAC CACTACGGGAGCCAGGGGCCCGCCCCGCGGACTGACAGCAC < 41bp 1 0.343515230224353 1 0.364709973335266 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CARM1 ENSG00000142453 CDS Human protein_coding chr19:11032439 chr19:11032431 stoploss 0.970 0 13 hm5C_associated_SNPs_40280 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11032418-11032439
64251 chr21 46900431 46900431 1 + G A UCEC 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTACGGGT < 41bp 1 0.035632755321488 1 0.195154398679733 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900431 synonymous SNV . 0 36 hm5C_associated_SNPs_40282 0 0 8 FMR1 POSTAR2 ENCODE chr21:46900396-46900434
64251 chr8 22473321 22473321 1 + C A UCEC 22473327 + 22473307 22473347 41 TCCCAGAGGCCCCTCCACCCCCCCTAGAACCTGCTGTCATC TCCCAGAGGCCCCTACACCCCCCCTAGAACCTGCTGTCATC < 41bp 1 0.274921988668513 1 0.132779747247696 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22473327 chr8:22473321 nonsynonymous SNV 0.849 1 15 hm5C_associated_SNPs_40283 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:22473321-22473322
64251 chr1 20224103 20224103 1 + G T UCEC 20224116 + 20224096 20224136 41 TACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACC TACGACATTGTTCGGAGGATCAATGACAACTCAGAGGCACC < 41bp 1 0.243127314685938 1 0.284197211265564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20224116 chr1:20224103 nonsynonymous SNV 0.991 4 8 hm5C_associated_SNPs_40284 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:20224048-20224147
64251 chr7 101845121 101845121 1 + C T UCEC 101845118 + 101845098 101845138 41 GCCAAGGCCGAAGAAACGGGCGGCGGGAAAGAGAAGGGCAG GCCAAGGCCGAAGAAACGGGCGGTGGGAAAGAGAAGGGCAG < 41bp 1 0.194845009291193 1 0.431856393814087 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101845118 chr7:101845121 synonymous SNV . 0 24 hm5C_associated_SNPs_40285 0 0 5 AGGF1 POSTAR2 ENCODE chr7:101845046-101845217
64251 chr1 41215334 41215334 1 + A G UCEC 41215344 + 41215324 41215364 41 TTCACACAGAAGATAACAAGCGCCGGACTCTACAGGTATTA TTCACACAGAGGATAACAAGCGCCGGACTCTACAGGTATTA < 41bp 1 0.645180328316844 1 0.524725914001465 experiment 0.709639343366311 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFYC ENSG00000066136 CDS Human protein_coding chr1:41215344 chr1:41215334 synonymous SNV . 0 11 hm5C_associated_SNPs_40286 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:41215317-41215343
64251 chr21 45736366 45736366 1 + G A UCEC 45736382 + 45736362 45736402 41 CCACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA CCACATGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGA < 41bp 1 0.388697325797164 1 0.234776675701141 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736382 chr21:45736366 nonsynonymous SNV 0.662 4 5 hm5C_associated_SNPs_40287 0 0 7 FMR1 POSTAR2 ENCODE chr21:45736328-45736403
64251 chr21 45736366 45736366 1 + G A UCEC 45736384 + 45736364 45736404 41 ACGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC ACATGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATC < 41bp 1 0.0837831022520772 1 0.0993862152099609 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736384 chr21:45736366 nonsynonymous SNV 0.662 4 3 hm5C_associated_SNPs_40288 0 0 7 FMR1 POSTAR2 ENCODE chr21:45736328-45736403
64251 chr21 45736366 45736366 1 + G A UCEC 45736385 + 45736365 45736405 41 CGTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC CATGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCC < 41bp 1 0.0737244474751506 1 0.0793107748031616 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736385 chr21:45736366 nonsynonymous SNV 0.662 4 2 hm5C_associated_SNPs_40289 0 0 7 FMR1 POSTAR2 ENCODE chr21:45736328-45736403
64251 chr21 45736366 45736366 1 + G A UCEC 45736386 + 45736366 45736406 41 GTGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT ATGCAGCGGGGAGGGACGCCCTCTGCCTTCGACCGGATCCT < 41bp 1 0.354993313327899 1 0.373308569192886 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45736386 chr21:45736366 nonsynonymous SNV 0.662 4 1 hm5C_associated_SNPs_40290 0 0 7 FMR1 POSTAR2 ENCODE chr21:45736328-45736403
64251 chr11 64033415 64033415 1 + T C UCEC 64033434 + 64033414 64033454 41 ATCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAG ACCAGGAGTTCCAGAACAGACAGGTGCAGAGCCTGCTGGAG < 41bp 1 0.661398864362401 1 0.832162141799927 experiment 0.677202271275197 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64033434 chr11:64033415 synonymous SNV . 0 2 hm5C_associated_SNPs_40291 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:64033400-64033420
64251 chr12 56531997 56531997 1 + C T UCEC 56531999 + 56531979 56532019 41 GAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG GAGGATGTCCCATCTGGCTGCCTGCACTTGCGCCTGGAGCG < 41bp 1 0.0534856748086668 1 0.35758364200592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531999 chr12:56531997 nonsynonymous SNV 0.998 2 19 hm5C_associated_SNPs_40292 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr12 56531997 56531997 1 + C T UCEC 56532000 + 56531980 56532020 41 AGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGT AGGATGTCCCATCTGGCTGCCTGCACTTGCGCCTGGAGCGT < 41bp 1 0.641438608042177 1 0.643640995025635 experiment 0.717122783915646 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532000 chr12:56531997 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_40293 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531990-56532008
64251 chr7 99956610 99956610 1 + C T UCEC 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTTTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG < 41bp 1 0.553800524244235 1 0.750084042549133 experiment 0.892398951511529 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956610 nonsynonymous SNV 0.049 3 7 hm5C_associated_SNPs_40294 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99956585-99956627
64251 chr22 24204367 24204367 1 + C A UCEC 24204381 + 24204361 24204401 41 ACCTCTCTATCATCAATGCCCCGACCTTGGTATGTATCCTC ACCTCTATATCATCAATGCCCCGACCTTGGTATGTATCCTC < 41bp 1 0.09344841978039 1 0.0547647178173065 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204381 chr22:24204367 nonsynonymous SNV 0.993 3 7 hm5C_associated_SNPs_40295 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr22 24204367 24204367 1 + C A UCEC 24204382 + 24204362 24204402 41 CCTCTCTATCATCAATGCCCCGACCTTGGTATGTATCCTCT CCTCTATATCATCAATGCCCCGACCTTGGTATGTATCCTCT < 41bp 1 0.159949257247817 1 0.334225416183472 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204382 chr22:24204367 nonsynonymous SNV 0.993 3 6 hm5C_associated_SNPs_40296 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr22 24204367 24204367 1 + C A UCEC 24204386 + 24204366 24204406 41 TCTATCATCAATGCCCCGACCTTGGTATGTATCCTCTCTGG TATATCATCAATGCCCCGACCTTGGTATGTATCCTCTCTGG < 41bp 1 0.451345587816014 1 0.0657042562961578 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC2A11 ENSG00000133460 CDS Human protein_coding chr22:24204386 chr22:24204367 nonsynonymous SNV 0.993 3 2 hm5C_associated_SNPs_40297 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:24204350-24204371
64251 chr9 33917178 33917178 1 + G T UCEC 33917160 + 33917140 33917180 41 GACGACTTGTATGATGACGACATTGATGATGAAGATGAGGA GACGACTTGTATGATGACGACATTGATGATGAAGATGATGA < 41bp 1 0.0756682895465843 1 0.0603859722614288 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917160 chr9:33917178 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_40301 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr1 235600758 235600758 1 + T G UCEC 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCAGTGGC < 41bp 1 0.61047073569724 1 0.112267315387726 experiment 0.779058528605519 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600758 nonsynonymous SNV 0.005 4 37 hm5C_associated_SNPs_40302 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235600755-235600789
64251 chr1 43893249 43893249 1 + T A UCEC 43893251 + 43893231 43893271 41 CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAG CACCATTCCGTCGAGACTAACAGGCTTACGCTGGGCGTCAG < 41bp 1 0.326197916599196 1 0.898139357566833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893251 chr1:43893249 stopgain 0.974 0 19 hm5C_associated_SNPs_40306 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:43893229-43893253
64251 chr1 154947242 154947242 1 + C T UCEC 154947230 + 154947210 154947250 41 AACCGAGCGATCATGTCGCACAAACAAATTTACTATTCGGA AACCGAGCGATCATGTCGCACAAACAAATTTATTATTCGGA < 41bp 1 0.0861590633341113 1 0.158831715583801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS1B ENSG00000173207 CDS Human protein_coding chr1:154947230 chr1:154947242 synonymous SNV . 0 33 hm5C_associated_SNPs_40307 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154947220-154947255
64251 chr7 56129502 56129502 1 + T A UCEC 56129510 + 56129490 56129530 41 TCAAGCAGAACATTCAGAATCAGGTCAGCTTGTGGGTGTGG TCAAGCAGAACAATCAGAATCAGGTCAGCTTGTGGGTGTGG < 41bp 1 0.576086153956985 1 0.389569699764252 experiment 0.84782769208603 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56129510 chr7:56129502 nonsynonymous SNV 0.999 0 13 hm5C_associated_SNPs_40308 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:56129446-56129518
64251 chr6 116600417 116600417 1 - C T UCEC 116600405 - 116600385 116600425 41 TGGAGGTAGAGGAGCAGCCGCCAGAAGGTGAAGAAATAGAA TGGAGGTAAAGGAGCAGCCGCCAGAAGGTGAAGAAATAGAA < 41bp 1 0.493566353661123 1 0.447255969047546 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600405 chr6:116600417 nonsynonymous SNV 0.009 0 9 hm5C_associated_SNPs_40309 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:116600380-116600440
64251 chr6 116600417 116600417 1 - C T UCEC 116600411 - 116600391 116600431 41 AGCAGATGGAGGTAGAGGAGCAGCCGCCAGAAGGTGAAGAA AGCAGATGGAGGTAAAGGAGCAGCCGCCAGAAGGTGAAGAA < 41bp 1 0.573885541995956 1 0.48793026804924 experiment 0.852228916008088 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600411 chr6:116600417 nonsynonymous SNV 0.009 0 15 hm5C_associated_SNPs_40310 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:116600380-116600440
64251 chr1 70883646 70883646 1 + G A UCEC 70883650 + 70883630 70883670 41 TGCTTCAGGTTTAGCAGCCACTGTAACTATTACCCATCTTT TGCTTCAGGTTTAGCAACCACTGTAACTATTACCCATCTTT < 41bp 1 0.429426975785173 1 0.237915933132172 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTH ENSG00000116761 CDS Human protein_coding chr1:70883650 chr1:70883646 nonsynonymous SNV 0.802 4 17 hm5C_associated_SNPs_40311 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:70883638-70883670
64251 chr1 171519298 171519298 1 + T C UCEC 171519315 + 171519295 171519335 41 TGGTTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTT TGGCTTTACTGAAGTGGTATCCAAAAAACAACAAAAACGTT < 41bp 1 0.0854618255166637 1 0.727924108505249 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171519315 chr1:171519298 synonymous SNV . 0 4 hm5C_associated_SNPs_40312 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:171519228-171519302
64251 chr16 57171156 57171156 1 + C T UCEC 57171175 + 57171155 57171195 41 CCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG CTGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG < 41bp 1 0.611750001214272 1 0.341713309288025 experiment 0.776499997571457 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171175 chr16:57171156 nonsynonymous SNV 0.998 4 2 hm5C_associated_SNPs_40315 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr16 22337236 22337236 1 + C T UCEC 22337234 + 22337214 22337254 41 GTGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAG GTGTGCGGATCAAGGAGGAGCCTGTGAGCGAGGAGGGCGAG < 41bp 1 0.26159337864261 1 0.215464681386948 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337234 chr16:22337236 synonymous SNV . 0 23 hm5C_associated_SNPs_40316 0 0 9 PPIG POSTAR2 ENCODE chr16:22337134-22337258
64251 chr16 22337236 22337236 1 + C T UCEC 22337235 + 22337215 22337255 41 TGTGCGGATCAAGGAGGAGCCCGTGAGCGAGGAGGGCGAGG TGTGCGGATCAAGGAGGAGCCTGTGAGCGAGGAGGGCGAGG < 41bp 1 0.56834938698686 1 0.129149377346039 experiment 0.86330122602628 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337235 chr16:22337236 synonymous SNV . 0 22 hm5C_associated_SNPs_40317 0 0 9 PPIG POSTAR2 ENCODE chr16:22337134-22337258
64251 chr22 45579383 45579383 1 + C T UCEC 45579387 + 45579367 45579407 41 GACACAGCTTTTGGTGCGGGCAGACACCAATTTAGGTGGGT GACACAGCTTTTGGTGTGGGCAGACACCAATTTAGGTGGGT < 41bp 1 0.142146113119508 1 0.465346187353134 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUP50 ENSG00000093000 CDS Human protein_coding chr22:45579387 chr22:45579383 nonsynonymous SNV 0.997 4 17 hm5C_associated_SNPs_40318 0 0 1 PRPF8 POSTAR2 ENCODE chr22:45579378-45579438
64251 chr20 47896922 47896922 1 + G A UCEC 47896909 + 47896889 47896929 41 GACAGATCGACTATGTTGATCTAACTTTTCTAAGCCAGTTT GACAGATCGACTATGTTGATCTAACTTTTCTAAACCAGTTT < 41bp 1 0.0899695107467835 1 0.122874319553375 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896909 chr20:47896922 . . 0 34 hm5C_associated_SNPs_40319 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896915-47896939
64251 chr20 47896922 47896922 1 + G A UCEC 47896942 + 47896922 47896962 41 GCCAGTTTCTGTCTGATATGCCAGCTTGAGCAGCTCCTTTG ACCAGTTTCTGTCTGATATGCCAGCTTGAGCAGCTCCTTTG < 41bp 1 0.230526082422532 1 0.0709923803806305 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNORD12B ENSG00000222365 ncRNA_exonic Human snoRNA chr20:47896942 chr20:47896922 . . 0 1 hm5C_associated_SNPs_40320 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47896915-47896939
64251 chr3 47046792 47046792 1 + G A UCEC 47046776 + 47046756 47046796 41 TACCTCATCCGCGTGGAGCCCTTCACCTCCCTGCACGTCCA TACCTCATCCGCGTGGAGCCCTTCACCTCCCTGCACATCCA < 41bp 1 0.229059075011673 1 0.311226785182953 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47046776 chr3:47046792 nonsynonymous SNV 0.982 0 37 hm5C_associated_SNPs_40321 0 0 3 DDX24 POSTAR2 ENCODE chr3:47046749-47046795
64251 chr7 73604160 73604160 1 + C T UCEC 73604152 + 73604132 73604172 41 TATTTTCCCTTTATCATTAGCTGTTGGGCGATCGGTCACTT TATTTTCCCTTTATCATTAGCTGTTGGGTGATCGGTCACTT < 41bp 1 0.2065848394094 1 0.00834459066390991 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4H ENSG00000106682 CDS Human protein_coding chr7:73604152 chr7:73604160 synonymous SNV . 0 29 hm5C_associated_SNPs_40322 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:73604143-73604181
64251 chr1 151374065 151374065 1 + A G UCEC 151374064 + 151374044 151374084 41 AGGTGTTGAAATAGAGGGACCATTGTCTACAGAGACCAACT AGGTGTTGAAATAGAGGGACCGTTGTCTACAGAGACCAACT < 41bp 1 0.137155660804335 1 0.102102071046829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151374064 chr1:151374065 synonymous SNV . 0 22 hm5C_associated_SNPs_40324 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151374016-151374077
64251 chr5 71493384 71493384 1 + C T UCEC 71493379 + 71493359 71493399 41 AAAGTTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATC AAAGTTTTGTCTCCTTTACGCAGCCTGCCCCTCATTGGATC < 41bp 1 0.235969748960134 1 0.429347455501556 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493379 chr5:71493384 nonsynonymous SNV 0.606 3 26 hm5C_associated_SNPs_40325 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr5 71493384 71493384 1 + C T UCEC 71493383 + 71493363 71493403 41 TTTTGTCTCCTTTACGCAGCCCGCCCCTCATTGGATCCGAG TTTTGTCTCCTTTACGCAGCCTGCCCCTCATTGGATCCGAG < 41bp 1 0.110121381407716 1 0.111367434263229 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493383 chr5:71493384 nonsynonymous SNV 0.606 3 22 hm5C_associated_SNPs_40326 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71493360-71493400
64251 chr15 22955253 22955253 1 + C T UCEC 22955235 + 22955215 22955255 41 AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGCCG AAGGACCCCAAGAGCGGCTTCGACATAAAAGTACCACGTCG < 41bp 1 0.7576035615113 1 0.608900725841522 experiment 0.484792876977399 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22955235 chr15:22955253 synonymous SNV . 0 39 hm5C_associated_SNPs_40328 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr15:22955250-22955275
64251 chr1 42925433 42925433 1 + A G UCEC 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTGATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA < 41bp 1 0.0715687539490957 1 0.0766753554344177 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925433 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_40330 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr16 2806558 2806558 1 + C T UCEC 2806567 + 2806547 2806587 41 AGCGCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAG AGCGCAAGCGGTGCGTCGAGCTGCGATGCCTCGAGCTGGAG < 41bp 1 0.590478686780193 1 0.18827360868454 experiment 0.819042626439614 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806567 chr16:2806558 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_40331 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2806511-2806562
64251 chr16 2806558 2806558 1 + C T UCEC 2806570 + 2806550 2806590 41 GCAAGCGGCGCGTCGAGCTGCGATGCCTCGAGCTGGAGGAG GCAAGCGGTGCGTCGAGCTGCGATGCCTCGAGCTGGAGGAG < 41bp 1 0.219474062559622 1 0.252280622720718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806570 chr16:2806558 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_40332 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2806511-2806562
64251 chr16 67316195 67316195 1 + G A UCEC 67316185 + 67316165 67316205 41 GGCTGGCATGGCTACAATGCCAGGGGGGCCGGGAGCTGACA GGCTGGCATGGCTACAATGCCAGGGGGGCCAGGAGCTGACA < 41bp 1 0.783786762393409 1 0.935434103012085 experiment 0.432426475213182 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67316185 chr16:67316195 nonsynonymous SNV 0.232 0 31 hm5C_associated_SNPs_40334 0 0 1 PPIG POSTAR2 ENCODE chr16:67316176-67316214
64251 chr15 74325022 74325022 1 + A T UCEC 74325006 + 74324986 74325026 41 TACAGTCAGTGCCCGGGGCACACCCCGTGCCAGTGTACGCC TACAGTCAGTGCCCGGGGCACACCCCGTGCCAGTGTTCGCC < 41bp 1 0.30794270951333 1 0.0548006296157837 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PML ENSG00000140464 CDS Human protein_coding chr15:74325006 chr15:74325022 nonsynonymous SNV 0.001 0 37 hm5C_associated_SNPs_40335 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:74325020-74325051
64251 chr2 128867290 128867290 1 + T C UCEC 128867287 + 128867267 128867307 41 GAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA GAAGACTTGTGAATCTGATACCCCTGAGGCTCTTCTACTGA < 41bp 1 0.093310515274827 1 0.0823681652545929 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128867287 chr2:128867290 nonsynonymous SNV 0.038 4 24 hm5C_associated_SNPs_40336 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:128867264-128867315
64251 chr2 219679347 219679347 1 + G A UCEC 219679360 + 219679340 219679380 41 CCCCACCGCTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG CCCCACCACTGGCTGAGAAACAGCCAGCCTGCTACCCCCAG < 41bp 1 0.459297450464685 1 0.214713901281357 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679360 chr2:219679347 nonsynonymous SNV 0.637 5 8 hm5C_associated_SNPs_40338 1 0 6 DDX55 POSTAR2 ENCODE chr2:219679273-219679352
64251 chr14 74424915 74424915 1 + G A UCEC 74424923 + 74424903 74424943 41 CCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC CCATTTCCTATGACCGACTCCAGCCCTTGGGTTCATATTAC < 41bp 1 0.321542626452107 1 0.106587618589401 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ6 ENSG00000119723 CDS Human protein_coding chr14:74424923 chr14:74424915 nonsynonymous SNV 0.980 0 13 hm5C_associated_SNPs_40340 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:74424902-74424934
64251 chr17 4905844 4905844 1 + C T UCEC 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCTCATCCTGGG < 41bp 1 0.557399178575618 1 0.684067249298096 experiment 0.885201642848764 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905844 nonsynonymous SNV 0.997 3 32 hm5C_associated_SNPs_40341 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:4905841-4905872
64251 chr2 67631733 67631733 1 + A G UCEC 67631731 + 67631711 67631751 41 TCAGAAAGTATATGTGAGATCAATAATAATTCCGAACATGG TCAGAAAGTATATGTGAGATCAGTAATAATTCCGAACATGG < 41bp 1 0.634913078504186 1 0.0596550703048706 experiment 0.730173842991629 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ETAA1 ENSG00000143971 CDS Human protein_coding chr2:67631731 chr2:67631733 nonsynonymous SNV 0.977 1 23 hm5C_associated_SNPs_40342 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:67631721-67631742
64251 chr16 310004 310004 1 + C T UCEC 309995 + 309975 310015 41 CTCTCCCTGCACCTTTGCAGCTGCTGTGTCGGGGGCCAACG CTCTCCCTGCACCTTTGCAGCTGCTGTGTTGGGGGCCAACG < 41bp 1 0.520943454345205 1 0.052081823348999 experiment 0.958113091309589 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:309995 chr16:310004 nonsynonymous SNV 0.023 3 30 hm5C_associated_SNPs_40343 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:310002-310029
64251 chr10 24817003 24817003 1 + C T UCEC 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCTCACTG < 41bp 1 0.126767731673633 1 0.0903530716896057 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24817003 nonsynonymous SNV 0.002 1 36 hm5C_associated_SNPs_40345 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24817003 24817003 1 + C T UCEC 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATCTGGAGATGCCGCCAGCCACAGGCTCACTGCCAA < 41bp 1 0.250882894579743 1 0.69299578666687 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24817003 nonsynonymous SNV 0.002 1 32 hm5C_associated_SNPs_40346 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr19 7585170 7585170 1 + G A UCEC 7585187 + 7585167 7585207 41 TACGCCTGCCCGCACTGCTCCAAGGCCTTCGGCCAGAGCTC TACACCTGCCCGCACTGCTCCAAGGCCTTCGGCCAGAGCTC < 41bp 1 0.629032054151826 1 0.686919033527374 experiment 0.741935891696349 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7585187 chr19:7585170 nonsynonymous SNV 0.889 0 4 hm5C_associated_SNPs_40347 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:7585167-7585187
64251 chr11 65270050 65270050 1 + T C UCEC 65270066 + 65270046 65270086 41 AATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGG AATGCCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGG < 41bp 1 0.0784110468276906 1 0.137608468532562 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270066 chr11:65270050 . . 0 5 hm5C_associated_SNPs_40348 0 0 75 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65269960-65270060
64251 chr17 45757957 45757957 1 + G A UCEC 45757956 + 45757936 45757976 41 ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACAAA ATGAATTGTTAACTGAAGGGCAGAGATCGAAGACTAACAAA < 41bp 1 0.357148945768975 1 0.231601715087891 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757956 chr17:45757957 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_40349 0 0 58 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr7 150761823 150761823 1 + C T UCEC 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCTGTC < 41bp 1 0.539258563340379 1 0.466611444950104 experiment 0.921482873319242 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761823 nonsynonymous SNV 0.001 0 38 hm5C_associated_SNPs_40352 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150761819-150761848
64251 chr8 92092939 92092939 1 + C T UCEC 92092950 + 92092930 92092970 41 ACACAGCTGCATGGGGAGGTCAGCTTGAGGTAAGTTTGTAG ACACAGCTGTATGGGGAGGTCAGCTTGAGGTAAGTTTGTAG < 41bp 1 0.600725503010964 1 0.818793058395386 experiment 0.798548993978073 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92092950 chr8:92092939 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_40353 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:92092921-92092948
64251 chr16 30736387 30736387 1 + G A UCEC 30736401 + 30736381 30736421 41 CACCTCGTTCCCCTTTTTATCTGGTAAGTTTTACTTCCTCA CACCTCATTCCCCTTTTTATCTGGTAAGTTTTACTTCCTCA < 41bp 1 0.406546938851531 1 0.175181895494461 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30736401 chr16:30736387 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_40355 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:30736343-30736404
64251 chr1 10231371 10231371 1 + C A UCEC 10231351 + 10231331 10231371 41 GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGC GATATTTACTTACAGCTGGACTGTGCTCGGTTCGCGAAAGA < 41bp 1 0.21287136012134 1 0.149365782737732 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10231351 chr1:10231371 nonsynonymous SNV 0.995 4 41 hm5C_associated_SNPs_40356 0 0 4 FXR2 POSTAR2 ENCODE chr1:10231334-10231386
64251 chr19 47763896 47763896 1 + G A UCEC 47763890 + 47763870 47763910 41 GGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGG GGTCTCCTGGGACCCCTCGGCCCCCAAGGGCCAGCAAGGGG < 41bp 1 0.192725921324049 1 0.181960314512253 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763890 chr19:47763896 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_40358 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763896 47763896 1 + G A UCEC 47763891 + 47763871 47763911 41 GTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGG GTCTCCTGGGACCCCTCGGCCCCCAAGGGCCAGCAAGGGGG < 41bp 1 0.599947918705147 1 0.439490735530853 experiment 0.800104162589705 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763891 chr19:47763896 nonsynonymous SNV 0.998 3 26 hm5C_associated_SNPs_40359 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763896 47763896 1 + G A UCEC 47763892 + 47763872 47763912 41 TCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGG TCTCCTGGGACCCCTCGGCCCCCAAGGGCCAGCAAGGGGGG < 41bp 1 0.494915382940664 1 0.26748788356781 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763892 chr19:47763896 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_40360 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763896 47763896 1 + G A UCEC 47763893 + 47763873 47763913 41 CTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGC CTCCTGGGACCCCTCGGCCCCCAAGGGCCAGCAAGGGGGGC < 41bp 1 0.31055177078279 1 0.501557588577271 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763893 chr19:47763896 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_40361 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr19 47763896 47763896 1 + G A UCEC 47763913 + 47763893 47763933 41 CCAGGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGG CCAAGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGG < 41bp 1 0.473021822052727 1 0.424394637346268 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763913 chr19:47763896 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_40362 0 0 6 BUD13 POSTAR2 ENCODE chr19:47763841-47763900
64251 chr12 95868057 95868057 1 + A G UCEC 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACGGCTGAGGAAGCGGCCAAGAAAAAAAGACGAAAGA < 41bp 1 0.271476564834077 1 0.489746391773224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868057 synonymous SNV . 0 19 hm5C_associated_SNPs_40363 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr3 49052385 49052385 1 + C T UCEC 49052377 + 49052357 49052397 41 GCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTG GCAGTGAAGATGGATCCCTCCATGTCTTTGTGCTTGCTGTG < 41bp 1 0.206246084894091 1 0.068099707365036 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49052377 chr3:49052385 synonymous SNV . 0 29 hm5C_associated_SNPs_40364 0 0 17 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:49052340-49052400
64251 chr7 44801161 44801161 1 + C T UCEC 44801172 + 44801152 44801192 41 TTCCAGCTGCGAGACTCAGTCTACAAGACCCTGATAATGAG TTCCAGCTGTGAGACTCAGTCTACAAGACCCTGATAATGAG < 41bp 1 0.623523549027576 1 0.899961709976196 experiment 0.752952901944848 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801172 chr7:44801161 stopgain 0.995 1 10 hm5C_associated_SNPs_40366 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:44801126-44801162
64251 chr22 44330508 44330508 1 + G A UCEC 44330489 + 44330469 44330509 41 GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTCGA GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTCAA < 41bp 1 0.705562376058036 1 0.711024463176727 experiment 0.588875247883929 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44330489 chr22:44330508 nonsynonymous SNV 0.377 0 40 hm5C_associated_SNPs_40367 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:44330467-44330510
64251 chr19 18306833 18306833 1 + G A UCEC 18306835 + 18306815 18306855 41 GTTCCTCTGACACCCCCAGGCTGTGTGGCCCTGGACACCCG GTTCCTCTGACACCCCCAAGCTGTGTGGCCCTGGACACCCG < 41bp 1 0.661079603033694 1 0.469802141189575 experiment 0.677840793932613 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18306835 chr19:18306833 nonsynonymous SNV 0.065 0 19 hm5C_associated_SNPs_40368 0 0 1 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:18306820-18306840
64251 chr7 150034702 150034702 1 + C T UCEC 150034708 + 150034688 150034728 41 GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT GGTACTCAGCTCTGTGGGCCCCACCTCTTCCTTCGTCTTCT < 41bp 1 0.225075190009986 1 0.0385165512561798 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034708 chr7:150034702 nonsynonymous SNV 0.001 0 15 hm5C_associated_SNPs_40369 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150034689-150034721
64251 chr11 126279211 126279211 1 + C A UCEC 126279193 + 126279173 126279213 41 GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCAATCCT GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCAATACT < 41bp 1 0.304489243704343 1 0.227927803993225 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126279193 chr11:126279211 nonsynonymous SNV 0.955 0 39 hm5C_associated_SNPs_40370 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:126279177-126279213
64251 chr2 10560057 10560057 1 + C T UCEC 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTCTTCCCCTATGGCGACGCTTCCAA < 41bp 1 0.135911609711531 1 0.103766471147537 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560057 synonymous SNV . 0 27 hm5C_associated_SNPs_40371 0 0 1 METAP2 POSTAR2 ENCODE chr2:10560056-10560107
64251 chr11 44129793 44129793 1 + C T UCEC 44129787 + 44129767 44129807 41 GAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTATCTCAC GAGACAGCACAAGCGATGGCCCAGCTTTCTAGGTATCTCAC < 41bp 1 0.101691251875938 1 0.104855865240097 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129787 chr11:44129793 synonymous SNV . 0 27 hm5C_associated_SNPs_40372 0 0 5 SND1 POSTAR2 ENCODE chr11:44129706-44129796
64251 chr20 30822393 30822393 1 + C T UCEC 30822376 + 30822356 30822396 41 CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCGGGAGCGGG CTGTGTCTCCTCCTTCACTGCCTTTGTGAAGCGGGAGTGGG < 41bp 1 0.0421335216529761 1 0.033073753118515 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POFUT1 ENSG00000101346 CDS Human protein_coding chr20:30822376 chr20:30822393 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_40375 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr20:30822383-30822420
64251 chr7 16737765 16737765 1 + C T UCEC 16737766 + 16737746 16737786 41 AATACTGCTACGACAACATCCATTTCATGAAAGCCTTTCAG AATACTGCTACGACAACATTCATTTCATGAAAGCCTTTCAG < 41bp 1 0.078791593376519 1 0.251858532428741 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BZW2 ENSG00000136261 CDS Human protein_coding chr7:16737766 chr7:16737765 synonymous SNV . 0 20 hm5C_associated_SNPs_40376 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:16737752-16737767
64251 chr16 30960768 30960768 1 + G A UCEC 30960753 + 30960733 30960773 41 CAGTCAGCACTCGCTGCGGGCGCTCAGCTGGCGCCGCCTCT CAGTCAGCACTCGCTGCGGGCGCTCAGCTGGCGCCACCTCT < 41bp 1 0.133214661494911 1 0.0840810835361481 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960753 chr16:30960768 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_40377 0 0 1 DDX3X POSTAR2 ENCODE chr16:30960706-30960782
64251 chr16 30960768 30960768 1 + G A UCEC 30960757 + 30960737 30960777 41 CAGCACTCGCTGCGGGCGCTCAGCTGGCGCCGCCTCTACCT CAGCACTCGCTGCGGGCGCTCAGCTGGCGCCACCTCTACCT < 41bp 1 0.688608281680682 1 0.438232570886612 experiment 0.622783436638637 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960757 chr16:30960768 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_40378 0 0 1 DDX3X POSTAR2 ENCODE chr16:30960706-30960782
64251 chr3 184037539 184037539 1 + G T UCEC 184037529 + 184037509 184037549 41 CAGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAA CAGTTTCCCACTGGCGTGGCCCCCACCCCATTTTTGATGAA < 41bp 1 0.350683360122021 1 0.1387899518013 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037529 chr3:184037539 nonsynonymous SNV 0.999 3 31 hm5C_associated_SNPs_40379 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184037538-184037578
64251 chr3 184037539 184037539 1 + G T UCEC 184037530 + 184037510 184037550 41 AGTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAAC AGTTTCCCACTGGCGTGGCCCCCACCCCATTTTTGATGAAC < 41bp 1 0.0800184198904789 1 0.0718062520027161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037530 chr3:184037539 nonsynonymous SNV 0.999 3 30 hm5C_associated_SNPs_40380 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184037538-184037578
64251 chr3 184037539 184037539 1 + G T UCEC 184037531 + 184037511 184037551 41 GTTTCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACC GTTTCCCACTGGCGTGGCCCCCACCCCATTTTTGATGAACC < 41bp 1 0.0813051534611872 1 0.154028058052063 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037531 chr3:184037539 nonsynonymous SNV 0.999 3 29 hm5C_associated_SNPs_40381 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184037538-184037578
64251 chr3 184037539 184037539 1 + G T UCEC 184037534 + 184037514 184037554 41 TCCCACTGGCGTGGCCCCCACCCCAGTTTTGATGAACCAGC TCCCACTGGCGTGGCCCCCACCCCATTTTTGATGAACCAGC < 41bp 1 0.604615912372382 1 0.493823975324631 experiment 0.790768175255237 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184037534 chr3:184037539 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_40382 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184037538-184037578
64251 chr11 988580 988580 1 + G A UCEC 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCAGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC < 41bp 1 0.732988198845452 1 0.50935822725296 experiment 0.534023602309096 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988580 nonsynonymous SNV 1.000 3 7 hm5C_associated_SNPs_40383 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:988569-988597
64251 chr14 20943223 20943223 1 + T C UCEC 20943217 + 20943197 20943237 41 GAGATAATTCAACCTGTGTCCTAGGTTTGGAGATCGTTTCC GAGATAATTCAACCTGTGTCCTAGGTCTGGAGATCGTTTCC < 41bp 1 0.438495400469362 1 0.166804909706116 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNP ENSG00000198805 CDS Human protein_coding chr14:20943217 chr14:20943223 nonsynonymous SNV 1.000 5 27 hm5C_associated_SNPs_40384 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20943220-20943260
64251 chr16 70500150 70500150 1 + T C UCEC 70500158 + 70500138 70500178 41 TGCTGGACATCATGACCTATCGGGTGAGGCTGGGTGGTGGC TGCTGGACATCACGACCTATCGGGTGAGGCTGGGTGGTGGC < 41bp 1 0.782107591953654 1 0.860895276069641 experiment 0.435784816092691 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70500158 chr16:70500150 nonsynonymous SNV 0.989 2 13 hm5C_associated_SNPs_40391 0 0 4 DDX24 POSTAR2 ENCODE chr16:70500038-70500174
64251 chr8 21859735 21859735 1 + C T UCEC 21859721 + 21859701 21859741 41 CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGCGACCGC CCAAGAAGAGGACCACACCCCTGAACCAGGAGAGTGACCGC < 41bp 1 0.719634390788567 1 0.837792336940765 experiment 0.560731218422867 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859721 chr8:21859735 synonymous SNV . 0 35 hm5C_associated_SNPs_40392 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:21859713-21859756
64251 chr18 9525736 9525736 1 + T C UCEC 9525724 + 9525704 9525744 41 CATTTGCTTTCTAGGAGTTTCTTTTGAATTGTTTACATCGA CATTTGCTTTCTAGGAGTTTCTTTTGAATTGTCTACATCGA < 41bp 1 0.0570318857717621 1 0.183971703052521 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9525724 chr18:9525736 synonymous SNV . 0 33 hm5C_associated_SNPs_40393 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:9525720-9525740
64251 chr11 65156957 65156957 1 + G A UCEC 65156938 + 65156918 65156958 41 CACCGCGCTGTCCGCGAGGTCCTGCAGCTTCCAGACATCGC CACCGCGCTGTCCGCGAGGTCCTGCAGCTTCCAGACATCAC < 41bp 1 0.0738062428583432 1 0.0940438807010651 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65156938 chr11:65156957 nonsynonymous SNV 0.061 4 40 hm5C_associated_SNPs_40394 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr11:65156936-65156962
64251 chr1 1425665 1425665 1 + C T UCEC 1425666 + 1425646 1425686 41 GGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCA GGTCCTGGCCAGCAATCTGTCTGAGCAGTTCGACTGTGCCA < 41bp 1 0.672996362285231 1 0.421069860458374 experiment 0.654007275429538 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1425666 chr1:1425665 nonsynonymous SNV 0.004 5 20 hm5C_associated_SNPs_40395 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1425635-1425673
64251 chr22 24236700 24236700 1 + C T UCEC 24236718 + 24236698 24236738 41 GCCTCCGTGCCGGACGGGTTCCTCTCCGAGCTCACCCAGCA GCTTCCGTGCCGGACGGGTTCCTCTCCGAGCTCACCCAGCA < 41bp 1 0.185118324193175 1 0.0489819943904877 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MIF ENSG00000240972 CDS Human protein_coding chr22:24236718 chr22:24236700 synonymous SNV . 0 3 hm5C_associated_SNPs_40396 0 0 46 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:24236560-24236740
64251 chr1 201938664 201938664 1 + C T UCEC 201938644 + 201938624 201938664 41 AGTTGCCTTCAACTCAGTTACCTTCCTCACCTTTTGGAGAC AGTTGCCTTCAACTCAGTTACCTTCCTCACCTTTTGGAGAT < 41bp 1 0.082895962740545 1 0.0570549070835114 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIMM17A ENSG00000134375 CDS Human protein_coding chr1:201938644 chr1:201938664 synonymous SNV . 0 41 hm5C_associated_SNPs_40397 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:201938614-201938692
64251 chr1 154304467 154304467 1 + G A UCEC 154304485 + 154304465 154304505 41 TGGGCTGTGTTACATAGAGACAGCAGAACTTGATGGGTAAG TGAGCTGTGTTACATAGAGACAGCAGAACTTGATGGGTAAG < 41bp 1 0.639049301793176 1 0.388315707445145 experiment 0.721901396413649 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154304485 chr1:154304467 nonsynonymous SNV 0.989 4 3 hm5C_associated_SNPs_40398 0 0 4 DDX24 POSTAR2 ENCODE chr1:154304433-154304496
64251 chr3 136665009 136665009 1 + C T UCEC 136664991 + 136664971 136665011 41 GTTTGGAACCATCACCTCCACAGTGTGATTACATTAGGCCT GTTTGGAACCATCACCTCCACAGTGTGATTACATTAGGTCT < 41bp 1 0.564115823559856 1 0.24558824300766 experiment 0.871768352880288 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664991 chr3:136665009 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_40399 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:136664997-136665026
64251 chr12 112893766 112893766 1 + A G UCEC 112893754 + 112893734 112893774 41 CAACTGCTGTACTCGATCAGCCCCTTAACACGACTCGTATA CAACTGCTGTACTCGATCAGCCCCTTAACACGGCTCGTATA < 41bp 1 0.0951418769742557 1 0.0536753237247467 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112893754 chr12:112893766 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_40400 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr12:112893759-112893799
64251 chr11 60704148 60704148 1 + C T UCEC 60704142 + 60704122 60704162 41 GGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGC GGCCCTCCTGGGGGCACCACCAGCTCTTCAAGCACCCTGGC < 41bp 1 0.633179746991793 1 0.851531982421875 experiment 0.733640506016413 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60704142 chr11:60704148 synonymous SNV . 0 27 hm5C_associated_SNPs_40401 0 0 1 NOL12 POSTAR2 ENCODE chr11:60704075-60704149
64251 chr2 37458865 37458865 1 + G T UCEC 37458880 + 37458860 37458900 41 GCTGAGGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG GCTGATGTCAGGTTTGGGGCCGTTGTGTGCCGTGGCGCGCG < 41bp 1 0.561096198548319 1 0.137193262577057 experiment 0.877807602903362 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458880 chr2:37458865 nonsynonymous SNV 0.004 1 6 hm5C_associated_SNPs_40402 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:37458839-37458870
64251 chr11 65270889 65270889 1 + A C UCEC 65270875 + 65270855 65270895 41 TAGTACACTTCACTCAGAGGCATTTGCATCTTTAAATAATT TAGTACACTTCACTCAGAGGCATTTGCATCTTTACATAATT < 41bp 1 0.0449644657603513 1 0.167975783348083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65270875 chr11:65270889 . . 0 35 hm5C_associated_SNPs_40403 0 0 124 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65270780-65270900
64251 chr9 37430589 37430589 1 + A G UCEC 37430599 + 37430579 37430619 41 GGACTCTGCAACAAGGACTTCTTCCAGAAGATGAAGGAAAC GGACTCTGCAGCAAGGACTTCTTCCAGAAGATGAAGGAAAC < 41bp 1 0.102700254680802 1 0.151582390069962 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37430599 chr9:37430589 nonsynonymous SNV 0.999 1 11 hm5C_associated_SNPs_40404 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:37430554-37430589
64251 chr19 45573289 45573289 1 + A C UCEC 45573290 + 45573270 45573310 41 GCCTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAGAGAGAA GCCTTCGCAGGGAGCGGGACCGCCGAGAGAAGGAGAGAGAA < 41bp 1 0.661316053761101 1 0.39231339097023 experiment 0.677367892477798 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLASRP ENSG00000104859 CDS Human protein_coding chr19:45573290 chr19:45573289 nonsynonymous SNV 0.989 3 20 hm5C_associated_SNPs_40405 0 0 17 BUD13 POSTAR2 ENCODE chr19:45573271-45573363
64251 chr19 45573289 45573289 1 + A C UCEC 45573292 + 45573272 45573312 41 CTTCGCAGGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGA CTTCGCAGGGAGCGGGACCGCCGAGAGAAGGAGAGAGAAGA < 41bp 1 0.456283603241897 1 0.529541909694672 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLASRP ENSG00000104859 CDS Human protein_coding chr19:45573292 chr19:45573289 nonsynonymous SNV 0.989 3 18 hm5C_associated_SNPs_40406 0 0 17 BUD13 POSTAR2 ENCODE chr19:45573271-45573363
64251 chr7 5336821 5336821 1 + G A UCEC 5336820 + 5336800 5336840 41 CACGACGTTGTCGCCGGGGACGTCCACTTCGTAAGTGCGCA CACGACGTTGTCGCCGGGGACATCCACTTCGTAAGTGCGCA < 41bp 1 0.0623177701615038 1 0.0926669538021088 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5336820 chr7:5336821 nonsynonymous SNV 0.191 0 22 hm5C_associated_SNPs_40407 0 0 1 BUD13 POSTAR2 ENCODE chr7:5336813-5336826
64251 chr14 39650867 39650867 1 + C T UCEC 39650849 + 39650829 39650869 41 GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGG GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATTGG < 41bp 1 0.692615971835209 1 0.104497283697128 experiment 0.614768056329582 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650849 chr14:39650867 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_40411 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr10 102684002 102684002 1 + C A UCEC 102684010 + 102683990 102684030 41 ATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGAC ATTCTGGCAATTATGGCCACCATTCTACCAGGAATAGTGAC < 41bp 1 0.0268079221987139 1 0.242414683103561 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684010 chr10:102684002 nonsynonymous SNV 0.951 3 13 hm5C_associated_SNPs_40412 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:102684000-102684020
64251 chr7 150725691 150725691 1 + C A UCEC 150725672 + 150725652 150725692 41 GCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGCT GCAGGCTGCTACCGCCCCTCCGCTTCCAGACATTCTCAGAT < 41bp 1 0.14745959888176 1 0.189962476491928 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150725672 chr7:150725691 nonsynonymous SNV 0.950 3 40 hm5C_associated_SNPs_40413 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:150725659-150725695
64251 chr16 22337546 22337546 1 + C T UCEC 22337560 + 22337540 22337580 41 TCGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTG TCGGACTGCATGCTACAGGACACGGTGCTGGCCGCCGGTTG < 41bp 1 0.733698340571862 1 0.203777283430099 experiment 0.532603318856275 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337560 chr16:22337546 nonsynonymous SNV 0.474 2 7 hm5C_associated_SNPs_40414 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:22337538-22337560
64251 chr7 94293201 94293201 1 + C A UCEC 94293216 + 94293196 94293236 41 GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG GATTTATCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG < 41bp 1 0.205363610081244 1 0.0399128198623657 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293216 chr7:94293201 nonsynonymous SNV 0.977 3 6 hm5C_associated_SNPs_40415 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94293155-94293231
64251 chr1 100757032 100757032 1 + G T UCEC 100757044 + 100757024 100757064 41 ATGCCAAGGAATTGGGATGACAAATCCAAATCTATAGAGTA ATGCCAAGTAATTGGGATGACAAATCCAAATCTATAGAGTA < 41bp 1 0.246406477252675 1 0.428323566913605 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100757044 chr1:100757032 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_40416 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:100757024-100757100
64251 chr7 101840361 101840361 1 + C T UCEC 101840378 + 101840358 101840398 41 TCGCCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATC TCGTCCGGCAGGTCAAAGAGCAGCTGATTAAGCACAATATC < 41bp 1 0.136531356084057 1 0.099119246006012 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101840378 chr7:101840361 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_40417 0 0 3 BUD13 POSTAR2 ENCODE chr7:101840321-101840365
64251 chr19 17450311 17450311 1 + G A UCEC 17450306 + 17450286 17450326 41 CCGTGACGTGCTGGAGACCCCAGTCGACCTGGCCGGATTTC CCGTGACGTGCTGGAGACCCCAGTCAACCTGGCCGGATTTC < 41bp 1 0.265046606973203 1 0.797943711280823 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450306 chr19:17450311 nonsynonymous SNV 0.970 1 26 hm5C_associated_SNPs_40418 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:17450275-17450328
64251 chr1 31899647 31899647 1 + G A UCEC 31899651 + 31899631 31899671 41 TGTCTGCGTGTCCATCGCTGCTGTCCTGCCCAAGGTCCAGG TGTCTGCGTGTCCATCACTGCTGTCCTGCCCAAGGTCCAGG < 41bp 1 0.171000739696717 1 0.0246924161911011 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31899651 chr1:31899647 nonsynonymous SNV 0.103 1 17 hm5C_associated_SNPs_40419 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:31899626-31899658
64251 chr20 44571766 44571766 1 + G A UCEC 44571747 + 44571727 44571767 41 GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCGC GTCCTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCAC < 41bp 1 0.396471336122454 1 0.451240628957748 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571747 chr20:44571766 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_40420 0 0 1 PPIG POSTAR2 ENCODE chr20:44571752-44571784
64251 chr3 49720123 49720123 1 + G A UCEC 49720112 + 49720092 49720132 41 GACCTACAGGGCCTGCGTGGCCCGGAACCCCGTGATCAACA GACCTACAGGGCCTGCGTGGCCCGGAACCCCATGATCAACA < 41bp 1 0.499217720944396 1 0.0811667740345001 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49720112 chr3:49720123 nonsynonymous SNV 0.906 4 32 hm5C_associated_SNPs_40421 0 0 1 LIN28B POSTAR2 ENCODE chr3:49720068-49720164
64251 chr13 24858311 24858311 1 + G A UCEC 24858291 + 24858271 24858311 41 AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGG AGTTTCTTCAGATGGAGGTACTGAGCCCTCTGCCTTAGTGA < 41bp 1 0.133959343523424 1 0.227043569087982 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24858291 chr13:24858311 nonsynonymous SNV 0.757 3 41 hm5C_associated_SNPs_40422 0 0 1 DGCR8 POSTAR2 ENCODE chr13:24858286-24858317
64251 chr22 39773683 39773683 1 + G A UCEC 39773703 + 39773683 39773723 41 GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGC AGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGC < 41bp 1 0.466476466782069 1 0.457827299833298 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39773703 chr22:39773683 synonymous SNV . 0 1 hm5C_associated_SNPs_40423 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:39773671-39773709
64251 chr5 137756543 137756543 1 + C T UCEC 137756528 + 137756508 137756548 41 CTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAGG CTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACTGAAGG < 41bp 1 0.615989136826115 1 0.960862159729004 experiment 0.768021726347769 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KDM3B ENSG00000120733 CDS Human protein_coding chr5:137756528 chr5:137756543 synonymous SNV . 0 36 hm5C_associated_SNPs_40427 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:137756518-137756544
64251 chr8 145166354 145166354 1 + C T UCEC 145166334 + 145166314 145166354 41 TGTCCCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTC TGTCCCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTT < 41bp 1 0.0196379258401963 1 0.0242067873477936 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166334 chr8:145166354 nonsynonymous SNV 0.000 1 41 hm5C_associated_SNPs_40428 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr8 145166354 145166354 1 + C T UCEC 145166335 + 145166315 145166355 41 GTCCCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTCG GTCCCTGTTTGCAGCGAGGCCTTGTCTCTCATCCATCGTTG < 41bp 1 0.189185872441953 1 0.0342593789100647 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166335 chr8:145166354 nonsynonymous SNV 0.000 1 40 hm5C_associated_SNPs_40429 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr8 145166354 145166354 1 + C T UCEC 145166367 + 145166347 145166387 41 CCATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGG CCATCGTTGGAGGGCAACATCTCAGCACCTGGTGCCGAAGG < 41bp 1 0.494008231401671 1 0.486054748296738 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166367 chr8:145166354 nonsynonymous SNV 0.000 1 8 hm5C_associated_SNPs_40430 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chr8 145166354 145166354 1 + C T UCEC 145166369 + 145166349 145166389 41 ATCGTCGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAG ATCGTTGGAGGGCAACATCTCAGCACCTGGTGCCGAAGGAG < 41bp 1 0.649559953258314 1 0.768209099769592 experiment 0.700880093483372 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145166369 chr8:145166354 nonsynonymous SNV 0.000 1 6 hm5C_associated_SNPs_40431 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:145166339-145166452
64251 chrX 69699038 69699038 1 + G A UCEC 69699058 + 69699038 69699078 41 GAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTC AAACAAATGATGAACAGCAGCATGAGCTCTGGGTCTGGGTC < 41bp 1 0.40131496208458 1 0.231824815273285 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DLG3 ENSG00000082458 CDS Human protein_coding chrX:69699058 chrX:69699038 nonsynonymous SNV 0.998 3 1 hm5C_associated_SNPs_40432 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:69699006-69699049
64251 chr9 137323821 137323821 1 + G A UCEC 137323830 + 137323810 137323850 41 GCTGCCTGCGCGCCATCGTCCTCTTTAACCCTGGTATGGCC GCTGCCTGCGCACCATCGTCCTCTTTAACCCTGGTATGGCC < 41bp 1 0.078593389067754 1 0.217974811792374 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RXRA ENSG00000186350 CDS Human protein_coding chr9:137323830 chr9:137323821 nonsynonymous SNV 0.835 3 12 hm5C_associated_SNPs_40435 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:137323819-137323842
64251 chr1 36026171 36026171 1 + G A UCEC 36026179 + 36026159 36026199 41 TCCTCACAGCCCGGGGGGACCCGGACGATGCTGCCCGCCGC TCCTCACAGCCCAGGGGGACCCGGACGATGCTGCCCGCCGC < 41bp 1 0.693946402434391 1 0.767261028289795 experiment 0.612107195131219 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NCDN ENSG00000020129 CDS Human protein_coding chr1:36026179 chr1:36026171 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_40436 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:36026149-36026182
64251 chr17 8172163 8172163 1 + C T UCEC 8172177 + 8172157 8172197 41 GGAGTGCGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG GGAGTGTGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG < 41bp 1 0.523639284238333 1 0.774538099765778 experiment 0.952721431523334 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172177 chr17:8172163 nonsynonymous SNV 0.146 4 7 hm5C_associated_SNPs_40437 0 0 2 EIF3H POSTAR2 ENCODE chr17:8172078-8172166
64251 chr15 90159688 90159688 1 + G A UCEC 90159672 + 90159652 90159692 41 GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCT GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAAATCT < 41bp 1 0.725696832881193 1 0.849017024040222 experiment 0.548606334237615 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TICRR ENSG00000140534 CDS Human protein_coding chr15:90159672 chr15:90159688 synonymous SNV . 0 37 hm5C_associated_SNPs_40438 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:90159636-90159691
64251 chr19 18960987 18960987 1 + C T UCEC 18961004 + 18960984 18961024 41 TGTCGCAACGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC TGTTGCAACGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC < 41bp 1 0.601534915336552 1 0.820359945297241 experiment 0.796930169326896 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961004 chr19:18960987 nonsynonymous SNV 0.996 5 4 hm5C_associated_SNPs_40440 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:18960960-18961000
64251 chr15 75190031 75190031 1 + C T UCEC 75190039 + 75190019 75190059 41 AGCTTACTGAGCCGAAGGACCTGCTGATATTCCGTGCCTGC AGCTTACTGAGCTGAAGGACCTGCTGATATTCCGTGCCTGC < 41bp 1 0.602907386196278 1 0.0920759439468384 experiment 0.794185227607445 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MPI ENSG00000178802 CDS Human protein_coding chr15:75190039 chr15:75190031 nonsynonymous SNV 0.369 1 13 hm5C_associated_SNPs_40442 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:75190000-75190048
64251 chr7 36445878 36445878 1 + G A UCEC 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAGACCTCTGCTTTCAAATGCCTCAGCAACTCCAG < 41bp 1 0.598410452413032 1 0.440418154001236 experiment 0.803179095173935 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445878 synonymous SNV . 0 31 hm5C_associated_SNPs_40443 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr15 75499554 75499554 1 + G A UCEC 75499548 + 75499528 75499568 41 ATGCCCGGGATGACCTCTCTCTCTATGGAGCATCCCCTGGG ATGCCCGGGATGACCTCTCTCTCTATAGAGCATCCCCTGGG < 41bp 1 0.700615365526096 1 0.923536658287048 experiment 0.598769268947808 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75499548 chr15:75499554 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_40444 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:75499517-75499585
64251 chr5 140789633 140789633 1 + C T UCEC 140789623 + 140789603 140789643 41 AGTGAGCCCGGACTCTTCAGCCTGGGGCTGCGCACTGGGGA AGTGAGCCCGGACTCTTCAGCCTGGGGCTGTGCACTGGGGA < 41bp 1 0.224558311071616 1 0.419680058956146 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCDHGB6 ENSG00000253305 CDS Human protein_coding chr5:140789623 chr5:140789633 nonsynonymous SNV 0.987 2 31 hm5C_associated_SNPs_40445 0 0 1 QKI POSTAR2 GSE21578,GSM545211 chr5:140789613-140789645
64251 chr19 17213058 17213058 1 + G A UCEC 17213070 + 17213050 17213090 41 ATCTACACGTACGCGGGGAGCATCCTGGTGGCCATCAACCC ATCTACACATACGCGGGGAGCATCCTGGTGGCCATCAACCC < 41bp 1 0.0441979862248731 1 0.0499530136585236 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17213070 chr19:17213058 synonymous SNV . 0 9 hm5C_associated_SNPs_40446 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:17213058-17213097
64251 chr5 82834292 82834292 1 + C A UCEC 82834308 + 82834288 82834328 41 CACTCTCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG CACTATCCCACGTAGTCCTGCCTCTGTCTTTATGGAGCAGG < 41bp 1 0.0200948490819461 1 0.0430594086647034 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834308 chr5:82834292 nonsynonymous SNV 0.006 0 5 hm5C_associated_SNPs_40447 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:82834260-82834295
64251 chr12 124074935 124074935 1 + G A UCEC 124074928 + 124074908 124074948 41 AGAAATGATCAATGAGCTAGCAGTGGCGATGACAGCTGTAA AGAAATGATCAATGAGCTAGCAGTGGCAATGACAGCTGTAA < 41bp 1 0.619061278228202 1 0.238054186105728 experiment 0.761877443543596 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED2 ENSG00000086598 CDS Human protein_coding chr12:124074928 chr12:124074935 synonymous SNV . 0 28 hm5C_associated_SNPs_40448 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:124074899-124074965
64251 chr11 63997020 63997020 1 + G A UCEC 63997000 + 63996980 63997020 41 GCACTACCTGAGTGGGGGACCCGAGGCCCACGAGTCTACAG GCACTACCTGAGTGGGGGACCCGAGGCCCACGAGTCTACAA < 41bp 1 0.442946484921878 1 0.903941631317139 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63997000 chr11:63997020 nonsynonymous SNV 0.995 2 41 hm5C_associated_SNPs_40450 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63997018-63997039
64251 chr19 34949762 34949762 1 + C T UCEC 34949745 + 34949725 34949765 41 GCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGCCAG GCACTGGATCCTCCCAACCCCAATTGTTATGTATGTGTCAG < 41bp 1 0.302759449701807 1 0.0615058541297913 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34949745 chr19:34949762 nonsynonymous SNV 0.999 2 38 hm5C_associated_SNPs_40451 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr19:34949731-34949824
64251 chr19 13051182 13051182 1 + G T UCEC 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACGATTGGGACTTCCTGCCACCCAATAAGATAAAG < 41bp 1 0.380070262726152 1 0.334476470947266 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051182 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_40452 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051182 13051182 1 + G T UCEC 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTGCCACCCAATAAGATAAAGGATC < 41bp 1 0.330525988592263 1 0.236082434654236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051182 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_40453 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr7 102995365 102995365 1 + G T UCEC 102995366 + 102995346 102995386 41 AAGTTGAAGATGACATTCAGCAACTTCTCAAGAAAATTAAT AAGTTGAAGATGACATTCATCAACTTCTCAAGAAAATTAAT < 41bp 1 0.36773899557017 1 0.206171542406082 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSMC2 ENSG00000161057 CDS Human protein_coding chr7:102995366 chr7:102995365 nonsynonymous SNV 0.993 3 20 hm5C_associated_SNPs_40454 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:102995330-102995388
64251 chr19 46025457 46025457 1 + C T UCEC 46025465 + 46025445 46025485 41 GAGCACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCA GAGCACATAGAGTGCCGGGTCTCCAATGCAGGTGATGCTCA < 41bp 1 0.752847486494706 1 0.899353981018066 experiment 0.494305027010588 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025465 chr19:46025457 nonsynonymous SNV 0.864 3 13 hm5C_associated_SNPs_40455 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025457 46025457 1 + C T UCEC 46025467 + 46025447 46025487 41 GCACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGA GCACATAGAGTGCCGGGTCTCCAATGCAGGTGATGCTCAGA < 41bp 1 0.217327105596368 1 0.657998204231262 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025467 chr19:46025457 nonsynonymous SNV 0.864 3 11 hm5C_associated_SNPs_40456 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025457 46025457 1 + C T UCEC 46025468 + 46025448 46025488 41 CACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGAT CACATAGAGTGCCGGGTCTCCAATGCAGGTGATGCTCAGAT < 41bp 1 0.297558469539324 1 0.295038133859634 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025468 chr19:46025457 nonsynonymous SNV 0.864 3 10 hm5C_associated_SNPs_40457 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr1 7796548 7796548 1 + C A UCEC 7796544 + 7796524 7796564 41 TTCCGCGGAATGACCCTACTCCACCTGGCCGCTGCCCAGGG TTCCGCGGAATGACCCTACTCCACATGGCCGCTGCCCAGGG < 41bp 1 0.644925796533164 1 0.659603476524353 experiment 0.710148406933673 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMTA1 ENSG00000171735 CDS Human protein_coding chr1:7796544 chr1:7796548 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_40458 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:7796533-7796565
64251 chr10 104160777 104160777 1 + C T UCEC 104160790 + 104160770 104160810 41 GGGTACCCGACCCTCACCCGCCTCCTTCTGAAGGCTGGTCA GGGTACCTGACCCTCACCCGCCTCCTTCTGAAGGCTGGTCA < 41bp 1 0.0590020246678362 1 0.122570902109146 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160790 chr10:104160777 nonsynonymous SNV 0.105 3 8 hm5C_associated_SNPs_40460 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:104160757-104160788
64251 chr9 37486782 37486782 1 + G A UCEC 37486792 + 37486772 37486812 41 CCAACCCCAGGAAGAGGAATCAACGGATCCTGGTAAGTGAA CCAACCCCAGAAAGAGGAATCAACGGATCCTGGTAAGTGAA < 41bp 1 0.531228705325423 1 0.700987994670868 experiment 0.937542589349154 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486792 chr9:37486782 synonymous SNV . 0 11 hm5C_associated_SNPs_40461 0 0 2 BUD13 POSTAR2 ENCODE chr9:37486763-37486795
64251 chrX 215919 215919 1 + A C UCEC 215918 + 215898 215938 41 GGGCCGGGTTCACGGTGCACCAACATCATCGCGGGGGACTT GGGCCGGGTTCACGGTGCACCCACATCATCGCGGGGGACTT < 41bp 1 0.299823300637473 1 0.151651054620743 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:215918 chrX:215919 nonsynonymous SNV 0.250 4 22 hm5C_associated_SNPs_40463 0 0 2 GRWD1 POSTAR2 ENCODE chrX:215913-215953
64251 chrX 73041049 73041049 1 - C T UCEC 73041069 - 73041049 73041089 41 AGTATGATTGGTGGAGGGAGCAAGGTTGAAGATAATCTGGG AGTATGATTGGTGGAGGGAGCAAGGTTGAAGATAATCTGGA < 41bp 1 0.423006435881177 1 0.866894125938416 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041069 chrX:73041049 . . 0 41 hm5C_associated_SNPs_40464 0 0 62 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:73040437-73041094
64251 chr20 34458934 34458934 1 + G A UCEC 34458925 + 34458905 34458945 41 AAACACTGACAAAGACTTATCGAGGAGACGTTCCTCCAGGC AAACACTGACAAAGACTTATCGAGGAGACATTCCTCCAGGC < 41bp 1 0.78393722660342 1 0.966600716114044 experiment 0.43212554679316 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF20 ENSG00000025293 CDS Human protein_coding chr20:34458925 chr20:34458934 nonsynonymous SNV 1.000 3 30 hm5C_associated_SNPs_40465 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr20:34458918-34458965
64251 chr1 32626270 32626270 1 + G A UCEC 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACATCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA < 41bp 1 0.151180807237093 1 0.515235185623169 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626270 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_40466 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32626227-32626297
64251 chr6 160477510 160477510 1 + A G UCEC 160477524 + 160477504 160477544 41 CTGTGGAACACAGAGGCTGCCTGTCCCATTCAGACAACGAC CTGTGGGACACAGAGGCTGCCTGTCCCATTCAGACAACGAC < 41bp 1 0.0339478267160762 1 0.0927111208438873 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160477524 chr6:160477510 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_40467 0 0 2 EIF3H POSTAR2 ENCODE chr6:160477487-160477545
64251 chr7 101891775 101891775 1 + C T UCEC 101891755 + 101891735 101891775 41 GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGC GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGT < 41bp 1 0.592622786353463 1 0.725315749645233 experiment 0.814754427293074 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891755 chr7:101891775 nonsynonymous SNV 0.753 1 41 hm5C_associated_SNPs_40469 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891775 101891775 1 + C T UCEC 101891757 + 101891737 101891777 41 GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCC GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGTCC < 41bp 1 0.323822489140076 1 0.615172863006592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891757 chr7:101891775 nonsynonymous SNV 0.753 1 39 hm5C_associated_SNPs_40470 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891775 101891775 1 + C T UCEC 101891758 + 101891738 101891778 41 AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCCG AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGTCCG < 41bp 1 0.652264352385818 1 0.738117098808289 experiment 0.695471295228363 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891758 chr7:101891775 nonsynonymous SNV 0.753 1 38 hm5C_associated_SNPs_40471 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr19 16957826 16957826 1 + G A UCEC 16957840 + 16957820 16957860 41 ATGTCTGAAGAGGAGGTGTTCACCGAGGTGGCCAACCTCTT ATGTCTAAAGAGGAGGTGTTCACCGAGGTGGCCAACCTCTT < 41bp 1 0.626164992190361 1 0.0892076790332794 experiment 0.747670015619278 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SIN3B ENSG00000127511 CDS Human protein_coding chr19:16957840 chr19:16957826 nonsynonymous SNV 0.986 4 7 hm5C_associated_SNPs_40472 0 0 2 PPIG POSTAR2 ENCODE chr19:16957789-16957914
64251 chr12 31244706 31244706 1 + G A UCEC 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCAG < 41bp 1 0.580839120111733 1 0.407399833202362 experiment 0.838321759776535 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244706 synonymous SNV . 0 40 hm5C_associated_SNPs_40475 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr12 31244706 31244706 1 + G A UCEC 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCAGGCAT < 41bp 1 0.223781684703242 1 0.0879677832126617 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244706 synonymous SNV . 0 36 hm5C_associated_SNPs_40476 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr11 67818122 67818122 1 + G A UCEC 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCAGC < 41bp 1 0.0353409385244024 1 0.530366957187653 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818122 nonsynonymous SNV 0.985 5 39 hm5C_associated_SNPs_40477 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818122 67818122 1 + G A UCEC 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCAGCT < 41bp 1 0.140801121905097 1 0.572798311710358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818122 nonsynonymous SNV 0.985 5 38 hm5C_associated_SNPs_40478 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr16 57486784 57486784 1 + C T UCEC 57486774 + 57486754 57486794 41 GTGAGGAGCAGTTGCAGCACCGCATCCTGACGGCAGCCCTT GTGAGGAGCAGTTGCAGCACCGCATCCTGATGGCAGCCCTT < 41bp 1 0.567949702770871 1 0.835696697235107 experiment 0.864100594458259 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57486774 chr16:57486784 nonsynonymous SNV 0.992 2 31 hm5C_associated_SNPs_40479 0 0 4 BUD13 POSTAR2 ENCODE chr16:57486763-57486834
64251 chr1 46073351 46073351 1 + A G UCEC 46073334 + 46073314 46073354 41 CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCAGAGAAAAA CAGTTTCTGGAACTGATGTCCAAGAAGAGTGCAGAGAGAAA < 41bp 1 0.6333465790391 1 0.777227640151978 experiment 0.7333068419218 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46073334 chr1:46073351 synonymous SNV . 0 38 hm5C_associated_SNPs_40480 0 0 15 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr1:46073340-46073360
64251 chr16 16228273 16228273 1 + G A UCEC 16228293 + 16228273 16228313 41 GAGTCTGCCGAAGGAGAGATCATCATCGATGGCATCAACAT AAGTCTGCCGAAGGAGAGATCATCATCGATGGCATCAACAT < 41bp 1 0.309688603530286 1 0.0479081571102142 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16228293 chr16:16228273 nonsynonymous SNV 0.232 4 1 hm5C_associated_SNPs_40481 0 0 1 YBX3 POSTAR2 ENCODE chr16:16228269-16228298
64251 chr8 37630316 37630316 1 + G A UCEC 37630300 + 37630280 37630320 41 CAATCTCTTCATGCTGGAAACAGTGGATTCTGTGAAGTTGG CAATCTCTTCATGCTGGAAACAGTGGATTCTGTGAAATTGG < 41bp 1 0.38974052829615 1 0.36532798409462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLPBP ENSG00000147471 CDS Human protein_coding chr8:37630300 chr8:37630316 synonymous SNV . 0 37 hm5C_associated_SNPs_40482 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:37630299-37630325
64251 chr2 27663359 27663359 1 + G T UCEC 27663350 + 27663330 27663370 41 TGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAG TGGCTGAAATCCCTGCAGGACCAGGAAGATAACCAGTTCAG < 41bp 1 0.297396112177935 1 0.373118698596954 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27663350 chr2:27663359 stopgain 1.000 1 30 hm5C_associated_SNPs_40483 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:27663327-27663365
64251 chr19 48259044 48259044 1 + A C UCEC 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GCGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC < 41bp 1 0.288162272718929 1 0.0391319394111633 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259044 nonsynonymous SNV 0.912 2 2 hm5C_associated_SNPs_40484 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr2 224824286 224824286 1 + T C UCEC 224824275 + 224824255 224824295 41 GAGAAGCCGAACTGGGATTACCATGCAGAAATACAAGCTTT GAGAAGCCGAACTGGGATTACCATGCAGAAACACAAGCTTT < 41bp 1 0.144846422359802 1 0.11884731054306 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824275 chr2:224824286 nonsynonymous SNV 0.992 1 32 hm5C_associated_SNPs_40485 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:224824253-224824302
64251 chr14 75190034 75190034 1 + C T UCEC 75190025 + 75190005 75190045 41 CTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTA CTGAAATTGAGAAATTGGGGCAGAAGTATTGAGTGGCTCTA < 41bp 1 0.691330869318754 1 0.318928927183151 experiment 0.617338261362493 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCF1 ENSG00000119616 CDS Human protein_coding chr14:75190025 chr14:75190034 stopgain 0.996 1 30 hm5C_associated_SNPs_40486 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:75189981-75190044
64251 chr3 48506023 48506023 1 + C A UCEC 48506024 + 48506004 48506044 41 TGGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACT TGGTGTGCAGAGCCCCTTGACCCCAGTCACTGGCTCCAACT < 41bp 1 0.435559684230533 1 0.146697968244553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506024 chr3:48506023 nonsynonymous SNV 0.133 0 20 hm5C_associated_SNPs_40487 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506023 48506023 1 + C A UCEC 48506025 + 48506005 48506045 41 GGTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTG GGTGTGCAGAGCCCCTTGACCCCAGTCACTGGCTCCAACTG < 41bp 1 0.320997948071216 1 0.0562755763530731 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506025 chr3:48506023 nonsynonymous SNV 0.133 0 19 hm5C_associated_SNPs_40488 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506023 48506023 1 + C A UCEC 48506026 + 48506006 48506046 41 GTGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGC GTGTGCAGAGCCCCTTGACCCCAGTCACTGGCTCCAACTGC < 41bp 1 0.372121591132674 1 0.128726005554199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506026 chr3:48506023 nonsynonymous SNV 0.133 0 18 hm5C_associated_SNPs_40489 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chr3 48506023 48506023 1 + C A UCEC 48506027 + 48506007 48506047 41 TGTGCAGAGCCCCTTGCCCCCAGTCACTGGCTCCAACTGCC TGTGCAGAGCCCCTTGACCCCAGTCACTGGCTCCAACTGCC < 41bp 1 0.27574128557978 1 0.106598377227783 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATRIP ENSG00000164053 CDS Human protein_coding chr3:48506027 chr3:48506023 nonsynonymous SNV 0.133 0 17 hm5C_associated_SNPs_40490 0 0 1 BUD13 POSTAR2 ENCODE chr3:48505986-48506043
64251 chrX 40996133 40996133 1 + T C UCEC 40996126 + 40996106 40996146 41 AGTTGTCCCAAGACTGGTTTCCACTTTTAGAACTTCTTGCC AGTTGTCCCAAGACTGGTTTCCACTTTCAGAACTTCTTGCC < 41bp 1 0.144684363359488 1 0.246008932590485 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:40996126 chrX:40996133 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_40498 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:40996068-40996152
64251 chr1 120286620 120286620 1 + C T UCEC 120286600 + 120286580 120286620 41 CACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGAAGC CACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGAAGT < 41bp 1 0.312351715071715 1 0.199296563863754 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286600 chr1:120286620 nonsynonymous SNV 0.965 1 41 hm5C_associated_SNPs_40500 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:120286585-120286631
64251 chr5 72182956 72182956 1 + C T UCEC 72182950 + 72182930 72182970 41 CAAATGTGTATCGTGATGAACTGCTGCCACATATTTTGCCC CAAATGTGTATCGTGATGAACTGCTGTCACATATTTTGCCC < 41bp 1 0.539658534960911 1 0.0916528701782227 experiment 0.920682930078179 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72182950 chr5:72182956 nonsynonymous SNV 0.932 2 27 hm5C_associated_SNPs_40501 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:72182899-72182970
64251 chr11 125475564 125475564 1 + G A UCEC 125475549 + 125475529 125475569 41 GCCATCTTTTGCATGCTACTCACCTACTACATGTGGATCAA GCCATCTTTTGCATGCTACTCACCTACTACATGTGAATCAA < 41bp 1 0.601276761122491 1 0.210974663496017 experiment 0.797446477755018 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125475549 chr11:125475564 stopgain 1.000 1 36 hm5C_associated_SNPs_40502 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:125475535-125475586
64251 chr11 65826383 65826383 1 + G A UCEC 65826372 + 65826352 65826392 41 CGAGGGGTGTCCTCTGAGAGCTCTGGGGACCGGGAGAAAGA CGAGGGGTGTCCTCTGAGAGCTCTGGGGACCAGGAGAAAGA < 41bp 1 0.498826931849463 1 0.292611747980118 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826372 chr11:65826383 nonsynonymous SNV 0.993 0 32 hm5C_associated_SNPs_40503 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chr11 65826383 65826383 1 + G A UCEC 65826381 + 65826361 65826401 41 TCCTCTGAGAGCTCTGGGGACCGGGAGAAAGACTCAACCCG TCCTCTGAGAGCTCTGGGGACCAGGAGAAAGACTCAACCCG < 41bp 1 0.44740257677714 1 0.408260345458984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826381 chr11:65826383 nonsynonymous SNV 0.993 0 23 hm5C_associated_SNPs_40504 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826328-65826388
64251 chrX 131202536 131202536 1 + T G UCEC 131202534 + 131202514 131202554 41 ACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTG ACACAGATTAAAAGAAATACCTGTGTGGGAACTCCATTTTG < 41bp 1 0.695114965206778 1 0.0476967096328735 experiment 0.609770069586444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STK26 ENSG00000134602 CDS Human protein_coding chrX:131202534 chrX:131202536 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_40505 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:131202519-131202555
64251 chr10 89474575 89474575 1 + A G UCEC 89474562 + 89474542 89474582 41 TCCTGAGCGTGTGCTTAAAACCAATTTGTCCACAGTGAGTG TCCTGAGCGTGTGCTTAAAACCAATTTGTCCACGGTGAGTG < 41bp 1 0.27819363088571 1 0.0625183284282684 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89474562 chr10:89474575 synonymous SNV . 0 34 hm5C_associated_SNPs_40506 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:89474554-89474580
64251 chr1 163306613 163306613 1 + C T UCEC 163306605 + 163306585 163306625 41 ATTCACTTCAGAGAAGCATGCCGTGAAACGTATATGGAATT ATTCACTTCAGAGAAGCATGCCGTGAAATGTATATGGAATT < 41bp 1 0.147031419747301 1 0.251870214939117 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NUF2 ENSG00000143228 CDS Human protein_coding chr1:163306605 chr1:163306613 nonsynonymous SNV 0.949 2 29 hm5C_associated_SNPs_40508 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:163306591-163306614
64251 chr17 1648483 1648483 1 + C T UCEC 1648475 + 1648455 1648495 41 CCCTTTCTCCACAGTTCTCCCCTGTGAGCGCCATGGAGCCC CCCTTTCTCCACAGTTCTCCCCTGTGAGTGCCATGGAGCCC < 41bp 1 0.131333673839482 1 0.0387519299983978 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1648475 chr17:1648483 synonymous SNV . 0 29 hm5C_associated_SNPs_40509 0 0 4 DDX3X POSTAR2 ENCODE chr17:1648474-1648508
64251 chr8 143816758 143816758 1 + G A UCEC 143816777 + 143816757 143816797 41 AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACGAG AACTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACGAG < 41bp 1 0.235357841596828 1 0.152596145868301 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THEM6 ENSG00000130193 CDS Human protein_coding chr8:143816777 chr8:143816758 nonsynonymous SNV . 0 2 hm5C_associated_SNPs_40510 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:143816758-143816759
64251 chr5 176468188 176468188 1 + C A UCEC 176468185 + 176468165 176468205 41 AACACCCAGTGTAAGGTTTGCTGCGCCTTGCTTATTTCTGA AACACCCAGTGTAAGGTTTGCTGAGCCTTGCTTATTTCTGA < 41bp 1 0.419575102276875 1 0.10033392906189 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176468185 chr5:176468188 stopgain 0.966 1 24 hm5C_associated_SNPs_40511 0 0 2 PPIG POSTAR2 ENCODE chr5:176468127-176468225
64251 chrX 47030522 47030522 1 + C T UCEC 47030525 + 47030505 47030545 41 CCAGGCTTCCCCCGAGACGGCGACTATCGGGACCAGGACTA CCAGGCTTCCCCCGAGATGGCGACTATCGGGACCAGGACTA < 41bp 1 0.6214891055193 1 0.283570945262909 experiment 0.757021788961399 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM10 ENSG00000182872 CDS Human protein_coding chrX:47030525 chrX:47030522 synonymous SNV . 0 18 hm5C_associated_SNPs_40513 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:47030518-47030544
64251 chr11 86518803 86518803 1 + G A UCEC 86518805 + 86518785 86518825 41 GCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAA GCATACCGCCTCCCTGTCATCTTGCCCCAGTCTACCCTCAA < 41bp 1 0.314107596696753 1 0.322710365056992 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518805 chr11:86518803 nonsynonymous SNV 0.987 0 19 hm5C_associated_SNPs_40515 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:86518761-86518807
64251 chr2 74757424 74757424 1 + G A UCEC 74757418 + 74757398 74757438 41 GATACCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCCG GATACCAGGACCCGGGAGGCCTCAGAAAACTCTGGAACCCG < 41bp 1 0.731285217337212 1 0.853102147579193 experiment 0.537429565325577 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757418 chr2:74757424 synonymous SNV . 0 27 hm5C_associated_SNPs_40516 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:74757423-74757424
64251 chrX 73046500 73046500 1 - G A UCEC 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAAGACTTGGGGAAATCCCAAGATGAGAACCCTAAAC < 41bp 1 0.601000578880284 1 0.49024111032486 experiment 0.797998842239431 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046500 . . 0 11 hm5C_associated_SNPs_40518 0 0 95 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr3 113784189 113784189 1 + G A UCEC 113784180 + 113784160 113784200 41 ACCTGGGCAAAACAGGGGACCACACCATGGATATTCCAGGC ACCTGGGCAAAACAGGGGACCACACCATGAATATTCCAGGC < 41bp 1 0.249832242448683 1 0.170358449220657 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113784180 chr3:113784189 nonsynonymous SNV 0.988 2 30 hm5C_associated_SNPs_40520 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:113784174-113784191
64251 chr7 151818000 151818000 1 + C T UCEC 151818003 + 151817983 151818023 41 CTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGG CTCGCTCATCAGACCCGTCACGGCTCATGAAATGCCACGGG < 41bp 1 0.537722418914095 1 0.406164079904556 experiment 0.92455516217181 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151818003 chr7:151818000 nonsynonymous SNV 0.974 4 18 hm5C_associated_SNPs_40521 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:151817975-151818001
64251 chr3 58109018 58109018 1 + G A UCEC 58109014 + 58108994 58109034 41 CCCACAAAACCCGGGGAGTACTTCGTCAACATCCTCTTTGA CCCACAAAACCCGGGGAGTACTTCATCAACATCCTCTTTGA < 41bp 1 0.322667724043876 1 0.348004639148712 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58109014 chr3:58109018 nonsynonymous SNV 0.929 4 25 hm5C_associated_SNPs_40522 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:58109018-58109019
64251 chr15 99673013 99673013 1 + G A UCEC 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGATGTGTCTGACCGTGGTTCCTGGAGAGACGC < 41bp 1 0.229597514100491 1 0.0487443804740906 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673013 nonsynonymous SNV 0.002 1 11 hm5C_associated_SNPs_40524 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99673013-99673032
64251 chr20 60882672 60882672 1 + C T UCEC 60882662 + 60882642 60882682 41 CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGCGGTCACCCCG CTCTTCGCAGCTCCCGGAGCCAGTCGGCAGTGGTCACCCCG < 41bp 1 0.278598634030778 1 0.566186249256134 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882662 chr20:60882672 nonsynonymous SNV 0.837 1 31 hm5C_associated_SNPs_40526 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:60882659-60882697
64251 chr1 166818716 166818716 1 + G T UCEC 166818712 + 166818692 166818732 41 CGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAA CGCCCAGGAAATGAACATTCCAGATAAAGGGTTCAAGGCAA < 41bp 1 0.399964220226135 1 0.296036660671234 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166818712 chr1:166818716 nonsynonymous SNV 0.980 0 25 hm5C_associated_SNPs_40527 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166818686-166818725
64251 chr1 155106005 155106005 1 + C T UCEC 155106004 + 155105984 155106024 41 CCCATCCACCAGCATGAAGACCGCTGCTTGAGGTTGAAGGT CCCATCCACCAGCATGAAGACTGCTGCTTGAGGTTGAAGGT < 41bp 1 0.393152699033394 1 0.240842342376709 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106004 chr1:155106005 nonsynonymous SNV 0.899 2 22 hm5C_associated_SNPs_40528 0 0 5 BUD13 POSTAR2 ENCODE chr1:155105924-155106018
64251 chr19 4323379 4323379 1 + A T UCEC 4323383 + 4323363 4323403 41 ATGCCCGCACCAAACAAGTGCTGCACACTTTCAAGACCAGG ATGCCCGCACCAAACATGTGCTGCACACTTTCAAGACCAGG < 41bp 1 0.370017120236558 1 0.125342160463333 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323383 chr19:4323379 nonsynonymous SNV 0.653 2 17 hm5C_associated_SNPs_40529 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4323342-4323387
64251 chr9 139752163 139752163 1 + G A UCEC 139752175 + 139752155 139752195 41 GGCCAGACGGCCTCCCTGACCTCCAAGGAGCACAGGCCCCT GGCCAGACAGCCTCCCTGACCTCCAAGGAGCACAGGCCCCT < 41bp 1 0.788749556254943 1 0.834015369415283 experiment 0.422500887490113 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139752175 chr9:139752163 synonymous SNV . 0 9 hm5C_associated_SNPs_40530 0 0 1 EFTUD2 POSTAR2 ENCODE chr9:139752127-139752167
64251 chr16 31470903 31470903 1 + G A UCEC 31470910 + 31470890 31470930 41 CCTCGCGCAGCTCGCGGCGGCGGCCGGGGAGGCTCTGGGTG CCTCGCGCAGCTCACGGCGGCGGCCGGGGAGGCTCTGGGTG < 41bp 1 0.396930014915487 1 0.581908822059631 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31470910 chr16:31470903 nonsynonymous SNV 0.992 0 14 hm5C_associated_SNPs_40531 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:31470903-31470904
64251 chr13 113729374 113729374 1 + C A UCEC 113729386 + 113729366 113729406 41 AACAAGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCCA AACAAGCAATACGCGGTAGACTCCATCCGCCCAAAGTGCCA < 41bp 1 0.682304289774442 1 0.90852278470993 experiment 0.635391420451115 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113729386 chr13:113729374 nonsynonymous SNV 0.805 4 9 hm5C_associated_SNPs_40534 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113729311-113729442
64251 chr17 46189986 46189986 1 + C A UCEC 46189985 + 46189965 46190005 41 CCGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT CCGAGTGCAGAATGAGGGCTCATGGAACTCTTATGTGGATT < 41bp 1 0.326981322980603 1 0.150201082229614 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX11 ENSG00000002919 CDS Human protein_coding chr17:46189985 chr17:46189986 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_40535 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:46189967-46189989
64251 chr16 722999 722999 1 + G A UCEC 723004 + 722984 723024 41 GCCCGAAGGTGTCGCGGTGTCTGGCCCATCACCGGCCGAGT GCCCGAAGGTGTCGCAGTGTCTGGCCCATCACCGGCCGAGT < 41bp 1 0.715877119235058 1 0.317327499389648 experiment 0.568245761529884 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723004 chr16:722999 synonymous SNV . 0 16 hm5C_associated_SNPs_40536 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:722972-723010
64251 chr1 44058258 44058258 1 + G A UCEC 44058240 + 44058220 44058260 41 TATGGGGGTGGGCGTCTTCACCCCCACCATTGAGGCCCGCA TATGGGGGTGGGCGTCTTCACCCCCACCATTGAGGCCCACA < 41bp 1 0.143604892434497 1 0.0921421349048615 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44058240 chr1:44058258 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_40537 0 0 2 PRPF8 POSTAR2 ENCODE chr1:44058242-44058347
64251 chr6 33243795 33243795 1 + C T UCEC 33243783 + 33243763 33243803 41 ATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTCTT ATGCAGAATCCACGCCAGTACAAGATCCCAGATTGGTTCTT < 41bp 1 0.795001039437471 1 0.159480303525925 experiment 0.409997921125058 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243783 chr6:33243795 synonymous SNV . 0 33 hm5C_associated_SNPs_40538 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:33243739-33243813
64251 chr14 24646064 24646064 1 + C T UCEC 24646055 + 24646035 24646075 41 GATTCCGGTCACTGTGCTGCCACCTGAGGCCATCACGATCC GATTCCGGTCACTGTGCTGCCACCTGAGGTCATCACGATCC < 41bp 1 0.571620290562792 1 0.115216910839081 experiment 0.856759418874417 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control REC8 ENSG00000100918 CDS Human protein_coding chr14:24646055 chr14:24646064 nonsynonymous SNV 0.189 0 30 hm5C_associated_SNPs_40539 0 0 3 GRWD1 POSTAR2 ENCODE chr14:24646052-24646108
64251 chr17 38610261 38610261 1 + T C UCEC 38610248 + 38610228 38610268 41 GCCGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT GCCGCTTCACAGAGCCGCACCCACGAGGACCTCCACATCAT < 41bp 1 0.332124496018242 1 0.111516296863556 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610248 chr17:38610261 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_40542 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38610244-38610282
64251 chr2 27459289 27459289 1 + T C UCEC 27459284 + 27459264 27459304 41 CAATGCGTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTC CAATGCGTGGAGCTGGGGGCCGGCGCCTCTCTTCCTTTGTC < 41bp 1 0.424512629469591 1 0.774011850357056 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27459284 chr2:27459289 synonymous SNV . 0 26 hm5C_associated_SNPs_40545 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27459280-27459301
64251 chr7 150034690 150034690 1 + T C UCEC 150034708 + 150034688 150034728 41 GGTACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT GGCACTCAGCTCTGCGGGCCCCACCTCTTCCTTCGTCTTCT < 41bp 1 0.199029488099299 1 0.0322515368461609 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034708 chr7:150034690 nonsynonymous SNV 0.093 0 3 hm5C_associated_SNPs_40546 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150034689-150034721
64251 chr5 137735600 137735600 1 + T C UCEC 137735614 + 137735594 137735634 41 GTGATGTGTGTGAAACAACTCTCTTCAACATCCACTGGGTT GTGATGCGTGTGAAACAACTCTCTTCAACATCCACTGGGTT < 41bp 1 0.138618304849949 1 0.0794868171215057 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137735614 chr5:137735600 nonsynonymous SNV 0.995 1 7 hm5C_associated_SNPs_40547 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137735562-137735605
64251 chr1 144014041 144014041 1 + C A UCEC 144014050 + 144014030 144014070 41 ACCTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGC ACCTGGAGAAGATGGCAGAACGCTTCCTGGCCAAGACATGC < 41bp 1 0.160981091075633 1 0.146836847066879 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014050 chr1:144014041 . 0.784 2 12 hm5C_associated_SNPs_40548 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:144014014-144014041
64251 chr1 144014041 144014041 1 + C A UCEC 144014052 + 144014032 144014072 41 CTGGAGAAGCTGGCAGAACGCTTCCTGGCCAAGACATGCAG CTGGAGAAGATGGCAGAACGCTTCCTGGCCAAGACATGCAG < 41bp 1 0.215410607446465 1 0.368061393499374 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014052 chr1:144014041 . 0.784 2 10 hm5C_associated_SNPs_40549 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:144014014-144014041
64251 chr17 40842211 40842211 1 + A G UCEC 40842212 + 40842192 40842232 41 CTGAAGCCATTTGTAGTGTACTGTGATATCCGAGGTAAGTG CTGAAGCCATTTGTAGTGTGCTGTGATATCCGAGGTAAGTG < 41bp 1 0.19460196315874 1 0.0823725461959839 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40842212 chr17:40842211 nonsynonymous SNV 0.999 3 20 hm5C_associated_SNPs_40552 0 0 1 DDX24 POSTAR2 ENCODE chr17:40842170-40842226
64251 chr16 67671681 67671681 1 + C T UCEC 67671677 + 67671657 67671697 41 AAAAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAG AAAAAGAGCCAGATGCTGAGCCCGTAGAGGGAGAGGAAGAG < 41bp 1 0.299900865032832 1 0.109221398830414 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671677 chr16:67671681 nonsynonymous SNV 0.099 0 25 hm5C_associated_SNPs_40553 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671681 67671681 1 + C T UCEC 67671678 + 67671658 67671698 41 AAAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGG AAAAGAGCCAGATGCTGAGCCCGTAGAGGGAGAGGAAGAGG < 41bp 1 0.364585139161399 1 0.295470535755157 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671678 chr16:67671681 nonsynonymous SNV 0.099 0 24 hm5C_associated_SNPs_40554 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671681 67671681 1 + C T UCEC 67671679 + 67671659 67671699 41 AAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGA AAAGAGCCAGATGCTGAGCCCGTAGAGGGAGAGGAAGAGGA < 41bp 1 0.22657942647362 1 0.344040960073471 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671679 chr16:67671681 nonsynonymous SNV 0.099 0 23 hm5C_associated_SNPs_40555 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chrX 69353952 69353952 1 + C T UCEC 69353956 + 69353936 69353976 41 GACCTCCTTGAGAAGGCTGCCGAAATGTTATCGCAGCTCGA GACCTCCTTGAGAAGGTTGCCGAAATGTTATCGCAGCTCGA < 41bp 1 0.573878048977264 1 0.745540738105774 experiment 0.852243902045472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353956 chrX:69353952 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_40556 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69353919-69353956
64251 chrX 69353952 69353952 1 + C T UCEC 69353969 + 69353949 69353989 41 AGGCTGCCGAAATGTTATCGCAGCTCGACTTGTTCAGGTAT AGGTTGCCGAAATGTTATCGCAGCTCGACTTGTTCAGGTAT < 41bp 1 0.351502743504178 1 0.742224156856537 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69353969 chrX:69353952 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_40557 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69353919-69353956
64251 chr11 74329739 74329739 1 + C T UCEC 74329725 + 74329705 74329745 41 GACCACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTT GACCACCAATGGTCATGGCCCACCTGCATCCAAGTAGGTTT < 41bp 1 0.442579330493226 1 0.0242793262004852 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329725 chr11:74329739 stopgain 0.971 0 35 hm5C_associated_SNPs_40558 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329727 + 74329707 74329747 41 CCACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCC CCACCAATGGTCATGGCCCACCTGCATCCAAGTAGGTTTCC < 41bp 1 0.122083329019704 1 0.0572724938392639 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329727 chr11:74329739 stopgain 0.971 0 33 hm5C_associated_SNPs_40559 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329728 + 74329708 74329748 41 CACCAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCC CACCAATGGTCATGGCCCACCTGCATCCAAGTAGGTTTCCC < 41bp 1 0.781849317482801 1 0.46821191906929 experiment 0.436301365034397 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329728 chr11:74329739 stopgain 0.971 0 32 hm5C_associated_SNPs_40560 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329731 + 74329711 74329751 41 CAATGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGC CAATGGTCATGGCCCACCTGCATCCAAGTAGGTTTCCCAGC < 41bp 1 0.134658392164968 1 0.14274537563324 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329731 chr11:74329739 stopgain 0.971 0 29 hm5C_associated_SNPs_40561 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329734 + 74329714 74329754 41 TGGTCATGGCCCACCTGCATCCAAGCAGGTTTCCCAGCAGC TGGTCATGGCCCACCTGCATCCAAGTAGGTTTCCCAGCAGC < 41bp 1 0.343964088065069 1 0.488645881414413 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329734 chr11:74329739 stopgain 0.971 0 26 hm5C_associated_SNPs_40562 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329746 + 74329726 74329766 41 ACCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTA ACCTGCATCCAAGTAGGTTTCCCAGCAGCCCAAAGGAATTA < 41bp 1 0.472641952479715 1 0.126289278268814 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329746 chr11:74329739 stopgain 0.971 0 14 hm5C_associated_SNPs_40563 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329747 + 74329727 74329767 41 CCTGCATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTAT CCTGCATCCAAGTAGGTTTCCCAGCAGCCCAAAGGAATTAT < 41bp 1 0.230131971032955 1 0.11486878991127 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329747 chr11:74329739 stopgain 0.971 0 13 hm5C_associated_SNPs_40564 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329751 + 74329731 74329771 41 CATCCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTATGGGA CATCCAAGTAGGTTTCCCAGCAGCCCAAAGGAATTATGGGA < 41bp 1 0.339794353366197 1 0.446270376443863 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329751 chr11:74329739 stopgain 0.971 0 9 hm5C_associated_SNPs_40565 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr11 74329739 74329739 1 + C T UCEC 74329754 + 74329734 74329774 41 CCAAGCAGGTTTCCCAGCAGCCCAAAGGAATTATGGGAATG CCAAGTAGGTTTCCCAGCAGCCCAAAGGAATTATGGGAATG < 41bp 1 0.481866990148711 1 0.119034081697464 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLD3 ENSG00000077514 CDS Human protein_coding chr11:74329754 chr11:74329739 stopgain 0.971 0 6 hm5C_associated_SNPs_40566 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:74329711-74329749
64251 chr2 100011283 100011283 1 + A G UCEC 100011282 + 100011262 100011302 41 TTAGTGCAGAAATTATTTATCATTTATTTGATGCCTTTACA TTAGTGCAGAAATTATTTATCGTTTATTTGATGCCTTTACA < 41bp 1 0.1073945988817 1 0.0676544308662415 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100011282 chr2:100011283 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_40567 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:100011244-100011292
64251 chr11 988585 988585 1 + G A UCEC 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCATGGACCTCCTCTACGCCATGTGCGACCGC < 41bp 1 0.649928516862655 1 0.470606505870819 experiment 0.70014296627469 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988585 nonsynonymous SNV 0.998 3 12 hm5C_associated_SNPs_40568 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:988569-988597
64251 chr15 75644697 75644697 1 + C T UCEC 75644692 + 75644672 75644712 41 ATCCCCCCCTTTGAGAAGGCCCGCTCGGTCCTGGAGGCCCT ATCCCCCCCTTTGAGAAGGCCCGCTTGGTCCTGGAGGCCCT < 41bp 1 0.18797100098879 1 0.0640021860599518 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75644692 chr15:75644697 nonsynonymous SNV 0.085 0 26 hm5C_associated_SNPs_40570 0 0 2 PPIG POSTAR2 ENCODE chr15:75644667-75644706
64251 chr2 27280284 27280284 1 + A G UCEC 27280287 + 27280267 27280307 41 GGCTTTCCCCTCCAGATACACTGTGGAACTATTTGAGCAGG GGCTTTCCCCTCCAGATGCACTGTGGAACTATTTGAGCAGG < 41bp 1 0.458769878316777 1 0.286044180393219 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280287 chr2:27280284 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_40571 0 0 1 DDX55 POSTAR2 ENCODE chr2:27280188-27280307
64251 chr19 757070 757070 1 + G A UCEC 757057 + 757037 757077 41 TACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGG TACCATCTGGTGTGCATGGGCCCCGAGGCCAGCAGCTGGGG < 41bp 1 0.313718478371584 1 0.0672054886817932 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757057 chr19:757070 nonsynonymous SNV 0.032 1 34 hm5C_associated_SNPs_40572 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757070 757070 1 + G A UCEC 757058 + 757038 757078 41 ACCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGC ACCATCTGGTGTGCATGGGCCCCGAGGCCAGCAGCTGGGGC < 41bp 1 0.590320399484784 1 0.42055881023407 experiment 0.819359201030432 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757058 chr19:757070 nonsynonymous SNV 0.032 1 33 hm5C_associated_SNPs_40573 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757070 757070 1 + G A UCEC 757059 + 757039 757079 41 CCATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCC CCATCTGGTGTGCATGGGCCCCGAGGCCAGCAGCTGGGGCC < 41bp 1 0.406840159388942 1 0.200696349143982 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757059 chr19:757070 nonsynonymous SNV 0.032 1 32 hm5C_associated_SNPs_40574 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr19 757070 757070 1 + G A UCEC 757060 + 757040 757080 41 CATCTGGTGTGCATGGGCCCCGAGGCCAGCGGCTGGGGCCA CATCTGGTGTGCATGGGCCCCGAGGCCAGCAGCTGGGGCCA < 41bp 1 0.759781319034595 1 0.777939438819885 experiment 0.48043736193081 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MISP ENSG00000099812 CDS Human protein_coding chr19:757060 chr19:757070 nonsynonymous SNV 0.032 1 31 hm5C_associated_SNPs_40575 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:757029-757073
64251 chr4 1332372 1332372 1 + G A UCEC 1332384 + 1332364 1332404 41 CCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAA CCGCCCATAATGCTGCCCAACGGCTACGTCTACGGCTACAA < 41bp 1 0.551527424783228 1 0.355048000812531 experiment 0.896945150433545 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAEA ENSG00000090316 CDS Human protein_coding chr4:1332384 chr4:1332372 nonsynonymous SNV 0.999 4 9 hm5C_associated_SNPs_40577 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:1332338-1332374
64251 chr3 49713554 49713554 1 + C T UCEC 49713571 + 49713551 49713591 41 AAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTT AAGTGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTT < 41bp 1 0.201842229822531 1 0.0651889443397522 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49713571 chr3:49713554 nonsynonymous SNV 0.999 3 4 hm5C_associated_SNPs_40580 0 0 6 FXR2 POSTAR2 ENCODE chr3:49713520-49713590
64251 chr19 42729212 42729212 1 + C T UCEC 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA GAGTTCTTGGAGCATCAGGGCACCCATTTTGACTCCCTAGA < 41bp 1 0.151327718047285 1 0.038733959197998 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729212 synonymous SNV . 0 27 hm5C_associated_SNPs_40581 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:42729188-42729216
64251 chr10 3155616 3155616 1 + A G UCEC 3155619 + 3155599 3155639 41 ACCCGCGGCTGGGATGAACGCAGCCGTACGCTCAGCTGTGC ACCCGCGGCTGGGATGAGCGCAGCCGTACGCTCAGCTGTGC < 41bp 1 0.632247274150753 1 0.642803072929382 experiment 0.735505451698494 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3155619 chr10:3155616 nonsynonymous SNV 0.150 5 18 hm5C_associated_SNPs_40583 0 0 2 YBX3 POSTAR2 ENCODE chr10:3155614-3155624
64251 chr18 13096262 13096262 1 + G A UCEC 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTGGCCAGCACATTGCCTCACAGTCACGCCGCAGCATGGAT < 41bp 1 0.0900927207829036 1 0.0883151590824127 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096262 synonymous SNV . 0 10 hm5C_associated_SNPs_40584 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:13096223-13096262
64251 chr19 36104800 36104800 1 + C A UCEC 36104795 + 36104775 36104815 41 TCAAGAAGATCCGGGGAAACCTACTCTGGTAACTGCTTCTT TCAAGAAGATCCGGGGAAACCTACTATGGTAACTGCTTCTT < 41bp 1 0.579722130679038 1 0.131654798984528 experiment 0.840555738641924 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36104795 chr19:36104800 synonymous SNV . 0 26 hm5C_associated_SNPs_40585 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36104767-36104803
64251 chr1 192779343 192779343 1 + C A UCEC 192779358 + 192779338 192779378 41 TTCCTCTACTCCTGGGAAGCCCAAAACCGGCAAAAAAAGCA TTCCTATACTCCTGGGAAGCCCAAAACCGGCAAAAAAAGCA < 41bp 1 0.305023595152215 1 0.547304928302765 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RGS2 ENSG00000116741 CDS Human protein_coding chr1:192779358 chr1:192779343 nonsynonymous SNV 0.966 1 6 hm5C_associated_SNPs_40586 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:192779322-192779350
64251 chr19 11145704 11145704 1 + C T UCEC 11145691 + 11145671 11145711 41 TCGTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGAC TCGTGGATCATCAAGGACGACGCGGAGGTGGAGTGGCTGAC < 41bp 1 0.692637697819577 1 0.596965193748474 experiment 0.614724604360845 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145691 chr19:11145704 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_40595 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr19 11145704 11145704 1 + C T UCEC 11145707 + 11145687 11145727 41 ACGACGCGGAGGTGGAGCGGCTGACCTGTGAGGAGGAGGAG ACGACGCGGAGGTGGAGTGGCTGACCTGTGAGGAGGAGGAG < 41bp 1 0.306158243288212 1 0.258997559547424 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145707 chr19:11145704 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_40596 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145686-11145714
64251 chr15 93528733 93528733 1 + G T UCEC 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCATACAAATGACAGTGACTCTGACACTGAGTC < 41bp 1 0.190668131044737 1 0.0355815589427948 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528733 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_40597 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:93528712-93528733
64251 chr2 201436906 201436906 1 + A G UCEC 201436921 + 201436901 201436941 41 AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATAATTTCT AGCTTGGAAAGAAAGTAAACCGGAAGACAGAAATAATTTCT < 41bp 1 0.708458785124773 1 0.582142114639282 experiment 0.583082429750453 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436921 chr2:201436906 nonsynonymous SNV 0.752 1 6 hm5C_associated_SNPs_40598 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:201436885-201436907
64251 chr1 154988880 154988880 1 + C T UCEC 154988871 + 154988851 154988891 41 AGGCTTTCGCCAAGGAGGACCACCTGCAGCGCCACCTCAAA AGGCTTTCGCCAAGGAGGACCACCTGCAGTGCCACCTCAAA < 41bp 1 0.20372576580286 1 0.289002478122711 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988871 chr1:154988880 nonsynonymous SNV 0.998 2 30 hm5C_associated_SNPs_40601 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:154988854-154988891
64251 chr11 8706403 8706403 1 + G C UCEC 8706393 + 8706373 8706413 41 ACAGACACGGGTGAATGCTGCTAAAAACAAGACTGGGGCTG ACAGACACGGGTGAATGCTGCTAAAAACAACACTGGGGCTG < 41bp 1 0.676246968445928 1 0.732649803161621 experiment 0.647506063108145 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL27A ENSG00000166441 CDS Human protein_coding chr11:8706393 chr11:8706403 nonsynonymous SNV 0.974 0 31 hm5C_associated_SNPs_40604 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:8706392-8706439
64251 chr7 44802523 44802523 1 + G A UCEC 44802539 + 44802519 44802559 41 GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT GTCCACTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT < 41bp 1 0.0297539771981604 1 0.0305063128471375 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802539 chr7:44802523 nonsynonymous SNV 0.024 4 5 hm5C_associated_SNPs_40605 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44802519-44802543
64251 chrX 103434379 103434379 1 + G T UCEC 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTTGGCTCTTCCTTAACGAAGAGGTG < 41bp 1 0.357350215252482 1 0.153372079133987 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434379 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_40606 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:103434363-103434389
64251 chrX 48385609 48385609 1 + G A UCEC 48385618 + 48385598 48385638 41 CTCAGCCTGTGGGTGGTGATCGCCTTTCTCCGCCAGCATCC CTCAGCCTGTGAGTGGTGATCGCCTTTCTCCGCCAGCATCC < 41bp 1 0.766904458622166 1 0.157773166894913 experiment 0.466191082755669 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EBP ENSG00000147155 CDS Human protein_coding chrX:48385618 chrX:48385609 stopgain 1.000 0 12 hm5C_associated_SNPs_40607 0 0 10 RBM15 POSTAR2 ENCODE chrX:48385581-48385636
64251 chr2 39008756 39008756 1 + C A UCEC 39008755 + 39008735 39008775 41 GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCT GAAACTATGAATGAAGGGGACAATAGAGTGAGGGAGAAGCT < 41bp 1 0.464974961483498 1 0.315204560756683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008755 chr2:39008756 nonsynonymous SNV 0.747 0 22 hm5C_associated_SNPs_40609 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr2:39008706-39008757
64251 chr3 47324459 47324459 1 + G A UCEC 47324444 + 47324424 47324464 41 CGAGGCCTGCGCAGTTGCAGCGGCCGGGGAAGATGGTGGAG CGAGGCCTGCGCAGTTGCAGCGGCCGGGGAAGATGATGGAG < 41bp 1 0.572585558028925 1 0.527417242527008 experiment 0.854828883942149 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47324444 chr3:47324459 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_40610 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:47324459-47324460
64251 chr1 52870474 52870474 1 + A G UCEC 52870493 + 52870473 52870513 41 CAATATCTGGTGGAGAAGATCATTCGAACGCGAATCTATGA CGATATCTGGTGGAGAAGATCATTCGAACGCGAATCTATGA < 41bp 1 0.155347089917335 1 0.100541055202484 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52870493 chr1:52870474 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_40611 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:52870453-52870481
64251 chr16 30673995 30673995 1 + A G UCEC 30673982 + 30673962 30674002 41 CCAAGAACAGCCCCCGGGGCCCGACCCGCTGCTAGTGCCTT CCAAGAACAGCCCCCGGGGCCCGACCCGCTGCTGGTGCCTT < 41bp 1 0.159747413265492 1 0.166438639163971 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30673982 chr16:30673995 synonymous SNV . 0 34 hm5C_associated_SNPs_40613 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30673984-30674012
64251 chr16 30673995 30673995 1 + A G UCEC 30673983 + 30673963 30674003 41 CAAGAACAGCCCCCGGGGCCCGACCCGCTGCTAGTGCCTTT CAAGAACAGCCCCCGGGGCCCGACCCGCTGCTGGTGCCTTT < 41bp 1 0.366717199078797 1 0.13716995716095 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBRS ENSG00000156860 CDS Human protein_coding chr16:30673983 chr16:30673995 synonymous SNV . 0 33 hm5C_associated_SNPs_40614 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30673984-30674012
64251 chr2 89028816 89028816 1 + G A UCEC 89028799 + 89028779 89028819 41 TTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCCTGCAGTAT TTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCCTGCAATAT < 41bp 1 0.772567460892753 1 0.268481373786926 experiment 0.454865078214493 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPIA ENSG00000153574 CDS Human protein_coding chr2:89028799 chr2:89028816 synonymous SNV . 0 38 hm5C_associated_SNPs_40615 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:89028800-89028820
64251 chr21 47970639 47970639 1 + C T UCEC 47970626 + 47970606 47970646 41 TGCCCTCACACCTGTGTTACCAACCTCCCCAAACCTCGTCA TGCCCTCACACCTGTGTTACCAACCTCCCCAAATCTCGTCA < 41bp 1 0.236297120860366 1 0.166033834218979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47970626 chr21:47970639 nonsynonymous SNV 0.995 4 34 hm5C_associated_SNPs_40617 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr21:47970612-47970647
64251 chr6 147635028 147635028 1 + T C UCEC 147635039 + 147635019 147635059 41 GATATCCTATATTTGAAAATCCCTACCCTTTGAGTATACAT GATATCCTACATTTGAAAATCCCTACCCTTTGAGTATACAT < 41bp 1 0.0837669599104926 1 0.199543207883835 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147635039 chr6:147635028 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_40618 0 0 2 FXR1 POSTAR2 ENCODE chr6:147635024-147635168
64251 chr8 98699747 98699747 1 + C T UCEC 98699751 + 98699731 98699771 41 GGTTCATTGGATTCAACTATCCCTGGGATAGAAAATACCAT GGTTCATTGGATTCAATTATCCCTGGGATAGAAAATACCAT < 41bp 1 0.263745850409657 1 0.0685345530509949 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MTDH ENSG00000147649 CDS Human protein_coding chr8:98699751 chr8:98699747 nonsynonymous SNV 1.000 0 17 hm5C_associated_SNPs_40619 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr8:98699710-98699748
64251 chr12 132464254 132464254 1 + G T UCEC 132464239 + 132464219 132464259 41 TTTTTCATCTTTTTTCCCAGCAGCAAGCCCTCGCAGGGAGC TTTTTCATCTTTTTTCCCAGCAGCAAGCCCTCGCATGGAGC < 41bp 1 0.210951888076147 1 0.350771069526672 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132464239 chr12:132464254 nonsynonymous SNV 0.551 5 36 hm5C_associated_SNPs_40620 0 0 17 DDX24 POSTAR2 ENCODE chr12:132464241-132464286
64251 chr19 13054389 13054389 1 + C A UCEC 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACAAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA < 41bp 1 0.644578594905751 1 0.152832508087158 experiment 0.710842810188499 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054389 synonymous SNV . 0 6 hm5C_associated_SNPs_40621 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13054347-13054389
64251 chr19 13054389 13054389 1 + C A UCEC 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACAAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA < 41bp 1 0.706795027855633 1 0.307996571063995 experiment 0.586409944288734 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054389 synonymous SNV . 0 4 hm5C_associated_SNPs_40622 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13054347-13054389
64251 chr16 29708335 29708335 1 + C T UCEC 29708327 + 29708307 29708347 41 TGCCCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACT TGCCCAGCAGGCGGTGCGGGCGGCCAGATAGGCGGCTGACT < 41bp 1 0.407895189199425 1 0.443868815898895 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708327 chr16:29708335 stopgain 0.016 0 29 hm5C_associated_SNPs_40623 0 0 7 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr16 29708335 29708335 1 + C T UCEC 29708330 + 29708310 29708350 41 CCAGCAGGCGGTGCGGGCGGCCAGACAGGCGGCTGACTTCA CCAGCAGGCGGTGCGGGCGGCCAGATAGGCGGCTGACTTCA < 41bp 1 0.55591566632066 1 0.443738222122192 experiment 0.888168667358679 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPRT ENSG00000103485 CDS Human protein_coding chr16:29708330 chr16:29708335 stopgain 0.016 0 26 hm5C_associated_SNPs_40624 0 0 7 BUD13 POSTAR2 ENCODE chr16:29708308-29708362
64251 chr17 78081619 78081619 1 + G A UCEC 78081601 + 78081581 78081621 41 GTCTCCTGCATGTCCCAGCCCGGTGCGAACCTCTACGGGTC GTCTCCTGCATGTCCCAGCCCGGTGCGAACCTCTACGGATC < 41bp 1 0.468562941679044 1 0.626557469367981 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78081601 chr17:78081619 synonymous SNV . 0 39 hm5C_associated_SNPs_40627 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78081582-78081620
64251 chr17 7214417 7214417 1 + C T UCEC 7214415 + 7214395 7214435 41 CAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGAC CAACTCATAATATGGATGTCCCTAACATCAAAAGGAATGAC < 41bp 1 0.0850388707523243 1 0.0572859048843384 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214415 chr17:7214417 synonymous SNV . 0 23 hm5C_associated_SNPs_40628 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr17 7214417 7214417 1 + C T UCEC 7214416 + 7214396 7214436 41 AACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACT AACTCATAATATGGATGTCCCTAACATCAAAAGGAATGACT < 41bp 1 0.130518791436925 1 0.133776932954788 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214416 chr17:7214417 synonymous SNV . 0 22 hm5C_associated_SNPs_40629 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr2 182786960 182786960 1 + G A UCEC 182786940 + 182786920 182786960 41 GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTA < 41bp 1 0.503882711632874 1 0.260259628295898 experiment 0.992234576734252 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786940 chr2:182786960 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_40631 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:182786937-182786990
64251 chrX 73046731 73046731 1 - A G UCEC 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACCCGGGACAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.223249119227412 1 0.149332851171494 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046731 . . 0 11 hm5C_associated_SNPs_40632 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046731 73046731 1 - A G UCEC 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACCCGGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.556989649472224 1 0.392269670963287 experiment 0.886020701055552 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046731 . . 0 16 hm5C_associated_SNPs_40633 0 0 75 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chr17 29683571 29683571 1 + G A UCEC 29683551 + 29683531 29683571 41 CAAGAAATGGAATCAGGGATCACAACACCCCCCAAAATGAG CAAGAAATGGAATCAGGGATCACAACACCCCCCAAAATGAA < 41bp 1 0.262555249085134 1 0.412216782569885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29683551 chr17:29683571 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_40634 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:29683564-29683591
64251 chr11 764349 764349 1 + C T UCEC 764334 + 764314 764354 41 CACCTGGATGAGAAGTCTTTCCGTTGGTTGCACAACGAGGA CACCTGGATGAGAAGTCTTTCCGTTGGTTGCACAATGAGGA < 41bp 1 0.189284786854044 1 0.587426662445068 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764334 chr11:764349 nonsynonymous SNV 0.988 2 36 hm5C_associated_SNPs_40636 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:764301-764385
64251 chr1 112999417 112999417 1 + A G UCEC 112999436 + 112999416 112999456 41 TAAGCGTTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACC TGAGCGTTTATTGGGGTCATCAGCTAGCAGCCCTGGCTACC < 41bp 1 0.529833923514809 1 0.466560959815979 experiment 0.940332152970382 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999436 chr1:112999417 nonsynonymous SNV 0.173 3 2 hm5C_associated_SNPs_40637 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:112999361-112999418
64251 chr16 89971377 89971377 1 + C A UCEC 89971393 + 89971373 89971413 41 GAACCTGTACCTTGGGAGGTCACACTTTCTCTGGAAAGAGC GAACATGTACCTTGGGAGGTCACACTTTCTCTGGAAAGAGC < 41bp 1 0.26160074209636 1 0.132683128118515 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89971393 chr16:89971377 nonsynonymous SNV 0.949 3 5 hm5C_associated_SNPs_40640 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:89971360-89971380
64251 chr1 171544181 171544181 1 + C T UCEC 171544172 + 171544152 171544192 41 AACTGGAGTCAGCAGTAGTGCCAGTGGACCAAGCACTGCTA AACTGGAGTCAGCAGTAGTGCCAGTGGACTAAGCACTGCTA < 41bp 1 0.191821045207861 1 0.468962609767914 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171544172 chr1:171544181 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_40641 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:171544180-171544200
64251 chr1 12030856 12030856 1 + C T UCEC 12030850 + 12030830 12030870 41 TTGCGCCCATGACGGAGAAGCTCTACCCCGGCTACTACACC TTGCGCCCATGACGGAGAAGCTCTACTCCGGCTACTACACC < 41bp 1 0.476091325248907 1 0.313414990901947 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12030850 chr1:12030856 nonsynonymous SNV 0.982 3 27 hm5C_associated_SNPs_40644 0 0 1 RPS3 POSTAR2 ENCODE chr1:12030848-12030871
64251 chr2 38908569 38908569 1 + G A UCEC 38908580 + 38908560 38908600 41 AGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAA AGAGCACAAACCAGTCAGGCCACACCAGTCAACCTGACCAA < 41bp 1 0.212718885257965 1 0.144612103700638 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908580 chr2:38908569 nonsynonymous SNV 0.985 0 10 hm5C_associated_SNPs_40645 0 0 2 YBX3 POSTAR2 ENCODE chr2:38908560-38908584
64251 chrX 49127136 49127136 1 + T C UCEC 49127142 + 49127122 49127162 41 CGCTATGAGACCCCTGAGGGCACTTTCTGGGCCAACAACCA CGCTATGAGACCCCCGAGGGCACTTTCTGGGCCAACAACCA < 41bp 1 0.118295196544664 1 0.0630346238613129 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PPP1R3F ENSG00000049769 CDS Human protein_coding chrX:49127142 chrX:49127136 synonymous SNV . 0 15 hm5C_associated_SNPs_40646 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486178 chrX:49127136-49127137
64251 chr1 24996695 24996695 1 + G A UCEC 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAAC < 41bp 1 0.643206993679559 1 0.321196734905243 experiment 0.713586012640883 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996695 synonymous SNV . 0 40 hm5C_associated_SNPs_40647 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996681 + 24996661 24996701 41 CTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA CTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAACCCCCA < 41bp 1 0.231201750073726 1 0.576540470123291 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996681 chr1:24996695 synonymous SNV . 0 35 hm5C_associated_SNPs_40648 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996688 + 24996668 24996708 41 CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC CGGGTCTCCTGAGCCAGCAGCTAAAAAACCCCCAGCACCTC < 41bp 1 0.616754799045132 1 0.632949352264404 experiment 0.766490401909735 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996688 chr1:24996695 synonymous SNV . 0 28 hm5C_associated_SNPs_40649 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996696 + 24996676 24996716 41 CTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCC CTGAGCCAGCAGCTAAAAAACCCCCAGCACCTCCATCCCCC < 41bp 1 0.413512594400593 1 0.0884632170200348 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996696 chr1:24996695 synonymous SNV . 0 20 hm5C_associated_SNPs_40650 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996697 + 24996677 24996717 41 TGAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCG TGAGCCAGCAGCTAAAAAACCCCCAGCACCTCCATCCCCCG < 41bp 1 0.71964093263908 1 0.158609747886658 experiment 0.560718134721839 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996697 chr1:24996695 synonymous SNV . 0 19 hm5C_associated_SNPs_40651 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996698 + 24996678 24996718 41 GAGCCAGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGT GAGCCAGCAGCTAAAAAACCCCCAGCACCTCCATCCCCCGT < 41bp 1 0.287793047740456 1 0.0813460648059845 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996698 chr1:24996695 synonymous SNV . 0 18 hm5C_associated_SNPs_40652 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996703 + 24996683 24996723 41 AGCAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGT AGCAGCTAAAAAACCCCCAGCACCTCCATCCCCCGTCCAGT < 41bp 1 0.190296188509312 1 0.0676509141921997 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996703 chr1:24996695 synonymous SNV . 0 13 hm5C_associated_SNPs_40653 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996705 + 24996685 24996725 41 CAGCTAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCT CAGCTAAAAAACCCCCAGCACCTCCATCCCCCGTCCAGTCT < 41bp 1 0.0446162090390725 1 0.0241390764713287 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996705 chr1:24996695 synonymous SNV . 0 11 hm5C_associated_SNPs_40654 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr1 24996695 24996695 1 + G A UCEC 24996709 + 24996689 24996729 41 TAAAAAGCCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT TAAAAAACCCCCAGCACCTCCATCCCCCGTCCAGTCTCAGT < 41bp 1 0.0616619909014358 1 0.0763353705406189 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996709 chr1:24996695 synonymous SNV . 0 7 hm5C_associated_SNPs_40655 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:24996640-24996695
64251 chr5 139928645 139928645 1 + A C UCEC 139928628 + 139928608 139928648 41 CTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACAGAG CTCTCTCCAAGCTGGAGGAGCTGAAGGAGCAGGAGACCGAG < 41bp 1 0.624553365574824 1 0.358637124300003 experiment 0.750893268850352 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANKHD1-EIF4EBP3;EIF4EBP3 ENSG00000131503;ENSG00000243056;ENSG00000254996 CDS Human other chr5:139928628 chr5:139928645 synonymous SNV . 0 38 hm5C_associated_SNPs_40658 0 0 2 PRPF8 POSTAR2 ENCODE chr5:139928622-139928688
64251 chr3 15253710 15253710 1 + C T UCEC 15253701 + 15253681 15253721 41 CTGAGTATCTGGAAAGAGTTCAAGCTCTACATTCAGCAGGT CTGAGTATCTGGAAAGAGTTCAAGCTCTATATTCAGCAGGT < 41bp 1 0.453308933867379 1 0.219733983278275 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CAPN7 ENSG00000131375 CDS Human protein_coding chr3:15253701 chr3:15253710 nonsynonymous SNV 0.193 0 30 hm5C_associated_SNPs_40659 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:15253683-15253716
64251 chr2 32289200 32289200 1 + C T UCEC 32289205 + 32289185 32289225 41 CGCGCCAGCACCTGCCTCGGCCTCGGCCCCGGCGCCGGTGC CGCGCCAGCACCTGCTTCGGCCTCGGCCCCGGCGCCGGTGC < 41bp 1 0.448986183433485 1 0.152781546115875 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32289205 chr2:32289200 synonymous SNV . 0 16 hm5C_associated_SNPs_40661 0 0 1 DDX3X POSTAR2 ENCODE chr2:32289137-32289237
64251 chr2 32289200 32289200 1 + C T UCEC 32289208 + 32289188 32289228 41 GCCAGCACCTGCCTCGGCCTCGGCCCCGGCGCCGGTGCCGG GCCAGCACCTGCTTCGGCCTCGGCCCCGGCGCCGGTGCCGG < 41bp 1 0.783971964763603 1 0.640615820884705 experiment 0.432056070472794 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32289208 chr2:32289200 synonymous SNV . 0 13 hm5C_associated_SNPs_40662 0 0 1 DDX3X POSTAR2 ENCODE chr2:32289137-32289237
64251 chr2 32289200 32289200 1 + C T UCEC 32289211 + 32289191 32289231 41 AGCACCTGCCTCGGCCTCGGCCCCGGCGCCGGTGCCGGGCG AGCACCTGCTTCGGCCTCGGCCCCGGCGCCGGTGCCGGGCG < 41bp 1 0.688640448707917 1 0.556732416152954 experiment 0.622719102584166 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32289211 chr2:32289200 synonymous SNV . 0 10 hm5C_associated_SNPs_40663 0 0 1 DDX3X POSTAR2 ENCODE chr2:32289137-32289237
64251 chr2 32289200 32289200 1 + C T UCEC 32289213 + 32289193 32289233 41 CACCTGCCTCGGCCTCGGCCCCGGCGCCGGTGCCGGGCGGC CACCTGCTTCGGCCTCGGCCCCGGCGCCGGTGCCGGGCGGC < 41bp 1 0.598041386372957 1 0.763978719711304 experiment 0.803917227254085 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPAST ENSG00000021574 CDS Human protein_coding chr2:32289213 chr2:32289200 synonymous SNV . 0 8 hm5C_associated_SNPs_40664 0 0 1 DDX3X POSTAR2 ENCODE chr2:32289137-32289237
64251 chr17 76399727 76399727 1 + T C UCEC 76399746 + 76399726 76399766 41 ATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGAC ACGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGAC < 41bp 1 0.366904774928759 1 0.111531227827072 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PGS1 ENSG00000087157 CDS Human protein_coding chr17:76399746 chr17:76399727 nonsynonymous SNV 0.808 0 2 hm5C_associated_SNPs_40665 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:76399702-76399735
64251 chr11 837585 837585 1 + G A UCEC 837583 + 837563 837603 41 CGGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTCCAAC CGGTGGTGGCTCTTTGTGGGCAACGAGACCATGCCTCCAAC < 41bp 1 0.661177069972808 1 0.172374874353409 experiment 0.677645860054383 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 CDS Human protein_coding chr11:837583 chr11:837585 synonymous SNV . 0 23 hm5C_associated_SNPs_40669 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr11:837571-837592
64251 chr1 233514926 233514926 1 + G A UCEC 233514944 + 233514924 233514964 41 TGGGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG TGAGTGCACCGTCCTTCTGGCATCGGTGGCTCTGGGACTGG < 41bp 1 0.282834905898441 1 0.0512655377388 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514944 chr1:233514926 nonsynonymous SNV 0.002 0 3 hm5C_associated_SNPs_40670 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr8 48874120 48874120 1 + G T UCEC 48874104 + 48874084 48874124 41 GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGAGGCGA GAGGATGCCAGGTCATCTCCCTCTCAGAGACGTAGATGCGA < 41bp 1 0.139882038998523 1 0.0629492104053497 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874104 chr8:48874120 nonsynonymous SNV 0.516 0 37 hm5C_associated_SNPs_40671 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:48874080-48874140
64251 chr11 62655923 62655923 1 + T G UCEC 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CGTTCTCCGCTGGGCCTGGACTCGTCTCCTATATCCGCCAC < 41bp 1 0.787406733987009 1 0.479368537664413 experiment 0.425186532025982 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655923 nonsynonymous SNV 0.627 4 24 hm5C_associated_SNPs_40673 0 0 55 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62655908-62655935
64251 chr7 135272429 135272429 1 + T C UCEC 135272419 + 135272399 135272439 41 CCATTTCACTTAGAAGGGACCTGGAACACTTAATGCTTTTG CCATTTCACTTAGAAGGGACCTGGAACACTCAATGCTTTTG < 41bp 1 0.597961016559084 1 0.444275587797165 experiment 0.804077966881832 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135272419 chr7:135272429 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_40674 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:135272402-135272437
64251 chr1 198233303 198233303 1 + G T UCEC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTCATTGAATATAATGAACTAAA < 41bp 1 0.111406756223215 1 0.255815267562866 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233303 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_40675 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:198233273-198233303
64251 chr11 61897307 61897307 1 + G T UCEC 61897299 + 61897279 61897319 41 AGCCAGCTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGT AGCCAGCTGAGCTCCCGACGCCTCCGCATCAAGGACAGTGT < 41bp 1 0.0417581287753186 1 0.107030242681503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897299 chr11:61897307 nonsynonymous SNV 0.919 3 29 hm5C_associated_SNPs_40676 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr11 64701242 64701242 1 + G T UCEC 64701255 + 64701235 64701275 41 GCTACAGGGGACCCAGGGGGCCAAGGAGGCCCCCCTCCAGC GCTACAGTGGACCCAGGGGGCCAAGGAGGCCCCCCTCCAGC < 41bp 1 0.585047142722821 1 0.553826093673706 experiment 0.829905714554358 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP2R5B ENSG00000068971 CDS Human protein_coding chr11:64701255 chr11:64701242 nonsynonymous SNV 0.998 3 8 hm5C_associated_SNPs_40677 0 0 1 ZNF622 POSTAR2 ENCODE chr11:64701203-64701258
64251 chr22 50877169 50877169 1 + C T UCEC 50877165 + 50877145 50877185 41 GGCCCCCGGGAAGAAGGAAGCGCCCCCTGTGGAGGGTGACT GGCCCCCGGGAAGAAGGAAGCGCCTCCTGTGGAGGGTGACT < 41bp 1 0.384953250262429 1 0.216906756162643 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50877165 chr22:50877169 synonymous SNV . 0 25 hm5C_associated_SNPs_40678 0 0 3 DDX24 POSTAR2 ENCODE chr22:50877165-50877177
64251 chr20 39978515 39978515 1 + C T UCEC 39978516 + 39978496 39978536 41 GAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGT GAGTCCCACATGCAGTGGGTCTGGGGGAGGCTGCCTAAGGT < 41bp 1 0.714141159085301 1 0.826404809951782 experiment 0.571717681829399 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39978516 chr20:39978515 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_40679 0 0 3 DDX24 POSTAR2 ENCODE chr20:39978456-39978533
64251 chr14 39650851 39650851 1 + C T UCEC 39650831 + 39650811 39650851 41 GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAC GTCGGAGTAGGGGCCGGGGACATAATAGAGATAGAAAGCAT < 41bp 1 0.693891466301421 1 0.274739921092987 experiment 0.612217067397158 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650831 chr14:39650851 synonymous SNV . 0 41 hm5C_associated_SNPs_40680 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr14 39650851 39650851 1 + C T UCEC 39650849 + 39650829 39650869 41 GACATAATAGAGATAGAAAGCACAGAAGGAGCGTGGATCGG GACATAATAGAGATAGAAAGCATAGAAGGAGCGTGGATCGG < 41bp 1 0.453687278661958 1 0.318601578474045 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39650849 chr14:39650851 synonymous SNV . 0 23 hm5C_associated_SNPs_40681 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr4 184205517 184205517 1 + G T UCEC 184205512 + 184205492 184205532 41 AGTGCGCTCACAGACCTTTTCTCCAGGAGAGCGGAACCAGT AGTGCGCTCACAGACCTTTTCTCCATGAGAGCGGAACCAGT < 41bp 1 0.784607175338811 1 0.984071254730225 experiment 0.430785649322379 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184205512 chr4:184205517 stopgain 0.186 1 26 hm5C_associated_SNPs_40682 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:184205494-184205525
64251 chr16 89759812 89759812 1 + T C UCEC 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTCCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA < 41bp 1 0.645244073056396 1 0.823930263519287 experiment 0.709511853887207 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759812 nonsynonymous SNV 0.948 4 10 hm5C_associated_SNPs_40683 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr11 9456544 9456544 1 + A G UCEC 9456531 + 9456511 9456551 41 CAGTTGATACAGACACACTTCTGTCTGACACCAAGTATCTT CAGTTGATACAGACACACTTCTGTCTGACACCAGGTATCTT < 41bp 1 0.169755625561256 1 0.104059129953384 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9456531 chr11:9456544 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_40684 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:9456502-9456562
64251 chr10 102798421 102798421 1 + C T UCEC 102798423 + 102798403 102798443 41 CGCCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG CGCCCCTGGCTGGGGGCATCCCTGCAGGTGGGACTGGTGGG < 41bp 1 0.194301575937807 1 0.188364923000336 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN3 ENSG00000107819 CDS Human protein_coding chr10:102798423 chr10:102798421 nonsynonymous SNV 0.671 3 19 hm5C_associated_SNPs_40685 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:102798406-102798438
64251 chr19 12036064 12036064 1 + C T UCEC 12036063 + 12036043 12036083 41 CAGGAGCTGTAGAGAGGACCCCGGTACATCTGAAAGCCGGG CAGGAGCTGTAGAGAGGACCCTGGTACATCTGAAAGCCGGG < 41bp 1 0.679086469128031 1 0.449285745620728 experiment 0.641827061743939 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF700 ENSG00000196757;ENSG00000197054;ENSG00000267179 CDS Human other chr19:12036063 chr19:12036064 synonymous SNV . 0 22 hm5C_associated_SNPs_40686 0 0 3 BUD13 POSTAR2 ENCODE chr19:12036063-12036179
64251 chr19 41306558 41306558 1 + T C UCEC 41306542 + 41306522 41306562 41 TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGGAGCCTGAGC TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGGAGCCCGAGC < 41bp 1 0.658146968917047 1 0.956565976142883 experiment 0.683706062165905 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306542 chr19:41306558 synonymous SNV . 0 37 hm5C_associated_SNPs_40687 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41306540-41306569
64251 chr1 114500824 114500824 1 + G A UCEC 114500816 + 114500796 114500836 41 GCACCAGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA GCACCAGTTCCTGGAGTTGCCCAGCAGGATGTTTCCTTGCA < 41bp 1 0.312863798918533 1 0.388331174850464 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114500816 chr1:114500824 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_40688 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr1:114500824-114500825
64251 chr1 156705660 156705660 1 + C T UCEC 156705645 + 156705625 156705665 41 CAGCCTGGCTCTACTGCTTGCCCCACTGGTGGAGACGCTTA CAGCCTGGCTCTACTGCTTGCCCCACTGGTGGAGATGCTTA < 41bp 1 0.412165099843537 1 0.173626720905304 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156705645 chr1:156705660 nonsynonymous SNV 0.987 2 36 hm5C_associated_SNPs_40689 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:156705635-156705662
64251 chr1 180049715 180049715 1 + G A UCEC 180049727 + 180049707 180049747 41 ATAGGACTGGAGGACAATGTCACCTGCCTATCAAGTCCCAT ATAGGACTAGAGGACAATGTCACCTGCCTATCAAGTCCCAT < 41bp 1 0.3481363351472 1 0.26077863574028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180049727 chr1:180049715 nonsynonymous SNV 0.962 2 9 hm5C_associated_SNPs_40690 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:180049698-180049733
64251 chr3 33883505 33883505 1 + T C UCEC 33883497 + 33883477 33883517 41 GTGATTGAACAGGGAGGCATCCAGACTGTTGATCAGTTGAT GTGATTGAACAGGGAGGCATCCAGACTGCTGATCAGTTGAT < 41bp 1 0.562830879203392 1 0.200825572013855 experiment 0.874338241593215 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33883497 chr3:33883505 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_40691 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:33883498-33883539
64251 chr21 47978256 47978256 1 + G A UCEC 47978252 + 47978232 47978272 41 AAGGACCTGGGCCTGCCGGCCCGCGCCGTAAGCACCACGTT AAGGACCTGGGCCTGCCGGCCCGCACCGTAAGCACCACGTT < 41bp 1 0.415487237427875 1 0.310711354017258 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47978252 chr21:47978256 nonsynonymous SNV 0.143 4 25 hm5C_associated_SNPs_40693 0 0 4 BUD13 POSTAR2 ENCODE chr21:47978158-47978301
64251 chr5 141364477 141364477 1 + C A UCEC 141364483 + 141364463 141364503 41 ACATTTCAATGACCCTGGTTCACCATGTTTTAACCGGTATG ACATTTCAATGACCATGGTTCACCATGTTTTAACCGGTATG < 41bp 1 0.656054450288393 1 0.212841331958771 experiment 0.687891099423215 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141364483 chr5:141364477 nonsynonymous SNV 0.216 4 15 hm5C_associated_SNPs_40695 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:141364445-141364483
64251 chr19 4422641 4422641 1 + C T UCEC 4422658 + 4422638 4422678 41 AAGCGGGCCAAGGAGGAGGCCAAGAAGAAGAAGGAGGAAGA AAGTGGGCCAAGGAGGAGGCCAAGAAGAAGAAGGAGGAAGA < 41bp 1 0.574705984775676 1 0.672837257385254 experiment 0.850588030448648 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4422658 chr19:4422641 nonsynonymous SNV 0.728 2 4 hm5C_associated_SNPs_40696 0 0 13 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4422640-4422660
64251 chr10 129141943 129141943 1 + T G UCEC 129141924 + 129141904 129141944 41 TTTCAGCTGTGGAACAACTACTTTCACCTGGCTGTTGCTTT TTTCAGCTGTGGAACAACTACTTTCACCTGGCTGTTGCTGT < 41bp 1 0.0224334073564358 1 0.0520175993442535 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141924 chr10:129141943 nonsynonymous SNV 0.979 4 40 hm5C_associated_SNPs_40697 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141930 + 129141910 129141950 41 CTGTGGAACAACTACTTTCACCTGGCTGTTGCTTTCCTTAC CTGTGGAACAACTACTTTCACCTGGCTGTTGCTGTCCTTAC < 41bp 1 0.157586592870957 1 0.426722466945648 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141930 chr10:129141943 nonsynonymous SNV 0.979 4 34 hm5C_associated_SNPs_40698 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141931 + 129141911 129141951 41 TGTGGAACAACTACTTTCACCTGGCTGTTGCTTTCCTTACT TGTGGAACAACTACTTTCACCTGGCTGTTGCTGTCCTTACT < 41bp 1 0.22437253616669 1 0.237238973379135 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141931 chr10:129141943 nonsynonymous SNV 0.979 4 33 hm5C_associated_SNPs_40699 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141935 + 129141915 129141955 41 GAACAACTACTTTCACCTGGCTGTTGCTTTCCTTACTCAAG GAACAACTACTTTCACCTGGCTGTTGCTGTCCTTACTCAAG < 41bp 1 0.0492466726415323 1 0.0657682716846466 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141935 chr10:129141943 nonsynonymous SNV 0.979 4 29 hm5C_associated_SNPs_40700 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141941 + 129141921 129141961 41 CTACTTTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCC CTACTTTCACCTGGCTGTTGCTGTCCTTACTCAAGAGTCCC < 41bp 1 0.0367625615998966 1 0.121206223964691 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141941 chr10:129141943 nonsynonymous SNV 0.979 4 23 hm5C_associated_SNPs_40701 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141945 + 129141925 129141965 41 TTTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCA TTTCACCTGGCTGTTGCTGTCCTTACTCAAGAGTCCCTGCA < 41bp 1 0.0746626379076363 1 0.0268371999263763 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141945 chr10:129141943 nonsynonymous SNV 0.979 4 19 hm5C_associated_SNPs_40702 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141946 + 129141926 129141966 41 TTCACCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAA TTCACCTGGCTGTTGCTGTCCTTACTCAAGAGTCCCTGCAA < 41bp 1 0.0491633148200354 1 0.0325277745723724 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141946 chr10:129141943 nonsynonymous SNV 0.979 4 18 hm5C_associated_SNPs_40703 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141950 + 129141930 129141970 41 CCTGGCTGTTGCTTTCCTTACTCAAGAGTCCCTGCAACTGG CCTGGCTGTTGCTGTCCTTACTCAAGAGTCCCTGCAACTGG < 41bp 1 0.568311152106419 1 0.921694934368134 experiment 0.863377695787162 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141950 chr10:129141943 nonsynonymous SNV 0.979 4 14 hm5C_associated_SNPs_40704 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141960 + 129141940 129141980 41 GCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTC GCTGTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTC < 41bp 1 0.0108055813366443 1 0.0454113781452179 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141960 chr10:129141943 nonsynonymous SNV 0.979 4 4 hm5C_associated_SNPs_40705 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr10 129141943 129141943 1 + T G UCEC 129141961 + 129141941 129141981 41 CTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCA CTGTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCA < 41bp 1 0.198081230004467 1 0.264208763837814 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141961 chr10:129141943 nonsynonymous SNV 0.979 4 3 hm5C_associated_SNPs_40706 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:129141922-129141947
64251 chr1 28897780 28897780 1 + G A UCEC 28897788 + 28897768 28897808 41 ATGCTCAGTGGGGCTATGACCAGAACACAGGCAGCTACAGC ATGCTCAGTGGGACTATGACCAGAACACAGGCAGCTACAGC < 41bp 1 0.783837509119289 1 0.282699435949326 experiment 0.432324981761422 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28897788 chr1:28897780 nonsynonymous SNV 0.996 1 13 hm5C_associated_SNPs_40707 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:28897742-28897783
64251 chr8 48877255 48877255 1 + G A UCEC 48877243 + 48877223 48877263 41 ACCATTCAACGCATTGAAGACTAAGAATATGAGAAACCTGA ACCATTCAACGCATTGAAGACTAAGAATATGAAAAACCTGA < 41bp 1 0.169595971283763 1 0.234787732362747 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48877243 chr8:48877255 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_40708 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48877178-48877270
64251 chr1 120269483 120269483 1 + C T UCEC 120269481 + 120269461 120269501 41 TCTATCCTTGCAGGCAGATTCCCCAGGCGACGGCTTCGATG TCTATCCTTGCAGGCAGATTCCTCAGGCGACGGCTTCGATG < 41bp 1 0.536316732461747 1 0.0980839729309082 experiment 0.927366535076505 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120269481 chr1:120269483 synonymous SNV . 0 23 hm5C_associated_SNPs_40709 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:120269480-120269500
64251 chr10 103908233 103908233 1 + G A UCEC 103908226 + 103908206 103908246 41 CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCCCCA CATCCTCATCATCCAGTTCTCGAAGCCACTCACGATCCCCA < 41bp 1 0.452138674607577 1 0.740006446838379 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908226 chr10:103908233 nonsynonymous SNV 0.710 4 28 hm5C_associated_SNPs_40710 0 0 2 PCBP2 POSTAR2 ENCODE chr10:103908199-103908243
64251 chr15 93482841 93482841 1 + G A UCEC 93482839 + 93482819 93482859 41 AACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAG AACCTCGTGTTAAAAAGCAGCCAAAGACTCAGCGTGGAAAG < 41bp 1 0.136288891984055 1 0.0389395654201508 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482839 chr15:93482841 synonymous SNV . 0 23 hm5C_associated_SNPs_40712 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482841 93482841 1 + G A UCEC 93482840 + 93482820 93482860 41 ACCTCGTGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGA ACCTCGTGTTAAAAAGCAGCCAAAGACTCAGCGTGGAAAGA < 41bp 1 0.129368424290833 1 0.301869332790375 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482840 chr15:93482841 synonymous SNV . 0 22 hm5C_associated_SNPs_40713 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482841 93482841 1 + G A UCEC 93482846 + 93482826 93482866 41 TGTTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAA TGTTAAAAAGCAGCCAAAGACTCAGCGTGGAAAGAGAAAAA < 41bp 1 0.324454446465253 1 0.574907660484314 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482846 chr15:93482841 synonymous SNV . 0 16 hm5C_associated_SNPs_40714 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr15 93482841 93482841 1 + G A UCEC 93482848 + 93482828 93482868 41 TTAAAAAGCAGCCGAAGACTCAGCGTGGAAAGAGAAAAAAG TTAAAAAGCAGCCAAAGACTCAGCGTGGAAAGAGAAAAAAG < 41bp 1 0.487060763884326 1 0.781708955764771 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93482848 chr15:93482841 synonymous SNV . 0 14 hm5C_associated_SNPs_40715 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:93482821-93482842
64251 chr1 41457481 41457481 1 + G T UCEC 41457471 + 41457451 41457491 41 CTCAAATCCACTTGACACATCAGTGAAGGAGAAAATATCAA CTCAAATCCACTTGACACATCAGTGAAGGATAAAATATCAA < 41bp 1 0.193597862350645 1 0.206164449453354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTPS1 ENSG00000171793 CDS Human protein_coding chr1:41457471 chr1:41457481 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_40716 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:41457481-41457503
64251 chr5 82406963 82406963 1 + T C UCEC 82406946 + 82406926 82406966 41 ATTGTTGTCAGGAGCAGGACCAGCTGATGTATACACGTTTA ATTGTTGTCAGGAGCAGGACCAGCTGATGTATACACGCTTA < 41bp 1 0.636868043279348 1 0.492426604032516 experiment 0.726263913441305 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XRCC4 ENSG00000152422 CDS Human protein_coding chr5:82406946 chr5:82406963 nonsynonymous SNV 0.555 3 38 hm5C_associated_SNPs_40721 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:82406963-82406999
64251 chr19 41078001 41078001 1 + G A UCEC 41077999 + 41077979 41078019 41 GGACTCCAAGGGCCCGGCATCCGGGAGCACACACGGTGGGG GGACTCCAAGGGCCCGGCATCCAGGAGCACACACGGTGGGG < 41bp 1 0.269808966841758 1 0.876202166080475 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41077999 chr19:41078001 nonsynonymous SNV 0.609 3 23 hm5C_associated_SNPs_40734 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41077980-41078005
64251 chr7 98564724 98564724 1 + C T UCEC 98564739 + 98564719 98564759 41 AAAAACGCTTTCCGGAAGACCTTGAATTAAATGCCCAGTTT AAAAATGCTTTCCGGAAGACCTTGAATTAAATGCCCAGTTT < 41bp 1 0.202837359972086 1 0.254385769367218 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98564739 chr7:98564724 nonsynonymous SNV 0.998 2 6 hm5C_associated_SNPs_40735 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98564686-98564775
64251 chr11 120317116 120317116 1 + G T UCEC 120317136 + 120317116 120317156 41 GAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCCACT TAGAAGACCTGAGCTCATTCCTGAGGATCTGCATCGCCACT < 41bp 1 0.357020333856865 1 0.477932542562485 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120317136 chr11:120317116 nonsynonymous SNV 0.983 4 1 hm5C_associated_SNPs_40736 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:120317116-120317155
64251 chr2 70122274 70122274 1 + G A UCEC 70122272 + 70122252 70122292 41 CGGGAGAGAGAACGCAGGCGCCGAGAAAGGTCCAGGTCTCG CGGGAGAGAGAACGCAGGCGCCAAGAAAGGTCCAGGTCTCG < 41bp 1 0.646158210479685 1 0.442948430776596 experiment 0.707683579040629 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122272 chr2:70122274 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_40738 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:70122223-70122274
64251 chr9 19300318 19300318 1 + G T UCEC 19300313 + 19300293 19300333 41 AGCTGTCTTGACTGGGGTAGCTGAAGCTGTTGTAGCTGTAA AGCTGTCTTGACTGGGGTAGCTGAATCTGTTGTAGCTGTAA < 41bp 1 0.5628629436997 1 0.581621944904327 experiment 0.874274112600599 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19300313 chr9:19300318 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_40739 0 0 2 PRPF8 POSTAR2 ENCODE chr9:19300277-19300351
64251 chr3 38524741 38524741 1 + A T UCEC 38524735 + 38524715 38524755 41 GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGG GGTGTCCCTGATTCGGAGGTCGGTCATCGGCACTACCTCGG < 41bp 1 0.268440090018905 1 0.339996635913849 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524735 chr3:38524741 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_40740 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:38524712-38524778
64251 chr17 48736637 48736637 1 + G T UCEC 48736623 + 48736603 48736643 41 CCATCTATGGCTACCGGCATCCCCTGGAGGAGAAGGACCTC CCATCTATGGCTACCGGCATCCCCTGGAGGAGAATGACCTC < 41bp 1 0.188847710588277 1 0.15810552239418 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48736623 chr17:48736637 stopgain 0.997 1 35 hm5C_associated_SNPs_40741 0 0 3 PPIG POSTAR2 ENCODE chr17:48736618-48736729
64251 chr17 48736637 48736637 1 + G T UCEC 48736625 + 48736605 48736645 41 ATCTATGGCTACCGGCATCCCCTGGAGGAGAAGGACCTCTG ATCTATGGCTACCGGCATCCCCTGGAGGAGAATGACCTCTG < 41bp 1 0.312603779989562 1 0.403401613235474 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48736625 chr17:48736637 stopgain 0.997 1 33 hm5C_associated_SNPs_40742 0 0 3 PPIG POSTAR2 ENCODE chr17:48736618-48736729
64251 chr6 53785434 53785434 1 + C T UCEC 53785428 + 53785408 53785448 41 TCTTTGTCACTGCAGAGAATCTGCCTCGCTGTGGTGCACTG TCTTTGTCACTGCAGAGAATCTGCCTTGCTGTGGTGCACTG < 41bp 1 0.549584743978591 1 0.382216602563858 experiment 0.900830512042819 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53785428 chr6:53785434 nonsynonymous SNV 0.846 2 27 hm5C_associated_SNPs_40743 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:53785424-53785444
64251 chr12 3389564 3389564 1 + A C UCEC 3389553 + 3389533 3389573 41 CCCTCCGCCTGGCAGGTGAACGAGAACGCCAAGAAGGACCT CCCTCCGCCTGGCAGGTGAACGAGAACGCCACGAAGGACCT < 41bp 1 0.744446041338917 1 0.733397722244263 experiment 0.511107917322166 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3389553 chr12:3389564 nonsynonymous SNV 0.996 2 32 hm5C_associated_SNPs_40746 0 0 3 BUD13 POSTAR2 ENCODE chr12:3389522-3389589
64251 chr12 56537074 56537074 1 + C T UCEC 56537084 + 56537064 56537104 41 TCTGTCAAGTCTAATTCCTCCTTCATGTCAAGAGAGCGTGA TCTGTCAAGTTTAATTCCTCCTTCATGTCAAGAGAGCGTGA < 41bp 1 0.279868676135472 1 0.430492341518402 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56537084 chr12:56537074 nonsynonymous SNV 0.979 4 11 hm5C_associated_SNPs_40747 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:56537060-56537098
64251 chr15 57526290 57526290 1 + A G UCEC 57526295 + 57526275 57526315 41 AGGTGATGCACTTGGAAAGGCTTTGGCATCTGTGAGTATTG AGGTGATGCACTTGGGAAGGCTTTGGCATCTGTGAGTATTG < 41bp 1 0.139338703585222 1 0.0476078689098358 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57526295 chr15:57526290 synonymous SNV . 0 16 hm5C_associated_SNPs_40748 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:57526268-57526304
64251 chr11 9530372 9530372 1 + G T UCEC 9530377 + 9530357 9530397 41 GAGGAGGAGCAGGAAGCCTTCTTTGAGCCGCCCCCAGGTGA GAGGAGGAGCAGGAATCCTTCTTTGAGCCGCCCCCAGGTGA < 41bp 1 0.409729996587332 1 0.0959291756153107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9530377 chr11:9530372 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_40749 0 0 1 UCHL5 POSTAR2 ENCODE chr11:9530366-9530395
64251 chr22 41322439 41322439 1 + A G UCEC 41322444 + 41322424 41322464 41 CAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT CAGCCAGGCTTCTTGGCCTTCACTGCGGCCCACATGCACCT < 41bp 1 0.342758492865164 1 0.255221962928772 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322444 chr22:41322439 stoploss 0.078 0 16 hm5C_associated_SNPs_40750 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41322421-41322444
64251 chr12 110456189 110456189 1 + G A UCEC 110456173 + 110456153 110456193 41 CCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATC CCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCACATC < 41bp 1 0.387407613934635 1 0.338686764240265 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456173 chr12:110456189 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_40751 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr12 110456189 110456189 1 + G A UCEC 110456174 + 110456154 110456194 41 CTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATCT CTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCACATCT < 41bp 1 0.331973631286475 1 0.329476088285446 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110456174 chr12:110456189 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_40752 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110456176-110456190
64251 chr22 38284440 38284440 1 + G A UCEC 38284433 + 38284413 38284453 41 TGCTTTTCTTTCTCTTCTAGCTTAATCGAACCCTGAAGAAG TGCTTTTCTTTCTCTTCTAGCTTAATCAAACCCTGAAGAAG < 41bp 1 0.195322735654396 1 0.0721326470375061 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38284433 chr22:38284440 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_40753 0 0 14 U2AF2 POSTAR2 GSE83923,CSM2221659 chr22:38284420-38284440
64251 chr22 38284440 38284440 1 + G A UCEC 38284443 + 38284423 38284463 41 TCTCTTCTAGCTTAATCGAACCCTGAAGAAGATGGGACAGA TCTCTTCTAGCTTAATCAAACCCTGAAGAAGATGGGACAGA < 41bp 1 0.119704525741351 1 0.0952037870883942 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38284443 chr22:38284440 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_40754 0 0 14 U2AF2 POSTAR2 GSE83923,CSM2221659 chr22:38284420-38284440
64251 chr19 10812883 10812883 1 + A G UCEC 10812865 + 10812845 10812885 41 GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGAGA GGAGGGCGTCCGCTTCCGCTCCCCCTACGACGGCAATGGGA < 41bp 1 0.204291814586335 1 0.107497334480286 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812865 chr19:10812883 nonsynonymous SNV 0.778 0 39 hm5C_associated_SNPs_40755 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:10812871-10812912
64251 chrX 153628224 153628224 1 + C T UCEC 153628229 + 153628209 153628249 41 CATATCCGGGTGCGGCTCCACCCCTTCCACGTCATCCGCAT CATATCCGGGTGCGGTTCCACCCCTTCCACGTCATCCGCAT < 41bp 1 0.362652306024457 1 0.0519974827766418 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628229 chrX:153628224 nonsynonymous SNV 0.973 3 16 hm5C_associated_SNPs_40756 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr9 109689803 109689803 1 + A C UCEC 109689820 + 109689800 109689840 41 CGGACGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA CGGCCGGTCAAAGGGGTACTCATTCATTATCAGAAGAAGCA < 41bp 1 0.0305657979315586 1 0.0785727202892303 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109689820 chr9:109689803 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_40757 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:109689796-109689820
64251 chr17 17041249 17041249 1 + C T UCEC 17041237 + 17041217 17041257 41 CTGTCTCTTCCAGAGGAGAGCGCCATGAGTAGCGACCGCAT CTGTCTCTTCCAGAGGAGAGCGCCATGAGTAGTGACCGCAT < 41bp 1 0.552027973266156 1 0.807135820388794 experiment 0.895944053467688 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17041237 chr17:17041249 synonymous SNV . 0 33 hm5C_associated_SNPs_40759 0 0 10 BUD13 POSTAR2 ENCODE chr17:17041229-17041321
64251 chr2 207175008 207175008 1 + G A UCEC 207175003 + 207174983 207175023 41 GTGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGA GTGGCCTTAGATAAACCATGCCATCATCATCCTCCAGCAGA < 41bp 1 0.0290853436666044 1 0.0254610776901245 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175003 chr2:207175008 nonsynonymous SNV 0.084 0 26 hm5C_associated_SNPs_40760 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr2 207175008 207175008 1 + G A UCEC 207175004 + 207174984 207175024 41 TGGCCTTAGATAAACCATGCCATCGTCATCCTCCAGCAGAG TGGCCTTAGATAAACCATGCCATCATCATCCTCCAGCAGAG < 41bp 1 0.379798589703821 1 0.133205235004425 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207175004 chr2:207175008 nonsynonymous SNV 0.084 0 25 hm5C_associated_SNPs_40761 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174981-207175022
64251 chr13 103286379 103286379 1 + A G UCEC 103286380 + 103286360 103286400 41 TAACTGGACACTGAGAGGGACGCAGCTGATGAATGGAACAT TAACTGGACACTGAGAGGGGCGCAGCTGATGAATGGAACAT < 41bp 1 0.433995020316414 1 0.196266889572144 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TPP2 ENSG00000134900 CDS Human protein_coding chr13:103286380 chr13:103286379 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_40762 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:103286368-103286390
64251 chr11 44626947 44626947 1 + G A UCEC 44626956 + 44626936 44626976 41 CCCAGGTGACGGCCGGGGCCCTCTTCTACTTCAACATGGGC CCCAGGTGACGACCGGGGCCCTCTTCTACTTCAACATGGGC < 41bp 1 0.07653351421069 1 0.0353669226169586 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44626956 chr11:44626947 nonsynonymous SNV 0.052 1 12 hm5C_associated_SNPs_40763 0 0 1 SND1 POSTAR2 ENCODE chr11:44626904-44626976
64251 chr4 144336822 144336822 1 + A C UCEC 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACCC < 41bp 1 0.565250160376363 1 0.171715021133423 experiment 0.869499679247275 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336822 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_40764 0 0 2 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chrX 24091279 24091279 1 + T C UCEC 24091260 + 24091240 24091280 41 GGTGAACATAGGATCCCTGTCAACAGGAGGGAGAGTTAGTG GGTGAACATAGGATCCCTGTCAACAGGAGGGAGAGTTAGCG < 41bp 1 0.760324990045532 1 0.226854562759399 experiment 0.479350019908936 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24091260 chrX:24091279 synonymous SNV . 0 40 hm5C_associated_SNPs_40765 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:24091229-24091283
64251 chr11 65392707 65392707 1 + G A UCEC 65392705 + 65392685 65392725 41 TCTGTGGCCTCCTGGTGGCACTGTCCTACCACCTGAGCCGG TCTGTGGCCTCCTGGTGGCACTATCCTACCACCTGAGCCGG < 41bp 1 0.0698792169374027 1 0.361160039901733 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392705 chr11:65392707 synonymous SNV . 0 23 hm5C_associated_SNPs_40766 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65392679-65392707
64251 chr19 39948357 39948357 1 + G T UCEC 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATGAGTATGAGGACGAGGACCAGTGGGAGGATGTAGCAGA < 41bp 1 0.284043027411704 1 0.192401140928268 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948357 nonsynonymous SNV 0.998 3 35 hm5C_associated_SNPs_40770 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948357 39948357 1 + G T UCEC 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATGAGTATGAGGACGAGGACCAGTGGGAGGATGTAGCAGAG < 41bp 1 0.529704688518855 1 0.217215031385422 experiment 0.94059062296229 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948357 nonsynonymous SNV 0.998 3 34 hm5C_associated_SNPs_40771 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948357 39948357 1 + G T UCEC 39948360 + 39948340 39948380 41 GGACCAGTGGGAGGATGGAGCAGAGGACATTCTAGAGAAAG GGACCAGTGGGAGGATGTAGCAGAGGACATTCTAGAGAAAG < 41bp 1 0.677715128442979 1 0.866448283195496 experiment 0.644569743114042 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948360 chr19:39948357 nonsynonymous SNV 0.998 3 18 hm5C_associated_SNPs_40772 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948357 39948357 1 + G T UCEC 39948367 + 39948347 39948387 41 TGGGAGGATGGAGCAGAGGACATTCTAGAGAAAGGTGTGTG TGGGAGGATGTAGCAGAGGACATTCTAGAGAAAGGTGTGTG < 41bp 1 0.0451336935137352 1 0.0523582398891449 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948367 chr19:39948357 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_40773 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr7 77227175 77227175 1 + G A UCEC 77227168 + 77227148 77227188 41 TCTTTATTTAGGAGGATGAACAAGCAAGAACAGACTACTTC TCTTTATTTAGGAGGATGAACAAGCAAAAACAGACTACTTC < 41bp 1 0.359236608619021 1 0.327237993478775 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77227168 chr7:77227175 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_40774 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221663 chr7:77227160-77227180
64251 chr16 28845676 28845676 1 + T C UCEC 28845668 + 28845648 28845688 41 GTGTCCTCATCCCCAGGCACCTCAGATGTATCCATATCCTG GTGTCCTCATCCCCAGGCACCTCAGATGCATCCATATCCTG < 41bp 1 0.308279158115565 1 0.0719198286533356 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845668 chr16:28845676 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_40775 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:28845660-28845700
64251 chr17 78359417 78359417 1 + G A UCEC 78359407 + 78359387 78359427 41 ATGGAACAAACTGAGGAGATCGCTTGAGACGAACGGTTAGT ATGGAACAAACTGAGGAGATCGCTTGAGACAAACGGTTAGT < 41bp 1 0.0458148223299869 1 0.319346338510513 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78359407 chr17:78359417 synonymous SNV . 0 31 hm5C_associated_SNPs_40776 0 0 4 BUD13 POSTAR2 ENCODE chr17:78359380-78359422
64251 chr2 219677656 219677656 1 + T G UCEC 219677655 + 219677635 219677675 41 TTGCTTTCACAGGGAAGAAGCTGATTGATGAGAAGCTCGAA TTGCTTTCACAGGGAAGAAGCGGATTGATGAGAAGCTCGAA < 41bp 1 0.367390752472689 1 0.430353313684464 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677655 chr2:219677656 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_40777 0 0 2 PPIG POSTAR2 ENCODE chr2:219677655-219677730
64251 chr17 27011946 27011946 1 + A G UCEC 27011928 + 27011908 27011948 41 ACAGACTTCCTTCGACTGCCCCATTTTACCAAACGGCGAAC ACAGACTTCCTTCGACTGCCCCATTTTACCAAACGGCGGAC < 41bp 1 0.0877644935192354 1 0.0416757464408875 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011928 chr17:27011946 synonymous SNV . 0 39 hm5C_associated_SNPs_40778 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:27011940-27011960
64251 chr17 27011946 27011946 1 + A G UCEC 27011948 + 27011928 27011968 41 CCATTTTACCAAACGGCGAACTGCATGGAGAGAGGAAGAGC CCATTTTACCAAACGGCGGACTGCATGGAGAGAGGAAGAGC < 41bp 1 0.517869679979468 1 0.701994597911835 experiment 0.964260640041064 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27011948 chr17:27011946 synonymous SNV . 0 19 hm5C_associated_SNPs_40779 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:27011940-27011960
64251 chr9 96411441 96411441 1 + C T UCEC 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GTACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG < 41bp 1 0.468640345931913 1 0.40632763504982 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411441 synonymous SNV . 0 2 hm5C_associated_SNPs_40780 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chr17 40714711 40714711 1 + C T UCEC 40714704 + 40714684 40714724 41 TGGCCTCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCG TGGCCTCCCTAGCCCCTCGCCTGGCCTTCATCCTGACCTCG < 41bp 1 0.520797853113 1 0.288163483142853 experiment 0.958404293774 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COASY ENSG00000068120 CDS Human protein_coding chr17:40714704 chr17:40714711 nonsynonymous SNV 0.935 2 28 hm5C_associated_SNPs_40781 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr19 52195904 52195904 1 + G A UCEC 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCACA < 41bp 1 0.089812470278976 1 0.0120324194431305 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195904 . . 0 39 hm5C_associated_SNPs_40783 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr19 52195904 52195904 1 + G A UCEC 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCACAC < 41bp 1 0.366489010389209 1 0.0778210163116455 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195904 . . 0 38 hm5C_associated_SNPs_40784 0 0 12 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195900-52195920
64251 chr12 123466335 123466335 1 + G T UCEC 123466332 + 123466312 123466352 41 AAGAAGCTGAAGAAGAAGGGCAAGGAGAAGGCGGAAGCACA AAGAAGCTGAAGAAGAAGGGCAATGAGAAGGCGGAAGCACA < 41bp 1 0.135709195688634 1 0.140558302402496 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ARL6IP4 ENSG00000182196 CDS Human protein_coding chr12:123466332 chr12:123466335 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_40785 0 0 15 AGGF1 POSTAR2 ENCODE chr12:123466303-123466393
64251 chr11 45882561 45882561 1 + C T UCEC 45882565 + 45882545 45882585 41 ACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT ACGACGAGACCTACGGTGTGCCCTCCCTGGAGGAGCTGGGT < 41bp 1 0.0323743179434933 1 0.0332527458667755 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882565 chr11:45882561 synonymous SNV . 0 17 hm5C_associated_SNPs_40786 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr11 45882561 45882561 1 + C T UCEC 45882566 + 45882546 45882586 41 CGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG CGACGAGACCTACGGTGTGCCCTCCCTGGAGGAGCTGGGTG < 41bp 1 0.0480477024650461 1 0.0466641783714294 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882566 chr11:45882561 synonymous SNV . 0 16 hm5C_associated_SNPs_40787 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr12 52642513 52642513 1 + C T UCEC 52642524 + 52642504 52642544 41 TCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGA TCCGGACCGTATCCGCCAGTCGCAGGAGTGCCCGCGACTGA < 41bp 1 0.754567613295776 1 0.85947448015213 experiment 0.490864773408447 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KRT7 ENSG00000135480 CDS Human protein_coding chr12:52642524 chr12:52642513 nonsynonymous SNV 0.006 1 10 hm5C_associated_SNPs_40788 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:52642494-52642528
64251 chr19 39944012 39944012 1 + G A UCEC 39944021 + 39944001 39944041 41 CGAAGAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG CGAAGAGCGGCAGAGTGCAGCGGGCAGTGAGAAAGAAGAAG < 41bp 1 0.576859388457796 1 0.850392460823059 experiment 0.846281223084407 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944021 chr19:39944012 nonsynonymous SNV 0.827 1 12 hm5C_associated_SNPs_40789 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr19 39944012 39944012 1 + G A UCEC 39944025 + 39944005 39944045 41 GAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC GAGCGGCAGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC < 41bp 1 0.322095384275617 1 0.377170979976654 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944025 chr19:39944012 nonsynonymous SNV 0.827 1 8 hm5C_associated_SNPs_40790 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr6 155154527 155154527 1 + T C UCEC 155154525 + 155154505 155154545 41 AAGCACAGAAACTGAGGGGACATAATCATCACTCAGTAGGT AAGCACAGAAACTGAGGGGACACAATCATCACTCAGTAGGT < 41bp 1 0.357933100650755 1 0.276166796684265 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155154525 chr6:155154527 stoploss 1.000 0 23 hm5C_associated_SNPs_40791 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:155154453-155154531
64251 chr7 150769170 150769170 1 + G A UCEC 150769166 + 150769146 150769186 41 TCCCGCTTCACCCAGGAGATCTTCGCCTTCTTGATCTCACT TCCCGCTTCACCCAGGAGATCTTCACCTTCTTGATCTCACT < 41bp 1 0.116237424840985 1 0.0549403727054596 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769166 chr7:150769170 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_40793 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chr17 18137994 18137994 1 + T G UCEC 18138006 + 18137986 18138026 41 AACAAGATTCTGTGGCGGAACTGTGAATCTGGGTAGGTCGA AACAAGATGCTGTGGCGGAACTGTGAATCTGGGTAGGTCGA < 41bp 1 0.304845109998648 1 0.492230206727982 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18138006 chr17:18137994 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_40794 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18137980-18138008
64251 chr17 80529646 80529646 1 + C T UCEC 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGTGATTACG < 41bp 1 0.0837909712623568 1 0.0493823885917664 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529646 nonsynonymous SNV 0.488 5 34 hm5C_associated_SNPs_40795 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:80529622-80529666
64251 chr8 17810632 17810632 1 + A C UCEC 17810614 + 17810594 17810634 41 TTTTTAGCAAAATGAGAGTGCTACAGGAAAAGAAACAAAAA TTTTTAGCAAAATGAGAGTGCTACAGGAAAAGAAACAACAA < 41bp 1 0.519241238290571 1 0.387739539146423 experiment 0.961517523418858 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17810614 chr8:17810632 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_40796 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17810595-17810633
64251 chr20 49197898 49197898 1 + C T UCEC 49197914 + 49197894 49197934 41 TGCCCGAGAAGGACGAGGACCATGCACTGAGTTACTGGAAG TGCCTGAGAAGGACGAGGACCATGCACTGAGTTACTGGAAG < 41bp 1 0.147973924630013 1 0.274630486965179 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197914 chr20:49197898 synonymous SNV . 0 5 hm5C_associated_SNPs_40797 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:49197879-49197927
64251 chr15 64410413 64410413 1 + T G UCEC 64410406 + 64410386 64410426 41 TTCTCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCC TTCTCTTCCTCCTCAGGAAGCCACAAAGTCTTCGAAGCCCC < 41bp 1 0.263900219258328 1 0.174763232469559 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410406 chr15:64410413 nonsynonymous SNV 0.972 0 28 hm5C_associated_SNPs_40799 0 0 2 DDX24 POSTAR2 ENCODE chr15:64410373-64410444
64251 chr15 64410413 64410413 1 + T G UCEC 64410409 + 64410389 64410429 41 TCTTCCTCCTCAGGAAGCCACAAATTCTTCGAAGCCCCAGC TCTTCCTCCTCAGGAAGCCACAAAGTCTTCGAAGCCCCAGC < 41bp 1 0.338281142746099 1 0.574059844017029 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64410409 chr15:64410413 nonsynonymous SNV 0.972 0 25 hm5C_associated_SNPs_40800 0 0 2 DDX24 POSTAR2 ENCODE chr15:64410373-64410444
64251 chr7 2473386 2473386 1 + G T UCEC 2473368 + 2473348 2473388 41 GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACAGGA GGACCGGCAGCTCCGCTTCCCCCCGAGCTACCGGAACATGA < 41bp 1 0.355585641356686 1 0.0731455087661743 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473368 chr7:2473386 nonsynonymous SNV 0.952 4 39 hm5C_associated_SNPs_40801 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chr1 43162425 43162425 1 + G A UCEC 43162444 + 43162424 43162464 41 CGCAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGA CACAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGA < 41bp 1 0.532414489341445 1 0.206440895795822 experiment 0.93517102131711 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162444 chr1:43162425 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_40802 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:43162398-43162425
64251 chr12 50480641 50480641 1 + G A UCEC 50480623 + 50480603 50480643 41 ACCAGACTATCATGAGGAAACGGCTAGATATCCAAGAGGCC ACCAGACTATCATGAGGAAACGGCTAGATATCCAAGAGACC < 41bp 1 0.357491729733162 1 0.289781153202057 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50480623 chr12:50480641 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_40803 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:50480623-50480648
64251 chr9 130420674 130420674 1 + C T UCEC 130420683 + 130420663 130420703 41 ATATCAATAAGCGCAGAGAGCCGCTCCCCAGCCTGGAGGCT ATATCAATAAGTGCAGAGAGCCGCTCCCCAGCCTGGAGGCT < 41bp 1 0.0948721698619646 1 0.0952309966087341 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130420683 chr9:130420674 nonsynonymous SNV 0.995 3 12 hm5C_associated_SNPs_40804 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:130420654-130420756
64251 chr7 100732045 100732045 1 + C A UCEC 100732032 + 100732012 100732052 41 GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGCTCTGGCC GCCCAGCCCAGCCCTGGGGCCGAATCTGGACGGATCTGGCC < 41bp 1 0.226365789428311 1 0.183794647455215 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732032 chr7:100732045 synonymous SNV . 0 34 hm5C_associated_SNPs_40806 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100732007-100732076
64251 chrX 69639541 69639541 1 + G T UCEC 69639552 + 69639532 69639572 41 CGGACCCAGGATTCCGAAGGCTCCTTCAAACTGGAGGATCC CGGACCCAGTATTCCGAAGGCTCCTTCAAACTGGAGGATCC < 41bp 1 0.307855501170317 1 0.342208862304688 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639552 chrX:69639541 nonsynonymous SNV 0.981 2 10 hm5C_associated_SNPs_40807 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69639528-69639546
64251 chr5 134099692 134099692 1 + G A UCEC 134099676 + 134099656 134099696 41 CCTCAGACAAAAGAAGTAAACGTGGAGATGACAGACGGTCT CCTCAGACAAAAGAAGTAAACGTGGAGATGACAGACAGTCT < 41bp 1 0.722466257790849 1 0.664348006248474 experiment 0.555067484418301 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099676 chr5:134099692 nonsynonymous SNV 0.989 2 37 hm5C_associated_SNPs_40809 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr5 134099692 134099692 1 + G A UCEC 134099687 + 134099667 134099707 41 AGAAGTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGA AGAAGTAAACGTGGAGATGACAGACAGTCTAGAAGTAGAGA < 41bp 1 0.446685003632258 1 0.163330644369125 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099687 chr5:134099692 nonsynonymous SNV 0.989 2 26 hm5C_associated_SNPs_40810 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr5 134099692 134099692 1 + G A UCEC 134099691 + 134099671 134099711 41 GTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGATAGA GTAAACGTGGAGATGACAGACAGTCTAGAAGTAGAGATAGA < 41bp 1 0.320766171637632 1 0.453195571899414 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099691 chr5:134099692 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_40811 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr3 188242461 188242461 1 + C T UCEC 188242472 + 188242452 188242492 41 GGGGAATCCCGGAGGCAAGACACTTGAGGAGAGGCGCTCCA GGGGAATCCTGGAGGCAAGACACTTGAGGAGAGGCGCTCCA < 41bp 1 0.179251537034509 1 0.0409992039203644 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPP ENSG00000145012 CDS Human protein_coding chr3:188242472 chr3:188242461 synonymous SNV . 0 10 hm5C_associated_SNPs_40812 0 0 2 PPIG POSTAR2 ENCODE chr3:188242450-188242511
64251 chr2 27459283 27459283 1 + C T UCEC 27459284 + 27459264 27459304 41 CAATGCGTGGAGCTGGGGGCCGGCGTCTCTCTTCCTTTGTC CAATGCGTGGAGCTGGGGGTCGGCGTCTCTCTTCCTTTGTC < 41bp 1 0.566667113764253 1 0.817685186862946 experiment 0.866665772471493 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27459284 chr2:27459283 synonymous SNV . 0 20 hm5C_associated_SNPs_40813 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27459280-27459301
64251 chr1 28862534 28862534 1 + G T UCEC 28862519 + 28862499 28862539 41 CACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGG CACGTGTACGGCTTCGGCCTCTCCAACTACCATCATCTTGG < 41bp 1 0.702408126943619 1 0.897602379322052 experiment 0.595183746112763 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862519 chr1:28862534 nonsynonymous SNV 0.995 3 36 hm5C_associated_SNPs_40815 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:28862460-28862540
64251 chrX 153627880 153627880 1 + G A UCEC 153627896 + 153627876 153627916 41 ATGAGTTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT ATGAATTTCCGCTTTGTGGCCACATGGTGTCAGATGAATAT < 41bp 1 0.251642852405071 1 0.523244261741638 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627896 chrX:153627880 synonymous SNV . 0 5 hm5C_associated_SNPs_40816 0 0 76 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:153627840-153627880
64251 chr5 132203231 132203231 1 + G T UCEC 132203216 + 132203196 132203236 41 TCTTATCTACACATGGGGGACTGAAGAGTTCGAGAGATCCA TCTTATCTACACATGGGGGACTGAAGAGTTCGAGATATCCA < 41bp 1 0.593511754766195 1 0.231553018093109 experiment 0.81297649046761 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132203216 chr5:132203231 nonsynonymous SNV 0.808 1 36 hm5C_associated_SNPs_40817 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132203150-132203387
64251 chr17 66039322 66039322 1 + G A UCEC 66039310 + 66039290 66039330 41 TGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGC TGCTGTTGAGCAGATTCTTCCTACCTTAGTTCAGCTCCTGC < 41bp 1 0.355320707518841 1 0.19946151971817 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039310 chr17:66039322 nonsynonymous SNV 0.951 0 33 hm5C_associated_SNPs_40818 0 0 37 FMR1 POSTAR2 GSE39682,GSM977615 chr17:66039220-66039333
64251 chr14 75359606 75359606 1 + C T UCEC 75359614 + 75359594 75359634 41 AACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATA AACCTACAGCAGTGGCAGTTCCTCCCCCTGCAGCACCCATA < 41bp 1 0.127526255745131 1 0.203304588794708 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359614 chr14:75359606 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_40819 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:75359593-75359623
64251 chr20 34776333 34776333 1 + G A UCEC 34776322 + 34776302 34776342 41 TGTGCCAATGGCCTGCTCATCTACCGGGACCGGCTGAGAAT TGTGCCAATGGCCTGCTCATCTACCGGGACCAGCTGAGAAT < 41bp 1 0.364598953890169 1 0.166020840406418 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EPB41L1 ENSG00000088367 CDS Human protein_coding chr20:34776322 chr20:34776333 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_40820 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:34776313-34776337
64251 chr1 29651769 29651769 1 + C T UCEC 29651781 + 29651761 29651801 41 CGCTGCCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAAC CGCTGCCATAACTTGGTGGACGTTTTCTTTGCTGCCAAAAC < 41bp 1 0.0454215856983926 1 0.0421985983848572 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPRU ENSG00000060656 CDS Human protein_coding chr1:29651781 chr1:29651769 synonymous SNV . 0 9 hm5C_associated_SNPs_40822 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29651757-29651782
64251 chrX 205491 205491 1 + G A UCEC 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTACCCTGCATCACGCGCCCTGTCGTGCTGAA < 41bp 1 0.405765583124037 1 0.0931351780891418 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205491 synonymous SNV . 0 12 hm5C_associated_SNPs_40823 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:205487-205497
64251 chr12 32138431 32138431 1 + C T UCEC 32138422 + 32138402 32138442 41 TCTAAAGAATCATTAAATGGCTTGACAAGCCATGGTAAAAA TCTAAAGAATCATTAAATGGCTTGACAAGTCATGGTAAAAA < 41bp 1 0.410179013620775 1 0.0827826857566833 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32138422 chr12:32138431 synonymous SNV . 0 30 hm5C_associated_SNPs_40826 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:32138420-32138440
64251 chr21 30701856 30701856 1 + G T UCEC 30701844 + 30701824 30701864 41 ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAG ATGCACAACGGATAATTTCACTGTCTCGAAATTATTTTCAG < 41bp 1 0.18615424874551 1 0.160888373851776 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BACH1 ENSG00000156273 CDS Human protein_coding chr21:30701844 chr21:30701856 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_40828 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30701822-30701863
64251 chr5 70952650 70952650 1 + C T UCEC 70952640 + 70952620 70952660 41 GTCTCAGTTTTAGTGCAGCCCTCAACGCACCAATAGAGAAG GTCTCAGTTTTAGTGCAGCCCTCAACGCACTAATAGAGAAG < 41bp 1 0.545445611118612 1 0.579644799232483 experiment 0.909108777762775 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MCCC2 ENSG00000131844 CDS Human protein_coding chr5:70952640 chr5:70952650 nonsynonymous SNV 0.221 4 31 hm5C_associated_SNPs_40829 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:70952650-70952651
64251 chr12 54741614 54741614 1 + A C UCEC 54741594 + 54741574 54741614 41 TGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAA TGCTGGAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAC < 41bp 1 0.235527985289289 1 0.0965057909488678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COPZ1 ENSG00000111481 CDS Human protein_coding chr12:54741594 chr12:54741614 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_40830 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:54741554-54741614
64251 chr12 54741614 54741614 1 + A C UCEC 54741599 + 54741579 54741619 41 GAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGT GAGAACATGGAGGGGCTGTTCTTGGCTGTGGATGACATTGT < 41bp 1 0.668352771463389 1 0.135548114776611 experiment 0.663294457073222 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COPZ1 ENSG00000111481 CDS Human protein_coding chr12:54741599 chr12:54741614 nonsynonymous SNV 0.999 4 36 hm5C_associated_SNPs_40831 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:54741554-54741614
64251 chr12 54741614 54741614 1 + A C UCEC 54741604 + 54741584 54741624 41 CATGGAGGGGCTGTTCTTGGCTGTGGATGAAATTGTAGATG CATGGAGGGGCTGTTCTTGGCTGTGGATGACATTGTAGATG < 41bp 1 0.712928788561178 1 0.204708456993103 experiment 0.574142422877645 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COPZ1 ENSG00000111481 CDS Human protein_coding chr12:54741604 chr12:54741614 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_40832 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:54741554-54741614
64251 chr11 119001568 119001568 1 + C T UCEC 119001554 + 119001534 119001574 41 AGCTGAAACAGTGGGGGCTGCAGGCCTTGCAAAGCCAGGCT AGCTGAAACAGTGGGGGCTGCAGGCCTTGCAAAGTCAGGCT < 41bp 1 0.669616775152656 1 0.704294264316559 experiment 0.660766449694689 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HINFP ENSG00000172273 CDS Human protein_coding chr11:119001554 chr11:119001568 synonymous SNV . 0 35 hm5C_associated_SNPs_40833 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:119001568-119001569
64251 chr14 71444272 71444272 1 + C A UCEC 71444269 + 71444249 71444289 41 AGCTATAAAAGTGAGCAGACCAGCTCAACTCACATAGAGAG AGCTATAAAAGTGAGCAGACCAGATCAACTCACATAGAGAG < 41bp 1 0.137473781270464 1 0.593022167682648 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444269 chr14:71444272 nonsynonymous SNV 0.978 4 24 hm5C_associated_SNPs_40835 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:71444236-71444274
64251 chr17 65722751 65722751 1 + A G UCEC 65722746 + 65722726 65722766 41 ACGTCGCAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT ACGTCGCAGTCCTAGGAAGTCCACTGGCAGCTTCTAAGGGT < 41bp 1 0.502566150478456 1 0.319453001022339 experiment 0.994867699043089 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722746 chr17:65722751 synonymous SNV . 0 26 hm5C_associated_SNPs_40836 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:65722692-65722752
64251 chr8 1806233 1806233 1 + G A UCEC 1806226 + 1806206 1806246 41 CCAGAAGCGGACAGACAGGCCCCATCCGCCCCTGAGACAGG CCAGAAGCGGACAGACAGGCCCCATCCACCCCTGAGACAGG < 41bp 1 0.09477681258586 1 0.115866780281067 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1806226 chr8:1806233 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_40837 0 0 5 DDX24 POSTAR2 ENCODE chr8:1806174-1806261
64251 chr2 33526656 33526656 1 + T C UCEC 33526650 + 33526630 33526670 41 CAGTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGA CAGTGCAGGAACACTGAGGGCTCTTTCCAATGTGTGTGTGA < 41bp 1 0.101843009562702 1 0.0892471373081207 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526650 chr2:33526656 synonymous SNV . 0 27 hm5C_associated_SNPs_40838 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:33526655-33526656
64251 chr2 33526656 33526656 1 + T C UCEC 33526652 + 33526632 33526672 41 GTGCAGGAACACTGAGGGCTCTTTTCAATGTGTGTGTGACC GTGCAGGAACACTGAGGGCTCTTTCCAATGTGTGTGTGACC < 41bp 1 0.0324034360265821 1 0.0837701857089996 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33526652 chr2:33526656 synonymous SNV . 0 25 hm5C_associated_SNPs_40839 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:33526655-33526656
64251 chr6 158492640 158492640 1 + A G UCEC 158492660 + 158492640 158492680 41 AGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG GGCCATCGACACAGTGAAGACGGGCATGGGGGGCAAGGCGG < 41bp 1 0.734966677577429 1 0.625380396842957 experiment 0.530066644845143 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492660 chr6:158492640 synonymous SNV . 0 1 hm5C_associated_SNPs_40840 0 0 5 SF3A3 POSTAR2 ENCODE chr6:158492585-158492646
64251 chr14 71434932 71434932 1 + G A UCEC 71434922 + 71434902 71434942 41 GTCACGTTTTCAGATTGGATCTGGTTCCTCGCGTCTTGGAA GTCACGTTTTCAGATTGGATCTGGTTCCTCACGTCTTGGAA < 41bp 1 0.181450067259427 1 0.451758801937103 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71434922 chr14:71434932 synonymous SNV . 0 31 hm5C_associated_SNPs_40842 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr14:71434914-71434940
64251 chr12 112926254 112926254 1 + A C UCEC 112926274 + 112926254 112926294 41 ATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT CTTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT < 41bp 1 0.151390570175195 1 0.0162136256694794 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926274 chr12:112926254 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_40843 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112926227-112926265
64251 chr2 153494186 153494186 1 + A G UCEC 153494168 + 153494148 153494188 41 TCTTCTTTCCTGTCTTTGTCCGGTTTGTGAAAGCATATAAG TCTTCTTTCCTGTCTTTGTCCGGTTTGTGAAAGCATATGAG < 41bp 1 0.18663751799601 1 0.303786516189575 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FMNL2 ENSG00000157827 CDS Human protein_coding chr2:153494168 chr2:153494186 nonsynonymous SNV 0.986 2 39 hm5C_associated_SNPs_40844 0 0 1 PRPF8 POSTAR2 ENCODE chr2:153494179-153494224
64251 chr2 120005513 120005513 1 + C T UCEC 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTGTCCGTGTCCGTGGTCAAC < 41bp 1 0.14620799628848 1 0.0165750682353973 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005513 nonsynonymous SNV 0.963 3 24 hm5C_associated_SNPs_40845 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr9 114296044 114296044 1 + C A UCEC 114296051 + 114296031 114296071 41 TTGAAGGATGTAGCTGTGAACTTTTCAAGAGGAGAGTGGAA TTGAAGGATGTAGATGTGAACTTTTCAAGAGGAGAGTGGAA < 41bp 1 0.0496633065535918 1 0.0326229929924011 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF483 ENSG00000173258 CDS Human protein_coding chr9:114296051 chr9:114296044 nonsynonymous SNV 0.020 0 14 hm5C_associated_SNPs_40846 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:114296031-114296058
64251 chr5 175933841 175933841 1 + C T UCEC 175933837 + 175933817 175933857 41 CAGATTGAAGCCAATTTTCCCAGGCGAGTGCTGCCCTGCAT CAGATTGAAGCCAATTTTCCCAGGTGAGTGCTGCCCTGCAT < 41bp 1 0.777501745501496 1 0.887956142425537 experiment 0.444996508997008 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933837 chr5:175933841 stopgain 0.999 1 25 hm5C_associated_SNPs_40848 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr5 175933841 175933841 1 + C T UCEC 175933855 + 175933835 175933875 41 CCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC CCCAGGTGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC < 41bp 1 0.103021394415488 1 0.0817488729953766 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933855 chr5:175933841 stopgain 0.999 1 7 hm5C_associated_SNPs_40849 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:175933806-175933844
64251 chr6 42974215 42974215 1 + C G UCEC 42974203 + 42974183 42974223 41 GGTGACTTGTTTGACCAGGCCCAGCCGCAGCCCCAGCCCCA GGTGACTTGTTTGACCAGGCCCAGCCGCAGCCGCAGCCCCA < 41bp 1 0.239428079528686 1 0.0734295248985291 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42974203 chr6:42974215 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_40850 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:42974215-42974216
64251 chr11 65402558 65402558 1 + G A UCEC 65402544 + 65402524 65402564 41 TTGCCGACATGGACCTGCTTCACCGCGTTGTGGCGCCTGGG TTGCCGACATGGACCTGCTTCACCGCGTTGTGGCACCTGGG < 41bp 1 0.230490657690006 1 0.0934309065341949 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402544 chr11:65402558 synonymous SNV . 0 35 hm5C_associated_SNPs_40851 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65402556-65402582
64251 chr12 94072686 94072686 1 + G A UCEC 94072701 + 94072681 94072721 41 TCAATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTG TCAATACTCAAACCACAGGCCTCCGGAAAACAATGCTCCTG < 41bp 1 0.498938810828685 1 0.773498773574829 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072701 chr12:94072686 nonsynonymous SNV 0.960 1 6 hm5C_associated_SNPs_40853 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr12 94072686 94072686 1 + G A UCEC 94072703 + 94072683 94072723 41 AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT AATACTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT < 41bp 1 0.628378857862658 1 0.592214286327362 experiment 0.743242284274685 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072703 chr12:94072686 nonsynonymous SNV 0.960 1 4 hm5C_associated_SNPs_40854 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr1 235600751 235600751 1 + G A UCEC 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTATCACCAGCATTGGC < 41bp 1 0.583092504178278 1 0.0608178377151489 experiment 0.833814991643443 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600751 nonsynonymous SNV 0.019 3 30 hm5C_associated_SNPs_40855 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr1 24996668 24996668 1 + C T UCEC 24996652 + 24996632 24996672 41 GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGT GTCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCTGGGT < 41bp 1 0.164792052211706 1 0.0508123934268951 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996652 chr1:24996668 synonymous SNV . 0 37 hm5C_associated_SNPs_40857 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996668 24996668 1 + C T UCEC 24996653 + 24996633 24996673 41 TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCCGGGTC TCTGTAAGAAGGGTCTCATCCTCCCGATCTGTCTCTGGGTC < 41bp 1 0.748481934430645 1 0.431284606456757 experiment 0.50303613113871 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996653 chr1:24996668 synonymous SNV . 0 36 hm5C_associated_SNPs_40858 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996668 24996668 1 + C T UCEC 24996673 + 24996653 24996693 41 CTCCCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAA CTCCCGATCTGTCTCTGGGTCTCCTGAGCCAGCAGCTAAAA < 41bp 1 0.58067506505866 1 0.0299160182476044 experiment 0.838649869882681 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996673 chr1:24996668 synonymous SNV . 0 16 hm5C_associated_SNPs_40859 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996668 24996668 1 + C T UCEC 24996676 + 24996656 24996696 41 CCGATCTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGC CCGATCTGTCTCTGGGTCTCCTGAGCCAGCAGCTAAAAAGC < 41bp 1 0.626494829821262 1 0.312501013278961 experiment 0.747010340357475 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996676 chr1:24996668 synonymous SNV . 0 13 hm5C_associated_SNPs_40860 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996668 24996668 1 + C T UCEC 24996681 + 24996661 24996701 41 CTGTCTCCGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA CTGTCTCTGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCA < 41bp 1 0.289302244921278 1 0.505124926567078 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996681 chr1:24996668 synonymous SNV . 0 8 hm5C_associated_SNPs_40861 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr1 24996668 24996668 1 + C T UCEC 24996688 + 24996668 24996708 41 CGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC TGGGTCTCCTGAGCCAGCAGCTAAAAAGCCCCCAGCACCTC < 41bp 1 0.656668906896824 1 0.557553887367249 experiment 0.686662186206353 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996688 chr1:24996668 synonymous SNV . 0 1 hm5C_associated_SNPs_40862 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24996663-24996687
64251 chr16 722956 722956 1 + G A UCEC 722951 + 722931 722971 41 CATTACATGGACGGGCAGACCCCCTGCCTCTTTGTCTCCTC CATTACATGGACGGGCAGACCCCCTACCTCTTTGTCTCCTC < 41bp 1 0.307738712021278 1 0.135344386100769 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722951 chr16:722956 nonsynonymous SNV 0.985 4 26 hm5C_associated_SNPs_40863 0 0 4 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr9 131847006 131847006 1 + G A UCEC 131846999 + 131846979 131847019 41 AGCCTCAGCCCTGTATTTGTCATCGTCGGTTTCGTGACCCT AGCCTCAGCCCTGTATTTGTCATCGTCAGTTTCGTGACCCT < 41bp 1 0.471203206012283 1 0.371700823307037 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846999 chr9:131847006 nonsynonymous SNV 0.539 1 28 hm5C_associated_SNPs_40864 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:131846968-131847009
64251 chr14 96997923 96997923 1 + G A UCEC 96997917 + 96997897 96997937 41 ATATAAGATGTATAAGAAGTCTTAACGGTATGAGAAAGCCT ATATAAGATGTATAAGAAGTCTTAACAGTATGAGAAAGCCT < 41bp 1 0.245519799920278 1 0.0962882041931152 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96997917 chr14:96997923 nonsynonymous SNV 0.993 4 27 hm5C_associated_SNPs_40866 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr14:96997768-96997937
64251 chr16 69726077 69726077 1 + A G UCEC 69726090 + 69726070 69726110 41 CATCACCAAATAGTGTGAGTCAGCTTCAGAATACTATTCAG CATCACCGAATAGTGTGAGTCAGCTTCAGAATACTATTCAG < 41bp 1 0.37524813594162 1 0.719815254211426 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFAT5 ENSG00000102908 CDS Human protein_coding chr16:69726090 chr16:69726077 synonymous SNV . 0 8 hm5C_associated_SNPs_40867 0 0 15 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:69726047-69726079
64251 chr1 86048589 86048589 1 + G A UCEC 86048579 + 86048559 86048599 41 TGACCAGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGG TGACCAGGACTGTGAAGATGCGGTTCCGCTACGAAGATGGG < 41bp 1 0.271199392773917 1 0.0992070734500885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048579 chr1:86048589 nonsynonymous SNV 0.996 5 31 hm5C_associated_SNPs_40869 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048589 86048589 1 + G A UCEC 86048584 + 86048564 86048604 41 AGGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGAC AGGACTGTGAAGATGCGGTTCCGCTACGAAGATGGGGAGAC < 41bp 1 0.294784889951706 1 0.0917386710643768 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048584 chr1:86048589 nonsynonymous SNV 0.996 5 26 hm5C_associated_SNPs_40870 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048589 86048589 1 + G A UCEC 86048585 + 86048565 86048605 41 GGACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACA GGACTGTGAAGATGCGGTTCCGCTACGAAGATGGGGAGACA < 41bp 1 0.611712350242429 1 0.195672959089279 experiment 0.776575299515141 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048585 chr1:86048589 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_40871 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr1 86048589 86048589 1 + G A UCEC 86048587 + 86048567 86048607 41 ACTGTGAAGATGCGGTTCCGCTGCGAAGATGGGGAGACATT ACTGTGAAGATGCGGTTCCGCTACGAAGATGGGGAGACATT < 41bp 1 0.669286816449924 1 0.0844767391681671 experiment 0.661426367100152 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048587 chr1:86048589 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_40872 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chr9 135947059 135947059 1 + C T UCEC 135947046 + 135947026 135947066 41 CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCCCTGTGCC CCCGTGCCGCCCACGGGTGACTCCGGGGCCCCCTCTGTGCC < 41bp 1 0.701933237042531 1 0.823758482933044 experiment 0.596133525914938 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEL ENSG00000170835 CDS Human protein_coding chr9:135947046 chr9:135947059 nonsynonymous SNV 0.001 1 34 hm5C_associated_SNPs_40873 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:135947044-135947107
64251 chr17 78022552 78022552 1 + C T UCEC 78022532 + 78022512 78022552 41 GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACC GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACT < 41bp 1 0.207937218512647 1 0.239990025758743 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022532 chr17:78022552 nonsynonymous SNV 0.991 3 41 hm5C_associated_SNPs_40874 0 0 1 PPIG POSTAR2 ENCODE chr17:78022382-78022564
64251 chr12 104336951 104336951 1 + G A UCEC 104336943 + 104336923 104336963 41 GGATGAATACTGTATTCAGGCCCTTCCCGAATTTGATGGGA GGATGAATACTGTATTCAGGCCCTTCCCAAATTTGATGGGA < 41bp 1 0.0737234134917424 1 0.0560506880283356 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336943 chr12:104336951 nonsynonymous SNV 0.980 2 29 hm5C_associated_SNPs_40875 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104336850-104336954
64251 chr12 104336951 104336951 1 + G A UCEC 104336944 + 104336924 104336964 41 GATGAATACTGTATTCAGGCCCTTCCCGAATTTGATGGGAA GATGAATACTGTATTCAGGCCCTTCCCAAATTTGATGGGAA < 41bp 1 0.00481567625971354 1 0.0942005217075348 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336944 chr12:104336951 nonsynonymous SNV 0.980 2 28 hm5C_associated_SNPs_40876 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104336850-104336954
64251 chr1 228333237 228333237 1 + G T UCEC 228333243 + 228333223 228333263 41 CCCAGGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAA CCCAGGCCTGTGGTTCTGAGCGGGCCTTCGGGAGCTGGGAA < 41bp 1 0.730558839949276 1 0.856442809104919 experiment 0.538882320101448 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333243 chr1:228333237 nonsynonymous SNV 0.775 1 15 hm5C_associated_SNPs_40877 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228333200-228333240
64251 chr1 228333237 228333237 1 + G T UCEC 228333247 + 228333227 228333267 41 GGCCTGTGGTGCTGAGCGGGCCTTCGGGAGCTGGGAAGAGC GGCCTGTGGTTCTGAGCGGGCCTTCGGGAGCTGGGAAGAGC < 41bp 1 0.0416806172699008 1 0.105187177658081 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333247 chr1:228333237 nonsynonymous SNV 0.775 1 11 hm5C_associated_SNPs_40878 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228333200-228333240
64251 chr3 124351531 124351531 1 + A G UCEC 124351528 + 124351508 124351548 41 GCCTGGGGATGAAACAACCCCTCAGGGAGACAGCGCTGATG GCCTGGGGATGAAACAACCCCTCGGGGAGACAGCGCTGATG < 41bp 1 0.543579802470119 1 0.625898838043213 experiment 0.912840395059762 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KALRN ENSG00000160145 CDS Human protein_coding chr3:124351528 chr3:124351531 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_40879 0 0 3 BUD13 POSTAR2 ENCODE chr3:124351485-124351581
64251 chr11 43465656 43465656 1 + A G UCEC 43465648 + 43465628 43465668 41 TAAAGAAACCCAAAGGAGATCATAAGAAAACTCCTGGGAAA TAAAGAAACCCAAAGGAGATCATAAGAAGACTCCTGGGAAA < 41bp 1 0.412525968430631 1 0.347854942083359 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43465648 chr11:43465656 synonymous SNV . 0 29 hm5C_associated_SNPs_40881 0 0 5 GRWD1 POSTAR2 ENCODE chr11:43465604-43465669
64251 chr7 98564668 98564668 1 + C T UCEC 98564687 + 98564667 98564707 41 CCTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGATGAT CTTACACTCCGGGAGAAGTCCATTTTGCTTGTGAAGATGAT < 41bp 1 0.0105607238212938 1 0.105094760656357 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98564687 chr7:98564668 nonsynonymous SNV 0.992 3 2 hm5C_associated_SNPs_40882 0 0 8 EWSR1 POSTAR2 SRX029344 chr7:98564663-98564693
64251 chr1 44134866 44134866 1 + T C UCEC 44134847 + 44134827 44134867 41 AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTG AGGAGGTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCCG < 41bp 1 0.233157541517163 1 0.0301547050476074 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134847 chr1:44134866 nonsynonymous SNV 0.997 2 40 hm5C_associated_SNPs_40884 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr1 249211782 249211782 1 + A T UCEC 249211767 + 249211747 249211787 41 AGGAGCTTGGATCTAGGAGGCAGTATGGTAATAAAATTTGT AGGAGCTTGGATCTAGGAGGCAGTATGGTAATAAATTTTGT < 41bp 1 0.50543034311717 1 0.418365806341171 experiment 0.98913931376566 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211767 chr1:249211782 nonsynonymous SNV 0.906 0 36 hm5C_associated_SNPs_40885 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:249211782-249211783
64251 chr21 47864708 47864708 1 + A G UCEC 47864706 + 47864686 47864726 41 ATTCACCATTTAGAAGTGATCCAGCAAAGATTGGGAGGGGT ATTCACCATTTAGAAGTGATCCGGCAAAGATTGGGAGGGGT < 41bp 1 0.0792635236223007 1 0.486805528402328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCNT ENSG00000160299 CDS Human protein_coding chr21:47864706 chr21:47864708 nonsynonymous SNV 0.863 3 23 hm5C_associated_SNPs_40886 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr21:47864696-47864710
64251 chr18 2751374 2751374 1 + A G UCEC 2751377 + 2751357 2751397 41 AGCTGTCTACCAGTGGGAACCGACCCCCAGCAAATGTGAGT AGCTGTCTACCAGTGGGGACCGACCCCCAGCAAATGTGAGT < 41bp 1 0.109474287888026 1 0.286013722419739 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2751377 chr18:2751374 nonsynonymous SNV 0.752 0 18 hm5C_associated_SNPs_40887 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:2751364-2751392
64251 chr9 131345012 131345012 1 + C T UCEC 131345031 + 131345011 131345051 41 GCGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC GTGTCGCCGGGCCCAGCTAGCCGATTCTTTCCATCTGCAGC < 41bp 1 0.123077994203053 1 0.0947505533695221 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131345031 chr9:131345012 nonsynonymous SNV 0.952 1 2 hm5C_associated_SNPs_40889 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:131345000-131345020
64251 chr7 4824583 4824583 1 + G A UCEC 4824600 + 4824580 4824620 41 TCCGCCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA TCCACCACCTCCTCTGCCGGCCGCCTGCTGCCGCCCCGGGA < 41bp 1 0.119906848687955 1 0.33564293384552 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AP5Z1 ENSG00000242802 CDS Human protein_coding chr7:4824600 chr7:4824583 nonsynonymous SNV 0.036 0 4 hm5C_associated_SNPs_40891 0 0 3 BUD13 POSTAR2 ENCODE chr7:4824538-4824608
64251 chr1 109441601 109441601 1 + C T UCEC 109441598 + 109441578 109441618 41 ATTTCTTGGTGAATTTGAAACTGCCTCGGAATACTACAAGT ATTTCTTGGTGAATTTGAAACTGTCTCGGAATACTACAAGT < 41bp 1 0.153424193089249 1 0.121497541666031 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109441598 chr1:109441601 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_40892 0 0 1 FUS POSTAR2 SRX029328 chr1:109441594-109441617
64251 chr19 18888185 18888185 1 + G A UCEC 18888174 + 18888154 18888194 41 CCAGCCACCGAGGACACCTTCCGGATGGACCGCCTGTGAGC CCAGCCACCGAGGACACCTTCCGGATGGACCACCTGTGAGC < 41bp 1 0.71701983616506 1 0.86760938167572 experiment 0.56596032766988 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRTC1 ENSG00000105662 CDS Human protein_coding chr19:18888174 chr19:18888185 nonsynonymous SNV 0.998 3 32 hm5C_associated_SNPs_40893 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18888139-18888189
64251 chr12 98925507 98925507 1 + A G UCEC 98925505 + 98925485 98925525 41 AGCTTTTGAAACTGAGGGAACAAGGAACAGAATCAAGATCT AGCTTTTGAAACTGAGGGAACAGGGAACAGAATCAAGATCT < 41bp 1 0.733540519561283 1 0.700898885726929 experiment 0.532918960877434 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98925505 chr12:98925507 synonymous SNV . 0 23 hm5C_associated_SNPs_40900 0 0 40 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:98925460-98925520
64251 chr2 173451088 173451088 1 + G A UCEC 173451098 + 173451078 173451118 41 CCAAGACCTCGTGTTGAGACCTCCCGCGCAGTGCCTCTGGT CCAAGACCTCATGTTGAGACCTCCCGCGCAGTGCCTCTGGT < 41bp 1 0.336605043109947 1 0.578772306442261 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451098 chr2:173451088 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_40901 0 0 3 PPIG POSTAR2 ENCODE chr2:173451054-173451117
64251 chr19 16212141 16212141 1 + A G UCEC 16212142 + 16212122 16212162 41 TGGATCAGACACTAAACGAACTTAACTGTATATAAGCAAAA TGGATCAGACACTAAACGAGCTTAACTGTATATAAGCAAAA < 41bp 1 0.133095686217058 1 0.0434053540229797 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TPM4 ENSG00000167460 CDS Human protein_coding chr19:16212142 chr19:16212141 synonymous SNV . 0 20 hm5C_associated_SNPs_40902 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:16212140-16212160
64251 chr3 124456805 124456805 1 + C A UCEC 124456785 + 124456765 124456805 41 GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCC GCACCCAAAGAACTCAGCTTCGGTGCACGTGCAGAGCTGCA < 41bp 1 0.372816513952122 1 0.712706387042999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UMPS ENSG00000114491 CDS Human protein_coding chr3:124456785 chr3:124456805 nonsynonymous SNV 0.977 4 41 hm5C_associated_SNPs_40903 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:124456779-124456835
64251 chr7 100485401 100485401 1 + T C UCEC 100485418 + 100485398 100485438 41 GTTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC GTTCTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC < 41bp 1 0.452017657468382 1 0.221474021673203 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485418 chr7:100485401 synonymous SNV . 0 4 hm5C_associated_SNPs_40904 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:100485341-100485401
64251 chr14 101327140 101327140 1 + G A UCEC 101327141 + 101327121 101327161 41 CGCCCTCTGACTGATGGACGCCGCTGACCTGGGGTCAGACC CGCCCTCTGACTGATGGACACCGCTGACCTGGGGTCAGACC < 41bp 1 0.347259464035934 1 0.0506080389022827 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MEG3 ENSG00000214548 ncRNA_exonic Human lincRNA chr14:101327141 chr14:101327140 . . 0 20 hm5C_associated_SNPs_40905 0 0 2 FUS POSTAR2 GSE43308,GSM1060382 chr14:101327120-101327140
64251 chrX 73043553 73043553 1 - T C UCEC 73043534 - 73043514 73043554 41 GAAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAAT GGAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAAT < 41bp 1 0.117141441792782 1 0.124025285243988 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043534 chrX:73043553 . . 0 2 hm5C_associated_SNPs_40906 0 0 61 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr16 57485042 57485042 1 + C T UCEC 57485048 + 57485028 57485068 41 GAAGCAGCAGCCTCCCAACTCATTTTCTCAGCAGCATTCTG GAAGCAGCAGCCTCTCAACTCATTTTCTCAGCAGCATTCTG < 41bp 1 0.122779297972581 1 0.039093941450119 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COQ9 ENSG00000088682 CDS Human protein_coding chr16:57485048 chr16:57485042 nonsynonymous SNV 0.022 1 15 hm5C_associated_SNPs_40907 0 0 2 DDX3X POSTAR2 ENCODE chr16:57484950-57485053
64251 chr3 184062624 184062624 1 + G A UCEC 184062638 + 184062618 184062658 41 GAGCCAGCCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC GAGCCAACCCCCTGCAAGGACTGCCAGCCACTCTGCCCACC < 41bp 1 0.46408842354658 1 0.0830295085906982 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAM131A ENSG00000175182 CDS Human protein_coding chr3:184062638 chr3:184062624 nonsynonymous SNV 0.840 0 7 hm5C_associated_SNPs_40908 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:184062593-184062631
64251 chr1 57157081 57157081 1 + G A UCEC 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGTGATCAACACTCCAACAGATTTTTTTAT < 41bp 1 0.0522560201026635 1 0.164559036493301 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157081 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_40909 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:57157066-57157093
64251 chr11 69456142 69456142 1 + A G UCEC 69456153 + 69456133 69456173 41 CCCGATGCCAACCTCCTCAACGACCGGGTGCTGCGGGCCAT CCCGATGCCGACCTCCTCAACGACCGGGTGCTGCGGGCCAT < 41bp 1 0.590969020637776 1 0.0860893726348877 experiment 0.818061958724449 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCND1 ENSG00000110092 CDS Human protein_coding chr11:69456153 chr11:69456142 nonsynonymous SNV 0.997 1 10 hm5C_associated_SNPs_40911 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:69456125-69456163
64251 chr3 43389389 43389389 1 + T C UCEC 43389379 + 43389359 43389399 41 CAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAA CAGCTGCAGTAGTTCGGAGACCAGTGATGACGATTCTGAAA < 41bp 1 0.391500412862882 1 0.251638770103455 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRK ENSG00000163788 CDS Human protein_coding chr3:43389379 chr3:43389389 synonymous SNV . 0 31 hm5C_associated_SNPs_40912 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:43389366-43389390
64251 chr21 47983782 47983782 1 + C T UCEC 47983797 + 47983777 47983817 41 CCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG CCCGGTGTGAAGGTCATCATCGCACACACCGAGACCAAAGG < 41bp 1 0.337541345495261 1 0.36799681186676 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47983797 chr21:47983782 synonymous SNV . 0 6 hm5C_associated_SNPs_40918 0 0 4 BUD13 POSTAR2 ENCODE chr21:47983769-47983809
64251 chr19 36579985 36579985 1 + T C UCEC 36579965 + 36579945 36579985 41 AGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCAT AGAGACATCCAGATGATCAGCTGTGGGGCTGACAAGAGCAC < 41bp 1 0.287012993918609 1 0.176028609275818 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36579965 chr19:36579985 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_40919 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr19:36579955-36579985
64251 chr7 106826886 106826886 1 + G A UCEC 106826904 + 106826884 106826924 41 TGGCCTTCAACTGTCTGGCACTGTTTTTTGAAAGGTAAAAC TGACCTTCAACTGTCTGGCACTGTTTTTTGAAAGGTAAAAC < 41bp 1 0.0991838023245306 1 0.0271297991275787 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HBP1 ENSG00000105856 CDS Human protein_coding chr7:106826904 chr7:106826886 stopgain 0.999 1 3 hm5C_associated_SNPs_40920 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:106826865-106826903
64251 chr11 71941191 71941191 1 + C T UCEC 71941211 + 71941191 71941231 41 CCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCG TCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCG < 41bp 1 0.465026798012366 1 0.43515083193779 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71941211 chr11:71941191 synonymous SNV . 0 1 hm5C_associated_SNPs_40921 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:71941173-71941211
64251 chr19 19627039 19627039 1 + A G UCEC 19627040 + 19627020 19627060 41 GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA GGGACCGGAAGTGTGGGATGCTGCGAGTATGGCGGCGTCAA < 41bp 1 0.647509977015478 1 0.492052584886551 experiment 0.704980045969044 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19627040 chr19:19627039 nonsynonymous SNV . 0 20 hm5C_associated_SNPs_40922 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr15 69728968 69728968 1 + A T UCEC 69728948 + 69728928 69728968 41 GCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGATA GCAGAGTTTTCCACCTTTGCCATCATGCGAAATTTTGGATT < 41bp 1 0.5660954831079 1 0.08512082695961 experiment 0.867809033784199 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69728948 chr15:69728968 nonsynonymous SNV 0.991 0 41 hm5C_associated_SNPs_40923 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003588 chr15:69728950-69728971
64251 chr11 598393 598393 1 + G C UCEC 598413 + 598393 598433 41 GTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG CTCTTCCCTGCTGGATGAAGCCATCGAGGCTGTGGCGACTG < 41bp 1 0.11384407948472 1 0.312545567750931 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:598413 chr11:598393 synonymous SNV . 0 1 hm5C_associated_SNPs_40924 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:598374-598412
64251 chr17 78335565 78335565 1 + G A UCEC 78335559 + 78335539 78335579 41 CCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG CCCAAGAAGTTCGTGGACATCTTTCAACAGACTCCTCTGGG < 41bp 1 0.0312183614513241 1 0.0685569643974304 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78335559 chr17:78335565 synonymous SNV . 0 27 hm5C_associated_SNPs_40925 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr17:78335554-78335577
64251 chr2 74326595 74326595 1 + G A UCEC 74326589 + 74326569 74326609 41 TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC TCCCCCGCGAGGTCCGACGCCTGCCCAAGCCTGCCAAGTCC < 41bp 1 0.285078244465106 1 0.090480238199234 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74326589 chr2:74326595 nonsynonymous SNV 0.994 3 27 hm5C_associated_SNPs_40926 0 0 1 BUD13 POSTAR2 ENCODE chr2:74326575-74326602
64251 chr3 50311359 50311359 1 + C T UCEC 50311344 + 50311324 50311364 41 GCCCTGGTCTTCGCCTCCAGCAGCATCTTCCAGGGCTCTGC GCCCTGGTCTTCGCCTCCAGCAGCATCTTCCAGGGTTCTGC < 41bp 1 0.592196590736683 1 0.43670067191124 experiment 0.815606818526635 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEMA3B ENSG00000012171 ncRNA_exonic Human protein_coding chr3:50311344 chr3:50311359 . . 0 36 hm5C_associated_SNPs_40927 0 0 3 PPIG POSTAR2 ENCODE chr3:50311350-50311403
64251 chr17 75398198 75398198 1 + G A UCEC 75398205 + 75398185 75398225 41 TCCACCCCACCCCGGAGGGTCCAGACTCCCCTACTCCGAGC TCCACCCCACCCCAGAGGGTCCAGACTCCCCTACTCCGAGC < 41bp 1 0.31189833990089 1 0.157963871955872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEPT9 ENSG00000184640 CDS Human protein_coding chr17:75398205 chr17:75398198 nonsynonymous SNV 0.997 3 14 hm5C_associated_SNPs_40928 1 0 2 METAP2 POSTAR2 ENCODE chr17:75398189-75398328
64251 chr10 3176690 3176690 1 + C G UCEC 3176685 + 3176665 3176705 41 CCACCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACT CCACCAACAGGGTGGGGCACCCTCTGCATTTGATAGAAACT < 41bp 1 0.0159512478006787 1 0.0795022547245026 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176685 chr10:3176690 nonsynonymous SNV 0.254 3 26 hm5C_associated_SNPs_40929 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr10 3176690 3176690 1 + C G UCEC 3176688 + 3176668 3176708 41 CCAACAGGGTGGGGCACCCTCTCCATTTGATAGAAACTTTG CCAACAGGGTGGGGCACCCTCTGCATTTGATAGAAACTTTG < 41bp 1 0.744040310943463 1 0.801944136619568 experiment 0.511919378113075 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PFKP ENSG00000067057 CDS Human protein_coding chr10:3176688 chr10:3176690 nonsynonymous SNV 0.254 3 23 hm5C_associated_SNPs_40930 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3176672-3176702
64251 chr17 47115720 47115720 1 + C A UCEC 47115716 + 47115696 47115736 41 AAGCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCC AAGCAGCAGCAAGTGGACATCCCCATTCGGCTCCTGGTGCC < 41bp 1 0.673855791094853 1 0.406268835067749 experiment 0.652288417810295 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115716 chr17:47115720 nonsynonymous SNV 0.942 2 25 hm5C_associated_SNPs_40931 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr17 47115720 47115720 1 + C A UCEC 47115718 + 47115698 47115738 41 GCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCCCA GCAGCAGCAAGTGGACATCCCCATTCGGCTCCTGGTGCCCA < 41bp 1 0.053551689908408 1 0.0480248630046844 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115718 chr17:47115720 nonsynonymous SNV 0.942 2 23 hm5C_associated_SNPs_40932 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr12 132546836 132546836 1 + C T UCEC 132546853 + 132546833 132546873 41 CCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGGTAAA CCCTGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGGTAAA < 41bp 1 0.124308090276092 1 0.138336807489395 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546853 chr12:132546836 nonsynonymous SNV 0.171 5 4 hm5C_associated_SNPs_40933 0 0 4 DDX24 POSTAR2 ENCODE chr12:132546832-132546867
64251 chr15 29346574 29346574 1 + G A UCEC 29346590 + 29346570 29346610 41 AGACGGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC AGACAGCCAACTGCCCATTCCGGAGGATGAGCCCTCCGTCC < 41bp 1 0.747422214473333 1 0.894145429134369 experiment 0.505155571053333 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346590 chr15:29346574 nonsynonymous SNV 0.092 0 5 hm5C_associated_SNPs_40934 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29346560-29346598
64251 chr1 76255030 76255030 1 + A G UCEC 76255012 + 76254992 76255032 41 CTAGTATCGGACATGATCCTCATCTTTTATACACTCTTAGT CTAGTATCGGACATGATCCTCATCTTTTATACACTCTTGGT < 41bp 1 0.259685373036812 1 0.0464441478252411 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255012 chr1:76255030 nonsynonymous SNV 0.991 4 39 hm5C_associated_SNPs_40935 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:76254955-76255066
64251 chr17 4799510 4799510 1 + G A UCEC 4799505 + 4799485 4799525 41 CAGTCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGA CAGTCCTTTGCCGACCTCCCCCACCACCCTCTGCTGGTCGA < 41bp 1 0.0767008920226729 1 0.142163008451462 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799505 chr17:4799510 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_40936 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4799510-4799541
64251 chr17 4799510 4799510 1 + G A UCEC 4799508 + 4799488 4799528 41 TCCTTTGCCGACCTCCCCCACCGCCCTCTGCTGGTCGACCT TCCTTTGCCGACCTCCCCCACCACCCTCTGCTGGTCGACCT < 41bp 1 0.0931018111385845 1 0.218882948160172 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799508 chr17:4799510 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_40937 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4799510-4799541
64251 chr6 64394367 64394367 1 + G A UCEC 64394368 + 64394348 64394388 41 ATCCGGGAGAAATAGATGTGCCATCTCATGAATTAAATTGT ATCCGGGAGAAATAGATGTACCATCTCATGAATTAAATTGT < 41bp 1 0.0176841412579966 1 0.075787752866745 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64394368 chr6:64394367 synonymous SNV . 0 20 hm5C_associated_SNPs_40938 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64394088-64394691
64251 chr20 39986973 39986973 1 + C A UCEC 39986960 + 39986940 39986980 41 GTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGA GTTTCTGCCCCACGGACAGCCCTTCTATGCTGCATTTGGGA < 41bp 1 0.0107287804019931 1 0.111655384302139 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39986960 chr20:39986973 synonymous SNV . 0 34 hm5C_associated_SNPs_40940 0 0 4 GRWD1 POSTAR2 ENCODE chr20:39986947-39986986
64251 chr2 27663370 27663370 1 + G C UCEC 27663350 + 27663330 27663370 41 TGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAG TGGCTGAAATCCCTGCAGGACCAGGAAGAGAACCAGTTCAC < 41bp 1 0.32506387047183 1 0.530017018318176 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27663350 chr2:27663370 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_40941 0 0 4 DDX55 POSTAR2 ENCODE chr2:27663323-27663372
64251 chr17 64685104 64685104 1 + A G UCEC 64685113 + 64685093 64685133 41 AGGTGAGTACTACAACGTACCCATTCCGGAAGGGGACGAGG AGGTGAGTACTGCAACGTACCCATTCCGGAAGGGGACGAGG < 41bp 1 0.0273591832049799 1 0.0530323684215546 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64685113 chr17:64685104 nonsynonymous SNV 0.993 4 12 hm5C_associated_SNPs_40942 0 0 7 GRWD1 POSTAR2 ENCODE chr17:64685087-64685186
64251 chr4 57876573 57876573 1 + G A UCEC 57876563 + 57876543 57876583 41 CTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCT CTTTTGCGTCTACTCTTTCTCACCTGCGTCATTTAAATTCT < 41bp 1 0.641953362140799 1 0.421427458524704 experiment 0.716093275718401 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57876563 chr4:57876573 nonsynonymous SNV 0.999 5 31 hm5C_associated_SNPs_40943 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:57876532-57876584
64251 chr7 45662260 45662260 1 + C T UCEC 45662274 + 45662254 45662294 41 GTTTCACGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG GTTTCATGGGCTTGGCATCCCAGTGCACAGCCCAGGAGCTG < 41bp 1 0.392534021827298 1 0.637467384338379 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ADCY1 ENSG00000164742 CDS Human protein_coding chr7:45662274 chr7:45662260 nonsynonymous SNV 0.985 5 7 hm5C_associated_SNPs_40944 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:45662233-45662265
64251 chr5 154244900 154244900 1 + C T UCEC 154244920 + 154244900 154244940 41 CTTCTGGAATCAATACTTGGCAGTTCAATTTCAAATTTAAC TTTCTGGAATCAATACTTGGCAGTTCAATTTCAAATTTAAC < 41bp 1 0.0518227332777401 1 0.0715358853340149 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNOT8 ENSG00000155508 CDS Human protein_coding chr5:154244920 chr5:154244900 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_40945 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:154244886-154244909
64251 chr17 38290576 38290576 1 + T C UCEC 38290560 + 38290540 38290580 41 AGCTACCCTGGTTGGATGAGCGTAGCCGATGCAGATTGGAG AGCTACCCTGGTTGGATGAGCGTAGCCGATGCAGATCGGAG < 41bp 1 0.203137775788226 1 0.180713981389999 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MSL1 ENSG00000188895 CDS Human protein_coding chr17:38290560 chr17:38290576 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_40946 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr17:38290532-38290577
64251 chr17 38290576 38290576 1 + T C UCEC 38290565 + 38290545 38290585 41 CCCTGGTTGGATGAGCGTAGCCGATGCAGATTGGAGATCCA CCCTGGTTGGATGAGCGTAGCCGATGCAGATCGGAGATCCA < 41bp 1 0.222555720496747 1 0.0895835757255554 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MSL1 ENSG00000188895 CDS Human protein_coding chr17:38290565 chr17:38290576 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_40947 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr17:38290532-38290577
64251 chr11 65978624 65978624 1 + G A UCEC 65978630 + 65978610 65978650 41 TCATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGC TCATTTCCTTAAGCAAGATGCCAACAAGCTGCAGATCATGC < 41bp 1 0.0112065017071527 1 0.0732742547988892 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978630 chr11:65978624 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_40948 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978624 65978624 1 + G A UCEC 65978631 + 65978611 65978651 41 CATTTCCTTAAGCGAGATGCCAACAAGCTGCAGATCATGCT CATTTCCTTAAGCAAGATGCCAACAAGCTGCAGATCATGCT < 41bp 1 0.2529415588499 1 0.289121091365814 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978631 chr11:65978624 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_40949 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr11 65978624 65978624 1 + G A UCEC 65978638 + 65978618 65978658 41 TTAAGCGAGATGCCAACAAGCTGCAGATCATGCTGCAAAGG TTAAGCAAGATGCCAACAAGCTGCAGATCATGCTGCAAAGG < 41bp 1 0.638659743118731 1 0.277484893798828 experiment 0.722680513762538 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PACS1 ENSG00000175115 CDS Human protein_coding chr11:65978638 chr11:65978624 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_40950 0 0 1 YBX3 POSTAR2 ENCODE chr11:65978605-65978661
64251 chr19 50919746 50919746 1 + C T UCEC 50919728 + 50919708 50919748 41 AGCAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCC AGCAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGTCC < 41bp 1 0.390754141501583 1 0.292333483695984 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919728 chr19:50919746 nonsynonymous SNV 0.999 4 39 hm5C_associated_SNPs_40952 0 0 3 FXR2 POSTAR2 ENCODE chr19:50919690-50919746
64251 chr19 50919746 50919746 1 + C T UCEC 50919730 + 50919710 50919750 41 CAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCCAT CAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGTCCAT < 41bp 1 0.0724050712414814 1 0.0842882692813873 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919730 chr19:50919746 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_40953 0 0 3 FXR2 POSTAR2 ENCODE chr19:50919690-50919746
64251 chr19 50919746 50919746 1 + C T UCEC 50919731 + 50919711 50919751 41 AGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCCATC AGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGTCCATC < 41bp 1 0.339522493736435 1 0.0838181674480438 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919731 chr19:50919746 nonsynonymous SNV 0.999 4 36 hm5C_associated_SNPs_40954 0 0 3 FXR2 POSTAR2 ENCODE chr19:50919690-50919746
64251 chr13 53036622 53036622 1 + A C UCEC 53036640 + 53036620 53036660 41 CCATGGCAGAAGAAGATGAACAAAGATTATTTACTGAAAAA CCCTGGCAGAAGAAGATGAACAAAGATTATTTACTGAAAAA < 41bp 1 0.492137552741761 1 0.429655075073242 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53036640 chr13:53036622 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_40955 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr13:53036499-53036630
64251 chr17 7479907 7479907 1 + C T UCEC 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGTACCAA < 41bp 1 0.625625062221003 1 0.0837382972240448 experiment 0.748749875557995 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479907 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_40957 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479907 7479907 1 + C T UCEC 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGTACCAACGT < 41bp 1 0.558302168267172 1 0.486173629760742 experiment 0.883395663465657 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479907 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_40958 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479907 7479907 1 + C T UCEC 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATCGGGGGTACCAACGTGCGTGCTGAGGTGC < 41bp 1 0.121862389296438 1 0.169220685958862 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479907 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_40959 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479907 7479907 1 + C T UCEC 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATCGGGGGTACCAACGTGCGTGCTGAGGTGCA < 41bp 1 0.544650959688061 1 0.355463087558746 experiment 0.910698080623877 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479907 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_40960 0 0 42 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chrX 47104880 47104880 1 + T C UCEC 47104877 + 47104857 47104897 41 AGACCCTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCG AGACCCTGGAGAAGGAAAACCCCCGGTGAGGGGCCAGAGCG < 41bp 1 0.516579225436385 1 0.367551743984222 experiment 0.96684154912723 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47104877 chrX:47104880 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_40961 0 0 2 FXR2 POSTAR2 ENCODE chrX:47104800-47104884
64251 chr2 202141611 202141611 1 + A G UCEC 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAGTCA < 41bp 1 0.264841833405595 1 0.128590166568756 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141611 nonsynonymous SNV 0.748 4 38 hm5C_associated_SNPs_40964 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:202141587-202141622
64251 chr15 69729046 69729046 1 + G A UCEC 69729054 + 69729034 69729074 41 ATGATGATTGATGAGTTTAACAAACAATGTAAGGGCAAAAC ATGATGATTGATAAGTTTAACAAACAATGTAAGGGCAAAAC < 41bp 1 0.163654574061368 1 0.297039926052094 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69729054 chr15:69729046 nonsynonymous SNV 0.333 1 13 hm5C_associated_SNPs_40965 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:69729001-69729051
64251 chr11 61491044 61491044 1 + G T UCEC 61491024 + 61491004 61491044 41 ACCAAGAGGAGGCAGCGTAACCTGCGGACCTACAACCTGCG ACCAAGAGGAGGCAGCGTAACCTGCGGACCTACAACCTGCT < 41bp 1 0.0880304383490829 1 0.0913488566875458 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61491024 chr11:61491044 nonsynonymous SNV 0.998 3 41 hm5C_associated_SNPs_40966 0 0 1 PRPF8 POSTAR2 ENCODE chr11:61491034-61491083
64251 chr14 64990104 64990104 1 + C T UCEC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGAGCGTCAGTTGCGACTGCACAATGATATGTACAAAGGC < 41bp 1 0.648806478332533 1 0.498590469360352 experiment 0.702387043334935 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990104 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_40968 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:64990104-64990105
64251 chr19 52714672 52714672 1 + C T UCEC 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG TGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.441976855451623 1 0.0572250485420227 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714672 nonsynonymous SNV 0.992 4 1 hm5C_associated_SNPs_40971 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr19 17615412 17615412 1 + C T UCEC 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTTGCCCT < 41bp 1 0.269466190214671 1 0.17797514796257 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615412 synonymous SNV . 0 36 hm5C_associated_SNPs_40972 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr9 88576932 88576932 1 + C T UCEC 88576946 + 88576926 88576966 41 AGATAACGTGGTTAGAAGGCCATTCACTGGCACAGACAGTA AGATAATGTGGTTAGAAGGCCATTCACTGGCACAGACAGTA < 41bp 1 0.0175860962049627 1 0.0999580323696136 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NAA35 ENSG00000135040 CDS Human protein_coding chr9:88576946 chr9:88576932 nonsynonymous SNV 0.995 4 7 hm5C_associated_SNPs_40973 0 0 1 U2AF2 POSTAR2 ENCODE chr9:88576918-88576972
64251 chr9 88576932 88576932 1 + C T UCEC 88576950 + 88576930 88576970 41 AACGTGGTTAGAAGGCCATTCACTGGCACAGACAGTATTTA AATGTGGTTAGAAGGCCATTCACTGGCACAGACAGTATTTA < 41bp 1 0.264760879310564 1 0.172812670469284 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NAA35 ENSG00000135040 CDS Human protein_coding chr9:88576950 chr9:88576932 nonsynonymous SNV 0.995 4 3 hm5C_associated_SNPs_40974 0 0 1 U2AF2 POSTAR2 ENCODE chr9:88576918-88576972
64251 chr1 145115808 145115808 1 + G A UCEC 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAAGTACTTGAACATACATTCCACTTATGCCAAACTT < 41bp 1 0.047236645854804 1 0.0589816570281982 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115808 . . 0 20 hm5C_associated_SNPs_40977 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:145115800-145115821
64251 chr5 139917040 139917040 1 + C A UCEC 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACATCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC < 41bp 1 0.317971365811865 1 0.449128776788712 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917040 nonsynonymous SNV 0.996 4 6 hm5C_associated_SNPs_40978 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:139917021-139917046
64251 chr9 37424938 37424938 1 + C T UCEC 37424932 + 37424912 37424952 41 GCCCACGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAA GCCCACGGCCTGCTCTGCCTCCTCTCTGACCACGTGGACAA < 41bp 1 0.235685464226441 1 0.0622031986713409 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424932 chr9:37424938 synonymous SNV . 0 27 hm5C_associated_SNPs_40980 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr9 37424938 37424938 1 + C T UCEC 37424937 + 37424917 37424957 41 CGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAGGA CGGCCTGCTCTGCCTCCTCTCTGACCACGTGGACAAGAGGA < 41bp 1 0.377820845424434 1 0.525250196456909 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424937 chr9:37424938 synonymous SNV . 0 22 hm5C_associated_SNPs_40981 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr10 75529404 75529404 1 + G T UCEC 75529387 + 75529367 75529407 41 ATCCAGCATATCGGGGAGTCCTGAATAGCCCTGTGAAGGCT ATCCAGCATATCGGGGAGTCCTGAATAGCCCTGTGAATGCT < 41bp 1 0.75524662825815 1 0.78931999206543 experiment 0.4895067434837 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529387 chr10:75529404 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_40982 0 0 4 HNRNPD POSTAR2 GSE52971,GSM1279664 chr10:75529393-75529434
64251 chr1 24022839 24022839 1 + T C UCEC 24022845 + 24022825 24022865 41 CTCTTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAAT CTCTTTCAGTATGACGGGATCATCCTTCCTGGCAAATAAAT < 41bp 1 0.078145341099461 1 0.0429891049861908 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022845 chr1:24022839 synonymous SNV . 0 15 hm5C_associated_SNPs_40983 0 0 17 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:24022814-24022968
64251 chr1 24022839 24022839 1 + T C UCEC 24022848 + 24022828 24022868 41 TTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCC TTTCAGTATGACGGGATCATCCTTCCTGGCAAATAAATTCC < 41bp 1 0.0413553957399804 1 0.0572342276573181 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022848 chr1:24022839 synonymous SNV . 0 12 hm5C_associated_SNPs_40984 0 0 17 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:24022814-24022968
64251 chr12 95868078 95868078 1 + G A UCEC 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAAA < 41bp 1 0.350592447655141 1 0.492811590433121 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868078 synonymous SNV . 0 40 hm5C_associated_SNPs_40987 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr8 41355115 41355115 1 + G A UCEC 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCAAAGGTTGT < 41bp 1 0.129376881140519 1 0.173482447862625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355115 nonsynonymous SNV 0.904 4 33 hm5C_associated_SNPs_40988 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:41355093-41355115
64251 chr7 73927168 73927168 1 + G A UCEC 73927169 + 73927149 73927189 41 CCTTCCCACAGTGCTCAGCGCTGTCCAAACTGAACGCCGAG CCTTCCCACAGTGCTCAGCACTGTCCAAACTGAACGCCGAG < 41bp 1 0.101303229915148 1 0.350898563861847 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73927169 chr7:73927168 synonymous SNV . 0 20 hm5C_associated_SNPs_40989 0 0 2 PPIG POSTAR2 ENCODE chr7:73927157-73927212
64251 chr5 151183536 151183536 1 + C T UCEC 151183550 + 151183530 151183570 41 CGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG CGCCTTTGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG < 41bp 1 0.317282131970345 1 0.417029947042465 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151183550 chr5:151183536 nonsynonymous SNV 0.996 2 7 hm5C_associated_SNPs_40990 0 0 18 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:151183520-151183540
64251 chr2 216995665 216995665 1 + G A UCEC 216995648 + 216995628 216995668 41 TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCGGAG TCTCTAAAGTGGATGAGGAACAAATGAAATATAAATCAGAG < 41bp 1 0.366411535090591 1 0.505388557910919 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216995648 chr2:216995665 synonymous SNV . 0 38 hm5C_associated_SNPs_40991 0 0 40 FMR1 POSTAR2 GSE39682,GSM977615 chr2:216995615-216995690
64251 chr12 122620050 122620050 1 + G A UCEC 122620047 + 122620027 122620067 41 TCACTGCAGGCTCCTGGGGTCCCGGAGTTCCACAGCAGCAT TCACTGCAGGCTCCTGGGGTCCCAGAGTTCCACAGCAGCAT < 41bp 1 0.167279270594764 1 0.116553455591202 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122620047 chr12:122620050 synonymous SNV . 0 24 hm5C_associated_SNPs_40992 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:122620023-122620055
64251 chr9 135919203 135919203 1 + C T UCEC 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC CTCCGGCCTGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.0486790464876451 1 0.0339957773685455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919203 synonymous SNV . 0 9 hm5C_associated_SNPs_40993 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr7 148876574 148876574 1 + G A UCEC 148876555 + 148876535 148876575 41 AGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGG AGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCAG < 41bp 1 0.438632130924299 1 0.716839551925659 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876555 chr7:148876574 nonsynonymous SNV 0.946 3 40 hm5C_associated_SNPs_40994 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148876565-148876591
64251 chr6 36566715 36566715 1 + G A UCEC 36566703 + 36566683 36566723 41 AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCACCCTCGAG < 41bp 1 0.737512589290353 1 0.32223317027092 experiment 0.524974821419294 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566703 chr6:36566715 nonsynonymous SNV 0.996 4 33 hm5C_associated_SNPs_40995 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:36566620-36566740
64251 chr12 58001384 58001384 1 + C T UCEC 58001367 + 58001347 58001387 41 AGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCCGGT AGTACGGCACCATTGTCATCCAGTACGTCTTCCCGCCTGGT < 41bp 1 0.4483699760341 1 0.27837473154068 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001367 chr12:58001384 synonymous SNV . 0 38 hm5C_associated_SNPs_40996 0 0 1 GRWD1 POSTAR2 ENCODE chr12:58001354-58001396
64251 chr16 22337572 22337572 1 + C T UCEC 22337560 + 22337540 22337580 41 TCGGACCGCATGCTACAGGACACGGTGCTGGCCGCCGGTTG TCGGACCGCATGCTACAGGACACGGTGCTGGCTGCCGGTTG < 41bp 1 0.753912602231091 1 0.135055184364319 experiment 0.492174795537819 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337560 chr16:22337572 synonymous SNV . 0 33 hm5C_associated_SNPs_40999 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:22337555-22337578
64251 chr1 55524244 55524244 1 + G A UCEC 55524235 + 55524215 55524255 41 GCCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAG GCCTACACGGATGGCCACAGCCGTCGCCCACTGCGCCCCAG < 41bp 1 0.152363759325526 1 0.0812097489833832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524235 chr1:55524244 nonsynonymous SNV 0.001 0 30 hm5C_associated_SNPs_41006 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr1 55524244 55524244 1 + G A UCEC 55524236 + 55524216 55524256 41 CCTACACGGATGGCCACAGCCGTCGCCCGCTGCGCCCCAGA CCTACACGGATGGCCACAGCCGTCGCCCACTGCGCCCCAGA < 41bp 1 0.509750265532413 1 0.124994188547134 experiment 0.980499468935173 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524236 chr1:55524244 nonsynonymous SNV 0.001 0 29 hm5C_associated_SNPs_41007 0 0 3 FMR1 POSTAR2 ENCODE chr1:55524182-55524251
64251 chr7 101891773 101891773 1 + G A UCEC 101891755 + 101891735 101891775 41 GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGC GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCAGC < 41bp 1 0.615844917325688 1 0.705721795558929 experiment 0.768310165348624 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891755 chr7:101891773 synonymous SNV . 0 39 hm5C_associated_SNPs_41010 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891773 101891773 1 + G A UCEC 101891757 + 101891737 101891777 41 GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCC GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCAGCCC < 41bp 1 0.309233012061491 1 0.527885138988495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891757 chr7:101891773 synonymous SNV . 0 37 hm5C_associated_SNPs_41011 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891773 101891773 1 + G A UCEC 101891758 + 101891738 101891778 41 AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCCG AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCAGCCCG < 41bp 1 0.655865224866298 1 0.809045970439911 experiment 0.688269550267405 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891758 chr7:101891773 synonymous SNV . 0 36 hm5C_associated_SNPs_41012 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr15 69718689 69718689 1 + C T UCEC 69718677 + 69718657 69718697 41 ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGACGTATTGCT ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGATGTATTGCT < 41bp 1 0.541645161414894 1 0.531281352043152 experiment 0.916709677170211 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69718677 chr15:69718689 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_41013 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:69718665-69718690
64251 chr10 94392246 94392246 1 + C T UCEC 94392243 + 94392223 94392263 41 ACTTATTTTTAAAAATATAGCTGCTTAACACAGTTGAAGAA ACTTATTTTTAAAAATATAGCTGTTTAACACAGTTGAAGAA < 41bp 1 0.128783863189232 1 0.0622071325778961 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF11 ENSG00000138160 CDS Human protein_coding chr10:94392243 chr10:94392246 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_41016 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:94392240-94392260
64251 chr10 70962697 70962697 1 + A G UCEC 70962706 + 70962686 70962726 41 AAATTTTCTGCAGAGTTGATCCAGCATATTCCACTAAGTCT AAATTTTCTGCGGAGTTGATCCAGCATATTCCACTAAGTCT < 41bp 1 0.175906918191586 1 0.830444276332855 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70962706 chr10:70962697 synonymous SNV . 0 12 hm5C_associated_SNPs_41017 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr10:70962678-70962699
64251 chr3 191074905 191074905 1 + C T UCEC 191074906 + 191074886 191074926 41 ATTTTGCTGTCCTGGAGGACCACACCCTGGCTCACAGCCTG ATTTTGCTGTCCTGGAGGATCACACCCTGGCTCACAGCCTG < 41bp 1 0.521334976834512 1 0.208775401115417 experiment 0.957330046330977 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191074906 chr3:191074905 synonymous SNV . 0 20 hm5C_associated_SNPs_41018 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:191074889-191074914
64251 chr10 128768998 128768998 1 + G A UCEC 128768993 + 128768973 128769013 41 TAACTATGATGCCAGAGGAGCGGATGAACTTTCTTTACAGA TAACTATGATGCCAGAGGAGCGGATAAACTTTCTTTACAGA < 41bp 1 0.059291204150939 1 0.391879379749298 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128768993 chr10:128768998 nonsynonymous SNV 0.990 1 26 hm5C_associated_SNPs_41019 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:128768977-128769010
64251 chr6 37141801 37141801 1 + T A UCEC 37141808 + 37141788 37141828 41 CATGGATGCAAGATGTTCTCCTGCCCCAGGAAACTGCTGAG CATGGATGCAAGAAGTTCTCCTGCCCCAGGAAACTGCTGAG < 41bp 1 0.301668261190158 1 0.175362348556519 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PIM1 ENSG00000137193 CDS Human protein_coding chr6:37141808 chr6:37141801 nonsynonymous SNV 0.995 0 14 hm5C_associated_SNPs_41020 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:37141801-37141802
64251 chr3 126751399 126751399 1 + C T UCEC 126751389 + 126751369 126751409 41 CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA CTGGGCAAGGACTCACCCTCCAACAAGCTGTTCTACGCCAA < 41bp 1 0.414832974137046 1 0.639071822166443 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751389 chr3:126751399 nonsynonymous SNV 0.991 4 31 hm5C_associated_SNPs_41023 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:126751393-126751415
64251 chr17 27027980 27027980 1 + C T UCEC 27027991 + 27027971 27028011 41 CCAGCCCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG CCAGCCCAGTAGCCAGTGGCCACACCACTAATGACCCCTAG < 41bp 1 0.2311479955148 1 0.314044624567032 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27027991 chr17:27027980 stopgain 1.000 1 10 hm5C_associated_SNPs_41024 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:27027980-27028000
64251 chr13 76382253 76382253 1 + T C UCEC 76382234 + 76382214 76382254 41 GGAACTACCGTGCCTCCCATCAGTTTCACCCCTGGCCCCTG GGAACTACCGTGCCTCCCATCAGTTTCACCCCTGGCCCCCG < 41bp 1 0.266409299644234 1 0.776997566223145 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76382234 chr13:76382253 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_41025 0 0 1 SRSF9 POSTAR2 ENCODE chr13:76382237-76382355
64251 chr11 118277730 118277730 1 + C T UCEC 118277750 + 118277730 118277770 41 CTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTC TTGAGATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTC < 41bp 1 0.70773623435976 1 0.790025115013123 experiment 0.584527531280479 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277750 chr11:118277730 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_41026 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118277663-118277742
64251 chr20 30386283 30386283 1 + G A UCEC 30386297 + 30386277 30386317 41 AGCCCAGCAGTTGGAGGAGGCCAGACTACAGGAGGAAGAGC AGCCCAACAGTTGGAGGAGGCCAGACTACAGGAGGAAGAGC < 41bp 1 0.534590054011699 1 0.244136601686478 experiment 0.930819891976602 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TPX2 ENSG00000088325 CDS Human protein_coding chr20:30386297 chr20:30386283 synonymous SNV . 0 7 hm5C_associated_SNPs_41028 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:30386249-30386284
64251 chr14 97018849 97018849 1 + C T UCEC 97018858 + 97018838 97018878 41 TTGACAGCTCTCAATGACAGCAGCCTCGACTTGTCTATGGA TTGACAGCTCTTAATGACAGCAGCCTCGACTTGTCTATGGA < 41bp 1 0.216557825917313 1 0.205750554800034 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97018858 chr14:97018849 synonymous SNV . 0 12 hm5C_associated_SNPs_41029 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:97018822-97018849
64251 chr8 145727035 145727035 1 + A C UCEC 145727024 + 145727004 145727044 41 GCTGAGCCCCCTGGACAGCACCACCCCCCACACCCTGGTCC GCTGAGCCCCCTGGACAGCACCACCCCCCACCCCCTGGTCC < 41bp 1 0.125957181746568 1 0.0423557460308075 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145727024 chr8:145727035 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_41034 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145726993-145727046
64251 chr7 100204250 100204250 1 + C G UCEC 100204239 + 100204219 100204259 41 TCCGGAGAAAACAGAGGAATCTCCTTCAGCCCCTGGTGAGT TCCGGAGAAAACAGAGGAATCTCCTTCAGCCGCTGGTGAGT < 41bp 1 0.374959499474455 1 0.175954431295395 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100204239 chr7:100204250 nonsynonymous SNV 0.003 1 32 hm5C_associated_SNPs_41035 0 0 1 SND1 POSTAR2 ENCODE chr7:100204245-100204255
64251 chr1 32626302 32626302 1 + A G UCEC 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTGACGTGA < 41bp 1 0.176402896318392 1 0.460446953773499 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626302 synonymous SNV . 0 35 hm5C_associated_SNPs_41037 0 0 1 PRPF8 POSTAR2 ENCODE chr1:32626275-32626348
64251 chr11 86663311 86663311 1 - C A UCEC 86663294 - 86663274 86663314 41 CCAGGTGATGAAGAGGTGCCCTTACCTCACAAAACCCCCAT CCATGTGATGAAGAGGTGCCCTTACCTCACAAAACCCCCAT < 41bp 1 0.17526311624951 1 0.0546196103096008 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663294 chr11:86663311 nonsynonymous SNV 1.000 5 4 hm5C_associated_SNPs_41039 0 0 4 LIN28B POSTAR2 ENCODE chr11:86663252-86663331
64251 chr11 86663311 86663311 1 - C A UCEC 86663313 - 86663293 86663333 41 CCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTGCCCT CCACATGTGCATGGAAGGGCCATGTGATGAAGAGGTGCCCT < 41bp 1 0.3832432360387 1 0.296073138713837 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663313 chr11:86663311 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_41040 0 0 4 LIN28B POSTAR2 ENCODE chr11:86663252-86663331
64251 chr1 36645658 36645658 1 + G A UCEC 36645659 + 36645639 36645679 41 AAGCTGTGGTGCAGTCCCCGCAGGTCACAGGTAGATCTCCT AAGCTGTGGTGCAGTCCCCACAGGTCACAGGTAGATCTCCT < 41bp 1 0.396025377460257 1 0.918918251991272 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAP7D1 ENSG00000116871 CDS Human protein_coding chr1:36645659 chr1:36645658 synonymous SNV . 0 20 hm5C_associated_SNPs_41041 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:36645637-36645661
64251 chr11 67818112 67818112 1 + C T UCEC 67818104 + 67818084 67818124 41 GGTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGC GGTGATGGAGGGACTCTCAGCCTTCCTGTACGCCCTGCGGC < 41bp 1 0.0377455802313071 1 0.271637856960297 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818104 chr11:67818112 nonsynonymous SNV 0.994 5 29 hm5C_associated_SNPs_41042 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr11 67818112 67818112 1 + C T UCEC 67818105 + 67818085 67818125 41 GTGATGGAGGGACTCTCAGCCTTCCTGCACGCCCTGCGGCT GTGATGGAGGGACTCTCAGCCTTCCTGTACGCCCTGCGGCT < 41bp 1 0.132741351942865 1 0.450376033782959 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCIRG1 ENSG00000110719 CDS Human protein_coding chr11:67818105 chr11:67818112 nonsynonymous SNV 0.994 5 28 hm5C_associated_SNPs_41043 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67818088-67818123
64251 chr17 78321158 78321158 1 + G A UCEC 78321138 + 78321118 78321158 41 GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTG GCTTTGGACATCTTTCTGGCCAATTTGCCCGAGGCCAAGTA < 41bp 1 0.0358244259303817 1 0.0344139337539673 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78321138 chr17:78321158 nonsynonymous SNV 0.003 0 41 hm5C_associated_SNPs_41044 0 0 5 EIF3H POSTAR2 ENCODE chr17:78321130-78321181
64251 chr20 49458397 49458397 1 + G A UCEC 49458380 + 49458360 49458400 41 GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGCGGAG GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGCAGAG < 41bp 1 0.294565245555403 1 0.0512876510620117 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49458380 chr20:49458397 nonsynonymous SNV 0.444 0 38 hm5C_associated_SNPs_41046 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49458378-49458400
64251 chr4 103522093 103522093 1 + T C UCEC 103522101 + 103522081 103522121 41 ATTCTCAACTTGTGAGGGATCTACTAGAAGTCACATCTGGT ATTCTCAACTTGCGAGGGATCTACTAGAAGTCACATCTGGT < 41bp 1 0.158285475359354 1 0.453214138746262 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103522101 chr4:103522093 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_41047 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:103522092-103522126
64251 chr9 131247115 131247115 1 + G A UCEC 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGCGAGCCAAGAAGAGCGAGGAG < 41bp 1 0.434720959549174 1 0.504312098026276 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247115 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_41048 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:131247114-131247115
64251 chr19 30164870 30164870 1 + C T UCEC 30164884 + 30164864 30164904 41 GGCGTGCTGACCAAAGAGTGCCGCAAGAAGGCCAAGCCGCG GGCGTGTTGACCAAAGAGTGCCGCAAGAAGGCCAAGCCGCG < 41bp 1 0.282305066561735 1 0.0829402208328247 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLEKHF1 ENSG00000166289 CDS Human protein_coding chr19:30164884 chr19:30164870 synonymous SNV . 0 7 hm5C_associated_SNPs_41049 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:30164869-30164870
64251 chr7 35943879 35943879 1 + C T UCEC 35943897 + 35943877 35943917 41 AACAAGAAGAAAGGGAAGATCTTTTAAACTCTCTATTGACC AATAAGAAGAAAGGGAAGATCTTTTAAACTCTCTATTGACC < 41bp 1 0.0632579530425052 1 0.09201979637146 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35943897 chr7:35943879 synonymous SNV . 0 3 hm5C_associated_SNPs_41051 0 0 3 UCHL5 POSTAR2 ENCODE chr7:35943863-35943897
64251 chr1 24018319 24018319 1 + G A UCEC 24018301 + 24018281 24018321 41 CGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGT CGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCAGT < 41bp 1 0.292134094221214 1 0.245328694581985 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24018301 chr1:24018319 synonymous SNV . 0 39 hm5C_associated_SNPs_41053 0 0 15 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr1 24018319 24018319 1 + G A UCEC 24018302 + 24018282 24018322 41 GGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGTG GGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCAGTG < 41bp 1 0.44433471684596 1 0.0862075388431549 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24018302 chr1:24018319 synonymous SNV . 0 38 hm5C_associated_SNPs_41054 0 0 15 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:24018291-24018319
64251 chr11 65273147 65273147 1 + C A UCEC 65273153 + 65273133 65273173 41 GGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAACTATGT GGTAACGATGGTGTAGAGGTCTTTGGTGGGTTGAACTATGT < 41bp 1 0.479328487976688 1 0.172385007143021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65273153 chr11:65273147 . . 0 15 hm5C_associated_SNPs_41055 0 0 114 PTBP1 POSTAR2 GSE19323,GSM480477 chr11:65273080-65273160
64251 chr9 133760723 133760723 1 + C T UCEC 133760722 + 133760702 133760742 41 CGAGTGTCTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGAT CGAGTGTCTCTTCGGAAAACCTGCCAGCCTCCAGAGCGGAT < 41bp 1 0.159085689170215 1 0.130102872848511 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760722 chr9:133760723 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_41056 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr9 133760723 133760723 1 + C T UCEC 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTCGGAAAACCTGCCAGCCTCCAGAGCGGATCGCCAGC < 41bp 1 0.0125618375904117 1 0.124967217445374 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760723 nonsynonymous SNV 0.990 4 15 hm5C_associated_SNPs_41057 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr6 33652660 33652660 1 + C T UCEC 33652675 + 33652655 33652695 41 AAGATCTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCT AAGATTTTCCAGGAGAGCATCGGCCTGGCCATCCACCTGCT < 41bp 1 0.226500244442919 1 0.331081449985504 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652675 chr6:33652660 synonymous SNV . 0 6 hm5C_associated_SNPs_41058 0 0 2 GRWD1 POSTAR2 ENCODE chr6:33652645-33652702
64251 chr13 98654815 98654815 1 + A C UCEC 98654834 + 98654814 98654854 41 TAAATTTTGTTTTACTTTTTCTCCAGGATCCTGTAAGTACC TCAATTTTGTTTTACTTTTTCTCCAGGATCCTGTAAGTACC < 41bp 1 0.637039837715714 1 0.916033506393433 experiment 0.725920324568571 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO5 ENSG00000065150 CDS Human protein_coding chr13:98654834 chr13:98654815 synonymous SNV . 0 2 hm5C_associated_SNPs_41059 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:98654770-98654815
64251 chr9 35733129 35733129 1 + C T UCEC 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTTTAT < 41bp 1 0.111482682458674 1 0.0815618336200714 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733129 nonsynonymous SNV 0.028 1 38 hm5C_associated_SNPs_41061 0 0 2 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733129 35733129 1 + C T UCEC 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTTTATG < 41bp 1 0.12715172408499 1 0.206052452325821 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733129 nonsynonymous SNV 0.028 1 37 hm5C_associated_SNPs_41062 0 0 2 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 19336755 19336755 1 + G A UCEC 19336770 + 19336750 19336790 41 ATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGAT ATGATACTAACAATGGGGAGCACACAGTCTTCGTCAGAGAT < 41bp 1 0.0440099699237594 1 0.255750805139542 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336770 chr9:19336755 nonsynonymous SNV 1.000 0 6 hm5C_associated_SNPs_41063 0 0 1 QKI POSTAR2 ENCODE chr9:19336751-19336813
64251 chr11 67052434 67052434 1 + C T UCEC 67052439 + 67052419 67052459 41 AACCGCCTCGAGTGGCGGGGCGAGGGCGAGGCCCCGGTAAG AACCGCCTCGAGTGGTGGGGCGAGGGCGAGGCCCCGGTAAG < 41bp 1 0.690321353112961 1 0.921181797981262 experiment 0.619357293774078 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052439 chr11:67052434 nonsynonymous SNV 0.983 3 16 hm5C_associated_SNPs_41064 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052434 67052434 1 + C T UCEC 67052450 + 67052430 67052470 41 GTGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG GTGGTGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCG < 41bp 1 0.47609194344022 1 0.745021760463715 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052450 chr11:67052434 nonsynonymous SNV 0.983 3 5 hm5C_associated_SNPs_41065 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052434 67052434 1 + C T UCEC 67052451 + 67052431 67052471 41 TGGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG TGGTGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGG < 41bp 1 0.697894721606864 1 0.803953945636749 experiment 0.604210556786272 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052451 chr11:67052434 nonsynonymous SNV 0.983 3 4 hm5C_associated_SNPs_41066 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052434 67052434 1 + C T UCEC 67052452 + 67052432 67052472 41 GGCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG GGTGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGG < 41bp 1 0.52414211347276 1 0.705273568630219 experiment 0.95171577305448 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052452 chr11:67052434 nonsynonymous SNV 0.983 3 3 hm5C_associated_SNPs_41067 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr11 67052434 67052434 1 + C T UCEC 67052453 + 67052433 67052473 41 GCGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG GTGGGGCGAGGGCGAGGCCCCGGTAAGGAGCCCGTGCGGGG < 41bp 1 0.745068371721973 1 0.631834149360657 experiment 0.509863256556055 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052453 chr11:67052434 nonsynonymous SNV 0.983 3 2 hm5C_associated_SNPs_41068 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr6 145157474 145157474 1 + C T UCEC 145157491 + 145157471 145157511 41 CAGCACCTCCGAAGGGGGCTCCCTGTCGGTTCACCGCCAGA CAGTACCTCCGAAGGGGGCTCCCTGTCGGTTCACCGCCAGA < 41bp 1 0.0574186853256481 1 0.259549677371979 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:145157491 chr6:145157474 nonsynonymous SNV 0.995 2 4 hm5C_associated_SNPs_41069 0 0 1 AGGF1 POSTAR2 ENCODE chr6:145157456-145157474
64251 chr7 99627517 99627517 1 + A G UCEC 99627498 + 99627478 99627518 41 CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCAT CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCGT < 41bp 1 0.516162144838957 1 0.140241891145706 experiment 0.967675710322087 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627498 chr7:99627517 nonsynonymous SNV 0.524 0 40 hm5C_associated_SNPs_41072 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:99627501-99627532
64251 chr12 1890204 1890204 1 + A G UCEC 1890217 + 1890197 1890237 41 CAGTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAG CAGTGGGGCATGTTTGCCACCCCTCAGTATCGGGGAGTAAG < 41bp 1 0.0557974416581432 1 0.0311235189437866 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890217 chr12:1890204 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_41073 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:1890182-1890208
64251 chr12 1890204 1890204 1 + A G UCEC 1890218 + 1890198 1890238 41 AGTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGA AGTGGGGCATGTTTGCCACCCCTCAGTATCGGGGAGTAAGA < 41bp 1 0.285637292452992 1 0.05394446849823 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890218 chr12:1890204 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_41074 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:1890182-1890208
64251 chr12 1890204 1890204 1 + A G UCEC 1890219 + 1890199 1890239 41 GTGGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAG GTGGGGCATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAG < 41bp 1 0.542094522998959 1 0.425941437482834 experiment 0.915810954002082 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890219 chr12:1890204 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_41075 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:1890182-1890208
64251 chr12 1890204 1890204 1 + A G UCEC 1890221 + 1890201 1890241 41 GGGACATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAGCA GGGGCATGTTTGCCACCCCTCAGTATCGGGGAGTAAGAGCA < 41bp 1 0.650314924560179 1 0.836331725120544 experiment 0.699370150879642 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1890221 chr12:1890204 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_41076 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:1890182-1890208
64251 chr2 27455425 27455425 1 + C A UCEC 27455445 + 27455425 27455465 41 CTAACGTATTGGGGCACCACCCATGACCTCACCTTTCGAAC ATAACGTATTGGGGCACCACCCATGACCTCACCTTTCGAAC < 41bp 1 0.0654087008931432 1 0.114235013723373 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27455445 chr2:27455425 nonsynonymous SNV 0.975 3 1 hm5C_associated_SNPs_41077 0 0 6 EWSR1 POSTAR2 SRX029343 chr2:27455409-27455430
64251 chr15 91456109 91456109 1 + C A UCEC 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCATACGTCCCCAAGGAGCCCCCCGTGCTGCG < 41bp 1 0.612621207835874 1 0.866792440414429 experiment 0.774757584328252 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456109 synonymous SNV . 0 12 hm5C_associated_SNPs_41078 0 0 3 DDX24 POSTAR2 ENCODE chr15:91456106-91456132
64251 chr17 29855735 29855735 1 + G A UCEC 29855723 + 29855703 29855743 41 AGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCGAGTTCA AGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGACGAGTTCA < 41bp 1 0.116728930779565 1 0.207984775304794 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RAB11FIP4 ENSG00000131242 CDS Human protein_coding chr17:29855723 chr17:29855735 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_41079 0 0 1 EIF3H POSTAR2 ENCODE chr17:29855637-29855789
64251 chr11 57428901 57428901 1 + T C UCEC 57428893 + 57428873 57428913 41 CTCATCATGGATATCCGGTTCATGGATCTGAAGTAGAGATC CTCATCATGGATATCCGGTTCATGGATCCGAAGTAGAGATC < 41bp 1 0.503336211001725 1 0.113647252321243 experiment 0.99332757799655 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428893 chr11:57428901 nonsynonymous SNV 0.967 3 29 hm5C_associated_SNPs_41080 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:57428891-57428906
64251 chr16 67671689 67671689 1 + G T UCEC 67671677 + 67671657 67671697 41 AAAAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAG AAAAAGAGCCAGATGCTGAGCCCGCAGAGGGATAGGAAGAG < 41bp 1 0.245508302627982 1 0.0788452625274658 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671677 chr16:67671689 stopgain 0.923 1 33 hm5C_associated_SNPs_41081 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671689 67671689 1 + G T UCEC 67671678 + 67671658 67671698 41 AAAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGG AAAAGAGCCAGATGCTGAGCCCGCAGAGGGATAGGAAGAGG < 41bp 1 0.605625795250408 1 0.403919249773026 experiment 0.788748409499185 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671678 chr16:67671689 stopgain 0.923 1 32 hm5C_associated_SNPs_41082 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671689 67671689 1 + G T UCEC 67671679 + 67671659 67671699 41 AAAGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGA AAAGAGCCAGATGCTGAGCCCGCAGAGGGATAGGAAGAGGA < 41bp 1 0.441987428515821 1 0.205687314271927 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671679 chr16:67671689 stopgain 0.923 1 31 hm5C_associated_SNPs_41083 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr16 67671689 67671689 1 + G T UCEC 67671681 + 67671661 67671701 41 AGAGCCAGATGCTGAGCCCGCAGAGGGAGAGGAAGAGGAGG AGAGCCAGATGCTGAGCCCGCAGAGGGATAGGAAGAGGAGG < 41bp 1 0.646013379256207 1 0.571854829788208 experiment 0.707973241487585 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CTCF ENSG00000102974 CDS Human protein_coding chr16:67671681 chr16:67671689 stopgain 0.923 1 29 hm5C_associated_SNPs_41084 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67671660-67671695
64251 chr3 33855118 33855118 1 + T C UCEC 33855117 + 33855097 33855137 41 TTTTTGGAGGCTCTGTAAAACTGGGTATGTAATTTTTAATA TTTTTGGAGGCTCTGTAAAACCGGGTATGTAATTTTTAATA < 41bp 1 0.661143254090448 1 0.408660918474197 experiment 0.677713491819103 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33855117 chr3:33855118 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_41085 0 0 6 DDX24 POSTAR2 ENCODE chr3:33855064-33855122
64251 chr11 65271704 65271704 1 + T C UCEC 65271692 + 65271672 65271712 41 GTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGC GTTCTAGTGAGTGTATGAGACCTTGCAGTGAGCTTATCAGC < 41bp 1 0.12203272365866 1 0.0611089766025543 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271692 chr11:65271704 . . 0 33 hm5C_associated_SNPs_41087 0 0 109 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271400-65271740
64251 chr13 114203818 114203818 1 + T C UCEC 114203825 + 114203805 114203845 41 TGCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCCA TGCAATCACGAGGCGTGTGCCCAGACCGGAGAGACGGTCCA < 41bp 1 0.693878213502892 1 0.143277257680893 experiment 0.612243572994216 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114203825 chr13:114203818 nonsynonymous SNV 0.089 1 14 hm5C_associated_SNPs_41088 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:114203818-114203819
64251 chr13 114203818 114203818 1 + T C UCEC 114203826 + 114203806 114203846 41 GCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCCAG GCAATCACGAGGCGTGTGCCCAGACCGGAGAGACGGTCCAG < 41bp 1 0.638928997919891 1 0.290119409561157 experiment 0.722142004160217 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114203826 chr13:114203818 nonsynonymous SNV 0.089 1 13 hm5C_associated_SNPs_41089 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:114203818-114203819
64251 chr2 235943705 235943705 1 + A G UCEC 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGGGGGGACC < 41bp 1 0.263451434206765 1 0.259331881999969 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943705 nonsynonymous SNV 0.998 4 34 hm5C_associated_SNPs_41090 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:235943696-235943719
64251 chr20 52835655 52835655 1 + G A UCEC 52835659 + 52835639 52835679 41 TTGTATGCAAAATTCGGGAGCAACATAAACCTTGAAGCTGA TTGTATGCAAAATTCGAGAGCAACATAAACCTTGAAGCTGA < 41bp 1 0.703627827600271 1 0.103032261133194 experiment 0.592744344799458 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52835659 chr20:52835655 nonsynonymous SNV 0.982 4 17 hm5C_associated_SNPs_41091 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr20:52835560-52835685
64251 chr3 126751383 126751383 1 + A G UCEC 126751389 + 126751369 126751409 41 CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA CTGGGCAAGGACTCGCCCTCCAACAAGCTGCTCTACGCCAA < 41bp 1 0.459762395078453 1 0.578338205814362 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751389 chr3:126751383 synonymous SNV . 0 15 hm5C_associated_SNPs_41092 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126751366-126751390
64251 chr12 132546867 132546867 1 + A G UCEC 132546853 + 132546833 132546873 41 CCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGGTAAA CCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAGGGTAAA < 41bp 1 0.140998748824473 1 0.0674214959144592 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546853 chr12:132546867 synonymous SNV . 0 35 hm5C_associated_SNPs_41093 0 0 2 DDX24 POSTAR2 ENCODE chr12:132546832-132546867
64251 chr17 17697203 17697203 1 + A G UCEC 17697208 + 17697188 17697228 41 CCAAGTATCAGCACTACGGGCAGCAAGGCCAGGGCTACTGC CCAAGTATCAGCACTGCGGGCAGCAAGGCCAGGGCTACTGC < 41bp 1 0.48644576447731 1 0.243776917457581 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697208 chr17:17697203 nonsynonymous SNV 0.991 4 16 hm5C_associated_SNPs_41094 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:17697202-17697203
64251 chr1 36752589 36752589 1 + G A UCEC 36752584 + 36752564 36752604 41 CGGGAGCGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGT CGGGAGCGAAGCCCAGCTCTCAAAAACCCCCTCCAGTCTGT < 41bp 1 0.794950174558086 1 0.685379385948181 experiment 0.410099650883829 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752584 chr1:36752589 nonsynonymous SNV 0.999 4 26 hm5C_associated_SNPs_41095 0 0 11 FMR1 POSTAR2 ENCODE chr1:36752565-36752645
64251 chr7 150772765 150772765 1 + T C UCEC 150772775 + 150772755 150772795 41 TTCCTGTACATGGGAGTCACCTCCCTTAACGGGATCCAGTT TTCCTGTACACGGGAGTCACCTCCCTTAACGGGATCCAGTT < 41bp 1 0.311456069405473 1 0.371352165937424 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772775 chr7:150772765 nonsynonymous SNV 1.000 5 11 hm5C_associated_SNPs_41096 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:150772742-150772774
64251 chr15 40259727 40259727 1 + T A UCEC 40259728 + 40259708 40259748 41 CAGGCCCCATCCCTGTGCATCAGCTTCGCAGGTACACAGCT CAGGCCCCATCCCTGTGCAACAGCTTCGCAGGTACACAGCT < 41bp 1 0.263818102599705 1 0.128610849380493 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40259728 chr15:40259727 nonsynonymous SNV 0.924 1 20 hm5C_associated_SNPs_41097 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40259700-40259740
64251 chr19 38871592 38871592 1 + C A UCEC 38871607 + 38871587 38871627 41 ATCCCCGCCGAGAGCTACACCTTCTTCATTGACATCCTGCT ATCCCAGCCGAGAGCTACACCTTCTTCATTGACATCCTGCT < 41bp 1 0.148601134528132 1 0.0511108636856079 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38871607 chr19:38871592 synonymous SNV . 0 6 hm5C_associated_SNPs_41098 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:38871578-38871616
64251 chr16 30096343 30096343 1 + G A UCEC 30096347 + 30096327 30096367 41 CCCCAAGAGACACGGGGCATCCCCTCCAAGAAGCCCGTGGC CCCCAAGAGACACGGGACATCCCCTCCAAGAAGCCCGTGGC < 41bp 1 0.350585621879686 1 0.210889339447021 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096347 chr16:30096343 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_41099 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30096303-30096356
64251 chr9 107515202 107515202 1 + G A UCEC 107515213 + 107515193 107515233 41 TTGCTCATCGAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT TTGCTCATCAAACTGAAGTTCGGAAAGCCTTGGCCAAAGAT < 41bp 1 0.696842208452964 1 0.853995323181152 experiment 0.606315583094072 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NIPSNAP3A ENSG00000136783 CDS Human protein_coding chr9:107515213 chr9:107515202 nonsynonymous SNV 0.929 3 10 hm5C_associated_SNPs_41100 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:107515189-107515207
64251 chr22 35783067 35783067 1 + C A UCEC 35783079 + 35783059 35783099 41 ACCAAGTTCAAGCAGCTCTACCGCTCCCGCATGAACTCCCT ACCAAGTTAAAGCAGCTCTACCGCTCCCGCATGAACTCCCT < 41bp 1 0.158798304822763 1 0.0881662964820862 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783079 chr22:35783067 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_41101 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr17 64785035 64785035 1 + C T UCEC 64785043 + 64785023 64785063 41 CATGCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAA CATGCCTTCTTCTGGAGGATCGACTGGGAAAAACTGGAGAA < 41bp 1 0.304012142382962 1 0.347363293170929 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785043 chr17:64785035 nonsynonymous SNV 0.998 4 13 hm5C_associated_SNPs_41102 0 0 3 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr17 64785035 64785035 1 + C T UCEC 64785046 + 64785026 64785066 41 GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAG GCCTTCTTCTGGAGGATCGACTGGGAAAAACTGGAGAACAG < 41bp 1 0.593801080058008 1 0.461277037858963 experiment 0.812397839883983 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785046 chr17:64785035 nonsynonymous SNV 0.998 4 10 hm5C_associated_SNPs_41103 0 0 3 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr3 160122152 160122152 1 + T G UCEC 160122141 + 160122121 160122161 41 GGATGATTATGAAGTCATTCCTAACAGTAATTTCTATGTAT GGATGATTATGAAGTCATTCCTAACAGTAATGTCTATGTAT < 41bp 1 0.10881399030218 1 0.0322751998901367 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160122141 chr3:160122152 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_41105 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160122128-160122179
64251 chr3 160122152 160122152 1 + T G UCEC 160122171 + 160122151 160122191 41 TTTCTATGTATCCAGAACGGCCTGCAGAGATAATACTTCTG TGTCTATGTATCCAGAACGGCCTGCAGAGATAATACTTCTG < 41bp 1 0.0348665170782254 1 0.0605757534503937 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160122171 chr3:160122152 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_41106 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160122128-160122179
64251 chr3 58112453 58112453 1 + G T UCEC 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTCGCACCGGGGGATTACTATGTTA < 41bp 1 0.469296722049702 1 0.106759041547775 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112453 nonsynonymous SNV 0.974 5 35 hm5C_associated_SNPs_41108 0 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr3 58112453 58112453 1 + G T UCEC 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTCGCACCGGGGGATTACTATGTTAAT < 41bp 1 0.207750743172245 1 0.27865332365036 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112453 nonsynonymous SNV 0.974 5 33 hm5C_associated_SNPs_41109 0 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr3 58112453 58112453 1 + G T UCEC 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTCGCACCGGGGGATTACTATGTTAATA < 41bp 1 0.471808073379017 1 0.857242465019226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112453 nonsynonymous SNV 0.974 5 32 hm5C_associated_SNPs_41110 0 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr11 43411205 43411205 1 + C T UCEC 43411217 + 43411197 43411237 41 AACAGAAACAATTAGTTGCTCAAAAAATTCACATAGAAGAG AACAGAAATAATTAGTTGCTCAAAAAATTCACATAGAAGAG < 41bp 1 0.434606210722176 1 0.374378025531769 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC17 ENSG00000052841 CDS Human protein_coding chr11:43411217 chr11:43411205 stopgain 0.999 1 9 hm5C_associated_SNPs_41111 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067861 chr11:43411200-43411220
64251 chrX 128695229 128695229 1 + G T UCEC 128695224 + 128695204 128695244 41 TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGTT TGTGAAGGAACAAGAATGGTCCATGTCTGTAGAGAGAGGTT < 41bp 1 0.0678753847701451 1 0.0376727879047394 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128695224 chrX:128695229 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_41112 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:128695166-128695244
64251 chr12 57627366 57627366 1 + G T UCEC 57627364 + 57627344 57627384 41 AGGCCTGCACCCCCATGTTCCGGGAGTACTCCCTGCAGGTT AGGCCTGCACCCCCATGTTCCGTGAGTACTCCCTGCAGGTT < 41bp 1 0.73389515755915 1 0.088031679391861 experiment 0.532209684881701 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627364 chr12:57627366 synonymous SNV . 0 23 hm5C_associated_SNPs_41113 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:57627360-57627409
64251 chr18 56402460 56402460 1 + T C UCEC 56402451 + 56402431 56402471 41 AAGGTGTCAAGGAGCAGAAGCTTTTGAAATCCAGCATTCTG AAGGTGTCAAGGAGCAGAAGCTTTTGAAACCCAGCATTCTG < 41bp 1 0.0462053659392979 1 0.0430289804935455 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MALT1 ENSG00000172175 CDS Human protein_coding chr18:56402451 chr18:56402460 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_41114 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:56402456-56402477
64251 chr6 125550327 125550327 1 + A G UCEC 125550344 + 125550324 125550364 41 GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT GAGGTAAAACAAAAACTCGGCATGAACCTGATGAATGAATT < 41bp 1 0.251642778106928 1 0.0841017663478851 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125550344 chr6:125550327 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_41117 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:125550291-125550329
64251 chr17 42152816 42152816 1 + C A UCEC 42152812 + 42152792 42152832 41 TCTTTACACTGGGCCTGGATCTTTCTTGGTAAGTCTCGCTT TCTTTACACTGGGCCTGGATCTTTATTGGTAAGTCTCGCTT < 41bp 1 0.448636944410884 1 0.297569334506989 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152812 chr17:42152816 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_41120 0 0 3 PPIG POSTAR2 ENCODE chr17:42152784-42152826
64251 chr6 26204962 26204962 1 + T G UCEC 26204977 + 26204957 26204997 41 GGCATTACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG GGCATGACCAAGCCTGCCATCCGGCGCCTTGCTCGTCGCGG < 41bp 1 0.624515612478328 1 0.924871265888214 experiment 0.750968775043344 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient HIST1H4E ENSG00000198518 CDS Human other chr6:26204977 chr6:26204962 nonsynonymous SNV 0.222 0 6 hm5C_associated_SNPs_41121 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26204945-26204972
64251 chr22 46681142 46681142 1 + A G UCEC 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCGGATATGAGGCCGCGCTGAC < 41bp 1 0.181528581822201 1 0.522590219974518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681142 nonsynonymous SNV 0.041 1 23 hm5C_associated_SNPs_41125 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chr22 42042985 42042985 1 + A C UCEC 42042976 + 42042956 42042996 41 TCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGG TCCAGAAGGCTCTCAAGCCTCCTCCAATACAGCTCTATCGG < 41bp 1 0.102044446421806 1 0.182749718427658 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42042976 chr22:42042985 nonsynonymous SNV 0.350 1 30 hm5C_associated_SNPs_41126 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:42042960-42043000
64251 chr1 10328295 10328295 1 + A G UCEC 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATGATGAGACCAACCTTTCCACTGAGAAGGTAGG < 41bp 1 0.00340755759332981 1 0.0318421423435211 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328295 nonsynonymous SNV 0.886 0 10 hm5C_associated_SNPs_41127 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chrX 70779268 70779268 1 + A G UCEC 70779251 + 70779231 70779271 41 CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAAATT CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAGATT < 41bp 1 0.065906867175863 1 0.0531978607177734 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70779251 chrX:70779268 nonsynonymous SNV 0.999 1 38 hm5C_associated_SNPs_41128 0 0 4 DDX24 POSTAR2 ENCODE chrX:70779236-70779272
64251 chr19 17424881 17424881 1 + G A UCEC 17424890 + 17424870 17424910 41 CAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGCCT CAATTTTAGTCAATTTCACGCGGACTCCGTGTGCAAAGCCT < 41bp 1 0.166790051677606 1 0.16892609000206 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424890 chr19:17424881 nonsynonymous SNV 0.885 1 12 hm5C_associated_SNPs_41129 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:17424875-17424904
64251 chr11 118369106 118369106 1 + C T UCEC 118369113 + 118369093 118369133 41 ATTCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTCA ATTCTGCCAAAAGTCAGGAGCCACCGTGGGTTGCTGTCTCA < 41bp 1 0.0211967557983011 1 0.163427501916885 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118369113 chr11:118369106 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_41130 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:118369080-118369113
64251 chr15 36989526 36989526 1 + C T UCEC 36989527 + 36989507 36989547 41 TAACTGAAACTTCCCAGTGCCATTGGTCATGAGCATGAGGT TAACTGAAACTTCCCAGTGTCATTGGTCATGAGCATGAGGT < 41bp 1 0.130316443389098 1 0.0339178740978241 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989527 chr15:36989526 nonsynonymous SNV 0.999 1 20 hm5C_associated_SNPs_41131 0 0 1 DDX6 POSTAR2 ENCODE chr15:36989523-36989531
64251 chr15 36989526 36989526 1 + C T UCEC 36989540 + 36989520 36989560 41 CCAGTGCCATTGGTCATGAGCATGAGGTCCTGCTGAGAGAC CCAGTGTCATTGGTCATGAGCATGAGGTCCTGCTGAGAGAC < 41bp 1 0.718207537664101 1 0.354310214519501 experiment 0.563584924671797 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C15orf41 ENSG00000186073 CDS Human protein_coding chr15:36989540 chr15:36989526 nonsynonymous SNV 0.999 1 7 hm5C_associated_SNPs_41132 0 0 1 DDX6 POSTAR2 ENCODE chr15:36989523-36989531
64251 chr9 134064467 134064467 1 + T G UCEC 134064468 + 134064448 134064488 41 AATAAATTCCCTTAAGCCATCTGGGCCTACACCAGCATCCG AATAAATTCCCTTAAGCCAGCTGGGCCTACACCAGCATCCG < 41bp 1 0.437443530612693 1 0.482708841562271 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP214 ENSG00000126883 CDS Human protein_coding chr9:134064468 chr9:134064467 nonsynonymous SNV 0.921 0 20 hm5C_associated_SNPs_41142 0 0 6 FXR2 POSTAR2 ENCODE chr9:134064455-134064494
64251 chrX 69519027 69519027 1 + G A UCEC 69519014 + 69518994 69519034 41 GCCCATCTCGTGAGAAAGCTCAAATAAATATACGAGAGGAT GCCCATCTCGTGAGAAAGCTCAAATAAATATACAAGAGGAT < 41bp 1 0.135135662770961 1 0.229261010885239 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69519014 chrX:69519027 nonsynonymous SNV 0.991 3 34 hm5C_associated_SNPs_41143 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:69519011-69519043
64251 chr6 32134695 32134695 1 + G A UCEC 32134701 + 32134681 32134721 41 CCTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTC CCTCAGCCATCTGCACCAAGCCTTGCCTGAACGGAGGCGTC < 41bp 1 0.0564479003160598 1 0.0348811149597168 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134701 chr6:32134695 nonsynonymous SNV 0.987 0 15 hm5C_associated_SNPs_41144 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:32134668-32134707
64251 chr6 32134695 32134695 1 + G A UCEC 32134702 + 32134682 32134722 41 CTCAGCCATCTGCGCCAAGCCTTGCCTGAACGGAGGCGTCT CTCAGCCATCTGCACCAAGCCTTGCCTGAACGGAGGCGTCT < 41bp 1 0.172252662727201 1 0.035174697637558 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EGFL8 ENSG00000241404 CDS Human protein_coding chr6:32134702 chr6:32134695 nonsynonymous SNV 0.987 0 14 hm5C_associated_SNPs_41145 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:32134668-32134707
64251 chr15 57554394 57554394 1 + G T UCEC 57554381 + 57554361 57554401 41 ACTTCAAGCACAGACCTGAACCATAAAACACAAGAAAATTA ACTTCAAGCACAGACCTGAACCATAAAACACAATAAAATTA < 41bp 1 0.162723718062768 1 0.184533983469009 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554381 chr15:57554394 stopgain 0.997 1 34 hm5C_associated_SNPs_41148 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554394 57554394 1 + G T UCEC 57554382 + 57554362 57554402 41 CTTCAAGCACAGACCTGAACCATAAAACACAAGAAAATTAT CTTCAAGCACAGACCTGAACCATAAAACACAATAAAATTAT < 41bp 1 0.244079644847906 1 0.468483924865723 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554382 chr15:57554394 stopgain 0.997 1 33 hm5C_associated_SNPs_41149 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554394 57554394 1 + G T UCEC 57554389 + 57554369 57554409 41 CACAGACCTGAACCATAAAACACAAGAAAATTATAGAGGTA CACAGACCTGAACCATAAAACACAATAAAATTATAGAGGTA < 41bp 1 0.51752856508092 1 0.474849432706833 experiment 0.964942869838159 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554389 chr15:57554394 stopgain 0.997 1 26 hm5C_associated_SNPs_41150 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr19 48675220 48675220 1 + C T UCEC 48675236 + 48675216 48675256 41 CTGGCGCGCTGCCGCTGGGCCAGTGCGCCCCCGCTCTACAC CTGGTGCGCTGCCGCTGGGCCAGTGCGCCCCCGCTCTACAC < 41bp 1 0.63991537546821 1 0.35101917386055 experiment 0.72016924906358 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control C19orf68 ENSG00000185453 CDS Human protein_coding chr19:48675236 chr19:48675220 nonsynonymous SNV 0.988 0 5 hm5C_associated_SNPs_41151 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:48675190-48675228
64251 chr2 219676983 219676983 1 + A G UCEC 219676979 + 219676959 219676999 41 GGTACCAGCTGCGCCAGGCTCTGAACCAGCGGTTGCTGAAG GGTACCAGCTGCGCCAGGCTCTGAGCCAGCGGTTGCTGAAG < 41bp 1 0.697356205254994 1 0.673055052757263 experiment 0.605287589490012 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219676979 chr2:219676983 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_41153 0 0 3 GRWD1 POSTAR2 ENCODE chr2:219676943-219677001
64251 chr12 48528818 48528818 1 + G T UCEC 48528825 + 48528805 48528845 41 CAGAAGACATCAAGAATGTTCGTATGAATGAAGCCAGAGAG CAGAAGACATCAATAATGTTCGTATGAATGAAGCCAGAGAG < 41bp 1 0.217679776126148 1 0.182522237300873 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PFKM ENSG00000152556 CDS Human protein_coding chr12:48528825 chr12:48528818 nonsynonymous SNV 0.761 4 14 hm5C_associated_SNPs_41154 0 0 1 BUD13 POSTAR2 ENCODE chr12:48528731-48528914
64251 chr5 131976476 131976476 1 + C A UCEC 131976460 + 131976440 131976480 41 AGCCAACAACAAATCTTGACCGAGAAAACATTGAATCTCTT AGCCAACAACAAATCTTGACCGAGAAAACATTGAATATCTT < 41bp 1 0.605144985691502 1 0.495613366365433 experiment 0.789710028616996 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131976460 chr5:131976476 nonsynonymous SNV 0.977 3 37 hm5C_associated_SNPs_41155 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131976416-131976492
64251 chr2 48026153 48026153 1 + A C UCEC 48026173 + 48026153 48026193 41 AAAATTCTGAATCCCAAGCCCACGTTAGTGGAGGTGGTGAT CAAATTCTGAATCCCAAGCCCACGTTAGTGGAGGTGGTGAT < 41bp 1 0.439438774887426 1 0.127356320619583 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026173 chr2:48026153 nonsynonymous SNV 0.577 1 1 hm5C_associated_SNPs_41157 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:48026121-48026159
64251 chr12 105519813 105519813 1 + A C UCEC 105519794 + 105519774 105519814 41 CTGTCTAGGCCTGTATAGAACAACAATTTGATTCTCTCAAT CTGTCTAGGCCTGTATAGAACAACAATTTGATTCTCTCACT < 41bp 1 0.707427478360875 1 0.136003792285919 experiment 0.585145043278249 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105519794 chr12:105519813 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_41158 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:105519795-105519831
64251 chr8 97316316 97316316 1 + C T UCEC 97316303 + 97316283 97316323 41 CACCGGGAAGATCAAGAGAGCTGTTCTGCAGTTCACTCCTG CACCGGGAAGATCAAGAGAGCTGTTCTGCAGTTTACTCCTG < 41bp 1 0.262884230203859 1 0.0424289107322693 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97316303 chr8:97316316 synonymous SNV . 0 34 hm5C_associated_SNPs_41159 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:97316292-97316324
64251 chrX 70517706 70517706 1 + G A UCEC 70517707 + 70517687 70517727 41 CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG CAGGAGGAAGAGCGCAGGCACCGTGAAGAAGAGATGCGGCG < 41bp 1 0.247964400271472 1 0.323331475257874 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517707 chrX:70517706 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_41160 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70517674-70517712
64251 chr16 53358286 53358286 1 + T C UCEC 53358269 + 53358249 53358289 41 CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTGG CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGCTGG < 41bp 1 0.767798013006977 1 0.904834032058716 experiment 0.464403973986047 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53358269 chr16:53358286 synonymous SNV . 0 38 hm5C_associated_SNPs_41161 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:53358272-53358295
64251 chr15 101169706 101169706 1 + C T UCEC 101169701 + 101169681 101169721 41 CTCTTCACTATGCAGCCATGCATGGCCGGGCCCGCATTGCA CTCTTCACTATGCAGCCATGCATGGTCGGGCCCGCATTGCA < 41bp 1 0.473410097092327 1 0.147948831319809 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169701 chr15:101169706 synonymous SNV . 0 26 hm5C_associated_SNPs_41164 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:101169702-101169736
64251 chr9 33917139 33917139 1 + C T UCEC 33917126 + 33917106 33917146 41 GCCTTCCAATGACAACAGCTCAGATTTGCTTTACGACGACT GCCTTCCAATGACAACAGCTCAGATTTGCTTTATGACGACT < 41bp 1 0.239823870495533 1 0.118240296840668 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917126 chr9:33917139 synonymous SNV . 0 34 hm5C_associated_SNPs_41165 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917139 33917139 1 + C T UCEC 33917142 + 33917122 33917162 41 AGCTCAGATTTGCTTTACGACGACTTGTATGATGACGACAT AGCTCAGATTTGCTTTATGACGACTTGTATGATGACGACAT < 41bp 1 0.424840211830435 1 0.0512970685958862 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917142 chr9:33917139 synonymous SNV . 0 18 hm5C_associated_SNPs_41166 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr9 33917139 33917139 1 + C T UCEC 33917145 + 33917125 33917165 41 TCAGATTTGCTTTACGACGACTTGTATGATGACGACATTGA TCAGATTTGCTTTATGACGACTTGTATGATGACGACATTGA < 41bp 1 0.151192488807097 1 0.0497819781303406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33917145 chr9:33917139 synonymous SNV . 0 15 hm5C_associated_SNPs_41167 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr9:33917116-33917234
64251 chr13 52604954 52604954 1 + C T UCEC 52604967 + 52604947 52604987 41 TGAGAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAG TGAGAAGTGCAACATCCACGCAGCAGCTCATCAGGTACAAG < 41bp 1 0.629800555553162 1 0.259109646081924 experiment 0.740398888893675 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604967 chr13:52604954 nonsynonymous SNV 0.936 2 8 hm5C_associated_SNPs_41168 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:52604944-52604956
64251 chr13 52604954 52604954 1 + C T UCEC 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGTGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC < 41bp 1 0.156062131849064 1 0.079890251159668 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604954 nonsynonymous SNV 0.936 2 5 hm5C_associated_SNPs_41169 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:52604944-52604956
64251 chr3 126707713 126707713 1 + G A UCEC 126707697 + 126707677 126707717 41 CTGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAA CTGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACAAGAA < 41bp 1 0.0404040595993477 1 0.0779686570167542 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707697 chr3:126707713 nonsynonymous SNV 0.996 0 37 hm5C_associated_SNPs_41170 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707700-126707720
64251 chr3 126707713 126707713 1 + G A UCEC 126707698 + 126707678 126707718 41 TGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAG TGCGGGCCCACGTCACGGGCCCTGTGGAGGACAACAAGAAG < 41bp 1 0.024546046249691 1 0.0743025839328766 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707698 chr3:126707713 nonsynonymous SNV 0.996 0 36 hm5C_associated_SNPs_41171 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707700-126707720
64251 chr3 126707713 126707713 1 + G A UCEC 126707699 + 126707679 126707719 41 GCGGGCCCACGTCACGGGCCCTGTGGAGGACAACGAGAAGT GCGGGCCCACGTCACGGGCCCTGTGGAGGACAACAAGAAGT < 41bp 1 0.147217638288701 1 0.11366081237793 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126707699 chr3:126707713 nonsynonymous SNV 0.996 0 35 hm5C_associated_SNPs_41172 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:126707700-126707720
64251 chr10 70726913 70726913 1 + A G UCEC 70726923 + 70726903 70726943 41 TGGATATGGGATTTGCTGATCAAGTGGAAGAGATTTTAAGT TGGATATGGGGTTTGCTGATCAAGTGGAAGAGATTTTAAGT < 41bp 1 0.515687118509964 1 0.542935132980347 experiment 0.968625762980072 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70726923 chr10:70726913 synonymous SNV . 0 11 hm5C_associated_SNPs_41173 0 0 38 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70726810-70726955
64251 chrX 64956690 64956690 1 + A C UCEC 64956685 + 64956665 64956705 41 TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAGAAGGAG TGGAAAATGAGAAGAAGAAGCGTGACATGGCAGAGAAGGAG < 41bp 1 0.499879035302556 1 0.626468777656555 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956685 chrX:64956690 nonsynonymous SNV 0.986 1 26 hm5C_associated_SNPs_41174 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956690 64956690 1 + A C UCEC 64956695 + 64956675 64956715 41 GAAGAAGAAGCGTGAAATGGCAGAGAAGGAGAAAGAGAAGA GAAGAAGAAGCGTGACATGGCAGAGAAGGAGAAAGAGAAGA < 41bp 1 0.510201131269502 1 0.431357324123383 experiment 0.979597737460997 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956695 chrX:64956690 nonsynonymous SNV 0.986 1 16 hm5C_associated_SNPs_41175 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chr9 96411449 96411449 1 + G A UCEC 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GCACCAACCACAAGCGGGTCCTCAACGTCACCAACCTCGAG < 41bp 1 0.432441982094492 1 0.305744171142578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411449 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_41176 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:96411448-96411449
64251 chr6 142758649 142758649 1 + G T UCEC 142758630 + 142758610 142758650 41 ATGTTCAGAAACAGTGGCGGCAGCATCTCTGCTGTGGTAGA ATGTTCAGAAACAGTGGCGGCAGCATCTCTGCTGTGGTATA < 41bp 1 0.448924214830519 1 0.134108662605286 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142758630 chr6:142758649 nonsynonymous SNV 0.997 4 40 hm5C_associated_SNPs_41177 0 0 2 IGF2BP1 POSTAR2 ENCODE chr6:142758609-142758656
64251 chr3 129197039 129197039 1 + C T UCEC 129197026 + 129197006 129197046 41 AGAAGTTTGAGTGCAACCTCCTGGTGGTGTGTGCCAATCAC AGAAGTTTGAGTGCAACCTCCTGGTGGTGTGTGTCAATCAC < 41bp 1 0.679818197111644 1 0.22866553068161 experiment 0.640363605776713 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT122 ENSG00000163913 CDS Human protein_coding chr3:129197026 chr3:129197039 nonsynonymous SNV 0.510 2 34 hm5C_associated_SNPs_41178 0 0 4 DDX24 POSTAR2 ENCODE chr3:129197013-129197050
64251 chr11 64132927 64132927 1 + G A UCEC 64132923 + 64132903 64132943 41 GCAGCCCCCCACCTGGGGACCCCCGAATCTTTCAGGTGAGG GCAGCCCCCCACCTGGGGACCCCCAAATCTTTCAGGTGAGG < 41bp 1 0.182603381725824 1 0.15715691447258 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64132923 chr11:64132927 nonsynonymous SNV 0.912 2 25 hm5C_associated_SNPs_41179 0 0 4 PRPF8 POSTAR2 ENCODE chr11:64132880-64132970
64251 chr14 64990086 64990086 1 + C T UCEC 64990092 + 64990072 64990112 41 GAGAGCGTCAGTTGCGACTGCACAATGATATGCACAAAGGC GAGAGCGTCAGTTGTGACTGCACAATGATATGCACAAAGGC < 41bp 1 0.635701691749866 1 0.684686541557312 experiment 0.728596616500269 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64990092 chr14:64990086 stopgain 1.000 0 15 hm5C_associated_SNPs_41180 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:64990067-64990094
64251 chr19 17836865 17836865 1 + C A UCEC 17836880 + 17836860 17836900 41 CCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT CCCTTAGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCT < 41bp 1 0.541171096930927 1 0.538652062416077 experiment 0.917657806138146 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836880 chr19:17836865 nonsynonymous SNV 0.166 4 6 hm5C_associated_SNPs_41182 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17836865 17836865 1 + C A UCEC 17836882 + 17836862 17836902 41 CTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA CTTAGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTCA < 41bp 1 0.376946226562039 1 0.524387717247009 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836882 chr19:17836865 nonsynonymous SNV 0.166 4 4 hm5C_associated_SNPs_41183 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr19 17615403 17615403 1 + G A UCEC 17615397 + 17615377 17615417 41 GAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCT GAGGCAGTCTACACTCGCATCTGCTCAGGCGCCTTCGCCCT < 41bp 1 0.308618227242982 1 0.0670866072177887 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615397 chr19:17615403 synonymous SNV . 0 27 hm5C_associated_SNPs_41184 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr14 96553036 96553036 1 + C A UCEC 96553020 + 96553000 96553040 41 GCTATGGATTGCCATCATAGCTACGCTGGGGAACATCGTGG GCTATGGATTGCCATCATAGCTACGCTGGGGAACATAGTGG < 41bp 1 0.541140518473275 1 0.225440829992294 experiment 0.917718963053449 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C14orf132 ENSG00000227051 UTR5 Human protein_coding chr14:96553020 chr14:96553036 . . 0 37 hm5C_associated_SNPs_41186 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:96553020-96553040
64251 chr1 162470001 162470001 1 + C A UCEC 162470019 + 162469999 162470039 41 CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT CTAATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT < 41bp 1 0.378493635712755 1 0.129003942012787 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470019 chr1:162470001 synonymous SNV . 0 3 hm5C_associated_SNPs_41187 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469904-162470036
64251 chr2 203157522 203157522 1 + G A UCEC 203157511 + 203157491 203157531 41 TTATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCT TTATACTAGGTGATTGAAATCTCTGAATATCAAACCCAGCT < 41bp 1 0.484275050868028 1 0.387015461921692 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157511 chr2:203157522 nonsynonymous SNV 0.998 4 32 hm5C_associated_SNPs_41188 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:203157492-203157572
64251 chrX 64887716 64887716 1 + A C UCEC 64887704 + 64887684 64887724 41 CAACTCCGCTGCCTTTGCCGCCACCATGCCCAAAACGGTGA CAACTCCGCTGCCTTTGCCGCCACCATGCCCACAACGGTGA < 41bp 1 0.309614157390452 1 0.0791624784469604 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MSN ENSG00000147065 CDS Human protein_coding chrX:64887704 chrX:64887716 nonsynonymous SNV 0.958 1 33 hm5C_associated_SNPs_41189 0 0 2 YBX3 POSTAR2 ENCODE chrX:64887690-64887720
64251 chrX 64887716 64887716 1 + A C UCEC 64887705 + 64887685 64887725 41 AACTCCGCTGCCTTTGCCGCCACCATGCCCAAAACGGTGAG AACTCCGCTGCCTTTGCCGCCACCATGCCCACAACGGTGAG < 41bp 1 0.611235698462535 1 0.24550998210907 experiment 0.77752860307493 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MSN ENSG00000147065 CDS Human protein_coding chrX:64887705 chrX:64887716 nonsynonymous SNV 0.958 1 32 hm5C_associated_SNPs_41190 0 0 2 YBX3 POSTAR2 ENCODE chrX:64887690-64887720
64251 chr11 118344547 118344547 1 + G T UCEC 118344564 + 118344544 118344584 41 AGAGAAAAGGAAAAAGGGATCAGAAATTCAGAGTAGTTCTG AGATAAAAGGAAAAAGGGATCAGAAATTCAGAGTAGTTCTG < 41bp 1 0.321695955356648 1 0.562376856803894 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118344564 chr11:118344547 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_41192 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:118344527-118344548
64251 chr5 137767202 137767202 1 + T G UCEC 137767210 + 137767190 137767230 41 TGACTCAGGAATTCAGGCATCTCTCTAACACTCATACAAAT TGACTCAGGAATGCAGGCATCTCTCTAACACTCATACAAAT < 41bp 1 0.0880579845871562 1 0.448443681001663 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137767210 chr5:137767202 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_41193 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:137767163-137767229
64251 chr11 75115798 75115798 1 + C T UCEC 75115815 + 75115795 75115835 41 CCACGTGAGCATTGTGGAACCCAAAGATGAGATACTGCCCA CCATGTGAGCATTGTGGAACCCAAAGATGAGATACTGCCCA < 41bp 1 0.65326667301936 1 0.395027816295624 experiment 0.69346665396128 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS3 ENSG00000149273 CDS Human protein_coding chr11:75115815 chr11:75115798 synonymous SNV . 0 4 hm5C_associated_SNPs_41194 0 0 54 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:75115760-75115820
64251 chr21 45217968 45217968 1 + G T UCEC 45217948 + 45217928 45217968 41 GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAG GTGGTGAGCGTGGAGACGCGCTGTCCCAGAAGAGGTCTGAT < 41bp 1 0.167627687905403 1 0.284283876419067 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217948 chr21:45217968 nonsynonymous SNV 0.005 0 41 hm5C_associated_SNPs_41195 0 0 3 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr21 45217968 45217968 1 + G T UCEC 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG CGCGCTGTCCCAGAAGAGGTCTGATAAGCCGCCCGCAGGTG < 41bp 1 0.499545053031942 1 0.0884797275066376 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217968 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_41196 0 0 3 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr1 207498023 207498023 1 + G T UCEC 207498032 + 207498012 207498052 41 GTTACAGAAGAGAACCTTCTCTATCACCAAAACTAACTTGC GTTACAGAAGATAACCTTCTCTATCACCAAAACTAACTTGC < 41bp 1 0.187210854178782 1 0.132424980401993 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CD55 ENSG00000196352 CDS Human protein_coding chr1:207498032 chr1:207498023 stopgain 0.001 0 12 hm5C_associated_SNPs_41199 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:207498018-207498032
64251 chr16 1793378 1793378 1 + C T UCEC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGAACGTGTTCCCCCTGGCTGATGGCACGGTACG < 41bp 1 0.140027301006347 1 0.13862806558609 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793378 synonymous SNV . 0 30 hm5C_associated_SNPs_41200 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr16:1793360-1793380
64251 chr1 120286596 120286596 1 + C T UCEC 120286594 + 120286574 120286614 41 ACCTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCT ACCTGGCACGTCATGGGCATCTTCTCCTTGCTGCCCAGCCT < 41bp 1 0.231642538327794 1 0.0360862016677856 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286594 chr1:120286596 nonsynonymous SNV 0.992 5 23 hm5C_associated_SNPs_41201 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286596 120286596 1 + C T UCEC 120286597 + 120286577 120286617 41 TGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGA TGGCACGTCATGGGCATCTTCTCCTTGCTGCCCAGCCTGGA < 41bp 1 0.634341921655117 1 0.542988777160645 experiment 0.731316156689766 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286597 chr1:120286596 nonsynonymous SNV 0.992 5 20 hm5C_associated_SNPs_41202 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286596 120286596 1 + C T UCEC 120286600 + 120286580 120286620 41 CACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGAAGC CACGTCATGGGCATCTTCTCCTTGCTGCCCAGCCTGGAAGC < 41bp 1 0.421981025533399 1 0.479301869869232 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286600 chr1:120286596 nonsynonymous SNV 0.992 5 17 hm5C_associated_SNPs_41203 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr2 11300668 11300668 1 + G A UCEC 11300656 + 11300636 11300676 41 CGCTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGGT CGCTGACCTACCTGGAGTACCCCATCCTCATCACGCAAGGT < 41bp 1 0.181091343774561 1 0.148583024740219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300656 chr2:11300668 nonsynonymous SNV 0.992 0 33 hm5C_associated_SNPs_41204 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:11300640-11300670
64251 chr1 32620221 32620221 1 + C T UCEC 32620232 + 32620212 32620252 41 GACAATTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA GACAATTATTGAATGAAGAGCTATAAGAACAATGCTCTAAA < 41bp 1 0.220531921342532 1 0.2546306848526 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620232 chr1:32620221 stopgain 1.000 1 10 hm5C_associated_SNPs_41205 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32620203-32620233
64251 chr13 28752052 28752052 1 + A G UCEC 28752051 + 28752031 28752071 41 TTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAA TTTAATGACTTTGGTGCCCTCGACATCTCTCAGAGACGAAA < 41bp 1 0.621887477165753 1 0.214514434337616 experiment 0.756225045668495 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752051 chr13:28752052 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_41206 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr13 28752052 28752052 1 + A G UCEC 28752054 + 28752034 28752074 41 AATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGT AATGACTTTGGTGCCCTCGACATCTCTCAGAGACGAAAGGT < 41bp 1 0.101427174741096 1 0.238498419523239 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752054 chr13:28752052 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_41207 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr13 28752052 28752052 1 + A G UCEC 28752057 + 28752037 28752077 41 GACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGG GACTTTGGTGCCCTCGACATCTCTCAGAGACGAAAGGTAGG < 41bp 1 0.132508005256226 1 0.285690724849701 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752057 chr13:28752052 nonsynonymous SNV 1.000 2 16 hm5C_associated_SNPs_41208 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr13 28752052 28752052 1 + A G UCEC 28752059 + 28752039 28752079 41 CTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTG CTTTGGTGCCCTCGACATCTCTCAGAGACGAAAGGTAGGTG < 41bp 1 0.56045609509274 1 0.273006349802017 experiment 0.879087809814521 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752059 chr13:28752052 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_41209 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr13 28752052 28752052 1 + A G UCEC 28752061 + 28752041 28752081 41 TTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTGAA TTGGTGCCCTCGACATCTCTCAGAGACGAAAGGTAGGTGAA < 41bp 1 0.545872895446568 1 0.907371997833252 experiment 0.908254209106863 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752061 chr13:28752052 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_41210 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr17 29325816 29325816 1 + C A UCEC 29325807 + 29325787 29325827 41 AGCTGTGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCA AGCTGTGAGAGGTTTTCTACCAGCCAGGTATTATGTTCCCA < 41bp 1 0.548830128416669 1 0.485435575246811 experiment 0.902339743166662 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF135 ENSG00000181481 CDS Human protein_coding chr17:29325807 chr17:29325816 synonymous SNV . 0 30 hm5C_associated_SNPs_41213 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:29325800-29325820
64251 chr7 128119309 128119309 1 + C T UCEC 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATTTCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.113438931761569 1 0.23765555024147 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119309 synonymous SNV . 0 7 hm5C_associated_SNPs_41215 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr7 91735001 91735001 1 + T G UCEC 91735017 + 91734997 91735037 41 AATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT AATTGTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTT < 41bp 1 0.147004977485662 1 0.295061677694321 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91735017 chr7:91735001 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_41216 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:91735000-91735001
64251 chr20 35866812 35866812 1 + G A UCEC 35866808 + 35866788 35866828 41 CCTCTTTCCTTTGGCAGGATCGCTGCAGAGCAGAGCAGTAG CCTCTTTCCTTTGGCAGGATCGCTACAGAGCAGAGCAGTAG < 41bp 1 0.43656861209344 1 0.573533892631531 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35866808 chr20:35866812 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_41218 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35866786-35866824
64251 chr5 139494059 139494059 1 + G A UCEC 139494074 + 139494054 139494094 41 CAAGAGCCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGT CAAGAACCGCCTTACTCTCTCCATGTCAGTGGCCGTGGAGT < 41bp 1 0.203928306586197 1 0.513371229171753 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PURA ENSG00000185129 CDS Human protein_coding chr5:139494074 chr5:139494059 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_41220 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139494040-139494060
64251 chr2 55191148 55191148 1 + C T UCEC 55191153 + 55191133 55191173 41 CAAGGTGAGCTTGGGCCATGCGGCCAGGTGTGCAGCCTACA CAAGGTGAGCTTGGGTCATGCGGCCAGGTGTGCAGCCTACA < 41bp 1 0.240404636829324 1 0.37557527422905 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EML6 ENSG00000214595 CDS Human protein_coding chr2:55191153 chr2:55191148 synonymous SNV . 0 16 hm5C_associated_SNPs_41222 0 0 1 EIF3H POSTAR2 ENCODE chr2:55191121-55191163
64251 chr7 27211528 27211528 1 - T G UCEC 27211542 - 27211522 27211562 41 GAAAACCGGATCCGGGAGCTCACAGCCAACTTTAATTTTTC GAAAACCGGATCCGGGAGCTCACAGCCAACTTTACTTTTTC < 41bp 1 0.248263047345625 1 0.190158933401108 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXA10 ENSG00000253293 CDS Human protein_coding chr7:27211542 chr7:27211528 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_41223 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:27211459-27211571
64251 chr17 64785043 64785043 1 + C T UCEC 64785046 + 64785026 64785066 41 GCCTTCTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAG GCCTTCTTCCGGAGGATTGACTGGGAAAAACTGGAGAACAG < 41bp 1 0.702080509204499 1 0.582260847091675 experiment 0.595838981591003 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCA ENSG00000154229 CDS Human protein_coding chr17:64785046 chr17:64785043 synonymous SNV . 0 18 hm5C_associated_SNPs_41224 0 0 2 BUD13 POSTAR2 ENCODE chr17:64784999-64785116
64251 chr5 159437859 159437859 1 + G T UCEC 159437849 + 159437829 159437869 41 AGAACTGGAAAAAAACATGTCGGATGAAGAGAAACAGGTAA AGAACTGGAAAAAAACATGTCGGATGAAGATAAACAGGTAA < 41bp 1 0.461834833335423 1 0.651363492012024 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437849 chr5:159437859 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_41226 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159437839-159437861
64251 chr12 19427774 19427774 1 + A C UCEC 19427793 + 19427773 19427813 41 CAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA CCGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTTA < 41bp 1 0.471817620036438 1 0.403457909822464 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19427793 chr12:19427774 synonymous SNV . 0 2 hm5C_associated_SNPs_41229 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:19427759-19427778
64251 chr6 26045878 26045878 1 + A C UCEC 26045888 + 26045868 26045908 41 AGGACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGTG AGGACTTCAACACCGACCTGCGTTTCCAGAGCTCTGCGGTG < 41bp 1 0.0576173027031881 1 0.0612886846065521 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H3C ENSG00000196532 CDS Human other chr6:26045888 chr6:26045878 nonsynonymous SNV 0.994 0 11 hm5C_associated_SNPs_41233 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr5 131930627 131930627 1 + G T UCEC 131930610 + 131930590 131930630 41 AAAATCATATAAATAATGAACTAAAAAGAAAGGAAGAGCAG AAAATCATATAAATAATGAACTAAAAAGAAAGGAAGATCAG < 41bp 1 0.387638305176511 1 0.263985514640808 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131930610 chr5:131930627 nonsynonymous SNV 0.988 1 38 hm5C_associated_SNPs_41234 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:131930599-131930634
64251 chr6 160494395 160494395 1 + G A UCEC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTACAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT < 41bp 1 0.320134813883482 1 0.848462104797363 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494395 nonsynonymous SNV 0.995 5 8 hm5C_associated_SNPs_41235 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:160494354-160494400
64251 chr19 11123752 11123752 1 + G A UCEC 11123747 + 11123727 11123767 41 ATCACGTACCTCATGGAGCACAAACGCATCAATGGGCCCTT ATCACGTACCTCATGGAGCACAAACACATCAATGGGCCCTT < 41bp 1 0.13423110965099 1 0.192901700735092 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11123747 chr19:11123752 nonsynonymous SNV 0.997 4 26 hm5C_associated_SNPs_41236 0 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:11123714-11123776
64251 chr16 24835005 24835005 1 + G A UCEC 24835001 + 24834981 24835021 41 CGGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCC CGGCACTTCACTCTGGGGGACCCCACATTATTCCACAAGCC < 41bp 1 0.183006465639322 1 0.0858815908432007 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835001 chr16:24835005 synonymous SNV . 0 25 hm5C_associated_SNPs_41237 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:24834944-24835019
64251 chr16 24835005 24835005 1 + G A UCEC 24835002 + 24834982 24835022 41 GGCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCT GGCACTTCACTCTGGGGGACCCCACATTATTCCACAAGCCT < 41bp 1 0.0499604034256326 1 0.275382727384567 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835002 chr16:24835005 synonymous SNV . 0 24 hm5C_associated_SNPs_41238 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:24834944-24835019
64251 chr16 24835005 24835005 1 + G A UCEC 24835003 + 24834983 24835023 41 GCACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTG GCACTTCACTCTGGGGGACCCCACATTATTCCACAAGCCTG < 41bp 1 0.436877600417595 1 0.598097503185272 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835003 chr16:24835005 synonymous SNV . 0 23 hm5C_associated_SNPs_41239 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:24834944-24835019
64251 chr16 24835005 24835005 1 + G A UCEC 24835004 + 24834984 24835024 41 CACTTCACTCTGGGGGACCCCGCATTATTCCACAAGCCTGT CACTTCACTCTGGGGGACCCCACATTATTCCACAAGCCTGT < 41bp 1 0.337407125981591 1 0.589502036571503 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835004 chr16:24835005 synonymous SNV . 0 22 hm5C_associated_SNPs_41240 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:24834944-24835019
64251 chr10 91177167 91177167 1 + C T UCEC 91177165 + 91177145 91177185 41 AAAAGGCCAAAATAAAGACGCCCTTGAGTGCTTGGAACAAG AAAAGGCCAAAATAAAGACGCCTTTGAGTGCTTGGAACAAG < 41bp 1 0.0275507361956581 1 0.0904234945774078 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91177165 chr10:91177167 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_41241 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:91177159-91177178
64251 chr1 31905819 31905819 1 + G A UCEC 31905832 + 31905812 31905852 41 AGTCTGCGCTCCTCAGACCACCGGCAGGTGAACAGCCTGAT AGTCTGCACTCCTCAGACCACCGGCAGGTGAACAGCCTGAT < 41bp 1 0.288477010565316 1 0.448188096284866 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31905832 chr1:31905819 nonsynonymous SNV 0.893 3 8 hm5C_associated_SNPs_41242 0 0 2 U2AF1 POSTAR2 ENCODE chr1:31905793-31905863
64251 chr21 42629161 42629161 1 + C T UCEC 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCCATCCACAAATGTGCTGGTGATCGGTGCCACGGTG < 41bp 1 0.528837126539526 1 0.191465586423874 experiment 0.942325746920949 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629161 nonsynonymous SNV 0.453 2 19 hm5C_associated_SNPs_41243 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr13 20567834 20567834 1 + C T UCEC 20567826 + 20567806 20567846 41 TGATGGCCAATTAGAAAATACTGACGGGCGAGATATGAACT TGATGGCCAATTAGAAAATACTGACGGGTGAGATATGAACT < 41bp 1 0.140016712015407 1 0.0785688161849976 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20567826 chr13:20567834 stopgain 0.889 1 29 hm5C_associated_SNPs_41244 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:20567777-20567845
64251 chr8 30332299 30332299 1 + G A UCEC 30332319 + 30332299 30332339 41 GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT AGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT < 41bp 1 0.0656647440709686 1 0.0508638620376587 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBPMS ENSG00000157110 CDS Human protein_coding chr8:30332319 chr8:30332299 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_41245 0 0 1 PPIG POSTAR2 ENCODE chr8:30332294-30332308
64251 chr1 12061532 12061532 1 + C T UCEC 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCCAGGCTGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA < 41bp 1 0.281834930464635 1 0.0981212854385376 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061532 synonymous SNV . 0 9 hm5C_associated_SNPs_41246 4 0 1 FXR2 POSTAR2 ENCODE chr1:12061494-12061561
64251 chr7 56119543 56119543 1 + T C UCEC 56119525 + 56119505 56119545 41 ACTCAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTATGG ACTCAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTACGG < 41bp 1 0.347840673418762 1 0.402285933494568 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119525 chr7:56119543 nonsynonymous SNV 0.739 4 39 hm5C_associated_SNPs_41247 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:56119480-56119560
64251 chr7 56119543 56119543 1 + T C UCEC 56119526 + 56119506 56119546 41 CTCAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTATGGC CTCAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTACGGC < 41bp 1 0.687782595782061 1 0.763629555702209 experiment 0.624434808435878 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119526 chr7:56119543 nonsynonymous SNV 0.739 4 38 hm5C_associated_SNPs_41248 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:56119480-56119560
64251 chr7 56119543 56119543 1 + T C UCEC 56119528 + 56119508 56119548 41 CAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTATGGCGG CAGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTACGGCGG < 41bp 1 0.614955253876764 1 0.250871062278748 experiment 0.770089492246472 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119528 chr7:56119543 nonsynonymous SNV 0.739 4 36 hm5C_associated_SNPs_41249 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:56119480-56119560
64251 chr7 56119543 56119543 1 + T C UCEC 56119529 + 56119509 56119549 41 AGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTATGGCGGC AGCATCGTTTCCTTTTCCTCCGCTGGAGCAGCTACGGCGGC < 41bp 1 0.586475235692021 1 0.763270497322083 experiment 0.827049528615958 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119529 chr7:56119543 nonsynonymous SNV 0.739 4 35 hm5C_associated_SNPs_41250 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:56119480-56119560
64251 chr7 56119543 56119543 1 + T C UCEC 56119537 + 56119517 56119557 41 TTCCTTTTCCTCCGCTGGAGCAGCTATGGCGGCGGTGAAGA TTCCTTTTCCTCCGCTGGAGCAGCTACGGCGGCGGTGAAGA < 41bp 1 0.536884468968477 1 0.377932459115982 experiment 0.926231062063046 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119537 chr7:56119543 nonsynonymous SNV 0.739 4 27 hm5C_associated_SNPs_41251 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:56119480-56119560
64251 chr6 42975949 42975949 1 + G A UCEC 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTACAAGACGGAGCATCACAACGGGATTGCTGAG < 41bp 1 0.236469920474474 1 0.0574996769428253 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975949 nonsynonymous SNV 0.992 4 12 hm5C_associated_SNPs_41252 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:42975932-42975953
64251 chr4 1955177 1955177 1 + G A UCEC 1955190 + 1955170 1955210 41 GAGAGCCGAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAG GAGAGCCAAGGTTTCCGCTGCCCCCTCCACAGCTGTGTGAG < 41bp 1 0.0727804842651651 1 0.135983973741531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NSD2 ENSG00000109685 CDS Human protein_coding chr4:1955190 chr4:1955177 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_41253 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:1955127-1955191
64251 chr12 4459024 4459024 1 + G T UCEC 4459031 + 4459011 4459051 41 CAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGAC CAAATTTTGCAAATATATGACGGTAAAGTATGACTCAAGAC < 41bp 1 0.427500255311257 1 0.386393964290619 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TIGAR ENSG00000078237 CDS Human protein_coding chr12:4459031 chr12:4459024 nonsynonymous SNV 0.954 2 14 hm5C_associated_SNPs_41254 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:4459024-4459049
64251 chr11 61404913 61404913 1 + G T UCEC 61404895 + 61404875 61404915 41 ATCGACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGAC ATCGACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGATAC < 41bp 1 0.261202753472797 1 0.0727493762969971 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404895 chr11:61404913 . . 0 39 hm5C_associated_SNPs_41255 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:61404903-61404930
64251 chr1 198231716 198231716 1 + A G UCEC 198231736 + 198231716 198231756 41 AATGGATGCCAAAGCACGTGCTGATTGCATCAAAGAAATAG GATGGATGCCAAAGCACGTGCTGATTGCATCAAAGAAATAG < 41bp 1 0.189965701308607 1 0.0756292343139648 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198231736 chr1:198231716 synonymous SNV . 0 1 hm5C_associated_SNPs_41256 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:198231714-198231716
64251 chr19 39125694 39125694 1 + C A UCEC 39125675 + 39125655 39125695 41 GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCT GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATAT < 41bp 1 0.252698963872881 1 0.430244505405426 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125675 chr19:39125694 synonymous SNV . 0 40 hm5C_associated_SNPs_41257 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr19 39125694 39125694 1 + C A UCEC 39125679 + 39125659 39125699 41 AAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCTTCAT AAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATATTCAT < 41bp 1 0.566069348541996 1 0.413999289274216 experiment 0.867861302916008 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125679 chr19:39125694 synonymous SNV . 0 36 hm5C_associated_SNPs_41258 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39125647-39125758
64251 chr17 7592187 7592187 1 + C A UCEC 7592180 + 7592160 7592200 41 AGGAGCTACGGGAGGGGGACCCAGTTTCTCTCTCCACTCCC AGGAGCTACGGGAGGGGGACCCAGTTTATCTCTCCACTCCC < 41bp 1 0.383599079047897 1 0.203872978687286 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592180 chr17:7592187 nonsynonymous SNV 0.008 1 28 hm5C_associated_SNPs_41259 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7592186-7592187
64251 chr20 60878633 60878633 1 + C A UCEC 60878643 + 60878623 60878663 41 GGATGACGACCTCAGGCGCGCTCTTTCCAAGCCTGGTGCCA GGATGACGACATCAGGCGCGCTCTTTCCAAGCCTGGTGCCA < 41bp 1 0.160183232048182 1 0.0168150663375854 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60878643 chr20:60878633 synonymous SNV . 0 11 hm5C_associated_SNPs_41260 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:60878630-60878652
64251 chr14 50088664 50088664 1 + A T UCEC 50088661 + 50088641 50088681 41 TTCGGCCATTATAGAGAGGCCAAATTCTCCCAGACCAAACA TTCGGCCATTATAGAGAGGCCAATTTCTCCCAGACCAAACA < 41bp 1 0.135085219404061 1 0.0543536841869354 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088661 chr14:50088664 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_41261 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:50088635-50088686
64251 chr17 43220922 43220922 1 + G A UCEC 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCGTCGTCCAGTGGCTCTTCCGAATGTTTCAGACCCAAAAG < 41bp 1 0.421707819983605 1 0.795809686183929 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220922 nonsynonymous SNV 0.996 2 31 hm5C_associated_SNPs_41262 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:43220920-43220940
64251 chr15 100215656 100215656 1 + T C UCEC 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGCC < 41bp 1 0.285660800535492 1 0.514192759990692 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215656 synonymous SNV . 0 40 hm5C_associated_SNPs_41263 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:100215626-100215659
64251 chr17 33324836 33324836 1 + C T UCEC 33324843 + 33324823 33324863 41 CTCAGAAATGAAGCGAGTCACAGTAAGTGAAGACCCTATGC CTCAGAAATGAAGTGAGTCACAGTAAGTGAAGACCCTATGC < 41bp 1 0.65121564654917 1 0.244450300931931 experiment 0.697568706901659 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33324843 chr17:33324836 stopgain 0.998 0 14 hm5C_associated_SNPs_41264 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:33324799-33324842
64251 chr19 30936078 30936078 1 + T G UCEC 30936065 + 30936045 30936085 41 CTCATGGCCAGGGGCATGGCCATGGAACATGGCTTCTTGTC CTCATGGCCAGGGGCATGGCCATGGAACATGGCGTCTTGTC < 41bp 1 0.338470603602678 1 0.699397265911102 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936065 chr19:30936078 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_41265 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:30936078-30936079
64251 chr6 44219798 44219798 1 + G A UCEC 44219794 + 44219774 44219814 41 GAGCGAGTGCGGAAACGGGGCTTCGAGGTGGTATATATGAC GAGCGAGTGCGGAAACGGGGCTTCAAGGTGGTATATATGAC < 41bp 1 0.352119918086531 1 0.280385553836823 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219794 chr6:44219798 nonsynonymous SNV 0.986 3 25 hm5C_associated_SNPs_41266 0 0 40 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44219735-44219800
64251 chr6 44219798 44219798 1 + G A UCEC 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCAAGGTGGTATATATGACCGAGCCCATTGACGAGTACT < 41bp 1 0.330260970136454 1 0.177519381046295 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219798 nonsynonymous SNV 0.986 3 5 hm5C_associated_SNPs_41267 0 0 40 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44219735-44219800
64251 chr12 104336865 104336865 1 + C A UCEC 104336862 + 104336842 104336882 41 AATTTTGTAGGCTGAATCTTCTCCATTTGTTGAGCGACTTC AATTTTGTAGGCTGAATCTTCTCAATTTGTTGAGCGACTTC < 41bp 1 0.683520820726733 1 0.668353915214539 experiment 0.632958358546533 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336862 chr12:104336865 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_41268 0 0 45 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:104336849-104336945
64251 chr17 17039737 17039737 1 + C T UCEC 17039743 + 17039723 17039763 41 CTGCCAGCTCCCTGCGGGAACCTGGGCTAGAGAGCAAAGAA CTGCCAGCTCCCTGTGGGAACCTGGGCTAGAGAGCAAAGAA < 41bp 1 0.181612811203069 1 0.311505675315857 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17039743 chr17:17039737 nonsynonymous SNV 0.312 2 15 hm5C_associated_SNPs_41269 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:17039720-17039740
64251 chr17 17039737 17039737 1 + C T UCEC 17039744 + 17039724 17039764 41 TGCCAGCTCCCTGCGGGAACCTGGGCTAGAGAGCAAAGAAG TGCCAGCTCCCTGTGGGAACCTGGGCTAGAGAGCAAAGAAG < 41bp 1 0.695316572762331 1 0.494005113840103 experiment 0.609366854475337 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17039744 chr17:17039737 nonsynonymous SNV 0.312 2 14 hm5C_associated_SNPs_41270 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:17039720-17039740
64251 chr17 17039737 17039737 1 + C T UCEC 17039749 + 17039729 17039769 41 GCTCCCTGCGGGAACCTGGGCTAGAGAGCAAAGAAGGTGAG GCTCCCTGTGGGAACCTGGGCTAGAGAGCAAAGAAGGTGAG < 41bp 1 0.701089044896101 1 0.301244080066681 experiment 0.597821910207798 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17039749 chr17:17039737 nonsynonymous SNV 0.312 2 9 hm5C_associated_SNPs_41271 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr17:17039720-17039740
64251 chr13 50589751 50589751 1 + A C UCEC 50589747 + 50589727 50589767 41 GCATGTTAGATGGCAGAGACCAAGAATTCAAGATGGTTGGT GCATGTTAGATGGCAGAGACCAAGCATTCAAGATGGTTGGT < 41bp 1 0.623997884537197 1 0.353767991065979 experiment 0.752004230925606 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KCNRG ENSG00000198553 CDS Human protein_coding chr13:50589747 chr13:50589751 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_41277 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr13:50589735-50589758
64251 chr2 118582185 118582185 1 + A G UCEC 118582181 + 118582161 118582201 41 GCTCTTTTCTGCCACCCAAACTCGAAAAGTTGAAGACCTGG GCTCTTTTCTGCCACCCAAACTCGGAAAGTTGAAGACCTGG < 41bp 1 0.783477585870173 1 0.263679981231689 experiment 0.433044828259654 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582181 chr2:118582185 synonymous SNV . 0 25 hm5C_associated_SNPs_41279 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:118582184-118582228
64251 chrX 102632726 102632726 1 + C T UCEC 102632708 + 102632688 102632728 41 TGCGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCAT TGCGTATCCTTATGGGGGAGCTCTCTAATCACCATGACTAT < 41bp 1 0.108854990034292 1 0.0420005917549133 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632708 chrX:102632726 nonsynonymous SNV 0.999 4 39 hm5C_associated_SNPs_41280 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632726 102632726 1 + C T UCEC 102632710 + 102632690 102632730 41 CGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCA CGTATCCTTATGGGGGAGCTCTCTAATCACCATGACTATCA < 41bp 1 0.731378592332062 1 0.19061154127121 experiment 0.537242815335876 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632710 chrX:102632726 nonsynonymous SNV 0.999 4 37 hm5C_associated_SNPs_41281 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632726 102632726 1 + C T UCEC 102632712 + 102632692 102632732 41 TATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCATG TATCCTTATGGGGGAGCTCTCTAATCACCATGACTATCATG < 41bp 1 0.441321058361203 1 0.143809586763382 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632712 chrX:102632726 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_41282 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632726 102632726 1 + C T UCEC 102632725 + 102632705 102632745 41 GAGCTCTCTAATCACCATGACCATCATGATGAATTTTGCCT GAGCTCTCTAATCACCATGACTATCATGATGAATTTTGCCT < 41bp 1 0.0618453701783138 1 0.0263440310955048 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632725 chrX:102632726 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_41283 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632726 102632726 1 + C T UCEC 102632743 + 102632723 102632763 41 GACCATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCC GACTATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCC < 41bp 1 0.149126485025972 1 0.0602016448974609 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632743 chrX:102632726 nonsynonymous SNV 0.999 4 4 hm5C_associated_SNPs_41284 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632726 102632726 1 + C T UCEC 102632744 + 102632724 102632764 41 ACCATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCCA ACTATCATGATGAATTTTGCCTTATGCCTTGACTCCTGCCA < 41bp 1 0.271761581698582 1 0.0539169013500214 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632744 chrX:102632726 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_41285 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr17 80680737 80680737 1 + T C UCEC 80680754 + 80680734 80680774 41 TGGTGACGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGG TGGCGACGTGCTGTGGATACCTCCCCCAGGTGAGTGCACGG < 41bp 1 0.451246361859002 1 0.781522035598755 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680754 chr17:80680737 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_41286 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80680730-80680765
64251 chr17 16344593 16344593 1 + G A UCEC 16344577 + 16344557 16344597 41 AAAATAGCTGGAATTACCGGCAGATTGTGTAGTGGTGAACC AAAATAGCTGGAATTACCGGCAGATTGTGTAGTGGTAAACC < 41bp 1 0.106967240400266 1 0.157600909471512 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD65 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344577 chr17:16344593 . . 0 37 hm5C_associated_SNPs_41287 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16344583-16344612
64251 chr17 16344593 16344593 1 + G A UCEC 16344596 + 16344576 16344616 41 GCAGATTGTGTAGTGGTGAACCTATGGTTTTCTGAAGATAT GCAGATTGTGTAGTGGTAAACCTATGGTTTTCTGAAGATAT < 41bp 1 0.0674834314831908 1 0.103003859519958 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD65 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344596 chr17:16344593 . . 0 18 hm5C_associated_SNPs_41288 0 0 108 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16344583-16344612
64251 chr6 139487483 139487483 1 + G A UCEC 139487463 + 139487443 139487483 41 GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACG GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACA < 41bp 1 0.543336704769794 1 0.482868522405624 experiment 0.913326590460411 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139487463 chr6:139487483 nonsynonymous SNV 0.996 3 41 hm5C_associated_SNPs_41289 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:139487462-139487500
64251 chr2 105959565 105959565 1 + A G UCEC 105959573 + 105959553 105959593 41 AACAGAACCATGACTTAACGCATAGGAAAAGTCCTTCAGGC AACAGAACCATGGCTTAACGCATAGGAAAAGTCCTTCAGGC < 41bp 1 0.552239191623012 1 0.709652364253998 experiment 0.895521616753977 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C2orf49 ENSG00000135974 CDS Human protein_coding chr2:105959573 chr2:105959565 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_41290 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:105959539-105959577
64251 chr2 200824532 200824532 1 + C T UCEC 200824514 + 200824494 200824534 41 AGAAAAGGTTACTTCACTACCTGACAACCATAAAAATGCCC AGAAAAGGTTACTTCACTACCTGACAACCATAAAAATGTCC < 41bp 1 0.181702443748579 1 0.129139274358749 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824514 chr2:200824532 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_41291 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:200824526-200824549
64251 chr8 1806227 1806227 1 + C T UCEC 1806226 + 1806206 1806246 41 CCAGAAGCGGACAGACAGGCCCCATCCGCCCCTGAGACAGG CCAGAAGCGGACAGACAGGCCTCATCCGCCCCTGAGACAGG < 41bp 1 0.247111093727706 1 0.17174556851387 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF10 ENSG00000104728 CDS Human protein_coding chr8:1806226 chr8:1806227 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_41292 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:1806210-1806231
64251 chrX 41089023 41089023 1 + T C UCEC 41089020 + 41089000 41089040 41 CTTGCAAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAA CTTGCAAAAGCTTGTGAACTCTGCCCAGAGGAGGTAAAAAA < 41bp 1 0.214906025332107 1 0.250676155090332 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089020 chrX:41089023 synonymous SNV . 0 24 hm5C_associated_SNPs_41293 0 0 1 CDC40 POSTAR2 ENCODE chrX:41088970-41089033
64251 chrX 41089023 41089023 1 + T C UCEC 41089025 + 41089005 41089045 41 AAAAGCTTGTGAACTCTGTCCAGAGGAGGTAAAAAAAGCCA AAAAGCTTGTGAACTCTGCCCAGAGGAGGTAAAAAAAGCCA < 41bp 1 0.216120056819434 1 0.667450547218323 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089025 chrX:41089023 synonymous SNV . 0 19 hm5C_associated_SNPs_41294 0 0 1 CDC40 POSTAR2 ENCODE chrX:41088970-41089033
64251 chrX 41089023 41089023 1 + T C UCEC 41089043 + 41089023 41089063 41 TCCAGAGGAGGTAAAAAAAGCCACCAGTGTGCAGCAGATAG CCCAGAGGAGGTAAAAAAAGCCACCAGTGTGCAGCAGATAG < 41bp 1 0.051657044568292 1 0.201132655143738 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41089043 chrX:41089023 synonymous SNV . 0 1 hm5C_associated_SNPs_41295 0 0 1 CDC40 POSTAR2 ENCODE chrX:41088970-41089033
64251 chr5 149754347 149754347 1 + G A UCEC 149754335 + 149754315 149754355 41 GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCAGACAGTGA < 41bp 1 0.526136720380274 1 0.416235089302063 experiment 0.947726559239451 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754335 chr5:149754347 synonymous SNV . 0 33 hm5C_associated_SNPs_41296 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr5:149754334-149754365
64251 chr11 44129598 44129598 1 + A G UCEC 44129604 + 44129584 44129624 41 ATCTATGCTCTGAAAAAGTACGTGGATGACTTTGGCGTCTC ATCTATGCTCTGAAGAAGTACGTGGATGACTTTGGCGTCTC < 41bp 1 0.519688784317556 1 0.531013786792755 experiment 0.960622431364888 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129604 chr11:44129598 synonymous SNV . 0 15 hm5C_associated_SNPs_41297 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:44129587-44129614
64251 chr5 142264926 142264926 1 + A G UCEC 142264910 + 142264890 142264930 41 ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGAATTT ACAGAAAAGTATTGTGGCATCTTAGAAAAACACTTGGATTT < 41bp 1 0.121049583421354 1 0.367004811763763 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARHGAP26 ENSG00000145819 CDS Human protein_coding chr5:142264910 chr5:142264926 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_41298 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:142264918-142264939
64251 chr15 66777517 66777517 1 + A C UCEC 66777521 + 66777501 66777541 41 GCCAAGGACCCCCGGGAGGCCCCTTAGCTGTGAGTAGCCTG GCCAAGGACCCCCGGGCGGCCCCTTAGCTGTGAGTAGCCTG < 41bp 1 0.148872945229317 1 0.0901764631271362 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66777521 chr15:66777517 synonymous SNV . 0 17 hm5C_associated_SNPs_41299 0 0 2 PRPF8 POSTAR2 ENCODE chr15:66777495-66777573
64251 chrX 129535956 129535956 1 + G A UCEC 129535973 + 129535953 129535993 41 TGCGCTGCCTTTCCCGGGCGCTGATTCCTGAGTGCTGAGCG TGCACTGCCTTTCCCGGGCGCTGATTCCTGAGTGCTGAGCG < 41bp 1 0.438686195820725 1 0.0304941833019257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBMX2 ENSG00000134597 UTR5 Human protein_coding chrX:129535973 chrX:129535956 . . 0 4 hm5C_associated_SNPs_41302 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chrX:129535951-129535982
64251 chr19 14512316 14512316 1 + G T UCEC 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATCATGATGATCCTGGCCAAGAGCCTGCCTAA < 41bp 1 0.340390762032707 1 0.0581580102443695 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512316 nonsynonymous SNV 0.001 3 17 hm5C_associated_SNPs_41303 0 0 1 SND1 POSTAR2 ENCODE chr19:14512310-14512376
64251 chr1 44069407 44069407 1 + G A UCEC 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACAAGGCGCGGCCCAACACCATAGATTTCGGCAA < 41bp 1 0.348887387511923 1 0.0584088563919067 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069407 nonsynonymous SNV 0.566 2 10 hm5C_associated_SNPs_41306 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:44069396-44069417
64251 chr17 30293214 30293214 1 + T C UCEC 30293195 + 30293175 30293215 41 TCATTTGCAGCTTACGTTTACTGGTTTCTTCCACAAAAATG TCATTTGCAGCTTACGTTTACTGGTTTCTTCCACAAAAACG < 41bp 1 0.501891665237136 1 0.189388364553452 experiment 0.996216669525727 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30293195 chr17:30293214 synonymous SNV . 0 40 hm5C_associated_SNPs_41309 0 0 7 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr17:30293190-30293215
64251 chr13 28197121 28197121 1 + G A UCEC 28197130 + 28197110 28197150 41 TTGTATTGCACGAGGAAGACCATACCCTAGGAAATTCTCTA TTGTATTGCACAAGGAAGACCATACCCTAGGAAATTCTCTA < 41bp 1 0.0284554348984222 1 0.188082575798035 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197130 chr13:28197121 nonsynonymous SNV 0.999 1 12 hm5C_associated_SNPs_41310 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:28197073-28197156
64251 chr19 50339133 50339133 1 + A G UCEC 50339146 + 50339126 50339166 41 CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC CTCCTGGGCCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC < 41bp 1 0.434045634102374 1 0.0663125514984131 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339146 chr19:50339133 synonymous SNV . 0 8 hm5C_associated_SNPs_41311 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339133 50339133 1 + A G UCEC 50339147 + 50339127 50339167 41 TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC TCCTGGGCCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC < 41bp 1 0.139019374416659 1 0.0320164263248444 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339147 chr19:50339133 synonymous SNV . 0 7 hm5C_associated_SNPs_41312 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339133 50339133 1 + A G UCEC 50339148 + 50339128 50339168 41 CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC CCTGGGCCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC < 41bp 1 0.418497596157918 1 0.0585717856884003 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339148 chr19:50339133 synonymous SNV . 0 6 hm5C_associated_SNPs_41313 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339133 50339133 1 + A G UCEC 50339149 + 50339129 50339169 41 CTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT CTGGGCCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT < 41bp 1 0.455824702025484 1 0.0963809490203857 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339149 chr19:50339133 synonymous SNV . 0 5 hm5C_associated_SNPs_41314 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr8 56866444 56866444 1 + C T UCEC 56866453 + 56866433 56866473 41 TTAGTCCCAAGCCACAGAAGCCATGGGATAAAGATGCCTGG TTAGTCCCAAGTCACAGAAGCCATGGGATAAAGATGCCTGG < 41bp 1 0.0966223545187516 1 0.379556357860565 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56866453 chr8:56866444 nonsynonymous SNV 0.983 2 12 hm5C_associated_SNPs_41315 0 0 1 GPKOW POSTAR2 ENCODE chr8:56866335-56866445
64251 chr3 52326914 52326914 1 + C T UCEC 52326903 + 52326883 52326923 41 CGCTGGGGCCGATAGATGTGCTGTTTTTGAGCGGTGGCACC CGCTGGGGCCGATAGATGTGCTGTTTTTGAGTGGTGGCACC < 41bp 1 0.321688886693841 1 0.307662963867188 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GLYCTK ENSG00000168237 CDS Human protein_coding chr3:52326903 chr3:52326914 synonymous SNV . 0 32 hm5C_associated_SNPs_41316 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:52326896-52326922
64251 chr22 42032182 42032182 1 + C A UCEC 42032200 + 42032180 42032220 41 TTCTATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAA TTATATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAA < 41bp 1 0.496292805420167 1 0.343502163887024 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032200 chr22:42032182 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_41317 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr22:42032120-42032195
64251 chr11 35684876 35684876 1 + G A UCEC 35684862 + 35684842 35684882 41 CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGG CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACAGAGAGG < 41bp 1 0.36373452286085 1 0.397938549518585 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684862 chr11:35684876 nonsynonymous SNV 0.001 1 35 hm5C_associated_SNPs_41318 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684876 35684876 1 + G A UCEC 35684863 + 35684843 35684883 41 CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGG CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACAGAGAGGG < 41bp 1 0.187142412554877 1 0.242300361394882 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684863 chr11:35684876 nonsynonymous SNV 0.001 1 34 hm5C_associated_SNPs_41319 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684876 35684876 1 + G A UCEC 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACAGAGAGGGG < 41bp 1 0.247431781463205 1 0.435609817504883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684876 nonsynonymous SNV 0.001 1 33 hm5C_associated_SNPs_41320 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684876 35684876 1 + G A UCEC 35684865 + 35684845 35684885 41 CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGG CGGCTCCCAGGCCTGGACCCCGCCAGCTGACAGAGAGGGGG < 41bp 1 0.793749035920857 1 0.788323044776917 experiment 0.412501928158286 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684865 chr11:35684876 nonsynonymous SNV 0.001 1 32 hm5C_associated_SNPs_41321 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 134014868 134014868 1 + A G UCEC 134014879 + 134014859 134014899 41 TTTCCACTTAAACTCTGAAACAGGCACTTTGGTAAGATCTC TTTCCACTTGAACTCTGAAACAGGCACTTTGGTAAGATCTC < 41bp 1 0.415468779690164 1 0.712385892868042 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control JAM3 ENSG00000166086 CDS Human protein_coding chr11:134014879 chr11:134014868 synonymous SNV . 0 10 hm5C_associated_SNPs_41322 0 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:134014833-134014873
64251 chr2 241514992 241514992 1 + C T UCEC 241514997 + 241514977 241515017 41 TCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC TCCTGAGCTTCTTCCTGGAGCTGAAGGAGCAGAGCGTGGAC < 41bp 1 0.60996772462541 1 0.271427154541016 experiment 0.78006455074918 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514997 chr2:241514992 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_41324 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr13 52604988 52604988 1 + T C UCEC 52604970 + 52604950 52604990 41 GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGTGC GAAGCGCAACATCCACGCAGCAGCTCATCAGGTACAAGCGC < 41bp 1 0.182568703847924 1 0.0965416133403778 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UTP14C ENSG00000253797 CDS Human protein_coding chr13:52604970 chr13:52604988 nonsynonymous SNV 0.182 0 39 hm5C_associated_SNPs_41325 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:52604980-52605000
64251 chr6 18213975 18213975 1 + G A UCEC 18213957 + 18213937 18213977 41 TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCAAG < 41bp 1 0.415325964297911 1 0.201159179210663 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213957 chr6:18213975 nonsynonymous SNV 0.962 4 39 hm5C_associated_SNPs_41326 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr6 18213975 18213975 1 + G A UCEC 18213959 + 18213939 18213979 41 ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCAAGGG < 41bp 1 0.468719448527127 1 0.464764595031738 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213959 chr6:18213975 nonsynonymous SNV 0.962 4 37 hm5C_associated_SNPs_41327 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr19 13010538 13010538 1 + G T UCEC 13010519 + 13010499 13010539 41 ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAAGA ATTTCCCTTCTGAAGTCGTTCAGATGTGTTCCTTAAAAATA < 41bp 1 0.37374012565064 1 0.246356666088104 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13010519 chr19:13010538 nonsynonymous SNV . 0 40 hm5C_associated_SNPs_41328 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13010533-13010569
64251 chr19 36370321 36370321 1 + G A UCEC 36370340 + 36370320 36370360 41 CGCTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC CACTTCCTGGAGGAACGACCCTGACCCGGCCCCCTTCACCC < 41bp 1 0.411141401091536 1 0.0544670820236206 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APLP1 ENSG00000105290 CDS Human protein_coding chr19:36370340 chr19:36370321 nonsynonymous SNV 1.000 5 2 hm5C_associated_SNPs_41330 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36370316-36370342
64251 chr1 224553684 224553684 1 + A G UCEC 224553676 + 224553656 224553696 41 CTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGGTG CTTCTCAACTTACCTGTTGCCACTTGGAGTATATATCGGTG < 41bp 1 0.30708328000775 1 0.347925245761871 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CNIH4 ENSG00000143771 CDS Human protein_coding chr1:224553676 chr1:224553684 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_41331 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:224553593-224553685
64251 chr3 41266527 41266527 1 + G A UCEC 41266530 + 41266510 41266550 41 TTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGC TTAGATGAGGGCATGCAAATCCCATCTACACAGTTTGATGC < 41bp 1 0.378067541350482 1 0.25400584936142 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266530 chr3:41266527 synonymous SNV . 0 18 hm5C_associated_SNPs_41347 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41266463-41266695
64251 chr7 6057468 6057468 1 + C T UCEC 6057450 + 6057430 6057470 41 TTGGTCTTTCCCCAGGATTACGGGGCGCTGAAAGACATCGT TTGGTCTTTCCCCAGGATTACGGGGCGCTGAAAGACATTGT < 41bp 1 0.783805805082446 1 0.796723008155823 experiment 0.432388389835108 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057450 chr7:6057468 synonymous SNV . 0 39 hm5C_associated_SNPs_41348 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6057445-6057469
64251 chr3 183855521 183855521 1 + G A UCEC 183855522 + 183855502 183855542 41 GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA GATGCCAAGGCTTTGGTGCACTCTGACTTTCTTCTGGTGTA < 41bp 1 0.445236541271422 1 0.086987316608429 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183855522 chr3:183855521 nonsynonymous SNV 1.000 2 20 hm5C_associated_SNPs_41349 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:183855516-183855537
64251 chr1 231114969 231114969 1 + G A UCEC 231114974 + 231114954 231114994 41 ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCGAGACTA ATCGAATGCAACCAGAAGGCCAAAGAGTTGTACCGAGACTA < 41bp 1 0.616214226451536 1 0.26904571056366 experiment 0.767571547096928 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARV1 ENSG00000173409 CDS Human protein_coding chr1:231114974 chr1:231114969 nonsynonymous SNV 0.996 1 16 hm5C_associated_SNPs_41350 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:231114958-231114985
64251 chr20 62305430 62305430 1 + G A UCEC 62305411 + 62305391 62305431 41 GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCAG < 41bp 1 0.0937571369501516 1 0.236219674348831 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305411 chr20:62305430 synonymous SNV . 0 40 hm5C_associated_SNPs_41351 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chr20 62305430 62305430 1 + G A UCEC 62305412 + 62305392 62305432 41 GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCAGA < 41bp 1 0.106646515103826 1 0.0744684636592865 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305412 chr20:62305430 synonymous SNV . 0 39 hm5C_associated_SNPs_41352 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chr20 62305430 62305430 1 + G A UCEC 62305417 + 62305397 62305437 41 GCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGACTCCC GCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCAGACTCCC < 41bp 1 0.786428932936108 1 0.85981023311615 experiment 0.427142134127784 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305417 chr20:62305430 synonymous SNV . 0 34 hm5C_associated_SNPs_41353 0 0 6 BUD13 POSTAR2 ENCODE chr20:62305423-62305442
64251 chr12 53663756 53663756 1 + C A UCEC 53663747 + 53663727 53663767 41 GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCTG GGGCATTGTATGAGAGCTGCCAGTTCTTCATTTCAGGCCTG < 41bp 1 0.18668966383879 1 0.296596586704254 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663747 chr12:53663756 nonsynonymous SNV 0.987 0 30 hm5C_associated_SNPs_41355 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:53663720-53663760
64251 chr2 24888646 24888646 1 + A C UCEC 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAACATAAATA < 41bp 1 0.358626329072736 1 0.674253344535828 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888646 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_41356 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:24888629-24888650
64251 chrX 110954923 110954923 1 + G T UCEC 110954916 + 110954896 110954936 41 TTTGAAGTATGTGGAGGGATCTTTTGAGAAATACCTGGAAC TTTGAAGTATGTGGAGGGATCTTTTGATAAATACCTGGAAC < 41bp 1 0.152410312619914 1 0.0985323488712311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110954916 chrX:110954923 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_41357 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:110954857-110954923
64251 chr17 38991257 38991257 1 + G A UCEC 38991250 + 38991230 38991270 41 CTCAGCTCAGCAATCTCATGCCGGTTGGCAATTGTCAGCAG CTCAGCTCAGCAATCTCATGCCGGTTGACAATTGTCAGCAG < 41bp 1 0.616677066123014 1 0.390873730182648 experiment 0.766645867753972 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38991250 chr17:38991257 stopgain 0.001 0 28 hm5C_associated_SNPs_41358 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:38991253-38991276
64251 chr5 179151724 179151724 1 + G T UCEC 179151704 + 179151684 179151724 41 GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAG GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAT < 41bp 1 0.50220718642122 1 0.699438214302063 experiment 0.99558562715756 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151704 chr5:179151724 stopgain 0.998 0 41 hm5C_associated_SNPs_41360 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179151655-179151724
64251 chr13 77661714 77661714 1 - G T UCEC 77661728 - 77661708 77661748 41 TAATGTCATCCAAACCACTTCTCTCCATGATATTCTGTGGC TAATGTCATCCAAACCACTTCTCTCCATGATATTATGTGGC < 41bp 1 0.0247054973703248 1 0.519282281398773 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MYCBP2 ENSG00000005810 CDS Human protein_coding chr13:77661728 chr13:77661714 nonsynonymous SNV 0.997 3 35 hm5C_associated_SNPs_41369 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:77661699-77661726
64251 chr17 38152550 38152550 1 + C T UCEC 38152535 + 38152515 38152555 41 ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGTGCATC < 41bp 1 0.301626372223051 1 0.250767350196838 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38152535 chr17:38152550 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_41370 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr17:38152526-38152568
64251 chr2 114709399 114709399 1 + G T UCEC 114709379 + 114709359 114709399 41 TTTGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGG TTTGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGT < 41bp 1 0.623994821831934 1 0.200646549463272 experiment 0.752010356336133 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114709379 chr2:114709399 stopgain 0.997 1 41 hm5C_associated_SNPs_41371 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr2:114709297-114709422
64251 chr2 114709399 114709399 1 + G T UCEC 114709380 + 114709360 114709400 41 TTGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGGA TTGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGTA < 41bp 1 0.349051606833142 1 0.274563610553741 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114709380 chr2:114709399 stopgain 0.997 1 40 hm5C_associated_SNPs_41372 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr2:114709297-114709422
64251 chr2 114709399 114709399 1 + G T UCEC 114709381 + 114709361 114709401 41 TGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGGAA TGAAAAGAACTGTAGATGCCCGGCTGAAATTAAGTGAGTAA < 41bp 1 0.544791381029743 1 0.396089136600494 experiment 0.910417237940514 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114709381 chr2:114709399 stopgain 0.997 1 39 hm5C_associated_SNPs_41373 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr2:114709297-114709422
64251 chr19 50339177 50339177 1 + G A UCEC 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCAAAGCC < 41bp 1 0.0155450457367539 1 0.0502949059009552 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339177 nonsynonymous SNV 0.992 2 36 hm5C_associated_SNPs_41374 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339177 50339177 1 + G A UCEC 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCAAAGCCT < 41bp 1 0.100830790574552 1 0.0419811308383942 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339177 nonsynonymous SNV 0.992 2 35 hm5C_associated_SNPs_41375 0 0 2 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr12 109961890 109961890 1 + C T UCEC 109961906 + 109961886 109961926 41 ACTCCGAGTTCTATAAAAACCTCACCTCCATCAAGGTGAGC ACTCTGAGTTCTATAAAAACCTCACCTCCATCAAGGTGAGC < 41bp 1 0.222371315291148 1 0.0417645871639252 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE3B ENSG00000151148 CDS Human protein_coding chr12:109961906 chr12:109961890 synonymous SNV . 0 5 hm5C_associated_SNPs_41380 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:109961862-109961900
64251 chr13 53039495 53039495 1 + A G UCEC 53039491 + 53039471 53039511 41 GATTAAAAATATTCCAGATGCCAAAAAGCTTGTTAAGTATT GATTAAAAATATTCCAGATGCCAAGAAGCTTGTTAAGTATT < 41bp 1 0.131142184461404 1 0.0875152349472046 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53039491 chr13:53039495 synonymous SNV . 0 25 hm5C_associated_SNPs_41381 0 0 14 ZC3H7B POSTAR2 GSE38201,GSM936510 chr13:53039420-53039498
64251 chr1 24022328 24022328 1 + G A UCEC 24022327 + 24022307 24022347 41 TCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGG TCAGCATCGCAGACAAGAAGCACAGGACAGGCTGCATTGGG < 41bp 1 0.744035701930963 1 0.520738363265991 experiment 0.511928596138075 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022327 chr1:24022328 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_41382 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:24022108-24022375
64251 chrX 24483647 24483647 1 + G A UCEC 24483663 + 24483643 24483683 41 CGTCGCCGCTCTCCATCAAACAATTCCTGGACTTCGGTGAG CGTCACCGCTCTCCATCAAACAATTCCTGGACTTCGGTGAG < 41bp 1 0.201533774077105 1 0.249026954174042 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PDK3 ENSG00000067992 CDS Human protein_coding chrX:24483663 chrX:24483647 synonymous SNV . 0 5 hm5C_associated_SNPs_41383 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chrX:24483627-24483655
64251 chr12 104325333 104325333 1 + T G UCEC 104325338 + 104325318 104325358 41 TGAAGTTGATGTGGATGGTACAGTAGAAGAGGATCTGGGTA TGAAGTTGATGTGGAGGGTACAGTAGAAGAGGATCTGGGTA < 41bp 1 0.686674843958808 1 0.323142290115356 experiment 0.626650312082384 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104325338 chr12:104325333 nonsynonymous SNV 1.000 0 16 hm5C_associated_SNPs_41384 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:104325300-104325340
64251 chr3 9775909 9775909 1 + C T UCEC 9775905 + 9775885 9775925 41 TACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAG TACGAGTGCCCGGTGGAGACCTGCTGAAAGGTCTACAAGAG < 41bp 1 0.497066249459025 1 0.315573900938034 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775905 chr3:9775909 stopgain 1.000 1 25 hm5C_associated_SNPs_41385 0 0 1 ZNF622 POSTAR2 ENCODE chr3:9775830-9775920
64251 chr7 4002354 4002354 1 + C T UCEC 4002345 + 4002325 4002365 41 CCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTG CCATCTCCATCAGCAGGCTCCAGAATCCTTGATACAAAGTG < 41bp 1 0.183745146685236 1 0.344102650880814 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SDK1 ENSG00000146555 CDS Human protein_coding chr7:4002345 chr7:4002354 stopgain 0.581 1 30 hm5C_associated_SNPs_41386 0 0 1 GRWD1 POSTAR2 ENCODE chr7:4002303-4002476
64251 chr7 128478852 128478852 1 + C T UCEC 128478838 + 128478818 128478858 41 CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTCGGAAGG CCCATCACCCGCAGTCCCTTCCCTGTCCATGTGTTGGAAGG < 41bp 1 0.0606853698806197 1 0.0632371604442596 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNC ENSG00000128591 CDS Human protein_coding chr7:128478838 chr7:128478852 nonsynonymous SNV 0.946 0 35 hm5C_associated_SNPs_41388 0 0 1 SF3B4 POSTAR2 ENCODE chr7:128478850-128478893
64251 chr3 9859436 9859436 1 + C A UCEC 9859427 + 9859407 9859447 41 TGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGGTAA TGCCTGGGGGCTGAGGATGACAAAAAAGCATTCATAGGTAA < 41bp 1 0.584932425096586 1 0.504622459411621 experiment 0.830135149806829 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9859427 chr3:9859436 synonymous SNV . 0 30 hm5C_associated_SNPs_41389 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:9859420-9859440
64251 chr1 109804153 109804153 1 + C T UCEC 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTGCCACAAAGGAGCGTGACGGGTTGCTGTTGTACAATGG < 41bp 1 0.340505896954964 1 0.231809020042419 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804153 synonymous SNV . 0 18 hm5C_associated_SNPs_41390 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr19 7584362 7584362 1 + G A UCEC 7584367 + 7584347 7584387 41 CGACGCCGAAGCTCCGGGCTCGGAACCCCAAGATCCCGACC CGACGCCGAAGCTCCAGGCTCGGAACCCCAAGATCCCGACC < 41bp 1 0.668246469074859 1 0.626158475875854 experiment 0.663507061850282 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584367 chr19:7584362 synonymous SNV . 0 16 hm5C_associated_SNPs_41391 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:7584336-7584362
64251 chr2 32897401 32897401 1 + C T UCEC 32897396 + 32897376 32897416 41 TAAAGTTAGCAGATTGTGAACAGTTCCAGATGCCGGATCTG TAAAGTTAGCAGATTGTGAACAGTTTCAGATGCCGGATCTG < 41bp 1 0.242891408672043 1 0.0853863954544067 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC27 ENSG00000018699 CDS Human protein_coding chr2:32897396 chr2:32897401 synonymous SNV . 0 26 hm5C_associated_SNPs_41392 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32897348-32897444
64251 chr12 69966005 69966005 1 + C T UCEC 69966003 + 69965983 69966023 41 ACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGG ACATCCTTCTGTGGGAAGTGCTTGCCTGCCTTCAGTAGGGG < 41bp 1 0.208579790843639 1 0.111084789037704 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FRS2 ENSG00000166225 CDS Human protein_coding chr12:69966003 chr12:69966005 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_41394 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:69965984-69966006
64251 chr15 41192215 41192215 1 + G A UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCACACCTA < 41bp 1 0.318731100090296 1 0.498149693012238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192215 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_41395 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr15 41192215 41192215 1 + G A UCEC 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCACACCTAT < 41bp 1 0.744495610115247 1 0.842730402946472 experiment 0.511008779769506 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192215 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_41396 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr3 50131276 50131276 1 + C T UCEC 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCATGCTGTGCGGCCTTCCCAT < 41bp 1 0.427609847099502 1 0.363150864839554 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131276 nonsynonymous SNV 0.988 4 28 hm5C_associated_SNPs_41398 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50131200-50131280
64251 chr2 113315624 113315624 1 + C T UCEC 113315643 + 113315623 113315663 41 ACCTTTTTGCTACTGGGAATCTGCGTTCTAAAACAGGTAAA ATCTTTTTGCTACTGGGAATCTGCGTTCTAAAACAGGTAAA < 41bp 1 0.524870526416117 1 0.768506169319153 experiment 0.950258947167766 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113315643 chr2:113315624 synonymous SNV . 0 2 hm5C_associated_SNPs_41399 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:113315619-113315650
64251 chr17 4685828 4685828 1 + G A UCEC 4685815 + 4685795 4685835 41 CAGATGCTGCGCTCGGTCTTCTCCTCGGCGTTCGGGGTGCT CAGATGCTGCGCTCGGTCTTCTCCTCGGCGTTCAGGGTGCT < 41bp 1 0.368669892900445 1 0.436198323965073 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4685815 chr17:4685828 nonsynonymous SNV 0.993 3 34 hm5C_associated_SNPs_41400 0 0 2 RPS3 POSTAR2 ENCODE chr17:4685819-4685857
64251 chr2 32631582 32631582 1 + G T UCEC 32631577 + 32631557 32631597 41 TTGATTTAAGTGATGATTTACTGGAGGATTCAGACAGTGAA TTGATTTAAGTGATGATTTACTGGATGATTCAGACAGTGAA < 41bp 1 0.304471355604928 1 0.678566098213196 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32631577 chr2:32631582 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_41401 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:32631565-32631591
64251 chr11 35201856 35201856 1 + G A UCEC 35201875 + 35201855 35201895 41 CGGATCCACCCCAACTCCATCTGTGCAGCAAACAACACAGG CAGATCCACCCCAACTCCATCTGTGCAGCAAACAACACAGG < 41bp 1 0.319509711945727 1 0.463130205869675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35201875 chr11:35201856 nonsynonymous SNV 0.577 4 2 hm5C_associated_SNPs_41402 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409655 chr11:35201840-35201860
64251 chrX 47101579 47101579 1 + C T UCEC 47101578 + 47101558 47101598 41 CAAGTCCACGCTGGTGTGCCCCGATTGTGGCAATGTATCTG CAAGTCCACGCTGGTGTGCCCTGATTGTGGCAATGTATCTG < 41bp 1 0.315759006393415 1 0.0622163414955139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47101578 chrX:47101579 synonymous SNV . 0 22 hm5C_associated_SNPs_41403 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47101559-47101588
64251 chr3 49728616 49728616 1 + C T UCEC 49728615 + 49728595 49728635 41 AAGGATGGCATCCAAGGGGGCCGGCATGTCTTTCTCCCGCA AAGGATGGCATCCAAGGGGGCTGGCATGTCTTTCTCCCGCA < 41bp 1 0.317792547706886 1 0.363150089979172 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49728615 chr3:49728616 synonymous SNV . 0 22 hm5C_associated_SNPs_41404 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:49728594-49728633
64251 chr15 31197918 31197918 1 + T C UCEC 31197933 + 31197913 31197953 41 TGATATCCCTCACAGCATTCCTTTGGAGCAGGGGTCAAGCT TGATACCCCTCACAGCATTCCTTTGGAGCAGGGGTCAAGCT < 41bp 1 0.29322110742723 1 0.105258017778397 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31197933 chr15:31197918 nonsynonymous SNV 0.000 0 6 hm5C_associated_SNPs_41405 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:31197906-31197932
64251 chr17 55191847 55191847 1 + G A UCEC 55191830 + 55191810 55191850 41 CCCTCTACAGCTCATGCTGCCTGATGGCATCACCGTGGAGG CCCTCTACAGCTCATGCTGCCTGATGGCATCACCGTGAAGG < 41bp 1 0.255374359786748 1 0.0868304967880249 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AKAP1 ENSG00000121057 CDS Human protein_coding chr17:55191830 chr17:55191847 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_41407 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:55191844-55191870
64251 chr1 231114993 231114993 1 + T C UCEC 231114974 + 231114954 231114994 41 ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCGAGACTA ATCGAATGCAACCAGGAGGCCAAAGAGTTGTACCGAGACCA < 41bp 1 0.619558993260151 1 0.445395410060883 experiment 0.760882013479699 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARV1 ENSG00000173409 CDS Human protein_coding chr1:231114974 chr1:231114993 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_41408 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:231114958-231115020
64251 chr7 23235490 23235490 1 + C T UCEC 23235473 + 23235453 23235493 41 TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGCTTG TTCAGGTTTTACAGACATTTCACCAGAGGAATTGAGGTTTG < 41bp 1 0.717759075703268 1 0.492840260267258 experiment 0.564481848593463 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23235473 chr7:23235490 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_41413 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:23235463-23235520
64251 chrX 12838853 12838853 1 + C A UCEC 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCGCATTTGAGGCTGTTGTCGTCACAAACACAA < 41bp 1 0.288677130995295 1 0.0640494227409363 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838853 synonymous SNV . 0 13 hm5C_associated_SNPs_41414 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:12838827-12838863
64251 chr12 53663545 53663545 1 + C T UCEC 53663559 + 53663539 53663579 41 CATCAGCGCAGTGGAGAAGGCTCACAGTTACCTAAGGAACA CATCAGTGCAGTGGAGAAGGCTCACAGTTACCTAAGGAACA < 41bp 1 0.243649854474331 1 0.0417483448982239 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663559 chr12:53663545 synonymous SNV . 0 7 hm5C_associated_SNPs_41417 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53663542-53663571
64251 chr1 109803862 109803862 1 + G A UCEC 109803866 + 109803846 109803886 41 CGCGGCCTGCGCCAGCGTTTCCACTTCACCCTGGCCCTCTC CGCGGCCTGCGCCAGCATTTCCACTTCACCCTGGCCCTCTC < 41bp 1 0.182697610232211 1 0.177073895931244 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109803866 chr1:109803862 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_41418 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:109803861-109803862
64251 chrX 135106623 135106623 1 + C A UCEC 135106613 + 135106593 135106633 41 TGGGTATTTGGTGGTGGCACCACTGCAATGCTGTCATGCTT TGGGTATTTGGTGGTGGCACCACTGCAATGATGTCATGCTT < 41bp 1 0.312932712501633 1 0.590934574604034 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135106613 chrX:135106623 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_41419 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135106597-135106625
64251 chr11 45882558 45882558 1 + C T UCEC 45882565 + 45882545 45882585 41 ACGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGT ACGACGAGACCTATGGCGTGCCCTCCCTGGAGGAGCTGGGT < 41bp 1 0.0255518805751325 1 0.0464514493942261 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882565 chr11:45882558 synonymous SNV . 0 14 hm5C_associated_SNPs_41421 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr11 45882558 45882558 1 + C T UCEC 45882566 + 45882546 45882586 41 CGACGAGACCTACGGCGTGCCCTCCCTGGAGGAGCTGGGTG CGACGAGACCTATGGCGTGCCCTCCCTGGAGGAGCTGGGTG < 41bp 1 0.044328189614818 1 0.0429269373416901 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45882566 chr11:45882558 synonymous SNV . 0 13 hm5C_associated_SNPs_41422 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:45882552-45882573
64251 chr10 105203013 105203013 1 + C T UCEC 105203022 + 105203002 105203042 41 AGGTCTTTGAGCGAGCCGTGCAGTACAACGAGCCTCTCAAA AGGTCTTTGAGTGAGCCGTGCAGTACAACGAGCCTCTCAAA < 41bp 1 0.226716690806094 1 0.757209062576294 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203022 chr10:105203013 stopgain 0.968 1 12 hm5C_associated_SNPs_41423 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:105203001-105203025
64251 chr11 67354012 67354012 1 + C T UCEC 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTATGTGAACC < 41bp 1 0.016433099903584 1 0.0901463627815247 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67354012 synonymous SNV . 0 34 hm5C_associated_SNPs_41424 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr11 67354012 67354012 1 + C T UCEC 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTATGTGAACCT < 41bp 1 0.238184510035131 1 0.165695309638977 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67354012 synonymous SNV . 0 33 hm5C_associated_SNPs_41425 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:67353956-67354013
64251 chr9 33912025 33912025 1 + C T UCEC 33912033 + 33912013 33912053 41 CCCAGCCAATGTCGATGCTTCAGTTATGTTCAGGAAATGGA CCCAGCCAATGTTGATGCTTCAGTTATGTTCAGGAAATGGA < 41bp 1 0.145484394877676 1 0.0540899038314819 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE2R2 ENSG00000107341 CDS Human protein_coding chr9:33912033 chr9:33912025 synonymous SNV . 0 13 hm5C_associated_SNPs_41426 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:33911998-33912026
64251 chr1 156106048 156106048 1 + C T UCEC 156106055 + 156106035 156106075 41 GCGCAGCCGTGGCCGTGCTTCCTCTCACTCATCCCAGACAC GCGCAGCCGTGGCTGTGCTTCCTCTCACTCATCCCAGACAC < 41bp 1 0.200531257245635 1 0.051869809627533 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156106055 chr1:156106048 nonsynonymous SNV 0.996 5 14 hm5C_associated_SNPs_41427 4 0 8 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:156106046-156106071
64251 chr1 160325697 160325697 1 + G A UCEC 160325712 + 160325692 160325732 41 TATGAGCTTGCAGGAGGAACCAACTTCAGCGACACAGTTCA TATGAACTTGCAGGAGGAACCAACTTCAGCGACACAGTTCA < 41bp 1 0.553502634349386 1 0.260097920894623 experiment 0.892994731301228 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160325712 chr1:160325697 synonymous SNV . 0 6 hm5C_associated_SNPs_41428 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:160325672-160325701
64251 chr1 44436751 44436751 1 + G A UCEC 44436760 + 44436740 44436780 41 CTTCGTGCTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTG CTTCGTGCTTCATCAACGTTCTGTGGCCTTGGAGCTCTGTG < 41bp 1 0.376933136330835 1 0.0847961604595184 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436760 chr1:44436751 nonsynonymous SNV 0.013 2 12 hm5C_associated_SNPs_41431 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44436739-44436777
64251 chr20 42089372 42089372 1 + G A UCEC 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACATTCTCG < 41bp 1 0.435126834560868 1 0.33639520406723 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089372 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_41432 0 0 9 EFTUD2 POSTAR2 ENCODE chr20:42089287-42089372
64251 chrX 70514356 70514356 1 + G T UCEC 70514364 + 70514344 70514384 41 GACAGATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT GACAGATGCAGTTAAGGCTCCTTCCTGCTAACCACGTAAGT < 41bp 1 0.0800038804718592 1 0.131863981485367 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70514364 chrX:70514356 stopgain 1.000 1 13 hm5C_associated_SNPs_41434 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70514338-70514359
64251 chr20 42249520 42249520 1 + G A UCEC 42249532 + 42249512 42249552 41 TGGCTCACGACAGGAGACATCCACCTAAACCAGATTGATGC TGGCTCACAACAGGAGACATCCACCTAAACCAGATTGATGC < 41bp 1 0.105870875401969 1 0.0426966547966003 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT52 ENSG00000101052 CDS Human protein_coding chr20:42249532 chr20:42249520 synonymous SNV . 0 9 hm5C_associated_SNPs_41435 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42249500-42249524
64251 chr1 9416617 9416617 1 + C T UCEC 9416605 + 9416585 9416625 41 TAGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGAATGCGC TAGTGAGTGCCGTCTGGGGCCACTGTGAGATCTGAATGCGC < 41bp 1 0.245855574609914 1 0.177952021360397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416605 chr1:9416617 stopgain 1.000 1 33 hm5C_associated_SNPs_41436 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9416603-9416630
64251 chr9 71861612 71861612 1 + T C UCEC 71861613 + 71861593 71861633 41 TATATTTCTATAGCTACAATCAACCTAAATTCAGCCAATGA TATATTTCTATAGCTACAACCAACCTAAATTCAGCCAATGA < 41bp 1 0.0541210612203172 1 0.409460991621017 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71861613 chr9:71861612 nonsynonymous SNV 0.996 4 20 hm5C_associated_SNPs_41438 0 0 3 RPS3 POSTAR2 ENCODE chr9:71861605-71861640
64251 chr11 71191890 71191890 1 + C T UCEC 71191878 + 71191858 71191898 41 GAGGACTTGCTGGCACCCATCTCTGAGCCCATCGAGTGGAA GAGGACTTGCTGGCACCCATCTCTGAGCCCATTGAGTGGAA < 41bp 1 0.49368469943147 1 0.876479625701904 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71191878 chr11:71191890 synonymous SNV . 0 33 hm5C_associated_SNPs_41439 0 0 7 BUD13 POSTAR2 ENCODE chr11:71191841-71191930
64251 chr1 26136289 26136289 1 + C T UCEC 26136269 + 26136249 26136289 41 CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCC CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCT < 41bp 1 0.0353406484448395 1 0.153440713882446 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136269 chr1:26136289 nonsynonymous SNV 0.995 3 41 hm5C_associated_SNPs_41441 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136289 26136289 1 + C T UCEC 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCTG < 41bp 1 0.139224707766982 1 0.0417031049728394 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136289 nonsynonymous SNV 0.995 3 40 hm5C_associated_SNPs_41442 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136289 26136289 1 + C T UCEC 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCTGGCT < 41bp 1 0.097958878545415 1 0.0700403451919556 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136289 nonsynonymous SNV 0.995 3 37 hm5C_associated_SNPs_41443 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136289 26136289 1 + C T UCEC 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCTGGCTC < 41bp 1 0.468617106620211 1 0.0512657761573792 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136289 nonsynonymous SNV 0.995 3 36 hm5C_associated_SNPs_41444 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chrX 70516825 70516825 1 + G T UCEC 70516812 + 70516792 70516832 41 CAGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCG CAGCAGCAGGACCAAGTGGACCGCAACATCAAGTAGGCTCG < 41bp 1 0.593507658007001 1 0.386473745107651 experiment 0.812984683985999 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516812 chrX:70516825 stopgain 1.000 1 34 hm5C_associated_SNPs_41445 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516825 70516825 1 + G T UCEC 70516813 + 70516793 70516833 41 AGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCGT AGCAGCAGGACCAAGTGGACCGCAACATCAAGTAGGCTCGT < 41bp 1 0.721933426091039 1 0.473346680402756 experiment 0.556133147817921 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516813 chrX:70516825 stopgain 1.000 1 33 hm5C_associated_SNPs_41446 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516825 70516825 1 + G T UCEC 70516821 + 70516801 70516841 41 GACCAAGTGGACCGCAACATCAAGGAGGCTCGTGAGAAGCT GACCAAGTGGACCGCAACATCAAGTAGGCTCGTGAGAAGCT < 41bp 1 0.701208584228641 1 0.29113182425499 experiment 0.597582831542718 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70516821 chrX:70516825 stopgain 1.000 1 25 hm5C_associated_SNPs_41447 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516825 70516825 1 + G T UCEC 70516829 + 70516809 70516849 41 GGACCGCAACATCAAGGAGGCTCGTGAGAAGCTGGAGATGG GGACCGCAACATCAAGTAGGCTCGTGAGAAGCTGGAGATGG < 41bp 1 0.631761390828009 1 0.0854798257350922 experiment 0.736477218343981 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70516829 chrX:70516825 stopgain 1.000 1 17 hm5C_associated_SNPs_41448 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chr7 56136261 56136261 1 + G T UCEC 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CCAGACAGCAGAGATGGTGACTGGCCTGTGCGGGAGGCGAC < 41bp 1 0.543485870567988 1 0.102236539125443 experiment 0.913028258864023 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136261 nonsynonymous SNV 0.928 5 22 hm5C_associated_SNPs_41449 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr7:56136249-56136270
64251 chr6 4935807 4935807 1 + T C UCEC 4935806 + 4935786 4935826 41 GACAACCAACATACAGACATCTGTTACAGGAGTGACTGCCA GACAACCAACATACAGACATCCGTTACAGGAGTGACTGCCA < 41bp 1 0.0629248607670492 1 0.133709281682968 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935806 chr6:4935807 synonymous SNV . 0 22 hm5C_associated_SNPs_41451 0 0 6 NOP58 POSTAR2 GSE43666,GSM1067862 chr6:4935769-4935807
64251 chr1 27631560 27631560 1 + A G UCEC 27631562 + 27631542 27631582 41 GGGAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGG GGGAAAAGGAGACCACCAGCCTGGTCCGTGTGCTCCAAGGG < 41bp 1 0.58025874478525 1 0.544809281826019 experiment 0.839482510429501 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27631562 chr1:27631560 nonsynonymous SNV 0.997 1 19 hm5C_associated_SNPs_41452 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr1:27631560-27631580
64251 chr1 27631560 27631560 1 + A G UCEC 27631567 + 27631547 27631587 41 AAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGGGATGA AAGGAGACCACCAGCCTGGTCCGTGTGCTCCAAGGGGATGA < 41bp 1 0.183867741045642 1 0.0661131739616394 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27631567 chr1:27631560 nonsynonymous SNV 0.997 1 14 hm5C_associated_SNPs_41453 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr1:27631560-27631580
64251 chr19 11548775 11548775 1 + T C UCEC 11548761 + 11548741 11548781 41 GGCTATAAGCCCCTGTATATCCCCTCCAACCGGGTCAACGA GGCTATAAGCCCCTGTATATCCCCTCCAACCGGGCCAACGA < 41bp 1 0.356049737399799 1 0.215648949146271 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548761 chr19:11548775 nonsynonymous SNV 0.966 3 35 hm5C_associated_SNPs_41454 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11548744-11548775
64251 chr10 91465086 91465086 1 + G A UCEC 91465083 + 91465063 91465103 41 TTTTAATCAAGAGGGAGTACCTCGACCATCTTATGTTTTTA TTTTAATCAAGAGGGAGTACCTCAACCATCTTATGTTTTTA < 41bp 1 0.554744525550609 1 0.37250941991806 experiment 0.890510948898781 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91465083 chr10:91465086 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_41455 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:91465078-91465098
64251 chr8 144732944 144732944 1 + G A UCEC 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCATCATCGCTCAGACCTTATTGAACACCA < 41bp 1 0.478503368664749 1 0.0967627465724945 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732944 nonsynonymous SNV 0.003 1 14 hm5C_associated_SNPs_41456 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr8:144732906-144732960
64251 chr12 122079119 122079119 1 + C T UCEC 122079102 + 122079082 122079122 41 AACATCGAGGCGGTGAGCAACGTGCACAATCTCAACTCGGT AACATCGAGGCGGTGAGCAACGTGCACAATCTCAACTTGGT < 41bp 1 0.133922231519692 1 0.125593066215515 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ORAI1 ENSG00000182500 CDS Human other chr12:122079102 chr12:122079119 nonsynonymous SNV 0.986 2 38 hm5C_associated_SNPs_41458 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122079094-122079120
64251 chr16 22271810 22271810 1 + A G UCEC 22271796 + 22271776 22271816 41 TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAACATGGC TGCCCAGATTGGCCAGTGTTCAGTGACCTCGATAGCATGGC < 41bp 1 0.378893504956299 1 0.764914989471436 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22271796 chr16:22271810 nonsynonymous SNV 0.833 1 35 hm5C_associated_SNPs_41459 0 0 3 DDX24 POSTAR2 ENCODE chr16:22271802-22271841
64251 chr19 50919735 50919735 1 + G A UCEC 50919728 + 50919708 50919748 41 AGCAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCC AGCAGCAGCTGGCCAAGCCCCTCCTGCACATCTTCGAGCCC < 41bp 1 0.397422721715072 1 0.247885555028915 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919728 chr19:50919735 nonsynonymous SNV 0.997 4 28 hm5C_associated_SNPs_41460 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50919713-50919736
64251 chr19 50919735 50919735 1 + G A UCEC 50919730 + 50919710 50919750 41 CAGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCCAT CAGCAGCTGGCCAAGCCCCTCCTGCACATCTTCGAGCCCAT < 41bp 1 0.066287248317346 1 0.161419123411179 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919730 chr19:50919735 nonsynonymous SNV 0.997 4 26 hm5C_associated_SNPs_41461 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50919713-50919736
64251 chr19 50919735 50919735 1 + G A UCEC 50919731 + 50919711 50919751 41 AGCAGCTGGCCAAGCCCCTCCTGCGCATCTTCGAGCCCATC AGCAGCTGGCCAAGCCCCTCCTGCACATCTTCGAGCCCATC < 41bp 1 0.533568122221783 1 0.336264818906784 experiment 0.932863755556433 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919731 chr19:50919735 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_41462 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50919713-50919736
64251 chr10 75871687 75871687 1 + G T UCEC 75871668 + 75871648 75871688 41 CTTCCCGCCATCGACAAAGCCGGGCATCCCAGCCGCTGAGG CTTCCCGCCATCGACAAAGCCGGGCATCCCAGCCGCTGATG < 41bp 1 0.499376355386773 1 0.654867708683014 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75871668 chr10:75871687 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_41466 0 0 3 QKI POSTAR2 ENCODE chr10:75871616-75871699
64251 chr1 26109127 26109127 1 + G A UCEC 26109121 + 26109101 26109141 41 AAGCCGGTTTCTCTGGGATCCAAGACGTGTACAGTAGCACC AAGCCGGTTTCTCTGGGATCCAAGACATGTACAGTAGCACC < 41bp 1 0.585676878082853 1 0.602328181266785 experiment 0.828646243834293 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAN1C1 ENSG00000117643 CDS Human protein_coding chr1:26109121 chr1:26109127 nonsynonymous SNV 0.797 5 27 hm5C_associated_SNPs_41467 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:26109122-26109140
64251 chr1 110134773 110134773 1 + A G UCEC 110134762 + 110134742 110134782 41 GAGATCTATACTCACTTCACCTGTGCCACAGACACGAAGAA GAGATCTATACTCACTTCACCTGTGCCACAGGCACGAAGAA < 41bp 1 0.196990518411451 1 0.287428081035614 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GNAI3 ENSG00000065135 CDS Human protein_coding chr1:110134762 chr1:110134773 nonsynonymous SNV 1.000 5 32 hm5C_associated_SNPs_41468 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110134694-110134787
64251 chr5 72798825 72798825 1 + A G UCEC 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CGTTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC < 41bp 1 0.642513257359405 1 0.453345626592636 experiment 0.714973485281191 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798825 nonsynonymous SNV 1.000 0 2 hm5C_associated_SNPs_41469 0 0 42 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr20 54970777 54970777 1 + G A UCEC 54970762 + 54970742 54970782 41 CACCCTCGGAGCAGCTCCTGCATCTCATCAAACTCGGTAGA CACCCTCGGAGCAGCTCCTGCATCTCATCAAACTCAGTAGA < 41bp 1 0.164351340970444 1 0.128752917051315 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54970762 chr20:54970777 nonsynonymous SNV 0.916 3 36 hm5C_associated_SNPs_41470 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:54970752-54970777
64251 chr8 56864617 56864617 1 + T C UCEC 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGGCTATCACATCTCTCCACGAATCACTTTTCCCT < 41bp 1 0.747011260267038 1 0.920551419258118 experiment 0.505977479465924 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864617 nonsynonymous SNV 0.999 5 14 hm5C_associated_SNPs_41471 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr4 6925395 6925395 1 + C T UCEC 6925415 + 6925395 6925435 41 CGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC TGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGC < 41bp 1 0.0261706976972784 1 0.0260516107082367 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925415 chr4:6925395 synonymous SNV . 0 1 hm5C_associated_SNPs_41472 0 0 2 EIF3H POSTAR2 ENCODE chr4:6925359-6925419
64251 chrX 70514348 70514348 1 + G T UCEC 70514364 + 70514344 70514384 41 GACAGATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT GACATATGCAGTGAAGGCTCCTTCCTGCTAACCACGTAAGT < 41bp 1 0.0816942383978632 1 0.12838488817215 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70514364 chrX:70514348 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_41473 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70514338-70514359
64251 chr11 67378022 67378022 1 + C T UCEC 67378025 + 67378005 67378045 41 AAGCCCCGCCTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA AAGCCCCGCCTGAAGCCTCCCTTCCCCGCAGACGTGGGTAA < 41bp 1 0.163188777514432 1 0.0773984789848328 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378025 chr11:67378022 synonymous SNV . 0 18 hm5C_associated_SNPs_41475 0 0 4 DDX24 POSTAR2 ENCODE chr11:67377991-67378040
64251 chr12 124181003 124181003 1 + A T UCEC 124181019 + 124180999 124181039 41 CAACAGGATGAATAATGTCACGACTTTACATCTTTGGCAAT CAACTGGATGAATAATGTCACGACTTTACATCTTTGGCAAT < 41bp 1 0.253369633941891 1 0.0998455584049225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124181019 chr12:124181003 nonsynonymous SNV 0.001 3 5 hm5C_associated_SNPs_41477 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:124180988-124181015
64251 chr14 23240646 23240646 1 + C A UCEC 23240645 + 23240625 23240665 41 TTTCTCTTCTCCCCTCAGGTCCTTTACGACAGACCTTTACC TTTCTCTTCTCCCCTCAGGTCATTTACGACAGACCTTTACC < 41bp 1 0.0388017694770571 1 0.104668080806732 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240645 chr14:23240646 nonsynonymous SNV 0.866 4 22 hm5C_associated_SNPs_41478 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr14:23240640-23240660
64251 chr2 26987226 26987226 1 + G T UCEC 26987239 + 26987219 26987259 41 TGGCCTGGACCAAGTACCAGCTGTTCCTGGCCGGGCTCATG TGGCCTGTACCAAGTACCAGCTGTTCCTGGCCGGGCTCATG < 41bp 1 0.135694118049897 1 0.0987737774848938 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC35F6 ENSG00000213699 CDS Human protein_coding chr2:26987239 chr2:26987226 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_41479 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:26987220-26987240
64251 chr18 13056641 13056641 1 + C A UCEC 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTATGTTGGTACAAACTGTGGAATTGAACCAT < 41bp 1 0.0973238251125987 1 0.135035693645477 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056641 nonsynonymous SNV 0.003 2 12 hm5C_associated_SNPs_41481 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr18 13056641 13056641 1 + C A UCEC 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTATGTTGGTACAAACTGTGGAATTGAACCATGGGA < 41bp 1 0.348096618291778 1 0.219852179288864 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056641 nonsynonymous SNV 0.003 2 8 hm5C_associated_SNPs_41482 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:13056614-13056643
64251 chr11 73074857 73074857 1 + C T UCEC 73074840 + 73074820 73074860 41 ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGCGGC ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGTGGC < 41bp 1 0.369180861584954 1 0.249510645866394 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73074840 chr11:73074857 nonsynonymous SNV 0.971 1 38 hm5C_associated_SNPs_41483 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73074798-73074863
64251 chr6 3152762 3152762 1 + C T UCEC 3152743 + 3152723 3152763 41 CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGCG CTGCATTTGATGCCAGAAGGCAAACACAACCTGCATTTGTG < 41bp 1 0.124581273641028 1 0.43380743265152 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BPHL ENSG00000137274 CDS Human protein_coding chr6:3152743 chr6:3152762 nonsynonymous SNV 0.982 4 40 hm5C_associated_SNPs_41484 0 0 1 PPIG POSTAR2 ENCODE chr6:3152719-3152808
64251 chr7 139094314 139094314 1 + C T UCEC 139094319 + 139094299 139094339 41 TGTTTTTAAGAGAGTCGTAGCTGAGAAGCAGGAGAAAAGAA TGTTTTTAAGAGAGTTGTAGCTGAGAAGCAGGAGAAAAGAA < 41bp 1 0.490981995487283 1 0.15888187289238 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094319 chr7:139094314 synonymous SNV . 0 16 hm5C_associated_SNPs_41485 0 0 29 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:139094296-139094317
64251 chr16 28847783 28847783 1 + C T UCEC 28847774 + 28847754 28847794 41 CCCACTGCCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCT CCCACTGCCTCCCCAGCTCTCAGTGACCCTGACTGTCTCCT < 41bp 1 0.567874636466745 1 0.454065203666687 experiment 0.86425072706651 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847774 chr16:28847783 synonymous SNV . 0 30 hm5C_associated_SNPs_41486 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chr4 87691042 87691042 1 + T G UCEC 87691057 + 87691037 87691077 41 GCTCTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTG GCTCTGTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTG < 41bp 1 0.376372364151901 1 0.688832581043243 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87691057 chr4:87691042 nonsynonymous SNV 0.999 4 6 hm5C_associated_SNPs_41487 0 0 2 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr4:87691041-87691042
64251 chr4 87691042 87691042 1 + T G UCEC 87691060 + 87691040 87691080 41 CTTTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTGATG CTGTCCTGGACAGCCAGCAGCAGAAAGTGGAAAAATTGATG < 41bp 1 0.226777676387837 1 0.587614595890045 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87691060 chr4:87691042 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_41488 0 0 2 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr4:87691041-87691042
64251 chr19 7911463 7911463 1 + C T UCEC 7911474 + 7911454 7911494 41 ACTCCTCATCCCAGGAGGCCCTGTCGGCCCCCACCTGCTCC ACTCCTCATTCCAGGAGGCCCTGTCGGCCCCCACCTGCTCC < 41bp 1 0.221081384646666 1 0.0910734236240387 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EVI5L ENSG00000142459 CDS Human protein_coding chr19:7911474 chr19:7911463 nonsynonymous SNV 0.996 2 10 hm5C_associated_SNPs_41489 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:7911462-7911463
64251 chr1 156105746 156105746 1 + C T UCEC 156105730 + 156105710 156105750 41 AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGTGGGA < 41bp 1 0.25314447942684 1 0.20429790019989 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105730 chr1:156105746 nonsynonymous SNV 0.998 5 37 hm5C_associated_SNPs_41490 1 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chr17 38142934 38142934 1 + T C UCEC 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCCTATCTCCAACTCCTCGTGGTCACCTTCATGATGAA < 41bp 1 0.384671790627525 1 0.300720393657684 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142934 nonsynonymous SNV 0.999 3 29 hm5C_associated_SNPs_41493 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr2 71654038 71654038 1 + T C UCEC 71654019 + 71653999 71654039 41 CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTG CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTCG < 41bp 1 0.390049555634314 1 0.30489045381546 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654019 chr2:71654038 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_41494 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr2 71654038 71654038 1 + T C UCEC 71654044 + 71654024 71654064 41 CAAACAGGAACGCTTGGTAACTGTGGATGAAATTGGAGAAG CAAACAGGAACGCTCGGTAACTGTGGATGAAATTGGAGAAG < 41bp 1 0.497697793565741 1 0.109614878892899 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654044 chr2:71654038 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_41495 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr2 152276748 152276748 1 + G T UCEC 152276742 + 152276722 152276762 41 AATTCAAATGGGAGAAGAGGCAGTGAGGTGGGCAAAACTGG AATTCAAATGGGAGAAGAGGCAGTGATGTGGGCAAAACTGG < 41bp 1 0.341060670776433 1 0.165340811014175 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152276742 chr2:152276748 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_41496 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:152276729-152276754
64251 chr18 9954096 9954096 1 + G T UCEC 9954099 + 9954079 9954119 41 ACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCA ACATTCGGATAAACCTGTATCAACCTCAACTGCATCCTTCA < 41bp 1 0.352313147989922 1 0.362146496772766 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VAPA ENSG00000101558 CDS Human protein_coding chr18:9954099 chr18:9954096 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_41497 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9954040-9954099
64251 chr9 100773654 100773654 1 + G A UCEC 100773653 + 100773633 100773673 41 GTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT GTAGAAGGGGATGAGGACGACAATGAAGTCAGTGAGGAGGT < 41bp 1 0.40013050267634 1 0.316106736660004 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773653 chr9:100773654 nonsynonymous SNV 0.217 0 22 hm5C_associated_SNPs_41498 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773654 100773654 1 + G A UCEC 100773662 + 100773642 100773682 41 GATGAGGACGACGATGAAGTCAGTGAGGAGGTCAGTGCAGC GATGAGGACGACAATGAAGTCAGTGAGGAGGTCAGTGCAGC < 41bp 1 0.606076599473559 1 0.46339163184166 experiment 0.787846801052883 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773662 chr9:100773654 nonsynonymous SNV 0.217 0 13 hm5C_associated_SNPs_41499 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr19 36221739 36221739 1 + C T UCEC 36221735 + 36221715 36221755 41 TGGAGGCTGCAGAGGAGAACCAGACCATTGTGCACAGCCCC TGGAGGCTGCAGAGGAGAACCAGATCATTGTGCACAGCCCC < 41bp 1 0.236889769986308 1 0.778967499732971 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36221735 chr19:36221739 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_41500 0 0 1 SUB1 POSTAR2 ENCODE chr19:36221705-36221769
64251 chr7 135312781 135312781 1 + G T UCEC 135312770 + 135312750 135312790 41 TCATCCCTACCCCAGTGGATCGCTACCGCCAGATTCTCCTC TCATCCCTACCCCAGTGGATCGCTACCGCCATATTCTCCTC < 41bp 1 0.517873027044991 1 0.112628638744354 experiment 0.964253945910018 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312770 chr7:135312781 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_41501 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135312748-135312781
64251 chr2 32724749 32724749 1 + C T UCEC 32724730 + 32724710 32724750 41 TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCACC TATTTCTGCCGTGATAGAATCGGTTACATTTTTAGTGCATC < 41bp 1 0.0484950820123808 1 0.332287162542343 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32724730 chr2:32724749 synonymous SNV . 0 40 hm5C_associated_SNPs_41502 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:32724727-32724765
64251 chr6 52288771 52288771 1 + C T UCEC 52288769 + 52288749 52288789 41 AGCCTTCCACAGAAGTCAGACGCTGAGCTACAGGAACGGCT AGCCTTCCACAGAAGTCAGACGTTGAGCTACAGGAACGGCT < 41bp 1 0.0966332022111796 1 0.178291618824005 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52288769 chr6:52288771 synonymous SNV . 0 23 hm5C_associated_SNPs_41503 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:52288765-52288786
64251 chrX 69639612 69639612 1 + C A UCEC 69639607 + 69639587 69639627 41 CAGGATTGAGCTTCTTTAATCCCGTCTGTGCCACCCCCAAT CAGGATTGAGCTTCTTTAATCCCGTATGTGCCACCCCCAAT < 41bp 1 0.446331024736061 1 0.223783195018768 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639607 chrX:69639612 synonymous SNV . 0 26 hm5C_associated_SNPs_41504 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:69639604-69639624
64251 chr11 117152347 117152347 1 + G T UCEC 117152351 + 117152331 117152371 41 CATATCCAGTTAGTGAGGAACGGAGCCAAGCTGAGCAGCCT CATATCCAGTTAGTGATGAACGGAGCCAAGCTGAGCAGCCT < 41bp 1 0.635386105857949 1 0.797691166400909 experiment 0.729227788284102 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152351 chr11:117152347 nonsynonymous SNV 0.994 4 17 hm5C_associated_SNPs_41505 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117152320-117152360
64251 chr16 66918571 66918571 1 + C A UCEC 66918554 + 66918534 66918574 41 CCAATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGC CCAATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCATGC < 41bp 1 0.701148382768212 1 0.238582909107208 experiment 0.597703234463576 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918554 chr16:66918571 synonymous SNV . 0 38 hm5C_associated_SNPs_41506 0 0 1 GRWD1 POSTAR2 ENCODE chr16:66918505-66918615
64251 chr8 9620705 9620705 1 + T G UCEC 9620699 + 9620679 9620719 41 TCACTGTGTTAATCAGGGAACGATTTTGCTGGATCTTGCTC TCACTGTGTTAATCAGGGAACGATTTGGCTGGATCTTGCTC < 41bp 1 0.0767680250466029 1 0.0632745325565338 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9620699 chr8:9620705 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_41507 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr8:9620686-9620725
64251 chr3 47455570 47455570 1 - C A UCEC 47455586 - 47455566 47455606 41 CATGTCCTTGCCTCCAGGACCTGGGCTGTGGTGCAAGCTTG CATGTCCTTGCCTCCAGGACCTGGGCTGTGGTGCAATCTTG < 41bp 1 0.451896587679536 1 0.17934250831604 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SCAP ENSG00000114650 CDS Human protein_coding chr3:47455586 chr3:47455570 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_41508 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:47455549-47455571
64251 chr16 23578376 23578376 1 + G A UCEC 23578358 + 23578338 23578378 41 TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAGAC TAAAAAATGTGGTCAGTGAACCTATCGAAGGACATGAAAAC < 41bp 1 0.0644901525343829 1 0.0718959867954254 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23578358 chr16:23578376 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_41509 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:23578290-23578386
64251 chr10 102824017 102824017 1 + G T UCEC 102824020 + 102824000 102824040 41 TCCCGCCTTCACCCCCAGGGCCCCAGATCGTGTCACATCCA TCCCGCCTTCACCCCCATGGCCCCAGATCGTGTCACATCCA < 41bp 1 0.263681990438085 1 0.264147460460663 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KAZALD1;KAZALD1 ENSG00000107821 splicing Human protein_coding chr10:102824020 chr10:102824017 . 0.915 0 18 hm5C_associated_SNPs_41510 0 0 1 SF3A3 POSTAR2 ENCODE chr10:102823972-102824027
64251 chr10 102824017 102824017 1 + G T UCEC 102824021 + 102824001 102824041 41 CCCGCCTTCACCCCCAGGGCCCCAGATCGTGTCACATCCAT CCCGCCTTCACCCCCATGGCCCCAGATCGTGTCACATCCAT < 41bp 1 0.0950208412253789 1 0.0942524671554565 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KAZALD1;KAZALD1 ENSG00000107821 splicing Human protein_coding chr10:102824021 chr10:102824017 . 0.915 0 17 hm5C_associated_SNPs_41511 0 0 1 SF3A3 POSTAR2 ENCODE chr10:102823972-102824027
64251 chr10 102824017 102824017 1 + G T UCEC 102824022 + 102824002 102824042 41 CCGCCTTCACCCCCAGGGCCCCAGATCGTGTCACATCCATA CCGCCTTCACCCCCATGGCCCCAGATCGTGTCACATCCATA < 41bp 1 0.142662312739317 1 0.0928701758384705 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KAZALD1;KAZALD1 ENSG00000107821 splicing Human protein_coding chr10:102824022 chr10:102824017 . 0.915 0 16 hm5C_associated_SNPs_41512 0 0 1 SF3A3 POSTAR2 ENCODE chr10:102823972-102824027
64251 chr10 102824017 102824017 1 + G T UCEC 102824023 + 102824003 102824043 41 CGCCTTCACCCCCAGGGCCCCAGATCGTGTCACATCCATAT CGCCTTCACCCCCATGGCCCCAGATCGTGTCACATCCATAT < 41bp 1 0.111565092984114 1 0.401343286037445 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KAZALD1;KAZALD1 ENSG00000107821 splicing Human protein_coding chr10:102824023 chr10:102824017 . 0.915 0 15 hm5C_associated_SNPs_41513 0 0 1 SF3A3 POSTAR2 ENCODE chr10:102823972-102824027
64251 chr1 114500802 114500802 1 + G A UCEC 114500816 + 114500796 114500836 41 GCACCAGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA GCACCAATTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA < 41bp 1 0.330811920889401 1 0.465157687664032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114500816 chr1:114500802 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_41514 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:114500694-114500804
64251 chr3 126751369 126751369 1 + C A UCEC 126751389 + 126751369 126751409 41 CTGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA ATGGGCAAGGACTCACCCTCCAACAAGCTGCTCTACGCCAA < 41bp 1 0.478820565841458 1 0.649330139160156 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126751389 chr3:126751369 nonsynonymous SNV 0.996 4 1 hm5C_associated_SNPs_41516 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:126751366-126751390
64251 chr8 22054866 22054866 1 + C T UCEC 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCCGAGGTCATCACCTCCCAGTACAACAATATGCGCG < 41bp 1 0.140815417231682 1 0.283278346061707 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054866 synonymous SNV . 0 34 hm5C_associated_SNPs_41517 0 0 1 ZNF622 POSTAR2 ENCODE chr8:22054803-22054881
64251 chr19 39215182 39215182 1 + C T UCEC 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGTC < 41bp 1 0.327541380741471 1 0.715404391288757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215182 nonsynonymous SNV 0.997 0 40 hm5C_associated_SNPs_41518 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215182 39215182 1 + C T UCEC 39215169 + 39215149 39215189 41 CGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCCCTGGAT CGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGTCCTGGAT < 41bp 1 0.250810070965464 1 0.0405273735523224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215169 chr19:39215182 nonsynonymous SNV 0.997 0 34 hm5C_associated_SNPs_41519 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215182 39215182 1 + C T UCEC 39215184 + 39215164 39215204 41 CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGA CAGGCCAATGTTGTGGGGTCCTGGATCCAGACCAAGATGGA < 41bp 1 0.706225912901214 1 0.695255100727081 experiment 0.587548174197573 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215184 chr19:39215182 nonsynonymous SNV 0.997 0 19 hm5C_associated_SNPs_41520 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215182 39215182 1 + C T UCEC 39215191 + 39215171 39215211 41 ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGG ATGTTGTGGGGTCCTGGATCCAGACCAAGATGGAGGTGAGG < 41bp 1 0.190237284116017 1 0.488530874252319 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215191 chr19:39215182 nonsynonymous SNV 0.997 0 12 hm5C_associated_SNPs_41521 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215182 39215182 1 + C T UCEC 39215195 + 39215175 39215215 41 TGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGGCACG TGTGGGGTCCTGGATCCAGACCAAGATGGAGGTGAGGCACG < 41bp 1 0.319047119889314 1 0.499410271644592 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215195 chr19:39215182 nonsynonymous SNV 0.997 0 8 hm5C_associated_SNPs_41522 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr19 39215182 39215182 1 + C T UCEC 39215196 + 39215176 39215216 41 GTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAGGCACGG GTGGGGTCCTGGATCCAGACCAAGATGGAGGTGAGGCACGG < 41bp 1 0.798143814769204 1 0.365390837192535 experiment 0.403712370461591 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215196 chr19:39215182 nonsynonymous SNV 0.997 0 7 hm5C_associated_SNPs_41523 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr15 75499562 75499562 1 + C T UCEC 75499548 + 75499528 75499568 41 ATGCCCGGGATGACCTCTCTCTCTATGGAGCATCCCCTGGG ATGCCCGGGATGACCTCTCTCTCTATGGAGCATCTCCTGGG < 41bp 1 0.690797026881195 1 0.916932463645935 experiment 0.618405946237611 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control C15orf39 ENSG00000167173 CDS Human protein_coding chr15:75499548 chr15:75499562 synonymous SNV . 0 35 hm5C_associated_SNPs_41524 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:75499517-75499585
64251 chr14 102478270 102478270 1 + C T UCEC 102478250 + 102478230 102478270 41 ATCACCCAGATCAATCATGGCCTGATGATGGTGGGGCCCTC ATCACCCAGATCAATCATGGCCTGATGATGGTGGGGCCCTT < 41bp 1 0.0903699340929641 1 0.0648582577705383 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478250 chr14:102478270 nonsynonymous SNV 0.994 4 41 hm5C_associated_SNPs_41525 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102478245-102478285
64251 chr14 102478270 102478270 1 + C T UCEC 102478266 + 102478246 102478286 41 ATGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGC ATGGCCTGATGATGGTGGGGCCCTTGGGAAGTGGGAAGAGC < 41bp 1 0.0134554029229877 1 0.0578262209892273 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478266 chr14:102478270 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_41526 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102478245-102478285
64251 chr14 102478270 102478270 1 + C T UCEC 102478267 + 102478247 102478287 41 TGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCA TGGCCTGATGATGGTGGGGCCCTTGGGAAGTGGGAAGAGCA < 41bp 1 0.0115974222937665 1 0.0935302972793579 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478267 chr14:102478270 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_41527 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102478245-102478285
64251 chr7 5643504 5643504 1 + G T UCEC 5643505 + 5643485 5643525 41 CTGGGACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATC CTGGGACAGGGGACTCAGATCTCTTCCTCATGAAGCTCATC < 41bp 1 0.174449142222863 1 0.199699729681015 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643505 chr7:5643504 nonsynonymous SNV 0.532 2 20 hm5C_associated_SNPs_41529 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chr7 5643504 5643504 1 + G T UCEC 5643510 + 5643490 5643530 41 ACAGGGGACTCAGAGCTCTTCCTCATGAAGCTCATCAACCG ACAGGGGACTCAGATCTCTTCCTCATGAAGCTCATCAACCG < 41bp 1 0.349541277140407 1 0.11724391579628 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643510 chr7:5643504 nonsynonymous SNV 0.532 2 15 hm5C_associated_SNPs_41530 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:5643491-5643526
64251 chr20 30898889 30898889 1 + G T UCEC 30898904 + 30898884 30898924 41 TTGCAGAGGAGAAGATGAGGCTGCTGAAGGAGAAAGAGAAA TTGCATAGGAGAAGATGAGGCTGCTGAAGGAGAAAGAGAAA < 41bp 1 0.479876882840627 1 0.187575042247772 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF3B ENSG00000101350;ENSG00000101350 exonic;splicing Human other chr20:30898904 chr20:30898889 stopgain 1.000 1 6 hm5C_associated_SNPs_41531 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:30898889-30898890
64251 chr9 131247129 131247129 1 + G A UCEC 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAA < 41bp 1 0.415173258826971 1 0.490970343351364 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247129 synonymous SNV . 0 41 hm5C_associated_SNPs_41532 0 0 7 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chr22 23615307 23615307 1 + C T UCEC 23615317 + 23615297 23615337 41 ACGAGGAGCACGCTGGTCCTCCATGTAAGTCACAGCGCCCC ACGAGGAGCATGCTGGTCCTCCATGTAAGTCACAGCGCCCC < 41bp 1 0.186510761466516 1 0.0942659974098206 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCR ENSG00000186716 CDS Human protein_coding chr22:23615317 chr22:23615307 nonsynonymous SNV 0.856 4 11 hm5C_associated_SNPs_41533 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23615271-23615309
64251 chr16 28994592 28994592 1 + G A UCEC 28994609 + 28994589 28994629 41 GGAGCCCCTACCTCATTGGCCTGGTGAGCATTATTTCTTGG GGAACCCCTACCTCATTGGCCTGGTGAGCATTATTTCTTGG < 41bp 1 0.489043440437069 1 0.0635210871696472 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28994609 chr16:28994592 nonsynonymous SNV 0.998 4 4 hm5C_associated_SNPs_41534 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28994573-28994599
64251 chr1 12027052 12027052 1 + G A UCEC 12027067 + 12027047 12027087 41 TGCCCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC TGCCCAGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGC < 41bp 1 0.476372298031344 1 0.0927470624446869 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027067 chr1:12027052 synonymous SNV . 0 6 hm5C_associated_SNPs_41535 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378375 chr1:12027040-12027060
64251 chrX 69370137 69370137 1 + C T UCEC 69370124 + 69370104 69370144 41 GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTACCG GTGACTGGTATGAGCAACATCGGAAATATGGAGTATTACCG < 41bp 1 0.787772664212306 1 0.405177175998688 experiment 0.424454671575388 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370124 chrX:69370137 nonsynonymous SNV 0.989 0 34 hm5C_associated_SNPs_41536 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69370097-69370156
64251 chr2 101622439 101622439 1 + C T UCEC 101622446 + 101622426 101622466 41 TGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAAT TGCCATACCGAATTCGTGTGCGGCTGTCCAGAAAACGTAAT < 41bp 1 0.625927724677077 1 0.229960590600967 experiment 0.748144550645846 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622446 chr2:101622439 synonymous SNV . 0 14 hm5C_associated_SNPs_41537 0 0 83 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:101622400-101622440
64251 chr2 101622439 101622439 1 + C T UCEC 101622449 + 101622429 101622469 41 CATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAG CATACCGAATTCGTGTGCGGCTGTCCAGAAAACGTAATGAG < 41bp 1 0.190985522832527 1 0.235334932804108 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622449 chr2:101622439 synonymous SNV . 0 11 hm5C_associated_SNPs_41538 0 0 83 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:101622400-101622440
64251 chr2 101622439 101622439 1 + C T UCEC 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATTCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG < 41bp 1 0.724619386552603 1 0.776577472686768 experiment 0.550761226894795 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622439 synonymous SNV . 0 7 hm5C_associated_SNPs_41539 0 0 83 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:101622400-101622440
64251 chr4 1017640 1017640 1 + C T UCEC 1017627 + 1017607 1017647 41 CGACCGCGCTTCACACAGCCCTCCAAGATGAGGCGCCGGGT CGACCGCGCTTCACACAGCCCTCCAAGATGAGGTGCCGGGT < 41bp 1 0.709959694120539 1 0.965886473655701 experiment 0.580080611758922 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1017627 chr4:1017640 nonsynonymous SNV 0.998 4 34 hm5C_associated_SNPs_41541 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr4:1017633-1017661
64251 chr1 39906770 39906770 1 + G A UCEC 39906771 + 39906751 39906791 41 CCTGTGGAGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATT CCTGTGGAGAAACTGAGAAACCTGAAGTGAGGAAGAGCATT < 41bp 1 0.092338135608768 1 0.126137107610703 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39906771 chr1:39906770 synonymous SNV . 0 20 hm5C_associated_SNPs_41542 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39906743-39906772
64251 chr1 39906770 39906770 1 + G A UCEC 39906772 + 39906752 39906792 41 CTGTGGAGAAACTGAGAAGCCTGAAGTGAGGAAGAGCATTG CTGTGGAGAAACTGAGAAACCTGAAGTGAGGAAGAGCATTG < 41bp 1 0.346439260792863 1 0.26474791765213 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39906772 chr1:39906770 synonymous SNV . 0 19 hm5C_associated_SNPs_41543 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:39906743-39906772
64251 chr1 120286594 120286594 1 + C A UCEC 120286596 + 120286576 120286616 41 CTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGG CTGGCACGTCATGGGCATATCCTCCTTGCTGCCCAGCCTGG < 41bp 1 0.15156096051655 1 0.112613141536713 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286596 chr1:120286594 synonymous SNV . 0 19 hm5C_associated_SNPs_41544 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286594 120286594 1 + C A UCEC 120286597 + 120286577 120286617 41 TGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGA TGGCACGTCATGGGCATATCCTCCTTGCTGCCCAGCCTGGA < 41bp 1 0.659426663158052 1 0.42692819237709 experiment 0.681146673683895 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286597 chr1:120286594 synonymous SNV . 0 18 hm5C_associated_SNPs_41545 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286594 120286594 1 + C A UCEC 120286600 + 120286580 120286620 41 CACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGAAGC CACGTCATGGGCATATCCTCCTTGCTGCCCAGCCTGGAAGC < 41bp 1 0.34912027650629 1 0.23743525147438 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286600 chr1:120286594 synonymous SNV . 0 15 hm5C_associated_SNPs_41546 0 0 17 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr2 202141596 202141596 1 + G A UCEC 202141594 + 202141574 202141614 41 AAAAGCAAACCTCGGGGATACTGTCTGATCATCAACAATCA AAAAGCAAACCTCGGGGATACTATCTGATCATCAACAATCA < 41bp 1 0.197487107734519 1 0.22907418012619 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141594 chr2:202141596 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_41547 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:202141579-202141603
64251 chr17 37814072 37814072 1 + C T UCEC 37814079 + 37814059 37814099 41 TCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTG TCCTAGGCTATGCTGTGCTGCGGCTCCGGCACTGGTGGGTG < 41bp 1 0.437839102278451 1 0.447749257087708 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STARD3 ENSG00000131748 CDS Human protein_coding chr17:37814079 chr17:37814072 synonymous SNV . 0 14 hm5C_associated_SNPs_41548 0 0 4 DDX24 POSTAR2 ENCODE chr17:37814031-37814105
64251 chr13 24871544 24871544 1 + G A UCEC 24871549 + 24871529 24871569 41 AATTGATTCATTCTGGGGAGCTGACCAAAATCACTAAGCAA AATTGATTCATTCTGAGGAGCTGACCAAAATCACTAAGCAA < 41bp 1 0.0605526418883323 1 0.194883316755295 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24871549 chr13:24871544 nonsynonymous SNV 0.987 5 16 hm5C_associated_SNPs_41550 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr13:24871533-24871559
64251 chr1 984707 984707 1 + C T UCEC 984697 + 984677 984717 41 TGGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCAC TGGCACCGCCTGGAGCTGTCCCGGCACTGGTGCCGGGGCAC < 41bp 1 0.232332407778236 1 0.721747994422913 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984697 chr1:984707 nonsynonymous SNV 0.459 1 31 hm5C_associated_SNPs_41551 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984707 984707 1 + C T UCEC 984698 + 984678 984718 41 GGCACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACC GGCACCGCCTGGAGCTGTCCCGGCACTGGTGCCGGGGCACC < 41bp 1 0.721818001441729 1 0.877903580665588 experiment 0.556363997116542 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984698 chr1:984707 nonsynonymous SNV 0.459 1 30 hm5C_associated_SNPs_41552 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984707 984707 1 + C T UCEC 984701 + 984681 984721 41 ACCGCCTGGAGCTGTCCCGGCACTGGCGCCGGGGCACCCTC ACCGCCTGGAGCTGTCCCGGCACTGGTGCCGGGGCACCCTC < 41bp 1 0.324572393569537 1 0.468052566051483 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984701 chr1:984707 nonsynonymous SNV 0.459 1 27 hm5C_associated_SNPs_41553 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984707 984707 1 + C T UCEC 984709 + 984689 984729 41 GAGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGA GAGCTGTCCCGGCACTGGTGCCGGGGCACCCTCTCGGTGGA < 41bp 1 0.404431015746866 1 0.739206552505493 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984709 chr1:984707 nonsynonymous SNV 0.459 1 19 hm5C_associated_SNPs_41554 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr1 984707 984707 1 + C T UCEC 984710 + 984690 984730 41 AGCTGTCCCGGCACTGGCGCCGGGGCACCCTCTCGGTGGAT AGCTGTCCCGGCACTGGTGCCGGGGCACCCTCTCGGTGGAT < 41bp 1 0.613673980765634 1 0.879595994949341 experiment 0.772652038468732 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:984710 chr1:984707 nonsynonymous SNV 0.459 1 18 hm5C_associated_SNPs_41555 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:984684-984708
64251 chr11 722469 722469 1 + C A UCEC 722478 + 722458 722498 41 TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTCCC TCCCGAGATGCAGTGGACTTCCTGCGCGGCCACCTGGTCCC < 41bp 1 0.230683680202474 1 0.151110678911209 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722478 chr11:722469 nonsynonymous SNV . 0 12 hm5C_associated_SNPs_41557 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722448-722470
64251 chr8 22429249 22429249 1 + C A UCEC 22429234 + 22429214 22429254 41 TTCCTGTCAACTCCCAGAATCTTGGCACCCCTGGTCCAGCT TTCCTGTCAACTCCCAGAATCTTGGCACCCCTGGTACAGCT < 41bp 1 0.239698286459881 1 0.301255732774734 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22429234 chr8:22429249 nonsynonymous SNV 0.002 0 36 hm5C_associated_SNPs_41559 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:22429229-22429264
64251 chr9 131198061 131198061 1 + G A UCEC 131198051 + 131198031 131198071 41 GCTCAGTGACACGGAGACATCCTCTCCATGGGATGATGACA GCTCAGTGACACGGAGACATCCTCTCCATGAGATGATGACA < 41bp 1 0.0494709626372756 1 0.0510405898094177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198051 chr9:131198061 stopgain 0.965 1 31 hm5C_associated_SNPs_41560 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chr9 131198061 131198061 1 + G A UCEC 131198054 + 131198034 131198074 41 CAGTGACACGGAGACATCCTCTCCATGGGATGATGACAGCG CAGTGACACGGAGACATCCTCTCCATGAGATGATGACAGCG < 41bp 1 0.667677652547405 1 0.949862003326416 experiment 0.664644694905191 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CERCAM ENSG00000167123 CDS Human protein_coding chr9:131198054 chr9:131198061 stopgain 0.965 1 28 hm5C_associated_SNPs_41561 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131198031-131198072
64251 chrX 107821186 107821186 1 + C A UCEC 107821198 + 107821178 107821218 41 TTAGGGCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGG TTAGGGCCATCCTGGTCCACCAGGACTTCCAGGACCTAAGG < 41bp 1 0.47631048631492 1 0.518548369407654 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821198 chrX:107821186 nonsynonymous SNV 0.982 2 9 hm5C_associated_SNPs_41562 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chrX 107821186 107821186 1 + C A UCEC 107821203 + 107821183 107821223 41 GCCCTCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATT GCCATCCTGGTCCACCAGGACTTCCAGGACCTAAGGTAATT < 41bp 1 0.0324513711327841 1 0.0360987782478333 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107821203 chrX:107821186 nonsynonymous SNV 0.982 2 4 hm5C_associated_SNPs_41563 0 0 3 PPIG POSTAR2 ENCODE chrX:107821181-107821202
64251 chr14 39649831 39649831 1 + A G UCEC 39649851 + 39649831 39649871 41 ACAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGG GCAAGAAGAGGGTAAGGTGGCTCAGCGAGAGGAAGAGTTGG < 41bp 1 0.727211461108451 1 0.368490666151047 experiment 0.545577077783098 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649851 chr14:39649831 synonymous SNV . 0 1 hm5C_associated_SNPs_41565 0 0 31 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr14:39649820-39649840
64251 chr17 4623696 4623696 1 + C T UCEC 4623704 + 4623684 4623724 41 CCAGGGATGTCTCTGTGGAGCTGCCTTTTGTTCTTATGCAC CCAGGGATGTCTTTGTGGAGCTGCCTTTTGTTCTTATGCAC < 41bp 1 0.362235229282773 1 0.0707744657993317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4623704 chr17:4623696 nonsynonymous SNV 0.992 2 13 hm5C_associated_SNPs_41566 0 0 2 PPIG POSTAR2 ENCODE chr17:4623686-4623709
64251 chr19 3533342 3533342 1 + C A UCEC 3533341 + 3533321 3533361 41 GATCCTTGTCTGGAAGTACCCCTCCCTGACCCAGGTGGCCA GATCCTTGTCTGGAAGTACCCATCCCTGACCCAGGTGGCCA < 41bp 1 0.243442436774792 1 0.222057521343231 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3533341 chr19:3533342 synonymous SNV . 0 22 hm5C_associated_SNPs_41568 0 0 1 PPIG POSTAR2 ENCODE chr19:3533340-3533390
64251 chr20 47691917 47691917 1 + G T UCEC 47691921 + 47691901 47691941 41 ATGCAAGTTTTTTGAGGGACCTGTGACAGGAATCTTCTCTG ATGCAAGTTTTTTGAGTGACCTGTGACAGGAATCTTCTCTG < 41bp 1 0.61715408395591 1 0.256319642066956 experiment 0.765691832088181 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CSE1L ENSG00000124207 CDS Human protein_coding chr20:47691921 chr20:47691917 stopgain 0.994 1 17 hm5C_associated_SNPs_41569 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:47691900-47691920
64251 chrX 70779269 70779269 1 + A C UCEC 70779251 + 70779231 70779271 41 CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAAATT CTTATGCAGTCTATTCCAGGCATGCACAATCCTGATAACTT < 41bp 1 0.0837095008632509 1 0.0560456216335297 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70779251 chrX:70779269 nonsynonymous SNV 0.997 1 39 hm5C_associated_SNPs_41571 0 0 4 DDX24 POSTAR2 ENCODE chrX:70779236-70779272
64251 chr12 57627877 57627877 1 + G A UCEC 57627865 + 57627845 57627885 41 TTTATAGATGAAGGGGTCAACATTGGCTTAGAGGTGAAGAG TTTATAGATGAAGGGGTCAACATTGGCTTAGAAGTGAAGAG < 41bp 1 0.246316259426188 1 0.17951437830925 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SHMT2 ENSG00000182199 CDS Human protein_coding chr12:57627865 chr12:57627877 synonymous SNV . 0 33 hm5C_associated_SNPs_41572 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57627798-57627891
64251 chr11 61631197 61631197 1 + G A UCEC 61631203 + 61631183 61631223 41 CAGCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG CAGCCACCTGCAACATGGAGCAGTCCTTCTTCAACGACTGG < 41bp 1 0.0295662465776557 1 0.300368010997772 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61631203 chr11:61631197 nonsynonymous SNV 0.993 3 15 hm5C_associated_SNPs_41573 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61631192-61631224
64251 chr3 127775660 127775660 1 + C T UCEC 127775667 + 127775647 127775687 41 CCAAAAGACCGAGCTCTCTTCAACGGAGCCCAAAAGTGTAA CCAAAAGACCGAGTTCTCTTCAACGGAGCCCAAAAGTGTAA < 41bp 1 0.497566081416457 1 0.183895885944366 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127775667 chr3:127775660 nonsynonymous SNV 0.996 1 14 hm5C_associated_SNPs_41575 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr3:127775633-127775678
64251 chrX 129063352 129063352 1 + T C UCEC 129063370 + 129063350 129063390 41 ATTTGAAAGGACCATCCAGACCCCCATAGGATCCACATGGA ATCTGAAAGGACCATCCAGACCCCCATAGGATCCACATGGA < 41bp 1 0.309964994966074 1 0.0712369978427887 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP14A ENSG00000156697 CDS Human protein_coding chrX:129063370 chrX:129063352 nonsynonymous SNV 0.997 4 3 hm5C_associated_SNPs_41580 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:129063350-129063371
64251 chr4 170616784 170616784 1 + G A UCEC 170616800 + 170616780 170616820 41 AGCTGCAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAG AGCTACAGGGGTTTCTGTAGCTTTTGGTGCACCAATTGGAG < 41bp 1 0.126729130824577 1 0.0792041122913361 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170616800 chr4:170616784 nonsynonymous SNV 0.993 5 5 hm5C_associated_SNPs_41582 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:170616760-170616802
64251 chr1 28862489 28862489 1 + C A UCEC 28862499 + 28862479 28862519 41 TTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTC TTGCCATCTCACATGAGGGCCACGTGTACGGCTTCGGCCTC < 41bp 1 0.590336776891955 1 0.0876669883728027 experiment 0.819326446216091 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862499 chr1:28862489 synonymous SNV . 0 11 hm5C_associated_SNPs_41583 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28862448-28862506
64251 chr11 126213248 126213248 1 + G T UCEC 126213246 + 126213226 126213266 41 ATCTGCCATCGCCGGGGCATCAGATCCCTACGCGACCTTAC ATCTGCCATCGCCGGGGCATCATATCCCTACGCGACCTTAC < 41bp 1 0.156998049025372 1 0.378813177347183 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DCPS ENSG00000110063 CDS Human protein_coding chr11:126213246 chr11:126213248 nonsynonymous SNV 0.841 2 23 hm5C_associated_SNPs_41584 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:126213246-126213284
64251 chr10 134219536 134219536 1 + T C UCEC 134219517 + 134219497 134219537 41 TCCATGGTTTTCCTTGGTGGCCGGCGCGTGTTCTTGACATC TCCATGGTTTTCCTTGGTGGCCGGCGCGTGTTCTTGACACC < 41bp 1 0.166707321220772 1 0.509537875652313 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219517 chr10:134219536 nonsynonymous SNV 0.987 1 40 hm5C_associated_SNPs_41585 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:134219536-134219537
64251 chr8 23114073 23114073 1 + G A UCEC 23114068 + 23114048 23114088 41 ATGCAGAGTGAACAGCTTCTCTCACGCAAAGTGGAGTCCTT ATGCAGAGTGAACAGCTTCTCTCACACAAAGTGGAGTCCTT < 41bp 1 0.343685636303097 1 0.138097196817398 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114068 chr8:23114073 nonsynonymous SNV 0.833 2 26 hm5C_associated_SNPs_41586 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr8 23114073 23114073 1 + G A UCEC 23114070 + 23114050 23114090 41 GCAGAGTGAACAGCTTCTCTCACGCAAAGTGGAGTCCTTAT GCAGAGTGAACAGCTTCTCTCACACAAAGTGGAGTCCTTAT < 41bp 1 0.315099713242259 1 0.0565425157546997 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114070 chr8:23114073 nonsynonymous SNV 0.833 2 24 hm5C_associated_SNPs_41587 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr1 183091301 183091301 1 + C T UCEC 183091283 + 183091263 183091303 41 GGAGATTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTG GGAGATTCAACTGCAGGCACCTCCTCCGATTGCCAACCTTG < 41bp 1 0.0990060416719981 1 0.115908592939377 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091283 chr1:183091301 synonymous SNV . 0 39 hm5C_associated_SNPs_41588 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:183091300-183091301
64251 chr1 183091301 183091301 1 + C T UCEC 183091288 + 183091268 183091308 41 TTCAACTGCAGGCACCTCCTCCGATTGCCAACCCTGTCCGT TTCAACTGCAGGCACCTCCTCCGATTGCCAACCTTGTCCGT < 41bp 1 0.188450477108928 1 0.270143985748291 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183091288 chr1:183091301 synonymous SNV . 0 34 hm5C_associated_SNPs_41589 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:183091300-183091301
64251 chr6 34730433 34730433 1 + A G UCEC 34730453 + 34730433 34730473 41 ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGAC GTCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGAC < 41bp 1 0.632518846142581 1 0.802953362464905 experiment 0.734962307714838 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNRPC ENSG00000124562 CDS Human protein_coding chr6:34730453 chr6:34730433 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_41590 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:34730381-34730466
64251 chr12 57909064 57909064 1 + G T UCEC 57909051 + 57909031 57909071 41 AGGCCCAGCTGCAGCTCCCACCTCCAGCCTGCAGTATCCTG AGGCCCAGCTGCAGCTCCCACCTCCAGCCTGCATTATCCTG < 41bp 1 0.0585198460811178 1 0.0662634670734406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57909051 chr12:57909064 nonsynonymous SNV 0.827 0 34 hm5C_associated_SNPs_41592 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:57909026-57909074
64251 chr16 842501 842501 1 + G T UCEC 842482 + 842462 842502 41 CATCCTGAACCGCAAGGGGCCACAGGAGGTGGGGCCACAGG CATCCTGAACCGCAAGGGGCCACAGGAGGTGGGGCCACATG < 41bp 1 0.528750067951064 1 0.288609385490417 experiment 0.942499864097872 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842482 chr16:842501 nonsynonymous SNV 0.001 1 40 hm5C_associated_SNPs_41593 0 0 1 PPIG POSTAR2 ENCODE chr16:842474-842506
64251 chr5 141364476 141364476 1 + C T UCEC 141364483 + 141364463 141364503 41 ACATTTCAATGACCCTGGTTCACCATGTTTTAACCGGTATG ACATTTCAATGACTCTGGTTCACCATGTTTTAACCGGTATG < 41bp 1 0.660144685692038 1 0.400575697422028 experiment 0.679710628615923 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141364483 chr5:141364476 nonsynonymous SNV 0.257 1 14 hm5C_associated_SNPs_41594 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:141364445-141364483
64251 chr5 34824168 34824168 1 + C T UCEC 34824172 + 34824152 34824192 41 AGTGATAACCACGCTGCGGACTGCAGCAAAAGAGATGGAAG AGTGATAACCACGCTGTGGACTGCAGCAAAAGAGATGGAAG < 41bp 1 0.791623105210655 1 0.688880980014801 experiment 0.41675378957869 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAI14 ENSG00000039560 CDS Human protein_coding chr5:34824172 chr5:34824168 nonsynonymous SNV 0.480 3 17 hm5C_associated_SNPs_41595 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:34824160-34824180
64251 chr5 34824168 34824168 1 + C T UCEC 34824175 + 34824155 34824195 41 GATAACCACGCTGCGGACTGCAGCAAAAGAGATGGAAGAAA GATAACCACGCTGTGGACTGCAGCAAAAGAGATGGAAGAAA < 41bp 1 0.509224979688894 1 0.251074343919754 experiment 0.981550040622211 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAI14 ENSG00000039560 CDS Human protein_coding chr5:34824175 chr5:34824168 nonsynonymous SNV 0.480 3 14 hm5C_associated_SNPs_41596 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:34824160-34824180
64251 chr5 34824168 34824168 1 + C T UCEC 34824178 + 34824158 34824198 41 AACCACGCTGCGGACTGCAGCAAAAGAGATGGAAGAAAAAA AACCACGCTGTGGACTGCAGCAAAAGAGATGGAAGAAAAAA < 41bp 1 0.407186715306355 1 0.533422470092773 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAI14 ENSG00000039560 CDS Human protein_coding chr5:34824178 chr5:34824168 nonsynonymous SNV 0.480 3 11 hm5C_associated_SNPs_41597 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:34824160-34824180
64251 chr15 74920375 74920375 1 + G T UCEC 74920360 + 74920340 74920380 41 TGGAGCATTGGCTGCATTCTCTTTGAGTACTACCGGGGCTT TGGAGCATTGGCTGCATTCTCTTTGAGTACTACCGTGGCTT < 41bp 1 0.312176536393928 1 0.299371123313904 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74920360 chr15:74920375 synonymous SNV . 0 36 hm5C_associated_SNPs_41598 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr15:74920366-74920387
64251 chr11 9462065 9462065 1 + C A UCEC 9462070 + 9462050 9462090 41 ATTTGGAGATTCTGGCTAAGCAGGCTGGTGAAGATGGAGAT ATTTGGAGATTCTGGATAAGCAGGCTGGTGAAGATGGAGAT < 41bp 1 0.696344376726001 1 0.678632974624634 experiment 0.607311246547999 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9462070 chr11:9462065 nonsynonymous SNV 0.998 1 16 hm5C_associated_SNPs_41599 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9462046-9462127
64251 chr11 57574424 57574424 1 + G T UCEC 57574432 + 57574412 57574452 41 AAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC AAACGATACAGTTGATTTCCCTAAAAGAACGAGTCCAGCTC < 41bp 1 0.622967306005319 1 0.499224573373795 experiment 0.754065387989361 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57574432 chr11:57574424 synonymous SNV . 0 13 hm5C_associated_SNPs_41600 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:57574416-57574438
64251 chr12 64810528 64810528 1 + A G UCEC 64810521 + 64810501 64810541 41 GCTTTCAAGTACTGGAACATCAAGTTAAATACAAGTAAGGC GCTTTCAAGTACTGGAACATCAAGTTAGATACAAGTAAGGC < 41bp 1 0.570172693045279 1 0.382301241159439 experiment 0.859654613909443 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XPOT ENSG00000184575 CDS Human protein_coding chr12:64810521 chr12:64810528 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_41601 0 0 1 IGF2BP1 POSTAR2 ENCODE chr12:64810524-64810534
64251 chr10 128830505 128830505 1 + G A UCEC 128830517 + 128830497 128830537 41 AGCATGCAGAGCCTTGGGAGCTGCACCATTAGCAAGGACTC AGCATGCAAAGCCTTGGGAGCTGCACCATTAGCAAGGACTC < 41bp 1 0.391610416195091 1 0.198745101690292 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128830517 chr10:128830505 synonymous SNV . 0 9 hm5C_associated_SNPs_41602 0 0 3 EIF3H POSTAR2 ENCODE chr10:128830400-128830511
64251 chr11 108206584 108206584 1 + C A UCEC 108206601 + 108206581 108206621 41 GACCTGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT GACATGAGACAAGATGCTGTCATGCAACAGGTCTTCCAGAT < 41bp 1 0.170059511085498 1 0.254177987575531 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATM ENSG00000149311 CDS Human protein_coding chr11:108206601 chr11:108206584 nonsynonymous SNV 1.000 5 4 hm5C_associated_SNPs_41603 0 0 4 BUD13 POSTAR2 ENCODE chr11:108206569-108206614
64251 chrX 53223813 53223813 1 - G T UCEC 53223826 - 53223806 53223846 41 GCCCAGTCCACTGGCATCATCGAGCACGGCCTCCTCTACAA GCCCAGTCCACTGGCATCATCGAGCACGGCCTCATCTACAA < 41bp 1 0.545911122923069 1 0.918447375297546 experiment 0.908177754153862 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KDM5C ENSG00000126012 CDS Human protein_coding chrX:53223826 chrX:53223813 synonymous SNV . 0 34 hm5C_associated_SNPs_41606 0 0 12 NOP58 POSTAR2 GSE43666,GSM1067861 chrX:53223794-53223832
64251 chr20 3891319 3891319 1 + G A UCEC 3891322 + 3891302 3891342 41 TTCAATGGACGGTCACAGTGCTATTACTTTGAAAACCCTGC TTCAATGGACGGTCACAATGCTATTACTTTGAAAACCCTGC < 41bp 1 0.10457892035167 1 0.162709653377533 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PANK2 ENSG00000125779 CDS Human protein_coding chr20:3891322 chr20:3891319 synonymous SNV . 0 18 hm5C_associated_SNPs_41607 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:3891229-3891339
64251 chr8 68074128 68074128 1 + G T UCEC 68074141 + 68074121 68074161 41 GTTGACAGCATCATACGTTCCTTTATTCATGTATGTACTTT GTTGACATCATCATACGTTCCTTTATTCATGTATGTACTTT < 41bp 1 0.200524107656767 1 0.0252571403980255 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68074141 chr8:68074128 nonsynonymous SNV 0.999 3 8 hm5C_associated_SNPs_41608 0 0 1 UCHL5 POSTAR2 ENCODE chr8:68074064-68074131
64251 chr16 2122332 2122332 1 + G A UCEC 2122321 + 2122301 2122341 41 TAAAGTGCTCATCTTTACTTCCCCTTGCAGTGTGGACCAGC TAAAGTGCTCATCTTTACTTCCCCTTGCAGTATGGACCAGC < 41bp 1 0.104520724338193 1 0.0332131087779999 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TSC2 ENSG00000103197 CDS Human protein_coding chr16:2122321 chr16:2122332 nonsynonymous SNV 0.871 2 32 hm5C_associated_SNPs_41609 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2122302-2122340
64251 chr20 39795167 39795167 1 + C T UCEC 39795148 + 39795128 39795168 41 GAGCCTGACCAGAGCACAGGCTGAGCACATGCTAATGCGCG GAGCCTGACCAGAGCACAGGCTGAGCACATGCTAATGCGTG < 41bp 1 0.375812616834464 1 0.166874259710312 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39795148 chr20:39795167 synonymous SNV . 0 40 hm5C_associated_SNPs_41610 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:39795161-39795192
64251 chr16 81053857 81053857 1 + G A UCEC 81053845 + 81053825 81053865 41 CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC CCGTACGCCTTCACGTCCTCCTCCATGCTGAGACGCAATAC < 41bp 1 0.790586745857239 1 0.856892943382263 experiment 0.418826508285522 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPN ENSG00000166451 CDS Human protein_coding chr16:81053845 chr16:81053857 synonymous SNV . 0 33 hm5C_associated_SNPs_41611 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:81053833-81053862
64251 chr6 33653602 33653602 1 + C T UCEC 33653599 + 33653579 33653619 41 GTGAGAACCACAACCGGGACCTGCAGGTGAGTGCCTCGCCA GTGAGAACCACAACCGGGACCTGTAGGTGAGTGCCTCGCCA < 41bp 1 0.458025849009731 1 0.223902702331543 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33653599 chr6:33653602 stopgain 0.977 1 24 hm5C_associated_SNPs_41612 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33653577-33653604
64251 chr4 166259867 166259867 1 + G A UCEC 166259885 + 166259865 166259905 41 CTGCATAGACTCTTACACCACAAAAGAATATACAAGTATAT CTACATAGACTCTTACACCACAAAAGAATATACAAGTATAT < 41bp 1 0.509924774029577 1 0.165877044200897 experiment 0.980150451940846 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166259885 chr4:166259867 synonymous SNV . 0 3 hm5C_associated_SNPs_41613 0 0 12 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:166259844-166259867
64251 chr11 65402529 65402529 1 + G A UCEC 65402544 + 65402524 65402564 41 TTGCCGACATGGACCTGCTTCACCGCGTTGTGGCGCCTGGG TTGCCAACATGGACCTGCTTCACCGCGTTGTGGCGCCTGGG < 41bp 1 0.26173546802241 1 0.116613000631332 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402544 chr11:65402529 nonsynonymous SNV 0.988 4 6 hm5C_associated_SNPs_41614 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402514-65402550
64251 chr2 135883791 135883791 1 + G T UCEC 135883796 + 135883776 135883816 41 CCTCATCTGACCGAAGGGATCATTGTGGATAATGATGTTTA CCTCATCTGACCGAATGGATCATTGTGGATAATGATGTTTA < 41bp 1 0.142176997658317 1 0.0930217206478119 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135883796 chr2:135883791 nonsynonymous SNV 0.990 4 16 hm5C_associated_SNPs_41615 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:135883779-135883805
64251 chr1 45808595 45808595 1 + G T UCEC 45808600 + 45808580 45808620 41 ATCCTTCCAGCATGAGGGACCATATTGATTACCGCTGCTGC ATCCTTCCAGCATGATGGACCATATTGATTACCGCTGCTGC < 41bp 1 0.106645491866392 1 0.0215809941291809 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808600 chr1:45808595 nonsynonymous SNV 0.944 2 16 hm5C_associated_SNPs_41617 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:45808574-45808630
64251 chr3 49742510 49742510 1 + C A UCEC 49742520 + 49742500 49742540 41 CAACCGCTTCCTCAGCACAGCGGCTGTGAGCCTCATGACCC CAACCGCTTCATCAGCACAGCGGCTGTGAGCCTCATGACCC < 41bp 1 0.441984577554233 1 0.260640323162079 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742520 chr3:49742510 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_41619 0 0 3 BUD13 POSTAR2 ENCODE chr3:49742485-49742526
64251 chr20 52824657 52824657 1 + G T UCEC 52824647 + 52824627 52824667 41 GTCCAGTCCCAAGATGGCGGCCACCATGAAGAAGGCGGTGA GTCCAGTCCCAAGATGGCGGCCACCATGAATAAGGCGGTGA < 41bp 1 0.253523821293848 1 0.0418843626976013 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52824647 chr20:52824657 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_41621 0 0 6 GRWD1 POSTAR2 ENCODE chr20:52824646-52824663
64251 chr16 2284212 2284212 1 + C T UCEC 2284209 + 2284189 2284229 41 TGCGCGCAGTGTGGCAAGGCCTTCCCCAAGGCCTACCTGCT TGCGCGCAGTGTGGCAAGGCCTTTCCCAAGGCCTACCTGCT < 41bp 1 0.0229689254079671 1 0.0454350709915161 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284209 chr16:2284212 synonymous SNV . 0 24 hm5C_associated_SNPs_41622 0 0 1 PPIG POSTAR2 ENCODE chr16:2284171-2284219
64251 chr9 134354739 134354739 1 + G A UCEC 134354743 + 134354723 134354763 41 GACGTGACCGTGCCTGGCAGCAGCCTGGGCACTGAGATCTG GACGTGACCGTGCCTGACAGCAGCCTGGGCACTGAGATCTG < 41bp 1 0.31557199151978 1 0.220277726650238 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2B ENSG00000130723 CDS Human protein_coding chr9:134354743 chr9:134354739 nonsynonymous SNV 0.504 2 17 hm5C_associated_SNPs_41623 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr9:134354695-134354772
64251 chr1 109806291 109806291 1 + G A UCEC 109806280 + 109806260 109806300 41 GCAGCAGCCTGGTGGCCTGGCATGGCCTCTCGCTGCCCATC GCAGCAGCCTGGTGGCCTGGCATGGCCTCTCACTGCCCATC < 41bp 1 0.276992385336399 1 0.162453472614288 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806280 chr1:109806291 synonymous SNV . 0 32 hm5C_associated_SNPs_41626 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:109806279-109806335
64251 chr1 43827938 43827938 1 + G T UCEC 43827926 + 43827906 43827946 41 TCTCAGGCCATGGCTTTGCACAGAACCAGCTAGTTATTTGG TCTCAGGCCATGGCTTTGCACAGAACCAGCTATTTATTTGG < 41bp 1 0.705562574741504 1 0.222673386335373 experiment 0.588874850516993 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC20 ENSG00000117399 CDS Human protein_coding chr1:43827926 chr1:43827938 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_41627 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:43827926-43827949
64251 chr3 9775917 9775917 1 + C T UCEC 9775905 + 9775885 9775925 41 TACGAGTGCCCGGTGGAGACCTGCCGAAAGGTCTACAAGAG TACGAGTGCCCGGTGGAGACCTGCCGAAAGGTTTACAAGAG < 41bp 1 0.409257117241261 1 0.484197020530701 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775905 chr3:9775917 synonymous SNV . 0 33 hm5C_associated_SNPs_41628 0 0 1 ZNF622 POSTAR2 ENCODE chr3:9775830-9775920
64251 chr4 107268735 107268735 1 + G T UCEC 107268727 + 107268707 107268747 41 CTAAGAAGAAGATTTGGGAGCAGATCCAGCCTGATCTTCAC CTAAGAAGAAGATTTGGGAGCAGATCCATCCTGATCTTCAC < 41bp 1 0.3967627880705 1 0.108632922172546 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107268727 chr4:107268735 nonsynonymous SNV 0.918 4 29 hm5C_associated_SNPs_41629 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:107268689-107268740
64251 chr19 45493759 45493759 1 + C T UCEC 45493744 + 45493724 45493764 41 CAGTCATTCGTGGTCCTCCTCTACATCCTGGACAACGAGAC CAGTCATTCGTGGTCCTCCTCTACATCCTGGACAATGAGAC < 41bp 1 0.649040911585395 1 0.720036268234253 experiment 0.701918176829209 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493744 chr19:45493759 synonymous SNV . 0 36 hm5C_associated_SNPs_41630 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr19 45493759 45493759 1 + C T UCEC 45493756 + 45493736 45493776 41 GTCCTCCTCTACATCCTGGACAACGAGACCAACTTCGTGGT GTCCTCCTCTACATCCTGGACAATGAGACCAACTTCGTGGT < 41bp 1 0.253695918392514 1 0.0227035582065582 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493756 chr19:45493759 synonymous SNV . 0 24 hm5C_associated_SNPs_41631 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr19 45493759 45493759 1 + C T UCEC 45493765 + 45493745 45493785 41 TACATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAG TACATCCTGGACAATGAGACCAACTTCGTGGTCCAGGTCAG < 41bp 1 0.348777132552503 1 0.0284381806850433 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45493765 chr19:45493759 synonymous SNV . 0 15 hm5C_associated_SNPs_41632 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45493700-45493760
64251 chr2 71651113 71651113 1 + C A UCEC 71651115 + 71651095 71651135 41 GAGATATAACAAAACAATCTCAGGAAACAGAGGCTAGACCT GAGATATAACAAAACAATATCAGGAAACAGAGGCTAGACCT < 41bp 1 0.785850514149287 1 0.885466158390045 experiment 0.428298971701427 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71651115 chr2:71651113 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_41633 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71651072-71651160
64251 chr5 158695984 158695984 1 + G A UCEC 158695994 + 158695974 158696014 41 CACACTTTCAGAAGATGATACTGTGCTCGATCTCAAACAGT CACACTTTCAAAAGATGATACTGTGCTCGATCTCAAACAGT < 41bp 1 0.301608523077707 1 0.0556452572345734 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158695994 chr5:158695984 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_41634 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:158695960-158695987
64251 chr10 35854954 35854954 1 + C T UCEC 35854964 + 35854944 35854984 41 TTTGCAGGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTG TTTGCAGGAATGAGCTAGAGCGACAGTTTCTTGAATTGCTG < 41bp 1 0.627575311857442 1 0.300900012254715 experiment 0.744849376285115 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNY ENSG00000108100 CDS Human protein_coding chr10:35854964 chr10:35854954 synonymous SNV . 0 11 hm5C_associated_SNPs_41635 0 0 3 U2AF2 POSTAR2 ENCODE chr10:35854939-35854981
64251 chr6 44121509 44121509 1 + C A UCEC 44121489 + 44121469 44121509 41 TACCTGCCGGCCAAGCTGGACAAGAAGATCCACTCGGGGGC TACCTGCCGGCCAAGCTGGACAAGAAGATCCACTCGGGGGA < 41bp 1 0.724741191028448 1 0.371542751789093 experiment 0.550517617943103 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44121489 chr6:44121509 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_41636 0 0 2 DROSHA POSTAR2 ENCODE chr6:44121474-44121524
64251 chr8 42226801 42226801 1 + C T UCEC 42226797 + 42226777 42226817 41 TGTTCATTTTAGGGTGTTTGCCAGCTTCCCAGTAAAAATGA TGTTCATTTTAGGGTGTTTGCCAGTTTCCCAGTAAAAATGA < 41bp 1 0.37781735440952 1 0.252597749233246 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLB ENSG00000070501 CDS Human protein_coding chr8:42226797 chr8:42226801 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_41637 0 0 1 IGF2BP1 POSTAR2 ENCODE chr8:42226788-42226817
64251 chr1 155032755 155032755 1 + T C UCEC 155032751 + 155032731 155032771 41 GTCCTGGTGATGCTTGGTGCCAGCTACTGGTACCGTGCCCG GTCCTGGTGATGCTTGGTGCCAGCCACTGGTACCGTGCCCG < 41bp 1 0.478897095913898 1 0.440146803855896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155032751 chr1:155032755 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_41638 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155032744-155032779
64251 chr6 35392250 35392250 1 + C T UCEC 35392256 + 35392236 35392276 41 CAGTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGC CAGTGGAGACCGTGTGGGAGCTCACTGAGTTCGCCAAGAGC < 41bp 1 0.223860957145234 1 0.160628527402878 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392256 chr6:35392250 nonsynonymous SNV 0.844 4 15 hm5C_associated_SNPs_41640 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr6 35392250 35392250 1 + C T UCEC 35392258 + 35392238 35392278 41 GTGGAGACCGTGCGGGAGCTCACTGAGTTCGCCAAGAGCAT GTGGAGACCGTGTGGGAGCTCACTGAGTTCGCCAAGAGCAT < 41bp 1 0.478256050077637 1 0.164636224508286 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPARD ENSG00000112033 CDS Human protein_coding chr6:35392258 chr6:35392250 nonsynonymous SNV 0.844 4 13 hm5C_associated_SNPs_41641 0 0 2 RBM15 POSTAR2 ENCODE chr6:35392204-35392286
64251 chr11 85977211 85977211 1 + G T UCEC 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATTAA < 41bp 1 0.161884874173062 1 0.116541057825089 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977211 nonsynonymous SNV 1.000 0 39 hm5C_associated_SNPs_41642 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr11:85977190-85977223
64251 chr18 56063409 56063409 1 + C A UCEC 56063414 + 56063394 56063434 41 TGCAGCTTTAATCGCCTTGACTTACCTCCATATGAAACCTT TGCAGCTTTAATCGCATTGACTTACCTCCATATGAAACCTT < 41bp 1 0.042279831757312 1 0.0859885811805725 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:56063414 chr18:56063409 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_41643 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr18:56063398-56063428
64251 chr4 148555323 148555323 1 + G A UCEC 148555322 + 148555302 148555342 41 GAAAACTTTATATTAAAGGACGGACAGTCAGGGGACATCCC GAAAACTTTATATTAAAGGACAGACAGTCAGGGGACATCCC < 41bp 1 0.117829364234517 1 0.0838279128074646 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555322 chr4:148555323 nonsynonymous SNV 0.052 2 22 hm5C_associated_SNPs_41645 0 0 1 BUD13 POSTAR2 ENCODE chr4:148555262-148555341
64251 chr7 99751549 99751549 1 + A T UCEC 99751531 + 99751511 99751551 41 TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGTAG < 41bp 1 0.704817593713051 1 0.582604885101318 experiment 0.590364812573898 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751531 chr7:99751549 stopgain 1.000 1 39 hm5C_associated_SNPs_41646 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:99751496-99751552
64251 chr7 99751549 99751549 1 + A T UCEC 99751560 + 99751540 99751580 41 TTTGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCCCATTGA TTTGTGGTGTAGAGGCAGAACCGAGGTCGGGAGCCCATTGA < 41bp 1 0.726585532908045 1 0.480389088392258 experiment 0.54682893418391 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751560 chr7:99751549 stopgain 1.000 1 10 hm5C_associated_SNPs_41647 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:99751496-99751552
64251 chr8 48885491 48885491 1 + C T UCEC 48885502 + 48885482 48885522 41 ACCTGGTCGCACTGTACTACCAGAGCGAGGAGCAGGCAGAG ACCTGGTCGTACTGTACTACCAGAGCGAGGAGCAGGCAGAG < 41bp 1 0.738088096922618 1 0.391317218542099 experiment 0.523823806154764 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48885502 chr8:48885491 nonsynonymous SNV 0.368 1 10 hm5C_associated_SNPs_41648 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:48885458-48885493
64251 chr11 111863187 111863187 1 + C T UCEC 111863173 + 111863153 111863193 41 GAGATTGACTCAGCAGGACACATCTGTTCTTCAGCTCAAAC GAGATTGACTCAGCAGGACACATCTGTTCTTCAGTTCAAAC < 41bp 1 0.134117735110617 1 0.0365367829799652 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111863173 chr11:111863187 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_41649 0 0 3 BUD13 POSTAR2 ENCODE chr11:111863133-111863192
64251 chr2 74086421 74086421 1 + T C UCEC 74086431 + 74086411 74086451 41 AGTGTCGACCTACACACTCACTGCTCTTACCAGATGATGTT AGTGTCGACCCACACACTCACTGCTCTTACCAGATGATGTT < 41bp 1 0.463580022045016 1 0.0701512694358826 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74086431 chr2:74086421 nonsynonymous SNV 0.747 3 11 hm5C_associated_SNPs_41650 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:74086410-74086441
64251 chr16 67575951 67575951 1 + C T UCEC 67575945 + 67575925 67575965 41 CCAAGTTGCCTTCCGCAGGCCTGAGACCCCCAGCTCTGGGC CCAAGTTGCCTTCCGCAGGCCTGAGATCCCCAGCTCTGGGC < 41bp 1 0.562462455478097 1 0.067734956741333 experiment 0.875075089043805 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575945 chr16:67575951 nonsynonymous SNV 0.029 1 27 hm5C_associated_SNPs_41651 0 0 1 FXR2 POSTAR2 ENCODE chr16:67575929-67575989
64251 chr1 39851485 39851485 1 + C A UCEC 39851491 + 39851471 39851511 41 CGAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTCTCAG CGAGGTTAAGGAGGATCAGACACTGTGCGATGAACTCTCAG < 41bp 1 0.167973086898995 1 0.136606693267822 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851491 chr1:39851485 nonsynonymous SNV 0.991 4 15 hm5C_associated_SNPs_41652 0 0 1 FXR2 POSTAR2 ENCODE chr1:39851462-39851518
64251 chr12 122623378 122623378 1 + C A UCEC 122623396 + 122623376 122623416 41 TGCTCCCTGCCACGGGAGTCCCCGTTACCCGGCGCCAGTTT TGATCCCTGCCACGGGAGTCCCCGTTACCCGGCGCCAGTTT < 41bp 1 0.187289956524819 1 0.0627383291721344 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122623396 chr12:122623378 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_41653 0 0 5 DDX24 POSTAR2 ENCODE chr12:122623359-122623396
64251 chr12 122255115 122255115 1 + C T UCEC 122255128 + 122255108 122255148 41 TCAAGGTCAAGAGGAAGGAGCCACCAGACACCACCTCATCT TCAAGGTTAAGAGGAAGGAGCCACCAGACACCACCTCATCT < 41bp 1 0.0305042637692219 1 0.0925533175468445 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122255128 chr12:122255115 synonymous SNV . 0 8 hm5C_associated_SNPs_41654 0 0 1 FXR2 POSTAR2 ENCODE chr12:122255111-122255187
64251 chr16 29821422 29821422 1 + C T UCEC 29821428 + 29821408 29821448 41 GGTTTGTCCAATGGCGGCGGCAGCGGCAGCGGCGGCAGCGG GGTTTGTCCAATGGTGGCGGCAGCGGCAGCGGCGGCAGCGG < 41bp 1 0.776618762980564 1 0.505020797252655 experiment 0.446762474038873 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MAZ ENSG00000103495 CDS Human protein_coding chr16:29821428 chr16:29821422 nonsynonymous SNV 0.674 2 15 hm5C_associated_SNPs_41655 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr16:29821395-29821424
64251 chr1 180064827 180064827 1 + C T UCEC 180064828 + 180064808 180064848 41 AAAAATAAGGCAGAAGAAACCATTGTACCTCTAATGGCAGA AAAAATAAGGCAGAAGAAATCATTGTACCTCTAATGGCAGA < 41bp 1 0.115557247994516 1 0.328599214553833 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180064828 chr1:180064827 nonsynonymous SNV 0.986 0 20 hm5C_associated_SNPs_41662 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:180064801-180064832
64251 chr21 47986587 47986587 1 + T G UCEC 47986588 + 47986568 47986608 41 ATCCGAGCACACAGGAGCATCGCTGAGTGGTAAGAGCCCAG ATCCGAGCACACAGGAGCAGCGCTGAGTGGTAAGAGCCCAG < 41bp 1 0.281425882126049 1 0.227800011634827 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47986588 chr21:47986587 nonsynonymous SNV 0.981 2 20 hm5C_associated_SNPs_41663 0 0 2 PPIG POSTAR2 ENCODE chr21:47986560-47986588
64251 chr2 113260562 113260562 1 + C A UCEC 113260557 + 113260537 113260577 41 GGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATA GGGTGTGCTTCGGACTGCTTCAGAAACATATCATGTTGATA < 41bp 1 0.529682514064647 1 0.500202476978302 experiment 0.940634971870706 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113260557 chr2:113260562 nonsynonymous SNV 0.996 2 26 hm5C_associated_SNPs_41664 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:113260531-113260563
64251 chr19 16296485 16296485 1 + G T UCEC 16296488 + 16296468 16296508 41 ACTCCTGGAAGCAATGGGAACGAGCAAAAAGAACGAGGAGG ACTCCTGGAAGCAATGGTAACGAGCAAAAAGAACGAGGAGG < 41bp 1 0.647647334463699 1 0.606327295303345 experiment 0.704705331072602 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FAM32A ENSG00000105058 CDS Human protein_coding chr19:16296488 chr19:16296485 nonsynonymous SNV 0.984 0 18 hm5C_associated_SNPs_41665 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:16296453-16296486
64251 chr3 100059959 100059959 1 + G A UCEC 100059974 + 100059954 100059994 41 CACCTGTGCTGTGTTTGGGCCTGATGGAACTTTACTAGCAA CACCTATGCTGTGTTTGGGCCTGATGGAACTTTACTAGCAA < 41bp 1 0.395606388268192 1 0.108839780092239 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NIT2 ENSG00000114021 CDS Human protein_coding chr3:100059974 chr3:100059959 nonsynonymous SNV 0.971 4 6 hm5C_associated_SNPs_41666 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:100059952-100059985
64251 chr3 4856217 4856217 1 + G T UCEC 4856235 + 4856215 4856255 41 TAGGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA TATGAGATGTACTCAGGAAGCCGTCCAAAGAGGTAAATTAA < 41bp 1 0.0455194813962601 1 0.448493987321854 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4856235 chr3:4856217 stopgain 0.998 1 3 hm5C_associated_SNPs_41667 0 0 1 DDX24 POSTAR2 ENCODE chr3:4856217-4856241
64251 chr15 43632483 43632483 1 + A C UCEC 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC AGATGTCATAAACGAATTTGCAGATGACGGCGTCAAGTACC < 41bp 1 0.503472669373406 1 0.483913153409958 experiment 0.993054661253188 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632483 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_41668 0 0 2 DDX24 POSTAR2 ENCODE chr15:43632468-43632527
64251 chr22 38201758 38201758 1 + G A UCEC 38201755 + 38201735 38201775 41 GAGAACGCTGACTCGCAGATCAAGTTGTCCATCAAGCGCCT GAGAACGCTGACTCGCAGATCAAATTGTCCATCAAGCGCCT < 41bp 1 0.276338347365862 1 0.200383365154266 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201755 chr22:38201758 synonymous SNV . 0 24 hm5C_associated_SNPs_41669 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:38201725-38201761
64251 chr3 49052386 49052386 1 + G A UCEC 49052377 + 49052357 49052397 41 GCAGTGAAGATGGATCCCTCCATGTCTTCGTGCTTGCTGTG GCAGTGAAGATGGATCCCTCCATGTCTTCATGCTTGCTGTG < 41bp 1 0.216262132696634 1 0.0619321763515472 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49052377 chr3:49052386 nonsynonymous SNV 0.037 0 30 hm5C_associated_SNPs_41671 0 0 18 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:49052340-49052400
64251 chr7 142991814 142991814 1 + T G UCEC 142991795 + 142991775 142991815 41 GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTC GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCGC < 41bp 1 0.780603294663032 1 0.668518841266632 experiment 0.438793410673937 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991795 chr7:142991814 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_41672 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:142991792-142991821
64251 chr11 46400051 46400051 1 + G A UCEC 46400038 + 46400018 46400058 41 ATTGAGGCTGCCAAGAGGAACGACTTCTGTAAGGTACTAGC ATTGAGGCTGCCAAGAGGAACGACTTCTGTAAGATACTAGC < 41bp 1 0.156403238297425 1 0.445477545261383 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 splicing Human protein_coding chr11:46400038 chr11:46400051 . 0.971 0 34 hm5C_associated_SNPs_41673 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:46400040-46400060
64251 chr16 29828323 29828323 1 + G A UCEC 29828307 + 29828287 29828327 41 ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAAGAAA < 41bp 1 0.376808886776886 1 0.726247608661652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828307 chr16:29828323 synonymous SNV . 0 37 hm5C_associated_SNPs_41674 0 0 2 PRPF8 POSTAR2 ENCODE chr16:29828321-29828388
64251 chr1 32680484 32680484 1 - G T UCEC 32680487 - 32680467 32680507 41 TTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAA TTGCTTCTTGGCTGAATGGTCTGATGGGGTCTGGCATAGAA < 41bp 1 0.448332243789976 1 0.233003228902817 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32680487 chr1:32680484 nonsynonymous SNV 0.891 0 24 hm5C_associated_SNPs_41676 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32680460-32680499
64251 chr12 56504367 56504367 1 + A G UCEC 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGAGAACCGCTATTTACAAACGAGACCCCTCTAAACA < 41bp 1 0.390486987976527 1 0.436355412006378 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504367 nonsynonymous SNV 0.998 1 13 hm5C_associated_SNPs_41677 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr16 731820 731820 1 + C T UCEC 731817 + 731797 731837 41 CTGGAAGAGTGCCAGCGAAACCACGAGGGTGATGAGGACGA CTGGAAGAGTGCCAGCGAAACCATGAGGGTGATGAGGACGA < 41bp 1 0.202559604461186 1 0.108296066522598 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STUB1 ENSG00000103266 CDS Human protein_coding chr16:731817 chr16:731820 synonymous SNV . 0 24 hm5C_associated_SNPs_41678 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr16:731813-731838
64251 chr5 92923708 92923708 1 + C T UCEC 92923717 + 92923697 92923737 41 AACGGCCACTGCTACCTGTCCGGCTACATCTCGCTGCTGCT AACGGCCACTGTTACCTGTCCGGCTACATCTCGCTGCTGCT < 41bp 1 0.293953329888808 1 0.312545627355576 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92923717 chr5:92923708 synonymous SNV . 0 12 hm5C_associated_SNPs_41680 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr5:92923700-92923720
64251 chr20 279029 279029 1 + G T UCEC 279018 + 278998 279038 41 CATCCTCTTCCGGAACGAGACGGTGGACGTGGAGGACATTG CATCCTCTTCCGGAACGAGACGGTGGACGTGTAGGACATTG < 41bp 1 0.595190065661058 1 0.475616842508316 experiment 0.809619868677883 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZCCHC3 ENSG00000177764 CDS Human other chr20:279018 chr20:279029 stopgain 1.000 0 32 hm5C_associated_SNPs_41681 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:279000-279060
64251 chr3 122419860 122419860 1 + T C UCEC 122419849 + 122419829 122419869 41 GACTTGGCACGGCTTCCTGTCGATGTGGTGGTGAATGCATC GACTTGGCACGGCTTCCTGTCGATGTGGTGGCGAATGCATC < 41bp 1 0.31407172215286 1 0.502550065517426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419849 chr3:122419860 nonsynonymous SNV 0.082 4 32 hm5C_associated_SNPs_41682 0 0 1 FXR2 POSTAR2 ENCODE chr3:122419812-122419860
64251 chr7 148979318 148979318 1 + C A UCEC 148979322 + 148979302 148979342 41 CAACCGCAACCACCACCTGGCCGTGCACATGCAGACCCACG CAACCGCAACCACCACATGGCCGTGCACATGCAGACCCACG < 41bp 1 0.0700326003502959 1 0.0361860990524292 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148979322 chr7:148979318 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_41683 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr7:148979317-148979318
64251 chr11 86947693 86947693 1 + G T UCEC 86947706 + 86947686 86947726 41 TTGTTTTGCATCACAGCTGCCATGTACATGTTCTTTTTCAG TTGTTTTTCATCACAGCTGCCATGTACATGTTCTTTTTCAG < 41bp 1 0.0453505374486022 1 0.042749434709549 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86947706 chr11:86947693 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_41685 0 0 4 GRWD1 POSTAR2 ENCODE chr11:86947684-86947708
64251 chr20 42089377 42089377 1 + C G UCEC 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTGG < 41bp 1 0.46614030768295 1 0.419936299324036 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089377 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_41686 0 0 4 U2AF2 POSTAR2 ENCODE chr20:42089330-42089380
64251 chr5 132400704 132400704 1 + C T UCEC 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TCGTTTAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC < 41bp 1 0.481455697847025 1 0.489507347345352 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400704 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_41688 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132400683-132400729
64251 chrX 47101580 47101580 1 + G A UCEC 47101578 + 47101558 47101598 41 CAAGTCCACGCTGGTGTGCCCCGATTGTGGCAATGTATCTG CAAGTCCACGCTGGTGTGCCCCAATTGTGGCAATGTATCTG < 41bp 1 0.0825929258083727 1 0.0674139559268951 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP11 ENSG00000102226 CDS Human protein_coding chrX:47101578 chrX:47101580 nonsynonymous SNV 0.979 3 23 hm5C_associated_SNPs_41689 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47101559-47101588
64251 chr1 10435346 10435346 1 + C T UCEC 10435355 + 10435335 10435375 41 GCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTCAATGAC GCACAAAGCACTGTGGGGTCCTTTTGCAGGCCCTCAATGAC < 41bp 1 0.0386004963593578 1 0.062830924987793 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10435355 chr1:10435346 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_41693 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:10435346-10435347
64251 chr20 25198139 25198139 1 + G A UCEC 25198155 + 25198135 25198175 41 CAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC CAGGACACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC < 41bp 1 0.116671054457096 1 0.0753320753574371 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25198155 chr20:25198139 nonsynonymous SNV 0.162 0 5 hm5C_associated_SNPs_41694 0 0 3 GRWD1 POSTAR2 ENCODE chr20:25198137-25198174
64251 chr5 110439989 110439989 1 + G A UCEC 110439992 + 110439972 110440012 41 ACTCTACAGCAATTGCCGGACTGACATTTCTCCATAGAGAG ACTCTACAGCAATTGCCAGACTGACATTTCTCCATAGAGAG < 41bp 1 0.390994566018732 1 0.253472864627838 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient WDR36 ENSG00000134987 CDS Human protein_coding chr5:110439992 chr5:110439989 nonsynonymous SNV 0.994 3 18 hm5C_associated_SNPs_41695 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:110439965-110440005
64251 chr19 49993826 49993826 1 + C T UCEC 49993825 + 49993805 49993845 41 CAGCCGCATCTTCTGGCGGACCGTGCGAGGTGAGCAGAGCG CAGCCGCATCTTCTGGCGGACTGTGCGAGGTGAGCAGAGCG < 41bp 1 0.347156113302824 1 0.232163906097412 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL13A ENSG00000142541 CDS Human protein_coding chr19:49993825 chr19:49993826 synonymous SNV . 0 22 hm5C_associated_SNPs_41697 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49993732-49993834
64251 chr6 44221300 44221300 1 + G A UCEC 44221288 + 44221268 44221308 41 CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGAT CAGTTCCTGATGAGATCCCCCCTCTCGAGGGCAATGAGGAT < 41bp 1 0.0431993846448436 1 0.0520859360694885 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221288 chr6:44221300 nonsynonymous SNV 0.612 0 33 hm5C_associated_SNPs_41698 0 0 48 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr6 44221300 44221300 1 + G A UCEC 44221289 + 44221269 44221309 41 AGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATG AGTTCCTGATGAGATCCCCCCTCTCGAGGGCAATGAGGATG < 41bp 1 0.262744691981284 1 0.237962126731873 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221289 chr6:44221300 nonsynonymous SNV 0.612 0 32 hm5C_associated_SNPs_41699 0 0 48 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44221223-44221534
64251 chr11 47602091 47602091 1 + C T UCEC 47602077 + 47602057 47602097 41 AATATGCCTTTTCCTTCCAGCCACTGTCAGACCACGGAATG AATATGCCTTTTCCTTCCAGCCACTGTCAGACCATGGAATG < 41bp 1 0.186558951834566 1 0.0551910996437073 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47602077 chr11:47602091 nonsynonymous SNV 0.969 0 35 hm5C_associated_SNPs_41700 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr11:47602086-47602112
64251 chr15 22945054 22945054 1 + G A UCEC 22945057 + 22945037 22945077 41 CAGGTGGTCACGGGCTCGGGCCGCCAGGAGGCCCAGAAGAC CAGGTGGTCACGGGCTCAGGCCGCCAGGAGGCCCAGAAGAC < 41bp 1 0.225578501924787 1 0.403597444295883 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22945057 chr15:22945054 synonymous SNV . 0 18 hm5C_associated_SNPs_41701 0 0 5 BUD13 POSTAR2 ENCODE chr15:22944994-22945076
64251 chr21 45733850 45733850 1 + C A UCEC 45733862 + 45733842 45733882 41 TTCATCCCCGAGGCTCCACCCGAGGACGGCTGGGAGAACTT TTCATCCCAGAGGCTCCACCCGAGGACGGCTGGGAGAACTT < 41bp 1 0.671565438405789 1 0.845573544502258 experiment 0.656869123188422 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PFKL ENSG00000141959 CDS Human protein_coding chr21:45733862 chr21:45733850 synonymous SNV . 0 9 hm5C_associated_SNPs_41702 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr21:45733845-45733858
64251 chrX 153663648 153663648 1 + G C UCEC 153663636 + 153663616 153663656 41 CCAGGTTCATTCTGGCCAACCGCCTCTACCCAGTGTCTGCC CCAGGTTCATTCTGGCCAACCGCCTCTACCCACTGTCTGCC < 41bp 1 0.398828778907708 1 0.0971961617469788 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663636 chrX:153663648 nonsynonymous SNV 0.999 1 33 hm5C_associated_SNPs_41703 0 0 8 IGF2BP1 POSTAR2 ENCODE chrX:153663637-153663692
64251 chr5 7885889 7885889 1 + C A UCEC 7885875 + 7885855 7885895 41 GATCTGCCCTAACAGTGATTCTGAGGTACAAAGCCTACTCC GATCTGCCCTAACAGTGATTCTGAGGTACAAAGCATACTCC < 41bp 1 0.742248262006011 1 0.733940422534943 experiment 0.515503475987978 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885875 chr5:7885889 nonsynonymous SNV 0.004 3 35 hm5C_associated_SNPs_41704 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885872-7885909
64251 chr17 37358661 37358661 1 + G A UCEC 37358657 + 37358637 37358677 41 GGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCA GGCTCGATGCCGGAAAAACACCTTAGCCCGCCGGAAGGGCA < 41bp 1 0.343308576183798 1 0.0416496694087982 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358657 chr17:37358661 synonymous SNV . 0 25 hm5C_associated_SNPs_41706 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358661 37358661 1 + G A UCEC 37358663 + 37358643 37358683 41 ATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACA ATGCCGGAAAAACACCTTAGCCCGCCGGAAGGGCAGGCACA < 41bp 1 0.268056613206942 1 0.0618149638175964 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358663 chr17:37358661 synonymous SNV . 0 19 hm5C_associated_SNPs_41707 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358661 37358661 1 + G A UCEC 37358664 + 37358644 37358684 41 TGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACAT TGCCGGAAAAACACCTTAGCCCGCCGGAAGGGCAGGCACAT < 41bp 1 0.326409030525545 1 0.247011244297028 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358664 chr17:37358661 synonymous SNV . 0 18 hm5C_associated_SNPs_41708 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358661 37358661 1 + G A UCEC 37358667 + 37358647 37358687 41 CGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGG CGGAAAAACACCTTAGCCCGCCGGAAGGGCAGGCACATGGG < 41bp 1 0.769449664005541 1 0.49298170208931 experiment 0.461100671988917 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358667 chr17:37358661 synonymous SNV . 0 15 hm5C_associated_SNPs_41709 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358661 37358661 1 + G A UCEC 37358668 + 37358648 37358688 41 GGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCACATGGGC GGAAAAACACCTTAGCCCGCCGGAAGGGCAGGCACATGGGC < 41bp 1 0.760825646474451 1 0.766160070896149 experiment 0.478348707051097 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358668 chr17:37358661 synonymous SNV . 0 14 hm5C_associated_SNPs_41710 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr17 37358661 37358661 1 + G A UCEC 37358680 + 37358660 37358700 41 TGGCCCGCCGGAAGGGCAGGCACATGGGCATAGGTAAGTGT TAGCCCGCCGGAAGGGCAGGCACATGGGCATAGGTAAGTGT < 41bp 1 0.299856082072505 1 0.145772457122803 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358680 chr17:37358661 synonymous SNV . 0 2 hm5C_associated_SNPs_41711 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr19 42373177 42373177 1 + G T UCEC 42373186 + 42373166 42373206 41 GGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAG GGGGGACGTCATAGAAACGGCGTCATGCCCAGCCACTTCAG < 41bp 1 0.614710971293152 1 0.389224916696548 experiment 0.770578057413695 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373186 chr19:42373177 stopgain 1.000 2 12 hm5C_associated_SNPs_41713 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373177 42373177 1 + G T UCEC 42373193 + 42373173 42373213 41 GTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC GTCATAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC < 41bp 1 0.245236967655797 1 0.126057147979736 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373193 chr19:42373177 stopgain 1.000 2 5 hm5C_associated_SNPs_41714 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373177 42373177 1 + G T UCEC 42373194 + 42373174 42373214 41 TCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCT TCATAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCT < 41bp 1 0.259472025076371 1 0.108651369810104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373194 chr19:42373177 stopgain 1.000 2 4 hm5C_associated_SNPs_41715 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr17 33310468 33310468 1 + G A UCEC 33310485 + 33310465 33310505 41 AGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGGACCTCA AGAACGGGCCCGGGCCACCACAAAAAAAATCGAGGACCTCA < 41bp 1 0.684605771026172 1 0.531233608722687 experiment 0.630788457947657 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310485 chr17:33310468 synonymous SNV . 0 4 hm5C_associated_SNPs_41717 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:33310445-33310487
64251 chr13 115037788 115037788 1 + C T UCEC 115037793 + 115037773 115037813 41 AGACTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCA AGACTGCAGAAGAAATGGGGCTTACGCCATTGGAAACCTCA < 41bp 1 0.0858067971884619 1 0.0577613413333893 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CDC16 ENSG00000130177 CDS Human protein_coding chr13:115037793 chr13:115037788 nonsynonymous SNV 0.514 1 16 hm5C_associated_SNPs_41719 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:115037780-115037800
64251 chr7 4796802 4796802 1 + G A UCEC 4796801 + 4796781 4796821 41 TCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCAAGGTA TCCTGCTTCCGCACCCCCTTCAGGCCTCTGTCCTCAAGGTA < 41bp 1 0.298901321965019 1 0.678507328033447 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796801 chr7:4796802 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_41721 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:4796778-4796809
64251 chr4 186231909 186231909 1 + C A UCEC 186231908 + 186231888 186231928 41 GAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAG GAATCCGAATCCTGGGAGGCCATGCCTATGACCAGCAAGAG < 41bp 1 0.200891479237794 1 0.269569873809814 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX25 ENSG00000109762 CDS Human protein_coding chr4:186231908 chr4:186231909 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_41723 0 0 2 UCHL5 POSTAR2 ENCODE chr4:186231809-186231948
64251 chr12 57919784 57919784 1 + A C UCEC 57919787 + 57919767 57919807 41 GCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCA GCACTTTACAGGGCCGACGGCCCCGTGCCCAGGCACCCTCA < 41bp 1 0.290278899974723 1 0.667764604091644 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919787 chr12:57919784 synonymous SNV . 0 18 hm5C_associated_SNPs_41724 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919788 + 57919768 57919808 41 CACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAG CACTTTACAGGGCCGACGGCCCCGTGCCCAGGCACCCTCAG < 41bp 1 0.232669288341939 1 0.658067941665649 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919788 chr12:57919784 synonymous SNV . 0 17 hm5C_associated_SNPs_41725 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919789 + 57919769 57919809 41 ACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGC ACTTTACAGGGCCGACGGCCCCGTGCCCAGGCACCCTCAGC < 41bp 1 0.18124529053662 1 0.151373863220215 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919789 chr12:57919784 synonymous SNV . 0 16 hm5C_associated_SNPs_41726 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919790 + 57919770 57919810 41 CTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCT CTTTACAGGGCCGACGGCCCCGTGCCCAGGCACCCTCAGCT < 41bp 1 0.263438326264907 1 0.485591113567352 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919790 chr12:57919784 synonymous SNV . 0 15 hm5C_associated_SNPs_41727 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919794 + 57919774 57919814 41 ACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCC ACAGGGCCGACGGCCCCGTGCCCAGGCACCCTCAGCTTCCC < 41bp 1 0.274124529010929 1 0.149583607912064 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919794 chr12:57919784 synonymous SNV . 0 11 hm5C_associated_SNPs_41728 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919795 + 57919775 57919815 41 CAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA CAGGGCCGACGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA < 41bp 1 0.277689735994096 1 0.0997693836688995 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919795 chr12:57919784 synonymous SNV . 0 10 hm5C_associated_SNPs_41729 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919796 + 57919776 57919816 41 AGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC AGGGCCGACGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC < 41bp 1 0.568308088217957 1 0.857998847961426 experiment 0.863383823564087 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919796 chr12:57919784 synonymous SNV . 0 9 hm5C_associated_SNPs_41730 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919800 + 57919780 57919820 41 CCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT CCGACGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT < 41bp 1 0.203648433187295 1 0.013521671295166 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919800 chr12:57919784 synonymous SNV . 0 5 hm5C_associated_SNPs_41731 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919802 + 57919782 57919822 41 GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA GACGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA < 41bp 1 0.0232918084531045 1 0.00995239615440369 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919802 chr12:57919784 synonymous SNV . 0 3 hm5C_associated_SNPs_41732 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919803 + 57919783 57919823 41 AAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT ACGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT < 41bp 1 0.161734447450916 1 0.0307640433311462 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919803 chr12:57919784 synonymous SNV . 0 2 hm5C_associated_SNPs_41733 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919784 57919784 1 + A C UCEC 57919804 + 57919784 57919824 41 AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC CGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC < 41bp 1 0.462421060947425 1 0.0812933743000031 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919804 chr12:57919784 synonymous SNV . 0 1 hm5C_associated_SNPs_41734 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr16 3117508 3117508 1 + G T UCEC 3117519 + 3117499 3117539 41 GACCCTGGAGGGACAAGGATCCGGCCCTTTGGTGCCAACTC GACCCTGGATGGACAAGGATCCGGCCCTTTGGTGCCAACTC < 41bp 1 0.485125354093641 1 0.479861348867416 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IL32 ENSG00000008517 CDS Human protein_coding chr16:3117519 chr16:3117508 nonsynonymous SNV 0.021 3 10 hm5C_associated_SNPs_41735 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:3117423-3117561
64251 chr1 223943292 223943292 1 + C T UCEC 223943279 + 223943259 223943299 41 TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACTGACGGCG < 41bp 1 0.0689949246507603 1 0.0876302421092987 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943279 chr1:223943292 stopgain 1.000 1 34 hm5C_associated_SNPs_41736 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr1 223943292 223943292 1 + C T UCEC 223943301 + 223943281 223943321 41 TTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGAC TTCAGAAGCACTGACGGCGGCAGAGGAAGATGGGCGAGGAC < 41bp 1 0.681656227313799 1 0.705839931964874 experiment 0.636687545372402 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943301 chr1:223943292 stopgain 1.000 1 12 hm5C_associated_SNPs_41737 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr14 97002279 97002279 1 + T G UCEC 97002283 + 97002263 97002303 41 ATACCCACAACAGAACTCCACGTACAATGTGTCCGTTTCAA ATACCCACAACAGAACGCCACGTACAATGTGTCCGTTTCAA < 41bp 1 0.0766484310602703 1 0.129134148359299 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97002283 chr14:97002279 nonsynonymous SNV 1.000 3 17 hm5C_associated_SNPs_41739 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:97002244-97002352
64251 chr8 87447753 87447753 1 + C T UCEC 87447738 + 87447718 87447758 41 TTTAGGTGGAAGCTTGCTCACTTCCGTTATTTGTGCCAGGT TTTAGGTGGAAGCTTGCTCACTTCCGTTATTTGTGTCAGGT < 41bp 1 0.254721662246247 1 0.0919767618179321 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WWP1 ENSG00000123124 CDS Human protein_coding chr8:87447738 chr8:87447753 synonymous SNV . 0 36 hm5C_associated_SNPs_41740 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:87447720-87447754
64251 chr7 94917919 94917919 1 + G A UCEC 94917917 + 94917897 94917937 41 CCGTTCAGGAATGGAGTGTGCAGCAGGTTTCTCACTGGTTA CCGTTCAGGAATGGAGTGTGCAACAGGTTTCTCACTGGTTA < 41bp 1 0.446392850277473 1 0.0900022387504578 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917917 chr7:94917919 synonymous SNV . 0 23 hm5C_associated_SNPs_41741 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr4 48384726 48384726 1 + T C UCEC 48384732 + 48384712 48384752 41 TATGCATCATGCAGTATACCCTGCTGTTAACAGGTTTTCAC TATGCATCATGCAGCATACCCTGCTGTTAACAGGTTTTCAC < 41bp 1 0.638178143473855 1 0.0590055584907532 experiment 0.72364371305229 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384732 chr4:48384726 nonsynonymous SNV 0.981 0 15 hm5C_associated_SNPs_41743 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:48384722-48384757
64251 chr7 156746931 156746931 1 + G T UCEC 156746911 + 156746891 156746931 41 GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAG GCTCTCATGGGTGCCTGCGTCACTGCCTCGGCCATGCCCAT < 41bp 1 0.520629086643166 1 0.339345991611481 experiment 0.958741826713668 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746911 chr7:156746931 nonsynonymous SNV 0.854 1 41 hm5C_associated_SNPs_41744 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:156746926-156746954
64251 chr19 54377330 54377330 1 + G A UCEC 54377326 + 54377306 54377346 41 CTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTT CTGCTGAAGGTGCTGGAGACCTTCATTGCCTGCATCATCTT < 41bp 1 0.573742630431566 1 0.623627305030823 experiment 0.852514739136867 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377326 chr19:54377330 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_41745 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:54377297-54377349
64251 chr12 56536126 56536126 1 + C A UCEC 56536133 + 56536113 56536153 41 CCTCTCAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACC CCTCTCAGAGCTCATCGTGGCTGACCAGCTCTGCTTGGACC < 41bp 1 0.227376799722003 1 0.0555998384952545 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536133 chr12:56536126 nonsynonymous SNV 0.178 2 14 hm5C_associated_SNPs_41746 0 0 2 RPS3 POSTAR2 ENCODE chr12:56536070-56536126
64251 chr12 56536126 56536126 1 + C A UCEC 56536138 + 56536118 56536158 41 CAGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACCGCTGG CAGAGCTCATCGTGGCTGACCAGCTCTGCTTGGACCGCTGG < 41bp 1 0.399350404347091 1 0.177325695753098 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536138 chr12:56536126 nonsynonymous SNV 0.178 2 9 hm5C_associated_SNPs_41747 0 0 2 RPS3 POSTAR2 ENCODE chr12:56536070-56536126
64251 chr6 27101083 27101083 1 + G A UCEC 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCA < 41bp 1 0.410299953393731 1 0.159987241029739 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101083 nonsynonymous SNV 0.661 4 41 hm5C_associated_SNPs_41750 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr6 27101083 27101083 1 + G A UCEC 27101066 + 27101046 27101086 41 CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCAT CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCACAT < 41bp 1 0.798980371271302 1 0.504397511482239 experiment 0.402039257457395 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101066 chr6:27101083 nonsynonymous SNV 0.661 4 38 hm5C_associated_SNPs_41751 0 0 53 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr17 48631708 48631708 1 + G A UCEC 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TATGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG < 41bp 1 0.0385182147708581 1 0.0193673670291901 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631708 nonsynonymous SNV 0.997 2 2 hm5C_associated_SNPs_41752 0 0 1 LSM11 POSTAR2 ENCODE chr17:48631704-48631807
64251 chr16 29912751 29912751 1 + C T UCEC 29912748 + 29912728 29912768 41 GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG GTGAGCCGGCGGCTTCGGGCCTATGCAAGGCGCTACTCCTG < 41bp 1 0.431225243387685 1 0.193876713514328 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912748 chr16:29912751 synonymous SNV . 0 24 hm5C_associated_SNPs_41753 0 0 1 SND1 POSTAR2 ENCODE chr16:29912711-29912755
64251 chr19 52705261 52705261 1 + G A UCEC 52705272 + 52705252 52705292 41 AAAGGACCCGAAGTGAGCTTCTGCCTTTCCTTACAGGTAAC AAAGGACCCAAAGTGAGCTTCTGCCTTTCCTTACAGGTAAC < 41bp 1 0.278896412362497 1 0.320113122463226 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52705272 chr19:52705261 nonsynonymous SNV 0.980 2 10 hm5C_associated_SNPs_41754 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:52705230-52705262
64251 chr17 48433483 48433483 1 + G A UCEC 48433472 + 48433452 48433492 41 TTCCACACGGTGCTGGAGAACAGCCTGGCCTGTGAGACCCT TTCCACACGGTGCTGGAGAACAGCCTGGCCTATGAGACCCT < 41bp 1 0.388829124941662 1 0.267741173505783 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control XYLT2 ENSG00000015532 CDS Human protein_coding chr17:48433472 chr17:48433483 nonsynonymous SNV 0.995 4 32 hm5C_associated_SNPs_41758 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48433460-48433488
64251 chr22 42301542 42301542 1 + C T UCEC 42301538 + 42301518 42301558 41 TCCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGC TCCTTCCTCTCCTCCCCGGGCCAGTGGGCAGTGCTGCTGGC < 41bp 1 0.258896773465347 1 0.161682993173599 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301538 chr22:42301542 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_41759 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301542 42301542 1 + C T UCEC 42301539 + 42301519 42301559 41 CCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCC CCTTCCTCTCCTCCCCGGGCCAGTGGGCAGTGCTGCTGGCC < 41bp 1 0.366291296610356 1 0.50411856174469 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301539 chr22:42301542 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_41760 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr4 25396323 25396323 1 + G A UCEC 25396309 + 25396289 25396329 41 GTAGTGCTGAACTTCAGACTCTCTTGATGAATCAGTTAACA GTAGTGCTGAACTTCAGACTCTCTTGATGAATCAATTAACA < 41bp 1 0.20059627517003 1 0.110281109809875 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25396309 chr4:25396323 synonymous SNV . 0 35 hm5C_associated_SNPs_41762 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:25396300-25396325
64251 chr12 6879138 6879138 1 + G T UCEC 6879124 + 6879104 6879144 41 TGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGG TGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGATAGGAGG < 41bp 1 0.380178888483959 1 0.27869039773941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6879124 chr12:6879138 stopgain 1.000 0 35 hm5C_associated_SNPs_41763 0 0 50 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr12:6879120-6879140
64251 chr12 6879138 6879138 1 + G T UCEC 6879127 + 6879107 6879147 41 GGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAG GGAGGAAGAAGAAGAAACTGCCGAGGATGGATAGGAGGAAG < 41bp 1 0.401487255442093 1 0.670178651809692 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMS ENSG00000159335 CDS Human protein_coding chr12:6879127 chr12:6879138 stopgain 1.000 0 32 hm5C_associated_SNPs_41764 0 0 50 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr12:6879120-6879140
64251 chr12 6879138 6879138 1 + G T UCEC 6879128 + 6879108 6879148 41 GAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAGA GAGGAAGAAGAAGAAACTGCCGAGGATGGATAGGAGGAAGA < 41bp 1 0.685873531600067 1 0.794931769371033 experiment 0.628252936799867 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6879128 chr12:6879138 stopgain 1.000 0 31 hm5C_associated_SNPs_41765 0 0 50 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr12:6879120-6879140
64251 chr2 3627702 3627702 1 + G A UCEC 3627693 + 3627673 3627713 41 TGCTTACCTTTTAAACTATTCTTTTAGCCGTACTCTGACAG TGCTTACCTTTTAAACTATTCTTTTAGCCATACTCTGACAG < 41bp 1 0.0850283282549033 1 0.0231726467609406 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS7 ENSG00000171863 CDS Human protein_coding chr2:3627693 chr2:3627702 nonsynonymous SNV 0.482 2 30 hm5C_associated_SNPs_41767 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:3627688-3627731
64251 chr19 42373186 42373186 1 + C T UCEC 42373193 + 42373173 42373213 41 GTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC GTCAGAGAAACGGTGTCATGCCCAGCCACTTCAGCCGAGGC < 41bp 1 0.281718117043469 1 0.123301088809967 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373193 chr19:42373186 nonsynonymous SNV 0.990 1 14 hm5C_associated_SNPs_41770 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373186 42373186 1 + C T UCEC 42373194 + 42373174 42373214 41 TCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCT TCAGAGAAACGGTGTCATGCCCAGCCACTTCAGCCGAGGCT < 41bp 1 0.254849635961714 1 0.190955430269241 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373194 chr19:42373186 nonsynonymous SNV 0.990 1 13 hm5C_associated_SNPs_41771 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373186 42373186 1 + C T UCEC 42373198 + 42373178 42373218 41 AGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAA AGAAACGGTGTCATGCCCAGCCACTTCAGCCGAGGCTCCAA < 41bp 1 0.167697793791989 1 0.218566119670868 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373198 chr19:42373186 nonsynonymous SNV 0.990 1 9 hm5C_associated_SNPs_41772 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373186 42373186 1 + C T UCEC 42373199 + 42373179 42373219 41 GAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAG GAAACGGTGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAG < 41bp 1 0.25312967487762 1 0.331703394651413 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373199 chr19:42373186 nonsynonymous SNV 0.990 1 8 hm5C_associated_SNPs_41773 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 13054422 13054422 1 + C T UCEC 13054404 + 13054384 13054424 41 ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGA ATCACCAACGATGAGGCATACGCTGAGGAGTTTGGCAATGA < 41bp 1 0.581617850628549 1 0.0948998928070068 experiment 0.836764298742902 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054404 chr19:13054422 synonymous SNV . 0 39 hm5C_associated_SNPs_41775 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054422 13054422 1 + C T UCEC 13054406 + 13054386 13054426 41 CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAACGAGA CACCAACGATGAGGCATACGCTGAGGAGTTTGGCAATGAGA < 41bp 1 0.684473064250232 1 0.215155065059662 experiment 0.631053871499536 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054406 chr19:13054422 synonymous SNV . 0 37 hm5C_associated_SNPs_41776 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054422 13054422 1 + C T UCEC 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAATGAGACGTGGGGCGTAAC < 41bp 1 0.412209204730871 1 0.298320233821869 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054422 synonymous SNV . 0 24 hm5C_associated_SNPs_41777 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr19 13054422 13054422 1 + C T UCEC 13054427 + 13054407 13054447 41 TGAGGAGTTTGGCAACGAGACGTGGGGCGTAACAAAGGTGA TGAGGAGTTTGGCAATGAGACGTGGGGCGTAACAAAGGTGA < 41bp 1 0.713718766148639 1 0.510590791702271 experiment 0.572562467702721 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054427 chr19:13054422 synonymous SNV . 0 16 hm5C_associated_SNPs_41778 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr7 99722500 99722500 1 + G T UCEC 99722514 + 99722494 99722534 41 GACCGAGAAGATCTTTGACCCTTGCCTTTGAGCCCCCAGGA GACCGATAAGATCTTTGACCCTTGCCTTTGAGCCCCCAGGA < 41bp 1 0.47163126167233 1 0.186144560575485 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99722514 chr7:99722500 stopgain 0.827 0 7 hm5C_associated_SNPs_41779 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99722491-99722515
64251 chr17 78318485 78318485 1 + G A UCEC 78318498 + 78318478 78318518 41 CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC CGTACACATGTACCCCAGTTCAGTTTTCTTGACATCTTCCC < 41bp 1 0.0486989570692512 1 0.0277711749076843 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78318498 chr17:78318485 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_41780 0 0 1 FXR2 POSTAR2 ENCODE chr17:78318481-78318486
64251 chr7 99702529 99702529 1 + G T UCEC 99702547 + 99702527 99702567 41 GAGATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA GATATTCGGCTCAAGAGCTTCCTTCCTAGCGGCTCTGGTGA < 41bp 1 0.0253882551929494 1 0.070514440536499 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702547 chr7:99702529 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_41782 0 0 2 BUD13 POSTAR2 ENCODE chr7:99702493-99702553
64251 chr16 69353373 69353373 1 + G C UCEC 69353363 + 69353343 69353383 41 AAATCCTACCTGGCCAAAGCCGTGGCAACAGAGGCCAACAA AAATCCTACCTGGCCAAAGCCGTGGCAACACAGGCCAACAA < 41bp 1 0.657900941847595 1 0.733780741691589 experiment 0.684198116304809 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69353363 chr16:69353373 nonsynonymous SNV 0.928 5 31 hm5C_associated_SNPs_41783 0 0 1 TBRG4 POSTAR2 ENCODE chr16:69353339-69353386
64251 chr1 237044065 237044065 1 + G A UCEC 237044057 + 237044037 237044077 41 TCTGACCCTTCTTTTTAGAACCCACACAGCAGTTAAAATAG TCTGACCCTTCTTTTTAGAACCCACACAACAGTTAAAATAG < 41bp 1 0.0275814994115586 1 0.101504981517792 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MTR ENSG00000116984 CDS Human protein_coding chr1:237044057 chr1:237044065 nonsynonymous SNV 0.983 4 29 hm5C_associated_SNPs_41784 0 0 2 DDX24 POSTAR2 ENCODE chr1:237044052-237044084
64251 chr2 231931714 231931714 1 + C T UCEC 231931696 + 231931676 231931716 41 GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATCGT GGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATTGT < 41bp 1 0.568247637204165 1 0.0565168559551239 experiment 0.863504725591669 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231931696 chr2:231931714 synonymous SNV . 0 39 hm5C_associated_SNPs_41785 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231931643-231931810
64251 chr20 35857048 35857048 1 + C A UCEC 35857050 + 35857030 35857070 41 CAAGTTTGAACTGGATACCTCTGAAAGAAAGATTGAATTTG CAAGTTTGAACTGGATACATCTGAAAGAAAGATTGAATTTG < 41bp 1 0.595311462003828 1 0.248164415359497 experiment 0.809377075992345 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35857050 chr20:35857048 synonymous SNV . 0 19 hm5C_associated_SNPs_41786 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:35856999-35857141
64251 chr17 45773493 45773493 1 + C T UCEC 45773473 + 45773453 45773493 41 GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGTTC GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGTTT < 41bp 1 0.442893850729704 1 0.0464185476303101 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBKBP1 ENSG00000198933 CDS Human protein_coding chr17:45773473 chr17:45773493 synonymous SNV . 0 41 hm5C_associated_SNPs_41787 0 0 1 GRWD1 POSTAR2 ENCODE chr17:45773488-45773577
64251 chrX 48759675 48759675 1 + G A UCEC 48759667 + 48759647 48759687 41 CGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACAG CGTGGCTATGACAAGGTAGACAGAGAGAAAGAGCGAGACAG < 41bp 1 0.790380826075757 1 0.683687210083008 experiment 0.419238347848487 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759667 chrX:48759675 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_41793 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr2 183616835 183616835 1 + C T UCEC 183616850 + 183616830 183616870 41 AGTTACGAAGAGCATCAAATCTTCTTTATGGTCAGCTTAAG AGTTATGAAGAGCATCAAATCTTCTTTATGGTCAGCTTAAG < 41bp 1 0.395204138346272 1 0.328715145587921 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183616850 chr2:183616835 stopgain 0.999 1 6 hm5C_associated_SNPs_41794 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:183616827-183616842
64251 chrX 70516422 70516422 1 + C T UCEC 70516419 + 70516399 70516439 41 TTGTTCTTTCTTCCAGATTTCCTCGTCCTGTGACTGTGGAG TTGTTCTTTCTTCCAGATTTCCTTGTCCTGTGACTGTGGAG < 41bp 1 0.0442967169349459 1 0.0536989569664001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516419 chrX:70516422 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_41797 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chrX 70516422 70516422 1 + C T UCEC 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTTGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT < 41bp 1 0.12112932995616 1 0.0692953169345856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516422 nonsynonymous SNV 0.996 2 3 hm5C_associated_SNPs_41798 0 0 41 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr1 12061536 12061536 1 + G T UCEC 12061544 + 12061524 12061564 41 TCCCAGGCCGGGGACCGCATCTTCTTTGTGTCTGCTAAGGA TCCCAGGCCGGGTACCGCATCTTCTTTGTGTCTGCTAAGGA < 41bp 1 0.223889508997605 1 0.0602515339851379 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061544 chr1:12061536 nonsynonymous SNV 0.848 3 13 hm5C_associated_SNPs_41799 0 0 1 FXR2 POSTAR2 ENCODE chr1:12061494-12061561
64251 chr19 49686160 49686160 1 + G A UCEC 49686179 + 49686159 49686199 41 GGCCAGGGCTTCGGGGAGAGCGTAAGGACCGGGCAAAGCTG GACCAGGGCTTCGGGGAGAGCGTAAGGACCGGGCAAAGCTG < 41bp 1 0.69981793973544 1 0.6031294465065 experiment 0.60036412052912 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49686179 chr19:49686160 nonsynonymous SNV 0.010 0 2 hm5C_associated_SNPs_41800 0 0 2 RPS3 POSTAR2 ENCODE chr19:49686159-49686182
64251 chr10 5963489 5963489 1 + G A UCEC 5963508 + 5963488 5963528 41 CGGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT CAGGTGACGGAAGGGGAATTCCCTTCAAGGATACATTTGAT < 41bp 1 0.0905634877755126 1 0.539206147193909 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963508 chr10:5963489 nonsynonymous SNV 0.815 4 2 hm5C_associated_SNPs_41801 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5963460-5963506
64251 chr7 97822934 97822934 1 + G A UCEC 97822929 + 97822909 97822949 41 GCATCCCGCTCCCGAGGGCACCGCAGACTCAGAACCAGCCA GCATCCCGCTCCCGAGGGCACCGCAAACTCAGAACCAGCCA < 41bp 1 0.527627388127096 1 0.227830141782761 experiment 0.944745223745807 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822929 chr7:97822934 nonsynonymous SNV 0.009 0 26 hm5C_associated_SNPs_41802 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:97822920-97822940
64251 chrX 102632707 102632707 1 + G A UCEC 102632708 + 102632688 102632728 41 TGCGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCAT TGCGTATCCTTATGGGGGAACTCTCTAATCACCATGACCAT < 41bp 1 0.136886041267427 1 0.0664883553981781 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632708 chrX:102632707 synonymous SNV . 0 20 hm5C_associated_SNPs_41803 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632707 102632707 1 + G A UCEC 102632712 + 102632692 102632732 41 TATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCATG TATCCTTATGGGGGAACTCTCTAATCACCATGACCATCATG < 41bp 1 0.430896874574116 1 0.105573177337646 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632712 chrX:102632707 synonymous SNV . 0 16 hm5C_associated_SNPs_41804 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632707 102632707 1 + G A UCEC 102632725 + 102632705 102632745 41 GAGCTCTCTAATCACCATGACCATCATGATGAATTTTGCCT GAACTCTCTAATCACCATGACCATCATGATGAATTTTGCCT < 41bp 1 0.0236897406875552 1 0.0238809585571289 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632725 chrX:102632707 synonymous SNV . 0 3 hm5C_associated_SNPs_41805 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632707 102632707 1 + G A UCEC 102632726 + 102632706 102632746 41 AGCTCTCTAATCACCATGACCATCATGATGAATTTTGCCTT AACTCTCTAATCACCATGACCATCATGATGAATTTTGCCTT < 41bp 1 0.481519856241277 1 0.0362809300422668 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632726 chrX:102632707 synonymous SNV . 0 2 hm5C_associated_SNPs_41806 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr2 27460321 27460321 1 + G A UCEC 27460341 + 27460321 27460361 41 GCTGCCCTGGCTGGGGGTATCACCATGGTGTGTGCCATGCC ACTGCCCTGGCTGGGGGTATCACCATGGTGTGTGCCATGCC < 41bp 1 0.776699124273806 1 0.862248778343201 experiment 0.446601751452388 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27460341 chr2:27460321 nonsynonymous SNV 0.987 3 1 hm5C_associated_SNPs_41807 0 0 8 FMR1 POSTAR2 ENCODE chr2:27460310-27460339
64251 chr14 56119753 56119753 1 + G T UCEC 56119741 + 56119721 56119761 41 CTATTCTTTTTAAGGATCTTCAAGAAGAAAATGAATCTTTA CTATTCTTTTTAAGGATCTTCAAGAAGAAAATTAATCTTTA < 41bp 1 0.490147374132 1 0.753304243087769 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56119741 chr14:56119753 stopgain 0.987 0 33 hm5C_associated_SNPs_41809 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:56119751-56119772
64251 chr15 25220519 25220519 1 + T C UCEC 25220529 + 25220509 25220549 41 TTGGCAAGAGTAGCAAGATGCTGCAGCACATTGACTATAGA TTGGCAAGAGCAGCAAGATGCTGCAGCACATTGACTATAGA < 41bp 1 0.62311176284472 1 0.552311778068542 experiment 0.75377647431056 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNRPN ENSG00000128739 CDS Human protein_coding chr15:25220529 chr15:25220519 synonymous SNV . 0 11 hm5C_associated_SNPs_41810 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr15:25220500-25220520
64251 chr19 10657581 10657581 1 + G A UCEC 10657575 + 10657555 10657595 41 GCTGTCAGGGTCAGCCTCTCCCAGCCGGTACCATGGGCCTG GCTGTCAGGGTCAGCCTCTCCCAGCCAGTACCATGGGCCTG < 41bp 1 0.419507125082789 1 0.642822504043579 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4D ENSG00000130734 CDS Human protein_coding chr19:10657575 chr19:10657581 nonsynonymous SNV 0.036 1 27 hm5C_associated_SNPs_41811 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:10657568-10657581
64251 chr3 111667872 111667872 1 + G A UCEC 111667867 + 111667847 111667887 41 GTTTCCTGCTGATGCTGATGCTGTTGCCACTGAGCCTGCCA GTTTCCTGCTGATGCTGATGCTGTTACCACTGAGCCTGCCA < 41bp 1 0.204370412942683 1 0.0804378688335419 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111667867 chr3:111667872 nonsynonymous SNV 0.959 0 26 hm5C_associated_SNPs_41812 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:111667854-111667882
64251 chr10 60549133 60549133 1 + T C UCEC 60549151 + 60549131 60549171 41 TTTCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT TTCCAGTATCATTTAAACAGCGTTCCCGAATGTATGGTGCT < 41bp 1 0.0106049438341899 1 0.0555595755577087 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BICC1 ENSG00000122870 CDS Human protein_coding chr10:60549151 chr10:60549133 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_41813 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60549107-60549134
64251 chr10 1090054 1090054 1 - G A UCEC 1090038 - 1090018 1090058 41 ACCTCGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTGT ACCTTGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTGT < 41bp 1 0.127956028581449 1 0.0865922272205353 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IDI1 ENSG00000067064 CDS Human protein_coding chr10:1090038 chr10:1090054 synonymous SNV . 0 5 hm5C_associated_SNPs_41814 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:1090031-1090085
64251 chr3 47385302 47385302 1 + C T UCEC 47385299 + 47385279 47385319 41 CGCCTCTACGCTGTTGGGGGCTACGACGGACAGTCAAACCT CGCCTCTACGCTGTTGGGGGCTATGACGGACAGTCAAACCT < 41bp 1 0.117157220349757 1 0.154024600982666 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385299 chr3:47385302 synonymous SNV . 0 24 hm5C_associated_SNPs_41815 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:47385300-47385320
64251 chr12 7080190 7080190 1 + G A UCEC 7080174 + 7080154 7080194 41 ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAAC ATGCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGAAAAC < 41bp 1 0.180560110345468 1 0.0616549551486969 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080174 chr12:7080190 nonsynonymous SNV 0.974 0 37 hm5C_associated_SNPs_41817 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080190 7080190 1 + G A UCEC 7080176 + 7080156 7080196 41 GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAA GCTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGAAAACAA < 41bp 1 0.17514771952947 1 0.0704514682292938 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080176 chr12:7080190 nonsynonymous SNV 0.974 0 35 hm5C_associated_SNPs_41818 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 7080190 7080190 1 + G A UCEC 7080177 + 7080157 7080197 41 CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGGAAACAAG CTCTGCCACCCAAGCGGCCCCGACTAGGGGCAGAAAACAAG < 41bp 1 0.344642898314191 1 0.121934950351715 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control EMG1 ENSG00000126749 CDS Human protein_coding chr12:7080177 chr12:7080190 nonsynonymous SNV 0.974 0 34 hm5C_associated_SNPs_41819 0 0 3 DDX3X POSTAR2 ENCODE chr12:7080094-7080211
64251 chr12 21598302 21598302 1 + T G UCEC 21598304 + 21598284 21598324 41 TCTAAAATATTGGAAGAATTCGATGTTGAAGAACAATCAAG TCTAAAATATTGGAAGAAGTCGATGTTGAAGAACAATCAAG < 41bp 1 0.588290451551355 1 0.552077770233154 experiment 0.82341909689729 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21598304 chr12:21598302 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_41821 0 0 2 FUS POSTAR2 SRX029328 chr12:21598296-21598324
64251 chr19 7584368 7584368 1 + G A UCEC 7584367 + 7584347 7584387 41 CGACGCCGAAGCTCCGGGCTCGGAACCCCAAGATCCCGACC CGACGCCGAAGCTCCGGGCTCAGAACCCCAAGATCCCGACC < 41bp 1 0.635826772028065 1 0.593423306941986 experiment 0.72834645594387 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7584367 chr19:7584368 synonymous SNV . 0 22 hm5C_associated_SNPs_41822 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7584348-7584411
64251 chr4 57876569 57876569 1 + C T UCEC 57876563 + 57876543 57876583 41 CTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCT CTTTTGCGTCTACTCTTTCTCACCTGTGTCGTTTAAATTCT < 41bp 1 0.671668332550383 1 0.342612385749817 experiment 0.656663334899233 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57876563 chr4:57876569 nonsynonymous SNV 0.998 5 27 hm5C_associated_SNPs_41824 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:57876532-57876584
64251 chr1 222806514 222806514 1 + G A UCEC 222806499 + 222806479 222806519 41 CTATTGATGCAAACAAGCAACCAGAGACAGCCGCCGAAGAG CTATTGATGCAAACAAGCAACCAGAGACAGCCGCCAAAGAG < 41bp 1 0.547278526531355 1 0.319833993911743 experiment 0.905442946937289 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222806499 chr1:222806514 nonsynonymous SNV 0.021 1 36 hm5C_associated_SNPs_41825 0 0 2 FASTKD2 POSTAR2 ENCODE chr1:222806445-222806528
64251 chr2 30756154 30756154 1 + C T UCEC 30756147 + 30756127 30756167 41 TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT TCAGATTGGAGAAAATTTGCCTCAAAGTGAGTCTCAAAGGT < 41bp 1 0.67698440783257 1 0.596725702285767 experiment 0.646031184334861 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30756147 chr2:30756154 nonsynonymous SNV 0.983 2 28 hm5C_associated_SNPs_41826 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:30756139-30756168
64251 chr1 171535881 171535881 1 + G T UCEC 171535864 + 171535844 171535884 41 ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACAGATC ACAAGAGAAACCAAGCCCAGCTACAGTCAGAAGCACATATC < 41bp 1 0.433056289080189 1 0.411839008331299 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171535864 chr1:171535881 nonsynonymous SNV 0.998 3 38 hm5C_associated_SNPs_41827 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171535819-171535894
64251 chr11 62545508 62545508 1 + A G UCEC 62545497 + 62545477 62545517 41 GCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTT GCACTGCCCATGCGCCCCGCCAGGGAGGGTGGACTCTACTT < 41bp 1 0.775389876720774 1 0.873136162757874 experiment 0.449220246558452 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62545497 chr11:62545508 nonsynonymous SNV 0.995 2 32 hm5C_associated_SNPs_41828 0 0 1 PPIG POSTAR2 ENCODE chr11:62545473-62545512
64251 chr1 180010817 180010817 1 + G T UCEC 180010799 + 180010779 180010819 41 AACCCCTTTTATTTAAAGGTCCATGCAGAATCATTACAGCA AACCCCTTTTATTTAAAGGTCCATGCAGAATCATTACATCA < 41bp 1 0.0161521612582193 1 0.0228069424629211 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP350 ENSG00000135837 CDS Human protein_coding chr1:180010799 chr1:180010817 nonsynonymous SNV 0.998 0 39 hm5C_associated_SNPs_41829 0 0 4 DDX24 POSTAR2 ENCODE chr1:180010794-180010895
64251 chr8 59483456 59483456 1 + C A UCEC 59483471 + 59483451 59483491 41 AACTGCTTTTTCTGCAAACCCTGCCAATCCAGCAATTTTGT AACTGATTTTTCTGCAAACCCTGCCAATCCAGCAATTTTGT < 41bp 1 0.440973514747204 1 0.0261452794075012 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SDCBP ENSG00000137575 CDS Human protein_coding chr8:59483471 chr8:59483456 nonsynonymous SNV 0.970 1 6 hm5C_associated_SNPs_41830 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:59483446-59483481
64251 chr17 80684787 80684787 1 + G T UCEC 80684806 + 80684786 80684826 41 AGCAGAGGATTCCTCTGGGCCGGTGATTTTTGACCCAGCTT ATCAGAGGATTCCTCTGGGCCGGTGATTTTTGACCCAGCTT < 41bp 1 0.435469189773549 1 0.421065270900726 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684806 chr17:80684787 nonsynonymous SNV 0.142 1 2 hm5C_associated_SNPs_41831 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:80684779-80684807
64251 chr19 39950208 39950208 1 + T C UCEC 39950216 + 39950196 39950236 41 TAGGGATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTG TAGGGATCCCAACCTGTGGACTGTCAAATGTAAGGTATGTG < 41bp 1 0.0381334908310701 1 0.0712136030197144 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950216 chr19:39950208 synonymous SNV . 0 13 hm5C_associated_SNPs_41832 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr19 39950208 39950208 1 + T C UCEC 39950220 + 39950200 39950240 41 GATCCCAATCTGTGGACTGTCAAATGTAAGGTATGTGCTCT GATCCCAACCTGTGGACTGTCAAATGTAAGGTATGTGCTCT < 41bp 1 0.402495056300409 1 0.854240000247955 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950220 chr19:39950208 synonymous SNV . 0 9 hm5C_associated_SNPs_41833 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39950192-39950230
64251 chr12 53700842 53700842 1 + G A UCEC 53700859 + 53700839 53700879 41 GCGGCTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG GCGACTTCACTGGCGGTCACCACACCCGAGAGGGTGCCTTG < 41bp 1 0.54273213586956 1 0.352064818143845 experiment 0.91453572826088 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700859 chr12:53700842 nonsynonymous SNV 0.996 4 4 hm5C_associated_SNPs_41835 0 0 1 TBRG4 POSTAR2 ENCODE chr12:53700834-53700865
64251 chr7 104717815 104717815 1 + C A UCEC 104717824 + 104717804 104717844 41 GATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAG GATGCACTTATAATTGAATACAGAGGGAAGTTTATGCTGAG < 41bp 1 0.484216771611237 1 0.77402675151825 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2E ENSG00000005483 CDS Human protein_coding chr7:104717824 chr7:104717815 synonymous SNV . 0 12 hm5C_associated_SNPs_41836 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:104717787-104717863
64251 chr3 47870579 47870579 1 + C T UCEC 47870592 + 47870572 47870612 41 AGAAGATCGATGCTGAGCGGCAGGCTGCAGCTGCAGCCTGC AGAAGATTGATGCTGAGCGGCAGGCTGCAGCTGCAGCCTGC < 41bp 1 0.476484315960374 1 0.213461637496948 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47870592 chr3:47870579 synonymous SNV . 0 8 hm5C_associated_SNPs_41837 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:47870528-47870601
64251 chr3 47870579 47870579 1 + C T UCEC 47870599 + 47870579 47870619 41 CGATGCTGAGCGGCAGGCTGCAGCTGCAGCCTGCCAGCTGT TGATGCTGAGCGGCAGGCTGCAGCTGCAGCCTGCCAGCTGT < 41bp 1 0.487733350960335 1 0.108718037605286 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47870599 chr3:47870579 synonymous SNV . 0 1 hm5C_associated_SNPs_41838 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:47870528-47870601
64251 chr17 37359313 37359313 1 + C T UCEC 37359316 + 37359296 37359336 41 GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGT GGAGAATGAGGATTTTGTGCCGGCTGCTCAGAAGATACCGT < 41bp 1 0.469189558892455 1 0.316915154457092 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359316 chr17:37359313 nonsynonymous SNV 0.621 1 18 hm5C_associated_SNPs_41839 0 0 62 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359313 37359313 1 + C T UCEC 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGTGCCGGCTGCTCAGAAGATACCGTGAA < 41bp 1 0.385376728878291 1 0.124901294708252 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359313 nonsynonymous SNV 0.621 1 15 hm5C_associated_SNPs_41840 0 0 62 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359313 37359313 1 + C T UCEC 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGTGCCGGCTGCTCAGAAGATACCGTGAATCT < 41bp 1 0.446903414343794 1 0.121127992868423 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359313 nonsynonymous SNV 0.621 1 12 hm5C_associated_SNPs_41841 0 0 62 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr17 37359313 37359313 1 + C T UCEC 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA TGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA < 41bp 1 0.227580193758306 1 0.131600618362427 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359313 nonsynonymous SNV 0.621 1 1 hm5C_associated_SNPs_41842 0 0 62 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37359260-37359320
64251 chr2 207027320 207027320 1 + G A UCEC 207027336 + 207027316 207027356 41 AGACGGCTTAGTCTGGGGCTCATGTGAGTTTAGGCTTTGCC AGACAGCTTAGTCTGGGGCTCATGTGAGTTTAGGCTTTGCC < 41bp 1 0.197602132554313 1 0.247000277042389 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 CDS Human protein_coding chr2:207027336 chr2:207027320 nonsynonymous SNV 0.980 2 5 hm5C_associated_SNPs_41844 0 0 2 LIN28B POSTAR2 ENCODE chr2:207027319-207027338
64251 chrX 205513 205513 1 + G A UCEC 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCATGCTGAA < 41bp 1 0.4371811439156 1 0.223816156387329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205513 nonsynonymous SNV 0.013 2 34 hm5C_associated_SNPs_41845 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:205501-205539
64251 chr19 11152184 11152184 1 + C A UCEC 11152165 + 11152145 11152185 41 CGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCT CGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACAT < 41bp 1 0.393138256583337 1 0.283856064081192 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152165 chr19:11152184 nonsynonymous SNV 0.995 2 40 hm5C_associated_SNPs_41850 0 0 15 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:11152150-11152197
64251 chr19 11152184 11152184 1 + C A UCEC 11152168 + 11152148 11152188 41 CCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCAC CCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACATCAC < 41bp 1 0.14388339667739 1 0.093771904706955 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152168 chr19:11152184 nonsynonymous SNV 0.995 2 37 hm5C_associated_SNPs_41851 0 0 15 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:11152150-11152197
64251 chr10 122664256 122664256 1 + G A UCEC 122664258 + 122664238 122664278 41 AGTCACTACTGTCACCTCGTCAGGCCCCTCTCAGAGCACCA AGTCACTACTGTCACCTCATCAGGCCCCTCTCAGAGCACCA < 41bp 1 0.388185058963779 1 0.837097764015198 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664258 chr10:122664256 synonymous SNV . 0 19 hm5C_associated_SNPs_41852 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:122664237-122664267
64251 chr7 73922430 73922430 1 + G A UCEC 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGCACTGTGACGTCCCCACCAACGGCTGCGGACC < 41bp 1 0.546911107091352 1 0.198889404535294 experiment 0.906177785817296 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922430 nonsynonymous SNV 0.998 0 11 hm5C_associated_SNPs_41853 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:73922410-73922438
64251 chr18 19371502 19371502 1 + C T UCEC 19371516 + 19371496 19371536 41 AATGGGCTGAAGCGATGCTTCCAGTAAGTATGTTTAGAATA AATGGGTTGAAGCGATGCTTCCAGTAAGTATGTTTAGAATA < 41bp 1 0.209190564093232 1 0.0596825182437897 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19371516 chr18:19371502 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_41858 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:19371480-19371514
64251 chr1 222806495 222806495 1 + G A UCEC 222806499 + 222806479 222806519 41 CTATTGATGCAAACAAGCAACCAGAGACAGCCGCCGAAGAG CTATTGATGCAAACAAACAACCAGAGACAGCCGCCGAAGAG < 41bp 1 0.611251349156872 1 0.324140906333923 experiment 0.777497301686256 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIA3 ENSG00000154305 CDS Human protein_coding chr1:222806499 chr1:222806495 synonymous SNV . 0 17 hm5C_associated_SNPs_41860 0 0 2 FASTKD2 POSTAR2 ENCODE chr1:222806445-222806528
64251 chr22 21288070 21288070 1 + T G UCEC 21288090 + 21288070 21288110 41 TCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGC GCCAAGCCCACCAATGGGATCTGTCTCAGCACCCAACCTGC < 41bp 1 0.111047326395426 1 0.157166332006454 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRKL ENSG00000099942 CDS Human protein_coding chr22:21288090 chr22:21288070 stopgain 0.996 1 1 hm5C_associated_SNPs_41861 0 0 3 BUD13 POSTAR2 ENCODE chr22:21288042-21288112
64251 chr2 46985765 46985765 1 + G A UCEC 46985774 + 46985754 46985794 41 AATGTGGACATGAACTCCAACAGATGTTTGTCTGTCAAAGA AATGTGGACATAAACTCCAACAGATGTTTGTCTGTCAAAGA < 41bp 1 0.367094268744638 1 0.325285017490387 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46985774 chr2:46985765 nonsynonymous SNV 0.996 0 12 hm5C_associated_SNPs_41863 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:46985754-46985769
64251 chr9 131010985 131010985 1 + G A UCEC 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACCATGAGGGACCTCATGCCCAAGACCATCATG < 41bp 1 0.34335571719787 1 0.0726199746131897 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131010985 nonsynonymous SNV 0.927 2 12 hm5C_associated_SNPs_41864 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr14 21544750 21544750 1 + G A UCEC 21544752 + 21544732 21544772 41 ATCCTCCCCTTGTTCAGCGGCTGCTGATTCTCATTCATGAT ATCCTCCCCTTGTTCAGCAGCTGCTGATTCTCATTCATGAT < 41bp 1 0.176969835430972 1 0.137535125017166 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21544752 chr14:21544750 nonsynonymous SNV 0.703 0 19 hm5C_associated_SNPs_41865 0 0 3 NOL12 POSTAR2 ENCODE chr14:21544721-21544752
64251 chr11 65271218 65271218 1 + C A UCEC 65271236 + 65271216 65271256 41 CACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACG CAATCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACG < 41bp 1 0.706464411370955 1 0.684435069561005 experiment 0.587071177258091 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65271236 chr11:65271218 . . 0 3 hm5C_associated_SNPs_41866 0 0 137 PTBP1 POSTAR2 GSE19323,GSM480476 chr11:65271100-65271240
64251 chr10 5494333 5494333 1 + C T UCEC 5494328 + 5494308 5494348 41 TTTCTTTTTTAAGTCATTTACCCTTCGTGGTGACCACAGAT TTTCTTTTTTAAGTCATTTACCCTTTGTGGTGACCACAGAT < 41bp 1 0.102831737082263 1 0.0805096626281738 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NET1 ENSG00000173848 CDS Human protein_coding chr10:5494328 chr10:5494333 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_41868 0 0 10 FXR2 POSTAR2 GSE39682,GSM977620 chr10:5494320-5494340
64251 chr11 110333106 110333106 1 + A G UCEC 110333093 + 110333073 110333113 41 TACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATC TACAGATCACGGTTGGGCTGCCAAATCTGTTTGGCAAAATC < 41bp 1 0.203424711963849 1 0.110003530979156 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333093 chr11:110333106 nonsynonymous SNV 0.994 2 34 hm5C_associated_SNPs_41869 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:110333081-110333119
64251 chr11 110333106 110333106 1 + A G UCEC 110333094 + 110333074 110333114 41 ACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATCT ACAGATCACGGTTGGGCTGCCAAATCTGTTTGGCAAAATCT < 41bp 1 0.23071738285586 1 0.476891338825226 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333094 chr11:110333106 nonsynonymous SNV 0.994 2 33 hm5C_associated_SNPs_41870 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:110333081-110333119
64251 chr5 110097171 110097171 1 + G T UCEC 110097160 + 110097140 110097180 41 TGTGCAGAGTATGTTGGATGCTTATTTTCCAGAACTTATTG TGTGCAGAGTATGTTGGATGCTTATTTTCCATAACTTATTG < 41bp 1 0.319222584870229 1 0.0678516328334808 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097160 chr5:110097171 stopgain 1.000 1 32 hm5C_associated_SNPs_41871 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr17 77755508 77755508 1 + G T UCEC 77755519 + 77755499 77755539 41 CATGAGAAGGAGGTGCAGAACCGGAAGAGAGGCAAGAGGCC CATGAGAAGTAGGTGCAGAACCGGAAGAGAGGCAAGAGGCC < 41bp 1 0.692417629690328 1 0.557493805885315 experiment 0.615164740619345 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CBX2 ENSG00000173894 CDS Human protein_coding chr17:77755519 chr17:77755508 stopgain 1.000 1 10 hm5C_associated_SNPs_41872 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:77755505-77755523
64251 chrX 41198294 41198294 1 + C T UCEC 41198304 + 41198284 41198324 41 TTTAGAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAG TTTAGAAGGGTGCTATATTCCTCCTCATTTAAGGAACCGAG < 41bp 1 0.34119354639218 1 0.384774208068848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41198304 chrX:41198294 nonsynonymous SNV 0.997 3 11 hm5C_associated_SNPs_41873 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:41198258-41198333
64251 chr4 48384654 48384654 1 + G A UCEC 48384660 + 48384640 48384680 41 CAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTG CAATTCTACAAGACAGGGTACTTTTAGTGATCAGGAACTTG < 41bp 1 0.0230725395764447 1 0.0111980736255646 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384660 chr4:48384654 nonsynonymous SNV 0.999 4 15 hm5C_associated_SNPs_41875 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:48384639-48384654
64251 chr5 72798848 72798848 1 + G T UCEC 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CATTACAGGCCATGCTGAGACAAATCAGCTGACAGAAATGC < 41bp 1 0.427867288901207 1 0.288900196552277 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798848 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_41876 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr12 100732658 100732658 1 + G A UCEC 100732661 + 100732641 100732681 41 AAAGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTA AAAGCAGACCCAACAAAAACCCACAGATATGTCTGCCCTTA < 41bp 1 0.624774785431534 1 0.114204108715057 experiment 0.750450429136932 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732661 chr12:100732658 nonsynonymous SNV 0.949 1 18 hm5C_associated_SNPs_41878 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:100732615-100732658
64251 chr12 100732658 100732658 1 + G A UCEC 100732662 + 100732642 100732682 41 AAGCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTAA AAGCAGACCCAACAAAAACCCACAGATATGTCTGCCCTTAA < 41bp 1 0.639461536586096 1 0.143803089857101 experiment 0.721076926827809 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732662 chr12:100732658 nonsynonymous SNV 0.949 1 17 hm5C_associated_SNPs_41879 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:100732615-100732658
64251 chr12 100732658 100732658 1 + G A UCEC 100732664 + 100732644 100732684 41 GCAGACCCAACAAAGACCCACAGATATGTCTGCCCTTAATA GCAGACCCAACAAAAACCCACAGATATGTCTGCCCTTAATA < 41bp 1 0.267808507497741 1 0.476432532072067 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732664 chr12:100732658 nonsynonymous SNV 0.949 1 15 hm5C_associated_SNPs_41880 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:100732615-100732658
64251 chr12 100732658 100732658 1 + G A UCEC 100732676 + 100732656 100732696 41 AAGACCCACAGATATGTCTGCCCTTAATAATCTCTTTGGCC AAAACCCACAGATATGTCTGCCCTTAATAATCTCTTTGGCC < 41bp 1 0.052356037331439 1 0.0589154064655304 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732676 chr12:100732658 nonsynonymous SNV 0.949 1 3 hm5C_associated_SNPs_41881 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:100732615-100732658
64251 chr15 91456113 91456113 1 + G A UCEC 91456118 + 91456098 91456138 41 TTTCTCTAGCCCTACGTCCCCAAGGAGCCCCCCGTGCTGCG TTTCTCTAGCCCTACATCCCCAAGGAGCCCCCCGTGCTGCG < 41bp 1 0.636344269979595 1 0.89609694480896 experiment 0.727311460040809 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAN2A2 ENSG00000196547 CDS Human protein_coding chr15:91456118 chr15:91456113 nonsynonymous SNV 0.447 0 16 hm5C_associated_SNPs_41882 0 0 3 DDX24 POSTAR2 ENCODE chr15:91456106-91456132
64251 chr7 70252211 70252211 1 + C T UCEC 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTTGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA < 41bp 1 0.145109458039715 1 0.0629980266094208 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252211 synonymous SNV . 0 4 hm5C_associated_SNPs_41883 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr15 41192202 41192202 1 + C T UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGGCCTGAGATGTCTGGCGCACCTA < 41bp 1 0.587187294399668 1 0.356966882944107 experiment 0.825625411200664 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192202 stopgain 0.996 1 22 hm5C_associated_SNPs_41884 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr14 102466691 102466691 1 + C T UCEC 102466707 + 102466687 102466727 41 AAATCGATCAGATGAAGGAGCAACCCTGGGTTTCAGTACAG AAATTGATCAGATGAAGGAGCAACCCTGGGTTTCAGTACAG < 41bp 1 0.0418911451348553 1 0.197573095560074 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102466707 chr14:102466691 synonymous SNV . 0 5 hm5C_associated_SNPs_41885 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102466642-102466729
64251 chr2 54871555 54871555 1 + C A UCEC 54871546 + 54871526 54871566 41 TTACATAAAATGTGGGAAGTCCTTGAATCCACTACCCAGAC TTACATAAAATGTGGGAAGTCCTTGAATCAACTACCCAGAC < 41bp 1 0.0402154660983994 1 0.0925605893135071 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871546 chr2:54871555 synonymous SNV . 0 30 hm5C_associated_SNPs_41886 0 0 15 RBM47 POSTAR2 GSE58380,GSM1409656 chr2:54871520-54871560
64251 chr1 38171217 38171217 1 + C T UCEC 38171209 + 38171189 38171229 41 CTTGCTGACAGCAAAGAGATCTTCCTCACTGTGCCAGTGGG CTTGCTGACAGCAAAGAGATCTTCCTCATTGTGCCAGTGGG < 41bp 1 0.120725146854965 1 0.0468387305736542 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38171209 chr1:38171217 nonsynonymous SNV 0.931 2 29 hm5C_associated_SNPs_41887 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:38171200-38171220
64251 chr16 28843545 28843545 1 + G A UCEC 28843531 + 28843511 28843551 41 CCCCTTTTCTTCCAGTGGGCCGGATGTATCCCCCGCGTTCT CCCCTTTTCTTCCAGTGGGCCGGATGTATCCCCCACGTTCT < 41bp 1 0.327829988005079 1 0.447473585605621 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28843531 chr16:28843545 synonymous SNV . 0 35 hm5C_associated_SNPs_41888 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28843520-28843560
64251 chr3 157841677 157841677 1 + A C UCEC 157841658 + 157841638 157841678 41 ATTATATTTTATTTCAGACGCAGGCATCGATCAAGCAGTAG ATTATATTTTATTTCAGACGCAGGCATCGATCAAGCAGTCG < 41bp 1 0.33874370153041 1 0.116480052471161 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841658 chr3:157841677 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_41889 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr3 157841677 157841677 1 + A C UCEC 157841665 + 157841645 157841685 41 TTTATTTCAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT TTTATTTCAGACGCAGGCATCGATCAAGCAGTCGCTCTTCT < 41bp 1 0.11826560267626 1 0.14891904592514 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841665 chr3:157841677 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_41890 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr16 24835052 24835052 1 + G A UCEC 24835032 + 24835012 24835052 41 TCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCG TCCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCA < 41bp 1 0.690416327471563 1 0.367930948734283 experiment 0.619167345056874 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835032 chr16:24835052 nonsynonymous SNV 0.999 3 41 hm5C_associated_SNPs_41892 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835052 24835052 1 + G A UCEC 24835033 + 24835013 24835053 41 CCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGA CCACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCAA < 41bp 1 0.251329441398152 1 0.307909667491913 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835033 chr16:24835052 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_41893 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr16 24835052 24835052 1 + G A UCEC 24835034 + 24835014 24835054 41 CACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCGAG CACAAGCCTGTGGGGTCCCCCAAGCAGCAGCGACCCCCAAG < 41bp 1 0.470001695222268 1 0.407500714063644 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24835034 chr16:24835052 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_41894 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr16:24835040-24835060
64251 chr4 144460050 144460050 1 + T C UCEC 144460033 + 144460013 144460053 41 TGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGTATG TGGCATCAATCTTGCGACTGCTGATGTAGTAATTTTGCATG < 41bp 1 0.318138945913889 1 0.264405131340027 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144460033 chr4:144460050 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_41895 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:144459996-144460085
64251 chr14 21462706 21462706 1 + T C UCEC 21462722 + 21462702 21462742 41 GTGGTTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT GTGGCTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT < 41bp 1 0.0833533525681871 1 0.0114620923995972 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21462722 chr14:21462706 synonymous SNV . 0 5 hm5C_associated_SNPs_41897 0 0 3 PPIG POSTAR2 ENCODE chr14:21462703-21462719
64251 chr17 38142915 38142915 1 + C A UCEC 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCCTATATCCAACTCCTCGTGGTCATCTTCATGATGAA < 41bp 1 0.344064504087138 1 0.175295025110245 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142915 nonsynonymous SNV 0.900 2 10 hm5C_associated_SNPs_41898 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr1 16261826 16261826 1 + C G UCEC 16261811 + 16261791 16261831 41 CAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGACCCGGG CAAAGCTAGATGCTCATTCTCCTCGACCAAGTGGAGCCGGG < 41bp 1 0.0869879549104906 1 0.104220479726791 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16261811 chr1:16261826 nonsynonymous SNV 0.004 1 36 hm5C_associated_SNPs_41899 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:16261760-16261840
64251 chr17 33900713 33900713 1 + G A UCEC 33900704 + 33900684 33900724 41 ATGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCA ATGAGTGAAGTAGAGCCTGACCTGGTATTACCATTGCTTCA < 41bp 1 0.267219021723 1 0.0526687502861023 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900704 chr17:33900713 . . 0 30 hm5C_associated_SNPs_41901 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900713 33900713 1 + G A UCEC 33900705 + 33900685 33900725 41 TGAGTGAAGTAGAGCCTGACCTGGTATTGCCATTGCTTCAC TGAGTGAAGTAGAGCCTGACCTGGTATTACCATTGCTTCAC < 41bp 1 0.758032614527425 1 0.0911986529827118 experiment 0.483934770945149 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900705 chr17:33900713 . . 0 29 hm5C_associated_SNPs_41902 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900713 33900713 1 + G A UCEC 33900715 + 33900695 33900735 41 AGAGCCTGACCTGGTATTGCCATTGCTTCACTGTTGGCTTT AGAGCCTGACCTGGTATTACCATTGCTTCACTGTTGGCTTT < 41bp 1 0.280468375428436 1 0.192359417676926 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900715 chr17:33900713 . . 0 19 hm5C_associated_SNPs_41903 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr17 33900713 33900713 1 + G A UCEC 33900725 + 33900705 33900745 41 CTGGTATTGCCATTGCTTCACTGTTGGCTTTGACCAGGGTA CTGGTATTACCATTGCTTCACTGTTGGCTTTGACCAGGGTA < 41bp 1 0.30552640776388 1 0.136425971984863 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD7 ENSG00000207297 ncRNA_exonic Human snoRNA chr17:33900725 chr17:33900713 . . 0 9 hm5C_associated_SNPs_41904 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:33900667-33900721
64251 chr19 41120229 41120229 1 + G A UCEC 41120209 + 41120189 41120229 41 CCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACG CCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACA < 41bp 1 0.0264208167127126 1 0.0144018530845642 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTBP4 ENSG00000090006 CDS Human protein_coding chr19:41120209 chr19:41120229 nonsynonymous SNV 0.997 4 41 hm5C_associated_SNPs_41905 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:41120194-41120229
64251 chr12 101680180 101680180 1 + C T UCEC 101680176 + 101680156 101680196 41 GTTTTTTTTGACTATCACCTCGATCCTGGAGACTCAGGACA GTTTTTTTTGACTATCACCTCGATTCTGGAGACTCAGGACA < 41bp 1 0.121966178517278 1 0.0629355907440186 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101680176 chr12:101680180 synonymous SNV . 0 25 hm5C_associated_SNPs_41906 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:101680171-101680196
64251 chr5 72798827 72798827 1 + T C UCEC 72798844 + 72798824 72798864 41 CATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC CATCACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGC < 41bp 1 0.605191179047287 1 0.348757266998291 experiment 0.789617641905426 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTF3 ENSG00000145741 CDS Human protein_coding chr5:72798844 chr5:72798827 synonymous SNV . 0 4 hm5C_associated_SNPs_41907 0 0 43 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:72798760-72798880
64251 chr1 182827323 182827323 1 + T C UCEC 182827338 + 182827318 182827358 41 CCATCTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA CCATCCTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA < 41bp 1 0.199106612494248 1 0.135673761367798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827338 chr1:182827323 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_41908 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 182827323 182827323 1 + T C UCEC 182827342 + 182827322 182827362 41 CTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGAAGAA CCTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGAAGAA < 41bp 1 0.766319920775585 1 0.381755769252777 experiment 0.467360158448829 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827342 chr1:182827323 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_41909 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 109325272 109325272 1 + G A UCEC 109325284 + 109325264 109325304 41 TTGACAGGGAAATTCCCAAGCTTATGAAAGAAATTTCATCA TTGACAGGAAAATTCCCAAGCTTATGAAAGAAATTTCATCA < 41bp 1 0.157304414754699 1 0.0607879459857941 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109325284 chr1:109325272 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_41910 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221659 chr1:109325260-109325280
64251 chr8 17819583 17819583 1 + A G UCEC 17819570 + 17819550 17819590 41 CTGCTAGTGTGGGTAACTGTCCCACCAAAAAATATATGCCA CTGCTAGTGTGGGTAACTGTCCCACCAAAAAATGTATGCCA < 41bp 1 0.178223168228957 1 0.353214472532272 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PCM1 ENSG00000078674 CDS Human protein_coding chr8:17819570 chr8:17819583 nonsynonymous SNV 0.984 1 34 hm5C_associated_SNPs_41911 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:17819569-17819587
64251 chr8 17819583 17819583 1 + A G UCEC 17819571 + 17819551 17819591 41 TGCTAGTGTGGGTAACTGTCCCACCAAAAAATATATGCCAG TGCTAGTGTGGGTAACTGTCCCACCAAAAAATGTATGCCAG < 41bp 1 0.145836119138972 1 0.461863994598389 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17819571 chr8:17819583 nonsynonymous SNV 0.984 1 33 hm5C_associated_SNPs_41912 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:17819569-17819587
64251 chr19 38780811 38780811 1 + C A UCEC 38780801 + 38780781 38780821 41 CACTGGGCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTG CACTGGGCCTTGCCGTGCATCCTTCCCACGATGGTACTTTG < 41bp 1 0.0150268132953442 1 0.074692964553833 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780801 chr19:38780811 nonsynonymous SNV . 0 31 hm5C_associated_SNPs_41913 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chrX 48385619 48385619 1 + G A UCEC 48385618 + 48385598 48385638 41 CTCAGCCTGTGGGTGGTGATCGCCTTTCTCCGCCAGCATCC CTCAGCCTGTGGGTGGTGATCACCTTTCTCCGCCAGCATCC < 41bp 1 0.771203103761484 1 0.0934190154075623 experiment 0.457593792477032 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EBP ENSG00000147155 CDS Human protein_coding chrX:48385618 chrX:48385619 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_41914 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48385615-48385656
64251 chr6 7578032 7578032 1 + C T UCEC 7578027 + 7578007 7578047 41 TGCAGGATTATGAGCTCCAGCTGGCCTCATACACCTCAGGA TGCAGGATTATGAGCTCCAGCTGGCTTCATACACCTCAGGA < 41bp 1 0.319824390646166 1 0.388523876667023 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DSP ENSG00000096696 CDS Human protein_coding chr6:7578027 chr6:7578032 synonymous SNV . 0 26 hm5C_associated_SNPs_41915 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:7578012-7578045
64251 chr20 25198161 25198161 1 + C T UCEC 25198155 + 25198135 25198175 41 CAGGGCACCCTGCAGGCCTCCCCACCCGGCTACCTGACGGC CAGGGCACCCTGCAGGCCTCCCCACCTGGCTACCTGACGGC < 41bp 1 0.148779185794553 1 0.0681360363960266 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25198155 chr20:25198161 synonymous SNV . 0 27 hm5C_associated_SNPs_41916 0 0 2 GRWD1 POSTAR2 ENCODE chr20:25198137-25198174
64251 chr4 7026929 7026929 1 + G T UCEC 7026933 + 7026913 7026953 41 AGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACG AGGACCTGCCCGCCGATGAGCTGTTTGCCTCCATCGCCACG < 41bp 1 0.272763806933218 1 0.0397909879684448 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026933 chr4:7026929 nonsynonymous SNV 0.689 0 17 hm5C_associated_SNPs_41917 0 0 1 FXR2 POSTAR2 ENCODE chr4:7026900-7026957
64251 chr17 45757963 45757963 1 + C T UCEC 45757956 + 45757936 45757976 41 ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACAAA ATGAATTGTTAACTGAAGGGCGGAGATTGAAGACTAACAAA < 41bp 1 0.386324759344497 1 0.219311773777008 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757956 chr17:45757963 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_41927 0 0 33 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr1 171763642 171763642 1 + G T UCEC 171763629 + 171763609 171763649 41 CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTTAAAA CCCAGCATTTGTGGAGCAATCTTTTCTACAGAATGTTAAAA < 41bp 1 0.15970573303175 1 0.0624492764472961 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763629 chr1:171763642 nonsynonymous SNV 0.982 0 34 hm5C_associated_SNPs_41928 0 0 1 PRPF8 POSTAR2 ENCODE chr1:171763642-171763704
64251 chr10 80968149 80968149 1 + C T UCEC 80968135 + 80968115 80968155 41 TCCACAATGCCGCCACGGAGCTGCTGGACTGGTGCGGAGAC TCCACAATGCCGCCACGGAGCTGCTGGACTGGTGTGGAGAC < 41bp 1 0.324311585000194 1 0.106821060180664 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:80968135 chr10:80968149 synonymous SNV . 0 35 hm5C_associated_SNPs_41929 0 0 5 DDX24 POSTAR2 ENCODE chr10:80968144-80968190
64251 chr10 292866 292866 1 + G T UCEC 292849 + 292829 292869 41 AGAAGGGAGATTTTGGAAATCTAAGAATGAGGACCGAGGTG AGAAGGGAGATTTTGGAAATCTAAGAATGAGGACCGATGTG < 41bp 1 0.733966249945311 1 0.103487551212311 experiment 0.532067500109379 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZMYND11 ENSG00000015171 CDS Human protein_coding chr10:292849 chr10:292866 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_41930 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:292851-292886
64251 chr14 103805646 103805646 1 + G T UCEC 103805638 + 103805618 103805658 41 TTAATGAGAAGATTAGAGAACAGATTAAGAAATACAGGCGC TTAATGAGAAGATTAGAGAACAGATTAATAAATACAGGCGC < 41bp 1 0.387974776246537 1 0.144428133964539 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805638 chr14:103805646 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_41931 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:103805506-103805667
64251 chr1 82372812 82372812 1 + G A UCEC 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCACTAACTATGGTCGGACGGATGACAAGATTTGT < 41bp 1 0.209586926800328 1 0.354738831520081 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372812 nonsynonymous SNV 0.885 4 9 hm5C_associated_SNPs_41933 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chr15 22958328 22958328 1 + G T UCEC 22958333 + 22958313 22958353 41 CCTGGAGACCAAGGAGGCATCGATGATGGAGTGCGTGTCCT CCTGGAGACCAAGGATGCATCGATGATGGAGTGCGTGTCCT < 41bp 1 0.521632140131633 1 0.314628839492798 experiment 0.956735719736733 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22958333 chr15:22958328 nonsynonymous SNV . 0 16 hm5C_associated_SNPs_41934 0 0 8 DDX24 POSTAR2 ENCODE chr15:22958269-22958340
64251 chr11 125475562 125475562 1 + T C UCEC 125475549 + 125475529 125475569 41 GCCATCTTTTGCATGCTACTCACCTACTACATGTGGATCAA GCCATCTTTTGCATGCTACTCACCTACTACATGCGGATCAA < 41bp 1 0.620505324852442 1 0.19466495513916 experiment 0.758989350295116 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125475549 chr11:125475562 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_41935 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:125475535-125475586
64251 chr19 36034713 36034713 1 - C T UCEC 36034699 - 36034679 36034719 41 GTGTAGGCAAGGATGCCAGCCATGGGCCCCTTGGCTGCTGC GTGTAGACAAGGATGCCAGCCATGGGCCCCTTGGCTGCTGC < 41bp 1 0.501351246582287 1 0.547634541988373 experiment 0.997297506835425 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36034699 chr19:36034713 nonsynonymous SNV 0.989 3 7 hm5C_associated_SNPs_41936 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36034689-36034728
64251 chr19 13051159 13051159 1 + G A UCEC 13051158 + 13051138 13051178 41 GAGTCCGGCTCCTTGGAAGACGATTGGGACTTCCTGCCACC GAGTCCGGCTCCTTGGAAGACAATTGGGACTTCCTGCCACC < 41bp 1 0.306900808595871 1 0.167683571577072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051158 chr19:13051159 nonsynonymous SNV 0.785 4 22 hm5C_associated_SNPs_41937 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051159 13051159 1 + G A UCEC 13051171 + 13051151 13051191 41 TGGAAGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAG TGGAAGACAATTGGGACTTCCTGCCACCCAAGAAGATAAAG < 41bp 1 0.293406549410064 1 0.281727194786072 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051171 chr19:13051159 nonsynonymous SNV 0.785 4 9 hm5C_associated_SNPs_41938 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051159 13051159 1 + G A UCEC 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACAATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC < 41bp 1 0.340722787021451 1 0.115805715322495 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051159 nonsynonymous SNV 0.785 4 5 hm5C_associated_SNPs_41939 0 0 44 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr13 20233208 20233208 1 + G A UCEC 20233203 + 20233183 20233223 41 GGATGAAGTTGGAAGATTTCCAAAAGCACCTTGATGGGAAA GGATGAAGTTGGAAGATTTCCAAAAACACCTTGATGGGAAA < 41bp 1 0.686362101574595 1 0.827344715595245 experiment 0.62727579685081 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20233203 chr13:20233208 synonymous SNV . 0 26 hm5C_associated_SNPs_41940 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr13:20233197-20233229
64251 chr14 103802216 103802216 1 + C T UCEC 103802231 + 103802211 103802251 41 TCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG TCAACTGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATG < 41bp 1 0.19156655520101 1 0.0682340264320374 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF5 ENSG00000100664 CDS Human protein_coding chr14:103802231 chr14:103802216 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_41941 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:103801988-103802268
64251 chr5 6746350 6746350 1 + G T UCEC 6746347 + 6746327 6746367 41 TTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCT TTGCATCCAAGAATTGATGCCCGTAGAGCTGATGAAAACCT < 41bp 1 0.12230150175135 1 0.117856800556183 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746347 chr5:6746350 synonymous SNV . 0 24 hm5C_associated_SNPs_41943 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr5:6746337-6746390
64251 chr14 102452882 102452882 1 + C A UCEC 102452896 + 102452876 102452916 41 AACCAGCTTTACCCGTTTGCCATCTCACTGATCGAGAGCGT AACCAGATTTACCCGTTTGCCATCTCACTGATCGAGAGCGT < 41bp 1 0.0686433761273773 1 0.175414979457855 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102452896 chr14:102452882 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_41944 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102452852-102452887
64251 chr17 7401125 7401125 1 + G A UCEC 7401133 + 7401113 7401153 41 GACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGAC GACCAGGTTGGCATGCCCCGCTCCATTGCTGCCAACATGAC < 41bp 1 0.640603462144373 1 0.916956782341003 experiment 0.718793075711255 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7401133 chr17:7401125 nonsynonymous SNV 0.998 3 13 hm5C_associated_SNPs_41947 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr17:7401111-7401135
64251 chr11 62553756 62553756 1 + C T UCEC 62553759 + 62553739 62553779 41 AACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAAC AACGAGTCCTGTACCCATACCTGTCCACCTACTGGACAAAC < 41bp 1 0.0740322815581776 1 0.0321565270423889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62553759 chr11:62553756 nonsynonymous SNV 0.998 2 18 hm5C_associated_SNPs_41948 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:62553748-62553767
64251 chr19 33586713 33586713 1 + C T UCEC 33586722 + 33586702 33586742 41 CCCTGGAAGCTCGGAAGGATCTGAGGTATTGCATGGTGTGA CCCTGGAAGCTTGGAAGGATCTGAGGTATTGCATGGTGTGA < 41bp 1 0.751041376106419 1 0.167417287826538 experiment 0.497917247787162 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33586722 chr19:33586713 nonsynonymous SNV 0.988 2 12 hm5C_associated_SNPs_41949 0 0 4 BUD13 POSTAR2 ENCODE chr19:33586695-33586727
64251 chr19 4013007 4013007 1 + C T UCEC 4013020 + 4013000 4013040 41 ACGAGCTCGTCACCAGGGCCCTCCAGCTGGTGCAGTTTGAC ACGAGCTTGTCACCAGGGCCCTCCAGCTGGTGCAGTTTGAC < 41bp 1 0.578623675371974 1 0.756624579429626 experiment 0.842752649256052 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PIAS4 ENSG00000105229 CDS Human protein_coding chr19:4013020 chr19:4013007 synonymous SNV . 0 8 hm5C_associated_SNPs_41951 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:4012998-4013041
64251 chr4 76711330 76711330 1 + C T UCEC 76711339 + 76711319 76711359 41 CAGAAGTTATTCGAGGCTGCCAAGTAAACCAAGACTACTTT CAGAAGTTATTTGAGGCTGCCAAGTAAACCAAGACTACTTT < 41bp 1 0.365517186792958 1 0.347448140382767 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control USO1 ENSG00000138768 CDS Human protein_coding chr4:76711339 chr4:76711330 stopgain 0.997 1 12 hm5C_associated_SNPs_41952 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:76711305-76711339
64251 chr11 118245893 118245893 1 + C T UCEC 118245886 + 118245866 118245906 41 CTCACCTTTAATCCCACATACTGTGCCCTCAAGGAGTTGAA CTCACCTTTAATCCCACATACTGTGCCTTCAAGGAGTTGAA < 41bp 1 0.183380718929517 1 0.0758862197399139 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118245886 chr11:118245893 nonsynonymous SNV 0.994 3 28 hm5C_associated_SNPs_41953 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:118245876-118245912
64251 chr17 37872134 37872134 1 + C A UCEC 37872129 + 37872109 37872149 41 TGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCAC TGCACACGGTGCCCTGGGACCAGCTATTTCGGAACCCGCAC < 41bp 1 0.553875610065308 1 0.411798536777496 experiment 0.892248779869385 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872129 chr17:37872134 synonymous SNV . 0 26 hm5C_associated_SNPs_41954 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:37872110-37872139
64251 chr16 67314908 67314908 1 + G T UCEC 67314905 + 67314885 67314925 41 GCTGTACCTGCGAAGCATCCCCAGGTTTGAGGGAGGGGGTT GCTGTACCTGCGAAGCATCCCCATGTTTGAGGGAGGGGGTT < 41bp 1 0.103427441091042 1 0.136990904808044 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67314905 chr16:67314908 nonsynonymous SNV 0.963 3 24 hm5C_associated_SNPs_41955 0 0 1 PPIG POSTAR2 ENCODE chr16:67314866-67314908
64251 chr3 182591767 182591767 1 + G T UCEC 182591776 + 182591756 182591796 41 GAAATCAGACAGCGAGTGTGCTGAACAATTGAGGCAGCTTG GAAATCAGACATCGAGTGTGCTGAACAATTGAGGCAGCTTG < 41bp 1 0.458637842426412 1 0.161102533340454 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP11B ENSG00000058063 CDS Human protein_coding chr3:182591776 chr3:182591767 nonsynonymous SNV 0.116 1 12 hm5C_associated_SNPs_41956 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:182591745-182591803
64251 chr14 102792498 102792498 1 + G A UCEC 102792493 + 102792473 102792513 41 GCCCTCAGCTGCTCAGGGTACAGCCGCTTGTGAGAACCGAG GCCCTCAGCTGCTCAGGGTACAGCCACTTGTGAGAACCGAG < 41bp 1 0.268435108283225 1 0.195336163043976 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF839 ENSG00000022976 CDS Human protein_coding chr14:102792493 chr14:102792498 synonymous SNV . 0 26 hm5C_associated_SNPs_41957 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:102792490-102792535
64251 chr9 33313659 33313659 1 + G T UCEC 33313662 + 33313642 33313682 41 GTCTTTACAGGCACACAGTTCGCTGTGGTCAGGCTGTCTCA GTCTTTACAGGCACACATTTCGCTGTGGTCAGGCTGTCTCA < 41bp 1 0.542147072413945 1 0.807722151279449 experiment 0.915705855172111 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33313662 chr9:33313659 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_41960 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33313657-33313677
64251 chr17 29857373 29857373 1 + C T UCEC 29857365 + 29857345 29857385 41 AGAATTATAAGCTGCGGGATCAGAACGACGACTTGAATGGG AGAATTATAAGCTGCGGGATCAGAACGATGACTTGAATGGG < 41bp 1 0.35175150905066 1 0.550864338874817 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAB11FIP4 ENSG00000131242 CDS Human protein_coding chr17:29857365 chr17:29857373 synonymous SNV . 0 29 hm5C_associated_SNPs_41961 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr17:29857346-29857381
64251 chr10 93605610 93605610 1 + A C UCEC 93605612 + 93605592 93605632 41 AGCAGCCCAAAAGGGACGAACACAGCTTTGTGCTTTGTTGC AGCAGCCCAAAAGGGACGCACACAGCTTTGTGCTTTGTTGC < 41bp 1 0.369525432310222 1 0.151111721992493 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNKS2 ENSG00000107854 CDS Human protein_coding chr10:93605612 chr10:93605610 synonymous SNV . 0 19 hm5C_associated_SNPs_41962 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:93605602-93605640
64251 chr5 140084097 140084097 1 + A T UCEC 140084084 + 140084064 140084104 41 GTGAAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAGA GTGAAGAAACGTTTTGAGGTCAACAAGAAGAAGTTGGAAGA < 41bp 1 0.719844662584998 1 0.346966713666916 experiment 0.560310674830003 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084084 chr5:140084097 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_41963 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084097 140084097 1 + A T UCEC 140084087 + 140084067 140084107 41 AAGAAACGTTTTGAGGTCAACAAGAAGAAGATGGAAGAGAA AAGAAACGTTTTGAGGTCAACAAGAAGAAGTTGGAAGAGAA < 41bp 1 0.765508004786561 1 0.555469810962677 experiment 0.468983990426878 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084087 chr5:140084097 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_41964 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084097 140084097 1 + A T UCEC 140084109 + 140084089 140084129 41 AGAAGAAGATGGAAGAGAAGCAGAAGGATTATGATTTTGAG AGAAGAAGTTGGAAGAGAAGCAGAAGGATTATGATTTTGAG < 41bp 1 0.795433460679632 1 0.646987438201904 experiment 0.409133078640735 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084109 chr5:140084097 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_41965 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr19 42398349 42398349 1 + G T UCEC 42398364 + 42398344 42398384 41 GACAAGAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT GACAATAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT < 41bp 1 0.125150237548605 1 0.447215974330902 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42398364 chr19:42398349 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_41967 0 0 2 DDX24 POSTAR2 ENCODE chr19:42398332-42398365
64251 chr11 65063437 65063437 1 + G A UCEC 65063444 + 65063424 65063464 41 TCCTCATCATCCCGTCAGAGCTGAGGTACTTCGTGAAGGTA TCCTCATCATCCCATCAGAGCTGAGGTACTTCGTGAAGGTA < 41bp 1 0.29682996792015 1 0.0581005215644836 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control POLA2 ENSG00000014138 CDS Human protein_coding chr11:65063444 chr11:65063437 synonymous SNV . 0 14 hm5C_associated_SNPs_41968 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:65063423-65063446
64251 chr2 171822300 171822300 1 + G A UCEC 171822305 + 171822285 171822325 41 CCGTTTTTGTCCTAGGTCTGCCACCTCTTCCTTCCATGCCT CCGTTTTTGTCCTAGATCTGCCACCTCTTCCTTCCATGCCT < 41bp 1 0.127527970093027 1 0.0702346861362457 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171822305 chr2:171822300 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_41970 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:171822278-171822327
64251 chr11 4091346 4091346 1 + G A UCEC 4091338 + 4091318 4091358 41 GGCTGCTGGTTTGCCTATATCCAGAACCGTTACTCCAAGGA GGCTGCTGGTTTGCCTATATCCAGAACCATTACTCCAAGGA < 41bp 1 0.673949060429481 1 0.659039676189423 experiment 0.652101879141037 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4091338 chr11:4091346 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_41973 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:4091345-4091346
64251 chr11 67075182 67075182 1 + G A UCEC 67075191 + 67075171 67075211 41 CTGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCGGGTC CTGGAGTCTCTACGGCCTCCCAGCGCCGAGCCTGGCGGGTC < 41bp 1 0.628298825376902 1 0.728013217449188 experiment 0.743402349246196 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075191 chr11:67075182 synonymous SNV . 0 12 hm5C_associated_SNPs_41975 0 0 1 PPIG POSTAR2 ENCODE chr11:67075173-67075183
64251 chr18 13096283 13096283 1 + G A UCEC 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTGGCCAGCGCATTGCCTCACAGTCACGCCACAGCATGGAT < 41bp 1 0.122978274865582 1 0.0866160094738007 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096283 synonymous SNV . 0 31 hm5C_associated_SNPs_41976 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:13096271-13096295
64251 chr1 110586361 110586361 1 + G T UCEC 110586381 + 110586361 110586401 41 GTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG TTCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTG < 41bp 1 0.626952236245856 1 0.159138083457947 experiment 0.746095527508289 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586381 chr1:110586361 nonsynonymous SNV 0.998 2 1 hm5C_associated_SNPs_41977 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110586324-110586382
64251 chr8 26227811 26227811 1 + G T UCEC 26227822 + 26227802 26227842 41 ATGAAATAAGTGTTGACAGCCTAGACTTCAATAAGAAAATC ATGAAATAATTGTTGACAGCCTAGACTTCAATAAGAAAATC < 41bp 1 0.592777201941934 1 0.215752869844437 experiment 0.814445596116133 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26227822 chr8:26227811 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_41978 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26227645-26227833
64251 chr14 75904644 75904644 1 + G A UCEC 75904659 + 75904639 75904679 41 ATCCCGGACCCTTCGGTGACCACAGGCTCCCTGCCAGGGCT ATCCCAGACCCTTCGGTGACCACAGGCTCCCTGCCAGGGCT < 41bp 1 0.750479122584017 1 0.542488217353821 experiment 0.499041754831966 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JDP2 ENSG00000140044 CDS Human protein_coding chr14:75904659 chr14:75904644 synonymous SNV . 0 6 hm5C_associated_SNPs_41979 0 0 1 DDX3X POSTAR2 ENCODE chr14:75904600-75904756
64251 chr20 43052693 43052693 1 + C T UCEC 43052674 + 43052654 43052694 41 GTAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGCG GTAGATGCCAAGGGGCTGAGCGATCCAGGGAAGATCAAGTG < 41bp 1 0.165406028760225 1 0.397149056196213 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052674 chr20:43052693 nonsynonymous SNV 0.998 5 40 hm5C_associated_SNPs_41980 0 0 1 U2AF2 POSTAR2 ENCODE chr20:43052596-43052715
64251 chr7 99751528 99751528 1 + G T UCEC 99751531 + 99751511 99751551 41 TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG TGCTGGTGACGGTGTCATGACAGAGGGTGTTTGTGGTGAAG < 41bp 1 0.746735313777967 1 0.77118992805481 experiment 0.506529372444066 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751531 chr7:99751528 stopgain 1.000 1 18 hm5C_associated_SNPs_41983 0 0 21 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:99751494-99751532
64251 chr10 122664313 122664313 1 + C T UCEC 122664294 + 122664274 122664314 41 CACCATTAAGTTGGTGGCAACGAATATGATTGCCAATGGCA CACCATTAAGTTGGTGGCAACGAATATGATTGCCAATGGTA < 41bp 1 0.201389291460733 1 0.298098653554916 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDR11 ENSG00000120008 CDS Human protein_coding chr10:122664294 chr10:122664313 synonymous SNV . 0 40 hm5C_associated_SNPs_41984 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr10:122664295-122664319
64251 chr9 37357125 37357125 1 + T G UCEC 37357114 + 37357094 37357134 41 AACCCAGAAGCCTTCTAAGCCCTTTCACCGTTCATCACATT AACCCAGAAGCCTTCTAAGCCCTTTCACCGTGCATCACATT < 41bp 1 0.0211927815376013 1 0.0437401831150055 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZCCHC7 ENSG00000147905 CDS Human protein_coding chr9:37357114 chr9:37357125 nonsynonymous SNV 0.003 0 32 hm5C_associated_SNPs_41985 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr9:37357109-37357130
64251 chr4 3205784 3205784 1 + A C UCEC 3205778 + 3205758 3205798 41 GTTACTTAGTCCCCAGATGTCTGGAGAAGAGGAGGATTCTG GTTACTTAGTCCCCAGATGTCTGGAGCAGAGGAGGATTCTG < 41bp 1 0.656414844690216 1 0.850450992584229 experiment 0.687170310619567 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3205778 chr4:3205784 nonsynonymous SNV 0.986 0 27 hm5C_associated_SNPs_41986 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:3205760-3205810
64251 chr22 31485784 31485784 1 + C A UCEC 31485804 + 31485784 31485824 41 CTGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC ATGCGAGCCCCACCTGGGAGCACATCCAGCTCACCTGCCTC < 41bp 1 0.19354141314955 1 0.172720342874527 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMTN ENSG00000183963 CDS Human protein_coding chr22:31485804 chr22:31485784 nonsynonymous SNV 0.923 3 1 hm5C_associated_SNPs_41987 0 0 3 GRWD1 POSTAR2 ENCODE chr22:31485705-31485839
64251 chr11 61505629 61505629 1 + G T UCEC 61505613 + 61505593 61505633 41 CGTTCCCTCCCCAGGATTGGCCTCTCTCAGCTGGAAGGCTT CGTTCCCTCCCCAGGATTGGCCTCTCTCAGCTGGAATGCTT < 41bp 1 0.028293708944796 1 0.0326513350009918 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61505613 chr11:61505629 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_41988 0 0 1 PPIG POSTAR2 ENCODE chr11:61505606-61505688
64251 chr12 112926261 112926261 1 + G A UCEC 112926274 + 112926254 112926294 41 ATTGGCCGGACAGGGACGTTCATTGTGATTGATATTCTTAT ATTGGCCAGACAGGGACGTTCATTGTGATTGATATTCTTAT < 41bp 1 0.144809631366017 1 0.0155549347400665 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926274 chr12:112926261 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_41989 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:112926227-112926265
64251 chr20 4679918 4679918 1 + G A UCEC 4679908 + 4679888 4679928 41 ATGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGGGCCT ATGCTGGTTCTCTTTGTGGCCACATGGAGTAACCTGGGCCT < 41bp 1 0.612488339838592 1 0.804550409317017 experiment 0.775023320322816 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRNP ENSG00000171867 CDS Human protein_coding chr20:4679908 chr20:4679918 nonsynonymous SNV 0.994 2 31 hm5C_associated_SNPs_41991 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:4679886-4679933
64251 chr11 10783513 10783513 1 + G A UCEC 10783524 + 10783504 10783544 41 TTAAAAATGGTGTCCAGCTTCTTTCCAGAGCCTATACTATT TTAAAAATGATGTCCAGCTTCTTTCCAGAGCCTATACTATT < 41bp 1 0.0324571514650097 1 0.0441203117370605 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CTR9 ENSG00000198730 CDS Human protein_coding chr11:10783524 chr11:10783513 nonsynonymous SNV 0.992 4 10 hm5C_associated_SNPs_41992 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:10783510-10783545
64251 chr7 129096288 129096288 1 + C T UCEC 129096284 + 129096264 129096304 41 CCTGTTTCTTCCTTAGTTTACCCTCGGTGGATTTGAGCATC CCTGTTTCTTCCTTAGTTTACCCTTGGTGGATTTGAGCATC < 41bp 1 0.156127709524209 1 0.0543960928916931 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096284 chr7:129096288 synonymous SNV . 0 25 hm5C_associated_SNPs_41994 0 0 5 BUD13 POSTAR2 ENCODE chr7:129096282-129096370
64251 chr4 119200355 119200355 1 + C T UCEC 119200363 + 119200343 119200383 41 ATCTCCATGTATCTTTGGGACCTGTCAGCCGTGGCAGTCTC ATCTCCATGTATTTTTGGGACCTGTCAGCCGTGGCAGTCTC < 41bp 1 0.0737367105923335 1 0.0357979536056519 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200363 chr4:119200355 . . 0 13 hm5C_associated_SNPs_41995 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr4 119200355 119200355 1 + C T UCEC 119200364 + 119200344 119200384 41 TCTCCATGTATCTTTGGGACCTGTCAGCCGTGGCAGTCTCC TCTCCATGTATTTTTGGGACCTGTCAGCCGTGGCAGTCTCC < 41bp 1 0.0891311386546181 1 0.0297324359416962 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200364 chr4:119200355 . . 0 12 hm5C_associated_SNPs_41996 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr4 119200355 119200355 1 + C T UCEC 119200368 + 119200348 119200388 41 CATGTATCTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTC CATGTATTTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTC < 41bp 1 0.540902673739234 1 0.637139022350311 experiment 0.918194652521532 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200368 chr4:119200355 . . 0 8 hm5C_associated_SNPs_41997 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr4 119200355 119200355 1 + C T UCEC 119200371 + 119200351 119200391 41 GTATCTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTA GTATTTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTA < 41bp 1 0.293920248383327 1 0.800353765487671 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200371 chr4:119200355 . . 0 5 hm5C_associated_SNPs_41998 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr4 119200355 119200355 1 + C T UCEC 119200372 + 119200352 119200392 41 TATCTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTAG TATTTTTGGGACCTGTCAGCCGTGGCAGTCTCCCTTCCTAG < 41bp 1 0.538810674018924 1 0.782440662384033 experiment 0.922378651962152 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORA24 ENSG00000269893 ncRNA_exonic Human lincRNA chr4:119200372 chr4:119200355 . . 0 4 hm5C_associated_SNPs_41999 0 0 31 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:119200340-119200360
64251 chr12 3149338 3149338 1 + G C UCEC 3149330 + 3149310 3149350 41 ACCGCATCCACCGGTCCCCGCTCTGTGAGTACATGATCAAC ACCGCATCCACCGGTCCCCGCTCTGTGACTACATGATCAAC < 41bp 1 0.150204680084144 1 0.347613036632538 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3149330 chr12:3149338 nonsynonymous SNV 0.995 1 29 hm5C_associated_SNPs_42000 0 0 1 METAP2 POSTAR2 ENCODE chr12:3149296-3149400
64251 chr4 38937395 38937395 1 + C A UCEC 38937401 + 38937381 38937421 41 GAAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTAC GAAGTTTACGAATTATTTAACCACTGTTGGGGTAAGATTAC < 41bp 1 0.0916483499385153 1 0.120547950267792 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937401 chr4:38937395 nonsynonymous SNV 0.784 1 15 hm5C_associated_SNPs_42001 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr4 38937395 38937395 1 + C A UCEC 38937402 + 38937382 38937422 41 AAGTTTACGAATTCTTTAACCACTGTTGGGGTAAGATTACA AAGTTTACGAATTATTTAACCACTGTTGGGGTAAGATTACA < 41bp 1 0.214225086712407 1 0.187070816755295 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38937402 chr4:38937395 nonsynonymous SNV 0.784 1 14 hm5C_associated_SNPs_42002 0 0 1 GRWD1 POSTAR2 ENCODE chr4:38937390-38937411
64251 chr3 155628661 155628661 1 + C T UCEC 155628644 + 155628624 155628664 41 CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCACGTC CTTGAGTGTATTCGAGAGATCAAAGAGAGAGTAGGCATGTC < 41bp 1 0.494052176075427 1 0.190050572156906 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155628644 chr3:155628661 nonsynonymous SNV 0.998 1 38 hm5C_associated_SNPs_42004 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:155628581-155628664
64251 chr17 4846490 4846490 1 + G A UCEC 4846476 + 4846456 4846496 41 TGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGGTTCCAG TGGTCATCCTTTTCCCAGGGCTCGGGTGCTTCTGATTCCAG < 41bp 1 0.628168949668332 1 0.115374863147736 experiment 0.743662100663337 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846476 chr17:4846490 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_42005 0 0 1 U2AF2 POSTAR2 ENCODE chr17:4846399-4846508
64251 chr12 27908166 27908166 1 + T C UCEC 27908148 + 27908128 27908168 41 GGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGTATATAT GGAAAAAAGTAAGACTGAAGCAGACATGGAAGAGTATACAT < 41bp 1 0.524419864169726 1 0.814183235168457 experiment 0.951160271660548 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27908148 chr12:27908166 nonsynonymous SNV 0.749 0 39 hm5C_associated_SNPs_42006 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27908117-27908173
64251 chr17 37872116 37872116 1 + G A UCEC 37872129 + 37872109 37872149 41 TGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCAC TGCACACAGTGCCCTGGGACCAGCTCTTTCGGAACCCGCAC < 41bp 1 0.47619935106922 1 0.241555601358414 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872129 chr17:37872116 synonymous SNV . 0 8 hm5C_associated_SNPs_42007 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:37872110-37872139
64251 chr22 39773695 39773695 1 + G A UCEC 39773703 + 39773683 39773723 41 GGCACAGCCGTAGGCCTCCCCGGCTTGCAGAGGCCGGCAGC GGCACAGCCGTAAGCCTCCCCGGCTTGCAGAGGCCGGCAGC < 41bp 1 0.405743730222616 1 0.389322638511658 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SYNGR1 ENSG00000100321 CDS Human protein_coding chr22:39773703 chr22:39773695 synonymous SNV . 0 13 hm5C_associated_SNPs_42010 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:39773671-39773709
64251 chr3 38524729 38524729 1 + G A UCEC 38524735 + 38524715 38524755 41 GGTGTCCCTGATTCGGAGGTCGGTCAACGGCACTACCTCGG GGTGTCCCTGATTCAGAGGTCGGTCAACGGCACTACCTCGG < 41bp 1 0.23890483296583 1 0.423007249832153 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACVR2B ENSG00000114739 CDS Human protein_coding chr3:38524735 chr3:38524729 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_42011 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:38524710-38524739
64251 chr3 47374693 47374693 1 + G T UCEC 47374698 + 47374678 47374718 41 ACGACCGGGAGCAGAGGGGTCCCTACCTGCCTGAGCTGCTG ACGACCGGGAGCAGATGGGTCCCTACCTGCCTGAGCTGCTG < 41bp 1 0.317917712688329 1 0.415431201457977 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374698 chr3:47374693 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_42012 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:47374689-47374701
64251 chr2 54858605 54858605 1 + C T UCEC 54858614 + 54858594 54858634 41 ACATGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGA ACATGTTTCTGTGGCAGCGGCTGCAGGCCCTGGACACTGGA < 41bp 1 0.598292123582888 1 0.633755803108215 experiment 0.803415752834225 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858614 chr2:54858605 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_42013 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858605 54858605 1 + C T UCEC 54858617 + 54858597 54858637 41 TGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGG TGTTTCTGTGGCAGCGGCTGCAGGCCCTGGACACTGGATGG < 41bp 1 0.3321666766356 1 0.704983353614807 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858617 chr2:54858605 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_42014 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr2 54858605 54858605 1 + C T UCEC 54858621 + 54858601 54858641 41 TCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGATGGAACG TCTGTGGCAGCGGCTGCAGGCCCTGGACACTGGATGGAACG < 41bp 1 0.174997238703406 1 0.10527765750885 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858621 chr2:54858605 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_42015 0 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr2:54858598-54858637
64251 chr1 45267325 45267325 1 + C T UCEC 45267317 + 45267297 45267337 41 CTGGCCCACATCTGGAAGGCCCGGCACACCCTGTTGGAGCC CTGGCCCACATCTGGAAGGCCCGGCACATCCTGTTGGAGCC < 41bp 1 0.228376033942167 1 0.526292681694031 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267317 chr1:45267325 nonsynonymous SNV 0.993 1 29 hm5C_associated_SNPs_42017 0 0 1 PRPF8 POSTAR2 ENCODE chr1:45267259-45267329
64251 chr9 4697135 4697135 1 + C A UCEC 4697148 + 4697128 4697168 41 TTTTTGTCTGACCATCCATACCTTGTATGTGAAGAAACTGC TTTTTGTATGACCATCCATACCTTGTATGTGAAGAAACTGC < 41bp 1 0.055942349128512 1 0.0593304932117462 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4697148 chr9:4697135 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_42018 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:4697126-4697152
64251 chrX 153677070 153677070 1 + G A UCEC 153677085 + 153677065 153677105 41 CTGCGGCAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG CTGCGACAGGAGTGGGAAGCCAAGCAGGAGAAGATCAAGAG < 41bp 1 0.675442536768906 1 0.748172283172607 experiment 0.649114926462187 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout FAM50A ENSG00000071859 CDS Human protein_coding chrX:153677085 chrX:153677070 synonymous SNV . 0 6 hm5C_associated_SNPs_42019 0 0 6 RBFOX2 POSTAR2 ENCODE chrX:153677067-153677091
64251 chrX 24073093 24073093 1 + G A UCEC 24073094 + 24073074 24073114 41 TCTTTTGGCAACATGGCGGGCGGAGAAGCTGGAGTGACTCT TCTTTTGGCAACATGGCGGACGGAGAAGCTGGAGTGACTCT < 41bp 1 0.68488982497517 1 0.488284826278687 experiment 0.63022035004966 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24073094 chrX:24073093 nonsynonymous SNV 0.485 1 20 hm5C_associated_SNPs_42020 0 0 19 SRSF1 POSTAR2 GSE83923,GSM2221667 chrX:24073080-24073100
64251 chr1 154988762 154988762 1 + C T UCEC 154988768 + 154988748 154988788 41 TCATGCCCGCACTGCCCAGCCCGCTTCCTGCACAGCTACGA TCATGCCCGCACTGTCCAGCCCGCTTCCTGCACAGCTACGA < 41bp 1 0.211119997350988 1 0.104627966880798 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZBTB7B ENSG00000160685 CDS Human protein_coding chr1:154988768 chr1:154988762 synonymous SNV . 0 15 hm5C_associated_SNPs_42021 0 0 1 YBX3 POSTAR2 ENCODE chr1:154988706-154988825
64251 chr19 45495539 45495539 1 + C T UCEC 45495555 + 45495535 45495575 41 AAGTCTGTGGCCCACCTTCCCTGGCGCATGCTCACCTACAA AAGTTTGTGGCCCACCTTCCCTGGCGCATGCTCACCTACAA < 41bp 1 0.749058763447621 1 0.798304557800293 experiment 0.501882473104758 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45495555 chr19:45495539 nonsynonymous SNV 0.983 4 5 hm5C_associated_SNPs_42022 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:45495499-45495563
64251 chr22 40662828 40662828 1 + C T UCEC 40662825 + 40662805 40662845 41 CTGGAGCAGCGGGCCACAGCCTGCAACACCTAAGGATGAGG CTGGAGCAGCGGGCCACAGCCTGTAACACCTAAGGATGAGG < 41bp 1 0.225730839831704 1 0.663787662982941 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TNRC6B ENSG00000100354 CDS Human protein_coding chr22:40662825 chr22:40662828 nonsynonymous SNV 0.521 0 24 hm5C_associated_SNPs_42023 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr22:40662813-40662835
64251 chr19 11213371 11213371 1 + C A UCEC 11213368 + 11213348 11213388 41 ACCTGCAAATCCGGGGACTTCAGCTGTGGGGGCCGTGTCAA ACCTGCAAATCCGGGGACTTCAGATGTGGGGGCCGTGTCAA < 41bp 1 0.585493178460516 1 0.816340923309326 experiment 0.829013643078969 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11213368 chr19:11213371 nonsynonymous SNV 0.976 2 24 hm5C_associated_SNPs_42024 0 0 8 BUD13 POSTAR2 ENCODE chr19:11213337-11213391
64251 chr1 235577774 235577774 1 + G A UCEC 235577765 + 235577745 235577785 41 CAGGCACCCGACAGGAGGATCCTTTATTCGTCCGAACAAGG CAGGCACCCGACAGGAGGATCCTTTATTCATCCGAACAAGG < 41bp 1 0.0139723917652393 1 0.0280433297157288 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235577765 chr1:235577774 nonsynonymous SNV 0.746 4 30 hm5C_associated_SNPs_42025 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:235577754-235577779
64251 chr7 16823105 16823105 1 + G A UCEC 16823094 + 16823074 16823114 41 GAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCTTT GAACCAGAAAGACCCCCGCGCGAATCCTAGTACATTCCTTT < 41bp 1 0.168280452118939 1 0.139124095439911 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823094 chr7:16823105 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_42026 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr7:16823096-16823120
64251 chr2 39009023 39009023 1 + G T UCEC 39009029 + 39009009 39009049 41 AAGGACATCTTACAGCTTCCCAATGAGAGGCCAGGAAGTGT AAGGACATCTTACATCTTCCCAATGAGAGGCCAGGAAGTGT < 41bp 1 0.23329067025673 1 0.199710130691528 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39009029 chr2:39009023 nonsynonymous SNV 0.998 1 15 hm5C_associated_SNPs_42027 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:39008981-39009043
64251 chr1 183519926 183519926 1 + C T UCEC 183519913 + 183519893 183519933 41 AACACCAGCCAGCCAGTCTCCTCATTCCTCTAACCCAAGCA AACACCAGCCAGCCAGTCTCCTCATTCCTCTAATCCAAGCA < 41bp 1 0.306686711129035 1 0.455041706562042 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519913 chr1:183519926 synonymous SNV . 0 34 hm5C_associated_SNPs_42029 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr2 74783924 74783924 1 + T C UCEC 74783942 + 74783922 74783962 41 TTTATGATCTGCCTCGGGAGCCCAAGGATGCATGGTGGTGC TTCATGATCTGCCTCGGGAGCCCAAGGATGCATGGTGGTGC < 41bp 1 0.491239312203435 1 0.106898009777069 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DOK1 ENSG00000115325 CDS Human protein_coding chr2:74783942 chr2:74783924 nonsynonymous SNV 0.999 3 3 hm5C_associated_SNPs_42030 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:74783923-74783924
64251 chr17 72239559 72239559 1 + C A UCEC 72239546 + 72239526 72239566 41 CTCCTGCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGC CTCCTGCTCTTTATCCTGGACCTGGTCATCTGCATCATTGC < 41bp 1 0.116597926130508 1 0.0719596445560455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72239546 chr17:72239559 nonsynonymous SNV 0.679 2 34 hm5C_associated_SNPs_42031 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:72239533-72239564
64251 chr8 17810604 17810604 1 + A C UCEC 17810614 + 17810594 17810634 41 TTTTTAGCAAAATGAGAGTGCTACAGGAAAAGAAACAAAAA TTTTTAGCAACATGAGAGTGCTACAGGAAAAGAAACAAAAA < 41bp 1 0.465870280717853 1 0.460707247257233 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17810614 chr8:17810604 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_42035 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17810595-17810633
64251 chr15 69738627 69738627 1 + G A UCEC 69738626 + 69738606 69738646 41 GTTTCCCCTTTTTCAGTAGTCGAAAACGAAGATCTTCCACA GTTTCCCCTTTTTCAGTAGTCAAAAACGAAGATCTTCCACA < 41bp 1 0.520385707963465 1 0.807718396186829 experiment 0.959228584073071 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69738626 chr15:69738627 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_42036 0 0 13 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:69738608-69738629
64251 chr1 35824621 35824621 1 + G T UCEC 35824625 + 35824605 35824645 41 AATGCCGAATCAAACAGGATCTGAAAATTCATTGCTGGATG AATGCCGAATCAAACATGATCTGAAAATTCATTGCTGGATG < 41bp 1 0.528371421014063 1 0.301513999700546 experiment 0.943257157971875 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824625 chr1:35824621 stopgain 1.000 0 17 hm5C_associated_SNPs_42038 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:35824599-35824646
64251 chr9 35733117 35733117 1 + G A UCEC 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGACCACACCTACTCCCTCCCACAGGAAACTGTCTCTAT < 41bp 1 0.100959047556381 1 0.140310704708099 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733117 nonsynonymous SNV 0.203 0 26 hm5C_associated_SNPs_42039 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733117 35733117 1 + G A UCEC 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGACCACACCTACTCCCTCCCACAGGAAACTGTCTCTATG < 41bp 1 0.232575400944998 1 0.235690295696259 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733117 nonsynonymous SNV 0.203 0 25 hm5C_associated_SNPs_42040 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr14 24773399 24773399 1 + C T UCEC 24773383 + 24773363 24773403 41 GACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTG GACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCTGCTG < 41bp 1 0.167831227228237 1 0.0389314293861389 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOP9 ENSG00000196943 CDS Human protein_coding chr14:24773383 chr14:24773399 synonymous SNV . 0 37 hm5C_associated_SNPs_42041 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr14:24773398-24773399
64251 chr21 46900433 46900433 1 + G A UCEC 46900416 + 46900396 46900436 41 GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCGGGT GAGGGATCTGGCTTCGGGGGCGATCTGGAGGCCCTGCAGGT < 41bp 1 0.0368815289945855 1 0.143819063901901 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900416 chr21:46900433 nonsynonymous SNV 0.181 2 38 hm5C_associated_SNPs_42042 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:46900433-46900434
64251 chr19 50983440 50983440 1 + G A UCEC 50983456 + 50983436 50983476 41 GGAAGCTGGTGGCTATGTCTCCTCCTTTGTCCCTGCGGTGA GGAAACTGGTGGCTATGTCTCCTCCTTTGTCCCTGCGGTGA < 41bp 1 0.123378215376652 1 0.212720781564713 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMC10 ENSG00000161671 CDS Human protein_coding chr19:50983456 chr19:50983440 nonsynonymous SNV 0.918 0 5 hm5C_associated_SNPs_42043 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:50983420-50983440
64251 chr1 87208029 87208029 1 + C T UCEC 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTCTCCTTCCAACCTCAGTGATCTTAAGGAGTGTAG < 41bp 1 0.373294765491603 1 0.18396207690239 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208029 synonymous SNV . 0 27 hm5C_associated_SNPs_42046 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:87208023-87208055
64251 chr9 136216875 136216875 1 + T C UCEC 136216857 + 136216837 136216877 41 GGCCCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGTCC GGCCCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGCCC < 41bp 1 0.79036941860804 1 0.32801616191864 experiment 0.41926116278392 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216857 chr9:136216875 nonsynonymous SNV 0.867 0 39 hm5C_associated_SNPs_42047 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216875 136216875 1 + T C UCEC 136216860 + 136216840 136216880 41 CCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGTCCCAA CCGGGCCGAGAAGAAGGCTGCTGGCAAAGGGGACGCCCCAA < 41bp 1 0.680333379058468 1 0.422688543796539 experiment 0.639333241883063 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216860 chr9:136216875 nonsynonymous SNV 0.867 0 36 hm5C_associated_SNPs_42048 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216875 136216875 1 + T C UCEC 136216873 + 136216853 136216893 41 AAGGCTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACC AAGGCTGCTGGCAAAGGGGACGCCCCAACGAAGAGACCACC < 41bp 1 0.286908548559716 1 0.206764131784439 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216873 chr9:136216875 nonsynonymous SNV 0.867 0 23 hm5C_associated_SNPs_42049 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216875 136216875 1 + T C UCEC 136216877 + 136216857 136216897 41 CTGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTC CTGCTGGCAAAGGGGACGCCCCAACGAAGAGACCACCTGTC < 41bp 1 0.161433919928065 1 0.0574875473976135 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216877 chr9:136216875 nonsynonymous SNV 0.867 0 19 hm5C_associated_SNPs_42050 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr9 136216875 136216875 1 + T C UCEC 136216878 + 136216858 136216898 41 TGCTGGCAAAGGGGACGTCCCAACGAAGAGACCACCTGTCC TGCTGGCAAAGGGGACGCCCCAACGAAGAGACCACCTGTCC < 41bp 1 0.729536935552709 1 0.211784243583679 experiment 0.540926128894581 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL7A ENSG00000148303 CDS Human protein_coding chr9:136216878 chr9:136216875 nonsynonymous SNV 0.867 0 18 hm5C_associated_SNPs_42051 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:136216871-136216895
64251 chr6 31914181 31914181 1 + G A UCEC 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGAC < 41bp 1 0.731499797172349 1 0.985383987426758 experiment 0.537000405655302 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914181 synonymous SNV . 0 40 hm5C_associated_SNPs_42052 0 0 4 DDX3X POSTAR2 ENCODE chr6:31914165-31914220
64251 chr4 79420914 79420914 1 + G A UCEC 79420912 + 79420892 79420932 41 GAAGAAGCTGCATACCAAGTCCGGGAACCCGCAGGCCCAGA GAAGAAGCTGCATACCAAGTCCAGGAACCCGCAGGCCCAGA < 41bp 1 0.141355189047963 1 0.325248271226883 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79420912 chr4:79420914 nonsynonymous SNV 0.982 3 23 hm5C_associated_SNPs_42053 0 0 1 EIF3H POSTAR2 ENCODE chr4:79420887-79420932
64251 chr7 4796680 4796680 1 + C A UCEC 4796673 + 4796653 4796693 41 ACCGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCT ACCGTTACTTTATCAAAGTCCCACGTTACCAGGAGGAGCCT < 41bp 1 0.0866030051298331 1 0.0443016886711121 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FOXK1 ENSG00000164916 CDS Human protein_coding chr7:4796673 chr7:4796680 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_42054 0 0 7 LIN28A POSTAR2 GSE39873,GSM980594 chr7:4796660-4796680
64251 chr1 214832259 214832259 1 + G A UCEC 214832258 + 214832238 214832278 41 GAAGAACAACCATGGCAACTCGGACCAGCCCCCGCCTGGCT GAAGAACAACCATGGCAACTCAGACCAGCCCCCGCCTGGCT < 41bp 1 0.282478063784581 1 0.147308707237244 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214832258 chr1:214832259 nonsynonymous SNV 0.746 3 22 hm5C_associated_SNPs_42055 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214832218-214832265
64251 chr10 131943489 131943489 1 + T C UCEC 131943482 + 131943462 131943502 41 AATTGATTTACAGGTCCCTCCTTGTGGTCCATTTCTGGGCA AATTGATTTACAGGTCCCTCCTTGTGGCCCATTTCTGGGCA < 41bp 1 0.446934074776589 1 0.24248406291008 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131943482 chr10:131943489 nonsynonymous SNV 0.996 1 28 hm5C_associated_SNPs_42056 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:131943480-131943500
64251 chr15 64792165 64792165 1 + C T UCEC 64792174 + 64792154 64792194 41 CAGAAAAGGATCCTGGGGTCCTCCAGCCAGTTCCCTTGGGA CAGAAAAGGATTCTGGGGTCCTCCAGCCAGTTCCCTTGGGA < 41bp 1 0.524303468621048 1 0.862911641597748 experiment 0.951393062757903 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64792174 chr15:64792165 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_42060 0 0 6 EIF3H POSTAR2 ENCODE chr15:64792152-64792314
64251 chr11 94532779 94532779 1 + G A UCEC 94532760 + 94532740 94532780 41 TGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCACGG TGCAGGACCAGCCCATCCTACAAACAACTTTTCTTCCACAG < 41bp 1 0.174436297723984 1 0.351614266633987 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94532760 chr11:94532779 synonymous SNV . 0 40 hm5C_associated_SNPs_42061 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr11:94532745-94532779
64251 chr7 150771236 150771236 1 + C T UCEC 150771233 + 150771213 150771253 41 AGACCCACGCTGGGGCCGGGCAACAGGAGCTTGGCTGGGCA AGACCCACGCTGGGGCCGGGCAATAGGAGCTTGGCTGGGCA < 41bp 1 0.413086310234942 1 0.387870073318481 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771233 chr7:150771236 synonymous SNV . 0 24 hm5C_associated_SNPs_42062 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr7:150771235-150771236
64251 chr1 236711367 236711367 1 + G A UCEC 236711377 + 236711357 236711397 41 GGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCT GGCGTACACAACCTGGAGTACAAACACAGATTTAAAGAGCT < 41bp 1 0.0701361915310231 1 0.14209920167923 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711377 chr1:236711367 nonsynonymous SNV 0.977 0 11 hm5C_associated_SNPs_42063 0 0 2 RPS3 POSTAR2 ENCODE chr1:236711321-236711387
64251 chr6 31605017 31605017 1 + C T UCEC 31605013 + 31604993 31605033 41 ACGCCCTTCTTCCCTTAGGTCCTTCTCTGGCCTCAATTCCC ACGCCCTTCTTCCCTTAGGTCCTTTTCTGGCCTCAATTCCC < 41bp 1 0.101488984524478 1 0.0397774577140808 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31605013 chr6:31605017 synonymous SNV . 0 25 hm5C_associated_SNPs_42064 0 0 9 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31604980-31605040
64251 chr1 198233314 198233314 1 + A G UCEC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTCATTGAAGATAATGAACTGAA < 41bp 1 0.130961369856952 1 0.344748854637146 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233314 synonymous SNV . 0 39 hm5C_associated_SNPs_42065 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:198233293-198233349
64251 chr8 9564450 9564450 1 + C T UCEC 9564436 + 9564416 9564456 41 TAGCCATGGCGCTGATCCTACATTAGTCAACTGCCATGGCA TAGCCATGGCGCTGATCCTACATTAGTCAACTGCTATGGCA < 41bp 1 0.312236174025833 1 0.0221323072910309 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9564436 chr8:9564450 nonsynonymous SNV 0.999 3 35 hm5C_associated_SNPs_42066 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr8:9564444-9564454
64251 chr1 153724862 153724862 1 + G T UCEC 153724860 + 153724840 153724880 41 AAGATATTATCCATAATCCTCAGGCCTTGAGTCCTCAGTTC AAGATATTATCCATAATCCTCATGCCTTGAGTCCTCAGTTC < 41bp 1 0.411897240699626 1 0.233195573091507 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout INTS3 ENSG00000143624 CDS Human protein_coding chr1:153724860 chr1:153724862 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_42067 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153724842-153724868
64251 chr19 11559902 11559902 1 + C A UCEC 11559894 + 11559874 11559914 41 CCCTGTGTCTCTCACAGCACCTGGGGCTCATGGATTGGCCC CCCTGTGTCTCTCACAGCACCTGGGGCTAATGGATTGGCCC < 41bp 1 0.747473496328905 1 0.733530521392822 experiment 0.505053007342191 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559894 chr19:11559902 stopgain 0.959 0 29 hm5C_associated_SNPs_42069 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:11559901-11559902
64251 chr17 38152551 38152551 1 + G A UCEC 38152535 + 38152515 38152555 41 ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCACATC < 41bp 1 0.317531055854532 1 0.179141014814377 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38152535 chr17:38152551 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_42070 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:38152526-38152568
64251 chr17 34001247 34001247 1 + C A UCEC 34001266 + 34001246 34001286 41 ACTCACCGCCAAGGGCACATCTATATGGAAATGAACTTCAC AATCACCGCCAAGGGCACATCTATATGGAAATGAACTTCAC < 41bp 1 0.500833985401312 1 0.674835920333862 experiment 0.998332029197375 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP2B1 ENSG00000006125 CDS Human protein_coding chr17:34001266 chr17:34001247 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_42073 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:34001240-34001280
64251 chr16 72139443 72139443 1 + G A UCEC 72139447 + 72139427 72139467 41 CGTTCGGAAGTGCATCGTTGCCACCAATATTGCCGAGACGT CGTTCGGAAGTGCATCATTGCCACCAATATTGCCGAGACGT < 41bp 1 0.0793011361980715 1 0.0600351989269257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72139447 chr16:72139443 nonsynonymous SNV 0.988 4 17 hm5C_associated_SNPs_42075 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:72139443-72139469
64251 chr1 87805776 87805776 1 + G A UCEC 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCGCCTGGTCCCGGGAGATCAGTTTCACTACATCAATGGC < 41bp 1 0.331178117522185 1 0.287450551986694 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805776 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_42076 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr2 211465341 211465341 1 + G A UCEC 211465360 + 211465340 211465380 41 AGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTT AATTGAGTCCATTATGGCTACGGAAGACAGGCAGCTGTTTT < 41bp 1 0.497363331960359 1 0.740393996238708 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CPS1 ENSG00000021826 CDS Human protein_coding chr2:211465360 chr2:211465341 nonsynonymous SNV 0.997 2 2 hm5C_associated_SNPs_42079 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:211465314-211465352
64251 chr17 46128902 46128902 1 + G A UCEC 46128901 + 46128881 46128921 41 CAGGCCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAG CAGGCCCAGACAACGGGGTGCAAGAAAGCGAAACGGAGCAG < 41bp 1 0.629864108086518 1 0.233622461557388 experiment 0.740271783826965 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128901 chr17:46128902 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_42080 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr17 46128902 46128902 1 + G A UCEC 46128909 + 46128889 46128929 41 GACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGG GACAACGGGGTGCAAGAAAGCGAAACGGAGCAGGGATTCGG < 41bp 1 0.714876007291011 1 0.660530686378479 experiment 0.570247985417979 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128909 chr17:46128902 nonsynonymous SNV 0.998 2 14 hm5C_associated_SNPs_42081 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr17 46128902 46128902 1 + G A UCEC 46128914 + 46128894 46128934 41 CGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAG CGGGGTGCAAGAAAGCGAAACGGAGCAGGGATTCGGTGAAG < 41bp 1 0.584166687573062 1 0.834227681159973 experiment 0.831666624853876 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128914 chr17:46128902 nonsynonymous SNV 0.998 2 9 hm5C_associated_SNPs_42082 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr17 46128902 46128902 1 + G A UCEC 46128919 + 46128899 46128939 41 TGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTG TGCAAGAAAGCGAAACGGAGCAGGGATTCGGTGAAGATTTG < 41bp 1 0.643970028982942 1 0.67047107219696 experiment 0.712059942034117 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128919 chr17:46128902 nonsynonymous SNV 0.998 2 4 hm5C_associated_SNPs_42083 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr11 43908165 43908165 1 + T C UCEC 43908156 + 43908136 43908176 41 TGTTTCCTTTGTTTCTTTAGCAGAGAGGGTGTGTATGAAAT TGTTTCCTTTGTTTCTTTAGCAGAGAGGGCGTGTATGAAAT < 41bp 1 0.50025803279165 1 0.545542895793915 experiment 0.9994839344167 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43908156 chr11:43908165 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_42085 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:43908153-43908177
64251 chr5 169127061 169127061 1 + G T UCEC 169127059 + 169127039 169127079 41 TGCTGGTGGGTGACATCATTCAGATTCGCAAGGACTATCCA TGCTGGTGGGTGACATCATTCATATTCGCAAGGACTATCCA < 41bp 1 0.18164363951445 1 0.107817590236664 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127059 chr5:169127061 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_42087 0 0 3 DDX24 POSTAR2 ENCODE chr5:169127026-169127118
64251 chr17 37360824 37360824 1 + C T UCEC 37360807 + 37360787 37360827 41 TGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCC TGAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGTGCC < 41bp 1 0.481947688967141 1 0.528961181640625 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360807 chr17:37360824 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_42089 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360824 37360824 1 + C T UCEC 37360808 + 37360788 37360828 41 GAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCCG GAGGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGTGCCG < 41bp 1 0.738648698093211 1 0.749774396419525 experiment 0.522702603813577 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360808 chr17:37360824 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_42090 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360824 37360824 1 + C T UCEC 37360816 + 37360796 37360836 41 CAGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGC CAGGTCTAAGACCAAGGAAGCACGCAAGTGCCGTGAAGAGC < 41bp 1 0.416736895477475 1 0.174070477485657 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360816 chr17:37360824 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_42091 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360824 37360824 1 + C T UCEC 37360820 + 37360800 37360840 41 TCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGCCT TCTAAGACCAAGGAAGCACGCAAGTGCCGTGAAGAGCGCCT < 41bp 1 0.721325843209051 1 0.619476675987244 experiment 0.557348313581897 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360820 chr17:37360824 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_42092 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr12 27835610 27835610 1 + G T UCEC 27835622 + 27835602 27835642 41 GGGTTGATGGTCGAATGCTACATTACATGACTGTTGTAAGT GGGTTGATTGTCGAATGCTACATTACATGACTGTTGTAAGT < 41bp 1 0.185580571078787 1 0.222742825746536 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27835622 chr12:27835610 nonsynonymous SNV 0.993 3 9 hm5C_associated_SNPs_42093 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27835580-27835611
64251 chr10 5147789 5147789 1 + T G UCEC 5147798 + 5147778 5147818 41 TTCTGATAGGTTTTTGAGTTCCAGTTGACTGCAGAGGACAT TTCTGATAGGTGTTTGAGTTCCAGTTGACTGCAGAGGACAT < 41bp 1 0.228266109220342 1 0.146257400512695 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5147798 chr10:5147789 synonymous SNV . 0 12 hm5C_associated_SNPs_42094 0 0 1 RPS3 POSTAR2 ENCODE chr10:5147789-5147850
64251 chr11 110333083 110333083 1 + G A UCEC 110333093 + 110333073 110333113 41 TACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATC TACAGATCACAGTTGGGCTGCCAAATCTGTTTGACAAAATC < 41bp 1 0.177528576013938 1 0.153972715139389 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333093 chr11:110333083 nonsynonymous SNV 0.897 3 11 hm5C_associated_SNPs_42095 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr11 110333083 110333083 1 + G A UCEC 110333094 + 110333074 110333114 41 ACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATCT ACAGATCACAGTTGGGCTGCCAAATCTGTTTGACAAAATCT < 41bp 1 0.191054596365523 1 0.43353483080864 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333094 chr11:110333083 nonsynonymous SNV 0.897 3 10 hm5C_associated_SNPs_42096 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr15 41555005 41555005 1 + C T UCEC 41554985 + 41554965 41555005 41 TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGC TAAACTTCCGTGGATTCATGCGAACTTTGGCTCATTTCCGT < 41bp 1 0.237579278366877 1 0.166997134685516 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHP1 ENSG00000187446 CDS Human protein_coding chr15:41554985 chr15:41555005 synonymous SNV . 0 41 hm5C_associated_SNPs_42104 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:41554981-41555009
64251 chr3 47891215 47891215 1 + C T UCEC 47891200 + 47891180 47891220 41 CAGCGTCTTCGTCCGGGACTCCTCTCAGGTGCACCCGCTAG CAGCGTCTTCGTCCGGGACTCCTCTCAGGTGCACCTGCTAG < 41bp 1 0.0888043384912913 1 0.184582769870758 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47891200 chr3:47891215 nonsynonymous SNV 0.986 4 36 hm5C_associated_SNPs_42105 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:47891180-47891240
64251 chr12 104327990 104327990 1 + G A UCEC 104327970 + 104327950 104327990 41 ATTGTCACTTCAAAACACAACAACGATACCCAGCACATCTG ATTGTCACTTCAAAACACAACAACGATACCCAGCACATCTA < 41bp 1 0.468476355022858 1 0.136727899312973 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327970 chr12:104327990 stopgain 1.000 1 41 hm5C_associated_SNPs_42106 0 0 34 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:104327959-104328031
64251 chr16 30750666 30750666 1 + G A UCEC 30750662 + 30750642 30750682 41 TGGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACA TGGACTTAGCAGATAGCGGGCCAGACGGGTTGGAATTGACA < 41bp 1 0.24295791499758 1 0.10236868262291 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750662 chr16:30750666 nonsynonymous SNV 0.814 2 25 hm5C_associated_SNPs_42107 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr16 30750666 30750666 1 + G A UCEC 30750663 + 30750643 30750683 41 GGACTTAGCAGATAGCGGGCCAGGCGGGTTGGAATTGACAC GGACTTAGCAGATAGCGGGCCAGACGGGTTGGAATTGACAC < 41bp 1 0.224144776857976 1 0.144154459238052 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30750663 chr16:30750666 nonsynonymous SNV 0.814 2 24 hm5C_associated_SNPs_42108 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30750600-30750680
64251 chr19 59060603 59060603 1 + T C UCEC 59060584 + 59060564 59060604 41 GAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTC GAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGCC < 41bp 1 0.472618400089445 1 0.488364338874817 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060584 chr19:59060603 nonsynonymous SNV 0.981 1 40 hm5C_associated_SNPs_42109 0 0 3 FXR2 POSTAR2 ENCODE chr19:59060601-59060606
64251 chr19 59060603 59060603 1 + T C UCEC 59060588 + 59060568 59060608 41 CCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGG CCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGCCAAGG < 41bp 1 0.508408295488755 1 0.0379734635353088 experiment 0.983183409022491 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060588 chr19:59060603 nonsynonymous SNV 0.981 1 36 hm5C_associated_SNPs_42110 0 0 3 FXR2 POSTAR2 ENCODE chr19:59060601-59060606
64251 chr19 59060603 59060603 1 + T C UCEC 59060592 + 59060572 59060612 41 GGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGGTAAG GGTGCCCCACCCCTGGCTGGCATGGCCATTGCCAAGGTAAG < 41bp 1 0.163876698234841 1 0.115292102098465 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59060592 chr19:59060603 nonsynonymous SNV 0.981 1 32 hm5C_associated_SNPs_42111 0 0 3 FXR2 POSTAR2 ENCODE chr19:59060601-59060606
64251 chr19 7620632 7620632 1 + G A UCEC 7620645 + 7620625 7620665 41 GCAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA GCAGCGGACCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGA < 41bp 1 0.239650591445894 1 0.412064582109451 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620645 chr19:7620632 nonsynonymous SNV 0.995 1 8 hm5C_associated_SNPs_42112 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chr19 7620632 7620632 1 + G A UCEC 7620646 + 7620626 7620666 41 CAGCGGGCCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG CAGCGGACCCGGGAGTGGGCCAAGGTGTGTGTTGCGAGGAG < 41bp 1 0.486198993263917 1 0.721481084823608 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7620646 chr19:7620632 nonsynonymous SNV 0.995 1 7 hm5C_associated_SNPs_42113 0 0 1 FXR2 POSTAR2 ENCODE chr19:7620599-7620644
64251 chrX 135593004 135593004 1 + G T UCEC 135593020 + 135593000 135593040 41 CTGAGAGGATGGGAGGCTTTCCTCAATGCTCCTGAGGCCAA CTGATAGGATGGGAGGCTTTCCTCAATGCTCCTGAGGCCAA < 41bp 1 0.486245514706849 1 0.384057372808456 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593020 chrX:135593004 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_42116 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chrX:135592983-135593033
64251 chr6 44116555 44116555 1 + T G UCEC 44116536 + 44116516 44116556 41 CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTCATC CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTCAGC < 41bp 1 0.0932623862785064 1 0.484518468379974 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116536 chr6:44116555 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_42117 0 0 3 IGF2BP1 POSTAR2 ENCODE chr6:44116545-44116584
64251 chr2 220072116 220072116 1 + G A UCEC 220072099 + 220072079 220072119 41 CAGGCATCTTCTGCGCAGACCATGTGGCCTACGCCCAGCAT CAGGCATCTTCTGCGCAGACCATGTGGCCTACGCCCAACAT < 41bp 1 0.336562606311716 1 0.123378992080688 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072099 chr2:220072116 synonymous SNV . 0 38 hm5C_associated_SNPs_42118 0 0 2 DDX3X POSTAR2 ENCODE chr2:220072076-220072123
64251 chr15 44085917 44085917 1 + G T UCEC 44085898 + 44085878 44085918 41 CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGA CTCCCAGTGCCCCATCATCTCTACCCCCAGGGACTCGGATA < 41bp 1 0.297185258061274 1 0.0395390093326569 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085898 chr15:44085917 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_42120 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:44085900-44085920
64251 chr15 44085917 44085917 1 + G T UCEC 44085902 + 44085882 44085922 41 CAGTGCCCCATCATCTCTACCCCCAGGGACTCGGAGATCAT CAGTGCCCCATCATCTCTACCCCCAGGGACTCGGATATCAT < 41bp 1 0.295758904939107 1 0.0997720658779144 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SERF2 ENSG00000140264 CDS Human protein_coding chr15:44085902 chr15:44085917 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_42121 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:44085900-44085920
64251 chr4 128811314 128811314 1 + C T UCEC 128811297 + 128811277 128811317 41 GACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATCGTA GACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATTGTA < 41bp 1 0.625036591997679 1 0.273236632347107 experiment 0.749926816004641 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811297 chr4:128811314 nonsynonymous SNV 0.938 0 38 hm5C_associated_SNPs_42122 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:128811286-128811340
64251 chr17 46128610 46128610 1 + C A UCEC 46128592 + 46128572 46128612 41 ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCATG < 41bp 1 0.113549552716603 1 0.0631169080734253 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128592 chr17:46128610 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_42123 0 0 6 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:46128585-46128611
64251 chr2 113325662 113325662 1 + C A UCEC 113325644 + 113325624 113325664 41 ATTGTTCCTTTTTACCACTCCTTGTAGACTGGTACGGCCTG ATTGTTCCTTTTTACCACTCCTTGTAGACTGGTACGGCATG < 41bp 1 0.155910605197326 1 0.117488980293274 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113325644 chr2:113325662 nonsynonymous SNV 0.997 5 39 hm5C_associated_SNPs_42125 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:113325641-113325667
64251 chr16 72139465 72139465 1 + C T UCEC 72139447 + 72139427 72139467 41 CGTTCGGAAGTGCATCGTTGCCACCAATATTGCCGAGACGT CGTTCGGAAGTGCATCGTTGCCACCAATATTGCCGAGATGT < 41bp 1 0.0571973127763596 1 0.0538067519664764 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72139447 chr16:72139465 nonsynonymous SNV 0.972 4 39 hm5C_associated_SNPs_42126 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:72139443-72139469
64251 chr1 10239548 10239548 1 + C A UCEC 10239562 + 10239542 10239582 41 ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCCCTT ATCATCATGCGGCACCTGCTCAACTCCCCCACGGACCCCTT < 41bp 1 0.491366156981004 1 0.342719674110413 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10239562 chr1:10239548 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_42127 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:10239521-10239550
64251 chr10 75526829 75526829 1 + G A UCEC 75526835 + 75526815 75526855 41 GCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCT GCTGAGTGTGCAGGAAAGCTCTTTCTATTCCATACATCCCT < 41bp 1 0.116424123438721 1 0.0887628495693207 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75526835 chr10:75526829 synonymous SNV . 0 15 hm5C_associated_SNPs_42129 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr10:75526801-75526829
64251 chr10 75526829 75526829 1 + G A UCEC 75526839 + 75526819 75526859 41 AGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCC AGTGTGCAGGAAAGCTCTTTCTATTCCATACATCCCTGCCC < 41bp 1 0.308136071381884 1 0.18769234418869 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75526839 chr10:75526829 synonymous SNV . 0 11 hm5C_associated_SNPs_42130 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr10:75526801-75526829
64251 chr5 33461363 33461363 1 + T G UCEC 33461353 + 33461333 33461373 41 AACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGAT AACTAAACCTTTCTACTCGCCCGGAAAAATGCCTTGGAGAT < 41bp 1 0.455416220631318 1 0.199837535619736 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33461353 chr5:33461363 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_42131 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:33461321-33461367
64251 chrX 48564769 48564769 1 + C T UCEC 48564763 + 48564743 48564783 41 GACGTGTACACCGTGGATGCCGCCTACTATGGCAACATCTC GACGTGTACACCGTGGATGCCGCCTATTATGGCAACATCTC < 41bp 1 0.335490720848188 1 0.20716181397438 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564763 chrX:48564769 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_42133 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:48564761-48564771
64251 chr11 65269085 65269085 1 + A G UCEC 65269082 + 65269062 65269102 41 AGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAG AGATGCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGAG < 41bp 1 0.284728169193814 1 0.38245415687561 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269082 chr11:65269085 . . 0 24 hm5C_associated_SNPs_42134 0 0 111 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65266540-65270640
64251 chr11 65269085 65269085 1 + A G UCEC 65269086 + 65269066 65269106 41 GCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTA GCTATAGTACTATTGACAAGCTGGGTTAGAGAAGGAGTGTA < 41bp 1 0.717749043149877 1 0.477365136146545 experiment 0.564501913700245 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269086 chr11:65269085 . . 0 20 hm5C_associated_SNPs_42135 0 0 111 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65266540-65270640
64251 chr10 24816977 24816977 1 + A C UCEC 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAACTCTGGAGATGCCGCCAGCCACAGGCCCACTG < 41bp 1 0.170102322113653 1 0.212923467159271 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24816977 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_42136 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24816977 24816977 1 + A C UCEC 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAACTCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA < 41bp 1 0.21599866929249 1 0.770004034042358 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24816977 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_42137 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chrX 73042696 73042696 1 - G A UCEC 73042691 - 73042671 73042711 41 TAGCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT TAGCTGTGATATGTTTGATACTAAGGAAAAACTAAACAGAT < 41bp 1 0.176961722285014 1 0.430322498083115 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042691 chrX:73042696 . . 0 16 hm5C_associated_SNPs_42140 0 0 62 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr5 162905764 162905764 1 + G A UCEC 162905772 + 162905752 162905792 41 AAAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACT AAAAGTATGACAATATGGTGCAAAGCCTTGAAGATGTTACT < 41bp 1 0.259690932598672 1 0.175862610340118 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HMMR ENSG00000072571 CDS Human protein_coding chr5:162905772 chr5:162905764 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_42141 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:162905745-162905789
64251 chr11 120957738 120957738 1 + C A UCEC 120957753 + 120957733 120957773 41 CAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG CAGCTATCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG < 41bp 1 0.034473216595676 1 0.0714091956615448 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957753 chr11:120957738 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_42142 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:120957733-120957760
64251 chr2 178378625 178378625 1 + T G UCEC 178378621 + 178378601 178378641 41 GAAGGGTGTTCAGTTTGCTCCTTTTTCTACATGCAGGTAAG GAAGGGTGTTCAGTTTGCTCCTTTGTCTACATGCAGGTAAG < 41bp 1 0.064305005051175 1 0.128764569759369 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGPS ENSG00000018510 CDS Human protein_coding chr2:178378621 chr2:178378625 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_42144 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:178378607-178378802
64251 chr17 41345581 41345581 1 + G A UCEC 41345576 + 41345556 41345596 41 TATCATAGTAGATCCTTTCCCCTCCGAAGAGAGCCCTGATA TATCATAGTAGATCCTTTCCCCTCCAAAGAGAGCCCTGATA < 41bp 1 0.110479846518467 1 0.242188572883606 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345576 chr17:41345581 nonsynonymous SNV 0.126 0 26 hm5C_associated_SNPs_42145 0 0 4 BUD13 POSTAR2 ENCODE chr17:41345561-41345590
64251 chr6 7583144 7583144 1 + G A UCEC 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCAG < 41bp 1 0.0758096059848911 1 0.117117673158646 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583144 synonymous SNV . 0 40 hm5C_associated_SNPs_42146 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr6 151671187 151671187 1 + C A UCEC 151671207 + 151671187 151671227 41 CTCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC ATCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCTGCC < 41bp 1 0.636183735369522 1 0.721081018447876 experiment 0.727632529260956 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671207 chr6:151671187 nonsynonymous SNV 0.140 3 1 hm5C_associated_SNPs_42147 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151671164-151671203
64251 chr2 27438235 27438235 1 + C A UCEC 27438244 + 27438224 27438264 41 GTCCAAACTTTCATCAGGCACATACCACTGTCATCATGTAA GTCCAAACTTTAATCAGGCACATACCACTGTCATCATGTAA < 41bp 1 0.0470882954479984 1 0.0832727253437042 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATRAID ENSG00000138085 CDS Human protein_coding chr2:27438244 chr2:27438235 nonsynonymous SNV 0.508 0 12 hm5C_associated_SNPs_42149 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:27438206-27438238
64251 chr1 44087623 44087623 1 + C T UCEC 44087609 + 44087589 44087629 41 GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGCTACCGT GCCCCCTATCCTGGCAGGACCAGTATCAGCTGTGTTACCGT < 41bp 1 0.34037300708931 1 0.273751139640808 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44087609 chr1:44087623 synonymous SNV . 0 35 hm5C_associated_SNPs_42150 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:44087620-44087639
64251 chr19 44732659 44732659 1 + G A UCEC 44732653 + 44732633 44732673 41 TCTCCAGGGAGGAACTGCGACTGCTCGATCTTACCCAGAGG TCTCCAGGGAGGAACTGCGACTGCTCAATCTTACCCAGAGG < 41bp 1 0.64295359412612 1 0.419205486774445 experiment 0.714092811747761 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44732653 chr19:44732659 nonsynonymous SNV 0.318 3 27 hm5C_associated_SNPs_42151 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:44732659-44732684
64251 chr10 45486405 45486405 1 + A C UCEC 45486398 + 45486378 45486418 41 AACCACCTTCTTTTTCAGAGCGGACAAAATTAAAAGACTGC AACCACCTTCTTTTTCAGAGCGGACAACATTAAAAGACTGC < 41bp 1 0.068174993335691 1 0.352331697940826 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486398 chr10:45486405 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_42152 0 0 1 PPIG POSTAR2 ENCODE chr10:45486401-45486521
64251 chr1 118499759 118499759 1 + A C UCEC 118499775 + 118499755 118499795 41 AACGAATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG AACGCATTCATTCAGCTGGGCTCTGATGTTGAACTTATATG < 41bp 1 0.145097441034538 1 0.0528576970100403 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR3 ENSG00000065183 CDS Human protein_coding chr1:118499775 chr1:118499759 nonsynonymous SNV 0.749 0 5 hm5C_associated_SNPs_42164 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:118499718-118499779
64251 chr19 7604936 7604936 1 + G T UCEC 7604931 + 7604911 7604951 41 CCTCTGAAGTGCTTTATATGCTCAAGAACGTCCGGTCAGTG CCTCTGAAGTGCTTTATATGCTCAATAACGTCCGGTCAGTG < 41bp 1 0.653646372848253 1 0.587534308433533 experiment 0.692707254303494 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7604931 chr19:7604936 nonsynonymous SNV 0.998 4 26 hm5C_associated_SNPs_42165 0 0 2 PPIG POSTAR2 ENCODE chr19:7604932-7604944
64251 chrX 70344188 70344188 1 + G A UCEC 70344193 + 70344173 70344213 41 TTTGATGATCCTGCCGATGACCCAGAGCACAAGGAGGCTGA TTTGATGATCCTGCCAATGACCCAGAGCACAAGGAGGCTGA < 41bp 1 0.332704701686871 1 0.0526464581489563 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70344193 chrX:70344188 nonsynonymous SNV 0.920 2 16 hm5C_associated_SNPs_42166 0 0 3 DDX24 POSTAR2 ENCODE chrX:70344176-70344218
64251 chr20 36662483 36662483 1 + A G UCEC 36662465 + 36662445 36662485 41 CCACCGCAAGCACGCGGGACCCATCGTCTCCGTGTGGCACC CCACCGCAAGCACGCGGGACCCATCGTCTCCGTGTGGCGCC < 41bp 1 0.175090812502842 1 0.0379385650157928 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPRD1B ENSG00000101413 CDS Human protein_coding chr20:36662465 chr20:36662483 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_42167 0 0 5 BUD13 POSTAR2 ENCODE chr20:36662415-36662560
64251 chr17 66033533 66033533 1 + C G UCEC 66033520 + 66033500 66033540 41 CAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGC CAATGTGGAGCTGAGGAAAGCTAAGAAGGATGAGCAGATGC < 41bp 1 0.563861311071983 1 0.154534250497818 experiment 0.872277377856034 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033520 chr17:66033533 nonsynonymous SNV 0.895 0 34 hm5C_associated_SNPs_42168 0 0 1 GRWD1 POSTAR2 ENCODE chr17:66033473-66033537
64251 chr2 44021752 44021752 1 + G T UCEC 44021747 + 44021727 44021767 41 AAGCAGTTTCTGAAATGAGACAGAAGATCTGGAATAATATG AAGCAGTTTCTGAAATGAGACAGAATATCTGGAATAATATG < 41bp 1 0.759312982253297 1 0.230525970458984 experiment 0.481374035493406 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DYNC2LI1 ENSG00000138036 CDS Human protein_coding chr2:44021747 chr2:44021752 nonsynonymous SNV 0.980 1 26 hm5C_associated_SNPs_42169 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:44021740-44021754
64251 chr6 26093184 26093184 1 + C T UCEC 26093171 + 26093151 26093191 41 GCACCCAGGCCTGGATCAGCCCCTCATTGTGATCTGGGGTA GCACCCAGGCCTGGATCAGCCCCTCATTGTGATTTGGGGTA < 41bp 1 0.17867953780413 1 0.0446358621120453 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control HFE ENSG00000010704 CDS Human protein_coding chr6:26093171 chr6:26093184 synonymous SNV . 0 34 hm5C_associated_SNPs_42170 0 0 1 SND1 POSTAR2 ENCODE chr6:26093037-26093187
64251 chr6 27833357 27833357 1 + G A UCEC 27833344 + 27833324 27833364 41 GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCC GGAGCTGGCGGGCAACGCCGCCCGCGACAACAAAAAGACCC < 41bp 1 0.353983366412861 1 0.429449498653412 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833344 chr6:27833357 synonymous SNV . 0 34 hm5C_associated_SNPs_42171 0 0 1 YBX3 POSTAR2 ENCODE chr6:27833357-27833407
64251 chr6 27833357 27833357 1 + G A UCEC 27833345 + 27833325 27833365 41 GAGCTGGCGGGCAACGCCGCCCGCGACAACAAGAAGACCCG GAGCTGGCGGGCAACGCCGCCCGCGACAACAAAAAGACCCG < 41bp 1 0.407609471332817 1 0.372019678354263 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AL ENSG00000198374 CDS Human other chr6:27833345 chr6:27833357 synonymous SNV . 0 33 hm5C_associated_SNPs_42172 0 0 1 YBX3 POSTAR2 ENCODE chr6:27833357-27833407
64251 chr3 184038422 184038422 1 + G A UCEC 184038413 + 184038393 184038433 41 TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGAGATC TCATCTTATAGCTTTCTTTCCCCAGATCCAAATTCGAGATC < 41bp 1 0.141098410122499 1 0.19976469874382 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184038413 chr3:184038422 nonsynonymous SNV 1.000 4 30 hm5C_associated_SNPs_42173 0 0 17 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:184038416-184038432
64251 chr9 125143655 125143655 1 + A G UCEC 125143665 + 125143645 125143685 41 ACCAGGGAAGAAGCAGTTGCCAGATGCCCAGCTCCTGGCCC ACCAGGGAAGGAGCAGTTGCCAGATGCCCAGCTCCTGGCCC < 41bp 1 0.698902750282861 1 0.959330201148987 experiment 0.602194499434277 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout PTGS1 ENSG00000095303 CDS Human protein_coding chr9:125143665 chr9:125143655 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_42174 0 0 1 SF3B4 POSTAR2 ENCODE chr9:125143597-125143668
64251 chr4 154318410 154318410 1 + C T UCEC 154318425 + 154318405 154318445 41 CACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA CACTTTGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGAA < 41bp 1 0.2772314437683 1 0.400718569755554 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MND1 ENSG00000121211 CDS Human protein_coding chr4:154318425 chr4:154318410 stopgain 0.891 0 6 hm5C_associated_SNPs_42175 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:154318392-154318416
64251 chrX 102841783 102841783 1 + G T UCEC 102841797 + 102841777 102841817 41 GTTAAAGGATAAAGGAAAGCCAGAGAGTGAGGGAGAGGCAA GTTAAATGATAAAGGAAAGCCAGAGAGTGAGGGAGAGGCAA < 41bp 1 0.778118456825405 1 0.789438843727112 experiment 0.44376308634919 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841797 chrX:102841783 nonsynonymous SNV 0.011 0 7 hm5C_associated_SNPs_42176 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:102841750-102841786
64251 chr17 40931084 40931084 1 + C A UCEC 40931095 + 40931075 40931115 41 CAAGTTCTTCTAGCAGGGACCTGTCTCCCTTTACTTCTTAC CAAGTTCTTATAGCAGGGACCTGTCTCCCTTTACTTCTTAC < 41bp 1 0.154938607373665 1 0.0720909535884857 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control VPS25 ENSG00000131475 CDS Human protein_coding chr17:40931095 chr17:40931084 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_42178 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:40931059-40931110
64251 chrX 123229252 123229252 1 + G T UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGACGAGAGAGAACATAACTGAAGCCTGATTTCT < 41bp 1 0.200344957210896 1 0.17824187874794 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229252 stopgain 1.000 1 23 hm5C_associated_SNPs_42179 0 0 15 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chrX 16753426 16753426 1 + G T UCEC 16753431 + 16753411 16753451 41 AGCACAAACAATAAAGAAATCCGTAGAAGAAGGAAAAATAG AGCACAAACAATAAATAAATCCGTAGAAGAAGGAAAAATAG < 41bp 1 0.388191961773353 1 0.250655353069305 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16753431 chrX:16753426 nonsynonymous SNV 0.978 3 16 hm5C_associated_SNPs_42182 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16753368-16753442
64251 chr14 102482328 102482328 1 + T A UCEC 102482327 + 102482307 102482347 41 CGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTG CGCTGCCTGGGCTCGCTCTTCACCATGCTGCACCAGGCCTG < 41bp 1 0.712511080056707 1 0.690110206604004 experiment 0.574977839886587 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102482327 chr14:102482328 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_42184 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102482297-102482350
64251 chr2 114713249 114713249 1 + C A UCEC 114713267 + 114713247 114713287 41 TGCAGTTTGGTTTGGAGGATCAATGCTGGCTTCCACGGTGA TGAAGTTTGGTTTGGAGGATCAATGCTGGCTTCCACGGTGA < 41bp 1 0.352630327587728 1 0.138211518526077 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114713267 chr2:114713249 nonsynonymous SNV 0.991 5 3 hm5C_associated_SNPs_42185 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:114713225-114713261
64251 chr15 101169714 101169714 1 + G A UCEC 101169701 + 101169681 101169721 41 CTCTTCACTATGCAGCCATGCATGGCCGGGCCCGCATTGCA CTCTTCACTATGCAGCCATGCATGGCCGGGCCCACATTGCA < 41bp 1 0.357378956569669 1 0.0405502617359161 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169701 chr15:101169714 nonsynonymous SNV 0.997 2 34 hm5C_associated_SNPs_42188 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:101169702-101169736
64251 chr10 89505610 89505610 1 + C A UCEC 89505590 + 89505570 89505610 41 TGTTGCCACCCTGTAACAGGCACAATGAGTTTGACTTCATC TGTTGCCACCCTGTAACAGGCACAATGAGTTTGACTTCATA < 41bp 1 0.535694180553229 1 0.106844276189804 experiment 0.928611638893542 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89505590 chr10:89505610 synonymous SNV . 0 41 hm5C_associated_SNPs_42189 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:89505609-89505610
64251 chr3 138341067 138341067 1 + G T UCEC 138341068 + 138341048 138341088 41 TGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGG TGGATGTTCAAATTAGTGGTCAAAGAAACATTCTATGTTGG < 41bp 1 0.186174186943194 1 0.573011636734009 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138341068 chr3:138341067 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_42192 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr3:138341038-138341081
64251 chr8 132968060 132968060 1 + G T UCEC 132968077 + 132968057 132968097 41 AGAGAATCCTGCTGTGCTGGCTGAAAACTGTTTCAGAGAAC AGATAATCCTGCTGTGCTGGCTGAAAACTGTTTCAGAGAAC < 41bp 1 0.731587325496509 1 0.530483365058899 experiment 0.536825349006982 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFR3A ENSG00000132294 CDS Human protein_coding chr8:132968077 chr8:132968060 nonsynonymous SNV 0.998 1 4 hm5C_associated_SNPs_42193 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:132968048-132968084
64251 chrX 100880810 100880810 1 + C T UCEC 100880794 + 100880774 100880814 41 AATTTGGCTGAAAATCCAGCCATGACTAGGGAACTGCTCAG AATTTGGCTGAAAATCCAGCCATGACTAGGGAACTGTTCAG < 41bp 1 0.591408138084091 1 0.167367845773697 experiment 0.817183723831817 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880794 chrX:100880810 nonsynonymous SNV 0.994 1 37 hm5C_associated_SNPs_42196 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:100880787-100880818
64251 chr11 129996715 129996715 1 + G A UCEC 129996707 + 129996687 129996727 41 GAGCAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGT GAGCAGCTGGAGATTCGGCACCGCAACCAAATGGACAGGGT < 41bp 1 0.438861796490428 1 0.10922509431839 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996707 chr11:129996715 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_42197 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr11 129996715 129996715 1 + G A UCEC 129996710 + 129996690 129996730 41 CAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGTAAA CAGCTGGAGATTCGGCACCGCAACCAAATGGACAGGGTAAA < 41bp 1 0.12571134429898 1 0.077593058347702 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996710 chr11:129996715 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_42198 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr5 139876768 139876768 1 + G A UCEC 139876749 + 139876729 139876769 41 ATCAGCAGATTGTAGGACAGCCTCAGATTGCTATTACTGGA ATCAGCAGATTGTAGGACAGCCTCAGATTGCTATTACTGAA < 41bp 1 0.145995203421771 1 0.0471703112125397 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139876749 chr5:139876768 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_42200 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:139876713-139876820
64251 chr2 204259478 204259478 1 + G T UCEC 204259473 + 204259453 204259493 41 AGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCC AGTGCGTCCTCCAGTGGTACCAAATTATTACGTACCTAGCC < 41bp 1 0.437865452025504 1 0.642450094223022 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ABI2 ENSG00000138443 CDS Human protein_coding chr2:204259473 chr2:204259478 nonsynonymous SNV 1.000 5 26 hm5C_associated_SNPs_42201 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204259454-204259492
64251 chr17 78350182 78350182 1 + G A UCEC 78350171 + 78350151 78350191 41 TCCTGATATCAGCCGTTTTGCAACATCGCTCGTGGACAATT TCCTGATATCAGCCGTTTTGCAACATCGCTCATGGACAATT < 41bp 1 0.19503544261616 1 0.417670696973801 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78350171 chr17:78350182 nonsynonymous SNV 0.010 4 32 hm5C_associated_SNPs_42202 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:78350180-78350218
64251 chr11 33370238 33370238 1 + C A UCEC 33370247 + 33370227 33370267 41 GGACTCTGATTCATCAGTTTCAGACAAACAGCGGCAAACCA GGACTCTGATTAATCAGTTTCAGACAAACAGCGGCAAACCA < 41bp 1 0.219082339197383 1 0.497317790985107 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33370247 chr11:33370238 stopgain 0.988 0 12 hm5C_associated_SNPs_42206 0 0 2 YBX3 POSTAR2 ENCODE chr11:33370232-33370311
64251 chr17 38610244 38610244 1 + G A UCEC 38610248 + 38610228 38610268 41 GCCGCTTCACAGAGCCGCACCCACGAGGACCTCTACATCAT GCCGCTTCACAGAGCCACACCCACGAGGACCTCTACATCAT < 41bp 1 0.361797372876791 1 0.114600241184235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610248 chr17:38610244 nonsynonymous SNV 0.990 4 17 hm5C_associated_SNPs_42207 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38610240-38610260
64251 chr11 35250853 35250853 1 + G T UCEC 35250851 + 35250831 35250871 41 CTGATGAGACAAGGAACCTGCAGAATGTGGACATGAAGATT CTGATGAGACAAGGAACCTGCATAATGTGGACATGAAGATT < 41bp 1 0.306641980941521 1 0.102656066417694 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35250851 chr11:35250853 nonsynonymous SNV 0.986 3 23 hm5C_associated_SNPs_42209 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:35250816-35250854
64251 chr4 107268711 107268711 1 + G T UCEC 107268727 + 107268707 107268747 41 CTAAGAAGAAGATTTGGGAGCAGATCCAGCCTGATCTTCAC CTAATAAGAAGATTTGGGAGCAGATCCAGCCTGATCTTCAC < 41bp 1 0.373366522526251 1 0.284045219421387 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107268727 chr4:107268711 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_42211 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:107268689-107268740
64251 chr7 128119308 128119308 1 + T G UCEC 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATGCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.13668825857769 1 0.133847266435623 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119308 nonsynonymous SNV 0.992 4 6 hm5C_associated_SNPs_42213 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr10 75830567 75830567 1 + G A UCEC 75830552 + 75830532 75830572 41 TCCTCTCTGGAACATCAGACCTGCTCCTTACCTTCGATGAG TCCTCTCTGGAACATCAGACCTGCTCCTTACCTTCAATGAG < 41bp 1 0.308678943994952 1 0.0504015982151031 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75830552 chr10:75830567 nonsynonymous SNV 0.998 4 36 hm5C_associated_SNPs_42221 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75830541-75830567
64251 chrX 17770030 17770030 1 + C A UCEC 17770024 + 17770004 17770044 41 GGTCGGTGGAAGCAGTGGTCCTATTTCTAAAACAAACAGAT GGTCGGTGGAAGCAGTGGTCCTATTTATAAAACAAACAGAT < 41bp 1 0.328913412272107 1 0.329290628433228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCML1 ENSG00000047634 CDS Human protein_coding chrX:17770024 chrX:17770030 nonsynonymous SNV 0.011 2 27 hm5C_associated_SNPs_42225 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:17769962-17770074
64251 chrX 135593865 135593865 1 + A C UCEC 135593870 + 135593850 135593890 41 AATATGCAGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAG AATATGCAGATGAAACGGGGCTTGAAGCTGCTGATAAAAAG < 41bp 1 0.322185687141826 1 0.183488577604294 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593870 chrX:135593865 nonsynonymous SNV 0.536 1 16 hm5C_associated_SNPs_42227 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chrX 135593865 135593865 1 + A C UCEC 135593877 + 135593857 135593897 41 AGATGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAG AGATGAAACGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAG < 41bp 1 0.729460966949922 1 0.329048484563828 experiment 0.541078066100156 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593877 chrX:135593865 nonsynonymous SNV 0.536 1 9 hm5C_associated_SNPs_42228 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chrX 135593865 135593865 1 + A C UCEC 135593880 + 135593860 135593900 41 TGAAAAGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAG TGAAACGGGGCTTGAAGCTGCTGATAAAAAGGCGGAAGAAG < 41bp 1 0.261565843713875 1 0.208027124404907 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593880 chrX:135593865 nonsynonymous SNV 0.536 1 6 hm5C_associated_SNPs_42229 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593807-135594104
64251 chr17 30535220 30535220 1 + A C UCEC 30535224 + 30535204 30535244 41 AGTATTTCACCTACTGATTTCTGCAGGAAACACAAAATGCC AGTATTTCACCTACTGCTTTCTGCAGGAAACACAAAATGCC < 41bp 1 0.735944880652631 1 0.81133645772934 experiment 0.528110238694739 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30535224 chr17:30535220 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_42230 0 0 3 FASTKD2 POSTAR2 ENCODE chr17:30535214-30535315
64251 chr19 39860392 39860392 1 + G A UCEC 39860373 + 39860353 39860393 41 CCACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAGT CCACCTTCCCCTGCTTCAGCCAGGCAACACAGAGGCCAAAT < 41bp 1 0.48898794764508 1 0.678594589233398 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860373 chr19:39860392 synonymous SNV . 0 40 hm5C_associated_SNPs_42232 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39860351-39860415
64251 chr19 39860392 39860392 1 + G A UCEC 39860388 + 39860368 39860408 41 TCAGCCAGGCAACACAGAGGCCAAGTCGGAGTACATGAGGC TCAGCCAGGCAACACAGAGGCCAAATCGGAGTACATGAGGC < 41bp 1 0.249183909071917 1 0.249624788761139 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860388 chr19:39860392 synonymous SNV . 0 25 hm5C_associated_SNPs_42233 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39860351-39860415
64251 chr8 73921219 73921219 1 + G T UCEC 73921233 + 73921213 73921253 41 CAGAGAGAAACGACGAGGAGCAGTTCGAATGCCAGGAACTG CAGAGATAAACGACGAGGAGCAGTTCGAATGCCAGGAACTG < 41bp 1 0.242887457641813 1 0.0787836611270905 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921233 chr8:73921219 nonsynonymous SNV 0.002 1 7 hm5C_associated_SNPs_42234 0 0 1 GRWD1 POSTAR2 ENCODE chr8:73921133-73921305
64251 chr6 44116553 44116553 1 + C A UCEC 44116536 + 44116516 44116556 41 CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTCATC CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTAATC < 41bp 1 0.0942493911556688 1 0.724096298217773 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116536 chr6:44116553 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_42235 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:44116553-44116554
64251 chrX 73042378 73042378 1 - C A UCEC 73042369 - 73042349 73042389 41 AGAATATAGGAGAAAGGTTACTGTTTATTTTTTTTCATGTA AGAATATAGGATAAAGGTTACTGTTTATTTTTTTTCATGTA < 41bp 1 0.0453259032056208 1 0.0718485713005066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042369 chrX:73042378 . . 0 12 hm5C_associated_SNPs_42236 0 0 61 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73040480-73042460
64251 chr2 228398426 228398426 1 + A T UCEC 228398425 + 228398405 228398445 41 GCTGGTTTACAGACTGCAGACAAATATGCAGCACTTGCTAA GCTGGTTTACAGACTGCAGACTAATATGCAGCACTTGCTAA < 41bp 1 0.447199311774735 1 0.0620908141136169 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228398425 chr2:228398426 stopgain 1.000 1 22 hm5C_associated_SNPs_42238 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:228398333-228398448
64251 chr5 72189471 72189471 1 + C A UCEC 72189491 + 72189471 72189511 41 CTTTTGCCCTGTTAGGTGACCTCACAAAAGCTTGCTTTCAG ATTTTGCCCTGTTAGGTGACCTCACAAAAGCTTGCTTTCAG < 41bp 1 0.242719616074593 1 0.111446708440781 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72189491 chr5:72189471 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_42250 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:72189453-72189484
64251 chr9 2186185 2186185 1 + T C UCEC 2186182 + 2186162 2186202 41 GAAGAGAGTGAGGATGAAAGCAATGAAGAGGAGGAAGAGGA GAAGAGAGTGAGGATGAAAGCAACGAAGAGGAGGAAGAGGA < 41bp 1 0.554044616600447 1 0.387548714876175 experiment 0.891910766799105 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186182 chr9:2186185 synonymous SNV . 0 24 hm5C_associated_SNPs_42251 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:2186184-2186185
64251 chr2 192141642 192141642 1 + A C UCEC 192141649 + 192141629 192141669 41 AAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGA AAATGGAGGTGAACACCTCACTTCTGGACAATATGATTGGA < 41bp 1 0.243276958170409 1 0.216290175914764 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141649 chr2:192141642 nonsynonymous SNV 0.969 2 14 hm5C_associated_SNPs_42254 0 0 1 GRWD1 POSTAR2 ENCODE chr2:192141642-192141755
64251 chr19 34717316 34717316 1 + A G UCEC 34717318 + 34717298 34717338 41 TTTTTTACCTTTCAGAAAACCACAGCTTTTGGACCCTAAAA TTTTTTACCTTTCAGAAAGCCACAGCTTTTGGACCCTAAAA < 41bp 1 0.190499533387477 1 0.305062413215637 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSM14A ENSG00000257103 CDS Human protein_coding chr19:34717318 chr19:34717316 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_42255 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34717296-34717322
64251 chr11 65267165 65267165 1 + G T UCEC 65267145 + 65267125 65267165 41 TGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAG TGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAT < 41bp 1 0.644361233487318 1 0.827397048473358 experiment 0.711277533025365 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267145 chr11:65267165 . . 0 41 hm5C_associated_SNPs_42256 0 0 70 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr11:65266520-65267320
64251 chr11 65267165 65267165 1 + G T UCEC 65267153 + 65267133 65267173 41 AAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAAT AAAACTGGAAGACAGAAGTACGGGAAGGCGAATAAAAGAAT < 41bp 1 0.71606162036953 1 0.717091262340546 experiment 0.56787675926094 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65267153 chr11:65267165 . . 0 33 hm5C_associated_SNPs_42257 0 0 70 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr11:65266520-65267320
64251 chr5 177633861 177633861 1 + G T UCEC 177633841 + 177633821 177633861 41 TCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAG TCTTCGTTGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAT < 41bp 1 0.577811465635747 1 0.274541735649109 experiment 0.844377068728505 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633841 chr5:177633861 nonsynonymous SNV 1.000 3 41 hm5C_associated_SNPs_42258 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:177633808-177633861
64251 chr5 177633861 177633861 1 + G T UCEC 177633848 + 177633828 177633868 41 TGGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGG TGGGGGTCTGAATCCTGAAGCCACTGAGGAAAATATCAGGG < 41bp 1 0.135185074519531 1 0.348401814699173 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633848 chr5:177633861 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_42259 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:177633808-177633861
64251 chr5 177633861 177633861 1 + G T UCEC 177633849 + 177633829 177633869 41 GGGGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGA GGGGGTCTGAATCCTGAAGCCACTGAGGAAAATATCAGGGA < 41bp 1 0.441065174919391 1 0.370948761701584 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633849 chr5:177633861 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_42260 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:177633808-177633861
64251 chr5 177633861 177633861 1 + G T UCEC 177633851 + 177633831 177633871 41 GGGTCTGAATCCTGAAGCCACTGAGGAAAAGATCAGGGAGT GGGTCTGAATCCTGAAGCCACTGAGGAAAATATCAGGGAGT < 41bp 1 0.467276404710354 1 0.375456094741821 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPAB ENSG00000197451 CDS Human protein_coding chr5:177633851 chr5:177633861 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_42261 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:177633808-177633861
64251 chr10 43316410 43316410 1 + C A UCEC 43316391 + 43316371 43316411 41 TTTCCTTTAAGGCCCTATCACTCCACAGGGAACTGGTTTCT TTTCCTTTAAGGCCCTATCACTCCACAGGGAACTGGTTTAT < 41bp 1 0.729011103039663 1 0.98382043838501 experiment 0.541977793920675 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43316391 chr10:43316410 nonsynonymous SNV 0.997 3 40 hm5C_associated_SNPs_42262 0 0 6 BUD13 POSTAR2 ENCODE chr10:43316375-43316414
64251 chr20 21362684 21362684 1 + A C UCEC 21362679 + 21362659 21362699 41 GTCCTCCTCCCCTTTTCCAGCAGCAAAGGTTTGACAGGTAA GTCCTCCTCCCCTTTTCCAGCAGCACAGGTTTGACAGGTAA < 41bp 1 0.551050166423136 1 0.297279715538025 experiment 0.897899667153728 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRN2 ENSG00000088930 CDS Human protein_coding chr20:21362679 chr20:21362684 nonsynonymous SNV 0.999 0 26 hm5C_associated_SNPs_42263 0 0 1 DDX6 POSTAR2 ENCODE chr20:21362681-21362696
64251 chrX 123229267 123229267 1 + T G UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATGTCT < 41bp 1 0.502571560694292 1 0.532979965209961 experiment 0.994856878611416 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229267 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_42264 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:123229226-123229268
64251 chr5 154251380 154251380 1 + C G UCEC 154251388 + 154251368 154251408 41 TCTGAACCTTTTCTTCCCATCCATTTATGATGTGAAATACC TCTGAACCTTTTGTTCCCATCCATTTATGATGTGAAATACC < 41bp 1 0.0523058154107125 1 0.12595322728157 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT8 ENSG00000155508 CDS Human protein_coding chr5:154251388 chr5:154251380 nonsynonymous SNV 0.998 1 13 hm5C_associated_SNPs_42265 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:154251360-154251380
64251 chr17 41348562 41348562 1 + G A UCEC 41348551 + 41348531 41348571 41 ACAGTCCTTTAATAGAGAAGCCAGGCTTGGGGCAGATAGAG ACAGTCCTTTAATAGAGAAGCCAGGCTTGGGACAGATAGAG < 41bp 1 0.304497320408322 1 0.177854955196381 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348551 chr17:41348562 synonymous SNV . 0 32 hm5C_associated_SNPs_42266 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:41348543-41348573
64251 chr17 41348562 41348562 1 + G A UCEC 41348556 + 41348536 41348576 41 CCTTTAATAGAGAAGCCAGGCTTGGGGCAGATAGAGGAAGA CCTTTAATAGAGAAGCCAGGCTTGGGACAGATAGAGGAAGA < 41bp 1 0.55258282167663 1 0.0913607478141785 experiment 0.89483435664674 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348556 chr17:41348562 synonymous SNV . 0 27 hm5C_associated_SNPs_42267 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:41348543-41348573
64251 chr17 41348562 41348562 1 + G A UCEC 41348563 + 41348543 41348583 41 TAGAGAAGCCAGGCTTGGGGCAGATAGAGGAAGAGAATGAA TAGAGAAGCCAGGCTTGGGACAGATAGAGGAAGAGAATGAA < 41bp 1 0.339159509056044 1 0.273230373859406 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41348563 chr17:41348562 synonymous SNV . 0 20 hm5C_associated_SNPs_42268 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:41348543-41348573
64251 chr14 62205000 62205000 1 + C A UCEC 62204993 + 62204973 62205013 41 AAGTTGCATTAAAATTAGAACCAAATCCAGAGTCACTGGAA AAGTTGCATTAAAATTAGAACCAAATCAAGAGTCACTGGAA < 41bp 1 0.239875470553044 1 0.249249249696732 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HIF1A ENSG00000100644 CDS Human protein_coding chr14:62204993 chr14:62205000 nonsynonymous SNV 1.000 0 28 hm5C_associated_SNPs_42269 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:62204969-62205011
64251 chr16 31196313 31196313 1 + G A UCEC 31196312 + 31196292 31196332 41 AGTGGTGGTGGCAGTGGTGGCGGTTATGGCAATCAAGACCA AGTGGTGGTGGCAGTGGTGGCAGTTATGGCAATCAAGACCA < 41bp 1 0.54985592679863 1 0.439034640789032 experiment 0.900288146402739 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control FUS ENSG00000089280 CDS Human protein_coding chr16:31196312 chr16:31196313 nonsynonymous SNV 0.920 3 22 hm5C_associated_SNPs_42270 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31196296-31196319
64251 chr11 129996720 129996720 1 + G A UCEC 129996707 + 129996687 129996727 41 GAGCAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGT GAGCAGCTGGAGATTCGGCACCGCAACCGAATGAACAGGGT < 41bp 1 0.417227240365468 1 0.168643444776535 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996707 chr11:129996720 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_42271 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr11 129996720 129996720 1 + G A UCEC 129996710 + 129996690 129996730 41 CAGCTGGAGATTCGGCACCGCAACCGAATGGACAGGGTAAA CAGCTGGAGATTCGGCACCGCAACCGAATGAACAGGGTAAA < 41bp 1 0.176324481891467 1 0.109046846628189 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:129996710 chr11:129996720 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_42272 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr11:129996683-129996722
64251 chr1 161748036 161748036 1 + T C UCEC 161748056 + 161748036 161748076 41 TCTGCTCTCTTTGCTGAACTCGGTTATTTCACAGACACTGA CCTGCTCTCTTTGCTGAACTCGGTTATTTCACAGACACTGA < 41bp 1 0.313871535762188 1 0.204070746898651 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161748056 chr1:161748036 nonsynonymous SNV 0.863 3 1 hm5C_associated_SNPs_42279 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161748032-161748072
64251 chr11 308255 308255 1 + G A UCEC 308239 + 308219 308259 41 TCCTGTCAACAGCGGCCAGCCTCCCAACTACGAGATGCTCA TCCTGTCAACAGCGGCCAGCCTCCCAACTACGAGATACTCA < 41bp 1 0.330527086029503 1 0.283999353647232 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IFITM2 ENSG00000185201 CDS Human protein_coding chr11:308239 chr11:308255 nonsynonymous SNV 0.003 1 37 hm5C_associated_SNPs_42281 0 0 7 LIN28A POSTAR2 GSE39873,GSM980594 chr11:308240-308260
64251 chr6 161470203 161470203 1 + C A UCEC 161470199 + 161470179 161470219 41 CAGATATTATTAATGAAATCCTTACTTTCAAAGTCGACTAT CAGATATTATTAATGAAATCCTTAATTTCAAAGTCGACTAT < 41bp 1 0.223251024962476 1 0.156533241271973 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470199 chr6:161470203 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_42282 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:161470193-161470220
64251 chr5 149206256 149206256 1 + C T UCEC 149206241 + 149206221 149206261 41 CCCTCCTCACTCCAGATTGACAGTGAGAATGAGGCCCTCCT CCCTCCTCACTCCAGATTGACAGTGAGAATGAGGCTCTCCT < 41bp 1 0.194060863045016 1 0.0375402271747589 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149206241 chr5:149206256 synonymous SNV . 0 36 hm5C_associated_SNPs_42283 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149206245-149206269
64251 chrX 64956684 64956684 1 + G A UCEC 64956664 + 64956644 64956684 41 TCTCCTTCCCTAGTGCTATGCTGGAAAATGAGAAGAAGAAG TCTCCTTCCCTAGTGCTATGCTGGAAAATGAGAAGAAGAAA < 41bp 1 0.675573342862956 1 0.668651461601257 experiment 0.648853314274088 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956664 chrX:64956684 synonymous SNV . 0 41 hm5C_associated_SNPs_42284 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956684 64956684 1 + G A UCEC 64956685 + 64956665 64956705 41 TGGAAAATGAGAAGAAGAAGCGTGAAATGGCAGAGAAGGAG TGGAAAATGAGAAGAAGAAACGTGAAATGGCAGAGAAGGAG < 41bp 1 0.590231050225396 1 0.491238653659821 experiment 0.819537899549208 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956685 chrX:64956684 synonymous SNV . 0 20 hm5C_associated_SNPs_42285 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chrX 64956684 64956684 1 + G A UCEC 64956695 + 64956675 64956715 41 GAAGAAGAAGCGTGAAATGGCAGAGAAGGAGAAAGAGAAGA GAAGAAGAAACGTGAAATGGCAGAGAAGGAGAAAGAGAAGA < 41bp 1 0.475967106842268 1 0.380179107189178 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956695 chrX:64956684 synonymous SNV . 0 10 hm5C_associated_SNPs_42286 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64956670-64956709
64251 chr15 78841254 78841254 1 + A G UCEC 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCGTGAGAAGGAAGAAAAAGAA < 41bp 1 0.667797231305837 1 0.4283167719841 experiment 0.664405537388325 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841254 nonsynonymous SNV 0.998 1 30 hm5C_associated_SNPs_42287 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr9 79996923 79996923 1 + C T UCEC 79996920 + 79996900 79996940 41 AGACTTCTGAAGTGGAGAGTCTGCGACCTCCTCGGTTCTTC AGACTTCTGAAGTGGAGAGTCTGTGACCTCCTCGGTTCTTC < 41bp 1 0.257815881603681 1 0.37711375951767 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control VPS13A ENSG00000197969 CDS Human protein_coding chr9:79996920 chr9:79996923 stopgain 0.980 1 24 hm5C_associated_SNPs_42288 0 0 2 EIF3H POSTAR2 ENCODE chr9:79996893-79996995
64251 chr6 18213974 18213974 1 + C T UCEC 18213957 + 18213937 18213977 41 TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGTGAG < 41bp 1 0.413399859580966 1 0.247388541698456 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213957 chr6:18213974 stopgain 0.958 0 38 hm5C_associated_SNPs_42289 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr6 18213974 18213974 1 + C T UCEC 18213959 + 18213939 18213979 41 ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGTGAGGG < 41bp 1 0.434244310918233 1 0.515890896320343 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213959 chr6:18213974 stopgain 0.958 0 36 hm5C_associated_SNPs_42290 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr19 18975039 18975039 1 + G A UCEC 18975023 + 18975003 18975043 41 ATGTATGATGCCCGGGAGGCCATCATCCCAGGCTCCGTCTA ATGTATGATGCCCGGGAGGCCATCATCCCAGGCTCCATCTA < 41bp 1 0.477849467455284 1 0.0728333592414856 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18975023 chr19:18975039 nonsynonymous SNV 0.878 2 37 hm5C_associated_SNPs_42292 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:18975038-18975082
64251 chr21 30411818 30411818 1 + G T UCEC 30411804 + 30411784 30411824 41 CTTTTTGTTTTTCTCTAGAGCAGTGCGGTTTAAAGGCTATC CTTTTTGTTTTTCTCTAGAGCAGTGCGGTTTAAATGCTATC < 41bp 1 0.268907452531764 1 0.148191779851913 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30411804 chr21:30411818 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_42293 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:30411804-30411824
64251 chr2 114688909 114688909 1 + G T UCEC 114688918 + 114688898 114688938 41 TCCAGAAAACAGGGAATATACTGCTGAAATAATGTTTGAGT TCCAGAAAACATGGAATATACTGCTGAAATAATGTTTGAGT < 41bp 1 0.650058020560099 1 0.107877045869827 experiment 0.699883958879803 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114688918 chr2:114688909 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_42294 0 0 3 PRPF8 POSTAR2 ENCODE chr2:114688888-114688997
64251 chr17 41345509 41345509 1 + C T UCEC 41345492 + 41345472 41345512 41 TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGCGTC TGCCCCAGCCTTGGAGGGAACGTATACTTCCCATTGGTGTC < 41bp 1 0.217913009273439 1 0.114759981632233 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345492 chr17:41345509 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_42295 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41345493-41345517
64251 chrX 73046580 73046580 1 - G A UCEC 73046568 - 73046548 73046588 41 GACCCAAGCGAAAAAGGTATCTCAAGACTAACGGCCGGAAT GACCCAAGTGAAAAAGGTATCTCAAGACTAACGGCCGGAAT < 41bp 1 0.697091320102448 1 0.331723749637604 experiment 0.605817359795104 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046568 chrX:73046580 . . 0 9 hm5C_associated_SNPs_42296 0 0 80 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046580 73046580 1 - G A UCEC 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGATAGAGGACCCAAGTGAAAAAGGTATCTCA < 41bp 1 0.109097435776503 1 0.259132981300354 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046580 . . 0 26 hm5C_associated_SNPs_42297 0 0 80 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr13 115091203 115091203 1 + C G UCEC 115091186 + 115091166 115091206 41 AAGAAGCTCAAGAAAGACAACCAAGAGAGCTCAGACGCTGA AAGAAGCTCAAGAAAGACAACCAAGAGAGCTCAGACGGTGA < 41bp 1 0.130201317015194 1 0.358097076416016 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115091186 chr13:115091203 nonsynonymous SNV 0.998 1 38 hm5C_associated_SNPs_42298 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr13:115091200-115091220
64251 chr7 44741197 44741197 1 + T G UCEC 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCGCCACCCCGAGGCCAGATCCAGCTGTGATGAGATGCTTC < 41bp 1 0.185182610320938 1 0.455376803874969 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741197 nonsynonymous SNV 0.999 2 27 hm5C_associated_SNPs_42299 0 0 1 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr20 37580974 37580974 1 + A G UCEC 37580957 + 37580937 37580977 41 TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCACTT TGGGCACCCCCCACCTGGAACTGTACTTGAGTGACTCGCTT < 41bp 1 0.32970824864089 1 0.107550859451294 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580957 chr20:37580974 synonymous SNV . 0 38 hm5C_associated_SNPs_42300 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr12 1517357 1517357 1 + G A UCEC 1517370 + 1517350 1517390 41 CGAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAA CGAGGATAACCACTTCAAATCCTCCCATTCCAATCAAACAA < 41bp 1 0.0243435127300527 1 0.101734936237335 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ERC1 ENSG00000082805 CDS Human protein_coding chr12:1517370 chr12:1517357 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_42301 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:1517339-1517386
64251 chr7 2419058 2419058 1 + G A UCEC 2419038 + 2419018 2419058 41 TGTCCCCTCAGGGGTGGACACTGACGAGCTGGACAGCAACG TGTCCCCTCAGGGGTGGACACTGACGAGCTGGACAGCAACA < 41bp 1 0.444024365945681 1 0.0538598895072937 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419038 chr7:2419058 nonsynonymous SNV 0.996 3 41 hm5C_associated_SNPs_42302 0 0 22 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:2419020-2419060
64251 chr7 2419058 2419058 1 + G A UCEC 2419051 + 2419031 2419071 41 GTGGACACTGACGAGCTGGACAGCAACGTGGACGACTGGGA GTGGACACTGACGAGCTGGACAGCAACATGGACGACTGGGA < 41bp 1 0.701294548143927 1 0.248336851596832 experiment 0.597410903712147 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419051 chr7:2419058 nonsynonymous SNV 0.996 3 28 hm5C_associated_SNPs_42303 0 0 22 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:2419020-2419060
64251 chr2 233674449 233674449 1 + G A UCEC 233674436 + 233674416 233674456 41 CACTTCATTCCTAGGGAGAGCTGGACCAGGAACGACTGACC CACTTCATTCCTAGGGAGAGCTGGACCAGGAACAACTGACC < 41bp 1 0.503607594642972 1 0.589686989784241 experiment 0.992784810714057 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233674436 chr2:233674449 nonsynonymous SNV 1.000 3 34 hm5C_associated_SNPs_42304 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:233674421-233674490
64251 chr2 233674449 233674449 1 + G A UCEC 233674441 + 233674421 233674461 41 CATTCCTAGGGAGAGCTGGACCAGGAACGACTGACCAGGCA CATTCCTAGGGAGAGCTGGACCAGGAACAACTGACCAGGCA < 41bp 1 0.248580487618402 1 0.306059718132019 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233674441 chr2:233674449 nonsynonymous SNV 1.000 3 29 hm5C_associated_SNPs_42305 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:233674421-233674490
64251 chr17 4923887 4923887 1 + G A UCEC 4923870 + 4923850 4923890 41 TGGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACCGCCC TGGAACGGGAACGAGGGGTCCCCCCACCCCCAGGACCACCC < 41bp 1 0.129605444230268 1 0.0812363028526306 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4923870 chr17:4923887 synonymous SNV . 0 38 hm5C_associated_SNPs_42307 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr17:4923880-4923900
64251 chr17 15929903 15929903 1 + G A UCEC 15929902 + 15929882 15929922 41 CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCCTATATT CTACCCTGGATGCACAGGGCCACTTTGATGAGGCCTATATT < 41bp 1 0.139737762823942 1 0.0243609249591827 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929902 chr17:15929903 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_42309 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr17:15929878-15929905
64251 chr12 109637345 109637345 1 + C T UCEC 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCACGTTGAGGCTGGGAGCAGCTATGCTGAGATGGAGGT < 41bp 1 0.288025255708515 1 0.575288116931915 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637345 synonymous SNV . 0 27 hm5C_associated_SNPs_42310 0 0 2 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr15 66777502 66777502 1 + C T UCEC 66777521 + 66777501 66777541 41 GCCAAGGACCCCCGGGAGGCCCCTTAGCTGTGAGTAGCCTG GTCAAGGACCCCCGGGAGGCCCCTTAGCTGTGAGTAGCCTG < 41bp 1 0.151963513627113 1 0.114430218935013 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAP2K1 ENSG00000169032 CDS Human protein_coding chr15:66777521 chr15:66777502 nonsynonymous SNV 0.979 1 2 hm5C_associated_SNPs_42311 0 0 2 PRPF8 POSTAR2 ENCODE chr15:66777495-66777573
64251 chr10 75529149 75529149 1 + C T UCEC 75529135 + 75529115 75529155 41 TTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCAT TTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGTATCCAT < 41bp 1 0.504712534394928 1 0.0882059037685394 experiment 0.990574931210143 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529135 chr10:75529149 synonymous SNV . 0 35 hm5C_associated_SNPs_42312 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chr10 75529149 75529149 1 + C T UCEC 75529138 + 75529118 75529158 41 ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAAT ACACCAGCTGTGCAGGGCAGCGTCGGCTCCGTATCCATAAT < 41bp 1 0.455252246171255 1 0.262603431940079 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529138 chr10:75529149 synonymous SNV . 0 32 hm5C_associated_SNPs_42313 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chr10 75529149 75529149 1 + C T UCEC 75529146 + 75529126 75529166 41 TGTGCAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCT TGTGCAGGGCAGCGTCGGCTCCGTATCCATAATCTGGCCCT < 41bp 1 0.574930075181395 1 0.0490468144416809 experiment 0.850139849637209 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529146 chr10:75529149 synonymous SNV . 0 24 hm5C_associated_SNPs_42314 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75529127-75529153
64251 chr1 6692462 6692462 1 + G A UCEC 6692470 + 6692450 6692490 41 GGTCCTCCCTGAGGCGGGGGCCGGAGAGGACAGTCCTGGGA GGTCCTCCCTGAAGCGGGGGCCGGAGAGGACAGTCCTGGGA < 41bp 1 0.663986538610059 1 0.576979100704193 experiment 0.672026922779881 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692470 chr1:6692462 synonymous SNV . 0 13 hm5C_associated_SNPs_42315 0 0 1 SF3B1 POSTAR2 ENCODE chr1:6692444-6692474
64251 chr2 32824931 32824931 1 + C T UCEC 32824918 + 32824898 32824938 41 TCTTGTGAATCTAGAGACAACTGGTGGTCATAGCGTGCGAT TCTTGTGAATCTAGAGACAACTGGTGGTCATAGTGTGCGAT < 41bp 1 0.216585688402764 1 0.379756271839142 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824918 chr2:32824931 synonymous SNV . 0 34 hm5C_associated_SNPs_42316 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr9 131088062 131088062 1 + C T UCEC 131088068 + 131088048 131088088 41 TGCCTTTCAGGGAGCGTCCCCGGATTTCGACATCCACCCTC TGCCTTTCAGGGAGTGTCCCCGGATTTCGACATCCACCCTC < 41bp 1 0.766647200549678 1 0.45905527472496 experiment 0.466705598900644 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COQ4 ENSG00000167113 CDS Human protein_coding chr9:131088068 chr9:131088062 nonsynonymous SNV 0.894 4 15 hm5C_associated_SNPs_42318 0 0 2 BUD13 POSTAR2 ENCODE chr9:131088038-131088167
64251 chr10 75867085 75867085 1 + G A UCEC 75867081 + 75867061 75867101 41 ACCTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTG ACCTCAGGAGCCTGACTTCCCGCCACCTCCACCAGACCTTG < 41bp 1 0.78810013403952 1 0.378969103097916 experiment 0.42379973192096 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867081 chr10:75867085 synonymous SNV . 0 25 hm5C_associated_SNPs_42319 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75867074-75867093
64251 chr5 154173687 154173687 1 + G A UCEC 154173686 + 154173666 154173706 41 TTGACTACCAGTTTGGCTACCGAAAGTTTGATGGTGTGGAG TTGACTACCAGTTTGGCTACCAAAAGTTTGATGGTGTGGAG < 41bp 1 0.541807779890474 1 0.547685742378235 experiment 0.916384440219052 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154173686 chr5:154173687 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_42320 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154173667-154173711
64251 chr9 6990452 6990452 1 + C T UCEC 6990461 + 6990441 6990481 41 CTAAGAGTTGGCGCCATCCACTTAGCAGGCCTCCAGCAAGA CTAAGAGTTGGTGCCATCCACTTAGCAGGCCTCCAGCAAGA < 41bp 1 0.217246389663854 1 0.173576354980469 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KDM4C ENSG00000107077 CDS Human protein_coding chr9:6990461 chr9:6990452 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_42324 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:6990430-6990465
64251 chr7 77256351 77256351 1 + G T UCEC 77256335 + 77256315 77256355 41 AGGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAAC AGGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGTGAAC < 41bp 1 0.086448346088819 1 0.242062032222748 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256335 chr7:77256351 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_42325 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77256326-77256364
64251 chr7 77256351 77256351 1 + G T UCEC 77256336 + 77256316 77256356 41 GGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGGGAACA GGTCCCTCTCCAAGAGGGACCAAAAAGTTTTGATGTGAACA < 41bp 1 0.213951645526242 1 0.471249550580978 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77256336 chr7:77256351 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_42326 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77256326-77256364
64251 chr2 28999809 28999809 1 + C T UCEC 28999796 + 28999776 28999816 41 TGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGCCTATTCT TGTATCAAGTCTCGGGAGATCTTTCTCAGCCAGTCTATTCT < 41bp 1 0.1200287836208 1 0.0815187394618988 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1CB ENSG00000213639 CDS Human protein_coding chr2:28999796 chr2:28999809 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_42327 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:28999773-28999829
64251 chr18 51887079 51887079 1 + G T UCEC 51887099 + 51887079 51887119 41 GATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTT TATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTT < 41bp 1 0.464700455182021 1 0.718392729759216 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C18orf54 ENSG00000166845 CDS Human protein_coding chr18:51887099 chr18:51887079 nonsynonymous SNV 0.206 2 1 hm5C_associated_SNPs_42329 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:51887053-51887079
64251 chr2 74315074 74315074 1 + C T UCEC 74315067 + 74315047 74315087 41 CTCATCCTGGCCTGGGAGGGCATTCCCCGTAGCCTCGGAGA CTCATCCTGGCCTGGGAGGGCATTCCCTGTAGCCTCGGAGA < 41bp 1 0.0234542568599432 1 0.0929228663444519 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74315067 chr2:74315074 nonsynonymous SNV 0.997 3 28 hm5C_associated_SNPs_42330 0 0 2 YBX3 POSTAR2 ENCODE chr2:74315026-74315090
64251 chr1 183072765 183072765 1 + C T UCEC 183072762 + 183072742 183072782 41 ACTTTGACAATAGCCCTGTGCTGCAGGTAAATTCTCACAGG ACTTTGACAATAGCCCTGTGCTGTAGGTAAATTCTCACAGG < 41bp 1 0.538171219489258 1 0.0764662325382233 experiment 0.923657561021484 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183072762 chr1:183072765 stopgain 0.997 1 24 hm5C_associated_SNPs_42331 0 0 2 PRPF8 POSTAR2 ENCODE chr1:183072750-183072811
64251 chr14 101419730 101419730 1 + A G UCEC 101419734 + 101419714 101419754 41 TGAGTCATGGACGATGAATACTACGTGTCTGAAACTCTGAG TGAGTCATGGACGATGGATACTACGTGTCTGAAACTCTGAG < 41bp 1 0.513810985904216 1 0.0715165138244629 experiment 0.972378028191568 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419734 chr14:101419730 . . 0 17 hm5C_associated_SNPs_42333 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 101419730 101419730 1 + A G UCEC 101419742 + 101419722 101419762 41 GGACGATGAATACTACGTGTCTGAAACTCTGAGGTCCAACA GGACGATGGATACTACGTGTCTGAAACTCTGAGGTCCAACA < 41bp 1 0.589852322778185 1 0.139557898044586 experiment 0.820295354443629 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419742 chr14:101419730 . . 0 9 hm5C_associated_SNPs_42334 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 101419730 101419730 1 + A G UCEC 101419748 + 101419728 101419768 41 TGAATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAAC TGGATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAAC < 41bp 1 0.335123920701841 1 0.245059907436371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419748 chr14:101419730 . . 0 3 hm5C_associated_SNPs_42335 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 101419730 101419730 1 + A G UCEC 101419750 + 101419730 101419770 41 AATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAACAT GATACTACGTGTCTGAAACTCTGAGGTCCAACAGAAAACAT < 41bp 1 0.755959695911556 1 0.594551384449005 experiment 0.488080608176888 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD114-3 ENSG00000201839 ncRNA_exonic Human snoRNA chr14:101419750 chr14:101419730 . . 0 1 hm5C_associated_SNPs_42336 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr14:101419713-101419734
64251 chr14 103931985 103931985 1 + C T UCEC 103931971 + 103931951 103931991 41 AGCAATGAATTTACTGTTGGCGGTAAACTCGACACGTTTTG AGCAATGAATTTACTGTTGGCGGTAAACTCGACATGTTTTG < 41bp 1 0.513018998928408 1 0.209697693586349 experiment 0.973962002143183 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARK3 ENSG00000075413 CDS Human protein_coding chr14:103931971 chr14:103931985 nonsynonymous SNV 0.966 4 35 hm5C_associated_SNPs_42337 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:103931920-103931985
64251 chr10 75551698 75551698 1 + G A UCEC 75551705 + 75551685 75551725 41 AACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGCTTCCGG AACACAAGAAGACACTGGAGCGGCTCTTCCCCGGCTTCCGG < 41bp 1 0.357024395938567 1 0.216671526432037 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551705 chr10:75551698 synonymous SNV . 0 14 hm5C_associated_SNPs_42339 0 0 3 GRWD1 POSTAR2 ENCODE chr10:75551658-75551711
64251 chr22 42273319 42273319 1 + C A UCEC 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGACTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG < 41bp 1 0.27274870768426 1 0.0247563421726227 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273319 stopgain 1.000 1 8 hm5C_associated_SNPs_42340 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:42273289-42273332
64251 chrX 41088594 41088594 1 + G A UCEC 41088595 + 41088575 41088615 41 GAATCACTATCAAAAAAGAGCATACCAGTGTATAAAATGTA GAATCACTATCAAAAAAGAACATACCAGTGTATAAAATGTA < 41bp 1 0.0070099614084932 1 0.0966778993606567 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41088595 chrX:41088594 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_42341 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:41088575-41088602
64251 chr3 190347218 190347218 1 + C T UCEC 190347220 + 190347200 190347240 41 ACCTCTGAGGATCTCAAGCGCAGCTATGTCTGTCATGCTAG ACCTCTGAGGATCTCAAGTGCAGCTATGTCTGTCATGCTAG < 41bp 1 0.403690360161975 1 0.0937489569187164 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IL1RAP ENSG00000196083 CDS Human protein_coding chr3:190347220 chr3:190347218 nonsynonymous SNV 0.994 4 19 hm5C_associated_SNPs_42343 0 0 1 GRWD1 POSTAR2 ENCODE chr3:190347131-190347296
64251 chr8 23147910 23147910 1 + G A UCEC 23147890 + 23147870 23147910 41 AGAGTCTGTTGGAGAAGAGGCTGGTGGCAGAGGAGGAAGAG AGAGTCTGTTGGAGAAGAGGCTGGTGGCAGAGGAGGAAGAA < 41bp 1 0.641896120537583 1 0.45251053571701 experiment 0.716207758924834 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147890 chr8:23147910 synonymous SNV . 0 41 hm5C_associated_SNPs_42344 0 0 1 FTO POSTAR2 ENCODE chr8:23147873-23147935
64251 chr8 23147910 23147910 1 + G A UCEC 23147913 + 23147893 23147933 41 GTGGCAGAGGAGGAAGAGGACGAAGAGGAGGTGGAAGAGGA GTGGCAGAGGAGGAAGAAGACGAAGAGGAGGTGGAAGAGGA < 41bp 1 0.699949057013783 1 0.628674864768982 experiment 0.600101885972434 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147913 chr8:23147910 synonymous SNV . 0 18 hm5C_associated_SNPs_42345 0 0 1 FTO POSTAR2 ENCODE chr8:23147873-23147935
64251 chr11 35684875 35684875 1 + C T UCEC 35684862 + 35684842 35684882 41 CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGG CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGATGGAGAGG < 41bp 1 0.36728512905751 1 0.359701991081238 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684862 chr11:35684875 synonymous SNV . 0 34 hm5C_associated_SNPs_42346 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684875 35684875 1 + C T UCEC 35684863 + 35684843 35684883 41 CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGG CACGGCTCCCAGGCCTGGACCCCGCCAGCTGATGGAGAGGG < 41bp 1 0.207002750506943 1 0.182311654090881 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684863 chr11:35684875 synonymous SNV . 0 33 hm5C_associated_SNPs_42347 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684875 35684875 1 + C T UCEC 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCCCAGGCCTGGACCCCGCCAGCTGATGGAGAGGGG < 41bp 1 0.267866900399943 1 0.566761255264282 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684875 synonymous SNV . 0 32 hm5C_associated_SNPs_42348 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr11 35684875 35684875 1 + C T UCEC 35684865 + 35684845 35684885 41 CGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGGG CGGCTCCCAGGCCTGGACCCCGCCAGCTGATGGAGAGGGGG < 41bp 1 0.753039326363965 1 0.762932300567627 experiment 0.493921347272071 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684865 chr11:35684875 synonymous SNV . 0 31 hm5C_associated_SNPs_42349 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr16 29994950 29994950 1 + C T UCEC 29994940 + 29994920 29994960 41 TCCGCCCGCCGCCGGGCCTACTGCCGTAACCGAGACCACTT TCCGCCCGCCGCCGGGCCTACTGCCGTAACTGAGACCACTT < 41bp 1 0.537258506029519 1 0.0906435549259186 experiment 0.925482987940962 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994940 chr16:29994950 stopgain 1.000 1 31 hm5C_associated_SNPs_42350 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr16:29994946-29994966
64251 chr9 131247123 131247123 1 + C T UCEC 131247109 + 131247089 131247129 41 CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGCGAGGAG CCATCCGAGCCCAGAAGGAGCGAGCCGAGAAGAGTGAGGAG < 41bp 1 0.417104763801387 1 0.447435587644577 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ODF2 ENSG00000136811 CDS Human protein_coding chr9:131247109 chr9:131247123 synonymous SNV . 0 35 hm5C_associated_SNPs_42351 0 0 7 GRWD1 POSTAR2 ENCODE chr9:131247031-131247147
64251 chrX 100667750 100667750 1 + T C UCEC 100667738 + 100667718 100667758 41 GGCTATAATGATGGATATGGCTTTGGGTCTGATAGATTTGG GGCTATAATGATGGATATGGCTTTGGGTCTGACAGATTTGG < 41bp 1 0.296787994151016 1 0.0440697968006134 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667738 chrX:100667750 synonymous SNV . 0 33 hm5C_associated_SNPs_42352 0 0 41 TARDBP POSTAR2 DRA001158,DRS012387 chrX:100667698-100667793
64251 chr1 160323974 160323974 1 + C T UCEC 160323975 + 160323955 160323995 41 TGCTGTCATCCTCAGGAGGCCAAATCAGTCCCAGCCTCTCC TGCTGTCATCCTCAGGAGGTCAAATCAGTCCCAGCCTCTCC < 41bp 1 0.330312397236528 1 0.0885326862335205 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323975 chr1:160323974 nonsynonymous SNV 0.054 0 20 hm5C_associated_SNPs_42353 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:160323934-160323976
64251 chr17 4859429 4859429 1 + C T UCEC 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCGGTGACCGAATTGATCCAGGCGTGAG < 41bp 1 0.606991093167764 1 0.226066023111343 experiment 0.786017813664472 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859429 nonsynonymous SNV 0.747 2 27 hm5C_associated_SNPs_42354 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859429 4859429 1 + C T UCEC 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCGGTGACCGAATTGATCCAGGCGTGAGT < 41bp 1 0.46031046801608 1 0.720873236656189 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859429 nonsynonymous SNV 0.747 2 26 hm5C_associated_SNPs_42355 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 46135807 46135807 1 + T C UCEC 46135824 + 46135804 46135844 41 GACTTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT GACCTCTTACTCTTCAGCCCCGAGGTGGAAAGCCTGCCTGT < 41bp 1 0.769727106213926 1 0.735332131385803 experiment 0.460545787572147 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46135824 chr17:46135807 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_42356 0 0 22 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46135721-46135834
64251 chr6 168291633 168291633 1 + G T UCEC 168291650 + 168291630 168291670 41 AAAGGAGAGAGCTGACGGGTCTGGCTATGGCTCCACCCTTC AAATGAGAGAGCTGACGGGTCTGGCTATGGCTCCACCCTTC < 41bp 1 0.644429912940727 1 0.271682739257812 experiment 0.711140174118546 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168291650 chr6:168291633 nonsynonymous SNV 0.233 0 4 hm5C_associated_SNPs_42357 0 0 9 FASTKD2 POSTAR2 ENCODE chr6:168291630-168291708
64251 chr3 73113194 73113194 1 + C T UCEC 73113185 + 73113165 73113205 41 ATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTT ATGGGCCTGGGACACCCAGGCCACTTAATTGACCAAAGGTT < 41bp 1 0.126708919517788 1 0.181844472885132 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113185 chr3:73113194 stopgain 0.999 1 30 hm5C_associated_SNPs_42358 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr3 73113194 73113194 1 + C T UCEC 73113186 + 73113166 73113206 41 TGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTT TGGGCCTGGGACACCCAGGCCACTTAATTGACCAAAGGTTT < 41bp 1 0.127485359570854 1 0.0560333132743835 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73113186 chr3:73113194 stopgain 0.999 1 29 hm5C_associated_SNPs_42359 0 0 7 EWSR1 POSTAR2 SRX029343 chr3:73113175-73113195
64251 chr7 150773121 150773121 1 + C A UCEC 150773103 + 150773083 150773123 41 CTGTCTCCGCCCCCCAGGTCCGGACCCTCCGTATGCACCTG CTGTCTCCGCCCCCCAGGTCCGGACCCTCCGTATGCACATG < 41bp 1 0.226338666360261 1 0.162856221199036 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150773103 chr7:150773121 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_42360 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:150773097-150773123
64251 chr4 186231893 186231893 1 + C T UCEC 186231908 + 186231888 186231928 41 GAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAG GAATCTGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAG < 41bp 1 0.0860752988770899 1 0.29104682803154 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX25 ENSG00000109762 CDS Human protein_coding chr4:186231908 chr4:186231893 stopgain 0.976 1 6 hm5C_associated_SNPs_42361 0 0 2 UCHL5 POSTAR2 ENCODE chr4:186231809-186231948
64251 chr22 39824053 39824053 1 + C A UCEC 39824063 + 39824043 39824083 41 TACCCTGTGTCTGTGCCATACTCCAGCGCCCAGAGCACCAG TACCCTGTGTATGTGCCATACTCCAGCGCCCAGAGCACCAG < 41bp 1 0.78658282441022 1 0.960173547267914 experiment 0.42683435117956 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control TAB1 ENSG00000100324 CDS Human protein_coding chr22:39824063 chr22:39824053 nonsynonymous SNV 0.927 4 11 hm5C_associated_SNPs_42363 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr22:39824037-39824058
64251 chr5 159437636 159437636 1 + C A UCEC 159437621 + 159437601 159437641 41 TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCCTGATC TACTCAGGAAGCCGAGTGTGCTGGCCCTCCAGTTCATGATC < 41bp 1 0.705031482874397 1 0.131040513515472 experiment 0.589937034251206 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437621 chr5:159437636 nonsynonymous SNV 0.873 0 36 hm5C_associated_SNPs_42365 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:159437615-159437639
64251 chrX 129149562 129149562 1 + G C UCEC 129149555 + 129149535 129149575 41 GACTGGGACCCTGGCACTGTCTGTTCAGCCTAGCGGTGGGG GACTGGGACCCTGGCACTGTCTGTTCACCCTAGCGGTGGGG < 41bp 1 0.159787010786856 1 0.146400600671768 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149555 chrX:129149562 nonsynonymous SNV 0.991 3 28 hm5C_associated_SNPs_42368 0 0 1 FMR1 POSTAR2 ENCODE chrX:129149562-129149626
64251 chr17 7401148 7401148 1 + C T UCEC 7401133 + 7401113 7401153 41 GACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGAC GACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAATATGAC < 41bp 1 0.669275777652009 1 0.923181116580963 experiment 0.661448444695981 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7401133 chr17:7401148 synonymous SNV . 0 36 hm5C_associated_SNPs_42369 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr17:7401132-7401185
64251 chr7 157041145 157041145 1 + C T UCEC 157041160 + 157041140 157041180 41 GTGGACATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA GTGGATATTCACCACCTCGCCTCCCTAGACCCTGAGGTGTA < 41bp 1 0.36029357119837 1 0.519984483718872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157041160 chr7:157041145 synonymous SNV . 0 6 hm5C_associated_SNPs_42370 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:157041096-157041145
64251 chr4 26622294 26622294 1 + A G UCEC 26622308 + 26622288 26622328 41 TGGTATACATGAGGAAAGCACAGGTTGGCTATTGTTCAATT TGGTATGCATGAGGAAAGCACAGGTTGGCTATTGTTCAATT < 41bp 1 0.457727634309379 1 0.282842457294464 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26622308 chr4:26622294 nonsynonymous SNV 0.999 4 7 hm5C_associated_SNPs_42371 0 0 1 DDX24 POSTAR2 ENCODE chr4:26622234-26622311
64251 chr12 95868070 95868070 1 + A G UCEC 95868059 + 95868039 95868079 41 CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAAGACGAAAGA CTCTACGGCTGAGGAAGCAGCCAAGAAAAAAGGACGAAAGA < 41bp 1 0.337174305225717 1 0.424514412879944 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95868059 chr12:95868070 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_42372 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:95868020-95868080
64251 chr19 58904831 58904831 1 + T C UCEC 58904832 + 58904812 58904852 41 ACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACC ACGACAGGCTGTGGATGTGCCCCCCCTGCGCCGTGTGAACC < 41bp 1 0.229397221088465 1 0.039327472448349 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904832 chr19:58904831 nonsynonymous SNV 0.980 4 20 hm5C_associated_SNPs_42373 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58904741-58904852
64251 chr19 58904831 58904831 1 + T C UCEC 58904833 + 58904813 58904853 41 CGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCA CGACAGGCTGTGGATGTGCCCCCCCTGCGCCGTGTGAACCA < 41bp 1 0.402124554561466 1 0.127671182155609 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904833 chr19:58904831 nonsynonymous SNV 0.980 4 19 hm5C_associated_SNPs_42374 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58904741-58904852
64251 chr19 58904831 58904831 1 + T C UCEC 58904834 + 58904814 58904854 41 GACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAG GACAGGCTGTGGATGTGCCCCCCCTGCGCCGTGTGAACCAG < 41bp 1 0.394610867394323 1 0.183890104293823 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904834 chr19:58904831 nonsynonymous SNV 0.980 4 18 hm5C_associated_SNPs_42375 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58904741-58904852
64251 chr19 58904831 58904831 1 + T C UCEC 58904840 + 58904820 58904860 41 CTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGTGAGC CTGTGGATGTGCCCCCCCTGCGCCGTGTGAACCAGGTGAGC < 41bp 1 0.769327257933656 1 0.42689460515976 experiment 0.461345484132687 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904840 chr19:58904831 nonsynonymous SNV 0.980 4 12 hm5C_associated_SNPs_42376 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58904741-58904852
64251 chr19 58904831 58904831 1 + T C UCEC 58904843 + 58904823 58904863 41 TGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGTGAGCCTG TGGATGTGCCCCCCCTGCGCCGTGTGAACCAGGTGAGCCTG < 41bp 1 0.519373531902105 1 0.0957700312137604 experiment 0.96125293619579 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904843 chr19:58904831 nonsynonymous SNV 0.980 4 9 hm5C_associated_SNPs_42377 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58904741-58904852
64251 chr14 24784940 24784940 1 + C T UCEC 24784923 + 24784903 24784943 41 TTCATCTCTCTGCTGGCTATCATCCTGCTGTCAGTGGCGCT TTCATCTCTCTGCTGGCTATCATCCTGCTGTCAGTGGTGCT < 41bp 1 0.0997423541695306 1 0.691152334213257 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LTB4R ENSG00000213903 CDS Human protein_coding chr14:24784923 chr14:24784940 nonsynonymous SNV 0.980 1 38 hm5C_associated_SNPs_42378 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:24784926-24784953
64251 chr17 80426686 80426686 1 + C A UCEC 80426677 + 80426657 80426697 41 GCACAAAGTGCTGGTAGTGTCTGTGTGTCCTCAATCTTTGC GCACAAAGTGCTGGTAGTGTCTGTGTGTCATCAATCTTTGC < 41bp 1 0.523163815354948 1 0.365755677223206 experiment 0.953672369290104 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NARF ENSG00000141562 CDS Human protein_coding chr17:80426677 chr17:80426686 nonsynonymous SNV 0.997 4 30 hm5C_associated_SNPs_42380 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80426641-80426696
64251 chr16 14970244 14970244 1 + C T UCEC 14970225 + 14970205 14970245 41 TCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGAGATCC TCCCCTCTTAGAAAGCTGCCCAGGGAAGCTGATCGAGATTC < 41bp 1 0.633486977869217 1 0.692391395568848 experiment 0.733026044261567 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14970225 chr16:14970244 synonymous SNV . 0 40 hm5C_associated_SNPs_42381 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:14970234-14970272
64251 chr5 7885823 7885823 1 + T C UCEC 7885818 + 7885798 7885838 41 TTTGGCTCTTCTCTAGAATACAGACTTTTCCTATCAGCCTG TTTGGCTCTTCTCTAGAATACAGACCTTTCCTATCAGCCTG < 41bp 1 0.323511221091989 1 0.363283932209015 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885818 chr5:7885823 nonsynonymous SNV 0.959 0 26 hm5C_associated_SNPs_42382 0 0 2 U2AF2 POSTAR2 ENCODE chr5:7885794-7885874
64251 chr5 7885823 7885823 1 + T C UCEC 7885822 + 7885802 7885842 41 GCTCTTCTCTAGAATACAGACTTTTCCTATCAGCCTGGAGA GCTCTTCTCTAGAATACAGACCTTTCCTATCAGCCTGGAGA < 41bp 1 0.0161034813128289 1 0.0157137215137482 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885822 chr5:7885823 nonsynonymous SNV 0.959 0 22 hm5C_associated_SNPs_42383 0 0 2 U2AF2 POSTAR2 ENCODE chr5:7885794-7885874
64251 chr5 7885823 7885823 1 + T C UCEC 7885828 + 7885808 7885848 41 CTCTAGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTT CTCTAGAATACAGACCTTTCCTATCAGCCTGGAGATGCCTT < 41bp 1 0.108631622202054 1 0.0849094390869141 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885828 chr5:7885823 nonsynonymous SNV 0.959 0 16 hm5C_associated_SNPs_42384 0 0 2 U2AF2 POSTAR2 ENCODE chr5:7885794-7885874
64251 chr5 7885823 7885823 1 + T C UCEC 7885832 + 7885812 7885852 41 AGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGC AGAATACAGACCTTTCCTATCAGCCTGGAGATGCCTTCAGC < 41bp 1 0.472273744423838 1 0.260106205940247 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885832 chr5:7885823 nonsynonymous SNV 0.959 0 12 hm5C_associated_SNPs_42385 0 0 2 U2AF2 POSTAR2 ENCODE chr5:7885794-7885874
64251 chr5 7885823 7885823 1 + T C UCEC 7885835 + 7885815 7885855 41 ATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGCGTG ATACAGACCTTTCCTATCAGCCTGGAGATGCCTTCAGCGTG < 41bp 1 0.239218974978599 1 0.093623161315918 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885835 chr5:7885823 nonsynonymous SNV 0.959 0 9 hm5C_associated_SNPs_42386 0 0 2 U2AF2 POSTAR2 ENCODE chr5:7885794-7885874
64251 chr15 42984685 42984685 1 + A G UCEC 42984694 + 42984674 42984714 41 CCAGGACGAACACATTCGAACAGGGCACACAGACCCTCGGC CCAGGACGAACGCATTCGAACAGGGCACACAGACCCTCGGC < 41bp 1 0.598826532994324 1 0.932207345962524 experiment 0.802346934011351 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control STARD9 ENSG00000159433 CDS Human protein_coding chr15:42984694 chr15:42984685 nonsynonymous SNV 0.005 1 12 hm5C_associated_SNPs_42387 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:42984672-42984711
64251 chr12 121858125 121858125 1 + C T UCEC 121858127 + 121858107 121858147 41 TGATGATGAAGAAGAAAACGCAGAGGATCGGGTGAGGCCAC TGATGATGAAGAAGAAAATGCAGAGGATCGGGTGAGGCCAC < 41bp 1 0.759403019352118 1 0.824870407581329 experiment 0.481193961295764 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RNF34 ENSG00000170633 CDS Human protein_coding chr12:121858127 chr12:121858125 synonymous SNV . 0 19 hm5C_associated_SNPs_42388 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:121858080-121858128
64251 chr22 35783087 35783087 1 + G A UCEC 35783079 + 35783059 35783099 41 ACCAAGTTCAAGCAGCTCTACCGCTCCCGCATGAACTCCCT ACCAAGTTCAAGCAGCTCTACCGCTCCCACATGAACTCCCT < 41bp 1 0.158597315069459 1 0.119621396064758 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783079 chr22:35783087 nonsynonymous SNV 0.999 4 29 hm5C_associated_SNPs_42390 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr7 30673468 30673468 1 + G A UCEC 30673480 + 30673460 30673500 41 AGACAATCGAGGAATGAGGACAATTTTGACAACTTTTGACC AGACAATCAAGGAATGAGGACAATTTTGACAACTTTTGACC < 41bp 1 0.145390015782179 1 0.0721597075462341 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30673480 chr7:30673468 nonsynonymous SNV 0.971 2 9 hm5C_associated_SNPs_42391 3 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:30673400-30673475
64251 chr14 50088660 50088660 1 + C A UCEC 50088661 + 50088641 50088681 41 TTCGGCCATTATAGAGAGGCCAAATTCTCCCAGACCAAACA TTCGGCCATTATAGAGAGGACAAATTCTCCCAGACCAAACA < 41bp 1 0.239652547588387 1 0.0889347791671753 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088661 chr14:50088660 nonsynonymous SNV 1.000 5 20 hm5C_associated_SNPs_42392 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:50088635-50088686
64251 chr11 110333081 110333081 1 + A G UCEC 110333093 + 110333073 110333113 41 TACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATC TACAGATCGCGGTTGGGCTGCCAAATCTGTTTGACAAAATC < 41bp 1 0.237209209517454 1 0.258347004652023 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333093 chr11:110333081 synonymous SNV . 0 9 hm5C_associated_SNPs_42393 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr11 110333081 110333081 1 + A G UCEC 110333094 + 110333074 110333114 41 ACAGATCACGGTTGGGCTGCCAAATCTGTTTGACAAAATCT ACAGATCGCGGTTGGGCTGCCAAATCTGTTTGACAAAATCT < 41bp 1 0.241756529597667 1 0.595916926860809 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FDX1 ENSG00000137714 CDS Human protein_coding chr11:110333094 chr11:110333081 synonymous SNV . 0 8 hm5C_associated_SNPs_42394 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110333073-110333102
64251 chr7 99751574 99751574 1 + C T UCEC 99751560 + 99751540 99751580 41 TTTGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCCCATTGA TTTGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCTCATTGA < 41bp 1 0.689348408849697 1 0.326058685779572 experiment 0.621303182300607 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751560 chr7:99751574 nonsynonymous SNV 0.993 4 35 hm5C_associated_SNPs_42395 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:99751541-99751576
64251 chr13 111164385 111164385 1 + C T UCEC 111164391 + 111164371 111164411 41 TGCAATGGAGGCCGCGGCACCTGCCACTACTACGCCAACAA TGCAATGGAGGCCGTGGCACCTGCCACTACTACGCCAACAA < 41bp 1 0.198963330123534 1 0.423755407333374 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111164391 chr13:111164385 synonymous SNV . 0 15 hm5C_associated_SNPs_42396 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:111164372-111164404
64251 chr3 183855520 183855520 1 + C T UCEC 183855522 + 183855502 183855542 41 GATGCCAAGGCTTTGGTGCGCTCTGACTTTCTTCTGGTGTA GATGCCAAGGCTTTGGTGTGCTCTGACTTTCTTCTGGTGTA < 41bp 1 0.411045236414716 1 0.117634236812592 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183855522 chr3:183855520 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_42397 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:183855516-183855537
64251 chr11 68363648 68363648 1 + C T UCEC 68363639 + 68363619 68363659 41 AAAGCAAGACTTGTTTGAACCCAGCAGTGCCAACACGGAGG AAAGCAAGACTTGTTTGAACCCAGCAGTGTCAACACGGAGG < 41bp 1 0.216282610614432 1 0.335182011127472 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68363639 chr11:68363648 nonsynonymous SNV 0.001 0 30 hm5C_associated_SNPs_42398 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:68363580-68363661
64251 chr2 46607464 46607464 1 + C A UCEC 46607459 + 46607439 46607479 41 GCCCCATCTGCCCCGAGGAGCGGCTCTTGGCGGAGAACCCA GCCCCATCTGCCCCGAGGAGCGGCTATTGGCGGAGAACCCA < 41bp 1 0.461628502412598 1 0.469905465841293 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46607459 chr2:46607464 synonymous SNV . 0 26 hm5C_associated_SNPs_42401 0 0 1 NOL12 POSTAR2 ENCODE chr2:46607401-46607469
64251 chr5 34824169 34824169 1 + G A UCEC 34824175 + 34824155 34824195 41 GATAACCACGCTGCGGACTGCAGCAAAAGAGATGGAAGAAA GATAACCACGCTGCAGACTGCAGCAAAAGAGATGGAAGAAA < 41bp 1 0.533560698039737 1 0.337712854146957 experiment 0.932878603920526 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAI14 ENSG00000039560 CDS Human protein_coding chr5:34824175 chr5:34824169 nonsynonymous SNV 0.476 2 15 hm5C_associated_SNPs_42402 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:34824160-34824180
64251 chr5 34824169 34824169 1 + G A UCEC 34824178 + 34824158 34824198 41 AACCACGCTGCGGACTGCAGCAAAAGAGATGGAAGAAAAAA AACCACGCTGCAGACTGCAGCAAAAGAGATGGAAGAAAAAA < 41bp 1 0.344344394875288 1 0.446523427963257 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RAI14 ENSG00000039560 CDS Human protein_coding chr5:34824178 chr5:34824169 nonsynonymous SNV 0.476 2 12 hm5C_associated_SNPs_42403 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:34824160-34824180
64251 chr17 15929916 15929916 1 + C A UCEC 15929902 + 15929882 15929922 41 CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCCTATATT CTACCCTGGATGCACAGGGCCGCTTTGATGAGGCATATATT < 41bp 1 0.138025550809593 1 0.0389781296253204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15929902 chr17:15929916 synonymous SNV . 0 35 hm5C_associated_SNPs_42405 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:15929883-15929916
64251 chr7 135312777 135312777 1 + G A UCEC 135312770 + 135312750 135312790 41 TCATCCCTACCCCAGTGGATCGCTACCGCCAGATTCTCCTC TCATCCCTACCCCAGTGGATCGCTACCACCAGATTCTCCTC < 41bp 1 0.463508123704327 1 0.10894900560379 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312770 chr7:135312777 nonsynonymous SNV 0.997 3 28 hm5C_associated_SNPs_42406 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135312748-135312781
64251 chr22 41922351 41922351 1 + A G UCEC 41922331 + 41922311 41922351 41 TGGCTCAAGTTCCGTGGGCACTTGGATAACATCTCCAACAA TGGCTCAAGTTCCGTGGGCACTTGGATAACATCTCCAACAG < 41bp 1 0.564311413260971 1 0.302980244159698 experiment 0.871377173478059 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41922331 chr22:41922351 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_42408 0 0 1 EWSR1 POSTAR2 SRX029344 chr22:41922335-41922355
64251 chr6 155154258 155154258 1 + G T UCEC 155154268 + 155154248 155154288 41 GGACGAGACAGAATTCAAAACACTTGGGTTCCCCCTCCTCA GGACGAGACATAATTCAAAACACTTGGGTTCCCCCTCCTCA < 41bp 1 0.175392691712041 1 0.0952976942062378 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155154268 chr6:155154258 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_42409 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:155154204-155154264
64251 chr20 62904615 62904615 1 + G A UCEC 62904609 + 62904589 62904629 41 GCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACC GCAGCCTCCAGGACTTGGCTCGCATCACCATCCGGGGCACC < 41bp 1 0.369911401022184 1 0.0282723605632782 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904609 chr20:62904615 nonsynonymous SNV 0.981 1 27 hm5C_associated_SNPs_42410 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62904615-62904636
64251 chr14 23070611 23070611 1 + C T UCEC 23070600 + 23070580 23070620 41 GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCC GCTGGCTGAGTAGCTGGCTGCCCACGTGGCGTCCCACTTCC < 41bp 1 0.340799935055549 1 0.157898485660553 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070600 chr14:23070611 synonymous SNV . 0 32 hm5C_associated_SNPs_42412 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chrX 73046732 73046732 1 - G A UCEC 73046721 - 73046701 73046741 41 TCTTAAGACCTGGGACAGGACACATGGAAGGCCTAAGAACT TCTTAAGACTTGGGACAGGACACATGGAAGGCCTAAGAACT < 41bp 1 0.225935056132295 1 0.164149910211563 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046721 chrX:73046732 . . 0 10 hm5C_associated_SNPs_42413 0 0 76 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chrX 73046732 73046732 1 - G A UCEC 73046726 - 73046706 73046746 41 AGAAGTCTTAAGACCTGGGACAGGACACATGGAAGGCCTAA AGAAGTCTTAAGACTTGGGACAGGACACATGGAAGGCCTAA < 41bp 1 0.556106599556242 1 0.420597970485687 experiment 0.887786800887517 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046726 chrX:73046732 . . 0 15 hm5C_associated_SNPs_42414 0 0 76 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73046713-73046734
64251 chr12 58190174 58190174 1 + C T UCEC 58190183 + 58190163 58190203 41 CATGTGGTGGGCATGGCCCCCCTCTCTGTTGGCTCCCTGGA CATGTGGTGGGTATGGCCCCCCTCTCTGTTGGCTCCCTGGA < 41bp 1 0.216589861148652 1 0.170396208763123 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TSFM ENSG00000123297 CDS Human protein_coding chr12:58190183 chr12:58190174 synonymous SNV . 0 12 hm5C_associated_SNPs_42415 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:58190160-58190180
64251 chr3 183369012 183369012 1 + C T UCEC 183369020 + 183369000 183369040 41 CATGAAGCAAGACGGTACCACATACTTGGGAATGAAATGAT CATGAAGCAAGATGGTACCACATACTTGGGAATGAAATGAT < 41bp 1 0.108383855628327 1 0.135109484195709 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183369020 chr3:183369012 nonsynonymous SNV 0.931 4 13 hm5C_associated_SNPs_42417 0 0 3 RBM15 POSTAR2 ENCODE chr3:183368993-183369064
64251 chr17 34147395 34147395 1 + C A UCEC 34147392 + 34147372 34147412 41 AGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGA AGCAGAGCTCATATAGCCAGCAAACATATAATAACCAGGGA < 41bp 1 0.158250103607022 1 0.625971496105194 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF15 ENSG00000172660 CDS Human other chr17:34147392 chr17:34147395 nonsynonymous SNV 0.919 1 24 hm5C_associated_SNPs_42418 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:34147340-34147420
64251 chr3 45559431 45559431 1 + G A UCEC 45559415 + 45559395 45559435 41 CTGATGCTCTCCCTGGGGTGCTGAGATGGCAACAACGACTG CTGATGCTCTCCCTGGGGTGCTGAGATGGCAACAACAACTG < 41bp 1 0.419679888542982 1 0.22841939330101 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LARS2 ENSG00000011376 CDS Human protein_coding chr3:45559415 chr3:45559431 nonsynonymous SNV 0.905 4 37 hm5C_associated_SNPs_42419 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:45559397-45559431
64251 chr12 44166772 44166772 1 + G A UCEC 44166754 + 44166734 44166774 41 TTATGAATTGAAGAATGTCACAAATAACTTTGATGAACGAC TTATGAATTGAAGAATGTCACAAATAACTTTGATGAACAAC < 41bp 1 0.207581245579461 1 0.346153438091278 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control IRAK4 ENSG00000198001 CDS Human protein_coding chr12:44166754 chr12:44166772 nonsynonymous SNV 0.802 1 39 hm5C_associated_SNPs_42421 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:44166765-44166793
64251 chr7 148963445 148963445 1 + A G UCEC 148963456 + 148963436 148963476 41 CAGACAAGCACACAGAGGACCAGAGTCCTTCGACACCCTTG CAGACAAGCGCACAGAGGACCAGAGTCCTTCGACACCCTTG < 41bp 1 0.4549142765361 1 0.50784569978714 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF783 ENSG00000204946 CDS Human protein_coding chr7:148963456 chr7:148963445 nonsynonymous SNV 0.019 1 10 hm5C_associated_SNPs_42432 0 0 2 SF3B4 POSTAR2 ENCODE chr7:148963402-148963459
64251 chr16 67662303 67662303 1 + C T UCEC 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCTACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG < 41bp 1 0.26157589917805 1 0.153874635696411 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662303 nonsynonymous SNV 0.536 4 5 hm5C_associated_SNPs_42433 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:67662278-67662309
64251 chrX 205502 205502 1 + C T UCEC 205500 + 205480 205520 41 AACAAGGCCTTGCCCTGCATCACGCGCCCTGTCGTGCTGAA AACAAGGCCTTGCCCTGCATCATGCGCCCTGTCGTGCTGAA < 41bp 1 0.223397858486591 1 0.0702100992202759 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205500 chrX:205502 nonsynonymous SNV 0.016 1 23 hm5C_associated_SNPs_42434 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205490-205510
64251 chr17 48166613 48166613 1 + G A UCEC 48166618 + 48166598 48166638 41 CCAGCTGGCAGACTCGGGACCAATACTACTGACGTCCTCCC CCAGCTGGCAGACTCAGGACCAATACTACTGACGTCCTCCC < 41bp 1 0.360449989303375 1 0.14400726556778 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ITGA3 ENSG00000005884 CDS Human protein_coding chr17:48166618 chr17:48166613 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_42435 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:48166584-48166627
64251 chr10 96333847 96333847 1 + G A UCEC 96333846 + 96333826 96333866 41 AATTCTTTTTTGACCCAGTCCGGAAGTGTAATGGTCAGCCA AATTCTTTTTTGACCCAGTCCAGAAGTGTAATGGTCAGCCA < 41bp 1 0.781018007311698 1 0.511721193790436 experiment 0.437963985376603 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HELLS ENSG00000119969 CDS Human protein_coding chr10:96333846 chr10:96333847 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_42444 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr10:96333771-96333851
64251 chr16 31473251 31473251 1 + C A UCEC 31473271 + 31473251 31473291 41 CTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC ATTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC < 41bp 1 0.693488378588585 1 0.582305431365967 experiment 0.613023242822829 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31473271 chr16:31473251 nonsynonymous SNV 0.999 2 1 hm5C_associated_SNPs_42454 0 0 1 GRWD1 POSTAR2 ENCODE chr16:31473247-31473303
64251 chr2 160623840 160623840 1 + T G UCEC 160623826 + 160623806 160623846 41 GATTCCGAAGAAGACGGAGACCATAACAGGACATTTGATAT GATTCCGAAGAAGACGGAGACCATAACAGGACATGTGATAT < 41bp 1 0.260865721901588 1 0.12898525595665 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160623826 chr2:160623840 nonsynonymous SNV 0.998 3 35 hm5C_associated_SNPs_42455 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:160623785-160623841
64251 chr8 37968308 37968308 1 + G A UCEC 37968305 + 37968285 37968325 41 GGCCAACCTGACATGGCAGTCCCGAACACAGGATGAACATC GGCCAACCTGACATGGCAGTCCCAAACACAGGATGAACATC < 41bp 1 0.371147430806923 1 0.351732909679413 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASH2L ENSG00000129691 CDS Human protein_coding chr8:37968305 chr8:37968308 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_42456 0 0 4 FXR2 POSTAR2 ENCODE chr8:37968277-37968340
64251 chr11 101981863 101981863 1 + T G UCEC 101981844 + 101981824 101981864 41 AGACCGTGCCCATGAGGCTCCGGAAGCTGCCCGACTCCTTC AGACCGTGCCCATGAGGCTCCGGAAGCTGCCCGACTCCTGC < 41bp 1 0.787615871297223 1 0.589774072170258 experiment 0.424768257405554 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YAP1 ENSG00000137693 CDS Human protein_coding chr11:101981844 chr11:101981863 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_42457 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:101981862-101981863
64251 chrX 48457786 48457786 1 + C T UCEC 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTTGTTCTG < 41bp 1 0.318688365106252 1 0.0583165287971497 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457786 nonsynonymous SNV 0.996 3 35 hm5C_associated_SNPs_42458 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457786 48457786 1 + C T UCEC 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTTGTTCTGT < 41bp 1 0.296777855377245 1 0.331882536411285 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457786 nonsynonymous SNV 0.996 3 34 hm5C_associated_SNPs_42459 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chrX 48457786 48457786 1 + C T UCEC 48457774 + 48457754 48457794 41 ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTC ATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTTGTTCTGTC < 41bp 1 0.704204316134545 1 0.687524080276489 experiment 0.591591367730909 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457774 chrX:48457786 nonsynonymous SNV 0.996 3 33 hm5C_associated_SNPs_42460 0 0 7 DDX24 POSTAR2 ENCODE chrX:48457774-48457857
64251 chr2 54845327 54845327 1 + G A UCEC 54845324 + 54845304 54845344 41 GCCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGG GCCTCACTAAACTGTTGGACCCCAAAGGTAGGGACTCAAGG < 41bp 1 0.132791179544548 1 0.115882217884064 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845324 chr2:54845327 nonsynonymous SNV 0.903 4 24 hm5C_associated_SNPs_42461 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845327 54845327 1 + G A UCEC 54845325 + 54845305 54845345 41 CCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGG CCTCACTAAACTGTTGGACCCCAAAGGTAGGGACTCAAGGG < 41bp 1 0.179695905511655 1 0.18105486035347 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845325 chr2:54845327 nonsynonymous SNV 0.903 4 23 hm5C_associated_SNPs_42462 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845327 54845327 1 + G A UCEC 54845326 + 54845306 54845346 41 CTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGGA CTCACTAAACTGTTGGACCCCAAAGGTAGGGACTCAAGGGA < 41bp 1 0.282574499809941 1 0.481099307537079 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845326 chr2:54845327 nonsynonymous SNV 0.903 4 22 hm5C_associated_SNPs_42463 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr5 154251406 154251406 1 + A G UCEC 154251388 + 154251368 154251408 41 TCTGAACCTTTTCTTCCCATCCATTTATGATGTGAAATACC TCTGAACCTTTTCTTCCCATCCATTTATGATGTGAAATGCC < 41bp 1 0.0496736451996391 1 0.146324068307877 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT8 ENSG00000155508 CDS Human protein_coding chr5:154251388 chr5:154251406 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_42465 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:154251393-154251425
64251 chr18 3457617 3457617 1 + T G UCEC 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATCCCCGGGATCAGTGTTGGCTCGTCCATCAG < 41bp 1 0.513421759692052 1 0.0564537048339844 experiment 0.973156480615896 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457617 synonymous SNV . 0 25 hm5C_associated_SNPs_42466 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:3457599-3457625
64251 chr18 3457617 3457617 1 + T G UCEC 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCCCCGGGATCAGTGTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.641844171380511 1 0.184645682573318 experiment 0.716311657238979 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457617 synonymous SNV . 0 16 hm5C_associated_SNPs_42467 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:3457599-3457625
64251 chr1 36354036 36354036 1 + G A UCEC 36354031 + 36354011 36354051 41 GCCTCTTTGTCTTGTAGCTGCGGGCGCTTACCTGCCCCCCC GCCTCTTTGTCTTGTAGCTGCGGGCACTTACCTGCCCCCCC < 41bp 1 0.656246277162497 1 0.892173528671265 experiment 0.687507445675006 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO1 ENSG00000092847 CDS Human protein_coding chr1:36354031 chr1:36354036 nonsynonymous SNV 0.995 0 26 hm5C_associated_SNPs_42468 0 0 4 METAP2 POSTAR2 ENCODE chr1:36354029-36354094
64251 chr16 30964934 30964934 1 + G A UCEC 30964947 + 30964927 30964967 41 CAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA CAGCACCATCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA < 41bp 1 0.288277989464642 1 0.088845819234848 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964947 chr16:30964934 synonymous SNV . 0 8 hm5C_associated_SNPs_42469 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr7 141255334 141255334 1 + C T UCEC 141255330 + 141255310 141255350 41 CTACAGCTGGGCTCTGCCTGCTGACCTGGGGAGGCCATTGG CTACAGCTGGGCTCTGCCTGCTGATCTGGGGAGGCCATTGG < 41bp 1 0.560998891790157 1 0.256607830524445 experiment 0.878002216419686 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141255330 chr7:141255334 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_42470 0 0 4 DDX3X POSTAR2 ENCODE chr7:141255259-141255357
64251 chr17 3572633 3572633 1 + C A UCEC 3572638 + 3572618 3572658 41 GTCCTGCTCTCCCTGCTCCTCATTCTCAAGGCGGGAAGGAG GTCCTGCTCTCCCTGATCCTCATTCTCAAGGCGGGAAGGAG < 41bp 1 0.131438367951521 1 0.106980085372925 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EMC6 ENSG00000127774 CDS Human protein_coding chr17:3572638 chr17:3572633 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_42472 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:3572561-3572646
64251 chr15 42111135 42111135 1 + A G UCEC 42111122 + 42111102 42111142 41 GGGCGGCAAGCAGCAAGGACCATCCTCTCCCCAAAGGGCTT GGGCGGCAAGCAGCAAGGACCATCCTCTCCCCAGAGGGCTT < 41bp 1 0.260614228574598 1 0.159453243017197 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42111122 chr15:42111135 synonymous SNV . 0 34 hm5C_associated_SNPs_42473 0 0 1 ZNF622 POSTAR2 ENCODE chr15:42111066-42111142
64251 chr6 126210657 126210657 1 + C T UCEC 126210642 + 126210622 126210662 41 TGATGTTGAACTGAAGGGGGCGCTAGATTTAGAAACCTGTG TGATGTTGAACTGAAGGGGGCGCTAGATTTAGAAATCTGTG < 41bp 1 0.272540450312557 1 0.233351022005081 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210642 chr6:126210657 nonsynonymous SNV 0.994 1 36 hm5C_associated_SNPs_42475 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr6:126210642-126210663
64251 chr17 47004393 47004393 1 + G A UCEC 47004386 + 47004366 47004406 41 CCCTCTTGATGCGCCTGGGACTGATACGTCAGAAAGTGCTG CCCTCTTGATGCGCCTGGGACTGATACATCAGAAAGTGCTG < 41bp 1 0.254216762063744 1 0.0799285769462585 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004386 chr17:47004393 nonsynonymous SNV 0.995 1 28 hm5C_associated_SNPs_42477 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47004370-47004485
64251 chr9 91077524 91077524 1 + G T UCEC 91077534 + 91077514 91077554 41 GTTACCCAGTGGAAAGGAACCGTTCTGGACCAGGTGCCTGT GTTACCCAGTTGAAAGGAACCGTTCTGGACCAGGTGCCTGT < 41bp 1 0.171071336983046 1 0.119755804538727 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077534 chr9:91077524 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_42478 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:91077487-91077525
64251 chr9 91077524 91077524 1 + G T UCEC 91077544 + 91077524 91077564 41 GGAAAGGAACCGTTCTGGACCAGGTGCCTGTAAATCCTTCT TGAAAGGAACCGTTCTGGACCAGGTGCCTGTAAATCCTTCT < 41bp 1 0.497322812499702 1 0.316522538661957 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077544 chr9:91077524 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_42479 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:91077487-91077525
64251 chr2 28521313 28521313 1 + C T UCEC 28521298 + 28521278 28521318 41 TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCCGTACA TGGACAGCTTTACTCCCAGGCCCAAAAAAATTATCTGTACA < 41bp 1 0.18217685342567 1 0.146111130714417 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28521298 chr2:28521313 nonsynonymous SNV 0.903 4 36 hm5C_associated_SNPs_42480 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:28521297-28521319
64251 chr4 123192856 123192856 1 + C A UCEC 123192859 + 123192839 123192879 41 AGGAATATTGGAAAAGTCTTCAGAAACATTTGGACCAGCAG AGGAATATTGGAAAAGTATTCAGAAACATTTGGACCAGCAG < 41bp 1 0.323264673484092 1 0.749978542327881 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123192859 chr4:123192856 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_42483 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr4:123192849-123192879
64251 chr7 150840476 150840476 1 + C A UCEC 150840477 + 150840457 150840497 41 AGTATGAACAGAAGCTCTTCCTGGCCCCACTGCCAAGCTCA AGTATGAACAGAAGCTCTTACTGGCCCCACTGCCAAGCTCA < 41bp 1 0.39056338823274 1 0.231147319078445 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGAP3 ENSG00000133612 CDS Human protein_coding chr7:150840477 chr7:150840476 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_42484 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:150840471-150840493
64251 chr12 53647893 53647893 1 + G A UCEC 53647877 + 53647857 53647897 41 CTGCTGTCATGGTGATGGCTCTGCTGGCAGTGGTGGGACTC CTGCTGTCATGGTGATGGCTCTGCTGGCAGTGGTGGAACTC < 41bp 1 0.571970348904264 1 0.32958522439003 experiment 0.856059302191472 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647877 chr12:53647893 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_42485 0 0 4 PTBP1 POSTAR2 GSE19323,GSM480477 chr12:53647880-53647900
64251 chr19 50385595 50385595 1 + G A UCEC 50385593 + 50385573 50385613 41 GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGC GCAGCCACAGCCTGAGGGAGCCACCTCCGACCTTCCCCCGC < 41bp 1 0.194328529915407 1 0.140281856060028 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385593 chr19:50385595 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_42487 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50385595 50385595 1 + G A UCEC 50385594 + 50385574 50385614 41 CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC CAGCCACAGCCTGAGGGAGCCACCTCCGACCTTCCCCCGCC < 41bp 1 0.474809161741029 1 0.239550113677979 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385594 chr19:50385595 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_42488 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr10 51581298 51581298 1 + G T UCEC 51581313 + 51581293 51581333 41 CTGAAGATTCAACTGTCCTGCTCTTTGAAGCTGACACAATT CTGAATATTCAACTGTCCTGCTCTTTGAAGCTGACACAATT < 41bp 1 0.157515808118018 1 0.0411920845508575 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCOA4 ENSG00000138293 CDS Human other chr10:51581313 chr10:51581298 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_42489 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:51581289-51581355
64251 chr7 11076076 11076076 1 + G A UCEC 11076066 + 11076046 11076086 41 CAAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAAAGCA CAAGGATCAATGCCCGGCTTCAGCAGTATCATGCCAAAGCA < 41bp 1 0.743113559392933 1 0.210555195808411 experiment 0.513772881214134 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHF14 ENSG00000106443 CDS Human protein_coding chr7:11076066 chr7:11076076 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_42490 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:11076064-11076085
64251 chrX 107838772 107838772 1 + G A UCEC 107838784 + 107838764 107838804 41 CTGCATTGGAACTGGTATTTCAGGGCCTCCAGGTCAACCTG CTGCATTGAAACTGGTATTTCAGGGCCTCCAGGTCAACCTG < 41bp 1 0.78172691730853 1 0.716053485870361 experiment 0.436546165382939 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107838784 chrX:107838772 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_42491 0 0 1 EIF3D POSTAR2 ENCODE chrX:107838760-107838820
64251 chr10 103917297 103917297 1 + G T UCEC 103917292 + 103917272 103917312 41 ATGATGATGATGAGGAGGACCAAAAGAAACAGCCTGTCCAG ATGATGATGATGAGGAGGACCAAAATAAACAGCCTGTCCAG < 41bp 1 0.759958729697026 1 0.467622697353363 experiment 0.480082540605949 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917292 chr10:103917297 nonsynonymous SNV 0.948 2 26 hm5C_associated_SNPs_42492 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:103917194-103917301
64251 chr7 150933632 150933632 1 + G A UCEC 150933614 + 150933594 150933634 41 AAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCT AAGGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCACT < 41bp 1 0.358352135923695 1 0.87986147403717 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933614 chr7:150933632 nonsynonymous SNV 0.995 1 39 hm5C_associated_SNPs_42493 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150933619-150933657
64251 chr7 150933632 150933632 1 + G A UCEC 150933616 + 150933596 150933636 41 GGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCGCTCT GGTACCCTCATGTACCGGCTCCACAAACGCTTCAGCACTCT < 41bp 1 0.235053465040721 1 0.103213548660278 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHPF2 ENSG00000033100 CDS Human protein_coding chr7:150933616 chr7:150933632 nonsynonymous SNV 0.995 1 37 hm5C_associated_SNPs_42494 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150933619-150933657
64251 chr17 27074254 27074254 1 + A G UCEC 27074259 + 27074239 27074279 41 TCTTCAAGTGCCCTGAGGACCAGCTTCCTCTGGACTATGCC TCTTCAAGTGCCCTGGGGACCAGCTTCCTCTGGACTATGCC < 41bp 1 0.431313943885087 1 0.336327075958252 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27074259 chr17:27074254 stoploss 1.000 3 16 hm5C_associated_SNPs_42503 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27074233-27074270
64251 chr17 74944110 74944110 1 + G A UCEC 74944107 + 74944087 74944127 41 GCACCGACACCTGCCTGGACCACGGGCTAATCTGTGAGCCC GCACCGACACCTGCCTGGACCACAGGCTAATCTGTGAGCCC < 41bp 1 0.526252878024742 1 0.344940423965454 experiment 0.947494243950515 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MGAT5B ENSG00000167889 CDS Human protein_coding chr17:74944107 chr17:74944110 nonsynonymous SNV 0.432 4 24 hm5C_associated_SNPs_42504 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:74944087-74944144
64251 chr5 21491512 21491512 1 + C T UCEC 21491518 + 21491498 21491538 41 TCAGAAAACAAAGTCGTGGACAACCAGGCTGGGACCCAGGG TCAGAAAACAAAGTTGTGGACAACCAGGCTGGGACCCAGGG < 41bp 1 0.135963793496021 1 0.090019553899765 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21491518 chr5:21491512 . . 0 15 hm5C_associated_SNPs_42506 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:21491473-21491512
64251 chr14 73577700 73577700 1 + G A UCEC 73577703 + 73577683 73577723 41 CTGAAACCTACTCTGAGGCCCATCAGCTCTGCTCCATCTGT CTGAAACCTACTCTGAGACCCATCAGCTCTGCTCCATCTGT < 41bp 1 0.441201359539228 1 0.260441929101944 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73577703 chr14:73577700 synonymous SNV . 0 18 hm5C_associated_SNPs_42507 0 0 42 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:73577639-73577719
64251 chr6 33243789 33243789 1 + C T UCEC 33243772 + 33243752 33243792 41 TGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA TGATCACCATTATGCAGAATCCACGCCAGTACAAGATTCCA < 41bp 1 0.207448088727419 1 0.0644068121910095 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243772 chr6:33243789 synonymous SNV . 0 38 hm5C_associated_SNPs_42508 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chrX 129159318 129159318 1 + G T UCEC 129159311 + 129159291 129159331 41 AAATATCAGACTGGGGAGTACCTGACAGAGCAAGAAGACGA AAATATCAGACTGGGGAGTACCTGACATAGCAAGAAGACGA < 41bp 1 0.117680311488331 1 0.16925585269928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129159311 chrX:129159318 stopgain 0.774 0 28 hm5C_associated_SNPs_42509 0 0 1 UCHL5 POSTAR2 ENCODE chrX:129159255-129159353
64251 chr9 37486787 37486787 1 + G T UCEC 37486792 + 37486772 37486812 41 CCAACCCCAGGAAGAGGAATCAACGGATCCTGGTAAGTGAA CCAACCCCAGGAAGATGAATCAACGGATCCTGGTAAGTGAA < 41bp 1 0.545315632293601 1 0.538872957229614 experiment 0.909368735412798 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486792 chr9:37486787 nonsynonymous SNV 0.994 3 16 hm5C_associated_SNPs_42510 0 0 2 BUD13 POSTAR2 ENCODE chr9:37486763-37486795
64251 chr9 131011004 131011004 1 + A G UCEC 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACCGTGAGGGACCTCATGCCCAGGACCATCATG < 41bp 1 0.36047383435455 1 0.0553626120090485 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131011004 nonsynonymous SNV 0.997 4 31 hm5C_associated_SNPs_42512 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr4 6862966 6862966 1 + G A UCEC 6862975 + 6862955 6862995 41 GATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAG GATTCGCCCTCACTCGTGGTCTTCTGGCTCCAGTGAAGCAG < 41bp 1 0.276859502079025 1 0.0555087029933929 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6862975 chr4:6862966 nonsynonymous SNV 0.996 4 12 hm5C_associated_SNPs_42513 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:6862960-6862973
64251 chrX 48457290 48457290 1 + G A UCEC 48457272 + 48457252 48457292 41 CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTG CCAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCATG < 41bp 1 0.633453426121606 1 0.850570797920227 experiment 0.733093147756789 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457272 chrX:48457290 nonsynonymous SNV 0.998 4 39 hm5C_associated_SNPs_42515 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48457281-48457305
64251 chrX 48457290 48457290 1 + G A UCEC 48457273 + 48457253 48457293 41 CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCGTGC CAGCGCTACGGGCCCCTCTCCGAGCCAGGCAGTGCTCATGC < 41bp 1 0.63402328580179 1 0.640731513500214 experiment 0.73195342839642 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457273 chrX:48457290 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_42516 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48457281-48457305
64251 chr2 24964689 24964689 1 + C T UCEC 24964700 + 24964680 24964720 41 CAACGTCAGCGGGAACTGTACAGTCAACAGCACCGACAGAG CAACGTCAGTGGGAACTGTACAGTCAACAGCACCGACAGAG < 41bp 1 0.292288531621516 1 0.140121936798096 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964700 chr2:24964689 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_42517 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:24964681-24964718
64251 chr1 12027096 12027096 1 + A C UCEC 12027087 + 12027067 12027107 41 CCCCATCTTCACGGAGGTGGCCTGTGATGAGCTGGTGGAGG CCCCATCTTCACGGAGGTGGCCTGTGATGCGCTGGTGGAGG < 41bp 1 0.209854006582732 1 0.118773102760315 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12027087 chr1:12027096 nonsynonymous SNV 0.989 4 30 hm5C_associated_SNPs_42519 0 0 8 DDX24 POSTAR2 ENCODE chr1:12027089-12027143
64251 chr16 845189 845189 1 + T C UCEC 845172 + 845152 845192 41 GCGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTG GCGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGCGTG < 41bp 1 0.332293525279355 1 0.386926561594009 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845172 chr16:845189 nonsynonymous SNV 0.124 4 38 hm5C_associated_SNPs_42520 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:845172-845216
64251 chr14 23794471 23794471 1 + G A UCEC 23794459 + 23794439 23794479 41 CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATG CTCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCAACATCATG < 41bp 1 0.275005368109227 1 0.216796487569809 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794459 chr14:23794471 synonymous SNV . 0 33 hm5C_associated_SNPs_42521 0 0 37 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr14 23794471 23794471 1 + G A UCEC 23794460 + 23794440 23794480 41 TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCGACATCATGG TCCTTCTTTCTTCCAGGGGCCGGGCTAGAGCAACATCATGG < 41bp 1 0.426437284792031 1 0.421277284622192 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control BCL2L2-PABPN1;PABPN1 ENSG00000100836;ENSG00000258643 CDS Human other chr14:23794460 chr14:23794471 synonymous SNV . 0 32 hm5C_associated_SNPs_42522 0 0 37 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:23794258-23794487
64251 chr8 11679280 11679280 1 + C A UCEC 11679261 + 11679241 11679281 41 TTACGGTTTCCATTTCAGATCTCCCTTGAGTTTAGAAATCT TTACGGTTTCCATTTCAGATCTCCCTTGAGTTTAGAAATAT < 41bp 1 0.238330409270666 1 0.037088930606842 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11679261 chr8:11679280 nonsynonymous SNV 0.997 4 40 hm5C_associated_SNPs_42523 0 0 21 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:11679258-11679286
64251 chr11 62550244 62550244 1 + C T UCEC 62550249 + 62550229 62550269 41 GCAGATCCTGTGCGGCCGCTCTGCTGCCACTATGGAGCCGT GCAGATCCTGTGCGGTCGCTCTGCTGCCACTATGGAGCCGT < 41bp 1 0.724914082629176 1 0.493057101964951 experiment 0.550171834741647 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62550249 chr11:62550244 nonsynonymous SNV 0.999 3 16 hm5C_associated_SNPs_42524 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:62550232-62550272
64251 chrX 73040937 73040937 1 - G T UCEC 73040931 - 73040911 73040951 41 AGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGATTA AGTAACACCCCTTTATTCAGCTGGGGATGGGGAATGGATTA < 41bp 1 0.62218822293119 1 0.736357390880585 experiment 0.75562355413762 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040931 chrX:73040937 . . 0 15 hm5C_associated_SNPs_42525 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:73040433-73040993
64251 chrX 73040937 73040937 1 - G T UCEC 73040934 - 73040914 73040954 41 CTCAGTAACACCCCTTTCTTCAGCTGGGGATGGGGAATGGA CTCAGTAACACCCCTTTATTCAGCTGGGGATGGGGAATGGA < 41bp 1 0.33620326234882 1 0.233541995286942 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040934 chrX:73040937 . . 0 18 hm5C_associated_SNPs_42526 0 0 44 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:73040433-73040993
64251 chrX 73044129 73044129 1 - T G UCEC 73044128 - 73044108 73044148 41 AAGTAGGAAAATTTGAATAACAATGATTATCTTTTGAATAC AAGTAGGAAAATTTGAATACCAATGATTATCTTTTGAATAC < 41bp 1 0.0929466263462026 1 0.0641671419143677 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044128 chrX:73044129 . . 0 20 hm5C_associated_SNPs_42529 0 0 51 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr2 24888632 24888632 1 + G A UCEC 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACGGAAAAGAGGCACAGGGAGCAAGAAAATAAATA < 41bp 1 0.333660214063979 1 0.540680348873138 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888632 nonsynonymous SNV 1.000 5 20 hm5C_associated_SNPs_42530 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:24888629-24888650
64251 chr16 56659785 56659785 1 + G A UCEC 56659789 + 56659769 56659809 41 CCCCAACTGCTCTTGCGCCACTGGTAAGGGAAGCTCTGCGC CCCCAACTGCTCTTGCACCACTGGTAAGGGAAGCTCTGCGC < 41bp 1 0.698556618685714 1 0.448570430278778 experiment 0.602886762628573 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MT1E ENSG00000169715 CDS Human protein_coding chr16:56659789 chr16:56659785 nonsynonymous SNV 0.951 0 17 hm5C_associated_SNPs_42531 0 0 8 DDX3X POSTAR2 ENCODE chr16:56659709-56659789
64251 chr4 110581369 110581369 1 + G T UCEC 110581382 + 110581362 110581402 41 ATTTATAGACATGGCCTTCCCTTGGTAACACTTACCTTGCC ATTTATATACATGGCCTTCCCTTGGTAACACTTACCTTGCC < 41bp 1 0.616880716738651 1 0.361482322216034 experiment 0.766238566522699 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCUB ENSG00000005059 CDS Human protein_coding chr4:110581382 chr4:110581369 nonsynonymous SNV 0.991 2 8 hm5C_associated_SNPs_42533 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:110581366-110581412
64251 chr19 36572463 36572463 1 + C A UCEC 36572466 + 36572446 36572486 41 CACTGGCAGAAAAACATCTTCAGCAATGTGAGTGGCTTCCT CACTGGCAGAAAAACATATTCAGCAATGTGAGTGGCTTCCT < 41bp 1 0.639301434155118 1 0.673614382743835 experiment 0.721397131689765 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR62 ENSG00000075702 CDS Human protein_coding chr19:36572466 chr19:36572463 synonymous SNV . 0 18 hm5C_associated_SNPs_42534 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36572445-36572463
64251 chr5 138994181 138994181 1 + G A UCEC 138994200 + 138994180 138994220 41 GGCAAGCTACAATAATGGGGCCAGTAAGTATTCAGATTAAT GACAAGCTACAATAATGGGGCCAGTAAGTATTCAGATTAAT < 41bp 1 0.0496387442643511 1 0.0743628442287445 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2D2 ENSG00000131508 CDS Human protein_coding chr5:138994200 chr5:138994181 stopgain 1.000 1 2 hm5C_associated_SNPs_42535 0 0 6 BUD13 POSTAR2 ENCODE chr5:138994162-138994212
64251 chrX 123224572 123224572 1 + A G UCEC 123224558 + 123224538 123224578 41 AGATTACGGCCTGAGGATAGCTTCATGAGTGTTTATCCAAT AGATTACGGCCTGAGGATAGCTTCATGAGTGTTTGTCCAAT < 41bp 1 0.513668491893146 1 0.122413009405136 experiment 0.972663016213709 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123224558 chrX:123224572 nonsynonymous SNV 0.996 2 35 hm5C_associated_SNPs_42537 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:123224523-123224589
64251 chr11 107968463 107968463 1 + A G UCEC 107968473 + 107968453 107968493 41 TTCTCAGTGAACCAGGAGTTCAGTTTAATGTAAGCTCGTTA TTCTCAGTGAGCCAGGAGTTCAGTTTAATGTAAGCTCGTTA < 41bp 1 0.278065031999705 1 0.200038969516754 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968473 chr11:107968463 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_42538 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr12 12940260 12940260 1 + T G UCEC 12940241 + 12940221 12940261 41 CAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTTT CAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTGT < 41bp 1 0.493632623505502 1 0.142049014568329 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APOLD1 ENSG00000178878 CDS Human protein_coding chr12:12940241 chr12:12940260 nonsynonymous SNV 0.988 0 40 hm5C_associated_SNPs_42539 0 0 4 RBM15 POSTAR2 GSE78030,GSM2064710 chr12:12940259-12940260
64251 chr10 102672917 102672917 1 + C A UCEC 102672904 + 102672884 102672924 41 TGCCCGCTAGGCCAGGTTTCCCCTCATCCCCAGCCCCGGGG TGCCCGCTAGGCCAGGTTTCCCCTCATCCCCAGACCCGGGG < 41bp 1 0.266862908384134 1 0.0878105163574219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102672904 chr10:102672917 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_42540 0 0 1 UCHL5 POSTAR2 ENCODE chr10:102672772-102673010
64251 chr2 204082005 204082005 1 + T G UCEC 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCGAAAATTGTGGGGATCGAGCAAGCGGCTCAGCCAGA < 41bp 1 0.264571303055722 1 0.371687531471252 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204082005 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_42541 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr12 57588462 57588462 1 + G A UCEC 57588474 + 57588454 57588494 41 TGAACATGGCGAGGACGAGACCCACTGCAGTGAGTGACCAC TGAACATGACGAGGACGAGACCCACTGCAGTGAGTGACCAC < 41bp 1 0.0288748672830388 1 0.0284607112407684 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57588474 chr12:57588462 nonsynonymous SNV 0.952 4 9 hm5C_associated_SNPs_42543 0 0 2 PPIG POSTAR2 ENCODE chr12:57588456-57588482
64251 chr16 2814603 2814603 1 + G A UCEC 2814601 + 2814581 2814621 41 TTAAAGAAGATTTGAATGGACCGTTTCTTAATCAGCTGGAA TTAAAGAAGATTTGAATGGACCATTTCTTAATCAGCTGGAA < 41bp 1 0.0184768912229442 1 0.0382657051086426 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814601 chr16:2814603 synonymous SNV . 0 23 hm5C_associated_SNPs_42544 0 0 44 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr16 2814603 2814603 1 + G A UCEC 2814613 + 2814593 2814633 41 TGAATGGACCGTTTCTTAATCAGCTGGAAACAGATCCATCT TGAATGGACCATTTCTTAATCAGCTGGAAACAGATCCATCT < 41bp 1 0.273285323012059 1 0.842301368713379 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814613 chr16:2814603 synonymous SNV . 0 11 hm5C_associated_SNPs_42545 0 0 44 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814520-2814620
64251 chr11 74717354 74717354 1 + T C UCEC 74717350 + 74717330 74717370 41 CTGGATCTTGCACTGTGGGCCCTGTGGCTACTCTGATCTGG CTGGATCTTGCACTGTGGGCCCTGCGGCTACTCTGATCTGG < 41bp 1 0.094254434909665 1 0.171345561742783 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEU3 ENSG00000162139 CDS Human protein_coding chr11:74717350 chr11:74717354 synonymous SNV . 0 25 hm5C_associated_SNPs_42546 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:74717337-74717358
64251 chr1 54666004 54666004 1 + G A UCEC 54665990 + 54665970 54666010 41 CGGCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATG CGGCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGACGTATG < 41bp 1 0.422867146688521 1 0.289273291826248 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665990 chr1:54666004 nonsynonymous SNV 0.999 2 35 hm5C_associated_SNPs_42547 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:54665985-54666012
64251 chr1 54666004 54666004 1 + G A UCEC 54665992 + 54665972 54666012 41 GCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGGCGTATGAG GCCTTGGGGGCTTCGGGGCCCCGAGACGCGGGACGTATGAG < 41bp 1 0.539818336843114 1 0.63768082857132 experiment 0.920363326313773 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54665992 chr1:54666004 nonsynonymous SNV 0.999 2 33 hm5C_associated_SNPs_42548 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:54665985-54666012
64251 chr12 53663546 53663546 1 + G A UCEC 53663559 + 53663539 53663579 41 CATCAGCGCAGTGGAGAAGGCTCACAGTTACCTAAGGAACA CATCAGCACAGTGGAGAAGGCTCACAGTTACCTAAGGAACA < 41bp 1 0.242984930829415 1 0.0364626944065094 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663559 chr12:53663546 nonsynonymous SNV 0.003 0 8 hm5C_associated_SNPs_42549 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53663542-53663571
64251 chr19 18971131 18971131 1 + G A UCEC 18971127 + 18971107 18971147 41 TACTTCTTTCCCTCCCCTCACAGCGGATCGTGTGAAGAAGG TACTTCTTTCCCTCCCCTCACAGCAGATCGTGTGAAGAAGG < 41bp 1 0.199544399360779 1 0.475180745124817 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18971127 chr19:18971131 synonymous SNV . 0 25 hm5C_associated_SNPs_42550 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:18971120-18971140
64251 chr6 64394838 64394838 1 + G A UCEC 64394837 + 64394817 64394857 41 GTTGGGTTATTGTGAAGATGCGGAGTCTAATAGGCAGTTGG GTTGGGTTATTGTGAAGATGCAGAGTCTAATAGGCAGTTGG < 41bp 1 0.487353249644604 1 0.421457856893539 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64394837 chr6:64394838 synonymous SNV . 0 22 hm5C_associated_SNPs_42551 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64394693-64394965
64251 chr6 31638950 31638950 1 + C T UCEC 31638959 + 31638939 31638979 41 TTCCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGAC TTCCCGACATCTGGACGTGCCACTTCTGCCTCGTAGAAGAC < 41bp 1 0.29150893555523 1 0.044761598110199 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638959 chr6:31638950 nonsynonymous SNV 0.067 3 12 hm5C_associated_SNPs_42552 0 0 12 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr6:31638935-31638956
64251 chr6 31638950 31638950 1 + C T UCEC 31638961 + 31638941 31638981 41 CCCGACATCCGGACGTGCCACTTCTGCCTCGTAGAAGACCC CCCGACATCTGGACGTGCCACTTCTGCCTCGTAGAAGACCC < 41bp 1 0.341837947709164 1 0.0358472466468811 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LY6G5B ENSG00000240053;ENSG00000263020 CDS Human other chr6:31638961 chr6:31638950 nonsynonymous SNV 0.067 3 10 hm5C_associated_SNPs_42553 0 0 12 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr6:31638935-31638956
64251 chr3 37340487 37340487 1 + A C UCEC 37340497 + 37340477 37340517 41 TGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGTAAAA TGGATGAAAGCCTTCAAGAACTAGAAAAGATAAAGGTAAAA < 41bp 1 0.514008496267564 1 0.731858193874359 experiment 0.971983007464872 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37340497 chr3:37340487 nonsynonymous SNV 0.998 3 11 hm5C_associated_SNPs_42565 0 0 5 NOP58 POSTAR2 GSE43666,GSM1067862 chr3:37340452-37340490
64251 chr6 43168180 43168180 1 + C A UCEC 43168200 + 43168180 43168220 41 CTGGGCCAGATCGAAGACCACAGACGAACCCACCAACCCAT ATGGGCCAGATCGAAGACCACAGACGAACCCACCAACCCAT < 41bp 1 0.272347371557531 1 0.354589849710464 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CUL9 ENSG00000112659 CDS Human protein_coding chr6:43168200 chr6:43168180 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_42568 0 0 1 SF3B4 POSTAR2 ENCODE chr6:43168123-43168184
64251 chr13 27847398 27847398 1 + G A UCEC 27847416 + 27847396 27847436 41 TAGCCAATGAGCTGGGCAGCCTGTTCCTTGAAATTTCCACT TAACCAATGAGCTGGGCAGCCTGTTCCTTGAAATTTCCACT < 41bp 1 0.194035849504519 1 0.113515019416809 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RASL11A ENSG00000122035 CDS Human protein_coding chr13:27847416 chr13:27847398 nonsynonymous SNV 0.992 5 3 hm5C_associated_SNPs_42569 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:27847358-27847417
64251 chr4 123748442 123748442 1 + G A UCEC 123748458 + 123748438 123748478 41 GGGGGCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGA GGGGACTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGA < 41bp 1 0.133018932392923 1 0.0398847758769989 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748458 chr4:123748442 nonsynonymous SNV 0.998 4 5 hm5C_associated_SNPs_42570 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr4 123748442 123748442 1 + G A UCEC 123748462 + 123748442 123748482 41 GCTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGG ACTTCTTCCTGCGCATCCACCCCGACGGCCGAGTTGACGGG < 41bp 1 0.725499109230538 1 0.119404673576355 experiment 0.549001781538925 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748462 chr4:123748442 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_42571 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr9 116972007 116972007 1 + G A UCEC 116971988 + 116971968 116972008 41 TCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGA TCCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACAA < 41bp 1 0.162118842242027 1 0.739433586597443 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971988 chr9:116972007 nonsynonymous SNV 0.981 4 40 hm5C_associated_SNPs_42572 0 0 7 BUD13 POSTAR2 ENCODE chr9:116971992-116972008
64251 chr9 116972007 116972007 1 + G A UCEC 116971989 + 116971969 116972009 41 CCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACGAG CCCAGGGCTCTTCGGCCTGCCAGGGTCTGATGGAGAACAAG < 41bp 1 0.313335437254674 1 0.705039858818054 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116971989 chr9:116972007 nonsynonymous SNV 0.981 4 39 hm5C_associated_SNPs_42573 0 0 7 BUD13 POSTAR2 ENCODE chr9:116971992-116972008
64251 chr22 30038247 30038247 1 + C T UCEC 30038248 + 30038228 30038268 41 CTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTCCAG CTCCTGAGGCTTCTGTGCTTCTGGCTTCTTACGCCGTCCAG < 41bp 1 0.73664269416514 1 0.638636350631714 experiment 0.52671461166972 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NF2 ENSG00000186575 CDS Human protein_coding chr22:30038248 chr22:30038247 synonymous SNV . 0 20 hm5C_associated_SNPs_42575 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr22:30038221-30038256
64251 chr6 41557793 41557793 1 + G A UCEC 41557781 + 41557761 41557801 41 TTCCCAGATGGTCTCGTGCACCCCCCGACCTCGGCCGCAGC TTCCCAGATGGTCTCGTGCACCCCCCGACCTCAGCCGCAGC < 41bp 1 0.116781669903749 1 0.0395050346851349 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FOXP4 ENSG00000137166 CDS Human protein_coding chr6:41557781 chr6:41557793 synonymous SNV . 0 33 hm5C_associated_SNPs_42576 0 0 2 DDX24 POSTAR2 ENCODE chr6:41557752-41557874
64251 chr2 27257073 27257073 1 + C A UCEC 27257075 + 27257055 27257095 41 AGCCAAAGAAGGTGGCAACTCCTCCCAACCAAAACCAGAAG AGCCAAAGAAGGTGGCAAATCCTCCCAACCAAAACCAGAAG < 41bp 1 0.120516462957851 1 0.301713883876801 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27257075 chr2:27257073 nonsynonymous SNV 0.003 1 19 hm5C_associated_SNPs_42577 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr2:27257062-27257085
64251 chr19 45162148 45162148 1 + A G UCEC 45162132 + 45162112 45162152 41 TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCACTGT TCTATTGGTCCAAATGTTCCCGTGAGGTCCTTTGGCGCTGT < 41bp 1 0.676793552142939 1 0.621363997459412 experiment 0.646412895714121 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162132 chr19:45162148 nonsynonymous SNV 0.000 1 37 hm5C_associated_SNPs_42578 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chr19 45162148 45162148 1 + A G UCEC 45162140 + 45162120 45162160 41 TCCAAATGTTCCCGTGAGGTCCTTTGGCACTGTCATCTGTG TCCAAATGTTCCCGTGAGGTCCTTTGGCGCTGTCATCTGTG < 41bp 1 0.0277139774529658 1 0.0629242360591888 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PVR ENSG00000073008 CDS Human protein_coding chr19:45162140 chr19:45162148 nonsynonymous SNV 0.000 1 29 hm5C_associated_SNPs_42579 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:45162123-45162152
64251 chrX 73046027 73046027 1 - C A UCEC 73046010 - 73045990 73046030 41 GAAGAATTAGACAAGAAATACACAGATGTGCCAGACTTCTG GAATAATTAGACAAGAAATACACAGATGTGCCAGACTTCTG < 41bp 1 0.269008494355225 1 0.0677463412284851 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046010 chrX:73046027 . . 0 4 hm5C_associated_SNPs_42580 0 0 91 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chrX 73046027 73046027 1 - C A UCEC 73046036 - 73046016 73046056 41 TGTGAAGAGATGCTCCAGGCCAATGAGAAGAATTAGACAAG TGTGAAGAGATGCTCCAGGCCAATGAGAATAATTAGACAAG < 41bp 1 0.0970607820628192 1 0.150159567594528 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046036 chrX:73046027 . . 0 30 hm5C_associated_SNPs_42581 0 0 91 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr7 2686526 2686526 1 + G A UCEC 2686507 + 2686487 2686527 41 GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCGC GCCCTGCTGCTCCTGGGGGCCGCCGCCCTGGCCTGCCTCAC < 41bp 1 0.559754331288726 1 0.764960765838623 experiment 0.880491337422549 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686507 chr7:2686526 nonsynonymous SNV 0.990 3 40 hm5C_associated_SNPs_42582 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2686517-2686568
64251 chr1 20231420 20231420 1 + A C UCEC 20231415 + 20231395 20231435 41 AATAGTCCAGAACCTGGAAGCTGAAAATTATAATATTGAAT AATAGTCCAGAACCTGGAAGCTGAACATTATAATATTGAAT < 41bp 1 0.259258936116315 1 0.382936477661133 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20231415 chr1:20231420 nonsynonymous SNV 1.000 0 26 hm5C_associated_SNPs_42584 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:20231404-20231432
64251 chr5 131973782 131973782 1 + A G UCEC 131973793 + 131973773 131973813 41 ATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAAT ATATTGAATGCATAGAAATACGGTCTGATGCCGATGAAAAT < 41bp 1 0.105391431402809 1 0.147036492824554 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131973793 chr5:131973782 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_42585 0 0 2 AGGF1 POSTAR2 ENCODE chr5:131973772-131973814
64251 chr19 39944008 39944008 1 + C T UCEC 39944021 + 39944001 39944041 41 CGAAGAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG CGAAGAGTGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAG < 41bp 1 0.654253393380366 1 0.831600666046143 experiment 0.691493213239267 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944021 chr19:39944008 nonsynonymous SNV 0.771 2 8 hm5C_associated_SNPs_42587 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr19 39944008 39944008 1 + C T UCEC 39944025 + 39944005 39944045 41 GAGCGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC GAGTGGCGGAGTGCAGCGGGCAGTGAGAAAGAAGAAGAGCC < 41bp 1 0.352000085085906 1 0.416242837905884 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39944025 chr19:39944008 nonsynonymous SNV 0.771 2 4 hm5C_associated_SNPs_42588 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39944003-39944029
64251 chr20 37078069 37078069 1 + G A UCEC 37078054 + 37078034 37078074 41 CGGGCTGCCTGTGCTCTGGTCATCAATAACGCAGGGAGAGG CGGGCTGCCTGTGCTCTGGTCATCAATAACGCAGGAAGAGG < 41bp 1 0.258641562245139 1 0.0736136436462402 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078054 chr20:37078069 . . 0 36 hm5C_associated_SNPs_42589 0 0 9 METTL14 POSTAR2 GSE46705,GSM1135015 chr20:37078040-37078073
64251 chr12 57919755 57919755 1 + T C UCEC 57919754 + 57919734 57919774 41 CCAAGGCACAGCATCCCCCACTACCCCCTCCCAGCACTTTA CCAAGGCACAGCATCCCCCACCACCCCCTCCCAGCACTTTA < 41bp 1 0.0411809080466732 1 0.1813023686409 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919754 chr12:57919755 nonsynonymous SNV 0.990 1 22 hm5C_associated_SNPs_42590 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr12:57919754-57919755
64251 chr19 3525941 3525941 1 + A C UCEC 3525949 + 3525929 3525969 41 GGAGACCGCTTCATCCCCTCCAGAGCCGGAGCCAACTGGAG GGAGACCGCTTCCTCCCCTCCAGAGCCGGAGCCAACTGGAG < 41bp 1 0.433109378548596 1 0.834765076637268 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FZR1 ENSG00000105325 CDS Human protein_coding chr19:3525949 chr19:3525941 nonsynonymous SNV 0.983 4 13 hm5C_associated_SNPs_42592 0 0 3 GRWD1 POSTAR2 ENCODE chr19:3525913-3525999
64251 chr3 49736445 49736445 1 + A G UCEC 49736459 + 49736439 49736479 41 TTGAGAACCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA TTGAGAGCCTGTCCAGGGGCCTGGGTATGGCCTACTTCCCA < 41bp 1 0.557704395532724 1 0.1335229575634 experiment 0.884591208934553 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736459 chr3:49736445 nonsynonymous SNV 0.943 2 7 hm5C_associated_SNPs_42593 0 0 6 DDX24 POSTAR2 ENCODE chr3:49736412-49736445
64251 chr2 128944280 128944280 1 + T G UCEC 128944260 + 128944240 128944280 41 TTTTTTTAACCAAACAGGATCTGCCCAATAACATGATTCAT TTTTTTTAACCAAACAGGATCTGCCCAATAACATGATTCAG < 41bp 1 0.0470397378806748 1 0.168133944272995 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128944260 chr2:128944280 nonsynonymous SNV 0.998 4 41 hm5C_associated_SNPs_42595 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:128944260-128944280
64251 chr22 42262989 42262989 1 + C T UCEC 42263002 + 42262982 42263022 41 GCAGCAGCGGAGCTGTGGACCCTTCAGTGCAACGGTCATTC GCAGCAGTGGAGCTGTGGACCCTTCAGTGCAACGGTCATTC < 41bp 1 0.0270786656934844 1 0.0256856083869934 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42263002 chr22:42262989 synonymous SNV . 0 8 hm5C_associated_SNPs_42597 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:42262968-42263004
64251 chr3 51315081 51315081 1 + C A UCEC 51315093 + 51315073 51315113 41 TGGAGAGCCTCCTGGACGTGCTCTTGCAGACTCTGCTCACC TGGAGAGCATCCTGGACGTGCTCTTGCAGACTCTGCTCACC < 41bp 1 0.101654584656181 1 0.0538749098777771 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOCK3 ENSG00000088538 CDS Human protein_coding chr3:51315093 chr3:51315081 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_42598 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:51315071-51315085
64251 chrX 73041555 73041555 1 - G C UCEC 73041535 - 73041515 73041555 41 CCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAGGA GCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAGGA < 41bp 1 0.128792389196679 1 0.0893210172653198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041535 chrX:73041555 . . 0 1 hm5C_associated_SNPs_42599 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041555 73041555 1 - G C UCEC 73041537 - 73041517 73041557 41 GACCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAG GAGCTTTTCCGTTTTTAAATCACTCACAGAGGGTGGGACAG < 41bp 1 0.0873780742209063 1 0.0961666107177734 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041537 chrX:73041555 . . 0 3 hm5C_associated_SNPs_42600 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041555 73041555 1 - G C UCEC 73041549 - 73041529 73041569 41 TGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACTCACAG TGGCTGGGCTTTGAGCTTTTCCGTTTTTAAATCACTCACAG < 41bp 1 0.0776296505867938 1 0.114622473716736 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041549 chrX:73041555 . . 0 15 hm5C_associated_SNPs_42601 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041555 73041555 1 - G C UCEC 73041554 - 73041534 73041574 41 AGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTAAATCACT AGGCCTGGCTGGGCTTTGAGCTTTTCCGTTTTTAAATCACT < 41bp 1 0.00971162047301388 1 0.123138964176178 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041554 chrX:73041555 . . 0 20 hm5C_associated_SNPs_42602 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041555 73041555 1 - G C UCEC 73041561 - 73041541 73041581 41 TAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGTTTTTA TAAATGTAGGCCTGGCTGGGCTTTGAGCTTTTCCGTTTTTA < 41bp 1 0.0323969848577781 1 0.0608313083648682 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041561 chrX:73041555 . . 0 27 hm5C_associated_SNPs_42603 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chrX 73041555 73041555 1 - G C UCEC 73041566 - 73041546 73041586 41 TTCTCTAAATGTAGGCCTGGCTGGGCTTTGACCTTTTCCGT TTCTCTAAATGTAGGCCTGGCTGGGCTTTGAGCTTTTCCGT < 41bp 1 0.509193781134427 1 0.251679718494415 experiment 0.981612437731146 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73041566 chrX:73041555 . . 0 32 hm5C_associated_SNPs_42604 0 0 75 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73040440-73041874
64251 chr20 55049753 55049753 1 + G A UCEC 55049773 + 55049753 55049793 41 GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT ATCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT < 41bp 1 0.113756948904113 1 0.145820409059525 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049773 chr20:55049753 nonsynonymous SNV 0.954 0 1 hm5C_associated_SNPs_42605 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:55049733-55049759
64251 chr7 44100376 44100376 1 + C T UCEC 44100392 + 44100372 44100412 41 GCAGCCGACGACACAGAGATCTCCTTTGACCCCGAGAACCT GCAGTCGACGACACAGAGATCTCCTTTGACCCCGAGAACCT < 41bp 1 0.52135883301081 1 0.343518793582916 experiment 0.957282333978381 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44100392 chr7:44100376 nonsynonymous SNV 0.167 3 5 hm5C_associated_SNPs_42607 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44100354-44100414
64251 chr12 109604770 109604770 1 + G A UCEC 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCACACACTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG < 41bp 1 0.541686739575447 1 0.752779722213745 experiment 0.916626520849106 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604770 nonsynonymous SNV 0.975 3 7 hm5C_associated_SNPs_42608 0 0 2 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr18 77802168 77802168 1 + T C UCEC 77802159 + 77802139 77802179 41 CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT CTTTTGATGTCCCAGCAGACCCTGAGGAACGTGCCACCGAT < 41bp 1 0.57334642798511 1 0.176421970129013 experiment 0.85330714402978 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBFA ENSG00000101546 CDS Human protein_coding chr18:77802159 chr18:77802168 synonymous SNV . 0 30 hm5C_associated_SNPs_42609 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77802152-77802190
64251 chr1 31811841 31811841 1 + A C UCEC 31811833 + 31811813 31811853 41 GATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCA GATAGAATAAAAGTATCCCTCTCCATGACGGTTGTCAATCA < 41bp 1 0.793321569348603 1 0.989364504814148 experiment 0.413356861302793 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZCCHC17 ENSG00000121766 CDS Human protein_coding chr1:31811833 chr1:31811841 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_42610 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:31811813-31811842
64251 chr7 98528424 98528424 1 + C A UCEC 98528441 + 98528421 98528461 41 CTTCTCTTTGTCATGATGGACTTAACTGGAGAGGTAGGTGA CTTATCTTTGTCATGATGGACTTAACTGGAGAGGTAGGTGA < 41bp 1 0.103495836038603 1 0.0800579488277435 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98528441 chr7:98528424 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_42611 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98528394-98528443
64251 chr10 76729436 76729436 1 + A C UCEC 76729423 + 76729403 76729443 41 TTTTTATTCTCATAGGACACCCATCCTGTTTGAAATTTTGT TTTTTATTCTCATAGGACACCCATCCTGTTTGACATTTTGT < 41bp 1 0.00306168844661873 1 0.0770283043384552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76729423 chr10:76729436 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_42612 0 0 2 UCHL5 POSTAR2 ENCODE chr10:76729417-76729482
64251 chr9 96427992 96427992 1 + G A UCEC 96427976 + 96427956 96427996 41 CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACGAGCC CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACAAGCC < 41bp 1 0.128858466187671 1 0.10044914484024 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96427976 chr9:96427992 synonymous SNV . 0 37 hm5C_associated_SNPs_42613 0 0 1 AGGF1 POSTAR2 ENCODE chr9:96427969-96427995
64251 chr11 68125236 68125236 1 + G A UCEC 68125248 + 68125228 68125268 41 TGACCATCGACCTGGAGGAGCAGAAGCTCTACTGGGCTGAC TGACCATCAACCTGGAGGAGCAGAAGCTCTACTGGGCTGAC < 41bp 1 0.398657101750798 1 0.49801766872406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68125248 chr11:68125236 nonsynonymous SNV 0.993 4 9 hm5C_associated_SNPs_42614 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr11:68125197-68125236
64251 chr16 70589085 70589085 1 + G A UCEC 70589071 + 70589051 70589091 41 AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAGCTGGTC AGCGACAAGTGGTGATTGCCCTGACAGGAGGAGAACTGGTC < 41bp 1 0.27872067714265 1 0.170178830623627 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589071 chr16:70589085 synonymous SNV . 0 35 hm5C_associated_SNPs_42615 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589085 70589085 1 + G A UCEC 70589086 + 70589066 70589106 41 TTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT TTGCCCTGACAGGAGGAGAACTGGTCTATTTCGAGATGGAT < 41bp 1 0.249773827392358 1 0.187183886766434 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589086 chr16:70589085 synonymous SNV . 0 20 hm5C_associated_SNPs_42616 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589085 70589085 1 + G A UCEC 70589091 + 70589071 70589111 41 CTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTGT CTGACAGGAGGAGAACTGGTCTATTTCGAGATGGATCCTGT < 41bp 1 0.0915385305607325 1 0.07593634724617 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589091 chr16:70589085 synonymous SNV . 0 15 hm5C_associated_SNPs_42617 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr3 5215727 5215727 1 + A G UCEC 5215729 + 5215709 5215749 41 TGCTTGGAAACAAGAGAGATCTTCCTAATGCCTTGGATGAG TGCTTGGAAACAAGAGAGGTCTTCCTAATGCCTTGGATGAG < 41bp 1 0.0798117041178507 1 0.0536289513111115 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ARL8B ENSG00000134108 CDS Human protein_coding chr3:5215729 chr3:5215727 nonsynonymous SNV 1.000 5 19 hm5C_associated_SNPs_42618 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:5215719-5215730
64251 chr12 112915759 112915759 1 + G A UCEC 112915765 + 112915745 112915785 41 GACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGAT GACTTTTGGCGGATAGTGTTCCAAGAAAACTCCCGAGTGAT < 41bp 1 0.284589537212332 1 0.271362066268921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915765 chr12:112915759 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_42619 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr12 112915759 112915759 1 + G A UCEC 112915766 + 112915746 112915786 41 ACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGATT ACTTTTGGCGGATAGTGTTCCAAGAAAACTCCCGAGTGATT < 41bp 1 0.749122127823223 1 0.259222239255905 experiment 0.501755744353553 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915766 chr12:112915759 nonsynonymous SNV 0.998 4 14 hm5C_associated_SNPs_42620 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr6 4935981 4935981 1 + A G UCEC 4935980 + 4935960 4936000 41 CTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATC CTTGTTATCCACAAAGTCCTCGGAGAATAACTCACTAAATC < 41bp 1 0.694985945967313 1 0.857805252075195 experiment 0.610028108065373 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935980 chr6:4935981 synonymous SNV . 0 22 hm5C_associated_SNPs_42622 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:4935947-4936001
64251 chr19 50912082 50912082 1 + C A UCEC 50912092 + 50912072 50912112 41 CTTCTCCTCGCTGTACCCGTCCATCATGATGGCCCACAACC CTTCTCCTCGATGTACCCGTCCATCATGATGGCCCACAACC < 41bp 1 0.0236484174951916 1 0.0264444053173065 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912092 chr19:50912082 nonsynonymous SNV 0.937 4 11 hm5C_associated_SNPs_42623 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50912040-50912120
64251 chr19 52786571 52786571 1 + T C UCEC 52786569 + 52786549 52786589 41 CCTGACCTGAGTATTATCTCCATGATGAAGCAAAGGACAGA CCTGACCTGAGTATTATCTCCACGATGAAGCAAAGGACAGA < 41bp 1 0.773722581727767 1 0.28875470161438 experiment 0.452554836544466 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52786569 chr19:52786571 nonsynonymous SNV 0.013 0 23 hm5C_associated_SNPs_42624 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:52786542-52786580
64251 chr12 53647860 53647860 1 + C T UCEC 53647877 + 53647857 53647897 41 CTGCTGTCATGGTGATGGCTCTGCTGGCAGTGGTGGGACTC CTGTTGTCATGGTGATGGCTCTGCTGGCAGTGGTGGGACTC < 41bp 1 0.597288132959038 1 0.391644418239594 experiment 0.805423734081924 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647877 chr12:53647860 nonsynonymous SNV 0.996 0 4 hm5C_associated_SNPs_42625 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:53647840-53647860
64251 chr8 145140264 145140264 1 + C T UCEC 145140252 + 145140232 145140272 41 CACAGGCCATGGGACTGGCCCTCTATGTCCTGCCAGTGCTG CACAGGCCATGGGACTGGCCCTCTATGTCCTGTCAGTGCTG < 41bp 1 0.564543424167308 1 0.753306031227112 experiment 0.870913151665385 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145140252 chr8:145140264 nonsynonymous SNV 0.792 4 33 hm5C_associated_SNPs_42627 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:145140254-145140290
64251 chr10 102684005 102684005 1 + G A UCEC 102684010 + 102683990 102684030 41 ATTCTGGCAATTCTGGCCACCATTCTACCAGGAATAGTGAC ATTCTGGCAATTCTGACCACCATTCTACCAGGAATAGTGAC < 41bp 1 0.0285633615265114 1 0.363856196403503 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684010 chr10:102684005 nonsynonymous SNV 0.990 3 16 hm5C_associated_SNPs_42628 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:102684000-102684020
64251 chr1 114483616 114483616 1 + T C UCEC 114483597 + 114483577 114483617 41 AAGTCTTGGAGTTCCTAGGCCGGGGGACATTTGGACAGGTG AAGTCTTGGAGTTCCTAGGCCGGGGGACATTTGGACAGGCG < 41bp 1 0.702424490958001 1 0.7472083568573 experiment 0.595151018083999 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483597 chr1:114483616 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_42629 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483585-114483620
64251 chr1 114483616 114483616 1 + T C UCEC 114483612 + 114483592 114483632 41 TAGGCCGGGGGACATTTGGACAGGTGGCTAAGTGCTGGAAG TAGGCCGGGGGACATTTGGACAGGCGGCTAAGTGCTGGAAG < 41bp 1 0.570668363301706 1 0.619864106178284 experiment 0.858663273396587 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483612 chr1:114483616 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_42630 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483585-114483620
64251 chr1 120286589 120286589 1 + G A UCEC 120286594 + 120286574 120286614 41 ACCTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCT ACCTGGCACGTCATGAGCATCTCCTCCTTGCTGCCCAGCCT < 41bp 1 0.477433402032281 1 0.226268261671066 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286594 chr1:120286589 nonsynonymous SNV 0.999 1 16 hm5C_associated_SNPs_42631 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286589 120286589 1 + G A UCEC 120286596 + 120286576 120286616 41 CTGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGG CTGGCACGTCATGAGCATCTCCTCCTTGCTGCCCAGCCTGG < 41bp 1 0.109570422897883 1 0.0671021938323975 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286596 chr1:120286589 nonsynonymous SNV 0.999 1 14 hm5C_associated_SNPs_42632 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286589 120286589 1 + G A UCEC 120286597 + 120286577 120286617 41 TGGCACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGA TGGCACGTCATGAGCATCTCCTCCTTGCTGCCCAGCCTGGA < 41bp 1 0.472436851440958 1 0.228120416402817 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286597 chr1:120286589 nonsynonymous SNV 0.999 1 13 hm5C_associated_SNPs_42633 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr1 120286589 120286589 1 + G A UCEC 120286600 + 120286580 120286620 41 CACGTCATGGGCATCTCCTCCTTGCTGCCCAGCCTGGAAGC CACGTCATGAGCATCTCCTCCTTGCTGCCCAGCCTGGAAGC < 41bp 1 0.306410307448295 1 0.220518678426743 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286600 chr1:120286589 nonsynonymous SNV 0.999 1 10 hm5C_associated_SNPs_42634 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:120286540-120286603
64251 chr22 37425550 37425550 1 + C T UCEC 37425537 + 37425517 37425557 41 GAGGATGTCATCTCAGAGGGCCGGGGGAAGACCCACTGAAG GAGGATGTCATCTCAGAGGGCCGGGGGAAGACCTACTGAAG < 41bp 1 0.623462522833759 1 0.845639884471893 experiment 0.753074954332483 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425537 chr22:37425550 nonsynonymous SNV 0.561 0 34 hm5C_associated_SNPs_42635 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37425520-37425580
64251 chr22 37425550 37425550 1 + C T UCEC 37425538 + 37425518 37425558 41 AGGATGTCATCTCAGAGGGCCGGGGGAAGACCCACTGAAGC AGGATGTCATCTCAGAGGGCCGGGGGAAGACCTACTGAAGC < 41bp 1 0.757954813086127 1 0.765859365463257 experiment 0.484090373827747 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MPST ENSG00000128309 CDS Human protein_coding chr22:37425538 chr22:37425550 nonsynonymous SNV 0.561 0 33 hm5C_associated_SNPs_42636 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37425520-37425580
64251 chr15 99491893 99491893 1 + G T UCEC 99491873 + 99491853 99491893 41 ACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATG ACCAGGGCTTGTCCAACGAGCAAGTCCTTCGCTTCGTCATT < 41bp 1 0.216212172345475 1 0.193023979663849 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient IGF1R ENSG00000140443 CDS Human protein_coding chr15:99491873 chr15:99491893 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_42637 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99491880-99491900
64251 chr15 99491893 99491893 1 + G T UCEC 99491899 + 99491879 99491919 41 CTTCGCTTCGTCATGGAGGGCGGCCTTCTGGACAAGCCAGA CTTCGCTTCGTCATTGAGGGCGGCCTTCTGGACAAGCCAGA < 41bp 1 0.175150622225544 1 0.172218233346939 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99491899 chr15:99491893 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_42638 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:99491880-99491900
64251 chr13 28752064 28752064 1 + A T UCEC 28752051 + 28752031 28752071 41 TTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAA TTTAATGACTTTGGTGCCCTCAACATCTCTCAGTGACGAAA < 41bp 1 0.616624680734577 1 0.244082778692245 experiment 0.766750638530845 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752051 chr13:28752064 stopgain 1.000 1 34 hm5C_associated_SNPs_42639 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752064 28752064 1 + A T UCEC 28752054 + 28752034 28752074 41 AATGACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGT AATGACTTTGGTGCCCTCAACATCTCTCAGTGACGAAAGGT < 41bp 1 0.0990036165996404 1 0.194623470306396 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752054 chr13:28752064 stopgain 1.000 1 31 hm5C_associated_SNPs_42640 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752064 28752064 1 + A T UCEC 28752057 + 28752037 28752077 41 GACTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGG GACTTTGGTGCCCTCAACATCTCTCAGTGACGAAAGGTAGG < 41bp 1 0.124551478202074 1 0.120750308036804 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752057 chr13:28752064 stopgain 1.000 1 28 hm5C_associated_SNPs_42641 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752064 28752064 1 + A T UCEC 28752059 + 28752039 28752079 41 CTTTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTG CTTTGGTGCCCTCAACATCTCTCAGTGACGAAAGGTAGGTG < 41bp 1 0.537163135307791 1 0.186867296695709 experiment 0.925673729384418 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752059 chr13:28752064 stopgain 1.000 1 26 hm5C_associated_SNPs_42642 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr13 28752064 28752064 1 + A T UCEC 28752061 + 28752041 28752081 41 TTGGTGCCCTCAACATCTCTCAGAGACGAAAGGTAGGTGAA TTGGTGCCCTCAACATCTCTCAGTGACGAAAGGTAGGTGAA < 41bp 1 0.326107102824074 1 0.622917652130127 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752061 chr13:28752064 stopgain 1.000 1 24 hm5C_associated_SNPs_42643 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:28752062-28752085
64251 chr1 155288063 155288063 1 + T C UCEC 155288044 + 155288024 155288064 41 TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTG TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCCG < 41bp 1 0.248578239314483 1 0.304238379001617 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155288044 chr1:155288063 nonsynonymous SNV 0.995 2 40 hm5C_associated_SNPs_42644 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155288026-155288083
64251 chr17 2266378 2266378 1 + C T UCEC 2266362 + 2266342 2266382 41 CCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGG CCCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCTGGGG < 41bp 1 0.123949609612978 1 0.367151170969009 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266362 chr17:2266378 nonsynonymous SNV 0.975 2 37 hm5C_associated_SNPs_42645 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2266373-2266401
64251 chr17 2266378 2266378 1 + C T UCEC 2266363 + 2266343 2266383 41 CCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCCGGGGT CCTCTGCTGATGAGCTGGTCCAGCGGCACCGCATCTGGGGT < 41bp 1 0.452764756443218 1 0.751694858074188 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266363 chr17:2266378 nonsynonymous SNV 0.975 2 36 hm5C_associated_SNPs_42646 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2266373-2266401
64251 chr5 131607115 131607115 1 + G A UCEC 131607104 + 131607084 131607124 41 GAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG GAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGACTCCTTCCG < 41bp 1 0.63066572255302 1 0.314585030078888 experiment 0.738668554893959 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607104 chr5:131607115 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_42647 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:131607114-131607142
64251 chr16 5123003 5123003 1 + G A UCEC 5122983 + 5122963 5123003 41 CATGATGAGCTCTTGCAGAACAACAGAATTCAGATTGTGGG CATGATGAGCTCTTGCAGAACAACAGAATTCAGATTGTGGA < 41bp 1 0.483980563515776 1 0.188659489154816 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5122983 chr16:5123003 nonsynonymous SNV 0.022 0 41 hm5C_associated_SNPs_42648 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:5122995-5123018
64251 chr16 5123003 5123003 1 + G A UCEC 5123009 + 5122989 5123029 41 AATTCAGATTGTGGGGTTGACAGAACTTCAGAGTCTTGCAG AATTCAGATTGTGGAGTTGACAGAACTTCAGAGTCTTGCAG < 41bp 1 0.710511142672574 1 0.188962310552597 experiment 0.578977714654853 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5123009 chr16:5123003 nonsynonymous SNV 0.022 0 15 hm5C_associated_SNPs_42649 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:5122995-5123018
64251 chr6 18213962 18213962 1 + A G UCEC 18213957 + 18213937 18213977 41 TGACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAG TGACTTTTTTGGTCACGTTCCTCCCGGTGCCAGCAAGCGAG < 41bp 1 0.522763130392575 1 0.303245306015015 experiment 0.954473739214851 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213957 chr6:18213962 nonsynonymous SNV 0.995 2 26 hm5C_associated_SNPs_42650 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr6 18213962 18213962 1 + A G UCEC 18213959 + 18213939 18213979 41 ACTTTTTTGGTCACGTTCCTCCCAGTGCCAGCAAGCGAGGG ACTTTTTTGGTCACGTTCCTCCCGGTGCCAGCAAGCGAGGG < 41bp 1 0.720020489111761 1 0.829145014286041 experiment 0.559959021776478 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1B ENSG00000165097 CDS Human protein_coding chr6:18213959 chr6:18213962 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_42651 0 0 1 BUD13 POSTAR2 ENCODE chr6:18213886-18213977
64251 chr7 44098981 44098981 1 + G A UCEC 44098968 + 44098948 44098988 41 TGCAGGCAAGCTGAGGAGCCCCTTCCTGCAGAAGCAGCTCA TGCAGGCAAGCTGAGGAGCCCCTTCCTGCAGAAACAGCTCA < 41bp 1 0.0168717739369199 1 0.0306969285011292 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44098968 chr7:44098981 synonymous SNV . 0 34 hm5C_associated_SNPs_42652 0 0 2 BUD13 POSTAR2 ENCODE chr7:44098947-44098991
64251 chr6 87865419 87865419 1 + G A UCEC 87865437 + 87865417 87865457 41 GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACT GCAGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACT < 41bp 1 0.458489409397047 1 0.23932158946991 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87865437 chr6:87865419 nonsynonymous SNV 0.991 0 3 hm5C_associated_SNPs_42653 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:87865408-87865419
64251 chr12 132589441 132589441 1 + C T UCEC 132589422 + 132589402 132589442 41 GCCCCTGGGCTTCGAGAGGACGCCCGGCGTGCTGCTCCCCG GCCCCTGGGCTTCGAGAGGACGCCCGGCGTGCTGCTCCCTG < 41bp 1 0.550990060482583 1 0.086250364780426 experiment 0.898019879034834 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EP400NL ENSG00000185684 CDS Human protein_coding chr12:132589422 chr12:132589441 synonymous SNV . 0 40 hm5C_associated_SNPs_42655 0 0 1 RBM15 POSTAR2 ENCODE chr12:132589380-132589450
64251 chr21 47983777 47983777 1 + C T UCEC 47983797 + 47983777 47983817 41 CCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG TCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG < 41bp 1 0.325740068748677 1 0.256418168544769 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47983797 chr21:47983777 nonsynonymous SNV 0.771 4 1 hm5C_associated_SNPs_42657 0 0 4 BUD13 POSTAR2 ENCODE chr21:47983769-47983809
64251 chr17 4859436 4859436 1 + G A UCEC 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCGGTGACCGAATCGATCCAAGCGTGAG < 41bp 1 0.487808036927284 1 0.282024621963501 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859436 synonymous SNV . 0 34 hm5C_associated_SNPs_42659 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859436 4859436 1 + G A UCEC 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCGGTGACCGAATCGATCCAAGCGTGAGT < 41bp 1 0.372831753743664 1 0.63074791431427 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859436 synonymous SNV . 0 33 hm5C_associated_SNPs_42660 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr11 65269959 65269959 1 + T C UCEC 65269963 + 65269943 65269983 41 AAACAAGATGTTAAGGTATGCTTCAAAAATTTTGTAAATTG AAACAAGATGTTAAGGCATGCTTCAAAAATTTTGTAAATTG < 41bp 1 0.209422386771783 1 0.257199794054031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269963 chr11:65269959 . . 0 17 hm5C_associated_SNPs_42667 0 0 58 PTBP1 POSTAR2 GSE19323,GSM480478 chr11:65269900-65269960
64251 chr15 57526293 57526293 1 + G T UCEC 57526295 + 57526275 57526315 41 AGGTGATGCACTTGGAAAGGCTTTGGCATCTGTGAGTATTG AGGTGATGCACTTGGAAATGCTTTGGCATCTGTGAGTATTG < 41bp 1 0.140352521885832 1 0.026357889175415 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57526295 chr15:57526293 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_42672 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:57526268-57526304
64251 chr8 145735854 145735854 1 + G A UCEC 145735855 + 145735835 145735875 41 GTGGTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTT GTGGTCTGCTCCATCGCTGACTCCTCCCTGGGTGGGACCTT < 41bp 1 0.280996852039125 1 0.201964527368546 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735855 chr8:145735854 nonsynonymous SNV 0.584 5 20 hm5C_associated_SNPs_42673 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr8 145735854 145735854 1 + G A UCEC 145735858 + 145735838 145735878 41 GTCTGCTCCATCGCTGGCTCCTCCCTGGGTGGGACCTTGCT GTCTGCTCCATCGCTGACTCCTCCCTGGGTGGGACCTTGCT < 41bp 1 0.223769005511357 1 0.285923540592194 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735858 chr8:145735854 nonsynonymous SNV 0.584 5 17 hm5C_associated_SNPs_42674 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr8:145735835-145735868
64251 chr8 145150812 145150812 1 + C T UCEC 145150830 + 145150810 145150850 41 GGCAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG GGTAGGGGGTGCGGGGCTGGCCATGGCTCTGCATTCGGCTG < 41bp 1 0.569554340769518 1 0.468362718820572 experiment 0.860891318460963 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150830 chr8:145150812 nonsynonymous SNV 0.983 1 3 hm5C_associated_SNPs_42675 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145150800-145150824
64251 chr7 106768717 106768717 1 + C T UCEC 106768707 + 106768687 106768727 41 AATAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGTTTAA AATAGGTTGCAAGAGGCTTGCAAAGACATCTTGCTGTTTAA < 41bp 1 0.441552884877782 1 0.529642581939697 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106768707 chr7:106768717 synonymous SNV . 0 31 hm5C_associated_SNPs_42676 0 0 1 LIN28B POSTAR2 ENCODE chr7:106768659-106768724
64251 chr1 223943216 223943216 1 + G T UCEC 223943200 + 223943180 223943220 41 AGACACATTCTGGATGAACCCTCAGTACCTGATCAAGCTGG AGACACATTCTGGATGAACCCTCAGTACCTGATCAATCTGG < 41bp 1 0.624191786778362 1 0.417696118354797 experiment 0.751616426443276 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943200 chr1:223943216 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_42677 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chr1 223943216 223943216 1 + G T UCEC 223943207 + 223943187 223943227 41 TTCTGGATGAACCCTCAGTACCTGATCAAGCTGGAGGAGGA TTCTGGATGAACCCTCAGTACCTGATCAATCTGGAGGAGGA < 41bp 1 0.363602501205921 1 0.0291604697704315 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943207 chr1:223943216 nonsynonymous SNV 1.000 2 30 hm5C_associated_SNPs_42678 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:223943200-223943220
64251 chr5 71648504 71648504 1 + C T UCEC 71648516 + 71648496 71648536 41 TGGAAAACCTGATAAAGACTCTAAAAAATGCTGCAGAAGGA TGGAAAACTTGATAAAGACTCTAAAAAATGCTGCAGAAGGA < 41bp 1 0.453778085251046 1 0.641235888004303 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71648516 chr5:71648504 synonymous SNV . 0 9 hm5C_associated_SNPs_42679 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:71648500-71648520
64251 chr1 10239573 10239573 1 + C T UCEC 10239562 + 10239542 10239582 41 ATCATCCTGCGGCACCTGCTCAACTCCCCCACGGACCCCTT ATCATCCTGCGGCACCTGCTCAACTCCCCCATGGACCCCTT < 41bp 1 0.486782551616694 1 0.634780168533325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10239562 chr1:10239573 nonsynonymous SNV 0.995 4 32 hm5C_associated_SNPs_42680 0 0 1 YBX3 POSTAR2 ENCODE chr1:10239534-10239589
64251 chr15 41192199 41192199 1 + G A UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACGTGCAACGGGAGACCCGAGATGTCTGGCGCACCTA < 41bp 1 0.409093398508628 1 0.49744063615799 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192199 nonsynonymous SNV 0.996 0 19 hm5C_associated_SNPs_42682 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41192199-41192231
64251 chr11 93412659 93412659 1 + C T UCEC 93412674 + 93412654 93412694 41 TGGAACGGTTTGAAAAGGCACATGTACGGGGATTCCAAGCA TGGAATGGTTTGAAAAGGCACATGTACGGGGATTCCAAGCA < 41bp 1 0.202584432392026 1 0.0708856880664825 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP295 ENSG00000166004 CDS Human protein_coding chr11:93412674 chr11:93412659 nonsynonymous SNV 0.983 2 6 hm5C_associated_SNPs_42683 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:93412600-93412680
64251 chr19 54649743 54649743 1 + C T UCEC 54649752 + 54649732 54649772 41 ACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTG ACCACCTCCAGTTCTCCCATCCCGCCCAGCCCAGCCAACTG < 41bp 1 0.192379898782454 1 0.414322346448898 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54649752 chr19:54649743 synonymous SNV . 0 12 hm5C_associated_SNPs_42684 0 0 2 GRWD1 POSTAR2 ENCODE chr19:54649712-54649758
64251 chr6 32944236 32944236 1 + G A UCEC 32944227 + 32944207 32944247 41 TTACTGCAGCTCCTCCAGCCCAGCCCCTTGCCAAGGTATGA TTACTGCAGCTCCTCCAGCCCAGCCCCTTACCAAGGTATGA < 41bp 1 0.297550665119566 1 0.152070939540863 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944227 chr6:32944236 nonsynonymous SNV 1.000 0 30 hm5C_associated_SNPs_42687 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:32944169-32944241
64251 chr12 70704743 70704743 1 + C T UCEC 70704725 + 70704705 70704745 41 AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGATGA < 41bp 1 0.701786812933145 1 0.425056368112564 experiment 0.596426374133709 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70704725 chr12:70704743 synonymous SNV . 0 39 hm5C_associated_SNPs_42688 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:70704740-70704760
64251 chr12 98995270 98995270 1 + A G UCEC 98995269 + 98995249 98995289 41 CCCTCCTCCACCCGAGATGCCAGAGTCTCTGAAGAAGAAGC CCCTCCTCCACCCGAGATGCCGGAGTCTCTGAAGAAGAAGC < 41bp 1 0.613111201118143 1 0.465520888566971 experiment 0.773777597763714 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995269 chr12:98995270 synonymous SNV . 0 22 hm5C_associated_SNPs_42690 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr16 2816049 2816049 1 + C T UCEC 2816031 + 2816011 2816051 41 CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGCCG CAGGAAAGTTCCCGGACCTCCTCTCGACGCCGAAGAGGTCG < 41bp 1 0.116903981534268 1 0.30153352022171 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816031 chr16:2816049 synonymous SNV . 0 39 hm5C_associated_SNPs_42691 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816049 2816049 1 + C T UCEC 2816050 + 2816030 2816070 41 CCTCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACC CCTCTCGACGCCGAAGAGGTCGCTCTCGGACACCCCCAACC < 41bp 1 0.22700524723557 1 0.105241149663925 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816050 chr16:2816049 synonymous SNV . 0 20 hm5C_associated_SNPs_42692 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr16 2816049 2816049 1 + C T UCEC 2816052 + 2816032 2816072 41 TCTCGACGCCGAAGAGGCCGCTCTCGGACACCCCCAACCAG TCTCGACGCCGAAGAGGTCGCTCTCGGACACCCCCAACCAG < 41bp 1 0.269001123112645 1 0.159784346818924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816052 chr16:2816049 synonymous SNV . 0 18 hm5C_associated_SNPs_42693 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816040-2816060
64251 chr6 44219189 44219189 1 + G A UCEC 44219187 + 44219167 44219207 41 GTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCCCGA GTGTGGTTGACTCTGAGGATCTACCCCTGAACATCTCCCGA < 41bp 1 0.254944090178983 1 0.0876008570194244 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219187 chr6:44219189 synonymous SNV . 0 23 hm5C_associated_SNPs_42694 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:44219154-44219192
64251 chr19 12902703 12902703 1 + G A UCEC 12902712 + 12902692 12902732 41 AACCGAGCCTGGCGGTCAACCTGGCCGACCCCTACCGGAGT AACCGAGCCTGACGGTCAACCTGGCCGACCCCTACCGGAGT < 41bp 1 0.564617020930882 1 0.596655488014221 experiment 0.870765958138235 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control JUNB ENSG00000171223 CDS Human protein_coding chr19:12902712 chr19:12902703 nonsynonymous SNV 0.998 0 12 hm5C_associated_SNPs_42695 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:12902641-12902744
64251 chr11 93412692 93412692 1 + G A UCEC 93412674 + 93412654 93412694 41 TGGAACGGTTTGAAAAGGCACATGTACGGGGATTCCAAGCA TGGAACGGTTTGAAAAGGCACATGTACGGGGATTCCAAACA < 41bp 1 0.181918148362586 1 0.0500983893871307 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CEP295 ENSG00000166004 CDS Human protein_coding chr11:93412674 chr11:93412692 nonsynonymous SNV 0.994 4 39 hm5C_associated_SNPs_42696 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:93412671-93412700
64251 chr19 48259045 48259045 1 + G A UCEC 48259063 + 48259043 48259083 41 GAGCTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC GAACTCGGAGCTGACAGACTCGCTCAGGACCCTGAAGGTGC < 41bp 1 0.243579163925808 1 0.0310888588428497 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259063 chr19:48259045 nonsynonymous SNV 0.905 4 3 hm5C_associated_SNPs_42697 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48259038-48259071
64251 chr6 31516054 31516054 1 + G T UCEC 31516048 + 31516028 31516068 41 CCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGAT CCCAGGCCCTCCTCCAGCGACACCCATGCCTCGATGTAGAT < 41bp 1 0.337811034865726 1 0.0393623113632202 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFKBIL1 ENSG00000204498;ENSG00000213760 CDS Human other chr6:31516048 chr6:31516054 nonsynonymous SNV 0.998 3 27 hm5C_associated_SNPs_42699 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:31516033-31516060
64251 chr22 42301553 42301553 1 + G A UCEC 42301538 + 42301518 42301558 41 TCCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGC TCCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTACTGGC < 41bp 1 0.181230797302421 1 0.272884905338287 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301538 chr22:42301553 synonymous SNV . 0 36 hm5C_associated_SNPs_42700 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301553 42301553 1 + G A UCEC 42301539 + 42301519 42301559 41 CCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCC CCTTCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTACTGGCC < 41bp 1 0.533951149395273 1 0.626239717006683 experiment 0.932097701209454 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301539 chr22:42301553 synonymous SNV . 0 35 hm5C_associated_SNPs_42701 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr22 42301553 42301553 1 + G A UCEC 42301542 + 42301522 42301562 41 TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTACTGGCCGAA < 41bp 1 0.656826329061327 1 0.800466060638428 experiment 0.686347341877346 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301542 chr22:42301553 synonymous SNV . 0 32 hm5C_associated_SNPs_42702 0 0 5 METAP2 POSTAR2 ENCODE chr22:42301508-42301573
64251 chr19 18543843 18543843 1 + G A UCEC 18543840 + 18543820 18543860 41 GAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTG GAACCCCATCGGGCAGGGCGCCGACAGGGCTAATGTGAGTG < 41bp 1 0.0646960333534908 1 0.113160818815231 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543840 chr19:18543843 nonsynonymous SNV 0.760 0 24 hm5C_associated_SNPs_42705 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr19 18543843 18543843 1 + G A UCEC 18543841 + 18543821 18543861 41 AACCCCATCGGGCAGGGCGCCGGCAGGGCTAATGTGAGTGG AACCCCATCGGGCAGGGCGCCGACAGGGCTAATGTGAGTGG < 41bp 1 0.542660118254472 1 0.4344202876091 experiment 0.914679763491056 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SSBP4 ENSG00000130511 CDS Human protein_coding chr19:18543841 chr19:18543843 nonsynonymous SNV 0.760 0 23 hm5C_associated_SNPs_42706 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18543814-18543851
64251 chr7 98497059 98497059 1 + G A UCEC 98497067 + 98497047 98497087 41 TTCCATCATTCCGAGGGGATCACTTTCTCTGAAAGTGTTGG TTCCATCATTCCAAGGGGATCACTTTCTCTGAAAGTGTTGG < 41bp 1 0.0239924846430289 1 0.121159315109253 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98497067 chr7:98497059 synonymous SNV . 0 13 hm5C_associated_SNPs_42707 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98497024-98497062
64251 chr1 114514526 114514526 1 + C T UCEC 114514546 + 114514526 114514566 41 CGAGCTCAACGCGGGGGGACCAGTGCAGCACAACCACTCAA TGAGCTCAACGCGGGGGGACCAGTGCAGCACAACCACTCAA < 41bp 1 0.564483461276261 1 0.669021368026733 experiment 0.871033077447479 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114514546 chr1:114514526 stopgain 0.920 1 1 hm5C_associated_SNPs_42708 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:114514494-114514532
64251 chr15 42105230 42105230 1 + C T UCEC 42105224 + 42105204 42105244 41 GGAAAAAAGGCGGACAGTACCTTCTGCATCACGTCCTCAGG GGAAAAAAGGCGGACAGTACCTTCTGTATCACGTCCTCAGG < 41bp 1 0.343948114877103 1 0.104921400547028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42105224 chr15:42105230 synonymous SNV . 0 27 hm5C_associated_SNPs_42710 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:42105229-42105257
64251 chr18 55996262 55996262 1 + A G UCEC 55996248 + 55996228 55996268 41 GACGTGTCCTCGGAGTCGGACAATAACATCAGACAGATCAA GACGTGTCCTCGGAGTCGGACAATAACATCAGACGGATCAA < 41bp 1 0.312304421160516 1 0.222743958234787 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:55996248 chr18:55996262 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_42711 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:55996235-55996268
64251 chr7 102109433 102109433 1 + C T UCEC 102109445 + 102109425 102109465 41 GGCTTCTGCTGCGGGGTCATCCGAGCCCACAAGAAGGCCAT GGCTTCTGTTGCGGGGTCATCCGAGCCCACAAGAAGGCCAT < 41bp 1 0.414610373426263 1 0.74229884147644 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102109445 chr7:102109433 synonymous SNV . 0 9 hm5C_associated_SNPs_42713 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:102109432-102109457
64251 chr2 38908574 38908574 1 + T C UCEC 38908580 + 38908560 38908600 41 AGAGCACAAGCCAGTCAGGCCACACCAGTCAACCTGACCAA AGAGCACAAGCCAGCCAGGCCACACCAGTCAACCTGACCAA < 41bp 1 0.256277042715408 1 0.205931067466736 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GALM ENSG00000143891 CDS Human protein_coding chr2:38908580 chr2:38908574 synonymous SNV . 0 15 hm5C_associated_SNPs_42722 0 0 2 YBX3 POSTAR2 ENCODE chr2:38908560-38908584
64251 chr12 989995 989995 1 + C T UCEC 989989 + 989969 990009 41 ATTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG ATTCTACAGTCCTATCCCCTCCCATGTCGACAGAAGTACTG < 41bp 1 0.153798211031764 1 0.129124015569687 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:989989 chr12:989995 nonsynonymous SNV 0.997 1 27 hm5C_associated_SNPs_42723 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:989977-990008
64251 chr18 77802139 77802139 1 + C A UCEC 77802159 + 77802139 77802179 41 CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT ATTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT < 41bp 1 0.534809326457109 1 0.181409507989883 experiment 0.930381347085782 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBFA ENSG00000101546 CDS Human protein_coding chr18:77802159 chr18:77802139 nonsynonymous SNV 0.957 0 1 hm5C_associated_SNPs_42724 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:77802058-77802141
64251 chr17 37360389 37360389 1 + T C UCEC 37360369 + 37360349 37360389 41 AAGGTGAAGGGGAATGTGTTCAAAAACAAGCGGATTCTCAT AAGGTGAAGGGGAATGTGTTCAAAAACAAGCGGATTCTCAC < 41bp 1 0.68788862015468 1 0.679356098175049 experiment 0.624222759690639 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360369 chr17:37360389 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_42726 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:37360348-37360405
64251 chr17 45656843 45656843 1 + G T UCEC 45656840 + 45656820 45656860 41 AAGTAAATATACTACCCCTTCTGGAGAGGTGCGCTATGCTG AAGTAAATATACTACCCCTTCTGTAGAGGTGCGCTATGCTG < 41bp 1 0.556929844043945 1 0.444603621959686 experiment 0.886140311912111 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45656840 chr17:45656843 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_42727 0 0 4 EIF3H POSTAR2 ENCODE chr17:45656795-45656878
64251 chr17 78078776 78078776 1 + C T UCEC 78078760 + 78078740 78078780 41 GGAGCCCAGATGGGGCAGCCCTGGTGCTTCTTCCCACCCAG GGAGCCCAGATGGGGCAGCCCTGGTGCTTCTTCCCATCCAG < 41bp 1 0.704196336334374 1 0.328199803829193 experiment 0.591607327331252 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78078760 chr17:78078776 nonsynonymous SNV 0.901 1 37 hm5C_associated_SNPs_42728 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:78078748-78078780
64251 chr11 64128969 64128969 1 + C T UCEC 64128952 + 64128932 64128972 41 CCCTCCCAGAAAGAGCGGACCTTCTCCTTCTGTGGCACCAT CCCTCCCAGAAAGAGCGGACCTTCTCCTTCTGTGGCATCAT < 41bp 1 0.0413329899989519 1 0.0518414974212646 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128952 chr11:64128969 nonsynonymous SNV 0.996 4 38 hm5C_associated_SNPs_42729 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:64128951-64128989
64251 chr3 100467130 100467130 1 + C A UCEC 100467138 + 100467118 100467158 41 CCACAGCAGTACCAGGCGAGCAATTATCCTGCACAAACTTA CCACAGCAGTACAAGGCGAGCAATTATCCTGCACAAACTTA < 41bp 1 0.155570192358537 1 0.215494364500046 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TFG ENSG00000114354 CDS Human protein_coding chr3:100467138 chr3:100467130 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_42730 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr3:100467112-100467145
64251 chr7 12269412 12269412 1 + C T UCEC 12269401 + 12269381 12269421 41 AAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATT AAACAGTTATTGGAAAGGCACGCTTAAACAATATAACCATT < 41bp 1 0.230575748458995 1 0.0583687126636505 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM106B ENSG00000106460 CDS Human protein_coding chr7:12269401 chr7:12269412 synonymous SNV . 0 32 hm5C_associated_SNPs_42732 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:12269405-12269441
64251 chrX 48457774 48457774 1 + C T UCEC 48457763 + 48457743 48457783 41 CTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACC CTTTGAGGATGATCCTCGGGCCCTGGGGGCCTGTGGGCACC < 41bp 1 0.183999760216503 1 0.0892339944839478 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457763 chrX:48457774 nonsynonymous SNV 0.997 2 32 hm5C_associated_SNPs_42734 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457774 48457774 1 + C T UCEC 48457772 + 48457752 48457792 41 TGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTG TGATCCTCGGGCCCTGGGGGCCTGTGGGCACCGTCGTTCTG < 41bp 1 0.136239091187303 1 0.053396999835968 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457772 chrX:48457774 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_42735 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chrX 48457774 48457774 1 + C T UCEC 48457773 + 48457753 48457793 41 GATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGT GATCCTCGGGCCCTGGGGGCCTGTGGGCACCGTCGTTCTGT < 41bp 1 0.54012690473272 1 0.385330080986023 experiment 0.919746190534561 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457773 chrX:48457774 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_42736 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:48457760-48457780
64251 chr14 24779943 24779943 1 + G A UCEC 24779945 + 24779925 24779965 41 TCGCGGGCCACAGGCACAGCCTTCCTGCTGCTGGCGGCGCT TCGCGGGCCACAGGCACAACCTTCCTGCTGCTGGCGGCGCT < 41bp 1 0.238517310686816 1 0.44155615568161 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LTB4R2 ENSG00000213906;ENSG00000272658 CDS Human other chr14:24779945 chr14:24779943 nonsynonymous SNV 0.511 0 19 hm5C_associated_SNPs_42738 0 0 1 PPIG POSTAR2 ENCODE chr14:24779930-24779994
64251 chr4 6642847 6642847 1 + C T UCEC 6642862 + 6642842 6642882 41 CCGGGCGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGA CCGGGTGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGA < 41bp 1 0.746372038603341 1 0.511807143688202 experiment 0.507255922793318 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642862 chr4:6642847 synonymous SNV . 0 6 hm5C_associated_SNPs_42739 0 0 4 RPS3 POSTAR2 ENCODE chr4:6642818-6642875
64251 chr4 6642847 6642847 1 + C T UCEC 6642867 + 6642847 6642887 41 CGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGG TGACGCGGCCGAGGGCCGGGCGGCCAAGAGGTGCGAGAAGG < 41bp 1 0.614604911978707 1 0.526133835315704 experiment 0.770790176042585 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642867 chr4:6642847 synonymous SNV . 0 1 hm5C_associated_SNPs_42740 0 0 4 RPS3 POSTAR2 ENCODE chr4:6642818-6642875
64251 chr11 33564283 33564283 1 + G A UCEC 33564290 + 33564270 33564310 41 GCAGATCAAAGCTGGGGTGCCTGGAAGAGTGCACAATGGGG GCAGATCAAAGCTAGGGTGCCTGGAAGAGTGCACAATGGGG < 41bp 1 0.637633750959591 1 0.439821481704712 experiment 0.724732498080817 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIAA1549L ENSG00000110427 CDS Human protein_coding chr11:33564290 chr11:33564283 nonsynonymous SNV 0.000 0 14 hm5C_associated_SNPs_42742 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:33564259-33564285
64251 chr1 9670745 9670745 1 + G T UCEC 9670727 + 9670707 9670747 41 GGACAGAAGCTGCTGCTGTTCCCGTCACCCCCTGGAGAGGC GGACAGAAGCTGCTGCTGTTCCCGTCACCCCCTGGAGATGC < 41bp 1 0.434319927046824 1 0.0790221393108368 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9670727 chr1:9670745 nonsynonymous SNV 0.017 1 39 hm5C_associated_SNPs_42743 0 0 1 IGF2BP2 POSTAR2 ENCODE chr1:9670673-9670773
64251 chr8 92090667 92090667 1 + G T UCEC 92090658 + 92090638 92090678 41 ATTGAAAACTTAACAGGAGCCAGACATATGGAAAGTGAGAA ATTGAAAACTTAACAGGAGCCAGACATATTGAAAGTGAGAA < 41bp 1 0.451240989924349 1 0.29829066991806 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92090658 chr8:92090667 nonsynonymous SNV 0.771 0 30 hm5C_associated_SNPs_42744 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:92090663-92090698
64251 chr17 27064862 27064862 1 + A G UCEC 27064861 + 27064841 27064881 41 CCCCCGGGGACCTGTGAGGCCAGCCATCCCACCACCACTGT CCCCCGGGGACCTGTGAGGCCGGCCATCCCACCACCACTGT < 41bp 1 0.452130424665171 1 0.145168662071228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064861 chr17:27064862 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_42746 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:27064849-27064880
64251 chr16 2806594 2806594 1 + A G UCEC 2806582 + 2806562 2806602 41 TCGAGCTGCGATGCCTCGAGCTGGAGGAGATGATGGAAGAG TCGAGCTGCGATGCCTCGAGCTGGAGGAGATGGTGGAAGAG < 41bp 1 0.799331491510274 1 0.619839906692505 experiment 0.401337016979453 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806582 chr16:2806594 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_42748 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2806515-2806594
64251 chr8 28906492 28906492 1 + A G UCEC 28906477 + 28906457 28906497 41 TGCTTTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGA TGCTTTTTTCGAAGAAGCAGCAATCCTGGAGAGTCGTGGGA < 41bp 1 0.043075663678899 1 0.133563250303268 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906477 chr8:28906492 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_42749 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr8 28906492 28906492 1 + A G UCEC 28906481 + 28906461 28906501 41 TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCATGGGATAGA TTTTTCGAAGAAGCAGCAATCCTGGAGAGTCGTGGGATAGA < 41bp 1 0.248350022873758 1 0.752850532531738 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906481 chr8:28906492 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_42750 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr8 28906492 28906492 1 + A G UCEC 28906512 + 28906492 28906532 41 ATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT GTGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGT < 41bp 1 0.560465496887329 1 0.454638510942459 experiment 0.879069006225342 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906512 chr8:28906492 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_42751 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr10 43285938 43285938 1 + G A UCEC 43285946 + 43285926 43285966 41 ATTAAAACACAGGTTCTGGACGGAAGTTTACCCGGTACGAA ATTAAAACACAGATTCTGGACGGAAGTTTACCCGGTACGAA < 41bp 1 0.631280632171596 1 0.307745963335037 experiment 0.737438735656808 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43285946 chr10:43285938 synonymous SNV . 0 13 hm5C_associated_SNPs_42752 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43285934-43285952
64251 chr6 27101025 27101025 1 + C A UCEC 27101032 + 27101012 27101052 41 GGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGGCGG GGTGCTGGAGTACATGACCGCCGAGATCCTGGAACTGGCGG < 41bp 1 0.579182569842844 1 0.437135815620422 experiment 0.841634860314312 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101032 chr6:27101025 nonsynonymous SNV 0.916 3 14 hm5C_associated_SNPs_42753 0 0 49 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr17 47115715 47115715 1 + T C UCEC 47115716 + 47115696 47115736 41 AAGCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCC AAGCAGCAGCAAGTGGACACCCCCCTTCGGCTCCTGGTGCC < 41bp 1 0.200025012945309 1 0.193391919136047 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115716 chr17:47115715 nonsynonymous SNV 0.958 1 20 hm5C_associated_SNPs_42755 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr17 47115715 47115715 1 + T C UCEC 47115718 + 47115698 47115738 41 GCAGCAGCAAGTGGACATCCCCCTTCGGCTCCTGGTGCCCA GCAGCAGCAAGTGGACACCCCCCTTCGGCTCCTGGTGCCCA < 41bp 1 0.0488919543533077 1 0.0583628118038177 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47115718 chr17:47115715 nonsynonymous SNV 0.958 1 18 hm5C_associated_SNPs_42756 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47115678-47115743
64251 chr10 51581323 51581323 1 + C T UCEC 51581313 + 51581293 51581333 41 CTGAAGATTCAACTGTCCTGCTCTTTGAAGCTGACACAATT CTGAAGATTCAACTGTCCTGCTCTTTGAAGTTGACACAATT < 41bp 1 0.141815725049467 1 0.0799928307533264 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCOA4 ENSG00000138293 CDS Human other chr10:51581313 chr10:51581323 nonsynonymous SNV . 0 31 hm5C_associated_SNPs_42758 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:51581289-51581355
64251 chrX 17770008 17770008 1 + G A UCEC 17770024 + 17770004 17770044 41 GGTCGGTGGAAGCAGTGGTCCTATTTCTAAAACAAACAGAT GGTCAGTGGAAGCAGTGGTCCTATTTCTAAAACAAACAGAT < 41bp 1 0.273848131042253 1 0.184457838535309 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SCML1 ENSG00000047634 CDS Human protein_coding chrX:17770024 chrX:17770008 synonymous SNV . 0 5 hm5C_associated_SNPs_42759 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17769938-17770023
64251 chr16 597855 597855 1 + C T UCEC 597866 + 597846 597886 41 CTCCAGCCCCGACTTCACCACCTGGTCATGTGCCAAGTGCA CTCCAGCCCTGACTTCACCACCTGGTCATGTGCCAAGTGCA < 41bp 1 0.0644142690496451 1 0.198636829853058 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CAPN15 ENSG00000103326 CDS Human protein_coding chr16:597866 chr16:597855 synonymous SNV . 0 10 hm5C_associated_SNPs_42760 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:597832-597857
64251 chr1 54678320 54678320 1 + C T UCEC 54678323 + 54678303 54678343 41 CCCTGGCTCAGGCCCGGCTCCTCTATGGGGTATGTAGGTGG CCCTGGCTCAGGCCCGGTTCCTCTATGGGGTATGTAGGTGG < 41bp 1 0.747431507846954 1 0.852733254432678 experiment 0.505136984306093 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MRPL37 ENSG00000116221 CDS Human protein_coding chr1:54678323 chr1:54678320 nonsynonymous SNV 0.994 0 18 hm5C_associated_SNPs_42762 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:54678274-54678326
64251 chr7 6631384 6631384 1 + C T UCEC 6631401 + 6631381 6631421 41 CAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT CAGTCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT < 41bp 1 0.152212285520699 1 0.178245723247528 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631401 chr7:6631384 synonymous SNV . 0 4 hm5C_associated_SNPs_42763 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr7 6631384 6631384 1 + C T UCEC 6631402 + 6631382 6631422 41 AGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT AGTCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCTT < 41bp 1 0.479922084495613 1 0.544707953929901 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631402 chr7:6631384 synonymous SNV . 0 3 hm5C_associated_SNPs_42764 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr6 117869595 117869595 1 + T G UCEC 117869589 + 117869569 117869609 41 CCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAAT CCTCAACCAGACGGCCATGACTGCCCGTTTGTGAACACAAT < 41bp 1 0.406615294547322 1 0.346199750900269 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869589 chr6:117869595 nonsynonymous SNV 0.996 2 27 hm5C_associated_SNPs_42765 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:117869538-117869598
64251 chr16 460305 460305 1 + A G UCEC 460313 + 460293 460333 41 TTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAA TTCAAGACCGTGGTGGACATCGATACCAGCGGCACCTTCAA < 41bp 1 0.624116465707557 1 0.413625776767731 experiment 0.751767068584885 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DECR2 ENSG00000242612 CDS Human protein_coding chr16:460313 chr16:460305 nonsynonymous SNV 0.823 0 13 hm5C_associated_SNPs_42766 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:460302-460324
64251 chr11 118369120 118369120 1 + G A UCEC 118369113 + 118369093 118369133 41 ATTCTGCCAAAAGCCAGGAGCCACCGTGGGTTGCTGTCTCA ATTCTGCCAAAAGCCAGGAGCCACCGTAGGTTGCTGTCTCA < 41bp 1 0.0201284418290379 1 0.335254311561584 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2A ENSG00000118058 CDS Human protein_coding chr11:118369113 chr11:118369120 synonymous SNV . 0 28 hm5C_associated_SNPs_42771 0 0 3 EIF3H POSTAR2 ENCODE chr11:118369086-118369138
64251 chr21 45534135 45534135 1 + G A UCEC 45534115 + 45534095 45534135 41 TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAG TCTGTGCTGCACCACTTCCACTTCAAGGGCTCTGTGCACAA < 41bp 1 0.752761575786357 1 0.65299254655838 experiment 0.494476848427287 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45534115 chr21:45534135 nonsynonymous SNV 0.964 1 41 hm5C_associated_SNPs_42772 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45534100-45534136
64251 chr5 36985785 36985785 1 + G T UCEC 36985791 + 36985771 36985811 41 CAGAGCGACATCGAGGGGATCAGTCTAGGGTTCGAAGACCA CAGAGCGACATCGATGGGATCAGTCTAGGGTTCGAAGACCA < 41bp 1 0.132032136568559 1 0.0308621227741241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985791 chr5:36985785 nonsynonymous SNV 0.982 4 15 hm5C_associated_SNPs_42773 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:36985753-36985813
64251 chr9 138378966 138378966 1 + C G UCEC 138378967 + 138378947 138378987 41 CCGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTG CCGCTCTTGGGACAGGGGGGCCAGCCAGGCCAGAGGTGCTG < 41bp 1 0.108060848954757 1 0.125800043344498 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378967 chr9:138378966 synonymous SNV . 0 20 hm5C_associated_SNPs_42774 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr9 138378966 138378966 1 + C G UCEC 138378968 + 138378948 138378988 41 CGCTCTTGGGACAGGGGGCCCAGCCAGGCCAGAGGTGCTGT CGCTCTTGGGACAGGGGGGCCAGCCAGGCCAGAGGTGCTGT < 41bp 1 0.300838205778909 1 0.499384820461273 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378968 chr9:138378966 synonymous SNV . 0 19 hm5C_associated_SNPs_42775 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr19 19308370 19308370 1 + C T UCEC 19308371 + 19308351 19308391 41 CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC CAGACGAGCGCGGCTTCACTCCCCTCATCTGGGCCTCCGCC < 41bp 1 0.35676114647514 1 0.172363787889481 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308371 chr19:19308370 synonymous SNV . 0 20 hm5C_associated_SNPs_42778 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr19 580412 580412 1 + C A UCEC 580394 + 580374 580414 41 TGCAGGGTGGACTCCGACGACCAGTGGGGAGAGTACTCCTG TGCAGGGTGGACTCCGACGACCAGTGGGGAGAGTACTCATG < 41bp 1 0.383445553999633 1 0.145904868841171 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BSG ENSG00000172270 CDS Human protein_coding chr19:580394 chr19:580412 synonymous SNV . 0 39 hm5C_associated_SNPs_42779 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:580380-580440
64251 chr8 23146561 23146561 1 + T A UCEC 23146569 + 23146549 23146589 41 TCTCCAGTCGCCTCCGGTACCTGATCCATAGAACAGCAGAG TCTCCAGTCGCCACCGGTACCTGATCCATAGAACAGCAGAG < 41bp 1 0.326185066368591 1 0.0600094497203827 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23146569 chr8:23146561 nonsynonymous SNV 0.990 2 13 hm5C_associated_SNPs_42780 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23146530-23146563
64251 chr7 102937922 102937922 1 + G A UCEC 102937920 + 102937900 102937940 41 AGCAGAAATGGCGGCTGCGGCGGCTCGAGTGGTGTTGTCAT AGCAGAAATGGCGGCTGCGGCGACTCGAGTGGTGTTGTCAT < 41bp 1 0.546885545852565 1 0.528308510780334 experiment 0.906228908294869 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PMPCB ENSG00000105819 CDS Human protein_coding chr7:102937920 chr7:102937922 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_42781 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:102937900-102937940
64251 chr19 7604912 7604912 1 + C A UCEC 7604931 + 7604911 7604951 41 CCTCTGAAGTGCTTTATATGCTCAAGAACGTCCGGTCAGTG CATCTGAAGTGCTTTATATGCTCAAGAACGTCCGGTCAGTG < 41bp 1 0.637792934601011 1 0.352538824081421 experiment 0.724414130797978 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA6 ENSG00000032444 CDS Human protein_coding chr19:7604931 chr19:7604912 synonymous SNV . 0 2 hm5C_associated_SNPs_42782 0 0 1 SND1 POSTAR2 ENCODE chr19:7604814-7604912
64251 chr22 20128455 20128455 1 + C T UCEC 20128461 + 20128441 20128481 41 CGCCTTTCCTTAGGCCTGAACTCCTGGACCGAGCTGCACCG CGCCTTTCCTTAGGTCTGAACTCCTGGACCGAGCTGCACCG < 41bp 1 0.361504972910689 1 0.874370455741882 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZDHHC8 ENSG00000099904 CDS Human protein_coding chr22:20128461 chr22:20128455 nonsynonymous SNV 0.195 3 15 hm5C_associated_SNPs_42783 0 0 5 DGCR8 POSTAR2 GSE39086,GSM955513 chr22:20128440-20128460
64251 chr2 32773051 32773051 1 + G A UCEC 32773033 + 32773013 32773053 41 GGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGGCTGGA GGGTGGGATGTGGAACAAGCCTTAACTAAGCAAAGGCTAGA < 41bp 1 0.206184248997308 1 0.098798543214798 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773033 chr2:32773051 synonymous SNV . 0 39 hm5C_associated_SNPs_42784 0 0 1 PPIG POSTAR2 ENCODE chr2:32773049-32773076
64251 chr2 32773051 32773051 1 + G A UCEC 32773043 + 32773023 32773063 41 TGGAACAAGCCTTAACTAAGCAAAGGCTGGAAGAGGAACAT TGGAACAAGCCTTAACTAAGCAAAGGCTAGAAGAGGAACAT < 41bp 1 0.175562037434025 1 0.633621037006378 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32773043 chr2:32773051 synonymous SNV . 0 29 hm5C_associated_SNPs_42785 0 0 1 PPIG POSTAR2 ENCODE chr2:32773049-32773076
64251 chr9 104307082 104307082 1 + T C UCEC 104307070 + 104307050 104307090 41 TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCTGAACTCTT TAATCTGATAGTGGAGGAAGCAGTGCAGGAGCCGAACTCTT < 41bp 1 0.321250293386697 1 0.612744390964508 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307070 chr9:104307082 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_42787 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr2 71654022 71654022 1 + C T UCEC 71654019 + 71653999 71654039 41 CAGTGGCTGAAGAACAAGATCTCCTCAAACAGGAACGCTTG CAGTGGCTGAAGAACAAGATCTCTTCAAACAGGAACGCTTG < 41bp 1 0.220342632416261 1 0.30475515127182 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71654019 chr2:71654022 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_42788 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71653923-71654092
64251 chr2 89028811 89028811 1 + C A UCEC 89028799 + 89028779 89028819 41 TTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCCTGCAGTAT TTCCCTGTCCTCCGCAGGCCCGCCAGCTCATCATGCAGTAT < 41bp 1 0.755315944906296 1 0.265694916248322 experiment 0.489368110187409 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPIA ENSG00000153574 CDS Human protein_coding chr2:89028799 chr2:89028811 nonsynonymous SNV 0.998 1 33 hm5C_associated_SNPs_42789 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:89028800-89028820
64251 chr10 43292212 43292212 1 + A T UCEC 43292225 + 43292205 43292245 41 GACGATGACCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC GACGATGTCCTTGAGAGGAGCTCAGCGGAAGAAGGGGAAGC < 41bp 1 0.362925524427924 1 0.279264897108078 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292225 chr10:43292212 nonsynonymous SNV 0.988 4 8 hm5C_associated_SNPs_42790 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chr10:43292175-43292233
64251 chr2 135160678 135160678 1 + G A UCEC 135160666 + 135160646 135160686 41 TACGTGAAAAACCATGGTATCCTCAGTGGACGGGACCTGCA TACGTGAAAAACCATGGTATCCTCAGTGGACGAGACCTGCA < 41bp 1 0.194578467706426 1 0.065963476896286 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135160666 chr2:135160678 synonymous SNV . 0 33 hm5C_associated_SNPs_42791 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:135160659-135160684
64251 chr3 184039158 184039158 1 + T C UCEC 184039162 + 184039142 184039182 41 CCCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCA CCCAGCCTTCGTCGCCCTCTCCGACCCCATCACCATCCCCA < 41bp 1 0.216134008516784 1 0.418859213590622 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039162 chr3:184039158 synonymous SNV . 0 17 hm5C_associated_SNPs_42792 0 0 40 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr3 184039158 184039158 1 + T C UCEC 184039163 + 184039143 184039183 41 CCAGCCTTCGTCGCCTTCTCCGACCCCATCACCATCCCCAG CCAGCCTTCGTCGCCCTCTCCGACCCCATCACCATCCCCAG < 41bp 1 0.385664312300736 1 0.787561893463135 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184039163 chr3:184039158 synonymous SNV . 0 16 hm5C_associated_SNPs_42793 0 0 40 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:184039093-184039169
64251 chr19 46026018 46026018 1 + A G UCEC 46026006 + 46025986 46026026 41 CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGA CCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGGGTGGTCGA < 41bp 1 0.611133460121702 1 0.560025215148926 experiment 0.777733079756596 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026006 chr19:46026018 nonsynonymous SNV 0.475 0 33 hm5C_associated_SNPs_42797 0 0 4 GPKOW POSTAR2 ENCODE chr19:46026008-46026087
64251 chr19 46026018 46026018 1 + A G UCEC 46026007 + 46025987 46026027 41 CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAA CTCAGGGGGGCCCACAGCCCCCAAAGCTGAGGGTGGTCGAA < 41bp 1 0.3814543132882 1 0.306441605091095 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026007 chr19:46026018 nonsynonymous SNV 0.475 0 32 hm5C_associated_SNPs_42798 0 0 4 GPKOW POSTAR2 ENCODE chr19:46026008-46026087
64251 chr19 46026018 46026018 1 + A G UCEC 46026008 + 46025988 46026028 41 TCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCGAAG TCAGGGGGGCCCACAGCCCCCAAAGCTGAGGGTGGTCGAAG < 41bp 1 0.491224616165032 1 0.489049553871155 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46026008 chr19:46026018 nonsynonymous SNV 0.475 0 31 hm5C_associated_SNPs_42799 0 0 4 GPKOW POSTAR2 ENCODE chr19:46026008-46026087
64251 chr19 45797628 45797628 1 + A G UCEC 45797648 + 45797628 45797668 41 ATGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG GTGACCCGCAGAAACACCTACGTTTGCACAGAACGCCCGGG < 41bp 1 0.0516367975656757 1 0.0734494030475616 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45797648 chr19:45797628 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_42800 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:45797607-45797638
64251 chr5 14359526 14359526 1 + G T UCEC 14359530 + 14359510 14359550 41 TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG TCAACCACATTGAGACTGTGCTGCAGCAGCTGGACGAGGCG < 41bp 1 0.410608747056511 1 0.562633275985718 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359530 chr5:14359526 synonymous SNV . 0 17 hm5C_associated_SNPs_42801 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:14359520-14359540
64251 chrX 73043774 73043774 1 - G A UCEC 73043778 - 73043758 73043798 41 AGATAGGAATGAACTATTGGCTTACTGAATGGTGATTACTT AGATAGGAATGAACTATTGGCTTATTGAATGGTGATTACTT < 41bp 1 0.030547359467151 1 0.0333169102668762 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043778 chrX:73043774 . . 0 25 hm5C_associated_SNPs_42803 0 0 73 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr1 949635 949635 1 + G A UCEC 949655 + 949635 949675 41 GCAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCC ACAGCAGCACCTACGAGGTACGGCTGACGCAGACCGTGGCC < 41bp 1 0.636345731581348 1 0.390745639801025 experiment 0.727308536837305 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ISG15 ENSG00000187608 CDS Human protein_coding chr1:949655 chr1:949635 nonsynonymous SNV 0.009 0 1 hm5C_associated_SNPs_42805 0 0 3 RPS3 POSTAR2 ENCODE chr1:949611-949663
64251 chr8 87447722 87447722 1 + G T UCEC 87447738 + 87447718 87447758 41 TTTAGGTGGAAGCTTGCTCACTTCCGTTATTTGTGCCAGGT TTTATGTGGAAGCTTGCTCACTTCCGTTATTTGTGCCAGGT < 41bp 1 0.268272045928197 1 0.0610020458698273 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WWP1 ENSG00000123124 CDS Human protein_coding chr8:87447738 chr8:87447722 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_42806 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:87447709-87447733
64251 chr17 53844737 53844737 1 + G T UCEC 53844740 + 53844720 53844760 41 GTCTTTGGTGTTCTGGAGGACTGCTCACCAACTCTACTGGC GTCTTTGGTGTTCTGGATGACTGCTCACCAACTCTACTGGC < 41bp 1 0.452351196957464 1 0.094639390707016 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53844740 chr17:53844737 nonsynonymous SNV 0.037 0 18 hm5C_associated_SNPs_42807 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:53844734-53844758
64251 chr9 140110225 140110225 1 + C T UCEC 140110226 + 140110206 140110246 41 GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA GTAGCCCCCTTCCGAGCAGTCATCCAGGAGCGTGTGGCCCA < 41bp 1 0.177402562958794 1 0.0554902255535126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110226 chr9:140110225 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_42810 0 0 2 PPIG POSTAR2 ENCODE chr9:140110207-140110234
64251 chr9 140110225 140110225 1 + C T UCEC 140110236 + 140110216 140110256 41 TCCGAGCAGCCATCCAGGAGCGTGTGGCCCAGGGCCAGACT TCCGAGCAGTCATCCAGGAGCGTGTGGCCCAGGGCCAGACT < 41bp 1 0.284578468763411 1 0.136406600475311 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110236 chr9:140110225 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_42811 0 0 2 PPIG POSTAR2 ENCODE chr9:140110207-140110234
64251 chr16 16208691 16208691 1 + G A UCEC 16208711 + 16208691 16208731 41 GTGGACCTGCTGCACAGCATCCTGCGGTCACCCATGAGCTT ATGGACCTGCTGCACAGCATCCTGCGGTCACCCATGAGCTT < 41bp 1 0.1287781187022 1 0.259900987148285 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16208711 chr16:16208691 nonsynonymous SNV 0.003 1 1 hm5C_associated_SNPs_42813 0 0 3 RPS3 POSTAR2 ENCODE chr16:16208641-16208692
64251 chr1 235600761 235600761 1 + G A UCEC 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGAC < 41bp 1 0.594129787726541 1 0.0628799200057983 experiment 0.811740424546918 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600761 nonsynonymous SNV 0.002 0 40 hm5C_associated_SNPs_42814 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235600755-235600789
64251 chr15 91358377 91358377 1 + C T UCEC 91358367 + 91358347 91358387 41 TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTG TAGAAAGATATCTTCCAAAACGAAATCCTCTAGCATCATTG < 41bp 1 0.59881142771078 1 0.0991764664649963 experiment 0.80237714457844 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358367 chr15:91358377 synonymous SNV . 0 31 hm5C_associated_SNPs_42818 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:91358357-91358380
64251 chr6 33411137 33411137 1 + T C UCEC 33411133 + 33411113 33411153 41 GAACCCTCTCTTCCACATGGCTGCTGATGGGCCAGGTCCCC GAACCCTCTCTTCCACATGGCTGCCGATGGGCCAGGTCCCC < 41bp 1 0.150896743592181 1 0.0113314688205719 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411133 chr6:33411137 synonymous SNV . 0 25 hm5C_associated_SNPs_42819 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33411094-33411137
64251 chr14 64628983 64628983 1 + C T UCEC 64628971 + 64628951 64628991 41 ACAACCTGGCAGAGATCCTGCCCCCAGCCCTGCAGGACATA ACAACCTGGCAGAGATCCTGCCCCCAGCCCTGTAGGACATA < 41bp 1 0.0769260820003325 1 0.0436230301856995 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SYNE2 ENSG00000054654 CDS Human protein_coding chr14:64628971 chr14:64628983 stopgain 0.726 0 33 hm5C_associated_SNPs_42820 0 0 1 EIF3H POSTAR2 ENCODE chr14:64628937-64628987
64251 chr12 6638682 6638682 1 + G A UCEC 6638688 + 6638668 6638708 41 CCTTCCTGCAGACAGCTCCTCTCCTACATCACCAAGGACAA CCTTCCTGCAGACAACTCCTCTCCTACATCACCAAGGACAA < 41bp 1 0.284679284389495 1 0.0590895712375641 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6638688 chr12:6638682 synonymous SNV . 0 15 hm5C_associated_SNPs_42821 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:6638680-6638700
64251 chr18 13056665 13056665 1 + A G UCEC 13056650 + 13056630 13056670 41 TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCAT TCCTGTGCCGTCTGTTGGTACAAACTGTGGAATTGGACCAT < 41bp 1 0.120198253212999 1 0.305841505527496 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056650 chr18:13056665 nonsynonymous SNV 0.210 0 36 hm5C_associated_SNPs_42822 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr18 13056665 13056665 1 + A G UCEC 13056654 + 13056634 13056674 41 GTGCCGTCTGTTGGTACAAACTGTGGAATTGAACCATGGGA GTGCCGTCTGTTGGTACAAACTGTGGAATTGGACCATGGGA < 41bp 1 0.319949517148013 1 0.255760014057159 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056654 chr18:13056665 nonsynonymous SNV 0.210 0 32 hm5C_associated_SNPs_42823 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:13056644-13056682
64251 chr19 7585178 7585178 1 + G A UCEC 7585187 + 7585167 7585207 41 TACGCCTGCCCGCACTGCTCCAAGGCCTTCGGCCAGAGCTC TACGCCTGCCCACACTGCTCCAAGGCCTTCGGCCAGAGCTC < 41bp 1 0.584736308592681 1 0.612827479839325 experiment 0.830527382814638 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control ZNF358 ENSG00000198816 CDS Human protein_coding chr19:7585187 chr19:7585178 synonymous SNV . 0 12 hm5C_associated_SNPs_42824 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:7585167-7585187
64251 chr9 19336400 19336400 1 + T C UCEC 19336394 + 19336374 19336414 41 AAAAGACTGTGCAAAGGTCACAGGTCTCCTCAATATCAGGT AAAAGACTGTGCAAAGGTCACAGGTCCCCTCAATATCAGGT < 41bp 1 0.313162210356418 1 0.420017689466476 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336394 chr9:19336400 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_42825 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:19336361-19336439
64251 chr21 34925037 34925037 1 + T C UCEC 34925019 + 34924999 34925039 41 CCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAATGA CCCAACAATGCCACCGTTGCCACCTGAGGAGCCACCAACGA < 41bp 1 0.627391437873319 1 0.388439208269119 experiment 0.745217124253362 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SON ENSG00000159140 CDS Human protein_coding chr21:34925019 chr21:34925037 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_42826 0 0 24 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:34924944-34925072
64251 chr17 4859869 4859869 1 + T C UCEC 4859885 + 4859865 4859905 41 CAGGTGCAAACTGGCTCAGTCTAATGGCTGGGGGGTGATGG CAGGCGCAAACTGGCTCAGTCTAATGGCTGGGGGGTGATGG < 41bp 1 0.362455283022408 1 0.0988220274448395 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859885 chr17:4859869 nonsynonymous SNV 0.915 5 5 hm5C_associated_SNPs_42827 0 0 3 BUD13 POSTAR2 ENCODE chr17:4859820-4859879
64251 chr19 14512336 14512336 1 + C T UCEC 14512320 + 14512300 14512340 41 CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGCCTAA CTTGAAGATATCATGAGGATCCTGGCCAAGAGCCTGTCTAA < 41bp 1 0.237933041017746 1 0.0492123961448669 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512320 chr19:14512336 nonsynonymous SNV 0.003 1 37 hm5C_associated_SNPs_42830 0 0 1 SND1 POSTAR2 ENCODE chr19:14512310-14512376
64251 chr1 27089626 27089626 1 + C T UCEC 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGTCT < 41bp 1 0.613181766061736 1 0.890716910362244 experiment 0.773636467876527 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089626 nonsynonymous SNV 0.882 1 39 hm5C_associated_SNPs_42831 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:27089587-27089634
64251 chr5 61669593 61669593 1 + G A UCEC 61669583 + 61669563 61669603 41 ATAATGCACCATCCACCAAACCAGATTGATGACTTAGAGAC ATAATGCACCATCCACCAAACCAGATTGATAACTTAGAGAC < 41bp 1 0.699749732568047 1 0.38718655705452 experiment 0.600500534863906 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF2A ENSG00000068796 CDS Human protein_coding chr5:61669583 chr5:61669593 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_42832 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:61669564-61669602
64251 chr4 26622291 26622291 1 + T C UCEC 26622308 + 26622288 26622328 41 TGGTATACATGAGGAAAGCACAGGTTGGCTATTGTTCAATT TGGCATACATGAGGAAAGCACAGGTTGGCTATTGTTCAATT < 41bp 1 0.490203259574952 1 0.407135009765625 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26622308 chr4:26622291 nonsynonymous SNV 0.997 0 4 hm5C_associated_SNPs_42834 0 0 1 DDX24 POSTAR2 ENCODE chr4:26622234-26622311
64251 chr3 4859841 4859841 1 + A G UCEC 4859828 + 4859808 4859848 41 AAGAGCACATCAAGGAAGAACACAACATGTGGCACTATCTG AAGAGCACATCAAGGAAGAACACAACATGTGGCGCTATCTG < 41bp 1 0.173657773337733 1 0.305477619171143 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4859828 chr3:4859841 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_42835 0 0 2 ZNF622 POSTAR2 ENCODE chr3:4859765-4859911
64251 chr2 204082003 204082003 1 + T C UCEC 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCGAAAACTTTGGGGATCGAGCAAGCGGCTCAGCCAGA < 41bp 1 0.218974271638519 1 0.386976212263107 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204082003 nonsynonymous SNV 0.997 0 11 hm5C_associated_SNPs_42836 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr1 171756895 171756895 1 + T C UCEC 171756878 + 171756858 171756898 41 TCTGGTTGTACCTTCAGGTCCCCTTTCTGTCTGTGGGTGGG TCTGGTTGTACCTTCAGGTCCCCTTTCTGTCTGTGGGCGGG < 41bp 1 0.081674205820524 1 0.0246005356311798 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171756878 chr1:171756895 synonymous SNV . 0 38 hm5C_associated_SNPs_42837 0 0 3 DDX24 POSTAR2 ENCODE chr1:171756893-171756948
64251 chr17 42636648 42636648 1 + T C UCEC 42636652 + 42636632 42636672 41 CTCATGACGCTCATCGTGGGCATCACGTCGGGCTTCTGGAT CTCATGACGCTCATCGCGGGCATCACGTCGGGCTTCTGGAT < 41bp 1 0.229154716478791 1 0.0801604986190796 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636652 chr17:42636648 nonsynonymous SNV 1.000 5 17 hm5C_associated_SNPs_42838 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42636646-42636684
64251 chr16 11066817 11066817 1 + C A UCEC 11066834 + 11066814 11066854 41 GCACTACATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA GCAATACATCCGAGATAAAACTGCTGTTCCTTACTTCTCCA < 41bp 1 0.385835677465529 1 0.0309991240501404 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11066834 chr16:11066817 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_42839 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:11066817-11066855
64251 chrX 21869664 21869664 1 + A T UCEC 21869650 + 21869630 21869670 41 CCTGGTATAAATTTACCCGTCAATCAACTGACCTATTTCTT CCTGGTATAAATTTACCCGTCAATCAACTGACCTTTTTCTT < 41bp 1 0.0970095674749986 1 0.118871510028839 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21869650 chrX:21869664 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_42841 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:21869640-21869700
64251 chr1 32626293 32626293 1 + T C UCEC 32626288 + 32626268 32626308 41 ACGTCTTGAACTGTTCCATCCTTAATCCTTTGTTAACGTGA ACGTCTTGAACTGTTCCATCCTTAACCCTTTGTTAACGTGA < 41bp 1 0.118413912952105 1 0.593871235847473 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32626288 chr1:32626293 synonymous SNV . 0 26 hm5C_associated_SNPs_42843 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32626227-32626297
64251 chr17 48696112 48696112 1 + C T UCEC 48696108 + 48696088 48696128 41 TTCGTGCTGACGGCCCAGTTCGTGCTAGTCAACGTGGTGAT TTCGTGCTGACGGCCCAGTTCGTGTTAGTCAACGTGGTGAT < 41bp 1 0.579215566737522 1 0.107696533203125 experiment 0.841568866524955 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CACNA1G ENSG00000006283 CDS Human protein_coding chr17:48696108 chr17:48696112 synonymous SNV . 0 25 hm5C_associated_SNPs_42844 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:48696091-48696121
64251 chr2 46609726 46609726 1 + A G UCEC 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCGCAA < 41bp 1 0.384992583837867 1 0.110350042581558 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609726 nonsynonymous SNV 0.871 0 38 hm5C_associated_SNPs_42845 0 0 1 PRPF8 POSTAR2 ENCODE chr2:46609725-46609775
64251 chr7 103008446 103008446 1 + T C UCEC 103008447 + 103008427 103008467 41 TTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATT TTGGAAGCTGTAAATAAGGCCATTAAGTCTTATGCCAAATT < 41bp 1 0.14019435641363 1 0.011517345905304 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMC2 ENSG00000161057 CDS Human protein_coding chr7:103008447 chr7:103008446 nonsynonymous SNV 1.000 5 20 hm5C_associated_SNPs_42847 0 0 1 PUM2 POSTAR2 ENCODE chr7:103008395-103008447
64251 chr10 43292433 43292433 1 + C T UCEC 43292423 + 43292403 43292443 41 AAAGCAGCTCTCCCCACTTTCGATTCTGGGCATTGCACAGC AAAGCAGCTCTCCCCACTTTCGATTCTGGGTATTGCACAGC < 41bp 1 0.200604477227176 1 0.14551317691803 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BMS1 ENSG00000165733 CDS Human protein_coding chr10:43292423 chr10:43292433 nonsynonymous SNV 0.016 1 31 hm5C_associated_SNPs_42848 0 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr10:43292406-43292434
64251 chr14 50247447 50247447 1 + A G UCEC 50247443 + 50247423 50247463 41 GATGCCTGGACTTACTGCATCAGTAAAAATGAATGGATACA GATGCCTGGACTTACTGCATCAGTGAAAATGAATGGATACA < 41bp 1 0.18573091686936 1 0.232321232557297 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KLHDC2 ENSG00000165516 CDS Human protein_coding chr14:50247443 chr14:50247447 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_42849 0 0 4 GRWD1 POSTAR2 ENCODE chr14:50247440-50247491
64251 chr20 44522631 44522631 1 + T C UCEC 44522643 + 44522623 44522663 41 ACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA ACAGGCTTCGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA < 41bp 1 0.139723926052388 1 0.93926477432251 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522643 chr20:44522631 nonsynonymous SNV 0.975 5 9 hm5C_associated_SNPs_42850 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr2 27448062 27448062 1 + A G UCEC 27448047 + 27448027 27448067 41 CGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAGAGATCG CGAGGATCGACGGGCCTTTGCTGCCAGAATGGCAGGGATCG < 41bp 1 0.355657465873748 1 0.0297842025756836 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27448047 chr2:27448062 nonsynonymous SNV 0.994 3 36 hm5C_associated_SNPs_42851 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:27448005-27448063
64251 chr19 50912090 50912090 1 + G A UCEC 50912092 + 50912072 50912112 41 CTTCTCCTCGCTGTACCCGTCCATCATGATGGCCCACAACC CTTCTCCTCGCTGTACCCATCCATCATGATGGCCCACAACC < 41bp 1 0.030931230013118 1 0.0879022181034088 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912092 chr19:50912090 synonymous SNV . 0 19 hm5C_associated_SNPs_42855 1 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50912040-50912120
64251 chrX 73044122 73044122 1 - A G UCEC 73044128 - 73044108 73044148 41 AAGTAGGAAAATTTGAATAACAATGATTATCTTTTGAATAC AAGTAGGAAAATTTGAATAACAATGACTATCTTTTGAATAC < 41bp 1 0.0827411884567328 1 0.0772877335548401 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044128 chrX:73044122 . . 0 27 hm5C_associated_SNPs_42856 0 0 55 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr3 49742457 49742457 1 + T G UCEC 49742448 + 49742428 49742468 41 GGCCCTGGCTGTTGGGGGGCCACTGCCCCTGCCCCGGCCCG GGCCCTGGCTGTTGGGGGGCCACTGCCCCGGCCCCGGCCCG < 41bp 1 0.421870222073821 1 0.664554595947266 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742448 chr3:49742457 nonsynonymous SNV 0.993 3 30 hm5C_associated_SNPs_42858 0 0 7 FUS POSTAR2 GSE43308,GSM1060381 chr3:49742440-49742460
64251 chr19 7987402 7987402 1 + T C UCEC 7987382 + 7987362 7987402 41 CTTCCAGAGGAGCTGCCACTCCTGCCCTGCACAGCCCTGGT CTTCCAGAGGAGCTGCCACTCCTGCCCTGCACAGCCCTGGC < 41bp 1 0.223056547521674 1 0.398325085639954 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987382 chr19:7987402 nonsynonymous SNV 0.005 0 41 hm5C_associated_SNPs_42860 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:7987368-7987418
64251 chr11 71941228 71941228 1 + A G UCEC 71941211 + 71941191 71941231 41 CCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGAGCG CCTGACCAAGATTGGGAAGTCACAGAAGTTCACGCTGGGCG < 41bp 1 0.478471107975137 1 0.44840008020401 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control INPPL1 ENSG00000165458 CDS Human protein_coding chr11:71941211 chr11:71941228 nonsynonymous SNV 0.978 3 38 hm5C_associated_SNPs_42861 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr11:71941220-71941240
64251 chr10 112361858 112361858 1 + G C UCEC 112361869 + 112361849 112361889 41 GTTAGATAGGGGTTACAAATCAATCATGGAACTGATGAATG GTTAGATAGCGGTTACAAATCAATCATGGAACTGATGAATG < 41bp 1 0.276609821509507 1 0.0940138101577759 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361869 chr10:112361858 nonsynonymous SNV 0.960 1 10 hm5C_associated_SNPs_42862 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:112361840-112361880
64251 chr2 204082001 204082001 1 + A C UCEC 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCGAACATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA < 41bp 1 0.232996569824251 1 0.373231410980225 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204082001 nonsynonymous SNV 0.999 3 9 hm5C_associated_SNPs_42863 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr3 150289805 150289805 1 + T C UCEC 150289790 + 150289770 150289810 41 AGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGTATATG AGTTTGGAATTCTAGTTCTACTGAGTTTTGTGCTGCATATG < 41bp 1 0.62291891092463 1 0.159569084644318 experiment 0.754162178150739 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EIF2A ENSG00000144895 CDS Human protein_coding chr3:150289790 chr3:150289805 nonsynonymous SNV 0.996 4 36 hm5C_associated_SNPs_42864 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:150289763-150289811
64251 chr1 110456953 110456953 1 + T C UCEC 110456962 + 110456942 110456982 41 AGGTGTCGGAGTACTGTAGCCACATGATTGGGAGTGGACAC AGGTGTCGGAGCACTGTAGCCACATGATTGGGAGTGGACAC < 41bp 1 0.561716434058714 1 0.729156792163849 experiment 0.876567131882571 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control CSF1 ENSG00000184371 CDS Human protein_coding chr1:110456962 chr1:110456953 nonsynonymous SNV 0.988 0 12 hm5C_associated_SNPs_42866 0 0 2 DDX3X POSTAR2 ENCODE chr1:110456890-110456999
64251 chr22 19707361 19707361 1 + C T UCEC 19707377 + 19707357 19707397 41 GGTCCACAGCCTCTTCCTGACAGACTTGTACAAGGACCGGA GGTCTACAGCCTCTTCCTGACAGACTTGTACAAGGACCGGA < 41bp 1 0.255649407945364 1 0.136840164661407 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SEPT5 ENSG00000184702 CDS Human protein_coding chr22:19707377 chr22:19707361 nonsynonymous SNV 0.999 2 5 hm5C_associated_SNPs_42867 0 0 1 METAP2 POSTAR2 ENCODE chr22:19707328-19707365
64251 chr1 42925463 42925463 1 + T C UCEC 42925451 + 42925431 42925471 41 CTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTATTGTA CTAATATCCTTGAGTCACGACAGTCCTTTGTGCTTATTGTA < 41bp 1 0.0666566424810627 1 0.119754314422607 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPCS ENSG00000127125 CDS Human protein_coding chr1:42925451 chr1:42925463 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_42868 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr10 75542935 75542935 1 + A G UCEC 75542932 + 75542912 75542952 41 ACAGAGGTTTCCTAACAAACCTTACCTCAGCTGAAAATGGA ACAGAGGTTTCCTAACAAACCTTGCCTCAGCTGAAAATGGA < 41bp 1 0.50139017521706 1 0.024468332529068 experiment 0.99721964956588 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542932 chr10:75542935 nonsynonymous SNV 0.378 1 24 hm5C_associated_SNPs_42869 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:75542899-75542997
64251 chr1 114440562 114440562 1 - A G UCEC 114440557 - 114440537 114440577 41 CCTGTATTGTAGTGGTGGTGCAGACTTTCCGAGACCTGGTT CCTGTATTGTAGTGGCGGTGCAGACTTTCCGAGACCTGGTT < 41bp 1 0.404307629682268 1 0.196389585733414 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114440557 chr1:114440562 nonsynonymous SNV 0.973 4 16 hm5C_associated_SNPs_42870 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:114440556-114440572
64251 chr19 59059452 59059452 1 + A T UCEC 59059447 + 59059427 59059467 41 CCTGGAGCGGCAGCACTGGACCATGACCAAGATCCAGAAGC CCTGGAGCGGCAGCACTGGACCATGTCCAAGATCCAGAAGC < 41bp 1 0.233589118236785 1 0.0430557131767273 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059447 chr19:59059452 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_42872 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59059405-59059479
64251 chr19 59059452 59059452 1 + A T UCEC 59059448 + 59059428 59059468 41 CTGGAGCGGCAGCACTGGACCATGACCAAGATCCAGAAGCA CTGGAGCGGCAGCACTGGACCATGTCCAAGATCCAGAAGCA < 41bp 1 0.297813037403453 1 0.12371301651001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIM28 ENSG00000130726 CDS Human protein_coding chr19:59059448 chr19:59059452 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_42873 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:59059405-59059479
64251 chr2 201436919 201436919 1 + A G UCEC 201436921 + 201436901 201436941 41 AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATAATTTCT AGCTTAGAAAGAAAGTAAGCCGGAAGACAGAAATAATTTCT < 41bp 1 0.655636474799541 1 0.547702252864838 experiment 0.688727050400919 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436921 chr2:201436919 nonsynonymous SNV 0.995 1 19 hm5C_associated_SNPs_42876 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201436902-201436953
64251 chr2 152273372 152273372 1 + C T UCEC 152273359 + 152273339 152273379 41 TCATTAGAAATACTGTTTAACAAAGGAGAGACGCATTCTGC TCATTAGAAATACTGTTTAACAAAGGAGAGACGTATTCTGC < 41bp 1 0.285412403324199 1 0.494898647069931 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273359 chr2:152273372 nonsynonymous SNV 0.869 1 34 hm5C_associated_SNPs_42877 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:152273332-152273400
64251 chr16 81053856 81053856 1 + G A UCEC 81053845 + 81053825 81053865 41 CCGTACGCCTTCACGTCCTCCTCCATGCTGAGGCGCAATAC CCGTACGCCTTCACGTCCTCCTCCATGCTGAAGCGCAATAC < 41bp 1 0.792797639448834 1 0.855668187141418 experiment 0.414404721102333 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CENPN ENSG00000166451 CDS Human protein_coding chr16:81053845 chr16:81053856 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_42878 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:81053833-81053862
64251 chr11 73588106 73588106 1 + G A UCEC 73588109 + 73588089 73588129 41 AGAGCGACTGGGCGCAAGCCCTCAGGTGAATCCAGGCCCAG AGAGCGACTGGGCGCAAACCCTCAGGTGAATCCAGGCCCAG < 41bp 1 0.749965959626844 1 0.34308248758316 experiment 0.500068080746313 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAAF1 ENSG00000175575 CDS Human protein_coding chr11:73588109 chr11:73588106 nonsynonymous SNV 0.440 1 18 hm5C_associated_SNPs_42879 0 0 8 BUD13 POSTAR2 ENCODE chr11:73588050-73588184
64251 chr12 95877001 95877001 1 + C T UCEC 95877015 + 95876995 95877035 41 AGATGGCGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA AGATGGTGATGGAGATGGAGCAACTGGAAAGAAGAAGAAAA < 41bp 1 0.332176080976245 1 0.312281757593155 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout METAP2 ENSG00000111142 CDS Human protein_coding chr12:95877015 chr12:95877001 synonymous SNV . 0 7 hm5C_associated_SNPs_42881 0 0 28 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:95876980-95877020
64251 chr12 109604766 109604766 1 + A G UCEC 109604784 + 109604764 109604804 41 TCACACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG TCGCACGCTTTGGGGGGGATCGGGTCATCGAGAAGGTACAG < 41bp 1 0.539434989391666 1 0.738179445266724 experiment 0.921130021216668 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109604784 chr12:109604766 nonsynonymous SNV 0.975 2 3 hm5C_associated_SNPs_42882 0 0 2 PPIG POSTAR2 ENCODE chr12:109604754-109604798
64251 chr19 54969675 54969675 1 + G A UCEC 54969680 + 54969660 54969700 41 GATCGGGAGCGCAAGGTCGCCCTCAAGGCCATGATCAAAAC GATCGGGAGCGCAAGATCGCCCTCAAGGCCATGATCAAAAC < 41bp 1 0.127146863038536 1 0.16665518283844 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969680 chr19:54969675 nonsynonymous SNV 0.997 0 16 hm5C_associated_SNPs_42883 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54969500-54969689
64251 chr8 22054827 22054827 1 + T C UCEC 22054839 + 22054819 22054859 41 TTCTGTGGTTCTGAGAAGCCCGAGGTCATCACCTCCCAGTA TTCTGTGGCTCTGAGAAGCCCGAGGTCATCACCTCCCAGTA < 41bp 1 0.736412684688546 1 0.835934221744537 experiment 0.527174630622908 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054839 chr8:22054827 synonymous SNV . 0 9 hm5C_associated_SNPs_42885 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chr22 30416165 30416165 1 + A G UCEC 30416167 + 30416147 30416187 41 CCCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCTACAG CCCTTTTGAGACCAGAGGGCCAAACGTGGACAGTTCTACAG < 41bp 1 0.109339053689575 1 0.216153085231781 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416167 chr22:30416165 synonymous SNV . 0 19 hm5C_associated_SNPs_42886 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:30416142-30416177
64251 chrX 73045686 73045686 1 - C T UCEC 73045684 - 73045664 73045704 41 TGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGCA TGGGAAGTTGATTTAAATAACTGATAATGTGTATGAAAGCA < 41bp 1 0.0776352859673745 1 0.088361918926239 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045684 chrX:73045686 . . 0 19 hm5C_associated_SNPs_42887 0 0 74 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr16 1825324 1825324 1 + A G UCEC 1825308 + 1825288 1825328 41 GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCAGCAC GCGGGGAGGAATGGTCACCTCTGCTCAGGTCTCGCCGGCAC < 41bp 1 0.792802540466891 1 0.23536741733551 experiment 0.414394919066218 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control EME2 ENSG00000197774 CDS Human protein_coding chr16:1825308 chr16:1825324 nonsynonymous SNV 0.858 1 37 hm5C_associated_SNPs_42888 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:1825297-1825335
64251 chr6 145149981 145149981 1 + A G UCEC 145149979 + 145149959 145149999 41 TCTCACTGATAGCAGCTCCACCACAGGAAGTGTGTAAGTAA TCTCACTGATAGCAGCTCCACCGCAGGAAGTGTGTAAGTAA < 41bp 1 0.187256001790107 1 0.203832030296326 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:145149979 chr6:145149981 nonsynonymous SNV 0.946 2 23 hm5C_associated_SNPs_42889 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:145149957-145149981
64251 chr2 102486192 102486192 1 + G A UCEC 102486184 + 102486164 102486204 41 CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG CAGTGAGGAGTCGGGGACGACGGATGAGAAGGACGACGATG < 41bp 1 0.72136375884327 1 0.550937056541443 experiment 0.557272482313461 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486184 chr2:102486192 nonsynonymous SNV 0.967 2 29 hm5C_associated_SNPs_42890 0 0 7 FMR1 POSTAR2 ENCODE chr2:102486153-102486258
64251 chr12 58109727 58109727 1 + A G UCEC 58109718 + 58109698 58109738 41 CTGTCACCCTTCCCTACAGCCTGAGGAGTACATGGCCTACG CTGTCACCCTTCCCTACAGCCTGAGGAGTGCATGGCCTACG < 41bp 1 0.712179818543154 1 0.43996450304985 experiment 0.575640362913692 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109718 chr12:58109727 nonsynonymous SNV 0.997 4 30 hm5C_associated_SNPs_42891 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:58109720-58109740
64251 chr22 32881154 32881154 1 + A G UCEC 32881149 + 32881129 32881169 41 TCCTCTCTGCGAGGGCAGCTCCGCTACTCTCACCTGTGTGC TCCTCTCTGCGAGGGCAGCTCCGCTGCTCTCACCTGTGTGC < 41bp 1 0.547775651399593 1 0.13800510764122 experiment 0.904448697200814 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881149 chr22:32881154 nonsynonymous SNV 0.148 0 26 hm5C_associated_SNPs_42892 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr2 233684684 233684684 1 + T C UCEC 233684666 + 233684646 233684686 41 GAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAATTGTTA GAAGAGAAGAGGAAGAAAGGCGGAAGCAGGAAGAATTGCTA < 41bp 1 0.685447301839054 1 0.871447563171387 experiment 0.629105396321892 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684666 chr2:233684684 synonymous SNV . 0 39 hm5C_associated_SNPs_42893 0 0 20 AARS POSTAR2 ENCODE chr2:233684681-233684696
64251 chr19 52195866 52195866 1 + G A UCEC 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGACACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC < 41bp 1 0.278326599921535 1 0.159434080123901 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B ENSG00000207550 ncRNA_exonic Human miRNA chr19:52195882 chr19:52195866 . . 0 5 hm5C_associated_SNPs_42894 0 0 29 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195860-52195880
64251 chr19 52195866 52195866 1 + G A UCEC 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGACACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC < 41bp 1 0.41618105189622 1 0.228709310293198 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B ENSG00000207550 ncRNA_exonic Human miRNA chr19:52195883 chr19:52195866 . . 0 4 hm5C_associated_SNPs_42895 0 0 29 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195860-52195880
64251 chr19 52195866 52195866 1 + G A UCEC 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA ACACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA < 41bp 1 0.0935660176439919 1 0.0172544419765472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B ENSG00000207550 ncRNA_exonic Human miRNA chr19:52195886 chr19:52195866 . . 0 1 hm5C_associated_SNPs_42896 0 0 29 ALKBH1 POSTAR2 GSE65299,GSM2107198 chr19:52195860-52195880
64251 chr22 39078397 39078397 1 + G A UCEC 39078388 + 39078368 39078408 41 AGATGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCCACT AGATGTTTCCGGAGAGGGTCCGGTCCGCGACCGGAGCCACT < 41bp 1 0.344554108256391 1 0.335571259260178 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078388 chr22:39078397 nonsynonymous SNV 0.961 1 30 hm5C_associated_SNPs_42897 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr22:39078369-39078401
64251 chr2 200824529 200824529 1 + A G UCEC 200824514 + 200824494 200824534 41 AGAAAAGGTTACTTCACTACCTGACAACCATAAAAATGCCC AGAAAAGGTTACTTCACTACCTGACAACCATAAAAGTGCCC < 41bp 1 0.218625588336161 1 0.153344243764877 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824514 chr2:200824529 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_42898 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:200824526-200824549
64251 chr5 21497203 21497203 1 + A G UCEC 21497215 + 21497195 21497235 41 TGGAGTTGATTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAC TGGAGTTGGTTCAGCTGCAGCTGGCCGCCCAGTTTGAGAAC < 41bp 1 0.332576666178374 1 0.763272941112518 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21497215 chr5:21497203 . . 0 9 hm5C_associated_SNPs_42899 0 0 1 DDX24 POSTAR2 ENCODE chr5:21497193-21497265
64251 chr16 14978310 14978310 1 + A G UCEC 14978325 + 14978305 14978345 41 TGATCACTTCCTCTGAATACCTTCCTACATTATGGGTAAGT TGATCGCTTCCTCTGAATACCTTCCTACATTATGGGTAAGT < 41bp 1 0.034286146559342 1 0.0270529091358185 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14978325 chr16:14978310 nonsynonymous SNV 0.998 4 6 hm5C_associated_SNPs_42900 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:14978110-14978414
64251 chr16 14978310 14978310 1 + A G UCEC 14978328 + 14978308 14978348 41 TCACTTCCTCTGAATACCTTCCTACATTATGGGTAAGTCCA TCGCTTCCTCTGAATACCTTCCTACATTATGGGTAAGTCCA < 41bp 1 0.00884978982566549 1 0.391550302505493 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14978328 chr16:14978310 nonsynonymous SNV 0.998 4 3 hm5C_associated_SNPs_42901 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:14978110-14978414
64251 chr19 11105622 11105622 1 + G A UCEC 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACGGAGCAGGAGCAGAAGAAAGAGAACGAGCGG < 41bp 1 0.627182896981921 1 0.691103219985962 experiment 0.745634206036158 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105622 nonsynonymous SNV 0.995 4 16 hm5C_associated_SNPs_42902 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:11105600-11105640
64251 chr2 242688328 242688328 1 + G A UCEC 242688316 + 242688296 242688336 41 CGCCTGTGGTCCTGGGAGCCCGAGGCCAGCCCGGCTGCCGC CGCCTGTGGTCCTGGGAGCCCGAGGCCAGCCCAGCTGCCGC < 41bp 1 0.783533287475821 1 0.936702489852905 experiment 0.432933425048358 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242688316 chr2:242688328 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_42903 0 0 1 PPIG POSTAR2 ENCODE chr2:242688291-242688328
64251 chr18 29116357 29116357 1 + G A UCEC 29116350 + 29116330 29116370 41 GTTTCTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAA GTTTCTCCGTCATTGACAAACCACCTGACATGGCAGAAAAA < 41bp 1 0.106693793925235 1 0.173202782869339 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116350 chr18:29116357 nonsynonymous SNV 0.825 3 28 hm5C_associated_SNPs_42905 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr18 29116357 29116357 1 + G A UCEC 29116354 + 29116334 29116374 41 CTCCGTCATTGACAAACCACCTGGCATGGCAGAAAAATGGA CTCCGTCATTGACAAACCACCTGACATGGCAGAAAAATGGA < 41bp 1 0.231699878071805 1 0.14175420999527 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116354 chr18:29116357 nonsynonymous SNV 0.825 3 24 hm5C_associated_SNPs_42906 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr18 29116357 29116357 1 + G A UCEC 29116363 + 29116343 29116383 41 TGACAAACCACCTGGCATGGCAGAAAAATGGAAAATAGCAC TGACAAACCACCTGACATGGCAGAAAAATGGAAAATAGCAC < 41bp 1 0.568172152591567 1 0.292733013629913 experiment 0.863655694816866 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116363 chr18:29116357 nonsynonymous SNV 0.825 3 15 hm5C_associated_SNPs_42907 0 0 1 SND1 POSTAR2 ENCODE chr18:29116281-29116361
64251 chr2 86947842 86947842 1 + T C UCEC 86947846 + 86947826 86947866 41 GAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGCTGTGCG GAAGGTGCTGCACAAGCTCTCAGGCTACGGGCAGCTGTGCG < 41bp 1 0.724075822009828 1 0.946384727954865 experiment 0.551848355980345 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RMND5A ENSG00000153561 CDS Human protein_coding chr2:86947846 chr2:86947842 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_42909 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:86947827-86947847
64251 chr3 97661200 97661200 1 + C T UCEC 97661188 + 97661168 97661208 41 CACCTGGAGCTAAAGTAGCTCTATGGACTGAACATGGGCAA CACCTGGAGCTAAAGTAGCTCTATGGACTGAATATGGGCAA < 41bp 1 0.207544321647576 1 0.114064633846283 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRYBG3 ENSG00000080200 CDS Human protein_coding chr3:97661188 chr3:97661200 nonsynonymous SNV 0.748 3 33 hm5C_associated_SNPs_42910 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:97661180-97661200
64251 chr16 57171172 57171172 1 + C T UCEC 57171175 + 57171155 57171195 41 CCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGG CCGGTTTGCGGCCCAGGTCACACAACAGCGGACGGCCACGG < 41bp 1 0.715182455890184 1 0.37892147898674 experiment 0.569635088219632 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171175 chr16:57171172 nonsynonymous SNV 0.989 3 18 hm5C_associated_SNPs_42911 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr15 22940741 22940741 1 + T C UCEC 22940756 + 22940736 22940776 41 GCACATCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAG GCACACCCTCCGGCAGCAGCCCTCAGTACAACATCTGCGAG < 41bp 1 0.359420106404733 1 0.381530851125717 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22940756 chr15:22940741 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_42912 0 0 1 PPIG POSTAR2 ENCODE chr15:22940739-22940786
64251 chr5 82834792 82834792 1 + T C UCEC 82834788 + 82834768 82834808 41 CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA CATATCTGACTCAGAAGGACCCAGCAGCACCATGGTCAGCA < 41bp 1 0.045448599423381 1 0.132387697696686 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834788 chr5:82834792 synonymous SNV . 0 25 hm5C_associated_SNPs_42913 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82834734-82834796
64251 chr1 70700415 70700415 1 + A G UCEC 70700412 + 70700392 70700432 41 CACTGGCTGCTTTGGGGGCTCCTACTCTTGATCCTGCCCTT CACTGGCTGCTTTGGGGGCTCCTGCTCTTGATCCTGCCCTT < 41bp 1 0.427488997431395 1 0.197558969259262 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF11 ENSG00000116754 CDS Human protein_coding chr1:70700412 chr1:70700415 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_42919 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:70700379-70700423
64251 chr22 41742209 41742209 1 + C T UCEC 41742194 + 41742174 41742214 41 CTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGCGAGGT CTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGTGAGGT < 41bp 1 0.290688308388627 1 0.154329657554626 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H7B ENSG00000100403 CDS Human protein_coding chr22:41742194 chr22:41742209 synonymous SNV . 0 36 hm5C_associated_SNPs_42920 0 0 1 YBX3 POSTAR2 ENCODE chr22:41742158-41742213
64251 chr7 100204247 100204247 1 + G T UCEC 100204239 + 100204219 100204259 41 TCCGGAGAAAACAGAGGAATCTCCTTCAGCCCCTGGTGAGT TCCGGAGAAAACAGAGGAATCTCCTTCATCCCCTGGTGAGT < 41bp 1 0.33288592280398 1 0.11872586607933 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100204239 chr7:100204247 nonsynonymous SNV 0.001 0 29 hm5C_associated_SNPs_42922 0 0 1 SND1 POSTAR2 ENCODE chr7:100204245-100204255
64251 chr7 55270297 55270297 1 + G A UCEC 55270305 + 55270285 55270325 41 GACAGCATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTG GACAGCATAGACAACACCTTCCTCCCAGTGCCTGGTGAGTG < 41bp 1 0.0441989786480863 1 0.0338515937328339 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55270305 chr7:55270297 nonsynonymous SNV 0.943 2 13 hm5C_associated_SNPs_42923 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr7:55270262-55270300
64251 chr9 91041450 91041450 1 + G A UCEC 91041433 + 91041413 91041453 41 ACCCTAGTCCAGCAGCTCCGCTGCTCACTTAAATACAGATG ACCCTAGTCCAGCAGCTCCGCTGCTCACTTAAATACAAATG < 41bp 1 0.455721350230475 1 0.373258322477341 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 UTR5 Human protein_coding chr9:91041433 chr9:91041450 . . 0 38 hm5C_associated_SNPs_42924 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr9:91041405-91041453
64251 chr12 95694213 95694213 1 + G A UCEC 95694232 + 95694212 95694252 41 AGCAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCA AACAGATGGAAGTGGTCTGACCACTGCCCCTCCAACTCCCA < 41bp 1 0.333348836944593 1 0.161350458860397 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95694232 chr12:95694213 nonsynonymous SNV 0.001 0 2 hm5C_associated_SNPs_42926 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr12:95694143-95694213
64251 chr2 71297694 71297694 1 + A C UCEC 71297704 + 71297684 71297724 41 GCAGAAGCAGATGGACTGAGCACAAACCACTGGGTAAAAAC GCAGAAGCAGCTGGACTGAGCACAAACCACTGGGTAAAAAC < 41bp 1 0.597970913841022 1 0.27280205488205 experiment 0.804058172317956 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAGK ENSG00000124357 CDS Human protein_coding chr2:71297704 chr2:71297694 nonsynonymous SNV 1.000 0 11 hm5C_associated_SNPs_42927 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:71297625-71297704
64251 chr17 38142911 38142911 1 + C A UCEC 38142926 + 38142906 38142946 41 GAAGCCTATCTCCAACTCCTCGTGGTCATCTTCATGATGAA GAAGCATATCTCCAACTCCTCGTGGTCATCTTCATGATGAA < 41bp 1 0.415030859499511 1 0.196974486112595 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38142926 chr17:38142911 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_42928 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38142877-38142942
64251 chr1 220964953 220964953 1 + G T UCEC 220964933 + 220964913 220964953 41 GCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACAAAG GCGATGGTGACACCCTGACTCTCAGTGCAGCCTACACAAAT < 41bp 1 0.690157095877032 1 0.34901151061058 experiment 0.619685808245935 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARC1 ENSG00000186205 CDS Human protein_coding chr1:220964933 chr1:220964953 nonsynonymous SNV 0.994 0 41 hm5C_associated_SNPs_42929 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:220964942-220964961
64251 chrX 12838855 12838855 1 + T C UCEC 12838861 + 12838841 12838881 41 AAATAATGCCGCCTTTGAGGCTGTTGTCGTCACAAACACAA AAATAATGCCGCCTCTGAGGCTGTTGTCGTCACAAACACAA < 41bp 1 0.32427362800053 1 0.109329283237457 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12838861 chrX:12838855 nonsynonymous SNV 0.993 1 15 hm5C_associated_SNPs_42931 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:12838827-12838863
64251 chr2 32656077 32656077 1 + G T UCEC 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTCAACAAGAACAGCAGCAAATGAGGCATCCTCAA < 41bp 1 0.274143737729467 1 0.374160945415497 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656077 nonsynonymous SNV 0.997 5 28 hm5C_associated_SNPs_42932 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chrX 70356853 70356853 1 + A G UCEC 70356839 + 70356819 70356859 41 CACCTTAACTACAGGCAAGGCTCCATAGGCCTGTACACCCA CACCTTAACTACAGGCAAGGCTCCATAGGCCTGTGCACCCA < 41bp 1 0.750753052002313 1 0.975857138633728 experiment 0.498493895995374 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70356839 chrX:70356853 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_42933 0 0 2 SF3B1 POSTAR2 ENCODE chrX:70356835-70356876
64251 chr3 99509760 99509760 1 + G T UCEC 99509758 + 99509738 99509778 41 GCAAGGAGATGCCCCACTTGCAGTATGGCAAAGAGTATCCA GCAAGGAGATGCCCCACTTGCATTATGGCAAAGAGTATCCA < 41bp 1 0.311490425052998 1 0.11531013250351 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL8A1 ENSG00000144810 CDS Human protein_coding chr3:99509758 chr3:99509760 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_42934 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr3:99509740-99509760
64251 chr8 98837320 98837320 1 + G A UCEC 98837312 + 98837292 98837332 41 TTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAATGG TTGATTAGCTGTGTTTGGAACTGCTACCAATACATCAATGG < 41bp 1 0.226957202487686 1 0.103724330663681 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAPTM4B ENSG00000104341 CDS Human protein_coding chr8:98837312 chr8:98837320 nonsynonymous SNV 0.977 4 29 hm5C_associated_SNPs_42935 0 0 29 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:98837320-98837340
64251 chr11 75279984 75279984 1 + G A UCEC 75279988 + 75279968 75280008 41 TCCGCTCCTCTCCCAGGCCTCTACAACTACTACGACGACGA TCCGCTCCTCTCCCAGACCTCTACAACTACTACGACGACGA < 41bp 1 0.597900610413911 1 0.677691340446472 experiment 0.804198779172177 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279988 chr11:75279984 nonsynonymous SNV 0.920 4 17 hm5C_associated_SNPs_42941 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:75279980-75280000
64251 chr2 71297701 71297701 1 + G A UCEC 71297704 + 71297684 71297724 41 GCAGAAGCAGATGGACTGAGCACAAACCACTGGGTAAAAAC GCAGAAGCAGATGGACTAAGCACAAACCACTGGGTAAAAAC < 41bp 1 0.627389898650434 1 0.273150742053986 experiment 0.745220202699132 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAGK ENSG00000124357 CDS Human protein_coding chr2:71297704 chr2:71297701 synonymous SNV . 0 18 hm5C_associated_SNPs_42943 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:71297625-71297704
64251 chr13 76430722 76430722 1 + C T UCEC 76430734 + 76430714 76430754 41 TACTGCAACGACTGCTATCTCAGATTCAAATGTAAGAGAGC TACTGCAATGACTGCTATCTCAGATTCAAATGTAAGAGAGC < 41bp 1 0.327781586369823 1 0.72634756565094 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76430734 chr13:76430722 nonsynonymous SNV 0.989 0 9 hm5C_associated_SNPs_42944 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:76430700-76430722
64251 chr12 53663766 53663766 1 + T C UCEC 53663747 + 53663727 53663767 41 GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCTG GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCCG < 41bp 1 0.185264246156727 1 0.330729782581329 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663747 chr12:53663766 nonsynonymous SNV 0.994 4 40 hm5C_associated_SNPs_42945 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:53663749-53663772
64251 chr4 123145740 123145740 1 + G A UCEC 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAAAAGG < 41bp 1 0.403037618529793 1 0.193276137113571 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145740 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_42947 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chr6 31593321 31593321 1 + C T UCEC 31593332 + 31593312 31593352 41 GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC GTCATGATCTCCGGGGTGGGCTACAGCCTTCAGGCCCACCC < 41bp 1 0.664750008499754 1 0.473716467618942 experiment 0.670499983000491 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593332 chr6:31593321 nonsynonymous SNV 0.995 3 10 hm5C_associated_SNPs_42948 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:31593320-31593340
64251 chr19 1279098 1279098 1 + T C UCEC 1279105 + 1279085 1279125 41 TGACTGTGACTTGTGCCTCTCTCCTGCCCCCGTGGGGACAT TGACTGTGACTTGCGCCTCTCTCCTGCCCCCGTGGGGACAT < 41bp 1 0.687755592604298 1 0.20723769068718 experiment 0.624488814791403 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C19orf24 ENSG00000228300 CDS Human protein_coding chr19:1279105 chr19:1279098 nonsynonymous SNV 0.015 1 14 hm5C_associated_SNPs_42950 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1279057-1279114
64251 chr17 48551156 48551156 1 + C T UCEC 48551147 + 48551127 48551167 41 AGGACTTCTTTCACACACACCCGAAGGTGCAGGAAGTGCAG AGGACTTCTTTCACACACACCCGAAGGTGTAGGAAGTGCAG < 41bp 1 0.362623186197135 1 0.113216400146484 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48551147 chr17:48551156 stopgain 1.000 0 30 hm5C_associated_SNPs_42951 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48551151-48551166
64251 chrX 133511660 133511660 1 + G A UCEC 133511658 + 133511638 133511678 41 TTTAAAAATCATGTCAAGCTCAGTTGAACAGAAAAAAGGGC TTTAAAAATCATGTCAAGCTCAATTGAACAGAAAAAAGGGC < 41bp 1 0.158304630136289 1 0.160099238157272 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133511658 chrX:133511660 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_42952 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:133511634-133511660
64251 chr5 149406363 149406363 1 + G A UCEC 149406376 + 149406356 149406396 41 CATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAG CATGAGAACAATTTTGCCAGCCCCAGTTAACGTGGGGCGAG < 41bp 1 0.453697795164261 1 0.124432504177094 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406376 chr5:149406363 nonsynonymous SNV 0.999 3 8 hm5C_associated_SNPs_42956 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149406334-149406363
64251 chr5 149406363 149406363 1 + G A UCEC 149406377 + 149406357 149406397 41 ATGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGG ATGAGAACAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGG < 41bp 1 0.174886697061082 1 0.0779462158679962 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406377 chr5:149406363 nonsynonymous SNV 0.999 3 7 hm5C_associated_SNPs_42957 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149406334-149406363
64251 chr5 149406363 149406363 1 + G A UCEC 149406378 + 149406358 149406398 41 TGAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGC TGAGAACAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGC < 41bp 1 0.13333978792064 1 0.276255935430527 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406378 chr5:149406363 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_42958 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149406334-149406363
64251 chr5 149406363 149406363 1 + G A UCEC 149406379 + 149406359 149406399 41 GAGAGCAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGCA GAGAACAATTTTGCCAGCCCCAGTTAACGTGGGGCGAGGCA < 41bp 1 0.127607316171142 1 0.425476908683777 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149406379 chr5:149406363 nonsynonymous SNV 0.999 3 5 hm5C_associated_SNPs_42959 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149406334-149406363
64251 chr7 101891761 101891761 1 + C T UCEC 101891755 + 101891735 101891775 41 GGGAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGC GGGAGTCAGGGCCAGGCGGGCGCCAGTGACTCACCCTCGGC < 41bp 1 0.693356395494251 1 0.557564914226532 experiment 0.613287209011498 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891755 chr7:101891761 synonymous SNV . 0 27 hm5C_associated_SNPs_42960 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891761 101891761 1 + C T UCEC 101891757 + 101891737 101891777 41 GAGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCC GAGTCAGGGCCAGGCGGGCGCCAGTGACTCACCCTCGGCCC < 41bp 1 0.409599772625869 1 0.377107411623001 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891757 chr7:101891761 synonymous SNV . 0 25 hm5C_associated_SNPs_42961 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr7 101891761 101891761 1 + C T UCEC 101891758 + 101891738 101891778 41 AGTCAGGGCCAGGCGGGCGCCAGCGACTCACCCTCGGCCCG AGTCAGGGCCAGGCGGGCGCCAGTGACTCACCCTCGGCCCG < 41bp 1 0.50210498813852 1 0.591745853424072 experiment 0.995790023722959 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101891758 chr7:101891761 synonymous SNV . 0 24 hm5C_associated_SNPs_42962 0 0 1 FXR2 POSTAR2 ENCODE chr7:101891750-101891816
64251 chr1 162039990 162039990 1 + A C UCEC 162040009 + 162039989 162040029 41 AACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA ACCCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA < 41bp 1 0.367088229704225 1 0.468978017568588 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162040009 chr1:162039990 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_42963 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162039974-162040029
64251 chr13 113732714 113732714 1 + C T UCEC 113732702 + 113732682 113732722 41 CGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCT CGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGTGGTGCGCT < 41bp 1 0.324492745852953 1 0.303036868572235 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCF2L ENSG00000126217 CDS Human protein_coding chr13:113732702 chr13:113732714 synonymous SNV . 0 33 hm5C_associated_SNPs_42964 0 0 6 BUD13 POSTAR2 ENCODE chr13:113732629-113732725
64251 chr1 75214444 75214444 1 + G A UCEC 75214439 + 75214419 75214459 41 TTTTATTTTCTTACAGCATTCCATGGCAATAGATTCTGGTT TTTTATTTTCTTACAGCATTCCATGACAATAGATTCTGGTT < 41bp 1 0.110797422867234 1 0.341788798570633 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TYW3 ENSG00000162623 CDS Human protein_coding chr1:75214439 chr1:75214444 nonsynonymous SNV 0.993 4 26 hm5C_associated_SNPs_42965 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:75214432-75214480
64251 chr1 75214444 75214444 1 + G A UCEC 75214440 + 75214420 75214460 41 TTTATTTTCTTACAGCATTCCATGGCAATAGATTCTGGTTT TTTATTTTCTTACAGCATTCCATGACAATAGATTCTGGTTT < 41bp 1 0.412586819727914 1 0.133907645940781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TYW3 ENSG00000162623 CDS Human protein_coding chr1:75214440 chr1:75214444 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_42966 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:75214432-75214480
64251 chr10 75830571 75830571 1 + A T UCEC 75830552 + 75830532 75830572 41 TCCTCTCTGGAACATCAGACCTGCTCCTTACCTTCGATGAG TCCTCTCTGGAACATCAGACCTGCTCCTTACCTTCGATGTG < 41bp 1 0.316635524103393 1 0.026380181312561 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75830552 chr10:75830571 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_42967 0 0 1 DDX24 POSTAR2 ENCODE chr10:75830555-75830579
64251 chrX 77373633 77373633 1 + A T UCEC 77373646 + 77373626 77373666 41 CTTGGAGAGCCCAGAGCGACCCTTCCTGGCCATCCTGGGCG CTTGGAGTGCCCAGAGCGACCCTTCCTGGCCATCCTGGGCG < 41bp 1 0.0737082680129575 1 0.0477201342582703 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373646 chrX:77373633 nonsynonymous SNV 0.995 2 8 hm5C_associated_SNPs_42968 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:77373593-77373636
64251 chr16 28845686 28845686 1 + C A UCEC 28845668 + 28845648 28845688 41 GTGTCCTCATCCCCAGGCACCTCAGATGTATCCATATCCTG GTGTCCTCATCCCCAGGCACCTCAGATGTATCCATATCATG < 41bp 1 0.237769794153093 1 0.0978447198867798 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845668 chr16:28845686 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_42969 0 0 24 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:28845660-28845700
64251 chr3 50131284 50131284 1 + T A UCEC 50131269 + 50131249 50131289 41 GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCAT GAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTACCCAT < 41bp 1 0.469317983406844 1 0.236827671527863 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131269 chr3:50131284 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_42970 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:50131260-50131300
64251 chr17 4701670 4701670 1 + G A UCEC 4701676 + 4701656 4701696 41 GGCAAGTACTTTTGGGAGACCAGATACCCAAATTCGCCGTT GGCAAGTACTTTTGAGAGACCAGATACCCAAATTCGCCGTT < 41bp 1 0.720002888579915 1 0.434765309095383 experiment 0.559994222840169 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701676 chr17:4701670 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_42974 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4701628-4701787
64251 chr18 9954115 9954115 1 + C A UCEC 9954099 + 9954079 9954119 41 ACATTCGGATAAACCTGGATCAACCTCAACTGCATCCTTCA ACATTCGGATAAACCTGGATCAACCTCAACTGCATCATTCA < 41bp 1 0.231366068333189 1 0.14709135890007 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VAPA ENSG00000101558 CDS Human protein_coding chr18:9954099 chr18:9954115 synonymous SNV . 0 37 hm5C_associated_SNPs_42975 0 0 5 NOP58 POSTAR2 GSE43666,GSM1067861 chr18:9954077-9954115
64251 chr12 95888844 95888844 1 + C T UCEC 95888833 + 95888813 95888853 41 CTCTCAATAATTGTGCTGCCCATTATACTCCCAATGCCGGT CTCTCAATAATTGTGCTGCCCATTATACTCCTAATGCCGGT < 41bp 1 0.32145210351568 1 0.0506909787654877 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95888833 chr12:95888844 synonymous SNV . 0 32 hm5C_associated_SNPs_42976 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:95888742-95888913
64251 chr21 46900044 46900044 1 + G T UCEC 46900048 + 46900028 46900068 41 GCCTCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC GCCTCCAGGGCCCCCATGACCCTCCTTCAGACACGACAAGC < 41bp 1 0.0737262142589496 1 0.0499127507209778 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900048 chr21:46900044 stopgain 0.990 1 17 hm5C_associated_SNPs_42977 0 0 1 TROVE2 POSTAR2 ENCODE chr21:46899991-46900044
64251 chrX 48385628 48385628 1 + C T UCEC 48385618 + 48385598 48385638 41 CTCAGCCTGTGGGTGGTGATCGCCTTTCTCCGCCAGCATCC CTCAGCCTGTGGGTGGTGATCGCCTTTCTCTGCCAGCATCC < 41bp 1 0.773073391373659 1 0.201389014720917 experiment 0.453853217252682 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control EBP ENSG00000147155 CDS Human protein_coding chrX:48385618 chrX:48385628 nonsynonymous SNV 0.993 3 31 hm5C_associated_SNPs_42980 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48385615-48385656
64251 chr1 154313344 154313344 1 + G A UCEC 154313339 + 154313319 154313359 41 CCCCTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTA CCCCTGTGCAGTGTGGAGGTCATCCATCTGGGCCACAGCTA < 41bp 1 0.105938893072267 1 0.0305734872817993 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313339 chr1:154313344 nonsynonymous SNV 0.996 4 26 hm5C_associated_SNPs_42983 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr1 154313344 154313344 1 + G A UCEC 154313342 + 154313322 154313362 41 CTGTGCAGTGTGGAGGTCATCCGTCTGGGCCACAGCTACTT CTGTGCAGTGTGGAGGTCATCCATCTGGGCCACAGCTACTT < 41bp 1 0.113061878441325 1 0.0321570932865143 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154313342 chr1:154313344 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_42984 0 0 3 DDX24 POSTAR2 ENCODE chr1:154313328-154313380
64251 chr9 139730262 139730262 1 + G A UCEC 139730261 + 139730241 139730281 41 CGCCACGCTGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGG CGCCACGCTGGAGGAGCTGTCAGTGCAGCAGGAGACGGAGG < 41bp 1 0.481985137743974 1 0.558240115642548 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139730261 chr9:139730262 synonymous SNV . 0 22 hm5C_associated_SNPs_42988 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:139730240-139730280
64251 chr9 139730262 139730262 1 + G A UCEC 139730269 + 139730249 139730289 41 TGGAGGAGCTGTCGGTGCAGCAGGAGACGGAGGACCAGAAC TGGAGGAGCTGTCAGTGCAGCAGGAGACGGAGGACCAGAAC < 41bp 1 0.785914899634106 1 0.824975371360779 experiment 0.428170200731788 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139730269 chr9:139730262 synonymous SNV . 0 14 hm5C_associated_SNPs_42989 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:139730240-139730280
64251 chr5 908490 908490 1 + C T UCEC 908507 + 908487 908527 41 CGCCCGAAATGCCTGCAGGGCGGGCACCGAGCCATCAGATG CGCTCGAAATGCCTGCAGGGCGGGCACCGAGCCATCAGATG < 41bp 1 0.540329602113494 1 0.302717089653015 experiment 0.919340795773012 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908507 chr5:908490 synonymous SNV . 0 4 hm5C_associated_SNPs_42990 0 0 1 DDX24 POSTAR2 ENCODE chr5:908469-908500
64251 chr14 73725984 73725984 1 + A G UCEC 73725978 + 73725958 73725998 41 TTTTGCTTCTTCTTTCTAGACTCCAGAGGCCAGTGGTGGGC TTTTGCTTCTTCTTTCTAGACTCCAGGGGCCAGTGGTGGGC < 41bp 1 0.714141465193618 1 0.902935147285461 experiment 0.571717069612763 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAPLN ENSG00000100767 CDS Human protein_coding chr14:73725978 chr14:73725984 synonymous SNV . 0 27 hm5C_associated_SNPs_42991 0 0 2 DDX24 POSTAR2 ENCODE chr14:73725975-73726020
64251 chr11 125445274 125445274 1 + G T UCEC 125445260 + 125445240 125445280 41 CGAAGAAGGGCAAGTAGTGTCTTGGCACAGAGAAGAGCCCA CGAAGAAGGGCAAGTAGTGTCTTGGCACAGAGAATAGCCCA < 41bp 1 0.688500536006585 1 0.43730503320694 experiment 0.62299892798683 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EI24 ENSG00000149547 CDS Human protein_coding chr11:125445260 chr11:125445274 stopgain 0.998 4 35 hm5C_associated_SNPs_42992 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:125445234-125445286
64251 chr19 42398345 42398345 1 + A T UCEC 42398364 + 42398344 42398384 41 GACAAGAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT GTCAAGAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT < 41bp 1 0.155623399622772 1 0.401497393846512 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42398364 chr19:42398345 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_42993 0 0 3 DDX24 POSTAR2 ENCODE chr19:42398332-42398365
64251 chr19 56172418 56172418 1 + C A UCEC 56172435 + 56172415 56172455 41 ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG ATTACAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG < 41bp 1 0.604002407604264 1 0.72695380449295 experiment 0.791995184791472 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172435 chr19:56172418 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_42994 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:56172395-56172438
64251 chr19 56172418 56172418 1 + C A UCEC 56172437 + 56172417 56172457 41 TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC TACAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC < 41bp 1 0.140769279748631 1 0.142303436994553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172437 chr19:56172418 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_42995 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:56172395-56172438
64251 chr19 56172418 56172418 1 + C A UCEC 56172438 + 56172418 56172458 41 CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT ACAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT < 41bp 1 0.725518364443546 1 0.71308434009552 experiment 0.548963271112909 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172438 chr19:56172418 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_42996 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:56172395-56172438
64251 chr20 60963513 60963513 1 + G T UCEC 60963516 + 60963496 60963536 41 TTTTCCCCTGGTTCTAGGAACTTTTGACTGGAGAGAATCAC TTTTCCCCTGGTTCTAGTAACTTTTGACTGGAGAGAATCAC < 41bp 1 0.153124052771151 1 0.0490667521953583 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS21 ENSG00000171858 CDS Human protein_coding chr20:60963516 chr20:60963513 nonsynonymous SNV 0.932 1 18 hm5C_associated_SNPs_42997 0 0 77 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60963361-60963568
64251 chrX 70517700 70517700 1 + G A UCEC 70517707 + 70517687 70517727 41 CAGGAGGAAGAGCGCAGGCGCCGTGAAGAAGAGATGCGGCG CAGGAGGAAGAGCACAGGCGCCGTGAAGAAGAGATGCGGCG < 41bp 1 0.179988274665629 1 0.288371682167053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517707 chrX:70517700 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_42998 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70517674-70517712
64251 chr11 121495975 121495975 1 + A T UCEC 121495977 + 121495957 121495997 41 CCATCCTGCTGTACGATGAGCTGGGGTCTGGTGAGTTGCGA CCATCCTGCTGTACGATGTGCTGGGGTCTGGTGAGTTGCGA < 41bp 1 0.448612706719602 1 0.421901792287827 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SORL1 ENSG00000137642 CDS Human protein_coding chr11:121495977 chr11:121495975 nonsynonymous SNV 0.870 2 19 hm5C_associated_SNPs_42999 0 0 1 IGF2BP1 POSTAR2 ENCODE chr11:121495887-121495993
64251 chr14 102502976 102502976 1 + C A UCEC 102502965 + 102502945 102502985 41 GTGCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGT GTGCACTGAGATTCGGTAACCCCCTTCTGGTACAGGTTGGT < 41bp 1 0.0389917435473406 1 0.0467683970928192 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502965 chr14:102502976 synonymous SNV . 0 32 hm5C_associated_SNPs_43000 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102502954-102502977
64251 chr14 102502976 102502976 1 + C A UCEC 102502967 + 102502947 102502987 41 GCACTGAGATTCGGTAACCCCCTTCTGGTCCAGGTTGGTGT GCACTGAGATTCGGTAACCCCCTTCTGGTACAGGTTGGTGT < 41bp 1 0.0103070109324478 1 0.0528272390365601 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102502967 chr14:102502976 synonymous SNV . 0 30 hm5C_associated_SNPs_43001 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102502954-102502977
64251 chr21 33032114 33032114 1 + G T UCEC 33032103 + 33032083 33032123 41 ATGGCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCC ATGGCGACGAAGGCCGTGTGCGTGCTGAAGGTCGACGGCCC < 41bp 1 0.741967437304138 1 0.176008939743042 experiment 0.516065125391725 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOD1 ENSG00000142168 CDS Human protein_coding chr21:33032103 chr21:33032114 nonsynonymous SNV 0.906 5 32 hm5C_associated_SNPs_43002 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819209 chr21:33031980-33032120
64251 chr5 145849213 145849213 1 + G A UCEC 145849206 + 145849186 145849226 41 AGCTGGAGCAACAGCAGTTTCTGAATGGACTGAATATAAAA AGCTGGAGCAACAGCAGTTTCTGAATGAACTGAATATAAAA < 41bp 1 0.770237129704155 1 0.555145382881165 experiment 0.459525740591691 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145849206 chr5:145849213 stopgain 1.000 1 28 hm5C_associated_SNPs_43003 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:145849180-145849220
64251 chr17 21731059 21731059 1 + T G UCEC 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCGT < 41bp 1 0.2841671960886 1 0.368293553590775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731059 nonsynonymous SNV 0.962 2 40 hm5C_associated_SNPs_43004 0 0 4 UCHL5 POSTAR2 ENCODE chr17:21731056-21731094
64251 chr1 231401803 231401803 1 + T G UCEC 231401783 + 231401763 231401803 41 TTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTT TTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTG < 41bp 1 0.0857851457105864 1 0.0545059442520142 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401783 chr1:231401803 synonymous SNV . 0 41 hm5C_associated_SNPs_43005 0 0 6 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:231401791-231401812
64251 chr9 91930098 91930098 1 + C T UCEC 91930099 + 91930079 91930119 41 TAACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAG TAACAGGCATGTTATGTTATCCAGAGAACTTTCCAAACAAG < 41bp 1 0.683957446417988 1 0.699949562549591 experiment 0.632085107164025 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930099 chr9:91930098 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_43006 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930080-91930100
64251 chr9 91930098 91930098 1 + C T UCEC 91930100 + 91930080 91930120 41 AACAGGCATGTTATGTTACCCAGAGAACTTTCCAAACAAGT AACAGGCATGTTATGTTATCCAGAGAACTTTCCAAACAAGT < 41bp 1 0.497682009109605 1 0.670906662940979 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930100 chr9:91930098 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_43007 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:91930080-91930100
64251 chr2 219269110 219269110 1 + G A UCEC 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGCAACTCAGCCGTGTGGACGACATGTACTCAGTGCTCAG < 41bp 1 0.719511784992361 1 0.124027281999588 experiment 0.560976430015278 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269110 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_43008 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:219269089-219269112
64251 chr14 24634093 24634093 1 + C A UCEC 24634110 + 24634090 24634130 41 CACCTGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGC CACATGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGC < 41bp 1 0.559674772199058 1 0.423234522342682 experiment 0.880650455601884 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRF9 ENSG00000213928 CDS Human protein_coding chr14:24634110 chr14:24634093 nonsynonymous SNV 0.759 3 4 hm5C_associated_SNPs_43009 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:24634072-24634108
64251 chrX 69712424 69712424 1 + C T UCEC 69712418 + 69712398 69712438 41 GAAAACTGTGAAGTTCCATGCCAGGACGGGGATGATTGAGT GAAAACTGTGAAGTTCCATGCCAGGATGGGGATGATTGAGT < 41bp 1 0.184808916711345 1 0.419523060321808 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DLG3 ENSG00000082458 CDS Human protein_coding chrX:69712418 chrX:69712424 nonsynonymous SNV 0.997 3 27 hm5C_associated_SNPs_43010 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:69712401-69712437
64251 chrX 21995204 21995204 1 + G T UCEC 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCCATAGTGCGAGGAGGATCCATCGACAGATACTGGCCCA < 41bp 1 0.214487924121787 1 0.384813070297241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995204 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_43011 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:21995200-21995220
64251 chr5 139917043 139917043 1 + C T UCEC 139917055 + 139917035 139917075 41 GATACCTCCCCCAATTGGAACAGAGAGACTGGCCCGAATTC GATACCTCTCCCAATTGGAACAGAGAGACTGGCCCGAATTC < 41bp 1 0.307483965638307 1 0.72403085231781 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917055 chr5:139917043 nonsynonymous SNV 0.948 3 9 hm5C_associated_SNPs_43012 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:139917021-139917046
64251 chr14 24634098 24634098 1 + C A UCEC 24634110 + 24634090 24634130 41 CACCTGGGCCAGGCCCGCATCTGCTGCCCAGCAACGAGTGC CACCTGGGACAGGCCCGCATCTGCTGCCCAGCAACGAGTGC < 41bp 1 0.564631523628623 1 0.364329755306244 experiment 0.870736952742753 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IRF9 ENSG00000213928 CDS Human protein_coding chr14:24634110 chr14:24634098 nonsynonymous SNV 0.759 2 9 hm5C_associated_SNPs_43013 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:24634072-24634108
64251 chr17 76061006 76061006 1 + C A UCEC 76061001 + 76060981 76061021 41 TGGCGCACCTGTTGCTGCCTCAGCCCTGTGCAAACCAGGTA TGGCGCACCTGTTGCTGCCTCAGCCATGTGCAAACCAGGTA < 41bp 1 0.246133274840363 1 0.21899026632309 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76061001 chr17:76061006 nonsynonymous SNV 0.995 2 26 hm5C_associated_SNPs_43015 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:76060977-76061015
64251 chr15 68583497 68583497 1 + G A UCEC 68583485 + 68583465 68583505 41 AAACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGA AAACTCAAATGAAGATGAGTCTCAAGTGCCTGACTGCCCGA < 41bp 1 0.793696445460909 1 0.922429859638214 experiment 0.412607109078182 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583485 chr15:68583497 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_43016 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583487 + 68583467 68583507 41 ACTCAAATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGC ACTCAAATGAAGATGAGTCTCAAGTGCCTGACTGCCCGAGC < 41bp 1 0.725579020084573 1 0.855011224746704 experiment 0.548841959830854 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583487 chr15:68583497 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_43017 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583493 + 68583473 68583513 41 ATGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCG ATGAAGATGAGTCTCAAGTGCCTGACTGCCCGAGCAGTTCG < 41bp 1 0.311961325214546 1 0.0596278309822083 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583493 chr15:68583497 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_43018 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583494 + 68583474 68583514 41 TGAAGATGAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGG TGAAGATGAGTCTCAAGTGCCTGACTGCCCGAGCAGTTCGG < 41bp 1 0.259558425695117 1 0.182042002677917 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583494 chr15:68583497 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_43019 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583501 + 68583481 68583521 41 GAGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATG GAGTCTCAAGTGCCTGACTGCCCGAGCAGTTCGGGCTAATG < 41bp 1 0.35982909198023 1 0.284038662910461 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583501 chr15:68583497 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_43020 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583502 + 68583482 68583522 41 AGTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGA AGTCTCAAGTGCCTGACTGCCCGAGCAGTTCGGGCTAATGA < 41bp 1 0.371888461623508 1 0.47824501991272 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583502 chr15:68583497 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_43021 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583503 + 68583483 68583523 41 GTCTCAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGAC GTCTCAAGTGCCTGACTGCCCGAGCAGTTCGGGCTAATGAC < 41bp 1 0.544895509358138 1 0.422917455434799 experiment 0.910208981283723 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583503 chr15:68583497 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_43022 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583507 + 68583487 68583527 41 CAAGTGCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTA CAAGTGCCTGACTGCCCGAGCAGTTCGGGCTAATGACATTA < 41bp 1 0.157615216967366 1 0.0636910200119019 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583507 chr15:68583497 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_43023 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr15 68583497 68583497 1 + G A UCEC 68583512 + 68583492 68583532 41 GCCTGGCTGCCCGAGCAGTTCGGGCTAATGACATTAACTAC GCCTGACTGCCCGAGCAGTTCGGGCTAATGACATTAACTAC < 41bp 1 0.729130941942016 1 0.758340001106262 experiment 0.541738116115968 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583512 chr15:68583497 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_43024 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68583424-68583656
64251 chr1 24022841 24022841 1 + G A UCEC 24022845 + 24022825 24022865 41 CTCTTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAAT CTCTTTCAGTATGATGAGATCATCCTTCCTGGCAAATAAAT < 41bp 1 0.0885803577476065 1 0.034270852804184 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022845 chr1:24022841 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_43025 0 0 30 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:24022814-24022968
64251 chr1 24022841 24022841 1 + G A UCEC 24022848 + 24022828 24022868 41 TTTCAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCC TTTCAGTATGATGAGATCATCCTTCCTGGCAAATAAATTCC < 41bp 1 0.0275606571158339 1 0.0607724785804749 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24022848 chr1:24022841 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_43026 0 0 30 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:24022814-24022968
64251 chr19 13051195 13051195 1 + C T UCEC 13051175 + 13051155 13051195 41 AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATC AGACGATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATT < 41bp 1 0.318127413358566 1 0.122254312038422 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051175 chr19:13051195 nonsynonymous SNV 0.997 2 41 hm5C_associated_SNPs_43027 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 13051195 13051195 1 + C T UCEC 13051210 + 13051190 13051230 41 AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGG AGGATTCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGG < 41bp 1 0.748537030441133 1 0.410296857357025 experiment 0.502925939117733 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051210 chr19:13051195 nonsynonymous SNV 0.997 2 6 hm5C_associated_SNPs_43028 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr1 228362929 228362929 1 + C T UCEC 228362945 + 228362925 228362965 41 TTGGCCAGGAGCTGACGGCCCGCACCCACCACATGGGCGTC TTGGTCAGGAGCTGACGGCCCGCACCCACCACATGGGCGTC < 41bp 1 0.2942790040309 1 0.038653165102005 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362945 chr1:228362929 synonymous SNV . 0 5 hm5C_associated_SNPs_43029 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:228362919-228362938
64251 chr1 155106000 155106000 1 + A T UCEC 155106004 + 155105984 155106024 41 CCCATCCACCAGCATGAAGACCGCTGCTTGAGGTTGAAGGT CCCATCCACCAGCATGTAGACCGCTGCTTGAGGTTGAAGGT < 41bp 1 0.200388976381544 1 0.123533844947815 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106004 chr1:155106000 nonsynonymous SNV 0.935 2 17 hm5C_associated_SNPs_43031 0 0 5 BUD13 POSTAR2 ENCODE chr1:155105924-155106018
64251 chr6 26045882 26045882 1 + G A UCEC 26045888 + 26045868 26045908 41 AGGACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGTG AGGACTTCAAAACCAACCTGCGTTTCCAGAGCTCTGCGGTG < 41bp 1 0.0582814922144967 1 0.0442266166210175 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H3C ENSG00000196532 CDS Human other chr6:26045888 chr6:26045882 nonsynonymous SNV 0.998 0 15 hm5C_associated_SNPs_43032 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr19 13002745 13002745 1 + G T UCEC 13002759 + 13002739 13002779 41 CTGCCAGGAGAGACTCATGCCTCGCATCCTGTTGGCCAATC CTGCCATGAGAGACTCATGCCTCGCATCCTGTTGGCCAATC < 41bp 1 0.576762919942688 1 0.244449704885483 experiment 0.846474160114623 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13002759 chr19:13002745 nonsynonymous SNV 0.992 3 7 hm5C_associated_SNPs_43033 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13002718-13002754
64251 chr8 143816765 143816765 1 + G A UCEC 143816777 + 143816757 143816797 41 AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACGAG AGCTGCCCACTGATCTGCAGCACTGGATCTCCTACAACGAG < 41bp 1 0.201035690325394 1 0.169612348079681 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THEM6 ENSG00000130193 CDS Human protein_coding chr8:143816777 chr8:143816765 nonsynonymous SNV 0.438 0 9 hm5C_associated_SNPs_43034 0 0 3 BUD13 POSTAR2 ENCODE chr8:143816714-143816773
64251 chr19 1036137 1036137 1 + T C UCEC 1036125 + 1036105 1036145 41 TCCCGGCCCCTTTCCCTCACCCAGGCCAAGACTAAGGGGCT TCCCGGCCCCTTTCCCTCACCCAGGCCAAGACCAAGGGGCT < 41bp 1 0.314783458066883 1 0.70249879360199 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036125 chr19:1036137 synonymous SNV . 0 33 hm5C_associated_SNPs_43035 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr19:1036120-1036140
64251 chr11 722468 722468 1 + C T UCEC 722478 + 722458 722498 41 TCCCGAGATGCCGTGGACTTCCTGCGCGGCCACCTGGTCCC TCCCGAGATGTCGTGGACTTCCTGCGCGGCCACCTGGTCCC < 41bp 1 0.270284528707235 1 0.129941076040268 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722478 chr11:722468 nonsynonymous SNV 0.017 1 11 hm5C_associated_SNPs_43036 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722448-722470
64251 chr7 151791328 151791328 1 + G T UCEC 151791339 + 151791319 151791359 41 AGTGTCACAGTTCGGTATTTCTGTTATGGGTGCCTTTTTAC AGTGTCACATTTCGGTATTTCTGTTATGGGTGCCTTTTTAC < 41bp 1 0.233106432726199 1 0.0547597110271454 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151791339 chr7:151791328 nonsynonymous SNV 0.998 1 10 hm5C_associated_SNPs_43037 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:151791319-151791331
64251 chrX 70519859 70519859 1 + C A UCEC 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTGGTGGAAATCCTCCTGCATTCAACCGTGCAGCT < 41bp 1 0.256496458680957 1 0.219072639942169 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519859 nonsynonymous SNV 1.000 0 16 hm5C_associated_SNPs_43038 0 0 49 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:70519820-70519860
64251 chr3 57994418 57994418 1 + G A UCEC 57994399 + 57994379 57994419 41 CTCAAGTGCGTGAACAAACGCATCGGCAACCTGCAGACCGA CTCAAGTGCGTGAACAAACGCATCGGCAACCTGCAGACCAA < 41bp 1 0.243557469781247 1 0.168918013572693 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:57994399 chr3:57994418 nonsynonymous SNV 0.998 5 40 hm5C_associated_SNPs_43039 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:57994418-57994419
64251 chr19 41306507 41306507 1 + A G UCEC 41306503 + 41306483 41306523 41 CAGCCCGTGCCAGCCGCAGCCCCTAAGTCAGGCTCTCCCTC CAGCCCGTGCCAGCCGCAGCCCCTGAGTCAGGCTCTCCCTC < 41bp 1 0.212136894138776 1 0.205751150846481 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306503 chr19:41306507 synonymous SNV . 0 25 hm5C_associated_SNPs_43040 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:41306485-41306509
64251 chrX 21995199 21995199 1 + G A UCEC 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCCATAGTGCGAGAAGGAGCCATCGACAGATACTGGCCCA < 41bp 1 0.161595556895989 1 0.271789491176605 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995199 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_43041 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:21995180-21995200
64251 chrX 106893244 106893244 1 + C A UCEC 106893248 + 106893228 106893268 41 CCGTTTCTTACCTATTCAGCCATGTCCCTTTATAATAGAGT CCGTTTCTTACCTATTAAGCCATGTCCCTTTATAATAGAGT < 41bp 1 0.0567063020110457 1 0.0808222591876984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893248 chrX:106893244 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_43042 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chrX 106893244 106893244 1 + C A UCEC 106893253 + 106893233 106893273 41 TCTTACCTATTCAGCCATGTCCCTTTATAATAGAGTAACTT TCTTACCTATTAAGCCATGTCCCTTTATAATAGAGTAACTT < 41bp 1 0.0733483328225044 1 0.0632898807525635 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106893253 chrX:106893244 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_43043 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:106893240-106893300
64251 chr2 224824674 224824674 1 + C T UCEC 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGGAGCTCTGTTACAGAGCAGTGGACCTGAGAGGACTGC < 41bp 1 0.512767296151875 1 0.184419721364975 experiment 0.974465407696251 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824674 synonymous SNV . 0 9 hm5C_associated_SNPs_43045 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:224824650-224824682
64251 chr22 38028088 38028088 1 + C T UCEC 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCTGACGTG < 41bp 1 0.407587387498002 1 0.171290010213852 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028088 synonymous SNV . 0 35 hm5C_associated_SNPs_43046 0 0 1 ZNF622 POSTAR2 ENCODE chr22:38028056-38028102
64251 chr2 224824670 224824670 1 + G T UCEC 224824686 + 224824666 224824706 41 ATTGGAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC ATTGTAGCCCTGTTACAGAGCAGTGGACCTGAGAGGACTGC < 41bp 1 0.455499221357814 1 0.359405755996704 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824686 chr2:224824670 nonsynonymous SNV 0.992 4 5 hm5C_associated_SNPs_43047 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:224824650-224824682
64251 chr12 52370259 52370259 1 + G T UCEC 52370279 + 52370259 52370299 41 GAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCT TAGACTGGACATGGAAGATCCCTCATGTGAGATGTGTCTCT < 41bp 1 0.223141618532338 1 0.506209790706635 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52370279 chr12:52370259 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_43048 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:52370230-52370260
64251 chrX 135291509 135291509 1 + C T UCEC 135291501 + 135291481 135291521 41 TCTCACCCTGTTTCCCAGCGCCAACCTCCGGGGCAGGCATC TCTCACCCTGTTTCCCAGCGCCAACCTCTGGGGCAGGCATC < 41bp 1 0.0730378223539875 1 0.236107856035233 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FHL1 ENSG00000022267 CDS Human protein_coding chrX:135291501 chrX:135291509 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_43049 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135291498-135291560
64251 chrX 135291509 135291509 1 + C T UCEC 135291502 + 135291482 135291522 41 CTCACCCTGTTTCCCAGCGCCAACCTCCGGGGCAGGCATCC CTCACCCTGTTTCCCAGCGCCAACCTCTGGGGCAGGCATCC < 41bp 1 0.181547881071307 1 0.160467505455017 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FHL1 ENSG00000022267 CDS Human protein_coding chrX:135291502 chrX:135291509 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_43050 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:135291498-135291560
64251 chr19 3207654 3207654 1 + C A UCEC 3207638 + 3207618 3207658 41 TGTCCCCAGCACTTCAGCCTCCTCTACAAGACCGTCCAGAG TGTCCCCAGCACTTCAGCCTCCTCTACAAGACCGTCAAGAG < 41bp 1 0.0634035631984 1 0.136086195707321 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NCLN ENSG00000125912 CDS Human protein_coding chr19:3207638 chr19:3207654 nonsynonymous SNV 0.682 0 37 hm5C_associated_SNPs_43052 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:3207640-3207660
64251 chr11 125442450 125442450 1 + C A UCEC 125442448 + 125442428 125442468 41 CTGACAGTGTCAAAACCTTTCTCCAGGACCTTGCCAGAGTG CTGACAGTGTCAAAACCTTTCTACAGGACCTTGCCAGAGTG < 41bp 1 0.782224543947681 1 0.892343282699585 experiment 0.435550912104637 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control EI24 ENSG00000149547 CDS Human protein_coding chr11:125442448 chr11:125442450 synonymous SNV . 0 23 hm5C_associated_SNPs_43057 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:125442422-125442460
64251 chrX 70519880 70519880 1 + C T UCEC 70519864 + 70519844 70519884 41 GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGCAGCT GGGCAATTGGTGGAACTCCTCCTGCATTCAACCGTGTAGCT < 41bp 1 0.213249863456487 1 0.238839566707611 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70519864 chrX:70519880 nonsynonymous SNV 1.000 0 37 hm5C_associated_SNPs_43058 0 0 48 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:70519729-70519929
64251 chr4 144336804 144336804 1 + T C UCEC 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTGAAAACAGCCACATTTTTGATATCAACAC < 41bp 1 0.327736211661857 1 0.0869315564632416 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336804 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_43059 0 0 1 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chr8 95835775 95835775 1 + G T UCEC 95835768 + 95835748 95835788 41 AGGAGTCACTGTTGGAGAAACATCTGCGCAAGCCCTGCCCG AGGAGTCACTGTTGGAGAAACATCTGCTCAAGCCCTGCCCG < 41bp 1 0.476627556664673 1 0.2525714635849 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95835768 chr8:95835775 nonsynonymous SNV 0.998 0 28 hm5C_associated_SNPs_43060 0 0 5 DDX24 POSTAR2 ENCODE chr8:95835732-95835790
64251 chr19 17313041 17313041 1 + C T UCEC 17313031 + 17313011 17313051 41 GAGCGTGGCCAGAAGGACACCAACCTGGTCCTCAACCTCTT GAGCGTGGCCAGAAGGACACCAACCTGGTCTTCAACCTCTT < 41bp 1 0.122996506636554 1 0.0811648368835449 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17313031 chr19:17313041 nonsynonymous SNV 0.997 5 31 hm5C_associated_SNPs_43061 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:17313038-17313061
64251 chr9 96420502 96420502 1 + C T UCEC 96420497 + 96420477 96420517 41 AAAATTCTCAATGGTGCTTTCCGATCGTGGACGAAGAAGCA AAAATTCTCAATGGTGCTTTCCGATTGTGGACGAAGAAGCA < 41bp 1 0.0944140541921921 1 0.566449463367462 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96420497 chr9:96420502 nonsynonymous SNV 0.981 0 26 hm5C_associated_SNPs_43062 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:96420479-96420514
64251 chr1 16260531 16260531 1 + C T UCEC 16260511 + 16260491 16260531 41 ACAGCACCTCCAGTGACAAACAACTCTGAGATACAAGCCTC ACAGCACCTCCAGTGACAAACAACTCTGAGATACAAGCCTT < 41bp 1 0.171355571773797 1 0.494388103485107 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SPEN ENSG00000065526 CDS Human protein_coding chr1:16260511 chr1:16260531 nonsynonymous SNV 0.034 1 41 hm5C_associated_SNPs_43064 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:16260440-16260703
64251 chr1 2160682 2160682 1 + G T UCEC 2160685 + 2160665 2160705 41 ACGGCCGACCAGCTGGAGATCCTCAAAGTCATGGGCATCCT ACGGCCGACCAGCTGGATATCCTCAAAGTCATGGGCATCCT < 41bp 1 0.305434021665495 1 0.0247483551502228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKI ENSG00000157933 CDS Human protein_coding chr1:2160685 chr1:2160682 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_43065 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2160644-2160687
64251 chr12 58109588 58109588 1 + C T UCEC 58109596 + 58109576 58109616 41 GACTACATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTA GACTACATCGATTGCGTGGACGAGCCCTTGTCCTGCTCTTA < 41bp 1 0.437772903798143 1 0.593159854412079 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OS9 ENSG00000135506 CDS Human protein_coding chr12:58109596 chr12:58109588 nonsynonymous SNV 0.523 4 13 hm5C_associated_SNPs_43066 0 0 8 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr12 58109588 58109588 1 + C T UCEC 58109602 + 58109582 58109622 41 ATCGATCGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT ATCGATTGCGTGGACGAGCCCTTGTCCTGCTCTTATGTGCT < 41bp 1 0.365681737795736 1 0.0663501024246216 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient OS9 ENSG00000135506 CDS Human protein_coding chr12:58109602 chr12:58109588 nonsynonymous SNV 0.523 4 7 hm5C_associated_SNPs_43067 0 0 8 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr1 231401139 231401139 1 + C A UCEC 231401132 + 231401112 231401152 41 TGGCAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAA TGGCAATAAACTCTACTGGGCTGTATTATCTGAATATGTAA < 41bp 1 0.380202021802445 1 0.044250100851059 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401132 chr1:231401139 nonsynonymous SNV 0.993 2 28 hm5C_associated_SNPs_43068 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:231401102-231401148
64251 chrX 73040666 73040666 1 - A T UCEC 73040659 - 73040639 73040679 41 AAGACTCTTGAACTTGTGAACTGATGTGAAATGCAGAATCT AAGACTCTTGAACATGTGAACTGATGTGAAATGCAGAATCT < 41bp 1 0.153797854378647 1 0.119292885065079 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040659 chrX:73040666 . . 0 14 hm5C_associated_SNPs_43075 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chrX 73040666 73040666 1 - A T UCEC 73040667 - 73040647 73040687 41 ATAAATGGAAGACTCTTGAACTTGTGAACTGATGTGAAATG ATAAATGGAAGACTCTTGAACATGTGAACTGATGTGAAATG < 41bp 1 0.107814678645206 1 0.133708208799362 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040667 chrX:73040666 . . 0 22 hm5C_associated_SNPs_43076 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chrX 73040666 73040666 1 - A T UCEC 73040673 - 73040653 73040693 41 GCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGATGT GCTAAGATAAATGGAAGACTCTTGAACATGTGAACTGATGT < 41bp 1 0.343806359739068 1 0.505150556564331 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040673 chrX:73040666 . . 0 28 hm5C_associated_SNPs_43077 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chrX 73040666 73040666 1 - A T UCEC 73040675 - 73040655 73040695 41 AAGCTAAGATAAATGGAAGACTCTTGAACTTGTGAACTGAT AAGCTAAGATAAATGGAAGACTCTTGAACATGTGAACTGAT < 41bp 1 0.0760571452349461 1 0.0728810429573059 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73040675 chrX:73040666 . . 0 30 hm5C_associated_SNPs_43078 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73040663-73040687
64251 chr11 33079499 33079499 1 + G T UCEC 33079509 + 33079489 33079529 41 GGTCATACTAGACTGAGAAACCAGATAACAGAAGTCTTGGA GGTCATACTATACTGAGAAACCAGATAACAGAAGTCTTGGA < 41bp 1 0.549313546098402 1 0.549352049827576 experiment 0.901372907803195 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33079509 chr11:33079499 nonsynonymous SNV 0.995 4 11 hm5C_associated_SNPs_43081 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:33079479-33079502
64251 chr3 52233274 52233274 1 + G A UCEC 52233278 + 52233258 52233298 41 ATGGAGAGTGTTGTTCGCCGCTGCCCATTCTTATCCCGAGT ATGGAGAGTGTTGTTCACCGCTGCCCATTCTTATCCCGAGT < 41bp 1 0.36807640693166 1 0.232151746749878 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233278 chr3:52233274 nonsynonymous SNV 0.997 2 17 hm5C_associated_SNPs_43082 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52233243-52233288
64251 chr16 3712061 3712061 1 - G A UCEC 3712045 - 3712025 3712065 41 CCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCG CCTGTGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCG < 41bp 1 0.270404306243476 1 0.229632198810577 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712045 chr16:3712061 nonsynonymous SNV 0.988 4 5 hm5C_associated_SNPs_43088 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr16 3712061 3712061 1 - G A UCEC 3712049 - 3712029 3712069 41 ACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAG ACTTCCTGTGCATGCAGCAGCTGGCCAAGACCCAGGAGGAG < 41bp 1 0.534217025315088 1 0.697154402732849 experiment 0.931565949369825 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712049 chr16:3712061 nonsynonymous SNV 0.988 4 9 hm5C_associated_SNPs_43089 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr16 3712061 3712061 1 - G A UCEC 3712064 - 3712044 3712084 41 TGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCC TGGGGGCTGCCCGCCACTTCCTGTGCATGCAGCAGCTGGCC < 41bp 1 0.779576849297374 1 0.434764921665192 experiment 0.440846301405251 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712064 chr16:3712061 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_43090 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr16 3712061 3712061 1 - G A UCEC 3712068 - 3712048 3712088 41 GAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCT GAGATGGGGGCTGCCCGCCACTTCCTGTGCATGCAGCAGCT < 41bp 1 0.313267104817583 1 0.447661906480789 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712068 chr16:3712061 nonsynonymous SNV 0.988 4 28 hm5C_associated_SNPs_43091 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr16 3712061 3712061 1 - G A UCEC 3712074 - 3712054 3712094 41 GTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCA GTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGTGCATGCA < 41bp 1 0.456860880066819 1 0.250251412391663 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712074 chr16:3712061 nonsynonymous SNV 0.988 4 34 hm5C_associated_SNPs_43092 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3712059-3712085
64251 chr5 153760010 153760010 1 + C T UCEC 153760024 + 153760004 153760044 41 TCAGACCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC TCAGACTGCATTGCTCGGAACCGCAAGACCATTGTGTGCCC < 41bp 1 0.367002462863115 1 0.102664142847061 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153760024 chr5:153760010 nonsynonymous SNV 0.997 3 7 hm5C_associated_SNPs_43094 0 0 3 DDX6 POSTAR2 ENCODE chr5:153760007-153760011
64251 chr3 58112438 58112438 1 + G A UCEC 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTCACACCGGGGGATTACGATGTTA < 41bp 1 0.502343391482786 1 0.0641097724437714 experiment 0.995313217034429 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112438 nonsynonymous SNV 0.901 1 20 hm5C_associated_SNPs_43095 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112438 58112438 1 + G A UCEC 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTCACACCGGGGGATTACGATGTTAAT < 41bp 1 0.267206813041801 1 0.355527222156525 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112438 nonsynonymous SNV 0.901 1 18 hm5C_associated_SNPs_43096 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr3 58112438 58112438 1 + G A UCEC 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTCACACCGGGGGATTACGATGTTAATA < 41bp 1 0.49384393953538 1 0.857243537902832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112438 nonsynonymous SNV 0.901 1 17 hm5C_associated_SNPs_43097 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:58112425-58112449
64251 chr16 30941547 30941547 1 + G A UCEC 30941537 + 30941517 30941557 41 TCTTCCTCCTCGGACTCAGACTCCGACTCCGACTCTTCGGG TCTTCCTCCTCGGACTCAGACTCCGACTCCAACTCTTCGGG < 41bp 1 0.455875438371962 1 0.80766361951828 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941537 chr16:30941547 nonsynonymous SNV 0.481 1 31 hm5C_associated_SNPs_43099 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30941518-30941558
64251 chr16 70564776 70564776 1 + G A UCEC 70564775 + 70564755 70564795 41 CATGTAGTTGGAGTAGATGTCGGATTTGAAAATCCAATGTT CATGTAGTTGGAGTAGATGTCAGATTTGAAAATCCAATGTT < 41bp 1 0.43148443546507 1 0.570985019207001 experiment 1 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70564775 chr16:70564776 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_43101 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70564708-70564825
64251 chr22 24717322 24717322 1 + G T UCEC 24717339 + 24717319 24717359 41 AAAGATTACGTGAACGTACCCGATTAAACCAGAGCAAAAAA AAATATTACGTGAACGTACCCGATTAAACCAGAGCAAAAAA < 41bp 1 0.0862471821403567 1 0.115522801876068 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SPECC1L ENSG00000100014;ENSG00000258555 CDS Human other chr22:24717339 chr22:24717322 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_43102 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:24717288-24717332
64251 chr4 99341223 99341223 1 + T G UCEC 99341204 + 99341184 99341224 41 AAGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGAAATT AAGATGTTATCAGCTGGGGTCACAGAGGCAGTTTTGAAAGT < 41bp 1 0.272624628930754 1 0.395879566669464 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAP1GDS1 ENSG00000138698 CDS Human protein_coding chr4:99341204 chr4:99341223 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_43103 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:99341223-99341248
64251 chr10 24816979 24816979 1 + C A UCEC 24816988 + 24816968 24817008 41 CAATACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTG CAATACCAAATATGGAGATGCCGCCAGCCACAGGCCCACTG < 41bp 1 0.130496763400815 1 0.182758897542953 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816988 chr10:24816979 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_43105 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr10 24816979 24816979 1 + C A UCEC 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATATGGAGATGCCGCCAGCCACAGGCCCACTGCCAA < 41bp 1 0.241748940114061 1 0.587010860443115 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24816979 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_43106 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr11 68115607 68115607 1 + G T UCEC 68115603 + 68115583 68115623 41 GAAGCTGTACTGGACGGACTCAGAGACCAACCGCATCGAGG GAAGCTGTACTGGACGGACTCAGATACCAACCGCATCGAGG < 41bp 1 0.441588780238535 1 0.708045721054077 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68115603 chr11:68115607 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_43107 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:68115573-68115607
64251 chr8 25323734 25323734 1 + G A UCEC 25323752 + 25323732 25323772 41 ACGAATATCAGCCTTCCAGTCAGCTTTTCACTCCATAAAGG ACAAATATCAGCCTTCCAGTCAGCTTTTCACTCCATAAAGG < 41bp 1 0.292883201664672 1 0.400552928447723 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25323752 chr8:25323734 nonsynonymous SNV 0.417 0 3 hm5C_associated_SNPs_43111 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:25323710-25323767
64251 chr12 93968548 93968548 1 + G T UCEC 93968564 + 93968544 93968584 41 AAAAGAGGCACCAGAAGGAACTTTCTTGATTAGAGATAGCT AAAATAGGCACCAGAAGGAACTTTCTTGATTAGAGATAGCT < 41bp 1 0.0514720783421116 1 0.109131187200546 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968564 chr12:93968548 stopgain 1.000 1 5 hm5C_associated_SNPs_43112 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:93968547-93968548
64251 chr22 42049642 42049642 1 + G A UCEC 42049622 + 42049602 42049642 41 ACACACCCCGCAGGAACATCCCTCCTTATTTTGTGGCTTTG ACACACCCCGCAGGAACATCCCTCCTTATTTTGTGGCTTTA < 41bp 1 0.0714755506589781 1 0.159080982208252 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42049622 chr22:42049642 synonymous SNV . 0 41 hm5C_associated_SNPs_43113 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:42049611-42049677
64251 chr22 42049642 42049642 1 + G A UCEC 42049626 + 42049606 42049646 41 ACCCCGCAGGAACATCCCTCCTTATTTTGTGGCTTTGGTGC ACCCCGCAGGAACATCCCTCCTTATTTTGTGGCTTTAGTGC < 41bp 1 0.14151889958761 1 0.0781862139701843 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42049626 chr22:42049642 synonymous SNV . 0 37 hm5C_associated_SNPs_43114 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:42049611-42049677
64251 chr6 30593467 30593467 1 + C A UCEC 30593484 + 30593464 30593504 41 CATCTCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCC CATATCCAAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCC < 41bp 1 0.100241978648727 1 0.0990270376205444 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593484 chr6:30593467 nonsynonymous SNV 0.777 2 4 hm5C_associated_SNPs_43115 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:30593440-30593500
64251 chr2 36691766 36691766 1 + G T UCEC 36691763 + 36691743 36691783 41 CTCTCGTGGCGATGGGACACCTGGAAAGTGCTGTGATGTCT CTCTCGTGGCGATGGGACACCTGTAAAGTGCTGTGATGTCT < 41bp 1 0.570588599517837 1 0.289806991815567 experiment 0.858822800964326 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36691763 chr2:36691766 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_43116 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:36691741-36691767
64251 chr2 160623812 160623812 1 + G A UCEC 160623826 + 160623806 160623846 41 GATTCCGAAGAAGACGGAGACCATAACAGGACATTTGATAT GATTCCAAAGAAGACGGAGACCATAACAGGACATTTGATAT < 41bp 1 0.298639352569206 1 0.182178944349289 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160623826 chr2:160623812 nonsynonymous SNV 0.976 1 7 hm5C_associated_SNPs_43117 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:160623785-160623841
64251 chr15 50782548 50782548 1 + C A UCEC 50782564 + 50782544 50782584 41 TCATCTGCACCTCCTTCCACCCCTCCAACTCATAAAGCCAA TCATATGCACCTCCTTCCACCCCTCCAACTCATAAAGCCAA < 41bp 1 0.0467188566814908 1 0.177874207496643 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50782564 chr15:50782548 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_43119 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:50782540-50782560
64251 chr5 162898226 162898226 1 + T G UCEC 162898209 + 162898189 162898229 41 AGTTTTCTGAAAATGGTAACCAGAAGAATTTGAGAATTCTA AGTTTTCTGAAAATGGTAACCAGAAGAATTTGAGAATGCTA < 41bp 1 0.689574506550189 1 0.788505077362061 experiment 0.620850986899621 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMMR ENSG00000072571 CDS Human protein_coding chr5:162898209 chr5:162898226 nonsynonymous SNV 0.995 1 38 hm5C_associated_SNPs_43120 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr5:162898204-162898231
64251 chr17 30372815 30372815 1 + T C UCEC 30372808 + 30372788 30372828 41 AGTCAAGCTGCATTGCAACACTGCATGTCTGACTAACAGCA AGTCAAGCTGCATTGCAACACTGCATGCCTGACTAACAGCA < 41bp 1 0.690433157120638 1 0.208802282810211 experiment 0.619133685758725 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30372808 chr17:30372815 synonymous SNV . 0 28 hm5C_associated_SNPs_43122 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:30372798-30372821
64251 chr1 39851498 39851498 1 + C T UCEC 39851491 + 39851471 39851511 41 CGAGGTTAAGGAGGCTCAGACACTGTGCGATGAACTCTCAG CGAGGTTAAGGAGGCTCAGACACTGTGTGATGAACTCTCAG < 41bp 1 0.164537007841234 1 0.335527658462524 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851491 chr1:39851498 synonymous SNV . 0 28 hm5C_associated_SNPs_43123 0 0 1 FXR2 POSTAR2 ENCODE chr1:39851462-39851518
64251 chr12 22214331 22214331 1 + C A UCEC 22214315 + 22214295 22214335 41 ACATTTATGTATCAGGAGACCAAAAAGAAATAATATCTTAT ACATTTATGTATCAGGAGACCAAAAAGAAATAATATATTAT < 41bp 1 0.364223069279066 1 0.527245461940765 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22214315 chr12:22214331 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_43126 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:22214299-22214336
64251 chr2 37475369 37475369 1 + G T UCEC 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGATA < 41bp 1 0.40909498303059 1 0.480537563562393 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475369 nonsynonymous SNV 0.997 3 40 hm5C_associated_SNPs_43127 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:37475369-37475383
64251 chr2 37475369 37475369 1 + G T UCEC 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGATAT < 41bp 1 0.421939278003884 1 0.397640526294708 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475369 nonsynonymous SNV 0.997 3 39 hm5C_associated_SNPs_43128 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:37475369-37475383
64251 chr1 6271147 6271147 1 + C T UCEC 6271142 + 6271122 6271162 41 GCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG GCCACTGCTGCTGCTGGGGCCACGTTGGGTGGCAGCTGCTG < 41bp 1 0.456523659648011 1 0.38383424282074 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF207 ENSG00000158286 CDS Human protein_coding chr1:6271142 chr1:6271147 nonsynonymous SNV 0.001 2 26 hm5C_associated_SNPs_43129 0 0 4 BUD13 POSTAR2 ENCODE chr1:6271143-6271204
64251 chr12 54394190 54394190 1 + C T UCEC 54394180 + 54394160 54394200 41 GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTA GCACGTCGTGGGCGCCCGTGCCCTCTCAGTTGTCCGTGGTA < 41bp 1 0.153204483657384 1 0.0518771708011627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394180 chr12:54394190 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_43131 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54394180-54394220
64251 chr20 44526710 44526710 1 + G A UCEC 44526703 + 44526683 44526723 41 GACAGCGGGGAGCAGATTGCCGGCTTCGTGAAGGAGTTCTC GACAGCGGGGAGCAGATTGCCGGCTTCATGAAGGAGTTCTC < 41bp 1 0.666038357846928 1 0.704003036022186 experiment 0.667923284306144 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44526703 chr20:44526710 nonsynonymous SNV 0.844 5 28 hm5C_associated_SNPs_43132 0 0 6 LIN28B POSTAR2 ENCODE chr20:44526646-44526711
64251 chr2 32640458 32640458 1 + C A UCEC 32640443 + 32640423 32640463 41 TCAGCAATTTGCAGATGCAGCAGCCAACCTTACCTCTCCGG TCAGCAATTTGCAGATGCAGCAGCCAACCTTACCTATCCGG < 41bp 1 0.09441244500271 1 0.531444787979126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640443 chr2:32640458 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_43133 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:32640439-32640469
64251 chr2 86360307 86360307 1 + G T UCEC 86360303 + 86360283 86360323 41 TTTTTGCCTTCATCACAGTTCCAAGTTCTTCGATTTGATTT TTTTTGCCTTCATCACAGTTCCAATTTCTTCGATTTGATTT < 41bp 1 0.0459322511967172 1 0.0226196050643921 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360303 chr2:86360307 nonsynonymous SNV 0.530 1 25 hm5C_associated_SNPs_43134 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:86360304-86360316
64251 chrX 47083814 47083814 1 + C A UCEC 47083794 + 47083774 47083814 41 CTGCCACCAGAGATTGTGCACGAGGACTTGAAGATGGGGTC CTGCCACCAGAGATTGTGCACGAGGACTTGAAGATGGGGTA < 41bp 1 0.677259785200945 1 0.902820408344269 experiment 0.64548042959811 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083794 chrX:47083814 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_43136 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:47083782-47083848
64251 chr7 127569264 127569264 1 + C A UCEC 127569246 + 127569226 127569266 41 TCTTTTCTCCATCAGGATACCCAAAAAGCAAAGCAGTTCCT TCTTTTCTCCATCAGGATACCCAAAAAGCAAAGCAGTTACT < 41bp 1 0.0741181303725526 1 0.175528883934021 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127569246 chr7:127569264 nonsynonymous SNV 0.995 1 39 hm5C_associated_SNPs_43138 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:127569253-127569285
64251 chr14 24900777 24900777 1 + G A UCEC 24900790 + 24900770 24900810 41 CTGCCTGGCCTGGAGCACGTCAGCCCATCTGGTGCCCAGGG CTGCCTGACCTGGAGCACGTCAGCCCATCTGGTGCCCAGGG < 41bp 1 0.469319496438166 1 0.331104785203934 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KHNYN ENSG00000100441 CDS Human protein_coding chr14:24900790 chr14:24900777 nonsynonymous SNV 0.722 0 8 hm5C_associated_SNPs_43139 0 0 5 GRSF1 POSTAR2 ENCODE chr14:24900769-24900806
64251 chr6 117037417 117037417 1 + G T UCEC 117037411 + 117037391 117037431 41 AAATTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGG AAATTCAAACAGACTCACAACAACAATAAATGCCGTGTGGG < 41bp 1 0.580246426854186 1 0.434971868991852 experiment 0.839507146291629 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117037411 chr6:117037417 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_43143 0 0 2 U2AF2 POSTAR2 ENCODE chr6:117037367-117037440
64251 chr16 5122980 5122980 1 + G T UCEC 5122983 + 5122963 5123003 41 CATGATGAGCTCTTGCAGAACAACAGAATTCAGATTGTGGG CATGATGAGCTCTTGCATAACAACAGAATTCAGATTGTGGG < 41bp 1 0.534935672640138 1 0.190896213054657 experiment 0.930128654719723 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5122983 chr16:5122980 nonsynonymous SNV 0.536 1 18 hm5C_associated_SNPs_43144 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:5122942-5123048
64251 chr12 124074982 124074982 1 + G A UCEC 124074965 + 124074945 124074985 41 GTAAAGCACGAACAGGAATACATGGAAGTCCGGGAGAGAAT GTAAAGCACGAACAGGAATACATGGAAGTCCGGGAGAAAAT < 41bp 1 0.626277821051376 1 0.236889630556107 experiment 0.747444357897247 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMED2 ENSG00000086598 CDS Human protein_coding chr12:124074965 chr12:124074982 nonsynonymous SNV 0.997 1 38 hm5C_associated_SNPs_43147 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124074899-124074984
64251 chr18 8635555 8635555 1 + C A UCEC 8635557 + 8635537 8635577 41 TCAGAAGATGCAGAGCTTCTCTTAGTTGGAAATAAGTTGGA TCAGAAGATGCAGAGCTTATCTTAGTTGGAAATAAGTTGGA < 41bp 1 0.514228758067397 1 0.4312943816185 experiment 0.971542483865206 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RAB12 ENSG00000206418 CDS Human protein_coding chr18:8635557 chr18:8635555 nonsynonymous SNV 0.988 0 19 hm5C_associated_SNPs_43148 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:8635530-8635564
64251 chr6 116565144 116565144 1 + C A UCEC 116565147 + 116565127 116565167 41 TGGCTACTATCCAAATCCTCCACTGGTCTTATCAAGTGATG TGGCTACTATCCAAATCATCCACTGGTCTTATCAAGTGATG < 41bp 1 0.263187579325173 1 0.0264369249343872 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116565147 chr6:116565144 nonsynonymous SNV 0.101 2 18 hm5C_associated_SNPs_43149 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr6:116565129-116565151
64251 chr3 4776945 4776945 1 + C T UCEC 4776929 + 4776909 4776949 41 TCACCTTGACAAGGAGGGGGCTTCCAATCTAGTTATCGACC TCACCTTGACAAGGAGGGGGCTTCCAATCTAGTTATTGACC < 41bp 1 0.0183997558300573 1 0.0732423961162567 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4776929 chr3:4776945 synonymous SNV . 0 37 hm5C_associated_SNPs_43150 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr3:4776929-4776950
64251 chr1 24782719 24782719 1 + C T UCEC 24782707 + 24782687 24782727 41 GGGAACCTGCAGCTTGACTACCCCATCTTCTACGTGATGTT GGGAACCTGCAGCTTGACTACCCCATCTTCTATGTGATGTT < 41bp 1 0.439848832723351 1 0.200465828180313 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24782707 chr1:24782719 synonymous SNV . 0 33 hm5C_associated_SNPs_43157 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:24782699-24782725
64251 chr16 30664155 30664155 1 + G A UCEC 30664142 + 30664122 30664162 41 TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCGCAGGCCA TGCCTCGCCACCCCGGCAGGCCGGGTGGTCCTCACAGGCCA < 41bp 1 0.685568897751901 1 0.543845474720001 experiment 0.628862204496197 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRR14 ENSG00000156858 CDS Human protein_coding chr16:30664142 chr16:30664155 synonymous SNV . 0 34 hm5C_associated_SNPs_43158 0 0 2 PPIG POSTAR2 ENCODE chr16:30664094-30664159
64251 chr15 90771602 90771602 1 + C T UCEC 90771587 + 90771567 90771607 41 TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTCCTGAA TTGCTCTACCGGCACCGGAACAGCATGAAAGTCTTTCTGAA < 41bp 1 0.591767258340103 1 0.712498307228088 experiment 0.816465483319793 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771587 chr15:90771602 synonymous SNV . 0 36 hm5C_associated_SNPs_43159 0 0 1 RBM15 POSTAR2 ENCODE chr15:90771556-90771614
64251 chr5 140084151 140084151 1 + G T UCEC 140084145 + 140084125 140084165 41 TTGAGGAAAGGATGAAGGAGCTCAGAGAAGAGGTAAGGGTC TTGAGGAAAGGATGAAGGAGCTCAGATAAGAGGTAAGGGTC < 41bp 1 0.618048449423046 1 0.493384122848511 experiment 0.763903101153908 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084145 chr5:140084151 stopgain 0.999 1 27 hm5C_associated_SNPs_43160 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr5 140084151 140084151 1 + G T UCEC 140084147 + 140084127 140084167 41 GAGGAAAGGATGAAGGAGCTCAGAGAAGAGGTAAGGGTCTC GAGGAAAGGATGAAGGAGCTCAGATAAGAGGTAAGGGTCTC < 41bp 1 0.632416496262203 1 0.41048589348793 experiment 0.735167007475593 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140084147 chr5:140084151 stopgain 0.999 1 25 hm5C_associated_SNPs_43161 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:140084079-140084154
64251 chr6 33657073 33657073 1 + C T UCEC 33657075 + 33657055 33657095 41 CCTCATCTGCTTCTCCATCGCGGCCCTGTTCACCAAGCGCT CCTCATCTGCTTCTCCATTGCGGCCCTGTTCACCAAGCGCT < 41bp 1 0.193716200744171 1 0.47996786236763 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33657075 chr6:33657073 synonymous SNV . 0 19 hm5C_associated_SNPs_43162 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:33657052-33657081
64251 chr17 48631725 48631725 1 + G A UCEC 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCACCTTTTCCGAGCGCATGCGTCG < 41bp 1 0.0545949277485065 1 0.0153005719184875 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631725 nonsynonymous SNV 0.779 1 19 hm5C_associated_SNPs_43163 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr5 7885875 7885875 1 + C A UCEC 7885861 + 7885841 7885881 41 GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGT GATGCCTTCAGCGTGATCTGCCCTAACAGTGATTATGAGGT < 41bp 1 0.210390996606038 1 0.0861481726169586 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885861 chr5:7885875 nonsynonymous SNV 0.802 1 35 hm5C_associated_SNPs_43165 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr5 7885875 7885875 1 + C A UCEC 7885862 + 7885842 7885882 41 ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTA ATGCCTTCAGCGTGATCTGCCCTAACAGTGATTATGAGGTA < 41bp 1 0.186971433818721 1 0.139536172151566 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885862 chr5:7885875 nonsynonymous SNV 0.802 1 34 hm5C_associated_SNPs_43166 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr5 7885875 7885875 1 + C A UCEC 7885863 + 7885843 7885883 41 TGCCTTCAGCGTGATCTGCCCTAACAGTGATTCTGAGGTAC TGCCTTCAGCGTGATCTGCCCTAACAGTGATTATGAGGTAC < 41bp 1 0.271754026761663 1 0.0892837941646576 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885863 chr5:7885875 nonsynonymous SNV 0.802 1 33 hm5C_associated_SNPs_43167 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:7885860-7885880
64251 chr2 70096887 70096887 1 + G A UCEC 70096880 + 70096860 70096900 41 CGTTGGACAGGTTTTAACTTCGGCTTCGACCTACTTGTAAC CGTTGGACAGGTTTTAACTTCGGCTTCAACCTACTTGTAAC < 41bp 1 0.548186443547156 1 0.456648886203766 experiment 0.903627112905687 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096880 chr2:70096887 nonsynonymous SNV 0.940 3 28 hm5C_associated_SNPs_43169 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:70096870-70096895
64251 chr2 242683168 242683168 1 + G A UCEC 242683180 + 242683160 242683200 41 CAACCAACGCTGGAGGCCTGCGGTTTCTTCGATATGGCTCA CAACCAACACTGGAGGCCTGCGGTTTCTTCGATATGGCTCA < 41bp 1 0.285014815036779 1 0.652176916599274 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242683180 chr2:242683168 nonsynonymous SNV 0.013 5 9 hm5C_associated_SNPs_43170 0 0 2 PPIG POSTAR2 ENCODE chr2:242683054-242683176
64251 chr1 20224099 20224099 1 + G A UCEC 20224116 + 20224096 20224136 41 TACGACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACC TACAACAGTGTTCGGAGGATCAATGACAACTCAGAGGCACC < 41bp 1 0.247998536123173 1 0.369145572185516 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20224116 chr1:20224099 nonsynonymous SNV 0.992 1 4 hm5C_associated_SNPs_43171 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:20224048-20224147
64251 chr2 232577534 232577534 1 + G T UCEC 232577531 + 232577511 232577551 41 TAGGATGACGATGTCGATACCAAGAAGCAGAAGACCGACGA TAGGATGACGATGTCGATACCAATAAGCAGAAGACCGACGA < 41bp 1 0.53210318325851 1 0.179170936346054 experiment 0.935793633482979 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232577531 chr2:232577534 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_43172 0 0 10 GRWD1 POSTAR2 ENCODE chr2:232577513-232577552
64251 chr1 109801266 109801266 1 + G A UCEC 109801267 + 109801247 109801287 41 CGTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCA CGTACAGCGGGACACCGACACCCCCGGGGGCCACATCCTCA < 41bp 1 0.0801665755780234 1 0.0383744835853577 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801267 chr1:109801266 nonsynonymous SNV 0.062 1 20 hm5C_associated_SNPs_43174 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801266 109801266 1 + G A UCEC 109801268 + 109801248 109801288 41 GTACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAA GTACAGCGGGACACCGACACCCCCGGGGGCCACATCCTCAA < 41bp 1 0.359314776300339 1 0.360740780830383 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801268 chr1:109801266 nonsynonymous SNV 0.062 1 19 hm5C_associated_SNPs_43175 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801266 109801266 1 + G A UCEC 109801269 + 109801249 109801289 41 TACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAAC TACAGCGGGACACCGACACCCCCGGGGGCCACATCCTCAAC < 41bp 1 0.402532149504855 1 0.43428236246109 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801269 chr1:109801266 nonsynonymous SNV 0.062 1 18 hm5C_associated_SNPs_43176 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801266 109801266 1 + G A UCEC 109801270 + 109801250 109801290 41 ACAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACG ACAGCGGGACACCGACACCCCCGGGGGCCACATCCTCAACG < 41bp 1 0.480113197163401 1 0.482181340456009 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801270 chr1:109801266 nonsynonymous SNV 0.062 1 17 hm5C_associated_SNPs_43177 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr1 109801266 109801266 1 + G A UCEC 109801271 + 109801251 109801291 41 CAGCGGGACACCGACGCCCCCGGGGGCCACATCCTCAACGT CAGCGGGACACCGACACCCCCGGGGGCCACATCCTCAACGT < 41bp 1 0.713735912832026 1 0.886974036693573 experiment 0.572528174335948 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801271 chr1:109801266 nonsynonymous SNV 0.062 1 16 hm5C_associated_SNPs_43178 0 0 1 FXR2 POSTAR2 ENCODE chr1:109801250-109801301
64251 chr15 91492578 91492578 1 + G T UCEC 91492589 + 91492569 91492609 41 TCGGGTGAAGAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCA TCGGGTGAATAAGCTGCTGGCAGCGGGTGTGGTGTCGGCCA < 41bp 1 0.760936514556977 1 0.726634323596954 experiment 0.478126970886045 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492589 chr15:91492578 nonsynonymous SNV 1.000 0 10 hm5C_associated_SNPs_43180 0 0 3 FMR1 POSTAR2 ENCODE chr15:91492545-91492663
64251 chr1 12009963 12009963 1 + G T UCEC 12009955 + 12009935 12009975 41 GAGGATCTGGTCATTCTCTTCGCAGACAGGTAGGTGGGTCA GAGGATCTGGTCATTCTCTTCGCAGACATGTAGGTGGGTCA < 41bp 1 0.513179909748125 1 0.829998016357422 experiment 0.97364018050375 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLOD1 ENSG00000083444 CDS Human protein_coding chr1:12009955 chr1:12009963 nonsynonymous SNV 0.980 3 29 hm5C_associated_SNPs_43181 0 0 3 DDX24 POSTAR2 ENCODE chr1:12009877-12009966
64251 chr19 39664348 39664348 1 + G A UCEC 39664336 + 39664316 39664356 41 GTGCCCCCAGCCCTGGAGTGCTGGGACCCCACGCCTCAGAG GTGCCCCCAGCCCTGGAGTGCTGGGACCCCACACCTCAGAG < 41bp 1 0.773896179157386 1 0.647995710372925 experiment 0.452207641685228 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PAK4 ENSG00000130669 CDS Human protein_coding chr19:39664336 chr19:39664348 nonsynonymous SNV 0.883 1 33 hm5C_associated_SNPs_43182 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:39664333-39664354
64251 chr11 45924000 45924000 1 + G T UCEC 45923984 + 45923964 45924004 41 GAGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCG GAGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACATATCG < 41bp 1 0.0635950392533403 1 0.0760771930217743 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923984 chr11:45924000 nonsynonymous SNV 0.817 3 37 hm5C_associated_SNPs_43183 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923985 + 45923965 45924005 41 AGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGA AGCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACATATCGA < 41bp 1 0.0620719126179912 1 0.0857259631156921 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923985 chr11:45924000 nonsynonymous SNV 0.817 3 36 hm5C_associated_SNPs_43184 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923986 + 45923966 45924006 41 GCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAG GCTGCCCCCCCAGAGCGGCCCCGCCCCCACCACATATCGAG < 41bp 1 0.055655346214421 1 0.0861335098743439 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923986 chr11:45924000 nonsynonymous SNV 0.817 3 35 hm5C_associated_SNPs_43185 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923987 + 45923967 45924007 41 CTGCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGG CTGCCCCCCCAGAGCGGCCCCGCCCCCACCACATATCGAGG < 41bp 1 0.118240530514913 1 0.262667953968048 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923987 chr11:45924000 nonsynonymous SNV 0.817 3 34 hm5C_associated_SNPs_43186 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923989 + 45923969 45924009 41 GCCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCA GCCCCCCCAGAGCGGCCCCGCCCCCACCACATATCGAGGCA < 41bp 1 0.0716952567764008 1 0.227397888898849 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923989 chr11:45924000 nonsynonymous SNV 0.817 3 32 hm5C_associated_SNPs_43187 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923990 + 45923970 45924010 41 CCCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCAC CCCCCCCAGAGCGGCCCCGCCCCCACCACATATCGAGGCAC < 41bp 1 0.279477010378277 1 0.632889688014984 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923990 chr11:45924000 nonsynonymous SNV 0.817 3 31 hm5C_associated_SNPs_43188 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923991 + 45923971 45924011 41 CCCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACC CCCCCCAGAGCGGCCCCGCCCCCACCACATATCGAGGCACC < 41bp 1 0.0669437884468998 1 0.0982395708560944 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923991 chr11:45924000 nonsynonymous SNV 0.817 3 30 hm5C_associated_SNPs_43189 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923992 + 45923972 45924012 41 CCCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACCT CCCCCAGAGCGGCCCCGCCCCCACCACATATCGAGGCACCT < 41bp 1 0.041603739793537 1 0.149656772613525 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923992 chr11:45924000 nonsynonymous SNV 0.817 3 29 hm5C_associated_SNPs_43190 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr11 45924000 45924000 1 + G T UCEC 45923993 + 45923973 45924013 41 CCCCAGAGCGGCCCCGCCCCCACCACAGATCGAGGCACCTC CCCCAGAGCGGCCCCGCCCCCACCACATATCGAGGCACCTC < 41bp 1 0.723700842308973 1 0.297372996807098 experiment 0.552598315382053 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK8IP1 ENSG00000121653 CDS Human protein_coding chr11:45923993 chr11:45924000 nonsynonymous SNV 0.817 3 28 hm5C_associated_SNPs_43191 0 0 1 DGCR8 POSTAR2 ENCODE chr11:45923977-45924022
64251 chr5 43649356 43649356 1 + G T UCEC 43649344 + 43649324 43649364 41 TGGCTGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACC TGGCTGGCATTGTGGGGTATCATACCGTCTGGTGAGTGACC < 41bp 1 0.0932521013708609 1 0.0896016955375671 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43649344 chr5:43649356 stopgain 0.995 1 33 hm5C_associated_SNPs_43192 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr5:43649340-43649359
64251 chr5 43649356 43649356 1 + G T UCEC 43649348 + 43649328 43649368 41 TGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACCCCTG TGGCATTGTGGGGTATCATACCGTCTGGTGAGTGACCCCTG < 41bp 1 0.247263719360223 1 0.465058088302612 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43649348 chr5:43649356 stopgain 0.995 1 29 hm5C_associated_SNPs_43193 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr5:43649340-43649359
64251 chr5 231085 231085 1 + G T UCEC 231073 + 231053 231093 41 CCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAG CCATGATCACCAGGGCAGGCCTTCCTTGCCAGTACCTAGAG < 41bp 1 0.236902818720444 1 0.181193768978119 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SDHA ENSG00000073578 CDS Human protein_coding chr5:231073 chr5:231085 nonsynonymous SNV 0.864 3 33 hm5C_associated_SNPs_43195 0 0 4 RPS3 POSTAR2 ENCODE chr5:230990-231097
64251 chr8 22054840 22054840 1 + G A UCEC 22054839 + 22054819 22054859 41 TTCTGTGGTTCTGAGAAGCCCGAGGTCATCACCTCCCAGTA TTCTGTGGTTCTGAGAAGCCCAAGGTCATCACCTCCCAGTA < 41bp 1 0.689630504202621 1 0.792672634124756 experiment 0.620738991594758 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054839 chr8:22054840 nonsynonymous SNV 0.984 2 22 hm5C_associated_SNPs_43196 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chr8 22054840 22054840 1 + G A UCEC 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCCAAGGTCATCACCTCCCAGTACAACAACATGCGCG < 41bp 1 0.126339833362491 1 0.190434902906418 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054840 nonsynonymous SNV 0.984 2 8 hm5C_associated_SNPs_43197 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chr2 86947841 86947841 1 + G T UCEC 86947846 + 86947826 86947866 41 GAAGGTGCTGCACAAGTTCTCAGGCTACGGGCAGCTGTGCG GAAGGTGCTGCACAATTTCTCAGGCTACGGGCAGCTGTGCG < 41bp 1 0.740005450625714 1 0.97242796421051 experiment 0.519989098748572 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control RMND5A ENSG00000153561 CDS Human protein_coding chr2:86947846 chr2:86947841 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_43198 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:86947827-86947847
64251 chr17 42426655 42426655 1 + C T UCEC 42426663 + 42426643 42426683 41 CAGCTACAGCTGCTGCCGTCCCCTTCTGGTGAGTGCCCCTC CAGCTACAGCTGTTGCCGTCCCCTTCTGGTGAGTGCCCCTC < 41bp 1 0.0972477081564693 1 0.0524072647094727 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42426663 chr17:42426655 synonymous SNV . 0 13 hm5C_associated_SNPs_43199 0 0 9 DROSHA POSTAR2 ENCODE chr17:42426525-42426666
64251 chr17 42426655 42426655 1 + C T UCEC 42426664 + 42426644 42426684 41 AGCTACAGCTGCTGCCGTCCCCTTCTGGTGAGTGCCCCTCA AGCTACAGCTGTTGCCGTCCCCTTCTGGTGAGTGCCCCTCA < 41bp 1 0.0637974004451894 1 0.243425726890564 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRN ENSG00000030582 CDS Human protein_coding chr17:42426664 chr17:42426655 synonymous SNV . 0 12 hm5C_associated_SNPs_43200 0 0 9 DROSHA POSTAR2 ENCODE chr17:42426525-42426666
64251 chr2 128861522 128861522 1 + G T UCEC 128861524 + 128861504 128861544 41 AGTGAGTTTTTAGCAGAAGACAGTCAAGAGAAATTTTGGAA AGTGAGTTTTTAGCAGAATACAGTCAAGAGAAATTTTGGAA < 41bp 1 0.0788602613324061 1 0.175419926643372 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UGGT1 ENSG00000136731 CDS Human protein_coding chr2:128861524 chr2:128861522 nonsynonymous SNV 1.000 2 19 hm5C_associated_SNPs_43202 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:128861503-128861532
64251 chr12 94072698 94072698 1 + G T UCEC 94072701 + 94072681 94072721 41 TCAATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTG TCAATGCTCAAACCACATGCCTCCGGAAAACAATGCTCCTG < 41bp 1 0.606631329563114 1 0.709474086761475 experiment 0.786737340873771 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072701 chr12:94072698 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_43203 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr12 94072698 94072698 1 + G T UCEC 94072703 + 94072683 94072723 41 AATGCTCAAACCACAGGCCTCCGGAAAACAATGCTCCTGCT AATGCTCAAACCACATGCCTCCGGAAAACAATGCTCCTGCT < 41bp 1 0.627553901547225 1 0.622136473655701 experiment 0.744892196905551 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRADD ENSG00000169372 CDS Human protein_coding chr12:94072703 chr12:94072698 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_43204 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072686-94072715
64251 chr12 6637436 6637436 1 + G A UCEC 6637450 + 6637430 6637470 41 ACTGGGGATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC ACTGGGAATCTGGCCATCCGCTTTCCCAATCTGGTGGACCC < 41bp 1 0.0991492820367898 1 0.0578273236751556 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6637450 chr12:6637436 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_43207 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:6637390-6637461
64251 chr16 56362599 56362599 1 + C A UCEC 56362604 + 56362584 56362624 41 AGACACCGAGCCCTTCTCTGCAGAGCTGCTTTCTGCCATGA AGACACCGAGCCCTTATCTGCAGAGCTGCTTTCTGCCATGA < 41bp 1 0.499746880884792 1 0.730260848999023 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control GNAO1 ENSG00000087258 CDS Human protein_coding chr16:56362604 chr16:56362599 nonsynonymous SNV 0.998 2 16 hm5C_associated_SNPs_43208 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:56362591-56362618
64251 chr5 162905778 162905778 1 + C A UCEC 162905772 + 162905752 162905792 41 AAAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACT AAAAGTATGACAGTATGGTGCAAAGCATTGAAGATGTTACT < 41bp 1 0.348666148390411 1 0.239560157060623 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HMMR ENSG00000072571 CDS Human protein_coding chr5:162905772 chr5:162905778 nonsynonymous SNV 0.004 2 27 hm5C_associated_SNPs_43209 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:162905745-162905789
64251 chr12 51449973 51449973 1 + G T UCEC 51449969 + 51449949 51449989 41 CAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTAAC CAATACATGATATCTTGGCTCTGATAGAGTGTTTCTCTAAC < 41bp 1 0.394407649489981 1 0.0911135971546173 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449969 chr12:51449973 nonsynonymous SNV 0.290 2 25 hm5C_associated_SNPs_43210 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:51449952-51449980
64251 chr22 42032192 42032192 1 + G A UCEC 42032200 + 42032180 42032220 41 TTCTATGGTACCGAGAAAGACAAAAATTCAGTGAATTTTAA TTCTATGGTACCAAGAAAGACAAAAATTCAGTGAATTTTAA < 41bp 1 0.444387374916222 1 0.368028342723846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032200 chr22:42032192 nonsynonymous SNV 0.675 0 13 hm5C_associated_SNPs_43211 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr22:42032120-42032195
64251 chr14 102499719 102499719 1 + C T UCEC 102499701 + 102499681 102499721 41 GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATCCG GACAACCAGCAGAAGGCCAACGAGGTGGAGCAGATGATTCG < 41bp 1 0.279291463480954 1 0.724425196647644 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499701 chr14:102499719 synonymous SNV . 0 39 hm5C_associated_SNPs_43212 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr14 102499719 102499719 1 + C T UCEC 102499720 + 102499700 102499740 41 ACGAGGTGGAGCAGATGATCCGAGACCTGGAAGCCAGCATC ACGAGGTGGAGCAGATGATTCGAGACCTGGAAGCCAGCATC < 41bp 1 0.576232463983952 1 0.858805179595947 experiment 0.847535072032096 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102499720 chr14:102499719 synonymous SNV . 0 20 hm5C_associated_SNPs_43213 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr14:102499692-102499721
64251 chr7 74103466 74103466 1 + G A UCEC 74103486 + 74103466 74103506 41 GCCCAAGTTGCAATGTCCACCCTCCCCGTTGAAGATGAGGA ACCCAAGTTGCAATGTCCACCCTCCCCGTTGAAGATGAGGA < 41bp 1 0.0277625092314064 1 0.113113313913345 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF2I ENSG00000077809 CDS Human other chr7:74103486 chr7:74103466 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_43214 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:74103460-74103480
64251 chr14 73407009 73407009 1 + C T UCEC 73406995 + 73406975 73407015 41 TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGA TTGCTCCCTGGACATAACAACTGCAACCCCCTGATGAAAGA < 41bp 1 0.691673929516314 1 0.39204216003418 experiment 0.616652140967372 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73406995 chr14:73407009 nonsynonymous SNV 0.761 4 35 hm5C_associated_SNPs_43215 0 0 2 PPIG POSTAR2 ENCODE chr14:73407008-73407092
64251 chr17 34958427 34958427 1 + A G UCEC 34958431 + 34958411 34958451 41 TGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTCTGTGGCCCG TGTCTCCTGGCTCTGCGGGCCGCCCGCCGCTCTGTGGCCCG < 41bp 1 0.405088989461051 1 0.159519553184509 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MRM1 ENSG00000129282 CDS Human other chr17:34958431 chr17:34958427 nonsynonymous SNV 0.960 0 17 hm5C_associated_SNPs_43218 0 0 1 RBM15 POSTAR2 ENCODE chr17:34958413-34958455
64251 chr19 42373816 42373816 1 + C G UCEC 42373808 + 42373788 42373828 41 CAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTAAG CAGGGACAAAGAGATCTGGACAGAATCGGCGGACAGGTAAG < 41bp 1 0.626334527380212 1 0.33413553237915 experiment 0.747330945239577 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373808 chr19:42373816 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_43219 0 0 50 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:42373760-42373820
64251 chr17 41154751 41154751 1 + G T UCEC 41154768 + 41154748 41154788 41 CCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAA CCTTCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAA < 41bp 1 0.251997754711993 1 0.35940757393837 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL27 ENSG00000131469 CDS Human protein_coding chr17:41154768 chr17:41154751 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_43220 0 0 40 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:41154680-41154760
64251 chr11 46388885 46388885 1 + C T UCEC 46388894 + 46388874 46388914 41 GGCCCCCCCTCCGCCCACCCCTGGGGCCCCGTGCAGCGAGT GGCCCCCCCTCTGCCCACCCCTGGGGCCCCGTGCAGCGAGT < 41bp 1 0.770429658143035 1 0.758750438690186 experiment 0.45914068371393 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DGKZ ENSG00000149091 CDS Human protein_coding chr11:46388894 chr11:46388885 nonsynonymous SNV 0.252 2 12 hm5C_associated_SNPs_43221 0 0 2 DDX24 POSTAR2 ENCODE chr11:46388857-46388946
64251 chr11 46394434 46394434 1 + G A UCEC 46394414 + 46394394 46394434 41 GTACTGGCAACGACTTGGCCCGAACCCTCAACTGGGGTGGG GTACTGGCAACGACTTGGCCCGAACCCTCAACTGGGGTGGA < 41bp 1 0.11194305252363 1 0.0396721363067627 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46394414 chr11:46394434 synonymous SNV . 0 41 hm5C_associated_SNPs_43224 0 0 1 PRPF8 POSTAR2 ENCODE chr11:46394420-46394520
64251 chr11 46394434 46394434 1 + G A UCEC 46394418 + 46394398 46394438 41 TGGCAACGACTTGGCCCGAACCCTCAACTGGGGTGGGGTAA TGGCAACGACTTGGCCCGAACCCTCAACTGGGGTGGAGTAA < 41bp 1 0.0681544129005573 1 0.319894909858704 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGKZ ENSG00000149091 CDS Human protein_coding chr11:46394418 chr11:46394434 synonymous SNV . 0 37 hm5C_associated_SNPs_43225 0 0 1 PRPF8 POSTAR2 ENCODE chr11:46394420-46394520
64251 chr14 93119172 93119172 1 + C T UCEC 93119189 + 93119169 93119209 41 ACGCTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTG ACGTTTTCCTCTCCAACAACCGCAAGCTGTACAAGAAGGTG < 41bp 1 0.394208330917766 1 0.260524243116379 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RIN3 ENSG00000100599 CDS Human protein_coding chr14:93119189 chr14:93119172 nonsynonymous SNV 0.134 1 4 hm5C_associated_SNPs_43226 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:93119171-93119190
64251 chr7 72397373 72397373 1 + A G UCEC 72397355 + 72397335 72397375 41 TGTAGACCAGAGCAGATAATCAGCTCAACACTGTCCTCACC TGTAGACCAGAGCAGATAATCAGCTCAACACTGTCCTCGCC < 41bp 1 0.414159250918824 1 0.871983051300049 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POM121 ENSG00000196313 CDS Human protein_coding chr7:72397355 chr7:72397373 synonymous SNV . 0 39 hm5C_associated_SNPs_43227 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:72397332-72397396
64251 chr2 113277929 113277929 1 + G A UCEC 113277937 + 113277917 113277957 41 TTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGCT TTCCAGCTCTTCAGCTTTGACTTCATGGTCGATGAGGAGCT < 41bp 1 0.732181386914815 1 0.667361617088318 experiment 0.535637226170371 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113277937 chr2:113277929 nonsynonymous SNV 0.995 4 13 hm5C_associated_SNPs_43228 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:113277902-113277931
64251 chrX 41088615 41088615 1 + A C UCEC 41088595 + 41088575 41088615 41 GAATCACTATCAAAAAAGAGCATACCAGTGTATAAAATGTA GAATCACTATCAAAAAAGAGCATACCAGTGTATAAAATGTC < 41bp 1 0.00632462332199859 1 0.103228688240051 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41088595 chrX:41088615 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_43229 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41088604-41088629
64251 chr19 55817714 55817714 1 + G A UCEC 55817715 + 55817695 55817735 41 GTCTTCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTC GTCTTCCAAAAGCCCGTCCACTTCCAGGTGGACATCAGCTC < 41bp 1 0.143171157933951 1 0.118593096733093 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817715 chr19:55817714 nonsynonymous SNV 0.994 3 20 hm5C_associated_SNPs_43230 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr19 55817714 55817714 1 + G A UCEC 55817719 + 55817699 55817739 41 TCCAAAAGCCCGTCCGCTTCCAGGTGGACATCAGCTCCTCT TCCAAAAGCCCGTCCACTTCCAGGTGGACATCAGCTCCTCT < 41bp 1 0.730347366988553 1 0.957031071186066 experiment 0.539305266022895 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control BRSK1 ENSG00000160469 CDS Human protein_coding chr19:55817719 chr19:55817714 nonsynonymous SNV 0.994 3 16 hm5C_associated_SNPs_43231 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55817701-55817730
64251 chr5 151183555 151183555 1 + G A UCEC 151183550 + 151183530 151183570 41 CGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGG CGCCTTCGGGGACCTGGAGGCCCTCAAGGTGGGCTGGGTGG < 41bp 1 0.259934844109219 1 0.369104892015457 experiment 1 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control G3BP1 ENSG00000145907 CDS Human protein_coding chr5:151183550 chr5:151183555 nonsynonymous SNV 1.000 2 26 hm5C_associated_SNPs_43232 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:151183520-151183560
64251 chr19 17273842 17273842 1 + C T UCEC 17273851 + 17273831 17273871 41 TTTGAAGACTTCGAGAGGAACAGCTTTGAGCAGTTCTGCAT TTTGAAGACTTTGAGAGGAACAGCTTTGAGCAGTTCTGCAT < 41bp 1 0.287346950680078 1 0.120919525623322 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17273851 chr19:17273842 synonymous SNV . 0 12 hm5C_associated_SNPs_43234 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:17273810-17273846
64251 chr19 36034688 36034688 1 - A G UCEC 36034699 - 36034679 36034719 41 GTGTAGGCAAGGATGCCAGCCATGGGCCCCTTGGCTGCTGC GTGTAGGCAAGGATGCCAGCCATGGGCCCCTCGGCTGCTGC < 41bp 1 0.436300955421026 1 0.651051700115204 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36034699 chr19:36034688 nonsynonymous SNV 0.998 0 32 hm5C_associated_SNPs_43235 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:36034660-36034700
64251 chrX 24755780 24755780 1 + G T UCEC 24755775 + 24755755 24755795 41 ATGGGTTTGAACTGGAAGTACTACTGCAGAGAATTAATGTG ATGGGTTTGAACTGGAAGTACTACTTCAGAGAATTAATGTG < 41bp 1 0.146114023010246 1 0.110177397727966 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLA1 ENSG00000101868 CDS Human protein_coding chrX:24755775 chrX:24755780 synonymous SNV . 0 26 hm5C_associated_SNPs_43236 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:24755750-24755784
64251 chr15 74918195 74918195 1 + G A UCEC 74918204 + 74918184 74918224 41 ACATGTGCATCGCCTTTGAGCTCCTGGGCAAGAACACCTTT ACATGTGCATCACCTTTGAGCTCCTGGGCAAGAACACCTTT < 41bp 1 0.378589999800979 1 0.169330179691315 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74918204 chr15:74918195 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_43237 0 0 7 DDX24 POSTAR2 ENCODE chr15:74918131-74918282
64251 chrX 73044089 73044089 1 - A G UCEC 73044072 - 73044052 73044092 41 TGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATTGTG TGGCTGTCTGAAGAATGCCACTATAGTAGTTATCTATTGTG < 41bp 1 0.107569168281138 1 0.116167902946472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044072 chrX:73044089 . . 0 4 hm5C_associated_SNPs_43238 0 0 74 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044089 73044089 1 - A G UCEC 73044074 - 73044054 73044094 41 ATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATTG ATTGGCTGTCTGAAGAATGCCACTATAGTAGTTATCTATTG < 41bp 1 0.284263856789555 1 0.136016666889191 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044074 chrX:73044089 . . 0 6 hm5C_associated_SNPs_43239 0 0 74 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044089 73044089 1 - A G UCEC 73044075 - 73044055 73044095 41 GATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATT GATTGGCTGTCTGAAGAATGCCACTATAGTAGTTATCTATT < 41bp 1 0.0719109012507337 1 0.0276032984256744 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044075 chrX:73044089 . . 0 7 hm5C_associated_SNPs_43240 0 0 74 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044089 73044089 1 - A G UCEC 73044085 - 73044065 73044105 41 ATACGCAAGGGATTGGTTGTCTGAAGAATGCCACTATAGTA ATACGCAAGGGATTGGCTGTCTGAAGAATGCCACTATAGTA < 41bp 1 0.52854180144539 1 0.583789587020874 experiment 0.94291639710922 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044085 chrX:73044089 . . 0 17 hm5C_associated_SNPs_43241 0 0 74 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr2 71368480 71368480 1 + A C UCEC 71368493 + 71368473 71368513 41 GAACAGGAGTACATCAAACTCAACCAGGTGAGGAAGCCTGT GAACAGGCGTACATCAAACTCAACCAGGTGAGGAAGCCTGT < 41bp 1 0.365308348845073 1 0.079357922077179 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71368493 chr2:71368480 nonsynonymous SNV 0.989 4 8 hm5C_associated_SNPs_43242 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71368451-71368484
64251 chr4 48835483 48835483 1 + A C UCEC 48835494 + 48835474 48835514 41 AATGATGAAAGCTTCTGGTTCAGATGTGAGTTCAATTTTCT AATGATGAACGCTTCTGGTTCAGATGTGAGTTCAATTTTCT < 41bp 1 0.339590232094135 1 0.472832143306732 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48835494 chr4:48835483 nonsynonymous SNV 0.984 3 10 hm5C_associated_SNPs_43244 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:48835421-48835490
64251 chr1 186946857 186946857 1 + G T UCEC 186946875 + 186946855 186946895 41 AAGATTGCCCAACCATCATCCACTTTGTTCTGGCCAACATC AATATTGCCCAACCATCATCCACTTTGTTCTGGCCAACATC < 41bp 1 0.194041300059054 1 0.374133229255676 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186946875 chr1:186946857 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_43247 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:186946845-186946868
64251 chr6 31929384 31929384 1 + G A UCEC 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCTCAGGAGCAGTGGACCATCCCTGTGGAC < 41bp 1 0.270588734295636 1 0.409623652696609 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929384 nonsynonymous SNV 0.928 3 27 hm5C_associated_SNPs_43248 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr11 68213990 68213990 1 + G A UCEC 68213986 + 68213966 68214006 41 CTCTTCAAACATTCCGGCCACTGCGAGACCGTACAGGTAGG CTCTTCAAACATTCCGGCCACTGCAAGACCGTACAGGTAGG < 41bp 1 0.475166643476831 1 0.460545748472214 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68213986 chr11:68213990 synonymous SNV . 0 25 hm5C_associated_SNPs_43249 0 0 4 BUD13 POSTAR2 ENCODE chr11:68213965-68214000
64251 chr6 160481681 160481681 1 + G A UCEC 160481661 + 160481641 160481681 41 AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCG AAATTCCTGCATCAAGATATCGACTCTGGGCAAGGGATCCA < 41bp 1 0.162425975805561 1 0.305353164672852 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160481661 chr6:160481681 nonsynonymous SNV 0.952 0 41 hm5C_associated_SNPs_43251 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:160481653-160481685
64251 chr5 118529625 118529625 1 + G A UCEC 118529637 + 118529617 118529657 41 TAGCATCAGATTTCCATCTCCAGGAACATTCTAATTCAAAT TAGCATCAAATTTCCATCTCCAGGAACATTCTAATTCAAAT < 41bp 1 0.227615393526621 1 0.820639491081238 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118529637 chr5:118529625 nonsynonymous SNV 0.989 0 9 hm5C_associated_SNPs_43252 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:118529602-118529625
64251 chr1 156202162 156202162 1 + G A UCEC 156202172 + 156202152 156202192 41 TGCAGCCTGCGATGACACAGCAAATCTATGACAAGTTTATA TGCAGCCTGCAATGACACAGCAAATCTATGACAAGTTTATA < 41bp 1 0.0943916493808916 1 0.161862403154373 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PMF1;PMF1-BGLAP ENSG00000160783;ENSG00000260238 CDS Human other chr1:156202172 chr1:156202162 synonymous SNV . 0 11 hm5C_associated_SNPs_43253 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:156202133-156202162
64251 chr14 71444258 71444258 1 + A C UCEC 71444269 + 71444249 71444289 41 AGCTATAAAAGTGAGCAGACCAGCTCAACTCACATAGAGAG AGCTATAAACGTGAGCAGACCAGCTCAACTCACATAGAGAG < 41bp 1 0.194707344133328 1 0.335364460945129 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444269 chr14:71444258 nonsynonymous SNV 0.971 4 10 hm5C_associated_SNPs_43254 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:71444236-71444274
64251 chrX 110951614 110951614 1 + C T UCEC 110951619 + 110951599 110951639 41 TCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC TCTTTCGGGCCATTTTGGAGCAGGTAAAAGGAAAACATATC < 41bp 1 0.523663303685945 1 0.824633598327637 experiment 0.95267339262811 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951619 chrX:110951614 nonsynonymous SNV 0.979 2 16 hm5C_associated_SNPs_43255 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:110951576-110951621
64251 chrX 73046152 73046152 1 - A C UCEC 73046132 - 73046112 73046152 41 TTCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAA GTCAGTCCTTTCTTTTGACCCCAGAAGCCCTAGACTGAGAA < 41bp 1 0.141184151893687 1 0.302256166934967 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046132 chrX:73046152 . . 0 1 hm5C_associated_SNPs_43256 0 0 64 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73043819-73046289
64251 chr1 214814423 214814423 1 + A G UCEC 214814421 + 214814401 214814441 41 AGAACAAGGAAAAAGAGCTGCAACTTTTAAATGATAAGGTA AGAACAAGGAAAAAGAGCTGCAGCTTTTAAATGATAAGGTA < 41bp 1 0.24977429467557 1 0.397276133298874 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214814421 chr1:214814423 synonymous SNV . 0 23 hm5C_associated_SNPs_43257 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214814335-214814467
64251 chr19 48259792 48259792 1 + G A UCEC 48259799 + 48259779 48259819 41 CTGTAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAG CTGTAGCCCGAGGACAACATCCTTCGAGACCGGTTCAAGAG < 41bp 1 0.0407402933362894 1 0.107763946056366 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259799 chr19:48259792 nonsynonymous SNV 0.965 4 14 hm5C_associated_SNPs_43258 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48259748-48259796
64251 chr19 48259792 48259792 1 + G A UCEC 48259803 + 48259783 48259823 41 AGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTC AGCCCGAGGACAACATCCTTCGAGACCGGTTCAAGAGCTTC < 41bp 1 0.690413364686265 1 0.894723773002625 experiment 0.61917327062747 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259803 chr19:48259792 nonsynonymous SNV 0.965 4 10 hm5C_associated_SNPs_43259 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48259748-48259796
64251 chr7 128119315 128119315 1 + G A UCEC 128119323 + 128119303 128119343 41 CGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATT CGAATTCCCTGAACTGGCACCTAGCCAAAATCAAAATCATT < 41bp 1 0.0950073244663258 1 0.103072345256805 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METTL2B ENSG00000165055 CDS Human protein_coding chr7:128119323 chr7:128119315 synonymous SNV . 0 13 hm5C_associated_SNPs_43260 0 0 1 ZNF622 POSTAR2 ENCODE chr7:128119285-128119369
64251 chr6 4937919 4937919 1 + C T UCEC 4937916 + 4937896 4937936 41 TTGACTTTATTTATTTTATACGACGTCTGACAGATGACAGG TTGACTTTATTTATTTTATACGATGTCTGACAGATGACAGG < 41bp 1 0.202440168185086 1 0.155318737030029 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4937916 chr6:4937919 nonsynonymous SNV 0.965 1 24 hm5C_associated_SNPs_43261 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:4937900-4937920
64251 chrX 100667727 100667727 1 + G T UCEC 100667738 + 100667718 100667758 41 GGCTATAATGATGGATATGGCTTTGGGTCTGATAGATTTGG GGCTATAATTATGGATATGGCTTTGGGTCTGATAGATTTGG < 41bp 1 0.275252543509054 1 0.0553068220615387 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667738 chrX:100667727 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_43262 0 0 18 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:100667679-100667727
64251 chrX 149896165 149896165 1 + T G UCEC 149896183 + 149896163 149896203 41 ATTTTATCCTTGATGTTCCCCTTGGAGTGATCAGCAGAGTG ATGTTATCCTTGATGTTCCCCTTGGAGTGATCAGCAGAGTG < 41bp 1 0.269246012152963 1 0.0332295000553131 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149896183 chrX:149896165 nonsynonymous SNV 0.953 2 3 hm5C_associated_SNPs_43264 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chrX:149896163-149896196
64251 chr12 101705858 101705858 1 + G T UCEC 101705877 + 101705857 101705897 41 AGATGAAAGTTGGGAGCAGACCCAGGAAGGAGATGTTGGAG ATATGAAAGTTGGGAGCAGACCCAGGAAGGAGATGTTGGAG < 41bp 1 0.372117665471451 1 0.470059394836426 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101705877 chr12:101705858 nonsynonymous SNV 0.615 1 2 hm5C_associated_SNPs_43265 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:101705831-101705876
64251 chr11 117152058 117152058 1 + C T UCEC 117152053 + 117152033 117152073 41 AACTCCCCCAACACTGGAGACAGTTCGTTCCAAACAGGAGT AACTCCCCCAACACTGGAGACAGTTTGTTCCAAACAGGAGT < 41bp 1 0.106330517568011 1 0.147689044475555 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152053 chr11:117152058 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_43266 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:117152030-117152059
64251 chrX 105921476 105921476 1 + G T UCEC 105921458 + 105921438 105921478 41 AAAGTGGAAGTCTATTTGCACAAGATTTATAGTCCAGAGAA AAAGTGGAAGTCTATTTGCACAAGATTTATAGTCCAGATAA < 41bp 1 0.688327668206147 1 0.169796854257584 experiment 0.623344663587706 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105921458 chrX:105921476 nonsynonymous SNV 0.152 0 39 hm5C_associated_SNPs_43267 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:105921461-105921491
64251 chr7 128445497 128445497 1 + C A UCEC 128445505 + 128445485 128445525 41 AGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT AGAAATGGATTTATTAGAGCCTGATCCTGAAATGCAGTTGT < 41bp 1 0.173849745807327 1 0.191786736249924 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445505 chr7:128445497 nonsynonymous SNV 0.997 2 13 hm5C_associated_SNPs_43268 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr7 128445497 128445497 1 + C A UCEC 128445510 + 128445490 128445530 41 TGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG TGGATTTATTAGAGCCTGATCCTGAAATGCAGTTGTTACGG < 41bp 1 0.367808869165758 1 0.372789978981018 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445510 chr7:128445497 nonsynonymous SNV 0.997 2 8 hm5C_associated_SNPs_43269 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr1 118477158 118477158 1 + A C UCEC 118477159 + 118477139 118477179 41 GCCCCTCCCCAGATGGGCTACACTTAGCTGTTGGGTATGAG GCCCCTCCCCAGATGGGCTCCACTTAGCTGTTGGGTATGAG < 41bp 1 0.15352055178063 1 0.0796947479248047 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WDR3 ENSG00000065183 CDS Human protein_coding chr1:118477159 chr1:118477158 synonymous SNV . 0 20 hm5C_associated_SNPs_43270 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:118477151-118477173
64251 chr12 132516567 132516567 1 + A G UCEC 132516568 + 132516548 132516588 41 CTCCACTCACAGCCGTACCACAGGTATAAACCTTGTAGAGG CTCCACTCACAGCCGTACCGCAGGTATAAACCTTGTAGAGG < 41bp 1 0.20195211155832 1 0.255713403224945 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132516568 chr12:132516567 nonsynonymous SNV 0.069 0 20 hm5C_associated_SNPs_43271 0 0 12 BUD13 POSTAR2 ENCODE chr12:132516515-132516578
64251 chrX 100880687 100880687 1 + A G UCEC 100880681 + 100880661 100880701 41 TGACTGTTACTAATGAGTATCAGCACATGCTTGCTAATTCC TGACTGTTACTAATGAGTATCAGCACGTGCTTGCTAATTCC < 41bp 1 0.654754806496102 1 0.718309283256531 experiment 0.690490387007797 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880681 chrX:100880687 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_43272 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:100880670-100880694
64251 chrX 100880687 100880687 1 + A G UCEC 100880686 + 100880666 100880706 41 GTTACTAATGAGTATCAGCACATGCTTGCTAATTCCATTTC GTTACTAATGAGTATCAGCACGTGCTTGCTAATTCCATTTC < 41bp 1 0.383833291840413 1 0.0518956184387207 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880686 chrX:100880687 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_43273 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:100880670-100880694
64251 chr16 29989126 29989126 1 + G T UCEC 29989108 + 29989088 29989128 41 GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAATGA < 41bp 1 0.578324013290867 1 0.597264051437378 experiment 0.843351973418267 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989108 chr16:29989126 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_43275 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:29989124-29989167
64251 chr16 29989126 29989126 1 + G T UCEC 29989109 + 29989089 29989129 41 CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAATGAC < 41bp 1 0.450288415698673 1 0.610597908496857 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989109 chr16:29989126 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_43276 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:29989124-29989167
64251 chr9 38396515 38396515 1 + A G UCEC 38396501 + 38396481 38396521 41 GGTGCGGCCATCGCCCAGCACGTGGATGTTGACAAAGTTGC GGTGCGGCCATCGCCCAGCACGTGGATGTTGACAGAGTTGC < 41bp 1 0.555860020665685 1 0.361317276954651 experiment 0.88827995866863 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396501 chr9:38396515 nonsynonymous SNV 0.690 4 35 hm5C_associated_SNPs_43278 0 0 1 RPS3 POSTAR2 ENCODE chr9:38396515-38396550
64251 chr11 67354016 67354016 1 + A G UCEC 67353999 + 67353979 67354019 41 CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACC CAAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGGACC < 41bp 1 0.0183728782882829 1 0.0999182462692261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67353999 chr11:67354016 nonsynonymous SNV 0.999 1 38 hm5C_associated_SNPs_43279 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:67353980-67354020
64251 chr11 67354016 67354016 1 + A G UCEC 67354000 + 67353980 67354020 41 AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGAACCT AAGCTCAAGGCCTTCCTGGCCTCCCCTGAGTACGTGGACCT < 41bp 1 0.259086506352345 1 0.155122190713882 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67354000 chr11:67354016 nonsynonymous SNV 0.999 1 37 hm5C_associated_SNPs_43280 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:67353980-67354020
64251 chr2 202899668 202899668 1 + T G UCEC 202899657 + 202899637 202899677 41 GGTGAAGGTGCAGTGTTCTCCCGAACTCCGCTTTTTCTTAT GGTGAAGGTGCAGTGTTCTCCCGAACTCCGCGTTTTCTTAT < 41bp 1 0.654513412221557 1 0.383309543132782 experiment 0.690973175556885 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899657 chr2:202899668 nonsynonymous SNV 0.899 3 32 hm5C_associated_SNPs_43281 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:202899660-202899680
64251 chr11 4159538 4159538 1 + A C UCEC 4159553 + 4159533 4159573 41 GAAGAAGAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTC GAAGACGAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTC < 41bp 1 0.586804537179162 1 0.352235853672028 experiment 0.826390925641676 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4159553 chr11:4159538 nonsynonymous SNV 0.998 1 6 hm5C_associated_SNPs_43282 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:4159520-4159540
64251 chr5 17275336 17275336 1 + A C UCEC 17275338 + 17275318 17275358 41 ACTCCAAGATGGGAGGCAAGCTCAGCAAGAAGAAGAAGGGC ACTCCAAGATGGGAGGCACGCTCAGCAAGAAGAAGAAGGGC < 41bp 1 0.652242324741596 1 0.185456037521362 experiment 0.695515350516808 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275338 chr5:17275336 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_43283 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:17275320-17275340
64251 chr7 131128396 131128396 1 + G A UCEC 131128390 + 131128370 131128410 41 GTCAAACCTGGAAACTTCTTCGAGAGGACTCCTGTAATGCT GTCAAACCTGGAAACTTCTTCGAGAGAACTCCTGTAATGCT < 41bp 1 0.738005900879593 1 0.769102811813354 experiment 0.523988198240814 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131128390 chr7:131128396 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_43284 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:131128359-131128402
64251 chr1 39926400 39926400 1 + C T UCEC 39926397 + 39926377 39926417 41 CTCGAGTGATGGATTTCTTCCGGCGCATTGATAAGGACCAG CTCGAGTGATGGATTTCTTCCGGTGCATTGATAAGGACCAG < 41bp 1 0.135744780244119 1 0.864873886108398 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39926397 chr1:39926400 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_43285 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39926379-39926432
64251 chr6 1390653 1390653 1 + C T UCEC 1390666 + 1390646 1390686 41 ACGAGTGCTTCATCAAGCTGCCTAAGGGCCTCGGGCGGCCC ACGAGTGTTTCATCAAGCTGCCTAAGGGCCTCGGGCGGCCC < 41bp 1 0.157346840340737 1 0.13671401143074 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390666 chr6:1390653 synonymous SNV . 0 8 hm5C_associated_SNPs_43286 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:1390652-1390653
64251 chr6 25551213 25551213 1 + G T UCEC 25551227 + 25551207 25551247 41 CGACAAGACTTGATTCATGCCAGCACCGAAAAGATTTCTAT CGACAATACTTGATTCATGCCAGCACCGAAAAGATTTCTAT < 41bp 1 0.386097734793043 1 0.424963653087616 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARMIL1 ENSG00000079691 CDS Human protein_coding chr6:25551227 chr6:25551213 nonsynonymous SNV 0.995 3 7 hm5C_associated_SNPs_43287 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:25551208-25551221
64251 chr12 123892122 123892122 1 + G T UCEC 123892103 + 123892083 123892123 41 AATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCACGA AATCACAGCAAATGTGGGAACTGCCAAACCAAACTGCACTA < 41bp 1 0.471639095560333 1 0.39312732219696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892103 chr12:123892122 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_43289 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:123892120-123892140
64251 chr17 62223767 62223767 1 + T C UCEC 62223763 + 62223743 62223783 41 GTCAATCTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGG GTCAATCTGCAGCGCTAGAGCATGCGCTTGCGCATAACTGG < 41bp 1 0.50662541833127 1 0.369872868061066 experiment 0.98674916333746 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223763 chr17:62223767 . . 0 25 hm5C_associated_SNPs_43290 0 0 22 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223767 62223767 1 + T C UCEC 62223769 + 62223749 62223789 41 CTGCAGCGCTAGAGCATGTGCTTGCGCATAACTGGGGCCGC CTGCAGCGCTAGAGCATGCGCTTGCGCATAACTGGGGCCGC < 41bp 1 0.346318186491137 1 0.135264933109283 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223769 chr17:62223767 . . 0 19 hm5C_associated_SNPs_43291 0 0 22 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223767 62223767 1 + T C UCEC 62223787 + 62223767 62223807 41 TGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG CGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCGCGGGCGG < 41bp 1 0.287344947616032 1 0.064817488193512 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223787 chr17:62223767 . . 0 1 hm5C_associated_SNPs_43292 0 0 22 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr2 24888650 24888650 1 + A C UCEC 24888633 + 24888613 24888653 41 AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATAAATA AACAGCACGGAAAAGAGGCGCAGGGAGCAAGAAAATACATA < 41bp 1 0.32602207521723 1 0.600242674350739 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24888633 chr2:24888650 nonsynonymous SNV 0.997 5 38 hm5C_associated_SNPs_43295 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:24888629-24888650
64251 chr11 35684884 35684884 1 + G A UCEC 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGA < 41bp 1 0.240858368197367 1 0.478824317455292 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684884 synonymous SNV . 0 41 hm5C_associated_SNPs_43296 0 0 1 FASTKD2 POSTAR2 ENCODE chr11:35684883-35684924
64251 chr7 101837150 101837150 1 + T C UCEC 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGCACCGCCCGAGGGCGCTGGGACA < 41bp 1 0.0443910122429204 1 0.214567929506302 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837150 nonsynonymous SNV 0.416 1 24 hm5C_associated_SNPs_43297 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 101837150 101837150 1 + T C UCEC 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGCACCGCCCGAGGGCGCTGGGACAC < 41bp 1 0.215849959436886 1 0.61100161075592 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837150 nonsynonymous SNV 0.416 1 23 hm5C_associated_SNPs_43298 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chrX 70776888 70776888 1 + A G UCEC 70776893 + 70776873 70776913 41 GAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCT GAGCCTTGCAGTGTTGTACGCGTGCCATCCAAATTAATCCT < 41bp 1 0.226573646715895 1 0.0445112287998199 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70776893 chrX:70776888 nonsynonymous SNV 0.997 4 16 hm5C_associated_SNPs_43299 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70776805-70776893
64251 chr1 166818706 166818706 1 + A G UCEC 166818712 + 166818692 166818732 41 CGCCCAGGAAATGAACATTCCAGAGAAAGGGTTCAAGGCAA CGCCCAGGAAATGAGCATTCCAGAGAAAGGGTTCAAGGCAA < 41bp 1 0.604483644798704 1 0.389917701482773 experiment 0.791032710402592 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166818712 chr1:166818706 nonsynonymous SNV 0.999 1 15 hm5C_associated_SNPs_43300 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:166818672-166818710
64251 chr1 214814550 214814550 1 + G A UCEC 214814530 + 214814510 214814550 41 GCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAG GCTACAACTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAA < 41bp 1 0.0947743553853225 1 0.0872783362865448 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814530 chr1:214814550 nonsynonymous SNV 0.979 2 41 hm5C_associated_SNPs_43301 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214814472-214814551
64251 chr1 214814550 214814550 1 + G A UCEC 214814537 + 214814517 214814557 41 CTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAGAAATGAG CTTTTATCCGAAACCCTAAGCTTGGAGAAGAAAAAAATGAG < 41bp 1 0.155278552463184 1 0.431474626064301 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214814537 chr1:214814550 nonsynonymous SNV 0.979 2 34 hm5C_associated_SNPs_43302 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214814472-214814551
64251 chr7 2411435 2411435 1 + T G UCEC 2411420 + 2411400 2411440 41 TTTTTTAAACAGGGTGTTGTCACAAATTTTGAAATTTTCCG TTTTTTAAACAGGGTGTTGTCACAAATTTTGAAATGTTCCG < 41bp 1 0.672183510511598 1 0.491657346487045 experiment 0.655632978976803 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2411420 chr7:2411435 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_43303 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:2411409-2411447
64251 chr11 4142895 4142895 1 + A G UCEC 4142908 + 4142888 4142928 41 TTCCTTGATTTAAAGAAGAACACAGGAAAGGAAGAGCAGCG TTCCTTGGTTTAAAGAAGAACACAGGAAAGGAAGAGCAGCG < 41bp 1 0.449058282251959 1 0.371017724275589 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142908 chr11:4142895 nonsynonymous SNV 0.997 2 8 hm5C_associated_SNPs_43304 0 0 4 WDR33 POSTAR2 GSE61123,GSM1496985 chr11:4142870-4142901
64251 chr11 70181778 70181778 1 + G T UCEC 70181768 + 70181748 70181788 41 ATGAGAGGCTTCAACTTCATCTTAAAGAGAGAATGGCTGCT ATGAGAGGCTTCAACTTCATCTTAAAGAGATAATGGCTGCT < 41bp 1 0.229950504901971 1 0.279085218906403 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70181768 chr11:70181778 nonsynonymous SNV 0.994 3 31 hm5C_associated_SNPs_43305 0 0 2 DDX24 POSTAR2 ENCODE chr11:70181734-70181781
64251 chr1 198233309 198233309 1 + G T UCEC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATTCATTGAAGATAATTAACTAAA < 41bp 1 0.12808162700761 1 0.368995100259781 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233309 stopgain 1.000 1 34 hm5C_associated_SNPs_43306 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:198233293-198233349
64251 chr6 36175108 36175108 1 + A C UCEC 36175115 + 36175095 36175135 41 GCAGGATGAGAAGACAAGTGCAGTGAAGGAGGAGCTGAAGT GCAGGATGAGAAGCCAAGTGCAGTGAAGGAGGAGCTGAAGT < 41bp 1 0.277711225686123 1 0.704143822193146 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36175115 chr6:36175108 nonsynonymous SNV 0.998 2 14 hm5C_associated_SNPs_43308 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:36175100-36175120
64251 chr20 31021424 31021424 1 + G A UCEC 31021436 + 31021416 31021456 41 CAGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT CAGCACCCAACCTGGAGGGTCCCGAATTCCCAGTTGAGTCT < 41bp 1 0.477273940054987 1 0.13561549782753 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021436 chr20:31021424 nonsynonymous SNV 0.000 0 9 hm5C_associated_SNPs_43309 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr20 31021424 31021424 1 + G A UCEC 31021437 + 31021417 31021457 41 AGCACCCGACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG AGCACCCAACCTGGAGGGTCCCGAATTCCCAGTTGAGTCTG < 41bp 1 0.504180431221843 1 0.264307677745819 experiment 0.991639137556314 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021437 chr20:31021424 nonsynonymous SNV 0.000 0 8 hm5C_associated_SNPs_43310 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr12 64810527 64810527 1 + A C UCEC 64810521 + 64810501 64810541 41 GCTTTCAAGTACTGGAACATCAAGTTAAATACAAGTAAGGC GCTTTCAAGTACTGGAACATCAAGTTCAATACAAGTAAGGC < 41bp 1 0.505933701090385 1 0.545646131038666 experiment 0.98813259781923 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control XPOT ENSG00000184575 CDS Human protein_coding chr12:64810521 chr12:64810527 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_43311 0 0 1 IGF2BP1 POSTAR2 ENCODE chr12:64810524-64810534
64251 chr3 50006056 50006056 1 + G T UCEC 50006076 + 50006056 50006096 41 GATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCT TATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCT < 41bp 1 0.141108897822132 1 0.114535629749298 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBM6 ENSG00000004534 CDS Human protein_coding chr3:50006076 chr3:50006056 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_43312 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:50006036-50006057
64251 chr1 198222180 198222180 1 + G A UCEC 198222182 + 198222162 198222202 41 AATTACAGAAGGCCTTACGACCGGATATGGGCTATAATACA AATTACAGAAGGCCTTACAACCGGATATGGGCTATAATACA < 41bp 1 0.633175392452268 1 0.840398550033569 experiment 0.733649215095465 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEK7 ENSG00000151414 CDS Human protein_coding chr1:198222182 chr1:198222180 nonsynonymous SNV 0.999 1 19 hm5C_associated_SNPs_43313 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:198222167-198222201
64251 chr1 198222180 198222180 1 + G A UCEC 198222183 + 198222163 198222203 41 ATTACAGAAGGCCTTACGACCGGATATGGGCTATAATACAT ATTACAGAAGGCCTTACAACCGGATATGGGCTATAATACAT < 41bp 1 0.546737383178731 1 0.705528020858765 experiment 0.906525233642538 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEK7 ENSG00000151414 CDS Human protein_coding chr1:198222183 chr1:198222180 nonsynonymous SNV 0.999 1 18 hm5C_associated_SNPs_43314 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:198222167-198222201
64251 chr13 77570192 77570192 1 + C T UCEC 77570189 + 77570169 77570209 41 TGGTGTAATCAAGGCGCTGCCTGCTTTTTTGAGGGAATTGA TGGTGTAATCAAGGCGCTGCCTGTTTTTTTGAGGGAATTGA < 41bp 1 0.422000691616503 1 0.0906981825828552 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570189 chr13:77570192 synonymous SNV . 0 24 hm5C_associated_SNPs_43317 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr13:77570178-77570245
64251 chr14 102484870 102484870 1 + G T UCEC 102484854 + 102484834 102484874 41 GCCTCCCTCACACAGATCTACGGCACCTTCAACCGCGCCAT GCCTCCCTCACACAGATCTACGGCACCTTCAACCGCTCCAT < 41bp 1 0.352639361492788 1 0.297518134117126 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102484854 chr14:102484870 nonsynonymous SNV 0.985 4 37 hm5C_associated_SNPs_43319 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr14:102484848-102484870
64251 chr14 102484870 102484870 1 + G T UCEC 102484872 + 102484852 102484892 41 TACGGCACCTTCAACCGCGCCATGCTGAGGCTCATTCCATC TACGGCACCTTCAACCGCTCCATGCTGAGGCTCATTCCATC < 41bp 1 0.063619357258663 1 0.0661492347717285 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102484872 chr14:102484870 nonsynonymous SNV 0.985 4 19 hm5C_associated_SNPs_43320 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr14:102484848-102484870
64251 chr11 764325 764325 1 + G T UCEC 764334 + 764314 764354 41 CACCTGGATGAGAAGTCTTTCCGTTGGTTGCACAACGAGGA CACCTGGATGATAAGTCTTTCCGTTGGTTGCACAACGAGGA < 41bp 1 0.171206242179714 1 0.286462783813477 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control TALDO1 ENSG00000177156 CDS Human protein_coding chr11:764334 chr11:764325 nonsynonymous SNV 0.989 5 12 hm5C_associated_SNPs_43321 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:764301-764385
64251 chr11 43413475 43413475 1 + T C UCEC 43413476 + 43413456 43413496 41 GGAGTATAGATGACATAGGTCACCTCATTCATGAAGGCCTA GGAGTATAGATGACATAGGCCACCTCATTCATGAAGGCCTA < 41bp 1 0.273708968997949 1 0.0621383190155029 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TTC17 ENSG00000052841 CDS Human protein_coding chr11:43413476 chr11:43413475 synonymous SNV . 0 20 hm5C_associated_SNPs_43322 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:43413441-43413479
64251 chr2 191523983 191523983 1 + T G UCEC 191523972 + 191523952 191523992 41 TATTACAAAAAGCCAATCTACTTTCTTATTTTGATGCCTTT TATTACAAAAAGCCAATCTACTTTCTTATTTGGATGCCTTT < 41bp 1 0.0677874413225327 1 0.0374069809913635 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191523972 chr2:191523983 nonsynonymous SNV 0.907 4 32 hm5C_associated_SNPs_43323 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:191523963-191523984
64251 chr12 94563018 94563018 1 + A C UCEC 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTCAT < 41bp 1 0.0781452934409065 1 0.0791213810443878 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563018 synonymous SNV . 0 39 hm5C_associated_SNPs_43324 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr5 127522285 127522285 1 + C T UCEC 127522271 + 127522251 127522291 41 TCTATCTAAGGACCTACCACCAATCCTCCTAGTTCGTGGGA TCTATCTAAGGACCTACCACCAATCCTCCTAGTTTGTGGGA < 41bp 1 0.0630831240775422 1 0.724978685379028 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLC12A2 ENSG00000064651 CDS Human protein_coding chr5:127522271 chr5:127522285 nonsynonymous SNV 0.987 5 35 hm5C_associated_SNPs_43326 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:127522258-127522290
64251 chr17 8172158 8172158 1 + G T UCEC 8172177 + 8172157 8172197 41 GGAGTGCGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG GTAGTGCGCACGGGGAAGGTCAGGCCCAAGGAAGGCTGGGG < 41bp 1 0.560009730588745 1 0.799729824066162 experiment 0.879980538822511 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PFAS ENSG00000178921 CDS Human protein_coding chr17:8172177 chr17:8172158 nonsynonymous SNV 0.947 4 2 hm5C_associated_SNPs_43328 0 0 2 EIF3H POSTAR2 ENCODE chr17:8172078-8172166
64251 chr6 7579645 7579645 1 + G A UCEC 7579653 + 7579633 7579673 41 CCAGTTCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGA CCAGTTCAAAGCAAAGCTTGCGAGCCTGGAGGAGCTGAAGA < 41bp 1 0.233317482644936 1 0.414813071489334 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579653 chr6:7579645 synonymous SNV . 0 13 hm5C_associated_SNPs_43329 0 0 9 AGGF1 POSTAR2 ENCODE chr6:7579586-7579689
64251 chrX 123190069 123190069 1 + G T UCEC 123190075 + 123190055 123190095 41 CAGTAGCAGCTGGAGAATTTCTCTACAAAAAGTAAATCTAT CAGTAGCAGCTGGATAATTTCTCTACAAAAAGTAAATCTAT < 41bp 1 0.513070628542924 1 0.941492080688477 experiment 0.973858742914151 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123190075 chrX:123190069 stopgain 1.000 1 15 hm5C_associated_SNPs_43330 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:123190060-123190086
64251 chr22 45579398 45579398 1 + T G UCEC 45579387 + 45579367 45579407 41 GACACAGCTTTTGGTGCGGGCAGACACCAATTTAGGTGGGT GACACAGCTTTTGGTGCGGGCAGACACCAATGTAGGTGGGT < 41bp 1 0.111483163288223 1 0.41553196310997 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NUP50 ENSG00000093000 CDS Human protein_coding chr22:45579387 chr22:45579398 nonsynonymous SNV 0.999 1 32 hm5C_associated_SNPs_43331 0 0 1 PRPF8 POSTAR2 ENCODE chr22:45579378-45579438
64251 chr16 57144721 57144721 1 + G A UCEC 57144701 + 57144681 57144721 41 CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCG CCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCA < 41bp 1 0.264630971303037 1 0.246393591165543 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57144701 chr16:57144721 nonsynonymous SNV 0.944 3 41 hm5C_associated_SNPs_43332 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57144688-57144723
64251 chrX 110951600 110951600 1 + C A UCEC 110951614 + 110951594 110951634 41 TTGCCTCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAAC TTGCCTATTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAAC < 41bp 1 0.767788706302257 1 0.764154195785522 experiment 0.464422587395486 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951614 chrX:110951600 synonymous SNV . 0 7 hm5C_associated_SNPs_43333 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:110951479-110951601
64251 chrX 110951600 110951600 1 + C A UCEC 110951619 + 110951599 110951639 41 TCTTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC TATTTCGGGCCATTTCGGAGCAGGTAAAAGGAAAACATATC < 41bp 1 0.470433991983063 1 0.870934247970581 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG13 ENSG00000101901 CDS Human protein_coding chrX:110951619 chrX:110951600 synonymous SNV . 0 2 hm5C_associated_SNPs_43334 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:110951479-110951601
64251 chr17 17061785 17061785 1 + T C UCEC 17061773 + 17061753 17061793 41 CCAGAGGAAAAAAACAAGAGCAGCTGCTCTTTTGAGACCTG CCAGAGGAAAAAAACAAGAGCAGCTGCTCTTTCGAGACCTG < 41bp 1 0.100794710965395 1 0.328359097242355 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MPRIP ENSG00000133030 CDS Human protein_coding chr17:17061773 chr17:17061785 synonymous SNV . 0 33 hm5C_associated_SNPs_43338 0 0 2 GRWD1 POSTAR2 ENCODE chr17:17061775-17061874
64251 chr10 72289786 72289786 1 + A G UCEC 72289804 + 72289784 72289824 41 TCAGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGG TCGGGCGGGTCCTCCAGAAACTCCAGAAGGACGGACATAGG < 41bp 1 0.794284247606309 1 0.823641300201416 experiment 0.411431504787382 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout PALD1 ENSG00000107719 CDS Human protein_coding chr10:72289804 chr10:72289786 nonsynonymous SNV 0.599 2 3 hm5C_associated_SNPs_43339 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:72289772-72289800
64251 chr16 66969436 66969436 1 + A G UCEC 66969432 + 66969412 66969452 41 GACTCCCTGCCCAGTCCAAACTCCAAGGCTGGGCAAGGCAC GACTCCCTGCCCAGTCCAAACTCCGAGGCTGGGCAAGGCAC < 41bp 1 0.712287230550195 1 0.641317009925842 experiment 0.575425538899611 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CES2 ENSG00000172831 CDS Human protein_coding chr16:66969432 chr16:66969436 synonymous SNV . 0 25 hm5C_associated_SNPs_43340 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:66969435-66969436
64251 chr1 28975133 28975133 1 + T A UCEC 28975140 + 28975120 28975160 41 CTTCTGTCGTGAGTGGCACACGTAGGGCAACTCGATTGCTC CTTCTGTCGTGAGAGGCACACGTAGGGCAACTCGATTGCTC < 41bp 1 0.58779622506442 1 0.255649626255035 experiment 0.824407549871159 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975140 chr1:28975133 . . 0 14 hm5C_associated_SNPs_43341 0 0 59 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:28975100-28975140
64251 chr16 78143703 78143703 1 + T G UCEC 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTGCCATACGGATGGGAACAAGAAACGGATGAGAACGGA < 41bp 1 0.422559487470321 1 0.444598853588104 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143703 stoploss 0.995 0 29 hm5C_associated_SNPs_43342 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:78143683-78143710
64251 chr2 113309368 113309368 1 + C A UCEC 113309353 + 113309333 113309373 41 CTTTTATTTTCTATTCTAGGCACTTGTCAGCTTTTCTGATT CTTTTATTTTCTATTCTAGGCACTTGTCAGCTTTTATGATT < 41bp 1 0.0684754848134016 1 0.0411527752876282 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR1B ENSG00000125630 CDS Human protein_coding chr2:113309353 chr2:113309368 nonsynonymous SNV 0.990 4 36 hm5C_associated_SNPs_43343 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:113309348-113309373
64251 chr11 810347 810347 1 + G T UCEC 810346 + 810326 810366 41 GTATCGAGGCGGACGACGACCGGCTCAACAAGGTAGCGGCC GTATCGAGGCGGACGACGACCTGCTCAACAAGGTAGCGGCC < 41bp 1 0.694870325284311 1 0.121892929077148 experiment 0.610259349431377 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPLP2 ENSG00000177600 CDS Human protein_coding chr11:810346 chr11:810347 nonsynonymous SNV 0.928 2 22 hm5C_associated_SNPs_43347 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:810231-810352
64251 chrX 73045669 73045669 1 - T C UCEC 73045684 - 73045664 73045704 41 TGGGAAGTTGATTTAAATGACTGATAATGTGTATGAAAGCA TGGGAAGTTGATTTAAATGACTGATAATGTGTATGGAAGCA < 41bp 1 0.065124024444336 1 0.0605373680591583 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73045684 chrX:73045669 . . 0 36 hm5C_associated_SNPs_43348 0 0 64 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr16 85840465 85840465 1 + C T UCEC 85840456 + 85840436 85840476 41 TTAGCCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAGAA TTAGCCTCCAAGTGGGACTACGAAAAGAATGAGTGGAAGAA < 41bp 1 0.749182546270689 1 0.317292422056198 experiment 0.501634907458622 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840456 chr16:85840465 synonymous SNV . 0 30 hm5C_associated_SNPs_43349 0 0 29 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:85840392-85840486
64251 chr8 56864629 56864629 1 + C T UCEC 56864624 + 56864604 56864644 41 TAATGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCT TAATGGGGGCTATTACATCTCTCCATGAATCACTTTTCCCT < 41bp 1 0.793648996697682 1 0.936168432235718 experiment 0.412702006604635 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control LYN ENSG00000254087 CDS Human protein_coding chr8:56864624 chr8:56864629 stopgain 0.997 1 26 hm5C_associated_SNPs_43350 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr16 842481 842481 1 + C A UCEC 842482 + 842462 842502 41 CATCCTGAACCGCAAGGGGCCACAGGAGGTGGGGCCACAGG CATCCTGAACCGCAAGGGGACACAGGAGGTGGGGCCACAGG < 41bp 1 0.530607199774287 1 0.215890467166901 experiment 0.938785600451426 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842482 chr16:842481 nonsynonymous SNV 0.005 0 20 hm5C_associated_SNPs_43351 0 0 1 PPIG POSTAR2 ENCODE chr16:842474-842506
64251 chr2 42886997 42886997 1 + A T UCEC 42886977 + 42886957 42886997 41 TAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCA TAGTTTGCATATGAGTGCTGCTGCAGCTTCCCGAGACATCT < 41bp 1 0.275659916474752 1 0.268521547317505 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTA3 ENSG00000057935 CDS Human protein_coding chr2:42886977 chr2:42886997 nonsynonymous SNV 0.997 1 41 hm5C_associated_SNPs_43353 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:42886971-42887002
64251 chr11 4112570 4112570 1 + G A UCEC 4112557 + 4112537 4112577 41 TCCTCCCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAA TCCTCCCTCCACATGAGTGACCGCCAGCGTGTGACCCCCAA < 41bp 1 0.155403087120557 1 0.0687461793422699 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STIM1 ENSG00000167323 CDS Human protein_coding chr11:4112557 chr11:4112570 nonsynonymous SNV 0.825 0 34 hm5C_associated_SNPs_43354 0 0 3 FXR2 POSTAR2 ENCODE chr11:4112540-4112590
64251 chr16 705346 705346 1 + G A UCEC 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGCGGCTCTGGCGACTGCGTGGCGGGGTGCTGCGT < 41bp 1 0.533166550248517 1 0.481648564338684 experiment 0.933666899502966 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705346 synonymous SNV . 0 20 hm5C_associated_SNPs_43355 0 0 3 PPIG POSTAR2 ENCODE chr16:705306-705371
64251 chr11 67018210 67018210 1 + C T UCEC 67018208 + 67018188 67018228 41 AGGTCTGGATGTCTGTCTTCCGCTACCTCAGCCGCAGAGAA AGGTCTGGATGTCTGTCTTCCGTTACCTCAGCCGCAGAGAA < 41bp 1 0.236189158309329 1 0.140258431434631 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018208 chr11:67018210 synonymous SNV . 0 23 hm5C_associated_SNPs_43356 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:67018196-67018228
64251 chr9 140611477 140611477 1 + G A UCEC 140611483 + 140611463 140611503 41 AGGGGCTGGCAAAGGCAGGACTCCAAGCGCTTTTCCCCAGA AGGGGCTGGCAAAGACAGGACTCCAAGCGCTTTTCCCCAGA < 41bp 1 0.770156530220762 1 0.954498767852783 experiment 0.459686939558476 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EHMT1 ENSG00000181090 CDS Human protein_coding chr9:140611483 chr9:140611477 nonsynonymous SNV 0.674 3 15 hm5C_associated_SNPs_43357 0 0 1 GRWD1 POSTAR2 ENCODE chr9:140611336-140611485
64251 chr11 837591 837591 1 + C G UCEC 837583 + 837563 837603 41 CGGTGGTGGCTCTTTGTGGGCAGCGAGACCATGCCTCCAAC CGGTGGTGGCTCTTTGTGGGCAGCGAGAGCATGCCTCCAAC < 41bp 1 0.791687342001968 1 0.277997374534607 experiment 0.416625315996063 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD151 ENSG00000177697 CDS Human protein_coding chr11:837583 chr11:837591 nonsynonymous SNV 0.916 0 29 hm5C_associated_SNPs_43359 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:837589-837612
64251 chr3 57898200 57898200 1 + C T UCEC 57898199 + 57898179 57898219 41 AGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCT AGAGATGAATTGCTTAGTGCCTGAGATGAAATTTTGCTCCT < 41bp 1 0.760804194203135 1 0.643273293972015 experiment 0.47839161159373 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898199 chr3:57898200 stopgain 0.988 1 22 hm5C_associated_SNPs_43360 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:57898171-57898202
64251 chr14 105959048 105959048 1 + G A UCEC 105959051 + 105959031 105959071 41 TGGTGTCCAGTCAGCAGGAGCAGTGCGCCCTCCTGAGCAAG TGGTGTCCAGTCAGCAGAAGCAGTGCGCCCTCCTGAGCAAG < 41bp 1 0.387190834469223 1 0.281623989343643 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105959051 chr14:105959048 nonsynonymous SNV 0.998 4 18 hm5C_associated_SNPs_43361 0 0 1 PPIG POSTAR2 ENCODE chr14:105959017-105959062
64251 chr1 23408755 23408755 1 + G A UCEC 23408765 + 23408745 23408785 41 TGATCCCTGGGCTCGGGGCTCTTATTCCTATGTTGCTGCAG TGATCCCTGGACTCGGGGCTCTTATTCCTATGTTGCTGCAG < 41bp 1 0.123860500640321 1 0.101054280996323 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control KDM1A ENSG00000004487 CDS Human protein_coding chr1:23408765 chr1:23408755 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_43362 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr1:23408723-23408767
64251 chr14 102484866 102484866 1 + C T UCEC 102484854 + 102484834 102484874 41 GCCTCCCTCACACAGATCTACGGCACCTTCAACCGCGCCAT GCCTCCCTCACACAGATCTACGGCACCTTCAATCGCGCCAT < 41bp 1 0.397353133360104 1 0.443766862154007 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102484854 chr14:102484866 synonymous SNV . 0 33 hm5C_associated_SNPs_43363 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr14:102484848-102484870
64251 chr14 102484866 102484866 1 + C T UCEC 102484872 + 102484852 102484892 41 TACGGCACCTTCAACCGCGCCATGCTGAGGCTCATTCCATC TACGGCACCTTCAATCGCGCCATGCTGAGGCTCATTCCATC < 41bp 1 0.0555281837197756 1 0.132000625133514 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102484872 chr14:102484866 synonymous SNV . 0 15 hm5C_associated_SNPs_43364 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr14:102484848-102484870
64251 chr19 803572 803572 1 + C G UCEC 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCGGGGATCTGAGGAGCTTTTCTCTACTT < 41bp 1 0.710710574352552 1 0.503421306610107 experiment 0.578578851294896 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803572 nonsynonymous SNV 0.970 0 25 hm5C_associated_SNPs_43365 0 0 25 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr5 149754338 149754338 1 + C T UCEC 149754323 + 149754303 149754343 41 GCGGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGA GCGGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGTGAGGA < 41bp 1 0.53105436138435 1 0.376139402389526 experiment 0.9378912772313 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754323 chr5:149754338 synonymous SNV . 0 36 hm5C_associated_SNPs_43366 1 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754338 149754338 1 + C T UCEC 149754325 + 149754305 149754345 41 GGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGCGAGGAAT GGGGAAGCGGGAGGAGGACTCGCAGAGCAGCAGTGAGGAAT < 41bp 1 0.695635069028145 1 0.723336696624756 experiment 0.60872986194371 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754325 chr5:149754338 synonymous SNV . 0 34 hm5C_associated_SNPs_43367 1 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chr5 149754338 149754338 1 + C T UCEC 149754335 + 149754315 149754355 41 GAGGAGGACTCGCAGAGCAGCAGCGAGGAATCGGACAGTGA GAGGAGGACTCGCAGAGCAGCAGTGAGGAATCGGACAGTGA < 41bp 1 0.330600488278397 1 0.214113026857376 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TCOF1 ENSG00000070814 CDS Human protein_coding chr5:149754335 chr5:149754338 synonymous SNV . 0 24 hm5C_associated_SNPs_43368 1 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149754309-149754339
64251 chrX 56591620 56591620 1 + G A UCEC 56591612 + 56591592 56591632 41 AGCTCCCAGCCTTCCTGCAGCAGATGCAGAATCCAGACACA AGCTCCCAGCCTTCCTGCAGCAGATGCAAAATCCAGACACA < 41bp 1 0.382817710697224 1 0.384106308221817 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591612 chrX:56591620 synonymous SNV . 0 29 hm5C_associated_SNPs_43369 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:56591620-56591640
64251 chr1 26136184 26136184 1 + G A UCEC 26136177 + 26136157 26136197 41 GATCCCCTTCCCCACAGGATCCATGCCGAGTTCCAGCTCAG GATCCCCTTCCCCACAGGATCCATGCCAAGTTCCAGCTCAG < 41bp 1 0.0944447652404557 1 0.0377747714519501 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136177 chr1:26136184 nonsynonymous SNV 0.944 5 28 hm5C_associated_SNPs_43370 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:26136180-26136200
64251 chr17 4797386 4797386 1 + C T UCEC 4797367 + 4797347 4797387 41 ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGCG ACCCAGCCCCCATACGGGGGCGGCACCATGGTGGTCCAGTG < 41bp 1 0.478839863287739 1 0.170426100492477 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797367 chr17:4797386 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_43371 0 0 1 PPIG POSTAR2 ENCODE chr17:4797349-4797387
64251 chr20 32665002 32665002 1 + G A UCEC 32664995 + 32664975 32665015 41 GCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGAT GCCTGCCCCAGGGGGAAGCACGGACCCAAGACGACGGCGAT < 41bp 1 0.395771171421529 1 0.774309992790222 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664995 chr20:32665002 nonsynonymous SNV 0.029 0 28 hm5C_associated_SNPs_43372 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665002 32665002 1 + G A UCEC 32664999 + 32664979 32665019 41 GCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGG GCCCCAGGGGGAAGCACGGACCCAAGACGACGGCGATGAGG < 41bp 1 0.573093078546112 1 0.257423669099808 experiment 0.853813842907776 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664999 chr20:32665002 nonsynonymous SNV 0.029 0 24 hm5C_associated_SNPs_43373 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665002 32665002 1 + G A UCEC 32665000 + 32664980 32665020 41 CCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA CCCCAGGGGGAAGCACGGACCCAAGACGACGGCGATGAGGA < 41bp 1 0.223795918970785 1 0.403342008590698 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665000 chr20:32665002 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_43374 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr16 85839355 85839355 1 + C A UCEC 85839335 + 85839315 85839355 41 AATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTC AATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTA < 41bp 1 0.41532518145238 1 0.427894115447998 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85839335 chr16:85839355 nonsynonymous SNV 0.843 3 41 hm5C_associated_SNPs_43375 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:85839313-85839401
64251 chr16 85839355 85839355 1 + C A UCEC 85839336 + 85839316 85839356 41 ATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTCA ATGGCTGTCCTCTCTGCCCCCAGTGTATCGCATTAAGTTAA < 41bp 1 0.501625699688772 1 0.793993651866913 experiment 0.996748600622457 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85839336 chr16:85839355 nonsynonymous SNV 0.843 3 40 hm5C_associated_SNPs_43376 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:85839313-85839401
64251 chr1 32620231 32620231 1 + G C UCEC 32620232 + 32620212 32620252 41 GACAATTATCGAATGAAGAGCTATAAGAACAATGCTCTAAA GACAATTATCGAATGAAGACCTATAAGAACAATGCTCTAAA < 41bp 1 0.250764770322725 1 0.333719849586487 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620232 chr1:32620231 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_43378 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32620203-32620233
64251 chr1 32620231 32620231 1 + G C UCEC 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGACCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA < 41bp 1 0.328140128686102 1 0.137161135673523 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620231 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_43379 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32620203-32620233
64251 chr1 32620231 32620231 1 + G C UCEC 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGACCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA < 41bp 1 0.275096821699593 1 0.279112696647644 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620231 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_43380 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32620203-32620233
64251 chr10 105185080 105185080 1 + A G UCEC 105185079 + 105185059 105185099 41 ATAAAGAAGCACACCCTCTCCATCGGGGACATGGTCACAGG ATAAAGAAGCACACCCTCTCCGTCGGGGACATGGTCACAGG < 41bp 1 0.373227660803813 1 0.474843561649323 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105185079 chr10:105185080 nonsynonymous SNV 0.644 1 22 hm5C_associated_SNPs_43381 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:105185040-105185160
64251 chr11 244732 244732 1 + T G UCEC 244747 + 244727 244767 41 TAAAATTAAACATCGGGGACCTACAGGTTACAAAGGTGAGA TAAAAGTAAACATCGGGGACCTACAGGTTACAAAGGTGAGA < 41bp 1 0.335293684061981 1 0.179504692554474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMD13 ENSG00000185627 CDS Human protein_coding chr11:244747 chr11:244732 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_43384 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:244723-244752
64251 chr1 171501740 171501740 1 + G A UCEC 171501758 + 171501738 171501778 41 AGGAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT AGAAAATTAGGGAAAGGGAGCGAGAAAAAGAACGGGAGCGT < 41bp 1 0.603517121223178 1 0.716052353382111 experiment 0.792965757553645 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171501758 chr1:171501740 nonsynonymous SNV 0.996 2 3 hm5C_associated_SNPs_43385 0 0 27 NOP58 POSTAR2 GSE43666,GSM1067861 chr1:171501711-171501749
64251 chr7 98601886 98601886 1 + C A UCEC 98601905 + 98601885 98601925 41 TCTTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC TATTGGAGGCCAAGACCAAGCAACTCCCCAAATTCTTCCTC < 41bp 1 0.124816340097857 1 0.547884702682495 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98601905 chr7:98601886 synonymous SNV . 0 2 hm5C_associated_SNPs_43386 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:98601856-98601894
64251 chr20 11900401 11900401 1 + G A UCEC 11900386 + 11900366 11900406 41 TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCGATGTT TATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCAATGTT < 41bp 1 0.189215368261748 1 0.162416636943817 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11900386 chr20:11900401 synonymous SNV . 0 36 hm5C_associated_SNPs_43387 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:11900373-11900439
64251 chr12 51034576 51034576 1 + C A UCEC 51034590 + 51034570 51034610 41 CTTCTGCTCCCTCTAAGTACCACCGAACTCGATCTGGGGGA CTTCTGATCCCTCTAAGTACCACCGAACTCGATCTGGGGGA < 41bp 1 0.692055172261449 1 0.75525975227356 experiment 0.615889655477103 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51034590 chr12:51034576 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_43388 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr12:51034563-51034594
64251 chr15 99460097 99460097 1 + C A UCEC 99460083 + 99460063 99460103 41 AAGTCTTTGAGAATTTCCTGCACAACTCCATCTTCGTGCCC AAGTCTTTGAGAATTTCCTGCACAACTCCATCTTAGTGCCC < 41bp 1 0.194264971276407 1 0.193387925624847 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99460083 chr15:99460097 nonsynonymous SNV 0.959 3 35 hm5C_associated_SNPs_43390 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:99460073-99460098
64251 chr15 99460097 99460097 1 + C A UCEC 99460103 + 99460083 99460123 41 CACAACTCCATCTTCGTGCCCAGGTACCCAGCTCATGTGAA CACAACTCCATCTTAGTGCCCAGGTACCCAGCTCATGTGAA < 41bp 1 0.177924870699106 1 0.271010726690292 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99460103 chr15:99460097 nonsynonymous SNV 0.959 3 15 hm5C_associated_SNPs_43391 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:99460073-99460098
64251 chr5 92921100 92921100 1 + C T UCEC 92921110 + 92921090 92921130 41 ACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA ACATGCCGTGTCAACAGGAACTGTCCCATCGACCAGCACCA < 41bp 1 0.0894009286577803 1 0.0687248706817627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92921110 chr5:92921100 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_43392 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:92921056-92921105
64251 chr2 32824930 32824930 1 + G T UCEC 32824918 + 32824898 32824938 41 TCTTGTGAATCTAGAGACAACTGGTGGTCATAGCGTGCGAT TCTTGTGAATCTAGAGACAACTGGTGGTCATATCGTGCGAT < 41bp 1 0.243708295415335 1 0.516102910041809 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824918 chr2:32824930 nonsynonymous SNV 0.997 4 33 hm5C_associated_SNPs_43393 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr2 32824930 32824930 1 + G T UCEC 32824931 + 32824911 32824951 41 GAGACAACTGGTGGTCATAGCGTGCGATTCAATCCAAACCT GAGACAACTGGTGGTCATATCGTGCGATTCAATCCAAACCT < 41bp 1 0.151593276905594 1 0.634854853153229 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32824931 chr2:32824930 nonsynonymous SNV 0.997 4 20 hm5C_associated_SNPs_43394 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:32824916-32824936
64251 chr16 57153147 57153147 1 + A G UCEC 57153128 + 57153108 57153148 41 ACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAG ACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAGG < 41bp 1 0.0551100824294843 1 0.0546999275684357 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57153128 chr16:57153147 nonsynonymous SNV 0.994 3 40 hm5C_associated_SNPs_43395 0 0 1 PPIG POSTAR2 ENCODE chr16:57153132-57153192
64251 chr11 107966303 107966303 1 + C T UCEC 107966308 + 107966288 107966328 41 ATTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCA ATTTGGAGGTAACCATGTTTCAGCTCGCTGTATTGTTTGCA < 41bp 1 0.50820057484129 1 0.459298640489578 experiment 0.98359885031742 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107966308 chr11:107966303 nonsynonymous SNV 0.998 4 16 hm5C_associated_SNPs_43398 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:107966259-107966343
64251 chr3 101520151 101520151 1 + G T UCEC 101520149 + 101520129 101520169 41 GTTTGTTTCCTCCCAGGTGACAGGAATTAGCCGAAATCCCT GTTTGTTTCCTCCCAGGTGACATGAATTAGCCGAAATCCCT < 41bp 1 0.585902691185037 1 0.128760069608688 experiment 0.828194617629925 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101520149 chr3:101520151 stopgain 0.414 0 23 hm5C_associated_SNPs_43400 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:101520133-101520172
64251 chr8 107752593 107752593 1 + G T UCEC 107752575 + 107752555 107752595 41 ACTTTGTTTTCTAAAGCTTACCAAGCATCTTCCACCAAGAA ACTTTGTTTTCTAAAGCTTACCAAGCATCTTCCACCAATAA < 41bp 1 0.0689776893574875 1 0.0378376245498657 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient OXR1 ENSG00000164830 CDS Human protein_coding chr8:107752575 chr8:107752593 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_43403 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr8:107752579-107752640
64251 chr12 104335638 104335638 1 + T C UCEC 104335627 + 104335607 104335647 41 AAGGTGGACTCAGATGATCTCCCCTTGAATGTTTCCCGCGA AAGGTGGACTCAGATGATCTCCCCTTGAATGCTTCCCGCGA < 41bp 1 0.313752827692736 1 0.363022804260254 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335627 chr12:104335638 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_43405 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104335617-104335667
64251 chr6 87967461 87967461 1 + G T UCEC 87967481 + 87967461 87967501 41 GATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC TATGGGAAATTTATCTGTAGCAGGTGTTACAGGGCTTTTAC < 41bp 1 0.588065172378051 1 0.582226157188416 experiment 0.823869655243898 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87967481 chr6:87967461 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_43409 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:87967449-87967477
64251 chr17 46189967 46189967 1 + G A UCEC 46189985 + 46189965 46190005 41 CCGAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT CCAAGTGCAGAATGAGGGCTCCTGGAACTCTTATGTGGATT < 41bp 1 0.139737931330738 1 0.290364325046539 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX11 ENSG00000002919 CDS Human protein_coding chr17:46189985 chr17:46189967 nonsynonymous SNV 0.997 3 3 hm5C_associated_SNPs_43411 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:46189941-46189971
64251 chr3 39431984 39431984 1 + A G UCEC 39431995 + 39431975 39432015 41 GGCCTTTGGAAAGGGATGTCCCCTGTAAGCTGCCATCTGGG GGCCTTTGGGAAGGGATGTCCCCTGTAAGCTGCCATCTGGG < 41bp 1 0.316680767814767 1 0.236603528261185 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431995 chr3:39431984 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_43414 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:39431967-39431989
64251 chr15 99434709 99434709 1 + C T UCEC 99434698 + 99434678 99434718 41 CTATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCT CTATGCCGGTGTCTGTGTGCCTGCCTGCCCGTCCAACACCT < 41bp 1 0.271794796795462 1 0.300463676452637 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99434698 chr15:99434709 nonsynonymous SNV 0.878 2 32 hm5C_associated_SNPs_43415 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:99434677-99434714
64251 chr6 31593365 31593365 1 + T C UCEC 31593346 + 31593326 31593366 41 GGTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTA GGTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCA < 41bp 1 0.221976513151579 1 0.064331442117691 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593346 chr6:31593365 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_43418 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593347 + 31593327 31593367 41 GTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTAC GTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCAC < 41bp 1 0.162167109191247 1 0.0985339879989624 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593347 chr6:31593365 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_43419 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593348 + 31593328 31593368 41 TGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACC TGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCACC < 41bp 1 0.272825118414368 1 0.0827682912349701 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593348 chr6:31593365 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_43420 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593350 + 31593330 31593370 41 GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCACCGC < 41bp 1 0.592297399667199 1 0.354897022247314 experiment 0.815405200665601 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593350 chr6:31593365 nonsynonymous SNV 1.000 2 36 hm5C_associated_SNPs_43421 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCACCGCG < 41bp 1 0.389244006537744 1 0.125841170549393 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593365 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_43422 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCACCGCGG < 41bp 1 0.356399506881867 1 0.149693250656128 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593365 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_43423 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593365 31593365 1 + T C UCEC 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCCACCGCGGA < 41bp 1 0.308111394465683 1 0.435111731290817 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593365 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_43424 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr17 57725631 57725631 1 + T A UCEC 57725620 + 57725600 57725640 41 GCAAAATCGTGTGGTGGGAGCTATGCAGCTATATTCTGTAG GCAAAATCGTGTGGTGGGAGCTATGCAGCTAAATTCTGTAG < 41bp 1 0.192736770458388 1 0.0679200887680054 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57725620 chr17:57725631 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_43426 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:57725620-57725640
64251 chr1 193205402 193205402 1 + G A UCEC 193205390 + 193205370 193205410 41 ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCGTTTTTGTG ACTTTTCTACTTGTAGGGACCGCGTTGTAGCCATTTTTGTG < 41bp 1 0.677150237417394 1 0.144496351480484 experiment 0.645699525165212 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC73 ENSG00000134371 CDS Human protein_coding chr1:193205390 chr1:193205402 nonsynonymous SNV 0.967 3 33 hm5C_associated_SNPs_43427 1 0 4 U2AF1 POSTAR2 ENCODE chr1:193205372-193205441
64251 chr4 30725911 30725911 1 + C A UCEC 30725920 + 30725900 30725940 41 CACTGTGGAGGCTTCTAAGCCAAATGGACAGAGGTATGATA CACTGTGGAGGATTCTAAGCCAAATGGACAGAGGTATGATA < 41bp 1 0.110352606496641 1 0.678548336029053 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30725920 chr4:30725911 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_43428 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30725866-30725952
64251 chr12 57910042 57910042 1 + G A UCEC 57910022 + 57910002 57910042 41 CTGGTGATAACTTTGTTGTTCTCCAGGCAAAAACGTCCCCG CTGGTGATAACTTTGTTGTTCTCCAGGCAAAAACGTCCCCA < 41bp 1 0.426891761479291 1 0.801587820053101 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57910022 chr12:57910042 synonymous SNV . 0 41 hm5C_associated_SNPs_43429 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917662 chr12:57910020-57910060
64251 chr21 17250136 17250136 1 + G T UCEC 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAATTAAATGAGCAAGCCGCATAACTCTTCGAATCTG < 41bp 1 0.480914094501665 1 0.29080206155777 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250136 stopgain 0.937 1 26 hm5C_associated_SNPs_43430 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chrX 24755785 24755785 1 + G T UCEC 24755775 + 24755755 24755795 41 ATGGGTTTGAACTGGAAGTACTACTGCAGAGAATTAATGTG ATGGGTTTGAACTGGAAGTACTACTGCAGATAATTAATGTG < 41bp 1 0.15503892297646 1 0.0880051255226135 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLA1 ENSG00000101868 CDS Human protein_coding chrX:24755775 chrX:24755785 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_43433 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:24755751-24755789
64251 chr7 99123772 99123772 1 + G A UCEC 99123761 + 99123741 99123781 41 AACTTTATTCAGCATCGGCGCATCCACACTGGAGAAAAACC AACTTTATTCAGCATCGGCGCATCCACACTGAAGAAAAACC < 41bp 1 0.0268601808295762 1 0.207065403461456 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123761 chr7:99123772 nonsynonymous SNV 1.000 3 32 hm5C_associated_SNPs_43434 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:99123750-99123780
64251 chr1 45270018 45270018 1 + G T UCEC 45270016 + 45269996 45270036 41 CCTCTCCCATGACAGCGGAACAGAACCCGGCCCCCCTGGCC CCTCTCCCATGACAGCGGAACATAACCCGGCCCCCCTGGCC < 41bp 1 0.266124910567363 1 0.0915399789810181 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLK3 ENSG00000173846 CDS Human protein_coding chr1:45270016 chr1:45270018 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_43435 0 0 8 EFTUD2 POSTAR2 ENCODE chr1:45270006-45270032
64251 chr1 44684034 44684034 1 + G A UCEC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACAATGAT < 41bp 1 0.536179666652938 1 0.355637282133102 experiment 0.927640666694123 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684034 nonsynonymous SNV 0.948 1 36 hm5C_associated_SNPs_43437 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:44684024-44684054
64251 chr6 57012307 57012307 1 + A C UCEC 57012315 + 57012295 57012335 41 CCTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGAT CCTGGTTCTGTGCATGCAATCAGCGATTCCCAAGTGAAGAT < 41bp 1 0.532358003858292 1 0.562111616134644 experiment 0.935283992283417 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012315 chr6:57012307 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_43438 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr6:57012259-57012317
64251 chr3 32188122 32188122 1 + G T UCEC 32188133 + 32188113 32188153 41 GGCAGCAAAGTAATGGAGAACGGCCTTCTCTTCAAAGAACT GGCAGCAAATTAATGGAGAACGGCCTTCTCTTCAAAGAACT < 41bp 1 0.258488698396939 1 0.441197991371155 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GPD1L ENSG00000152642 CDS Human protein_coding chr3:32188133 chr3:32188122 nonsynonymous SNV 0.969 0 10 hm5C_associated_SNPs_43439 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:32188122-32188123
64251 chr16 53358256 53358256 1 + C T UCEC 53358269 + 53358249 53358289 41 CATGCTGCTGTCAGGAATGGCTGGATTACCAAATCTGTTGG CATGCTGTTGTCAGGAATGGCTGGATTACCAAATCTGTTGG < 41bp 1 0.769855025076035 1 0.889201462268829 experiment 0.460289949847931 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD9 ENSG00000177200 CDS Human protein_coding chr16:53358269 chr16:53358256 synonymous SNV . 0 8 hm5C_associated_SNPs_43440 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:53358238-53358258
64251 chr10 93713510 93713510 1 + A C UCEC 93713504 + 93713484 93713524 41 ATTCTTTTAGACTCTTCAGGCAGCTGAATTGATTGACTCAG ATTCTTTTAGACTCTTCAGGCAGCTGCATTGATTGACTCAG < 41bp 1 0.311959756668399 1 0.54978221654892 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93713504 chr10:93713510 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_43442 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:93713500-93713522
64251 chr7 44741208 44741208 1 + C T UCEC 44741191 + 44741171 44741211 41 GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGCTTC GCGCCACCCCGAGGCCAGATCCAGCTTTGATGAGATGTTTC < 41bp 1 0.184657163958509 1 0.630326449871063 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGDH ENSG00000105953 CDS Human protein_coding chr7:44741191 chr7:44741208 nonsynonymous SNV 0.990 1 38 hm5C_associated_SNPs_43445 0 0 2 PRPF8 POSTAR2 ENCODE chr7:44741169-44741257
64251 chr7 116422057 116422057 1 + G T UCEC 116422045 + 116422025 116422065 41 ACTCTCTTTGACTGCAGAATCCAACTGTAAAAGATCTTATT ACTCTCTTTGACTGCAGAATCCAACTGTAAAATATCTTATT < 41bp 1 0.119440432429808 1 0.394179463386536 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MET ENSG00000105976 CDS Human protein_coding chr7:116422045 chr7:116422057 nonsynonymous SNV 1.000 5 33 hm5C_associated_SNPs_43446 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:116422057-116422081
64251 chr2 233684608 233684608 1 + G A UCEC 233684606 + 233684586 233684626 41 AGCGAGAAGAGGAAGAAAGACAGCAGCAAGAAGAAGCTCTT AGCGAGAAGAGGAAGAAAGACAACAGCAAGAAGAAGCTCTT < 41bp 1 0.730100915457213 1 0.773009657859802 experiment 0.539798169085574 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684606 chr2:233684608 synonymous SNV . 0 23 hm5C_associated_SNPs_43449 0 0 14 AGGF1 POSTAR2 ENCODE chr2:233684530-233684611
64251 chr2 233684608 233684608 1 + G A UCEC 233684612 + 233684592 233684632 41 AAGAGGAAGAAAGACAGCAGCAAGAAGAAGCTCTTAGAAGA AAGAGGAAGAAAGACAACAGCAAGAAGAAGCTCTTAGAAGA < 41bp 1 0.685237559547541 1 0.616708099842072 experiment 0.629524880904917 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684612 chr2:233684608 synonymous SNV . 0 17 hm5C_associated_SNPs_43450 0 0 14 AGGF1 POSTAR2 ENCODE chr2:233684530-233684611
64251 chr2 233684608 233684608 1 + G A UCEC 233684622 + 233684602 233684642 41 AAGACAGCAGCAAGAAGAAGCTCTTAGAAGACTGGAAGAGA AAGACAACAGCAAGAAGAAGCTCTTAGAAGACTGGAAGAGA < 41bp 1 0.123802873006713 1 0.256164371967316 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233684622 chr2:233684608 synonymous SNV . 0 7 hm5C_associated_SNPs_43451 0 0 14 AGGF1 POSTAR2 ENCODE chr2:233684530-233684611
64251 chr6 36442601 36442601 1 + C A UCEC 36442596 + 36442576 36442616 41 TGACTATGCCTCTCAGCCAGCAAATCTTCAGTTCCCTCACA TGACTATGCCTCTCAGCCAGCAAATATTCAGTTCCCTCACA < 41bp 1 0.19448689921246 1 0.230979084968567 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36442596 chr6:36442601 nonsynonymous SNV 0.983 0 26 hm5C_associated_SNPs_43452 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:36442575-36442613
64251 chr4 144438535 144438535 1 + A C UCEC 144438549 + 144438529 144438569 41 CCTGGAAAGCAAAAGGAAATCCAAGAACCAGATCCTACCTA CCTGGACAGCAAAAGGAAATCCAAGAACCAGATCCTACCTA < 41bp 1 0.385787882207125 1 0.492017060518265 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144438549 chr4:144438535 nonsynonymous SNV 0.998 2 7 hm5C_associated_SNPs_43454 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:144438514-144438538
64251 chr3 112713993 112713993 1 + G T UCEC 112714008 + 112713988 112714028 41 ACAAAGAAAATGAATTTTTTCAAAGTTGGAAAACATTTTAC ACAAATAAAATGAATTTTTTCAAAGTTGGAAAACATTTTAC < 41bp 1 0.558361880620527 1 0.761259913444519 experiment 0.883276238758946 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112714008 chr3:112713993 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_43455 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:112713954-112713993
64251 chr5 61778972 61778972 1 + A G UCEC 61778983 + 61778963 61779003 41 TACTCCTCTAATTCAGAGATCACTGGAATTTTCTGTAAGCT TACTCCTCTGATTCAGAGATCACTGGAATTTTCTGTAAGCT < 41bp 1 0.152956426970439 1 0.132145136594772 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IPO11 ENSG00000086200 CDS Human protein_coding chr5:61778983 chr5:61778972 synonymous SNV . 0 10 hm5C_associated_SNPs_43456 0 0 26 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:61778927-61778975
64251 chr1 236347187 236347187 1 + G T UCEC 236347193 + 236347173 236347213 41 TTTCTTCCGAGTTAGAAATCCTACAAAGGACCTTGTAAGTA TTTCTTCCGAGTTATAAATCCTACAAAGGACCTTGTAAGTA < 41bp 1 0.616696752792456 1 0.232986807823181 experiment 0.766606494415089 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GPR137B ENSG00000077585 CDS Human protein_coding chr1:236347193 chr1:236347187 nonsynonymous SNV 0.847 4 15 hm5C_associated_SNPs_43457 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:236347168-236347189
64251 chr3 179424772 179424772 1 + G T UCEC 179424778 + 179424758 179424798 41 TCTCCATACAGAAAGCAGGACCCAGACACGTGGGAAAATGA TCTCCATACAGAAATCAGGACCCAGACACGTGGGAAAATGA < 41bp 1 0.048759590040347 1 0.0817404985427856 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179424778 chr3:179424772 nonsynonymous SNV 0.995 2 15 hm5C_associated_SNPs_43458 0 0 1 GRWD1 POSTAR2 ENCODE chr3:179424722-179424783
64251 chr17 65908108 65908108 1 + A G UCEC 65908112 + 65908092 65908132 41 GAAGAAATTAGAGGAGAGACCAGTTAATAAATGTAGTGATC GAAGAAATTAGAGGAGGGACCAGTTAATAAATGTAGTGATC < 41bp 1 0.0947891932595961 1 0.224953204393387 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65908112 chr17:65908108 nonsynonymous SNV 0.210 0 17 hm5C_associated_SNPs_43459 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:65908076-65908108
64251 chr17 30293190 30293190 1 + G A UCEC 30293195 + 30293175 30293215 41 TCATTTGCAGCTTACGTTTACTGGTTTCTTCCACAAAAATG TCATTTGCAGCTTACATTTACTGGTTTCTTCCACAAAAATG < 41bp 1 0.506117204126173 1 0.159992009401321 experiment 0.987765591747654 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30293195 chr17:30293190 synonymous SNV . 0 16 hm5C_associated_SNPs_43461 0 0 12 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:30293165-30293190
64251 chr5 137734038 137734038 1 + C T UCEC 137734024 + 137734004 137734044 41 TCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTCGTAATG TCCTGGCCAATGTTGGGGACCAGTTCTGCCAGCTTGTAATG < 41bp 1 0.145528672689493 1 0.0355956256389618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM3B ENSG00000120733 CDS Human protein_coding chr5:137734024 chr5:137734038 synonymous SNV . 0 35 hm5C_associated_SNPs_43462 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137734016-137734039
64251 chr16 30995246 30995246 1 + G A UCEC 30995266 + 30995246 30995286 41 GTGGACGAGGAGATCACCTACGACTACAAGTTCCCACTGGA ATGGACGAGGAGATCACCTACGACTACAAGTTCCCACTGGA < 41bp 1 0.196352729992452 1 0.392379075288773 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SETD1A ENSG00000099381 CDS Human protein_coding chr16:30995266 chr16:30995246 nonsynonymous SNV 0.992 3 1 hm5C_associated_SNPs_43463 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30995185-30995285
64251 chrX 102632699 102632699 1 + A G UCEC 102632708 + 102632688 102632728 41 TGCGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCAT TGCGTATCCTTGTGGGGGAGCTCTCTAATCACCATGACCAT < 41bp 1 0.149673175795602 1 0.0611779689788818 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632708 chrX:102632699 nonsynonymous SNV 0.995 0 12 hm5C_associated_SNPs_43464 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632699 102632699 1 + A G UCEC 102632710 + 102632690 102632730 41 CGTATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCA CGTATCCTTGTGGGGGAGCTCTCTAATCACCATGACCATCA < 41bp 1 0.798224882379932 1 0.365164011716843 experiment 0.403550235240136 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632710 chrX:102632699 nonsynonymous SNV 0.995 0 10 hm5C_associated_SNPs_43465 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chrX 102632699 102632699 1 + A G UCEC 102632712 + 102632692 102632732 41 TATCCTTATGGGGGAGCTCTCTAATCACCATGACCATCATG TATCCTTGTGGGGGAGCTCTCTAATCACCATGACCATCATG < 41bp 1 0.468706176687246 1 0.284228891134262 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632712 chrX:102632699 nonsynonymous SNV 0.995 0 8 hm5C_associated_SNPs_43466 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102632575-102632998
64251 chr19 11096047 11096047 1 + G C UCEC 11096032 + 11096012 11096052 41 ATGGGGATGCGGTCAGGGGGCCATGCTGGGATGGGGCCCCC ATGGGGATGCGGTCAGGGGGCCATGCTGGGATGGGCCCCCC < 41bp 1 0.305293480083015 1 0.447842568159103 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11096032 chr19:11096047 synonymous SNV . 0 36 hm5C_associated_SNPs_43467 0 0 6 FMR1 POSTAR2 ENCODE chr19:11096031-11096053
64251 chr7 150765087 150765087 1 + G A UCEC 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACATGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG < 41bp 1 0.569239630347865 1 0.341610968112946 experiment 0.86152073930427 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765087 nonsynonymous SNV 0.834 3 4 hm5C_associated_SNPs_43470 0 0 5 FMR1 POSTAR2 ENCODE chr7:150765042-150765100
64251 chr7 150765087 150765087 1 + G A UCEC 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACATGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC < 41bp 1 0.528736749642333 1 0.646806120872498 experiment 0.942526500715334 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765087 nonsynonymous SNV 0.834 3 3 hm5C_associated_SNPs_43471 0 0 5 FMR1 POSTAR2 ENCODE chr7:150765042-150765100
64251 chr19 39950551 39950551 1 + C T UCEC 39950544 + 39950524 39950564 41 TCTTCCAGATTGGGGAGGAACGGGCCACGGCCATTTCCTTG TCTTCCAGATTGGGGAGGAACGGGCCATGGCCATTTCCTTG < 41bp 1 0.762412552706571 1 0.624528527259827 experiment 0.475174894586857 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39950544 chr19:39950551 nonsynonymous SNV 0.902 4 28 hm5C_associated_SNPs_43472 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39950529-39950561
64251 chr19 36216171 36216171 1 + C T UCEC 36216159 + 36216139 36216179 41 AACGTGTGGCTGATGGGGGGCCTGAGTGTGCTCACCTCTGT AACGTGTGGCTGATGGGGGGCCTGAGTGTGCTTACCTCTGT < 41bp 1 0.138730095468439 1 0.114303767681122 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216159 chr19:36216171 synonymous SNV . 0 33 hm5C_associated_SNPs_43473 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216171 36216171 1 + C T UCEC 36216160 + 36216140 36216180 41 ACGTGTGGCTGATGGGGGGCCTGAGTGTGCTCACCTCTGTG ACGTGTGGCTGATGGGGGGCCTGAGTGTGCTTACCTCTGTG < 41bp 1 0.323519946547047 1 0.199014574289322 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216160 chr19:36216171 synonymous SNV . 0 32 hm5C_associated_SNPs_43474 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216171 36216171 1 + C T UCEC 36216189 + 36216169 36216209 41 CTCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCT CTTACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCT < 41bp 1 0.0165121796073908 1 0.0886060893535614 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216189 chr19:36216171 synonymous SNV . 0 3 hm5C_associated_SNPs_43475 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216171 36216171 1 + C T UCEC 36216190 + 36216170 36216210 41 TCACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTG TTACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTG < 41bp 1 0.043386661082036 1 0.14202806353569 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216190 chr19:36216171 synonymous SNV . 0 2 hm5C_associated_SNPs_43476 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr19 36216171 36216171 1 + C T UCEC 36216191 + 36216171 36216211 41 CACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGT TACCTCTGTGCCAGGGGGCCCCCCGATGGTGTGCTTGCTGT < 41bp 1 0.0999940781893133 1 0.231186151504517 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KMT2B ENSG00000272333 CDS Human protein_coding chr19:36216191 chr19:36216171 synonymous SNV . 0 1 hm5C_associated_SNPs_43477 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr19:36216136-36216210
64251 chr17 29560163 29560163 1 + A G UCEC 29560175 + 29560155 29560195 41 TGGTCACAATGATGGGTGATCAAGGAGAACTCCCTATAGCG TGGTCACAGTGATGGGTGATCAAGGAGAACTCCCTATAGCG < 41bp 1 0.548254265308645 1 0.869936347007751 experiment 0.903491469382709 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29560175 chr17:29560163 nonsynonymous SNV 0.997 3 9 hm5C_associated_SNPs_43478 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr17:29560121-29560164
64251 chr12 109684161 109684161 1 + G A UCEC 109684168 + 109684148 109684188 41 TCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTATTG TCCCAAAATTTACATGGCAGCCAACAGTGGCGCCCGTATTG < 41bp 1 0.0278769077744773 1 0.190533757209778 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109684168 chr12:109684161 nonsynonymous SNV 0.996 3 14 hm5C_associated_SNPs_43479 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:109684153-109684170
64251 chr11 65269948 65269948 1 + A G UCEC 65269963 + 65269943 65269983 41 AAACAAGATGTTAAGGTATGCTTCAAAAATTTTGTAAATTG AAACAGGATGTTAAGGTATGCTTCAAAAATTTTGTAAATTG < 41bp 1 0.239463709730179 1 0.227199733257294 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65269963 chr11:65269948 . . 0 6 hm5C_associated_SNPs_43480 0 0 61 PTBP1 POSTAR2 GSE19323,GSM480478 chr11:65269900-65269960
64251 chr11 61913176 61913176 1 + C T UCEC 61913174 + 61913154 61913194 41 GAAGATGGAGGAGGTGGAAGCACGCAGGAAGCAGGAAGAGG GAAGATGGAGGAGGTGGAAGCATGCAGGAAGCAGGAAGAGG < 41bp 1 0.213380652473127 1 0.281797826290131 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout INCENP ENSG00000149503 CDS Human protein_coding chr11:61913174 chr11:61913176 nonsynonymous SNV 0.886 4 23 hm5C_associated_SNPs_43481 0 0 6 RBM15 POSTAR2 ENCODE chr11:61913170-61913237
64251 chr5 43650633 43650633 1 + C T UCEC 43650617 + 43650597 43650637 41 GGTTGGCACTGATGGGAGGACATTTGTATCCTTCCACAACT GGTTGGCACTGATGGGAGGACATTTGTATCCTTCCATAACT < 41bp 1 0.150757218928867 1 0.0311766564846039 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43650617 chr5:43650633 nonsynonymous SNV 0.986 1 37 hm5C_associated_SNPs_43482 0 0 10 FXR2 POSTAR2 GSE39682,GSM977620 chr5:43650622-43650643
64251 chr14 102478260 102478260 1 + G C UCEC 102478245 + 102478225 102478265 41 ATCAGATCACCCAGATCAATCATGGCCTGATGATGGTGGGG ATCAGATCACCCAGATCAATCATGGCCTGATGATGCTGGGG < 41bp 1 0.199437551380704 1 0.387377172708511 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478245 chr14:102478260 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_43483 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:102478238-102478260
64251 chr14 102478260 102478260 1 + G C UCEC 102478250 + 102478230 102478270 41 ATCACCCAGATCAATCATGGCCTGATGATGGTGGGGCCCTC ATCACCCAGATCAATCATGGCCTGATGATGCTGGGGCCCTC < 41bp 1 0.114445987089969 1 0.0786656439304352 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478250 chr14:102478260 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_43484 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:102478238-102478260
64251 chr14 102478260 102478260 1 + G C UCEC 102478266 + 102478246 102478286 41 ATGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGC ATGGCCTGATGATGCTGGGGCCCTCGGGAAGTGGGAAGAGC < 41bp 1 0.0103675154400143 1 0.0698511302471161 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478266 chr14:102478260 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_43485 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:102478238-102478260
64251 chr14 102478260 102478260 1 + G C UCEC 102478267 + 102478247 102478287 41 TGGCCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCA TGGCCTGATGATGCTGGGGCCCTCGGGAAGTGGGAAGAGCA < 41bp 1 0.0227083600055004 1 0.169730126857758 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478267 chr14:102478260 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_43486 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:102478238-102478260
64251 chr14 102478260 102478260 1 + G C UCEC 102478270 + 102478250 102478290 41 CCTGATGATGGTGGGGCCCTCGGGAAGTGGGAAGAGCATGG CCTGATGATGCTGGGGCCCTCGGGAAGTGGGAAGAGCATGG < 41bp 1 0.71228813353173 1 0.800089240074158 experiment 0.57542373293654 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102478270 chr14:102478260 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_43487 0 0 18 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:102478238-102478260
64251 chr11 62655922 62655922 1 + C A UCEC 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CGTTCTCCGCTGGGCCTGGACTATTCTCCTATATCCGCCAC < 41bp 1 0.352712494989042 1 0.156067341566086 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655922 synonymous SNV . 0 23 hm5C_associated_SNPs_43488 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:62655908-62655935
64251 chr6 158870105 158870105 1 + C T UCEC 158870090 + 158870070 158870110 41 TGCCACGGCAGAATGCTGGCCCACGTCCTCTTGCACGAGTC TGCCACGGCAGAATGCTGGCCCACGTCCTCTTGCATGAGTC < 41bp 1 0.110305141985997 1 0.0962307751178741 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TULP4 ENSG00000130338 CDS Human protein_coding chr6:158870090 chr6:158870105 synonymous SNV . 0 36 hm5C_associated_SNPs_43489 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:158870104-158870131
64251 chr19 49129249 49129249 1 + C T UCEC 49129246 + 49129226 49129266 41 CCCCCACCGCCACTGGCTGCCAGCACCCCGCTCCTCCATGG CCCCCACCGCCACTGGCTGCCAGTACCCCGCTCCTCCATGG < 41bp 1 0.551644854966032 1 0.455794751644135 experiment 0.896710290067936 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49129246 chr19:49129249 synonymous SNV . 0 24 hm5C_associated_SNPs_43490 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr19:49129248-49129249
64251 chr7 44100404 44100404 1 + C T UCEC 44100392 + 44100372 44100412 41 GCAGCCGACGACACAGAGATCTCCTTTGACCCCGAGAACCT GCAGCCGACGACACAGAGATCTCCTTTGACCCTGAGAACCT < 41bp 1 0.543316338428649 1 0.592525780200958 experiment 0.913367323142702 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DBNL ENSG00000136279 CDS Human protein_coding chr7:44100392 chr7:44100404 synonymous SNV . 0 33 hm5C_associated_SNPs_43491 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44100354-44100414
64251 chr17 78704415 78704415 1 + G A UCEC 78704396 + 78704376 78704416 41 TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGC TCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAAC < 41bp 1 0.464800867394147 1 0.165069103240967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPTOR ENSG00000141564 CDS Human protein_coding chr17:78704396 chr17:78704415 nonsynonymous SNV 0.943 4 40 hm5C_associated_SNPs_43492 0 0 1 DDX24 POSTAR2 ENCODE chr17:78704376-78704444
64251 chr12 82752426 82752426 1 + A G UCEC 82752435 + 82752415 82752455 41 TGCAGTTCCTGAGGGATGCCCTGTCCATTTCCAATGCACAT TGCAGTTCCTGGGGGATGCCCTGTCCATTTCCAATGCACAT < 41bp 1 0.286095770889818 1 0.123768657445908 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752435 chr12:82752426 nonsynonymous SNV 0.030 1 12 hm5C_associated_SNPs_43493 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:82752398-82752436
64251 chr3 51624525 51624525 1 + A T UCEC 51624531 + 51624511 51624551 41 GGAGGAGGAGGAGGAGGTGGCAGTGGAGGAGTGTGACAGGG GGAGGAGGAGGAGGTGGTGGCAGTGGAGGAGTGTGACAGGG < 41bp 1 0.673402864319379 1 0.747793436050415 experiment 0.653194271361242 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624531 chr3:51624525 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_43494 0 0 6 BUD13 POSTAR2 ENCODE chr3:51624516-51624578
64251 chr5 53815360 53815360 1 + G T UCEC 53815367 + 53815347 53815387 41 TAGCGCTGTATCAGGGGCATCTGGCTAACTTCCCGGACATC TAGCGCTGTATCATGGGCATCTGGCTAACTTCCCGGACATC < 41bp 1 0.328000873402531 1 0.185053616762161 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815367 chr5:53815360 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_43496 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:53815340-53815360
64251 chr3 132394156 132394156 1 + C T UCEC 132394139 + 132394119 132394159 41 TTTTTACCTTGGATACAATGCAATGCAGGATTTTTTTCCTA TTTTTACCTTGGATACAATGCAATGCAGGATTTTTTTTCTA < 41bp 1 0.302233413658994 1 0.0702444911003113 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBA5 ENSG00000081307 CDS Human protein_coding chr3:132394139 chr3:132394156 nonsynonymous SNV 0.997 4 38 hm5C_associated_SNPs_43497 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:132394135-132394161
64251 chr3 191074910 191074910 1 + C T UCEC 191074906 + 191074886 191074926 41 ATTTTGCTGTCCTGGAGGACCACACCCTGGCTCACAGCCTG ATTTTGCTGTCCTGGAGGACCACATCCTGGCTCACAGCCTG < 41bp 1 0.544312043828636 1 0.217493265867233 experiment 0.911375912342727 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191074906 chr3:191074910 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_43498 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:191074889-191074914
64251 chr1 183083817 183083817 1 + C A UCEC 183083799 + 183083779 183083819 41 TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAACAA TGTGAGAGGTGCCGAGAGAACTTCTTCCGCCTTGGCAAAAA < 41bp 1 0.366418832019112 1 0.183221280574799 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183083799 chr1:183083817 nonsynonymous SNV 0.879 0 39 hm5C_associated_SNPs_43499 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:183083810-183083848
64251 chr17 38318322 38318322 1 + A C UCEC 38318303 + 38318283 38318323 41 TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGAT TGGGTAAAAAGGGCCCTAAGCATTTGGATGATGATGAAGCT < 41bp 1 0.123615591587093 1 0.176970422267914 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318303 chr17:38318322 nonsynonymous SNV 0.997 4 40 hm5C_associated_SNPs_43502 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr16 630878 630878 1 + C T UCEC 630864 + 630844 630884 41 CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAG CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCTGTGCAG < 41bp 1 0.268281032599417 1 0.435722827911377 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:630864 chr16:630878 synonymous SNV . 0 35 hm5C_associated_SNPs_43503 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:630869-630899
64251 chr6 87865453 87865453 1 + C T UCEC 87865437 + 87865417 87865457 41 GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACCGACT GCGGGAGAGCCGGGTACCGGCCGTGGAAGCGGCCACTGACT < 41bp 1 0.421926107750014 1 0.308135598897934 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZNF292 ENSG00000188994 CDS Human protein_coding chr6:87865437 chr6:87865453 stopgain 0.861 0 37 hm5C_associated_SNPs_43504 0 0 6 DDX24 POSTAR2 ENCODE chr6:87865373-87865482
64251 chr17 80529627 80529627 1 + G A UCEC 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CGCCTTACTCCTACACGCAGCTGATAGTTCAGGCGATTACG < 41bp 1 0.0844609746053686 1 0.0495160222053528 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529627 nonsynonymous SNV 0.894 4 15 hm5C_associated_SNPs_43505 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:80529603-80529627
64251 chr19 17316780 17316780 1 + C T UCEC 17316775 + 17316755 17316795 41 CCCCGGCACTGCAGGGCGAGCCAGGCGTTGAGCCTGGCCAC CCCCGGCACTGCAGGGCGAGCCAGGTGTTGAGCCTGGCCAC < 41bp 1 0.285306011935405 1 0.464304864406586 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17316775 chr19:17316780 synonymous SNV . 0 26 hm5C_associated_SNPs_43507 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:17316780-17316800
64251 chr16 72130157 72130157 1 + G A UCEC 72130162 + 72130142 72130182 41 CCAAAAGTGCGGCCAGCGAGCAGCATGTCTTCAAGGCTCCT CCAAAAGTGCGGCCAACGAGCAGCATGTCTTCAAGGCTCCT < 41bp 1 0.754942139274061 1 0.739213347434998 experiment 0.490115721451879 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72130162 chr16:72130157 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_43508 0 0 2 GRWD1 POSTAR2 ENCODE chr16:72130130-72130171
64251 chr6 32944234 32944234 1 + T C UCEC 32944227 + 32944207 32944247 41 TTACTGCAGCTCCTCCAGCCCAGCCCCTTGCCAAGGTATGA TTACTGCAGCTCCTCCAGCCCAGCCCCCTGCCAAGGTATGA < 41bp 1 0.31217805626898 1 0.0967797338962555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BRD2 ENSG00000204256 CDS Human protein_coding chr6:32944227 chr6:32944234 nonsynonymous SNV 0.999 2 28 hm5C_associated_SNPs_43509 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:32944169-32944241
64251 chr10 101515437 101515437 1 + G T UCEC 101515429 + 101515409 101515449 41 ACTTTCTTGCTCAGAATATTCCCTAAAGGTAACAGATGTGA ACTTTCTTGCTCAGAATATTCCCTAAAGTTAACAGATGTGA < 41bp 1 0.400543321185126 1 0.151019334793091 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CUTC ENSG00000119929 CDS Human protein_coding chr10:101515429 chr10:101515437 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_43510 0 0 15 FUS POSTAR2 DRA001158,DRS012384 chr10:101515395-101515443
64251 chr10 102798430 102798430 1 + G A UCEC 102798423 + 102798403 102798443 41 CGCCCCTGGCTGGGGGCACCCCTGCAGGTGGGACTGGTGGG CGCCCCTGGCTGGGGGCACCCCTGCAGATGGGACTGGTGGG < 41bp 1 0.181633417860062 1 0.643294930458069 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SFXN3 ENSG00000107819 CDS Human protein_coding chr10:102798423 chr10:102798430 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_43511 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:102798406-102798438
64251 chr16 69279711 69279711 1 + G T UCEC 69279708 + 69279688 69279728 41 GAAACCTAAGCATGCCGGATCTGGAAAACAGGTGAGGTGTA GAAACCTAAGCATGCCGGATCTGTAAAACAGGTGAGGTGTA < 41bp 1 0.340472916733255 1 0.639710545539856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNTB2 ENSG00000168807 CDS Human protein_coding chr16:69279708 chr16:69279711 stopgain 1.000 1 24 hm5C_associated_SNPs_43513 0 0 1 GRWD1 POSTAR2 ENCODE chr16:69279659-69279750
64251 chr8 104066185 104066185 1 + G A UCEC 104066182 + 104066162 104066202 41 TTGTTCTTGATTCAGAGTATCTCGTCACATTACTGGTAGTA TTGTTCTTGATTCAGAGTATCTCATCACATTACTGGTAGTA < 41bp 1 0.210633997331179 1 0.0445477962493896 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104066182 chr8:104066185 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_43514 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104066173-104066198
64251 chr9 91041432 91041432 1 + G A UCEC 91041433 + 91041413 91041453 41 ACCCTAGTCCAGCAGCTCCGCTGCTCACTTAAATACAGATG ACCCTAGTCCAGCAGCTCCACTGCTCACTTAAATACAGATG < 41bp 1 0.465499377763166 1 0.32180392742157 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 UTR5 Human protein_coding chr9:91041433 chr9:91041432 . . 0 20 hm5C_associated_SNPs_43515 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr9:91041405-91041453
64251 chr6 31936155 31936155 1 + G A UCEC 31936137 + 31936117 31936157 41 CCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCGTC CCTTGCAGCCGTGACCACTGCTGTCCAGGAACTGCTGCATC < 41bp 1 0.252611249716041 1 0.128022223711014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31936137 chr6:31936155 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_43516 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:31936154-31936155
64251 chr4 106861771 106861771 1 + G T UCEC 106861769 + 106861749 106861789 41 GCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT GCAAATGTAAAGAAGGATACCATGGTGATGGACTGACTTGT < 41bp 1 0.462985812327996 1 0.323194235563278 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPNT ENSG00000168743 CDS Human protein_coding chr4:106861769 chr4:106861771 nonsynonymous SNV 0.882 2 23 hm5C_associated_SNPs_43517 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:106861744-106861771
64251 chr5 176519765 176519765 1 + C A UCEC 176519758 + 176519738 176519778 41 ATTCCATCGGCCTCTCCTACCAGTCTGCCTGGCTCACGGTG ATTCCATCGGCCTCTCCTACCAGTCTGACTGGCTCACGGTG < 41bp 1 0.300559221952072 1 0.426281869411469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FGFR4 ENSG00000160867 CDS Human protein_coding chr5:176519758 chr5:176519765 nonsynonymous SNV 0.975 4 28 hm5C_associated_SNPs_43518 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:176519747-176519775
64251 chr17 73814820 73814820 1 + G A UCEC 73814827 + 73814807 73814847 41 CCTAGCCCAGTGGGCACCAGCAGCGTCCCCGGCATGAATGC CCTAGCCCAGTGGACACCAGCAGCGTCCCCGGCATGAATGC < 41bp 1 0.665554905056656 1 0.472931206226349 experiment 0.668890189886689 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control UNK ENSG00000132478 CDS Human protein_coding chr17:73814827 chr17:73814820 nonsynonymous SNV 0.998 2 14 hm5C_associated_SNPs_43520 0 0 1 UCHL5 POSTAR2 ENCODE chr17:73814730-73814825
64251 chr11 58379208 58379208 1 + G T UCEC 58379202 + 58379182 58379222 41 AATTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCA AATTAGAGAGGATGAGGAACCTCCAATGAAGTGAGTAGGCA < 41bp 1 0.791828291226534 1 0.889111042022705 experiment 0.416343417546932 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379202 chr11:58379208 nonsynonymous SNV 0.998 1 27 hm5C_associated_SNPs_43527 0 0 22 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:58379185-58379208
64251 chr11 58379208 58379208 1 + G T UCEC 58379204 + 58379184 58379224 41 TTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAAT TTAGAGAGGATGAGGAACCTCCAATGAAGTGAGTAGGCAAT < 41bp 1 0.125105631046765 1 0.250145226716995 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379204 chr11:58379208 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_43528 0 0 22 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:58379185-58379208
64251 chr11 58379208 58379208 1 + G T UCEC 58379205 + 58379185 58379225 41 TAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAATT TAGAGAGGATGAGGAACCTCCAATGAAGTGAGTAGGCAATT < 41bp 1 0.221269211921366 1 0.108939409255981 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379205 chr11:58379208 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_43529 0 0 22 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:58379185-58379208
64251 chr12 112940012 112940012 1 + G A UCEC 112940029 + 112940009 112940049 41 GTGGAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA GTGAAGATCAGAGCCCTCTCCCGCCTTGTACTCCAACGCCA < 41bp 1 0.325557920314804 1 0.127474308013916 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112940029 chr12:112940012 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_43530 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:112939989-112940025
64251 chr22 41924513 41924513 1 + G A UCEC 41924519 + 41924499 41924539 41 TCAAGCACCCCAACGGGACCCAGGAGACCATCCTCCTGAAC TCAAGCACCCCAACAGGACCCAGGAGACCATCCTCCTGAAC < 41bp 1 0.799185778386907 1 0.697865843772888 experiment 0.401628443226185 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924519 chr22:41924513 nonsynonymous SNV 0.992 4 15 hm5C_associated_SNPs_43531 0 0 4 IGF2BP2 POSTAR2 ENCODE chr22:41924482-41924528
64251 chr18 13095639 13095639 1 + C T UCEC 13095653 + 13095633 13095673 41 CGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT CGTGGATTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCT < 41bp 1 0.170361069142159 1 0.0963205695152283 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095653 chr18:13095639 nonsynonymous SNV 0.003 1 7 hm5C_associated_SNPs_43532 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr18 13095639 13095639 1 + C T UCEC 13095655 + 13095635 13095675 41 TGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC TGGATTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC < 41bp 1 0.579630832732494 1 0.149724245071411 experiment 0.840738334535013 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13095655 chr18:13095639 nonsynonymous SNV 0.003 1 5 hm5C_associated_SNPs_43533 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr18:13095620-13095650
64251 chr12 123461501 123461501 1 + G A UCEC 123461515 + 123461495 123461535 41 CCAGCGGCTGGAGACAGTATCGGGTGAGGTCCTGGCCCTGA CCAGCGACTGGAGACAGTATCGGGTGAGGTCCTGGCCCTGA < 41bp 1 0.783675742495551 1 0.9425328373909 experiment 0.432648515008897 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123461515 chr12:123461501 synonymous SNV . 0 7 hm5C_associated_SNPs_43534 0 0 8 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:123461478-123461504
64251 chr2 27449450 27449450 1 + G A UCEC 27449451 + 27449431 27449471 41 CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTT CTCTGCCCTGGCCAGTAAGACCACAGGTTATCCACTGGCTT < 41bp 1 0.192570528100393 1 0.0935760736465454 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27449451 chr2:27449450 nonsynonymous SNV 1.000 5 20 hm5C_associated_SNPs_43535 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:27449440-27449460
64251 chr1 161130777 161130777 1 + G A UCEC 161130757 + 161130737 161130777 41 CCATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAG CCATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAA < 41bp 1 0.0914863849566761 1 0.112721085548401 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130757 chr1:161130777 nonsynonymous SNV 1.000 1 41 hm5C_associated_SNPs_43536 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:161130755-161130787
64251 chr1 161130777 161130777 1 + G A UCEC 161130758 + 161130738 161130778 41 CATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGT CATCTCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAAT < 41bp 1 0.0295169428093078 1 0.0496025383472443 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130758 chr1:161130777 nonsynonymous SNV 1.000 1 40 hm5C_associated_SNPs_43537 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:161130755-161130787
64251 chr1 161130777 161130777 1 + G A UCEC 161130762 + 161130742 161130782 41 TCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAGTGGGG TCGGACCAACTTAGCCCGTTCCAAGTCTGTGAGCAATGGGG < 41bp 1 0.110533051535282 1 0.202012062072754 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161130762 chr1:161130777 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_43538 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:161130755-161130787
64251 chr20 3564713 3564713 1 + C T UCEC 3564722 + 3564702 3564742 41 GGAATGGTATACGATGAGCACCTGCCCCCGTAAGTGAAAAA GGAATGGTATATGATGAGCACCTGCCCCCGTAAGTGAAAAA < 41bp 1 0.0266951390413254 1 0.135832250118256 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3564722 chr20:3564713 nonsynonymous SNV 0.973 4 12 hm5C_associated_SNPs_43539 0 0 4 BUD13 POSTAR2 ENCODE chr20:3564679-3564727
64251 chr11 62502875 62502875 1 + C A UCEC 62502861 + 62502841 62502881 41 TTTGGCCCATTAGCTTGTCTCCTTCAGATGGAGCCCGTGAA TTTGGCCCATTAGCTTGTCTCCTTCAGATGGAGCACGTGAA < 41bp 1 0.0268915050280996 1 0.0603937208652496 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC9C ENSG00000162222 CDS Human protein_coding chr11:62502861 chr11:62502875 nonsynonymous SNV 0.996 0 35 hm5C_associated_SNPs_43545 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:62502860-62502880
64251 chr21 45217977 45217977 1 + C T UCEC 45217964 + 45217944 45217984 41 CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCCGCAGGTG CGCGCTGTCCCAGAAGAGGTCTGAGAAGCCGCCTGCAGGTG < 41bp 1 0.692935104611386 1 0.173383921384811 experiment 0.614129790777229 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217964 chr21:45217977 synonymous SNV . 0 34 hm5C_associated_SNPs_43546 0 0 2 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr19 11152175 11152175 1 + C T UCEC 11152165 + 11152145 11152185 41 CGGCCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCT CGGCCGCCTGCCGAGAAACTCTCCCCTAACTCACCCAACCT < 41bp 1 0.32539512070843 1 0.326309084892273 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152165 chr19:11152175 nonsynonymous SNV 0.928 3 31 hm5C_associated_SNPs_43547 0 0 11 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:11152150-11152197
64251 chr19 11152175 11152175 1 + C T UCEC 11152168 + 11152148 11152188 41 CCGCCTGCCGAGAAACTCTCCCCTAACCCACCCAACCTCAC CCGCCTGCCGAGAAACTCTCCCCTAACTCACCCAACCTCAC < 41bp 1 0.157498626101967 1 0.142834037542343 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152168 chr19:11152175 nonsynonymous SNV 0.928 3 28 hm5C_associated_SNPs_43548 0 0 11 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:11152150-11152197
64251 chr8 145139390 145139390 1 + G A UCEC 145139396 + 145139376 145139416 41 CTCATGGTTCTGCGGCAGGCCTCCGGCCGCCCCCACGGCTC CTCATGGTTCTGCGACAGGCCTCCGGCCGCCCCCACGGCTC < 41bp 1 0.773439976865011 1 0.662142515182495 experiment 0.453120046269979 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139396 chr8:145139390 synonymous SNV . 0 15 hm5C_associated_SNPs_43549 0 0 2 DDX24 POSTAR2 ENCODE chr8:145139384-145139394
64251 chr19 14580190 14580190 1 + A G UCEC 14580202 + 14580182 14580222 41 CAGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTC CAGTGACCGGTGCGGGACACCCCTTCCTGGTGAACCTCTTC < 41bp 1 0.0638307844329068 1 0.109463095664978 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580202 chr19:14580190 nonsynonymous SNV 0.117 0 9 hm5C_associated_SNPs_43550 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14580172-14580190
64251 chr19 14580190 14580190 1 + A G UCEC 14580203 + 14580183 14580223 41 AGTGACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG AGTGACCGGTGCGGGACACCCCTTCCTGGTGAACCTCTTCG < 41bp 1 0.0238416377249172 1 0.15375617146492 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580203 chr19:14580190 nonsynonymous SNV 0.117 0 8 hm5C_associated_SNPs_43551 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14580172-14580190
64251 chr19 14580190 14580190 1 + A G UCEC 14580207 + 14580187 14580227 41 ACCAGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG ACCGGTGCGGGACACCCCTTCCTGGTGAACCTCTTCGGCTG < 41bp 1 0.473543095213138 1 0.613941669464111 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580207 chr19:14580190 nonsynonymous SNV 0.117 0 4 hm5C_associated_SNPs_43552 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14580172-14580190
64251 chr10 93751971 93751971 1 + A G UCEC 93751990 + 93751970 93752010 41 CACAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTC CGCAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTC < 41bp 1 0.182450115833101 1 0.0966578125953674 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751990 chr10:93751971 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_43553 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:93751971-93751972
64251 chr10 93751971 93751971 1 + A G UCEC 93751991 + 93751971 93752011 41 ACAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTCA GCAAGTAGGCGAGGTCCTACCCCCAAAGCAGTAAAAGCTCA < 41bp 1 0.733967283561842 1 0.734308838844299 experiment 0.532065432876315 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93751991 chr10:93751971 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_43554 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:93751971-93751972
64251 chr2 86360531 86360531 1 + G A UCEC 86360529 + 86360509 86360549 41 AAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCCTAAA AAGCATTGGATGTGGCCAATCGACTAGAAGTGATTCCTAAA < 41bp 1 0.430285864450765 1 0.666226863861084 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360529 chr2:86360531 synonymous SNV . 0 23 hm5C_associated_SNPs_43555 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr2:86360511-86360536
64251 chr7 794299 794299 1 + C T UCEC 794297 + 794277 794317 41 AGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTG AGATCCTCCCTGCCCTGTGCCATGACATCACCGACTGGGTG < 41bp 1 0.436712221727731 1 0.0710168182849884 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:794297 chr7:794299 synonymous SNV . 0 23 hm5C_associated_SNPs_43556 0 0 2 FXR2 POSTAR2 ENCODE chr7:794226-794300
64251 chr1 109806263 109806263 1 + G A UCEC 109806280 + 109806260 109806300 41 GCAGCAGCCTGGTGGCCTGGCATGGCCTCTCGCTGCCCATC GCAACAGCCTGGTGGCCTGGCATGGCCTCTCGCTGCCCATC < 41bp 1 0.266013247812733 1 0.169173687696457 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806280 chr1:109806263 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_43558 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:109806234-109806271
64251 chr11 35684851 35684851 1 + C A UCEC 35684862 + 35684842 35684882 41 CCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGG CCACGGCTCACAGGCCTGGACCCCGCCAGCTGACGGAGAGG < 41bp 1 0.371964285554392 1 0.190104812383652 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684862 chr11:35684851 synonymous SNV . 0 10 hm5C_associated_SNPs_43559 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:35684850-35684851
64251 chr11 35684851 35684851 1 + C A UCEC 35684863 + 35684843 35684883 41 CACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGG CACGGCTCACAGGCCTGGACCCCGCCAGCTGACGGAGAGGG < 41bp 1 0.21034434894475 1 0.22091281414032 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684863 chr11:35684851 synonymous SNV . 0 9 hm5C_associated_SNPs_43560 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:35684850-35684851
64251 chr11 35684851 35684851 1 + C A UCEC 35684864 + 35684844 35684884 41 ACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG ACGGCTCACAGGCCTGGACCCCGCCAGCTGACGGAGAGGGG < 41bp 1 0.274684120182869 1 0.346649050712585 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684864 chr11:35684851 synonymous SNV . 0 8 hm5C_associated_SNPs_43561 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:35684850-35684851
64251 chr5 112868681 112868681 1 + G A UCEC 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTGTGGCTGAAAGAGTTACCGCAGAGAGACGGGAAAGGA < 41bp 1 0.579148968645285 1 0.102562010288239 experiment 0.841702062709431 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868681 nonsynonymous SNV 0.999 4 20 hm5C_associated_SNPs_43562 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr5 112868681 112868681 1 + G A UCEC 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTGTGGCTGAAAGAGTTACCGCAGAGAGACGGGAAAGGAT < 41bp 1 0.686558621186589 1 0.764957785606384 experiment 0.626882757626822 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868681 nonsynonymous SNV 0.999 4 19 hm5C_associated_SNPs_43563 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:112868660-112868694
64251 chr21 33032090 33032090 1 + C T UCEC 33032103 + 33032083 33032123 41 ATGGCGACGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCC ATGGCGATGAAGGCCGTGTGCGTGCTGAAGGGCGACGGCCC < 41bp 1 0.742323105758216 1 0.199099600315094 experiment 0.515353788483569 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOD1 ENSG00000142168 CDS Human protein_coding chr21:33032103 chr21:33032090 nonsynonymous SNV 0.696 1 8 hm5C_associated_SNPs_43565 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:33031980-33032091
64251 chr18 33780019 33780019 1 + C T UCEC 33780021 + 33780001 33780041 41 GTCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAA GTCAAGTCTGGGCGGTTGTACCCTGTGAGCACGCCTGGGAA < 41bp 1 0.40942685890586 1 0.0617339313030243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780021 chr18:33780019 nonsynonymous SNV 0.000 1 19 hm5C_associated_SNPs_43568 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780019 33780019 1 + C T UCEC 33780022 + 33780002 33780042 41 TCAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAG TCAAGTCTGGGCGGTTGTACCCTGTGAGCACGCCTGGGAAG < 41bp 1 0.535803819103687 1 0.300858616828918 experiment 0.928392361792625 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780022 chr18:33780019 nonsynonymous SNV 0.000 1 18 hm5C_associated_SNPs_43569 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 33780019 33780019 1 + C T UCEC 33780023 + 33780003 33780043 41 CAAGTCTGGGCGGTTGCACCCTGTGAGCACGCCTGGGAAGT CAAGTCTGGGCGGTTGTACCCTGTGAGCACGCCTGGGAAGT < 41bp 1 0.656125906684829 1 0.0503070950508118 experiment 0.687748186630343 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780023 chr18:33780019 nonsynonymous SNV 0.000 1 17 hm5C_associated_SNPs_43570 0 0 1 FXR2 POSTAR2 ENCODE chr18:33779993-33780083
64251 chr18 13059290 13059290 1 + T C UCEC 13059272 + 13059252 13059292 41 GCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGC GCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATCGC < 41bp 1 0.57445833422408 1 0.32967472076416 experiment 0.851083331551841 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13059272 chr18:13059290 synonymous SNV . 0 39 hm5C_associated_SNPs_43571 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13059275-13059299
64251 chr2 32640606 32640606 1 + G A UCEC 32640607 + 32640587 32640627 41 TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGAATCC TTCATTTGTTGGTAGGACTACGGACATGCCCTGTTGAATCC < 41bp 1 0.12714984607745 1 0.500162482261658 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640607 chr2:32640606 synonymous SNV . 0 20 hm5C_associated_SNPs_43572 0 0 20 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:32640584-32640606
64251 chr10 91465098 91465098 1 + T G UCEC 91465083 + 91465063 91465103 41 TTTTAATCAAGAGGGAGTACCTCGACCATCTTATGTTTTTA TTTTAATCAAGAGGGAGTACCTCGACCATCTTATGGTTTTA < 41bp 1 0.777472893959163 1 0.713513374328613 experiment 0.445054212081675 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91465083 chr10:91465098 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_43573 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:91465078-91465098
64251 chr9 80915557 80915557 1 + G T UCEC 80915575 + 80915555 80915595 41 AAGGAGTTGGCATTAGTGTTCTTGGTAAGATTTACTTTTGA AATGAGTTGGCATTAGTGTTCTTGGTAAGATTTACTTTTGA < 41bp 1 0.457170976779826 1 0.481495320796967 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80915575 chr9:80915557 stopgain 0.991 1 3 hm5C_associated_SNPs_43575 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80915515-80915611
64251 chr1 161088974 161088974 1 + C A UCEC 161088961 + 161088941 161088981 41 TCTCCTCTTCCTCCTGCGAACTGCCCCTGGTGGCTGTGTGC TCTCCTCTTCCTCCTGCGAACTGCCCCTGGTGGATGTGTGC < 41bp 1 0.310500881953744 1 0.0882014334201813 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088961 chr1:161088974 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_43577 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161088960-161088980
64251 chr2 207024653 207024653 1 + T A UCEC 207024663 + 207024643 207024683 41 GCGCCCACAATTTGCGCGCTCTCTTTCTGCTGCTCCCCAGC GCGCCCACAAATTGCGCGCTCTCTTTCTGCTGCTCCCCAGC < 41bp 1 0.393951703376626 1 0.0214557647705078 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 UTR5 Human protein_coding chr2:207024663 chr2:207024653 . . 0 11 hm5C_associated_SNPs_43579 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:207024600-207024660
64251 chr6 44219831 44219831 1 + T G UCEC 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGGACT < 41bp 1 0.368283746877046 1 0.217917144298553 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219831 nonsynonymous SNV 0.997 3 38 hm5C_associated_SNPs_43580 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219831 44219831 1 + T G UCEC 44219833 + 44219813 44219853 41 ACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGA ACCGAGCCCATTGACGAGGACTGTGTGCAGCAGCTCAAGGA < 41bp 1 0.490591455860796 1 0.0422308444976807 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219833 chr6:44219831 nonsynonymous SNV 0.997 3 19 hm5C_associated_SNPs_43581 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219831 44219831 1 + T G UCEC 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACGAGGACTGTGTGCAGCAGCTCAAGGAATTTGAT < 41bp 1 0.72619444314767 1 0.266084134578705 experiment 0.547611113704659 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219831 nonsynonymous SNV 0.997 3 12 hm5C_associated_SNPs_43582 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219831 44219831 1 + T G UCEC 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACGAGGACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG < 41bp 1 0.764479397476816 1 0.475555062294006 experiment 0.471041205046367 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219831 nonsynonymous SNV 0.997 3 6 hm5C_associated_SNPs_43583 0 0 46 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr7 100867239 100867239 1 + A C UCEC 100867232 + 100867212 100867252 41 CTGCAGGTGTCTGAAGTGGACTGTGTGAGCCTGGGCATTCC CTGCAGGTGTCTGAAGTGGACTGTGTGCGCCTGGGCATTCC < 41bp 1 0.699743593156315 1 0.0630992949008942 experiment 0.600512813687371 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867232 chr7:100867239 stoploss 0.602 0 28 hm5C_associated_SNPs_43588 0 0 19 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr7 100867239 100867239 1 + A C UCEC 100867242 + 100867222 100867262 41 CTGAAGTGGACTGTGTGAGCCTGGGCATTCCCAGAGAGGAA CTGAAGTGGACTGTGTGCGCCTGGGCATTCCCAGAGAGGAA < 41bp 1 0.712374170144782 1 0.439249008893967 experiment 0.575251659710436 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867242 chr7:100867239 stoploss 0.602 0 18 hm5C_associated_SNPs_43589 0 0 19 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:100867220-100867240
64251 chr10 104679414 104679414 1 + G T UCEC 104679423 + 104679403 104679443 41 CTTCCTACCCGGTCAGCAAGCTGCTGGACTGCGTCCTGGGC CTTCCTACCCGTTCAGCAAGCTGCTGGACTGCGTCCTGGGC < 41bp 1 0.419586620994717 1 0.164173662662506 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679423 chr10:104679414 nonsynonymous SNV 1.000 5 12 hm5C_associated_SNPs_43590 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104679386-104679422
64251 chr20 44522629 44522629 1 + T C UCEC 44522643 + 44522623 44522663 41 ACAGGCTTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA ACAGGCCTTGGTCTTCTCTCCAGACCCACTGCTGCTCTCAA < 41bp 1 0.1598584421295 1 0.932987987995148 experiment 1 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control CTSA ENSG00000064601 CDS Human protein_coding chr20:44522643 chr20:44522629 nonsynonymous SNV 0.939 5 7 hm5C_associated_SNPs_43592 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:44522626-44522666
64251 chr11 309112 309112 1 + A G UCEC 309126 + 309106 309146 41 ATCTTCATGACCATTCTGCTCATCATCATCCCAGTGTTGGT ATCTTCGTGACCATTCTGCTCATCATCATCCCAGTGTTGGT < 41bp 1 0.419040884249255 1 0.0389183163642883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFITM2 ENSG00000185201 CDS Human protein_coding chr11:309126 chr11:309112 nonsynonymous SNV 0.000 1 7 hm5C_associated_SNPs_43594 0 0 5 LARP4 POSTAR2 ENCODE chr11:309105-309176
64251 chr7 5644995 5644995 1 + T G UCEC 5644976 + 5644956 5644996 41 GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACTA GGCGACACTCCTGTGGACTTCTTCTTCGAGTTCTGCGACGA < 41bp 1 0.236073767750329 1 0.234697699546814 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5644976 chr7:5644995 nonsynonymous SNV 0.999 1 40 hm5C_associated_SNPs_43596 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5644951-5645002
64251 chr18 74622083 74622083 1 + A G UCEC 74622068 + 74622048 74622088 41 CTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCT CTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGGGCCCT < 41bp 1 0.334839351333108 1 0.371924072504044 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74622068 chr18:74622083 nonsynonymous SNV 0.020 0 36 hm5C_associated_SNPs_43597 0 0 1 PPIG POSTAR2 ENCODE chr18:74622023-74622083
64251 chr14 21544577 21544577 1 + C T UCEC 21544565 + 21544545 21544585 41 CCGTCCTGCTGGACCTTCGTCAGGCACCTCCACTGCCTCCA CCGTCCTGCTGGACCTTCGTCAGGCACCTCCATTGCCTCCA < 41bp 1 0.668789777070558 1 0.887920558452606 experiment 0.662420445858883 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21544565 chr14:21544577 synonymous SNV . 0 33 hm5C_associated_SNPs_43598 0 0 1 PPIG POSTAR2 ENCODE chr14:21544551-21544607
64251 chr1 27099098 27099098 1 + C T UCEC 27099103 + 27099083 27099123 41 TCCACACCACACAGTCAGATCCCCCCATTGCCAGGCATGAG TCCACACCACACAGTTAGATCCCCCCATTGCCAGGCATGAG < 41bp 1 0.0449640483731189 1 0.0292576551437378 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27099103 chr1:27099098 stopgain 1.000 1 16 hm5C_associated_SNPs_43600 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:27099078-27099106
64251 chr19 21281646 21281646 1 + G A UCEC 21281651 + 21281631 21281671 41 CTCTAAGCAAGACCCGATCACCAGTCTAGAGCAAGAAAAAG CTCTAAGCAAGACCCAATCACCAGTCTAGAGCAAGAAAAAG < 41bp 1 0.204846157492583 1 0.167950391769409 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21281651 chr19:21281646 synonymous SNV . 0 16 hm5C_associated_SNPs_43601 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:21281629-21281654
64251 chr19 21281646 21281646 1 + G A UCEC 21281652 + 21281632 21281672 41 TCTAAGCAAGACCCGATCACCAGTCTAGAGCAAGAAAAAGA TCTAAGCAAGACCCAATCACCAGTCTAGAGCAAGAAAAAGA < 41bp 1 0.204307151777936 1 0.345235258340836 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21281652 chr19:21281646 synonymous SNV . 0 15 hm5C_associated_SNPs_43602 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:21281629-21281654
64251 chr19 42729223 42729223 1 + T C UCEC 42729206 + 42729186 42729226 41 GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGA GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCCAGA < 41bp 1 0.135839601784002 1 0.0651758015155792 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729206 chr19:42729223 nonsynonymous SNV 0.991 2 38 hm5C_associated_SNPs_43603 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:42729222-42729223
64251 chr1 201970597 201970597 1 + A G UCEC 201970604 + 201970584 201970624 41 GGTGATCAGGATCAGTTTGACAGTTTTCTCAAGGTATAGTC GGTGATCAGGATCGGTTTGACAGTTTTCTCAAGGTATAGTC < 41bp 1 0.50299840335427 1 0.0585473775863647 experiment 0.994003193291461 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201970604 chr1:201970597 nonsynonymous SNV 0.995 0 14 hm5C_associated_SNPs_43605 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:201970580-201970604
64251 chr14 71444260 71444260 1 + T C UCEC 71444269 + 71444249 71444289 41 AGCTATAAAAGTGAGCAGACCAGCTCAACTCACATAGAGAG AGCTATAAAAGCGAGCAGACCAGCTCAACTCACATAGAGAG < 41bp 1 0.204222779731395 1 0.670011699199677 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444269 chr14:71444260 synonymous SNV . 0 12 hm5C_associated_SNPs_43606 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:71444236-71444274
64251 chr14 72152239 72152239 1 + A G UCEC 72152244 + 72152224 72152264 41 CAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA CAGGTGCAGAGTCCCGTGACCTCGCGGCTGAATGCTGGAAA < 41bp 1 0.491887043442673 1 0.287386119365692 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152244 chr14:72152239 nonsynonymous SNV 0.992 1 16 hm5C_associated_SNPs_43607 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:72152238-72152239
64251 chr7 138944039 138944039 1 + T C UCEC 138944058 + 138944038 138944078 41 TTGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG TCGAGATGAAGAAGCGGAAGCGGAAAGAGGAAGGGGAAAAG < 41bp 1 0.527479017416246 1 0.556599676609039 experiment 0.945041965167507 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBN2 ENSG00000157741 CDS Human protein_coding chr7:138944058 chr7:138944039 synonymous SNV . 0 2 hm5C_associated_SNPs_43609 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:138944020-138944040
64251 chr17 49239204 49239204 1 + T C UCEC 49239220 + 49239200 49239240 41 TGAATGACAGGAGGGCAGACCACATTGCTTTTCACATCCAT TGAACGACAGGAGGGCAGACCACATTGCTTTTCACATCCAT < 41bp 1 0.351949939793601 1 0.267435252666473 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NME1 ENSG00000239672 CDS Human protein_coding chr17:49239220 chr17:49239204 stoploss 0.973 0 5 hm5C_associated_SNPs_43610 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49239091-49239236
64251 chr1 44433315 44433315 1 + C T UCEC 44433322 + 44433302 44433342 41 TCACACTGCTGTGCCGGGGTCTCCATGGCACAGATTACACA TCACACTGCTGTGTCGGGGTCTCCATGGCACAGATTACACA < 41bp 1 0.700006338336386 1 0.904475212097168 experiment 0.599987323327227 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control IPO13 ENSG00000117408 CDS Human protein_coding chr1:44433322 chr1:44433315 synonymous SNV . 0 14 hm5C_associated_SNPs_43611 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:44433306-44433333
64251 chr17 16344603 16344603 1 + T C UCEC 16344596 + 16344576 16344616 41 GCAGATTGTGTAGTGGTGAACCTATGGTTTTCTGAAGATAT GCAGATTGTGTAGTGGTGAACCTATGGCTTTCTGAAGATAT < 41bp 1 0.0550239272455479 1 0.0686910152435303 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNORD65 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16344596 chr17:16344603 . . 0 28 hm5C_associated_SNPs_43612 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:16344583-16344612
64251 chr2 118579628 118579628 1 + C T UCEC 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGATCAT < 41bp 1 0.500318193631927 1 0.115370273590088 experiment 0.999363612736145 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579628 synonymous SNV . 0 38 hm5C_associated_SNPs_43614 0 0 12 FASTKD2 POSTAR2 ENCODE chr2:118579565-118579634
64251 chr19 54606430 54606430 1 + G A UCEC 54606432 + 54606412 54606452 41 ACCCCTTCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGA ACCCCTTCAGGAGTCGGCACCTTCCTCAAGAATGCCTGGGA < 41bp 1 0.144783298860693 1 0.049350768327713 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54606432 chr19:54606430 nonsynonymous SNV 0.798 0 19 hm5C_associated_SNPs_43615 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:54606420-54606440
64251 chr1 223943295 223943295 1 + C T UCEC 223943279 + 223943259 223943299 41 TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCG TGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGATGGCG < 41bp 1 0.0622933732858686 1 0.0665687024593353 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943279 chr1:223943295 nonsynonymous SNV 1.000 5 37 hm5C_associated_SNPs_43616 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr1 223943295 223943295 1 + C T UCEC 223943292 + 223943272 223943312 41 TGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATG TGGGGCTCATTCAGAAGCACCGATGGCGGCAGAGGAAGATG < 41bp 1 0.415938616851884 1 0.194166362285614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943292 chr1:223943295 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_43617 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr1 223943295 223943295 1 + C T UCEC 223943301 + 223943281 223943321 41 TTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGAC TTCAGAAGCACCGATGGCGGCAGAGGAAGATGGGCGAGGAC < 41bp 1 0.716103735103107 1 0.599407315254211 experiment 0.567792529793786 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943301 chr1:223943295 nonsynonymous SNV 1.000 5 15 hm5C_associated_SNPs_43618 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr16 30081513 30081513 1 + G A UCEC 30081505 + 30081485 30081525 41 TGGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACG TGGGGCTGCTGCCAGCGAGTCCCTCTTCATCTCTAACCACG < 41bp 1 0.0574239816337996 1 0.0372637510299683 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081505 chr16:30081513 nonsynonymous SNV 0.984 1 29 hm5C_associated_SNPs_43619 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081513 30081513 1 + G A UCEC 30081506 + 30081486 30081526 41 GGGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGC GGGGCTGCTGCCAGCGAGTCCCTCTTCATCTCTAACCACGC < 41bp 1 0.0533177172806366 1 0.0573436319828033 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081506 chr16:30081513 nonsynonymous SNV 0.984 1 28 hm5C_associated_SNPs_43620 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081513 30081513 1 + G A UCEC 30081507 + 30081487 30081527 41 GGGCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCC GGGCTGCTGCCAGCGAGTCCCTCTTCATCTCTAACCACGCC < 41bp 1 0.188143259712083 1 0.137648612260818 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081507 chr16:30081513 nonsynonymous SNV 0.984 1 27 hm5C_associated_SNPs_43621 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr16 30081513 30081513 1 + G A UCEC 30081509 + 30081489 30081529 41 GCTGCTGCCAGCGAGTCCCTCTTCGTCTCTAACCACGCCTA GCTGCTGCCAGCGAGTCCCTCTTCATCTCTAACCACGCCTA < 41bp 1 0.600948395342813 1 0.800184488296509 experiment 0.798103209314374 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081509 chr16:30081513 nonsynonymous SNV 0.984 1 25 hm5C_associated_SNPs_43622 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30081445-30081561
64251 chr19 45762361 45762361 1 + G A UCEC 45762352 + 45762332 45762372 41 TCGCCTCCTGTCCCGAGGAGCAGCCCCACGTGGGCAACTAC TCGCCTCCTGTCCCGAGGAGCAGCCCCACATGGGCAACTAC < 41bp 1 0.200086171050914 1 0.6030313372612 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MARK4 ENSG00000007047 CDS Human protein_coding chr19:45762352 chr19:45762361 nonsynonymous SNV 0.991 3 30 hm5C_associated_SNPs_43623 0 0 1 DDX3X POSTAR2 ENCODE chr19:45762247-45762369
64251 chr11 44639775 44639775 1 + C T UCEC 44639783 + 44639763 44639803 41 CTCATGAATCGCCCTGAGGTCACCTACCCCTGTTCCTGCGA CTCATGAATCGCTCTGAGGTCACCTACCCCTGTTCCTGCGA < 41bp 1 0.378468853508745 1 0.117589205503464 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD82 ENSG00000085117 CDS Human protein_coding chr11:44639783 chr11:44639775 nonsynonymous SNV 0.001 0 13 hm5C_associated_SNPs_43624 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:44639768-44639799
64251 chr3 40499409 40499409 1 + G T UCEC 40499425 + 40499405 40499445 41 GGCCGGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA GGCCTGGTGGCCTATGTCTCCTTTGGACCTCATGCCGGAAA < 41bp 1 0.350756842213429 1 0.0524573922157288 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499425 chr3:40499409 nonsynonymous SNV 0.999 3 5 hm5C_associated_SNPs_43625 0 0 3 DDX3X POSTAR2 ENCODE chr3:40499379-40499409
64251 chr9 2186134 2186134 1 + G A UCEC 2186154 + 2186134 2186174 41 GAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG AAGTGCCCGGCAGAAAATTGCCAAAGAGGAAGAGAGTGAGG < 41bp 1 0.204685926841758 1 0.0793546736240387 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2186154 chr9:2186134 synonymous SNV . 0 1 hm5C_associated_SNPs_43627 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:2186132-2186159
64251 chr13 20221288 20221288 1 + G A UCEC 20221300 + 20221280 20221320 41 AGAAAACTGTGCCTAAAAAGCAGAGGAATCAAGACAGAAGC AGAAAACTATGCCTAAAAAGCAGAGGAATCAAGACAGAAGC < 41bp 1 0.698659547421484 1 0.810785293579102 experiment 0.602680905157032 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20221300 chr13:20221288 nonsynonymous SNV 0.001 0 9 hm5C_associated_SNPs_43628 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr13:20221268-20221289
64251 chr7 55240744 55240744 1 + G T UCEC 55240738 + 55240718 55240758 41 CCTCTTGCTGCTGGTGGTGGCCCTGGGGATCGGCCTCTTCA CCTCTTGCTGCTGGTGGTGGCCCTGGTGATCGGCCTCTTCA < 41bp 1 0.280832086317608 1 0.384992212057114 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55240738 chr7:55240744 nonsynonymous SNV 0.246 0 27 hm5C_associated_SNPs_43629 0 0 1 SND1 POSTAR2 ENCODE chr7:55240684-55240818
64251 chr19 57796003 57796003 1 + G A UCEC 57795986 + 57795966 57796006 41 GTGGGGGCAGTTGGACGTGACCCAGAGGGCCTTGTACGTGG GTGGGGGCAGTTGGACGTGACCCAGAGGGCCTTGTACATGG < 41bp 1 0.683635834615036 1 0.110977917909622 experiment 0.632728330769927 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57795986 chr19:57796003 nonsynonymous SNV 0.936 1 38 hm5C_associated_SNPs_43630 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57795951-57796036
64251 chr16 2946577 2946577 1 + G A UCEC 2946591 + 2946571 2946611 41 AAACTGGTCCTGCTCACAGCCTCCAAAGACAGCACCAAGGT AAACTGATCCTGCTCACAGCCTCCAAAGACAGCACCAAGGT < 41bp 1 0.761836749822291 1 0.873437523841858 experiment 0.476326500355418 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control FLYWCH2 ENSG00000162076 CDS Human protein_coding chr16:2946591 chr16:2946577 nonsynonymous SNV 0.999 0 7 hm5C_associated_SNPs_43631 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:2946567-2946588
64251 chr1 120286531 120286531 1 + G A UCEC 120286511 + 120286491 120286531 41 AGTTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTG AGTTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTA < 41bp 1 0.378419971094625 1 0.729426383972168 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286511 chr1:120286531 synonymous SNV . 0 41 hm5C_associated_SNPs_43632 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286513 + 120286493 120286533 41 TTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCG TTTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTACG < 41bp 1 0.173638529214594 1 0.251030623912811 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286513 chr1:120286531 synonymous SNV . 0 39 hm5C_associated_SNPs_43633 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286514 + 120286494 120286534 41 TTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGG TTCTTCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTACGG < 41bp 1 0.430939809660697 1 0.168971568346024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286514 chr1:120286531 synonymous SNV . 0 38 hm5C_associated_SNPs_43634 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286518 + 120286498 120286538 41 TCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTGCGGCTGC TCTATTTCCAGGCCTCCTGGCAGAGGCAGGCGTACGGCTGC < 41bp 1 0.676395304179332 1 0.913830876350403 experiment 0.647209391641336 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286518 chr1:120286531 synonymous SNV . 0 34 hm5C_associated_SNPs_43635 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286535 + 120286515 120286555 41 TGGCAGAGGCAGGCGTGCGGCTGCTGTCCTACCAGACTTCA TGGCAGAGGCAGGCGTACGGCTGCTGTCCTACCAGACTTCA < 41bp 1 0.631073402661745 1 0.514018714427948 experiment 0.73785319467651 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286535 chr1:120286531 synonymous SNV . 0 17 hm5C_associated_SNPs_43636 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286542 + 120286522 120286562 41 GGCAGGCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGT GGCAGGCGTACGGCTGCTGTCCTACCAGACTTCACTGGTGT < 41bp 1 0.0664526101727658 1 0.190434247255325 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286542 chr1:120286531 synonymous SNV . 0 10 hm5C_associated_SNPs_43637 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286543 + 120286523 120286563 41 GCAGGCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGTC GCAGGCGTACGGCTGCTGTCCTACCAGACTTCACTGGTGTC < 41bp 1 0.268831553520533 1 0.111624002456665 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286543 chr1:120286531 synonymous SNV . 0 9 hm5C_associated_SNPs_43638 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286547 + 120286527 120286567 41 GCGTGCGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGAT GCGTACGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGAT < 41bp 1 0.550598158967972 1 0.631887555122375 experiment 0.898803682064057 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286547 chr1:120286531 synonymous SNV . 0 5 hm5C_associated_SNPs_43639 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr1 120286531 120286531 1 + G A UCEC 120286551 + 120286531 120286571 41 GCGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGATGGGG ACGGCTGCTGTCCTACCAGACTTCACTGGTGTCAGATGGGG < 41bp 1 0.425666303077378 1 0.51078873872757 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120286551 chr1:120286531 synonymous SNV . 0 1 hm5C_associated_SNPs_43640 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:120286520-120286554
64251 chr17 65722731 65722731 1 + G A UCEC 65722746 + 65722726 65722766 41 ACGTCGCAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT ACGTCACAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT < 41bp 1 0.417474137489494 1 0.227540463209152 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722746 chr17:65722731 nonsynonymous SNV 0.463 2 6 hm5C_associated_SNPs_43641 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65722634-65722747
64251 chr9 131893878 131893878 1 + G T UCEC 131893872 + 131893852 131893892 41 GTGCCTGAGGTGGCTGTTTACCTAAAGGAGTCAGTGGGGAA GTGCCTGAGGTGGCTGTTTACCTAAATGAGTCAGTGGGGAA < 41bp 1 0.439955819451615 1 0.451251327991486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPA ENSG00000119383 CDS Human protein_coding chr9:131893872 chr9:131893878 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_43642 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:131893876-131893897
64251 chrX 70516429 70516429 1 + T G UCEC 70516419 + 70516399 70516439 41 TTGTTCTTTCTTCCAGATTTCCTCGTCCTGTGACTGTGGAG TTGTTCTTTCTTCCAGATTTCCTCGTCCTGGGACTGTGGAG < 41bp 1 0.116631000270126 1 0.0549381375312805 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516419 chrX:70516429 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_43644 0 0 46 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chrX 70516429 70516429 1 + T G UCEC 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCGTCCTGGGACTGTGGAGCCCATGGACCAGTTAGATGAT < 41bp 1 0.115997845938364 1 0.146133720874786 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516429 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_43645 0 0 46 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr19 40718824 40718824 1 + G T UCEC 40718840 + 40718820 40718860 41 AGAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAG AGAATGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAG < 41bp 1 0.0739726165210886 1 0.182797074317932 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718840 chr19:40718824 nonsynonymous SNV 0.810 4 5 hm5C_associated_SNPs_43646 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718824 40718824 1 + G T UCEC 40718841 + 40718821 40718861 41 GAAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGG GAATGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGG < 41bp 1 0.0738908346477943 1 0.0414059162139893 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718841 chr19:40718824 nonsynonymous SNV 0.810 4 4 hm5C_associated_SNPs_43647 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr19 40718824 40718824 1 + G T UCEC 40718842 + 40718822 40718862 41 AAGGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGGA AATGGACGAACGTGGGGGCCCAGCTCCACCCTGCAGAAGGA < 41bp 1 0.19564559802581 1 0.188491702079773 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718842 chr19:40718824 nonsynonymous SNV 0.810 4 3 hm5C_associated_SNPs_43648 0 0 2 PPIG POSTAR2 ENCODE chr19:40718752-40718879
64251 chr3 47447487 47447487 1 + G A UCEC 47447468 + 47447448 47447488 41 CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAGC CCTTCGCCTACCTACGGGAGCACTTCCCTCAAGCCTACAAC < 41bp 1 0.0733231057400211 1 0.0214638411998749 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47447468 chr3:47447487 nonsynonymous SNV 0.937 3 40 hm5C_associated_SNPs_43650 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:47447467-47447497
64251 chr19 37853743 37853743 1 + G T UCEC 37853759 + 37853739 37853779 41 CAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA CAGCTGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGA < 41bp 1 0.277917027449294 1 0.211930960416794 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853759 chr19:37853743 nonsynonymous SNV 0.872 2 5 hm5C_associated_SNPs_43651 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr12 113379475 113379475 1 + G T UCEC 113379481 + 113379461 113379501 41 GGACCAGAGGGCCCGCCGTGCAGAGATCCTCAGTGAGATGC GGACCAGAGGGCCCTCCGTGCAGAGATCCTCAGTGAGATGC < 41bp 1 0.629547458764369 1 0.309429168701172 experiment 0.740905082471261 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OAS3 ENSG00000111331 CDS Human protein_coding chr12:113379481 chr12:113379475 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_43653 0 0 1 BUD13 POSTAR2 ENCODE chr12:113379464-113379593
64251 chr9 95869975 95869975 1 + C A UCEC 95869992 + 95869972 95870012 41 CCGCCTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC CCGACTGGTGCAGGACACGCCTTTCCTGACAGGCCATGGGC < 41bp 1 0.0548829530513539 1 0.0647945404052734 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CARD19 ENSG00000165233 CDS Human protein_coding chr9:95869992 chr9:95869975 synonymous SNV . 0 4 hm5C_associated_SNPs_43654 0 0 2 DDX3X POSTAR2 ENCODE chr9:95869959-95869999
64251 chr6 64288837 64288837 1 + A G UCEC 64288830 + 64288810 64288850 41 CTTTTGATGATGGTGCACCACCATCCAACCAGATTGTTGAT CTTTTGATGATGGTGCACCACCATCCAGCCAGATTGTTGAT < 41bp 1 0.0513089219451537 1 0.0156221985816956 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTP4A1 ENSG00000112245 CDS Human protein_coding chr6:64288830 chr6:64288837 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_43660 0 0 7 UPF1 POSTAR2 GSE47976,GSM1163975 chr6:64288800-64288880
64251 chr6 64288837 64288837 1 + A G UCEC 64288831 + 64288811 64288851 41 TTTTGATGATGGTGCACCACCATCCAACCAGATTGTTGATG TTTTGATGATGGTGCACCACCATCCAGCCAGATTGTTGATG < 41bp 1 0.133822398116116 1 0.0610883235931396 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTP4A1 ENSG00000112245 CDS Human protein_coding chr6:64288831 chr6:64288837 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_43661 0 0 7 UPF1 POSTAR2 GSE47976,GSM1163975 chr6:64288800-64288880
64251 chr12 3149321 3149321 1 + C T UCEC 3149330 + 3149310 3149350 41 ACCGCATCCACCGGTCCCCGCTCTGTGAGTACATGATCAAC ACCGCATCCACTGGTCCCCGCTCTGTGAGTACATGATCAAC < 41bp 1 0.135215591067749 1 0.408866345882416 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3149330 chr12:3149321 nonsynonymous SNV 0.989 3 12 hm5C_associated_SNPs_43662 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:3149297-3149335
64251 chr19 40477114 40477114 1 + A G UCEC 40477096 + 40477076 40477116 41 CATCCCAGGCCACACAGAGGCCGGCTTGGTCACTATGGAGG CATCCCAGGCCACACAGAGGCCGGCTTGGTCACTATGGGGG < 41bp 1 0.556876773555952 1 0.462213456630707 experiment 0.886246452888095 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40477096 chr19:40477114 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_43663 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:40477080-40477120
64251 chr19 40477114 40477114 1 + A G UCEC 40477097 + 40477077 40477117 41 ATCCCAGGCCACACAGAGGCCGGCTTGGTCACTATGGAGGA ATCCCAGGCCACACAGAGGCCGGCTTGGTCACTATGGGGGA < 41bp 1 0.614067415320034 1 0.252048909664154 experiment 0.771865169359932 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40477097 chr19:40477114 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_43664 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:40477080-40477120
64251 chr1 154248142 154248142 1 + G A UCEC 154248129 + 154248109 154248149 41 CCTCCAGCCCTGGATGATGCCTTTTCCATCCTGGACTTATT CCTCCAGCCCTGGATGATGCCTTTTCCATCCTGAACTTATT < 41bp 1 0.076892347097522 1 0.0463041067123413 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HAX1 ENSG00000143575 CDS Human protein_coding chr1:154248129 chr1:154248142 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_43665 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154248091-154248179
64251 chr7 99751535 99751535 1 + G T UCEC 99751531 + 99751511 99751551 41 TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG TGCTGGTGACGGTGTCAGGACAGATGGTGTTTGTGGTGAAG < 41bp 1 0.475839030433979 1 0.347814917564392 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751531 chr7:99751535 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_43666 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:99751496-99751552
64251 chr8 61533342 61533342 1 + G A UCEC 61533362 + 61533342 61533382 41 GTCTAGCTGCCCAACGGGGCCTACTCACTTATTCTTTCACC ATCTAGCTGCCCAACGGGGCCTACTCACTTATTCTTTCACC < 41bp 1 0.45504624963771 1 0.0626246929168701 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB2A ENSG00000104388 CDS Human protein_coding chr8:61533362 chr8:61533342 nonsynonymous SNV 0.920 1 1 hm5C_associated_SNPs_43667 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:61533291-61533342
64251 chr6 44219833 44219833 1 + C T UCEC 44219814 + 44219794 44219834 41 CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACT CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTATT < 41bp 1 0.374475283720128 1 0.153904289007187 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219814 chr6:44219833 synonymous SNV . 0 40 hm5C_associated_SNPs_43670 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219833 44219833 1 + C T UCEC 44219827 + 44219807 44219847 41 TATATGACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCT TATATGACCGAGCCCATTGACGAGTATTGTGTGCAGCAGCT < 41bp 1 0.723400189795368 1 0.338290870189667 experiment 0.553199620409264 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219827 chr6:44219833 synonymous SNV . 0 27 hm5C_associated_SNPs_43671 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219833 44219833 1 + C T UCEC 44219840 + 44219820 44219860 41 CCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGAT CCATTGACGAGTATTGTGTGCAGCAGCTCAAGGAATTTGAT < 41bp 1 0.639698562583929 1 0.328569531440735 experiment 0.720602874832143 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219840 chr6:44219833 synonymous SNV . 0 14 hm5C_associated_SNPs_43672 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr6 44219833 44219833 1 + C T UCEC 44219846 + 44219826 44219866 41 ACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG ACGAGTATTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAG < 41bp 1 0.783827533776221 1 0.424503415822983 experiment 0.432344932447557 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44219846 chr6:44219833 synonymous SNV . 0 8 hm5C_associated_SNPs_43673 0 0 44 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44219740-44219956
64251 chr17 35346649 35346649 1 + G A UCEC 35346663 + 35346643 35346683 41 TCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCT TCTATCAAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCT < 41bp 1 0.643172320718985 1 0.0609728395938873 experiment 0.713655358562029 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AATF ENSG00000108270 CDS Human other chr17:35346663 chr17:35346649 nonsynonymous SNV 0.997 1 7 hm5C_associated_SNPs_43674 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:35346617-35346655
64251 chr1 116946553 116946553 1 + T C UCEC 116946536 + 116946516 116946556 41 TGGTTCTGTGCCTTCCCCTACTCTCTTCTCATCTTCGTATA TGGTTCTGTGCCTTCCCCTACTCTCTTCTCATCTTCGCATA < 41bp 1 0.151625601506318 1 0.0622618198394775 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116946536 chr1:116946553 nonsynonymous SNV 0.975 3 38 hm5C_associated_SNPs_43677 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:116946505-116946554
64251 chr11 47297571 47297571 1 + G A UCEC 47297563 + 47297543 47297583 41 CTATCGATTGCTGCGCTCCCCAGTACCCGTCTCTGGGCAGA CTATCGATTGCTGCGCTCCCCAGTACCCATCTCTGGGCAGA < 41bp 1 0.508057332337942 1 0.311990439891815 experiment 0.983885335324117 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47297563 chr11:47297571 nonsynonymous SNV 0.977 1 29 hm5C_associated_SNPs_43678 0 0 2 FMR1 POSTAR2 ENCODE chr11:47297552-47297602
64251 chr19 36219692 36219692 1 + C T UCEC 36219685 + 36219665 36219705 41 CTGTCCACAGCGGAGTCCTTCCCAATGCGGTGTTGCCCCCA CTGTCCACAGCGGAGTCCTTCCCAATGTGGTGTTGCCCCCA < 41bp 1 0.227229676571153 1 0.368371963500977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36219685 chr19:36219692 nonsynonymous SNV 0.996 4 28 hm5C_associated_SNPs_43680 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:36219680-36219700
64251 chr21 47983778 47983778 1 + C T UCEC 47983797 + 47983777 47983817 41 CCCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG CTCGGCGTGAAGGTCATCATCGCACACACCGAGACCAAAGG < 41bp 1 0.315049458703213 1 0.307493925094604 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47983797 chr21:47983778 nonsynonymous SNV 0.724 4 2 hm5C_associated_SNPs_43681 0 0 4 BUD13 POSTAR2 ENCODE chr21:47983769-47983809
64251 chr9 140110210 140110210 1 + C T UCEC 140110226 + 140110206 140110246 41 GTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA GTAGTCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGCCCA < 41bp 1 0.129832011715844 1 0.0632002055644989 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110226 chr9:140110210 nonsynonymous SNV 0.931 5 5 hm5C_associated_SNPs_43682 0 0 1 PPIG POSTAR2 ENCODE chr9:140110207-140110234
64251 chr1 214794197 214794197 1 + C T UCEC 214794185 + 214794165 214794205 41 TGGGGAACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAA TGGGGAACAAGAGGTGACTCCAAGTCGATCAATTTTGCAAA < 41bp 1 0.315136344664647 1 0.216362833976746 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794185 chr1:214794197 nonsynonymous SNV 0.006 0 33 hm5C_associated_SNPs_43683 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr1 214794197 214794197 1 + C T UCEC 214794190 + 214794170 214794210 41 AACAAGAGGTGACTCCAAGTCGATCAACTTTGCAAATAGGG AACAAGAGGTGACTCCAAGTCGATCAATTTTGCAAATAGGG < 41bp 1 0.0804237333365041 1 0.247078567743301 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214794190 chr1:214794197 nonsynonymous SNV 0.006 0 28 hm5C_associated_SNPs_43684 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr2 204081998 204081998 1 + G A UCEC 204082013 + 204081993 204082033 41 TTCTCGAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA TTCTCAAAAATTTTGGGGATCGAGCAAGCGGCTCAGCCAGA < 41bp 1 0.214091683087734 1 0.378469556570053 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control NBEAL1 ENSG00000144426 CDS Human protein_coding chr2:204082013 chr2:204081998 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_43689 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:204081997-204082035
64251 chr9 135919195 135919195 1 + C A UCEC 135919215 + 135919195 135919235 41 CTCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC ATCCGGCCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCC < 41bp 1 0.0504127556075652 1 0.0276399552822113 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919215 chr9:135919195 nonsynonymous SNV 0.717 0 1 hm5C_associated_SNPs_43690 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr2 29159805 29159805 1 + A T UCEC 29159809 + 29159789 29159829 41 TTACAAAGAGGTTACAAGGACATCCTAATAGGTAAGATTAA TTACAAAGAGGTTACATGGACATCCTAATAGGTAAGATTAA < 41bp 1 0.109685681164359 1 0.1131551861763 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR43 ENSG00000163811 CDS Human protein_coding chr2:29159809 chr2:29159805 nonsynonymous SNV 0.959 1 17 hm5C_associated_SNPs_43691 0 0 12 EWSR1 POSTAR2 SRX029344 chr2:29159787-29159818
64251 chr17 79663480 79663480 1 + G A UCEC 79663489 + 79663469 79663509 41 GGAGAAGCTTCGCCGGGCAGCCGAGGAGGCAGAGCGCCAGC GGAGAAGCTTCACCGGGCAGCCGAGGAGGCAGAGCGCCAGC < 41bp 1 0.588888522076325 1 0.74053555727005 experiment 0.82222295584735 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663489 chr17:79663480 nonsynonymous SNV 0.995 3 12 hm5C_associated_SNPs_43692 0 0 6 DDX24 POSTAR2 ENCODE chr17:79663407-79663529
64251 chr8 104432656 104432656 1 + C A UCEC 104432667 + 104432647 104432687 41 CCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGATGG CCAGAGAAGATGGCTACTGTCCTTTCTGGGGCGTGTGATGG < 41bp 1 0.0910427419804417 1 0.0318083763122559 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104432667 chr8:104432656 nonsynonymous SNV 0.994 3 10 hm5C_associated_SNPs_43693 0 0 5 FXR2 POSTAR2 ENCODE chr8:104432505-104432661
64251 chr16 675504 675504 1 + G A UCEC 675485 + 675465 675505 41 TGGTCCTTTGACGGCATCGACCGCTGGATCAAGGAGATCGA TGGTCCTTTGACGGCATCGACCGCTGGATCAAGGAGATCAA < 41bp 1 0.202222928159193 1 0.114881217479706 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C ENSG00000197562 CDS Human protein_coding chr16:675485 chr16:675504 nonsynonymous SNV 0.942 1 40 hm5C_associated_SNPs_43694 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:675487-675505
64251 chr14 102445743 102445743 1 + G A UCEC 102445731 + 102445711 102445751 41 CAGCTCCGGGTCCTTACACTCAGTGAAGACTCGCCCTACGA CAGCTCCGGGTCCTTACACTCAGTGAAGACTCACCCTACGA < 41bp 1 0.21383364348766 1 0.796578407287598 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102445731 chr14:102445743 synonymous SNV . 0 33 hm5C_associated_SNPs_43696 4 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102445724-102445761
64251 chr12 98941420 98941420 1 + G T UCEC 98941402 + 98941382 98941422 41 GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGAGGA GCAGGCCGGCCATTAGAACTCAGTGATTTCAGGATGGATGA < 41bp 1 0.734068476975753 1 0.333775401115417 experiment 0.531863046048493 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98941402 chr12:98941420 nonsynonymous SNV 0.872 0 39 hm5C_associated_SNPs_43697 0 0 27 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:98941372-98941431
64251 chr16 89645276 89645276 1 + G A UCEC 89645265 + 89645245 89645285 41 CTGGGTTACGGCCTCCACAGCCAGCCCAAAAGTGGCTTCTG CTGGGTTACGGCCTCCACAGCCAGCCCAAAAATGGCTTCTG < 41bp 1 0.0792298250754846 1 0.799322068691254 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89645265 chr16:89645276 synonymous SNV . 0 32 hm5C_associated_SNPs_43698 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89645274-89645297
64251 chr5 5457671 5457671 1 + T C UCEC 5457687 + 5457667 5457707 41 AGGTTTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA AGGTCTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA < 41bp 1 0.395250898726504 1 0.20800644159317 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5457687 chr5:5457671 synonymous SNV . 0 5 hm5C_associated_SNPs_43699 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:5457660-5457680
64251 chr22 32188025 32188025 1 + A G UCEC 32188034 + 32188014 32188054 41 CTTAGGAGAAGAACTGTAGTCATGAAGTGACAGTGGTCCTG CTTAGGAGAAGGACTGTAGTCATGAAGTGACAGTGGTCCTG < 41bp 1 0.65577080870555 1 0.255634337663651 experiment 0.6884583825889 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32188034 chr22:32188025 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_43702 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr22:32188015-32188036
64251 chr4 3205791 3205791 1 + G T UCEC 3205778 + 3205758 3205798 41 GTTACTTAGTCCCCAGATGTCTGGAGAAGAGGAGGATTCTG GTTACTTAGTCCCCAGATGTCTGGAGAAGAGGATGATTCTG < 41bp 1 0.68659840664348 1 0.91582179069519 experiment 0.626803186713041 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3205778 chr4:3205791 nonsynonymous SNV 0.572 0 34 hm5C_associated_SNPs_43703 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:3205760-3205810
64251 chr3 142741794 142741794 1 + C T UCEC 142741800 + 142741780 142741820 41 TATGATGGAACATACGCTTCCCCCACCTCCATCCGGACTGC TATGATGGAACATATGCTTCCCCCACCTCCATCCGGACTGC < 41bp 1 0.556946868226424 1 0.0591742694377899 experiment 0.886106263547152 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142741800 chr3:142741794 nonsynonymous SNV 0.994 3 15 hm5C_associated_SNPs_43704 0 0 16 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:142741760-142741800
64251 chr20 35862439 35862439 1 + C T UCEC 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTGGATCCGGATTGGTGTCAATGTCTC < 41bp 1 0.518615637742447 1 0.323157429695129 experiment 0.962768724515105 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862439 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_43705 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:35862416-35862439
64251 chr19 56172454 56172454 1 + G A UCEC 56172435 + 56172415 56172455 41 ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGG ATTCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACAG < 41bp 1 0.628243054582334 1 0.572168350219727 experiment 0.743513890835332 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172435 chr19:56172454 nonsynonymous SNV 0.984 0 40 hm5C_associated_SNPs_43706 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr19 56172454 56172454 1 + G A UCEC 56172437 + 56172417 56172457 41 TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTC TCCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACAGTC < 41bp 1 0.166328606095243 1 0.121466904878616 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172437 chr19:56172454 nonsynonymous SNV 0.984 0 38 hm5C_associated_SNPs_43707 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr19 56172454 56172454 1 + G A UCEC 56172438 + 56172418 56172458 41 CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACGGTCT CCAGCCACTGCTCTTCTCCCCACCATGACCCCTGACAGTCT < 41bp 1 0.680514245775211 1 0.531381905078888 experiment 0.638971508449578 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172438 chr19:56172454 nonsynonymous SNV 0.984 0 37 hm5C_associated_SNPs_43708 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr1 46739826 46739826 1 + C A UCEC 46739819 + 46739799 46739839 41 TCCCCCTTCAGGTACTTATACGTCCGCCTGGATGGCACGAT TCCCCCTTCAGGTACTTATACGTCCGCATGGATGGCACGAT < 41bp 1 0.153945517255107 1 0.0860338509082794 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739819 chr1:46739826 nonsynonymous SNV 0.962 4 28 hm5C_associated_SNPs_43709 0 0 7 FMR1 POSTAR2 ENCODE chr1:46739812-46739850
64251 chr19 8551095 8551095 1 + G A UCEC 8551091 + 8551071 8551111 41 AACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCT AACAGCCTCGAGCGCATGGGCCCTACCATGGGCCCGGCCCT < 41bp 1 0.497002658977355 1 0.0364145040512085 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551091 chr19:8551095 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_43711 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551095 8551095 1 + G A UCEC 8551092 + 8551072 8551112 41 ACAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTG ACAGCCTCGAGCGCATGGGCCCTACCATGGGCCCGGCCCTG < 41bp 1 0.0932104464907176 1 0.0414590835571289 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551092 chr19:8551095 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_43712 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551095 8551095 1 + G A UCEC 8551093 + 8551073 8551113 41 CAGCCTCGAGCGCATGGGCCCTGCCATGGGCCCGGCCCTGG CAGCCTCGAGCGCATGGGCCCTACCATGGGCCCGGCCCTGG < 41bp 1 0.551744726209052 1 0.038785994052887 experiment 0.896510547581895 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551093 chr19:8551095 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_43713 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551095 8551095 1 + G A UCEC 8551103 + 8551083 8551123 41 CGCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCAT CGCATGGGCCCTACCATGGGCCCGGCCCTGGGCGCTGGCAT < 41bp 1 0.527408954460802 1 0.0865453481674194 experiment 0.945182091078396 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551103 chr19:8551095 nonsynonymous SNV 0.995 1 13 hm5C_associated_SNPs_43714 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551095 8551095 1 + G A UCEC 8551104 + 8551084 8551124 41 GCATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATT GCATGGGCCCTACCATGGGCCCGGCCCTGGGCGCTGGCATT < 41bp 1 0.447903652890367 1 0.109416902065277 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551104 chr19:8551095 nonsynonymous SNV 0.995 1 12 hm5C_associated_SNPs_43715 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr19 8551095 8551095 1 + G A UCEC 8551105 + 8551085 8551125 41 CATGGGCCCTGCCATGGGCCCGGCCCTGGGCGCTGGCATTG CATGGGCCCTACCATGGGCCCGGCCCTGGGCGCTGGCATTG < 41bp 1 0.764117071087855 1 0.150270283222198 experiment 0.471765857824289 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551105 chr19:8551095 nonsynonymous SNV 0.995 1 11 hm5C_associated_SNPs_43716 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8551040-8551100
64251 chr7 44805114 44805114 1 + C T UCEC 44805096 + 44805076 44805116 41 CCCAGCGTGATGGAGATGATCGCCGCCCTGGGCCCCGGCGC CCCAGCGTGATGGAGATGATCGCCGCCCTGGGCCCCGGTGC < 41bp 1 0.795872255542581 1 0.378390997648239 experiment 0.408255488914838 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805096 chr7:44805114 synonymous SNV . 0 39 hm5C_associated_SNPs_43718 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:44805093-44805127
64251 chr2 152273370 152273370 1 + C T UCEC 152273359 + 152273339 152273379 41 TCATTAGAAATACTGTTTAACAAAGGAGAGACGCATTCTGC TCATTAGAAATACTGTTTAACAAAGGAGAGATGCATTCTGC < 41bp 1 0.321594130655302 1 0.714677691459656 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RIF1 ENSG00000080345 CDS Human protein_coding chr2:152273359 chr2:152273370 nonsynonymous SNV 0.861 0 32 hm5C_associated_SNPs_43719 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:152273332-152273400
64251 chr3 183898713 183898713 1 + G A UCEC 183898730 + 183898710 183898750 41 ATCGTCGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG ATCATCGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTG < 41bp 1 0.765871620773876 1 0.734839558601379 experiment 0.468256758452248 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898730 chr3:183898713 nonsynonymous SNV 0.996 3 4 hm5C_associated_SNPs_43720 0 0 29 TARDBP POSTAR2 DRA001158,DRS012386 chr3:183898670-183898760
64251 chr12 31244689 31244689 1 + G A UCEC 31244687 + 31244667 31244707 41 CTATCAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGG CTATCAGATGCTGCTGCATGCGACCACTCGGCAGGCCGCGG < 41bp 1 0.414623927991913 1 0.145087242126465 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244687 chr12:31244689 nonsynonymous SNV 0.206 1 23 hm5C_associated_SNPs_43721 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr12 31244689 31244689 1 + G A UCEC 31244691 + 31244671 31244711 41 CAGATGCTGCTGCATGCGGCCACTCGGCAGGCCGCGGGCAT CAGATGCTGCTGCATGCGACCACTCGGCAGGCCGCGGGCAT < 41bp 1 0.295690243568437 1 0.0660594999790192 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244691 chr12:31244689 nonsynonymous SNV 0.206 1 19 hm5C_associated_SNPs_43722 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr20 30157017 30157017 1 + A T UCEC 30157025 + 30157005 30157045 41 GAGAAGAAAGAGAAATGATGCAGCTGGTGCCCGAGCCTCTC GAGAAGAAAGAGTAATGATGCAGCTGGTGCCCGAGCCTCTC < 41bp 1 0.705767819130014 1 0.47791850566864 experiment 0.588464361739971 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HM13 ENSG00000101294 CDS Human protein_coding chr20:30157025 chr20:30157017 stopgain 0.733 0 13 hm5C_associated_SNPs_43723 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:30156912-30157035
64251 chr2 204103735 204103735 1 + G A UCEC 204103736 + 204103716 204103756 41 AATTGGGCCAGGCTGAGGCGCTGCTGCTGGAGCGGCCGATC AATTGGGCCAGGCTGAGGCACTGCTGCTGGAGCGGCCGATC < 41bp 1 0.598366479591063 1 0.354208886623383 experiment 0.803267040817875 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYP20A1 ENSG00000119004 UTR5 Human protein_coding chr2:204103736 chr2:204103735 . . 0 20 hm5C_associated_SNPs_43724 0 0 1 DDX3X POSTAR2 ENCODE chr2:204103717-204103800
64251 chr2 204103735 204103735 1 + G A UCEC 204103739 + 204103719 204103759 41 TGGGCCAGGCTGAGGCGCTGCTGCTGGAGCGGCCGATCCGA TGGGCCAGGCTGAGGCACTGCTGCTGGAGCGGCCGATCCGA < 41bp 1 0.622498104002464 1 0.258098840713501 experiment 0.755003791995072 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP20A1 ENSG00000119004 UTR5 Human protein_coding chr2:204103739 chr2:204103735 . . 0 17 hm5C_associated_SNPs_43725 0 0 1 DDX3X POSTAR2 ENCODE chr2:204103717-204103800
64251 chr15 64418415 64418415 1 + C T UCEC 64418395 + 64418375 64418415 41 AGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTC AGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTT < 41bp 1 0.0886578915287154 1 0.252354979515076 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418395 chr15:64418415 synonymous SNV . 0 41 hm5C_associated_SNPs_43726 0 0 4 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418415 64418415 1 + C T UCEC 64418396 + 64418376 64418416 41 GAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCA GAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTTA < 41bp 1 0.216041904667792 1 0.33225804567337 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418396 chr15:64418415 synonymous SNV . 0 40 hm5C_associated_SNPs_43727 0 0 4 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr15 64418415 64418415 1 + C T UCEC 64418398 + 64418378 64418418 41 ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATA ATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTTATA < 41bp 1 0.109249497048569 1 0.0939939618110657 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418398 chr15:64418415 synonymous SNV . 0 38 hm5C_associated_SNPs_43728 0 0 4 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr2 241514979 241514979 1 + C G UCEC 241514997 + 241514977 241515017 41 TCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC TCGTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC < 41bp 1 0.592442400108066 1 0.2728670835495 experiment 0.815115199783869 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514997 chr2:241514979 nonsynonymous SNV 0.999 4 3 hm5C_associated_SNPs_43729 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr7 135291561 135291561 1 + C G UCEC 135291549 + 135291529 135291569 41 TTCGTCATGAAACAAGAATCCACATCTTGAATCTTCTCATT TTCGTCATGAAACAAGAATCCACATCTTGAATGTTCTCATT < 41bp 1 0.212434232840001 1 0.0828733444213867 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP205 ENSG00000155561 CDS Human protein_coding chr7:135291549 chr7:135291561 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_43730 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:135291557-135291576
64251 chrX 105921450 105921450 1 + T A UCEC 105921458 + 105921438 105921478 41 AAAGTGGAAGTCTATTTGCACAAGATTTATAGTCCAGAGAA AAAGTGGAAGTCAATTTGCACAAGATTTATAGTCCAGAGAA < 41bp 1 0.670501823015098 1 0.297337353229523 experiment 0.658996353969804 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105921458 chrX:105921450 nonsynonymous SNV 0.872 2 13 hm5C_associated_SNPs_43731 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:105921430-105921455
64251 chr7 73922433 73922433 1 + G A UCEC 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGCGCTATGACGTCCCCACCAACGGCTGCGGACC < 41bp 1 0.50806881273061 1 0.219767212867737 experiment 0.983862374538779 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922433 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_43732 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:73922410-73922438
64251 chr15 40708534 40708534 1 + G A UCEC 40708548 + 40708528 40708568 41 ACACAGGTAGCCCTGGACGGCATTCAGTGTTTTGGTGAGTG ACACAGATAGCCCTGGACGGCATTCAGTGTTTTGGTGAGTG < 41bp 1 0.0476501229812523 1 0.0348435640335083 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IVD ENSG00000128928 CDS Human protein_coding chr15:40708548 chr15:40708534 nonsynonymous SNV 0.980 2 7 hm5C_associated_SNPs_43734 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40708509-40708541
64251 chr7 102944355 102944355 1 + G A UCEC 102944354 + 102944334 102944374 41 AAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAG AAGCAGAGATTGAACGTGAGCATGGAGTAATCCTTAGAGAG < 41bp 1 0.537695064561551 1 0.473426014184952 experiment 0.924609870876898 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PMPCB ENSG00000105819 CDS Human protein_coding chr7:102944354 chr7:102944355 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_43735 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:102944334-102944367
64251 chr3 49568981 49568981 1 + C T UCEC 49568966 + 49568946 49568986 41 CCCATCCAGGATCGTGCCAACCCCCACATCTCCAGCCATTG CCCATCCAGGATCGTGCCAACCCCCACATCTCCAGTCATTG < 41bp 1 0.120519302444657 1 0.0245395004749298 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568966 chr3:49568981 nonsynonymous SNV 0.998 2 36 hm5C_associated_SNPs_43736 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:49568961-49568985
64251 chr6 145103184 145103184 1 + A G UCEC 145103189 + 145103169 145103209 41 ATGATGGACTTGAGCAAATGCATAAGGACCTGGTCAACGTT ATGATGGACTTGAGCGAATGCATAAGGACCTGGTCAACGTT < 41bp 1 0.166390792472169 1 0.385030627250671 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UTRN ENSG00000152818 CDS Human protein_coding chr6:145103189 chr6:145103184 nonsynonymous SNV 0.994 0 16 hm5C_associated_SNPs_43737 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:145103133-145103205
64251 chr1 200817246 200817246 1 + G A UCEC 200817245 + 200817225 200817265 41 CTCCAAACCGAGGAATCACTCGTTCTATTAGTAATGAAGGA CTCCAAACCGAGGAATCACTCATTCTATTAGTAATGAAGGA < 41bp 1 0.0670831162982652 1 0.481988459825516 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200817245 chr1:200817246 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_43740 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:200817234-200817252
64251 chr5 159849879 159849879 1 + G A UCEC 159849863 + 159849843 159849883 41 GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAA GTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAACCAA < 41bp 1 0.133059351422654 1 0.208641350269318 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159849863 chr5:159849879 synonymous SNV . 0 37 hm5C_associated_SNPs_43741 0 0 4 FUS POSTAR2 SRX029328 chr5:159849847-159849879
64251 chr1 43900098 43900098 1 + G A UCEC 43900109 + 43900089 43900129 41 CTGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCGAGTT CTGAGTGTCACCACCTGCAGCAGCTCCTGGTGAGGCGAGTT < 41bp 1 0.0839352130533388 1 0.229417055845261 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43900109 chr1:43900098 nonsynonymous SNV 0.998 0 10 hm5C_associated_SNPs_43745 0 0 2 BUD13 POSTAR2 ENCODE chr1:43900047-43900177
64251 chr8 67341394 67341394 1 + C T UCEC 67341375 + 67341355 67341395 41 CGAGCCGGAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGCT CGAGCCGGAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGTT < 41bp 1 0.577555779781077 1 0.423372179269791 experiment 0.844888440437846 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341375 chr8:67341394 nonsynonymous SNV 0.966 2 40 hm5C_associated_SNPs_43747 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:67341380-67341420
64251 chr17 79418799 79418799 1 + C T UCEC 79418808 + 79418788 79418828 41 CACTGCCCCAGCGCAGCCGCCCACAGCCAACCCCTGCAGCG CACTGCCCCAGTGCAGCCGCCCACAGCCAACCCCTGCAGCG < 41bp 1 0.141348663575291 1 0.106047123670578 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BAHCC1 ENSG00000171282 CDS Human other chr17:79418808 chr17:79418799 nonsynonymous SNV 0.000 0 12 hm5C_associated_SNPs_43748 0 0 1 DDX6 POSTAR2 ENCODE chr17:79418774-79418834
64251 chr14 102482307 102482307 1 + C T UCEC 102482327 + 102482307 102482347 41 CGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTG TGCTGCCTGGGCTCGCTCTTCTCCATGCTGCACCAGGCCTG < 41bp 1 0.737230480940932 1 0.974042415618896 experiment 0.525539038118136 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102482327 chr14:102482307 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_43749 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:102482296-102482324
64251 chr16 72134483 72134483 1 + T C UCEC 72134463 + 72134443 72134483 41 GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGT GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGC < 41bp 1 0.104318185440074 1 0.0281984806060791 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134463 chr16:72134483 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_43750 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:72134464-72134484
64251 chr2 203421066 203421066 1 + G A UCEC 203421065 + 203421045 203421085 41 GTCTTGTGGACAGGAGGGAACGGCCACTAGAAGGTGGCCGA GTCTTGTGGACAGGAGGGAACAGCCACTAGAAGGTGGCCGA < 41bp 1 0.274915509204425 1 0.523216843605042 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203421065 chr2:203421066 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_43751 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:203421060-203421100
64251 chr20 34776326 34776326 1 + C A UCEC 34776322 + 34776302 34776342 41 TGTGCCAATGGCCTGCTCATCTACCGGGACCGGCTGAGAAT TGTGCCAATGGCCTGCTCATCTACAGGGACCGGCTGAGAAT < 41bp 1 0.775203351688493 1 0.547480285167694 experiment 0.449593296623013 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EPB41L1 ENSG00000088367 CDS Human protein_coding chr20:34776322 chr20:34776326 synonymous SNV . 0 25 hm5C_associated_SNPs_43752 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:34776313-34776337
64251 chr16 29912737 29912737 1 + C T UCEC 29912748 + 29912728 29912768 41 GTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTG GTGAGCCGGTGGCTTCGGGCCTACGCAAGGCGCTACTCCTG < 41bp 1 0.64084348478693 1 0.524823606014252 experiment 0.71831303042614 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASPHD1 ENSG00000174939 CDS Human protein_coding chr16:29912748 chr16:29912737 nonsynonymous SNV 0.942 2 10 hm5C_associated_SNPs_43753 0 0 3 GRSF1 POSTAR2 ENCODE chr16:29912608-29912745
64251 chr19 54965794 54965794 1 + T C UCEC 54965774 + 54965754 54965794 41 CACAGCACAGCCAGGCGGGGCCCGCCACGGGCCAGGCCTAT CACAGCACAGCCAGGCGGGGCCCGCCACGGGCCAGGCCTAC < 41bp 1 0.0840899099667587 1 0.4097980260849 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54965774 chr19:54965794 synonymous SNV . 0 41 hm5C_associated_SNPs_43754 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:54965794-54965826
64251 chr19 54965794 54965794 1 + T C UCEC 54965775 + 54965755 54965795 41 ACAGCACAGCCAGGCGGGGCCCGCCACGGGCCAGGCCTATG ACAGCACAGCCAGGCGGGGCCCGCCACGGGCCAGGCCTACG < 41bp 1 0.107834825633591 1 0.201607346534729 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LENG8 ENSG00000167615 CDS Human protein_coding chr19:54965775 chr19:54965794 synonymous SNV . 0 40 hm5C_associated_SNPs_43755 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:54965794-54965826
64251 chr19 45490675 45490675 1 + G A UCEC 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCAG < 41bp 1 0.696391079982861 1 0.784320950508118 experiment 0.607217840034277 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490675 synonymous SNV . 0 40 hm5C_associated_SNPs_43757 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45490645-45490675
64251 chr12 57597273 57597273 1 + C T UCEC 57597276 + 57597256 57597296 41 GACGCCGACTGCATGGACGGCAGCGACGAGGAGGCCTGCGG GACGCCGACTGCATGGATGGCAGCGACGAGGAGGCCTGCGG < 41bp 1 0.287824684299148 1 0.232824862003326 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57597276 chr12:57597273 synonymous SNV . 0 18 hm5C_associated_SNPs_43758 0 0 3 GRWD1 POSTAR2 ENCODE chr12:57597232-57597282
64251 chr2 190531727 190531727 1 + T C UCEC 190531711 + 190531691 190531731 41 ACATGAAGGAAGTAATTCAGCAGTTCATTGATGTCCTGAGT ACATGAAGGAAGTAATTCAGCAGTTCATTGATGTCCCGAGT < 41bp 1 0.439837885735539 1 0.322365462779999 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531711 chr2:190531727 nonsynonymous SNV 0.702 4 37 hm5C_associated_SNPs_43760 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190531441-190531835
64251 chr1 11897081 11897081 1 + G A UCEC 11897086 + 11897066 11897106 41 TCCTCACCCGGGCTGGCGAGCAGCGCAAACGGAGCCAGTCC TCCTCACCCGGGCTGACGAGCAGCGCAAACGGAGCCAGTCC < 41bp 1 0.698412885883068 1 0.893293023109436 experiment 0.603174228233864 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897086 chr1:11897081 nonsynonymous SNV 0.191 2 16 hm5C_associated_SNPs_43761 0 0 3 BUD13 POSTAR2 ENCODE chr1:11897026-11897100
64251 chr15 74325024 74325024 1 + G A UCEC 74325006 + 74324986 74325026 41 TACAGTCAGTGCCCGGGGCACACCCCGTGCCAGTGTACGCC TACAGTCAGTGCCCGGGGCACACCCCGTGCCAGTGTACACC < 41bp 1 0.293147147716074 1 0.0441511869430542 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PML ENSG00000140464 CDS Human protein_coding chr15:74325006 chr15:74325024 nonsynonymous SNV 0.018 2 39 hm5C_associated_SNPs_43763 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:74325020-74325051
64251 chr17 33310223 33310223 1 + C T UCEC 33310210 + 33310190 33310230 41 GTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCAC GTTCTATCATTCCAGGGAAGCCATCTAAGATCATGTGCCAC < 41bp 1 0.0407370128662367 1 0.176616847515106 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33310210 chr17:33310223 nonsynonymous SNV 0.995 1 34 hm5C_associated_SNPs_43764 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33310216-33310254
64251 chr6 30886618 30886618 1 + G A UCEC 30886601 + 30886581 30886621 41 AGTGTTTAAATGTTTATCTTCAGATGCAGAGGTTGTGGTAG AGTGTTTAAATGTTTATCTTCAGATGCAGAGGTTGTGATAG < 41bp 1 0.170712465068971 1 0.38204824924469 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VARS2 ENSG00000137411 CDS Human protein_coding chr6:30886601 chr6:30886618 nonsynonymous SNV 0.992 3 38 hm5C_associated_SNPs_43765 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:30886541-30886639
64251 chr12 112229176 112229176 1 + G A UCEC 112229156 + 112229136 112229176 41 CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTG CATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTA < 41bp 1 0.290927939266155 1 0.169102966785431 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229156 chr12:112229176 nonsynonymous SNV 0.619 1 41 hm5C_associated_SNPs_43766 0 0 7 BUD13 POSTAR2 ENCODE chr12:112229173-112229287
64251 chr12 112229176 112229176 1 + G A UCEC 112229157 + 112229137 112229177 41 ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTGC ATTGTGCCTGGATTTGGCCCCACGGCTGGGGCCGCCATTAC < 41bp 1 0.758845427574368 1 0.567109405994415 experiment 0.482309144851264 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229157 chr12:112229176 nonsynonymous SNV 0.619 1 40 hm5C_associated_SNPs_43767 0 0 7 BUD13 POSTAR2 ENCODE chr12:112229173-112229287
64251 chr12 112229176 112229176 1 + G A UCEC 112229168 + 112229148 112229188 41 ATTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGG ATTTGGCCCCACGGCTGGGGCCGCCATTACCTCCCATGAGG < 41bp 1 0.168718030752001 1 0.135394364595413 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229168 chr12:112229176 nonsynonymous SNV 0.619 1 29 hm5C_associated_SNPs_43768 0 0 7 BUD13 POSTAR2 ENCODE chr12:112229173-112229287
64251 chr12 112229176 112229176 1 + G A UCEC 112229169 + 112229149 112229189 41 TTTGGCCCCACGGCTGGGGCCGCCATTGCCTCCCATGAGGA TTTGGCCCCACGGCTGGGGCCGCCATTACCTCCCATGAGGA < 41bp 1 0.720008137916621 1 0.788209080696106 experiment 0.559983724166757 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control ALDH2 ENSG00000111275;ENSG00000257767 CDS Human other chr12:112229169 chr12:112229176 nonsynonymous SNV 0.619 1 28 hm5C_associated_SNPs_43769 0 0 7 BUD13 POSTAR2 ENCODE chr12:112229173-112229287
64251 chr4 79440607 79440607 1 + C A UCEC 79440588 + 79440568 79440608 41 GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCT GGCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTAT < 41bp 1 0.184580154072491 1 0.607966721057892 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440588 chr4:79440607 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_43772 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr4 79440607 79440607 1 + C A UCEC 79440589 + 79440569 79440609 41 GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTCTT GCCTCCTTGGAGCACCACACCGAGATGGAGTTTTCTTTATT < 41bp 1 0.396182656062802 1 0.449177175760269 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FRAS1 ENSG00000138759 CDS Human protein_coding chr4:79440589 chr4:79440607 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_43773 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:79440589-79440620
64251 chr7 94293228 94293228 1 + C T UCEC 94293216 + 94293196 94293236 41 GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTCGTGACAAG GATTTCTCAGTTGATCGTGTCCGTGTCTGCTTTGTGACAAG < 41bp 1 0.188592436209992 1 0.0424976646900177 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293216 chr7:94293228 synonymous SNV . 0 33 hm5C_associated_SNPs_43775 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94293155-94293231
64251 chrX 55029468 55029468 1 + G A UCEC 55029466 + 55029446 55029486 41 CCATGCGGACCCTGGGAGGCCTGAGCGGCTAGTCTTTAAGA CCATGCGGACCCTGGGAGGCCTAAGCGGCTAGTCTTTAAGA < 41bp 1 0.397271195959937 1 0.403611570596695 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55029466 chrX:55029468 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_43776 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:55029447-55029478
64251 chr10 75867086 75867086 1 + C T UCEC 75867081 + 75867061 75867101 41 ACCTCAGGAGCCTGACTTCCCGCCGCCTCCACCAGACCTTG ACCTCAGGAGCCTGACTTCCCGCCGTCTCCACCAGACCTTG < 41bp 1 0.743673419981136 1 0.187676936388016 experiment 0.512653160037727 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75867081 chr10:75867086 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_43778 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75867074-75867093
64251 chrX 70516832 70516832 1 + G A UCEC 70516812 + 70516792 70516832 41 CAGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCG CAGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCA < 41bp 1 0.577603995619818 1 0.315210461616516 experiment 0.844792008760364 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516812 chrX:70516832 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_43779 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516832 70516832 1 + G A UCEC 70516813 + 70516793 70516833 41 AGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCGT AGCAGCAGGACCAAGTGGACCGCAACATCAAGGAGGCTCAT < 41bp 1 0.727245655553707 1 0.332744926214218 experiment 0.545508688892586 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516813 chrX:70516832 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_43780 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chrX 70516832 70516832 1 + G A UCEC 70516829 + 70516809 70516849 41 GGACCGCAACATCAAGGAGGCTCGTGAGAAGCTGGAGATGG GGACCGCAACATCAAGGAGGCTCATGAGAAGCTGGAGATGG < 41bp 1 0.323564093680206 1 0.0420860052108765 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70516829 chrX:70516832 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_43781 0 0 37 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chr3 141163624 141163624 1 + T C UCEC 141163632 + 141163612 141163652 41 TGTTGCTGATCCTGGAGGATCACTGAGCAAAACCACAAATA TGTTGCTGATCCCGGAGGATCACTGAGCAAAACCACAAATA < 41bp 1 0.379267172827036 1 0.260655224323273 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141163632 chr3:141163624 synonymous SNV . 0 13 hm5C_associated_SNPs_43783 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141163620-141163641
64251 chr22 31658767 31658767 1 + C T UCEC 31658771 + 31658751 31658791 41 GGGGACACTGAGGAGACGTTCCCTAAGGTGCCACCTCCCAC GGGGACACTGAGGAGATGTTCCCTAAGGTGCCACCTCCCAC < 41bp 1 0.434752119128345 1 0.0240149199962616 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658771 chr22:31658767 nonsynonymous SNV 0.999 3 17 hm5C_associated_SNPs_43784 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831621 chr22:31658760-31658780
64251 chr22 41924494 41924494 1 + C T UCEC 41924486 + 41924466 41924506 41 CCACCTTCTCCTTGCAGCCCCTGAAGTGCATCATCAAGCAC CCACCTTCTCCTTGCAGCCCCTGAAGTGTATCATCAAGCAC < 41bp 1 0.595909283770769 1 0.264200687408447 experiment 0.808181432458463 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924486 chr22:41924494 synonymous SNV . 0 29 hm5C_associated_SNPs_43785 0 0 5 IGF2BP2 POSTAR2 ENCODE chr22:41924482-41924528
64251 chr5 131607090 131607090 1 + G A UCEC 131607104 + 131607084 131607124 41 GAGCCCGTGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG GAGCCCATGGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCG < 41bp 1 0.653671752348262 1 0.174668401479721 experiment 0.692656495303476 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607104 chr5:131607090 nonsynonymous SNV 0.000 0 7 hm5C_associated_SNPs_43786 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr12 21598309 21598309 1 + T A UCEC 21598304 + 21598284 21598324 41 TCTAAAATATTGGAAGAATTCGATGTTGAAGAACAATCAAG TCTAAAATATTGGAAGAATTCGATGATGAAGAACAATCAAG < 41bp 1 0.584247194279888 1 0.442263007164001 experiment 0.831505611440225 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PYROXD1 ENSG00000121350 CDS Human protein_coding chr12:21598304 chr12:21598309 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_43787 0 0 2 FUS POSTAR2 SRX029328 chr12:21598296-21598324
64251 chr1 120254696 120254696 1 + T C UCEC 120254699 + 120254679 120254719 41 AGTGACAGCCTGGACCCTTGCTGCCGGAAGATCTTGCAAGA AGTGACAGCCTGGACCCCTGCTGCCGGAAGATCTTGCAAGA < 41bp 1 0.581793036548424 1 0.441557437181473 experiment 0.836413926903152 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120254699 chr1:120254696 synonymous SNV . 0 18 hm5C_associated_SNPs_43788 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:120254592-120254707
64251 chr1 120254696 120254696 1 + T C UCEC 120254703 + 120254683 120254723 41 ACAGCCTGGACCCTTGCTGCCGGAAGATCTTGCAAGATGGA ACAGCCTGGACCCCTGCTGCCGGAAGATCTTGCAAGATGGA < 41bp 1 0.70123867503307 1 0.793286085128784 experiment 0.597522649933859 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120254703 chr1:120254696 synonymous SNV . 0 14 hm5C_associated_SNPs_43789 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:120254592-120254707
64251 chr6 13616707 13616707 1 + C A UCEC 13616704 + 13616684 13616724 41 CATTCCAAAAGAAAAGAAAACTCCTTCCAGACACTATTTTG CATTCCAAAAGAAAAGAAAACTCATTCCAGACACTATTTTG < 41bp 1 0.29429914954551 1 0.0850081741809845 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13616704 chr6:13616707 nonsynonymous SNV 0.479 4 24 hm5C_associated_SNPs_43790 0 0 4 AGGF1 POSTAR2 ENCODE chr6:13616698-13616758
64251 chr2 32656069 32656069 1 + G A UCEC 32656070 + 32656050 32656090 41 TAGAAGTTCAACAAGAACAGCAGCAAAGGAGGCATCCTCAA TAGAAGTTCAACAAGAACAACAGCAAAGGAGGCATCCTCAA < 41bp 1 0.326787805129269 1 0.163377016782761 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32656070 chr2:32656069 synonymous SNV . 0 20 hm5C_associated_SNPs_43797 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32655992-32656086
64251 chr3 112715755 112715755 1 + T G UCEC 112715739 + 112715719 112715759 41 TCTTTTCTACATGCTTATAGCTTGAAGAGAACATTTTTATT TCTTTTCTACATGCTTATAGCTTGAAGAGAACATTTGTATT < 41bp 1 0.50582826280899 1 0.195688456296921 experiment 0.988343474382021 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112715739 chr3:112715755 nonsynonymous SNV 1.000 3 37 hm5C_associated_SNPs_43799 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:112715753-112715777
64251 chrX 129185871 129185871 1 + A C UCEC 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG CTCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG < 41bp 1 0.710045206670496 1 0.899373114109039 experiment 0.579909586659008 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185871 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_43800 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129185858-129185878
64251 chr12 112915799 112915799 1 + A C UCEC 112915794 + 112915774 112915814 41 CTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAGAG CTCCCGAGTGATTGTCATGACAACGCAAGAAGTGGAGAGAG < 41bp 1 0.554404659090885 1 0.39040806889534 experiment 0.891190681818231 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915794 chr12:112915799 nonsynonymous SNV 0.994 3 26 hm5C_associated_SNPs_43801 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr8 17815279 17815279 1 + G A UCEC 17815261 + 17815241 17815281 41 AACAGAAACTTAGACAGTTACAAGATCTTGTTGCTATGGTA AACAGAAACTTAGACAGTTACAAGATCTTGTTGCTATGATA < 41bp 1 0.683750230079532 1 0.216116845607758 experiment 0.632499539840937 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17815261 chr8:17815279 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_43803 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17815249-17815282
64251 chr4 184192384 184192384 1 + C A UCEC 184192371 + 184192351 184192391 41 CTGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGAC CTGTATTTCAACCAAACCAGCCGTTAGTAGATTATATAGAC < 41bp 1 0.021332332795742 1 0.114134311676025 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184192371 chr4:184192384 nonsynonymous SNV 0.015 1 34 hm5C_associated_SNPs_43804 0 0 3 GRWD1 POSTAR2 ENCODE chr4:184192374-184192391
64251 chr16 29810040 29810040 1 + T G UCEC 29810025 + 29810005 29810045 41 TGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCATGTCTT TGCCGAGGGCCGGCCATGGGCCCTTTCTGTCACCAGGTCTT < 41bp 1 0.14531823603444 1 0.031805694103241 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810025 chr16:29810040 nonsynonymous SNV 0.998 3 36 hm5C_associated_SNPs_43805 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29810019-29810051
64251 chr22 51044063 51044063 1 + G A UCEC 51044075 + 51044055 51044095 41 AGGAGGACGACTTCTGGTTCCGTGGCTTCAACATGCGCACG AGGAGGACAACTTCTGGTTCCGTGGCTTCAACATGCGCACG < 41bp 1 0.310558302301581 1 0.467042535543442 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAPK8IP2 ENSG00000008735 CDS Human protein_coding chr22:51044075 chr22:51044063 nonsynonymous SNV 0.801 3 9 hm5C_associated_SNPs_43806 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr22:51044033-51044063
64251 chr19 10935776 10935776 1 + A G UCEC 10935765 + 10935745 10935785 41 GATGGGGCCCAGGAGAACACCTTCTCCATGGACCCCCAACT GATGGGGCCCAGGAGAACACCTTCTCCATGGGCCCCCAACT < 41bp 1 0.163673428107787 1 0.109748154878616 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10935765 chr19:10935776 nonsynonymous SNV 0.998 5 32 hm5C_associated_SNPs_43808 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:10935760-10935781
64251 chr1 45242430 45242430 1 + C A UCEC 45242439 + 45242419 45242459 41 GTGGGGAATTTCTCCTGGGGCTCAGAGTGTGAGTGAGGCCC GTGGGGAATTTATCCTGGGGCTCAGAGTGTGAGTGAGGCCC < 41bp 1 0.553324624007835 1 0.11680081486702 experiment 0.893350751984331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45242439 chr1:45242430 nonsynonymous SNV 0.972 2 12 hm5C_associated_SNPs_43809 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:45242344-45242447
64251 chr1 45242430 45242430 1 + C A UCEC 45242441 + 45242421 45242461 41 GGGGAATTTCTCCTGGGGCTCAGAGTGTGAGTGAGGCCCTT GGGGAATTTATCCTGGGGCTCAGAGTGTGAGTGAGGCCCTT < 41bp 1 0.778983076710816 1 0.689712166786194 experiment 0.442033846578367 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS8 ENSG00000142937 CDS Human protein_coding chr1:45242441 chr1:45242430 nonsynonymous SNV 0.972 2 10 hm5C_associated_SNPs_43810 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:45242344-45242447
64251 chr21 45544578 45544578 1 + C A UCEC 45544584 + 45544564 45544604 41 AAGAGGTTCGAGATCTCTTGCAACCTGTCTTTGGACGCCAT AAGAGGTTCGAGATATCTTGCAACCTGTCTTTGGACGCCAT < 41bp 1 0.257676847257756 1 0.177045077085495 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45544584 chr21:45544578 synonymous SNV . 0 15 hm5C_associated_SNPs_43811 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr21:45544560-45544602
64251 chrX 48682083 48682083 1 + G A UCEC 48682101 + 48682081 48682121 41 GGGGGCCTCAGAATCTCAGGCCCCAGGAGAGGAGAACCTAC GGAGGCCTCAGAATCTCAGGCCCCAGGAGAGGAGAACCTAC < 41bp 1 0.305105201543311 1 0.426578968763351 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48682101 chrX:48682083 nonsynonymous SNV 0.002 0 3 hm5C_associated_SNPs_43812 0 0 4 BUD13 POSTAR2 ENCODE chrX:48682078-48682095
64251 chr3 142739464 142739464 1 + G T UCEC 142739480 + 142739460 142739500 41 GAGAGACATAAAACAAAAGGCAGATTAAGTCGATTTGAACC GAGATACATAAAACAAAAGGCAGATTAAGTCGATTTGAACC < 41bp 1 0.229138341430702 1 0.569075524806976 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142739480 chr3:142739464 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_43813 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:142739433-142739468
64251 chr15 22969237 22969237 1 + C T UCEC 22969231 + 22969211 22969251 41 AGCCGGTACCTGACGCTGGACGGCTTCGACGCCATGTTCCG AGCCGGTACCTGACGCTGGACGGCTTTGACGCCATGTTCCG < 41bp 1 0.567338734110539 1 0.119818359613419 experiment 0.865322531778922 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969231 chr15:22969237 synonymous SNV . 0 27 hm5C_associated_SNPs_43815 0 0 2 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr16 90001497 90001497 1 + G A UCEC 90001517 + 90001497 90001537 41 GCACCCTCAAGCTGGCCACGCCCACCTACGGGGACCTCAAC ACACCCTCAAGCTGGCCACGCCCACCTACGGGGACCTCAAC < 41bp 1 0.0692133623786521 1 0.0723415315151215 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001517 chr16:90001497 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_43816 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:90001461-90001502
64251 chr11 20139740 20139740 1 + G A UCEC 20139725 + 20139705 20139745 41 GGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT GGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAACGACT < 41bp 1 0.0560574459251714 1 0.307279855012894 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control NAV2 ENSG00000166833 CDS Human protein_coding chr11:20139725 chr11:20139740 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_43817 0 0 2 LIN28B POSTAR2 ENCODE chr11:20139681-20139749
64251 chr5 65321800 65321800 1 + C T UCEC 65321797 + 65321777 65321817 41 ATAATTACTTACAGCAGTTGCCCCCAGAGGTAATGTATTTT ATAATTACTTACAGCAGTTGCCCTCAGAGGTAATGTATTTT < 41bp 1 0.0191206582105095 1 0.0668041706085205 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65321797 chr5:65321800 nonsynonymous SNV 0.973 1 24 hm5C_associated_SNPs_43818 0 0 5 BUD13 POSTAR2 ENCODE chr5:65321783-65321803
64251 chr3 136667137 136667137 1 + A G UCEC 136667129 + 136667109 136667149 41 TTTCTCAGTATCACTAAAAGCACAAGGGAAAAACAAGCATT TTTCTCAGTATCACTAAAAGCACAAGGGGAAAACAAGCATT < 41bp 1 0.778499633485689 1 0.281068563461304 experiment 0.443000733028622 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCK1 ENSG00000158092 CDS Human protein_coding chr3:136667129 chr3:136667137 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_43819 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr3:136667116-136667152
64251 chr1 94964188 94964188 1 + G T UCEC 94964179 + 94964159 94964199 41 TTCGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC TTCGATCTGGGGCTAATGTTCTAATTTGTTGTCCAAATGGC < 41bp 1 0.508146545234327 1 0.172998905181885 experiment 0.983706909531346 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94964179 chr1:94964188 nonsynonymous SNV 1.000 5 30 hm5C_associated_SNPs_43820 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:94964180-94964202
64251 chr1 24998048 24998048 1 + G A UCEC 24998049 + 24998029 24998069 41 AGCTGCCACAACCACATTAGCACAGGAAGAGCCAGTGGCAG AGCTGCCACAACCACATTAACACAGGAAGAGCCAGTGGCAG < 41bp 1 0.726484709193878 1 0.142286360263824 experiment 0.547030581612243 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24998049 chr1:24998048 nonsynonymous SNV 0.722 0 20 hm5C_associated_SNPs_43822 0 0 1 TRA2A POSTAR2 ENCODE chr1:24998038-24998078
64251 chr15 73468829 73468829 1 + A T UCEC 73468840 + 73468820 73468860 41 GACTGGAAAACCAACTCCAACTGTGAAGTGGGTCAAAAATG GACTGGAAATCCAACTCCAACTGTGAAGTGGGTCAAAAATG < 41bp 1 0.145786756119813 1 0.366112053394318 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient NEO1 ENSG00000067141 CDS Human protein_coding chr15:73468840 chr15:73468829 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_43823 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr15:73468778-73468896
64251 chr20 5154257 5154257 1 + A T UCEC 5154273 + 5154253 5154293 41 GCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAA GCAGTTGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAA < 41bp 1 0.172832865332577 1 0.0521049797534943 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDS2 ENSG00000101290 CDS Human protein_coding chr20:5154273 chr20:5154257 nonsynonymous SNV 0.929 3 5 hm5C_associated_SNPs_43824 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr20:5154217-5154273
64251 chr3 49568286 49568286 1 + C G UCEC 49568306 + 49568286 49568326 41 CCACACCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG GCACACCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG < 41bp 1 0.231152400485926 1 0.310950815677643 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568306 chr3:49568286 nonsynonymous SNV 0.109 4 1 hm5C_associated_SNPs_43826 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:49568256-49568311
64251 chr9 100418042 100418042 1 + G C UCEC 100418035 + 100418015 100418055 41 AACTTCCAGTTCCGTTGGAGCTGGGAAGATTGGTAAGTGAT AACTTCCAGTTCCGTTGGAGCTGGGAACATTGGTAAGTGAT < 41bp 1 0.53982402396287 1 0.707043468952179 experiment 0.920351952074261 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100418035 chr9:100418042 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_43827 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:100418013-100418042
64251 chr19 35504587 35504587 1 + G C UCEC 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAC < 41bp 1 0.775178844136305 1 0.144361793994904 experiment 0.44964231172739 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504587 nonsynonymous SNV 0.999 2 41 hm5C_associated_SNPs_43828 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr10 75758107 75758107 1 + C G UCEC 75758099 + 75758079 75758119 41 TGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCA TGACCTCACCGCGCCCGTGGCCGCCGTGGAGGCGGCCGTCA < 41bp 1 0.311315165903427 1 0.297870934009552 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758099 chr10:75758107 nonsynonymous SNV 1.000 1 29 hm5C_associated_SNPs_43829 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758100 + 75758080 75758120 41 GACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAG GACCTCACCGCGCCCGTGGCCGCCGTGGAGGCGGCCGTCAG < 41bp 1 0.767591409343433 1 0.765760362148285 experiment 0.464817181313134 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758100 chr10:75758107 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_43830 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758102 + 75758082 75758122 41 CCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCA CCTCACCGCGCCCGTGGCCGCCGTGGAGGCGGCCGTCAGCA < 41bp 1 0.408114145143734 1 0.488912791013718 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758102 chr10:75758107 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_43831 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758103 + 75758083 75758123 41 CTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAA CTCACCGCGCCCGTGGCCGCCGTGGAGGCGGCCGTCAGCAA < 41bp 1 0.589775784385795 1 0.680960416793823 experiment 0.820448431228411 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758103 chr10:75758107 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_43832 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758111 + 75758091 75758131 41 GCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCC GCCCGTGGCCGCCGTGGAGGCGGCCGTCAGCAACCTCGTCC < 41bp 1 0.770975681323527 1 0.520806491374969 experiment 0.458048637352946 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758111 chr10:75758107 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_43833 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758114 + 75758094 75758134 41 CGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGG CGTGGCCGCCGTGGAGGCGGCCGTCAGCAACCTCGTCCGGG < 41bp 1 0.110631433633045 1 0.0477902293205261 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758114 chr10:75758107 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_43834 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr10 75758107 75758107 1 + C G UCEC 75758115 + 75758095 75758135 41 GTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGT GTGGCCGCCGTGGAGGCGGCCGTCAGCAACCTCGTCCGGGT < 41bp 1 0.592218730389703 1 0.204643100500107 experiment 0.815562539220594 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control VCL ENSG00000035403 CDS Human protein_coding chr10:75758115 chr10:75758107 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_43835 0 0 10 DDX3X POSTAR2 ENCODE chr10:75758098-75758158
64251 chr19 13054584 13054584 1 + G A UCEC 13054566 + 13054546 13054586 41 AGGACAAACAGGACGAGGAGCAGAGGCTTAAGGAGGAGGAA AGGACAAACAGGACGAGGAGCAGAGGCTTAAGGAGGAGAAA < 41bp 1 0.601767457370909 1 0.532667219638824 experiment 0.796465085258182 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054566 chr19:13054584 nonsynonymous SNV 0.827 1 39 hm5C_associated_SNPs_43836 0 0 35 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr19 13054584 13054584 1 + G A UCEC 13054572 + 13054552 13054592 41 AACAGGACGAGGAGCAGAGGCTTAAGGAGGAGGAAGAAGAC AACAGGACGAGGAGCAGAGGCTTAAGGAGGAGAAAGAAGAC < 41bp 1 0.575603473395481 1 0.468949824571609 experiment 0.848793053209038 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054572 chr19:13054584 nonsynonymous SNV 0.827 1 33 hm5C_associated_SNPs_43837 0 0 35 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr19 13054584 13054584 1 + G A UCEC 13054601 + 13054581 13054621 41 GAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGA GAGAAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGA < 41bp 1 0.539213906443825 1 0.584295630455017 experiment 0.921572187112351 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054601 chr19:13054584 nonsynonymous SNV 0.827 1 4 hm5C_associated_SNPs_43838 0 0 35 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr11 48164492 48164492 1 + C T UCEC 48164480 + 48164460 48164500 41 TTTTGTTTTAGATCCCCCTCCTCCAGATGGATCCCCTAATA TTTTGTTTTAGATCCCCCTCCTCCAGATGGATTCCCTAATA < 41bp 1 0.455682279875627 1 0.900282323360443 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48164480 chr11:48164492 nonsynonymous SNV 0.999 1 33 hm5C_associated_SNPs_43840 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:48164489-48164513
64251 chr6 31602091 31602091 1 + G C UCEC 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGACA < 41bp 1 0.167857561278639 1 0.0419564545154572 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602091 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_43841 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602091 31602091 1 + G C UCEC 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGACAT < 41bp 1 0.32246472698891 1 0.0596903264522552 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602091 nonsynonymous SNV 0.998 1 39 hm5C_associated_SNPs_43842 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602091 31602091 1 + G C UCEC 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGACATA < 41bp 1 0.382129509146943 1 0.155278325080872 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602091 nonsynonymous SNV 0.998 1 38 hm5C_associated_SNPs_43843 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602091 31602091 1 + G C UCEC 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGACATACA < 41bp 1 0.448426737927866 1 0.733695030212402 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602091 nonsynonymous SNV 0.998 1 36 hm5C_associated_SNPs_43844 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr6 31602091 31602091 1 + G C UCEC 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGACATACAGGCA < 41bp 1 0.411391557511243 1 0.750946998596191 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602091 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_43845 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr1 214795537 214795537 1 + G T UCEC 214795520 + 214795500 214795540 41 TTCAAGAACTCCAACTCCAACTGGAGAAAGCAAAAGTGGAA TTCAAGAACTCCAACTCCAACTGGAGAAAGCAAAAGTTGAA < 41bp 1 0.613359130277909 1 0.69642448425293 experiment 0.773281739444183 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214795520 chr1:214795537 synonymous SNV . 0 38 hm5C_associated_SNPs_43846 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:214795516-214795539
64251 chr1 201966463 201966463 1 + A G UCEC 201966479 + 201966459 201966499 41 CTTCATGCCACCGTCCTTTCCATTTGGAGGAATGGAGAACC CTTCGTGCCACCGTCCTTTCCATTTGGAGGAATGGAGAACC < 41bp 1 0.175058875127 1 0.205118089914322 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966479 chr1:201966463 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_43849 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:201966449-201966484
64251 chr11 988605 988605 1 + G A UCEC 988594 + 988574 988614 41 GGCAGCGGGCCGTGGACCTCCTCTACGCCATGTGCGACCGC GGCAGCGGGCCGTGGACCTCCTCTACGCCATATGCGACCGC < 41bp 1 0.715795395540478 1 0.531301140785217 experiment 0.568409208919044 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:988594 chr11:988605 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_43852 0 0 7 BUD13 POSTAR2 ENCODE chr11:988551-988606
64251 chr17 7214406 7214406 1 + A G UCEC 7214415 + 7214395 7214435 41 CAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGAC CAACTCATAATGTGGATGTCCCCAACATCAAAAGGAATGAC < 41bp 1 0.288100455013201 1 0.0652668178081512 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214415 chr17:7214406 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_43853 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr17 7214406 7214406 1 + A G UCEC 7214416 + 7214396 7214436 41 AACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACT AACTCATAATGTGGATGTCCCCAACATCAAAAGGAATGACT < 41bp 1 0.0544777274607973 1 0.0951005518436432 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214416 chr17:7214406 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_43854 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr14 104618473 104618473 1 + G A UCEC 104618487 + 104618467 104618507 41 TCACACGGGAGGCCATGCACCTGCTGCAGGCCCCTGCCAGC TCACACAGGAGGCCATGCACCTGCTGCAGGCCCCTGCCAGC < 41bp 1 0.461142614106486 1 0.516991436481476 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF26A ENSG00000066735 CDS Human protein_coding chr14:104618487 chr14:104618473 nonsynonymous SNV 0.470 0 7 hm5C_associated_SNPs_43855 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:104618448-104618482
64251 chr9 137021706 137021706 1 + G T UCEC 137021694 + 137021674 137021714 41 TTCAGACGAAAGAGATTGTACAGAAACTACAAGGCCACACA TTCAGACGAAAGAGATTGTACAGAAACTACAATGCCACACA < 41bp 1 0.676395416783829 1 0.511609494686127 experiment 0.647209166432342 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR5 ENSG00000196363 CDS Human protein_coding chr9:137021694 chr9:137021706 nonsynonymous SNV 0.974 1 33 hm5C_associated_SNPs_43856 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:137021646-137021708
64251 chr3 47046768 47046768 1 + G A UCEC 47046776 + 47046756 47046796 41 TACCTCATCCGCGTGGAGCCCTTCACCTCCCTGCACGTCCA TACCTCATCCGCATGGAGCCCTTCACCTCCCTGCACGTCCA < 41bp 1 0.191748972957394 1 0.131726503372192 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47046776 chr3:47046768 nonsynonymous SNV 0.921 0 13 hm5C_associated_SNPs_43857 0 0 5 BUD13 POSTAR2 ENCODE chr3:47046738-47046786
64251 chr7 98591326 98591326 1 + A G UCEC 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCATCGTCGATCGGATGGTCTGGTTCAGAGAA < 41bp 1 0.320765064232394 1 0.418165147304535 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591326 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_43858 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98591317-98591358
64251 chr13 113487178 113487178 1 + G A UCEC 113487177 + 113487157 113487197 41 GAACTGCTTTTTTATAGGAGCGCGAGGAGCTGTTTTTCCGG GAACTGCTTTTTTATAGGAGCACGAGGAGCTGTTTTTCCGG < 41bp 1 0.622262269986905 1 0.361166089773178 experiment 0.75547546002619 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487177 chr13:113487178 nonsynonymous SNV 0.037 1 22 hm5C_associated_SNPs_43859 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:113487173-113487205
64251 chr17 4797344 4797344 1 + G A UCEC 4797353 + 4797333 4797373 41 AGGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACC AGGAGATCACCAGGACCCAGCCCCCATACGGGGGCGGCACC < 41bp 1 0.0630273339877988 1 0.0883751213550568 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797353 chr17:4797344 nonsynonymous SNV 0.646 1 12 hm5C_associated_SNPs_43860 0 0 4 BUD13 POSTAR2 ENCODE chr17:4797291-4797344
64251 chr17 4797344 4797344 1 + G A UCEC 4797354 + 4797334 4797374 41 GGAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCA GGAGATCACCAGGACCCAGCCCCCATACGGGGGCGGCACCA < 41bp 1 0.487118154570888 1 0.852003931999207 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797354 chr17:4797344 nonsynonymous SNV 0.646 1 11 hm5C_associated_SNPs_43861 0 0 4 BUD13 POSTAR2 ENCODE chr17:4797291-4797344
64251 chr17 4797344 4797344 1 + G A UCEC 4797355 + 4797335 4797375 41 GAGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCAT GAGATCACCAGGACCCAGCCCCCATACGGGGGCGGCACCAT < 41bp 1 0.0629304491726652 1 0.238038331270218 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797355 chr17:4797344 nonsynonymous SNV 0.646 1 10 hm5C_associated_SNPs_43862 0 0 4 BUD13 POSTAR2 ENCODE chr17:4797291-4797344
64251 chr17 4797344 4797344 1 + G A UCEC 4797356 + 4797336 4797376 41 AGATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATG AGATCACCAGGACCCAGCCCCCATACGGGGGCGGCACCATG < 41bp 1 0.0758188898327105 1 0.164766281843185 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797356 chr17:4797344 nonsynonymous SNV 0.646 1 9 hm5C_associated_SNPs_43863 0 0 4 BUD13 POSTAR2 ENCODE chr17:4797291-4797344
64251 chr17 4797344 4797344 1 + G A UCEC 4797357 + 4797337 4797377 41 GATCACCGGGACCCAGCCCCCATACGGGGGCGGCACCATGG GATCACCAGGACCCAGCCCCCATACGGGGGCGGCACCATGG < 41bp 1 0.121066748955881 1 0.182424545288086 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MINK1 ENSG00000141503 CDS Human protein_coding chr17:4797357 chr17:4797344 nonsynonymous SNV 0.646 1 8 hm5C_associated_SNPs_43864 0 0 4 BUD13 POSTAR2 ENCODE chr17:4797291-4797344
64251 chr2 102486200 102486200 1 + C T UCEC 102486184 + 102486164 102486204 41 CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGATGATG < 41bp 1 0.687945262958626 1 0.589079439640045 experiment 0.624109474082747 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486184 chr2:102486200 synonymous SNV . 0 37 hm5C_associated_SNPs_43865 0 0 7 FMR1 POSTAR2 ENCODE chr2:102486153-102486258
64251 chr12 72274326 72274326 1 + C T UCEC 72274307 + 72274287 72274327 41 AGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACG AGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTATG < 41bp 1 0.720171366461153 1 0.545698463916779 experiment 0.559657267077693 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72274307 chr12:72274326 synonymous SNV . 0 40 hm5C_associated_SNPs_43866 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:72274235-72274335
64251 chr6 44116545 44116545 1 + C T UCEC 44116536 + 44116516 44116556 41 CCCACCTTGCCAGGGAGCACCTCTCCATCCGAGGCTTCATC CCCACCTTGCCAGGGAGCACCTCTCCATCTGAGGCTTCATC < 41bp 1 0.0811494497716061 1 0.280007869005203 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116536 chr6:44116545 stopgain 1.000 1 30 hm5C_associated_SNPs_43867 0 0 5 IGF2BP1 POSTAR2 ENCODE chr6:44116528-44116545
64251 chr5 179151705 179151705 1 + G A UCEC 179151689 + 179151669 179151709 41 TGGTATGGAGTATAAGAAAACTGATGCACCTCAACCGGATG TGGTATGGAGTATAAGAAAACTGATGCACCTCAACCAGATG < 41bp 1 0.450762662658505 1 0.334704428911209 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151689 chr5:179151705 synonymous SNV . 0 37 hm5C_associated_SNPs_43868 0 0 44 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151705 179151705 1 + G A UCEC 179151698 + 179151678 179151718 41 GTATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAG GTATAAGAAAACTGATGCACCTCAACCAGATGTGAAGGAAG < 41bp 1 0.50177254107951 1 0.617846131324768 experiment 0.996454917840979 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151698 chr5:179151705 synonymous SNV . 0 28 hm5C_associated_SNPs_43869 0 0 44 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151705 179151705 1 + G A UCEC 179151700 + 179151680 179151720 41 ATAAGAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAG ATAAGAAAACTGATGCACCTCAACCAGATGTGAAGGAAGAG < 41bp 1 0.209983901085618 1 0.235217481851578 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151700 chr5:179151705 synonymous SNV . 0 26 hm5C_associated_SNPs_43870 0 0 44 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr5 179151705 179151705 1 + G A UCEC 179151704 + 179151684 179151724 41 GAAAACTGATGCACCTCAACCGGATGTGAAGGAAGAGGAAG GAAAACTGATGCACCTCAACCAGATGTGAAGGAAGAGGAAG < 41bp 1 0.494210131373283 1 0.71641343832016 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CANX ENSG00000127022 CDS Human protein_coding chr5:179151704 chr5:179151705 synonymous SNV . 0 22 hm5C_associated_SNPs_43871 0 0 44 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr5:179151700-179151720
64251 chr22 39078405 39078405 1 + C A UCEC 39078388 + 39078368 39078408 41 AGATGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCCACT AGATGTTTCCGGAGAGGGTCCGGTCCGCGGCCGGAGCAACT < 41bp 1 0.33043520831703 1 0.542656540870667 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078388 chr22:39078405 synonymous SNV . 0 38 hm5C_associated_SNPs_43873 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39078392-39078424
64251 chr9 130420676 130420676 1 + C T UCEC 130420683 + 130420663 130420703 41 ATATCAATAAGCGCAGAGAGCCGCTCCCCAGCCTGGAGGCT ATATCAATAAGCGTAGAGAGCCGCTCCCCAGCCTGGAGGCT < 41bp 1 0.10651547589185 1 0.0682820081710815 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130420683 chr9:130420676 synonymous SNV . 0 14 hm5C_associated_SNPs_43874 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:130420654-130420756
64251 chr1 45279383 45279383 1 + G A UCEC 45279398 + 45279378 45279418 41 GTGTCGCCGCCGGAGAGGCACCCTGCCCCGGGAGCATCACC GTGTCACCGCCGGAGAGGCACCCTGCCCCGGGAGCATCACC < 41bp 1 0.169866587530943 1 0.0596871078014374 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BTBD19 ENSG00000222009 CDS Human protein_coding chr1:45279398 chr1:45279383 nonsynonymous SNV 0.941 1 6 hm5C_associated_SNPs_43875 0 0 1 SRSF1 POSTAR2 ENCODE chr1:45279369-45279470
64251 chr18 72345381 72345381 1 + T C UCEC 72345397 + 72345377 72345417 41 TAGGTGTGCAATTACAAGAGCATTCCTATCTTGAGAAGGGC TAGGCGTGCAATTACAAGAGCATTCCTATCTTGAGAAGGGC < 41bp 1 0.00636361050046073 1 0.0962545871734619 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72345397 chr18:72345381 synonymous SNV . 0 5 hm5C_associated_SNPs_43877 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:72345377-72345398
64251 chr22 38282851 38282851 1 + A G UCEC 38282832 + 38282812 38282852 41 ATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAG ATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGGG < 41bp 1 0.393745926030548 1 0.757546424865723 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282832 chr22:38282851 nonsynonymous SNV 0.996 3 40 hm5C_associated_SNPs_43878 0 0 4 AGGF1 POSTAR2 ENCODE chr22:38282767-38282856
64251 chr3 193336665 193336665 1 + G A UCEC 193336676 + 193336656 193336696 41 AGGTTCTCCGGAAGAAACGGCGTTTAGAGCAACAGATCGTG AGGTTCTCCAGAAGAAACGGCGTTTAGAGCAACAGATCGTG < 41bp 1 0.0401440114838721 1 0.0357896685600281 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336676 chr3:193336665 synonymous SNV . 0 10 hm5C_associated_SNPs_43880 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:193336641-193336669
64251 chr19 1440432 1440432 1 + C A UCEC 1440440 + 1440420 1440460 41 ATCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTA ATCGGGGCCACCAACTCCTCCCGCTTCATCCCTCTCAAGTA < 41bp 1 0.21522351824686 1 0.164587795734406 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440440 chr19:1440432 nonsynonymous SNV 0.828 0 13 hm5C_associated_SNPs_43881 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr19 1440432 1440432 1 + C A UCEC 1440441 + 1440421 1440461 41 TCGGGGCCACCCACTCCTCCCGCTTCATCCCTCTCAAGTAA TCGGGGCCACCAACTCCTCCCGCTTCATCCCTCTCAAGTAA < 41bp 1 0.2695617588925 1 0.362597435712814 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440441 chr19:1440432 nonsynonymous SNV 0.828 0 12 hm5C_associated_SNPs_43882 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1440377-1440458
64251 chr8 100182348 100182348 1 + A G UCEC 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCGGC < 41bp 1 0.0892186244707443 1 0.120890200138092 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182348 nonsynonymous SNV 0.998 3 39 hm5C_associated_SNPs_43883 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:100182339-100182360
64251 chr20 32664984 32664984 1 + A G UCEC 32664995 + 32664975 32665015 41 GCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGAT GCCTGCCCCGGGGGGAAGCACGGACCCGAGACGACGGCGAT < 41bp 1 0.483249954764315 1 0.726381480693817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664995 chr20:32664984 nonsynonymous SNV 0.025 2 10 hm5C_associated_SNPs_43884 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:32664955-32664985
64251 chr20 32664984 32664984 1 + A G UCEC 32664999 + 32664979 32665019 41 GCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGG GCCCCGGGGGGAAGCACGGACCCGAGACGACGGCGATGAGG < 41bp 1 0.776633334825681 1 0.420314192771912 experiment 0.446733330348638 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664999 chr20:32664984 nonsynonymous SNV 0.025 2 6 hm5C_associated_SNPs_43885 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:32664955-32664985
64251 chr20 32664984 32664984 1 + A G UCEC 32665000 + 32664980 32665020 41 CCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA CCCCGGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA < 41bp 1 0.364614591085529 1 0.555648565292358 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665000 chr20:32664984 nonsynonymous SNV 0.025 2 5 hm5C_associated_SNPs_43886 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:32664955-32664985
64251 chr5 92921104 92921104 1 + C T UCEC 92921110 + 92921090 92921130 41 ACATGCCGTGCCAACAGGAACTGTCCCATCGACCAGCACCA ACATGCCGTGCCAATAGGAACTGTCCCATCGACCAGCACCA < 41bp 1 0.0910603312061804 1 0.128621280193329 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NR2F1 ENSG00000175745 CDS Human protein_coding chr5:92921110 chr5:92921104 synonymous SNV . 0 15 hm5C_associated_SNPs_43887 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:92921056-92921105
64251 chr18 77802175 77802175 1 + C T UCEC 77802159 + 77802139 77802179 41 CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCACCGAT CTTTTGATGTCCCAGCAGACCCTGAGGAATGTGCCATCGAT < 41bp 1 0.470126009078575 1 0.163528144359589 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RBFA ENSG00000101546 CDS Human protein_coding chr18:77802159 chr18:77802175 nonsynonymous SNV 0.045 1 37 hm5C_associated_SNPs_43888 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:77802152-77802190
64251 chr19 39125658 39125658 1 + C T UCEC 39125664 + 39125644 39125684 41 AAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTC AAGGTGTGGATGAGTAAATACGGCTGGAGTGCCGACGAGTC < 41bp 1 0.730706075603326 1 0.35601282119751 experiment 0.538587848793348 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125664 chr19:39125658 synonymous SNV . 0 15 hm5C_associated_SNPs_43890 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39125634-39125663
64251 chr19 39125658 39125658 1 + C T UCEC 39125675 + 39125655 39125695 41 GAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCT GAGTAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGATCT < 41bp 1 0.241397922529133 1 0.409604787826538 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3K ENSG00000178982 CDS Human protein_coding chr19:39125675 chr19:39125658 synonymous SNV . 0 4 hm5C_associated_SNPs_43891 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39125634-39125663
64251 chr1 180034363 180034363 1 + C T UCEC 180034360 + 180034340 180034380 41 ATCTCCAGCAGTGAAACTAGCAGCATTATGCAGAAACTGAA ATCTCCAGCAGTGAAACTAGCAGTATTATGCAGAAACTGAA < 41bp 1 0.361856372694777 1 0.104857474565506 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CEP350 ENSG00000135837 CDS Human protein_coding chr1:180034360 chr1:180034363 synonymous SNV . 0 24 hm5C_associated_SNPs_43892 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:180034360-180034380
64251 chr5 34929981 34929981 1 + C T UCEC 34929965 + 34929945 34929985 41 GCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCTCAAGA GCTGGGGGTGCGGCGCGACGCCAGCGAGGAGGAGCTTAAGA < 41bp 1 0.623846038877604 1 0.46982616186142 experiment 0.752307922244791 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929965 chr5:34929981 synonymous SNV . 0 37 hm5C_associated_SNPs_43893 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:34929980-34930000
64251 chr10 76788898 76788898 1 + T C UCEC 76788889 + 76788869 76788909 41 GGATGACAGCCACATGGAGTCTGCCGAAGTGGAGAAGGAAG GGATGACAGCCACATGGAGTCTGCCGAAGCGGAGAAGGAAG < 41bp 1 0.354792978782887 1 0.173768490552902 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76788889 chr10:76788898 nonsynonymous SNV 0.030 0 30 hm5C_associated_SNPs_43894 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:76788882-76788899
64251 chr10 76788898 76788898 1 + T C UCEC 76788892 + 76788872 76788912 41 TGACAGCCACATGGAGTCTGCCGAAGTGGAGAAGGAAGAGC TGACAGCCACATGGAGTCTGCCGAAGCGGAGAAGGAAGAGC < 41bp 1 0.240134530698476 1 0.309283912181854 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KAT6B ENSG00000156650 CDS Human protein_coding chr10:76788892 chr10:76788898 nonsynonymous SNV 0.030 0 27 hm5C_associated_SNPs_43895 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:76788882-76788899
64251 chr17 28712044 28712044 1 + G A UCEC 28712048 + 28712028 28712068 41 GCATGGTGGCTCAGTGGTAGCAAGCTATCCTTTTGATGATT GCATGGTGGCTCAGTGATAGCAAGCTATCCTTTTGATGATT < 41bp 1 0.478463616533444 1 0.328896284103394 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28712048 chr17:28712044 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_43896 0 0 4 SSB POSTAR2 GSE95683,GSM2521599 chr17:28712026-28712047
64251 chr17 46128598 46128598 1 + C T UCEC 46128578 + 46128558 46128598 41 GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCC GGACGTGGATACTTACCTGACCTCACAGCTTCCCCCACTCT < 41bp 1 0.164191451853859 1 0.0193630456924438 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128578 chr17:46128598 nonsynonymous SNV 0.990 4 41 hm5C_associated_SNPs_43897 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr17 46128598 46128598 1 + C T UCEC 46128592 + 46128572 46128612 41 ACCTGACCTCACAGCTTCCCCCACTCCGGGAGATCATCCTG ACCTGACCTCACAGCTTCCCCCACTCTGGGAGATCATCCTG < 41bp 1 0.190208714925943 1 0.0524689257144928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128592 chr17:46128598 nonsynonymous SNV 0.990 4 27 hm5C_associated_SNPs_43898 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128504-46128603
64251 chr9 71851981 71851981 1 + G A UCEC 71851967 + 71851947 71851987 41 AGGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGA AGGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCAGGAAGA < 41bp 1 0.43619529996068 1 0.353593647480011 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851967 chr9:71851981 nonsynonymous SNV 0.997 4 35 hm5C_associated_SNPs_43899 0 0 4 DDX24 POSTAR2 ENCODE chr9:71851925-71851993
64251 chr9 71851981 71851981 1 + G A UCEC 71851968 + 71851948 71851988 41 GGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGAC GGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCAGGAAGAC < 41bp 1 0.756323846974905 1 0.670404016971588 experiment 0.48735230605019 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851968 chr9:71851981 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_43900 0 0 4 DDX24 POSTAR2 ENCODE chr9:71851925-71851993
64251 chr17 40766007 40766007 1 + G A UCEC 40765994 + 40765974 40766014 41 CTTCCTCATGACCGGCTACACCCCTCTCACTACGGACCAGT CTTCCTCATGACCGGCTACACCCCTCTCACTACAGACCAGT < 41bp 1 0.165901418311342 1 0.0427419543266296 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765994 chr17:40766007 synonymous SNV . 0 34 hm5C_associated_SNPs_43901 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:40765968-40766007
64251 chr15 64429090 64429090 1 + G A UCEC 64429070 + 64429050 64429090 41 TGTCTCCTAGAAAGAGAAATCCAAGGACTTCAAGAACCACG TGTCTCCTAGAAAGAGAAATCCAAGGACTTCAAGAACCACA < 41bp 1 0.140955871417489 1 0.337111473083496 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX1 ENSG00000028528 CDS Human protein_coding chr15:64429070 chr15:64429090 nonsynonymous SNV 0.987 4 41 hm5C_associated_SNPs_43904 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:64429087-64429099
64251 chr12 64814295 64814295 1 + T C UCEC 64814299 + 64814279 64814319 41 CTGGGTTTTTCAGCATTGACCAGGTTGGTAAATTTATATAA CTGGGTTTTTCAGCATCGACCAGGTTGGTAAATTTATATAA < 41bp 1 0.477513132765199 1 0.826928317546844 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control XPOT ENSG00000184575 CDS Human protein_coding chr12:64814299 chr12:64814295 synonymous SNV . 0 17 hm5C_associated_SNPs_43905 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:64814235-64814299
64251 chr2 27438251 27438251 1 + C G UCEC 27438244 + 27438224 27438264 41 GTCCAAACTTTCATCAGGCACATACCACTGTCATCATGTAA GTCCAAACTTTCATCAGGCACATACCAGTGTCATCATGTAA < 41bp 1 0.0590021536504094 1 0.075777679681778 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ATRAID ENSG00000138085 CDS Human protein_coding chr2:27438244 chr2:27438251 nonsynonymous SNV 0.442 0 28 hm5C_associated_SNPs_43906 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:27438222-27438251
64251 chr19 48259809 48259809 1 + C T UCEC 48259799 + 48259779 48259819 41 CTGTAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAG CTGTAGCCCGAGGGCAACATCCTTCGAGACTGGTTCAAGAG < 41bp 1 0.0424848185497648 1 0.136503010988235 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259799 chr19:48259809 nonsynonymous SNV 0.711 2 31 hm5C_associated_SNPs_43907 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:48259794-48259830
64251 chr19 48259809 48259809 1 + C T UCEC 48259803 + 48259783 48259823 41 AGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTC AGCCCGAGGGCAACATCCTTCGAGACTGGTTCAAGAGCTTC < 41bp 1 0.788574782507649 1 0.766736626625061 experiment 0.422850434984701 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259803 chr19:48259809 nonsynonymous SNV 0.711 2 27 hm5C_associated_SNPs_43908 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:48259794-48259830
64251 chr17 28958936 28958936 1 + C T UCEC 28958929 + 28958909 28958949 41 TGGGAGTGAGCAGCTAGACACCAATGACGAGAGTGATGTTA TGGGAGTGAGCAGCTAGACACCAATGATGAGAGTGATGTTA < 41bp 1 0.116163714380191 1 0.0689842402935028 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28958929 chr17:28958936 . . 0 28 hm5C_associated_SNPs_43909 0 0 2 DDX59 POSTAR2 ENCODE chr17:28958919-28959004
64251 chr1 27089624 27089624 1 + C T UCEC 27089608 + 27089588 27089628 41 ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCACGCCT ACCTTATGGCACACTCCCTCCAGGGAGGATGAGTCATGCCT < 41bp 1 0.604652912443713 1 0.911476016044617 experiment 0.790694175112573 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27089608 chr1:27089624 synonymous SNV . 0 37 hm5C_associated_SNPs_43910 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:27089587-27089634
64251 chr20 44037086 44037086 1 + T C UCEC 44037094 + 44037074 44037114 41 TACTTGTTTTGCTCCTCTACCCGCAGGAGCTGACATGGACC TACTTGTTTTGCCCCTCTACCCGCAGGAGCTGACATGGACC < 41bp 1 0.465932193114217 1 0.598611414432526 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44037094 chr20:44037086 synonymous SNV . 0 13 hm5C_associated_SNPs_43911 0 0 1 BUD13 POSTAR2 ENCODE chr20:44037063-44037133
64251 chr10 104678371 104678371 1 + C T UCEC 104678357 + 104678337 104678377 41 AGCGCTCGCGGCCGGGGGATCCTGCAGGCGGCTGCGGGGCG AGCGCTCGCGGCCGGGGGATCCTGCAGGCGGCTGTGGGGCG < 41bp 1 0.303169754287582 1 0.602774798870087 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104678357 chr10:104678371 nonsynonymous SNV 0.473 1 35 hm5C_associated_SNPs_43912 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:104678364-104678384
64251 chr20 25205883 25205883 1 + C G UCEC 25205875 + 25205855 25205895 41 GAGACACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT GAGACACAGCCGCAGAGCAGCCCCTTCTGATGCATGGACCT < 41bp 1 0.188946519320321 1 0.0639784038066864 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25205875 chr20:25205883 stopgain 0.003 0 29 hm5C_associated_SNPs_43913 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:25205882-25205883
64251 chr2 109347900 109347900 1 + C T UCEC 109347887 + 109347867 109347907 41 AAAATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAA AAAATACTGGCTTGAAAGAGCAGCCAAACTTTTTCCAGGAA < 41bp 1 0.200019263858789 1 0.496517419815063 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347887 chr2:109347900 synonymous SNV . 0 34 hm5C_associated_SNPs_43914 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347890 + 109347870 109347910 41 ATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTC ATACTGGCTTGAAAGAGCAGCCAAACTTTTTCCAGGAAGTC < 41bp 1 0.0680981857527072 1 0.263365596532822 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347890 chr2:109347900 synonymous SNV . 0 31 hm5C_associated_SNPs_43915 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347895 + 109347875 109347915 41 GGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCA GGCTTGAAAGAGCAGCCAAACTTTTTCCAGGAAGTCCTGCA < 41bp 1 0.0688399140034049 1 0.0366297662258148 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347895 chr2:109347900 synonymous SNV . 0 26 hm5C_associated_SNPs_43916 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347901 + 109347881 109347921 41 AAAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCAATTTAT AAAGAGCAGCCAAACTTTTTCCAGGAAGTCCTGCAATTTAT < 41bp 1 0.318793693909242 1 0.529546320438385 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347901 chr2:109347900 synonymous SNV . 0 20 hm5C_associated_SNPs_43917 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347902 + 109347882 109347922 41 AAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCAATTTATA AAGAGCAGCCAAACTTTTTCCAGGAAGTCCTGCAATTTATA < 41bp 1 0.614317051145823 1 0.845586538314819 experiment 0.771365897708354 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347902 chr2:109347900 synonymous SNV . 0 19 hm5C_associated_SNPs_43918 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347910 + 109347890 109347930 41 CCAAACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAG CCAAACTTTTTCCAGGAAGTCCTGCAATTTATAAACTAAAG < 41bp 1 0.04338749911607 1 0.194399684667587 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347910 chr2:109347900 synonymous SNV . 0 11 hm5C_associated_SNPs_43919 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr2 109347900 109347900 1 + C T UCEC 109347911 + 109347891 109347931 41 CAAACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAGG CAAACTTTTTCCAGGAAGTCCTGCAATTTATAAACTAAAGG < 41bp 1 0.291331717885334 1 0.287665963172913 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347911 chr2:109347900 synonymous SNV . 0 10 hm5C_associated_SNPs_43920 0 0 4 LIN28B POSTAR2 ENCODE chr2:109347880-109347923
64251 chr6 158497759 158497759 1 + C T UCEC 158497757 + 158497737 158497777 41 CAAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTG CAAGCGACAAATGCCGCACCCCTGCCTGGACAGACAGGGTG < 41bp 1 0.0619838000040266 1 0.0717436075210571 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497757 chr6:158497759 synonymous SNV . 0 23 hm5C_associated_SNPs_43921 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr6 158497759 158497759 1 + C T UCEC 158497758 + 158497738 158497778 41 AAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTGC AAGCGACAAATGCCGCACCCCTGCCTGGACAGACAGGGTGC < 41bp 1 0.318501407280182 1 0.426237314939499 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497758 chr6:158497759 synonymous SNV . 0 22 hm5C_associated_SNPs_43922 0 0 2 GRWD1 POSTAR2 ENCODE chr6:158497708-158497789
64251 chr12 22214296 22214296 1 + C T UCEC 22214315 + 22214295 22214335 41 ACATTTATGTATCAGGAGACCAAAAAGAAATAATATCTTAT ATATTTATGTATCAGGAGACCAAAAAGAAATAATATCTTAT < 41bp 1 0.368649267803194 1 0.63706636428833 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22214315 chr12:22214296 synonymous SNV . 0 2 hm5C_associated_SNPs_43923 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:22214251-22214297
64251 chr9 133738156 133738156 1 + G A UCEC 133738171 + 133738151 133738191 41 TCTACGTCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG TCTACATCTCCTCCGAGAGCCGCTTCAACACCCTGGCCGAG < 41bp 1 0.109479461351639 1 0.170564502477646 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738171 chr9:133738156 nonsynonymous SNV 0.986 2 6 hm5C_associated_SNPs_43924 0 0 3 PRPF8 POSTAR2 ENCODE chr9:133738123-133738177
64251 chr5 131973808 131973808 1 + G A UCEC 131973793 + 131973773 131973813 41 ATATTGAATACATAGAAATACGGTCTGATGCCGATGAAAAT ATATTGAATACATAGAAATACGGTCTGATGCCGATAAAAAT < 41bp 1 0.0830372632840123 1 0.153104960918427 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131973793 chr5:131973808 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_43925 0 0 2 AGGF1 POSTAR2 ENCODE chr5:131973772-131973814
64251 chr7 77214887 77214887 1 + G C UCEC 77214877 + 77214857 77214897 41 TAGATCATTGTAATGGCCTGCCGAGAATTTGAGATGGGAAG TAGATCATTGTAATGGCCTGCCGAGAATTTCAGATGGGAAG < 41bp 1 0.135545061589758 1 0.562607824802399 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77214877 chr7:77214887 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_43926 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:77214858-77214896
64251 chr12 6878783 6878783 1 + G A UCEC 6878771 + 6878751 6878791 41 CCTCTTTCTCCTTTGCAGGACCTGAAGGAGAAGAAGGAGAA CCTCTTTCTCCTTTGCAGGACCTGAAGGAGAAAAAGGAGAA < 41bp 1 0.134695103186978 1 0.0995012819766998 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6878771 chr12:6878783 synonymous SNV . 0 33 hm5C_associated_SNPs_43927 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:6878760-6878800
64251 chr12 6878783 6878783 1 + G A UCEC 6878772 + 6878752 6878792 41 CTCTTTCTCCTTTGCAGGACCTGAAGGAGAAGAAGGAGAAG CTCTTTCTCCTTTGCAGGACCTGAAGGAGAAAAAGGAGAAG < 41bp 1 0.520757545229516 1 0.371726632118225 experiment 0.958484909540967 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMS ENSG00000159335 CDS Human protein_coding chr12:6878772 chr12:6878783 synonymous SNV . 0 32 hm5C_associated_SNPs_43928 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:6878760-6878800
64251 chr2 36668430 36668430 1 + T C UCEC 36668446 + 36668426 36668466 41 CCGCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT CCGCCGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATT < 41bp 1 0.671599463965713 1 0.686736583709717 experiment 0.656801072068573 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668446 chr2:36668430 nonsynonymous SNV 1.000 4 5 hm5C_associated_SNPs_43929 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:36668419-36668457
64251 chr2 36668430 36668430 1 + T C UCEC 36668448 + 36668428 36668468 41 GCTGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCT GCCGTGAAGTCCAGTTCTCTCCACGTTGTCCTGAAGATTCT < 41bp 1 0.502154955495695 1 0.427867740392685 experiment 0.995690089008609 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668448 chr2:36668430 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_43930 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:36668419-36668457
64251 chr13 97928589 97928589 1 + T A UCEC 97928608 + 97928588 97928628 41 ATGCAAATTTGCTCATCCCCCCAAAAGTTGTCAGGTTGAAA AAGCAAATTTGCTCATCCCCCCAAAAGTTGTCAGGTTGAAA < 41bp 1 0.202007015234006 1 0.353849023580551 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MBNL2 ENSG00000139793 CDS Human protein_coding chr13:97928608 chr13:97928589 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_43931 0 0 1 RBM15 POSTAR2 ENCODE chr13:97928579-97928650
64251 chr1 32782309 32782309 1 + G A UCEC 32782298 + 32782278 32782318 41 GCCAATGCTGAGGAGATGACCAAGTACCACAGCGATGACTA GCCAATGCTGAGGAGATGACCAAGTACCACAACGATGACTA < 41bp 1 0.603469107853876 1 0.402974903583527 experiment 0.793061784292247 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32782298 chr1:32782309 nonsynonymous SNV 0.961 2 32 hm5C_associated_SNPs_43932 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32782285-32782361
64251 chr11 61545217 61545217 1 + C T UCEC 61545235 + 61545215 61545255 41 ACCGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCA ACTGAGCAATTGAAGAGGATCTCGCGCATGCGGCTGGTGCA < 41bp 1 0.399093195255086 1 0.415896505117416 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYRF ENSG00000124920 CDS Human protein_coding chr11:61545235 chr11:61545217 synonymous SNV . 0 3 hm5C_associated_SNPs_43933 0 0 3 BUD13 POSTAR2 ENCODE chr11:61545202-61545232
64251 chr4 106861778 106861778 1 + G T UCEC 106861769 + 106861749 106861789 41 GCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGT GCAAATGTAAAGAAGGATACCAGGGTGATTGACTGACTTGT < 41bp 1 0.762298141851062 1 0.680374801158905 experiment 0.475403716297876 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NPNT ENSG00000168743 CDS Human protein_coding chr4:106861769 chr4:106861778 stopgain 0.804 1 30 hm5C_associated_SNPs_43936 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:106861761-106861783
64251 chr17 38450694 38450694 1 + T C UCEC 38450687 + 38450667 38450707 41 CTAGAGAAAAATGTAAGCCACAGCTGTTGAACTTCCCACCT CTAGAGAAAAATGTAAGCCACAGCTGTCGAACTTCCCACCT < 41bp 1 0.560661174843277 1 0.372536599636078 experiment 0.878677650313446 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450687 chr17:38450694 nonsynonymous SNV 0.990 3 28 hm5C_associated_SNPs_43937 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38450644-38450700
64251 chr15 77756709 77756709 1 + G A UCEC 77756689 + 77756669 77756709 41 GTTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATG GTTGCTTCAGAGTGAGTCTTCAAATGCAGCAGAAGGCAATA < 41bp 1 0.48873683922215 1 0.272305756807327 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HMG20A ENSG00000140382 CDS Human protein_coding chr15:77756689 chr15:77756709 nonsynonymous SNV 0.844 3 41 hm5C_associated_SNPs_43938 0 0 1 GRWD1 POSTAR2 ENCODE chr15:77756593-77756746
64251 chr10 103901204 103901204 1 + G C UCEC 103901206 + 103901186 103901226 41 GTTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGG GTTCCACATGTACCTATGCGCCCTTGGGATGGGGCCCAGGG < 41bp 1 0.0912286661561218 1 0.0184653103351593 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901206 chr10:103901204 nonsynonymous SNV 0.977 2 19 hm5C_associated_SNPs_43939 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr10 103901204 103901204 1 + G C UCEC 103901207 + 103901187 103901227 41 TTCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGC TTCCACATGTACCTATGCGCCCTTGGGATGGGGCCCAGGGC < 41bp 1 0.0533050030500608 1 0.0410152971744537 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901207 chr10:103901204 nonsynonymous SNV 0.977 2 18 hm5C_associated_SNPs_43940 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr10 103901204 103901204 1 + G C UCEC 103901208 + 103901188 103901228 41 TCCACATGTACCTATGGGCCCTTGGGATGGGGCCCAGGGCC TCCACATGTACCTATGCGCCCTTGGGATGGGGCCCAGGGCC < 41bp 1 0.445726002390636 1 0.141625344753265 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901208 chr10:103901204 nonsynonymous SNV 0.977 2 17 hm5C_associated_SNPs_43941 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr10 103901204 103901204 1 + G C UCEC 103901220 + 103901200 103901240 41 TATGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCC TATGCGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCC < 41bp 1 0.157248740404663 1 0.262018799781799 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901220 chr10:103901204 nonsynonymous SNV 0.977 2 5 hm5C_associated_SNPs_43942 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr10 103901204 103901204 1 + G C UCEC 103901221 + 103901201 103901241 41 ATGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCA ATGCGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCA < 41bp 1 0.345546450959953 1 0.69041121006012 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901221 chr10:103901204 nonsynonymous SNV 0.977 2 4 hm5C_associated_SNPs_43943 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr10 103901204 103901204 1 + G C UCEC 103901222 + 103901202 103901242 41 TGGGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCAT TGCGCCCTTGGGATGGGGCCCAGGGCCTCAACATGCTCCAT < 41bp 1 0.621502495481291 1 0.74058324098587 experiment 0.756995009037418 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103901222 chr10:103901204 nonsynonymous SNV 0.977 2 3 hm5C_associated_SNPs_43944 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:103901173-103901205
64251 chr21 34634952 34634952 1 + A G UCEC 34634957 + 34634937 34634977 41 AACTCCTGAGCTCAAACAGTCGTCCTGCCTAAGCTTCCCCA AACTCCTGAGCTCAAGCAGTCGTCCTGCCTAAGCTTCCCCA < 41bp 1 0.0864923444170237 1 0.339205265045166 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34634957 chr21:34634952 synonymous SNV . 0 16 hm5C_associated_SNPs_43947 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:34634917-34634957
64251 chr21 34634952 34634952 1 + A G UCEC 34634961 + 34634941 34634981 41 CCTGAGCTCAAACAGTCGTCCTGCCTAAGCTTCCCCAGTAG CCTGAGCTCAAGCAGTCGTCCTGCCTAAGCTTCCCCAGTAG < 41bp 1 0.302521572853914 1 0.222620189189911 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34634961 chr21:34634952 synonymous SNV . 0 12 hm5C_associated_SNPs_43948 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:34634917-34634957
64251 chr1 16257975 16257975 1 + G A UCEC 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCCCAGGCAGAGAACAACGTAGATCCAGAGCCTGACAG < 41bp 1 0.271018742106689 1 0.133114159107208 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257975 nonsynonymous SNV 0.057 1 17 hm5C_associated_SNPs_43950 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:16257874-16257989
64251 chr3 9408636 9408636 1 + G T UCEC 9408634 + 9408614 9408654 41 ATAACTTATTTGTGGTGGTTCAGGAGTTTCAAGATTACCAG ATAACTTATTTGTGGTGGTTCATGAGTTTCAAGATTACCAG < 41bp 1 0.666216666919164 1 0.164112478494644 experiment 0.667566666161671 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9408634 chr3:9408636 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_43955 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9408611-9408651
64251 chr5 65455065 65455065 1 + C A UCEC 65455056 + 65455036 65455076 41 TGCCTCTGCAGGTAAAATCCCAGAGGAATCCAAAGCCCTCT TGCCTCTGCAGGTAAAATCCCAGAGGAATACAAAGCCCTCT < 41bp 1 0.679950099673905 1 0.809311866760254 experiment 0.64009980065219 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control SREK1 ENSG00000153914 CDS Human protein_coding chr5:65455056 chr5:65455065 nonsynonymous SNV 0.999 0 30 hm5C_associated_SNPs_43956 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:65455047-65455070
64251 chr3 157841661 157841661 1 + G T UCEC 157841658 + 157841638 157841678 41 ATTATATTTTATTTCAGACGCAGGCATCGATCAAGCAGTAG ATTATATTTTATTTCAGACGCAGTCATCGATCAAGCAGTAG < 41bp 1 0.107094297105426 1 0.0326999127864838 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841658 chr3:157841661 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_43957 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr3 157841661 157841661 1 + G T UCEC 157841665 + 157841645 157841685 41 TTTATTTCAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT TTTATTTCAGACGCAGTCATCGATCAAGCAGTAGCTCTTCT < 41bp 1 0.13816896479047 1 0.343939125537872 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841665 chr3:157841661 nonsynonymous SNV 0.998 4 17 hm5C_associated_SNPs_43958 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157841658-157841698
64251 chr1 95639445 95639445 1 + G A UCEC 95639425 + 95639405 95639445 41 CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCG CGCCTGCTTGCAGAGCTTTCCAGCCCGTTTGTGAATCAGCA < 41bp 1 0.270501626515241 1 0.472855150699615 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TMEM56;TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 CDS Human other chr1:95639425 chr1:95639445 nonsynonymous SNV 0.987 5 41 hm5C_associated_SNPs_43959 0 0 1 YBX3 POSTAR2 ENCODE chr1:95639424-95639445
64251 chr22 22025335 22025335 1 + G A UCEC 22025316 + 22025296 22025336 41 CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGT CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCAT < 41bp 1 0.562476715045957 1 0.349373579025269 experiment 0.875046569908087 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22025316 chr22:22025335 nonsynonymous SNV 0.853 1 40 hm5C_associated_SNPs_43960 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:22025279-22025345
64251 chr16 22019662 22019662 1 + G A UCEC 22019663 + 22019643 22019683 41 CTCAGGATGTCTCTTTCTGGCCGCCGATATCTTCGCCATCG CTCAGGATGTCTCTTTCTGACCGCCGATATCTTCGCCATCG < 41bp 1 0.513417443271838 1 0.04585200548172 experiment 0.973165113456323 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control C16orf52 ENSG00000185716 CDS Human protein_coding chr16:22019663 chr16:22019662 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_43961 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:22019660-22019680
64251 chr5 33459945 33459945 1 + C T UCEC 33459929 + 33459909 33459949 41 CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACCCATG CCTTTGAGGTGGAGAAGGAGCTGTTTGCCCTGAAACTCATG < 41bp 1 0.444675870260336 1 0.089888870716095 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TARS ENSG00000113407 CDS Human protein_coding chr5:33459929 chr5:33459945 nonsynonymous SNV 0.985 4 37 hm5C_associated_SNPs_43962 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:33459846-33459962
64251 chr21 47970642 47970642 1 + C T UCEC 47970626 + 47970606 47970646 41 TGCCCTCACACCTGTGTTACCAACCTCCCCAAACCTCGTCA TGCCCTCACACCTGTGTTACCAACCTCCCCAAACCTTGTCA < 41bp 1 0.211134664593406 1 0.191577464342117 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DIP2A ENSG00000160305 CDS Human protein_coding chr21:47970626 chr21:47970642 nonsynonymous SNV 0.998 4 37 hm5C_associated_SNPs_43968 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr21:47970612-47970647
64251 chr13 52293441 52293441 1 + C T UCEC 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGTGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA < 41bp 1 0.556659225355364 1 0.952416718006134 experiment 0.886681549289272 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293441 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_43971 0 0 3 DDX24 POSTAR2 ENCODE chr13:52293432-52293486
64251 chr21 48068522 48068522 1 + G A UCEC 48068504 + 48068484 48068524 41 ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCGGCC ACTGGGATCATCAGTCTCTTCTGTGCACACTATGCGCGACC < 41bp 1 0.697162347922551 1 0.731600165367126 experiment 0.605675304154898 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068504 chr21:48068522 synonymous SNV 0.008 0 39 hm5C_associated_SNPs_43975 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr9 110068769 110068769 1 + C A UCEC 110068756 + 110068736 110068776 41 CCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCT CCACCACCACAACTGTGGCTCAGGCTCCAACCCATGTCCCT < 41bp 1 0.661476398830894 1 0.730191051959991 experiment 0.677047202338212 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068756 chr9:110068769 nonsynonymous SNV 0.112 2 34 hm5C_associated_SNPs_43976 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:110068750-110068791
64251 chr7 127342516 127342516 1 + G A UCEC 127342535 + 127342515 127342555 41 AGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT AATGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT < 41bp 1 0.0375202993178555 1 0.0946151614189148 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127342535 chr7:127342516 nonsynonymous SNV 1.000 1 2 hm5C_associated_SNPs_43977 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr7:127342500-127342525
64251 chr19 803576 803576 1 + C T UCEC 803568 + 803548 803588 41 CCTTCTCTTGCAGCGGGGATCTGACGAGCTTTTCTCTACTT CCTTCTCTTGCAGCGGGGATCTGACGAGTTTTTCTCTACTT < 41bp 1 0.399002705465348 1 0.252969771623611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTBP1 ENSG00000011304 CDS Human protein_coding chr19:803568 chr19:803576 nonsynonymous SNV 0.900 3 29 hm5C_associated_SNPs_43978 0 0 28 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:803540-803600
64251 chr8 48641588 48641588 1 + G A UCEC 48641587 + 48641567 48641607 41 CCTGGACTGCCGCTCAAGACCGCAGTGCAGAGTGAAGGTCA CCTGGACTGCCGCTCAAGACCACAGTGCAGAGTGAAGGTCA < 41bp 1 0.64233905541336 1 0.169075399637222 experiment 0.715321889173279 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPIDR ENSG00000164808 CDS Human protein_coding chr8:48641587 chr8:48641588 synonymous SNV . 0 22 hm5C_associated_SNPs_43980 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:48641562-48641598
64251 chr9 106858491 106858491 1 + C T UCEC 106858485 + 106858465 106858505 41 AATGGGCAGGCTGGTATTACCAAAGCCTCTGTGTCAATCAC AATGGGCAGGCTGGTATTACCAAAGCTTCTGTGTCAATCAC < 41bp 1 0.628075679355909 1 0.55999094247818 experiment 0.743848641288182 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106858485 chr9:106858491 synonymous SNV . 0 27 hm5C_associated_SNPs_43982 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:106858487-106858519
64251 chr19 45648517 45648517 1 + C T UCEC 45648504 + 45648484 45648524 41 GCCTGGACCTCGACCGTGAACCCAAGAAAGAGGCGGTGAGC GCCTGGACCTCGACCGTGAACCCAAGAAAGAGGTGGTGAGC < 41bp 1 0.467877089820979 1 0.109747707843781 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP1R37 ENSG00000104866 CDS Human protein_coding chr19:45648504 chr19:45648517 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_43984 0 0 3 PPIG POSTAR2 ENCODE chr19:45648486-45648563
64251 chr19 13054600 13054600 1 + G A UCEC 13054601 + 13054581 13054621 41 GAGGAAGAAGACAAGAAACGCAAAGAGGAGGAGGAGGCAGA GAGGAAGAAGACAAGAAACACAAAGAGGAGGAGGAGGCAGA < 41bp 1 0.583573292191997 1 0.576082766056061 experiment 0.832853415616006 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054601 chr19:13054600 nonsynonymous SNV 0.995 0 20 hm5C_associated_SNPs_43985 0 0 59 PTBP1 POSTAR2 GSE19323,GSM480479 chr19:13054600-13054620
64251 chr12 110765484 110765484 1 + C A UCEC 110765502 + 110765482 110765522 41 AACTAGATGAATTTGGGGAACAGCTTTCCAAAGTCATCTCC AAATAGATGAATTTGGGGAACAGCTTTCCAAAGTCATCTCC < 41bp 1 0.310628001745966 1 0.189018219709396 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110765502 chr12:110765484 nonsynonymous SNV 0.998 3 3 hm5C_associated_SNPs_43986 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110765398-110765647
64251 chr17 35310490 35310490 1 + C T UCEC 35310470 + 35310450 35310490 41 GGGATGACGCGGAAGACTCCCAAGGCGAGAGTGAGGAAGAC GGGATGACGCGGAAGACTCCCAAGGCGAGAGTGAGGAAGAT < 41bp 1 0.735060040636619 1 0.631352663040161 experiment 0.529879918726761 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AATF ENSG00000108270 CDS Human other chr17:35310470 chr17:35310490 synonymous SNV . 0 41 hm5C_associated_SNPs_43987 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35310385-35310540
64251 chrX 47774347 47774347 1 + C T UCEC 47774348 + 47774328 47774368 41 AAATTTGGAATTAAGCCTTCCCAGAGGAGAATTTCTGGGAA AAATTTGGAATTAAGCCTTTCCAGAGGAGAATTTCTGGGAA < 41bp 1 0.29758287443409 1 0.795053839683533 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47774348 chrX:47774347 nonsynonymous SNV 0.636 1 20 hm5C_associated_SNPs_43988 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:47774329-47774353
64251 chr17 45773491 45773491 1 + T C UCEC 45773473 + 45773453 45773493 41 GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGTTC GTGTGGGCCGCGGCCCGGCCCTCACCATGGAGTCCATGCTC < 41bp 1 0.48402305715165 1 0.0847546458244324 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TBKBP1 ENSG00000198933 CDS Human protein_coding chr17:45773473 chr17:45773491 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_43989 0 0 1 GRWD1 POSTAR2 ENCODE chr17:45773488-45773577
64251 chr1 76255000 76255000 1 + G A UCEC 76255012 + 76254992 76255032 41 CTAGTATCGGACATGATCCTCATCTTTTATACACTCTTAGT CTAGTATCAGACATGATCCTCATCTTTTATACACTCTTAGT < 41bp 1 0.199563790815449 1 0.0490074157714844 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76255012 chr1:76255000 nonsynonymous SNV 0.993 2 9 hm5C_associated_SNPs_43990 0 0 42 TARDBP POSTAR2 DRA001158,DRS012386 chr1:76254832-76255015
64251 chr1 229783430 229783430 1 + G A UCEC 229783428 + 229783408 229783448 41 TCCCTTTGGACCATCTGAAGCCGCTGGAGTATGGAAGCGTC TCCCTTTGGACCATCTGAAGCCACTGGAGTATGGAAGCGTC < 41bp 1 0.183754693624634 1 0.195274710655212 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control URB2 ENSG00000135763 CDS Human protein_coding chr1:229783428 chr1:229783430 synonymous SNV . 0 23 hm5C_associated_SNPs_43991 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229783383-229783431
64251 chr3 9517403 9517403 1 + G A UCEC 9517422 + 9517402 9517442 41 GGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGC GATATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGC < 41bp 1 0.0605919666112357 1 0.0587697327136993 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517422 chr3:9517403 synonymous SNV . 0 2 hm5C_associated_SNPs_43992 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:9517386-9517423
64251 chr9 134382806 134382806 1 + C T UCEC 134382812 + 134382792 134382832 41 GCTGCCAGCACTCGCGGGGGCCTTGTCGGTCCCCATGGCCT GCTGCCAGCACTCGTGGGGGCCTTGTCGGTCCCCATGGCCT < 41bp 1 0.0576256505741867 1 0.0443802177906036 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POMT1 ENSG00000130714 CDS Human protein_coding chr9:134382812 chr9:134382806 nonsynonymous SNV 0.002 1 15 hm5C_associated_SNPs_43994 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr9:134382795-134382822
64251 chr4 184192351 184192351 1 + C A UCEC 184192371 + 184192351 184192391 41 CTGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGAC ATGTATTTCAACCAAACCAGCCGTTAGTAGATTCTATAGAC < 41bp 1 0.027796499796573 1 0.0528261661529541 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WWC2 ENSG00000151718 CDS Human protein_coding chr4:184192371 chr4:184192351 nonsynonymous SNV 0.127 0 1 hm5C_associated_SNPs_43995 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:184192327-184192354
64251 chr17 78335550 78335550 1 + C T UCEC 78335559 + 78335539 78335579 41 CCCAAGAAGTTCGTGGACATCTTTCAGCAGACTCCTCTGGG CCCAAGAAGTTTGTGGACATCTTTCAGCAGACTCCTCTGGG < 41bp 1 0.0259443480068079 1 0.0501239597797394 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78335559 chr17:78335550 synonymous SNV . 0 12 hm5C_associated_SNPs_43998 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:78335540-78335560
64251 chr18 33289699 33289699 1 + C A UCEC 33289684 + 33289664 33289704 41 TTAGAGACTGCAATGGAAGTCGGTCCCAGCAGTGGCTTCTT TTAGAGACTGCAATGGAAGTCGGTCCCAGCAGTGGATTCTT < 41bp 1 0.378511385794102 1 0.582371890544891 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33289684 chr18:33289699 nonsynonymous SNV 1.000 1 36 hm5C_associated_SNPs_44000 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:33289662-33289706
64251 chr19 13930219 13930219 1 + C A UCEC 13930238 + 13930218 13930258 41 CCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT CACATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT < 41bp 1 0.10763661219602 1 0.0483099222183228 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13930238 chr19:13930219 nonsynonymous SNV 0.994 4 2 hm5C_associated_SNPs_44001 0 0 1 DDX24 POSTAR2 ENCODE chr19:13930170-13930227
64251 chr20 39795165 39795165 1 + C T UCEC 39795148 + 39795128 39795168 41 GAGCCTGACCAGAGCACAGGCTGAGCACATGCTAATGCGCG GAGCCTGACCAGAGCACAGGCTGAGCACATGCTAATGTGCG < 41bp 1 0.313372384665807 1 0.171475291252136 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLCG1 ENSG00000124181 CDS Human protein_coding chr20:39795148 chr20:39795165 nonsynonymous SNV 0.969 5 38 hm5C_associated_SNPs_44002 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:39795161-39795192
64251 chr13 53216852 53216852 1 + G A UCEC 53216848 + 53216828 53216868 41 GGTGGATGCAGCTATGAATACAACGCCACACAAGGTGGATG GGTGGATGCAGCTATGAATACAACACCACACAAGGTGGATG < 41bp 1 0.759266988238287 1 0.0584892928600311 experiment 0.481466023523425 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HNRNPA1L2 ENSG00000139675 CDS Human protein_coding chr13:53216848 chr13:53216852 synonymous SNV . 0 25 hm5C_associated_SNPs_44003 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:53216832-53216865
64251 chr11 986878 986878 1 + G A UCEC 986875 + 986855 986895 41 CGCTACCTGGCCCTGGAGAGCATGTGCACGCTGGCCAGCTC CGCTACCTGGCCCTGGAGAGCATATGCACGCTGGCCAGCTC < 41bp 1 0.196010040881724 1 0.329761862754822 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AP2A2 ENSG00000183020 CDS Human protein_coding chr11:986875 chr11:986878 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_44004 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:986877-986878
64251 chr2 99179976 99179976 1 + G A UCEC 99179968 + 99179948 99179988 41 TACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGAT TACCCGCTGCTGACCACTCTCACCGACTACGTGGCCATGAT < 41bp 1 0.653830481460544 1 0.389268189668655 experiment 0.692339037078913 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99179968 chr2:99179976 nonsynonymous SNV 0.998 4 29 hm5C_associated_SNPs_44005 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr2:99179971-99179993
64251 chr9 139751740 139751740 1 + C T UCEC 139751742 + 139751722 139751762 41 ACCAGCCTGGCTCCCATGCCCAGTACCAGGTGAGGCCTGGC ACCAGCCTGGCTCCCATGTCCAGTACCAGGTGAGGCCTGGC < 41bp 1 0.498797948552884 1 0.607147455215454 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAMDC4 ENSG00000177943 CDS Human protein_coding chr9:139751742 chr9:139751740 nonsynonymous SNV 0.006 0 19 hm5C_associated_SNPs_44006 0 0 4 BUD13 POSTAR2 ENCODE chr9:139751724-139751745
64251 chr2 74326583 74326583 1 + C T UCEC 74326589 + 74326569 74326609 41 TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC TCCCCCGCGAGGTCTGACGCCTGCCCGAGCCTGCCAAGTCC < 41bp 1 0.295120257099187 1 0.0657806396484375 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74326589 chr2:74326583 stopgain 0.999 1 15 hm5C_associated_SNPs_44007 0 0 1 BUD13 POSTAR2 ENCODE chr2:74326575-74326602
64251 chr16 89985481 89985481 1 + G A UCEC 89985491 + 89985471 89985511 41 CCATGCCTGGGCTGACCTGTCCAGCCAGGGAGAGGGTGTGA CCATGCCTGGACTGACCTGTCCAGCCAGGGAGAGGGTGTGA < 41bp 1 0.380256728649121 1 0.337446302175522 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MC1R ENSG00000256390 ncRNA_exonic Human other chr16:89985491 chr16:89985481 . . 0 11 hm5C_associated_SNPs_44008 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:89985460-89985484
64251 chr20 3802803 3802803 1 + G A UCEC 3802800 + 3802780 3802820 41 CTCATTCACACCTTGAGGGCCCCGAATACTGAGGACACGGG CTCATTCACACCTTGAGGGCCCCAAATACTGAGGACACGGG < 41bp 1 0.194841470043073 1 0.0420036613941193 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3802800 chr20:3802803 synonymous SNV . 0 24 hm5C_associated_SNPs_44009 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:3802803-3802826
64251 chr1 150280580 150280580 1 + G A UCEC 150280582 + 150280562 150280602 41 AAAGCTATGAAAGGTGCCGGCGGATCTACAACATGGAAATG AAAGCTATGAAAGGTGCCAGCGGATCTACAACATGGAAATG < 41bp 1 0.493040242934249 1 0.732397198677063 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280582 chr1:150280580 nonsynonymous SNV 0.994 0 19 hm5C_associated_SNPs_44012 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:150280570-150280596
64251 chr10 27469888 27469888 1 + C T UCEC 27469905 + 27469885 27469925 41 CTGCGGTAGACTGGTGGGCACTTGGAGTTTGCTTGTTTGAA CTGTGGTAGACTGGTGGGCACTTGGAGTTTGCTTGTTTGAA < 41bp 1 0.262722434451683 1 0.279394328594208 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MASTL ENSG00000120539 CDS Human protein_coding chr10:27469905 chr10:27469888 nonsynonymous SNV 0.945 3 4 hm5C_associated_SNPs_44013 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:27469877-27469903
64251 chr22 32889239 32889239 1 + G T UCEC 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTTGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT < 41bp 1 0.531612790021845 1 0.423166483640671 experiment 0.93677441995631 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889239 nonsynonymous SNV 0.995 4 7 hm5C_associated_SNPs_44015 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32889222-32889255
64251 chr19 11553320 11553320 1 + G T UCEC 11553302 + 11553282 11553322 41 GAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAAGCT GAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAATCT < 41bp 1 0.353872765681707 1 0.42739400267601 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553302 chr19:11553320 nonsynonymous SNV 0.996 1 39 hm5C_associated_SNPs_44016 0 0 17 AARS POSTAR2 ENCODE chr19:11553320-11553331
64251 chr19 11553320 11553320 1 + G T UCEC 11553314 + 11553294 11553334 41 AGAGAGGCCAAAGAGCAGCACCAGAAGCTGTGGGAAGGTAT AGAGAGGCCAAAGAGCAGCACCAGAATCTGTGGGAAGGTAT < 41bp 1 0.362109008881767 1 0.109503626823425 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11553314 chr19:11553320 nonsynonymous SNV 0.996 1 27 hm5C_associated_SNPs_44017 0 0 17 AARS POSTAR2 ENCODE chr19:11553320-11553331
64251 chr12 58001321 58001321 1 + C T UCEC 58001304 + 58001284 58001324 41 AGCCCCAGAATGGGCGGATGCTGGTCTCTAAGGACGCCACC AGCCCCAGAATGGGCGGATGCTGGTCTCTAAGGACGCTACC < 41bp 1 0.758361042542878 1 0.07034632563591 experiment 0.483277914914244 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001304 chr12:58001321 synonymous SNV . 0 38 hm5C_associated_SNPs_44018 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:58001320-58001340
64251 chr12 58001321 58001321 1 + C T UCEC 58001336 + 58001316 58001356 41 GACGCCACCCTCCTACTGCCCAGCTATGAGAAGTACGGCAC GACGCTACCCTCCTACTGCCCAGCTATGAGAAGTACGGCAC < 41bp 1 0.599995255878307 1 0.13177078962326 experiment 0.800009488243386 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001336 chr12:58001321 synonymous SNV . 0 6 hm5C_associated_SNPs_44019 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:58001320-58001340
64251 chr6 160494422 160494422 1 + G T UCEC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATATGCCCAT < 41bp 1 0.35681981254414 1 0.8258056640625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494422 nonsynonymous SNV 0.784 2 35 hm5C_associated_SNPs_44020 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:160494416-160494454
64251 chr1 183101606 183101606 1 + A G UCEC 183101623 + 183101603 183101643 41 ACAACCTGCTTCTGAGGACACTGGCAGGAGAAAATCAAACA ACAGCCTGCTTCTGAGGACACTGGCAGGAGAAAATCAAACA < 41bp 1 0.301559320458501 1 0.287742435932159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183101623 chr1:183101606 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_44021 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:183101579-183101608
64251 chr12 132335767 132335767 1 + C T UCEC 132335772 + 132335752 132335792 41 TGCTGCTGCTGCTGCCGCCACTGTCACCAGGCGCCCTGTGG TGCTGCTGCTGCTGCTGCCACTGTCACCAGGCGCCCTGTGG < 41bp 1 0.17492324360566 1 0.109468996524811 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MMP17 ENSG00000198598 CDS Human protein_coding chr12:132335772 chr12:132335767 nonsynonymous SNV 0.001 0 16 hm5C_associated_SNPs_44022 0 0 1 DDX55 POSTAR2 ENCODE chr12:132335758-132335834
64251 chr6 161508794 161508794 1 + G A UCEC 161508811 + 161508791 161508831 41 TTTGCAGTTACTCAATGCAGCTGCAGGAAAGGACTGTTCAA TTTACAGTTACTCAATGCAGCTGCAGGAAAGGACTGTTCAA < 41bp 1 0.613802438796106 1 0.514565229415894 experiment 0.772395122407788 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161508811 chr6:161508794 synonymous SNV . 0 4 hm5C_associated_SNPs_44023 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:161508785-161508816
64251 chr15 99434701 99434701 1 + C T UCEC 99434698 + 99434678 99434718 41 CTATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCT CTATGCCGGTGTCTGTGTGCCTGTCTGCCCGCCCAACACCT < 41bp 1 0.117071995837962 1 0.174305438995361 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99434698 chr15:99434701 nonsynonymous SNV 0.721 1 24 hm5C_associated_SNPs_44024 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:99434677-99434714
64251 chr9 133506095 133506095 1 + C T UCEC 133506078 + 133506058 133506098 41 CGTGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACCCCA CGTGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACTCCA < 41bp 1 0.284327067493059 1 0.0879555344581604 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133506078 chr9:133506095 nonsynonymous SNV 0.999 3 38 hm5C_associated_SNPs_44026 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133506088-133506116
64251 chr9 133506095 133506095 1 + C T UCEC 133506080 + 133506060 133506100 41 TGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACCCCAAC TGGAGCTTCAGAGGAACCCCCCTCCCAACAGCGACTCCAAC < 41bp 1 0.0295746637297017 1 0.268026411533356 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133506080 chr9:133506095 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_44027 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133506088-133506116
64251 chr19 10225355 10225355 1 + C A UCEC 10225362 + 10225342 10225382 41 CCAAGCCCTGCCCCTCAATGCCACAGCCGCCCCTAAACCGT CCAAGCCCTGCCCATCAATGCCACAGCCGCCCCTAAACCGT < 41bp 1 0.558686442755544 1 0.200268536806107 experiment 0.882627114488912 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225362 chr19:10225355 nonsynonymous SNV 0.001 2 14 hm5C_associated_SNPs_44028 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10225331-10225367
64251 chr20 35835747 35835747 1 + C T UCEC 35835730 + 35835710 35835750 41 GCAAGAAGAACTTTGAGTCCCTCTCCGAAGCCTTCAGCGTG GCAAGAAGAACTTTGAGTCCCTCTCCGAAGCCTTCAGTGTG < 41bp 1 0.206769005854187 1 0.0480694770812988 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35835730 chr20:35835747 synonymous SNV . 0 38 hm5C_associated_SNPs_44029 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:35835715-35835747
64251 chr6 139487469 139487469 1 + A G UCEC 139487463 + 139487443 139487483 41 GATCTGCAGCTTCGGTAGGCCGGTGGACCTGGAGAAGGACG GATCTGCAGCTTCGGTAGGCCGGTGGGCCTGGAGAAGGACG < 41bp 1 0.556894411119041 1 0.502622067928314 experiment 0.886211177761918 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HECA ENSG00000112406 CDS Human protein_coding chr6:139487463 chr6:139487469 nonsynonymous SNV 0.999 2 27 hm5C_associated_SNPs_44031 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr6:139487430-139487473
64251 chr3 32483440 32483440 1 + G A UCEC 32483437 + 32483417 32483457 41 TTTGCGACTTGATAATGATCCTCGCCTTTTACCTGGTCCAC TTTGCGACTTGATAATGATCCTCACCTTTTACCTGGTCCAC < 41bp 1 0.263767917004247 1 0.0865810215473175 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483437 chr3:32483440 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_44032 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:32483429-32483467
64251 chr7 87005035 87005035 1 + G A UCEC 87005024 + 87005004 87005044 41 CAGCATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTT CAGCATTAACTAGTGAGGAGCGAACTCGATGAGCTAAGGTT < 41bp 1 0.15230198730842 1 0.371693015098572 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CROT ENSG00000005469 CDS Human protein_coding chr7:87005024 chr7:87005035 stopgain 0.997 1 32 hm5C_associated_SNPs_44037 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr5 109155393 109155393 1 + G A UCEC 109155379 + 109155359 109155399 41 ATCTTTTAAAGATCTCTTTTCGAGCACATATACCGCCATTG ATCTTTTAAAGATCTCTTTTCGAGCACATATACCACCATTG < 41bp 1 0.174387635992797 1 0.568516314029694 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109155379 chr5:109155393 synonymous SNV . 0 35 hm5C_associated_SNPs_44039 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr5:109155380-109155409
64251 chr18 74620325 74620325 1 + G T UCEC 74620335 + 74620315 74620355 41 AGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGC AGCCTCGATATATGACAGCACTGTAGACCAGCAGAGCATGC < 41bp 1 0.420147728731925 1 0.117629885673523 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74620335 chr18:74620325 nonsynonymous SNV 0.002 1 11 hm5C_associated_SNPs_44040 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr18:74620320-74620340
64251 chr17 66526547 66526547 1 + G A UCEC 66526558 + 66526538 66526578 41 TCCTCAAACGAAACATCCAGCAGTACAACAGTTTTGTGTCA TCCTCAAACAAAACATCCAGCAGTACAACAGTTTTGTGTCA < 41bp 1 0.444957560363756 1 0.889625430107117 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66526558 chr17:66526547 nonsynonymous SNV 0.997 5 10 hm5C_associated_SNPs_44041 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:66526482-66526571
64251 chr19 10935770 10935770 1 + C A UCEC 10935765 + 10935745 10935785 41 GATGGGGCCCAGGAGAACACCTTCTCCATGGACCCCCAACT GATGGGGCCCAGGAGAACACCTTCTACATGGACCCCCAACT < 41bp 1 0.18129933603092 1 0.199826955795288 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10935765 chr19:10935770 nonsynonymous SNV 1.000 5 26 hm5C_associated_SNPs_44042 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:10935760-10935781
64251 chr16 1793361 1793361 1 + G A UCEC 1793369 + 1793349 1793389 41 ACCTCCCTGAACGTGTTCCCCCTGGCTGACGGCACGGTACG ACCTCCCTGAACATGTTCCCCCTGGCTGACGGCACGGTACG < 41bp 1 0.124173960699879 1 0.13775622844696 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1793369 chr16:1793361 nonsynonymous SNV 0.978 2 13 hm5C_associated_SNPs_44043 0 0 8 CELF2 POSTAR2 GSE71264,GSM1831618 chr16:1793360-1793380
64251 chr7 129093125 129093125 1 + G A UCEC 129093106 + 129093086 129093126 41 ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTGC ATTCAGAGGTCGATGTGCTACACTGGTCCAGGTACAACTAC < 41bp 1 0.641858843028806 1 0.104128509759903 experiment 0.716282313942387 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093106 chr7:129093125 nonsynonymous SNV 1.000 2 40 hm5C_associated_SNPs_44044 0 0 2 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr2 39008767 39008767 1 + G T UCEC 39008755 + 39008735 39008775 41 GAAACTATGAATGAAGGGGACCATAGAGTGAGGGAGAAGCT GAAACTATGAATGAAGGGGACCATAGAGTGAGTGAGAAGCT < 41bp 1 0.248286092395057 1 0.0869268774986267 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008755 chr2:39008767 nonsynonymous SNV 0.193 0 33 hm5C_associated_SNPs_44045 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr2:39008706-39008771
64251 chr14 50088668 50088668 1 + T C UCEC 50088661 + 50088641 50088681 41 TTCGGCCATTATAGAGAGGCCAAATTCTCCCAGACCAAACA TTCGGCCATTATAGAGAGGCCAAATTCCCCCAGACCAAACA < 41bp 1 0.233896066063053 1 0.214555650949478 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088661 chr14:50088668 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_44048 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:50088635-50088686
64251 chr4 74308049 74308049 1 + G A UCEC 74308041 + 74308021 74308061 41 ATGAGATAGCAAGAAGGCATCCCTTCCTGTATGCACCTACA ATGAGATAGCAAGAAGGCATCCCTTCCTATATGCACCTACA < 41bp 1 0.0656978140241051 1 0.0741245448589325 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control AFP ENSG00000081051 CDS Human protein_coding chr4:74308041 chr4:74308049 synonymous SNV . 0 29 hm5C_associated_SNPs_44052 0 0 5 IGF2BP3 POSTAR2 ENCODE chr4:74308023-74308086
64251 chr1 24996769 24996769 1 + A T UCEC 24996751 + 24996731 24996771 41 ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAAAGG ACCGTCTACAAACTGGTCACCAGCTGTACCGGTCAAAATGG < 41bp 1 0.567751949578651 1 0.494387060403824 experiment 0.864496100842698 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRM1 ENSG00000133226 CDS Human protein_coding chr1:24996751 chr1:24996769 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_44055 0 0 1 TRA2A POSTAR2 ENCODE chr1:24996753-24996806
64251 chr5 134154671 134154671 1 + G A UCEC 134154670 + 134154650 134154690 41 AAGAACCCAAGGAAGGCGAGCGGAAGATTTACTTGGCAATT AAGAACCCAAGGAAGGCGAGCAGAAGATTTACTTGGCAATT < 41bp 1 0.573111907938028 1 0.760170936584473 experiment 0.853776184123943 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134154670 chr5:134154671 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_44056 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:134154658-134154687
64251 chr5 52096381 52096381 1 + C A UCEC 52096386 + 52096366 52096406 41 GGTACAGACAGAGTCCTCCACGGGCAGCGTGGGCAGCAACC GGTACAGACAGAGTCATCCACGGGCAGCGTGGGCAGCAACC < 41bp 1 0.701453914709273 1 0.462317109107971 experiment 0.597092170581454 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PELO ENSG00000152684 CDS Human protein_coding chr5:52096386 chr5:52096381 synonymous SNV . 0 16 hm5C_associated_SNPs_44057 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:52096366-52096386
64251 chr1 25679460 25679460 1 + C T UCEC 25679441 + 25679421 25679461 41 TGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGCT TGATTGCATCTATGTGGATTCTTTTTGGAGGTTATGTTGTT < 41bp 1 0.100702089221971 1 0.0288422703742981 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25679441 chr1:25679460 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_44061 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25679370-25679462
64251 chr20 57289028 57289028 1 + A C UCEC 57289032 + 57289012 57289052 41 AACAGCGCTGAGTGGGAGGCCGCCTGTGTGAAGGCGGGCAG AACAGCGCTGAGTGGGCGGCCGCCTGTGTGAAGGCGGGCAG < 41bp 1 0.754576834342239 1 0.597207188606262 experiment 0.490846331315521 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289032 chr20:57289028 nonsynonymous SNV 0.843 4 17 hm5C_associated_SNPs_44065 0 0 6 LSM11 POSTAR2 ENCODE chr20:57288995-57289064
64251 chr10 121436039 121436039 1 + C T UCEC 121436044 + 121436024 121436064 41 AAACCAGAAAGTAAGCCAGGCCCAGTTGGACCAGAACTCCC AAACCAGAAAGTAAGTCAGGCCCAGTTGGACCAGAACTCCC < 41bp 1 0.19471395225172 1 0.161921471357346 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436044 chr10:121436039 nonsynonymous SNV 1.000 0 16 hm5C_associated_SNPs_44067 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:121436018-121436068
64251 chr11 68705772 68705772 1 + T C UCEC 68705792 + 68705772 68705812 41 TTCTGCCAGCTCTGCAGCCGCCGCTACTGCCTCAGCCACCA CTCTGCCAGCTCTGCAGCCGCCGCTACTGCCTCAGCCACCA < 41bp 1 0.218295710593139 1 0.278259962797165 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68705792 chr11:68705772 nonsynonymous SNV 0.900 0 1 hm5C_associated_SNPs_44068 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:68705771-68705819
64251 chr20 37161462 37161462 1 + C T UCEC 37161476 + 37161456 37161496 41 GACTCCCGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAG GACTCCTGATAGTGAGAGACCTGCTCAAGCTCTCTTAAGAG < 41bp 1 0.280923229090452 1 0.578992962837219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37161476 chr20:37161462 synonymous SNV . 0 7 hm5C_associated_SNPs_44069 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:37161454-37161474
64251 chr7 819722 819722 1 + A G UCEC 819711 + 819691 819731 41 TCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGTT TCCTACTATCAGAGCAGTGTCCAGTACCTGTGCCGAGAGTT < 41bp 1 0.150901976168578 1 0.14024430513382 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAAF5 ENSG00000164818 CDS Human protein_coding chr7:819711 chr7:819722 nonsynonymous SNV 0.336 1 32 hm5C_associated_SNPs_44078 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:819697-819722
64251 chr2 162226622 162226622 1 + T C UCEC 162226642 + 162226622 162226662 41 TCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATG CCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATG < 41bp 1 0.517858019615982 1 0.239958316087723 experiment 0.964283960768037 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162226642 chr2:162226622 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_44079 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr2:162226615-162226656
64251 chr6 30860279 30860279 1 + G A UCEC 30860273 + 30860253 30860293 41 TTTCTGCAGTGCCGCTTCCTCTTTGCGGGGCCCTGGTTACT TTTCTGCAGTGCCGCTTCCTCTTTGCAGGGCCCTGGTTACT < 41bp 1 0.282674777932007 1 0.127789080142975 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30860273 chr6:30860279 synonymous SNV . 0 27 hm5C_associated_SNPs_44080 0 0 2 DDX24 POSTAR2 ENCODE chr6:30860278-30860320
64251 chr19 11105617 11105617 1 + G A UCEC 11105627 + 11105607 11105647 41 ATGCCAACACGGAGCGGGAGCAGAAGAAAGAGAACGAGCGG ATGCCAACACAGAGCGGGAGCAGAAGAAAGAGAACGAGCGG < 41bp 1 0.615512602926222 1 0.546581447124481 experiment 0.768974794147555 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11105627 chr19:11105617 synonymous SNV . 0 11 hm5C_associated_SNPs_44081 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:11105597-11105618
64251 chr1 109806906 109806906 1 + T C UCEC 109806891 + 109806871 109806911 41 AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCA AGAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGCCTGCA < 41bp 1 0.0480163516822035 1 0.0801582038402557 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806891 chr1:109806906 synonymous SNV . 0 36 hm5C_associated_SNPs_44086 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806906 109806906 1 + T C UCEC 109806892 + 109806872 109806912 41 GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCAC GAGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGCCTGCAC < 41bp 1 0.191195264568588 1 0.392038941383362 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806892 chr1:109806906 synonymous SNV . 0 35 hm5C_associated_SNPs_44087 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806906 109806906 1 + T C UCEC 109806893 + 109806873 109806913 41 AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACC AGCAGAGGGCAACCTGGGCCCCCGGCTGCATGGCCTGCACC < 41bp 1 0.261097880512903 1 0.255912303924561 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806893 chr1:109806906 synonymous SNV . 0 34 hm5C_associated_SNPs_44088 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806906 109806906 1 + T C UCEC 109806894 + 109806874 109806914 41 GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCT GCAGAGGGCAACCTGGGCCCCCGGCTGCATGGCCTGCACCT < 41bp 1 0.149675715221607 1 0.416567921638489 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806894 chr1:109806906 synonymous SNV . 0 33 hm5C_associated_SNPs_44089 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr1 109806906 109806906 1 + T C UCEC 109806895 + 109806875 109806915 41 CAGAGGGCAACCTGGGCCCCCGGCTGCATGGTCTGCACCTG CAGAGGGCAACCTGGGCCCCCGGCTGCATGGCCTGCACCTG < 41bp 1 0.255680015046276 1 0.598412752151489 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806895 chr1:109806906 synonymous SNV . 0 32 hm5C_associated_SNPs_44090 0 0 1 FMR1 POSTAR2 ENCODE chr1:109806867-109806910
64251 chr11 44092843 44092843 1 + G A UCEC 44092826 + 44092806 44092846 41 GGCATCATTAACTTGGGCACCAGTGAGAACAAACTCTGCTT GGCATCATTAACTTGGGCACCAGTGAGAACAAACTCTACTT < 41bp 1 0.36532982176205 1 0.503534078598022 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACCS ENSG00000110455 CDS Human protein_coding chr11:44092826 chr11:44092843 nonsynonymous SNV 0.996 4 38 hm5C_associated_SNPs_44093 0 0 4 BUD13 POSTAR2 ENCODE chr11:44092823-44092866
64251 chr21 46713505 46713505 1 + G A UCEC 46713488 + 46713468 46713508 41 TCTGGACTCATTGCGGAGTTCCACCCCTGCACGTTGCGGTT TCTGGACTCATTGCGGAGTTCCACCCCTGCACGTTGCAGTT < 41bp 1 0.0648929145843388 1 0.121328145265579 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC642852 ENSG00000223768 ncRNA_intronic Human lincRNA chr21:46713488 chr21:46713505 . . 0 38 hm5C_associated_SNPs_44096 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:46713500-46713520
64251 chr10 5791141 5791141 1 + C T UCEC 5791136 + 5791116 5791156 41 CTTACGTCCAAATCCGAGATCTCCACGGGATCCTCAGGACT CTTACGTCCAAATCCGAGATCTCCATGGGATCCTCAGGACT < 41bp 1 0.642422611466249 1 0.898550748825073 experiment 0.715154777067501 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM208B ENSG00000108021 CDS Human protein_coding chr10:5791136 chr10:5791141 synonymous SNV . 0 26 hm5C_associated_SNPs_44097 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:5791134-5791160
64251 chr6 110533354 110533354 1 + A G UCEC 110533371 + 110533351 110533391 41 ACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTT ACTGTCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTT < 41bp 1 0.758958264918017 1 0.728877067565918 experiment 0.482083470163966 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDC40 ENSG00000168438 CDS Human protein_coding chr6:110533371 chr6:110533354 nonsynonymous SNV 0.998 4 4 hm5C_associated_SNPs_44098 0 0 3 GRWD1 POSTAR2 ENCODE chr6:110533333-110533450
64251 chr2 192141645 192141645 1 + C A UCEC 192141649 + 192141629 192141669 41 AAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGA AAATGGAGGTGAAAACATCACTTCTGGACAATATGATTGGA < 41bp 1 0.24430667977223 1 0.179781019687653 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MYO1B ENSG00000128641 CDS Human protein_coding chr2:192141649 chr2:192141645 synonymous SNV . 0 17 hm5C_associated_SNPs_44099 0 0 1 GRWD1 POSTAR2 ENCODE chr2:192141642-192141755
64251 chr14 100996337 100996337 1 + G A UCEC 100996330 + 100996310 100996350 41 TATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTCCTG TATCACCCCGTGCTGCCCTCCGTCCTCACCACCTGCTCCTG < 41bp 1 0.188409644035678 1 0.789827942848206 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996330 chr14:100996337 nonsynonymous SNV 0.757 3 28 hm5C_associated_SNPs_44100 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr15 40756128 40756128 1 + C G UCEC 40756137 + 40756117 40756157 41 ACAATCCGAGTCCGGGACACCGTCCTTCTCAAATCAGGCCC ACAATCCGAGTGCGGGACACCGTCCTTCTCAAATCAGGCCC < 41bp 1 0.265265059576425 1 0.169497698545456 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756137 chr15:40756128 synonymous SNV . 0 12 hm5C_associated_SNPs_44101 0 0 1 FXR2 POSTAR2 ENCODE chr15:40756092-40756128
64251 chr19 30936299 30936299 1 + C T UCEC 30936308 + 30936288 30936328 41 TTTTTGTCACACGGGCTGAACCAGACTCTCGAGTATAACCT TTTTTGTCACATGGGCTGAACCAGACTCTCGAGTATAACCT < 41bp 1 0.281567589192759 1 0.0647166669368744 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936308 chr19:30936299 synonymous SNV . 0 12 hm5C_associated_SNPs_44102 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936273-30936300
64251 chr1 109804152 109804152 1 + G A UCEC 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTGCCACAAAGGAGCACGACGGGTTGCTGTTGTACAATGG < 41bp 1 0.299802543190308 1 0.31911426782608 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804152 nonsynonymous SNV 0.735 1 17 hm5C_associated_SNPs_44109 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr17 18832164 18832164 1 + C T UCEC 18832171 + 18832151 18832191 41 TTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATA TTTCTTGCTGCAGTAGAGACCCTGAAGGAAAGAGGTGCATA < 41bp 1 0.334884081333377 1 0.13500252366066 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18832171 chr17:18832164 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_44110 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:18832153-18832172
64251 chr18 60384429 60384429 1 + C T UCEC 60384441 + 60384421 60384461 41 TTGGGGAGCTGTGGAGGGTGCAGGAGGAAGGCATGGACTCG TTGGGGAGTTGTGGAGGGTGCAGGAGGAAGGCATGGACTCG < 41bp 1 0.789929735441772 1 0.758703768253326 experiment 0.420140529116456 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60384441 chr18:60384429 synonymous SNV . 0 9 hm5C_associated_SNPs_44111 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:60384393-60384431
64251 chr12 122517014 122517014 1 + G A UCEC 122517033 + 122517013 122517053 41 CGTCGCCGCACCGAGAGCACCCGCCCAAGAAGGGCTACGAT CATCGCCGCACCGAGAGCACCCGCCCAAGAAGGGCTACGAT < 41bp 1 0.0656502560375551 1 0.456039786338806 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122517033 chr12:122517014 synonymous SNV . 0 2 hm5C_associated_SNPs_44114 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:122517005-122517030
64251 chr2 171818208 171818208 1 + A C UCEC 171818210 + 171818190 171818230 41 TTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCC TTATTGCCACCACAAGTACACCAGTCCCTCACTTCTGTGCC < 41bp 1 0.20975812130745 1 0.0616903007030487 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control GORASP2 ENSG00000115806 CDS Human protein_coding chr2:171818210 chr2:171818208 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_44115 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:171818205-171818225
64251 chr12 95879657 95879657 1 + A G UCEC 95879655 + 95879635 95879675 41 GCTTTATTTGTATCTCACAGCAAAAGTTCAAACAGACCCTC GCTTTATTTGTATCTCACAGCAGAAGTTCAAACAGACCCTC < 41bp 1 0.688721574841233 1 0.51702892780304 experiment 0.622556850317534 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control METAP2 ENSG00000111142 CDS Human protein_coding chr12:95879655 chr12:95879657 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_44116 0 0 15 AGGF1 POSTAR2 ENCODE chr12:95879651-95879725
64251 chr1 24020374 24020374 1 + G A UCEC 24020369 + 24020349 24020389 41 CCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGG CCACTGCACAGTTCGAGGGGCCAAGACAGAAGAAATCTTGG < 41bp 1 0.0921933557782458 1 0.167239189147949 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020369 chr1:24020374 nonsynonymous SNV 0.999 2 26 hm5C_associated_SNPs_44117 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24020360-24020380
64251 chr1 24020374 24020374 1 + G A UCEC 24020370 + 24020350 24020390 41 CACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGA CACTGCACAGTTCGAGGGGCCAAGACAGAAGAAATCTTGGA < 41bp 1 0.712212621701679 1 0.215947598218918 experiment 0.575574756596642 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24020370 chr1:24020374 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_44118 0 0 45 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24020360-24020380
64251 chr17 18832162 18832162 1 + A G UCEC 18832171 + 18832151 18832191 41 TTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATA TTTCTTGCTGCGGCAGAGACCCTGAAGGAAAGAGGTGCATA < 41bp 1 0.414189159572279 1 0.186741501092911 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18832171 chr17:18832162 synonymous SNV . 0 12 hm5C_associated_SNPs_44119 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:18832153-18832172
64251 chrX 103434375 103434375 1 + C T UCEC 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTTAGTGGGCTCTTCCTTAACGAAGAGGTG < 41bp 1 0.260786989637397 1 0.084915429353714 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434375 synonymous SNV . 0 14 hm5C_associated_SNPs_44120 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:103434363-103434389
64251 chr2 223782820 223782820 1 + A G UCEC 223782831 + 223782811 223782851 41 TTAAATGAAACAGAGGTGACCAACATCATTACTAGTAAAGA TTAAATGAAGCAGAGGTGACCAACATCATTACTAGTAAAGA < 41bp 1 0.544716357704648 1 0.349731117486954 experiment 0.910567284590704 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACSL3 ENSG00000123983 CDS Human protein_coding chr2:223782831 chr2:223782820 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_44121 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:223782800-223782820
64251 chr11 67069690 67069690 1 + C T UCEC 67069687 + 67069667 67069707 41 GTCCACCCAGCTTTGAAGAGCAGCTGCGCCTGGCCCTGGAG GTCCACCCAGCTTTGAAGAGCAGTTGCGCCTGGCCCTGGAG < 41bp 1 0.293013507163966 1 0.184866517782211 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKRD13D ENSG00000172932 CDS Human protein_coding chr11:67069687 chr11:67069690 synonymous SNV . 0 24 hm5C_associated_SNPs_44124 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:67069673-67069711
64251 chr9 96398789 96398789 1 + G A UCEC 96398804 + 96398784 96398824 41 GCTGCGGAGCCGGACCTTTCCCAGGTGGGCTGGCCTTCCTG GCTGCAGAGCCGGACCTTTCCCAGGTGGGCTGGCCTTCCTG < 41bp 1 0.779367287361645 1 0.670729994773865 experiment 0.44126542527671 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96398804 chr9:96398789 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_44125 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:96398759-96398796
64251 chr5 17275532 17275532 1 + G T UCEC 17275552 + 17275532 17275572 41 GGAGGGCGAGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCC TGAGGGCGAGAAGGACGCGGCGGCTGCCAAGGAGGAGGCCC < 41bp 1 0.771698738030211 1 0.464915215969086 experiment 0.456602523939577 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control BASP1 ENSG00000176788 CDS Human protein_coding chr5:17275552 chr5:17275532 nonsynonymous SNV 0.853 3 1 hm5C_associated_SNPs_44127 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:17275520-17275540
64251 chr1 44684007 44684007 1 + G A UCEC 44684019 + 44683999 44684039 41 TGTACTCGGAGCAGGAGTACCAGCTTTATCTCCACGATGAT TGTACTCGAAGCAGGAGTACCAGCTTTATCTCCACGATGAT < 41bp 1 0.477515328580362 1 0.280862033367157 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684019 chr1:44684007 nonsynonymous SNV 0.998 1 9 hm5C_associated_SNPs_44128 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44683983-44684008
64251 chr11 93494812 93494812 1 + C T UCEC 93494810 + 93494790 93494830 41 TACCTGCAGAGTTTCTCTATCGCATTGATCAACCAAAAGAG TACCTGCAGAGTTTCTCTATCGTATTGATCAACCAAAAGAG < 41bp 1 0.282543701360009 1 0.0798113644123077 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93494810 chr11:93494812 synonymous SNV . 0 23 hm5C_associated_SNPs_44129 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:93494812-93494813
64251 chr17 81042988 81042988 1 + G A UCEC 81042993 + 81042973 81043013 41 CTTCACGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAA CTTCACGGACTCCTCAGGGGCCAATATTTATTTGGAAAAAA < 41bp 1 0.037011652967458 1 0.0403677523136139 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control METRNL ENSG00000176845 CDS Human protein_coding chr17:81042993 chr17:81042988 synonymous SNV . 0 16 hm5C_associated_SNPs_44130 0 0 1 DDX3X POSTAR2 ENCODE chr17:81042885-81043006
64251 chr1 201828077 201828077 1 + C T UCEC 201828085 + 201828065 201828105 41 CATTTTGACATGCATGGGTTCCTGACCAATGTCATCCTTGC CATTTTGACATGTATGGGTTCCTGACCAATGTCATCCTTGC < 41bp 1 0.135166809667936 1 0.0448461174964905 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IPO9 ENSG00000198700 CDS Human protein_coding chr1:201828085 chr1:201828077 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_44132 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:201828060-201828080
64251 chr2 99156101 99156101 1 + C T UCEC 99156084 + 99156064 99156104 41 GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGT GATGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGTAGT < 41bp 1 0.320154356599141 1 0.680331885814667 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156084 chr2:99156101 stopgain 1.000 1 38 hm5C_associated_SNPs_44133 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chrX 48759681 48759681 1 + G A UCEC 48759667 + 48759647 48759687 41 CGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACAG CGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCAAGACAG < 41bp 1 0.78383943972071 1 0.624300122261047 experiment 0.432321120558579 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759667 chrX:48759681 nonsynonymous SNV 0.991 1 35 hm5C_associated_SNPs_44134 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48759667-48759715
64251 chr17 49239101 49239101 1 + T C UCEC 49239099 + 49239079 49239119 41 CTCCACCCAGGAACATTATACATGGCAGTGATTCTGTGGAG CTCCACCCAGGAACATTATACACGGCAGTGATTCTGTGGAG < 41bp 1 0.708776803381951 1 0.126713573932648 experiment 0.582446393236098 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239099 chr17:49239101 synonymous SNV . 0 23 hm5C_associated_SNPs_44135 0 0 37 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:49239080-49239120
64251 chr17 49239101 49239101 1 + T C UCEC 49239112 + 49239092 49239132 41 CATTATACATGGCAGTGATTCTGTGGAGAGTGCAGAGAAGG CATTATACACGGCAGTGATTCTGTGGAGAGTGCAGAGAAGG < 41bp 1 0.437456297905639 1 0.45100063085556 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NME1 ENSG00000239672 CDS Human protein_coding chr17:49239112 chr17:49239101 synonymous SNV . 0 10 hm5C_associated_SNPs_44136 0 0 37 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:49239080-49239120
64251 chr1 32647152 32647152 1 + A C UCEC 32647149 + 32647129 32647169 41 AGACCGAGACCATCGAAGGCCACAGGAGAAGAAAAAAGCCA AGACCGAGACCATCGAAGGCCACCGGAGAAGAAAAAAGCCA < 41bp 1 0.493652530655883 1 0.4496990442276 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXLNA ENSG00000084652 CDS Human protein_coding chr1:32647149 chr1:32647152 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_44137 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32647100-32647156
64251 chr6 27101067 27101067 1 + G A UCEC 27101054 + 27101034 27101074 41 GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCGACAACAA GAGATCCTGGAACTGGCGGGCAACGCGGCCCGCAACAACAA < 41bp 1 0.519958751699383 1 0.55085277557373 experiment 0.960082496601234 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101054 chr6:27101067 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_44138 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101067 27101067 1 + G A UCEC 27101062 + 27101042 27101082 41 GGAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCC GGAACTGGCGGGCAACGCGGCCCGCAACAACAAGAAGACCC < 41bp 1 0.274334847992883 1 0.256435930728912 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101062 chr6:27101067 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_44139 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101067 27101067 1 + G A UCEC 27101063 + 27101043 27101083 41 GAACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCG GAACTGGCGGGCAACGCGGCCCGCAACAACAAGAAGACCCG < 41bp 1 0.542168421313762 1 0.145419716835022 experiment 0.915663157372476 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101063 chr6:27101067 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_44140 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101067 27101067 1 + G A UCEC 27101064 + 27101044 27101084 41 AACTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGC AACTGGCGGGCAACGCGGCCCGCAACAACAAGAAGACCCGC < 41bp 1 0.756645991464436 1 0.355178594589233 experiment 0.486708017071128 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101064 chr6:27101067 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_44141 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chr6 27101067 27101067 1 + G A UCEC 27101066 + 27101046 27101086 41 CTGGCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCAT CTGGCGGGCAACGCGGCCCGCAACAACAAGAAGACCCGCAT < 41bp 1 0.764883118289377 1 0.47050666809082 experiment 0.470233763421245 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101066 chr6:27101067 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_44142 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:27101001-27101070
64251 chrX 150156295 150156295 1 + G C UCEC 150156311 + 150156291 150156331 41 AAAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG AAAGCGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG < 41bp 1 0.450650123550599 1 0.186369061470032 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156311 chrX:150156295 nonsynonymous SNV 0.961 1 5 hm5C_associated_SNPs_44143 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:150156267-150156301
64251 chrX 150156295 150156295 1 + G C UCEC 150156312 + 150156292 150156332 41 AAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA AAGCGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA < 41bp 1 0.669190708124834 1 0.536859273910522 experiment 0.661618583750332 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156312 chrX:150156295 nonsynonymous SNV 0.961 1 4 hm5C_associated_SNPs_44144 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:150156267-150156301
64251 chrX 150156295 150156295 1 + G C UCEC 150156313 + 150156293 150156333 41 AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA AGCGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA < 41bp 1 0.675715835805387 1 0.74322247505188 experiment 0.648568328389226 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156313 chrX:150156295 nonsynonymous SNV 0.961 1 3 hm5C_associated_SNPs_44145 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:150156267-150156301
64251 chr14 73550246 73550246 1 + C T UCEC 73550235 + 73550215 73550255 41 TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCCGGAAAGCTT TTTTGAGCTGGAAGAGAGTACAAGGTGCTTCTGGAAAGCTT < 41bp 1 0.58986860803369 1 0.538762092590332 experiment 0.820262783932621 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73550235 chr14:73550246 synonymous SNV . 0 32 hm5C_associated_SNPs_44146 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:73550245-73550266
64251 chr2 157407222 157407222 1 + G A UCEC 157407233 + 157407213 157407253 41 GCCAGCCAAGTGCTGGTGTCCATATTGTGATGCCTGGTTAT GCCAGCCAAATGCTGGTGTCCATATTGTGATGCCTGGTTAT < 41bp 1 0.136239676333214 1 0.0697313249111176 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407233 chr2:157407222 nonsynonymous SNV 0.486 3 10 hm5C_associated_SNPs_44147 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157407206-157407230
64251 chr11 44129667 44129667 1 + G A UCEC 44129673 + 44129653 44129693 41 AATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACAC AATGAACTGCTCATAGCCATCTCAGACAGTGACTACTACAC < 41bp 1 0.581364892233061 1 0.187041461467743 experiment 0.837270215533877 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129673 chr11:44129667 nonsynonymous SNV 0.194 2 15 hm5C_associated_SNPs_44148 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:44129636-44129674
64251 chr1 32502590 32502590 1 + G A UCEC 32502589 + 32502569 32502609 41 TACCTGAACCCTCTCGTGGACGTGGGGTGCCAGTGAGAGGC TACCTGAACCCTCTCGTGGACATGGGGTGCCAGTGAGAGGC < 41bp 1 0.741570632930338 1 0.388568639755249 experiment 0.516858734139324 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502589 chr1:32502590 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_44149 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32502539-32502590
64251 chr1 32502590 32502590 1 + G A UCEC 32502598 + 32502578 32502618 41 CCTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCT CCTCTCGTGGACATGGGGTGCCAGTGAGAGGCCGGGGAGCT < 41bp 1 0.494058391323095 1 0.47748139500618 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502598 chr1:32502590 nonsynonymous SNV 0.999 2 13 hm5C_associated_SNPs_44150 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32502539-32502590
64251 chr1 32502590 32502590 1 + G A UCEC 32502599 + 32502579 32502619 41 CTCTCGTGGACGTGGGGTGCCAGTGAGAGGCCGGGGAGCTG CTCTCGTGGACATGGGGTGCCAGTGAGAGGCCGGGGAGCTG < 41bp 1 0.728564420444825 1 0.254807651042938 experiment 0.54287115911035 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502599 chr1:32502590 nonsynonymous SNV 0.999 2 12 hm5C_associated_SNPs_44151 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32502539-32502590
64251 chr3 49568961 49568961 1 + G T UCEC 49568966 + 49568946 49568986 41 CCCATCCAGGATCGTGCCAACCCCCACATCTCCAGCCATTG CCCATCCAGGATCGTTCCAACCCCCACATCTCCAGCCATTG < 41bp 1 0.145972117092759 1 0.0347837805747986 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568966 chr3:49568961 synonymous SNV . 0 16 hm5C_associated_SNPs_44152 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:49568960-49568980
64251 chr12 69965990 69965990 1 + T C UCEC 69966003 + 69965983 69966023 41 ACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGG ACATCCTCCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGG < 41bp 1 0.428447144871681 1 0.223352640867233 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FRS2 ENSG00000166225 CDS Human protein_coding chr12:69966003 chr12:69965990 nonsynonymous SNV 0.995 4 8 hm5C_associated_SNPs_44153 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:69965984-69966006
64251 chr11 14865497 14865497 1 + C T UCEC 14865490 + 14865470 14865510 41 TCCTGCATTAGAATTGATGGCTCTATACGTGGCAGCTGCCA TCCTGCATTAGAATTGATGGCTCTATATGTGGCAGCTGCCA < 41bp 1 0.410920183837871 1 0.863337576389313 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14865490 chr11:14865497 synonymous SNV . 0 28 hm5C_associated_SNPs_44154 0 0 2 GRWD1 POSTAR2 ENCODE chr11:14865417-14865522
64251 chr5 154174839 154174839 1 + G T UCEC 154174837 + 154174817 154174857 41 ACCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCAC ACCCTTATTGCTTCCTTCCACCTAGTGCAGGCCCTTACCAC < 41bp 1 0.108052418662394 1 0.0602322816848755 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174837 chr5:154174839 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_44156 0 0 16 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:154174820-154174840
64251 chr5 154174839 154174839 1 + G T UCEC 154174838 + 154174818 154174858 41 CCCTTATTGCTTCCTTCCACCGAGTGCAGGCCCTTACCACT CCCTTATTGCTTCCTTCCACCTAGTGCAGGCCCTTACCACT < 41bp 1 0.337744708025983 1 0.668883919715881 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154174838 chr5:154174839 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_44157 0 0 16 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:154174820-154174840
64251 chr1 161751789 161751789 1 + G T UCEC 161751776 + 161751756 161751796 41 GACATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA GACATTTGGGACATCAACAACCAAATCTGTACATGTAATTA < 41bp 1 0.171904500255024 1 0.104089349508286 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751776 chr1:161751789 nonsynonymous SNV 0.996 0 34 hm5C_associated_SNPs_44158 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:161751765-161751789
64251 chrX 73046589 73046589 1 - C A UCEC 73046585 - 73046565 73046605 41 TACCTAGATGGATAGAGGACCCAAGCGAAAAAGGTATCTCA TACCTAGATGGATAGATGACCCAAGCGAAAAAGGTATCTCA < 41bp 1 0.10650677162071 1 0.245333135128021 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046585 chrX:73046589 . . 0 17 hm5C_associated_SNPs_44159 0 0 63 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chrX 73046589 73046589 1 - C A UCEC 73046606 - 73046586 73046626 41 GAAGGCCCCTGTCACAAAGCCTACCTAGATGGATAGAGGAC GAAGGCCCCTGTCACAAAGCCTACCTAGATGGATAGATGAC < 41bp 1 0.0923852401384065 1 0.0684517920017242 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046606 chrX:73046589 . . 0 38 hm5C_associated_SNPs_44160 0 0 63 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr9 80943003 80943003 1 + T C UCEC 80942983 + 80942963 80943003 41 TCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAT TCAGTTGTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAAC < 41bp 1 0.462292650838077 1 0.423964202404022 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80942983 chr9:80943003 synonymous SNV . 0 41 hm5C_associated_SNPs_44161 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:80942930-80943008
64251 chr9 134382793 134382793 1 + C T UCEC 134382812 + 134382792 134382832 41 GCTGCCAGCACTCGCGGGGGCCTTGTCGGTCCCCATGGCCT GTTGCCAGCACTCGCGGGGGCCTTGTCGGTCCCCATGGCCT < 41bp 1 0.0537112585174522 1 0.0347888171672821 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control POMT1 ENSG00000130714 CDS Human protein_coding chr9:134382812 chr9:134382793 synonymous SNV . 0 2 hm5C_associated_SNPs_44162 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:134382766-134382796
64251 chr21 30701832 30701832 1 + C T UCEC 30701844 + 30701824 30701864 41 ATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAG ATGCACAATGGATAATTTCACTGTCTCGAAATGATTTTCAG < 41bp 1 0.184262556606321 1 0.131155163049698 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient BACH1 ENSG00000156273 CDS Human protein_coding chr21:30701844 chr21:30701832 nonsynonymous SNV 0.998 2 9 hm5C_associated_SNPs_44164 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30701820-30701840
64251 chrX 24545705 24545705 1 + G A UCEC 24545707 + 24545687 24545727 41 TTAGAACTCAATGAGAGCGACAGTTGAACTCTATGAAGACA TTAGAACTCAATGAGAGCAACAGTTGAACTCTATGAAGACA < 41bp 1 0.0706186930007436 1 0.384961664676666 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PDK3 ENSG00000067992 CDS Human protein_coding chrX:24545707 chrX:24545705 synonymous SNV . 0 19 hm5C_associated_SNPs_44165 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:24545689-24545725
64251 chr3 113786895 113786895 1 + T C UCEC 113786877 + 113786857 113786897 41 TGCTCCCTGCACGATCCAGTCAGCCCCTGCCCGGCTGGTTA TGCTCCCTGCACGATCCAGTCAGCCCCTGCCCGGCTGGCTA < 41bp 1 0.527846892370175 1 0.607407033443451 experiment 0.944306215259651 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113786877 chr3:113786895 synonymous SNV . 0 39 hm5C_associated_SNPs_44166 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:113786868-113786904
64251 chr5 137756527 137756527 1 + C T UCEC 137756528 + 137756508 137756548 41 CTGTTGCTGGGTCCCACTGCCTCCAACAACAAAACCGAAGG CTGTTGCTGGGTCCCACTGTCTCCAACAACAAAACCGAAGG < 41bp 1 0.728532932879604 1 0.969380021095276 experiment 0.542934134240792 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient KDM3B ENSG00000120733 CDS Human protein_coding chr5:137756528 chr5:137756527 nonsynonymous SNV 1.000 1 20 hm5C_associated_SNPs_44167 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:137756518-137756544
64251 chr19 11141524 11141524 1 + G A UCEC 11141506 + 11141486 11141526 41 AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCGGC AGCACCCGGGCTGGGGGGCTCGGCCTGAACCTCCAGTCAGC < 41bp 1 0.442138900497515 1 0.695037364959717 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141506 chr19:11141524 synonymous SNV . 0 39 hm5C_associated_SNPs_44169 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr19:11141512-11141557
64251 chr19 40718779 40718779 1 + C T UCEC 40718786 + 40718766 40718806 41 GGACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTG GGACATGGAGCCGTGGTGGGCCCCCAAAGAAGGAAGAACTG < 41bp 1 0.0629099403730065 1 0.141393512487411 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718786 chr19:40718779 synonymous SNV . 0 14 hm5C_associated_SNPs_44170 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718779 40718779 1 + C T UCEC 40718787 + 40718767 40718807 41 GACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGG GACATGGAGCCGTGGTGGGCCCCCAAAGAAGGAAGAACTGG < 41bp 1 0.203706256821908 1 0.382641524076462 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718787 chr19:40718779 synonymous SNV . 0 13 hm5C_associated_SNPs_44171 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718779 40718779 1 + C T UCEC 40718788 + 40718768 40718808 41 ACATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGT ACATGGAGCCGTGGTGGGCCCCCAAAGAAGGAAGAACTGGT < 41bp 1 0.188178941958765 1 0.558956146240234 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718788 chr19:40718779 synonymous SNV . 0 12 hm5C_associated_SNPs_44172 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718779 40718779 1 + C T UCEC 40718789 + 40718769 40718809 41 CATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTC CATGGAGCCGTGGTGGGCCCCCAAAGAAGGAAGAACTGGTC < 41bp 1 0.198471904576981 1 0.698400437831879 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718789 chr19:40718779 synonymous SNV . 0 11 hm5C_associated_SNPs_44173 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr19 40718779 40718779 1 + C T UCEC 40718790 + 40718770 40718810 41 ATGGAGCCGCGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG ATGGAGCCGTGGTGGGCCCCCAAAGAAGGAAGAACTGGTCG < 41bp 1 0.341266576050732 1 0.774573743343353 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAP3K10 ENSG00000130758 CDS Human protein_coding chr19:40718790 chr19:40718779 synonymous SNV . 0 10 hm5C_associated_SNPs_44174 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40718769-40718794
64251 chr6 133137664 133137664 1 + G A UCEC 133137682 + 133137662 133137702 41 TGGAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAG TGAAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAG < 41bp 1 0.788058361990758 1 0.072683721780777 experiment 0.423883276018485 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133137682 chr6:133137664 nonsynonymous SNV 0.999 1 3 hm5C_associated_SNPs_44175 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137660-133137680
64251 chr6 133137664 133137664 1 + G A UCEC 133137684 + 133137664 133137704 41 GAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGT AAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGT < 41bp 1 0.470268680126166 1 0.396497160196304 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133137684 chr6:133137664 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_44176 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137660-133137680
64251 chr19 46509884 46509884 1 + T C UCEC 46509891 + 46509871 46509911 41 CGGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCC CGGAACCGCAAGACGGGGGGCCGCCCAGGCTCCTTGGCCCC < 41bp 1 0.107275902153077 1 0.111608356237411 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509891 chr19:46509884 nonsynonymous SNV 0.998 1 14 hm5C_associated_SNPs_44178 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr19 46509884 46509884 1 + T C UCEC 46509892 + 46509872 46509912 41 GGAACCGCAAGATGGGGGGCCGCCCAGGCTCCTTGGCCCCC GGAACCGCAAGACGGGGGGCCGCCCAGGCTCCTTGGCCCCC < 41bp 1 0.271064158183612 1 0.0901864767074585 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CCDC61 ENSG00000104983 CDS Human protein_coding chr19:46509892 chr19:46509884 nonsynonymous SNV 0.998 1 13 hm5C_associated_SNPs_44179 0 0 1 DDX24 POSTAR2 ENCODE chr19:46509841-46509889
64251 chr16 675478 675478 1 + G T UCEC 675485 + 675465 675505 41 TGGTCCTTTGACGGCATCGACCGCTGGATCAAGGAGATCGA TGGTCCTTTGACGTCATCGACCGCTGGATCAAGGAGATCGA < 41bp 1 0.164783960950659 1 0.080287367105484 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C ENSG00000197562 CDS Human protein_coding chr16:675485 chr16:675478 nonsynonymous SNV 0.992 4 14 hm5C_associated_SNPs_44180 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:675472-675491
64251 chr3 126741023 126741023 1 + G T UCEC 126741032 + 126741012 126741052 41 CTGGAGGCACAGCGCAGCTTCTCCATGCGCGACCGCGGGAA CTGGAGGCACATCGCAGCTTCTCCATGCGCGACCGCGGGAA < 41bp 1 0.594309488966165 1 0.967249751091003 experiment 0.811381022067671 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126741032 chr3:126741023 nonsynonymous SNV 0.920 4 12 hm5C_associated_SNPs_44181 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:126741015-126741050
64251 chrX 105891600 105891600 1 + G A UCEC 105891593 + 105891573 105891613 41 ACAAACAAAGGGAATTAAACCGGGCATGCCAAGCATCTTCA ACAAACAAAGGGAATTAAACCGGGCATACCAAGCATCTTCA < 41bp 1 0.689037681505715 1 0.717086255550385 experiment 0.62192463698857 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105891593 chrX:105891600 nonsynonymous SNV 0.000 0 28 hm5C_associated_SNPs_44182 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:105891596-105891617
64251 chr12 57619018 57619018 1 + T C UCEC 57619032 + 57619012 57619052 41 AGTGTGTATTTCCGCCACAACTCGTCCAGCCTGGGCAACCT AGTGTGCATTTCCGCCACAACTCGTCCAGCCTGGGCAACCT < 41bp 1 0.609679157043306 1 0.24118384718895 experiment 0.780641685913389 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619032 chr12:57619018 nonsynonymous SNV 0.999 1 7 hm5C_associated_SNPs_44185 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr12:57618999-57619025
64251 chr2 189458726 189458726 1 + C T UCEC 189458714 + 189458694 189458734 41 GAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGTG GAAGGCACAGTATTTTGTCTCGACCCGTTAGATAGTAGGTG < 41bp 1 0.309531369723455 1 0.0986729264259338 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GULP1 ENSG00000144366 CDS Human protein_coding chr2:189458714 chr2:189458726 synonymous SNV . 0 33 hm5C_associated_SNPs_44186 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:189458706-189458742
64251 chr22 44330494 44330494 1 + A T UCEC 44330489 + 44330469 44330509 41 GCTTGCTTTGCTCACAGGTGCTGGGAGAGATATGCCTTCGA GCTTGCTTTGCTCACAGGTGCTGGGTGAGATATGCCTTCGA < 41bp 1 0.724358532041461 1 0.734167516231537 experiment 0.551282935917078 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44330489 chr22:44330494 synonymous SNV . 0 26 hm5C_associated_SNPs_44187 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:44330467-44330510
64251 chr6 36569550 36569550 1 + G A UCEC 36569553 + 36569533 36569573 41 AAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGGT AAATCACAAGCCGTCCCAATCCTTCTCTAGGTCTCGTAGGT < 41bp 1 0.0358536386477031 1 0.0797218680381775 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36569553 chr6:36569550 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_44188 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36569539-36569575
64251 chr19 42880589 42880589 1 + C T UCEC 42880609 + 42880589 42880629 41 CCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACCCAT TCCCTGCTGCTGACAGGGGCCGGTGGGCCCTGGGGACCCAT < 41bp 1 0.243812093478886 1 0.786110639572144 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42880609 chr19:42880589 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_44191 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:42880566-42880597
64251 chr2 102486868 102486868 1 + C T UCEC 102486859 + 102486839 102486879 41 ATGACCCCATCCAAGGAGGGCACTCTAATCGTCCGCCAGGT ATGACCCCATCCAAGGAGGGCACTCTAATTGTCCGCCAGGT < 41bp 1 0.0843531278343048 1 0.0860275626182556 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486859 chr2:102486868 synonymous SNV . 0 30 hm5C_associated_SNPs_44192 0 0 5 CELF2 POSTAR2 GSE71264,GSM1831620 chr2:102486860-102486880
64251 chr17 21731034 21731034 1 + C T UCEC 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAAGAAGGCATTCCCCCCGACCAGCAGAGGCTCATCTT < 41bp 1 0.278191986847329 1 0.362528622150421 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731034 synonymous SNV . 0 15 hm5C_associated_SNPs_44193 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr2 74326586 74326586 1 + C T UCEC 74326589 + 74326569 74326609 41 TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC TCCCCCGCGAGGTCCGATGCCTGCCCGAGCCTGCCAAGTCC < 41bp 1 0.38852220098376 1 0.0396896302700043 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74326589 chr2:74326586 nonsynonymous SNV 0.997 3 18 hm5C_associated_SNPs_44199 0 0 1 BUD13 POSTAR2 ENCODE chr2:74326575-74326602
64251 chr3 127323800 127323800 1 + G A UCEC 127323809 + 127323789 127323829 41 GAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT GAGCGGGCCACAGAGGACGGCGAGGAGGACGAGGAGATGAT < 41bp 1 0.60136126500799 1 0.497272074222565 experiment 0.79727746998402 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323809 chr3:127323800 synonymous SNV . 0 12 hm5C_associated_SNPs_44200 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127323776-127323800
64251 chr2 114670799 114670799 1 + C A UCEC 114670803 + 114670783 114670823 41 CCACAGTTTATCATCCCTTCCTGTAAGTATTTCTTTTAAGC CCACAGTTTATCATCCATTCCTGTAAGTATTTCTTTTAAGC < 41bp 1 0.453511775391614 1 0.191579759120941 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114670803 chr2:114670799 nonsynonymous SNV 0.997 5 17 hm5C_associated_SNPs_44202 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:114670752-114670801
64251 chr20 39744056 39744056 1 + G A UCEC 39744076 + 39744056 39744096 41 GATGATCTTTTTGATAGACTCAATGTGAGTAGATGAAGCAC AATGATCTTTTTGATAGACTCAATGTGAGTAGATGAAGCAC < 41bp 1 0.455554619912885 1 0.351229667663574 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TOP1 ENSG00000198900 CDS Human protein_coding chr20:39744076 chr20:39744056 nonsynonymous SNV 0.999 4 1 hm5C_associated_SNPs_44203 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39744017-39744068
64251 chr1 183519959 183519959 1 + C T UCEC 183519963 + 183519943 183519983 41 GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC GCTCTCCTCCAACACATAACCATAATTCTGTTCCATTCTCC < 41bp 1 0.426368274218401 1 0.200506836175919 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519963 chr1:183519959 synonymous SNV . 0 17 hm5C_associated_SNPs_44211 0 0 18 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr17 25904587 25904587 1 + C T UCEC 25904584 + 25904564 25904604 41 AGGCCAAGGTGAAGGAGACGCTGCGGCGCTGTGGGGCCAGC AGGCCAAGGTGAAGGAGACGCTGTGGCGCTGTGGGGCCAGC < 41bp 1 0.583780391112606 1 0.119805932044983 experiment 0.832439217774789 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KSR1 ENSG00000141068 CDS Human protein_coding chr17:25904584 chr17:25904587 nonsynonymous SNV 0.920 3 24 hm5C_associated_SNPs_44212 0 0 8 BUD13 POSTAR2 ENCODE chr17:25904586-25904663
64251 chr9 88622365 88622365 1 + G A UCEC 88622373 + 88622353 88622393 41 TGTCAGTCCTCCGGTGCTTTCCCCCAAGTAAGTATTGTAAG TGTCAGTCCTCCAGTGCTTTCCCCCAAGTAAGTATTGTAAG < 41bp 1 0.173196751997546 1 0.15947750210762 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA35 ENSG00000135040 CDS Human protein_coding chr9:88622373 chr9:88622365 synonymous SNV . 0 13 hm5C_associated_SNPs_44214 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr9:88622356-88622369
64251 chr9 88622365 88622365 1 + G A UCEC 88622374 + 88622354 88622394 41 GTCAGTCCTCCGGTGCTTTCCCCCAAGTAAGTATTGTAAGA GTCAGTCCTCCAGTGCTTTCCCCCAAGTAAGTATTGTAAGA < 41bp 1 0.50308992282669 1 0.623987793922424 experiment 0.99382015434662 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAA35 ENSG00000135040 CDS Human protein_coding chr9:88622374 chr9:88622365 synonymous SNV . 0 12 hm5C_associated_SNPs_44215 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr9:88622356-88622369
64251 chr17 48631743 48631743 1 + C T UCEC 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGTGTCG < 41bp 1 0.036316977847622 1 0.0146062076091766 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631743 nonsynonymous SNV 0.973 1 37 hm5C_associated_SNPs_44216 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr13 61034626 61034626 1 + G A UCEC 61034613 + 61034593 61034633 41 CACCAAGGATGCTGCGATTACAGATGACTGATGGTCATATA CACCAAGGATGCTGCGATTACAGATGACTGATGATCATATA < 41bp 1 0.665632408707629 1 0.581136226654053 experiment 0.668735182584743 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034613 chr13:61034626 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_44217 0 0 1 BUD13 POSTAR2 ENCODE chr13:61034561-61034638
64251 chr11 62545489 62545489 1 + C T UCEC 62545497 + 62545477 62545517 41 GCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTT GCACTGCCCATGTGCCCCGCCAGGGAGGGTGAACTCTACTT < 41bp 1 0.75670783939054 1 0.790934562683105 experiment 0.48658432121892 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF6L ENSG00000162227 CDS Human protein_coding chr11:62545497 chr11:62545489 nonsynonymous SNV 0.987 2 13 hm5C_associated_SNPs_44218 0 0 1 PPIG POSTAR2 ENCODE chr11:62545473-62545512
64251 chr19 18053594 18053594 1 + C T UCEC 18053574 + 18053554 18053594 41 CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCC CGGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCT < 41bp 1 0.334263601928762 1 0.0779215693473816 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053574 chr19:18053594 nonsynonymous SNV 0.162 2 41 hm5C_associated_SNPs_44224 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:18053580-18053600
64251 chr19 18053594 18053594 1 + C T UCEC 18053575 + 18053555 18053595 41 GGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCCG GGCAAGGCGCCGCGGGTGGCCACGTCCAGCAAGGTCACCTG < 41bp 1 0.758936692506223 1 0.674325227737427 experiment 0.482126614987554 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18053575 chr19:18053594 nonsynonymous SNV 0.162 2 40 hm5C_associated_SNPs_44225 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr19:18053580-18053600
64251 chr11 9463666 9463666 1 + A G UCEC 9463671 + 9463651 9463691 41 TGGTATCAGGCACTGACTCACGGTCTTAATGAAGAACAAAG TGGTATCAGGCACTGGCTCACGGTCTTAATGAAGAACAAAG < 41bp 1 0.223746616607579 1 0.21760630607605 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9463671 chr11:9463666 nonsynonymous SNV 0.994 2 16 hm5C_associated_SNPs_44226 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:9463628-9463666
64251 chr2 10560065 10560065 1 + C T UCEC 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTCTTCCCCTACGGCGACGTTTCCAA < 41bp 1 0.09841662715927 1 0.133738547563553 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560065 nonsynonymous SNV 0.994 2 35 hm5C_associated_SNPs_44227 0 0 1 METAP2 POSTAR2 ENCODE chr2:10560056-10560107
64251 chr16 842536 842536 1 + G A UCEC 842525 + 842505 842545 41 CCGGCTGTGCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGA CCGGCTGTGCCTTCGGGAGGCGGCCGACGGCACCGGGCAGA < 41bp 1 0.522830704244051 1 0.592785477638245 experiment 0.954338591511898 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842525 chr16:842536 nonsynonymous SNV 0.001 0 32 hm5C_associated_SNPs_44228 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr11 4156353 4156353 1 + A C UCEC 4156342 + 4156322 4156362 41 AAATTCCTGATGACCTGAAGCAACTTTATAAAACTGTGTGG AAATTCCTGATGACCTGAAGCAACTTTATAACACTGTGTGG < 41bp 1 0.30827176681258 1 0.215743660926819 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4156342 chr11:4156353 nonsynonymous SNV 0.999 4 32 hm5C_associated_SNPs_44231 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4156316-4156418
64251 chrX 117815667 117815667 1 + G A UCEC 117815659 + 117815639 117815679 41 TCTTCTATTGTGATATAGGTCAATGCTGGTCCATTAGCATA TCTTCTATTGTGATATAGGTCAATGCTGATCCATTAGCATA < 41bp 1 0.160302048947234 1 0.0500192940235138 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DOCK11 ENSG00000147251 CDS Human protein_coding chrX:117815659 chrX:117815667 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_44232 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:117815661-117815688
64251 chr14 105716516 105716516 1 + G A UCEC 105716527 + 105716507 105716547 41 ACAAGCCCCGCCTGGACTTTCCCCTGACCAAGAGGAAGGGC ACAAGCCCCACCTGGACTTTCCCCTGACCAAGAGGAAGGGC < 41bp 1 0.285747358978121 1 0.0497926473617554 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716527 chr14:105716516 nonsynonymous SNV 0.990 0 10 hm5C_associated_SNPs_44235 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:105716500-105716531
64251 chr11 123988384 123988384 1 + G A UCEC 123988382 + 123988362 123988402 41 ACTCTGGTCTATCTCCAGTGCCGCTGAAGAGTATCTCTGTG ACTCTGGTCTATCTCCAGTGCCACTGAAGAGTATCTCTGTG < 41bp 1 0.10412234533324 1 0.0671935081481934 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VWA5A ENSG00000110002 CDS Human protein_coding chr11:123988382 chr11:123988384 synonymous SNV . 0 23 hm5C_associated_SNPs_44236 0 0 1 DDX3X POSTAR2 ENCODE chr11:123988379-123988412
64251 chr14 56083281 56083281 1 + G A UCEC 56083297 + 56083277 56083317 41 AAAGGCAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAA AAAGACAAGAAGCATTGCCCCTCCACCAAGAGACTAAACAA < 41bp 1 0.7460271750215 1 0.951425313949585 experiment 0.507945649956999 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control|31061524;GSE122266;BS-seq with improved protocol;Liver;Control KTN1 ENSG00000126777 CDS Human protein_coding chr14:56083297 chr14:56083281 synonymous SNV . 0 5 hm5C_associated_SNPs_44237 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr14:56083266-56083287
64251 chr19 35741400 35741400 1 + G A UCEC 35741406 + 35741386 35741426 41 CCCCGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCA CCCCGGCCAGCGTCAACAACCAGCTCAATGCCCAGCTGGCA < 41bp 1 0.48990842226674 1 0.580634355545044 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LSR ENSG00000105699 CDS Human protein_coding chr19:35741406 chr19:35741400 nonsynonymous SNV 0.576 3 15 hm5C_associated_SNPs_44238 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr20 5163074 5163074 1 + C T UCEC 5163068 + 5163048 5163088 41 TACTGAGTCTGGTCAAGAAGCATTATCGACTGCAGTTCTAC TACTGAGTCTGGTCAAGAAGCATTATTGACTGCAGTTCTAC < 41bp 1 0.228760752061534 1 0.0921469032764435 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CDS2 ENSG00000101290 CDS Human protein_coding chr20:5163068 chr20:5163074 stopgain 1.000 1 27 hm5C_associated_SNPs_44239 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr20:5163033-5163075
64251 chrX 55033528 55033528 1 + C T UCEC 55033545 + 55033525 55033565 41 AAGCCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATG AAGTCTCTCCTGACATAGAGCTGCCTAGCCTACCACTGATG < 41bp 1 0.283548192450789 1 0.089118093252182 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033545 chrX:55033528 nonsynonymous SNV 0.040 0 4 hm5C_associated_SNPs_44240 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:55033505-55033535
64251 chr15 75949311 75949311 1 + G A UCEC 75949304 + 75949284 75949324 41 TCTGCTCTGCCTATGCCAGGCGCCTTCGCCAAGGTGAAGGA TCTGCTCTGCCTATGCCAGGCGCCTTCACCAAGGTGAAGGA < 41bp 1 0.358031243224381 1 0.253836512565613 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX33 ENSG00000173548 CDS Human protein_coding chr15:75949304 chr15:75949311 nonsynonymous SNV 0.964 1 28 hm5C_associated_SNPs_44241 0 0 1 BUD13 POSTAR2 ENCODE chr15:75949280-75949336
64251 chr2 160623820 160623820 1 + C T UCEC 160623826 + 160623806 160623846 41 GATTCCGAAGAAGACGGAGACCATAACAGGACATTTGATAT GATTCCGAAGAAGATGGAGACCATAACAGGACATTTGATAT < 41bp 1 0.255498619099082 1 0.127755492925644 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160623826 chr2:160623820 nonsynonymous SNV 0.998 0 15 hm5C_associated_SNPs_44242 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:160623785-160623841
64251 chr2 73471784 73471784 1 + G T UCEC 73471781 + 73471761 73471801 41 TGGTGGATGCAGTGATGATGCTCGATGATTTGCTGCAGCTT TGGTGGATGCAGTGATGATGCTCTATGATTTGCTGCAGCTT < 41bp 1 0.710266720122642 1 0.394076198339462 experiment 0.579466559754717 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471781 chr2:73471784 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_44243 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr2:73471700-73471801
64251 chrX 40450493 40450493 1 + C A UCEC 40450488 + 40450468 40450508 41 GTGCTTTTCAATGTTTAGGACCTTTCTTGGCCAGGACTCGC GTGCTTTTCAATGTTTAGGACCTTTATTGGCCAGGACTCGC < 41bp 1 0.0296726778452317 1 0.00979825854301453 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450488 chrX:40450493 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_44244 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:40450480-40450500
64251 chrX 107911657 107911657 1 + G A UCEC 107911644 + 107911624 107911664 41 TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGGCCCTCCT TTCACGGTTTCCCTGGTGTGCAGGGTCCCCCAGACCCTCCT < 41bp 1 0.796236549320369 1 0.767727017402649 experiment 0.407526901359261 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107911644 chrX:107911657 nonsynonymous SNV 0.997 4 34 hm5C_associated_SNPs_44245 0 0 3 RPS3 POSTAR2 ENCODE chrX:107911625-107911683
64251 chr11 93912993 93912993 1 + C T UCEC 93912995 + 93912975 93913015 41 GATCCTGAGAAACGACAGCACCGTGCCCGATCAGTTTCAGT GATCCTGAGAAACGACAGTACCGTGCCCGATCAGTTTCAGT < 41bp 1 0.157509588255771 1 0.108411699533463 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PANX1 ENSG00000110218 CDS Human protein_coding chr11:93912995 chr11:93912993 synonymous SNV . 0 19 hm5C_associated_SNPs_44246 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:93912993-93912994
64251 chrX 70356357 70356357 1 + C T UCEC 70356356 + 70356336 70356376 41 TGCCCCCAGAAGATGAGGAGCCGCCTGCTCCTACCCTGCTA TGCCCCCAGAAGATGAGGAGCTGCCTGCTCCTACCCTGCTA < 41bp 1 0.321507901120628 1 0.150167495012283 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MED12 ENSG00000184634 CDS Human protein_coding chrX:70356356 chrX:70356357 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_44247 0 0 1 RPS3 POSTAR2 ENCODE chrX:70356337-70356405
64251 chr12 56622964 56622964 1 + C T UCEC 56622945 + 56622925 56622965 41 TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACG TGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAATG < 41bp 1 0.254698606889288 1 0.32562130689621 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622945 chr12:56622964 synonymous SNV . 0 40 hm5C_associated_SNPs_44249 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr12:56622905-56622971
64251 chr1 109801322 109801322 1 + C T UCEC 109801320 + 109801300 109801340 41 CGGTGGGCCAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTC CGGTGGGCCAGCCGCCAGGGCCTGGGGGCGGGCCGCCCTTC < 41bp 1 0.276987459441438 1 0.62649393081665 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801320 chr1:109801322 synonymous SNV . 0 23 hm5C_associated_SNPs_44250 0 0 3 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr1 109801322 109801322 1 + C T UCEC 109801328 + 109801308 109801348 41 CAGCCGCCAGGGCCCGGGGGCGGGCCGCCCTTCCTGCCCTC CAGCCGCCAGGGCCTGGGGGCGGGCCGCCCTTCCTGCCCTC < 41bp 1 0.334374651366169 1 0.862344741821289 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109801328 chr1:109801322 synonymous SNV . 0 15 hm5C_associated_SNPs_44251 0 0 3 FMR1 POSTAR2 ENCODE chr1:109801281-109801337
64251 chr2 32613941 32613941 1 + G A UCEC 32613943 + 32613923 32613963 41 GTGGCGTCCTCAGTGATGGACAGATTGTCTTACCTCTTACC GTGGCGTCCTCAGTGATGAACAGATTGTCTTACCTCTTACC < 41bp 1 0.131374902971965 1 0.774788618087769 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32613943 chr2:32613941 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_44252 0 0 4 EIF3H POSTAR2 ENCODE chr2:32613896-32613953
64251 chr11 60703957 60703957 1 + G A UCEC 60703977 + 60703957 60703997 41 GCCACTGACCCCACCTCCCCCCAGCCCCACAACTGGGTCTG ACCACTGACCCCACCTCCCCCCAGCCCCACAACTGGGTCTG < 41bp 1 0.0967734844195722 1 0.57856297492981 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703977 chr11:60703957 nonsynonymous SNV 0.006 0 1 hm5C_associated_SNPs_44254 0 0 1 SND1 POSTAR2 ENCODE chr11:60703952-60704021
64251 chr7 43840157 43840157 1 + C T UCEC 43840161 + 43840141 43840181 41 GACCTGCTGAAAGGGTCGCTCCTCTTCACAGGTCAGTGCTA GACCTGCTGAAAGGGTTGCTCCTCTTCACAGGTCAGTGCTA < 41bp 1 0.134661841189777 1 0.0855674147605896 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BLVRA ENSG00000106605 CDS Human protein_coding chr7:43840161 chr7:43840157 nonsynonymous SNV 0.693 2 17 hm5C_associated_SNPs_44255 0 0 1 DGCR8 POSTAR2 ENCODE chr7:43840121-43840164
64251 chr19 11241989 11241989 1 + G A UCEC 11242009 + 11241989 11242029 41 GTGAACATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTT ATGAACATCTGCCTGGAGTCCCGTCCCTGCCCAGAACCCTT < 41bp 1 0.0854254573709714 1 0.147691607475281 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11242009 chr19:11241989 nonsynonymous SNV 0.028 2 1 hm5C_associated_SNPs_44256 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:11241980-11242000
64251 chr1 214814422 214814422 1 + A G UCEC 214814421 + 214814401 214814441 41 AGAACAAGGAAAAAGAGCTGCAACTTTTAAATGATAAGGTA AGAACAAGGAAAAAGAGCTGCGACTTTTAAATGATAAGGTA < 41bp 1 0.197017949214917 1 0.237648010253906 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CENPF ENSG00000117724 CDS Human protein_coding chr1:214814421 chr1:214814422 nonsynonymous SNV 0.081 1 22 hm5C_associated_SNPs_44260 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214814335-214814467
64251 chr3 183435509 183435509 1 + G T UCEC 183435490 + 183435470 183435510 41 TATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAAGG TATTATCAAAGAACAGTTTGCTCTTGAAATGAAGAATAATG < 41bp 1 0.06094342370789 1 0.0535396635532379 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183435490 chr3:183435509 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_44263 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183435441-183435528
64251 chr1 150280540 150280540 1 + C T UCEC 150280549 + 150280529 150280569 41 ATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTAT ATTATGAGAAGTCATGCCGCCGGCGACAGAGGGAAAGCTAT < 41bp 1 0.656535563551401 1 0.742811799049377 experiment 0.686928872897198 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRPS21 ENSG00000187145 CDS Human other chr1:150280549 chr1:150280540 nonsynonymous SNV 0.957 0 12 hm5C_associated_SNPs_44264 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:150280480-150280540
64251 chr21 46596575 46596575 1 + C T UCEC 46596559 + 46596539 46596579 41 AGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACCGCAG AGCCTATTCCCAGTGAGGGTCTTCAGCTGCATTTACTGCAG < 41bp 1 0.345260529896979 1 0.64653480052948 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596559 chr21:46596575 nonsynonymous SNV 0.972 4 37 hm5C_associated_SNPs_44277 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr21:46596560-46596581
64251 chr19 35504584 35504584 1 + G A UCEC 35504567 + 35504547 35504587 41 CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAG CCATGTCACGCCCAACCTTTCCCGAGCCAGCAGCGACACAG < 41bp 1 0.758343266442029 1 0.146686136722565 experiment 0.483313467115942 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504567 chr19:35504584 nonsynonymous SNV 0.996 1 38 hm5C_associated_SNPs_44278 0 0 4 DDX24 POSTAR2 ENCODE chr19:35504563-35504591
64251 chr9 140002990 140002990 1 + G A UCEC 140002991 + 140002971 140003011 41 AAACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAG AAACCTGCTCAGCCTGGATACCTACGTGTTCAACACCGAAG < 41bp 1 0.0564913690182473 1 0.135922700166702 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002991 chr9:140002990 nonsynonymous SNV 0.430 1 20 hm5C_associated_SNPs_44280 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr9 140002990 140002990 1 + G A UCEC 140002992 + 140002972 140003012 41 AACCTGCTCAGCCTGGATGCCTACGTGTTCAACACCGAAGC AACCTGCTCAGCCTGGATACCTACGTGTTCAACACCGAAGC < 41bp 1 0.567948441756043 1 0.0895808041095734 experiment 0.864103116487914 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAN1B1 ENSG00000177239 CDS Human protein_coding chr9:140002992 chr9:140002990 nonsynonymous SNV 0.430 1 19 hm5C_associated_SNPs_44281 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140002947-140003029
64251 chr5 82834806 82834806 1 + G T UCEC 82834788 + 82834768 82834808 41 CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCAGCA CATATCTGACTCAGAAGGACCCAGTAGCACCATGGTCATCA < 41bp 1 0.0684991951751839 1 0.0750354528427124 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82834788 chr5:82834806 nonsynonymous SNV 0.172 2 39 hm5C_associated_SNPs_44283 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:82834799-82834837
64251 chr6 34730463 34730463 1 + G A UCEC 34730453 + 34730433 34730473 41 ATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGAC ATCAGAAATGGATGGAAGAGCAGGCTCAGAACCTGATTGAC < 41bp 1 0.647154781242612 1 0.782526731491089 experiment 0.705690437514776 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNRPC ENSG00000124562 CDS Human protein_coding chr6:34730453 chr6:34730463 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_44284 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:34730381-34730466
64251 chr16 2577852 2577852 1 + C T UCEC 2577853 + 2577833 2577873 41 CACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCT CACCTCCGCTCCTTCGAGGTCGATGCCTTCCAGGACTTGCT < 41bp 1 0.152469794065485 1 0.342213988304138 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577853 chr16:2577852 nonsynonymous SNV 0.907 1 20 hm5C_associated_SNPs_44285 0 0 1 AARS POSTAR2 ENCODE chr16:2577819-2577864
64251 chr12 122260568 122260568 1 + G A UCEC 122260559 + 122260539 122260579 41 CCGGAGCCCCTTGCCGAGGACCACCCCCCGCATACTCCAGG CCGGAGCCCCTTGCCGAGGACCACCCCCCACATACTCCAGG < 41bp 1 0.0247525319815173 1 0.051187127828598 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SETD1B ENSG00000139718 CDS Human protein_coding chr12:122260559 chr12:122260568 synonymous SNV . 0 30 hm5C_associated_SNPs_44286 0 0 3 RBM15 POSTAR2 ENCODE chr12:122260545-122260574
64251 chr11 830660 830660 1 + G A UCEC 830674 + 830654 830694 41 GAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGC GAGCTGAAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGC < 41bp 1 0.555545118958426 1 0.488420993089676 experiment 0.888909762083148 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:830674 chr11:830660 nonsynonymous SNV 1.000 2 7 hm5C_associated_SNPs_44287 0 0 10 GEMIN5 POSTAR2 ENCODE chr11:830650-830681
64251 chr11 58347083 58347083 1 + G A UCEC 58347094 + 58347074 58347114 41 GCAAGAAGAGTCCGCGACTCCTGTGAGTAACAGTCTTTCAG GCAAGAAGAATCCGCGACTCCTGTGAGTAACAGTCTTTCAG < 41bp 1 0.673491391848008 1 0.138572663068771 experiment 0.653017216303983 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58347094 chr11:58347083 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_44288 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:58347055-58347093
64251 chr17 80559253 80559253 1 + G A UCEC 80559263 + 80559243 80559283 41 GCGCCACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGC GCGCCACAACAGTGACCAGCCGGAGCAGCCGGAGCTGAAGC < 41bp 1 0.723162908999803 1 0.909982085227966 experiment 0.553674182000394 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559263 chr17:80559253 nonsynonymous SNV 0.001 3 11 hm5C_associated_SNPs_44291 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chr17 80559253 80559253 1 + G A UCEC 80559268 + 80559248 80559288 41 ACAACGGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC ACAACAGTGACCAGCCGGAGCAGCCGGAGCTGAAGCGGATC < 41bp 1 0.270452658638856 1 0.309814751148224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80559268 chr17:80559253 nonsynonymous SNV 0.001 3 6 hm5C_associated_SNPs_44292 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80559251-80559312
64251 chrX 73047046 73047046 1 - C T UCEC 73047047 - 73047027 73047067 41 TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC TCAGAGCAAGCATTGTGGAGCAGTTCCTTATGCCAGGCTGC < 41bp 1 0.0902930277495049 1 0.0749892294406891 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047047 chrX:73047046 . . 0 22 hm5C_associated_SNPs_44293 0 0 83 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73045260-73047900
64251 chr17 43311076 43311076 1 + G T UCEC 43311084 + 43311064 43311104 41 CTCGAGTACCTGGCCTTTGCCCAGTGCTCTGTCACGTAAGC CTCGAGTACCTGTCCTTTGCCCAGTGCTCTGTCACGTAAGC < 41bp 1 0.218614960534736 1 0.582166731357574 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43311084 chr17:43311076 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_44294 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:43311055-43311078
64251 chr11 67018209 67018209 1 + G A UCEC 67018208 + 67018188 67018228 41 AGGTCTGGATGTCTGTCTTCCGCTACCTCAGCCGCAGAGAA AGGTCTGGATGTCTGTCTTCCACTACCTCAGCCGCAGAGAA < 41bp 1 0.434487433531584 1 0.278157413005829 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018208 chr11:67018209 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_44295 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr11:67018169-67018209
64251 chr1 31899637 31899637 1 + C A UCEC 31899651 + 31899631 31899671 41 TGTCTGCGTGTCCATCGCTGCTGTCCTGCCCAAGGTCCAGG TGTCTGAGTGTCCATCGCTGCTGTCCTGCCCAAGGTCCAGG < 41bp 1 0.169546179911756 1 0.0425865054130554 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SERINC2 ENSG00000168528 CDS Human protein_coding chr1:31899651 chr1:31899637 stopgain 0.443 0 7 hm5C_associated_SNPs_44297 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:31899626-31899658
64251 chr1 109806279 109806279 1 + G A UCEC 109806280 + 109806260 109806300 41 GCAGCAGCCTGGTGGCCTGGCATGGCCTCTCGCTGCCCATC GCAGCAGCCTGGTGGCCTGACATGGCCTCTCGCTGCCCATC < 41bp 1 0.319966000802807 1 0.137721925973892 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109806280 chr1:109806279 stopgain 1.000 0 20 hm5C_associated_SNPs_44298 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:109806278-109806279
64251 chr16 89623349 89623349 1 + C T UCEC 89623367 + 89623347 89623387 41 CTCTCATTGGCCCGCCGCCCCATGGGCCGAAGAAAATGATC CTTTCATTGGCCCGCCGCCCCATGGGCCGAAGAAAATGATC < 41bp 1 0.514488224265304 1 0.293934464454651 experiment 0.971023551469392 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89623367 chr16:89623349 nonsynonymous SNV 0.846 5 3 hm5C_associated_SNPs_44299 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:89623326-89623375
64251 chr11 130003559 130003559 1 + G A UCEC 130003563 + 130003543 130003583 41 TGATTGAAGAAAGGAGGAACCAAAGCCTCTCTCTGCTCTAC TGATTGAAGAAAGGAGAAACCAAAGCCTCTCTCTGCTCTAC < 41bp 1 0.517827636257691 1 0.479012042284012 experiment 0.964344727484618 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130003563 chr11:130003559 synonymous SNV . 0 17 hm5C_associated_SNPs_44300 0 0 16 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:130003529-130003561
64251 chr11 130003559 130003559 1 + G A UCEC 130003575 + 130003555 130003595 41 GGAGGAACCAAAGCCTCTCTCTGCTCTACAAAGTACCTTAT GGAGAAACCAAAGCCTCTCTCTGCTCTACAAAGTACCTTAT < 41bp 1 0.472057790550075 1 0.589008510112762 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130003575 chr11:130003559 synonymous SNV . 0 5 hm5C_associated_SNPs_44301 0 0 16 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:130003529-130003561
64251 chr12 110770420 110770420 1 + G T UCEC 110770433 + 110770413 110770453 41 GGACAGAGTGGAAGGTGATACTTGTTCCCTTAATGAGTTTA GGACAGATTGGAAGGTGATACTTGTTCCCTTAATGAGTTTA < 41bp 1 0.164316637005355 1 0.108443975448608 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110770433 chr12:110770420 nonsynonymous SNV 0.985 1 8 hm5C_associated_SNPs_44302 0 0 19 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:110770400-110770420
64251 chr2 190531698 190531698 1 + G A UCEC 190531711 + 190531691 190531731 41 ACATGAAGGAAGTAATTCAGCAGTTCATTGATGTCCTGAGT ACATGAAAGAAGTAATTCAGCAGTTCATTGATGTCCTGAGT < 41bp 1 0.387469775845626 1 0.340381324291229 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531711 chr2:190531698 synonymous SNV . 0 8 hm5C_associated_SNPs_44303 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190531441-190531835
64251 chr19 50985731 50985731 1 + G A UCEC 50985739 + 50985719 50985759 41 GGTGTCTCCTGCGCCCGCCTCCCCCATGGCCCCATGCAGCC GGTGTCTCCTGCACCCGCCTCCCCCATGGCCCCATGCAGCC < 41bp 1 0.135323494745787 1 0.295793533325195 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EMC10 ENSG00000161671 CDS Human protein_coding chr19:50985739 chr19:50985731 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_44305 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50985638-50985862
64251 chr17 7479917 7479917 1 + C T UCEC 7479907 + 7479887 7479927 41 TGTCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGT TGTCACGCCTGTATCGGGGGCACCAACGTGTGTGCTGAGGT < 41bp 1 0.467021867144841 1 0.342097103595734 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479907 chr17:7479917 nonsynonymous SNV 0.977 3 31 hm5C_associated_SNPs_44307 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479917 7479917 1 + C T UCEC 7479909 + 7479889 7479929 41 TCACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGC TCACGCCTGTATCGGGGGCACCAACGTGTGTGCTGAGGTGC < 41bp 1 0.117697454018347 1 0.176065295934677 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479909 chr17:7479917 nonsynonymous SNV 0.977 3 29 hm5C_associated_SNPs_44308 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr17 7479917 7479917 1 + C T UCEC 7479910 + 7479890 7479930 41 CACGCCTGTATCGGGGGCACCAACGTGCGTGCTGAGGTGCA CACGCCTGTATCGGGGGCACCAACGTGTGTGCTGAGGTGCA < 41bp 1 0.418037717099291 1 0.305774867534637 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479910 chr17:7479917 nonsynonymous SNV 0.977 3 28 hm5C_associated_SNPs_44309 0 0 41 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7479906-7479936
64251 chr1 43893255 43893255 1 + C T UCEC 43893251 + 43893231 43893271 41 CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAG CACCATTCCGTCGAGACTTACAGGTTTACGCTGGGCGTCAG < 41bp 1 0.373139101271622 1 0.883818030357361 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893251 chr1:43893255 nonsynonymous SNV 0.889 0 25 hm5C_associated_SNPs_44310 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:43893233-43893261
64251 chrX 73044235 73044235 1 - G A UCEC 73044221 - 73044201 73044241 41 AAGGCACCATATAAATGTAACTGTTGATTTTCTCACTTGGT AAGGCATCATATAAATGTAACTGTTGATTTTCTCACTTGGT < 41bp 1 0.0279303697681224 1 0.125934332609177 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044221 chrX:73044235 . . 0 7 hm5C_associated_SNPs_44313 0 0 72 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr11 57574442 57574442 1 + G A UCEC 57574432 + 57574412 57574452 41 AAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTC AAACGATACAGTGGATTTCCCTAAAAGAACAAGTCCAGCTC < 41bp 1 0.699462574559217 1 0.520591735839844 experiment 0.601074850881566 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57574432 chr11:57574442 synonymous SNV . 0 31 hm5C_associated_SNPs_44317 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57574418-57574450
64251 chr17 16285400 16285400 1 + A G UCEC 16285385 + 16285365 16285405 41 GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAACATCC GCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAGCATCC < 41bp 1 0.288045845541878 1 0.122804522514343 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBB ENSG00000170315 CDS Human protein_coding chr17:16285385 chr17:16285400 nonsynonymous SNV 0.999 0 36 hm5C_associated_SNPs_44318 0 0 2 SND1 POSTAR2 ENCODE chr17:16285363-16285404
64251 chr6 4935975 4935975 1 + G A UCEC 4935980 + 4935960 4936000 41 CTTGTTATCCACAAAGTCCTCAGAGAATAACTCACTAAATC CTTGTTATCCACAAAATCCTCAGAGAATAACTCACTAAATC < 41bp 1 0.644144627244019 1 0.809953927993774 experiment 0.711710745511962 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4935980 chr6:4935975 synonymous SNV . 0 16 hm5C_associated_SNPs_44320 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:4935947-4935975
64251 chr1 150923134 150923134 1 + A G UCEC 150923116 + 150923096 150923136 41 CTGTCTGTCTCGAGTCAGACCTATGAGGAATGAGCAGTACC CTGTCTGTCTCGAGTCAGACCTATGAGGAATGAGCAGTGCC < 41bp 1 0.226508162628771 1 0.207189798355103 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923116 chr1:150923134 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_44324 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:150923120-150923144
64251 chr17 37360877 37360877 1 + C T UCEC 37360862 + 37360842 37360882 41 CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCCAAGGA CAGGCCAAGAAGGAGGAGATCATCAAGACTTTATCTAAGGA < 41bp 1 0.45257178060324 1 0.183613955974579 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360862 chr17:37360877 synonymous SNV . 0 36 hm5C_associated_SNPs_44325 0 0 57 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr17 37360877 37360877 1 + C T UCEC 37360876 + 37360856 37360896 41 GGAGATCATCAAGACTTTATCCAAGGAGGAAGAGACCAAGA GGAGATCATCAAGACTTTATCTAAGGAGGAAGAGACCAAGA < 41bp 1 0.747676299068235 1 0.82434606552124 experiment 0.504647401863529 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360876 chr17:37360877 synonymous SNV . 0 22 hm5C_associated_SNPs_44326 0 0 57 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:37360860-37360920
64251 chr22 30416177 30416177 1 + C T UCEC 30416167 + 30416147 30416187 41 CCCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCTACAG CCCTTTTGAGACCAGAGGACCAAACGTGGATAGTTCTACAG < 41bp 1 0.1109359792345 1 0.206788897514343 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416167 chr22:30416177 synonymous SNV . 0 31 hm5C_associated_SNPs_44332 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:30416142-30416177
64251 chr12 989997 989997 1 + G A UCEC 989989 + 989969 990009 41 ATTCTACAGTCCTATCCCCTCCCATGCCGACAGAAGTACTG ATTCTACAGTCCTATCCCCTCCCATGCCAACAGAAGTACTG < 41bp 1 0.115348864761566 1 0.116830974817276 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient WNK1 ENSG00000060237 CDS Human protein_coding chr12:989989 chr12:989997 synonymous SNV . 0 29 hm5C_associated_SNPs_44333 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:989977-990008
64251 chr14 73725987 73725987 1 + C T UCEC 73725978 + 73725958 73725998 41 TTTTGCTTCTTCTTTCTAGACTCCAGAGGCCAGTGGTGGGC TTTTGCTTCTTCTTTCTAGACTCCAGAGGTCAGTGGTGGGC < 41bp 1 0.660159896480506 1 0.772560954093933 experiment 0.679680207038988 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control PAPLN ENSG00000100767 CDS Human protein_coding chr14:73725978 chr14:73725987 synonymous SNV . 0 30 hm5C_associated_SNPs_44334 0 0 2 DDX24 POSTAR2 ENCODE chr14:73725975-73726020
64251 chr1 236711362 236711362 1 + A G UCEC 236711377 + 236711357 236711397 41 GGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCT GGCGTGCACAGCCTGGAGTACAAACACAGATTTAAAGAGCT < 41bp 1 0.0786064119588236 1 0.155280888080597 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711377 chr1:236711362 synonymous SNV . 0 6 hm5C_associated_SNPs_44335 0 0 2 RPS3 POSTAR2 ENCODE chr1:236711321-236711387
64251 chr7 11076068 11076068 1 + G A UCEC 11076066 + 11076046 11076086 41 CAAGGATCAATGCCCGGCTTCAGCAGTATCGTGCCAAAGCA CAAGGATCAATGCCCGGCTTCAACAGTATCGTGCCAAAGCA < 41bp 1 0.600521160177377 1 0.0930892527103424 experiment 0.798957679645246 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PHF14 ENSG00000106443 CDS Human protein_coding chr7:11076066 chr7:11076068 synonymous SNV . 0 23 hm5C_associated_SNPs_44336 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:11076064-11076085
64251 chr8 11696003 11696003 1 + G A UCEC 11695990 + 11695970 11696010 41 AGAATCTTCCCAACTGTCAGCTGATTTCCCGAAGCCACTAC AGAATCTTCCCAACTGTCAGCTGATTTCCCGAAACCACTAC < 41bp 1 0.422818299765035 1 0.239761680364609 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11695990 chr8:11696003 nonsynonymous SNV 1.000 0 34 hm5C_associated_SNPs_44337 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:11695947-11696024
64251 chr11 67017884 67017884 1 + C T UCEC 67017891 + 67017871 67017911 41 GAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTAC GAAAGCCAAGATCTGGGGATCGTACCTCACTGTCACGCTAC < 41bp 1 0.11295928386415 1 0.188031762838364 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67017891 chr11:67017884 nonsynonymous SNV 1.000 2 14 hm5C_associated_SNPs_44339 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67017853-67017899
64251 chr19 1036136 1036136 1 + C A UCEC 1036125 + 1036105 1036145 41 TCCCGGCCCCTTTCCCTCACCCAGGCCAAGACTAAGGGGCT TCCCGGCCCCTTTCCCTCACCCAGGCCAAGAATAAGGGGCT < 41bp 1 0.302913782393049 1 0.675444364547729 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036125 chr19:1036136 nonsynonymous SNV 0.964 2 32 hm5C_associated_SNPs_44340 0 0 3 LIN28A POSTAR2 GSE39873,GSM980593 chr19:1036120-1036140
64251 chr15 75949305 75949305 1 + G A UCEC 75949304 + 75949284 75949324 41 TCTGCTCTGCCTATGCCAGGCGCCTTCGCCAAGGTGAAGGA TCTGCTCTGCCTATGCCAGGCACCTTCGCCAAGGTGAAGGA < 41bp 1 0.327132364275415 1 0.0870012044906616 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX33 ENSG00000173548 CDS Human protein_coding chr15:75949304 chr15:75949305 nonsynonymous SNV 0.960 1 22 hm5C_associated_SNPs_44341 0 0 1 BUD13 POSTAR2 ENCODE chr15:75949280-75949336
64251 chr1 109643194 109643194 1 + C A UCEC 109643189 + 109643169 109643209 41 AATTGATCAGATAGACGAGGCCGGGCTTGTCCCCGGCCACT AATTGATCAGATAGACGAGGCCGGGATTGTCCCCGGCCACT < 41bp 1 0.498885577053546 1 0.15234899520874 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643189 chr1:109643194 . . 0 26 hm5C_associated_SNPs_44342 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643199 + 109643179 109643219 41 ATAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAG ATAGACGAGGCCGGGATTGTCCCCGGCCACTGATTATCGAG < 41bp 1 0.713243346018456 1 0.43705341219902 experiment 0.573513307963089 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643199 chr1:109643194 . . 0 16 hm5C_associated_SNPs_44343 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643200 + 109643180 109643220 41 TAGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGG TAGACGAGGCCGGGATTGTCCCCGGCCACTGATTATCGAGG < 41bp 1 0.534843978615166 1 0.513755857944489 experiment 0.930312042769669 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643200 chr1:109643194 . . 0 15 hm5C_associated_SNPs_44344 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643201 + 109643181 109643221 41 AGACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGC AGACGAGGCCGGGATTGTCCCCGGCCACTGATTATCGAGGC < 41bp 1 0.567225381410709 1 0.888897657394409 experiment 0.865549237178583 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643201 chr1:109643194 . . 0 14 hm5C_associated_SNPs_44345 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643202 + 109643182 109643222 41 GACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCG GACGAGGCCGGGATTGTCCCCGGCCACTGATTATCGAGGCG < 41bp 1 0.403690613349735 1 0.716338574886322 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|30526041;GSE122413;RNA-BisSeq;HEK293;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643202 chr1:109643194 . . 0 13 hm5C_associated_SNPs_44346 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643205 + 109643185 109643225 41 GAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATT GAGGCCGGGATTGTCCCCGGCCACTGATTATCGAGGCGATT < 41bp 1 0.0682342619262087 1 0.0406433343887329 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643205 chr1:109643194 . . 0 10 hm5C_associated_SNPs_44347 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643206 + 109643186 109643226 41 AGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATTC AGGCCGGGATTGTCCCCGGCCACTGATTATCGAGGCGATTC < 41bp 1 0.363244927580752 1 0.029891312122345 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643206 chr1:109643194 . . 0 9 hm5C_associated_SNPs_44348 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643194 109643194 1 + C A UCEC 109643208 + 109643188 109643228 41 GCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATTCTG GCCGGGATTGTCCCCGGCCACTGATTATCGAGGCGATTCTG < 41bp 1 0.566551699856188 1 0.119059324264526 experiment 0.866896600287625 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643208 chr1:109643194 . . 0 7 hm5C_associated_SNPs_44349 0 0 77 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr7 98591316 98591316 1 + A G UCEC 98591325 + 98591305 98591345 41 CCCTGGAAGGCATCGTCGATCAGATGGTCTGGTTCAGAGAA CCCTGGAAGGCGTCGTCGATCAGATGGTCTGGTTCAGAGAA < 41bp 1 0.344410444214022 1 0.601672351360321 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRRAP ENSG00000196367 CDS Human protein_coding chr7:98591325 chr7:98591316 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_44350 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr7:98591300-98591320
64251 chrX 128695215 128695215 1 + A G UCEC 128695224 + 128695204 128695244 41 TGTGAAGGAACAAGAATGGTCCATGGCTGTAGAGAGAGGTT TGTGAAGGAACGAGAATGGTCCATGGCTGTAGAGAGAGGTT < 41bp 1 0.102790662634893 1 0.0787133574485779 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control OCRL ENSG00000122126 CDS Human protein_coding chrX:128695224 chrX:128695215 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_44351 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:128695166-128695244
64251 chr6 31929385 31929385 1 + C G UCEC 31929378 + 31929358 31929398 41 CAGAGCCTCCATCTCAGGAGCAGTGGGCCATCCCTGTGGAC CAGAGCCTCCATCTCAGGAGCAGTGGGGCATCCCTGTGGAC < 41bp 1 0.27002251362004 1 0.333199799060822 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SKIV2L ENSG00000204351 CDS Human protein_coding chr6:31929378 chr6:31929385 nonsynonymous SNV 0.810 4 28 hm5C_associated_SNPs_44352 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr6:31929371-31929401
64251 chr19 49377571 49377571 1 + G T UCEC 49377573 + 49377553 49377593 41 GATGAGGAAGAAGATGAGGACAGTGACTCTGGATCAGATGA GATGAGGAAGAAGATGAGTACAGTGACTCTGGATCAGATGA < 41bp 1 0.348653950682976 1 0.187388271093369 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377573 chr19:49377571 nonsynonymous SNV 0.311 1 19 hm5C_associated_SNPs_44354 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 49377571 49377571 1 + G T UCEC 49377579 + 49377559 49377599 41 GAAGAAGATGAGGACAGTGACTCTGGATCAGATGAGGAAGA GAAGAAGATGAGTACAGTGACTCTGGATCAGATGAGGAAGA < 41bp 1 0.306510795254951 1 0.176839053630829 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377579 chr19:49377571 nonsynonymous SNV 0.311 1 13 hm5C_associated_SNPs_44355 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr19 49377571 49377571 1 + G T UCEC 49377587 + 49377567 49377607 41 TGAGGACAGTGACTCTGGATCAGATGAGGAAGAGGGAGAAG TGAGTACAGTGACTCTGGATCAGATGAGGAAGAGGGAGAAG < 41bp 1 0.433968211020848 1 0.346685737371445 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377587 chr19:49377571 nonsynonymous SNV 0.311 1 5 hm5C_associated_SNPs_44356 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49377539-49377589
64251 chr18 13029797 13029797 1 + T A UCEC 13029800 + 13029780 13029820 41 TAAAACAGGGGGCAGAGTGTCCTCACCAAAATAAGACAGTT TAAAACAGGGGGCAGAGAGTCCTCACCAAAATAAGACAGTT < 41bp 1 0.153317724123682 1 0.200478851795197 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13029800 chr18:13029797 nonsynonymous SNV 0.003 0 18 hm5C_associated_SNPs_44359 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chr18:13029780-13029800
64251 chr3 49050659 49050659 1 + C G UCEC 49050657 + 49050637 49050677 41 TGGGCCCAGTGTCTACCCTGCCCTCTCTGCACGGGAAGCAG TGGGCCCAGTGTCTACCCTGCCGTCTCTGCACGGGAAGCAG < 41bp 1 0.0441503979343143 1 0.063403308391571 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050657 chr3:49050659 synonymous SNV . 0 23 hm5C_associated_SNPs_44360 0 0 37 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49050600-49050660
64251 chr19 36229292 36229292 1 + C T UCEC 36229279 + 36229259 36229299 41 TCATCAACCACTCCTGTGAGCCCAACTGCTTCTCTCGGGTC TCATCAACCACTCCTGTGAGCCCAACTGCTTCTTTCGGGTC < 41bp 1 0.100947570040433 1 0.197644978761673 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36229279 chr19:36229292 nonsynonymous SNV 0.986 4 34 hm5C_associated_SNPs_44361 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:36229286-36229313
64251 chr16 67662338 67662338 1 + C A UCEC 67662319 + 67662299 67662339 41 CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGCG CACCCACACCGGGGAGAAGCCTTACGCCTGCAGCCACTGAG < 41bp 1 0.287198198325357 1 0.128298074007034 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient CTCF ENSG00000102974 CDS Human protein_coding chr16:67662319 chr16:67662338 stopgain 1.000 1 40 hm5C_associated_SNPs_44362 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr6 158497778 158497778 1 + C T UCEC 158497758 + 158497738 158497778 41 AAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTGC AAGCGACAAATGCCGCACCCCCGCCTGGACAGACAGGGTGT < 41bp 1 0.115932353862707 1 0.160427570343018 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158497758 chr6:158497778 synonymous SNV . 0 41 hm5C_associated_SNPs_44364 0 0 3 GPKOW POSTAR2 ENCODE chr6:158497774-158497838
64251 chr7 35943889 35943889 1 + G T UCEC 35943897 + 35943877 35943917 41 AACAAGAAGAAAGGGAAGATCTTTTAAACTCTCTATTGACC AACAAGAAGAAATGGAAGATCTTTTAAACTCTCTATTGACC < 41bp 1 0.0476860223018829 1 0.0601078569889069 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35943897 chr7:35943889 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_44365 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:35943885-35943928
64251 chr19 38572443 38572443 1 + C T UCEC 38572456 + 38572436 38572476 41 GGGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGG GGGCGTGTGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGG < 41bp 1 0.0692090634515965 1 0.375896245241165 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572456 chr19:38572443 nonsynonymous SNV 0.017 5 8 hm5C_associated_SNPs_44368 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572443-38572444
64251 chr19 38572443 38572443 1 + C T UCEC 38572457 + 38572437 38572477 41 GGCGTGCGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGA GGCGTGTGCGCAAGGGTGGCCGACTGGCCGCCCAAGCGGGA < 41bp 1 0.176753203596613 1 0.280963450670242 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38572457 chr19:38572443 nonsynonymous SNV 0.017 5 7 hm5C_associated_SNPs_44369 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38572443-38572444
64251 chr2 73471150 73471150 1 + C T UCEC 73471157 + 73471137 73471177 41 ATCAAAGAGATTGCTGTGACCGTGAAGAAGGCAGATAAAGT ATCAAAGAGATTGTTGTGACCGTGAAGAAGGCAGATAAAGT < 41bp 1 0.445276970047143 1 0.670185685157776 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471157 chr2:73471150 nonsynonymous SNV 0.997 1 14 hm5C_associated_SNPs_44370 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:73471091-73471170
64251 chr2 73471150 73471150 1 + C T UCEC 73471168 + 73471148 73471188 41 TGCTGTGACCGTGAAGAAGGCAGATAAAGTGTAAGTCTGTA TGTTGTGACCGTGAAGAAGGCAGATAAAGTGTAAGTCTGTA < 41bp 1 0.294429539714947 1 0.466152638196945 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471168 chr2:73471150 nonsynonymous SNV 0.997 1 3 hm5C_associated_SNPs_44371 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:73471091-73471170
64251 chrX 73046503 73046503 1 - C A UCEC 73046490 - 73046470 73046510 41 GCTTGAAGACCTGGGGAAATCCCAAGATGAGAACCCTAAAC GCTTGAATACCTGGGGAAATCCCAAGATGAGAACCCTAAAC < 41bp 1 0.567996884311478 1 0.612966418266296 experiment 0.864006231377044 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73046490 chrX:73046503 . . 0 8 hm5C_associated_SNPs_44372 0 0 81 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:73045260-73046780
64251 chr5 176722010 176722010 1 + T G UCEC 176722024 + 176722004 176722044 41 GGCCTTTTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG GGCCTTGTTATATGAGCCAACAACTCAGGCCTCAGGAAGAG < 41bp 1 0.148118288311877 1 0.0864331722259521 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NSD1 ENSG00000165671 CDS Human protein_coding chr5:176722024 chr5:176722010 nonsynonymous SNV 0.986 2 7 hm5C_associated_SNPs_44373 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:176721960-176722040
64251 chr6 31525852 31525852 1 + C T UCEC 31525833 + 31525813 31525853 41 GAAACCCAGGAACCTGAGTCCTTCTCAGCCTGGTCAGATCG GAAACCCAGGAACCTGAGTCCTTCTCAGCCTGGTCAGATTG < 41bp 1 0.277500091938199 1 0.1507368683815 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31525833 chr6:31525852 nonsynonymous SNV 0.998 3 40 hm5C_associated_SNPs_44374 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:31525849-31525890
64251 chrX 73044584 73044584 1 - C T UCEC 73044568 - 73044548 73044588 41 TGAAGTAATAGATGTGAGATCCAGACCGAAAGTCACTTAAT TGAAATAATAGATGTGAGATCCAGACCGAAAGTCACTTAAT < 41bp 1 0.257869839525163 1 0.717103004455566 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044568 chrX:73044584 . . 0 5 hm5C_associated_SNPs_44375 0 0 63 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr7 150931171 150931171 1 + G T UCEC 150931172 + 150931152 150931192 41 GGGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTC GGGCTGTCTCTGGGGTGCATCCTGAGCCTCCTGCGGGTTTC < 41bp 1 0.505115984741904 1 0.140098392963409 experiment 0.989768030516191 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CHPF2;CHPF2 ENSG00000033100;ENSG00000033100 exonic;splicing Human other chr7:150931172 chr7:150931171 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_44376 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150931140-150931178
64251 chr7 150931171 150931171 1 + G T UCEC 150931173 + 150931153 150931193 41 GGCTGTCTCTGGGGTGCAGCCTGAGCCTCCTGCGGGTTTCC GGCTGTCTCTGGGGTGCATCCTGAGCCTCCTGCGGGTTTCC < 41bp 1 0.631024647441109 1 0.261405825614929 experiment 0.737950705117782 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CHPF2;CHPF2 ENSG00000033100;ENSG00000033100 exonic;splicing Human other chr7:150931173 chr7:150931171 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_44377 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:150931140-150931178
64251 chr2 182786894 182786894 1 + G A UCEC 182786886 + 182786866 182786906 41 AGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAG AGTGGGCAAATCCAAAACCCCATTAGTGACAAGGAAGAAAG < 41bp 1 0.312709237257528 1 0.0684865117073059 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786886 chr2:182786894 nonsynonymous SNV 0.032 0 29 hm5C_associated_SNPs_44378 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:182786857-182786895
64251 chr7 70252222 70252222 1 + A C UCEC 70252228 + 70252208 70252248 41 GTTCGGCCACAAGGATGGCCCCAGTGTGCAGAACTTTAGCA GTTCGGCCACAAGGCTGGCCCCAGTGTGCAGAACTTTAGCA < 41bp 1 0.158460638011605 1 0.0669603049755096 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:70252228 chr7:70252222 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_44379 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:70252208-70252231
64251 chr19 17273853 17273853 1 + G T UCEC 17273851 + 17273831 17273871 41 TTTGAAGACTTCGAGAGGAACAGCTTTGAGCAGTTCTGCAT TTTGAAGACTTCGAGAGGAACATCTTTGAGCAGTTCTGCAT < 41bp 1 0.114606058589553 1 0.0505989491939545 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17273851 chr19:17273853 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_44380 0 0 2 BUD13 POSTAR2 ENCODE chr19:17273806-17273897
64251 chr12 51449982 51449982 1 + T G UCEC 51449969 + 51449949 51449989 41 CAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTAAC CAATACATGATATCTTGGCTCTGAGAGAGTGTTGCTCTAAC < 41bp 1 0.573247117075848 1 0.357956230640411 experiment 0.853505765848305 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449969 chr12:51449982 nonsynonymous SNV 0.977 4 34 hm5C_associated_SNPs_44381 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:51449961-51450001
64251 chr2 54845322 54845322 1 + A G UCEC 54845324 + 54845304 54845344 41 GCCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGG GCCTCACTAAACTGTTGGGCCCCGAAGGTAGGGACTCAAGG < 41bp 1 0.230749053386061 1 0.143860727548599 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845324 chr2:54845322 nonsynonymous SNV 0.964 5 19 hm5C_associated_SNPs_44382 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845322 54845322 1 + A G UCEC 54845325 + 54845305 54845345 41 CCTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGG CCTCACTAAACTGTTGGGCCCCGAAGGTAGGGACTCAAGGG < 41bp 1 0.202771627667114 1 0.246159434318542 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845325 chr2:54845322 nonsynonymous SNV 0.964 5 18 hm5C_associated_SNPs_44383 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr2 54845322 54845322 1 + A G UCEC 54845326 + 54845306 54845346 41 CTCACTAAACTGTTGGACCCCGAAGGTAGGGACTCAAGGGA CTCACTAAACTGTTGGGCCCCGAAGGTAGGGACTCAAGGGA < 41bp 1 0.278130121455894 1 0.530791580677032 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54845326 chr2:54845322 nonsynonymous SNV 0.964 5 17 hm5C_associated_SNPs_44384 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54845287-54845330
64251 chr15 52338937 52338937 1 + G A UCEC 52338932 + 52338912 52338952 41 TCCCAGTGGAAGCCAATTAACAGACGATGTGGGCTCTCTTA TCCCAGTGGAAGCCAATTAACAGACAATGTGGGCTCTCTTA < 41bp 1 0.683389718595491 1 0.680657148361206 experiment 0.633220562809018 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52338932 chr15:52338937 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_44385 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr15:52338891-52338952
64251 chr12 57919787 57919787 1 + C T UCEC 57919788 + 57919768 57919808 41 CACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAG CACTTTACAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAG < 41bp 1 0.300520765050378 1 0.24921789765358 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919788 chr12:57919787 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_44386 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919789 + 57919769 57919809 41 ACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGC ACTTTACAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAGC < 41bp 1 0.183251872937653 1 0.233287781476974 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919789 chr12:57919787 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_44387 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919790 + 57919770 57919810 41 CTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCT CTTTACAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAGCT < 41bp 1 0.331383967018039 1 0.41313898563385 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919790 chr12:57919787 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_44388 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919794 + 57919774 57919814 41 ACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCC ACAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAGCTTCCC < 41bp 1 0.261449288524701 1 0.13982030749321 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919794 chr12:57919787 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_44389 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919795 + 57919775 57919815 41 CAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCA CAGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAGCTTCCCA < 41bp 1 0.241746421212578 1 0.251450896263123 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919795 chr12:57919787 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_44390 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919796 + 57919776 57919816 41 AGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCAC AGGGCCGAAGGTCCCGTGCCCAGGCACCCTCAGCTTCCCAC < 41bp 1 0.509082580756917 1 0.833602070808411 experiment 0.981834838486166 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919796 chr12:57919787 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_44391 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919800 + 57919780 57919820 41 CCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT CCGAAGGTCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCT < 41bp 1 0.254187106229575 1 0.0346833467483521 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919800 chr12:57919787 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_44392 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919802 + 57919782 57919822 41 GAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA GAAGGTCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCA < 41bp 1 0.0247321221004842 1 0.0139928758144379 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919802 chr12:57919787 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_44393 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919803 + 57919783 57919823 41 AAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT AAGGTCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCAT < 41bp 1 0.129730750167768 1 0.0355278551578522 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919803 chr12:57919787 nonsynonymous SNV 1.000 3 5 hm5C_associated_SNPs_44394 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919804 + 57919784 57919824 41 AGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC AGGTCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATC < 41bp 1 0.490915393020603 1 0.136484891176224 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919804 chr12:57919787 nonsynonymous SNV 1.000 3 4 hm5C_associated_SNPs_44395 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr12 57919787 57919787 1 + C T UCEC 57919806 + 57919786 57919826 41 GCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCAC GTCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCAC < 41bp 1 0.62296325101649 1 0.67266833782196 experiment 0.754073497967021 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919806 chr12:57919787 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_44396 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:57919780-57919800
64251 chr11 35201888 35201888 1 + A G UCEC 35201875 + 35201855 35201895 41 CGGATCCACCCCAACTCCATCTGTGCAGCAAACAACACAGG CGGATCCACCCCAACTCCATCTGTGCAGCAAACGACACAGG < 41bp 1 0.375431655782876 1 0.346743702888489 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35201875 chr11:35201888 nonsynonymous SNV 0.388 0 34 hm5C_associated_SNPs_44397 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35201880-35201900
64251 chr11 35201888 35201888 1 + A G UCEC 35201902 + 35201882 35201922 41 GCAAACAACACAGGGGTGTACATCCTCACATCCAACACCTC GCAAACGACACAGGGGTGTACATCCTCACATCCAACACCTC < 41bp 1 0.154994451186717 1 0.147462874650955 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35201902 chr11:35201888 nonsynonymous SNV 0.388 0 7 hm5C_associated_SNPs_44398 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35201880-35201900
64251 chrX 73042709 73042709 1 - C A UCEC 73042691 - 73042671 73042711 41 TAGCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT TATCTGTGATATGTTCGATACTAAGGAAAAACTAAACAGAT < 41bp 1 0.185351600567915 1 0.432088136672974 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042691 chrX:73042709 . . 0 3 hm5C_associated_SNPs_44399 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041340-73042860
64251 chr18 3457605 3457605 1 + C A UCEC 3457613 + 3457593 3457633 41 TAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGTCCATCAG TAAGCCGTCATCACCGGGATCAGTTTTGGCTCGTCCATCAG < 41bp 1 0.286140957233028 1 0.065497875213623 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457613 chr18:3457605 synonymous SNV . 0 13 hm5C_associated_SNPs_44400 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr18 3457605 3457605 1 + C A UCEC 3457622 + 3457602 3457642 41 ATCCCCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC ATCACCGGGATCAGTTTTGGCTCGTCCATCAGTGATCTGCC < 41bp 1 0.618888862666207 1 0.281286299228668 experiment 0.762222274667586 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457622 chr18:3457605 synonymous SNV . 0 4 hm5C_associated_SNPs_44401 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr11 44129676 44129676 1 + A G UCEC 44129673 + 44129653 44129693 41 AATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACAC AATGAACTGCTCATGGCCATCTCGGACAGTGACTACTACAC < 41bp 1 0.777089091056339 1 0.525540173053741 experiment 0.445821817887322 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129673 chr11:44129676 synonymous SNV . 0 24 hm5C_associated_SNPs_44404 0 0 4 SND1 POSTAR2 ENCODE chr11:44129597-44129677
64251 chr12 53776171 53776171 1 + A G UCEC 53776180 + 53776160 53776200 41 TGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGA TGGTGGGCAGTGTGTTGTGGCTGCCGCTCCCAACTTACAGA < 41bp 1 0.301756700720977 1 0.0289565622806549 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SP1 ENSG00000185591 CDS Human protein_coding chr12:53776180 chr12:53776171 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_44405 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53776141-53776179
64251 chrX 123195667 123195667 1 + T C UCEC 123195669 + 123195649 123195689 41 GATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAAT GATTGAAATAATGCTTTGCACCATTAGACAAGCGGCTGAAT < 41bp 1 0.0802592264633086 1 0.0301941633224487 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195669 chrX:123195667 synonymous SNV . 0 19 hm5C_associated_SNPs_44406 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:123195625-123195670
64251 chrX 123195667 123195667 1 + T C UCEC 123195670 + 123195650 123195690 41 ATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAATG ATTGAAATAATGCTTTGCACCATTAGACAAGCGGCTGAATG < 41bp 1 0.272846565348931 1 0.0646955370903015 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123195670 chrX:123195667 synonymous SNV . 0 18 hm5C_associated_SNPs_44407 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:123195625-123195670
64251 chr5 162869386 162869386 1 + G T UCEC 162869395 + 162869375 162869415 41 TACAGATAAATGGCAGAGATCTGACCTTCTGGCAAGAGCTT TACAGATAAATTGCAGAGATCTGACCTTCTGGCAAGAGCTT < 41bp 1 0.160488806406362 1 0.0488498210906982 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869395 chr5:162869386 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_44408 0 0 22 MOV10 POSTAR2 GSE37524,GSM921128 chr5:162869379-162869405
64251 chr19 33465002 33465002 1 + A G UCEC 33465022 + 33465002 33465042 41 ACCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT GCCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTT < 41bp 1 0.169404125873596 1 0.139242351055145 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465022 chr19:33465002 nonsynonymous SNV 0.558 3 1 hm5C_associated_SNPs_44409 0 0 4 CPSF2 POSTAR2 GSE37401,GSM917670 chr19:33464996-33465029
64251 chr1 38484934 38484934 1 + T C UCEC 38484930 + 38484910 38484950 41 TGTCTTGAATTTTAGTTGAACAGTTTGATGTCGCAACTCAC TGTCTTGAATTTTAGTTGAACAGTCTGATGTCGCAACTCAC < 41bp 1 0.157707403270023 1 0.0698352754116058 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UTP11 ENSG00000183520 CDS Human protein_coding chr1:38484930 chr1:38484934 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_44411 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:38484826-38484982
64251 chr22 39125528 39125528 1 + C T UCEC 39125541 + 39125521 39125561 41 ATGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGA ATGCAGTTGACGAAAAAGGGCCCCCTGACGAAACGAGACGA < 41bp 1 0.0556682857353799 1 0.108709216117859 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125541 chr22:39125528 nonsynonymous SNV 0.971 1 8 hm5C_associated_SNPs_44415 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125528 39125528 1 + C T UCEC 39125542 + 39125522 39125562 41 TGCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG TGCAGTTGACGAAAAAGGGCCCCCTGACGAAACGAGACGAG < 41bp 1 0.0516013787768919 1 0.185302495956421 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125542 chr22:39125528 nonsynonymous SNV 0.971 1 7 hm5C_associated_SNPs_44416 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125528 39125528 1 + C T UCEC 39125543 + 39125523 39125563 41 GCAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG GCAGTTGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGG < 41bp 1 0.0291291298396811 1 0.193480223417282 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125543 chr22:39125528 nonsynonymous SNV 0.971 1 6 hm5C_associated_SNPs_44417 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125528 39125528 1 + C T UCEC 39125544 + 39125524 39125564 41 CAGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG CAGTTGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGG < 41bp 1 0.080893638117338 1 0.174072861671448 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125544 chr22:39125528 nonsynonymous SNV 0.971 1 5 hm5C_associated_SNPs_44418 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr22 39125528 39125528 1 + C T UCEC 39125545 + 39125525 39125565 41 AGTCGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG AGTTGACGAAAAAGGGCCCCCTGACGAAACGAGACGAGGGG < 41bp 1 0.16245738275498 1 0.377568662166595 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125545 chr22:39125528 nonsynonymous SNV 0.971 1 4 hm5C_associated_SNPs_44419 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39125484-39125532
64251 chr16 22237232 22237232 1 + G T UCEC 22237252 + 22237232 22237272 41 GCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGGTCC TCAACCTAACAAAAAGTGAGCGGTATAGCTCCAGCGGGTCC < 41bp 1 0.381868262515599 1 0.553581058979034 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EEF2K ENSG00000103319 CDS Human protein_coding chr16:22237252 chr16:22237232 nonsynonymous SNV 0.998 1 1 hm5C_associated_SNPs_44420 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:22237220-22237240
64251 chr4 37857279 37857279 1 + T C UCEC 37857261 + 37857241 37857281 41 AGTAAAAGCAGCCAAATGATCACCTTCACCTTTGCTAATGG AGTAAAAGCAGCCAAATGATCACCTTCACCTTTGCTAACGG < 41bp 1 0.704698194164063 1 0.303858995437622 experiment 0.590603611671874 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PGM2 ENSG00000169299 CDS Human protein_coding chr4:37857261 chr4:37857279 synonymous SNV . 0 39 hm5C_associated_SNPs_44421 0 0 2 YBX3 POSTAR2 ENCODE chr4:37857258-37857314
64251 chr7 99956632 99956632 1 + G T UCEC 99956624 + 99956604 99956644 41 ACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGG ACCAGTCTGTGTATTTCTGCCGAGTCGATCTGGACACCCGG < 41bp 1 0.55174079981179 1 0.730578780174255 experiment 0.896518400376421 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956624 chr7:99956632 nonsynonymous SNV 0.000 0 29 hm5C_associated_SNPs_44422 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chr7 99956632 99956632 1 + G T UCEC 99956638 + 99956618 99956658 41 TTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCA TTCTGCCGAGTCGATCTGGACACCCGGAGATCAGGGAGGCA < 41bp 1 0.299760467944694 1 0.0317302644252777 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PILRB ENSG00000121716 CDS Human protein_coding chr7:99956638 chr7:99956632 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_44423 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99956588-99956643
64251 chrX 73043360 73043360 1 - T C UCEC 73043361 - 73043341 73043381 41 GATTCATTTGATAAACAAAGCATCTTTTATGTGGAATATAC GATTCATTTGATAAACAAAGCGTCTTTTATGTGGAATATAC < 41bp 1 0.0519678644658784 1 0.0483934581279755 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043361 chrX:73043360 . . 0 22 hm5C_associated_SNPs_44424 0 0 50 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr3 25542789 25542789 1 + C A UCEC 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGATT < 41bp 1 0.21537272436118 1 0.0710446536540985 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542789 stopgain 1.000 1 39 hm5C_associated_SNPs_44427 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:25542765-25542798
64251 chr17 57918663 57918663 1 + A C UCEC 57918672 + 57918652 57918692 41 TTGACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGT TTGACTGTTGACTCTCATGGCAACACCAGTCGATGGGCTGT < 41bp 1 0.668150669351871 1 0.179440349340439 experiment 0.663698661296258 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918672 chr17:57918663 . . 0 12 hm5C_associated_SNPs_44428 0 0 35 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57918633-57918664
64251 chr17 57918663 57918663 1 + A C UCEC 57918675 + 57918655 57918695 41 ACTGTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTG ACTGTTGACTCTCATGGCAACACCAGTCGATGGGCTGTCTG < 41bp 1 0.785088071123818 1 0.290377110242844 experiment 0.429823857752363 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918675 chr17:57918663 . . 0 9 hm5C_associated_SNPs_44429 0 0 35 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57918633-57918664
64251 chr6 31602069 31602069 1 + A G UCEC 31602058 + 31602038 31602078 41 CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAG CTGGATTCTTGGGCTCTAAGCCTGAGGGCCCGGGCCCTCAG < 41bp 1 0.506333500521137 1 0.275240898132324 experiment 0.987332998957727 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602058 chr6:31602069 synonymous SNV . 0 32 hm5C_associated_SNPs_44431 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602059 + 31602039 31602079 41 TGGATTCTTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGG TGGATTCTTGGGCTCTAAGCCTGAGGGCCCGGGCCCTCAGG < 41bp 1 0.508767076827831 1 0.817206203937531 experiment 0.982465846344339 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602059 chr6:31602069 synonymous SNV . 0 31 hm5C_associated_SNPs_44432 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602066 + 31602046 31602086 41 TTGGGCTCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTC TTGGGCTCTAAGCCTGAGGGCCCGGGCCCTCAGGCAGAGTC < 41bp 1 0.360259788178611 1 0.493091762065887 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602066 chr6:31602069 synonymous SNV . 0 24 hm5C_associated_SNPs_44433 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602072 + 31602052 31602092 41 TCTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGA TCTAAGCCTGAGGGCCCGGGCCCTCAGGCAGAGTCCAGAGA < 41bp 1 0.137638330160281 1 0.0436141490936279 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602072 chr6:31602069 synonymous SNV . 0 18 hm5C_associated_SNPs_44434 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602073 + 31602053 31602093 41 CTAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGAT CTAAGCCTGAGGGCCCGGGCCCTCAGGCAGAGTCCAGAGAT < 41bp 1 0.281277589257661 1 0.100325286388397 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602073 chr6:31602069 synonymous SNV . 0 17 hm5C_associated_SNPs_44435 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602074 + 31602054 31602094 41 TAAGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATA TAAGCCTGAGGGCCCGGGCCCTCAGGCAGAGTCCAGAGATA < 41bp 1 0.380609914488213 1 0.123026043176651 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602074 chr6:31602069 synonymous SNV . 0 16 hm5C_associated_SNPs_44436 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602076 + 31602056 31602096 41 AGCCTGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACA AGCCTGAGGGCCCGGGCCCTCAGGCAGAGTCCAGAGATACA < 41bp 1 0.466257789770779 1 0.832018733024597 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602076 chr6:31602069 synonymous SNV . 0 14 hm5C_associated_SNPs_44437 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr6 31602069 31602069 1 + A G UCEC 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCGGGCCCTCAGGCAGAGTCCAGAGATACAGGCA < 41bp 1 0.449209213457156 1 0.824256181716919 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602069 synonymous SNV . 0 10 hm5C_associated_SNPs_44438 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31602021-31602088
64251 chr3 37367126 37367126 1 + T C UCEC 37367140 + 37367120 37367160 41 CTAGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAG CTAGGACTTCTCATTGTCAGCACCGTACAACTAAAGTTAAG < 41bp 1 0.282535718852797 1 0.196582466363907 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367140 chr3:37367126 nonsynonymous SNV 0.959 1 7 hm5C_associated_SNPs_44439 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37367085-37367143
64251 chr3 37367126 37367126 1 + T C UCEC 37367142 + 37367122 37367162 41 AGGATTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGA AGGACTTCTCATTGTCAGCACCGTACAACTAAAGTTAAGGA < 41bp 1 0.0508303090735674 1 0.211512625217438 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367142 chr3:37367126 nonsynonymous SNV 0.959 1 5 hm5C_associated_SNPs_44440 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37367085-37367143
64251 chr5 50058993 50058993 1 + T C UCEC 50059003 + 50058983 50059023 41 TGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAA TGAACTATGACGGGGAACTGCACAAGCACCCACAACTGGAA < 41bp 1 0.684679312245278 1 0.358957499265671 experiment 0.630641375509443 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PARP8 ENSG00000151883 CDS Human protein_coding chr5:50059003 chr5:50058993 synonymous SNV . 0 11 hm5C_associated_SNPs_44441 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:50058991-50059010
64251 chr15 93528744 93528744 1 + G T UCEC 93528742 + 93528722 93528762 41 TCTCAGGCTCAGACAAATGACAGTGACTCTGACACTGAGTC TCTCAGGCTCAGACAAATGACATTGACTCTGACACTGAGTC < 41bp 1 0.0798740599310239 1 0.0223695933818817 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHD2 ENSG00000173575 CDS Human protein_coding chr15:93528742 chr15:93528744 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_44442 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:93528734-93528759
64251 chr17 29683531 29683531 1 + C T UCEC 29683551 + 29683531 29683571 41 CAAGAAATGGAATCAGGGATCACAACACCCCCCAAAATGAG TAAGAAATGGAATCAGGGATCACAACACCCCCCAAAATGAG < 41bp 1 0.285015108331821 1 0.470875889062881 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NF1 ENSG00000196712 CDS Human protein_coding chr17:29683551 chr17:29683531 stopgain 1.000 1 1 hm5C_associated_SNPs_44443 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:29683530-29683531
64251 chr1 151538654 151538654 1 + C T UCEC 151538645 + 151538625 151538665 41 TTTTCTTTGAACAGGTGGTGCTAGAAAAGCCAAATGGCTTT TTTTCTTTGAACAGGTGGTGCTAGAAAAGTCAAATGGCTTT < 41bp 1 0.541847320620979 1 0.17065155506134 experiment 0.916305358758043 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TUFT1 ENSG00000143367 CDS Human protein_coding chr1:151538645 chr1:151538654 nonsynonymous SNV 0.998 0 30 hm5C_associated_SNPs_44445 0 0 1 DGCR8 POSTAR2 ENCODE chr1:151538638-151538669
64251 chr10 17277849 17277849 1 + T C UCEC 17277858 + 17277838 17277878 41 TTTATAGGATTTCTCTGCCTCTTCCAAACTTTTCCTCCCTG TTTATAGGATTCCTCTGCCTCTTCCAAACTTTTCCTCCCTG < 41bp 1 0.0838687607755544 1 0.647125363349915 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277858 chr10:17277849 nonsynonymous SNV 0.998 2 12 hm5C_associated_SNPs_44446 0 0 43 FUS POSTAR2 DRA001158,DRS012384 chr10:17277820-17277863
64251 chr3 38294331 38294331 1 + T C UCEC 38294312 + 38294292 38294332 41 TTTGTTTGGTTCTTAGGCATCTGGTGTCGAAGGCTCAGATA TTTGTTTGGTTCTTAGGCATCTGGTGTCGAAGGCTCAGACA < 41bp 1 0.596211624372551 1 0.448002398014069 experiment 0.807576751254899 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38294312 chr3:38294331 synonymous SNV . 0 40 hm5C_associated_SNPs_44447 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38294331-38294347
64251 chr10 112361866 112361866 1 + A G UCEC 112361869 + 112361849 112361889 41 GTTAGATAGGGGTTACAAATCAATCATGGAACTGATGAATG GTTAGATAGGGGTTACAGATCAATCATGGAACTGATGAATG < 41bp 1 0.213378074679281 1 0.0926706194877625 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361869 chr10:112361866 nonsynonymous SNV 0.954 2 18 hm5C_associated_SNPs_44449 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:112361840-112361880
64251 chr6 42975955 42975955 1 + G A UCEC 42975958 + 42975938 42975978 41 GGTTCATCTACGAGACGGAGCATCACAACGGGATTGCTGAG GGTTCATCTACGAGACGAAGCATCACAACGGGATTGCTGAG < 41bp 1 0.397253467756598 1 0.0768393278121948 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PPP2R5D ENSG00000112640 CDS Human protein_coding chr6:42975958 chr6:42975955 nonsynonymous SNV 0.959 4 18 hm5C_associated_SNPs_44450 0 0 3 EFTUD2 POSTAR2 ENCODE chr6:42975918-42975974
64251 chr14 89075645 89075645 1 + T C UCEC 89075656 + 89075636 89075676 41 GAAAAATGTTTGTTTGTTCACCCAAATTGTAAATATGATGC GAAAAATGTCTGTTTGTTCACCCAAATTGTAAATATGATGC < 41bp 1 0.467443342334754 1 0.0506678223609924 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89075656 chr14:89075645 synonymous SNV . 0 10 hm5C_associated_SNPs_44463 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:89075614-89075752
64251 chr6 30547710 30547710 1 + C T UCEC 30547729 + 30547709 30547749 41 CCGTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG CTGTATCTGAGGAACAGCAGCCTGCACTCAAGGGCAAAAAG < 41bp 1 0.0653218577746449 1 0.0978022813796997 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30547729 chr6:30547710 synonymous SNV . 0 2 hm5C_associated_SNPs_44464 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr6:30547674-30547725
64251 chr20 42089371 42089371 1 + C T UCEC 42089358 + 42089338 42089378 41 TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCG TCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCATGTTCTCG < 41bp 1 0.450620460442912 1 0.320768713951111 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089358 chr20:42089371 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_44466 0 0 9 EFTUD2 POSTAR2 ENCODE chr20:42089287-42089372
64251 chr11 61404692 61404692 1 + T C UCEC 61404674 + 61404654 61404694 41 GAGCCAGTGAAGCCACGCTGCTGACCATGCTCAACATCTCC GAGCCAGTGAAGCCACGCTGCTGACCATGCTCAACATCCCC < 41bp 1 0.222737922579915 1 0.131803542375565 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404674 chr11:61404692 . . 0 39 hm5C_associated_SNPs_44468 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr11 61404692 61404692 1 + T C UCEC 61404700 + 61404680 61404720 41 ATGCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCA ATGCTCAACATCCCCCCCTTCTCCTCTGGGCTGGTCATCCA < 41bp 1 0.486585979706815 1 0.812409043312073 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404700 chr11:61404692 . . 0 13 hm5C_associated_SNPs_44469 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr11 61404692 61404692 1 + T C UCEC 61404702 + 61404682 61404722 41 GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGC GCTCAACATCCCCCCCTTCTCCTCTGGGCTGGTCATCCAGC < 41bp 1 0.181330043199169 1 0.05107381939888 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404702 chr11:61404692 . . 0 11 hm5C_associated_SNPs_44470 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:61404679-61404715
64251 chr19 30500184 30500184 1 + A G UCEC 30500196 + 30500176 30500216 41 TGGTGATAACGACCATGAGGCTTTAGGGGTTGGAGATAATT TGGTGATAGCGACCATGAGGCTTTAGGGGTTGGAGATAATT < 41bp 1 0.281249484113206 1 0.12163981795311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30500196 chr19:30500184 nonsynonymous SNV 0.018 0 9 hm5C_associated_SNPs_44471 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:30500144-30500201
64251 chr1 198233295 198233295 1 + T C UCEC 198233296 + 198233276 198233316 41 ATAAAATATTATGCATCATTCATTGAAGATAATGAACTAAA ATAAAATATTATGCATCATCCATTGAAGATAATGAACTAAA < 41bp 1 0.0949438224529873 1 0.439428567886353 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NEK7 ENSG00000151414 CDS Human protein_coding chr1:198233296 chr1:198233295 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_44473 0 0 4 WDR33 POSTAR2 GSE61123,GSM1496985 chr1:198233270-198233299
64251 chr14 70235555 70235555 1 + A G UCEC 70235540 + 70235520 70235560 41 CTATTGAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGT CTATTGAACATGCTAGGGCTCGGTCACGAGGTGGAGGAGGT < 41bp 1 0.182081773885974 1 0.255148589611053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235540 chr14:70235555 nonsynonymous SNV 1.000 0 36 hm5C_associated_SNPs_44474 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:70235486-70235599
64251 chr20 32665012 32665012 1 + C T UCEC 32664995 + 32664975 32665015 41 GCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGAT GCCTGCCCCAGGGGGAAGCACGGACCCGAGACGACGGTGAT < 41bp 1 0.387177096645043 1 0.72720742225647 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664995 chr20:32665012 synonymous SNV . 0 38 hm5C_associated_SNPs_44475 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665012 32665012 1 + C T UCEC 32664999 + 32664979 32665019 41 GCCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGG GCCCCAGGGGGAAGCACGGACCCGAGACGACGGTGATGAGG < 41bp 1 0.776788029387701 1 0.503162741661072 experiment 0.446423941224598 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32664999 chr20:32665012 synonymous SNV . 0 34 hm5C_associated_SNPs_44476 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665012 32665012 1 + C T UCEC 32665000 + 32664980 32665020 41 CCCCAGGGGGAAGCACGGACCCGAGACGACGGCGATGAGGA CCCCAGGGGGAAGCACGGACCCGAGACGACGGTGATGAGGA < 41bp 1 0.352804870305256 1 0.583639800548553 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665000 chr20:32665012 synonymous SNV . 0 33 hm5C_associated_SNPs_44477 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665012 32665012 1 + C T UCEC 32665025 + 32665005 32665045 41 ACGACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAA ACGACGGTGATGAGGAAGGGCTCCTGACACACAGCGAGGAA < 41bp 1 0.579881519104342 1 0.19310387969017 experiment 0.840236961791317 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665025 chr20:32665012 synonymous SNV . 0 8 hm5C_associated_SNPs_44478 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr20 32665012 32665012 1 + C T UCEC 32665027 + 32665007 32665047 41 GACGGCGATGAGGAAGGGCTCCTGACACACAGCGAGGAAGA GACGGTGATGAGGAAGGGCTCCTGACACACAGCGAGGAAGA < 41bp 1 0.542347618782042 1 0.109713464975357 experiment 0.915304762435917 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALY ENSG00000125970 CDS Human protein_coding chr20:32665027 chr20:32665012 synonymous SNV . 0 6 hm5C_associated_SNPs_44479 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32665000-32665032
64251 chr15 22962526 22962526 1 + T C UCEC 22962534 + 22962514 22962554 41 GCTACGAGACGCTGCTGAAGCAGAGGCATGTGCAGGTGAGC GCTACGAGACGCCGCTGAAGCAGAGGCATGTGCAGGTGAGC < 41bp 1 0.704260573575885 1 0.833437442779541 experiment 0.59147885284823 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22962534 chr15:22962526 nonsynonymous SNV . 0 13 hm5C_associated_SNPs_44480 0 0 5 FMR1 POSTAR2 ENCODE chr15:22962477-22962549
64251 chr16 4498839 4498839 1 + C T UCEC 4498845 + 4498825 4498865 41 TCCACATCAAGATACGAGTTCCAAAGTAAGTGCCCCCTAGG TCCACATCAAGATATGAGTTCCAAAGTAAGTGCCCCCTAGG < 41bp 1 0.378657677609107 1 0.290245622396469 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJA3 ENSG00000103423 CDS Human protein_coding chr16:4498845 chr16:4498839 stopgain 0.985 1 15 hm5C_associated_SNPs_44481 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:4498807-4498840
64251 chr16 67315516 67315516 1 + C T UCEC 67315518 + 67315498 67315538 41 TGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCC TGCTGCTAGTGGGAAGCATGCTGCTGAAGGAAGTGCCTTCC < 41bp 1 0.517089169830638 1 0.16764509677887 experiment 0.965821660338724 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67315518 chr16:67315516 nonsynonymous SNV 0.288 0 19 hm5C_associated_SNPs_44482 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67315494-67315552
64251 chr17 7214407 7214407 1 + T C UCEC 7214415 + 7214395 7214435 41 CAACTCATAATATGGATGTCCCCAACATCAAAAGGAATGAC CAACTCATAATACGGATGTCCCCAACATCAAAAGGAATGAC < 41bp 1 0.24333714949291 1 0.112840831279755 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214415 chr17:7214407 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_44483 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr17 7214407 7214407 1 + T C UCEC 7214416 + 7214396 7214436 41 AACTCATAATATGGATGTCCCCAACATCAAAAGGAATGACT AACTCATAATACGGATGTCCCCAACATCAAAAGGAATGACT < 41bp 1 0.0603587523123711 1 0.151366025209427 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214416 chr17:7214407 nonsynonymous SNV 1.000 2 12 hm5C_associated_SNPs_44484 0 0 1 YBX3 POSTAR2 ENCODE chr17:7214389-7214435
64251 chr2 170804141 170804141 1 + T C UCEC 170804126 + 170804106 170804146 41 TTAGTGTCAAACATGCGACACTTTATAAACTATGTTAGAGT TTAGTGTCAAACATGCGACACTTTATAAACTATGTCAGAGT < 41bp 1 0.0843020984404648 1 0.0685591399669647 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBR3 ENSG00000144357 CDS Human protein_coding chr2:170804126 chr2:170804141 synonymous SNV . 0 36 hm5C_associated_SNPs_44487 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:170804121-170804163
64251 chrX 70510550 70510550 1 + A G UCEC 70510542 + 70510522 70510562 41 AAAACCATACTCCAAGAAAGCATCATCAACATCACCACCAG AAAACCATACTCCAAGAAAGCATCATCAGCATCACCACCAG < 41bp 1 0.545287033387371 1 0.108000129461288 experiment 0.909425933225258 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70510542 chrX:70510550 synonymous SNV . 0 29 hm5C_associated_SNPs_44488 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:70510520-70510580
64251 chrX 51641240 51641240 1 + C A UCEC 51641235 + 51641215 51641255 41 AAGACACACCCAAGCTCGGTCTCCTCTTGGTGATTCTGGGT AAGACACACCCAAGCTCGGTCTCCTATTGGTGATTCTGGGT < 41bp 1 0.219308299982675 1 0.574397444725037 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51641235 chrX:51641240 synonymous SNV . 0 26 hm5C_associated_SNPs_44489 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:51641229-51641253
64251 chr12 112321488 112321488 1 + G A UCEC 112321470 + 112321450 112321490 41 CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCGAA CTCCAAACACCACAGCCGGACTATCCCAAAGGATATGCAAA < 41bp 1 0.0332164191573055 1 0.060117244720459 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPKAPK5 ENSG00000089022 CDS Human protein_coding chr12:112321470 chr12:112321488 nonsynonymous SNV 0.997 3 39 hm5C_associated_SNPs_44491 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:112321465-112321514
64251 chrX 73043524 73043524 1 - T A UCEC 73043508 - 73043488 73043528 41 GAGGAGATGGAAAATTTTTGCAAAAAACAAGGTGTTGTGGT GAGGTGATGGAAAATTTTTGCAAAAAACAAGGTGTTGTGGT < 41bp 1 0.296360269921903 1 0.566891431808472 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043508 chrX:73043524 . . 0 5 hm5C_associated_SNPs_44492 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chrX 73043524 73043524 1 - T A UCEC 73043534 - 73043514 73043554 41 GAAGATACATGCTTCCTGGCCTGATTGAGGAGATGGAAAAT GAAGATACATGCTTCCTGGCCTGATTGAGGTGATGGAAAAT < 41bp 1 0.0764556440879931 1 0.167967051267624 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043534 chrX:73043524 . . 0 31 hm5C_associated_SNPs_44493 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr2 102472581 102472581 1 + G T UCEC 102472562 + 102472542 102472582 41 AAGAAGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGAGG AAGAAGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGATG < 41bp 1 0.567048662330638 1 0.66192889213562 experiment 0.865902675338723 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102472562 chr2:102472581 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_44494 0 0 24 AARS POSTAR2 ENCODE chr2:102472512-102472584
64251 chr2 102472581 102472581 1 + G T UCEC 102472566 + 102472546 102472586 41 AGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGAGGAGAG AGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGATGAGAG < 41bp 1 0.674726375984026 1 0.569165825843811 experiment 0.650547248031947 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102472566 chr2:102472581 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_44495 0 0 24 AARS POSTAR2 ENCODE chr2:102472512-102472584
64251 chr8 145065430 145065430 1 + C T UCEC 145065439 + 145065419 145065459 41 TCTGGGGACAACTATCCTCCCCCCAACCCTGGATATCCGGG TCTGGGGACAATTATCCTCCCCCCAACCCTGGATATCCGGG < 41bp 1 0.343806387555366 1 0.354492425918579 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065439 chr8:145065430 synonymous SNV . 0 12 hm5C_associated_SNPs_44496 0 0 23 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:145065403-145065439
64251 chr17 78022545 78022545 1 + T G UCEC 78022532 + 78022512 78022552 41 GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACC GGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTGTTGGACC < 41bp 1 0.228666807709916 1 0.372912228107452 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022532 chr17:78022545 synonymous SNV . 0 34 hm5C_associated_SNPs_44499 0 0 1 PPIG POSTAR2 ENCODE chr17:78022382-78022564
64251 chr5 7897298 7897298 1 + G A UCEC 7897284 + 7897264 7897304 41 AAGCCCCAGCAAAGTATGTGCAAGACAACATCCAGCTTCAT AAGCCCCAGCAAAGTATGTGCAAGACAACATCCAACTTCAT < 41bp 1 0.661192812426538 1 0.0973699986934662 experiment 0.677614375146924 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7897284 chr5:7897298 synonymous SNV . 0 35 hm5C_associated_SNPs_44500 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:7897287-7897313
64251 chr6 31599576 31599576 1 + T C UCEC 31599589 + 31599569 31599609 41 GGACCTATGGGGGACGAGGGCGGGGAGCCCGAAGCCGGGAA GGACCTACGGGGGACGAGGGCGGGGAGCCCGAAGCCGGGAA < 41bp 1 0.694268747700094 1 0.923179388046265 experiment 0.611462504599812 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31599589 chr6:31599576 synonymous SNV . 0 8 hm5C_associated_SNPs_44501 0 0 43 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31599492-31599584
64251 chr8 56699510 56699510 1 + T C UCEC 56699490 + 56699470 56699510 41 CCTGTACAAGTCATGATGGTCATCAACAGCTAAGTGAAGTT CCTGTACAAGTCATGATGGTCATCAACAGCTAAGTGAAGTC < 41bp 1 0.513817696709072 1 0.233143389225006 experiment 0.972364606581856 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699490 chr8:56699510 synonymous SNV . 0 41 hm5C_associated_SNPs_44502 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:56699500-56699520
64251 chr11 73074836 73074836 1 + A G UCEC 73074840 + 73074820 73074860 41 ATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGCGGC ATCCGTGACCGCAGGAGCAGCATGAAGCTCCAGCATGCGGC < 41bp 1 0.347115840214989 1 0.206224769353867 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73074840 chr11:73074836 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_44503 0 0 1 GRWD1 POSTAR2 ENCODE chr11:73074798-73074863
64251 chr7 106797468 106797468 1 + G T UCEC 106797463 + 106797443 106797483 41 TTCTTTTTTCATTGTAGAATCTGGAGAAGTGAAAATTACTA TTCTTTTTTCATTGTAGAATCTGGATAAGTGAAAATTACTA < 41bp 1 0.756775436850137 1 0.696891069412231 experiment 0.486449126299726 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106797463 chr7:106797468 stopgain 1.000 1 26 hm5C_associated_SNPs_44504 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr7:106797441-106797471
64251 chr19 42373183 42373183 1 + C T UCEC 42373186 + 42373166 42373206 41 GGGGGACGTCAGAGAAACGGCGTCATGCCCAGCCACTTCAG GGGGGACGTCAGAGAAATGGCGTCATGCCCAGCCACTTCAG < 41bp 1 0.76744940058427 1 0.652410268783569 experiment 0.465101198831461 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373186 chr19:42373183 nonsynonymous SNV 0.992 1 18 hm5C_associated_SNPs_44505 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373183 42373183 1 + C T UCEC 42373193 + 42373173 42373213 41 GTCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGC GTCAGAGAAATGGCGTCATGCCCAGCCACTTCAGCCGAGGC < 41bp 1 0.29683130708873 1 0.126034915447235 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373193 chr19:42373183 nonsynonymous SNV 0.992 1 11 hm5C_associated_SNPs_44506 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373183 42373183 1 + C T UCEC 42373194 + 42373174 42373214 41 TCAGAGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCT TCAGAGAAATGGCGTCATGCCCAGCCACTTCAGCCGAGGCT < 41bp 1 0.257710013195658 1 0.15303510427475 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373194 chr19:42373183 nonsynonymous SNV 0.992 1 10 hm5C_associated_SNPs_44507 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373183 42373183 1 + C T UCEC 42373198 + 42373178 42373218 41 AGAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAA AGAAATGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAA < 41bp 1 0.170266940487312 1 0.296389311552048 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373198 chr19:42373183 nonsynonymous SNV 0.992 1 6 hm5C_associated_SNPs_44508 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr19 42373183 42373183 1 + C T UCEC 42373199 + 42373179 42373219 41 GAAACGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAG GAAATGGCGTCATGCCCAGCCACTTCAGCCGAGGCTCCAAG < 41bp 1 0.220880991653195 1 0.285202711820602 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373199 chr19:42373183 nonsynonymous SNV 0.992 1 5 hm5C_associated_SNPs_44509 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr9 33366685 33366685 1 + T C UCEC 33366677 + 33366657 33366697 41 CCTCCCATGAACAGAGACCACCGCCGGATCATCCATGACTT CCTCCCATGAACAGAGACCACCGCCGGACCATCCATGACTT < 41bp 1 0.271605909552643 1 0.294218838214874 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33366677 chr9:33366685 nonsynonymous SNV 0.999 1 29 hm5C_associated_SNPs_44510 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33366662-33366686
64251 chr1 147091668 147091668 1 + A G UCEC 147091688 + 147091668 147091708 41 AAACTCTGAAATGGAAGGGCCGAATGTCCCCAACCCTGCAT GAACTCTGAAATGGAAGGGCCGAATGTCCCCAACCCTGCAT < 41bp 1 0.226323060602611 1 0.152979910373688 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091688 chr1:147091668 nonsynonymous SNV 0.998 0 1 hm5C_associated_SNPs_44511 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:147091660-147091680
64251 chr1 53420455 53420455 1 + T C UCEC 53420465 + 53420445 53420485 41 AGAAGATGAGTAAGGGAAGCCTTGGAATAAAAGTGAGTGTT AGAAGATGAGCAAGGGAAGCCTTGGAATAAAAGTGAGTGTT < 41bp 1 0.389679932793735 1 0.225809842348099 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCP2 ENSG00000116171 CDS Human protein_coding chr1:53420465 chr1:53420455 synonymous SNV . 0 11 hm5C_associated_SNPs_44512 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:53420446-53420468
64251 chr17 7479876 7479876 1 + T C UCEC 7479871 + 7479851 7479891 41 GTGGTCATGGCACTAGGAGACTACATGGGCGCCTCCTGTCA GTGGTCATGGCACTAGGAGACTACACGGGCGCCTCCTGTCA < 41bp 1 0.743867571199737 1 0.847370743751526 experiment 0.512264857600526 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479871 chr17:7479876 nonsynonymous SNV 0.997 2 26 hm5C_associated_SNPs_44514 0 0 49 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479876 7479876 1 + T C UCEC 7479886 + 7479866 7479906 41 GGAGACTACATGGGCGCCTCCTGTCACGCCTGTATCGGGGG GGAGACTACACGGGCGCCTCCTGTCACGCCTGTATCGGGGG < 41bp 1 0.176379893118058 1 0.29585736989975 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479886 chr17:7479876 nonsynonymous SNV 0.997 2 11 hm5C_associated_SNPs_44515 0 0 49 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479876 7479876 1 + T C UCEC 7479892 + 7479872 7479912 41 TACATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA TACACGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAA < 41bp 1 0.688891605817873 1 0.1119344830513 experiment 0.622216788364254 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479892 chr17:7479876 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_44516 0 0 49 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr17 7479876 7479876 1 + T C UCEC 7479895 + 7479875 7479915 41 ATGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT ACGGGCGCCTCCTGTCACGCCTGTATCGGGGGCACCAACGT < 41bp 1 0.571021315134376 1 0.298053413629532 experiment 0.857957369731247 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479895 chr17:7479876 nonsynonymous SNV 0.997 2 2 hm5C_associated_SNPs_44517 0 0 49 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr5 139892987 139892987 1 + G A UCEC 139893005 + 139892985 139893025 41 TTGTGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG TTATGAAGGCTAAAGACCAGCAAGCTGCAGAAGCAAATAAG < 41bp 1 0.169299060593846 1 0.407388538122177 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139893005 chr5:139892987 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_44518 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:139892980-139893002
64251 chr2 120005522 120005522 1 + G A UCEC 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCATGGTCAAC < 41bp 1 0.291856228321795 1 0.0129623413085938 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005522 nonsynonymous SNV 0.987 2 33 hm5C_associated_SNPs_44519 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr2 102472563 102472563 1 + G A UCEC 102472562 + 102472542 102472582 41 AAGAAGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGAGG AAGAAGAAGAGGAGAGGAGACAGGCAGAAGAAGAAAAGAGG < 41bp 1 0.502970451480264 1 0.556477963924408 experiment 0.994059097039472 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102472562 chr2:102472563 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_44520 0 0 25 AARS POSTAR2 ENCODE chr2:102472512-102472584
64251 chr2 102472563 102472563 1 + G A UCEC 102472566 + 102472546 102472586 41 AGAAGAGGAGAGGAGACGGGCAGAAGAAGAAAAGAGGAGAG AGAAGAGGAGAGGAGACAGGCAGAAGAAGAAAAGAGGAGAG < 41bp 1 0.778698134617897 1 0.694413661956787 experiment 0.442603730764205 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102472566 chr2:102472563 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_44521 0 0 25 AARS POSTAR2 ENCODE chr2:102472512-102472584
64251 chr8 28906561 28906561 1 + A G UCEC 28906541 + 28906521 28906561 41 CACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGA CACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGG < 41bp 1 0.758710878728762 1 0.37006551027298 experiment 0.482578242542477 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906541 chr8:28906561 nonsynonymous SNV 0.987 4 41 hm5C_associated_SNPs_44524 0 0 9 MTPAP POSTAR2 ENCODE chr8:28906505-28906567
64251 chr8 28906561 28906561 1 + A G UCEC 28906553 + 28906533 28906573 41 GATGATGTCGACGGGAATGACTACTCTGAGCAGGTGAGCCC GATGATGTCGACGGGAATGACTACTCTGGGCAGGTGAGCCC < 41bp 1 0.692941925890485 1 0.378070592880249 experiment 0.61411614821903 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906553 chr8:28906561 nonsynonymous SNV 0.987 4 29 hm5C_associated_SNPs_44525 0 0 9 MTPAP POSTAR2 ENCODE chr8:28906505-28906567
64251 chr2 220099777 220099777 1 + C A UCEC 220099770 + 220099750 220099790 41 ACAGTCATCCCAGGCAGTTGCTGCCCCCTTGGGCCCTTTGC ACAGTCATCCCAGGCAGTTGCTGCCCCATTGGGCCCTTTGC < 41bp 1 0.636131811584922 1 0.121031910181046 experiment 0.727736376830155 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220099770 chr2:220099777 synonymous SNV . 0 28 hm5C_associated_SNPs_44526 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:220099777-220099778
64251 chr16 842515 842515 1 + C A UCEC 842525 + 842505 842545 41 CCGGCTGTGCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGA CCGGCTGTGCATTCGGGAGGCGGCCGACGGCGCCGGGCAGA < 41bp 1 0.532767479508809 1 0.665794968605042 experiment 0.934465040982381 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842525 chr16:842515 nonsynonymous SNV 0.001 1 11 hm5C_associated_SNPs_44527 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr2 39008967 39008967 1 + G A UCEC 39008951 + 39008931 39008971 41 CTATAGACCCACCATATGGTCCAGAAAATTGCAGCAGCTCT CTATAGACCCACCATATGGTCCAGAAAATTGCAGCAACTCT < 41bp 1 0.505782303938213 1 0.152529060840607 experiment 0.988435392123574 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39008951 chr2:39008967 nonsynonymous SNV 0.998 4 37 hm5C_associated_SNPs_44528 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:39008943-39008974
64251 chr21 34787291 34787291 1 + G A UCEC 34787311 + 34787291 34787331 41 GCACGAGGCCTGTTGTCTACCAAGTGCAGTTTAAATAGTAA ACACGAGGCCTGTTGTCTACCAAGTGCAGTTTAAATAGTAA < 41bp 1 0.549158109138357 1 0.5376296043396 experiment 0.901683781723286 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34787311 chr21:34787291 nonsynonymous SNV 0.000 1 1 hm5C_associated_SNPs_44529 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:34787280-34787300
64251 chr1 200730053 200730053 1 + C A UCEC 200730036 + 200730016 200730056 41 CCAGGAACACATCAAACCACCTGTTGTTAATTTGCTTCTAT CCAGGAACACATCAAACCACCTGTTGTTAATTTGCTTATAT < 41bp 1 0.188615242782922 1 0.0576754510402679 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200730036 chr1:200730053 nonsynonymous SNV 0.998 4 38 hm5C_associated_SNPs_44530 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:200730041-200730059
64251 chr12 51117075 51117075 1 + C T UCEC 51117087 + 51117067 51117107 41 CCTCACGGCCACGCTGCCCACTGTCCGAATGATTGTTGATG CCTCACGGTCACGCTGCCCACTGTCCGAATGATTGTTGATG < 41bp 1 0.112998551820745 1 0.0541536211967468 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51117087 chr12:51117075 nonsynonymous SNV 0.615 2 9 hm5C_associated_SNPs_44531 0 0 2 FXR2 POSTAR2 ENCODE chr12:51117018-51117079
64251 chr11 61404722 61404722 1 + C T UCEC 61404702 + 61404682 61404722 41 GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGC GCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGT < 41bp 1 0.155073128648704 1 0.204511612653732 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404702 chr11:61404722 . . 0 41 hm5C_associated_SNPs_44532 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:61404689-61404745
64251 chr16 705356 705356 1 + G A UCEC 705347 + 705327 705367 41 GCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGTGCTGCGT GCAGTGTGCGGCTCTGGCGGCTGCGTGGCAGGGTGCTGCGT < 41bp 1 0.480967694991231 1 0.306684136390686 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control WDR90 ENSG00000161996 CDS Human protein_coding chr16:705347 chr16:705356 nonsynonymous SNV 0.000 0 30 hm5C_associated_SNPs_44533 0 0 3 PPIG POSTAR2 ENCODE chr16:705306-705371
64251 chr12 56537032 56537032 1 + T C UCEC 56537025 + 56537005 56537045 41 ACCCCAGGTTTGAGTGGGAACTCCCCCTGGATGAGGCCCAG ACCCCAGGTTTGAGTGGGAACTCCCCCCGGATGAGGCCCAG < 41bp 1 0.30223262669321 1 0.578854084014893 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56537025 chr12:56537032 nonsynonymous SNV 0.940 2 28 hm5C_associated_SNPs_44534 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56537016-56537047
64251 chr20 57289644 57289644 1 + C T UCEC 57289631 + 57289611 57289651 41 CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGCTGGCCTC CCTAGGACCGAGACAACAGCCCCAGCTCCTGTGTTGGCCTC < 41bp 1 0.402359525486397 1 0.477839171886444 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NPEPL1 ENSG00000215440 CDS Human protein_coding chr20:57289631 chr20:57289644 nonsynonymous SNV 0.993 4 34 hm5C_associated_SNPs_44536 0 0 3 GRWD1 POSTAR2 ENCODE chr20:57289633-57289721
64251 chr21 45876550 45876550 1 + G A UCEC 45876551 + 45876531 45876571 41 GGCACCGTGCGCCCACCTCGCCCCTCGCTCCTGCTGGTCTC GGCACCGTGCGCCCACCTCACCCCTCGCTCCTGCTGGTCTC < 41bp 1 0.393656558039138 1 0.382919609546661 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876551 chr21:45876550 nonsynonymous SNV 0.013 0 20 hm5C_associated_SNPs_44537 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr21:45876522-45876563
64251 chr10 112361863 112361863 1 + A G UCEC 112361869 + 112361849 112361889 41 GTTAGATAGGGGTTACAAATCAATCATGGAACTGATGAATG GTTAGATAGGGGTTGCAAATCAATCATGGAACTGATGAATG < 41bp 1 0.279865455492395 1 0.147938370704651 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361869 chr10:112361863 nonsynonymous SNV 0.949 1 15 hm5C_associated_SNPs_44538 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:112361840-112361880
64251 chr8 143816793 143816793 1 + A G UCEC 143816777 + 143816757 143816797 41 AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAACGAG AGCTGCCCGCTGATCTGCAGCACTGGATCTCCTACAGCGAG < 41bp 1 0.276888894839107 1 0.173095285892487 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THEM6 ENSG00000130193 CDS Human protein_coding chr8:143816777 chr8:143816793 nonsynonymous SNV 0.796 2 37 hm5C_associated_SNPs_44539 0 0 3 RPS3 POSTAR2 ENCODE chr8:143816750-143816797
64251 chr7 104717810 104717810 1 + C G UCEC 104717824 + 104717804 104717844 41 GATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAG GATGCAGTTATCATTGAATACAGAGGGAAGTTTATGCTGAG < 41bp 1 0.558179622235683 1 0.772397756576538 experiment 0.883640755528634 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2E ENSG00000005483 CDS Human protein_coding chr7:104717824 chr7:104717810 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_44541 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:104717787-104717863
64251 chr19 42373817 42373817 1 + C G UCEC 42373808 + 42373788 42373828 41 CAGGGACAAAGAGATCTGGACAGAATCGCCGGACAGGTAAG CAGGGACAAAGAGATCTGGACAGAATCGCGGGACAGGTAAG < 41bp 1 0.588943683029656 1 0.263968706130981 experiment 0.822112633940687 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373808 chr19:42373817 synonymous SNV . 0 30 hm5C_associated_SNPs_44542 0 0 48 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:42373760-42373820
64251 chr11 58379202 58379202 1 + C A UCEC 58379204 + 58379184 58379224 41 TTAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAAT TTAGAGAGGATGAGGAACATCCAAGGAAGTGAGTAGGCAAT < 41bp 1 0.253704296480342 1 0.418588906526566 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379204 chr11:58379202 nonsynonymous SNV 0.998 3 19 hm5C_associated_SNPs_44544 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr11 58379202 58379202 1 + C A UCEC 58379205 + 58379185 58379225 41 TAGAGAGGATGAGGAACCTCCAAGGAAGTGAGTAGGCAATT TAGAGAGGATGAGGAACATCCAAGGAAGTGAGTAGGCAATT < 41bp 1 0.678510593892549 1 0.468381643295288 experiment 0.642978812214901 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58379205 chr11:58379202 nonsynonymous SNV 0.998 3 18 hm5C_associated_SNPs_44545 0 0 23 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58379180-58379204
64251 chr22 31673087 31673087 1 + C A UCEC 31673093 + 31673073 31673113 41 CTGCTGGACAAGATCCGGGCCATGCAGAAGCTGAGCACACC CTGCTGGACAAGATACGGGCCATGCAGAAGCTGAGCACACC < 41bp 1 0.0632283338237268 1 0.0333158075809479 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31673093 chr22:31673087 synonymous SNV . 0 15 hm5C_associated_SNPs_44546 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:31673076-31673092
64251 chr19 9939272 9939272 1 + G A UCEC 9939290 + 9939270 9939310 41 CGGATGATACCATCGGGGACCTTAAGAAGCTGATTGCAGCC CGAATGATACCATCGGGGACCTTAAGAAGCTGATTGCAGCC < 41bp 1 0.419805200738568 1 0.130843073129654 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBL5 ENSG00000198258 CDS Human protein_coding chr19:9939290 chr19:9939272 nonsynonymous SNV 0.975 1 3 hm5C_associated_SNPs_44547 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:9939268-9939343
64251 chr19 49685863 49685863 1 + A T UCEC 49685868 + 49685848 49685888 41 AAGCTTCCCTCATGGACGCCCTGCTGAATGACCGGCCTGAG AAGCTTCCCTCATGGTCGCCCTGCTGAATGACCGGCCTGAG < 41bp 1 0.386898080141795 1 0.168413579463959 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49685868 chr19:49685863 nonsynonymous SNV 0.994 4 16 hm5C_associated_SNPs_44548 0 0 1 YBX3 POSTAR2 ENCODE chr19:49685699-49685907
64251 chr1 162470029 162470029 1 + G T UCEC 162470019 + 162469999 162470039 41 CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT CTCATTGACTTTGGACTTAGCTTCAAAGAATGCAATCAGGT < 41bp 1 0.376563701615415 1 0.135961204767227 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470019 chr1:162470029 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_44551 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469904-162470036
64251 chr5 173380238 173380238 1 + G A UCEC 173380246 + 173380226 173380266 41 CTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATA CTATCAGTGCCCACTTTGTTCAGCTGCAGCATGGAGAGATA < 41bp 1 0.492697852435594 1 0.405221492052078 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173380246 chr5:173380238 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_44552 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:173380220-173380243
64251 chr1 36755112 36755112 1 + A G UCEC 36755116 + 36755096 36755136 41 GGAGTCTTTCCCAGAGAGATCCAAAAAGGAAGATCGGGGCA GGAGTCTTTCCCAGAGGGATCCAAAAAGGAAGATCGGGGCA < 41bp 1 0.407554808584251 1 0.436039626598358 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755116 chr1:36755112 nonsynonymous SNV 0.994 3 17 hm5C_associated_SNPs_44553 0 0 9 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:36755100-36755120
64251 chr6 36566723 36566723 1 + G T UCEC 36566703 + 36566683 36566723 41 AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAG AAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAT < 41bp 1 0.715184278544407 1 0.277258336544037 experiment 0.569631442911186 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566703 chr6:36566723 nonsynonymous SNV 1.000 2 41 hm5C_associated_SNPs_44554 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:36566620-36566740
64251 chr17 37360836 37360836 1 + C T UCEC 37360816 + 37360796 37360836 41 CAGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGC CAGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGT < 41bp 1 0.390213321080355 1 0.172549158334732 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360816 chr17:37360836 nonsynonymous SNV 0.998 2 41 hm5C_associated_SNPs_44556 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360836 37360836 1 + C T UCEC 37360820 + 37360800 37360840 41 TCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGCCT TCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGTGCCT < 41bp 1 0.603302867075599 1 0.696558713912964 experiment 0.793394265848801 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360820 chr17:37360836 nonsynonymous SNV 0.998 2 37 hm5C_associated_SNPs_44557 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr17 37360836 37360836 1 + C T UCEC 37360846 + 37360826 37360866 41 CCGTGAAGAGCGCCTCCAGGCCAAGAAGGAGGAGATCATCA CCGTGAAGAGTGCCTCCAGGCCAAGAAGGAGGAGATCATCA < 41bp 1 0.334872448274561 1 0.252057641744614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360846 chr17:37360836 nonsynonymous SNV 0.998 2 11 hm5C_associated_SNPs_44558 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360780-37360940
64251 chr1 109804151 109804151 1 + C T UCEC 109804156 + 109804136 109804176 41 TTTGCCACAAAGGAGCGCGACGGGTTGCTGTTGTACAATGG TTTGCCACAAAGGAGTGCGACGGGTTGCTGTTGTACAATGG < 41bp 1 0.275319183160646 1 0.42434698343277 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109804156 chr1:109804151 nonsynonymous SNV 0.773 3 16 hm5C_associated_SNPs_44560 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:109804139-109804175
64251 chr1 206902151 206902151 1 + A T UCEC 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGTATCT < 41bp 1 0.496873128713151 1 0.229875057935715 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902151 nonsynonymous SNV 0.996 3 37 hm5C_associated_SNPs_44561 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:206902123-206902184
64251 chr20 62305418 62305418 1 + G A UCEC 62305411 + 62305391 62305431 41 GGCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGG GGCAGCGCAGCAGGGTGAGCCCCACCCAGAGTTCAGCGCGG < 41bp 1 0.0797632820334858 1 0.340061366558075 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305411 chr20:62305418 synonymous SNV . 0 28 hm5C_associated_SNPs_44562 0 0 4 PPIG POSTAR2 ENCODE chr20:62305417-62305443
64251 chr20 62305418 62305418 1 + G A UCEC 62305412 + 62305392 62305432 41 GCAGCGCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGA GCAGCGCAGCAGGGTGAGCCCCACCCAGAGTTCAGCGCGGA < 41bp 1 0.113239580602223 1 0.109229564666748 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305412 chr20:62305418 synonymous SNV . 0 27 hm5C_associated_SNPs_44563 0 0 4 PPIG POSTAR2 ENCODE chr20:62305417-62305443
64251 chr20 62305418 62305418 1 + G A UCEC 62305417 + 62305397 62305437 41 GCAGCAGGGTGAGCCCCACCCGGAGTTCAGCGCGGACTCCC GCAGCAGGGTGAGCCCCACCCAGAGTTCAGCGCGGACTCCC < 41bp 1 0.780076959180443 1 0.839161694049835 experiment 0.439846081639114 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control RTEL1 ENSG00000026036;ENSG00000258366 CDS Human other chr20:62305417 chr20:62305418 synonymous SNV . 0 22 hm5C_associated_SNPs_44564 0 0 4 PPIG POSTAR2 ENCODE chr20:62305417-62305443
64251 chr3 33877666 33877666 1 + G A UCEC 33877665 + 33877645 33877685 41 ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT ATGACTTCATTTATCATGATCAAGTTCCAGACCTTAAAGAT < 41bp 1 0.389699140685717 1 0.219258785247803 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877665 chr3:33877666 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_44565 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33877640-33877700
64251 chr16 20792043 20792043 1 + A G UCEC 20792052 + 20792032 20792072 41 GCAGACATGCCAGTGACAGCCACACCTGTGTGAAGACAAAA GCAGACATGCCGGTGACAGCCACACCTGTGTGAAGACAAAA < 41bp 1 0.346870842451761 1 0.284286081790924 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACSM3;ERI2 ENSG00000005187;ENSG00000196678 CDS Human other chr16:20792052 chr16:20792043 nonsynonymous SNV 0.933 1 12 hm5C_associated_SNPs_44566 0 0 6 DDX24 POSTAR2 ENCODE chr16:20792036-20792070
64251 chr7 73922429 73922429 1 + C T UCEC 73922440 + 73922420 73922460 41 CTGGGTAAGCGCTGTGACGTCCCCACCAACGGCTGCGGACC CTGGGTAAGTGCTGTGACGTCCCCACCAACGGCTGCGGACC < 41bp 1 0.577902504473224 1 0.39321357011795 experiment 0.844194991053552 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73922440 chr7:73922429 nonsynonymous SNV 0.999 2 10 hm5C_associated_SNPs_44569 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:73922410-73922438
64251 chr1 11898614 11898614 1 + C A UCEC 11898626 + 11898606 11898646 41 CATGAACCCTTCGCCTTTCACCGTCTCGCCCAACACCCACG CATGAACCATTCGCCTTTCACCGTCTCGCCCAACACCCACG < 41bp 1 0.117445458862279 1 0.0507520735263824 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11898626 chr1:11898614 nonsynonymous SNV 0.944 4 9 hm5C_associated_SNPs_44570 0 0 1 DDX24 POSTAR2 ENCODE chr1:11898591-11898615
64251 chr19 49376811 49376811 1 + C A UCEC 49376803 + 49376783 49376823 41 TGAAAACCAGCAGTTCCCTTCCTGAAGCCTGGGGACTTTTG TGAAAACCAGCAGTTCCCTTCCTGAAGCATGGGGACTTTTG < 41bp 1 0.180148276462653 1 0.126428514719009 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376803 chr19:49376811 synonymous SNV . 0 29 hm5C_associated_SNPs_44574 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:49376786-49376841
64251 chr5 112868666 112868666 1 + G A UCEC 112868682 + 112868662 112868702 41 CGCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA CGCTATGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGA < 41bp 1 0.515136541814762 1 0.13521534204483 experiment 0.969726916370477 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868682 chr5:112868666 nonsynonymous SNV 0.998 3 5 hm5C_associated_SNPs_44575 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr5 112868666 112868666 1 + G A UCEC 112868683 + 112868663 112868703 41 GCTGTGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT GCTATGGCTGAAAGAGTTGCCGCAGAGAGACGGGAAAGGAT < 41bp 1 0.613875543246443 1 0.748012959957123 experiment 0.772248913507114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YTHDC2 ENSG00000047188 CDS Human protein_coding chr5:112868683 chr5:112868666 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_44576 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:112868658-112868672
64251 chr14 97014145 97014145 1 + G A UCEC 97014156 + 97014136 97014176 41 TATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGATAT TATAGGCAAACAATAAACAGCAAGATGTTTGAGGTGGATAT < 41bp 1 0.501962733840903 1 0.197345346212387 experiment 0.996074532318194 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97014156 chr14:97014145 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_44577 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:97014126-97014147
64251 chr13 111164403 111164403 1 + C T UCEC 111164391 + 111164371 111164411 41 TGCAATGGAGGCCGCGGCACCTGCCACTACTACGCCAACAA TGCAATGGAGGCCGCGGCACCTGCCACTACTATGCCAACAA < 41bp 1 0.213712439025841 1 0.411722809076309 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111164391 chr13:111164403 synonymous SNV . 0 33 hm5C_associated_SNPs_44578 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:111164372-111164404
64251 chr22 26299786 26299786 1 + G T UCEC 26299787 + 26299767 26299807 41 AGCAGGAAAACACCATCAAGCAGCTGGAGCAGGTAGGAAAG AGCAGGAAAACACCATCAATCAGCTGGAGCAGGTAGGAAAG < 41bp 1 0.442857238913105 1 0.901329576969147 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MYO18B ENSG00000133454 CDS Human protein_coding chr22:26299787 chr22:26299786 nonsynonymous SNV 0.997 3 20 hm5C_associated_SNPs_44579 0 0 1 UCHL5 POSTAR2 ENCODE chr22:26299782-26299797
64251 chr11 118452208 118452208 1 + G T UCEC 118452203 + 118452183 118452223 41 ATTTTAGAAGATTTGGAGACCCTAAGGCTCTTCTCAAGAGT ATTTTAGAAGATTTGGAGACCCTAATGCTCTTCTCAAGAGT < 41bp 1 0.18176100642976 1 0.0696074366569519 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118452203 chr11:118452208 nonsynonymous SNV 0.777 4 26 hm5C_associated_SNPs_44581 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118452167-118452208
64251 chr7 100485933 100485933 1 + G A UCEC 100485923 + 100485903 100485943 41 CACAGGAGGCCCTCCATACCCCCATGCCCCGTATGGTGCTG CACAGGAGGCCCTCCATACCCCCATGCCCCATATGGTGCTG < 41bp 1 0.434653768466091 1 0.191416263580322 experiment 1 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485923 chr7:100485933 synonymous SNV . 0 31 hm5C_associated_SNPs_44582 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100485925-100485954
64251 chr17 16329458 16329458 1 + C A UCEC 16329457 + 16329437 16329477 41 GAGTTTTCAGGACTGAGCCACCTTTCCCGAAAGTTCACCGA GAGTTTTCAGGACTGAGCCACATTTCCCGAAAGTTCACCGA < 41bp 1 0.0256686226205712 1 0.0588530600070953 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16329457 chr17:16329458 nonsynonymous SNV 0.571 5 22 hm5C_associated_SNPs_44583 0 0 1 LIN28B POSTAR2 ENCODE chr17:16329410-16329460
64251 chr7 158734637 158734637 1 + A C UCEC 158734618 + 158734598 158734638 41 CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGACGGAAGCAT CTTTCTTCCTGGTCATAGGCCGGCTGTTCGGACGGAAGCCT < 41bp 1 0.46680294925377 1 0.440789401531219 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158734618 chr7:158734637 nonsynonymous SNV 0.041 0 40 hm5C_associated_SNPs_44584 0 0 2 DDX24 POSTAR2 ENCODE chr7:158734617-158734637
64251 chr21 45546835 45546835 1 + T A UCEC 45546824 + 45546804 45546844 41 AAACCTGAGATCAGGGTGACCTCACTCCGCTTCTCTCCCAC AAACCTGAGATCAGGGTGACCTCACTCCGCTACTCTCCCAC < 41bp 1 0.368008040592 1 0.289590179920197 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PWP2 ENSG00000241945 CDS Human protein_coding chr21:45546824 chr21:45546835 nonsynonymous SNV 0.934 4 32 hm5C_associated_SNPs_44585 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45546810-45546844
64251 chr14 23777260 23777260 1 + G A UCEC 23777246 + 23777226 23777266 41 GATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGT GATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCACCTTGT < 41bp 1 0.344017552774045 1 0.186754643917084 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777246 chr14:23777260 nonsynonymous SNV 0.998 2 35 hm5C_associated_SNPs_44586 0 0 1 RBM15 POSTAR2 ENCODE chr14:23777244-23777317
64251 chr14 23777260 23777260 1 + G A UCEC 23777247 + 23777227 23777267 41 ATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTA ATGAACTTTTTCAAGGGGGCCCCAACTGGGGCCACCTTGTA < 41bp 1 0.268435920806574 1 0.128588140010834 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777247 chr14:23777260 nonsynonymous SNV 0.998 2 34 hm5C_associated_SNPs_44587 0 0 1 RBM15 POSTAR2 ENCODE chr14:23777244-23777317
64251 chr14 23777260 23777260 1 + G A UCEC 23777248 + 23777228 23777268 41 TGAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTAG TGAACTTTTTCAAGGGGGCCCCAACTGGGGCCACCTTGTAG < 41bp 1 0.0630062811694278 1 0.19195494055748 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777248 chr14:23777260 nonsynonymous SNV 0.998 2 33 hm5C_associated_SNPs_44588 0 0 1 RBM15 POSTAR2 ENCODE chr14:23777244-23777317
64251 chr14 23777260 23777260 1 + G A UCEC 23777249 + 23777229 23777269 41 GAACTTTTTCAAGGGGGCCCCAACTGGGGCCGCCTTGTAGC GAACTTTTTCAAGGGGGCCCCAACTGGGGCCACCTTGTAGC < 41bp 1 0.416815516644993 1 0.309156596660614 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777249 chr14:23777260 nonsynonymous SNV 0.998 2 32 hm5C_associated_SNPs_44589 0 0 1 RBM15 POSTAR2 ENCODE chr14:23777244-23777317
64251 chr14 23777260 23777260 1 + G A UCEC 23777258 + 23777238 23777278 41 CAAGGGGGCCCCAACTGGGGCCGCCTTGTAGCCTTCTTTGT CAAGGGGGCCCCAACTGGGGCCACCTTGTAGCCTTCTTTGT < 41bp 1 0.0700815100479243 1 0.0539668798446655 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|28418038;GSE74775;RNA-BisSeq;SNB19;Control BCL2L2;BCL2L2-PABPN1 ENSG00000129473;ENSG00000258643 CDS Human other chr14:23777258 chr14:23777260 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_44590 0 0 1 RBM15 POSTAR2 ENCODE chr14:23777244-23777317
64251 chr11 34129833 34129833 1 + C T UCEC 34129843 + 34129823 34129863 41 AGTAGCTGAGCGGCAAAGATCTCTCTTTGTTGTAGTTGGGG AGTAGCTGAGTGGCAAAGATCTCTCTTTGTTGTAGTTGGGG < 41bp 1 0.200495950081751 1 0.0508868992328644 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129843 chr11:34129833 nonsynonymous SNV 0.993 2 11 hm5C_associated_SNPs_44591 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34129799-34129855
64251 chr15 83502175 83502175 1 + C T UCEC 83502180 + 83502160 83502200 41 CCAACCAGCAACAGACGCACCAGTGACCTTGAGAGGAGCAT CCAACCAGCAACAGATGCACCAGTGACCTTGAGAGGAGCAT < 41bp 1 0.262299976373268 1 0.24839922785759 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control WHAMM ENSG00000156232 CDS Human protein_coding chr15:83502180 chr15:83502175 nonsynonymous SNV 0.010 0 16 hm5C_associated_SNPs_44592 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:83502169-83502199
64251 chr5 5457688 5457688 1 + G A UCEC 5457687 + 5457667 5457707 41 AGGTTTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA AGGTTTTAGTACAAAGTCATCATGACGGTGGTAGTACTGAA < 41bp 1 0.34581699007527 1 0.102421581745148 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5457687 chr5:5457688 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_44593 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:5457678-5457717
64251 chr18 74631824 74631824 1 + G A UCEC 74631822 + 74631802 74631842 41 CACTTTCACGGAGGAGGAGACAGCCCAGTTAGCCAAGATCC CACTTTCACGGAGGAGGAGACAACCCAGTTAGCCAAGATCC < 41bp 1 0.226355643807061 1 0.138303369283676 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74631822 chr18:74631824 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_44595 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:74631797-74631824
64251 chr9 131455936 131455936 1 + G T UCEC 131455929 + 131455909 131455949 41 TCATTTAGGATTTGACGAAACGTTCGAGTCAAACGCAGAAT TCATTTAGGATTTGACGAAACGTTCGATTCAAACGCAGAAT < 41bp 1 0.104012404225048 1 0.107626855373383 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455929 chr9:131455936 nonsynonymous SNV 1.000 2 28 hm5C_associated_SNPs_44596 0 0 22 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr9 131455936 131455936 1 + G T UCEC 131455942 + 131455922 131455962 41 GACGAAACGTTCGAGTCAAACGCAGAATAAAGCCAGCAGGA GACGAAACGTTCGATTCAAACGCAGAATAAAGCCAGCAGGA < 41bp 1 0.795702920007338 1 0.52748167514801 experiment 0.408594159985324 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SET ENSG00000119335 CDS Human protein_coding chr9:131455942 chr9:131455936 nonsynonymous SNV 1.000 2 15 hm5C_associated_SNPs_44597 0 0 22 FUS POSTAR2 DRA001158,DRS012384 chr9:131455914-131455960
64251 chr15 86278373 86278373 1 + C A UCEC 86278359 + 86278339 86278379 41 ACCTTTGGAGGATTTGACAGCCATCAGATGAATGCTTCAAA ACCTTTGGAGGATTTGACAGCCATCAGATGAATGATTCAAA < 41bp 1 0.00924573211858853 1 0.413622111082077 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AKAP13 ENSG00000170776 CDS Human protein_coding chr15:86278359 chr15:86278373 nonsynonymous SNV 0.998 2 35 hm5C_associated_SNPs_44598 0 0 1 GRWD1 POSTAR2 ENCODE chr15:86278312-86278385
64251 chr1 235600762 235600762 1 + C A UCEC 235600742 + 235600722 235600762 41 AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGC AAGCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGA < 41bp 1 0.565993657329114 1 0.074709564447403 experiment 0.868012685341772 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TBCE ENSG00000116957 CDS Human protein_coding chr1:235600742 chr1:235600762 synonymous SNV . 0 41 hm5C_associated_SNPs_44600 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235600755-235600789
64251 chr4 166418679 166418679 1 + G T UCEC 166418676 + 166418656 166418696 41 TCTTTTAGGTTGATTTTGAACTGGAGTCATTTTCTGAAAGG TCTTTTAGGTTGATTTTGAACTGTAGTCATTTTCTGAAAGG < 41bp 1 0.550368966323952 1 0.0668288767337799 experiment 0.899262067352096 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CPE ENSG00000109472 CDS Human protein_coding chr4:166418676 chr4:166418679 stopgain 0.999 1 24 hm5C_associated_SNPs_44601 0 0 2 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr4:166418660-166418680
64251 chr1 27105957 27105957 1 + G T UCEC 27105939 + 27105919 27105959 41 TGGCGGATTGGTGGGGGGGACACCACTGAGCATATCCAGAC TGGCGGATTGGTGGGGGGGACACCACTGAGCATATCCATAC < 41bp 1 0.721927102371742 1 0.203414976596832 experiment 0.556145795256516 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control ARID1A ENSG00000117713 CDS Human protein_coding chr1:27105939 chr1:27105957 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_44602 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:27105925-27105961
64251 chr10 103827279 103827279 1 + G T UCEC 103827278 + 103827258 103827298 41 CCGAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCC CCGAGTTTGCCCAGCACCGCCTGCTTGATGCTCACCTCCCC < 41bp 1 0.489202604231125 1 0.160460591316223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827278 chr10:103827279 nonsynonymous SNV 0.336 0 22 hm5C_associated_SNPs_44603 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:103827260-103827280
64251 chr20 61575032 61575032 1 + G A UCEC 61575018 + 61574998 61575038 41 AGGAGTCGCCCTTCGGAGACCTCCTCCACACCATGCAGAGG AGGAGTCGCCCTTCGGAGACCTCCTCCACACCATACAGAGG < 41bp 1 0.426572724203291 1 0.350594997406006 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GID8 ENSG00000101193 CDS Human protein_coding chr20:61575018 chr20:61575032 nonsynonymous SNV 0.995 2 35 hm5C_associated_SNPs_44604 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:61575015-61575035
64251 chr1 150297422 150297422 1 + C A UCEC 150297437 + 150297417 150297457 41 GGGAGCTGGATGAGCTGAAACCATGGATAGAGAAGACAGTG GGGAGATGGATGAGCTGAAACCATGGATAGAGAAGACAGTG < 41bp 1 0.372992837260209 1 0.148348689079285 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150297437 chr1:150297422 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_44606 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:150297398-150297436
64251 chr11 35250855 35250855 1 + A C UCEC 35250851 + 35250831 35250871 41 CTGATGAGACAAGGAACCTGCAGAATGTGGACATGAAGATT CTGATGAGACAAGGAACCTGCAGACTGTGGACATGAAGATT < 41bp 1 0.237915183819352 1 0.202997744083405 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35250851 chr11:35250855 nonsynonymous SNV 0.946 3 25 hm5C_associated_SNPs_44608 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:35250820-35250858
64251 chr2 219269109 219269109 1 + C T UCEC 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGCAACTCAGCCGTGTGGACGATGTGTACTCAGTGCTCAG < 41bp 1 0.39487924379764 1 0.168721973896027 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269109 synonymous SNV . 0 24 hm5C_associated_SNPs_44609 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:219269089-219269112
64251 chr16 70500152 70500152 1 + A C UCEC 70500158 + 70500138 70500178 41 TGCTGGACATCATGACCTATCGGGTGAGGCTGGGTGGTGGC TGCTGGACATCATGCCCTATCGGGTGAGGCTGGGTGGTGGC < 41bp 1 0.782113685679164 1 0.733150064945221 experiment 0.435772628641671 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FUK ENSG00000157353 CDS Human protein_coding chr16:70500158 chr16:70500152 nonsynonymous SNV 0.957 2 15 hm5C_associated_SNPs_44610 0 0 4 DDX24 POSTAR2 ENCODE chr16:70500038-70500174
64251 chr3 184038426 184038426 1 + T C UCEC 184038413 + 184038393 184038433 41 TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGAGATC TCATCTTATAGCTTTCTTTCCCCAGATCCGAATCCGAGATC < 41bp 1 0.148336669076492 1 0.404697358608246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184038413 chr3:184038426 synonymous SNV . 0 34 hm5C_associated_SNPs_44611 0 0 22 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:184038416-184038432
64251 chrX 103434400 103434400 1 + G A UCEC 103434382 + 103434362 103434402 41 GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGGTG GGAAGGAGAGGCTCAGTGGGCTCTTCCTTAACGAAGAGATG < 41bp 1 0.252870825966991 1 0.0963623821735382 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434382 chrX:103434400 nonsynonymous SNV 0.995 4 39 hm5C_associated_SNPs_44612 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:103434380-103434420
64251 chr2 32640615 32640615 1 + C T UCEC 32640607 + 32640587 32640627 41 TTCATTTGTTGGTAGGACTGCGGACATGCCCTGTTGAATCC TTCATTTGTTGGTAGGACTGCGGACATGTCCTGTTGAATCC < 41bp 1 0.114412683002135 1 0.383665710687637 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control BIRC6 ENSG00000115760 CDS Human protein_coding chr2:32640607 chr2:32640615 synonymous SNV . 0 29 hm5C_associated_SNPs_44615 0 0 16 FUS POSTAR2 DRA001158,DRS012384 chr2:32640584-32640617
64251 chr2 27662640 27662640 1 + T A UCEC 27662638 + 27662618 27662658 41 TGTTTCCTTTTCTAGGAGTTCATTCAAAAGTGCCTGCAGTC TGTTTCCTTTTCTAGGAGTTCAATCAAAAGTGCCTGCAGTC < 41bp 1 0.120338524137971 1 0.42230162024498 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27662638 chr2:27662640 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_44617 0 0 4 BUD13 POSTAR2 ENCODE chr2:27662636-27662677
64251 chr6 31516056 31516056 1 + C T UCEC 31516048 + 31516028 31516068 41 CCCAGGCCCTCCTCCAGCGACACCCAGGCCTCGATGTAGAT CCCAGGCCCTCCTCCAGCGACACCCAGGTCTCGATGTAGAT < 41bp 1 0.300262216776274 1 0.0196509063243866 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NFKBIL1 ENSG00000204498;ENSG00000213760 CDS Human other chr6:31516048 chr6:31516056 nonsynonymous SNV 0.997 1 29 hm5C_associated_SNPs_44618 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:31516033-31516060
64251 chr1 145761289 145761289 1 + A G UCEC 145761280 + 145761260 145761300 41 CTTCTCTGGAAGTCTCAAGTCCACCAGATACTACAGAGGAA CTTCTCTGGAAGTCTCAAGTCCACCAGATGCTACAGAGGAA < 41bp 1 0.0662709069711581 1 0.152488440275192 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDZK1 ENSG00000174827 CDS Human protein_coding chr1:145761280 chr1:145761289 nonsynonymous SNV . 0 30 hm5C_associated_SNPs_44621 0 0 1 GRWD1 POSTAR2 ENCODE chr1:145761217-145761318
64251 chr13 114292034 114292034 1 + C A UCEC 114292033 + 114292013 114292053 41 ATATCCGGAAGCTTCTACAGCCGTCTGTCCTGTGGAACTGC ATATCCGGAAGCTTCTACAGCAGTCTGTCCTGTGGAACTGC < 41bp 1 0.193983104604989 1 0.0467501282691956 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292033 chr13:114292034 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_44622 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114291991-114292035
64251 chr22 50960234 50960234 1 + C T UCEC 50960214 + 50960194 50960234 41 GTGTGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGC GTGTGGAGGAGGCTCTGGGACAGAAGCGCAAGAGGAAGGGT < 41bp 1 0.740285978108965 1 0.318568289279938 experiment 0.519428043782069 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50960214 chr22:50960234 synonymous SNV . 0 41 hm5C_associated_SNPs_44623 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:50960223-50960261
64251 chr9 133760748 133760748 1 + G A UCEC 133760729 + 133760709 133760749 41 CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAGC CTCTTCGGAAAACCCGCCAGCCTCCAGAGCGGATCGCCAAC < 41bp 1 0.0136002968192734 1 0.11406597495079 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760729 chr9:133760748 nonsynonymous SNV 0.159 1 40 hm5C_associated_SNPs_44624 0 0 1 SLTM POSTAR2 ENCODE chr9:133760720-133760784
64251 chr19 12924190 12924190 1 + C A UCEC 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT ATACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT < 41bp 1 0.342444562091138 1 0.0822468996047974 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924190 synonymous SNV . 0 1 hm5C_associated_SNPs_44625 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12924156-12924198
64251 chr11 61507977 61507977 1 + C T UCEC 61507980 + 61507960 61508000 41 TACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT TACTTTGCCATCTGGGGTGACAACAAGGCCTTCAATGAGGT < 41bp 1 0.246938903893953 1 0.348295032978058 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507980 chr11:61507977 synonymous SNV . 0 18 hm5C_associated_SNPs_44626 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr1 26136182 26136182 1 + C T UCEC 26136177 + 26136157 26136197 41 GATCCCCTTCCCCACAGGATCCATGCCGAGTTCCAGCTCAG GATCCCCTTCCCCACAGGATCCATGTCGAGTTCCAGCTCAG < 41bp 1 0.134527134850672 1 0.0310828983783722 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136177 chr1:26136182 nonsynonymous SNV 0.871 5 26 hm5C_associated_SNPs_44628 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:26136180-26136200
64251 chr8 21958387 21958387 1 + G T UCEC 21958371 + 21958351 21958391 41 ACAGAGACCTGGAGGAAGACCCCTACTTCACCGACAGCTTC ACAGAGACCTGGAGGAAGACCCCTACTTCACCGACATCTTC < 41bp 1 0.150189807936035 1 0.0463263988494873 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958371 chr8:21958387 nonsynonymous SNV 0.440 0 37 hm5C_associated_SNPs_44629 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:21958358-21958391
64251 chr14 24114503 24114503 1 + G T UCEC 24114501 + 24114481 24114521 41 CGTAGCTGTGGTCCCAGGCCCAGGAGCCTGAGGGGGTGTCT CGTAGCTGTGGTCCCAGGCCCATGAGCCTGAGGGGGTGTCT < 41bp 1 0.797047893798996 1 0.419227510690689 experiment 0.405904212402009 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114501 chr14:24114503 stopgain 0.015 0 23 hm5C_associated_SNPs_44630 0 0 16 DDX55 POSTAR2 ENCODE chr14:24114440-24114517
64251 chr2 30756159 30756159 1 + C A UCEC 30756147 + 30756127 30756167 41 TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTCTCAAAGGT TCAGATTGGAGAAAATTTGCCTCAAAGCGAGTATCAAAGGT < 41bp 1 0.66553699221751 1 0.501719176769257 experiment 0.668926015564981 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30756147 chr2:30756159 nonsynonymous SNV 0.995 4 33 hm5C_associated_SNPs_44639 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:30756139-30756168
64251 chr14 69704349 69704349 1 + C T UCEC 69704365 + 69704345 69704385 41 ACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC ACCATAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGC < 41bp 1 0.526092572036509 1 0.108944118022919 experiment 0.947814855926982 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EXD2 ENSG00000081177 CDS Human protein_coding chr14:69704365 chr14:69704349 synonymous SNV . 0 5 hm5C_associated_SNPs_44640 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:69704334-69704353
64251 chr12 6965313 6965313 1 + G A UCEC 6965312 + 6965292 6965332 41 TGCCTGACATTGTCAGAGATCGGGTATGACTGCCCCCTATG TGCCTGACATTGTCAGAGATCAGGTATGACTGCCCCCTATG < 41bp 1 0.778665782397221 1 0.860447883605957 experiment 0.442668435205559 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6965312 chr12:6965313 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_44655 0 0 7 DDX24 POSTAR2 ENCODE chr12:6965227-6965322
64251 chr11 63743745 63743745 1 + G T UCEC 63743738 + 63743718 63743758 41 TCCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCT TCCTGCTTCGTGACCTTCCTCCTGCCATCGGGCTGGATCCT < 41bp 1 0.162230895694856 1 0.444667547941208 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743738 chr11:63743745 nonsynonymous SNV 0.504 0 28 hm5C_associated_SNPs_44658 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr11 63743745 63743745 1 + G T UCEC 63743739 + 63743719 63743759 41 CCTGCTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTG CCTGCTTCGTGACCTTCCTCCTGCCATCGGGCTGGATCCTG < 41bp 1 0.540909676777694 1 0.145775526762009 experiment 0.918180646444611 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX8A ENSG00000176340 CDS Human protein_coding chr11:63743739 chr11:63743745 nonsynonymous SNV 0.504 0 27 hm5C_associated_SNPs_44659 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr7 55259423 55259423 1 + C A UCEC 55259432 + 55259412 55259452 41 GGCATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGA GGCATGAACTAATTGGAGGACCGTCGCTTGGTGCACCGCGA < 41bp 1 0.0647841559303689 1 0.259965658187866 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EGFR ENSG00000146648 CDS Human protein_coding chr7:55259432 chr7:55259423 stopgain 1.000 1 12 hm5C_associated_SNPs_44660 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr22 51143508 51143508 1 + C T UCEC 51143513 + 51143493 51143533 41 GAAGCCAGAAGAGGACGGGGCTCGGCGCAGAGGTGAGGGGT GAAGCCAGAAGAGGATGGGGCTCGGCGCAGAGGTGAGGGGT < 41bp 1 0.323500907112939 1 0.782187700271606 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SHANK3 ENSG00000251322 CDS Human protein_coding chr22:51143513 chr22:51143508 synonymous SNV . 0 16 hm5C_associated_SNPs_44661 0 0 5 BUD13 POSTAR2 ENCODE chr22:51143448-51143535
64251 chr22 35661141 35661141 1 + T G UCEC 35661146 + 35661126 35661166 41 CGGAAAAAGCACAAGTCATCCTCAGACGCACATTCATCTCC CGGAAAAAGCACAAGGCATCCTCAGACGCACATTCATCTCC < 41bp 1 0.797099457004268 1 0.614558696746826 experiment 0.405801085991465 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661146 chr22:35661141 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_44662 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:35661134-35661182
64251 chr11 61897802 61897802 1 + A G UCEC 61897785 + 61897765 61897805 41 AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGACTC AAGCTCAGGATTGCGCAGGTCTCCCCTGGCCCACGGGGCTC < 41bp 1 0.418809206801506 1 0.202985227108002 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control INCENP ENSG00000149503 CDS Human protein_coding chr11:61897785 chr11:61897802 nonsynonymous SNV 0.014 1 38 hm5C_associated_SNPs_44663 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:61897777-61897802
64251 chr1 32645955 32645955 1 + C A UCEC 32645938 + 32645918 32645958 41 CTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAACCAA CTTCTCCTGACCCAGCATCGCTCATCACAATGAAGAAACAA < 41bp 1 0.288113521466186 1 0.042214035987854 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TXLNA ENSG00000084652 CDS Human protein_coding chr1:32645938 chr1:32645955 nonsynonymous SNV 0.998 1 38 hm5C_associated_SNPs_44664 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32645937-32645967
64251 chr10 126523198 126523198 1 + G A UCEC 126523195 + 126523175 126523215 41 ACACTTGGAGATGCAGAGGCCTCGGATCCTCCTCCCCCTTA ACACTTGGAGATGCAGAGGCCTCAGATCCTCCTCCCCCTTA < 41bp 1 0.631591705541477 1 0.0566122531890869 experiment 0.736816588917047 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126523195 chr10:126523198 synonymous SNV . 0 24 hm5C_associated_SNPs_44665 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:126523179-126523212
64251 chr2 100013255 100013255 1 + T G UCEC 100013261 + 100013241 100013281 41 CTGCAAGATAAAAATCCTCCCTCAGTACATTTTTAATTCTC CTGCAAGATAAAAAGCCTCCCTCAGTACATTTTTAATTCTC < 41bp 1 0.524835405505534 1 0.0757907629013062 experiment 0.950329188988931 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:100013261 chr2:100013255 nonsynonymous SNV 1.000 3 15 hm5C_associated_SNPs_44666 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:100013233-100013265
64251 chr10 103917957 103917957 1 + C T UCEC 103917963 + 103917943 103917983 41 AGCTCAGACTAAAGCCCCTCCCAAACCAGGTACTGTTTCTG AGCTCAGACTAAAGTCCCTCCCAAACCAGGTACTGTTTCTG < 41bp 1 0.17264068942965 1 0.410084009170532 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917963 chr10:103917957 nonsynonymous SNV 0.426 0 15 hm5C_associated_SNPs_44667 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:103917837-103917964
64251 chr1 236711387 236711387 1 + T A UCEC 236711377 + 236711357 236711397 41 GGCGTACACAGCCTGGAGTACAAACACAGATTTAAAGAGCT GGCGTACACAGCCTGGAGTACAAACACAGAATTAAAGAGCT < 41bp 1 0.100389816397014 1 0.256597340106964 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711377 chr1:236711387 nonsynonymous SNV 0.993 2 31 hm5C_associated_SNPs_44668 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:236711380-236711401
64251 chr11 44129389 44129389 1 + T C UCEC 44129385 + 44129365 44129405 41 CTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCA CTGGGCCTCATTGCCACTGGCATGCTTCAGTTTTGGCCCCA < 41bp 1 0.21249161388593 1 0.11436715722084 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129385 chr11:44129389 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_44671 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr11 44129389 44129389 1 + T C UCEC 44129403 + 44129383 44129423 41 GGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA GGCATGCTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAA < 41bp 1 0.0438827367910736 1 0.0298463404178619 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129403 chr11:44129389 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_44672 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr11 44129389 44129389 1 + T C UCEC 44129404 + 44129384 44129424 41 GCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT GCATGCTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAAT < 41bp 1 0.0300412797876977 1 0.0564543306827545 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129404 chr11:44129389 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_44673 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:44129380-44129400
64251 chr5 158695986 158695986 1 + A C UCEC 158695994 + 158695974 158696014 41 CACACTTTCAGAAGATGATACTGTGCTCGATCTCAAACAGT CACACTTTCAGACGATGATACTGTGCTCGATCTCAAACAGT < 41bp 1 0.347221961144508 1 0.0924490094184875 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158695994 chr5:158695986 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_44674 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:158695960-158695987
64251 chr14 23944953 23944953 1 + G A UCEC 23944972 + 23944952 23944992 41 CGTTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAG CATTTTAAGCCTCATCCCAGCAATATGATGAGCAAGGTAAG < 41bp 1 0.308534353611513 1 0.382488876581192 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NGDN ENSG00000129460 CDS Human protein_coding chr14:23944972 chr14:23944953 nonsynonymous SNV 0.995 1 2 hm5C_associated_SNPs_44675 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:23944940-23944960
64251 chrX 21995200 21995200 1 + A G UCEC 21995205 + 21995185 21995225 41 ACCCATAGTGCGAGGAGGAGCCATCGACAGATACTGGCCCA ACCCATAGTGCGAGGGGGAGCCATCGACAGATACTGGCCCA < 41bp 1 0.178765521912742 1 0.488583564758301 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMS ENSG00000102172 CDS Human protein_coding chrX:21995205 chrX:21995200 synonymous SNV . 0 16 hm5C_associated_SNPs_44676 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:21995180-21995200
64251 chr16 22335844 22335844 1 + G T UCEC 22335864 + 22335844 22335884 41 GGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAG TGACTTCCTGGAGCACATGGCCGTGGTGAGGATCAACAAAG < 41bp 1 0.242242749647253 1 0.151188939809799 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22335864 chr16:22335844 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_44677 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr16:22335841-22335861
64251 chr2 220412329 220412329 1 + C T UCEC 220412324 + 220412304 220412344 41 CCGAGAGCGGGTGCTAGAGACACAGCTGAGTGCTGGGGCGA CCGAGAGCGGGTGCTAGAGACACAGTTGAGTGCTGGGGCGA < 41bp 1 0.748778425500627 1 0.319140374660492 experiment 0.502443148998745 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM198 ENSG00000188760 CDS Human protein_coding chr2:220412324 chr2:220412329 synonymous SNV . 0 26 hm5C_associated_SNPs_44678 0 0 4 DDX3X POSTAR2 ENCODE chr2:220412296-220412352
64251 chr2 241514991 241514991 1 + C T UCEC 241514997 + 241514977 241515017 41 TCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAGCGTGGAC TCCTGAGCTTCTTCTCGGAGCTGAAGGAGCAGAGCGTGGAC < 41bp 1 0.588679712069207 1 0.40302562713623 experiment 0.822640575861587 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514997 chr2:241514991 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_44679 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr10 1118121 1118121 1 + C T UCEC 1118127 + 1118107 1118147 41 AAGCGCAAGTTGTTCGACTGCTCGCCAAACAAAACAGAAGC AAGCGCAAGTTGTTTGACTGCTCGCCAAACAAAACAGAAGC < 41bp 1 0.274868307078348 1 0.654619634151459 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WDR37 ENSG00000047056 CDS Human protein_coding chr10:1118127 chr10:1118121 nonsynonymous SNV 0.938 1 15 hm5C_associated_SNPs_44681 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:1118112-1118128
64251 chr19 16296498 16296498 1 + G T UCEC 16296488 + 16296468 16296508 41 ACTCCTGGAAGCAATGGGAACGAGCAAAAAGAACGAGGAGG ACTCCTGGAAGCAATGGGAACGAGCAAAAATAACGAGGAGG < 41bp 1 0.513527746415648 1 0.593364238739014 experiment 0.972944507168704 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control FAM32A ENSG00000105058 CDS Human protein_coding chr19:16296488 chr19:16296498 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_44683 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:16296498-16296499
64251 chr16 78143698 78143698 1 + G T UCEC 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTTGCCATACGGATGGGAACAATAAACTGATGAGAACGGA < 41bp 1 0.183271267753626 1 0.359098464250565 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143698 stopgain 0.999 1 24 hm5C_associated_SNPs_44686 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143676-78143702
64251 chr22 18979472 18979472 1 + T C UCEC 18979466 + 18979446 18979486 41 AGATGGAGAAGCGAACCAAGCCTGTCTGTGTGTTCTGGAAC AGATGGAGAAGCGAACCAAGCCTGTCCGTGTGTTCTGGAAC < 41bp 1 0.0957703461743179 1 0.0562752187252045 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGCR5 ENSG00000237517 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:18979466 chr22:18979472 . . 0 27 hm5C_associated_SNPs_44687 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:18979469-18979504
64251 chr11 125475547 125475547 1 + C T UCEC 125475549 + 125475529 125475569 41 GCCATCTTTTGCATGCTACTCACCTACTACATGTGGATCAA GCCATCTTTTGCATGCTATTCACCTACTACATGTGGATCAA < 41bp 1 0.605317730827758 1 0.44750115275383 experiment 0.789364538344484 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control STT3A ENSG00000134910 CDS Human protein_coding chr11:125475549 chr11:125475547 nonsynonymous SNV 0.994 1 19 hm5C_associated_SNPs_44688 0 0 18 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:125475520-125475560
64251 chr12 95681476 95681476 1 + T G UCEC 95681481 + 95681461 95681501 41 ACTTGAAAAGCTTGTTTGTACTAAAGAAACACAAGAACTAG ACTTGAAAAGCTTGTGTGTACTAAAGAAACACAAGAACTAG < 41bp 1 0.746108977763906 1 0.187720865011215 experiment 0.507782044472188 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control VEZT ENSG00000028203 CDS Human protein_coding chr12:95681481 chr12:95681476 synonymous SNV . 0 16 hm5C_associated_SNPs_44689 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:95681446-95681486
64251 chr1 153713790 153713790 1 + A C UCEC 153713778 + 153713758 153713798 41 CAGGTGTGCAAAGGCCTCCCCCAGCATGAAGAAATCTGCCT CAGGTGTGCAAAGGCCTCCCCCAGCATGAAGACATCTGCCT < 41bp 1 0.164893378699213 1 0.201267093420029 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control INTS3 ENSG00000143624 CDS Human protein_coding chr1:153713778 chr1:153713790 nonsynonymous SNV 0.996 2 33 hm5C_associated_SNPs_44690 0 0 7 FUS POSTAR2 GSE40653,GSM998875 chr1:153713780-153713800
64251 chr9 135932281 135932281 1 + G T UCEC 135932293 + 135932273 135932313 41 GACCATCCGCTCCAAGAGGCCTGGTAAGAGCCGCTTGGGGT GACCATCCTCTCCAAGAGGCCTGGTAAGAGCCGCTTGGGGT < 41bp 1 0.514528972583537 1 0.103738516569138 experiment 0.970942054832926 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135932293 chr9:135932281 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_44691 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:135932261-135932286
64251 chr17 45757974 45757974 1 + A C UCEC 45757956 + 45757936 45757976 41 ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACAAA ATGAATTGTTAACTGAAGGGCGGAGATCGAAGACTAACCAA < 41bp 1 0.459861026124228 1 0.301657974720001 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757956 chr17:45757974 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_44693 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr4 187122437 187122437 1 + G A UCEC 187122449 + 187122429 187122469 41 CTGATGACGAAGGGAACAGGCTAAGTCATGAAGATATTCGA CTGATGACAAAGGGAACAGGCTAAGTCATGAAGATATTCGA < 41bp 1 0.372117524299551 1 0.0866914987564087 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP4V2 ENSG00000145476 CDS Human protein_coding chr4:187122449 chr4:187122437 nonsynonymous SNV 0.922 0 9 hm5C_associated_SNPs_44695 0 0 1 PRPF8 POSTAR2 ENCODE chr4:187122429-187122520
64251 chr7 69599531 69599531 1 + C T UCEC 69599551 + 69599531 69599571 41 CCTTCCAGCTTGGGAACAGGCTACTTCGTAAGTCTATCTCA TCTTCCAGCTTGGGAACAGGCTACTTCGTAAGTCTATCTCA < 41bp 1 0.206848973055069 1 0.0647813379764557 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AUTS2 ENSG00000158321 CDS Human protein_coding chr7:69599551 chr7:69599531 nonsynonymous SNV 1.000 0 1 hm5C_associated_SNPs_44697 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:69599520-69599540
64251 chr6 133137686 133137686 1 + A G UCEC 133137682 + 133137662 133137702 41 TGGAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAG TGGAGGCCCTTTGTGCTGAACACCGAATCAACCTAATTAAG < 41bp 1 0.660117349623238 1 0.0437493622303009 experiment 0.679765300753524 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133137682 chr6:133137686 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_44698 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137671-133137874
64251 chr6 133137686 133137686 1 + A G UCEC 133137684 + 133137664 133137704 41 GAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGT GAGGCCCTTTGTGCTGAACACCGAATCAACCTAATTAAGGT < 41bp 1 0.598710770537013 1 0.491567313671112 experiment 0.802578458925973 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133137684 chr6:133137686 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_44699 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137671-133137874
64251 chr6 133137686 133137686 1 + A G UCEC 133137694 + 133137674 133137714 41 GTGCTGAACACCAAATCAACCTAATTAAGGTAAGGCTGCTA GTGCTGAACACCGAATCAACCTAATTAAGGTAAGGCTGCTA < 41bp 1 0.491230029640488 1 0.186433523893356 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPS12 ENSG00000112306 CDS Human protein_coding chr6:133137694 chr6:133137686 nonsynonymous SNV 0.997 1 13 hm5C_associated_SNPs_44700 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133137671-133137874
64251 chr10 73122283 73122283 1 + C T UCEC 73122270 + 73122250 73122290 41 CTAAGATTGTGCCCAGGGAGCTGGCTGAGGCCACGGGAGTG CTAAGATTGTGCCCAGGGAGCTGGCTGAGGCCATGGGAGTG < 41bp 1 0.663645223854715 1 0.448062479496002 experiment 0.672709552290571 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73122270 chr10:73122283 nonsynonymous SNV 0.670 4 34 hm5C_associated_SNPs_44701 0 0 4 TIA1 POSTAR2 ENCODE chr10:73122259-73122304
64251 chr17 25633863 25633863 1 + C A UCEC 25633851 + 25633831 25633871 41 GGGCATCAGAATTGGGTGTACAGCTGTGCATTCTCTCCTGA GGGCATCAGAATTGGGTGTACAGCTGTGCATTATCTCCTGA < 41bp 1 0.719177466030001 1 0.199654132127762 experiment 0.561645067939998 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WSB1 ENSG00000109046 CDS Human protein_coding chr17:25633851 chr17:25633863 nonsynonymous SNV 0.998 3 33 hm5C_associated_SNPs_44702 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:25633838-25633876
64251 chr13 25905590 25905590 1 + G A UCEC 25905593 + 25905573 25905613 41 GAAGCCAAGAAGTGGCAGAACACACCCAGAGTTACTACTGG GAAGCCAAGAAGTGGCAAAACACACCCAGAGTTACTACTGG < 41bp 1 0.340247674968199 1 0.0614571571350098 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP58 ENSG00000139496 CDS Human protein_coding chr13:25905593 chr13:25905590 synonymous SNV . 0 18 hm5C_associated_SNPs_44703 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:25905562-25905605
64251 chr17 73058266 73058266 1 + T G UCEC 73058257 + 73058237 73058277 41 ATAACTACGGCAATGAGGATCAGGCAGAATTCCTCTGTGTT ATAACTACGGCAATGAGGATCAGGCAGAAGTCCTCTGTGTT < 41bp 1 0.244023171093867 1 0.782800197601318 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73058257 chr17:73058266 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_44705 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:73058246-73058273
64251 chr11 120280116 120280116 1 + G T UCEC 120280127 + 120280107 120280147 41 CTCCTCCAAGAAGACAAAGTCTAGTTCAGAGGAGAGTAGAT CTCCTCCAATAAGACAAAGTCTAGTTCAGAGGAGAGTAGAT < 41bp 1 0.171280267555006 1 0.32916048169136 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120280127 chr11:120280116 nonsynonymous SNV 1.000 1 10 hm5C_associated_SNPs_44706 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:120280096-120280116
64251 chr17 57754428 57754428 1 + G T UCEC 57754417 + 57754397 57754437 41 ATCTACATAGACAGTAATAACAACCCGGAGAGATTTCTTCG ATCTACATAGACAGTAATAACAACCCGGAGATATTTCTTCG < 41bp 1 0.267665874020487 1 0.144222587347031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57754417 chr17:57754428 nonsynonymous SNV 1.000 2 32 hm5C_associated_SNPs_44707 0 0 23 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr22 46681152 46681152 1 + C T UCEC 46681140 + 46681120 46681160 41 AGAACTTTATTCTTCCAGGGCGAATATGAGGCCGCGCTGAC AGAACTTTATTCTTCCAGGGCGAATATGAGGCTGCGCTGAC < 41bp 1 0.11092632055655 1 0.241885125637054 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTC38 ENSG00000075234 CDS Human protein_coding chr22:46681140 chr22:46681152 synonymous SNV . 0 33 hm5C_associated_SNPs_44708 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46681135-46681164
64251 chrX 123191727 123191727 1 + G A UCEC 123191735 + 123191715 123191755 41 GGCTCTTCAGTCGTAGAGATCCAGAGGAGGATGGAATGATG GGCTCTTCAGTCATAGAGATCCAGAGGAGGATGGAATGATG < 41bp 1 0.431027081316635 1 0.552512347698212 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123191735 chrX:123191727 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_44709 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:123191720-123191740
64251 chr6 7583131 7583131 1 + G T UCEC 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAGGAGGAGGCTATTATGAAGATAGAATCGG < 41bp 1 0.0786923995487109 1 0.0879997313022614 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583131 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_44710 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr15 90814700 90814700 1 + A T UCEC 90814684 + 90814664 90814704 41 CTTATGCCAGGGCATGAAGCCTCATCTAAAGACCCAAATCA CTTATGCCAGGGCATGAAGCCTCATCTAAAGACCCATATCA < 41bp 1 0.370771349582424 1 0.4193195104599 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NGRN ENSG00000182768 CDS Human protein_coding chr15:90814684 chr15:90814700 nonsynonymous SNV 0.001 1 37 hm5C_associated_SNPs_44711 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90814668-90814821
64251 chr3 9515081 9515081 1 + A G UCEC 9515077 + 9515057 9515097 41 TGCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTT TGCCCATGGTGTGCAGGGATCCTCGGCCCGAACTCCATCTT < 41bp 1 0.217443380355036 1 0.0404566824436188 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515077 chr3:9515081 synonymous SNV . 0 25 hm5C_associated_SNPs_44713 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:9515067-9515143
64251 chr7 150765124 150765124 1 + G A UCEC 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCA < 41bp 1 0.58099983986784 1 0.36908808350563 experiment 0.83800032026432 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765124 nonsynonymous SNV 0.999 3 41 hm5C_associated_SNPs_44714 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr7 150765124 150765124 1 + G A UCEC 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCAC < 41bp 1 0.546639493457049 1 0.782880663871765 experiment 0.906721013085902 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765124 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_44715 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150765107-150765128
64251 chr6 155139671 155139671 1 + G A UCEC 155139674 + 155139654 155139694 41 TCGACAAGATGCATTTCGAGCTCTTCAGAAACTCAGTTCTG TCGACAAGATGCATTTCAAGCTCTTCAGAAACTCAGTTCTG < 41bp 1 0.201607012784229 1 0.200932830572128 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155139674 chr6:155139671 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_44716 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:155139615-155139696
64251 chr7 6634125 6634125 1 + T C UCEC 6634139 + 6634119 6634159 41 CTGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA CTGCTGCTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA < 41bp 1 0.0466458267133633 1 0.321909964084625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634139 chr7:6634125 synonymous SNV . 0 7 hm5C_associated_SNPs_44717 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:6634104-6634125
64251 chr10 102762412 102762412 1 + C T UCEC 102762420 + 102762400 102762440 41 CCGGCCCTGTCCCGGGGGGCCAGCTCCTCCCCGCCACCACG CCGGCCCTGTCCTGGGGGGCCAGCTCCTCCCCGCCACCACG < 41bp 1 0.32827390183286 1 0.466960072517395 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102762420 chr10:102762412 synonymous SNV . 0 13 hm5C_associated_SNPs_44719 0 0 5 DDX24 POSTAR2 ENCODE chr10:102762228-102762472
64251 chr17 43323043 43323043 1 + G T UCEC 43323037 + 43323017 43323057 41 GTGGAGTACTTCGGAGAGAACCCCAAGACCACATCCCCAGG GTGGAGTACTTCGGAGAGAACCCCAATACCACATCCCCAGG < 41bp 1 0.535902618493539 1 0.458982288837433 experiment 0.928194763012922 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FMNL1 ENSG00000184922 CDS Human protein_coding chr17:43323037 chr17:43323043 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_44721 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:43323043-43323077
64251 chr1 26136285 26136285 1 + C T UCEC 26136269 + 26136249 26136289 41 CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCC CATCATCCTCTCCAAAGACGCCACCCACGTCCGCGATTTCC < 41bp 1 0.0359107683861424 1 0.0551288723945618 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136269 chr1:26136285 synonymous SNV . 0 37 hm5C_associated_SNPs_44722 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136285 26136285 1 + C T UCEC 26136270 + 26136250 26136290 41 ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCG ATCATCCTCTCCAAAGACGCCACCCACGTCCGCGATTTCCG < 41bp 1 0.102844843918595 1 0.0325266122817993 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136270 chr1:26136285 synonymous SNV . 0 36 hm5C_associated_SNPs_44723 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136285 26136285 1 + C T UCEC 26136273 + 26136253 26136293 41 ATCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCT ATCCTCTCCAAAGACGCCACCCACGTCCGCGATTTCCGGCT < 41bp 1 0.119226329940207 1 0.112191200256348 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136273 chr1:26136285 synonymous SNV . 0 33 hm5C_associated_SNPs_44724 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr1 26136285 26136285 1 + C T UCEC 26136274 + 26136254 26136294 41 TCCTCTCCAAAGACGCCACCCACGTCCGCGACTTCCGGCTC TCCTCTCCAAAGACGCCACCCACGTCCGCGATTTCCGGCTC < 41bp 1 0.553561778128959 1 0.0605772733688354 experiment 0.892876443742082 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SELENON ENSG00000162430 CDS Human protein_coding chr1:26136274 chr1:26136285 synonymous SNV . 0 32 hm5C_associated_SNPs_44725 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26136263-26136309
64251 chr3 25542761 25542761 1 + G A UCEC 25542771 + 25542751 25542791 41 ACCAGGAATCGATGCCAATACTGTCGACTCCAGAAGTGCTT ACCAGGAATCAATGCCAATACTGTCGACTCCAGAAGTGCTT < 41bp 1 0.238935560182215 1 0.0825390517711639 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RARB ENSG00000077092 CDS Human protein_coding chr3:25542771 chr3:25542761 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_44726 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:25542739-25542766
64251 chr17 4905839 4905839 1 + G A UCEC 4905833 + 4905813 4905853 41 AGTCGGGGTTCTCTGCGGGTCCGGGAGCACCCCATCCTGGG AGTCGGGGTTCTCTGCGGGTCCGGGAACACCCCATCCTGGG < 41bp 1 0.515717851465978 1 0.619586706161499 experiment 0.968564297068043 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905833 chr17:4905839 synonymous SNV . 0 27 hm5C_associated_SNPs_44727 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr17:4905812-4905839
64251 chr15 66816079 66816079 1 + T G UCEC 66816065 + 66816045 66816085 41 GGTCCTTTGAATCATCTCTACAGAGAACTGAAATTTCTTCT GGTCCTTTGAATCATCTCTACAGAGAACTGAAATGTCTTCT < 41bp 1 0.437343551073004 1 0.331680953502655 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66816065 chr15:66816079 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_44728 0 0 2 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr15:66816079-66816080
64251 chr16 29828312 29828312 1 + G T UCEC 29828300 + 29828280 29828320 41 AGGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAA AGGAGAGATCCGATGAGGAGCCGGAGGCCAAATAAGAGGAA < 41bp 1 0.694195321878436 1 0.595689594745636 experiment 0.611609356243127 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828300 chr16:29828312 stopgain 1.000 1 33 hm5C_associated_SNPs_44729 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr16 29828312 29828312 1 + G T UCEC 29828301 + 29828281 29828321 41 GGAGAGATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAG GGAGAGATCCGATGAGGAGCCGGAGGCCAAATAAGAGGAAG < 41bp 1 0.748337899450412 1 0.813071310520172 experiment 0.503324201099176 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828301 chr16:29828312 stopgain 1.000 1 32 hm5C_associated_SNPs_44730 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr16 29828312 29828312 1 + G T UCEC 29828307 + 29828287 29828327 41 ATCCGATGAGGAGCCGGAGGCCAAAGAAGAGGAAGAGGAAA ATCCGATGAGGAGCCGGAGGCCAAATAAGAGGAAGAGGAAA < 41bp 1 0.364146315105004 1 0.494572937488556 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828307 chr16:29828312 stopgain 1.000 1 26 hm5C_associated_SNPs_44731 0 0 1 SRSF1 POSTAR2 ENCODE chr16:29828274-29828326
64251 chr9 131730845 131730845 1 + G T UCEC 131730830 + 131730810 131730850 41 TTGTTCAGTGCCTTCGGGAACAGTCCATGCTGCTAGAAATT TTGTTCAGTGCCTTCGGGAACAGTCCATGCTGCTATAAATT < 41bp 1 0.0419932768553591 1 0.316308557987213 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NUP188 ENSG00000095319 CDS Human protein_coding chr9:131730830 chr9:131730845 stopgain 0.999 1 36 hm5C_associated_SNPs_44732 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131730812-131730845
64251 chr22 32889266 32889266 1 + G A UCEC 32889253 + 32889233 32889273 41 TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCGAGGTGAT TCCTGTGGAGGTTTTTATATCTGCGTGATTTTCAAGGTGAT < 41bp 1 0.55349929228054 1 0.462613224983215 experiment 0.893001415438921 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889253 chr22:32889266 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_44733 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:32889247-32889286
64251 chr19 11215934 11215934 1 + G A UCEC 11215952 + 11215932 11215972 41 ACGATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCA ACAATGGGAAGTGCATCTCTCGGCAGTTCGTCTGTGACTCA < 41bp 1 0.788533354711832 1 0.882750034332275 experiment 0.422933290576335 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LDLR ENSG00000130164 CDS Human protein_coding chr19:11215952 chr19:11215934 nonsynonymous SNV 0.555 1 3 hm5C_associated_SNPs_44734 1 0 9 BUD13 POSTAR2 ENCODE chr19:11215846-11215955
64251 chr10 81036951 81036951 1 + C T UCEC 81036966 + 81036946 81036986 41 TCCTCCTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCG TCCTCTTGGTGCGAAGAGCTCGGCCGCCTGCTGCTGCTCCG < 41bp 1 0.559465134123172 1 0.274315237998962 experiment 0.881069731753656 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZMIZ1 ENSG00000108175 CDS Human protein_coding chr10:81036966 chr10:81036951 synonymous SNV . 0 6 hm5C_associated_SNPs_44735 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:81036940-81036960
64251 chr19 7589945 7589945 1 + C T UCEC 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CACCCCCAGAAGAGGAAGACCTTCGCCGTTGTCTCAAATAC < 41bp 1 0.298498166342053 1 0.156070232391357 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589945 nonsynonymous SNV 0.982 3 30 hm5C_associated_SNPs_44736 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7589933-7589965
64251 chr2 233681608 233681608 1 + A C UCEC 233681615 + 233681595 233681635 41 AAGAGAGGCAGAAATGAGGGCAAAACGGGAAGAGGAAGAGC AAGAGAGGCAGAACTGAGGGCAAAACGGGAAGAGGAAGAGC < 41bp 1 0.291287834733328 1 0.416121542453766 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681615 chr2:233681608 nonsynonymous SNV 1.000 0 14 hm5C_associated_SNPs_44737 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:233681600-233681620
64251 chr1 212619345 212619345 1 + C T UCEC 212619354 + 212619334 212619374 41 AAGGATGAGTTCTGATGTTCCCCCTGCAGGAGCAGGTTCTT AAGGATGAGTTTTGATGTTCCCCCTGCAGGAGCAGGTTCTT < 41bp 1 0.297538882434673 1 0.0463404357433319 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NENF ENSG00000117691 CDS Human protein_coding chr1:212619354 chr1:212619345 synonymous SNV . 0 12 hm5C_associated_SNPs_44739 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212619229-212619482
64251 chrX 67741237 67741237 1 + A G UCEC 67741231 + 67741211 67741251 41 CAGAATGCTGCAAAGAGACTCTGCAGATAGTGAAAAAGATG CAGAATGCTGCAAAGAGACTCTGCAGGTAGTGAAAAAGATG < 41bp 1 0.704795905245541 1 0.389639616012573 experiment 0.590408189508918 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control YIPF6 ENSG00000181704 CDS Human protein_coding chrX:67741231 chrX:67741237 nonsynonymous SNV 0.047 1 27 hm5C_associated_SNPs_44740 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:67741213-67741240
64251 chr20 35835736 35835736 1 + G A UCEC 35835730 + 35835710 35835750 41 GCAAGAAGAACTTTGAGTCCCTCTCCGAAGCCTTCAGCGTG GCAAGAAGAACTTTGAGTCCCTCTCCAAAGCCTTCAGCGTG < 41bp 1 0.2241114743593 1 0.110110342502594 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35835730 chr20:35835736 nonsynonymous SNV 0.997 2 27 hm5C_associated_SNPs_44741 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:35835691-35835742
64251 chr5 162905753 162905753 1 + A G UCEC 162905772 + 162905752 162905792 41 AAAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACT AGAAGTATGACAGTATGGTGCAAAGCCTTGAAGATGTTACT < 41bp 1 0.346600131650233 1 0.168909549713135 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control HMMR ENSG00000072571 CDS Human protein_coding chr5:162905772 chr5:162905753 synonymous SNV . 0 2 hm5C_associated_SNPs_44742 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:162905736-162905757
64251 chr5 167933122 167933122 1 + A G UCEC 167933117 + 167933097 167933137 41 AAATCAGATGGAGGTTATACCTATGATACATCTGACCTGGC AAATCAGATGGAGGTTATACCTATGGTACATCTGACCTGGC < 41bp 1 0.52421466118186 1 0.323232203722 experiment 0.95157067763628 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167933117 chr5:167933122 nonsynonymous SNV 0.999 3 26 hm5C_associated_SNPs_44743 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:167933096-167933142
64251 chr12 70704744 70704744 1 + G A UCEC 70704725 + 70704705 70704745 41 AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACGA AAGAAGTTTGTAGAGGGGGTCGACAGTGACTACCATGACAA < 41bp 1 0.748629605991765 1 0.480823457241058 experiment 0.50274078801647 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CNOT2 ENSG00000111596 CDS Human protein_coding chr12:70704725 chr12:70704744 nonsynonymous SNV 0.996 1 40 hm5C_associated_SNPs_44744 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:70704740-70704760
64251 chr1 57157092 57157092 1 + G T UCEC 57157082 + 57157062 57157102 41 AAAAGATACCAGGTGATCAGCACTCCAACAGATTTTTTTAT AAAAGATACCAGGTGATCAGCACTCCAACATATTTTTTTAT < 41bp 1 0.0420566188565077 1 0.0945472419261932 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57157082 chr1:57157092 nonsynonymous SNV 0.999 4 31 hm5C_associated_SNPs_44746 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:57157066-57157093
64251 chr12 69128526 69128526 1 + G T UCEC 69128531 + 69128511 69128551 41 GTGGTTTAAGCATATGAATTCAGTTCCACAAAAACCTGCTT GTGGTTTAAGCATATTAATTCAGTTCCACAAAAACCTGCTT < 41bp 1 0.182317101019039 1 0.496727705001831 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69128531 chr12:69128526 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_44747 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:69128497-69128526
64251 chr12 53776175 53776175 1 + T C UCEC 53776180 + 53776160 53776200 41 TGGTGGGCAGTATGTTGTGGCTGCCGCTCCCAACTTACAGA TGGTGGGCAGTATGTCGTGGCTGCCGCTCCCAACTTACAGA < 41bp 1 0.226882979464354 1 0.0362419784069061 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SP1 ENSG00000185591 CDS Human protein_coding chr12:53776180 chr12:53776175 synonymous SNV . 0 16 hm5C_associated_SNPs_44748 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53776141-53776179
64251 chr2 118579617 118579617 1 + C T UCEC 118579611 + 118579591 118579631 41 TCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCAT TCAACATCATTGTGGCCACACCAGGCTGTCTGCTGGACCAT < 41bp 1 0.591283539177205 1 0.10666686296463 experiment 0.817432921645591 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579611 chr2:118579617 nonsynonymous SNV 0.990 4 27 hm5C_associated_SNPs_44749 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579554-118579619
64251 chr16 675480 675480 1 + A G UCEC 675485 + 675465 675505 41 TGGTCCTTTGACGGCATCGACCGCTGGATCAAGGAGATCGA TGGTCCTTTGACGGCGTCGACCGCTGGATCAAGGAGATCGA < 41bp 1 0.207163660734217 1 0.277953714132309 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C ENSG00000197562 CDS Human protein_coding chr16:675485 chr16:675480 nonsynonymous SNV 0.993 1 16 hm5C_associated_SNPs_44750 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:675472-675491
64251 chrX 114856667 114856667 1 + G A UCEC 114856664 + 114856644 114856684 41 AGAGAAATTATTCAGAAACTCATGCTGGATGGTGACAGGAA AGAGAAATTATTCAGAAACTCATACTGGATGGTGACAGGAA < 41bp 1 0.129450974330362 1 0.118164718151093 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856664 chrX:114856667 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_44752 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:114856560-114856680
64251 chrX 114856667 114856667 1 + G A UCEC 114856679 + 114856659 114856699 41 AAACTCATGCTGGATGGTGACAGGAATAAAGATGGGAAAAT AAACTCATACTGGATGGTGACAGGAATAAAGATGGGAAAAT < 41bp 1 0.795623751233163 1 0.367406666278839 experiment 0.408752497533675 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856679 chrX:114856667 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_44753 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:114856560-114856680
64251 chrX 47072509 47072509 1 + A G UCEC 47072491 + 47072471 47072511 41 ACAAGGTTGTGCAGGGGCACCGACAGCTTGACTCCTACAAG ACAAGGTTGTGCAGGGGCACCGACAGCTTGACTCCTACGAG < 41bp 1 0.712972310391589 1 0.426764607429504 experiment 0.574055379216821 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47072491 chrX:47072509 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_44755 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:47072473-47072511
64251 chr1 182827337 182827337 1 + G T UCEC 182827338 + 182827318 182827358 41 CCATCTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGA CCATCTTGGAGTGGTTGAATCTTACTCCGGACTTACAAAGA < 41bp 1 0.273926662093661 1 0.273489624261856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827338 chr1:182827337 nonsynonymous SNV 0.999 0 20 hm5C_associated_SNPs_44756 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 182827337 182827337 1 + G T UCEC 182827342 + 182827322 182827362 41 CTTGGAGTGGTTGAAGCTTACTCCGGACTTACAAAGAAGAA CTTGGAGTGGTTGAATCTTACTCCGGACTTACAAAGAAGAA < 41bp 1 0.734579327697949 1 0.359808683395386 experiment 0.530841344604102 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827342 chr1:182827337 nonsynonymous SNV 0.999 0 16 hm5C_associated_SNPs_44757 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr1 182827337 182827337 1 + G T UCEC 182827349 + 182827329 182827369 41 TGGTTGAAGCTTACTCCGGACTTACAAAGAAGAAGGAAGGA TGGTTGAATCTTACTCCGGACTTACAAAGAAGAAGGAAGGA < 41bp 1 0.0522472902949628 1 0.0626658797264099 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827349 chr1:182827337 nonsynonymous SNV 0.999 0 9 hm5C_associated_SNPs_44758 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182827296-182827350
64251 chr17 47119679 47119679 1 + C T UCEC 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CATCGAGAATTGTTGCAGGGCTGAGCAGGAAATAATGAAGA < 41bp 1 0.313630551759634 1 0.199812978506088 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119679 synonymous SNV . 0 22 hm5C_associated_SNPs_44759 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr20 60882779 60882779 1 + G T UCEC 60882762 + 60882742 60882782 41 AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAG AGCAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATTGAG < 41bp 1 0.271635478217094 1 0.487201929092407 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882762 chr20:60882779 stopgain 0.784 0 38 hm5C_associated_SNPs_44760 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:60882761-60882794
64251 chr20 60882779 60882779 1 + G T UCEC 60882764 + 60882744 60882784 41 CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATGGAGCC CAACTAGCCCGAGCCCCGCGCCCAGTTCCGGGAATTGAGCC < 41bp 1 0.222550277484736 1 0.531945407390594 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADRM1 ENSG00000130706 CDS Human protein_coding chr20:60882764 chr20:60882779 stopgain 0.784 0 36 hm5C_associated_SNPs_44761 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:60882761-60882794
64251 chr16 5127982 5127982 1 + T C UCEC 5128001 + 5127981 5128021 41 ATGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA ACGAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTA < 41bp 1 0.363790116679149 1 0.0819019973278046 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128001 chr16:5127982 nonsynonymous SNV 0.967 1 2 hm5C_associated_SNPs_44762 0 0 3 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr6 26597212 26597212 1 + T C UCEC 26597193 + 26597173 26597213 41 GGCACTTTACGGCCGTCGTGCCGCTCGTGTCAGTCAACATG GGCACTTTACGGCCGTCGTGCCGCTCGTGTCAGTCAACACG < 41bp 1 0.222542461136726 1 0.0633856356143951 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597193 chr6:26597212 nonsynonymous SNV 0.035 1 40 hm5C_associated_SNPs_44764 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26597180-26597220
64251 chr6 26597212 26597212 1 + T C UCEC 26597203 + 26597183 26597223 41 GGCCGTCGTGCCGCTCGTGTCAGTCAACATGGAGGCAGAGG GGCCGTCGTGCCGCTCGTGTCAGTCAACACGGAGGCAGAGG < 41bp 1 0.410160953334118 1 0.413780629634857 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597203 chr6:26597212 nonsynonymous SNV 0.035 1 30 hm5C_associated_SNPs_44765 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26597180-26597220
64251 chr16 23700963 23700963 1 + T C UCEC 23700976 + 23700956 23700996 41 CTGCACCTCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA CTGCACCCCAGCAACGGCAGCGTGCAGATCAACTTCTTCCA < 41bp 1 0.179064977470362 1 0.271413087844849 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700976 chr16:23700963 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_44766 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23700913-23700979
64251 chr9 130551717 130551717 1 + C T UCEC 130551725 + 130551705 130551745 41 CATGTTCGAGTACTTGGCACCACCGCGCCGGAAGGGCAGCC CATGTTCGAGTATTTGGCACCACCGCGCCGGAAGGGCAGCC < 41bp 1 0.5190471281736 1 0.297393143177032 experiment 0.961905743652799 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDK9 ENSG00000136807 CDS Human protein_coding chr9:130551725 chr9:130551717 synonymous SNV . 0 13 hm5C_associated_SNPs_44767 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr9:130551700-130551720
64251 chr10 24817012 24817012 1 + A C UCEC 24816992 + 24816972 24817012 41 ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAA ACCAAATCTGGAGATGCCGCCAGCCACAGGCCCACTGCCAC < 41bp 1 0.24239318377706 1 0.683932304382324 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24816992 chr10:24817012 synonymous SNV . 0 41 hm5C_associated_SNPs_44768 0 0 2 GRWD1 POSTAR2 ENCODE chr10:24816963-24817022
64251 chr19 44341227 44341227 1 + T C UCEC 44341234 + 44341214 44341254 41 ACATTCAGGGATGTGGCCATCGACTTCTCTCAGGAGGAGTG ACATTCAGGGATGCGGCCATCGACTTCTCTCAGGAGGAGTG < 41bp 1 0.543665926738198 1 0.123779892921448 experiment 0.912668146523603 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44341234 chr19:44341227 nonsynonymous SNV 1.000 3 14 hm5C_associated_SNPs_44769 0 0 1 GRWD1 POSTAR2 ENCODE chr19:44341212-44341367
64251 chr2 219269107 219269107 1 + G C UCEC 219269106 + 219269086 219269126 41 GAGCAACTCAGCCGTGTGGACGACGTGTACTCAGTGCTCAG GAGCAACTCAGCCGTGTGGACCACGTGTACTCAGTGCTCAG < 41bp 1 0.302861416634103 1 0.0619842112064362 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269106 chr2:219269107 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_44770 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:219269089-219269112
64251 chr2 170735045 170735045 1 + C T UCEC 170735039 + 170735019 170735059 41 TTCTTCTCCTCCAAAGGTTTCATAGGCGCAACAGGAACTTT TTCTTCTCCTCCAAAGGTTTCATAGGTGCAACAGGAACTTT < 41bp 1 0.130958122033692 1 0.108347564935684 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBR3 ENSG00000144357 CDS Human protein_coding chr2:170735039 chr2:170735045 synonymous SNV . 0 27 hm5C_associated_SNPs_44773 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:170735039-170735067
64251 chr7 155534706 155534706 1 + C T UCEC 155534723 + 155534703 155534743 41 TGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAA TGGTGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAA < 41bp 1 0.709929526545305 1 0.325376033782959 experiment 0.580140946909391 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534723 chr7:155534706 nonsynonymous SNV 0.000 0 4 hm5C_associated_SNPs_44774 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:155534700-155534720
64251 chr2 10560063 10560063 1 + C T UCEC 10560051 + 10560031 10560071 41 AAGATCTACGCCAACTTCTTCCCCTACGGCGACGCTTCCAA AAGATCTACGCCAACTTCTTCCCCTACGGCGATGCTTCCAA < 41bp 1 0.106333272902863 1 0.316024303436279 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560051 chr2:10560063 synonymous SNV . 0 33 hm5C_associated_SNPs_44775 0 0 1 METAP2 POSTAR2 ENCODE chr2:10560056-10560107
64251 chr1 43893267 43893267 1 + G A UCEC 43893251 + 43893231 43893271 41 CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCGTCAG CACCATTCCGTCGAGACTTACAGGCTTACGCTGGGCATCAG < 41bp 1 0.276819355137698 1 0.874479651451111 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43893251 chr1:43893267 nonsynonymous SNV 0.979 0 37 hm5C_associated_SNPs_44776 0 0 3 GRWD1 POSTAR2 ENCODE chr1:43893234-43893330
64251 chr2 74326575 74326575 1 + G A UCEC 74326589 + 74326569 74326609 41 TCCCCCGCGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC TCCCCCACGAGGTCCGACGCCTGCCCGAGCCTGCCAAGTCC < 41bp 1 0.315754497846388 1 0.0595697164535522 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TET3 ENSG00000187605 CDS Human protein_coding chr2:74326589 chr2:74326575 nonsynonymous SNV 0.982 3 7 hm5C_associated_SNPs_44777 0 0 1 BUD13 POSTAR2 ENCODE chr2:74326575-74326602
64251 chr11 66627364 66627364 1 + G A UCEC 66627381 + 66627361 66627401 41 GTGGCCTTGCTGGTTCGGGGCCGGGGGGCCGGAAATGGCCG GTGACCTTGCTGGTTCGGGGCCGGGGGGCCGGAAATGGCCG < 41bp 1 0.620250633084993 1 0.762015461921692 experiment 0.759498733830013 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627381 chr11:66627364 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_44780 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:66627345-66627367
64251 chr2 98263847 98263847 1 + C T UCEC 98263858 + 98263838 98263878 41 CTTCAGGCACCAGGGAAGACCCTAATTTAGTCCCCTCCATC CTTCAGGCATCAGGGAAGACCCTAATTTAGTCCCCTCCATC < 41bp 1 0.30617187527368 1 0.0501925945281982 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control COX5B ENSG00000135940 CDS Human protein_coding chr2:98263858 chr2:98263847 nonsynonymous SNV 0.998 4 10 hm5C_associated_SNPs_44782 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:98263811-98263861
64251 chrX 64956747 64956747 1 + G T UCEC 64956736 + 64956716 64956756 41 TTGAACGGGAGAAGGAGGAGCTGATGGAGAGGCTGAAGCAG TTGAACGGGAGAAGGAGGAGCTGATGGAGAGTCTGAAGCAG < 41bp 1 0.393441401839894 1 0.319944083690643 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956736 chrX:64956747 nonsynonymous SNV 0.994 2 32 hm5C_associated_SNPs_44785 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:64956718-64956750
64251 chr14 37754622 37754622 1 + G A UCEC 37754619 + 37754599 37754639 41 GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGGAAA GGAGAGAGATGAAGCAATTGCACAAGCCAAGCATATGGAAA < 41bp 1 0.306157351703745 1 0.33117488026619 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37754619 chr14:37754622 nonsynonymous SNV 0.872 0 24 hm5C_associated_SNPs_44787 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:37754573-37754632
64251 chr15 75949310 75949310 1 + C T UCEC 75949304 + 75949284 75949324 41 TCTGCTCTGCCTATGCCAGGCGCCTTCGCCAAGGTGAAGGA TCTGCTCTGCCTATGCCAGGCGCCTTTGCCAAGGTGAAGGA < 41bp 1 0.450695332254601 1 0.181981831789017 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SNX33 ENSG00000173548 CDS Human protein_coding chr15:75949304 chr15:75949310 synonymous SNV . 0 27 hm5C_associated_SNPs_44788 0 0 1 BUD13 POSTAR2 ENCODE chr15:75949280-75949336
64251 chr5 65349751 65349751 1 + A C UCEC 65349734 + 65349714 65349754 41 CTCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTGAAAT CTCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTGCAAT < 41bp 1 0.0691277423169064 1 0.0800723433494568 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ERBIN ENSG00000112851 CDS Human protein_coding chr5:65349734 chr5:65349751 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_44789 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65349726-65349831
64251 chr2 48027751 48027751 1 + G A UCEC 48027758 + 48027738 48027778 41 AGGGATCATGGAAGAAGTTGCTGATGGTTTTAAGTCTAAAA AGGGATCATGGAAAAAGTTGCTGATGGTTTTAAGTCTAAAA < 41bp 1 0.221454324477542 1 0.0498495995998383 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MSH6 ENSG00000116062 CDS Human protein_coding chr2:48027758 chr2:48027751 nonsynonymous SNV 0.690 1 14 hm5C_associated_SNPs_44791 1 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027684-48027770
64251 chr1 32620273 32620273 1 + G T UCEC 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAT < 41bp 1 0.190475095376351 1 0.119779229164124 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620273 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_44792 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:32620240-32620276
64251 chr1 32620273 32620273 1 + G T UCEC 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAATA < 41bp 1 0.28977049477 1 0.308539927005768 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620273 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_44793 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:32620240-32620276
64251 chr15 29346703 29346703 1 + G A UCEC 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCAGCGCCTCCCCCTACCGCCT < 41bp 1 0.680997579542155 1 0.691118240356445 experiment 0.63800484091569 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346703 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_44794 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chrX 73044917 73044917 1 - G T UCEC 73044935 - 73044915 73044955 41 ATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTATTCTC ATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTATTATC < 41bp 1 0.3450179773207 1 0.788606584072113 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044935 chrX:73044917 . . 0 39 hm5C_associated_SNPs_44796 0 0 63 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr4 166408640 166408640 1 + G A UCEC 166408636 + 166408616 166408656 41 AGCAACTGTTTTGAGATCACCGTGGAGCTTAGCTGTGAGAA AGCAACTGTTTTGAGATCACCGTGAAGCTTAGCTGTGAGAA < 41bp 1 0.639866595740418 1 0.612635791301727 experiment 0.720266808519164 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CPE ENSG00000109472 CDS Human protein_coding chr4:166408636 chr4:166408640 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_44797 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:166408600-166408640
64251 chr15 52356227 52356227 1 + G A UCEC 52356223 + 52356203 52356243 41 AAGAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGA AAGAAGAAGTACAAGTTGATCCCCAAAAATATTTGGATGGA < 41bp 1 0.661708308208647 1 0.401182740926743 experiment 0.676583383582706 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356223 chr15:52356227 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_44798 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr15 52356227 52356227 1 + G A UCEC 52356225 + 52356205 52356245 41 GAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGA GAAGAAGTACAAGTTGATCCCCAAAAATATTTGGATGGAGA < 41bp 1 0.349806834377434 1 0.414545893669128 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356225 chr15:52356227 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_44799 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr15 52356227 52356227 1 + G A UCEC 52356226 + 52356206 52356246 41 AAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGAT AAGAAGTACAAGTTGATCCCCAAAAATATTTGGATGGAGAT < 41bp 1 0.520584140703735 1 0.445899873971939 experiment 0.958831718592531 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356226 chr15:52356227 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_44800 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:52356168-52356229
64251 chr15 57545617 57545617 1 + C A UCEC 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC CAATTAAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC < 41bp 1 0.229444572456626 1 0.356426477432251 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545617 stopgain 1.000 0 6 hm5C_associated_SNPs_44801 0 0 2 IGF2BP1 POSTAR2 ENCODE chr15:57545594-57545642
64251 chr14 71434938 71434938 1 + T C UCEC 71434922 + 71434902 71434942 41 GTCACGTTTTCAGATTGGATCTGGTTCCTCGCGTCTTGGAA GTCACGTTTTCAGATTGGATCTGGTTCCTCGCGTCTCGGAA < 41bp 1 0.184662361078267 1 0.53335964679718 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71434922 chr14:71434938 synonymous SNV . 0 37 hm5C_associated_SNPs_44805 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr14:71434914-71434940
64251 chrX 73044918 73044918 1 - A C UCEC 73044935 - 73044915 73044955 41 ATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTATTCTC ATGCTGGGTGCTAGAGCTACCAAAGGGGGAAAAGTATGCTC < 41bp 1 0.434306882364567 1 0.847711741924286 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044935 chrX:73044918 . . 0 38 hm5C_associated_SNPs_44807 0 0 63 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr1 39823355 39823355 1 + G T UCEC 39823346 + 39823326 39823366 41 AACATGCATAAGGGAGGCAGCAGCCCCGAGACCCTTCCCTC AACATGCATAAGGGAGGCAGCAGCCCCGATACCCTTCCCTC < 41bp 1 0.147983129408228 1 0.456562668085098 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39823346 chr1:39823355 nonsynonymous SNV 0.290 1 30 hm5C_associated_SNPs_44808 0 0 10 BUD13 POSTAR2 ENCODE chr1:39823348-39823373
64251 chr12 104332150 104332150 1 + A G UCEC 104332136 + 104332116 104332156 41 AGACTGAAACTGTTGAGGAGCCCATGGAGGAAGAAGAAGCA AGACTGAAACTGTTGAGGAGCCCATGGAGGAAGAGGAAGCA < 41bp 1 0.1187570115198 1 0.0831471681594849 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104332136 chr12:104332150 synonymous SNV . 0 35 hm5C_associated_SNPs_44809 0 0 41 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:104332119-104332223
64251 chr4 187122468 187122468 1 + G A UCEC 187122449 + 187122429 187122469 41 CTGATGACGAAGGGAACAGGCTAAGTCATGAAGATATTCGA CTGATGACGAAGGGAACAGGCTAAGTCATGAAGATATTCAA < 41bp 1 0.465770522013726 1 0.0917392671108246 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYP4V2 ENSG00000145476 CDS Human protein_coding chr4:187122449 chr4:187122468 nonsynonymous SNV 0.939 1 40 hm5C_associated_SNPs_44811 0 0 2 PRPF8 POSTAR2 ENCODE chr4:187122429-187122520
64251 chrX 9661229 9661229 1 + T C UCEC 9661244 + 9661224 9661264 41 CGGTTTTGCAAGAATATGGACGGAAGATGGTGAGTTCTGTG CGGTTCTGCAAGAATATGGACGGAAGATGGTGAGTTCTGTG < 41bp 1 0.46962320625562 1 0.220736593008041 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBL1X ENSG00000101849 CDS Human protein_coding chrX:9661244 chrX:9661229 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_44812 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:9661220-9661240
64251 chr3 160137300 160137300 1 + C A UCEC 160137312 + 160137292 160137332 41 AAAAAAATCTGGCAGGATTCCAGGAATATATGGAAGATTGG AAAAAAATATGGCAGGATTCCAGGAATATATGGAAGATTGG < 41bp 1 0.793399593791306 1 0.566958665847778 experiment 0.413200812417388 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMC4 ENSG00000113810 CDS Human protein_coding chr3:160137312 chr3:160137300 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_44813 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160137140-160137330
64251 chr22 31658762 31658762 1 + G T UCEC 31658771 + 31658751 31658791 41 GGGGACACTGAGGAGACGTTCCCTAAGGTGCCACCTCCCAC GGGGACACTGATGAGACGTTCCCTAAGGTGCCACCTCCCAC < 41bp 1 0.317271212514065 1 0.032497376203537 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658771 chr22:31658762 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_44815 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831621 chr22:31658760-31658780
64251 chr12 94563013 94563013 1 + G A UCEC 94563000 + 94562980 94563020 41 ATCCATTCCGACCTGACATCCGTTTATGGCACCGTGGTAAT ATCCATTCCGACCTGACATCCGTTTATGGCACCATGGTAAT < 41bp 1 0.0537423904188249 1 0.0526050925254822 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94563000 chr12:94563013 nonsynonymous SNV 0.999 2 34 hm5C_associated_SNPs_44816 0 0 1 EIF3H POSTAR2 ENCODE chr12:94562954-94563059
64251 chr20 21312442 21312442 1 + T C UCEC 21312451 + 21312431 21312471 41 TCATCATTGTTTATGTGGAGCAGATGGTAAGTTTCTTCTTT TCATCATTGTTCATGTGGAGCAGATGGTAAGTTTCTTCTTT < 41bp 1 0.268151884373648 1 0.0526235699653625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XRN2 ENSG00000088930 CDS Human protein_coding chr20:21312451 chr20:21312442 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_44817 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:21312413-21312452
64251 chr15 40269025 40269025 1 + C T UCEC 40269028 + 40269008 40269048 41 GAGGACGAGCACGGTGGCGTCTTCTCCCAGTCCTTCCTGTA GAGGACGAGCACGGTGGTGTCTTCTCCCAGTCCTTCCTGTA < 41bp 1 0.350227552216246 1 0.110062569379807 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40269028 chr15:40269025 synonymous SNV . 0 18 hm5C_associated_SNPs_44818 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr15:40269024-40269035
64251 chrX 70517767 70517767 1 + C A UCEC 70517781 + 70517761 70517801 41 AGGATTCAAGGGAACCTTCCCTGATGCGGTATATCTCCCAT AGGATTAAAGGGAACCTTCCCTGATGCGGTATATCTCCCAT < 41bp 1 0.653137936965939 1 0.12215855717659 experiment 0.693724126068121 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517781 chrX:70517767 nonsynonymous SNV 0.999 1 7 hm5C_associated_SNPs_44819 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70517715-70517783
64251 chr2 55461997 55461997 1 + C T UCEC 55461979 + 55461959 55461999 41 ATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGT ATTAACAGGAGTCTACTCTTCATCTTGTGTTGAGACTTTGT < 41bp 1 0.153212388645333 1 0.0407131910324097 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55461979 chr2:55461997 nonsynonymous SNV 1.000 1 39 hm5C_associated_SNPs_44820 0 0 3 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr2 55461997 55461997 1 + C T UCEC 55462007 + 55461987 55462027 41 GTTGAGACTTCGTGGTGGTGCTAAGAAAAGGAAGAAGAAGT GTTGAGACTTTGTGGTGGTGCTAAGAAAAGGAAGAAGAAGT < 41bp 1 0.410412655487547 1 0.187788993120193 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462007 chr2:55461997 nonsynonymous SNV 1.000 1 11 hm5C_associated_SNPs_44821 0 0 3 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr11 130013304 130013304 1 + G T UCEC 130013308 + 130013288 130013328 41 AGAACCATGGCTATGAGAACCCCACCTACAAATACCTGGAG AGAACCATGGCTATGATAACCCCACCTACAAATACCTGGAG < 41bp 1 0.178141053563498 1 0.568044781684875 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control APLP2 ENSG00000084234 CDS Human protein_coding chr11:130013308 chr11:130013304 nonsynonymous SNV 0.996 5 17 hm5C_associated_SNPs_44822 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:130013255-130013323
64251 chr2 169626103 169626103 1 + G A UCEC 169626121 + 169626101 169626141 41 GCGACAACCACCAATGGGACCAGTGGTACCAACGGGTATCT GCAACAACCACCAATGGGACCAGTGGTACCAACGGGTATCT < 41bp 1 0.337729105379097 1 0.17455866932869 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169626121 chr2:169626103 synonymous SNV . 0 3 hm5C_associated_SNPs_44823 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:169626072-169626103
64251 chr10 70723156 70723156 1 + C A UCEC 70723167 + 70723147 70723187 41 GACATTCTCCTTTGCCATCCCTTTGATTGAGAAACTTCATG GACATTCTCATTTGCCATCCCTTTGATTGAGAAACTTCATG < 41bp 1 0.127794527698398 1 0.0656410753726959 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70723167 chr10:70723156 synonymous SNV . 0 10 hm5C_associated_SNPs_44824 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70723073-70723156
64251 chr7 27827102 27827102 1 + T A UCEC 27827088 + 27827068 27827108 41 CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAATTTAGAT CCAAGCTTATGTCAGAGGTCCAGACTTTAAAAAAATTAGAT < 41bp 1 0.115160161530281 1 0.342726767063141 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27827088 chr7:27827102 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_44825 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr7:27827085-27827106
64251 chr4 186244868 186244868 1 + T C UCEC 186244882 + 186244862 186244902 41 CCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGAT CCTTCACTTATTGTCAGTGACCTGTATGAGAAATTGTTGAT < 41bp 1 0.108175453917414 1 0.0949963629245758 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SNX25 ENSG00000109762 CDS Human protein_coding chr4:186244882 chr4:186244868 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_44826 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr4:186244849-186244890
64251 chr15 69560903 69560903 1 + G A UCEC 69560923 + 69560903 69560943 41 GACAACATTACCATCTCTACCACAGCCCACATGGCTGCATT AACAACATTACCATCTCTACCACAGCCCACATGGCTGCATT < 41bp 1 0.465454733892412 1 0.256128877401352 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GLCE ENSG00000138604 CDS Human protein_coding chr15:69560923 chr15:69560903 nonsynonymous SNV 0.999 3 1 hm5C_associated_SNPs_44827 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:69560894-69560916
64251 chr5 64881996 64881996 1 + G T UCEC 64881981 + 64881961 64882001 41 GGATCAAATACTAATGGATCCCAGTTTTTCATAACGGTAGT GGATCAAATACTAATGGATCCCAGTTTTTCATAACTGTAGT < 41bp 1 0.261085662270545 1 0.207440108060837 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64881981 chr5:64881996 synonymous SNV . 0 36 hm5C_associated_SNPs_44828 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:64881987-64882008
64251 chr7 129029014 129029014 1 + G A UCEC 129029013 + 129028993 129029033 41 TCAAACAGGCAGAGTTTGGACGAAGAGAAATTGAAATTGCT TCAAACAGGCAGAGTTTGGACAAAGAGAAATTGAAATTGCT < 41bp 1 0.2396139006122 1 0.213562518358231 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:129029013 chr7:129029014 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_44829 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:129028991-129029021
64251 chr12 53415606 53415606 1 + G T UCEC 53415587 + 53415567 53415607 41 TTAATATGGTCCTATGCTCTCAGTCTCTAGGTAACAGGAGA TTAATATGGTCCTATGCTCTCAGTCTCTAGGTAACAGGATA < 41bp 1 0.117830127920778 1 0.559636116027832 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout EIF4B ENSG00000063046 CDS Human protein_coding chr12:53415587 chr12:53415606 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_44830 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:53415559-53415606
64251 chr8 22106596 22106596 1 + T G UCEC 22106604 + 22106584 22106624 41 AAGAGGCCAAGATGAAGGCTCCTCCCAAAGCAGCCAGGAAG AAGAGGCCAAGAGGAAGGCTCCTCCCAAAGCAGCCAGGAAG < 41bp 1 0.023242012754796 1 0.0789967477321625 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control POLR3D ENSG00000168495 CDS Human protein_coding chr8:22106604 chr8:22106596 nonsynonymous SNV 0.998 0 13 hm5C_associated_SNPs_44831 0 0 13 BUD13 POSTAR2 ENCODE chr8:22106549-22106658
64251 chr2 54871685 54871685 1 + G T UCEC 54871687 + 54871667 54871707 41 TCTGATGACTATGGCAAAGACCTGACCAGTGTCAATATCCT TCTGATGACTATGGCAAATACCTGACCAGTGTCAATATCCT < 41bp 1 0.148466617622676 1 0.0400269031524658 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54871687 chr2:54871685 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_44832 0 0 7 FXR1 POSTAR2 ENCODE chr2:54871628-54871719
64251 chr5 147585602 147585602 1 + T C UCEC 147585619 + 147585599 147585639 41 GTGTCTTCAGTCAGGGAGGACAGGTCAGTGCCTATTTTTAT GTGCCTTCAGTCAGGGAGGACAGGTCAGTGCCTATTTTTAT < 41bp 1 0.598950609656128 1 0.482435286045074 experiment 0.802098780687744 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SPINK6 ENSG00000178172 CDS Human protein_coding chr5:147585619 chr5:147585602 nonsynonymous SNV 0.990 0 4 hm5C_associated_SNPs_44833 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:147585582-147585603
64251 chr6 170865981 170865981 1 + C A UCEC 170865967 + 170865947 170865987 41 CTTTAGACTTTTTTCCAAAGCAGCATCACTGTTTCTTGGCG CTTTAGACTTTTTTCCAAAGCAGCATCACTGTTTATTGGCG < 41bp 1 0.433204248084397 1 0.126049101352692 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TBP ENSG00000112592 UTR5 Human protein_coding chr6:170865967 chr6:170865981 . . 0 35 hm5C_associated_SNPs_44834 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr6:170865970-170865994
64251 chr4 103806586 103806586 1 + C T UCEC 103806576 + 103806556 103806596 41 CAGCTTATTGTAGGTGTTGGCGTTCTAAAACGGTAAGATGT CAGCTTATTGTAGGTGTTGGCGTTCTAAAATGGTAAGATGT < 41bp 1 0.0671182319765818 1 0.477890253067017 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CISD2 ENSG00000145354 CDS Human protein_coding chr4:103806576 chr4:103806586 nonsynonymous SNV 0.991 4 31 hm5C_associated_SNPs_44835 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:103806578-103806607
64251 chr22 41322427 41322427 1 + C T UCEC 41322444 + 41322424 41322464 41 CAGCCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT CAGTCAGGCTTCTTGACCTTCACTGCGGCCCACATGCACCT < 41bp 1 0.310356458106417 1 0.324661612510681 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient XPNPEP3 ENSG00000196236 CDS Human protein_coding chr22:41322444 chr22:41322427 synonymous SNV . 0 4 hm5C_associated_SNPs_44836 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:41322384-41322428
64251 chr20 30898921 30898921 1 + G T UCEC 30898904 + 30898884 30898924 41 TTGCAGAGGAGAAGATGAGGCTGCTGAAGGAGAAAGAGAAA TTGCAGAGGAGAAGATGAGGCTGCTGAAGGAGAAAGATAAA < 41bp 1 0.464369904579788 1 0.249228298664093 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898904 chr20:30898921 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_44839 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr20:30898920-30898921
64251 chr6 47576993 47576993 1 + G A UCEC 47576982 + 47576962 47577002 41 AAAAAAATTCCCTGGATGAACTTAGAGCCCAGATTATTGAA AAAAAAATTCCCTGGATGAACTTAGAGCCCAAATTATTGAA < 41bp 1 0.228014490000563 1 0.064485639333725 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47576982 chr6:47576993 synonymous SNV . 0 32 hm5C_associated_SNPs_44840 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr19 42854409 42854409 1 + C T UCEC 42854425 + 42854405 42854445 41 AGTGCCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGG AGTGTCACCTGCCACCTGCGCCAGGGCGGAGCCCATTGCGG < 41bp 1 0.226636296119683 1 0.766969084739685 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42854425 chr19:42854409 nonsynonymous SNV 0.998 0 5 hm5C_associated_SNPs_44841 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:42854406-42854433
64251 chr5 71648510 71648510 1 + A C UCEC 71648516 + 71648496 71648536 41 TGGAAAACCTGATAAAGACTCTAAAAAATGCTGCAGAAGGA TGGAAAACCTGATACAGACTCTAAAAAATGCTGCAGAAGGA < 41bp 1 0.462705151963826 1 0.701010763645172 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71648516 chr5:71648510 nonsynonymous SNV 0.000 0 15 hm5C_associated_SNPs_44842 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:71648500-71648520
64251 chr22 42301560 42301560 1 + G A UCEC 42301542 + 42301522 42301562 41 TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCGAA TCCTCTCCTCCCCGGGCCAGCGGGCAGTGCTGCTGGCCAAA < 41bp 1 0.639338380367889 1 0.840946078300476 experiment 0.721323239264222 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42301542 chr22:42301560 nonsynonymous SNV 0.993 4 39 hm5C_associated_SNPs_44843 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42301560-42301586
64251 chr1 231401124 231401124 1 + C A UCEC 231401132 + 231401112 231401152 41 TGGCAATAAACTCTACTGGGCTGTATTCTCTGAATATGTAA TGGCAATAAACTATACTGGGCTGTATTCTCTGAATATGTAA < 41bp 1 0.365126492927805 1 0.032417893409729 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401132 chr1:231401124 synonymous SNV . 0 13 hm5C_associated_SNPs_44844 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:231401102-231401148
64251 chr6 47580232 47580232 1 + A C UCEC 47580216 + 47580196 47580236 41 ACTTTGTTTTTAGGAAAGAACTGGAAAAACTGCGAAAAGAT ACTTTGTTTTTAGGAAAGAACTGGAAAAACTGCGAACAGAT < 41bp 1 0.683603703996147 1 0.475735813379288 experiment 0.632792592007705 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47580216 chr6:47580232 nonsynonymous SNV 0.952 0 37 hm5C_associated_SNPs_44845 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47580214-47580269
64251 chr8 48874235 48874235 1 + C A UCEC 48874231 + 48874211 48874251 41 TTTCCAGCCCTCCCCAAATGCATTCTTCAGGTGCGTGTCTG TTTCCAGCCCTCCCCAAATGCATTATTCAGGTGCGTGTCTG < 41bp 1 0.363836781220791 1 0.0387251377105713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874231 chr8:48874235 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_44847 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:48874202-48874240
64251 chr1 62455902 62455902 1 + G T UCEC 62455922 + 62455902 62455942 41 GATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGA TATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGA < 41bp 1 0.198430696165771 1 0.461386680603027 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62455922 chr1:62455902 nonsynonymous SNV 1.000 3 1 hm5C_associated_SNPs_44850 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:62455900-62455920
64251 chr7 100485399 100485399 1 + T C UCEC 100485418 + 100485398 100485438 41 GTTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC GCTTTTTAACAACTTCCTCACTGATGCTAAGCGCCCAGCTC < 41bp 1 0.478962086814542 1 0.1280857026577 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRRT ENSG00000087087 CDS Human protein_coding chr7:100485418 chr7:100485399 nonsynonymous SNV 0.982 4 2 hm5C_associated_SNPs_44851 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:100485341-100485401
64251 chr6 7566653 7566653 1 + A C UCEC 7566648 + 7566628 7566668 41 GAAGTTAAAGAAAAAGAGCTCAATAAGCTGAAACAAGAAAG GAAGTTAAAGAAAAAGAGCTCAATACGCTGAAACAAGAAAG < 41bp 1 0.128272404204487 1 0.388165682554245 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7566648 chr6:7566653 nonsynonymous SNV 1.000 3 26 hm5C_associated_SNPs_44852 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7566616-7566697
64251 chr11 4142939 4142939 1 + C A UCEC 4142924 + 4142904 4142944 41 AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATATTTTC < 41bp 1 0.557447879520019 1 0.464372158050537 experiment 0.885104240959962 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142924 chr11:4142939 nonsynonymous SNV 0.995 2 36 hm5C_associated_SNPs_44867 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:4142923-4142948
64251 chr15 78841250 78841250 1 + G T UCEC 78841245 + 78841225 78841265 41 AAGAAGAAGCCAAAGCTGAGCGTGAGAAGAAAGAAAAAGAA AAGAAGAAGCCAAAGCTGAGCGTGATAAGAAAGAAAAAGAA < 41bp 1 0.648914961529638 1 0.478146433830261 experiment 0.702170076940723 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PSMA4 ENSG00000041357 CDS Human protein_coding chr15:78841245 chr15:78841250 nonsynonymous SNV 0.998 1 26 hm5C_associated_SNPs_44868 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:78841131-78841329
64251 chr7 116339968 116339968 1 + G T UCEC 116339981 + 116339961 116340001 41 CACACAAGAATAATCAGGTTCTGTTCCATAAACTCTGGATT CACACAATAATAATCAGGTTCTGTTCCATAAACTCTGGATT < 41bp 1 0.129426854427943 1 0.0553376972675323 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control MET ENSG00000105976 CDS Human protein_coding chr7:116339981 chr7:116339968 nonsynonymous SNV 0.776 4 8 hm5C_associated_SNPs_44869 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116339920-116340001
64251 chr1 10435347 10435347 1 + G A UCEC 10435355 + 10435335 10435375 41 GCACAAAGCACCGTGGGGTCCTTTTGCAGGCCCTCAATGAC GCACAAAGCACCATGGGGTCCTTTTGCAGGCCCTCAATGAC < 41bp 1 0.0331970968829117 1 0.0328662395477295 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10435355 chr1:10435347 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_44871 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:10435346-10435347
64251 chr12 6646132 6646132 1 + G A UCEC 6646142 + 6646122 6646162 41 CGCTGAGTACGTCGTGGAGTCCACTGGCGTCTTCACCACCA CGCTGAGTACATCGTGGAGTCCACTGGCGTCTTCACCACCA < 41bp 1 0.430653111816148 1 0.098168671131134 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646142 chr12:6646132 nonsynonymous SNV 0.290 1 11 hm5C_associated_SNPs_44872 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6646120-6646140
64251 chrX 70516427 70516427 1 + T C UCEC 70516419 + 70516399 70516439 41 TTGTTCTTTCTTCCAGATTTCCTCGTCCTGTGACTGTGGAG TTGTTCTTTCTTCCAGATTTCCTCGTCCCGTGACTGTGGAG < 41bp 1 0.106401877503755 1 0.107641935348511 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516419 chrX:70516427 synonymous SNV . 0 29 hm5C_associated_SNPs_44874 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chrX 70516427 70516427 1 + T C UCEC 70516440 + 70516420 70516460 41 CTCGTCCTGTGACTGTGGAGCCCATGGACCAGTTAGATGAT CTCGTCCCGTGACTGTGGAGCCCATGGACCAGTTAGATGAT < 41bp 1 0.0919851570572079 1 0.0385313928127289 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70516440 chrX:70516427 synonymous SNV . 0 8 hm5C_associated_SNPs_44875 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70516400-70516460
64251 chr14 21967277 21967277 1 - C T UCEC 21967278 - 21967258 21967298 41 TAGTTTTTATTTCCTAGGTTCGTTCCACCAGTCATAAACCA TAGTTTTTATTTCCTAGGTTCATTCCACCAGTCATAAACCA < 41bp 1 0.0161813465746111 1 0.0728622376918793 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control METTL3 ENSG00000165819 CDS Human protein_coding chr14:21967278 chr14:21967277 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_44876 0 0 6 U2AF2 POSTAR2 GSE83923,CSM2221659 chr14:21967260-21967280
64251 chr10 91532536 91532536 1 + G A UCEC 91532517 + 91532497 91532537 41 CAAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAAACGG CAAGTAAAGAAAATGTGTCTCAACCAAAACGAGCCAAACAG < 41bp 1 0.30050524179714 1 0.404503762722015 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control KIF20B ENSG00000138182 CDS Human protein_coding chr10:91532517 chr10:91532536 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_44879 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:91532513-91532545
64251 chrX 70360551 70360551 1 + C T UCEC 70360532 + 70360512 70360552 41 ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCG ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGTG < 41bp 1 0.768361942873917 1 0.887716174125671 experiment 0.463276114252166 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout MED12 ENSG00000184634 CDS Human protein_coding chrX:70360532 chrX:70360551 synonymous SNV . 0 40 hm5C_associated_SNPs_44880 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:70360523-70360557
64251 chr19 49464798 49464798 1 + C A UCEC 49464797 + 49464777 49464817 41 CCCTGTCTCCAGGACGGCCTCCTCTCCTACTTTGGGACGCC CCCTGTCTCCAGGACGGCCTCATCTCCTACTTTGGGACGCC < 41bp 1 0.299391732363754 1 0.255930602550507 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BAX ENSG00000087088 CDS Human protein_coding chr19:49464797 chr19:49464798 nonsynonymous SNV 0.922 1 22 hm5C_associated_SNPs_44881 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr19 6362538 6362538 1 + T A UCEC 6362549 + 6362529 6362569 41 ATCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTC ATCCACATGAACATCAACAGCCCTGGTGAGCAGGGTCTTTC < 41bp 1 0.200587983821839 1 0.0302045345306396 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656;ENSG00000125656 exonic;splicing Human other chr19:6362549 chr19:6362538 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_44882 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr19 6362538 6362538 1 + T A UCEC 6362550 + 6362530 6362570 41 TCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTCC TCCACATGAACATCAACAGCCCTGGTGAGCAGGGTCTTTCC < 41bp 1 0.204076577969798 1 0.0814743340015411 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656;ENSG00000125656 exonic;splicing Human other chr19:6362550 chr19:6362538 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_44883 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr19 14561842 14561842 1 + C T UCEC 14561839 + 14561819 14561859 41 GAAGAGCTCGCTGCGGCCTCCTCCGCTGCCTTCAGCACCCG GAAGAGCTCGCTGCGGCCTCCTCTGCTGCCTTCAGCACCCG < 41bp 1 0.431453617025987 1 0.171069473028183 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561839 chr19:14561842 synonymous SNV . 0 24 hm5C_associated_SNPs_44884 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14561828-14561863
64251 chr10 17278332 17278332 1 + C G UCEC 17278316 + 17278296 17278336 41 CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTCAAAA CTAATCTGGATTCACTCCCTCTGGTTGATACCCACTGAAAA < 41bp 1 0.290338024438767 1 0.67701667547226 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17278316 chr10:17278332 stopgain 0.998 0 37 hm5C_associated_SNPs_44886 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:17278292-17278381
64251 chr17 78346485 78346485 1 + C T UCEC 78346488 + 78346468 78346508 41 GTGGCCCGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTT GTGGCCCGGATCCGCCTTTGCCTCGACAGAGCTGCAGATTT < 41bp 1 0.0554633722679774 1 0.182100385427475 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346488 chr17:78346485 synonymous SNV . 0 18 hm5C_associated_SNPs_44887 0 0 5 DDX24 POSTAR2 ENCODE chr17:78346460-78346494
64251 chr17 78346485 78346485 1 + C T UCEC 78346494 + 78346474 78346514 41 CGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTTCCTCTC CGGATCCGCCTTTGCCTCGACAGAGCTGCAGATTTCCTCTC < 41bp 1 0.171070334715346 1 0.659572660923004 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346494 chr17:78346485 synonymous SNV . 0 12 hm5C_associated_SNPs_44888 0 0 5 DDX24 POSTAR2 ENCODE chr17:78346460-78346494
64251 chrX 2641355 2641355 1 + G A UCEC 2641365 + 2641345 2641385 41 TGTCTTGCAGGAAAAGGAGGCAGTGATGGTGGAGGCAGCCA TGTCTTGCAGAAAAAGGAGGCAGTGATGGTGGAGGCAGCCA < 41bp 1 0.298238341903801 1 0.504561424255371 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD99 ENSG00000002586 CDS Human protein_coding chrX:2641365 chrX:2641355 nonsynonymous SNV 0.034 1 11 hm5C_associated_SNPs_44889 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:2641340-2641360
64251 chr7 91714879 91714879 1 + G C UCEC 91714864 + 91714844 91714884 41 GGTGCTTTCTCTCACTGAGTCTCCCTATAGTGATGGAGAGG GGTGCTTTCTCTCACTGAGTCTCCCTATAGTGATGCAGAGG < 41bp 1 0.22162206269909 1 0.337579429149628 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714864 chr7:91714879 nonsynonymous SNV 0.903 0 36 hm5C_associated_SNPs_44890 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:91714875-91714898
64251 chr7 91714879 91714879 1 + G C UCEC 91714867 + 91714847 91714887 41 GCTTTCTCTCACTGAGTCTCCCTATAGTGATGGAGAGGACC GCTTTCTCTCACTGAGTCTCCCTATAGTGATGCAGAGGACC < 41bp 1 0.0191573367877879 1 0.0749336779117584 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714867 chr7:91714879 nonsynonymous SNV 0.903 0 33 hm5C_associated_SNPs_44891 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:91714875-91714898
64251 chr7 91714879 91714879 1 + G C UCEC 91714868 + 91714848 91714888 41 CTTTCTCTCACTGAGTCTCCCTATAGTGATGGAGAGGACCA CTTTCTCTCACTGAGTCTCCCTATAGTGATGCAGAGGACCA < 41bp 1 0.231247406185427 1 0.37359482049942 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714868 chr7:91714879 nonsynonymous SNV 0.903 0 32 hm5C_associated_SNPs_44892 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:91714875-91714898
64251 chr7 91714879 91714879 1 + G C UCEC 91714891 + 91714871 91714911 41 TAGTGATGGAGAGGACCATTCTATTCAGCAGGTTTCAGAAC TAGTGATGCAGAGGACCATTCTATTCAGCAGGTTTCAGAAC < 41bp 1 0.161973199808012 1 0.169393837451935 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714891 chr7:91714879 nonsynonymous SNV 0.903 0 9 hm5C_associated_SNPs_44893 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:91714875-91714898
64251 chr7 91714879 91714879 1 + G C UCEC 91714896 + 91714876 91714916 41 ATGGAGAGGACCATTCTATTCAGCAGGTTTCAGAACCTTGG ATGCAGAGGACCATTCTATTCAGCAGGTTTCAGAACCTTGG < 41bp 1 0.760626731589974 1 0.485896915197372 experiment 0.478746536820053 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91714896 chr7:91714879 nonsynonymous SNV 0.903 0 4 hm5C_associated_SNPs_44894 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:91714875-91714898
64251 chr17 33328361 33328361 1 + G A UCEC 33328374 + 33328354 33328394 41 TTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAA TTCCCTCACTGCACCCGAATCCGAGATGATAAGGACTGGAA < 41bp 1 0.416193240835341 1 0.760663151741028 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LIG3 ENSG00000005156 CDS Human protein_coding chr17:33328374 chr17:33328361 nonsynonymous SNV 0.997 4 8 hm5C_associated_SNPs_44898 0 0 1 DGCR8 POSTAR2 GSE39086,GSM955513 chr17:33328360-33328380
64251 chr16 845834 845834 1 + C T UCEC 845820 + 845800 845840 41 TGCTCCTGGACATTCTTGCACCCAAGCTCCGCCCCGTGAGT TGCTCCTGGACATTCTTGCACCCAAGCTCCGCCCTGTGAGT < 41bp 1 0.253498322934129 1 0.0873498320579529 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845820 chr16:845834 synonymous SNV . 0 35 hm5C_associated_SNPs_44899 0 0 1 BUD13 POSTAR2 ENCODE chr16:845811-845834
64251 chr19 49593570 49593570 1 + C A UCEC 49593563 + 49593543 49593583 41 CCCAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCTGAA CCCAGGACCCTCGAGATGCCCCTCCTCAAACTCGTGCTGAA < 41bp 1 0.05887474043732 1 0.0760475397109985 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593563 chr19:49593570 nonsynonymous SNV 0.997 4 28 hm5C_associated_SNPs_44900 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr19 49593570 49593570 1 + C A UCEC 49593564 + 49593544 49593584 41 CCAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCTGAAA CCAGGACCCTCGAGATGCCCCTCCTCAAACTCGTGCTGAAA < 41bp 1 0.213338705253746 1 0.150329977273941 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593564 chr19:49593570 nonsynonymous SNV 0.997 4 27 hm5C_associated_SNPs_44901 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr19 49593570 49593570 1 + C A UCEC 49593585 + 49593565 49593605 41 TCCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGA TCCTCAAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGA < 41bp 1 0.727843618112651 1 0.3848577439785 experiment 0.544312763774698 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593585 chr19:49593570 nonsynonymous SNV 0.997 4 6 hm5C_associated_SNPs_44902 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr19 49593570 49593570 1 + C A UCEC 49593586 + 49593566 49593606 41 CCTCCAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGAG CCTCAAACTCGTGCTGAAACCCGAGAGGAGCGCATGGAGAG < 41bp 1 0.51353713161137 1 0.747860074043274 experiment 0.972925736777261 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593586 chr19:49593570 nonsynonymous SNV 0.997 4 5 hm5C_associated_SNPs_44903 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr16 30941507 30941507 1 + T G UCEC 30941505 + 30941485 30941525 41 GCCAGCTGCTGGAACGGGTGCCTGACACCTCCTCTTCCTCC GCCAGCTGCTGGAACGGGTGCCGGACACCTCCTCTTCCTCC < 41bp 1 0.471552652526265 1 0.410319030284882 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941505 chr16:30941507 synonymous SNV . 0 23 hm5C_associated_SNPs_44905 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30941504-30941531
64251 chr12 105553810 105553810 1 + C T UCEC 105553821 + 105553801 105553841 41 GATCACACACGAAATTCTGCCGAAGGCACAGAATATTTCAA GATCACACATGAAATTCTGCCGAAGGCACAGAATATTTCAA < 41bp 1 0.4100378628403 1 0.553618907928467 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105553821 chr12:105553810 stopgain 1.000 1 10 hm5C_associated_SNPs_44906 0 0 1 PPIG POSTAR2 ENCODE chr12:105553791-105553828
64251 chr6 168363204 168363204 1 + G A UCEC 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAGGCAAGAGGAAGAGCGCCAGCGGCAGGAGGAGGAGCG < 41bp 1 0.171104938371182 1 0.470098286867142 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363204 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_44907 0 0 7 FTO POSTAR2 ENCODE chr6:168363151-168363228
64251 chr6 117869570 117869570 1 + C A UCEC 117869589 + 117869569 117869609 41 CCTCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAAT CATCAACCAGACGGCCATGACTGCCCTTTTGTGAACACAAT < 41bp 1 0.379168487614228 1 0.166501581668854 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869589 chr6:117869570 nonsynonymous SNV 0.897 1 2 hm5C_associated_SNPs_44910 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:117869538-117869598
64251 chr17 27049885 27049885 1 + C T UCEC 27049866 + 27049846 27049886 41 CAAGCACCAGATTAAACAGGCTGTGAAGAAGCTGTATGACA CAAGCACCAGATTAAACAGGCTGTGAAGAAGCTGTATGATA < 41bp 1 0.248931830552775 1 0.105336487293243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27049866 chr17:27049885 synonymous SNV . 0 40 hm5C_associated_SNPs_44912 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr17:27049841-27049900
64251 chr17 27049885 27049885 1 + C T UCEC 27049896 + 27049876 27049916 41 GCTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTC GCTGTATGATATTGATGTGGCCAAGGTCAACACCCTGATTC < 41bp 1 0.453771408436168 1 0.415976285934448 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27049896 chr17:27049885 synonymous SNV . 0 10 hm5C_associated_SNPs_44913 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr17:27049841-27049900
64251 chr17 27049885 27049885 1 + C T UCEC 27049897 + 27049877 27049917 41 CTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCG CTGTATGATATTGATGTGGCCAAGGTCAACACCCTGATTCG < 41bp 1 0.716755815654406 1 0.472933351993561 experiment 0.566488368691189 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL23A ENSG00000198242 CDS Human protein_coding chr17:27049897 chr17:27049885 synonymous SNV . 0 9 hm5C_associated_SNPs_44914 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr17:27049841-27049900
64251 chr3 10320677 10320677 1 + C T UCEC 10320688 + 10320668 10320708 41 GCTGCCTTGCGTGAGAACACCAGTCGCCTCTACAGTCTTTA GCTGCCTTGTGTGAGAACACCAGTCGCCTCTACAGTCTTTA < 41bp 1 0.18172604027565 1 0.102928280830383 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320688 chr3:10320677 nonsynonymous SNV 0.710 3 10 hm5C_associated_SNPs_44915 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10320659-10320697
64251 chr3 138341056 138341056 1 + C A UCEC 138341068 + 138341048 138341088 41 TGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGG TGGATGTTAAAATTAGTGGGCAAAGAAACATTCTATGTTGG < 41bp 1 0.132526369967977 1 0.240726262331009 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138341068 chr3:138341056 nonsynonymous SNV 0.990 4 9 hm5C_associated_SNPs_44916 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:138341027-138341057
64251 chr11 107966289 107966289 1 + T G UCEC 107966308 + 107966288 107966328 41 ATTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCA AGTTGGAGGTAACCACGTTTCAGCTCGCTGTATTGTTTGCA < 41bp 1 0.497609484628095 1 0.501153707504272 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CUL5 ENSG00000166266 CDS Human protein_coding chr11:107966308 chr11:107966289 nonsynonymous SNV 0.998 1 2 hm5C_associated_SNPs_44918 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:107966259-107966343
64251 chr3 51737776 51737776 1 + T C UCEC 51737759 + 51737739 51737779 41 GGAGCTGACACAATGAGTGACACGAGTTCTGTAAGCTTGGA GGAGCTGACACAATGAGTGACACGAGTTCTGTAAGCTCGGA < 41bp 1 0.786407456832204 1 0.386347323656082 experiment 0.427185086335592 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TEX264 ENSG00000164081 CDS Human protein_coding chr3:51737759 chr3:51737776 nonsynonymous SNV 0.991 0 38 hm5C_associated_SNPs_44922 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:51737752-51737798
64251 chr3 51737776 51737776 1 + T C UCEC 51737767 + 51737747 51737787 41 CACAATGAGTGACACGAGTTCTGTAAGCTTGGAAGTGAGCC CACAATGAGTGACACGAGTTCTGTAAGCTCGGAAGTGAGCC < 41bp 1 0.563998920008364 1 0.262880951166153 experiment 0.872002159983271 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TEX264 ENSG00000164081 CDS Human protein_coding chr3:51737767 chr3:51737776 nonsynonymous SNV 0.991 0 30 hm5C_associated_SNPs_44923 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:51737752-51737798
64251 chr2 214149312 214149312 1 + G A UCEC 214149300 + 214149280 214149320 41 GCAGCCGGGGACGCGAGGGACACGGCGGACGCGGTGGCGGC GCAGCCGGGGACGCGAGGGACACGGCGGACGCAGTGGCGGC < 41bp 1 0.738203869531713 1 0.496046632528305 experiment 0.523592260936574 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPAG16 ENSG00000144451 CDS Human protein_coding chr2:214149300 chr2:214149312 synonymous SNV . 0 33 hm5C_associated_SNPs_44924 0 0 7 EFTUD2 POSTAR2 ENCODE chr2:214149179-214149349
64251 chr21 45560184 45560184 1 + C T UCEC 45560204 + 45560184 45560224 41 CGTGTCCTGAAGGAGTTCCACCAGGCCGGGAAGCCCATCGG TGTGTCCTGAAGGAGTTCCACCAGGCCGGGAAGCCCATCGG < 41bp 1 0.651684747914252 1 0.329770624637604 experiment 0.696630504171496 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45560204 chr21:45560184 nonsynonymous SNV 0.028 4 1 hm5C_associated_SNPs_44925 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45560141-45560202
64251 chr19 19645937 19645937 1 + G T UCEC 19645936 + 19645916 19645956 41 CAGTGGGGCTGGTCTGTGCCCGGCACCTGCGGGTGTTTGTA CAGTGGGGCTGGTCTGTGCCCTGCACCTGCGGGTGTTTGTA < 41bp 1 0.719520439574625 1 0.445620656013489 experiment 0.560959120850751 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19645936 chr19:19645937 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_44926 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:19645906-19645954
64251 chr8 22054841 22054841 1 + A G UCEC 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCCGGGGTCATCACCTCCCAGTACAACAACATGCGCG < 41bp 1 0.185306165884967 1 0.172325432300568 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054841 nonsynonymous SNV 0.992 0 9 hm5C_associated_SNPs_44927 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chr20 60708474 60708474 1 + G T UCEC 60708483 + 60708463 60708503 41 TGGGACCACCCGTCGCAACCCCACTTCCCACAGGGCCGGGA TGGGACCACCCTTCGCAACCCCACTTCCCACAGGGCCGGGA < 41bp 1 0.240895800875747 1 0.0258095562458038 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LSM14B ENSG00000149657 CDS Human protein_coding chr20:60708483 chr20:60708474 nonsynonymous SNV 0.849 3 12 hm5C_associated_SNPs_44928 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:60708438-60708494
64251 chr12 104327825 104327825 1 + A G UCEC 104327808 + 104327788 104327828 41 AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAAATC AGAGAAGAGTTGGTTAAAAACCTTGGTACCATAGCCAGATC < 41bp 1 0.257695150154348 1 0.0770439803600311 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104327808 chr12:104327825 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_44929 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:104327731-104327851
64251 chr1 212970477 212970477 1 + G T UCEC 212970488 + 212970468 212970508 41 TCCTGCCATGCTTGGGTGTTCATCCAGTTCAAGGACTTCCA TCCTGCCATTCTTGGGTGTTCATCCAGTTCAAGGACTTCCA < 41bp 1 0.250856236422657 1 0.0416581630706787 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TATDN3 ENSG00000203705 CDS Human protein_coding chr1:212970488 chr1:212970477 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_44930 0 0 1 SF3B4 POSTAR2 ENCODE chr1:212970450-212970580
64251 chr17 18167935 18167935 1 + C T UCEC 18167953 + 18167933 18167973 41 TGCTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC TGTTCATCGGCAGCCTGGAGCAGGCCAGCCTGCCCTGCCAC < 41bp 1 0.684229971540983 1 0.924288392066956 experiment 0.631540056918034 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control MIEF2 ENSG00000177427 CDS Human protein_coding chr17:18167953 chr17:18167935 nonsynonymous SNV 0.278 4 3 hm5C_associated_SNPs_44931 0 0 2 RBM15 POSTAR2 ENCODE chr17:18167917-18167948
64251 chr2 99985889 99985889 1 + A C UCEC 99985879 + 99985859 99985899 41 TGAATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAAC TGAATCAATGGAATTATGTGCTGCTGTAGACGTTATGGAAC < 41bp 1 0.438618936904223 1 0.25346428155899 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985879 chr2:99985889 nonsynonymous SNV 0.385 0 31 hm5C_associated_SNPs_44932 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985889 99985889 1 + A C UCEC 99985882 + 99985862 99985902 41 ATCAATGGAATTATGTGCTGCTGTAGAAGTTATGGAACAAG ATCAATGGAATTATGTGCTGCTGTAGACGTTATGGAACAAG < 41bp 1 0.346541094571534 1 0.388825565576553 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985882 chr2:99985889 nonsynonymous SNV 0.385 0 28 hm5C_associated_SNPs_44933 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985889 99985889 1 + A C UCEC 99985899 + 99985879 99985919 41 CTGCTGTAGAAGTTATGGAACAAGGAGTACCAGAAAAGGAA CTGCTGTAGACGTTATGGAACAAGGAGTACCAGAAAAGGAA < 41bp 1 0.651410339553413 1 0.429660052061081 experiment 0.697179320893174 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985899 chr2:99985889 nonsynonymous SNV 0.385 0 11 hm5C_associated_SNPs_44934 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 99985889 99985889 1 + A C UCEC 99985908 + 99985888 99985928 41 AAGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGACACCA ACGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGACACCA < 41bp 1 0.600833801137554 1 0.224275439977646 experiment 0.798332397724893 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985908 chr2:99985889 nonsynonymous SNV 0.385 0 2 hm5C_associated_SNPs_44935 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99985859-99985908
64251 chr2 74074753 74074753 1 + A G UCEC 74074746 + 74074726 74074766 41 AGTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCA AGTGCCTGACTTGGAGAAGCCCTCCTTGGATGTGTTCCCCA < 41bp 1 0.129953975044437 1 0.0804388821125031 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074746 chr2:74074753 synonymous SNV . 0 28 hm5C_associated_SNPs_44936 0 0 5 AGGF1 POSTAR2 ENCODE chr2:74074685-74074757
64251 chr2 74074753 74074753 1 + A G UCEC 74074747 + 74074727 74074767 41 GTGCCTGACTTGGAGAAGCCCTCCTTAGATGTGTTCCCCAC GTGCCTGACTTGGAGAAGCCCTCCTTGGATGTGTTCCCCAC < 41bp 1 0.711900099453556 1 0.85089647769928 experiment 0.576199801092888 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074747 chr2:74074753 synonymous SNV . 0 27 hm5C_associated_SNPs_44937 0 0 5 AGGF1 POSTAR2 ENCODE chr2:74074685-74074757
64251 chr1 161751785 161751785 1 + T C UCEC 161751776 + 161751756 161751796 41 GACATTTGGGACATCAACAACCAAATCTGTACAGGTAATTA GACATTTGGGACATCAACAACCAAATCTGCACAGGTAATTA < 41bp 1 0.190321213998021 1 0.140946269035339 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161751776 chr1:161751785 synonymous SNV . 0 30 hm5C_associated_SNPs_44939 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:161751765-161751788
64251 chr22 43558925 43558925 1 + C T UCEC 43558927 + 43558907 43558947 41 CCTGGCCTGGCTGGCCTTCACGACCACACTCAACTACTGCG CCTGGCCTGGCTGGCCTTTACGACCACACTCAACTACTGCG < 41bp 1 0.587767817287089 1 0.085856705904007 experiment 0.824464365425821 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TSPO ENSG00000100300 CDS Human protein_coding chr22:43558927 chr22:43558925 nonsynonymous SNV . 0 19 hm5C_associated_SNPs_44940 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr11 70260720 70260720 1 + G A UCEC 70260737 + 70260717 70260757 41 TTCGGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCA TTCAGAGGCAAGTTTGGTGTCCAGATGGACAGAGTTGATCA < 41bp 1 0.712618745311296 1 0.359563887119293 experiment 0.574762509377409 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CTTN ENSG00000085733 CDS Human protein_coding chr11:70260737 chr11:70260720 nonsynonymous SNV 0.843 4 4 hm5C_associated_SNPs_44941 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:70260684-70260720
64251 chr14 60592509 60592509 1 + T C UCEC 60592489 + 60592469 60592509 41 TGATGAAAAGTGGAAGGAAGCAATTTTACAAGAAAAGCCAT TGATGAAAAGTGGAAGGAAGCAATTTTACAAGAAAAGCCAC < 41bp 1 0.313192264584483 1 0.257998615503311 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60592489 chr14:60592509 nonsynonymous SNV 0.997 2 41 hm5C_associated_SNPs_44942 0 0 1 BUD13 POSTAR2 ENCODE chr14:60592487-60592557
64251 chr8 26223917 26223917 1 + T C UCEC 26223916 + 26223896 26223936 41 TGAATGTTGTTGGAATGGATCTGACAGGTAATTAAGTCAAA TGAATGTTGTTGGAATGGATCCGACAGGTAATTAAGTCAAA < 41bp 1 0.0775516702545646 1 0.159130722284317 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223916 chr8:26223917 synonymous SNV . 0 22 hm5C_associated_SNPs_44945 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr8 26223917 26223917 1 + T C UCEC 26223920 + 26223900 26223940 41 TGTTGTTGGAATGGATCTGACAGGTAATTAAGTCAAACCTC TGTTGTTGGAATGGATCCGACAGGTAATTAAGTCAAACCTC < 41bp 1 0.377537934772915 1 0.630474090576172 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control PPP2R2A ENSG00000221914 CDS Human protein_coding chr8:26223920 chr8:26223917 synonymous SNV . 0 18 hm5C_associated_SNPs_44946 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr8:26223801-26223922
64251 chr19 1434846 1434846 1 + G A UCEC 1434836 + 1434816 1434856 41 TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGG TCCGTGCCAGGGTCGGGGGGCCCCCCCGCCAGCGGCAGCGG < 41bp 1 0.326800809936068 1 0.126468300819397 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434836 chr19:1434846 nonsynonymous SNV 0.824 1 31 hm5C_associated_SNPs_44947 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434846 1434846 1 + G A UCEC 1434837 + 1434817 1434857 41 CCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGC CCGTGCCAGGGTCGGGGGGCCCCCCCGCCAGCGGCAGCGGC < 41bp 1 0.382462366957243 1 0.10453999042511 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434837 chr19:1434846 nonsynonymous SNV 0.824 1 30 hm5C_associated_SNPs_44948 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434846 1434846 1 + G A UCEC 1434838 + 1434818 1434858 41 CGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCT CGTGCCAGGGTCGGGGGGCCCCCCCGCCAGCGGCAGCGGCT < 41bp 1 0.488471866410687 1 0.25387167930603 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434838 chr19:1434846 nonsynonymous SNV 0.824 1 29 hm5C_associated_SNPs_44949 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr19 1434846 1434846 1 + G A UCEC 1434839 + 1434819 1434859 41 GTGCCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTT GTGCCAGGGTCGGGGGGCCCCCCCGCCAGCGGCAGCGGCTT < 41bp 1 0.722790433006703 1 0.0944096744060516 experiment 0.554419133986594 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434839 chr19:1434846 nonsynonymous SNV 0.824 1 28 hm5C_associated_SNPs_44950 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr2 182784138 182784138 1 + C T UCEC 182784123 + 182784103 182784143 41 GCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGCGCATG GCCTGCTGGGCCTGGAGGAGCAGCTTCGTGCTGTGTGCATG < 41bp 1 0.740723480341158 1 0.095967173576355 experiment 0.518553039317684 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182784123 chr2:182784138 nonsynonymous SNV 0.000 2 36 hm5C_associated_SNPs_44951 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:182784137-182784138
64251 chr19 41306553 41306553 1 + G T UCEC 41306542 + 41306522 41306562 41 TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGGAGCCTGAGC TCAGTTACCAGGGTCTTCGTCAGAGCCCTTGTAGCCTGAGC < 41bp 1 0.635020100016916 1 0.937201619148254 experiment 0.729959799966168 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control EGLN2 ENSG00000269858 CDS Human protein_coding chr19:41306542 chr19:41306553 stopgain 0.967 0 32 hm5C_associated_SNPs_44952 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41306540-41306569
64251 chr11 68204381 68204381 1 + G A UCEC 68204395 + 68204375 68204415 41 AGTTCCGGTGTGCGAGCGGCCAGTGTGTCCTCATCAAACAG AGTTCCAGTGTGCGAGCGGCCAGTGTGTCCTCATCAAACAG < 41bp 1 0.41707336995998 1 0.438703924417496 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP5 ENSG00000162337 CDS Human protein_coding chr11:68204395 chr11:68204381 nonsynonymous SNV 0.970 2 7 hm5C_associated_SNPs_44953 0 0 2 DDX24 POSTAR2 ENCODE chr11:68204356-68204381
64251 chr8 27288495 27288495 1 + G A UCEC 27288507 + 27288487 27288527 41 CCGGCTTCGCCAACATCGACCAGGAGACCTACCGCTGTGAA CCGGCTTCACCAACATCGACCAGGAGACCTACCGCTGTGAA < 41bp 1 0.665369767891438 1 0.964138388633728 experiment 0.669260464217125 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTK2B ENSG00000120899 CDS Human protein_coding chr8:27288507 chr8:27288495 nonsynonymous SNV 0.993 1 9 hm5C_associated_SNPs_44954 0 0 2 DDX24 POSTAR2 ENCODE chr8:27288413-27288536
64251 chr1 10328300 10328300 1 + G T UCEC 10328306 + 10328286 10328326 41 AAACACGATAATGAGACCAACCTTTCCACTGAGAAGGTAGG AAACACGATAATGATACCAACCTTTCCACTGAGAAGGTAGG < 41bp 1 0.00268531252647476 1 0.0418626070022583 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10328306 chr1:10328300 nonsynonymous SNV 0.925 2 15 hm5C_associated_SNPs_44957 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:10328294-10328321
64251 chr1 86048107 86048107 1 + A T UCEC 86048095 + 86048075 86048115 41 GTCTTCCCTCTTATATGTCTCTAGTTTTTGGAATGGAGCCT GTCTTCCCTCTTATATGTCTCTAGTTTTTGGATTGGAGCCT < 41bp 1 0.257443229183908 1 0.319637537002563 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048095 chr1:86048107 nonsynonymous SNV 0.962 0 33 hm5C_associated_SNPs_44958 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048100-86048180
64251 chr12 110474085 110474085 1 + C T UCEC 110474069 + 110474049 110474089 41 ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAAT ACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTTGAAT < 41bp 1 0.0313281594499055 1 0.0497825741767883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110474069 chr12:110474085 nonsynonymous SNV 0.995 1 37 hm5C_associated_SNPs_44959 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:110474066-110474086
64251 chr3 47361148 47361148 1 + G A UCEC 47361152 + 47361132 47361172 41 TTTGCCCACAGATTGGGGACCACAAATTCAGTGCCCACCGG TTTGCCCACAGATTGGAGACCACAAATTCAGTGCCCACCGG < 41bp 1 0.58228118416686 1 0.1956847012043 experiment 0.83543763166628 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361152 chr3:47361148 synonymous SNV . 0 17 hm5C_associated_SNPs_44961 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:47361142-47361162
64251 chr5 132400724 132400724 1 + A C UCEC 132400719 + 132400699 132400739 41 TCGTTCAATTGGAGCAGCAGCTAAAAGCCAGGTAAAGTTTC TCGTTCAATTGGAGCAGCAGCTAAACGCCAGGTAAAGTTTC < 41bp 1 0.427401082611419 1 0.288387417793274 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132400719 chr5:132400724 nonsynonymous SNV 0.999 2 26 hm5C_associated_SNPs_44962 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132400683-132400729
64251 chr14 21462714 21462714 1 + C T UCEC 21462722 + 21462702 21462742 41 GTGGTTCAGAATCTGGGGAGCCTTATATTCCAGGTGTCTTT GTGGTTCAGAATTTGGGGAGCCTTATATTCCAGGTGTCTTT < 41bp 1 0.0727427132485525 1 0.0158212780952454 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL17 ENSG00000165792 CDS Human protein_coding chr14:21462722 chr14:21462714 nonsynonymous SNV 0.786 2 13 hm5C_associated_SNPs_44963 0 0 2 PPIG POSTAR2 ENCODE chr14:21462703-21462719
64251 chr9 106901525 106901525 1 + C A UCEC 106901519 + 106901499 106901539 41 CTACAGTAGCCAGATTTACTCAATGTCAAAATGGAAAGATT CTACAGTAGCCAGATTTACTCAATGTAAAAATGGAAAGATT < 41bp 1 0.324799266981623 1 0.818899154663086 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106901519 chr9:106901525 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_44964 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:106901511-106901532
64251 chr6 47580230 47580230 1 + A G UCEC 47580216 + 47580196 47580236 41 ACTTTGTTTTTAGGAAAGAACTGGAAAAACTGCGAAAAGAT ACTTTGTTTTTAGGAAAGAACTGGAAAAACTGCGGAAAGAT < 41bp 1 0.686353175742567 1 0.412574708461761 experiment 0.627293648514866 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47580216 chr6:47580230 synonymous SNV . 0 35 hm5C_associated_SNPs_44965 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47580214-47580269
64251 chr5 167943842 167943842 1 + A C UCEC 167943826 + 167943806 167943846 41 TGCTGCTCAGACATCCGTTGCGTATGGCTGCATCAAATATG TGCTGCTCAGACATCCGTTGCGTATGGCTGCATCAACTATG < 41bp 1 0.183129292660315 1 0.033019095659256 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167943826 chr5:167943842 nonsynonymous SNV 0.995 4 37 hm5C_associated_SNPs_44967 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:167943780-167943869
64251 chr10 102112203 102112203 1 + C T UCEC 102112188 + 102112168 102112208 41 CTCATCGTCTGTGGAGCCACCGCTCTTACAAAGCTCGGCTG CTCATCGTCTGTGGAGCCACCGCTCTTACAAAGCTTGGCTG < 41bp 1 0.326734287319093 1 0.573358297348022 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102112188 chr10:102112203 nonsynonymous SNV 0.037 3 36 hm5C_associated_SNPs_44968 0 0 19 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:102112174-102112237
64251 chr22 26880025 26880025 1 + T C UCEC 26880006 + 26879986 26880026 41 AGAGAGGCGGCGCCCCGGGGCCCCGAGGCGGAGTTCGAGTC AGAGAGGCGGCGCCCCGGGGCCCCGAGGCGGAGTTCGAGCC < 41bp 1 0.557833368194331 1 0.180821627378464 experiment 0.884333263611338 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SRRD ENSG00000100104 CDS Human protein_coding chr22:26880006 chr22:26880025 nonsynonymous SNV 0.668 0 40 hm5C_associated_SNPs_44969 0 0 1 DDX3X POSTAR2 ENCODE chr22:26879989-26880045
64251 chr4 148796254 148796254 1 + G T UCEC 148796249 + 148796229 148796269 41 AGACAGAATCCCAAGGACCACAAACGAGCAAGTCAGTTTAC AGACAGAATCCCAAGGACCACAAACTAGCAAGTCAGTTTAC < 41bp 1 0.240555320843519 1 0.303517162799835 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGAP10 ENSG00000071205 CDS Human protein_coding chr4:148796249 chr4:148796254 nonsynonymous SNV 0.997 2 26 hm5C_associated_SNPs_44970 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:148796223-148796257
64251 chr15 77224770 77224770 1 + G T UCEC 77224764 + 77224744 77224784 41 CAAAAAAGACTGCAGGCGATCATAAAGAAAATCGACTTGGA CAAAAAAGACTGCAGGCGATCATAAATAAAATCGACTTGGA < 41bp 1 0.618046960830372 1 0.252286672592163 experiment 0.763906078339256 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RCN2 ENSG00000117906 CDS Human protein_coding chr15:77224764 chr15:77224770 nonsynonymous SNV 0.998 1 27 hm5C_associated_SNPs_44972 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:77224704-77224802
64251 chr5 118484577 118484577 1 + C A UCEC 118484585 + 118484565 118484605 41 GGAAAAATTGATCTTGCATACATTTGGGAAGAATGGCCATT GGAAAAATTGATATTGCATACATTTGGGAAGAATGGCCATT < 41bp 1 0.0333661473827167 1 0.0391447842121124 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118484585 chr5:118484577 nonsynonymous SNV 0.013 0 13 hm5C_associated_SNPs_44973 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:118484567-118484588
64251 chr3 52233360 52233360 1 + A G UCEC 52233380 + 52233360 52233400 41 AAGATGATGGAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT GAGATGATGGAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT < 41bp 1 0.479157550188165 1 0.470909088850021 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233380 chr3:52233360 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_44974 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52233355-52233383
64251 chr1 9416618 9416618 1 + G A UCEC 9416605 + 9416585 9416625 41 TAGTGAGTGCCGTCTGGGGCCACTGTGAGATCCGAATGCGC TAGTGAGTGCCGTCTGGGGCCACTGTGAGATCCAAATGCGC < 41bp 1 0.209712270214966 1 0.134735524654388 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416605 chr1:9416618 nonsynonymous SNV 1.000 2 34 hm5C_associated_SNPs_44975 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9416603-9416630
64251 chr6 160494418 160494418 1 + A G UCEC 160494408 + 160494388 160494428 41 TTCGTGTGCAGGCCTGAGGCCAGGCCAACCAATAGGCCCAT TTCGTGTGCAGGCCTGAGGCCAGGCCAACCGATAGGCCCAT < 41bp 1 0.322356472869142 1 0.850769996643066 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGF2R ENSG00000197081 CDS Human protein_coding chr6:160494408 chr6:160494418 nonsynonymous SNV 0.701 0 31 hm5C_associated_SNPs_44976 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:160494416-160494454
64251 chr4 87968660 87968660 1 + C T UCEC 87968645 + 87968625 87968665 41 AATCCCCTGAACTGAAACCACTGCCGGAGGACTATCGACAG AATCCCCTGAACTGAAACCACTGCCGGAGGACTATTGACAG < 41bp 1 0.358364369154841 1 0.354528784751892 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AFF1 ENSG00000172493 CDS Human protein_coding chr4:87968645 chr4:87968660 stopgain 0.118 0 36 hm5C_associated_SNPs_44977 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:87968638-87968661
64251 chr6 13616699 13616699 1 + G T UCEC 13616704 + 13616684 13616724 41 CATTCCAAAAGAAAAGAAAACTCCTTCCAGACACTATTTTG CATTCCAAAAGAAAATAAAACTCCTTCCAGACACTATTTTG < 41bp 1 0.343524840625492 1 0.241240590810776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOL7 ENSG00000225921 CDS Human protein_coding chr6:13616704 chr6:13616699 nonsynonymous SNV 0.996 4 16 hm5C_associated_SNPs_44978 0 0 4 AGGF1 POSTAR2 ENCODE chr6:13616698-13616758
64251 chr16 56501900 56501900 1 + T C UCEC 56501910 + 56501890 56501930 41 TTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAG TTGAAGAAAGCTCTGAAATTCTCCTGAAGGAGTTTCTTAAG < 41bp 1 0.576673850569989 1 0.917631506919861 experiment 0.846652298860023 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56501910 chr16:56501900 synonymous SNV . 0 11 hm5C_associated_SNPs_44979 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:56501831-56501907
64251 chr2 201436940 201436940 1 + C A UCEC 201436921 + 201436901 201436941 41 AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATAATTTCT AGCTTAGAAAGAAAGTAAACCGGAAGACAGAAATAATTTAT < 41bp 1 0.726404275925745 1 0.532930135726929 experiment 0.547191448148509 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436921 chr2:201436940 nonsynonymous SNV 0.972 3 40 hm5C_associated_SNPs_44980 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201436902-201436953
64251 chr20 39741481 39741481 1 + G T UCEC 39741461 + 39741441 39741481 41 AATACGAGACTGCTCGGCGGCTGAAAAAATGTGTGGACAAG AATACGAGACTGCTCGGCGGCTGAAAAAATGTGTGGACAAT < 41bp 1 0.686787831518115 1 0.460848480463028 experiment 0.626424336963771 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741461 chr20:39741481 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_44981 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:39741463-39741493
64251 chr11 65827418 65827418 1 + G A UCEC 65827410 + 65827390 65827430 41 CAAACGGGGCATTGAGAAGCCCCCCTTCGAGCTGCCAGACT CAAACGGGGCATTGAGAAGCCCCCCTTCAAGCTGCCAGACT < 41bp 1 0.170132514294629 1 0.0500862002372742 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827410 chr11:65827418 nonsynonymous SNV 0.992 2 29 hm5C_associated_SNPs_44982 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:65827400-65827420
64251 chr5 54635878 54635878 1 + A C UCEC 54635889 + 54635869 54635909 41 CAGCGTGTAATATTTACCAGCCCAATTAAGGCTCTGAGTAA CAGCGTGTACTATTTACCAGCCCAATTAAGGCTCTGAGTAA < 41bp 1 0.376680492465229 1 0.351960837841034 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54635889 chr5:54635878 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_44983 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:54635866-54635989
64251 chr3 179462921 179462921 1 + G T UCEC 179462925 + 179462905 179462945 41 GCCAAGATACCATTTAGTGCCTGCCTTCAGGCCTTCTCTGA GCCAAGATACCATTTATTGCCTGCCTTCAGGCCTTCTCTGA < 41bp 1 0.472504255101443 1 0.0346703231334686 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP13 ENSG00000058056 CDS Human protein_coding chr3:179462925 chr3:179462921 nonsynonymous SNV 0.824 1 17 hm5C_associated_SNPs_44986 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:179462910-179462931
64251 chr20 39721205 39721205 1 + G T UCEC 39721195 + 39721175 39721215 41 ATTTGCCCCACCATATGAGCCTCTTCCAGAGAATGTCAAGT ATTTGCCCCACCATATGAGCCTCTTCCAGATAATGTCAAGT < 41bp 1 0.0719054169937073 1 0.0442748665809631 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TOP1 ENSG00000198900 CDS Human protein_coding chr20:39721195 chr20:39721205 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_44987 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39721149-39721224
64251 chr19 55899675 55899675 1 + G A UCEC 55899674 + 55899654 55899694 41 CTGTGATGGTGAAGAGGAAGCGGACCCGCCCCACCAAGAGC CTGTGATGGTGAAGAGGAAGCAGACCCGCCCCACCAAGAGC < 41bp 1 0.571592297883831 1 0.55489194393158 experiment 0.856815404232338 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899674 chr19:55899675 nonsynonymous SNV 0.901 1 22 hm5C_associated_SNPs_44988 0 0 39 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:55899600-55899700
64251 chr1 110561689 110561689 1 + T G UCEC 110561676 + 110561656 110561696 41 CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTGC CTCTCTTACCTTTCCAGGGTCGTCTACTCAATTGGAGCTGC < 41bp 1 0.133775334415224 1 0.0380018651485443 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110561676 chr1:110561689 nonsynonymous SNV 1.000 5 34 hm5C_associated_SNPs_44990 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:110561680-110561700
64251 chr2 29344289 29344289 1 + A G UCEC 29344282 + 29344262 29344302 41 TAGAGGACCTTCCAGATTTTCCATTAGAAGGAAATCCTTTG TAGAGGACCTTCCAGATTTTCCATTAGGAGGAAATCCTTTG < 41bp 1 0.0814796821496358 1 0.0441745519638062 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29344282 chr2:29344289 nonsynonymous SNV 0.992 3 28 hm5C_associated_SNPs_44991 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221658 chr2:29344280-29344300
64251 chr10 4877951 4877951 1 + G A UCEC 4877959 + 4877939 4877979 41 TTGCCTCTGGACGAGAGCAACATGGTTATTCCCAGTGACAC TTGCCTCTGGACAAGAGCAACATGGTTATTCCCAGTGACAC < 41bp 1 0.552264070577361 1 0.126085013151169 experiment 0.895471858845277 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKR1E2 ENSG00000165568 CDS Human protein_coding chr10:4877959 chr10:4877951 nonsynonymous SNV 0.002 0 13 hm5C_associated_SNPs_44993 0 0 1 DDX24 POSTAR2 ENCODE chr10:4877930-4878003
64251 chr6 64423377 64423377 1 + G A UCEC 64423358 + 64423338 64423378 41 AGCCAAGACAAGGACAGAGACAGAAAAAGCAGGGAGGAAGG AGCCAAGACAAGGACAGAGACAGAAAAAGCAGGGAGGAAAG < 41bp 1 0.784280933871465 1 0.523941278457642 experiment 0.431438132257069 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHF3 ENSG00000118482 CDS Human protein_coding chr6:64423358 chr6:64423377 nonsynonymous SNV 0.994 1 40 hm5C_associated_SNPs_44994 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:64423359-64423380
64251 chr16 89970564 89970564 1 + G A UCEC 89970558 + 89970538 89970578 41 TGCTCGAGTCTTGCAGTGTGCGGCCCGACGCCAGCGTTTCC TGCTCGAGTCTTGCAGTGTGCGGCCCAACGCCAGCGTTTCC < 41bp 1 0.448661555712674 1 0.374418824911118 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TCF25 ENSG00000141002 CDS Human protein_coding chr16:89970558 chr16:89970564 nonsynonymous SNV 0.018 4 27 hm5C_associated_SNPs_44995 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89970545-89970572
64251 chr5 73989527 73989527 1 + G A UCEC 73989526 + 73989506 73989546 41 ACAGAGTTTGGGGAGCATTACGAGGTAAGTTCCATGCAGTT ACAGAGTTTGGGGAGCATTACAAGGTAAGTTCCATGCAGTT < 41bp 1 0.633911514947067 1 0.838638603687286 experiment 0.732176970105867 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control HEXB ENSG00000049860 CDS Human protein_coding chr5:73989526 chr5:73989527 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_45000 0 0 4 GPKOW POSTAR2 ENCODE chr5:73989465-73989566
64251 chr16 30727510 30727510 1 + A G UCEC 30727523 + 30727503 30727543 41 TGACTTCATGGCACAGACCACGTAAGGGAGGAAGGAGGGTG TGACTTCGTGGCACAGACCACGTAAGGGAGGAAGGAGGGTG < 41bp 1 0.239952558858799 1 0.139658063650131 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SRCAP ENSG00000080603 CDS Human protein_coding chr16:30727523 chr16:30727510 nonsynonymous SNV 1.000 2 8 hm5C_associated_SNPs_45001 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30727390-30727512
64251 chr11 73075572 73075572 1 + C A UCEC 73075552 + 73075532 73075572 41 ACCTTGGGCACCCAGGGGAGCCCCATCACCAAGATGGTATC ACCTTGGGCACCCAGGGGAGCCCCATCACCAAGATGGTATA < 41bp 1 0.160416267551314 1 0.0451797544956207 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73075552 chr11:73075572 nonsynonymous SNV 0.999 1 41 hm5C_associated_SNPs_45003 0 0 6 CDC40 POSTAR2 ENCODE chr11:73075562-73075657
64251 chr15 91358383 91358383 1 + C A UCEC 91358367 + 91358347 91358387 41 TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTG TAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATAATTG < 41bp 1 0.610418465313931 1 0.0734100639820099 experiment 0.779163069372138 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91358367 chr15:91358383 synonymous SNV . 0 37 hm5C_associated_SNPs_45005 0 0 2 DDX55 POSTAR2 ENCODE chr15:91358331-91358447
64251 chr14 76455293 76455293 1 + G T UCEC 76455279 + 76455259 76455299 41 AGTCAGCGCAGGCCGAGAATCACCTCAATGGCAAGAATTCC AGTCAGCGCAGGCCGAGAATCACCTCAATGGCAATAATTCC < 41bp 1 0.556809776083397 1 0.133593499660492 experiment 0.886380447833207 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IFT43 ENSG00000119650 CDS Human protein_coding chr14:76455279 chr14:76455293 nonsynonymous SNV 0.994 1 35 hm5C_associated_SNPs_45006 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:76455275-76455305
64251 chr15 50789390 50789390 1 + C A UCEC 50789404 + 50789384 50789424 41 AGAAATCTGGAAGTTACCACCTGTGCTTTTAGTGCATCTGA AGAAATATGGAAGTTACCACCTGTGCTTTTAGTGCATCTGA < 41bp 1 0.34613480514281 1 0.317891657352448 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control USP8 ENSG00000138592 CDS Human protein_coding chr15:50789404 chr15:50789390 synonymous SNV . 0 7 hm5C_associated_SNPs_45007 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:50789378-50789414
64251 chr16 81654499 81654499 1 + C T UCEC 81654513 + 81654493 81654533 41 TACCTGCGAGACCAGTGGTTCCATTCTCTGCAATGGAAGGT TACCTGTGAGACCAGTGGTTCCATTCTCTGCAATGGAAGGT < 41bp 1 0.0148744096315347 1 0.0713131129741669 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CMIP ENSG00000153815 CDS Human protein_coding chr16:81654513 chr16:81654499 stopgain 0.997 1 7 hm5C_associated_SNPs_45009 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:81654488-81654522
64251 chr5 179151663 179151663 1 + G T UCEC 179151661 + 179151641 179151681 41 TTTGGGGAACATTTCAGAAACAGACCAGTGGTATGGAGTAT TTTGGGGAACATTTCAGAAACATACCAGTGGTATGGAGTAT < 41bp 1 0.0824494833728036 1 0.0570405721664429 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151661 chr5:179151663 nonsynonymous SNV 0.859 0 23 hm5C_associated_SNPs_45010 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr5 179151663 179151663 1 + G T UCEC 179151665 + 179151645 179151685 41 GGGAACATTTCAGAAACAGACCAGTGGTATGGAGTATAAGA GGGAACATTTCAGAAACATACCAGTGGTATGGAGTATAAGA < 41bp 1 0.227571293629297 1 0.0496888756752014 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179151665 chr5:179151663 nonsynonymous SNV 0.859 0 19 hm5C_associated_SNPs_45011 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:179151640-179151700
64251 chr2 114709357 114709357 1 + G T UCEC 114709370 + 114709350 114709390 41 GCAAAGAGATTTGAAAAGAACTGTAGATGCCCGGCTGAAAT GCAAAGATATTTGAAAAGAACTGTAGATGCCCGGCTGAAAT < 41bp 1 0.711562870470093 1 0.311671853065491 experiment 0.576874259059814 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114709370 chr2:114709357 nonsynonymous SNV 1.000 5 8 hm5C_associated_SNPs_45012 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr2:114709297-114709422
64251 chr11 61631196 61631196 1 + C T UCEC 61631203 + 61631183 61631223 41 CAGCCACCTGCAACGTGGAGCAGTCCTTCTTCAACGACTGG CAGCCACCTGCAATGTGGAGCAGTCCTTCTTCAACGACTGG < 41bp 1 0.0275353349781799 1 0.336595147848129 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61631203 chr11:61631196 synonymous SNV . 0 14 hm5C_associated_SNPs_45013 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61631192-61631224
64251 chr11 6631711 6631711 1 + C T UCEC 6631708 + 6631688 6631728 41 CGCAGGTGGCATTGGAAGGCCTTCGGCCTACCATCCCACCA CGCAGGTGGCATTGGAAGGCCTTTGGCCTACCATCCCACCA < 41bp 1 0.14992359041317 1 0.24207216501236 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6631708 chr11:6631711 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_45014 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:6631709-6631729
64251 chr2 207174854 207174854 1 + G T UCEC 207174847 + 207174827 207174867 41 TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGG TTTGATGATGACTGTGAGACCAAAAAATTTTCTTCGAAGGG < 41bp 1 0.43571775377514 1 0.185720443725586 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174847 chr2:207174854 nonsynonymous SNV 0.005 0 28 hm5C_associated_SNPs_45015 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174770-207174869
64251 chr5 82833372 82833372 1 + A C UCEC 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAACAGCCAAAACAGGGGCAGAATCAGT < 41bp 1 0.152248303591033 1 0.22636091709137 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833372 nonsynonymous SNV 0.000 1 26 hm5C_associated_SNPs_45016 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr4 103500147 103500147 1 + C G UCEC 103500160 + 103500140 103500180 41 CTGGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC CTGGCAGGTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC < 41bp 1 0.681574761970572 1 0.358169585466385 experiment 0.636850476058855 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103500160 chr4:103500147 nonsynonymous SNV 1.000 1 8 hm5C_associated_SNPs_45018 0 0 2 GRWD1 POSTAR2 ENCODE chr4:103500122-103500175
64251 chr19 30498484 30498484 1 + G T UCEC 30498487 + 30498467 30498507 41 ATTTGCTAGCTGATAAAGAACTGTGGGCTCGACTTGAAGAA ATTTGCTAGCTGATAAATAACTGTGGGCTCGACTTGAAGAA < 41bp 1 0.760479972437433 1 0.0776900053024292 experiment 0.479040055125134 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control URI1 ENSG00000105176 CDS Human protein_coding chr19:30498487 chr19:30498484 stopgain 0.959 1 18 hm5C_associated_SNPs_45019 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:30498478-30498502
64251 chr3 184038428 184038428 1 + G A UCEC 184038413 + 184038393 184038433 41 TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCGAGATC TCATCTTATAGCTTTCTTTCCCCAGATCCGAATTCAAGATC < 41bp 1 0.137330932952925 1 0.280240654945374 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184038413 chr3:184038428 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_45020 0 0 19 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:184038416-184038432
64251 chr6 33662782 33662782 1 - C T UCEC 33662799 - 33662779 33662819 41 AGCTTCATGGTGGAGTTGAGCTTGTCCTGGAGAATCCGAAT AGCTTCATGGTGGAGTTGAGCTTGTCCTGGAGAATCCAAAT < 41bp 1 0.258561425482551 1 0.0528092086315155 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33662799 chr6:33662782 nonsynonymous SNV 0.992 4 38 hm5C_associated_SNPs_45021 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33662772-33662799
64251 chr11 85977204 85977204 1 + G T UCEC 85977193 + 85977173 85977213 41 TCTCTTAAACTTTGGAGGATCAATTCAAAGAGAATGATGAA TCTCTTAAACTTTGGAGGATCAATTCAAAGATAATGATGAA < 41bp 1 0.170166720033489 1 0.165116459131241 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EED ENSG00000074266 CDS Human protein_coding chr11:85977193 chr11:85977204 nonsynonymous SNV 1.000 1 32 hm5C_associated_SNPs_45022 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:85977184-85977209
64251 chr14 75359624 75359624 1 + C T UCEC 75359614 + 75359594 75359634 41 AACCTACAGCAGCGGCAGTTCCTCCCCCTGCAGCACCCATA AACCTACAGCAGCGGCAGTTCCTCCCCCTGTAGCACCCATA < 41bp 1 0.104044110982863 1 0.237326741218567 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DLST ENSG00000119689 CDS Human protein_coding chr14:75359614 chr14:75359624 nonsynonymous SNV 0.654 0 31 hm5C_associated_SNPs_45027 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:75359614-75359643
64251 chr12 122618497 122618497 1 + C T UCEC 122618478 + 122618458 122618498 41 GCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCG GCAGCCCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCTG < 41bp 1 0.117640208208279 1 0.0618515312671661 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618478 chr12:122618497 synonymous SNV . 0 40 hm5C_associated_SNPs_45028 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:122618487-122618515
64251 chr12 122618497 122618497 1 + C T UCEC 122618483 + 122618463 122618503 41 CCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCCGTGTCC CCCACAAAATAGTGCCTGCTCCCAAACCAGAGCCTGTGTCC < 41bp 1 0.334011361658071 1 0.177632212638855 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618483 chr12:122618497 synonymous SNV . 0 35 hm5C_associated_SNPs_45029 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:122618487-122618515
64251 chr16 29994487 29994487 1 + G A UCEC 29994488 + 29994468 29994508 41 ATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGC ATCAGCGCCTCCAGCCAGAACAGCTCCGTCAACAGCCTAGC < 41bp 1 0.361296423993393 1 0.370896458625793 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994488 chr16:29994487 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_45030 0 0 3 GRWD1 POSTAR2 ENCODE chr16:29994456-29994500
64251 chr16 29994487 29994487 1 + G A UCEC 29994493 + 29994473 29994513 41 CGCCTCCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG CGCCTCCAGCCAGAACAGCTCCGTCAACAGCCTAGCAGATG < 41bp 1 0.0705609906654147 1 0.137208968400955 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29994493 chr16:29994487 nonsynonymous SNV 1.000 4 15 hm5C_associated_SNPs_45031 0 0 3 GRWD1 POSTAR2 ENCODE chr16:29994456-29994500
64251 chr15 22962524 22962524 1 + G A UCEC 22962534 + 22962514 22962554 41 GCTACGAGACGCTGCTGAAGCAGAGGCATGTGCAGGTGAGC GCTACGAGACACTGCTGAAGCAGAGGCATGTGCAGGTGAGC < 41bp 1 0.668777219909825 1 0.730197191238403 experiment 0.66244556018035 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22962534 chr15:22962524 synonymous SNV . 0 11 hm5C_associated_SNPs_45033 0 0 5 FMR1 POSTAR2 ENCODE chr15:22962477-22962549
64251 chr11 67378031 67378031 1 + C T UCEC 67378025 + 67378005 67378045 41 AAGCCCCGCCTGAAGCCCCCCTTCCCCGCAGACGTGGGTAA AAGCCCCGCCTGAAGCCCCCCTTCCCTGCAGACGTGGGTAA < 41bp 1 0.153054170188236 1 0.197046250104904 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378025 chr11:67378031 synonymous SNV . 0 27 hm5C_associated_SNPs_45036 0 0 3 DDX24 POSTAR2 ENCODE chr11:67377991-67378040
64251 chr2 135160648 135160648 1 + C T UCEC 135160666 + 135160646 135160686 41 TACGTGAAAAACCATGGTATCCTCAGTGGACGGGACCTGCA TATGTGAAAAACCATGGTATCCTCAGTGGACGGGACCTGCA < 41bp 1 0.221684658075637 1 0.097765326499939 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135160666 chr2:135160648 synonymous SNV . 0 3 hm5C_associated_SNPs_45038 0 0 1 GRWD1 POSTAR2 ENCODE chr2:135160571-135160691
64251 chr4 8608479 8608479 1 + G A UCEC 8608478 + 8608458 8608498 41 TTTCAGGGTGCCGGCTACAACGGGTGGACGAGCGGGAGGCA TTTCAGGGTGCCGGCTACAACAGGTGGACGAGCGGGAGGCA < 41bp 1 0.78027162262789 1 0.923004388809204 experiment 0.43945675474422 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control CPZ ENSG00000109625 CDS Human protein_coding chr4:8608478 chr4:8608479 nonsynonymous SNV 0.477 3 22 hm5C_associated_SNPs_45039 0 0 1 DDX24 POSTAR2 ENCODE chr4:8608462-8608521
64251 chr20 44038657 44038657 1 + C T UCEC 44038672 + 44038652 44038692 41 TCCTCCGACTCCTCCACCAACCTGCATAGCCCAAATCCAAG TCCTCTGACTCCTCCACCAACCTGCATAGCCCAAATCCAAG < 41bp 1 0.10866299644116 1 0.433663725852966 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44038672 chr20:44038657 synonymous SNV . 0 6 hm5C_associated_SNPs_45040 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:44038603-44038674
64251 chr13 24242897 24242897 1 + C T UCEC 24242887 + 24242867 24242907 41 CTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAG CTTCGGATCCCTCACGCAGTCCATCTGTGGTGAGTTTTCAG < 41bp 1 0.0938872079919256 1 0.112648338079453 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242887 chr13:24242897 synonymous SNV . 0 31 hm5C_associated_SNPs_45041 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr13:24242885-24242907
64251 chr19 49593560 49593560 1 + G A UCEC 49593563 + 49593543 49593583 41 CCCAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCTGAA CCCAGGACCCTCGAGATACCCCTCCTCCAACTCGTGCTGAA < 41bp 1 0.0903445810936937 1 0.114778012037277 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593563 chr19:49593560 nonsynonymous SNV 1.000 1 18 hm5C_associated_SNPs_45042 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr19 49593560 49593560 1 + G A UCEC 49593564 + 49593544 49593584 41 CCAGGACCCTCGAGATGCCCCTCCTCCAACTCGTGCTGAAA CCAGGACCCTCGAGATACCCCTCCTCCAACTCGTGCTGAAA < 41bp 1 0.229432457359906 1 0.636249601840973 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49593564 chr19:49593560 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_45043 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49593557-49593579
64251 chr12 49888752 49888752 1 + G A UCEC 49888749 + 49888729 49888769 41 ATGCCAGAGAATTGGAGGATCCCGAGTCTGCCATGCTAGAT ATGCCAGAGAATTGGAGGATCCCAAGTCTGCCATGCTAGAT < 41bp 1 0.468583194764554 1 0.127526491880417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888749 chr12:49888752 nonsynonymous SNV 0.478 3 24 hm5C_associated_SNPs_45044 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr12:49888737-49888765
64251 chr12 6969622 6969622 1 + G T UCEC 6969628 + 6969608 6969648 41 CAGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACAT CAGCAGGATGCCCATGAGTTCTTCCTTCACCTTATCAACAT < 41bp 1 0.220630090764477 1 0.0347322523593903 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control USP5 ENSG00000111667 CDS Human protein_coding chr12:6969628 chr12:6969622 nonsynonymous SNV 0.999 1 15 hm5C_associated_SNPs_45045 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:6969613-6969639
64251 chr6 31593349 31593349 1 + A C UCEC 31593332 + 31593312 31593352 41 GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCACCC GTCATGATCCCCGGGGTGGGCTACAGCCTTCAGGCCCCCCC < 41bp 1 0.676402899135295 1 0.536171674728394 experiment 0.647194201729411 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593332 chr6:31593349 synonymous SNV . 0 38 hm5C_associated_SNPs_45059 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593346 + 31593326 31593366 41 GGTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTA GGTGGGCTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTA < 41bp 1 0.263975483022393 1 0.0766705572605133 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593346 chr6:31593349 synonymous SNV . 0 24 hm5C_associated_SNPs_45060 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593347 + 31593327 31593367 41 GTGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTAC GTGGGCTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTAC < 41bp 1 0.18196160774888 1 0.128718197345734 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593347 chr6:31593349 synonymous SNV . 0 23 hm5C_associated_SNPs_45061 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593348 + 31593328 31593368 41 TGGGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACC TGGGCTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTACC < 41bp 1 0.170737012654117 1 0.0451984405517578 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593348 chr6:31593349 synonymous SNV . 0 22 hm5C_associated_SNPs_45062 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593350 + 31593330 31593370 41 GGCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGC GGCTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTACCGC < 41bp 1 0.554020791819314 1 0.310758143663406 experiment 0.891958416361371 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593350 chr6:31593349 synonymous SNV . 0 20 hm5C_associated_SNPs_45063 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTACCGCG < 41bp 1 0.374554868327644 1 0.142367631196976 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593349 synonymous SNV . 0 19 hm5C_associated_SNPs_45064 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTACCGCGG < 41bp 1 0.306788969077549 1 0.172214388847351 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593349 synonymous SNV . 0 18 hm5C_associated_SNPs_45065 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593349 31593349 1 + A C UCEC 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAGCCTTCAGGCCCCCCCCAGTTCCCTCCCTACCGCGGA < 41bp 1 0.289415212837811 1 0.400724470615387 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593349 synonymous SNV . 0 17 hm5C_associated_SNPs_45066 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr8 56699505 56699505 1 + G A UCEC 56699490 + 56699470 56699510 41 CCTGTACAAGTCATGATGGTCATCAACAGCTAAGTGAAGTT CCTGTACAAGTCATGATGGTCATCAACAGCTAAGTAAAGTT < 41bp 1 0.461165580418866 1 0.155355840921402 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699490 chr8:56699505 nonsynonymous SNV 0.011 0 36 hm5C_associated_SNPs_45067 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:56699500-56699520
64251 chrX 70517254 70517254 1 + G A UCEC 70517240 + 70517220 70517260 41 TTTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGAT TTTTTAGATTTGATGAGGCGCCAAGAAGAACTTCAGAGGAT < 41bp 1 0.144577879370992 1 0.30708035826683 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517240 chrX:70517254 nonsynonymous SNV 0.999 1 35 hm5C_associated_SNPs_45069 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517254 70517254 1 + G A UCEC 70517241 + 70517221 70517261 41 TTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGATG TTTTAGATTTGATGAGGCGCCAAGAAGAACTTCAGAGGATG < 41bp 1 0.685994936482136 1 0.367157727479935 experiment 0.628010127035728 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517241 chrX:70517254 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_45070 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517254 70517254 1 + G A UCEC 70517253 + 70517233 70517273 41 TGAGGCGCCAAGAAGAACTTCGGAGGATGGAAGAGCTGCAC TGAGGCGCCAAGAAGAACTTCAGAGGATGGAAGAGCTGCAC < 41bp 1 0.609475789595221 1 0.692869544029236 experiment 0.781048420809558 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517253 chrX:70517254 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_45071 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chr4 6862960 6862960 1 + G A UCEC 6862975 + 6862955 6862995 41 GATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAG GATTCACCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAG < 41bp 1 0.331579668540734 1 0.0880438387393951 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6862975 chr4:6862960 nonsynonymous SNV 0.999 3 6 hm5C_associated_SNPs_45072 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:6862960-6862973
64251 chr1 120269497 120269497 1 + C T UCEC 120269481 + 120269461 120269501 41 TCTATCCTTGCAGGCAGATTCCCCAGGCGACGGCTTCGATG TCTATCCTTGCAGGCAGATTCCCCAGGCGACGGCTTTGATG < 41bp 1 0.770384367627785 1 0.261338949203491 experiment 0.45923126474443 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PHGDH ENSG00000092621 CDS Human protein_coding chr1:120269481 chr1:120269497 nonsynonymous SNV 0.637 4 37 hm5C_associated_SNPs_45073 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:120269480-120269500
64251 chr2 136511733 136511733 1 + T C UCEC 136511732 + 136511712 136511752 41 TTCATTAAACTGTACAGATCCTGTAGTGTGTGTTCCATCCA TTCATTAAACTGTACAGATCCCGTAGTGTGTGTTCCATCCA < 41bp 1 0.368891757423427 1 0.0867962837219238 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136511732 chr2:136511733 synonymous SNV . 0 22 hm5C_associated_SNPs_45075 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:136511622-136511775
64251 chrX 41025267 41025267 1 + G A UCEC 41025277 + 41025257 41025297 41 GGATGAACCAGACTTAGATCCTGATATTAATAAGGACTTCT GGATGAACCAAACTTAGATCCTGATATTAATAAGGACTTCT < 41bp 1 0.0976730033707259 1 0.0627878308296204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:41025277 chrX:41025267 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_45076 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chrX:41025236-41025277
64251 chr9 96427989 96427989 1 + G A UCEC 96427976 + 96427956 96427996 41 CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCGACGAGCC CTTCTGCCCTAGCTCCAAGGCTCTCAGGCCCCCAACGAGCC < 41bp 1 0.126561599474381 1 0.083881676197052 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96427976 chr9:96427989 synonymous SNV . 0 34 hm5C_associated_SNPs_45078 0 0 1 AGGF1 POSTAR2 ENCODE chr9:96427969-96427995
64251 chr21 37785211 37785211 1 + C A UCEC 37785214 + 37785194 37785234 41 TGCCTTCCTGGCCATTTCTTCCACGGACGGTTACTGCTCAT TGCCTTCCTGGCCATTTATTCCACGGACGGTTACTGCTCAT < 41bp 1 0.458038788708057 1 0.292892843484879 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785214 chr21:37785211 nonsynonymous SNV 1.000 4 18 hm5C_associated_SNPs_45079 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr21:37785195-37785218
64251 chr20 1144997 1144997 1 + G A UCEC 1145015 + 1144995 1145035 41 GAGATCTGGCTTCCCAAGAGCACTTATTGACCCTTCCTCAG GAAATCTGGCTTCCCAAGAGCACTTATTGACCCTTCCTCAG < 41bp 1 0.332510320733439 1 0.0189460813999176 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1145015 chr20:1144997 nonsynonymous SNV 1.000 3 3 hm5C_associated_SNPs_45080 0 0 13 CPSF3 POSTAR2 GSE37401,GSM917668 chr20:1144974-1144999
64251 chr4 123145707 123145707 1 + C T UCEC 123145724 + 123145704 123145744 41 GGTCTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG GGTTTCCAGCTGAGAGCACACGCTATGTTCTCAGCAGAAGG < 41bp 1 0.422489790425469 1 0.212111860513687 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KIAA1109 ENSG00000138688 CDS Human protein_coding chr4:123145724 chr4:123145707 nonsynonymous SNV 1.000 2 4 hm5C_associated_SNPs_45082 0 0 1 EIF3H POSTAR2 ENCODE chr4:123145692-123145743
64251 chrX 123229241 123229241 1 + G A UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAACAGACAAGAGAGAACAGAACTGAAGCCTGATTTCT < 41bp 1 0.405748877180851 1 0.423438400030136 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229241 nonsynonymous SNV 0.998 3 12 hm5C_associated_SNPs_45084 0 0 11 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chr22 47290704 47290704 1 + A C UCEC 47290696 + 47290676 47290716 41 CCAGATCCACATAGACATCCCTCGCATGAGCCCTGAAGCGT CCAGATCCACATAGACATCCCTCGCATGCGCCCTGAAGCGT < 41bp 1 0.292345912194838 1 0.0834000110626221 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47290696 chr22:47290704 nonsynonymous SNV 0.978 3 29 hm5C_associated_SNPs_45085 0 0 4 GRWD1 POSTAR2 ENCODE chr22:47290686-47290742
64251 chr1 200730050 200730050 1 + C A UCEC 200730036 + 200730016 200730056 41 CCAGGAACACATCAAACCACCTGTTGTTAATTTGCTTCTAT CCAGGAACACATCAAACCACCTGTTGTTAATTTGATTCTAT < 41bp 1 0.162278872189752 1 0.0546545386314392 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CAMSAP2 ENSG00000118200 CDS Human protein_coding chr1:200730036 chr1:200730050 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45086 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:200730041-200730059
64251 chr11 61632663 61632663 1 + C T UCEC 61632668 + 61632648 61632688 41 CAACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTG CAACTTACACAAGATTGCCCCGCTGGTGAAGTCTCTATGTG < 41bp 1 0.370394160201705 1 0.147710055112839 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632668 chr11:61632663 synonymous SNV . 0 16 hm5C_associated_SNPs_45087 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:61632653-61632691
64251 chr11 61632663 61632663 1 + C T UCEC 61632670 + 61632650 61632690 41 ACTTACACAAGATCGCCCCGCTGGTGAAGTCTCTATGTGCC ACTTACACAAGATTGCCCCGCTGGTGAAGTCTCTATGTGCC < 41bp 1 0.530307877028594 1 0.353135406970978 experiment 0.939384245942811 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FADS2 ENSG00000134824 CDS Human protein_coding chr11:61632670 chr11:61632663 synonymous SNV . 0 14 hm5C_associated_SNPs_45088 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:61632653-61632691
64251 chr4 166254697 166254697 1 + G T UCEC 166254694 + 166254674 166254714 41 CATGGGGATCCCTTATAGTTCATGAAGCCCTTTATTTCTTA CATGGGGATCCCTTATAGTTCATTAAGCCCTTTATTTCTTA < 41bp 1 0.264232690810834 1 0.0160024166107178 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166254694 chr4:166254697 stopgain 0.948 1 24 hm5C_associated_SNPs_45090 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:166254666-166254697
64251 chr1 145115796 145115796 1 + G T UCEC 145115809 + 145115789 145115829 41 ATGCGAAGTACTTGAACATGCATTCCACTTATGCCAAACTT ATGCGAATTACTTGAACATGCATTCCACTTATGCCAAACTT < 41bp 1 0.0417880528356591 1 0.0492966175079346 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SEC22B ENSG00000223380 ncRNA_exonic Human other chr1:145115809 chr1:145115796 . . 0 8 hm5C_associated_SNPs_45091 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:145115755-145115805
64251 chr12 101711341 101711341 1 + G A UCEC 101711330 + 101711310 101711350 41 AAAAGGCAAAGGGATGGTGGCAGAGGAAATCGAAGAGGAAC AAAAGGCAAAGGGATGGTGGCAGAGGAAATCAAAGAGGAAC < 41bp 1 0.38010035792482 1 0.531568288803101 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711330 chr12:101711341 nonsynonymous SNV 0.017 1 32 hm5C_associated_SNPs_45092 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711341 101711341 1 + G A UCEC 101711340 + 101711320 101711360 41 GGGATGGTGGCAGAGGAAATCGAAGAGGAACCTGCCGCAGG GGGATGGTGGCAGAGGAAATCAAAGAGGAACCTGCCGCAGG < 41bp 1 0.666944755213569 1 0.871371984481812 experiment 0.666110489572862 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711340 chr12:101711341 nonsynonymous SNV 0.017 1 22 hm5C_associated_SNPs_45093 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711341 101711341 1 + G A UCEC 101711351 + 101711331 101711371 41 AGAGGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAG AGAGGAAATCAAAGAGGAACCTGCCGCAGGAGATGATGAAG < 41bp 1 0.334818380583487 1 0.539670288562775 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711351 chr12:101711341 nonsynonymous SNV 0.017 1 11 hm5C_associated_SNPs_45094 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711341 101711341 1 + G A UCEC 101711354 + 101711334 101711374 41 GGAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGT GGAAATCAAAGAGGAACCTGCCGCAGGAGATGATGAAGAGT < 41bp 1 0.270881894186231 1 0.43636691570282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711354 chr12:101711341 nonsynonymous SNV 0.017 1 8 hm5C_associated_SNPs_45095 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711341 101711341 1 + G A UCEC 101711355 + 101711335 101711375 41 GAAATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTT GAAATCAAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTT < 41bp 1 0.431374807344548 1 0.626878619194031 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711355 chr12:101711341 nonsynonymous SNV 0.017 1 7 hm5C_associated_SNPs_45096 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr12 101711341 101711341 1 + G A UCEC 101711357 + 101711337 101711377 41 AATCGAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTTGG AATCAAAGAGGAACCTGCCGCAGGAGATGATGAAGAGTTGG < 41bp 1 0.744732200853634 1 0.853346705436707 experiment 0.510535598292731 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711357 chr12:101711341 nonsynonymous SNV 0.017 1 5 hm5C_associated_SNPs_45097 0 0 4 FMR1 POSTAR2 ENCODE chr12:101711314-101711378
64251 chr9 35733119 35733119 1 + G T UCEC 35733112 + 35733092 35733132 41 CATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTAT CATGACCACACCTACTCCCTCCCACGGTAAACTGTCTCTAT < 41bp 1 0.110849678339061 1 0.0433460175991058 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733112 chr9:35733119 stopgain 0.017 0 28 hm5C_associated_SNPs_45098 0 0 2 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr9 35733119 35733119 1 + G T UCEC 35733113 + 35733093 35733133 41 ATGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATG ATGACCACACCTACTCCCTCCCACGGTAAACTGTCTCTATG < 41bp 1 0.167956723160918 1 0.102048993110657 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733113 chr9:35733119 stopgain 0.017 0 27 hm5C_associated_SNPs_45099 0 0 2 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr10 17277195 17277195 1 + G T UCEC 17277176 + 17277156 17277196 41 CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTGA CACCCCCTGCAGAATGAGTCCCTGGAACGCCAGATGCGTTA < 41bp 1 0.14534016135476 1 0.108674198389053 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277176 chr10:17277195 stopgain 1.000 1 40 hm5C_associated_SNPs_45101 0 0 38 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277195 17277195 1 + G T UCEC 17277185 + 17277165 17277205 41 CAGAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGA CAGAATGAGTCCCTGGAACGCCAGATGCGTTAAATGGAAGA < 41bp 1 0.382108708994862 1 0.69793301820755 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277185 chr10:17277195 stopgain 1.000 1 31 hm5C_associated_SNPs_45102 0 0 38 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr10 17277195 17277195 1 + G T UCEC 17277192 + 17277172 17277212 41 AGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTT AGTCCCTGGAACGCCAGATGCGTTAAATGGAAGAGAACTTT < 41bp 1 0.247215018222107 1 0.208135426044464 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17277192 chr10:17277195 stopgain 1.000 1 24 hm5C_associated_SNPs_45103 0 0 38 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:17277180-17277220
64251 chr6 34212861 34212861 1 + T C UCEC 34212877 + 34212857 34212897 41 TGAGTGGGGAGCAGTTTTCCCCTGGCCTCAGTTCCCAGCTC TGAGCGGGGAGCAGTTTTCCCCTGGCCTCAGTTCCCAGCTC < 41bp 1 0.691970977223095 1 0.708561599254608 experiment 0.616058045553811 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34212877 chr6:34212861 synonymous SNV . 0 5 hm5C_associated_SNPs_45104 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34212824-34212887
64251 chrX 129185902 129185902 1 + C T UCEC 129185891 + 129185871 129185911 41 ATCCTCCTGGGAGCTCAGATCAAGAAGGAGACGATCCGATG ATCCTCCTGGGAGCTCAGATCAAGAAGGAGATGATCCGATG < 41bp 1 0.748595306332944 1 0.870839655399323 experiment 0.502809387334111 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185891 chrX:129185902 synonymous SNV . 0 32 hm5C_associated_SNPs_45105 0 0 1 DDX24 POSTAR2 ENCODE chrX:129185902-129185992
64251 chr7 36464165 36464165 1 + C T UCEC 36464155 + 36464135 36464175 41 TAATGCTTTATTTTTCCAGGCAAGATGTATCCAATGACTTT TAATGCTTTATTTTTCCAGGCAAGATGTATTCAATGACTTT < 41bp 1 0.321418878865719 1 0.324450790882111 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36464155 chr7:36464165 nonsynonymous SNV 0.997 3 31 hm5C_associated_SNPs_45106 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:36464150-36464175
64251 chr9 100773653 100773653 1 + C T UCEC 100773650 + 100773630 100773670 41 GATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGA GATGTAGAAGGGGATGAGGACGATGATGAAGTCAGTGAGGA < 41bp 1 0.494322722106293 1 0.470453381538391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773650 chr9:100773653 synonymous SNV . 0 24 hm5C_associated_SNPs_45108 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chr9 100773653 100773653 1 + C T UCEC 100773662 + 100773642 100773682 41 GATGAGGACGACGATGAAGTCAGTGAGGAGGTCAGTGCAGC GATGAGGACGATGATGAAGTCAGTGAGGAGGTCAGTGCAGC < 41bp 1 0.629578325719154 1 0.41373798251152 experiment 0.740843348561692 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773662 chr9:100773653 synonymous SNV . 0 12 hm5C_associated_SNPs_45109 0 0 49 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773550-100773670
64251 chrX 150156314 150156314 1 + G A UCEC 150156311 + 150156291 150156331 41 AAAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGG AAAGGGTCCTGCTAAAGTTGCCCAGAAAAAGGTGGAAGAGG < 41bp 1 0.260235474288555 1 0.114947736263275 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156311 chrX:150156314 nonsynonymous SNV 0.969 1 24 hm5C_associated_SNPs_45111 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156314 150156314 1 + G A UCEC 150156312 + 150156292 150156332 41 AAGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGA AAGGGTCCTGCTAAAGTTGCCCAGAAAAAGGTGGAAGAGGA < 41bp 1 0.532231260596023 1 0.424913257360458 experiment 0.935537478807954 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156312 chrX:150156314 nonsynonymous SNV 0.969 1 23 hm5C_associated_SNPs_45112 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 150156314 150156314 1 + G A UCEC 150156313 + 150156293 150156333 41 AGGGTCCTGCTAAAGTTGCCCGGAAAAAGGTGGAAGAGGAA AGGGTCCTGCTAAAGTTGCCCAGAAAAAGGTGGAAGAGGAA < 41bp 1 0.633665540186171 1 0.561741173267365 experiment 0.732668919627658 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150156313 chrX:150156314 nonsynonymous SNV 0.969 1 22 hm5C_associated_SNPs_45113 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chrX:150156275-150156330
64251 chrX 152959698 152959698 1 + C A UCEC 152959707 + 152959687 152959727 41 CTCTGCTTTGTCATCGATCTCTCCATGGTGACTGATGTGAG CTCTGCTTTGTAATCGATCTCTCCATGGTGACTGATGTGAG < 41bp 1 0.742337380096665 1 0.947188556194305 experiment 0.515325239806669 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959707 chrX:152959698 synonymous SNV . 0 12 hm5C_associated_SNPs_45114 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chrX 152959698 152959698 1 + C A UCEC 152959718 + 152959698 152959738 41 CATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG AATCGATCTCTCCATGGTGACTGATGTGAGTGGGGTGGGGG < 41bp 1 0.338382523163474 1 0.118282735347748 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SLC6A8 ENSG00000130821 CDS Human protein_coding chrX:152959718 chrX:152959698 synonymous SNV . 0 1 hm5C_associated_SNPs_45115 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152959679-152959720
64251 chr17 57287553 57287553 1 + C A UCEC 57287568 + 57287548 57287588 41 GAGATCTGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACG GAGATATGCGTTGTGGGAATCTTCGGCAAGACGGCTCTACG < 41bp 1 0.518029152137763 1 0.659614861011505 experiment 0.963941695724474 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287568 chr17:57287553 synonymous SNV . 0 6 hm5C_associated_SNPs_45116 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:57287535-57287557
64251 chr10 128768989 128768989 1 + G T UCEC 128768993 + 128768973 128769013 41 TAACTATGATGCCAGAGGAGCGGATGAACTTTCTTTACAGA TAACTATGATGCCAGATGAGCGGATGAACTTTCTTTACAGA < 41bp 1 0.0943466670659946 1 0.43416365981102 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOCK1 ENSG00000150760 CDS Human protein_coding chr10:128768993 chr10:128768989 stopgain 0.984 1 17 hm5C_associated_SNPs_45118 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:128768977-128769010
64251 chr1 151020407 151020407 1 + G T UCEC 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCATACTC < 41bp 1 0.62293919294716 1 0.469291627407074 experiment 0.75412161410568 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020407 nonsynonymous SNV 0.001 0 37 hm5C_associated_SNPs_45119 0 0 1 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr1 151020407 151020407 1 + G T UCEC 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCATACTCC < 41bp 1 0.494844378519914 1 0.675429940223694 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020407 nonsynonymous SNV 0.001 0 36 hm5C_associated_SNPs_45120 0 0 1 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chrX 107834435 107834435 1 + G A UCEC 107834422 + 107834402 107834442 41 AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGGCCCTGCT AGCCTGGGGCTCCTGGGCTTCCAGGGCCTCCTGACCCTGCT < 41bp 1 0.601008755669592 1 0.898171782493591 experiment 0.797982488660815 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107834422 chrX:107834435 nonsynonymous SNV 0.976 4 34 hm5C_associated_SNPs_45122 0 0 2 PPIG POSTAR2 ENCODE chrX:107834381-107834439
64251 chr3 33877683 33877683 1 + G T UCEC 33877665 + 33877645 33877685 41 ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAAGAT ATGACTTCATTTATCATGATCGAGTTCCAGACCTTAAATAT < 41bp 1 0.442889411472347 1 0.292905628681183 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877665 chr3:33877683 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_45124 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33877640-33877700
64251 chr17 38609285 38609285 1 + C T UCEC 38609301 + 38609281 38609321 41 AGCGCCCATGACCGCAGGTGCCTGCAGAAGCACTTCGCCAA AGCGTCCATGACCGCAGGTGCCTGCAGAAGCACTTCGCCAA < 41bp 1 0.106701824762589 1 0.0854181051254272 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38609301 chr17:38609285 nonsynonymous SNV 0.961 0 5 hm5C_associated_SNPs_45125 0 0 1 SND1 POSTAR2 ENCODE chr17:38609238-38609349
64251 chrX 56592088 56592088 1 + C A UCEC 56592076 + 56592056 56592096 41 CAACAACTGGAACAGCTCAACGCAATGGGGTTCTTAAACCG CAACAACTGGAACAGCTCAACGCAATGGGGTTATTAAACCG < 41bp 1 0.759465735556675 1 0.751291036605835 experiment 0.481068528886651 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592076 chrX:56592088 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_45126 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:56592070-56592096
64251 chr1 156761569 156761569 1 + C A UCEC 156761563 + 156761543 156761583 41 CAGGAAATTGCCCCAGATGCCTCCTTCATCGATGACGAAGC CAGGAAATTGCCCCAGATGCCTCCTTAATCGATGACGAAGC < 41bp 1 0.527102087301178 1 0.208423048257828 experiment 0.945795825397644 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156761563 chr1:156761569 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_45127 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:156761546-156761573
64251 chr17 78082367 78082367 1 + C T UCEC 78082382 + 78082362 78082402 41 ACCCGCCAGGTGGTGGAGAACATGACCAGGGCCCACTTCCC ACCCGTCAGGTGGTGGAGAACATGACCAGGGCCCACTTCCC < 41bp 1 0.784118475637144 1 0.12018895149231 experiment 0.431763048725712 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78082382 chr17:78082367 synonymous SNV . 0 6 hm5C_associated_SNPs_45128 0 0 1 RPS3 POSTAR2 ENCODE chr17:78082311-78082379
64251 chr18 48446853 48446853 1 + C T UCEC 48446838 + 48446818 48446858 41 GTTTTTAGATATGGCCGGAACACACTCATTCAGTTCGAAGA GTTTTTAGATATGGCCGGAACACACTCATTCAGTTTGAAGA < 41bp 1 0.21413220524939 1 0.129078924655914 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ME2 ENSG00000082212 CDS Human protein_coding chr18:48446838 chr18:48446853 synonymous SNV . 0 36 hm5C_associated_SNPs_45129 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr18:48446825-48446855
64251 chr2 86360545 86360545 1 + C A UCEC 86360529 + 86360509 86360549 41 AAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCCTAAA AAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCATAAA < 41bp 1 0.522396516959228 1 0.699435174465179 experiment 0.955206966081543 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86360529 chr2:86360545 nonsynonymous SNV 0.959 4 37 hm5C_associated_SNPs_45130 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:86360523-86360554
64251 chr1 44878336 44878336 1 + C T UCEC 44878350 + 44878330 44878370 41 TGCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTA TGCTGTTTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTA < 41bp 1 0.456442324006191 1 0.462544798851013 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878350 chr1:44878336 synonymous SNV . 0 7 hm5C_associated_SNPs_45131 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:44878320-44878340
64251 chr1 162536047 162536047 1 + G T UCEC 162536030 + 162536010 162536050 41 AGGCCATTGAAGGTTTTAACCAGTCTTCTCACCAAAAGAAT AGGCCATTGAAGGTTTTAACCAGTCTTCTCACCAAAATAAT < 41bp 1 0.346168744825191 1 0.243906199932098 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control UAP1 ENSG00000117143 CDS Human protein_coding chr1:162536030 chr1:162536047 nonsynonymous SNV 0.992 1 38 hm5C_associated_SNPs_45132 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162536006-162536062
64251 chr11 94533464 94533464 1 + T C UCEC 94533474 + 94533454 94533494 41 ACCCCCTGAGTATGGGGTAACGAGGTGATTATCAACTGCAG ACCCCCTGAGCATGGGGTAACGAGGTGATTATCAACTGCAG < 41bp 1 0.666180019198165 1 0.744880199432373 experiment 0.66763996160367 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AMOTL1 ENSG00000166025 CDS Human protein_coding chr11:94533474 chr11:94533464 nonsynonymous SNV 0.939 3 11 hm5C_associated_SNPs_45134 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:94533464-94533493
64251 chr11 17393602 17393602 1 + A C UCEC 17393604 + 17393584 17393624 41 CTCTCAAGTGCATTCTGAAACACTGGAACTCCTTTGACACT CTCTCAAGTGCATTCTGACACACTGGAACTCCTTTGACACT < 41bp 1 0.291377888615493 1 0.0541815757751465 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393604 chr11:17393602 nonsynonymous SNV 0.741 1 19 hm5C_associated_SNPs_45135 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr11:17393559-17393633
64251 chr5 82833362 82833362 1 + A G UCEC 82833367 + 82833347 82833387 41 GAATTTGAAAGTGGAACAGCCAAAAAAGGGGCAGAATCAGT GAATTTGAAAGTGGAGCAGCCAAAAAAGGGGCAGAATCAGT < 41bp 1 0.180876219919207 1 0.281611323356628 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82833367 chr5:82833362 nonsynonymous SNV 0.002 0 16 hm5C_associated_SNPs_45136 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82833340-82833428
64251 chr1 27631567 27631567 1 + C T UCEC 27631562 + 27631542 27631582 41 GGGAAAAGGAGACCACCAACCTGGTCCGTGTGCTCCAAGGG GGGAAAAGGAGACCACCAACCTGGTTCGTGTGCTCCAAGGG < 41bp 1 0.713678730205066 1 0.731958270072937 experiment 0.572642539589869 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDTC1 ENSG00000142784 CDS Human protein_coding chr1:27631562 chr1:27631567 nonsynonymous SNV . 0 26 hm5C_associated_SNPs_45138 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr1:27631560-27631580
64251 chr9 35389882 35389882 1 + C T UCEC 35389874 + 35389854 35389894 41 ACCTCCAGAGGAACAAGGGCCCAGCATTCGGAACCTGGATT ACCTCCAGAGGAACAAGGGCCCAGCATTTGGAACCTGGATT < 41bp 1 0.0708260395625366 1 0.172866702079773 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UNC13B ENSG00000198722 CDS Human protein_coding chr9:35389874 chr9:35389882 nonsynonymous SNV 1.000 4 29 hm5C_associated_SNPs_45139 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:35389867-35389893
64251 chr17 28499611 28499611 1 + A C UCEC 28499607 + 28499587 28499627 41 GAAGCTGCTAAGAAGCAGGCCATGAAACAGGTAAGGTAGAA GAAGCTGCTAAGAAGCAGGCCATGCAACAGGTAAGGTAGAA < 41bp 1 0.334381050485421 1 0.0683208405971527 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28499607 chr17:28499611 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_45141 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:28499610-28499632
64251 chr10 104157768 104157768 1 + C A UCEC 104157753 + 104157733 104157773 41 CATAGAATCTCCGGGGGCATCAAACCTGAAGATTTCTCGAA CATAGAATCTCCGGGGGCATCAAACCTGAAGATTTATCGAA < 41bp 1 0.206365211351622 1 0.438122481107712 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104157753 chr10:104157768 nonsynonymous SNV 0.894 4 36 hm5C_associated_SNPs_45143 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:104157752-104157771
64251 chr19 49611699 49611699 1 + G T UCEC 49611707 + 49611687 49611727 41 CTGCGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGT CTGCGCCGGAGTTAAGAGGTCGTCCTCTCCATCTGCTGTGT < 41bp 1 0.137108801151835 1 0.0372253954410553 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611707 chr19:49611699 stoploss 0.627 0 13 hm5C_associated_SNPs_45144 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr19 49611699 49611699 1 + G T UCEC 49611710 + 49611690 49611730 41 CGCCGGAGTGAAGAGGTCGTCCTCTCCATCTGCTGTGTTTG CGCCGGAGTTAAGAGGTCGTCCTCTCCATCTGCTGTGTTTG < 41bp 1 0.04993345602024 1 0.0359221994876862 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SNRNP70 ENSG00000104852 CDS Human protein_coding chr19:49611710 chr19:49611699 stoploss 0.627 0 10 hm5C_associated_SNPs_45145 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr19:49611620-49611754
64251 chr16 85840457 85840457 1 + G A UCEC 85840456 + 85840436 85840476 41 TTAGCCTCCAAGTGGGACTACGAAAAGAACGAGTGGAAGAA TTAGCCTCCAAGTGGGACTACAAAAAGAACGAGTGGAAGAA < 41bp 1 0.773036134209196 1 0.361003577709198 experiment 0.453927731581608 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840456 chr16:85840457 nonsynonymous SNV 0.945 1 22 hm5C_associated_SNPs_45147 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:85840392-85840486
64251 chrX 123229236 123229236 1 + C T UCEC 123229250 + 123229230 123229270 41 AAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT AAAGAATAGACGAGAGAGAACAGAACTGAAGCCTGATTTCT < 41bp 1 0.45243727507696 1 0.459439784288406 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STAG2 ENSG00000101972 CDS Human protein_coding chrX:123229250 chrX:123229236 synonymous SNV . 0 7 hm5C_associated_SNPs_45148 0 0 10 DGCR8 POSTAR2 GSE39086,GSM955513 chrX:123229220-123229260
64251 chr15 41192187 41192187 1 + G A UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCACATGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA < 41bp 1 0.36569982306505 1 0.454179346561432 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192187 nonsynonymous SNV 0.986 3 7 hm5C_associated_SNPs_45149 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr15 41192187 41192187 1 + G A UCEC 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCACATGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT < 41bp 1 0.77594451655093 1 0.846785664558411 experiment 0.44811096689814 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192187 nonsynonymous SNV 0.986 3 6 hm5C_associated_SNPs_45150 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr19 36128132 36128132 1 + G A UCEC 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT GCCTTCAGCCACTTCCCATCCTTCCTTAAGGCCAAGGTGAT < 41bp 1 0.165758593523539 1 0.515446662902832 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128132 nonsynonymous SNV 1.000 2 11 hm5C_associated_SNPs_45152 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36128087-36128139
64251 chrX 73044055 73044055 1 - A G UCEC 73044044 - 73044024 73044064 41 GTTATCTATTGTGTGCCAATCTCATTGCTAGGCATTGGGGA GTTATCTATCGTGTGCCAATCTCATTGCTAGGCATTGGGGA < 41bp 1 0.105244983172896 1 0.193599224090576 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044044 chrX:73044055 . . 0 10 hm5C_associated_SNPs_45153 0 0 37 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044055 73044055 1 - A G UCEC 73044072 - 73044052 73044092 41 TGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATTGTG TGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATCGTG < 41bp 1 0.117420220471024 1 0.0741501748561859 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044072 chrX:73044055 . . 0 38 hm5C_associated_SNPs_45154 0 0 37 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044055 73044055 1 - A G UCEC 73044074 - 73044054 73044094 41 ATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATTG ATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATCG < 41bp 1 0.263214542591734 1 0.197937965393066 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044074 chrX:73044055 . . 0 40 hm5C_associated_SNPs_45155 0 0 37 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044055 73044055 1 - A G UCEC 73044075 - 73044055 73044095 41 GATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATT GATTGGTTGTCTGAAGAATGCCACTATAGTAGTTATCTATC < 41bp 1 0.0717803136731025 1 0.0313075482845306 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044075 chrX:73044055 . . 0 41 hm5C_associated_SNPs_45156 0 0 37 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr12 53663743 53663743 1 + C T UCEC 53663747 + 53663727 53663767 41 GGGCATTGTATGAGAGCTGCCAGTTCTTCCTTTCAGGCCTG GGGCATTGTATGAGAGTTGCCAGTTCTTCCTTTCAGGCCTG < 41bp 1 0.236750101727836 1 0.391987860202789 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663747 chr12:53663743 synonymous SNV . 0 17 hm5C_associated_SNPs_45157 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:53663720-53663760
64251 chr9 140137223 140137223 1 + G A UCEC 140137216 + 140137196 140137236 41 TCAGACACAGTGGTGGAGCCCTACAACGCCACCCTCTCAGT TCAGACACAGTGGTGGAGCCCTACAACACCACCCTCTCAGT < 41bp 1 0.720446804770234 1 0.515686988830566 experiment 0.559106390459533 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137216 chr9:140137223 nonsynonymous SNV 0.984 0 28 hm5C_associated_SNPs_45158 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:140137160-140137240
64251 chr7 148921517 148921517 1 + C A UCEC 148921521 + 148921501 148921541 41 AGCGGCTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTG AGCGGCTGCACACGGGAGAGCGGCCTTTCCAATGTGCACTG < 41bp 1 0.483384036420861 1 0.654489636421204 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921521 chr7:148921517 synonymous SNV . 0 17 hm5C_associated_SNPs_45160 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148921508-148921536
64251 chr12 132237681 132237681 1 + C T UCEC 132237672 + 132237652 132237692 41 CAATGTGTCTCCACAGCGACCGTGGCAGCCATGTATTACAG CAATGTGTCTCCACAGCGACCGTGGCAGCTATGTATTACAG < 41bp 1 0.35556011764302 1 0.324491739273071 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132237672 chr12:132237681 synonymous SNV . 0 30 hm5C_associated_SNPs_45161 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:132237680-132237700
64251 chr5 72189510 72189510 1 + A G UCEC 72189491 + 72189471 72189511 41 CTTTTGCCCTGTTAGGTGACCTCACAAAAGCTTGCTTTCAG CTTTTGCCCTGTTAGGTGACCTCACAAAAGCTTGCTTTCGG < 41bp 1 0.215904657449118 1 0.113589257001877 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control TNPO1 ENSG00000083312 CDS Human protein_coding chr5:72189491 chr5:72189510 nonsynonymous SNV 0.999 1 40 hm5C_associated_SNPs_45162 0 0 2 PRPF8 POSTAR2 ENCODE chr5:72189508-72189560
64251 chr7 30661074 30661074 1 + C A UCEC 30661058 + 30661038 30661078 41 TCGTTCCTGTTATGACCTCTCCTGTCATGCACGAGCCACCA TCGTTCCTGTTATGACCTCTCCTGTCATGCACGAGCAACCA < 41bp 1 0.210353806485576 1 0.0916042625904083 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GARS ENSG00000106105 CDS Human protein_coding chr7:30661058 chr7:30661074 synonymous SNV . 0 37 hm5C_associated_SNPs_45163 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30661072-30661098
64251 chr2 113260567 113260567 1 + T G UCEC 113260557 + 113260537 113260577 41 GGGTGTGCTTCGGACTGCTTCAGAACCATATCATGTTGATA GGGTGTGCTTCGGACTGCTTCAGAACCATAGCATGTTGATA < 41bp 1 0.524367120529687 1 0.521205544471741 experiment 0.951265758940626 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113260557 chr2:113260567 stopgain 0.999 1 31 hm5C_associated_SNPs_45164 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr2:113260553-113260571
64251 chr2 113243551 113243551 1 + G A UCEC 113243539 + 113243519 113243559 41 GGTGAATTACTACAGGGGTGCTGACAAACTGTGTCGCAAAG GGTGAATTACTACAGGGGTGCTGACAAACTGTATCGCAAAG < 41bp 1 0.237872091347248 1 0.205895036458969 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113243539 chr2:113243551 nonsynonymous SNV 0.998 4 33 hm5C_associated_SNPs_45166 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:113243528-113243555
64251 chr16 630881 630881 1 + G A UCEC 630864 + 630844 630884 41 CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTGCAG CTCCTCTGCCACAGCTCCGGCTCCTGGTGGTCGCCGTACAG < 41bp 1 0.269217264248568 1 0.274190366268158 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:630864 chr16:630881 synonymous SNV . 0 38 hm5C_associated_SNPs_45168 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:630869-630899
64251 chr7 87530115 87530115 1 + A G UCEC 87530114 + 87530094 87530134 41 CGATAAGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAG CGATAAGTATGGTGGAACCTCGATTCAACTCCAGTTGAAAG < 41bp 1 0.178896635111943 1 0.291621267795563 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530114 chr7:87530115 synonymous SNV . 0 22 hm5C_associated_SNPs_45169 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:87530083-87530119
64251 chr7 87530115 87530115 1 + A G UCEC 87530119 + 87530099 87530139 41 AGTATGGTGGAACCTCAATTCAACTCCAGTTGAAAGAGAAG AGTATGGTGGAACCTCGATTCAACTCCAGTTGAAAGAGAAG < 41bp 1 0.243933201711609 1 0.446159332990646 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530119 chr7:87530115 synonymous SNV . 0 17 hm5C_associated_SNPs_45170 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:87530083-87530119
64251 chr7 87530115 87530115 1 + A G UCEC 87530124 + 87530104 87530144 41 GGTGGAACCTCAATTCAACTCCAGTTGAAAGAGAAGAAGAA GGTGGAACCTCGATTCAACTCCAGTTGAAAGAGAAGAAGAA < 41bp 1 0.385584096382655 1 0.651295602321625 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control DBF4 ENSG00000006634 CDS Human protein_coding chr7:87530124 chr7:87530115 synonymous SNV . 0 12 hm5C_associated_SNPs_45171 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:87530083-87530119
64251 chr3 38294315 38294315 1 + G A UCEC 38294312 + 38294292 38294332 41 TTTGTTTGGTTCTTAGGCATCTGGTGTCGAAGGCTCAGATA TTTGTTTGGTTCTTAGGCATCTGATGTCGAAGGCTCAGATA < 41bp 1 0.381579939342347 1 0.21157169342041 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38294312 chr3:38294315 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_45172 0 0 7 ALKBH5 POSTAR2 GSE38201,GSM936506 chr3:38294289-38294319
64251 chr19 46202123 46202123 1 + G A UCEC 46202126 + 46202106 46202146 41 CTACAGCCACTTCCCTCGCACGGTCCGCTGGTTCCATCGGC CTACAGCCACTTCCCTCACACGGTCCGCTGGTTCCATCGGC < 41bp 1 0.186664144792668 1 0.839542508125305 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46202126 chr19:46202123 nonsynonymous SNV 0.066 0 18 hm5C_associated_SNPs_45173 0 0 1 SND1 POSTAR2 ENCODE chr19:46202079-46202138
64251 chr5 56526790 56526790 1 + A G UCEC 56526784 + 56526764 56526804 41 GCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAAAATT GCTTTGATTCTGCTATTGGGCGTCCTGATGGAGGTAAAATT < 41bp 1 0.201495431623147 1 0.0828137099742889 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526784 chr5:56526790 nonsynonymous SNV 0.999 0 27 hm5C_associated_SNPs_45174 0 0 2 GRWD1 POSTAR2 ENCODE chr5:56526751-56526799
64251 chr10 126505165 126505165 1 + T A UCEC 126505159 + 126505139 126505179 41 TTACAGAAATCCATAACCATCAGCCTTGTTCAAAACTTTTT TTACAGAAATCCATAACCATCAGCCTAGTTCAAAACTTTTT < 41bp 1 0.251728744629644 1 0.100771427154541 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126505159 chr10:126505165 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_45176 0 0 1 PRPF8 POSTAR2 ENCODE chr10:126505161-126505220
64251 chr11 65402834 65402834 1 + C T UCEC 65402836 + 65402816 65402856 41 ACACGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGAT ACACGCCCTCCCTGCTGGTGCTGCGCCATGTCCTGGATGAT < 41bp 1 0.131238534530425 1 0.110754907131195 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402836 chr11:65402834 nonsynonymous SNV 0.992 4 19 hm5C_associated_SNPs_45177 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402834 65402834 1 + C T UCEC 65402839 + 65402819 65402859 41 CGCCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCC CGCCCTCCCTGCTGGTGCTGCGCCATGTCCTGGATGATGCC < 41bp 1 0.281152848947103 1 0.810563921928406 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402839 chr11:65402834 nonsynonymous SNV 0.992 4 16 hm5C_associated_SNPs_45178 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402834 65402834 1 + C T UCEC 65402841 + 65402821 65402861 41 CCCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTC CCCTCCCTGCTGGTGCTGCGCCATGTCCTGGATGATGCCTC < 41bp 1 0.0633037087052576 1 0.0900659263134003 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402841 chr11:65402834 nonsynonymous SNV 0.992 4 14 hm5C_associated_SNPs_45179 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr11 65402834 65402834 1 + C T UCEC 65402842 + 65402822 65402862 41 CCTCCCTGCTGGCGCTGCGCCATGTCCTGGATGATGCCTCC CCTCCCTGCTGGTGCTGCGCCATGTCCTGGATGATGCCTCC < 41bp 1 0.0898013488986853 1 0.602384805679321 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65402842 chr11:65402834 nonsynonymous SNV 0.992 4 13 hm5C_associated_SNPs_45180 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:65402829-65402862
64251 chr10 81841643 81841643 1 + C T UCEC 81841623 + 81841603 81841643 41 GTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGGCC GTCTTCTGGCCTCAGAGTATCCCTTATCAGAACCTTGGGCT < 41bp 1 0.286904967887729 1 0.0259994566440582 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient TMEM254 ENSG00000133678 CDS Human protein_coding chr10:81841623 chr10:81841643 nonsynonymous SNV 0.554 0 41 hm5C_associated_SNPs_45181 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:81841619-81841665
64251 chrX 41200757 41200757 1 + T A UCEC 41200758 + 41200738 41200778 41 TTTCTACGATAAAGACAGTTCAGGGTGGAGTTCTAGCAAAG TTTCTACGATAAAGACAGTACAGGGTGGAGTTCTAGCAAAG < 41bp 1 0.68359942499887 1 0.62121057510376 experiment 0.63280115000226 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41200758 chrX:41200757 nonsynonymous SNV 1.000 0 20 hm5C_associated_SNPs_45182 0 0 35 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:41200697-41200786
64251 chrX 41200757 41200757 1 + T A UCEC 41200770 + 41200750 41200790 41 AGACAGTTCAGGGTGGAGTTCTAGCAAAGATAAGGATGCGT AGACAGTACAGGGTGGAGTTCTAGCAAAGATAAGGATGCGT < 41bp 1 0.314485236755084 1 0.205929577350616 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX3X ENSG00000215301 CDS Human protein_coding chrX:41200770 chrX:41200757 nonsynonymous SNV 1.000 0 8 hm5C_associated_SNPs_45183 0 0 35 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:41200697-41200786
64251 chr1 87805791 87805791 1 + A G UCEC 87805775 + 87805755 87805795 41 ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAATGGC ATCGCCTGGTCCCGGGAGATCGGTTTCACTACATCAGTGGC < 41bp 1 0.416545483431495 1 0.442000269889832 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805775 chr1:87805791 nonsynonymous SNV 1.000 2 37 hm5C_associated_SNPs_45184 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:87805772-87805793
64251 chr1 244217424 244217424 1 + T C UCEC 244217405 + 244217385 244217425 41 TGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTATG TGAAGACGTGCTAGCAGCTGCCAGTTATCTCCACATGTACG < 41bp 1 0.162477838458639 1 0.105205059051514 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217405 chr1:244217424 synonymous SNV . 0 40 hm5C_associated_SNPs_45186 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:244217400-244217440
64251 chr12 57600307 57600307 1 + T G UCEC 57600323 + 57600303 57600343 41 AGCCTGTTCCCCGGCCACCCCCATTCGGCTTACGAGCAGGC AGCCGGTTCCCCGGCCACCCCCATTCGGCTTACGAGCAGGC < 41bp 1 0.0185750207400847 1 0.176496356725693 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control LRP1 ENSG00000123384 CDS Human protein_coding chr12:57600323 chr12:57600307 nonsynonymous SNV 0.912 3 5 hm5C_associated_SNPs_45189 0 0 1 RPS3 POSTAR2 ENCODE chr12:57600288-57600307
64251 chr9 116053076 116053076 1 + C A UCEC 116053079 + 116053059 116053099 41 ATCTATGGAATAAATTTCTCCCCCAATGGGTAAAATAAACA ATCTATGGAATAAATTTATCCCCCAATGGGTAAAATAAACA < 41bp 1 0.233448322849978 1 0.112582713365555 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116053079 chr9:116053076 nonsynonymous SNV 0.994 4 18 hm5C_associated_SNPs_45190 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:116053041-116053079
64251 chrX 153696876 153696876 1 + G T UCEC 153696889 + 153696869 153696909 41 AGAGCAAGAACCACCCCAAGCTGCTGCTACGCAGGTACCTG AGAGCAATAACCACCCCAAGCTGCTGCTACGCAGGTACCTG < 41bp 1 0.232190117473966 1 0.134073913097382 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLXNA3 ENSG00000130827 CDS Human protein_coding chrX:153696889 chrX:153696876 nonsynonymous SNV 0.997 4 8 hm5C_associated_SNPs_45191 0 0 2 DDX24 POSTAR2 ENCODE chrX:153696839-153696876
64251 chr6 168352448 168352448 1 + G A UCEC 168352459 + 168352439 168352479 41 ATGAAGCCCGAAAAGCCTTCCACACTCCAGCGGCCACAGGA ATGAAGCCCAAAAAGCCTTCCACACTCCAGCGGCCACAGGA < 41bp 1 0.114294226244505 1 0.0175021290779114 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168352459 chr6:168352448 nonsynonymous SNV 0.547 1 10 hm5C_associated_SNPs_45192 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:168352447-168352448
64251 chr6 125550347 125550347 1 + G T UCEC 125550344 + 125550324 125550364 41 GAGATAAAACAAAAACTCGGCATGAACCTGATGAATGAATT GAGATAAAACAAAAACTCGGCATTAACCTGATGAATGAATT < 41bp 1 0.0667746256370425 1 0.0475977063179016 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125550344 chr6:125550347 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_45193 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:125550333-125550400
64251 chr9 37501733 37501733 1 + C A UCEC 37501742 + 37501722 37501762 41 AATTTCGGATTCTATGAAGGCGAAGATTACTGCATATGTGA AATTTCGGATTATATGAAGGCGAAGATTACTGCATATGTGA < 41bp 1 0.299595262530412 1 0.307938396930695 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR1E ENSG00000137054 CDS Human protein_coding chr9:37501742 chr9:37501733 nonsynonymous SNV 0.998 4 12 hm5C_associated_SNPs_45195 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:37501716-37501738
64251 chr9 35792613 35792613 1 + G A UCEC 35792598 + 35792578 35792618 41 GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCAAACTG < 41bp 1 0.532432931222266 1 0.511166572570801 experiment 0.935134137555467 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792598 chr9:35792613 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_45196 0 0 1 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr1 214503554 214503554 1 + G T UCEC 214503545 + 214503525 214503565 41 TATTGATCTCCTGTACCCAACGGAAGATAGAAATGACCGGT TATTGATCTCCTGTACCCAACGGAAGATATAAATGACCGGT < 41bp 1 0.625174936289887 1 0.64493590593338 experiment 0.749650127420226 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214503545 chr1:214503554 nonsynonymous SNV 0.995 4 30 hm5C_associated_SNPs_45198 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214503522-214503560
64251 chr19 7589924 7589924 1 + G T UCEC 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CACCCCCATAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC < 41bp 1 0.29086826592796 1 0.091355174779892 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589924 stopgain 0.918 1 9 hm5C_associated_SNPs_45199 0 0 1 SF3B1 POSTAR2 ENCODE chr19:7589910-7589942
64251 chr2 169622173 169622173 1 + T G UCEC 169622178 + 169622158 169622198 41 GGTGGGTTTTTAACCTACTGCTATTGCTAGTACAAGGGTTG GGTGGGTTTTTAACCGACTGCTATTGCTAGTACAAGGGTTG < 41bp 1 0.101270957962163 1 0.0755776464939117 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169622178 chr2:169622173 nonsynonymous SNV 0.930 2 16 hm5C_associated_SNPs_45200 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:169622135-169622177
64251 chr20 35862434 35862434 1 + T C UCEC 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTGGATCCGGATCGGTGCCAATGTCTC < 41bp 1 0.420439539081198 1 0.475726157426834 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862434 synonymous SNV . 0 27 hm5C_associated_SNPs_45201 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:35862416-35862439
64251 chr11 722135 722135 1 + C T UCEC 722139 + 722119 722159 41 CCAGCGCCGCGGAGCTCGTGCACTTCCTCTTCGGGCCTCTG CCAGCGCCGCGGAGCTTGTGCACTTCCTCTTCGGGCCTCTG < 41bp 1 0.133579373077141 1 0.0465401411056519 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722139 chr11:722135 synonymous SNV . 0 17 hm5C_associated_SNPs_45202 0 0 1 GRWD1 POSTAR2 ENCODE chr11:722134-722154
64251 chr2 201435948 201435948 1 + A C UCEC 201435937 + 201435917 201435957 41 ATAATCTTTCTGCAGACACTCCCTGTGCAACAGTTTTAGAT ATAATCTTTCTGCAGACACTCCCTGTGCAACCGTTTTAGAT < 41bp 1 0.214340371965955 1 0.0672541260719299 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SGO2 ENSG00000163535 CDS Human protein_coding chr2:201435937 chr2:201435948 synonymous SNV . 0 32 hm5C_associated_SNPs_45203 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:201435940-201435980
64251 chr10 70666630 70666630 1 + A C UCEC 70666624 + 70666604 70666644 41 AGAAGGATTTAATAGACTTTCAGATGAATTCTCCAAATCTC AGAAGGATTTAATAGACTTTCAGATGCATTCTCCAAATCTC < 41bp 1 0.511680265184346 1 0.439142674207687 experiment 0.976639469631309 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX50 ENSG00000107625 CDS Human protein_coding chr10:70666624 chr10:70666630 nonsynonymous SNV 0.998 0 27 hm5C_associated_SNPs_45204 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70666614-70666681
64251 chr17 53852187 53852187 1 + A C UCEC 53852185 + 53852165 53852205 41 ACTTCGATAACCCGGGTGGCCAAATTCCGTCCTGGCTCATT ACTTCGATAACCCGGGTGGCCACATTCCGTCCTGGCTCATT < 41bp 1 0.382251610603269 1 0.0713023245334625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCTP ENSG00000141179 CDS Human protein_coding chr17:53852185 chr17:53852187 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_45205 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:53852170-53852193
64251 chr6 38029472 38029472 1 + G A UCEC 38029468 + 38029448 38029488 41 CACCAGTGACAACAACAATACCTCGATAACCACGCCAACTC CACCAGTGACAACAACAATACCTCAATAACCACGCCAACTC < 41bp 1 0.229578605569402 1 0.187166929244995 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38029468 chr6:38029472 synonymous SNV . 0 25 hm5C_associated_SNPs_45206 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:38029443-38029472
64251 chr6 38029472 38029472 1 + G A UCEC 38029469 + 38029449 38029489 41 ACCAGTGACAACAACAATACCTCGATAACCACGCCAACTCT ACCAGTGACAACAACAATACCTCAATAACCACGCCAACTCT < 41bp 1 0.664187763984804 1 0.725233674049377 experiment 0.671624472030392 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38029469 chr6:38029472 synonymous SNV . 0 24 hm5C_associated_SNPs_45207 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:38029443-38029472
64251 chrX 154005106 154005106 1 + G T UCEC 154005114 + 154005094 154005134 41 GAAGAAGAAGAAGAAGAAAGCAAAAGAGGTAGAATTGGTTT GAAGAAGAAGAATAAGAAAGCAAAAGAGGTAGAATTGGTTT < 41bp 1 0.680083499262874 1 0.494701117277145 experiment 0.639833001474252 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DKC1 ENSG00000130826 CDS Human protein_coding chrX:154005114 chrX:154005106 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_45208 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:154005071-154005171
64251 chr5 131953926 131953926 1 + T G UCEC 131953938 + 131953918 131953958 41 GATGATTGTTATGAGGACAACAGAACTTGTGAACAAGGATC GATGATTGGTATGAGGACAACAGAACTTGTGAACAAGGATC < 41bp 1 0.536395426813637 1 0.514515340328217 experiment 0.927209146372725 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131953938 chr5:131953926 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_45210 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:131953904-131953944
64251 chr14 76638273 76638273 1 + A G UCEC 76638267 + 76638247 76638287 41 TAATCTTCTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAG TAATCTTCTGCCCAAGTGGGCTCCTGGTCATTGTTCTGAAG < 41bp 1 0.281554833953444 1 0.189268440008163 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76638267 chr14:76638273 nonsynonymous SNV 1.000 4 27 hm5C_associated_SNPs_45211 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr14:76638194-76638323
64251 chr15 91479520 91479520 1 + G T UCEC 91479512 + 91479492 91479532 41 ACAGCGCTCCTGTTTGTGCTCAGCCATTGAAAAGGATGGTG ACAGCGCTCCTGTTTGTGCTCAGCCATTTAAAAGGATGGTG < 41bp 1 0.200789434032124 1 0.129699647426605 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control UNC45A ENSG00000140553 CDS Human protein_coding chr15:91479512 chr15:91479520 stopgain 1.000 0 29 hm5C_associated_SNPs_45212 0 0 3 BUD13 POSTAR2 ENCODE chr15:91479487-91479555
64251 chr15 52356230 52356230 1 + A C UCEC 52356223 + 52356203 52356243 41 AAGAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGA AAGAAGAAGTACAAGTTGATCCCCGAACATATTTGGATGGA < 41bp 1 0.520778867838858 1 0.369929701089859 experiment 0.958442264322285 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356223 chr15:52356230 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_45213 0 0 2 LIN28B POSTAR2 ENCODE chr15:52356168-52356294
64251 chr15 52356230 52356230 1 + A C UCEC 52356225 + 52356205 52356245 41 GAAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGA GAAGAAGTACAAGTTGATCCCCGAACATATTTGGATGGAGA < 41bp 1 0.424985248584037 1 0.312550872564316 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356225 chr15:52356230 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_45214 0 0 2 LIN28B POSTAR2 ENCODE chr15:52356168-52356294
64251 chr15 52356230 52356230 1 + A C UCEC 52356226 + 52356206 52356246 41 AAGAAGTACAAGTTGATCCCCGAAAATATTTGGATGGAGAT AAGAAGTACAAGTTGATCCCCGAACATATTTGGATGGAGAT < 41bp 1 0.201922432152665 1 0.263638764619827 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52356226 chr15:52356230 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_45215 0 0 2 LIN28B POSTAR2 ENCODE chr15:52356168-52356294
64251 chr17 21731026 21731026 1 + G T UCEC 21731040 + 21731020 21731060 41 GATAAAGAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT GATAAATAAGGCATCCCCCCCGACCAGCAGAGGCTCATCTT < 41bp 1 0.253269590955974 1 0.384202301502228 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731040 chr17:21731026 stopgain 0.514 0 7 hm5C_associated_SNPs_45216 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chrX 105891613 105891613 1 + A G UCEC 105891593 + 105891573 105891613 41 ACAAACAAAGGGAATTAAACCGGGCATGCCAAGCATCTTCA ACAAACAAAGGGAATTAAACCGGGCATGCCAAGCATCTTCG < 41bp 1 0.714074457193128 1 0.608018577098846 experiment 0.571851085613744 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105891593 chrX:105891613 nonsynonymous SNV 0.000 0 41 hm5C_associated_SNPs_45217 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:105891596-105891617
64251 chrX 49031029 49031029 1 + G C UCEC 49031034 + 49031014 49031054 41 CCTGCAGACCCCGCAGATGGCCCGGTGTAGGCGAACTTCCC CCTGCAGACCCCGCACATGGCCCGGTGTAGGCGAACTTCCC < 41bp 1 0.534671262501227 1 0.123566091060638 experiment 0.930657474997545 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PLP2 ENSG00000102007 CDS Human protein_coding chrX:49031034 chrX:49031029 nonsynonymous SNV 0.568 2 16 hm5C_associated_SNPs_45218 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49031020-49031060
64251 chr9 100405549 100405549 1 + G T UCEC 100405545 + 100405525 100405565 41 ATTAGTTGGACTACTGAATGCCAGGAATTACAATTTTGGTG ATTAGTTGGACTACTGAATGCCAGTAATTACAATTTTGGTG < 41bp 1 0.194256183207203 1 0.165948569774628 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100405545 chr9:100405549 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_45219 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100405499-100405568
64251 chr17 4859361 4859361 1 + G T UCEC 4859343 + 4859323 4859363 41 GATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGC GATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCATGC < 41bp 1 0.698498550720247 1 0.508149325847626 experiment 0.603002898559505 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859343 chr17:4859361 nonsynonymous SNV 0.997 2 39 hm5C_associated_SNPs_45240 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859344 + 4859324 4859364 41 ATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCC ATGACTTGACAGTCACCAACCCCAAGAGGATTGCCCATGCC < 41bp 1 0.538488253429809 1 0.276055067777634 experiment 0.923023493140381 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859344 chr17:4859361 nonsynonymous SNV 0.997 2 38 hm5C_associated_SNPs_45241 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859345 + 4859325 4859365 41 TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCAGGCCG TGACTTGACAGTCACCAACCCCAAGAGGATTGCCCATGCCG < 41bp 1 0.169012587530584 1 0.195262938737869 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859345 chr17:4859361 nonsynonymous SNV 0.997 2 37 hm5C_associated_SNPs_45242 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859357 + 4859337 4859377 41 CACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGG CACCAACCCCAAGAGGATTGCCCATGCCGTTGAGAAGAAGG < 41bp 1 0.133311007051351 1 0.0661524534225464 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859357 chr17:4859361 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_45243 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859358 + 4859338 4859378 41 ACCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGC ACCAACCCCAAGAGGATTGCCCATGCCGTTGAGAAGAAGGC < 41bp 1 0.0826665609094273 1 0.0722693204879761 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859358 chr17:4859361 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_45244 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859359 + 4859339 4859379 41 CCAACCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCC CCAACCCCAAGAGGATTGCCCATGCCGTTGAGAAGAAGGCC < 41bp 1 0.148122735492013 1 0.162793725728989 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859359 chr17:4859361 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_45245 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859363 + 4859343 4859383 41 CCCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCA CCCCAAGAGGATTGCCCATGCCGTTGAGAAGAAGGCCTGCA < 41bp 1 0.174871978210715 1 0.078055202960968 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859363 chr17:4859361 nonsynonymous SNV 0.997 2 19 hm5C_associated_SNPs_45246 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859364 + 4859344 4859384 41 CCCAAGAGGATTGCCCAGGCCGTTGAGAAGAAGGCCTGCAA CCCAAGAGGATTGCCCATGCCGTTGAGAAGAAGGCCTGCAA < 41bp 1 0.345388425854297 1 0.425027668476105 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859364 chr17:4859361 nonsynonymous SNV 0.997 2 18 hm5C_associated_SNPs_45247 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCATGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA < 41bp 1 0.140781727284817 1 0.0729342997074127 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859361 nonsynonymous SNV 0.997 2 4 hm5C_associated_SNPs_45248 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr17 4859361 4859361 1 + G T UCEC 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CATGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA < 41bp 1 0.774509041028427 1 0.226617425680161 experiment 0.450981917943147 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859361 nonsynonymous SNV 0.997 2 3 hm5C_associated_SNPs_45249 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4859335-4859365
64251 chr1 166818983 166818983 1 + G T UCEC 166818969 + 166818949 166818989 41 TTGATAACCAGGGCGAAAAGCCTGTCTTGGTCAAGACACCA TTGATAACCAGGGCGAAAAGCCTGTCTTGGTCAATACACCA < 41bp 1 0.0881248620313878 1 0.0535743236541748 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166818969 chr1:166818983 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45250 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166818925-166818986
64251 chr7 128445506 128445506 1 + T C UCEC 128445505 + 128445485 128445525 41 AGAAATGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGT AGAAATGGATTTCTTAGAGCCCGATCCTGAAATGCAGTTGT < 41bp 1 0.0796423921032068 1 0.275891304016113 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445505 chr7:128445506 synonymous SNV . 0 22 hm5C_associated_SNPs_45251 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr7 128445506 128445506 1 + T C UCEC 128445510 + 128445490 128445530 41 TGGATTTCTTAGAGCCTGATCCTGAAATGCAGTTGTTACGG TGGATTTCTTAGAGCCCGATCCTGAAATGCAGTTGTTACGG < 41bp 1 0.285919787589947 1 0.481176674365997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445510 chr7:128445506 synonymous SNV . 0 17 hm5C_associated_SNPs_45252 0 0 1 DDX24 POSTAR2 ENCODE chr7:128445439-128445561
64251 chr22 42032231 42032231 1 + G A UCEC 42032243 + 42032223 42032263 41 ATATTTACGTCTTACAGGAGCTGGATAATCCAGGTCAGTAA ATATTTACATCTTACAGGAGCTGGATAATCCAGGTCAGTAA < 41bp 1 0.668102698080147 1 0.31388846039772 experiment 0.663794603839705 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032243 chr22:42032231 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_45253 0 0 37 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:42032212-42032244
64251 chr1 154962719 154962719 1 + G T UCEC 154962708 + 154962688 154962728 41 CCCCTTTCCCTGAGCTGGAACAGTTTCTACAGGACACTATC CCCCTTTCCCTGAGCTGGAACAGTTTCTACATGACACTATC < 41bp 1 0.266322932388366 1 0.408698856830597 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962708 chr1:154962719 nonsynonymous SNV 0.998 1 32 hm5C_associated_SNPs_45255 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr1:154962700-154962720
64251 chr1 12061837 12061837 1 + G A UCEC 12061838 + 12061818 12061858 41 CCTCCTAGGGGGCGCTCTCGCAGAAGGCTTTCAAGTGAGGA CCTCCTAGGGGGCGCTCTCACAGAAGGCTTTCAAGTGAGGA < 41bp 1 0.798642081294122 1 0.683377027511597 experiment 0.402715837411755 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061838 chr1:12061837 nonsynonymous SNV 0.996 3 20 hm5C_associated_SNPs_45256 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:12061837-12061838
64251 chr13 115064335 115064335 1 + G T UCEC 115064352 + 115064332 115064372 41 AAAGGGAGAGGAACCAACCACAGAGAAACCAAAAGAAAGAG AAATGGAGAGGAACCAACCACAGAGAAACCAAAAGAAAGAG < 41bp 1 0.588539727430469 1 0.804012298583984 experiment 0.822920545139061 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UPF3A ENSG00000169062 CDS Human protein_coding chr13:115064352 chr13:115064335 nonsynonymous SNV 0.999 2 4 hm5C_associated_SNPs_45257 0 0 1 QKI POSTAR2 ENCODE chr13:115064296-115064347
64251 chr19 50721008 50721008 1 + C T UCEC 50721013 + 50720993 50721033 41 CAGTGACCGAGGGGGCCTATCGGAGCATGCTGCAGGGTGAG CAGTGACCGAGGGGGTCTATCGGAGCATGCTGCAGGGTGAG < 41bp 1 0.7187780869295 1 0.922472715377808 experiment 0.562443826141 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control MYH14 ENSG00000105357 CDS Human protein_coding chr19:50721013 chr19:50721008 nonsynonymous SNV 0.994 4 16 hm5C_associated_SNPs_45262 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50720995-50721014
64251 chr6 34950938 34950938 1 + C A UCEC 34950926 + 34950906 34950946 41 AAAAGATAACCATGGACTGACTGCCCTAGACACTGTTCGGG AAAAGATAACCATGGACTGACTGCCCTAGACAATGTTCGGG < 41bp 1 0.111047592335634 1 0.163932532072067 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKS1A ENSG00000064999 CDS Human protein_coding chr6:34950926 chr6:34950938 nonsynonymous SNV 1.000 2 33 hm5C_associated_SNPs_45263 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:34950934-34950953
64251 chr1 203834171 203834171 1 + T C UCEC 203834189 + 203834169 203834209 41 GGTTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGA GGCTTTGATGAGTATATGAACCTTGTATTAGATGATGCAGA < 41bp 1 0.044593175495416 1 0.0815619826316833 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SNRPE ENSG00000182004 CDS Human protein_coding chr1:203834189 chr1:203834171 synonymous SNV . 0 3 hm5C_associated_SNPs_45264 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:203834146-203834171
64251 chr3 58067463 58067463 1 + A C UCEC 58067455 + 58067435 58067475 41 CCAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAAC CCAAGCTCAAGCCGGGGGCTCCTCTCAACCCCAAACTCAAC < 41bp 1 0.0159470336532165 1 0.0564540922641754 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067455 chr3:58067463 nonsynonymous SNV 1.000 5 29 hm5C_associated_SNPs_45265 0 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr3 58067463 58067463 1 + A C UCEC 58067456 + 58067436 58067476 41 CAAGCTCAAGCCGGGGGCTCCTCTCAAACCCAAACTCAACC CAAGCTCAAGCCGGGGGCTCCTCTCAACCCCAAACTCAACC < 41bp 1 0.0559067839932157 1 0.300461113452911 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58067456 chr3:58067463 nonsynonymous SNV 1.000 5 28 hm5C_associated_SNPs_45266 0 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr2 169551556 169551556 1 + A T UCEC 169551536 + 169551516 169551556 41 TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAA TTATTGGTCTTTGATGTTTTCTCAGTTCACTGATATCAAAT < 41bp 1 0.474622839790991 1 0.382927626371384 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CERS6 ENSG00000172292 CDS Human protein_coding chr2:169551536 chr2:169551556 stopgain 1.000 1 41 hm5C_associated_SNPs_45267 0 0 1 ZNF622 POSTAR2 ENCODE chr2:169551465-169551564
64251 chr5 10391752 10391752 1 + G T UCEC 10391750 + 10391730 10391770 41 TGGGGGAAAACCCTGATGCCCAGGATGACCAGGCAGAAGAG TGGGGGAAAACCCTGATGCCCATGATGACCAGGCAGAAGAG < 41bp 1 0.69392848525688 1 0.376348555088043 experiment 0.612143029486241 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10391750 chr5:10391752 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_45276 0 0 19 SRRM4 POSTAR2 GSE57278,GSM1378374 chr5:10391740-10391760
64251 chr1 117626693 117626693 1 + A G UCEC 117626677 + 117626657 117626697 41 TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGATCCA TCCCATGGAACACTAATCATCTGTCCTGCCTCCCTGGTCCA < 41bp 1 0.165659653800578 1 0.0783667862415314 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117626677 chr1:117626693 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_45278 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117626608-117626693
64251 chr1 231377134 231377134 1 + T C UCEC 231377115 + 231377095 231377135 41 CCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTTC CCAGACCCCGCCCGGGAAGGCAGCCGCACCATGGAGTCTCC < 41bp 1 0.67566660868597 1 0.523629307746887 experiment 0.64866678262806 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231377115 chr1:231377134 nonsynonymous SNV 0.002 0 40 hm5C_associated_SNPs_45279 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr1:231377098-231377141
64251 chr1 161179377 161179377 1 + A G UCEC 161179358 + 161179338 161179378 41 CTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAG CTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAGG < 41bp 1 0.265764766209023 1 0.150936752557755 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179358 chr1:161179377 nonsynonymous SNV 0.999 5 40 hm5C_associated_SNPs_45280 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:161179339-161179385
64251 chr2 54858595 54858595 1 + C T UCEC 54858614 + 54858594 54858634 41 ACATGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGA ATATGTTTCTGCGGCAGCGGCTGCAGGCCCTGGACACTGGA < 41bp 1 0.630874148032724 1 0.596440196037292 experiment 0.738251703934551 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858614 chr2:54858595 synonymous SNV . 0 2 hm5C_associated_SNPs_45281 0 0 26 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:54858580-54858600
64251 chr9 131296145 131296145 1 + C A UCEC 131296139 + 131296119 131296159 41 TCCACCCCAGAGTGGGGGACCTCATTCTTGCTCATCTACAT TCCACCCCAGAGTGGGGGACCTCATTATTGCTCATCTACAT < 41bp 1 0.341005069171083 1 0.0866718888282776 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GLE1 ENSG00000119392 CDS Human protein_coding chr9:131296139 chr9:131296145 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_45282 0 0 2 FXR2 POSTAR2 ENCODE chr9:131296099-131296148
64251 chr12 123880948 123880948 1 + G T UCEC 123880964 + 123880944 123880984 41 CGAAGGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGGTAGT CGAATGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGGTAGT < 41bp 1 0.322797007360654 1 0.284079313278198 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT5A ENSG00000183955 CDS Human protein_coding chr12:123880964 chr12:123880948 nonsynonymous SNV 1.000 5 5 hm5C_associated_SNPs_45283 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:123880915-123880949
64251 chr1 28599958 28599958 1 + G T UCEC 28599956 + 28599936 28599976 41 TGCGGGATGAGGGGACGTCCCAGGAGGAGATGGAGAGCCGC TGCGGGATGAGGGGACGTCCCATGAGGAGATGGAGAGCCGC < 41bp 1 0.796974652901736 1 0.555298984050751 experiment 0.406050694196529 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SESN2 ENSG00000130766 CDS Human protein_coding chr1:28599956 chr1:28599958 nonsynonymous SNV 0.946 2 23 hm5C_associated_SNPs_45284 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28599928-28599962
64251 chr20 37078064 37078064 1 + G A UCEC 37078054 + 37078034 37078074 41 CGGGCTGCCTGTGCTCTGGTCATCAATAACGCAGGGAGAGG CGGGCTGCCTGTGCTCTGGTCATCAATAACACAGGGAGAGG < 41bp 1 0.304741672223415 1 0.0530121922492981 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA60 ENSG00000199266 ncRNA_exonic Human snoRNA chr20:37078054 chr20:37078064 . . 0 31 hm5C_associated_SNPs_45285 0 0 10 METTL14 POSTAR2 GSE46705,GSM1135015 chr20:37078040-37078073
64251 chr6 33169536 33169536 1 + A G UCEC 33169533 + 33169513 33169553 41 CCTCACCAGGCACTGGGGGCCACAGTGCTGATCTCAGCAGC CCTCACCAGGCACTGGGGGCCACGGTGCTGATCTCAGCAGC < 41bp 1 0.710914357690702 1 0.66612708568573 experiment 0.578171284618596 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC39A7;SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169533 chr6:33169536 synonymous SNV . 0 24 hm5C_associated_SNPs_45286 0 0 4 DDX55 POSTAR2 ENCODE chr6:33169533-33169539
64251 chr4 103500143 103500143 1 + G A UCEC 103500160 + 103500140 103500180 41 CTGGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC CTGACAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC < 41bp 1 0.602338700259892 1 0.357259780168533 experiment 0.795322599480215 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103500160 chr4:103500143 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_45287 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr4:103500123-103500143
64251 chr19 8320512 8320512 1 + G A UCEC 8320515 + 8320495 8320535 41 AGCTGTCTCTCCTGGCCGCCCAGTGTGGCCTCACGCTGCAG AGCTGTCTCTCCTGGCCACCCAGTGTGGCCTCACGCTGCAG < 41bp 1 0.60360303323127 1 0.529396176338196 experiment 0.792793933537461 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CERS4 ENSG00000090661 CDS Human protein_coding chr19:8320515 chr19:8320512 nonsynonymous SNV 0.187 0 18 hm5C_associated_SNPs_45288 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:8320470-8320523
64251 chr1 47838748 47838748 1 + C A UCEC 47838752 + 47838732 47838772 41 GGGAAGGCAGATGTATCTTTCGTTCTCTTTTTTGACTGTAA GGGAAGGCAGATGTATATTTCGTTCTCTTTTTTGACTGTAA < 41bp 1 0.149676491345365 1 0.208801805973053 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control CMPK1 ENSG00000162368 CDS Human protein_coding chr1:47838752 chr1:47838748 nonsynonymous SNV 1.000 2 17 hm5C_associated_SNPs_45289 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:47838709-47838749
64251 chr10 35854984 35854984 1 + G A UCEC 35854964 + 35854944 35854984 41 TTTGCAGGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTG TTTGCAGGAACGAGCTAGAGCGACAGTTTCTTGAATTGCTA < 41bp 1 0.61192734947329 1 0.337272375822067 experiment 0.776145301053419 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCNY ENSG00000108100 CDS Human protein_coding chr10:35854964 chr10:35854984 synonymous SNV . 0 41 hm5C_associated_SNPs_45290 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr10:35854959-35854990
64251 chr15 52339184 52339184 1 + G A UCEC 52339181 + 52339161 52339201 41 GATAGGTGACTTTGGTCTTGCACGGATCATGGATCCTCATT GATAGGTGACTTTGGTCTTGCACAGATCATGGATCCTCATT < 41bp 1 0.623793156978293 1 0.0741875767707825 experiment 0.752413686043414 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MAPK6 ENSG00000069956 CDS Human protein_coding chr15:52339181 chr15:52339184 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_45291 0 0 5 IGF2BP1 POSTAR2 ENCODE chr15:52339148-52339184
64251 chr6 7583123 7583123 1 + G T UCEC 7583125 + 7583105 7583145 41 ATATTCCCGCAAGGAGGAGGCTATTAGGAAGATAGAATCGG ATATTCCCGCAAGGAGGATGCTATTAGGAAGATAGAATCGG < 41bp 1 0.0751580570472486 1 0.0630557239055634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7583125 chr6:7583123 nonsynonymous SNV 0.997 1 19 hm5C_associated_SNPs_45292 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7583082-7583155
64251 chr16 29989096 29989096 1 + G A UCEC 29989079 + 29989059 29989099 41 GCCAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATGCCA GCCAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATACCA < 41bp 1 0.293572023007886 1 0.086406409740448 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989079 chr16:29989096 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_45294 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989080 + 29989060 29989100 41 CCAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATGCCAG CCAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATACCAG < 41bp 1 0.471125259661339 1 0.30222100019455 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989080 chr16:29989096 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_45295 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989081 + 29989061 29989101 41 CAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATGCCAGC CAGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATACCAGC < 41bp 1 0.428083539926508 1 0.310462355613708 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989081 chr16:29989096 nonsynonymous SNV 1.000 4 36 hm5C_associated_SNPs_45296 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989082 + 29989062 29989102 41 AGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATGCCAGCT AGGCCCCACTCTCAGGGCCCCCAGGGGCCACCATACCAGCT < 41bp 1 0.524707819647794 1 0.660767674446106 experiment 0.950584360704412 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989082 chr16:29989096 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45297 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989083 + 29989063 29989103 41 GGCCCCACTCTCAGGGCCCCCAGGGGCCACCATGCCAGCTG GGCCCCACTCTCAGGGCCCCCAGGGGCCACCATACCAGCTG < 41bp 1 0.768431523393102 1 0.931264042854309 experiment 0.463136953213796 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989083 chr16:29989096 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_45298 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989108 + 29989088 29989128 41 GCCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA GCCACCATACCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGA < 41bp 1 0.493133361272845 1 0.587226808071136 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989108 chr16:29989096 nonsynonymous SNV 1.000 4 9 hm5C_associated_SNPs_45299 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr16 29989096 29989096 1 + G A UCEC 29989109 + 29989089 29989129 41 CCACCATGCCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC CCACCATACCAGCTGGGGGCCGGGCCGGGAGCCTGAAGGAC < 41bp 1 0.439225129524553 1 0.572208166122437 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TAOK2 ENSG00000149930 CDS Human protein_coding chr16:29989109 chr16:29989096 nonsynonymous SNV 1.000 4 8 hm5C_associated_SNPs_45300 0 0 3 BUD13 POSTAR2 ENCODE chr16:29989042-29989102
64251 chr20 44038655 44038655 1 + T C UCEC 44038672 + 44038652 44038692 41 TCCTCCGACTCCTCCACCAACCTGCATAGCCCAAATCCAAG TCCCCCGACTCCTCCACCAACCTGCATAGCCCAAATCCAAG < 41bp 1 0.0992292163560978 1 0.429748505353928 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DBNDD2 ENSG00000244274 CDS Human protein_coding chr20:44038672 chr20:44038655 nonsynonymous SNV 0.529 2 4 hm5C_associated_SNPs_45302 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:44038603-44038674
64251 chr3 186504022 186504022 1 + A G UCEC 186504005 + 186503985 186504025 41 GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATCAAAT GAAGCAGATGAAATGTTGAGCCGTGGTTTTAAGGATCGAAT < 41bp 1 0.15248777527213 1 0.112883985042572 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186504005 chr3:186504022 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_45303 0 0 28 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186503960-186504024
64251 chr16 24580545 24580545 1 + A G UCEC 24580557 + 24580537 24580577 41 TAAAGGTTATGCTGCTGGAGCACAGCCTAGACCCTCAGCAA TAAAGGTTGTGCTGCTGGAGCACAGCCTAGACCCTCAGCAA < 41bp 1 0.339421533023716 1 0.363956391811371 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBBP6 ENSG00000122257 CDS Human protein_coding chr16:24580557 chr16:24580545 nonsynonymous SNV 0.985 1 9 hm5C_associated_SNPs_45304 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:24580536-24580557
64251 chr11 65268433 65268433 1 + G A UCEC 65268439 + 65268419 65268459 41 CTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATA CTGAAGCTTTTGAGAGCAGACTGCCAAGTCCTGGAGAAATA < 41bp 1 0.252265789189064 1 0.0764643847942352 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268439 chr11:65268433 . . 0 15 hm5C_associated_SNPs_45305 0 0 133 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268420-65268440
64251 chr11 65268433 65268433 1 + G A UCEC 65268449 + 65268429 65268469 41 TGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCA TGAGAGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCA < 41bp 1 0.793309966121094 1 0.573239028453827 experiment 0.413380067757812 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268449 chr11:65268433 . . 0 5 hm5C_associated_SNPs_45306 0 0 133 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:65268420-65268440
64251 chr1 28862530 28862530 1 + A G UCEC 28862519 + 28862499 28862539 41 CACGTGTACGGCTTCGGCCTCTCCAACTACCATCAGCTTGG CACGTGTACGGCTTCGGCCTCTCCAACTACCGTCAGCTTGG < 41bp 1 0.737075121874874 1 0.907440721988678 experiment 0.525849756250252 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862519 chr1:28862530 nonsynonymous SNV 0.992 2 32 hm5C_associated_SNPs_45307 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:28862460-28862540
64251 chr17 37883745 37883745 1 + C T UCEC 37883734 + 37883714 37883754 41 TACAGCGGTACAGTGAGGACCCCACAGTACCCCTGCCCTCT TACAGCGGTACAGTGAGGACCCCACAGTACCTCTGCCCTCT < 41bp 1 0.0678491648098987 1 0.111555606126785 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37883734 chr17:37883745 synonymous SNV . 0 32 hm5C_associated_SNPs_45308 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:37883738-37883781
64251 chr7 100470814 100470814 1 + C T UCEC 100470816 + 100470796 100470836 41 GTGTGGGCTGCTGCTCTCCTCTGAGGGCGAGTGTCAGGGCT GTGTGGGCTGCTGCTCTCTTCTGAGGGCGAGTGTCAGGGCT < 41bp 1 0.793776675134013 1 0.860057234764099 experiment 0.412446649731974 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470816 chr7:100470814 synonymous SNV . 0 19 hm5C_associated_SNPs_45309 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100470785-100470859
64251 chr17 16342830 16342830 1 + T C UCEC 16342848 + 16342828 16342868 41 GATACTTGTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC GACACTTGTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC < 41bp 1 0.0233885803062228 1 0.282485365867615 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD49B ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342848 chr17:16342830 . . 0 3 hm5C_associated_SNPs_45313 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16342775-16343006
64251 chr12 51112790 51112790 1 + A G UCEC 51112772 + 51112752 51112792 41 AGAGATCCTACAGTGGCGAGCCCAGGCGACTCCTGACCATG AGAGATCCTACAGTGGCGAGCCCAGGCGACTCCTGACCGTG < 41bp 1 0.192757564705878 1 0.156714230775833 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51112772 chr12:51112790 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_45314 0 0 3 LIN28B POSTAR2 ENCODE chr12:51112735-51112792
64251 chr12 51112790 51112790 1 + A G UCEC 51112773 + 51112753 51112793 41 GAGATCCTACAGTGGCGAGCCCAGGCGACTCCTGACCATGT GAGATCCTACAGTGGCGAGCCCAGGCGACTCCTGACCGTGT < 41bp 1 0.231752019358531 1 0.434434592723846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51112773 chr12:51112790 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_45315 0 0 3 LIN28B POSTAR2 ENCODE chr12:51112735-51112792
64251 chr3 184584687 184584687 1 + T A UCEC 184584699 + 184584679 184584719 41 AAGGCTTGTTATCAATCCATCAGTAGCTATGGTGGTCAGAT AAGGCTTGATATCAATCCATCAGTAGCTATGGTGGTCAGAT < 41bp 1 0.208969959820263 1 0.356925755739212 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS8 ENSG00000156931 CDS Human protein_coding chr3:184584699 chr3:184584687 stopgain 0.998 1 9 hm5C_associated_SNPs_45317 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:184584664-184584692
64251 chrX 73042371 73042371 1 - A T UCEC 73042369 - 73042349 73042389 41 AGAATATAGGAGAAAGGTTACTGTTTATTTTTTTTCATGTA AGAATATAGGAGAAAGGTAACTGTTTATTTTTTTTCATGTA < 41bp 1 0.0638669893036544 1 0.129810392856598 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042369 chrX:73042371 . . 0 19 hm5C_associated_SNPs_45318 0 0 61 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73040480-73042460
64251 chr3 128973581 128973581 1 + A G UCEC 128973582 + 128973562 128973602 41 GCGAGCCCTCTGCCAGATCACTGATGTGAGTCGTGCCGGTT GCGAGCCCTCTGCCAGATCGCTGATGTGAGTCGTGCCGGTT < 41bp 1 0.6469934977521 1 0.128329038619995 experiment 0.7060130044958 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973582 chr3:128973581 nonsynonymous SNV 0.875 4 20 hm5C_associated_SNPs_45319 0 0 5 BUD13 POSTAR2 ENCODE chr3:128973465-128973586
64251 chr8 98837316 98837316 1 + T C UCEC 98837312 + 98837292 98837332 41 TTGATTAGCTGTGTTTGGAACTGCTACCGATACATCAATGG TTGATTAGCTGTGTTTGGAACTGCCACCGATACATCAATGG < 41bp 1 0.178873904388168 1 0.0903472304344177 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LAPTM4B ENSG00000104341 CDS Human protein_coding chr8:98837312 chr8:98837316 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_45320 0 0 23 LIN28A POSTAR2 GSE39873,GSM980593 chr8:98837280-98837340
64251 chr15 63866345 63866345 1 + T C UCEC 63866342 + 63866322 63866362 41 CAGAATCTAGAAAGTTTGATCCATTCCTAGGTAAGATATAT CAGAATCTAGAAAGTTTGATCCACTCCTAGGTAAGATATAT < 41bp 1 0.0382137718500345 1 0.0851966738700867 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP3 ENSG00000140455 CDS Human protein_coding chr15:63866342 chr15:63866345 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_45325 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:63866324-63866348
64251 chr5 37022456 37022456 1 + T C UCEC 37022445 + 37022425 37022465 41 GTCGATTTGTCCTTTGTCGACCTCAGCTTGCTGAACAGTAT GTCGATTTGTCCTTTGTCGACCTCAGCTTGCCGAACAGTAT < 41bp 1 0.0890926880587383 1 0.051024466753006 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIPBL ENSG00000164190 CDS Human protein_coding chr5:37022445 chr5:37022456 synonymous SNV . 0 32 hm5C_associated_SNPs_45326 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr5:37022416-37022458
64251 chr8 144732948 144732948 1 + T C UCEC 144732951 + 144732931 144732971 41 GGGAAGGCATTCCGTCATCGCTCAGACCTTATTGAACACCA GGGAAGGCATTCCGTCACCGCTCAGACCTTATTGAACACCA < 41bp 1 0.454738278137062 1 0.272699147462845 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732951 chr8:144732948 synonymous SNV . 0 18 hm5C_associated_SNPs_45327 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:144732906-144732960
64251 chr11 66411237 66411237 1 + T C UCEC 66411252 + 66411232 66411272 41 TATAATTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT TATAACTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT < 41bp 1 0.0501249800926858 1 0.0258961021900177 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411252 chr11:66411237 synonymous SNV . 0 6 hm5C_associated_SNPs_45328 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:66411206-66411237
64251 chr1 154207164 154207164 1 + G A UCEC 154207147 + 154207127 154207167 41 ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCGGGA ACGGAATCCAATGAGGAAGGCAAAGAAAATCGAGACCAGGA < 41bp 1 0.41822906615012 1 0.345891237258911 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207147 chr1:154207164 nonsynonymous SNV 1.000 2 38 hm5C_associated_SNPs_45329 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154207109-154207200
64251 chr19 45490640 45490640 1 + G A UCEC 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATAAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG < 41bp 1 0.666407347390283 1 0.6779865026474 experiment 0.667185305219433 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490640 nonsynonymous SNV 0.164 1 5 hm5C_associated_SNPs_45330 0 0 8 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:45490606-45490642
64251 chr19 45490658 45490658 1 + G A UCEC 45490656 + 45490636 45490676 41 TGATGAGTTGTACGAGCAGTCAGATGAGGAGCAGGACTCGG TGATGAGTTGTACGAGCAGTCAAATGAGGAGCAGGACTCGG < 41bp 1 0.538735070980465 1 0.69463574886322 experiment 0.92252985803907 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45490656 chr19:45490658 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_45331 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45490645-45490675
64251 chr17 7592189 7592189 1 + C T UCEC 7592180 + 7592160 7592200 41 AGGAGCTACGGGAGGGGGACCCAGTTTCTCTCTCCACTCCC AGGAGCTACGGGAGGGGGACCCAGTTTCTTTCTCCACTCCC < 41bp 1 0.34280201724818 1 0.254852294921875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592180 chr17:7592189 nonsynonymous SNV 0.004 0 30 hm5C_associated_SNPs_45332 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:7592189-7592190
64251 chr20 18142514 18142514 1 + A G UCEC 18142508 + 18142488 18142528 41 CCATCATTACTGTTGAGGGACTTAGAAAACGAGCAAGTCGG CCATCATTACTGTTGAGGGACTTAGAGAACGAGCAAGTCGG < 41bp 1 0.102140071856127 1 0.0413108468055725 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KAT14 ENSG00000149474 CDS Human protein_coding chr20:18142508 chr20:18142514 nonsynonymous SNV 1.000 2 27 hm5C_associated_SNPs_45333 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:18142497-18142547
64251 chr5 131977956 131977956 1 + C A UCEC 131977975 + 131977955 131977995 41 TCTGAATATGTGGAGAAATTCTACAGGATTAAAAAGAACAT TATGAATATGTGGAGAAATTCTACAGGATTAAAAAGAACAT < 41bp 1 0.68962342497125 1 0.720050573348999 experiment 0.6207531500575 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAD50 ENSG00000113522 CDS Human protein_coding chr5:131977975 chr5:131977956 nonsynonymous SNV 1.000 3 2 hm5C_associated_SNPs_45334 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:131977890-131977996
64251 chrX 70776896 70776896 1 + G A UCEC 70776893 + 70776873 70776913 41 GAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCT GAGCCTTGCAGTGTTATACGCGTACCATCCAAATTAATCCT < 41bp 1 0.0943578796415775 1 0.0198173820972443 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70776893 chrX:70776896 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_45336 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70776896-70776920
64251 chrX 69354614 69354614 1 + G T UCEC 69354607 + 69354587 69354627 41 GAAAATCACACTGCCAATTCCTCCATGGCTTATCCTAGTCT GAAAATCACACTGCCAATTCCTCCATGTCTTATCCTAGTCT < 41bp 1 0.661521248124234 1 0.879114985466003 experiment 0.676957503751532 Functional Loss 31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69354607 chrX:69354614 nonsynonymous SNV 0.999 0 28 hm5C_associated_SNPs_45337 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:69354587-69354624
64251 chr12 98926761 98926761 1 + G T UCEC 98926754 + 98926734 98926774 41 GGGCAGTACCGAACTACAGGCAGCTAAGAAAGTACATACTT GGGCAGTACCGAACTACAGGCAGCTAATAAAGTACATACTT < 41bp 1 0.420030346508459 1 0.243809133768082 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98926754 chr12:98926761 nonsynonymous SNV 0.992 0 28 hm5C_associated_SNPs_45338 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:98926712-98926775
64251 chr8 97332509 97332509 1 + A C UCEC 97332495 + 97332475 97332515 41 GTCATTGGTTTCCTGGAGGCCATTGTTTGCATAAAATTTGG GTCATTGGTTTCCTGGAGGCCATTGTTTGCATAACATTTGG < 41bp 1 0.116981284434852 1 0.0771222412586212 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97332495 chr8:97332509 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45339 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:97332500-97332520
64251 chr19 19627025 19627025 1 + C A UCEC 19627040 + 19627020 19627060 41 GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA GGGACAGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA < 41bp 1 0.669965393041339 1 0.301745027303696 experiment 0.660069213917321 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19627040 chr19:19627025 nonsynonymous SNV . 0 6 hm5C_associated_SNPs_45340 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr12 123880945 123880945 1 + G A UCEC 123880964 + 123880944 123880984 41 CGAAGGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGGTAGT CAAAGGAGCTCCAGGAAGAGCAAAGCCGAGCTGCAGGTAGT < 41bp 1 0.343082626260412 1 0.393498599529266 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control KMT5A ENSG00000183955 CDS Human protein_coding chr12:123880964 chr12:123880945 nonsynonymous SNV 0.997 4 2 hm5C_associated_SNPs_45341 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:123880915-123880949
64251 chr18 74622053 74622053 1 + C T UCEC 74622068 + 74622048 74622088 41 CTCTGCGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCT CTCTGTGAGGGCACGTAGACCAGTTTGAAGAGCAGAGCCCT < 41bp 1 0.324578311731258 1 0.344461441040039 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ZNF236 ENSG00000130856 CDS Human protein_coding chr18:74622068 chr18:74622053 stopgain 0.343 0 6 hm5C_associated_SNPs_45342 0 0 2 BUD13 POSTAR2 ENCODE chr18:74622015-74622079
64251 chr9 100410445 100410445 1 + T G UCEC 100410432 + 100410412 100410452 41 GCCTCCTTTTACACCACCTCCTCACACTGAAGATTCAGTGT GCCTCCTTTTACACCACCTCCTCACACTGAAGAGTCAGTGT < 41bp 1 0.172653273077132 1 0.115703046321869 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100410432 chr9:100410445 nonsynonymous SNV 0.991 1 34 hm5C_associated_SNPs_45343 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:100410444-100410445
64251 chr20 31019214 31019214 1 + C A UCEC 31019221 + 31019201 31019241 41 GCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATCACA GCCCTGATCAACTATCGGACCTTCCATGCCTTACCATCACA < 41bp 1 0.0711891850823915 1 0.0743148028850555 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31019221 chr20:31019214 nonsynonymous SNV 0.997 3 14 hm5C_associated_SNPs_45344 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:31019178-31019214
64251 chr21 47706928 47706928 1 + A C UCEC 47706944 + 47706924 47706964 41 CAGAAATTTGACCTGGGGATCATCTGTGTTGACAACAAGAA CAGACATTTGACCTGGGGATCATCTGTGTTGACAACAAGAA < 41bp 1 0.13735910219881 1 0.143496990203857 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control YBEY ENSG00000182362 CDS Human protein_coding chr21:47706944 chr21:47706928 nonsynonymous SNV 0.016 0 5 hm5C_associated_SNPs_45345 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:47706923-47706951
64251 chr22 29695805 29695805 1 + G T UCEC 29695816 + 29695796 29695836 41 TGGGAGGAAGAAGAGGAGGACGTGGAGGACCTGGAAAAATG TGGGAGGAATAAGAGGAGGACGTGGAGGACCTGGAAAAATG < 41bp 1 0.5590970743548 1 0.295433938503265 experiment 0.881805851290399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695816 chr22:29695805 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_45346 0 0 43 TARDBP POSTAR2 DRA001158,DRS012387 chr22:29695778-29695833
64251 chr22 29695805 29695805 1 + G T UCEC 29695825 + 29695805 29695845 41 GAAGAGGAGGACGTGGAGGACCTGGAAAAATGGATAAGTAA TAAGAGGAGGACGTGGAGGACCTGGAAAAATGGATAAGTAA < 41bp 1 0.302993001130738 1 0.260825932025909 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695825 chr22:29695805 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_45347 0 0 43 TARDBP POSTAR2 DRA001158,DRS012387 chr22:29695778-29695833
64251 chr16 78143678 78143678 1 + T A UCEC 78143695 + 78143675 78143715 41 ATTTGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA ATTAGCCATACGGATGGGAACAAGAAACTGATGAGAACGGA < 41bp 1 0.393545459934667 1 0.38224983215332 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control WWOX ENSG00000186153 CDS Human protein_coding chr16:78143695 chr16:78143678 stopgain 0.999 1 4 hm5C_associated_SNPs_45348 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:78143660-78143680
64251 chr15 44673156 44673156 1 + T G UCEC 44673143 + 44673123 44673163 41 CTAAAGCAGGCTACCAAGGACAGAGTCAGTGATTTCCATAA CTAAAGCAGGCTACCAAGGACAGAGTCAGTGATGTCCATAA < 41bp 1 0.505286758709453 1 0.372665584087372 experiment 0.989426482581095 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CASC4 ENSG00000166734 CDS Human protein_coding chr15:44673143 chr15:44673156 nonsynonymous SNV 0.998 0 34 hm5C_associated_SNPs_45349 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:44673135-44673161
64251 chr1 91980456 91980456 1 + G T UCEC 91980446 + 91980426 91980466 41 AAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAGTGCTG AAAAAAGAAGGCTATTTCTACAAAAGTTATTAATAGTGCTG < 41bp 1 0.636268318614683 1 0.452239722013474 experiment 0.727463362770633 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980446 chr1:91980456 nonsynonymous SNV 0.875 0 31 hm5C_associated_SNPs_45350 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:91980440-91980460
64251 chr1 154233542 154233542 1 + C T UCEC 154233546 + 154233526 154233566 41 TACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTCCAGTA TACTATACAGGGGTCCTGGGCCTCCCCAGCACCTTCCAGTA < 41bp 1 0.0813348294468761 1 0.0628930926322937 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154233546 chr1:154233542 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_45351 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:154233522-154233543
64251 chr6 4937927 4937927 1 + A T UCEC 4937916 + 4937896 4937936 41 TTGACTTTATTTATTTTATACGACGTCTGACAGATGACAGG TTGACTTTATTTATTTTATACGACGTCTGACTGATGACAGG < 41bp 1 0.422628334295252 1 0.306040227413177 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDYL ENSG00000153046 CDS Human protein_coding chr6:4937916 chr6:4937927 synonymous SNV . 0 32 hm5C_associated_SNPs_45353 0 0 6 ALKBH5 POSTAR2 GSE38201,GSM936506 chr6:4937902-4937929
64251 chr8 145169221 145169221 1 + T C UCEC 145169220 + 145169200 145169240 41 CGATCGAGGGCCTGGCCTCGCTGTTGGTGGCCCTGCTGGAG CGATCGAGGGCCTGGCCTCGCCGTTGGTGGCCCTGCTGGAG < 41bp 1 0.184805782060057 1 0.499244958162308 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control WDR97 ENSG00000179698 CDS Human protein_coding chr8:145169220 chr8:145169221 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_45354 0 0 3 PRPF8 POSTAR2 ENCODE chr8:145169078-145169228
64251 chr19 52196895 52196895 1 + G A UCEC 52196899 + 52196879 52196919 41 TACTCTGAGCGCCTCCGCATCTGCCAGATGTTTGTTGGGAT TACTCTGAGCGCCTCCACATCTGCCAGATGTTTGTTGGGAT < 41bp 1 0.238226290383581 1 0.386158972978592 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPACA6 ENSG00000182310;ENSG00000273318 ncRNA_exonic Human other chr19:52196899 chr19:52196895 . . 0 17 hm5C_associated_SNPs_45356 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52196804-52196904
64251 chr13 61034608 61034608 1 + G A UCEC 61034613 + 61034593 61034633 41 CACCAAGGATGCTGCGATTACAGATGACTGATGGTCATATA CACCAAGGATGCTGCAATTACAGATGACTGATGGTCATATA < 41bp 1 0.673306734675695 1 0.719131648540497 experiment 0.65338653064861 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TDRD3 ENSG00000083544 CDS Human protein_coding chr13:61034613 chr13:61034608 nonsynonymous SNV 0.994 3 16 hm5C_associated_SNPs_45357 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:61034578-61034609
64251 chr18 77474852 77474852 1 + C T UCEC 77474860 + 77474840 77474880 41 CAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT CAGCAGTGAGTCTGAGGGCACGAAGTCCTCCTCCTCCGCCT < 41bp 1 0.595224099032702 1 0.29951000213623 experiment 0.809551801934595 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CTDP1 ENSG00000060069 CDS Human protein_coding chr18:77474860 chr18:77474852 synonymous SNV . 0 13 hm5C_associated_SNPs_45358 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:77474843-77474858
64251 chr1 87208040 87208040 1 + G A UCEC 87208023 + 87208003 87208043 41 ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTGTAG ATCACCTCTCCTTCCAACCTCAGTGACCTTAAGGAGTATAG < 41bp 1 0.317295717582067 1 0.191675812005997 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SH3GLB1 ENSG00000097033 CDS Human protein_coding chr1:87208023 chr1:87208040 nonsynonymous SNV 0.933 0 38 hm5C_associated_SNPs_45359 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:87208023-87208055
64251 chr15 90617495 90617495 1 + G A UCEC 90617476 + 90617456 90617496 41 AAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCATGGCGT AAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCATGGCAT < 41bp 1 0.483230725780196 1 0.236161440610886 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90617476 chr15:90617495 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_45360 0 0 1 PRPF8 POSTAR2 ENCODE chr15:90617484-90617573
64251 chr7 100867114 100867114 1 + A C UCEC 100867120 + 100867100 100867140 41 TCTGGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGC TCTGGGGACCCACCCGGAGACCAGGTGAGCATGAGACCTGC < 41bp 1 0.689799834569284 1 0.567653715610504 experiment 0.620400330861431 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867120 chr7:100867114 nonsynonymous SNV 1.000 1 15 hm5C_associated_SNPs_45362 0 0 4 LARP4 POSTAR2 ENCODE chr7:100867020-100867121
64251 chr7 100867114 100867114 1 + A C UCEC 100867121 + 100867101 100867141 41 CTGGGGACCCACCAGGAGACCAGGTGAGCATGAGACCTGCT CTGGGGACCCACCCGGAGACCAGGTGAGCATGAGACCTGCT < 41bp 1 0.725978700183636 1 0.564188361167908 experiment 0.548042599632729 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867121 chr7:100867114 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_45363 0 0 4 LARP4 POSTAR2 ENCODE chr7:100867020-100867121
64251 chr11 63676423 63676423 1 + G A UCEC 63676421 + 63676401 63676441 41 GAGGCCAAGCCCCGCTCCCTCCGCTTCACGTGGAGTATGAA GAGGCCAAGCCCCGCTCCCTCCACTTCACGTGGAGTATGAA < 41bp 1 0.078871680863658 1 0.247416019439697 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MARK2 ENSG00000072518 CDS Human protein_coding chr11:63676421 chr11:63676423 nonsynonymous SNV 0.875 4 23 hm5C_associated_SNPs_45386 0 0 1 FXR2 POSTAR2 ENCODE chr11:63676390-63676501
64251 chr1 151236409 151236409 1 + A C UCEC 151236410 + 151236390 151236430 41 TGACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGCC TGACTGTGAAGTGCTGACCCCACTCACCCCAGACACTGGCC < 41bp 1 0.118366693282894 1 0.0996169745922089 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151236410 chr1:151236409 nonsynonymous SNV 0.997 4 20 hm5C_associated_SNPs_45390 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:151236380-151236410
64251 chr17 27187487 27187487 1 + G T UCEC 27187506 + 27187486 27187526 41 AGATAGCACAGGAGGCAGGCCATGACCTCATGGACATCTTC ATATAGCACAGGAGGCAGGCCATGACCTCATGGACATCTTC < 41bp 1 0.589432312335166 1 0.0752125084400177 experiment 0.821135375329668 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27187506 chr17:27187487 nonsynonymous SNV 0.843 1 2 hm5C_associated_SNPs_45391 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:27187487-27187520
64251 chr10 133761098 133761098 1 + C T UCEC 133761091 + 133761071 133761111 41 CTTCTCAGAAATAATTTCATCCATATCCGATGTAAAATTCA CTTCTCAGAAATAATTTCATCCATATCTGATGTAAAATTCA < 41bp 1 0.153133777277877 1 0.221312642097473 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133761091 chr10:133761098 synonymous SNV . 0 28 hm5C_associated_SNPs_45395 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:133761062-133761100
64251 chrX 40996139 40996139 1 + T G UCEC 40996126 + 40996106 40996146 41 AGTTGTCCCAAGACTGGTTTCCACTTTTAGAACTTCTTGCC AGTTGTCCCAAGACTGGTTTCCACTTTTAGAACGTCTTGCC < 41bp 1 0.133783442496302 1 0.377118170261383 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control USP9X ENSG00000124486 CDS Human protein_coding chrX:40996126 chrX:40996139 nonsynonymous SNV 0.999 4 34 hm5C_associated_SNPs_45396 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:40996068-40996152
64251 chr1 145517317 145517317 1 + G T UCEC 145517304 + 145517284 145517324 41 ATGCTTGCTCTCTTCTTGGCCATGCGCTGCAGAGGCATGGA ATGCTTGCTCTCTTCTTGGCCATGCGCTGCAGATGCATGGA < 41bp 1 0.11198349021362 1 0.292532920837402 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PEX11B ENSG00000131779 CDS Human protein_coding chr1:145517304 chr1:145517317 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_45397 0 0 3 DDX3X POSTAR2 ENCODE chr1:145517272-145517332
64251 chr19 12924224 12924224 1 + C T UCEC 12924210 + 12924190 12924230 41 CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTT CTACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCTGTTCTT < 41bp 1 0.332137589734608 1 0.0452612638473511 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924210 chr19:12924224 nonsynonymous SNV 0.001 3 35 hm5C_associated_SNPs_45398 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924224 12924224 1 + C T UCEC 12924211 + 12924191 12924231 41 TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTC TACTTCCTCAATGAAGGGTCCCAAGCCCGTCCCTGTTCTTC < 41bp 1 0.0975549303653673 1 0.0388606786727905 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924211 chr19:12924224 nonsynonymous SNV 0.001 3 34 hm5C_associated_SNPs_45399 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr19 12924224 12924224 1 + C T UCEC 12924232 + 12924212 12924252 41 CAAGCCCGTCCCCGTTCTTCCCACCGATATTTCCTGGAACG CAAGCCCGTCCCTGTTCTTCCCACCGATATTTCCTGGAACG < 41bp 1 0.15296346225012 1 0.0705824494361877 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924232 chr19:12924224 nonsynonymous SNV 0.001 3 13 hm5C_associated_SNPs_45400 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr3 126739157 126739157 1 + C T UCEC 126739145 + 126739125 126739165 41 ACATATGCCATGCGGGTGCTCTTTCCTGGGATCGAGGACCA ACATATGCCATGCGGGTGCTCTTTCCTGGGATTGAGGACCA < 41bp 1 0.0691010718963711 1 0.182533651590347 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126739145 chr3:126739157 synonymous SNV . 0 33 hm5C_associated_SNPs_45401 0 0 2 FXR2 POSTAR2 ENCODE chr3:126739080-126739181
64251 chr8 145065447 145065447 1 + C A UCEC 145065439 + 145065419 145065459 41 TCTGGGGACAACTATCCTCCCCCCAACCCTGGATATCCGGG TCTGGGGACAACTATCCTCCCCCCAACCATGGATATCCGGG < 41bp 1 0.396925928905938 1 0.170496791601181 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GRINA ENSG00000178719 CDS Human protein_coding chr8:145065439 chr8:145065447 nonsynonymous SNV 0.748 1 29 hm5C_associated_SNPs_45402 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:145065440-145065460
64251 chr6 26045870 26045870 1 + G A UCEC 26045888 + 26045868 26045908 41 AGGACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGTG AGAACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGTG < 41bp 1 0.0574804017038503 1 0.0678058266639709 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H3C ENSG00000196532 CDS Human other chr6:26045888 chr6:26045870 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_45405 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr17 78349653 78349653 1 + C T UCEC 78349659 + 78349639 78349679 41 CCCACAATGCAAGCCTCCACCCCACGCCAGAGGTGAGTAAC CCCACAATGCAAGCTTCCACCCCACGCCAGAGGTGAGTAAC < 41bp 1 0.0246435188940108 1 0.147076845169067 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78349659 chr17:78349653 nonsynonymous SNV 0.075 0 15 hm5C_associated_SNPs_45406 0 0 8 BUD13 POSTAR2 ENCODE chr17:78349625-78349660
64251 chr18 60645868 60645868 1 + A G UCEC 60645885 + 60645865 60645905 41 TGAACATGGTGATCAAGGATCGGCCCTCAGATGGGCTGGGC TGAGCATGGTGATCAAGGATCGGCCCTCAGATGGGCTGGGC < 41bp 1 0.266839918185009 1 0.194424450397491 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHLPP1 ENSG00000081913 CDS Human protein_coding chr18:60645885 chr18:60645868 nonsynonymous SNV 0.685 0 4 hm5C_associated_SNPs_45407 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr18:60645850-60645872
64251 chr15 69747822 69747822 1 + C T UCEC 69747803 + 69747783 69747823 41 GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGACA GGAAGCAAAGAAAGAAGAATCCGAGGAGTCTGATGATGATA < 41bp 1 0.37873107504791 1 0.494189321994781 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747803 chr15:69747822 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_45408 0 0 50 UPF1 POSTAR2 GSE69586,GSM1704217 chr15:69747760-69747860
64251 chr1 150530030 150530030 1 + G A UCEC 150530042 + 150530022 150530062 41 GGATGAACGCAGCTGTGCCGCGGGTGCCAGGCCCCCAGCCT GGATGAACACAGCTGTGCCGCGGGTGCCAGGCCCCCAGCCT < 41bp 1 0.791416141593547 1 0.913161277770996 experiment 0.417167716812906 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control ADAMTSL4 ENSG00000143382 CDS Human protein_coding chr1:150530042 chr1:150530030 nonsynonymous SNV 0.329 0 9 hm5C_associated_SNPs_45409 0 0 2 DDX24 POSTAR2 ENCODE chr1:150530023-150530050
64251 chr17 62223732 62223732 1 + T C UCEC 62223713 + 62223693 62223733 41 GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTG GGCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGCG < 41bp 1 0.160584520282829 1 0.170551747083664 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223713 chr17:62223732 . . 0 40 hm5C_associated_SNPs_45410 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223714 + 62223694 62223734 41 GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGG GCGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGCGG < 41bp 1 0.341604257971956 1 0.192669093608856 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223714 chr17:62223732 . . 0 39 hm5C_associated_SNPs_45411 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223715 + 62223695 62223735 41 CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGC CGACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGCGGC < 41bp 1 0.24987500792927 1 0.179640620946884 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223715 chr17:62223732 . . 0 38 hm5C_associated_SNPs_45412 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223716 + 62223696 62223736 41 GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCG GACGCGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGCGGCG < 41bp 1 0.135514087048894 1 0.0753505229949951 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223716 chr17:62223732 . . 0 37 hm5C_associated_SNPs_45413 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223720 + 62223700 62223740 41 CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGG CGCTGTCTTTGAGCCCCCGCCGAGCTTCCTCGCGGCGCCGG < 41bp 1 0.589579646209702 1 0.705561816692352 experiment 0.820840707580596 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223720 chr17:62223732 . . 0 33 hm5C_associated_SNPs_45414 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223727 + 62223707 62223747 41 TTTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAA TTTGAGCCCCCGCCGAGCTTCCTCGCGGCGCCGGGGGTCAA < 41bp 1 0.221358322544383 1 0.149173498153687 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223727 chr17:62223732 . . 0 26 hm5C_associated_SNPs_45415 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223728 + 62223708 62223748 41 TTGAGCCCCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAAT TTGAGCCCCCGCCGAGCTTCCTCGCGGCGCCGGGGGTCAAT < 41bp 1 0.54860515975765 1 0.205150693655014 experiment 0.902789680484699 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223728 chr17:62223732 . . 0 25 hm5C_associated_SNPs_45416 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223735 + 62223715 62223755 41 CCCGCCGAGCTTCCTCGTGGCGCCGGGGGTCAATCTGCAGC CCCGCCGAGCTTCCTCGCGGCGCCGGGGGTCAATCTGCAGC < 41bp 1 0.577444237437735 1 0.193418473005295 experiment 0.84511152512453 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223735 chr17:62223732 . . 0 18 hm5C_associated_SNPs_45417 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr17 62223732 62223732 1 + T C UCEC 62223745 + 62223725 62223765 41 TTCCTCGTGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT TTCCTCGCGGCGCCGGGGGTCAATCTGCAGCGCTAGAGCAT < 41bp 1 0.219907231941754 1 0.121196806430817 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223745 chr17:62223732 . . 0 8 hm5C_associated_SNPs_45418 0 0 40 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr19 7670117 7670117 1 + G A UCEC 7670120 + 7670100 7670140 41 ATGCCCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCC ATGCCCCCACAGAGCACATGCCCCCGGAGCTGTGGGAGCCC < 41bp 1 0.0913073162615721 1 0.0542516708374023 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670120 chr19:7670117 nonsynonymous SNV 0.994 4 18 hm5C_associated_SNPs_45419 0 0 4 BUD13 POSTAR2 ENCODE chr19:7670084-7670120
64251 chr19 7670117 7670117 1 + G A UCEC 7670124 + 7670104 7670144 41 CCCCACAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCT CCCCACAGAGCACATGCCCCCGGAGCTGTGGGAGCCCTTCT < 41bp 1 0.51305905229605 1 0.805420994758606 experiment 0.973881895407901 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7670124 chr19:7670117 nonsynonymous SNV 0.994 4 14 hm5C_associated_SNPs_45420 0 0 4 BUD13 POSTAR2 ENCODE chr19:7670084-7670120
64251 chr9 139975208 139975208 1 + G A UCEC 139975202 + 139975182 139975222 41 CCCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCC CCCCACTGAAGAACGCAGAGCCAGCCAACAGGGACAGTCCC < 41bp 1 0.0776768220458173 1 0.680422902107239 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975202 chr9:139975208 nonsynonymous SNV 0.032 0 27 hm5C_associated_SNPs_45421 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr9 139975208 139975208 1 + G A UCEC 139975203 + 139975183 139975223 41 CCCACTGAAGAACGCAGAGCCAGCCGACAGGGACAGTCCCC CCCACTGAAGAACGCAGAGCCAGCCAACAGGGACAGTCCCC < 41bp 1 0.30252608559624 1 0.43056446313858 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139975203 chr9:139975208 nonsynonymous SNV 0.032 0 26 hm5C_associated_SNPs_45422 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139975175-139975211
64251 chr2 109347859 109347859 1 + G A UCEC 109347873 + 109347853 109347893 41 ACTGATGGAAGAGCAAAATACTGGCTTGAAAGAGCAGCCAA ACTGATAGAAGAGCAAAATACTGGCTTGAAAGAGCAGCCAA < 41bp 1 0.696940297710583 1 0.317403644323349 experiment 0.606119404578833 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347873 chr2:109347859 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_45424 0 0 3 LIN28B POSTAR2 ENCODE chr2:109347853-109347880
64251 chr19 52195899 52195899 1 + T C UCEC 52195882 + 52195862 52195902 41 CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGC CCTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTCCGC < 41bp 1 0.331826404003869 1 0.109522998332977 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195882 chr19:52195899 . . 0 38 hm5C_associated_SNPs_45426 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195899 52195899 1 + T C UCEC 52195883 + 52195863 52195903 41 CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCC CTGGCACCCACCCGTAGAACCGACCTTGCGGGGCCTCCGCC < 41bp 1 0.467153937680684 1 0.340311229228973 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195883 chr19:52195899 . . 0 37 hm5C_associated_SNPs_45427 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195899 52195899 1 + T C UCEC 52195886 + 52195866 52195906 41 GCACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCA GCACCCACCCGTAGAACCGACCTTGCGGGGCCTCCGCCGCA < 41bp 1 0.106606800140814 1 0.017713874578476 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195886 chr19:52195899 . . 0 34 hm5C_associated_SNPs_45428 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr19 52195899 52195899 1 + T C UCEC 52195887 + 52195867 52195907 41 CACCCACCCGTAGAACCGACCTTGCGGGGCCTTCGCCGCAC CACCCACCCGTAGAACCGACCTTGCGGGGCCTCCGCCGCAC < 41bp 1 0.382349437920539 1 0.0753376185894012 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR99B;SPACA6P-AS ENSG00000207550;ENSG00000269959 ncRNA_exonic Human other chr19:52195887 chr19:52195899 . . 0 33 hm5C_associated_SNPs_45429 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52195893-52195928
64251 chr12 56075819 56075819 1 + T C UCEC 56075823 + 56075803 56075843 41 CCACCGGGCTGCAGGGTCACCTGCCTAGACCCAAATCCCCA CCACCGGGCTGCAGGGCCACCTGCCTAGACCCAAATCCCCA < 41bp 1 0.414186431743438 1 0.11913588643074 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075823 chr12:56075819 nonsynonymous SNV 0.995 3 17 hm5C_associated_SNPs_45431 0 0 2 RPS3 POSTAR2 ENCODE chr12:56075778-56075831
64251 chr5 176868828 176868828 1 + G A UCEC 176868832 + 176868812 176868852 41 CCAGCAGTTGGCGGTAGCAGCTACTCCGAGCGCCGTTTACA CCAGCAGTTGGCGGTAACAGCTACTCCGAGCGCCGTTTACA < 41bp 1 0.281919958810214 1 0.080486923456192 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GRK6 ENSG00000198055 CDS Human protein_coding chr5:176868832 chr5:176868828 synonymous SNV . 0 17 hm5C_associated_SNPs_45432 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176868816-176868839
64251 chrX 133547558 133547558 1 + G T UCEC 133547561 + 133547541 133547581 41 AATGAACATGAACTGGAGCCCTCATCACCTAAAAGTAAAAA AATGAACATGAACTGGATCCCTCATCACCTAAAAGTAAAAA < 41bp 1 0.215250403726068 1 0.132240176200867 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133547561 chrX:133547558 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_45433 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:133547544-133547575
64251 chr1 62905603 62905603 1 + G T UCEC 62905591 + 62905571 62905611 41 ACTTTCAAGAGGTAGCCCTTCAAAGAAAAACAGACTTTCCT ACTTTCAAGAGGTAGCCCTTCAAAGAAAAACATACTTTCCT < 41bp 1 0.469508316098381 1 0.277870714664459 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient USP1 ENSG00000162607 CDS Human protein_coding chr1:62905591 chr1:62905603 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_45434 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:62905476-62905603
64251 chr6 44218112 44218112 1 + G T UCEC 44218121 + 44218101 44218141 41 ATAAAGATGATGAAGAAAAACCCAAGATCGAAGATGTGGGT ATAAAGATGATTAAGAAAAACCCAAGATCGAAGATGTGGGT < 41bp 1 0.473931419888377 1 0.173278719186783 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44218121 chr6:44218112 stopgain 0.959 0 12 hm5C_associated_SNPs_45435 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44218028-44218116
64251 chr18 77895410 77895410 1 + C T UCEC 77895411 + 77895391 77895431 41 TGCAACGAGCTCTTTCCGTCCAACGTCTACCAGGTCCACAT TGCAACGAGCTCTTTCCGTTCAACGTCTACCAGGTCCACAT < 41bp 1 0.53527095489714 1 0.336136400699615 experiment 0.929458090205721 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895411 chr18:77895410 nonsynonymous SNV 0.808 4 20 hm5C_associated_SNPs_45437 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:77895383-77895414
64251 chr2 120125830 120125830 1 + C T UCEC 120125835 + 120125815 120125855 41 TCGGATGAGGAGATGCTGTTCATCTATGGCCACTACAAACA TCGGATGAGGAGATGTTGTTCATCTATGGCCACTACAAACA < 41bp 1 0.291760721279525 1 0.0611684024333954 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DBI ENSG00000155368 CDS Human protein_coding chr2:120125835 chr2:120125830 synonymous SNV . 0 16 hm5C_associated_SNPs_45438 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:120125760-120125840
64251 chr2 113277946 113277946 1 + C T UCEC 113277937 + 113277917 113277957 41 TTCCAGCTCTTCGGCTTTGACTTCATGGTCGATGAGGAGCT TTCCAGCTCTTCGGCTTTGACTTCATGGTTGATGAGGAGCT < 41bp 1 0.75202587791663 1 0.761254131793976 experiment 0.49594824416674 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTL ENSG00000114999 CDS Human protein_coding chr2:113277937 chr2:113277946 synonymous SNV . 0 30 hm5C_associated_SNPs_45439 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113277930-113277960
64251 chr1 151020384 151020384 1 + G A UCEC 151020375 + 151020355 151020395 41 TCCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAA TCCTGCTGCTGAATCTGGGTCCCCGGGCGACGGGGGCCCAA < 41bp 1 0.614432164293755 1 0.123375475406647 experiment 0.77113567141249 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020375 chr1:151020384 nonsynonymous SNV 0.992 3 30 hm5C_associated_SNPs_45441 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020383-151020384
64251 chr1 151020384 151020384 1 + G A UCEC 151020376 + 151020356 151020396 41 CCTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAG CCTGCTGCTGAATCTGGGTCCCCGGGCGACGGGGGCCCAAG < 41bp 1 0.745481403907963 1 0.751243829727173 experiment 0.509037192184073 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020376 chr1:151020384 nonsynonymous SNV 0.992 3 29 hm5C_associated_SNPs_45442 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020383-151020384
64251 chr1 151020384 151020384 1 + G A UCEC 151020377 + 151020357 151020397 41 CTGCTGCTGAATCTGGGTCCCCGGGCGGCGGGGGCCCAAGG CTGCTGCTGAATCTGGGTCCCCGGGCGACGGGGGCCCAAGG < 41bp 1 0.770988162865784 1 0.702553033828735 experiment 0.458023674268431 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020377 chr1:151020384 nonsynonymous SNV 0.992 3 28 hm5C_associated_SNPs_45443 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020383-151020384
64251 chr1 151020384 151020384 1 + G A UCEC 151020391 + 151020371 151020411 41 GGGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTC GGGTCCCCGGGCGACGGGGGCCCAAGGCCTGACCCAGACTC < 41bp 1 0.600767893971416 1 0.398347228765488 experiment 0.798464212057168 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020391 chr1:151020384 nonsynonymous SNV 0.992 3 14 hm5C_associated_SNPs_45444 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020383-151020384
64251 chr1 151020384 151020384 1 + G A UCEC 151020392 + 151020372 151020412 41 GGTCCCCGGGCGGCGGGGGCCCAAGGCCTGACCCAGACTCC GGTCCCCGGGCGACGGGGGCCCAAGGCCTGACCCAGACTCC < 41bp 1 0.446769212276998 1 0.540614306926727 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020392 chr1:151020384 nonsynonymous SNV 0.992 3 13 hm5C_associated_SNPs_45445 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020383-151020384
64251 chr9 131843467 131843467 1 + C G UCEC 131843453 + 131843433 131843473 41 CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACCCACGTC CGCTCCCCGCTTCATGGCGGCCGGTGACCCTCACGCACGTC < 41bp 1 0.314325971217863 1 0.332882195711136 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843453 chr9:131843467 synonymous SNV . 0 35 hm5C_associated_SNPs_45446 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr16 89759814 89759814 1 + G A UCEC 89759823 + 89759803 89759843 41 CAGCGGATTTCGGCCTGGCCCGGGCCTATGGTGTCCCAGTA CAGCGGATTTCAGCCTGGCCCGGGCCTATGGTGTCCCAGTA < 41bp 1 0.569066288647091 1 0.813974380493164 experiment 0.861867422705818 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CDK10 ENSG00000185324 CDS Human protein_coding chr16:89759823 chr16:89759814 nonsynonymous SNV 0.970 5 12 hm5C_associated_SNPs_45447 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89759808-89759841
64251 chr7 43840158 43840158 1 + G A UCEC 43840161 + 43840141 43840181 41 GACCTGCTGAAAGGGTCGCTCCTCTTCACAGGTCAGTGCTA GACCTGCTGAAAGGGTCACTCCTCTTCACAGGTCAGTGCTA < 41bp 1 0.162213202449903 1 0.0747706592082977 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control BLVRA ENSG00000106605 CDS Human protein_coding chr7:43840161 chr7:43840158 synonymous SNV . 0 18 hm5C_associated_SNPs_45448 0 0 1 DGCR8 POSTAR2 ENCODE chr7:43840121-43840164
64251 chr12 109547688 109547688 1 + G A UCEC 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAAGG < 41bp 1 0.0395622226411546 1 0.0294241905212402 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547688 nonsynonymous SNV 0.993 4 39 hm5C_associated_SNPs_45449 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr15 57545636 57545636 1 + C T UCEC 57545632 + 57545612 57545652 41 CAATTCAAACTATGGAGGATCAAGCCTTGTTGCAAGCAGTC CAATTCAAACTATGGAGGATCAAGTCTTGTTGCAAGCAGTC < 41bp 1 0.275921523651633 1 0.228035926818848 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545632 chr15:57545636 synonymous SNV . 0 25 hm5C_associated_SNPs_45450 0 0 2 IGF2BP1 POSTAR2 ENCODE chr15:57545594-57545642
64251 chr6 72003267 72003267 1 + T C UCEC 72003257 + 72003237 72003277 41 ACTTCAAAGATATCCGATATCAAAATGACTTGAGCAATCTT ACTTCAAAGATATCCGATATCAAAATGACTCGAGCAATCTT < 41bp 1 0.706967345170474 1 0.275700628757477 experiment 0.586065309659052 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003257 chr6:72003267 nonsynonymous SNV 0.999 2 31 hm5C_associated_SNPs_45453 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:72003235-72003272
64251 chr7 36438899 36438899 1 + A T UCEC 36438880 + 36438860 36438900 41 TTCTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAG TTCTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGTG < 41bp 1 0.649919433443042 1 0.269535660743713 experiment 0.700161133113915 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438880 chr7:36438899 nonsynonymous SNV 0.730 0 40 hm5C_associated_SNPs_45454 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36438855-36438926
64251 chr7 36438899 36438899 1 + A T UCEC 36438882 + 36438862 36438902 41 CTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGAGGG CTGTTGCTGTCCCGGCATCACTGCTGGGCATGAGGAGTGGG < 41bp 1 0.763125700423981 1 0.181654006242752 experiment 0.473748599152037 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438882 chr7:36438899 nonsynonymous SNV 0.730 0 38 hm5C_associated_SNPs_45455 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36438855-36438926
64251 chr7 36438899 36438899 1 + A T UCEC 36438890 + 36438870 36438910 41 GTCCCGGCATCACTGCTGGGCATGAGGAGAGGGCTGAACTC GTCCCGGCATCACTGCTGGGCATGAGGAGTGGGCTGAACTC < 41bp 1 0.771169224194764 1 0.345249950885773 experiment 0.457661551610473 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36438890 chr7:36438899 nonsynonymous SNV 0.730 0 30 hm5C_associated_SNPs_45456 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36438855-36438926
64251 chr18 19371509 19371509 1 + G A UCEC 19371516 + 19371496 19371536 41 AATGGGCTGAAGCGATGCTTCCAGTAAGTATGTTTAGAATA AATGGGCTGAAGCAATGCTTCCAGTAAGTATGTTTAGAATA < 41bp 1 0.196938913594992 1 0.0458164513111115 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19371516 chr18:19371509 synonymous SNV . 0 14 hm5C_associated_SNPs_45457 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:19371480-19371514
64251 chr11 35201889 35201889 1 + A G UCEC 35201875 + 35201855 35201895 41 CGGATCCACCCCAACTCCATCTGTGCAGCAAACAACACAGG CGGATCCACCCCAACTCCATCTGTGCAGCAAACAGCACAGG < 41bp 1 0.380826207072202 1 0.381331831216812 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35201875 chr11:35201889 nonsynonymous SNV 0.404 0 35 hm5C_associated_SNPs_45458 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35201880-35201900
64251 chr11 35201889 35201889 1 + A G UCEC 35201902 + 35201882 35201922 41 GCAAACAACACAGGGGTGTACATCCTCACATCCAACACCTC GCAAACAGCACAGGGGTGTACATCCTCACATCCAACACCTC < 41bp 1 0.191673292818273 1 0.117801874876022 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CD44 ENSG00000026508 CDS Human protein_coding chr11:35201902 chr11:35201889 nonsynonymous SNV 0.404 0 8 hm5C_associated_SNPs_45459 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35201880-35201900
64251 chr2 223782840 223782840 1 + T C UCEC 223782831 + 223782811 223782851 41 TTAAATGAAACAGAGGTGACCAACATCATTACTAGTAAAGA TTAAATGAAACAGAGGTGACCAACATCATCACTAGTAAAGA < 41bp 1 0.540070639531444 1 0.209888935089111 experiment 0.919858720937112 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ACSL3 ENSG00000123983 CDS Human protein_coding chr2:223782831 chr2:223782840 synonymous SNV . 0 30 hm5C_associated_SNPs_45461 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:223782809-223782862
64251 chr4 110442771 110442771 1 + T C UCEC 110442772 + 110442752 110442792 41 AGAAGATCCTAATCAGAGATCAAGTACAAAGGTATTTTATG AGAAGATCCTAATCAGAGACCAAGTACAAAGGTATTTTATG < 41bp 1 0.18368335490886 1 0.595999538898468 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SEC24B ENSG00000138802 CDS Human protein_coding chr4:110442772 chr4:110442771 nonsynonymous SNV 0.993 3 20 hm5C_associated_SNPs_45462 0 0 1 DDX24 POSTAR2 ENCODE chr4:110442728-110442774
64251 chr11 606584 606584 1 + G A UCEC 606594 + 606574 606614 41 CTCCCTCAGCGCCAAGAGGGCGGGTGAGTGCCTTCCCTGCC CTCCCTCAGCACCAAGAGGGCGGGTGAGTGCCTTCCCTGCC < 41bp 1 0.742322664679189 1 0.843859851360321 experiment 0.515354670641623 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PHRF1 ENSG00000070047 CDS Human protein_coding chr11:606594 chr11:606584 nonsynonymous SNV 0.978 5 11 hm5C_associated_SNPs_45464 0 0 2 AARS POSTAR2 ENCODE chr11:606562-606598
64251 chr11 17316969 17316969 1 + A G UCEC 17316973 + 17316953 17316993 41 ACATAGACAAGACAAAAGTACAAAATATTCACCCTGTGGAA ACATAGACAAGACAAAGGTACAAAATATTCACCCTGTGGAA < 41bp 1 0.607920939533556 1 0.0914878845214844 experiment 0.784158120932888 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17316973 chr11:17316969 synonymous SNV . 0 17 hm5C_associated_SNPs_45465 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr11:17316960-17316997
64251 chr20 31024481 31024481 1 + G A UCEC 31024479 + 31024459 31024499 41 AGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAG AGCGCCCCAGGCCTGCGGACCCAATGCCTCTTCCTGCTGAG < 41bp 1 0.0678904080394744 1 0.0849089324474335 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024479 chr20:31024481 synonymous SNV . 0 23 hm5C_associated_SNPs_45466 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:31024458-31024492
64251 chr6 33169569 33169569 1 + C A UCEC 33169566 + 33169546 33169586 41 TCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGA TCAGCAGCTCCATTTTTTGTCCTATTCCTTATCCCCGTGGA < 41bp 1 0.115368263686947 1 0.0451162755489349 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169566 chr6:33169569 synonymous SNV . 0 24 hm5C_associated_SNPs_45467 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr2 233681722 233681722 1 + G T UCEC 233681725 + 233681705 233681745 41 AAAGGCGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTA AAAGGCGAGAGGAAGAATAACTTGCCCGAAGGAAACAGGTA < 41bp 1 0.176835590990827 1 0.195548444986343 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681725 chr2:233681722 stopgain 0.998 1 18 hm5C_associated_SNPs_45472 0 0 17 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr2 233681722 233681722 1 + G T UCEC 233681730 + 233681710 233681750 41 CGAGAGGAAGAAGAACTTGCCCGAAGGAAACAGGTATGTAT CGAGAGGAAGAATAACTTGCCCGAAGGAAACAGGTATGTAT < 41bp 1 0.408159133523024 1 0.38801172375679 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233681730 chr2:233681722 stopgain 0.998 1 13 hm5C_associated_SNPs_45473 0 0 17 AGGF1 POSTAR2 ENCODE chr2:233681715-233681760
64251 chr22 20079083 20079083 1 + T C UCEC 20079093 + 20079073 20079113 41 GCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGA GCAGGCGGAGCCCGAGAGGCCCATCTTGCCAGCCAATCAGA < 41bp 1 0.0585229634730683 1 0.135323762893677 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DGCR8 ENSG00000128191 CDS Human protein_coding chr22:20079093 chr22:20079083 nonsynonymous SNV 0.937 2 11 hm5C_associated_SNPs_45474 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:20079080-20079100
64251 chr11 69462879 69462879 1 + G A UCEC 69462886 + 69462866 69462906 41 TACCGCCTCACACGCTTCCTCTCCAGAGTGATCAAGTGTGA TACCGCCTCACACACTTCCTCTCCAGAGTGATCAAGTGTGA < 41bp 1 0.786041245948539 1 0.394859224557877 experiment 0.427917508102923 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCND1 ENSG00000110092 CDS Human protein_coding chr11:69462886 chr11:69462879 nonsynonymous SNV 0.343 0 14 hm5C_associated_SNPs_45475 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:69462853-69462887
64251 chr15 99673042 99673042 1 + G A UCEC 99673023 + 99673003 99673043 41 GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACGC GGAGCTCTCGGTGTGTCTGACCGTGGTTCCTGGAGAGACAC < 41bp 1 0.258047575591513 1 0.0567341148853302 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99673023 chr15:99673042 nonsynonymous SNV 0.007 0 40 hm5C_associated_SNPs_45479 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:99673037-99673064
64251 chr1 44069434 44069434 1 + G A UCEC 44069418 + 44069398 44069438 41 CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCGGCAA CGGGCCGACGAGGCGCGGCCCAACACCATAGATTTCAGCAA < 41bp 1 0.372925878460937 1 0.070190042257309 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control PTPRF ENSG00000142949 CDS Human protein_coding chr1:44069418 chr1:44069434 nonsynonymous SNV 0.997 1 37 hm5C_associated_SNPs_45480 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:44069421-44069438
64251 chr17 57725629 57725629 1 + T C UCEC 57725620 + 57725600 57725640 41 GCAAAATCGTGTGGTGGGAGCTATGCAGCTATATTCTGTAG GCAAAATCGTGTGGTGGGAGCTATGCAGCCATATTCTGTAG < 41bp 1 0.250181529503234 1 0.106591522693634 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CLTC ENSG00000141367 CDS Human protein_coding chr17:57725620 chr17:57725629 nonsynonymous SNV 0.998 4 30 hm5C_associated_SNPs_45481 0 0 16 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:57725620-57725640
64251 chr2 15747322 15747322 1 + A G UCEC 15747340 + 15747320 15747360 41 CAAAGTTTCTCCCCAATGCTCCGAAAGCTCTCATTGTTGAA CAGAGTTTCTCCCCAATGCTCCGAAAGCTCTCATTGTTGAA < 41bp 1 0.449639919452969 1 0.0872959196567535 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15747340 chr2:15747322 nonsynonymous SNV 0.999 2 3 hm5C_associated_SNPs_45482 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:15747298-15747334
64251 chr5 139906570 139906570 1 + G T UCEC 139906560 + 139906540 139906580 41 CTTGTCAACCAGCTACAAGACAGTGTCATTGCCATTAAGCT CTTGTCAACCAGCTACAAGACAGTGTCATTTCCATTAAGCT < 41bp 1 0.158803246165427 1 0.132165998220444 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139906560 chr5:139906570 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_45484 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:139906533-139906573
64251 chr1 109811560 109811560 1 + C T UCEC 109811544 + 109811524 109811564 41 CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGG CAAAGGGAACTTTGCTGGGGCCAAGCTGCCCCGCTATGAGG < 41bp 1 0.0407608970431723 1 0.078225314617157 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811544 chr1:109811560 synonymous SNV . 0 37 hm5C_associated_SNPs_45485 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811560 109811560 1 + C T UCEC 109811552 + 109811532 109811572 41 ACTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGT ACTTTGCTGGGGCCAAGCTGCCCCGCTATGAGGCCCTGCGT < 41bp 1 0.210524186506988 1 0.0685094892978668 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811552 chr1:109811560 synonymous SNV . 0 29 hm5C_associated_SNPs_45486 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811560 109811560 1 + C T UCEC 109811553 + 109811533 109811573 41 CTTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTG CTTTGCTGGGGCCAAGCTGCCCCGCTATGAGGCCCTGCGTG < 41bp 1 0.238752240492542 1 0.508653223514557 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811553 chr1:109811560 synonymous SNV . 0 28 hm5C_associated_SNPs_45487 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811560 109811560 1 + C T UCEC 109811554 + 109811534 109811574 41 TTTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGG TTTGCTGGGGCCAAGCTGCCCCGCTATGAGGCCCTGCGTGG < 41bp 1 0.182034046268479 1 0.287102490663528 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811554 chr1:109811560 synonymous SNV . 0 27 hm5C_associated_SNPs_45488 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr1 109811560 109811560 1 + C T UCEC 109811555 + 109811535 109811575 41 TTGCTGGGGCCAAGCTGCCCCGCTACGAGGCCCTGCGTGGG TTGCTGGGGCCAAGCTGCCCCGCTATGAGGCCCTGCGTGGG < 41bp 1 0.383911841099132 1 0.830539345741272 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control CELSR2 ENSG00000143126 CDS Human protein_coding chr1:109811555 chr1:109811560 synonymous SNV . 0 26 hm5C_associated_SNPs_45489 0 0 5 FMR1 POSTAR2 ENCODE chr1:109811540-109811584
64251 chr15 99671629 99671629 1 + G A UCEC 99671610 + 99671590 99671630 41 GTGGATGCCGATCGGTTAGACCTGGAGGAGCTGAGCAAAGA GTGGATGCCGATCGGTTAGACCTGGAGGAGCTGAGCAAAAA < 41bp 1 0.193084055777859 1 0.256970942020416 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99671610 chr15:99671629 nonsynonymous SNV 0.432 3 40 hm5C_associated_SNPs_45490 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:99671620-99671640
64251 chr15 99671629 99671629 1 + G A UCEC 99671620 + 99671600 99671640 41 ATCGGTTAGACCTGGAGGAGCTGAGCAAAGATGAGGCCAGT ATCGGTTAGACCTGGAGGAGCTGAGCAAAAATGAGGCCAGT < 41bp 1 0.344524967654915 1 0.277167081832886 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SYNM ENSG00000182253 CDS Human protein_coding chr15:99671620 chr15:99671629 nonsynonymous SNV 0.432 3 30 hm5C_associated_SNPs_45491 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:99671620-99671640
64251 chr7 2695742 2695742 1 + T C UCEC 2695731 + 2695711 2695751 41 GTGCGTGCCCCCCAGGACCCCCTCCTCCGCGTCCAGGAGGT GTGCGTGCCCCCCAGGACCCCCTCCTCCGCGCCCAGGAGGT < 41bp 1 0.0215433197029194 1 0.125098079442978 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2695731 chr7:2695742 nonsynonymous SNV 0.991 2 32 hm5C_associated_SNPs_45492 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:2695741-2695742
64251 chr7 2695742 2695742 1 + T C UCEC 2695734 + 2695714 2695754 41 CGTGCCCCCCAGGACCCCCTCCTCCGCGTCCAGGAGGTGCT CGTGCCCCCCAGGACCCCCTCCTCCGCGCCCAGGAGGTGCT < 41bp 1 0.023534040341271 1 0.239519417285919 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2695734 chr7:2695742 nonsynonymous SNV 0.991 2 29 hm5C_associated_SNPs_45493 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:2695741-2695742
64251 chr16 67315533 67315533 1 + C T UCEC 67315518 + 67315498 67315538 41 TGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGCCTTCC TGCTGCTAGTGGGAAGCACGCTGCTGAAGGAAGTGTCTTCC < 41bp 1 0.478097113542931 1 0.173752993345261 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PLEKHG4 ENSG00000196155 CDS Human protein_coding chr16:67315518 chr16:67315533 nonsynonymous SNV 0.096 2 36 hm5C_associated_SNPs_45494 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67315494-67315552
64251 chr11 33078735 33078735 1 + C T UCEC 33078749 + 33078729 33078769 41 AAGATCCCCCAGCATATGACCATGCTATCAAACTTGTAGGA AAGATCTCCCAGCATATGACCATGCTATCAAACTTGTAGGA < 41bp 1 0.299430627333247 1 0.439190208911896 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33078749 chr11:33078735 nonsynonymous SNV 0.955 4 7 hm5C_associated_SNPs_45495 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:33078718-33078741
64251 chr11 71209473 71209473 1 + T C UCEC 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GCGCACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT < 41bp 1 0.190558388180611 1 0.326978027820587 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209473 nonsynonymous SNV 0.073 4 4 hm5C_associated_SNPs_45496 0 0 2 DDX24 POSTAR2 ENCODE chr11:71209397-71209479
64251 chr12 109547663 109547663 1 + T C UCEC 109547670 + 109547650 109547690 41 TACAGACGGCTCATCCCTCCCCTTTGTCAGTGTATAGAGGG TACAGACGGCTCACCCCTCCCCTTTGTCAGTGTATAGAGGG < 41bp 1 0.044882532600847 1 0.0436437726020813 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UNG ENSG00000076248 CDS Human protein_coding chr12:109547670 chr12:109547663 synonymous SNV . 0 14 hm5C_associated_SNPs_45497 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109547619-109547823
64251 chr9 131010990 131010990 1 + G T UCEC 131010994 + 131010974 131011014 41 TCAACAAGACCGTGAGGGACCTCATGCCCAAGACCATCATG TCAACAAGACCGTGAGTGACCTCATGCCCAAGACCATCATG < 41bp 1 0.472142104616099 1 0.155211210250854 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DNM1 ENSG00000106976 CDS Human protein_coding chr9:131010994 chr9:131010990 nonsynonymous SNV 0.988 4 17 hm5C_associated_SNPs_45498 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr15 22969317 22969317 1 + A G UCEC 22969313 + 22969293 22969333 41 CCCTGCACGTCTTCTGGGAGCTCAACTATGACTTCCTGCCC CCCTGCACGTCTTCTGGGAGCTCAGCTATGACTTCCTGCCC < 41bp 1 0.49682068583817 1 0.0721945762634277 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22969313 chr15:22969317 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_45499 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr15:22969289-22969328
64251 chrX 73047062 73047062 1 - C A UCEC 73047047 - 73047027 73047067 41 TCAGAGCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC TCAGATCAAGCATTGTGGAGCGGTTCCTTATGCCAGGCTGC < 41bp 1 0.0926678293024499 1 0.0814279913902283 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047047 chrX:73047062 . . 0 6 hm5C_associated_SNPs_45500 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chrX 73047062 73047062 1 - C A UCEC 73047076 - 73047056 73047096 41 CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGAGCAAGCA CCTGCCTGATAGGTGCAGAACGTCGGCTATCAGATCAAGCA < 41bp 1 0.296743049347251 1 0.118366181850433 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73047076 chrX:73047062 . . 0 35 hm5C_associated_SNPs_45501 0 0 80 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:73047057-73047078
64251 chr10 17275846 17275846 1 + G A UCEC 17275853 + 17275833 17275873 41 AGCCTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAA AGCCTGACCTCACAGCTGCCCTGCGTGACGTACGTCAGCAA < 41bp 1 0.587968385372365 1 0.752772450447083 experiment 0.824063229255271 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275853 chr10:17275846 synonymous SNV . 0 14 hm5C_associated_SNPs_45502 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr10 17275846 17275846 1 + G A UCEC 17275856 + 17275836 17275876 41 CTGACCTCACGGCTGCCCTGCGTGACGTACGTCAGCAATAT CTGACCTCACAGCTGCCCTGCGTGACGTACGTCAGCAATAT < 41bp 1 0.377014828985366 1 0.131976336240768 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275856 chr10:17275846 synonymous SNV . 0 11 hm5C_associated_SNPs_45503 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr10 17275846 17275846 1 + G A UCEC 17275861 + 17275841 17275881 41 CTCACGGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG CTCACAGCTGCCCTGCGTGACGTACGTCAGCAATATGAAAG < 41bp 1 0.113726291042147 1 0.0312120318412781 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control VIM ENSG00000026025 CDS Human protein_coding chr10:17275861 chr10:17275846 synonymous SNV . 0 6 hm5C_associated_SNPs_45504 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:17275826-17275850
64251 chr7 101837158 101837158 1 + C T UCEC 101837147 + 101837127 101837167 41 TGAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACA TGAAGTCCATGGAGTTTGCACCGTCCGAGGGTGCTGGGACA < 41bp 1 0.0215941579869932 1 0.248377650976181 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837147 chr7:101837158 synonymous SNV . 0 32 hm5C_associated_SNPs_45505 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 101837158 101837158 1 + C T UCEC 101837148 + 101837128 101837168 41 GAAGTCCATGGAGTTTGCACCGTCCGAGGGCGCTGGGACAC GAAGTCCATGGAGTTTGCACCGTCCGAGGGTGCTGGGACAC < 41bp 1 0.067721448764793 1 0.338296383619308 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101837148 chr7:101837158 synonymous SNV . 0 31 hm5C_associated_SNPs_45506 0 0 9 BUD13 POSTAR2 ENCODE chr7:101837117-101837192
64251 chr7 27833983 27833983 1 + G A UCEC 27833973 + 27833953 27833993 41 TAATGTCTTCACAAAGAAAACGGGGAATCAGCAGAAAGTGA TAATGTCTTCACAAAGAAAACGGGGAATCAACAGAAAGTGA < 41bp 1 0.757433629224423 1 0.594540894031525 experiment 0.485132741551153 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27833973 chr7:27833983 synonymous SNV . 0 31 hm5C_associated_SNPs_45508 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27833950-27833986
64251 chr11 120957754 120957754 1 + C A UCEC 120957753 + 120957733 120957773 41 CAGCTCTCGGGCATTGCATTCCTTTGGCATTAGGGATGGAG CAGCTCTCGGGCATTGCATTCATTTGGCATTAGGGATGGAG < 41bp 1 0.0812974248890857 1 0.0635031163692474 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TBCEL ENSG00000154114 CDS Human protein_coding chr11:120957753 chr11:120957754 synonymous SNV . 0 22 hm5C_associated_SNPs_45509 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:120957733-120957760
64251 chr1 183519949 183519949 1 + C A UCEC 183519963 + 183519943 183519983 41 GCTCTCCTCCAACACACAACCATAATTCTGTTCCATTCTCC GCTCTCATCCAACACACAACCATAATTCTGTTCCATTCTCC < 41bp 1 0.413469040178673 1 0.119739234447479 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SMG7 ENSG00000116698 CDS Human protein_coding chr1:183519963 chr1:183519949 nonsynonymous SNV 0.999 4 7 hm5C_associated_SNPs_45512 0 0 18 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:183519885-183520007
64251 chr5 167913517 167913517 1 + T C UCEC 167913509 + 167913489 167913529 41 GACGCTGATGGGAGGATGGACGTACTGGTGTCTGAGTGCTC GACGCTGATGGGAGGATGGACGTACTGGCGTCTGAGTGCTC < 41bp 1 0.284710151544081 1 0.133242458105087 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RARS ENSG00000113643 CDS Human protein_coding chr5:167913509 chr5:167913517 nonsynonymous SNV 0.589 1 29 hm5C_associated_SNPs_45513 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:167913485-167913522
64251 chr1 43911916 43911916 1 + G A UCEC 43911903 + 43911883 43911923 41 CAGCGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGC CAGCGGGCACTGCCTGGGGGCATCATCCTCATGAAACTGGC < 41bp 1 0.0908850782575728 1 0.113065212965012 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SZT2 ENSG00000198198 CDS Human protein_coding chr1:43911903 chr1:43911916 nonsynonymous SNV 0.991 4 34 hm5C_associated_SNPs_45514 0 0 1 PRPF8 POSTAR2 ENCODE chr1:43911911-43911965
64251 chr1 43911916 43911916 1 + G A UCEC 43911906 + 43911886 43911926 41 CGGGCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATT CGGGCACTGCCTGGGGGCATCATCCTCATGAAACTGGCATT < 41bp 1 0.0536336142586362 1 0.108226090669632 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SZT2 ENSG00000198198 CDS Human protein_coding chr1:43911906 chr1:43911916 nonsynonymous SNV 0.991 4 31 hm5C_associated_SNPs_45515 0 0 1 PRPF8 POSTAR2 ENCODE chr1:43911911-43911965
64251 chr1 43911916 43911916 1 + G A UCEC 43911909 + 43911889 43911929 41 GCACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCA GCACTGCCTGGGGGCATCATCCTCATGAAACTGGCATTCCA < 41bp 1 0.194551367509261 1 0.104591846466064 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SZT2 ENSG00000198198 CDS Human protein_coding chr1:43911909 chr1:43911916 nonsynonymous SNV 0.991 4 28 hm5C_associated_SNPs_45516 0 0 1 PRPF8 POSTAR2 ENCODE chr1:43911911-43911965
64251 chr1 43911916 43911916 1 + G A UCEC 43911910 + 43911890 43911930 41 CACTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAG CACTGCCTGGGGGCATCATCCTCATGAAACTGGCATTCCAG < 41bp 1 0.245400439962834 1 0.337716966867447 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SZT2 ENSG00000198198 CDS Human protein_coding chr1:43911910 chr1:43911916 nonsynonymous SNV 0.991 4 27 hm5C_associated_SNPs_45517 0 0 1 PRPF8 POSTAR2 ENCODE chr1:43911911-43911965
64251 chr1 43911916 43911916 1 + G A UCEC 43911912 + 43911892 43911932 41 CTGCCTGGGGGCATCATCCTCATGGAACTGGCATTCCAGGT CTGCCTGGGGGCATCATCCTCATGAAACTGGCATTCCAGGT < 41bp 1 0.378873008542003 1 0.700985312461853 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient SZT2 ENSG00000198198 CDS Human protein_coding chr1:43911912 chr1:43911916 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_45518 0 0 1 PRPF8 POSTAR2 ENCODE chr1:43911911-43911965
64251 chr20 49576169 49576169 1 + G A UCEC 49576184 + 49576164 49576204 41 AAATCGCTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG AAATCACTGCGGGTCTGGGCCCCTCTTACAGTGGCAGCTTG < 41bp 1 0.141767086741918 1 0.104075163602829 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576184 chr20:49576169 nonsynonymous SNV 0.611 1 6 hm5C_associated_SNPs_45519 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:49576162-49576193
64251 chr15 29346717 29346717 1 + C T UCEC 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTATCG < 41bp 1 0.731541519208329 1 0.214654505252838 experiment 0.536916961583343 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346717 synonymous SNV . 0 39 hm5C_associated_SNPs_45520 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr15 29346717 29346717 1 + C T UCEC 29346702 + 29346682 29346722 41 GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCCT GAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTATCGCCT < 41bp 1 0.680786130812126 1 0.589784920215607 experiment 0.638427738375747 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346702 chr15:29346717 synonymous SNV . 0 36 hm5C_associated_SNPs_45521 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr5 175933874 175933874 1 + C T UCEC 175933855 + 175933835 175933875 41 CCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGCC CCCAGGCGAGTGCTGCCCTGCATCCCTTCAGAGGAGTGGTC < 41bp 1 0.116998547360672 1 0.100635349750519 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FAF2 ENSG00000113194 CDS Human protein_coding chr5:175933855 chr5:175933874 nonsynonymous SNV 0.998 1 40 hm5C_associated_SNPs_45522 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:175933851-175933889
64251 chr4 1017643 1017643 1 + C T UCEC 1017627 + 1017607 1017647 41 CGACCGCGCTTCACACAGCCCTCCAAGATGAGGCGCCGGGT CGACCGCGCTTCACACAGCCCTCCAAGATGAGGCGCTGGGT < 41bp 1 0.673183122943949 1 0.938007354736328 experiment 0.653633754112101 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control FGFRL1 ENSG00000127418 CDS Human protein_coding chr4:1017627 chr4:1017643 nonsynonymous SNV 0.995 4 37 hm5C_associated_SNPs_45523 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr4:1017633-1017661
64251 chr19 58797547 58797547 1 + G T UCEC 58797552 + 58797532 58797572 41 TGGGTGGCTGAGAGAGGAACCACCCAGGGCTGCCATCCAGG TGGGTGGCTGAGAGATGAACCACCCAGGGCTGCCATCCAGG < 41bp 1 0.406406817930089 1 0.104569435119629 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58797552 chr19:58797547 stopgain 0.092 0 16 hm5C_associated_SNPs_45524 0 0 4 PPIG POSTAR2 ENCODE chr19:58797479-58797564
64251 chr2 26987227 26987227 1 + A G UCEC 26987239 + 26987219 26987259 41 TGGCCTGGACCAAGTACCAGCTGTTCCTGGCCGGGCTCATG TGGCCTGGGCCAAGTACCAGCTGTTCCTGGCCGGGCTCATG < 41bp 1 0.19383360187873 1 0.200738191604614 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC35F6 ENSG00000213699 CDS Human protein_coding chr2:26987239 chr2:26987227 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_45525 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:26987220-26987240
64251 chr10 75551724 75551724 1 + G A UCEC 75551705 + 75551685 75551725 41 AACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGCTTCCGG AACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGCTTCCAG < 41bp 1 0.43708626736165 1 0.281428456306458 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551705 chr10:75551724 nonsynonymous SNV 1.000 0 40 hm5C_associated_SNPs_45526 0 0 8 GRWD1 POSTAR2 ENCODE chr10:75551711-75551789
64251 chr12 69119559 69119559 1 + T C UCEC 69119560 + 69119540 69119580 41 ATAGTTCAAAAGTTTCTTATCCTGGGAGACATTGATGGTAA ATAGTTCAAAAGTTTCTTACCCTGGGAGACATTGATGGTAA < 41bp 1 0.307239294321563 1 0.473795205354691 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NUP107 ENSG00000111581 CDS Human protein_coding chr12:69119560 chr12:69119559 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_45527 0 0 1 UCHL5 POSTAR2 ENCODE chr12:69119556-69119573
64251 chr6 25983642 25983642 1 + G T UCEC 25983632 + 25983612 25983652 41 GGAAAATGTGCAGAGGGGCACTGGCATGAAGCAAGAGCCTC GGAAAATGTGCAGAGGGGCACTGGCATGAATCAAGAGCCTC < 41bp 1 0.519113866436126 1 0.229247838258743 experiment 0.961772267127749 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983632 chr6:25983642 nonsynonymous SNV 0.008 0 31 hm5C_associated_SNPs_45528 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:25983622-25983683
64251 chr11 111896434 111896434 1 + T C UCEC 111896435 + 111896415 111896455 41 ACTGCTGCAGCTTTTGGGGTCGCCCGGCCGCCGCTATTACA ACTGCTGCAGCTTTTGGGGCCGCCCGGCCGCCGCTATTACA < 41bp 1 0.331245503399115 1 0.128631204366684 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DLAT ENSG00000150768 CDS Human protein_coding chr11:111896435 chr11:111896434 nonsynonymous SNV 0.203 0 20 hm5C_associated_SNPs_45529 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:111896420-111896440
64251 chr22 35726433 35726433 1 + G A UCEC 35726424 + 35726404 35726444 41 ATGAGCAGCTGACAGAGGAGCTGCTCATCGTCAATGACAAT ATGAGCAGCTGACAGAGGAGCTGCTCATCATCAATGACAAT < 41bp 1 0.135943126184217 1 0.0452596843242645 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TOM1 ENSG00000100284 CDS Human protein_coding chr22:35726424 chr22:35726433 nonsynonymous SNV 0.944 0 30 hm5C_associated_SNPs_45530 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:35726418-35726450
64251 chr19 10886498 10886498 1 + A G UCEC 10886497 + 10886477 10886517 41 CAGTTCATCAGCCGGGAGAGCAGCCTCATTCTGGCTGTCAC CAGTTCATCAGCCGGGAGAGCGGCCTCATTCTGGCTGTCAC < 41bp 1 0.267303699099767 1 0.267601728439331 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10886497 chr19:10886498 nonsynonymous SNV 0.943 3 22 hm5C_associated_SNPs_45534 0 0 8 BUD13 POSTAR2 ENCODE chr19:10886478-10886525
64251 chr7 22896288 22896288 1 + A C UCEC 22896268 + 22896248 22896288 41 CTCTAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAA CTCTAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAC < 41bp 1 0.100257130814153 1 0.0554837882518768 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896268 chr7:22896288 . . 0 41 hm5C_associated_SNPs_45535 0 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr7 22896288 22896288 1 + A C UCEC 22896271 + 22896251 22896291 41 TAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAAAGGA TAATCTGATTTTATGTGCTTCTGCTGTGATGGATTAACGGA < 41bp 1 0.451843398994069 1 0.111886590719223 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896271 chr7:22896288 . . 0 38 hm5C_associated_SNPs_45536 0 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr7 22896288 22896288 1 + A C UCEC 22896296 + 22896276 22896316 41 GTGATGGATTAAAGGATTTACCTGAGGCCAAATTGGTATGC GTGATGGATTAACGGATTTACCTGAGGCCAAATTGGTATGC < 41bp 1 0.598607518160813 1 0.0437758266925812 experiment 0.802784963678375 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896296 chr7:22896288 . . 0 13 hm5C_associated_SNPs_45537 0 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr7 22896288 22896288 1 + A C UCEC 22896303 + 22896283 22896323 41 ATTAAAGGATTTACCTGAGGCCAAATTGGTATGCAGGAATT ATTAACGGATTTACCTGAGGCCAAATTGGTATGCAGGAATT < 41bp 1 0.378503322199921 1 0.414163380861282 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SNORD93 ENSG00000221740 ncRNA_exonic Human snoRNA chr7:22896303 chr7:22896288 . . 0 6 hm5C_associated_SNPs_45538 0 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:22896281-22896305
64251 chr4 103500165 103500165 1 + A G UCEC 103500160 + 103500140 103500180 41 CTGGCAGCTTCACAAGGCGCCTGGAACCCGTGGTATCAGAC CTGGCAGCTTCACAAGGCGCCTGGAGCCCGTGGTATCAGAC < 41bp 1 0.693635674863559 1 0.510310292243958 experiment 0.612728650272881 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103500160 chr4:103500165 synonymous SNV . 0 26 hm5C_associated_SNPs_45539 0 0 2 GRWD1 POSTAR2 ENCODE chr4:103500122-103500175
64251 chr20 33033236 33033236 1 + G A UCEC 33033240 + 33033220 33033260 41 AGCTTCAAGGAGCAATGCAGCAGTTTAACCAGAGATTCATT AGCTTCAAGGAGCAATACAGCAGTTTAACCAGAGATTCATT < 41bp 1 0.233071436703963 1 0.219451904296875 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ITCH ENSG00000078747 CDS Human protein_coding chr20:33033240 chr20:33033236 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_45540 0 0 1 ZNF622 POSTAR2 ENCODE chr20:33033140-33033254
64251 chr18 19371515 19371515 1 + T C UCEC 19371516 + 19371496 19371536 41 AATGGGCTGAAGCGATGCTTCCAGTAAGTATGTTTAGAATA AATGGGCTGAAGCGATGCTCCCAGTAAGTATGTTTAGAATA < 41bp 1 0.186737894304327 1 0.0326895713806152 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MIB1 ENSG00000101752 CDS Human protein_coding chr18:19371516 chr18:19371515 synonymous SNV . 0 20 hm5C_associated_SNPs_45541 0 0 3 FXR2 POSTAR2 ENCODE chr18:19371473-19371519
64251 chr13 100920966 100920966 1 + T C UCEC 100920958 + 100920938 100920978 41 TTCAGGTTCTAGGTGATAAACATGGGAATGCTTTATGGCTT TTCAGGTTCTAGGTGATAAACATGGGAACGCTTTATGGCTT < 41bp 1 0.497743775595783 1 0.509622037410736 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCCA ENSG00000175198 CDS Human protein_coding chr13:100920958 chr13:100920966 synonymous SNV . 0 29 hm5C_associated_SNPs_45542 0 0 1 PPIG POSTAR2 ENCODE chr13:100920958-100921038
64251 chr8 17794722 17794722 1 + G T UCEC 17794729 + 17794709 17794749 41 GAAAGTGATAAAAGAGTAACCAATGATATTTCTCCGGAGTC GAAAGTGATAAAATAGTAACCAATGATATTTCTCCGGAGTC < 41bp 1 0.296431344859016 1 0.453016072511673 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PCM1 ENSG00000078674 CDS Human protein_coding chr8:17794729 chr8:17794722 nonsynonymous SNV 0.997 4 14 hm5C_associated_SNPs_45543 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:17794703-17794725
64251 chr11 64118672 64118672 1 + C T UCEC 64118659 + 64118639 64118679 41 AGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCT AGGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGTGGAGCCT < 41bp 1 0.316977952018454 1 0.383491218090057 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118659 chr11:64118672 nonsynonymous SNV 0.000 0 34 hm5C_associated_SNPs_45544 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118672 64118672 1 + C T UCEC 64118660 + 64118640 64118680 41 GGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTC GGGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGTGGAGCCTC < 41bp 1 0.283620230291822 1 0.355224311351776 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118660 chr11:64118672 nonsynonymous SNV 0.000 0 33 hm5C_associated_SNPs_45545 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr11 64118672 64118672 1 + C T UCEC 64118661 + 64118641 64118681 41 GGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGCGGAGCCTCA GGCCCCGCGGGGCTGGGGCCCAAAAAGCGTGTGGAGCCTCA < 41bp 1 0.505354616347329 1 0.667921483516693 experiment 0.989290767305341 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE74772;RNA-BisSeq;HCT116;Control CCDC88B ENSG00000168071 CDS Human protein_coding chr11:64118661 chr11:64118672 nonsynonymous SNV 0.000 0 32 hm5C_associated_SNPs_45546 0 0 1 PRPF8 POSTAR2 ENCODE chr11:64118599-64118680
64251 chr16 675487 675487 1 + G A UCEC 675485 + 675465 675505 41 TGGTCCTTTGACGGCATCGACCGCTGGATCAAGGAGATCGA TGGTCCTTTGACGGCATCGACCACTGGATCAAGGAGATCGA < 41bp 1 0.119303374040112 1 0.0999394357204437 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RAB40C ENSG00000197562 CDS Human protein_coding chr16:675485 chr16:675487 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_45547 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:675472-675491
64251 chr1 161753836 161753836 1 + G T UCEC 161753845 + 161753825 161753865 41 CAAGTTATTCAGTCTCGTCTCCTCGGTCAGTGGACTCTTAT CAAGTTATTCATTCTCGTCTCCTCGGTCAGTGGACTCTTAT < 41bp 1 0.144143056165242 1 0.105536103248596 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF6 ENSG00000118217 CDS Human protein_coding chr1:161753845 chr1:161753836 nonsynonymous SNV 0.982 1 12 hm5C_associated_SNPs_45548 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:161753812-161753845
64251 chr1 39926411 39926411 1 + G T UCEC 39926397 + 39926377 39926417 41 CTCGAGTGATGGATTTCTTCCGGCGCATTGATAAGGACCAG CTCGAGTGATGGATTTCTTCCGGCGCATTGATAATGACCAG < 41bp 1 0.223273294783978 1 0.804598212242126 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39926397 chr1:39926411 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45550 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:39926379-39926432
64251 chr1 171558668 171558668 1 + G T UCEC 171558656 + 171558636 171558676 41 CATGAGCCATGCTCGTTTGCCACATGTAGCCAGGGGTCCTT CATGAGCCATGCTCGTTTGCCACATGTAGCCATGGGTCCTT < 41bp 1 0.373812532839268 1 0.182383209466934 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171558656 chr1:171558668 nonsynonymous SNV . 0 33 hm5C_associated_SNPs_45552 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:171558559-171558733
64251 chr1 151633300 151633300 1 + A G UCEC 151633305 + 151633285 151633325 41 CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC CGAGTAATTGGTGAGGGTGACATCATGCAGGAATTCCTATC < 41bp 1 0.343796737577254 1 0.337820738554001 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX27 ENSG00000143376 CDS Human protein_coding chr1:151633305 chr1:151633300 nonsynonymous SNV 1.000 4 16 hm5C_associated_SNPs_45554 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151633275-151633311
64251 chr6 168363206 168363206 1 + C T UCEC 168363202 + 168363182 168363222 41 GCGAGGCAAGAGGAAGAGCGCCGGCGGCAGGAGGAGGAGCG GCGAGGCAAGAGGAAGAGCGCCGGTGGCAGGAGGAGGAGCG < 41bp 1 0.345457802389927 1 0.617064356803894 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168363202 chr6:168363206 nonsynonymous SNV 0.127 0 25 hm5C_associated_SNPs_45555 0 0 7 FTO POSTAR2 ENCODE chr6:168363151-168363228
64251 chr19 50338791 50338791 1 + A G UCEC 50338810 + 50338790 50338830 41 GATGGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTC GGTGGGGGGACAGCAGGCACCCCCAGGGCTGGGGCCCATTC < 41bp 1 0.707359606007943 1 0.424708157777786 experiment 0.585280787984114 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50338810 chr19:50338791 nonsynonymous SNV 0.984 2 2 hm5C_associated_SNPs_45556 0 0 1 TBRG4 POSTAR2 ENCODE chr19:50338788-50338828
64251 chr1 94964166 94964166 1 + T C UCEC 94964179 + 94964159 94964199 41 TTCGATCTGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC TTCGATCCGGGGCTAATGTTCTAATTTGTGGTCCAAATGGC < 41bp 1 0.497053647298543 1 0.181958705186844 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94964179 chr1:94964166 synonymous SNV . 0 8 hm5C_associated_SNPs_45558 0 0 2 PRPF8 POSTAR2 ENCODE chr1:94964157-94964183
64251 chr13 24242896 24242896 1 + G A UCEC 24242887 + 24242867 24242907 41 CTTCGGATCCCTCACGCAGTCCATCTGTGGCGAGTTTTCAG CTTCGGATCCCTCACGCAGTCCATCTGTGACGAGTTTTCAG < 41bp 1 0.114807286270899 1 0.0905694663524628 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242887 chr13:24242896 nonsynonymous SNV 0.838 4 30 hm5C_associated_SNPs_45559 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr13:24242885-24242907
64251 chr3 49742453 49742453 1 + C T UCEC 49742448 + 49742428 49742468 41 GGCCCTGGCTGTTGGGGGGCCACTGCCCCTGCCCCGGCCCG GGCCCTGGCTGTTGGGGGGCCACTGTCCCTGCCCCGGCCCG < 41bp 1 0.454021359435791 1 0.241435497999191 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742448 chr3:49742453 nonsynonymous SNV 0.969 0 26 hm5C_associated_SNPs_45560 0 0 6 FUS POSTAR2 GSE43308,GSM1060381 chr3:49742440-49742460
64251 chr12 112915711 112915711 1 + T C UCEC 112915716 + 112915696 112915736 41 CAAAAAGAGTTACATTGCCACACAAGGCTGCCTGCAAAACA CAAAAAGAGTTACATCGCCACACAAGGCTGCCTGCAAAACA < 41bp 1 0.523251084806464 1 0.141052097082138 experiment 0.953497830387072 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915716 chr12:112915711 synonymous SNV . 0 16 hm5C_associated_SNPs_45562 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:112915700-112915720
64251 chr6 96976484 96976484 1 + G A UCEC 96976482 + 96976462 96976502 41 GCTCGACATAAAGCACGTATCCGTGGACTATTCAGTGCTAT GCTCGACATAAAGCACGTATCCATGGACTATTCAGTGCTAT < 41bp 1 0.318847876620087 1 0.225613683462143 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UFL1 ENSG00000014123 CDS Human protein_coding chr6:96976482 chr6:96976484 nonsynonymous SNV 0.981 2 23 hm5C_associated_SNPs_45563 0 0 1 RPS3 POSTAR2 ENCODE chr6:96976457-96976509
64251 chr2 233428993 233428993 1 + C T UCEC 233428984 + 233428964 233429004 41 AGTTCTGGAGGTTTTATAGCCACATGGTACGTCCTGGGGAC AGTTCTGGAGGTTTTATAGCCACATGGTATGTCCTGGGGAC < 41bp 1 0.705314822852344 1 0.763994336128235 experiment 0.589370354295311 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control EIF4E2 ENSG00000135930 CDS Human protein_coding chr2:233428984 chr2:233428993 nonsynonymous SNV 0.999 2 30 hm5C_associated_SNPs_45565 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:233428968-233429006
64251 chr10 70525793 70525793 1 + T C UCEC 70525803 + 70525783 70525823 41 TTGAGTGTCCTATTGGACTACAGATTAGAGGATAATAAAGA TTGAGTGTCCCATTGGACTACAGATTAGAGGATAATAAAGA < 41bp 1 0.233912594230355 1 0.276315093040466 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70525803 chr10:70525793 nonsynonymous SNV 0.872 4 11 hm5C_associated_SNPs_45567 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70525699-70525836
64251 chr9 131897104 131897104 1 + G A UCEC 131897102 + 131897082 131897122 41 GCAGCCTTCGCTGCTTTCCTCTGCTGTCTCTGCAAGATTGG GCAGCCTTCGCTGCTTTCCTCTACTGTCTCTGCAAGATTGG < 41bp 1 0.376906134297422 1 0.174069076776505 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPA ENSG00000119383 CDS Human protein_coding chr9:131897102 chr9:131897104 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_45569 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:131897094-131897117
64251 chr19 1912878 1912878 1 + G A UCEC 1912858 + 1912838 1912878 41 CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCG CTGCTCCTTCGCCCCGGCCGCTGCCCCCCAGGCCGTCCGCA < 41bp 1 0.121730116788973 1 0.227779418230057 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912858 chr19:1912878 nonsynonymous SNV 0.001 0 41 hm5C_associated_SNPs_45572 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:1912834-1912878
64251 chr20 2635156 2635156 1 + C T UCEC 2635143 + 2635123 2635163 41 TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGCCGCAATA TACTCTTGGGAGTTGGGGATCCCAAGATTGGTGTCGCAATA < 41bp 1 0.564176668974004 1 0.177801549434662 experiment 0.871646662051992 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635143 chr20:2635156 nonsynonymous SNV 0.988 2 34 hm5C_associated_SNPs_45574 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr20 2635156 2635156 1 + C T UCEC 2635157 + 2635137 2635177 41 GGGGATCCCAAGATTGGTGCCGCAATACAGGAGGAGTTAGG GGGGATCCCAAGATTGGTGTCGCAATACAGGAGGAGTTAGG < 41bp 1 0.642319342325029 1 0.614174604415894 experiment 0.715361315349941 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635157 chr20:2635156 nonsynonymous SNV 0.988 2 20 hm5C_associated_SNPs_45575 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635109-2635171
64251 chr1 6271124 6271124 1 + C T UCEC 6271142 + 6271122 6271162 41 GCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG GCTACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTG < 41bp 1 0.432019626959445 1 0.265682756900787 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF207 ENSG00000158286 CDS Human protein_coding chr1:6271142 chr1:6271124 nonsynonymous SNV 0.864 3 3 hm5C_associated_SNPs_45580 0 0 5 DDX24 POSTAR2 ENCODE chr1:6271086-6271137
64251 chr12 6978336 6978336 1 + G A UCEC 6978340 + 6978320 6978360 41 AAGGCATGTCTTTGGGGAGTCAGATGAGGTTAGTAGCCAAG AAGGCATGTCTTTGGGAAGTCAGATGAGGTTAGTAGCCAAG < 41bp 1 0.470152982430068 1 0.704167068004608 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient TPI1 ENSG00000111669 CDS Human protein_coding chr12:6978340 chr12:6978336 nonsynonymous SNV 1.000 4 17 hm5C_associated_SNPs_45581 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr12:6978320-6978340
64251 chr16 56973820 56973820 1 + G T UCEC 56973818 + 56973798 56973838 41 TTATTTTAGTTTAGCAGCCACTGCTGCATCAGGGGCTTTTG TTATTTTAGTTTAGCAGCCACTTCTGCATCAGGGGCTTTTG < 41bp 1 0.141276816764859 1 0.122068285942078 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56973818 chr16:56973820 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_45582 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:56973800-56973820
64251 chr13 111111172 111111172 1 + C T UCEC 111111171 + 111111151 111111191 41 ACGAAGCTATCAAAGGTCTTCCGGGACTGCCAGGACCCAAG ACGAAGCTATCAAAGGTCTTCTGGGACTGCCAGGACCCAAG < 41bp 1 0.52473526765133 1 0.438805609941483 experiment 0.95052946469734 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111111171 chr13:111111172 nonsynonymous SNV 0.040 4 22 hm5C_associated_SNPs_45588 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955513 chr13:111111162-111111183
64251 chr9 33026979 33026979 1 + G T UCEC 33026973 + 33026953 33026993 41 TTGGAGGAGGAGGAAGGATGCAGAGAGAAAGGAGAGGTAAG TTGGAGGAGGAGGAAGGATGCAGAGATAAAGGAGAGGTAAG < 41bp 1 0.702648180776944 1 0.839997291564941 experiment 0.594703638446112 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DNAJA1 ENSG00000086061 CDS Human protein_coding chr9:33026973 chr9:33026979 stopgain 0.998 1 27 hm5C_associated_SNPs_45589 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714641 chr9:33026934-33026979
64251 chr12 57922979 57922979 1 + C T UCEC 57922978 + 57922958 57922998 41 CCTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG CCTCCCCGGGCCCGCCCTGGCTGTCCTGCCAAAAACAAGAG < 41bp 1 0.168939641184191 1 0.155006855726242 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922978 chr12:57922979 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_45590 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:57922946-57922980
64251 chr2 236403459 236403459 1 + G T UCEC 236403477 + 236403457 236403497 41 CAGAACCAGATCCGGGAGCACGTCATCGCCATCGAAGGTGA CATAACCAGATCCGGGAGCACGTCATCGCCATCGAAGGTGA < 41bp 1 0.424460252379028 1 0.23746919631958 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control AGAP1 ENSG00000157985 CDS Human protein_coding chr2:236403477 chr2:236403459 nonsynonymous SNV 1.000 2 3 hm5C_associated_SNPs_45591 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:236403440-236403460
64251 chr1 100740453 100740453 1 + T G UCEC 100740467 + 100740447 100740487 41 ATAAATTTAACTGAGCGTGGCTGTGTGACTAAGATATATGG ATAAATGTAACTGAGCGTGGCTGTGTGACTAAGATATATGG < 41bp 1 0.266281239723778 1 0.135373175144196 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RTCA ENSG00000137996 CDS Human protein_coding chr1:100740467 chr1:100740453 nonsynonymous SNV 0.979 1 7 hm5C_associated_SNPs_45593 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:100740435-100740476
64251 chr1 161179359 161179359 1 + T G UCEC 161179358 + 161179338 161179378 41 CTTGGGGCCATGACCCCTTTCTTCTGGCTGTTTGAAGAAAG CTTGGGGCCATGACCCCTTTCGTCTGGCTGTTTGAAGAAAG < 41bp 1 0.317160257086913 1 0.321732372045517 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179358 chr1:161179359 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_45595 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161179326-161179363
64251 chrX 73044538 73044538 1 - C T UCEC 73044553 - 73044533 73044573 41 GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAATGT GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCAAATGT < 41bp 1 0.140111564588106 1 0.0311310291290283 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044553 chrX:73044538 . . 0 36 hm5C_associated_SNPs_45596 0 0 58 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044538 73044538 1 - C T UCEC 73044555 - 73044535 73044575 41 GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAAT GTGAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCAAAT < 41bp 1 0.0759810451307282 1 0.0475502610206604 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044555 chrX:73044538 . . 0 38 hm5C_associated_SNPs_45597 0 0 58 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr5 78610211 78610211 1 + G T UCEC 78610216 + 78610196 78610236 41 GTTACAGGTAGAAGAGAAAACTGAAGAGGTGGGAGAAGGAA GTTACAGGTAGAAGATAAAACTGAAGAGGTGGGAGAAGGAA < 41bp 1 0.731490028536913 1 0.306265652179718 experiment 0.537019942926173 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control JMY ENSG00000152409 CDS Human protein_coding chr5:78610216 chr5:78610211 nonsynonymous SNV 0.600 0 16 hm5C_associated_SNPs_45598 0 0 4 GRWD1 POSTAR2 ENCODE chr5:78610173-78610369
64251 chr6 7579525 7579525 1 + C T UCEC 7579519 + 7579499 7579539 41 ATTCCACAGCTGAAAAATACCAAGATCGAAGTTTTGGAAGA ATTCCACAGCTGAAAAATACCAAGATTGAAGTTTTGGAAGA < 41bp 1 0.753422926485943 1 0.479079335927963 experiment 0.493154147028114 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7579519 chr6:7579525 synonymous SNV . 0 27 hm5C_associated_SNPs_45599 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7579513-7579549
64251 chr20 55049793 55049793 1 + T G UCEC 55049773 + 55049753 55049793 41 GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCT GTCATTGAATTTCTCTTGGACAAATCTGCAGAAAAGGCTCG < 41bp 1 0.135736007590217 1 0.189686477184296 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049773 chr20:55049793 nonsynonymous SNV 0.999 0 41 hm5C_associated_SNPs_45600 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55049742-55049808
64251 chrX 100880751 100880751 1 + T C UCEC 100880745 + 100880725 100880765 41 TTCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAAC TTCAGCGGGAAATGAAGAAACCAAACCTCAGGTTCTGAAAC < 41bp 1 0.385756613538357 1 0.0830093920230865 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880745 chrX:100880751 nonsynonymous SNV 1.000 1 27 hm5C_associated_SNPs_45612 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 100880751 100880751 1 + T C UCEC 100880746 + 100880726 100880766 41 TCAGCGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACT TCAGCGGGAAATGAAGAAACCAAACCTCAGGTTCTGAAACT < 41bp 1 0.242395070586319 1 0.256092429161072 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880746 chrX:100880751 nonsynonymous SNV 1.000 1 26 hm5C_associated_SNPs_45613 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 100880751 100880751 1 + T C UCEC 100880750 + 100880730 100880770 41 CGGGAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTT CGGGAAATGAAGAAACCAAACCTCAGGTTCTGAAACTCCTT < 41bp 1 0.317768968136629 1 0.0931900143623352 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880750 chrX:100880751 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_45614 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 100880751 100880751 1 + T C UCEC 100880753 + 100880733 100880773 41 GAAATGAAGAAACCAAACTTCAGGTTCTGAAACTCCTTTTG GAAATGAAGAAACCAAACCTCAGGTTCTGAAACTCCTTTTG < 41bp 1 0.696984290934891 1 0.651769757270813 experiment 0.606031418130218 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880753 chrX:100880751 nonsynonymous SNV 1.000 1 19 hm5C_associated_SNPs_45615 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 100880751 100880751 1 + T C UCEC 100880765 + 100880745 100880785 41 CCAAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAA CCAAACCTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAA < 41bp 1 0.606898114065914 1 0.187953174114227 experiment 0.786203771868173 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880765 chrX:100880751 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_45616 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 100880751 100880751 1 + T C UCEC 100880767 + 100880747 100880787 41 AAACTTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAAAA AAACCTCAGGTTCTGAAACTCCTTTTGAATTTGGCTGAAAA < 41bp 1 0.0388145955181732 1 0.0459762811660767 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880767 chrX:100880751 nonsynonymous SNV 1.000 1 5 hm5C_associated_SNPs_45617 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:100880727-100880761
64251 chrX 149896178 149896178 1 + T C UCEC 149896183 + 149896163 149896203 41 ATTTTATCCTTGATGTTCCCCTTGGAGTGATCAGCAGAGTG ATTTTATCCTTGATGCTCCCCTTGGAGTGATCAGCAGAGTG < 41bp 1 0.300782947754118 1 0.037448912858963 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149896183 chrX:149896178 nonsynonymous SNV 0.994 1 16 hm5C_associated_SNPs_45618 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:149896163-149896196
64251 chr2 71297699 71297699 1 + C T UCEC 71297704 + 71297684 71297724 41 GCAGAAGCAGATGGACTGAGCACAAACCACTGGGTAAAAAC GCAGAAGCAGATGGATTGAGCACAAACCACTGGGTAAAAAC < 41bp 1 0.589988907567841 1 0.21455904841423 experiment 0.820022184864319 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NAGK ENSG00000124357 CDS Human protein_coding chr2:71297704 chr2:71297699 synonymous SNV . 0 16 hm5C_associated_SNPs_45619 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:71297625-71297704
64251 chr9 135929306 135929306 1 + G A UCEC 135929296 + 135929276 135929316 41 ATGCCAAGATTTATCAAGTCCTCGATTTCCGAATCCGTTGT ATGCCAAGATTTATCAAGTCCTCGATTTCCAAATCCGTTGT < 41bp 1 0.790014130436979 1 0.929149508476257 experiment 0.419971739126042 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929296 chr9:135929306 nonsynonymous SNV 1.000 3 31 hm5C_associated_SNPs_45620 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:135929288-135929320
64251 chr2 109347893 109347893 1 + A G UCEC 109347873 + 109347853 109347893 41 ACTGATGGAAGAGCAAAATACTGGCTTGAAAGAGCAGCCAA ACTGATGGAAGAGCAAAATACTGGCTTGAAAGAGCAGCCAG < 41bp 1 0.675467122974801 1 0.267316818237305 experiment 0.649065754050398 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347873 chr2:109347893 nonsynonymous SNV 1.000 0 41 hm5C_associated_SNPs_45622 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347887 + 109347867 109347907 41 AAAATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAA AAAATACTGGCTTGAAAGAGCAGCCAGACTTTTCCCAGGAA < 41bp 1 0.204659481910533 1 0.520636916160583 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347887 chr2:109347893 nonsynonymous SNV 1.000 0 27 hm5C_associated_SNPs_45623 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347890 + 109347870 109347910 41 ATACTGGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTC ATACTGGCTTGAAAGAGCAGCCAGACTTTTCCCAGGAAGTC < 41bp 1 0.173612187508738 1 0.372537910938263 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347890 chr2:109347893 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_45624 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347895 + 109347875 109347915 41 GGCTTGAAAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCA GGCTTGAAAGAGCAGCCAGACTTTTCCCAGGAAGTCCTGCA < 41bp 1 0.0410987527879994 1 0.0383966565132141 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347895 chr2:109347893 nonsynonymous SNV 1.000 0 19 hm5C_associated_SNPs_45625 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347901 + 109347881 109347921 41 AAAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCAATTTAT AAAGAGCAGCCAGACTTTTCCCAGGAAGTCCTGCAATTTAT < 41bp 1 0.313475235705395 1 0.419338285923004 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347901 chr2:109347893 nonsynonymous SNV 1.000 0 13 hm5C_associated_SNPs_45626 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347902 + 109347882 109347922 41 AAGAGCAGCCAAACTTTTCCCAGGAAGTCCTGCAATTTATA AAGAGCAGCCAGACTTTTCCCAGGAAGTCCTGCAATTTATA < 41bp 1 0.675387504012538 1 0.834830820560455 experiment 0.649224991974924 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347902 chr2:109347893 nonsynonymous SNV 1.000 0 12 hm5C_associated_SNPs_45627 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347910 + 109347890 109347930 41 CCAAACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAG CCAGACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAG < 41bp 1 0.0469248034494856 1 0.163049012422562 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347910 chr2:109347893 nonsynonymous SNV 1.000 0 4 hm5C_associated_SNPs_45628 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr2 109347893 109347893 1 + A G UCEC 109347911 + 109347891 109347931 41 CAAACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAGG CAGACTTTTCCCAGGAAGTCCTGCAATTTATAAACTAAAGG < 41bp 1 0.302294654947763 1 0.240668565034866 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109347911 chr2:109347893 nonsynonymous SNV 1.000 0 3 hm5C_associated_SNPs_45629 0 0 6 LIN28A POSTAR2 GSE39873,GSM980593 chr2:109347873-109347894
64251 chr1 198222179 198222179 1 + C A UCEC 198222182 + 198222162 198222202 41 AATTACAGAAGGCCTTACGACCGGATATGGGCTATAATACA AATTACAGAAGGCCTTAAGACCGGATATGGGCTATAATACA < 41bp 1 0.670548567343045 1 0.645240187644958 experiment 0.65890286531391 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEK7 ENSG00000151414 CDS Human protein_coding chr1:198222182 chr1:198222179 synonymous SNV . 0 18 hm5C_associated_SNPs_45630 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:198222167-198222201
64251 chr1 198222179 198222179 1 + C A UCEC 198222183 + 198222163 198222203 41 ATTACAGAAGGCCTTACGACCGGATATGGGCTATAATACAT ATTACAGAAGGCCTTAAGACCGGATATGGGCTATAATACAT < 41bp 1 0.466894797553177 1 0.531422555446625 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NEK7 ENSG00000151414 CDS Human protein_coding chr1:198222183 chr1:198222179 synonymous SNV . 0 17 hm5C_associated_SNPs_45631 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:198222167-198222201
64251 chr8 22054868 22054868 1 + T C UCEC 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCCGAGGTCATCACCTCCCAGTACAACAACACGCGCG < 41bp 1 0.17396828294462 1 0.314634561538696 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054868 nonsynonymous SNV 1.000 3 36 hm5C_associated_SNPs_45632 0 0 1 ZNF622 POSTAR2 ENCODE chr8:22054803-22054881
64251 chr2 120005520 120005520 1 + C T UCEC 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTCTTCAAGCTGCCCGTGTTCGTGGTCAAC < 41bp 1 0.251408166328349 1 0.025077223777771 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005520 nonsynonymous SNV 0.974 0 31 hm5C_associated_SNPs_45633 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr7 149576625 149576625 1 + C T UCEC 149576622 + 149576602 149576642 41 CTGGGGAGCCCTGGGCACAGCAGCGGCCGAGGGGATGTCCT CTGGGGAGCCCTGGGCACAGCAGTGGCCGAGGGGATGTCCT < 41bp 1 0.660247424295155 1 0.656983137130737 experiment 0.67950515140969 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control ATP6V0E2 ENSG00000171130 CDS Human protein_coding chr7:149576622 chr7:149576625 synonymous SNV . 0 24 hm5C_associated_SNPs_45634 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:149576622-149576689
64251 chr15 64967523 64967523 1 + C T UCEC 64967515 + 64967495 64967535 41 AAACACTACCCCTACTCAGCCCCTGACTCCCTTACATGTGG AAACACTACCCCTACTCAGCCCCTGACTTCCTTACATGTGG < 41bp 1 0.0442570056973395 1 0.0865764021873474 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF609 ENSG00000180357 CDS Human protein_coding chr15:64967515 chr15:64967523 nonsynonymous SNV 0.998 2 29 hm5C_associated_SNPs_45635 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:64967494-64967527
64251 chr1 171527202 171527202 1 + A G UCEC 171527220 + 171527200 171527240 41 ACAGTCACATGGCACTCTGACAGCTGAATTATGGGATAACA ACGGTCACATGGCACTCTGACAGCTGAATTATGGGATAACA < 41bp 1 0.313266284874842 1 0.486650735139847 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171527220 chr1:171527202 nonsynonymous SNV 0.998 1 3 hm5C_associated_SNPs_45636 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:171527181-171527203
64251 chr2 170592364 170592364 1 + C A UCEC 170592378 + 170592358 170592398 41 TGGAGGCTATTACTGGCATCCTTTATCAGAGGTTCACATAT TGGAGGATATTACTGGCATCCTTTATCAGAGGTTCACATAT < 41bp 1 0.354342928499143 1 0.717084050178528 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170592378 chr2:170592364 synonymous SNV . 0 7 hm5C_associated_SNPs_45637 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr2:170592334-170592372
64251 chrX 56592134 56592134 1 + G A UCEC 56592147 + 56592127 56592167 41 AGGAGGCGACATCAATGCAGCCATTGAAAGGCTGCTGGGCT AGGAGGCAACATCAATGCAGCCATTGAAAGGCTGCTGGGCT < 41bp 1 0.0532217300533258 1 0.0783413946628571 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592147 chrX:56592134 nonsynonymous SNV 0.997 4 8 hm5C_associated_SNPs_45638 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:56592109-56592145
64251 chr16 70589097 70589097 1 + C T UCEC 70589086 + 70589066 70589106 41 TTGCCCTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGAT TTGCCCTGACAGGAGGAGAGCTGGTCTATTTTGAGATGGAT < 41bp 1 0.245480611443419 1 0.166226148605347 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589086 chr16:70589097 synonymous SNV . 0 32 hm5C_associated_SNPs_45639 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr16 70589097 70589097 1 + C T UCEC 70589091 + 70589071 70589111 41 CTGACAGGAGGAGAGCTGGTCTATTTCGAGATGGATCCTGT CTGACAGGAGGAGAGCTGGTCTATTTTGAGATGGATCCTGT < 41bp 1 0.117828079560938 1 0.0688834190368652 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SF3B3 ENSG00000189091 CDS Human protein_coding chr16:70589091 chr16:70589097 synonymous SNV . 0 27 hm5C_associated_SNPs_45640 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:70588975-70589106
64251 chr17 65735656 65735656 1 + C T UCEC 65735673 + 65735653 65735693 41 TTCCTGTACCTGAAGTGTAGCGAAAATGCTACTATGACTCT TTCTTGTACCTGAAGTGTAGCGAAAATGCTACTATGACTCT < 41bp 1 0.647361505634474 1 0.720992982387543 experiment 0.705276988731052 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65735673 chr17:65735656 synonymous SNV . 0 4 hm5C_associated_SNPs_45641 0 0 13 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:65735631-65735661
64251 chr11 9459826 9459826 1 + G T UCEC 9459830 + 9459810 9459850 41 AGCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGG AGCTGAAGATGATGATTAAACCGGTAAGGGATTTTCAATGG < 41bp 1 0.630512647940382 1 0.149759918451309 experiment 0.738974704119237 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459830 chr11:9459826 stopgain 0.997 0 17 hm5C_associated_SNPs_45642 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9459761-9459826
64251 chr11 9459826 9459826 1 + G T UCEC 9459831 + 9459811 9459851 41 GCTGAAGATGATGATGAAACCGGTAAGGGATTTTCAATGGA GCTGAAGATGATGATTAAACCGGTAAGGGATTTTCAATGGA < 41bp 1 0.711166007064791 1 0.231154412031174 experiment 0.577667985870419 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IPO7 ENSG00000205339 CDS Human protein_coding chr11:9459831 chr11:9459826 stopgain 0.997 0 16 hm5C_associated_SNPs_45643 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9459761-9459826
64251 chr9 96411478 96411478 1 + G A UCEC 96411460 + 96411440 96411480 41 GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCGAG GCACCAACCGCAAGCGGGTCCTCAACGTCACCAACCTCAAG < 41bp 1 0.466195741183288 1 0.312393367290497 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411460 chr9:96411478 nonsynonymous SNV 0.992 4 39 hm5C_associated_SNPs_45644 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chr13 77570182 77570182 1 + G A UCEC 77570189 + 77570169 77570209 41 TGGTGTAATCAAGGCGCTGCCTGCTTTTTTGAGGGAATTGA TGGTGTAATCAAGACGCTGCCTGCTTTTTTGAGGGAATTGA < 41bp 1 0.599364021987234 1 0.123994618654251 experiment 0.801271956025531 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570189 chr13:77570182 nonsynonymous SNV 0.951 5 14 hm5C_associated_SNPs_45647 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr13:77570178-77570245
64251 chr19 6742994 6742994 1 + T C UCEC 6743009 + 6742989 6743029 41 AACAGTCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT AACAGCCCTTCGTACAGATTCTCCAGGAGGTGAATGACTTT < 41bp 1 0.734404649014973 1 0.827800750732422 experiment 0.531190701970053 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743009 chr19:6742994 nonsynonymous SNV 0.740 2 6 hm5C_associated_SNPs_45648 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr19:6742978-6743017
64251 chr22 38028062 38028062 1 + G T UCEC 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TCCATTTTTCCCGGGACCCACTGCCAGGGCGCTCCGACGTG < 41bp 1 0.36547567972306 1 0.119824886322021 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028062 nonsynonymous SNV 0.921 3 9 hm5C_associated_SNPs_45649 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:38028045-38028066
64251 chr1 162469799 162469799 1 + G A UCEC 162469797 + 162469777 162469817 41 TCTCCAAATGTGCCATCACGCTGTCTGTTGCTTGAACTCCT TCTCCAAATGTGCCATCACGCTATCTGTTGCTTGAACTCCT < 41bp 1 0.217926957975868 1 0.368896484375 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162469797 chr1:162469799 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_45650 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469758-162469829
64251 chr3 47891205 47891205 1 + C T UCEC 47891200 + 47891180 47891220 41 CAGCGTCTTCGTCCGGGACTCCTCTCAGGTGCACCCGCTAG CAGCGTCTTCGTCCGGGACTCCTCTTAGGTGCACCCGCTAG < 41bp 1 0.142359691022515 1 0.283894032239914 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX30 ENSG00000132153 CDS Human protein_coding chr3:47891200 chr3:47891205 stopgain 0.996 0 26 hm5C_associated_SNPs_45651 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr3:47891175-47891208
64251 chr8 104342121 104342121 1 + G C UCEC 104342108 + 104342088 104342128 41 CAAGAAACTTTGACAGAAATCCAAACCTCACCAGAAACATC CAAGAAACTTTGACAGAAATCCAAACCTCACCACAAACATC < 41bp 1 0.357427720917873 1 0.0965209603309631 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342108 chr8:104342121 nonsynonymous SNV 0.767 0 34 hm5C_associated_SNPs_45652 0 0 1 GRWD1 POSTAR2 ENCODE chr8:104342102-104342250
64251 chr2 74757420 74757420 1 + C G UCEC 74757418 + 74757398 74757438 41 GATACCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCCG GATACCAGGACCCGGGAGGCCTGAGAGAACTCTGGAACCCG < 41bp 1 0.789575445985289 1 0.775326669216156 experiment 0.420849108029421 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757418 chr2:74757420 stopgain 0.006 0 23 hm5C_associated_SNPs_45653 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:74757398-74757422
64251 chr22 39918062 39918062 1 + T A UCEC 39918059 + 39918039 39918079 41 TTCCCCTTTCCCCAGGGGTCCTGTCCTCCACTCCAGATCAT TTCCCCTTTCCCCAGGGGTCCTGACCTCCACTCCAGATCAT < 41bp 1 0.306710607841341 1 0.0521968305110931 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918059 chr22:39918062 nonsynonymous SNV 0.940 0 24 hm5C_associated_SNPs_45655 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:39917998-39918083
64251 chr19 17213061 17213061 1 + C T UCEC 17213070 + 17213050 17213090 41 ATCTACACGTACGCGGGGAGCATCCTGGTGGCCATCAACCC ATCTACACGTATGCGGGGAGCATCCTGGTGGCCATCAACCC < 41bp 1 0.0503021490120316 1 0.0718804001808167 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYO9B ENSG00000099331 CDS Human protein_coding chr19:17213070 chr19:17213061 synonymous SNV . 0 12 hm5C_associated_SNPs_45656 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:17213058-17213097
64251 chr1 39776663 39776663 1 + A G UCEC 39776662 + 39776642 39776682 41 GGACAATGCATTAAGGATTGCAGAGCAAGAGGTAAGCCCTA GGACAATGCATTAAGGATTGCGGAGCAAGAGGTAAGCCCTA < 41bp 1 0.220135101919957 1 0.690390586853027 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39776662 chr1:39776663 synonymous SNV . 0 22 hm5C_associated_SNPs_45657 0 0 11 BUD13 POSTAR2 ENCODE chr1:39776652-39776672
64251 chr17 73058300 73058300 1 + C T UCEC 73058313 + 73058293 73058333 41 AATAATTCTACCAATGGCATCGTCATAGAGCCGAGCGAAAA AATAATTTTACCAATGGCATCGTCATAGAGCCGAGCGAAAA < 41bp 1 0.37569210928544 1 0.465017944574356 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KCTD2 ENSG00000180901 CDS Human protein_coding chr17:73058313 chr17:73058300 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_45658 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:73058280-73058300
64251 chr19 1395395 1395395 1 + C T UCEC 1395382 + 1395362 1395402 41 AAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTAC AAGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCTCACCTAC < 41bp 1 0.435536929564543 1 0.340341538190842 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1395382 chr19:1395395 nonsynonymous SNV 0.499 4 34 hm5C_associated_SNPs_45659 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:1395387-1395430
64251 chr19 1395395 1395395 1 + C T UCEC 1395383 + 1395363 1395403 41 AGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCCCACCTACG AGCGAGACTGAGGCAAGGTCCCTGCAGGCTGCTCACCTACG < 41bp 1 0.190442625085883 1 0.679533123970032 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1395383 chr19:1395395 nonsynonymous SNV 0.499 4 33 hm5C_associated_SNPs_45660 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:1395387-1395430
64251 chr16 72141610 72141610 1 + T C UCEC 72141626 + 72141606 72141646 41 ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT ATGCCCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT < 41bp 1 0.707310119401499 1 0.151933401823044 experiment 0.585379761197002 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141626 chr16:72141610 nonsynonymous SNV 0.999 4 5 hm5C_associated_SNPs_45661 0 0 2 FXR2 POSTAR2 ENCODE chr16:72141579-72141657
64251 chr7 101821774 101821774 1 + G A UCEC 101821775 + 101821755 101821795 41 GCCATAGAGGTGCTGACCCGCTCCAGCCTAGAAGTTGAGTT GCCATAGAGGTGCTGACCCACTCCAGCCTAGAAGTTGAGTT < 41bp 1 0.530897632459439 1 0.846901178359985 experiment 0.938204735081122 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CUX1 ENSG00000257923 CDS Human protein_coding chr7:101821775 chr7:101821774 nonsynonymous SNV 0.998 0 20 hm5C_associated_SNPs_45662 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:101821753-101821786
64251 chr2 232573441 232573441 1 + A G UCEC 232573427 + 232573407 232573447 41 GTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCG GTGCCCCACCATGTCAGACGCAGCCGTAGACACCGGCTCCG < 41bp 1 0.675215065750528 1 0.18489795923233 experiment 0.649569868498944 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232573427 chr2:232573441 nonsynonymous SNV 0.998 0 35 hm5C_associated_SNPs_45663 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573430 + 232573410 232573450 41 CCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAA CCCCACCATGTCAGACGCAGCCGTAGACACCGGCTCCGAAA < 41bp 1 0.52167543702631 1 0.318287968635559 experiment 0.95664912594738 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTMA ENSG00000187514 CDS Human protein_coding chr2:232573430 chr2:232573441 nonsynonymous SNV 0.998 0 32 hm5C_associated_SNPs_45664 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573440 + 232573420 232573460 41 TCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAA TCAGACGCAGCCGTAGACACCGGCTCCGAAATCACCACCAA < 41bp 1 0.787567861149961 1 0.580470621585846 experiment 0.424864277700077 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573440 chr2:232573441 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_45665 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573443 + 232573423 232573463 41 GACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGT GACGCAGCCGTAGACACCGGCTCCGAAATCACCACCAAGGT < 41bp 1 0.589866046813538 1 0.372251391410828 experiment 0.820267906372925 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573443 chr2:232573441 nonsynonymous SNV 0.998 0 19 hm5C_associated_SNPs_45666 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573445 + 232573425 232573465 41 CGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGTGA CGCAGCCGTAGACACCGGCTCCGAAATCACCACCAAGGTGA < 41bp 1 0.654322420304273 1 0.177597880363464 experiment 0.691355159391454 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573445 chr2:232573441 nonsynonymous SNV 0.998 0 17 hm5C_associated_SNPs_45667 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573446 + 232573426 232573466 41 GCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGTGAG GCAGCCGTAGACACCGGCTCCGAAATCACCACCAAGGTGAG < 41bp 1 0.754900054509737 1 0.717478573322296 experiment 0.490199890980525 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573446 chr2:232573441 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_45668 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr2 232573441 232573441 1 + A G UCEC 232573457 + 232573437 232573477 41 CACCAGCTCCGAAATCACCACCAAGGTGAGGCTGGACGCCG CACCGGCTCCGAAATCACCACCAAGGTGAGGCTGGACGCCG < 41bp 1 0.470034290756717 1 0.352903604507446 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PTMA ENSG00000187514 CDS Human protein_coding chr2:232573457 chr2:232573441 nonsynonymous SNV 0.998 0 5 hm5C_associated_SNPs_45669 0 0 5 GRWD1 POSTAR2 ENCODE chr2:232573434-232573461
64251 chr12 13232887 13232887 1 + C T UCEC 13232896 + 13232876 13232916 41 CCAAAATTGGCCGTGGGGAGCTGCGAAGATTTCTCTCTAGG CCAAAATTGGCTGTGGGGAGCTGCGAAGATTTCTCTCTAGG < 41bp 1 0.475130151022256 1 0.313832759857178 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control FAM234B ENSG00000084444 CDS Human protein_coding chr12:13232896 chr12:13232887 nonsynonymous SNV 1.000 3 12 hm5C_associated_SNPs_45671 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334287 chr12:13232880-13232900
64251 chr16 30953728 30953728 1 + T C UCEC 30953726 + 30953706 30953746 41 GCTGGTGCTCTCTGGCTGCTCCTGGCTCTCTGTCTCTGCCC GCTGGTGCTCTCTGGCTGCTCCCGGCTCTCTGTCTCTGCCC < 41bp 1 0.689953503322409 1 0.265969306230545 experiment 0.620092993355181 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30953726 chr16:30953728 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_45672 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30953701-30953739
64251 chr1 156756693 156756693 1 + A T UCEC 156756700 + 156756680 156756720 41 ACAGTGATGAGGAAGTAGCCCCCGAAAACTTTTTCTCCCTC ACAGTGATGAGGATGTAGCCCCCGAAAACTTTTTCTCCCTC < 41bp 1 0.693236513742258 1 0.454860866069794 experiment 0.613526972515484 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PRCC ENSG00000143294 CDS Human protein_coding chr1:156756700 chr1:156756693 nonsynonymous SNV 1.000 1 14 hm5C_associated_SNPs_45673 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:156756663-156756703
64251 chr12 120876227 120876227 1 + T C UCEC 120876210 + 120876190 120876230 41 TGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCGGGGTGGC TGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCGGGGCGGC < 41bp 1 0.558811836309414 1 0.364409476518631 experiment 0.882376327381173 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control COX6A1 ENSG00000111775;ENSG00000111780 CDS Human other chr12:120876210 chr12:120876227 nonsynonymous SNV 0.986 4 38 hm5C_associated_SNPs_45674 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:120876179-120876243
64251 chr3 138329861 138329861 1 + C T UCEC 138329875 + 138329855 138329895 41 TATCTCCGGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA TATCTCTGGACTCTGCCACTCTGAGGTTAGTGCCCTGCCCA < 41bp 1 0.744139721869533 1 0.833303809165955 experiment 0.511720556260934 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138329875 chr3:138329861 nonsynonymous SNV 0.004 0 7 hm5C_associated_SNPs_45678 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:138329854-138329877
64251 chr20 62374329 62374329 1 + C T UCEC 62374321 + 62374301 62374341 41 AGCCTGCCGCTGGAAGAAAGCCTGCCAGCGGTTCCTGGACT AGCCTGCCGCTGGAAGAAAGCCTGCCAGTGGTTCCTGGACT < 41bp 1 0.143935144692392 1 0.143517792224884 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374321 chr20:62374329 nonsynonymous SNV 0.991 3 29 hm5C_associated_SNPs_45679 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:62374318-62374357
64251 chr1 36505447 36505447 1 + G T UCEC 36505465 + 36505445 36505485 41 CAGAGACCCCGACAGGAGATCATCCAGGACTTGGCCTCCAT CATAGACCCCGACAGGAGATCATCCAGGACTTGGCCTCCAT < 41bp 1 0.136891112824864 1 0.1889289021492 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGO3 ENSG00000126070 CDS Human protein_coding chr1:36505465 chr1:36505447 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_45680 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:36505437-36505455
64251 chr1 116942098 116942098 1 + G T UCEC 116942086 + 116942066 116942106 41 GAGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCAGAAA GAGCAGGCTGAGAGTGACATCATGAAGAGACATCCCAGAAA < 41bp 1 0.67959969363048 1 0.379130750894547 experiment 0.640800612739039 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942086 chr1:116942098 nonsynonymous SNV 1.000 3 33 hm5C_associated_SNPs_45681 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr1 116942098 116942098 1 + G T UCEC 116942108 + 116942088 116942128 41 TGAAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTG TGAAGAGACATCCCAGAAATCCCAAAACAGACAAACTTGTG < 41bp 1 0.412135866969688 1 0.222023785114288 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942108 chr1:116942098 nonsynonymous SNV 1.000 3 11 hm5C_associated_SNPs_45682 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr1 116942098 116942098 1 + G T UCEC 116942109 + 116942089 116942129 41 GAAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTGA GAAGAGACATCCCAGAAATCCCAAAACAGACAAACTTGTGA < 41bp 1 0.188740101946709 1 0.367498457431793 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942109 chr1:116942098 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_45683 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr1 116942098 116942098 1 + G T UCEC 116942110 + 116942090 116942130 41 AAGAGACAGCCCAGAAATCCCAAAACAGACAAACTTGTGAA AAGAGACATCCCAGAAATCCCAAAACAGACAAACTTGTGAA < 41bp 1 0.537667435787013 1 0.506913900375366 experiment 0.924665128425973 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116942110 chr1:116942098 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_45684 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116942056-116942150
64251 chr10 4877979 4877979 1 + C T UCEC 4877959 + 4877939 4877979 41 TTGCCTCTGGACGAGAGCAACATGGTTATTCCCAGTGACAC TTGCCTCTGGACGAGAGCAACATGGTTATTCCCAGTGACAT < 41bp 1 0.587809409642635 1 0.169598788022995 experiment 0.824381180714731 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AKR1E2 ENSG00000165568 CDS Human protein_coding chr10:4877959 chr10:4877979 nonsynonymous SNV 0.034 4 41 hm5C_associated_SNPs_45685 0 0 1 DDX24 POSTAR2 ENCODE chr10:4877930-4878003
64251 chr4 77661144 77661144 1 + T C UCEC 77661164 + 77661144 77661184 41 TCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTT CCAGGCTCAGGCCTGGCAAGCGGGTGAAGACAAGAGATCTT < 41bp 1 0.585276201075565 1 0.931592285633087 experiment 0.829447597848869 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77661164 chr4:77661144 synonymous SNV . 0 1 hm5C_associated_SNPs_45686 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77661137-77661160
64251 chr14 58666957 58666957 1 + G T UCEC 58666954 + 58666934 58666974 41 CCATGCCGCTCTACGAGGGCCTGGGGAGCGGCGGGGAGAAG CCATGCCGCTCTACGAGGGCCTGTGGAGCGGCGGGGAGAAG < 41bp 1 0.64048828684956 1 0.147189855575562 experiment 0.719023426300879 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58666954 chr14:58666957 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_45688 0 0 4 DDX3X POSTAR2 ENCODE chr14:58666906-58667014
64251 chr17 4701590 4701590 1 + T C UCEC 4701572 + 4701552 4701592 41 CAGCTTTCTTCTTTTATCCACAGCTCTCGCTTTGGCCATGG CAGCTTTCTTCTTTTATCCACAGCTCTCGCTTTGGCCACGG < 41bp 1 0.441782934340011 1 0.06980961561203 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701572 chr17:4701590 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_45689 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4701580-4701600
64251 chr8 22064477 22064477 1 + G A UCEC 22064464 + 22064444 22064484 41 AAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACCG AAGGAGTGCACGTGGGCCATCTCCAGCACCCCCAGGCACCG < 41bp 1 0.688152280988826 1 0.787684500217438 experiment 0.623695438022349 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|28418038;GSE74772;RNA-BisSeq;HCT116;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22064464 chr8:22064477 nonsynonymous SNV 0.987 3 34 hm5C_associated_SNPs_45690 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:22064444-22064479
64251 chr11 830693 830693 1 + G A UCEC 830674 + 830654 830694 41 GAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGC GAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCAC < 41bp 1 0.552380051062905 1 0.463044255971909 experiment 0.895239897874191 Functional Loss 31061524;GSE122267;BS-seq with improved protocol;Muscle;Control CRACR2B ENSG00000177685 CDS Human protein_coding chr11:830674 chr11:830693 nonsynonymous SNV 0.844 0 40 hm5C_associated_SNPs_45691 0 0 9 GRWD1 POSTAR2 ENCODE chr11:830615-830708
64251 chr22 44379853 44379853 1 + A C UCEC 44379837 + 44379817 44379857 41 TACCTTGGGGGACCCACAAGCATCCGCGGATTCAGCATGCA TACCTTGGGGGACCCACAAGCATCCGCGGATTCAGCCTGCA < 41bp 1 0.267894478140338 1 0.407356292009354 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379837 chr22:44379853 nonsynonymous SNV 0.998 1 37 hm5C_associated_SNPs_45694 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr6 33374111 33374111 1 + G A UCEC 33374114 + 33374094 33374134 41 GAGGCCTGCAGTGTGGGGCCCCCCTCAGTCTTGTGGACCTG GAGGCCTGCAGTGTGGGACCCCCCTCAGTCTTGTGGACCTG < 41bp 1 0.158843175918956 1 0.0545282661914825 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33374114 chr6:33374111 nonsynonymous SNV 0.928 3 18 hm5C_associated_SNPs_45697 0 0 4 GRWD1 POSTAR2 ENCODE chr6:33374064-33374112
64251 chr17 35346648 35346648 1 + C T UCEC 35346663 + 35346643 35346683 41 TCTATCGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCT TCTATTGAGTTCTTGGCAAACCTGAGCCAGCAGCTCAGCCT < 41bp 1 0.640210135356261 1 0.034627377986908 experiment 0.719579729287477 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122265;BS-seq with improved protocol;Lung;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control AATF ENSG00000108270 CDS Human other chr17:35346663 chr17:35346648 stopgain 0.995 1 6 hm5C_associated_SNPs_45698 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:35346617-35346655
64251 chr11 73103265 73103265 1 + G A UCEC 73103264 + 73103244 73103284 41 TGTGATGCTCAGAGTGGGGGCGGCGGGCCCGACGTGGCGTG TGTGATGCTCAGAGTGGGGGCAGCGGGCCCGACGTGGCGTG < 41bp 1 0.735046161017322 1 0.407850325107574 experiment 0.529907677965356 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RELT ENSG00000054967 CDS Human protein_coding chr11:73103264 chr11:73103265 nonsynonymous SNV 0.915 0 22 hm5C_associated_SNPs_45699 0 0 6 BUD13 POSTAR2 ENCODE chr11:73103241-73103319
64251 chr5 145641104 145641104 1 + T C UCEC 145641091 + 145641071 145641111 41 AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCTAATCCAA AGGTTGCTTTTAAGGGTGACCCAGAAGCAGCCCCAATCCAA < 41bp 1 0.422985446930834 1 0.367034047842026 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641091 chr5:145641104 nonsynonymous SNV 0.957 4 34 hm5C_associated_SNPs_45700 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145641088-145641134
64251 chr10 75551856 75551856 1 + G A UCEC 75551836 + 75551816 75551856 41 TGCTGGGCCCGGGCCCTGCCCTCTCGGCCAGGTGCCTCCCG TGCTGGGCCCGGGCCCTGCCCTCTCGGCCAGGTGCCTCCCA < 41bp 1 0.384392346003279 1 0.235008418560028 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551836 chr10:75551856 nonsynonymous SNV 0.964 1 41 hm5C_associated_SNPs_45702 0 0 8 DDX42 POSTAR2 ENCODE chr10:75551810-75551872
64251 chr2 242695343 242695343 1 + C A UCEC 242695362 + 242695342 242695382 41 CCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC CATGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGC < 41bp 1 0.503982948813679 1 0.282419264316559 experiment 0.992034102372641 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control D2HGDH ENSG00000180902 CDS Human protein_coding chr2:242695362 chr2:242695343 nonsynonymous SNV 0.198 5 2 hm5C_associated_SNPs_45703 0 0 1 GRWD1 POSTAR2 ENCODE chr2:242695332-242695422
64251 chr19 50334620 50334620 1 + G A UCEC 50334624 + 50334604 50334644 41 CCCAGGAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAG CCCAGGAGGGGTGAGCAGCCCTTCCCCAGCCCAGCTGGGAG < 41bp 1 0.27026907113986 1 0.284995049238205 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334624 chr19:50334620 nonsynonymous SNV 0.648 0 17 hm5C_associated_SNPs_45704 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr19 50334620 50334620 1 + G A UCEC 50334629 + 50334609 50334649 41 GAGGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCCCCA GAGGGGTGAGCAGCCCTTCCCCAGCCCAGCTGGGAGCCCCA < 41bp 1 0.388648819199424 1 0.342860013246536 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50334629 chr19:50334620 nonsynonymous SNV 0.648 0 12 hm5C_associated_SNPs_45705 0 0 2 BUD13 POSTAR2 ENCODE chr19:50334607-50334719
64251 chr8 145139715 145139715 1 + C T UCEC 145139712 + 145139692 145139732 41 TACTTGCTCCCCGGCCTCTCCCGCTTCGTCTCCATCGGCCT TACTTGCTCCCCGGCCTCTCCCGTTTCGTCTCCATCGGCCT < 41bp 1 0.133915477605935 1 0.0579718053340912 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control GPAA1 ENSG00000197858 CDS Human protein_coding chr8:145139712 chr8:145139715 synonymous SNV . 0 24 hm5C_associated_SNPs_45706 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr8:145139715-145139716
64251 chr5 74638494 74638494 1 + G C UCEC 74638509 + 74638489 74638529 41 TCATAGTGGGGACAGTGACACTGACCATCTGCATGATGTCC TCATACTGGGGACAGTGACACTGACCATCTGCATGATGTCC < 41bp 1 0.318296676653989 1 0.0974304974079132 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control HMGCR ENSG00000113161 CDS Human protein_coding chr5:74638509 chr5:74638494 nonsynonymous SNV 1.000 4 6 hm5C_associated_SNPs_45707 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:74638493-74638516
64251 chr7 79842162 79842162 1 + C T UCEC 79842156 + 79842136 79842176 41 AGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAG AGAAAAAATCAAAAAGAGCCCTCTCATTATATGCTATCCAG < 41bp 1 0.166634699830067 1 0.051021933555603 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79842156 chr7:79842162 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_45708 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:79842137-79842168
64251 chr2 191524447 191524447 1 + C T UCEC 191524463 + 191524443 191524483 41 CCCGCGTCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC CCCGTGTCCCCAAAGGAGAGCAGTGAGGCGCTGGATGCTGC < 41bp 1 0.553716253627342 1 0.336544960737228 experiment 0.892567492745315 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524463 chr2:191524447 nonsynonymous SNV 0.846 1 5 hm5C_associated_SNPs_45709 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:191524396-191524448
64251 chr11 66411255 66411255 1 + G A UCEC 66411252 + 66411232 66411272 41 TATAATTACGCAGAGCAGACCCTGTCCCAGCTGCCACAAGT TATAATTACGCAGAGCAGACCCTATCCCAGCTGCCACAAGT < 41bp 1 0.0202183648054098 1 0.0367194712162018 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RBM14-RBM4;RBM4 ENSG00000173933;ENSG00000248643 CDS Human other chr11:66411252 chr11:66411255 synonymous SNV . 0 24 hm5C_associated_SNPs_45710 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:66411235-66411268
64251 chr11 4142938 4142938 1 + T C UCEC 4142924 + 4142904 4142944 41 AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGACCTTTTC < 41bp 1 0.614329425904609 1 0.519353806972504 experiment 0.771341148190782 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142924 chr11:4142938 synonymous SNV . 0 35 hm5C_associated_SNPs_45711 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:4142923-4142948
64251 chr6 57012757 57012757 1 + G A UCEC 57012758 + 57012738 57012778 41 GAATATGTAAAACAGCACTGCATGTCTTTGGCAAGCCACAA GAATATGTAAAACAGCACTACATGTCTTTGGCAAGCCACAA < 41bp 1 0.0730381822006595 1 0.26089072227478 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZNF451 ENSG00000112200 CDS Human protein_coding chr6:57012758 chr6:57012757 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_45712 0 0 3 EIF3H POSTAR2 ENCODE chr6:57012727-57012770
64251 chr17 37359332 37359332 1 + A G UCEC 37359313 + 37359293 37359333 41 TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATAC TGAGGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATGC < 41bp 1 0.789464370226712 1 0.0841883420944214 experiment 0.421071259546576 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359313 chr17:37359332 nonsynonymous SNV 0.342 4 40 hm5C_associated_SNPs_45713 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359332 37359332 1 + A G UCEC 37359316 + 37359296 37359336 41 GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGT GGAGAATGAGGATTTTGCGCCGGCTGCTCAGAAGATGCCGT < 41bp 1 0.400289641978328 1 0.273587286472321 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359316 chr17:37359332 nonsynonymous SNV 0.342 4 37 hm5C_associated_SNPs_45714 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359332 37359332 1 + A G UCEC 37359319 + 37359299 37359339 41 GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAA GAATGAGGATTTTGCGCCGGCTGCTCAGAAGATGCCGTGAA < 41bp 1 0.427020526598238 1 0.115762263536453 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359319 chr17:37359332 nonsynonymous SNV 0.342 4 34 hm5C_associated_SNPs_45715 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359332 37359332 1 + A G UCEC 37359322 + 37359302 37359342 41 TGAGGATTTTGCGCCGGCTGCTCAGAAGATACCGTGAATCT TGAGGATTTTGCGCCGGCTGCTCAGAAGATGCCGTGAATCT < 41bp 1 0.468340696743297 1 0.136485755443573 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359322 chr17:37359332 nonsynonymous SNV 0.342 4 31 hm5C_associated_SNPs_45716 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359332 37359332 1 + A G UCEC 37359333 + 37359313 37359353 41 CGCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGA CGCCGGCTGCTCAGAAGATGCCGTGAATCTAAGAAGATCGA < 41bp 1 0.194057189696321 1 0.140712738037109 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359333 chr17:37359332 nonsynonymous SNV 0.342 4 20 hm5C_associated_SNPs_45717 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr17 37359332 37359332 1 + A G UCEC 37359334 + 37359314 37359354 41 GCCGGCTGCTCAGAAGATACCGTGAATCTAAGAAGATCGAT GCCGGCTGCTCAGAAGATGCCGTGAATCTAAGAAGATCGAT < 41bp 1 0.709794646099518 1 0.202814668416977 experiment 0.580410707800963 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout RPL19 ENSG00000108298 CDS Human protein_coding chr17:37359334 chr17:37359332 nonsynonymous SNV 0.342 4 19 hm5C_associated_SNPs_45718 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:37359269-37359364
64251 chr1 173819555 173819555 1 + A G UCEC 173819569 + 173819549 173819589 41 TTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCCT TTAATCGGACTAATGGAGACCCAAGAGGAAGATGTGGTCCT < 41bp 1 0.160073340237861 1 0.364049077033997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DARS2 ENSG00000117593 CDS Human protein_coding chr1:173819569 chr1:173819555 nonsynonymous SNV 0.311 1 7 hm5C_associated_SNPs_45721 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173819528-173819588
64251 chr7 155534728 155534728 1 + A G UCEC 155534723 + 155534703 155534743 41 TGGCGGGTTCCAGAAGCTCACAGGGAAAGACGGAAGTGAAA TGGCGGGTTCCAGAAGCTCACAGGGGAAGACGGAAGTGAAA < 41bp 1 0.769304571016278 1 0.451935350894928 experiment 0.461390857967443 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM33 ENSG00000184863 CDS Human protein_coding chr7:155534723 chr7:155534728 synonymous SNV . 0 26 hm5C_associated_SNPs_45722 0 0 4 GRWD1 POSTAR2 ENCODE chr7:155534641-155534731
64251 chr4 170641138 170641138 1 + T C UCEC 170641153 + 170641133 170641173 41 AATAATGTTCAACTGAATCTCACAGATGAGGAGAGAGAAGA AATAACGTTCAACTGAATCTCACAGATGAGGAGAGAGAAGA < 41bp 1 0.722743483617867 1 0.483511835336685 experiment 0.554513032764266 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170641153 chr4:170641138 nonsynonymous SNV 1.000 2 6 hm5C_associated_SNPs_45723 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:170641134-170641157
64251 chr16 72132848 72132848 1 + G A UCEC 72132846 + 72132826 72132866 41 GTCTGTGAGGGGCAAGTACTCGGATGACACGCCTCTGCCAA GTCTGTGAGGGGCAAGTACTCGAATGACACGCCTCTGCCAA < 41bp 1 0.780302701844017 1 0.903051018714905 experiment 0.439394596311966 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72132846 chr16:72132848 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_45724 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:72132845-72132865
64251 chr13 111147746 111147746 1 + C A UCEC 111147745 + 111147725 111147765 41 CTCCTGGGGAAAGAGGTGACCCAGGAGAGGCCAACACCCTT CTCCTGGGGAAAGAGGTGACCAAGGAGAGGCCAACACCCTT < 41bp 1 0.431314032108117 1 0.764168441295624 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control COL4A2 ENSG00000134871 CDS Human protein_coding chr13:111147745 chr13:111147746 nonsynonymous SNV 0.032 4 22 hm5C_associated_SNPs_45727 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:111147740-111147769
64251 chr3 49713563 49713563 1 + G T UCEC 49713571 + 49713551 49713591 41 AAGCGCCCCAAGGCCGAGTCCTTCTTTCAGACCAAAGCCTT AAGCGCCCCAAGTCCGAGTCCTTCTTTCAGACCAAAGCCTT < 41bp 1 0.166510853730267 1 0.0686521530151367 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control APEH ENSG00000164062 CDS Human protein_coding chr3:49713571 chr3:49713563 nonsynonymous SNV 0.967 0 13 hm5C_associated_SNPs_45729 0 0 6 FXR2 POSTAR2 ENCODE chr3:49713520-49713590
64251 chr16 66998549 66998549 1 + G A UCEC 66998564 + 66998544 66998584 41 GCAGGGCTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT GCAGGACTGTTCCACAGAGCCATCACACAGAGTGGGGTCAT < 41bp 1 0.447910349626997 1 0.123782753944397 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CES3 ENSG00000172828 CDS Human protein_coding chr16:66998564 chr16:66998549 synonymous SNV . 0 6 hm5C_associated_SNPs_45730 0 0 1 PPIG POSTAR2 ENCODE chr16:66998524-66998563
64251 chr19 42392282 42392282 1 + G A UCEC 42392281 + 42392261 42392301 41 AGGCCTCCCCAGGCCCCTCCCGGCCTGGCCTGGTTCCCGTC AGGCCTCCCCAGGCCCCTCCCAGCCTGGCCTGGTTCCCGTC < 41bp 1 0.263116729476718 1 0.741267561912537 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392281 chr19:42392282 nonsynonymous SNV 0.247 2 22 hm5C_associated_SNPs_45731 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:42392280-42392300
64251 chr2 15732063 15732063 1 + G A UCEC 15732066 + 15732046 15732086 41 GACGGGGTGAAGATGGCGGCCTTCTCCGGTGCGTTTGTGGA GACGGGGTGAAGATGGCAGCCTTCTCCGGTGCGTTTGTGGA < 41bp 1 0.391968881158225 1 0.154820501804352 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX1 ENSG00000079785 CDS Human protein_coding chr2:15732066 chr2:15732063 synonymous SNV . 0 18 hm5C_associated_SNPs_45732 0 0 12 BUD13 POSTAR2 ENCODE chr2:15732043-15732073
64251 chr19 58290954 58290954 1 + T C UCEC 58290970 + 58290950 58290990 41 TTATTATACATCTGAGAGTTCACACTGGAGAAAGGCCTTAT TTATCATACATCTGAGAGTTCACACTGGAGAAAGGCCTTAT < 41bp 1 0.224049017288204 1 0.0635986924171448 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58290970 chr19:58290954 synonymous SNV . 0 5 hm5C_associated_SNPs_45733 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:58290939-58290975
64251 chrX 64956742 64956742 1 + G A UCEC 64956736 + 64956716 64956756 41 TTGAACGGGAGAAGGAGGAGCTGATGGAGAGGCTGAAGCAG TTGAACGGGAGAAGGAGGAGCTGATGAAGAGGCTGAAGCAG < 41bp 1 0.368301991845203 1 0.403478443622589 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MSN ENSG00000147065 CDS Human protein_coding chrX:64956736 chrX:64956742 nonsynonymous SNV 0.996 1 27 hm5C_associated_SNPs_45734 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:64956718-64956750
64251 chr1 231401782 231401782 1 + G T UCEC 231401783 + 231401763 231401803 41 TTCTGAATATTGTGATGGAGCCATTTTTTAAAAGAGAAGTT TTCTGAATATTGTGATGGATCCATTTTTTAAAAGAGAAGTT < 41bp 1 0.103824968514553 1 0.050985187292099 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control GNPAT ENSG00000116906 CDS Human protein_coding chr1:231401783 chr1:231401782 nonsynonymous SNV 0.999 2 20 hm5C_associated_SNPs_45736 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231401767-231401796
64251 chr17 37816514 37816514 1 + G A UCEC 37816499 + 37816479 37816519 41 GTGTACACCATTGAAGTTCCCTTTCACGGCAAGACGTTTAT GTGTACACCATTGAAGTTCCCTTTCACGGCAAGACATTTAT < 41bp 1 0.0467741709037189 1 0.0245318710803986 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control STARD3 ENSG00000131748 CDS Human protein_coding chr17:37816499 chr17:37816514 nonsynonymous SNV . 0 36 hm5C_associated_SNPs_45737 0 0 3 BUD13 POSTAR2 ENCODE chr17:37816451-37816544
64251 chr16 626234 626234 1 + G A UCEC 626254 + 626234 626274 41 GCCCTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAG ACCCTCGTTCCTGTGGCTGACGTGAGTGGACTGGGGTGGAG < 41bp 1 0.793920940850674 1 0.44940248131752 experiment 0.412158118298652 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIGQ ENSG00000007541 CDS Human protein_coding chr16:626254 chr16:626234 nonsynonymous SNV 0.026 1 1 hm5C_associated_SNPs_45740 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr16:626183-626240
64251 chr5 10258301 10258301 1 + C T UCEC 10258282 + 10258262 10258302 41 GAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGACG GAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGATG < 41bp 1 0.415102638525467 1 0.241710662841797 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CCT5 ENSG00000150753 CDS Human protein_coding chr5:10258282 chr5:10258301 synonymous SNV . 0 40 hm5C_associated_SNPs_45741 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr5:10258227-10258316
64251 chr16 21190820 21190820 1 + T C UCEC 21190826 + 21190806 21190846 41 CAGCAAAACACCAGTTGTGACTTTCTGCCAGCCATGAAGTC CAGCAAAACACCAGCTGTGACTTTCTGCCAGCCATGAAGTC < 41bp 1 0.0616158032687862 1 0.0434902310371399 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TMEM159 ENSG00000011638 CDS Human protein_coding chr16:21190826 chr16:21190820 synonymous SNV . 0 15 hm5C_associated_SNPs_45742 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:21190796-21190831
64251 chr8 9620700 9620700 1 + G A UCEC 9620699 + 9620679 9620719 41 TCACTGTGTTAATCAGGGAACGATTTTGCTGGATCTTGCTC TCACTGTGTTAATCAGGGAACAATTTTGCTGGATCTTGCTC < 41bp 1 0.0729942470149578 1 0.0845592617988586 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TNKS ENSG00000173273 CDS Human protein_coding chr8:9620699 chr8:9620700 synonymous SNV . 0 22 hm5C_associated_SNPs_45743 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:9620668-9620700
64251 chr3 58112452 58112452 1 + C T UCEC 58112439 + 58112419 58112459 41 TGCTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTA TGCTGAGTACATTCCTTTCGCACCGGGGGATTATGATGTTA < 41bp 1 0.451523379936074 1 0.157622963190079 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112439 chr3:58112452 synonymous SNV . 0 34 hm5C_associated_SNPs_45744 1 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr3 58112452 58112452 1 + C T UCEC 58112441 + 58112421 58112461 41 CTGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAAT CTGAGTACATTCCTTTCGCACCGGGGGATTATGATGTTAAT < 41bp 1 0.212244887369182 1 0.323051989078522 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112441 chr3:58112452 synonymous SNV . 0 32 hm5C_associated_SNPs_45745 1 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr3 58112452 58112452 1 + C T UCEC 58112442 + 58112422 58112462 41 TGAGTACATTCCTTTCGCACCGGGGGATTACGATGTTAATA TGAGTACATTCCTTTCGCACCGGGGGATTATGATGTTAATA < 41bp 1 0.392310027345162 1 0.903830349445343 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FLNB ENSG00000136068 CDS Human protein_coding chr3:58112442 chr3:58112452 synonymous SNV . 0 31 hm5C_associated_SNPs_45746 1 0 3 CDC40 POSTAR2 ENCODE chr3:58112450-58112489
64251 chr15 100215624 100215624 1 + G A UCEC 100215637 + 100215617 100215657 41 CACTACAGACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC CACTACAAACCTCACAGTGCCAAATGGAGCTGGAAGCAGTC < 41bp 1 0.271071961224188 1 0.457383155822754 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MEF2A ENSG00000068305 CDS Human protein_coding chr15:100215637 chr15:100215624 nonsynonymous SNV 0.981 4 8 hm5C_associated_SNPs_45748 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:100215612-100215637
64251 chr5 145858109 145858109 1 + G A UCEC 145858103 + 145858083 145858123 41 GGTCTTCTTTTATAATCCCACCACTCGTCTTTCTATGTGGG GGTCTTCTTTTATAATCCCACCACTCATCTTTCTATGTGGG < 41bp 1 0.0650412797978777 1 0.0461867153644562 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145858103 chr5:145858109 nonsynonymous SNV 0.997 4 27 hm5C_associated_SNPs_45750 0 0 28 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:145858060-145858120
64251 chr5 14359525 14359525 1 + C T UCEC 14359530 + 14359510 14359550 41 TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG TCAACCACATTGAGATGGTGCTGCAGCAGCTGGACGAGGCG < 41bp 1 0.348767494814053 1 0.49131640791893 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359530 chr5:14359525 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_45751 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:14359520-14359540
64251 chr19 13051228 13051228 1 + C T UCEC 13051210 + 13051190 13051230 41 AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGCGG AGGATCCTGATGCTTCAAAACCGGAAGACTGGGATGAGTGG < 41bp 1 0.705971022315853 1 0.416328728199005 experiment 0.588057955368294 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13051210 chr19:13051228 nonsynonymous SNV 0.996 4 39 hm5C_associated_SNPs_45752 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr19 36227604 36227604 1 + C T UCEC 36227620 + 36227600 36227640 41 CGAGCTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG CGAGTTCTGAGGAAGAGCCTCCATCCCCAGATGATAAAGAG < 41bp 1 0.00751147651703197 1 0.109802752733231 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KMT2B ENSG00000272333 CDS Human protein_coding chr19:36227620 chr19:36227604 synonymous SNV . 0 5 hm5C_associated_SNPs_45753 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36227590-36227626
64251 chrX 47083802 47083802 1 + T C UCEC 47083794 + 47083774 47083814 41 CTGCCACCAGAGATTGTGCACGAGGACTTGAAGATGGGGTC CTGCCACCAGAGATTGTGCACGAGGACTCGAAGATGGGGTC < 41bp 1 0.704708573338461 1 0.875840902328491 experiment 0.590582853323077 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083794 chrX:47083802 nonsynonymous SNV 1.000 2 29 hm5C_associated_SNPs_45762 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:47083782-47083803
64251 chrX 47083802 47083802 1 + T C UCEC 47083814 + 47083794 47083834 41 CGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGG CGAGGACTCGAAGATGGGGTCTGATGGGGAGAGTGACCAGG < 41bp 1 0.432091651240003 1 0.107244879007339 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083814 chrX:47083802 nonsynonymous SNV 1.000 2 9 hm5C_associated_SNPs_45763 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:47083782-47083803
64251 chr16 19548877 19548877 1 + A G UCEC 19548865 + 19548845 19548885 41 AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA AAAAAGATACCCTAAGGGATCTGGCTTCGTTAGCAAGAATA < 41bp 1 0.424006057551856 1 0.243605494499207 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548865 chr16:19548877 nonsynonymous SNV 0.993 0 33 hm5C_associated_SNPs_45764 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr16:19548850-19548877
64251 chr17 35310480 35310480 1 + G A UCEC 35310470 + 35310450 35310490 41 GGGATGACGCGGAAGACTCCCAAGGCGAGAGTGAGGAAGAC GGGATGACGCGGAAGACTCCCAAGGCGAGAATGAGGAAGAC < 41bp 1 0.796696486459212 1 0.56956684589386 experiment 0.406607027081576 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control AATF ENSG00000108270 CDS Human other chr17:35310470 chr17:35310480 nonsynonymous SNV 0.705 0 31 hm5C_associated_SNPs_45765 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:35310385-35310540
64251 chr19 41807543 41807543 1 + C T UCEC 41807534 + 41807514 41807554 41 TTTGTCCCACTGACGAGGACCTAAAAGACCGAACAATAAAG TTTGTCCCACTGACGAGGACCTAAAAGACTGAACAATAAAG < 41bp 1 0.288845360765067 1 0.191483050584793 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control HNRNPUL1 ENSG00000105323 CDS Human protein_coding chr19:41807534 chr19:41807543 stopgain 0.993 1 30 hm5C_associated_SNPs_45767 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41807444-41807602
64251 chr1 220313612 220313612 1 + T C UCEC 220313599 + 220313579 220313619 41 ACGTTTTATACCAGAGAGCTCTCTAACTTTTATTTCAGTAT ACGTTTTATACCAGAGAGCTCTCTAACTTTTATCTCAGTAT < 41bp 1 0.347119124392304 1 0.629381060600281 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control IARS2 ENSG00000067704 CDS Human protein_coding chr1:220313599 chr1:220313612 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_45768 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr1:220313524-220313621
64251 chr19 10561589 10561589 1 + G A UCEC 10561575 + 10561555 10561595 41 TGTCTGGAGCAGCTGGAGACCATGCAGACCTATCGCTCTGT TGTCTGGAGCAGCTGGAGACCATGCAGACCTATCACTCTGT < 41bp 1 0.196436937119726 1 0.433032929897308 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE4A ENSG00000065989 CDS Human protein_coding chr19:10561575 chr19:10561589 nonsynonymous SNV 0.984 1 35 hm5C_associated_SNPs_45771 0 0 3 UCHL5 POSTAR2 ENCODE chr19:10561533-10561613
64251 chr15 22933577 22933577 1 + C T UCEC 22933564 + 22933544 22933584 41 TCTTTTTGTTTTCAAAGGGCCGCTCAGTTTTTACGTAAAAT TCTTTTTGTTTTCAAAGGGCCGCTCAGTTTTTATGTAAAAT < 41bp 1 0.0229608917783089 1 0.0714161694049835 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CYFIP1 ENSG00000068793 CDS Human other chr15:22933564 chr15:22933577 nonsynonymous SNV . 0 34 hm5C_associated_SNPs_45772 0 0 1 BUD13 POSTAR2 ENCODE chr15:22933568-22933617
64251 chr3 184104639 184104639 1 + A G UCEC 184104655 + 184104635 184104675 41 ACGAACGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA ACGAGCGGTGATCTGTGACCCGGTGGTGTGCCCACCGCCCA < 41bp 1 0.756004911599501 1 0.72916316986084 experiment 0.487990176800998 Functional Loss 31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout CHRD ENSG00000090539 CDS Human protein_coding chr3:184104655 chr3:184104639 nonsynonymous SNV 0.564 1 5 hm5C_associated_SNPs_45773 0 0 2 BUD13 POSTAR2 ENCODE chr3:184104634-184104700
64251 chr11 17393601 17393601 1 + A G UCEC 17393604 + 17393584 17393624 41 CTCTCAAGTGCATTCTGAAACACTGGAACTCCTTTGACACT CTCTCAAGTGCATTCTGGAACACTGGAACTCCTTTGACACT < 41bp 1 0.221685790965959 1 0.0984623730182648 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393604 chr11:17393601 nonsynonymous SNV 0.732 0 18 hm5C_associated_SNPs_45774 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr11:17393559-17393633
64251 chr2 37475367 37475367 1 + G A UCEC 37475350 + 37475330 37475370 41 GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGA GATATGATATGTTAATGAATCCAAAGAAGATGGGAGAAAGA < 41bp 1 0.398916921974601 1 0.669553875923157 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475350 chr2:37475367 synonymous SNV . 0 38 hm5C_associated_SNPs_45775 0 0 1 LIN28B POSTAR2 ENCODE chr2:37475350-37475447
64251 chr2 37475367 37475367 1 + G A UCEC 37475351 + 37475331 37475371 41 ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAGAGAT ATATGATATGTTAATGAATCCAAAGAAGATGGGAGAAAGAT < 41bp 1 0.38217753094069 1 0.334486961364746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475351 chr2:37475367 synonymous SNV . 0 37 hm5C_associated_SNPs_45776 0 0 1 LIN28B POSTAR2 ENCODE chr2:37475350-37475447
64251 chr10 103908238 103908238 1 + C T UCEC 103908226 + 103908206 103908246 41 CATCCTCATCATCCAGTTCTCGAAGCCGCTCACGATCCCCA CATCCTCATCATCCAGTTCTCGAAGCCGCTCATGATCCCCA < 41bp 1 0.47888017029934 1 0.793367624282837 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908226 chr10:103908238 stopgain 0.008 1 33 hm5C_associated_SNPs_45777 0 0 2 PCBP2 POSTAR2 ENCODE chr10:103908199-103908243
64251 chr19 52714686 52714686 1 + C T UCEC 52714692 + 52714672 52714712 41 CGCACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCG CGCACCTCGGCCTGTGGCCTCTTCTCCGTCTGCTACCCCCG < 41bp 1 0.433826247827528 1 0.10617795586586 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714692 chr19:52714686 synonymous SNV . 0 15 hm5C_associated_SNPs_45778 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr19 52714686 52714686 1 + C T UCEC 52714695 + 52714675 52714715 41 ACCTCGGCCTGCGGCCTCTTCTCCGTCTGCTACCCCCGAGT ACCTCGGCCTGTGGCCTCTTCTCCGTCTGCTACCCCCGAGT < 41bp 1 0.725992839665183 1 0.900643110275269 experiment 0.548014320669635 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPP2R1A ENSG00000105568 CDS Human protein_coding chr19:52714695 chr19:52714686 synonymous SNV . 0 12 hm5C_associated_SNPs_45779 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:52714661-52714692
64251 chr1 109643050 109643050 1 + C A UCEC 109643033 + 109643013 109643053 41 TGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCT TGACCCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGATCT < 41bp 1 0.131532296668742 1 0.145508378744125 experiment 1 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target|23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643033 chr1:109643050 . . 0 38 hm5C_associated_SNPs_45781 0 0 52 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643050 109643050 1 + C A UCEC 109643037 + 109643017 109643057 41 CCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGCTCTCCTC CCCAGCCCCGCCGGGCCGACCCGAAATGAAAAGATCTCCTC < 41bp 1 0.668829065435276 1 0.349602460861206 experiment 0.662341869129447 Functional Loss 23604283;GSE38957;Aza-IP;HeLa;DNMT2 target SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643037 chr1:109643050 . . 0 34 hm5C_associated_SNPs_45782 0 0 52 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr1 109643050 109643050 1 + C A UCEC 109643068 + 109643048 109643088 41 AGCTCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG AGATCTCCTCCTGCGAAGCCCCCTCGGGGCGCTGTGCAGCG < 41bp 1 0.153001594729939 1 0.220854580402374 experiment 1 Functional Loss 23604283;GSE38958;Aza-IP;HeLa;Control SCARNA2 ENSG00000270066 ncRNA_exonic Human lincRNA chr1:109643068 chr1:109643050 . . 0 3 hm5C_associated_SNPs_45783 0 0 52 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109642785-109643267
64251 chr19 541465 541465 1 + C T UCEC 541454 + 541434 541474 41 CGCCCGACGAGGGCTCAGACCTCTTCTACGACGACTACTAC CGCCCGACGAGGGCTCAGACCTCTTCTACGATGACTACTAC < 41bp 1 0.223278347862475 1 0.46093761920929 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control CDC34 ENSG00000099804 CDS Human protein_coding chr19:541454 chr19:541465 synonymous SNV . 0 32 hm5C_associated_SNPs_45784 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:541451-541478
64251 chr15 68480059 68480059 1 + C T UCEC 68480074 + 68480054 68480094 41 AGCAGCCTGGTTTCTTCCAACAGCCTAAGGGAAAGCCATAG AGCAGTCTGGTTTCTTCCAACAGCCTAAGGGAAAGCCATAG < 41bp 1 0.501731155871543 1 0.515818536281586 experiment 0.996537688256914 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68480074 chr15:68480059 synonymous SNV . 0 6 hm5C_associated_SNPs_45785 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:68480035-68480061
64251 chr3 184040728 184040728 1 + G A UCEC 184040721 + 184040701 184040741 41 CCAGAGGGATTGCCACATATCAGTGACGTGGTGCTGGACAA CCAGAGGGATTGCCACATATCAGTGACATGGTGCTGGACAA < 41bp 1 0.643404592823791 1 0.400867104530334 experiment 0.713190814352418 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control EIF4G1 ENSG00000114867 CDS Human protein_coding chr3:184040721 chr3:184040728 nonsynonymous SNV 0.997 4 28 hm5C_associated_SNPs_45786 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:184040614-184040738
64251 chr14 105916470 105916470 1 + G A UCEC 105916480 + 105916460 105916500 41 CTGCGGCATCGGGAGCTGTTCCTCTCCCGGCAGCTGGAGTC CTGCGGCATCAGGAGCTGTTCCTCTCCCGGCAGCTGGAGTC < 41bp 1 0.151628574761219 1 0.0918189883232117 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105916480 chr14:105916470 nonsynonymous SNV 0.989 4 11 hm5C_associated_SNPs_45787 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105916450-105916498
64251 chr1 148561080 148561080 1 + G A UCEC 148561060 + 148561040 148561080 41 AGAAACTTCCCCATTCGGTGCACCAAGAGCAACCTCACACG AGAAACTTCCCCATTCGGTGCACCAAGAGCAACCTCACACA < 41bp 1 0.536713993395505 1 0.0491900146007538 experiment 0.92657201320899 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NBPF25P ENSG00000243452 UTR5 Human other chr1:148561060 chr1:148561080 . . 0 41 hm5C_associated_SNPs_45788 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:148561054-148561091
64251 chr14 89336497 89336497 1 + A G UCEC 89336501 + 89336481 89336521 41 GCATGCATTGGAAGCAACCACTTCTATTCTGATCAGCCAGA GCATGCATTGGAAGCAGCCACTTCTATTCTGATCAGCCAGA < 41bp 1 0.229501083308944 1 0.0619073212146759 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC8 ENSG00000165533 CDS Human protein_coding chr14:89336501 chr14:89336497 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_45790 0 0 1 ZNF622 POSTAR2 ENCODE chr14:89336414-89336513
64251 chr11 64085799 64085799 1 + T C UCEC 64085786 + 64085766 64085806 41 GCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTC GCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGCGGGCGTC < 41bp 1 0.640850189377742 1 0.262965768575668 experiment 0.718299621244517 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085786 chr11:64085799 nonsynonymous SNV 0.085 0 34 hm5C_associated_SNPs_45792 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:64085780-64085800
64251 chr3 40353050 40353050 1 + G T UCEC 40353054 + 40353034 40353074 41 GAAAAAACATCTGCCAGTTTCTCTTGGAGGTGAGTGATTGG GAAAAAACATCTGCCATTTTCTCTTGGAGGTGAGTGATTGG < 41bp 1 0.45522632917037 1 0.211148858070374 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EIF1B ENSG00000114784 CDS Human protein_coding chr3:40353054 chr3:40353050 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_45793 0 0 6 GPKOW POSTAR2 ENCODE chr3:40353031-40353080
64251 chr3 126725010 126725010 1 + C T UCEC 126725001 + 126724981 126725021 41 TCTGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTC TCTGTGGACTTCGTCTTCTACAACTGCAGTGTCCACCAGTC < 41bp 1 0.233834566720427 1 0.26050528883934 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126725001 chr3:126725010 synonymous SNV . 0 30 hm5C_associated_SNPs_45794 0 0 2 DDX24 POSTAR2 ENCODE chr3:126724971-126725027
64251 chr6 31602097 31602097 1 + G T UCEC 31602080 + 31602060 31602100 41 TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACAGGCA TGAGGGCCCAGGCCCTCAGGCAGAGTCCAGAGATACATGCA < 41bp 1 0.41193530380043 1 0.820781111717224 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31602080 chr6:31602097 nonsynonymous SNV 0.997 3 38 hm5C_associated_SNPs_45795 0 0 10 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:31602080-31602100
64251 chr19 34868408 34868408 1 + C T UCEC 34868413 + 34868393 34868433 41 TCGCCCCTGTGCCAGCGTGTCCGGAGCGGTGACTGGAAGGG TCGCCCCTGTGCCAGTGTGTCCGGAGCGGTGACTGGAAGGG < 41bp 1 0.726281755847144 1 0.493001848459244 experiment 0.547436488305711 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GPI ENSG00000105220 CDS Human protein_coding chr19:34868413 chr19:34868408 nonsynonymous SNV 0.992 2 16 hm5C_associated_SNPs_45800 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:34868400-34868420
64251 chr19 54377048 54377048 1 + G A UCEC 54377053 + 54377033 54377073 41 ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC ATCGTGGAGCTGTGCAGGCTCCAGGCCCGCTTCCCCCTGTC < 41bp 1 0.66304408502872 1 0.820430755615234 experiment 0.67391182994256 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377053 chr19:54377048 nonsynonymous SNV 0.139 3 16 hm5C_associated_SNPs_45801 0 0 4 IGF2BP1 POSTAR2 ENCODE chr19:54376999-54377063
64251 chr19 13054431 13054431 1 + G A UCEC 13054419 + 13054399 13054439 41 GCATACGCTGAGGAGTTTGGCAACGAGACGTGGGGCGTAAC GCATACGCTGAGGAGTTTGGCAACGAGACGTGAGGCGTAAC < 41bp 1 0.631186492749257 1 0.785386741161346 experiment 0.737627014501487 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CALR ENSG00000179218 CDS Human protein_coding chr19:13054419 chr19:13054431 stopgain 0.883 1 33 hm5C_associated_SNPs_45804 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13054347-13054437
64251 chr3 37367180 37367180 1 + C T UCEC 37367165 + 37367145 37367185 41 TACAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCA TACAACTAAAGTTAAGGAGGCACTGTTAATTAAAATTTGCA < 41bp 1 0.0595136377452342 1 0.080351322889328 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367165 chr3:37367180 nonsynonymous SNV 0.009 0 36 hm5C_associated_SNPs_45806 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:37367160-37367200
64251 chr3 37367180 37367180 1 + C T UCEC 37367167 + 37367147 37367187 41 CAACTAAAGTTAAGGAGGCACTGTTAATTAAAACTTGCACA CAACTAAAGTTAAGGAGGCACTGTTAATTAAAATTTGCACA < 41bp 1 0.0851323113004709 1 0.0467973351478577 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37367167 chr3:37367180 nonsynonymous SNV 0.009 0 34 hm5C_associated_SNPs_45807 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:37367160-37367200
64251 chr15 39876523 39876523 1 + C T UCEC 39876541 + 39876521 39876561 41 GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG GGTCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG < 41bp 1 0.199568137163827 1 0.379682272672653 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876541 chr15:39876523 nonsynonymous SNV 0.992 0 3 hm5C_associated_SNPs_45808 0 0 2 BUD13 POSTAR2 ENCODE chr15:39876508-39876550
64251 chr2 135160677 135160677 1 + G A UCEC 135160666 + 135160646 135160686 41 TACGTGAAAAACCATGGTATCCTCAGTGGACGGGACCTGCA TACGTGAAAAACCATGGTATCCTCAGTGGACAGGACCTGCA < 41bp 1 0.199639659230959 1 0.067219078540802 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135160666 chr2:135160677 nonsynonymous SNV 0.978 3 32 hm5C_associated_SNPs_45811 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:135160659-135160684
64251 chr17 36508881 36508881 1 + G A UCEC 36508864 + 36508844 36508884 41 AGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAG AGAGCTGGCTGCTTCAGCTGCGAGCCTGACAGACATGAGAG < 41bp 1 0.45773419233511 1 0.401047348976135 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508864 chr17:36508881 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_45812 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:36508875-36508905
64251 chr17 36508881 36508881 1 + G A UCEC 36508869 + 36508849 36508889 41 TGGCTGCTTCAGCTGCGAGCCTGACAGACATGGGAGGCTCT TGGCTGCTTCAGCTGCGAGCCTGACAGACATGAGAGGCTCT < 41bp 1 0.120734706620388 1 0.137900084257126 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SOCS7 ENSG00000174111 CDS Human other chr17:36508869 chr17:36508881 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_45813 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:36508875-36508905
64251 chr19 49967978 49967978 1 + T C UCEC 49967998 + 49967978 49968018 41 TGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA CGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCA < 41bp 1 0.553076360367665 1 0.588594496250153 experiment 0.89384727926467 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALDH16A1 ENSG00000161618 CDS Human protein_coding chr19:49967998 chr19:49967978 synonymous SNV . 0 1 hm5C_associated_SNPs_45814 0 0 2 DDX24 POSTAR2 ENCODE chr19:49967976-49968019
64251 chr7 36445879 36445879 1 + G A UCEC 36445868 + 36445848 36445888 41 CCCTCCCAGACCTCTGCTTTCAAATGCCTCGGCAACTCCAG CCCTCCCAGACCTCTGCTTTCAAATGCCTCGACAACTCCAG < 41bp 1 0.557778359372264 1 0.478291302919388 experiment 0.884443281255472 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANLN ENSG00000011426 CDS Human protein_coding chr7:36445868 chr7:36445879 nonsynonymous SNV 0.087 2 32 hm5C_associated_SNPs_45815 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr1 154303954 154303954 1 + G A UCEC 154303952 + 154303932 154303972 41 AGCGATAACCAGGTGAATAACCGCCAGTCTCAGGTGCTGAT AGCGATAACCAGGTGAATAACCACCAGTCTCAGGTGCTGAT < 41bp 1 0.100535375804722 1 0.0653940439224243 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP8B2 ENSG00000143515 CDS Human protein_coding chr1:154303952 chr1:154303954 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_45816 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:154303943-154303970
64251 chr1 155288058 155288058 1 + G A UCEC 155288044 + 155288024 155288064 41 TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTGAACCTG TGAAGCTCTATTGCCGGGAGCAGCCCTATTACCTAAACCTG < 41bp 1 0.243416102730994 1 0.203077048063278 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FDPS ENSG00000160752 CDS Human protein_coding chr1:155288044 chr1:155288058 synonymous SNV . 0 35 hm5C_associated_SNPs_45817 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155288026-155288083
64251 chr17 28958939 28958939 1 + G A UCEC 28958929 + 28958909 28958949 41 TGGGAGTGAGCAGCTAGACACCAATGACGAGAGTGATGTTA TGGGAGTGAGCAGCTAGACACCAATGACGAAAGTGATGTTA < 41bp 1 0.144029878550097 1 0.0642244815826416 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28958929 chr17:28958939 . . 0 31 hm5C_associated_SNPs_45818 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:28958939-28958962
64251 chrX 70517257 70517257 1 + G T UCEC 70517240 + 70517220 70517260 41 TTTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGAT TTTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGATGAT < 41bp 1 0.147198106363668 1 0.23172590136528 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517240 chrX:70517257 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_45819 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517257 70517257 1 + G T UCEC 70517241 + 70517221 70517261 41 TTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGAGGATG TTTTAGATTTGATGAGGCGCCAAGAAGAACTTCGGATGATG < 41bp 1 0.681719997962007 1 0.20798197388649 experiment 0.636560004075986 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout NONO ENSG00000147140 CDS Human protein_coding chrX:70517241 chrX:70517257 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_45820 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chrX 70517257 70517257 1 + G T UCEC 70517253 + 70517233 70517273 41 TGAGGCGCCAAGAAGAACTTCGGAGGATGGAAGAGCTGCAC TGAGGCGCCAAGAAGAACTTCGGATGATGGAAGAGCTGCAC < 41bp 1 0.455320794528122 1 0.726439476013184 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517253 chrX:70517257 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_45821 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70517220-70517259
64251 chr5 138658570 138658570 1 + G A UCEC 138658571 + 138658551 138658591 41 TGCTAATTTAGGTGATGTGGCTTCTGATGGGAAAAAGGAAC TGCTAATTTAGGTGATGTGACTTCTGATGGGAAAAAGGAAC < 41bp 1 0.2102832591811 1 0.0449237525463104 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MATR3 ENSG00000015479 CDS Human protein_coding chr5:138658571 chr5:138658570 nonsynonymous SNV 0.916 0 20 hm5C_associated_SNPs_45826 0 0 44 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:138658426-138658650
64251 chr17 78087039 78087039 1 + G C UCEC 78087058 + 78087038 78087078 41 AGCGAGCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT ACCGAGCCGGCCCAGCAGGCCATGAGGAAGGCCCTCACCCT < 41bp 1 0.688507765605486 1 0.300926029682159 experiment 0.622984468789028 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAA ENSG00000171298 CDS Human protein_coding chr17:78087058 chr17:78087039 nonsynonymous SNV 0.958 4 2 hm5C_associated_SNPs_45827 0 0 2 SND1 POSTAR2 ENCODE chr17:78087016-78087070
64251 chr6 109763765 109763765 1 + G A UCEC 109763767 + 109763747 109763787 41 TCCATGCCGAATACAATCGACAGAAGGACATCTACCTAGCA TCCATGCCGAATACAATCAACAGAAGGACATCTACCTAGCA < 41bp 1 0.591712591658636 1 0.458701401948929 experiment 0.816574816682728 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109763767 chr6:109763765 nonsynonymous SNV 0.337 4 19 hm5C_associated_SNPs_45828 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr6:109763757-109763795
64251 chr4 48384653 48384653 1 + C T UCEC 48384660 + 48384640 48384680 41 CAATTCTACAAGACGGGGTACTTTTAGTGATCAGGAACTTG CAATTCTACAAGATGGGGTACTTTTAGTGATCAGGAACTTG < 41bp 1 0.0224295723001034 1 0.0167497098445892 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384660 chr4:48384653 nonsynonymous SNV 0.997 4 14 hm5C_associated_SNPs_45830 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:48384639-48384654
64251 chr17 41585003 41585003 1 + G A UCEC 41585007 + 41584987 41585027 41 GATCATCATGTTGGACGAGGCACATGAGAGGACAATTCACA GATCATCATGTTGGACAAGGCACATGAGAGGACAATTCACA < 41bp 1 0.317367580733533 1 0.17764738202095 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585007 chr17:41585003 nonsynonymous SNV 0.308 3 17 hm5C_associated_SNPs_45831 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:41584987-41585012
64251 chr7 2419050 2419050 1 + A G UCEC 2419036 + 2419016 2419056 41 TTTGTCCCCTCAGGGGTGGACACTGACGAGCTGGACAGCAA TTTGTCCCCTCAGGGGTGGACACTGACGAGCTGGGCAGCAA < 41bp 1 0.428582885683165 1 0.0847239196300507 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419036 chr7:2419050 nonsynonymous SNV 1.000 4 35 hm5C_associated_SNPs_45832 0 0 22 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:2419020-2419060
64251 chr7 2419050 2419050 1 + A G UCEC 2419038 + 2419018 2419058 41 TGTCCCCTCAGGGGTGGACACTGACGAGCTGGACAGCAACG TGTCCCCTCAGGGGTGGACACTGACGAGCTGGGCAGCAACG < 41bp 1 0.462048055446428 1 0.0488315522670746 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419038 chr7:2419050 nonsynonymous SNV 1.000 4 33 hm5C_associated_SNPs_45833 0 0 22 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:2419020-2419060
64251 chr7 2419050 2419050 1 + A G UCEC 2419051 + 2419031 2419071 41 GTGGACACTGACGAGCTGGACAGCAACGTGGACGACTGGGA GTGGACACTGACGAGCTGGGCAGCAACGTGGACGACTGGGA < 41bp 1 0.691100235743268 1 0.308981359004974 experiment 0.617799528513463 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2419051 chr7:2419050 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_45834 0 0 22 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:2419020-2419060
64251 chr19 46025462 46025462 1 + G A UCEC 46025467 + 46025447 46025487 41 GCACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGA GCACATAGAGCGCCGAGTCTCCAATGCAGGTGATGCTCAGA < 41bp 1 0.204769297360263 1 0.404457092285156 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025467 chr19:46025462 synonymous SNV . 0 16 hm5C_associated_SNPs_45836 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr19 46025462 46025462 1 + G A UCEC 46025468 + 46025448 46025488 41 CACATAGAGCGCCGGGTCTCCAATGCAGGTGATGCTCAGAT CACATAGAGCGCCGAGTCTCCAATGCAGGTGATGCTCAGAT < 41bp 1 0.303054152924071 1 0.359345525503159 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VASP ENSG00000125753 CDS Human protein_coding chr19:46025468 chr19:46025462 synonymous SNV . 0 15 hm5C_associated_SNPs_45837 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chrX 73042043 73042043 1 - A G UCEC 73042026 - 73042006 73042046 41 CCCTCATGAAAAATGACTGACCACTGCTGGGCAGCAGGAGG CCCCCATGAAAAATGACTGACCACTGCTGGGCAGCAGGAGG < 41bp 1 0.0606227326637094 1 0.164221853017807 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73042026 chrX:73042043 . . 0 4 hm5C_associated_SNPs_45838 0 0 53 PTBP1 POSTAR2 GSE57278,GSM1486177 chrX:73040480-73042460
64251 chr10 102112174 102112174 1 + G A UCEC 102112188 + 102112168 102112208 41 CTCATCGTCTGTGGAGCCACCGCTCTTACAAAGCTCGGCTG CTCATCATCTGTGGAGCCACCGCTCTTACAAAGCTCGGCTG < 41bp 1 0.410396960768082 1 0.744503617286682 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SCD ENSG00000099194 CDS Human protein_coding chr10:102112188 chr10:102112174 nonsynonymous SNV 0.462 4 7 hm5C_associated_SNPs_45839 0 0 28 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:102112160-102112180
64251 chr3 9854718 9854718 1 + G A UCEC 9854727 + 9854707 9854747 41 GATGGTCCATCGCTCAGGCCCCACCCTGCTGCCACCCCAGA GATGGTCCATCACTCAGGCCCCACCCTGCTGCCACCCCAGA < 41bp 1 0.0610620254553295 1 0.0436374545097351 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ARPC4-TTLL3;TTLL3 ENSG00000214021;ENSG00000250151 CDS Human other chr3:9854727 chr3:9854718 nonsynonymous SNV 0.001 0 12 hm5C_associated_SNPs_45840 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:9854718-9854719
64251 chr11 6629288 6629288 1 + C T UCEC 6629293 + 6629273 6629313 41 AAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCC AAGGGACGATCATGGTTTCTCCCCCTTGCACTGGGCCTGCC < 41bp 1 0.28325204738743 1 0.554110288619995 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629293 chr11:6629288 synonymous SNV . 0 16 hm5C_associated_SNPs_45841 0 0 1 FXR2 POSTAR2 ENCODE chr11:6629275-6629371
64251 chr11 6629288 6629288 1 + C T UCEC 6629294 + 6629274 6629314 41 AGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCG AGGGACGATCATGGTTTCTCCCCCTTGCACTGGGCCTGCCG < 41bp 1 0.196745568555617 1 0.0900666415691376 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ILK ENSG00000166333 CDS Human protein_coding chr11:6629294 chr11:6629288 synonymous SNV . 0 15 hm5C_associated_SNPs_45842 0 0 1 FXR2 POSTAR2 ENCODE chr11:6629275-6629371
64251 chr5 5457692 5457692 1 + C T UCEC 5457687 + 5457667 5457707 41 AGGTTTTAGTACAAAGTCATCGTGACGGTGGTAGTACTGAA AGGTTTTAGTACAAAGTCATCGTGATGGTGGTAGTACTGAA < 41bp 1 0.45420935730848 1 0.409289360046387 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICE1 ENSG00000164151 CDS Human protein_coding chr5:5457687 chr5:5457692 synonymous SNV . 0 26 hm5C_associated_SNPs_45843 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:5457678-5457717
64251 chrX 48457247 48457247 1 + C T UCEC 48457256 + 48457236 48457276 41 GGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCCGAG GGGGGCAGCTGTTGGGCCAGCGCTACGGGCCCCTCTCCGAG < 41bp 1 0.711266725988622 1 0.521912097930908 experiment 0.577466548022756 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457256 chrX:48457247 synonymous SNV . 0 12 hm5C_associated_SNPs_45844 0 0 3 PPIG POSTAR2 ENCODE chrX:48457240-48457280
64251 chr17 25904582 25904582 1 + C T UCEC 25904584 + 25904564 25904604 41 AGGCCAAGGTGAAGGAGACGCTGCGGCGCTGTGGGGCCAGC AGGCCAAGGTGAAGGAGATGCTGCGGCGCTGTGGGGCCAGC < 41bp 1 0.740580079900534 1 0.426931262016296 experiment 0.518839840198932 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KSR1 ENSG00000141068 CDS Human protein_coding chr17:25904584 chr17:25904582 nonsynonymous SNV 0.971 1 19 hm5C_associated_SNPs_45850 0 0 6 DDX24 POSTAR2 ENCODE chr17:25904572-25904666
64251 chr21 46931088 46931088 1 + G A UCEC 46931104 + 46931084 46931124 41 GCCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC GCCCAGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCC < 41bp 1 0.0530393628263612 1 0.111429274082184 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931104 chr21:46931088 nonsynonymous SNV 0.071 3 5 hm5C_associated_SNPs_45851 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr21 46931088 46931088 1 + G A UCEC 46931105 + 46931085 46931125 41 CCCGGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT CCCAGGGCACGCATCTTCTCCTTTGACGGCAAGGACGTCCT < 41bp 1 0.0689193830849104 1 0.0468246936798096 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46931105 chr21:46931088 nonsynonymous SNV 0.071 3 4 hm5C_associated_SNPs_45852 0 0 1 SF3B1 POSTAR2 ENCODE chr21:46931077-46931106
64251 chr17 79663962 79663962 1 + G A UCEC 79663977 + 79663957 79663997 41 TGCACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGC TGCACAGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGC < 41bp 1 0.557163102069552 1 0.5112025141716 experiment 0.885673795860896 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663977 chr17:79663962 nonsynonymous SNV 0.016 0 6 hm5C_associated_SNPs_45853 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr17 79663962 79663962 1 + G A UCEC 79663980 + 79663960 79664000 41 ACGGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGCCCC ACAGCGTGTACATGAGCCAGCCGGCCCCTGCCGCTGGCCCC < 41bp 1 0.3733768026242 1 0.387857884168625 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79663980 chr17:79663962 nonsynonymous SNV 0.016 0 3 hm5C_associated_SNPs_45854 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79663944-79663999
64251 chr14 105927182 105927182 1 + C T UCEC 105927186 + 105927166 105927206 41 TGCCGCAGGGCGGGCCCGTGCTCTGCAGGGACGAGATGGAG TGCCGCAGGGCGGGCCTGTGCTCTGCAGGGACGAGATGGAG < 41bp 1 0.518085879972473 1 0.199661523103714 experiment 0.963828240055054 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927186 chr14:105927182 synonymous SNV . 0 17 hm5C_associated_SNPs_45855 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:105927159-105927183
64251 chr3 47041793 47041793 1 + C T UCEC 47041773 + 47041753 47041793 41 TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTC TCCTTCGCCACTGGATGGGCCGCGGCCCTTTCCTGCTGCTT < 41bp 1 0.320911609374677 1 0.48270919919014 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control NBEAL2 ENSG00000160796 CDS Human protein_coding chr3:47041773 chr3:47041793 nonsynonymous SNV 0.087 0 41 hm5C_associated_SNPs_45856 0 0 4 RBM15 POSTAR2 GSE78030,GSM2064710 chr3:47041780-47041800
64251 chr19 18960992 18960992 1 + C T UCEC 18961004 + 18960984 18961024 41 TGTCGCAACGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC TGTCGCAATGTCTTCCTCCTCGGCTTCATCCCGGCCAAAGC < 41bp 1 0.601649318487431 1 0.84890204668045 experiment 0.796701363025137 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961004 chr19:18960992 synonymous SNV . 0 9 hm5C_associated_SNPs_45857 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:18960960-18961000
64251 chr11 125513701 125513701 1 + C T UCEC 125513690 + 125513670 125513710 41 TTTGTTTTCTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTT TTTGTTTTCTTTTTTAGGGGCAAAAAGGCCCTGAGTCACTT < 41bp 1 0.405062275239521 1 0.27319073677063 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513690 chr11:125513701 stopgain 0.996 0 32 hm5C_associated_SNPs_45858 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513701 125513701 1 + C T UCEC 125513698 + 125513678 125513718 41 CTTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGT CTTTTTTAGGGGCAAAAAGGCCCTGAGTCACTTCAGGTGGT < 41bp 1 0.13303785512191 1 0.186926245689392 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513698 chr11:125513701 stopgain 0.996 0 24 hm5C_associated_SNPs_45859 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513701 125513701 1 + C T UCEC 125513699 + 125513679 125513719 41 TTTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTG TTTTTTAGGGGCAAAAAGGCCCTGAGTCACTTCAGGTGGTG < 41bp 1 0.371423849725464 1 0.18227207660675 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513699 chr11:125513701 stopgain 0.996 0 23 hm5C_associated_SNPs_45860 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr11 125513701 125513701 1 + C T UCEC 125513700 + 125513680 125513720 41 TTTTTAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGT TTTTTAGGGGCAAAAAGGCCCTGAGTCACTTCAGGTGGTGT < 41bp 1 0.274133184770787 1 0.0893861949443817 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125513700 chr11:125513701 stopgain 0.996 0 22 hm5C_associated_SNPs_45861 0 0 4 U2AF1 POSTAR2 ENCODE chr11:125513681-125513734
64251 chr20 35866809 35866809 1 + G A UCEC 35866808 + 35866788 35866828 41 CCTCTTTCCTTTGGCAGGATCGCTGCAGAGCAGAGCAGTAG CCTCTTTCCTTTGGCAGGATCACTGCAGAGCAGAGCAGTAG < 41bp 1 0.252979479048282 1 0.101587027311325 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35866808 chr20:35866809 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_45863 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35866786-35866824
64251 chr8 21844756 21844756 1 + A G UCEC 21844767 + 21844747 21844787 41 GTAAGATCTACATTGGGGACCAAGTGCAGAAATCCTCTAAG GTAAGATCTGCATTGGGGACCAAGTGCAGAAATCCTCTAAG < 41bp 1 0.393761719078187 1 0.623611330986023 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844767 chr8:21844756 nonsynonymous SNV 1.000 4 10 hm5C_associated_SNPs_45864 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:21844714-21844757
64251 chr11 75277419 75277419 1 + G A UCEC 75277402 + 75277382 75277422 41 CCACTTCCTGGCCATGCGCTCCCTCCTGCTTCTCAGCGCCT CCACTTCCTGGCCATGCGCTCCCTCCTGCTTCTCAGCACCT < 41bp 1 0.040233858979062 1 0.0284769833087921 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277402 chr11:75277419 nonsynonymous SNV 0.005 0 38 hm5C_associated_SNPs_45865 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:75277392-75277430
64251 chr11 75277419 75277419 1 + G A UCEC 75277406 + 75277386 75277426 41 TTCCTGGCCATGCGCTCCCTCCTGCTTCTCAGCGCCTTCTG TTCCTGGCCATGCGCTCCCTCCTGCTTCTCAGCACCTTCTG < 41bp 1 0.266141619802324 1 0.159561038017273 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277406 chr11:75277419 nonsynonymous SNV 0.005 0 34 hm5C_associated_SNPs_45866 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:75277392-75277430
64251 chr20 31024475 31024475 1 + G A UCEC 31024479 + 31024459 31024499 41 AGCGCCCCAGGCCTGCGGACCCGATGCCTCTTCCTGCTGAG AGCGCCCCAGGCCTGCAGACCCGATGCCTCTTCCTGCTGAG < 41bp 1 0.127279425958538 1 0.102092623710632 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024479 chr20:31024475 synonymous SNV . 0 17 hm5C_associated_SNPs_45867 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:31024458-31024492
64251 chr13 100920957 100920957 1 + A G UCEC 100920958 + 100920938 100920978 41 TTCAGGTTCTAGGTGATAAACATGGGAATGCTTTATGGCTT TTCAGGTTCTAGGTGATAAGCATGGGAATGCTTTATGGCTT < 41bp 1 0.465386105044442 1 0.404849469661713 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCCA ENSG00000175198 CDS Human protein_coding chr13:100920958 chr13:100920957 synonymous SNV . 0 20 hm5C_associated_SNPs_45868 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr13:100920938-100920959
64251 chr19 2226640 2226640 1 + G A UCEC 2226642 + 2226622 2226662 41 CTGAGCAAGAGGCAGCTGGACGGCCTGGCTGGGCTGAAGGG CTGAGCAAGAGGCAGCTGAACGGCCTGGCTGGGCTGAAGGG < 41bp 1 0.277807333514769 1 0.280693113803864 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DOT1L ENSG00000104885 CDS Human protein_coding chr19:2226642 chr19:2226640 nonsynonymous SNV 0.116 1 19 hm5C_associated_SNPs_45869 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:2226626-2226657
64251 chr17 43220894 43220894 1 + G A UCEC 43220912 + 43220892 43220932 41 TCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG TCATCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAG < 41bp 1 0.390319683575975 1 0.844249069690704 experiment 1 Functional Loss 31061524;GSE122264;BS-seq with improved protocol;Heart;Control ACBD4 ENSG00000181513 CDS Human protein_coding chr17:43220912 chr17:43220894 nonsynonymous SNV 0.983 0 3 hm5C_associated_SNPs_45870 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43220869-43220917
64251 chr20 62562233 62562233 1 + G A UCEC 62562230 + 62562210 62562250 41 TTTGTCTTCTGCGGCCTCCTCACGTGCTGCTACTGCTGCTG TTTGTCTTCTGCGGCCTCCTCACATGCTGCTACTGCTGCTG < 41bp 1 0.435484054798577 1 0.428897887468338 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJC5 ENSG00000101152 CDS Human protein_coding chr20:62562230 chr20:62562233 synonymous SNV . 0 24 hm5C_associated_SNPs_45872 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:62562200-62562240
64251 chr21 45400944 45400944 1 + G A UCEC 45400940 + 45400920 45400960 41 GTTTAAGCCTGCCCGGAGGCCGTGGACCCTCCTGAACTTCC GTTTAAGCCTGCCCGGAGGCCGTGAACCCTCCTGAACTTCC < 41bp 1 0.543732276045255 1 0.228305041790009 experiment 0.912535447909491 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGPAT3 ENSG00000160216 CDS Human protein_coding chr21:45400940 chr21:45400944 stopgain 0.934 1 25 hm5C_associated_SNPs_45873 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:45400926-45400952
64251 chr19 10561581 10561581 1 + G A UCEC 10561575 + 10561555 10561595 41 TGTCTGGAGCAGCTGGAGACCATGCAGACCTATCGCTCTGT TGTCTGGAGCAGCTGGAGACCATGCAAACCTATCGCTCTGT < 41bp 1 0.214857435543569 1 0.44240140914917 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE4A ENSG00000065989 CDS Human protein_coding chr19:10561575 chr19:10561581 synonymous SNV . 0 27 hm5C_associated_SNPs_45874 0 0 3 UCHL5 POSTAR2 ENCODE chr19:10561533-10561613
64251 chr8 41355102 41355102 1 + C T UCEC 41355103 + 41355083 41355123 41 AAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGT AAGCAGAGAAGCTCGGCGGTCAGTCATATCTCGAAGGTTGT < 41bp 1 0.173211925604444 1 0.109503954648972 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355103 chr8:41355102 synonymous SNV . 0 20 hm5C_associated_SNPs_45875 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:41355086-41355106
64251 chr1 230379169 230379169 1 + C T UCEC 230379152 + 230379132 230379172 41 AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGCGGA AATGAGCACTGGCTGGAGCCCCTCCTGGAAAGGGTGGTGGA < 41bp 1 0.0669520406048379 1 0.11726787686348 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230379152 chr1:230379169 nonsynonymous SNV 0.667 1 38 hm5C_associated_SNPs_45876 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:230379147-230379171
64251 chr1 145663174 145663174 1 + G T UCEC 145663167 + 145663147 145663187 41 GGTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTT GGTCTTTACTAGCTTTGGGGCCATTTGTATCACACGATGTT < 41bp 1 0.0218647505549447 1 0.0291571617126465 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RNF115 ENSG00000121848 CDS Human other chr1:145663167 chr1:145663174 nonsynonymous SNV . 0 28 hm5C_associated_SNPs_45878 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr1 145663174 145663174 1 + G T UCEC 145663168 + 145663148 145663188 41 GTCTTTACTAGCTTTGGGGCCATTTGGATCACACGATGTTT GTCTTTACTAGCTTTGGGGCCATTTGTATCACACGATGTTT < 41bp 1 0.0296107914315308 1 0.0640210807323456 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RNF115 ENSG00000121848 CDS Human other chr1:145663168 chr1:145663174 nonsynonymous SNV . 0 27 hm5C_associated_SNPs_45879 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:145663161-145663181
64251 chr16 90028247 90028247 1 + A G UCEC 90028230 + 90028210 90028250 41 TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAA TGGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACGCAA < 41bp 1 0.435097133237966 1 0.246587455272675 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028230 chr16:90028247 nonsynonymous SNV 0.905 0 38 hm5C_associated_SNPs_45880 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:90028234-90028261
64251 chr16 90028247 90028247 1 + A G UCEC 90028231 + 90028211 90028251 41 GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACACAAC GGAACGACCTGGCTGTGATCCCTGCACGCGTTGTACGCAAC < 41bp 1 0.122026839441194 1 0.486598938703537 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028231 chr16:90028247 nonsynonymous SNV 0.905 0 37 hm5C_associated_SNPs_45881 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:90028234-90028261
64251 chr1 10381845 10381845 1 + G A UCEC 10381855 + 10381835 10381875 41 ACTTCATTACGGGACTTACTCTGGGGCAATGCCGTGTACCT ACTTCATTACAGGACTTACTCTGGGGCAATGCCGTGTACCT < 41bp 1 0.763296300956189 1 0.949921369552612 experiment 0.473407398087622 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF1B ENSG00000054523 CDS Human protein_coding chr1:10381855 chr1:10381845 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_45883 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:10381822-10381845
64251 chr19 34959962 34959962 1 + G A UCEC 34959978 + 34959958 34959998 41 TGACGTTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA TGACATTCTCATAGTTGATTCAGATGAAGAAGATTCTTCAA < 41bp 1 0.442477231690548 1 0.190346479415894 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBA2 ENSG00000126261 CDS Human protein_coding chr19:34959978 chr19:34959962 nonsynonymous SNV 0.984 1 5 hm5C_associated_SNPs_45884 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:34959942-34959970
64251 chr15 72855817 72855817 1 + G A UCEC 72855834 + 72855814 72855854 41 TTCGCTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT TTCACTGCAAATGTGGGCGCCAATTTTGGTAAGCAAGTGAT < 41bp 1 0.0628106199966617 1 0.125126212835312 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72855834 chr15:72855817 nonsynonymous SNV 1.000 1 4 hm5C_associated_SNPs_45886 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr15:72855786-72855837
64251 chr19 39215146 39215146 1 + C T UCEC 39215157 + 39215137 39215177 41 GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT GAGCACCTGTGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT < 41bp 1 0.76228766020584 1 0.883025348186493 experiment 0.475424679588319 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215157 chr19:39215146 nonsynonymous SNV 0.998 3 10 hm5C_associated_SNPs_45889 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr19 39215146 39215146 1 + C T UCEC 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGTGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC < 41bp 1 0.307966762205892 1 0.709546387195587 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215146 nonsynonymous SNV 0.998 3 4 hm5C_associated_SNPs_45890 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr1 161134340 161134340 1 + G A UCEC 161134359 + 161134339 161134379 41 CGGCAGAAAACTCGAAGTACCAAAAAGTTGACAGTACAAAG CAGCAGAAAACTCGAAGTACCAAAAAGTTGACAGTACAAAG < 41bp 1 0.423318313263539 1 0.414675414562225 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP21 ENSG00000143258 CDS Human protein_coding chr1:161134359 chr1:161134340 nonsynonymous SNV 1.000 2 2 hm5C_associated_SNPs_45891 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:161134340-161134360
64251 chr1 156105717 156105717 1 + G A UCEC 156105721 + 156105701 156105741 41 AAGGAGGCGAAGCTTCGAGACCTGGAGGACTCACTGGCCCG AAGGAGGCGAAGCTTCAAGACCTGGAGGACTCACTGGCCCG < 41bp 1 0.413259732005415 1 0.460228234529495 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105721 chr1:156105717 nonsynonymous SNV 0.997 3 17 hm5C_associated_SNPs_45892 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:156105704-156105733
64251 chr1 156105717 156105717 1 + G A UCEC 156105730 + 156105710 156105750 41 AAGCTTCGAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA AAGCTTCAAGACCTGGAGGACTCACTGGCCCGTGAGCGGGA < 41bp 1 0.260562288495845 1 0.164394348859787 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LMNA ENSG00000160789 CDS Human protein_coding chr1:156105730 chr1:156105717 nonsynonymous SNV 0.997 3 8 hm5C_associated_SNPs_45893 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:156105704-156105733
64251 chr3 49568297 49568297 1 + A G UCEC 49568306 + 49568286 49568326 41 CCACACCCTGGAGGGCCTCCCCCTTGACACTGATAAGGGTG CCACACCCTGGGGGGCCTCCCCCTTGACACTGATAAGGGTG < 41bp 1 0.245931512157135 1 0.321514666080475 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568306 chr3:49568297 nonsynonymous SNV 0.971 3 12 hm5C_associated_SNPs_45894 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:49568256-49568311
64251 chr10 51582892 51582892 1 + G A UCEC 51582890 + 51582870 51582910 41 AGCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTA AGCTCCTTACATACCCAGCACCAACCCCCAGGACTGGCTTA < 41bp 1 0.0415874043372268 1 0.0394658148288727 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582890 chr10:51582892 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_45895 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:51582864-51582893
64251 chr10 51582892 51582892 1 + G A UCEC 51582891 + 51582871 51582911 41 GCTCCTTACATACCCAGCACCGACCCCCAGGACTGGCTTAC GCTCCTTACATACCCAGCACCAACCCCCAGGACTGGCTTAC < 41bp 1 0.170519190390019 1 0.0695391297340393 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582891 chr10:51582892 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_45896 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:51582864-51582893
64251 chr10 51582892 51582892 1 + G A UCEC 51582895 + 51582875 51582915 41 CTTACATACCCAGCACCGACCCCCAGGACTGGCTTACCCAA CTTACATACCCAGCACCAACCCCCAGGACTGGCTTACCCAA < 41bp 1 0.673848501897225 1 0.317480623722076 experiment 0.652302996205551 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NCOA4 ENSG00000138293 CDS Human other chr10:51582895 chr10:51582892 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_45897 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:51582864-51582893
64251 chr13 76415806 76415806 1 + C T UCEC 76415812 + 76415792 76415832 41 TGTCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAA TGTCTCTGACCACATGGGAGCCCTCTCTTGCCACCTGGGAA < 41bp 1 0.0340248796454738 1 0.0412544906139374 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415812 chr13:76415806 nonsynonymous SNV 0.867 3 15 hm5C_associated_SNPs_45899 0 0 1 GRWD1 POSTAR2 ENCODE chr13:76415761-76415881
64251 chr13 76415806 76415806 1 + C T UCEC 76415814 + 76415794 76415834 41 TCTCTGACCACACGGGAGCCCTCTCTTGCCACCTGGGAAGC TCTCTGACCACATGGGAGCCCTCTCTTGCCACCTGGGAAGC < 41bp 1 0.217096279017568 1 0.180630505084991 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76415814 chr13:76415806 nonsynonymous SNV 0.867 3 13 hm5C_associated_SNPs_45900 0 0 1 GRWD1 POSTAR2 ENCODE chr13:76415761-76415881
64251 chr18 48604724 48604724 1 + C G UCEC 48604710 + 48604690 48604730 41 TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGACAGAGCA TTTTGTGAAAGGCTGGGGACCGGATTACCCAAGAGAGAGCA < 41bp 1 0.449544642591805 1 0.625366270542145 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604710 chr18:48604724 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_45901 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:48604684-48604726
64251 chr7 44802552 44802552 1 + C T UCEC 44802539 + 44802519 44802559 41 GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGCGCCTCCT GTCCGCTCGGTGCTGCAGGGCCTCCTCAAAAAGTGCCTCCT < 41bp 1 0.0302035923725554 1 0.0332789123058319 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802539 chr7:44802552 nonsynonymous SNV 0.992 4 34 hm5C_associated_SNPs_45902 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:44802548-44802578
64251 chr17 30806297 30806297 1 + G A UCEC 30806305 + 30806285 30806325 41 GGGCAGAGCTCCGGGATGACCCAATCATCAGCACACACTTG GGGCAGAGCTCCAGGATGACCCAATCATCAGCACACACTTG < 41bp 1 0.165114892806962 1 0.211541950702667 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30806305 chr17:30806297 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_45903 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:30806159-30806304
64251 chr1 957741 957741 1 + C T UCEC 957724 + 957704 957744 41 ACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACCCCC ACTGGGGACACCAGGATCTTCTTTGTGAACCCTGCACTCCC < 41bp 1 0.165882523113728 1 0.0650539100170135 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957724 chr1:957741 nonsynonymous SNV 0.736 1 38 hm5C_associated_SNPs_45905 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:957740-957760
64251 chr1 957741 957741 1 + C T UCEC 957744 + 957724 957764 41 CTTTGTGAACCCTGCACCCCCATACCTGTGGCCAGCCCACA CTTTGTGAACCCTGCACTCCCATACCTGTGGCCAGCCCACA < 41bp 1 0.0629322952732287 1 0.194223552942276 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGRN ENSG00000188157 CDS Human protein_coding chr1:957744 chr1:957741 nonsynonymous SNV 0.736 1 18 hm5C_associated_SNPs_45906 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:957740-957760
64251 chr7 91981900 91981900 1 + C T UCEC 91981887 + 91981867 91981907 41 AGGGTCAAATACATCTGGATCTGATACACTCAGCTTCCCAT AGGGTCAAATACATCTGGATCTGATACACTCAGTTTCCCAT < 41bp 1 0.255194399085134 1 0.0437774062156677 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91981887 chr7:91981900 synonymous SNV . 0 34 hm5C_associated_SNPs_45907 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:91981889-91981914
64251 chr12 51117078 51117078 1 + C T UCEC 51117087 + 51117067 51117107 41 CCTCACGGCCACGCTGCCCACTGTCCGAATGATTGTTGATG CCTCACGGCCATGCTGCCCACTGTCCGAATGATTGTTGATG < 41bp 1 0.0902602636170286 1 0.064265251159668 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DIP2B ENSG00000066084 CDS Human protein_coding chr12:51117087 chr12:51117078 nonsynonymous SNV 0.600 4 12 hm5C_associated_SNPs_45908 0 0 2 FXR2 POSTAR2 ENCODE chr12:51117018-51117079
64251 chr5 454099 454099 1 + G A UCEC 454080 + 454060 454100 41 ATGTACCACCAAGCCCTGAGCACGCGGATGCAGGACCTCGC ATGTACCACCAAGCCCTGAGCACGCGGATGCAGGACCTCAC < 41bp 1 0.617453911214753 1 0.350242555141449 experiment 0.765092177570494 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC3 ENSG00000180104 CDS Human protein_coding chr5:454080 chr5:454099 nonsynonymous SNV 0.017 1 40 hm5C_associated_SNPs_45909 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:454060-454100
64251 chr16 57243050 57243050 1 + G A UCEC 57243043 + 57243023 57243063 41 GAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATA GAGTTATTCCACTGGAAGATCCACTGGAACCAGCTGTTATA < 41bp 1 0.136164988852317 1 0.0704048275947571 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57243043 chr16:57243050 nonsynonymous SNV 0.997 4 28 hm5C_associated_SNPs_45911 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:57243040-57243058
64251 chr19 42848894 42848894 1 + C T UCEC 42848907 + 42848887 42848927 41 TTCGTCACGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT TTCGTCATGTCCCTGGAGGCCTGCGTCACCCAGAGCTTCCT < 41bp 1 0.339031760214796 1 0.166937291622162 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MEGF8 ENSG00000105429 CDS Human protein_coding chr19:42848907 chr19:42848894 nonsynonymous SNV 0.525 3 8 hm5C_associated_SNPs_45912 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42848867-42848905
64251 chr6 31914156 31914156 1 + C G UCEC 31914162 + 31914142 31914182 41 CTCTTCAGGTGTGACCACCACTCCATGGTCTTTGGCCCGGC CTCTTCAGGTGTGAGCACCACTCCATGGTCTTTGGCCCGGC < 41bp 1 0.719029152947028 1 0.97831130027771 experiment 0.561941694105943 Functional Loss 31061524;GSE122266;BS-seq with improved protocol;Liver;Control CFB ENSG00000243649;ENSG00000244255 CDS Human other chr6:31914162 chr6:31914156 nonsynonymous SNV 0.144 0 15 hm5C_associated_SNPs_45918 0 0 4 DDX3X POSTAR2 ENCODE chr6:31914149-31914165
64251 chr1 110172971 110172971 1 + C T UCEC 110172951 + 110172931 110172971 41 TCCTCAGCTATCACCGGAATCCGCTACCGGAGTACCTGTCC TCCTCAGCTATCACCGGAATCCGCTACCGGAGTACCTGTCT < 41bp 1 0.198017933821046 1 0.243410170078278 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110172951 chr1:110172971 synonymous SNV . 0 41 hm5C_associated_SNPs_45919 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:110172968-110172999
64251 chr12 132546849 132546849 1 + G A UCEC 132546853 + 132546833 132546873 41 CCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGGTAAA CCCCGGCACGGTCTTTAGTGCCCCAAGTGTCCCAAGGTAAA < 41bp 1 0.148998498890017 1 0.0901011228561401 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control EP400 ENSG00000183495 CDS Human protein_coding chr12:132546853 chr12:132546849 synonymous SNV . 0 17 hm5C_associated_SNPs_45921 0 0 3 DDX24 POSTAR2 ENCODE chr12:132546832-132546867
64251 chr19 50339144 50339144 1 + G A UCEC 50339146 + 50339126 50339166 41 CTCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAAC CTCCTGGACCCATCCTTCAGCCCCAGAACCCTGGGGCCAAC < 41bp 1 0.461871281646478 1 0.0750053524971008 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339146 chr19:50339144 nonsynonymous SNV 0.998 3 19 hm5C_associated_SNPs_45922 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339144 50339144 1 + G A UCEC 50339147 + 50339127 50339167 41 TCCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACC TCCTGGACCCATCCTTCAGCCCCAGAACCCTGGGGCCAACC < 41bp 1 0.203189603500984 1 0.043927013874054 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339147 chr19:50339144 nonsynonymous SNV 0.998 3 18 hm5C_associated_SNPs_45923 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339144 50339144 1 + G A UCEC 50339148 + 50339128 50339168 41 CCTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCC CCTGGACCCATCCTTCAGCCCCAGAACCCTGGGGCCAACCC < 41bp 1 0.468284284513947 1 0.0582012534141541 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339148 chr19:50339144 nonsynonymous SNV 0.998 3 17 hm5C_associated_SNPs_45924 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339144 50339144 1 + G A UCEC 50339149 + 50339129 50339169 41 CTGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAACCCT CTGGACCCATCCTTCAGCCCCAGAACCCTGGGGCCAACCCT < 41bp 1 0.421090665764961 1 0.159334570169449 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339149 chr19:50339144 nonsynonymous SNV 0.998 3 16 hm5C_associated_SNPs_45925 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339144 50339144 1 + G A UCEC 50339162 + 50339142 50339182 41 TCGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC TCAGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCC < 41bp 1 0.0166909787634916 1 0.0425904989242554 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339162 chr19:50339144 nonsynonymous SNV 0.998 3 3 hm5C_associated_SNPs_45926 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr19 50339144 50339144 1 + G A UCEC 50339163 + 50339143 50339183 41 CGGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT CAGCCCCAGAACCCTGGGGCCAACCCTCAGCTGCGAAGCCT < 41bp 1 0.103941110145075 1 0.0541350841522217 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control MED25 ENSG00000104973 CDS Human protein_coding chr19:50339163 chr19:50339144 nonsynonymous SNV 0.998 3 2 hm5C_associated_SNPs_45927 0 0 1 PCBP2 POSTAR2 ENCODE chr19:50339122-50339203
64251 chr3 126708568 126708568 1 + C T UCEC 126708579 + 126708559 126708599 41 TCCTGCTACCGTGGTGAGGGCAAGCTCTCCCTGCCGTGGCT TCCTGCTACTGTGGTGAGGGCAAGCTCTCCCTGCCGTGGCT < 41bp 1 0.13353780358216 1 0.375635117292404 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PLXNA1 ENSG00000114554 CDS Human protein_coding chr3:126708579 chr3:126708568 nonsynonymous SNV 0.824 4 10 hm5C_associated_SNPs_45929 0 0 2 FBL POSTAR2 GSE43666,GSM1067864 chr3:126708540-126708578
64251 chr14 94568221 94568221 1 + C T UCEC 94568211 + 94568191 94568231 41 CAGTGCCATGGGCTTCACCTCAGTAGGAATCGCCGCATCCT CAGTGCCATGGGCTTCACCTCAGTAGGAATTGCCGCATCCT < 41bp 1 0.76189110922317 1 0.335590660572052 experiment 0.47621778155366 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568211 chr14:94568221 nonsynonymous SNV 0.020 0 31 hm5C_associated_SNPs_45930 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr11 379647 379647 1 + C T UCEC 379631 + 379611 379651 41 GCCTCCGTGCGCCCCGACGGCCGCCCCGAGCTCTGCCGGCC GCCTCCGTGCGCCCCGACGGCCGCCCCGAGCTCTGCTGGCC < 41bp 1 0.129889446158183 1 0.183403372764587 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:379631 chr11:379647 nonsynonymous SNV 0.825 1 37 hm5C_associated_SNPs_45931 0 0 1 PPIG POSTAR2 ENCODE chr11:379647-379660
64251 chr17 7752796 7752796 1 + C T UCEC 7752799 + 7752779 7752819 41 CTTCTGCCCAGCCCACACCCCCGTCAGCCTCTGTCCCTGGA CTTCTGCCCAGCCCACATCCCCGTCAGCCTCTGTCCCTGGA < 41bp 1 0.0506411864796457 1 0.0782074332237244 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752799 chr17:7752796 nonsynonymous SNV 0.384 1 18 hm5C_associated_SNPs_45932 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:7752751-7752816
64251 chr17 7752796 7752796 1 + C T UCEC 7752800 + 7752780 7752820 41 TTCTGCCCAGCCCACACCCCCGTCAGCCTCTGTCCCTGGAA TTCTGCCCAGCCCACATCCCCGTCAGCCTCTGTCCCTGGAA < 41bp 1 0.322544284295987 1 0.176813989877701 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM6B ENSG00000132510 CDS Human protein_coding chr17:7752800 chr17:7752796 nonsynonymous SNV 0.384 1 17 hm5C_associated_SNPs_45933 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:7752751-7752816
64251 chr7 32598994 32598994 1 + C T UCEC 32598978 + 32598958 32598998 41 AGAGTCTTCCAATTACTGTACAACCTCAAGCTAATACGGGA AGAGTCTTCCAATTACTGTACAACCTCAAGCTAATATGGGA < 41bp 1 0.130765232705118 1 0.069542795419693 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AVL9 ENSG00000105778 CDS Human protein_coding chr7:32598978 chr7:32598994 nonsynonymous SNV 0.280 1 37 hm5C_associated_SNPs_45936 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:32598969-32599002
64251 chr11 44129780 44129780 1 + C T UCEC 44129787 + 44129767 44129807 41 GAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTATCTCAC GAGACAGCACAAGTGATGGCCCAGCTCTCTAGGTATCTCAC < 41bp 1 0.0756532147186773 1 0.0932349562644958 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129787 chr11:44129780 nonsynonymous SNV 0.050 2 14 hm5C_associated_SNPs_45937 0 0 5 SND1 POSTAR2 ENCODE chr11:44129706-44129796
64251 chr6 42996964 42996964 1 + T G UCEC 42996946 + 42996926 42996966 41 CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGTAA CAGGCAAGGACAGGAGACATCTCCCTTTGAGCAAAGAGGAA < 41bp 1 0.422938294186842 1 0.745121896266937 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996946 chr6:42996964 stoploss 0.876 0 39 hm5C_associated_SNPs_45938 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:42996940-42996980
64251 chr17 71231909 71231909 1 + A G UCEC 71231897 + 71231877 71231917 41 CCAGAACAGACAGTGAAGACCTTTCCACTGCCAGCTGTTGG CCAGAACAGACAGTGAAGACCTTTCCACTGCCGGCTGTTGG < 41bp 1 0.0482005344686285 1 0.058421790599823 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71231897 chr17:71231909 synonymous SNV . 0 33 hm5C_associated_SNPs_45939 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:71231891-71231913
64251 chr7 150765106 150765106 1 + G A UCEC 150765104 + 150765084 150765124 41 CACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCG CACGTGGCCTCCCTCTCCTTCCACAGTCTCCTGGAGCTCCG < 41bp 1 0.439506871911639 1 0.315832167863846 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765104 chr7:150765106 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_45940 0 0 3 FXR2 POSTAR2 ENCODE chr7:150765038-150765110
64251 chr7 150765106 150765106 1 + G A UCEC 150765105 + 150765085 150765125 41 ACGTGGCCTCCCTCTCCTTCCGCAGTCTCCTGGAGCTCCGC ACGTGGCCTCCCTCTCCTTCCACAGTCTCCTGGAGCTCCGC < 41bp 1 0.484552156538929 1 0.368933916091919 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150765105 chr7:150765106 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_45941 0 0 3 FXR2 POSTAR2 ENCODE chr7:150765038-150765110
64251 chr6 31605033 31605033 1 + C T UCEC 31605013 + 31604993 31605033 41 ACGCCCTTCTTCCCTTAGGTCCTTCTCTGGCCTCAATTCCC ACGCCCTTCTTCCCTTAGGTCCTTCTCTGGCCTCAATTCCT < 41bp 1 0.0767515168523938 1 0.0389368832111359 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31605013 chr6:31605033 nonsynonymous SNV 0.994 1 41 hm5C_associated_SNPs_45943 0 0 11 PTBP1 POSTAR2 GSE57278,GSM1378377 chr6:31604980-31605040
64251 chr19 46196137 46196137 1 + C T UCEC 46196120 + 46196100 46196140 41 GCGTTCTACACCATTTGGAGCGGCTGGCACCGCAGGACTGA GCGTTCTACACCATTTGGAGCGGCTGGCACCGCAGGATTGA < 41bp 1 0.460697942262199 1 0.226381301879883 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QPCTL ENSG00000011478 CDS Human protein_coding chr19:46196120 chr19:46196137 nonsynonymous SNV 0.839 0 38 hm5C_associated_SNPs_45944 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:46196137-46196138
64251 chr5 43649326 43649326 1 + G A UCEC 43649344 + 43649324 43649364 41 TGGCTGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACC TGACTGGCATTGTGGGGTATCATACCGTCTGGGGAGTGACC < 41bp 1 0.0839637324601637 1 0.0337048470973969 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control NNT ENSG00000112992 CDS Human protein_coding chr5:43649344 chr5:43649326 nonsynonymous SNV 0.996 3 3 hm5C_associated_SNPs_45945 0 0 1 DDX24 POSTAR2 ENCODE chr5:43649308-43649391
64251 chr12 56504368 56504368 1 + C T UCEC 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGAGAACCATTATTTACAAACGAGACCCCTCTAAACA < 41bp 1 0.309586910758293 1 0.447910130023956 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504368 nonsynonymous SNV 0.999 4 14 hm5C_associated_SNPs_45947 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr1 171763645 171763645 1 + T C UCEC 171763629 + 171763609 171763649 41 CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTTAAAA CCCAGCATTTGTGGAGCAATCTTTTCTACAGAAGGTCAAAA < 41bp 1 0.176102036334831 1 0.0640592277050018 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763629 chr1:171763645 synonymous SNV . 0 37 hm5C_associated_SNPs_45948 0 0 1 PRPF8 POSTAR2 ENCODE chr1:171763642-171763704
64251 chr1 203787702 203787702 1 + A G UCEC 203787706 + 203787686 203787726 41 ATTTGTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGA ATTTGTTTACAGGGTGGCAGCTGCCCATTCCGTCACTGTGA < 41bp 1 0.383872488909564 1 0.116609692573547 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787706 chr1:203787702 nonsynonymous SNV 0.999 4 17 hm5C_associated_SNPs_45953 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787702 203787702 1 + A G UCEC 203787710 + 203787690 203787730 41 GTTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCT GTTTACAGGGTGGCAGCTGCCCATTCCGTCACTGTGAAGCT < 41bp 1 0.107476918896952 1 0.099665105342865 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787710 chr1:203787702 nonsynonymous SNV 0.999 4 13 hm5C_associated_SNPs_45954 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr1 203787702 203787702 1 + A G UCEC 203787711 + 203787691 203787731 41 TTTACAGGGTGACAGCTGCCCATTCCGTCACTGTGAAGCTG TTTACAGGGTGGCAGCTGCCCATTCCGTCACTGTGAAGCTG < 41bp 1 0.0699243705724445 1 0.0820406377315521 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ZC3H11A ENSG00000058673 CDS Human protein_coding chr1:203787711 chr1:203787702 nonsynonymous SNV 0.999 4 12 hm5C_associated_SNPs_45955 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:203787700-203787720
64251 chr15 29346706 29346706 1 + G A UCEC 29346699 + 29346679 29346719 41 CCCGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCG CCCGAGGAGGCCAACGGGAACACCGGCACCTCCCCCTACCG < 41bp 1 0.732880114956892 1 0.336941629648209 experiment 0.534239770086217 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346699 chr15:29346706 nonsynonymous SNV 0.269 0 28 hm5C_associated_SNPs_45956 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr7 77539623 77539623 1 + G T UCEC 77539642 + 77539622 77539662 41 AGATAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA ATATAACACACAAGAGGGAGCAGTTCAGAACCACGGTACAA < 41bp 1 0.240472960156849 1 0.228506565093994 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77539642 chr7:77539623 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_45957 0 0 2 BUD13 POSTAR2 ENCODE chr7:77539538-77539662
64251 chr22 24459459 24459459 1 + C T UCEC 24459479 + 24459459 24459499 41 CAGATTTGGACCTGACTTCCCAGGGACCCACTGCCTGGGTG TAGATTTGGACCTGACTTCCCAGGGACCCACTGCCTGGGTG < 41bp 1 0.720205822773188 1 0.882633864879608 experiment 0.559588354453623 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control CABIN1 ENSG00000099991 CDS Human protein_coding chr22:24459479 chr22:24459459 synonymous SNV . 0 1 hm5C_associated_SNPs_45958 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:24459446-24459462
64251 chr3 62229564 62229564 1 + C A UCEC 62229569 + 62229549 62229589 41 GTATCCCTATTATTCCTATTCCGGGTAAGTAAGACACTGCT GTATCCCTATTATTCATATTCCGGGTAAGTAAGACACTGCT < 41bp 1 0.228017504417369 1 0.874078333377838 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PTPRG ENSG00000144724 CDS Human protein_coding chr3:62229569 chr3:62229564 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_45959 0 0 1 PRPF8 POSTAR2 ENCODE chr3:62229562-62229607
64251 chr1 230384969 230384969 1 + C T UCEC 230384971 + 230384951 230384991 41 TCAAGTGGGATTACATGACGCCTGAGCAGAGAAGGTCCCGG TCAAGTGGGATTACATGATGCCTGAGCAGAGAAGGTCCCGG < 41bp 1 0.274878662647843 1 0.0750665366649628 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230384971 chr1:230384969 nonsynonymous SNV 0.990 3 19 hm5C_associated_SNPs_45960 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230384940-230384980
64251 chr4 88967974 88967974 1 + A G UCEC 88967960 + 88967940 88967980 41 TGGAAGAGATATTGGAAATTCGCATTCACAAACTACACTAT TGGAAGAGATATTGGAAATTCGCATTCACAAACTGCACTAT < 41bp 1 0.353477375546737 1 0.499312996864319 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PKD2 ENSG00000118762 CDS Human protein_coding chr4:88967960 chr4:88967974 synonymous SNV . 0 35 hm5C_associated_SNPs_45961 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr4:88967961-88967984
64251 chr1 145440779 145440779 1 + A G UCEC 145440782 + 145440762 145440802 41 ATCTGAACATCCCTGATACCCCAGAAGGTGAGCCAGACCTA ATCTGAACATCCCTGATGCCCCAGAAGGTGAGCCAGACCTA < 41bp 1 0.252815201493506 1 0.28320649266243 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXNIP ENSG00000117289 CDS Human other chr1:145440782 chr1:145440779 nonsynonymous SNV . 0 18 hm5C_associated_SNPs_45963 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:145440762-145440786
64251 chr1 145440779 145440779 1 + A G UCEC 145440783 + 145440763 145440803 41 TCTGAACATCCCTGATACCCCAGAAGGTGAGCCAGACCTAA TCTGAACATCCCTGATGCCCCAGAAGGTGAGCCAGACCTAA < 41bp 1 0.325967426316003 1 0.487674474716187 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TXNIP ENSG00000117289 CDS Human other chr1:145440783 chr1:145440779 nonsynonymous SNV . 0 17 hm5C_associated_SNPs_45964 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:145440762-145440786
64251 chr16 22328487 22328487 1 + G A UCEC 22328499 + 22328479 22328519 41 CTGCGCACGCTGCCCCTGGCCGATCAGATCAAGATCCTGAT CTGCGCACACTGCCCCTGGCCGATCAGATCAAGATCCTGAT < 41bp 1 0.143816299634723 1 0.0499754846096039 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22328499 chr16:22328487 synonymous SNV . 0 9 hm5C_associated_SNPs_45965 0 0 5 BUD13 POSTAR2 ENCODE chr16:22328410-22328512
64251 chr3 52245362 52245362 1 + G A UCEC 52245356 + 52245336 52245376 41 CACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTG CACGAGTTCTCTGATTGACACCGTACAGTCCTATGCTGCTG < 41bp 1 0.404875563181378 1 0.270872950553894 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245356 chr3:52245362 nonsynonymous SNV 0.024 5 27 hm5C_associated_SNPs_45966 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:52245359-52245376
64251 chr3 52245362 52245362 1 + G A UCEC 52245357 + 52245337 52245377 41 ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGG ACGAGTTCTCTGATTGACACCGTACAGTCCTATGCTGCTGG < 41bp 1 0.119278945110914 1 0.252921044826508 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245357 chr3:52245362 nonsynonymous SNV 0.024 5 26 hm5C_associated_SNPs_45967 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:52245359-52245376
64251 chr3 52245362 52245362 1 + G A UCEC 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTGATTGACACCGTACAGTCCTATGCTGCTGGCTTC < 41bp 1 0.267676289389027 1 0.203156560659409 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245362 nonsynonymous SNV 0.024 5 22 hm5C_associated_SNPs_45968 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr3:52245359-52245376
64251 chr22 41923391 41923391 1 + G A UCEC 41923388 + 41923368 41923408 41 AGCCTCGCCACCTTGGGGGCCGGGCCATCATCACCAAGAGC AGCCTCGCCACCTTGGGGGCCGGACCATCATCACCAAGAGC < 41bp 1 0.110519523054057 1 0.298592925071716 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923388 chr22:41923391 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_45970 0 0 1 RPS3 POSTAR2 ENCODE chr22:41923359-41923403
64251 chr2 138762729 138762729 1 + G T UCEC 138762727 + 138762707 138762747 41 GTATTATGTAAAAGACATCCCAGCTACCCTGAAATTCTTCC GTATTATGTAAAAGACATCCCATCTACCCTGAAATTCTTCC < 41bp 1 0.0881755536447166 1 0.137805610895157 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HNMT ENSG00000150540 CDS Human protein_coding chr2:138762727 chr2:138762729 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_45971 0 0 3 SF3A3 POSTAR2 ENCODE chr2:138762642-138762764
64251 chrX 73043713 73043713 1 - A G UCEC 73043732 - 73043712 73043752 41 GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGTT GGGGCTCGGAACTACATGCCCTAGGATATAAAAATGATGCT < 41bp 1 0.327958789056756 1 0.458993315696716 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73043732 chrX:73043713 . . 0 40 hm5C_associated_SNPs_45972 0 0 56 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:73041889-73043809
64251 chr7 6634149 6634149 1 + G A UCEC 6634139 + 6634119 6634159 41 CTGCTGTTTGGTGCCGGGATCCATTCAGACGCTGAAGCAGA CTGCTGTTTGGTGCCGGGATCCATTCAGACACTGAAGCAGA < 41bp 1 0.0479007506088255 1 0.406984120607376 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634139 chr7:6634149 synonymous SNV . 0 31 hm5C_associated_SNPs_45973 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:6634107-6634153
64251 chr1 182848501 182848501 1 + C T UCEC 182848482 + 182848462 182848502 41 TAGGAGGAATTGGCCAATTTCTGGCCAAAGCAATTGAACCT TAGGAGGAATTGGCCAATTTCTGGCCAAAGCAATTGAACTT < 41bp 1 0.747090939489002 1 0.775747537612915 experiment 0.505818121021996 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DHX9 ENSG00000135829 CDS Human protein_coding chr1:182848482 chr1:182848501 nonsynonymous SNV 0.999 4 40 hm5C_associated_SNPs_45974 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:182848497-182848518
64251 chr16 72134478 72134478 1 + C T UCEC 72134463 + 72134443 72134483 41 GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGCATTGT GTGCACAATCTGGTGCCTCCCTTTCTGGATGGGCGTATTGT < 41bp 1 0.0694530980275506 1 0.0340635776519775 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134463 chr16:72134478 synonymous SNV . 0 36 hm5C_associated_SNPs_45975 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:72134440-72134478
64251 chr7 141341096 141341096 1 + G T UCEC 141341103 + 141341083 141341123 41 CACGGGACCTACAGAGAGACCTCCCAATGAACCAGAGGAGA CACGGGACCTACATAGAGACCTCCCAATGAACCAGAGGAGA < 41bp 1 0.273693577765836 1 0.0585985779762268 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control AGK ENSG00000006530 CDS Human protein_coding chr7:141341103 chr7:141341096 stopgain 1.000 1 14 hm5C_associated_SNPs_45977 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141341069-141341096
64251 chr6 130381237 130381237 1 + C T UCEC 130381222 + 130381202 130381242 41 AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGCGTGGA AAAAATGGATTCAAAGTTGGCATGAAATTAGAAGGTGTGGA < 41bp 1 0.434071503716678 1 0.273564338684082 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381222 chr6:130381237 synonymous SNV . 0 36 hm5C_associated_SNPs_45980 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr1 166818962 166818962 1 + C T UCEC 166818969 + 166818949 166818989 41 TTGATAACCAGGGCGAAAAGCCTGTCTTGGTCAAGACACCA TTGATAACCAGGGTGAAAAGCCTGTCTTGGTCAAGACACCA < 41bp 1 0.0799329566781392 1 0.0435179173946381 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POGK ENSG00000143157 CDS Human protein_coding chr1:166818969 chr1:166818962 synonymous SNV . 0 14 hm5C_associated_SNPs_45982 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:166818920-166818980
64251 chr19 10897280 10897280 1 + G A UCEC 10897279 + 10897259 10897299 41 GGGAGTCGCTGCCGGCCCTACGTAGCAAACTACAGAGCCAG GGGAGTCGCTGCCGGCCCTACATAGCAAACTACAGAGCCAG < 41bp 1 0.165719331063334 1 0.121634185314178 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNM2 ENSG00000079805 CDS Human protein_coding chr19:10897279 chr19:10897280 nonsynonymous SNV 0.556 4 22 hm5C_associated_SNPs_45986 2 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10897245-10897280
64251 chr11 4142935 4142935 1 + A G UCEC 4142924 + 4142904 4142944 41 AGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTC AGAACACAGGAAAGGAAGAGCAGCGTGCCAGGGATCTTTTC < 41bp 1 0.615572258756493 1 0.718154668807983 experiment 0.768855482487013 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142924 chr11:4142935 synonymous SNV . 0 32 hm5C_associated_SNPs_45987 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:4142923-4142948
64251 chr8 110569182 110569182 1 + G T UCEC 110569185 + 110569165 110569205 41 TTGTTATTAAGAAGAGAGAACCATTGAATTTTGGCATCCCA TTGTTATTAAGAAGAGATAACCATTGAATTTTGGCATCCCA < 41bp 1 0.0520228718304331 1 0.119010508060455 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110569185 chr8:110569182 stopgain 1.000 1 18 hm5C_associated_SNPs_45988 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:110569167-110569190
64251 chr1 46070645 46070645 1 + G A UCEC 46070650 + 46070630 46070670 41 GCTAATGAGTGTGGAGAAGCCTTCTTTTTCTATGGGAAATC GCTAATGAGTGTGGAAAAGCCTTCTTTTTCTATGGGAAATC < 41bp 1 0.255824422289339 1 0.0554491579532623 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NASP ENSG00000132780 CDS Human protein_coding chr1:46070650 chr1:46070645 nonsynonymous SNV 1.000 5 16 hm5C_associated_SNPs_45989 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46070601-46070650
64251 chr2 182786925 182786925 1 + C A UCEC 182786940 + 182786920 182786960 41 GGTGGCTCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG GGTGGATCTAACGCCAACAGCTCCTTCTAGAACAGGCTCTG < 41bp 1 0.536340616281472 1 0.180770635604858 experiment 0.927318767437055 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786940 chr2:182786925 nonsynonymous SNV 0.624 3 6 hm5C_associated_SNPs_45991 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:182786896-182786937
64251 chr2 177015077 177015077 1 + G A UCEC 177015059 + 177015039 177015079 41 TGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTG TGTAACGTTGTCTATATATACCCTGTAGAACCGAATTTATG < 41bp 1 0.285420030757393 1 0.0261346101760864 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015059 chr2:177015077 . . 0 39 hm5C_associated_SNPs_45992 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015077 177015077 1 + G A UCEC 177015060 + 177015040 177015080 41 GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTGTGT GTAACGTTGTCTATATATACCCTGTAGAACCGAATTTATGT < 41bp 1 0.143192722719245 1 0.0399515330791473 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015060 chr2:177015077 . . 0 38 hm5C_associated_SNPs_45993 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015077 177015077 1 + G A UCEC 177015069 + 177015049 177015089 41 TCTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGT TCTATATATACCCTGTAGAACCGAATTTATGTGGTATCCGT < 41bp 1 0.615525983814997 1 0.062897652387619 experiment 0.768948032370005 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015069 chr2:177015077 . . 0 29 hm5C_associated_SNPs_45994 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr2 177015077 177015077 1 + G A UCEC 177015070 + 177015050 177015090 41 CTATATATACCCTGTAGAACCGAATTTGTGTGGTATCCGTA CTATATATACCCTGTAGAACCGAATTTATGTGGTATCCGTA < 41bp 1 0.399184549789918 1 0.150236964225769 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout MIR10B ENSG00000207744 ncRNA_exonic Human miRNA chr2:177015070 chr2:177015077 . . 0 28 hm5C_associated_SNPs_45995 0 0 58 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:177015056-177015079
64251 chr6 52943654 52943654 1 + C A UCEC 52943668 + 52943648 52943688 41 AGATTACTTATACCCGGTCTCCAGATGGTGATGGCGTTGGA AGATTAATTATACCCGGTCTCCAGATGGTGATGGCGTTGGA < 41bp 1 0.664918417081145 1 0.736110687255859 experiment 0.67016316583771 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52943668 chr6:52943654 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_45997 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:52943602-52943690
64251 chr2 46609713 46609713 1 + C A UCEC 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACCAGGACTACAGCATGTCGTCAGCCCACAA < 41bp 1 0.776521956334661 1 0.265635430812836 experiment 0.446956087330677 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609713 nonsynonymous SNV 0.257 0 25 hm5C_associated_SNPs_45998 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831629 chr2:46609700-46609720
64251 chr2 216977763 216977763 1 + G A UCEC 216977783 + 216977763 216977803 41 GTGGGCTTTACCATGAGTAACTCCATTCCTGGTATAGAATC ATGGGCTTTACCATGAGTAACTCCATTCCTGGTATAGAATC < 41bp 1 0.70650023965812 1 0.80434238910675 experiment 0.586999520683761 Functional Loss 31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control XRCC5 ENSG00000079246 CDS Human protein_coding chr2:216977783 chr2:216977763 nonsynonymous SNV 0.998 4 1 hm5C_associated_SNPs_45999 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:216977736-216977766
64251 chr14 37754606 37754606 1 + G T UCEC 37754619 + 37754599 37754639 41 GGAGAGAGATGAAGCAATTGCACGAGCCAAGCATATGGAAA GGAGAGATATGAAGCAATTGCACGAGCCAAGCATATGGAAA < 41bp 1 0.490059943714095 1 0.54093474149704 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MIPOL1 ENSG00000151338 CDS Human protein_coding chr14:37754619 chr14:37754606 nonsynonymous SNV 0.997 4 8 hm5C_associated_SNPs_46000 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:37754558-37754613
64251 chr11 63719959 63719959 1 + C T UCEC 63719969 + 63719949 63719989 41 TACCTCATCGCGTGGGAAAACAGCTCCGTCCCTGTTGCCTT TACCTCATCGTGTGGGAAAACAGCTCCGTCCCTGTTGCCTT < 41bp 1 0.655708487885928 1 0.609795808792114 experiment 0.688583024228143 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719969 chr11:63719959 nonsynonymous SNV 0.978 3 11 hm5C_associated_SNPs_46001 0 0 3 GRWD1 POSTAR2 ENCODE chr11:63719953-63720040
64251 chr16 5127933 5127933 1 + G A UCEC 5127916 + 5127896 5127936 41 ATTTCATTGCAGGGCTGTGACCGTCTACGACAAGCCCGCAT ATTTCATTGCAGGGCTGTGACCGTCTACGACAAGCCCACAT < 41bp 1 0.165848258435223 1 0.20905864238739 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127916 chr16:5127933 nonsynonymous SNV 0.662 2 38 hm5C_associated_SNPs_46002 0 0 2 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr20 57484814 57484814 1 + G A UCEC 57484828 + 57484808 57484848 41 CCAACCGCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC CCAACCACCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATC < 41bp 1 0.398310773992574 1 0.155091255903244 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient GNAS ENSG00000087460 CDS Human protein_coding chr20:57484828 chr20:57484814 nonsynonymous SNV 1.000 5 7 hm5C_associated_SNPs_46006 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:57484779-57484852
64251 chr17 4859438 4859438 1 + C T UCEC 4859423 + 4859403 4859443 41 CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAG CAACCAGATCGGCTCGGTGACCGAATCGATCCAGGTGTGAG < 41bp 1 0.473279365277952 1 0.13961735367775 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859423 chr17:4859438 nonsynonymous SNV 0.999 3 36 hm5C_associated_SNPs_46008 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859438 4859438 1 + C T UCEC 4859424 + 4859404 4859444 41 AACCAGATCGGCTCGGTGACCGAATCGATCCAGGCGTGAGT AACCAGATCGGCTCGGTGACCGAATCGATCCAGGTGTGAGT < 41bp 1 0.374634489993058 1 0.475293844938278 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859424 chr17:4859438 nonsynonymous SNV 0.999 3 35 hm5C_associated_SNPs_46009 0 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr19 39948351 39948351 1 + A G UCEC 39948343 + 39948323 39948363 41 GATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGA GATGAGTATGAGGACGAGGACCAGTGGGGGGATGGAGCAGA < 41bp 1 0.295151420310367 1 0.153096437454224 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948343 chr19:39948351 nonsynonymous SNV 0.997 2 29 hm5C_associated_SNPs_46011 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948351 39948351 1 + A G UCEC 39948344 + 39948324 39948364 41 ATGAGTATGAGGACGAGGACCAGTGGGAGGATGGAGCAGAG ATGAGTATGAGGACGAGGACCAGTGGGGGGATGGAGCAGAG < 41bp 1 0.549384221602726 1 0.219991713762283 experiment 0.901231556794547 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948344 chr19:39948351 nonsynonymous SNV 0.997 2 28 hm5C_associated_SNPs_46012 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948351 39948351 1 + A G UCEC 39948360 + 39948340 39948380 41 GGACCAGTGGGAGGATGGAGCAGAGGACATTCTAGAGAAAG GGACCAGTGGGGGGATGGAGCAGAGGACATTCTAGAGAAAG < 41bp 1 0.649545530591356 1 0.844734191894531 experiment 0.700908938817287 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948360 chr19:39948351 nonsynonymous SNV 0.997 2 12 hm5C_associated_SNPs_46013 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chr19 39948351 39948351 1 + A G UCEC 39948367 + 39948347 39948387 41 TGGGAGGATGGAGCAGAGGACATTCTAGAGAAAGGTGTGTG TGGGGGGATGGAGCAGAGGACATTCTAGAGAAAGGTGTGTG < 41bp 1 0.0535783829350573 1 0.0631246566772461 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39948367 chr19:39948351 nonsynonymous SNV 0.997 2 5 hm5C_associated_SNPs_46014 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:39948307-39948399
64251 chrX 70776892 70776892 1 + G A UCEC 70776893 + 70776873 70776913 41 GAGCCTTGCAGTGTTATACGCGTGCCATCCAAATTAATCCT GAGCCTTGCAGTGTTATACACGTGCCATCCAAATTAATCCT < 41bp 1 0.237602396912635 1 0.0417568385601044 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control OGT ENSG00000147162 CDS Human protein_coding chrX:70776893 chrX:70776892 synonymous SNV . 0 20 hm5C_associated_SNPs_46015 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:70776805-70776893
64251 chr7 139107034 139107034 1 + G A UCEC 139107016 + 139106996 139107036 41 TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA TCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGACA < 41bp 1 0.0797522189479944 1 0.085328221321106 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107016 chr7:139107034 nonsynonymous SNV 1.000 3 39 hm5C_associated_SNPs_46016 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107034 139107034 1 + G A UCEC 139107017 + 139106997 139107037 41 CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCAG CGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGACAG < 41bp 1 0.176993993630671 1 0.0683114528656006 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107017 chr7:139107034 nonsynonymous SNV 1.000 3 38 hm5C_associated_SNPs_46017 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107034 139107034 1 + G A UCEC 139107028 + 139107008 139107048 41 GAAGCGGTCCTATGAGAGTGCTAATGGCAGATCAGAAGACA GAAGCGGTCCTATGAGAGTGCTAATGACAGATCAGAAGACA < 41bp 1 0.321729576134599 1 0.125724822282791 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107028 chr7:139107034 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_46018 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr7 139107034 139107034 1 + G A UCEC 139107035 + 139107015 139107055 41 TCCTATGAGAGTGCTAATGGCAGATCAGAAGACAGGAGGAG TCCTATGAGAGTGCTAATGACAGATCAGAAGACAGGAGGAG < 41bp 1 0.570174784320111 1 0.408235043287277 experiment 0.859650431359778 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107035 chr7:139107034 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_46019 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr4 3101058 3101058 1 + C T UCEC 3101067 + 3101047 3101087 41 TTTCTGCTGTGCAGTGATGACGCAGAGTCAGATGTCAGGAT TTTCTGCTGTGTAGTGATGACGCAGAGTCAGATGTCAGGAT < 41bp 1 0.335603798395304 1 0.409471124410629 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HTT ENSG00000197386 CDS Human protein_coding chr4:3101067 chr4:3101058 synonymous SNV . 0 12 hm5C_associated_SNPs_46020 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:3101035-3101068
64251 chr11 45891359 45891359 1 + C T UCEC 45891339 + 45891319 45891359 41 GCTTCCTGACCCGCGGGGACCTCTGGGTCAGCTGGGAGAGC GCTTCCTGACCCGCGGGGACCTCTGGGTCAGCTGGGAGAGT < 41bp 1 0.509901769582751 1 0.236298650503159 experiment 0.980196460834499 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CRY2 ENSG00000121671 CDS Human protein_coding chr11:45891339 chr11:45891359 synonymous SNV . 0 41 hm5C_associated_SNPs_46021 0 0 1 PRPF8 POSTAR2 ENCODE chr11:45891344-45891398
64251 chr19 57795980 57795980 1 + A G UCEC 57795986 + 57795966 57796006 41 GTGGGGGCAGTTGGACGTGACCCAGAGGGCCTTGTACGTGG GTGGGGGCAGTTGGGCGTGACCCAGAGGGCCTTGTACGTGG < 41bp 1 0.694596978676346 1 0.158413887023926 experiment 0.610806042647308 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57795986 chr19:57795980 nonsynonymous SNV 0.934 1 15 hm5C_associated_SNPs_46023 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:57795916-57795988
64251 chr12 56504379 56504379 1 + C T UCEC 56504375 + 56504355 56504395 41 GGACAGAGAACCACTATTTACAAACGAGACCCCTCTAAACA GGACAGAGAACCACTATTTACAAATGAGACCCCTCTAAACA < 41bp 1 0.407348710856317 1 0.397525817155838 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PA2G4 ENSG00000170515 CDS Human protein_coding chr12:56504375 chr12:56504379 stopgain 1.000 1 25 hm5C_associated_SNPs_46024 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56504338-56504406
64251 chr5 169127070 169127070 1 + G T UCEC 169127059 + 169127039 169127079 41 TGCTGGTGGGTGACATCATTCAGATTCGCAAGGACTATCCA TGCTGGTGGGTGACATCATTCAGATTCGCAATGACTATCCA < 41bp 1 0.479551382625441 1 0.718341410160065 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127059 chr5:169127070 nonsynonymous SNV 1.000 4 32 hm5C_associated_SNPs_46025 0 0 4 DDX24 POSTAR2 ENCODE chr5:169127026-169127118
64251 chr2 54872430 54872430 1 + C T UCEC 54872413 + 54872393 54872433 41 AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCT AAGAAGGAGATCGAAGAGCTCCAAAGCCAAGCCCAGGTCCT < 41bp 1 0.268921151802453 1 0.120482206344604 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872413 chr2:54872430 nonsynonymous SNV 0.999 1 38 hm5C_associated_SNPs_46026 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr2 54872430 54872430 1 + C T UCEC 54872420 + 54872400 54872440 41 AGATCGAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAG AGATCGAAGAGCTCCAAAGCCAAGCCCAGGTCCTGAGTCAG < 41bp 1 0.260544678723597 1 0.512397289276123 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872420 chr2:54872430 nonsynonymous SNV 0.999 1 31 hm5C_associated_SNPs_46027 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr2 54872430 54872430 1 + C T UCEC 54872425 + 54872405 54872445 41 GAAGAGCTCCAAAGCCAAGCCCAGGCCCTGAGTCAGGAAGG GAAGAGCTCCAAAGCCAAGCCCAGGTCCTGAGTCAGGAAGG < 41bp 1 0.242717281827549 1 0.466951072216034 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54872425 chr2:54872430 nonsynonymous SNV 0.999 1 26 hm5C_associated_SNPs_46028 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:54872421-54872467
64251 chr12 22199361 22199361 1 + C T UCEC 22199363 + 22199343 22199383 41 GGCCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGCCCTAAT GGCCGAGGTGTGGAGAAGTCCCCGCACCTGGCAGCCCTAAT < 41bp 1 0.68977431936673 1 0.260803401470184 experiment 0.62045136126654 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22199363 chr12:22199361 nonsynonymous SNV 0.997 0 19 hm5C_associated_SNPs_46029 0 0 2 DDX3X POSTAR2 ENCODE chr12:22199340-22199407
64251 chr12 22199361 22199361 1 + C T UCEC 22199365 + 22199345 22199385 41 CCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGCCCTAATTC CCGAGGTGTGGAGAAGTCCCCGCACCTGGCAGCCCTAATTC < 41bp 1 0.789336191837127 1 0.344094842672348 experiment 0.421327616325745 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CMAS ENSG00000111726 CDS Human protein_coding chr12:22199365 chr12:22199361 nonsynonymous SNV 0.997 0 17 hm5C_associated_SNPs_46030 0 0 2 DDX3X POSTAR2 ENCODE chr12:22199340-22199407
64251 chr1 10195147 10195147 1 + G A UCEC 10195142 + 10195122 10195162 41 TCAAGTTAGAAACAGTTGATCCCACGTATATTTTTCACCCA TCAAGTTAGAAACAGTTGATCCCACATATATTTTTCACCCA < 41bp 1 0.0800880073827933 1 0.208191961050034 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBE4B ENSG00000130939 CDS Human protein_coding chr1:10195142 chr1:10195147 synonymous SNV . 0 26 hm5C_associated_SNPs_46031 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:10195142-10195184
64251 chr11 82921423 82921423 1 + C T UCEC 82921433 + 82921413 82921453 41 AACTCATGGACATTCTTTCACTTTACAAATAATGCTCCGAA AACTCATGGATATTCTTTCACTTTACAAATAATGCTCCGAA < 41bp 1 0.336478962281585 1 0.0493552684783936 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ANKRD42 ENSG00000137494 CDS Human protein_coding chr11:82921433 chr11:82921423 nonsynonymous SNV 1.000 4 11 hm5C_associated_SNPs_46032 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:82921417-82921438
64251 chr15 42052707 42052707 1 + A G UCEC 42052715 + 42052695 42052735 41 TCCAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT TCCAAGGTTTCCGAAAGTCTCATTCTTACTCGAGTAAGTGT < 41bp 1 0.0295282159809595 1 0.0652387142181396 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42052715 chr15:42052707 nonsynonymous SNV 1.000 5 13 hm5C_associated_SNPs_46036 0 0 2 PRPF8 POSTAR2 ENCODE chr15:42052697-42052819
64251 chr11 61404915 61404915 1 + C T UCEC 61404895 + 61404875 61404915 41 ATCGACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGAC ATCGACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGAT < 41bp 1 0.215417513059598 1 0.104501754045486 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPLP0P2 ENSG00000243742 ncRNA_exonic Human transcribed_processed_pseudogene chr11:61404895 chr11:61404915 . . 0 41 hm5C_associated_SNPs_46037 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:61404903-61404930
64251 chr11 47306108 47306108 1 + G A UCEC 47306101 + 47306081 47306121 41 AGCAGCCCCAGCACTGTCATCCACGGAGCCAACTCTGTAAG AGCAGCCCCAGCACTGTCATCCACGGAACCAACTCTGTAAG < 41bp 1 0.291530529415875 1 0.165913701057434 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47306101 chr11:47306108 nonsynonymous SNV 0.377 0 28 hm5C_associated_SNPs_46038 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:47306091-47306111
64251 chr17 49247315 49247315 1 + C T UCEC 49247300 + 49247280 49247320 41 CATTTTCACACTTTCGAGGTCTGGGAGGGGCTGAACGTGGT CATTTTCACACTTTCGAGGTCTGGGAGGGGCTGAATGTGGT < 41bp 1 0.541612029486789 1 0.377642869949341 experiment 0.916775941026421 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247300 chr17:49247315 synonymous SNV . 0 36 hm5C_associated_SNPs_46040 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr17 49247315 49247315 1 + C T UCEC 49247310 + 49247290 49247330 41 CTTTCGAGGTCTGGGAGGGGCTGAACGTGGTGAAGACAGGC CTTTCGAGGTCTGGGAGGGGCTGAATGTGGTGAAGACAGGC < 41bp 1 0.660197321014977 1 0.494282096624374 experiment 0.679605357970046 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NME1-NME2;NME2 ENSG00000011052;ENSG00000243678 CDS Human other chr17:49247310 chr17:49247315 synonymous SNV . 0 26 hm5C_associated_SNPs_46041 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:49247297-49247333
64251 chr12 57922970 57922970 1 + C T UCEC 57922978 + 57922958 57922998 41 CCTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAG CCTCCCCGGGCCTGCCCTGGCCGTCCTGCCAAAAACAAGAG < 41bp 1 0.0693537381840045 1 0.193139612674713 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922978 chr12:57922970 nonsynonymous SNV 1.000 4 13 hm5C_associated_SNPs_46042 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:57922946-57922980
64251 chr15 31221496 31221496 1 + G A UCEC 31221493 + 31221473 31221513 41 TGCAGCTGATTCATGATGCCCCCGAGGAGAGCCTGCGGGCC TGCAGCTGATTCATGATGCCCCCAAGGAGAGCCTGCGGGCC < 41bp 1 0.667264107984992 1 0.711269021034241 experiment 0.665471784030016 Functional Loss 31061524;GSE122268;BS-seq with improved protocol;Spleen;Control FAN1 ENSG00000198690 CDS Human protein_coding chr15:31221493 chr15:31221496 nonsynonymous SNV 0.005 1 24 hm5C_associated_SNPs_46043 0 0 3 GRWD1 POSTAR2 ENCODE chr15:31221419-31221508
64251 chr19 5041222 5041222 1 + C T UCEC 5041241 + 5041221 5041261 41 CCGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGA CTGATCTACGGGGCTGACATCAGCGGCTCTTTGTATGATGA < 41bp 1 0.44053600532731 1 0.809845328330994 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KDM4B ENSG00000127663 CDS Human protein_coding chr19:5041241 chr19:5041222 nonsynonymous SNV 0.859 4 2 hm5C_associated_SNPs_46044 0 0 4 BUD13 POSTAR2 ENCODE chr19:5041142-5041251
64251 chr2 102486175 102486175 1 + C T UCEC 102486184 + 102486164 102486204 41 CAGTGAGGAGTCGGGGACGACGGATGAGGAGGACGACGATG CAGTGAGGAGTTGGGGACGACGGATGAGGAGGACGACGATG < 41bp 1 0.686831786470311 1 0.599751234054565 experiment 0.626336427059378 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102486184 chr2:102486175 nonsynonymous SNV 0.992 3 12 hm5C_associated_SNPs_46045 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:102486174-102486175
64251 chr4 87683990 87683990 1 + C T UCEC 87684010 + 87683990 87684030 41 CGTGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCC TGTGGTACCCTGAGGCACATCTCGGAGAACTCCTTTGGGCC < 41bp 1 0.736295308898768 1 0.940333425998688 experiment 0.527409382202464 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PTPN13 ENSG00000163629 CDS Human protein_coding chr4:87684010 chr4:87683990 nonsynonymous SNV 0.926 2 1 hm5C_associated_SNPs_46046 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:87683971-87683997
64251 chr1 171544168 171544168 1 + A G UCEC 171544172 + 171544152 171544192 41 AACTGGAGTCAGCAGTAGTGCCAGTGGACCAAGCACTGCTA AACTGGAGTCAGCAGTGGTGCCAGTGGACCAAGCACTGCTA < 41bp 1 0.195387186053241 1 0.448800146579742 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171544172 chr1:171544168 nonsynonymous SNV 1.000 1 17 hm5C_associated_SNPs_46048 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:171544148-171544187
64251 chr19 39979217 39979217 1 + C T UCEC 39979223 + 39979203 39979243 41 ACGTGCGAACCGTGCTGGAGCACTATGCCCTGGAGGATGAC ACGTGCGAACCGTGTTGGAGCACTATGCCCTGGAGGATGAC < 41bp 1 0.45751994209663 1 0.0738299787044525 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TIMM50 ENSG00000105197 CDS Human protein_coding chr19:39979223 chr19:39979217 synonymous SNV . 0 15 hm5C_associated_SNPs_46049 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39979189-39979225
64251 chr14 39649925 39649925 1 + G C UCEC 39649941 + 39649921 39649961 41 GGAAGAGGAAAAGGAAATAGCGATTGTTCATAGTGATGCAG GGAACAGGAAAAGGAAATAGCGATTGTTCATAGTGATGCAG < 41bp 1 0.391139399686434 1 0.132819473743439 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PNN ENSG00000100941 CDS Human protein_coding chr14:39649941 chr14:39649925 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_46050 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39649751-39649939
64251 chr5 179143237 179143237 1 + G A UCEC 179143220 + 179143200 179143240 41 TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCGAGG TTCACGTGAAATTGAGGACCCAGAAGACCGGAAGCCCAAGG < 41bp 1 0.793759422343941 1 0.755387604236603 experiment 0.412481155312117 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CANX ENSG00000127022 CDS Human protein_coding chr5:179143220 chr5:179143237 nonsynonymous SNV 0.992 2 38 hm5C_associated_SNPs_46051 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179143107-179143246
64251 chr5 141353262 141353262 1 + A G UCEC 141353260 + 141353240 141353280 41 GTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGC GTCTGTCCAAGGTGGAGAAACCGGGATCTATTTGGATTTGC < 41bp 1 0.686349686013076 1 0.139412850141525 experiment 0.627300627973849 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RNF14 ENSG00000013561 CDS Human protein_coding chr5:141353260 chr5:141353262 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_46052 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:141353258-141353300
64251 chr14 72152256 72152256 1 + T C UCEC 72152244 + 72152224 72152264 41 CAGGTGCAGAGTCCCATGACCTCGCGGCTGAATGCTGGAAA CAGGTGCAGAGTCCCATGACCTCGCGGCTGAACGCTGGAAA < 41bp 1 0.473534948468281 1 0.393606126308441 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72152244 chr14:72152256 synonymous SNV . 0 33 hm5C_associated_SNPs_46053 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:72152240-72152260
64251 chrX 133511652 133511652 1 + C G UCEC 133511658 + 133511638 133511678 41 TTTAAAAATCATGTCAAGCTCAGTTGAACAGAAAAAAGGGC TTTAAAAATCATGTGAAGCTCAGTTGAACAGAAAAAAGGGC < 41bp 1 0.230945902682736 1 0.30511462688446 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133511658 chrX:133511652 stopgain 1.000 1 15 hm5C_associated_SNPs_46054 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:133511609-133511653
64251 chr20 31019209 31019209 1 + C T UCEC 31019221 + 31019201 31019241 41 GCCCTGATCAACTCTCGGACCTTCCATGCCTTACCATCACA GCCCTGATTAACTCTCGGACCTTCCATGCCTTACCATCACA < 41bp 1 0.0805353888682617 1 0.0821585059165955 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31019221 chr20:31019209 synonymous SNV . 0 9 hm5C_associated_SNPs_46055 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:31019178-31019214
64251 chr10 129141972 129141972 1 + G A UCEC 129141960 + 129141940 129141980 41 GCTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTC GCTTTCCTTACTCAAGAGTCCCTGCAACTGGAAAATTTTTC < 41bp 1 0.00974155226875579 1 0.0625201165676117 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141960 chr10:129141972 synonymous SNV . 0 33 hm5C_associated_SNPs_46056 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141961 + 129141941 129141981 41 CTTTCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCA CTTTCCTTACTCAAGAGTCCCTGCAACTGGAAAATTTTTCA < 41bp 1 0.222011308818899 1 0.295406699180603 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141961 chr10:129141972 synonymous SNV . 0 32 hm5C_associated_SNPs_46057 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141964 + 129141944 129141984 41 TCCTTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGT TCCTTACTCAAGAGTCCCTGCAACTGGAAAATTTTTCAAGT < 41bp 1 0.0910304432244267 1 0.19410029053688 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141964 chr10:129141972 synonymous SNV . 0 29 hm5C_associated_SNPs_46058 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141967 + 129141947 129141987 41 TTACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTGCC TTACTCAAGAGTCCCTGCAACTGGAAAATTTTTCAAGTGCC < 41bp 1 0.413478444391283 1 0.670081198215485 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141967 chr10:129141972 synonymous SNV . 0 26 hm5C_associated_SNPs_46059 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141980 + 129141960 129142000 41 CCTGCAACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAA CCTGCAACTGGAAAATTTTTCAAGTGCCAAGAGAGCCAAAA < 41bp 1 0.292125214836635 1 0.936692476272583 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141980 chr10:129141972 synonymous SNV . 0 13 hm5C_associated_SNPs_46060 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141986 + 129141966 129142006 41 ACTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTA ACTGGAAAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTA < 41bp 1 0.0467919042857434 1 0.201526492834091 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141986 chr10:129141972 synonymous SNV . 0 7 hm5C_associated_SNPs_46061 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr10 129141972 129141972 1 + G A UCEC 129141987 + 129141967 129142007 41 CTGGAGAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAA CTGGAAAATTTTTCAAGTGCCAAGAGAGCCAAAATCCTTAA < 41bp 1 0.46143027286047 1 0.609283745288849 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient DOCK1 ENSG00000150760 CDS Human protein_coding chr10:129141987 chr10:129141972 synonymous SNV . 0 6 hm5C_associated_SNPs_46062 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:129141972-129141985
64251 chr20 62521232 62521232 1 + C T UCEC 62521246 + 62521226 62521266 41 GAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG GAACGGTAGTGACAACCTCCCTTCCTCAGCGGGGAGTGGTG < 41bp 1 0.223954563461157 1 0.0559441447257996 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521246 chr20:62521232 synonymous SNV 0.971 0 7 hm5C_associated_SNPs_46063 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:62521200-62521238
64251 chr1 214794263 214794263 1 + T C UCEC 214794259 + 214794239 214794279 41 ACAATTCTAGCAGTCCTCATCTTTTGGATCAATTAAAAGCG ACAATTCTAGCAGTCCTCATCTTTCGGATCAATTAAAAGCG < 41bp 1 0.0291336624531981 1 0.173876911401749 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CENPF ENSG00000117724 CDS Human protein_coding chr1:214794259 chr1:214794263 nonsynonymous SNV 0.933 4 25 hm5C_associated_SNPs_46064 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214794135-214794272
64251 chr22 46733823 46733823 1 + A G UCEC 46733839 + 46733819 46733859 41 GAGTATTGGAATGATGTGTTCAGGTGAGTGCGGGTCACAGC GAGTGTTGGAATGATGTGTTCAGGTGAGTGCGGGTCACAGC < 41bp 1 0.756782796883605 1 0.707243740558624 experiment 0.48643440623279 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TRMU ENSG00000100416 CDS Human protein_coding chr22:46733839 chr22:46733823 nonsynonymous SNV 0.994 4 5 hm5C_associated_SNPs_46065 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:46733697-46733837
64251 chr10 114711283 114711283 1 + T C UCEC 114711291 + 114711271 114711311 41 AAGGGGCCACCGTATCCCGGCTACCCCTTCATCATGATCCC AAGGGGCCACCGCATCCCGGCTACCCCTTCATCATGATCCC < 41bp 1 0.397667686559005 1 0.0675317645072937 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114711291 chr10:114711283 nonsynonymous SNV 0.979 4 13 hm5C_associated_SNPs_46066 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:114711281-114711298
64251 chr1 223934711 223934711 1 + C T UCEC 223934719 + 223934699 223934739 41 GATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCA GATCAACGGATGTTATGAAGCGCTATCAGGGGGTGCCACCA < 41bp 1 0.75810137333668 1 0.71918785572052 experiment 0.48379725332664 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934719 chr1:223934711 synonymous SNV . 0 13 hm5C_associated_SNPs_46067 0 0 2 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 223934711 223934711 1 + C T UCEC 223934721 + 223934701 223934741 41 TCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACT TCAACGGATGTTATGAAGCGCTATCAGGGGGTGCCACCACT < 41bp 1 0.0669942885594445 1 0.0720525681972504 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223934721 chr1:223934711 synonymous SNV . 0 11 hm5C_associated_SNPs_46068 0 0 2 DDX24 POSTAR2 ENCODE chr1:223934697-223934732
64251 chr1 206902140 206902140 1 + A C UCEC 206902135 + 206902115 206902155 41 TGCCCGCACATCGTACGGATCGTGGATGTGTACGAGAATCT TGCCCGCACATCGTACGGATCGTGGCTGTGTACGAGAATCT < 41bp 1 0.470307063797062 1 0.119911551475525 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAPKAPK2 ENSG00000162889 CDS Human protein_coding chr1:206902135 chr1:206902140 nonsynonymous SNV 0.993 3 26 hm5C_associated_SNPs_46069 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:206902123-206902184
64251 chr6 88374525 88374525 1 + A G UCEC 88374522 + 88374502 88374542 41 CGCCCCAGACATCTGCATAGCATACAAACTGCACCTAGAGT CGCCCCAGACATCTGCATAGCATGCAAACTGCACCTAGAGT < 41bp 1 0.212508341952535 1 0.182071089744568 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ORC3 ENSG00000135336 CDS Human protein_coding chr6:88374522 chr6:88374525 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_46070 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:88374499-88374527
64251 chr7 127342515 127342515 1 + A G UCEC 127342535 + 127342515 127342555 41 AGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT GGTGTGGTCAGGGCCCTGCTCCTCCCAGATTACTACCTGGT < 41bp 1 0.0479086164408242 1 0.127466887235641 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SND1 ENSG00000197157 CDS Human protein_coding chr7:127342535 chr7:127342515 nonsynonymous SNV 1.000 2 1 hm5C_associated_SNPs_46072 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr7:127342500-127342525
64251 chr5 154330456 154330456 1 + T C UCEC 154330472 + 154330452 154330492 41 AAATTGTTTATCCTCCACAACTGCCTGGAGAACCTCGGAGA AAATCGTTTATCCTCCACAACTGCCTGGAGAACCTCGGAGA < 41bp 1 0.468547013014833 1 0.058233916759491 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330472 chr5:154330456 synonymous SNV . 0 5 hm5C_associated_SNPs_46073 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:154330431-154330469
64251 chrX 118602482 118602482 1 + A G UCEC 118602468 + 118602448 118602488 41 CGTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGACAGATG CGTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGGCAGATG < 41bp 1 0.406066047571353 1 0.0959844589233398 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118602468 chrX:118602482 nonsynonymous SNV 1.000 0 35 hm5C_associated_SNPs_46074 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:118602380-118602500
64251 chrX 118602482 118602482 1 + A G UCEC 118602469 + 118602449 118602489 41 GTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGACAGATGC GTCCTGCAGCAGTCTGCCTCCTCTTTCAACATGGCAGATGC < 41bp 1 0.547707042611889 1 0.539525508880615 experiment 0.904585914776222 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118602469 chrX:118602482 nonsynonymous SNV 1.000 0 34 hm5C_associated_SNPs_46075 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:118602380-118602500
64251 chr11 64085790 64085790 1 + G A UCEC 64085786 + 64085766 64085806 41 GCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTC GCAGCGGCAGCAAGACGGTACAGTAAAGGAGAGTGGGCGTC < 41bp 1 0.716557810147241 1 0.24184650182724 experiment 0.566884379705517 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085786 chr11:64085790 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_46076 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:64085780-64085800
64251 chr1 155033954 155033954 1 + A G UCEC 155033936 + 155033916 155033956 41 CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCAAG CCCCCCCTTCCAGGCCGCTGCCGCCTGACCCTGTGTCCGAG < 41bp 1 0.24362262778295 1 0.531488239765167 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient ADAM15 ENSG00000143537 CDS Human protein_coding chr1:155033936 chr1:155033954 nonsynonymous SNV 0.999 3 39 hm5C_associated_SNPs_46077 0 0 3 PRPF8 POSTAR2 ENCODE chr1:155033905-155034009
64251 chr5 37697793 37697793 1 + T C UCEC 37697804 + 37697784 37697824 41 GCTCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTTC GCTCATGACCCGGGCACAGACACTTCTTGCGTGACTTTTTC < 41bp 1 0.385093290878185 1 0.0567492544651031 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697804 chr5:37697793 nonsynonymous SNV 0.991 0 10 hm5C_associated_SNPs_46078 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:37697792-37697793
64251 chr5 37697793 37697793 1 + T C UCEC 37697806 + 37697786 37697826 41 TCATGACTCGGGCACAGACACTTCTTGCGTGACTTTTTCCT TCATGACCCGGGCACAGACACTTCTTGCGTGACTTTTTCCT < 41bp 1 0.236267017535377 1 0.0515223145484924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control WDR70 ENSG00000082068 CDS Human protein_coding chr5:37697806 chr5:37697793 nonsynonymous SNV 0.991 0 8 hm5C_associated_SNPs_46079 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:37697792-37697793
64251 chr15 91312387 91312387 1 + T C UCEC 91312388 + 91312368 91312408 41 TGCAAGTAACAGACTCATTTCTACTCTGGAGAATCTCTATG TGCAAGTAACAGACTCATTCCTACTCTGGAGAATCTCTATG < 41bp 1 0.29299470533206 1 0.027360588312149 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BLM ENSG00000197299 CDS Human protein_coding chr15:91312388 chr15:91312387 nonsynonymous SNV 0.964 2 20 hm5C_associated_SNPs_46081 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:91312338-91312425
64251 chr5 147819238 147819238 1 + T C UCEC 147819249 + 147819229 147819269 41 AGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGT AGCAGAAGCCATTTAGTGGTCCCTACCCCTATCACATCTGT < 41bp 1 0.231009593272157 1 0.0447927117347717 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819249 chr5:147819238 nonsynonymous SNV 0.955 3 10 hm5C_associated_SNPs_46083 0 0 1 UCHL5 POSTAR2 ENCODE chr5:147819209-147819325
64251 chr5 147819238 147819238 1 + T C UCEC 147819251 + 147819231 147819271 41 CAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTAT CAGAAGCCATTTAGTGGTCCCTACCCCTATCACATCTGTAT < 41bp 1 0.118417625383208 1 0.0238787531852722 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819251 chr5:147819238 nonsynonymous SNV 0.955 3 8 hm5C_associated_SNPs_46084 0 0 1 UCHL5 POSTAR2 ENCODE chr5:147819209-147819325
64251 chr5 147819238 147819238 1 + T C UCEC 147819256 + 147819236 147819276 41 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCC GCCATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCC < 41bp 1 0.0708595958904437 1 0.114633679389954 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819256 chr5:147819238 nonsynonymous SNV 0.955 3 3 hm5C_associated_SNPs_46085 0 0 1 UCHL5 POSTAR2 ENCODE chr5:147819209-147819325
64251 chr5 147819238 147819238 1 + T C UCEC 147819257 + 147819237 147819277 41 CTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCA CCATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCA < 41bp 1 0.0832390896697855 1 0.218760430812836 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147819257 chr5:147819238 nonsynonymous SNV 0.955 3 2 hm5C_associated_SNPs_46086 0 0 1 UCHL5 POSTAR2 ENCODE chr5:147819209-147819325
64251 chr16 15111278 15111278 1 + T C UCEC 15111272 + 15111252 15111292 41 ACTGTATAAACACGATGACCCTGCCTTGGTAAGTTTCCACT ACTGTATAAACACGATGACCCTGCCTCGGTAAGTTTCCACT < 41bp 1 0.320163356261867 1 0.0577011406421661 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15111272 chr16:15111278 nonsynonymous SNV 0.973 3 27 hm5C_associated_SNPs_46089 0 0 6 EFTUD2 POSTAR2 ENCODE chr16:15111264-15111316
64251 chr17 80529626 80529626 1 + C T UCEC 80529633 + 80529613 80529653 41 CGCCTTACTCCTACGCGCAGCTGATAGTTCAGGCGATTACG CGCCTTACTCCTATGCGCAGCTGATAGTTCAGGCGATTACG < 41bp 1 0.0833771866739308 1 0.0755923986434937 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80529633 chr17:80529626 synonymous SNV . 0 14 hm5C_associated_SNPs_46090 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:80529603-80529627
64251 chr4 148555321 148555321 1 + A G UCEC 148555322 + 148555302 148555342 41 GAAAACTTTATATTAAAGGACGGACAGTCAGGGGACATCCC GAAAACTTTATATTAAAGGGCGGACAGTCAGGGGACATCCC < 41bp 1 0.125550927644916 1 0.14733037352562 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555322 chr4:148555321 synonymous SNV . 0 20 hm5C_associated_SNPs_46091 0 0 1 BUD13 POSTAR2 ENCODE chr4:148555262-148555341
64251 chr6 151258049 151258049 1 + T G UCEC 151258052 + 151258032 151258072 41 CCTGCTTGAGGCAGCCTTCCCAAGGACCGACGTTTGGAGTG CCTGCTTGAGGCAGCCTGCCCAAGGACCGACGTTTGGAGTG < 41bp 1 0.701188547051899 1 0.9373379945755 experiment 0.597622905896202 Functional Loss 31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MTHFD1L ENSG00000120254 CDS Human protein_coding chr6:151258052 chr6:151258049 nonsynonymous SNV 0.994 4 18 hm5C_associated_SNPs_46092 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:151258048-151258075
64251 chr17 30325897 30325897 1 + G A UCEC 30325888 + 30325868 30325908 41 AAAAGGGGGAATCTGCTTCCCCTGCAAACGAAGAAATAACT AAAAGGGGGAATCTGCTTCCCCTGCAAACAAAGAAATAACT < 41bp 1 0.0663678158574032 1 0.457463562488556 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30325888 chr17:30325897 nonsynonymous SNV 1.000 1 30 hm5C_associated_SNPs_46093 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:30325875-30325934
64251 chr9 32440573 32440573 1 + C T UCEC 32440574 + 32440554 32440594 41 GAGACTGGGCAGCTAAGGGCCCTTTCCTGCTGGTGAGTATG GAGACTGGGCAGCTAAGGGTCCTTTCCTGCTGGTGAGTATG < 41bp 1 0.0201118943896876 1 0.0338228046894073 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACO1 ENSG00000122729 CDS Human protein_coding chr9:32440574 chr9:32440573 synonymous SNV . 0 20 hm5C_associated_SNPs_46094 0 0 1 PRPF8 POSTAR2 ENCODE chr9:32440566-32440640
64251 chr3 97661184 97661184 1 + A G UCEC 97661188 + 97661168 97661208 41 CACCTGGAGCTAAAGTAGCTCTATGGACTGAACATGGGCAA CACCTGGAGCTAAAGTGGCTCTATGGACTGAACATGGGCAA < 41bp 1 0.180969218107631 1 0.126392632722855 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CRYBG3 ENSG00000080200 CDS Human protein_coding chr3:97661188 chr3:97661184 synonymous SNV . 0 17 hm5C_associated_SNPs_46095 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:97661180-97661200
64251 chr1 6681504 6681504 1 + G A UCEC 6681488 + 6681468 6681508 41 CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTGCATG CAGATGACGATTCCTGGGACCTCGTGACCTGCTTCTACATG < 41bp 1 0.383819843316605 1 0.0184022784233093 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681488 chr1:6681504 nonsynonymous SNV 1.000 5 37 hm5C_associated_SNPs_46096 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6681476-6681504
64251 chr12 6941055 6941055 1 + C A UCEC 6941063 + 6941043 6941083 41 GCCATGGAGCACCTGGGGACCAGCTTCAAGGATCCTGTGAG GCCATGGAGCACATGGGGACCAGCTTCAAGGATCCTGTGAG < 41bp 1 0.367920176856968 1 0.295584917068481 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control P3H3 ENSG00000110811 CDS Human protein_coding chr12:6941063 chr12:6941055 nonsynonymous SNV 0.991 3 13 hm5C_associated_SNPs_46097 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:6941046-6941069
64251 chr17 42636746 42636746 1 + A G UCEC 42636759 + 42636739 42636779 41 TGAGACCACCGTGTGAGGGACGCCCCCAGGCCGGAACCGCG TGAGACCGCCGTGTGAGGGACGCCCCCAGGCCGGAACCGCG < 41bp 1 0.383154575455747 1 0.467890977859497 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636759 chr17:42636746 nonsynonymous SNV 0.979 0 8 hm5C_associated_SNPs_46098 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:42636746-42636747
64251 chr19 42398363 42398363 1 + A G UCEC 42398364 + 42398344 42398384 41 GACAAGAAGTCGGGGAGGAACTTCTTCCGGAAAAAGGTGCT GACAAGAAGTCGGGGAGGAGCTTCTTCCGGAAAAAGGTGCT < 41bp 1 0.123581805254972 1 0.367242693901062 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42398364 chr19:42398363 nonsynonymous SNV 0.993 0 20 hm5C_associated_SNPs_46099 0 0 1 DDX24 POSTAR2 ENCODE chr19:42398332-42398365
64251 chr11 62655902 62655902 1 + T C UCEC 62655920 + 62655900 62655940 41 CGTTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC CGCTCTCCGCTGGGCCTGGACTCTTCTCCTATATCCGCCAC < 41bp 1 0.389279320487 1 0.160574346780777 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC3A2 ENSG00000168003 CDS Human protein_coding chr11:62655920 chr11:62655902 nonsynonymous SNV 0.001 1 3 hm5C_associated_SNPs_46100 0 0 59 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:62655841-62655923
64251 chr1 16056355 16056355 1 + C T UCEC 16056369 + 16056349 16056389 41 CCCCAGCATCCTGACGGATGCCACCATGGAGAAGCTGGCAC CCCCAGTATCCTGACGGATGCCACCATGGAGAAGCTGGCAC < 41bp 1 0.0657518513542815 1 0.0742992162704468 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056369 chr1:16056355 synonymous SNV . 0 7 hm5C_associated_SNPs_46101 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:16056327-16056362
64251 chr1 16056355 16056355 1 + C T UCEC 16056373 + 16056353 16056393 41 AGCATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGC AGTATCCTGACGGATGCCACCATGGAGAAGCTGGCACTGGC < 41bp 1 0.468183250057489 1 0.405333489179611 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PLEKHM2 ENSG00000116786 CDS Human protein_coding chr1:16056373 chr1:16056355 synonymous SNV . 0 3 hm5C_associated_SNPs_46102 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:16056327-16056362
64251 chr1 92769569 92769569 1 + C T UCEC 92769553 + 92769533 92769573 41 GGGGAGGTTCATTACACCTGCTCACTACAGTGATGTCGTGG GGGGAGGTTCATTACACCTGCTCACTACAGTGATGTTGTGG < 41bp 1 0.165011525533711 1 0.07647705078125 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92769553 chr1:92769569 synonymous SNV . 0 37 hm5C_associated_SNPs_46103 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:92769539-92769572
64251 chr3 50311228 50311228 1 + C T UCEC 50311248 + 50311228 50311268 41 CCGCTGCTCTATGCCGTCTTCTCCACGTCCAGGTGAGGGGC TCGCTGCTCTATGCCGTCTTCTCCACGTCCAGGTGAGGGGC < 41bp 1 0.723242190624467 1 0.977631628513336 experiment 0.553515618751065 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control SEMA3B ENSG00000012171 ncRNA_exonic Human protein_coding chr3:50311248 chr3:50311228 . 0.003 3 1 hm5C_associated_SNPs_46105 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr3:50311208-50311229
64251 chr16 12450123 12450123 1 + A T UCEC 12450135 + 12450115 12450155 41 GCTCATCGATCTCCGGGGACCGGTGAGTGTTTCCCCAACCC GCTCATCGTTCTCCGGGGACCGGTGAGTGTTTCCCCAACCC < 41bp 1 0.399548645372778 1 0.508951961994171 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX29 ENSG00000048471 CDS Human protein_coding chr16:12450135 chr16:12450123 nonsynonymous SNV 0.873 2 9 hm5C_associated_SNPs_46106 0 0 2 PPIG POSTAR2 ENCODE chr16:12450019-12450128
64251 chr19 14561806 14561806 1 + G A UCEC 14561797 + 14561777 14561817 41 GGGGAGCTGCCCGCCGACCACCCCAAGGGGCGGCTGCTGCG GGGGAGCTGCCCGCCGACCACCCCAAGGGACGGCTGCTGCG < 41bp 1 0.6558514026392 1 0.761036038398743 experiment 0.688297194721599 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561797 chr19:14561806 synonymous SNV . 0 30 hm5C_associated_SNPs_46107 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14561792-14561822
64251 chr17 8192656 8192656 1 + A G UCEC 8192673 + 8192653 8192693 41 AGAACCTGGCCCTGAGGGGCCGCTGTCAAGAAGCCTGGGTC AGAGCCTGGCCCTGAGGGGCCGCTGTCAAGAAGCCTGGGTC < 41bp 1 0.480380758340732 1 0.352684706449509 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RANGRF ENSG00000108961 CDS Human protein_coding chr17:8192673 chr17:8192656 nonsynonymous SNV 0.791 0 4 hm5C_associated_SNPs_46108 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:8192634-8192677
64251 chr7 150761787 150761787 1 + C T UCEC 150761806 + 150761786 150761826 41 GCCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC GTCAGCGAGGCTGAGGGGGCCCGGGCTCTCACTCAGCCGTC < 41bp 1 0.566024325606831 1 0.439417093992233 experiment 0.867951348786339 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761806 chr7:150761787 nonsynonymous SNV 0.154 0 2 hm5C_associated_SNPs_46109 0 0 4 DDX24 POSTAR2 ENCODE chr7:150761764-150761844
64251 chr9 139733447 139733447 1 + C T UCEC 139733467 + 139733447 139733487 41 CGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATCACTCTT TGCTGCCTGCAGGCCCCGTCCCCAGTCAAGACATCACTCTT < 41bp 1 0.188669427354359 1 0.303894519805908 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139733467 chr9:139733447 nonsynonymous SNV 0.002 0 1 hm5C_associated_SNPs_46110 0 0 9 EIF3H POSTAR2 ENCODE chr9:139733400-139733464
64251 chr3 142756136 142756136 1 + T C UCEC 142756138 + 142756118 142756158 41 TCGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGAT TCGATGATCTTGATGGAGCCCCTATAAAAAGTCTTGATGAT < 41bp 1 0.0495306097309445 1 0.0622395575046539 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142756138 chr3:142756136 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_46111 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:142756117-142756176
64251 chr3 142756136 142756136 1 + T C UCEC 142756139 + 142756119 142756159 41 CGATGATCTTGATGGAGTCCCTATAAAAAGTCTTGATGATG CGATGATCTTGATGGAGCCCCTATAAAAAGTCTTGATGATG < 41bp 1 0.239219723408455 1 0.251822710037231 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control U2SURP ENSG00000163714 CDS Human protein_coding chr3:142756139 chr3:142756136 nonsynonymous SNV 1.000 3 18 hm5C_associated_SNPs_46112 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:142756117-142756176
64251 chr16 72141609 72141609 1 + C T UCEC 72141626 + 72141606 72141646 41 ATGCTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT ATGTTCATCGTGTCCTGTGACATGGGCTGCAGCTCCGAGAT < 41bp 1 0.699526025786557 1 0.269682705402374 experiment 0.600947948426885 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141626 chr16:72141609 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_46113 0 0 2 FXR2 POSTAR2 ENCODE chr16:72141579-72141657
64251 chr17 4859388 4859388 1 + T C UCEC 4859378 + 4859358 4859398 41 CCAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGA CCAGGCCGTTGAGAAGAAGGCCTGCAACTGCCTGCTGCTGA < 41bp 1 0.170686511366857 1 0.042637437582016 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859378 chr17:4859388 synonymous SNV . 0 31 hm5C_associated_SNPs_46114 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859379 + 4859359 4859399 41 CAGGCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAA CAGGCCGTTGAGAAGAAGGCCTGCAACTGCCTGCTGCTGAA < 41bp 1 0.783473896587954 1 0.106052607297897 experiment 0.433052206824092 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859379 chr17:4859388 synonymous SNV . 0 30 hm5C_associated_SNPs_46115 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859382 + 4859362 4859402 41 GCCGTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGT GCCGTTGAGAAGAAGGCCTGCAACTGCCTGCTGCTGAAGGT < 41bp 1 0.414012285923029 1 0.103122055530548 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859382 chr17:4859388 synonymous SNV . 0 27 hm5C_associated_SNPs_46116 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859385 + 4859365 4859405 41 GTTGAGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAA GTTGAGAAGAAGGCCTGCAACTGCCTGCTGCTGAAGGTCAA < 41bp 1 0.69277723306817 1 0.265213936567307 experiment 0.614445533863659 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859385 chr17:4859388 synonymous SNV . 0 24 hm5C_associated_SNPs_46117 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859389 + 4859369 4859409 41 AGAAGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAG AGAAGAAGGCCTGCAACTGCCTGCTGCTGAAGGTCAACCAG < 41bp 1 0.734692643635775 1 0.386936128139496 experiment 0.53061471272845 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859389 chr17:4859388 synonymous SNV . 0 20 hm5C_associated_SNPs_46118 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859392 + 4859372 4859412 41 AGAAGGCCTGCAACTGTCTGCTGCTGAAGGTCAACCAGATC AGAAGGCCTGCAACTGCCTGCTGCTGAAGGTCAACCAGATC < 41bp 1 0.357244872198484 1 0.294537276029587 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859392 chr17:4859388 synonymous SNV . 0 17 hm5C_associated_SNPs_46119 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr17 4859388 4859388 1 + T C UCEC 4859403 + 4859383 4859423 41 AACTGTCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC AACTGCCTGCTGCTGAAGGTCAACCAGATCGGCTCGGTGAC < 41bp 1 0.406448967072482 1 0.269271373748779 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859403 chr17:4859388 synonymous SNV . 0 6 hm5C_associated_SNPs_46120 0 0 4 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr16 22337346 22337346 1 + G A UCEC 22337333 + 22337313 22337353 41 ACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCGGGCTGCG ACAGCAAGCTGGCCAACGGGCTGCCTCTCGGGCAGGCTGCG < 41bp 1 0.302279314605648 1 0.0399198234081268 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control POLR3E ENSG00000058600 CDS Human protein_coding chr16:22337333 chr16:22337346 nonsynonymous SNV 0.024 0 34 hm5C_associated_SNPs_46121 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr16:22337327-22337356
64251 chr6 72011480 72011480 1 + A G UCEC 72011481 + 72011461 72011501 41 TGTTCATTTAAATAGCAAAACAGCTGAAGACAAAAAAGTGG TGTTCATTTAAATAGCAAAGCAGCTGAAGACAAAAAAGTGG < 41bp 1 0.405760289514977 1 0.329290151596069 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72011481 chr6:72011480 nonsynonymous SNV 0.614 0 20 hm5C_associated_SNPs_46122 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr6:72011462-72011489
64251 chr19 39215148 39215148 1 + C T UCEC 39215157 + 39215137 39215177 41 GAGCACCTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGT GAGCACCTGCGTCGCCAGTTCGCCAGCCAGGCCAATGTTGT < 41bp 1 0.727059143272227 1 0.781144142150879 experiment 0.545881713455546 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215157 chr19:39215148 synonymous SNV . 0 12 hm5C_associated_SNPs_46123 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr19 39215148 39215148 1 + C T UCEC 39215163 + 39215143 39215183 41 CTGCGCCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC CTGCGTCGCCAGTTCGCCAGCCAGGCCAATGTTGTGGGGCC < 41bp 1 0.320326227407303 1 0.649632692337036 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215163 chr19:39215148 synonymous SNV . 0 6 hm5C_associated_SNPs_46124 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39215139-39215160
64251 chr17 27027976 27027976 1 + C T UCEC 27027991 + 27027971 27028011 41 CCAGCCCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG CCAGCTCAGCAGCCAGTGGCCACACCACTAATGACCCCTAG < 41bp 1 0.250624687371052 1 0.48588690161705 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27027991 chr17:27027976 synonymous SNV . 0 6 hm5C_associated_SNPs_46125 0 0 2 DDX55 POSTAR2 ENCODE chr17:27027955-27028005
64251 chr4 57881730 57881730 1 + T C UCEC 57881714 + 57881694 57881734 41 GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATTTGTA GAGGGAGATTCGGATCTATACGGATGCAGGCCGTATCTGTA < 41bp 1 0.643195810180705 1 0.807084798812866 experiment 0.713608379638589 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57881714 chr4:57881730 synonymous SNV . 0 37 hm5C_associated_SNPs_46132 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57881674-57881738
64251 chr17 7466577 7466577 1 + C T UCEC 7466589 + 7466569 7466609 41 CAGCCAGACGCCTCCCTGTCCCCCGACCCTCTTTTGATGCC CAGCCAGATGCCTCCCTGTCCCCCGACCCTCTTTTGATGCC < 41bp 1 0.334057571712379 1 0.0677323639392853 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466589 chr17:7466577 nonsynonymous SNV 1.000 0 9 hm5C_associated_SNPs_46133 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7466554-7466597
64251 chr2 216190004 216190004 1 + G A UCEC 216190020 + 216190000 216190040 41 AGTGGCTTCTCCAGGTGTAACTGTTGAGGAGGCTGTGGAGC AGTGACTTCTCCAGGTGTAACTGTTGAGGAGGCTGTGGAGC < 41bp 1 0.355432496085808 1 0.170648664236069 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATIC ENSG00000138363 CDS Human protein_coding chr2:216190020 chr2:216190004 nonsynonymous SNV 1.000 2 5 hm5C_associated_SNPs_46138 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:216189984-216190013
64251 chr20 3520913 3520913 1 + A G UCEC 3520926 + 3520906 3520946 41 GCTACAGAGTGTAGTTGGGACCATTTATATGTTTATGATGG GCTACAGGGTGTAGTTGGGACCATTTATATGTTTATGATGG < 41bp 1 0.0245581616859226 1 0.15489250421524 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ATRN ENSG00000088812 CDS Human protein_coding chr20:3520926 chr20:3520913 nonsynonymous SNV 0.998 4 8 hm5C_associated_SNPs_46139 0 0 2 LIN28B POSTAR2 ENCODE chr20:3520898-3520942
64251 chr21 46900031 46900031 1 + T C UCEC 46900048 + 46900028 46900068 41 GCCTCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC GCCCCCAGGGCCCCCAGGACCCTCCTTCAGACACGACAAGC < 41bp 1 0.0539599184222563 1 0.054591178894043 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46900048 chr21:46900031 synonymous SNV . 0 4 hm5C_associated_SNPs_46140 0 0 8 BUD13 POSTAR2 ENCODE chr21:46899984-46900042
64251 chr19 10789836 10789836 1 + C G UCEC 10789854 + 10789834 10789874 41 CTCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG CTGGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGG < 41bp 1 0.0834231227477826 1 0.0759552419185638 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789854 chr19:10789836 nonsynonymous SNV 0.869 4 3 hm5C_associated_SNPs_46142 0 0 24 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr19 10789836 10789836 1 + C G UCEC 10789855 + 10789835 10789875 41 TCGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC TGGCGTGCCCACCTGGGGTCCCCTCCGAGGCTGGGTAAGGC < 41bp 1 0.0349649937452581 1 0.173125296831131 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789855 chr19:10789836 nonsynonymous SNV 0.869 4 2 hm5C_associated_SNPs_46143 0 0 24 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr17 79668142 79668142 1 + A G UCEC 79668148 + 79668128 79668168 41 CTACATCGCGGGGCAGCAGCCCATGTACCAGCAGGTGAGCC CTACATCGCGGGGCGGCAGCCCATGTACCAGCAGGTGAGCC < 41bp 1 0.210646027932448 1 0.715174078941345 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control HGS ENSG00000185359 CDS Human protein_coding chr17:79668148 chr17:79668142 nonsynonymous SNV 0.985 2 15 hm5C_associated_SNPs_46147 0 0 4 DDX24 POSTAR2 ENCODE chr17:79668104-79668161
64251 chr19 541405 541405 1 + C T UCEC 541393 + 541373 541413 41 CGTGACGGCGTGAAGGTGCCCACCACGCTGGCCGAGTACTG CGTGACGGCGTGAAGGTGCCCACCACGCTGGCTGAGTACTG < 41bp 1 0.765504677197585 1 0.129822313785553 experiment 0.468990645604831 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CDC34 ENSG00000099804 CDS Human protein_coding chr19:541393 chr19:541405 synonymous SNV . 0 33 hm5C_associated_SNPs_46148 0 0 3 CPSF2 POSTAR2 GSE37401,GSM917670 chr19:541372-541410
64251 chr3 43389360 43389360 1 + A G UCEC 43389379 + 43389359 43389399 41 CAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAA CGGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAA < 41bp 1 0.366847113509279 1 0.191638231277466 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SNRK ENSG00000163788 CDS Human protein_coding chr3:43389379 chr3:43389360 nonsynonymous SNV 0.975 4 2 hm5C_associated_SNPs_46149 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:43389338-43389361
64251 chr21 46897362 46897362 1 + G T UCEC 46897353 + 46897333 46897373 41 CTTCCTGGCTCAGATTCTGTCTCCACGTGGGACGGGAGTGT CTTCCTGGCTCAGATTCTGTCTCCACGTGTGACGGGAGTGT < 41bp 1 0.432188637537067 1 0.958520412445068 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122266;BS-seq with improved protocol;Liver;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control COL18A1 ENSG00000182871 CDS Human protein_coding chr21:46897353 chr21:46897362 nonsynonymous SNV 0.025 2 30 hm5C_associated_SNPs_46150 0 0 13 BUD13 POSTAR2 ENCODE chr21:46897324-46897394
64251 chr19 13054652 13054652 1 + G T UCEC 13054643 + 13054623 13054663 41 GACAAGGAGGATGATGAGGACAAAGATGAGGATGAGGAGGA GACAAGGAGGATGATGAGGACAAAGATGATGATGAGGAGGA < 41bp 1 0.534478396820135 1 0.40686497092247 experiment 0.931043206359729 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout CALR ENSG00000179218 CDS Human protein_coding chr19:13054643 chr19:13054652 nonsynonymous SNV 0.222 0 30 hm5C_associated_SNPs_46151 0 0 83 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13054520-13054660
64251 chr16 697459 697459 1 + G A UCEC 697463 + 697443 697483 41 GTGTGAATGGCCGGCGGGCCCCCTCCACGTCCCCATCCTTC GTGTGAATGGCCGGCGAGCCCCCTCCACGTCCCCATCCTTC < 41bp 1 0.151075399504603 1 0.119146078824997 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MCRIP2 ENSG00000172366 CDS Human protein_coding chr16:697463 chr16:697459 synonymous SNV . 0 17 hm5C_associated_SNPs_46152 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:697440-697460
64251 chr19 36128137 36128137 1 + C T UCEC 36128142 + 36128122 36128162 41 GCCTTCAGCCGCTTCCCATCCTTCCTTAAGGCCAAGGTGAT GCCTTCAGCCGCTTCTCATCCTTCCTTAAGGCCAAGGTGAT < 41bp 1 0.194566997481515 1 0.418761104345322 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128142 chr19:36128137 nonsynonymous SNV 1.000 3 16 hm5C_associated_SNPs_46153 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36128087-36128139
64251 chr15 39876553 39876553 1 + A G UCEC 39876541 + 39876521 39876561 41 GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTATCACAACG GGCCAATGAGCTGAGGCGGCCTCCCCTATGCTGTCACAACG < 41bp 1 0.179570611832404 1 0.319289863109589 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876541 chr15:39876553 nonsynonymous SNV 0.994 1 33 hm5C_associated_SNPs_46154 0 0 1 SND1 POSTAR2 ENCODE chr15:39876520-39876562
64251 chr7 142991775 142991775 1 + G A UCEC 142991795 + 142991775 142991815 41 GCTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTC ACTCTGGAGGGGATGTGGACCACAGTACTCTAGTCACCCTC < 41bp 1 0.784212270591202 1 0.612653374671936 experiment 0.431575458817596 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CASP2 ENSG00000106144 CDS Human protein_coding chr7:142991795 chr7:142991775 nonsynonymous SNV 1.000 4 1 hm5C_associated_SNPs_46156 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:142991729-142991775
64251 chr4 144442689 144442689 1 + G A UCEC 144442679 + 144442659 144442699 41 TCAGAAGACTCCAACTTCACCTTTGAAGATGAAACCAGGGC TCAGAAGACTCCAACTTCACCTTTGAAGATAAAACCAGGGC < 41bp 1 0.142531759980697 1 0.0569127202033997 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144442679 chr4:144442689 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_46157 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:144442680-144442700
64251 chrX 48564950 48564950 1 + G T UCEC 48564940 + 48564920 48564960 41 TCATAGACAACCTTGACGAGCGGCTGCCCCGCATCGCTTTC TCATAGACAACCTTGACGAGCGGCTGCCCCTCATCGCTTTC < 41bp 1 0.369826935201929 1 0.153729259967804 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48564940 chrX:48564950 nonsynonymous SNV 0.163 3 31 hm5C_associated_SNPs_46158 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:48564939-48564964
64251 chr3 52233369 52233369 1 + G T UCEC 52233380 + 52233360 52233400 41 AAGATGATGGAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT AAGATGATGTAAGTTGGGGCCAAGCCAGCCCCTCGGGCATT < 41bp 1 0.437009927609901 1 0.270919144153595 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233380 chr3:52233369 stopgain 1.000 1 10 hm5C_associated_SNPs_46159 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:52233355-52233383
64251 chr2 99985924 99985924 1 + C T UCEC 99985908 + 99985888 99985928 41 AAGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGACACCA AAGTTATGGAACAAGGAGTACCAGAAAAGGAAGAGATACCA < 41bp 1 0.512323529893926 1 0.209429919719696 experiment 0.975352940212147 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF5B ENSG00000158417 CDS Human protein_coding chr2:99985908 chr2:99985924 nonsynonymous SNV 0.997 0 37 hm5C_associated_SNPs_46160 0 0 11 BUD13 POSTAR2 ENCODE chr2:99985863-99985951
64251 chr8 56699489 56699489 1 + T C UCEC 56699490 + 56699470 56699510 41 CCTGTACAAGTCATGATGGTCATCAACAGCTAAGTGAAGTT CCTGTACAAGTCATGATGGCCATCAACAGCTAAGTGAAGTT < 41bp 1 0.398048078450762 1 0.339741617441177 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699490 chr8:56699489 synonymous SNV . 0 20 hm5C_associated_SNPs_46161 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:56699364-56699493
64251 chr15 81221511 81221511 1 + G T UCEC 81221501 + 81221481 81221521 41 TTGGACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGT TTGGACCATAGCGGAAGGACCCTCCCTATATGCCAGTAGGT < 41bp 1 0.0134894098352 1 0.0606480538845062 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221501 chr15:81221511 nonsynonymous SNV 0.990 3 31 hm5C_associated_SNPs_46162 0 0 2 PRPF8 POSTAR2 ENCODE chr15:81221509-81221545
64251 chr15 81221511 81221511 1 + G T UCEC 81221505 + 81221485 81221525 41 ACCATAGCGGAAGGACCCTCCCTATAGGCCAGTAGGTTTGC ACCATAGCGGAAGGACCCTCCCTATATGCCAGTAGGTTTGC < 41bp 1 0.0319974503384934 1 0.28072589635849 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CEMIP ENSG00000103888 CDS Human protein_coding chr15:81221505 chr15:81221511 nonsynonymous SNV 0.990 3 27 hm5C_associated_SNPs_46163 0 0 2 PRPF8 POSTAR2 ENCODE chr15:81221509-81221545
64251 chr20 62904594 62904594 1 + C A UCEC 62904609 + 62904589 62904629 41 GCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACC GCAGCATCCAGGACTTGGCTCGCATCGCCATCCGGGGCACC < 41bp 1 0.398631438528777 1 0.0248070955276489 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904609 chr20:62904594 nonsynonymous SNV 0.886 4 6 hm5C_associated_SNPs_46164 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr20:62904589-62904610
64251 chr17 694918 694918 1 + G A UCEC 694913 + 694893 694933 41 CGGGTCTATGTGGCTGACAACTGTGGCCTTTATGCCCAGGC CGGGTCTATGTGGCTGACAACTGTGACCTTTATGCCCAGGC < 41bp 1 0.324139161537088 1 0.199064761400223 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control MRM3 ENSG00000171861 CDS Human protein_coding chr17:694913 chr17:694918 nonsynonymous SNV 0.796 0 26 hm5C_associated_SNPs_46165 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:694887-694931
64251 chr5 150028786 150028786 1 + G A UCEC 150028797 + 150028777 150028817 41 AACTTCACTGCACCCCCCACCTACACTGAGACCTTGTCCAC AACTTCACTACACCCCCCACCTACACTGAGACCTTGTCCAC < 41bp 1 0.490348797090841 1 0.779803872108459 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control SYNPO ENSG00000171992 CDS Human protein_coding chr5:150028797 chr5:150028786 nonsynonymous SNV 0.417 1 10 hm5C_associated_SNPs_46166 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:150028786-150028860
64251 chr6 44197446 44197446 1 + G A UCEC 44197431 + 44197411 44197451 41 CTGCAGCACCCTTGCCTGAGCGGAACTCTCTCAGTGCCATC CTGCAGCACCCTTGCCTGAGCGGAACTCTCTCAGTACCATC < 41bp 1 0.714970548256969 1 0.113504499197006 experiment 0.570058903486061 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197431 chr6:44197446 nonsynonymous SNV 0.998 0 36 hm5C_associated_SNPs_46167 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44197433-44197464
64251 chr1 117638858 117638858 1 + C A UCEC 117638864 + 117638844 117638884 41 GCCACCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGA GCCACCATCGATGGATCTGTCAATCCCAAGCAGAGAATGGA < 41bp 1 0.122863185623703 1 0.201146602630615 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117638864 chr1:117638858 synonymous SNV . 0 15 hm5C_associated_SNPs_46168 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:117638784-117638908
64251 chr1 117638858 117638858 1 + C A UCEC 117638868 + 117638848 117638888 41 CCATCGATGGCTCTGTCAATCCCAAGCAGAGAATGGACTTG CCATCGATGGATCTGTCAATCCCAAGCAGAGAATGGACTTG < 41bp 1 0.676367325271607 1 0.169641822576523 experiment 0.647265349456785 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTF2 ENSG00000116830 CDS Human protein_coding chr1:117638868 chr1:117638858 synonymous SNV . 0 11 hm5C_associated_SNPs_46169 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:117638784-117638908
64251 chr2 233697633 233697633 1 + C T UCEC 233697652 + 233697632 233697672 41 GCTGCGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGG GTTGCGGATGGAAGAGGAGGCAGCCAGACTCCGGCATGAGG < 41bp 1 0.297932872510288 1 0.304704129695892 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233697652 chr2:233697633 synonymous SNV . 0 2 hm5C_associated_SNPs_46170 0 0 27 AGGF1 POSTAR2 ENCODE chr2:233697618-233697682
64251 chr17 7814173 7814173 1 + G A UCEC 7814192 + 7814172 7814212 41 CGCCGGGTCCCTACGCTACACCTCCGGGGTACGGGGCGGCC CACCGGGTCCCTACGCTACACCTCCGGGGTACGGGGCGGCC < 41bp 1 0.0959590763844673 1 0.0334808826446533 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control CHD3 ENSG00000170004 CDS Human protein_coding chr17:7814192 chr17:7814173 nonsynonymous SNV 0.998 0 2 hm5C_associated_SNPs_46171 0 0 1 SF3B4 POSTAR2 ENCODE chr17:7814126-7814183
64251 chr4 517562 517562 1 + C T UCEC 517553 + 517533 517573 41 GACAAAGGCCACGGAAGCCCCTCTACCTCCGAAGTGCTCAG GACAAAGGCCACGGAAGCCCCTCTACCTCTGAAGTGCTCAG < 41bp 1 0.611005367557543 1 0.800771474838257 experiment 0.777989264884914 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122260;BS-seq with improved protocol;HEK293T;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PIGG ENSG00000174227 CDS Human protein_coding chr4:517553 chr4:517562 synonymous SNV . 0 30 hm5C_associated_SNPs_46172 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:517536-517572
64251 chr9 35792593 35792593 1 + A G UCEC 35792598 + 35792578 35792618 41 GGGCACTGCCCGTGGACCTGCGGTTTGTCAGCTCCGAACTG GGGCACTGCCCGTGGGCCTGCGGTTTGTCAGCTCCGAACTG < 41bp 1 0.583927059856043 1 0.502557396888733 experiment 0.832145880287914 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792598 chr9:35792593 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_46173 0 0 2 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr1 180165729 180165729 1 + C T UCEC 180165711 + 180165691 180165731 41 CCCCCACAAACACCACCCCACATGTGCCGGCTGAGGGACCT CCCCCACAAACACCACCCCACATGTGCCGGCTGAGGGATCT < 41bp 1 0.212490423220342 1 0.0132678151130676 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control QSOX1 ENSG00000116260 CDS Human protein_coding chr1:180165711 chr1:180165729 nonsynonymous SNV 0.001 0 39 hm5C_associated_SNPs_46174 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:180165699-180165732
64251 chr11 66249810 66249810 1 + G A UCEC 66249791 + 66249771 66249811 41 GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGC GCCTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGAC < 41bp 1 0.563560853676143 1 0.196522355079651 experiment 0.872878292647714 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249791 chr11:66249810 nonsynonymous SNV 0.997 2 40 hm5C_associated_SNPs_46175 0 0 1 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249810 66249810 1 + G A UCEC 66249793 + 66249773 66249813 41 CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTG CTACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGACTG < 41bp 1 0.349448054551234 1 0.0616561472415924 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249793 chr11:66249810 nonsynonymous SNV 0.997 2 38 hm5C_associated_SNPs_46176 0 0 1 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 66249810 66249810 1 + G A UCEC 66249794 + 66249774 66249814 41 TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGGCTGT TACCACCTGTCCCGTGCCGCCTGGTACGGAGGCCTGACTGT < 41bp 1 0.675389758752622 1 0.290538221597672 experiment 0.649220482494756 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249794 chr11:66249810 nonsynonymous SNV 0.997 2 37 hm5C_associated_SNPs_46177 0 0 1 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr9 71851980 71851980 1 + C A UCEC 71851967 + 71851947 71851987 41 AGGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGA AGGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTAGGGAAGA < 41bp 1 0.406090835946098 1 0.200028032064438 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851967 chr9:71851980 synonymous SNV . 0 34 hm5C_associated_SNPs_46178 0 0 4 DDX24 POSTAR2 ENCODE chr9:71851925-71851993
64251 chr9 71851980 71851980 1 + C A UCEC 71851968 + 71851948 71851988 41 GGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTCGGGAAGAC GGTCTGGGGTGAAGAAGAACCTGAGGAAAAGTAGGGAAGAC < 41bp 1 0.743642662206975 1 0.663187146186829 experiment 0.512714675586051 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851968 chr9:71851980 synonymous SNV . 0 33 hm5C_associated_SNPs_46179 0 0 4 DDX24 POSTAR2 ENCODE chr9:71851925-71851993
64251 chr14 24909642 24909642 1 - G T UCEC 24909627 - 24909607 24909647 41 TTCGCCTGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAA TTCGCATGGGCCTGGGGGGCCCCATCGGCTCAGGCCACCAA < 41bp 1 0.350520900546347 1 0.182542055845261 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909627 chr14:24909642 nonsynonymous SNV 0.998 3 6 hm5C_associated_SNPs_46180 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr15 41192186 41192186 1 + C T UCEC 41192201 + 41192181 41192221 41 TACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA TACCATGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTA < 41bp 1 0.353165609694373 1 0.447974294424057 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192201 chr15:41192186 synonymous SNV . 0 6 hm5C_associated_SNPs_46182 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr15 41192186 41192186 1 + C T UCEC 41192202 + 41192182 41192222 41 ACCACGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT ACCATGTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTAT < 41bp 1 0.77067548158026 1 0.873128890991211 experiment 0.45864903683948 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192202 chr15:41192186 synonymous SNV . 0 5 hm5C_associated_SNPs_46183 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr11 210617 210617 1 + G A UCEC 210603 + 210583 210623 41 CTTTACCGACACCTGGGGACCCTTCTCCGGCACTGTGTGAT CTTTACCGACACCTGGGGACCCTTCTCCGGCACTATGTGAT < 41bp 1 0.0119402413711057 1 0.064977765083313 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:210603 chr11:210617 nonsynonymous SNV 0.864 4 35 hm5C_associated_SNPs_46184 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:210577-210617
64251 chr2 27900707 27900707 1 + G T UCEC 27900703 + 27900683 27900723 41 TGTCCCGGAAGAAACTTCACCTGAGAACTTTTGAACTGAGG TGTCCCGGAAGAAACTTCACCTGATAACTTTTGAACTGAGG < 41bp 1 0.142343719368489 1 0.325240135192871 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27900703 chr2:27900707 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_46186 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27900681-27900730
64251 chr6 44274727 44274727 1 - G A UCEC 44274726 - 44274706 44274746 41 CGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGCACC CGTCGAGCTGTGCGTTTCTTCATGGAGATCTTAAAGGCACC < 41bp 1 0.58421961217042 1 0.748215079307556 experiment 0.83156077565916 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274726 chr6:44274727 stopgain 0.135 2 20 hm5C_associated_SNPs_46187 0 0 3 GRWD1 POSTAR2 ENCODE chr6:44274661-44274751
64251 chr11 71209484 71209484 1 + G T UCEC 71209490 + 71209470 71209510 41 GCGTACCACGCCGAGAACTACAGCCCTGAGGACAACAGGTT GCGTACCACGCCGATAACTACAGCCCTGAGGACAACAGGTT < 41bp 1 0.197770189371139 1 0.476281434297562 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NADSYN1 ENSG00000172890 CDS Human protein_coding chr11:71209490 chr11:71209484 nonsynonymous SNV 0.336 2 15 hm5C_associated_SNPs_46188 0 0 3 DDX24 POSTAR2 ENCODE chr11:71209479-71209575
64251 chr19 10394229 10394229 1 + G A UCEC 10394220 + 10394200 10394240 41 GCCAGTGGGCAAGAACCTTACCCTACGCTGCCAGGTGGAGG GCCAGTGGGCAAGAACCTTACCCTACGCTACCAGGTGGAGG < 41bp 1 0.384731562523761 1 0.0598515272140503 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394220 chr19:10394229 nonsynonymous SNV 0.765 4 30 hm5C_associated_SNPs_46190 0 0 6 NOL12 POSTAR2 ENCODE chr19:10394224-10394345
64251 chr17 34147398 34147398 1 + T C UCEC 34147392 + 34147372 34147412 41 AGCAGAGCTCATATAGCCAGCAACCATATAATAACCAGGGA AGCAGAGCTCATATAGCCAGCAACCACATAATAACCAGGGA < 41bp 1 0.150339591235523 1 0.412758648395538 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TAF15 ENSG00000172660 CDS Human other chr17:34147392 chr17:34147398 nonsynonymous SNV 0.984 3 27 hm5C_associated_SNPs_46191 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:34147340-34147420
64251 chr19 12036061 12036061 1 + C T UCEC 12036063 + 12036043 12036083 41 CAGGAGCTGTAGAGAGGACCCCGGTACATCTGAAAGCCGGG CAGGAGCTGTAGAGAGGATCCCGGTACATCTGAAAGCCGGG < 41bp 1 0.553731649663116 1 0.377058327198029 experiment 0.892536700673768 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZNF700 ENSG00000196757;ENSG00000197054;ENSG00000267179 CDS Human other chr19:12036063 chr19:12036061 synonymous SNV . 0 19 hm5C_associated_SNPs_46194 0 0 2 DDX3X POSTAR2 ENCODE chr19:12035974-12036065
64251 chr1 249212376 249212376 1 + A G UCEC 249212364 + 249212344 249212384 41 GCCTGTGTGTATCTGGAGAGCAATGCTGACACAACATCTCA GCCTGTGTGTATCTGGAGAGCAATGCTGACACGACATCTCA < 41bp 1 0.447803489303062 1 0.0870522260665894 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212364 chr1:249212376 synonymous SNV . 0 33 hm5C_associated_SNPs_46196 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:249212371-249212412
64251 chr1 64095701 64095701 1 + C T UCEC 64095685 + 64095665 64095705 41 TGAAGAATATGCAGTTTGCCCTGACCTGAAAGTAGACCTTG TGAAGAATATGCAGTTTGCCCTGACCTGAAAGTAGATCTTG < 41bp 1 0.226575005622665 1 0.0332112312316895 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PGM1 ENSG00000079739 CDS Human protein_coding chr1:64095685 chr1:64095701 synonymous SNV . 0 37 hm5C_associated_SNPs_46197 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:64095700-64095701
64251 chr6 155154510 155154510 1 + C T UCEC 155154525 + 155154505 155154545 41 AAGCACAGAAACTGAGGGGACATAATCATCACTCAGTAGGT AAGCATAGAAACTGAGGGGACATAATCATCACTCAGTAGGT < 41bp 1 0.193069292609416 1 0.162731647491455 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155154525 chr6:155154510 nonsynonymous SNV 1.000 3 6 hm5C_associated_SNPs_46198 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:155154450-155154525
64251 chrX 114856647 114856647 1 + G T UCEC 114856664 + 114856644 114856684 41 AGAGAAATTATTCAGAAACTCATGCTGGATGGTGACAGGAA AGATAAATTATTCAGAAACTCATGCTGGATGGTGACAGGAA < 41bp 1 0.262197131177343 1 0.256947785615921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856664 chrX:114856647 stopgain 1.000 1 4 hm5C_associated_SNPs_46200 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:114856560-114856660
64251 chr21 42629179 42629179 1 + C T UCEC 42629163 + 42629143 42629183 41 TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCACGGTG TTTCCCCATCCACAAATGCGCTGGTGATCGGTGCCATGGTG < 41bp 1 0.501480973166727 1 0.113743931055069 experiment 0.997038053666545 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629163 chr21:42629179 nonsynonymous SNV 0.598 4 37 hm5C_associated_SNPs_46201 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr6 7572159 7572159 1 + A C UCEC 7572161 + 7572141 7572181 41 CCAACAGAGAAAATGACAAGCAAGAAACATGGATGCTGATG CCAACAGAGAAAATGACACGCAAGAAACATGGATGCTGATG < 41bp 1 0.476790828449399 1 0.734280943870544 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572161 chr6:7572159 nonsynonymous SNV 1.000 4 19 hm5C_associated_SNPs_46202 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7572126-7572168
64251 chr6 7572159 7572159 1 + A C UCEC 7572176 + 7572156 7572196 41 ACAAGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT ACACGCAAGAAACATGGATGCTGATGGAGCTGCAGAAGATT < 41bp 1 0.204000319701565 1 0.0756571888923645 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DSP ENSG00000096696 CDS Human protein_coding chr6:7572176 chr6:7572159 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_46203 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:7572126-7572168
64251 chr19 10370383 10370383 1 + A G UCEC 10370393 + 10370373 10370413 41 CTCTGGCAGGACTCACGTTACAGACCCCTCTACCCCTTCAG CTCTGGCAGGGCTCACGTTACAGACCCCTCTACCCCTTCAG < 41bp 1 0.533851933953516 1 0.426299393177032 experiment 0.932296132092969 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10370393 chr19:10370383 nonsynonymous SNV 0.807 1 11 hm5C_associated_SNPs_46204 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10370327-10370386
64251 chr2 96686970 96686970 1 + C A UCEC 96686979 + 96686959 96686999 41 GACCTGATAGCCTGGGTGTCCCAGTGAGTGACAGGGGCTAT GACCTGATAGCATGGGTGTCCCAGTGAGTGACAGGGGCTAT < 41bp 1 0.339604799546162 1 0.285600602626801 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FAHD2CP ENSG00000231584 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:96686979 chr2:96686970 . . 0 12 hm5C_associated_SNPs_46205 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:96686969-96686983
64251 chrX 47030523 47030523 1 + G A UCEC 47030525 + 47030505 47030545 41 CCAGGCTTCCCCCGAGACGGCGACTATCGGGACCAGGACTA CCAGGCTTCCCCCGAGACAGCGACTATCGGGACCAGGACTA < 41bp 1 0.598361488119659 1 0.167837381362915 experiment 0.803277023760683 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RBM10 ENSG00000182872 CDS Human protein_coding chrX:47030525 chrX:47030523 nonsynonymous SNV 1.000 3 19 hm5C_associated_SNPs_46206 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:47030518-47030544
64251 chr19 46878973 46878973 1 + G A UCEC 46878977 + 46878957 46878997 41 GGCGACGAGCACAAGCGCTCCGTGGTGGACTCGCTGGACAT GGCGACGAGCACAAGCACTCCGTGGTGGACTCGCTGGACAT < 41bp 1 0.579577721488026 1 0.799529910087585 experiment 0.840844557023948 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PPP5C ENSG00000011485 CDS Human protein_coding chr19:46878977 chr19:46878973 nonsynonymous SNV 0.506 1 17 hm5C_associated_SNPs_46207 0 0 6 GRWD1 POSTAR2 ENCODE chr19:46878904-46879006
64251 chr2 235943686 235943686 1 + C A UCEC 235943692 + 235943672 235943712 41 CCAACTCCAATGGCCTCCCTCGCTGCAAGTCAGAGGGGACC CCAACTCCAATGGCATCCCTCGCTGCAAGTCAGAGGGGACC < 41bp 1 0.225082386578645 1 0.12140753865242 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943692 chr2:235943686 nonsynonymous SNV 0.810 4 15 hm5C_associated_SNPs_46208 0 0 3 DDX3X POSTAR2 ENCODE chr2:235943656-235943692
64251 chr21 30422470 30422470 1 + T G UCEC 30422456 + 30422436 30422476 41 TAACAAACACATAAAGTTTCCGGAAATCTTAGATTTGGCTC TAACAAACACATAAAGTTTCCGGAAATCTTAGATGTGGCTC < 41bp 1 0.771147396732648 1 0.782739818096161 experiment 0.457705206534705 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control USP16 ENSG00000156256 CDS Human protein_coding chr21:30422456 chr21:30422470 nonsynonymous SNV 1.000 3 35 hm5C_associated_SNPs_46209 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr21:30422437-30422473
64251 chr8 100182349 100182349 1 + G A UCEC 100182330 + 100182310 100182350 41 GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAGC GATCTTACTGCTTACCTGTACCAGTTATTCCCTCTTTCAAC < 41bp 1 0.0872746616907182 1 0.117825835943222 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control VPS13B ENSG00000132549 CDS Human protein_coding chr8:100182330 chr8:100182349 nonsynonymous SNV 0.999 3 40 hm5C_associated_SNPs_46211 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:100182339-100182360
64251 chr2 200824514 200824514 1 + C A UCEC 200824505 + 200824485 200824525 41 TGCATTGAAAGAAAAGGTTACTTCACTACCTGACAACCATA TGCATTGAAAGAAAAGGTTACTTCACTACATGACAACCATA < 41bp 1 0.244363223742361 1 0.0672642588615417 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824505 chr2:200824514 nonsynonymous SNV 0.993 2 30 hm5C_associated_SNPs_46212 0 0 2 EWSR1 POSTAR2 SRX029343 chr2:200824491-200824527
64251 chr9 100773633 100773633 1 + G A UCEC 100773650 + 100773630 100773670 41 GATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGA GATATAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGA < 41bp 1 0.695990219015885 1 0.475627332925797 experiment 0.608019561968231 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773650 chr9:100773633 nonsynonymous SNV 0.999 1 4 hm5C_associated_SNPs_46213 0 0 65 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr9 100773633 100773633 1 + G A UCEC 100773653 + 100773633 100773673 41 GTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT ATAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGT < 41bp 1 0.430300607443284 1 0.379448115825653 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout ANP32B ENSG00000136938 CDS Human protein_coding chr9:100773653 chr9:100773633 nonsynonymous SNV 0.999 1 1 hm5C_associated_SNPs_46214 0 0 65 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:100773540-100773640
64251 chr7 157000246 157000246 1 + G T UCEC 157000240 + 157000220 157000260 41 ATAACGAATTCTTCGGTGATCCCATAGAAGGTAAGGATTTT ATAACGAATTCTTCGGTGATCCCATATAAGGTAAGGATTTT < 41bp 1 0.0515850423829563 1 0.0774242579936981 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control UBE3C ENSG00000009335 CDS Human protein_coding chr7:157000240 chr7:157000246 stopgain 1.000 1 27 hm5C_associated_SNPs_46215 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr7:157000154-157000246
64251 chr2 45879525 45879525 1 + G A UCEC 45879512 + 45879492 45879532 41 CACGATGCCCCCATAGGCTACGACGACTTCGTGGCCAACTG CACGATGCCCCCATAGGCTACGACGACTTCGTGACCAACTG < 41bp 1 0.268508666514157 1 0.169610321521759 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PRKCE ENSG00000171132 CDS Human protein_coding chr2:45879512 chr2:45879525 nonsynonymous SNV 1.000 4 34 hm5C_associated_SNPs_46216 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:45879505-45879532
64251 chr15 99434678 99434678 1 + C A UCEC 99434698 + 99434678 99434718 41 CTATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCT ATATGCCGGTGTCTGTGTGCCTGCCTGCCCGCCCAACACCT < 41bp 1 0.255672130709456 1 0.488168984651566 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control IGF1R ENSG00000140443 CDS Human protein_coding chr15:99434698 chr15:99434678 stopgain 0.949 0 1 hm5C_associated_SNPs_46217 0 0 5 EWSR1 POSTAR2 SRX029344 chr15:99434668-99434692
64251 chr2 118582618 118582618 1 + T C UCEC 118582619 + 118582599 118582639 41 CTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGT CTTCTTTTCATCTTGTATGCCTGTGAAATACCACTATGAGT < 41bp 1 0.326184556002065 1 0.208222210407257 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582619 chr2:118582618 nonsynonymous SNV 0.832 4 20 hm5C_associated_SNPs_46218 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:118582593-118582625
64251 chr3 52245358 52245358 1 + G A UCEC 52245356 + 52245336 52245376 41 CACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTG CACGAGTTCTCTGATTGACACCATACGGTCCTATGCTGCTG < 41bp 1 0.292713958049217 1 0.144481778144836 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245356 chr3:52245358 nonsynonymous SNV 0.031 1 23 hm5C_associated_SNPs_46219 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr3 52245358 52245358 1 + G A UCEC 52245357 + 52245337 52245377 41 ACGAGTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGG ACGAGTTCTCTGATTGACACCATACGGTCCTATGCTGCTGG < 41bp 1 0.129355172011371 1 0.286707162857056 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245357 chr3:52245358 nonsynonymous SNV 0.031 1 22 hm5C_associated_SNPs_46220 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr3 52245358 52245358 1 + G A UCEC 52245361 + 52245341 52245381 41 GTTCTCTGATTGACACCGTACGGTCCTATGCTGCTGGCTTC GTTCTCTGATTGACACCATACGGTCCTATGCTGCTGGCTTC < 41bp 1 0.413683213244099 1 0.520476758480072 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52245361 chr3:52245358 nonsynonymous SNV 0.031 1 18 hm5C_associated_SNPs_46221 0 0 1 YBX3 POSTAR2 ENCODE chr3:52245345-52245438
64251 chr12 112915760 112915760 1 + G A UCEC 112915765 + 112915745 112915785 41 GACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGAT GACTTTTGGCGGATGATGTTCCAAGAAAACTCCCGAGTGAT < 41bp 1 0.268103190182488 1 0.360567986965179 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915765 chr12:112915760 nonsynonymous SNV 0.995 2 16 hm5C_associated_SNPs_46222 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr12 112915760 112915760 1 + G A UCEC 112915766 + 112915746 112915786 41 ACTTTTGGCGGATGGTGTTCCAAGAAAACTCCCGAGTGATT ACTTTTGGCGGATGATGTTCCAAGAAAACTCCCGAGTGATT < 41bp 1 0.7939052058123 1 0.367148876190186 experiment 0.412189588375399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915766 chr12:112915760 nonsynonymous SNV 0.995 2 15 hm5C_associated_SNPs_46223 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr22 30413916 30413916 1 + G A UCEC 30413919 + 30413899 30413939 41 TCCTCCCCCCTCCTCAGGTGCTGTACCCTGTGTGCCATGTG TCCTCCCCCCTCCTCAGATGCTGTACCCTGTGTGCCATGTG < 41bp 1 0.218401667092346 1 0.132720112800598 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30413919 chr22:30413916 nonsynonymous SNV 1.000 5 18 hm5C_associated_SNPs_46225 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr22:30413916-30413957
64251 chr1 82372844 82372844 1 + T C UCEC 82372824 + 82372804 82372844 41 TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGT TTGAGAGCGCTAACTATGGTCGGACGGATGACAAGATTTGC < 41bp 1 0.297536557448165 1 0.383719503879547 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82372824 chr1:82372844 synonymous SNV . 0 41 hm5C_associated_SNPs_46226 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:82372789-82372897
64251 chrX 69370142 69370142 1 + C T UCEC 69370124 + 69370104 69370144 41 GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTACCG GTGACTGGTATGAGCAACATCGGAAATATGGAGCATTATCG < 41bp 1 0.771516267520002 1 0.445402860641479 experiment 0.456967464959996 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control IGBP1 ENSG00000089289 CDS Human protein_coding chrX:69370124 chrX:69370142 nonsynonymous SNV 0.989 1 39 hm5C_associated_SNPs_46227 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69370097-69370156
64251 chr17 73567082 73567082 1 + C A UCEC 73567066 + 73567046 73567086 41 GCCAAGGCTGAGCGGCCAGGCCTCCAGAACATGGAGCTGGC GCCAAGGCTGAGCGGCCAGGCCTCCAGAACATGGAGATGGC < 41bp 1 0.0728287118903408 1 0.36929851770401 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control LLGL2 ENSG00000073350 CDS Human protein_coding chr17:73567066 chr17:73567082 nonsynonymous SNV 0.998 3 37 hm5C_associated_SNPs_46230 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:73567054-73567085
64251 chr22 38028092 38028092 1 + G A UCEC 38028074 + 38028054 38028094 41 TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACGTG TCCATTTTGCCCGGGACCCACTGCCAGGGCGCTCCGACATG < 41bp 1 0.388600627837407 1 0.0536634922027588 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38028074 chr22:38028092 nonsynonymous SNV 0.985 4 39 hm5C_associated_SNPs_46231 0 0 1 ZNF622 POSTAR2 ENCODE chr22:38028056-38028102
64251 chr19 13004418 13004418 1 + C A UCEC 13004401 + 13004381 13004421 41 CGATGAGTGTCCAGTCCTCCCTCGTCATGCACCCTATCTAT CGATGAGTGTCCAGTCCTCCCTCGTCATGCACCCTATATAT < 41bp 1 0.698646828169272 1 0.0597171485424042 experiment 0.602706343661456 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control GCDH ENSG00000105607 CDS Human protein_coding chr19:13004401 chr19:13004418 nonsynonymous SNV . 0 38 hm5C_associated_SNPs_46232 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13004400-13004420
64251 chr16 19548850 19548850 1 + G T UCEC 19548865 + 19548845 19548885 41 AAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA AAAAATATACCCTAAGGGATCTGGCTTCGTTAACAAGAATA < 41bp 1 0.383645188605308 1 0.173627018928528 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CCP110 ENSG00000103540 CDS Human protein_coding chr16:19548865 chr16:19548850 nonsynonymous SNV 0.994 2 6 hm5C_associated_SNPs_46233 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:19548850-19548873
64251 chr16 30964935 30964935 1 + T C UCEC 30964947 + 30964927 30964967 41 CAGCACCGTCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA CAGCACCGCCCCAAGCTGAGCCAGCCTGCCCACCCCGGCAA < 41bp 1 0.299854360083755 1 0.0853093564510345 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964947 chr16:30964935 nonsynonymous SNV 0.010 0 9 hm5C_associated_SNPs_46234 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr11 67018221 67018221 1 + G A UCEC 67018208 + 67018188 67018228 41 AGGTCTGGATGTCTGTCTTCCGCTACCTCAGCCGCAGAGAA AGGTCTGGATGTCTGTCTTCCGCTACCTCAGCCACAGAGAA < 41bp 1 0.449314879956816 1 0.605103254318237 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control KDM2A ENSG00000173120 CDS Human protein_coding chr11:67018208 chr11:67018221 nonsynonymous SNV 1.000 1 34 hm5C_associated_SNPs_46235 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:67018196-67018228
64251 chr2 74077587 74077587 1 + G T UCEC 74077580 + 74077560 74077600 41 GATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCAT GATTACTGCAACACAGAGAACGAAGAATAACTTTTCCTCAT < 41bp 1 0.605341357579748 1 0.506510555744171 experiment 0.789317284840503 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077580 chr2:74077587 stopgain 1.000 1 28 hm5C_associated_SNPs_46236 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74077547-74077615
64251 chr4 57876582 57876582 1 + C A UCEC 57876563 + 57876543 57876583 41 CTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTCT CTTTTGCGTCTACTCTTTCTCACCTGCGTCGTTTAAATTAT < 41bp 1 0.633013362841597 1 0.414021641016006 experiment 0.733973274316805 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control POLR2B ENSG00000047315 CDS Human protein_coding chr4:57876563 chr4:57876582 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_46237 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:57876532-57876584
64251 chr17 7402704 7402704 1 + C A UCEC 7402691 + 7402671 7402711 41 CGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATG CGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCATCGCATG < 41bp 1 0.358353775580628 1 0.557013154029846 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control POLR2A ENSG00000181222 CDS Human protein_coding chr17:7402691 chr17:7402704 nonsynonymous SNV 0.999 1 34 hm5C_associated_SNPs_46238 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr17:7402676-7402705
64251 chr7 92987679 92987679 1 + C T UCEC 92987685 + 92987665 92987705 41 GTTTGCCTGGGATCCCATATCAATAAGAAAGCAAGACAAAA GTTTGCCTGGGATCTCATATCAATAAGAAAGCAAGACAAAA < 41bp 1 0.530144466139446 1 0.341527998447418 experiment 0.939711067721109 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control VPS50 ENSG00000004766 CDS Human protein_coding chr7:92987685 chr7:92987679 synonymous SNV . 0 15 hm5C_associated_SNPs_46242 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:92987653-92987681
64251 chr17 38320059 38320059 1 + C A UCEC 38320054 + 38320034 38320074 41 ATCTCCAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGA ATCTCCAGAAGCAGATGCTCCAGTGATTGGCAGTCCTGAGA < 41bp 1 0.491984818502327 1 0.310342043638229 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320054 chr17:38320059 nonsynonymous SNV 0.994 0 26 hm5C_associated_SNPs_46245 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr17 38320059 38320059 1 + C A UCEC 38320064 + 38320044 38320084 41 GCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGC GCAGATGCTCCAGTGATTGGCAGTCCTGAGAAGGAAGAGGC < 41bp 1 0.254662131816761 1 0.172947973012924 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320064 chr17:38320059 nonsynonymous SNV 0.994 0 16 hm5C_associated_SNPs_46246 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr17 38320059 38320059 1 + C A UCEC 38320069 + 38320049 38320089 41 TGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGCAGCCT TGCTCCAGTGATTGGCAGTCCTGAGAAGGAAGAGGCAGCCT < 41bp 1 0.621106313611328 1 0.217439770698547 experiment 0.757787372777343 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320069 chr17:38320059 nonsynonymous SNV 0.994 0 11 hm5C_associated_SNPs_46247 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr3 141644482 141644482 1 + G A UCEC 141644475 + 141644455 141644495 41 AGATTGATGGATCAGCCAACCTAAAAAGTCAGGATGATCGT AGATTGATGGATCAGCCAACCTAAAAAATCAGGATGATCGT < 41bp 1 0.689179195057964 1 0.512169063091278 experiment 0.621641609884072 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141644475 chr3:141644482 nonsynonymous SNV 0.975 0 28 hm5C_associated_SNPs_46248 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:141644465-141644490
64251 chr7 56136278 56136278 1 + G T UCEC 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCTAC < 41bp 1 0.618410999477053 1 0.719937384128571 experiment 0.763178001045893 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136278 synonymous SNV . 0 39 hm5C_associated_SNPs_46249 0 0 1 RPS3 POSTAR2 ENCODE chr7:56136260-56136305
64251 chr16 68104961 68104961 1 + A G UCEC 68104973 + 68104953 68104993 41 TCTTCCTCAAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG TCTTCCTCGAGGAGGGTCTGCGGCCCCTGGAGGAGGTCATG < 41bp 1 0.263483305997233 1 0.568089962005615 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUS2 ENSG00000167264 CDS Human protein_coding chr16:68104973 chr16:68104961 nonsynonymous SNV 0.999 0 9 hm5C_associated_SNPs_46251 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:68104931-68104963
64251 chr19 14024278 14024278 1 + C T UCEC 14024290 + 14024270 14024310 41 GGACATCCCGCCGCCAGTGGCCATAGGAAAAGGCCCGGCGT GGACATCCTGCCGCCAGTGGCCATAGGAAAAGGCCCGGCGT < 41bp 1 0.269513656204536 1 0.215042024850845 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14024290 chr19:14024278 nonsynonymous SNV 0.163 4 9 hm5C_associated_SNPs_46253 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:14024278-14024279
64251 chrX 24073092 24073092 1 + G A UCEC 24073094 + 24073074 24073114 41 TCTTTTGGCAACATGGCGGGCGGAGAAGCTGGAGTGACTCT TCTTTTGGCAACATGGCGAGCGGAGAAGCTGGAGTGACTCT < 41bp 1 0.727545946636636 1 0.500620722770691 experiment 0.544908106726727 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24073094 chrX:24073092 nonsynonymous SNV 0.565 1 19 hm5C_associated_SNPs_46260 0 0 18 SRSF1 POSTAR2 GSE83923,GSM2221667 chrX:24073080-24073100
64251 chr8 104452453 104452453 1 + T C UCEC 104452461 + 104452441 104452481 41 GATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAATGCT GATCTGATGAAACGAACATTCGCCTGTGGAAAGCTAATGCT < 41bp 1 0.759959114209145 1 0.245071172714233 experiment 0.48008177158171 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104452461 chr8:104452453 nonsynonymous SNV 1.000 1 13 hm5C_associated_SNPs_46262 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:104452376-104452483
64251 chr4 164440656 164440656 1 + C T UCEC 164440671 + 164440651 164440691 41 GACTGCAGTGGCCTAATTGTCTTCACTTGAATTGAAAATAA GACTGTAGTGGCCTAATTGTCTTCACTTGAATTGAAAATAA < 41bp 1 0.755212431604135 1 0.750389337539673 experiment 0.48957513679173 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control TMA16 ENSG00000198498 CDS Human protein_coding chr4:164440671 chr4:164440656 nonsynonymous SNV 0.984 0 6 hm5C_associated_SNPs_46264 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:164440575-164440665
64251 chr17 60768361 60768361 1 + G A UCEC 60768363 + 60768343 60768383 41 TGAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGC TGAACTACTCCAACTGGGAGCCCCCGGGCTTGGGCCCCAGC < 41bp 1 0.0393081887934709 1 0.180947184562683 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768363 chr17:60768361 nonsynonymous SNV 0.682 1 19 hm5C_associated_SNPs_46265 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768364 + 60768344 60768384 41 GAACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCA GAACTACTCCAACTGGGAGCCCCCGGGCTTGGGCCCCAGCA < 41bp 1 0.179533839439307 1 0.736636638641357 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768364 chr17:60768361 nonsynonymous SNV 0.682 1 18 hm5C_associated_SNPs_46266 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768365 + 60768345 60768385 41 AACTACTCCAACTGGGGGCCCCCGGGCTTGGGCCCCAGCAT AACTACTCCAACTGGGAGCCCCCGGGCTTGGGCCCCAGCAT < 41bp 1 0.278732189956025 1 0.866318345069885 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768365 chr17:60768361 nonsynonymous SNV 0.682 1 17 hm5C_associated_SNPs_46267 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768377 + 60768357 60768397 41 TGGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA TGGGAGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAA < 41bp 1 0.395328595059909 1 0.215926051139832 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768377 chr17:60768361 nonsynonymous SNV 0.682 1 5 hm5C_associated_SNPs_46268 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768378 + 60768358 60768398 41 GGGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC GGGAGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAAC < 41bp 1 0.115951536380853 1 0.261010706424713 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768378 chr17:60768361 nonsynonymous SNV 0.682 1 4 hm5C_associated_SNPs_46269 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768379 + 60768359 60768399 41 GGGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA GGAGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACA < 41bp 1 0.0816602702342588 1 0.294061660766602 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768379 chr17:60768361 nonsynonymous SNV 0.682 1 3 hm5C_associated_SNPs_46270 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr17 60768361 60768361 1 + G A UCEC 60768380 + 60768360 60768400 41 GGGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG GAGCCCCCGGGCTTGGGCCCCAGCATGCTGAGCCACAACAG < 41bp 1 0.616163982110186 1 0.555516481399536 experiment 0.767672035779628 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control MRC2 ENSG00000011028 CDS Human protein_coding chr17:60768380 chr17:60768361 nonsynonymous SNV 0.682 1 2 hm5C_associated_SNPs_46271 0 0 1 METAP2 POSTAR2 ENCODE chr17:60768338-60768411
64251 chr2 201761827 201761827 1 + G A UCEC 201761826 + 201761806 201761846 41 TTCTACATACTGGAATGGGACGGTTATGCACACTGGATGAA TTCTACATACTGGAATGGGACAGTTATGCACACTGGATGAA < 41bp 1 0.233751622247701 1 0.0319335758686066 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201761826 chr2:201761827 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_46272 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:201761811-201761827
64251 chr15 43632501 43632501 1 + C T UCEC 43632491 + 43632471 43632511 41 AGATGTCATAAAAGAATTTGCAGATGACGGCGTCAAGTACC AGATGTCATAAAAGAATTTGCAGATGACGGTGTCAAGTACC < 41bp 1 0.408233731022185 1 0.646604299545288 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control ADAL ENSG00000168803 CDS Human protein_coding chr15:43632491 chr15:43632501 synonymous SNV . 0 31 hm5C_associated_SNPs_46274 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr15:43632496-43632538
64251 chr16 56867238 56867238 1 + G A UCEC 56867224 + 56867204 56867244 41 GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCGCTGCCA GCAGTTGCCTTTCTTTTCCGCATGGAGCGGCTGCACTGCCA < 41bp 1 0.446386791038303 1 0.102177023887634 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867224 chr16:56867238 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_46275 0 0 4 FMR1 POSTAR2 ENCODE chr16:56867217-56867272
64251 chr15 101169707 101169707 1 + C T UCEC 101169701 + 101169681 101169721 41 CTCTTCACTATGCAGCCATGCATGGCCGGGCCCGCATTGCA CTCTTCACTATGCAGCCATGCATGGCTGGGCCCGCATTGCA < 41bp 1 0.46036108640579 1 0.035459041595459 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169701 chr15:101169707 nonsynonymous SNV 1.000 3 27 hm5C_associated_SNPs_46276 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:101169702-101169736
64251 chr1 43900122 43900122 1 + G T UCEC 43900109 + 43900089 43900129 41 CTGAGTGTCGCCACCTGCAGCAGCTCCTGGTGAGGCGAGTT CTGAGTGTCGCCACCTGCAGCAGCTCCTGGTGATGCGAGTT < 41bp 1 0.104935202272359 1 0.471490681171417 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SZT2 ENSG00000198198 CDS Human protein_coding chr1:43900109 chr1:43900122 nonsynonymous SNV 0.999 3 34 hm5C_associated_SNPs_46278 0 0 1 BUD13 POSTAR2 ENCODE chr1:43900047-43900177
64251 chr11 107917088 107917088 1 + G A UCEC 107917091 + 107917071 107917111 41 TTGAGTTTATTAAGCAAGCACAGGCAGTAAGTTCTACATGC TTGAGTTTATTAAGCAAACACAGGCAGTAAGTTCTACATGC < 41bp 1 0.516094730374704 1 0.502670049667358 experiment 0.967810539250593 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient CUL5 ENSG00000166266 CDS Human protein_coding chr11:107917091 chr11:107917088 nonsynonymous SNV 1.000 2 18 hm5C_associated_SNPs_46279 0 0 2 DDX24 POSTAR2 ENCODE chr11:107917060-107917100
64251 chr11 20139709 20139709 1 + G A UCEC 20139725 + 20139705 20139745 41 GGCAGCCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT GGCAACCAACTACTCCAGCCCCCAGAGCTATGACAGCGACT < 41bp 1 0.0586670951025296 1 0.47314265370369 experiment 1 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control NAV2 ENSG00000166833 CDS Human protein_coding chr11:20139725 chr11:20139709 nonsynonymous SNV 0.994 4 5 hm5C_associated_SNPs_46280 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:20139693-20139722
64251 chr1 32680480 32680480 1 - C A UCEC 32680487 - 32680467 32680507 41 TTGCTTCTTGGCTGAATGGTCTGCTGGGGTCTGGCATAGAA TTGCTTCTTGGCTGAATGGTCTGCTGGTGTCTGGCATAGAA < 41bp 1 0.476309479541729 1 0.203716516494751 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32680487 chr1:32680480 nonsynonymous SNV 0.862 1 28 hm5C_associated_SNPs_46281 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32680460-32680499
64251 chr17 73489156 73489156 1 + A G UCEC 73489149 + 73489129 73489169 41 CGGCGGCCTCCCCTCAGCCACATGATCAGCCTCTTCATTAA CGGCGGCCTCCCCTCAGCCACATGATCGGCCTCTTCATTAA < 41bp 1 0.520349492789163 1 0.0825403332710266 experiment 0.959301014421674 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73489149 chr17:73489156 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_46282 0 0 1 GRWD1 POSTAR2 ENCODE chr17:73489152-73489217
64251 chr4 1206071 1206071 1 - A C UCEC 1206086 - 1206066 1206106 41 CCACCCGCCCCACGCCCCTTCTCCTGGCCAAACCGTCAAGC CCACCCGCCCCACGCCCCTTCTCCTGGCCAAACCGGCAAGC < 41bp 1 0.524087675408778 1 0.653192281723022 experiment 0.951824649182443 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206086 chr4:1206071 nonsynonymous SNV 0.000 1 36 hm5C_associated_SNPs_46283 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:1206030-1206095
64251 chr1 153617540 153617540 1 + G A UCEC 153617536 + 153617516 153617556 41 TTTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGT TTTTTTTTTTCCCCTTTGGGCCAGATCGGGGTATGATAGGT < 41bp 1 0.18796894792723 1 0.395487934350967 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617536 chr1:153617540 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_46284 0 0 30 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr1 153617540 153617540 1 + G A UCEC 153617537 + 153617517 153617557 41 TTTTTTTTTCCCCTTTGGGCCAGGTCGGGGTATGATAGGTC TTTTTTTTTCCCCTTTGGGCCAGATCGGGGTATGATAGGTC < 41bp 1 0.0695031785581197 1 0.304279327392578 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617537 chr1:153617540 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_46285 0 0 30 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:153617506-153617546
64251 chr7 99751517 99751517 1 + T C UCEC 99751531 + 99751511 99751551 41 TGCTGGTGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG TGCTGGCGACGGTGTCAGGACAGAGGGTGTTTGTGGTGAAG < 41bp 1 0.683379408544662 1 0.603875517845154 experiment 0.633241182910675 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LAMTOR4 ENSG00000188186 CDS Human protein_coding chr7:99751531 chr7:99751517 nonsynonymous SNV 1.000 1 7 hm5C_associated_SNPs_46286 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:99751494-99751532
64251 chr12 123463643 123463643 1 + T C UCEC 123463637 + 123463617 123463657 41 GTGCCATCTGCAGGCACCCACAGCCCTGACGGAGCCCCTGG GTGCCATCTGCAGGCACCCACAGCCCCGACGGAGCCCCTGG < 41bp 1 0.676208928670335 1 0.795725345611572 experiment 0.647582142659329 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463637 chr12:123463643 nonsynonymous SNV 0.032 1 27 hm5C_associated_SNPs_46287 0 0 5 BUD13 POSTAR2 ENCODE chr12:123463612-123463716
64251 chr20 30753177 30753177 1 + C T UCEC 30753183 + 30753163 30753203 41 CTTCTGGCTGCTAACGGGTACCATCGGCTTCTATGCAGCCT CTTCTGGCTGCTAATGGGTACCATCGGCTTCTATGCAGCCT < 41bp 1 0.0379754907994016 1 0.139955192804337 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TM9SF4 ENSG00000101337 CDS Human protein_coding chr20:30753183 chr20:30753177 nonsynonymous SNV 0.998 4 15 hm5C_associated_SNPs_46288 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:30753150-30753180
64251 chr17 35872394 35872394 1 + G A UCEC 35872403 + 35872383 35872423 41 CAGAGGTCACAGCACGCTACCAAGGACTCTCATGGCCCCTC CAGAGGTCACAACACGCTACCAAGGACTCTCATGGCCCCTC < 41bp 1 0.762626564356649 1 0.746462345123291 experiment 0.474746871286703 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DUSP14 ENSG00000161326 CDS Human other chr17:35872403 chr17:35872394 nonsynonymous SNV 1.000 1 12 hm5C_associated_SNPs_46289 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:35872380-35872400
64251 chr16 74339547 74339547 1 + A C UCEC 74339544 + 74339524 74339564 41 GGGCAGGAGAAAGAAGAGAGCAAAAAGGATAGGAAAGAGGA GGGCAGGAGAAAGAAGAGAGCAACAAGGATAGGAAAGAGGA < 41bp 1 0.660210750844336 1 0.529877424240112 experiment 0.679578498311327 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339544 chr16:74339547 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_46292 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:74339540-74339560
64251 chr16 74339547 74339547 1 + A C UCEC 74339565 + 74339545 74339585 41 AAAAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAA AACAAGGATAGGAAAGAGGACAAGGAGAAAGATAAAGATAA < 41bp 1 0.557006397709534 1 0.376390337944031 experiment 0.885987204580932 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339565 chr16:74339547 nonsynonymous SNV 1.000 1 3 hm5C_associated_SNPs_46293 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:74339540-74339560
64251 chr10 70719812 70719812 1 + A C UCEC 70719806 + 70719786 70719826 41 GAAAGTGGTTTCTTCTAAAACCAAAAAAGTGACAAAAAATG GAAAGTGGTTTCTTCTAAAACCAAAACAGTGACAAAAAATG < 41bp 1 0.32102569393629 1 0.150099992752075 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX21 ENSG00000165732 CDS Human protein_coding chr10:70719806 chr10:70719812 nonsynonymous SNV 0.950 1 27 hm5C_associated_SNPs_46294 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:70719792-70719813
64251 chr2 120005503 120005503 1 + C A UCEC 120005510 + 120005490 120005530 41 GCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGTGGTCAAC GCCAGAACAAGTTATTCAAGCTGCCCGTGTCCGTGGTCAAC < 41bp 1 0.275304590328588 1 0.0148885548114777 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005510 chr2:120005503 nonsynonymous SNV 0.998 1 14 hm5C_associated_SNPs_46298 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:120005490-120005530
64251 chr9 15453183 15453183 1 + C A UCEC 15453178 + 15453158 15453198 41 GTCATCAGGGAGACTGTGAACATGTCATTGTCATTACTGAC GTCATCAGGGAGACTGTGAACATGTAATTGTCATTACTGAC < 41bp 1 0.362454474034898 1 0.0754299163818359 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15453178 chr9:15453183 synonymous SNV . 0 26 hm5C_associated_SNPs_46299 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:15453149-15453185
64251 chr5 71491717 71491717 1 + T G UCEC 71491699 + 71491679 71491719 41 CCTGAGGATCTAACCAAGGACTTTGAAGAGTTAAAGGCTGA CCTGAGGATCTAACCAAGGACTTTGAAGAGTTAAAGGCGGA < 41bp 1 0.0561887141979868 1 0.131347626447678 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491699 chr5:71491717 synonymous SNV . 0 39 hm5C_associated_SNPs_46302 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:71491670-71491719
64251 chr1 162470026 162470026 1 + G T UCEC 162470019 + 162469999 162470039 41 CTCATTGACTTTGGACTTAGCTTCAAAGAAGGCAATCAGGT CTCATTGACTTTGGACTTAGCTTCAAATAAGGCAATCAGGT < 41bp 1 0.364904837395018 1 0.184536665678024 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162470019 chr1:162470026 stopgain 1.000 1 28 hm5C_associated_SNPs_46303 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:162469904-162470036
64251 chr17 28788917 28788917 1 + T G UCEC 28788910 + 28788890 28788930 41 TTCAGGTTCACAAGGGAGTTCATGGATTTGTTAAAGATAAG TTCAGGTTCACAAGGGAGTTCATGGATGTGTTAAAGATAAG < 41bp 1 0.147231526112709 1 0.180398404598236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CPD ENSG00000108582 CDS Human protein_coding chr17:28788910 chr17:28788917 nonsynonymous SNV 0.997 0 28 hm5C_associated_SNPs_46304 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:28788894-28788925
64251 chr10 102763510 102763510 1 + G A UCEC 102763493 + 102763473 102763513 41 TGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCGACT TGGCTGGGCCAGTGGCTGCCCATCAGGGACGCTATCCAACT < 41bp 1 0.44268484996051 1 0.255397140979767 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control LZTS2 ENSG00000107816 CDS Human protein_coding chr10:102763493 chr10:102763510 nonsynonymous SNV 0.799 4 38 hm5C_associated_SNPs_46305 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr10:102763503-102763530
64251 chr18 77728123 77728123 1 + G T UCEC 77728106 + 77728086 77728126 41 TACTGGAAGAAATGGGAAATCGCATTGAGGACTTACAGAAG TACTGGAAGAAATGGGAAATCGCATTGAGGACTTACATAAG < 41bp 1 0.621547597730002 1 0.521802663803101 experiment 0.756904804539997 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HSBP1L1 ENSG00000226742 CDS Human protein_coding chr18:77728106 chr18:77728123 nonsynonymous SNV 0.975 3 38 hm5C_associated_SNPs_46306 0 0 1 GRWD1 POSTAR2 ENCODE chr18:77728098-77728161
64251 chr2 75882236 75882236 1 + G A UCEC 75882235 + 75882215 75882255 41 CCTGGTCTAAACGCTGGGAACGTCCAAATTTTAATATTAAA CCTGGTCTAAACGCTGGGAACATCCAAATTTTAATATTAAA < 41bp 1 0.0625109626183063 1 0.176600992679596 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL19 ENSG00000115364 CDS Human protein_coding chr2:75882235 chr2:75882236 nonsynonymous SNV 0.982 2 22 hm5C_associated_SNPs_46307 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:75882220-75882240
64251 chr5 154179522 154179522 1 + T C UCEC 154179534 + 154179514 154179554 41 AGGGCCTGTCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC AGGGCCTGCCTGCCAGCCTGCCTGACCTGGATTCTGAGAAC < 41bp 1 0.24282547671622 1 0.046968400478363 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179534 chr5:154179522 nonsynonymous SNV 0.998 4 9 hm5C_associated_SNPs_46309 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:154179503-154179524
64251 chr19 1084254 1084254 1 + G A UCEC 1084244 + 1084224 1084264 41 TCTGCACTTGCAGGACGAGTCATCCAACCAGCGAGCTGAGG TCTGCACTTGCAGGACGAGTCATCCAACCAACGAGCTGAGG < 41bp 1 0.0902420953327887 1 0.0530829131603241 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1084244 chr19:1084254 synonymous SNV . 0 31 hm5C_associated_SNPs_46310 0 0 2 EIF3H POSTAR2 ENCODE chr19:1084248-1084297
64251 chr15 74917251 74917251 1 + C A UCEC 74917240 + 74917220 74917260 41 TCTGTTTCCTTCCCGGGTACCAGAGGGAAGTCTCAGGTTGC TCTGTTTCCTTCCCGGGTACCAGAGGGAAGTATCAGGTTGC < 41bp 1 0.338889374695912 1 0.777703642845154 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CLK3 ENSG00000179335 CDS Human protein_coding chr15:74917240 chr15:74917251 nonsynonymous SNV 0.999 1 32 hm5C_associated_SNPs_46312 0 0 10 BUD13 POSTAR2 ENCODE chr15:74917177-74917264
64251 chr6 33243786 33243786 1 + G T UCEC 33243772 + 33243752 33243792 41 TGATCACCATTATGCAGAATCCACGCCAGTACAAGATCCCA TGATCACCATTATGCAGAATCCACGCCAGTACAATATCCCA < 41bp 1 0.234185417939206 1 0.0510599911212921 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243772 chr6:33243786 nonsynonymous SNV 1.000 1 35 hm5C_associated_SNPs_46313 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr6 33243786 33243786 1 + G T UCEC 33243783 + 33243763 33243803 41 ATGCAGAATCCACGCCAGTACAAGATCCCAGACTGGTTCTT ATGCAGAATCCACGCCAGTACAATATCCCAGACTGGTTCTT < 41bp 1 0.461490414269459 1 0.0322167277336121 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPS18 ENSG00000231500 CDS Human protein_coding chr6:33243783 chr6:33243786 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_46314 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33243739-33243793
64251 chr13 99042340 99042340 1 + G A UCEC 99042342 + 99042322 99042362 41 AAACCAAAGCCCAAGCCCGTCCTCTTTAGCCGGGGGTCATC AAACCAAAGCCCAAGCCCATCCTCTTTAGCCGGGGGTCATC < 41bp 1 0.042148829160997 1 0.0225205719470978 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control FARP1 ENSG00000152767 CDS Human protein_coding chr13:99042342 chr13:99042340 nonsynonymous SNV 0.994 4 19 hm5C_associated_SNPs_46315 0 0 2 GRWD1 POSTAR2 ENCODE chr13:99042325-99042360
64251 chr7 139094358 139094358 1 + G A UCEC 139094341 + 139094321 139094361 41 GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACGAAG GAGAAGCAGGAGAAAAGAAACCAGGAACGGCTGAAACAAAG < 41bp 1 0.48694811053125 1 0.475083231925964 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094341 chr7:139094358 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_46316 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094358 139094358 1 + G A UCEC 139094348 + 139094328 139094368 41 AGGAGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAG AGGAGAAAAGAAACCAGGAACGGCTGAAACAAAGAGAAGAG < 41bp 1 0.572533591055492 1 0.333676993846893 experiment 0.854932817889016 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094348 chr7:139094358 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_46317 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094358 139094358 1 + G A UCEC 139094351 + 139094331 139094371 41 AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGA AGAAAAGAAACCAGGAACGGCTGAAACAAAGAGAAGAGAGA < 41bp 1 0.477984449641255 1 0.461202383041382 experiment 1 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094351 chr7:139094358 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_46318 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr7 139094358 139094358 1 + G A UCEC 139094357 + 139094337 139094377 41 GAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGAGAGAGA GAAACCAGGAACGGCTGAAACAAAGAGAAGAGAGAGAGAGA < 41bp 1 0.585331996954864 1 0.790554523468018 experiment 0.829336006090272 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139094357 chr7:139094358 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_46319 0 0 17 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:139094300-139094360
64251 chr12 109629526 109629526 1 + C T UCEC 109629531 + 109629511 109629551 41 CCAGAACAACGACATCGACACCGGGTGGTTGGACTACCTCA CCAGAACAACGACATTGACACCGGGTGGTTGGACTACCTCA < 41bp 1 0.315667984613672 1 0.564565300941467 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109629531 chr12:109629526 synonymous SNV . 0 16 hm5C_associated_SNPs_46321 0 0 3 GRWD1 POSTAR2 ENCODE chr12:109629469-109629568
64251 chr2 203157506 203157506 1 + G T UCEC 203157511 + 203157491 203157531 41 TTATACTAGGTGATTGAAATCTCTGAATATCGAACCCAGCT TTATACTAGGTGATTTAAATCTCTGAATATCGAACCCAGCT < 41bp 1 0.488239110448174 1 0.474218815565109 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NOP58 ENSG00000055044 CDS Human protein_coding chr2:203157511 chr2:203157506 stopgain 0.995 1 16 hm5C_associated_SNPs_46322 0 0 16 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:203157475-203157506
64251 chrX 107838787 107838787 1 + G A UCEC 107838784 + 107838764 107838804 41 CTGCATTGGAACTGGTATTTCAGGGCCTCCAGGTCAACCTG CTGCATTGGAACTGGTATTTCAGAGCCTCCAGGTCAACCTG < 41bp 1 0.641146317333832 1 0.550340473651886 experiment 0.717707365332335 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133672;RNA-BisSeq;T24;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|28418038;GSE74771;RNA-BisSeq;293T;Control COL4A5 ENSG00000188153 CDS Human protein_coding chrX:107838784 chrX:107838787 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_46323 1 0 3 EIF3D POSTAR2 ENCODE chrX:107838760-107838820
64251 chr13 52293459 52293459 1 + A G UCEC 52293456 + 52293436 52293476 41 GGCAGCGCCTGGGAGGTTATCGGACCAGTGCTGTGGCCTCA GGCAGCGCCTGGGAGGTTATCGGGCCAGTGCTGTGGCCTCA < 41bp 1 0.760361646898475 1 0.979871034622192 experiment 0.479276706203049 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52293456 chr13:52293459 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_46325 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:52293456-52293486
64251 chr11 32118703 32118703 1 + C T UCEC 32118684 + 32118664 32118704 41 TCTTTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATCG TCTTTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATTG < 41bp 1 0.546146194933908 1 0.266208708286285 experiment 0.907707610132184 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCN1 ENSG00000049449 CDS Human protein_coding chr11:32118684 chr11:32118703 stopgain 0.996 1 40 hm5C_associated_SNPs_46326 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:32118687-32118711
64251 chr11 32118703 32118703 1 + C T UCEC 32118687 + 32118667 32118707 41 TTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATCGAAT TTTTTTTTTTTTTTGTACTGCAGGAAGATTGTTGATTGAAT < 41bp 1 0.501856235874518 1 0.485311090946198 experiment 0.996287528250964 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RCN1 ENSG00000049449 CDS Human protein_coding chr11:32118687 chr11:32118703 stopgain 0.996 1 37 hm5C_associated_SNPs_46327 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:32118687-32118711
64251 chr17 65909003 65909003 1 + C T UCEC 65909010 + 65908990 65909030 41 TCCCTGACCACCACGGGAGGCACACTGGTTACATCTATGAC TCCCTGACCACCATGGGAGGCACACTGGTTACATCTATGAC < 41bp 1 0.14339445006575 1 0.0494157075881958 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BPTF ENSG00000171634 CDS Human protein_coding chr17:65909010 chr17:65909003 nonsynonymous SNV 0.428 2 14 hm5C_associated_SNPs_46329 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:65908987-65909013
64251 chr10 12191667 12191667 1 + A C UCEC 12191687 + 12191667 12191707 41 AATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT CATCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTAT < 41bp 1 0.510811821153781 1 0.0423297584056854 experiment 0.978376357692439 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191687 chr10:12191667 nonsynonymous SNV 1.000 1 1 hm5C_associated_SNPs_46330 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:12191643-12191667
64251 chrX 70517769 70517769 1 + A G UCEC 70517781 + 70517761 70517801 41 AGGATTCAAGGGAACCTTCCCTGATGCGGTATATCTCCCAT AGGATTCAGGGGAACCTTCCCTGATGCGGTATATCTCCCAT < 41bp 1 0.677375181065156 1 0.257016718387604 experiment 0.645249637869688 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NONO ENSG00000147140 CDS Human protein_coding chrX:70517781 chrX:70517769 nonsynonymous SNV 1.000 1 9 hm5C_associated_SNPs_46332 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70517715-70517783
64251 chr1 183096387 183096387 1 + C T UCEC 183096385 + 183096365 183096405 41 TGACTGTCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAG TGACTGTCATCCTGAGGGATCTTTTTCACTTCAGTGCAAAG < 41bp 1 0.0136831719000148 1 0.0213032364845276 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183096385 chr1:183096387 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_46333 0 0 1 SND1 POSTAR2 ENCODE chr1:183096363-183096391
64251 chr1 183096387 183096387 1 + C T UCEC 183096391 + 183096371 183096411 41 TCATCCTGAGGGATCTCTTTCACTTCAGTGCAAAGATGATG TCATCCTGAGGGATCTTTTTCACTTCAGTGCAAAGATGATG < 41bp 1 0.100472849179673 1 0.115063726902008 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control LAMC1 ENSG00000135862 CDS Human protein_coding chr1:183096391 chr1:183096387 nonsynonymous SNV 0.986 0 17 hm5C_associated_SNPs_46334 0 0 1 SND1 POSTAR2 ENCODE chr1:183096363-183096391
64251 chr7 6438343 6438343 1 + G A UCEC 6438341 + 6438321 6438361 41 CCTCCCGGGGCAAAGACAAGCCGATTGCCGTATGTAAAACT CCTCCCGGGGCAAAGACAAGCCAATTGCCGTATGTAAAACT < 41bp 1 0.070355152485587 1 0.114302515983582 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAC1 ENSG00000136238 CDS Human protein_coding chr7:6438341 chr7:6438343 synonymous SNV . 0 23 hm5C_associated_SNPs_46335 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:6438335-6438361
64251 chr7 6438343 6438343 1 + G A UCEC 6438342 + 6438322 6438362 41 CTCCCGGGGCAAAGACAAGCCGATTGCCGTATGTAAAACTT CTCCCGGGGCAAAGACAAGCCAATTGCCGTATGTAAAACTT < 41bp 1 0.150977789490783 1 0.212471276521683 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAC1 ENSG00000136238 CDS Human protein_coding chr7:6438342 chr7:6438343 synonymous SNV . 0 22 hm5C_associated_SNPs_46336 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:6438335-6438361
64251 chr7 6438343 6438343 1 + G A UCEC 6438348 + 6438328 6438368 41 GGGCAAAGACAAGCCGATTGCCGTATGTAAAACTTTCAGTC GGGCAAAGACAAGCCAATTGCCGTATGTAAAACTTTCAGTC < 41bp 1 0.360234308387322 1 0.278969466686249 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control RAC1 ENSG00000136238 CDS Human protein_coding chr7:6438348 chr7:6438343 synonymous SNV . 0 16 hm5C_associated_SNPs_46337 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:6438335-6438361
64251 chr12 56331286 56331286 1 + T C UCEC 56331284 + 56331264 56331304 41 AGCCTGGCACTGTTTCAATCCTTTGAGACTGGTCACTGCTT AGCCTGGCACTGTTTCAATCCTCTGAGACTGGTCACTGCTT < 41bp 1 0.37142093360437 1 0.332315623760223 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DGKA ENSG00000065357 CDS Human protein_coding chr12:56331284 chr12:56331286 nonsynonymous SNV 0.744 3 23 hm5C_associated_SNPs_46338 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:56331279-56331301
64251 chr15 64448304 64448304 1 - C T UCEC 64448294 - 64448274 64448314 41 ACAGACAGCCGGGATAAACCCCTGAAGGATGTGATCATCGC ACAGACAGCCAGGATAAACCCCTGAAGGATGTGATCATCGC < 41bp 1 0.614856342841668 1 0.222313791513443 experiment 0.770287314316663 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout PPIB ENSG00000166794 CDS Human protein_coding chr15:64448294 chr15:64448304 nonsynonymous SNV 0.991 2 11 hm5C_associated_SNPs_46339 1 0 22 TARDBP POSTAR2 DRA001158,DRS012387 chr15:64448232-64448310
64251 chr2 219526239 219526239 1 + G A UCEC 219526252 + 219526232 219526272 41 ACTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGGTGT ACTGACCAAAAGGTTTTCTTCAACATCCTGGAGGAAGGTGT < 41bp 1 0.760809809772778 1 0.253392457962036 experiment 0.478380380454444 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control BCS1L ENSG00000074582 CDS Human protein_coding chr2:219526252 chr2:219526239 nonsynonymous SNV 1.000 3 8 hm5C_associated_SNPs_46340 1 0 2 PPIG POSTAR2 ENCODE chr2:219526194-219526244
64251 chr17 72239541 72239541 1 + C A UCEC 72239546 + 72239526 72239566 41 CTCCTGCTCTTTATCCTGGACCTGGTCATCTGCCTCATTGC CTCCTGCTCTTTATCATGGACCTGGTCATCTGCCTCATTGC < 41bp 1 0.153656114889925 1 0.07244473695755 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control TTYH2 ENSG00000141540 CDS Human protein_coding chr17:72239546 chr17:72239541 nonsynonymous SNV 1.000 1 16 hm5C_associated_SNPs_46343 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:72239533-72239564
64251 chr20 60768508 60768508 1 + T C UCEC 60768502 + 60768482 60768522 41 ACCTGCAAGGTGTTTCTCAGCAAGATTGAGGACCGTGTTTC ACCTGCAAGGTGTTTCTCAGCAAGATCGAGGACCGTGTTTC < 41bp 1 0.778597212751448 1 0.350099444389343 experiment 0.442805574497104 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MTG2 ENSG00000101181 CDS Human protein_coding chr20:60768502 chr20:60768508 nonsynonymous SNV 0.000 0 27 hm5C_associated_SNPs_46344 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:60768499-60768535
64251 chr1 39898741 39898741 1 + C T UCEC 39898725 + 39898705 39898745 41 GTTTACTTTTCAAAGGCTTTCTCCATTGACATTATTCGACA GTTTACTTTTCAAAGGCTTTCTCCATTGACATTATTTGACA < 41bp 1 0.205380127011611 1 0.94687557220459 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39898725 chr1:39898741 stopgain 1.000 1 37 hm5C_associated_SNPs_46345 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:39898716-39898742
64251 chr1 63282296 63282296 1 + G T UCEC 63282293 + 63282273 63282313 41 CGGGATGTACAATAGAGGATCACGTAATTGCAGGAAATGTA CGGGATGTACAATAGAGGATCACTTAATTGCAGGAAATGTA < 41bp 1 0.141659403642883 1 0.102773934602737 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282293 chr1:63282296 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_46346 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr1 43162438 43162438 1 + A G UCEC 43162444 + 43162424 43162464 41 CGCAATTACCAGCAAAATTACCAGAATAGTGAGAGTGGGGA CGCAATTACCAGCAGAATTACCAGAATAGTGAGAGTGGGGA < 41bp 1 0.564265007731899 1 0.280603408813477 experiment 0.871469984536201 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162444 chr1:43162438 synonymous SNV . 0 15 hm5C_associated_SNPs_46347 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:43162384-43162444
64251 chr3 38180299 38180299 1 + C A UCEC 38180279 + 38180259 38180299 41 CTGCTCTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTC CTGCTCTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTA < 41bp 1 0.612098460493455 1 0.388268053531647 experiment 0.775803079013089 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180279 chr3:38180299 nonsynonymous SNV 0.933 2 41 hm5C_associated_SNPs_46348 0 0 4 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr3 38180299 38180299 1 + C A UCEC 38180284 + 38180264 38180304 41 CTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTCTTGAA CTCAACATGCGAGTGCGGCGCCGCCTGTCTCTGTTATTGAA < 41bp 1 0.130958552271787 1 0.262481808662415 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180284 chr3:38180299 nonsynonymous SNV 0.933 2 36 hm5C_associated_SNPs_46349 0 0 4 DDX3X POSTAR2 ENCODE chr3:38180278-38180370
64251 chr2 207174862 207174862 1 + G A UCEC 207174847 + 207174827 207174867 41 TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCGAAGGG TTTGATGATGACTGTGAGACCAAAAAAGTTTCTTCAAAGGG < 41bp 1 0.448304902033874 1 0.214750707149506 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174847 chr2:207174862 synonymous SNV . 0 36 hm5C_associated_SNPs_46351 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207174770-207174869
64251 chr3 180693112 180693112 1 + G T UCEC 180693102 + 180693082 180693122 41 TTTTTCTCATCTTTAACAGTCACAGTTGCAGATTATATTTC TTTTTCTCATCTTTAACAGTCACAGTTGCATATTATATTTC < 41bp 1 0.217435044962354 1 0.116591483354568 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control FXR1 ENSG00000114416 CDS Human protein_coding chr3:180693102 chr3:180693112 nonsynonymous SNV 1.000 4 31 hm5C_associated_SNPs_46352 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr3:180693100-180693125
64251 chr20 18455766 18455766 1 + G T UCEC 18455764 + 18455744 18455784 41 TAAAAGTAATTTGCCATTAACAGAAATCAACAAAATTCTGA TAAAAGTAATTTGCCATTAACATAAATCAACAAAATTCTGA < 41bp 1 0.265355955786124 1 0.0934963226318359 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient POLR3F ENSG00000132664 CDS Human protein_coding chr20:18455764 chr20:18455766 stopgain 1.000 1 23 hm5C_associated_SNPs_46353 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:18455756-18455786
64251 chr5 14359513 14359513 1 + A G UCEC 14359530 + 14359510 14359550 41 TCAACCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG TCAGCCACATTGAGACGGTGCTGCAGCAGCTGGACGAGGCG < 41bp 1 0.362794715459615 1 0.524350523948669 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TRIO ENSG00000038382 CDS Human protein_coding chr5:14359530 chr5:14359513 nonsynonymous SNV 0.943 0 4 hm5C_associated_SNPs_46356 0 0 2 EIF3H POSTAR2 ENCODE chr5:14359500-14359567
64251 chr20 62366069 62366069 1 + A T UCEC 62366054 + 62366034 62366074 41 TGCCCTCTGTCCGTCTCTTGCAGTGGTGGGGTCAGATGCTG TGCCCTCTGTCCGTCTCTTGCAGTGGTGGGGTCAGTTGCTG < 41bp 1 0.471229552319575 1 0.436184406280518 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZGPAT ENSG00000197114;ENSG00000273154 CDS Human other chr20:62366054 chr20:62366069 nonsynonymous SNV 0.000 0 36 hm5C_associated_SNPs_46357 0 0 9 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:62366059-62366090
64251 chr2 63834052 63834052 1 + G T UCEC 63834066 + 63834046 63834086 41 TGAGAAGATGGATCTTACTGCAAAGGAACTGACAGAAGAAA TGAGAATATGGATCTTACTGCAAAGGAACTGACAGAAGAAA < 41bp 1 0.288603837598851 1 0.122125118970871 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834066 chr2:63834052 nonsynonymous SNV 1.000 4 7 hm5C_associated_SNPs_46358 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63834000-63834060
64251 chr19 50027855 50027855 1 + G A UCEC 50027862 + 50027842 50027882 41 ACCCTCCGGAGCTGCAACTTCGGTTCCTGCGGAATGGGCTG ACCCTCCGGAGCTACAACTTCGGTTCCTGCGGAATGGGCTG < 41bp 1 0.433478842450071 1 0.428003072738647 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027862 chr19:50027855 synonymous SNV . 0 14 hm5C_associated_SNPs_46360 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50027819-50027859
64251 chr11 47296642 47296642 1 + G A UCEC 47296654 + 47296634 47296674 41 ACTCTCAAGCGCCTGGTGGACTGCTGTAGTGAGCGCCTTCT ACTCTCAAACGCCTGGTGGACTGCTGTAGTGAGCGCCTTCT < 41bp 1 0.468642303015696 1 0.113828539848328 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47296654 chr11:47296642 synonymous SNV . 0 9 hm5C_associated_SNPs_46361 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:47296618-47296644
64251 chr2 220097300 220097300 1 + T C UCEC 220097293 + 220097273 220097313 41 GACACTGGATCGGGAGAGGGCTACATTTGAGAAGTTGAGCC GACACTGGATCGGGAGAGGGCTACATTCGAGAAGTTGAGCC < 41bp 1 0.784892599942253 1 0.822545349597931 experiment 0.430214800115494 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097293 chr2:220097300 synonymous SNV . 0 28 hm5C_associated_SNPs_46367 0 0 11 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr6 33179715 33179715 1 + G A UCEC 33179728 + 33179708 33179748 41 TTGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACACCAT TTGCCCAACCTGGAGGGCGTCAGTGAAAAGCAGTACACCAT < 41bp 1 0.536302547305005 1 0.200587064027786 experiment 0.927394905389989 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RING1 ENSG00000204227 CDS Human protein_coding chr6:33179728 chr6:33179715 nonsynonymous SNV 0.998 2 8 hm5C_associated_SNPs_46368 0 0 20 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:33179700-33179720
64251 chr5 134099691 134099691 1 + C T UCEC 134099676 + 134099656 134099696 41 CCTCAGACAAAAGAAGTAAACGTGGAGATGACAGACGGTCT CCTCAGACAAAAGAAGTAAACGTGGAGATGACAGATGGTCT < 41bp 1 0.691057080189127 1 0.618604600429535 experiment 0.617885839621746 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099676 chr5:134099691 nonsynonymous SNV 0.990 4 36 hm5C_associated_SNPs_46369 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr5 134099691 134099691 1 + C T UCEC 134099687 + 134099667 134099707 41 AGAAGTAAACGTGGAGATGACAGACGGTCTAGAAGTAGAGA AGAAGTAAACGTGGAGATGACAGATGGTCTAGAAGTAGAGA < 41bp 1 0.610664743080431 1 0.424669414758682 experiment 0.778670513839138 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control DDX46 ENSG00000145833 CDS Human protein_coding chr5:134099687 chr5:134099691 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_46370 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:134099672-134099724
64251 chr18 56063419 56063419 1 + C A UCEC 56063414 + 56063394 56063434 41 TGCAGCTTTAATCGCCTTGACTTACCTCCATATGAAACCTT TGCAGCTTTAATCGCCTTGACTTACATCCATATGAAACCTT < 41bp 1 0.0478821858691343 1 0.0756919384002686 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NEDD4L ENSG00000049759 CDS Human protein_coding chr18:56063414 chr18:56063419 nonsynonymous SNV 1.000 4 26 hm5C_associated_SNPs_46371 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:56063398-56063428
64251 chr19 50385608 50385608 1 + C G UCEC 50385593 + 50385573 50385613 41 GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGC GCAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCGCCCGC < 41bp 1 0.295655035518723 1 0.159971326589584 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385593 chr19:50385608 nonsynonymous SNV 0.228 0 36 hm5C_associated_SNPs_46373 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr19 50385608 50385608 1 + C G UCEC 50385594 + 50385574 50385614 41 CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCCCCCGCC CAGCCACAGCCTGAGGGAGCCGCCTCCGACCTTCGCCCGCC < 41bp 1 0.502239298923618 1 0.348650127649307 experiment 0.995521402152765 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385594 chr19:50385608 nonsynonymous SNV 0.228 0 35 hm5C_associated_SNPs_46374 0 0 1 PPIG POSTAR2 ENCODE chr19:50385593-50385648
64251 chr12 7362288 7362288 1 + C T UCEC 7362307 + 7362287 7362327 41 GCTGTGGAATAAGCTAGGCGCCACCCTGGCCAATGGAAACC GTTGTGGAATAAGCTAGGCGCCACCCTGGCCAATGGAAACC < 41bp 1 0.0830313491862423 1 0.0447022616863251 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PEX5 ENSG00000139197 CDS Human protein_coding chr12:7362307 chr12:7362288 synonymous SNV . 0 2 hm5C_associated_SNPs_46375 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7362284-7362316
64251 chr19 7589952 7589952 1 + A G UCEC 7589936 + 7589916 7589956 41 CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAAATAC CACCCCCAGAAGAGGAAGACCTTCGCCGTCGTCTCAGATAC < 41bp 1 0.351188675773873 1 0.0976506471633911 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589936 chr19:7589952 nonsynonymous SNV 0.997 1 37 hm5C_associated_SNPs_46378 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7589933-7589965
64251 chr5 65105419 65105419 1 + G A UCEC 65105431 + 65105411 65105451 41 GAAAATTGGGTGTGGGACGTCGATTCCCTCCGAAGATTGTC GAAAATTGAGTGTGGGACGTCGATTCCCTCCGAAGATTGTC < 41bp 1 0.0953848309287672 1 0.311452031135559 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NLN ENSG00000123213 CDS Human protein_coding chr5:65105431 chr5:65105419 stopgain 1.000 1 9 hm5C_associated_SNPs_46379 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:65105407-65105429
64251 chr9 21818058 21818058 1 + G A UCEC 21818055 + 21818035 21818075 41 CATGGAAGGCAGCACACCATCATGCCTTCAAAGGTCAACTA CATGGAAGGCAGCACACCATCATACCTTCAAAGGTCAACTA < 41bp 1 0.26048352441695 1 0.200212955474854 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MTAP ENSG00000099810;ENSG00000264545 CDS Human other chr9:21818055 chr9:21818058 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_46380 0 0 5 BUD13 POSTAR2 ENCODE chr9:21818025-21818075
64251 chr10 75520023 75520023 1 + G A UCEC 75520010 + 75519990 75520030 41 TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACC TGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAACCCAACC < 41bp 1 0.249519028230878 1 0.0877577364444733 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520010 chr10:75520023 synonymous SNV . 0 34 hm5C_associated_SNPs_46382 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:75519988-75520026
64251 chr7 43990226 43990226 1 + C T UCEC 43990229 + 43990209 43990249 41 ATCTGCTCGCTGCTCTGCGACCCCAACCCCGATGACCCCCT ATCTGCTCGCTGCTCTGTGACCCCAACCCCGATGACCCCCT < 41bp 1 0.646438743882431 1 0.0683695077896118 experiment 0.707122512235139 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control UBE2D4 ENSG00000078967 CDS Human protein_coding chr7:43990229 chr7:43990226 synonymous SNV . 0 18 hm5C_associated_SNPs_46383 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:43990205-43990239
64251 chr6 26022034 26022034 1 + G A UCEC 26022042 + 26022022 26022062 41 CCCGGCGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTAC CCCGGCGTGGCGATGTGAAGCGGATCTCTGGTCTGATCTAC < 41bp 1 0.760684402756934 1 0.80781078338623 experiment 0.478631194486132 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022042 chr6:26022034 nonsynonymous SNV 0.097 0 13 hm5C_associated_SNPs_46386 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr6 26022034 26022034 1 + G A UCEC 26022047 + 26022027 26022067 41 CGTGGCGGTGTGAAGCGGATCTCTGGTCTGATCTACGAGGA CGTGGCGATGTGAAGCGGATCTCTGGTCTGATCTACGAGGA < 41bp 1 0.699481565165494 1 0.295874774456024 experiment 0.601036869669013 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4A ENSG00000196176 CDS Human other chr6:26022047 chr6:26022034 nonsynonymous SNV 0.097 0 8 hm5C_associated_SNPs_46387 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr15 42052714 42052714 1 + T C UCEC 42052715 + 42052695 42052735 41 TCCAAGGTTTCCAAAAGTCTCATTCTTACTCGAGTAAGTGT TCCAAGGTTTCCAAAAGTCCCATTCTTACTCGAGTAAGTGT < 41bp 1 0.0160688485907783 1 0.0652045905590057 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MGA ENSG00000174197 CDS Human protein_coding chr15:42052715 chr15:42052714 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_46388 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003587 chr15:42052713-42052734
64251 chr4 39747374 39747374 1 + G T UCEC 39747383 + 39747363 39747403 41 TTTTTTTAGGAGGAAGATACCAACTAGAGATAAAAATACCA TTTTTTTAGGATGAAGATACCAACTAGAGATAAAAATACCA < 41bp 1 0.278775179882975 1 0.198065668344498 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control UBE2K ENSG00000078140 CDS Human protein_coding chr4:39747383 chr4:39747374 stopgain 0.997 1 12 hm5C_associated_SNPs_46390 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr4:39747358-39747379
64251 chr1 192778203 192778203 1 + T C UCEC 192778185 + 192778165 192778205 41 AGCCGCAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGC AGCCGCAAACAGCCGGGGCTCCAGCGGGAGAACGATAACGC < 41bp 1 0.488227446369918 1 0.688748300075531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RGS2 ENSG00000116741 CDS Human protein_coding chr1:192778185 chr1:192778203 nonsynonymous SNV 0.060 2 39 hm5C_associated_SNPs_46391 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:192778200-192778220
64251 chr1 164790817 164790817 1 + G A UCEC 164790815 + 164790795 164790835 41 ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAG ATCAGCCAGACAGGAGGATACAATGATGGACTCGCAGCCAG < 41bp 1 0.570744978522593 1 0.231753200292587 experiment 0.858510042954814 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790815 chr1:164790817 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_46392 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr21 30714962 30714962 1 + T C UCEC 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CCGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA < 41bp 1 0.292292219471641 1 0.109923601150513 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714962 synonymous SNV . 0 2 hm5C_associated_SNPs_46393 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:30714909-30714963
64251 chr15 40477814 40477814 1 + T C UCEC 40477830 + 40477810 40477850 41 CATATGTGGAAGAGACTGCACGACAGCCAGTTATGTGAGTG CATACGTGGAAGAGACTGCACGACAGCCAGTTATGTGAGTG < 41bp 1 0.738157932227761 1 0.234449476003647 experiment 0.523684135544478 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BUB1B ENSG00000156970 CDS Human protein_coding chr15:40477830 chr15:40477814 synonymous SNV . 0 5 hm5C_associated_SNPs_46398 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:40477786-40477824
64251 chr17 78318509 78318509 1 + A G UCEC 78318498 + 78318478 78318518 41 CGTACACGTGTACCCCAGTTCAGTTTTCTTGACATCTTCCC CGTACACGTGTACCCCAGTTCAGTTTTCTTGGCATCTTCCC < 41bp 1 0.0557352795724729 1 0.0243497490882874 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78318498 chr17:78318509 nonsynonymous SNV 0.883 2 32 hm5C_associated_SNPs_46400 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr17:78318508-78318532
64251 chr2 46609701 46609701 1 + C A UCEC 46609709 + 46609689 46609729 41 GCCACCCAGTACCAGGACTACAGCCTGTCGTCAGCCCACAA GCCACCCAGTACAAGGACTACAGCCTGTCGTCAGCCCACAA < 41bp 1 0.345723810705657 1 0.105517625808716 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPAS1 ENSG00000116016 CDS Human protein_coding chr2:46609709 chr2:46609701 nonsynonymous SNV 0.920 0 13 hm5C_associated_SNPs_46401 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831629 chr2:46609700-46609720
64251 chr7 132990726 132990726 1 + C A UCEC 132990708 + 132990688 132990728 41 CTTCGACTAGAGCTTCACAGCAAGAAGATGAACCTTCACTT CTTCGACTAGAGCTTCACAGCAAGAAGATGAACCTTCAATT < 41bp 1 0.727336815247781 1 0.650881111621857 experiment 0.545326369504437 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EXOC4 ENSG00000131558 CDS Human protein_coding chr7:132990708 chr7:132990726 nonsynonymous SNV 0.751 2 39 hm5C_associated_SNPs_46402 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:132990725-132990739
64251 chr19 14561740 14561740 1 + G T UCEC 14561750 + 14561730 14561770 41 CCAACCAGAAGCTGGGGCTGCTGCGGGAGGCTCTGGAGCGG CCAACCAGAATCTGGGGCTGCTGCGGGAGGCTCTGGAGCGG < 41bp 1 0.611134237424334 1 0.4442118704319 experiment 0.777731525151331 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561750 chr19:14561740 nonsynonymous SNV 0.996 2 11 hm5C_associated_SNPs_46403 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:14561720-14561740
64251 chr19 14561740 14561740 1 + G T UCEC 14561760 + 14561740 14561780 41 GCTGGGGCTGCTGCGGGAGGCTCTGGAGCGGAGACTTGGGG TCTGGGGCTGCTGCGGGAGGCTCTGGAGCGGAGACTTGGGG < 41bp 1 0.247538612798638 1 0.341204106807709 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control PKN1 ENSG00000123143 CDS Human protein_coding chr19:14561760 chr19:14561740 nonsynonymous SNV 0.996 2 1 hm5C_associated_SNPs_46404 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:14561720-14561740
64251 chr20 49458393 49458393 1 + C A UCEC 49458380 + 49458360 49458400 41 GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCCTGCGGAG GCTGAGCGGGACCATGGGGCCTTCCCTCAGGCCATGCGGAG < 41bp 1 0.251590184093057 1 0.0608116388320923 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49458380 chr20:49458393 nonsynonymous SNV 0.072 4 34 hm5C_associated_SNPs_46405 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49458378-49458400
64251 chr10 103919285 103919285 1 + C T UCEC 103919298 + 103919278 103919318 41 CCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT CCAGTGATGAGGAAGAGGAGCAAAAAAAACCCATGAAAAAT < 41bp 1 0.576814045768515 1 0.573019921779633 experiment 0.846371908462969 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919298 chr10:103919285 synonymous SNV . 0 8 hm5C_associated_SNPs_46406 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919229-103919298
64251 chr13 76414550 76414550 1 + C A UCEC 76414530 + 76414510 76414550 41 CTCTGATAACTGGTTAGCTTCCAGTTCCAACCATCAGTGCC CTCTGATAACTGGTTAGCTTCCAGTTCCAACCATCAGTGCA < 41bp 1 0.200425720936572 1 0.0582790672779083 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LMO7 ENSG00000136153 CDS Human protein_coding chr13:76414530 chr13:76414550 synonymous SNV . 0 41 hm5C_associated_SNPs_46407 0 0 3 BUD13 POSTAR2 ENCODE chr13:76414517-76414642
64251 chr2 131128288 131128288 1 + C T UCEC 131128284 + 131128264 131128304 41 TCTGTCTGCCCCAGATGATCCCACCTGACTTCAGTCTCTTT TCTGTCTGCCCCAGATGATCCCACTTGACTTCAGTCTCTTT < 41bp 1 0.0772402025805459 1 0.014413595199585 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131128284 chr2:131128288 nonsynonymous SNV 0.888 3 25 hm5C_associated_SNPs_46408 0 0 1 PPIG POSTAR2 ENCODE chr2:131128278-131128294
64251 chr6 26045907 26045907 1 + T C UCEC 26045888 + 26045868 26045908 41 AGGACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGTG AGGACTTCAAAACCGACCTGCGTTTCCAGAGCTCTGCGGCG < 41bp 1 0.0567193785316266 1 0.0631669759750366 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control HIST1H3C ENSG00000196532 CDS Human other chr6:26045888 chr6:26045907 nonsynonymous SNV 0.835 0 40 hm5C_associated_SNPs_46409 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163975 chr6:26045907-26045908
64251 chr7 157159212 157159212 1 + C A UCEC 157159209 + 157159189 157159229 41 TTTTTAGCTAAGAAACGGGACATCTATGACAAATATGGCAA TTTTTAGCTAAGAAACGGGACATATATGACAAATATGGCAA < 41bp 1 0.0256180917118543 1 0.0644552409648895 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157159209 chr7:157159212 synonymous SNV . 0 24 hm5C_associated_SNPs_46410 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:157159174-157159212
64251 chrX 47072471 47072471 1 + A G UCEC 47072491 + 47072471 47072511 41 ACAAGGTTGTGCAGGGGCACCGACAGCTTGACTCCTACAAG GCAAGGTTGTGCAGGGGCACCGACAGCTTGACTCCTACAAG < 41bp 1 0.706070508642646 1 0.26274237036705 experiment 0.587858982714707 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47072491 chrX:47072471 nonsynonymous SNV 0.997 2 1 hm5C_associated_SNPs_46412 0 0 16 FUS POSTAR2 DRA001158,DRS012384 chrX:47072410-47072473
64251 chr20 25205859 25205859 1 + C T UCEC 25205875 + 25205855 25205895 41 GAGACACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT GAGATACAGCCGCAGAGCAGCCCCTTCTCATGCATGGACCT < 41bp 1 0.172734212046486 1 0.0401925444602966 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25205875 chr20:25205859 nonsynonymous SNV 0.048 0 5 hm5C_associated_SNPs_46413 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:25205840-25205863
64251 chr10 103827275 103827275 1 + C T UCEC 103827278 + 103827258 103827298 41 CCGAGTTTGCCCAGCACCGCCGGCTTGATGCTCACCTCCCC CCGAGTTTGCCCAGCACTGCCGGCTTGATGCTCACCTCCCC < 41bp 1 0.638539083826338 1 0.651076316833496 experiment 0.722921832347324 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HPS6 ENSG00000166189 CDS Human protein_coding chr10:103827278 chr10:103827275 nonsynonymous SNV 0.826 4 18 hm5C_associated_SNPs_46414 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:103827260-103827280
64251 chr11 73021361 73021361 1 + C A UCEC 73021363 + 73021343 73021383 41 ATGGCCCGCCGCCTGCCCCGCACCAGTGCTCTGAAGTCCAG ATGGCCCGCCGCCTGCCCAGCACCAGTGCTCTGAAGTCCAG < 41bp 1 0.469941094662845 1 0.202037066221237 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73021363 chr11:73021361 nonsynonymous SNV 0.022 1 19 hm5C_associated_SNPs_46415 0 0 1 EIF3H POSTAR2 ENCODE chr11:73021353-73021375
64251 chr11 73021361 73021361 1 + C A UCEC 73021366 + 73021346 73021386 41 GCCCGCCGCCTGCCCCGCACCAGTGCTCTGAAGTCCAGCTC GCCCGCCGCCTGCCCAGCACCAGTGCTCTGAAGTCCAGCTC < 41bp 1 0.356164423223807 1 0.204144567251205 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ARHGEF17 ENSG00000110237 CDS Human protein_coding chr11:73021366 chr11:73021361 nonsynonymous SNV 0.022 1 16 hm5C_associated_SNPs_46416 0 0 1 EIF3H POSTAR2 ENCODE chr11:73021353-73021375
64251 chr14 100367320 100367320 1 + G A UCEC 100367316 + 100367296 100367336 41 TCTGTGACATTGAATACTCTCCACGTCATTGGAATAGGTTT TCTGTGACATTGAATACTCTCCACATCATTGGAATAGGTTT < 41bp 1 0.334756551661481 1 0.402884602546692 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control EML1 ENSG00000066629 CDS Human protein_coding chr14:100367316 chr14:100367320 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_46417 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:100367310-100367335
64251 chr1 39851548 39851548 1 + A G UCEC 39851531 + 39851511 39851551 41 GTGCTCATTGGTGAGCAGTACCTCAAGGATGAACTGAAGAA GTGCTCATTGGTGAGCAGTACCTCAAGGATGAACTGAGGAA < 41bp 1 0.0945213073082354 1 0.0775502920150757 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851531 chr1:39851548 nonsynonymous SNV 1.000 1 38 hm5C_associated_SNPs_46419 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:39851531-39851554
64251 chr1 39851548 39851548 1 + A G UCEC 39851532 + 39851512 39851552 41 TGCTCATTGGTGAGCAGTACCTCAAGGATGAACTGAAGAAG TGCTCATTGGTGAGCAGTACCTCAAGGATGAACTGAGGAAG < 41bp 1 0.368433866984285 1 0.119789183139801 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MACF1 ENSG00000127603 CDS Human protein_coding chr1:39851532 chr1:39851548 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_46420 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:39851531-39851554
64251 chr20 37150281 37150281 1 + T C UCEC 37150300 + 37150280 37150320 41 CTGTGTAGGATTTTTTGTAGCAAGAAGACTGGAGAAGAGAT CCGTGTAGGATTTTTTGTAGCAAGAAGACTGGAGAAGAGAT < 41bp 1 0.573096385204077 1 0.554952323436737 experiment 0.853807229591847 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37150300 chr20:37150281 nonsynonymous SNV 1.000 4 2 hm5C_associated_SNPs_46422 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:37150251-37150288
64251 chr7 158672548 158672548 1 + T C UCEC 158672551 + 158672531 158672571 41 AAAAGTAATTCATTCTCTGACAAAGGGGAAGAAAGACATAA AAAAGTAATTCATTCTCCGACAAAGGGGAAGAAAGACATAA < 41bp 1 0.18067978974394 1 0.362850606441498 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control WDR60 ENSG00000126870 CDS Human protein_coding chr7:158672551 chr7:158672548 synonymous SNV . 0 18 hm5C_associated_SNPs_46423 0 0 1 AARS POSTAR2 ENCODE chr7:158672506-158672565
64251 chr12 107254061 107254061 1 + A C UCEC 107254054 + 107254034 107254074 41 CTGTTTTTGCAGTGGATAGTCTGCTGAAATACACTGGCTAT CTGTTTTTGCAGTGGATAGTCTGCTGACATACACTGGCTAT < 41bp 1 0.64857512523946 1 0.538294196128845 experiment 0.702849749521079 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8B ENSG00000111785 CDS Human protein_coding chr12:107254054 chr12:107254061 nonsynonymous SNV 1.000 4 28 hm5C_associated_SNPs_46424 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:107254048-107254072
64251 chr3 52238026 52238026 1 + A C UCEC 52238023 + 52238003 52238043 41 TCTTCTTCAAGATAACTTGCCAAAATGTAAGTCTCATTGTT TCTTCTTCAAGATAACTTGCCAACATGTAAGTCTCATTGTT < 41bp 1 0.431540201601947 1 0.0776388049125671 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52238023 chr3:52238026 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_46425 0 0 1 UCHL5 POSTAR2 ENCODE chr3:52237984-52238029
64251 chr1 110170130 110170130 1 + A G UCEC 110170120 + 110170100 110170140 41 GACGTCAATGTGCTGATGGCCCTGATTATCAATGGCCCCAT GACGTCAATGTGCTGATGGCCCTGATTATCGATGGCCCCAT < 41bp 1 0.419182068286886 1 0.034393697977066 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170120 chr1:110170130 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_46426 0 0 1 PPIG POSTAR2 ENCODE chr1:110170086-110170135
64251 chr7 73635986 73635986 1 + T C UCEC 73636001 + 73635981 73636021 41 TGGAGTATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA TGGAGCATTACAACTGGGGGCGGTTCTCGAAGCCCCCAGAA < 41bp 1 0.192550896666495 1 0.22772005200386 experiment 1 Functional Loss 31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control LAT2 ENSG00000086730 CDS Human protein_coding chr7:73636001 chr7:73635986 nonsynonymous SNV 0.002 1 6 hm5C_associated_SNPs_46428 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73635986-73636009
64251 chr3 138341081 138341081 1 + T C UCEC 138341068 + 138341048 138341088 41 TGGATGTTCAAATTAGTGGGCAAAGAAACATTCTATGTTGG TGGATGTTCAAATTAGTGGGCAAAGAAACATTCCATGTTGG < 41bp 1 0.142992574387706 1 0.354736387729645 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control FAIM ENSG00000158234 CDS Human protein_coding chr3:138341068 chr3:138341081 nonsynonymous SNV 0.980 0 34 hm5C_associated_SNPs_46429 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr3:138341038-138341081
64251 chr6 35438049 35438049 1 + C T UCEC 35438048 + 35438028 35438068 41 TAAATAAGGCAGGAAAGTTCCCTTCCCTGCTCACACACAAC TAAATAAGGCAGGAAAGTTCCTTTCCCTGCTCACACACAAC < 41bp 1 0.0745630928438182 1 0.0991190373897552 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438048 chr6:35438049 nonsynonymous SNV 0.984 2 22 hm5C_associated_SNPs_46430 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:35438002-35438069
64251 chr14 89336481 89336481 1 + G A UCEC 89336501 + 89336481 89336521 41 GCATGCATTGGAAGCAACCACTTCTATTCTGATCAGCCAGA ACATGCATTGGAAGCAACCACTTCTATTCTGATCAGCCAGA < 41bp 1 0.253602960714976 1 0.0685049295425415 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TTC8 ENSG00000165533 CDS Human protein_coding chr14:89336501 chr14:89336481 nonsynonymous SNV 0.917 4 1 hm5C_associated_SNPs_46431 0 0 1 ZNF622 POSTAR2 ENCODE chr14:89336414-89336513
64251 chr2 101622471 101622471 1 + A G UCEC 101622453 + 101622433 101622473 41 CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATG CCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGGTG < 41bp 1 0.759794920215416 1 0.67027485370636 experiment 0.480410159569168 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622453 chr2:101622471 nonsynonymous SNV 1.000 2 39 hm5C_associated_SNPs_46446 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:101622418-101622474
64251 chr2 101622471 101622471 1 + A G UCEC 101622461 + 101622441 101622481 41 GTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCA GTGTGCGGCTGTCCAGAAAACGTAATGAGGGTGAAGATTCA < 41bp 1 0.681226246024427 1 0.366963148117065 experiment 0.637547507951146 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL31 ENSG00000071082 CDS Human protein_coding chr2:101622461 chr2:101622471 nonsynonymous SNV 1.000 2 31 hm5C_associated_SNPs_46447 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:101622418-101622474
64251 chr3 108353782 108353782 1 + A G UCEC 108353763 + 108353743 108353783 41 AAAGTTGCTGTGTTTATTTCCATAAAATTTGCTGGAAAAAG AAAGTTGCTGTGTTTATTTCCATAAAATTTGCTGGAAAAGG < 41bp 1 0.148575814870318 1 0.468699812889099 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108353763 chr3:108353782 nonsynonymous SNV 0.999 0 40 hm5C_associated_SNPs_46450 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:108353766-108353805
64251 chr14 71444579 71444579 1 + A G UCEC 71444573 + 71444553 71444593 41 CTTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAAC CTTCCCAAGGGGACAGACCACCTGGGGACACTGCAGAAAAC < 41bp 1 0.212363584105862 1 0.475776225328445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444573 chr14:71444579 nonsynonymous SNV 0.001 0 27 hm5C_associated_SNPs_46451 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:71444560-71444580
64251 chr14 71444579 71444579 1 + A G UCEC 71444574 + 71444554 71444594 41 TTCCCAAGGGGACAGACCACCTGGGAACACTGCAGAAAACA TTCCCAAGGGGACAGACCACCTGGGGACACTGCAGAAAACA < 41bp 1 0.597329454757089 1 0.803783178329468 experiment 0.805341090485822 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444574 chr14:71444579 nonsynonymous SNV 0.001 0 26 hm5C_associated_SNPs_46452 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:71444560-71444580
64251 chr3 66431203 66431203 1 - A G UCEC 66431223 - 66431203 66431243 41 TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCT TGGACTGTTACTCCAGGGGACAAGCCTTCCACCCCCAGCCC < 41bp 1 0.245036309684303 1 0.148802876472473 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431223 chr3:66431203 synonymous SNV . 0 41 hm5C_associated_SNPs_46453 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:66431194-66431217
64251 chr17 65722742 65722742 1 + A G UCEC 65722746 + 65722726 65722766 41 ACGTCGCAGTCCTAGGAAGTCCACTAGCAGCTTCTAAGGGT ACGTCGCAGTCCTAGGGAGTCCACTAGCAGCTTCTAAGGGT < 41bp 1 0.380100285954854 1 0.189320653676987 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722746 chr17:65722742 synonymous SNV . 0 17 hm5C_associated_SNPs_46454 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65722634-65722747
64251 chr14 59951313 59951313 1 + T C UCEC 59951294 + 59951274 59951314 41 CTAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTG CTAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGCG < 41bp 1 0.0570336173024592 1 0.296420753002167 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JKAMP ENSG00000050130 splicing Human protein_coding chr14:59951294 chr14:59951313 . 0.383 0 40 hm5C_associated_SNPs_46455 0 0 4 DDX3X POSTAR2 ENCODE chr14:59951273-59951316
64251 chr14 59951313 59951313 1 + T C UCEC 59951295 + 59951275 59951315 41 TAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGTGA TAGTGCTTCTCGAAAAAAACCTTCAGGCGGCCCATGGGCGA < 41bp 1 0.699639231810861 1 0.0975841283798218 experiment 0.600721536378277 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control JKAMP ENSG00000050130 splicing Human protein_coding chr14:59951295 chr14:59951313 . 0.383 0 39 hm5C_associated_SNPs_46456 0 0 4 DDX3X POSTAR2 ENCODE chr14:59951273-59951316
64251 chr1 93812070 93812070 1 + T G UCEC 93812080 + 93812060 93812100 41 CCTCCGTTCATTTTCTGCACCCTCTTCGCAAAGCACCCCCC CCTCCGTTCAGTTTCTGCACCCTCTTCGCAAAGCACCCCCC < 41bp 1 0.312485385146198 1 0.0147461891174316 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93812080 chr1:93812070 . . 0 11 hm5C_associated_SNPs_46457 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:93811901-93812088
64251 chr1 93812070 93812070 1 + T G UCEC 93812086 + 93812066 93812106 41 TTCATTTTCTGCACCCTCTTCGCAAAGCACCCCCCGGGATC TTCAGTTTCTGCACCCTCTTCGCAAAGCACCCCCCGGGATC < 41bp 1 0.664289043014928 1 0.722793996334076 experiment 0.671421913970144 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93812086 chr1:93812070 . . 0 5 hm5C_associated_SNPs_46458 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:93811901-93812088
64251 chr17 78346514 78346514 1 + C T UCS 78346494 + 78346474 78346514 41 CGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTTCCTCTC CGGATCCGCCTCTGCCTCGACAGAGCTGCAGATTTCCTCTT < 41bp 1 0.173944115596033 1 0.664247572422028 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control RNF213 ENSG00000173821 CDS Human protein_coding chr17:78346494 chr17:78346514 nonsynonymous SNV 0.010 0 41 hm5C_associated_SNPs_46459 0 0 4 DDX24 POSTAR2 ENCODE chr17:78346507-78346531
64251 chr2 70096956 70096956 1 + G A UCS 70096964 + 70096944 70096984 41 CAGCCATGTAGCGGATCTGTCAGTTTACAGCCTCGAAGGAG CAGCCATGTAGCAGATCTGTCAGTTTACAGCCTCGAAGGAG < 41bp 1 0.336672661886238 1 0.112870126962662 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70096964 chr2:70096956 nonsynonymous SNV 1.000 2 13 hm5C_associated_SNPs_46460 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70096897-70096980
64251 chr20 33764024 33764024 1 + A G UCS 33764041 + 33764021 33764061 41 TCTAGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG TCTGGAGCCCATGTCTTCTTCGAAGTGGCTGTGAATGGGAG < 41bp 1 0.711013091779659 1 0.829120755195618 experiment 0.577973816440683 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PROCR ENSG00000101000 CDS Human protein_coding chr20:33764041 chr20:33764024 nonsynonymous SNV 0.462 0 4 hm5C_associated_SNPs_46465 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33764015-33764051
64251 chr3 12531391 12531391 1 + A G UCS 12531390 + 12531370 12531410 41 CAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTC CAATCCCTTTTGGTCAGGACCGTGGTCCTCTGAAAGAATTC < 41bp 1 0.380000074910828 1 0.238172292709351 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12531390 chr3:12531391 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_46466 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12531391-12531477
64251 chr9 106874060 106874060 1 + A G UCS 106874053 + 106874033 106874073 41 CTTGCTGGTCAAATGATGGCCTGTAAAAATGATATAAGTAA CTTGCTGGTCAAATGATGGCCTGTAAAGATGATATAAGTAA < 41bp 1 0.431678480244045 1 0.254419028759003 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SMC2 ENSG00000136824 CDS Human protein_coding chr9:106874053 chr9:106874060 nonsynonymous SNV 1.000 1 28 hm5C_associated_SNPs_46467 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:106874044-106874065
64251 chr2 27449457 27449457 1 + G T UCS 27449451 + 27449431 27449471 41 CTCTGCCCTGGCCAGTAAGGCCACAGGTTATCCACTGGCTT CTCTGCCCTGGCCAGTAAGGCCACAGTTTATCCACTGGCTT < 41bp 1 0.179878684624033 1 0.103307127952576 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CAD ENSG00000084774 CDS Human protein_coding chr2:27449451 chr2:27449457 nonsynonymous SNV 0.997 4 27 hm5C_associated_SNPs_46469 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:27449440-27449460
64251 chrX 73044555 73044555 1 - G A UCS 73044553 - 73044533 73044573 41 GAGATCCAGACCGAAAGTCACTTAATTCAGCTTGCGAATGT GAGATCCAGACCGAAAGTTACTTAATTCAGCTTGCGAATGT < 41bp 1 0.143783248281228 1 0.0355349183082581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044553 chrX:73044555 . . 0 19 hm5C_associated_SNPs_46472 0 0 65 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chrX 73044555 73044555 1 - G A UCS 73044568 - 73044548 73044588 41 TGAAGTAATAGATGTGAGATCCAGACCGAAAGTCACTTAAT TGAAGTAATAGATGTGAGATCCAGACCGAAAGTTACTTAAT < 41bp 1 0.256653868657007 1 0.68556672334671 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control TSIX;XIST ENSG00000229807;ENSG00000270641 ncRNA_exonic Human other chrX:73044568 chrX:73044555 . . 0 34 hm5C_associated_SNPs_46473 0 0 65 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chrX:73042120-73045840
64251 chr9 33295250 33295250 1 + C T UCS 33295260 + 33295240 33295280 41 AGGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGAC AGGATGACCTTAATGAAAGACCAGCAAAATCTACCTGTGAC < 41bp 1 0.139913332679601 1 0.179816126823425 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295260 chr9:33295250 synonymous SNV . 0 11 hm5C_associated_SNPs_46474 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:33295237-33295264
64251 chr9 33295250 33295250 1 + C T UCS 33295261 + 33295241 33295281 41 GGATGACCTCAATGAAAGACCAGCAAAATCTACCTGTGACA GGATGACCTTAATGAAAGACCAGCAAAATCTACCTGTGACA < 41bp 1 0.651212715910579 1 0.116502195596695 experiment 0.697574568178843 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295261 chr9:33295250 synonymous SNV . 0 10 hm5C_associated_SNPs_46475 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:33295237-33295264
64251 chr16 89620289 89620289 1 + C T UCS 89620301 + 89620281 89620321 41 GCCCATCTCCTTCCCTGAGGCGCAGGAGGGCCTCATGGGCA GCCCATCTTCTTCCCTGAGGCGCAGGAGGGCCTCATGGGCA < 41bp 1 0.67613874393565 1 0.488814413547516 experiment 0.6477225121287 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SPG7 ENSG00000197912 CDS Human protein_coding chr16:89620301 chr16:89620289 nonsynonymous SNV 0.572 5 9 hm5C_associated_SNPs_46476 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:89620274-89620300
64251 chr14 77580149 77580149 1 + G A UCS 77580159 + 77580139 77580179 41 AGCTCTGCAGGGTGTGCCCTCTCTGGTGGCAGGTGGAAGTC AGCTCTGCAGAGTGTGCCCTCTCTGGTGGCAGGTGGAAGTC < 41bp 1 0.757918097876621 1 0.220416039228439 experiment 0.484163804246759 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control CIPC ENSG00000198894 CDS Human protein_coding chr14:77580159 chr14:77580149 nonsynonymous SNV 0.852 1 11 hm5C_associated_SNPs_46479 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:77580131-77580161
64251 chr2 207024682 207024682 1 + G A UCS 207024663 + 207024643 207024683 41 GCGCCCACAATTTGCGCGCTCTCTTTCTGCTGCTCCCCAGC GCGCCCACAATTTGCGCGCTCTCTTTCTGCTGCTCCCCAAC < 41bp 1 0.385742108004596 1 0.0206138789653778 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 splicing Human protein_coding chr2:207024663 chr2:207024682 . . 0 40 hm5C_associated_SNPs_46480 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr2 207024682 207024682 1 + G A UCS 207024687 + 207024667 207024707 41 TTCTGCTGCTCCCCAGCTCTCGGATACAGCCGACACCATGG TTCTGCTGCTCCCCAACTCTCGGATACAGCCGACACCATGG < 41bp 1 0.700119130333703 1 0.520067751407623 experiment 0.599761739332594 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 splicing Human protein_coding chr2:207024687 chr2:207024682 . . 0 16 hm5C_associated_SNPs_46481 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr2 207024682 207024682 1 + G A UCS 207024693 + 207024673 207024713 41 TGCTCCCCAGCTCTCGGATACAGCCGACACCATGGGTTTCG TGCTCCCCAACTCTCGGATACAGCCGACACCATGGGTTTCG < 41bp 1 0.51404510878087 1 0.173482865095139 experiment 0.971909782438261 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EEF1B2 ENSG00000114942 splicing Human protein_coding chr2:207024693 chr2:207024682 . . 0 10 hm5C_associated_SNPs_46482 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:207024620-207024688
64251 chr12 124102387 124102387 1 + T C UCS 124102395 + 124102375 124102415 41 CCCATGGAAGAGTCATACATCAATTTCCTTGCAATTAACCA CCCATGGAAGAGCCATACATCAATTTCCTTGCAATTAACCA < 41bp 1 0.157487373577913 1 0.151721030473709 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control DDX55 ENSG00000111364 CDS Human protein_coding chr12:124102395 chr12:124102387 nonsynonymous SNV 0.968 1 13 hm5C_associated_SNPs_46489 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:124102355-124102391
64251 chr1 151633298 151633298 1 + A C UCS 151633305 + 151633285 151633325 41 CGAGTAATTGGTGAGAGTGACATCATGCAGGAATTCCTATC CGAGTAATTGGTGCGAGTGACATCATGCAGGAATTCCTATC < 41bp 1 0.35516781789671 1 0.273854434490204 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control SNX27 ENSG00000143376 CDS Human protein_coding chr1:151633305 chr1:151633298 nonsynonymous SNV 1.000 4 14 hm5C_associated_SNPs_46490 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151633275-151633311
64251 chr11 94229989 94229989 1 + C A UCS 94229975 + 94229955 94229995 41 ACATGGACACCTTATTCCTACTGGTACTCAAAGTCTTTGGG ACATGGACACCTTATTCCTACTGGTACTCAAAGTATTTGGG < 41bp 1 0.525228171968258 1 0.0388925075531006 experiment 0.949543656063484 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ANKRD49 ENSG00000168876 CDS Human protein_coding chr11:94229975 chr11:94229989 nonsynonymous SNV 1.000 2 35 hm5C_associated_SNPs_46491 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:94229978-94230007
64251 chr12 12038927 12038927 1 + T C UCS 12038928 + 12038908 12038948 41 TACTACAAACTAAACATTATCAGGAAGGAGCCAGGACAAAG TACTACAAACTAAACATTACCAGGAAGGAGCCAGGACAAAG < 41bp 1 0.716847553602877 1 0.420215338468552 experiment 0.566304892794246 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ETV6 ENSG00000139083 CDS Human protein_coding chr12:12038928 chr12:12038927 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_46492 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:12038903-12038930
64251 chr1 95657239 95657239 1 + T C UCS 95657252 + 95657232 95657272 41 TTCCGTGTATGGAACAGAACCCTACATAAGGCTTGGAGTTT TTCCGTGCATGGAACAGAACCCTACATAAGGCTTGGAGTTT < 41bp 1 0.0317553084700644 1 0.177334427833557 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TMEM56 ENSG00000152078 CDS Human protein_coding chr1:95657252 chr1:95657239 nonsynonymous SNV 0.939 2 8 hm5C_associated_SNPs_46493 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr1:95657219-95657241
64251 chr11 209947 209947 1 + C A UCS 209927 + 209907 209947 41 GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCC GCTCCTTCCTTCCCAAGAGACTGAGCGGGCCATGGAGATCA < 41bp 1 0.574401931601423 1 0.152616828680038 experiment 0.851196136797153 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:209927 chr11:209947 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_46499 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209923-209949
64251 chr2 75882241 75882241 1 + A C UCS 75882235 + 75882215 75882255 41 CCTGGTCTAAACGCTGGGAACGTCCAAATTTTAATATTAAA CCTGGTCTAAACGCTGGGAACGTCCACATTTTAATATTAAA < 41bp 1 0.0672027887374371 1 0.134790271520615 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MRPL19 ENSG00000115364 CDS Human protein_coding chr2:75882235 chr2:75882241 nonsynonymous SNV 0.804 1 27 hm5C_associated_SNPs_46500 0 0 8 CSTF2 POSTAR2 GSE37401,GSM917676 chr2:75882223-75882246
64251 chr11 47297547 47297547 1 + C T UCS 47297563 + 47297543 47297583 41 CTATCGATTGCTGCGCTCCCCAGTACCCGTCTCTGGGCAGA CTATTGATTGCTGCGCTCCCCAGTACCCGTCTCTGGGCAGA < 41bp 1 0.51984815781281 1 0.567916750907898 experiment 0.960303684374379 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control MADD ENSG00000110514 CDS Human protein_coding chr11:47297563 chr11:47297547 stopgain 0.998 1 5 hm5C_associated_SNPs_46501 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47297515-47297548
64251 chr14 51057742 51057742 1 + A C UCS 51057723 + 51057703 51057743 41 TTTTTCATGGAGAGGTGGATCTGAGCGAGAGACCACAGGAA TTTTTCATGGAGAGGTGGATCTGAGCGAGAGACCACAGGCA < 41bp 1 0.641863658067006 1 0.179550170898438 experiment 0.716272683865989 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ATL1 ENSG00000198513 CDS Human protein_coding chr14:51057723 chr14:51057742 synonymous SNV . 0 40 hm5C_associated_SNPs_46502 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:51057740-51057760
64251 chr11 126279209 126279209 1 + A C UCS 126279193 + 126279173 126279213 41 GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCAATCCT GTTTCTGGAAACAGCCTCCCCTCATCTGGGATGTCACTCCT < 41bp 1 0.402263054846272 1 0.216026872396469 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126279193 chr11:126279209 nonsynonymous SNV 0.979 0 37 hm5C_associated_SNPs_46503 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:126279177-126279213
64251 chr22 42273340 42273340 1 + T G UCS 42273332 + 42273312 42273352 41 TCCTGTGCCTCTCCTTTAACCCCCTGACTTCCCTGCTGCAG TCCTGTGCCTCTCCTTTAACCCCCTGACGTCCCTGCTGCAG < 41bp 1 0.26482152096788 1 0.0382526218891144 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273332 chr22:42273340 synonymous SNV . 0 29 hm5C_associated_SNPs_46504 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:42273318-42273368
64251 chr11 12243276 12243276 1 + G A UCS 12243280 + 12243260 12243300 41 AAGAGCTGGAACCAGGGCACCCCTCCCCTGGAGCTGCTGGC AAGAGCTGGAACCAGGACACCCCTCCCCTGGAGCTGCTGGC < 41bp 1 0.0428645982407382 1 0.123917520046234 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12243280 chr11:12243276 nonsynonymous SNV 0.905 4 17 hm5C_associated_SNPs_46507 0 0 1 FXR2 POSTAR2 ENCODE chr11:12243252-12243305
64251 chr19 11114067 11114067 1 + G T UCS 11114055 + 11114035 11114075 41 TCTGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGT TCTGATAGTGAAGAAAGTGGCTCAGAAGAAGATGAAGAGGT < 41bp 1 0.249374267177946 1 0.241566956043243 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control|30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114055 chr19:11114067 nonsynonymous SNV 1.000 1 33 hm5C_associated_SNPs_46508 0 0 8 FMR1 POSTAR2 ENCODE chr19:11114046-11114074
64251 chr19 11114067 11114067 1 + G T UCS 11114057 + 11114037 11114077 41 TGATAGTGAAGAAAGTGGCTCAGAAGAAGAGGAAGAGGTAA TGATAGTGAAGAAAGTGGCTCAGAAGAAGATGAAGAGGTAA < 41bp 1 0.308759633948511 1 0.37165692448616 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11114057 chr19:11114067 nonsynonymous SNV 1.000 1 31 hm5C_associated_SNPs_46509 0 0 8 FMR1 POSTAR2 ENCODE chr19:11114046-11114074
64251 chr21 17250147 17250147 1 + A G UCS 17250131 + 17250111 17250151 41 TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAATCTG TAAGAAATTAAATGAGCAAGCCGCAGAACTCTTCGAGTCTG < 41bp 1 0.550826315587796 1 0.466736823320389 experiment 0.898347368824407 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control USP25 ENSG00000155313 CDS Human protein_coding chr21:17250131 chr21:17250147 synonymous SNV . 0 37 hm5C_associated_SNPs_46510 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr21:17250107-17250152
64251 chr12 64173847 64173847 1 + C G UCS 64173833 + 64173813 64173853 41 TACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCCGGCCGG TACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCGGGCCGG < 41bp 1 0.41572330767896 1 0.145813256502151 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173833 chr12:64173847 nonsynonymous SNV 0.207 0 35 hm5C_associated_SNPs_46511 0 0 1 DDX3X POSTAR2 ENCODE chr12:64173807-64173911
64251 chr19 19627058 19627058 1 + C T UCS 19627040 + 19627020 19627060 41 GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTCAA GGGACCGGAAGTGTGGGATACTGCGAGTATGGCGGCGTTAA < 41bp 1 0.64040545354633 1 0.333201050758362 experiment 0.71918909290734 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19627040 chr19:19627058 nonsynonymous SNV 0.201 1 39 hm5C_associated_SNPs_46512 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr2 109104168 109104168 1 + C A UCS 109104161 + 109104141 109104181 41 TTTAAATGTTATAGGCAGAACAAGCTACTGTAACCTCTGAA TTTAAATGTTATAGGCAGAACAAGCTAATGTAACCTCTGAA < 41bp 1 0.189800229005264 1 0.374947816133499 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GCC2 ENSG00000135968 CDS Human protein_coding chr2:109104161 chr2:109104168 nonsynonymous SNV 0.949 0 28 hm5C_associated_SNPs_46513 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:109104160-109104187
64251 chr12 50834308 50834308 1 + C G UCS 50834317 + 50834297 50834337 41 TATATCACTTTCCAGTCAGACACAGATGCACAACAGGTAAG TATATCACTTTGCAGTCAGACACAGATGCACAACAGGTAAG < 41bp 1 0.579639544935193 1 0.425335198640823 experiment 0.840720910129614 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control LARP4 ENSG00000161813 CDS Human protein_coding chr12:50834317 chr12:50834308 nonsynonymous SNV 1.000 4 12 hm5C_associated_SNPs_46514 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:50834289-50834315
64251 chr7 99722494 99722494 1 + G A UCS 99722514 + 99722494 99722534 41 GACCGAGAAGATCTTTGACCCTTGCCTTTGAGCCCCCAGGA AACCGAGAAGATCTTTGACCCTTGCCTTTGAGCCCCCAGGA < 41bp 1 0.502662642504817 1 0.208709388971329 experiment 0.994674714990366 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99722514 chr7:99722494 nonsynonymous SNV 0.668 2 1 hm5C_associated_SNPs_46516 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99722491-99722515
64251 chr7 2395011 2395011 1 + C G UCS 2394994 + 2394974 2395014 41 CCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCCCTCCTT CCCCGGGCGCTGGAGAACGGCGACGCGGACGAGCCCTGCTT < 41bp 1 0.687415023354789 1 0.501115083694458 experiment 0.625169953290422 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394994 chr7:2395011 nonsynonymous SNV 0.982 3 38 hm5C_associated_SNPs_46517 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395011 2395011 1 + C G UCS 2395007 + 2394987 2395027 41 AGAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAG AGAACGGCGACGCGGACGAGCCCTGCTTCAGCGACCCCGAG < 41bp 1 0.226970684757546 1 0.0942867398262024 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395007 chr7:2395011 nonsynonymous SNV 0.982 3 25 hm5C_associated_SNPs_46518 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395011 2395011 1 + C G UCS 2395008 + 2394988 2395028 41 GAACGGCGACGCGGACGAGCCCTCCTTCAGCGACCCCGAGG GAACGGCGACGCGGACGAGCCCTGCTTCAGCGACCCCGAGG < 41bp 1 0.284404904785753 1 0.0989010334014893 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395008 chr7:2395011 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_46519 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395011 2395011 1 + C G UCS 2395015 + 2394995 2395035 41 GACGCGGACGAGCCCTCCTTCAGCGACCCCGAGGACTTCGT GACGCGGACGAGCCCTGCTTCAGCGACCCCGAGGACTTCGT < 41bp 1 0.674357585267084 1 0.834522187709808 experiment 0.651284829465831 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395015 chr7:2395011 nonsynonymous SNV 0.982 3 17 hm5C_associated_SNPs_46520 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr7 2395011 2395011 1 + C G UCS 2395021 + 2395001 2395041 41 GACGAGCCCTCCTTCAGCGACCCCGAGGACTTCGTGGACGA GACGAGCCCTGCTTCAGCGACCCCGAGGACTTCGTGGACGA < 41bp 1 0.479252965765266 1 0.105677157640457 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395021 chr7:2395011 nonsynonymous SNV 0.982 3 11 hm5C_associated_SNPs_46521 0 0 26 EIF3A POSTAR2 GSE65004,GSM1585664 chr7:2394980-2395020
64251 chr16 88780614 88780614 1 + C T UCS 88780612 + 88780592 88780632 41 AGGCTGCAGACCCAGTTCCCCTCCACTGTCAGCACTGTGTA AGGCTGCAGACCCAGTTCCCCTTCACTGTCAGCACTGTGTA < 41bp 1 0.40851999512867 1 0.224083065986633 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780612 chr16:88780614 nonsynonymous SNV 0.909 3 23 hm5C_associated_SNPs_46522 0 0 2 DDX55 POSTAR2 ENCODE chr16:88780607-88780636
64251 chr20 36488358 36488358 1 + C T UCS 36488378 + 36488358 36488398 41 CGGCGCCTGGATGCGGGGCTCTTTGTTCTCCAGCACATCTG TGGCGCCTGGATGCGGGGCTCTTTGTTCTCCAGCACATCTG < 41bp 1 0.39865341393621 1 0.044287383556366 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488378 chr20:36488358 nonsynonymous SNV 0.997 4 1 hm5C_associated_SNPs_46523 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:36488357-36488358
64251 chr20 35862430 35862430 1 + G T UCS 35862428 + 35862408 35862448 41 CTCCCCATCATTCAGTGGATCCGGATTGGTGCCAATGTCTC CTCCCCATCATTCAGTGGATCCTGATTGGTGCCAATGTCTC < 41bp 1 0.186632409214473 1 0.152963221073151 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862428 chr20:35862430 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_46524 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:35862416-35862439
64251 chr14 73637521 73637521 1 + G A UCS 73637529 + 73637509 73637549 41 ACAATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTT ACAATAGAGAACAGCAGGAGCACAACGACAGACGGAGCCTT < 41bp 1 0.580812006202589 1 0.280585050582886 experiment 0.838375987594822 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637529 chr14:73637521 nonsynonymous SNV 0.410 1 13 hm5C_associated_SNPs_46525 2 0 1 DDX24 POSTAR2 ENCODE chr14:73637506-73637566
64251 chr14 73637521 73637521 1 + G A UCS 73637531 + 73637511 73637551 41 AATAGAGAACGGCAGGAGCACAACGACAGACGGAGCCTTGG AATAGAGAACAGCAGGAGCACAACGACAGACGGAGCCTTGG < 41bp 1 0.604864981513837 1 0.266449153423309 experiment 0.790270036972326 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637531 chr14:73637521 nonsynonymous SNV 0.410 1 11 hm5C_associated_SNPs_46526 2 0 1 DDX24 POSTAR2 ENCODE chr14:73637506-73637566
64251 chr9 91083304 91083304 1 + G A UCS 91083287 + 91083267 91083307 41 TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCGATG TTTTTTTTTTTAATCCCCAGCGACATCTCGAATCAGCAATG < 41bp 1 0.339542331642261 1 0.493019551038742 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083287 chr9:91083304 nonsynonymous SNV 0.975 2 38 hm5C_associated_SNPs_46527 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:91083285-91083306
64251 chr18 8114820 8114820 1 + C T UCS 8114803 + 8114783 8114823 41 ACACAGGAAACCAAAATAGACTGTGTCCAAGTGGCCACAAA ACACAGGAAACCAAAATAGACTGTGTCCAAGTGGCCATAAA < 41bp 1 0.145571226295435 1 0.033341109752655 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PTPRM ENSG00000173482 CDS Human protein_coding chr18:8114803 chr18:8114820 nonsynonymous SNV 1.000 4 38 hm5C_associated_SNPs_46528 0 0 2 BUD13 POSTAR2 ENCODE chr18:8114781-8114823
64251 chr7 106826902 106826902 1 + C T UCS 106826904 + 106826884 106826924 41 TGGCCTTCAACTGTCTGGCACTGTTTTTTGAAAGGTAAAAC TGGCCTTCAACTGTCTGGTACTGTTTTTTGAAAGGTAAAAC < 41bp 1 0.101886319731135 1 0.0514753758907318 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HBP1 ENSG00000105856 CDS Human protein_coding chr7:106826904 chr7:106826902 nonsynonymous SNV 0.969 4 19 hm5C_associated_SNPs_46529 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:106826865-106826903
64251 chr11 214328 214328 1 + A G UCS 214325 + 214305 214345 41 TATGGAGCAGCAGCTCTCCTCGGACCCTGACTCGGACCCTG TATGGAGCAGCAGCTCTCCTCGGGCCCTGACTCGGACCCTG < 41bp 1 0.70515986841264 1 0.94624650478363 experiment 0.58968026317472 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control RIC8A ENSG00000177963 CDS Human protein_coding chr11:214325 chr11:214328 nonsynonymous SNV 0.987 2 24 hm5C_associated_SNPs_46530 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:214315-214349
64251 chr6 31594934 31594934 1 + C T UCS 31594939 + 31594919 31594959 41 CTACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCC CTACCCCCACCTCACTGGGGCCCCGCCGGGAACTGGGGCCC < 41bp 1 0.297622357432763 1 0.0890676975250244 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594939 chr6:31594934 nonsynonymous SNV 0.997 3 16 hm5C_associated_SNPs_46531 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594934 31594934 1 + C T UCS 31594940 + 31594920 31594960 41 TACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCC TACCCCCACCTCACTGGGGCCCCGCCGGGAACTGGGGCCCC < 41bp 1 0.273964310162999 1 0.12081977725029 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594940 chr6:31594934 nonsynonymous SNV 0.997 3 15 hm5C_associated_SNPs_46532 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594934 31594934 1 + C T UCS 31594941 + 31594921 31594961 41 ACCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCC ACCCCCACCTCACTGGGGCCCCGCCGGGAACTGGGGCCCCC < 41bp 1 0.327057123280343 1 0.142692536115646 experiment 1 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594941 chr6:31594934 nonsynonymous SNV 0.997 3 14 hm5C_associated_SNPs_46533 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr6 31594934 31594934 1 + C T UCS 31594942 + 31594922 31594962 41 CCCCCACCTCACCGGGGCCCCGCCGGGAACTGGGGCCCCCC CCCCCACCTCACTGGGGCCCCGCCGGGAACTGGGGCCCCCC < 41bp 1 0.5742496996521 1 0.470107853412628 experiment 0.8515006006958 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control|28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31594942 chr6:31594934 nonsynonymous SNV 0.997 3 13 hm5C_associated_SNPs_46534 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31594912-31594943
64251 chr14 102455116 102455116 1 + A G UCS 102455097 + 102455077 102455117 41 TGAGAGCTTGGACGCAGGTTCTTCTTGGACAAGCTGAAGAT TGAGAGCTTGGACGCAGGTTCTTCTTGGACAAGCTGAAGGT < 41bp 1 0.0659688823920122 1 0.124078840017319 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control DYNC1H1 ENSG00000197102 CDS Human protein_coding chr14:102455097 chr14:102455116 nonsynonymous SNV 1.000 3 40 hm5C_associated_SNPs_46535 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102455077-102455179
64251 chr1 6692465 6692465 1 + G A UCS 6692470 + 6692450 6692490 41 GGTCCTCCCTGAGGCGGGGGCCGGAGAGGACAGTCCTGGGA GGTCCTCCCTGAGGCAGGGGCCGGAGAGGACAGTCCTGGGA < 41bp 1 0.723988194348298 1 0.531862020492554 experiment 0.552023611303404 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692470 chr1:6692465 synonymous SNV . 0 16 hm5C_associated_SNPs_46536 0 0 1 SF3B1 POSTAR2 ENCODE chr1:6692444-6692474
64251 chr7 75933345 75933345 1 + C T UCS 75933337 + 75933317 75933357 41 GACCCCACCCAAGTTTCCTCCTCCCTGTCCCCTGAGGGCAC GACCCCACCCAAGTTTCCTCCTCCCTGTTCCCTGAGGGCAC < 41bp 1 0.478017773154427 1 0.439831525087357 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933337 chr7:75933345 nonsynonymous SNV 0.998 5 29 hm5C_associated_SNPs_46537 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:75933329-75933376
64251 chr17 30293184 30293184 1 + G A UCS 30293195 + 30293175 30293215 41 TCATTTGCAGCTTACGTTTACTGGTTTCTTCCACAAAAATG TCATTTGCAACTTACGTTTACTGGTTTCTTCCACAAAAATG < 41bp 1 0.466149004265889 1 0.103860348463058 experiment 1 Functional Loss 31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122262;BS-seq with improved protocol;Hela;NSUN2 Knockout SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30293195 chr17:30293184 synonymous SNV . 0 10 hm5C_associated_SNPs_46540 0 0 10 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:30293165-30293190
64251 chr17 47119660 47119660 1 + T C UVM 47119678 + 47119658 47119698 41 CATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA CACCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGA < 41bp 1 0.119698019351637 1 0.192812591791153 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119678 chr17:47119660 nonsynonymous SNV 0.992 1 3 hm5C_associated_SNPs_46541 0 0 20 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr17 47119660 47119660 1 + T C UVM 47119679 + 47119659 47119699 41 ATCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA ACCGAGAATTGTTGCAGGGCCGAGCAGGAAATAATGAAGAA < 41bp 1 0.362146479127785 1 0.258403986692429 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control IGF2BP1 ENSG00000159217 CDS Human protein_coding chr17:47119679 chr17:47119660 nonsynonymous SNV 0.992 1 2 hm5C_associated_SNPs_46542 0 0 20 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:47119607-47119682
64251 chr15 89694924 89694924 1 + A G UVM 89694926 + 89694906 89694946 41 AGATACATTCCACCGTTGATCTGGGGGAAAAGTGGACACAT AGATACATTCCACCGTTGGTCTGGGGGAAAAGTGGACACAT < 41bp 1 0.780223528269312 1 0.832948088645935 experiment 0.439552943461375 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89694926 chr15:89694924 nonsynonymous SNV 0.999 2 19 hm5C_associated_SNPs_46543 0 0 1 SND1 POSTAR2 ENCODE chr15:89694907-89695036
64251 chr17 73695881 73695881 1 + T C UVM 73695888 + 73695868 73695908 41 TTTTCTGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAA TTTTCTGAAAGAGCTCGGAACATGTCGCCTGATGAAATCAA < 41bp 1 0.168838094001429 1 0.130280613899231 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695888 chr17:73695881 nonsynonymous SNV 0.996 1 14 hm5C_associated_SNPs_46557 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695881 73695881 1 + T C UVM 73695893 + 73695873 73695913 41 TGAAAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCC TGAAAGAGCTCGGAACATGTCGCCTGATGAAATCAAGATCC < 41bp 1 0.709885767462226 1 0.426206052303314 experiment 0.580228465075547 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695893 chr17:73695881 nonsynonymous SNV 0.996 1 9 hm5C_associated_SNPs_46558 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 73695881 73695881 1 + T C UVM 73695896 + 73695876 73695916 41 AAGAGTTCGGAACATGTCGCCTGATGAAATCAAGATCCCGC AAGAGCTCGGAACATGTCGCCTGATGAAATCAAGATCCCGC < 41bp 1 0.328199989048477 1 0.178685754537582 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73695896 chr17:73695881 nonsynonymous SNV 0.996 1 6 hm5C_associated_SNPs_46559 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:73695866-73695906
64251 chr17 71239111 71239111 1 + C G UVM 71239105 + 71239085 71239125 41 ACGATGCTCTTCACAGGATACTTCGTCCTGTGTTGTAGCTG ACGATGCTCTTCACAGGATACTTCGTGCTGTGTTGTAGCTG < 41bp 1 0.426194955412226 1 0.051678866147995 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71239105 chr17:71239111 synonymous SNV . 0 27 hm5C_associated_SNPs_46560 0 0 3 PPIG POSTAR2 ENCODE chr17:71239026-71239127
64251 chr9 139734309 139734309 1 + G C UVM 139734292 + 139734272 139734312 41 GGGCTGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCAGTGA GGGCTGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCACTGA < 41bp 1 0.246782300019568 1 0.784770727157593 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734292 chr9:139734309 nonsynonymous SNV 0.093 2 38 hm5C_associated_SNPs_46561 0 0 5 GRWD1 POSTAR2 ENCODE chr9:139734248-139734311
64251 chr9 139734309 139734309 1 + G C UVM 139734296 + 139734276 139734316 41 TGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCAGTGAGGAA TGGGGCTGGAGGAGGCCGGACCCAAGGAGAGCACTGAGGAA < 41bp 1 0.314673846434312 1 0.179113507270813 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734296 chr9:139734309 nonsynonymous SNV 0.093 2 34 hm5C_associated_SNPs_46562 0 0 5 GRWD1 POSTAR2 ENCODE chr9:139734248-139734311
64251 chr9 139734309 139734309 1 + G C UVM 139734298 + 139734278 139734318 41 GGGCTGGAGGAGGCCGGACCCAAGGAGAGCAGTGAGGAAGG GGGCTGGAGGAGGCCGGACCCAAGGAGAGCACTGAGGAAGG < 41bp 1 0.740992812382603 1 0.832200884819031 experiment 0.518014375234793 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RABL6 ENSG00000196642 CDS Human protein_coding chr9:139734298 chr9:139734309 nonsynonymous SNV 0.093 2 32 hm5C_associated_SNPs_46563 0 0 5 GRWD1 POSTAR2 ENCODE chr9:139734248-139734311
64251 chr18 13096255 13096255 1 + G T UVM 13096273 + 13096253 13096293 41 CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT CTTGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGAT < 41bp 1 0.123463033411871 1 0.119163662195206 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CEP192 ENSG00000101639 CDS Human protein_coding chr18:13096273 chr18:13096255 nonsynonymous SNV 1.000 4 3 hm5C_associated_SNPs_46565 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:13096223-13096262
64251 chr2 182786871 182786871 1 + G A UVM 182786886 + 182786866 182786906 41 AGTGGGCAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAG AGTGGACAAATCCAAAACCCCATTAGTGGCAAGGAAGAAAG < 41bp 1 0.316206458267397 1 0.0724817216396332 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786886 chr2:182786871 nonsynonymous SNV 0.327 0 6 hm5C_associated_SNPs_46566 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:182786857-182786895
64251 chr22 29674050 29674050 1 + C G UVM 29674054 + 29674034 29674074 41 CTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGC CTGCCCCCCAGGCATAGAGCCAGCCTGTCCAGGGGTATGGC < 41bp 1 0.271368067773117 1 0.05897456407547 experiment 1 Functional Loss 28418038;GSE93752;RNA-BisSeq;HeLa;Control EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29674054 chr22:29674050 stopgain 0.998 0 17 hm5C_associated_SNPs_46567 0 0 2 BUD13 POSTAR2 ENCODE chr22:29674008-29674052
64251 chr11 722155 722155 1 + C T UVM 722139 + 722119 722159 41 CCAGCGCCGCGGAGCTCGTGCACTTCCTCTTCGGGCCTCTG CCAGCGCCGCGGAGCTCGTGCACTTCCTCTTCGGGCTTCTG < 41bp 1 0.0912939064877734 1 0.0163136124610901 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722139 chr11:722155 nonsynonymous SNV 0.995 3 37 hm5C_associated_SNPs_46568 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722154-722166
64251 chr11 722155 722155 1 + C T UVM 722163 + 722143 722183 41 TCCTCTTCGGGCCTCTGGACCTGGTGCCTGGGGCCGGGCGG TCCTCTTCGGGCTTCTGGACCTGGTGCCTGGGGCCGGGCGG < 41bp 1 0.741920452698355 1 0.239225149154663 experiment 0.516159094603291 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722163 chr11:722155 nonsynonymous SNV 0.995 3 13 hm5C_associated_SNPs_46569 0 0 4 GRWD1 POSTAR2 ENCODE chr11:722154-722166
64251 chr4 144336795 144336795 1 + G A UVM 144336803 + 144336783 144336823 41 AAAAAAGAGTTTGAAAACAGCTACATTTTTGATATCAACAC AAAAAAGAGTTTAAAAACAGCTACATTTTTGATATCAACAC < 41bp 1 0.525760986634933 1 0.20692640542984 experiment 0.948478026730134 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control GAB1 ENSG00000109458 CDS Human protein_coding chr4:144336803 chr4:144336795 nonsynonymous SNV 1.000 3 13 hm5C_associated_SNPs_46570 0 0 1 RBM15 POSTAR2 ENCODE chr4:144336751-144336893
64251 chr6 31593371 31593371 1 + G A UVM 31593351 + 31593331 31593371 41 GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCG GCTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCA < 41bp 1 0.360454838219662 1 0.0941270291805267 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593351 chr6:31593371 nonsynonymous SNV 1.000 4 41 hm5C_associated_SNPs_46598 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593371 31593371 1 + G A UVM 31593352 + 31593332 31593372 41 CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGG CTACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCAG < 41bp 1 0.360329432608389 1 0.140684545040131 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593352 chr6:31593371 nonsynonymous SNV 1.000 4 40 hm5C_associated_SNPs_46599 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593371 31593371 1 + G A UVM 31593353 + 31593333 31593373 41 TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCGGA TACAGCCTTCAGGCCCACCCCAGTTCCCTCCCTACCGCAGA < 41bp 1 0.288224352695684 1 0.268606781959534 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control|31358969;GSE133671;RNA-BisSeq;T24;NSUN2 deficient|31358969;GSE133672;RNA-BisSeq;T24;Control|28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593353 chr6:31593371 nonsynonymous SNV 1.000 4 39 hm5C_associated_SNPs_46600 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr6 31593371 31593371 1 + G A UVM 31593388 + 31593368 31593408 41 CGCGGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC CGCAGAATGATGCCGCCTTTCGTGAGTCTTGGTGTCTTGTC < 41bp 1 0.646796459124704 1 0.727220773696899 experiment 0.706407081750592 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PRRC2A ENSG00000204469 CDS Human protein_coding chr6:31593388 chr6:31593371 nonsynonymous SNV 1.000 4 4 hm5C_associated_SNPs_46601 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:31593302-31593382
64251 chr12 14650705 14650705 1 + G A UVM 14650689 + 14650669 14650709 41 TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCGTTCA TCTCTGCCTCAGAAGCCACACTTGAAGTTAGCACGCATTCA < 41bp 1 0.665345537031098 1 0.323249340057373 experiment 0.669308925937805 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650689 chr12:14650705 nonsynonymous SNV 1.000 4 37 hm5C_associated_SNPs_46602 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14650699-14650719
64251 chr1 9416004 9416004 1 + G A UVM 9415999 + 9415979 9416019 41 AGACTGTGGACATGAGGGACCCCACGTACAGGCCCCTGAAG AGACTGTGGACATGAGGGACCCCACATACAGGCCCCTGAAG < 41bp 1 0.0929052397113203 1 0.170907616615295 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9415999 chr1:9416004 synonymous SNV . 0 26 hm5C_associated_SNPs_46603 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:9416003-9416004
64251 chr22 50861960 50861960 1 + C T UVM 50861963 + 50861943 50861983 41 CCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCAC CCCGTCTGCATGGCGCCTGCCTCATGGCAGCACTGCTGCAC < 41bp 1 0.572825996801906 1 0.165966391563416 experiment 0.854348006396187 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PPP6R2 ENSG00000100239 CDS Human protein_coding chr22:50861963 chr22:50861960 nonsynonymous SNV 0.999 4 18 hm5C_associated_SNPs_46604 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50861959-50861981
64251 chr11 61106798 61106798 1 + G A UVM 61106796 + 61106776 61106816 41 GGCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGT GGCCTGGCCCGGGAGCAGGCCCAGGCTGAAGGCATCCCGGT < 41bp 1 0.502772560837722 1 0.323551893234253 experiment 0.994454878324556 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106796 chr11:61106798 nonsynonymous SNV 0.571 0 23 hm5C_associated_SNPs_46605 0 0 4 PPIG POSTAR2 ENCODE chr11:61106759-61106904
64251 chr11 61106798 61106798 1 + G A UVM 61106797 + 61106777 61106817 41 GCCTGGCCCGGGAGCAGGCCCGGGCTGAAGGCATCCCGGTG GCCTGGCCCGGGAGCAGGCCCAGGCTGAAGGCATCCCGGTG < 41bp 1 0.752568581116322 1 0.775952994823456 experiment 0.494862837767355 Functional Loss 30872485;GSE90963;RBS-Seq;HeLa;Control TKFC ENSG00000149476 CDS Human protein_coding chr11:61106797 chr11:61106798 nonsynonymous SNV 0.571 0 22 hm5C_associated_SNPs_46606 0 0 4 PPIG POSTAR2 ENCODE chr11:61106759-61106904
64251 chr1 6505934 6505934 1 + A G LAML 6505928 + 6505908 6505948 41 GCCTCCTGTAGGACCACAGGCAGCTGACATCTACATGCAGA GCCTCCTGTAGGACCACAGGCAGCTGGCATCTACATGCAGA < 41bp 1 0.322986975375819 1 0.463083148002625 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ESPN ENSG00000187017 CDS Human protein_coding chr1:6505928 chr1:6505934 nonsynonymous SNV 0.460 2 27 hm5C_associated_SNPs_46608 0 0 1 DDX24 POSTAR2 ENCODE chr1:6505890-6505952
64251 chr11 118267094 118267094 1 + T A LAML 118267077 + 118267057 118267097 41 CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAA CCCCTCACCATGGACCAGATCCGGCCAAACACAGAACAAAA < 41bp 1 0.239748516706805 1 0.181405365467072 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control UBE4A ENSG00000110344 CDS Human protein_coding chr11:118267077 chr11:118267094 nonsynonymous SNV 0.999 4 38 hm5C_associated_SNPs_46610 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118267033-118267106
64251 chr12 124181004 124181004 1 + G T LAML 124181019 + 124180999 124181039 41 CAACAGGATGAATAATGTCACGACTTTACATCTTTGGCAAT CAACATGATGAATAATGTCACGACTTTACATCTTTGGCAAT < 41bp 1 0.26619775250029 1 0.12005603313446 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124181019 chr12:124181004 nonsynonymous SNV 0.002 1 6 hm5C_associated_SNPs_46611 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:124180988-124181015
64251 chr22 22025318 22025318 1 + G A LAML 22025316 + 22025296 22025336 41 CAGCCCTTTGTCTACCCAGTCTGCACTCCCGATGGCATCGT CAGCCCTTTGTCTACCCAGTCTACACTCCCGATGGCATCGT < 41bp 1 0.408376865011113 1 0.239805579185486 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PPIL2 ENSG00000100023 CDS Human protein_coding chr22:22025316 chr22:22025318 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_46612 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:22025279-22025345
64251 chr15 69560925 69560925 1 + C T LAML 69560923 + 69560903 69560943 41 GACAACATTACCATCTCTACCACAGCCCACATGGCTGCATT GACAACATTACCATCTCTACCATAGCCCACATGGCTGCATT < 41bp 1 0.222763520936197 1 0.115506380796432 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control GLCE ENSG00000138604 CDS Human protein_coding chr15:69560923 chr15:69560925 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_46613 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:69560895-69560926
64251 chr5 71492162 71492162 1 + G A LAML 71492181 + 71492161 71492201 41 GGCCAGTGGGGATGACCGAGCCGAAGAAGACATGGATGAGG GACCAGTGGGGATGACCGAGCCGAAGAAGACATGGATGAGG < 41bp 1 0.425772953091443 1 0.430784463882446 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71492181 chr5:71492162 nonsynonymous SNV 0.998 0 2 hm5C_associated_SNPs_46614 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:71492108-71492174
64251 chr5 54641006 54641006 1 + C T LAML 54640986 + 54640966 54641006 41 TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGC TCGAGATGCAGGTGATTTGGCCAAAGGAGACCAGAAAGGGT < 41bp 1 0.474708368598779 1 0.681329965591431 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640986 chr5:54641006 nonsynonymous SNV 0.999 4 41 hm5C_associated_SNPs_46615 0 0 4 GRWD1 POSTAR2 ENCODE chr5:54640937-54641022
64251 chr5 54641006 54641006 1 + C T LAML 54640997 + 54640977 54641017 41 GTGATTTGGCCAAAGGAGACCAGAAAGGGCGGAAAGGAGGA GTGATTTGGCCAAAGGAGACCAGAAAGGGTGGAAAGGAGGA < 41bp 1 0.634563070293425 1 0.423268288373947 experiment 0.730873859413151 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640997 chr5:54641006 nonsynonymous SNV 0.999 4 30 hm5C_associated_SNPs_46616 0 0 4 GRWD1 POSTAR2 ENCODE chr5:54640937-54641022
64251 chr17 48631738 48631738 1 + G A LAML 48631727 + 48631707 48631747 41 TGTGTGTGCCTATTGACCGCCTTTTCCGAGCGCATGCGTCG TGTGTGTGCCTATTGACCGCCTTTTCCGAGCACATGCGTCG < 41bp 1 0.0412409789439358 1 0.02955362200737 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control SPATA20 ENSG00000006282 CDS Human protein_coding chr17:48631727 chr17:48631738 nonsynonymous SNV 0.997 4 32 hm5C_associated_SNPs_46618 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48631717-48631746
64251 chr14 23239047 23239047 1 + C T LAML 23239030 + 23239010 23239050 41 TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCCAGC TGCCCGCTGCCTGATTTTTCCTCTCATCGTGACGGGCTAGC < 41bp 1 0.278367741641664 1 0.0430866479873657 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239030 chr14:23239047 stopgain 1.000 1 38 hm5C_associated_SNPs_46619 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:23239020-23239048
64251 chr12 98926743 98926743 1 + C T LAML 98926754 + 98926734 98926774 41 GGGCAGTACCGAACTACAGGCAGCTAAGAAAGTACATACTT GGGCAGTACTGAACTACAGGCAGCTAAGAAAGTACATACTT < 41bp 1 0.453789514125035 1 0.244100034236908 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TMPO ENSG00000120802 CDS Human protein_coding chr12:98926754 chr12:98926743 synonymous SNV . 0 10 hm5C_associated_SNPs_46620 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr12:98926657-98926752
64251 chr8 95885675 95885675 1 + G C LAML 95885659 + 95885639 95885679 41 CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAAGGCTG CCAGGCAGGAGCTGTGTGTTCTGACTTCTTTAACAACGCTG < 41bp 1 0.619412299902896 1 0.164577424526215 experiment 0.761175400194208 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control INTS8 ENSG00000164941 CDS Human protein_coding chr8:95885659 chr8:95885675 nonsynonymous SNV 1.000 1 37 hm5C_associated_SNPs_46622 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:95885653-95885686
64251 chr11 61507974 61507974 1 + G A LAML 61507955 + 61507935 61507975 41 CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGGG CTGCTGTGAGCAGGAGGAGCCCACATACTTTGCCATCTGAG < 41bp 1 0.112009620910156 1 0.289801836013794 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507955 chr11:61507974 stopgain 1.000 1 40 hm5C_associated_SNPs_46624 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr11 61507974 61507974 1 + G A LAML 61507980 + 61507960 61508000 41 TACTTTGCCATCTGGGGCGACAACAAGGCCTTCAATGAGGT TACTTTGCCATCTGAGGCGACAACAAGGCCTTCAATGAGGT < 41bp 1 0.176603694020955 1 0.198753267526627 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507980 chr11:61507974 stopgain 1.000 1 15 hm5C_associated_SNPs_46625 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr16 67914545 67914545 1 + G A LAML 67914550 + 67914530 67914570 41 CCCCTAGCCGCACTCGTTCCCCTGATGTCATCTCCTCAGCT CCCCTAGCCGCACTCATTCCCCTGATGTCATCTCCTCAGCT < 41bp 1 0.420524747591387 1 0.315146952867508 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914550 chr16:67914545 nonsynonymous SNV 0.854 4 16 hm5C_associated_SNPs_46626 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:67914540-67914560
64251 chr12 57970117 57970117 1 + G T LAML 57970126 + 57970106 57970146 41 GCCCGGCTCCGGGACGAGATCAACGAGAAGCAGAAGACCAT GCCCGGCTCCGTGACGAGATCAACGAGAAGCAGAAGACCAT < 41bp 1 0.560324203403919 1 0.328804224729538 experiment 0.879351593192162 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control KIF5A ENSG00000155980 CDS Human protein_coding chr12:57970126 chr12:57970117 synonymous SNV . 0 12 hm5C_associated_SNPs_46627 0 0 1 BUD13 POSTAR2 ENCODE chr12:57970078-57970119
64251 chr6 47577008 47577008 1 + G A LAML 47577024 + 47577004 47577044 41 TGTTGTGCATTGTAGAAGCACTGAAAAAGGATCACGGGTAA TGTTATGCATTGTAGAAGCACTGAAAAAGGATCACGGGTAA < 41bp 1 0.643669335132884 1 0.387636005878448 experiment 0.712661329734233 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CD2AP ENSG00000198087 CDS Human protein_coding chr6:47577024 chr6:47577008 synonymous SNV . 0 5 hm5C_associated_SNPs_46628 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47576863-47577038
64251 chr20 44511398 44511398 1 + C T LAML 44511400 + 44511380 44511420 41 ACCAGGTTAACAAGACTGCCCAGTTAGATACCTTCAACTAC ACCAGGTTAACAAGACTGTCCAGTTAGATACCTTCAACTAC < 41bp 1 0.233177009092198 1 0.0977205634117126 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control ZSWIM1 ENSG00000168612 CDS Human protein_coding chr20:44511400 chr20:44511398 nonsynonymous SNV 0.984 0 19 hm5C_associated_SNPs_46629 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:44511367-44511403
64251 chr19 45495547 45495547 1 + C A LAML 45495555 + 45495535 45495575 41 AAGTCTGTGGCCCACCTTCCCTGGCGCATGCTCACCTACAA AAGTCTGTGGCCAACCTTCCCTGGCGCATGCTCACCTACAA < 41bp 1 0.723200155724806 1 0.727107167243958 experiment 0.553599688550389 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPTM1 ENSG00000104853 CDS Human protein_coding chr19:45495555 chr19:45495547 nonsynonymous SNV 0.904 4 13 hm5C_associated_SNPs_46630 0 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:45495499-45495563
64251 chr3 158015829 158015829 1 + G T LAML 158015833 + 158015813 158015853 41 ACTCTTCTATTTTAGGGAATCTGGAAACATCAAAGCTGGAT ACTCTTCTATTTTAGGTAATCTGGAAACATCAAAGCTGGAT < 41bp 1 0.761846457224919 1 0.729074418544769 experiment 0.476307085550161 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RSRC1 ENSG00000174891 CDS Human protein_coding chr3:158015833 chr3:158015829 stopgain 1.000 1 17 hm5C_associated_SNPs_46631 0 0 10 BUD13 POSTAR2 ENCODE chr3:158015823-158015865
64251 chr12 57892308 57892308 1 + G A LAML 57892311 + 57892291 57892331 41 GGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCAT GGACTAACCCCCCAGGAAATCTGCGACAAGTACCACATCAT < 41bp 1 0.717961457967385 1 0.651108384132385 experiment 0.564077084065231 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57892311 chr12:57892308 synonymous SNV . 0 18 hm5C_associated_SNPs_46634 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57892236-57892339
64251 chr1 32620260 32620260 1 + G A LAML 32620246 + 32620226 32620266 41 GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGA GAAGAGCTATAAGAACAATGCTCTAAACCCTGAAAAAATGA < 41bp 1 0.322347743055168 1 0.21581044793129 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620246 chr1:32620260 nonsynonymous SNV 0.999 4 35 hm5C_associated_SNPs_46635 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620260 32620260 1 + G A LAML 32620248 + 32620228 32620268 41 AGAGCTATAAGAACAATGCTCTAAACCCTGAAGAAATGAGA AGAGCTATAAGAACAATGCTCTAAACCCTGAAAAAATGAGA < 41bp 1 0.266574077449196 1 0.185256481170654 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620248 chr1:32620260 nonsynonymous SNV 0.999 4 33 hm5C_associated_SNPs_46636 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620260 32620260 1 + G A LAML 32620253 + 32620233 32620273 41 TATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAG TATAAGAACAATGCTCTAAACCCTGAAAAAATGAGACGAAG < 41bp 1 0.189615135957369 1 0.261202394962311 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620253 chr1:32620260 nonsynonymous SNV 0.999 4 28 hm5C_associated_SNPs_46637 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr1 32620260 32620260 1 + G A LAML 32620254 + 32620234 32620274 41 ATAAGAACAATGCTCTAAACCCTGAAGAAATGAGACGAAGA ATAAGAACAATGCTCTAAACCCTGAAAAAATGAGACGAAGA < 41bp 1 0.275793984772246 1 0.467492878437042 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32620254 chr1:32620260 nonsynonymous SNV 0.999 4 27 hm5C_associated_SNPs_46638 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32620245-32620270
64251 chr21 38568175 38568175 1 + G A LAML 38568183 + 38568163 38568203 41 CTCAGCTGACAGGGCCAAAACGGGCTGGCCAGGCAGCTCTG CTCAGCTGACAGAGCCAAAACGGGCTGGCCAGGCAGCTCTG < 41bp 1 0.78951853844721 1 0.772508442401886 experiment 0.42096292310558 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control|31061524;GSE122261;BS-seq with improved protocol;Hela;Control|31061524;GSE122263;BS-seq with improved protocol;Frontal cortex;Control|31061524;GSE122267;BS-seq with improved protocol;Muscle;Control|31061524;GSE122269;BS-seq with improved protocol;Testis;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control TTC3 ENSG00000182670 CDS Human protein_coding chr21:38568183 chr21:38568175 nonsynonymous SNV 0.000 0 13 hm5C_associated_SNPs_46639 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr21:38568139-38568194
64251 chr5 82868289 82868289 1 + G A LAML 82868273 + 82868253 82868293 41 CCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTG CCCAACCAGCCAGACAGCTTCTTTTCTGCTGGAGAAAACTG < 41bp 1 0.0258622156997221 1 0.0271070003509521 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868273 chr5:82868289 nonsynonymous SNV 0.996 3 37 hm5C_associated_SNPs_46640 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868274-82868316
64251 chr5 82868289 82868289 1 + G A LAML 82868278 + 82868258 82868298 41 CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAGACTGTGTTG CCAGCCAGACAGCTTCTTTTCTGCTGGAGAAAACTGTGTTG < 41bp 1 0.52264342020905 1 0.462535679340363 experiment 0.9547131595819 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control VCAN ENSG00000038427 CDS Human protein_coding chr5:82868278 chr5:82868289 nonsynonymous SNV 0.996 3 32 hm5C_associated_SNPs_46641 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:82868274-82868316
64251 chr9 131559367 131559367 1 + G A LAML 131559385 + 131559365 131559405 41 AGGGCCACTGACTACCCTTGCCTCCTCATCCTGGACCCCCA AGAGCCACTGACTACCCTTGCCTCCTCATCCTGGACCCCCA < 41bp 1 0.0499212403283682 1 0.054042637348175 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TBC1D13 ENSG00000107021 CDS Human protein_coding chr9:131559385 chr9:131559367 synonymous SNV . 0 3 hm5C_associated_SNPs_46643 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:131559347-131559374
64251 chr1 117617662 117617662 1 + T A LAML 117617658 + 117617638 117617678 41 TGAAGGTGAGGAAAAGAAGGCTGATAAGAAGCAAAGAGAAA TGAAGGTGAGGAAAAGAAGGCTGAAAAGAAGCAAAGAGAAA < 41bp 1 0.50243788236204 1 0.281635165214539 experiment 0.99512423527592 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTF2 ENSG00000116830 CDS Human protein_coding chr1:117617658 chr1:117617662 nonsynonymous SNV 0.071 1 25 hm5C_associated_SNPs_46644 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117617632-117617669
64251 chr1 117617662 117617662 1 + T A LAML 117617669 + 117617649 117617689 41 AAAAGAAGGCTGATAAGAAGCAAAGAGAAAAGGGAGATCAG AAAAGAAGGCTGAAAAGAAGCAAAGAGAAAAGGGAGATCAG < 41bp 1 0.555846489991295 1 0.707179605960846 experiment 0.88830702001741 Functional Loss 30526041;GSE122414;RNA-BisSeq;HEK293;NSUN2 Knockout TTF2 ENSG00000116830 CDS Human protein_coding chr1:117617669 chr1:117617662 nonsynonymous SNV 0.071 1 14 hm5C_associated_SNPs_46645 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117617632-117617669
64251 chr3 47385201 47385201 1 + T C LAML 47385197 + 47385177 47385217 41 CTCAGCATTGCCGAGATGTACAGCTCTGTGGCAGACCAGTG CTCAGCATTGCCGAGATGTACAGCCCTGTGGCAGACCAGTG < 41bp 1 0.386152742218445 1 0.129119485616684 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385197 chr3:47385201 nonsynonymous SNV 0.981 1 25 hm5C_associated_SNPs_46647 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:47385187-47385232
64251 chr3 132394124 132394124 1 + A T LAML 132394139 + 132394119 132394159 41 TTTTTACCTTGGATACAATGCAATGCAGGATTTTTTTCCTA TTTTTTCCTTGGATACAATGCAATGCAGGATTTTTTTCCTA < 41bp 1 0.313946380688994 1 0.157161056995392 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control UBA5 ENSG00000081307 CDS Human protein_coding chr3:132394139 chr3:132394124 nonsynonymous SNV 1.000 1 6 hm5C_associated_SNPs_46648 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:132394093-132394140
64251 chr5 102343181 102343181 1 + C A LAML 102343174 + 102343154 102343194 41 TCTGCAGAGTCTTCAGGGAGCAGTCCTCTGCCAGGCCAGTT TCTGCAGAGTCTTCAGGGAGCAGTCCTATGCCAGGCCAGTT < 41bp 1 0.151650230687766 1 0.255195260047913 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PAM ENSG00000145730 CDS Human protein_coding chr5:102343174 chr5:102343181 nonsynonymous SNV 0.683 0 28 hm5C_associated_SNPs_46650 0 0 1 RPS3 POSTAR2 ENCODE chr5:102343167-102343261
64251 chr19 13930251 13930251 1 + G A LAML 13930238 + 13930218 13930258 41 CCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCT CCCATGCACACCTGTGCCCGCTACCTGTTCACCACACTGCT < 41bp 1 0.108201115561226 1 0.0762214660644531 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ZSWIM4 ENSG00000132003 CDS Human protein_coding chr19:13930238 chr19:13930251 nonsynonymous SNV 0.889 0 34 hm5C_associated_SNPs_46651 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:13930232-13930263
64251 chr22 38168624 38168624 1 + C T LAML 38168604 + 38168584 38168624 41 TCATACCTGCCTCCTGCCCCCCAGGACAAGCGCTTCACCTC TCATACCTGCCTCCTGCCCCCCAGGACAAGCGCTTCACCTT < 41bp 1 0.144386701894157 1 0.263983815908432 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38168604 chr22:38168624 nonsynonymous SNV 0.975 3 41 hm5C_associated_SNPs_46654 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38168614-38168641
64251 chr22 38168624 38168624 1 + C T LAML 38168605 + 38168585 38168625 41 CATACCTGCCTCCTGCCCCCCAGGACAAGCGCTTCACCTCG CATACCTGCCTCCTGCCCCCCAGGACAAGCGCTTCACCTTG < 41bp 1 0.483333145955962 1 0.851590991020203 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control TRIOBP ENSG00000100106 CDS Human protein_coding chr22:38168605 chr22:38168624 nonsynonymous SNV 0.975 3 40 hm5C_associated_SNPs_46655 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38168614-38168641
64251 chr8 22054839 22054839 1 + C T LAML 22054853 + 22054833 22054873 41 GAAGCCCGAGGTCATCACCTCCCAGTACAACAACATGCGCG GAAGCCTGAGGTCATCACCTCCCAGTACAACAACATGCGCG < 41bp 1 0.132823223766024 1 0.149817824363708 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control BMP1 ENSG00000168487 CDS Human protein_coding chr8:22054853 chr8:22054839 synonymous SNV . 0 7 hm5C_associated_SNPs_46656 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22054815-22054845
64251 chrX 133547576 133547576 1 + T A LAML 133547561 + 133547541 133547581 41 AATGAACATGAACTGGAGCCCTCATCACCTAAAAGTAAAAA AATGAACATGAACTGGAGCCCTCATCACCTAAAAGAAAAAA < 41bp 1 0.162818956113026 1 0.150600880384445 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control PHF6 ENSG00000156531 CDS Human protein_coding chrX:133547561 chrX:133547576 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_46657 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:133547540-133547576
64251 chr20 2097424 2097424 1 + C A LAML 2097414 + 2097394 2097434 41 GTATGTCCTGTCCCGGAGGCCAGACCCAGCCACCAACAAAA GTATGTCCTGTCCCGGAGGCCAGACCCAGCAACCAACAAAA < 41bp 1 0.11220733141859 1 0.378409445285797 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient STK35 ENSG00000125834 CDS Human protein_coding chr20:2097414 chr20:2097424 synonymous SNV . 0 31 hm5C_associated_SNPs_46658 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:2097400-2097435
64251 chr17 38152546 38152546 1 + C T LAML 38152535 + 38152515 38152555 41 ATTCCACCCGAGAGCCCCAGCTAGCCTTCCACCAGCGCATC ATTCCACCCGAGAGCCCCAGCTAGCCTTCCATCAGCGCATC < 41bp 1 0.381245905751617 1 0.111271113157272 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control PSMD3 ENSG00000108344 CDS Human protein_coding chr17:38152535 chr17:38152546 synonymous SNV . 0 32 hm5C_associated_SNPs_46660 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:38152518-38152546
64251 chr1 24019178 24019178 1 + G A LAML 24019185 + 24019165 24019205 41 TGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAA TGTGTTGGGGAGAATGGAGACAGACTGACGCGAGCAGCCAA < 41bp 1 0.739959925204428 1 0.309301614761353 experiment 0.520080149591143 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RPL11 ENSG00000142676 CDS Human protein_coding chr1:24019185 chr1:24019178 nonsynonymous SNV 0.999 2 14 hm5C_associated_SNPs_46661 0 0 63 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24019099-24019199
64251 chr17 15907567 15907567 1 + C T LAML 15907552 + 15907532 15907572 41 TGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGCGCAGA TGAAATTTCCCTAAAGCTGGCCAGTATCTATGCTGTGCAGA < 41bp 1 0.108902748247854 1 0.0754283368587494 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control TTC19 ENSG00000011295 CDS Human protein_coding chr17:15907552 chr17:15907567 nonsynonymous SNV 0.995 1 36 hm5C_associated_SNPs_46665 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:15907526-15907572
64251 chr11 8934046 8934046 1 + C A LAML 8934032 + 8934012 8934052 41 CCCCCAACCCTTAGTGCTTCCTTCAGAACAATGGCTGAATT CCCCCAACCCTTAGTGCTTCCTTCAGAACAATGGATGAATT < 41bp 1 0.4757308229136 1 0.30458265542984 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8934032 chr11:8934046 nonsynonymous SNV 0.994 3 35 hm5C_associated_SNPs_46668 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:8934010-8934048
64251 chr7 99627499 99627499 1 + A G LAML 99627493 + 99627473 99627513 41 TCCTCCCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCC TCCTCCCCCAGCTCTTCCTGCTGCCCGCATTCCTGCACCCC < 41bp 1 0.289729830306364 1 0.0856516659259796 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627493 chr7:99627499 nonsynonymous SNV 0.257 0 27 hm5C_associated_SNPs_46669 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:99627498-99627499
64251 chr7 99627499 99627499 1 + A G LAML 99627498 + 99627478 99627518 41 CCCCAGCTCTTCCTGCTGCCCACATTCCTGCACCCCCTCAT CCCCAGCTCTTCCTGCTGCCCGCATTCCTGCACCCCCTCAT < 41bp 1 0.586206336849641 1 0.201083093881607 experiment 0.827587326300719 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control ZKSCAN1 ENSG00000106261 CDS Human protein_coding chr7:99627498 chr7:99627499 nonsynonymous SNV 0.257 0 22 hm5C_associated_SNPs_46670 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:99627498-99627499
64251 chr15 41865248 41865248 1 + G A LAML 41865260 + 41865240 41865280 41 TTGCCTGCGGCATGGAGTACCTGAGCTCTCGGAACTTCATC TTGCCTGCAGCATGGAGTACCTGAGCTCTCGGAACTTCATC < 41bp 1 0.42234032641187 1 0.099297046661377 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41865260 chr15:41865248 nonsynonymous SNV 1.000 3 9 hm5C_associated_SNPs_46671 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:41865230-41865249
64251 chr19 6362553 6362553 1 + G A LAML 6362549 + 6362529 6362569 41 ATCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTC ATCCACATGTACATCAACAGCCCTAGTGAGCAGGGTCTTTC < 41bp 1 0.344358302744854 1 0.0274717509746552 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6362549 chr19:6362553 nonsynonymous SNV 0.903 4 25 hm5C_associated_SNPs_46672 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr19 6362553 6362553 1 + G A LAML 6362550 + 6362530 6362570 41 TCCACATGTACATCAACAGCCCTGGTGAGCAGGGTCTTTCC TCCACATGTACATCAACAGCCCTAGTGAGCAGGGTCTTTCC < 41bp 1 0.09427717839836 1 0.0615889728069305 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control CLPP ENSG00000125656 CDS Human protein_coding chr19:6362550 chr19:6362553 nonsynonymous SNV 0.903 4 24 hm5C_associated_SNPs_46673 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:6362537-6362556
64251 chr9 139228926 139228926 1 + C A LAML 139228915 + 139228895 139228935 41 TCTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGG TCTGCACAGGATGGAGGCGTCCTGCCTAGAGATGGCGCTGG < 41bp 1 0.155009415237284 1 0.154563069343567 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228915 chr9:139228926 nonsynonymous SNV 0.955 3 32 hm5C_associated_SNPs_46674 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr9 139228926 139228926 1 + C A LAML 139228916 + 139228896 139228936 41 CTGCACAGGATGGAGGCGTCCTGCCTAGAGCTGGCGCTGGA CTGCACAGGATGGAGGCGTCCTGCCTAGAGATGGCGCTGGA < 41bp 1 0.471627029295275 1 0.224612504243851 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139228916 chr9:139228926 nonsynonymous SNV 0.955 3 31 hm5C_associated_SNPs_46675 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:139228920-139228940
64251 chr5 71491693 71491693 1 + C T LAML 71491699 + 71491679 71491719 41 CCTGAGGATCTAACCAAGGACTTTGAAGAGTTAAAGGCTGA CCTGAGGATCTAACTAAGGACTTTGAAGAGTTAAAGGCTGA < 41bp 1 0.0548177184466941 1 0.0991254448890686 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control MAP1B ENSG00000131711 CDS Human protein_coding chr5:71491699 chr5:71491693 synonymous SNV . 0 15 hm5C_associated_SNPs_46676 0 0 18 LIN28A POSTAR2 GSE44616,GSM1087848 chr5:71491667-71491709
64251 chr20 37144940 37144940 1 + C A LAML 37144939 + 37144919 37144959 41 GCAAGAATTGAATCAGTATCCCTGCCTTAAACATCTGCCTC GCAAGAATTGAATCAGTATCCATGCCTTAAACATCTGCCTC < 41bp 1 0.302640521775024 1 0.386873066425323 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37144939 chr20:37144940 synonymous SNV . 0 22 hm5C_associated_SNPs_46677 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:37144935-37144960
64251 chr19 54377043 54377043 1 + T A LAML 54377053 + 54377033 54377073 41 ATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC ATCGTGGAGCAGTGCGGGCTCCAGGCCCGCTTCCCCCTGTC < 41bp 1 0.679583244802233 1 0.908292233943939 experiment 0.640833510395534 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control MYADM ENSG00000179820 CDS Human protein_coding chr19:54377053 chr19:54377043 nonsynonymous SNV 0.037 1 11 hm5C_associated_SNPs_46678 0 0 4 IGF2BP1 POSTAR2 ENCODE chr19:54376999-54377063
64251 chr12 53428441 53428441 1 + G A LAML 53428436 + 53428416 53428456 41 AAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAG AAGAAACTCAGGAACGGGAACGGTCAAGGACAGGAAGTGAG < 41bp 1 0.188830324399445 1 0.532856225967407 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EIF4B ENSG00000063046 CDS Human protein_coding chr12:53428436 chr12:53428441 synonymous SNV . 0 26 hm5C_associated_SNPs_46679 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:53428440-53428460
64251 chr16 16103700 16103700 1 + G A LAML 16103711 + 16103691 16103731 41 AAAGAAGTCGGGGCATATTCCTGGCCCCAGTGTTTCTGGTC AAAGAAGTCAGGGCATATTCCTGGCCCCAGTGTTTCTGGTC < 41bp 1 0.472516449856821 1 0.300415635108948 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control ABCC1 ENSG00000103222 CDS Human protein_coding chr16:16103711 chr16:16103700 nonsynonymous SNV 0.535 0 10 hm5C_associated_SNPs_46680 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:16103690-16103713
64251 chr17 38320064 38320064 1 + C T LAML 38320054 + 38320034 38320074 41 ATCTCCAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGA ATCTCCAGAAGCAGATGCTCCAGTGCTTGGTAGTCCTGAGA < 41bp 1 0.395346413733866 1 0.421825557947159 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320054 chr17:38320064 synonymous SNV . 0 31 hm5C_associated_SNPs_46681 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr17 38320064 38320064 1 + C T LAML 38320059 + 38320039 38320079 41 CAGAAGCAGATGCTCCAGTGCTTGGCAGTCCTGAGAAGGAA CAGAAGCAGATGCTCCAGTGCTTGGTAGTCCTGAGAAGGAA < 41bp 1 0.470702258602934 1 0.149174302816391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320059 chr17:38320064 synonymous SNV . 0 26 hm5C_associated_SNPs_46682 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr17 38320064 38320064 1 + C T LAML 38320069 + 38320049 38320089 41 TGCTCCAGTGCTTGGCAGTCCTGAGAAGGAAGAGGCAGCCT TGCTCCAGTGCTTGGTAGTCCTGAGAAGGAAGAGGCAGCCT < 41bp 1 0.646554635280669 1 0.145810693502426 experiment 0.706890729438662 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320069 chr17:38320064 synonymous SNV . 0 16 hm5C_associated_SNPs_46683 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:38320031-38320067
64251 chr19 19308376 19308376 1 + C T LAML 19308370 + 19308350 19308390 41 CCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGC CCAGACGAGCGCGGCTTCACCCCCCTTATCTGGGCCTCCGC < 41bp 1 0.435021544361656 1 0.0621769428253174 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308370 chr19:19308376 synonymous SNV . 0 27 hm5C_associated_SNPs_46685 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr19 19308376 19308376 1 + C T LAML 19308371 + 19308351 19308391 41 CAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCGCC CAGACGAGCGCGGCTTCACCCCCCTTATCTGGGCCTCCGCC < 41bp 1 0.364263472691098 1 0.0675775408744812 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308371 chr19:19308376 synonymous SNV . 0 26 hm5C_associated_SNPs_46686 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr7 104717836 104717836 1 + T C LAML 104717824 + 104717804 104717844 41 GATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAG GATGCACTTATCATTGAATACAGAGGGAAGTTCATGCTGAG < 41bp 1 0.537452485494253 1 0.738030791282654 experiment 0.925095029011494 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KMT2E ENSG00000005483 CDS Human protein_coding chr7:104717824 chr7:104717836 synonymous SNV . 0 33 hm5C_associated_SNPs_46687 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:104717787-104717863
64251 chr12 109637325 109637325 1 + G A LAML 109637339 + 109637319 109637359 41 GGCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT GGCCACATTGAGGCTGGGAGCAGCTACGCTGAGATGGAGGT < 41bp 1 0.244657361214408 1 0.688476145267487 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control ACACB ENSG00000076555 CDS Human protein_coding chr12:109637339 chr12:109637325 nonsynonymous SNV 0.827 1 7 hm5C_associated_SNPs_46688 0 0 1 PRPF8 POSTAR2 ENCODE chr12:109637311-109637400
64251 chr16 31473266 31473266 1 + A G LAML 31473271 + 31473251 31473291 41 CTTCAGTGCATGAAGACAGACAGCATCCAGAACCGAACGGC CTTCAGTGCATGAAGGCAGACAGCATCCAGAACCGAACGGC < 41bp 1 0.685863288204596 1 0.457324326038361 experiment 0.628273423590808 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control ARMC5 ENSG00000140691 CDS Human protein_coding chr16:31473271 chr16:31473266 nonsynonymous SNV 0.998 0 16 hm5C_associated_SNPs_46689 0 0 3 BUD13 POSTAR2 ENCODE chr16:31473258-31473356
64251 chr11 14666572 14666572 1 + G A LAML 14666571 + 14666551 14666591 41 TTGCAAAATATTCAGGAGACCGTCGTTGCCTTGTATTTCCA TTGCAAAATATTCAGGAGACCATCGTTGCCTTGTATTTCCA < 41bp 1 0.163974511955926 1 0.070493072271347 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control PDE3B ENSG00000152270 CDS Human protein_coding chr11:14666571 chr11:14666572 synonymous SNV . 0 22 hm5C_associated_SNPs_46690 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:14666553-14666575
64251 chr6 26205123 26205123 1 + C T LAML 26205141 + 26205121 26205161 41 AGCGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA AGTGATGGATGTGGTCTACGCGCTGAAGAGACAGGGACGCA < 41bp 1 0.748421598375375 1 0.252852022647858 experiment 0.50315680324925 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control HIST1H4E ENSG00000198518 CDS Human other chr6:26205141 chr6:26205123 nonsynonymous SNV 0.030 0 3 hm5C_associated_SNPs_46691 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:26204840-26205140
64251 chr17 46128919 46128919 1 + C T LAML 46128901 + 46128881 46128921 41 CAGGCCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGCAG CAGGCCCAGACAACGGGGTGCGAGAAAGCGAAACGGAGTAG < 41bp 1 0.641384099931389 1 0.400146305561066 experiment 0.717231800137222 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128901 chr17:46128919 stopgain 1.000 0 39 hm5C_associated_SNPs_46693 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128900-46128920
64251 chr17 46128919 46128919 1 + C T LAML 46128909 + 46128889 46128929 41 GACAACGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGG GACAACGGGGTGCGAGAAAGCGAAACGGAGTAGGGATTCGG < 41bp 1 0.716677015289396 1 0.590491056442261 experiment 0.566645969421208 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128909 chr17:46128919 stopgain 1.000 0 31 hm5C_associated_SNPs_46694 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128900-46128920
64251 chr17 46128919 46128919 1 + C T LAML 46128914 + 46128894 46128934 41 CGGGGTGCGAGAAAGCGAAACGGAGCAGGGATTCGGTGAAG CGGGGTGCGAGAAAGCGAAACGGAGTAGGGATTCGGTGAAG < 41bp 1 0.7149211090233 1 0.81730318069458 experiment 0.570157781953399 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128914 chr17:46128919 stopgain 1.000 0 26 hm5C_associated_SNPs_46695 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128900-46128920
64251 chr17 46128919 46128919 1 + C T LAML 46128927 + 46128907 46128947 41 AGCGAAACGGAGCAGGGATTCGGTGAAGATTTGGAGGATTT AGCGAAACGGAGTAGGGATTCGGTGAAGATTTGGAGGATTT < 41bp 1 0.602340952074109 1 0.597232460975647 experiment 0.795318095851782 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128927 chr17:46128919 stopgain 1.000 0 13 hm5C_associated_SNPs_46696 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46128900-46128920
64251 chr9 96323483 96323483 1 + C T LAML 96323490 + 96323470 96323510 41 GGGCCGTGGGGGCCGGGGGCCTTTCCCCCTGCAGGTGGTTT GGGCCGTGGGGGCTGGGGGCCTTTCCCCCTGCAGGTGGTTT < 41bp 1 0.048588605120707 1 0.0615107119083405 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control FAM120A ENSG00000048828 CDS Human protein_coding chr9:96323490 chr9:96323483 nonsynonymous SNV 0.999 4 14 hm5C_associated_SNPs_46701 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:96323444-96323506
64251 chr8 30332325 30332325 1 + C A LAML 30332319 + 30332299 30332339 41 GGACCCTATTTGTCAGTGGCCTTCCTCTGGATATCAAACCT GGACCCTATTTGTCAGTGGCCTTCCTATGGATATCAAACCT < 41bp 1 0.0784029625722687 1 0.0345578193664551 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control RBPMS ENSG00000157110 CDS Human protein_coding chr8:30332319 chr8:30332325 nonsynonymous SNV 0.994 1 27 hm5C_associated_SNPs_46703 0 0 12 HNRNPD POSTAR2 GSE52971,GSM1279665 chr8:30332300-30332340
64251 chr20 37570735 37570735 1 + G A LAML 37570736 + 37570716 37570756 41 TCTCAATTTCTGGATATGTGCATGGATCTGAAAGTTCATCC TCTCAATTTCTGGATATGTACATGGATCTGAAAGTTCATCC < 41bp 1 0.474776149159339 1 0.178405523300171 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570736 chr20:37570735 nonsynonymous SNV 1.000 4 20 hm5C_associated_SNPs_46704 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37570719-37570750
64251 chr2 27277590 27277590 1 + G A LAML 27277595 + 27277575 27277615 41 TCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGT TCACTTCCTGCCATGAGCTTCGAGAAGATCGAGAGCCCCGT < 41bp 1 0.655587359370137 1 0.758910536766052 experiment 0.688825281259726 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27277595 chr2:27277590 nonsynonymous SNV 0.999 4 16 hm5C_associated_SNPs_46707 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27277576-27277601
64251 chr22 38021843 38021843 1 + T C LAML 38021859 + 38021839 38021879 41 GATCTCCCGCCTGCGGGCACCACCTACCCAGCTATGCCCAC GATCCCCCGCCTGCGGGCACCACCTACCCAGCTATGCCCAC < 41bp 1 0.333898255230926 1 0.273749887943268 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control GGA1 ENSG00000100083 CDS Human protein_coding chr22:38021859 chr22:38021843 nonsynonymous SNV 0.902 0 5 hm5C_associated_SNPs_46708 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38021810-38021848
64251 chr21 30714966 30714966 1 + C A LAML 30714981 + 30714961 30715001 41 CTGACCGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA CTGACAGGCCTCCAGCAGTGCTGCCTCCCTGTGCCAGAGGA < 41bp 1 0.310600254705105 1 0.133064925670624 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714981 chr21:30714966 synonymous SNV . 0 6 hm5C_associated_SNPs_46709 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30714940-30714980
64251 chr12 54394196 54394196 1 + T C LAML 54394180 + 54394160 54394200 41 GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGTGGTA GCACGTCGTGGGCGCCCGTGCCCTCTCAGTCGTCCGCGGTA < 41bp 1 0.214204972025928 1 0.0515020191669464 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394180 chr12:54394196 nonsynonymous SNV 0.999 2 37 hm5C_associated_SNPs_46711 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54394180-54394220
64251 chr15 57554384 57554384 1 + T A LAML 57554365 + 57554345 57554385 41 GTCTAGTACAGTCACTACTTCAAGCACAGACCTGAACCATA GTCTAGTACAGTCACTACTTCAAGCACAGACCTGAACCAAA < 41bp 1 0.225228212236365 1 0.676103591918945 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554365 chr15:57554384 nonsynonymous SNV 0.999 2 40 hm5C_associated_SNPs_46713 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554384 57554384 1 + T A LAML 57554369 + 57554349 57554389 41 AGTACAGTCACTACTTCAAGCACAGACCTGAACCATAAAAC AGTACAGTCACTACTTCAAGCACAGACCTGAACCAAAAAAC < 41bp 1 0.321078386081265 1 0.222618937492371 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554369 chr15:57554384 nonsynonymous SNV 0.999 2 36 hm5C_associated_SNPs_46714 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554384 57554384 1 + T A LAML 57554371 + 57554351 57554391 41 TACAGTCACTACTTCAAGCACAGACCTGAACCATAAAACAC TACAGTCACTACTTCAAGCACAGACCTGAACCAAAAAACAC < 41bp 1 0.134361762554516 1 0.155912965536118 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554371 chr15:57554384 nonsynonymous SNV 0.999 2 34 hm5C_associated_SNPs_46715 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554384 57554384 1 + T A LAML 57554381 + 57554361 57554401 41 ACTTCAAGCACAGACCTGAACCATAAAACACAAGAAAATTA ACTTCAAGCACAGACCTGAACCAAAAAACACAAGAAAATTA < 41bp 1 0.235002248299787 1 0.179128795862198 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554381 chr15:57554384 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_46716 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554384 57554384 1 + T A LAML 57554382 + 57554362 57554402 41 CTTCAAGCACAGACCTGAACCATAAAACACAAGAAAATTAT CTTCAAGCACAGACCTGAACCAAAAAACACAAGAAAATTAT < 41bp 1 0.389510621043952 1 0.552334547042847 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554382 chr15:57554384 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_46717 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr15 57554384 57554384 1 + T A LAML 57554389 + 57554369 57554409 41 CACAGACCTGAACCATAAAACACAAGAAAATTATAGAGGTA CACAGACCTGAACCAAAAAACACAAGAAAATTATAGAGGTA < 41bp 1 0.540756308095501 1 0.611500024795532 experiment 0.918487383808998 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control TCF12 ENSG00000140262 CDS Human protein_coding chr15:57554389 chr15:57554384 nonsynonymous SNV 0.999 2 16 hm5C_associated_SNPs_46718 0 0 3 GRWD1 POSTAR2 ENCODE chr15:57554321-57554399
64251 chr3 37340507 37340507 1 + T A LAML 37340497 + 37340477 37340517 41 TGGATGAAAGACTTCAAGAACTAGAAAAGATAAAGGTAAAA TGGATGAAAGACTTCAAGAACTAGAAAAGAAAAAGGTAAAA < 41bp 1 0.581951019148268 1 0.577243030071259 experiment 0.836097961703464 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37340497 chr3:37340507 nonsynonymous SNV 1.000 0 31 hm5C_associated_SNPs_46719 0 0 2 GRWD1 POSTAR2 ENCODE chr3:37340429-37340508
64251 chr7 100200147 100200147 1 + C T LAML 100200134 + 100200114 100200154 41 CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGCCCAGGGC CCCTCCTCACTGCCTGCGCCCTGCTGCCTTTTGTCCAGGGC < 41bp 1 0.273779220356739 1 0.132728427648544 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PCOLCE ENSG00000106333 CDS Human protein_coding chr7:100200134 chr7:100200147 nonsynonymous SNV 0.920 1 34 hm5C_associated_SNPs_46720 0 0 1 RPS3 POSTAR2 ENCODE chr7:100200037-100200172
64251 chr2 170471230 170471230 1 + T A LAML 170471216 + 170471196 170471236 41 GGATACTCAGTTGTGGAGAGCTGATTCCCAAATCTAAAGGT GGATACTCAGTTGTGGAGAGCTGATTCCCAAATCAAAAGGT < 41bp 1 0.329971293227451 1 0.232607901096344 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control PPIG ENSG00000138398 CDS Human protein_coding chr2:170471216 chr2:170471230 synonymous SNV . 0 35 hm5C_associated_SNPs_46721 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:170471218-170471241
64251 chr16 67915638 67915638 1 + G T LAML 67915625 + 67915605 67915645 41 TTTGGCAACAGCAGAGAGAGCTGGCAGAGCTGCGGCACAGC TTTGGCAACAGCAGAGAGAGCTGGCAGAGCTGCTGCACAGC < 41bp 1 0.470796271382578 1 0.232874602079391 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915625 chr16:67915638 nonsynonymous SNV 0.819 0 34 hm5C_associated_SNPs_46722 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67915618-67915649
64251 chr16 67915638 67915638 1 + G T LAML 67915640 + 67915620 67915660 41 GAGAGCTGGCAGAGCTGCGGCACAGCCAGGAAGAGCTGCTG GAGAGCTGGCAGAGCTGCTGCACAGCCAGGAAGAGCTGCTG < 41bp 1 0.462796610360034 1 0.148676097393036 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915640 chr16:67915638 nonsynonymous SNV 0.819 0 19 hm5C_associated_SNPs_46723 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67915618-67915649
64251 chr17 46133853 46133853 1 + G A LAML 46133838 + 46133818 46133858 41 ATAGTCACCGCCAGAAGGAGCAGGATGTGGAGAAGGAGCTG ATAGTCACCGCCAGAAGGAGCAGGATGTGGAGAAGAAGCTG < 41bp 1 0.793937207075525 1 0.693584680557251 experiment 0.412125585848951 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133838 chr17:46133853 nonsynonymous SNV 0.988 0 36 hm5C_associated_SNPs_46732 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr17 46133853 46133853 1 + G A LAML 46133859 + 46133839 46133879 41 AGGATGTGGAGAAGGAGCTGCGAGATGGAGGCGAGCAGGAC AGGATGTGGAGAAGAAGCTGCGAGATGGAGGCGAGCAGGAC < 41bp 1 0.777583993803614 1 0.625565111637115 experiment 0.444832012392772 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133859 chr17:46133853 nonsynonymous SNV 0.988 0 15 hm5C_associated_SNPs_46733 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr6 168265394 168265394 1 + A T LAML 168265414 + 168265394 168265434 41 AGTATTCACTCTATGAAGTGCATGTCAGCGGAGGTCAGTGT TGTATTCACTCTATGAAGTGCATGTCAGCGGAGGTCAGTGT < 41bp 1 0.0863117761446237 1 0.0155148506164551 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control AFDN ENSG00000130396 CDS Human protein_coding chr6:168265414 chr6:168265394 nonsynonymous SNV 0.985 3 1 hm5C_associated_SNPs_46734 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168265378-168265412
64251 chr11 32953888 32953888 1 + T A LAML 32953900 + 32953880 32953920 41 AGTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAG AGTCATCTATATCCTGTAGCCCAATTGGAGATTCCACTCAG < 41bp 1 0.23263395070382 1 0.198721557855606 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953900 chr11:32953888 nonsynonymous SNV 0.999 1 9 hm5C_associated_SNPs_46735 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr11 32953888 32953888 1 + T A LAML 32953901 + 32953881 32953921 41 GTCATCTTTATCCTGTAGCCCAATTGGAGATTCCACTCAGG GTCATCTATATCCTGTAGCCCAATTGGAGATTCCACTCAGG < 41bp 1 0.103070777169769 1 0.11656054854393 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control QSER1 ENSG00000060749 CDS Human protein_coding chr11:32953901 chr11:32953888 nonsynonymous SNV 0.999 1 8 hm5C_associated_SNPs_46736 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32953847-32953914
64251 chr11 31392353 31392353 1 + C A LAML 31392369 + 31392349 31392389 41 AGACCCATCTGCAAATATATCAGACCTAAAACAAAAATATC AGACACATCTGCAAATATATCAGACCTAAAACAAAAATATC < 41bp 1 0.347079464558493 1 0.208966732025146 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control DNAJC24 ENSG00000170946 CDS Human protein_coding chr11:31392369 chr11:31392353 nonsynonymous SNV 0.996 3 5 hm5C_associated_SNPs_46737 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:31392326-31392354
64251 chrX 47063063 47063063 1 + C T LAML 47063072 + 47063052 47063092 41 CAAATCTGAATCGACAGTTTCTTTTCCGGCCCTGGGATGTC CAAATCTGAATTGACAGTTTCTTTTCCGGCCCTGGGATGTC < 41bp 1 0.0309941265320563 1 0.0192440450191498 experiment 1 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control UBA1 ENSG00000130985 CDS Human protein_coding chrX:47063072 chrX:47063063 stopgain 0.997 1 12 hm5C_associated_SNPs_46738 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:47062956-47063077
64251 chr14 73576082 73576082 1 + G T LAML 73576075 + 73576055 73576095 41 GTGCTCTTCAGAAAAGGTTGCGTGATAGAGAAAAGGAAATG GTGCTCTTCAGAAAAGGTTGCGTGATATAGAAAAGGAAATG < 41bp 1 0.417024961144436 1 0.236188590526581 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control RBM25 ENSG00000119707 CDS Human protein_coding chr14:73576075 chr14:73576082 nonsynonymous SNV 1.000 3 28 hm5C_associated_SNPs_46739 0 0 23 TARDBP POSTAR2 DRA001158,DRS012387 chr14:73576057-73576142
64251 chr19 54652149 54652149 1 + G C LAML 54652142 + 54652122 54652162 41 AGCTCCCAGTGGGCCCAGCACGACCCAGCCCCGGCCCCCCA AGCTCCCAGTGGGCCCAGCACGACCCACCCCCGGCCCCCCA < 41bp 1 0.593816580109077 1 0.74440735578537 experiment 0.812366839781846 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652142 chr19:54652149 nonsynonymous SNV 0.982 1 28 hm5C_associated_SNPs_46742 0 0 2 HNRNPK POSTAR2 ENCODE chr19:54652060-54652199
64251 chr20 30898672 30898672 1 + G A LAML 30898670 + 30898650 30898690 41 AATTCCAGGAAGAGATTGCTCGGCTCAAGGCCCAGCTGGAA AATTCCAGGAAGAGATTGCTCGACTCAAGGCCCAGCTGGAA < 41bp 1 0.495540290073834 1 0.500047445297241 experiment 1 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control KIF3B ENSG00000101350 CDS Human protein_coding chr20:30898670 chr20:30898672 synonymous SNV . 0 23 hm5C_associated_SNPs_46743 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:30898663-30898687
64251 chr17 38318113 38318113 1 + G A LAML 38318128 + 38318108 38318148 41 GAAAAGCCTGACACCAAAAGCACTGTGACTGGAGAGAGGCA GAAAAACCTGACACCAAAAGCACTGTGACTGGAGAGAGGCA < 41bp 1 0.277665123411632 1 0.205016165971756 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318128 chr17:38318113 synonymous SNV . 0 6 hm5C_associated_SNPs_46745 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318024-38318113
64251 chr12 110765491 110765491 1 + A T LAML 110765502 + 110765482 110765522 41 AACTAGATGAATTTGGGGAACAGCTTTCCAAAGTCATCTCC AACTAGATGTATTTGGGGAACAGCTTTCCAAAGTCATCTCC < 41bp 1 0.362029744635907 1 0.214482694864273 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110765502 chr12:110765491 nonsynonymous SNV 1.000 3 10 hm5C_associated_SNPs_46746 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110765398-110765647
64251 chr1 45218810 45218810 1 + C G LAML 45218818 + 45218798 45218838 41 CTACAGCTGCCCCCACTAGGCCTTCCTGCCCTGCAGTGGCT CTACAGCTGCCCGCACTAGGCCTTCCTGCCCTGCAGTGGCT < 41bp 1 0.0275065329254985 1 0.0463577508926392 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218818 chr1:45218810 nonsynonymous SNV 0.019 0 13 hm5C_associated_SNPs_46747 0 0 4 BUD13 POSTAR2 ENCODE chr1:45218809-45218828
64251 chr1 45218810 45218810 1 + C G LAML 45218822 + 45218802 45218842 41 AGCTGCCCCCACTAGGCCTTCCTGCCCTGCAGTGGCTGAAA AGCTGCCCGCACTAGGCCTTCCTGCCCTGCAGTGGCTGAAA < 41bp 1 0.0802475633335019 1 0.104266464710236 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control KIF2C ENSG00000142945 CDS Human protein_coding chr1:45218822 chr1:45218810 nonsynonymous SNV 0.019 0 9 hm5C_associated_SNPs_46748 0 0 4 BUD13 POSTAR2 ENCODE chr1:45218809-45218828
64251 chr12 57892312 57892312 1 + T C LAML 57892311 + 57892291 57892331 41 GGACTAACCCCCCAGGAGATCTGCGACAAGTACCACATCAT GGACTAACCCCCCAGGAGATCCGCGACAAGTACCACATCAT < 41bp 1 0.366220512026379 1 0.34752094745636 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74773;RNA-BisSeq;Huh7;Control|28418038;GSE74774;RNA-BisSeq;MRC-5;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control MARS ENSG00000166986 CDS Human protein_coding chr12:57892311 chr12:57892312 nonsynonymous SNV 0.841 4 22 hm5C_associated_SNPs_46752 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57892236-57892339
64251 chr17 46133907 46133907 1 + C A LAML 46133913 + 46133893 46133933 41 AGGGCGCGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGA AGGGCGCGGAAGCTATGGCACGGAACCTGCTAGTGGATGGA < 41bp 1 0.690942139394317 1 0.596982419490814 experiment 0.618115721211366 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133913 chr17:46133907 nonsynonymous SNV 0.981 3 15 hm5C_associated_SNPs_46754 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr17 46133907 46133907 1 + C A LAML 46133918 + 46133898 46133938 41 GCGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGAGAGAC GCGGAAGCTATGGCACGGAACCTGCTAGTGGATGGAGAGAC < 41bp 1 0.12763982229264 1 0.297221779823303 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133918 chr17:46133907 nonsynonymous SNV 0.981 3 10 hm5C_associated_SNPs_46755 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr17 46133907 46133907 1 + C A LAML 46133919 + 46133899 46133939 41 CGGAAGCTCTGGCACGGAACCTGCTAGTGGATGGAGAGACT CGGAAGCTATGGCACGGAACCTGCTAGTGGATGGAGAGACT < 41bp 1 0.448944117699554 1 0.111960202455521 experiment 1 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133919 chr17:46133907 nonsynonymous SNV 0.981 3 9 hm5C_associated_SNPs_46756 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr3 155629049 155629049 1 + G A LAML 155629040 + 155629020 155629060 41 AGCCAGTCTGTTGAAGAGGCCCTCAAAAAGCTTGGAATTCA AGCCAGTCTGTTGAAGAGGCCCTCAAAAAACTTGGAATTCA < 41bp 1 0.120236107820118 1 0.0672035813331604 experiment 1 Functional Loss 28418038;GSE74771;RNA-BisSeq;293T;Control|28418038;GSE74772;RNA-BisSeq;HCT116;Control GMPS ENSG00000163655 CDS Human protein_coding chr3:155629040 chr3:155629049 synonymous SNV . 0 30 hm5C_associated_SNPs_46757 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155629005-155629070
64251 chr3 38287621 38287621 1 + C T LAML 38287619 + 38287599 38287639 41 CTCCAAGTTCCAGAACAGATCTCTGCTCATCTACCTCAGCC CTCCAAGTTCCAGAACAGATCTTTGCTCATCTACCTCAGCC < 41bp 1 0.204778615427623 1 0.0239401757717133 experiment 1 Functional Loss 28418038;GSE74773;RNA-BisSeq;Huh7;Control OXSR1 ENSG00000172939 CDS Human protein_coding chr3:38287619 chr3:38287621 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_46759 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:38287618-38287650
64251 chr1 109772148 109772148 1 + A G LAML 109772129 + 109772109 109772149 41 GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGAG GGATAAAGTTGGAAGCAGAGCGGTTTGAGAACCTCCGAGGG < 41bp 1 0.575033244198599 1 0.385469138622284 experiment 0.849933511602802 Functional Loss 30526041;GSE122413;RNA-BisSeq;HEK293;Control SARS ENSG00000031698 CDS Human protein_coding chr1:109772129 chr1:109772148 nonsynonymous SNV 0.994 1 40 hm5C_associated_SNPs_46774 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 62330253 62330253 1 + G A LAML 62330248 + 62330228 62330268 41 GAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCA GAGTCTCAAGAGGCAAGAACCGGGAAGACTGTCTATTCCCA < 41bp 1 0.792532751166486 1 0.91205358505249 experiment 0.414934497667029 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control PATJ ENSG00000132849 CDS Human protein_coding chr1:62330248 chr1:62330253 nonsynonymous SNV 0.005 0 26 hm5C_associated_SNPs_46775 0 0 3 BUD13 POSTAR2 ENCODE chr1:62330246-62330294
64251 chr5 7885830 7885830 1 + A T LAML 7885818 + 7885798 7885838 41 TTTGGCTCTTCTCTAGAATACAGACTTTTCCTATCAGCCTG TTTGGCTCTTCTCTAGAATACAGACTTTTCCTTTCAGCCTG < 41bp 1 0.424826087235059 1 0.311278820037842 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885818 chr5:7885830 nonsynonymous SNV 0.996 1 33 hm5C_associated_SNPs_46776 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885830 7885830 1 + A T LAML 7885822 + 7885802 7885842 41 GCTCTTCTCTAGAATACAGACTTTTCCTATCAGCCTGGAGA GCTCTTCTCTAGAATACAGACTTTTCCTTTCAGCCTGGAGA < 41bp 1 0.0398022315148243 1 0.0267396867275238 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885822 chr5:7885830 nonsynonymous SNV 0.996 1 29 hm5C_associated_SNPs_46777 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885830 7885830 1 + A T LAML 7885828 + 7885808 7885848 41 CTCTAGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTT CTCTAGAATACAGACTTTTCCTTTCAGCCTGGAGATGCCTT < 41bp 1 0.0536852524873307 1 0.0900717973709106 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885828 chr5:7885830 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_46778 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885830 7885830 1 + A T LAML 7885832 + 7885812 7885852 41 AGAATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGC AGAATACAGACTTTTCCTTTCAGCCTGGAGATGCCTTCAGC < 41bp 1 0.387723262089341 1 0.237009227275848 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885832 chr5:7885830 nonsynonymous SNV 0.996 1 19 hm5C_associated_SNPs_46779 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr5 7885830 7885830 1 + A T LAML 7885835 + 7885815 7885855 41 ATACAGACTTTTCCTATCAGCCTGGAGATGCCTTCAGCGTG ATACAGACTTTTCCTTTCAGCCTGGAGATGCCTTCAGCGTG < 41bp 1 0.242933286693395 1 0.248867362737656 experiment 1 Functional Loss 31358969;GSE133672;RNA-BisSeq;T24;Control MTRR ENSG00000124275 CDS Human protein_coding chr5:7885835 chr5:7885830 nonsynonymous SNV 0.996 1 16 hm5C_associated_SNPs_46780 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr5:7885825-7885864
64251 chr6 126210531 126210531 1 + C T LAML 126210539 + 126210519 126210559 41 TTTCTCTTGACCCAGAGGAACGAAAGAAAGCTGAGTCACAA TTTCTCTTGACCTAGAGGAACGAAAGAAAGCTGAGTCACAA < 41bp 1 0.5599240529588 1 0.415461242198944 experiment 0.880151894082401 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control|28418038;GSE74775;RNA-BisSeq;SNB19;Control NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126210539 chr6:126210531 nonsynonymous SNV 0.242 0 13 hm5C_associated_SNPs_46781 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:126210509-126210542
64251 chr6 30866769 30866769 1 + G A LAML 30866775 + 30866755 30866795 41 CTCACCGACGAGCAGGTCATCGAGAACGCGGGGGAGTTCTT CTCACCGACGAGCAAGTCATCGAGAACGCGGGGGAGTTCTT < 41bp 1 0.788896506723447 1 0.742699146270752 experiment 0.422206986553107 Functional Loss 31061524;GSE122265;BS-seq with improved protocol;Lung;Control DDR1 ENSG00000204580 CDS Human protein_coding chr6:30866775 chr6:30866769 synonymous SNV . 0 15 hm5C_associated_SNPs_46783 0 0 1 METAP2 POSTAR2 ENCODE chr6:30866767-30866815
64251 chr15 69718696 69718696 1 + C T LAML 69718677 + 69718657 69718697 41 ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGACGTATTGCT ATTTCTCTGTTGTCCTAGGCCAGAAAAAGAGACGTATTGTT < 41bp 1 0.563264403059581 1 0.556152164936066 experiment 0.873471193880839 Functional Loss 28418038;GSE74774;RNA-BisSeq;MRC-5;Control KIF23 ENSG00000137807 CDS Human protein_coding chr15:69718677 chr15:69718696 nonsynonymous SNV 0.998 4 40 hm5C_associated_SNPs_46784 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:69718695-69718733
64251 chr20 21312450 21312450 1 + G T LAML 21312451 + 21312431 21312471 41 TCATCATTGTTTATGTGGAGCAGATGGTAAGTTTCTTCTTT TCATCATTGTTTATGTGGATCAGATGGTAAGTTTCTTCTTT < 41bp 1 0.298114852853941 1 0.16995033621788 experiment 1 Functional Loss 28418038;GSE74772;RNA-BisSeq;HCT116;Control XRN2 ENSG00000088930 CDS Human protein_coding chr20:21312451 chr20:21312450 nonsynonymous SNV 1.000 3 20 hm5C_associated_SNPs_46786 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:21312413-21312452
64251 chr7 56136249 56136249 1 + A G LAML 56136260 + 56136240 56136280 41 CCAGACAGCAGAGATGGTGACGGGCCTGTGCGGGAGGCGAC CCAGACAGCGGAGATGGTGACGGGCCTGTGCGGGAGGCGAC < 41bp 1 0.662198921980458 1 0.671773910522461 experiment 0.675602156039083 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient|28418038;GSE93752;RNA-BisSeq;HeLa;Control SUMF2 ENSG00000129103 CDS Human protein_coding chr7:56136260 chr7:56136249 nonsynonymous SNV 1.000 2 10 hm5C_associated_SNPs_46787 0 0 5 LIN28A POSTAR2 GSE39873,GSM980594 chr7:56136249-56136270
64251 chr18 33785204 33785204 1 + C T LAML 33785184 + 33785164 33785204 41 CAGCCCTGAGGTTCAGGGCCCAATCATCAATTTTAATGTGC CAGCCCTGAGGTTCAGGGCCCAATCATCAATTTTAATGTGT < 41bp 1 0.0316105530815744 1 0.0229431688785553 experiment 1 Functional Loss 22344696;NO;bisulfite sequencing;HeLa;Control MOCOS ENSG00000075643 CDS Human protein_coding chr18:33785184 chr18:33785204 synonymous SNV . 0 41 hm5C_associated_SNPs_46790 0 0 1 CDC40 POSTAR2 ENCODE chr18:33785201-33785286
64251 chr8 25167988 25167988 1 + T A LAML 25168004 + 25167984 25168024 41 ACACTTGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG ACACATGGTTGATAGATCAACAGCAATAGCCCGGAAGATGG < 41bp 1 0.599321410862293 1 0.35824254155159 experiment 0.801357178275415 Functional Loss 28418038;GSE74775;RNA-BisSeq;SNB19;Control DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25168004 chr8:25167988 nonsynonymous SNV 0.996 3 5 hm5C_associated_SNPs_46793 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003587 chr8:25167973-25167994
64251 chr1 16257992 16257992 1 + C T LAML 16257979 + 16257959 16257999 41 TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGCCTGACAG TTTTCCCAGGCAGAGAGCAACGTAGATCCAGAGTCTGACAG < 41bp 1 0.230160739868739 1 0.0624575316905975 experiment 1 Functional Loss 28418038;GSE93751;RNA-BisSeq;HeLa;NSUN2 deficient SPEN ENSG00000065526 CDS Human protein_coding chr1:16257979 chr1:16257992 nonsynonymous SNV 0.008 3 34 hm5C_associated_SNPs_46794 0 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16257920-16258020
64251 chr13 114202762 114202762 1 + C T BRCA 114202762 + 114202742 114202782 41 GAAGAGCGGGCGTCATCTCTCGGGAGGTGAGTGGCTTCCCC GAAGAGCGGGCGTCATCTCTTGGGAGGTGAGTGGCTTCCCC Direct Loss 0.992066417294592 0 0.95954716 0.93735886 prediction 0.984132834589184 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114202762 chr13:114202762 nonsynonymous SNV 0.935 4 21 hm5C_associated_SNPs_46799 0 0 5 PPIG POSTAR2 ENCODE chr13:114202715-114202770
64251 chr1 76262729 76262729 1 + C G LUAD 76262729 + 76262709 76262749 41 CCCGGCGGTTTCCCCGTCGTCGGGAGAAACCCGCTCACCTC CCCGGCGGTTTCCCCGTCGTGGGGAGAAACCCGCTCACCTC Direct Loss 0.990263775160639 0 0.92562765 0.90204453 prediction 0.980527550321279 Functional Loss - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76262729 chr1:76262729 nonsynonymous SNV 0.000 2 21 hm5C_associated_SNPs_46804 0 0 1 XPO5 POSTAR2 ENCODE chr1:76262666-76262742
64251 chr11 34937813 34937813 1 - G A rs2956114 34937813 - 34937793 34937833 41 CCATGTCTGGCTGTGATGCTCGGGAGGGAGACTGTTGTTCC CCATGTCTGGCTGTGATGCTTGGGAGGGAGACTGTTGTTCC Direct Loss 0.989941656927402 0 0.931221 0.84175146 prediction 0.979883313854804 Functional Loss - APIP ENSG00000149089 CDS Human protein_coding chr11:34937813 chr11:34937813 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_46805 1 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:34937800-34937820
64251 chr7 42977090 42977090 1 + C T UCEC 42977090 + 42977070 42977110 41 AGAGACTGTGGTGCTGTACACGGGAGAGACACCGTCTGAAC AGAGACTGTGGTGCTGTACATGGGAGAGACACCGTCTGAAC Direct Loss 0.989382853953572 0 0.90061396 0.5344479 prediction 0.978765707907143 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42977090 chr7:42977090 nonsynonymous SNV 0.955 1 21 hm5C_associated_SNPs_46812 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr7:42977080-42977101
64251 chr15 43426123 43426123 1 + C G rs573311291 43426123 + 43426103 43426143 41 CTGCCGCGCCCCGCGCCCCCCAGGAGGCCGCACCCTGCGCC CTGCCGCGCCCCGCGCCCCCGAGGAGGCCGCACCCTGCGCC Direct Loss 0.989269045328455 0 0.9127227 0.90353155 prediction 0.978538090656911 Functional Loss - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43426123 chr15:43426123 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_46813 0 0 3 DDX3X POSTAR2 ENCODE chr15:43426076-43426142
64251 chr11 1977651 1977651 1 + C A rs116624254 1977651 + 1977631 1977671 41 CCAGCTGGTTCGGGCTGTGACGGGGTGGCCAGCAGGGACGC CCAGCTGGTTCGGGCTGTGAAGGGGTGGCCAGCAGGGACGC Direct Loss 0.989107786593074 0 0.92758507 0.8925444 prediction 0.978215573186148 Functional Loss - MRPL23 ENSG00000214026 UTR3 Human protein_coding chr11:1977651 chr11:1977651 . . 0 21 hm5C_associated_SNPs_46816 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:1977638-1977662
64251 chr11 118402921 118402921 1 + C T UCEC 118402921 + 118402901 118402941 41 CCTGGGCTGAGCGGGCACTTCGGGAGAATGAACGCCACGCC CCTGGGCTGAGCGGGCACTTTGGGAGAATGAACGCCACGCC Direct Loss 0.989065647766632 0 0.9249209 0.9162731 prediction 0.978131295533264 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118402921 chr11:118402921 nonsynonymous SNV 0.052 4 21 hm5C_associated_SNPs_46817 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:118402889-118402926
64251 chr3 157155647 157155647 1 + C T rs112277608 157155647 + 157155627 157155667 41 GCTAGAGGAGCTGCGGCAGACGCGAGCCGACCTGCACGCGG GCTAGAGGAGCTGCGGCAGATGCGAGCCGACCTGCACGCGG Direct Loss 0.988383422978257 0 0.8362474 0.7218811 prediction 0.976766845956515 Functional Loss - PTX3 ENSG00000163661 CDS Human protein_coding chr3:157155647 chr3:157155647 nonsynonymous SNV 0.581 1 21 hm5C_associated_SNPs_46825 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:157155647-157155648
64251 chr15 44829415 44829415 1 + C G TGCT 44829415 + 44829395 44829435 41 GGCGGCGGCGGCGGCGGCGGCGGGGGACTCGGACTCCTGGG GGCGGCGGCGGCGGCGGCGGGGGGGGACTCGGACTCCTGGG Direct Loss 0.988146885725435 0 0.93747044 0.932057 prediction 0.976293771450871 Functional Loss - EIF3J ENSG00000104131 CDS Human protein_coding chr15:44829415 chr15:44829415 nonsynonymous SNV 0.993 0 21 hm5C_associated_SNPs_46827 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:44829392-44829424
64251 chr1 156028127 156028127 1 + C A KIRC 156028127 + 156028107 156028147 41 CCCAGGCTTTGGTGCAGTACCTGGAGGAGCCCCTCACCCAA CCCAGGCTTTGGTGCAGTACATGGAGGAGCCCCTCACCCAA Direct Loss 0.988047693352361 0 0.89530694 0.8622373 prediction 0.976095386704721 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156028127 chr1:156028127 nonsynonymous SNV 0.995 3 21 hm5C_associated_SNPs_46828 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:156028103-156028129
64251 chr22 38864307 38864307 1 + C G BLCA 38864307 + 38864287 38864327 41 ATCTTGCTGCTGGGGAAGATCTGGAGGTCCAAGTGCTGCAA ATCTTGCTGCTGGGGAAGATGTGGAGGTCCAAGTGCTGCAA Direct Loss 0.987760359730258 0 0.90357304 0.9006206 prediction 0.975520719460515 Functional Loss - KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38864307 chr22:38864307 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_46831 0 0 5 DDX3X POSTAR2 ENCODE chr22:38864275-38864329
64251 chr15 44829571 44829571 1 + C T TGCT 44829571 + 44829551 44829591 41 GTGCGGAAGGTGGGGGGCGGCGGCACTGCCGGCGGGGACCG GTGCGGAAGGTGGGGGGCGGTGGCACTGCCGGCGGGGACCG Direct Loss 0.987747830903681 0 0.89911187 0.87768674 prediction 0.975495661807363 Functional Loss - EIF3J ENSG00000104131 CDS Human protein_coding chr15:44829571 chr15:44829571 synonymous SNV . 0 21 hm5C_associated_SNPs_46832 0 0 11 DDX3X POSTAR2 ENCODE chr15:44829519-44829620
64251 chr4 174292541 174292541 1 + C A LUSC 174292541 + 174292521 174292561 41 CCGGGCAACTGTGCTGCCTGCGGGAGGATGGTGAGCGGTGC CCGGGCAACTGTGCTGCCTGAGGGAGGATGGTGAGCGGTGC Direct Loss 0.987373875528864 0 0.88206726 0.801388 prediction 0.974747751057728 Functional Loss - SAP30 ENSG00000164105 CDS Human protein_coding chr4:174292541 chr4:174292541 synonymous SNV . 0 21 hm5C_associated_SNPs_46836 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:174292534-174292553
64251 chr2 224822340 224822340 1 + C T LUAD 224822340 + 224822320 224822360 41 AGTTAGAGCGGCAGCGCCTTCTGCGGTGCCCGCCGCCGCCC AGTTAGAGCGGCAGCGCCTTTTGCGGTGCCCGCCGCCGCCC Direct Loss 0.987321598124226 0 0.55952376 0.6655483 prediction 0.974643196248452 Functional Loss - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224822340 chr2:224822340 synonymous SNV . 0 21 hm5C_associated_SNPs_46837 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:224822323-224822351
64251 chr19 34303788 34303788 1 + C T COAD 34303788 + 34303768 34303808 41 TCAGCGAGTATGTGCTTTGCCGGGAGGAGCGGCGGCCGCAG TCAGCGAGTATGTGCTTTGCTGGGAGGAGCGGCGGCCGCAG Direct Loss 0.987048044178036 0 0.90475833 0.7682271 prediction 0.974096088356072 Functional Loss - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34303788 chr19:34303788 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_46841 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:34303775-34303821
64251 chr4 16228443 16228443 1 + C T rs573491053 16228443 + 16228423 16228463 41 GGGACCCGGCAGGAGCGGGCCGGGGATGGCGGCGGCGGGCG GGGACCCGGCAGGAGCGGGCTGGGGATGGCGGCGGCGGGCG Direct Loss 0.986788077677914 0 0.9264009 0.9127575 prediction 0.973576155355828 Functional Loss - TAPT1-AS1 ENSG00000263327 ncRNA_exonic Human antisense chr4:16228443 chr4:16228443 . . 0 21 hm5C_associated_SNPs_46843 0 0 1 XRN2 POSTAR2 ENCODE chr4:16228400-16228489
64251 chr1 155708115 155708115 1 + C G rs551652434 155708115 + 155708095 155708135 41 TGAGGAAGTCGGGCAGTACACAGGAAGAGGAGCCAGGCCCT TGAGGAAGTCGGGCAGTACAGAGGAAGAGGAGCCAGGCCCT Direct Loss 0.986215852553853 0 0.86608267 0.864128 prediction 0.972431705107706 Functional Loss - DAP3 ENSG00000203761 ncRNA_intronic Human unprocessed_pseudogene chr1:155708115 chr1:155708115 . . 0 21 hm5C_associated_SNPs_46848 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:155708044-155708130
64251 chr6 42989434 42989434 1 + C A rs564567932 42989434 + 42989414 42989454 41 GCCGGGGCCGGGGCCGGGGCCGGGGCCCGACGTCCCCGCGG GCCGGGGCCGGGGCCGGGGCAGGGGCCCGACGTCCCCGCGG Direct Loss 0.98614335802319 0 0.92904043 0.9116093 prediction 0.97228671604638 Functional Loss - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42989434 chr6:42989434 synonymous SNV . 0 21 hm5C_associated_SNPs_46850 0 0 4 DDX3X POSTAR2 ENCODE chr6:42989387-42989451
64251 chr2 24272645 24272645 1 + C T rs116520786 24272645 + 24272625 24272665 41 GAGGCGAGCCGGAGCGACGGCGGGGCTGGGGCCGGAGCCGA GAGGCGAGCCGGAGCGACGGTGGGGCTGGGGCCGGAGCCGA Direct Loss 0.986124624996033 0 0.8951442 0.8304832 prediction 0.972249249992065 Functional Loss - FKBP1B ENSG00000119782 UTR5 Human protein_coding chr2:24272645 chr2:24272645 . . 0 21 hm5C_associated_SNPs_46851 0 0 3 DDX3X POSTAR2 ENCODE chr2:24272630-24272746
64251 chr17 80674690 80674690 1 + C T BLCA 80674690 + 80674670 80674710 41 TGTCAGGGCCACGGGCCACTCGGGGGGCGGGTGCATCAGCC TGTCAGGGCCACGGGCCACTTGGGGGGCGGGTGCATCAGCC Direct Loss 0.985986053052232 0 0.93288743 0.912982 prediction 0.971972106104465 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80674690 chr17:80674690 nonsynonymous SNV 0.937 0 21 hm5C_associated_SNPs_46853 0 0 8 DDX3X POSTAR2 ENCODE chr17:80674599-80674727
64251 chr3 196295888 196295888 1 + C T rs576470291 196295888 + 196295868 196295908 41 GCCCCGGGGGCTGGGGCAGCCTCGGGCGGCGCTGGCTGTAG GCCCCGGGGGCTGGGGCAGCTTCGGGCGGCGCTGGCTGTAG Direct Loss 0.985872538991747 0 0.86739266 0.8905978 prediction 0.971745077983494 Functional Loss - FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196295888 chr3:196295888 synonymous SNV . 0 21 hm5C_associated_SNPs_46854 0 0 3 DDX3X POSTAR2 ENCODE chr3:196295867-196295895
64251 chr17 28706011 28706011 1 + C A rs181199485 28706011 + 28705991 28706031 41 GCTGGAAGATGGCGAGCGGCCGGGACGAGCGGCCGCCTTGG GCTGGAAGATGGCGAGCGGCAGGGACGAGCGGCCGCCTTGG Direct Loss 0.985809666273004 0 0.8998376 0.9017298 prediction 0.971619332546007 Functional Loss - CPD ENSG00000108582 CDS Human protein_coding chr17:28706011 chr17:28706011 synonymous SNV . 0 21 hm5C_associated_SNPs_46858 0 0 5 DDX3X POSTAR2 ENCODE chr17:28705966-28706043
64251 chr5 122181232 122181232 1 + C A rs142593222 122181232 + 122181212 122181252 41 TCGGGGCCCCGCGGGCGCAGCGGGGCGGGAGGCGGGGCGGC TCGGGGCCCCGCGGGCGCAGAGGGGCGGGAGGCGGGGCGGC Direct Loss 0.985591274959034 0 0.9255693 0.9190639 prediction 0.971182549918067 Functional Loss - SNX24 ENSG00000064652 UTR5 Human protein_coding chr5:122181232 chr5:122181232 . . 0 21 hm5C_associated_SNPs_46865 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:122181187-122181243
64251 chr6 116600780 116600780 1 - G T CESC 116600780 - 116600760 116600800 41 CAGAGGAGGGGGGCGTACCCCAGGATGCCGCGGGCCGTGGC CAGAGGAGGGGGGCGTACCCAAGGATGCCGCGGGCCGTGGC Direct Loss 0.985581662629696 0 0.8982041 0.8968588 prediction 0.971163325259393 Functional Loss - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600780 chr6:116600780 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_46866 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:116600740-116600780
64251 chr2 88991273 88991273 1 + C T LUSC 88991273 + 88991253 88991293 41 CGGGTCTTGGCCCCGCTGCCCGGGAGGGCCGGGGGCGCGGC CGGGTCTTGGCCCCGCTGCCTGGGAGGGCCGGGGGCGCGGC Direct Loss 0.985507840691809 0 0.92061675 0.8702791 prediction 0.971015681383618 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:88991273 chr2:88991273 synonymous SNV . 0 21 hm5C_associated_SNPs_46868 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:88991256-88991310
64251 chr9 32384709 32384709 1 + C T rs7854312 32384709 + 32384689 32384729 41 TGGGTCAGGTTCGCCGGTCGCGGGAGCCCCGCCGTGCAGTC TGGGTCAGGTTCGCCGGTCGTGGGAGCCCCGCCGTGCAGTC Direct Loss 0.985245666985128 0 0.9385574 0.91043425 prediction 0.970491333970256 Functional Loss - ACO1 ENSG00000122729 UTR5 Human protein_coding chr9:32384709 chr9:32384709 . . 0 21 hm5C_associated_SNPs_46871 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:32384672-32384724
64251 chr9 34251890 34251890 1 + C T rs540835668 34251890 + 34251870 34251910 41 GAGGGGCTGGGGAGATGGGGCGGGAGGGCCAGACTCAGTGC GAGGGGCTGGGGAGATGGGGTGGGAGGGCCAGACTCAGTGC Direct Loss 0.985131074395146 0 0.9077896 0.8760885 prediction 0.970262148790291 Functional Loss - UBAP1 ENSG00000165006 UTR3 Human protein_coding chr9:34251890 chr9:34251890 . . 0 21 hm5C_associated_SNPs_46873 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:34251884-34251912
64251 chr8 38034611 38034611 1 + C T BLCA 38034611 + 38034591 38034631 41 AGGCGATGGCTACTATCCCTCGGGAGGCGCCTGGCCAGAGC AGGCGATGGCTACTATCCCTTGGGAGGCGCCTGGCCAGAGC Direct Loss 0.985129751668708 0 0.93192804 0.8988668 prediction 0.970259503337415 Functional Loss - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38034611 chr8:38034611 nonsynonymous SNV 0.737 2 21 hm5C_associated_SNPs_46874 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:38034589-38034612
64251 chr19 15794469 15794469 1 + C T UCEC 15794469 + 15794449 15794489 41 ACTTCACAGACGCTGTCATCCGGGAGCGGCGTCGCACCCTC ACTTCACAGACGCTGTCATCTGGGAGCGGCGTCGCACCCTC Direct Loss 0.985034312473786 0 0.8895975 0.3958004 prediction 0.970068624947571 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15794469 chr19:15794469 nonsynonymous SNV 0.226 2 21 hm5C_associated_SNPs_46875 0 0 2 SND1 POSTAR2 ENCODE chr19:15794453-15794508
64251 chr21 45209442 45209442 1 + C G rs2276244 45209442 + 45209422 45209462 41 GGGCCAGGAGGAGGCGGGCGCAGGAGGCGCGTGCTCAGTGT GGGCCAGGAGGAGGCGGGCGGAGGAGGCGCGTGCTCAGTGT Direct Loss 0.984939030158188 0 0.94352937 0.9386287 prediction 0.969878060316376 Functional Loss - RRP1 ENSG00000160214 UTR5 Human protein_coding chr21:45209442 chr21:45209442 . . 0 21 hm5C_associated_SNPs_46877 0 0 1 LIN28B POSTAR2 ENCODE chr21:45209431-45209561
64251 chr2 187558968 187558968 1 + C A UCEC 187558968 + 187558948 187558988 41 GGCCGTGGTGCTGCTGAAAGCGCGGCTGGTCCCCGCGGCCG GGCCGTGGTGCTGCTGAAAGAGCGGCTGGTCCCCGCGGCCG Direct Loss 0.984885155701818 0 0.898875 0.8478197 prediction 0.969770311403636 Functional Loss - FAM171B ENSG00000144369 CDS Human protein_coding chr2:187558968 chr2:187558968 nonsynonymous SNV 0.997 0 21 hm5C_associated_SNPs_46878 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:187558963-187558992
64251 chr21 45563186 45563186 1 + C T UCEC 45563186 + 45563166 45563206 41 GGTGGCAAGTGGCCTTATGCCGGGACCGCAGAGGCCATCAA GGTGGCAAGTGGCCTTATGCTGGGACCGCAGAGGCCATCAA Direct Loss 0.984629374961499 0 0.9166472 0.8862587 prediction 0.969258749922999 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45563186 chr21:45563186 synonymous SNV . 0 21 hm5C_associated_SNPs_46885 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45563157-45563195
64251 chr15 43690268 43690268 1 + C T COAD 43690268 + 43690248 43690288 41 AGGCAAGAGAAGGGCCTTCTCGGGAAACTTCTCCCCGGGAA AGGCAAGAGAAGGGCCTTCTTGGGAAACTTCTCCCCGGGAA Direct Loss 0.984404958982379 0 0.90878 0.86634195 prediction 0.968809917964759 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43690268 chr15:43690268 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_46888 1 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:43690251-43690277
64251 chr1 202976569 202976569 1 + C T rs145403258 202976569 + 202976549 202976589 41 CGGAGCTGGCTTGCGGCTCCCGGGGCCGGCTCTCCGGCCGG CGGAGCTGGCTTGCGGCTCCTGGGGCCGGCTCTCCGGCCGG Direct Loss 0.984263962448592 0 0.9327642 0.89861894 prediction 0.968527924897184 Functional Loss - TMEM183A;TMEM183B ENSG00000163444 UTR5 Human protein_coding chr1:202976569 chr1:202976569 . . 0 21 hm5C_associated_SNPs_46893 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:202976553-202976585
64251 chrX 54836335 54836335 1 + C T LUSC 54836335 + 54836315 54836355 41 TCTCAAAGACCCCAGAGGCTCGGGAGGCACCTGCCACCCAG TCTCAAAGACCCCAGAGGCTTGGGAGGCACCTGCCACCCAG Direct Loss 0.98425352980049 0 0.9212214 0.83005786 prediction 0.968507059600979 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836335 chrX:54836335 nonsynonymous SNV 0.918 1 21 hm5C_associated_SNPs_46894 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:54836314-54836340
64251 chr20 45353912 45353912 1 + C T COAD 45353912 + 45353892 45353932 41 GGCAGGAAGCAAGCCATCCTCGGGAGCAACTTGGTGCTGCT GGCAGGAAGCAAGCCATCCTTGGGAGCAACTTGGTGCTGCT Direct Loss 0.984231171774653 0 0.93585396 0.8928254 prediction 0.968462343549305 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353912 chr20:45353912 synonymous SNV . 0 21 hm5C_associated_SNPs_46895 2 0 1 XPO5 POSTAR2 ENCODE chr20:45353899-45354017
64251 chr18 21083604 21083604 1 + C G rs143953070 21083604 + 21083584 21083624 41 TGGGCGAGGAGGACTACTATCTGGAGCTGTGCGAGCGGCCG TGGGCGAGGAGGACTACTATGTGGAGCTGTGCGAGCGGCCG Direct Loss 0.983975084419589 0 0.38255358 0.25506383 prediction 0.967950168839177 Functional Loss - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21083604 chr18:21083604 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_46901 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr18:21083583-21083626
64251 chr11 118889933 118889933 1 + C A LGG 118889933 + 118889913 118889953 41 GGAAAGAGGTGCTGGAGTATCTGGGTAACCCTGCTAATTAC GGAAAGAGGTGCTGGAGTATATGGGTAACCCTGCTAATTAC Direct Loss 0.983908738818619 0 0.85874474 0.44666854 prediction 0.967817477637237 Functional Loss - TRAPPC4 ENSG00000196655 CDS Human protein_coding chr11:118889933 chr11:118889933 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_46902 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:118889923-118889945
64251 chr12 56863200 56863200 1 + C T UCEC 56863200 + 56863180 56863220 41 CAGAGAAGGTGGGGCTGTTGCTGGAGTATGAGGCCCAGAAG CAGAGAAGGTGGGGCTGTTGTTGGAGTATGAGGCCCAGAAG Direct Loss 0.98381953014478 0 0.90196925 0.90319437 prediction 0.96763906028956 Functional Loss - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863200 chr12:56863200 synonymous SNV . 0 21 hm5C_associated_SNPs_46905 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56863185-56863222
64251 chrX 117861658 117861658 1 + C G MESO 117861658 + 117861638 117861678 41 CTGCTGCTCTGCGCCGGCGGCGGGGGCGGGGGCGGGGGCGC CTGCTGCTCTGCGCCGGCGGGGGGGGCGGGGGCGGGGGCGC Direct Loss 0.983680742881803 0 0.94085145 0.93788815 prediction 0.967361485763607 Functional Loss - IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117861658 chrX:117861658 synonymous SNV . 0 21 hm5C_associated_SNPs_46906 0 0 5 DDX3X POSTAR2 ENCODE chrX:117861591-117861689
64251 chrX 105855399 105855399 1 + C T COAD 105855399 + 105855379 105855419 41 GAGGAATCGGGCTGGGGTCCCGGGAGGGGTGATCCGAAGAG GAGGAATCGGGCTGGGGTCCTGGGAGGGGTGATCCGAAGAG Direct Loss 0.983675219602312 0 0.9094378 0.9072107 prediction 0.967350439204623 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855399 chrX:105855399 nonsynonymous SNV 0.874 0 21 hm5C_associated_SNPs_46907 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:105855383-105855402
64251 chr21 38390441 38390441 1 + C A rs542725845 38390441 + 38390421 38390461 41 TCCTCAGGAGGGGGTGACCACTGGGGGGAGGGTCCGCTCCC TCCTCAGGAGGGGGTGACCAATGGGGGGAGGGTCCGCTCCC Direct Loss 0.983635810754696 0 0.9329087 0.9348656 prediction 0.967271621509391 Functional Loss - RIPPLY3 ENSG00000183145 CDS Human protein_coding chr21:38390441 chr21:38390441 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_46908 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:38390415-38390451
64251 chr7 37960546 37960546 1 + C A STAD 37960546 + 37960526 37960566 41 GGGAAGGCTGACCGCGATGCCAGGACGCGCTCCCCTCCGCA GGGAAGGCTGACCGCGATGCAAGGACGCGCTCCCCTCCGCA Direct Loss 0.983584340605658 0 0.90816677 0.89297414 prediction 0.967168681211317 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960546 chr7:37960546 nonsynonymous SNV 0.005 1 21 hm5C_associated_SNPs_46910 0 0 6 DDX3X POSTAR2 ENCODE chr7:37960455-37960546
64251 chr11 70279300 70279300 1 + C T UCEC 70279300 + 70279280 70279320 41 GCATGGAGGCCGCTGACTACCGAGAGGCCAGCAGCCAGCAG GCATGGAGGCCGCTGACTACTGAGAGGCCAGCAGCCAGCAG Direct Loss 0.983557820850445 0 0.9361471 0.888041 prediction 0.96711564170089 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279300 chr11:70279300 stopgain 0.001 0 21 hm5C_associated_SNPs_46912 0 0 7 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:70279286-70279307
64251 chr15 72767217 72767217 1 + C T STAD 72767217 + 72767197 72767237 41 GCTCTGGGGCCCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG GCTCTGGGGCCCGGCGGTGGTGGCGGCGGCGGCGGCGGCGG Direct Loss 0.983531289185263 0 0.9140323 0.90537715 prediction 0.967062578370527 Functional Loss - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72767217 chr15:72767217 synonymous SNV . 0 21 hm5C_associated_SNPs_46915 0 0 4 DDX24 POSTAR2 ENCODE chr15:72767118-72767227
64251 chr3 57542432 57542432 1 + C T BLCA 57542432 + 57542412 57542452 41 TAGCGGCGGTGCGGCCTGTTCAGGGCCGGGGCCTGAGCCGG TAGCGGCGGTGCGGCCTGTTTAGGGCCGGGGCCTGAGCCGG Direct Loss 0.983480252983619 0 0.91607815 0.87965643 prediction 0.966960505967238 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542432 chr3:57542432 nonsynonymous SNV 0.084 0 21 hm5C_associated_SNPs_46917 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:57542431-57542432
64251 chr2 74687554 74687554 1 + C T CESC 74687554 + 74687534 74687574 41 ACCAGAGTGCCCCCCCTCATCAGGAGGGTGAGCCCGGGGCA ACCAGAGTGCCCCCCCTCATTAGGAGGGTGAGCCCGGGGCA Direct Loss 0.983251253321866 0 0.93424684 0.9090504 prediction 0.966502506643732 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687554 chr2:74687554 stopgain 0.961 0 21 hm5C_associated_SNPs_46921 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:74687551-74687580
64251 chr11 252841 252841 1 + C T rs3817635 252841 + 252821 252861 41 TCTCAGGGTCTTAGGTGATACGGGAGAGAAAGAACGTGCCA TCTCAGGGTCTTAGGTGATATGGGAGAGAAAGAACGTGCCA Direct Loss 0.983061419723017 0 0.814682 0.8491295 prediction 0.966122839446034 Functional Loss - PSMD13 ENSG00000185627 UTR3 Human protein_coding chr11:252841 chr11:252841 . . 0 21 hm5C_associated_SNPs_46923 0 0 14 DDX55 POSTAR2 ENCODE chr11:252811-252888
64251 chr16 72146635 72146635 1 + C T rs536082272 72146635 + 72146615 72146655 41 CCGAGGTGCTGCCGGGGCAGCGGGAGGTGGCTGGACCCATC CCGAGGTGCTGCCGGGGCAGTGGGAGGTGGCTGGACCCATC Direct Loss 0.982832892181402 0 0.902234 0.896407 prediction 0.965665784362803 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72146635 chr16:72146635 nonsynonymous SNV 0.014 0 21 hm5C_associated_SNPs_46928 0 0 2 LARP4 POSTAR2 ENCODE chr16:72146608-72146654
64251 chr1 110882488 110882488 1 + C T OV 110882488 + 110882468 110882508 41 AGGCGGGGAGTCACGTTCCTCTGGGGCCGCCTCCTCAGCTC AGGCGGGGAGTCACGTTCCTTTGGGGCCGCCTCCTCAGCTC Direct Loss 0.982825659409056 0 0.92665505 0.9126905 prediction 0.965651318818111 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882488 chr1:110882488 nonsynonymous SNV 0.992 1 21 hm5C_associated_SNPs_46929 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:110882488-110882489
64251 chrX 51486790 51486790 1 + C T rs147103223 51486790 + 51486770 51486810 41 CCAGGTGGACATGGAATCCCCGGGGTCGGCCCCGAGCGGGG CCAGGTGGACATGGAATCCCTGGGGTCGGCCCCGAGCGGGG Direct Loss 0.982711632813668 0 0.9064553 0.8134935 prediction 0.965423265627335 Functional Loss - GSPT2 ENSG00000189369 CDS Human protein_coding chrX:51486790 chrX:51486790 nonsynonymous SNV 0.679 1 21 hm5C_associated_SNPs_46933 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:51486784-51486805
64251 chr16 2732597 2732597 1 + C T CESC 2732597 + 2732577 2732617 41 TCGCCGGCCCGGGGCGGCATCGGGGCGGGGCTGGGGGGCGG TCGCCGGCCCGGGGCGGCATTGGGGCGGGGCTGGGGGGCGG Direct Loss 0.982656813176235 0 0.93718964 0.91699874 prediction 0.96531362635247 Functional Loss - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2732597 chr16:2732597 synonymous SNV . 0 21 hm5C_associated_SNPs_46936 0 0 5 DDX3X POSTAR2 ENCODE chr16:2732542-2732617
64251 chr13 46039243 46039243 1 + C G UCEC 46039243 + 46039223 46039263 41 GCTAGGGAAAAGCTGGCTCTCTGGGATCGGAGACCGGACAC GCTAGGGAAAAGCTGGCTCTGTGGGATCGGAGACCGGACAC Direct Loss 0.982614531435905 0 0.85474145 0.3134476 prediction 0.96522906287181 Functional Loss - COG3 ENSG00000136152 CDS Human protein_coding chr13:46039243 chr13:46039243 synonymous SNV . 0 21 hm5C_associated_SNPs_46937 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr13:46039229-46039249
64251 chrX 129546778 129546778 1 + C T UCEC 129546778 + 129546758 129546798 41 ATAAAAGGGCCCGACGCTCCCGGGAGCGGGAGTCTTCGAAT ATAAAAGGGCCCGACGCTCCTGGGAGCGGGAGTCTTCGAAT Direct Loss 0.982550524239328 0 0.9420513 0.9175558 prediction 0.965101048478656 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546778 chrX:129546778 nonsynonymous SNV 0.115 0 21 hm5C_associated_SNPs_46938 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:129546684-129546848
64251 chr11 70281715 70281715 1 + C A UCEC 70281715 + 70281695 70281735 41 TCCCAGACGAGGGGCTTCCTCTAGAGTCTCACTGCTGGGGA TCCCAGACGAGGGGCTTCCTATAGAGTCTCACTGCTGGGGA Direct Loss 0.982429013921615 0 0.5007759 0.32912558 prediction 0.964858027843231 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281715 chr11:70281715 nonsynonymous SNV 0.009 2 21 hm5C_associated_SNPs_46941 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:70281686-70281728
64251 chr20 3870266 3870266 1 + C G rs71647829 3870266 + 3870246 3870286 41 GCGAGCAGCGCGTCGGTGCCCGCGGTCGGGGCCTCGGCTGA GCGAGCAGCGCGTCGGTGCCGGCGGTCGGGGCCTCGGCTGA Direct Loss 0.982346864710986 0 0.910763 0.93083286 prediction 0.964693729421972 Functional Loss - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3870266 chr20:3870266 synonymous SNV . 0 21 hm5C_associated_SNPs_46944 1 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:3870250-3870269
64251 chr3 122514153 122514153 1 + C G LUSC 122514153 + 122514133 122514173 41 GCGGCGGCGGCGGCGCTGCCCGCGGCGGTCCCGGGTCCCGG GCGGCGGCGGCGGCGCTGCCGGCGGCGGTCCCGGGTCCCGG Direct Loss 0.982165339045297 0 0.78365064 0.89925086 prediction 0.964330678090595 Functional Loss - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122514153 chr3:122514153 synonymous SNV . 0 21 hm5C_associated_SNPs_46950 0 0 2 DDX3X POSTAR2 ENCODE chr3:122513978-122514168
64251 chr10 82192186 82192186 1 + C T rs114611572 82192186 + 82192166 82192206 41 GTGAGCAAGTCACTTGAGGTCGGGAGTTCGAGACCAGCCTG GTGAGCAAGTCACTTGAGGTTGGGAGTTCGAGACCAGCCTG Direct Loss 0.982066929005323 0 0.9272814 0.6985972 prediction 0.964133858010645 Functional Loss - FAM213A ENSG00000122378 UTR3 Human protein_coding chr10:82192186 chr10:82192186 . . 0 21 hm5C_associated_SNPs_46952 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:82192162-82192197
64251 chr17 30696710 30696710 1 + C T SKCM 30696710 + 30696690 30696730 41 CGCCAATGGTGCCCCCTTACCAGGGTGGGCCTCCTCGACCT CGCCAATGGTGCCCCCTTACTAGGGTGGGCCTCCTCGACCT Direct Loss 0.981825694856874 0 0.95262486 0.93512803 prediction 0.963651389713748 Functional Loss - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30696710 chr17:30696710 stopgain 1.000 1 21 hm5C_associated_SNPs_46956 0 0 19 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:30696687-30696714
64251 chr4 17616306 17616306 1 + C T THYM 17616306 + 17616286 17616326 41 TCCACTAGGGGGTATGTTTTCTGGGCAGCCACCCGGTCCCC TCCACTAGGGGGTATGTTTTTTGGGCAGCCACCCGGTCCCC Direct Loss 0.981697294888956 0 0.92512304 0.91468227 prediction 0.963394589777911 Functional Loss - MED28 ENSG00000118579 CDS Human protein_coding chr4:17616306 chr4:17616306 nonsynonymous SNV 0.828 1 21 hm5C_associated_SNPs_46959 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:17616270-17616326
64251 chr16 67208152 67208152 1 + C T BLCA 67208152 + 67208132 67208172 41 CGAGACGCTGCAGGCGGACTCGGGACTGCTGTTGGACGCGC CGAGACGCTGCAGGCGGACTTGGGACTGCTGTTGGACGCGC Direct Loss 0.981634209834134 0 0.9073533 0.8315977 prediction 0.963268419668268 Functional Loss - NOL3 ENSG00000140939 CDS Human protein_coding chr16:67208152 chr16:67208152 nonsynonymous SNV 0.765 3 21 hm5C_associated_SNPs_46962 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67208142-67208180
64251 chr5 178287106 178287106 1 + C T rs554080483 178287106 + 178287086 178287126 41 TGCGGCGGGGAGGCGCGGCCCGGGAACGCGGGATCCTGGGG TGCGGCGGGGAGGCGCGGCCTGGGAACGCGGGATCCTGGGG Direct Loss 0.981520176863049 0 0.9077889 0.7894882 prediction 0.963040353726098 Functional Loss - ZNF354B ENSG00000178338 UTR5 Human protein_coding chr5:178287106 chr5:178287106 . . 0 21 hm5C_associated_SNPs_46963 0 0 4 BUD13 POSTAR2 ENCODE chr5:178287074-178287200
64251 chr1 231474181 231474181 1 + C G rs143523668 231474181 + 231474161 231474201 41 TTCAGGAGGAGTGGAACTTGCAGGAGGCGGAGCGCGATCAT TTCAGGAGGAGTGGAACTTGGAGGAGGCGGAGCGCGATCAT Direct Loss 0.981496383411783 0 0.92410874 0.9188776 prediction 0.962992766823566 Functional Loss - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231474181 chr1:231474181 nonsynonymous SNV 0.620 0 21 hm5C_associated_SNPs_46965 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:231474118-231474183
64251 chr1 160340766 160340766 1 + C T STAD 160340766 + 160340746 160340786 41 GTACCGCACGGCCCACGCCACGCGAGAACGCATCCGCGTGG GTACCGCACGGCCCACGCCATGCGAGAACGCATCCGCGTGG Direct Loss 0.981479252497679 0 0.38945442 0.25782427 prediction 0.962958504995359 Functional Loss - NHLH1 ENSG00000171786 CDS Human protein_coding chr1:160340766 chr1:160340766 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_46966 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:160340743-160340774
64251 chr20 61443707 61443707 1 + C T UCEC 61443707 + 61443687 61443727 41 GCTGGTGCGGCGGGAGCTGCCGGGGGTGCGGCAGAGTGCCC GCTGGTGCGGCGGGAGCTGCTGGGGGTGCGGCAGAGTGCCC Direct Loss 0.981424624005847 0 0.94408274 0.91439867 prediction 0.962849248011694 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61443707 chr20:61443707 nonsynonymous SNV 0.067 3 21 hm5C_associated_SNPs_46967 0 0 2 BUD13 POSTAR2 ENCODE chr20:61443697-61443710
64251 chr19 36120454 36120454 1 + C G LUAD 36120454 + 36120434 36120474 41 AGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTGC AGTTCTGGGGGCTCCAGTACGTGGAATCCCAACTGCTGTGC Direct Loss 0.981404835678171 0 0.8686094 0.7304591 prediction 0.962809671356342 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120454 chr19:36120454 nonsynonymous SNV 0.980 1 21 hm5C_associated_SNPs_46969 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:36120426-36120482
64251 chr6 151773706 151773706 1 + C T LUSC 151773706 + 151773686 151773726 41 TGTCGTCCCGGCGTCTCTCTCAGGACAGGACGTGGGGTTAG TGTCGTCCCGGCGTCTCTCTTAGGACAGGACGTGGGGTTAG Direct Loss 0.981336433302633 0 0.92392755 0.8890819 prediction 0.962672866605266 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151773706 chr6:151773706 nonsynonymous SNV 0.037 1 21 hm5C_associated_SNPs_46971 0 0 2 DDX3X POSTAR2 ENCODE chr6:151773622-151773722
64251 chr16 732385 732385 1 - G A UCEC 732385 - 732365 732405 41 GGTCAGGGGGCTCCGGGTCACGGGGTCAAAATGACCCACAC GGTCAGGGGGCTCCGGGTCATGGGGTCAAAATGACCCACAC Direct Loss 0.981181425038265 0 0.9301066 0.8999257 prediction 0.962362850076531 Functional Loss - STUB1 ENSG00000103266 CDS Human protein_coding chr16:732385 chr16:732385 nonsynonymous SNV 0.992 3 21 hm5C_associated_SNPs_46973 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:732350-732411
64251 chr17 46628488 46628488 1 - G A PRAD 46628488 - 46628468 46628508 41 GGCGGAGGCAGTGGTGGCAGCGGGGGCGGTGGCGGCGGCGG GGCGGAGGCAGTGGTGGCAGTGGGGGCGGTGGCGGCGGCGG Direct Loss 0.981109730642014 0 0.925731 0.9119381 prediction 0.962219461284029 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628488 chr17:46628488 synonymous SNV . 0 21 hm5C_associated_SNPs_46975 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr17:46628475-46628501
64251 chr8 109482115 109482115 1 + C T LUSC 109482115 + 109482095 109482135 41 GGAAAAATGTGGAGGCCATTCGGGAGCTGAATGAGTATCTG GGAAAAATGTGGAGGCCATTTGGGAGCTGAATGAGTATCTG Direct Loss 0.98101368179923 0 0.9046985 0.5218032 prediction 0.962027363598461 Functional Loss - EMC2 ENSG00000104412 CDS Human protein_coding chr8:109482115 chr8:109482115 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_46979 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:109482100-109482123
64251 chr3 196439449 196439449 1 + C T rs10855 196439449 + 196439429 196439469 41 GGGCGGCCGCCTGGCTGCTCCTCGGGGCGGCGACCGGGCTC GGGCGGCCGCCTGGCTGCTCTTCGGGGCGGCGACCGGGCTC Direct Loss 0.980998106007384 0 0.9258696 0.9383979 prediction 0.961996212014769 Functional Loss - PIGX ENSG00000163964 CDS Human protein_coding chr3:196439449 chr3:196439449 nonsynonymous SNV 0.289 1 21 hm5C_associated_SNPs_46980 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:196439449-196439450
64251 chr6 139094938 139094938 1 + C T LUSC 139094938 + 139094918 139094958 41 AGCTGCGGAGGAGCGGGTCCCGGGATGTGACCGGGGCTCTG AGCTGCGGAGGAGCGGGTCCTGGGATGTGACCGGGGCTCTG Direct Loss 0.980870260542162 0 0.9183726 0.9059667 prediction 0.961740521084324 Functional Loss - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139094938 chr6:139094938 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_46986 0 0 1 RPS3 POSTAR2 ENCODE chr6:139094931-139094999
64251 chr12 54379166 54379166 1 + C T COAD 54379166 + 54379146 54379186 41 TCTGGGAGTGACTTCAATTGCGGGGTGATGAGGGGCTGCGG TCTGGGAGTGACTTCAATTGTGGGGTGATGAGGGGCTGCGG Direct Loss 0.980503714995987 0 0.9474348 0.92579126 prediction 0.961007429991973 Functional Loss - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379166 chr12:54379166 synonymous SNV . 0 21 hm5C_associated_SNPs_46988 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:54379161-54379208
64251 chr18 22007038 22007038 1 + C G rs73943449 22007038 + 22007018 22007058 41 TCTGGGCCGAAGGCAAAAACCGGGGTTTCGATCCCCACCCT TCTGGGCCGAAGGCAAAAACGGGGGTTTCGATCCCCACCCT Direct Loss 0.980477649808968 0 0.9516746 0.9468815 prediction 0.960955299617937 Functional Loss - IMPACT ENSG00000154059 intronic Human protein_coding chr18:22007038 chr18:22007038 . . 0 21 hm5C_associated_SNPs_46990 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr18:22007007-22007043
64251 chr16 67237481 67237481 1 + C T STAD 67237481 + 67237461 67237501 41 ACTTCATTGCCCCCTCCAAGCGGGAGGTGAGTGTCCGCCAG ACTTCATTGCCCCCTCCAAGTGGGAGGTGAGTGTCCGCCAG Direct Loss 0.980376662245793 0 0.947871 0.9187689 prediction 0.960753324491585 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67237481 chr16:67237481 nonsynonymous SNV 0.980 2 21 hm5C_associated_SNPs_46992 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:67237437-67237485
64251 chr1 78511862 78511862 1 + C A LUSC 78511862 + 78511842 78511882 41 GGCGAGCCGACGGGCGCGGGCGGCGGGAGCCTCTCAGCGTC GGCGAGCCGACGGGCGCGGGAGGCGGGAGCCTCTCAGCGTC Direct Loss 0.980319507261822 0 0.9208216 0.92178106 prediction 0.960639014523644 Functional Loss - GIPC2 ENSG00000137960 CDS Human protein_coding chr1:78511862 chr1:78511862 synonymous SNV . 0 21 hm5C_associated_SNPs_46994 0 0 3 DDX3X POSTAR2 ENCODE chr1:78511800-78511881
64251 chr17 54912400 54912400 1 + C A HNSC 54912400 + 54912380 54912420 41 GCGTGTGCGCGCAGCACATTCTGCAGGGCGCCTTCTGCGAC GCGTGTGCGCGCAGCACATTATGCAGGGCGCCTTCTGCGAC Direct Loss 0.980311793154603 0 0.28026792 0.22086462 prediction 0.960623586309205 Functional Loss - DGKE ENSG00000153933 CDS Human protein_coding chr17:54912400 chr17:54912400 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_46995 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:54912396-54912439
64251 chr19 17379674 17379674 1 + C T COAD 17379674 + 17379654 17379694 41 GGAGGAGGAAGAGGAGCACTCGGCAGAGCCTCGGCCCCGCA GGAGGAGGAAGAGGAGCACTTGGCAGAGCCTCGGCCCCGCA Direct Loss 0.98016103459001 0 0.8937466 0.69640225 prediction 0.960322069180021 Functional Loss - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17379674 chr19:17379674 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_46998 0 0 8 BUD13 POSTAR2 ENCODE chr19:17379564-17379719
64251 chr9 135866411 135866411 1 + C T LUSC 135866411 + 135866391 135866431 41 AGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCACAATCTC AGGTGGACCTGCGGCGGCACTGCGAGAGCCAGCACAATCTC Direct Loss 0.980108262871606 0 0.42483845 0.49710086 prediction 0.960216525743212 Functional Loss - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135866411 chr9:135866411 nonsynonymous SNV 0.718 4 21 hm5C_associated_SNPs_47001 0 0 1 RPS3 POSTAR2 ENCODE chr9:135866389-135866480
64251 chr1 42922314 42922314 1 + C T BLCA 42922314 + 42922294 42922334 41 GCTGAGGTTATGGCTCGCTTCGCGGCCAGGCTGGGCGCGCA GCTGAGGTTATGGCTCGCTTTGCGGCCAGGCTGGGCGCGCA Direct Loss 0.980068003213181 0 0.42140725 0.11766508 prediction 0.960136006426363 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922314 chr1:42922314 synonymous SNV . 0 21 hm5C_associated_SNPs_47003 0 0 5 CPSF2 POSTAR2 GSE37401,GSM917670 chr1:42922300-42922322
64251 chr7 98951655 98951655 1 + C T rs73710441 98951655 + 98951635 98951675 41 GGCACTGGTGGCTGGGTCCACGGGGTAAGCTTCTCTGCCAG GGCACTGGTGGCTGGGTCCATGGGGTAAGCTTCTCTGCCAG Direct Loss 0.980048768988812 0 0.9114163 0.8904085 prediction 0.960097537977624 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98951655 chr7:98951655 synonymous SNV . 0 21 hm5C_associated_SNPs_47005 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:98951618-98951671
64251 chr9 21802922 21802922 1 + C A rs117769854 21802922 + 21802902 21802942 41 AGGGACTGGGGCGCGGCACTCGGGACTCACTTGCCGCGCGA AGGGACTGGGGCGCGGCACTAGGGACTCACTTGCCGCGCGA Direct Loss 0.980045199774626 0 0.9543278 0.93263316 prediction 0.960090399549252 Functional Loss - MTAP ENSG00000099810 CDS Human protein_coding chr9:21802922 chr9:21802922 synonymous SNV . 0 21 hm5C_associated_SNPs_47006 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:21802912-21802939
64251 chr13 28494600 28494600 1 + C A LUSC 28494600 + 28494580 28494620 41 AGGGAGCCGAGCCGGGCGTCCTGGAGGAGCCCAACCGCGTC AGGGAGCCGAGCCGGGCGTCATGGAGGAGCCCAACCGCGTC Direct Loss 0.97990857676243 0 0.91268694 0.90491253 prediction 0.959817153524861 Functional Loss - PDX1 ENSG00000139515 CDS Human protein_coding chr13:28494600 chr13:28494600 nonsynonymous SNV 0.133 1 21 hm5C_associated_SNPs_47011 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr13:28494599-28494634
64251 chr19 45593559 45593559 1 + C T HNSC 45593559 + 45593539 45593579 41 AGCGGGCACGAGCCGCCCTTCGGGAGCGTTACCTCCGCAGC AGCGGGCACGAGCCGCCCTTTGGGAGCGTTACCTCCGCAGC Direct Loss 0.9798779639916 0 0.9302945 0.90625125 prediction 0.9597559279832 Functional Loss - GEMIN7 ENSG00000142252 CDS Human protein_coding chr19:45593559 chr19:45593559 nonsynonymous SNV 0.701 4 21 hm5C_associated_SNPs_47015 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:45593553-45593582
64251 chr22 40801207 40801207 1 + C T rs150525363 40801207 + 40801187 40801227 41 TTCGCCAGCATGGGTAGCATCGGGGTGCCCCGCCTGCGCAG TTCGCCAGCATGGGTAGCATTGGGGTGCCCCGCCTGCGCAG Direct Loss 0.979864138533346 0 0.9704379 0.9574051 prediction 0.959728277066691 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40801207 chr22:40801207 synonymous SNV . 0 21 hm5C_associated_SNPs_47016 0 0 2 DDX24 POSTAR2 ENCODE chr22:40801145-40801221
64251 chr19 10224918 10224918 1 + C A LUSC 10224918 + 10224898 10224938 41 AGCGTATAGCCTGGTGCTGGCGGGGTTGGGCTGCGGCCTGC AGCGTATAGCCTGGTGCTGGAGGGGTTGGGCTGCGGCCTGC Direct Loss 0.979846499708329 0 0.9281094 0.91134524 prediction 0.959692999416659 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224918 chr19:10224918 nonsynonymous SNV 0.001 3 21 hm5C_associated_SNPs_47017 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10224917-10224946
64251 chr16 1544556 1544556 1 + C T rs569479774 1544556 + 1544536 1544576 41 AGCTGTGGGCCAGCTTCTTCCTGGAGGGCCCGGCGGACCAA AGCTGTGGGCCAGCTTCTTCTTGGAGGGCCCGGCGGACCAA Direct Loss 0.979832765562228 0 0.8797982 0.9126298 prediction 0.959665531124455 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1544556 chr16:1544556 synonymous SNV . 0 21 hm5C_associated_SNPs_47018 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:1544540-1544560
64251 chr3 186299202 186299202 1 + C T COAD 186299202 + 186299182 186299222 41 CAAGGCAGGCTCCTGGCAAACGGAAGTGCAATTGTCGGCAA CAAGGCAGGCTCCTGGCAAATGGAAGTGCAATTGTCGGCAA Direct Loss 0.979815674035748 0 0.5550258 0.32928604 prediction 0.959631348071497 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186299202 chr3:186299202 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_47019 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:186299188-186299248
64251 chr19 1434829 1434829 1 + C T BLCA 1434829 + 1434809 1434849 41 GGGTCCCTCCGTGCCAGGGTCGGGGGGCCCCCCCGCCGGCG GGGTCCCTCCGTGCCAGGGTTGGGGGGCCCCCCCGCCGGCG Direct Loss 0.979644076165926 0 0.96609354 0.9490589 prediction 0.959288152331851 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434829 chr19:1434829 nonsynonymous SNV 0.955 1 21 hm5C_associated_SNPs_47022 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr1 248028136 248028136 1 + C T PAAD 248028136 + 248028116 248028156 41 GAGCGACGCTGCAGAGACTGCGGGAGAGCAAGAGCCGGCTG GAGCGACGCTGCAGAGACTGTGGGAGAGCAAGAGCCGGCTG Direct Loss 0.979631944527364 0 0.9154866 0.87796164 prediction 0.959263889054729 Functional Loss - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248028136 chr1:248028136 nonsynonymous SNV 0.103 2 21 hm5C_associated_SNPs_47023 0 0 4 UCHL5 POSTAR2 ENCODE chr1:248028101-248028186
64251 chr16 19079036 19079036 1 + C G rs529955941 19079036 + 19079016 19079056 41 CCGCCTTTGGCGGCTGCGCCCGGGGGCCCGGCGGTCCCTCT CCGCCTTTGGCGGCTGCGCCGGGGGGCCCGGCGGTCCCTCT Direct Loss 0.979596635722276 0 0.93233323 0.9290378 prediction 0.959193271444553 Functional Loss - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19079036 chr16:19079036 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47024 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:19079020-19079040
64251 chr12 58014803 58014803 1 + C T UCEC 58014803 + 58014783 58014823 41 GTGGGGAATCTGAGCGGAATCGAGAAGGAGCAGCTGGACGC GTGGGGAATCTGAGCGGAATTGAGAAGGAGCAGCTGGACGC Direct Loss 0.979541186107107 0 0.88353765 0.89449525 prediction 0.959082372214213 Functional Loss - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58014803 chr12:58014803 synonymous SNV . 0 21 hm5C_associated_SNPs_47029 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:58014783-58014804
64251 chr15 29409706 29409706 1 + C T rs62007245 29409706 + 29409686 29409726 41 CCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCACC CCTCCGAGGGACGCGGCTCCTGGGGCAGGGCAGCCGTCACC Direct Loss 0.979445711709408 0 0.92957294 0.8741197 prediction 0.958891423418816 Functional Loss - APBA2 ENSG00000034053 UTR3 Human protein_coding chr15:29409706 chr15:29409706 . . 0 21 hm5C_associated_SNPs_47033 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:29409662-29409715
64251 chr5 23527469 23527469 1 + C A rs112501567 23527469 + 23527449 23527489 41 GGGAGTGTGGGCGGGGCTTTCGCGATAAGTCACACCTCCTC GGGAGTGTGGGCGGGGCTTTAGCGATAAGTCACACCTCCTC Direct Loss 0.979383753495843 0 0.9317788 0.9066542 prediction 0.958767506991685 Functional Loss - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527469 chr5:23527469 nonsynonymous SNV 0.005 0 21 hm5C_associated_SNPs_47035 0 0 1 LIN28B POSTAR2 ENCODE chr5:23527410-23527478
64251 chr1 36752451 36752451 1 + C A LGG 36752451 + 36752431 36752471 41 GGCCAAGGAGCAGACATTCTCTGGAGGCACCTCTCAAGATA GGCCAAGGAGCAGACATTCTATGGAGGCACCTCTCAAGATA Direct Loss 0.979315053411353 0 0.86678374 0.35887823 prediction 0.958630106822706 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752451 chr1:36752451 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_47037 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:36752417-36752468
64251 chr20 61450608 61450608 1 + C T SKCM 61450608 + 61450588 61450628 41 CCCAGGAAAGCCGGGGAAACCAGGAGAGGCTGGGCTGCCGG CCCAGGAAAGCCGGGGAAACTAGGAGAGGCTGGGCTGCCGG Direct Loss 0.979307502886258 0 0.9299726 0.92619866 prediction 0.958615005772517 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450608 chr20:61450608 nonsynonymous SNV 0.888 2 21 hm5C_associated_SNPs_47038 0 0 5 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr17 21075445 21075445 1 + C T LUSC 21075445 + 21075425 21075465 41 CGGCTGCTGCAGTGGGTGCGCGGGAAGGCCTACCTGCGGAA CGGCTGCTGCAGTGGGTGCGTGGGAAGGCCTACCTGCGGAA Direct Loss 0.979299453591796 0 0.88836193 0.9008595 prediction 0.958598907183592 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21075445 chr17:21075445 synonymous SNV . 0 21 hm5C_associated_SNPs_47039 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr17:21075402-21075460
64251 chr1 201952238 201952238 1 + C G MESO 201952238 + 201952218 201952258 41 TACCGCGTCGGGGAGGGACCCGGGGTGAGTGCGCCCCAGAC TACCGCGTCGGGGAGGGACCGGGGGTGAGTGCGCCCCAGAC Direct Loss 0.979259666462971 0 0.96095574 0.9576907 prediction 0.958519332925942 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201952238 chr1:201952238 synonymous SNV . 0 21 hm5C_associated_SNPs_47040 0 0 4 FMR1 POSTAR2 ENCODE chr1:201952199-201952242
64251 chr12 53497419 53497419 1 + C T ACC 53497419 + 53497399 53497439 41 CAGAAGGGCTGGGAGGGGAGCGGGAGCGCCAACCCTGTGGA CAGAAGGGCTGGGAGGGGAGTGGGAGCGCCAACCCTGTGGA Direct Loss 0.979251661933163 0 0.92067736 0.90628076 prediction 0.958503323866325 Functional Loss - SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53497419 chr12:53497419 nonsynonymous SNV 0.038 0 21 hm5C_associated_SNPs_47041 0 0 5 BUD13 POSTAR2 ENCODE chr12:53497415-53497441
64251 chr12 65564324 65564324 1 + C T rs183253527 65564324 + 65564304 65564344 41 GTTCAGGGAGGGGGAGGACTCGCGATGAATGACAGGGCGGC GTTCAGGGAGGGGGAGGACTTGCGATGAATGACAGGGCGGC Direct Loss 0.979205880967971 0 0.8868239 0.87435603 prediction 0.958411761935942 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564324 chr12:65564324 synonymous SNV . 0 21 hm5C_associated_SNPs_47043 1 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:65564273-65564325
64251 chr19 50386145 50386145 1 + C T SKCM 50386145 + 50386125 50386165 41 GCTGAAGAACCGGATCTTCTCGGGGGTGAGTGCCAGGACAG GCTGAAGAACCGGATCTTCTTGGGGGTGAGTGCCAGGACAG Direct Loss 0.978996271806404 0 0.9524003 0.9209316 prediction 0.957992543612808 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386145 chr19:50386145 nonsynonymous SNV 0.434 1 21 hm5C_associated_SNPs_47049 0 0 3 PPIG POSTAR2 ENCODE chr19:50386099-50386149
64251 chr20 62521229 62521229 1 + C T COAD 62521229 + 62521209 62521249 41 GTTGTGGGTGACAGAGAGAACGGCAGTGACAACCTCCCTTC GTTGTGGGTGACAGAGAGAATGGCAGTGACAACCTCCCTTC Direct Loss 0.97898914017372 0 0.44184285 0.54312396 prediction 0.95797828034744 Functional Loss - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521229 chr20:62521229 synonymous SNV 0.971 0 21 hm5C_associated_SNPs_47050 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:62521200-62521238
64251 chr5 170883681 170883681 1 + C T LUSC 170883681 + 170883661 170883701 41 CGCGGAAGGGCCCCAAGACCCGGGAGAACCAGCAGGACGTG CGCGGAAGGGCCCCAAGACCTGGGAGAACCAGCAGGACGTG Direct Loss 0.978939795031835 0 0.900341 0.81427634 prediction 0.957879590063671 Functional Loss - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170883681 chr5:170883681 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_47051 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:170883675-170883707
64251 chr12 48358151 48358151 1 + C T LUAD 48358151 + 48358131 48358171 41 TTCCCATATGTGGAATTCACCGGGAGAGATAGCATCACCTG TTCCCATATGTGGAATTCACTGGGAGAGATAGCATCACCTG Direct Loss 0.978741400762873 0 0.92626846 0.90387845 prediction 0.957482801525746 Functional Loss - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48358151 chr12:48358151 synonymous SNV . 0 21 hm5C_associated_SNPs_47058 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:48358068-48358174
64251 chr6 4021934 4021934 1 + C T rs540317183 4021934 + 4021914 4021954 41 CCTGCCGCGCGTCGTTGCCCCGGGAGGCGTAGGCGCGAGCG CCTGCCGCGCGTCGTTGCCCTGGGAGGCGTAGGCGCGAGCG Direct Loss 0.978630779761356 0 0.9263034 0.9098631 prediction 0.957261559522713 Functional Loss - PRPF4B ENSG00000112739 UTR5 Human protein_coding chr6:4021934 chr6:4021934 . . 0 21 hm5C_associated_SNPs_47065 0 0 1 XPO5 POSTAR2 ENCODE chr6:4021891-4021946
64251 chr11 400063 400063 1 + C T CESC 400063 + 400043 400083 41 CCTGGTGTTGAGCCCCCTGTCGGGGGCTGGGGGTCCCCCCC CCTGGTGTTGAGCCCCCTGTTGGGGGCTGGGGGTCCCCCCC Direct Loss 0.978576053665659 0 0.9604398 0.934307 prediction 0.957152107331318 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:400063 chr11:400063 nonsynonymous SNV 0.358 4 21 hm5C_associated_SNPs_47068 0 0 1 RBM15 POSTAR2 ENCODE chr11:400047-400096
64251 chr20 25388436 25388436 1 + C T rs549010664 25388436 + 25388416 25388456 41 GCTGGTGGTTGGCAAGGCCGCGGGAGTGGGAAGCGTCCGCC GCTGGTGGTTGGCAAGGCCGTGGGAGTGGGAAGCGTCCGCC Direct Loss 0.978553834659012 0 0.9061183 0.88456094 prediction 0.957107669318023 Functional Loss - GINS1 ENSG00000101003 UTR5 Human protein_coding chr20:25388436 chr20:25388436 . . 0 21 hm5C_associated_SNPs_47069 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr20:25388400-25388460
64251 chrX 46433887 46433887 1 + C T BLCA 46433887 + 46433867 46433907 41 GCTGCGGCTGTACGCGCCGCCGGGGGACCCCGCTGCGCGCG GCTGCGGCTGTACGCGCCGCTGGGGGACCCCGCTGCGCGCG Direct Loss 0.978438445534203 0 0.932565 0.8982731 prediction 0.956876891068407 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433887 chrX:46433887 nonsynonymous SNV 0.917 2 21 hm5C_associated_SNPs_47074 0 0 1 DDX6 POSTAR2 ENCODE chrX:46433856-46433900
64251 chr1 150484918 150484918 1 + C T UCEC 150484918 + 150484898 150484938 41 GCCACCCTCCCAGCCCTACTCGGGATGAGTGCTTTGCCCGT GCCACCCTCCCAGCCCTACTTGGGATGAGTGCTTTGCCCGT Direct Loss 0.978278404809617 0 0.9517625 0.9208746 prediction 0.956556809619235 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484918 chr1:150484918 nonsynonymous SNV 0.721 5 21 hm5C_associated_SNPs_47081 0 0 1 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr14 31091549 31091549 1 + C T UCEC 31091549 + 31091529 31091569 41 GCTCGTGGGAGCCAAGATGGCGGCGGCGGCGGCAGCGACAG GCTCGTGGGAGCCAAGATGGTGGCGGCGGCGGCAGCGACAG Direct Loss 0.97824011233897 0 0.8966569 0.8526311 prediction 0.95648022467794 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31091549 chr14:31091549 nonsynonymous SNV 0.522 2 21 hm5C_associated_SNPs_47083 0 0 5 DDX3X POSTAR2 ENCODE chr14:31091528-31091586
64251 chr14 24607790 24607790 1 + C T UCEC 24607790 + 24607770 24607810 41 GTGAGGAGGCAAGGGCAGGGCAGGGGTGGGCAGAGGCAGCT GTGAGGAGGCAAGGGCAGGGTAGGGGTGGGCAGAGGCAGCT Direct Loss 0.978231680226304 0 0.87082887 0.81306636 prediction 0.956463360452608 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607790 chr14:24607790 synonymous SNV . 0 21 hm5C_associated_SNPs_47085 0 0 2 PRPF8 POSTAR2 ENCODE chr14:24607764-24607807
64251 chr5 60241095 60241095 1 + C T BLCA 60241095 + 60241075 60241115 41 TGGACGGCATGGGTTGGTCTCAGGATTTGTTCCGCGCCTTG TGGACGGCATGGGTTGGTCTTAGGATTTGTTCCGCGCCTTG Direct Loss 0.978172340164845 0 0.92262685 0.89268863 prediction 0.956344680329689 Functional Loss - NDUFAF2 ENSG00000164182 CDS Human protein_coding chr5:60241095 chr5:60241095 stopgain 0.003 0 21 hm5C_associated_SNPs_47088 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:60241067-60241098
64251 chr19 13873592 13873592 1 + C T CESC 13873592 + 13873572 13873612 41 GCATCGTGCGGCGGAGGTCTCGGGACGTCCCGGAGAGCCCC GCATCGTGCGGCGGAGGTCTTGGGACGTCCCGGAGAGCCCC Direct Loss 0.978165092797443 0 0.94934756 0.92189115 prediction 0.956330185594885 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13873592 chr19:13873592 nonsynonymous SNV 0.009 2 21 hm5C_associated_SNPs_47089 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:13873578-13873596
64251 chr19 16337279 16337279 1 + C T BLCA 16337279 + 16337259 16337299 41 AGCGAGATCGTGGGCTCCATCAAGATGCGAGTCTTCCTCTC AGCGAGATCGTGGGCTCCATTAAGATGCGAGTCTTCCTCTC Direct Loss 0.978028280411795 0 0.9091754 0.880914 prediction 0.956056560823591 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16337279 chr19:16337279 synonymous SNV . 0 21 hm5C_associated_SNPs_47092 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:16337279-16337280
64251 chrX 49645301 49645301 1 + C T SARC 49645301 + 49645281 49645321 41 GTGAGATGTCGTCGCTGTTTCGGGAGTTGTATTCTGGAAAC GTGAGATGTCGTCGCTGTTTTGGGAGTTGTATTCTGGAAAC Direct Loss 0.97800135206701 0 0.94540346 0.90891206 prediction 0.956002704134021 Functional Loss - USP27X ENSG00000242013 CDS Human other chrX:49645301 chrX:49645301 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_47093 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:49645285-49645309
64251 chr16 204410 204410 1 + C G rs111716204 204410 + 204390 204430 41 GTACCGCTGAGCGCCGCCTCCGGGACCCCCAGGACAGGCTG GTACCGCTGAGCGCCGCCTCGGGGACCCCCAGGACAGGCTG Direct Loss 0.977996972112922 0 0.90747106 0.90401554 prediction 0.955993944225844 Functional Loss - HBZ ENSG00000130656 UTR3 Human protein_coding chr16:204410 chr16:204410 . . 0 21 hm5C_associated_SNPs_47094 0 0 11 DDX24 POSTAR2 ENCODE chr16:204366-204491
64251 chr6 34738120 34738120 1 + C T SKCM 34738120 + 34738100 34738140 41 CCCCATATGGGGGGCCCTCCCATGATGCCAATGATGGGCCC CCCCATATGGGGGGCCCTCCTATGATGCCAATGATGGGCCC Direct Loss 0.977989730846176 0 0.3695476 0.23396114 prediction 0.955979461692352 Functional Loss - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34738120 chr6:34738120 synonymous SNV . 0 21 hm5C_associated_SNPs_47095 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:34738091-34738131
64251 chr19 18977553 18977553 1 + C A rs567906682 18977553 + 18977533 18977573 41 GCGGAGGAGGGGCCGGCCCGCGGGAGCCGCGGCCACCAGGA GCGGAGGAGGGGCCGGCCCGAGGGAGCCGCGGCCACCAGGA Direct Loss 0.977906249802185 0 0.9467242 0.94111586 prediction 0.955812499604371 Functional Loss - UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18977553 chr19:18977553 . . 0 21 hm5C_associated_SNPs_47099 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:18977552-18977553
64251 chr7 64498737 64498737 1 + C A BLCA 64498737 + 64498717 64498757 41 GAGGCGGAGGGAGGCGGTGGCGGCGGCGGCAGGATGGCGAC GAGGCGGAGGGAGGCGGTGGAGGCGGCGGCAGGATGGCGAC Direct Loss 0.977743043206504 0 0.9226102 0.91160834 prediction 0.955486086413009 Functional Loss - CCT6P3 ENSG00000234585 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:64498737 chr7:64498737 . . 0 21 hm5C_associated_SNPs_47102 0 0 4 GTF2F1 POSTAR2 ENCODE chr7:64498737-64498793
64251 chr6 26045786 26045786 1 + C T LUAD 26045786 + 26045766 26045806 41 GCCCGGGCACCGTGGCCTTGCGCGAAATCCGTCGCTACCAG GCCCGGGCACCGTGGCCTTGTGCGAAATCCGTCGCTACCAG Direct Loss 0.977528256331639 0 0.5652851 0.31121215 prediction 0.955056512663279 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045786 chr6:26045786 nonsynonymous SNV 0.485 0 21 hm5C_associated_SNPs_47109 0 0 5 DDX3X POSTAR2 ENCODE chr6:26045749-26045789
64251 chr19 16790859 16790859 1 + C T rs730120 16790859 + 16790839 16790879 41 TGCGCCATGCTGCATTGCTTCGGGAGCTACATCCTGGCTGA TGCGCCATGCTGCATTGCTTTGGGAGCTACATCCTGGCTGA Direct Loss 0.977482950798535 0 0.93341464 0.91368586 prediction 0.95496590159707 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16790859 chr19:16790859 synonymous SNV . 0 21 hm5C_associated_SNPs_47111 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:16790858-16790859
64251 chr2 191745945 191745945 1 + C A rs551795825 191745945 + 191745925 191745965 41 CGAGGCGGGGGACGGCCGGCCGCGGGCCCGGCTGCCGCCGC CGAGGCGGGGGACGGCCGGCAGCGGGCCCGGCTGCCGCCGC Direct Loss 0.977471869028026 0 0.9092448 0.9079195 prediction 0.954943738056051 Functional Loss - GLS ENSG00000115419 CDS Human protein_coding chr2:191745945 chr2:191745945 synonymous SNV . 0 21 hm5C_associated_SNPs_47113 0 0 4 GEMIN5 POSTAR2 ENCODE chr2:191745916-191745972
64251 chr19 52084728 52084728 1 + C T COAD 52084728 + 52084708 52084748 41 CTGCCCAGAGATGCCTGTACCGGGATGTGATGCTGGAGCTC CTGCCCAGAGATGCCTGTACTGGGATGTGATGCTGGAGCTC Direct Loss 0.977437978614431 0 0.9411011 0.9171252 prediction 0.954875957228862 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52084728 chr19:52084728 nonsynonymous SNV 0.501 0 21 hm5C_associated_SNPs_47115 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52084710-52084739
64251 chr22 50615953 50615953 1 + C T COAD 50615953 + 50615933 50615973 41 CCCGGACGGGGCGGCAGGTGCGGGGCCCGCGGTGCGCGTGA CCCGGACGGGGCGGCAGGTGTGGGGCCCGCGGTGCGCGTGA Direct Loss 0.977393762488646 0 0.9273281 0.8989476 prediction 0.954787524977292 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615953 chr22:50615953 nonsynonymous SNV 0.005 0 21 hm5C_associated_SNPs_47116 0 0 2 RBM15 POSTAR2 ENCODE chr22:50615896-50615955
64251 chr3 143691520 143691520 1 + C T BLCA 143691520 + 143691500 143691540 41 TCAAGCGCCTCGGCTCGCAGCGCGAGCTGGCGCAGCTCGAC TCAAGCGCCTCGGCTCGCAGTGCGAGCTGGCGCAGCTCGAC Direct Loss 0.977245002468738 0 0.4040208 0.43258464 prediction 0.954490004937475 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691520 chr3:143691520 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_47121 0 0 2 SND1 POSTAR2 ENCODE chr3:143691469-143691547
64251 chr3 101572133 101572133 1 + C T LAML 101572133 + 101572113 101572153 41 GCTCCCCCGCAGAGCAGTGTCAGGACTTCCATGGAGGGCAG GCTCCCCCGCAGAGCAGTGTTAGGACTTCCATGGAGGGCAG Direct Loss 0.977200818469622 0 0.5085975 0.2437909 prediction 0.954401636939244 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101572133 chr3:101572133 stopgain 0.805 0 21 hm5C_associated_SNPs_47122 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:101572129-101572143
64251 chr16 30409298 30409298 1 + C T HNSC 30409298 + 30409278 30409318 41 TCAAGCACCAGCGGACACACCGGGGGGAGCAGCCCCCCCGA TCAAGCACCAGCGGACACACTGGGGGGAGCAGCCCCCCCGA Direct Loss 0.977029484688797 0 0.9394685 0.92768526 prediction 0.954058969377594 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409298 chr16:30409298 nonsynonymous SNV 0.375 3 21 hm5C_associated_SNPs_47130 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:30409260-30409300
64251 chr1 201951974 201951974 1 + C T rs533182047 201951974 + 201951954 201951994 41 GCAGGGAGCCGGGGGCTGAGCGGCACCGCGGTCCTGGACCT GCAGGGAGCCGGGGGCTGAGTGGCACCGCGGTCCTGGACCT Direct Loss 0.97700386085545 0 0.87518954 0.8181368 prediction 0.9540077217109 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201951974 chr1:201951974 synonymous SNV . 0 21 hm5C_associated_SNPs_47131 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr1:201951971-201952005
64251 chr9 131581004 131581004 1 + C A rs558558430 131581004 + 131580984 131581024 41 CCTGACCCTGGCGTCGGGCGCGGGGCTGGGTGCGGTCGTCG CCTGACCCTGGCGTCGGGCGAGGGGCTGGGTGCGGTCGTCG Direct Loss 0.976962088966472 0 0.91556466 0.9016928 prediction 0.953924177932944 Functional Loss - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131581004 chr9:131581004 nonsynonymous SNV 0.993 0 21 hm5C_associated_SNPs_47135 0 0 3 GEMIN5 POSTAR2 ENCODE chr9:131580996-131581033
64251 chr13 37580090 37580090 1 + C A rs140108815 37580090 + 37580070 37580110 41 TCTACCACCCCTGTGTTCATCGAGATTCCGGTCTGGACCTC TCTACCACCCCTGTGTTCATAGAGATTCCGGTCTGGACCTC Direct Loss 0.97694656376672 0 0.87946653 0.5160975 prediction 0.953893127533441 Functional Loss - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37580090 chr13:37580090 stopgain 0.993 1 21 hm5C_associated_SNPs_47137 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819209 chr13:37580080-37580100
64251 chr12 96350685 96350685 1 + C T HNSC 96350685 + 96350665 96350705 41 GCGTGATTGAGCGCGCCCGGCGGGAGCTGGACATCGGCATC GCGTGATTGAGCGCGCCCGGTGGGAGCTGGACATCGGCATC Direct Loss 0.97691370052111 0 0.8683318 0.75789356 prediction 0.95382740104222 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350685 chr12:96350685 nonsynonymous SNV 0.230 3 21 hm5C_associated_SNPs_47138 0 0 2 BUD13 POSTAR2 ENCODE chr12:96350674-96350768
64251 chr17 46628467 46628467 1 - G C LUSC 46628467 - 46628447 46628487 41 GGGGGCGGTGGCGGCGGCGGCGGGGGAGGGGACAAGAGCCC GGGGGCGGTGGCGGCGGCGGGGGGGGAGGGGACAAGAGCCC Direct Loss 0.976905826305231 0 0.93517935 0.93512547 prediction 0.953811652610463 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628467 chr17:46628467 synonymous SNV . 0 21 hm5C_associated_SNPs_47139 0 0 2 BUD13 POSTAR2 ENCODE chr17:46628411-46628477
64251 chr2 88991300 88991300 1 + C T rs549384459 88991300 + 88991280 88991320 41 GCCGGGGGCGCGGCCTCCGGCGGAGGAGGGAACAGCTGGGA GCCGGGGGCGCGGCCTCCGGTGGAGGAGGGAACAGCTGGGA Direct Loss 0.976793867857734 0 0.9369191 0.90620565 prediction 0.953587735715468 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:88991300 chr2:88991300 synonymous SNV . 0 21 hm5C_associated_SNPs_47141 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:88991256-88991310
64251 chr11 102218165 102218165 1 + C A rs35407100 102218165 + 102218145 102218185 41 CGGGTGGGGACGCGAGGGCCCGCGGGGGCCCACTTCCCTGA CGGGTGGGGACGCGAGGGCCAGCGGGGGCCCACTTCCCTGA Direct Loss 0.976787359740707 0 0.90589714 0.9050832 prediction 0.953574719481414 Functional Loss - BIRC2 ENSG00000110330 intronic Human protein_coding chr11:102218165 chr11:102218165 . . 0 21 hm5C_associated_SNPs_47142 0 0 13 BUD13 POSTAR2 ENCODE chr11:102218133-102218194
64251 chr11 396945 396945 1 + C T rs576402184 396945 + 396925 396965 41 GCCTTTGGGGCCGCTGGGTACGGGGGTGCCCAGCCCACCCC GCCTTTGGGGCCGCTGGGTATGGGGGTGCCCAGCCCACCCC Direct Loss 0.976768569990205 0 0.96386933 0.950683 prediction 0.953537139980411 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:396945 chr11:396945 synonymous SNV . 0 21 hm5C_associated_SNPs_47143 0 0 4 AGGF1 POSTAR2 ENCODE chr11:396936-396962
64251 chr19 18499151 18499151 1 + C T rs1059022 18499151 + 18499131 18499171 41 ATCTCTCGGGCCGCCCTTCCCGAGGGGCTCCCCGAGGCCTC ATCTCTCGGGCCGCCCTTCCTGAGGGGCTCCCCGAGGCCTC Direct Loss 0.976751981544077 0 0.9654386 0.9552891 prediction 0.953503963088154 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499151 chr19:18499151 synonymous SNV . 0 21 hm5C_associated_SNPs_47144 0 0 9 BUD13 POSTAR2 ENCODE chr19:18499036-18499194
64251 chr16 57416244 57416244 1 + C T SKCM 57416244 + 57416224 57416264 41 GACGGGCGTGACTGGTTCCTCAGGGACCAGGCTCCCCCCGA GACGGGCGTGACTGGTTCCTTAGGGACCAGGCTCCCCCCGA Direct Loss 0.976711008793964 0 0.9341136 0.9158641 prediction 0.953422017587927 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416244 chr16:57416244 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47146 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416160-57416273
64251 chr11 67256782 67256782 1 + C T SKCM 67256782 + 67256762 67256802 41 GCCAAGAGTCTCCGCAACATCGCGGTGGGCAAGGACCCCCT GCCAAGAGTCTCCGCAACATTGCGGTGGGCAAGGACCCCCT Direct Loss 0.976702882291994 0 0.89253604 0.83700436 prediction 0.953405764583988 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67256782 chr11:67256782 synonymous SNV . 0 21 hm5C_associated_SNPs_47148 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr11:67256767-67256815
64251 chr10 8100451 8100451 1 + C T HNSC 8100451 + 8100431 8100471 41 GGCCTCGTCCTCCTCCTTGTCGGGGGGCCACGCCAGCCCGC GGCCTCGTCCTCCTCCTTGTTGGGGGGCCACGCCAGCCCGC Direct Loss 0.976690122746978 0 0.9697511 0.94633114 prediction 0.953380245493956 Functional Loss - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8100451 chr10:8100451 nonsynonymous SNV 0.548 1 21 hm5C_associated_SNPs_47150 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831619 chr10:8100440-8100460
64251 chr20 61442882 61442882 1 + C T UCEC 61442882 + 61442862 61442902 41 GAGCTCATGCTGGGCTTCTACGGGATCCGGCTGGAGGACCG GAGCTCATGCTGGGCTTCTATGGGATCCGGCTGGAGGACCG Direct Loss 0.976679901581202 0 0.8800378 0.7868799 prediction 0.953359803162404 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61442882 chr20:61442882 synonymous SNV . 0 21 hm5C_associated_SNPs_47151 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:61442864-61442890
64251 chr17 78219973 78219973 1 + C T UCEC 78219973 + 78219953 78219993 41 GACAGCCGTGAACGCTCAGTCGGGGGTGTGCACCCCGGCGG GACAGCCGTGAACGCTCAGTTGGGGGTGTGCACCCCGGCGG Direct Loss 0.976487499772932 0 0.9553478 0.9203006 prediction 0.952974999545865 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78219973 chr17:78219973 nonsynonymous SNV 0.594 4 21 hm5C_associated_SNPs_47159 0 0 2 PPIG POSTAR2 ENCODE chr17:78219951-78220003
64251 chr19 8550572 8550572 1 + C T rs76937953 8550572 + 8550552 8550592 41 GCCGGCATGGAGCGCATGGGCGCGGGCCTGGGCCACGGCAT GCCGGCATGGAGCGCATGGGTGCGGGCCTGGGCCACGGCAT Direct Loss 0.97645637566316 0 0.87091684 0.7824731 prediction 0.952912751326321 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550572 chr19:8550572 synonymous SNV . 0 21 hm5C_associated_SNPs_47160 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:8550487-8550594
64251 chr11 118889911 118889911 1 + C T rs139864805 118889911 + 118889891 118889931 41 AATGGCAGGTACACGGCCGACGGGAAAGAGGTGCTGGAGTA AATGGCAGGTACACGGCCGATGGGAAAGAGGTGCTGGAGTA Direct Loss 0.976426119146266 0 0.8759381 0.6944727 prediction 0.952852238292531 Functional Loss - TRAPPC4 ENSG00000196655 CDS Human protein_coding chr11:118889911 chr11:118889911 synonymous SNV . 0 21 hm5C_associated_SNPs_47162 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118889854-118889912
64251 chr21 38390425 38390425 1 + C T rs147162537 38390425 + 38390405 38390445 41 CAACCAAGGGCAGCGATCCTCAGGAGGGGGTGACCACTGGG CAACCAAGGGCAGCGATCCTTAGGAGGGGGTGACCACTGGG Direct Loss 0.976381236834761 0 0.94316304 0.92422515 prediction 0.952762473669521 Functional Loss - RIPPLY3 ENSG00000183145 CDS Human protein_coding chr21:38390425 chr21:38390425 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47164 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:38390415-38390451
64251 chr6 150070908 150070908 1 + C G rs575924664 150070908 + 150070888 150070928 41 AGCGGCGGCGACGGCAGTAACAGCGGCAGCTACAGCGGGGA AGCGGCGGCGACGGCAGTAAGAGCGGCAGCTACAGCGGGGA Direct Loss 0.976315887124942 0 0.8988038 0.86543524 prediction 0.952631774249885 Functional Loss - PCMT1 ENSG00000120265 CDS Human protein_coding chr6:150070908 chr6:150070908 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_47167 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:150070900-150070920
64251 chr10 54074385 54074385 1 + C A LUAD 54074385 + 54074365 54074405 41 CTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCCGGGCG CTCTGCAGTCAGCGCCGCGCAGGGAATCCTGTACCCGGGCG Direct Loss 0.976233316631566 0 0.879871 0.9012669 prediction 0.952466633263133 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074385 chr10:54074385 nonsynonymous SNV 0.330 2 21 hm5C_associated_SNPs_47170 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074360-54074400
64251 chr16 4382351 4382351 1 + C A rs34543395 4382351 + 4382331 4382371 41 TCCGGGCGGCAAGAGAGAAGCGGGAGAGGACGCTGGGTGTG TCCGGGCGGCAAGAGAGAAGAGGGAGAGGACGCTGGGTGTG Direct Loss 0.976171988014598 0 0.89743274 0.8310205 prediction 0.952343976029197 Functional Loss - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4382351 chr16:4382351 synonymous SNV . 0 21 hm5C_associated_SNPs_47174 2 0 2 YBX3 POSTAR2 ENCODE chr16:4382346-4382367
64251 chr6 27777959 27777959 1 + C T BLCA 27777959 + 27777939 27777979 41 GCTCCGGCCACCGGCGGTGTCAAGAAGCCCCATCGCTATCG GCTCCGGCCACCGGCGGTGTTAAGAAGCCCCATCGCTATCG Direct Loss 0.976170523755748 0 0.889964 0.8252816 prediction 0.952341047511496 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27777959 chr6:27777959 synonymous SNV . 0 21 hm5C_associated_SNPs_47175 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr1 156703888 156703888 1 + C T rs73000801 156703888 + 156703868 156703908 41 GTGAGGAGCTTCTGCTTCCACTGGAGAACCCGTGTCAGGGC GTGAGGAGCTTCTGCTTCCATTGGAGAACCCGTGTCAGGGC Direct Loss 0.976048407862913 0 0.24450949 0.20984167 prediction 0.952096815725825 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703888 chr1:156703888 synonymous SNV . 0 21 hm5C_associated_SNPs_47179 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:156703868-156703894
64251 chr19 58117412 58117412 1 + C T rs143267609 58117412 + 58117392 58117432 41 CCCTTCACGTTTGGGGAAGTCGGGAGGGACTTTTCAGCCAC CCCTTCACGTTTGGGGAAGTTGGGAGGGACTTTTCAGCCAC Direct Loss 0.975911661980596 0 0.9242685 0.75318915 prediction 0.951823323961192 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117412 chr19:58117412 synonymous SNV . 0 21 hm5C_associated_SNPs_47184 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58117397-58117426
64251 chr1 44437346 44437346 1 + C G BLCA 44437346 + 44437326 44437366 41 GTCCAGATACAGGGAAGACTCAGGATGAGGGTGCCCGGGCT GTCCAGATACAGGGAAGACTGAGGATGAGGGTGCCCGGGCT Direct Loss 0.975858048175525 0 0.90060437 0.56990564 prediction 0.95171609635105 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437346 chr1:44437346 nonsynonymous SNV 0.184 1 21 hm5C_associated_SNPs_47186 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44437331-44437362
64251 chr8 22447179 22447179 1 + C A UCEC 22447179 + 22447159 22447199 41 TCAAGATGCTGCAGGAAAATCGCGAGGGACGGGCGGCCCCC TCAAGATGCTGCAGGAAAATAGCGAGGGACGGGCGGCCCCC Direct Loss 0.975837184235461 0 0.8981024 0.41040763 prediction 0.951674368470923 Functional Loss - PDLIM2 ENSG00000120913;ENSG00000248235 CDS Human other chr8:22447179 chr8:22447179 nonsynonymous SNV 0.944 0 21 hm5C_associated_SNPs_47188 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:22447179-22447180
64251 chr1 26607289 26607289 1 + C A PAAD 26607289 + 26607269 26607309 41 AGAGCGAGGTGACCCGAATCCTGGATGGGAAGCGCATCCAA AGAGCGAGGTGACCCGAATCATGGATGGGAAGCGCATCCAA Direct Loss 0.975825604535047 0 0.39125675 0.30153307 prediction 0.951651209070094 Functional Loss - SH3BGRL3 ENSG00000142669 CDS Human protein_coding chr1:26607289 chr1:26607289 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_47189 0 0 5 DDX3X POSTAR2 ENCODE chr1:26607255-26607305
64251 chr20 30193328 30193328 1 + C G BLCA 30193328 + 30193308 30193348 41 GTGGCCATCTCGCGCTGCGCCGGGGGCGCCGGGGCGCGCCT GTGGCCATCTCGCGCTGCGCGGGGGGCGCCGGGGCGCGCCT Direct Loss 0.975766551318449 0 0.93958485 0.94127226 prediction 0.951533102636897 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193328 chr20:30193328 synonymous SNV . 0 21 hm5C_associated_SNPs_47190 0 0 11 ALKBH5 POSTAR2 GSE38201,GSM936506 chr20:30193316-30193336
64251 chr5 172110833 172110833 1 + C A rs142447086 172110833 + 172110813 172110853 41 CTTCGTGGAGGTGGGCCGTCCGGGGCTGGCGGCGCCCGGCG CTTCGTGGAGGTGGGCCGTCAGGGGCTGGCGGCGCCCGGCG Direct Loss 0.975744240654164 0 0.9251553 0.918496 prediction 0.951488481308328 Functional Loss - NEURL1B ENSG00000214357 CDS Human protein_coding chr5:172110833 chr5:172110833 nonsynonymous SNV 0.340 0 21 hm5C_associated_SNPs_47193 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:172110820-172110867
64251 chr5 121187857 121187857 1 + C T LUAD 121187857 + 121187837 121187877 41 GGCCCGCCGCCGGCCCCTCTCGGGTGCGCCAGAACTTCCAC GGCCCGCCGCCGGCCCCTCTTGGGTGCGCCAGAACTTCCAC Direct Loss 0.975737748858561 0 0.9656241 0.9507803 prediction 0.951475497717122 Functional Loss - FTMT ENSG00000181867 CDS Human protein_coding chr5:121187857 chr5:121187857 nonsynonymous SNV 0.145 3 21 hm5C_associated_SNPs_47194 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr5:121187840-121187860
64251 chr16 56966267 56966267 1 + C G CESC 56966267 + 56966247 56966287 41 GGCTGGAGTGTGGGCCACCTCAAGGCCCACCTGAGCCGCGT GGCTGGAGTGTGGGCCACCTGAAGGCCCACCTGAGCCGCGT Direct Loss 0.975706690020904 0 0.86656773 0.82362664 prediction 0.951413380041807 Functional Loss - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966267 chr16:56966267 synonymous SNV . 0 21 hm5C_associated_SNPs_47195 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56966231-56966267
64251 chr11 9492905 9492905 1 + C T SKCM 9492905 + 9492885 9492925 41 TCAGGGAATGACAGAGTTTCCTGGAGGAGGGATGGAGGCGC TCAGGGAATGACAGAGTTTCTTGGAGGAGGGATGGAGGCGC Direct Loss 0.975595427859115 0 0.74227977 0.89419997 prediction 0.95119085571823 Functional Loss - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9492905 chr11:9492905 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_47197 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:9492900-9492924
64251 chr2 220100508 220100508 1 + C T UCEC 220100508 + 220100488 220100528 41 AGAAGGCAGCCCGGCGGCAACGGGAGGAACAGCAGCAGAGG AGAAGGCAGCCCGGCGGCAATGGGAGGAACAGCAGCAGAGG Direct Loss 0.975546826638443 0 0.9076017 0.9067545 prediction 0.951093653276886 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220100508 chr2:220100508 nonsynonymous SNV 0.893 2 21 hm5C_associated_SNPs_47199 0 0 7 BUD13 POSTAR2 ENCODE chr2:220100482-220100548
64251 chr6 114181329 114181329 1 + C A rs45535333 114181329 + 114181309 114181349 41 GAGGCGCCCGCTGCCGAAGGCGGCAAGGACGAGGCCGCCGG GAGGCGCCCGCTGCCGAAGGAGGCAAGGACGAGGCCGCCGG Direct Loss 0.975469697146344 0 0.8853813 0.84548414 prediction 0.950939394292688 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181329 chr6:114181329 synonymous SNV . 0 21 hm5C_associated_SNPs_47202 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:114181279-114181332
64251 chr5 176863445 176863445 1 + C T UCEC 176863445 + 176863425 176863465 41 GGTGTCGTGGGGGCAGTGCCCGCGAGGTGAAGGAGCACCCC GGTGTCGTGGGGGCAGTGCCTGCGAGGTGAAGGAGCACCCC Direct Loss 0.975444767760867 0 0.76375663 0.39214948 prediction 0.950889535521733 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863445 chr5:176863445 nonsynonymous SNV 0.349 1 21 hm5C_associated_SNPs_47204 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176863389-176863453
64251 chr3 5024628 5024628 1 + C T SKCM 5024628 + 5024608 5024648 41 TGGCCAAGCACGAGAACACTCGGGACCTGAAGTCTTCGCAG TGGCCAAGCACGAGAACACTTGGGACCTGAAGTCTTCGCAG Direct Loss 0.975436493763851 0 0.9466542 0.92651343 prediction 0.950872987527702 Functional Loss - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5024628 chr3:5024628 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_47206 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:5024628-5024659
64251 chr1 156255142 156255142 1 + C T rs79735386 156255142 + 156255122 156255162 41 GGAAGGTGGGGCCGAATCCCCGGGAGCTGAGTCCCTCAGAG GGAAGGTGGGGCCGAATCCCTGGGAGCTGAGTCCCTCAGAG Direct Loss 0.975384818964718 0 0.90044045 0.86680555 prediction 0.950769637929436 Functional Loss - TMEM79 ENSG00000163472 CDS Human protein_coding chr1:156255142 chr1:156255142 nonsynonymous SNV 0.021 0 21 hm5C_associated_SNPs_47207 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:156255113-156255150
64251 chr18 657919 657919 1 + C T PAAD 657919 + 657899 657939 41 ACCGGCACCCTGTCGGTATTCGGCATGCAGGCGCGCTACAG ACCGGCACCCTGTCGGTATTTGGCATGCAGGCGCGCTACAG Direct Loss 0.975353783908018 0 0.5150913 0.30294597 prediction 0.950707567816035 Functional Loss - TYMS;TYMSOS ENSG00000176890;ENSG00000176912 CDS Human other chr18:657919 chr18:657919 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_47209 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819214 chr18:657860-657920
64251 chr9 130868675 130868675 1 + C T BRCA 130868675 + 130868655 130868695 41 GCGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGCGCCA GCGGAAGACAGGCCAGTACTTAGGAATGCTGGACTGCGCCA Direct Loss 0.975291156718893 0 0.90385044 0.84600115 prediction 0.950582313437787 Functional Loss - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868675 chr9:130868675 nonsynonymous SNV 0.957 0 21 hm5C_associated_SNPs_47214 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr9:130868675-130868696
64251 chr20 306839 306839 1 + C T BLCA 306839 + 306819 306859 41 CGGAGAAGATCCCGTTCGTGCGGGAGGCGGAGCGGCTGCGG CGGAGAAGATCCCGTTCGTGTGGGAGGCGGAGCGGCTGCGG Direct Loss 0.975247933838653 0 0.9041736 0.88800895 prediction 0.950495867677306 Functional Loss - SOX12 ENSG00000177732 CDS Human protein_coding chr20:306839 chr20:306839 nonsynonymous SNV 0.995 2 21 hm5C_associated_SNPs_47215 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:306800-306840
64251 chr20 60868966 60868966 1 + C G rs115390538 60868966 + 60868946 60868986 41 GCCTGGAGGGGCCTGGGGCCCGGGACCGGAGGCTGACGAGG GCCTGGAGGGGCCTGGGGCCGGGGACCGGAGGCTGACGAGG Direct Loss 0.975226554504031 0 0.9109963 0.92370284 prediction 0.950453109008061 Functional Loss - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60868966 chr20:60868966 nonsynonymous SNV 0.005 1 21 hm5C_associated_SNPs_47216 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60868961-60869001
64251 chr6 114181338 114181338 1 + C T STAD 114181338 + 114181318 114181358 41 GCTGCCGAAGGCGGCAAGGACGAGGCCGCCGGGGGCGCAGC GCTGCCGAAGGCGGCAAGGATGAGGCCGCCGGGGGCGCAGC Direct Loss 0.975204720831032 0 0.9087191 0.8937613 prediction 0.950409441662063 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181338 chr6:114181338 synonymous SNV . 0 21 hm5C_associated_SNPs_47217 0 0 3 RBM15 POSTAR2 ENCODE chr6:114181234-114181341
64251 chr6 43607888 43607888 1 + C T UCEC 43607888 + 43607868 43607908 41 CTTTGCACGGACACTAGTACCGCGAGTGCTGATTCTCCTTG CTTTGCACGGACACTAGTACTGCGAGTGCTGATTCTCCTTG Direct Loss 0.975190942853864 0 0.8605511 0.74893475 prediction 0.950381885707727 Functional Loss - MAD2L1BP ENSG00000124688 CDS Human protein_coding chr6:43607888 chr6:43607888 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_47218 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:43607860-43607889
64251 chr10 94452138 94452138 1 + C G LUAD 94452138 + 94452118 94452158 41 CTCGCAGGCAAACCTCTACTCTGGAGCCCCTTCTTGCAGAG CTCGCAGGCAAACCTCTACTGTGGAGCCCCTTCTTGCAGAG Direct Loss 0.975080490998085 0 0.76719326 0.38825256 prediction 0.950160981996171 Functional Loss - HHEX ENSG00000152804 CDS Human protein_coding chr10:94452138 chr10:94452138 synonymous SNV . 0 21 hm5C_associated_SNPs_47224 0 0 11 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:94452131-94452158
64251 chr7 140389471 140389471 1 + C A STAD 140389471 + 140389451 140389491 41 GACGTGGAGGGGTTCAAAACCGAGATGGCCATGCTGGTGAC GACGTGGAGGGGTTCAAAACAGAGATGGCCATGCTGGTGAC Direct Loss 0.975072937007822 0 0.85232544 0.86796415 prediction 0.950145874015645 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140389471 chr7:140389471 synonymous SNV . 0 21 hm5C_associated_SNPs_47225 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140389457-140389472
64251 chr11 107799382 107799382 1 + C A LIHC 107799382 + 107799362 107799402 41 GCCTCCTGCACCGCTTCACCCAGGGCCGCTTCCCCGGGCTG GCCTCCTGCACCGCTTCACCAAGGGCCGCTTCCCCGGGCTG Direct Loss 0.975066914367367 0 0.962747 0.93875587 prediction 0.950133828734734 Functional Loss - RAB39A ENSG00000179331 CDS Human protein_coding chr11:107799382 chr11:107799382 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_47226 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:107799357-107799384
64251 chr19 41265470 41265470 1 + C T COAD 41265470 + 41265450 41265490 41 ACCAAGAAGGCTGTGCAAGGCGGGGGAGCCACCCCCGTGGT ACCAAGAAGGCTGTGCAAGGTGGGGGAGCCACCCCCGTGGT Direct Loss 0.975005460791204 0 0.9182533 0.88719976 prediction 0.950010921582408 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41265470 chr19:41265470 synonymous SNV . 0 21 hm5C_associated_SNPs_47229 0 0 17 BUD13 POSTAR2 ENCODE chr19:41265448-41265499
64251 chr1 94057826 94057826 1 + C T LGG 94057826 + 94057806 94057846 41 GGACAAGACCAGGTACCTGTCGGGGGATGCGGCCGTGGTAC GGACAAGACCAGGTACCTGTTGGGGGATGCGGCCGTGGTAC Direct Loss 0.974955084440826 0 0.9553522 0.9169474 prediction 0.949910168881652 Functional Loss - BCAR3 ENSG00000137936 CDS Human protein_coding chr1:94057826 chr1:94057826 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_47231 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:94057802-94057831
64251 chr1 233497811 233497811 1 + C T COAD 233497811 + 233497791 233497831 41 TGTCGCAGGAGCTGCGATCCCGGGAAGAGGAGCTGACTCGG TGTCGCAGGAGCTGCGATCCTGGGAAGAGGAGCTGACTCGG Direct Loss 0.974948965613985 0 0.9050766 0.89494395 prediction 0.94989793122797 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233497811 chr1:233497811 nonsynonymous SNV 0.985 1 21 hm5C_associated_SNPs_47232 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233497795-233497822
64251 chr21 37507579 37507579 1 + C T HNSC 37507579 + 37507559 37507599 41 CGAACTGTGCCGACAGTTCTCTGGGGATGTGGTGCTCACCG CGAACTGTGCCGACAGTTCTTTGGGGATGTGGTGCTCACCG Direct Loss 0.974927402746488 0 0.9111743 0.9059149 prediction 0.949854805492976 Functional Loss - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37507579 chr21:37507579 nonsynonymous SNV 0.982 1 21 hm5C_associated_SNPs_47234 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:37507578-37507579
64251 chr12 96350699 96350699 1 + C T COAD 96350699 + 96350679 96350719 41 GCCCGGCGGGAGCTGGACATCGGCATCTCGGCTACCTACTG GCCCGGCGGGAGCTGGACATTGGCATCTCGGCTACCTACTG Direct Loss 0.974843300048791 0 0.68952197 0.36601257 prediction 0.949686600097581 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350699 chr12:96350699 synonymous SNV . 0 21 hm5C_associated_SNPs_47237 0 0 2 BUD13 POSTAR2 ENCODE chr12:96350674-96350768
64251 chr2 68385189 68385189 1 + C T GBM 68385189 + 68385169 68385209 41 CTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGA CTGTCCGCAGCAGGAGAGGGTGGGGATGCGGGCCGCATGGA Direct Loss 0.974835429843852 0 0.9127034 0.8710667 prediction 0.949670859687703 Functional Loss - PNO1 ENSG00000115946;ENSG00000273398 CDS Human other chr2:68385189 chr2:68385189 synonymous SNV . 0 21 hm5C_associated_SNPs_47240 0 0 6 DROSHA POSTAR2 ENCODE chr2:68385137-68385246
64251 chr7 152161688 152161688 1 + C G rs10238425 152161688 + 152161668 152161708 41 AGTGGGGAGCCGGGAGGAACCTGGCGCCGGCACCCACCCGC AGTGGGGAGCCGGGAGGAACGTGGCGCCGGCACCCACCCGC Direct Loss 0.974811553306041 0 0.8976393 0.89697814 prediction 0.949623106612081 Functional Loss - LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161688 chr7:152161688 . . 0 21 hm5C_associated_SNPs_47241 0 0 3 DDX3X POSTAR2 ENCODE chr7:152161596-152161694
64251 chr3 139063000 139063000 1 + C G CESC 139063000 + 139062980 139063020 41 CAACCGCTACCTTGCTCTTTCGAGATGGGGCTGCCACGCCG CAACCGCTACCTTGCTCTTTGGAGATGGGGCTGCCACGCCG Direct Loss 0.974729744703731 0 0.95111316 0.9293251 prediction 0.949459489407461 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139063000 chr3:139063000 nonsynonymous SNV 0.005 0 21 hm5C_associated_SNPs_47246 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr3:139062987-139063001
64251 chr19 8550545 8550545 1 + C T UCEC 8550545 + 8550525 8550565 41 GGTCCTGGCATTGACCGCCTCGGGGGTGCCGGCATGGAGCG GGTCCTGGCATTGACCGCCTTGGGGGTGCCGGCATGGAGCG Direct Loss 0.974692939598518 0 0.9320346 0.7841723 prediction 0.949385879197036 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550545 chr19:8550545 synonymous SNV . 0 21 hm5C_associated_SNPs_47248 0 0 36 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:8550487-8550594
64251 chr1 235597533 235597533 1 + C T UCEC 235597533 + 235597513 235597553 41 TTCCAGGTGCTGCGGTGTGTCGCGGGGTGCCCAGGCCTGGA TTCCAGGTGCTGCGGTGTGTTGCGGGGTGCCCAGGCCTGGA Direct Loss 0.974678476999388 0 0.91008073 0.7085371 prediction 0.949356953998776 Functional Loss - TBCE ENSG00000116957 CDS Human protein_coding chr1:235597533 chr1:235597533 synonymous SNV . 0 21 hm5C_associated_SNPs_47250 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:235597520-235597540
64251 chr1 154296202 154296202 1 + C T STAD 154296202 + 154296182 154296222 41 TTATCCATGGGTGCCAACTGCGGGATTCCACTCAACCCTGC TTATCCATGGGTGCCAACTGTGGGATTCCACTCAACCCTGC Direct Loss 0.974672466811784 0 0.91197467 0.8781197 prediction 0.949344933623568 Functional Loss - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154296202 chr1:154296202 synonymous SNV . 0 21 hm5C_associated_SNPs_47251 0 0 1 DDX24 POSTAR2 ENCODE chr1:154296160-154296223
64251 chr11 45949777 45949777 1 + C T STAD 45949777 + 45949757 45949797 41 CCACAGACTATGCCCGCTGGCGGGAGGCTCAGGCCCCGTAC CCACAGACTATGCCCGCTGGTGGGAGGCTCAGGCCCCGTAC Direct Loss 0.974562652938415 0 0.9422135 0.91594017 prediction 0.94912530587683 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949777 chr11:45949777 nonsynonymous SNV 0.951 4 21 hm5C_associated_SNPs_47256 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:45949760-45949815
64251 chrX 102632525 102632525 1 + C T SKCM 102632525 + 102632505 102632545 41 GCCACCAGCCTGCAGGAAATCGACGGGGACAGGCTCGCCGA GCCACCAGCCTGCAGGAAATTGACGGGGACAGGCTCGCCGA Direct Loss 0.974555216832713 0 0.8654676 0.381416 prediction 0.949110433665427 Functional Loss - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632525 chrX:102632525 stopgain 0.927 1 21 hm5C_associated_SNPs_47258 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:102632496-102632544
64251 chrX 68049093 68049093 1 + C T rs751999363 68049093 + 68049073 68049113 41 GCTGTCCGGGGGCGCGTAGCCCGGAGTCCCAGTGTGGCCCG GCTGTCCGGGGGCGCGTAGCTCGGAGTCCCAGTGTGGCCCG Direct Loss 0.974535343649604 0 0.9163495 0.9205637 prediction 0.949070687299209 Functional Loss - EFNB1 ENSG00000090776 UTR5 Human protein_coding chrX:68049093 chrX:68049093 . . 0 21 hm5C_associated_SNPs_47260 0 0 2 DDX3X POSTAR2 ENCODE chrX:68049081-68049165
64251 chr6 114181358 114181358 1 + C T rs374780311 114181358 + 114181338 114181378 41 CGAGGCCGCCGGGGGCGCAGCTGCGGCCGCCGCCGAGGCGG CGAGGCCGCCGGGGGCGCAGTTGCGGCCGCCGCCGAGGCGG Direct Loss 0.974488208503351 0 0.7408581 0.8035041 prediction 0.948976417006702 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181358 chr6:114181358 nonsynonymous SNV 0.004 0 21 hm5C_associated_SNPs_47262 0 0 2 RPS3 POSTAR2 ENCODE chr6:114181292-114181424
64251 chr18 22006711 22006711 1 + C T rs369080399 22006711 + 22006691 22006731 41 CGGCGGCTGCAGGGCAGGTCCAGGGGCCACATGGCTGAGGG CGGCGGCTGCAGGGCAGGTCTAGGGGCCACATGGCTGAGGG Direct Loss 0.974452626649645 0 0.901204 0.8727727 prediction 0.94890525329929 Functional Loss - IMPACT ENSG00000154059 UTR5 Human protein_coding chr18:22006711 chr18:22006711 . . 0 21 hm5C_associated_SNPs_47267 0 0 1 DDX3X POSTAR2 ENCODE chr18:22006670-22006757
64251 chr11 35684686 35684686 1 + C T LUSC 35684686 + 35684666 35684706 41 TCTGGAGTGGGCGCGGCCTTCGAGGAACTGCCTCACGACGG TCTGGAGTGGGCGCGGCCTTTGAGGAACTGCCTCACGACGG Direct Loss 0.97438337725322 0 0.887131 0.63929605 prediction 0.948766754506441 Functional Loss - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684686 chr11:35684686 synonymous SNV . 0 21 hm5C_associated_SNPs_47268 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:35684652-35684687
64251 chr14 73570071 73570071 1 + C T COAD 73570071 + 73570051 73570091 41 AACGGGAGCGGGAACGAGAACGGGATAGGGACCGTGACCGG AACGGGAGCGGGAACGAGAATGGGATAGGGACCGTGACCGG Direct Loss 0.97436441343017 0 0.868242 0.7121458 prediction 0.94872882686034 Functional Loss - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73570071 chr14:73570071 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47269 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr14:73570012-73570177
64251 chrX 30237469 30237469 1 + C A UCEC 30237469 + 30237449 30237489 41 ATCTGGTGCAGGAAAAATATCTGGAGTACAAGCAGGTGCCC ATCTGGTGCAGGAAAAATATATGGAGTACAAGCAGGTGCCC Direct Loss 0.974340124688677 0 0.5419228 0.16657573 prediction 0.948680249377354 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237469 chrX:30237469 nonsynonymous SNV 0.384 4 21 hm5C_associated_SNPs_47270 0 0 3 LIN28B POSTAR2 ENCODE chrX:30237462-30237494
64251 chr13 111371617 111371617 1 + C T UCEC 111371617 + 111371597 111371637 41 AGTGCTACGAGCGCTTCAGTCGCGAGACAGACGGGGCGCAG AGTGCTACGAGCGCTTCAGTTGCGAGACAGACGGGGCGCAG Direct Loss 0.974329734788571 0 0.86141366 0.48015922 prediction 0.948659469577142 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371617 chr13:111371617 nonsynonymous SNV 0.022 4 21 hm5C_associated_SNPs_47271 0 0 1 BUD13 POSTAR2 ENCODE chr13:111371528-111371620
64251 chr7 106508995 106508995 1 + C T rs62001906 106508995 + 106508975 106509015 41 GCCACTGGTGGATGACTGCACGGGAGTCACCGGCTACCATG GCCACTGGTGGATGACTGCATGGGAGTCACCGGCTACCATG Direct Loss 0.974323801276984 0 0.8244891 0.3897267 prediction 0.948647602553968 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508995 chr7:106508995 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_47272 0 0 1 FXR2 POSTAR2 ENCODE chr7:106508931-106508996
64251 chr2 20647241 20647241 1 + C T rs7043 20647241 + 20647221 20647261 41 CCGCTCATGGCGGCCATCCGCAAGAAGCTGGTGGTGGTGGG CCGCTCATGGCGGCCATCCGTAAGAAGCTGGTGGTGGTGGG Direct Loss 0.974323396369654 0 0.84615445 0.7832828 prediction 0.948646792739309 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647241 chr2:20647241 synonymous SNV . 0 21 hm5C_associated_SNPs_47273 0 0 14 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:20647233-20647244
64251 chr19 17873655 17873655 1 + C T UCEC 17873655 + 17873635 17873675 41 AGGAGCTGGCGGACTTCATCCGGGAGAGGTGAGGTCCCCAA AGGAGCTGGCGGACTTCATCTGGGAGAGGTGAGGTCCCCAA Direct Loss 0.974319891454648 0 0.9373492 0.93338263 prediction 0.948639782909295 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17873655 chr19:17873655 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_47274 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:17873640-17873660
64251 chr4 1809378 1809378 1 + C A rs551739335 1809378 + 1809358 1809398 41 CTTTGCACCACGGGACATCACAGGGTGGGCCTCGGCCCCTC CTTTGCACCACGGGACATCAAAGGGTGGGCCTCGGCCCCTC Direct Loss 0.974273397637176 0 0.9406085 0.92023385 prediction 0.948546795274352 Functional Loss - FGFR3 ENSG00000068078 UTR3 Human protein_coding chr4:1809378 chr4:1809378 . . 0 21 hm5C_associated_SNPs_47278 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:1809360-1809380
64251 chr4 38690545 38690545 1 + C T STAD 38690545 + 38690525 38690565 41 TGATGGCAGCTGCCCTCTCGCGGCATGGAATACGGAGCCCG TGATGGCAGCTGCCCTCTCGTGGCATGGAATACGGAGCCCG Direct Loss 0.974265984699178 0 0.90423584 0.8924945 prediction 0.948531969398356 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690545 chr4:38690545 nonsynonymous SNV 0.038 3 21 hm5C_associated_SNPs_47279 0 0 6 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:38690545-38690546
64251 chr16 84691083 84691083 1 + C T COAD 84691083 + 84691063 84691103 41 GGCTGACGCAGCAGCCCGAGCGCGAGGCCCACGCCCGCCAG GGCTGACGCAGCAGCCCGAGTGCGAGGCCCACGCCCGCCAG Direct Loss 0.97422536811381 0 0.93329656 0.9124929 prediction 0.948450736227619 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84691083 chr16:84691083 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_47282 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:84691073-84691110
64251 chr17 61907223 61907223 1 + C T LUSC 61907223 + 61907203 61907243 41 GCCATCTAGTTCGCCTATTGCGGGAGGAGCTACAGCTGCTG GCCATCTAGTTCGCCTATTGTGGGAGGAGCTACAGCTGCTG Direct Loss 0.974172512499803 0 0.92593396 0.898916 prediction 0.948345024999605 Functional Loss - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907223 chr17:61907223 nonsynonymous SNV 0.996 3 21 hm5C_associated_SNPs_47284 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:61907209-61907229
64251 chr7 142962141 142962141 1 + C A CESC 142962141 + 142962121 142962161 41 ACTTGGAGCATCCAGAGATGCTGGAGAAAGCGTCCCGGGAG ACTTGGAGCATCCAGAGATGATGGAGAAAGCGTCCCGGGAG Direct Loss 0.974165811422641 0 0.8282771 0.80688965 prediction 0.948331622845281 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962141 chr7:142962141 nonsynonymous SNV 0.962 3 21 hm5C_associated_SNPs_47285 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:142962140-142962141
64251 chr6 114181628 114181628 1 + C T STAD 114181628 + 114181608 114181648 41 CGCCGGGCCCGGCGCGCCCCCGGAGCAGGAGGCAGCCCCCG CGCCGGGCCCGGCGCGCCCCTGGAGCAGGAGGCAGCCCCCG Direct Loss 0.974057382281234 0 0.9118534 0.9003084 prediction 0.948114764562469 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181628 chr6:114181628 nonsynonymous SNV 0.064 0 21 hm5C_associated_SNPs_47292 0 0 1 RPS3 POSTAR2 ENCODE chr6:114181572-114181641
64251 chr19 38755600 38755600 1 + C G CESC 38755600 + 38755580 38755620 41 GCTGGGATCGCTGCTCCTCTCTGGGGTCCTGGCGGCCGACC GCTGGGATCGCTGCTCCTCTGTGGGGTCCTGGCGGCCGACC Direct Loss 0.973979440832467 0 0.9000498 0.5727608 prediction 0.947958881664933 Functional Loss - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38755600 chr19:38755600 nonsynonymous SNV 0.384 0 21 hm5C_associated_SNPs_47296 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38755540-38755620
64251 chr4 17608478 17608478 1 + C T CESC 17608478 + 17608458 17608498 41 ATTGAAACAGGGGACCGTGTCTGGAGGATGCCTCTCTTCGA ATTGAAACAGGGGACCGTGTTTGGAGGATGCCTCTCTTCGA Direct Loss 0.973916756834835 0 0.8468182 0.5204057 prediction 0.947833513669669 Functional Loss - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17608478 chr4:17608478 synonymous SNV . 0 21 hm5C_associated_SNPs_47300 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr4:17608473-17608501
64251 chr19 50155936 50155936 1 + C T UCEC 50155936 + 50155916 50155956 41 CCTCCTCCTCCTCCTCTTCCCGGGAGAAGGGGTCTCGTCGG CCTCCTCCTCCTCCTCTTCCTGGGAGAAGGGGTCTCGTCGG Direct Loss 0.97389567672418 0 0.9342061 0.91088927 prediction 0.94779135344836 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155936 chr19:50155936 nonsynonymous SNV 0.364 3 21 hm5C_associated_SNPs_47301 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50155904-50156014
64251 chr16 842518 842518 1 + C T rs35387463 842518 + 842498 842538 41 ACAGGGCCCGGCTGTGCCTTCGGGAGGCGGCCGACGGCGCC ACAGGGCCCGGCTGTGCCTTTGGGAGGCGGCCGACGGCGCC Direct Loss 0.973840611474947 0 0.9126345 0.89000165 prediction 0.947681222949894 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842518 chr16:842518 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47305 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr15 40675518 40675518 1 + C T LUAD 40675518 + 40675498 40675538 41 TGCGCTGAGCGGCGGCCAGCCGGCAGGTGAGGGTCCAAGCC TGCGCTGAGCGGCGGCCAGCTGGCAGGTGAGGGTCCAAGCC Direct Loss 0.973840439697852 0 0.91110885 0.7598267 prediction 0.947680879395704 Functional Loss - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40675518 chr15:40675518 nonsynonymous SNV 0.641 1 21 hm5C_associated_SNPs_47306 0 0 3 DDX3X POSTAR2 ENCODE chr15:40675464-40675524
64251 chr13 79980452 79980452 1 + C G rs74100220 79980452 + 79980432 79980472 41 CGTAAGGTCGGCGGAGAATGCGCGGGTCGAGTGCTGTAGTT CGTAAGGTCGGCGGAGAATGGGCGGGTCGAGTGCTGTAGTT Direct Loss 0.973651201852928 0 0.87189436 0.8790783 prediction 0.947302403705855 Functional Loss - RBM26-AS1 ENSG00000227354 ncRNA_exonic Human antisense chr13:79980452 chr13:79980452 . . 0 21 hm5C_associated_SNPs_47311 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr13:79980425-79980467
64251 chr8 28827820 28827820 1 + C T COAD 28827820 + 28827800 28827840 41 TTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTA TTCCACACAGACGCAGCATTTGGGAATGTCCCCGTCACCTA Direct Loss 0.97363128986867 0 0.90028286 0.35292858 prediction 0.94726257973734 Functional Loss - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28827820 chr8:28827820 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_47312 0 0 1 YBX3 POSTAR2 ENCODE chr8:28827759-28827832
64251 chr14 31091558 31091558 1 + C T KIRP 31091558 + 31091538 31091578 41 AGCCAAGATGGCGGCGGCGGCGGCAGCGACAGCAGCAGCAG AGCCAAGATGGCGGCGGCGGTGGCAGCGACAGCAGCAGCAG Direct Loss 0.973614439922611 0 0.8906857 0.8125291 prediction 0.947228879845222 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31091558 chr14:31091558 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_47315 0 0 5 DDX3X POSTAR2 ENCODE chr14:31091528-31091586
64251 chr7 99956578 99956578 1 + C T LUSC 99956578 + 99956558 99956598 41 GGTCAGGAGAGCGGCTTCCTCAGGATCTCAAACCTGCGGAA GGTCAGGAGAGCGGCTTCCTTAGGATCTCAAACCTGCGGAA Direct Loss 0.973580755682638 0 0.88887286 0.7513969 prediction 0.947161511365275 Functional Loss - PILRB ENSG00000121716 CDS Human protein_coding chr7:99956578 chr7:99956578 stopgain 0.022 0 21 hm5C_associated_SNPs_47316 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:99956553-99956580
64251 chr3 142840375 142840375 1 + C T COAD 142840375 + 142840355 142840395 41 TTGTATAGCCCCGCGGGCAGCGGGGGGCGCAACCTCACCAC TTGTATAGCCCCGCGGGCAGTGGGGGGCGCAACCTCACCAC Direct Loss 0.973549393532218 0 0.9397428 0.92303306 prediction 0.947098787064436 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840375 chr3:142840375 synonymous SNV . 0 21 hm5C_associated_SNPs_47318 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:142840341-142840393
64251 chr6 114181346 114181346 1 + C A LUAD 114181346 + 114181326 114181366 41 AGGCGGCAAGGACGAGGCCGCCGGGGGCGCAGCTGCGGCCG AGGCGGCAAGGACGAGGCCGACGGGGGCGCAGCTGCGGCCG Direct Loss 0.973517355719096 0 0.9136657 0.90769374 prediction 0.947034711438192 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181346 chr6:114181346 nonsynonymous SNV 0.774 0 21 hm5C_associated_SNPs_47321 0 0 2 RPS3 POSTAR2 ENCODE chr6:114181292-114181424
64251 chr15 63569813 63569813 1 + C A rs189409411 63569813 + 63569793 63569833 41 CGGGCCCCCGGGTCGGTTTCCGCGGTGGCCATGACTGCGGC CGGGCCCCCGGGTCGGTTTCAGCGGTGGCCATGACTGCGGC Direct Loss 0.973474160695232 0 0.92168427 0.91988635 prediction 0.946948321390463 Functional Loss - APH1B ENSG00000138613 UTR5 Human protein_coding chr15:63569813 chr15:63569813 . . 0 21 hm5C_associated_SNPs_47325 0 0 1 DDX3X POSTAR2 ENCODE chr15:63569804-63569891
64251 chr6 26157013 26157013 1 + C T UCEC 26157013 + 26156993 26157033 41 GGCCAAGGCCAAGAAGCCAGCAGGAGCGGCGAAGAAGCCCA GGCCAAGGCCAAGAAGCCAGTAGGAGCGGCGAAGAAGCCCA Direct Loss 0.973468244075002 0 0.7430124 0.54939175 prediction 0.946936488150003 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26157013 chr6:26157013 nonsynonymous SNV 0.004 0 21 hm5C_associated_SNPs_47326 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156940-26157180
64251 chr19 49379062 49379062 1 + C G HNSC 49379062 + 49379042 49379082 41 GCCAGAGCCTGGGCACGCCTCAGGAACCCACCTTTAGCCCC GCCAGAGCCTGGGCACGCCTGAGGAACCCACCTTTAGCCCC Direct Loss 0.973447199204842 0 0.91650105 0.760977 prediction 0.946894398409684 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49379062 chr19:49379062 synonymous SNV . 0 21 hm5C_associated_SNPs_47328 0 0 1 DDX55 POSTAR2 ENCODE chr19:49379004-49379063
64251 chr3 4345184 4345184 1 + C T rs60314351 4345184 + 4345164 4345204 41 TGCCGGTGGGCGCGTGGCCCCCGGGGGCCGCGCCGGCGCCC TGCCGGTGGGCGCGTGGCCCTCGGGGGCCGCGCCGGCGCCC Direct Loss 0.973426654094664 0 0.9031975 0.9206637 prediction 0.946853308189328 Functional Loss - SETMAR ENSG00000170364 CDS Human protein_coding chr3:4345184 chr3:4345184 nonsynonymous SNV 0.028 0 21 hm5C_associated_SNPs_47330 0 0 2 PRPF8 POSTAR2 ENCODE chr3:4345157-4345256
64251 chrX 38664370 38664370 1 + C T CESC 38664370 + 38664350 38664390 41 GATGTTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGGA GATGTTGGCGTGGAGGTAGGTGGCAGTGGCGGCTGCCTGGA Direct Loss 0.973420129377384 0 0.90392286 0.8644904 prediction 0.946840258754767 Functional Loss - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664370 chrX:38664370 synonymous SNV . 0 21 hm5C_associated_SNPs_47331 0 0 5 GEMIN5 POSTAR2 ENCODE chrX:38664359-38664391
64251 chr4 151504852 151504852 1 + C T COAD 151504852 + 151504832 151504872 41 GCTGACCGGCAAGCAGAGCTCGGCAGAGAGCGACGCCTGGG GCTGACCGGCAAGCAGAGCTTGGCAGAGAGCGACGCCTGGG Direct Loss 0.973326204793019 0 0.8834141 0.39072752 prediction 0.946652409586038 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504852 chr4:151504852 nonsynonymous SNV 0.987 2 21 hm5C_associated_SNPs_47340 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr4:151504833-151504869
64251 chr22 42475829 42475829 1 + C T BLCA 42475829 + 42475809 42475849 41 CCCGTCAGGTCCGGGGCTCTCCGGAGCGGGCCTAGCTTGAG CCCGTCAGGTCCGGGGCTCTTCGGAGCGGGCCTAGCTTGAG Direct Loss 0.973283517820029 0 0.86649185 0.88552123 prediction 0.946567035640058 Functional Loss - SMDT1 ENSG00000183172 CDS Human protein_coding chr22:42475829 chr22:42475829 synonymous SNV . 0 21 hm5C_associated_SNPs_47344 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr22:42475798-42475852
64251 chr20 57598917 57598917 1 + C T COAD 57598917 + 57598897 57598937 41 CTGGGCGGGGGCACAGGCTCCGGGATGGGCACTCTGCTCAT CTGGGCGGGGGCACAGGCTCTGGGATGGGCACTCTGCTCAT Direct Loss 0.973276904972915 0 0.9003008 0.89240175 prediction 0.94655380994583 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598917 chr20:57598917 synonymous SNV . 0 21 hm5C_associated_SNPs_47345 0 0 2 BUD13 POSTAR2 ENCODE chr20:57598865-57598921
64251 chr5 179264579 179264579 1 + C A UCEC 179264579 + 179264559 179264599 41 GGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGC GGCCCGAGGAAGCTGGACAGAGGCAGTGGGCCTGCTGAGGC Direct Loss 0.973249562104679 0 0.8732004 0.8536464 prediction 0.946499124209358 Functional Loss - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264579 chr5:179264579 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_47348 0 0 3 HNRNPM POSTAR2 ENCODE chr5:179264538-179264599
64251 chr19 1440079 1440079 1 + C T UCEC 1440079 + 1440059 1440099 41 GGCTGAACCGGGGCCTGCGGCGGAAGCAGCACTCCCTGCTG GGCTGAACCGGGGCCTGCGGTGGAAGCAGCACTCCCTGCTG Direct Loss 0.973212564780408 0 0.9181402 0.89050716 prediction 0.946425129560817 Functional Loss - RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440079 chr19:1440079 nonsynonymous SNV 0.968 0 21 hm5C_associated_SNPs_47351 0 0 1 DDX55 POSTAR2 ENCODE chr19:1440079-1440108
64251 chr7 155090019 155090019 1 + C T BLCA 155090019 + 155089999 155090039 41 CCCAGATTGCACGACCACTTCTGGAGCTGCTCCTGTGCGCA CCCAGATTGCACGACCACTTTTGGAGCTGCTCCTGTGCGCA Direct Loss 0.973199543669681 0 0.59157985 0.8093127 prediction 0.946399087339362 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090019 chr7:155090019 synonymous SNV . 0 21 hm5C_associated_SNPs_47352 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:155089960-155090020
64251 chr15 91500425 91500425 1 + C T CESC 91500425 + 91500405 91500445 41 TGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCC TGGGCCTCGGAGGGGCTCCTTGCGGTGCTGCGCGCCGGGCC Direct Loss 0.973196086294514 0 0.8895544 0.86396825 prediction 0.946392172589028 Functional Loss - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91500425 chr15:91500425 synonymous SNV . 0 21 hm5C_associated_SNPs_47353 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:91500402-91500428
64251 chr1 1431369 1431369 1 + C T rs140821046 1431369 + 1431349 1431389 41 GGCAGAAGGAGTGGGGCAGGCGGGGTCTTTGTTCTCGGCTC GGCAGAAGGAGTGGGGCAGGTGGGGTCTTTGTTCTCGGCTC Direct Loss 0.973189254303562 0 0.90885556 0.8931736 prediction 0.946378508607124 Functional Loss - ATAD3B ENSG00000160072 UTR3 Human protein_coding chr1:1431369 chr1:1431369 . . 0 21 hm5C_associated_SNPs_47354 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:1431353-1431379
64251 chr8 146278000 146278000 1 + C T rs139779460 146278000 + 146277980 146278020 41 ACATCTTGCTGGGGAGGCAGCGGCGGCCCCAGGCCCGGGTA ACATCTTGCTGGGGAGGCAGTGGCGGCCCCAGGCCCGGGTA Direct Loss 0.973105147019839 0 0.93848634 0.90595436 prediction 0.946210294039679 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278000 chr8:146278000 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_47362 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:146277953-146278027
64251 chr15 71300833 71300833 1 + C T SKCM 71300833 + 71300813 71300853 41 GCTCAGGAGCACTGGAATCTCTGGATAGGAATTGGAGTGTT GCTCAGGAGCACTGGAATCTTTGGATAGGAATTGGAGTGTT Direct Loss 0.973095279044159 0 0.40877476 0.27165377 prediction 0.946190558088318 Functional Loss - LRRC49 ENSG00000137821 CDS Human protein_coding chr15:71300833 chr15:71300833 synonymous SNV . 0 21 hm5C_associated_SNPs_47364 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:71300814-71300834
64251 chr1 11808642 11808642 1 + C T COAD 11808642 + 11808622 11808662 41 TACCACATGTACCGGGAGCGCGGGGGTGAGCTCCTGGTCCA TACCACATGTACCGGGAGCGTGGGGGTGAGCTCCTGGTCCA Direct Loss 0.973082691188369 0 0.94610596 0.92624635 prediction 0.946165382376737 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808642 chr1:11808642 nonsynonymous SNV 0.878 1 21 hm5C_associated_SNPs_47365 0 0 3 SND1 POSTAR2 ENCODE chr1:11808579-11808668
64251 chr8 20054936 20054936 1 + C G PAAD 20054936 + 20054916 20054956 41 AGATGGCGCTGCGGGCGATGCGGGGGATTGTCAACGGGGCC AGATGGCGCTGCGGGCGATGGGGGGGATTGTCAACGGGGCC Direct Loss 0.973053864824503 0 0.90690804 0.90586823 prediction 0.946107729649007 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20054936 chr8:20054936 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_47369 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:20054915-20054941
64251 chr3 129023621 129023621 1 + C A READ 129023621 + 129023601 129023641 41 TCCTAGAGCAATGGCTGAAGCGGGAGAAGGAGGAGGAACCT TCCTAGAGCAATGGCTGAAGAGGGAGAAGGAGGAGGAACCT Direct Loss 0.973019638472425 0 0.91565895 0.890151 prediction 0.94603927694485 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:129023621 chr3:129023621 synonymous SNV . 0 21 hm5C_associated_SNPs_47374 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:129023618-129023663
64251 chr19 1434806 1434806 1 + C T STAD 1434806 + 1434786 1434826 41 AGCCAGCAGCCTCCTTCCTACGGGGGTCCCTCCGTGCCAGG AGCCAGCAGCCTCCTTCCTATGGGGGTCCCTCCGTGCCAGG Direct Loss 0.972986176483532 0 0.93506676 0.91508496 prediction 0.945972352967065 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434806 chr19:1434806 synonymous SNV . 0 21 hm5C_associated_SNPs_47376 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chrX 118708868 118708868 1 + C T DLBC 118708868 + 118708848 118708888 41 GTCTGTCTTCCCGAAGGTTGCAGGAGGATCCTCCAGCCGGA GTCTGTCTTCCCGAAGGTTGTAGGAGGATCCTCCAGCCGGA Direct Loss 0.972918815761479 0 0.9427378 0.92630273 prediction 0.945837631522958 Functional Loss - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118708868 chrX:118708868 stopgain 0.988 1 21 hm5C_associated_SNPs_47377 0 0 8 U2AF2 POSTAR2 GSE83923,CSM2221662 chrX:118708867-118708868
64251 chr2 74757166 74757166 1 + C A GBM 74757166 + 74757146 74757186 41 AGGGCGGGGCGGGGTGCAGGCTGGAGCCTTCGGGCATGGCG AGGGCGGGGCGGGGTGCAGGATGGAGCCTTCGGGCATGGCG Direct Loss 0.972852370562461 0 0.66574836 0.5665 prediction 0.945704741124921 Functional Loss - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757166 chr2:74757166 synonymous SNV . 0 21 hm5C_associated_SNPs_47380 0 0 3 DDX3X POSTAR2 ENCODE chr2:74757119-74757243
64251 chr14 23303981 23303981 1 + C T rs61608320 23303981 + 23303961 23304001 41 GCAGGAGAATCGCTTAAACTCGGGAGGTAGAGGTTGCAGTG GCAGGAGAATCGCTTAAACTTGGGAGGTAGAGGTTGCAGTG Direct Loss 0.97283743549098 0 0.95022804 0.93888646 prediction 0.945674870981959 Functional Loss - MRPL52 ENSG00000172590 UTR3 Human protein_coding chr14:23303981 chr14:23303981 . . 0 21 hm5C_associated_SNPs_47381 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:23303975-23304005
64251 chr15 44829397 44829397 1 + C A LUAD 44829397 + 44829377 44829417 41 TCACACCCGGCTCGAGATGGCGGCGGCGGCGGCGGCGGCGG TCACACCCGGCTCGAGATGGAGGCGGCGGCGGCGGCGGCGG Direct Loss 0.972815703367696 0 0.8988979 0.8979825 prediction 0.945631406735392 Functional Loss - EIF3J ENSG00000104131 CDS Human protein_coding chr15:44829397 chr15:44829397 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_47382 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:44829392-44829424
64251 chrX 102632528 102632528 1 + C A HNSC 102632528 + 102632508 102632548 41 ACCAGCCTGCAGGAAATCGACGGGGACAGGCTCGCCGACTT ACCAGCCTGCAGGAAATCGAAGGGGACAGGCTCGCCGACTT Direct Loss 0.972800670619791 0 0.9271346 0.9316721 prediction 0.945601341239583 Functional Loss - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632528 chrX:102632528 synonymous SNV . 0 21 hm5C_associated_SNPs_47383 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:102632496-102632544
64251 chr7 150034401 150034401 1 + C T UCEC 150034401 + 150034381 150034421 41 CCTCCTACTGGGCTGCAGTCCGGGAGCTGCTGCCTGGCCTG CCTCCTACTGGGCTGCAGTCTGGGAGCTGCTGCCTGGCCTG Direct Loss 0.972764044499755 0 0.92169744 0.89869976 prediction 0.945528088999511 Functional Loss - LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034401 chr7:150034401 nonsynonymous SNV 0.943 0 21 hm5C_associated_SNPs_47386 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:150034400-150034401
64251 chr1 234509472 234509472 1 + C T SKCM 234509472 + 234509452 234509492 41 GCGCGCGTGGACTATGGGCCCGGGAGGTCCCTTACTGTCCC GCGCGCGTGGACTATGGGCCTGGGAGGTCCCTTACTGTCCC Direct Loss 0.972706202139089 0 0.8994763 0.8758017 prediction 0.945412404278178 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234509472 chr1:234509472 nonsynonymous SNV 0.120 1 21 hm5C_associated_SNPs_47391 0 0 2 BUD13 POSTAR2 ENCODE chr1:234509403-234509485
64251 chr3 101395563 101395563 1 - G A rs61735374 101395563 - 101395543 101395583 41 TCGCGGAGCTGGAGGTGGTGCTGCAGCCGGAGCGACGCCGG TCGCGGAGCTGGAGGTGGTGTTGCAGCCGGAGCGACGCCGG Direct Loss 0.972673127693836 0 0.70829564 0.5604973 prediction 0.945346255387672 Functional Loss - ZBTB11 ENSG00000066422 CDS Human protein_coding chr3:101395563 chr3:101395563 synonymous SNV . 0 21 hm5C_associated_SNPs_47392 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:101395551-101395577
64251 chr11 60689539 60689539 1 + C T UCEC 60689539 + 60689519 60689559 41 CCCGAGCCTCTGGGGCCCAACTCGAGGCCAAGGTGCGAGGG CCCGAGCCTCTGGGGCCCAATTCGAGGCCAAGGTGCGAGGG Direct Loss 0.972660471443829 0 0.92435086 0.9239795 prediction 0.945320942887659 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689539 chr11:60689539 nonsynonymous SNV 0.183 3 21 hm5C_associated_SNPs_47393 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:60689538-60689539
64251 chr2 70122303 70122303 1 + C T UCEC 70122303 + 70122283 70122323 41 CCAGGTCTCGGGAGAGAGATCGGAGAAGGAGCCGCTCGCGA CCAGGTCTCGGGAGAGAGATTGGAGAAGGAGCCGCTCGCGA Direct Loss 0.972538949755274 0 0.9272214 0.9108485 prediction 0.945077899510548 Functional Loss - SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70122303 chr2:70122303 nonsynonymous SNV 0.994 3 21 hm5C_associated_SNPs_47399 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:70122246-70122318
64251 chr19 42828914 42828914 1 + C T UCEC 42828914 + 42828894 42828934 41 GCCCCGAGCGGCGCCGGATTCTGGGCTCCCGCTGTTCCGTG GCCCCGAGCGGCGCCGGATTTTGGGCTCCCGCTGTTCCGTG Direct Loss 0.972489062874034 0 0.8867361 0.8577451 prediction 0.944978125748068 Functional Loss - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42828914 chr19:42828914 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_47403 0 0 1 DDX59 POSTAR2 ENCODE chr19:42828812-42828968
64251 chr19 39423210 39423210 1 + C A MESO 39423210 + 39423190 39423230 41 CGAGGCCGTCTGCTTCATCCCTGGGGAGGGCCACACCCTGC CGAGGCCGTCTGCTTCATCCATGGGGAGGGCCACACCCTGC Direct Loss 0.972446648575381 0 0.32987934 0.50130904 prediction 0.944893297150762 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423210 chr19:39423210 nonsynonymous SNV 0.980 4 21 hm5C_associated_SNPs_47404 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:39423200-39423220
64251 chr1 210012275 210012275 1 + C T LUSC 210012275 + 210012255 210012295 41 TACTGATAGTGGTGCCATTCCGGGAAGCTGCTTTGCGGGTG TACTGATAGTGGTGCCATTCTGGGAAGCTGCTTTGCGGGTG Direct Loss 0.972392447334246 0 0.88177466 0.7659002 prediction 0.944784894668492 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012275 chr1:210012275 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_47407 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:210012260-210012280
64251 chrX 118370488 118370488 1 + C T UCEC 118370488 + 118370468 118370508 41 GGGGACCAGCCGGCGGCCAGCGGCGACAGCGACGACGACGA GGGGACCAGCCGGCGGCCAGTGGCGACAGCGACGACGACGA Direct Loss 0.972387721159858 0 0.42606422 0.1944485 prediction 0.944775442319715 Functional Loss - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118370488 chrX:118370488 synonymous SNV . 0 21 hm5C_associated_SNPs_47408 0 0 8 DKC1 POSTAR2 ENCODE chrX:118370460-118370517
64251 chr22 20760082 20760082 1 + C T UCEC 20760082 + 20760062 20760102 41 GAGTTCGTGTGCGGCGAGTGCGGGAAGGCGTTCCGCCAGAG GAGTTCGTGTGCGGCGAGTGTGGGAAGGCGTTCCGCCAGAG Direct Loss 0.972379830426827 0 0.90034866 0.8881849 prediction 0.944759660853653 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760082 chr22:20760082 synonymous SNV . 0 21 hm5C_associated_SNPs_47409 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr22:20760079-20760100
64251 chr6 80341034 80341034 1 + C T rs531750767 80341034 + 80341014 80341054 41 GCTTTTATCTGCGGACCCGCCGGGAGGGAGCCAGATCCCAG GCTTTTATCTGCGGACCCGCTGGGAGGGAGCCAGATCCCAG Direct Loss 0.972379736635011 0 0.81323224 0.30835766 prediction 0.944759473270022 Functional Loss - SH3BGRL2 ENSG00000198478 UTR5 Human protein_coding chr6:80341034 chr6:80341034 . . 0 21 hm5C_associated_SNPs_47410 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:80341019-80341045
64251 chr7 100779051 100779051 1 + C T PAAD 100779051 + 100779031 100779071 41 AAAGTGAAGATCGAGGTGAACGAGAGTGGCACGGTGGCCTC AAAGTGAAGATCGAGGTGAATGAGAGTGGCACGGTGGCCTC Direct Loss 0.972370570690026 0 0.86948127 0.87608904 prediction 0.944741141380051 Functional Loss - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100779051 chr7:100779051 synonymous SNV . 0 21 hm5C_associated_SNPs_47411 0 0 6 RBM47 POSTAR2 GSE58380,GSM1409656 chr7:100779040-100779060
64251 chr16 30094990 30094990 1 + C T COAD 30094990 + 30094970 30095010 41 CTGTAGATCTTCTGCGTGCACGGGGGCCTCTCCCCCTCCAT CTGTAGATCTTCTGCGTGCATGGGGGCCTCTCCCCCTCCAT Direct Loss 0.9723350042542 0 0.95154905 0.94242173 prediction 0.944670008508401 Functional Loss - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094990 chr16:30094990 synonymous SNV . 0 21 hm5C_associated_SNPs_47414 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:30094975-30095008
64251 chr16 1751952 1751952 1 + C T rs191084488 1751952 + 1751932 1751972 41 ACTCGGGAGGCTGAGTGAGGCAGGAGGATCACTTGAGACCA ACTCGGGAGGCTGAGTGAGGTAGGAGGATCACTTGAGACCA Direct Loss 0.972224961545849 0 0.9189067 0.8983042 prediction 0.944449923091699 Functional Loss - JPT2 ENSG00000206053 UTR3 Human protein_coding chr16:1751952 chr16:1751952 . . 0 21 hm5C_associated_SNPs_47421 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1751850-1751968
64251 chr2 85843346 85843346 1 + C G ESCA 85843346 + 85843326 85843366 41 GCCGGTCTAAGCGGGAGTCTCGCGGTTCCACTCGCGGGAAG GCCGGTCTAAGCGGGAGTCTGGCGGTTCCACTCGCGGGAAG Direct Loss 0.972223223553743 0 0.9042136 0.8620255 prediction 0.944446447107486 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85843346 chr2:85843346 nonsynonymous SNV 0.932 0 21 hm5C_associated_SNPs_47422 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85843313-85843368
64251 chr14 24772341 24772341 1 + C G rs201976440 24772341 + 24772321 24772361 41 TGTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCCCTGG TGTATTGGCCCAGGGCCACCGAGGGGTAGTCATTGCCCTGG Direct Loss 0.972197083770563 0 0.9539491 0.93941903 prediction 0.944394167541126 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24772341 chr14:24772341 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_47425 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24772321-24772348
64251 chr19 35512707 35512707 1 + C T rs138099889 35512707 + 35512687 35512727 41 CCCCTGAGCTGGCGGGCTCACGGGGACGGGCCCCAGCACCC CCCCTGAGCTGGCGGGCTCATGGGGACGGGCCCCAGCACCC Direct Loss 0.972194432370862 0 0.9340384 0.9060728 prediction 0.944388864741724 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512707 chr19:35512707 synonymous SNV . 0 21 hm5C_associated_SNPs_47426 0 0 3 IGF2BP2 POSTAR2 ENCODE chr19:35512694-35512769
64251 chr13 113974779 113974779 1 + C T UCEC 113974779 + 113974759 113974799 41 ACCGTCCTGCTCTTCCAGTTCGGGATGGTGAGGCTGGGGCG ACCGTCCTGCTCTTCCAGTTTGGGATGGTGAGGCTGGGGCG Direct Loss 0.972188346510689 0 0.92905855 0.9190764 prediction 0.944376693021377 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113974779 chr13:113974779 synonymous SNV . 0 21 hm5C_associated_SNPs_47427 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:113974778-113974807
64251 chr19 57050434 57050434 1 + C G rs181108606 57050434 + 57050414 57050454 41 CCGCGAGCCGACGCCGCTCCCGGGTAGAGGCGCCCCCCGCA CCGCGAGCCGACGCCGCTCCGGGGTAGAGGCGCCCCCCGCA Direct Loss 0.972171237465644 0 0.901332 0.9115232 prediction 0.944342474931287 Functional Loss - ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57050434 chr19:57050434 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47428 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57050387-57050438
64251 chr16 2512522 2512522 1 + C T SKCM 2512522 + 2512502 2512542 41 GCGCATGAGGGAGGAGCTCTCGGCAGGTCAGTGGGTCCTGG GCGCATGAGGGAGGAGCTCTTGGCAGGTCAGTGGGTCCTGG Direct Loss 0.972119725099873 0 0.93187034 0.83463097 prediction 0.944239450199746 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2512522 chr16:2512522 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_47431 0 0 1 PPIG POSTAR2 ENCODE chr16:2512451-2512530
64251 chr16 9185931 9185931 1 + C T rs375834133 9185931 + 9185911 9185951 41 CGGAAGGAGGAGGGCGAGGCCGAGATCCAGGAGCACGGGCC CGGAAGGAGGAGGGCGAGGCTGAGATCCAGGAGCACGGGCC Direct Loss 0.972112623520458 0 0.91758424 0.9122964 prediction 0.944225247040915 Functional Loss - C16orf72 ENSG00000182831 CDS Human protein_coding chr16:9185931 chr16:9185931 synonymous SNV . 0 21 hm5C_associated_SNPs_47432 0 0 16 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:9185931-9185932
64251 chr2 136499449 136499449 1 + C T rs373447948 136499449 + 136499429 136499469 41 ACGGAGGGCGGAGCCGGCTTCGGGACTGCGGAGACTACACA ACGGAGGGCGGAGCCGGCTTTGGGACTGCGGAGACTACACA Direct Loss 0.972075232266577 0 0.9169917 0.8894607 prediction 0.944150464533154 Functional Loss - UBXN4 ENSG00000144224 UTR5 Human protein_coding chr2:136499449 chr2:136499449 . . 0 21 hm5C_associated_SNPs_47434 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:136499431-136499456
64251 chr16 2571030 2571030 1 + C T UCEC 2571030 + 2571010 2571050 41 AGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTGGCCC AGCCACGGAGGACGTGGGTTTGGGGGTTGCCCTCGTGGCCC Direct Loss 0.972062928097555 0 0.9386984 0.90318257 prediction 0.944125856195111 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2571030 chr16:2571030 nonsynonymous SNV 0.949 0 21 hm5C_associated_SNPs_47435 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:2571029-2571043
64251 chr22 29694821 29694821 1 + C T UCEC 29694821 + 29694801 29694841 41 CAAGAGGACCCCGGGGTTCCCGAGGGAACCCCTCTGGAGGA CAAGAGGACCCCGGGGTTCCTGAGGGAACCCCTCTGGAGGA Direct Loss 0.972015755560479 0 0.93270147 0.85100424 prediction 0.944031511120959 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29694821 chr22:29694821 stopgain 0.947 0 21 hm5C_associated_SNPs_47440 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:29694760-29694860
64251 chr9 140510167 140510167 1 - G C HNSC 140510167 - 140510147 140510187 41 CCACGCGCCAGCGGGTTTCTCAGCAGGGGAGGTCCACACCA CCACGCGCCAGCGGGTTTCTGAGCAGGGGAGGTCCACACCA Direct Loss 0.971955114623458 0 0.8981758 0.83501995 prediction 0.943910229246917 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510167 chr9:140510167 stopgain . 0 21 hm5C_associated_SNPs_47443 0 0 1 LSM11 POSTAR2 ENCODE chr9:140510098-140510181
64251 chr6 26463515 26463515 1 + C T rs145913124 26463515 + 26463495 26463535 41 TCAATGAGGGGCCATGAAGACGGGGGCATCCGGCTGGAGTG TCAATGAGGGGCCATGAAGATGGGGGCATCCGGCTGGAGTG Direct Loss 0.971915132267697 0 0.9076489 0.85946786 prediction 0.943830264535395 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463515 chr6:26463515 synonymous SNV . 0 21 hm5C_associated_SNPs_47444 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26463513-26463531
64251 chr19 6746083 6746083 1 + C T rs552901206 6746083 + 6746063 6746103 41 CCTGGGGGGCCCCGTACCCTCGGCATTGCCTAACGGACCCC CCTGGGGGGCCCCGTACCCTTGGCATTGCCTAACGGACCCC Direct Loss 0.971909756092228 0 0.5099475 0.25530517 prediction 0.943819512184457 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6746083 chr19:6746083 nonsynonymous SNV 0.209 2 21 hm5C_associated_SNPs_47445 0 0 8 DDX59 POSTAR2 ENCODE chr19:6746040-6746140
64251 chrX 54841892 54841892 1 + C T GBM 54841892 + 54841872 54841912 41 GGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGCTAAAGCCA GGCCAAAGCCCGGATCCAGGTGGGAGCAGAAGCTAAAGCCA Direct Loss 0.971890400681356 0 0.9017875 0.741565 prediction 0.943780801362712 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841892 chrX:54841892 nonsynonymous SNV 0.983 0 21 hm5C_associated_SNPs_47446 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:54841858-54841900
64251 chrX 136649760 136649760 1 + C T COAD 136649760 + 136649740 136649780 41 GCTACTGGGAGGAGTGCCCCCGGGAGGGCAAGTCTTTCAAG GCTACTGGGAGGAGTGCCCCTGGGAGGGCAAGTCTTTCAAG Direct Loss 0.97188377847946 0 0.9052286 0.89199334 prediction 0.94376755695892 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649760 chrX:136649760 nonsynonymous SNV 0.993 5 21 hm5C_associated_SNPs_47447 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:136649760-136649780
64251 chr12 58335497 58335497 1 + C A BLCA 58335497 + 58335477 58335517 41 CGGGAGGCATGGCGGGAGCTCCGGACGAGCGCCGGCGGGGC CGGGAGGCATGGCGGGAGCTACGGACGAGCGCCGGCGGGGC Direct Loss 0.971850936546902 0 0.90468466 0.88166595 prediction 0.943701873093803 Functional Loss - ATP23 ENSG00000166896 CDS Human protein_coding chr12:58335497 chr12:58335497 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_47450 0 0 2 DDX3X POSTAR2 ENCODE chr12:58335411-58335589
64251 chr12 132636059 132636059 1 + C T rs368698447 132636059 + 132636039 132636079 41 GCCTACCTGGTGGCCGCCTTCGCCAAGCGGCTGGCCCGCCT GCCTACCTGGTGGCCGCCTTTGCCAAGCGGCTGGCCCGCCT Direct Loss 0.97179293756036 0 0.943596 0.45715517 prediction 0.94358587512072 Functional Loss - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132636059 chr12:132636059 synonymous SNV . 0 21 hm5C_associated_SNPs_47455 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:132636040-132636084
64251 chr20 62505086 62505086 1 + C G BLCA 62505086 + 62505066 62505106 41 GAGAGGCACTGTGGAGAGCTCAAGAGGAGGCTGGGCCTCTC GAGAGGCACTGTGGAGAGCTGAAGAGGAGGCTGGGCCTCTC Direct Loss 0.97177459466637 0 0.9263997 0.9125458 prediction 0.943549189332739 Functional Loss - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62505086 chr20:62505086 synonymous SNV . 0 21 hm5C_associated_SNPs_47456 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:62505032-62505086
64251 chr3 44906642 44906642 1 + C T SKCM 44906642 + 44906622 44906662 41 CACAGGAAGCTCCCACCCACCTGGAAGCCCCTTCCACACAA CACAGGAAGCTCCCACCCACTTGGAAGCCCCTTCCACACAA Direct Loss 0.971774476864642 0 0.18539363 0.15910807 prediction 0.943548953729284 Functional Loss - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44906642 chr3:44906642 synonymous SNV . 0 21 hm5C_associated_SNPs_47457 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:44906591-44906643
64251 chr11 64889873 64889873 1 + C T KICH 64889873 + 64889853 64889893 41 GATGGAGAACCGGTGTCCAGCGGGGCTGCGGGCTACGGCTG GATGGAGAACCGGTGTCCAGTGGGGCTGCGGGCTACGGCTG Direct Loss 0.971757374910272 0 0.9188273 0.8778467 prediction 0.943514749820545 Functional Loss - MRPL49 ENSG00000149792 CDS Human protein_coding chr11:64889873 chr11:64889873 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47458 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:64889860-64889885
64251 chr6 107349446 107349446 1 + C G rs562503506 107349446 + 107349426 107349466 41 GCCTGCAGTCCGCGCGGCCGCGGGGAGGGACGAGAGGGCCT GCCTGCAGTCCGCGCGGCCGGGGGGAGGGACGAGAGGGCCT Direct Loss 0.97172164227888 0 0.88493574 0.8970336 prediction 0.94344328455776 Functional Loss - C6orf203 ENSG00000130349 UTR5 Human protein_coding chr6:107349446 chr6:107349446 . . 0 21 hm5C_associated_SNPs_47459 0 0 3 DDX3X POSTAR2 ENCODE chr6:107349425-107349486
64251 chr17 73106432 73106432 1 + C T rs74697881 73106432 + 73106412 73106452 41 ACGTCGGGCGGCTGGGATACCTGCAGGCGCTGGTCACGGAA ACGTCGGGCGGCTGGGATACTTGCAGGCGCTGGTCACGGAA Direct Loss 0.971662523429305 0 0.83928806 0.76944387 prediction 0.94332504685861 Functional Loss - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73106432 chr17:73106432 synonymous SNV . 0 21 hm5C_associated_SNPs_47465 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:73106402-73106434
64251 chr19 34919421 34919421 1 + C T BLCA 34919421 + 34919401 34919441 41 GTGGTGGGGGCGGGCGGCATCGGCTGCGAGCTCCTCAAGAA GTGGTGGGGGCGGGCGGCATTGGCTGCGAGCTCCTCAAGAA Direct Loss 0.971629158014334 0 0.8523549 0.6170249 prediction 0.943258316028668 Functional Loss - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34919421 chr19:34919421 synonymous SNV . 0 21 hm5C_associated_SNPs_47469 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:34919280-34919460
64251 chr16 85689974 85689974 1 + C T LUSC 85689974 + 85689954 85689994 41 AGATGGACGAGGAGCTAAGGCGGGAGAGGGAGCGCGAGCGC AGATGGACGAGGAGCTAAGGTGGGAGAGGGAGCGCGAGCGC Direct Loss 0.97160649902597 0 0.8879895 0.69588035 prediction 0.94321299805194 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689974 chr16:85689974 nonsynonymous SNV 0.351 4 21 hm5C_associated_SNPs_47472 0 0 9 BUD13 POSTAR2 ENCODE chr16:85689938-85690016
64251 chr20 52835653 52835653 1 + C T SKCM 52835653 + 52835633 52835673 41 GTTCAGTTGTATGCAAAATTCGGGAGCAACATAAACCTTGA GTTCAGTTGTATGCAAAATTTGGGAGCAACATAAACCTTGA Direct Loss 0.971578962340727 0 0.90103066 0.6283516 prediction 0.943157924681454 Functional Loss - PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52835653 chr20:52835653 synonymous SNV . 0 21 hm5C_associated_SNPs_47474 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr20:52835560-52835685
64251 chr12 6948245 6948245 1 + C T BLCA 6948245 + 6948225 6948265 41 ATGGGGTGTGGGCCGTGACTCGGGGACGGCGCTGTGCCCTG ATGGGGTGTGGGCCGTGACTTGGGGACGGCGCTGTGCCCTG Direct Loss 0.971328236200804 0 0.9446006 0.905161 prediction 0.942656472401607 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6948245 chr12:6948245 nonsynonymous SNV 0.959 2 21 hm5C_associated_SNPs_47483 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6948241-6948286
64251 chr14 24607728 24607728 1 + C A LUSC 24607728 + 24607708 24607748 41 AGCTGGATGAGGCAGAGTACCGGGACATCCGGCTGATGGTC AGCTGGATGAGGCAGAGTACAGGGACATCCGGCTGATGGTC Direct Loss 0.971302025514078 0 0.9030776 0.8239191 prediction 0.942604051028157 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607728 chr14:24607728 synonymous SNV . 0 21 hm5C_associated_SNPs_47484 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:24607701-24607742
64251 chr11 134123521 134123521 1 + C T LUSC 134123521 + 134123501 134123541 41 TGGAGCGGCTGCCGGCGTTTCGGGGCGCGCCTCGGCTGCCT TGGAGCGGCTGCCGGCGTTTTGGGGCGCGCCTCGGCTGCCT Direct Loss 0.971289456933385 0 0.95048 0.92785466 prediction 0.942578913866771 Functional Loss - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134123521 chr11:134123521 synonymous SNV . 0 21 hm5C_associated_SNPs_47485 0 0 2 DDX3X POSTAR2 ENCODE chr11:134123470-134123578
64251 chr21 46387037 46387037 1 + C T BLCA 46387037 + 46387017 46387057 41 GTGGGGGACCTGCACCCTCTCAGGGATGCCCTGCCCGAGCT GTGGGGGACCTGCACCCTCTTAGGGATGCCCTGCCCGAGCT Direct Loss 0.97127178865199 0 0.94482815 0.9185896 prediction 0.942543577303979 Functional Loss - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46387037 chr21:46387037 synonymous SNV . 0 21 hm5C_associated_SNPs_47487 0 0 10 AKAP8L POSTAR2 ENCODE chr21:46387019-46387074
64251 chr12 51203301 51203301 1 + C A GBM 51203301 + 51203281 51203321 41 AAAAGGAGACGGAGAAAATTCTGGAGTTTCTGCTGCTGTCA AAAAGGAGACGGAGAAAATTATGGAGTTTCTGCTGCTGTCA Direct Loss 0.971101882430352 0 0.8634237 0.7615187 prediction 0.942203764860704 Functional Loss - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51203301 chr12:51203301 nonsynonymous SNV 0.956 1 21 hm5C_associated_SNPs_47496 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:51203294-51203318
64251 chr19 50154733 50154733 1 + C T BLCA 50154733 + 50154713 50154753 41 GGACCGAGGCAGAGGCTTGTCGGGAAGGCAAGGTCTCGGTG GGACCGAGGCAGAGGCTTGTTGGGAAGGCAAGGTCTCGGTG Direct Loss 0.971076541306575 0 0.8974346 0.8651439 prediction 0.94215308261315 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154733 chr19:50154733 nonsynonymous SNV 0.865 2 21 hm5C_associated_SNPs_47499 0 0 1 RBM15 POSTAR2 ENCODE chr19:50154727-50154792
64251 chr9 140137946 140137946 1 + C G LUSC 140137946 + 140137926 140137966 41 TGTCCGAGTACCAGCAGTACCAGGATGCCACAGCCGAGGAG TGTCCGAGTACCAGCAGTACGAGGATGCCACAGCCGAGGAG Direct Loss 0.971069492625947 0 0.86866814 0.75217205 prediction 0.942138985251894 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137946 chr9:140137946 nonsynonymous SNV 0.996 3 21 hm5C_associated_SNPs_47500 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:140137943-140138049
64251 chr2 241569742 241569742 1 + C A rs34778053 241569742 + 241569722 241569762 41 TGCGGCACCCGCTGCGTGCCCGCGGGCTGCGGTCCCCCAGG TGCGGCACCCGCTGCGTGCCAGCGGGCTGCGGTCCCCCAGG Direct Loss 0.971028339003305 0 0.8973658 0.87083817 prediction 0.942056678006609 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569742 chr2:241569742 nonsynonymous SNV 0.004 4 21 hm5C_associated_SNPs_47502 0 0 2 DDX3X POSTAR2 ENCODE chr2:241569712-241569762
64251 chr1 229771163 229771163 1 + C T STAD 229771163 + 229771143 229771183 41 GCAGCAAGGGGATGTGAAGACGGGAGCCATGAAGAACCTTC GCAGCAAGGGGATGTGAAGATGGGAGCCATGAAGAACCTTC Direct Loss 0.970989880852527 0 0.32632652 0.2999359 prediction 0.941979761705055 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771163 chr1:229771163 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47506 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:229771160-229771180
64251 chr1 173454569 173454569 1 + C T BLCA 173454569 + 173454549 173454589 41 CCATCATCGATGATAGGAATCGGGAGCTTGCCATCCTGTTG CCATCATCGATGATAGGAATTGGGAGCTTGCCATCCTGTTG Direct Loss 0.970977565666125 0 0.9118811 0.65548563 prediction 0.941955131332251 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454569 chr1:173454569 nonsynonymous SNV 0.398 3 21 hm5C_associated_SNPs_47507 0 0 25 TARDBP POSTAR2 DRA001158,DRS012386 chr1:173454553-173454586
64251 chr17 76134132 76134132 1 + C T LGG 76134132 + 76134112 76134152 41 GGTTCTGGGCCTGGCTGGAACGGGAGGAGTTCCTGGTCCCC GGTTCTGGGCCTGGCTGGAATGGGAGGAGTTCCTGGTCCCC Direct Loss 0.970971550756946 0 0.93560326 0.922577 prediction 0.941943101513892 Functional Loss - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76134132 chr17:76134132 nonsynonymous SNV 0.993 3 21 hm5C_associated_SNPs_47508 0 0 1 FASTKD2 POSTAR2 ENCODE chr17:76134085-76134132
64251 chr15 95399667 95399667 1 + C A rs567683681 95399667 + 95399647 95399687 41 GGGCCGGAGGCTGGGGATGCCGAGGTCTGTCCCACGCCCAC GGGCCGGAGGCTGGGGATGCAGAGGTCTGTCCCACGCCCAC Direct Loss 0.970909169371746 0 0.9320911 0.9295489 prediction 0.941818338743491 Functional Loss - LOC440311 ENSG00000260521 ncRNA_exonic Human processed_pseudogene chr15:95399667 chr15:95399667 . . 0 21 hm5C_associated_SNPs_47510 0 0 1 UCHL5 POSTAR2 ENCODE chr15:95399580-95399677
64251 chr14 20924986 20924986 1 + C T HNSC 20924986 + 20924966 20925006 41 GTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTT GTGGCGTGGGCCTGCTTTCCTGCCAGTGCCCACTCAAAGTT Direct Loss 0.970886058098691 0 0.16893655 0.16697937 prediction 0.941772116197382 Functional Loss - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20924986 chr14:20924986 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47511 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:20924961-20924987
64251 chr18 47919628 47919628 1 + C T rs189155432 47919628 + 47919608 47919648 41 AGGTGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTC AGGTGGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTC Direct Loss 0.97087528318506 0 0.86861885 0.7602781 prediction 0.941750566370119 Functional Loss - SKA1 ENSG00000154839 UTR3 Human protein_coding chr18:47919628 chr18:47919628 . . 0 21 hm5C_associated_SNPs_47512 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr18:47919620-47919640
64251 chr14 50088216 50088216 1 + C T LUSC 50088216 + 50088196 50088236 41 GTCGGCGGCTTCCCTGGTCCCGGCGGTCCCCCAGCCCGAGG GTCGGCGGCTTCCCTGGTCCTGGCGGTCCCCCAGCCCGAGG Direct Loss 0.97085660561325 0 0.87931687 0.38514733 prediction 0.9417132112265 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088216 chr14:50088216 nonsynonymous SNV 0.010 1 21 hm5C_associated_SNPs_47513 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:50088155-50088239
64251 chr11 32610244 32610244 1 + C T SKCM 32610244 + 32610224 32610264 41 GTGAAAAGCTGGTCAAATTTCGCGAAGGTGAACGCCCGTCT GTGAAAAGCTGGTCAAATTTTGCGAAGGTGAACGCCCGTCT Direct Loss 0.970762339235932 0 0.56807196 0.32973987 prediction 0.941524678471864 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32610244 chr11:32610244 nonsynonymous SNV 0.986 2 21 hm5C_associated_SNPs_47518 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:32610231-32610253
64251 chr1 206808901 206808901 1 + C T rs201102051 206808901 + 206808881 206808921 41 ACTTCCCAGCCGGGGCCAGTCGGGAGCGAAAGTGCGCTGAG ACTTCCCAGCCGGGGCCAGTTGGGAGCGAAAGTGCGCTGAG Direct Loss 0.970677012880231 0 0.91759753 0.89194137 prediction 0.941354025760462 Functional Loss - DYRK3 ENSG00000237605 ncRNA_intronic Human antisense chr1:206808901 chr1:206808901 . . 0 21 hm5C_associated_SNPs_47522 0 0 2 DDX3X POSTAR2 ENCODE chr1:206808881-206809045
64251 chr7 150068940 150068940 1 + C A PAAD 150068940 + 150068920 150068960 41 GGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAG GGGTGCACGTAGCTGAGGCCATGGAGGAGGCCGCAGCCAAG Direct Loss 0.970667504368087 0 0.8974895 0.8870261 prediction 0.941335008736175 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068940 chr7:150068940 nonsynonymous SNV 0.991 2 21 hm5C_associated_SNPs_47524 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150068907-150068941
64251 chr3 41275738 41275738 1 + C T SKCM 41275738 + 41275718 41275758 41 AGTTGCTTGTTCGTGCACATCAGGATACCCAGCGCCGTACG AGTTGCTTGTTCGTGCACATTAGGATACCCAGCGCCGTACG Direct Loss 0.970646181438238 0 0.8894489 0.8767148 prediction 0.941292362876477 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275738 chr3:41275738 stopgain 0.586 1 21 hm5C_associated_SNPs_47525 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:41275695-41275746
64251 chr16 68328627 68328627 1 + C T CESC 68328627 + 68328607 68328647 41 GGTTGTTCTTCGTGGGCTCCCGGGAGGGCCACCTACCGGAC GGTTGTTCTTCGTGGGCTCCTGGGAGGGCCACCTACCGGAC Direct Loss 0.970631125091982 0 0.9503205 0.94676685 prediction 0.941262250183964 Functional Loss - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68328627 chr16:68328627 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_47528 0 0 1 U2AF2 POSTAR2 ENCODE chr16:68328610-68328652
64251 chr2 62449557 62449557 1 + C T PAAD 62449557 + 62449537 62449577 41 GAGAGCAAGAGAAGCTGAACCGGCAGTACAACCCCATCCTG GAGAGCAAGAGAAGCTGAACTGGCAGTACAACCCCATCCTG Direct Loss 0.970578099603634 0 0.9066824 0.5171711 prediction 0.941156199207269 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449557 chr2:62449557 nonsynonymous SNV 0.970 0 21 hm5C_associated_SNPs_47531 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:62449540-62449560
64251 chr19 45563845 45563845 1 + C T UCEC 45563845 + 45563825 45563865 41 GACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGT GACGCCAGCGGAGAGAGTTTTGGGAGAAGCGGCTGAGGGGT Direct Loss 0.970521338241946 0 0.9603206 0.9411598 prediction 0.941042676483892 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45563845 chr19:45563845 nonsynonymous SNV 0.993 3 21 hm5C_associated_SNPs_47533 0 0 11 EFTUD2 POSTAR2 ENCODE chr19:45563751-45563849
64251 chr16 50583388 50583388 1 + C T KIRC 50583388 + 50583368 50583408 41 AAGGGCATCGAGGAGTGGATCGGGAGACAGCGCTGCCCGGG AAGGGCATCGAGGAGTGGATTGGGAGACAGCGCTGCCCGGG Direct Loss 0.970513800130353 0 0.9401869 0.9124746 prediction 0.941027600260707 Functional Loss - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50583388 chr16:50583388 synonymous SNV . 0 21 hm5C_associated_SNPs_47534 0 0 4 GRWD1 POSTAR2 ENCODE chr16:50583383-50583469
64251 chr1 112298676 112298676 1 + C G LUAD 112298676 + 112298656 112298696 41 TGAGGATCCTGCGGACCGCTCAGGATCTCAGCAGCCCGCGG TGAGGATCCTGCGGACCGCTGAGGATCTCAGCAGCCCGCGG Direct Loss 0.970498576891335 0 0.9109211 0.8589611 prediction 0.94099715378267 Functional Loss - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112298676 chr1:112298676 nonsynonymous SNV 0.318 1 21 hm5C_associated_SNPs_47535 0 0 1 FMR1 POSTAR2 ENCODE chr1:112298634-112298840
64251 chrX 153674213 153674213 1 + C T UCEC 153674213 + 153674193 153674233 41 AGGAGGCTCTGGTGAAGGAGCGGGAGAAGCAGCTGGCCAAG AGGAGGCTCTGGTGAAGGAGTGGGAGAAGCAGCTGGCCAAG Direct Loss 0.97049016622576 0 0.9069275 0.7962465 prediction 0.94098033245152 Functional Loss - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153674213 chrX:153674213 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47536 0 0 3 BUD13 POSTAR2 ENCODE chrX:153674182-153674215
64251 chr4 25314443 25314443 1 + C T SKCM 25314443 + 25314423 25314463 41 GGCGGGAAGATGGCGGCCTCCAGGAATGGGTTTGAAGCCGT GGCGGGAAGATGGCGGCCTCTAGGAATGGGTTTGAAGCCGT Direct Loss 0.970488487908232 0 0.81437135 0.49720588 prediction 0.940976975816463 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25314443 chr4:25314443 synonymous SNV . 0 21 hm5C_associated_SNPs_47537 0 0 1 NCBP2 POSTAR2 ENCODE chr4:25314429-25314495
64251 chr14 50360229 50360229 1 + C G rs112017635 50360229 + 50360209 50360249 41 GGCGGCTCCCAGCGCAGTCTCAGGGCCCGGGTGGCGGCGGC GGCGGCTCCCAGCGCAGTCTGAGGGCCCGGGTGGCGGCGGC Direct Loss 0.970467674484129 0 0.9362254 0.877404 prediction 0.940935348968257 Functional Loss - ARF6 ENSG00000165527 UTR5 Human protein_coding chr14:50360229 chr14:50360229 . . 0 21 hm5C_associated_SNPs_47539 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:50360220-50360240
64251 chr9 77703431 77703431 1 + C T rs73544571 77703431 + 77703411 77703451 41 CCGCGGGGCGGGGCGGAGCACTCGGCGGAGCCGCTCTGCCT CCGCGGGGCGGGGCGGAGCATTCGGCGGAGCCGCTCTGCCT Direct Loss 0.970462264717287 0 0.8272756 0.8760536 prediction 0.940924529434575 Functional Loss - OSTF1 ENSG00000106733;ENSG00000134996 upstream Human other chr9:77703431 chr9:77703431 . . 0 21 hm5C_associated_SNPs_47540 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:77703431-77703432
64251 chr8 11142166 11142166 1 + C A rs562455672 11142166 + 11142146 11142186 41 GCCTGGTGAACCGCGCGGTGCGGGAGAGGCGCTTGGGCCTC GCCTGGTGAACCGCGCGGTGAGGGAGAGGCGCTTGGGCCTC Direct Loss 0.970389113416442 0 0.89088714 0.8556591 prediction 0.940778226832885 Functional Loss - MTMR9 ENSG00000104643 UTR5 Human protein_coding chr8:11142166 chr8:11142166 . . 0 21 hm5C_associated_SNPs_47546 0 0 1 DDX3X POSTAR2 ENCODE chr8:11142129-11142176
64251 chr16 31139397 31139397 1 + C T LUSC 31139397 + 31139377 31139417 41 TGCCAGTGGCGGCAGCCCCCCGGGAAAGAGATCTACCGCAA TGCCAGTGGCGGCAGCCCCCTGGGAAAGAGATCTACCGCAA Direct Loss 0.970309295314741 0 0.8535193 0.44561803 prediction 0.940618590629482 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31139397 chr16:31139397 synonymous SNV . 0 21 hm5C_associated_SNPs_47553 0 0 2 DDX24 POSTAR2 ENCODE chr16:31139369-31139425
64251 chr3 142840292 142840292 1 + C T rs72551382 142840292 + 142840272 142840312 41 ATCCGGGGGACGCCGTTTCCCTGCAGGGGGCAGCGCGGGAC ATCCGGGGGACGCCGTTTCCTTGCAGGGGGCAGCGCGGGAC Direct Loss 0.970298817606731 0 0.38381076 0.61844015 prediction 0.940597635213463 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840292 chr3:142840292 synonymous SNV . 0 21 hm5C_associated_SNPs_47556 0 0 1 FMR1 POSTAR2 ENCODE chr3:142840272-142840317
64251 chr9 132565593 132565593 1 + C T CESC 132565593 + 132565573 132565613 41 ATCACCGTGGGCCTAGCCATCGGGGCCGCGTCGGCCATCAC ATCACCGTGGGCCTAGCCATTGGGGCCGCGTCGGCCATCAC Direct Loss 0.970293021095289 0 0.94967747 0.9225637 prediction 0.940586042190579 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132565593 chr9:132565593 synonymous SNV . 0 21 hm5C_associated_SNPs_47557 0 0 4 DDX3X POSTAR2 ENCODE chr9:132565576-132565617
64251 chr6 28227179 28227179 1 + C A BRCA 28227179 + 28227159 28227199 41 GTATCCCGGTCCAGCTATTCCGAGGACATCGTGGGCTCTCG GTATCCCGGTCCAGCTATTCAGAGGACATCGTGGGCTCTCG Direct Loss 0.970263137755309 0 0.91122437 0.92420006 prediction 0.940526275510619 Functional Loss - NKAPL ENSG00000189134 CDS Human protein_coding chr6:28227179 chr6:28227179 synonymous SNV . 0 21 hm5C_associated_SNPs_47558 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:28227156-28227184
64251 chr7 134613548 134613548 1 + C T UCEC 134613548 + 134613528 134613568 41 ATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCC ATGATGAAGAGGAGGCAGCCTGGGAACGGCGCCGCCGAGCC Direct Loss 0.970262252724573 0 0.8617248 0.67095274 prediction 0.940524505449146 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134613548 chr7:134613548 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_47559 0 0 5 GRWD1 POSTAR2 ENCODE chr7:134613517-134613585
64251 chr9 101602409 101602409 1 + C T UCEC 101602409 + 101602389 101602429 41 GAGGACAGGCCTGGCTTCTTCGGGATGGTGAGTGAGGGTGG GAGGACAGGCCTGGCTTCTTTGGGATGGTGAGTGAGGGTGG Direct Loss 0.970231121570914 0 0.8700966 0.7961984 prediction 0.940462243141829 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101602409 chr9:101602409 synonymous SNV . 0 21 hm5C_associated_SNPs_47560 0 0 3 SRSF1 POSTAR2 ENCODE chr9:101602363-101602414
64251 chr3 10219626 10219626 1 + C T UCEC 10219626 + 10219606 10219646 41 TGCTGTGGTGGTGGGGCATGCGGCAGGCCACCGTCCAGCAA TGCTGTGGTGGTGGGGCATGTGGCAGGCCACCGTCCAGCAA Direct Loss 0.970220388246081 0 0.8998384 0.86090434 prediction 0.940440776492162 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10219626 chr3:10219626 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_47561 0 0 1 BUD13 POSTAR2 ENCODE chr3:10219592-10219657
64251 chr12 118577301 118577301 1 + C A HNSC 118577301 + 118577281 118577321 41 AACATGAAGGGCAATGACATCAGCAGTGGCACAGTCCTCTC AACATGAAGGGCAATGACATAAGCAGTGGCACAGTCCTCTC Direct Loss 0.970170445050231 0 0.43033987 0.27360988 prediction 0.940340890100463 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118577301 chr12:118577301 synonymous SNV . 0 21 hm5C_associated_SNPs_47565 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:118577284-118577315
64251 chr1 153633723 153633723 1 + C T UCEC 153633723 + 153633703 153633743 41 GTTGCCAAGGAAACAGCCCGCAGGAGAGCAATGCTGGATTC GTTGCCAAGGAAACAGCCCGTAGGAGAGCAATGCTGGATTC Direct Loss 0.970096598347583 0 0.8784754 0.5844928 prediction 0.940193196695166 Functional Loss - SNAPIN ENSG00000143553 CDS Human protein_coding chr1:153633723 chr1:153633723 synonymous SNV . 0 21 hm5C_associated_SNPs_47567 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr1:153633684-153633731
64251 chr15 75185571 75185571 1 + C T BLCA 75185571 + 75185551 75185591 41 CCCAGGCTGTGGCCTCCTCTCTGCAGAGCTGTTTCTCCCAC CCCAGGCTGTGGCCTCCTCTTTGCAGAGCTGTTTCTCCCAC Direct Loss 0.970079068449433 0 0.22425348 0.13891032 prediction 0.940158136898867 Functional Loss - MPI ENSG00000178802 CDS Human protein_coding chr15:75185571 chr15:75185571 synonymous SNV . 0 21 hm5C_associated_SNPs_47568 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:75185545-75185574
64251 chr7 100803860 100803860 1 + C T rs372487377 100803860 + 100803840 100803880 41 TGGCATAGCCCCTGCTGGGCCGGGGTGTGGCGATGGGGTCC TGGCATAGCCCCTGCTGGGCTGGGGTGTGGCGATGGGGTCC Direct Loss 0.969964245063261 0 0.85479903 0.6947076 prediction 0.939928490126521 Functional Loss - AP1S1 ENSG00000106367 UTR3 Human protein_coding chr7:100803860 chr7:100803860 . . 0 21 hm5C_associated_SNPs_47580 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:100803837-100803871
64251 chr4 56290754 56290754 1 + C T COAD 56290754 + 56290734 56290774 41 TGTGGGGCACTGCCTGTGCACGGGATTGGCAGTAATTGGAG TGTGGGGCACTGCCTGTGCATGGGATTGGCAGTAATTGGAG Direct Loss 0.969955928317845 0 0.8452783 0.5739561 prediction 0.93991185663569 Functional Loss - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56290754 chr4:56290754 nonsynonymous SNV 0.386 5 21 hm5C_associated_SNPs_47581 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:56290730-56290766
64251 chr13 114290941 114290941 1 + C T UCEC 114290941 + 114290921 114290961 41 CATGGCTTGCGGGCTGGAGTCGGGGAGCTGCTCTGCCGAAG CATGGCTTGCGGGCTGGAGTTGGGGAGCTGCTCTGCCGAAG Direct Loss 0.96993916384082 0 0.93483436 0.8948966 prediction 0.93987832768164 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290941 chr13:114290941 nonsynonymous SNV 0.222 3 21 hm5C_associated_SNPs_47584 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:114290910-114290964
64251 chr14 52471323 52471323 1 + C T rs192664435 52471323 + 52471303 52471343 41 AAATCAAAATGTCACATTCTCGGGGGAGGAAGCCCAGAAAA AAATCAAAATGTCACATTCTTGGGGGAGGAAGCCCAGAAAA Direct Loss 0.969931537858564 0 0.9556433 0.92210436 prediction 0.939863075717129 Functional Loss - C14orf166 ENSG00000087302 UTR3 Human protein_coding chr14:52471323 chr14:52471323 . . 0 21 hm5C_associated_SNPs_47585 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:52471091-52471376
64251 chr1 32671349 32671349 1 + C A UCEC 32671349 + 32671329 32671369 41 GGGGGCGGGCGCGGGGTTCACAGGATTTTTCCTTTAGGGAA GGGGGCGGGCGCGGGGTTCAAAGGATTTTTCCTTTAGGGAA Direct Loss 0.969916633569873 0 0.9107542 0.8883444 prediction 0.939833267139747 Functional Loss - IQCC ENSG00000160051 CDS Human protein_coding chr1:32671349 chr1:32671349 nonsynonymous SNV 0.006 1 21 hm5C_associated_SNPs_47587 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:32671340-32671360
64251 chrX 129546493 129546493 1 + C T LUAD 129546493 + 129546473 129546513 41 GCAAGAACTCAGAGAGAGCTCAGAAGTCAGAGCCCAGGGAG GCAAGAACTCAGAGAGAGCTTAGAAGTCAGAGCCCAGGGAG Direct Loss 0.969883862734091 0 0.2980836 0.14889905 prediction 0.939767725468181 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546493 chrX:129546493 stopgain 0.079 0 21 hm5C_associated_SNPs_47588 0 0 3 TRA2A POSTAR2 ENCODE chrX:129546400-129546529
64251 chr6 3017194 3017194 1 + C T UCEC 3017194 + 3017174 3017214 41 GACAGGAGTCAATGGAGATTCTCGATACTTCCTGTGGCCAC GACAGGAGTCAATGGAGATTTTCGATACTTCCTGTGGCCAC Direct Loss 0.969855149497673 0 0.91008085 0.73015314 prediction 0.939710298995346 Functional Loss - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3017194 chr6:3017194 nonsynonymous SNV 0.374 0 21 hm5C_associated_SNPs_47590 0 0 3 SRSF1 POSTAR2 ENCODE chr6:3017119-3017213
64251 chr5 148725156 148725156 1 + C A UCEC 148725156 + 148725136 148725176 41 CGGGTGCAGCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAG CGGGTGCAGCGCCTACTGGCATGGAGTGCCGCGTGGGAGAG Direct Loss 0.969823562748665 0 0.2529443 0.41233587 prediction 0.93964712549733 Functional Loss - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148725156 chr5:148725156 synonymous SNV . 0 21 hm5C_associated_SNPs_47592 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:148725098-148725178
64251 chr1 227935805 227935805 1 + C T UCEC 227935805 + 227935785 227935825 41 GACCCGGGGCGAGGAGCTGACGGGACTCATGGCTGGATCCC GACCCGGGGCGAGGAGCTGATGGGACTCATGGCTGGATCCC Direct Loss 0.969795198155313 0 0.8428881 0.7825377 prediction 0.939590396310625 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227935805 chr1:227935805 nonsynonymous SNV 0.013 0 21 hm5C_associated_SNPs_47595 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:227935798-227935828
64251 chr6 27783160 27783160 1 + C G LUSC 27783160 + 27783140 27783180 41 TTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCCGTCAC TTGGCCAAGCACGCCGTGTCGGAGGGCACCAAGGCCGTCAC Direct Loss 0.969724722605132 0 0.9068239 0.9048624 prediction 0.939449445210264 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783160 chr6:27783160 synonymous SNV . 0 21 hm5C_associated_SNPs_47598 0 0 4 EIF3D POSTAR2 ENCODE chr6:27783103-27783168
64251 chr5 74065137 74065137 1 + C T BLCA 74065137 + 74065117 74065157 41 GCTGGACAGAGAGGGACAATCTCGAGCTAAAGTACTTTCCA GCTGGACAGAGAGGGACAATTTCGAGCTAAAGTACTTTCCA Direct Loss 0.969676902495501 0 0.7351163 0.6770568 prediction 0.939353804991003 Functional Loss - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74065137 chr5:74065137 nonsynonymous SNV 0.851 1 21 hm5C_associated_SNPs_47601 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:74065135-74065156
64251 chr19 808629 808629 1 + C T STAD 808629 + 808609 808649 41 ACCAGAACGTGCAGCTGCCCCGCGAGGGCCAGGAGGACCAG ACCAGAACGTGCAGCTGCCCTGCGAGGGCCAGGAGGACCAG Direct Loss 0.969594591383018 0 0.50358313 0.5613991 prediction 0.939189182766036 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808629 chr19:808629 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_47608 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:808612-808648
64251 chr16 723543 723543 1 + C T BLCA 723543 + 723523 723563 41 CGGGGGCTGCTGGGGGTTGTCGGGGCCGCCGTGGCCGCAGT CGGGGGCTGCTGGGGGTTGTTGGGGCCGCCGTGGCCGCAGT Direct Loss 0.969531157430176 0 0.9539249 0.9307267 prediction 0.939062314860351 Functional Loss - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:723543 chr16:723543 synonymous SNV . 0 21 hm5C_associated_SNPs_47614 0 0 3 DDX24 POSTAR2 ENCODE chr16:723504-723557
64251 chr11 67258381 67258381 1 + C T UCEC 67258381 + 67258361 67258401 41 CCCTGGCGCCTGTGGTGAGCCGAGAGCTGCAGGCCCTGGAG CCCTGGCGCCTGTGGTGAGCTGAGAGCTGCAGGCCCTGGAG Direct Loss 0.969467827965014 0 0.85270226 0.71693015 prediction 0.938935655930028 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67258381 chr11:67258381 stopgain 0.972 0 21 hm5C_associated_SNPs_47618 1 0 2 DROSHA POSTAR2 ENCODE chr11:67258348-67258397
64251 chr15 91489871 91489871 1 + C T rs200344405 91489871 + 91489851 91489891 41 TTTGAGGGCCAAGGGCTGGCCGGGAAGCTACGGGCCATCCA TTTGAGGGCCAAGGGCTGGCTGGGAAGCTACGGGCCATCCA Direct Loss 0.969434281347957 0 0.93053067 0.9101106 prediction 0.938868562695914 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91489871 chr15:91489871 synonymous SNV . 0 21 hm5C_associated_SNPs_47621 0 0 11 BUD13 POSTAR2 ENCODE chr15:91489846-91489902
64251 chr12 3121375 3121375 1 + C T SKCM 3121375 + 3121355 3121395 41 TGCTGGCTCGTCGCAAAGCTCGCGAGATCCAGGCCAAGCTA TGCTGGCTCGTCGCAAAGCTTGCGAGATCCAGGCCAAGCTA Direct Loss 0.969426650975704 0 0.90746886 0.29467782 prediction 0.938853301951407 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3121375 chr12:3121375 nonsynonymous SNV 0.994 4 21 hm5C_associated_SNPs_47622 0 0 1 PRPF8 POSTAR2 ENCODE chr12:3121358-3121427
64251 chr20 57597926 57597926 1 + C T rs35505670 57597926 + 57597906 57597946 41 GAGATGATTGGTGAGGAACACGGGATCGACTTGGCTGGGAG GAGATGATTGGTGAGGAACATGGGATCGACTTGGCTGGGAG Direct Loss 0.969403587625194 0 0.90122294 0.8828658 prediction 0.938807175250387 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57597926 chr20:57597926 synonymous SNV . 0 21 hm5C_associated_SNPs_47624 0 0 4 BUD13 POSTAR2 ENCODE chr20:57597897-57598034
64251 chr14 31344034 31344034 1 + C G rs530652156 31344034 + 31344014 31344054 41 TCTCTCCTCTGCGCCGCGCCCGGGGATCCGAAGGGTGCGGG TCTCTCCTCTGCGCCGCGCCGGGGGATCCGAAGGGTGCGGG Direct Loss 0.969379599742343 0 0.9305508 0.9124212 prediction 0.938759199484686 Functional Loss - COCH ENSG00000100473 UTR5 Human protein_coding chr14:31344034 chr14:31344034 . . 0 21 hm5C_associated_SNPs_47630 0 0 10 EIF3B POSTAR2 GSE65004,GSM1585667 chr14:31344010-31344035
64251 chr15 65869710 65869710 1 + C T rs181723777 65869710 + 65869690 65869730 41 AGGTCAAGGCTGCAGTGAGCCGAGATTGTGCCACTGCACTG AGGTCAAGGCTGCAGTGAGCTGAGATTGTGCCACTGCACTG Direct Loss 0.969234398141332 0 0.73865914 0.4297419 prediction 0.938468796282663 Functional Loss - HACD3 ENSG00000074696 UTR3 Human protein_coding chr15:65869710 chr15:65869710 . . 0 21 hm5C_associated_SNPs_47640 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:65869700-65869720
64251 chr7 72413471 72413471 1 + C T SKCM 72413471 + 72413451 72413491 41 GGCCGCTGAGGGGCAGCCACCGGGGGCCGCCAAGCCGGCCC GGCCGCTGAGGGGCAGCCACTGGGGGCCGCCAAGCCGGCCC Direct Loss 0.969217396326739 0 0.9526052 0.9415935 prediction 0.938434792653478 Functional Loss - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413471 chr7:72413471 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_47642 0 0 2 RBM15 POSTAR2 ENCODE chr7:72413445-72413482
64251 chr1 114524038 114524038 1 + C T UCEC 114524038 + 114524018 114524058 41 TTTGGGCTGTCTATGCCACCCGGGAGGATGACAGGCACTTG TTTGGGCTGTCTATGCCACCTGGGAGGATGACAGGCACTTG Direct Loss 0.969198094863337 0 0.8809551 0.5078565 prediction 0.938396189726675 Functional Loss - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524038 chr1:114524038 nonsynonymous SNV 0.125 3 21 hm5C_associated_SNPs_47644 0 0 1 SND1 POSTAR2 ENCODE chr1:114524009-114524069
64251 chr21 35772119 35772119 1 + C T COAD 35772119 + 35772099 35772139 41 GACAAGGAAGGAAGGACAATCGGGAGGAGGGAGTCTTGCTT GACAAGGAAGGAAGGACAATTGGGAGGAGGGAGTCTTGCTT Direct Loss 0.96911699770601 0 0.94314826 0.9297584 prediction 0.938233995412019 Functional Loss - C21orf140 ENSG00000205670 CDS Human protein_coding chr21:35772119 chr21:35772119 synonymous SNV . 0 21 hm5C_associated_SNPs_47652 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:35772116-35772147
64251 chr2 88991297 88991297 1 + C T CESC 88991297 + 88991277 88991317 41 AGGGCCGGGGGCGCGGCCTCCGGCGGAGGAGGGAACAGCTG AGGGCCGGGGGCGCGGCCTCTGGCGGAGGAGGGAACAGCTG Direct Loss 0.969101038582456 0 0.9164014 0.8990592 prediction 0.938202077164913 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:88991297 chr2:88991297 synonymous SNV . 0 21 hm5C_associated_SNPs_47653 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:88991256-88991310
64251 chr7 5266847 5266847 1 + C T COAD 5266847 + 5266827 5266867 41 ACCACCTGGACCGGGTACTTCGGGAAAGTGCTCATGGCCTC ACCACCTGGACCGGGTACTTTGGGAAAGTGCTCATGGCCTC Direct Loss 0.96894671665645 0 0.92705464 0.72326463 prediction 0.937893433312901 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5266847 chr7:5266847 synonymous SNV . 0 21 hm5C_associated_SNPs_47660 0 0 3 SF3B4 POSTAR2 ENCODE chr7:5266755-5266854
64251 chr18 77806613 77806613 1 + C T rs148151854 77806613 + 77806593 77806633 41 GCTGGGCTGGCACGTGGCGCCGGGGGCTCCATCCCTGGGGC GCTGGGCTGGCACGTGGCGCTGGGGGCTCCATCCCTGGGGC Direct Loss 0.968943051240314 0 0.93360656 0.91795874 prediction 0.937886102480629 Functional Loss - RBFA ENSG00000267127 intronic Human protein_coding chr18:77806613 chr18:77806613 . . 0 21 hm5C_associated_SNPs_47661 0 0 1 NKRF POSTAR2 ENCODE chr18:77806570-77806666
64251 chrX 49106657 49106657 1 + C T UCEC 49106657 + 49106637 49106677 41 TCAGCAACCTGGAGAAGATCCGGGAGGACTACCGAGCCCTC TCAGCAACCTGGAGAAGATCTGGGAGGACTACCGAGCCCTC Direct Loss 0.968900537555901 0 0.91725284 0.91072583 prediction 0.937801075111802 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49106657 chrX:49106657 nonsynonymous SNV 0.975 1 21 hm5C_associated_SNPs_47663 0 0 3 DDX6 POSTAR2 ENCODE chrX:49106655-49106798
64251 chr2 220110309 220110309 1 + C T rs375414817 220110309 + 220110289 220110329 41 TAGACCGGGGTGGGCCCTGCCAGGAGTGGGCCTGAGCCTCG TAGACCGGGGTGGGCCCTGCTAGGAGTGGGCCTGAGCCTCG Direct Loss 0.968900447345101 0 0.9128994 0.8466725 prediction 0.937800894690201 Functional Loss - STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110309 chr2:220110309 . . 0 21 hm5C_associated_SNPs_47664 0 0 3 DDX3X POSTAR2 ENCODE chr2:220110269-220110322
64251 chr6 17421817 17421817 1 + C G LGG 17421817 + 17421797 17421837 41 TGCAGGGACTGGTGGAAAGACTGGAACGAGCTGTCAGCCGC TGCAGGGACTGGTGGAAAGAGTGGAACGAGCTGTCAGCCGC Direct Loss 0.96888999343492 0 0.44256115 0.4804599 prediction 0.93777998686984 Functional Loss - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17421817 chr6:17421817 nonsynonymous SNV 0.626 4 21 hm5C_associated_SNPs_47665 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:17421805-17421843
64251 chr12 124144076 124144076 1 + C T COAD 124144076 + 124144056 124144096 41 CTTGCAGGCTTGTGACATCACGGGAGGACTGTACCTGAAGG CTTGCAGGCTTGTGACATCATGGGAGGACTGTACCTGAAGG Direct Loss 0.968772441390272 0 0.9200134 0.88123834 prediction 0.937544882780543 Functional Loss - GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144076 chr12:124144076 nonsynonymous SNV 0.936 4 21 hm5C_associated_SNPs_47669 0 0 15 DGCR8 POSTAR2 GSE39086,GSM955513 chr12:124144060-124144080
64251 chr5 14665063 14665063 1 + C G rs552866272 14665063 + 14665043 14665083 41 GCCAGCGGGCAGCCGCGGCCCGAGATGCAGTGCCCGGCCGA GCCAGCGGGCAGCCGCGGCCGGAGATGCAGTGCCCGGCCGA Direct Loss 0.968731083609208 0 0.7533667 0.89353746 prediction 0.937462167218417 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14665063 chr5:14665063 synonymous SNV . 0 21 hm5C_associated_SNPs_47673 0 0 3 BUD13 POSTAR2 ENCODE chr5:14665048-14665214
64251 chr6 27833315 27833315 1 + C G rs41269275 27833315 + 27833295 27833335 41 GTGCTGGAGTACCTGACTGCCGAGATCCTGGAGCTGGCGGG GTGCTGGAGTACCTGACTGCGGAGATCCTGGAGCTGGCGGG Direct Loss 0.968730230251037 0 0.8968317 0.8888128 prediction 0.937460460502075 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833315 chr6:27833315 synonymous SNV . 0 21 hm5C_associated_SNPs_47674 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27833282-27833320
64251 chr5 79950719 79950719 1 + C T rs201149584 79950719 + 79950699 79950739 41 TGCAGCGGCTGCAGCGGCCGCAGCGGCCGCAGCGCCCCCAG TGCAGCGGCTGCAGCGGCCGTAGCGGCCGCAGCGCCCCCAG Direct Loss 0.968726920753712 0 0.9090061 0.8635155 prediction 0.937453841507424 Functional Loss - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79950719 chr5:79950719 nonsynonymous SNV 0.091 1 21 hm5C_associated_SNPs_47675 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:79950718-79950719
64251 chr6 43096852 43096852 1 + C T SKCM 43096852 + 43096832 43096872 41 TGCTCGATGGGGCCCCTGTCCAGGACACGGAGCGGCGTTTC TGCTCGATGGGGCCCCTGTCTAGGACACGGAGCGGCGTTTC Direct Loss 0.968689209922813 0 0.8989989 0.879248 prediction 0.937378419845626 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096852 chr6:43096852 stopgain 0.971 0 21 hm5C_associated_SNPs_47678 0 0 4 DDX3X POSTAR2 ENCODE chr6:43096846-43096923
64251 chrX 118708942 118708942 1 + C T SKCM 118708942 + 118708922 118708962 41 GTGTGGAACGCGGTCATTTTCGGGTGAGTCTGCGTTCGTGG GTGTGGAACGCGGTCATTTTTGGGTGAGTCTGCGTTCGTGG Direct Loss 0.968668154234737 0 0.9257392 0.88582444 prediction 0.937336308469473 Functional Loss - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118708942 chrX:118708942 synonymous SNV . 0 21 hm5C_associated_SNPs_47680 0 0 6 BUD13 POSTAR2 ENCODE chrX:118708858-118708993
64251 chr3 196295871 196295871 1 + C G rs558273863 196295871 + 196295851 196295891 41 AGGCGATGGCGGCGCCGGCCCCGGGGGCTGGGGCAGCCTCG AGGCGATGGCGGCGCCGGCCGCGGGGGCTGGGGCAGCCTCG Direct Loss 0.96866537567335 0 0.9201385 0.92463565 prediction 0.9373307513467 Functional Loss - FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196295871 chr3:196295871 nonsynonymous SNV 0.479 1 21 hm5C_associated_SNPs_47681 0 0 5 DDX3X POSTAR2 ENCODE chr3:196295867-196295895
64251 chr3 138669284 138669284 1 + C T UCEC 138669284 + 138669264 138669304 41 TCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCCGGC TCCGCTGTCCCCTTTCCTAGTGGGACCCCGAAACACCCGGC Direct Loss 0.968632398118524 0 0.92041624 0.21886039 prediction 0.937264796237048 Functional Loss - FOXL2NB ENSG00000206262 CDS Human protein_coding chr3:138669284 chr3:138669284 nonsynonymous SNV 0.004 1 21 hm5C_associated_SNPs_47683 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:138669272-138669332
64251 chr13 21751268 21751268 1 + C T LUSC 21751268 + 21751248 21751288 41 GTGCGCAGGAGGGAGGCCTTCGAGGCCATAAAGGCGGCCGC GTGCGCAGGAGGGAGGCCTTTGAGGCCATAAAGGCGGCCGC Direct Loss 0.968628790637064 0 0.91109717 0.8742013 prediction 0.937257581274127 Functional Loss - MRPL57 ENSG00000173141 CDS Human protein_coding chr13:21751268 chr13:21751268 synonymous SNV . 0 21 hm5C_associated_SNPs_47684 0 0 6 DDX3X POSTAR2 ENCODE chr13:21751066-21751297
64251 chr19 1272363 1272363 1 + C A BLCA 1272363 + 1272343 1272383 41 GCCGCGCCCTGGTCTGGCCTCTGGGGTGAAGCTGCCTCTTG GCCGCGCCCTGGTCTGGCCTATGGGGTGAAGCTGCCTCTTG Direct Loss 0.968605228080771 0 0.90190655 0.90174925 prediction 0.937210456161541 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272363 chr19:1272363 nonsynonymous SNV 0.006 1 21 hm5C_associated_SNPs_47686 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1272349-1272388
64251 chr12 88442981 88442981 1 + C T BRCA 88442981 + 88442961 88443001 41 TTAGTAAATGGGGAAATTAACAGGACTTTCTTCTTCATCTT TTAGTAAATGGGGAAATTAATAGGACTTTCTTCTTCATCTT Direct Loss 0.968591941844513 0 0.92108667 0.8386888 prediction 0.937183883689025 Functional Loss - CEP290 ENSG00000198707 CDS Human protein_coding chr12:88442981 chr12:88442981 nonsynonymous SNV 0.979 0 21 hm5C_associated_SNPs_47688 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:88442956-88442983
64251 chr11 61897770 61897770 1 + C A KIRC 61897770 + 61897750 61897790 41 GGGCGGTCTGCGTCTAAGCTCAGGATTGCGCAGGTCTCCCC GGGCGGTCTGCGTCTAAGCTAAGGATTGCGCAGGTCTCCCC Direct Loss 0.968518846700319 0 0.8660767 0.44906327 prediction 0.937037693400638 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897770 chr11:61897770 synonymous SNV . 0 21 hm5C_associated_SNPs_47689 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:61897760-61897780
64251 chr6 2766027 2766027 1 + C T rs186673310 2766027 + 2766007 2766047 41 GCGGCCGGGTCGCACCGCGCCGGGGAGCGGGCCAAGGGGCC GCGGCCGGGTCGCACCGCGCTGGGGAGCGGGCCAAGGGGCC Direct Loss 0.968513156390863 0 0.90994966 0.881639 prediction 0.937026312781727 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2766027 chr6:2766027 synonymous SNV . 0 21 hm5C_associated_SNPs_47690 0 0 2 DDX3X POSTAR2 ENCODE chr6:2766019-2766060
64251 chr3 182511351 182511351 1 + C G rs10222374 182511351 + 182511331 182511371 41 GCGCCGGGCGGGGGCGGCGCCGGGGCCGCGCCTGTAGGACT GCGCCGGGCGGGGGCGGCGCGGGGGCCGCGCCTGTAGGACT Direct Loss 0.968379674955888 0 0.9271661 0.9286833 prediction 0.936759349911776 Functional Loss - ATP11B ENSG00000058063 UTR5 Human protein_coding chr3:182511351 chr3:182511351 . . 0 21 hm5C_associated_SNPs_47693 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:182511349-182511382
64251 chr1 3390014 3390014 1 + C T COAD 3390014 + 3389994 3390034 41 ATTGAGAGGCGGCCGGCGTGCGGGGGCCTGCCCATGCTCTC ATTGAGAGGCGGCCGGCGTGTGGGGGCCTGCCCATGCTCTC Direct Loss 0.968377062993365 0 0.94782174 0.9262824 prediction 0.936754125986731 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3390014 chr1:3390014 synonymous SNV . 0 21 hm5C_associated_SNPs_47694 0 0 1 PPIG POSTAR2 ENCODE chr1:3390012-3390086
64251 chr17 79991921 79991921 1 + C A rs184321106 79991921 + 79991901 79991941 41 CCCTGGCCCCCGCCGGAGGCCGGGAGGGAGCAGGGTCTCCC CCCTGGCCCCCGCCGGAGGCAGGGAGGGAGCAGGGTCTCCC Direct Loss 0.96836241051178 0 0.922652 0.9223655 prediction 0.936724821023559 Functional Loss - RAC3 ENSG00000169750 UTR3 Human protein_coding chr17:79991921 chr17:79991921 . . 0 21 hm5C_associated_SNPs_47695 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79991700-79991976
64251 chr16 75681685 75681685 1 + C T rs568180789 75681685 + 75681665 75681705 41 AGGCCCAGTGCTGCGCTTCGCGGCAGAGGCGTCTGCGGTGA AGGCCCAGTGCTGCGCTTCGTGGCAGAGGCGTCTGCGGTGA Direct Loss 0.96835559555579 0 0.8521874 0.5439112 prediction 0.93671119111158 Functional Loss - TERF2IP ENSG00000166848 UTR5 Human protein_coding chr16:75681685 chr16:75681685 . . 0 21 hm5C_associated_SNPs_47696 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:75681680-75681700
64251 chr17 79991820 79991820 1 + C G rs116150248 79991820 + 79991800 79991840 41 GGGGAGCGGTGGGGGTGGGCCGGGGGGAAGCATGGGGATGA GGGGAGCGGTGGGGGTGGGCGGGGGGGAAGCATGGGGATGA Direct Loss 0.9683480938038 0 0.91276056 0.9151832 prediction 0.936696187607601 Functional Loss - RAC3 ENSG00000169750 UTR3 Human protein_coding chr17:79991820 chr17:79991820 . . 0 21 hm5C_associated_SNPs_47697 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79991700-79991976
64251 chr9 131679232 131679232 1 + C T rs547486309 131679232 + 131679212 131679252 41 GGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCT GGGCTCTGCGGTGCGGTCCATGGGAGAGCAGGCCTCCAGCT Direct Loss 0.968333067740777 0 0.88987947 0.79868084 prediction 0.936666135481555 Functional Loss - LRRC8A ENSG00000136802 UTR3 Human protein_coding chr9:131679232 chr9:131679232 . . 0 21 hm5C_associated_SNPs_47698 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:131679183-131679253
64251 chr17 79633801 79633801 1 + C T KICH 79633801 + 79633781 79633821 41 GCCTCCCGGCGTGGAGATGGCGGGAGCTGGTCGCGGAGCAG GCCTCCCGGCGTGGAGATGGTGGGAGCTGGTCGCGGAGCAG Direct Loss 0.968328266363272 0 0.8902472 0.77885765 prediction 0.936656532726544 Functional Loss - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79633801 chr17:79633801 nonsynonymous SNV 0.015 2 21 hm5C_associated_SNPs_47700 0 0 8 HNRNPC POSTAR2 SRX1438577 chr17:79633800-79633840
64251 chr5 179023632 179023632 1 + C T UCEC 179023632 + 179023612 179023652 41 AAGCTGCAGCAGGAGCTGGGCGGGAGGATCGGCGCCCTGCA AAGCTGCAGCAGGAGCTGGGTGGGAGGATCGGCGCCCTGCA Direct Loss 0.968264472543972 0 0.9333644 0.9218582 prediction 0.936528945087944 Functional Loss - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179023632 chr5:179023632 synonymous SNV . 0 21 hm5C_associated_SNPs_47706 0 0 5 MTPAP POSTAR2 ENCODE chr5:179023562-179023685
64251 chr14 105715170 105715170 1 + C G rs186857534 105715170 + 105715150 105715190 41 GGCGCGGGGCGCGGCGTCCACAGGCGCCGAGGCTGCCCCCG GGCGCGGGGCGCGGCGTCCAGAGGCGCCGAGGCTGCCCCCG Direct Loss 0.968224677906665 0 0.90759575 0.9118272 prediction 0.936449355813331 Functional Loss - BTBD6 ENSG00000184887;ENSG00000185024 UTR5 Human other chr14:105715170 chr14:105715170 . . 0 21 hm5C_associated_SNPs_47709 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:105715160-105715180
64251 chr2 198570427 198570427 1 + C G BLCA 198570427 + 198570407 198570447 41 ACGAGCACGGGCTGAAGATTCAGCAGGCAGCAGCTACCGCG ACGAGCACGGGCTGAAGATTGAGCAGGCAGCAGCTACCGCG Direct Loss 0.968179289201592 0 0.6070964 0.45453805 prediction 0.936358578403185 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570427 chr2:198570427 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_47713 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:198570391-198570429
64251 chr17 37819335 37819335 1 + C G rs15968 37819335 + 37819315 37819355 41 GCAGGCTGTGGGGTGGAGCACTGGACTCCGGGGCCCCACTG GCAGGCTGTGGGGTGGAGCAGTGGACTCCGGGGCCCCACTG Direct Loss 0.968172081505746 0 0.87729406 0.89774615 prediction 0.936344163011491 Functional Loss - STARD3 ENSG00000131748 UTR3 Human protein_coding chr17:37819335 chr17:37819335 . . 0 21 hm5C_associated_SNPs_47714 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:37819319-37819341
64251 chr22 38271929 38271929 1 + C T SKCM 38271929 + 38271909 38271949 41 ATTTGATGATGCGTCGTTACCAGGATGCCATCCGGGTCTTC ATTTGATGATGCGTCGTTACTAGGATGCCATCCGGGTCTTC Direct Loss 0.96815196396298 0 0.9182489 0.90436494 prediction 0.93630392792596 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38271929 chr22:38271929 stopgain 1.000 1 21 hm5C_associated_SNPs_47715 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:38271916-38271935
64251 chr10 12198980 12198980 1 + C T CESC 12198980 + 12198960 12199000 41 CGGACAAAGTCCGAGCTTTACGGGAGGCTTTTTATCGGCAG CGGACAAAGTCCGAGCTTTATGGGAGGCTTTTTATCGGCAG Direct Loss 0.968143585757668 0 0.84664744 0.7851 prediction 0.936287171515335 Functional Loss - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12198980 chr10:12198980 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_47716 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr10:12198965-12198989
64251 chrX 153609453 153609453 1 + C T COAD 153609453 + 153609433 153609473 41 GGGCTGGGCTGGGCCAGGATCGCCAGGTCCCGCTCTGGGGC GGGCTGGGCTGGGCCAGGATTGCCAGGTCCCGCTCTGGGGC Direct Loss 0.968101705125364 0 0.89506334 0.3461432 prediction 0.936203410250728 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153609453 chrX:153609453 nonsynonymous SNV 0.973 4 21 hm5C_associated_SNPs_47720 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153609417-153609456
64251 chr3 152880648 152880648 1 + C T LUAD 152880648 + 152880628 152880668 41 CGCCGTCGGTGCTGGAGATCCTGGATACGGCGGGCACCGAG CGCCGTCGGTGCTGGAGATCTTGGATACGGCGGGCACCGAG Direct Loss 0.968024005283 0 0.59661657 0.38526857 prediction 0.936048010566001 Functional Loss - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880648 chr3:152880648 synonymous SNV . 0 21 hm5C_associated_SNPs_47724 0 0 3 U2AF2 POSTAR2 GSE61603,GSM1509288 chr3:152880640-152880660
64251 chr8 18079746 18079746 1 + C T rs56379106 18079746 + 18079726 18079766 41 ATCAAGTTGTGAGAAGAAATCGGGGTGGATGGTGTCTCCAG ATCAAGTTGTGAGAAGAAATTGGGGTGGATGGTGTCTCCAG Direct Loss 0.968005932538882 0 0.94527566 0.9175446 prediction 0.936011865077765 Functional Loss - NAT1 ENSG00000171428 CDS Human protein_coding chr8:18079746 chr8:18079746 nonsynonymous SNV 0.046 4 21 hm5C_associated_SNPs_47725 1 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:18079716-18079747
64251 chr2 238990408 238990408 1 + C T COAD 238990408 + 238990388 238990428 41 GCAGAGGTGGACGACATCCTCGCGGCAGTCCGCCCGACCAC GCAGAGGTGGACGACATCCTTGCGGCAGTCCGCCCGACCAC Direct Loss 0.967971466645873 0 0.89466614 0.80489624 prediction 0.935942933291746 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990408 chr2:238990408 synonymous SNV . 0 21 hm5C_associated_SNPs_47728 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:238990408-238990409
64251 chr21 34602261 34602261 1 + C T rs17860248 34602261 + 34602241 34602281 41 CCGTATCGCTCCTCGTAGGCCGGGGCTCGGCGCGCGCACCC CCGTATCGCTCCTCGTAGGCTGGGGCTCGGCGCGCGCACCC Direct Loss 0.967969592127387 0 0.9194429 0.8925606 prediction 0.935939184254774 Functional Loss - IFNAR2 ENSG00000159110 UTR5 Human protein_coding chr21:34602261 chr21:34602261 . . 0 21 hm5C_associated_SNPs_47729 0 0 3 DDX3X POSTAR2 ENCODE chr21:34602239-34602287
64251 chr1 156348012 156348012 1 + C T STAD 156348012 + 156347992 156348032 41 CAGGAGCGTGGGGGTGGGGGCGGGGTGCTGCCTCTCACCCC CAGGAGCGTGGGGGTGGGGGTGGGGTGCTGCCTCTCACCCC Direct Loss 0.9679273209569 0 0.9194089 0.9084245 prediction 0.935854641913801 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348012 chr1:156348012 synonymous SNV . 0 21 hm5C_associated_SNPs_47731 0 0 5 EFTUD2 POSTAR2 ENCODE chr1:156347973-156348122
64251 chr7 44240649 44240649 1 + C T rs534339905 44240649 + 44240629 44240669 41 GCTGAGAGGCCGGTAGGCGGCGGCGGTCCCGAGGGGCGGCG GCTGAGAGGCCGGTAGGCGGTGGCGGTCCCGAGGGGCGGCG Direct Loss 0.96788926997891 0 0.9110213 0.8571887 prediction 0.93577853995782 Functional Loss - YKT6 ENSG00000106636 UTR5 Human protein_coding chr7:44240649 chr7:44240649 . . 0 21 hm5C_associated_SNPs_47735 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:44240626-44240659
64251 chr19 35551628 35551628 1 + C G KIRC 35551628 + 35551608 35551648 41 GGGTGCAGGCTGTGGTCTACCACGGGGGCTATCTTCCCTTT GGGTGCAGGCTGTGGTCTACGACGGGGGCTATCTTCCCTTT Direct Loss 0.967852325614617 0 0.83634514 0.36911494 prediction 0.935704651229234 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35551628 chr19:35551628 nonsynonymous SNV 0.789 5 21 hm5C_associated_SNPs_47739 0 0 1 DDX3X POSTAR2 ENCODE chr19:35551563-35551632
64251 chr6 146865253 146865253 1 + C T KIRC 146865253 + 146865233 146865273 41 CGCCTGCAGCTGTGGGACATCGCGGGTAAGCGCGGCCGCGA CGCCTGCAGCTGTGGGACATTGCGGGTAAGCGCGGCCGCGA Direct Loss 0.967845075839029 0 0.92915285 0.9113078 prediction 0.935690151678058 Functional Loss - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146865253 chr6:146865253 synonymous SNV . 0 21 hm5C_associated_SNPs_47740 0 0 2 DDX3X POSTAR2 ENCODE chr6:146865219-146865258
64251 chr6 150070893 150070893 1 + C T UCEC 150070893 + 150070873 150070913 41 GCGCGCAGTGGCGGCAGCGGCGGCGACGGCAGTAACAGCGG GCGCGCAGTGGCGGCAGCGGTGGCGACGGCAGTAACAGCGG Direct Loss 0.967827641101029 0 0.8902774 0.7787638 prediction 0.935655282202059 Functional Loss - PCMT1 ENSG00000120265 CDS Human protein_coding chr6:150070893 chr6:150070893 synonymous SNV . 0 21 hm5C_associated_SNPs_47741 0 0 4 CNBP POSTAR2 GSE76193,GSM1976310 chr6:150070880-150070900
64251 chr21 45223708 45223708 1 + C T rs73906621 45223708 + 45223688 45223728 41 GCCAGGCCTCGCTTGCACCGCGGGACGAGGCTGACCGGGCT GCCAGGCCTCGCTTGCACCGTGGGACGAGGCTGACCGGGCT Direct Loss 0.967806145065469 0 0.89355356 0.8731991 prediction 0.935612290130939 Functional Loss - RRP1 ENSG00000160214 UTR3 Human protein_coding chr21:45223708 chr21:45223708 . . 0 21 hm5C_associated_SNPs_47743 0 0 26 NUDT21 POSTAR2 GSE37401,GSM917662 chr21:45223700-45223720
64251 chr11 114310284 114310284 1 + C T UCEC 114310284 + 114310264 114310304 41 CCCTGGGCTCCAGGCTGTTGCGGGGTGTAGGTGGGAGTCAC CCCTGGGCTCCAGGCTGTTGTGGGGTGTAGGTGGGAGTCAC Direct Loss 0.967786310456087 0 0.92789716 0.88791114 prediction 0.935572620912173 Functional Loss - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114310284 chr11:114310284 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_47746 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:114310280-114310299
64251 chr19 54695795 54695795 1 + C T BRCA 54695795 + 54695775 54695815 41 GACCAGTGATGGCCAGGCTTCGGGAGAGCAGGAGGAAGCTG GACCAGTGATGGCCAGGCTTTGGGAGAGCAGGAGGAAGCTG Direct Loss 0.967763946696483 0 0.9018655 0.7734918 prediction 0.935527893392967 Functional Loss - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54695795 chr19:54695795 nonsynonymous SNV 0.960 0 21 hm5C_associated_SNPs_47747 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:54695782-54695806
64251 chr8 8860644 8860644 1 + C G rs61736769 8860644 + 8860624 8860664 41 GCTGCTGGAGTCGCCGCGGCCGGAGGGCGGGGAGGAGCCGC GCTGCTGGAGTCGCCGCGGCGGGAGGGCGGGGAGGAGCCGC Direct Loss 0.967746922105595 0 0.92206955 0.9172375 prediction 0.93549384421119 Functional Loss - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8860644 chr8:8860644 nonsynonymous SNV 0.008 1 21 hm5C_associated_SNPs_47749 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:8860644-8860645
64251 chr6 139095001 139095001 1 + C T PRAD 139095001 + 139094981 139095021 41 CTGAGGCTGTCGGGTCTTTGCGGGTTGCGGAAGGGGGCCCC CTGAGGCTGTCGGGTCTTTGTGGGTTGCGGAAGGGGGCCCC Direct Loss 0.967711505962842 0 0.9098538 0.8889768 prediction 0.935423011925684 Functional Loss - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139095001 chr6:139095001 nonsynonymous SNV 0.017 2 21 hm5C_associated_SNPs_47750 0 0 3 DDX3X POSTAR2 ENCODE chr6:139094944-139095041
64251 chr17 40673115 40673115 1 + C T UCEC 40673115 + 40673095 40673135 41 CCTTCTCCTTCGAGCATATTCGGGAAGGGAAGTTTGAAGAG CCTTCTCCTTCGAGCATATTTGGGAAGGGAAGTTTGAAGAG Direct Loss 0.967702525881944 0 0.9185106 0.59676313 prediction 0.935405051763887 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40673115 chr17:40673115 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_47752 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40673071-40673126
64251 chr1 109777925 109777925 1 + C T UCEC 109777925 + 109777905 109777945 41 AGCCCATTGCTGCCCTGCACCGGGATGAGTGGCTCCGGCCG AGCCCATTGCTGCCCTGCACTGGGATGAGTGGCTCCGGCCG Direct Loss 0.967645923475711 0 0.93627787 0.8773775 prediction 0.935291846951422 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109777925 chr1:109777925 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_47756 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr1 100731936 100731936 1 + C T UCEC 100731936 + 100731916 100731956 41 CCCCAGGGTGTCCCCCATGGCGGGGCCGCGGGTGGAGGTCG CCCCAGGGTGTCCCCCATGGTGGGGCCGCGGGTGGAGGTCG Direct Loss 0.967610013080136 0 0.9056907 0.8204881 prediction 0.935220026160272 Functional Loss - RTCA ENSG00000137996 CDS Human protein_coding chr1:100731936 chr1:100731936 nonsynonymous SNV 0.797 0 21 hm5C_associated_SNPs_47758 0 0 8 BUD13 POSTAR2 ENCODE chr1:100731925-100731988
64251 chr4 1347003 1347003 1 + C T PRAD 1347003 + 1346983 1347023 41 GGTCTGGCACCCCTGACCCCCGGGACGGGGAGCAGCCCTGC GGTCTGGCACCCCTGACCCCTGGGACGGGGAGCAGCCCTGC Direct Loss 0.967600830677726 0 0.80388415 0.4274295 prediction 0.935201661355452 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347003 chr4:1347003 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_47759 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:1346985-1347023
64251 chr8 48921026 48921026 1 + C T CESC 48921026 + 48921006 48921046 41 CAGGAGAAGATGGCGGTCTCCACAGGTCGGTTCCCGGGCCG CAGGAGAAGATGGCGGTCTCTACAGGTCGGTTCCCGGGCCG Direct Loss 0.967599847781369 0 0.82052445 0.82552975 prediction 0.935199695562739 Functional Loss - UBE2V2 ENSG00000169139 CDS Human protein_coding chr8:48921026 chr8:48921026 synonymous SNV . 0 21 hm5C_associated_SNPs_47760 0 0 1 DGCR8 POSTAR2 ENCODE chr8:48920999-48921031
64251 chr19 50357725 50357725 1 + C T LUSC 50357725 + 50357705 50357745 41 TCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGA TCCTCACCTGGGCTCACCCTTGGGGGTCTGGCCGTGAGCGA Direct Loss 0.967553858930426 0 0.9589544 0.92901444 prediction 0.935107717860852 Functional Loss - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50357725 chr19:50357725 synonymous SNV . 0 21 hm5C_associated_SNPs_47763 0 0 6 BUD13 POSTAR2 ENCODE chr19:50357713-50357736
64251 chr6 27777950 27777950 1 + C T BLCA 27777950 + 27777930 27777970 41 CGGAAGAGCGCTCCGGCCACCGGCGGTGTCAAGAAGCCCCA CGGAAGAGCGCTCCGGCCACTGGCGGTGTCAAGAAGCCCCA Direct Loss 0.967539353494425 0 0.89591014 0.7021649 prediction 0.935078706988849 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27777950 chr6:27777950 synonymous SNV . 0 21 hm5C_associated_SNPs_47766 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr22 42473682 42473682 1 + C A PRAD 42473682 + 42473662 42473702 41 GCTACATGCGCCTGGTGGTACGCGAGTTGGAGAGCCAGTTG GCTACATGCGCCTGGTGGTAAGCGAGTTGGAGAGCCAGTTG Direct Loss 0.967504284121257 0 0.8850802 0.8808533 prediction 0.935008568242514 Functional Loss - FAM109B ENSG00000177096 CDS Human protein_coding chr22:42473682 chr22:42473682 nonsynonymous SNV 0.601 1 21 hm5C_associated_SNPs_47767 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr22:42473677-42473691
64251 chr6 43029098 43029098 1 + C T COAD 43029098 + 43029078 43029118 41 CAGGCCTGGTGTTGGGGCAGCGGGATGAGCCTGCAGGCCAC CAGGCCTGGTGTTGGGGCAGTGGGATGAGCCTGCAGGCCAC Direct Loss 0.967460765544236 0 0.91505027 0.90974796 prediction 0.934921531088472 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43029098 chr6:43029098 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_47772 0 0 8 DDX3X POSTAR2 ENCODE chr6:43029046-43029168
64251 chr5 141305002 141305002 1 + C T COAD 141305002 + 141304982 141305022 41 CCCCATGGCCCAGGCACGAGCGGGGGTCCAAGGTCCCATGG CCCCATGGCCCAGGCACGAGTGGGGGTCCAAGGTCCCATGG Direct Loss 0.967430617532664 0 0.9459433 0.9122199 prediction 0.934861235065328 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141305002 chr5:141305002 synonymous SNV . 0 21 hm5C_associated_SNPs_47774 0 0 3 DDX24 POSTAR2 ENCODE chr5:141304973-141305065
64251 chr6 17601213 17601213 1 + C T rs61736671 17601213 + 17601193 17601233 41 CCTGACCCGCGGACAGCTGCCGGCATCAGCACCCCTGCTCC CCTGACCCGCGGACAGCTGCTGGCATCAGCACCCCTGCTCC Direct Loss 0.967342992765964 0 0.9127804 0.89016163 prediction 0.934685985531928 Functional Loss - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17601213 chr6:17601213 synonymous SNV . 0 21 hm5C_associated_SNPs_47777 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:17601193-17601219
64251 chr11 120196015 120196015 1 + C G rs80100651 120196015 + 120195995 120196035 41 GCTCCTCCGCTTCCTGTTGCCGCGATCCGGGCCGGGAGCTG GCTCCTCCGCTTCCTGTTGCGGCGATCCGGGCCGGGAGCTG Direct Loss 0.967323636371671 0 0.8801122 0.92465186 prediction 0.934647272743342 Functional Loss - TMEM136 ENSG00000181264 UTR5 Human protein_coding chr11:120196015 chr11:120196015 . . 0 21 hm5C_associated_SNPs_47779 0 0 4 DDX3X POSTAR2 ENCODE chr11:120196009-120196057
64251 chr11 63990890 63990890 1 + C A COAD 63990890 + 63990870 63990910 41 GCTACATTTTCCTGTCGACGCGGGAGCGGGCCCGTGGGGAG GCTACATTTTCCTGTCGACGAGGGAGCGGGCCCGTGGGGAG Direct Loss 0.967271544272271 0 0.56105316 0.53174704 prediction 0.934543088544542 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63990890 chr11:63990890 synonymous SNV . 0 21 hm5C_associated_SNPs_47781 0 0 2 DROSHA POSTAR2 ENCODE chr11:63990887-63990943
64251 chr4 17625374 17625374 1 + C T LGG 17625374 + 17625354 17625394 41 CTCAGGGCTCCTTGGCCTACCTGGAGCAGGCATCTGCCAAC CTCAGGGCTCCTTGGCCTACTTGGAGCAGGCATCTGCCAAC Direct Loss 0.967267906442078 0 0.4140194 0.5325451 prediction 0.934535812884157 Functional Loss - MED28 ENSG00000118579 CDS Human protein_coding chr4:17625374 chr4:17625374 synonymous SNV . 0 21 hm5C_associated_SNPs_47782 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:17625347-17625377
64251 chr5 135388723 135388723 1 + C T UCEC 135388723 + 135388703 135388743 41 GGGGACATGCTCACTATCAACGGGAAGGCGATCATCTCCAA GGGGACATGCTCACTATCAATGGGAAGGCGATCATCTCCAA Direct Loss 0.967222465050119 0 0.82915485 0.40315518 prediction 0.934444930100238 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135388723 chr5:135388723 synonymous SNV . 0 21 hm5C_associated_SNPs_47785 0 0 4 LIN28B POSTAR2 ENCODE chr5:135388595-135388724
64251 chr22 39918236 39918236 1 + C G CESC 39918236 + 39918216 39918256 41 GTATGAGCCCAGAGTCCTATCTGGGGTCTCCTCAGCACAGC GTATGAGCCCAGAGTCCTATGTGGGGTCTCCTCAGCACAGC Direct Loss 0.967194608797349 0 0.61099195 0.33847645 prediction 0.934389217594699 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918236 chr22:39918236 nonsynonymous SNV 0.091 0 21 hm5C_associated_SNPs_47786 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918197-39918365
64251 chr22 35730359 35730359 1 + C A UCEC 35730359 + 35730339 35730379 41 TGAGAGCTGGCCTGCAGTCTCTGGAGGCCTCTGGTCGACTG TGAGAGCTGGCCTGCAGTCTATGGAGGCCTCTGGTCGACTG Direct Loss 0.967192873281422 0 0.8663692 0.4321898 prediction 0.934385746562844 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35730359 chr22:35730359 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_47787 0 0 2 SF3B1 POSTAR2 ENCODE chr22:35730333-35730365
64251 chr12 125550167 125550167 1 + C A UCEC 125550167 + 125550147 125550187 41 GCCCCGGTCGGGAGGAGATCCTGGAGTGCCAGGTGATGTGG GCCCCGGTCGGGAGGAGATCATGGAGTGCCAGGTGATGTGG Direct Loss 0.967147782501211 0 0.90147865 0.8879017 prediction 0.934295565002422 Functional Loss - AACS ENSG00000081760 CDS Human protein_coding chr12:125550167 chr12:125550167 nonsynonymous SNV 0.931 0 21 hm5C_associated_SNPs_47791 0 0 1 RPS3 POSTAR2 ENCODE chr12:125550150-125550224
64251 chr14 24108151 24108151 1 + C A rs142650346 24108151 + 24108131 24108171 41 TCTGTGAGGATGAGCAGCACCGGGATAGACAGGAAGGGCGT TCTGTGAGGATGAGCAGCACAGGGATAGACAGGAAGGGCGT Direct Loss 0.967124781535611 0 0.87418497 0.7735249 prediction 0.934249563071222 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108151 chr14:24108151 synonymous SNV . 0 21 hm5C_associated_SNPs_47792 0 0 4 GRWD1 POSTAR2 ENCODE chr14:24108126-24108159
64251 chr11 65479743 65479743 1 + C T COAD 65479743 + 65479723 65479763 41 AGTGGAGGGAGGGAAGATGGCGGAGGTGGTGAGTCCGGTGC AGTGGAGGGAGGGAAGATGGTGGAGGTGGTGAGTCCGGTGC Direct Loss 0.967093842517747 0 0.8885646 0.7630222 prediction 0.934187685035494 Functional Loss - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65479743 chr11:65479743 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47794 0 0 2 NCBP2 POSTAR2 ENCODE chr11:65479738-65479800
64251 chr6 138725715 138725715 1 + C G rs377430480 138725715 + 138725695 138725735 41 GACGCCGGGCTGGAAGGCCCCGGAGGACGCCGGCCCCCAGG GACGCCGGGCTGGAAGGCCCGGGAGGACGCCGGCCCCCAGG Direct Loss 0.967037748596254 0 0.9050224 0.89895964 prediction 0.934075497192507 Functional Loss - HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138725715 chr6:138725715 nonsynonymous SNV 0.060 0 21 hm5C_associated_SNPs_47799 0 0 7 DDX3X POSTAR2 ENCODE chr6:138725454-138725732
64251 chr8 23429144 23429144 1 + C A LUAD 23429144 + 23429124 23429164 41 GTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCTCTCG GTAAGACCCTTCTGAACACTAAGGAGAACGTGGCCCTCTCG Direct Loss 0.966984083342991 0 0.9351804 0.90050495 prediction 0.933968166685981 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429144 chr8:23429144 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_47801 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr12 48358029 48358029 1 + C A BLCA 48358029 + 48358009 48358049 41 ATATCACGGCCATGGGGTCTCAGCATTCCGCTGCTGCTCGC ATATCACGGCCATGGGGTCTAAGCATTCCGCTGCTGCTCGC Direct Loss 0.966977199124646 0 0.51229465 0.245401 prediction 0.933954398249292 Functional Loss - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48358029 chr12:48358029 nonsynonymous SNV 0.993 0 21 hm5C_associated_SNPs_47802 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:48357993-48358031
64251 chr11 65771217 65771217 1 + C T GBM 65771217 + 65771197 65771237 41 GGGACTGCTTCGGATGCCTTCGAGAGTGGTGCGACGCCTTC GGGACTGCTTCGGATGCCTTTGAGAGTGGTGCGACGCCTTC Direct Loss 0.966931358472495 0 0.9095167 0.6478343 prediction 0.933862716944991 Functional Loss - BANF1 ENSG00000175334 CDS Human protein_coding chr11:65771217 chr11:65771217 stopgain 1.000 1 21 hm5C_associated_SNPs_47806 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65771171-65771233
64251 chrX 48458940 48458940 1 + C T CESC 48458940 + 48458920 48458960 41 CTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACCCCGAT CTGAGGATGGTCGCTGCATCTGAGAGATCCCTGACCCCGAT Direct Loss 0.966917815564358 0 0.72561944 0.5522396 prediction 0.933835631128716 Functional Loss - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48458940 chrX:48458940 stopgain 1.000 1 21 hm5C_associated_SNPs_47808 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chrX:48458922-48458943
64251 chr2 113343594 113343594 1 + C A UCEC 113343594 + 113343574 113343614 41 CTCGCTACTGTGGCCGGGAGCTGGAGCAGTATGGCCAGTGT CTCGCTACTGTGGCCGGGAGATGGAGCAGTATGGCCAGTGT Direct Loss 0.96680998546016 0 0.89926326 0.8234576 prediction 0.93361997092032 Functional Loss - CHCHD5 ENSG00000125611 CDS Human protein_coding chr2:113343594 chr2:113343594 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_47814 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:113343567-113343602
64251 chr19 35491265 35491265 1 + C T rs565580041 35491265 + 35491245 35491285 41 GGTCGGGTGGGGGCGGCGGCCGCGGAAGGCCAGGCCGGTGC GGTCGGGTGGGGGCGGCGGCTGCGGAAGGCCAGGCCGGTGC Direct Loss 0.966802958226028 0 0.9213314 0.91793215 prediction 0.933605916452056 Functional Loss - GRAMD1A ENSG00000089351 UTR5 Human protein_coding chr19:35491265 chr19:35491265 . . 0 21 hm5C_associated_SNPs_47816 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:35491241-35491266
64251 chr22 46685380 46685380 1 + C T rs11705624 46685380 + 46685360 46685400 41 GCCCTGGTGGAGGCTGAGGACGGGAACCCTGACCGCGTCCT GCCCTGGTGGAGGCTGAGGATGGGAACCCTGACCGCGTCCT Direct Loss 0.966747792811256 0 0.8909798 0.7601962 prediction 0.933495585622513 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46685380 chr22:46685380 synonymous SNV . 0 21 hm5C_associated_SNPs_47823 0 0 3 RPS3 POSTAR2 ENCODE chr22:46685314-46685404
64251 chr8 75276514 75276514 1 + C T COAD 75276514 + 75276494 75276534 41 CCTTGTGGTTGGTTTGCTTGCAGGAGTGGGATATTTTGCTT CCTTGTGGTTGGTTTGCTTGTAGGAGTGGGATATTTTGCTT Direct Loss 0.966737630059023 0 0.89315045 0.7095358 prediction 0.933475260118045 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75276514 chr8:75276514 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_47825 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:75276496-75276523
64251 chr12 58152517 58152517 1 + C G CESC 58152517 + 58152497 58152537 41 CTCACGGACGGGCCCCACCTCTGGGGCCACGAGCCGCCCCC CTCACGGACGGGCCCCACCTGTGGGGCCACGAGCCGCCCCC Direct Loss 0.966711774976613 0 0.9006715 0.878905 prediction 0.933423549953226 Functional Loss - MARCH9 ENSG00000139266 CDS Human protein_coding chr12:58152517 chr12:58152517 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_47831 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:58152480-58152520
64251 chr20 43547605 43547605 1 + C T LUSC 43547605 + 43547585 43547625 41 CGGAGCTGGGGGCGCGGGCCCTGGAGTTCACCAACATCTAC CGGAGCTGGGGGCGCGGGCCTTGGAGTTCACCAACATCTAC Direct Loss 0.966689712015549 0 0.71608555 0.6986429 prediction 0.933379424031097 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547605 chr20:43547605 synonymous SNV . 0 21 hm5C_associated_SNPs_47834 0 0 1 PPIG POSTAR2 ENCODE chr20:43547558-43547610
64251 chr1 109419670 109419670 1 + C G rs115082541 109419670 + 109419650 109419690 41 TAGGTGGCGGAGGGACGCTCCGGGAAAGCGAGGGGCGCTAC TAGGTGGCGGAGGGACGCTCGGGGAAAGCGAGGGGCGCTAC Direct Loss 0.966628785527331 0 0.90364087 0.9173074 prediction 0.933257571054662 Functional Loss - GPSM2 ENSG00000121957 UTR5 Human protein_coding chr1:109419670 chr1:109419670 . . 0 21 hm5C_associated_SNPs_47838 0 0 2 DDX3X POSTAR2 ENCODE chr1:109419648-109419854
64251 chr10 74034073 74034073 1 + C T rs11539947 74034073 + 74034053 74034093 41 GATCGGCCGCCGCGCTCAGCCTGGGGGTCGGCGACCCGGGA GATCGGCCGCCGCGCTCAGCTTGGGGGTCGGCGACCCGGGA Direct Loss 0.966565422786509 0 0.9063225 0.91048944 prediction 0.933130845573018 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034073 chr10:74034073 synonymous SNV . 0 21 hm5C_associated_SNPs_47843 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:74034072-74034073
64251 chr12 69651614 69651614 1 + C T SKCM 69651614 + 69651594 69651634 41 TAGAGGACGGGGCCGTTTTCCAGGGGCTGTTCCTGGTGGGG TAGAGGACGGGGCCGTTTTCTAGGGGCTGTTCCTGGTGGGG Direct Loss 0.966530009072595 0 0.95940006 0.93726945 prediction 0.933060018145189 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69651614 chr12:69651614 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_47847 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:69651511-69651671
64251 chrX 47032563 47032563 1 + C T UCEC 47032563 + 47032543 47032583 41 AGTCGCACGGCGTGCAAGCACGGGAGGTTCGGCTGATGCGG AGTCGCACGGCGTGCAAGCATGGGAGGTTCGGCTGATGCGG Direct Loss 0.966520508728313 0 0.9065907 0.8900546 prediction 0.933041017456627 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47032563 chrX:47032563 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47848 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:47032561-47032586
64251 chr5 78532658 78532658 1 + C G rs3733893 78532658 + 78532638 78532678 41 GAGCGGCTCCCGGGAGCAAGCGGGGGCGCGAGGGGGCGCCG GAGCGGCTCCCGGGAGCAAGGGGGGGCGCGAGGGGGCGCCG Direct Loss 0.966397115467384 0 0.95301956 0.9297576 prediction 0.932794230934768 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78532658 chr5:78532658 nonsynonymous SNV 0.988 0 21 hm5C_associated_SNPs_47856 0 0 1 FXR2 POSTAR2 ENCODE chr5:78532647-78532674
64251 chr2 220099691 220099691 1 + C A HNSC 220099691 + 220099671 220099711 41 AGAAGGAGAAAAGCCGAGACCAGGAGGCTGGGGCACATCGG AGAAGGAGAAAAGCCGAGACAAGGAGGCTGGGGCACATCGG Direct Loss 0.966374846493136 0 0.91407263 0.8873673 prediction 0.932749692986272 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220099691 chr2:220099691 nonsynonymous SNV 0.032 0 21 hm5C_associated_SNPs_47857 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:220099670-220099705
64251 chr19 33072102 33072102 1 + C G rs75928255 33072102 + 33072082 33072122 41 GCGAGCGCCTGCGCAGTGGTCAAGGCCGCGCTCGCGCCGAG GCGAGCGCCTGCGCAGTGGTGAAGGCCGCGCTCGCGCCGAG Direct Loss 0.966343901024946 0 0.897685 0.817536 prediction 0.932687802049891 Functional Loss - PDCD5 ENSG00000105185 UTR5 Human protein_coding chr19:33072102 chr19:33072102 . . 0 21 hm5C_associated_SNPs_47860 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:33072100-33072220
64251 chr17 76134191 76134191 1 + C T SKCM 76134191 + 76134171 76134211 41 GTGGCGGGGCAGACGGTCACCTGGATGGGCCTCTTCTACTG GTGGCGGGGCAGACGGTCACTTGGATGGGCCTCTTCTACTG Direct Loss 0.966327579661039 0 0.5340781 0.4021894 prediction 0.932655159322078 Functional Loss - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76134191 chr17:76134191 synonymous SNV . 0 21 hm5C_associated_SNPs_47861 0 0 1 DDX24 POSTAR2 ENCODE chr17:76134186-76134270
64251 chr3 10157440 10157440 1 + C T BRCA 10157440 + 10157420 10157460 41 TTCACCAGGACTGGGCTAACCGGGAGTACATTGAGATAATC TTCACCAGGACTGGGCTAACTGGGAGTACATTGAGATAATC Direct Loss 0.966324746928973 0 0.89549077 0.8855976 prediction 0.932649493857945 Functional Loss - BRK1 ENSG00000254999 CDS Human protein_coding chr3:10157440 chr3:10157440 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_47862 0 0 48 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:10157440-10157460
64251 chr19 518957 518957 1 + C A rs117112129 518957 + 518937 518977 41 CGGCGGGCGCAGGAAGAGGCCGGGGCTGGACGGGCGCACCT CGGCGGGCGCAGGAAGAGGCAGGGGCTGGACGGGCGCACCT Direct Loss 0.966264653774862 0 0.90415 0.9150775 prediction 0.932529307549725 Functional Loss - TPGS1 ENSG00000141933 CDS Human protein_coding chr19:518957 chr19:518957 nonsynonymous SNV 0.975 1 21 hm5C_associated_SNPs_47869 0 0 1 CSTF2T POSTAR2 ENCODE chr19:518913-518975
64251 chr12 108956450 108956450 1 + C A rs142514490 108956450 + 108956430 108956470 41 GGGCGGCATCGGCTCTGCTGCTGCGGAGCCCCCGCCTGCCC GGGCGGCATCGGCTCTGCTGATGCGGAGCCCCCGCCTGCCC Direct Loss 0.966210075395606 0 0.8571076 0.8373334 prediction 0.932420150791212 Functional Loss - ISCU ENSG00000136003 CDS Human protein_coding chr12:108956450 chr12:108956450 nonsynonymous SNV 0.844 1 21 hm5C_associated_SNPs_47875 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:108956449-108956507
64251 chr16 89650455 89650455 1 + C T BLCA 89650455 + 89650435 89650475 41 GGTGATCGCCGAGGACATCTCGGGGAACAACGGCTACGTGG GGTGATCGCCGAGGACATCTTGGGGAACAACGGCTACGTGG Direct Loss 0.96620958615539 0 0.9470296 0.91913337 prediction 0.93241917231078 Functional Loss - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89650455 chr16:89650455 nonsynonymous SNV 0.971 2 21 hm5C_associated_SNPs_47876 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:89650440-89650480
64251 chr8 37963121 37963121 1 + C G rs199684478 37963121 + 37963101 37963141 41 AGCGGGTGCCGGGCCTGGCCCAGGAGCGGTCGCAAATGCAA AGCGGGTGCCGGGCCTGGCCGAGGAGCGGTCGCAAATGCAA Direct Loss 0.966174978138186 0 0.6034286 0.57421964 prediction 0.932349956276371 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37963121 chr8:37963121 nonsynonymous SNV 0.020 1 21 hm5C_associated_SNPs_47881 0 0 6 DDX3X POSTAR2 ENCODE chr8:37963067-37963122
64251 chr3 127788409 127788409 1 + C T rs147269024 127788409 + 127788389 127788429 41 GGCGCCATTGGGTCTGGAACCGGGATCCTGCTCGCAGTCAC GGCGCCATTGGGTCTGGAACTGGGATCCTGCTCGCAGTCAC Direct Loss 0.96610345369286 0 0.9072597 0.78515327 prediction 0.93220690738572 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127788409 chr3:127788409 synonymous SNV . 0 21 hm5C_associated_SNPs_47885 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:127788345-127788415
64251 chr10 74034674 74034674 1 + C T UCEC 74034674 + 74034654 74034694 41 ACAGCGAGCCGTGCGGCCTGCGGGGGGCGCTGCTGGACGTC ACAGCGAGCCGTGCGGCCTGTGGGGGGCGCTGCTGGACGTC Direct Loss 0.966091359576394 0 0.9264111 0.9041521 prediction 0.932182719152789 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034674 chr10:74034674 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47886 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:74034633-74034689
64251 chr1 248020615 248020615 1 + C T SKCM 248020615 + 248020595 248020635 41 GCCCGGTGTGCCTGGATTTCCTGCAGGAGCCGGTCAGCGTG GCCCGGTGTGCCTGGATTTCTTGCAGGAGCCGGTCAGCGTG Direct Loss 0.966085168917317 0 0.36701778 0.4643764 prediction 0.932170337834633 Functional Loss - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248020615 chr1:248020615 synonymous SNV . 0 21 hm5C_associated_SNPs_47887 0 0 6 DDX3X POSTAR2 ENCODE chr1:248020506-248020688
64251 chr4 83978134 83978134 1 + C T BLCA 83978134 + 83978114 83978154 41 TGAAGATTGCTAGGCTATATCTGGAGGATGATGATCCAGTC TGAAGATTGCTAGGCTATATTTGGAGGATGATGATCCAGTC Direct Loss 0.966074206614877 0 0.9077805 0.9086032 prediction 0.932148413229755 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83978134 chr4:83978134 synonymous SNV . 0 21 hm5C_associated_SNPs_47888 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr4:83978096-83978167
64251 chr19 11998756 11998756 1 + C T rs3810315 11998756 + 11998736 11998776 41 GCTATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGACCC GCTATGCCCTGCTGTAGTCATAGGAGGTGTAGAGAGGACCC Direct Loss 0.966067600614944 0 0.8922601 0.8945484 prediction 0.932135201229887 Functional Loss - ZNF69 ENSG00000198429 CDS Human protein_coding chr19:11998756 chr19:11998756 synonymous SNV . 0 21 hm5C_associated_SNPs_47890 0 0 2 TARBP2 POSTAR2 GSE49648,GSM1204358 chr19:11998740-11998760
64251 chr7 75609790 75609790 1 + C T COAD 75609790 + 75609770 75609810 41 GGAGACAGACGTGGATCTCTCTGGGGTCAAGTTCGCGGTGA GGAGACAGACGTGGATCTCTTTGGGGTCAAGTTCGCGGTGA Direct Loss 0.966043421476211 0 0.930301 0.913116 prediction 0.932086842952422 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75609790 chr7:75609790 nonsynonymous SNV 0.542 3 21 hm5C_associated_SNPs_47896 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:75609773-75609800
64251 chr19 17379780 17379780 1 + C T rs144376330 17379780 + 17379760 17379800 41 AGCGAGGGTGAGGGTGAGGCCGCCAGTGCTGATGATGGGAG AGCGAGGGTGAGGGTGAGGCTGCCAGTGCTGATGATGGGAG Direct Loss 0.966012589667583 0 0.73461425 0.28529155 prediction 0.932025179335166 Functional Loss - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17379780 chr19:17379780 synonymous SNV . 0 21 hm5C_associated_SNPs_47897 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr19:17379758-17379785
64251 chr7 6661703 6661703 1 + C T rs555355114 6661703 + 6661683 6661723 41 AGCGGCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCAGCAG AGCGGCAGCTGCAGCTCAAATTGCAGGAGGAGCTGCAGCAG Direct Loss 0.966008239184718 0 0.45734015 0.5577387 prediction 0.932016478369437 Functional Loss - ZNF853 ENSG00000236609 CDS Human protein_coding chr7:6661703 chr7:6661703 synonymous SNV . 0 21 hm5C_associated_SNPs_47898 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:6661696-6661720
64251 chr1 112298569 112298569 1 + C T BLCA 112298569 + 112298549 112298589 41 GGCGGCGGCATTTGAAGCCTCGGGAGCCTTAGCAGCAGTGG GGCGGCGGCATTTGAAGCCTTGGGAGCCTTAGCAGCAGTGG Direct Loss 0.965998076933988 0 0.92873335 0.9100745 prediction 0.931996153867975 Functional Loss - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112298569 chr1:112298569 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_47899 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:112298560-112298580
64251 chr1 154207205 154207205 1 + C T COAD 154207205 + 154207185 154207225 41 GACGTGGTGGGCCACCAAGACGGGGGAGAGGTGCCAGCCGT GACGTGGTGGGCCACCAAGATGGGGGAGAGGTGCCAGCCGT Direct Loss 0.965927953496966 0 0.8993958 0.8551204 prediction 0.931855906993932 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154207205 chr1:154207205 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47901 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:154207200-154207232
64251 chr17 42266703 42266703 1 + C T UCEC 42266703 + 42266683 42266723 41 CTGAAGAGGCGGGTGAAGGTCGGGGAGACTCCACTGGGGAG CTGAAGAGGCGGGTGAAGGTTGGGGAGACTCCACTGGGGAG Direct Loss 0.965873607916141 0 0.9378562 0.8215302 prediction 0.931747215832282 Functional Loss - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266703 chr17:42266703 nonsynonymous SNV 0.971 1 21 hm5C_associated_SNPs_47903 0 0 1 U2AF2 POSTAR2 ENCODE chr17:42266695-42266757
64251 chrX 152915772 152915772 1 + C T rs570349306 152915772 + 152915752 152915792 41 CCCACCTAGGGCCCCGTGGCCGGCAGGCCGGCCCCTGCCCC CCCACCTAGGGCCCCGTGGCTGGCAGGCCGGCCCCTGCCCC Direct Loss 0.965812029498178 0 0.90377617 0.6514671 prediction 0.931624058996356 Functional Loss - DUSP9 ENSG00000130829 UTR3 Human protein_coding chrX:152915772 chrX:152915772 . . 0 21 hm5C_associated_SNPs_47907 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:152915767-152915815
64251 chr9 91616635 91616635 1 + C T BRCA 91616635 + 91616615 91616655 41 CGCTGGGCGCCCTGCCCATTCTGGGCTGGAACTGCCTGCAC CGCTGGGCGCCCTGCCCATTTTGGGCTGGAACTGCCTGCAC Direct Loss 0.965805967095842 0 0.77873516 0.712358 prediction 0.931611934191683 Functional Loss - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616635 chr9:91616635 synonymous SNV . 0 21 hm5C_associated_SNPs_47909 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:91616616-91616642
64251 chr10 134016186 134016186 1 + C T CESC 134016186 + 134016166 134016206 41 TCTTCGAGGGAGTGGAGTGCCGGGGAGCGCCTGCCGTGGTC TCTTCGAGGGAGTGGAGTGCTGGGGAGCGCCTGCCGTGGTC Direct Loss 0.965764918091182 0 0.8753948 0.8060861 prediction 0.931529836182364 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134016186 chr10:134016186 nonsynonymous SNV 0.934 3 21 hm5C_associated_SNPs_47912 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:134016182-134016203
64251 chr6 52268150 52268150 1 + C A STAD 52268150 + 52268130 52268170 41 CGGATGTGCCCCAGCTCTTCCGGGAGCCTTACATCCGCACC CGGATGTGCCCCAGCTCTTCAGGGAGCCTTACATCCGCACC Direct Loss 0.965730434456658 0 0.93154156 0.92409956 prediction 0.931460868913316 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268150 chr6:52268150 synonymous SNV . 0 21 hm5C_associated_SNPs_47918 0 0 4 DDX3X POSTAR2 ENCODE chr6:52268140-52268185
64251 chr4 56225636 56225636 1 + C T UCEC 56225636 + 56225616 56225656 41 CATGGTTTGCTCAGAATTCTCGGGGCGGCACAGTTCCAGGG CATGGTTTGCTCAGAATTCTTGGGGCGGCACAGTTCCAGGG Direct Loss 0.965685001985404 0 0.95766675 0.93032503 prediction 0.931370003970808 Functional Loss - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56225636 chr4:56225636 synonymous SNV . 0 21 hm5C_associated_SNPs_47923 0 0 1 SND1 POSTAR2 ENCODE chr4:56225569-56225656
64251 chr1 117618146 117618146 1 + C G ACC 117618146 + 117618126 117618166 41 GCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCAC GCCTGCCTCAGGGGCATTTCGAAGAGCGGCCGGAGACCCAC Direct Loss 0.965683421427975 0 0.9349298 0.9255645 prediction 0.93136684285595 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618146 chr1:117618146 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_47924 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:117618122-117618166
64251 chr19 49378882 49378882 1 + C T UCEC 49378882 + 49378862 49378902 41 TGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATTT TGCCCGCAGGTGCGCTTCTCTGAGAAGGTCACTGTCCATTT Direct Loss 0.965645598564806 0 0.84391236 0.47305885 prediction 0.931291197129613 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49378882 chr19:49378882 synonymous SNV . 0 21 hm5C_associated_SNPs_47925 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr19:49378880-49378900
64251 chr12 69652480 69652480 1 + C A GBM 69652480 + 69652460 69652500 41 CTCTAGCTGGGCCTCCTAATCGAGGAGATCGCCCTCCACCA CTCTAGCTGGGCCTCCTAATAGAGGAGATCGCCCTCCACCA Direct Loss 0.965636610738544 0 0.93917674 0.8738448 prediction 0.931273221477088 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652480 chr12:69652480 synonymous SNV . 0 21 hm5C_associated_SNPs_47926 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:69652362-69652559
64251 chr17 7479901 7479901 1 + C A rs550885428 7479901 + 7479881 7479921 41 GCCTCCTGTCACGCCTGTATCGGGGGCACCAACGTGCGTGC GCCTCCTGTCACGCCTGTATAGGGGGCACCAACGTGCGTGC Direct Loss 0.965519518154885 0 0.9779754 0.9391806 prediction 0.931039036309771 Functional Loss - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479901 chr17:7479901 synonymous SNV . 0 21 hm5C_associated_SNPs_47933 0 0 44 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7479857-7479907
64251 chr8 141521631 141521631 1 + C A HNSC 141521631 + 141521611 141521651 41 GTCGTGGGTAAAGACAAGGGCGGGGAGCAGCGGCTCATCTC GTCGTGGGTAAAGACAAGGGAGGGGAGCAGCGGCTCATCTC Direct Loss 0.965518859538723 0 0.89414346 0.890749 prediction 0.931037719077446 Functional Loss - CHRAC1 ENSG00000104472 CDS Human protein_coding chr8:141521631 chr8:141521631 synonymous SNV . 0 21 hm5C_associated_SNPs_47934 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:141521625-141521660
64251 chr7 44796724 44796724 1 + C T SKCM 44796724 + 44796704 44796744 41 GTACAGCCGCGGGGGCTACCCTGGGGCCCCCGGCTTCACCA GTACAGCCGCGGGGGCTACCTTGGGGCCCCCGGCTTCACCA Direct Loss 0.965491663775921 0 0.93932307 0.9383924 prediction 0.930983327551843 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44796724 chr7:44796724 nonsynonymous SNV 0.942 4 21 hm5C_associated_SNPs_47936 0 0 1 PPIG POSTAR2 ENCODE chr7:44796683-44796727
64251 chr1 156594421 156594421 1 + C T STAD 156594421 + 156594401 156594441 41 GAGGGTCTGGACTGGTGTAACGCGGGCTGGCTGCTCGAGGG GAGGGTCTGGACTGGTGTAATGCGGGCTGGCTGCTCGAGGG Direct Loss 0.965472845137854 0 0.9193157 0.89237154 prediction 0.930945690275708 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594421 chr1:156594421 synonymous SNV . 0 21 hm5C_associated_SNPs_47937 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr12 98909870 98909870 1 - G A rs59027673 98909870 - 98909850 98909890 41 GCGGCCCCAGAGCCGAGGACCGGGGTGGGCTCGCGCTCTTC GCGGCCCCAGAGCCGAGGACTGGGGTGGGCTCGCGCTCTTC Direct Loss 0.965462399393607 0 0.9417124 0.92550737 prediction 0.930924798787214 Functional Loss - TMPO ENSG00000120802 CDS Human protein_coding chr12:98909870 chr12:98909870 synonymous SNV . 0 21 hm5C_associated_SNPs_47939 2 0 1 DDX3X POSTAR2 ENCODE chr12:98909857-98909916
64251 chr1 6694574 6694574 1 - G A rs6804 6694574 - 6694554 6694594 41 GGTGGCTGAGACAGCTGGCGCGGGGGGCCCCAAGCTGCGCC GGTGGCTGAGACAGCTGGCGTGGGGGGCCCCAAGCTGCGCC Direct Loss 0.965452357523543 0 0.93604076 0.9213133 prediction 0.930904715047085 Functional Loss - DNAJC11;THAP3 ENSG00000007923;ENSG00000041988 UTR3 Human other chr1:6694574 chr1:6694574 . . 0 21 hm5C_associated_SNPs_47940 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:6694563-6694584
64251 chr3 3168667 3168667 1 + C T rs541567431 3168667 + 3168647 3168687 41 GGTGGCGGCTGCGGCAACAGCGGGGCCGGTAAGCGGGCGCG GGTGGCGGCTGCGGCAACAGTGGGGCCGGTAAGCGGGCGCG Direct Loss 0.965414090733148 0 0.9103639 0.88480216 prediction 0.930828181466296 Functional Loss - TRNT1 ENSG00000072756 UTR5 Human protein_coding chr3:3168667 chr3:3168667 . . 0 21 hm5C_associated_SNPs_47945 0 0 1 TBRG4 POSTAR2 ENCODE chr3:3168663-3168675
64251 chr3 5229442 5229442 1 + C A COAD 5229442 + 5229422 5229462 41 GCGCGGGGTGCGGTGGTCGGCGGGGAGGCCCCCGCGCTTTA GCGCGGGGTGCGGTGGTCGGAGGGGAGGCCCCCGCGCTTTA Direct Loss 0.96539736601891 0 0.91229284 0.91247696 prediction 0.930794732037819 Functional Loss - EDEM1 ENSG00000268509 CDS Human antisense chr3:5229442 chr3:5229442 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_47947 0 0 6 DDX3X POSTAR2 ENCODE chr3:5229407-5229471
64251 chr7 92158209 92158209 1 + C T BLCA 92158209 + 92158189 92158229 41 GCGACACACGGGCCAAATATCGAGAGGGACGACGGCCTCGT GCGACACACGGGCCAAATATTGAGAGGGACGACGGCCTCGT Direct Loss 0.965393103869212 0 0.9360253 0.916062 prediction 0.930786207738425 Functional Loss - RBM48 ENSG00000127993 CDS Human protein_coding chr7:92158209 chr7:92158209 stopgain 0.913 1 21 hm5C_associated_SNPs_47948 0 0 3 DDX3X POSTAR2 GSE59096,GSM1427359 chr7:92158200-92158220
64251 chr7 150069137 150069137 1 + C T UCEC 150069137 + 150069117 150069157 41 CCCCACCAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAA CCCCACCAGTGCCCCGAGTGTGGGAAGCGCTTTACCAATAA Direct Loss 0.965313593366052 0 0.904675 0.73420775 prediction 0.930627186732104 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069137 chr7:150069137 synonymous SNV . 0 21 hm5C_associated_SNPs_47954 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150069080-150069140
64251 chr3 186302231 186302231 1 + C T UCEC 186302231 + 186302211 186302251 41 TTTTCTAGGTACATATTTCCCGGGATAAGATCACCAGGCCA TTTTCTAGGTACATATTTCCTGGGATAAGATCACCAGGCCA Direct Loss 0.965292701640617 0 0.8826175 0.7994057 prediction 0.930585403281234 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302231 chr3:186302231 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_47957 0 0 9 LIN28A POSTAR2 GSE39873,GSM980593 chr3:186302220-186302240
64251 chr22 50632869 50632869 1 + C T rs4838813 50632869 + 50632849 50632889 41 ACCCAGTTGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGT ACCCAGTTGGTGGCTGAGGATGGGAGCAGGGTGTACGTGGT Direct Loss 0.965256196996907 0 0.90731406 0.86895144 prediction 0.930512393993815 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50632869 chr22:50632869 synonymous SNV . 0 21 hm5C_associated_SNPs_47960 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr22:50632854-50632879
64251 chr11 47600859 47600859 1 + C T THYM 47600859 + 47600839 47600879 41 TTCTGTTGCTGCCGGTGAGGCGGGAGAGCGCCGGGGCCGAC TTCTGTTGCTGCCGGTGAGGTGGGAGAGCGCCGGGGCCGAC Direct Loss 0.965233818176743 0 0.91577643 0.90523463 prediction 0.930467636353487 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600859 chr11:47600859 nonsynonymous SNV 0.824 1 21 hm5C_associated_SNPs_47963 0 0 11 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr12 125576036 125576036 1 + C G LUAD 125576036 + 125576016 125576056 41 GCGGCAAGCATTGGTGCCATCTGGAGCTCCACGTCCCCGGA GCGGCAAGCATTGGTGCCATGTGGAGCTCCACGTCCCCGGA Direct Loss 0.965221383209155 0 0.9018222 0.87209415 prediction 0.93044276641831 Functional Loss - AACS ENSG00000081760 CDS Human protein_coding chr12:125576036 chr12:125576036 nonsynonymous SNV 0.957 3 21 hm5C_associated_SNPs_47964 0 0 5 BUD13 POSTAR2 ENCODE chr12:125576023-125576147
64251 chr2 181845428 181845428 1 + C G rs191441558 181845428 + 181845408 181845448 41 CCGCGTCCCCTCCGCCTCGCCGGGAGCTCGCGCCCTCGCCC CCGCGTCCCCTCCGCCTCGCGGGGAGCTCGCGCCCTCGCCC Direct Loss 0.965213912231209 0 0.92377114 0.9336984 prediction 0.930427824462418 Functional Loss - UBE2E3 ENSG00000170035 UTR5 Human protein_coding chr2:181845428 chr2:181845428 . . 0 21 hm5C_associated_SNPs_47966 0 0 4 DDX3X POSTAR2 ENCODE chr2:181845405-181845452
64251 chr3 183858428 183858428 1 + C T LUSC 183858428 + 183858408 183858448 41 GCCTGGGCCATGGCAGCATCCTAGAGGAAAATGTGCTCCTG GCCTGGGCCATGGCAGCATCTTAGAGGAAAATGTGCTCCTG Direct Loss 0.965146023566752 0 0.49987882 0.6313844 prediction 0.930292047133504 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858428 chr3:183858428 synonymous SNV . 0 21 hm5C_associated_SNPs_47970 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:183858427-183858428
64251 chr1 219347257 219347257 1 + C T SKCM 219347257 + 219347237 219347277 41 CGGCTGCGTCGGGGTCGGTTCTGCAGCGCTGTATCGTGTCG CGGCTGCGTCGGGGTCGGTTTTGCAGCGCTGTATCGTGTCG Direct Loss 0.965043890439235 0 0.7265045 0.630825 prediction 0.93008778087847 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219347257 chr1:219347257 synonymous SNV . 0 21 hm5C_associated_SNPs_47977 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:219347250-219347272
64251 chr11 60689590 60689590 1 + C T CESC 60689590 + 60689570 60689610 41 AGGTGGAGGAGCTGCGCTGGCGCCAGAGGCGAGCGGCCAAG AGGTGGAGGAGCTGCGCTGGTGCCAGAGGCGAGCGGCCAAG Direct Loss 0.965035451054698 0 0.5256658 0.47233084 prediction 0.930070902109396 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689590 chr11:60689590 nonsynonymous SNV 0.996 3 21 hm5C_associated_SNPs_47979 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:60689563-60689595
64251 chr8 37963254 37963254 1 + C A STAD 37963254 + 37963234 37963274 41 AGTTCCGGGGAGGCTGAAGGCGGGTAAGAGGTCCTGCCGCC AGTTCCGGGGAGGCTGAAGGAGGGTAAGAGGTCCTGCCGCC Direct Loss 0.965013261020719 0 0.89299864 0.89993083 prediction 0.930026522041438 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37963254 chr8:37963254 synonymous SNV . 0 21 hm5C_associated_SNPs_47981 0 0 1 DDX24 POSTAR2 ENCODE chr8:37963239-37963257
64251 chr14 105958539 105958539 1 + C T COAD 105958539 + 105958519 105958559 41 AGGATGGCTCGCAGGGCAGTCGGGAGCTGCTGCTGGCTCTG AGGATGGCTCGCAGGGCAGTTGGGAGCTGCTGCTGGCTCTG Direct Loss 0.965011010477307 0 0.8941003 0.8572953 prediction 0.930022020954615 Functional Loss - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958539 chr14:105958539 nonsynonymous SNV 0.841 4 21 hm5C_associated_SNPs_47982 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:105958530-105958546
64251 chr11 65088649 65088649 1 + C T PAAD 65088649 + 65088629 65088669 41 GCACCGCCACCGTGTGTGGGCGGGAGCTCCCGGACGGCCCA GCACCGCCACCGTGTGTGGGTGGGAGCTCCCGGACGGCCCA Direct Loss 0.965002892417388 0 0.91769785 0.48640686 prediction 0.930005784834776 Functional Loss - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088649 chr11:65088649 nonsynonymous SNV 0.987 1 21 hm5C_associated_SNPs_47983 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:65088640-65088660
64251 chr16 2011826 2011826 1 + C A COAD 2011826 + 2011806 2011846 41 CTGGGGGCCTACAGTTCTGCCAGGAAGTGCCTGGCCAAACA CTGGGGGCCTACAGTTCTGCAAGGAAGTGCCTGGCCAAACA Direct Loss 0.964990044939402 0 0.7042792 0.40857452 prediction 0.929980089878804 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011826 chr16:2011826 nonsynonymous SNV 0.890 1 21 hm5C_associated_SNPs_47984 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2011721-2011866
64251 chr3 120499981 120499981 1 + C T rs115958474 120499981 + 120499961 120500001 41 ATGCGAGCACTGCTCATTCACGAGAAAAAGACTTCCTCTGC ATGCGAGCACTGCTCATTCATGAGAAAAAGACTTCCTCTGC Direct Loss 0.964976652227801 0 0.8958101 0.73401606 prediction 0.929953304455601 Functional Loss - GTF2E1 ENSG00000153767 CDS Human protein_coding chr3:120499981 chr3:120499981 synonymous SNV . 0 21 hm5C_associated_SNPs_47985 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:120499953-120499982
64251 chrX 30236752 30236752 1 + C T UCS 30236752 + 30236732 30236772 41 GTGAGAAACGCCGCAAGGCCCGAGATGAGACCCGGGGTCTC GTGAGAAACGCCGCAAGGCCTGAGATGAGACCCGGGGTCTC Direct Loss 0.964912420243159 0 0.5911511 0.3697134 prediction 0.929824840486317 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236752 chrX:30236752 stopgain 0.001 0 21 hm5C_associated_SNPs_47989 0 0 2 DDX3X POSTAR2 ENCODE chrX:30236692-30236760
64251 chr8 91013751 91013751 1 + C T BLCA 91013751 + 91013731 91013771 41 CGGCCAGGGTTTTCTTTACTCTGGGGTCCCGGCTGCCCTGT CGGCCAGGGTTTTCTTTACTTTGGGGTCCCGGCTGCCCTGT Direct Loss 0.964907680036095 0 0.8448915 0.65339994 prediction 0.92981536007219 Functional Loss - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91013751 chr8:91013751 synonymous SNV . 0 21 hm5C_associated_SNPs_47991 0 0 5 DDX3X POSTAR2 ENCODE chr8:91013743-91013789
64251 chr8 145534897 145534897 1 + C T GBM 145534897 + 145534877 145534917 41 GGCGGGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAA GGCGGGAGGTGGCCAGCCTTTGGCAGAAGCATGCCCAGCAA Direct Loss 0.964906967577747 0 0.900554 0.7626543 prediction 0.929813935155494 Functional Loss - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145534897 chr8:145534897 nonsynonymous SNV 0.980 2 21 hm5C_associated_SNPs_47992 0 0 8 BUD13 POSTAR2 ENCODE chr8:145534834-145534921
64251 chr18 670782 670782 1 + C A LUAD 670782 + 670762 670802 41 CTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTCGGTG CTGCCAGCTGTACCAGAGATAGGGAGACATGGGCCTCGGTG Direct Loss 0.964820857456718 0 0.9552013 0.920949 prediction 0.929641714913437 Functional Loss - TYMS ENSG00000176890 CDS Human protein_coding chr18:670782 chr18:670782 stopgain 0.988 1 21 hm5C_associated_SNPs_47998 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:670779-670804
64251 chr15 63335907 63335907 1 + C G rs201720832 63335907 + 63335887 63335927 41 GCCCGCCGCTGCCCCCAGCTCGAGGAGGACATCGCGGCCAA GCCCGCCGCTGCCCCCAGCTGGAGGAGGACATCGCGGCCAA Direct Loss 0.96478626476062 0 0.9311687 0.912313 prediction 0.92957252952124 Functional Loss - TPM1 ENSG00000140416 CDS Human protein_coding chr15:63335907 chr15:63335907 synonymous SNV . 0 21 hm5C_associated_SNPs_47999 1 0 1 SRSF1 POSTAR2 ENCODE chr15:63335895-63336053
64251 chr19 44339668 44339668 1 + C A LGG 44339668 + 44339648 44339688 41 CCTCCCCAGTTCTGGCTTTTCTGGATTCTGTGCTTCACCAA CCTCCCCAGTTCTGGCTTTTATGGATTCTGTGCTTCACCAA Direct Loss 0.96475068952175 0 0.47196302 0.29821718 prediction 0.929501379043501 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44339668 chr19:44339668 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_48005 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44339666-44339744
64251 chr19 49671280 49671280 1 + C T rs201410152 49671280 + 49671260 49671300 41 GGTGTCAGTGCTGGGGGGATCGGGGGGCCCCGTCCTCCAGA GGTGTCAGTGCTGGGGGGATTGGGGGGCCCCGTCCTCCAGA Direct Loss 0.964736420364399 0 0.97050846 0.95429003 prediction 0.929472840728798 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671280 chr19:49671280 nonsynonymous SNV 0.693 2 21 hm5C_associated_SNPs_48006 0 0 1 DDX24 POSTAR2 ENCODE chr19:49671211-49671347
64251 chr18 29099859 29099859 1 + C T OV 29099859 + 29099839 29099879 41 TCACCGCCCCCGTGGCTCTTCGGGAGGGAGAGGATCTGTCC TCACCGCCCCCGTGGCTCTTTGGGAGGGAGAGGATCTGTCC Direct Loss 0.964688456240517 0 0.90064585 0.894221 prediction 0.929376912481034 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29099859 chr18:29099859 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_48009 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr18:29099811-29099860
64251 chr1 156028163 156028163 1 + C T COAD 156028163 + 156028143 156028183 41 CCCAAGTGGCGGCATCTTAACGGCATTGGTGGAAGCTGGGG CCCAAGTGGCGGCATCTTAATGGCATTGGTGGAAGCTGGGG Direct Loss 0.964685293162286 0 0.5891903 0.22342306 prediction 0.929370586324572 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156028163 chr1:156028163 nonsynonymous SNV 0.046 1 21 hm5C_associated_SNPs_48011 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156028124-156028187
64251 chr1 36788238 36788238 1 + C A rs542369630 36788238 + 36788218 36788258 41 GGCCGCGGGCGGGGCGCCCACGAGATGCTGATGACGAGCAG GGCCGCGGGCGGGGCGCCCAAGAGATGCTGATGACGAGCAG Direct Loss 0.964679441973519 0 0.8900056 0.9109082 prediction 0.929358883947038 Functional Loss - EVA1B ENSG00000142694 CDS Human protein_coding chr1:36788238 chr1:36788238 synonymous SNV . 0 21 hm5C_associated_SNPs_48012 0 0 5 EWSR1 POSTAR2 ENCODE chr1:36788180-36788251
64251 chr12 54676893 54676893 1 + C G LIHC 54676893 + 54676873 54676913 41 AGGAGGCGGCCCTGGTTACTCTGGAGGAAGCAGAGGCTATG AGGAGGCGGCCCTGGTTACTGTGGAGGAAGCAGAGGCTATG Direct Loss 0.964665361662888 0 0.5360369 0.4641318 prediction 0.929330723325775 Functional Loss - HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54676893 chr12:54676893 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_48014 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:54676859-54676904
64251 chrX 46434198 46434198 1 + C T CESC 46434198 + 46434178 46434218 41 TGAAGGTGGTGCAGCTTTTCCGCGACCCGAGGGCGGTGCAC TGAAGGTGGTGCAGCTTTTCTGCGACCCGAGGGCGGTGCAC Direct Loss 0.964642678084707 0 0.8697576 0.4307171 prediction 0.929285356169415 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46434198 chrX:46434198 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_48017 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chrX:46434191-46434215
64251 chr19 6739716 6739716 1 + C G rs564768719 6739716 + 6739696 6739736 41 TCCCCGGGGAGGGCGGCGGGCGGCGGGCGGCGGGGACCGGG TCCCCGGGGAGGGCGGCGGGGGGCGGGCGGCGGGGACCGGG Direct Loss 0.964624501262189 0 0.90066236 0.9099143 prediction 0.929249002524378 Functional Loss - TRIP10 ENSG00000125733 UTR5 Human protein_coding chr19:6739716 chr19:6739716 . . 0 21 hm5C_associated_SNPs_48019 0 0 9 DDX55 POSTAR2 ENCODE chr19:6739709-6739766
64251 chr3 32933231 32933231 1 + C T BLCA 32933231 + 32933211 32933251 41 GGGCAGATGGACCGCCCTTCCGGCATCGCCATCACCCCCGA GGGCAGATGGACCGCCCTTCTGGCATCGCCATCACCCCCGA Direct Loss 0.964611645469662 0 0.7894708 0.4116512 prediction 0.929223290939325 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32933231 chr3:32933231 synonymous SNV . 0 21 hm5C_associated_SNPs_48020 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32933208-32933258
64251 chr2 127454072 127454072 1 + C T rs564342506 127454072 + 127454052 127454092 41 TGAGGGGGTGCTGGGGTACCCGGGGGCTGGGGAAGCAAGGA TGAGGGGGTGCTGGGGTACCTGGGGGCTGGGGAAGCAAGGA Direct Loss 0.96457431077784 0 0.91071284 0.9005397 prediction 0.92914862155568 Functional Loss - GYPC ENSG00000136732 UTR3 Human protein_coding chr2:127454072 chr2:127454072 . . 0 21 hm5C_associated_SNPs_48023 0 0 5 DDX6 POSTAR2 ENCODE chr2:127454060-127454177
64251 chrX 47038780 47038780 1 + C T STAD 47038780 + 47038760 47038800 41 AGACACTGCCACTGGGTGGCCGGGAGCTGAGCCAGGGCCTG AGACACTGCCACTGGGTGGCTGGGAGCTGAGCCAGGGCCTG Direct Loss 0.964568564927663 0 0.90946305 0.84256065 prediction 0.929137129855327 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47038780 chrX:47038780 nonsynonymous SNV 0.989 2 21 hm5C_associated_SNPs_48024 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47038758-47038812
64251 chr19 17417054 17417054 1 + C A BLCA 17417054 + 17417034 17417074 41 AGCAGGCCCGGGGCAAGGCTCGCGGGAATGAGTATCAGCCG AGCAGGCCCGGGGCAAGGCTAGCGGGAATGAGTATCAGCCG Direct Loss 0.964564350870275 0 0.90752083 0.3666594 prediction 0.929128701740549 Functional Loss - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417054 chr19:17417054 nonsynonymous SNV 0.350 4 21 hm5C_associated_SNPs_48026 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17417009-17417062
64251 chr1 209849324 209849324 1 + C T HNSC 209849324 + 209849304 209849344 41 GCGGCCGGGCCCTGTCCAACCGGCAGCACGCCTCCTAGGAA GCGGCCGGGCCCTGTCCAACTGGCAGCACGCCTCCTAGGAA Direct Loss 0.96455053949756 0 0.6476032 0.44443592 prediction 0.92910107899512 Functional Loss - G0S2 ENSG00000123689 CDS Human protein_coding chr1:209849324 chr1:209849324 nonsynonymous SNV 0.103 3 21 hm5C_associated_SNPs_48027 0 0 1 SND1 POSTAR2 ENCODE chr1:209849282-209849329
64251 chr19 45912960 45912960 1 + C G LUAD 45912960 + 45912940 45912980 41 ACTTTCAAGAAGGGCTCGTGCAGGACATCAAACAGCCTCCG ACTTTCAAGAAGGGCTCGTGGAGGACATCAAACAGCCTCCG Direct Loss 0.964536268307899 0 0.47409666 0.3571748 prediction 0.929072536615797 Functional Loss - ERCC1 ENSG00000012061 CDS Human protein_coding chr19:45912960 chr19:45912960 nonsynonymous SNV 0.786 0 21 hm5C_associated_SNPs_48029 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:45912921-45912964
64251 chr16 56839443 56839443 1 + C T UCEC 56839443 + 56839423 56839463 41 GCATGGCTGAGGAGTACCATCGGGAGTCAATGTTGGTTGAG GCATGGCTGAGGAGTACCATTGGGAGTCAATGTTGGTTGAG Direct Loss 0.964534062443646 0 0.9134739 0.8890003 prediction 0.929068124887293 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56839443 chr16:56839443 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_48030 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:56839431-56839454
64251 chr19 17452077 17452077 1 + C T UCEC 17452077 + 17452057 17452097 41 CCTGCTGCTGTCCTGTCTGACGGGAGAGGGGCTGGACGGCC CCTGCTGCTGTCCTGTCTGATGGGAGAGGGGCTGGACGGCC Direct Loss 0.96453061776216 0 0.9210428 0.8999716 prediction 0.92906123552432 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452077 chr19:17452077 nonsynonymous SNV 0.006 4 21 hm5C_associated_SNPs_48031 0 0 1 PPIG POSTAR2 ENCODE chr19:17452038-17452131
64251 chrX 153666940 153666940 1 + C T STAD 153666940 + 153666920 153666960 41 ATGGACCGGAACCCCTACTACGGGGGCGAGAGCTCCTCCAT ATGGACCGGAACCCCTACTATGGGGGCGAGAGCTCCTCCAT Direct Loss 0.964504745330332 0 0.9348258 0.9153229 prediction 0.929009490660665 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153666940 chrX:153666940 synonymous SNV . 0 21 hm5C_associated_SNPs_48032 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:153666916-153666941
64251 chr19 6751236 6751236 1 + C T rs202066006 6751236 + 6751216 6751256 41 CAATTGAACCCTGCCAGAGACGGGAAGAGGGGGGCTGTCGG CAATTGAACCCTGCCAGAGATGGGAAGAGGGGGGCTGTCGG Direct Loss 0.964448915590025 0 0.91455626 0.89839536 prediction 0.928897831180049 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751236 chr19:6751236 nonsynonymous SNV 0.019 0 21 hm5C_associated_SNPs_48039 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:6751234-6751255
64251 chr19 35758446 35758446 1 + C T LUSC 35758446 + 35758426 35758466 41 ACCACCGTACCCGGGACCCTCGGGACAACGGCTCCAGGTCC ACCACCGTACCCGGGACCCTTGGGACAACGGCTCCAGGTCC Direct Loss 0.964418447378243 0 0.91661465 0.8284623 prediction 0.928836894756486 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35758446 chr19:35758446 nonsynonymous SNV 0.392 3 21 hm5C_associated_SNPs_48040 0 0 4 RPS3 POSTAR2 ENCODE chr19:35758410-35758470
64251 chr3 122103141 122103141 1 + C T rs140995238 122103141 + 122103121 122103161 41 CCTCAGCGGTCTGCGCCTGGCAGCAGGTGAGACGCCGGTCG CCTCAGCGGTCTGCGCCTGGTAGCAGGTGAGACGCCGGTCG Direct Loss 0.964395601646905 0 0.82964826 0.7390218 prediction 0.92879120329381 Functional Loss - FAM162A ENSG00000114023 CDS Human protein_coding chr3:122103141 chr3:122103141 nonsynonymous SNV 0.014 0 21 hm5C_associated_SNPs_48042 0 0 8 DDX3X POSTAR2 ENCODE chr3:122103070-122103149
64251 chr17 38318390 38318390 1 + C T STAD 38318390 + 38318370 38318410 41 ATGATCTTCGAGGGCAAACTCAGGAGGAGGAAGTCAGGTAA ATGATCTTCGAGGGCAAACTTAGGAGGAGGAAGTCAGGTAA Direct Loss 0.964348372456133 0 0.91682875 0.9033669 prediction 0.928696744912265 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318390 chr17:38318390 stopgain 1.000 1 21 hm5C_associated_SNPs_48045 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38318264-38318395
64251 chr1 228334618 228334618 1 + C T GBM 228334618 + 228334598 228334638 41 CATCGAGCATGCCGAGTTCTCGGGGAACCTGTATGGCACGA CATCGAGCATGCCGAGTTCTTGGGGAACCTGTATGGCACGA Direct Loss 0.964340224317347 0 0.9469098 0.91368175 prediction 0.928680448634695 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228334618 chr1:228334618 nonsynonymous SNV 0.780 3 21 hm5C_associated_SNPs_48046 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228334599-228334622
64251 chr12 58015609 58015609 1 + C A OV 58015609 + 58015589 58015629 41 CCGGCTACCCACGCCGATCCCGGGGGAAGTCGTCTTGGTGA CCGGCTACCCACGCCGATCCAGGGGGAAGTCGTCTTGGTGA Direct Loss 0.964335552316864 0 0.942259 0.9110259 prediction 0.928671104633727 Functional Loss - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58015609 chr12:58015609 nonsynonymous SNV 0.476 4 21 hm5C_associated_SNPs_48048 0 0 2 PRPF8 POSTAR2 ENCODE chr12:58015578-58015654
64251 chr2 10282461 10282461 1 + C T UCEC 10282461 + 10282441 10282481 41 TCTGCGTGTCAGGTGTTACTCGGGGTGCGCCAGTGGAAGCG TCTGCGTGTCAGGTGTTACTTGGGGTGCGCCAGTGGAAGCG Direct Loss 0.964311191076013 0 0.9469559 0.9204936 prediction 0.928622382152027 Functional Loss - C2orf48 ENSG00000163009 CDS Human lincRNA chr2:10282461 chr2:10282461 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_48054 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:10282440-10282468
64251 chr5 140019433 140019433 1 + C A rs558148339 140019433 + 140019413 140019453 41 GCTGCGATCCTCGGGGAAACCGAGGTGAGGGGGCAAGGTAG GCTGCGATCCTCGGGGAAACAGAGGTGAGGGGGCAAGGTAG Direct Loss 0.964220610597229 0 0.91104186 0.9027761 prediction 0.928441221194457 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140019433 chr5:140019433 synonymous SNV . 0 21 hm5C_associated_SNPs_48058 0 0 7 EFTUD2 POSTAR2 ENCODE chr5:140019416-140019533
64251 chr16 67916623 67916623 1 + C T COAD 67916623 + 67916603 67916643 41 ACATGAAGAGCCGGAAGGCACGGGAACAGGAGGCCAGGGAG ACATGAAGAGCCGGAAGGCATGGGAACAGGAGGCCAGGGAG Direct Loss 0.964207532268031 0 0.89348125 0.81460357 prediction 0.928415064536062 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67916623 chr16:67916623 nonsynonymous SNV 0.961 3 21 hm5C_associated_SNPs_48060 0 0 7 DDX24 POSTAR2 ENCODE chr16:67916578-67916623
64251 chrX 56590349 56590349 1 + C T UCEC 56590349 + 56590329 56590369 41 GCGGCCCCCCGCGCCCCTCCCGCGGCCCTGCTGCGGCCCAA GCGGCCCCCCGCGCCCCTCCTGCGGCCCTGCTGCGGCCCAA Direct Loss 0.964190773063116 0 0.89382243 0.59242535 prediction 0.928381546126232 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590349 chrX:56590349 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_48061 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chrX:56590341-56590382
64251 chr6 26463541 26463541 1 + C G BRCA 26463541 + 26463521 26463561 41 CATCCGGCTGGAGTGCATATCTAGAGGGTGGTACCCAAAGC CATCCGGCTGGAGTGCATATGTAGAGGGTGGTACCCAAAGC Direct Loss 0.964190408529441 0 0.4486128 0.45199186 prediction 0.928380817058882 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463541 chr6:26463541 nonsynonymous SNV 0.379 5 21 hm5C_associated_SNPs_48062 0 0 3 BUD13 POSTAR2 ENCODE chr6:26463457-26463542
64251 chr19 17450401 17450401 1 + C T BRCA 17450401 + 17450381 17450421 41 AGGAGGGCGTGCGGCGCGCCCGGGAGAGGTGGGCGGACAGG AGGAGGGCGTGCGGCGCGCCTGGGAGAGGTGGGCGGACAGG Direct Loss 0.964128375539475 0 0.90899897 0.8734665 prediction 0.928256751078949 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450401 chr19:17450401 nonsynonymous SNV 0.047 1 21 hm5C_associated_SNPs_48063 0 0 4 GTF2F1 POSTAR2 ENCODE chr19:17450332-17450449
64251 chr16 30012816 30012816 1 + C T COAD 30012816 + 30012796 30012836 41 CCAGTCCCCTGAGGCCCAAGCGGGAGAAACGGCCCCGCCTG CCAGTCCCCTGAGGCCCAAGTGGGAGAAACGGCCCCGCCTG Direct Loss 0.964063323937881 0 0.9578383 0.93564665 prediction 0.928126647875762 Functional Loss - INO80E ENSG00000169592 CDS Human protein_coding chr16:30012816 chr16:30012816 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_48066 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30012782-30012819
64251 chr16 27459912 27459912 1 - G T GBM 27459912 - 27459892 27459932 41 CTCCAGGGTGGAGGGCACCTCTGGGCTCCAGGGTCCCAGCT CTCCAGGGTGGAGGGCACCTATGGGCTCCAGGGTCCCAGCT Direct Loss 0.963990604653396 0 0.82805765 0.5801203 prediction 0.927981209306792 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27459912 chr16:27459912 stopgain 0.001 0 21 hm5C_associated_SNPs_48072 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:27459909-27459937
64251 chr11 1977613 1977613 1 + C T SKCM 1977613 + 1977593 1977633 41 GCAGAGGCAGAGCAGCGACCCGCGGCGGGGCGGCGTCCCCA GCAGAGGCAGAGCAGCGACCTGCGGCGGGGCGGCGTCCCCA Direct Loss 0.963981649049732 0 0.799291 0.47106898 prediction 0.927963298099465 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1977613 chr11:1977613 nonsynonymous SNV 0.036 0 21 hm5C_associated_SNPs_48074 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:1977600-1977620
64251 chr11 607679 607679 1 + C A UCEC 607679 + 607659 607699 41 AGCAGGGTGCCCCGGGAGCCCGGGGTGCACACGGGCAGCTC AGCAGGGTGCCCCGGGAGCCAGGGGTGCACACGGGCAGCTC Direct Loss 0.963975072772452 0 0.9208334 0.92624557 prediction 0.927950145544903 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607679 chr11:607679 synonymous SNV . 0 21 hm5C_associated_SNPs_48076 0 0 1 EIF3H POSTAR2 ENCODE chr11:607660-607689
64251 chr16 29828032 29828032 1 + C T STAD 29828032 + 29828012 29828052 41 GAGACCGAGCGTGAGGGGTCCGGGGGCGAGGAGGCGCAGGG GAGACCGAGCGTGAGGGGTCTGGGGGCGAGGAGGCGCAGGG Direct Loss 0.963835130776166 0 0.9052937 0.89716125 prediction 0.927670261552333 Functional Loss - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828032 chr16:29828032 synonymous SNV . 0 21 hm5C_associated_SNPs_48082 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29828016-29828054
64251 chr4 78808420 78808420 1 + C T DLBC 78808420 + 78808400 78808440 41 AGAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGATAC AGAAAATGGAGCTGCATTTGTAGGAGGCACTAGTCTGATAC Direct Loss 0.963830370849588 0 0.8764535 0.74069995 prediction 0.927660741699176 Functional Loss - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78808420 chr4:78808420 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_48083 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:78808410-78808432
64251 chr9 133346226 133346226 1 + C T rs10901072 133346226 + 133346206 133346246 41 GTCTCTTTCCTGCAGCAACACGGGATTCCCATCCCGGTCAC GTCTCTTTCCTGCAGCAACATGGGATTCCCATCCCGGTCAC Direct Loss 0.963816161378662 0 0.88999665 0.4636229 prediction 0.927632322757325 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133346226 chr9:133346226 synonymous SNV . 0 21 hm5C_associated_SNPs_48085 2 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:133346220-133346241
64251 chr19 1274244 1274244 1 + C T rs142436314 1274244 + 1274224 1274264 41 GTGGCTGTTTCCGGGGAGGCCGGGAGGGGCAGCTGTGAGCC GTGGCTGTTTCCGGGGAGGCTGGGAGGGGCAGCTGTGAGCC Direct Loss 0.963811360269934 0 0.91886735 0.9071481 prediction 0.927622720539867 Functional Loss - CIRBP ENSG00000099622 UTR3 Human protein_coding chr19:1274244 chr19:1274244 . . 0 21 hm5C_associated_SNPs_48086 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1274112-1274252
64251 chr22 42967270 42967270 1 + C T rs147107302 42967270 + 42967250 42967290 41 ACATGGGCGCCAGGAATCTCCGGGAGGGGGCCCTGGCATGA ACATGGGCGCCAGGAATCTCTGGGAGGGGGCCCTGGCATGA Direct Loss 0.963800025352734 0 0.9186199 0.8792132 prediction 0.927600050705467 Functional Loss - SERHL2 ENSG00000182841 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr22:42967270 chr22:42967270 . . 0 21 hm5C_associated_SNPs_48087 0 0 2 EFTUD2 POSTAR2 ENCODE chr22:42967231-42967285
64251 chr17 4701595 4701595 1 + C T UCEC 4701595 + 4701575 4701615 41 CTCTCGCTTTGGCCATGGAGCGGGATGGCTCCAGTGGAGGA CTCTCGCTTTGGCCATGGAGTGGGATGGCTCCAGTGGAGGA Direct Loss 0.963777676845898 0 0.8924098 0.5317983 prediction 0.927555353691796 Functional Loss - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701595 chr17:4701595 nonsynonymous SNV 0.992 3 21 hm5C_associated_SNPs_48090 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4701580-4701600
64251 chr17 4927255 4927255 1 + C T SKCM 4927255 + 4927235 4927275 41 TGGATGGAGGGGGCCGATCCCGGGGAGCGGGTTCTGCACAG TGGATGGAGGGGGCCGATCCTGGGGAGCGGGTTCTGCACAG Direct Loss 0.963721214698796 0 0.94984996 0.9314029 prediction 0.927442429397592 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4927255 chr17:4927255 nonsynonymous SNV 0.929 2 21 hm5C_associated_SNPs_48092 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:4927226-4927262
64251 chr19 36038288 36038288 1 + C T PRAD 36038288 + 36038268 36038308 41 ACTGGCCCGAGCAGTGGTAACGGGGCTGCTGGCCCTCAGCA ACTGGCCCGAGCAGTGGTAATGGGGCTGCTGGCCCTCAGCA Direct Loss 0.963706837598271 0 0.93211854 0.91059625 prediction 0.927413675196542 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36038288 chr19:36038288 nonsynonymous SNV 0.883 4 21 hm5C_associated_SNPs_48093 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36038250-36038295
64251 chr12 57998636 57998636 1 + C T rs542850386 57998636 + 57998616 57998656 41 ACCGGCAATGGCGGCGCTGACGAGAGGTAGGTGAGCCCGGC ACCGGCAATGGCGGCGCTGATGAGAGGTAGGTGAGCCCGGC Direct Loss 0.963671979390417 0 0.9067304 0.8688042 prediction 0.927343958780835 Functional Loss - DTX3 ENSG00000178498 UTR5 Human protein_coding chr12:57998636 chr12:57998636 . . 0 21 hm5C_associated_SNPs_48095 0 0 1 SUPV3L1 POSTAR2 ENCODE chr12:57998596-57998670
64251 chr10 54074296 54074296 1 + C T UCEC 54074296 + 54074276 54074316 41 GGAGTGAGCGCCACCTTGAACTCGGTTCTCAATTCCAACGC GGAGTGAGCGCCACCTTGAATTCGGTTCTCAATTCCAACGC Direct Loss 0.963651147821434 0 0.16203657 0.13649723 prediction 0.927302295642869 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074296 chr10:54074296 synonymous SNV . 0 21 hm5C_associated_SNPs_48096 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074220-54074340
64251 chr1 36396889 36396889 1 + C T rs540604358 36396889 + 36396869 36396909 41 GCTTTCGGAGTGCGGTTGCTCAGGGGAAGCCGTCGCCGCCC GCTTTCGGAGTGCGGTTGCTTAGGGGAAGCCGTCGCCGCCC Direct Loss 0.963647588514866 0 0.9619298 0.93707573 prediction 0.927295177029732 Functional Loss - AGO3 ENSG00000126070 UTR5 Human protein_coding chr1:36396889 chr1:36396889 . . 0 21 hm5C_associated_SNPs_48097 0 0 3 PPIG POSTAR2 ENCODE chr1:36396876-36396930
64251 chr20 61870912 61870912 1 + C T SKCM 61870912 + 61870892 61870932 41 GGCCTGCAGCTGTGCCCCATCTGCAGAGCCCCCGTCCGCAG GGCCTGCAGCTGTGCCCCATTTGCAGAGCCCCCGTCCGCAG Direct Loss 0.963605420023297 0 0.22128236 0.16454816 prediction 0.927210840046593 Functional Loss - BIRC7 ENSG00000101197 CDS Human protein_coding chr20:61870912 chr20:61870912 synonymous SNV . 0 21 hm5C_associated_SNPs_48100 0 0 1 DDX55 POSTAR2 ENCODE chr20:61870878-61870947
64251 chr3 183887875 183887875 1 + C T COAD 183887875 + 183887855 183887895 41 ACTGGCCCCTTTGCCGCACCCGGGGGCCGCCCCTTGGCCCA ACTGGCCCCTTTGCCGCACCTGGGGGCCGCCCCTTGGCCCA Direct Loss 0.96360153682201 0 0.95906967 0.93752337 prediction 0.92720307364402 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183887875 chr3:183887875 nonsynonymous SNV 0.934 4 21 hm5C_associated_SNPs_48101 0 0 3 IGF2BP2 POSTAR2 ENCODE chr3:183887842-183887980
64251 chr10 102822540 102822540 1 + C T BLCA 102822540 + 102822520 102822560 41 GCCAGAAGAGTGCGCCGCGCCGCGGGGCTGCCTGGCGGGCA GCCAGAAGAGTGCGCCGCGCTGCGGGGCTGCCTGGCGGGCA Direct Loss 0.963598022649974 0 0.8574426 0.45468795 prediction 0.927196045299947 Functional Loss - KAZALD1 ENSG00000107821 CDS Human protein_coding chr10:102822540 chr10:102822540 nonsynonymous SNV 0.977 1 21 hm5C_associated_SNPs_48102 0 0 3 DDX3X POSTAR2 ENCODE chr10:102822485-102822571
64251 chr10 13214675 13214675 1 + C T SKCM 13214675 + 13214655 13214695 41 AGAGGAGAGTTCAGAGAATTCAGGAGTCAACATGCTTTTCT AGAGGAGAGTTCAGAGAATTTAGGAGTCAACATGCTTTTCT Direct Loss 0.963596696464195 0 0.8880956 0.76612175 prediction 0.927193392928389 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13214675 chr10:13214675 stopgain 0.970 0 21 hm5C_associated_SNPs_48103 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:13214650-13214682
64251 chr11 70049728 70049728 1 + C A CESC 70049728 + 70049708 70049748 41 TGCTGCTGGAGCAGAACGACCTGGAGCCCGGGCACACCGAG TGCTGCTGGAGCAGAACGACATGGAGCCCGGGCACACCGAG Direct Loss 0.963594340274216 0 0.19338399 0.09624979 prediction 0.927188680548433 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049728 chr11:70049728 nonsynonymous SNV 0.966 4 21 hm5C_associated_SNPs_48104 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70049708-70049736
64251 chr5 177022271 177022271 1 + C T PRAD 177022271 + 177022251 177022291 41 CTTATATTCCCCTGCAGTGGCGAGAGGAGCGCTTCCGGCAG CTTATATTCCCCTGCAGTGGTGAGAGGAGCGCTTCCGGCAG Direct Loss 0.963577385374666 0 0.86600363 0.8411165 prediction 0.927154770749333 Functional Loss - TMED9 ENSG00000184840 CDS Human protein_coding chr5:177022271 chr5:177022271 stopgain 1.000 1 21 hm5C_associated_SNPs_48107 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:177022267-177022315
64251 chr20 43160617 43160617 1 + C A rs73611738 43160617 + 43160597 43160637 41 ACGGAGAGGCGGCGAGACCGCAGGTGAGCAGGAGCCGGGCG ACGGAGAGGCGGCGAGACCGAAGGTGAGCAGGAGCCGGGCG Direct Loss 0.963557435044371 0 0.86551845 0.80082464 prediction 0.927114870088741 Functional Loss - PKIG ENSG00000168734 UTR5 Human protein_coding chr20:43160617 chr20:43160617 . . 0 21 hm5C_associated_SNPs_48108 0 0 3 BUD13 POSTAR2 ENCODE chr20:43160616-43160675
64251 chr12 132425944 132425944 1 + C G HNSC 132425944 + 132425924 132425964 41 CGCACAAGGACCGGGACGTTCAGGATGAGACCTACCGCCTG CGCACAAGGACCGGGACGTTGAGGATGAGACCTACCGCCTG Direct Loss 0.963554055176671 0 0.9330288 0.9199804 prediction 0.927108110353342 Functional Loss - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132425944 chr12:132425944 nonsynonymous SNV 0.254 0 21 hm5C_associated_SNPs_48109 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:132425905-132425950
64251 chr14 24607692 24607692 1 + C T BLCA 24607692 + 24607672 24607712 41 GCTTCCCACAGGGTGATTATCGGCAGCTGGTGCACGAGCTG GCTTCCCACAGGGTGATTATTGGCAGCTGGTGCACGAGCTG Direct Loss 0.963460889693382 0 0.92055404 0.87689626 prediction 0.926921779386763 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607692 chr14:24607692 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_48115 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24607690-24607722
64251 chr9 132571891 132571891 1 + C G rs78173949 132571891 + 132571871 132571911 41 CCAGATGGGGTAGGAGACAGCTGGGAGGCTCCGCACGCCAG CCAGATGGGGTAGGAGACAGGTGGGAGGCTCCGCACGCCAG Direct Loss 0.963453192761062 0 0.88834083 0.8926387 prediction 0.926906385522124 Functional Loss - TOR1B ENSG00000136816 UTR3 Human protein_coding chr9:132571891 chr9:132571891 . . 0 21 hm5C_associated_SNPs_48116 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:132571874-132571911
64251 chr1 28176693 28176693 1 + C T THCA 28176693 + 28176673 28176713 41 GCCTTCAGCGGAGGACTCTACGGGGGCCTGCCCCCCACACA GCCTTCAGCGGAGGACTCTATGGGGGCCTGCCCCCCACACA Direct Loss 0.963444495618368 0 0.9248425 0.91105455 prediction 0.926888991236735 Functional Loss - PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176693 chr1:28176693 synonymous SNV . 0 21 hm5C_associated_SNPs_48117 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:28176666-28176716
64251 chr19 45515237 45515237 1 + C T COAD 45515237 + 45515217 45515257 41 GAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGGCCCGGG GAGAACGGCTTCGGCCTGGATGGGGGACAGCCGGGCCCGGG Direct Loss 0.963333364266452 0 0.90330786 0.88007015 prediction 0.926666728532903 Functional Loss - RELB ENSG00000104856 CDS Human protein_coding chr19:45515237 chr19:45515237 synonymous SNV . 0 21 hm5C_associated_SNPs_48125 0 0 1 PPIG POSTAR2 ENCODE chr19:45515207-45515270
64251 chr7 100866997 100866997 1 + C T BLCA 100866997 + 100866977 100867017 41 TAACTACCTGACGGCCTGTGCGGGACCCCCATCGCGGCCCC TAACTACCTGACGGCCTGTGTGGGACCCCCATCGCGGCCCC Direct Loss 0.963281330407554 0 0.8811275 0.8002255 prediction 0.926562660815107 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866997 chr7:100866997 nonsynonymous SNV 0.646 1 21 hm5C_associated_SNPs_48127 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr7:100866953-100867006
64251 chr15 49170685 49170685 1 + C A UCEC 49170685 + 49170665 49170705 41 GAGGGCGAGGAATTTGATGACTGGGAGGACGACTACGACTA GAGGGCGAGGAATTTGATGAATGGGAGGACGACTACGACTA Direct Loss 0.963270568409304 0 0.2806232 0.3495093 prediction 0.926541136818607 Functional Loss - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170685 chr15:49170685 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48129 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:49170640-49170716
64251 chr17 37074968 37074968 1 + C T UCEC 37074968 + 37074948 37074988 41 ATCGACGACGGCTGGATGTACGGGACGGTGGAGCGCACCGG ATCGACGACGGCTGGATGTATGGGACGGTGGAGCGCACCGG Direct Loss 0.963257887410904 0 0.6352817 0.43633085 prediction 0.926515774821809 Functional Loss - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37074968 chr17:37074968 synonymous SNV . 0 21 hm5C_associated_SNPs_48132 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:37074965-37074990
64251 chr17 46628473 46628473 1 - G A UCEC 46628473 - 46628453 46628493 41 GGCAGCGGGGGCGGTGGCGGCGGCGGCGGGGGAGGGGACAA GGCAGCGGGGGCGGTGGCGGTGGCGGCGGGGGAGGGGACAA Direct Loss 0.963193185443015 0 0.92899096 0.9166753 prediction 0.926386370886031 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628473 chr17:46628473 synonymous SNV . 0 21 hm5C_associated_SNPs_48136 0 0 3 BUD13 POSTAR2 ENCODE chr17:46628411-46628477
64251 chr19 16296555 16296555 1 + C T CESC 16296555 + 16296535 16296575 41 ACCCCGGCCCAGGCGGCCTTCGAGAAAATGCAGGAGAAGCG ACCCCGGCCCAGGCGGCCTTTGAGAAAATGCAGGAGAAGCG Direct Loss 0.963184810862962 0 0.8249736 0.6003788 prediction 0.926369621725924 Functional Loss - FAM32A ENSG00000105058 CDS Human protein_coding chr19:16296555 chr19:16296555 synonymous SNV . 0 21 hm5C_associated_SNPs_48138 0 0 4 GRWD1 POSTAR2 ENCODE chr19:16296496-16296573
64251 chr2 220100553 220100553 1 + C A rs150402081 220100553 + 220100533 220100573 41 AGGAGCAGGAGGAGCGTGAACGAGAAGAGCAGCGGCGATTT AGGAGCAGGAGGAGCGTGAAAGAGAAGAGCAGCGGCGATTT Direct Loss 0.963180579326849 0 0.8682332 0.6325119 prediction 0.926361158653698 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220100553 chr2:220100553 synonymous SNV . 0 21 hm5C_associated_SNPs_48139 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:220100540-220100560
64251 chr1 149858692 149858692 1 + C G BLCA 149858692 + 149858672 149858712 41 GTCTACATGGCGGCGGTCCTCGAGTACCTGACCGCCGAGAT GTCTACATGGCGGCGGTCCTGGAGTACCTGACCGCCGAGAT Direct Loss 0.963170356427252 0 0.907712 0.9238484 prediction 0.926340712854504 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858692 chr1:149858692 synonymous SNV . 0 21 hm5C_associated_SNPs_48141 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:149858672-149858693
64251 chr7 111846811 111846811 1 + C A LIHC 111846811 + 111846791 111846831 41 AGGGGGCTGTCGCCCGAATGCAGGAAGACCGTGATGGGAGC AGGGGGCTGTCGCCCGAATGAAGGAAGACCGTGATGGGAGC Direct Loss 0.963155490975416 0 0.69206 0.64778763 prediction 0.926310981950832 Functional Loss - ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111846811 chr7:111846811 nonsynonymous SNV 0.009 0 21 hm5C_associated_SNPs_48142 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:111846800-111846838
64251 chr2 136499512 136499512 1 + C T LUSC 136499512 + 136499492 136499532 41 AGGGAGCGATGCTGTGGTTCCAGGGCGCCATTCCGGCCGCC AGGGAGCGATGCTGTGGTTCTAGGGCGCCATTCCGGCCGCC Direct Loss 0.963140312912855 0 0.9151069 0.91033137 prediction 0.926280625825709 Functional Loss - UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136499512 chr2:136499512 stopgain 0.998 0 21 hm5C_associated_SNPs_48143 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr2:136499505-136499526
64251 chr10 73122283 73122283 1 + C T UCEC 73122283 + 73122263 73122303 41 CAGGGAGCTGGCTGAGGCCACGGGAGTGGTGATGTCCTTTT CAGGGAGCTGGCTGAGGCCATGGGAGTGGTGATGTCCTTTT Direct Loss 0.963131261272556 0 0.82356244 0.7735008 prediction 0.926262522545113 Functional Loss - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73122283 chr10:73122283 nonsynonymous SNV 0.670 4 21 hm5C_associated_SNPs_48144 0 0 4 TIA1 POSTAR2 ENCODE chr10:73122259-73122304
64251 chr12 110152337 110152337 1 + C G rs191257919 110152337 + 110152317 110152357 41 GCGCGGGCGGAGAGGGCGCCCTGGGAGCGGCGCGGGCCGAG GCGCGGGCGGAGAGGGCGCCGTGGGAGCGGCGCGGGCCGAG Direct Loss 0.963069042632787 0 0.9052832 0.916093 prediction 0.926138085265574 Functional Loss - FAM222A ENSG00000139438 UTR5 Human protein_coding chr12:110152337 chr12:110152337 . . 0 21 hm5C_associated_SNPs_48148 0 0 2 DDX3X POSTAR2 ENCODE chr12:110152282-110152360
64251 chr17 16335395 16335395 1 + C A CESC 16335395 + 16335375 16335415 41 GAGGGCAACGGGGCCCAGTACAGGGGTATCCTGGAAGCCTC GAGGGCAACGGGGCCCAGTAAAGGGGTATCCTGGAAGCCTC Direct Loss 0.96305763612803 0 0.91717565 0.88568723 prediction 0.926115272256061 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335395 chr17:16335395 stopgain 0.000 1 21 hm5C_associated_SNPs_48149 0 0 1 SND1 POSTAR2 ENCODE chr17:16335328-16335402
64251 chr1 89990533 89990533 1 + C A rs116042160 89990533 + 89990513 89990553 41 CCTGCCCGCCCGGAGCGGCCCAGGAGCACGCCGCGGGGAGC CCTGCCCGCCCGGAGCGGCCAAGGAGCACGCCGCGGGGAGC Direct Loss 0.963043580170405 0 0.9087002 0.8952807 prediction 0.926087160340811 Functional Loss - LRRC8B ENSG00000197147 UTR5 Human protein_coding chr1:89990533 chr1:89990533 . . 0 21 hm5C_associated_SNPs_48150 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:89990533-89990534
64251 chr19 48967632 48967632 1 + C T UCEC 48967632 + 48967612 48967652 41 TTTGAGCTGGTGGTCATTCTCGAGGGGATGGTTGAGGCCAC TTTGAGCTGGTGGTCATTCTTGAGGGGATGGTTGAGGCCAC Direct Loss 0.963034952688812 0 0.964314 0.94563365 prediction 0.926069905377623 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967632 chr19:48967632 synonymous SNV . 0 21 hm5C_associated_SNPs_48151 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48967620-48967645
64251 chr9 140137978 140137978 1 + C T SKCM 140137978 + 140137958 140137998 41 GCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGA GCCGAGGAGGAGGGCGAGTTTGAGGAGGAGGCTGAGGAGGA Direct Loss 0.962993636948487 0 0.8967469 0.8411908 prediction 0.925987273896975 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137978 chr9:140137978 synonymous SNV . 0 21 hm5C_associated_SNPs_48153 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:140137943-140138049
64251 chr20 61472005 61472005 1 + C T STAD 61472005 + 61471985 61472025 41 CATTGGGGCCCAGGGGACACCGGGGATCTGCGACACCTCAG CATTGGGGCCCAGGGGACACTGGGGATCTGCGACACCTCAG Direct Loss 0.962934460720127 0 0.91313887 0.89374006 prediction 0.925868921440253 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61472005 chr20:61472005 nonsynonymous SNV 0.175 5 21 hm5C_associated_SNPs_48158 0 0 5 LARP4 POSTAR2 ENCODE chr20:61471979-61472039
64251 chr19 16980352 16980352 1 + C T SKCM 16980352 + 16980332 16980372 41 TGTACGAGGACCGGCAGATCCTGGAGGACGCAGCAGCGCTC TGTACGAGGACCGGCAGATCTTGGAGGACGCAGCAGCGCTC Direct Loss 0.962890271403224 0 0.92711747 0.9381875 prediction 0.925780542806448 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16980352 chr19:16980352 synonymous SNV . 0 21 hm5C_associated_SNPs_48162 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:16980340-16980358
64251 chr16 29831039 29831039 1 + C A BLCA 29831039 + 29831019 29831059 41 AGCCCCCCACTCCGATCCTCCGGGAGTAGTCTCTTCCCTCG AGCCCCCCACTCCGATCCTCAGGGAGTAGTCTCTTCCCTCG Direct Loss 0.962884434593669 0 0.91825294 0.88386595 prediction 0.925768869187338 Functional Loss - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29831039 chr16:29831039 synonymous SNV . 0 21 hm5C_associated_SNPs_48163 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29830946-29831044
64251 chr15 68099074 68099074 1 + C G rs187760642 68099074 + 68099054 68099094 41 TGGAGGAGAGGCGGAGCCAGCAGGGGCCCCCGTGAGGCTGC TGGAGGAGAGGCGGAGCCAGGAGGGGCCCCCGTGAGGCTGC Direct Loss 0.962831057845601 0 0.92198837 0.9000977 prediction 0.925662115691202 Functional Loss - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:68099074 chr15:68099074 nonsynonymous SNV 0.984 0 21 hm5C_associated_SNPs_48167 0 0 2 LIN28B POSTAR2 ENCODE chr15:68098995-68099077
64251 chr1 90098783 90098783 1 + C G rs545116633 90098783 + 90098763 90098803 41 CAAGCCATGAGCAGCGACCCCGCGGGCGACGCCGCCGTCCC CAAGCCATGAGCAGCGACCCGGCGGGCGACGCCGCCGTCCC Direct Loss 0.962824962421113 0 0.84443223 0.91098344 prediction 0.925649924842227 Functional Loss - LRRC8C ENSG00000230735 ncRNA_intronic Human sense_intronic chr1:90098783 chr1:90098783 . . 0 21 hm5C_associated_SNPs_48168 0 0 3 DDX3X POSTAR2 ENCODE chr1:90098716-90098820
64251 chr2 170550995 170550995 1 + C T rs201743910 170550995 + 170550975 170551015 41 TGCTGCAGTTGGCGGTCGGGCTAGAGAAGAGAGGCGCCTGC TGCTGCAGTTGGCGGTCGGGTTAGAGAAGAGAGGCGCCTGC Direct Loss 0.962819574616356 0 0.79420733 0.84979033 prediction 0.925639149232711 Functional Loss - PHOSPHO2;PHOSPHO2-KLHL23 ENSG00000144362 UTR5 Human protein_coding chr2:170550995 chr2:170550995 . . 0 21 hm5C_associated_SNPs_48169 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:170550995-170550996
64251 chr20 61443915 61443915 1 + C T UCEC 61443915 + 61443895 61443935 41 GTGGAGGAGGAAGGAAGCCCCGGGGACCCCGACCACGAGGC GTGGAGGAGGAAGGAAGCCCTGGGGACCCCGACCACGAGGC Direct Loss 0.962803132329117 0 0.909351 0.858684 prediction 0.925606264658234 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61443915 chr20:61443915 synonymous SNV . 0 21 hm5C_associated_SNPs_48170 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr20:61443900-61443920
64251 chr11 6631462 6631462 1 + C T UCEC 6631462 + 6631442 6631482 41 TTCTGTGGGAACTGGTGACACGGGAGGTACCCTTTGCTGAC TTCTGTGGGAACTGGTGACATGGGAGGTACCCTTTGCTGAC Direct Loss 0.962684565144229 0 0.89518034 0.76248634 prediction 0.925369130288459 Functional Loss - ILK ENSG00000166333 CDS Human protein_coding chr11:6631462 chr11:6631462 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_48181 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:6631458-6631490
64251 chr22 50633335 50633335 1 + C A OV 50633335 + 50633315 50633355 41 TGTGGCTGTTGCAGACCATCCGGGAGGTGCAGCCTGACGTG TGTGGCTGTTGCAGACCATCAGGGAGGTGCAGCCTGACGTG Direct Loss 0.962658049440365 0 0.9259219 0.91806114 prediction 0.925316098880729 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50633335 chr22:50633335 synonymous SNV . 0 21 hm5C_associated_SNPs_48183 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50633332-50633375
64251 chr7 63796694 63796694 1 + C A COAD 63796694 + 63796674 63796714 41 CCCCAGAAGAGTGGGAATGCCTGGACTCTGCTCAGCAGCGT CCCCAGAAGAGTGGGAATGCATGGACTCTGCTCAGCAGCGT Direct Loss 0.962622701024021 0 0.17619687 0.12732083 prediction 0.925245402048042 Functional Loss - ZNF736 ENSG00000234444 CDS Human protein_coding chr7:63796694 chr7:63796694 nonsynonymous SNV 0.437 3 21 hm5C_associated_SNPs_48186 0 0 1 ZNF622 POSTAR2 ENCODE chr7:63796667-63796757
64251 chr6 7390256 7390256 1 + C T rs112923583 7390256 + 7390236 7390276 41 ATGGACTACCGGCGGCTTCTCATGAGCCGGGTGGTCCCCGG ATGGACTACCGGCGGCTTCTTATGAGCCGGGTGGTCCCCGG Direct Loss 0.962494474375758 0 0.859353 0.80812573 prediction 0.924988948751517 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7390256 chr6:7390256 synonymous SNV . 0 21 hm5C_associated_SNPs_48197 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7390235-7390279
64251 chr3 9989099 9989099 1 - G A BLCA 9989099 - 9989079 9989119 41 GTGCATGGTGTAGGGTTGCTCGCGACAGACCTGCTGTCCAC GTGCATGGTGTAGGGTTGCTTGCGACAGACCTGCTGTCCAC Direct Loss 0.96242974345799 0 0.9005108 0.81354225 prediction 0.924859486915981 Functional Loss - PRRT3 ENSG00000163704 CDS Human protein_coding chr3:9989099 chr3:9989099 synonymous SNV . 0 21 hm5C_associated_SNPs_48199 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9989099-9989121
64251 chr11 7586921 7586921 1 + C T BLCA 7586921 + 7586901 7586941 41 TGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG TGGAGATGCTGGAGCTTCCTTAGGAGAGAGCAGCCCTCCTG Direct Loss 0.962407093476356 0 0.9317409 0.9052009 prediction 0.924814186952711 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7586921 chr11:7586921 stopgain 1.000 0 21 hm5C_associated_SNPs_48203 0 0 1 GRWD1 POSTAR2 ENCODE chr11:7586880-7586930
64251 chr2 239229372 239229372 1 + C A rs13398676 239229372 + 239229352 239229392 41 ATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCC ATTCGGAGGCCGCCGCTGACAGAGAAGCTGCTGAGCAAGCC Direct Loss 0.962389769455571 0 0.76680976 0.86224306 prediction 0.924779538911141 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239229372 chr2:239229372 synonymous SNV . 0 21 hm5C_associated_SNPs_48205 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:239229371-239229372
64251 chr19 7964965 7964965 1 + C T HNSC 7964965 + 7964945 7964985 41 ACCTGGAGGGGCTTTTCCCCCAGGAGCTAGCTCGGGCAGCC ACCTGGAGGGGCTTTTCCCCTAGGAGCTAGCTCGGGCAGCC Direct Loss 0.96238297781025 0 0.89838284 0.87602574 prediction 0.9247659556205 Functional Loss - LRRC8E ENSG00000171017;ENSG00000214248 CDS Human other chr19:7964965 chr19:7964965 stopgain 0.855 0 21 hm5C_associated_SNPs_48206 0 0 1 RBM15 POSTAR2 ENCODE chr19:7964956-7965004
64251 chr12 14927594 14927594 1 + C G KIRP 14927594 + 14927574 14927614 41 AGTACCTTACGGCGGAGATCCTGGAGCTGGCTGGCAACGCC AGTACCTTACGGCGGAGATCGTGGAGCTGGCTGGCAACGCC Direct Loss 0.962341233899497 0 0.91050744 0.91693056 prediction 0.924682467798994 Functional Loss - H2AFJ ENSG00000246705 CDS Human protein_coding chr12:14927594 chr12:14927594 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_48211 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:14927575-14927597
64251 chrX 47083076 47083076 1 + C T STAD 47083076 + 47083056 47083096 41 GATGAGAGTGGTGGTGGTGGCGGCAGTGACCCTGGAGAGGC GATGAGAGTGGTGGTGGTGGTGGCAGTGACCCTGGAGAGGC Direct Loss 0.96229933572443 0 0.5938233 0.43477285 prediction 0.924598671448859 Functional Loss - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083076 chrX:47083076 synonymous SNV . 0 21 hm5C_associated_SNPs_48215 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47083030-47083090
64251 chr7 8008678 8008678 1 + C T rs144431436 8008678 + 8008658 8008698 41 TTGCCCTGTCAGCACGATGCCTGGAGCGGTGGCGGCGGCGG TTGCCCTGTCAGCACGATGCTTGGAGCGGTGGCGGCGGCGG Direct Loss 0.962284193820075 0 0.4568522 0.6948685 prediction 0.924568387640151 Functional Loss - GLCCI1 ENSG00000233108 ncRNA_intronic Human antisense chr7:8008678 chr7:8008678 . . 0 21 hm5C_associated_SNPs_48219 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:8008648-8008682
64251 chr17 7324499 7324499 1 + C T COAD 7324499 + 7324479 7324519 41 GGACCTGGGTTCCCTGGTCTCAGGATGCCCCAGAGTCCCCT GGACCTGGGTTCCCTGGTCTTAGGATGCCCCAGAGTCCCCT Direct Loss 0.962236552046364 0 0.95357674 0.9406735 prediction 0.924473104092728 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324499 chr17:7324499 stopgain 0.023 0 21 hm5C_associated_SNPs_48225 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7324461-7324511
64251 chr14 101341414 101341414 1 + C T SKCM 101341414 + 101341394 101341434 41 ACCCAGGACTCTTTCATGACCAGGAGGCTGAGGCCCCTCAC ACCCAGGACTCTTTCATGACTAGGAGGCTGAGGCCCCTCAC Direct Loss 0.962214182985319 0 0.86068326 0.8535247 prediction 0.924428365970638 Functional Loss - MIR665 ENSG00000272291 ncRNA_exonic Human other chr14:101341414 chr14:101341414 . . 0 21 hm5C_associated_SNPs_48228 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr14:101341400-101341420
64251 chr16 5128804 5128804 1 + C T CESC 5128804 + 5128784 5128824 41 AGCGGTCGGCCTTCACGGAGCGGGATGCTGGGAGCGGGCTG AGCGGTCGGCCTTCACGGAGTGGGATGCTGGGAGCGGGCTG Direct Loss 0.962185902116323 0 0.89709693 0.62796634 prediction 0.924371804232645 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128804 chr16:5128804 nonsynonymous SNV 0.008 0 21 hm5C_associated_SNPs_48232 0 0 6 GRWD1 POSTAR2 ENCODE chr16:5128768-5128862
64251 chr16 74339290 74339290 1 + C A UCEC 74339290 + 74339270 74339310 41 TTCTGGATATCAGGAGCTACCTGGAAAAAGTCGCCACAGGC TTCTGGATATCAGGAGCTACATGGAAAAAGTCGCCACAGGC Direct Loss 0.962180695490449 0 0.52190477 0.48294604 prediction 0.924361390980897 Functional Loss - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339290 chr16:74339290 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_48234 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:74339278-74339306
64251 chr10 64564963 64564963 1 + C T HNSC 64564963 + 64564943 64564983 41 CCGATGCAGCCGGGCTTCCCCGAGAACCTGAGCAAGCTGAA CCGATGCAGCCGGGCTTCCCTGAGAACCTGAGCAAGCTGAA Direct Loss 0.962106649938472 0 0.8751986 0.7625327 prediction 0.924213299876943 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64564963 chr10:64564963 synonymous SNV . 0 21 hm5C_associated_SNPs_48236 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64564913-64565043
64251 chr7 129096476 129096476 1 + C T SKCM 129096476 + 129096456 129096496 41 GCTGCGAGGCCGCCGTGGCTCTCGAAGGGTATGGACTGAAG GCTGCGAGGCCGCCGTGGCTTTCGAAGGGTATGGACTGAAG Direct Loss 0.962097090831395 0 0.9035437 0.25689304 prediction 0.924194181662791 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096476 chr7:129096476 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48237 0 0 5 DDX24 POSTAR2 ENCODE chr7:129096468-129096516
64251 chr19 16791316 16791316 1 + C T SKCM 16791316 + 16791296 16791336 41 GTGGTGCGAGTCCGCAAGATCGCGGTGGGCATCCATCACGC GTGGTGCGAGTCCGCAAGATTGCGGTGGGCATCCATCACGC Direct Loss 0.962090704406356 0 0.8948993 0.52005893 prediction 0.924181408812711 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16791316 chr19:16791316 synonymous SNV . 0 21 hm5C_associated_SNPs_48239 0 0 1 PPIG POSTAR2 ENCODE chr19:16791236-16791353
64251 chr6 7404697 7404697 1 + C T PAAD 7404697 + 7404677 7404717 41 AGTTATCAGAATCCAAGGCTCGGGAGTTGTACCTGCAGGTC AGTTATCAGAATCCAAGGCTTGGGAGTTGTACCTGCAGGTC Direct Loss 0.96206530092788 0 0.9155021 0.43360978 prediction 0.924130601855759 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7404697 chr6:7404697 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_48242 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:7404643-7404704
64251 chr1 41483484 41483484 1 + C A UCEC 41483484 + 41483464 41483504 41 AGGCCGCTGTCCTCTACTCCCACGAGCAGGCTGCCGCCCTC AGGCCGCTGTCCTCTACTCCAACGAGCAGGCTGCCGCCCTC Direct Loss 0.962045425983213 0 0.6069005 0.048420608 prediction 0.924090851966425 Functional Loss - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483484 chr1:41483484 synonymous SNV . 0 21 hm5C_associated_SNPs_48246 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:41483483-41483484
64251 chr8 146278037 146278037 1 + C T UCEC 146278037 + 146278017 146278057 41 GGTACTCCCTGCGCGTCCCGCGGAGCCCGGCTTCCCGGCCC GGTACTCCCTGCGCGTCCCGTGGAGCCCGGCTTCCCGGCCC Direct Loss 0.962015283798507 0 0.92782533 0.90522146 prediction 0.924030567597014 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278037 chr8:146278037 synonymous SNV . 0 21 hm5C_associated_SNPs_48247 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:146277980-146278040
64251 chr6 24423221 24423221 1 + C T COAD 24423221 + 24423201 24423241 41 TTCATGGGAAGTGGCCTCATCTGGAGGCGCCTGCTTTCATT TTCATGGGAAGTGGCCTCATTTGGAGGCGCCTGCTTTCATT Direct Loss 0.961998448278465 0 0.8809952 0.9044728 prediction 0.923996896556931 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24423221 chr6:24423221 synonymous SNV . 0 21 hm5C_associated_SNPs_48251 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:24423200-24423229
64251 chr7 73609590 73609590 1 + C T CESC 73609590 + 73609570 73609610 41 AATCCCAACTCTGCTATCTTCGGGGGTGCCAGGCCTAGAGA AATCCCAACTCTGCTATCTTTGGGGGTGCCAGGCCTAGAGA Direct Loss 0.961976766045304 0 0.96414495 0.95012003 prediction 0.923953532090608 Functional Loss - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609590 chr7:73609590 synonymous SNV . 0 21 hm5C_associated_SNPs_48253 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:73609580-73609600
64251 chr22 29694812 29694812 1 + C T BLCA 29694812 + 29694792 29694832 41 GCTTCCCTCCAAGAGGACCCCGGGGTTCCCGAGGGAACCCC GCTTCCCTCCAAGAGGACCCTGGGGTTCCCGAGGGAACCCC Direct Loss 0.961946068381485 0 0.86720204 0.65776265 prediction 0.92389213676297 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29694812 chr22:29694812 nonsynonymous SNV 0.846 3 21 hm5C_associated_SNPs_48257 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:29694760-29694860
64251 chr4 3446132 3446132 1 + C G rs1987546 3446132 + 3446112 3446152 41 GTGGAACAGTGCGAGTGCTTCGGGGGCCGGACCTGGTGCGA GTGGAACAGTGCGAGTGCTTGGGGGGCCGGACCTGGTGCGA Direct Loss 0.961937183689968 0 0.9261302 0.91192025 prediction 0.923874367379936 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3446132 chr4:3446132 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_48259 0 0 2 PPIG POSTAR2 ENCODE chr4:3446053-3446146
64251 chr7 45928356 45928356 1 + C A LUSC 45928356 + 45928336 45928376 41 CAGTGCGCGCCCTGCTCCGCCGAGAAGCTCGCGCTCTGCCC CAGTGCGCGCCCTGCTCCGCAGAGAAGCTCGCGCTCTGCCC Direct Loss 0.961914794703468 0 0.58907515 0.7125521 prediction 0.923829589406936 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45928356 chr7:45928356 synonymous SNV . 0 21 hm5C_associated_SNPs_48260 0 0 7 DDX3X POSTAR2 ENCODE chr7:45928262-45928356
64251 chr9 35736451 35736451 1 + C A UCEC 35736451 + 35736431 35736471 41 ACCAGCTGGAGCTGCCTGCCCTGCAGTCAGAAGTGCCGAAA ACCAGCTGGAGCTGCCTGCCATGCAGTCAGAAGTGCCGAAA Direct Loss 0.961859084592168 0 0.16481301 0.11923048 prediction 0.923718169184335 Functional Loss - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35736451 chr9:35736451 nonsynonymous SNV 0.516 2 21 hm5C_associated_SNPs_48263 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35736435-35736463
64251 chr2 158115029 158115029 1 + C T rs150509830 158115029 + 158115009 158115049 41 CCTAACAAGCAGAAGACAGACGGGAGAGGCACCAAACCTGA CCTAACAAGCAGAAGACAGATGGGAGAGGCACCAAACCTGA Direct Loss 0.961832715781637 0 0.66576123 0.44891745 prediction 0.923665431563274 Functional Loss - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158115029 chr2:158115029 synonymous SNV . 0 21 hm5C_associated_SNPs_48265 0 0 3 DDX3X POSTAR2 ENCODE chr2:158115008-158115044
64251 chrX 15693873 15693873 1 + C T rs190788254 15693873 + 15693853 15693893 41 CGTGCGGGATCCTCGGGTACCGGGAGCGAACGAGGAGGTTC CGTGCGGGATCCTCGGGTACTGGGAGCGAACGAGGAGGTTC Direct Loss 0.961801166467661 0 0.92021734 0.9106332 prediction 0.923602332935321 Functional Loss - CA5BP1 ENSG00000186312 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:15693873 chrX:15693873 . . 0 21 hm5C_associated_SNPs_48272 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chrX:15693854-15693902
64251 chr13 113976660 113976660 1 + C T UCEC 113976660 + 113976640 113976680 41 CGCTGTGGGTGGTGCCCTGGCGGGGCTGGTCCTCATCGTCC CGCTGTGGGTGGTGCCCTGGTGGGGCTGGTCCTCATCGTCC Direct Loss 0.961800918318583 0 0.92941344 0.8576722 prediction 0.923601836637165 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113976660 chr13:113976660 nonsynonymous SNV 0.983 3 21 hm5C_associated_SNPs_48273 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:113976615-113976676
64251 chr16 90097731 90097731 1 + C A UCEC 90097731 + 90097711 90097751 41 AGGAGCATGTCAGCCGCATCCGGGAGGAGCTGGACCGCGAG AGGAGCATGTCAGCCGCATCAGGGAGGAGCTGGACCGCGAG Direct Loss 0.961798726076807 0 0.9236071 0.90571165 prediction 0.923597452153615 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90097731 chr16:90097731 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_48274 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:90097723-90097751
64251 chr17 57643053 57643053 1 + C G HNSC 57643053 + 57643033 57643073 41 ATGTCCCGGTTTCCCGCAGTCGCGGGCAGGGCGCCAAGGCG ATGTCCCGGTTTCCCGCAGTGGCGGGCAGGGCGCCAAGGCG Direct Loss 0.961795542189457 0 0.68484676 0.4248318 prediction 0.923591084378914 Functional Loss - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57643053 chr17:57643053 synonymous SNV . 0 21 hm5C_associated_SNPs_48275 0 0 3 DDX3X POSTAR2 ENCODE chr17:57642984-57643086
64251 chr1 226027611 226027611 1 + C T GBM 226027611 + 226027591 226027631 41 CTCCTCCTGGGACAGCGTTTCGGGAGGTTTCTTGGCCTCAC CTCCTCCTGGGACAGCGTTTTGGGAGGTTTCTTGGCCTCAC Direct Loss 0.961794499046137 0 0.955202 0.93117535 prediction 0.923588998092275 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027611 chr1:226027611 synonymous SNV . 0 21 hm5C_associated_SNPs_48276 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:226027596-226027632
64251 chr5 176085109 176085109 1 + C A rs565552232 176085109 + 176085089 176085129 41 GCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGGGATC GCTGGAAGCCATGGGACTGGAGGGAGCCTGTTTGGGGGATC Direct Loss 0.961772198056672 0 0.89615846 0.8876174 prediction 0.923544396113344 Functional Loss - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085109 chr5:176085109 . . 0 21 hm5C_associated_SNPs_48279 0 0 6 DDX6 POSTAR2 ENCODE chr5:176085097-176085148
64251 chr15 41102889 41102889 1 + C A rs533156538 41102889 + 41102869 41102909 41 GGACCCAAGCCCAGCAGACACAGGATCTGCTAACGCAGCTG GGACCCAAGCCCAGCAGACAAAGGATCTGCTAACGCAGCTG Direct Loss 0.961724510614416 0 0.79883146 0.7401215 prediction 0.923449021228832 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41102889 chr15:41102889 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_48281 0 0 2 PPIG POSTAR2 ENCODE chr15:41102885-41102962
64251 chr11 77301362 77301362 1 + C T STAD 77301362 + 77301342 77301382 41 GCGTGATGATGCAGATGATGCTGGGGGGCATGTCCCCCGAG GCGTGATGATGCAGATGATGTTGGGGGGCATGTCCCCCGAG Direct Loss 0.961686145508006 0 0.90601414 0.901503 prediction 0.923372291016012 Functional Loss - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301362 chr11:77301362 synonymous SNV . 0 21 hm5C_associated_SNPs_48282 0 0 2 LIN28B POSTAR2 ENCODE chr11:77301342-77301412
64251 chr17 80439027 80439027 1 + C T BLCA 80439027 + 80439007 80439047 41 ACAAGAAGCTGGAGGCTCTTCAGGAAAGCCTTCCCCCTGCT ACAAGAAGCTGGAGGCTCTTTAGGAAAGCCTTCCCCCTGCT Direct Loss 0.96167984681341 0 0.88317907 0.8175708 prediction 0.923359693626819 Functional Loss - NARF ENSG00000141562 CDS Human protein_coding chr17:80439027 chr17:80439027 stopgain 0.894 1 21 hm5C_associated_SNPs_48284 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:80439027-80439028
64251 chr2 177016507 177016507 1 + C T COAD 177016507 + 177016487 177016527 41 GGGCGCAGACTTCCAGCCCCCGGGGCTCTACCCACGGCCCG GGGCGCAGACTTCCAGCCCCTGGGGCTCTACCCACGGCCCG Direct Loss 0.961667788965196 0 0.9208581 0.89655834 prediction 0.923335577930391 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016507 chr2:177016507 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_48286 0 0 1 DGCR8 POSTAR2 ENCODE chr2:177016486-177016520
64251 chr20 49197851 49197851 1 + C T UCEC 49197851 + 49197831 49197871 41 GGGTCGTGGGGGGAAGTCTTCGAGGTGCCCAGGCTGCCTCC GGGTCGTGGGGGGAAGTCTTTGAGGTGCCCAGGCTGCCTCC Direct Loss 0.961666969267383 0 0.933569 0.9184493 prediction 0.923333938534766 Functional Loss - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197851 chr20:49197851 stopgain 0.004 0 21 hm5C_associated_SNPs_48287 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:49197819-49197855
64251 chr2 177017848 177017848 1 + C G rs1063656 177017848 + 177017828 177017868 41 GGGCAGCCCCCTCCCTAGAGCGGGATGGGGATGGGAGGGGG GGGCAGCCCCCTCCCTAGAGGGGGATGGGGATGGGAGGGGG Direct Loss 0.961659409406509 0 0.9006264 0.9038307 prediction 0.923318818813017 Functional Loss - HOXD4 ENSG00000170166 UTR3 Human protein_coding chr2:177017848 chr2:177017848 . . 0 21 hm5C_associated_SNPs_48289 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr2:177017848-177017849
64251 chr19 17972938 17972938 1 + C T UCEC 17972938 + 17972918 17972958 41 CCCCTGCGGGTGAAGAACTTCGGGATCTGGCTGCGCTATGA CCCCTGCGGGTGAAGAACTTTGGGATCTGGCTGCGCTATGA Direct Loss 0.961620774508801 0 0.91427135 0.9051723 prediction 0.923241549017603 Functional Loss - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972938 chr19:17972938 synonymous SNV . 0 21 hm5C_associated_SNPs_48293 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17972900-17972957
64251 chr19 36616652 36616652 1 + C T SKCM 36616652 + 36616632 36616672 41 TCGTGACGGTGGGGGACTTCCCGGAGGAGGACTACGGGTTG TCGTGACGGTGGGGGACTTCTCGGAGGAGGACTACGGGTTG Direct Loss 0.961606353800141 0 0.92760265 0.93781126 prediction 0.923212707600283 Functional Loss - TBCB ENSG00000105254 CDS Human protein_coding chr19:36616652 chr19:36616652 nonsynonymous SNV 0.764 5 21 hm5C_associated_SNPs_48295 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:36616619-36616809
64251 chr9 6413449 6413449 1 + C G rs201234807 6413449 + 6413429 6413469 41 GGGGCGCGGCGCCCAGAGCTCAGGGGGAGACAAAGGGGACC GGGGCGCGGCGCCCAGAGCTGAGGGGGAGACAAAGGGGACC Direct Loss 0.961599680393341 0 0.9231361 0.88311815 prediction 0.923199360786682 Functional Loss - UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413449 chr9:6413449 . . 0 21 hm5C_associated_SNPs_48296 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:6413440-6413460
64251 chr18 71825498 71825498 1 + C T UCEC 71825498 + 71825478 71825518 41 GAAGCAAGGAACGGTGTATGCGCAAGTGAAAGAGGTGTGGG GAAGCAAGGAACGGTGTATGTGCAAGTGAAAGAGGTGTGGG Direct Loss 0.961594504543667 0 0.82438874 0.3677173 prediction 0.923189009087333 Functional Loss - TIMM21 ENSG00000075336 CDS Human protein_coding chr18:71825498 chr18:71825498 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_48297 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr18:71825413-71825511
64251 chr20 45354005 45354005 1 + C T BLCA 45354005 + 45353985 45354025 41 GGCCGCGCTGTGGTTGGCTTCGCCATTTCCCTCTCCTCCAT GGCCGCGCTGTGGTTGGCTTTGCCATTTCCCTCTCCTCCAT Direct Loss 0.961527323056089 0 0.30954993 0.1073876 prediction 0.923054646112178 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354005 chr20:45354005 synonymous SNV . 0 21 hm5C_associated_SNPs_48304 2 0 2 XPO5 POSTAR2 ENCODE chr20:45353931-45354016
64251 chr14 103568719 103568719 1 + C A rs563565267 103568719 + 103568699 103568739 41 GCTGGCCCGCGTGGTGAGCGCGGAGGAGGAAGCCCACCCTT GCTGGCCCGCGTGGTGAGCGAGGAGGAGGAAGCCCACCCTT Direct Loss 0.961525510591388 0 0.9075422 0.90567577 prediction 0.923051021182776 Functional Loss - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103568719 chr14:103568719 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_48305 0 0 1 SRSF7 POSTAR2 ENCODE chr14:103568641-103568721
64251 chr2 70315374 70315374 1 + C A READ 70315374 + 70315354 70315394 41 AGCAGATTTGCCTGGTCATGCTGGAGACGCTCTCCCAGTCT AGCAGATTTGCCTGGTCATGATGGAGACGCTCTCCCAGTCT Direct Loss 0.961498453157001 0 0.8797827 0.85863173 prediction 0.922996906314002 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315374 chr2:70315374 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_48307 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70315327-70315383
64251 chr1 223943283 223943283 1 + C G HNSC 223943283 + 223943263 223943303 41 CCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCGGCAG CCTTCCTGGTGGGGCTCATTGAGAAGCACCGACGGCGGCAG Direct Loss 0.961482840675793 0 0.9006562 0.86336523 prediction 0.922965681351585 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943283 chr1:223943283 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_48310 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr12 72148896 72148896 1 + C A rs190327770 72148896 + 72148876 72148916 41 GACACTCGGGCTCGGGCGGCCGGGAAGCGACGGGATGGCTG GACACTCGGGCTCGGGCGGCAGGGAAGCGACGGGATGGCTG Direct Loss 0.961409580456603 0 0.92897785 0.9369106 prediction 0.922819160913206 Functional Loss - RAB21 ENSG00000080371 UTR5 Human protein_coding chr12:72148896 chr12:72148896 . . 0 21 hm5C_associated_SNPs_48318 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:72148876-72148912
64251 chr2 96934237 96934237 1 + C T UCEC 96934237 + 96934217 96934257 41 ATGACACAGTGAAGCTGTACCGGGAGGAAGAGGATGACTGG ATGACACAGTGAAGCTGTACTGGGAGGAAGAGGATGACTGG Direct Loss 0.961408562337819 0 0.9360867 0.92499715 prediction 0.922817124675638 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96934237 chr2:96934237 nonsynonymous SNV 0.976 2 21 hm5C_associated_SNPs_48319 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:96934207-96934243
64251 chr11 65292585 65292585 1 + C G rs376947297 65292585 + 65292565 65292605 41 GCTCGGGCGGCCGGAGGACCCGGAGCTAAGGCGCCCGAACC GCTCGGGCGGCCGGAGGACCGGGAGCTAAGGCGCCCGAACC Direct Loss 0.961402224652254 0 0.9152256 0.9156871 prediction 0.922804449304508 Functional Loss - SCYL1 ENSG00000142186 UTR5 Human protein_coding chr11:65292585 chr11:65292585 . . 0 21 hm5C_associated_SNPs_48321 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:65292580-65292600
64251 chr14 24909598 24909598 1 - G T UCEC 24909598 - 24909578 24909618 41 TCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCT TCAGGCCACCAATTCTTCCCATGGATACACATCGGGGACCT Direct Loss 0.961390504002417 0 0.18440661 0.18392426 prediction 0.922781008004833 Functional Loss - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909598 chr14:24909598 synonymous SNV . 0 21 hm5C_associated_SNPs_48324 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr19 17972996 17972996 1 + C T SKCM 17972996 + 17972976 17973016 41 ACAACATGTACCGGGAATACCGGGACCTGACCACCGCAGGC ACAACATGTACCGGGAATACTGGGACCTGACCACCGCAGGC Direct Loss 0.961380541496904 0 0.91992056 0.86219656 prediction 0.922761082993809 Functional Loss - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972996 chr19:17972996 nonsynonymous SNV 0.989 2 21 hm5C_associated_SNPs_48325 0 0 1 METAP2 POSTAR2 ENCODE chr19:17972995-17973028
64251 chr19 747245 747245 1 + C T rs113424036 747245 + 747225 747265 41 CCAGAGAGGGCCCCGGGAGCCGGGGGTGGGTACTGAGGCCT CCAGAGAGGGCCCCGGGAGCTGGGGGTGGGTACTGAGGCCT Direct Loss 0.961372268517334 0 0.93783295 0.9200674 prediction 0.922744537034669 Functional Loss - PALM ENSG00000099864 UTR3 Human protein_coding chr19:747245 chr19:747245 . . 0 21 hm5C_associated_SNPs_48326 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:747242-747271
64251 chr8 75756241 75756241 1 + C T COAD 75756241 + 75756221 75756261 41 GGATGAAAATCTTGCAAAATCGGCAGAGGCTTGGGCGGCTA GGATGAAAATCTTGCAAAATTGGCAGAGGCTTGGGCGGCTA Direct Loss 0.961367852731117 0 0.74296063 0.3032392 prediction 0.922735705462234 Functional Loss - PI15 ENSG00000137558 CDS Human protein_coding chr8:75756241 chr8:75756241 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_48327 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:75756239-75756265
64251 chr16 57503125 57503125 1 + C T SKCM 57503125 + 57503105 57503145 41 AGTGCTCGGTGGAGTTCACCCTCGATGTGCGGTGCAATGAA AGTGCTCGGTGGAGTTCACCTTCGATGTGCGGTGCAATGAA Direct Loss 0.961357669032423 0 0.9109592 0.79845023 prediction 0.922715338064846 Functional Loss - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57503125 chr16:57503125 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_48329 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:57503108-57503135
64251 chr14 100705962 100705962 1 + C T CESC 100705962 + 100705942 100705982 41 CTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCCC CTGCGCGCCGAGGACGGCTTTGAGGATCAGATTCTCATCCC Direct Loss 0.961356275002542 0 0.8964246 0.72525346 prediction 0.922712550005085 Functional Loss - YY1 ENSG00000100811 CDS Human protein_coding chr14:100705962 chr14:100705962 synonymous SNV . 0 21 hm5C_associated_SNPs_48330 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:100705930-100705966
64251 chr3 49049964 49049964 1 + C T LUAD 49049964 + 49049944 49049984 41 ACTTGGTAGGGCGTGGGTACCGGGGATTGGGGGTCTCGGCT ACTTGGTAGGGCGTGGGTACTGGGGATTGGGGGTCTCGGCT Direct Loss 0.961337628020181 0 0.9395237 0.90158075 prediction 0.922675256040363 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049964 chr3:49049964 nonsynonymous SNV 0.088 2 21 hm5C_associated_SNPs_48332 0 0 49 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49049907-49049969
64251 chr14 37132628 37132628 1 + C T rs373446060 37132628 + 37132608 37132648 41 GCCAAGGTGCCCACGCCACCCGGGGTGCCTGCCATCCCCGG GCCAAGGTGCCCACGCCACCTGGGGTGCCTGCCATCCCCGG Direct Loss 0.961322063293681 0 0.9396744 0.9226457 prediction 0.922644126587361 Functional Loss - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132628 chr14:37132628 synonymous SNV . 0 21 hm5C_associated_SNPs_48334 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:37132602-37132634
64251 chr10 54074743 54074743 1 + C T OV 54074743 + 54074723 54074763 41 AGTACTGCGCTAGTCCCACCCGCGGAGGGGACGCAGGCGTG AGTACTGCGCTAGTCCCACCTGCGGAGGGGACGCAGGCGTG Direct Loss 0.961236283466084 0 0.68537784 0.5872376 prediction 0.922472566932167 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074743 chr10:54074743 nonsynonymous SNV 0.556 2 21 hm5C_associated_SNPs_48342 0 0 7 BUD13 POSTAR2 ENCODE chr10:54074637-54074763
64251 chr1 27657266 27657266 1 + C T UCEC 27657266 + 27657246 27657286 41 GCACATCCACAGGAGTCATTCGGGACTTCGCGGGCCCCTAC GCACATCCACAGGAGTCATTTGGGACTTCGCGGGCCCCTAC Direct Loss 0.961206744944379 0 0.93953514 0.8476705 prediction 0.922413489888759 Functional Loss - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27657266 chr1:27657266 nonsynonymous SNV 0.992 4 21 hm5C_associated_SNPs_48346 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:27657255-27657283
64251 chr19 36631958 36631958 1 + C G LGG 36631958 + 36631938 36631978 41 AAGGGCGGCGGCGGCGGCGGCGGGGGAGGCGGGGGCCTGGG AAGGGCGGCGGCGGCGGCGGGGGGGGAGGCGGGGGCCTGGG Direct Loss 0.961176138066778 0 0.93225265 0.93041146 prediction 0.922352276133556 Functional Loss - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36631958 chr19:36631958 synonymous SNV . 0 21 hm5C_associated_SNPs_48350 0 0 4 FAM120A POSTAR2 ENCODE chr19:36631956-36632051
64251 chr19 17430861 17430861 1 + C T rs144729786 17430861 + 17430841 17430881 41 CCGGGCGACAGGGGCGGGCCCGGGGTGGCCTGACCTACCAG CCGGGCGACAGGGGCGGGCCTGGGGTGGCCTGACCTACCAG Direct Loss 0.961164200480412 0 0.92058885 0.9078661 prediction 0.922328400960825 Functional Loss - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17430861 chr19:17430861 . . 0 21 hm5C_associated_SNPs_48352 0 0 4 DDX55 POSTAR2 ENCODE chr19:17430829-17430883
64251 chr12 53663123 53663123 1 + C T BLCA 53663123 + 53663103 53663143 41 CCTGCTTGGTGCAGTGCTCTCGCGAGGCTGCTCCCCAGGAC CCTGCTTGGTGCAGTGCTCTTGCGAGGCTGCTCCCCAGGAC Direct Loss 0.961134295703414 0 0.9590254 0.9398632 prediction 0.922268591406829 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53663123 chr12:53663123 nonsynonymous SNV 0.913 1 21 hm5C_associated_SNPs_48356 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:53663090-53663128
64251 chr1 36752564 36752564 1 + C G rs187894311 36752564 + 36752544 36752584 41 CAGTTTCTGAGCTGAGTCCTCGGGAGCGAAGCCCAGCTCTC CAGTTTCTGAGCTGAGTCCTGGGGAGCGAAGCCCAGCTCTC Direct Loss 0.961031741761096 0 0.92025733 0.8837775 prediction 0.922063483522191 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752564 chr1:36752564 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_48367 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:36752543-36752571
64251 chr4 44691392 44691392 1 + C T UCEC 44691392 + 44691372 44691412 41 ATTCCAGTGTGACCGTTCATCGGGATAGTAGCCTTGCTCTG ATTCCAGTGTGACCGTTCATTGGGATAGTAGCCTTGCTCTG Direct Loss 0.960917221936244 0 0.9275303 0.8791776 prediction 0.921834443872488 Functional Loss - GUF1 ENSG00000151806 CDS Human protein_coding chr4:44691392 chr4:44691392 nonsynonymous SNV 0.986 3 21 hm5C_associated_SNPs_48374 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:44691371-44691400
64251 chr6 146864948 146864948 1 + C A rs543942735 146864948 + 146864928 146864968 41 CCGGGGGCGCGGCGGCAGAGCGCGAGGCCGGGCAGGGGGCC CCGGGGGCGCGGCGGCAGAGAGCGAGGCCGGGCAGGGGGCC Direct Loss 0.960872383521199 0 0.9116194 0.90973985 prediction 0.921744767042397 Functional Loss - RAB32 ENSG00000118508 UTR5 Human protein_coding chr6:146864948 chr6:146864948 . . 0 21 hm5C_associated_SNPs_48379 0 0 4 DDX3X POSTAR2 ENCODE chr6:146864916-146864967
64251 chr19 863170 863170 1 + C A rs564333282 863170 + 863150 863190 41 GCTCGCGCGTTTGCGGCAACCGCAAGAAGCCCGGGATCTAC GCTCGCGCGTTTGCGGCAACAGCAAGAAGCCCGGGATCTAC Direct Loss 0.960836554802502 0 0.9005059 0.78295565 prediction 0.921673109605004 Functional Loss - CFD ENSG00000197766 CDS Human protein_coding chr19:863170 chr19:863170 nonsynonymous SNV 0.480 1 21 hm5C_associated_SNPs_48381 0 0 5 CSTF2T POSTAR2 ENCODE chr19:863114-863171
64251 chr17 73703316 73703316 1 + C G rs149170453 73703316 + 73703296 73703336 41 TGCCCGGTGAGCGCAGCCAGCAGGAGCTGAGCAGCGGGGGA TGCCCGGTGAGCGCAGCCAGGAGGAGCTGAGCAGCGGGGGA Direct Loss 0.960823580479809 0 0.90408576 0.62179935 prediction 0.921647160959618 Functional Loss - SAP30BP ENSG00000161526 UTR3 Human protein_coding chr17:73703316 chr17:73703316 . . 0 21 hm5C_associated_SNPs_48382 0 0 1 UPF1 POSTAR2 ENCODE chr17:73703278-73703358
64251 chr11 67376990 67376990 1 + C T UCEC 67376990 + 67376970 67377010 41 GCAAGGACCGGGAGATCTTACGCCATGATCCTCACAAGCTG GCAAGGACCGGGAGATCTTATGCCATGATCCTCACAAGCTG Direct Loss 0.960809322890659 0 0.32188147 0.276119 prediction 0.921618645781318 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376990 chr11:67376990 nonsynonymous SNV 0.996 5 21 hm5C_associated_SNPs_48383 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:67376972-67376998
64251 chr19 41725315 41725315 1 + C T COAD 41725315 + 41725295 41725335 41 CCCATGGCGTGGCGGTGCCCCAGGATGGGCAGGGTCCCGCT CCCATGGCGTGGCGGTGCCCTAGGATGGGCAGGGTCCCGCT Direct Loss 0.96080338209827 0 0.8522833 0.80456746 prediction 0.92160676419654 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41725315 chr19:41725315 synonymous SNV . 0 21 hm5C_associated_SNPs_48384 0 0 2 DDX3X POSTAR2 ENCODE chr19:41725297-41725383
64251 chr20 43160615 43160615 1 + C A rs555325390 43160615 + 43160595 43160635 41 GCACGGAGAGGCGGCGAGACCGCAGGTGAGCAGGAGCCGGG GCACGGAGAGGCGGCGAGACAGCAGGTGAGCAGGAGCCGGG Direct Loss 0.960790343521024 0 0.4713434 0.55538076 prediction 0.921580687042047 Functional Loss - PKIG ENSG00000168734 UTR5 Human protein_coding chr20:43160615 chr20:43160615 . . 0 21 hm5C_associated_SNPs_48386 0 0 3 DDX3X POSTAR2 ENCODE chr20:43160535-43160615
64251 chr7 29724845 29724845 1 - G C rs140627398 29724845 - 29724825 29724865 41 GCTCCTGCCTTCTTGGCTCTCGGGGCACAGCGCGCGGCCCG GCTCCTGCCTTCTTGGCTCTGGGGGCACAGCGCGCGGCCCG Direct Loss 0.960753075496362 0 0.95907664 0.92529106 prediction 0.921506150992723 Functional Loss - DPY19L2P3;ZNRF2P2 ENSG00000225264;ENSG00000227855 ncRNA_exonic Human other chr7:29724845 chr7:29724845 . . 0 21 hm5C_associated_SNPs_48392 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:29724804-29724895
64251 chr17 79205672 79205672 1 - G A rs61745844 79205672 - 79205652 79205692 41 ACAGCCATTCAGGGGCCAGCCGGGAGCCGGGTGACCTGGCA ACAGCCATTCAGGGGCCAGCTGGGAGCCGGGTGACCTGGCA Direct Loss 0.96074162693967 0 0.93870735 0.927072 prediction 0.92148325387934 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205672 chr17:79205672 nonsynonymous SNV 0.294 1 21 hm5C_associated_SNPs_48395 0 0 4 BUD13 POSTAR2 ENCODE chr17:79205671-79205720
64251 chr19 39398245 39398245 1 + C G rs35941401 39398245 + 39398225 39398265 41 CCTGAGCCCGAGGGCGAGGACGAGAAATCCGGCCCCTGCAG CCTGAGCCCGAGGGCGAGGAGGAGAAATCCGGCCCCTGCAG Direct Loss 0.96073017519952 0 0.8979036 0.9086442 prediction 0.92146035039904 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398245 chr19:39398245 nonsynonymous SNV 0.755 0 21 hm5C_associated_SNPs_48397 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39398234-39398262
64251 chr1 181018307 181018307 1 + C T SKCM 181018307 + 181018287 181018327 41 CCACATATGACAGTGTCACTCGGCAGAAGGAGCCACGGGCC CCACATATGACAGTGTCACTTGGCAGAAGGAGCCACGGGCC Direct Loss 0.960683685277497 0 0.90648675 0.44386145 prediction 0.921367370554993 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018307 chr1:181018307 nonsynonymous SNV 0.095 3 21 hm5C_associated_SNPs_48402 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr20 25656432 25656432 1 - G A UCEC 25656432 - 25656412 25656452 41 GGGAGTGTGGGCGAAGGTTTCGGGATAAGTCCTCCTATAAC GGGAGTGTGGGCGAAGGTTTTGGGATAAGTCCTCCTATAAC Direct Loss 0.960677670830234 0 0.94451165 0.91437936 prediction 0.921355341660468 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656432 chr20:25656432 nonsynonymous SNV 0.001 2 21 hm5C_associated_SNPs_48403 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr20:25656416-25656454
64251 chr15 49170590 49170590 1 + C T UCEC 49170590 + 49170570 49170610 41 TGGCGGCGCCAGAGGGGAAACGGAGCCTTGCTAACGGGCCC TGGCGGCGCCAGAGGGGAAATGGAGCCTTGCTAACGGGCCC Direct Loss 0.960600948612391 0 0.91630125 0.9077169 prediction 0.921201897224782 Functional Loss - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170590 chr15:49170590 nonsynonymous SNV 0.003 2 21 hm5C_associated_SNPs_48407 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:49170580-49170640
64251 chr12 27933870 27933870 1 + C T rs551232636 27933870 + 27933850 27933890 41 TCGTGGCCCTCGGGGACTTCCTGGGGGGACCCCTGGCCCCT TCGTGGCCCTCGGGGACTTCTTGGGGGGACCCCTGGCCCCT Direct Loss 0.960475636880024 0 0.9607967 0.9672642 prediction 0.920951273760049 Functional Loss - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933870 chr12:27933870 synonymous SNV . 0 21 hm5C_associated_SNPs_48415 0 0 1 NKRF POSTAR2 ENCODE chr12:27933823-27933915
64251 chr3 143691549 143691549 1 + C A BLCA 143691549 + 143691529 143691569 41 GCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCG GCGCAGCTCGACCAGAGCATATGCAAGCGGGCCACCGGCCG Direct Loss 0.960459289501849 0 0.9060895 0.32500803 prediction 0.920918579003698 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691549 chr3:143691549 synonymous SNV . 0 21 hm5C_associated_SNPs_48416 0 0 1 SND1 POSTAR2 ENCODE chr3:143691446-143691714
64251 chr19 808577 808577 1 + C T rs148751202 808577 + 808557 808597 41 CTGAACGGGCACAAGCTGCACGGGAAGCCCATCCGCATCAC CTGAACGGGCACAAGCTGCATGGGAAGCCCATCCGCATCAC Direct Loss 0.960454839751485 0 0.52815485 0.34380287 prediction 0.92090967950297 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808577 chr19:808577 synonymous SNV . 0 21 hm5C_associated_SNPs_48417 0 0 8 FXR2 POSTAR2 GSE39682,GSM977620 chr19:808559-808578
64251 chr19 41822663 41822663 1 + C T STAD 41822663 + 41822643 41822683 41 TCTACTGTGCTGAGGTGGCCCGGCAGGGCACTGCCCGGCCC TCTACTGTGCTGAGGTGGCCTGGCAGGGCACTGCCCGGCCC Direct Loss 0.960448815291402 0 0.3324064 0.4214851 prediction 0.920897630582803 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822663 chr19:41822663 nonsynonymous SNV 0.994 3 21 hm5C_associated_SNPs_48421 0 0 1 RBM15 POSTAR2 ENCODE chr19:41822577-41822696
64251 chr2 216176960 216176960 1 + C T rs113290372 216176960 + 216176940 216176980 41 CCCGCCTTGGCGGCGGCCGGCGGGACCCGGCACTGCAGGGG CCCGCCTTGGCGGCGGCCGGTGGGACCCGGCACTGCAGGGG Direct Loss 0.960445527675502 0 0.88390505 0.6556343 prediction 0.920891055351003 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216176960 chr2:216176960 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_48422 0 0 1 DDX3X POSTAR2 ENCODE chr2:216176905-216176960
64251 chr12 54396248 54396248 1 + C A HNSC 54396248 + 54396228 54396268 41 AACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCTGCCC AACTGGATTCACGCCCGCTCAACGAGGAAGAAGCGCTGCCC Direct Loss 0.960404434238175 0 0.28164172 0.2787574 prediction 0.92080886847635 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54396248 chr12:54396248 synonymous SNV . 0 21 hm5C_associated_SNPs_48430 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:54396229-54396255
64251 chr16 88781140 88781140 1 + C T rs2340976 88781140 + 88781120 88781160 41 CGCTGTGGCCAGGGGGCCTGCAGGAGGTGAGTCCCTGTCCC CGCTGTGGCCAGGGGGCCTGTAGGAGGTGAGTCCCTGTCCC Direct Loss 0.96039852005539 0 0.9140213 0.9116008 prediction 0.92079704011078 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781140 chr16:88781140 synonymous SNV . 0 21 hm5C_associated_SNPs_48431 0 0 2 GEMIN5 POSTAR2 ENCODE chr16:88781086-88781143
64251 chr1 149871843 149871843 1 + C T COAD 149871843 + 149871823 149871863 41 GCTGTGGTGAGCTCTCGTTTCGAGGGACTGAGCCCCCTACA GCTGTGGTGAGCTCTCGTTTTGAGGGACTGAGCCCCCTACA Direct Loss 0.960372894773818 0 0.9552723 0.92865616 prediction 0.920745789547635 Functional Loss - BOLA1 ENSG00000178096 CDS Human protein_coding chr1:149871843 chr1:149871843 synonymous SNV . 0 21 hm5C_associated_SNPs_48433 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:149871828-149871858
64251 chr1 114523943 114523943 1 + C T SKCM 114523943 + 114523923 114523963 41 GGTGGACAGCTCAGTATTCCCAGCAGAGGGGCTGATCCCCC GGTGGACAGCTCAGTATTCCTAGCAGAGGGGCTGATCCCCC Direct Loss 0.960345121789253 0 0.6892163 0.46618736 prediction 0.920690243578506 Functional Loss - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114523943 chr1:114523943 nonsynonymous SNV 0.962 5 21 hm5C_associated_SNPs_48434 0 0 1 SND1 POSTAR2 ENCODE chr1:114523935-114523982
64251 chrX 30237294 30237294 1 + C T SKCM 30237294 + 30237274 30237314 41 CTCAGTTCCTGGGACTTTCCCAGGAGAAAGCTTCTGATGCC CTCAGTTCCTGGGACTTTCCTAGGAGAAAGCTTCTGATGCC Direct Loss 0.960323846322632 0 0.9367428 0.90643334 prediction 0.920647692645264 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237294 chrX:30237294 synonymous SNV . 0 21 hm5C_associated_SNPs_48438 0 0 1 SND1 POSTAR2 ENCODE chrX:30237226-30237296
64251 chr10 104392069 104392069 1 + C T rs181690906 104392069 + 104392049 104392089 41 TCTGGGGGAGCAGGGTAAGGCAGGAGGAAGTGGGTGAGCTC TCTGGGGGAGCAGGGTAAGGTAGGAGGAAGTGGGTGAGCTC Direct Loss 0.960240211220427 0 0.90075177 0.90058887 prediction 0.920480422440854 Functional Loss - SUFU ENSG00000107882 UTR3 Human protein_coding chr10:104392069 chr10:104392069 . . 0 21 hm5C_associated_SNPs_48447 1 0 1 UPF1 POSTAR2 ENCODE chr10:104392021-104392070
64251 chr9 96438029 96438029 1 + C T STAD 96438029 + 96438009 96438049 41 GGTACACGGGTGGCTTCCATCGAGACCGGGCTGGCGGCTGC GGTACACGGGTGGCTTCCATTGAGACCGGGCTGGCGGCTGC Direct Loss 0.960235871031175 0 0.91880834 0.7594747 prediction 0.92047174206235 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96438029 chr9:96438029 synonymous SNV . 0 21 hm5C_associated_SNPs_48449 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:96438021-96438059
64251 chr10 17271484 17271484 1 - G A SKCM 17271484 - 17271464 17271504 41 CGGCTGGAGCTCGGCCGGCTCGCGGTGCCCGGGCCGCCGAA CGGCTGGAGCTCGGCCGGCTTGCGGTGCCCGGGCCGCCGAA Direct Loss 0.960190313819487 0 0.88845855 0.8418256 prediction 0.920380627638973 Functional Loss - VIM ENSG00000026025 CDS Human protein_coding chr10:17271484 chr10:17271484 synonymous SNV . 0 21 hm5C_associated_SNPs_48456 0 0 1 EWSR1 POSTAR2 ENCODE chr10:17271476-17271502
64251 chr15 45879699 45879699 1 + C A UCEC 45879699 + 45879679 45879719 41 TGACACGGCCACCCTACTGCCTGGAGGCCGGGGAGCCGACG TGACACGGCCACCCTACTGCATGGAGGCCGGGGAGCCGACG Direct Loss 0.960186750790382 0 0.66525745 0.6487917 prediction 0.920373501580764 Functional Loss - BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45879699 chr15:45879699 nonsynonymous SNV 0.053 1 21 hm5C_associated_SNPs_48457 0 0 4 DDX3X POSTAR2 ENCODE chr15:45879651-45879723
64251 chr1 156594436 156594436 1 + C A LUSC 156594436 + 156594416 156594456 41 TGTAACGCGGGCTGGCTGCTCGAGGGCTCCGTGCGCTACCC TGTAACGCGGGCTGGCTGCTAGAGGGCTCCGTGCGCTACCC Direct Loss 0.960128012905199 0 0.90910363 0.8075156 prediction 0.920256025810399 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594436 chr1:156594436 synonymous SNV . 0 21 hm5C_associated_SNPs_48463 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr16 28507373 28507373 1 + C T LUSC 28507373 + 28507353 28507393 41 GCCTCGGGAGGGGAGGAGGCCGGGATAGCCTCAGGCGGGGA GCCTCGGGAGGGGAGGAGGCTGGGATAGCCTCAGGCGGGGA Direct Loss 0.960122471126063 0 0.8953401 0.8897207 prediction 0.920244942252126 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507373 chr16:28507373 synonymous SNV . 0 21 hm5C_associated_SNPs_48464 0 0 1 GTF2F1 POSTAR2 ENCODE chr16:28507336-28507453
64251 chr15 64426932 64426932 1 + C T CESC 64426932 + 64426912 64426952 41 AAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTG AAGCCACACTGCAGAAGAAGTGGGAGGCCGAGGCTCGGCTG Direct Loss 0.960116099518747 0 0.94016707 0.933863 prediction 0.920232199037495 Functional Loss - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64426932 chr15:64426932 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_48466 0 0 9 BUD13 POSTAR2 ENCODE chr15:64426930-64427047
64251 chr4 3495341 3495341 1 + C G rs549711473 3495341 + 3495321 3495361 41 CTGTGTTCTGTGGGAGGGACCGGGGGTCTCCCGGAGAGGGG CTGTGTTCTGTGGGAGGGACGGGGGGTCTCCCGGAGAGGGG Direct Loss 0.960062790212823 0 0.9323253 0.9212084 prediction 0.920125580425645 Functional Loss - DOK7 ENSG00000175920 UTR3 Human protein_coding chr4:3495341 chr4:3495341 . . 0 21 hm5C_associated_SNPs_48471 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:3495318-3495346
64251 chr1 1447693 1447693 1 + C T rs541906634 1447693 + 1447673 1447713 41 AAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTT AAGGGCCCCAAGGGTGAAGGTGCGGGGCCGCCGCCGCCTTT Direct Loss 0.960022297088157 0 0.90658 0.82668686 prediction 0.920044594176314 Functional Loss - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1447693 chr1:1447693 synonymous SNV . 0 21 hm5C_associated_SNPs_48474 0 0 1 LIN28B POSTAR2 ENCODE chr1:1447643-1447722
64251 chr16 68772218 68772218 1 + C T BRCA 68772218 + 68772198 68772238 41 AGGTCTCCTCTTGGCTCTGCCAGGAGCCGGAGCCCTGCCAC AGGTCTCCTCTTGGCTCTGCTAGGAGCCGGAGCCCTGCCAC Direct Loss 0.960008924777461 0 0.9262074 0.9086274 prediction 0.920017849554923 Functional Loss - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68772218 chr16:68772218 stopgain 0.645 0 21 hm5C_associated_SNPs_48476 0 0 1 DDX3X POSTAR2 ENCODE chr16:68772199-68772234
64251 chr16 19127313 19127313 1 + C T KIRC 19127313 + 19127293 19127333 41 CCCCAGCTTCTCCGGGCCTACGGGGGTCCCCGCTACCTTGC CCCCAGCTTCTCCGGGCCTATGGGGGTCCCCGCTACCTTGC Direct Loss 0.959988727566583 0 0.93048346 0.91175056 prediction 0.919977455133166 Functional Loss - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19127313 chr16:19127313 synonymous SNV . 0 21 hm5C_associated_SNPs_48477 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:19127283-19127323
64251 chr3 52828887 52828887 1 + C T rs528961799 52828887 + 52828867 52828907 41 CTTGGCAGCCTCTGGCTTCCCGAGAAGCCCCTTTCGGCTGC CTTGGCAGCCTCTGGCTTCCTGAGAAGCCCCTTTCGGCTGC Direct Loss 0.959970200436658 0 0.8497339 0.6083288 prediction 0.919940400873316 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52828887 chr3:52828887 nonsynonymous SNV 0.143 0 21 hm5C_associated_SNPs_48479 0 0 3 DDX3X POSTAR2 ENCODE chr3:52828842-52828913
64251 chr4 186064443 186064443 1 + C A rs183128370 186064443 + 186064423 186064463 41 CCCCTAGCGTCGCGCAGGGTCGGGGACTGCGCGGCGGTGCC CCCCTAGCGTCGCGCAGGGTAGGGGACTGCGCGGCGGTGCC Direct Loss 0.959909740382968 0 0.91533744 0.90057623 prediction 0.919819480765935 Functional Loss - SLC25A4 ENSG00000151729 UTR5 Human protein_coding chr4:186064443 chr4:186064443 . . 0 21 hm5C_associated_SNPs_48484 1 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr4:186064440-186064460
64251 chr16 103923 103923 1 + C G rs2562145 103923 + 103903 103943 41 GCCCTGGAGGAGACGGAGGCCGCGGGTGGGCCCGAGGCGCA GCCCTGGAGGAGACGGAGGCGGCGGGTGGGCCCGAGGCGCA Direct Loss 0.959869754876689 0 0.8977585 0.9083965 prediction 0.919739509753378 Functional Loss - SNRNP25 ENSG00000161981 UTR5 Human protein_coding chr16:103923 chr16:103923 . . 0 21 hm5C_associated_SNPs_48487 0 0 16 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr16:103912-103933
64251 chr19 36616653 36616653 1 + C A LUSC 36616653 + 36616633 36616673 41 CGTGACGGTGGGGGACTTCCCGGAGGAGGACTACGGGTTGG CGTGACGGTGGGGGACTTCCAGGAGGAGGACTACGGGTTGG Direct Loss 0.959857839296254 0 0.9287205 0.90327895 prediction 0.919715678592507 Functional Loss - TBCB ENSG00000105254 CDS Human protein_coding chr19:36616653 chr19:36616653 nonsynonymous SNV 0.755 5 21 hm5C_associated_SNPs_48488 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:36616619-36616809
64251 chr20 34828396 34828396 1 + C T rs149423857 34828396 + 34828376 34828416 41 CCAGAGATGAAGCCCAGAGCCGGGACAGAGATCCGCTTCTC CCAGAGATGAAGCCCAGAGCTGGGACAGAGATCCGCTTCTC Direct Loss 0.959836480105766 0 0.8616395 0.40398696 prediction 0.919672960211532 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828396 chr20:34828396 synonymous SNV . 0 21 hm5C_associated_SNPs_48489 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:34828392-34828418
64251 chr6 2766012 2766012 1 + C T rs200851664 2766012 + 2765992 2766032 41 GGGCACGCGGAGCCCGCGGCCGGGTCGCACCGCGCCGGGGA GGGCACGCGGAGCCCGCGGCTGGGTCGCACCGCGCCGGGGA Direct Loss 0.95982853085164 0 0.9245298 0.9120204 prediction 0.91965706170328 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2766012 chr6:2766012 synonymous SNV . 0 21 hm5C_associated_SNPs_48490 0 0 1 DDX3X POSTAR2 ENCODE chr6:2765981-2766064
64251 chr3 16343237 16343237 1 + C T COAD 16343237 + 16343217 16343257 41 GTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTC GTGTTGATTGCAGGAGGAGTTGGAATTAACCCTCTGCTTTC Direct Loss 0.959816722292023 0 0.90560335 0.49268582 prediction 0.919633444584045 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343237 chr3:16343237 synonymous SNV . 0 21 hm5C_associated_SNPs_48493 0 0 1 PPIG POSTAR2 ENCODE chr3:16343138-16343259
64251 chr8 38065106 38065106 1 + C G BLCA 38065106 + 38065086 38065126 41 GGCAAATACTGCCTCATACTCAGGGGCTTATTATGCACCTG GGCAAATACTGCCTCATACTGAGGGGCTTATTATGCACCTG Direct Loss 0.959813917071012 0 0.9706514 0.948802 prediction 0.919627834142025 Functional Loss - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38065106 chr8:38065106 stopgain 0.997 0 21 hm5C_associated_SNPs_48494 0 0 4 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:38065096-38065137
64251 chrX 129546565 129546565 1 + C A COAD 129546565 + 129546545 129546585 41 ACTCTGGTGGAGCAGAGGACCTAGAGAGGGAGCTGAAGAAG ACTCTGGTGGAGCAGAGGACATAGAGAGGGAGCTGAAGAAG Direct Loss 0.959777219657985 0 0.44622222 0.37017435 prediction 0.91955443931597 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546565 chrX:129546565 nonsynonymous SNV 0.010 0 21 hm5C_associated_SNPs_48496 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:129546530-129546577
64251 chr14 59951446 59951446 1 + C T rs80087397 59951446 + 59951426 59951466 41 GCCCCTTGACCCCGCCCGCCCTCGGGCCGGGCTCCGCACTC GCCCCTTGACCCCGCCCGCCTTCGGGCCGGGCTCCGCACTC Direct Loss 0.959719523210388 0 0.21408701 0.45833555 prediction 0.919439046420776 Functional Loss - JKAMP ENSG00000258782 ncRNA_intronic Human processed_transcript chr14:59951446 chr14:59951446 . . 0 21 hm5C_associated_SNPs_48500 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585669 chr14:59951440-59951460
64251 chr11 2424541 2424541 1 + C G rs2234279 2424541 + 2424521 2424561 41 CGAGGGGTCGAAGCCAGACACGAGAGGAAGAGGGTCCTGGG CGAGGGGTCGAAGCCAGACAGGAGAGGAAGAGGGTCCTGGG Direct Loss 0.959701786472749 0 0.88772786 0.54450905 prediction 0.919403572945498 Functional Loss - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424541 chr11:2424541 nonsynonymous SNV 0.011 0 21 hm5C_associated_SNPs_48502 0 0 1 SLTM POSTAR2 ENCODE chr11:2424531-2424646
64251 chr17 78210832 78210832 1 + C A UCEC 78210832 + 78210812 78210852 41 GGAGACAGCTGAGGGGCTCCCTCCAGTCCGGATCCCGCCCT GGAGACAGCTGAGGGGCTCCATCCAGTCCGGATCCCGCCCT Direct Loss 0.959690295388649 0 0.96435654 0.4963187 prediction 0.919380590777299 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78210832 chr17:78210832 nonsynonymous SNV 0.796 5 21 hm5C_associated_SNPs_48503 0 0 1 PPIG POSTAR2 ENCODE chr17:78210807-78210884
64251 chr1 57378088 57378088 1 + C T DLBC 57378088 + 57378068 57378108 41 GCCCACAGATGCAGCCTATCCACGAGGTGCTGCGGCACACA GCCCACAGATGCAGCCTATCTACGAGGTGCTGCGGCACACA Direct Loss 0.959662019312632 0 0.6218725 0.75832295 prediction 0.919324038625265 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57378088 chr1:57378088 nonsynonymous SNV 0.011 1 21 hm5C_associated_SNPs_48509 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr1 234509333 234509333 1 + C G BLCA 234509333 + 234509313 234509353 41 GACCCTGCAGTGGCAGGACTCGGCACCGCGCCCTCCACCGC GACCCTGCAGTGGCAGGACTGGGCACCGCGCCCTCCACCGC Direct Loss 0.959602669592451 0 0.9069902 0.7929306 prediction 0.919205339184902 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234509333 chr1:234509333 nonsynonymous SNV 0.003 1 21 hm5C_associated_SNPs_48514 0 0 21 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:234509313-234509334
64251 chr7 79082417 79082417 1 + C T COAD 79082417 + 79082397 79082437 41 CCTGATGGTGAGCCCCGCCACGGGGGTCTCGTTCACCTCCA CCTGATGGTGAGCCCCGCCATGGGGGTCTCGTTCACCTCCA Direct Loss 0.959557581082333 0 0.9438541 0.89088476 prediction 0.919115162164665 Functional Loss - MAGI2 ENSG00000187391 CDS Human protein_coding chr7:79082417 chr7:79082417 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48520 0 0 1 DDX3X POSTAR2 ENCODE chr7:79082353-79082450
64251 chr11 64940257 64940257 1 + C A rs149911369 64940257 + 64940237 64940277 41 AGGTCCCTGTTCGCCTTCCCCGGGGCCCTGGCCTCTCGCCG AGGTCCCTGTTCGCCTTCCCAGGGGCCCTGGCCTCTCGCCG Direct Loss 0.959545482710299 0 0.93810976 0.9273218 prediction 0.919090965420598 Functional Loss - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64940257 chr11:64940257 synonymous SNV . 0 21 hm5C_associated_SNPs_48521 0 0 1 IGF2BP2 POSTAR2 ENCODE chr11:64940256-64940311
64251 chr12 7045116 7045116 1 + C G BLCA 7045116 + 7045096 7045136 41 GGGCACTGGTGGAGTTTTGTCTGGACCCCCAATGGGTCCCA GGGCACTGGTGGAGTTTTGTGTGGACCCCCAATGGGTCCCA Direct Loss 0.959505882740403 0 0.41125622 0.33442664 prediction 0.919011765480807 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045116 chr12:7045116 nonsynonymous SNV 0.927 2 21 hm5C_associated_SNPs_48527 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7045061-7045135
64251 chr22 50962640 50962640 1 - G A GBM 50962640 - 50962620 50962660 41 CTGCTGATCACAGGCCTGTTCGGGGCTGGACTCGGTGGGGC CTGCTGATCACAGGCCTGTTTGGGGCTGGACTCGGTGGGGC Direct Loss 0.959497687106758 0 0.93562067 0.8839673 prediction 0.918995374213516 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962640 chr22:50962640 synonymous SNV . 0 21 hm5C_associated_SNPs_48529 4 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50962606-50962647
64251 chr17 48944210 48944210 1 + C T rs556311785 48944210 + 48944190 48944230 41 CCCAGAAAGTGCCCTCTCCGCGGGGGTCTGCGGCCAAGGAG CCCAGAAAGTGCCCTCTCCGTGGGGGTCTGCGGCCAAGGAG Direct Loss 0.959463749218495 0 0.8940836 0.5934673 prediction 0.91892749843699 Functional Loss - TOB1-AS1 ENSG00000229980 ncRNA_exonic Human processed_transcript chr17:48944210 chr17:48944210 . . 0 21 hm5C_associated_SNPs_48533 0 0 1 NCBP2 POSTAR2 ENCODE chr17:48944135-48944251
64251 chr2 233740979 233740979 1 + C G HNSC 233740979 + 233740959 233740999 41 TCGCTGGGGCCCGGCGCTATCGCGGCCATCGTGATCGCCGC TCGCTGGGGCCCGGCGCTATGGCGGCCATCGTGATCGCCGC Direct Loss 0.959462561281987 0 0.9344821 0.87910855 prediction 0.918925122563975 Functional Loss - C2orf82 ENSG00000182600 CDS Human protein_coding chr2:233740979 chr2:233740979 nonsynonymous SNV 0.958 3 21 hm5C_associated_SNPs_48534 0 0 9 DDX3X POSTAR2 ENCODE chr2:233740956-233740982
64251 chr16 28909674 28909674 1 + C T ESCA 28909674 + 28909654 28909694 41 TCAAGGAGTGGGGCACTGGCCGGGACACCCTGCGCTGCTTG TCAAGGAGTGGGGCACTGGCTGGGACACCCTGCGCTGCTTG Direct Loss 0.9594539462473 0 0.9220687 0.89051026 prediction 0.9189078924946 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28909674 chr16:28909674 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_48535 0 0 2 BUD13 POSTAR2 ENCODE chr16:28909668-28909697
64251 chr10 64564934 64564934 1 + C G rs10995311 64564934 + 64564914 64564954 41 ATCGCGACGCGGCTTCTGGCCCGGAGGCGCCGATGCAGCCG ATCGCGACGCGGCTTCTGGCGCGGAGGCGCCGATGCAGCCG Direct Loss 0.959441839032229 0 0.86088735 0.9096397 prediction 0.918883678064458 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64564934 chr10:64564934 nonsynonymous SNV 0.800 0 21 hm5C_associated_SNPs_48537 0 1 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64564913-64565043
64251 chr19 11032986 11032986 1 + C T rs529371765 11032986 + 11032966 11033006 41 CCCTAGACTCAGAGGCGCCGCGGGGAGGGGTGGCCCCGCCG CCCTAGACTCAGAGGCGCCGTGGGGAGGGGTGGCCCCGCCG Direct Loss 0.959372936338973 0 0.90517664 0.89468443 prediction 0.918745872677946 Functional Loss - CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032986 chr19:11032986 . . 0 21 hm5C_associated_SNPs_48543 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032949-11033010
64251 chr9 34251665 34251665 1 + C T rs553917728 34251665 + 34251645 34251685 41 GGTCAGGTGTGGAGACTGCTCGCCAGTCTCTGTGAGCCTAG GGTCAGGTGTGGAGACTGCTTGCCAGTCTCTGTGAGCCTAG Direct Loss 0.959334424344641 0 0.33202413 0.105663866 prediction 0.918668848689283 Functional Loss - UBAP1 ENSG00000165006 UTR3 Human protein_coding chr9:34251665 chr9:34251665 . . 0 21 hm5C_associated_SNPs_48548 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:34251607-34251668
64251 chr14 89029403 89029403 1 + C T rs536567004 89029403 + 89029383 89029423 41 AGGCGGTGGTGTCCCGGCTGCGGGGTAGGAGTCCGCGGCAG AGGCGGTGGTGTCCCGGCTGTGGGGTAGGAGTCCGCGGCAG Direct Loss 0.959313789820836 0 0.91914284 0.9000385 prediction 0.918627579641672 Functional Loss - ZC3H14 ENSG00000100722 UTR5 Human protein_coding chr14:89029403 chr14:89029403 . . 0 21 hm5C_associated_SNPs_48549 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr14:89029385-89029410
64251 chr10 99330178 99330178 1 + C T rs557318746 99330178 + 99330158 99330198 41 TGGCAGCGGTGGTTCTTCTCCGGGAAGCTGCTCACAGACCG TGGCAGCGGTGGTTCTTCTCTGGGAAGCTGCTCACAGACCG Direct Loss 0.959294395240356 0 0.84283113 0.45513725 prediction 0.918588790480713 Functional Loss - UBTD1 ENSG00000165886 CDS Human protein_coding chr10:99330178 chr10:99330178 synonymous SNV . 0 21 hm5C_associated_SNPs_48550 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:99330146-99330192
64251 chr20 56140815 56140815 1 + C T UCEC 56140815 + 56140795 56140835 41 GCCGACCTCCCCTGTGAAATCGAGAGAGAGATCCTTGCCTT GCCGACCTCCCCTGTGAAATTGAGAGAGAGATCCTTGCCTT Direct Loss 0.959274897876169 0 0.8902345 0.57519907 prediction 0.918549795752339 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140815 chr20:56140815 synonymous SNV . 0 21 hm5C_associated_SNPs_48552 0 0 3 BUD13 POSTAR2 ENCODE chr20:56140773-56140827
64251 chr7 139102372 139102372 1 + C T UCEC 139102372 + 139102352 139102392 41 GATCCAAATCTCGGGAGAAACGCCATCGCCACAGGTCCCGC GATCCAAATCTCGGGAGAAATGCCATCGCCACAGGTCCCGC Direct Loss 0.959228638104912 0 0.29788548 0.36939162 prediction 0.918457276209824 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139102372 chr7:139102372 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_48555 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139102281-139102404
64251 chr2 139307793 139307793 1 + C T UCEC 139307793 + 139307773 139307813 41 ACAATAAAGTGGTGATGTCTCGGGAACCCACCCCACCTCTA ACAATAAAGTGGTGATGTCTTGGGAACCCACCCCACCTCTA Direct Loss 0.959213243262516 0 0.9524543 0.5628276 prediction 0.918426486525032 Functional Loss - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139307793 chr2:139307793 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_48556 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr2:139307774-139307794
64251 chr1 54432012 54432012 1 + C A THYM 54432012 + 54431992 54432032 41 GACTGCGGAAGCTGTGAAGCCACGGGAGACCTCGGAGCCTA GACTGCGGAAGCTGTGAAGCAACGGGAGACCTCGGAGCCTA Direct Loss 0.959166216790094 0 0.85189617 0.7738373 prediction 0.918332433580187 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54432012 chr1:54432012 nonsynonymous SNV 0.006 0 21 hm5C_associated_SNPs_48562 0 0 4 DGCR8 POSTAR2 ENCODE chr1:54432010-54432036
64251 chr14 77844554 77844554 1 + C A LUSC 77844554 + 77844534 77844574 41 AGCAGGCTAGACTGGAATTTCTGGAGAAGGAACCAAGAAAG AGCAGGCTAGACTGGAATTTATGGAGAAGGAACCAAGAAAG Direct Loss 0.95916515101425 0 0.30500817 0.2362971 prediction 0.918330302028499 Functional Loss - SAMD15 ENSG00000100583 CDS Human protein_coding chr14:77844554 chr14:77844554 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_48563 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:77844536-77844574
64251 chr19 56206250 56206250 1 + C A UCEC 56206250 + 56206230 56206270 41 GGAAGACGCCGGAGTCATTCCTGGGGCCCAATGCAGCCCTC GGAAGACGCCGGAGTCATTCATGGGGCCCAATGCAGCCCTC Direct Loss 0.95914683548942 0 0.91301835 0.91937864 prediction 0.918293670978841 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56206250 chr19:56206250 nonsynonymous SNV 0.954 3 21 hm5C_associated_SNPs_48564 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:56206219-56206262
64251 chr7 42977137 42977137 1 + C T rs142529352 42977137 + 42977117 42977157 41 AGGGCAAGAGGATCATTGAACGAGACAGAAAGCGACCATCC AGGGCAAGAGGATCATTGAATGAGACAGAAAGCGACCATCC Direct Loss 0.95909989154824 0 0.5006675 0.31503588 prediction 0.91819978309648 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42977137 chr7:42977137 stopgain 0.972 0 21 hm5C_associated_SNPs_48568 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:42977094-42977167
64251 chr2 11300785 11300785 1 + C T STAD 11300785 + 11300765 11300805 41 CTCTGTATCTTTCATTTTAACGGGAACGTGAAGCAGGCCAC CTCTGTATCTTTCATTTTAATGGGAACGTGAAGCAGGCCAC Direct Loss 0.959054934236366 0 0.8678481 0.34971392 prediction 0.918109868472732 Functional Loss - PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300785 chr2:11300785 synonymous SNV . 0 21 hm5C_associated_SNPs_48576 0 0 1 YBX3 POSTAR2 ENCODE chr2:11300756-11300821
64251 chr16 2009583 2009583 1 + C A rs191861939 2009583 + 2009563 2009603 41 ACCCGGACGGAGGTAGAGGCCAGGGCAGCGCGTCCGGGAGC ACCCGGACGGAGGTAGAGGCAAGGGCAGCGCGTCCGGGAGC Direct Loss 0.959001806189275 0 0.8855019 0.85410035 prediction 0.91800361237855 Functional Loss - NDUFB10 ENSG00000140990 UTR5 Human protein_coding chr16:2009583 chr16:2009583 . . 0 21 hm5C_associated_SNPs_48585 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr16:2009540-2009680
64251 chr1 32052520 32052520 1 + C T UCEC 32052520 + 32052500 32052540 41 GGCGTCAATGAGTGCGACATCGAGAGCTTCGTGCTGGGCGT GGCGTCAATGAGTGCGACATTGAGAGCTTCGTGCTGGGCGT Direct Loss 0.958968367799903 0 0.8343508 0.6909677 prediction 0.917936735599806 Functional Loss - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32052520 chr1:32052520 synonymous SNV . 0 21 hm5C_associated_SNPs_48587 0 0 1 PPIG POSTAR2 ENCODE chr1:32052518-32052567
64251 chr3 44686087 44686087 1 + C T rs9865162 44686087 + 44686067 44686107 41 GTTGCAGTGAGCCAGGATCGCGCCATTGCACTCCAGCCTGG GTTGCAGTGAGCCAGGATCGTGCCATTGCACTCCAGCCTGG Direct Loss 0.958938132743805 0 0.71717995 0.6643802 prediction 0.91787626548761 Functional Loss - ZNF197;ZNF660-ZNF197 ENSG00000236869 ncRNA_intronic Human antisense chr3:44686087 chr3:44686087 . . 0 21 hm5C_associated_SNPs_48590 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:44686082-44686132
64251 chr1 179051362 179051362 1 + C T rs368872192 179051362 + 179051342 179051382 41 TCCAGGCCGTGGGAGGGAACCGACGAGCCGGGCTCGGCCTG TCCAGGCCGTGGGAGGGAACTGACGAGCCGGGCTCGGCCTG Direct Loss 0.958897139652876 0 0.89684427 0.8980719 prediction 0.917794279305752 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179051362 chr1:179051362 synonymous SNV . 0 21 hm5C_associated_SNPs_48594 0 0 7 DDX3X POSTAR2 ENCODE chr1:179051355-179051429
64251 chr22 21799889 21799889 1 + C T rs139749703 21799889 + 21799869 21799909 41 GGCTGCAGCAGCAGCACCAACGGGAGCAGCGGGGGCTGCGA GGCTGCAGCAGCAGCACCAATGGGAGCAGCGGGGGCTGCGA Direct Loss 0.958862997279096 0 0.9147774 0.88479275 prediction 0.917725994558193 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799889 chr22:21799889 synonymous SNV . 0 21 hm5C_associated_SNPs_48597 0 0 10 CSTF2T POSTAR2 ENCODE chr22:21799854-21799898
64251 chr1 150477121 150477121 1 + C A UCEC 150477121 + 150477101 150477141 41 TTTCAAGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTCATT TTTCAAGGCAGGCGGGTGCCATGGAGCGTCCAGTCCTCATT Direct Loss 0.958856695221653 0 0.84497607 0.63746977 prediction 0.917713390443306 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150477121 chr1:150477121 nonsynonymous SNV 0.186 0 21 hm5C_associated_SNPs_48598 0 0 1 U2AF2 POSTAR2 ENCODE chr1:150477092-150477150
64251 chr11 66366699 66366699 1 + C G CESC 66366699 + 66366679 66366719 41 ACGGGGCGGCAGGCGGTACTCAAGGGCATGGGCAGCGGCCA ACGGGGCGGCAGGCGGTACTGAAGGGCATGGGCAGCGGCCA Direct Loss 0.958851535600897 0 0.90298325 0.8808086 prediction 0.917703071201794 Functional Loss - CCS ENSG00000173992 CDS Human protein_coding chr11:66366699 chr11:66366699 synonymous SNV . 0 21 hm5C_associated_SNPs_48599 0 0 5 DDX24 POSTAR2 ENCODE chr11:66366671-66366726
64251 chr17 61895420 61895420 1 + C T BRCA 61895420 + 61895400 61895440 41 GTCACGGAGAGACTGGCAATCGGCATAGCGATAGTCCACGT GTCACGGAGAGACTGGCAATTGGCATAGCGATAGTCCACGT Direct Loss 0.958832872809391 0 0.74773794 0.21805772 prediction 0.917665745618782 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61895420 chr17:61895420 nonsynonymous SNV 0.993 3 21 hm5C_associated_SNPs_48600 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:61895364-61895442
64251 chr17 41570223 41570223 1 + C T OV 41570223 + 41570203 41570243 41 TCTAGATATCGGTCCAGGAGCAGGAGTCAGAGTCCCCCCAA TCTAGATATCGGTCCAGGAGTAGGAGTCAGAGTCCCCCCAA Direct Loss 0.958815514497118 0 0.88666654 0.44244868 prediction 0.917631028994237 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570223 chr17:41570223 synonymous SNV . 0 21 hm5C_associated_SNPs_48602 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570193-41570223
64251 chr1 220267580 220267580 1 + C T BLCA 220267580 + 220267560 220267600 41 TGCGTTGGGGGCTGCGCCCTCGCGGGCCGGGCGCGGCCGCC TGCGTTGGGGGCTGCGCCCTTGCGGGCCGGGCGCGGCCGCC Direct Loss 0.958798585772726 0 0.8941289 0.68401074 prediction 0.917597171545452 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220267580 chr1:220267580 nonsynonymous SNV 0.285 0 21 hm5C_associated_SNPs_48604 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:220267520-220267580
64251 chr22 35815961 35815961 1 + C T COAD 35815961 + 35815941 35815981 41 CGGAGCGGGGCCCGTCAGCACGAGAGGGACAGTGACCGCCG CGGAGCGGGGCCCGTCAGCATGAGAGGGACAGTGACCGCCG Direct Loss 0.958785210803823 0 0.8971424 0.81053543 prediction 0.917570421607647 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35815961 chr22:35815961 synonymous SNV . 0 21 hm5C_associated_SNPs_48606 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:35815937-35815962
64251 chr6 3224994 3224994 1 - G A COAD 3224994 - 3224974 3225014 41 GAGGAGGAGGAGGGCGAGGACGAGGCGTAGATGCCCCCGCG GAGGAGGAGGAGGGCGAGGATGAGGCGTAGATGCCCCCGCG Direct Loss 0.958773641859828 0 0.9044007 0.9015345 prediction 0.917547283719656 Functional Loss - TUBB2B ENSG00000137285 CDS Human protein_coding chr6:3224994 chr6:3224994 synonymous SNV . 0 21 hm5C_associated_SNPs_48607 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:3224994-3224995
64251 chr2 15732011 15732011 1 + C A rs199677503 15732011 + 15731991 15732031 41 CACTGCCACGCCGTGTCAGTCGGGAGGGAGGGAGCGAGCAG CACTGCCACGCCGTGTCAGTAGGGAGGGAGGGAGCGAGCAG Direct Loss 0.958771515623336 0 0.92572856 0.907808 prediction 0.917543031246673 Functional Loss - DDX1 ENSG00000079785 UTR5 Human protein_coding chr2:15732011 chr2:15732011 . . 0 21 hm5C_associated_SNPs_48609 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:15732000-15732020
64251 chr7 106508577 106508577 1 + C A LUSC 106508577 + 106508557 106508597 41 GCATGGCGGAGGTGGCCAGCCGCGACCCCAAGCTCTACGCC GCATGGCGGAGGTGGCCAGCAGCGACCCCAAGCTCTACGCC Direct Loss 0.958759502922523 0 0.43665993 0.36462379 prediction 0.917519005845046 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508577 chr7:106508577 nonsynonymous SNV 0.096 2 21 hm5C_associated_SNPs_48611 0 0 5 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr13 114193755 114193755 1 + C T UCEC 114193755 + 114193735 114193775 41 TCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCTCCAT TCTCAGGGCCCCGTGGTCACTGAGGAGATCGCCACCTCCAT Direct Loss 0.958705781586358 0 0.9222038 0.9144883 prediction 0.917411563172717 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114193755 chr13:114193755 synonymous SNV . 0 21 hm5C_associated_SNPs_48615 0 0 1 SRSF1 POSTAR2 ENCODE chr13:114193662-114193795
64251 chr19 5828164 5828164 1 + C T MESO 5828164 + 5828144 5828184 41 CGGTGCACGAGCTGTCGGCGCGCGAGTGCGCCTGCGTGTGA CGGTGCACGAGCTGTCGGCGTGCGAGTGCGCCTGCGTGTGA Direct Loss 0.958702382939968 0 0.663176 0.42803216 prediction 0.917404765879937 Functional Loss - NRTN ENSG00000171119 CDS Human protein_coding chr19:5828164 chr19:5828164 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_48616 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5828152-5828174
64251 chr20 61273845 61273845 1 + C A rs530768092 61273845 + 61273825 61273865 41 ATGAAGCGGCGCGTGGCTGCCGGGGAGGCCAGAGCGTGGAG ATGAAGCGGCGCGTGGCTGCAGGGGAGGCCAGAGCGTGGAG Direct Loss 0.958657300848247 0 0.9172805 0.89856327 prediction 0.917314601696493 Functional Loss - SLCO4A1 ENSG00000101187 UTR5 Human protein_coding chr20:61273845 chr20:61273845 . . 0 21 hm5C_associated_SNPs_48620 0 0 5 DDX3X POSTAR2 ENCODE chr20:61273834-61273905
64251 chr16 843165 843165 1 + C T COAD 843165 + 843145 843185 41 TCCTGTACAGCCGGGGCCAGCGGGAGCTGAGCGTGCGGGAC TCCTGTACAGCCGGGGCCAGTGGGAGCTGAGCGTGCGGGAC Direct Loss 0.958656041904082 0 0.9199438 0.8996029 prediction 0.917312083808163 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:843165 chr16:843165 nonsynonymous SNV 0.198 1 21 hm5C_associated_SNPs_48621 0 0 5 DDX24 POSTAR2 ENCODE chr16:843143-843168
64251 chr13 27998816 27998816 1 + C T rs185665072 27998816 + 27998796 27998836 41 GGGCCGGGCGCGCCGGTTCCCGGCACGTGTCTCGGCACGTG GGGCCGGGCGCGCCGGTTCCTGGCACGTGTCTCGGCACGTG Direct Loss 0.958625244276156 0 0.8803742 0.86125976 prediction 0.917250488552312 Functional Loss - GTF3A ENSG00000122034 UTR5 Human protein_coding chr13:27998816 chr13:27998816 . 0.000 0 21 hm5C_associated_SNPs_48625 0 0 5 DDX3X POSTAR2 ENCODE chr13:27998769-27998839
64251 chr5 159437650 159437650 1 + C A HNSC 159437650 + 159437630 159437670 41 CAGTTCCTGATCCCAAAAATCAGCATTCCCAGAGTAAGCTG CAGTTCCTGATCCCAAAAATAAGCATTCCCAGAGTAAGCTG Direct Loss 0.958613747406579 0 0.15364322 0.2043997 prediction 0.917227494813159 Functional Loss - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437650 chr5:159437650 nonsynonymous SNV 0.094 0 21 hm5C_associated_SNPs_48626 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:159437618-159437651
64251 chr1 109241848 109241848 1 + C T GBM 109241848 + 109241828 109241868 41 CAAGAAGTAGAAGTCATCATCGGGAGGGCCATGGGTCTTCT CAAGAAGTAGAAGTCATCATTGGGAGGGCCATGGGTCTTCT Direct Loss 0.958593039745361 0 0.9308535 0.89761126 prediction 0.917186079490722 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241848 chr1:109241848 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_48630 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:109241832-109241870
64251 chr16 30594036 30594036 1 - G T TGCT 30594036 - 30594016 30594056 41 GCTTCAAGCGCAAGACCGCCCTGGAAGCCCATCGGTGGATC GCTTCAAGCGCAAGACCGCCATGGAAGCCCATCGGTGGATC Direct Loss 0.958571181216424 0 0.3840354 0.18672627 prediction 0.917142362432848 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594036 chr16:30594036 nonsynonymous SNV 0.009 2 21 hm5C_associated_SNPs_48633 0 0 1 RBM15 POSTAR2 ENCODE chr16:30594033-30594068
64251 chr19 10398421 10398421 1 + C A MESO 10398421 + 10398401 10398441 41 ACGAGTTTGCTGCTGGACCCCGCGACTTCTGGCAGCCCGTG ACGAGTTTGCTGCTGGACCCAGCGACTTCTGGCAGCCCGTG Direct Loss 0.958567927417889 0 0.16484383 0.32303762 prediction 0.917135854835778 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398421 chr19:10398421 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48634 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:10398396-10398422
64251 chr12 67663389 67663389 1 + C G rs527636310 67663389 + 67663369 67663409 41 TCGCGCTGCGACCCTGGAAGCGGGAGCCGCCGCGAGCGAGA TCGCGCTGCGACCCTGGAAGGGGGAGCCGCCGCGAGCGAGA Direct Loss 0.958545668768215 0 0.9263208 0.89483875 prediction 0.91709133753643 Functional Loss - CAND1 ENSG00000111530 UTR5 Human protein_coding chr12:67663389 chr12:67663389 . . 0 21 hm5C_associated_SNPs_48637 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:67663389-67663390
64251 chr16 2871110 2871110 1 + C T COAD 2871110 + 2871090 2871130 41 GGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCAC GGCGGGAAGGATGCCTGCTTTGTGAGTGTCCTTGCCACCAC Direct Loss 0.958531220118763 0 0.45330283 0.4274261 prediction 0.917062440237525 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2871110 chr16:2871110 synonymous SNV . 0 21 hm5C_associated_SNPs_48639 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:2871086-2871110
64251 chr6 5004171 5004171 1 - G A CESC 5004171 - 5004151 5004191 41 GTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCA GTTTGCGAGAAATCCAACTTTGGCAACCACAAGTCGCGCCA Direct Loss 0.958529084265638 0 0.61901146 0.62693876 prediction 0.917058168531276 Functional Loss - RPP40 ENSG00000124787 CDS Human protein_coding chr6:5004171 chr6:5004171 synonymous SNV . 0 21 hm5C_associated_SNPs_48640 0 0 4 DDX3X POSTAR2 ENCODE chr6:5004116-5004282
64251 chr10 94352911 94352911 1 + C G rs149291890 94352911 + 94352891 94352931 41 TCTGGGGATTCGGGCGGAGACGAGATTAGTGATTTGGCGGC TCTGGGGATTCGGGCGGAGAGGAGATTAGTGATTTGGCGGC Direct Loss 0.958514604474146 0 0.9024297 0.8747919 prediction 0.917029208948293 Functional Loss - KIF11 ENSG00000138160 upstream Human protein_coding chr10:94352911 chr10:94352911 . . 0 21 hm5C_associated_SNPs_48644 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:94352883-94352949
64251 chr13 114150035 114150035 1 + C T BRCA 114150035 + 114150015 114150055 41 GGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGC GGGTGGCTGCCATGCAGAGCTGGCAGTGGGTCCGGGACAGC Direct Loss 0.958513545077262 0 0.73433584 0.37250102 prediction 0.917027090154524 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150035 chr13:114150035 nonsynonymous SNV 0.030 2 21 hm5C_associated_SNPs_48645 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114150006-114150036
64251 chr7 90042176 90042176 1 + C T rs17862175 90042176 + 90042156 90042196 41 GTGAAATGTGCCCGGTATGACGGGAGCAGTGACTGCCTGAT GTGAAATGTGCCCGGTATGATGGGAGCAGTGACTGCCTGAT Direct Loss 0.958507638720853 0 0.8380296 0.7667919 prediction 0.917015277441706 Functional Loss - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042176 chr7:90042176 synonymous SNV . 0 21 hm5C_associated_SNPs_48646 0 0 4 GRWD1 POSTAR2 ENCODE chr7:90042142-90042209
64251 chr6 21596141 21596141 1 + C G BLCA 21596141 + 21596121 21596161 41 CGAGGTGAGCGAGATGATCTCGGGAGACTGGCTCGAGTCCA CGAGGTGAGCGAGATGATCTGGGGAGACTGGCTCGAGTCCA Direct Loss 0.958494372360159 0 0.95927393 0.93951696 prediction 0.916988744720319 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21596141 chr6:21596141 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_48648 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:21596094-21596148
64251 chr1 160389022 160389022 1 + C T BRCA 160389022 + 160389002 160389042 41 CGGGAGGAGCTGGAGCCTTGCGGGACGGCCTGCGAGGGCCT CGGGAGGAGCTGGAGCCTTGTGGGACGGCCTGCGAGGGCCT Direct Loss 0.958487861302572 0 0.9134257 0.84756875 prediction 0.916975722605144 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160389022 chr1:160389022 synonymous SNV . 0 21 hm5C_associated_SNPs_48649 0 0 2 RBM15 POSTAR2 ENCODE chr1:160388954-160389060
64251 chr10 96447642 96447642 1 + C T SKCM 96447642 + 96447622 96447662 41 TGATCATGGAGAGGAGTTTTCTGGAAGAGGAAGTTTTCCAG TGATCATGGAGAGGAGTTTTTTGGAAGAGGAAGTTTTCCAG Direct Loss 0.958465935399798 0 0.79314816 0.8418108 prediction 0.916931870799596 Functional Loss - CYP2C18 ENSG00000108242 CDS Human protein_coding chr10:96447642 chr10:96447642 nonsynonymous SNV 0.933 3 21 hm5C_associated_SNPs_48652 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:96447621-96447653
64251 chr1 200868717 200868717 1 + C T rs552128674 200868717 + 200868697 200868737 41 AGCTGAGGAGACTCTGCCTTCGGGAAGCGGTGAGGCCCCAG AGCTGAGGAGACTCTGCCTTTGGGAAGCGGTGAGGCCCCAG Direct Loss 0.958415472149121 0 0.8770673 0.7934631 prediction 0.916830944298242 Functional Loss - C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200868717 chr1:200868717 nonsynonymous SNV 0.978 4 21 hm5C_associated_SNPs_48656 0 0 7 BUD13 POSTAR2 ENCODE chr1:200868708-200868762
64251 chr11 2416744 2416744 1 + C T rs146021958 2416744 + 2416724 2416764 41 GCTGTGGTGAAGACCTTCCACGAGACGGTGCGGCCCCGGGG GCTGTGGTGAAGACCTTCCATGAGACGGTGCGGCCCCGGGG Direct Loss 0.958386715980672 0 0.24186513 0.10780978 prediction 0.916773431961343 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2416744 chr11:2416744 synonymous SNV . 0 21 hm5C_associated_SNPs_48659 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:2416709-2416744
64251 chr6 44120386 44120386 1 + C T SKCM 44120386 + 44120366 44120406 41 GCCTGGATGATGTGCGTCTTCACGGTGGTCATGACCTACAG GCCTGGATGATGTGCGTCTTTACGGTGGTCATGACCTACAG Direct Loss 0.958364744460137 0 0.39487922 0.42936727 prediction 0.916729488920273 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44120386 chr6:44120386 synonymous SNV . 0 21 hm5C_associated_SNPs_48661 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:44120371-44120395
64251 chr10 101556999 101556999 1 + C T COAD 101556999 + 101556979 101557019 41 CCAGGCGGGCACTCCAGAGACGGCAGGAGAAGAGCTCCCAG CCAGGCGGGCACTCCAGAGATGGCAGGAGAAGAGCTCCCAG Direct Loss 0.958353383031385 0 0.8910206 0.88283074 prediction 0.916706766062769 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101556999 chr10:101556999 nonsynonymous SNV 0.028 3 21 hm5C_associated_SNPs_48662 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:101556960-101557000
64251 chr11 65820149 65820149 1 + C T LUSC 65820149 + 65820129 65820169 41 TACTTTGCCCTGCAGGTAATCGCGAGGAGCTGGTGGAGCGG TACTTTGCCCTGCAGGTAATTGCGAGGAGCTGGTGGAGCGG Direct Loss 0.958347679029457 0 0.9075857 0.66817343 prediction 0.916695358058915 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65820149 chr11:65820149 nonsynonymous SNV 0.989 3 21 hm5C_associated_SNPs_48664 0 0 18 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65820140-65820160
64251 chr16 2512476 2512476 1 + C G rs555287901 2512476 + 2512456 2512496 41 AGGCGGAGGCGGGGCGCCTGCGGAAGGCCTGCTCGCTGCTG AGGCGGAGGCGGGGCGCCTGGGGAAGGCCTGCTCGCTGCTG Direct Loss 0.958334490390355 0 0.92586267 0.9186017 prediction 0.916668980780709 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2512476 chr16:2512476 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48667 0 0 2 PPIG POSTAR2 ENCODE chr16:2512423-2512513
64251 chr8 48921025 48921025 1 + C T LUAD 48921025 + 48921005 48921045 41 GCAGGAGAAGATGGCGGTCTCCACAGGTCGGTTCCCGGGCC GCAGGAGAAGATGGCGGTCTTCACAGGTCGGTTCCCGGGCC Direct Loss 0.958325102028005 0 0.86477995 0.80278397 prediction 0.916650204056009 Functional Loss - UBE2V2 ENSG00000169139 CDS Human protein_coding chr8:48921025 chr8:48921025 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_48668 0 0 1 DGCR8 POSTAR2 ENCODE chr8:48920999-48921031
64251 chr1 87797776 87797776 1 + C T TGCT 87797776 + 87797756 87797796 41 TGGAAGCGGTGCGCAGGCTGCGGGGGCAAGATTGCGGACCG TGGAAGCGGTGCGCAGGCTGTGGGGGCAAGATTGCGGACCG Direct Loss 0.958285970215323 0 0.935693 0.9093437 prediction 0.916571940430646 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87797776 chr1:87797776 synonymous SNV . 0 21 hm5C_associated_SNPs_48671 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:87797755-87797782
64251 chr15 76630126 76630126 1 + C T COAD 76630126 + 76630106 76630146 41 CCTTCCCCGGCAGAGAAGCCCGGGACGGCCATGTGCGTGGG CCTTCCCCGGCAGAGAAGCCTGGGACGGCCATGTGCGTGGG Direct Loss 0.958283585021346 0 0.9043125 0.8559566 prediction 0.916567170042691 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630126 chr15:76630126 synonymous SNV . 0 21 hm5C_associated_SNPs_48672 0 0 2 BUD13 POSTAR2 ENCODE chr15:76630061-76630183
64251 chr5 139781720 139781720 1 + C T BLCA 139781720 + 139781700 139781740 41 GCCGGGCCAGCGTCGGGAGTCGGCAGCAGCGGCGGCGGCGG GCCGGGCCAGCGTCGGGAGTTGGCAGCAGCGGCGGCGGCGG Direct Loss 0.958268376525287 0 0.9108557 0.8781717 prediction 0.916536753050573 Functional Loss - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139781720 chr5:139781720 synonymous SNV . 0 21 hm5C_associated_SNPs_48676 0 0 10 DDX24 POSTAR2 ENCODE chr5:139781682-139781726
64251 chr1 43166659 43166659 1 + C T LUSC 43166659 + 43166639 43166679 41 GCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGGGC GCTGAGAATTCGTCCGCTCCTGAGGCTGAGCAGGGCGGGGC Direct Loss 0.958261802733863 0 0.927819 0.8915492 prediction 0.916523605467726 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43166659 chr1:43166659 synonymous SNV . 0 21 hm5C_associated_SNPs_48677 0 0 37 UPF1 POSTAR2 GSE69586,GSM1704216 chr1:43166620-43166660
64251 chr15 40751214 40751214 1 + C A UCEC 40751214 + 40751194 40751234 41 AGGAGGAAGTCGGGACCTGTCTCCAGAGCCAGCACCCGATG AGGAGGAAGTCGGGACCTGTATCCAGAGCCAGCACCCGATG Direct Loss 0.958247514697297 0 0.9501362 0.57537544 prediction 0.916495029394594 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751214 chr15:40751214 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48679 0 0 1 RBM15 POSTAR2 ENCODE chr15:40751177-40751231
64251 chr5 177031312 177031312 1 + C T GBM 177031312 + 177031292 177031332 41 GGGGACGTGGCCCGGGCAGTCAGGGGACAAGGGCAGGAGAC GGGGACGTGGCCCGGGCAGTTAGGGGACAAGGGCAGGAGAC Direct Loss 0.958247499981613 0 0.94085425 0.91387355 prediction 0.916494999963225 Functional Loss - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177031312 chr5:177031312 synonymous SNV . 0 21 hm5C_associated_SNPs_48680 0 0 1 DDX3X POSTAR2 ENCODE chr5:177031231-177031312
64251 chr4 941568 941568 1 + C G rs148512239 941568 + 941548 941588 41 AGAGCAGGCACTGGATACACCGGGGGACTGCCCCCCAGGCA AGAGCAGGCACTGGATACACGGGGGGACTGCCCCCCAGGCA Direct Loss 0.958165920961486 0 0.9355941 0.92847854 prediction 0.916331841922972 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:941568 chr4:941568 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_48685 0 0 1 ZNF622 POSTAR2 ENCODE chr4:941549-941614
64251 chr20 30193226 30193226 1 + C G rs11545368 30193226 + 30193206 30193246 41 GGCAGCACCGCCACCGCCGCCGCGGGCCCCAGCTGCGCGCT GGCAGCACCGCCACCGCCGCGGCGGGCCCCAGCTGCGCGCT Direct Loss 0.958126231782517 0 0.89190936 0.88280106 prediction 0.916252463565034 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193226 chr20:30193226 synonymous SNV . 0 21 hm5C_associated_SNPs_48690 0 0 5 DDX24 POSTAR2 ENCODE chr20:30193133-30193233
64251 chr20 25199209 25199209 1 + C T COAD 25199209 + 25199189 25199229 41 CCTCGGGCTCGGGCTGATGTCGGCACGCCTGGCGATCCTGG CCTCGGGCTCGGGCTGATGTTGGCACGCCTGGCGATCCTGG Direct Loss 0.958124761841726 0 0.910556 0.7893491 prediction 0.916249523683451 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25199209 chr20:25199209 nonsynonymous SNV 0.951 3 21 hm5C_associated_SNPs_48691 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:25199179-25199212
64251 chr1 38261455 38261455 1 + C T STAD 38261455 + 38261435 38261475 41 CCTGGCATGGCTGATGATAACGGGGAGCCCTCAGATGACCT CCTGGCATGGCTGATGATAATGGGGAGCCCTCAGATGACCT Direct Loss 0.958119888621627 0 0.8861102 0.6206368 prediction 0.916239777243254 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38261455 chr1:38261455 nonsynonymous SNV 0.807 0 21 hm5C_associated_SNPs_48693 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:38261428-38261456
64251 chr20 36361374 36361374 1 + C T BRCA 36361374 + 36361354 36361394 41 CTCGAGAACGCGGCCGCTATCGGGAAGAAGAAATGACTGTG CTCGAGAACGCGGCCGCTATTGGGAAGAAGAAATGACTGTG Direct Loss 0.958110561932265 0 0.93251157 0.8897985 prediction 0.91622112386453 Functional Loss - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36361374 chr20:36361374 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_48696 0 0 12 SRSF1 POSTAR2 GSE83923,GSM2221667 chr20:36361360-36361380
64251 chr6 105406005 105406005 1 + C A LUSC 105406005 + 105405985 105406025 41 AAAGGTGGTGGAGAAGAGCCCGGGAAGCTGCCGGAGCCGGC AAAGGTGGTGGAGAAGAGCCAGGGAAGCTGCCGGAGCCGGC Direct Loss 0.957992279135463 0 0.8600671 0.87764204 prediction 0.915984558270926 Functional Loss - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105406005 chr6:105406005 synonymous SNV . 0 21 hm5C_associated_SNPs_48703 0 0 6 BUD13 POSTAR2 ENCODE chr6:105405964-105406039
64251 chr19 55593851 55593851 1 + C T UCEC 55593851 + 55593831 55593871 41 ACGTCGGGGGGGCCGGAGTTCGCGAGCAGTGTGCGGCGGCC ACGTCGGGGGGGCCGGAGTTTGCGAGCAGTGTGCGGCGGCC Direct Loss 0.957977098801732 0 0.7563412 0.8038298 prediction 0.915954197603463 Functional Loss - EPS8L1 ENSG00000131037 CDS Human protein_coding chr19:55593851 chr19:55593851 synonymous SNV . 0 21 hm5C_associated_SNPs_48704 0 0 1 GPKOW POSTAR2 ENCODE chr19:55593804-55593862
64251 chr1 87797878 87797878 1 + C A LUAD 87797878 + 87797858 87797898 41 CAGGCGCAGCTGGGCGACATCGGCACGTCCTGTTACACCAA CAGGCGCAGCTGGGCGACATAGGCACGTCCTGTTACACCAA Direct Loss 0.957975499557594 0 0.812232 0.4071712 prediction 0.915950999115189 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87797878 chr1:87797878 synonymous SNV . 0 21 hm5C_associated_SNPs_48705 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87797858-87797884
64251 chr17 80559729 80559729 1 + C T rs149691901 80559729 + 80559709 80559749 41 CAAGACTAGGCCTCAGGACGCGGGGGGAGCCATCCCCGCCG CAAGACTAGGCCTCAGGACGTGGGGGGAGCCATCCCCGCCG Direct Loss 0.957965768313497 0 0.9513935 0.93258166 prediction 0.915931536626994 Functional Loss - FOXK2 ENSG00000141568 UTR3 Human protein_coding chr17:80559729 chr17:80559729 . . 0 21 hm5C_associated_SNPs_48707 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:80559620-80559740
64251 chr11 94277535 94277535 1 + C T MESO 94277535 + 94277515 94277555 41 GGGCCCGCGGCCTTTGCATTCTGGGACCGCCCCCTTCCATT GGGCCCGCGGCCTTTGCATTTTGGGACCGCCCCCTTCCATT Direct Loss 0.957961954133056 0 0.86382926 0.69898367 prediction 0.915923908266111 Functional Loss - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94277535 chr11:94277535 nonsynonymous SNV 0.001 2 21 hm5C_associated_SNPs_48708 0 0 1 RBM15 POSTAR2 ENCODE chr11:94277484-94277577
64251 chr12 110341913 110341913 1 + C G rs140383594 110341913 + 110341893 110341933 41 AGAAGAATCCGGGAGCAGCACGGGAAGCTGAAATCAGCCAA AGAAGAATCCGGGAGCAGCAGGGGAAGCTGAAATCAGCCAA Direct Loss 0.957947204452951 0 0.8348043 0.9035873 prediction 0.915894408905902 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110341913 chr12:110341913 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_48712 0 0 4 PPIG POSTAR2 ENCODE chr12:110341865-110341938
64251 chr20 307308 307308 1 + C T CESC 307308 + 307288 307328 41 TGAAGAGGAGACGGTGGCGTCGGGGGAGGAGTCGCTGGGCT TGAAGAGGAGACGGTGGCGTTGGGGGAGGAGTCGCTGGGCT Direct Loss 0.957920853445058 0 0.93955755 0.9259359 prediction 0.915841706890116 Functional Loss - SOX12 ENSG00000177732 CDS Human protein_coding chr20:307308 chr20:307308 nonsynonymous SNV 0.983 2 21 hm5C_associated_SNPs_48713 0 0 3 EIF3H POSTAR2 ENCODE chr20:307243-307338
64251 chr12 72179446 72179446 1 + C T rs61754230 72179446 + 72179426 72179466 41 TGGTGGAGGGTGCTGTTCTTCTGGATAACTGTTCACGCCTA TGGTGGAGGGTGCTGTTCTTTTGGATAACTGTTCACGCCTA Direct Loss 0.957919988953672 0 0.40885073 0.3875435 prediction 0.915839977907345 Functional Loss - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72179446 chr12:72179446 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_48714 0 1 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:72179306-72179465
64251 chr9 129642636 129642636 1 + C T KICH 129642636 + 129642616 129642656 41 GGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAG GGTCCATGCTGAGCTGTTTCTGAGGAGGGCGTGCCCGCCAG Direct Loss 0.957911285000507 0 0.9162824 0.894863 prediction 0.915822570001015 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642636 chr9:129642636 stopgain 0.998 1 21 hm5C_associated_SNPs_48715 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:129642603-129642637
64251 chr4 186320890 186320890 1 - G A rs144479244 186320890 - 186320870 186320910 41 ACTGGTATTTTCTACACTTCCGAGACTCCGTTTCTGTCTGA ACTGGTATTTTCTACACTTCTGAGACTCCGTTTCTGTCTGA Direct Loss 0.957856161504542 0 0.43488464 0.21248114 prediction 0.915712323009083 Functional Loss - ANKRD37 ENSG00000186352 CDS Human protein_coding chr4:186320890 chr4:186320890 nonsynonymous SNV 0.433 0 21 hm5C_associated_SNPs_48719 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:186320824-186320900
64251 chr5 133727424 133727424 1 + C T rs181009937 133727424 + 133727404 133727444 41 AGCACTTTGGGAGGCAAAGGCGGGAGGATCACTTGAGGCCA AGCACTTTGGGAGGCAAAGGTGGGAGGATCACTTGAGGCCA Direct Loss 0.957841624312908 0 0.93803 0.9186985 prediction 0.915683248625816 Functional Loss - UBE2B ENSG00000119048 UTR3 Human protein_coding chr5:133727424 chr5:133727424 . . 0 21 hm5C_associated_SNPs_48723 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:133727417-133727449
64251 chr3 44906624 44906624 1 + C T UCEC 44906624 + 44906604 44906644 41 TGCGGACTCACCCTAATCCACAGGAAGCTCCCACCCACCTG TGCGGACTCACCCTAATCCATAGGAAGCTCCCACCCACCTG Direct Loss 0.957837825345585 0 0.2823915 0.16514325 prediction 0.91567565069117 Functional Loss - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44906624 chr3:44906624 synonymous SNV . 0 21 hm5C_associated_SNPs_48725 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:44906591-44906643
64251 chrX 100880257 100880257 1 + C A ACC 100880257 + 100880237 100880277 41 GCTAGGGCCAGGGCAAGGGCCAGGGCTACCCGGGCACGTCG GCTAGGGCCAGGGCAAGGGCAAGGGCTACCCGGGCACGTCG Direct Loss 0.957703598422672 0 0.9133131 0.9000014 prediction 0.915407196845344 Functional Loss - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880257 chrX:100880257 synonymous SNV . 0 21 hm5C_associated_SNPs_48737 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:100880250-100880284
64251 chr12 56863068 56863068 1 + C T rs117958275 56863068 + 56863048 56863088 41 TGGCAGATGTGGACATGTCCCGGGATAGCTGCATTGGTGTT TGGCAGATGTGGACATGTCCTGGGATAGCTGCATTGGTGTT Direct Loss 0.957694428456829 0 0.8305094 0.74515 prediction 0.915388856913657 Functional Loss - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863068 chr12:56863068 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_48738 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:56863031-56863074
64251 chr16 2871396 2871396 1 + C G UCEC 2871396 + 2871376 2871416 41 GGTGGACCCTTGGCCTGTAACAAGAATGGACTGTGGTATCA GGTGGACCCTTGGCCTGTAAGAAGAATGGACTGTGGTATCA Direct Loss 0.95767381810142 0 0.8244866 0.5307365 prediction 0.91534763620284 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2871396 chr16:2871396 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48740 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:2871356-2871438
64251 chr19 39215092 39215092 1 + C T HNSC 39215092 + 39215072 39215112 41 TGCAGCAGCTGGTGCCAAAACGGGACCATGCCCTCCTGGAG TGCAGCAGCTGGTGCCAAAATGGGACCATGCCCTCCTGGAG Direct Loss 0.957658884889474 0 0.90992206 0.78693473 prediction 0.915317769778947 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215092 chr19:39215092 nonsynonymous SNV 0.978 4 21 hm5C_associated_SNPs_48741 0 0 13 UPF1 POSTAR2 GSE69586,GSM1704216 chr19:39215080-39215100
64251 chr2 220098090 220098090 1 + C T COAD 220098090 + 220098070 220098110 41 CCCAGGGGCTTCGGGATGCCCGAGGTGGGCCATCACACTCT CCCAGGGGCTTCGGGATGCCTGAGGTGGGCCATCACACTCT Direct Loss 0.957647515428477 0 0.8912562 0.8184854 prediction 0.915295030856953 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098090 chr2:220098090 stopgain 0.646 1 21 hm5C_associated_SNPs_48744 0 0 5 GRWD1 POSTAR2 ENCODE chr2:220098070-220098097
64251 chr20 43514380 43514380 1 + C G rs139992012 43514380 + 43514360 43514400 41 CGCCACCGCCGCCGCCGATTCCGGAGCCGGGGTAGTCGCCG CGCCACCGCCGCCGCCGATTGCGGAGCCGGGGTAGTCGCCG Direct Loss 0.957646705593368 0 0.9257288 0.9238119 prediction 0.915293411186735 Functional Loss - YWHAB ENSG00000166913 UTR5 Human protein_coding chr20:43514380 chr20:43514380 . . 0 21 hm5C_associated_SNPs_48745 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:43514360-43514380
64251 chr11 1973375 1973375 1 + C T BLCA 1973375 + 1973355 1973395 41 AGAATGACAAGGGTGGACCTCAGGAATTACCTCGAGGGCAT AGAATGACAAGGGTGGACCTTAGGAATTACCTCGAGGGCAT Direct Loss 0.957642863190945 0 0.4510627 0.14537087 prediction 0.91528572638189 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1973375 chr11:1973375 synonymous SNV . 0 21 hm5C_associated_SNPs_48746 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:1973355-1973377
64251 chr15 99671776 99671776 1 + C T rs567669558 99671776 + 99671756 99671796 41 GCTTTAGGCGTTGGGCCACCCGGGAGCTGTACATCCCTTCA GCTTTAGGCGTTGGGCCACCTGGGAGCTGTACATCCCTTCA Direct Loss 0.957633832186026 0 0.909722 0.88584936 prediction 0.915267664372052 Functional Loss - SYNM ENSG00000182253 CDS Human protein_coding chr15:99671776 chr15:99671776 nonsynonymous SNV 0.919 2 21 hm5C_associated_SNPs_48748 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr15:99671759-99671777
64251 chr17 28706195 28706195 1 + C T COAD 28706195 + 28706175 28706215 41 CCACGAAGAGGAGTTGGAGTCGGCGCTGAGGGAGGCGGCGG CCACGAAGAGGAGTTGGAGTTGGCGCTGAGGGAGGCGGCGG Direct Loss 0.95762549740055 0 0.9210558 0.87995124 prediction 0.915250994801101 Functional Loss - CPD ENSG00000108582 CDS Human protein_coding chr17:28706195 chr17:28706195 nonsynonymous SNV 0.562 0 21 hm5C_associated_SNPs_48750 0 0 2 RPS3 POSTAR2 ENCODE chr17:28706192-28706231
64251 chr2 96933066 96933066 1 + C T UCEC 96933066 + 96933046 96933086 41 GCTCCGCCTTTAGGTGACAGCTGGATCTGCAAGTCTGTCCT GCTCCGCCTTTAGGTGACAGTTGGATCTGCAAGTCTGTCCT Direct Loss 0.957588419431266 0 0.59647006 0.4106691 prediction 0.915176838862532 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96933066 chr2:96933066 synonymous SNV . 0 21 hm5C_associated_SNPs_48755 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:96933060-96933080
64251 chr20 36500368 36500368 1 + C T STAD 36500368 + 36500348 36500388 41 ACGGCCGGAGCCCGGAGTTCCGGGAGAACGAGCAAAAGCGC ACGGCCGGAGCCCGGAGTTCTGGGAGAACGAGCAAAAGCGC Direct Loss 0.957577691198604 0 0.9196942 0.9017415 prediction 0.915155382397209 Functional Loss - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36500368 chr20:36500368 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48756 0 0 2 LARP4 POSTAR2 ENCODE chr20:36500323-36500397
64251 chr20 17550613 17550613 1 + C G rs560313690 17550613 + 17550593 17550633 41 AGATGAGGGAAGCTCCCCTCCGAGACTCTGGATAGCCGCCG AGATGAGGGAAGCTCCCCTCGGAGACTCTGGATAGCCGCCG Direct Loss 0.95756716610585 0 0.82678705 0.9116744 prediction 0.9151343322117 Functional Loss - DSTN ENSG00000125868 UTR5 Human protein_coding chr20:17550613 chr20:17550613 . . 0 21 hm5C_associated_SNPs_48757 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:17550605-17550641
64251 chr1 173455477 173455477 1 + C T BLCA 173455477 + 173455457 173455497 41 AGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTCCA AGGAACTTTGATGAGATTCTTAGGGTAGTCATCTCTCTCCA Direct Loss 0.957556036318795 0 0.93605226 0.899577 prediction 0.915112072637589 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173455477 chr1:173455477 synonymous SNV . 0 21 hm5C_associated_SNPs_48759 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:173455400-173455490
64251 chr19 4422713 4422713 1 + C T COAD 4422713 + 4422693 4422733 41 AAAAGGAGAGGCGGGAGAAGCGGGAGAAGGATGAGAAGGAG AAAAGGAGAGGCGGGAGAAGTGGGAGAAGGATGAGAAGGAG Direct Loss 0.957498644985486 0 0.8969395 0.86158955 prediction 0.914997289970971 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4422713 chr19:4422713 nonsynonymous SNV 0.963 3 21 hm5C_associated_SNPs_48767 0 0 26 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:4422700-4422720
64251 chr9 99227685 99227685 1 + C T rs34274515 99227685 + 99227665 99227705 41 GGCCCGAGAGGGGGTATGCGCGGCAGAGGCAGAGGTGGCCC GGCCCGAGAGGGGGTATGCGTGGCAGAGGCAGAGGTGGCCC Direct Loss 0.957454866084419 0 0.8951394 0.8465112 prediction 0.914909732168837 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99227685 chr9:99227685 synonymous SNV . 0 21 hm5C_associated_SNPs_48773 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:99227621-99227738
64251 chr4 1801486 1801486 1 + C T HNSC 1801486 + 1801466 1801506 41 CCTTGCAGACGCTCCATCCTCGGGAGATGACGAAGACGGGG CCTTGCAGACGCTCCATCCTTGGGAGATGACGAAGACGGGG Direct Loss 0.957435226712887 0 0.93405694 0.91317874 prediction 0.914870453425773 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1801486 chr4:1801486 nonsynonymous SNV 0.818 4 21 hm5C_associated_SNPs_48774 0 0 5 BUD13 POSTAR2 ENCODE chr4:1801479-1801536
64251 chr20 43561765 43561765 1 + C T BLCA 43561765 + 43561745 43561785 41 CGGCGCCCCCCGGCCCACATCAGCAGTGTCAGGCAGGCCTC CGGCGCCCCCCGGCCCACATTAGCAGTGTCAGGCAGGCCTC Direct Loss 0.957429023197428 0 0.91937625 0.8747398 prediction 0.914858046394857 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43561765 chr20:43561765 synonymous SNV . 0 21 hm5C_associated_SNPs_48777 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:43561762-43561801
64251 chr4 187209614 187209614 1 + C T BLCA 187209614 + 187209594 187209634 41 CCCCTCGTTCTAGGGAGATTCGGGAGGCCCTCTGTCCTGCA CCCCTCGTTCTAGGGAGATTTGGGAGGCCCTCTGTCCTGCA Direct Loss 0.95742615680314 0 0.9196402 0.9010215 prediction 0.91485231360628 Functional Loss - F11 ENSG00000088926 CDS Human protein_coding chr4:187209614 chr4:187209614 nonsynonymous SNV 0.229 5 21 hm5C_associated_SNPs_48778 2 0 3 DDX55 POSTAR2 ENCODE chr4:187209606-187209659
64251 chr19 39423095 39423095 1 + C T UCEC 39423095 + 39423075 39423115 41 CCACGGAAGGCCGGCCGCAGCTGAAGGGTGTGGTCCTGTGC CCACGGAAGGCCGGCCGCAGTTGAAGGGTGTGGTCCTGTGC Direct Loss 0.957358400617906 0 0.5384562 0.5455286 prediction 0.914716801235812 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423095 chr19:39423095 synonymous SNV . 0 21 hm5C_associated_SNPs_48782 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:39423080-39423100
64251 chr7 148952336 148952336 1 + C T rs138956229 148952336 + 148952316 148952356 41 GTCTGGGACTTGCGGTGTCTCGGCATACCCCTCTCCTCTTC GTCTGGGACTTGCGGTGTCTTGGCATACCCCTCTCCTCTTC Direct Loss 0.957358020296124 0 0.7641474 0.37974274 prediction 0.914716040592248 Functional Loss - ZNF212 ENSG00000170260 UTR3 Human protein_coding chr7:148952336 chr7:148952336 . . 0 21 hm5C_associated_SNPs_48783 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:148952332-148952368
64251 chr19 4258395 4258395 1 + C G UCEC 4258395 + 4258375 4258415 41 AGGAGCGGCGGAGGCAGCAGCAGGAGGAGGACGAGCAGGAG AGGAGCGGCGGAGGCAGCAGGAGGAGGAGGACGAGCAGGAG Direct Loss 0.957323368344069 0 0.9236536 0.92798746 prediction 0.914646736688138 Functional Loss - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4258395 chr19:4258395 nonsynonymous SNV 0.057 0 21 hm5C_associated_SNPs_48788 0 0 1 PPIG POSTAR2 ENCODE chr19:4258351-4258419
64251 chr7 150772487 150772487 1 - G A OV 150772487 - 150772467 150772507 41 CATGACAGTGAGCGCGTTGGCGTGAGTGACAGAGCGGACAG CATGACAGTGAGCGCGTTGGTGTGAGTGACAGAGCGGACAG Direct Loss 0.957310003728137 0 0.30421045 0.2476643 prediction 0.914620007456274 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772487 chr7:150772487 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_48791 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:150772452-150772491
64251 chr2 219268015 219268015 1 + C T BLCA 219268015 + 219267995 219268035 41 CCTTCCGGGCCCGGCTGTTTCGAGAGTCCTGCGTCTTCCAC CCTTCCGGGCCCGGCTGTTTTGAGAGTCCTGCGTCTTCCAC Direct Loss 0.957285534341953 0 0.9502516 0.9277731 prediction 0.914571068683906 Functional Loss - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219268015 chr2:219268015 stopgain 0.997 1 21 hm5C_associated_SNPs_48793 0 0 1 GRWD1 POSTAR2 ENCODE chr2:219268004-219268128
64251 chr3 9960070 9960070 1 + C T rs708567 9960070 + 9960050 9960090 41 GTTTGGAGGAGCAGCTGACTCAGGGGTGGAGGAGCCTAGGA GTTTGGAGGAGCAGCTGACTTAGGGGTGGAGGAGCCTAGGA Direct Loss 0.957238882344985 0 0.93523467 0.905218 prediction 0.914477764689971 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9960070 chr3:9960070 nonsynonymous SNV 0.003 0 21 hm5C_associated_SNPs_48798 0 0 3 DDX24 POSTAR2 ENCODE chr3:9960041-9960082
64251 chr17 34901624 34901624 1 + C T UCEC 34901624 + 34901604 34901644 41 GGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCCCCT GGGGAGGAGGAGTTCCCCTTTGAGAGGAGGCAGATTCCCCT Direct Loss 0.95722882161572 0 0.91082513 0.8012551 prediction 0.914457643231441 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34901624 chr17:34901624 synonymous SNV . 0 21 hm5C_associated_SNPs_48800 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:34901601-34901625
64251 chr6 27806769 27806769 1 + C T LUSC 27806769 + 27806749 27806789 41 CCAGGGGAGCTGGCCAAGCACGCGGTGTCGGAGGGCACCAA CCAGGGGAGCTGGCCAAGCATGCGGTGTCGGAGGGCACCAA Direct Loss 0.957228165919104 0 0.9151159 0.9082012 prediction 0.914456331838207 Functional Loss - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806769 chr6:27806769 synonymous SNV . 0 21 hm5C_associated_SNPs_48804 0 0 7 METAP2 POSTAR2 ENCODE chr6:27806700-27806777
64251 chr10 7763735 7763735 1 + C A ACC 7763735 + 7763715 7763755 41 GAGAAGAGAAGGCTGGTGAACTGGAGGTGAGTGCACACCGG GAGAAGAGAAGGCTGGTGAAATGGAGGTGAGTGCACACCGG Direct Loss 0.957217448256903 0 0.89233816 0.89601123 prediction 0.914434896513805 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7763735 chr10:7763735 nonsynonymous SNV 0.239 4 21 hm5C_associated_SNPs_48805 0 0 2 PRPF8 POSTAR2 ENCODE chr10:7763714-7763778
64251 chr9 119461858 119461858 1 + C T SKCM 119461858 + 119461838 119461878 41 GGGGCTATAGTGTCCTTATTCGAGAGGGACTTACCTGTCCG GGGGCTATAGTGTCCTTATTTGAGAGGGACTTACCTGTCCG Direct Loss 0.957194065692224 0 0.89496267 0.77604586 prediction 0.914388131384448 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461858 chr9:119461858 stopgain 0.996 0 21 hm5C_associated_SNPs_48807 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:119461840-119461880
64251 chr3 63898895 63898895 1 + C A COAD 63898895 + 63898875 63898915 41 GCGAAGTCATGGGGCTCTGTCGGGAAGGTGAGTCCAGCCCC GCGAAGTCATGGGGCTCTGTAGGGAAGGTGAGTCCAGCCCC Direct Loss 0.957167392225647 0 0.9262108 0.5857989 prediction 0.914334784451293 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63898895 chr3:63898895 synonymous SNV . 0 21 hm5C_associated_SNPs_48810 0 0 4 BUD13 POSTAR2 ENCODE chr3:63898824-63898899
64251 chr15 79165480 79165480 1 + C T rs555391005 79165480 + 79165460 79165500 41 GGTGATTGAGGCTTGAGGGCCGGGGGCGGCGCGGGCTGCGC GGTGATTGAGGCTTGAGGGCTGGGGGCGGCGCGGGCTGCGC Direct Loss 0.95714608202257 0 0.9017401 0.86993706 prediction 0.91429216404514 Functional Loss - MORF4L1 ENSG00000185787 UTR5 Human protein_coding chr15:79165480 chr15:79165480 . . 0 21 hm5C_associated_SNPs_48813 0 0 9 CDC40 POSTAR2 ENCODE chr15:79165451-79165507
64251 chr2 176982051 176982051 1 + C A SKCM 176982051 + 176982031 176982071 41 CCTACGCCACCGGGAAAACCCAAGAGTACAATAATAGCCCC CCTACGCCACCGGGAAAACCAAAGAGTACAATAATAGCCCC Direct Loss 0.957131769772385 0 0.8768984 0.87632424 prediction 0.91426353954477 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982051 chr2:176982051 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_48815 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176981879-176982059
64251 chr6 26156698 26156698 1 + C T STAD 26156698 + 26156678 26156718 41 GAAGAAGAAGGCCCGCAAGTCTGCAGGTGCGGCCAAGCGCA GAAGAAGAAGGCCCGCAAGTTTGCAGGTGCGGCCAAGCGCA Direct Loss 0.957113766709912 0 0.38239533 0.16522679 prediction 0.914227533419824 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156698 chr6:26156698 nonsynonymous SNV 0.760 1 21 hm5C_associated_SNPs_48816 0 0 44 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr7 6193722 6193722 1 + C T rs200010499 6193722 + 6193702 6193742 41 CGCGGAGGGCCCGCGGGACTCGGCGTTGGCGGAAGCCCCGG CGCGGAGGGCCCGCGGGACTTGGCGTTGGCGGAAGCCCCGG Direct Loss 0.957104294448795 0 0.90759766 0.62350035 prediction 0.914208588897591 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193722 chr7:6193722 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48817 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:6193678-6193735
64251 chr16 129665 129665 1 + C T UCEC 129665 + 129645 129685 41 GTTGGAGTTCTTCGACCAGCCGGCAGTCCCCCTGGCCCGGG GTTGGAGTTCTTCGACCAGCTGGCAGTCCCCCTGGCCCGGG Direct Loss 0.95709202958593 0 0.49002105 0.24440521 prediction 0.91418405917186 Functional Loss - MPG ENSG00000103152 CDS Human protein_coding chr16:129665 chr16:129665 nonsynonymous SNV 0.184 4 21 hm5C_associated_SNPs_48820 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:129655-129701
64251 chr19 14674683 14674683 1 + C T UCEC 14674683 + 14674663 14674703 41 CCACGGCCACACTGTACTTCCGGGACCTGGGGGCCCAGATC CCACGGCCACACTGTACTTCTGGGACCTGGGGGCCCAGATC Direct Loss 0.957056117695414 0 0.90441895 0.73663104 prediction 0.914112235390828 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14674683 chr19:14674683 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48822 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:14674660-14674691
64251 chr19 19638863 19638863 1 + C T STAD 19638863 + 19638843 19638883 41 CGCTGGGTGCCCCCCTTGATCGGGGAGCTGTACGGGCTGCG CGCTGGGTGCCCCCCTTGATTGGGGAGCTGTACGGGCTGCG Direct Loss 0.957042752976342 0 0.9637331 0.94087684 prediction 0.914085505952685 Functional Loss - NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638863 chr19:19638863 synonymous SNV . 0 21 hm5C_associated_SNPs_48826 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr19 7985294 7985294 1 + C G HNSC 7985294 + 7985274 7985314 41 GAGCGGCCCCGGCGCGCTATCTGGGCGAGGTGACCGGTCCC GAGCGGCCCCGGCGCGCTATGTGGGCGAGGTGACCGGTCCC Direct Loss 0.957029580333823 0 0.9335259 0.89966273 prediction 0.914059160667646 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7985294 chr19:7985294 nonsynonymous SNV 0.553 0 21 hm5C_associated_SNPs_48831 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:7985293-7985294
64251 chr19 49464847 49464847 1 + C T STAD 49464847 + 49464827 49464867 41 GACCGTGACCATCTTTGTGGCGGGAGTGCTCACCGCCTCAC GACCGTGACCATCTTTGTGGTGGGAGTGCTCACCGCCTCAC Direct Loss 0.957027088637573 0 0.8792026 0.5390395 prediction 0.914054177275146 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464847 chr19:49464847 nonsynonymous SNV 0.916 2 21 hm5C_associated_SNPs_48832 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr5 633995 633995 1 + C T CESC 633995 + 633975 634015 41 GCAGAGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGCAC GCAGAGTGCGAGTGGGACCTTGGCAGGCCTCCCGGGAGCAC Direct Loss 0.95702570808283 0 0.59633654 0.44651154 prediction 0.914051416165659 Functional Loss - CEP72 ENSG00000112877 CDS Human protein_coding chr5:633995 chr5:633995 synonymous SNV . 0 21 hm5C_associated_SNPs_48833 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:633963-633998
64251 chr20 61919072 61919072 1 + C T BLCA 61919072 + 61919052 61919092 41 ACGTGCGCGGACACCTCCACCGAGAGGAGGAGCTCGGACAG ACGTGCGCGGACACCTCCACTGAGAGGAGGAGCTCGGACAG Direct Loss 0.956939856543037 0 0.94407237 0.9369062 prediction 0.913879713086073 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919072 chr20:61919072 synonymous SNV . 0 21 hm5C_associated_SNPs_48838 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61919051-61919076
64251 chr15 29346518 29346518 1 + C T rs144066720 29346518 + 29346498 29346538 41 GGTGGAGGAGTGGACGGACTCGGCGGGCCCGCACCCCCACG GGTGGAGGAGTGGACGGACTTGGCGGGCCCGCACCCCCACG Direct Loss 0.956931774460508 0 0.9122436 0.88921905 prediction 0.913863548921016 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346518 chr15:29346518 nonsynonymous SNV 0.114 1 21 hm5C_associated_SNPs_48840 0 0 3 FXR2 POSTAR2 ENCODE chr15:29346408-29346530
64251 chr8 122652154 122652154 1 + C G rs111529237 122652154 + 122652134 122652174 41 CCGTTCATCGGCTGGGCGCTCGAGACGGCGCCCCCAGATCT CCGTTCATCGGCTGGGCGCTGGAGACGGCGCCCCCAGATCT Direct Loss 0.956927560472447 0 0.84293693 0.81721294 prediction 0.913855120944895 Functional Loss - HAS2-AS1 ENSG00000248690 ncRNA_exonic Human antisense chr8:122652154 chr8:122652154 . . 0 21 hm5C_associated_SNPs_48841 0 0 1 WTAP POSTAR2 GSE46705,GSM1135010 chr8:122652140-122652160
64251 chr17 46628442 46628442 1 + C A PRAD 46628442 + 46628422 46628462 41 CCGCTTGGACGCCGCCGACCCCGGGGGGCTCTTGTCCCCTC CCGCTTGGACGCCGCCGACCACGGGGGGCTCTTGTCCCCTC Direct Loss 0.956927483176346 0 0.9330416 0.9364301 prediction 0.913854966352692 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628442 chr17:46628442 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_48843 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chr10 11894170 11894170 1 + C T KIRC 11894170 + 11894150 11894190 41 CCTTCAGCAGAGGCGGCAGCCTGGAGAGTCGAAGCAGCAGC CCTTCAGCAGAGGCGGCAGCTTGGAGAGTCGAAGCAGCAGC Direct Loss 0.956911141266053 0 0.59735334 0.5256868 prediction 0.913822282532105 Functional Loss - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11894170 chr10:11894170 synonymous SNV . 0 21 hm5C_associated_SNPs_48845 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:11894154-11894180
64251 chr11 47260392 47260392 1 + C T UCEC 47260392 + 47260372 47260412 41 GCCAGGAGGAAGCCAGGACACGGAAGTGAGAGACACTAAAG GCCAGGAGGAAGCCAGGACATGGAAGTGAGAGACACTAAAG Direct Loss 0.956891978462007 0 0.8232244 0.35271633 prediction 0.913783956924014 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47260392 chr11:47260392 nonsynonymous SNV 0.105 2 21 hm5C_associated_SNPs_48848 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47260367-47260394
64251 chr1 171761191 171761191 1 + C G rs2232822 171761191 + 171761171 171761211 41 TTGTTGGTGGTAGGCCTGGGCGGGGGCAGCCTCCCCCTCTT TTGTTGGTGGTAGGCCTGGGGGGGGGCAGCCTCCCCCTCTT Direct Loss 0.956861471080915 0 0.93745095 0.9283129 prediction 0.91372294216183 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171761191 chr1:171761191 synonymous SNV . 0 21 hm5C_associated_SNPs_48851 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:171761173-171761196
64251 chr19 9949194 9949194 1 + C T PAAD 9949194 + 9949174 9949214 41 AGCAGCAGTGGTGGCAAAAACGGGCAGGGGGAGCCTGCCAG AGCAGCAGTGGTGGCAAAAATGGGCAGGGGGAGCCTGCCAG Direct Loss 0.956849249313487 0 0.86725086 0.763929 prediction 0.913698498626974 Functional Loss - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9949194 chr19:9949194 synonymous SNV . 0 21 hm5C_associated_SNPs_48853 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:9949119-9949214
64251 chr19 12923992 12923992 1 + C T SKCM 12923992 + 12923972 12924012 41 GGCGCACGGCCCAGACCATCCTGGAGAAAGAGGCGGAAGAT GGCGCACGGCCCAGACCATCTTGGAGAAAGAGGCGGAAGAT Direct Loss 0.956838393831019 0 0.7332769 0.86665106 prediction 0.913676787662037 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12923992 chr19:12923992 synonymous SNV . 0 21 hm5C_associated_SNPs_48856 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:12923985-12924010
64251 chr11 67379625 67379625 1 + C T SKCM 67379625 + 67379605 67379645 41 AACAAGGTGATGGCACGTTTCGTGAGGGGGGATGCCCGGCC AACAAGGTGATGGCACGTTTTGTGAGGGGGGATGCCCGGCC Direct Loss 0.956835556212302 0 0.90863454 0.71859646 prediction 0.913671112424605 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67379625 chr11:67379625 synonymous SNV . 0 21 hm5C_associated_SNPs_48857 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67379605-67379654
64251 chr1 64102039 64102039 1 + C T OV 64102039 + 64102019 64102059 41 GGCTTTGCACGGAGCATGCCCACGAGTGGTGCTCTGGACCG GGCTTTGCACGGAGCATGCCTACGAGTGGTGCTCTGGACCG Direct Loss 0.956834029235167 0 0.8159325 0.7236986 prediction 0.913668058470334 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64102039 chr1:64102039 synonymous SNV . 0 21 hm5C_associated_SNPs_48859 0 0 1 RPS3 POSTAR2 ENCODE chr1:64101977-64102041
64251 chrX 129546548 129546548 1 + C G LUAD 129546548 + 129546528 129546568 41 CAAATCCAGGACGGCCTACTCTGGTGGAGCAGAGGACCTAG CAAATCCAGGACGGCCTACTGTGGTGGAGCAGAGGACCTAG Direct Loss 0.956832639682175 0 0.8462782 0.44234666 prediction 0.913665279364351 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546548 chrX:129546548 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48860 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129546519-129546550
64251 chr3 51733461 51733461 1 + C T STAD 51733461 + 51733441 51733481 41 ATCCTCGGCTGGAGATCTACCAGGAAGACCAGATCCATTTC ATCCTCGGCTGGAGATCTACTAGGAAGACCAGATCCATTTC Direct Loss 0.956821736279662 0 0.8891429 0.44589815 prediction 0.913643472559325 Functional Loss - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51733461 chr3:51733461 stopgain 0.994 0 21 hm5C_associated_SNPs_48862 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:51733437-51733467
64251 chr6 30314294 30314294 1 + C A OV 30314294 + 30314274 30314314 41 AATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGC AATGATCCCGGGCATTTACTATGGGGAGACAGGCCTGAGGC Direct Loss 0.95680468845236 0 0.88767797 0.59655994 prediction 0.913609376904719 Functional Loss - RPP21;TRIM39-RPP21 ENSG00000241370;ENSG00000248167 CDS Human other chr6:30314294 chr6:30314294 synonymous SNV . 0 21 hm5C_associated_SNPs_48865 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:30314266-30314296
64251 chr19 1106674 1106674 1 + C T rs113282777 1106674 + 1106654 1106694 41 ACCTGCTGGTGGGGCAGACCCGAAAATCCAGCGTGCACCCC ACCTGCTGGTGGGGCAGACCTGAAAATCCAGCGTGCACCCC Direct Loss 0.956792342793394 0 0.8979721 0.28173205 prediction 0.913584685586789 Functional Loss - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1106674 chr19:1106674 stopgain 0.012 0 21 hm5C_associated_SNPs_48867 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704215 chr19:1106660-1106680
64251 chr22 50278356 50278356 1 + C T COAD 50278356 + 50278336 50278376 41 GAACGGGGGCACGGGCATCCCGCCACTGTACTCCACCCCTC GAACGGGGGCACGGGCATCCTGCCACTGTACTCCACCCCTC Direct Loss 0.956773787182509 0 0.29904783 0.10689053 prediction 0.913547574365018 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278356 chr22:50278356 nonsynonymous SNV 0.019 4 21 hm5C_associated_SNPs_48868 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50278340-50278360
64251 chr1 51439912 51439912 1 + C T rs2500450 51439912 + 51439892 51439932 41 GTTAGCCTGATGCAGGCAAACGGGGCTGGGGGAGCCACAAA GTTAGCCTGATGCAGGCAAATGGGGCTGGGGGAGCCACAAA Direct Loss 0.956758056140057 0 0.8991387 0.83121514 prediction 0.913516112280114 Functional Loss - CDKN2C ENSG00000123080 CDS Human protein_coding chr1:51439912 chr1:51439912 synonymous SNV . 0 21 hm5C_associated_SNPs_48873 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:51439892-51439954
64251 chr16 29827954 29827954 1 + C T LGG 29827954 + 29827934 29827974 41 GCTCTGGCCGTGGAGGATACCGGAGGCCCCTCTGCCTCGGC GCTCTGGCCGTGGAGGATACTGGAGGCCCCTCTGCCTCGGC Direct Loss 0.95674857396678 0 0.9380291 0.91997826 prediction 0.91349714793356 Functional Loss - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29827954 chr16:29827954 synonymous SNV . 0 21 hm5C_associated_SNPs_48874 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585673 chr16:29827943-29827967
64251 chr1 32502610 32502610 1 + C T UCEC 32502610 + 32502590 32502630 41 GTGGGGTGCCAGTGAGAGGCCGGGGAGCTGCACCTCCTCCA GTGGGGTGCCAGTGAGAGGCTGGGGAGCTGCACCTCCTCCA Direct Loss 0.956677568381281 0 0.94082344 0.9334714 prediction 0.913355136762563 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502610 chr1:32502610 nonsynonymous SNV 0.954 1 21 hm5C_associated_SNPs_48879 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32502558-32502614
64251 chr17 7465479 7465479 1 + C T rs543387051 7465479 + 7465459 7465499 41 ACGGCTGCGCCTAAAGACAGCAGGAGTGGCGGGGCCGCCGC ACGGCTGCGCCTAAAGACAGTAGGAGTGGCGGGGCCGCCGC Direct Loss 0.956601962013024 0 0.87484217 0.84966683 prediction 0.913203924026049 Functional Loss - SENP3-EIF4A1 ENSG00000161956 UTR5 Human protein_coding chr17:7465479 chr17:7465479 . . 0 21 hm5C_associated_SNPs_48888 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7465458-7465489
64251 chr3 5229991 5229991 1 + C T rs201295523 5229991 + 5229971 5230011 41 CGCGGCCGTGGGCCCGACCGCGGGGACCCGTGAGTAGCCCC CGCGGCCGTGGGCCCGACCGTGGGGACCCGTGAGTAGCCCC Direct Loss 0.956553999316456 0 0.90144837 0.8349043 prediction 0.913107998632912 Functional Loss - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5229991 chr3:5229991 synonymous SNV . 0 21 hm5C_associated_SNPs_48893 0 0 1 NONO POSTAR2 ENCODE chr3:5229932-5229994
64251 chr22 50655822 50655822 1 + C T rs2272853 50655822 + 50655802 50655842 41 CCTCGGCACGCTCCACACCCCTGGAGTCTCCCGAGGCCCCC CCTCGGCACGCTCCACACCCTTGGAGTCTCCCGAGGCCCCC Direct Loss 0.956543707880731 0 0.19153452 0.12216264 prediction 0.913087415761463 Functional Loss - SELENOO ENSG00000073169 UTR3 Human protein_coding chr22:50655822 chr22:50655822 . . 0 21 hm5C_associated_SNPs_48895 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50655821-50655859
64251 chr19 49983704 49983704 1 + C T rs368101323 49983704 + 49983684 49983724 41 GCCTGCACTGGCAGAGGACGCGGCGGAGGACACCCCGCCCT GCCTGCACTGGCAGAGGACGTGGCGGAGGACACCCCGCCCT Direct Loss 0.956527122903945 0 0.92287064 0.9155771 prediction 0.91305424580789 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49983704 chr19:49983704 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_48899 0 0 1 XPO5 POSTAR2 ENCODE chr19:49983667-49983728
64251 chr1 114455768 114455768 1 + C T rs536400357 114455768 + 114455748 114455788 41 GAGACCAAGGAGCCAGCTGGCGGGAAGGGGTGGGGGTGTGC GAGACCAAGGAGCCAGCTGGTGGGAAGGGGTGGGGGTGTGC Direct Loss 0.956522479526898 0 0.83333933 0.68008596 prediction 0.913044959053796 Functional Loss - DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114455768 chr1:114455768 . . 0 21 hm5C_associated_SNPs_48900 0 0 1 UPF1 POSTAR2 ENCODE chr1:114455746-114455814
64251 chrX 152036194 152036194 1 + C T BRCA 152036194 + 152036174 152036214 41 TGGCGGCAGAGCAGCTCTCCCGAGACTCGACACTGGGTGGG TGGCGGCAGAGCAGCTCTCCTGAGACTCGACACTGGGTGGG Direct Loss 0.956521449878214 0 0.834633 0.7038379 prediction 0.913042899756428 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152036194 chrX:152036194 stopgain 0.243 0 21 hm5C_associated_SNPs_48901 0 0 1 RPS3 POSTAR2 ENCODE chrX:152036175-152036208
64251 chr19 44740715 44740715 1 + C T STAD 44740715 + 44740695 44740735 41 CCATCATCAGAGGGTCCACACGGGAGAGAAACCCCATATAT CCATCATCAGAGGGTCCACATGGGAGAGAAACCCCATATAT Direct Loss 0.956501689010436 0 0.8836077 0.46775475 prediction 0.913003378020873 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44740715 chr19:44740715 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_48903 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44740645-44740718
64251 chr20 31017811 31017811 1 + C T BLCA 31017811 + 31017791 31017831 41 GTGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCTCCTG GTGGCCAGGCCGAGGTCACCTAGGACCCTGCCCCGCTCCTG Direct Loss 0.956495262081284 0 0.88383317 0.8284213 prediction 0.912990524162567 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31017811 chr20:31017811 stopgain 0.992 0 21 hm5C_associated_SNPs_48904 0 0 3 CPSF2 POSTAR2 GSE37401,GSM917670 chr20:31017799-31017825
64251 chr9 130965893 130965893 1 + C G LUAD 130965893 + 130965873 130965913 41 GCCGGCAAGAGCTCGGTGCTCGAGAATTTCGTAGGCAGGTA GCCGGCAAGAGCTCGGTGCTGGAGAATTTCGTAGGCAGGTA Direct Loss 0.956489584886111 0 0.86215866 0.87283826 prediction 0.912979169772223 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130965893 chr9:130965893 synonymous SNV . 0 21 hm5C_associated_SNPs_48906 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:130965883-130965910
64251 chr15 41523608 41523608 1 + C T PRAD 41523608 + 41523588 41523628 41 CTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAG CTCGGGCCTCCACGTTACTGTGGGACGAAGAGCTCGAGGAG Direct Loss 0.956474725851944 0 0.89975286 0.8823471 prediction 0.912949451703888 Functional Loss - CHP1 ENSG00000187446 CDS Human protein_coding chr15:41523608 chr15:41523608 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48907 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:41523600-41523620
64251 chr22 44392333 44392333 1 + C T rs115108392 44392333 + 44392313 44392353 41 CCATGCCACACACCGTCTCTCGAGGAAACGCGGTTCAGCGA CCATGCCACACACCGTCTCTTGAGGAAACGCGGTTCAGCGA Direct Loss 0.956472834136074 0 0.91290915 0.4518546 prediction 0.912945668272147 Functional Loss - SAMM50 ENSG00000100347 UTR3 Human protein_coding chr22:44392333 chr22:44392333 . . 0 21 hm5C_associated_SNPs_48908 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:44392304-44392333
64251 chr11 67376950 67376950 1 + C T rs199702939 67376950 + 67376930 67376970 41 TATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACCTG TATCTGGTGGTGAACGCAGATGAGGGGGAGCCGGGCACCTG Direct Loss 0.956438039497226 0 0.8799412 0.83972454 prediction 0.912876078994452 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376950 chr11:67376950 synonymous SNV . 0 21 hm5C_associated_SNPs_48910 1 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr20 4680289 4680289 1 + C T COAD 4680289 + 4680269 4680309 41 AGCAGGCCCATCATACATTTCGGCAGTGACTATGAGGACCG AGCAGGCCCATCATACATTTTGGCAGTGACTATGAGGACCG Direct Loss 0.956392261630081 0 0.2364712 0.18326673 prediction 0.912784523260162 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680289 chr20:4680289 synonymous SNV . 0 21 hm5C_associated_SNPs_48913 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:4680270-4680317
64251 chr17 7612771 7612771 1 + C T THCA 7612771 + 7612751 7612791 41 GGGATAGCTCTGCGGGGTGGCGGGGCTGCAGATCCCCCCTT GGGATAGCTCTGCGGGGTGGTGGGGCTGCAGATCCCCCCTT Direct Loss 0.956372420554902 0 0.9313972 0.90818715 prediction 0.912744841109803 Functional Loss - EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7612771 chr17:7612771 synonymous SNV . 0 21 hm5C_associated_SNPs_48915 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7612747-7612778
64251 chr8 38110280 38110280 1 + C T LIHC 38110280 + 38110260 38110300 41 GATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAA GATTGAACCAATGGTGGTCCTAGGAGTGGAATTTGAGCCAA Direct Loss 0.95634218816937 0 0.89144003 0.8714532 prediction 0.91268437633874 Functional Loss - DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38110280 chr8:38110280 nonsynonymous SNV 0.936 3 21 hm5C_associated_SNPs_48918 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:38110256-38110291
64251 chr13 50571301 50571301 1 + C G rs28411370 50571301 + 50571281 50571321 41 ACCCGCCGCCCGGCTCCTCTCGGGAAAGCGGGGTGGTCCTC ACCCGCCGCCCGGCTCCTCTGGGGAAAGCGGGGTGGTCCTC Direct Loss 0.956334076751363 0 0.94218785 0.8740516 prediction 0.912668153502725 Functional Loss - DLEU2 ENSG00000204977 UTR5 Human protein_coding chr13:50571301 chr13:50571301 . . 0 21 hm5C_associated_SNPs_48919 0 0 22 BUD13 POSTAR2 ENCODE chr13:50571273-50571331
64251 chrX 48336460 48336460 1 + C T GBM 48336460 + 48336440 48336480 41 GACGGACGTCAAAGGACAAGCGGGATGTCTACTACCGCCTG GACGGACGTCAAAGGACAAGTGGGATGTCTACTACCGCCTG Direct Loss 0.95630702948708 0 0.90979826 0.8714662 prediction 0.91261405897416 Functional Loss - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48336460 chrX:48336460 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_48923 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:48336408-48336466
64251 chr5 115177767 115177767 1 + C T LGG 115177767 + 115177747 115177787 41 ATCCTAATCTTCAACAACCACGGGAAGCCGCGGCTCTCCAA ATCCTAATCTTCAACAACCATGGGAAGCCGCGGCTCTCCAA Direct Loss 0.956295989576071 0 0.8335494 0.5662267 prediction 0.912591979152142 Functional Loss - AP3S1 ENSG00000177879 CDS Human protein_coding chr5:115177767 chr5:115177767 synonymous SNV . 0 21 hm5C_associated_SNPs_48925 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr5:115177760-115177780
64251 chr11 73103295 73103295 1 + C T UCEC 73103295 + 73103275 73103315 41 ACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGTGGTG ACGTGGCGTGGAGGTGGCAGTAGGGGCCAGCAGCGGTGGTG Direct Loss 0.956269923274073 0 0.9018526 0.8846239 prediction 0.912539846548147 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73103295 chr11:73103295 nonsynonymous SNV 0.870 0 21 hm5C_associated_SNPs_48926 0 0 3 BUD13 POSTAR2 ENCODE chr11:73103241-73103319
64251 chr20 4667168 4667168 1 + C A rs559032383 4667168 + 4667148 4667188 41 GACCGAGGCAGGTAAACGCCCGGGGTGGGAGGAACGCGGGC GACCGAGGCAGGTAAACGCCAGGGGTGGGAGGAACGCGGGC Direct Loss 0.956242094885591 0 0.90674376 0.90760916 prediction 0.912484189771182 Functional Loss - PRNP ENSG00000171867 intronic Human protein_coding chr20:4667168 chr20:4667168 . . 0 21 hm5C_associated_SNPs_48929 0 0 2 EFTUD2 POSTAR2 ENCODE chr20:4667138-4667279
64251 chr20 4680058 4680058 1 + C G LUAD 4680058 + 4680038 4680078 41 GGGCAGCCTCATGGTGGTGGCTGGGGGCAGCCTCATGGTGG GGGCAGCCTCATGGTGGTGGGTGGGGGCAGCCTCATGGTGG Direct Loss 0.95622453281474 0 0.8786253 0.87628746 prediction 0.91244906562948 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680058 chr20:4680058 synonymous SNV . 0 21 hm5C_associated_SNPs_48933 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:4680058-4680059
64251 chr17 1944907 1944907 1 + C A LUSC 1944907 + 1944887 1944927 41 ACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTAGGCGGGGGC ACGCCCCGGGCCGGCCCGCGAGGGGGAAGGTAGGCGGGGGC Direct Loss 0.956191444549748 0 0.9377328 0.92077136 prediction 0.912382889099496 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1944907 chr17:1944907 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_48936 0 0 1 PPIG POSTAR2 ENCODE chr17:1944809-1944907
64251 chr12 50480064 50480064 1 + C A SARC 50480064 + 50480044 50480084 41 AGTCAGGGATGGATCAGTCCCGCAAGAGACCTGCCCCTCAG AGTCAGGGATGGATCAGTCCAGCAAGAGACCTGCCCCTCAG Direct Loss 0.956189168212024 0 0.4241529 0.36383972 prediction 0.912378336424048 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50480064 chr12:50480064 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_48938 0 0 1 FMR1 POSTAR2 ENCODE chr12:50479988-50480110
64251 chr5 179126070 179126070 1 + C T rs185536392 179126070 + 179126050 179126090 41 GGTGTGCGGGCGGGAAGGGGCACGGGCACCCCCGCGGTCCC GGTGTGCGGGCGGGAAGGGGTACGGGCACCCCCGCGGTCCC Direct Loss 0.956184552934784 0 0.88651615 0.85463035 prediction 0.912369105869568 Functional Loss - CANX ENSG00000127022 CDS Human protein_coding chr5:179126070 chr5:179126070 unknown . 0 21 hm5C_associated_SNPs_48939 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:179125940-179126080
64251 chrX 118708894 118708894 1 + C T UCEC 118708894 + 118708874 118708914 41 GATCCTCCAGCCGGAGTCAGCGGGGCTCCGTCCGAGAACAA GATCCTCCAGCCGGAGTCAGTGGGGCTCCGTCCGAGAACAA Direct Loss 0.956173214688604 0 0.92455745 0.89181685 prediction 0.912346429377209 Functional Loss - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118708894 chrX:118708894 synonymous SNV . 0 21 hm5C_associated_SNPs_48942 0 0 6 BUD13 POSTAR2 ENCODE chrX:118708858-118708993
64251 chr20 43243338 43243338 1 + C T STAD 43243338 + 43243318 43243358 41 GACATGGGCGAGCTGGCACTCGAGGGGGCAGGTTAGAGCCA GACATGGGCGAGCTGGCACTTGAGGGGGCAGGTTAGAGCCA Direct Loss 0.956144751862484 0 0.9333665 0.9105489 prediction 0.912289503724969 Functional Loss - PKIG ENSG00000168734 CDS Human protein_coding chr20:43243338 chr20:43243338 synonymous SNV . 0 21 hm5C_associated_SNPs_48948 0 0 2 GRWD1 POSTAR2 ENCODE chr20:43243280-43243351
64251 chr17 18638554 18638554 1 + C G CESC 18638554 + 18638534 18638574 41 CCACTCAAAGCTGGCCCTTTCTGGAGGCTCGGGGTCTATAT CCACTCAAAGCTGGCCCTTTGTGGAGGCTCGGGGTCTATAT Direct Loss 0.956092760278707 0 0.9271232 0.91572285 prediction 0.912185520557415 Functional Loss - TRIM16L ENSG00000108448 CDS Human protein_coding chr17:18638554 chr17:18638554 nonsynonymous SNV 0.436 0 21 hm5C_associated_SNPs_48951 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18638516-18638572
64251 chr19 34262922 34262922 1 + C A rs149660944 34262922 + 34262902 34262942 41 AACCCACAGAGAGGGTCACTCGGGACTTATCCAGTGGGGCC AACCCACAGAGAGGGTCACTAGGGACTTATCCAGTGGGGCC Direct Loss 0.956048014375203 0 0.9432882 0.91655153 prediction 0.912096028750407 Functional Loss - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34262922 chr19:34262922 synonymous SNV . 0 21 hm5C_associated_SNPs_48957 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:34262914-34262935
64251 chr22 50615944 50615944 1 + C T UCEC 50615944 + 50615924 50615964 41 GGGCGCGTCCCCGGACGGGGCGGCAGGTGCGGGGCCCGCGG GGGCGCGTCCCCGGACGGGGTGGCAGGTGCGGGGCCCGCGG Direct Loss 0.956032107723373 0 0.91133624 0.90237975 prediction 0.912064215446746 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615944 chr22:50615944 nonsynonymous SNV 0.004 0 21 hm5C_associated_SNPs_48960 0 0 2 RBM15 POSTAR2 ENCODE chr22:50615896-50615955
64251 chr11 67352180 67352180 1 + C T STAD 67352180 + 67352160 67352200 41 ACGGGCAGCTCCCCAAGTTCCAGGACGGAGACCTCACCCTG ACGGGCAGCTCCCCAAGTTCTAGGACGGAGACCTCACCCTG Direct Loss 0.956027453058788 0 0.7689973 0.7646353 prediction 0.912054906117575 Functional Loss - GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67352180 chr11:67352180 stopgain 0.997 0 21 hm5C_associated_SNPs_48961 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67352157-67352243
64251 chr1 3397035 3397035 1 + C T SKCM 3397035 + 3397015 3397055 41 GGCTCTATGGCGAGAGGCTCCGGGACGGAGAGACGGGATGG GGCTCTATGGCGAGAGGCTCTGGGACGGAGAGACGGGATGG Direct Loss 0.956000315097122 0 0.95153993 0.9454409 prediction 0.912000630194244 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3397035 chr1:3397035 nonsynonymous SNV 0.222 4 21 hm5C_associated_SNPs_48966 0 0 2 PPIG POSTAR2 ENCODE chr1:3397010-3397072
64251 chr15 93426649 93426649 1 + C A rs2304654 93426649 + 93426629 93426669 41 CGGGGCCCCGCTGCAGAGCCCGCGGGCGGCAGGTGGGCGGG CGGGGCCCCGCTGCAGAGCCAGCGGGCGGCAGGTGGGCGGG Direct Loss 0.955982362100709 0 0.8950418 0.8928536 prediction 0.911964724201418 Functional Loss - LINC01578 ENSG00000272888 ncRNA_intronic Human processed_transcript chr15:93426649 chr15:93426649 . . 0 21 hm5C_associated_SNPs_48969 0 0 8 AARS POSTAR2 ENCODE chr15:93426617-93426683
64251 chr16 1751935 1751935 1 + C T rs1136070 1751935 + 1751915 1751955 41 TGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGTGAGGCAGG TGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGTGAGGCAGG Direct Loss 0.9559629035834 0 0.92999077 0.9117613 prediction 0.911925807166799 Functional Loss - JPT2 ENSG00000206053 UTR3 Human protein_coding chr16:1751935 chr16:1751935 . . 0 21 hm5C_associated_SNPs_48971 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1751850-1751968
64251 chr7 89866428 89866428 1 + C T rs17866173 89866428 + 89866408 89866448 41 TGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCT TGCTGGGATTGTGGATATAATAGGAGCCCTGGCAGCTGTCT Direct Loss 0.955956134370255 0 0.45869863 0.20195463 prediction 0.91191226874051 Functional Loss - STEAP2 ENSG00000157214 UTR3 Human protein_coding chr7:89866428 chr7:89866428 . . 0 21 hm5C_associated_SNPs_48972 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr7:89866406-89866430
64251 chr3 39433446 39433446 1 + C T COAD 39433446 + 39433426 39433466 41 GCCTGACAGCAACTCTCCTTCGAGATGCGCCCTTCTCAGGA GCCTGACAGCAACTCTCCTTTGAGATGCGCCCTTCTCAGGA Direct Loss 0.955940774331834 0 0.9440303 0.6868368 prediction 0.911881548663668 Functional Loss - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39433446 chr3:39433446 stopgain 0.985 1 21 hm5C_associated_SNPs_48974 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:39433407-39433454
64251 chr1 29069012 29069012 1 + C T STAD 29069012 + 29068992 29069032 41 GGGTGAAGCTGCTTGGTCTACGGGGGGTGACACAGCCATGC GGGTGAAGCTGCTTGGTCTATGGGGGGTGACACAGCCATGC Direct Loss 0.955939816298306 0 0.94872105 0.94175315 prediction 0.911879632596613 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069012 chr1:29069012 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_48976 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr3 14989286 14989286 1 - G A rs547567795 14989286 - 14989266 14989306 41 GATGGCGGGAGCCCGGGGGCCGCGGGCTCGCGGGGCAGCGG GATGGCGGGAGCCCGGGGGCTGCGGGCTCGCGGGGCAGCGG Direct Loss 0.955904987417867 0 0.93200505 0.91655123 prediction 0.911809974835733 Functional Loss - FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989286 chr3:14989286 . . 0 21 hm5C_associated_SNPs_48982 0 0 2 AARS POSTAR2 ENCODE chr3:14989233-14989286
64251 chr11 47283128 47283128 1 + C T COAD 47283128 + 47283108 47283148 41 TGGCACCAGATCCCCATAGCCGGGAGGCCCGTCAGCAGCGC TGGCACCAGATCCCCATAGCTGGGAGGCCCGTCAGCAGCGC Direct Loss 0.955888092362071 0 0.8949062 0.8790709 prediction 0.911776184724141 Functional Loss - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47283128 chr11:47283128 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_48984 0 0 1 GRWD1 POSTAR2 ENCODE chr11:47283111-47283275
64251 chr13 24466084 24466084 1 + C T SKCM 24466084 + 24466064 24466104 41 CCCCTGAGGCCCAGTCTCTCCTCGGAGGCCTTTCTCTCCCA CCCCTGAGGCCCAGTCTCTCTTCGGAGGCCTTTCTCTCCCA Direct Loss 0.955822092523957 0 0.63655174 0.8697153 prediction 0.911644185047913 Functional Loss - C1QTNF9B ENSG00000205863 CDS Human protein_coding chr13:24466084 chr13:24466084 nonsynonymous SNV 0.320 5 21 hm5C_associated_SNPs_48991 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:24466077-24466117
64251 chr15 91488154 91488154 1 + C G LUSC 91488154 + 91488134 91488174 41 TTTTGGAAGTGGGGGGCTCTCTACAGGACCCTCCTGGGGAG TTTTGGAAGTGGGGGGCTCTGTACAGGACCCTCCTGGGGAG Direct Loss 0.955815165366794 0 0.87424767 0.3628358 prediction 0.911630330733588 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91488154 chr15:91488154 nonsynonymous SNV 0.452 0 21 hm5C_associated_SNPs_48994 0 0 5 BUD13 POSTAR2 ENCODE chr15:91488091-91488156
64251 chr6 146865181 146865181 1 + C A rs142273767 146865181 + 146865161 146865201 41 CAGCACTACCGGGCCACCATCGGGGTGGACTTCGCCCTCAA CAGCACTACCGGGCCACCATAGGGGTGGACTTCGCCCTCAA Direct Loss 0.955796112491224 0 0.96535325 0.9343352 prediction 0.911592224982449 Functional Loss - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146865181 chr6:146865181 synonymous SNV . 0 21 hm5C_associated_SNPs_48996 0 0 1 TBRG4 POSTAR2 ENCODE chr6:146865180-146865224
64251 chr13 21722190 21722190 1 + C A rs1046530 21722190 + 21722170 21722210 41 TGAAGGAGGAATCTTAAGACCGAGGGAGAAGAGCCAAGGAC TGAAGGAGGAATCTTAAGACAGAGGGAGAAGAGCCAAGGAC Direct Loss 0.955786982073622 0 0.8844899 0.6931861 prediction 0.911573964147245 Functional Loss - SAP18 ENSG00000150459 UTR3 Human protein_coding chr13:21722190 chr13:21722190 . . 0 21 hm5C_associated_SNPs_49000 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr13:21722066-21722198
64251 chr17 61851588 61851588 1 + C G rs9913551 61851588 + 61851568 61851608 41 GGCGGTGGTGGCGGTGGCGGCGGCGGTGGTGGTGGTGGCGG GGCGGTGGTGGCGGTGGCGGGGGCGGTGGTGGTGGTGGCGG Direct Loss 0.955724872654451 0 0.88129187 0.8940684 prediction 0.911449745308901 Functional Loss - DDX42 ENSG00000198231 UTR5 Human protein_coding chr17:61851588 chr17:61851588 . . 0 21 hm5C_associated_SNPs_49006 0 0 6 EFTUD2 POSTAR2 ENCODE chr17:61851560-61851773
64251 chr16 81069793 81069793 1 + C T GBM 81069793 + 81069773 81069813 41 GCGCTCAACATGCACCTAGTCAAGAGCCACCGCCTGCAGGT GCGCTCAACATGCACCTAGTTAAGAGCCACCGCCTGCAGGT Direct Loss 0.955686844846738 0 0.7506854 0.2656141 prediction 0.911373689693477 Functional Loss - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81069793 chr16:81069793 synonymous SNV . 0 21 hm5C_associated_SNPs_49010 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:81069773-81069807
64251 chr19 10395489 10395489 1 + C G rs112301533 10395489 + 10395469 10395509 41 ACTGGACGAGAGGGATTGTCCGGGAAACTGGACGTGGCCAG ACTGGACGAGAGGGATTGTCGGGGAAACTGGACGTGGCCAG Direct Loss 0.955684158503989 0 0.88924444 0.93795127 prediction 0.911368317007978 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395489 chr19:10395489 nonsynonymous SNV 0.024 3 21 hm5C_associated_SNPs_49011 0 0 5 NOL12 POSTAR2 ENCODE chr19:10395477-10395498
64251 chr19 30312684 30312684 1 + C A OV 30312684 + 30312664 30312704 41 TGTGACAGATGGAGCTTGTTCAGGAGATGAAATTCTCACCA TGTGACAGATGGAGCTTGTTAAGGAGATGAAATTCTCACCA Direct Loss 0.955667914476989 0 0.89169204 0.3710873 prediction 0.911335828953978 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30312684 chr19:30312684 stopgain 0.995 1 21 hm5C_associated_SNPs_49013 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:30312662-30312697
64251 chr6 27100982 27100982 1 + C T BRCA 27100982 + 27100962 27101002 41 GGCAACTATGCCGAGCGGGTCGGGGCCGGCGCGCCGGTGTA GGCAACTATGCCGAGCGGGTTGGGGCCGGCGCGCCGGTGTA Direct Loss 0.955665591741814 0 0.9222009 0.8961708 prediction 0.911331183483628 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100982 chr6:27100982 synonymous SNV . 0 21 hm5C_associated_SNPs_49016 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr2 242098754 242098754 1 + C T UCEC 242098754 + 242098734 242098774 41 ATCTGGAGGCGCTAACAGAGCTGGAGTGAGTCATGAGACCC ATCTGGAGGCGCTAACAGAGTTGGAGTGAGTCATGAGACCC Direct Loss 0.955628734933226 0 0.2381233 0.19138435 prediction 0.911257469866452 Functional Loss - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242098754 chr2:242098754 synonymous SNV . 0 21 hm5C_associated_SNPs_49021 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:242098721-242098754
64251 chr19 4432135 4432135 1 + C T SKCM 4432135 + 4432115 4432155 41 AGCAGTTCGCAGCCTGCTTCCTGGAGACCCTGCCGGCCCAG AGCAGTTCGCAGCCTGCTTCTTGGAGACCCTGCCGGCCCAG Direct Loss 0.955607043766655 0 0.8119687 0.8621435 prediction 0.911214087533309 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4432135 chr19:4432135 synonymous SNV . 0 21 hm5C_associated_SNPs_49023 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:4432091-4432141
64251 chr19 7712143 7712143 1 + C A rs139200597 7712143 + 7712123 7712163 41 GCCGCTGTCAGGTGAGGCCCCGGGGCCGCCCCCGCCCACGC GCCGCTGTCAGGTGAGGCCCAGGGGCCGCCCCCGCCCACGC Direct Loss 0.955589638463621 0 0.9142838 0.91883075 prediction 0.911179276927243 Functional Loss - STXBP2 ENSG00000076944 intronic Human protein_coding chr19:7712143 chr19:7712143 . . 0 21 hm5C_associated_SNPs_49024 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:7712140-7712160
64251 chr10 131565221 131565221 1 + C T GBM 131565221 + 131565201 131565241 41 AGGGGCCTGGCTCAAGGGAGCGGGAGCTACCTCGGGCTCCC AGGGGCCTGGCTCAAGGGAGTGGGAGCTACCTCGGGCTCCC Direct Loss 0.955571903686587 0 0.9237703 0.91110015 prediction 0.911143807373173 Functional Loss - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565221 chr10:131565221 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_49025 0 0 6 GRSF1 POSTAR2 ENCODE chr10:131565158-131565252
64251 chr19 11560163 11560163 1 + C T PRAD 11560163 + 11560143 11560183 41 GTACCTCATGGAGCTGATGACGCCAGCCGCCTGCCCGGAGC GTACCTCATGGAGCTGATGATGCCAGCCGCCTGCCCGGAGC Direct Loss 0.955544002979396 0 0.86918855 0.2732458 prediction 0.911088005958793 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11560163 chr19:11560163 nonsynonymous SNV 0.927 4 21 hm5C_associated_SNPs_49026 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11560124-11560239
64251 chr22 44340642 44340642 1 + C G rs144730517 44340642 + 44340622 44340662 41 GGTGACCTCACAGGTGTTCACTCGAGTGCTGATGTGTCTGC GGTGACCTCACAGGTGTTCAGTCGAGTGCTGATGTGTCTGC Direct Loss 0.955513984180592 0 0.5086182 0.3985813 prediction 0.911027968361185 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44340642 chr22:44340642 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_49028 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr22:44340625-44340661
64251 chr19 46375466 46375466 1 + C G UCEC 46375466 + 46375446 46375486 41 CTCAGGACCCCTGGCACCCCCAGCACCTGCAGCCCCCCTGG CTCAGGACCCCTGGCACCCCGAGCACCTGCAGCCCCCCTGG Direct Loss 0.955501068035351 0 0.72395205 0.6477829 prediction 0.911002136070701 Functional Loss - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375466 chr19:46375466 nonsynonymous SNV 0.664 1 21 hm5C_associated_SNPs_49029 0 0 2 DDX6 POSTAR2 ENCODE chr19:46375458-46375519
64251 chr9 71395167 71395167 1 + C G PRAD 71395167 + 71395147 71395187 41 GGCGGTGGCAGCGGCGGCGGCGGGGGCCTCAGGAGGTCTAA GGCGGTGGCAGCGGCGGCGGGGGGGGCCTCAGGAGGTCTAA Direct Loss 0.955499062131047 0 0.9326935 0.93032384 prediction 0.910998124262094 Functional Loss - FAM122A ENSG00000187866 CDS Human protein_coding chr9:71395167 chr9:71395167 synonymous SNV . 0 21 hm5C_associated_SNPs_49030 0 0 1 SRSF9 POSTAR2 ENCODE chr9:71395096-71395186
64251 chr19 30303617 30303617 1 + C A rs139551337 30303617 + 30303597 30303637 41 GATGCGAAGGAGCGGGACACCATGAAGGAGGACGGCGGCGC GATGCGAAGGAGCGGGACACAATGAAGGAGGACGGCGGCGC Direct Loss 0.955497994187855 0 0.29913273 0.56316996 prediction 0.91099598837571 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30303617 chr19:30303617 synonymous SNV . 0 21 hm5C_associated_SNPs_49031 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:30303617-30303618
64251 chr9 131486769 131486769 1 + C T rs111925909 131486769 + 131486749 131486789 41 CCAGCGGCTTGCTGTGAGTCCGGGAGGCAAAATTGTACCCA CCAGCGGCTTGCTGTGAGTCTGGGAGGCAAAATTGTACCCA Direct Loss 0.955482723902852 0 0.8704754 0.76385415 prediction 0.910965447805703 Functional Loss - LOC100506100 ENSG00000223478 ncRNA_exonic Human antisense chr9:131486769 chr9:131486769 . . 0 21 hm5C_associated_SNPs_49034 0 0 1 DDX3X POSTAR2 ENCODE chr9:131486743-131486800
64251 chr17 2278872 2278872 1 + C G rs61739394 2278872 + 2278852 2278892 41 CCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCGT CCTGAGCAGGAAGCAGGACCGGGGACTCCGGGCACCGCCGT Direct Loss 0.955453438728171 0 0.9101465 0.903155 prediction 0.910906877456342 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278872 chr17:2278872 synonymous SNV . 0 21 hm5C_associated_SNPs_49038 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:2278850-2278896
64251 chr7 300063 300063 1 + C G rs139509186 300063 + 300043 300083 41 AGGACGGGATCATCCGGAGTCGGGAGCTGCTGCCACAGGAG AGGACGGGATCATCCGGAGTGGGGAGCTGCTGCCACAGGAG Direct Loss 0.955448674398498 0 0.92275554 0.88995874 prediction 0.910897348796996 Functional Loss - FAM20C ENSG00000177706 UTR3 Human protein_coding chr7:300063 chr7:300063 . . 0 21 hm5C_associated_SNPs_49039 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:300050-300074
64251 chr17 62223780 62223780 1 + C A KIRP 62223780 + 62223760 62223800 41 GAGCATGTGCTTGCGCATAACTGGGGCCGCCTGGCCTCCCG GAGCATGTGCTTGCGCATAAATGGGGCCGCCTGGCCTCCCG Direct Loss 0.955441084949492 0 0.9405995 0.9373256 prediction 0.910882169898985 Functional Loss - SNORA50C ENSG00000266402 ncRNA_exonic Human lincRNA chr17:62223780 chr17:62223780 . . 0 21 hm5C_associated_SNPs_49040 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:62223680-62223780
64251 chr16 230481 230481 1 + C A rs1005364 230481 + 230461 230501 41 GGGCGCGGCGGGTTCCAGCGCGGGGATGGCGCTGTCCGCGG GGGCGCGGCGGGTTCCAGCGAGGGGATGGCGCTGTCCGCGG Direct Loss 0.955439363693921 0 0.9085981 0.9078727 prediction 0.910878727387842 Functional Loss - HBQ1 ENSG00000086506 UTR5 Human protein_coding chr16:230481 chr16:230481 . . 0 21 hm5C_associated_SNPs_49042 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr16:230465-230504
64251 chr11 70282413 70282413 1 + C T PRAD 70282413 + 70282393 70282433 41 TCATCTCCTTCCTGAGGAGCCGGGAGGCTGGACCAGTCCCG TCATCTCCTTCCTGAGGAGCTGGGAGGCTGGACCAGTCCCG Direct Loss 0.955402649698935 0 0.9003925 0.89108187 prediction 0.910805299397869 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70282413 chr11:70282413 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_49048 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70282354-70282648
64251 chr12 72092833 72092833 1 + C T SKCM 72092833 + 72092813 72092853 41 TATTGCATTTGGTGGTTTAGCTGGATTACTAGGATCAATTG TATTGCATTTGGTGGTTTAGTTGGATTACTAGGATCAATTG Direct Loss 0.955394787540805 0 0.86698234 0.861081 prediction 0.910789575081611 Functional Loss - TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72092833 chr12:72092833 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49050 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:72092817-72092844
64251 chrX 46719498 46719498 1 + C T rs1805147 46719498 + 46719478 46719518 41 AGGATGCTCAAAGGGTTTTTCGGGAAAAAGCACCTGACTTC AGGATGCTCAAAGGGTTTTTTGGGAAAAAGCACCTGACTTC Direct Loss 0.955319215573084 0 0.9083562 0.79390097 prediction 0.910638431146167 Functional Loss - RP2 ENSG00000102218 CDS Human protein_coding chrX:46719498 chrX:46719498 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_49058 2 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:46719480-46719507
64251 chr1 229438681 229438681 1 + C T UCEC 229438681 + 229438661 229438701 41 CTTGAGACAGCTGAGGTCACCGCGGCGCGCACAGGCCCCGA CTTGAGACAGCTGAGGTCACTGCGGCGCGCACAGGCCCCGA Direct Loss 0.955275313245357 0 0.45121974 0.5517617 prediction 0.910550626490713 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229438681 chr1:229438681 nonsynonymous SNV 0.407 1 21 hm5C_associated_SNPs_49061 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:229438623-229438725
64251 chr12 124146392 124146392 1 + C T rs188194137 124146392 + 124146372 124146412 41 AGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCC AGCTCTGTCTCCTGGGTTCATGCCATTCTCCTGCCTCAGCC Direct Loss 0.955230822851343 0 0.26455516 0.08818194 prediction 0.910461645702686 Functional Loss - GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124146392 chr12:124146392 . . 0 21 hm5C_associated_SNPs_49065 0 0 3 RBM27 POSTAR2 ENCODE chr12:124146289-124146426
64251 chr19 12781095 12781095 1 + C T UCEC 12781095 + 12781075 12781115 41 GCGCAAATTCCGGGGCCACGCAGGGGTGAGTGAAAGCCTGG GCGCAAATTCCGGGGCCACGTAGGGGTGAGTGAAAGCCTGG Direct Loss 0.955223987808624 0 0.9361658 0.90752244 prediction 0.910447975617249 Functional Loss - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12781095 chr19:12781095 nonsynonymous SNV 0.987 0 21 hm5C_associated_SNPs_49067 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:12781079-12781106
64251 chr5 6739866 6739866 1 + C T UCEC 6739866 + 6739846 6739886 41 GACATAGACCTGGTGGTCTTCGGGAAATGGGAGCGTCCTCC GACATAGACCTGGTGGTCTTTGGGAAATGGGAGCGTCCTCC Direct Loss 0.955200510094158 0 0.89711154 0.79545116 prediction 0.910401020188315 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6739866 chr5:6739866 synonymous SNV . 0 21 hm5C_associated_SNPs_49070 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6739848-6739876
64251 chr16 20803630 20803630 1 + C T UCEC 20803630 + 20803610 20803650 41 GTTGCAGAGTCAGCTGTTGTCAGCAGCCCAGACCCCATCAG GTTGCAGAGTCAGCTGTTGTTAGCAGCCCAGACCCCATCAG Direct Loss 0.955177762437103 0 0.88599944 0.46332753 prediction 0.910355524874206 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20803630 chr16:20803630 synonymous SNV . 0 21 hm5C_associated_SNPs_49072 0 0 1 RPS3 POSTAR2 ENCODE chr16:20803557-20803632
64251 chr12 56625219 56625219 1 + C A BRCA 56625219 + 56625199 56625239 41 CGGCGAGAATGGGACGCTGACTGCAGGGGGCTTGGCGCGGC CGGCGAGAATGGGACGCTGAATGCAGGGGGCTTGGCGCGGC Direct Loss 0.955177417079127 0 0.82016516 0.82937264 prediction 0.910354834158255 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625219 chr12:56625219 nonsynonymous SNV 0.995 2 21 hm5C_associated_SNPs_49073 0 0 1 RBM15 POSTAR2 ENCODE chr12:56625209-56625250
64251 chr1 151536461 151536461 1 + C T SKCM 151536461 + 151536441 151536481 41 AGAGTGAGGTCCAGTACATCCAGGAGGTGGGCACCCCTTAC AGAGTGAGGTCCAGTACATCTAGGAGGTGGGCACCCCTTAC Direct Loss 0.955166921385963 0 0.8811412 0.56666255 prediction 0.910333842771927 Functional Loss - TUFT1 ENSG00000143367 CDS Human protein_coding chr1:151536461 chr1:151536461 stopgain 0.999 1 21 hm5C_associated_SNPs_49075 0 0 2 ZNF622 POSTAR2 ENCODE chr1:151536379-151536485
64251 chr12 56554431 56554431 1 + C T UCEC 56554431 + 56554411 56554451 41 GTTTGTGAGGCATATCCTGTCGGGGTGACGGGCCCATGGGG GTTTGTGAGGCATATCCTGTTGGGGTGACGGGCCCATGGGG Direct Loss 0.955118143376996 0 0.9440298 0.8281272 prediction 0.910236286753992 Functional Loss - MYL6 ENSG00000092841 CDS Human protein_coding chr12:56554431 chr12:56554431 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_49079 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr12:56554411-56554456
64251 chr8 145150838 145150838 1 + C G LUAD 145150838 + 145150818 145150858 41 GTGCGGGGCTGGCCATGGCTCTGCATTCGGCTGTGAGTGCC GTGCGGGGCTGGCCATGGCTGTGCATTCGGCTGTGAGTGCC Direct Loss 0.955105599395956 0 0.36680928 0.3169862 prediction 0.910211198791912 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150838 chr8:145150838 nonsynonymous SNV 0.868 1 21 hm5C_associated_SNPs_49081 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145150832-145150868
64251 chr6 126080424 126080424 1 + C T COAD 126080424 + 126080404 126080444 41 TCAGCACTTGCGCCACCCAGCGGGAGGCGGCGGCCATGACA TCAGCACTTGCGCCACCCAGTGGGAGGCGGCGGCCATGACA Direct Loss 0.955097965228099 0 0.93546474 0.911978 prediction 0.910195930456198 Functional Loss - HEY2 ENSG00000135547 CDS Human protein_coding chr6:126080424 chr6:126080424 nonsynonymous SNV 0.963 3 21 hm5C_associated_SNPs_49083 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:126080415-126080487
64251 chr2 231742802 231742802 1 + C T UCEC 231742802 + 231742782 231742822 41 GTGGTGGAGACGCTCATCTGCGGGGTGGTGTGAGGCCCTCC GTGGTGGAGACGCTCATCTGTGGGGTGGTGTGAGGCCCTCC Direct Loss 0.955096837382498 0 0.9238541 0.7417882 prediction 0.910193674764995 Functional Loss - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231742802 chr2:231742802 synonymous SNV . 0 21 hm5C_associated_SNPs_49084 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:231742751-231742810
64251 chr1 228336416 228336416 1 + C T rs182734829 228336416 + 228336396 228336436 41 TGAGGCTTGCTGTCTGTTCTCGGCACCCCGGGCCCATACAG TGAGGCTTGCTGTCTGTTCTTGGCACCCCGGGCCCATACAG Direct Loss 0.955084724926761 0 0.9071627 0.6580272 prediction 0.910169449853522 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228336416 chr1:228336416 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_49088 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:228336371-228336642
64251 chr22 32870769 32870769 1 + C T rs2072814 32870769 + 32870749 32870789 41 CCAGCTCTCGGGGTCGGCTCCAGGAGGCGCCCTCAGGAGAG CCAGCTCTCGGGGTCGGCTCTAGGAGGCGCCCTCAGGAGAG Direct Loss 0.955073526974166 0 0.94321644 0.9451447 prediction 0.910147053948331 Functional Loss - FBXO7 ENSG00000100225 UTR5 Human protein_coding chr22:32870769 chr22:32870769 . . 0 21 hm5C_associated_SNPs_49091 1 0 11 EIF3D POSTAR2 GSE65004,GSM1585671 chr22:32870752-32870777
64251 chr12 27654998 27654998 1 + C T rs61734420 27654998 + 27654978 27655018 41 GCCGCACCACATGGGACCTACGGGAGATGAGAGAGCCTTTC GCCGCACCACATGGGACCTATGGGAGATGAGAGAGCCTTTC Direct Loss 0.955055321448107 0 0.6516817 0.55031437 prediction 0.910110642896215 Functional Loss - SMCO2 ENSG00000165935 CDS Human protein_coding chr12:27654998 chr12:27654998 nonsynonymous SNV 0.008 1 21 hm5C_associated_SNPs_49094 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:27654990-27655016
64251 chr17 27064895 27064895 1 + C A STAD 27064895 + 27064875 27064915 41 CCACTGTCGTCAGTGTATGCCTGGGGTGGTGGGCTGGGCAC CCACTGTCGTCAGTGTATGCATGGGGTGGTGGGCTGGGCAC Direct Loss 0.955048655541022 0 0.7608298 0.54447144 prediction 0.910097311082044 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064895 chr17:27064895 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49096 0 0 1 PPIG POSTAR2 ENCODE chr17:27064845-27064934
64251 chr1 8030993 8030993 1 + C T UCEC 8030993 + 8030973 8031013 41 TACTGAAGGAGCAGGAAAACCGGAAGGGCCTGATAGCCGCC TACTGAAGGAGCAGGAAAACTGGAAGGGCCTGATAGCCGCC Direct Loss 0.955046473476421 0 0.7869038 0.40396202 prediction 0.910092946952843 Functional Loss - PARK7 ENSG00000116288 CDS Human protein_coding chr1:8030993 chr1:8030993 nonsynonymous SNV 0.093 3 21 hm5C_associated_SNPs_49097 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:8030955-8031005
64251 chr17 4857058 4857058 1 + C T LGG 4857058 + 4857038 4857078 41 GTCCTTGGCCGTGTGTAAGGCGGGAGCAGCTGAGAAGGGGG GTCCTTGGCCGTGTGTAAGGTGGGAGCAGCTGAGAAGGGGG Direct Loss 0.955033156479508 0 0.89553136 0.6891001 prediction 0.910066312959017 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4857058 chr17:4857058 nonsynonymous SNV 0.975 1 21 hm5C_associated_SNPs_49099 0 0 3 GRWD1 POSTAR2 ENCODE chr17:4857005-4857071
64251 chr17 72759559 72759559 1 + C T LUAD 72759559 + 72759539 72759579 41 GGGGACGTGGTGTCCGCCATCAGGGCTGGCGGGGACGAGAC GGGGACGTGGTGTCCGCCATTAGGGCTGGCGGGGACGAGAC Direct Loss 0.955028572926615 0 0.9138777 0.886063 prediction 0.910057145853229 Functional Loss - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72759559 chr17:72759559 synonymous SNV . 0 21 hm5C_associated_SNPs_49102 0 0 4 GRSF1 POSTAR2 ENCODE chr17:72759508-72759613
64251 chr2 219110212 219110212 1 + C G BLCA 219110212 + 219110192 219110232 41 TTAGCCACAGGGAACCTCCTCTGGAGCTGAAAGACACAGAC TTAGCCACAGGGAACCTCCTGTGGAGCTGAAAGACACAGAC Direct Loss 0.955009749465162 0 0.27741283 0.29014382 prediction 0.910019498930323 Functional Loss - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219110212 chr2:219110212 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49103 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:219110207-219110233
64251 chr12 112460165 112460165 1 + C T rs140081978 112460165 + 112460145 112460185 41 CCTGTATACGACGCCCTGGCCGGGGAGTTCATCAGGGCCTC CCTGTATACGACGCCCTGGCTGGGGAGTTCATCAGGGCCTC Direct Loss 0.954958823354343 0 0.91717577 0.79217005 prediction 0.909917646708686 Functional Loss - ERP29 ENSG00000089248 CDS Human protein_coding chr12:112460165 chr12:112460165 synonymous SNV . 0 21 hm5C_associated_SNPs_49108 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr12:112460148-112460174
64251 chr19 17531136 17531136 1 + C G BLCA 17531136 + 17531116 17531156 41 CGGTAGATCTCCTGCACCGTCGAGGGGGCACCCGCCAGCTT CGGTAGATCTCCTGCACCGTGGAGGGGGCACCCGCCAGCTT Direct Loss 0.954862596318485 0 0.9239116 0.7000663 prediction 0.90972519263697 Functional Loss - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17531136 chr19:17531136 synonymous SNV . 0 21 hm5C_associated_SNPs_49115 0 0 4 BUD13 POSTAR2 ENCODE chr19:17531099-17531161
64251 chr20 55209275 55209275 1 + C T UCEC 55209275 + 55209255 55209295 41 ATTGGGTTGAATCTTCCGGCCGGGAGGCGGAAAGCCGCTCA ATTGGGTTGAATCTTCCGGCTGGGAGGCGGAAAGCCGCTCA Direct Loss 0.95479105574939 0 0.40225273 0.2516232 prediction 0.90958211149878 Functional Loss - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55209275 chr20:55209275 synonymous SNV . 0 21 hm5C_associated_SNPs_49126 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:55209264-55209299
64251 chr18 8786015 8786015 1 + C T ESCA 8786015 + 8785995 8786035 41 GCCTGCGCCTCCGAGCCGCGCGGGAGCTGCACCGCCGCGCA GCCTGCGCCTCCGAGCCGCGTGGGAGCTGCACCGCCGCGCA Direct Loss 0.954786747404478 0 0.9299259 0.9211334 prediction 0.909573494808956 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8786015 chr18:8786015 nonsynonymous SNV 0.266 1 21 hm5C_associated_SNPs_49127 0 0 1 FXR2 POSTAR2 ENCODE chr18:8785948-8786077
64251 chr14 24773726 24773726 1 + C T rs558942777 24773726 + 24773706 24773746 41 ATGTGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTA ATGTGGCTCTGGCCTGTAGTTGCCATGGCAGCCGTGTGCTA Direct Loss 0.954770762829112 0 0.8126834 0.40844297 prediction 0.909541525658224 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24773726 chr14:24773726 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49131 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24773704-24773739
64251 chr19 18700384 18700384 1 + C T BLCA 18700384 + 18700364 18700404 41 CCAGGCCTTCGCCGCCGCCTCGCGGGAGGTGCTGGCGGTGG CCAGGCCTTCGCCGCCGCCTTGCGGGAGGTGCTGGCGGTGG Direct Loss 0.954751919588555 0 0.60516876 0.4628354 prediction 0.90950383917711 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18700384 chr19:18700384 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_49135 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18700365-18700408
64251 chr6 27114968 27114968 1 + C G LUAD 27114968 + 27114948 27114988 41 AGGCCAAGACCCGCTCTTCTCGGGCTGGGCTTCAGTTCCCC AGGCCAAGACCCGCTCTTCTGGGGCTGGGCTTCAGTTCCCC Direct Loss 0.954721905734316 0 0.9298307 0.89207983 prediction 0.909443811468632 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114968 chr6:27114968 nonsynonymous SNV 0.010 2 21 hm5C_associated_SNPs_49137 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr5 131705668 131705668 1 + C T TGCT 131705668 + 131705648 131705688 41 GGGCCTCTGAGGGCGGCATGCGGGACTACGACGAGGTGACC GGGCCTCTGAGGGCGGCATGTGGGACTACGACGAGGTGACC Direct Loss 0.954718753209092 0 0.8919252 0.8191167 prediction 0.909437506418184 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131705668 chr5:131705668 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_49139 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr5:131705653-131705676
64251 chr8 144680316 144680316 1 + C T BLCA 144680316 + 144680296 144680336 41 GCCAGTGTGTGCCGCGACTTCGGCGTGCCGGGCGGGACGCT GCCAGTGTGTGCCGCGACTTTGGCGTGCCGGGCGGGACGCT Direct Loss 0.954718686299224 0 0.9032726 0.7946012 prediction 0.909437372598448 Functional Loss - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144680316 chr8:144680316 synonymous SNV . 0 21 hm5C_associated_SNPs_49140 0 0 1 DDX3X POSTAR2 ENCODE chr8:144680295-144680367
64251 chr17 38240916 38240916 1 + C T UCEC 38240916 + 38240896 38240936 41 GTAAGCTGATTGAGCAGAACCGGGAGCGGCGGCGGAAGGAG GTAAGCTGATTGAGCAGAACTGGGAGCGGCGGCGGAAGGAG Direct Loss 0.954716799164554 0 0.8949206 0.7757177 prediction 0.909433598329107 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38240916 chr17:38240916 nonsynonymous SNV 0.995 5 21 hm5C_associated_SNPs_49141 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:38240890-38240928
64251 chr17 49338121 49338121 1 + C G rs568030637 49338121 + 49338101 49338141 41 CCGGCCGAGCGCGGCGGCCGCTGCGATTGCAGTCGCGGCGG CCGGCCGAGCGCGGCGGCCGGTGCGATTGCAGTCGCGGCGG Direct Loss 0.954716341777271 0 0.76265824 0.47625846 prediction 0.909432683554542 Functional Loss - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49338121 chr17:49338121 nonsynonymous SNV 0.018 0 21 hm5C_associated_SNPs_49142 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:49338120-49338140
64251 chr1 10471519 10471519 1 + C T COAD 10471519 + 10471499 10471539 41 TTCGTGAAGATGGTGCACAACGGGATAGAGTATGGGGACAT TTCGTGAAGATGGTGCACAATGGGATAGAGTATGGGGACAT Direct Loss 0.954683902618828 0 0.51110625 0.34568444 prediction 0.909367805237657 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10471519 chr1:10471519 synonymous SNV . 0 21 hm5C_associated_SNPs_49147 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:10471480-10471520
64251 chr22 40800334 40800334 1 + C T KIRP 40800334 + 40800314 40800354 41 GGCTGCGGTGGCAGGCCCACCTGGAGTTCACCCATAACCAC GGCTGCGGTGGCAGGCCCACTTGGAGTTCACCCATAACCAC Direct Loss 0.954681984241521 0 0.40253395 0.6872195 prediction 0.909363968483041 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40800334 chr22:40800334 synonymous SNV . 0 21 hm5C_associated_SNPs_49148 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:40800325-40800353
64251 chr22 37962530 37962530 1 + C T SKCM 37962530 + 37962510 37962550 41 GGCCGTGGCGGGGATGTCTTCGGGGACACGTCCTTCCTCAG GGCCGTGGCGGGGATGTCTTTGGGGACACGTCCTTCCTCAG Direct Loss 0.954651370596209 0 0.9542614 0.929149 prediction 0.909302741192418 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962530 chr22:37962530 synonymous SNV . 0 21 hm5C_associated_SNPs_49149 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:37962507-37962535
64251 chr20 25656453 25656453 1 - G A UCEC 25656453 - 25656433 25656473 41 AGGAGAAGCCTTATGGATGTCGGGAGTGTGGGCGAAGGTTT AGGAGAAGCCTTATGGATGTTGGGAGTGTGGGCGAAGGTTT Direct Loss 0.954587476583975 0 0.27405804 0.07231259 prediction 0.909174953167951 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656453 chr20:25656453 nonsynonymous SNV 0.065 2 21 hm5C_associated_SNPs_49152 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr20:25656416-25656454
64251 chr19 7711139 7711139 1 + C T COAD 7711139 + 7711119 7711159 41 CCTGCCCTGCCTGTAGGGCTCGGGGACCTCCAGCCGGCTGG CCTGCCCTGCCTGTAGGGCTTGGGGACCTCCAGCCGGCTGG Direct Loss 0.954563744309038 0 0.9452714 0.9128723 prediction 0.909127488618076 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711139 chr19:7711139 nonsynonymous SNV 0.042 0 21 hm5C_associated_SNPs_49157 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7711136-7711164
64251 chr19 50028001 50028001 1 + C T COAD 50028001 + 50027981 50028021 41 CTGCTGCATTGTGCAGCACGCGGGGCTGGCGCAGCCCCTCA CTGCTGCATTGTGCAGCACGTGGGGCTGGCGCAGCCCCTCA Direct Loss 0.954541347230819 0 0.9146395 0.89453447 prediction 0.909082694461639 Functional Loss - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50028001 chr19:50028001 nonsynonymous SNV 0.333 1 21 hm5C_associated_SNPs_49158 0 0 7 DDX55 POSTAR2 ENCODE chr19:50027994-50028016
64251 chr17 40719147 40719147 1 + C G ESCA 40719147 + 40719127 40719167 41 GTCCGGTGGGTACAAGATGACGGAGCCGGGCGCCTCTCCCG GTCCGGTGGGTACAAGATGAGGGAGCCGGGCGCCTCTCCCG Direct Loss 0.954526869096699 0 0.8873218 0.9147861 prediction 0.909053738193397 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40719147 chr17:40719147 nonsynonymous SNV 0.940 3 21 hm5C_associated_SNPs_49159 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:40719147-40719148
64251 chr11 120097696 120097696 1 + C T UCEC 120097696 + 120097676 120097716 41 AGGAGGATGTCCGGTTCTGGCTGGAGCAAGGTCAGCTGGGA AGGAGGATGTCCGGTTCTGGTTGGAGCAAGGTCAGCTGGGA Direct Loss 0.954500278573324 0 0.553793 0.5886672 prediction 0.909000557146649 Functional Loss - OAF ENSG00000184232 CDS Human protein_coding chr11:120097696 chr11:120097696 synonymous SNV . 0 21 hm5C_associated_SNPs_49161 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:120097665-120097702
64251 chr19 50436176 50436176 1 + C T CESC 50436176 + 50436156 50436196 41 AGTCGGCGGCTCTGAGGTACCGCCAGCGGAAGCGGGCAGAG AGTCGGCGGCTCTGAGGTACTGCCAGCGGAAGCGGGCAGAG Direct Loss 0.954493972212877 0 0.4223617 0.36970913 prediction 0.908987944425754 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50436176 chr19:50436176 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_49162 0 0 3 SRSF1 POSTAR2 ENCODE chr19:50436162-50436226
64251 chr1 154246309 154246309 1 + C T HNSC 154246309 + 154246289 154246329 41 TACGGGAGGGACAGACACTTCGGGACTCAATGCTTAAGTAT TACGGGAGGGACAGACACTTTGGGACTCAATGCTTAAGTAT Direct Loss 0.954483257232931 0 0.7559672 0.3900381 prediction 0.908966514465861 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154246309 chr1:154246309 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_49163 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154246268-154246325
64251 chr15 40751318 40751318 1 + C T GBM 40751318 + 40751298 40751338 41 TCCTAAAACTGAGCCAGGAGCGGGAGCTACCCCTGCGGCTG TCCTAAAACTGAGCCAGGAGTGGGAGCTACCCCTGCGGCTG Direct Loss 0.954433020241663 0 0.93062973 0.89740145 prediction 0.908866040483327 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751318 chr15:40751318 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_49165 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:40751300-40751320
64251 chrX 54837536 54837536 1 + C T UCEC 54837536 + 54837516 54837556 41 AGCCTGAAGCACCACCACCTCGGGATGTGGCCCTTTTGCAA AGCCTGAAGCACCACCACCTTGGGATGTGGCCCTTTTGCAA Direct Loss 0.954423012615012 0 0.8981379 0.67797494 prediction 0.908846025230023 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837536 chrX:54837536 nonsynonymous SNV 0.945 3 21 hm5C_associated_SNPs_49166 0 0 1 RPS3 POSTAR2 ENCODE chrX:54837505-54837563
64251 chr19 32971419 32971419 1 + C T PAAD 32971419 + 32971399 32971439 41 GCTACGAGCGGAGGCACCGCCGGGGCTGCCGACTCCGGGAC GCTACGAGCGGAGGCACCGCTGGGGCTGCCGACTCCGGGAC Direct Loss 0.954415570173377 0 0.9319376 0.9039954 prediction 0.908831140346755 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32971419 chr19:32971419 nonsynonymous SNV 0.862 4 21 hm5C_associated_SNPs_49168 0 0 4 DDX24 POSTAR2 ENCODE chr19:32971336-32971426
64251 chr5 33461093 33461093 1 + C A OV 33461093 + 33461073 33461113 41 ACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCA ACTTCATAGGAACGAGCTGTATGGAGCACTCACAGGACTCA Direct Loss 0.954409830400828 0 0.3296374 0.21648607 prediction 0.908819660801657 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33461093 chr5:33461093 nonsynonymous SNV 0.937 4 21 hm5C_associated_SNPs_49169 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33461011-33461151
64251 chr9 124072978 124072978 1 + C T UCEC 124072978 + 124072958 124072998 41 ACAGAAAGGAGGTGTGGCATCAGGATTCAAGCACGTGGTAC ACAGAAAGGAGGTGTGGCATTAGGATTCAAGCACGTGGTAC Direct Loss 0.954401905086673 0 0.9044943 0.8687196 prediction 0.908803810173347 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124072978 chr9:124072978 nonsynonymous SNV 0.973 4 21 hm5C_associated_SNPs_49170 0 0 5 LIN28B POSTAR2 ENCODE chr9:124072960-124073030
64251 chr16 5083833 5083833 1 - G A rs74952829 5083833 - 5083813 5083853 41 AGCGTCCGGCGGCCTCGACTCGGGGTGAGTGCAGCTCCCTG AGCGTCCGGCGGCCTCGACTTGGGGTGAGTGCAGCTCCCTG Direct Loss 0.954380227223502 0 0.9522877 0.9137078 prediction 0.908760454447003 Functional Loss - NAGPA ENSG00000103174 CDS Human protein_coding chr16:5083833 chr16:5083833 nonsynonymous SNV 0.248 0 21 hm5C_associated_SNPs_49171 0 0 2 DDX3X POSTAR2 ENCODE chr16:5083829-5083889
64251 chr17 8167548 8167548 1 + C T SKCM 8167548 + 8167528 8167568 41 AGATAGTGCTGGTGGACGATCGGGAGTGTCCTGTCAGAAGA AGATAGTGCTGGTGGACGATTGGGAGTGTCCTGTCAGAAGA Direct Loss 0.95437402994805 0 0.9264729 0.69790304 prediction 0.908748059896099 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167548 chr17:8167548 nonsynonymous SNV 0.752 3 21 hm5C_associated_SNPs_49172 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:8167529-8167553
64251 chr1 165624631 165624631 1 + C A UCEC 165624631 + 165624611 165624651 41 GCAAGCGTAGTCGAGGAGCCCTGGGGTCCATCGCCCTCCTG GCAAGCGTAGTCGAGGAGCCATGGGGTCCATCGCCCTCCTG Direct Loss 0.954346113958062 0 0.9171835 0.9091981 prediction 0.908692227916124 Functional Loss - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165624631 chr1:165624631 nonsynonymous SNV 0.993 1 21 hm5C_associated_SNPs_49177 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:165624611-165624727
64251 chr6 160218495 160218495 1 + C T UCEC 160218495 + 160218475 160218515 41 GGCACAGAGATGCTTAGAGGCGGGAATCAACTTCATGGTCT GGCACAGAGATGCTTAGAGGTGGGAATCAACTTCATGGTCT Direct Loss 0.954320842593123 0 0.8593527 0.11414391 prediction 0.908641685186245 Functional Loss - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218495 chr6:160218495 nonsynonymous SNV 0.960 4 21 hm5C_associated_SNPs_49178 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:160218441-160218499
64251 chr1 228675246 228675246 1 + C A rs536308340 228675246 + 228675226 228675266 41 GCCCTGTGCCAGCGCGCGCCCCGGGAACCGGTGCGCGCCGA GCCCTGTGCCAGCGCGCGCCACGGGAACCGGTGCGCGCCGA Direct Loss 0.954310545475778 0 0.91466415 0.77518445 prediction 0.908621090951556 Functional Loss - RNF187 ENSG00000168159 UTR5 Human protein_coding chr1:228675246 chr1:228675246 . . 0 21 hm5C_associated_SNPs_49180 0 0 6 DDX3X POSTAR2 ENCODE chr1:228675147-228675271
64251 chr11 397293 397293 1 + C T BLCA 397293 + 397273 397313 41 CACCGGAGCCGCGGGGTAGGCGGGGCAGTGCCGGGGGCCGT CACCGGAGCCGCGGGGTAGGTGGGGCAGTGCCGGGGGCCGT Direct Loss 0.954257511729184 0 0.91346335 0.9025283 prediction 0.908515023458369 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397293 chr11:397293 synonymous SNV . 0 21 hm5C_associated_SNPs_49185 0 0 2 AGGF1 POSTAR2 ENCODE chr11:397293-397339
64251 chr3 179298935 179298935 1 + C A HNSC 179298935 + 179298915 179298955 41 TCTTTTGTTGTAGGGGTTATCAGGAAACACAATGTTAGGAG TCTTTTGTTGTAGGGGTTATAAGGAAACACAATGTTAGGAG Direct Loss 0.954247047397211 0 0.9256835 0.34254783 prediction 0.908494094794423 Functional Loss - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179298935 chr3:179298935 stopgain 0.734 1 21 hm5C_associated_SNPs_49187 0 0 3 EFTUD2 POSTAR2 ENCODE chr3:179298910-179298963
64251 chr1 113616068 113616068 1 + C T UCEC 113616068 + 113616048 113616088 41 GCGTCCCGGAGGAGCAGTTGCTGGGGTGTCGATCTAGAGTG GCGTCCCGGAGGAGCAGTTGTTGGGGTGTCGATCTAGAGTG Direct Loss 0.954239049508079 0 0.92437345 0.93444467 prediction 0.908478099016159 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113616068 chr1:113616068 synonymous SNV . 0 21 hm5C_associated_SNPs_49188 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:113616051-113616088
64251 chr6 35995941 35995941 1 + C T SKCM 35995941 + 35995921 35995961 41 GCTGCCGCTGGAAAATGTCTCAGGAGAGGCCCACGTTCTAC GCTGCCGCTGGAAAATGTCTTAGGAGAGGCCCACGTTCTAC Direct Loss 0.954236648155624 0 0.9263092 0.75435466 prediction 0.908473296311247 Functional Loss - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:35995941 chr6:35995941 stopgain 0.998 1 21 hm5C_associated_SNPs_49189 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:35995938-35995977
64251 chr11 8710545 8710545 1 + C T rs550389180 8710545 + 8710525 8710565 41 CCGGTGAGTAGCTTCTACTTCCGGAGACGATGACTCCCCCG CCGGTGAGTAGCTTCTACTTTCGGAGACGATGACTCCCCCG Direct Loss 0.954190818660269 0 0.8839724 0.9182597 prediction 0.908381637320538 Functional Loss - RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8710545 chr11:8710545 . . 0 21 hm5C_associated_SNPs_49191 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr11:8710484-8710565
64251 chr2 202899847 202899847 1 + C T UCEC 202899847 + 202899827 202899867 41 GTGCACGGTGCGGGCGAGATCTGCGTGGGCCAGAACACGTC GTGCACGGTGCGGGCGAGATTTGCGTGGGCCAGAACACGTC Direct Loss 0.954186860050772 0 0.36999953 0.40739334 prediction 0.908373720101544 Functional Loss - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899847 chr2:202899847 synonymous SNV . 0 21 hm5C_associated_SNPs_49192 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:202899840-202899860
64251 chr2 85843360 85843360 1 + C G rs200244374 85843360 + 85843340 85843380 41 GAGTCTCGCGGTTCCACTCGCGGGAAGCGAGAGTCTGAGTC GAGTCTCGCGGTTCCACTCGGGGGAAGCGAGAGTCTGAGTC Direct Loss 0.954150803231453 0 0.92863125 0.952586 prediction 0.908301606462905 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85843360 chr2:85843360 synonymous SNV . 0 21 hm5C_associated_SNPs_49198 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85843313-85843368
64251 chr17 34171650 34171650 1 + C T rs145295353 34171650 + 34171630 34171670 41 GGGGGCGGCTATGGTGGAGACAGAAGTGGGGGTGGCTATGG GGGGGCGGCTATGGTGGAGATAGAAGTGGGGGTGGCTATGG Direct Loss 0.954148402765446 0 0.88185686 0.8317773 prediction 0.908296805530892 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171650 chr17:34171650 synonymous SNV . 0 21 hm5C_associated_SNPs_49199 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:34171614-34171650
64251 chr16 2867279 2867279 1 + C T STAD 2867279 + 2867259 2867299 41 GAGAGGAGGCCATGGGCGCGCGCGGGGCGCTGCTGCTGGCG GAGAGGAGGCCATGGGCGCGTGCGGGGCGCTGCTGCTGGCG Direct Loss 0.95412849013704 0 0.8856368 0.8624848 prediction 0.908256980274079 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2867279 chr16:2867279 nonsynonymous SNV 0.000 3 21 hm5C_associated_SNPs_49201 0 0 2 NCBP2 POSTAR2 ENCODE chr16:2867242-2867279
64251 chr3 150127834 150127834 1 + C T UCEC 150127834 + 150127814 150127854 41 TGGTAGTAGTGGCCTCCATGCAGGGGGCGCACGGGCCCGAG TGGTAGTAGTGGCCTCCATGTAGGGGGCGCACGGGCCCGAG Direct Loss 0.954127991485889 0 0.94474983 0.9155483 prediction 0.908255982971778 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127834 chr3:150127834 stopgain 0.999 0 21 hm5C_associated_SNPs_49202 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:150127833-150127864
64251 chr6 34741226 34741226 1 + C A UCEC 34741226 + 34741206 34741246 41 TTTGTTTTGTCCTGCAGCTCCTGGAATGAGGCCGCCCATGG TTTGTTTTGTCCTGCAGCTCATGGAATGAGGCCGCCCATGG Direct Loss 0.954120859849744 0 0.40960467 0.5515157 prediction 0.908241719699487 Functional Loss - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34741226 chr6:34741226 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49203 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:34741222-34741257
64251 chr19 1434842 1434842 1 + C T rs61735591 1434842 + 1434822 1434862 41 CCAGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTTTGG CCAGGGTCGGGGGGCCCCCCTGCCGGCGGCAGCGGCTTTGG Direct Loss 0.954109643873185 0 0.41153884 0.43544018 prediction 0.90821928774637 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434842 chr19:1434842 synonymous SNV . 0 21 hm5C_associated_SNPs_49204 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr17 55752363 55752363 1 + C G BLCA 55752363 + 55752343 55752383 41 GGCGCGGCCCGGAGGCTTCCCGGGGGCCAACAGCCCAGGAC GGCGCGGCCCGGAGGCTTCCGGGGGGCCAACAGCCCAGGAC Direct Loss 0.95407611439294 0 0.9379586 0.9403906 prediction 0.908152228785879 Functional Loss - MSI2 ENSG00000153944 CDS Human protein_coding chr17:55752363 chr17:55752363 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49208 0 0 5 DDX24 POSTAR2 ENCODE chr17:55752324-55752367
64251 chr1 184020849 184020849 1 + C A rs61738771 184020849 + 184020829 184020869 41 CGCCGCTGCTTCTGGCCGGGCGCGGGTCGTGGTGCACCACG CGCCGCTGCTTCTGGCCGGGAGCGGGTCGTGGTGCACCACG Direct Loss 0.954060452016604 0 0.8855232 0.87949324 prediction 0.908120904033207 Functional Loss - TSEN15 ENSG00000198860 UTR5 Human protein_coding chr1:184020849 chr1:184020849 . . 0 21 hm5C_associated_SNPs_49210 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr1:184020828-184020854
64251 chr9 139840170 139840170 1 + C A UCEC 139840170 + 139840150 139840190 41 ACCGGGCCGAGGCCACCACACTGCATGTGGCTCCCCAGGGC ACCGGGCCGAGGCCACCACAATGCATGTGGCTCCCCAGGGC Direct Loss 0.954055565053166 0 0.2397613 0.18816417 prediction 0.908111130106332 Functional Loss - C8G ENSG00000176919 CDS Human protein_coding chr9:139840170 chr9:139840170 nonsynonymous SNV 0.052 0 21 hm5C_associated_SNPs_49211 0 0 1 BUD13 POSTAR2 ENCODE chr9:139840112-139840172
64251 chr8 17104777 17104777 1 + C G rs146098391 17104777 + 17104757 17104797 41 AGCTGGCTTTTTCCCCTGACCAAGAGCGCCTCCTCCTCCGC AGCTGGCTTTTTCCCCTGACGAAGAGCGCCTCCTCCTCCGC Direct Loss 0.954054005997179 0 0.9044572 0.7986221 prediction 0.908108011994359 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17104777 chr8:17104777 synonymous SNV . 0 21 hm5C_associated_SNPs_49212 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:17104760-17104780
64251 chr15 65134149 65134149 1 + C G rs187639034 65134149 + 65134129 65134169 41 GCCGCCTGGCCGGGCGTAGACGCGGTGGCAGAGCCCGCGCG GCCGCCTGGCCGGGCGTAGAGGCGGTGGCAGAGCCCGCGCG Direct Loss 0.954044516633369 0 0.91390437 0.9122461 prediction 0.908089033266738 Functional Loss - PLEKHO2 ENSG00000241839;ENSG00000249240 UTR5 Human other chr15:65134149 chr15:65134149 . . 0 21 hm5C_associated_SNPs_49214 0 0 4 DDX59 POSTAR2 ENCODE chr15:65134085-65134150
64251 chr7 134632364 134632364 1 + C T UCEC 134632364 + 134632344 134632384 41 CGTCGTCGTCGCGGGGAGACCGAGAGCGAAGAGTTCGAGAA CGTCGTCGTCGCGGGGAGACTGAGAGCGAAGAGTTCGAGAA Direct Loss 0.954021271141794 0 0.8759097 0.8727282 prediction 0.908042542283588 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134632364 chr7:134632364 synonymous SNV . 0 21 hm5C_associated_SNPs_49217 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:134632363-134632364
64251 chr8 22438966 22438966 1 + C T UCEC 22438966 + 22438946 22438986 41 GTGGCCATCAACGGGGAAAGCGCGGAGGGCATGCTGCATGC GTGGCCATCAACGGGGAAAGTGCGGAGGGCATGCTGCATGC Direct Loss 0.954016883062022 0 0.90171516 0.84828764 prediction 0.908033766124045 Functional Loss - PDLIM2 ENSG00000120913 CDS Human protein_coding chr8:22438966 chr8:22438966 synonymous SNV . 0 21 hm5C_associated_SNPs_49219 0 0 1 PPIG POSTAR2 ENCODE chr8:22438936-22439040
64251 chr1 11887200 11887200 1 + C T LUSC 11887200 + 11887180 11887220 41 GCTGGAGTTGCTGCAGCTTTCGGGGCGCCAATCGGGGGTAC GCTGGAGTTGCTGCAGCTTTTGGGGCGCCAATCGGGGGTAC Direct Loss 0.95399788051194 0 0.93585443 0.8892479 prediction 0.907995761023881 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11887200 chr1:11887200 synonymous SNV . 0 21 hm5C_associated_SNPs_49227 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:11887186-11887208
64251 chr13 114150069 114150069 1 + C T BLCA 114150069 + 114150049 114150089 41 GGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGA GGACAGCTGCAGGAAGCTCTTAGGGCTTCTCCGCCAGAAGA Direct Loss 0.953989943515479 0 0.94861805 0.9075381 prediction 0.907979887030959 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150069 chr13:114150069 nonsynonymous SNV 0.255 1 21 hm5C_associated_SNPs_49228 0 0 7 DDX3X POSTAR2 ENCODE chr13:114149997-114150084
64251 chr11 65123572 65123572 1 + C T CESC 65123572 + 65123552 65123592 41 GGCCAAGGCCTGGGACGTGACGGGGCCCATGCTGCTCCACA GGCCAAGGCCTGGGACGTGATGGGGCCCATGCTGCTCCACA Direct Loss 0.953974351916783 0 0.92336714 0.7963081 prediction 0.907948703833565 Functional Loss - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123572 chr11:65123572 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_49230 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65123553-65123582
64251 chr8 38034195 38034195 1 - G A rs113937856 38034195 - 38034175 38034215 41 GGTCAGTGACTCTGGGGTCTCGGGAACCCGGAGACGAAGGA GGTCAGTGACTCTGGGGTCTTGGGAACCCGGAGACGAAGGA Direct Loss 0.953958449227558 0 0.9069984 0.8699133 prediction 0.907916898455116 Functional Loss - BAG4;LSM1 ENSG00000156735;ENSG00000175324 UTR5 Human other chr8:38034195 chr8:38034195 . . 0 21 hm5C_associated_SNPs_49233 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:38034177-38034211
64251 chr2 220098072 220098072 1 + C T SKCM 220098072 + 220098052 220098092 41 GGGCCAAGCGGGGCACAGCCCAGGGGCTTCGGGATGCCCGA GGGCCAAGCGGGGCACAGCCTAGGGGCTTCGGGATGCCCGA Direct Loss 0.953954795275855 0 0.9208814 0.8646776 prediction 0.907909590551709 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098072 chr2:220098072 stopgain 0.998 1 21 hm5C_associated_SNPs_49234 0 0 7 GRWD1 POSTAR2 ENCODE chr2:220098070-220098097
64251 chr20 61431347 61431347 1 + C T rs569739887 61431347 + 61431327 61431367 41 GCATTTGGGATCCAGGCTACCTAGAGGGGCATCGGGCCAGG GCATTTGGGATCCAGGCTACTTAGAGGGGCATCGGGCCAGG Direct Loss 0.953951579808386 0 0.43681657 0.81859803 prediction 0.907903159616773 Functional Loss - MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431347 chr20:61431347 . . 0 21 hm5C_associated_SNPs_49236 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:61431314-61431356
64251 chr11 61544867 61544867 1 + C A LUAD 61544867 + 61544847 61544887 41 GATGAGGCGCTGGTTGTGCACGGGAATGTCAAGGTCATGGG GATGAGGCGCTGGTTGTGCAAGGGAATGTCAAGGTCATGGG Direct Loss 0.953937609912043 0 0.55203396 0.4091272 prediction 0.907875219824085 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61544867 chr11:61544867 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_49237 0 0 1 GRWD1 POSTAR2 ENCODE chr11:61544863-61544919
64251 chrX 152914879 152914879 1 + C T UCEC 152914879 + 152914859 152914899 41 CATGAGCTGTGGCCTGGATTCGGAGGGTGCCACACCCCCAC CATGAGCTGTGGCCTGGATTTGGAGGGTGCCACACCCCCAC Direct Loss 0.953923456538715 0 0.9700316 0.9585899 prediction 0.90784691307743 Functional Loss - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914879 chrX:152914879 nonsynonymous SNV 0.787 2 21 hm5C_associated_SNPs_49238 0 0 2 DDX3X POSTAR2 ENCODE chrX:152914859-152914892
64251 chr19 42582913 42582913 1 + C T SKCM 42582913 + 42582893 42582933 41 GCTGGTGGGCGTGGCTGATCCCGGAGTCACTGTGGCCACAG GCTGGTGGGCGTGGCTGATCTCGGAGTCACTGTGGCCACAG Direct Loss 0.953918922799961 0 0.9392347 0.9482976 prediction 0.907837845599923 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42582913 chr19:42582913 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_49239 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:42582891-42582915
64251 chr19 54606438 54606438 1 + C A CESC 54606438 + 54606418 54606458 41 TCAGGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGA TCAGGAGTCGGCGCCTTCCTAAAGAATGCCTGGGACAAGGA Direct Loss 0.953900734049029 0 0.8774168 0.5647505 prediction 0.907801468098058 Functional Loss - NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54606438 chr19:54606438 nonsynonymous SNV 0.964 0 21 hm5C_associated_SNPs_49241 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:54606420-54606440
64251 chr17 4859297 4859297 1 + C T SKCM 4859297 + 4859277 4859317 41 CACTTGGACCTCCTTCCTCTCGGGGGTGAACATCCAGATTG CACTTGGACCTCCTTCCTCTTGGGGGTGAACATCCAGATTG Direct Loss 0.953886179002386 0 0.9634296 0.94327825 prediction 0.907772358004772 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859297 chr17:4859297 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_49243 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4859267-4859331
64251 chrX 30739014 30739014 1 + C T CESC 30739014 + 30738994 30739034 41 TGCACTGGGTGCGGCTATGGCGGCAGGGGCTGCAGAAGGAG TGCACTGGGTGCGGCTATGGTGGCAGGGGCTGCAGAAGGAG Direct Loss 0.953866918841368 0 0.4999799 0.40799093 prediction 0.907733837682735 Functional Loss - GK ENSG00000198814 CDS Human protein_coding chrX:30739014 chrX:30739014 nonsynonymous SNV 0.972 3 21 hm5C_associated_SNPs_49246 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:30739000-30739028
64251 chr2 110373255 110373255 1 + C A UCEC 110373255 + 110373235 110373275 41 TCAAGAACCTGGTGGGAGCCCTGGACGAGGGTGACGGGGAA TCAAGAACCTGGTGGGAGCCATGGACGAGGGTGACGGGGAA Direct Loss 0.953832827625317 0 0.623413 0.54776496 prediction 0.907665655250635 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373255 chr2:110373255 nonsynonymous SNV 0.982 2 21 hm5C_associated_SNPs_49252 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:110373237-110373258
64251 chr19 2877916 2877916 1 + C T STAD 2877916 + 2877896 2877936 41 CCCTATAAGTGTGGAAAATGCGGGAAAGCATTCGGTTGGCC CCCTATAAGTGTGGAAAATGTGGGAAAGCATTCGGTTGGCC Direct Loss 0.953794565189843 0 0.78244376 0.35016748 prediction 0.907589130379687 Functional Loss - ZNF556 ENSG00000172000 CDS Human protein_coding chr19:2877916 chr19:2877916 synonymous SNV . 0 21 hm5C_associated_SNPs_49259 0 0 1 GRWD1 POSTAR2 ENCODE chr19:2877866-2877964
64251 chr16 19079057 19079057 1 + C T LUAD 19079057 + 19079037 19079077 41 GGGGGCCCGGCGGTCCCTCTCAGGTAAAAGGAGGCGCGCAG GGGGGCCCGGCGGTCCCTCTTAGGTAAAAGGAGGCGCGCAG Direct Loss 0.953759191216943 0 0.9233158 0.71036315 prediction 0.907518382433886 Functional Loss - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19079057 chr16:19079057 nonsynonymous SNV 0.478 0 21 hm5C_associated_SNPs_49262 0 0 3 DDX3X POSTAR2 ENCODE chr16:19078976-19079060
64251 chr5 156738736 156738736 1 + C T STAD 156738736 + 156738716 156738756 41 GCGAGCAGATGGTTCAGATCCGGGATGACCACATCCGCTTC GCGAGCAGATGGTTCAGATCTGGGATGACCACATCCGCTTC Direct Loss 0.953737015181885 0 0.93277025 0.8985526 prediction 0.907474030363771 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156738736 chr5:156738736 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49265 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:156738725-156738761
64251 chr2 54014410 54014410 1 + C T THCA 54014410 + 54014390 54014430 41 GGGCCGGTGTTACTGGTCCTCTGCGGCCTCCTGGAGGCGTC GGGCCGGTGTTACTGGTCCTTTGCGGCCTCCTGGAGGCGTC Direct Loss 0.953705562332953 0 0.4218989 0.41272455 prediction 0.907411124665906 Functional Loss - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014410 chr2:54014410 synonymous SNV . 0 21 hm5C_associated_SNPs_49266 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr2:54014398-54014422
64251 chr1 65886400 65886400 1 + C T rs189950527 65886400 + 65886380 65886420 41 AAGCAGCCGCGGCCCCAGTTCGGGAGACATGGCGGGCGTTA AAGCAGCCGCGGCCCCAGTTTGGGAGACATGGCGGGCGTTA Direct Loss 0.953669920975001 0 0.9348383 0.9085053 prediction 0.907339841950003 Functional Loss - LEPR;LEPROT ENSG00000116678;ENSG00000213625 UTR5 Human other chr1:65886400 chr1:65886400 . . 0 21 hm5C_associated_SNPs_49268 2 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:65886385-65886410
64251 chr1 162531332 162531332 1 + C A rs182950062 162531332 + 162531312 162531352 41 CGCGTCGTCGTCTGTGCTCCCGGCGCTGACGTGTCTGGGCG CGCGTCGTCGTCTGTGCTCCAGGCGCTGACGTGTCTGGGCG Direct Loss 0.953640596935831 0 0.8862896 0.74090844 prediction 0.907281193871661 Functional Loss - UAP1 ENSG00000117143 UTR5 Human protein_coding chr1:162531332 chr1:162531332 . . 0 21 hm5C_associated_SNPs_49269 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:162531320-162531340
64251 chr19 12783866 12783866 1 + C T COAD 12783866 + 12783846 12783886 41 GCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTCC GCCGGGATGGGCAGTGCACCTTGGTGTCCAGCCTGGACTCC Direct Loss 0.953551733240291 0 0.40774935 0.34286362 prediction 0.907103466480581 Functional Loss - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12783866 chr19:12783866 synonymous SNV . 0 21 hm5C_associated_SNPs_49280 0 0 1 ZNF622 POSTAR2 ENCODE chr19:12783831-12783898
64251 chr6 52268302 52268302 1 + C T BLCA 52268302 + 52268282 52268322 41 TTGCGATTCTGGGCCTTTGCCGAGGCTGAGGCCTTGCCATG TTGCGATTCTGGGCCTTTGCTGAGGCTGAGGCCTTGCCATG Direct Loss 0.953531786525286 0 0.93981034 0.8439888 prediction 0.907063573050571 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268302 chr6:52268302 synonymous SNV . 0 21 hm5C_associated_SNPs_49283 0 0 5 DDX3X POSTAR2 ENCODE chr6:52268264-52268326
64251 chrX 118370491 118370491 1 + C T UCEC 118370491 + 118370471 118370511 41 GACCAGCCGGCGGCCAGCGGCGACAGCGACGACGACGAGCC GACCAGCCGGCGGCCAGCGGTGACAGCGACGACGACGAGCC Direct Loss 0.95352654818533 0 0.32303503 0.2984595 prediction 0.90705309637066 Functional Loss - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118370491 chrX:118370491 synonymous SNV . 0 21 hm5C_associated_SNPs_49285 0 0 7 DKC1 POSTAR2 ENCODE chrX:118370460-118370517
64251 chr19 9271086 9271086 1 + C A OV 9271086 + 9271066 9271106 41 CCTTACGAGTGCAGCGACTGCGGGAAAGCCTTCAACGACCC CCTTACGAGTGCAGCGACTGAGGGAAAGCCTTCAACGACCC Direct Loss 0.953516928737299 0 0.8938693 0.6692978 prediction 0.907033857474597 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271086 chr19:9271086 stopgain 0.226 1 21 hm5C_associated_SNPs_49286 0 0 3 RBM15 POSTAR2 ENCODE chr19:9271074-9271118
64251 chr10 71849844 71849844 1 + C T rs114922371 71849844 + 71849824 71849864 41 CTAGAATTGGCCGGCAATGCCGCGAGGGACAACAAGAAGGC CTAGAATTGGCCGGCAATGCTGCGAGGGACAACAAGAAGGC Direct Loss 0.953511347293006 0 0.48365065 0.57039434 prediction 0.907022694586012 Functional Loss - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71849844 chr10:71849844 synonymous SNV . 0 21 hm5C_associated_SNPs_49287 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:71849821-71849859
64251 chr1 227171527 227171527 1 + C T READ 227171527 + 227171507 227171547 41 CCCTGGAGTGTGACTACCAGCGAGAGGCCGCCTGTGCCCGC CCCTGGAGTGTGACTACCAGTGAGAGGCCGCCTGTGCCCGC Direct Loss 0.953464125918072 0 0.8869479 0.5523644 prediction 0.906928251836145 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171527 chr1:227171527 stopgain 0.477 1 21 hm5C_associated_SNPs_49293 1 0 4 FMR1 POSTAR2 ENCODE chr1:227171457-227171548
64251 chr8 86158082 86158082 1 + C T rs200216745 86158082 + 86158062 86158102 41 CGAGGCTCAGCTGGGGATACCGCGAGCACAACGGTGAGCGC CGAGGCTCAGCTGGGGATACTGCGAGCACAACGGTGAGCGC Direct Loss 0.953453897200275 0 0.6466016 0.55592996 prediction 0.906907794400549 Functional Loss - CA13 ENSG00000185015 CDS Human protein_coding chr8:86158082 chr8:86158082 nonsynonymous SNV 0.984 1 21 hm5C_associated_SNPs_49294 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:86158066-86158094
64251 chr22 21998365 21998365 1 + C T GBM 21998365 + 21998345 21998385 41 CGTGGGCAGCATGAGGTCCACGGCATGCCCAGTGCCAACAC CGTGGGCAGCATGAGGTCCATGGCATGCCCAGTGCCAACAC Direct Loss 0.953423624975567 0 0.40203673 0.62496036 prediction 0.906847249951133 Functional Loss - SDF2L1 ENSG00000128228 CDS Human protein_coding chr22:21998365 chr22:21998365 synonymous SNV . 0 21 hm5C_associated_SNPs_49299 0 0 2 DHX30 POSTAR2 ENCODE chr22:21998365-21998387
64251 chr16 88926359 88926359 1 + C A THCA 88926359 + 88926339 88926379 41 GTGCAACCCCTTCTACAACCCGGGGGACCGCATCCAGTCCA GTGCAACCCCTTCTACAACCAGGGGGACCGCATCCAGTCCA Direct Loss 0.953349773723957 0 0.9152378 0.9378537 prediction 0.906699547447914 Functional Loss - TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88926359 chr16:88926359 nonsynonymous SNV 0.945 5 21 hm5C_associated_SNPs_49305 0 0 5 IGF2BP2 POSTAR2 ENCODE chr16:88926300-88926381
64251 chr2 9614758 9614758 1 + C T rs571487863 9614758 + 9614738 9614778 41 TGGCCTCGCTTGTTGCTCTTCGGGGACTCCATCACCCAGGT TGGCCTCGCTTGTTGCTCTTTGGGGACTCCATCACCCAGGT Direct Loss 0.953339407975593 0 0.9419068 0.72597945 prediction 0.906678815951187 Functional Loss - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9614758 chr2:9614758 synonymous SNV . 0 21 hm5C_associated_SNPs_49307 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:9614720-9614760
64251 chr4 174292510 174292510 1 + C T SKCM 174292510 + 174292490 174292530 41 GCTGGGCCCCCGGGGGCGGCCGGGCCGGGCCCCGGGCAACT GCTGGGCCCCCGGGGGCGGCTGGGCCGGGCCCCGGGCAACT Direct Loss 0.953315348026505 0 0.88990283 0.89755654 prediction 0.906630696053011 Functional Loss - SAP30 ENSG00000164105 CDS Human protein_coding chr4:174292510 chr4:174292510 synonymous SNV . 0 21 hm5C_associated_SNPs_49309 0 0 5 DDX3X POSTAR2 ENCODE chr4:174292478-174292511
64251 chr19 50979798 50979798 1 + C G rs201542780 50979798 + 50979778 50979818 41 CTTCGCTGGTGGGAAGAAGCCGAGATGGCGGCAGCCAGCGC CTTCGCTGGTGGGAAGAAGCGGAGATGGCGGCAGCCAGCGC Direct Loss 0.953295367005453 0 0.87793124 0.91388404 prediction 0.906590734010907 Functional Loss - EMC10;FAM71E1 ENSG00000142530;ENSG00000161671 UTR5 Human other chr19:50979798 chr19:50979798 . . 0 21 hm5C_associated_SNPs_49315 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:50979780-50979800
64251 chr2 171572854 171572854 1 + C A UCEC 171572854 + 171572834 171572874 41 CTGTAGCCGCATCGGCCAGCCGGGCGCGGCGGCGCCCCCGG CTGTAGCCGCATCGGCCAGCAGGGCGCGGCGGCGCCCCCGG Direct Loss 0.953248538289639 0 0.8860187 0.90141904 prediction 0.906497076579277 Functional Loss - SP5 ENSG00000204335 CDS Human protein_coding chr2:171572854 chr2:171572854 nonsynonymous SNV 0.633 0 21 hm5C_associated_SNPs_49323 0 0 3 DDX3X POSTAR2 ENCODE chr2:171572773-171572894
64251 chr19 46195970 46195970 1 + C G STAD 46195970 + 46195950 46195990 41 GGCAAAGCGGCCATGCGTTCCGGGGGCCGCGGGCGACCCCG GGCAAAGCGGCCATGCGTTCGGGGGGCCGCGGGCGACCCCG Direct Loss 0.953211492569364 0 0.9344562 0.94189274 prediction 0.906422985138727 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46195970 chr19:46195970 synonymous SNV . 0 21 hm5C_associated_SNPs_49327 0 0 4 DDX3X POSTAR2 ENCODE chr19:46195960-46196024
64251 chr1 203276287 203276287 1 + C G DLBC 203276287 + 203276267 203276307 41 TCCAAGGGCTCCGGCTACCGCTGCATTCGCATCAACCACAA TCCAAGGGCTCCGGCTACCGGTGCATTCGCATCAACCACAA Direct Loss 0.953149356392262 0 0.16315198 0.19820973 prediction 0.906298712784523 Functional Loss - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276287 chr1:203276287 synonymous SNV . 0 21 hm5C_associated_SNPs_49333 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:203276270-203276292
64251 chr3 128445096 128445096 1 + C T rs374777610 128445096 + 128445076 128445116 41 GGAGAGCTCGGGAGAGTTCCCTGGAACCAGAACTTGGACCT GGAGAGCTCGGGAGAGTTCCTTGGAACCAGAACTTGGACCT Direct Loss 0.953139938825357 0 0.9139247 0.8395022 prediction 0.906279877650713 Functional Loss - RAB7A ENSG00000075785 UTR5 Human protein_coding chr3:128445096 chr3:128445096 . . 0 21 hm5C_associated_SNPs_49337 1 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:128445039-128445103
64251 chr9 140510182 140510182 1 - G A COAD 140510182 - 140510162 140510202 41 CCTGGGCAAGCCCCTCCACGCGCCAGCGGGTTTCTCAGCAG CCTGGGCAAGCCCCTCCACGTGCCAGCGGGTTTCTCAGCAG Direct Loss 0.953122262667527 0 0.17018932 0.07409513 prediction 0.906244525335054 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510182 chr9:140510182 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49340 0 0 2 DDX3X POSTAR2 GSE59096,GSM1427358 chr9:140510180-140510200
64251 chr12 2930756 2930756 1 + C G LUAD 2930756 + 2930736 2930776 41 GCCTCTTTGCCCTGTGCACCCTGGATGGTGAGCAATGCTAG GCCTCTTTGCCCTGTGCACCGTGGATGGTGAGCAATGCTAG Direct Loss 0.953089200410656 0 0.28694913 0.3216666 prediction 0.906178400821312 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930756 chr12:2930756 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_49347 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr12:2930742-2930769
64251 chr1 149858827 149858827 1 + C T BLCA 149858827 + 149858807 149858847 41 AACAAGCTGCTGGGCAAAGTCACCATCGCCCAGGGCGGCGT AACAAGCTGCTGGGCAAAGTTACCATCGCCCAGGGCGGCGT Direct Loss 0.953042563712991 0 0.44852227 0.3218211 prediction 0.906085127425983 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858827 chr1:149858827 synonymous SNV . 0 21 hm5C_associated_SNPs_49352 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:149858800-149858840
64251 chr14 73570053 73570053 1 + C T UCEC 73570053 + 73570033 73570073 41 AACGAGAAAAGGAGAAAGAACGGGAGCGGGAACGAGAACGG AACGAGAAAAGGAGAAAGAATGGGAGCGGGAACGAGAACGG Direct Loss 0.953026556584805 0 0.85386264 0.42687213 prediction 0.906053113169609 Functional Loss - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73570053 chr14:73570053 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_49354 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr14:73570012-73570177
64251 chr6 41889409 41889409 1 + C A rs3763273 41889409 + 41889389 41889429 41 GGGCGGGGGTCCGGGAGAAGCGGCGGGGTCGCGGGACAGGA GGGCGGGGGTCCGGGAGAAGAGGCGGGGTCGCGGGACAGGA Direct Loss 0.953009429542477 0 0.9054537 0.8971206 prediction 0.906018859084954 Functional Loss - BYSL ENSG00000112578 CDS Human protein_coding chr6:41889409 chr6:41889409 synonymous SNV . 0 21 hm5C_associated_SNPs_49357 0 0 6 GEMIN5 POSTAR2 ENCODE chr6:41889376-41889423
64251 chr3 9743591 9743591 1 + C T UVM 9743591 + 9743571 9743611 41 CCCAGTCCTTCCGGTGCCATCGGGGGCCTGCTGGAGCAATT CCCAGTCCTTCCGGTGCCATTGGGGGCCTGCTGGAGCAATT Direct Loss 0.952982841782562 0 0.94222164 0.9074247 prediction 0.905965683565125 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9743591 chr3:9743591 synonymous SNV . 0 21 hm5C_associated_SNPs_49360 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:9743576-9743606
64251 chr6 21594847 21594847 1 + C G rs140231408 21594847 + 21594827 21594867 41 ACTCGGGCGCCGGCCTCGAGCTGGGAATCGCCTCCTCCCCC ACTCGGGCGCCGGCCTCGAGGTGGGAATCGCCTCCTCCCCC Direct Loss 0.952982765891216 0 0.91377723 0.7169988 prediction 0.905965531782432 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21594847 chr6:21594847 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49361 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:21594780-21594860
64251 chr1 3397025 3397025 1 + C A COAD 3397025 + 3397005 3397045 41 GGTTCAGGGTGGCTCTATGGCGAGAGGCTCCGGGACGGAGA GGTTCAGGGTGGCTCTATGGAGAGAGGCTCCGGGACGGAGA Direct Loss 0.952976930167239 0 0.948173 0.9319334 prediction 0.905953860334477 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3397025 chr1:3397025 synonymous SNV . 0 21 hm5C_associated_SNPs_49364 0 0 2 PPIG POSTAR2 ENCODE chr1:3397010-3397072
64251 chr3 50005234 50005234 1 + C T COAD 50005234 + 50005214 50005254 41 ACATACATTCTGGGGATTTTCGGGATAGAGAAGGACCACCT ACATACATTCTGGGGATTTTTGGGATAGAGAAGGACCACCT Direct Loss 0.952940150213748 0 0.9090967 0.8759158 prediction 0.905880300427496 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005234 chr3:50005234 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49369 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50005163-50005271
64251 chr5 76115011 76115011 1 + C A rs61749608 76115011 + 76114991 76115031 41 TCGGGGCTTCCAGGAGGATGCGGAGCCCCAGCGCGGCGTGG TCGGGGCTTCCAGGAGGATGAGGAGCCCCAGCGCGGCGTGG Direct Loss 0.95292985279288 0 0.93534315 0.9244491 prediction 0.90585970558576 Functional Loss - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76115011 chr5:76115011 synonymous SNV . 0 21 hm5C_associated_SNPs_49371 0 0 5 DDX3X POSTAR2 ENCODE chr5:76114937-76115075
64251 chr15 93426125 93426125 1 + C T rs528765589 93426125 + 93426105 93426145 41 CAGGCGTTCCGCCGCGGCCGCGAGGCCCGCCGGCCGGCGGG CAGGCGTTCCGCCGCGGCCGTGAGGCCCGCCGGCCGGCGGG Direct Loss 0.952923277006584 0 0.90980464 0.8414 prediction 0.905846554013168 Functional Loss - LINC01578 ENSG00000272888 ncRNA_exonic Human processed_transcript chr15:93426125 chr15:93426125 . . 0 21 hm5C_associated_SNPs_49373 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:93426082-93426149
64251 chr17 42152399 42152399 1 + C T SKCM 42152399 + 42152379 42152419 41 CCTTTTGGCGGTTGGCTTGTCGCGAATCTTCATCTTAGCAC CCTTTTGGCGGTTGGCTTGTTGCGAATCTTCATCTTAGCAC Direct Loss 0.952911764844439 0 0.38462868 0.06294477 prediction 0.905823529688879 Functional Loss - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152399 chr17:42152399 nonsynonymous SNV 0.810 5 21 hm5C_associated_SNPs_49374 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42152376-42152400
64251 chr11 209728 209728 1 + C T UCEC 209728 + 209708 209748 41 CAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCAC CAGAGCGTGTGGGGCTGTACTGTGAGAGGAGCTTCCCCCAC Direct Loss 0.952883802741402 0 0.87482005 0.6225352 prediction 0.905767605482804 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209728 chr11:209728 nonsynonymous SNV 0.271 2 21 hm5C_associated_SNPs_49377 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr11:209708-209731
64251 chr22 30163499 30163499 1 + C T BLCA 30163499 + 30163479 30163519 41 TCTTCGAGCGCGCCTTCGATCAAGGCGCGGACGCTATCTAC TCTTCGAGCGCGCCTTCGATTAAGGCGCGGACGCTATCTAC Direct Loss 0.95287533038516 0 0.9199492 0.8047602 prediction 0.90575066077032 Functional Loss - UQCR10 ENSG00000184076 CDS Human protein_coding chr22:30163499 chr22:30163499 stopgain 0.999 0 21 hm5C_associated_SNPs_49378 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819215 chr22:30163380-30163500
64251 chr8 37963239 37963239 1 + C T rs2073351 37963239 + 37963219 37963259 41 CCGACAGTTGAGCCCAGTTCCGGGGAGGCTGAAGGCGGGTA CCGACAGTTGAGCCCAGTTCTGGGGAGGCTGAAGGCGGGTA Direct Loss 0.952871945377899 0 0.90964437 0.87157005 prediction 0.905743890755798 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37963239 chr8:37963239 synonymous SNV . 0 21 hm5C_associated_SNPs_49379 0 0 1 DDX24 POSTAR2 ENCODE chr8:37963239-37963257
64251 chr17 42148507 42148507 1 + C T BLCA 42148507 + 42148487 42148527 41 CGTGTGGGCATCGCGGTGCTCTGGATCAGCCTCATCACCGA CGTGTGGGCATCGCGGTGCTTTGGATCAGCCTCATCACCGA Direct Loss 0.952864170633791 0 0.3461992 0.32280153 prediction 0.905728341267582 Functional Loss - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42148507 chr17:42148507 synonymous SNV . 0 21 hm5C_associated_SNPs_49381 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:42148490-42148515
64251 chr1 156108491 156108491 1 + C A rs117939448 156108491 + 156108471 156108511 41 GGCAGTGGGGGTGGCAGCTTCGGGGACAATCTGGTCACCCG GGCAGTGGGGGTGGCAGCTTAGGGGACAATCTGGTCACCCG Direct Loss 0.952849889406576 0 0.93482685 0.9073322 prediction 0.905699778813152 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156108491 chr1:156108491 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_49383 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:156108467-156108496
64251 chr19 39395976 39395976 1 + C T UCEC 39395976 + 39395956 39395996 41 GCCTGCCGTGTGGGGGCACACGCCTGTGCCCGTGCCCTGCT GCCTGCCGTGTGGGGGCACATGCCTGTGCCCGTGCCCTGCT Direct Loss 0.952832684766672 0 0.18674746 0.25547957 prediction 0.905665369533345 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395976 chr19:39395976 synonymous SNV . 0 21 hm5C_associated_SNPs_49384 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39395956-39395977
64251 chr1 109241968 109241968 1 + C T UCEC 109241968 + 109241948 109241988 41 GAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGC GAAGATCCCGAAGTATTGACTGGGGGTTAGAACGCAGGCGC Direct Loss 0.952808680084426 0 0.9417686 0.9148948 prediction 0.905617360168852 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241968 chr1:109241968 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_49387 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:109241930-109242006
64251 chr2 86439855 86439855 1 + C T rs370852770 86439855 + 86439835 86439875 41 GCTGACAGGCACATAACTTACGGGAAAGGGAATTTCATACA GCTGACAGGCACATAACTTATGGGAAAGGGAATTTCATACA Direct Loss 0.952790707271706 0 0.8113618 0.61551535 prediction 0.905581414543412 Functional Loss - MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439855 chr2:86439855 . . 0 21 hm5C_associated_SNPs_49389 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:86439814-86439864
64251 chr17 40818365 40818365 1 + C T SKCM 40818365 + 40818345 40818385 41 ACAAGAGCCTGCAGAGGATCCGGGAACGGAAGTTGGCCAAC ACAAGAGCCTGCAGAGGATCTGGGAACGGAAGTTGGCCAAC Direct Loss 0.952765384942294 0 0.8833325 0.64506876 prediction 0.905530769884589 Functional Loss - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40818365 chr17:40818365 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_49395 0 0 2 LSM11 POSTAR2 ENCODE chr17:40818340-40818367
64251 chr19 14142711 14142711 1 + C T BLCA 14142711 + 14142691 14142731 41 GGAGGCAGGGGCGCCCCTTTCTGGCTGTGGCCGCTGCCCAA GGAGGCAGGGGCGCCCCTTTTTGGCTGTGGCCGCTGCCCAA Direct Loss 0.952732901773516 0 0.88447595 0.8453809 prediction 0.905465803547032 Functional Loss - IL27RA ENSG00000104998 CDS Human protein_coding chr19:14142711 chr19:14142711 synonymous SNV . 0 21 hm5C_associated_SNPs_49399 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:14142710-14142711
64251 chr16 66997261 66997261 1 + C T UCEC 66997261 + 66997241 66997281 41 CACAGCCCTGGGAGGGTGTGCGGGATGCCAGCACTGCGCCC CACAGCCCTGGGAGGGTGTGTGGGATGCCAGCACTGCGCCC Direct Loss 0.952718301806189 0 0.9258838 0.9039644 prediction 0.905436603612379 Functional Loss - CES3 ENSG00000172828 CDS Human protein_coding chr16:66997261 chr16:66997261 nonsynonymous SNV 0.067 1 21 hm5C_associated_SNPs_49400 0 0 1 SND1 POSTAR2 ENCODE chr16:66997194-66997289
64251 chr10 74034579 74034579 1 + C G rs143474945 74034579 + 74034559 74034599 41 GGCCCAGGCGCGGCTGGGCTCTCGACGCCCTGCGCGCCTGC GGCCCAGGCGCGGCTGGGCTGTCGACGCCCTGCGCGCCTGC Direct Loss 0.952714066519251 0 0.91605145 0.8016237 prediction 0.905428133038502 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034579 chr10:74034579 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_49401 0 0 18 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:74034560-74034582
64251 chr2 28615879 28615879 1 + C G rs189740937 28615879 + 28615859 28615899 41 GCCCGTCCGGGAGCGGGCTCCGGGGAAGGGGTGCGGGTCTG GCCCGTCCGGGAGCGGGCTCGGGGGAAGGGGTGCGGGTCTG Direct Loss 0.952713464871926 0 0.9260952 0.92505467 prediction 0.905426929743852 Functional Loss - FLJ31356 ENSG00000229951 ncRNA_intronic Human antisense chr2:28615879 chr2:28615879 . . 0 21 hm5C_associated_SNPs_49402 0 0 8 DDX3X POSTAR2 ENCODE chr2:28615829-28615882
64251 chr9 114423992 114423992 1 + C A READ 114423992 + 114423972 114424012 41 GAGGCTGGCGTGGAGAGGATCAAGGTGCGGGCCCCGGGTAC GAGGCTGGCGTGGAGAGGATAAAGGTGCGGGCCCCGGGTAC Direct Loss 0.952699362880811 0 0.90110314 0.83945274 prediction 0.905398725761622 Functional Loss - GNG10 ENSG00000242616 CDS Human protein_coding chr9:114423992 chr9:114423992 synonymous SNV . 0 21 hm5C_associated_SNPs_49403 0 0 2 DDX3X POSTAR2 ENCODE chr9:114423963-114423999
64251 chr19 13879421 13879421 1 + C A KIRC 13879421 + 13879401 13879441 41 GGCCGCCTGGAGCATGCCTTCTGCACAGAGACCCGGCCCTA GGCCGCCTGGAGCATGCCTTATGCACAGAGACCCGGCCCTA Direct Loss 0.952681152244231 0 0.51572114 0.5996015 prediction 0.905362304488461 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879421 chr19:13879421 nonsynonymous SNV 0.575 2 21 hm5C_associated_SNPs_49407 0 0 2 PPIG POSTAR2 ENCODE chr19:13879360-13879437
64251 chr7 94293511 94293511 1 + C T BLCA 94293511 + 94293491 94293531 41 AGGGCCTCAGCGACCACATTCAGGAGGAGCTCTCCCACCTC AGGGCCTCAGCGACCACATTTAGGAGGAGCTCTCCCACCTC Direct Loss 0.952659093873974 0 0.9312309 0.91272295 prediction 0.905318187747949 Functional Loss - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293511 chr7:94293511 stopgain 0.029 0 21 hm5C_associated_SNPs_49408 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:94293426-94293541
64251 chr17 43226680 43226680 1 + C A LUAD 43226680 + 43226660 43226700 41 GGCGCGGAGGAGCGGGTGCCCGAGGAGGACAGTAGGTGGCA GGCGCGGAGGAGCGGGTGCCAGAGGAGGACAGTAGGTGGCA Direct Loss 0.952650427347786 0 0.9057614 0.91391945 prediction 0.905300854695573 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226680 chr17:43226680 synonymous SNV . 0 21 hm5C_associated_SNPs_49409 0 0 7 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:43226660-43226680
64251 chr1 15755221 15755221 1 + C G rs77815160 15755221 + 15755201 15755241 41 TGCAGTCCACCTTTAAGTAGCGGGGGCTGCAGCCGACCGCC TGCAGTCCACCTTTAAGTAGGGGGGGCTGCAGCCGACCGCC Direct Loss 0.952627579700969 0 0.9406198 0.9115457 prediction 0.905255159401938 Functional Loss - EFHD2 ENSG00000142634 UTR3 Human protein_coding chr1:15755221 chr1:15755221 . . 0 21 hm5C_associated_SNPs_49413 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:15755217-15755250
64251 chr1 78511898 78511898 1 + C A rs201220553 78511898 + 78511878 78511918 41 GCGTCCCGGGCTCCCGCACGCAGGCTGGTCTTCCACGCGCA GCGTCCCGGGCTCCCGCACGAAGGCTGGTCTTCCACGCGCA Direct Loss 0.952621521471592 0 0.9212289 0.92011046 prediction 0.905243042943184 Functional Loss - GIPC2 ENSG00000137960 CDS Human protein_coding chr1:78511898 chr1:78511898 synonymous SNV . 0 21 hm5C_associated_SNPs_49415 0 0 1 DDX3X POSTAR2 ENCODE chr1:78511884-78511975
64251 chr2 128186330 128186330 1 + C T LUSC 128186330 + 128186310 128186350 41 GGGGACCGGCAGGATGCCTGCGAGGGCGACAGTGGGGGGCC GGGGACCGGCAGGATGCCTGTGAGGGCGACAGTGGGGGGCC Direct Loss 0.952605441257348 0 0.91779745 0.90111935 prediction 0.905210882514696 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128186330 chr2:128186330 synonymous SNV . 0 21 hm5C_associated_SNPs_49416 0 0 4 EIF3H POSTAR2 ENCODE chr2:128186294-128186352
64251 chr2 37319356 37319356 1 + C G BLCA 37319356 + 37319336 37319376 41 ATGAAGCTAGAAGGAGATCTCAGAAGAAGCCAGCGAGCCTG ATGAAGCTAGAAGGAGATCTGAGAAGAAGCCAGCGAGCCTG Direct Loss 0.952597902163821 0 0.8417088 0.26420283 prediction 0.905195804327642 Functional Loss - GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37319356 chr2:37319356 synonymous SNV . 0 21 hm5C_associated_SNPs_49417 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:37319338-37319374
64251 chr14 21458675 21458675 1 + C T UCEC 21458675 + 21458655 21458695 41 CAAACACTGACCAGTTATCTCTGGAGCAGACATTTGCCTGT CAAACACTGACCAGTTATCTTTGGAGCAGACATTTGCCTGT Direct Loss 0.952595325667133 0 0.51840645 0.45274383 prediction 0.905190651334265 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21458675 chr14:21458675 synonymous SNV . 0 21 hm5C_associated_SNPs_49419 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:21458657-21458685
64251 chr3 16346702 16346702 1 + C T rs114879427 16346702 + 16346682 16346722 41 TAACTGGTGAAGGCAGTCTGCGGGGGAGGACACCTAAAGGT TAACTGGTGAAGGCAGTCTGTGGGGGAGGACACCTAAAGGT Direct Loss 0.952576874062315 0 0.9115735 0.88711095 prediction 0.90515374812463 Functional Loss - OXNAD1 ENSG00000154814 UTR3 Human protein_coding chr3:16346702 chr3:16346702 . . 0 21 hm5C_associated_SNPs_49424 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:16346683-16346710
64251 chr5 157161639 157161639 1 + C T UCEC 157161639 + 157161619 157161659 41 CCAGCTATGTGTTTTATTGGCGGGATTACTTTGAGGACCAG CCAGCTATGTGTTTTATTGGTGGGATTACTTTGAGGACCAG Direct Loss 0.95256028825452 0 0.89987636 0.55760765 prediction 0.90512057650904 Functional Loss - THG1L ENSG00000113272;ENSG00000268432 CDS Human other chr5:157161639 chr5:157161639 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_49425 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:157161633-157161656
64251 chrX 101382207 101382207 1 + C A LUAD 101382207 + 101382187 101382227 41 CCAGCTGAGGATGATATACCCAGGAAAGCCAAAAGAAAAAC CCAGCTGAGGATGATATACCAAGGAAAGCCAAAAGAAAAAC Direct Loss 0.952555626100135 0 0.8872366 0.8235594 prediction 0.90511125220027 Functional Loss - TCEAL2 ENSG00000184905 CDS Human protein_coding chrX:101382207 chrX:101382207 synonymous SNV . 0 21 hm5C_associated_SNPs_49426 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:101382179-101382210
64251 chr14 104199060 104199060 1 + C T STAD 104199060 + 104199040 104199080 41 GTGGAGGACGTGACTGTGGGCAGGAGGCAGGCGGTGGCGTG GTGGAGGACGTGACTGTGGGTAGGAGGCAGGCGGTGGCGTG Direct Loss 0.952521343892261 0 0.8819536 0.84714335 prediction 0.905042687784521 Functional Loss - ZFYVE21 ENSG00000100711 CDS Human protein_coding chr14:104199060 chr14:104199060 synonymous SNV . 0 21 hm5C_associated_SNPs_49428 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:104199051-104199066
64251 chr13 88329002 88329002 1 + C T BLCA 88329002 + 88328982 88329022 41 ATGATCCAGGACCGCGCTTTCGGGGATCTCACCAACCTGAG ATGATCCAGGACCGCGCTTTTGGGGATCTCACCAACCTGAG Direct Loss 0.952520603962522 0 0.9586992 0.93670106 prediction 0.905041207925043 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329002 chr13:88329002 synonymous SNV . 0 21 hm5C_associated_SNPs_49429 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:88328984-88329025
64251 chr13 40229938 40229938 1 + C T UCEC 40229938 + 40229918 40229958 41 GGCCTCAACAATGGGGCAGGCGGGACCTCGGCGACGACCTG GGCCTCAACAATGGGGCAGGTGGGACCTCGGCGACGACCTG Direct Loss 0.95243481492759 0 0.90435684 0.89407694 prediction 0.904869629855179 Functional Loss - COG6 ENSG00000133103 CDS Human protein_coding chr13:40229938 chr13:40229938 synonymous SNV . 0 21 hm5C_associated_SNPs_49438 0 0 3 DDX3X POSTAR2 ENCODE chr13:40229855-40229978
64251 chr1 32050855 32050855 1 + C T CESC 32050855 + 32050835 32050875 41 GAGCCATGGGTCGGGGCAAGCGCCAGGCCACTGCCCACTGC GAGCCATGGGTCGGGGCAAGTGCCAGGCCACTGCCCACTGC Direct Loss 0.952419571673798 0 0.51428634 0.33937788 prediction 0.904839143347595 Functional Loss - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32050855 chr1:32050855 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_49442 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:32050840-32050860
64251 chr16 28962631 28962631 1 + C T rs564246714 28962631 + 28962611 28962651 41 AGGGGAGGACAGGCGGCCCGCAGGACCCCCGCGGGAGCCGG AGGGGAGGACAGGCGGCCCGTAGGACCCCCGCGGGAGCCGG Direct Loss 0.952345309236073 0 0.76679325 0.43546426 prediction 0.904690618472146 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28962631 chr16:28962631 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_49449 0 0 5 FASTKD2 POSTAR2 ENCODE chr16:28962628-28962694
64251 chr1 32655677 32655677 1 + C T UCEC 32655677 + 32655657 32655697 41 AAGAAGGTGTGCAGCGGGCCCGGGAGGAGGAGGAGAAGCGC AAGAAGGTGTGCAGCGGGCCTGGGAGGAGGAGGAGAAGCGC Direct Loss 0.952295045406061 0 0.90292776 0.8752878 prediction 0.904590090812123 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32655677 chr1:32655677 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_49456 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32655657-32655692
64251 chr7 140380866 140380866 1 + C T ESCA 140380866 + 140380846 140380886 41 GTGTGCCTGTGTCCAGTTACCAGCAGGCAGGAATTCCCGTG GTGTGCCTGTGTCCAGTTACTAGCAGGCAGGAATTCCCGTG Direct Loss 0.952275030482351 0 0.43636814 0.3289734 prediction 0.904550060964702 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140380866 chr7:140380866 stopgain 1.000 1 21 hm5C_associated_SNPs_49458 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:140380859-140380895
64251 chr17 80525974 80525974 1 + C A BLCA 80525974 + 80525954 80525994 41 CCCCCGGGGAGCGGGGTCTTCAGGGTACAAGGTGGGCCGAG CCCCCGGGGAGCGGGGTCTTAAGGGTACAAGGTGGGCCGAG Direct Loss 0.952250688719019 0 0.9392226 0.9303805 prediction 0.904501377438038 Functional Loss - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80525974 chr17:80525974 stopgain 0.998 1 21 hm5C_associated_SNPs_49460 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:80525964-80525992
64251 chr17 21075495 21075495 1 + C G LUAD 21075495 + 21075475 21075515 41 GGTGATCACAGGCGCCACCTCAGGGCTGGGCAAAGGTGGGT GGTGATCACAGGCGCCACCTGAGGGCTGGGCAAAGGTGGGT Direct Loss 0.952225873008509 0 0.9105354 0.8901245 prediction 0.904451746017018 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21075495 chr17:21075495 stopgain 0.870 1 21 hm5C_associated_SNPs_49464 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:21075470-21075497
64251 chr3 150127539 150127539 1 + C G rs61734436 150127539 + 150127519 150127559 41 GCCCCCGCCCCCGGAGCACCCGGCGGCCCCCAGCTCGCGGG GCCCCCGCCCCCGGAGCACCGGGCGGCCCCCAGCTCGCGGG Direct Loss 0.952161830596648 0 0.5668564 0.7463591 prediction 0.904323661193295 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127539 chr3:150127539 synonymous SNV . 0 21 hm5C_associated_SNPs_49470 0 0 1 RBM15 POSTAR2 ENCODE chr3:150127508-150127557
64251 chr21 45213238 45213238 1 + C T HNSC 45213238 + 45213218 45213258 41 CCTTCTGGCAGACCATGAATCGCGAGTGGACGGGCATTGAC CCTTCTGGCAGACCATGAATTGCGAGTGGACGGGCATTGAC Direct Loss 0.952134512165486 0 0.9246253 0.39958936 prediction 0.904269024330971 Functional Loss - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45213238 chr21:45213238 nonsynonymous SNV 0.409 3 21 hm5C_associated_SNPs_49473 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45213199-45213239
64251 chr2 170607585 170607585 1 + C G rs538169308 170607585 + 170607565 170607605 41 ACTGCAAATCACAGACAGGCCTAGATACAGATCCCCTCACC ACTGCAAATCACAGACAGGCGTAGATACAGATCCCCTCACC Direct Loss 0.95211223656933 0 0.14025396 0.15931314 prediction 0.904224473138659 Functional Loss - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 UTR3 Human protein_coding chr2:170607585 chr2:170607585 . . 0 21 hm5C_associated_SNPs_49478 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:170607576-170607638
64251 chrX 153994567 153994567 1 + C T UCEC 153994567 + 153994547 153994587 41 CCTGGATTCGACGGATACTTCGGGTGGAGAAGACAGGGCAC CCTGGATTCGACGGATACTTTGGGTGGAGAAGACAGGGCAC Direct Loss 0.952055747006441 0 0.92825544 0.8893933 prediction 0.904111494012881 Functional Loss - DKC1 ENSG00000130826 CDS Human protein_coding chrX:153994567 chrX:153994567 nonsynonymous SNV 0.722 5 21 hm5C_associated_SNPs_49486 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:153994507-153994587
64251 chr18 8783852 8783852 1 + C T UCEC 8783852 + 8783832 8783872 41 ACATGCGGGGCCAGCAGGAGCGGGAGGGCCCGGGTCGGGAC ACATGCGGGGCCAGCAGGAGTGGGAGGGCCCGGGTCGGGAC Direct Loss 0.952043614708724 0 0.92084706 0.91057193 prediction 0.904087229417448 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8783852 chr18:8783852 nonsynonymous SNV 0.015 3 21 hm5C_associated_SNPs_49489 0 0 3 SLTM POSTAR2 ENCODE chr18:8783820-8783877
64251 chr2 67624799 67624799 1 + C G rs76623705 67624799 + 67624779 67624819 41 CTGTGCAGTAAAAGTAACCCCGAGGGTGAGACGTCGGCAGC CTGTGCAGTAAAAGTAACCCGGAGGGTGAGACGTCGGCAGC Direct Loss 0.951942545927117 0 0.8947583 0.7879375 prediction 0.903885091854233 Functional Loss - ETAA1 ENSG00000143971 CDS Human protein_coding chr2:67624799 chr2:67624799 synonymous SNV . 0 21 hm5C_associated_SNPs_49498 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:67624792-67624811
64251 chr11 65733926 65733926 1 + C A LUAD 65733926 + 65733906 65733946 41 CGGCTGATGGCCTGCGGGAGCGGGAGCTGGAGGAGATCCGG CGGCTGATGGCCTGCGGGAGAGGGAGCTGGAGGAGATCCGG Direct Loss 0.951867215255406 0 0.9300845 0.9237555 prediction 0.903734430510812 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733926 chr11:65733926 synonymous SNV . 0 21 hm5C_associated_SNPs_49505 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:65733925-65733926
64251 chr5 131607069 131607069 1 + C T UCEC 131607069 + 131607049 131607089 41 GCTCCGAGGTGTACAGGATGCTGCGGGAGCCAGCCGAGCCC GCTCCGAGGTGTACAGGATGTTGCGGGAGCCAGCCGAGCCC Direct Loss 0.951847911212691 0 0.4672003 0.54210633 prediction 0.903695822425382 Functional Loss - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607069 chr5:131607069 synonymous SNV . 0 21 hm5C_associated_SNPs_49506 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr22 29627634 29627634 1 + C T UCEC 29627634 + 29627614 29627654 41 ACCGGCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGGG ACCGGCCCCAAGGGAGATGCTGGCAGTCGGGGCCCAATGGG Direct Loss 0.951844328022634 0 0.9119241 0.8621255 prediction 0.903688656045267 Functional Loss - EMID1 ENSG00000186998 CDS Human protein_coding chr22:29627634 chr22:29627634 synonymous SNV . 0 21 hm5C_associated_SNPs_49507 0 0 1 RPS5 POSTAR2 ENCODE chr22:29627578-29627654
64251 chr12 118464799 118464799 1 + C G BLCA 118464799 + 118464779 118464819 41 TCCTGGACTGGATGTTGAATCAAGATTTCACCACAGCCTAC TCCTGGACTGGATGTTGAATGAAGATTTCACCACAGCCTAC Direct Loss 0.951836661071418 0 0.5828427 0.4080518 prediction 0.903673322142836 Functional Loss - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118464799 chr12:118464799 nonsynonymous SNV 0.991 0 21 hm5C_associated_SNPs_49508 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:118464760-118464822
64251 chr19 44768478 44768478 1 + C A HNSC 44768478 + 44768458 44768498 41 TTTTCCCAGTTCTGCCTTCCCAGGACCCTGCCCTTCCCCAG TTTTCCCAGTTCTGCCTTCCAAGGACCCTGCCCTTCCCCAG Direct Loss 0.951829324301319 0 0.70116216 0.3031088 prediction 0.903658648602639 Functional Loss - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44768478 chr19:44768478 nonsynonymous SNV 0.009 0 21 hm5C_associated_SNPs_49510 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr19:44768460-44768480
64251 chr15 84237393 84237393 1 + C T COAD 84237393 + 84237373 84237413 41 GGGGACTGTATGCTGAAATACGGGAAGGAGCTCGGGGAAGA GGGGACTGTATGCTGAAATATGGGAAGGAGCTCGGGGAAGA Direct Loss 0.951818862756509 0 0.47587302 0.35575643 prediction 0.903637725513018 Functional Loss - SH3GL3 ENSG00000140600 CDS Human protein_coding chr15:84237393 chr15:84237393 synonymous SNV . 0 21 hm5C_associated_SNPs_49512 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:84237389-84237417
64251 chr5 140475031 140475031 1 + C T BLCA 140475031 + 140475011 140475051 41 ACCCTCACAGCGCTAGATGGCGGGAGTCCACCCAGGTCCGG ACCCTCACAGCGCTAGATGGTGGGAGTCCACCCAGGTCCGG Direct Loss 0.951805610878511 0 0.91667455 0.85936356 prediction 0.903611221757022 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475031 chr5:140475031 synonymous SNV . 0 21 hm5C_associated_SNPs_49515 0 0 2 SND1 POSTAR2 ENCODE chr5:140475016-140475062
64251 chr10 94452231 94452231 1 + C T STAD 94452231 + 94452211 94452251 41 ATCGAGCTGGAGAAGAAATTCGAGACGCAGAAATATCTCTC ATCGAGCTGGAGAAGAAATTTGAGACGCAGAAATATCTCTC Direct Loss 0.951798819348346 0 0.2635951 0.22572246 prediction 0.903597638696693 Functional Loss - HHEX ENSG00000152804 CDS Human protein_coding chr10:94452231 chr10:94452231 synonymous SNV . 0 21 hm5C_associated_SNPs_49516 0 0 8 BUD13 POSTAR2 ENCODE chr10:94452229-94452383
64251 chr10 12131171 12131171 1 + C T LIHC 12131171 + 12131151 12131191 41 CCGTGGCCGTGGGCAAAACTCGCGGCAGGCAGCAGTCTCGC CCGTGGCCGTGGGCAAAACTTGCGGCAGGCAGCAGTCTCGC Direct Loss 0.951771811296643 0 0.92130756 0.87963223 prediction 0.903543622593286 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131171 chr10:12131171 nonsynonymous SNV 0.945 4 21 hm5C_associated_SNPs_49521 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:12131170-12131171
64251 chr1 1417625 1417625 1 + C T STAD 1417625 + 1417605 1417645 41 GGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAG GGGAGAATGCAGACATCATCTGCGAGCAGATCCGCCTGAAG Direct Loss 0.951743800719173 0 0.37296292 0.34029067 prediction 0.903487601438345 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417625 chr1:1417625 nonsynonymous SNV 0.673 4 21 hm5C_associated_SNPs_49524 0 0 5 DDX24 POSTAR2 ENCODE chr1:1417536-1417669
64251 chrX 154444803 154444803 1 + C T UCEC 154444803 + 154444783 154444823 41 TGGCAAAGGAGAAATGGCCACAGGGAATGGGCGGCGGCTCC TGGCAAAGGAGAAATGGCCATAGGGAATGGGCGGCGGCTCC Direct Loss 0.951736689316311 0 0.8698938 0.76727664 prediction 0.903473378632622 Functional Loss - VBP1 ENSG00000155959 CDS Human protein_coding chrX:154444803 chrX:154444803 nonsynonymous SNV 0.053 0 21 hm5C_associated_SNPs_49525 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:154444760-154444820
64251 chrX 11783862 11783862 1 + C T CESC 11783862 + 11783842 11783882 41 GAAAAGAGTAGGTTCATTCTCGGGTGCCCCAGGCCGGGGAG GAAAAGAGTAGGTTCATTCTTGGGTGCCCCAGGCCGGGGAG Direct Loss 0.951706411334102 0 0.94497395 0.8990233 prediction 0.903412822668205 Functional Loss - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11783862 chrX:11783862 synonymous SNV . 0 21 hm5C_associated_SNPs_49528 0 0 3 HNRNPC POSTAR2 SRX1438577 chrX:11783849-11783869
64251 chr8 99956684 99956684 1 + C G rs181731116 99956684 + 99956664 99956704 41 TGGGGCAGCCTGGGGAGGGACGCGGGCGGGGACGGAGCTCG TGGGGCAGCCTGGGGAGGGAGGCGGGCGGGGACGGAGCTCG Direct Loss 0.951694991614978 0 0.8980335 0.9098835 prediction 0.903389983229955 Functional Loss - OSR2 ENSG00000164920 UTR5 Human protein_coding chr8:99956684 chr8:99956684 . . 0 21 hm5C_associated_SNPs_49531 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:99956683-99956684
64251 chr7 106797680 106797680 1 + C T SKCM 106797680 + 106797660 106797700 41 AGTAGAAATCGCTCGATGCTCGCGGGGACAGTACTTTGGAG AGTAGAAATCGCTCGATGCTTGCGGGGACAGTACTTTGGAG Direct Loss 0.951694699630625 0 0.9339063 0.8258951 prediction 0.90338939926125 Functional Loss - PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106797680 chr7:106797680 nonsynonymous SNV 0.516 1 21 hm5C_associated_SNPs_49532 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:106797670-106797690
64251 chr1 160313209 160313209 1 + C T LUSC 160313209 + 160313189 160313229 41 GGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAGTC GGCTACGGCAGGGGGTGGCTTTGGGGCTGACCCGGGAAGTC Direct Loss 0.951691320435559 0 0.89533967 0.8912216 prediction 0.903382640871118 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160313209 chr1:160313209 nonsynonymous SNV 0.993 1 21 hm5C_associated_SNPs_49533 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:160313196-160313222
64251 chr4 39448254 39448254 1 + C T COAD 39448254 + 39448234 39448274 41 GGGCTGAAGCTTGGCATCTCCGCGATGGTCACCCTGTATTA GGGCTGAAGCTTGGCATCTCTGCGATGGTCACCCTGTATTA Direct Loss 0.951657016593081 0 0.4991654 0.39732438 prediction 0.903314033186162 Functional Loss - KLB ENSG00000134962 CDS Human protein_coding chr4:39448254 chr4:39448254 synonymous SNV . 0 21 hm5C_associated_SNPs_49537 0 0 2 BUD13 POSTAR2 ENCODE chr4:39448246-39448328
64251 chr6 137143735 137143735 1 + C G rs528948146 137143735 + 137143715 137143755 41 CTGCCTGGTCTCTCTAACCGCGCCAGTGTGCCTCCGACTCG CTGCCTGGTCTCTCTAACCGGGCCAGTGTGCCTCCGACTCG Direct Loss 0.951655448868236 0 0.8983344 0.9129169 prediction 0.903310897736473 Functional Loss - PEX7 ENSG00000112357 UTR5 Human protein_coding chr6:137143735 chr6:137143735 . . 0 21 hm5C_associated_SNPs_49538 0 0 1 DDX3X POSTAR2 ENCODE chr6:137143701-137143868
64251 chr3 143691673 143691673 1 + C T rs6798911 143691673 + 143691653 143691693 41 CGGTGGAGGGCTGGTCGGACCTGGTGCACTGCCCCTCGCAG CGGTGGAGGGCTGGTCGGACTTGGTGCACTGCCCCTCGCAG Direct Loss 0.951651324176435 0 0.5568649 0.53867984 prediction 0.90330264835287 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691673 chr3:143691673 synonymous SNV . 0 21 hm5C_associated_SNPs_49539 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr3:143691660-143691680
64251 chr11 10794137 10794137 1 + C T COAD 10794137 + 10794117 10794157 41 GCAAACAAGATGAAGAAGAGCGGGAGCTGCGGGCCAAGCAA GCAAACAAGATGAAGAAGAGTGGGAGCTGCGGGCCAAGCAA Direct Loss 0.951608778870491 0 0.92072594 0.908285 prediction 0.903217557740981 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10794137 chr11:10794137 nonsynonymous SNV 0.961 3 21 hm5C_associated_SNPs_49542 0 0 5 FMR1 POSTAR2 ENCODE chr11:10794079-10794177
64251 chr21 37518699 37518699 1 + C A KIRC 37518699 + 37518679 37518719 41 ATGGATGGGAAAGACAGCATCAGGACTGTGGAGGAGGGGGC ATGGATGGGAAAGACAGCATAAGGACTGTGGAGGAGGGGGC Direct Loss 0.951564950297685 0 0.85358375 0.23119119 prediction 0.90312990059537 Functional Loss - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37518699 chr21:37518699 synonymous SNV . 0 21 hm5C_associated_SNPs_49550 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr21:37518682-37518706
64251 chr17 41570293 41570293 1 + C T COAD 41570293 + 41570273 41570313 41 AGCGGAATCTGGATAGATGGCGGGATAAGCATGTGGACCGC AGCGGAATCTGGATAGATGGTGGGATAAGCATGTGGACCGC Direct Loss 0.951553656469453 0 0.88701785 0.5640378 prediction 0.903107312938907 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570293 chr17:41570293 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_49553 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41570264-41570293
64251 chr14 50360887 50360887 1 + C T CESC 50360887 + 50360867 50360907 41 AACTGGGCCTGACCCGGATTCGGGACAGGAACTGGTATGTG AACTGGGCCTGACCCGGATTTGGGACAGGAACTGGTATGTG Direct Loss 0.951549803375771 0 0.9334934 0.86013615 prediction 0.903099606751541 Functional Loss - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360887 chr14:50360887 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49554 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:50360720-50360960
64251 chr17 46972581 46972581 1 + C T GBM 46972581 + 46972561 46972601 41 TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCAGCC TCCAGACCAGTGTTGTCTCCTGGGACATTGACACAGCAGCC Direct Loss 0.951510808938926 0 0.8530924 0.39765787 prediction 0.903021617877851 Functional Loss - ATP5G1 ENSG00000159199 CDS Human protein_coding chr17:46972581 chr17:46972581 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_49557 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr17:46972572-46972620
64251 chr21 46363700 46363700 1 + C T BLCA 46363700 + 46363680 46363720 41 GTGAGGAGTGTCACTTCCGTCAGGAGAGGTGAGGCAGGCTC GTGAGGAGTGTCACTTCCGTTAGGAGAGGTGAGGCAGGCTC Direct Loss 0.951507038345524 0 0.9074169 0.7853532 prediction 0.903014076691047 Functional Loss - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46363700 chr21:46363700 synonymous SNV . 0 21 hm5C_associated_SNPs_49558 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:46363691-46363721
64251 chr14 23315028 23315028 1 + C T LUAD 23315028 + 23315008 23315048 41 GGACTGGATGGGCTGCCCATCGGGAGGCCGGCCGGATGAGG GGACTGGATGGGCTGCCCATTGGGAGGCCGGCCGGATGAGG Direct Loss 0.951484089622926 0 0.9176537 0.8123529 prediction 0.902968179245852 Functional Loss - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23315028 chr14:23315028 nonsynonymous SNV 0.388 0 21 hm5C_associated_SNPs_49563 0 0 2 DDX24 POSTAR2 ENCODE chr14:23314972-23315036
64251 chr9 80923441 80923441 1 + C T UCEC 80923441 + 80923421 80923461 41 TCCGAGAGTGCCCCTCGGTCCTGGAATACAAGGTGCAGGCT TCCGAGAGTGCCCCTCGGTCTTGGAATACAAGGTGCAGGCT Direct Loss 0.951456191658403 0 0.21483475 0.22934932 prediction 0.902912383316805 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80923441 chr9:80923441 synonymous SNV . 0 21 hm5C_associated_SNPs_49565 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr9:80923327-80923454
64251 chr12 110019245 110019245 1 + C T UCEC 110019245 + 110019225 110019265 41 GTGTGGTCGGAGCTGCCCCCCGGGGCGGGCTTGGGCTCCAG GTGTGGTCGGAGCTGCCCCCTGGGGCGGGCTTGGGCTCCAG Direct Loss 0.951447780166307 0 0.9096056 0.8207653 prediction 0.902895560332615 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110019245 chr12:110019245 synonymous SNV . 0 21 hm5C_associated_SNPs_49566 0 0 1 METAP2 POSTAR2 ENCODE chr12:110019199-110019280
64251 chr20 61593988 61593988 1 + C T LUSC 61593988 + 61593968 61594008 41 CTTTGCAGGACGCTGCTGACCGGGGCGGTGGGCTCCCTGCT CTTTGCAGGACGCTGCTGACTGGGGCGGTGGGCTCCCTGCT Direct Loss 0.9514263686192 0 0.93150795 0.9048822 prediction 0.9028527372384 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61593988 chr20:61593988 synonymous SNV . 0 21 hm5C_associated_SNPs_49569 0 0 5 BUD13 POSTAR2 ENCODE chr20:61593961-61594017
64251 chr19 39423062 39423062 1 + C T LUAD 39423062 + 39423042 39423082 41 GGCCCCCCAAGCGGCCGCCTCGGAAGCTGGGCCCCACGGAA GGCCCCCCAAGCGGCCGCCTTGGAAGCTGGGCCCCACGGAA Direct Loss 0.951354155377201 0 0.90272844 0.67867196 prediction 0.902708310754403 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423062 chr19:39423062 nonsynonymous SNV 0.000 2 21 hm5C_associated_SNPs_49576 0 0 3 DDX3X POSTAR2 ENCODE chr19:39423004-39423069
64251 chr6 27115050 27115050 1 + C T HNSC 27115050 + 27115030 27115070 41 CGAGCGGGTTGGAGCCGGCGCGCCAGTGTACCTGGCTGCGG CGAGCGGGTTGGAGCCGGCGTGCCAGTGTACCTGGCTGCGG Direct Loss 0.951317423438683 0 0.52916193 0.26681817 prediction 0.902634846877366 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115050 chr6:27115050 nonsynonymous SNV 0.185 3 21 hm5C_associated_SNPs_49580 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27114964-27115114
64251 chrX 77359778 77359778 1 + C T rs192936390 77359778 + 77359758 77359798 41 CAAGCCTCCGGAGCGCACGTCGGCAGTCGGCTCCCTCGTTG CAAGCCTCCGGAGCGCACGTTGGCAGTCGGCTCCCTCGTTG Direct Loss 0.951311146211357 0 0.8177844 0.4510976 prediction 0.902622292422715 Functional Loss - PGK1 ENSG00000102144 UTR5 Human protein_coding chrX:77359778 chrX:77359778 . . 0 21 hm5C_associated_SNPs_49581 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:77359720-77359820
64251 chr2 25042458 25042458 1 - G A rs112196584 25042458 - 25042438 25042478 41 GCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACA GCCTTTGCCGCTGGGCTTTCTGGGACTGTGGAGGGAGCACA Direct Loss 0.95130076177104 0 0.90368927 0.81244516 prediction 0.90260152354208 Functional Loss - ADCY3;CENPO ENSG00000138031;ENSG00000138092 UTR3 Human other chr2:25042458 chr2:25042458 . . 0 21 hm5C_associated_SNPs_49582 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:25042430-25042474
64251 chrX 70444364 70444364 1 + C T KIRP 70444364 + 70444344 70444384 41 CTGCGCCGCAGCCCTGGCACCGGGGCTGGGCTGGCTGAAAA CTGCGCCGCAGCCCTGGCACTGGGGCTGGGCTGGCTGAAAA Direct Loss 0.951291511931614 0 0.89936996 0.47274023 prediction 0.902583023863228 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444364 chrX:70444364 synonymous SNV . 0 21 hm5C_associated_SNPs_49583 0 0 4 RPS3 POSTAR2 ENCODE chrX:70444347-70444381
64251 chr1 109289353 109289353 1 + C A rs1124427 109289353 + 109289333 109289373 41 TGGCTGCTGCTCCGCAGTGTCGGGAAGATGGCGCCGCCGGT TGGCTGCTGCTCCGCAGTGTAGGGAAGATGGCGCCGCCGGT Direct Loss 0.951287398807654 0 0.9114386 0.87453175 prediction 0.902574797615307 Functional Loss - STXBP3 ENSG00000116266 UTR5 Human protein_coding chr1:109289353 chr1:109289353 . . 0 21 hm5C_associated_SNPs_49584 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:109289340-109289360
64251 chr9 4793123 4793123 1 + C G UCEC 4793123 + 4793103 4793143 41 GGCGCACTCCCTCAGCTACGCAGGGTGCAACTTCTTGCGCC GGCGCACTCCCTCAGCTACGGAGGGTGCAACTTCTTGCGCC Direct Loss 0.951273032905622 0 0.9341271 0.9232266 prediction 0.902546065811244 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4793123 chr9:4793123 nonsynonymous SNV 0.960 0 21 hm5C_associated_SNPs_49585 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:4793100-4793130
64251 chr16 31718407 31718407 1 + C A rs565961747 31718407 + 31718387 31718427 41 GGGAGAGAAGTGAGGGAAGCCGGCAGTCCCAGCCCTGTCAG GGGAGAGAAGTGAGGGAAGCAGGCAGTCCCAGCCCTGTCAG Direct Loss 0.951257439600286 0 0.9153917 0.89926946 prediction 0.902514879200572 Functional Loss - CLUHP3 ENSG00000131797 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:31718407 chr16:31718407 . . 0 21 hm5C_associated_SNPs_49586 0 0 7 DDX55 POSTAR2 ENCODE chr16:31718381-31718438
64251 chr19 11040133 11040133 1 + C T SARC 11040133 + 11040113 11040153 41 GGGTGCTGGGGGCCTGGATGCGCGACTGCGACATCAACGAC GGGTGCTGGGGGCCTGGATGTGCGACTGCGACATCAACGAC Direct Loss 0.95124525532643 0 0.34704983 0.26435465 prediction 0.90249051065286 Functional Loss - TIMM29 ENSG00000142444 CDS Human protein_coding chr19:11040133 chr19:11040133 nonsynonymous SNV 0.164 2 21 hm5C_associated_SNPs_49588 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:11040120-11040140
64251 chr2 177017871 177017871 1 + C G rs1063657 177017871 + 177017851 177017891 41 GATGGGGATGGGAGGGGGGGCGGGATTCTCTCTCTAAGTAT GATGGGGATGGGAGGGGGGGGGGGATTCTCTCTCTAAGTAT Direct Loss 0.951215739833494 0 0.90341794 0.90730655 prediction 0.902431479666987 Functional Loss - HOXD4 ENSG00000170166 UTR3 Human protein_coding chr2:177017871 chr2:177017871 . . 0 21 hm5C_associated_SNPs_49591 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:177017860-177017900
64251 chr14 100182183 100182183 1 + C T STAD 100182183 + 100182163 100182203 41 GGAAGCAGCTCCGGGAGGTCCGGGAGAGCATTCGCTTCCTG GGAAGCAGCTCCGGGAGGTCTGGGAGAGCATTCGCTTCCTG Direct Loss 0.951177990003852 0 0.9177474 0.9159864 prediction 0.902355980007704 Functional Loss - CYP46A1 ENSG00000036530 CDS Human protein_coding chr14:100182183 chr14:100182183 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_49594 0 0 2 DICER1 POSTAR2 GSE55333,GSM1334287 chr14:100182180-100182200
64251 chr1 45267308 45267308 1 + C T BLCA 45267308 + 45267288 45267328 41 CTGCAGTCCCTGGCCCACATCTGGAAGGCCCGGCACACCCT CTGCAGTCCCTGGCCCACATTTGGAAGGCCCGGCACACCCT Direct Loss 0.951173566421995 0 0.86879706 0.8256973 prediction 0.90234713284399 Functional Loss - PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267308 chr1:45267308 synonymous SNV . 0 21 hm5C_associated_SNPs_49595 0 0 1 PRPF8 POSTAR2 ENCODE chr1:45267259-45267329
64251 chr5 162896698 162896698 1 + C T UCEC 162896698 + 162896678 162896718 41 AGGACAGGCGGATCCAGGATCTGGAAACTGAGTTGGAAAAG AGGACAGGCGGATCCAGGATTTGGAAACTGAGTTGGAAAAG Direct Loss 0.951160264218072 0 0.8599122 0.7828352 prediction 0.902320528436144 Functional Loss - HMMR ENSG00000072571 CDS Human protein_coding chr5:162896698 chr5:162896698 synonymous SNV . 0 21 hm5C_associated_SNPs_49596 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr5:162896662-162896698
64251 chr16 69963428 69963428 1 + C T HNSC 69963428 + 69963408 69963448 41 AGTGGGAGGATCCCCGGACCCAGGGGTAAGGACTTGGGCTG AGTGGGAGGATCCCCGGACCTAGGGGTAAGGACTTGGGCTG Direct Loss 0.951124492602401 0 0.9362266 0.90403867 prediction 0.902248985204801 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69963428 chr16:69963428 stopgain 0.978 1 21 hm5C_associated_SNPs_49600 0 0 2 PRPF8 POSTAR2 ENCODE chr16:69963423-69963520
64251 chr1 244218085 244218085 1 + C T LUSC 244218085 + 244218065 244218105 41 CGGTCTTGAGGGAGCTGGACCGGGAGGACAAAGCCAGTGAT CGGTCTTGAGGGAGCTGGACTGGGAGGACAAAGCCAGTGAT Direct Loss 0.95103191137855 0 0.86574876 0.758477 prediction 0.9020638227571 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218085 chr1:244218085 nonsynonymous SNV 0.986 3 21 hm5C_associated_SNPs_49602 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:244218061-244218085
64251 chr22 44370668 44370668 1 + C T rs73434653 44370668 + 44370648 44370688 41 ACCCACAGTGGTCGGGCTCCCGGGAGCTTAGCCACCCTTCT ACCCACAGTGGTCGGGCTCCTGGGAGCTTAGCCACCCTTCT Direct Loss 0.951011930972714 0 0.9441681 0.9216455 prediction 0.902023861945428 Functional Loss - SAMM50 ENSG00000100347 intronic Human protein_coding chr22:44370668 chr22:44370668 . . 0 21 hm5C_associated_SNPs_49606 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:44370643-44370676
64251 chr1 162762467 162762467 1 + C A CESC 162762467 + 162762447 162762487 41 AGTGGCATTGGCCTGGCCCTCTGCAAGCGGCTGCTGGCGGA AGTGGCATTGGCCTGGCCCTATGCAAGCGGCTGCTGGCGGA Direct Loss 0.951011258241569 0 0.3871622 0.15125364 prediction 0.902022516483139 Functional Loss - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162762467 chr1:162762467 synonymous SNV . 0 21 hm5C_associated_SNPs_49607 0 0 3 DDX3X POSTAR2 ENCODE chr1:162762452-162762469
64251 chr22 17983959 17983959 1 + C T COAD 17983959 + 17983939 17983979 41 GACAGGTCACCGAGAGTTTTCGCGAGAGGACCTCCCTTCGA GACAGGTCACCGAGAGTTTTTGCGAGAGGACCTCCCTTCGA Direct Loss 0.950976672052574 0 0.90664196 0.65281266 prediction 0.901953344105147 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:17983959 chr22:17983959 nonsynonymous SNV 0.902 4 21 hm5C_associated_SNPs_49610 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:17983931-17983964
64251 chr4 103790183 103790183 1 + C A rs548270434 103790183 + 103790163 103790203 41 GCTTCCGCTCCCGGCGCAGGCGCGGCAGCTTGGCCAGAGCG GCTTCCGCTCCCGGCGCAGGAGCGGCAGCTTGGCCAGAGCG Direct Loss 0.950963740786999 0 0.8822123 0.89548963 prediction 0.901927481573998 Functional Loss - CISD2 ENSG00000145354 UTR5 Human protein_coding chr4:103790183 chr4:103790183 . . 0 21 hm5C_associated_SNPs_49612 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:103790179-103790204
64251 chr19 56203242 56203242 1 + C T SKCM 56203242 + 56203222 56203262 41 GCTGCCCCCACCTCGGACCCCTGGGGCGGCCCCCCTGTCCC GCTGCCCCCACCTCGGACCCTTGGGGCGGCCCCCCTGTCCC Direct Loss 0.950958773069961 0 0.9170138 0.8783299 prediction 0.901917546139921 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56203242 chr19:56203242 synonymous SNV . 0 21 hm5C_associated_SNPs_49614 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:56203203-56203243
64251 chr13 113765066 113765066 1 + C A UCEC 113765066 + 113765046 113765086 41 GCCGGCGCGCCAACGCGTTCCTGGAGGAGCTGCGGCCGGGC GCCGGCGCGCCAACGCGTTCATGGAGGAGCTGCGGCCGGGC Direct Loss 0.950931757681112 0 0.8799926 0.90521204 prediction 0.901863515362225 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113765066 chr13:113765066 nonsynonymous SNV 0.474 2 21 hm5C_associated_SNPs_49618 0 0 3 EFTUD2 POSTAR2 ENCODE chr13:113764989-113765066
64251 chr8 128750803 128750803 1 + C T DLBC 128750803 + 128750783 128750823 41 GCTTCTCCACGGCCGACCAGCTGGAGATGGTGACCGAGCTG GCTTCTCCACGGCCGACCAGTTGGAGATGGTGACCGAGCTG Direct Loss 0.95092246554177 0 0.8872478 0.8468641 prediction 0.90184493108354 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128750803 chr8:128750803 synonymous SNV . 0 21 hm5C_associated_SNPs_49619 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:128750800-128750820
64251 chr8 145745377 145745377 1 + C A STAD 145745377 + 145745357 145745397 41 AGAGCATGCAGGCTGTTATCCTGGGGCTGACTGCCCGGCTC AGAGCATGCAGGCTGTTATCATGGGGCTGACTGCCCGGCTC Direct Loss 0.950918882663841 0 0.9423547 0.94973135 prediction 0.901837765327682 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745377 chr8:145745377 nonsynonymous SNV 0.990 1 21 hm5C_associated_SNPs_49620 0 0 1 DDX3X POSTAR2 ENCODE chr8:145745349-145745398
64251 chr3 113666878 113666878 1 + C T rs538204217 113666878 + 113666858 113666898 41 TCACAGGTGGGCGGCTGCGGCGAGGGAGCGGCCGAGCGGAG TCACAGGTGGGCGGCTGCGGTGAGGGAGCGGCCGAGCGGAG Direct Loss 0.950915998650089 0 0.8882663 0.8663627 prediction 0.901831997300178 Functional Loss - ZDHHC23 ENSG00000184307 UTR5 Human protein_coding chr3:113666878 chr3:113666878 . . 0 21 hm5C_associated_SNPs_49621 0 0 1 DDX3X POSTAR2 ENCODE chr3:113666833-113666901
64251 chr20 55099997 55099997 1 + C T UCEC 55099997 + 55099977 55100017 41 ACGGAGAGCACTTTCGGATTCGGCAGAATCTACCAGAGCAC ACGGAGAGCACTTTCGGATTTGGCAGAATCTACCAGAGCAC Direct Loss 0.950862641624788 0 0.69729114 0.5682073 prediction 0.901725283249576 Functional Loss - FAM209A ENSG00000124103 CDS Human protein_coding chr20:55099997 chr20:55099997 nonsynonymous SNV 0.010 3 21 hm5C_associated_SNPs_49629 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:55099992-55100030
64251 chr17 34948363 34948363 1 + C T rs551715766 34948363 + 34948343 34948383 41 AAGCAGGTCGGCGGCGGCGGCAGGAGAGCGGCCGGGCGTCA AAGCAGGTCGGCGGCGGCGGTAGGAGAGCGGCCGGGCGTCA Direct Loss 0.950821011322831 0 0.90644944 0.8987506 prediction 0.901642022645662 Functional Loss - DHRS11 ENSG00000108272 UTR5 Human other chr17:34948363 chr17:34948363 . . 0 21 hm5C_associated_SNPs_49637 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:34948363-34948364
64251 chr20 42695404 42695404 1 + C T rs149010935 42695404 + 42695384 42695424 41 CTCTGAGTTCCCCAGCAGCTCGGGATCCTGCTCACCTGGCC CTCTGAGTTCCCCAGCAGCTTGGGATCCTGCTCACCTGGCC Direct Loss 0.950819375350944 0 0.916584 0.5283399 prediction 0.901638750701889 Functional Loss - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695404 chr20:42695404 nonsynonymous SNV 0.573 0 21 hm5C_associated_SNPs_49638 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr11 30344725 30344725 1 + C T rs4071559 30344725 + 30344705 30344745 41 ACTCGCATCTTGCCCGAAGCCGGGCGGAGGAGAGCTCAAGC ACTCGCATCTTGCCCGAAGCTGGGCGGAGGAGAGCTCAAGC Direct Loss 0.95081909280178 0 0.76104295 0.5865371 prediction 0.90163818560356 Functional Loss - ARL14EP ENSG00000152219 UTR5 Human protein_coding chr11:30344725 chr11:30344725 . . 0 21 hm5C_associated_SNPs_49640 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:30344697-30344750
64251 chr7 75508359 75508359 1 + C T rs186561790 75508359 + 75508339 75508379 41 AGGCGGAAGGAGCAGAGGACCGGCAGCCGGCGTCGAGGCGG AGGCGGAAGGAGCAGAGGACTGGCAGCCGGCGTCGAGGCGG Direct Loss 0.950812970362416 0 0.41730773 0.41571507 prediction 0.901625940724832 Functional Loss - RHBDD2 ENSG00000005486 UTR5 Human protein_coding chr7:75508359 chr7:75508359 . . 0 21 hm5C_associated_SNPs_49641 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:75508340-75508360
64251 chr16 31213960 31213960 1 + C A LUSC 31213960 + 31213940 31213980 41 CTTGAACTTCTTGAGCTCCTCGGCGGTCAGGTTCTCCAGCG CTTGAACTTCTTGAGCTCCTAGGCGGTCAGGTTCTCCAGCG Direct Loss 0.950804110529141 0 0.78648925 0.38696647 prediction 0.901608221058281 Functional Loss - PYCARD ENSG00000103490;ENSG00000261359 CDS Human other chr16:31213960 chr16:31213960 stopgain 0.058 0 21 hm5C_associated_SNPs_49643 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:31213891-31213983
64251 chr11 637451 637451 1 + C T rs192669730 637451 + 637431 637471 41 CTGCTCATCGGCGCGGTGCTCGCGGGGAACTCGCTCGTGTG CTGCTCATCGGCGCGGTGCTTGCGGGGAACTCGCTCGTGTG Direct Loss 0.950798475195897 0 0.9538235 0.94116545 prediction 0.901596950391794 Functional Loss - DRD4 ENSG00000069696 CDS Human protein_coding chr11:637451 chr11:637451 synonymous SNV . 0 21 hm5C_associated_SNPs_49645 0 0 10 DDX24 POSTAR2 ENCODE chr11:637449-637501
64251 chr17 57287809 57287809 1 + C T HNSC 57287809 + 57287789 57287829 41 ACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCAG ACCGAACTGAGGCAGGCTCCTAGGACTACAGCCTTCTGCAG Direct Loss 0.950773449595697 0 0.9043062 0.8013856 prediction 0.901546899191395 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287809 chr17:57287809 stopgain 0.973 0 21 hm5C_associated_SNPs_49647 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:57287788-57287814
64251 chr17 26370108 26370108 1 + C T UCEC 26370108 + 26370088 26370128 41 TGTACAGCAGCACACCTCTTCGGCAGCTGCGGCAGCCGCAG TGTACAGCAGCACACCTCTTTGGCAGCTGCGGCAGCCGCAG Direct Loss 0.950719344189809 0 0.890396 0.43889827 prediction 0.901438688379619 Functional Loss - NLK ENSG00000087095 CDS Human protein_coding chr17:26370108 chr17:26370108 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49650 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:26370085-26370123
64251 chr22 21272283 21272283 1 + C T BLCA 21272283 + 21272263 21272303 41 GGTATATGGGGCCGGTGTCTCGCCAGGAGGCGCAGACCCGG GGTATATGGGGCCGGTGTCTTGCCAGGAGGCGCAGACCCGG Direct Loss 0.950710796166559 0 0.88951117 0.6110509 prediction 0.901421592333117 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21272283 chr22:21272283 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_49651 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:21272264-21272284
64251 chr19 17612097 17612097 1 + C A LUAD 17612097 + 17612077 17612117 41 TCCAGGAGTGGAGGGTAAGGCAGGGATGGCGGCCGTCGCAG TCCAGGAGTGGAGGGTAAGGAAGGGATGGCGGCCGTCGCAG Direct Loss 0.950672674024193 0 0.93192863 0.9062146 prediction 0.901345348048387 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17612097 chr19:17612097 nonsynonymous SNV 0.915 3 21 hm5C_associated_SNPs_49656 0 0 2 BUD13 POSTAR2 ENCODE chr19:17612045-17612143
64251 chr16 31230697 31230697 1 + C A rs115885262 31230697 + 31230677 31230717 41 CACTGGAGGGCTCCTTGGACCGCGAGGCAGAGCGTGTACGG CACTGGAGGGCTCCTTGGACAGCGAGGCAGAGCGTGTACGG Direct Loss 0.950617724089367 0 0.45109516 0.38791126 prediction 0.901235448178735 Functional Loss - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31230697 chr16:31230697 nonsynonymous SNV 0.340 0 21 hm5C_associated_SNPs_49662 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:31230664-31230705
64251 chr3 128997702 128997702 1 + C A rs116769111 128997702 + 128997682 128997722 41 GTGGCCAAAGCGGAGCGGAGCGGGGGTGAGGAGAGTCGAGG GTGGCCAAAGCGGAGCGGAGAGGGGGTGAGGAGAGTCGAGG Direct Loss 0.950610480535679 0 0.9100498 0.8917975 prediction 0.901220961071358 Functional Loss - HMCES ENSG00000183624 UTR5 Human protein_coding chr3:128997702 chr3:128997702 . . 0 21 hm5C_associated_SNPs_49664 0 0 3 HNRNPU POSTAR2 GSE34491,GSM850170 chr3:128997700-128997720
64251 chr17 7214723 7214723 1 + C T HNSC 7214723 + 7214703 7214743 41 TCCAGGACAGCGGGGAGGTACGAGAGGACCTTCGTCTCCCT TCCAGGACAGCGGGGAGGTATGAGAGGACCTTCGTCTCCCT Direct Loss 0.950599362513809 0 0.9076462 0.89308023 prediction 0.901198725027617 Functional Loss - EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214723 chr17:7214723 stopgain 0.999 1 21 hm5C_associated_SNPs_49665 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7214666-7214724
64251 chr14 73572661 73572661 1 + C A LUSC 73572661 + 73572641 73572681 41 AACGGGAGCGAGAGAGAGAGCGAGAGAGGGAACGGGAGCGA AACGGGAGCGAGAGAGAGAGAGAGAGAGGGAACGGGAGCGA Direct Loss 0.950586405952123 0 0.82105386 0.80882317 prediction 0.901172811904246 Functional Loss - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73572661 chr14:73572661 synonymous SNV . 0 21 hm5C_associated_SNPs_49666 0 0 14 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:73572660-73572740
64251 chr14 94568272 94568272 1 + C T READ 94568272 + 94568252 94568292 41 TCTACAGCAGCCATTGCCAACGGGGGCGGAGTTGCTGCTGG TCTACAGCAGCCATTGCCAATGGGGGCGGAGTTGCTGCTGG Direct Loss 0.950570014275043 0 0.9371587 0.84126025 prediction 0.901140028550086 Functional Loss - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568272 chr14:94568272 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_49670 0 0 1 LARP4 POSTAR2 ENCODE chr14:94568270-94568359
64251 chrX 99917344 99917344 1 + C T SKCM 99917344 + 99917324 99917364 41 CCTGCCAAGCCGTCGTTGGTCTGGAACTGCCTACTGCAGGC CCTGCCAAGCCGTCGTTGGTTTGGAACTGCCTACTGCAGGC Direct Loss 0.950565153636318 0 0.32167953 0.2501206 prediction 0.901130307272635 Functional Loss - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99917344 chrX:99917344 nonsynonymous SNV 0.993 4 21 hm5C_associated_SNPs_49671 0 0 1 PPIG POSTAR2 ENCODE chrX:99917291-99917362
64251 chr11 33090282 33090282 1 + C G STAD 33090282 + 33090262 33090302 41 CCATCGGGGAGAAGGTGTGCCTGGAGGTGAGCAGCTGCCTC CCATCGGGGAGAAGGTGTGCGTGGAGGTGAGCAGCTGCCTC Direct Loss 0.950554807898008 0 0.43852496 0.6508327 prediction 0.901109615796016 Functional Loss - TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33090282 chr11:33090282 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_49673 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:33090257-33090285
64251 chr19 36120554 36120554 1 + C G HNSC 36120554 + 36120534 36120574 41 CCTGTGATCCGCCCAATTATCGCGACCAACACATACCAGCA CCTGTGATCCGCCCAATTATGGCGACCAACACATACCAGCA Direct Loss 0.950552234463621 0 0.8757111 0.68866247 prediction 0.901104468927243 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120554 chr19:36120554 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_49674 0 0 11 RTCB POSTAR2 GSE38201,GSM936508 chr19:36120531-36120555
64251 chr15 44751319 44751319 1 + C G LUAD 44751319 + 44751299 44751339 41 GGTTGATGATAGCCTGCCTTCAGGAGGAGAAAAACCATCGA GGTTGATGATAGCCTGCCTTGAGGAGGAGAAAAACCATCGA Direct Loss 0.950548668225979 0 0.8774259 0.40546602 prediction 0.901097336451959 Functional Loss - CTDSPL2 ENSG00000137770 CDS Human protein_coding chr15:44751319 chr15:44751319 stopgain 1.000 0 21 hm5C_associated_SNPs_49675 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr15:44751295-44751325
64251 chr11 75480099 75480099 1 + C T SARC 75480099 + 75480079 75480119 41 GAGCGTCAGGCCGAGGCTGACCGGAGCCAGCGCTCTCACGG GAGCGTCAGGCCGAGGCTGATCGGAGCCAGCGCTCTCACGG Direct Loss 0.950508085100902 0 0.9180788 0.937102 prediction 0.901016170201804 Functional Loss - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480099 chr11:75480099 synonymous SNV . 0 21 hm5C_associated_SNPs_49677 0 0 2 DDX3X POSTAR2 ENCODE chr11:75480036-75480105
64251 chr6 116600781 116600781 1 - G A PAAD 116600781 - 116600761 116600801 41 TCAGAGGAGGGGGGCGTACCCCAGGATGCCGCGGGCCGTGG TCAGAGGAGGGGGGCGTACCTCAGGATGCCGCGGGCCGTGG Direct Loss 0.950502610103358 0 0.8852904 0.8981742 prediction 0.901005220206716 Functional Loss - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600781 chr6:116600781 synonymous SNV . 0 21 hm5C_associated_SNPs_49679 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:116600747-116600785
64251 chr5 76714121 76714121 1 + C T UCEC 76714121 + 76714101 76714141 41 AGTCCATGACGTGGATCACCCGGGAAGGACCAACTCTTTCC AGTCCATGACGTGGATCACCTGGGAAGGACCAACTCTTTCC Direct Loss 0.950500217676715 0 0.87701654 0.7939353 prediction 0.901000435353429 Functional Loss - PDE8B ENSG00000113231 CDS Human protein_coding chr5:76714121 chr5:76714121 nonsynonymous SNV 0.922 4 21 hm5C_associated_SNPs_49680 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:76714091-76714126
64251 chr1 249211618 249211618 1 + C T rs141953668 249211618 + 249211598 249211638 41 TGTGTGAGTACTTTGGGCACCGGGGGTCCAAGCAGCTGCAC TGTGTGAGTACTTTGGGCACTGGGGGTCCAAGCAGCTGCAC Direct Loss 0.950467646384411 0 0.9132219 0.89335966 prediction 0.900935292768822 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211618 chr1:249211618 nonsynonymous SNV 0.875 3 21 hm5C_associated_SNPs_49685 0 0 4 RBM15 POSTAR2 ENCODE chr1:249211604-249211644
64251 chrX 37545270 37545270 1 + C G COAD 37545270 + 37545250 37545290 41 CCTGTTCGTGGCCGAGACAACGGCGGCGCTCAGCCTGAGCA CCTGTTCGTGGCCGAGACAAGGGCGGCGCTCAGCCTGAGCA Direct Loss 0.950461263918944 0 0.83861595 0.87898165 prediction 0.900922527837889 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37545270 chrX:37545270 nonsynonymous SNV 0.945 1 21 hm5C_associated_SNPs_49686 0 0 2 DDX3X POSTAR2 ENCODE chrX:37545195-37545312
64251 chr19 46029421 46029421 1 + C T UCEC 46029421 + 46029401 46029441 41 TCGTCCAGGAGCTGAGGAAGCGGGGTTCTCCCTGACCACAG TCGTCCAGGAGCTGAGGAAGTGGGGTTCTCCCTGACCACAG Direct Loss 0.95044533344468 0 0.9531014 0.93158937 prediction 0.90089066688936 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46029421 chr19:46029421 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_49688 0 0 1 PRPF8 POSTAR2 ENCODE chr19:46029402-46029436
64251 chr19 8436164 8436164 1 + C T rs1044250 8436164 + 8436144 8436184 41 GGAGAAGGTGCATAGCATCACGGGGGACCGCAACAGCCGCC GGAGAAGGTGCATAGCATCATGGGGGACCGCAACAGCCGCC Direct Loss 0.950443561101092 0 0.922273 0.8983598 prediction 0.900887122202183 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436164 chr19:8436164 nonsynonymous SNV 0.022 0 21 hm5C_associated_SNPs_49689 0 0 1 SND1 POSTAR2 ENCODE chr19:8436131-8436286
64251 chr19 50357680 50357680 1 + C T UCEC 50357680 + 50357660 50357700 41 CAGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGG CAGGAAGGTGCTCGGGTCTTTGGGGCACTGGGTCCCATCGG Direct Loss 0.950435514329158 0 0.96452713 0.94637626 prediction 0.900871028658317 Functional Loss - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50357680 chr19:50357680 synonymous SNV . 0 21 hm5C_associated_SNPs_49691 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:50357660-50357680
64251 chr9 100745613 100745613 1 + C T rs116897480 100745613 + 100745593 100745633 41 GTAGTGAGCCCAGCGCTGCGCTCCAGCCCCCTTTTCCCTCC GTAGTGAGCCCAGCGCTGCGTTCCAGCCCCCTTTTCCCTCC Direct Loss 0.950429397705803 0 0.6551487 0.16945636 prediction 0.900858795411606 Functional Loss - ANP32B ENSG00000136938 upstream Human protein_coding chr9:100745613 chr9:100745613 . . 0 21 hm5C_associated_SNPs_49692 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:100745607-100745636
64251 chr9 131580998 131580998 1 + C T rs2293969 131580998 + 131580978 131581018 41 GGCCGGCCTGACCCTGGCGTCGGGCGCGGGGCTGGGTGCGG GGCCGGCCTGACCCTGGCGTTGGGCGCGGGGCTGGGTGCGG Direct Loss 0.950407874061708 0 0.90398264 0.6579029 prediction 0.900815748123415 Functional Loss - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131580998 chr9:131580998 nonsynonymous SNV 0.872 0 21 hm5C_associated_SNPs_49694 0 0 2 GEMIN5 POSTAR2 ENCODE chr9:131580996-131581033
64251 chr2 231902428 231902428 1 + C A rs138198063 231902428 + 231902408 231902448 41 AACAGAGCCGCGCGCTGCTGCGGGACTTCGCACGGGCGGTG AACAGAGCCGCGCGCTGCTGAGGGACTTCGCACGGGCGGTG Direct Loss 0.950405384629341 0 0.8951502 0.8951242 prediction 0.900810769258681 Functional Loss - C2orf72 ENSG00000204128 CDS Human protein_coding chr2:231902428 chr2:231902428 synonymous SNV . 0 21 hm5C_associated_SNPs_49697 0 0 10 CSTF2T POSTAR2 ENCODE chr2:231902394-231902433
64251 chr16 14397837 14397837 1 + C T PRAD 14397837 + 14397817 14397857 41 GGAGGCTGTGGTCTCAGAATCGGGGTTTTGAGGGCGAGATG GGAGGCTGTGGTCTCAGAATTGGGGTTTTGAGGGCGAGATG Direct Loss 0.950400536342186 0 0.94905585 0.9209033 prediction 0.900801072684373 Functional Loss - MIR193B ENSG00000207639 ncRNA_exonic Human miRNA chr16:14397837 chr16:14397837 . . 0 21 hm5C_associated_SNPs_49700 0 0 6 TNRC6C POSTAR2 GSE21578,GSM545220 chr16:14397820-14397840
64251 chr19 35758631 35758631 1 + C G BLCA 35758631 + 35758611 35758651 41 GCGTCCCGAGAGCGCAGGCTCAAGAAGGTGAGGGCCGCCCT GCGTCCCGAGAGCGCAGGCTGAAGAAGGTGAGGGCCGCCCT Direct Loss 0.950353130204209 0 0.8440366 0.66436636 prediction 0.900706260408418 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35758631 chr19:35758631 synonymous SNV . 0 21 hm5C_associated_SNPs_49706 0 0 1 LARP4 POSTAR2 ENCODE chr19:35758493-35758633
64251 chr12 112580035 112580035 1 + C T rs146374447 112580035 + 112580015 112580055 41 AGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGC AGTGTGGCAGAGCAGGACTTTTGGAGGGCCGTATGTGAGGC Direct Loss 0.950347656684473 0 0.5724004 0.78228176 prediction 0.900695313368946 Functional Loss - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112580035 chr12:112580035 synonymous SNV . 0 21 hm5C_associated_SNPs_49708 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:112580014-112580045
64251 chr6 27833137 27833137 1 + C A rs201871635 27833137 + 27833117 27833157 41 TTATCGTTTCTTCGTCATGTCGGGACGCGGCAAGCAGGGAG TTATCGTTTCTTCGTCATGTAGGGACGCGGCAAGCAGGGAG Direct Loss 0.950302382881616 0 0.8609066 0.32437155 prediction 0.900604765763231 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833137 chr6:27833137 stopgain 0.025 0 21 hm5C_associated_SNPs_49713 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833100-27833140
64251 chr16 28884870 28884870 1 + C T CESC 28884870 + 28884850 28884890 41 GTCGAGGGCGCCAGAAGTGGCGGCAGCAGCAGCCGCAGCAG GTCGAGGGCGCCAGAAGTGGTGGCAGCAGCAGCCGCAGCAG Direct Loss 0.950289870873101 0 0.893003 0.6354268 prediction 0.900579741746201 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884870 chr16:28884870 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_49716 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:28884845-28884872
64251 chr10 88719858 88719858 1 + C T CESC 88719858 + 88719838 88719878 41 GTGGAGGAGGCGGAGAACATCGCGGTCACCTCCGGGGTGGT GTGGAGGAGGCGGAGAACATTGCGGTCACCTCCGGGGTGGT Direct Loss 0.950287662013875 0 0.89732814 0.8955669 prediction 0.90057532402775 Functional Loss - SNCG ENSG00000173267 CDS Human protein_coding chr10:88719858 chr10:88719858 nonsynonymous SNV 0.730 2 21 hm5C_associated_SNPs_49717 0 0 1 YBX3 POSTAR2 ENCODE chr10:88719807-88719881
64251 chr11 66610994 66610994 1 + C G LUSC 66610994 + 66610974 66611014 41 GCCGGAGCGGCCGCCCGAGTCGGCGGCGCTGGGCGGCCTGG GCCGGAGCGGCCGCCCGAGTGGGCGGCGCTGGGCGGCCTGG Direct Loss 0.950283185916795 0 0.9215016 0.9096152 prediction 0.900566371833589 Functional Loss - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66610994 chr11:66610994 nonsynonymous SNV 0.499 2 21 hm5C_associated_SNPs_49719 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:66610971-66611008
64251 chr17 54671875 54671875 1 + C A BLCA 54671875 + 54671855 54671895 41 GGCGGGGGTGCAGCTGGGGGCGCGGAGGACCTGGCGGAGCT GGCGGGGGTGCAGCTGGGGGAGCGGAGGACCTGGCGGAGCT Direct Loss 0.950256395243916 0 0.88071114 0.9000641 prediction 0.900512790487832 Functional Loss - NOG ENSG00000183691 CDS Human protein_coding chr17:54671875 chr17:54671875 synonymous SNV . 0 21 hm5C_associated_SNPs_49725 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:54671860-54671880
64251 chr2 206950423 206950423 1 + C G rs566703635 206950423 + 206950403 206950443 41 GTCGCCGCCCGCGGGCGCCCCGGAGGCCCTCAGGCCCCCGG GTCGCCGCCCGCGGGCGCCCGGGAGGCCCTCAGGCCCCCGG Direct Loss 0.950226439877089 0 0.9290092 0.9336362 prediction 0.900452879754177 Functional Loss - INO80D ENSG00000227946 ncRNA_exonic Human lincRNA chr2:206950423 chr2:206950423 . . 0 21 hm5C_associated_SNPs_49728 0 0 1 DDX3X POSTAR2 ENCODE chr2:206950407-206950427
64251 chr10 1046670 1046670 1 + C T BLCA 1046670 + 1046650 1046690 41 CTGGAGGATAGGAACACCATCGAGATGCAGGCCATCACTGC CTGGAGGATAGGAACACCATTGAGATGCAGGCCATCACTGC Direct Loss 0.950224706568835 0 0.7582443 0.43914863 prediction 0.90044941313767 Functional Loss - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1046670 chr10:1046670 synonymous SNV . 0 21 hm5C_associated_SNPs_49729 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:1046592-1046682
64251 chr6 114181089 114181089 1 + C G rs547521790 114181089 + 114181069 114181109 41 AAGGAGGCCCCCGCGGAAGGCGAGGCTGCCGAGCCCGGCTC AAGGAGGCCCCCGCGGAAGGGGAGGCTGCCGAGCCCGGCTC Direct Loss 0.950188679930452 0 0.9104751 0.90295327 prediction 0.900377359860903 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181089 chr6:114181089 synonymous SNV . 0 21 hm5C_associated_SNPs_49732 0 0 3 NOL12 POSTAR2 ENCODE chr6:114181079-114181124
64251 chr4 140375451 140375451 1 + C T BLCA 140375451 + 140375431 140375471 41 CCTGCCCGCTCCCGCATCTTCAAGATAATCGTGATCGGCGA CCTGCCCGCTCCCGCATCTTTAAGATAATCGTGATCGGCGA Direct Loss 0.950167268640356 0 0.145489 0.15682068 prediction 0.900334537280712 Functional Loss - RAB33B ENSG00000172007 CDS Human protein_coding chr4:140375451 chr4:140375451 synonymous SNV . 0 21 hm5C_associated_SNPs_49735 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:140375428-140375461
64251 chr8 146230423 146230423 1 + C T rs151236779 146230423 + 146230403 146230443 41 TTACGGAAGTATGAGGGAGTCGCGAGGCCGGAGATAAGCTT TTACGGAAGTATGAGGGAGTTGCGAGGCCGGAGATAAGCTT Direct Loss 0.950161116467535 0 0.90335727 0.8983941 prediction 0.90032223293507 Functional Loss - ZNF252P-AS1 ENSG00000255559 ncRNA_exonic Human antisense chr8:146230423 chr8:146230423 . . 0 21 hm5C_associated_SNPs_49738 0 0 1 AARS POSTAR2 ENCODE chr8:146230414-146230424
64251 chr11 63678382 63678382 1 + C T rs538278494 63678382 + 63678362 63678402 41 TCCCAAAGGGGGTAGGGGCCCGGGGCACCCAGGCAAGGTGG TCCCAAAGGGGGTAGGGGCCTGGGGCACCCAGGCAAGGTGG Direct Loss 0.950156724853257 0 0.9137553 0.89346814 prediction 0.900313449706515 Functional Loss - MARK2 ENSG00000072518 UTR3 Human protein_coding chr11:63678382 chr11:63678382 . . 0 21 hm5C_associated_SNPs_49739 0 0 1 DDX59 POSTAR2 ENCODE chr11:63678357-63678427
64251 chr9 34251714 34251714 1 + C T rs79550209 34251714 + 34251694 34251734 41 CTGGGGAGGTGGGGAAGATTCGGGCATGTGAGTGCCCCCAG CTGGGGAGGTGGGGAAGATTTGGGCATGTGAGTGCCCCCAG Direct Loss 0.950136122669088 0 0.9068338 0.88373864 prediction 0.900272245338176 Functional Loss - UBAP1 ENSG00000165006 UTR3 Human protein_coding chr9:34251714 chr9:34251714 . . 0 21 hm5C_associated_SNPs_49740 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:34251691-34251719
64251 chr11 118272366 118272366 1 + C T CESC 118272366 + 118272346 118272386 41 GCGGTTCGGGGCGACGGACTCTCCATTCCAGAACCATGGCC GCGGTTCGGGGCGACGGACTTTCCATTCCAGAACCATGGCC Direct Loss 0.950074039994337 0 0.9565594 0.52852595 prediction 0.900148079988675 Functional Loss - LOC100131626 ENSG00000254873 CDS Human antisense chr11:118272366 chr11:118272366 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49746 0 0 36 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:118272334-118272375
64251 chr5 172410873 172410873 1 + C G BRCA 172410873 + 172410853 172410893 41 AGGCGGCGACCATGGCGTATCACGGCCTCACTGTGCCTCTC AGGCGGCGACCATGGCGTATGACGGCCTCACTGTGCCTCTC Direct Loss 0.949993317151188 0 0.8222252 0.5470667 prediction 0.899986634302375 Functional Loss - ATP6V0E1 ENSG00000113732 CDS Human protein_coding chr5:172410873 chr5:172410873 nonsynonymous SNV 0.965 0 21 hm5C_associated_SNPs_49751 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:172410840-172410880
64251 chr1 9670738 9670738 1 + C A rs114072438 9670738 + 9670718 9670758 41 GCTGCTGTTCCCGTCACCCCCTGGAGAGGCCCCCACCACGC GCTGCTGTTCCCGTCACCCCATGGAGAGGCCCCCACCACGC Direct Loss 0.949983748687035 0 0.92673725 0.8793448 prediction 0.899967497374069 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9670738 chr1:9670738 nonsynonymous SNV 0.005 1 21 hm5C_associated_SNPs_49752 0 0 1 IGF2BP2 POSTAR2 ENCODE chr1:9670673-9670773
64251 chr10 127530826 127530826 1 + C A rs148228542 127530826 + 127530806 127530846 41 TCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTAC TCCAGGGAGACTAAGGTGGCAGGAACTCGCGGTCACAGTAC Direct Loss 0.949955817494924 0 0.6766867 0.7717565 prediction 0.899911634989849 Functional Loss - BCCIP ENSG00000107949 UTR3 Human protein_coding chr10:127530826 chr10:127530826 . . 0 21 hm5C_associated_SNPs_49755 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:127530758-127530827
64251 chrX 30237647 30237647 1 + C T LGG 30237647 + 30237627 30237667 41 TTTGAAAGATGAAGAGAAAGCCGGAGTCTGAGCCAGAGTTG TTTGAAAGATGAAGAGAAAGTCGGAGTCTGAGCCAGAGTTG Direct Loss 0.949910141451381 0 0.88212895 0.8900721 prediction 0.899820282902762 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237647 chrX:30237647 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_49758 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:30237618-30237662
64251 chr19 50905323 50905323 1 + C T COAD 50905323 + 50905303 50905343 41 GCCATCAGCCGGGACAGTCGCGGGGGGAGGGAGCTGACTGG GCCATCAGCCGGGACAGTCGTGGGGGGAGGGAGCTGACTGG Direct Loss 0.949808772014576 0 0.9447633 0.9298469 prediction 0.899617544029152 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905323 chr19:50905323 synonymous SNV . 0 21 hm5C_associated_SNPs_49768 1 0 8 BUD13 POSTAR2 ENCODE chr19:50905323-50905363
64251 chr22 38471196 38471196 1 + C T rs182411306 38471196 + 38471176 38471216 41 GGGAGGACGGAGCCTGGGAGCGGGGCGGGGCCGCCGCGCAA GGGAGGACGGAGCCTGGGAGTGGGGCGGGGCCGCCGCGCAA Direct Loss 0.949804503033737 0 0.91000134 0.8950461 prediction 0.899609006067473 Functional Loss - PICK1 ENSG00000100151 UTR3 Human protein_coding chr22:38471196 chr22:38471196 . . 0 21 hm5C_associated_SNPs_49770 0 0 3 CSTF2T POSTAR2 ENCODE chr22:38471168-38471269
64251 chr16 2577803 2577803 1 + C T STAD 2577803 + 2577783 2577823 41 TGGAGGGCCCCTTCATCAGCCGGGAGAAGCGGGGCGCGCAC TGGAGGGCCCCTTCATCAGCTGGGAGAAGCGGGGCGCGCAC Direct Loss 0.949802876535509 0 0.9261349 0.9031585 prediction 0.899605753071018 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577803 chr16:2577803 nonsynonymous SNV 0.973 3 21 hm5C_associated_SNPs_49772 0 0 7 AKAP8L POSTAR2 ENCODE chr16:2577725-2577821
64251 chr6 26045867 26045867 1 + C A SKCM 26045867 + 26045847 26045887 41 GCCTGGTGCGAGAAATCGCCCAGGACTTCAAAACCGACCTG GCCTGGTGCGAGAAATCGCCAAGGACTTCAAAACCGACCTG Direct Loss 0.949788624304766 0 0.84349275 0.8046683 prediction 0.899577248609532 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045867 chr6:26045867 nonsynonymous SNV 0.997 0 21 hm5C_associated_SNPs_49774 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr19 13869757 13869757 1 + C A rs10425445 13869757 + 13869737 13869777 41 GCCAACTGCGACTACGTGATCGTGAGTGGCGCCCAGCGCAA GCCAACTGCGACTACGTGATAGTGAGTGGCGCCCAGCGCAA Direct Loss 0.949768759293967 0 0.6141389 0.23251048 prediction 0.899537518587935 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869757 chr19:13869757 synonymous SNV . 0 21 hm5C_associated_SNPs_49777 0 0 7 BUD13 POSTAR2 ENCODE chr19:13869730-13870004
64251 chr2 96936907 96936907 1 + C T SKCM 96936907 + 96936887 96936927 41 ATGACGCGATCCGCGTGTTTCAGGAGGATCCCAACTCGGAT ATGACGCGATCCGCGTGTTTTAGGAGGATCCCAACTCGGAT Direct Loss 0.949741645480601 0 0.9472948 0.91739595 prediction 0.899483290961201 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96936907 chr2:96936907 stopgain 0.997 1 21 hm5C_associated_SNPs_49779 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:96936897-96936921
64251 chrX 47104862 47104862 1 + C T OV 47104862 + 47104842 47104882 41 TCTTCACCACTGTGGAGACCCTGGAGAAGGAAAACCCCTGG TCTTCACCACTGTGGAGACCTTGGAGAAGGAAAACCCCTGG Direct Loss 0.949661474666144 0 0.41956857 0.33078295 prediction 0.899322949332287 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47104862 chrX:47104862 synonymous SNV . 0 21 hm5C_associated_SNPs_49783 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chrX:47104831-47104866
64251 chr11 66272127 66272127 1 + C T UCEC 66272127 + 66272107 66272147 41 GCCGGAGGGCGGGCCCTGTACGAGGGGTATGCAACAGTCAC GCCGGAGGGCGGGCCCTGTATGAGGGGTATGCAACAGTCAC Direct Loss 0.949631477907269 0 0.91690004 0.8996405 prediction 0.899262955814538 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66272127 chr11:66272127 synonymous SNV . 0 21 hm5C_associated_SNPs_49787 0 0 2 RPS3 POSTAR2 ENCODE chr11:66272082-66272163
64251 chr6 4892507 4892507 1 + C T rs11962921 4892507 + 4892487 4892527 41 GCTTTATTGGGCCCCGGTGCCGAGAGGGCCAGGATGGGGAG GCTTTATTGGGCCCCGGTGCTGAGAGGGCCAGGATGGGGAG Direct Loss 0.949616718040277 0 0.875345 0.8955019 prediction 0.899233436080555 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892507 chr6:4892507 synonymous SNV . 0 21 hm5C_associated_SNPs_49789 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:4892472-4892525
64251 chr11 66243444 66243444 1 + C T LGG 66243444 + 66243424 66243464 41 GCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGC GCCAGGAGGCCGGCCTCTGCTTGGACCCTGGGCCGCCTAGC Direct Loss 0.949606881975052 0 0.5601009 0.41353014 prediction 0.899213763950105 Functional Loss - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66243444 chr11:66243444 synonymous SNV . 0 21 hm5C_associated_SNPs_49791 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66243442-66243488
64251 chr21 45503079 45503079 1 + C T BLCA 45503079 + 45503059 45503099 41 GGCAGGAGAGCAGCTCCTCTCTAGAGATGCCCTCAGGGGTG GGCAGGAGAGCAGCTCCTCTTTAGAGATGCCCTCAGGGGTG Direct Loss 0.949605093248995 0 0.26067108 0.21110544 prediction 0.89921018649799 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45503079 chr21:45503079 synonymous SNV . 0 21 hm5C_associated_SNPs_49792 0 0 1 ZNF622 POSTAR2 ENCODE chr21:45503038-45503100
64251 chr19 18779746 18779746 1 + C T COAD 18779746 + 18779726 18779766 41 GGCGGCCGCATCTATGCCCTCGGGGGCCGCATGGACCACGT GGCGGCCGCATCTATGCCCTTGGGGGCCGCATGGACCACGT Direct Loss 0.949589711155202 0 0.91882896 0.8694402 prediction 0.899179422310404 Functional Loss - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779746 chr19:18779746 synonymous SNV . 0 21 hm5C_associated_SNPs_49793 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18779735-18779780
64251 chr5 128430720 128430720 1 + C T BLCA 128430720 + 128430700 128430740 41 GTGGACTTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAA GTGGACTTGCCCAAGGGCTTTGCGGTGAGCGAGCGCTGCAA Direct Loss 0.949569753785194 0 0.57919854 0.5229227 prediction 0.899139507570388 Functional Loss - ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128430720 chr5:128430720 synonymous SNV . 0 21 hm5C_associated_SNPs_49796 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:128430706-128430738
64251 chr2 233324405 233324405 1 + C T rs148879701 233324405 + 233324385 233324425 41 ACCCAAGGAGGCTACTGGATCGGGGATTCCCAGGGGGGCTT ACCCAAGGAGGCTACTGGATTGGGGATTCCCAGGGGGGCTT Direct Loss 0.949539578652813 0 0.934419 0.91371727 prediction 0.899079157305627 Functional Loss - ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324405 chr2:233324405 . . 0 21 hm5C_associated_SNPs_49798 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:233324363-233324479
64251 chr17 8170154 8170154 1 + C G HNSC 8170154 + 8170134 8170174 41 CCCAGGTGCTGAAGCGTTACCGGGATGCTGGCCTCCATTGC CCCAGGTGCTGAAGCGTTACGGGGATGCTGGCCTCCATTGC Direct Loss 0.949488458768774 0 0.9065128 0.899154 prediction 0.898976917537548 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170154 chr17:8170154 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_49804 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr17:8170140-8170160
64251 chr11 70281208 70281208 1 + C T COAD 70281208 + 70281188 70281228 41 ATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGGTA ATTGACGACGGCTGGTGGCGTGGGGTGTGCAAGGGCCGGTA Direct Loss 0.949471916809061 0 0.9182441 0.8044447 prediction 0.898943833618122 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281208 chr11:70281208 synonymous SNV . 0 21 hm5C_associated_SNPs_49807 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70281150-70281227
64251 chr17 1637116 1637116 1 + C T COAD 1637116 + 1637096 1637136 41 GGTGGCGGGGGCCTGGGCAGCGGGAGCGACGACAACGCCCT GGTGGCGGGGGCCTGGGCAGTGGGAGCGACGACAACGCCCT Direct Loss 0.949461461772736 0 0.9382621 0.93599206 prediction 0.898922923545472 Functional Loss - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1637116 chr17:1637116 synonymous SNV . 0 21 hm5C_associated_SNPs_49809 0 0 1 DDX55 POSTAR2 ENCODE chr17:1637088-1637157
64251 chr15 45898653 45898653 1 + C T UCEC 45898653 + 45898633 45898673 41 AGTTGGAAAGGGAGCAGCAACGAGAGAAGGAGTTTGAAAGA AGTTGGAAAGGGAGCAGCAATGAGAGAAGGAGTTTGAAAGA Direct Loss 0.949444293800336 0 0.8464613 0.86293495 prediction 0.898888587600673 Functional Loss - BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45898653 chr15:45898653 stopgain 0.999 1 21 hm5C_associated_SNPs_49811 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:45898624-45898668
64251 chr16 72110869 72110869 1 + C T OV 72110869 + 72110849 72110889 41 CTGGAGGAGGACACCTGGTACGCGGCTGGGATCCTAAGCTT CTGGAGGAGGACACCTGGTATGCGGCTGGGATCCTAAGCTT Direct Loss 0.949434821866629 0 0.34846014 0.3274125 prediction 0.898869643733257 Functional Loss - HPR ENSG00000261701 CDS Human protein_coding chr16:72110869 chr16:72110869 nonsynonymous SNV 0.527 0 21 hm5C_associated_SNPs_49812 0 0 2 SND1 POSTAR2 ENCODE chr16:72110836-72110891
64251 chr20 43550282 43550282 1 + C T COAD 43550282 + 43550262 43550302 41 GTGAGCGGGCGGCTGCTGTACGCGGGCCGGGCCCAAAAGCG GTGAGCGGGCGGCTGCTGTATGCGGGCCGGGCCCAAAAGCG Direct Loss 0.949433095281497 0 0.44637048 0.40361 prediction 0.898866190562995 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43550282 chr20:43550282 synonymous SNV . 0 21 hm5C_associated_SNPs_49813 0 0 8 BUD13 POSTAR2 ENCODE chr20:43550261-43550301
64251 chr19 48258667 48258667 1 + C A rs565290384 48258667 + 48258647 48258687 41 CAGGAGCTGTTCCGGCTGCGCGGGATCAAGGCCCAGGTGGC CAGGAGCTGTTCCGGCTGCGAGGGATCAAGGCCCAGGTGGC Direct Loss 0.94942106846171 0 0.9111283 0.92683053 prediction 0.898842136923419 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258667 chr19:48258667 synonymous SNV . 0 21 hm5C_associated_SNPs_49814 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48258625-48258670
64251 chr19 4432183 4432183 1 + C T UCEC 4432183 + 4432163 4432203 41 AGACGCCCAAGGCCTCCAAGCGGGAGAGGAGAGACGAGCAG AGACGCCCAAGGCCTCCAAGTGGGAGAGGAGAGACGAGCAG Direct Loss 0.949402787167321 0 0.93414617 0.90389025 prediction 0.898805574334642 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4432183 chr19:4432183 nonsynonymous SNV 0.733 1 21 hm5C_associated_SNPs_49815 0 0 1 BUD13 POSTAR2 ENCODE chr19:4432133-4432185
64251 chr11 60701764 60701764 1 + C A rs546052784 60701764 + 60701744 60701784 41 GATCGAGGCACAGCGCCAGTCGGGAGTGGGCTGGGGCGGCT GATCGAGGCACAGCGCCAGTAGGGAGTGGGCTGGGGCGGCT Direct Loss 0.949400685918436 0 0.90551114 0.8867941 prediction 0.898801371836872 Functional Loss - TMEM132A ENSG00000006118 intronic Human protein_coding chr11:60701764 chr11:60701764 . . 0 21 hm5C_associated_SNPs_49817 0 0 2 RBFOX2 POSTAR2 ENCODE chr11:60701752-60701816
64251 chr1 229431652 229431652 1 + C T PRAD 229431652 + 229431632 229431672 41 GCTCTCCTCGTCTATGATATCACCAGGTAATGCCAGCTCCC GCTCTCCTCGTCTATGATATTACCAGGTAATGCCAGCTCCC Direct Loss 0.949377508362688 0 0.517538 0.47639072 prediction 0.898755016725375 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229431652 chr1:229431652 synonymous SNV 1.000 0 21 hm5C_associated_SNPs_49820 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr1:229431604-229431657
64251 chr7 141491041 141491041 1 + C T STAD 141491041 + 141491021 141491061 41 TGTGGAAGACAGTGTGTGCTCGGAGATGCTGGGGCCCATGA TGTGGAAGACAGTGTGTGCTTGGAGATGCTGGGGCCCATGA Direct Loss 0.94935611920078 0 0.90070695 0.6346479 prediction 0.89871223840156 Functional Loss - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141491041 chr7:141491041 nonsynonymous SNV 0.004 1 21 hm5C_associated_SNPs_49825 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:141491001-141491044
64251 chr21 42694901 42694901 1 + C T STAD 42694901 + 42694881 42694921 41 CTCCTTGTGTGCCTGGTATTCGGGGTACCTGCTCGCAGAGC CTCCTTGTGTGCCTGGTATTTGGGGTACCTGCTCGCAGAGC Direct Loss 0.949292546272437 0 0.9706776 0.9430872 prediction 0.898585092544875 Functional Loss - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42694901 chr21:42694901 nonsynonymous SNV 0.059 0 21 hm5C_associated_SNPs_49831 0 0 2 DDX3X POSTAR2 ENCODE chr21:42694856-42694903
64251 chr17 43227536 43227536 1 + C T STAD 43227536 + 43227516 43227556 41 CGCGTGTGCGGGAGCTGGAGCTGGAGCTGGACCGGCTGCGC CGCGTGTGCGGGAGCTGGAGTTGGAGCTGGACCGGCTGCGC Direct Loss 0.949285386502407 0 0.83463436 0.8229623 prediction 0.898570773004813 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43227536 chr17:43227536 synonymous SNV . 0 21 hm5C_associated_SNPs_49832 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:43227494-43227539
64251 chr2 220379714 220379714 1 + C T LGG 220379714 + 220379694 220379734 41 ACCAGGCGGCTGGCCTGGCCCGGGGCTACCTGACCCGGCCT ACCAGGCGGCTGGCCTGGCCTGGGGCTACCTGACCCGGCCT Direct Loss 0.949279268388838 0 0.9548901 0.92911804 prediction 0.898558536777675 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379714 chr2:220379714 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_49833 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379653-220379732
64251 chr11 67377938 67377938 1 + C T UCEC 67377938 + 67377918 67377958 41 TTTGACGTGTTTGTGGTGCGCGGGGCTGGGGCCTACATCTG TTTGACGTGTTTGTGGTGCGTGGGGCTGGGGCCTACATCTG Direct Loss 0.949267732823882 0 0.8716597 0.53226644 prediction 0.898535465647763 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67377938 chr11:67377938 synonymous SNV . 0 21 hm5C_associated_SNPs_49836 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr11:67377873-67377946
64251 chr15 41657766 41657766 1 + C G BLCA 41657766 + 41657746 41657786 41 ACTCAAGCGCTCTGCTATCTCTGCAGCTAAAACGGGTGTCA ACTCAAGCGCTCTGCTATCTGTGCAGCTAAAACGGGTGTCA Direct Loss 0.949226642206137 0 0.38034594 0.2522686 prediction 0.898453284412274 Functional Loss - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41657766 chr15:41657766 nonsynonymous SNV 0.003 4 21 hm5C_associated_SNPs_49843 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:41657720-41657784
64251 chr5 140474984 140474984 1 + C T SKCM 140474984 + 140474964 140475004 41 TGCTGAACAGAGCCCTGGATCGCGAGGAGCAGCCTGAGATC TGCTGAACAGAGCCCTGGATTGCGAGGAGCAGCCTGAGATC Direct Loss 0.949210467986503 0 0.8423709 0.32184628 prediction 0.898420935973006 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140474984 chr5:140474984 nonsynonymous SNV 0.994 3 21 hm5C_associated_SNPs_49844 0 0 1 SND1 POSTAR2 ENCODE chr5:140474968-140475016
64251 chr16 842299 842299 1 + C T UCEC 842299 + 842279 842319 41 GAGTCGGTGCTGGGTGCTGGCGGGAAGCCCAACTGCCTGGT GAGTCGGTGCTGGGTGCTGGTGGGAAGCCCAACTGCCTGGT Direct Loss 0.949187483626333 0 0.89699584 0.87508225 prediction 0.898374967252666 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842299 chr16:842299 synonymous SNV . 0 21 hm5C_associated_SNPs_49849 0 0 4 GRWD1 POSTAR2 ENCODE chr16:842274-842352
64251 chr16 56782275 56782275 1 + C T UCEC 56782275 + 56782255 56782295 41 CTTACAGGAGATCCAGCAGGCGGGAGAGCGCCTGCGTTCCC CTTACAGGAGATCCAGCAGGTGGGAGAGCGCCTGCGTTCCC Direct Loss 0.949182265933715 0 0.81363654 0.7741151 prediction 0.898364531867431 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56782275 chr16:56782275 nonsynonymous SNV 0.987 3 21 hm5C_associated_SNPs_49850 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:56782252-56782278
64251 chr16 67927192 67927192 1 + C T rs7196964 67927192 + 67927172 67927212 41 CCCGAGAATGGCGGCGGCGGCGGCGGCGGCGGCGGCCGCTG CCCGAGAATGGCGGCGGCGGTGGCGGCGGCGGCGGCCGCTG Direct Loss 0.949171409185425 0 0.9179416 0.9030545 prediction 0.89834281837085 Functional Loss - PSKH1 ENSG00000159792 UTR5 Human protein_coding chr16:67927192 chr16:67927192 . . 0 21 hm5C_associated_SNPs_49851 0 0 1 DDX3X POSTAR2 ENCODE chr16:67927180-67927275
64251 chr16 68373281 68373281 1 + C T STAD 68373281 + 68373261 68373301 41 TATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGAA TATGCACAGCTGGTGGAGTCTGGGAGGATGTGGTCGTGGAA Direct Loss 0.949159253222895 0 0.89039314 0.82281697 prediction 0.898318506445791 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68373281 chr16:68373281 synonymous SNV . 0 21 hm5C_associated_SNPs_49855 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:68373276-68373296
64251 chr16 89644100 89644100 1 + C A UCEC 89644100 + 89644080 89644120 41 GCTGTCAGGAGGACGATTTCCTGGGGGGCATGGAGTGCACC GCTGTCAGGAGGACGATTTCATGGGGGGCATGGAGTGCACC Direct Loss 0.949156463827484 0 0.91347563 0.9096544 prediction 0.898312927654968 Functional Loss - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89644100 chr16:89644100 nonsynonymous SNV 0.970 4 21 hm5C_associated_SNPs_49856 0 0 1 AGGF1 POSTAR2 ENCODE chr16:89644033-89644190
64251 chr1 229783361 229783361 1 + C T rs137900306 229783361 + 229783341 229783381 41 CGGCAGGGGGAGGAGGCCATCGGCAACCCCCACCACGTCAG CGGCAGGGGGAGGAGGCCATTGGCAACCCCCACCACGTCAG Direct Loss 0.949145332812898 0 0.88990843 0.85651195 prediction 0.898290665625795 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229783361 chr1:229783361 synonymous SNV . 0 21 hm5C_associated_SNPs_49857 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:229783360-229783380
64251 chr3 184086034 184086034 1 + C T ESCA 184086034 + 184086014 184086054 41 GCCAACAACCTGCATGGATTCGAGGTGGACTCCAGAGTTTA GCCAACAACCTGCATGGATTTGAGGTGGACTCCAGAGTTTA Direct Loss 0.94913636436964 0 0.9130746 0.89153814 prediction 0.89827272873928 Functional Loss - POLR2H ENSG00000163882 CDS Human protein_coding chr3:184086034 chr3:184086034 stopgain 0.997 0 21 hm5C_associated_SNPs_49859 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:184086011-184086225
64251 chr2 70485313 70485313 1 + C T COAD 70485313 + 70485293 70485333 41 GGCCATGGGGCGCGTCGTCGCGGAGCTCGTCTCCTCGCTGC GGCCATGGGGCGCGTCGTCGTGGAGCTCGTCTCCTCGCTGC Direct Loss 0.949128732293799 0 0.907296 0.8708317 prediction 0.898257464587597 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70485313 chr2:70485313 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_49860 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:70485300-70485320
64251 chr2 44079585 44079585 1 + C T LAML 44079585 + 44079565 44079605 41 GGGTTGTCGGGGGGTGAGCGCAGGAGAGTCAGCATTGGGGT GGGTTGTCGGGGGGTGAGCGTAGGAGAGTCAGCATTGGGGT Direct Loss 0.949127271837 0 0.91775876 0.91540635 prediction 0.898254543674 Functional Loss - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44079585 chr2:44079585 synonymous SNV . 0 21 hm5C_associated_SNPs_49862 0 0 1 RPS3 POSTAR2 ENCODE chr2:44079506-44079586
64251 chr6 147830303 147830303 1 + C T rs142462155 147830303 + 147830283 147830323 41 CTTCACGCTTGAGCCGCAGCCGGCGCCCCCCGGGCCGCCCG CTTCACGCTTGAGCCGCAGCTGGCGCCCCCCGGGCCGCCCG Direct Loss 0.949124531006332 0 0.7726909 0.320322 prediction 0.898249062012665 Functional Loss - SAMD5 ENSG00000203727 CDS Human protein_coding chr6:147830303 chr6:147830303 nonsynonymous SNV 0.164 0 21 hm5C_associated_SNPs_49863 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr6:147830286-147830345
64251 chr2 9572738 9572738 1 + C T STAD 9572738 + 9572718 9572758 41 TCATGAAGTTAAGGAAGTTGCGGGAATCAAGTTTTGGTGTT TCATGAAGTTAAGGAAGTTGTGGGAATCAAGTTTTGGTGTT Direct Loss 0.94909350776231 0 0.85526687 0.35200763 prediction 0.89818701552462 Functional Loss - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9572738 chr2:9572738 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_49865 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:9572725-9572745
64251 chr20 23334997 23334997 1 + C T STAD 23334997 + 23334977 23335017 41 AGTTTGAGGGGAACAAACAACGGGACTTCAACCAGAACTTC AGTTTGAGGGGAACAAACAATGGGACTTCAACCAGAACTTC Direct Loss 0.949065662026752 0 0.4169255 0.3577795 prediction 0.898131324053504 Functional Loss - NXT1 ENSG00000132661 CDS Human protein_coding chr20:23334997 chr20:23334997 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49870 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:23334983-23335011
64251 chr22 20760166 20760166 1 + C T UCEC 20760166 + 20760146 20760186 41 GCTTACAAGTGCGATGAATGCGGCAAGGCCTTCACCTGGAG GCTTACAAGTGCGATGAATGTGGCAAGGCCTTCACCTGGAG Direct Loss 0.948990006299314 0 0.6800429 0.45739886 prediction 0.897980012598628 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760166 chr22:20760166 synonymous SNV . 0 21 hm5C_associated_SNPs_49877 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:20760151-20760184
64251 chr11 6412941 6412941 1 + C T STAD 6412941 + 6412921 6412961 41 TGCACTGGGATCATGACTACCTGGAGGGCACGGACCCTGAC TGCACTGGGATCATGACTACTTGGAGGGCACGGACCCTGAC Direct Loss 0.948977265184838 0 0.4139989 0.42767105 prediction 0.897954530369677 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6412941 chr11:6412941 synonymous SNV . 0 21 hm5C_associated_SNPs_49879 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:6412922-6412952
64251 chr11 6629665 6629665 1 + C T rs1043388 6629665 + 6629645 6629685 41 ATCAATGCAGTGAATGAACACGGGAATGTGCCCCTGCACTA ATCAATGCAGTGAATGAACATGGGAATGTGCCCCTGCACTA Direct Loss 0.948971537724867 0 0.91267157 0.8767961 prediction 0.897943075449734 Functional Loss - ILK ENSG00000166333 CDS Human protein_coding chr11:6629665 chr11:6629665 synonymous SNV . 0 21 hm5C_associated_SNPs_49880 1 0 3 BUD13 POSTAR2 ENCODE chr11:6629597-6629689
64251 chr14 24108424 24108424 1 + C G rs146690475 24108424 + 24108404 24108444 41 GCCCGACGTCTGGCCCGGGACGGGGCCCACGTGGTCATCAG GCCCGACGTCTGGCCCGGGAGGGGGCCCACGTGGTCATCAG Direct Loss 0.948969344161553 0 0.47925717 0.68783283 prediction 0.897938688323107 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108424 chr14:24108424 nonsynonymous SNV 0.017 2 21 hm5C_associated_SNPs_49881 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr11 34144097 34144097 1 + C T LUSC 34144097 + 34144077 34144117 41 TGCTCGAGGACGGGGAAAATCTGCAGCCCTGGGATTGGCGA TGCTCGAGGACGGGGAAAATTTGCAGCCCTGGGATTGGCGA Direct Loss 0.948957745516485 0 0.48639497 0.59368736 prediction 0.897915491032971 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34144097 chr11:34144097 nonsynonymous SNV 0.971 4 21 hm5C_associated_SNPs_49884 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:34144069-34144100
64251 chr4 187113099 187113099 1 + C T rs574516881 187113099 + 187113079 187113119 41 GCAGAGGGTGGCGAGCTACGCGCGGAAATGGCAGCAGATGC GCAGAGGGTGGCGAGCTACGTGCGGAAATGGCAGCAGATGC Direct Loss 0.948948443483517 0 0.53178066 0.40981615 prediction 0.897896886967034 Functional Loss - CYP4V2 ENSG00000145476 CDS Human protein_coding chr4:187113099 chr4:187113099 nonsynonymous SNV 0.017 0 21 hm5C_associated_SNPs_49886 0 0 2 DDX3X POSTAR2 ENCODE chr4:187113080-187113144
64251 chr11 46726807 46726807 1 + C A SKCM 46726807 + 46726787 46726827 41 GGGCATTTGCGGCTCCACACCGGGGAGCGTCCTTACCGCTG GGGCATTTGCGGCTCCACACAGGGGAGCGTCCTTACCGCTG Direct Loss 0.948947994849329 0 0.9327817 0.92675656 prediction 0.897895989698659 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726807 chr11:46726807 synonymous SNV . 0 21 hm5C_associated_SNPs_49887 0 0 1 RBM15 POSTAR2 ENCODE chr11:46726776-46726815
64251 chr7 1026794 1026794 1 + C A LIHC 1026794 + 1026774 1026814 41 CCAACGCGGTGGCCTGCACCCTGGACATGGTCATGGCCGGG CCAACGCGGTGGCCTGCACCATGGACATGGTCATGGCCGGG Direct Loss 0.948938581911161 0 0.32931858 0.35781604 prediction 0.897877163822321 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1026794 chr7:1026794 nonsynonymous SNV 0.695 0 21 hm5C_associated_SNPs_49888 0 0 5 NOL12 POSTAR2 ENCODE chr7:1026783-1026816
64251 chr1 1334993 1334993 1 + C A rs185071634 1334993 + 1334973 1335013 41 GCCTGCCTGTGCGCCCCGAGCGGGGCTGGGACTCTTCCAAG GCCTGCCTGTGCGCCCCGAGAGGGGCTGGGACTCTTCCAAG Direct Loss 0.948937325177245 0 0.941604 0.90052444 prediction 0.897874650354489 Functional Loss - LOC148413 ENSG00000224870 CDS Human processed_transcript chr1:1334993 chr1:1334993 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49889 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:1334966-1335004
64251 chr15 66161839 66161839 1 + C T rs577327021 66161839 + 66161819 66161859 41 CCAGTCCGGCAGTTGAAGCTCGGCGCTCGGGTTACCCCTGC CCAGTCCGGCAGTTGAAGCTTGGCGCTCGGGTTACCCCTGC Direct Loss 0.948929859883806 0 0.9199808 0.66945386 prediction 0.897859719767611 Functional Loss - RAB11A ENSG00000103769 UTR5 Human protein_coding chr15:66161839 chr15:66161839 . . 0 21 hm5C_associated_SNPs_49890 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:66161820-66161840
64251 chr19 11486676 11486676 1 + C G BLCA 11486676 + 11486656 11486696 41 CTCAGGCAAGGGTTCAAGCTCTGGAGGCCAGCCCTGAGCTT CTCAGGCAAGGGTTCAAGCTGTGGAGGCCAGCCCTGAGCTT Direct Loss 0.948880745170182 0 0.8476579 0.781054 prediction 0.897761490340365 Functional Loss - SWSAP1 ENSG00000173928 CDS Human protein_coding chr19:11486676 chr19:11486676 nonsynonymous SNV 0.039 2 21 hm5C_associated_SNPs_49897 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:11486670-11486717
64251 chr11 65414246 65414246 1 + C G rs568637009 65414246 + 65414226 65414266 41 AGCTGCAGGCAGCGGGCTCACTGGTGTGGGGAGTGCGCGCG AGCTGCAGGCAGCGGGCTCAGTGGTGTGGGGAGTGCGCGCG Direct Loss 0.948876792505386 0 0.5376476 0.83067 prediction 0.897753585010772 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65414246 chr11:65414246 nonsynonymous SNV 0.491 2 21 hm5C_associated_SNPs_49901 0 0 1 PRPF8 POSTAR2 ENCODE chr11:65414202-65414290
64251 chr1 153615768 153615768 1 + C T UCEC 153615768 + 153615748 153615788 41 GCTTAAGAAGAGGTGGTGTTCGAGGTCGTGGAGGTCCTGGG GCTTAAGAAGAGGTGGTGTTTGAGGTCGTGGAGGTCCTGGG Direct Loss 0.948871802428179 0 0.9098536 0.8781753 prediction 0.897743604856359 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153615768 chr1:153615768 stopgain 1.000 1 21 hm5C_associated_SNPs_49902 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:153615716-153615774
64251 chr1 205210708 205210708 1 + C T COAD 205210708 + 205210688 205210728 41 TCCACAGCCGCCGTCGGTCTCGGGAAAGGGAGCACCAGACG TCCACAGCCGCCGTCGGTCTTGGGAAAGGGAGCACCAGACG Direct Loss 0.948857062116185 0 0.9389821 0.9065722 prediction 0.89771412423237 Functional Loss - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205210708 chr1:205210708 nonsynonymous SNV 0.983 2 21 hm5C_associated_SNPs_49903 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:205210700-205210720
64251 chr2 198570720 198570720 1 + C G HNSC 198570720 + 198570700 198570740 41 GATTCGTTTCCTGTATCTCTCGAGAGCGGGCATCCAGTCTC GATTCGTTTCCTGTATCTCTGGAGAGCGGGCATCCAGTCTC Direct Loss 0.948843652861787 0 0.92999077 0.6486347 prediction 0.897687305723575 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570720 chr2:198570720 synonymous SNV . 0 21 hm5C_associated_SNPs_49905 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:198570700-198570720
64251 chr12 93772186 93772186 1 + C T UCEC 93772186 + 93772166 93772206 41 GCCTGTGCTTCCGGAGCGAGCAGGAGGACGAGGTAGGGCGC GCCTGTGCTTCCGGAGCGAGTAGGAGGACGAGGTAGGGCGC Direct Loss 0.94883318017026 0 0.93655246 0.9154719 prediction 0.89766636034052 Functional Loss - NUDT4 ENSG00000173598 CDS Human protein_coding chr12:93772186 chr12:93772186 stopgain 0.972 1 21 hm5C_associated_SNPs_49906 0 0 2 PRPF8 POSTAR2 ENCODE chr12:93772174-93772244
64251 chr3 32927537 32927537 1 + C T UCEC 32927537 + 32927517 32927557 41 ATAAGAAAGCCCTGGAGGAACGCGAGTGTGAGCTGCTGTGG ATAAGAAAGCCCTGGAGGAATGCGAGTGTGAGCTGCTGTGG Direct Loss 0.948806019065522 0 0.39723027 0.4241349 prediction 0.897612038131044 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32927537 chr3:32927537 nonsynonymous SNV 0.914 5 21 hm5C_associated_SNPs_49909 0 0 5 BUD13 POSTAR2 ENCODE chr3:32927528-32927603
64251 chr16 74339301 74339301 1 + C T READ 74339301 + 74339281 74339321 41 AGGAGCTACCTGGAAAAAGTCGCCACAGGCAAGCTGCCCAT AGGAGCTACCTGGAAAAAGTTGCCACAGGCAAGCTGCCCAT Direct Loss 0.94880583158148 0 0.56090885 0.23348829 prediction 0.897611663162959 Functional Loss - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339301 chr16:74339301 synonymous SNV . 0 21 hm5C_associated_SNPs_49910 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:74339278-74339306
64251 chr2 241808766 241808766 1 + C T PAAD 241808766 + 241808746 241808786 41 GGGCAGCGAGCCGTGGACATCGGGGAGCGCATAGGTAAGGG GGGCAGCGAGCCGTGGACATTGGGGAGCGCATAGGTAAGGG Direct Loss 0.948805454307986 0 0.8948411 0.86968744 prediction 0.897610908615972 Functional Loss - AGXT ENSG00000172482 CDS Human protein_coding chr2:241808766 chr2:241808766 synonymous SNV . 0 21 hm5C_associated_SNPs_49911 0 0 2 RPS3 POSTAR2 ENCODE chr2:241808670-241808773
64251 chr11 209885 209885 1 + C T UCEC 209885 + 209865 209905 41 GCTGACGCTGGGGGTGACTCCTGAAGGGAACCCCCCACCCA GCTGACGCTGGGGGTGACTCTTGAAGGGAACCCCCCACCCA Direct Loss 0.948792445265224 0 0.23090851 0.45035416 prediction 0.897584890530449 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209885 chr11:209885 nonsynonymous SNV 0.018 0 21 hm5C_associated_SNPs_49912 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209860-209887
64251 chrX 118370497 118370497 1 + C T KIRP 118370497 + 118370477 118370517 41 CCGGCGGCCAGCGGCGACAGCGACGACGACGAGCCGCCCCC CCGGCGGCCAGCGGCGACAGTGACGACGACGAGCCGCCCCC Direct Loss 0.948789466568735 0 0.5483464 0.57191765 prediction 0.89757893313747 Functional Loss - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118370497 chrX:118370497 synonymous SNV . 0 21 hm5C_associated_SNPs_49914 0 0 6 DKC1 POSTAR2 ENCODE chrX:118370460-118370517
64251 chr22 18210164 18210164 1 + C G LUAD 18210164 + 18210144 18210184 41 GCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCCCGCCGGTG GCCGCCGTCTGAGGGCAAGTGTAGACTGTCCCCCGCCGGTG Direct Loss 0.948782135888038 0 0.58095306 0.75883657 prediction 0.897564271776076 Functional Loss - BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18210164 chr22:18210164 nonsynonymous SNV 0.013 1 21 hm5C_associated_SNPs_49916 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:18210147-18210186
64251 chr2 171573901 171573901 1 + C T STAD 171573901 + 171573881 171573921 41 CGGGGTTAAGCGGGAGGACGCGCGGGACCTGTGAGCCCTCC CGGGGTTAAGCGGGAGGACGTGCGGGACCTGTGAGCCCTCC Direct Loss 0.948771252274765 0 0.90757704 0.9042165 prediction 0.897542504549529 Functional Loss - SP5 ENSG00000204335 CDS Human protein_coding chr2:171573901 chr2:171573901 nonsynonymous SNV 0.752 0 21 hm5C_associated_SNPs_49918 0 0 2 CDC40 POSTAR2 ENCODE chr2:171573890-171573939
64251 chr19 35769888 35769888 1 + C T UCEC 35769888 + 35769868 35769908 41 CCAAGGCCTGCGATTACATCCGGGAGTTGCGCCAGACCAAC CCAAGGCCTGCGATTACATCTGGGAGTTGCGCCAGACCAAC Direct Loss 0.948767804390238 0 0.8992215 0.42365217 prediction 0.897535608780476 Functional Loss - USF2 ENSG00000105698 CDS Human protein_coding chr19:35769888 chr19:35769888 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_49919 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:35769852-35769910
64251 chr11 381866 381866 1 + C T rs563084177 381866 + 381846 381886 41 CTGGGCTTTGAGCTCGGTCCCGAGAGACCCGGCAGGGCTGG CTGGGCTTTGAGCTCGGTCCTGAGAGACCCGGCAGGGCTGG Direct Loss 0.94875558694529 0 0.9263159 0.90399694 prediction 0.897511173890581 Functional Loss - B4GALNT4 ENSG00000182272 UTR3 Human protein_coding chr11:381866 chr11:381866 . . 0 21 hm5C_associated_SNPs_49920 0 0 1 DDX3X POSTAR2 ENCODE chr11:381860-381877
64251 chr3 49449953 49449953 1 + C A LUSC 49449953 + 49449933 49449973 41 TCTTGCGGGAGTGGGAGGCGCAGGACATGCGCGTGACCCTC TCTTGCGGGAGTGGGAGGCGAAGGACATGCGCGTGACCCTC Direct Loss 0.948746467243891 0 0.88987124 0.86614156 prediction 0.897492934487782 Functional Loss - TCTA ENSG00000145022 CDS Human protein_coding chr3:49449953 chr3:49449953 nonsynonymous SNV 0.956 2 21 hm5C_associated_SNPs_49921 0 0 3 DDX3X POSTAR2 ENCODE chr3:49449856-49449960
64251 chr8 146279641 146279641 1 + C G rs148456256 146279641 + 146279621 146279661 41 ACTTCTGTTGTCAGAGAACCCTGGAGTTGGTCTGTCCCTGG ACTTCTGTTGTCAGAGAACCGTGGAGTTGGTCTGTCCCTGG Direct Loss 0.948738717204814 0 0.8379201 0.8849197 prediction 0.897477434409629 Functional Loss - C8orf33 ENSG00000182307 UTR3 Human protein_coding chr8:146279641 chr8:146279641 . . 0 21 hm5C_associated_SNPs_49922 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146279597-146279704
64251 chr20 25176399 25176399 1 + C T rs73339013 25176399 + 25176379 25176419 41 CGTATCCCGCGGGTGGAGGCCGGGGTGGCGCCGGCCGGGGC CGTATCCCGCGGGTGGAGGCTGGGGTGGCGCCGGCCGGGGC Direct Loss 0.948725045145147 0 0.92497647 0.913903 prediction 0.897450090290294 Functional Loss - LOC101926889 ENSG00000197586 CDS Human protein_coding chr20:25176399 chr20:25176399 unknown . 0 21 hm5C_associated_SNPs_49924 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:25176380-25176400
64251 chr19 50168871 50168871 1 - G A rs2304206 50168871 - 50168851 50168891 41 GTAGGTAACGCGGAAGAGCCCGGGAGAGCGTTGGTGGCGTC GTAGGTAACGCGGAAGAGCCTGGGAGAGCGTTGGTGGCGTC Direct Loss 0.948716202376554 0 0.8649748 0.7192814 prediction 0.897432404753108 Functional Loss - BCL2L12 ENSG00000126453;ENSG00000126456 UTR5 Human other chr19:50168871 chr19:50168871 . . 0 21 hm5C_associated_SNPs_49926 0 1 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:50168846-50168875
64251 chr9 38396046 38396046 1 + C T LGG 38396046 + 38396026 38396066 41 GCCGGATGGATGCCTCTGAGCGGGGCCGGCTGCTGAACCGC GCCGGATGGATGCCTCTGAGTGGGGCCGGCTGCTGAACCGC Direct Loss 0.948698563997494 0 0.91092753 0.8806542 prediction 0.897397127994987 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396046 chr9:38396046 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_49928 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:38396045-38396088
64251 chr1 156595103 156595103 1 + C G rs549528369 156595103 + 156595083 156595123 41 CTGCGGGGGGCTCCCGGATCCCGGAGTGCGCAGTTTCGGCT CTGCGGGGGGCTCCCGGATCGCGGAGTGCGCAGTTTCGGCT Direct Loss 0.948685063548069 0 0.92358536 0.93779075 prediction 0.897370127096139 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156595103 chr1:156595103 nonsynonymous SNV 0.926 4 21 hm5C_associated_SNPs_49931 0 0 1 DDX55 POSTAR2 ENCODE chr1:156595063-156595103
64251 chr17 76167020 76167020 1 + C T rs114913091 76167020 + 76167000 76167040 41 TGCCGCTATGGCAGTGCCATCGGGGTGCTGGCCTTCCTGGC TGCCGCTATGGCAGTGCCATTGGGGTGCTGGCCTTCCTGGC Direct Loss 0.948672065882596 0 0.9516876 0.9359421 prediction 0.897344131765192 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167020 chr17:76167020 synonymous SNV . 0 21 hm5C_associated_SNPs_49932 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76167004-76167056
64251 chr1 156703283 156703283 1 + C G LUAD 156703283 + 156703263 156703303 41 ACCAGGAGCTTCTGCAGGCTCTGGAGAAAGAGGAGAAGAGG ACCAGGAGCTTCTGCAGGCTGTGGAGAAAGAGGAGAAGAGG Direct Loss 0.948651320705179 0 0.71767116 0.6307344 prediction 0.897302641410357 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703283 chr1:156703283 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_49935 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:156703264-156703285
64251 chr7 48147076 48147076 1 + C T rs75887102 48147076 + 48147056 48147096 41 ATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCGG ATGGAGTCCTCGGTGTTTGCTGCCATGTGCAGCGCCTGCGG Direct Loss 0.948637683209812 0 0.81884444 0.26012093 prediction 0.897275366419624 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48147076 chr7:48147076 synonymous SNV . 0 21 hm5C_associated_SNPs_49938 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:48147050-48147084
64251 chr17 45297350 45297350 1 + C T GBM 45297350 + 45297330 45297370 41 ACGGCCAGTGCGGGGATGTACTGCGGGCCCTGGGCCAGAAC ACGGCCAGTGCGGGGATGTATTGCGGGCCCTGGGCCAGAAC Direct Loss 0.948588910281515 0 0.46845698 0.8837342 prediction 0.897177820563029 Functional Loss - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45297350 chr17:45297350 synonymous SNV . 0 21 hm5C_associated_SNPs_49942 0 0 1 SF3B4 POSTAR2 ENCODE chr17:45297345-45297380
64251 chr12 120427867 120427867 1 + C T UCEC 120427867 + 120427847 120427887 41 GAGCTGGCGCTGCTGGCGGCCGGGGAGCGGCCGTCCGACCC GAGCTGGCGCTGCTGGCGGCTGGGGAGCGGCCGTCCGACCC Direct Loss 0.948546707670566 0 0.9115044 0.905055 prediction 0.897093415341132 Functional Loss - BICDL1 ENSG00000135127 CDS Human protein_coding chr12:120427867 chr12:120427867 synonymous SNV . 0 21 hm5C_associated_SNPs_49945 0 0 1 DDX3X POSTAR2 ENCODE chr12:120427815-120427888
64251 chr2 10282395 10282395 1 + C T rs141974256 10282395 + 10282375 10282415 41 TTCTAAGGGGATGAGAAGCTCGGGAAGGTCTGACCAGCCTT TTCTAAGGGGATGAGAAGCTTGGGAAGGTCTGACCAGCCTT Direct Loss 0.948543131603036 0 0.8823944 0.82530665 prediction 0.897086263206073 Functional Loss - C2orf48 ENSG00000163009 CDS Human lincRNA chr2:10282395 chr2:10282395 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49946 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:10282372-10282414
64251 chr19 58721386 58721386 1 + C T UCEC 58721386 + 58721366 58721406 41 GCCTCGAGGTCACTGCCCAGCAGGAGGAGAAGCAGGAGGAT GCCTCGAGGTCACTGCCCAGTAGGAGGAGAAGCAGGAGGAT Direct Loss 0.948511920371098 0 0.80942845 0.5551674 prediction 0.897023840742195 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58721386 chr19:58721386 stopgain 0.002 0 21 hm5C_associated_SNPs_49950 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:58721386-58721387
64251 chr19 3533330 3533330 1 + C A KIRC 3533330 + 3533310 3533350 41 TCACAGAACCAGATCCTTGTCTGGAAGTACCCCTCCCTGAC TCACAGAACCAGATCCTTGTATGGAAGTACCCCTCCCTGAC Direct Loss 0.948506243240606 0 0.5501963 0.58295596 prediction 0.897012486481213 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3533330 chr19:3533330 synonymous SNV . 0 21 hm5C_associated_SNPs_49951 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:3533329-3533330
64251 chr9 92220750 92220750 1 + C T GBM 92220750 + 92220730 92220770 41 GCGGCTATCGTGGGCGCCGGCGAGGAGGCGGGTGCGCCGGG GCGGCTATCGTGGGCGCCGGTGAGGAGGCGGGTGCGCCGGG Direct Loss 0.948487366385282 0 0.92865896 0.88324916 prediction 0.896974732770564 Functional Loss - GADD45G ENSG00000130222 CDS Human protein_coding chr9:92220750 chr9:92220750 synonymous SNV . 0 21 hm5C_associated_SNPs_49954 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr9:92220734-92220751
64251 chr13 114287483 114287483 1 + C A COAD 114287483 + 114287463 114287503 41 GGCAAGGGCCTACGGCATTTCTCCATGAAGGTCTGCGAGAA GGCAAGGGCCTACGGCATTTATCCATGAAGGTCTGCGAGAA Direct Loss 0.9484832553266 0 0.9667064 0.87746775 prediction 0.896966510653201 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114287483 chr13:114287483 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_49956 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:114287431-114287483
64251 chr7 150020563 150020563 1 - G C rs566237395 150020563 - 150020543 150020583 41 CCGCAGAGCCGGCGCCTCCTCGGCAGGTAAGAGCCGCAGCC CCGCAGAGCCGGCGCCTCCTGGGCAGGTAAGAGCCGCAGCC Direct Loss 0.948482071301251 0 0.7108328 0.5994656 prediction 0.896964142602501 Functional Loss - ACTR3C;LRRC61 ENSG00000106526 CDS Human protein_coding chr7:150020563 chr7:150020563 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_49957 0 0 1 DDX3X POSTAR2 ENCODE chr7:150020557-150020637
64251 chr19 47712512 47712512 1 + C G HNSC 47712512 + 47712492 47712532 41 GCCTTGGCCCCAAGTGAACTCAAGATTTGGCAGCCCCAGAG GCCTTGGCCCCAAGTGAACTGAAGATTTGGCAGCCCCAGAG Direct Loss 0.948451505538538 0 0.8363874 0.4271873 prediction 0.896903011077075 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47712512 chr19:47712512 stopgain 0.000 0 21 hm5C_associated_SNPs_49960 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47712443-47712514
64251 chr1 173802613 173802613 1 + C T UCEC 173802613 + 173802593 173802633 41 CCCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTG CCCAGATGGTCATGAAAATGTGGGAATATCTCTGTAATCTG Direct Loss 0.94841392762039 0 0.32432643 0.191852 prediction 0.89682785524078 Functional Loss - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173802613 chr1:173802613 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_49967 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:173802606-173802626
64251 chrX 151908813 151908813 1 + C T COAD 151908813 + 151908793 151908833 41 TCACTGTCCTGGGGGAAGCTCGGGGAGACCAGGTGGACTGG TCACTGTCCTGGGGGAAGCTTGGGGAGACCAGGTGGACTGG Direct Loss 0.948371523412852 0 0.9462999 0.9284361 prediction 0.896743046825704 Functional Loss - CSAG1 ENSG00000198930 CDS Human protein_coding chrX:151908813 chrX:151908813 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49971 0 0 3 RPS3 POSTAR2 ENCODE chrX:151908789-151908830
64251 chr14 94568857 94568857 1 + C T SKCM 94568857 + 94568837 94568877 41 TCTGTGACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGC TCTGTGACATCTAAAGTTATTGGGGGCTTTGCTGGGACAGC Direct Loss 0.948287625986684 0 0.9544388 0.926687 prediction 0.896575251973368 Functional Loss - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568857 chr14:94568857 synonymous SNV . 0 21 hm5C_associated_SNPs_49984 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:94568842-94568913
64251 chr17 60691274 60691274 1 + C T rs550140664 60691274 + 60691254 60691294 41 AGGTGGGTGGATCACGAGGTCGGGAGTTCGAGATCAGTCTG AGGTGGGTGGATCACGAGGTTGGGAGTTCGAGATCAGTCTG Direct Loss 0.948286424180989 0 0.91999733 0.8502872 prediction 0.896572848361977 Functional Loss - TLK2 ENSG00000146872 downstream Human protein_coding chr17:60691274 chr17:60691274 . . 0 21 hm5C_associated_SNPs_49985 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221662 chr17:60691260-60691280
64251 chr17 33325679 33325679 1 + C T UCEC 33325679 + 33325659 33325699 41 GTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCCGACAC GTGAAGAAAGACTATTTGAATGAGGGGGCCATGGCCGACAC Direct Loss 0.948258808852711 0 0.91109693 0.8926859 prediction 0.896517617705422 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33325679 chr17:33325679 synonymous SNV . 0 21 hm5C_associated_SNPs_49990 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33325658-33325683
64251 chr11 67379872 67379872 1 + C T COAD 67379872 + 67379852 67379892 41 CGCCACTTTCGGCCGGAGCTCGAGGAGCGGATGCAGCGGTT CGCCACTTTCGGCCGGAGCTTGAGGAGCGGATGCAGCGGTT Direct Loss 0.948226023330171 0 0.94038963 0.919628 prediction 0.896452046660343 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67379872 chr11:67379872 synonymous SNV . 0 21 hm5C_associated_SNPs_49992 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67379839-67379899
64251 chr17 16342539 16342539 1 + C T rs540226461 16342539 + 16342519 16342559 41 TCCTGCGCCCGCGTGGCTTTCGCGGCGGGCGCTGCGGCCCG TCCTGCGCCCGCGTGGCTTTTGCGGCGGGCGCTGCGGCCCG Direct Loss 0.948214410768096 0 0.9365469 0.9150835 prediction 0.896428821536193 Functional Loss - LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342539 chr17:16342539 . . 0 21 hm5C_associated_SNPs_49993 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:16342520-16342540
64251 chr3 142838693 142838693 1 + C T rs184039954 142838693 + 142838673 142838713 41 CCTCCTGGGCGCCGCTTTCGCGCGGCGGCGGCGGCTGCGGC CCTCCTGGGCGCCGCTTTCGTGCGGCGGCGGCGGCTGCGGC Direct Loss 0.948208499632953 0 0.913503 0.8988302 prediction 0.896416999265905 Functional Loss - CHST2 ENSG00000175040 UTR5 Human protein_coding chr3:142838693 chr3:142838693 . . 0 21 hm5C_associated_SNPs_49994 0 0 5 DDX3X POSTAR2 ENCODE chr3:142838671-142838717
64251 chr9 37430673 37430673 1 + C T SARC 37430673 + 37430653 37430693 41 GGCCACCTTACCCAGCAAGCCTGGAGAGGAGCCATCCCCAC GGCCACCTTACCCAGCAAGCTTGGAGAGGAGCCATCCCCAC Direct Loss 0.948201087871118 0 0.37720126 0.25860417 prediction 0.896402175742236 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37430673 chr9:37430673 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_49997 0 0 3 BUD13 POSTAR2 ENCODE chr9:37430611-37430695
64251 chr14 24108198 24108198 1 + C T STAD 24108198 + 24108178 24108218 41 TAACCGGGTAGCCGTGGTCACGGGGTCCACCAGTGGGTGAG TAACCGGGTAGCCGTGGTCATGGGGTCCACCAGTGGGTGAG Direct Loss 0.948185596716626 0 0.92528903 0.8749869 prediction 0.896371193433252 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108198 chr14:24108198 nonsynonymous SNV 0.026 4 21 hm5C_associated_SNPs_50004 0 0 7 EFTUD2 POSTAR2 ENCODE chr14:24108196-24108267
64251 chr2 169417792 169417792 1 + C T SKCM 169417792 + 169417772 169417812 41 GGTTTCGACAAAGACGCAATCAGGAGAAGCCAAGCACGCTG GGTTTCGACAAAGACGCAATTAGGAGAAGCCAAGCACGCTG Direct Loss 0.948171856879196 0 0.9100449 0.8799691 prediction 0.896343713758392 Functional Loss - CERS6 ENSG00000172292 CDS Human protein_coding chr2:169417792 chr2:169417792 stopgain 0.999 1 21 hm5C_associated_SNPs_50005 0 0 5 GRWD1 POSTAR2 ENCODE chr2:169417702-169417836
64251 chr7 36193946 36193946 1 + C G KIRC 36193946 + 36193926 36193966 41 GGCGGACCATGGGGAGCACCCTGGGCTGCCACCGCTCCATC GGCGGACCATGGGGAGCACCGTGGGCTGCCACCGCTCCATC Direct Loss 0.948170688857192 0 0.93972623 0.92659307 prediction 0.896341377714384 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36193946 chr7:36193946 nonsynonymous SNV 0.995 3 21 hm5C_associated_SNPs_50006 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:36193920-36193948
64251 chr14 55004881 55004881 1 + C G STAD 55004881 + 55004861 55004901 41 GTTGGAAAAGGTGGGACTCTCTGAAAGTGAAGTTGAGCCAT GTTGGAAAAGGTGGGACTCTGTGAAAGTGAAGTTGAGCCAT Direct Loss 0.948150466213082 0 0.4663041 0.23681253 prediction 0.896300932426164 Functional Loss - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:55004881 chr14:55004881 nonsynonymous SNV 0.035 0 21 hm5C_associated_SNPs_50007 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:55004863-55004900
64251 chr17 79612315 79612315 1 + C A BLCA 79612315 + 79612295 79612335 41 AGGGGTCTCTGGGAAGTGATCTGGGGGGGCCCCTGCCCGCA AGGGGTCTCTGGGAAGTGATATGGGGGGGCCCCTGCCCGCA Direct Loss 0.948119451341893 0 0.92678875 0.90205973 prediction 0.896238902683785 Functional Loss - TSPAN10 ENSG00000182612 CDS Human protein_coding chr17:79612315 chr17:79612315 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_50011 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:79612292-79612323
64251 chr7 150094608 150094608 1 + C T CESC 150094608 + 150094588 150094628 41 CGCACTGTGGCCGCGGCTTCCGCCAGAAGCAGCACCTGCTC CGCACTGTGGCCGCGGCTTCTGCCAGAAGCAGCACCTGCTC Direct Loss 0.94811281472641 0 0.7567814 0.36494437 prediction 0.896225629452821 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150094608 chr7:150094608 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_50013 0 0 1 FXR2 POSTAR2 ENCODE chr7:150094532-150094621
64251 chr22 20194318 20194318 1 + C A UCEC 20194318 + 20194298 20194338 41 GGTGGGGTGCAGGGGCCTCCCTGGCTGCAGGGCCCACCCAC GGTGGGGTGCAGGGGCCTCCATGGCTGCAGGGCCCACCCAC Direct Loss 0.948055636536966 0 0.1944845 0.15247479 prediction 0.896111273073932 Functional Loss - LINC00896 ENSG00000236499 ncRNA_exonic Human lincRNA chr22:20194318 chr22:20194318 . . 0 21 hm5C_associated_SNPs_50018 0 0 2 EWSR1 POSTAR2 ENCODE chr22:20194304-20194367
64251 chr16 89985930 89985930 1 + C T STAD 89985930 + 89985910 89985950 41 TTGTCGGACCTGCTGGTGAGCGGGAGCAACGTGCTGGAGAC TTGTCGGACCTGCTGGTGAGTGGGAGCAACGTGCTGGAGAC Direct Loss 0.947986759111259 0 0.9276347 0.8648657 prediction 0.895973518222518 Functional Loss - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89985930 chr16:89985930 synonymous SNV . 0 21 hm5C_associated_SNPs_50027 0 0 2 EIF3H POSTAR2 ENCODE chr16:89985902-89985960
64251 chr11 65631361 65631361 1 + C G rs34891773 65631361 + 65631341 65631381 41 GCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTTG GCATCATCGACGGCCGCTTCGGGGAGCAGAAGGTAATTTTG Direct Loss 0.947984028125915 0 0.94483596 0.92370063 prediction 0.89596805625183 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631361 chr11:65631361 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_50029 0 0 6 GEMIN5 POSTAR2 ENCODE chr11:65631344-65631428
64251 chr22 50615939 50615939 1 + C T GBM 50615939 + 50615919 50615959 41 GCGCTGGGCGCGTCCCCGGACGGGGCGGCAGGTGCGGGGCC GCGCTGGGCGCGTCCCCGGATGGGGCGGCAGGTGCGGGGCC Direct Loss 0.947980403965689 0 0.9230984 0.906978 prediction 0.895960807931377 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615939 chr22:50615939 synonymous SNV . 0 21 hm5C_associated_SNPs_50030 0 0 2 RBM15 POSTAR2 ENCODE chr22:50615896-50615955
64251 chr1 156105746 156105746 1 + C T UCEC 156105746 + 156105726 156105766 41 AGGACTCACTGGCCCGTGAGCGGGACACCAGCCGGCGGCTG AGGACTCACTGGCCCGTGAGTGGGACACCAGCCGGCGGCTG Direct Loss 0.947979343228658 0 0.91106457 0.86360204 prediction 0.895958686457317 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156105746 chr1:156105746 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_50031 1 0 8 FMR1 POSTAR2 ENCODE chr1:156105704-156105778
64251 chrX 23801995 23801995 1 + C T SKCM 23801995 + 23801975 23802015 41 GCCGAAAGAGCACTGGACTCCGGAAGGTAACCCCTCGCCCT GCCGAAAGAGCACTGGACTCTGGAAGGTAACCCCTCGCCCT Direct Loss 0.947939885680815 0 0.92296636 0.8813202 prediction 0.895879771361631 Functional Loss - SAT1 ENSG00000130066 CDS Human protein_coding chrX:23801995 chrX:23801995 nonsynonymous SNV 0.860 0 21 hm5C_associated_SNPs_50035 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:23801914-23802002
64251 chr2 242098736 242098736 1 + C A UCEC 242098736 + 242098716 242098756 41 AGATCAAGAAGATTGAGAATCTGGAGGCGCTAACAGAGCTG AGATCAAGAAGATTGAGAATATGGAGGCGCTAACAGAGCTG Direct Loss 0.94793781338898 0 0.3294543 0.23910522 prediction 0.895875626777961 Functional Loss - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242098736 chr2:242098736 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_50037 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:242098653-242098750
64251 chr6 28264692 28264692 1 + C G rs3800325 28264692 + 28264672 28264712 41 ACCTCTGTGGGAACTCAGCTCAGGAGACAGTTATGAGCCTC ACCTCTGTGGGAACTCAGCTGAGGAGACAGTTATGAGCCTC Direct Loss 0.947923760852782 0 0.8946778 0.8524554 prediction 0.895847521705563 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28264692 chr6:28264692 nonsynonymous SNV 0.086 1 21 hm5C_associated_SNPs_50042 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:28264631-28264699
64251 chr10 104629869 104629869 1 + C T UCEC 104629869 + 104629849 104629889 41 CGGGCAGGTGCTGAAGAGATCGGCAGACCTCCAGACCAACG CGGGCAGGTGCTGAAGAGATTGGCAGACCTCCAGACCAACG Direct Loss 0.947923545692075 0 0.91656756 0.9092481 prediction 0.895847091384149 Functional Loss - AS3MT ENSG00000214435 CDS Human protein_coding chr10:104629869 chr10:104629869 nonsynonymous SNV 0.331 2 21 hm5C_associated_SNPs_50043 0 0 1 BUD13 POSTAR2 ENCODE chr10:104629785-104629926
64251 chr5 134190985 134190985 1 + C T UCEC 134190985 + 134190965 134191005 41 TTTGGGGACAACTAAAGCTGCGGGATACAAAGTCAGCCCAG TTTGGGGACAACTAAAGCTGTGGGATACAAAGTCAGCCCAG Direct Loss 0.947918072102786 0 0.93148214 0.8780732 prediction 0.895836144205573 Functional Loss - C5orf24 ENSG00000181904 CDS Human protein_coding chr5:134190985 chr5:134190985 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_50044 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:134190959-134191006
64251 chr3 122869160 122869160 1 + C T CESC 122869160 + 122869140 122869180 41 ACCTGGTGGGGGACAACTTCCGGGAGACCCTGAAGAAGAAG ACCTGGTGGGGGACAACTTCTGGGAGACCCTGAAGAAGAAG Direct Loss 0.947873104708535 0 0.9038441 0.87764525 prediction 0.89574620941707 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122869160 chr3:122869160 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_50053 0 0 7 DDX24 POSTAR2 ENCODE chr3:122869140-122869212
64251 chrX 118602549 118602549 1 + C T UCEC 118602549 + 118602529 118602569 41 GGCCGCAGCCATCTCCAAGACGGCGGTAGCGCCCATCGAGC GGCCGCAGCCATCTCCAAGATGGCGGTAGCGCCCATCGAGC Direct Loss 0.947861488287653 0 0.89864147 0.7955669 prediction 0.895722976575305 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118602549 chrX:118602549 nonsynonymous SNV 0.977 3 21 hm5C_associated_SNPs_50055 0 0 19 FUS POSTAR2 DRA001158,DRS012384 chrX:118602506-118602550
64251 chr17 78092070 78092070 1 + C T rs121907943 78092070 + 78092050 78092090 41 TGACCAAGGGTGGGGAGGCCCGAGGGGAGCTGTTCTGGGAC TGACCAAGGGTGGGGAGGCCTGAGGGGAGCTGTTCTGGGAC Direct Loss 0.947840165415031 0 0.9102343 0.9053564 prediction 0.895680330830062 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78092070 chr17:78092070 stopgain 0.021 0 21 hm5C_associated_SNPs_50057 2 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78092070-78092089
64251 chr8 145150812 145150812 1 + C T UCEC 145150812 + 145150792 145150832 41 AGCGCTGGGCATGCTGGCGGCAGGGGGTGCGGGGCTGGCCA AGCGCTGGGCATGCTGGCGGTAGGGGGTGCGGGGCTGGCCA Direct Loss 0.94777596547992 0 0.9081303 0.8895519 prediction 0.89555193095984 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145150812 chr8:145150812 nonsynonymous SNV 0.983 1 21 hm5C_associated_SNPs_50072 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145150800-145150824
64251 chr16 29675896 29675896 1 + C T UCEC 29675896 + 29675876 29675916 41 TGTGGCGCCGGCGGCAGAAGCGGCGGACTGGGGCCCTCGTG TGTGGCGCCGGCGGCAGAAGTGGCGGACTGGGGCCCTCGTG Direct Loss 0.947717022084794 0 0.9113653 0.8996271 prediction 0.895434044169588 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675896 chr16:29675896 nonsynonymous SNV 0.533 3 21 hm5C_associated_SNPs_50082 0 0 5 RPS3 POSTAR2 ENCODE chr16:29675852-29675920
64251 chr5 133707165 133707165 1 + C A rs34835090 133707165 + 133707145 133707185 41 GCAGGGTTGTTTGTCAGTCTCGGCGGCGGCGGCGGCGGCGG GCAGGGTTGTTTGTCAGTCTAGGCGGCGGCGGCGGCGGCGG Direct Loss 0.947716607273223 0 0.9285096 0.88841075 prediction 0.895433214546446 Functional Loss - UBE2B ENSG00000119048 UTR5 Human protein_coding chr5:133707165 chr5:133707165 . . 0 21 hm5C_associated_SNPs_50083 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr5:133707153-133707176
64251 chr1 229431628 229431628 1 + C T UCEC 229431628 + 229431608 229431648 41 AGTTATTACCGAGGCGCGGCCGGGGCTCTCCTCGTCTATGA AGTTATTACCGAGGCGCGGCTGGGGCTCTCCTCGTCTATGA Direct Loss 0.947686076417229 0 0.8961743 0.8576143 prediction 0.895372152834458 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229431628 chr1:229431628 synonymous SNV . 0 21 hm5C_associated_SNPs_50085 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr1:229431604-229431657
64251 chr3 101395620 101395620 1 - G C CHOL 101395620 - 101395600 101395640 41 ACGTGGTGCGCGGCGGGACTCTGTATTACCAGCGGCGGCAG ACGTGGTGCGCGGCGGGACTGTGTATTACCAGCGGCGGCAG Direct Loss 0.947640841423754 0 0.11755082 0.03467989 prediction 0.895281682847509 Functional Loss - ZBTB11 ENSG00000066422 CDS Human protein_coding chr3:101395620 chr3:101395620 nonsynonymous SNV 0.989 3 21 hm5C_associated_SNPs_50090 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:101395614-101395633
64251 chr2 219294189 219294189 1 + A C rs141545095 219294185 + 219294165 219294205 41 ACACGGTGGTGGAGCCGGCACTCAAGGCTGCACTCAAACTG ACACGGTGGTGGAGCCGGCACTCACGGCTGCACTCAAACTG < 41bp 0.868624387701023 0.500163775426623 0.22476 0.11894676 prediction 0.736921224548799 Functional Loss - VIL1 ENSG00000127831;ENSG00000127831 exonic;splicing Human other chr2:219294185 chr2:219294189 nonsynonymous SNV 0.896 1 25 hm5C_associated_SNPs_50092 0 0 1 PPIG POSTAR2 ENCODE chr2:219294148-219294194
64251 chr11 82877507 82877507 1 + A C rs143961720 82877503 + 82877483 82877523 41 CACCTAAAGCTGGAAAGATTCGCCAATCTGGAGCTAAGCAG CACCTAAAGCTGGAAAGATTCGCCCATCTGGAGCTAAGCAG < 41bp 0.861465405418242 0.495701139320473 0.5290242 0.08890998 prediction 0.722930810836484 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82877503 chr11:82877507 nonsynonymous SNV 0.955 0 25 hm5C_associated_SNPs_50095 0 0 2 UCHL5 POSTAR2 ENCODE chr11:82877496-82877563
64251 chr19 50435872 50435872 1 + A C LUAD 50435868 + 50435848 50435888 41 CCTAGATGCCCCGCCCCTCCCACCACCCTCCCCGCCGCCAC CCTAGATGCCCCGCCCCTCCCACCCCCCTCCCCGCCGCCAC < 41bp 0.871680042822925 0.51405758631643 0.10314578 0.060653567 prediction 0.715244913012991 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50435868 chr19:50435872 synonymous SNV . 0 25 hm5C_associated_SNPs_50099 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:50435851-50435872
64251 chr11 64973961 64973961 1 + A C GBM 64973957 + 64973937 64973977 41 GTGGGCCAGCCGGCCGTACACTTGAAGCGTGACTTCTTCCT GTGGGCCAGCCGGCCGTACACTTGCAGCGTGACTTCTTCCT < 41bp 0.855842816503908 0.496099917836796 0.18140855 0.05020657 prediction 0.711685633007816 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64973957 chr11:64973961 nonsynonymous SNV 0.785 2 25 hm5C_associated_SNPs_50103 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr11:64973960-64973985
64251 chr19 47491306 47491306 1 + A C SKCM 47491302 + 47491282 47491322 41 ACAAGTCTGAGATGGAGAGTCTGCAGAGACAGTTTGATCAA ACAAGTCTGAGATGGAGAGTCTGCCGAGACAGTTTGATCAA < 41bp 0.85583983607926 0.479258186367007 0.56733614 0.35377848 prediction 0.711679672158519 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47491302 chr19:47491306 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_50104 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47491284-47491314
64251 chr17 48753029 48753029 1 + G T LUAD 48753026 + 48753006 48753046 41 TGTCCTCAGATGGGGAGGGACAGGGTCGGCCTGTACCCCGG TGTCCTCAGATGGGGAGGGACAGTGTCGGCCTGTACCCCGG < 41bp 0.855388937336333 0.497730917965042 0.9278975 0.20596662 prediction 0.710777874672665 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48753026 chr17:48753029 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_50107 0 0 1 EIF3H POSTAR2 ENCODE chr17:48753007-48753136
64251 chr9 97218576 97218576 1 + A C rs138907021 97218572 + 97218552 97218592 41 CATGTCCAGCATCACGTTTCCGGCAATCAGTGCCCTCGTCT CATGTCCAGCATCACGTTTCCGGCCATCAGTGCCCTCGTCT < 41bp 0.854394673095109 0.490263198796959 0.79647124 0.54195446 prediction 0.708789346190218 Functional Loss - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97218572 chr9:97218576 synonymous SNV . 0 25 hm5C_associated_SNPs_50108 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:97218533-97218579
64251 chr1 160182974 160182974 1 + A C ACC 160182970 + 160182950 160182990 41 CTACTCACTATGGTGGTTGACTACAGAACCCGTGTGCTGAA CTACTCACTATGGTGGTTGACTACCGAACCCGTGTGCTGAA < 41bp 0.853285282546537 0.476315024173663 0.90770733 0.053411007 prediction 0.706570565093074 Functional Loss - PEA15 ENSG00000162734 CDS Human protein_coding chr1:160182970 chr1:160182974 synonymous SNV . 0 25 hm5C_associated_SNPs_50115 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:160182931-160182998
64251 chrX 70514336 70514336 1 + A C UCS 70514332 + 70514312 70514352 41 TCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGATGC TCTCAGGGAAGCCAGCTGCTCGGACAGCTCTGGACAGATGC < 41bp 0.860095147479531 0.507246827676536 0.74554354 0.71718043 prediction 0.70569663960599 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70514332 chrX:70514336 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_50120 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:70514297-70514370
64251 chrX 70602911 70602911 1 + A C LUSC 70602907 + 70602887 70602927 41 ACATGGGGCCCATCAAACTCCGGCAGTTCCATCGCCCACCT ACATGGGGCCCATCAAACTCCGGCCGTTCCATCGCCCACCT < 41bp 0.852438014737787 0.497286301192726 0.911861 0.89945793 prediction 0.704876029475574 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70602907 chrX:70602911 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_50123 0 0 1 GRWD1 POSTAR2 ENCODE chrX:70602840-70602920
64251 chr12 57910051 57910051 1 + A C LIHC 57910047 + 57910027 57910067 41 GGCAAAAACGTCCCCGAAGCCAGCAGTTGTAGAGACTGTTA GGCAAAAACGTCCCCGAAGCCAGCCGTTGTAGAGACTGTTA < 41bp 0.85194202423364 0.499664359750093 0.50988615 0.2058866 prediction 0.703884048467281 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57910047 chr12:57910051 synonymous SNV . 0 25 hm5C_associated_SNPs_50124 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917662 chr12:57910020-57910060
64251 chr9 990401 990401 1 + A C rs187176004 990397 + 990377 990417 41 CAACGGTGCTTGAGCTCATCCTCAAGGGCTGTGGCGGGGAC CAACGGTGCTTGAGCTCATCCTCACGGGCTGTGGCGGGGAC < 41bp 0.876893374293966 0.525030248782694 0.065434664 0.030771226 prediction 0.703726251022543 Functional Loss - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990397 chr9:990401 nonsynonymous SNV 0.984 4 25 hm5C_associated_SNPs_50125 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:990390-990413
64251 chr17 48539903 48539903 1 + A C rs202105387 48539899 + 48539879 48539919 41 TGGACCAGCTCCAATACAACCAGCAGTTCCTGTCCTGCCAT TGGACCAGCTCCAATACAACCAGCCGTTCCTGTCCTGCCAT < 41bp 0.87408333167986 0.522462467940517 0.90767574 0.87209547 prediction 0.703241727478687 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48539899 chr17:48539903 nonsynonymous SNV 0.961 0 25 hm5C_associated_SNPs_50126 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48539888-48539982
64251 chr5 225597 225597 1 + A C UCEC 225593 + 225573 225613 41 AACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGA AACTGGAGGTGGCATTTCTACGACCCCGTGAAGGGCTCCGA < 41bp 0.868889621913804 0.517407198029806 0.1883738 0.21741441 prediction 0.702964847767996 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:225593 chr5:225597 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_50128 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr5:225580-225600
64251 chr16 2571123 2571123 1 + A C GBM 2571119 + 2571099 2571139 41 CTTCCCCACCGGAGGTTTATCACAAGGTGAGGTGAGGCTCC CTTCCCCACCGGAGGTTTATCACACGGTGAGGTGAGGCTCC < 41bp 0.856767147830467 0.505451527797189 0.6615617 0.3735469 prediction 0.702631240066557 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2571119 chr16:2571123 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_50132 0 0 1 PRPF8 POSTAR2 ENCODE chr16:2571123-2571166
64251 chr12 53776146 53776146 1 + A C UCEC 53776142 + 53776122 53776162 41 AGCAATGGCAGTGAGTCTTCCAAGAATCGCACAGTCTCTGG AGCAATGGCAGTGAGTCTTCCAAGCATCGCACAGTCTCTGG < 41bp 0.856686100846585 0.505711510436443 0.40285158 0.29676497 prediction 0.701949180820283 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776142 chr12:53776146 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_50133 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:53776108-53776159
64251 chr14 20924919 20924919 1 + A C rs535864709 20924915 + 20924895 20924935 41 AGCTGAACTTCAGGAGCTGCCTGGACTCTCTCATCAATACT AGCTGAACTTCAGGAGCTGCCTGGCCTCTCTCATCAATACT < 41bp 0.850928297566241 0.481126779499829 0.05496314 0.16836467 prediction 0.701856595132481 Functional Loss - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20924915 chr14:20924919 synonymous SNV . 0 25 hm5C_associated_SNPs_50135 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:20924834-20924964
64251 chr16 74336160 74336160 1 + A C GBM 74336156 + 74336136 74336176 41 GAAGGACCTAGGGCTGCCTACAGAAGCGTACATTTCAGTGG GAAGGACCTAGGGCTGCCTACAGACGCGTACATTTCAGTGG < 41bp 0.860795744861685 0.509960196486515 0.7815135 0.55114853 prediction 0.701671096750339 Functional Loss - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74336156 chr16:74336160 nonsynonymous SNV 0.974 1 25 hm5C_associated_SNPs_50136 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:74336112-74336165
64251 chr11 32608583 32608583 1 + A C UCEC 32608579 + 32608559 32608599 41 CTGCTGAGCTTCGTGCTTATCTGAAATCTAAAGGAGCTGAG CTGCTGAGCTTCGTGCTTATCTGACATCTAAAGGAGCTGAG < 41bp 0.853408500374899 0.50277107795973 0.22628078 0.17607749 prediction 0.701274844830339 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32608579 chr11:32608583 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50138 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32608555-32608690
64251 chr3 88202563 88202563 1 + A C UCEC 88202559 + 88202539 88202579 41 ACTGGCAAAAGCAACCACAACTGAAATTGAAGGAAACGCCA ACTGGCAAAAGCAACCACAACTGACATTGAAGGAAACGCCA < 41bp 0.850404398281901 0.47966284406188 0.3550615 0.13842449 prediction 0.700808796563803 Functional Loss - C3orf38 ENSG00000179021 CDS Human protein_coding chr3:88202559 chr3:88202563 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_50140 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:88202540-88202572
64251 chr17 76060954 76060954 1 + A C rs61730171 76060950 + 76060930 76060970 41 CAGCGGGTGGGGAGATCACCCTGCAGAGCCGCCGGTGGCAT CAGCGGGTGGGGAGATCACCCTGCCGAGCCGCCGGTGGCAT < 41bp 0.850047398784019 0.474471394701667 0.4991662 0.6217124 prediction 0.700094797568039 Functional Loss - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76060950 chr17:76060954 synonymous SNV . 0 25 hm5C_associated_SNPs_50143 0 0 2 BUD13 POSTAR2 ENCODE chr17:76060926-76061037
64251 chr3 45714197 45714197 1 + G T BLCA 45714194 + 45714174 45714214 41 TGCTCCAGATCCTGCAAGCCCTGGGGAAGTCCTACCACCCC TGCTCCAGATCCTGCAAGCCCTGTGGAAGTCCTACCACCCC < 41bp 0.855598086714895 0.505637089164304 0.8989835 0.7192729 prediction 0.699921995101182 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45714194 chr3:45714197 nonsynonymous SNV 0.988 5 24 hm5C_associated_SNPs_50146 0 0 7 BUD13 POSTAR2 ENCODE chr3:45714171-45714229
64251 chr12 113629440 113629440 1 + A C rs141982884 113629436 + 113629416 113629456 41 CTCACCCACCTGAATGTCCCCAGCACTGGTCATCCAGCCAC CTCACCCACCTGAATGTCCCCAGCCCTGGTCATCCAGCCAC < 41bp 0.851598716530108 0.501670411690876 0.060611308 0.037977934 prediction 0.699856609678463 Functional Loss - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629436 chr12:113629440 nonsynonymous SNV 0.904 0 25 hm5C_associated_SNPs_50147 0 0 1 PCBP2 POSTAR2 ENCODE chr12:113629402-113629466
64251 chr22 35785917 35785917 1 + G T THYM 35785914 + 35785894 35785934 41 CCAAGGACCAGAGCCCCTCACGGGCACCAGGGCTTCGCCAG CCAAGGACCAGAGCCCCTCACGGTCACCAGGGCTTCGCCAG < 41bp 0.858092593359555 0.508246627660115 0.90710104 0.754697 prediction 0.699691931398881 Functional Loss - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35785914 chr22:35785917 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_50148 0 0 1 RPS3 POSTAR2 ENCODE chr22:35785867-35785937
64251 chr12 50232398 50232398 1 - T G STAD 50232402 - 50232382 50232422 41 GGGCAGCTGCAAGGCGTCTCCGAAAGCTGGGACTCCATGAT GGGCAGCTGCAAGGCGTCTCCGAACGCTGGGACTCCATGAT < 41bp 0.853181116230668 0.503367712185768 0.77420175 0.5368238 prediction 0.699626808089801 Functional Loss - BCDIN3D ENSG00000186666 CDS Human protein_coding chr12:50232402 chr12:50232398 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_50149 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:50232334-50232416
64251 chrX 48558921 48558921 1 + A C UCS 48558917 + 48558897 48558937 41 GCTGCCCGGGGGCGTCACTGCACAAGTTTGCCTACAATGAC GCTGCCCGGGGGCGTCACTGCACACGTTTGCCTACAATGAC < 41bp 0.849557187847547 0.477194214006055 0.22028074 0.10722324 prediction 0.699114375695094 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48558917 chrX:48558921 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_50159 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chrX:48558920-48558940
64251 chr9 91961856 91961856 1 + A C COAD 91961852 + 91961832 91961872 41 TCAGGGGAGAGAGGCCGCCGCATGAGTCAAATGAAGACCCC TCAGGGGAGAGAGGCCGCCGCATGCGTCAAATGAAGACCCC < 41bp 0.85572112953695 0.50643312350983 0.24937141 0.21318987 prediction 0.698576012054239 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91961852 chr9:91961856 nonsynonymous SNV 0.047 1 25 hm5C_associated_SNPs_50160 0 0 4 DDX24 POSTAR2 ENCODE chr9:91961789-91961866
64251 chr3 14485210 14485210 1 + G T CESC 14485207 + 14485187 14485227 41 GGACATCCTGAAGCCCTCACCAGGGAAGAGCCCAGGCACGC GGACATCCTGAAGCCCTCACCAGTGAAGAGCCCAGGCACGC < 41bp 0.851942197370385 0.502667176728099 0.8896055 0.28255165 prediction 0.698550041284573 Functional Loss - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14485207 chr3:14485210 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_50161 0 0 4 DDX24 POSTAR2 ENCODE chr3:14485137-14485221
64251 chr19 19162680 19162680 1 + G T UCEC 19162677 + 19162657 19162697 41 AGCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCTAGTG AGCCAGACCTCCTGGATGCCCAGTGCCTGCAGCTCCTAGTG < 41bp 0.849227953251815 0.492530787010445 0.89887303 0.3940166 prediction 0.698455906503631 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19162677 chr19:19162680 nonsynonymous SNV 0.115 4 24 hm5C_associated_SNPs_50162 0 0 3 FMR1 POSTAR2 ENCODE chr19:19162577-19162692
64251 chr14 76964593 76964593 1 + A C LUSC 76964589 + 76964569 76964609 41 TCGAGGATCTAGAGGCTGTCCAGAAGCTGCAGGACCTGCTG TCGAGGATCTAGAGGCTGTCCAGACGCTGCAGGACCTGCTG < 41bp 0.848863285207032 0.496488659102468 0.796069 0.6404163 prediction 0.697726570414063 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76964589 chr14:76964593 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_50167 0 0 2 UCHL5 POSTAR2 ENCODE chr14:76964586-76964688
64251 chr19 36611662 36611662 1 + G T LUSC 36611659 + 36611639 36611679 41 GGTGAGTATGAGGACGTGTCCCGGGTGGAGAAGTACACGAT GGTGAGTATGAGGACGTGTCCCGTGTGGAGAAGTACACGAT < 41bp 0.852693715719943 0.504273728286787 0.9177927 0.37727588 prediction 0.696839974866311 Functional Loss - TBCB ENSG00000105254 CDS Human protein_coding chr19:36611659 chr19:36611662 synonymous SNV . 0 24 hm5C_associated_SNPs_50176 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr19:36611623-36611670
64251 chr14 23237290 23237290 1 + G T LIHC 23237287 + 23237267 23237307 41 AGAGCTTCGCTGAACTGGGGCTGGGGTCATACACCCCAGTG AGAGCTTCGCTGAACTGGGGCTGTGGTCATACACCCCAGTG < 41bp 0.861072091678046 0.51301891692383 0.8244276 0.33725524 prediction 0.696106349508432 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23237287 chr14:23237290 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_50180 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:23237248-23237335
64251 chr19 49376608 49376608 1 + G T LUAD 49376605 + 49376585 49376625 41 CCTGGAGCCGCCTGAGGGGCCTGGGACCTCTAGAGCCCTGG CCTGGAGCCGCCTGAGGGGCCTGTGACCTCTAGAGCCCTGG < 41bp 0.851685466238177 0.503712297822194 0.7384531 0.3822904 prediction 0.695946336831967 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376605 chr19:49376608 stopgain 0.259 0 24 hm5C_associated_SNPs_50183 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49376589-49376631
64251 chr11 64802344 64802344 1 + G T UCEC 64802341 + 64802321 64802361 41 CGGTTTGAAGCCTCAGTGATCGAGGAGCGGCGAAAGGGGGC CGGTTTGAAGCCTCAGTGATCGATGAGCGGCGAAAGGGGGC < 41bp 0.855329624065357 0.507454962451543 0.9300753 0.7529925 prediction 0.695749323227629 Functional Loss - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64802341 chr11:64802344 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_50186 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64802325-64802363
64251 chr16 50136229 50136229 1 + A C UCEC 50136225 + 50136205 50136245 41 AGATCCTTCCCTTGTGGTAGCAGGAGAAGCTTTGGATGCCC AGATCCTTCCCTTGTGGTAGCAGGCGAAGCTTTGGATGCCC < 41bp 0.852274028182342 0.504555997234746 0.92612517 0.90976506 prediction 0.695436061895193 Functional Loss - HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50136225 chr16:50136229 synonymous SNV . 0 25 hm5C_associated_SNPs_50191 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:50136221-50136251
64251 chr8 21959251 21959251 1 + G T UCEC 21959248 + 21959228 21959268 41 TGCAGCTCCCGCGTCGCCTCCTGGGGCTGGCCTCTGACCCC TGCAGCTCCCGCGTCGCCTCCTGTGGCTGGCCTCTGACCCC < 41bp 0.847436328377823 0.485710593091594 0.8190359 0.07674289 prediction 0.694872656755646 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21959248 chr8:21959251 nonsynonymous SNV 0.598 4 24 hm5C_associated_SNPs_50202 0 0 1 MTPAP POSTAR2 ENCODE chr8:21959218-21959254
64251 chrX 47039407 47039407 1 + G T LUSC 47039404 + 47039384 47039424 41 ACAAGCAGACCCAACTGAACCGCGGCTTTGCCTTCATCCAG ACAAGCAGACCCAACTGAACCGCTGCTTTGCCTTCATCCAG < 41bp 0.848021658098626 0.500589048286384 0.32276404 0.053966224 prediction 0.694865219624484 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47039404 chrX:47039407 nonsynonymous SNV 0.938 4 24 hm5C_associated_SNPs_50203 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:47039398-47039436
64251 chr12 64879736 64879736 1 + A C LUSC 64879732 + 64879712 64879752 41 ACAGGGGTTGTGTGTTATGCCTGCAGAATTGCCAGTACCTT ACAGGGGTTGTGTGTTATGCCTGCCGAATTGCCAGTACCTT < 41bp 0.847396764946286 0.48407217351613 0.12375343 0.029556692 prediction 0.694793529892572 Functional Loss - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64879732 chr12:64879736 synonymous SNV . 0 25 hm5C_associated_SNPs_50205 0 0 3 DDX24 POSTAR2 ENCODE chr12:64879735-64879783
64251 chr19 56190062 56190062 1 + G T UCEC 56190059 + 56190039 56190079 41 AACTACTCAGAGGCGGAGATCAAGGTTCGAGAGGCCACGAG AACTACTCAGAGGCGGAGATCAATGTTCGAGAGGCCACGAG < 41bp 0.854845803440753 0.507450263029098 0.935645 0.9148931 prediction 0.694791080823309 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56190059 chr19:56190062 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50206 0 0 5 DDX24 POSTAR2 ENCODE chr19:56190026-56190096
64251 chr20 56140691 56140691 1 + A C GBM 56140687 + 56140667 56140707 41 CCAAGGAGGATGCCCTGAACCTGAAAGGCCTGGGGCACATC CCAAGGAGGATGCCCTGAACCTGACAGGCCTGGGGCACATC < 41bp 0.874069283083804 0.52668902745302 0.063987434 0.013708442 prediction 0.69476051126157 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140687 chr20:56140691 nonsynonymous SNV 0.967 0 25 hm5C_associated_SNPs_50207 0 0 1 RBM15 POSTAR2 ENCODE chr20:56140628-56140705
64251 chr1 156348152 156348152 1 + A C UCEC 156348148 + 156348128 156348168 41 AGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTACCAT AGCTGGAGAAGAGCAAGCACCGCCCGGGCTCCGTCTACCAT < 41bp 0.879013614305683 0.531650058766396 0.2538256 0.09595212 prediction 0.694727111078574 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348148 chr1:156348152 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_50208 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156348100-156348182
64251 chr14 24909475 24909475 1 - C A rs3211056 24909478 - 24909458 24909498 41 AATGCTGAGTTTGCCCAGACCTTGGGTGCTGCCCTGGGCCG AATGCTGAGTTTGCCCAGACCTTTGGTGCTGCCCTGGGCCG < 41bp 0.847328868685224 0.491913016416902 0.13058725 0.073295385 prediction 0.694657737370448 Functional Loss - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909478 chr14:24909475 nonsynonymous SNV 0.957 1 24 hm5C_associated_SNPs_50209 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:24909474-24909475
64251 chr11 63960753 63960753 1 + G T LUAD 63960750 + 63960730 63960770 41 ACTGTCGACCTAAAGCCTGACTGGGGCAAGGTCAGCTGTGG ACTGTCGACCTAAAGCCTGACTGTGGCAAGGTCAGCTGTGG < 41bp 0.847206409934576 0.500083385020537 0.51412374 0.114049315 prediction 0.694246049828077 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63960750 chr11:63960753 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50214 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:63960703-63960756
64251 chr9 100071729 100071729 1 + A C BLCA 100071725 + 100071705 100071745 41 GTCCACTCCCTGGCGGCCACCAGGAAGCGGGCTGCAGAGCG GTCCACTCCCTGGCGGCCACCAGGCAGCGGGCTGCAGAGCG < 41bp 0.847082167183015 0.496523140698961 0.8420088 0.43774217 prediction 0.69416433436603 Functional Loss - CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100071725 chr9:100071729 nonsynonymous SNV 0.222 0 25 hm5C_associated_SNPs_50216 0 0 3 DDX24 POSTAR2 ENCODE chr9:100071694-100071762
64251 chr7 100320317 100320317 1 + G T LGG 100320314 + 100320294 100320334 41 AGCAGGCCGTAGAAGTCTGGCAGGGCCTGGCCCTGCTGTCG AGCAGGCCGTAGAAGTCTGGCAGTGCCTGGCCCTGCTGTCG < 41bp 0.847032157228389 0.487575412787519 0.8964511 0.30833435 prediction 0.694064314456777 Functional Loss - EPO ENSG00000130427 CDS Human protein_coding chr7:100320314 chr7:100320317 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_50218 0 0 1 PPIG POSTAR2 ENCODE chr7:100320266-100320317
64251 chr20 3194649 3194649 1 + G T LUAD 3194646 + 3194626 3194666 41 TGCAGGTACAGGGGCCCGTGCTGGTTGAGGACACTTGTCTG TGCAGGTACAGGGGCCCGTGCTGTTTGAGGACACTTGTCTG < 41bp 0.846815367469618 0.490189230173171 0.4335707 0.3626452 prediction 0.693630734939235 Functional Loss - ITPA ENSG00000125877 CDS Human protein_coding chr20:3194646 chr20:3194649 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_50221 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:3194605-3194659
64251 chr20 35125297 35125297 1 + A C COAD 35125293 + 35125273 35125313 41 TGAGCAACTCGTCGGACAGCCTGGACAGCAGTACCCGACCG TGAGCAACTCGTCGGACAGCCTGGCCAGCAGTACCCGACCG < 41bp 0.85939414615074 0.512720721903522 0.23822802 0.12081507 prediction 0.693346848494436 Functional Loss - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35125293 chr20:35125297 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50226 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486178 chr20:35125297-35125298
64251 chr12 6939612 6939612 1 + G T UCEC 6939609 + 6939589 6939629 41 GCTCTTCAGGGGAGCCTGGCCCAGATGGAGAGCTGCCGTGC GCTCTTCAGGGGAGCCTGGCCCATATGGAGAGCTGCCGTGC < 41bp 0.846443237819932 0.497731079903382 0.8216476 0.28641826 prediction 0.692886475639865 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6939609 chr12:6939612 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_50228 0 0 3 NOL12 POSTAR2 ENCODE chr12:6939595-6939712
64251 chr10 102743193 102743193 1 + G T SARC 102743190 + 102743170 102743210 41 GCATGGGCCTGAGCGATGGGCAGGGTGGCTACCGTGTGGGC GCATGGGCCTGAGCGATGGGCAGTGTGGCTACCGTGTGGGC < 41bp 0.855944537013008 0.509520034735814 0.91115284 0.53044635 prediction 0.69284900455439 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743190 chr10:102743193 nonsynonymous SNV 0.926 0 24 hm5C_associated_SNPs_50229 0 0 5 BUD13 POSTAR2 ENCODE chr10:102743192-102743232
64251 chr20 45801423 45801423 1 + G T SARC 45801420 + 45801400 45801440 41 AGCCAACCTGTGCCTGGGCTCTGGCGTGCACGGCGGCGTGG AGCCAACCTGTGCCTGGGCTCTGTCGTGCACGGCGGCGTGG < 41bp 0.847081259764886 0.500667290511876 0.60847276 0.07556763 prediction 0.692827938506021 Functional Loss - EYA2 ENSG00000064655 CDS Human protein_coding chr20:45801420 chr20:45801423 nonsynonymous SNV 0.163 5 24 hm5C_associated_SNPs_50230 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:45801407-45801440
64251 chr19 10202874 10202874 1 + G T UCEC 10202871 + 10202851 10202891 41 CTGTGGCCACCTGCTTGAGCCAGGGTGGCCTCCTGGAAGAC CTGTGGCCACCTGCTTGAGCCAGTGTGGCCTCCTGGAAGAC < 41bp 0.846403119915445 0.497524884540642 0.9320626 0.25530356 prediction 0.692806239830889 Functional Loss - C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10202871 chr19:10202874 nonsynonymous SNV 0.612 1 24 hm5C_associated_SNPs_50231 0 0 2 PPIG POSTAR2 ENCODE chr19:10202856-10202900
64251 chr6 127608601 127608601 1 + A C rs182455312 127608597 + 127608577 127608617 41 ATCTTCAGGCAGGGTACCAGCACCAGACACCTCCATTGAAG ATCTTCAGGCAGGGTACCAGCACCCGACACCTCCATTGAAG < 41bp 0.865704802417726 0.519356539845652 0.0016501546 0.0009471774 prediction 0.692696525144148 Functional Loss - RNF146 ENSG00000118518 CDS Human protein_coding chr6:127608597 chr6:127608601 synonymous SNV . 0 25 hm5C_associated_SNPs_50232 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:127608582-127608602
64251 chr6 33423556 33423556 1 + G T SARC 33423553 + 33423533 33423573 41 AAGATGATGATGATGAGGACCAGGGGTCAGCCACACTCTCT AAGATGATGATGATGAGGACCAGTGGTCAGCCACACTCTCT < 41bp 0.853391967761498 0.507070313491424 0.89525783 0.61958086 prediction 0.692643308540149 Functional Loss - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33423553 chr6:33423556 nonsynonymous SNV 0.935 2 24 hm5C_associated_SNPs_50233 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:33423538-33423571
64251 chr1 206664168 206664168 1 + G T UCEC 206664165 + 206664145 206664185 41 CCTCCAGGGCTTGGCTACAACGAGGAGCAGATTCACAAGCT CCTCCAGGGCTTGGCTACAACGATGAGCAGATTCACAAGCT < 41bp 0.846192320879271 0.492206345666833 0.8702977 0.24118504 prediction 0.692384641758543 Functional Loss - IKBKE ENSG00000143466 CDS Human other chr1:206664165 chr1:206664168 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_50238 0 0 1 BUD13 POSTAR2 ENCODE chr1:206664150-206664177
64251 chr16 30016820 30016820 1 + A C rs143249661 30016816 + 30016796 30016836 41 GCCCGGCGCCCTCCCCGTGCCAGCACACACGAGTCCAGCTT GCCCGGCGCCCTCCCCGTGCCAGCCCACACGAGTCCAGCTT < 41bp 0.857144673915575 0.511067848274269 0.14799428 0.14073011 prediction 0.692153651282613 Functional Loss - INO80E ENSG00000169592 UTR3 Human protein_coding chr16:30016816 chr16:30016820 . . 0 25 hm5C_associated_SNPs_50241 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30016699-30016887
64251 chr3 179080232 179080232 1 + A C UCEC 179080228 + 179080208 179080248 41 ACGTGTGTTTTGGCCAAAAGCAAAATGTGCCCTCTTGAGAG ACGTGTGTTTTGGCCAAAAGCAAACTGTGCCCTCTTGAGAG < 41bp 0.846064463484088 0.483348204562525 0.3052908 0.15350083 prediction 0.692128926968176 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179080228 chr3:179080232 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50242 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr3:179080231-179080266
64251 chr9 33295160 33295160 1 + A C STAD 33295156 + 33295136 33295176 41 GGAAGTGGAGGGGGCCAGGCCACGACCAGGCAGAAATCCAC GGAAGTGGAGGGGGCCAGGCCACGCCCAGGCAGAAATCCAC < 41bp 0.846008907040671 0.466256740424486 0.32279736 0.22678658 prediction 0.692017814081342 Functional Loss - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295156 chr9:33295160 synonymous SNV . 0 25 hm5C_associated_SNPs_50245 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:33295160-33295161
64251 chr1 151491244 151491244 1 + G T GBM 151491241 + 151491221 151491261 41 GACTCCTTTGGGGTCCAAATCAAGGGGGCCAATGACCAAGG GACTCCTTTGGGGTCCAAATCAATGGGGCCAATGACCAAGG < 41bp 0.845857268127085 0.490113634013299 0.94376504 0.34971297 prediction 0.69171453625417 Functional Loss - CGN ENSG00000143375 CDS Human protein_coding chr1:151491241 chr1:151491244 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_50247 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chr1:151491233-151491254
64251 chr15 40751136 40751136 1 + A C SKCM 40751132 + 40751112 40751152 41 ATCCCCACCGCAGCCGTGACCGTGATCGTGCTACTGGGGGC ATCCCCACCGCAGCCGTGACCGTGCTCGTGCTACTGGGGGC < 41bp 0.855150220864741 0.509358163569078 0.3748845 0.30747154 prediction 0.691584114591326 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751132 chr15:40751136 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_50248 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:40751135-40751136
64251 chr16 29708661 29708661 1 + G T GBM 29708658 + 29708638 29708678 41 TCTCCATGGGGATGCTGACCCAGGCGGCCCCAGCCCTTGAT TCTCCATGGGGATGCTGACCCAGTCGGCCCCAGCCCTTGAT < 41bp 0.850285132808975 0.504577525595668 0.8963639 0.07751739 prediction 0.691415214426613 Functional Loss - QPRT ENSG00000103485 CDS Human protein_coding chr16:29708658 chr16:29708661 nonsynonymous SNV 0.955 1 24 hm5C_associated_SNPs_50252 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:29708645-29708676
64251 chr19 51729262 51729262 1 + A C LUSC 51729258 + 51729238 51729278 41 ACCCCACGGCCCCAGGACCACGGCACCAACCTGACCTGTCA ACCCCACGGCCCCAGGACCACGGCCCCAACCTGACCTGTCA < 41bp 0.854864976133095 0.50929389112598 0.54747695 0.58757126 prediction 0.69114217001423 Functional Loss - CD33 ENSG00000105383 CDS Human protein_coding chr19:51729258 chr19:51729262 nonsynonymous SNV 0.483 3 25 hm5C_associated_SNPs_50256 0 0 3 IGF2BP2 POSTAR2 ENCODE chr19:51729074-51729290
64251 chr14 102918939 102918939 1 + G T LUAD 102918936 + 102918916 102918956 41 AGCTGCCCCACGGGCATGCACTGGACCAGGCTGGACCTCTC AGCTGCCCCACGGGCATGCACTGTACCAGGCTGGACCTCTC < 41bp 0.84581583037119 0.500526154717459 0.8509744 0.22620061 prediction 0.690579351307463 Functional Loss - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102918936 chr14:102918939 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_50266 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102918933-102918960
64251 chr2 233322749 233322749 1 + G T GBM 233322746 + 233322726 233322766 41 ACACGAAATATGAGATCCACCGAGACCCCACACTGGACCCC ACACGAAATATGAGATCCACCGATACCCCACACTGGACCCC < 41bp 0.847373292001853 0.502107233794798 0.16750902 0.020171493 prediction 0.69053211641411 Functional Loss - ALPI ENSG00000163295 CDS Human protein_coding chr2:233322746 chr2:233322749 nonsynonymous SNV 0.007 5 24 hm5C_associated_SNPs_50267 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr2:233322739-233322760
64251 chr2 238990744 238990744 1 + G T LUSC 238990741 + 238990721 238990761 41 GAACCAGGAACGGGTGGCAGCTGGGCTACCTCCCATCCTCG GAACCAGGAACGGGTGGCAGCTGTGCTACCTCCCATCCTCG < 41bp 0.845203035198269 0.481777492478625 0.8678849 0.21555248 prediction 0.690406070396538 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990741 chr2:238990744 nonsynonymous SNV 0.103 1 24 hm5C_associated_SNPs_50269 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:238990737-238990769
64251 chr19 5657268 5657268 1 + A C HNSC 5657264 + 5657244 5657284 41 TGAACTAGGCTTCCAAAAGCCAGGATCGCAAATCAGCCAGC TGAACTAGGCTTCCAAAAGCCAGGCTCGCAAATCAGCCAGC < 41bp 0.84513359568604 0.480586436916628 0.8458047 0.80961406 prediction 0.690267191372079 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5657264 chr19:5657268 nonsynonymous SNV 0.947 4 25 hm5C_associated_SNPs_50271 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:5657252-5657279
64251 chr16 4745126 4745126 1 + A C LUSC 4745122 + 4745102 4745142 41 GAAGCTGGTTGAGGCCCTGGCTGCAGCCACCGAGAAGCAGA GAAGCTGGTTGAGGCCCTGGCTGCCGCCACCGAGAAGCAGA < 41bp 0.844844708900347 0.499195592240333 0.14382651 0.059757203 prediction 0.689689417800694 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4745122 chr16:4745126 synonymous SNV . 0 25 hm5C_associated_SNPs_50276 0 0 1 GRWD1 POSTAR2 ENCODE chr16:4745061-4745141
64251 chr19 3119349 3119349 1 + A C PAAD 3119345 + 3119325 3119365 41 CGCACCTGGTGGACTACTTCCCCGAGTTCGATGGTGCGCCG CGCACCTGGTGGACTACTTCCCCGCGTTCGATGGTGCGCCG < 41bp 0.860626082735287 0.515938132178469 0.46492568 0.18699628 prediction 0.689375901113637 Functional Loss - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119345 chr19:3119349 nonsynonymous SNV 0.861 2 25 hm5C_associated_SNPs_50279 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:3119311-3119351
64251 chr12 49220793 49220793 1 + G T BLCA 49220790 + 49220770 49220810 41 TGATTCTGGATGAGAACCAGCTGGAGGATGCCTGTGAGCAC TGATTCTGGATGAGAACCAGCTGTAGGATGCCTGTGAGCAC < 41bp 0.846290416968933 0.50178808787263 0.18152103 0.123824686 prediction 0.689004658192607 Functional Loss - CACNB3 ENSG00000167535 CDS Human protein_coding chr12:49220790 chr12:49220793 stopgain 0.996 1 24 hm5C_associated_SNPs_50289 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:49220767-49220805
64251 chr1 161089367 161089367 1 + A C UCEC 161089363 + 161089343 161089383 41 GCCAAGACTGGGAGCAGACTCAGAAAATCTACAATTGTCAC GCCAAGACTGGGAGCAGACTCAGACAATCTACAATTGTCAC < 41bp 0.872513683970171 0.528064711448283 0.31385767 0.26315248 prediction 0.688897945043776 Functional Loss - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161089363 chr1:161089367 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50291 0 0 5 BUD13 POSTAR2 ENCODE chr1:161089313-161089384
64251 chrX 19371255 19371255 1 + G T UCEC 19371252 + 19371232 19371272 41 GGATCGATGCACATGTATGCCAAGAACTTCTACGGGGGCAA GGATCGATGCACATGTATGCCAATAACTTCTACGGGGGCAA < 41bp 0.852650602910635 0.508217334339501 0.16568989 0.14317349 prediction 0.688866537142268 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19371252 chrX:19371255 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50292 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:19371230-19371286
64251 chr13 111371715 111371715 1 + G T SARC 111371712 + 111371692 111371732 41 GGCGACGAGAAGATCCAGATCGTGAGCCAGATGGTGGAGCT GGCGACGAGAAGATCCAGATCGTTAGCCAGATGGTGGAGCT < 41bp 0.844416020943481 0.499684342748059 0.7106194 0.5329101 prediction 0.688832041886961 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371712 chr13:111371715 synonymous SNV . 0 24 hm5C_associated_SNPs_50294 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr13:111371695-111371721
64251 chr1 28861844 28861844 1 + G T LUAD 28861841 + 28861821 28861861 41 GCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTA GCTGCGGGGAACAGGGCCAGCTATGCCGTGTGCCTGAGTTA < 41bp 0.844379666676733 0.490585417862285 0.24151722 0.24793682 prediction 0.688759333353465 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861841 chr1:28861844 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_50296 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28861832-28861860
64251 chr1 179310301 179310301 1 + G T GBM 179310298 + 179310278 179310318 41 CATTGGGCCACTGGCTATAGCAAGAGTTCTCATCCGCTGAT CATTGGGCCACTGGCTATAGCAATAGTTCTCATCCGCTGAT < 41bp 0.844246716842369 0.498310457836054 0.89373183 0.06393224 prediction 0.688493433684739 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179310298 chr1:179310301 nonsynonymous SNV 0.910 0 24 hm5C_associated_SNPs_50301 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr1:179310284-179310305
64251 chr22 50278438 50278438 1 + A C rs910798 50278434 + 50278414 50278454 41 GCTCAGCTCTGTGTCCTCGTCTCCAGTAAAGCCGGTCAGAG GCTCAGCTCTGTGTCCTCGTCTCCCGTAAAGCCGGTCAGAG < 41bp 0.844131359411989 0.464505599265384 0.96788853 0.51349574 prediction 0.688262718823977 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278434 chr22:50278438 synonymous SNV . 0 25 hm5C_associated_SNPs_50302 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50278438-50278439
64251 chr19 16296291 16296291 1 + A C COAD 16296287 + 16296267 16296307 41 AGCAGGTCCAAAAGGGACCCCTGAAGCTGAAAGGCGTCGCA AGCAGGTCCAAAAGGGACCCCTGACGCTGAAAGGCGTCGCA < 41bp 0.854689703693154 0.510615969286671 0.42401117 0.38121772 prediction 0.688147468812967 Functional Loss - FAM32A ENSG00000105058 CDS Human protein_coding chr19:16296287 chr19:16296291 nonsynonymous SNV 0.954 4 25 hm5C_associated_SNPs_50304 0 0 2 DDX3X POSTAR2 ENCODE chr19:16296225-16296301
64251 chr19 11559781 11559781 1 + G T LUAD 11559778 + 11559758 11559798 41 TTGTCTCGCAGAAACCCAAACTCGGGGGCTCTCCCACCAGC TTGTCTCGCAGAAACCCAAACTCTGGGGCTCTCCCACCAGC < 41bp 0.843947673127049 0.493489731812445 0.37278283 0.14811775 prediction 0.687895346254098 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559778 chr19:11559781 nonsynonymous SNV 0.544 3 24 hm5C_associated_SNPs_50305 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11559773-11559794
64251 chr4 184210688 184210688 1 + A C CESC 184210684 + 184210664 184210704 41 TGCAGGCGCTGAGGGACTTGCGGCAGAAGCTGGAGGAACTG TGCAGGCGCTGAGGGACTTGCGGCCGAAGCTGGAGGAACTG < 41bp 0.855599971446948 0.511723972486103 0.84253895 0.8463229 prediction 0.68775199792169 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184210684 chr4:184210688 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_50307 0 0 4 FMR1 POSTAR2 ENCODE chr4:184210545-184210692
64251 chr8 145584284 145584284 1 + G T UCEC 145584281 + 145584261 145584301 41 GGCTGGGCGGCCTCTCTCTGCTGGGCGTGTTCTGTGGGGGC GGCTGGGCGGCCTCTCTCTGCTGTGCGTGTTCTGTGGGGGC < 41bp 0.843808377913621 0.490675739913773 0.82990134 0.27426183 prediction 0.687616755827242 Functional Loss - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145584281 chr8:145584284 nonsynonymous SNV 0.962 2 24 hm5C_associated_SNPs_50311 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:145584275-145584306
64251 chr20 31427641 31427641 1 + G T UCEC 31427638 + 31427618 31427658 41 GGTGTGGGCAACGGAGACGACGAGGCAGCTGAGTTGATGCA GGTGTGGGCAACGGAGACGACGATGCAGCTGAGTTGATGCA < 41bp 0.843780699522195 0.495203669055479 0.4191328 0.020183355 prediction 0.68756139904439 Functional Loss - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31427638 chr20:31427641 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_50313 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:31427583-31427652
64251 chr19 36277899 36277899 1 + G T LUSC 36277896 + 36277876 36277916 41 ATCTCATACCCCTGCTGCTGCGAGGAGCCGAGGCCCCGCTG ATCTCATACCCCTGCTGCTGCGATGAGCCGAGGCCCCGCTG < 41bp 0.843735359715167 0.489407939024887 0.9207989 0.46444637 prediction 0.687470719430334 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277896 chr19:36277899 stopgain 0.933 0 24 hm5C_associated_SNPs_50315 0 0 1 PPIG POSTAR2 ENCODE chr19:36277889-36277973
64251 chr2 242289548 242289548 1 + G T LUSC 242289545 + 242289525 242289565 41 CGCAGATGCAGATGCAGATGCAGGGCGGGGATGGCGATGGC CGCAGATGCAGATGCAGATGCAGTGCGGGGATGGCGATGGC < 41bp 0.85420955604759 0.510498037034671 0.7205263 0.22357735 prediction 0.687423038025838 Functional Loss - SEPT2 ENSG00000168385 CDS Human protein_coding chr2:242289545 chr2:242289548 nonsynonymous SNV 0.601 2 24 hm5C_associated_SNPs_50316 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:242289499-242289560
64251 chr21 42613849 42613849 1 + G T LUSC 42613846 + 42613826 42613866 41 TGGAGCCGGCTTGCCCGTTGCTGGATCTGGGACCAACGGAG TGGAGCCGGCTTGCCCGTTGCTGTATCTGGGACCAACGGAG < 41bp 0.843617392204306 0.495011956135117 0.84557784 0.6787512 prediction 0.687234784408612 Functional Loss - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42613846 chr21:42613849 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_50319 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:42613849-42613850
64251 chr2 97017653 97017653 1 + G T KIRP 97017650 + 97017630 97017670 41 TTCTGTCCACTCTCCACTGCCAGGACTACAGAAGTGAACTG TTCTGTCCACTCTCCACTGCCAGTACTACAGAAGTGAACTG < 41bp 0.843574524652228 0.493871826126289 0.8833492 0.32191855 prediction 0.687149049304455 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97017650 chr2:97017653 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_50320 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr2:97017615-97017655
64251 chr16 22545897 22545897 1 + G T BRCA 22545894 + 22545874 22545914 41 CCCTCAGCAGATGATAATATCAAGACACCTGCCGAGCGTCT CCCTCAGCAGATGATAATATCAATACACCTGCCGAGCGTCT < 41bp 0.862468004443759 0.518946181142632 0.91602576 0.65414315 prediction 0.687043646602254 Functional Loss - NPIPB5 ENSG00000243716 CDS Human protein_coding chr16:22545894 chr16:22545897 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_50323 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:22545865-22545897
64251 chr19 3613147 3613147 1 - C A rs571677336 3613150 - 3613130 3613170 41 AGGTACAGCCCGCGGCTGCTCACGGCGCACGAGCTGCCACT AGGTACAGCCCGCGGCTGCTCACTGCGCACGAGCTGCCACT < 41bp 0.85137720963486 0.507887564207787 0.546821 0.043989897 prediction 0.686979290854147 Functional Loss - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3613150 chr19:3613147 synonymous SNV . 0 24 hm5C_associated_SNPs_50325 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr19:3613128-3613149
64251 chr19 3193375 3193375 1 + A C rs75377748 3193371 + 3193351 3193391 41 GACGAGGCCCTGCTGTCTATCTACAAGCAGACCCAGGCTGC GACGAGGCCCTGCTGTCTATCTACCAGCAGACCCAGGCTGC < 41bp 0.87637122496231 0.533041910996535 0.51250154 0.056785315 prediction 0.68665862793155 Functional Loss - NCLN ENSG00000125912 CDS Human protein_coding chr19:3193371 chr19:3193375 nonsynonymous SNV 0.892 1 25 hm5C_associated_SNPs_50328 0 0 2 DDX24 POSTAR2 ENCODE chr19:3193351-3193392
64251 chr11 63978128 63978128 1 + A C rs146932041 63978124 + 63978104 63978144 41 ACCATGCTATTTGGTGGGAACAGAAGAGGCAGTGGCTGCTG ACCATGCTATTTGGTGGGAACAGACGAGGCAGTGGCTGCTG < 41bp 0.86085901543717 0.517585162190125 0.41020435 0.2815497 prediction 0.68654770649409 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63978124 chr11:63978128 nonsynonymous SNV 0.987 4 25 hm5C_associated_SNPs_50330 0 0 5 AARS POSTAR2 ENCODE chr11:63978108-63978154
64251 chr1 6269374 6269374 1 + G T LUAD 6269371 + 6269351 6269391 41 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAG ACCTGGAATCGGCTTACGTGCAGTGCTGCGAGCGGCTGGAG < 41bp 0.843608860298842 0.500366607512304 0.9139123 0.80623233 prediction 0.686484505573075 Functional Loss - RNF207 ENSG00000158286 CDS Human protein_coding chr1:6269371 chr1:6269374 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_50336 0 0 7 DDX24 POSTAR2 ENCODE chr1:6269337-6269397
64251 chr16 19126381 19126381 1 + G T LGG 19126378 + 19126358 19126398 41 GCCTGGGCGAGGAGCCAGCGCTGGCCCCGGCCTTCCGCGGC GCCTGGGCGAGGAGCCAGCGCTGTCCCCGGCCTTCCGCGGC < 41bp 0.842972930534408 0.492722004090333 0.8987217 0.7507844 prediction 0.685945861068816 Functional Loss - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126378 chr16:19126381 nonsynonymous SNV 0.052 0 24 hm5C_associated_SNPs_50340 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:19126371-19126399
64251 chrX 70613222 70613222 1 + A C GBM 70613218 + 70613198 70613238 41 GTCAACAGAACAGGCTCGTTCTGGAGAGGGGCCCATGAGTA GTCAACAGAACAGGCTCGTTCTGGCGAGGGGCCCATGAGTA < 41bp 0.842928353242151 0.48566979996162 0.41721937 0.33856913 prediction 0.685856706484302 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70613218 chrX:70613222 synonymous SNV . 0 25 hm5C_associated_SNPs_50342 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chrX:70613203-70613237
64251 chr19 15806829 15806829 1 + G T LUSC 15806826 + 15806806 15806846 41 TCCCCCAGCTCCCTTCATCTCCCGATGCTGCACCCAGGACA TCCCCCAGCTCCCTTCATCTCCCTATGCTGCACCCAGGACA < 41bp 0.854820552739237 0.511965990134836 0.17571878 0.14992896 prediction 0.685709125208802 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15806826 chr19:15806829 nonsynonymous SNV 0.129 4 24 hm5C_associated_SNPs_50348 0 0 2 GRWD1 POSTAR2 ENCODE chr19:15806816-15806880
64251 chr20 61471922 61471922 1 + G T UCEC 61471919 + 61471899 61471939 41 CAAGGCGTGCCCGGCACCAGCAAGGACGGCCAGGACGGTGC CAAGGCGTGCCCGGCACCAGCAATGACGGCCAGGACGGTGC < 41bp 0.849946664881488 0.507128248500748 0.82826406 0.41731092 prediction 0.685636832761479 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61471919 chr20:61471922 nonsynonymous SNV 0.175 4 24 hm5C_associated_SNPs_50349 0 0 5 BUD13 POSTAR2 ENCODE chr20:61471897-61471924
64251 chr1 151259666 151259666 1 + G T rs147172634 151259663 + 151259643 151259683 41 GCCAGTGGACAAGTCTTCCCCAGGAAGTCCCCAGAGTCCCT GCCAGTGGACAAGTCTTCCCCAGTAAGTCCCCAGAGTCCCT < 41bp 0.842728765030584 0.482522020179096 0.7957488 0.3318718 prediction 0.685457530061168 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151259663 chr1:151259666 nonsynonymous SNV 0.605 0 24 hm5C_associated_SNPs_50353 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:151259633-151259671
64251 chr14 105926761 105926761 1 + G T KIRC 105926758 + 105926738 105926778 41 GTCCGACAGCCCAGCCTGCACATGAGCGCCGCAGCTGCCTC GTCCGACAGCCCAGCCTGCACATTAGCGCCGCAGCTGCCTC < 41bp 0.842571626627357 0.491578173288105 0.31475782 0.22851661 prediction 0.685143253254713 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105926758 chr14:105926761 nonsynonymous SNV 0.959 2 24 hm5C_associated_SNPs_50361 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105926738-105926783
64251 chr19 14065217 14065217 1 + G T UCEC 14065214 + 14065194 14065234 41 CCCCGGGTGTGCGTGTCCCTCAAGAACATTGTGGATGAGGA CCCCGGGTGTGCGTGTCCCTCAATAACATTGTGGATGAGGA < 41bp 0.84238691193146 0.490307945133569 0.6705514 0.31645614 prediction 0.684773823862919 Functional Loss - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14065214 chr19:14065217 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_50368 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:14065217-14065245
64251 chr9 71835987 71835987 1 + A C PAAD 71835983 + 71835963 71836003 41 GCCGCAGCTGGGAGGACAGCCCGGAAAGGGGGCGTCCCCAT GCCGCAGCTGGGAGGACAGCCCGGCAAGGGGGCGTCCCCAT < 41bp 0.845119404224978 0.502832395143516 0.7245618 0.56857663 prediction 0.684574018162926 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71835983 chr9:71835987 nonsynonymous SNV 0.698 1 25 hm5C_associated_SNPs_50370 0 0 7 FASTKD2 POSTAR2 ENCODE chr9:71835898-71836025
64251 chr11 66373040 66373040 1 + G T UCEC 66373037 + 66373017 66373057 41 CGGGGAGGCCATCCCTTATCCAAGATCACAGGGAACTCCGG CGGGGAGGCCATCCCTTATCCAATATCACAGGGAACTCCGG < 41bp 0.854707652043468 0.512508028447487 0.811249 0.22212332 prediction 0.684399247191963 Functional Loss - CCS ENSG00000173992 CDS Human protein_coding chr11:66373037 chr11:66373040 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50371 0 0 10 DDX24 POSTAR2 ENCODE chr11:66372979-66373055
64251 chr11 69458005 69458005 1 + G T UCEC 69458002 + 69457982 69458022 41 ACCGACAACTCCATCCGGCCCGAGGAGCTGCTGGTAACCAC ACCGACAACTCCATCCGGCCCGATGAGCTGCTGGTAACCAC < 41bp 0.849948842062142 0.507756168404418 0.6948016 0.051144958 prediction 0.684385347315448 Functional Loss - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69458002 chr11:69458005 nonsynonymous SNV 0.967 0 24 hm5C_associated_SNPs_50373 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:69457985-69458008
64251 chr19 4433275 4433275 1 + G T UCEC 4433272 + 4433252 4433292 41 CGGCTCAAGCGGCTCATTTCCGAGAACTCAGTGTATGAGAA CGGCTCAAGCGGCTCATTTCCGATAACTCAGTGTATGAGAA < 41bp 0.842119572207935 0.496342742046063 0.8863163 0.17565894 prediction 0.68423914441587 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4433272 chr19:4433275 nonsynonymous SNV 0.861 2 24 hm5C_associated_SNPs_50377 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:4433240-4433300
64251 chr16 31230652 31230652 1 + G T LUAD 31230649 + 31230629 31230669 41 GGGGGGCCGTGGGGGAGCAGCTGGGCAAGATGCGGGTGTTC GGGGGGCCGTGGGGGAGCAGCTGTGCAAGATGCGGGTGTTC < 41bp 0.862412226448384 0.520737444840589 0.88876307 0.88134444 prediction 0.68334956321559 Functional Loss - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31230649 chr16:31230652 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_50391 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:31230640-31230660
64251 chr1 12066687 12066687 1 + G T LUSC 12066684 + 12066664 12066704 41 CAGGAGGAGTTCATGGTTTCCATGGTTACCGGCCTGGCCTC CAGGAGGAGTTCATGGTTTCCATTGTTACCGGCCTGGCCTC < 41bp 0.841645351446249 0.482456817868851 0.37100393 0.12015906 prediction 0.683290702892498 Functional Loss - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12066684 chr1:12066687 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_50393 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:12066674-12066708
64251 chr1 32653571 32653571 1 + A C STAD 32653567 + 32653547 32653587 41 GTCCCCAGCTGGAGGAGCACCGGAATTCACAGAAGCAGATG GTCCCCAGCTGGAGGAGCACCGGACTTCACAGAAGCAGATG < 41bp 0.866353765343949 0.524899581625005 0.7744021 0.7589158 prediction 0.682908367437889 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32653567 chr1:32653571 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_50399 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:32653566-32653600
64251 chr11 63990660 63990660 1 + A C BLCA 63990656 + 63990636 63990676 41 GGAATGTCAACTGGGACATCCGGCAGGTGGGCCCAGACCCA GGAATGTCAACTGGGACATCCGGCCGGTGGGCCCAGACCCA < 41bp 0.841371681685726 0.464121615056011 0.5431869 0.3217574 prediction 0.682743363371452 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63990656 chr11:63990660 nonsynonymous SNV 0.980 3 25 hm5C_associated_SNPs_50403 0 0 2 GEMIN5 POSTAR2 ENCODE chr11:63990647-63990662
64251 chr19 2808314 2808314 1 + A C rs556378977 2808310 + 2808290 2808330 41 CTGCGGCAGGATGGGAGCCGCCAGATCGCCATCGCGGCCAT CTGCGGCAGGATGGGAGCCGCCAGCTCGCCATCGCGGCCAT < 41bp 0.841351730176166 0.490552972852192 0.7787902 0.29651782 prediction 0.682703460352332 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2808310 chr19:2808314 nonsynonymous SNV 0.417 0 25 hm5C_associated_SNPs_50405 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:2808268-2808319
64251 chr12 113826320 113826320 1 + G T LUAD 113826317 + 113826297 113826337 41 CTGCTGGCGGCCAGCGGTCCCACGTGGGACCAGGTGCCCCC CTGCTGGCGGCCAGCGGTCCCACTTGGGACCAGGTGCCCCC < 41bp 0.841577466263021 0.50023856706484 0.22269425 0.018277436 prediction 0.682677798396363 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113826317 chr12:113826320 synonymous SNV . 0 24 hm5C_associated_SNPs_50406 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:113826293-113826329
64251 chr2 32983434 32983434 1 + G T UCEC 32983431 + 32983411 32983451 41 ACTGCTTGCTTGGAGATGTCCTCGGAGACCATTCTTGCTAT ACTGCTTGCTTGGAGATGTCCTCTGAGACCATTCTTGCTAT < 41bp 0.842908397686179 0.501590635559519 0.22352466 0.06954491 prediction 0.68263552425332 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32983431 chr2:32983434 stopgain 0.908 0 24 hm5C_associated_SNPs_50408 0 0 1 GRWD1 POSTAR2 ENCODE chr2:32983412-32983460
64251 chr1 15956969 15956969 1 + G T UCEC 15956966 + 15956946 15956986 41 TGGACAATCCAGCCTTGCTCCGAGATATGTTGCTGGCCAAC TGGACAATCCAGCCTTGCTCCGATATATGTTGCTGGCCAAC < 41bp 0.850467305914435 0.50915229405612 0.82406056 0.2559958 prediction 0.68263002371663 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15956966 chr1:15956969 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_50409 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:15956948-15956974
64251 chr19 42814072 42814072 1 + G T LUAD 42814069 + 42814049 42814089 41 AAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAACCAGCCCC AAGCCCTCCCCAAGCCCAGGCAGTGCCCAGGAACCAGCCCC < 41bp 0.841253948068565 0.477509064062782 0.4289359 0.09663835 prediction 0.682507896137129 Functional Loss - PRR19 ENSG00000188368 CDS Human protein_coding chr19:42814069 chr19:42814072 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_50413 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42814038-42814093
64251 chr9 139687410 139687410 1 + A C rs374673899 139687406 + 139687386 139687426 41 ACCCCAGTCGTATCCTCTGTCCGCATGTGTGGCCAGGCCTG ACCCCAGTCGTATCCTCTGTCCGCCTGTGTGGCCAGGCCTG < 41bp 0.842084814357296 0.500834194078642 0.19407377 0.027909696 prediction 0.682501240557309 Functional Loss - TMEM141 ENSG00000244187 UTR3 Human protein_coding chr9:139687406 chr9:139687410 . . 0 25 hm5C_associated_SNPs_50414 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr9:139687375-139687412
64251 chr8 99961349 99961349 1 + G T HNSC 99961346 + 99961326 99961366 41 TGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCAC TGCACATGAACCACTGGACGCTGTGGTATCCCAATGTGCAC < 41bp 0.857280630882093 0.516074552097947 0.33736014 0.010909468 prediction 0.682412157568292 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961346 chr8:99961349 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50417 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:99961340-99961360
64251 chr12 58140483 58140483 1 + G T COAD 58140480 + 58140460 58140500 41 ACCTCACAACCCTGTATCAACAAGATTATGATTTCTGCACT ACCTCACAACCCTGTATCAACAATATTATGATTTCTGCACT < 41bp 0.841167650969746 0.498426583535156 0.23505846 0.13074923 prediction 0.682335301939492 Functional Loss - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140480 chr12:58140483 nonsynonymous SNV 0.613 2 24 hm5C_associated_SNPs_50418 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:58140473-58140501
64251 chr19 36237348 36237348 1 + G T LUSC 36237345 + 36237325 36237365 41 TTTGCTTTCCTGCCTTTTCTCTGGTTGGTCAACATCTTCTG TTTGCTTTCCTGCCTTTTCTCTGTTTGGTCAACATCTTCTG < 41bp 0.85497677110822 0.513814141456365 0.3292532 0.06186667 prediction 0.682325259303711 Functional Loss - PSENEN ENSG00000188223;ENSG00000205155 CDS Human other chr19:36237345 chr19:36237348 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_50419 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36237326-36237352
64251 chr19 36277658 36277658 1 + A C ESCA 36277654 + 36277634 36277674 41 TCCCGCACCTCCCGCCAGCCCAGCACCCCCCGCCCCTGCCT TCCCGCACCTCCCGCCAGCCCAGCCCCCCCCGCCCCTGCCT < 41bp 0.841098275060699 0.467476118635479 0.5160276 0.5115671 prediction 0.682196550121398 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277654 chr19:36277658 synonymous SNV . 0 25 hm5C_associated_SNPs_50421 0 0 2 DDX59 POSTAR2 ENCODE chr19:36277588-36277733
64251 chr19 4359211 4359211 1 + G T BLCA 4359208 + 4359188 4359228 41 CCCCTGACCTCGTGAGGCTCCAGGAACCCTGGAGCCAGGAG CCCCTGACCTCGTGAGGCTCCAGTAACCCTGGAGCCAGGAG < 41bp 0.844473944133705 0.503375799360762 0.75074244 0.14750037 prediction 0.682196289545886 Functional Loss - MPND ENSG00000008382 CDS Human protein_coding chr19:4359208 chr19:4359211 stopgain 0.980 1 24 hm5C_associated_SNPs_50422 0 0 2 PPIG POSTAR2 ENCODE chr19:4359196-4359229
64251 chr16 21261982 21261982 1 + G T HNSC 21261979 + 21261959 21261999 41 GAAGAATTCCTGCCTATCTTCAAGAGAGAGCAGATTGATCT GAAGAATTCCTGCCTATCTTCAATAGAGAGCAGATTGATCT < 41bp 0.842193458628346 0.501095603081105 0.57551736 0.17430723 prediction 0.682195711094481 Functional Loss - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261979 chr16:21261982 nonsynonymous SNV 0.935 0 24 hm5C_associated_SNPs_50423 0 0 1 PPIG POSTAR2 ENCODE chr16:21261919-21261991
64251 chr12 121154483 121154483 1 + A C STAD 121154479 + 121154459 121154499 41 TGGAGACGTGGACATCAGCGCAGGACGTTTTGTCCGCTATC TGGAGACGTGGACATCAGCGCAGGCCGTTTTGTCCGCTATC < 41bp 0.858911952637407 0.517838870572047 0.7527963 0.66632736 prediction 0.68214616413072 Functional Loss - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154479 chr12:121154483 synonymous SNV . 0 25 hm5C_associated_SNPs_50425 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:121154474-121154499
64251 chr2 24245354 24245354 1 + G T SARC 24245351 + 24245331 24245371 41 GTACACATGCCTCCCAGCTACACGACCACGTCCAGGGCCTG GTACACATGCCTCCCAGCTACACTACCACGTCCAGGGCCTG < 41bp 0.841072758142232 0.487768503295478 0.11543539 0.03211549 prediction 0.682145516284464 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24245351 chr2:24245354 nonsynonymous SNV 0.038 1 24 hm5C_associated_SNPs_50426 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:24245352-24245371
64251 chr10 15145430 15145430 1 + G T UCEC 15145427 + 15145407 15145447 41 CGCTGGAGCGCTCTGGAGAGCGAGGATATGCACTTCATCCT CGCTGGAGCGCTCTGGAGAGCGATGATATGCACTTCATCCT < 41bp 0.840867828668233 0.485639134906042 0.865672 0.08208811 prediction 0.681735657336465 Functional Loss - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145427 chr10:15145430 nonsynonymous SNV 0.886 0 24 hm5C_associated_SNPs_50436 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr10:15145412-15145442
64251 chr12 56551301 56551301 1 + G T UCEC 56551298 + 56551278 56551318 41 GAGACCGTTCTGGCAGGACACGAGGACAGCAACGGCTGCAT GAGACCGTTCTGGCAGGACACGATGACAGCAACGGCTGCAT < 41bp 0.846759188250456 0.50593676115533 0.8920372 0.19629285 prediction 0.681644854190252 Functional Loss - MYL6B ENSG00000196465 CDS Human protein_coding chr12:56551298 chr12:56551301 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_50437 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr12:56551288-56551309
64251 chr14 51057742 51057742 1 + A C UCS 51057738 + 51057718 51057758 41 TGGATCTGAGCGAGAGACCACAGGAATTCAGATATGGAGTG TGGATCTGAGCGAGAGACCACAGGCATTCAGATATGGAGTG < 41bp 0.856503888029344 0.515707913887558 0.7670667 0.35437626 prediction 0.681591948283572 Functional Loss - ATL1 ENSG00000198513 CDS Human protein_coding chr14:51057738 chr14:51057742 synonymous SNV . 0 25 hm5C_associated_SNPs_50438 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:51057740-51057760
64251 chr9 138011775 138011775 1 + G T LUAD 138011772 + 138011752 138011792 41 AGCTACCCCAAGCGCAGCGCCGGGGAGGCCTTCATCATCTG AGCTACCCCAAGCGCAGCGCCGGTGAGGCCTTCATCATCTG < 41bp 0.862318766380501 0.521529116485123 0.70473534 0.21815297 prediction 0.681579299790755 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011772 chr9:138011775 synonymous SNV . 0 24 hm5C_associated_SNPs_50439 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:138011730-138011791
64251 chrX 153608673 153608673 1 + G T LUAD 153608670 + 153608650 153608690 41 CCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGTCAGT CCCGAGTCTGCCGGCCCGTCCAGTGCTGTCCGCCAGTCAGT < 41bp 0.877752677433979 0.537062063226891 0.92549837 0.46659613 prediction 0.681381228414175 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153608670 chrX:153608673 nonsynonymous SNV 0.584 2 24 hm5C_associated_SNPs_50443 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608639-153608691
64251 chr1 146765320 146765320 1 + A C HNSC 146765316 + 146765296 146765336 41 CCTTGATTGTGGCTCAGCATCGTGATCGTTCCAATGTCCTG CCTTGATTGTGGCTCAGCATCGTGCTCGTTCCAATGTCCTG < 41bp 0.840678731932683 0.496258612177692 0.42871964 0.44170237 prediction 0.681357463865365 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146765316 chr1:146765320 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50444 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:146765289-146765333
64251 chr2 176957927 176957927 1 + A C LUSC 176957923 + 176957903 176957943 41 AGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAG AGCGGCGCGCCCGGAGGCTCCCCCCGCCAAAGAGTGCCCAG < 41bp 0.857868642903253 0.517213770573078 0.16808146 0.06340647 prediction 0.68130974466035 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176957923 chr2:176957927 synonymous SNV . 0 25 hm5C_associated_SNPs_50445 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176957920-176957940
64251 chrX 48649530 48649530 1 + G T UCEC 48649527 + 48649507 48649547 41 CAGAGGCTCCATGGAGTTCCCTGGCCTGGGGTCCCTGGGGA CAGAGGCTCCATGGAGTTCCCTGTCCTGGGGTCCCTGGGGA < 41bp 0.840635749479742 0.48822556351608 0.3704514 0.21697173 prediction 0.681271498959483 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48649527 chrX:48649530 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_50448 0 0 1 DDX3X POSTAR2 ENCODE chrX:48649497-48649565
64251 chr9 135862164 135862164 1 + G T LUSC 135862161 + 135862141 135862181 41 CTCTGGCCTCCTGCCCTTACCCCGGGTGAGTCAGAGCCCGG CTCTGGCCTCCTGCCCTTACCCCTGGTGAGTCAGAGCCCGG < 41bp 0.840629500074927 0.49781336579184 0.8890149 0.23929688 prediction 0.681259000149854 Functional Loss - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135862161 chr9:135862164 synonymous SNV . 0 24 hm5C_associated_SNPs_50449 0 0 1 SF3B4 POSTAR2 ENCODE chr9:135862161-135862214
64251 chr16 9197114 9197114 1 + A C LUAD 9197110 + 9197090 9197130 41 CCTTCCGGGAAGCCATAGCTCTGCATGGTAAAGCCGTTTAA CCTTCCGGGAAGCCATAGCTCTGCCTGGTAAAGCCGTTTAA < 41bp 0.877543107143844 0.536951246751298 0.13793266 0.16105539 prediction 0.681183720785092 Functional Loss - C16orf72 ENSG00000182831 CDS Human protein_coding chr16:9197110 chr16:9197114 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_50451 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:9196984-9197203
64251 chr12 56629383 56629383 1 + G T LGG 56629380 + 56629360 56629400 41 ACGCAGGACCTGGCGGACTACCAGAGAAGGACCTGGGCCCG ACGCAGGACCTGGCGGACTACCATAGAAGGACCTGGGCCCG < 41bp 0.854442577603738 0.513853366338104 0.87698054 0.60168946 prediction 0.681178422531268 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56629380 chr12:56629383 stopgain 0.908 0 24 hm5C_associated_SNPs_50452 0 0 5 BUD13 POSTAR2 ENCODE chr12:56629275-56629394
64251 chr14 24108557 24108557 1 + G T LUAD 24108554 + 24108534 24108574 41 AGGCTGAGGACCGGGAGCAGCTGGTGGCCAAGGTGAGGGGG AGGCTGAGGACCGGGAGCAGCTGTTGGCCAAGGTGAGGGGG < 41bp 0.844989311477767 0.504459628430377 0.66514695 0.34657386 prediction 0.681059366094779 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108554 chr14:24108557 nonsynonymous SNV 0.221 1 24 hm5C_associated_SNPs_50455 0 0 20 BUD13 POSTAR2 ENCODE chr14:24108502-24108590
64251 chr17 695133 695133 1 + A C KIRP 695129 + 695109 695149 41 ATTGGCGGGGAGACCTACGGCGTGAGCCTGGAGTCCCTGCA ATTGGCGGGGAGACCTACGGCGTGCGCCTGGAGTCCCTGCA < 41bp 0.840463854333739 0.488522201425694 0.27605325 0.13487473 prediction 0.680927708667478 Functional Loss - MRM3 ENSG00000171861 CDS Human protein_coding chr17:695129 chr17:695133 nonsynonymous SNV 0.925 4 25 hm5C_associated_SNPs_50461 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:695132-695159
64251 chr3 33907945 33907945 1 + A C rs3183987 33907941 + 33907921 33907961 41 TCACCAGAGTCCTGGACAGGCTCCATACCCGGGACCCCAGC TCACCAGAGTCCTGGACAGGCTCCCTACCCGGGACCCCAGC < 41bp 0.871045749437902 0.530582733937492 0.92399514 0.03699529 prediction 0.680926031000819 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33907941 chr3:33907945 synonymous SNV . 0 25 hm5C_associated_SNPs_50462 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:33907940-33907960
64251 chr16 135720 135720 1 + G T STAD 135717 + 135697 135737 41 AACCCCTCCGCTTCTATGTCCGGGGCAGCCCCTGGGTCAGT AACCCCTCCGCTTCTATGTCCGGTGCAGCCCCTGGGTCAGT < 41bp 0.85427716995558 0.513930013155546 0.9065386 0.43538085 prediction 0.680694313600068 Functional Loss - MPG ENSG00000103152 CDS Human protein_coding chr16:135717 chr16:135720 nonsynonymous SNV 0.827 4 24 hm5C_associated_SNPs_50470 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:135695-135748
64251 chr2 239003163 239003163 1 + G T LUAD 239003160 + 239003140 239003180 41 CCATCCGGGGACCCCGGCTTCAAGGTGATGGCCCCTCACCC CCATCCGGGGACCCCGGCTTCAATGTGATGGCCCCTCACCC < 41bp 0.840343483772556 0.474358214747563 0.89393044 0.37075114 prediction 0.680686967545112 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:239003160 chr2:239003163 nonsynonymous SNV 0.858 4 24 hm5C_associated_SNPs_50471 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:239003136-239003193
64251 chr12 68043612 68043612 1 + G T STAD 68043609 + 68043589 68043629 41 ACAGCGCCGTTCGTCAGCTTCAGGCTTCCCCGGGGCTCGGT ACAGCGCCGTTCGTCAGCTTCAGTCTTCCCCGGGGCTCGGT < 41bp 0.849205377282349 0.508867135474195 0.9149964 0.8813975 prediction 0.680676483616308 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68043609 chr12:68043612 nonsynonymous SNV 0.981 0 24 hm5C_associated_SNPs_50472 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:68043609-68043627
64251 chr19 804112 804112 1 + G T PRAD 804109 + 804089 804129 41 CCCTCTAGAGTGATCCACATCCGGAAGCTCCCCATCGACGT CCCTCTAGAGTGATCCACATCCGTAAGCTCCCCATCGACGT < 41bp 0.840271789201743 0.477684217040009 0.7989419 0.16691455 prediction 0.680543578403485 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804109 chr19:804112 synonymous SNV . 0 24 hm5C_associated_SNPs_50474 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:804037-804135
64251 chr19 58196753 58196753 1 + G T LUAD 58196750 + 58196730 58196770 41 ACTTTGCACATGTAACATCCCTGGGTAAGGCCCTAGCATCC ACTTTGCACATGTAACATCCCTGTGTAAGGCCCTAGCATCC < 41bp 0.840164878415691 0.497303899221936 0.71271485 0.10342321 prediction 0.680329756831382 Functional Loss - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58196750 chr19:58196753 nonsynonymous SNV 0.442 2 24 hm5C_associated_SNPs_50482 0 0 1 PRPF8 POSTAR2 ENCODE chr19:58196732-58196794
64251 chr11 119050707 119050707 1 + G T UCEC 119050704 + 119050684 119050724 41 CTGGAGAATGCCCAGGCCATCAAGAAGAAGCTGGGCAAGCT CTGGAGAATGCCCAGGCCATCAATAAGAAGCTGGGCAAGCT < 41bp 0.842001950678913 0.501879501839364 0.7418618 0.22931308 prediction 0.680244897679098 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050704 chr11:119050707 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50485 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:119050705-119050728
64251 chr19 36276202 36276202 1 + G T SARC 36276199 + 36276179 36276219 41 CCTCGAAAGAAGCCCCTGCCCTGGCTGGGGGGCACCCGTGC CCTCGAAAGAAGCCCCTGCCCTGTCTGGGGGGCACCCGTGC < 41bp 0.849164311469003 0.509064648656264 0.093280345 0.044353694 prediction 0.680199325625478 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36276199 chr19:36276202 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50487 0 0 3 EFTUD2 POSTAR2 ENCODE chr19:36276156-36276202
64251 chr16 2811883 2811883 1 + G T HNSC 2811880 + 2811860 2811900 41 CTCCAGCTCCAGGGTCCCACCGAGAGATTTCTTCTTCTCCC CTCCAGCTCCAGGGTCCCACCGATAGATTTCTTCTTCTCCC < 41bp 0.840076689948715 0.499111548462676 0.89324033 0.070652366 prediction 0.680153379897431 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811880 chr16:2811883 stopgain 0.995 1 24 hm5C_associated_SNPs_50490 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2811880-2811900
64251 chr1 246810640 246810640 1 + G T LUAD 246810637 + 246810617 246810657 41 GCGCTCCACACCCAGTCCTCCGAGACAGCAGGGAGCCCGTC GCGCTCCACACCCAGTCCTCCGATACAGCAGGGAGCCCGTC < 41bp 0.841122748565691 0.501048502717668 0.26064983 0.04354626 prediction 0.680148491696046 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810637 chr1:246810640 nonsynonymous SNV 0.176 0 24 hm5C_associated_SNPs_50491 0 0 2 FMR1 POSTAR2 ENCODE chr1:246810631-246810676
64251 chr10 98742990 98742990 1 + G T STAD 98742987 + 98742967 98743007 41 ACAAAGAAGTCAAGGAGTTACGAGGAGAGATTTTCCCCAGC ACAAAGAAGTCAAGGAGTTACGATGAGAGATTTTCCCCAGC < 41bp 0.844815487051765 0.504832878612571 0.88536716 0.16096762 prediction 0.679965216878387 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98742987 chr10:98742990 stopgain 0.012 0 24 hm5C_associated_SNPs_50497 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:98742970-98742991
64251 chr22 35785924 35785924 1 + G T UCEC 35785921 + 35785901 35785941 41 CCAGAGCCCCTCACGGGCACCAGGGCTTCGCCAGCGGGCCA CCAGAGCCCCTCACGGGCACCAGTGCTTCGCCAGCGGGCCA < 41bp 0.863955531974665 0.523976549985595 0.9006871 0.20583975 prediction 0.679957963978139 Functional Loss - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35785921 chr22:35785924 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_50498 0 0 1 RPS3 POSTAR2 ENCODE chr22:35785867-35785937
64251 chr3 193855566 193855566 1 + G T CESC 193855563 + 193855543 193855583 41 ACCCGCTTCCTGTCCACGTGCGAGGGCGTTAATACCGAGGT ACCCGCTTCCTGTCCACGTGCGATGGCGTTAATACCGAGGT < 41bp 0.839917624935893 0.490215049842212 0.9155406 0.16119331 prediction 0.679835249871786 Functional Loss - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855563 chr3:193855566 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_50499 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:193855538-193855567
64251 chr2 178977516 178977516 1 + G T LUAD 178977513 + 178977493 178977533 41 GCCCGCAGCTCACAGGCCTGCAGGGCCATGGAGGAGATGCA GCCCGCAGCTCACAGGCCTGCAGTGCCATGGAGGAGATGCA < 41bp 0.841082566729457 0.501173533754755 0.7225936 0.31416127 prediction 0.679818065949404 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977513 chr2:178977516 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_50501 0 0 1 GRWD1 POSTAR2 ENCODE chr2:178977376-178977552
64251 chr22 29446375 29446375 1 + G T LUAD 29446372 + 29446352 29446392 41 CTGGCAGCAGCACCTTGTTCCTGGGGCCCCACCTCTACGAG CTGGCAGCAGCACCTTGTTCCTGTGGCCCCACCTCTACGAG < 41bp 0.852766554211304 0.512862974457697 0.8918295 0.2523436 prediction 0.679807159507215 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446372 chr22:29446375 nonsynonymous SNV 0.182 4 24 hm5C_associated_SNPs_50502 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:29446360-29446380
64251 chr8 146278031 146278031 1 + G T HNSC 146278028 + 146278008 146278048 41 CCAGGCCCGGGTACTCCCTGCGCGTCCCGCGGAGCCCGGCT CCAGGCCCGGGTACTCCCTGCGCTTCCCGCGGAGCCCGGCT < 41bp 0.83990343663482 0.492002156636262 0.30733168 0.27268356 prediction 0.679806873269641 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278028 chr8:146278031 synonymous SNV . 0 24 hm5C_associated_SNPs_50503 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:146277980-146278040
64251 chrX 51640148 51640148 1 + G T ACC 51640145 + 51640125 51640165 41 GAACCCAGGTGCTGCACAGCCCCGAGATGTGGCCCTTCTTC GAACCCAGGTGCTGCACAGCCCCTAGATGTGGCCCTTCTTC < 41bp 0.850762387338375 0.51086509378364 0.29572108 0.16781518 prediction 0.67979458710947 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640145 chrX:51640148 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50505 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:51640125-51640176
64251 chr5 157178418 157178418 1 + G T UCEC 157178415 + 157178395 157178435 41 CAGTGCACGAAGGCAGCCCTCTGGGTGAACTCCATCGCTGT CAGTGCACGAAGGCAGCCCTCTGTGTGAACTCCATCGCTGT < 41bp 0.861853823467195 0.521994843963839 0.92002773 0.31052354 prediction 0.679717959006712 Functional Loss - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157178415 chr5:157178418 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50508 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:157178407-157178429
64251 chr7 141351333 141351333 1 + A C COAD 141351329 + 141351309 141351349 41 TTTCCTGTGCTCACAGAAGTCGAAAGGTGAGAAACCCCAAG TTTCCTGTGCTCACAGAAGTCGAACGGTGAGAAACCCCAAG < 41bp 0.839827780519763 0.483236596758131 0.3091503 0.21058488 prediction 0.679655561039525 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141351329 chr7:141351333 nonsynonymous SNV 0.863 2 25 hm5C_associated_SNPs_50511 0 0 2 BUD13 POSTAR2 ENCODE chr7:141351319-141351424
64251 chr14 50089073 50089073 1 + A C ESCA 50089069 + 50089049 50089089 41 GTATCTTGTCTTCCAAAATTCTGGAAAGTGCTGGTTCCTCA GTATCTTGTCTTCCAAAATTCTGGCAAGTGCTGGTTCCTCA < 41bp 0.852879730516885 0.51309889684491 0.0494605 0.05900207 prediction 0.67956166734395 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50089069 chr14:50089073 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_50516 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:50089000-50089080
64251 chr16 2580811 2580811 1 + A C BRCA 2580807 + 2580787 2580827 41 GGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCCCAGGAAA GGTTGATCTCAGCCCACAAGCCCCCGGGGCAGCCCAGGAAA < 41bp 0.839745431520355 0.483804088426157 0.18141189 0.13506281 prediction 0.67949086304071 Functional Loss - CEMP1 ENSG00000205923 CDS Human protein_coding chr16:2580807 chr16:2580811 synonymous SNV . 0 25 hm5C_associated_SNPs_50518 0 0 11 CSTF2T POSTAR2 ENCODE chr16:2580682-2580835
64251 chr13 21751095 21751095 1 + G T BLCA 21751092 + 21751072 21751112 41 TCCTCTGGCGCGGCCGCATTCCCGGCCGTCAGTGGATCGGG TCCTCTGGCGCGGCCGCATTCCCTGCCGTCAGTGGATCGGG < 41bp 0.847113753326285 0.507370277982197 0.6532745 0.29389298 prediction 0.679486950688177 Functional Loss - MRPL57 ENSG00000173141 CDS Human protein_coding chr13:21751092 chr13:21751095 nonsynonymous SNV 0.005 4 24 hm5C_associated_SNPs_50519 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:21751055-21751111
64251 chr17 27065227 27065227 1 + G T BRCA 27065224 + 27065204 27065244 41 AGTCGGGTGTGACCATCAAGCACGTGGCCTGTGGGGACTTC AGTCGGGTGTGACCATCAAGCACTTGGCCTGTGGGGACTTC < 41bp 0.839659354546216 0.483802813155563 0.40241912 0.13209435 prediction 0.679318709092432 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27065224 chr17:27065227 nonsynonymous SNV 0.944 3 24 hm5C_associated_SNPs_50524 0 0 1 PPIG POSTAR2 ENCODE chr17:27065210-27065260
64251 chr19 36728049 36728049 1 + G T LAML 36728046 + 36728026 36728066 41 TGTGCATGTGAGAAGCCATACAGGGGAGAAGCCCTATGGTT TGTGCATGTGAGAAGCCATACAGTGGAGAAGCCCTATGGTT < 41bp 0.851776187689833 0.512248058737074 0.49319458 0.10496715 prediction 0.679056257905518 Functional Loss - ZNF146 ENSG00000167635 CDS Human protein_coding chr19:36728046 chr19:36728049 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50534 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36726516-36728221
64251 chr19 39936605 39936605 1 + G T UCEC 39936602 + 39936582 39936622 41 AGCAGTGACGGCGAGGAGGCCGAGGTCTGTGGCTGGGGCGC AGCAGTGACGGCGAGGAGGCCGATGTCTGTGGCTGGGGCGC < 41bp 0.846123874101662 0.50666546905977 0.88650286 0.57087296 prediction 0.678916810083785 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39936602 chr19:39936605 nonsynonymous SNV 0.980 2 24 hm5C_associated_SNPs_50536 0 0 6 SRSF1 POSTAR2 ENCODE chr19:39936537-39936606
64251 chr12 69652407 69652407 1 + A C SARC 69652403 + 69652383 69652423 41 ACCACGTCCACCCTTAGGTCCTCCAGGCCCACCTGGTCCAC ACCACGTCCACCCTTAGGTCCTCCCGGCCCACCTGGTCCAC < 41bp 0.88534212791013 0.545970416992949 0.93932927 0.08803901 prediction 0.678743421834363 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652403 chr12:69652407 synonymous SNV . 0 25 hm5C_associated_SNPs_50538 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:69652357-69652410
64251 chr10 103919723 103919723 1 + G T UCEC 103919720 + 103919700 103919740 41 TCTCTGGGAACCCAGCCTCCCAAGAAGGCTGTGGAGAAGCA TCTCTGGGAACCCAGCCTCCCAATAAGGCTGTGGAGAAGCA < 41bp 0.839346134339005 0.489211049504718 0.24040458 0.13853616 prediction 0.67869226867801 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919720 chr10:103919723 nonsynonymous SNV 0.279 4 24 hm5C_associated_SNPs_50541 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919694-103919772
64251 chr19 1219381 1219381 1 + G T LUSC 1219378 + 1219358 1219398 41 AGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTCCCAGTG AGGAAATGCTGGACAGCGTGCCGTAGAAGCGTTTCCCAGTG < 41bp 0.839293831011722 0.493420144282957 0.8309299 0.51470864 prediction 0.678587662023444 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1219378 chr19:1219381 stopgain 0.914 1 24 hm5C_associated_SNPs_50545 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:1219324-1219394
64251 chr16 89985861 89985861 1 + G T READ 89985858 + 89985838 89985878 41 CTGGTGGTGGCCACCATCGCCAAGAACCGGAACCTGCACTC CTGGTGGTGGCCACCATCGCCAATAACCGGAACCTGCACTC < 41bp 0.839290730155077 0.490635876791396 0.90137255 0.58013755 prediction 0.678581460310155 Functional Loss - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89985858 chr16:89985861 nonsynonymous SNV 0.907 1 24 hm5C_associated_SNPs_50546 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:89985847-89985911
64251 chr9 140110248 140110248 1 + G T UCEC 140110245 + 140110225 140110265 41 CCATCCAGGAGCGTGTGGCCCAGGGCCAGACTGGTGAGCAC CCATCCAGGAGCGTGTGGCCCAGTGCCAGACTGGTGAGCAC < 41bp 0.855055243207559 0.515764875751463 0.8743175 0.5938278 prediction 0.678580734912191 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110245 chr9:140110248 nonsynonymous SNV 0.141 4 24 hm5C_associated_SNPs_50547 0 0 1 PPIG POSTAR2 ENCODE chr9:140110223-140110250
64251 chr17 45299793 45299793 1 + G T UCEC 45299790 + 45299770 45299810 41 TGGAGCAGCTGTTAGCTGGGCAAGAGGATGCCAATGGCTGC TGGAGCAGCTGTTAGCTGGGCAATAGGATGCCAATGGCTGC < 41bp 0.83920479836692 0.489095378169456 0.8452188 0.6517781 prediction 0.67840959673384 Functional Loss - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45299790 chr17:45299793 stopgain 0.985 1 24 hm5C_associated_SNPs_50553 0 0 5 DDX55 POSTAR2 ENCODE chr17:45299790-45299810
64251 chr1 156702150 156702150 1 + G T SARC 156702147 + 156702127 156702167 41 CCTGGCCTTTACCCGGATGCCTGGCTTTCAGACCCCCTCAG CCTGGCCTTTACCCGGATGCCTGTCTTTCAGACCCCCTCAG < 41bp 0.860140327811631 0.52097645631685 0.09925315 0.057150066 prediction 0.678327742989564 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702147 chr1:156702150 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_50554 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156702115-156702151
64251 chr16 69184518 69184518 1 + A C ESCA 69184514 + 69184494 69184534 41 CTGGTCCCTGTGACATCTAACAGCAGTGAGAAGCAGTGGGT CTGGTCCCTGTGACATCTAACAGCCGTGAGAAGCAGTGGGT < 41bp 0.839101762692873 0.46409685459319 0.85414207 0.78644794 prediction 0.678203525385746 Functional Loss - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184514 chr16:69184518 nonsynonymous SNV 0.879 0 25 hm5C_associated_SNPs_50557 0 0 10 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:69184487-69184519
64251 chr6 26156945 26156945 1 + G T BLCA 26156942 + 26156922 26156962 41 TCGGGTTCCTTCAAACTCAACAAGAAGGCGGCCTCTGGGGA TCGGGTTCCTTCAAACTCAACAATAAGGCGGCCTCTGGGGA < 41bp 0.844317090492649 0.50522538403401 0.29288 0.0957762 prediction 0.678183412917277 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156942 chr6:26156945 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_50558 0 0 32 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26156540-26156980
64251 chr1 110169497 110169497 1 + G T UCEC 110169494 + 110169474 110169514 41 GCTGAAAAGCCTCTGGAGACCCGGACCTATGAACAGGGCCC GCTGAAAAGCCTCTGGAGACCCGTACCTATGAACAGGGCCC < 41bp 0.843768556906992 0.504733138481509 0.5619595 0.19347787 prediction 0.678070836850967 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110169494 chr1:110169497 synonymous SNV . 0 24 hm5C_associated_SNPs_50560 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:110169465-110169497
64251 chr12 57892220 57892220 1 + A C BLCA 57892216 + 57892196 57892236 41 CTTGCAGGTACTCTCGCCTCCGCCAGTGGAACACCCTCTAT CTTGCAGGTACTCTCGCCTCCGCCCGTGGAACACCCTCTAT < 41bp 0.838986616062516 0.459670949167757 0.3383064 0.17082971 prediction 0.677973232125033 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57892216 chr12:57892220 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_50565 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:57892200-57892247
64251 chr11 64855517 64855517 1 + G T ACC 64855514 + 64855494 64855534 41 GCCCTCATGTCTCGCCTAGGCCGGGCCGCAGCTGACAGCGA GCCCTCATGTCTCGCCTAGGCCGTGCCGCAGCTGACAGCGA < 41bp 0.838890591314805 0.483758792500749 0.48538753 0.12725297 prediction 0.67778118262961 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855514 chr11:64855517 synonymous SNV . 0 24 hm5C_associated_SNPs_50569 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:64855480-64855526
64251 chr6 35434060 35434060 1 + G T UCEC 35434057 + 35434037 35434077 41 GGCTGGGCCTGGCTATGGCCCTAGAACCTAACACCACCTTC GGCTGGGCCTGGCTATGGCCCTATAACCTAACACCACCTTC < 41bp 0.838875546133906 0.496979715831733 0.15651101 0.2752192 prediction 0.677751092267811 Functional Loss - FANCE ENSG00000112039 CDS Human protein_coding chr6:35434057 chr6:35434060 stopgain 0.985 0 24 hm5C_associated_SNPs_50571 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:35434050-35434073
64251 chr17 40717938 40717938 1 + G T UCEC 40717935 + 40717915 40717955 41 TGTCTGAAGGTGGAGAAAGCCTGGGCCCTCTTGCAGAAGCG TGTCTGAAGGTGGAGAAAGCCTGTGCCCTCTTGCAGAAGCG < 41bp 0.838813101139153 0.484480454470631 0.3882305 0.07281041 prediction 0.677626202278306 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40717935 chr17:40717938 nonsynonymous SNV 0.960 4 24 hm5C_associated_SNPs_50573 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:40717924-40717947
64251 chr15 38591692 38591692 1 + G T LUSC 38591689 + 38591669 38591709 41 CTGTCTTCAAAGTCCCTCATCAGGAAGAGAATGGCTGTGCT CTGTCTTCAAAGTCCCTCATCAGTAAGAGAATGGCTGTGCT < 41bp 0.838790187236932 0.499600051402571 0.68880737 0.20054904 prediction 0.677580374473863 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591689 chr15:38591692 stopgain 1.000 1 24 hm5C_associated_SNPs_50575 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:38591691-38591692
64251 chr7 99956480 99956480 1 + G T UCEC 99956477 + 99956457 99956497 41 CCTGGAGACGGGGCCACTTCCACGGGCAGTCCTTCTACAGC CCTGGAGACGGGGCCACTTCCACTGGCAGTCCTTCTACAGC < 41bp 0.866658626116275 0.527982364877075 0.9069718 0.1858333 prediction 0.6773525224784 Functional Loss - PILRB ENSG00000121716 CDS Human protein_coding chr7:99956477 chr7:99956480 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_50583 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:99956451-99956481
64251 chr3 10885953 10885953 1 + G T LUAD 10885950 + 10885930 10885970 41 GAGCACATCGGGAACCTTCGCTGGGAGCTGGCCTTGTGTCT GAGCACATCGGGAACCTTCGCTGTGAGCTGGCCTTGTGTCT < 41bp 0.838655471887743 0.490654871587356 0.66268104 0.10963541 prediction 0.677310943775487 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10885950 chr3:10885953 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50585 0 0 1 SRSF1 POSTAR2 ENCODE chr3:10885943-10885989
64251 chr17 79941544 79941544 1 + G T rs147861765 79941541 + 79941521 79941561 41 AGCCGTGAGGGGCCTGAGAACATGGTGGGTCGTGCTCTGGG AGCCGTGAGGGGCCTGAGAACATTGTGGGTCGTGCTCTGGG < 41bp 0.838643894706766 0.483764353051407 0.8634184 0.43227127 prediction 0.677287789413532 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79941541 chr17:79941544 nonsynonymous SNV 0.684 0 24 hm5C_associated_SNPs_50586 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:79941513-79941546
64251 chr9 133760658 133760658 1 + G T LUAD 133760655 + 133760635 133760675 41 ATCAGCATCCTCGGCCCTGGCAGGGGACCAGCCGTCTTCCA ATCAGCATCCTCGGCCCTGGCAGTGGACCAGCCGTCTTCCA < 41bp 0.83858203598154 0.474628258074859 0.94913745 0.2837722 prediction 0.67716407196308 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760655 chr9:133760658 nonsynonymous SNV 0.954 0 24 hm5C_associated_SNPs_50587 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133760632-133760736
64251 chr14 93652974 93652974 1 + G T rs145078947 93652971 + 93652951 93652991 41 AATCGCCACCAGGCATTTGTCAAGGCTTCTAATCAGATCAG AATCGCCACCAGGCATTTGTCAATGCTTCTAATCAGATCAG < 41bp 0.841964033401116 0.503391559551168 0.87155104 0.19088998 prediction 0.677144947699895 Functional Loss - TMEM251 ENSG00000153485 CDS Human protein_coding chr14:93652971 chr14:93652974 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_50588 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93652953-93653007
64251 chr19 34887294 34887294 1 + G T STAD 34887291 + 34887271 34887311 41 CCCCATTGTGTGGGGGGAGCCAGGGACCAATGGCCAGCATG CCCCATTGTGTGGGGGGAGCCAGTGACCAATGGCCAGCATG < 41bp 0.862677685696555 0.524113108401064 0.91528964 0.15684831 prediction 0.677129154590983 Functional Loss - GPI ENSG00000105220;ENSG00000266953 CDS Human other chr19:34887291 chr19:34887294 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_50589 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:34887275-34887311
64251 chr12 53581371 53581371 1 + A C rs200684657 53581367 + 53581347 53581387 41 GACTTCCGACGGGCAGTTTTCTCTATAGGCGCAAGGGGCCC GACTTCCGACGGGCAGTTTTCTCTCTAGGCGCAAGGGGCCC < 41bp 0.838540397310071 0.46243368468609 0.9413142 0.16813761 prediction 0.677080794620143 Functional Loss - ZNF740 ENSG00000139651 CDS Human protein_coding chr12:53581367 chr12:53581371 synonymous SNV . 0 25 hm5C_associated_SNPs_50590 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:53581293-53581378
64251 chr1 6680096 6680096 1 + G T UCEC 6680093 + 6680073 6680113 41 AAGAAGAAGAAGAGGAAGCGCAGGGACAGTGATGCGCCTGG AAGAAGAAGAAGAGGAAGCGCAGTGACAGTGATGCGCCTGG < 41bp 0.838511446797746 0.479438124569381 0.8608685 0.43389452 prediction 0.677022893595493 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6680093 chr1:6680096 nonsynonymous SNV 0.926 2 24 hm5C_associated_SNPs_50591 0 0 9 BUD13 POSTAR2 ENCODE chr1:6680027-6680197
64251 chr9 131750444 131750444 1 + G T UCEC 131750441 + 131750421 131750461 41 CTTCTAATGTGGTGTCCCCCCTGGAACAGGCTCTCTCACAA CTTCTAATGTGGTGTCCCCCCTGTAACAGGCTCTCTCACAA < 41bp 0.841966610851081 0.503546503421148 0.2665592 0.04722914 prediction 0.676840214859865 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131750441 chr9:131750444 stopgain 1.000 1 24 hm5C_associated_SNPs_50597 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:131750434-131750458
64251 chr1 248059204 248059204 1 + G T LUAD 248059201 + 248059181 248059221 41 CCATCCAGCTCTTCCTGTTCCTGGGTCTGGGTGGTGTGGAG CCATCCAGCTCTTCCTGTTCCTGTGTCTGGGTGGTGTGGAG < 41bp 0.862973289762041 0.52465549646399 0.4240089 0.14891571 prediction 0.676635586596102 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059201 chr1:248059204 nonsynonymous SNV 0.914 1 24 hm5C_associated_SNPs_50602 0 0 1 RBM15 POSTAR2 ENCODE chr1:248059192-248059245
64251 chr1 45243363 45243363 1 + G T UCEC 45243360 + 45243340 45243380 41 AGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTG AGCTGGTTCGTACCAAGACCCTGTTGAAGAATTGCATCGTG < 41bp 0.838291553675017 0.491230626313663 0.055200428 0.01417771 prediction 0.676583107350034 Functional Loss - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243360 chr1:45243363 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_50603 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243283-45243456
64251 chr11 45949746 45949746 1 + A C rs11038714 45949742 + 45949722 45949762 41 GCACAGGTACCACGAGTGGCCCCGAGGCCACGCACCCACAG GCACAGGTACCACGAGTGGCCCCGCGGCCACGCACCCACAG < 41bp 0.85427157181369 0.516112469245362 0.088805765 0.13803336 prediction 0.676318205136657 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949742 chr11:45949746 synonymous SNV . 0 25 hm5C_associated_SNPs_50608 0 0 1 PRPF8 POSTAR2 ENCODE chr11:45949714-45949748
64251 chr12 56515472 56515472 1 + G T BLCA 56515469 + 56515449 56515489 41 CCCTGGCTCAAACAATTGCCCAGGGAATGGCACCTCCACCT CCCTGGCTCAAACAATTGCCCAGTGAATGGCACCTCCACCT < 41bp 0.838096413578921 0.478361502254111 0.9367209 0.7820034 prediction 0.676192827157842 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515469 chr12:56515472 stopgain 1.000 1 24 hm5C_associated_SNPs_50611 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:56515461-56515493
64251 chr15 41767772 41767772 1 + G T GBM 41767769 + 41767749 41767789 41 GTTTAGAGTTTGTCTCAAACCAAGAATTCACCGAAAGTGAG GTTTAGAGTTTGTCTCAAACCAATAATTCACCGAAAGTGAG < 41bp 0.840446678090504 0.502360946522507 0.14768961 0.11476654 prediction 0.676171463135994 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41767769 chr15:41767772 stopgain 1.000 1 24 hm5C_associated_SNPs_50612 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:41767765-41767789
64251 chr2 143643031 143643031 1 + A C SKCM 143643027 + 143643007 143643047 41 CAACGGATGAGAGGGTGGCTCTCCACCTAGATGAGGAAGAT CAACGGATGAGAGGGTGGCTCTCCCCCTAGATGAGGAAGAT < 41bp 0.838047395544882 0.447080610651735 0.89954984 0.13084579 prediction 0.676094791089763 Functional Loss - KYNU ENSG00000115919 CDS Human protein_coding chr2:143643027 chr2:143643031 nonsynonymous SNV 0.756 0 25 hm5C_associated_SNPs_50616 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:143642960-143643040
64251 chr17 18138814 18138814 1 + G T rs186995213 18138811 + 18138791 18138831 41 CCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAG CCATCACTGGGGGCCGAAACCTGTCCCAGGAGCCGTCACAG < 41bp 0.865770726425 0.52776399793091 0.913479 0.8408563 prediction 0.676013456988179 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18138811 chr17:18138814 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_50618 0 0 1 BUD13 POSTAR2 ENCODE chr17:18138773-18138824
64251 chr1 9613740 9613740 1 + G T COAD 9613737 + 9613717 9613757 41 TCCACTAGAAGTCATTAAGACACGGTTGCAGTCTTCAAGAT TCCACTAGAAGTCATTAAGACACTGTTGCAGTCTTCAAGAT < 41bp 0.845552834942005 0.507598358999532 0.21201879 0.085814774 prediction 0.675908951884945 Functional Loss - SLC25A33 ENSG00000171612 CDS Human protein_coding chr1:9613737 chr1:9613740 nonsynonymous SNV 0.753 5 24 hm5C_associated_SNPs_50620 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:9613720-9613740
64251 chr10 102676799 102676799 1 + G T LUSC 102676796 + 102676776 102676816 41 AGCTCCAGAAGCCTTAGCAGCAGGAGCAGCCTGTCCAGGCA AGCTCCAGAAGCCTTAGCAGCAGTAGCAGCCTGTCCAGGCA < 41bp 0.855023415213824 0.517105826392779 0.8438462 0.33685398 prediction 0.675835177642091 Functional Loss - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102676796 chr10:102676799 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_50622 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:102676796-102676818
64251 chr16 30594682 30594682 1 - C A LUSC 30594685 - 30594665 30594705 41 GTGGCGCATGAAGTGGCTGTCAAGGAGTGGTGGCCCAGCGT GTGGCGCATGAAGTGGCTGTCAATGAGTGGTGGCCCAGCGT < 41bp 0.837793587910699 0.476339305842701 0.9046137 0.24598062 prediction 0.675587175821399 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594685 chr16:30594682 nonsynonymous SNV 0.463 0 24 hm5C_associated_SNPs_50628 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30594681-30594707
64251 chr11 65047061 65047061 1 + G T UCEC 65047058 + 65047038 65047078 41 AGCGAACTCAAGGAACATTACAAGATTGAAGCTTTCACTCC AGCGAACTCAAGGAACATTACAATATTGAAGCTTTCACTCC < 41bp 0.851545112885315 0.51383219101613 0.58872944 0.12129471 prediction 0.67542584373837 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65047058 chr11:65047061 nonsynonymous SNV 0.970 0 24 hm5C_associated_SNPs_50637 0 0 5 BUD13 POSTAR2 ENCODE chr11:65047058-65047113
64251 chr1 43162873 43162873 1 + G T rs148020196 43162870 + 43162850 43162890 41 GGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAG GGGTGCTGACAACCAGGGTGCAGTAGAACAAGGTAGACCAG < 41bp 0.846492148034944 0.508787832440877 0.94133365 0.91659796 prediction 0.675408631188134 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162870 chr1:43162873 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50638 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:43162843-43162877
64251 chr6 126080418 126080418 1 + A C rs544589306 126080414 + 126080394 126080434 41 GTGTCTCATCTCAGCACTTGCGCCACCCAGCGGGAGGCGGC GTGTCTCATCTCAGCACTTGCGCCCCCCAGCGGGAGGCGGC < 41bp 0.86909903778234 0.531541011837788 0.20309451 0.12586588 prediction 0.675116051889106 Functional Loss - HEY2 ENSG00000135547 CDS Human protein_coding chr6:126080414 chr6:126080418 nonsynonymous SNV 0.962 1 25 hm5C_associated_SNPs_50642 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:126080415-126080487
64251 chr3 183906570 183906570 1 + A C LUSC 183906566 + 183906546 183906586 41 CAGGGCGGAGGGCTCTGAAGCTGCAGAGCTGGCAGAAATCT CAGGGCGGAGGGCTCTGAAGCTGCCGAGCTGGCAGAAATCT < 41bp 0.837518940773226 0.44668208198132 0.385359 0.2996084 prediction 0.675037881546452 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906566 chr3:183906570 synonymous SNV . 0 25 hm5C_associated_SNPs_50644 0 0 3 BUD13 POSTAR2 ENCODE chr3:183906534-183906572
64251 chrX 70523162 70523162 1 + A C UCEC 70523158 + 70523138 70523178 41 CGCTAAATATATCCCAAGCCCTGGAAATGGCATTGGAACAG CGCTAAATATATCCCAAGCCCTGGCAATGGCATTGGAACAG < 41bp 0.884528536855101 0.547085073397357 0.29481822 0.17878768 prediction 0.674886926915487 Functional Loss - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70523158 chrX:70523162 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_50645 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70523152-70523190
64251 chr19 1255487 1255487 1 + A C LUSC 1255483 + 1255463 1255503 41 GGCGTGACATCGGCACCATCCTGCAGATCCTGAACGACCTC GGCGTGACATCGGCACCATCCTGCCGATCCTGAACGACCTC < 41bp 0.881320530493888 0.543909314480967 0.2341322 0.22536063 prediction 0.674822432025841 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1255483 chr19:1255487 nonsynonymous SNV 0.941 2 25 hm5C_associated_SNPs_50647 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:1255434-1255522
64251 chr11 120097580 120097580 1 + A C KIRP 120097576 + 120097556 120097596 41 AGGTTCGGGGTCTGGAGCATCTGCACATGGATGTCGCTGTC AGGTTCGGGGTCTGGAGCATCTGCCCATGGATGTCGCTGTC < 41bp 0.883626077494194 0.546449366381115 0.5345366 0.30942762 prediction 0.674353422226159 Functional Loss - OAF ENSG00000184232 CDS Human protein_coding chr11:120097576 chr11:120097580 nonsynonymous SNV 0.930 0 25 hm5C_associated_SNPs_50657 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:120097551-120097593
64251 chr16 27367221 27367221 1 + A C PRAD 27367217 + 27367197 27367237 41 GTCTGCCTGTTGTGCTATGTCAGCATCACCAAGTGAGTCCT GTCTGCCTGTTGTGCTATGTCAGCCTCACCAAGTGAGTCCT < 41bp 0.877673901191554 0.540533444049672 0.13347024 0.43495572 prediction 0.674280914283762 Functional Loss - IL4R ENSG00000077238 CDS Human protein_coding chr16:27367217 chr16:27367221 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_50662 0 0 1 PPIG POSTAR2 ENCODE chr16:27367176-27367236
64251 chrX 37965974 37965974 1 + G T DLBC 37965971 + 37965951 37965991 41 GGTGGGCTGTACATTTTTGTCAAGAATTGCAGAAATCTGGC GGTGGGCTGTACATTTTTGTCAATAATTGCAGAAATCTGGC < 41bp 0.837118880564417 0.498497067155514 0.3573747 0.20878342 prediction 0.674237761128834 Functional Loss - SYTL5 ENSG00000147041 CDS Human protein_coding chrX:37965971 chrX:37965974 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50664 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chrX:37965959-37965979
64251 chr9 131670010 131670010 1 + G T UCEC 131670007 + 131669987 131670027 41 GACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGA GACCCCAAGCCGGCCTTCAGCAATATGAATGGGTCCATGGA < 41bp 0.86181761871758 0.524707983206411 0.49278152 0.17357677 prediction 0.674219271022337 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670007 chr9:131670010 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50665 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr9:131670008-131670029
64251 chr16 3338556 3338556 1 + G T PAAD 3338553 + 3338533 3338573 41 CTGCAAGGAGGGCCTGAGCCCCAGAGGCCCAGCTCCAGGTA CTGCAAGGAGGGCCTGAGCCCCATAGGCCCAGCTCCAGGTA < 41bp 0.856070671332233 0.518995542293269 0.837221 0.10945287 prediction 0.674150258077928 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3338553 chr16:3338556 nonsynonymous SNV 0.034 0 24 hm5C_associated_SNPs_50669 0 0 1 PPIG POSTAR2 ENCODE chr16:3338488-3338574
64251 chr17 34171798 34171798 1 + G T UCEC 34171795 + 34171775 34171815 41 GTGGAGGCTATGGTGGAGACCGAGGAGGCTATGGAGGAGAT GTGGAGGCTATGGTGGAGACCGATGAGGCTATGGAGGAGAT < 41bp 0.856860636577577 0.519795287892721 0.88637495 0.11115858 prediction 0.674130697369711 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171795 chr17:34171798 stopgain 0.983 0 24 hm5C_associated_SNPs_50673 0 0 35 RBPMS POSTAR2 SRX484627 chr17:34171640-34171900
64251 chr4 42400112 42400112 1 + G T rs11733156 42400109 + 42400089 42400129 41 GCGCTTTGCCTTCTCCTTGGCTGGCTGCGCTGGGGCCCGGC GCGCTTTGCCTTCTCCTTGGCTGTCTGCGCTGGGGCCCGGC < 41bp 0.842920328367894 0.505871366757389 0.43072978 0.2429404 prediction 0.674097923221011 Functional Loss - SHISA3 ENSG00000178343 CDS Human protein_coding chr4:42400109 chr4:42400112 nonsynonymous SNV 0.787 1 24 hm5C_associated_SNPs_50674 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr4:42400096-42400120
64251 chr19 14676021 14676021 1 + G T UCEC 14676018 + 14675998 14676038 41 CTGTCCTGCCTGCCAGGGTCCAAGACGCGGAAGATCCCATA CTGTCCTGCCTGCCAGGGTCCAATACGCGGAAGATCCCATA < 41bp 0.836949183846617 0.492065990096171 0.16882002 0.1122154 prediction 0.673898367693233 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14676018 chr19:14676021 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_50678 0 0 10 EFTUD2 POSTAR2 ENCODE chr19:14675950-14676036
64251 chr9 91930187 91930187 1 + G T BLCA 91930184 + 91930164 91930204 41 GGTGTCCAACAGAGTCTAGGCTGGGTTCATTACATGATTCA GGTGTCCAACAGAGTCTAGGCTGTGTTCATTACATGATTCA < 41bp 0.836946747091832 0.492973951870296 0.39216775 0.1302199 prediction 0.673893494183664 Functional Loss - CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930184 chr9:91930187 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50679 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:91930177-91930198
64251 chr11 20398150 20398150 1 + G T UCEC 20398147 + 20398127 20398167 41 AGGGATTTGTTCGTGTTGACCGAGATTATGTGCTGAAGTCT AGGGATTTGTTCGTGTTGACCGATATTATGTGCTGAAGTCT < 41bp 0.857921856727917 0.520982787647929 0.33392423 0.21173733 prediction 0.673878138159975 Functional Loss - HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20398147 chr11:20398150 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50682 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr11:20398130-20398164
64251 chr19 57795936 57795936 1 + G T UCEC 57795933 + 57795913 57795953 41 TTTCAGGAGTCTGTGACCTTCGAGGATGTGGCTGTGACATT TTTCAGGAGTCTGTGACCTTCGATGATGTGGCTGTGACATT < 41bp 0.836905116800243 0.491137819909499 0.8557915 0.09450278 prediction 0.673810233600486 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57795933 chr19:57795936 nonsynonymous SNV 0.746 0 24 hm5C_associated_SNPs_50683 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:57795916-57795988
64251 chr17 46023331 46023331 1 + G T STAD 46023328 + 46023308 46023348 41 ATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGA ATTGGGGCTGTGGTCAGCCACCATAGTTCTGTGATCCCTGA < 41bp 0.836884948756093 0.493213673868725 0.42962456 0.07077083 prediction 0.673769897512185 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46023328 chr17:46023331 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50685 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:46023318-46023341
64251 chr10 116020987 116020987 1 + G T UCEC 116020984 + 116020964 116021004 41 AGTTCAGTTCCACTCCTCATCTGGAATTCCCCTTGGATTCA AGTTCAGTTCCACTCCTCATCTGTAATTCCCCTTGGATTCA < 41bp 0.836843162508898 0.48399883554259 0.28625447 0.074527234 prediction 0.673686325017796 Functional Loss - VWA2 ENSG00000165816 CDS Human protein_coding chr10:116020984 chr10:116020987 stopgain 1.000 1 24 hm5C_associated_SNPs_50686 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:116020958-116020991
64251 chr20 43118110 43118110 1 + G T UCEC 43118107 + 43118087 43118127 41 CTGGGCCAGACGCTGCTGCCCGAGGGCCTGACCTCAGATGC CTGGGCCAGACGCTGCTGCCCGATGGCCTGACCTCAGATGC < 41bp 0.836820218831118 0.483640234829238 0.87328863 0.3714822 prediction 0.673640437662236 Functional Loss - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43118107 chr20:43118110 nonsynonymous SNV 0.987 0 24 hm5C_associated_SNPs_50687 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:43118101-43118123
64251 chrX 47107098 47107098 1 + G T LUAD 47107095 + 47107075 47107115 41 CCTGTCAATGAGAATCAGATCGAGGTGTGACTTCCATCCTA CCTGTCAATGAGAATCAGATCGATGTGTGACTTCCATCCTA < 41bp 0.857245160857155 0.520427575904736 0.92172915 0.19420046 prediction 0.673635169904838 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47107095 chrX:47107098 nonsynonymous SNV 0.970 1 24 hm5C_associated_SNPs_50688 0 0 1 PPIG POSTAR2 ENCODE chrX:47107066-47107099
64251 chr15 85431011 85431011 1 + G T UCEC 85431008 + 85430988 85431028 41 GGACATGGAGAACGACCCCTCGAGACGAAGAGAGTCCATCT GGACATGGAGAACGACCCCTCGATACGAAGAGAGTCCATCT < 41bp 0.85128069675203 0.514585505567937 0.88382125 0.33185542 prediction 0.673390382368185 Functional Loss - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85431008 chr15:85431011 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_50695 0 0 2 BUD13 POSTAR2 ENCODE chr15:85431001-85431061
64251 chr1 45479716 45479716 1 + G T SARC 45479713 + 45479693 45479733 41 CTGATGCTCTGGTCCCATATCTGGTAGGACAAGTGGTGGCT CTGATGCTCTGGTCCCATATCTGTTAGGACAAGTGGTGGCT < 41bp 0.836671285169848 0.487107429355463 0.40259132 0.09000558 prediction 0.673342570339696 Functional Loss - UROD ENSG00000126088 CDS Human protein_coding chr1:45479713 chr1:45479716 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_50696 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45479684-45479723
64251 chr18 60191545 60191545 1 + G T COAD 60191542 + 60191522 60191562 41 GCCGCGCTCCGCGGGGGCCCCGAGGACGCGGAGGTGGAGGT GCCGCGCTCCGCGGGGGCCCCGATGACGCGGAGGTGGAGGT < 41bp 0.840346789939632 0.503699896892557 0.91674 0.58128947 prediction 0.673293786094149 Functional Loss - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60191542 chr18:60191545 nonsynonymous SNV 0.890 0 24 hm5C_associated_SNPs_50698 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr18:60191538-60191561
64251 chr11 32615476 32615476 1 + G T HNSC 32615473 + 32615453 32615493 41 ACACAGAGGACAATGCTTCCCAGGCTCGAGTTGATGCCCAC ACACAGAGGACAATGCTTCCCAGTCTCGAGTTGATGCCCAC < 41bp 0.836539778485962 0.484432927958504 0.33288032 0.027731806 prediction 0.673079556971924 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32615473 chr11:32615476 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_50700 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:32615421-32615476
64251 chr15 40861663 40861663 1 + G T BLCA 40861660 + 40861640 40861680 41 TGGCAGAAACAGTGTCTACCCAGGTTGGGACAGAGGGCGGG TGGCAGAAACAGTGTCTACCCAGTTTGGGACAGAGGGCGGG < 41bp 0.83644089131298 0.483036356278506 0.7766229 0.22165093 prediction 0.67288178262596 Functional Loss - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40861660 chr15:40861663 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_50706 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:40861651-40861683
64251 chr17 48185988 48185988 1 + G T UCEC 48185985 + 48185965 48186005 41 ATCTCTCCCAGATGAGTGACCGAGGTGGGGGTGTTCCCTTG ATCTCTCCCAGATGAGTGACCGATGTGGGGGTGTTCCCTTG < 41bp 0.836418893851573 0.46803765887322 0.9256644 0.6105081 prediction 0.672837787703146 Functional Loss - PDK2 ENSG00000005882 CDS Human protein_coding chr17:48185985 chr17:48185988 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50709 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48185976-48186087
64251 chrX 65476001 65476001 1 + G T STAD 65475998 + 65475978 65476018 41 CTATCTGCCAAAAGGGCATCCTGGAGCCCCATGGAGGACGG CTATCTGCCAAAAGGGCATCCTGTAGCCCCATGGAGGACGG < 41bp 0.854886182354996 0.518549201093985 0.37380502 0.11067003 prediction 0.672673962522023 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65475998 chrX:65476001 stopgain 0.816 0 24 hm5C_associated_SNPs_50713 0 0 1 FMR1 POSTAR2 ENCODE chrX:65475951-65476008
64251 chr9 99220679 99220679 1 + G T UCEC 99220676 + 99220656 99220696 41 GGTAGGCCAGAAGCGGACTCCTAGAAGAGGGGAGCAGCAAG GGTAGGCCAGAAGCGGACTCCTATAAGAGGGGAGCAGCAAG < 41bp 0.853904159660917 0.517625511359729 0.4277261 0.8819549 prediction 0.672557296602375 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99220676 chr9:99220679 nonsynonymous SNV 0.937 2 24 hm5C_associated_SNPs_50715 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:99220663-99220694
64251 chr1 161130660 161130660 1 + G T LUAD 161130657 + 161130637 161130677 41 ACGGGGACGGACCTCAGGCCCTCGTCCCAGAGGCCCCCTTC ACGGGGACGGACCTCAGGCCCTCTTCCCAGAGGCCCCCTTC < 41bp 0.836213142059205 0.474195293808317 0.1890626 0.1113984 prediction 0.672426284118409 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130657 chr1:161130660 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_50717 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:161130660-161130680
64251 chr4 69978308 69978308 1 + G T LUSC 69978305 + 69978285 69978325 41 AACACCTTCGGGTTGCAGCCCACGACCTCACCTGGTTCCAG AACACCTTCGGGTTGCAGCCCACTACCTCACCTGGTTCCAG < 41bp 0.841710507106384 0.505540545166775 0.023151934 0.010321945 prediction 0.672339923879218 Functional Loss - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69978305 chr4:69978308 nonsynonymous SNV 0.293 3 24 hm5C_associated_SNPs_50719 0 0 2 SND1 POSTAR2 ENCODE chr4:69978262-69978312
64251 chr3 49212328 49212328 1 + A C COAD 49212324 + 49212304 49212344 41 TCTTTAGCCTGGGTGGCCTGCAGCAGCCTGGGCCCCACAAC TCTTTAGCCTGGGTGGCCTGCAGCCGCCTGGGCCCCACAAC < 41bp 0.873568787553392 0.537419876271069 0.68169016 0.36888784 prediction 0.672297822564646 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212324 chr3:49212328 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_50721 0 0 2 METAP2 POSTAR2 ENCODE chr3:49212301-49212333
64251 chr19 50917049 50917049 1 + G T UCEC 50917046 + 50917026 50917066 41 ATGTGCCGATTCGGCGTGTCCTCGGTGGCTGAGGCGATGGC ATGTGCCGATTCGGCGTGTCCTCTGTGGCTGAGGCGATGGC < 41bp 0.857269992001771 0.52112533591578 0.12626705 0.03715691 prediction 0.672289312171981 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50917046 chr19:50917049 synonymous SNV . 0 24 hm5C_associated_SNPs_50722 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50917000-50917060
64251 chr3 183888414 183888414 1 + G T LUAD 183888411 + 183888391 183888431 41 CTGATGATGCCCCCGCCGCCCGCGGCCATGGGGCCCCCAGG CTGATGATGCCCCCGCCGCCCGCTGCCATGGGGCCCCCAGG < 41bp 0.846105405616677 0.510037854262049 0.38967294 0.1191065 prediction 0.672135102709255 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183888411 chr3:183888414 synonymous SNV . 0 24 hm5C_associated_SNPs_50726 0 0 2 EIF3H POSTAR2 ENCODE chr3:183888384-183888423
64251 chr11 124496881 124496881 1 + A C STAD 124496877 + 124496857 124496897 41 TGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCA TGCAGTACTCGAATATATGCCAGCCTGAAGTGCCCAGACCA < 41bp 0.836034763426682 0.455680853957471 0.14471576 0.14370143 prediction 0.672069526853364 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124496877 chr11:124496881 nonsynonymous SNV 0.993 1 25 hm5C_associated_SNPs_50728 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:124496867-124496893
64251 chr7 107234462 107234462 1 + A C STAD 107234458 + 107234438 107234478 41 ACCATTGAGAAGAGCTCCACCAGCAGACCTGATGCCTATGA ACCATTGAGAAGAGCTCCACCAGCCGACCTGATGCCTATGA < 41bp 0.835907935776104 0.458893635832788 0.15058851 0.047798425 prediction 0.671815871552207 Functional Loss - BCAP29 ENSG00000075790 CDS Human protein_coding chr7:107234458 chr7:107234462 synonymous SNV . 0 25 hm5C_associated_SNPs_50735 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:107234435-107234474
64251 chr3 42727434 42727434 1 + A C rs35033264 42727430 + 42727410 42727450 41 CGTGCAGGATTTGTTCGCCGCGGCACACCGCTTCCAGATCC CGTGCAGGATTTGTTCGCCGCGGCCCACCGCTTCCAGATCC < 41bp 0.856666619901673 0.520772741511246 0.23980635 0.14489436 prediction 0.671787756780854 Functional Loss - KLHL40 ENSG00000157119 CDS Human protein_coding chr3:42727430 chr3:42727434 synonymous SNV . 0 25 hm5C_associated_SNPs_50736 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:42727418-42727435
64251 chr5 140476411 140476411 1 + A C COAD 140476407 + 140476387 140476427 41 CTACCTGCTGCTCCCGGAGGCGGCACCGGCCCAGGCCCAGG CTACCTGCTGCTCCCGGAGGCGGCCCCGGCCCAGGCCCAGG < 41bp 0.843870100917784 0.508026828888606 0.76424444 0.7705164 prediction 0.671686544058356 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476407 chr5:140476411 synonymous SNV . 0 25 hm5C_associated_SNPs_50740 0 0 1 SND1 POSTAR2 ENCODE chr5:140476365-140476432
64251 chr17 42636154 42636154 1 + G T STAD 42636151 + 42636131 42636171 41 AAGTGGGGCCACGAGGCCATCGAGGCCAACTCTCAGTACTT AAGTGGGGCCACGAGGCCATCGATGCCAACTCTCAGTACTT < 41bp 0.83581067439113 0.488600148834477 0.91968316 0.3541171 prediction 0.67162134878226 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636151 chr17:42636154 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_50742 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42636119-42636165
64251 chr2 190531388 190531388 1 + G T UCEC 190531385 + 190531365 190531405 41 GTGGCAAGAAGTTCCAGCATCTGGACTTTTCAGAATTGATC GTGGCAAGAAGTTCCAGCATCTGTACTTTTCAGAATTGATC < 41bp 0.838328649083938 0.502528169682605 0.13533792 0.06539756 prediction 0.671600958802666 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531385 chr2:190531388 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_50743 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:190531331-190531388
64251 chr14 52188726 52188726 1 + G T LUAD 52188723 + 52188703 52188743 41 AGCAGATGAATGAAGAGTCTCTGGAAGTCAGCCCAGACATG AGCAGATGAATGAAGAGTCTCTGTAAGTCAGCCCAGACATG < 41bp 0.843729426361762 0.507967670349346 0.30785885 0.12155312 prediction 0.671523512024831 Functional Loss - FRMD6 ENSG00000139926 CDS Human protein_coding chr14:52188723 chr14:52188726 stopgain 0.922 1 24 hm5C_associated_SNPs_50747 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:52188693-52188731
64251 chr12 53646934 53646934 1 + G T UCEC 53646931 + 53646911 53646951 41 CTTGTGGATTGGCTGGGTCGCAAGAATTCTTGTGTCCTCTT CTTGTGGATTGGCTGGGTCGCAATAATTCTTGTGTCCTCTT < 41bp 0.83573730691648 0.486411059765584 0.7185968 0.30344552 prediction 0.67147461383296 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53646931 chr12:53646934 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_50748 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:53646934-53646973
64251 chr1 210012334 210012334 1 + G T UCEC 210012331 + 210012311 210012351 41 AGCCTCCTCGAGGGTGACAGCAAGAAGAAAATCATTGTGAG AGCCTCCTCGAGGGTGACAGCAATAAGAAAATCATTGTGAG < 41bp 0.83569416726421 0.490432210103746 0.89977056 0.38906282 prediction 0.671388334528421 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012331 chr1:210012334 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_50752 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:210012308-210012337
64251 chr19 58806101 58806101 1 + A C rs570466227 58806097 + 58806077 58806117 41 CCAGCATGAGCGCATCCACACTGGAGACAAGCCCTACAAGT CCAGCATGAGCGCATCCACACTGGCGACAAGCCCTACAAGT < 41bp 0.835660517597664 0.468849772993264 0.12576395 0.17404151 prediction 0.671321035195327 Functional Loss - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58806097 chr19:58806101 synonymous SNV . 0 25 hm5C_associated_SNPs_50756 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:58806088-58806116
64251 chr14 103805095 103805095 1 + G T SARC 103805092 + 103805072 103805112 41 GAAGAAGAGGAGGATGATGACTGGGGAGAAGATACAACTGA GAAGAAGAGGAGGATGATGACTGTGGAGAAGATACAACTGA < 41bp 0.845349719976301 0.509707172479226 0.49817383 0.37431794 prediction 0.671285094994151 Functional Loss - EIF5 ENSG00000100664 CDS Human protein_coding chr14:103805092 chr14:103805095 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_50759 0 0 34 NOP58 POSTAR2 GSE43666,GSM1067861 chr14:103805060-103805100
64251 chr1 150131499 150131499 1 + G T COAD 150131496 + 150131476 150131516 41 GGAGATGGGAAGCGAAAGGCCAAGGACCCCCCTCGGTCTCC GGAGATGGGAAGCGAAAGGCCAATGACCCCCCTCGGTCTCC < 41bp 0.835632563279847 0.461697287776155 0.46596742 0.046605676 prediction 0.671265126559694 Functional Loss - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131496 chr1:150131499 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_50760 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131464-150131517
64251 chr8 11606502 11606502 1 + G T LUAD 11606499 + 11606479 11606519 41 TGTCCACCCCGCTCTGGAGGCGAGATGGGACGGGTCACTAT TGTCCACCCCGCTCTGGAGGCGATATGGGACGGGTCACTAT < 41bp 0.835592933996924 0.483189731159438 0.9162539 0.831288 prediction 0.671185867993848 Functional Loss - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11606499 chr8:11606502 nonsynonymous SNV 0.900 5 24 hm5C_associated_SNPs_50761 0 0 1 DDX6 POSTAR2 ENCODE chr8:11606451-11606504
64251 chrX 51639931 51639931 1 + G T LUSC 51639928 + 51639908 51639948 41 GGCAGACCCCACCGGGCTGGCAGGGTCCTCCAGACTGGCAA GGCAGACCCCACCGGGCTGGCAGTGTCCTCCAGACTGGCAA < 41bp 0.835591077772717 0.482375477167282 0.8761766 0.0776349 prediction 0.671182155545434 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51639928 chrX:51639931 nonsynonymous SNV 0.925 2 24 hm5C_associated_SNPs_50762 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:51639912-51639940
64251 chr3 183882370 183882370 1 + G T LUSC 183882367 + 183882347 183882387 41 GCCCAGCGAGAGCGGCCACGCCGGAGGGATGGCCCAGAGCA GCCCAGCGAGAGCGGCCACGCCGTAGGGATGGCCCAGAGCA < 41bp 0.83555690139343 0.478221370452191 0.6379616 0.11868635 prediction 0.671113802786859 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882367 chr3:183882370 synonymous SNV . 0 24 hm5C_associated_SNPs_50764 0 0 2 PPIG POSTAR2 ENCODE chr3:183882343-183882384
64251 chr3 17053602 17053602 1 + A C UCEC 17053598 + 17053578 17053618 41 AAAACCGTGGATGAGGTATTCAAGAATGCCCAGCCCCCTAT AAAACCGTGGATGAGGTATTCAAGCATGCCCAGCCCCCTAT < 41bp 0.835493743023977 0.481489672256212 0.8204868 0.5061202 prediction 0.670987486047953 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17053598 chr3:17053602 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_50769 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:17053600-17053620
64251 chr11 13716346 13716346 1 + A C READ 13716342 + 13716322 13716362 41 ATCCCAGAATACTATGAAGGCAAGAACGTCCTCCTCACAGG ATCCCAGAATACTATGAAGGCAAGCACGTCCTCCTCACAGG < 41bp 0.835484357985237 0.484634938470828 0.19295785 0.13537964 prediction 0.670968715970473 Functional Loss - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13716342 chr11:13716346 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_50771 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:13716315-13716365
64251 chr12 56514687 56514687 1 + G T LUAD 56514684 + 56514664 56514704 41 GAAGACAGGAGAGCTTCCCCCACGGCTGAGGCAGAAAGTAG GAAGACAGGAGAGCTTCCCCCACTGCTGAGGCAGAAAGTAG < 41bp 0.835406421477756 0.483522011373507 0.41082907 0.1253865 prediction 0.670812842955513 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56514684 chr12:56514687 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_50777 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:56514676-56514697
64251 chr19 7671380 7671380 1 + G T CESC 7671377 + 7671357 7671397 41 TCCAGACCGTCCGGCGGCTGCAGGAGAAGACCGAGCAGGAA TCCAGACCGTCCGGCGGCTGCAGTAGAAGACCGAGCAGGAA < 41bp 0.835262684771292 0.492245633939416 0.92726 0.88924646 prediction 0.670525369542584 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7671377 chr19:7671380 stopgain 0.997 0 24 hm5C_associated_SNPs_50784 0 0 2 BUD13 POSTAR2 ENCODE chr19:7671328-7671382
64251 chr10 134464009 134464009 1 + G T HNSC 134464006 + 134463986 134464026 41 TACAAATCCCAGGAGCACTTCACGGTGAGTCCCTCCCGCTG TACAAATCCCAGGAGCACTTCACTGTGAGTCCCTCCCGCTG < 41bp 0.835171456116966 0.47771002762997 0.8939591 0.3220189 prediction 0.670342912233931 Functional Loss - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134464006 chr10:134464009 synonymous SNV . 0 24 hm5C_associated_SNPs_50788 0 0 1 PRPF8 POSTAR2 ENCODE chr10:134463988-134464049
64251 chr1 244538733 244538733 1 + G T UCEC 244538730 + 244538710 244538750 41 CTATTACCCTGGGCAGCTGGCAAGACTCCATTTTGATCATA CTATTACCCTGGGCAGCTGGCAATACTCCATTTTGATCATA < 41bp 0.851632314403619 0.516523170118856 0.10156378 0.02998209 prediction 0.670218288569526 Functional Loss - C1orf100 ENSG00000173728 CDS Human protein_coding chr1:244538730 chr1:244538733 nonsynonymous SNV 0.939 4 24 hm5C_associated_SNPs_50789 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:244538709-244538744
64251 chr10 73082652 73082652 1 + G T LUSC 73082649 + 73082629 73082669 41 CCCCCTGGCCTGCAGAGGCCCGAGGACCGCTTCTGTGGCAC CCCCCTGGCCTGCAGAGGCCCGATGACCGCTTCTGTGGCAC < 41bp 0.835059735179814 0.464038377302334 0.5580129 0.06508583 prediction 0.670119470359627 Functional Loss - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73082649 chr10:73082652 nonsynonymous SNV 0.895 0 24 hm5C_associated_SNPs_50793 0 0 1 TBRG4 POSTAR2 ENCODE chr10:73082636-73082669
64251 chr12 58109591 58109591 1 + G T LUAD 58109588 + 58109568 58109608 41 TCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCC TCTCTGGGGACTACATCGATCGCTTGGACGAGCCCTTGTCC < 41bp 0.851590321068124 0.516603822011492 0.566393 0.11195922 prediction 0.669972998113264 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58109588 chr12:58109591 nonsynonymous SNV 0.577 3 24 hm5C_associated_SNPs_50798 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr6 27833380 27833380 1 + A C rs190008233 27833376 + 27833356 27833396 41 AGAAGACCCGCATTATCCCGCGCCACTTGCAGCTGGCCATC AGAAGACCCGCATTATCCCGCGCCCCTTGCAGCTGGCCATC < 41bp 0.85949971833305 0.524521475720876 0.13710529 0.09460381 prediction 0.669956485224347 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833376 chr6:27833380 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_50799 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27833360-27833400
64251 chr19 44740634 44740634 1 + G T LUAD 44740631 + 44740611 44740651 41 ATACCATCAGAGAGGCCACACTGGAGAAAAACCTTACAAAT ATACCATCAGAGAGGCCACACTGTAGAAAAACCTTACAAAT < 41bp 0.835879658991447 0.500911688840366 0.12613103 0.0291996 prediction 0.669935940302163 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44740631 chr19:44740634 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_50800 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:44740605-44740641
64251 chr17 62080248 62080248 1 - C A rs141394372 62080251 - 62080231 62080271 41 AGCCAGATGGTCATCATAGTCACGGTGGTGTCGGTGTTGCT AGCCAGATGGTCATCATAGTCACTGTGGTGTCGGTGTTGCT < 41bp 0.855415409196076 0.520541796895267 0.90966636 0.5044398 prediction 0.669747224601619 Functional Loss - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62080251 chr17:62080248 synonymous SNV . 0 24 hm5C_associated_SNPs_50805 0 0 1 YBX3 POSTAR2 ENCODE chr17:62080205-62080269
64251 chr11 608731 608731 1 + G T HNSC 608728 + 608708 608748 41 CAGCCGGAGGACGTCCCGGTCGCGGTCGGGGAGCCCTGGCA CAGCCGGAGGACGTCCCGGTCGCTGTCGGGGAGCCCTGGCA < 41bp 0.860491435996621 0.525634153280271 0.8915938 0.13527033 prediction 0.6697145654327 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608728 chr11:608731 nonsynonymous SNV 0.014 2 24 hm5C_associated_SNPs_50807 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:608720-608745
64251 chr5 33467732 33467732 1 + G T LUAD 33467729 + 33467709 33467749 41 ACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGA ACAAGAGACAATAAGGTCCACGGTGAACGCACCATTTCTGA < 41bp 0.847264101002476 0.512410255394836 0.45391285 0.076075256 prediction 0.66970769121528 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33467729 chr5:33467732 synonymous SNV . 0 24 hm5C_associated_SNPs_50808 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33467660-33467756
64251 chr6 44116019 44116019 1 + G T LUAD 44116016 + 44115996 44116036 41 CCATTGAGTACTACACAAAGCTGGAGCAGAAGCTGAAGGAA CCATTGAGTACTACACAAAGCTGTAGCAGAAGCTGAAGGAA < 41bp 0.83478512794133 0.481298322616799 0.17159286 0.098430365 prediction 0.66957025588266 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116016 chr6:44116019 stopgain 1.000 1 24 hm5C_associated_SNPs_50815 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:44115987-44116025
64251 chr11 118960758 118960758 1 + G T UCEC 118960755 + 118960735 118960775 41 CAAAATTTGTTGGGAAGACCCTAGAAACCCTGCCAGAGAAG CAAAATTTGTTGGGAAGACCCTATAAACCCTGCCAGAGAAG < 41bp 0.85200056657635 0.517218354834584 0.34894615 0.49109805 prediction 0.669564423483533 Functional Loss - HMBS ENSG00000256269 CDS Human protein_coding chr11:118960755 chr11:118960758 stopgain 0.999 0 24 hm5C_associated_SNPs_50816 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:118960740-118960772
64251 chr20 18296758 18296758 1 + G T UCS 18296755 + 18296735 18296775 41 GTGTGTGGGCACAGCTTCAGCCAGAATTCAACCCTCATCTC GTGTGTGGGCACAGCTTCAGCCATAATTCAACCCTCATCTC < 41bp 0.834742235396847 0.479016391287193 0.26957378 0.13026741 prediction 0.669484470793695 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296755 chr20:18296758 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_50823 0 0 3 EWSR1 POSTAR2 SRX029343 chr20:18296758-18296780
64251 chr6 26200013 26200013 1 + G T LAML 26200010 + 26199990 26200030 41 CGATATCTTCGAGCGCATCGCTGGCGAGGCTTCCCGCCTGG CGATATCTTCGAGCGCATCGCTGTCGAGGCTTCCCGCCTGG < 41bp 0.848259664293344 0.513638707817355 0.44167152 0.07560837 prediction 0.669241912951979 Functional Loss - HIST1H2BF ENSG00000197846 CDS Human other chr6:26200010 chr6:26200013 nonsynonymous SNV 0.015 2 24 hm5C_associated_SNPs_50825 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26199991-26200017
64251 chr16 89289664 89289664 1 + G T UCEC 89289661 + 89289641 89289681 41 ACCTCTACAGAGATGTGATGCTGGAAAACTACGAGAACCTG ACCTCTACAGAGATGTGATGCTGTAAAACTACGAGAACCTG < 41bp 0.840018421163661 0.505445988967353 0.53585076 0.380145 prediction 0.669144864392618 Functional Loss - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89289661 chr16:89289664 stopgain 0.262 0 24 hm5C_associated_SNPs_50829 0 0 1 PPIG POSTAR2 ENCODE chr16:89289588-89289708
64251 chr12 54379778 54379778 1 + G T LUAD 54379775 + 54379755 54379795 41 GCCGACTCCAGCCCAGACACCTCGGATAACGAAGCGAAAGG GCCGACTCCAGCCCAGACACCTCTGATAACGAAGCGAAAGG < 41bp 0.834529246255741 0.491912612733521 0.3420972 0.091510534 prediction 0.669058492511481 Functional Loss - HOXC10 ENSG00000180818;ENSG00000273049 CDS Human other chr12:54379775 chr12:54379778 synonymous SNV . 0 24 hm5C_associated_SNPs_50830 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:54379760-54379780
64251 chr5 74655898 74655898 1 + G T LUAD 74655895 + 74655875 74655915 41 TGTGTGTGGGACCGTAATGGCTGGGGAATTGTCACTTATGG TGTGTGTGGGACCGTAATGGCTGTGGAATTGTCACTTATGG < 41bp 0.852084560299738 0.517557248260079 0.34742588 0.059886575 prediction 0.669054624079317 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74655895 chr5:74655898 nonsynonymous SNV 0.954 4 24 hm5C_associated_SNPs_50831 0 0 13 LIN28A POSTAR2 GSE39873,GSM980593 chr5:74655880-74655900
64251 chrX 70764444 70764444 1 + G T THCA 70764441 + 70764421 70764461 41 TGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCC TGTACTGTGTTCGCAGTGACCTGTGGAACCTGCTCAAAGCC < 41bp 0.851397920085751 0.516923331592832 0.85745406 0.18432203 prediction 0.668949176985838 Functional Loss - OGT ENSG00000147162 CDS Human protein_coding chrX:70764441 chrX:70764444 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50836 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70764438-70764452
64251 chr12 66717817 66717817 1 + G T BRCA 66717814 + 66717794 66717834 41 GGTGATAAAATTTGTTGTACCAGGAATGCATACCTCTCAGA GGTGATAAAATTTGTTGTACCAGTAATGCATACCTCTCAGA < 41bp 0.845033498739883 0.510590826319805 0.7744176 0.09256759 prediction 0.668885344840155 Functional Loss - HELB ENSG00000127311 CDS Human protein_coding chr12:66717814 chr12:66717817 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_50837 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:66717797-66717821
64251 chr13 53191674 53191674 1 + A C rs9526957 53191670 + 53191650 53191690 41 CGCACTGTTCAGTTGCTCTCCTGGATGGCTTTATGTCTCCG CGCACTGTTCAGTTGCTCTCCTGGCTGGCTTTATGTCTCCG < 41bp 0.834415213438978 0.48488463978459 0.53239584 0.4667854 prediction 0.668830426877956 Functional Loss - HNRNPA1L2 ENSG00000139675 UTR5 Human protein_coding chr13:53191670 chr13:53191674 . . 0 25 hm5C_associated_SNPs_50839 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:53191659-53191714
64251 chr7 141443384 141443384 1 + G T LUAD 141443381 + 141443361 141443401 41 CCCTGAATCGTGTGCACTTACTTGGGCGAGTGGGTCAGGAC CCCTGAATCGTGTGCACTTACTTTGGCGAGTGGGTCAGGAC < 41bp 0.851756348597408 0.517362198926499 0.36284816 0.22507223 prediction 0.668788299341818 Functional Loss - SSBP1 ENSG00000106028 CDS Human protein_coding chr7:141443381 chr7:141443384 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50841 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:141443358-141443395
64251 chr7 139086964 139086964 1 + G T UCEC 139086961 + 139086941 139086981 41 AGAAAAGATTAGCAGAAACTCAAGAAGAGATTAGTGCTGAA AGAAAAGATTAGCAGAAACTCAATAAGAGATTAGTGCTGAA < 41bp 0.834377342082272 0.499739465971489 0.53964555 0.18577299 prediction 0.668754684164544 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139086961 chr7:139086964 stopgain 1.000 1 24 hm5C_associated_SNPs_50844 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:139086867-139086965
64251 chr3 49052332 49052332 1 + G T SKCM 49052329 + 49052309 49052349 41 GCCTGCACACCTTGCCCACCCGTGAGGGCCACCATCTCGTG GCCTGCACACCTTGCCCACCCGTTAGGGCCACCATCTCGTG < 41bp 0.834370844090254 0.487439878894969 0.11836326 0.07192165 prediction 0.668741688180508 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49052329 chr3:49052332 stopgain 0.779 0 24 hm5C_associated_SNPs_50845 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49052330-49052362
64251 chr1 161480649 161480649 1 + A C rs11810143 161480645 + 161480625 161480665 41 GCCCAGCATGGGCAGCTCTTCACCAATGGGGATCATTGTGG GCCCAGCATGGGCAGCTCTTCACCCATGGGGATCATTGTGG < 41bp 0.834365974504278 0.452438460773078 0.09460801 0.06496176 prediction 0.668731949008556 Functional Loss - FCGR2A ENSG00000143226 CDS Human protein_coding chr1:161480645 chr1:161480649 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_50846 0 0 5 EFTUD2 POSTAR2 ENCODE chr1:161480568-161480662
64251 chr6 111498515 111498515 1 + A C UCEC 111498511 + 111498491 111498531 41 GTCATTTTGGGACACTATTTCAAGAAGCGCCTTGGACTGGT GTCATTTTGGGACACTATTTCAAGCAGCGCCTTGGACTGGT < 41bp 0.877043113228692 0.542784624915695 0.9049112 0.61025065 prediction 0.668516976625993 Functional Loss - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111498511 chr6:111498515 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_50852 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:111498480-111498520
64251 chr21 48068521 48068521 1 + G T LUSC 48068518 + 48068498 48068538 41 TCTCTTCTGTGCACACTATGCGCGGCCTAGAGCGGTGAGTG TCTCTTCTGTGCACACTATGCGCTGCCTAGAGCGGTGAGTG < 41bp 0.851951500774702 0.517729245591174 0.43893784 0.12625942 prediction 0.668444510367056 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068518 chr21:48068521 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_50853 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr19 10224730 10224730 1 + G T SARC 10224727 + 10224707 10224747 41 CACCTGCGACCCAAGCACGCCTGGGCCGTGAGCGCTGCCGG CACCTGCGACCCAAGCACGCCTGTGCCGTGAGCGCTGCCGG < 41bp 0.856803229924705 0.522630017911887 0.43503848 0.21620324 prediction 0.668346424025636 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224727 chr19:10224730 nonsynonymous SNV 0.230 3 24 hm5C_associated_SNPs_50858 0 0 2 BUD13 POSTAR2 ENCODE chr19:10224702-10224753
64251 chr11 67256794 67256794 1 + G T UCEC 67256791 + 67256771 67256811 41 CTCCGCAACATCGCGGTGGGCAAGGACCCCCTGGAGGGCCA CTCCGCAACATCGCGGTGGGCAATGACCCCCTGGAGGGCCA < 41bp 0.834125000360722 0.470935178122472 0.44449174 0.16387218 prediction 0.668250000721444 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67256791 chr11:67256794 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_50861 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:67256767-67256815
64251 chr19 16612013 16612013 1 + G T LUAD 16612010 + 16611990 16612030 41 GAGAGCTGACAGAATCCTCTCTGGGGGTGCACTCGAACTCG GAGAGCTGACAGAATCCTCTCTGTGGGTGCACTCGAACTCG < 41bp 0.834062341548184 0.4817847818078 0.5720386 0.09244406 prediction 0.668124683096369 Functional Loss - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16612010 chr19:16612013 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_50866 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr19:16611994-16612024
64251 chr16 11071251 11071251 1 + G T LUAD 11071248 + 11071228 11071268 41 ACGTGTACTCACTGGAGAACCAGGACAAGGTGGGTCCAGCC ACGTGTACTCACTGGAGAACCAGTACAAGGTGGGTCCAGCC < 41bp 0.834047626962468 0.48516015773256 0.8189219 0.91331553 prediction 0.668095253924937 Functional Loss - CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11071248 chr16:11071251 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_50867 0 0 1 GRWD1 POSTAR2 ENCODE chr16:11071154-11071267
64251 chr22 30824655 30824655 1 + A C UCEC 30824651 + 30824631 30824671 41 CTGGGTGGGTTTGAGCTGGACAGAAGCTTAGAGACAAAGGC CTGGGTGGGTTTGAGCTGGACAGACGCTTAGAGACAAAGGC < 41bp 0.834043144291829 0.48797396717029 0.31602427 0.26437426 prediction 0.668086288583659 Functional Loss - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30824651 chr22:30824655 nonsynonymous SNV 0.032 1 25 hm5C_associated_SNPs_50868 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:30824627-30824661
64251 chr13 52603479 52603479 1 + G T LUSC 52603476 + 52603456 52603496 41 TGCGCTCAGTGGCTGGAAGGCAAGAACTCCCCTGGAGCAGG TGCGCTCAGTGGCTGGAAGGCAATAACTCCCCTGGAGCAGG < 41bp 0.834000157554474 0.492756634179055 0.22213644 0.06042266 prediction 0.668000315108947 Functional Loss - UTP14C ENSG00000253797 CDS Human protein_coding chr13:52603476 chr13:52603479 nonsynonymous SNV 0.418 4 24 hm5C_associated_SNPs_50872 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:52603459-52603518
64251 chr22 50955905 50955905 1 + G T LUSC 50955902 + 50955882 50955922 41 CCAGGCCCTTGATTTCATCTCTGGAAAGAGGTGAGTTCTGC CCAGGCCCTTGATTTCATCTCTGTAAAGAGGTGAGTTCTGC < 41bp 0.847862161835152 0.513969714099049 0.09492287 0.09309426 prediction 0.667784895472206 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50955902 chr22:50955905 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_50877 0 0 1 DDX24 POSTAR2 ENCODE chr22:50955881-50955908
64251 chr15 51993418 51993418 1 + G T LUAD 51993415 + 51993395 51993435 41 AAAAGATGATAACTCCAACCCAGGAGGAAAGACAGATGAAC AAAAGATGATAACTCCAACCCAGTAGGAAAGACAGATGAAC < 41bp 0.840249599754489 0.506407994545006 0.8411559 0.7316545 prediction 0.667683210418967 Functional Loss - SCG3 ENSG00000104112 CDS Human protein_coding chr15:51993415 chr15:51993418 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_50880 0 0 1 UCHL5 POSTAR2 ENCODE chr15:51993366-51993438
64251 chr19 48254807 48254807 1 + A C LUSC 48254803 + 48254783 48254823 41 TGGACAGGCCGTTGGTTGGCCAGGATGAGTTTTTCCTGGAG TGGACAGGCCGTTGGTTGGCCAGGCTGAGTTTTTCCTGGAG < 41bp 0.833733284942079 0.463911902314273 0.8085935 0.8125342 prediction 0.667466569884157 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254803 chr19:48254807 nonsynonymous SNV 0.806 4 25 hm5C_associated_SNPs_50887 0 0 3 DDX24 POSTAR2 ENCODE chr19:48254778-48254850
64251 chr1 28862433 28862433 1 + G T LUAD 28862430 + 28862410 28862450 41 TGCTGAAATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAG TGCTGAAATCCAGGGGAAGCCGGTGCCACGTGAGATTCCAG < 41bp 0.862808225079881 0.529104034307159 0.92400885 0.89286757 prediction 0.667408381545444 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862430 chr1:28862433 nonsynonymous SNV 0.093 3 24 hm5C_associated_SNPs_50888 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:28862398-28862436
64251 chr12 12588624 12588624 1 + G T BLCA 12588621 + 12588601 12588641 41 TGGAGAAACTGGACTCTCAGCAGGTGTTGCAGCTCTGCCTC TGGAGAAACTGGACTCTCAGCAGTTGTTGCAGCTCTGCCTC < 41bp 0.87060253950747 0.536916718366991 0.9308145 0.53661865 prediction 0.667371642280958 Functional Loss - BORCS5 ENSG00000165714 CDS Human protein_coding chr12:12588621 chr12:12588624 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_50890 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:12588598-12588636
64251 chr1 26885394 26885394 1 + G T BLCA 26885391 + 26885371 26885411 41 GATGGAAGACGACGGCAAGCCTCGTGCCCCGCAGGCACCCC GATGGAAGACGACGGCAAGCCTCTTGCCCCGCAGGCACCCC < 41bp 0.833665032171389 0.483462876940944 0.13345301 0.040768504 prediction 0.667330064342779 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885391 chr1:26885394 nonsynonymous SNV 0.357 0 24 hm5C_associated_SNPs_50893 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr7 100773706 100773706 1 + G T UCEC 100773703 + 100773683 100773723 41 CCTCTCTGTCCCGGTGCAGACAAGGGCATGGCCCCCGCCCT CCTCTCTGTCCCGGTGCAGACAATGGCATGGCCCCCGCCCT < 41bp 0.833585115574081 0.468817508332533 0.92327046 0.24716678 prediction 0.667170231148162 Functional Loss - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100773703 chr7:100773706 nonsynonymous SNV 0.110 1 24 hm5C_associated_SNPs_50896 0 0 9 BUD13 POSTAR2 ENCODE chr7:100773642-100773737
64251 chr17 55065102 55065102 1 + G T UCEC 55065099 + 55065079 55065119 41 TGTGGATAATCCCGTGGGCACTGGGTTCAGTTATGTGAATG TGTGGATAATCCCGTGGGCACTGTGTTCAGTTATGTGAATG < 41bp 0.857090400321567 0.523562218971134 0.2578755 0.122780114 prediction 0.667056362700866 Functional Loss - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55065099 chr17:55065102 nonsynonymous SNV 0.686 5 24 hm5C_associated_SNPs_50897 0 0 1 SND1 POSTAR2 ENCODE chr17:55065062-55065108
64251 chr19 42399553 42399553 1 + G T UCEC 42399550 + 42399530 42399570 41 TGTCCCTGGACAGCCCAGACCGGGAACCAGGTGAGAGTTTC TGTCCCTGGACAGCCCAGACCGGTAACCAGGTGAGAGTTTC < 41bp 0.833502556191042 0.489955390331562 0.9157411 0.5597479 prediction 0.667005112382083 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42399550 chr19:42399553 stopgain 0.983 0 24 hm5C_associated_SNPs_50898 0 0 4 FMR1 POSTAR2 ENCODE chr19:42399477-42399557
64251 chr12 113822701 113822701 1 + G T LUAD 113822698 + 113822678 113822718 41 GTGGACTACAAGGCGTTCATCCCGGGTGGGCCCAGCCCCGG GTGGACTACAAGGCGTTCATCCCTGGTGGGCCCAGCCCCGG < 41bp 0.833495565455201 0.466503064492383 0.89009696 0.2799474 prediction 0.666991130910402 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113822698 chr12:113822701 synonymous SNV . 0 24 hm5C_associated_SNPs_50901 0 0 4 RPS3 POSTAR2 ENCODE chr12:113822692-113822727
64251 chr6 31785409 31785409 1 + G T UCEC 31785406 + 31785386 31785426 41 GGCCTGGGGGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCT GGCCTGGGGGCTTCGGGGCTCAGTGTCCCAAGGGAGGGTCT < 41bp 0.833428164456856 0.495465027645892 0.9329817 0.39040488 prediction 0.666856328913713 Functional Loss - HSPA1A ENSG00000204389 CDS Human protein_coding chr6:31785406 chr6:31785409 nonsynonymous SNV 0.821 1 24 hm5C_associated_SNPs_50903 0 0 25 CDC40 POSTAR2 ENCODE chr6:31785333-31785439
64251 chr19 10363251 10363251 1 + A C rs113197610 10363247 + 10363227 10363267 41 GTCTCCCGGAGCCCGTGCTGCGCAAAGTCGAGCTCCCGGTA GTCTCCCGGAGCCCGTGCTGCGCACAGTCGAGCTCCCGGTA < 41bp 0.833361838502661 0.450473560468483 0.38847008 0.1723178 prediction 0.666723677005322 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10363247 chr19:10363251 nonsynonymous SNV 0.137 0 25 hm5C_associated_SNPs_50909 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:10363240-10363260
64251 chr3 14708972 14708972 1 + G T UCEC 14708969 + 14708949 14708989 41 TTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTTGAGAAAC TTGGGTATTTTGCCTTTGCCCGATACAAAGAGTTGAGAAAC < 41bp 0.841263277092999 0.507985765843459 0.90287757 0.63706905 prediction 0.66655502249908 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14708969 chr3:14708972 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_50911 0 0 1 U2AF1 POSTAR2 ENCODE chr3:14708919-14708976
64251 chr4 169842780 169842780 1 + G T LUAD 169842777 + 169842757 169842797 41 AAGATGCTGGTGCGTGAGAACGGGGTGCACTCTCTGATCAT AAGATGCTGGTGCGTGAGAACGGTGTGCACTCTCTGATCAT < 41bp 0.833240875450989 0.491453186789184 0.9309131 0.4536246 prediction 0.666481750901977 Functional Loss - PALLD ENSG00000129116 CDS Human protein_coding chr4:169842777 chr4:169842780 synonymous SNV . 0 24 hm5C_associated_SNPs_50912 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:169842774-169842788
64251 chr11 43876813 43876813 1 + A C rs11037683 43876809 + 43876789 43876829 41 GAAGAACTAAGCATTGATAACTGCATTGTAACTTGGCCAGA GAAGAACTAAGCATTGATAACTGCCTTGTAACTTGGCCAGA < 41bp 0.833169130658318 0.486079484964645 0.69050753 0.6044192 prediction 0.666338261316637 Functional Loss - HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43876809 chr11:43876813 . . 0 25 hm5C_associated_SNPs_50916 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:43876726-43876841
64251 chr2 216214334 216214334 1 + G T SKCM 216214331 + 216214311 216214351 41 TGATTGAGGCCTGCGACGAACTGGGAATCATCCTCGCTCAT TGATTGAGGCCTGCGACGAACTGTGAATCATCCTCGCTCAT < 41bp 0.833117225110258 0.473078895860954 0.8916553 0.49828285 prediction 0.666234450220516 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216214331 chr2:216214334 stopgain 0.976 1 24 hm5C_associated_SNPs_50920 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:216214302-216214337
64251 chr7 45928308 45928308 1 + G T STAD 45928305 + 45928285 45928325 41 GTACTGCTCCTGCTGACTGTCCAGGTCGGCGTGACAGCCGG GTACTGCTCCTGCTGACTGTCCATGTCGGCGTGACAGCCGG < 41bp 0.833076921733216 0.478999971503369 0.4777818 0.1161755 prediction 0.666153843466432 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45928305 chr7:45928308 nonsynonymous SNV 0.050 0 24 hm5C_associated_SNPs_50922 0 0 10 AUH POSTAR2 ENCODE chr7:45928294-45928326
64251 chr17 43175843 43175843 1 + G T LUAD 43175840 + 43175820 43175860 41 GTTCTGATCCGAGAGATCACCAGGCGGGTTCACCTGGAGGG GTTCTGATCCGAGAGATCACCAGTCGGGTTCACCTGGAGGG < 41bp 0.83306921211956 0.471435022979682 0.90682316 0.3892014 prediction 0.66613842423912 Functional Loss - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43175840 chr17:43175843 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_50923 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:43175834-43175862
64251 chr11 70171109 70171109 1 + G T SKCM 70171106 + 70171086 70171126 41 TATTTGAACACCACAAAGCTCTGGATGAAAAGGTGCCATCA TATTTGAACACCACAAAGCTCTGTATGAAAAGGTGCCATCA < 41bp 0.834123737516382 0.501144488785649 0.87644273 0.33570552 prediction 0.665958497461467 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70171106 chr11:70171109 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_50930 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:70171091-70171112
64251 chr1 28598902 28598902 1 + G T UCEC 28598899 + 28598879 28598919 41 CTGGGCCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAG CTGGGCCTCCACCGGGCCCCCGATAAGCTGCGCAAACTCAG < 41bp 0.856587445169369 0.523649384584853 0.5734806 0.2259374 prediction 0.665876121169032 Functional Loss - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28598899 chr1:28598902 nonsynonymous SNV 0.892 0 24 hm5C_associated_SNPs_50935 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:28598900-28598920
64251 chr2 132021678 132021678 1 + G T LUAD 132021675 + 132021655 132021695 41 TGCGCCTAGACCTGGCTGGGCGGGAACTGCCTGACTACCTC TGCGCCTAGACCTGGCTGGGCGGTAACTGCCTGACTACCTC < 41bp 0.852828448538694 0.519904670019565 0.6785793 0.2576462 prediction 0.665847557038257 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021675 chr2:132021678 stopgain 0.010 0 24 hm5C_associated_SNPs_50936 0 0 2 EIF3H POSTAR2 ENCODE chr2:132021649-132021712
64251 chr1 1563074 1563074 1 + G T LUAD 1563071 + 1563051 1563091 41 AGGAACCAGCCCGAGGCCACCAGGGTGCTCCTGAGTGCTGG AGGAACCAGCCCGAGGCCACCAGTGTGCTCCTGAGTGCTGG < 41bp 0.839547210569139 0.50662682350136 0.90460813 0.22447738 prediction 0.665840774135559 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1563071 chr1:1563074 nonsynonymous SNV 0.298 1 24 hm5C_associated_SNPs_50937 0 0 9 BUD13 POSTAR2 ENCODE chr1:1562941-1563086
64251 chr20 3784086 3784086 1 + G T GBM 3784083 + 3784063 3784103 41 TTGCCCCTGGAACGCGACGCCGAGAGCTTCCTACTGAAGAG TTGCCCCTGGAACGCGACGCCGATAGCTTCCTACTGAAGAG < 41bp 0.848818445145857 0.515900005392161 0.7934731 0.24463421 prediction 0.665836879507391 Functional Loss - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3784083 chr20:3784086 nonsynonymous SNV 0.089 4 24 hm5C_associated_SNPs_50938 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:3784063-3784094
64251 chr16 28975123 28975123 1 + G T HNSC 28975120 + 28975100 28975140 41 CTTTGATGGGACAAAGCTTTCAGGCAGGGAGCTGCCAGCTG CTTTGATGGGACAAAGCTTTCAGTCAGGGAGCTGCCAGCTG < 41bp 0.8445187969315 0.511679908974748 0.49704674 0.1245431 prediction 0.665677775913504 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28975120 chr16:28975123 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_50945 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:28975067-28975138
64251 chr10 126631286 126631286 1 + G T LGG 126631283 + 126631263 126631303 41 TCCAGACTCTAGTGCAAGACCAAGGGTGAAATCTTCGTATA TCCAGACTCTAGTGCAAGACCAATGGTGAAATCTTCGTATA < 41bp 0.846456454490518 0.513702018505958 0.91117775 0.55636716 prediction 0.66550887196912 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126631283 chr10:126631286 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_50948 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:126631240-126631294
64251 chr19 56172528 56172528 1 + G T rs73936311 56172525 + 56172505 56172545 41 AGACAAGCCCGGCGCCTCTACGTGGGCAACATCCCCTTTGG AGACAAGCCCGGCGCCTCTACGTTGGCAACATCCCCTTTGG < 41bp 0.832745151675187 0.458935912920139 0.84693074 0.27100116 prediction 0.665490303350375 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172525 chr19:56172528 synonymous SNV . 0 24 hm5C_associated_SNPs_50949 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:56172484-56172533
64251 chr7 100732822 100732822 1 + G T LUAD 100732819 + 100732799 100732839 41 CTGGTCGTGTCCCTCAGTAACGGGACCATCCACATCTTTCG CTGGTCGTGTCCCTCAGTAACGGTACCATCCACATCTTTCG < 41bp 0.855629007656855 0.522907728896837 0.8957349 0.18078691 prediction 0.665442557520036 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732819 chr7:100732822 synonymous SNV . 0 24 hm5C_associated_SNPs_50950 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:100732822-100732857
64251 chr11 61563474 61563474 1 + A C UCEC 61563470 + 61563450 61563490 41 AATTCCACCTGAGCCGGATTCTGCAGGAGCTGGGCCTGAAC AATTCCACCTGAGCCGGATTCTGCCGGAGCTGGGCCTGAAC < 41bp 0.885760622873765 0.553075548785231 0.7685586 0.44053757 prediction 0.665370148177069 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563470 chr11:61563474 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_50951 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:61563420-61563480
64251 chr10 30736811 30736811 1 + G T UCEC 30736808 + 30736788 30736828 41 TATTGGTTCTGATTTTATTCCTCGGGGCGCCTTTGGAAAGG TATTGGTTCTGATTTTATTCCTCTGGGCGCCTTTGGAAAGG < 41bp 0.832654448389866 0.482714009472089 0.08855584 0.03949964 prediction 0.665308896779733 Functional Loss - MAP3K8 ENSG00000107968 CDS Human protein_coding chr10:30736808 chr10:30736811 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_50954 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:30736786-30736818
64251 chr22 32871230 32871230 1 + G T rs11703157 32871227 + 32871207 32871247 41 GGCGTGGCCGGGCGATAGGCCAAGTGCGGGGACGCCGGGGG GGCGTGGCCGGGCGATAGGCCAATTGCGGGGACGCCGGGGG < 41bp 0.839251009700396 0.506657380894155 0.83903176 0.30725542 prediction 0.665187257612483 Functional Loss - FBXO7 ENSG00000100225 UTR5 Human protein_coding chr22:32871227 chr22:32871230 . . 0 24 hm5C_associated_SNPs_50960 0 0 4 CSTF2T POSTAR2 ENCODE chr22:32871167-32871243
64251 chr14 94568245 94568245 1 + G T HNSC 94568242 + 94568222 94568262 41 GCCGCATCCTCCATAGCAGCCAAGATGATGTCTACAGCAGC GCCGCATCCTCCATAGCAGCCAATATGATGTCTACAGCAGC < 41bp 0.832589376677546 0.470183805732663 0.25540277 0.11596975 prediction 0.665178753355092 Functional Loss - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568242 chr14:94568245 nonsynonymous SNV 0.126 1 24 hm5C_associated_SNPs_50961 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:94568206-94568249
64251 chr19 50549315 50549315 1 + A C HNSC 50549311 + 50549291 50549331 41 AAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGATT AAGTGCCACGAGAGTGTTCACGCCCGAGAAAAACAAGGATT < 41bp 0.832515923513198 0.452789445142923 0.28627878 0.093434304 prediction 0.665031847026395 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549311 chr19:50549315 synonymous SNV . 0 25 hm5C_associated_SNPs_50966 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50549301-50549319
64251 chr4 728725 728725 1 + A C LUSC 728721 + 728701 728741 41 ACCTGTGCTTTGATGACAGTCTGCAGGAGCTGCCTGGTGAA ACCTGTGCTTTGATGACAGTCTGCCGGAGCTGCCTGGTGAA < 41bp 0.83247595162685 0.463505663832066 0.29266098 0.13833037 prediction 0.664951903253699 Functional Loss - PCGF3 ENSG00000185619 CDS Human protein_coding chr4:728721 chr4:728725 synonymous SNV . 0 25 hm5C_associated_SNPs_50971 0 0 14 BUD13 POSTAR2 ENCODE chr4:728685-728770
64251 chr7 37960767 37960767 1 + G T KIRP 37960764 + 37960744 37960784 41 CCTACGACGGGCTCAACCAGCGCGTGCGGGTGCTGGACGAG CCTACGACGGGCTCAACCAGCGCTTGCGGGTGCTGGACGAG < 41bp 0.832439233010285 0.493392082344949 0.6848539 0.33908677 prediction 0.66487846602057 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960764 chr7:37960767 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_50974 0 0 2 SND1 POSTAR2 ENCODE chr7:37960756-37960801
64251 chr2 120194569 120194569 1 + G T SKCM 120194566 + 120194546 120194586 41 GCCCTGGCTGTGGTCCTGTCCTCGGTCTCCATTTGTGATGG GCCCTGGCTGTGGTCCTGTCCTCTGTCTCCATTTGTGATGG < 41bp 0.849766868666946 0.517377387999652 0.031938106 0.0058654547 prediction 0.664778961334589 Functional Loss - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194566 chr2:120194569 nonsynonymous SNV 0.098 0 24 hm5C_associated_SNPs_50976 0 0 4 DDX3X POSTAR2 ENCODE chr2:120194534-120194570
64251 chr19 50154183 50154183 1 + G T LUAD 50154180 + 50154160 50154200 41 GCCCGTCACCTCACCTTGGGCACGGGAGACGGGGGCCCTGC GCCCGTCACCTCACCTTGGGCACTGGAGACGGGGGCCCTGC < 41bp 0.832323751778046 0.476599713024118 0.7218919 0.26334205 prediction 0.664647503556093 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154180 chr19:50154183 synonymous SNV . 0 24 hm5C_associated_SNPs_50983 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50154138-50154194
64251 chr19 50905324 50905324 1 + G T BLCA 50905321 + 50905301 50905341 41 TGGCCATCAGCCGGGACAGTCGCGGGGGGAGGGAGCTGACT TGGCCATCAGCCGGGACAGTCGCTGGGGGAGGGAGCTGACT < 41bp 0.832308247397092 0.471483052565467 0.92644584 0.74246 prediction 0.664616494794183 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905321 chr19:50905324 nonsynonymous SNV 0.021 2 24 hm5C_associated_SNPs_50986 0 0 8 BUD13 POSTAR2 ENCODE chr19:50905323-50905363
64251 chr2 71303782 71303782 1 + G T SARC 71303779 + 71303759 71303799 41 CCGCTATATCTTCAGGAAGGCTGGGGAGATGCTGGGCAGAC CCGCTATATCTTCAGGAAGGCTGTGGAGATGCTGGGCAGAC < 41bp 0.832264307831012 0.471340252343288 0.7915168 0.2020947 prediction 0.664528615662025 Functional Loss - NAGK ENSG00000124357 CDS Human protein_coding chr2:71303779 chr2:71303782 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_50989 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:71303765-71303800
64251 chr7 65705680 65705680 1 + G T KIRC 65705677 + 65705657 65705697 41 CCACACTCATGAGGGCCATGCTGGACGCACATCCTGACATT CCACACTCATGAGGGCCATGCTGTACGCACATCCTGACATT < 41bp 0.855275960143985 0.523021861119079 0.89941835 0.22170967 prediction 0.664508198049812 Functional Loss - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705677 chr7:65705680 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_50991 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:65705663-65705711
64251 chr19 19638848 19638848 1 + G T LUSC 19638845 + 19638825 19638865 41 TCTGTGTTCCACACAACCCGCTGGGTGCCCCCCTTGATCGG TCTGTGTTCCACACAACCCGCTGTGTGCCCCCCTTGATCGG < 41bp 0.865652144747154 0.533437890404059 0.75207937 0.25774115 prediction 0.664428508686191 Functional Loss - NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638845 chr19:19638848 nonsynonymous SNV 0.437 4 24 hm5C_associated_SNPs_50996 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr19 58153284 58153284 1 + G T LUAD 58153281 + 58153261 58153301 41 GAACCACCAGAGAGTTCACACTGGAGAAAGACCTGTTGAGT GAACCACCAGAGAGTTCACACTGTAGAAAGACCTGTTGAGT < 41bp 0.841049856384417 0.508961933402975 0.25985628 0.055302978 prediction 0.664175845962885 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58153281 chr19:58153284 nonsynonymous SNV 0.960 3 24 hm5C_associated_SNPs_51003 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:58153284-58153305
64251 chr2 130948186 130948186 1 + G T LUAD 130948183 + 130948163 130948203 41 CGGGCCTGGGAAGAGCCCTACACGGGGCAGCACCTAGGATG CGGGCCTGGGAAGAGCCCTACACTGGGCAGCACCTAGGATG < 41bp 0.854726832786344 0.5226641987509 0.63469803 0.26053956 prediction 0.664125268070887 Functional Loss - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130948183 chr2:130948186 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_51007 0 0 22 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:130948158-130948192
64251 chr5 140076836 140076836 1 + G T SARC 140076833 + 140076813 140076853 41 TGCTGCTGCAGACCCCAACTCAGGCTGGGGAGGAGCCCCTG TGCTGCTGCAGACCCCAACTCAGTCTGGGGAGGAGCCCCTG < 41bp 0.831943956003042 0.469586572668436 0.7921563 0.18645102 prediction 0.663887912006083 Functional Loss - HARS2 ENSG00000112855 CDS Human protein_coding chr5:140076833 chr5:140076836 nonsynonymous SNV 0.940 0 24 hm5C_associated_SNPs_51016 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:140076804-140076840
64251 chr11 126146398 126146398 1 + G T SARC 126146395 + 126146375 126146415 41 AAGGATTAGGTAGCAACTACCTAGGTGGTCGTAGCCCCACT AAGGATTAGGTAGCAACTACCTATGTGGTCGTAGCCCCACT < 41bp 0.83188953212676 0.478740259363653 0.79703915 0.19564775 prediction 0.66377906425352 Functional Loss - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146395 chr11:126146398 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_51019 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:126146373-126146402
64251 chr7 106508280 106508280 1 + G T LUSC 106508277 + 106508257 106508297 41 CGGCGGACTTCTACCACCGGCTGGGACCGCATCACTTCCTC CGGCGGACTTCTACCACCGGCTGTGACCGCATCACTTCCTC < 41bp 0.831877672022916 0.463150966034334 0.43818814 0.36511362 prediction 0.663755344045833 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508277 chr7:106508280 stopgain 0.006 0 24 hm5C_associated_SNPs_51020 0 0 2 FMR1 POSTAR2 ENCODE chr7:106508240-106508289
64251 chr8 66605988 66605988 1 + G T UCEC 66605985 + 66605965 66606005 41 AGAAGAAGGAGAGTGTTCAGCAAGACTAAGGTTAGTTTGGA AGAAGAAGGAGAGTGTTCAGCAATACTAAGGTTAGTTTGGA < 41bp 0.831817659316235 0.494871770518232 0.4304084 0.30510676 prediction 0.663635318632471 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66605985 chr8:66605988 nonsynonymous SNV 0.425 3 24 hm5C_associated_SNPs_51021 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:66605973-66605994
64251 chr3 10916719 10916719 1 + G T LUSC 10916716 + 10916696 10916736 41 GATACGAGGGGTCACGTTGCCCGGGGCCTCAGAGGGCATCA GATACGAGGGGTCACGTTGCCCGTGGCCTCAGAGGGCATCA < 41bp 0.851133560179591 0.519348685574569 0.89077604 0.13239759 prediction 0.663569749210043 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10916716 chr3:10916719 nonsynonymous SNV 0.559 5 24 hm5C_associated_SNPs_51025 0 0 1 RPS3 POSTAR2 ENCODE chr3:10916666-10916781
64251 chr8 123965503 123965503 1 + G T LUSC 123965500 + 123965480 123965520 41 TCTCGGAGAGGCGGAAGCTTCGAGACAGCATGGAACAAGCT TCTCGGAGAGGCGGAAGCTTCGATACAGCATGGAACAAGCT < 41bp 0.842566077723023 0.510812332321305 0.44287473 0.0722951 prediction 0.663507490803438 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965500 chr8:123965503 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_51027 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:123965500-123965520
64251 chr19 41903836 41903836 1 + G T BLCA 41903833 + 41903813 41903853 41 GCCTGGGGCTCGGGGACTGGCTAGATCTGTGAGTACCTGGG GCCTGGGGCTCGGGGACTGGCTATATCTGTGAGTACCTGGG < 41bp 0.845777294713961 0.514035121355146 0.8889307 0.8961381 prediction 0.663484346717629 Functional Loss - BCKDHA ENSG00000248098 CDS Human protein_coding chr19:41903833 chr19:41903836 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_51028 0 0 1 FTO POSTAR2 ENCODE chr19:41903754-41903838
64251 chr2 219294587 219294587 1 + G T UCEC 219294584 + 219294564 219294604 41 GACTCTAGGACTGTTACATCCTGGACCAGGGGGGCCTGAAG GACTCTAGGACTGTTACATCCTGTACCAGGGGGGCCTGAAG < 41bp 0.831736138591121 0.469423115875992 0.07891658 0.023848772 prediction 0.663472277182242 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219294584 chr2:219294587 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51029 0 0 9 FASTKD2 POSTAR2 ENCODE chr2:219294580-219294643
64251 chr16 68330713 68330713 1 + G T STAD 68330710 + 68330690 68330730 41 CATTGTTTATTCGGAATGTCCTGGGTGAGCTTCTCTGTGCC CATTGTTTATTCGGAATGTCCTGTGTGAGCTTCTCTGTGCC < 41bp 0.831665020776519 0.475771986983475 0.9014658 0.19264549 prediction 0.663330041553039 Functional Loss - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330710 chr16:68330713 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_51033 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr16:68330690-68330716
64251 chr19 18474655 18474655 1 + G T rs151086105 18474652 + 18474632 18474672 41 CCGTGACCAGGGAGGCCAGCCTGGGAGGTCCAGATGCCCAG CCGTGACCAGGGAGGCCAGCCTGTGAGGTCCAGATGCCCAG < 41bp 0.831662239195606 0.489543274975929 0.6942425 0.2946197 prediction 0.663324478391213 Functional Loss - PGPEP1 ENSG00000130517 UTR3 Human protein_coding chr19:18474652 chr19:18474655 . . 0 24 hm5C_associated_SNPs_51034 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:18474651-18474676
64251 chr19 50436122 50436122 1 + G T UCEC 50436119 + 50436099 50436139 41 ACCCACATCCTGCCACCACCCGAGGGGACCGCAAGCAAAAG ACCCACATCCTGCCACCACCCGATGGGACCGCAAGCAAAAG < 41bp 0.831656570232441 0.468457659406876 0.9136332 0.25293937 prediction 0.663313140464881 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50436119 chr19:50436122 nonsynonymous SNV 0.978 4 24 hm5C_associated_SNPs_51035 0 0 7 IGF2BP2 POSTAR2 ENCODE chr19:50436097-50436127
64251 chr6 3154124 3154124 1 - C A COAD 3154127 - 3154107 3154147 41 GCCGACGAACAAGGGGAGTTCGAGGAGGAGGAGGGCGAGGA GCCGACGAACAAGGGGAGTTCGATGAGGAGGAGGGCGAGGA < 41bp 0.831626245122476 0.477360017034285 0.9149684 0.89574337 prediction 0.663252490244953 Functional Loss - TUBB2A ENSG00000137267 CDS Human protein_coding chr6:3154127 chr6:3154124 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_51037 0 0 2 DDX6 POSTAR2 ENCODE chr6:3153929-3154129
64251 chr11 63668456 63668456 1 + G T THCA 63668453 + 63668433 63668473 41 GATGGTGTCCATGGGTTATACACGGGAAGAGATCCAGGACT GATGGTGTCCATGGGTTATACACTGGAAGAGATCCAGGACT < 41bp 0.831616924643418 0.464300110454895 0.19076923 0.032435864 prediction 0.663233849286837 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63668453 chr11:63668456 nonsynonymous SNV 0.675 0 24 hm5C_associated_SNPs_51038 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:63668435-63668456
64251 chr1 221055673 221055673 1 + G T LUAD 221055670 + 221055650 221055690 41 GAAAGCAGCTGGCGGCGATGCTGGGCCTCACGGACGCACAG GAAAGCAGCTGGCGGCGATGCTGTGCCTCACGGACGCACAG < 41bp 0.831603698535596 0.469646670668543 0.8861573 0.2548648 prediction 0.663207397071192 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221055670 chr1:221055673 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_51039 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:221055663-221055690
64251 chr9 131671515 131671515 1 + A C BRCA 131671511 + 131671491 131671531 41 ACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAAC ACTGCCGCAAGCTGCGCTACCTGGCCCTCAGCCACAACAAC < 41bp 0.831588634901744 0.457900213549746 0.1839731 0.14520097 prediction 0.663177269803489 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671511 chr9:131671515 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_51040 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:131671483-131671515
64251 chr16 1748864 1748864 1 + A C UCEC 1748860 + 1748840 1748880 41 GCCAGGTGAGAAAGGCAGCGCCAGAAAAGCAGGCCCCGCCA GCCAGGTGAGAAAGGCAGCGCCAGCAAAGCAGGCCCCGCCA < 41bp 0.85383878983272 0.522306228934576 0.86306727 0.42038777 prediction 0.66306512179629 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748860 chr16:1748864 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_51043 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1748860-1748880
64251 chr9 131479176 131479176 1 + G T UCEC 131479173 + 131479153 131479193 41 GACCTCATGATGCAGATCCACGAGGATGTCTTCCCCGAGCC GACCTCATGATGCAGATCCACGATGATGTCTTCCCCGAGCC < 41bp 0.831417559382358 0.46259474556763 0.87973773 0.2642972 prediction 0.662835118764716 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131479173 chr9:131479176 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_51050 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:131479167-131479189
64251 chr15 90167880 90167880 1 + A C LUSC 90167876 + 90167856 90167896 41 GGCTACCCAGGCCCTGGTCTCAGGAGTGATTGGCATGCATC GGCTACCCAGGCCCTGGTCTCAGGCGTGATTGGCATGCATC < 41bp 0.831403772174501 0.48264597139242 0.9556409 0.94372714 prediction 0.662807544349001 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90167876 chr15:90167880 nonsynonymous SNV 0.031 1 25 hm5C_associated_SNPs_51052 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90167860-90167885
64251 chr9 101594148 101594148 1 + A C LUAD 101594144 + 101594124 101594164 41 CTGGGGAACTCCGGGGAGCCCCAGATCGGCGGTTTCGACTG CTGGGGAACTCCGGGGAGCCCCAGCTCGGCGGTTTCGACTG < 41bp 0.878800157032544 0.547407801565006 0.36893928 0.14517954 prediction 0.662784710935076 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101594144 chr9:101594148 nonsynonymous SNV 0.972 1 25 hm5C_associated_SNPs_51053 0 0 1 DDX24 POSTAR2 ENCODE chr9:101594118-101594152
64251 chr20 60868968 60868968 1 + G T UCEC 60868965 + 60868945 60868985 41 GGCCTGGAGGGGCCTGGGGCCCGGGACCGGAGGCTGACGAG GGCCTGGAGGGGCCTGGGGCCCGTGACCGGAGGCTGACGAG < 41bp 0.859188090448513 0.527816823881064 0.84614384 0.46292165 prediction 0.662742533134899 Functional Loss - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60868965 chr20:60868968 synonymous SNV . 0 24 hm5C_associated_SNPs_51055 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60868961-60869001
64251 chr17 61895405 61895405 1 + G T GBM 61895402 + 61895382 61895422 41 GGGGCAGCAGCCGTCACAGTCACGGAGAGACTGGCAATCGG GGGGCAGCAGCCGTCACAGTCACTGAGAGACTGGCAATCGG < 41bp 0.86244295230764 0.53109469948454 0.4983183 0.22687355 prediction 0.6626965056462 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61895402 chr17:61895405 stopgain 0.986 0 24 hm5C_associated_SNPs_51056 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:61895364-61895442
64251 chr3 49750049 49750049 1 + G T COAD 49750046 + 49750026 49750066 41 ATCAACAGCTACAGTGCTCTCAAGAATTACTTTGGTCCCGT ATCAACAGCTACAGTGCTCTCAATAATTACTTTGGTCCCGT < 41bp 0.831330275037446 0.481984418462888 0.85605454 0.251476 prediction 0.662660550074893 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49750046 chr3:49750049 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51059 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:49750025-49750063
64251 chr22 44532347 44532347 1 + A C rs201831464 44532343 + 44532323 44532363 41 TATTTTGGGGTTTTCAGAAACGGGAAGGCCTGCTGCATTCC TATTTTGGGGTTTTCAGAAACGGGCAGGCCTGCTGCATTCC < 41bp 0.875239846216703 0.543948159758139 0.9410926 0.8587247 prediction 0.662583372917129 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44532343 chr22:44532347 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_51063 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:44532339-44532369
64251 chr16 67915267 67915267 1 + G T STAD 67915264 + 67915244 67915284 41 CCTGCCAAGGACTGGAAGACCAAGGGATCCCCTCGAACCTC CCTGCCAAGGACTGGAAGACCAATGGATCCCCTCGAACCTC < 41bp 0.874402538062533 0.543175246814683 0.9375378 0.6708941 prediction 0.6624545824957 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915264 chr16:67915267 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51067 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:67915251-67915281
64251 chr16 28912188 28912188 1 + A C UCEC 28912184 + 28912164 28912204 41 TCGCCCGTGTGGAGCCCTCGCACAAGTCCAAGATTGTGGAG TCGCCCGTGTGGAGCCCTCGCACACGTCCAAGATTGTGGAG < 41bp 0.831201080683539 0.440940293619592 0.09102476 0.08061582 prediction 0.662402161367079 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28912184 chr16:28912188 nonsynonymous SNV 0.985 5 25 hm5C_associated_SNPs_51068 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28912186-28912218
64251 chr19 41089339 41089339 1 + G T HNSC 41089336 + 41089316 41089356 41 CAGCCCATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCT CAGCCCATCACCAGTTATGACGCTGCAGGCTCCTTCCTCCT < 41bp 0.831192760151032 0.465831480574413 0.89480585 0.5407528 prediction 0.662385520302064 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41089336 chr19:41089339 synonymous SNV . 0 24 hm5C_associated_SNPs_51069 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:41089329-41089352
64251 chr5 141307750 141307750 1 + G T COAD 141307747 + 141307727 141307767 41 CGTGCTGGCCCTGCAGCTGGCAAGGCAGATCCACTTCCAGG CGTGCTGGCCCTGCAGCTGGCAATGCAGATCCACTTCCAGG < 41bp 0.831139860940376 0.457146450965386 0.7502653 0.19200546 prediction 0.662279721880752 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141307747 chr5:141307750 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51071 0 0 2 BUD13 POSTAR2 ENCODE chr5:141307706-141307754
64251 chr11 70049652 70049652 1 + G T SARC 70049649 + 70049629 70049669 41 GAGCTCAAGTTCCTATGCCTCGGGCGCGTGGGCAAGCGCAA GAGCTCAAGTTCCTATGCCTCGGTCGCGTGGGCAAGCGCAA < 41bp 0.857260533051696 0.52616576317976 0.8758465 0.111935765 prediction 0.662189539743871 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049649 chr11:70049652 synonymous SNV . 0 24 hm5C_associated_SNPs_51074 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr11:70049637-70049656
64251 chr10 45924191 45924191 1 + G T UCEC 45924188 + 45924168 45924208 41 CTGTATAAGAACCTGGCCAACAAGATTGTCCCCATTGCCAT CTGTATAAGAACCTGGCCAACAATATTGTCCCCATTGCCAT < 41bp 0.859771672446783 0.52870614982191 0.41427776 0.17720357 prediction 0.662131045249747 Functional Loss - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45924188 chr10:45924191 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51075 0 0 1 ZNF622 POSTAR2 ENCODE chr10:45924167-45924196
64251 chr17 7214775 7214775 1 + A C STAD 7214771 + 7214751 7214791 41 ACCTTGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAA ACCTTGGCAAGGAGATTGAGCAGACGTACGACTGTGGAGAA < 41bp 0.831062818862807 0.465724083909052 0.46998182 0.50453615 prediction 0.662125637725614 Functional Loss - EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214771 chr17:7214775 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51076 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:7214774-7214802
64251 chr6 26158661 26158661 1 + G T BLCA 26158658 + 26158638 26158678 41 CTGGCGCATTACAACAAGCGCTCGACCATCACCTCCAGGGA CTGGCGCATTACAACAAGCGCTCTACCATCACCTCCAGGGA < 41bp 0.831044403609895 0.493631823712832 0.06507793 0.26077664 prediction 0.662088807219789 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158658 chr6:26158661 synonymous SNV . 0 24 hm5C_associated_SNPs_51077 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704218 chr6:26158660-26158680
64251 chr5 153432616 153432616 1 + G T KIRC 153432613 + 153432593 153432633 41 ACCCTACGTGTTATCTTCACCTCGGGAGACATGAGTGTCTA ACCCTACGTGTTATCTTCACCTCTGGAGACATGAGTGTCTA < 41bp 0.831040700280437 0.499641740984542 0.06127113 0.21291727 prediction 0.662081400560874 Functional Loss - MFAP3 ENSG00000037749 CDS Human protein_coding chr5:153432613 chr5:153432616 synonymous SNV . 0 24 hm5C_associated_SNPs_51078 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153432578-153432625
64251 chr2 43926894 43926894 1 + G T UCEC 43926891 + 43926871 43926911 41 CTCAGAACAGAATCGGAAAACAAGAACAAGCTTTGCCACAG CTCAGAACAGAATCGGAAAACAATAACAAGCTTTGCCACAG < 41bp 0.83215854375523 0.501123269442264 0.36214083 0.121389985 prediction 0.662070548625932 Functional Loss - PLEKHH2 ENSG00000152527 CDS Human protein_coding chr2:43926891 chr2:43926894 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_51080 0 0 1 ZNF622 POSTAR2 ENCODE chr2:43926829-43926902
64251 chr12 125626690 125626690 1 + G T LUAD 125626687 + 125626667 125626707 41 TGCCGTCAAACAGATCATCGCTGGAAAAGCCGTGGAGCAAG TGCCGTCAAACAGATCATCGCTGTAAAAGCCGTGGAGCAAG < 41bp 0.849148725867847 0.51812357666396 0.3427869 0.12765789 prediction 0.662050298407775 Functional Loss - AACS ENSG00000081760 CDS Human protein_coding chr12:125626687 chr12:125626690 nonsynonymous SNV 0.015 4 24 hm5C_associated_SNPs_51082 0 0 1 U2AF2 POSTAR2 ENCODE chr12:125626607-125626699
64251 chr20 11899149 11899149 1 + A C LUAD 11899145 + 11899125 11899165 41 CCCCGTAAAAAGCCAGCCAACTCCAGCAGCACCAGCGTCCA CCCCGTAAAAAGCCAGCCAACTCCCGCAGCACCAGCGTCCA < 41bp 0.83099782442233 0.433869894308854 0.90410143 0.02562511 prediction 0.66199564884466 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11899145 chr20:11899149 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51085 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:11899129-11899159
64251 chr1 905684 905684 1 + G T UCEC 905681 + 905661 905701 41 TCCTGGACCTGGAGAACCAGCGAGAAAACCTGGAGCAGCCA TCCTGGACCTGGAGAACCAGCGATAAAACCTGGAGCAGCCA < 41bp 0.83098559139872 0.475752028361502 0.9194356 0.9101613 prediction 0.66197118279744 Functional Loss - PLEKHN1 ENSG00000187583 CDS Human protein_coding chr1:905681 chr1:905684 stopgain 0.007 0 24 hm5C_associated_SNPs_51087 0 0 1 PPIG POSTAR2 ENCODE chr1:905669-905777
64251 chr16 46943636 46943636 1 + G T LUSC 46943633 + 46943613 46943653 41 CGTCTCCGGGGGCGGCAAGTCACGGACAGGTGTGATGATCC CGTCTCCGGGGGCGGCAAGTCACTGACAGGTGTGATGATCC < 41bp 0.830867873240864 0.459533121832054 0.2351538 0.030484289 prediction 0.661735746481727 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46943633 chr16:46943636 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_51091 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:46943607-46943636
64251 chr3 160395581 160395581 1 + G T BLCA 160395578 + 160395558 160395598 41 GTGAAGAAGCTTTGCAGTGACCGGAACTGGTATGTGCAACC GTGAAGAAGCTTTGCAGTGACCGTAACTGGTATGTGCAACC < 41bp 0.831641157860421 0.500798955279851 0.84309936 0.2080046 prediction 0.661684405161139 Functional Loss - ARL14 ENSG00000179674 CDS Human protein_coding chr3:160395578 chr3:160395581 synonymous SNV . 0 24 hm5C_associated_SNPs_51093 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:160395572-160395594
64251 chr9 123931934 123931934 1 + G T DLBC 123931931 + 123931911 123931951 41 GCAGCAATTGGTGGAGAAATCAGGTGAGCTGTTGGCCCTCC GCAGCAATTGGTGGAGAAATCAGTTGAGCTGTTGGCCCTCC < 41bp 0.844076366767261 0.513404878046717 0.9081397 0.6915842 prediction 0.661342977441088 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123931931 chr9:123931934 nonsynonymous SNV 0.069 0 24 hm5C_associated_SNPs_51097 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:123931931-123931963
64251 chr2 46808686 46808686 1 - C A COAD 46808689 - 46808669 46808709 41 CTTGGAGCGACCTTTGGCTACGTGGCTGGCCTTGTTATTTC CTTGGAGCGACCTTTGGCTACGTTGCTGGCCTTGTTATTTC < 41bp 0.843311229619207 0.512662360849134 0.108520985 0.036361575 prediction 0.661297737540146 Functional Loss - PIGF ENSG00000151665 CDS Human protein_coding chr2:46808689 chr2:46808686 synonymous SNV . 0 24 hm5C_associated_SNPs_51098 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:46808650-46808709
64251 chr6 43033394 43033394 1 + G T COAD 43033391 + 43033371 43033411 41 GCGATGCCACCAAGGATTCCCTGGATGACCTCTTTCCTAAT GCGATGCCACCAAGGATTCCCTGTATGACCTCTTTCCTAAT < 41bp 0.853123935245419 0.522489636407652 0.8463761 0.34402496 prediction 0.661268597675533 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43033391 chr6:43033394 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51101 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:43033385-43033412
64251 chr6 33365901 33365901 1 + G T SARC 33365898 + 33365878 33365918 41 CCTCTCTCAGGAAGCAGACTCAAGAGGAGGCCTGACCAGAT CCTCTCTCAGGAAGCAGACTCAATAGGAGGCCTGACCAGAT < 41bp 0.860346488522134 0.529746489368771 0.8265374 0.1748004 prediction 0.661199998306726 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33365898 chr6:33365901 nonsynonymous SNV 0.901 2 24 hm5C_associated_SNPs_51103 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:33365898-33365929
64251 chr8 27361273 27361273 1 + G T BLCA 27361270 + 27361250 27361290 41 CTCCAGGCAGCTCTCATGCTCAGGAAGAAAGGTAAGGATCT CTCCAGGCAGCTCTCATGCTCAGTAAGAAAGGTAAGGATCT < 41bp 0.83057261441281 0.46964456544576 0.88242954 0.19797063 prediction 0.66114522882562 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27361270 chr8:27361273 nonsynonymous SNV 0.322 3 24 hm5C_associated_SNPs_51105 0 0 2 PPIG POSTAR2 ENCODE chr8:27361251-27361276
64251 chr2 207652825 207652825 1 + G T LUAD 207652822 + 207652802 207652842 41 CAGAGGTGCTGAGCAGCCTTCTGGGAGGTGAAGGACACTTC CAGAGGTGCTGAGCAGCCTTCTGTGAGGTGAAGGACACTTC < 41bp 0.830561169826194 0.486923958995842 0.8409128 0.34250677 prediction 0.661122339652388 Functional Loss - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207652822 chr2:207652825 stopgain 0.173 0 24 hm5C_associated_SNPs_51108 0 0 3 FXR2 POSTAR2 ENCODE chr2:207652782-207652861
64251 chr4 20620619 20620619 1 + G T HNSC 20620616 + 20620596 20620636 41 AGTGGTGAAGTGCGGCTGTACGAGGTGTGTGTCCTAAACAC AGTGGTGAAGTGCGGCTGTACGATGTGTGTGTCCTAAACAC < 41bp 0.842296825291779 0.511751764680885 0.89647436 0.28123602 prediction 0.661090121221786 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20620616 chr4:20620619 nonsynonymous SNV 0.093 2 24 hm5C_associated_SNPs_51109 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:20620600-20620620
64251 chr15 22848987 22848987 1 + G T UCEC 22848984 + 22848964 22849004 41 CAGTTCTGAGAGCATGCTGCCTGGAAGTGGGTCTGTTCCTA CAGTTCTGAGAGCATGCTGCCTGTAAGTGGGTCTGTTCCTA < 41bp 0.830527827390996 0.478847539764778 0.1674768 0.06875217 prediction 0.661055654781992 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22848984 chr15:22848987 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_51112 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:22848949-22848987
64251 chr5 133707328 133707328 1 + G T SARC 133707325 + 133707305 133707345 41 AGGAGGCTCATGCGGGATTTCAAGCGGTAAGGGCCTTCACC AGGAGGCTCATGCGGGATTTCAATCGGTAAGGGCCTTCACC < 41bp 0.843998813070271 0.513565661961082 0.9288691 0.7678269 prediction 0.660866302218378 Functional Loss - UBE2B ENSG00000119048 CDS Human protein_coding chr5:133707325 chr5:133707328 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_51117 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:133707304-133707328
64251 chr17 46025106 46025106 1 + G T rs189494213 46025103 + 46025083 46025123 41 TGGGGTTTCACCATGTTGGCCAGGATTGTCTCCATCTCTTG TGGGGTTTCACCATGTTGGCCAGTATTGTCTCCATCTCTTG < 41bp 0.830299863376706 0.484876527286216 0.7768671 0.03813237 prediction 0.660599726753412 Functional Loss - PNPO ENSG00000263798;ENSG00000264019 ncRNA_intronic Human other chr17:46025103 chr17:46025106 . . 0 24 hm5C_associated_SNPs_51122 1 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:46025098-46025141
64251 chr1 44435983 44435983 1 + G T LUSC 44435980 + 44435960 44436000 41 TCGCTGGATTTGTCCGCGACCTGGGGTGTGAACGAGTGAGG TCGCTGGATTTGTCCGCGACCTGTGGTGTGAACGAGTGAGG < 41bp 0.848139177413765 0.517860271433374 0.7622833 0.1114105 prediction 0.660557811960781 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44435980 chr1:44435983 nonsynonymous SNV 0.693 1 24 hm5C_associated_SNPs_51123 0 0 3 BUD13 POSTAR2 ENCODE chr1:44435983-44436065
64251 chrX 21875401 21875401 1 + G T LGG 21875398 + 21875378 21875418 41 GCGGCTGCGAAAAGATGTTCCGGGATTACGCCGCCATGAGA GCGGCTGCGAAAAGATGTTCCGGTATTACGCCGCCATGAGA < 41bp 0.83027670040076 0.481124876737077 0.8970252 0.34388062 prediction 0.660553400801519 Functional Loss - YY2 ENSG00000230797 CDS Human protein_coding chrX:21875398 chrX:21875401 nonsynonymous SNV 0.205 2 24 hm5C_associated_SNPs_51124 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chrX:21875387-21875413
64251 chr19 36120133 36120133 1 + G T LIHC 36120130 + 36120110 36120150 41 CCGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGA CCGGGTCCTGGCGCTGGCATCCCTGGCAAAAGCGGCGAGGA < 41bp 0.848743588698762 0.518532062049262 0.8625793 0.19327053 prediction 0.660423053299 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120130 chr19:36120133 synonymous SNV . 0 24 hm5C_associated_SNPs_51128 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36120099-36120133
64251 chrX 102884976 102884976 1 + G T LUSC 102884973 + 102884953 102884993 41 CAGTCTTCGGAGGAGCAGTCCTCGGAGGAGGAGTTCTTTCC CAGTCTTCGGAGGAGCAGTCCTCTGAGGAGGAGTTCTTTCC < 41bp 0.859613794062138 0.529408160116336 0.45565963 0.74772024 prediction 0.660411267891603 Functional Loss - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102884973 chrX:102884976 synonymous SNV . 0 24 hm5C_associated_SNPs_51129 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102884938-102884985
64251 chr1 117603109 117603109 1 + G T LUSC 117603106 + 117603086 117603126 41 GCTTTCTTAAGACCGGCGTCCGCGATGGCCCGAATAAAGGA GCTTTCTTAAGACCGGCGTCCGCTATGGCCCGAATAAAGGA < 41bp 0.841818272069544 0.511640721279914 0.17899823 0.09145576 prediction 0.660355101579261 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117603106 chr1:117603109 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51130 0 0 6 BUD13 POSTAR2 ENCODE chr1:117603067-117603114
64251 chr1 215781456 215781456 1 + G T GBM 215781453 + 215781433 215781473 41 TCTACTCCTTTAGCGTCATTCAAGATACTATCCCTGGAGGA TCTACTCCTTTAGCGTCATTCAATATACTATCCCTGGAGGA < 41bp 0.847859034464036 0.517694158560418 0.36717764 0.2775575 prediction 0.660329751807236 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215781453 chr1:215781456 nonsynonymous SNV 0.989 2 24 hm5C_associated_SNPs_51132 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:215781379-215781469
64251 chr2 48018102 48018102 1 + G T UCEC 48018099 + 48018079 48018119 41 CCAGGAGATTTGGTTTGGGCCAAGATGGAGGGTTACCCCTG CCAGGAGATTTGGTTTGGGCCAATATGGAGGGTTACCCCTG < 41bp 0.852046216513594 0.522010044078551 0.733453 0.4444609 prediction 0.660072344870085 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48018099 chr2:48018102 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51143 1 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:48018066-48018102
64251 chr22 35811893 35811893 1 + G T UCEC 35811890 + 35811870 35811910 41 GTGATGAGGGACCCTTCGTCCCGGAATTTCATCATGGAGGG GTGATGAGGGACCCTTCGTCCCGTAATTTCATCATGGAGGG < 41bp 0.829975676108678 0.469322350346086 0.40385413 0.2085802 prediction 0.659951352217355 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811890 chr22:35811893 synonymous SNV . 0 24 hm5C_associated_SNPs_51146 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr22:35811893-35811915
64251 chr1 68152224 68152224 1 + G T LUAD 68152221 + 68152201 68152241 41 GACCGACGCTGGCCCCGCGGCGAGCGAGGGCGCCGAGCAGC GACCGACGCTGGCCCCGCGGCGATCGAGGGCGCCGAGCAGC < 41bp 0.829931765195639 0.475381564704003 0.6008656 0.19191062 prediction 0.659863530391279 Functional Loss - GADD45A ENSG00000116717 CDS Human protein_coding chr1:68152221 chr1:68152224 nonsynonymous SNV 0.836 0 24 hm5C_associated_SNPs_51148 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:68152220-68152252
64251 chr2 15753382 15753382 1 + G T LUAD 15753379 + 15753359 15753399 41 TAATTGGAGGTGTTGCAGCCCGGGATCAGCTCTCTGTTTTG TAATTGGAGGTGTTGCAGCCCGGTATCAGCTCTCTGTTTTG < 41bp 0.856894985298721 0.527021956578831 0.88954395 0.28210002 prediction 0.659746057439779 Functional Loss - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15753379 chr2:15753382 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_51150 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr2:15753360-15753397
64251 chrX 49105127 49105127 1 + G T UCEC 49105124 + 49105104 49105144 41 CTCGACGGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTC CTCGACGGCTGGCAGAGATCCAATAACTGCACCAGAGTGTC < 41bp 0.829863738407102 0.466824959405033 0.82216287 0.2891516 prediction 0.659727476814205 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49105124 chrX:49105127 stopgain 0.998 0 24 hm5C_associated_SNPs_51151 0 0 1 DDX24 POSTAR2 ENCODE chrX:49105093-49105133
64251 chr16 90106785 90106785 1 + G T UCEC 90106782 + 90106762 90106802 41 GTGCAGCAGAAGACAGGGTTCAAGAACCTCGTGCTAGAACG GTGCAGCAGAAGACAGGGTTCAATAACCTCGTGCTAGAACG < 41bp 0.829847102295076 0.477554637082747 0.28912878 0.2540608 prediction 0.659694204590153 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90106782 chr16:90106785 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51154 0 0 3 BUD13 POSTAR2 ENCODE chr16:90106653-90106787
64251 chr15 40683726 40683726 1 + G T COAD 40683723 + 40683703 40683743 41 GTGAGACCCTGGCATCACGACAAGAATCCACTACTGATCAC GTGAGACCCTGGCATCACGACAATAATCCACTACTGATCAC < 41bp 0.829840846058682 0.480701962977911 0.28699666 0.22636554 prediction 0.659681692117364 Functional Loss - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40683723 chr15:40683726 stopgain 0.114 0 24 hm5C_associated_SNPs_51155 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:40683678-40683734
64251 chr15 66180086 66180086 1 + A C UCEC 66180082 + 66180062 66180102 41 AAGCAAATGTCAGACAGACGCGAAAATGACATGTCTCCAAG AAGCAAATGTCAGACAGACGCGAACATGACATGTCTCCAAG < 41bp 0.854262706468102 0.524451878640269 0.28481486 0.1770828 prediction 0.659621655655666 Functional Loss - RAB11A ENSG00000103769 CDS Human protein_coding chr15:66180082 chr15:66180086 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51157 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:66180044-66180235
64251 chr6 116720707 116720707 1 + G T BLCA 116720704 + 116720684 116720724 41 CCCAAGGACTACAGTGCCCGCTGGAATGAAATTTTTGGAAA CCCAAGGACTACAGTGCCCGCTGTAATGAAATTTTTGGAAA < 41bp 0.831108363122894 0.501367244801441 0.25685608 0.1528 prediction 0.659482236642905 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116720704 chr6:116720707 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51159 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:116720700-116720720
64251 chr2 7160760 7160760 1 + G T LUSC 7160757 + 7160737 7160777 41 CTGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGA CTGCAAAGCCAGCTGGCACCCTGTCCAGGGCTGCCCGGAGA < 41bp 0.829714976874852 0.478524724487731 0.1189723 0.16828421 prediction 0.659429953749704 Functional Loss - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7160757 chr2:7160760 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51160 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:7160726-7160760
64251 chr17 73811302 73811302 1 + G T BLCA 73811299 + 73811279 73811319 41 GCAGCAGTCGGGCAGCTGTCCCCGAGGACCCTTCTGCGCCT GCAGCAGTCGGGCAGCTGTCCCCTAGGACCCTTCTGCGCCT < 41bp 0.829687753747681 0.464200902191967 0.38804668 0.051997215 prediction 0.659375507495362 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73811299 chr17:73811302 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51163 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:73811296-73811322
64251 chr7 143079497 143079497 1 + A C rs566953376 143079493 + 143079473 143079513 41 TCCCTTCCCCGCCGCCTCCTCCGGAGGAGGAGGGAGGGCCT TCCCTTCCCCGCCGCCTCCTCCGGCGGAGGAGGGAGGGCCT < 41bp 0.860379970405099 0.53072240846659 0.88945806 0.8742155 prediction 0.659315123877017 Functional Loss - ZYX ENSG00000159840 CDS Human protein_coding chr7:143079493 chr7:143079497 nonsynonymous SNV 0.029 0 25 hm5C_associated_SNPs_51164 0 0 5 DDX6 POSTAR2 ENCODE chr7:143079478-143079538
64251 chr9 124094780 124094780 1 + G T PRAD 124094777 + 124094757 124094797 41 CGCCCATCACCGTGGTGAAGCAAGGCTTTGAGCCTCCCTCC CGCCCATCACCGTGGTGAAGCAATGCTTTGAGCCTCCCTCC < 41bp 0.829645791685991 0.483514051225361 0.85107255 0.19990483 prediction 0.659291583371982 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124094777 chr9:124094780 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_51166 0 0 2 SND1 POSTAR2 ENCODE chr9:124094712-124094782
64251 chr7 75933446 75933446 1 + G T LUAD 75933443 + 75933423 75933463 41 CCTTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCA CCTTCGAGTCGCGGGCCCAGCTTTGGGGCCCAGAAGCTGCA < 41bp 0.829630519396704 0.482330988412812 0.1209515 0.03204325 prediction 0.659261038793409 Functional Loss - HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933443 chr7:75933446 nonsynonymous SNV 0.837 4 24 hm5C_associated_SNPs_51167 1 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr5 140800954 140800954 1 + G T STAD 140800951 + 140800931 140800971 41 TGGGCAATATCTCCAAGGACCTGGGGCTGGAGCCCCGGGAG TGGGCAATATCTCCAAGGACCTGTGGCTGGAGCCCCGGGAG < 41bp 0.829607924303699 0.458633376350549 0.9214152 0.3383261 prediction 0.659215848607397 Functional Loss - PCDHGA11 ENSG00000253873 CDS Human protein_coding chr5:140800951 chr5:140800954 nonsynonymous SNV 0.888 3 24 hm5C_associated_SNPs_51171 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:140800918-140800956
64251 chr9 104170256 104170256 1 + A C UCEC 104170252 + 104170232 104170272 41 ATGAGGAGCCAACTGTAAAACAAGAGATTGAAGAAATTGAG ATGAGGAGCCAACTGTAAAACAAGCGATTGAAGAAATTGAG < 41bp 0.850132533174921 0.520592251921558 0.2768671 0.24376926 prediction 0.659080562506726 Functional Loss - ZNF189 ENSG00000136870 CDS Human protein_coding chr9:104170252 chr9:104170256 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51173 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:104170202-104170288
64251 chr10 105184934 105184934 1 + G T LUAD 105184931 + 105184911 105184951 41 AACCCTCAAGACCACAGAACCAGGAGTGACTGGCCTTCTTT AACCCTCAAGACCACAGAACCAGTAGTGACTGGCCTTCTTT < 41bp 0.829530887340419 0.487196204988121 0.9421598 0.90178907 prediction 0.659061774680838 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105184931 chr10:105184934 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_51174 0 0 1 GEMIN5 POSTAR2 ENCODE chr10:105184902-105184978
64251 chr1 110882461 110882461 1 + G T LUSC 110882458 + 110882438 110882478 41 GGGCGAATCGCGCAGCAGCTCCCGGGGTGGAGGCGGGGAGT GGGCGAATCGCGCAGCAGCTCCCTGGGTGGAGGCGGGGAGT < 41bp 0.849705308220504 0.520260914947909 0.588428 0.31624907 prediction 0.658888786545191 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882458 chr1:110882461 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_51178 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:110882452-110882475
64251 chr12 54925582 54925582 1 + G T LUAD 54925579 + 54925559 54925599 41 ATTGGGGTTATCCTCAGTTTCAGGGCCATGGCCCAAGAGGG ATTGGGGTTATCCTCAGTTTCAGTGCCATGGCCCAAGAGGG < 41bp 0.829375351603362 0.455955569237669 0.92176497 0.2137138 prediction 0.658750703206724 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54925579 chr12:54925582 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_51187 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:54925573-54925597
64251 chr1 146757092 146757092 1 + A C rs13374920 146757088 + 146757068 146757108 41 AGGACAGACAGAAGAAAAGACAAGAAGCAGCTGCCAAGAGA AGGACAGACAGAAGAAAAGACAAGCAGCAGCTGCCAAGAGA < 41bp 0.829338526074728 0.457142992609849 0.44332916 0.24504843 prediction 0.658677052149456 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146757088 chr1:146757092 nonsynonymous SNV 0.500 0 25 hm5C_associated_SNPs_51190 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:146757073-146757094
64251 chr10 28971216 28971216 1 + G T COAD 28971213 + 28971193 28971233 41 ATGGTGCCGGTCAGTGGGCACGAGAACTGCTGTCTGACCTG ATGGTGCCGGTCAGTGGGCACGATAACTGCTGTCTGACCTG < 41bp 0.858201506637069 0.528886181736885 0.7988736 0.16349033 prediction 0.658630649800369 Functional Loss - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971213 chr10:28971216 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51192 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr10:28971186-28971217
64251 chr7 144062339 144062339 1 + G T UCEC 144062336 + 144062316 144062356 41 CCCCCATTGCCCCCAAAGTCCAGGGGGAGGAGCAGGAGCAC CCCCCATTGCCCCCAAAGTCCAGTGGGAGGAGCAGGAGCAC < 41bp 0.829292245812079 0.475521220093545 0.85664153 0.4738607 prediction 0.658584491624158 Functional Loss - ARHGEF5 ENSG00000050327 CDS Human protein_coding chr7:144062336 chr7:144062339 nonsynonymous SNV 0.349 1 24 hm5C_associated_SNPs_51193 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:144062339-144062379
64251 chr19 9270988 9270988 1 + G T UCEC 9270985 + 9270965 9271005 41 TGTACGACGGGAGAAAAATGCATGAATGTCATCAGTGCCAA TGTACGACGGGAGAAAAATGCATTAATGTCATCAGTGCCAA < 41bp 0.829278699804525 0.48708743791159 0.3994166 0.24204707 prediction 0.65855739960905 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9270985 chr19:9270988 stopgain 0.970 0 24 hm5C_associated_SNPs_51195 0 0 1 YBX3 POSTAR2 ENCODE chr19:9270982-9271001
64251 chr19 41765620 41765620 1 + A C OV 41765616 + 41765596 41765636 41 GGATGAGGGTGGAGGTTATCCTGAACCCCCTGGAGCTGCAG GGATGAGGGTGGAGGTTATCCTGACCCCCCTGGAGCTGCAG < 41bp 0.829267720936885 0.454215597501319 0.30407315 0.3305102 prediction 0.65853544187377 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41765616 chr19:41765620 nonsynonymous SNV 0.334 2 25 hm5C_associated_SNPs_51197 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409655 chr19:41765580-41765620
64251 chr19 10221814 10221814 1 + G T LUAD 10221811 + 10221791 10221831 41 GATGGTGGGCGAGGCCGGGGCCGGGGCCGCCCAGGGAAGAG GATGGTGGGCGAGGCCGGGGCCGTGGCCGCCCAGGGAAGAG < 41bp 0.829179218755862 0.471074789029722 0.90143555 0.72365457 prediction 0.658358437511725 Functional Loss - PPAN ENSG00000130810 CDS Human protein_coding chr19:10221811 chr19:10221814 synonymous SNV . 0 24 hm5C_associated_SNPs_51200 0 0 17 AARS POSTAR2 ENCODE chr19:10221776-10221889
64251 chr1 215777496 215777496 1 + G T UCEC 215777493 + 215777473 215777513 41 GGTGTCAGTGGTAACTGGATCGAGATCGCCTATGGTACGAG GGTGTCAGTGGTAACTGGATCGATATCGCCTATGGTACGAG < 41bp 0.829163486766588 0.47464832356766 0.5308238 0.061992496 prediction 0.658326973533176 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215777493 chr1:215777496 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51202 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:215777458-215777521
64251 chr6 26020768 26020768 1 + A C rs145452674 26020764 + 26020744 26020784 41 GAAGTCTACTGGTGGCAAGGCGCCACGCAAACAGTTGGCCA GAAGTCTACTGGTGGCAAGGCGCCCCGCAAACAGTTGGCCA < 41bp 0.858182656785059 0.529033543643952 0.15862176 0.123363584 prediction 0.658298226282214 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020764 chr6:26020768 synonymous SNV . 0 25 hm5C_associated_SNPs_51203 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr6:26020747-26020770
64251 chr1 33237908 33237908 1 + G T BLCA 33237905 + 33237885 33237925 41 ACCCGCCTCCCCCAGTTACCCTCGAGCTGAGCCCCTTACTG ACCCGCCTCCCCCAGTTACCCTCTAGCTGAGCCCCTTACTG < 41bp 0.842048608801843 0.51291348698446 0.46456853 0.3487857 prediction 0.658270243634765 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237905 chr1:33237908 nonsynonymous SNV 0.273 1 24 hm5C_associated_SNPs_51204 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:33237889-33237912
64251 chrX 48434708 48434708 1 + G T LUSC 48434705 + 48434685 48434725 41 GTGTCTCCCACACTTAGTCTCTGGATGGTCGTCAGATCCGT GTGTCTCCCACACTTAGTCTCTGTATGGTCGTCAGATCCGT < 41bp 0.861132738869139 0.532011122813858 0.34900206 0.18291476 prediction 0.658243232110562 Functional Loss - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48434705 chrX:48434708 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_51205 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:48434650-48434736
64251 chr12 121003261 121003261 1 + A C LUSC 121003257 + 121003237 121003277 41 TTGAGAAGAGGAAACGTCAGCGCCAAAAGAAGGCTCGGGAG TTGAGAAGAGGAAACGTCAGCGCCCAAAGAAGGCTCGGGAG < 41bp 0.829088661934717 0.430576249268009 0.19192171 0.0921886 prediction 0.658177323869433 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121003257 chr12:121003261 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_51207 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:121003234-121003261
64251 chr20 32336861 32336861 1 + G T LUSC 32336858 + 32336838 32336878 41 CCCTGGACCAGCCCATGCCCCAGGGCCCCCCACCTGTGCAG CCCTGGACCAGCCCATGCCCCAGTGCCCCCCACCTGTGCAG < 41bp 0.829074490132655 0.449392724939814 0.86544704 0.10280812 prediction 0.65814898026531 Functional Loss - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32336858 chr20:32336861 nonsynonymous SNV 0.762 2 24 hm5C_associated_SNPs_51209 0 0 1 PRPF8 POSTAR2 ENCODE chr20:32336839-32336900
64251 chr9 38397105 38397105 1 + G T UCEC 38397102 + 38397082 38397122 41 CGGCTGTGTTCACCCGGGATCTGGACAAGGCCATGTACTTC CGGCTGTGTTCACCCGGGATCTGTACAAGGCCATGTACTTC < 41bp 0.853726388600621 0.524653109807558 0.3385222 0.19184554 prediction 0.658146557586127 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38397102 chr9:38397105 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51210 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:38397078-38397143
64251 chr9 15458012 15458012 1 + G T UCEC 15458009 + 15457989 15458029 41 ACATTGTATCCCCTCCTTATCAAGAAGCATTGGCTATGGAC ACATTGTATCCCCTCCTTATCAATAAGCATTGGCTATGGAC < 41bp 0.829040211352965 0.486958432391135 0.91657853 0.07789469 prediction 0.658080422705929 Functional Loss - SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15458009 chr9:15458012 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_51213 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr9:15457988-15458025
64251 chr6 83869559 83869559 1 + G T UCEC 83869556 + 83869536 83869576 41 TGGTCTGGAGACAACGTACACAGGAGGTAATGGCTTCTCTA TGGTCTGGAGACAACGTACACAGTAGGTAATGGCTTCTCTA < 41bp 0.839968352423228 0.510930544144778 0.891704 0.25394446 prediction 0.658075616556899 Functional Loss - DOPEY1 ENSG00000083097 CDS Human protein_coding chr6:83869556 chr6:83869559 nonsynonymous SNV 0.955 3 24 hm5C_associated_SNPs_51214 0 0 1 BUD13 POSTAR2 ENCODE chr6:83869489-83869570
64251 chr3 50095301 50095301 1 + G T UCEC 50095298 + 50095278 50095318 41 CCAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGGACAT CCAGGAAGAGGGAAGAAGGCCAATAGTCACGCTTAGGACAT < 41bp 0.845685211210845 0.51669540091081 0.26295474 0.10535443 prediction 0.657979620600071 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50095298 chr3:50095301 stopgain 0.830 0 24 hm5C_associated_SNPs_51216 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:50095300-50095320
64251 chr6 27219637 27219637 1 + G T PAAD 27219634 + 27219614 27219654 41 AGCTGAGCGCTTGCGGGCCCCTGGGCCGCGCTGAAAACCAG AGCTGAGCGCTTGCGGGCCCCTGTGCCGCGCTGAAAACCAG < 41bp 0.860278098018128 0.53131023632994 0.8925743 0.40672693 prediction 0.657935723376377 Functional Loss - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27219634 chr6:27219637 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_51218 0 0 1 DDX6 POSTAR2 ENCODE chr6:27219575-27219680
64251 chr6 44397592 44397592 1 + G T LUSC 44397589 + 44397569 44397609 41 TCCTGGGCAGAGCCGCTACACACGGGCCAATCTGGCTAGTA TCCTGGGCAGAGCCGCTACACACTGGCCAATCTGGCTAGTA < 41bp 0.828953876011776 0.482425568730675 0.4043798 0.20916855 prediction 0.657907752023552 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44397589 chr6:44397592 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_51221 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44397527-44397600
64251 chr22 44332974 44332974 1 + A C rs78730442 44332970 + 44332950 44332990 41 GCCAGGCCTGAAGTCATCCTCAGAAGGGATGGATCCTGAGG GCCAGGCCTGAAGTCATCCTCAGACGGGATGGATCCTGAGG < 41bp 0.867923541115237 0.53898841469543 0.9071667 0.86238515 prediction 0.657870252839613 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332970 chr22:44332974 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_51223 0 0 3 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr16 68941453 68941453 1 + G T LUAD 68941450 + 68941430 68941470 41 CTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATCTTCT CTGCCAGGAATGCGGTTTGGCAGTAGACTTCTTCATCTTCT < 41bp 0.828922779989372 0.47568908706046 0.4997195 0.033783913 prediction 0.657845559978744 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68941450 chr16:68941453 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51224 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:68941437-68941464
64251 chr1 226016494 226016494 1 + G T COAD 226016491 + 226016471 226016511 41 CCATCTACTGGTTCATCTCCCGGGACAAAGAGGAAACTTTG CCATCTACTGGTTCATCTCCCGGTACAAAGAGGAAACTTTG < 41bp 0.86112643368777 0.532272283956537 0.8991422 0.71715826 prediction 0.657708299462467 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016491 chr1:226016494 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_51230 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:226016461-226016499
64251 chr9 129642663 129642663 1 + G T rs141877075 129642660 + 129642640 129642680 41 GAGGGCGTGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTG GAGGGCGTGCCCGCCAGAAGCGGTCTTTGTCTGTCCACCTG < 41bp 0.866835405953101 0.537982462989319 0.9107835 0.5073982 prediction 0.657705885927564 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642660 chr9:129642663 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_51231 0 0 2 RBM15 POSTAR2 ENCODE chr9:129642630-129642678
64251 chrX 149905241 149905241 1 + G T UCEC 149905238 + 149905218 149905258 41 ATGTGGATGGGACGCATTGGCTGGAATATATAAGGGTAAAG ATGTGGATGGGACGCATTGGCTGTAATATATAAGGGTAAAG < 41bp 0.844132335204822 0.51530337715246 0.2718558 0.06448099 prediction 0.657657916104724 Functional Loss - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905238 chrX:149905241 stopgain 0.997 1 24 hm5C_associated_SNPs_51233 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chrX:149905223-149905241
64251 chr17 7466910 7466910 1 + G T SARC 7466907 + 7466887 7466927 41 AGAACCATCTTTCACCCCAGCAAGGGGGTGCGACGCCACAG AGAACCATCTTTCACCCCAGCAATGGGGTGCGACGCCACAG < 41bp 0.828796093244722 0.480102883763893 0.6757158 0.14704108 prediction 0.657592186489444 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466907 chr17:7466910 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_51234 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:7466906-7466930
64251 chr6 25983666 25983666 1 + G T UCEC 25983663 + 25983643 25983683 41 CAAGAGCCTCAGTCTGGATTCTGGACCCTCAGGCTGTGCAA CAAGAGCCTCAGTCTGGATTCTGTACCCTCAGGCTGTGCAA < 41bp 0.828769007376035 0.482995716586754 0.48232794 0.23340443 prediction 0.65753801475207 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983663 chr6:25983666 nonsynonymous SNV 0.381 4 24 hm5C_associated_SNPs_51236 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:25983622-25983683
64251 chrX 75396788 75396788 1 + G T LUAD 75396785 + 75396765 75396805 41 ACTATGGTACTTTGCTGCGACTAGATTGTTCTCAGGGCTAC ACTATGGTACTTTGCTGCGACTATATTGTTCTCAGGGCTAC < 41bp 0.828767739045905 0.492687872904058 0.046841472 0.05348462 prediction 0.65753547809181 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75396785 chrX:75396788 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51237 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chrX:75396756-75396794
64251 chr17 40937377 40937377 1 + G T HNSC 40937375 + 40937355 40937395 41 AGGAGGACGACGGCGAGAAGCCGGGCCTCAAGCTCTGGCTG AGGAGGACGACGGCGAGAAGCCTGGCCTCAAGCTCTGGCTG < 41bp 0.828757169896995 0.488826521638487 0.9045868 0.5694679 prediction 0.65751433979399 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40937375 chr17:40937377 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_51238 0 0 5 BUD13 POSTAR2 ENCODE chr17:40937332-40937397
64251 chr22 40804304 40804304 1 + G T UCEC 40804301 + 40804281 40804321 41 TACTCCATCGCGGGGGATGACTCGGTGACGGAGGGGGTCAC TACTCCATCGCGGGGGATGACTCTGTGACGGAGGGGGTCAC < 41bp 0.828727446170951 0.480836421085116 0.49847066 0.40203184 prediction 0.657454892341903 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40804301 chr22:40804304 synonymous SNV . 0 24 hm5C_associated_SNPs_51241 0 0 4 DDX24 POSTAR2 ENCODE chr22:40804288-40804318
64251 chr17 17699150 17699150 1 + G T LUAD 17699147 + 17699127 17699167 41 GCCTGATGGGGAGCGAGCTCCAGGGGATTCCACCACCTCGG GCCTGATGGGGAGCGAGCTCCAGTGGATTCCACCACCTCGG < 41bp 0.828691890727281 0.468030777348028 0.93590313 0.77904594 prediction 0.657383781454562 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17699147 chr17:17699150 nonsynonymous SNV 0.078 1 24 hm5C_associated_SNPs_51245 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17699140-17699160
64251 chr2 187455108 187455108 1 + G T LUAD 187455105 + 187455085 187455125 41 GACGGCTGCGCCTCGGTCCCCGCGGCCTCCCGCTTCTTCTC GACGGCTGCGCCTCGGTCCCCGCTGCCTCCCGCTTCTTCTC < 41bp 0.828659455504837 0.490662188055098 0.92944777 0.36606202 prediction 0.657318911009674 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187455105 chr2:187455108 nonsynonymous SNV 0.106 2 24 hm5C_associated_SNPs_51246 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:187455094-187455136
64251 chr11 74914356 74914356 1 + G T UCEC 74914353 + 74914333 74914373 41 TGAGCACCACCTCCCTCAGCCTGGATGCCCAGCCCCGTGAT TGAGCACCACCTCCCTCAGCCTGTATGCCCAGCCCCGTGAT < 41bp 0.828659301584683 0.474704595824016 0.40572304 0.16554835 prediction 0.657318603169365 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74914353 chr11:74914356 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51247 0 0 2 BUD13 POSTAR2 ENCODE chr11:74914328-74914378
64251 chrX 102885205 102885205 1 + A C UCEC 102885201 + 102885181 102885221 41 TTTAGAGGGGACATACATGGCAGAAATTTAAGCAATGAGGA TTTAGAGGGGACATACATGGCAGACATTTAAGCAATGAGGA < 41bp 0.828650417004165 0.46435788474675 0.1304686 0.15502667 prediction 0.65730083400833 Functional Loss - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102885201 chrX:102885205 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_51248 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102885181-102885206
64251 chr1 174973839 174973839 1 + G T LUAD 174973836 + 174973816 174973856 41 GCCCTTACAGCTGAAAAATCCAAGATTGAGACAGAAATCAA GCCCTTACAGCTGAAAAATCCAATATTGAGACAGAAATCAA < 41bp 0.828646327089149 0.489825576563885 0.17731625 0.10494137 prediction 0.657292654178298 Functional Loss - CACYBP ENSG00000116161 CDS Human protein_coding chr1:174973836 chr1:174973839 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_51250 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:174973785-174973899
64251 chr19 10221461 10221461 1 + G T STAD 10221458 + 10221438 10221478 41 TCCCTTCAAGGACGGCGAGCCTGGAGTTGGGTGAGGACGAT TCCCTTCAAGGACGGCGAGCCTGTAGTTGGGTGAGGACGAT < 41bp 0.828590416358828 0.475942073315535 0.44165725 0.08330473 prediction 0.657180832717656 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10221458 chr19:10221461 stopgain 0.000 0 24 hm5C_associated_SNPs_51253 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10221444-10221467
64251 chr19 44570917 44570917 1 + A C rs143104475 44570913 + 44570893 44570933 41 TAGGCATTGTGTGGTCCACACAGGAAAGAAACCAAACAGCA TAGGCATTGTGTGGTCCACACAGGCAAGAAACCAAACAGCA < 41bp 0.828515508119893 0.452444678272768 0.5363779 0.4307324 prediction 0.657031016239786 Functional Loss - ZNF223 ENSG00000178386;ENSG00000267022 CDS Human other chr19:44570913 chr19:44570917 synonymous SNV . 0 25 hm5C_associated_SNPs_51260 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr19:44570890-44570931
64251 chr6 36179103 36179103 1 + G T ACC 36179100 + 36179080 36179120 41 AGGTGCAGCTGAAGGAGCTGCTGGAGAAACTGGACCTGGTG AGGTGCAGCTGAAGGAGCTGCTGTAGAAACTGGACCTGGTG < 41bp 0.852238997365077 0.523760869201272 0.7614774 0.47738314 prediction 0.65695625632761 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36179100 chr6:36179103 stopgain 1.000 1 24 hm5C_associated_SNPs_51262 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:36179099-36179118
64251 chr17 42429421 42429421 1 + G T PAAD 42429419 + 42429399 42429439 41 ACCACCAGCACTGCTGCCCCCAGGGCTACACGTGTGTAGCT ACCACCAGCACTGCTGCCCCCATGGCTACACGTGTGTAGCT < 41bp 0.828473277990369 0.497134075763536 0.8763882 0.14197937 prediction 0.656946555980737 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42429419 chr17:42429421 nonsynonymous SNV 0.726 0 23 hm5C_associated_SNPs_51263 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:42429420-42429421
64251 chr20 31424572 31424572 1 + G T UCEC 31424569 + 31424549 31424589 41 CTGTGGCTGCCAGACAAGGTCAAGAAACTGCAGTGGCTCCT CTGTGGCTGCCAGACAAGGTCAATAAACTGCAGTGGCTCCT < 41bp 0.828448476625737 0.48788156888882 0.7741688 0.28834414 prediction 0.656896953251474 Functional Loss - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31424569 chr20:31424572 stopgain 1.000 1 24 hm5C_associated_SNPs_51266 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:31424560-31424580
64251 chr17 15878047 15878047 1 + G T LIHC 15878044 + 15878024 15878064 41 AGAGGGGTCATTGCTGTCCTCTGGGTCCTTGCCTTTGGCAT AGAGGGGTCATTGCTGTCCTCTGTGTCCTTGCCTTTGGCAT < 41bp 0.828411394779657 0.487942567238737 0.51813436 0.09032273 prediction 0.656822789559315 Functional Loss - ADORA2B ENSG00000170425 CDS Human protein_coding chr17:15878044 chr17:15878047 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51269 0 0 1 DDX3X POSTAR2 ENCODE chr17:15878044-15878138
64251 chr16 84801883 84801883 1 + G T UCEC 84801880 + 84801860 84801900 41 CAGTTGGATATCCAGTCAGACAAGATACGCACAGTCCAGGA CAGTTGGATATCCAGTCAGACAATATACGCACAGTCCAGGA < 41bp 0.828406656602385 0.477208978224267 0.32709044 0.10952571 prediction 0.656813313204769 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84801880 chr16:84801883 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_51270 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:84801842-84801899
64251 chr4 57891066 57891066 1 + G T LUAD 57891063 + 57891043 57891083 41 TTTTAAAAGGTATCGGCTAACAAGGGTGAAATTGGTGATGC TTTTAAAAGGTATCGGCTAACAATGGTGAAATTGGTGATGC < 41bp 0.83969424102254 0.511338185955344 0.9201225 0.2085582 prediction 0.656712110134392 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57891063 chr4:57891066 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_51274 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr4:57891059-57891097
64251 chr12 132195840 132195840 1 + G T LUAD 132195837 + 132195817 132195857 41 AGCGGCGCGAAGGAGGAGGCCGGGCCAGGCGGTGCCGGCGG AGCGGCGCGAAGGAGGAGGCCGGTCCAGGCGGTGCCGGCGG < 41bp 0.833625779289178 0.505303313103551 0.8991662 0.83964896 prediction 0.656644932371253 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132195837 chr12:132195840 synonymous SNV . 0 24 hm5C_associated_SNPs_51276 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132195835-132195859
64251 chr19 17534842 17534842 1 + A C LUSC 17534838 + 17534818 17534858 41 TGGATGGGGTTCCCTTCACACTCCACCCACGATTTGAGGGC TGGATGGGGTTCCCTTCACACTCCCCCCACGATTTGAGGGC < 41bp 0.828312514877701 0.420079049257525 0.89443505 0.08974442 prediction 0.656625029755401 Functional Loss - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17534838 chr19:17534842 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_51278 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17534826-17534853
64251 chr19 14581102 14581102 1 + G T UCEC 14581099 + 14581079 14581119 41 GGACTGGGTGTGCTGCTCTACGAGATGCTGGTTGGCGAGGT GGACTGGGTGTGCTGCTCTACGATATGCTGGTTGGCGAGGT < 41bp 0.85225701229273 0.523981001491052 0.1523793 0.023871154 prediction 0.656552021603355 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14581099 chr19:14581102 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_51279 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14581003-14581109
64251 chr5 74647364 74647364 1 + A C UCEC 74647360 + 74647340 74647380 41 AGTACTGGTGACACAGGAACCTGAAATTGAACTTCCCAGGG AGTACTGGTGACACAGGAACCTGACATTGAACTTCCCAGGG < 41bp 0.828259020056293 0.457730179155258 0.11746943 0.0826281 prediction 0.656518040112585 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74647360 chr5:74647364 nonsynonymous SNV 0.972 0 25 hm5C_associated_SNPs_51280 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:74647340-74647372
64251 chr10 94454417 94454417 1 + A C PRAD 94454413 + 94454393 94454433 41 AGGTGCTTCTTTGGATAGCTCTCAATGTTCGCCCTCCCCTG AGGTGCTTCTTTGGATAGCTCTCACTGTTCGCCCTCCCCTG < 41bp 0.828252243034615 0.445559444664534 0.2556403 0.1167905 prediction 0.656504486069231 Functional Loss - HHEX ENSG00000152804 CDS Human protein_coding chr10:94454413 chr10:94454417 nonsynonymous SNV 0.906 3 25 hm5C_associated_SNPs_51281 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:94454385-94454420
64251 chr19 58005026 58005026 1 + A C rs183192531 58005022 + 58005002 58005042 41 CAAACATTGGCGTGTTCATACTGGAGAAAGGCCTTACAAGT CAAACATTGGCGTGTTCATACTGGCGAAAGGCCTTACAAGT < 41bp 0.868142813693877 0.539956035368113 0.2512401 0.20608023 prediction 0.656373556651528 Functional Loss - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58005022 chr19:58005026 synonymous SNV . 0 25 hm5C_associated_SNPs_51287 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:58005018-58005070
64251 chr22 38201932 38201932 1 + G T UCEC 38201929 + 38201909 38201949 41 CCAAAGAAGGCATCCAAGCCCAAGAAGGCTGCCTCCAAAGC CCAAAGAAGGCATCCAAGCCCAATAAGGCTGCCTCCAAAGC < 41bp 0.828172326652544 0.473951749331151 0.11908305 0.10751882 prediction 0.656344653305087 Functional Loss - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201929 chr22:38201932 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51292 0 0 1 GRWD1 POSTAR2 ENCODE chr22:38201925-38201959
64251 chr17 46628425 46628425 1 - C A LUAD 46628428 - 46628408 46628448 41 CCCCCGGGGTCGGCGGCGTCCAAGCGGGCGCGGACGGCGTA CCCCCGGGGTCGGCGGCGTCCAATCGGGCGCGGACGGCGTA < 41bp 0.828161123243446 0.482315229008212 0.88515073 0.73578346 prediction 0.656322246486893 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628428 chr17:46628425 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_51296 0 0 1 BUD13 POSTAR2 ENCODE chr17:46628411-46628477
64251 chr14 93273266 93273266 1 + G T UCEC 93273263 + 93273243 93273283 41 ATGAAGTTCAGTCTTTAAATCAAGAAATGGCCTCGTTACTC ATGAAGTTCAGTCTTTAAATCAATAAATGGCCTCGTTACTC < 41bp 0.828118065119617 0.488887439466779 0.6135157 0.18556058 prediction 0.656236130239235 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93273263 chr14:93273266 stopgain 0.996 1 24 hm5C_associated_SNPs_51301 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:93273258-93273296
64251 chr2 206590770 206590770 1 + G T HNSC 206590767 + 206590747 206590787 41 CTCCATGGTGATGACAATGGCTGGACCCCCAACTTGGATTC CTCCATGGTGATGACAATGGCTGTACCCCCAACTTGGATTC < 41bp 0.856314816337232 0.528233805564785 0.88523364 0.43213245 prediction 0.656162021544894 Functional Loss - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206590767 chr2:206590770 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51304 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:206590759-206590782
64251 chr3 136047665 136047665 1 + G T UCEC 136047662 + 136047642 136047682 41 GCTGCTCAGGCAGAGTACATCGAGAAGTTTGCCAACCCTTT GCTGCTCAGGCAGAGTACATCGATAAGTTTGCCAACCCTTT < 41bp 0.828050409556657 0.471263661097228 0.87852 0.28979513 prediction 0.656100819113315 Functional Loss - PCCB ENSG00000114054 CDS Human protein_coding chr3:136047662 chr3:136047665 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_51306 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:136047665-136047697
64251 chr1 223940648 223940648 1 + G T READ 223940645 + 223940625 223940665 41 GGCTCCACCGCGGGAGGTTGCAGGAACTACCCGAGTAAGGG GGCTCCACCGCGGGAGGTTGCAGTAACTACCCGAGTAAGGG < 41bp 0.850771449739488 0.522789801282344 0.9005593 0.71047586 prediction 0.655963296914289 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223940645 chr1:223940648 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_51313 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:223940634-223940657
64251 chr3 127327356 127327356 1 + G T SARC 127327353 + 127327333 127327373 41 GACAGCTGCAAGCCAGGAGACGAGATAGTAAGTGGCCGGGG GACAGCTGCAAGCCAGGAGACGATATAGTAAGTGGCCGGGG < 41bp 0.861228556850578 0.533271934650104 0.49375883 0.09225047 prediction 0.655913244400948 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327353 chr3:127327356 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_51314 0 0 1 YBX3 POSTAR2 ENCODE chr3:127327339-127327357
64251 chr12 97337517 97337517 1 + G T HNSC 97337514 + 97337494 97337534 41 AGAAAATATATATGGGAAAACAGGAATCTAAAGACTCCTTC AGAAAATATATATGGGAAAACAGTAATCTAAAGACTCCTTC < 41bp 0.828928267944496 0.5009943984924 0.39922196 0.27409074 prediction 0.655867738904192 Functional Loss - NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97337514 chr12:97337517 stopgain 0.982 1 24 hm5C_associated_SNPs_51317 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:97337509-97337524
64251 chr14 56755202 56755202 1 + G T COAD 56755199 + 56755179 56755219 41 ATCGACTTCGTTGTCACAGACACGATTTCTGGCAGCCAGAA ATCGACTTCGTTGTCACAGACACTATTTCTGGCAGCCAGAA < 41bp 0.855783446886709 0.527891583357909 0.02406913 0.008574516 prediction 0.655783727057601 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56755199 chr14:56755202 synonymous SNV . 0 24 hm5C_associated_SNPs_51318 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:56755197-56755209
64251 chr6 43042368 43042368 1 + G T KIRP 43042365 + 43042345 43042385 41 TGTTGTCTGTTTCAGGTCTCCCGGGGCCTCAGTGCCAGCAC TGTTGTCTGTTTCAGGTCTCCCGTGGCCTCAGTGCCAGCAC < 41bp 0.827790292906582 0.464746632118659 0.9328885 0.49319786 prediction 0.655580585813164 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43042365 chr6:43042368 synonymous SNV . 0 24 hm5C_associated_SNPs_51325 0 0 4 BUD13 POSTAR2 ENCODE chr6:43042357-43042376
64251 chr3 148847543 148847543 1 + G T LUAD 148847540 + 148847520 148847560 41 CTGTACAACCTGCACCCGTTCGGGTCGCAGCAGGTGGTGCC CTGTACAACCTGCACCCGTTCGGTTCGCAGCAGGTGGTGCC < 41bp 0.846886259100381 0.519111433562424 0.898556 0.32026032 prediction 0.655549651075912 Functional Loss - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148847540 chr3:148847543 synonymous SNV . 0 24 hm5C_associated_SNPs_51326 0 0 1 DDX3X POSTAR2 ENCODE chr3:148847459-148847589
64251 chr9 104075222 104075222 1 + G T COAD 104075219 + 104075199 104075239 41 CCACTGCTCGGACGTGATTGCTGGTTTCATCCTGGGCACTG CCACTGCTCGGACGTGATTGCTGTTTTCATCCTGGGCACTG < 41bp 0.827767122121596 0.477854953828283 0.15262806 0.06147185 prediction 0.655534244243193 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104075219 chr9:104075222 nonsynonymous SNV 0.914 5 24 hm5C_associated_SNPs_51327 0 0 1 PRPF8 POSTAR2 ENCODE chr9:104075196-104075274
64251 chrX 151869719 151869719 1 + G T BLCA 151869716 + 151869696 151869736 41 CGGTCACAAAGGCAGAAATGCTGGGGAGTGTCGTCGGAAAT CGGTCACAAAGGCAGAAATGCTGTGGAGTGTCGTCGGAAAT < 41bp 0.827763627773198 0.464392014136892 0.8927054 0.42187414 prediction 0.655527255546396 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869716 chrX:151869719 nonsynonymous SNV 0.041 1 24 hm5C_associated_SNPs_51328 0 0 2 LIN28B POSTAR2 ENCODE chrX:151869712-151869744
64251 chr19 17885888 17885888 1 + G T LUSC 17885885 + 17885865 17885905 41 AGATTTCCTGGAGCCCGATTCAGGGGTGAGTGATGTGGGAG AGATTTCCTGGAGCCCGATTCAGTGGTGAGTGATGTGGGAG < 41bp 0.827698454898776 0.457593132522234 0.95899254 0.722527 prediction 0.655396909797551 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17885885 chr19:17885888 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_51332 0 0 7 AARS POSTAR2 ENCODE chr19:17885876-17885929
64251 chr3 111710446 111710446 1 + A C rs150288585 111710442 + 111710422 111710462 41 CAGGTTGCCGATCGAGTACTCAGCACAGATGTGGATGTCAT CAGGTTGCCGATCGAGTACTCAGCCCAGATGTGGATGTCAT < 41bp 0.865760125583839 0.538171585069506 0.17108613 0.11646509 prediction 0.655177081028667 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111710442 chr3:111710446 nonsynonymous SNV 0.921 0 25 hm5C_associated_SNPs_51341 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:111710427-111710460
64251 chr21 44441534 44441534 1 + A C SKCM 44441530 + 44441510 44441550 41 TGATGCGGTCCTGGCTCTTCCAGCACATCGGGGTAAGGACG TGATGCGGTCCTGGCTCTTCCAGCCCATCGGGGTAAGGACG < 41bp 0.827552315959785 0.43985184366774 0.10287872 0.21612805 prediction 0.655104631919569 Functional Loss - PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44441530 chr21:44441534 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_51342 0 0 1 PRPF8 POSTAR2 ENCODE chr21:44441508-44441582
64251 chr7 30673470 30673470 1 + G T LIHC 30673467 + 30673447 30673487 41 ACTGGTAAAAAAGAGACAATCGAGGAATGAGGACAATTTTG ACTGGTAAAAAAGAGACAATCGATGAATGAGGACAATTTTG < 41bp 0.827516963929529 0.484041191302774 0.868864 0.10827747 prediction 0.655033927859058 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30673467 chr7:30673470 nonsynonymous SNV 0.967 1 24 hm5C_associated_SNPs_51346 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30673469-30673497
64251 chr12 95879729 95879729 1 + G T COAD 95879726 + 95879706 95879746 41 ATGGTGTATTTCCCAAAGGACAAGAATGCGAATACCCACCC ATGGTGTATTTCCCAAAGGACAATAATGCGAATACCCACCC < 41bp 0.843887522416171 0.51640386165396 0.17842576 0.23804069 prediction 0.654967321524421 Functional Loss - METAP2 ENSG00000111142 CDS Human protein_coding chr12:95879726 chr12:95879729 stopgain 0.997 1 24 hm5C_associated_SNPs_51349 0 0 23 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:95879676-95879738
64251 chr11 60689353 60689353 1 + G T UCEC 60689350 + 60689330 60689370 41 ACTGGCTGCTGTCTCTGCTCCTCGGCTTGGTCTTGGCCTTG ACTGGCTGCTGTCTCTGCTCCTCTGCTTGGTCTTGGCCTTG < 41bp 0.827474766453138 0.469438853519732 0.35599658 0.13641813 prediction 0.654949532906277 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689350 chr11:60689353 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_51350 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:60689320-60689360
64251 chr9 135546108 135546108 1 + G T LGG 135546105 + 135546085 135546125 41 GAGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATT GAGCCAGCAGCGGACGCGGCCCCTGGGCCCAGCGCTGCATT < 41bp 0.846586066177746 0.519163451893041 0.3882633 0.1647054 prediction 0.65484522856941 Functional Loss - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135546105 chr9:135546108 synonymous SNV . 0 24 hm5C_associated_SNPs_51355 0 0 9 DDX3X POSTAR2 ENCODE chr9:135546065-135546133
64251 chr12 132400636 132400636 1 + G T LUAD 132400633 + 132400613 132400653 41 TGCAGTCCTGCCGGAACCTGCGGGGCTCACCCAAGCTGCCC TGCAGTCCTGCCGGAACCTGCGGTGCTCACCCAAGCTGCCC < 41bp 0.82737268156164 0.463676806774189 0.92183745 0.79475945 prediction 0.654745363123279 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400633 chr12:132400636 nonsynonymous SNV 0.739 0 24 hm5C_associated_SNPs_51358 0 0 1 GRWD1 POSTAR2 ENCODE chr12:132400560-132400636
64251 chr3 128998742 128998742 1 + G T UCEC 128998739 + 128998719 128998759 41 CAACAGCCCAGTGCTTCTGTCTCGACTGCACTTTGAGAAGG CAACAGCCCAGTGCTTCTGTCTCTACTGCACTTTGAGAAGG < 41bp 0.827371976209646 0.479096504139699 0.11583236 0.41206697 prediction 0.654743952419292 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:128998739 chr3:128998742 nonsynonymous SNV 0.527 1 24 hm5C_associated_SNPs_51359 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128998718-128998748
64251 chr12 53453118 53453118 1 + G T SKCM 53453115 + 53453095 53453135 41 CTGGGCGCGAGACGGCCATCCTAGATGACGAAGAGCAGCCC CTGGGCGCGAGACGGCCATCCTATATGACGAAGAGCAGCCC < 41bp 0.846739146293776 0.519368849029794 0.31247574 0.6889116 prediction 0.654740594527964 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453115 chr12:53453118 nonsynonymous SNV 0.429 4 24 hm5C_associated_SNPs_51360 0 0 2 BUD13 POSTAR2 ENCODE chr12:53453102-53453154
64251 chr17 40714919 40714919 1 + G T UCEC 40714916 + 40714896 40714936 41 CTACTGACCAATATCCGAACCAAGAGCACCTTTCTCCCTCC CTACTGACCAATATCCGAACCAATAGCACCTTTCTCCCTCC < 41bp 0.827310183375655 0.458947839442238 0.2117956 0.012788177 prediction 0.65462036675131 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40714916 chr17:40714919 nonsynonymous SNV 0.779 0 24 hm5C_associated_SNPs_51363 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:40714891-40714939
64251 chr2 113243499 113243499 1 + G T LUAD 113243496 + 113243476 113243516 41 CTCCTCTTTCCTTCCTAGGTCACGAGCCCGGGCTGGTACAG CTCCTCTTTCCTTCCTAGGTCACTAGCCCGGGCTGGTACAG < 41bp 0.827306601474036 0.466097531226986 0.1572327 0.099561125 prediction 0.654613202948071 Functional Loss - TTL ENSG00000114999 CDS Human protein_coding chr2:113243496 chr2:113243499 stopgain 0.994 1 24 hm5C_associated_SNPs_51364 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:113243480-113243500
64251 chr7 148495716 148495716 1 + G T HNSC 148495713 + 148495693 148495733 41 CAATGAAAACCGAACAGAAGCAGGAACAAGAAACCACACAC CAATGAAAACCGAACAGAAGCAGTAACAAGAAACCACACAC < 41bp 0.833554663136687 0.506249677125456 0.49150324 0.09102911 prediction 0.654609972022462 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148495713 chr7:148495716 stopgain 1.000 1 24 hm5C_associated_SNPs_51366 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067861 chr7:148495704-148495742
64251 chr19 9268713 9268713 1 + G T UCEC 9268710 + 9268690 9268730 41 CTTGGAGCAGGAGGAGGAGCCGAGGACAGAGGAGAGGGGCG CTTGGAGCAGGAGGAGGAGCCGATGACAGAGGAGAGGGGCG < 41bp 0.868597421946661 0.541302819738909 0.8903545 0.6598621 prediction 0.654589204415505 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9268710 chr19:9268713 nonsynonymous SNV 0.246 1 24 hm5C_associated_SNPs_51367 0 0 3 PPIG POSTAR2 ENCODE chr19:9268666-9268751
64251 chr12 27863860 27863860 1 + G T TGCT 27863857 + 27863837 27863877 41 GCATTCTCCACTGCCGTCTACTCGGCCACTCCGGTCCCGAC GCATTCTCCACTGCCGTCTACTCTGCCACTCCGGTCCCGAC < 41bp 0.848282809841863 0.521030742135617 0.23484296 0.094038635 prediction 0.654504135412492 Functional Loss - MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27863857 chr12:27863860 synonymous SNV . 0 24 hm5C_associated_SNPs_51369 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:27863800-27863860
64251 chr21 38865437 38865437 1 + G T CESC 38865434 + 38865414 38865454 41 TATTTTGGTTGAAATGCACACTGGAGAACCTCTGTTCAGTG TATTTTGGTTGAAATGCACACTGTAGAACCTCTGTTCAGTG < 41bp 0.827223002426549 0.490637182682449 0.043127 0.022988856 prediction 0.654446004853097 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38865434 chr21:38865437 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51372 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:38865415-38865457
64251 chr12 112926888 112926888 1 + G T COAD 112926885 + 112926865 112926905 41 GATGGTGCGGTCTCAGAGGTCAGGGATGGTCCAGACAGAAG GATGGTGCGGTCTCAGAGGTCAGTGATGGTCCAGACAGAAG < 41bp 0.827194434481082 0.465749501994531 0.9094713 0.48002777 prediction 0.654388868962163 Functional Loss - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926885 chr12:112926888 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_51374 5 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:112926856-112926912
64251 chr2 235962337 235962337 1 + G T LUAD 235962334 + 235962314 235962354 41 GAGCTGCACCTGGGCCTGGACAAGATGAAAAACCCCATCAC GAGCTGCACCTGGGCCTGGACAATATGAAAAACCCCATCAC < 41bp 0.827183896639107 0.477244143820444 0.8770405 0.25979146 prediction 0.654367793278214 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235962334 chr2:235962337 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51375 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:235962305-235962339
64251 chr7 129357122 129357122 1 + G T LUAD 129357120 + 129357100 129357140 41 CATCCAGACGACGCAAGCATCAGAGGCCACCCAGGCGGTGG CATCCAGACGACGCAAGCATCATAGGCCACCCAGGCGGTGG < 41bp 0.833959279336037 0.506781716631632 0.9065064 0.16932696 prediction 0.654355125408809 Functional Loss - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129357120 chr7:129357122 stopgain 1.000 1 23 hm5C_associated_SNPs_51376 0 0 1 GRWD1 POSTAR2 ENCODE chr7:129357104-129357205
64251 chr8 24771447 24771447 1 - C A rs201628186 24771450 - 24771430 24771470 41 CTGCGCTTATAGGAGGAGGACACGGTGCTGGGCGAGCCGCG CTGCGCTTATAGGAGGAGGACACTGTGCTGGGCGAGCCGCG < 41bp 0.849348167697705 0.522227670469252 0.5883334 0.43858954 prediction 0.654240994456907 Functional Loss - NEFM ENSG00000104722 CDS Human protein_coding chr8:24771450 chr8:24771447 synonymous SNV . 0 24 hm5C_associated_SNPs_51380 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr8:24771440-24771465
64251 chr2 103380882 103380882 1 + A C OV 103380878 + 103380858 103380898 41 CAACTCGACCTCCTATGACTCTGCAGTTAGTAAGTACCCTC CAACTCGACCTCCTATGACTCTGCCGTTAGTAAGTACCCTC < 41bp 0.883676001738608 0.556591486550253 0.30644023 0.299738 prediction 0.654169030376709 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103380878 chr2:103380882 synonymous SNV . 0 25 hm5C_associated_SNPs_51381 0 0 1 YBX3 POSTAR2 ENCODE chr2:103380821-103380882
64251 chr22 50960982 50960982 1 + G T HNSC 50960979 + 50960959 50960999 41 GAGCCCGAGGGAGCAGACCCCAGGGAAGCCGCTGACCTTGG GAGCCCGAGGGAGCAGACCCCAGTGAAGCCGCTGACCTTGG < 41bp 0.82699888073265 0.459034848973881 0.89208555 0.57751215 prediction 0.653997761465301 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50960979 chr22:50960982 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_51388 0 0 5 BUD13 POSTAR2 ENCODE chr22:50960937-50960991
64251 chr19 19790235 19790235 1 + A C rs138984536 19790231 + 19790211 19790251 41 AGACGCCCCGTAAACAGAAACAACATGGGAAAGCCTCCATT AGACGCCCCGTAAACAGAAACAACCTGGGAAAGCCTCCATT < 41bp 0.826984547846988 0.457186679153414 0.16777283 0.05102253 prediction 0.653969095693976 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790231 chr19:19790235 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_51389 0 0 1 UCHL5 POSTAR2 ENCODE chr19:19790118-19790242
64251 chr19 16964979 16964979 1 + A C OV 16964975 + 16964955 16964995 41 TCCGCCGGGTGCTGAAGAGCCAGGAGGTGTATGAAAACTTC TCCGCCGGGTGCTGAAGAGCCAGGCGGTGTATGAAAACTTC < 41bp 0.879079994456546 0.552217666457843 0.7603724 0.73764706 prediction 0.653724655997405 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16964975 chr19:16964979 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51396 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:16964973-16965000
64251 chr1 36766574 36766574 1 + A C COAD 36766570 + 36766550 36766590 41 CTACAAAGCAGAAGAGTACACTGAAGAGACAGAGGAAAGAG CTACAAAGCAGAAGAGTACACTGACGAGACAGAGGAAAGAG < 41bp 0.826853591868032 0.43635745888305 0.040442646 0.035885423 prediction 0.653707183736064 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36766570 chr1:36766574 nonsynonymous SNV 0.981 1 25 hm5C_associated_SNPs_51398 0 0 21 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:36766557-36766589
64251 chrX 103042816 103042816 1 + G T LIHC 103042813 + 103042793 103042833 41 GTGTACATTTACTTCAACACCTGGACCACCTGCCAGTCTAT GTGTACATTTACTTCAACACCTGTACCACCTGCCAGTCTAT < 41bp 0.864942747459751 0.53811326795488 0.18365732 0.044548064 prediction 0.653658959009742 Functional Loss - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103042813 chrX:103042816 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51400 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:103042800-103042840
64251 chr1 41228657 41228657 1 + G T SARC 41228654 + 41228634 41228674 41 CCAACAGGCCCAGAGTGGCACTGGACAGACCATGCAGGTGA CCAACAGGCCCAGAGTGGCACTGTACAGACCATGCAGGTGA < 41bp 0.826821019575568 0.4960516259989 0.38361958 0.089803934 prediction 0.653642039151135 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41228654 chr1:41228657 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51401 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:41228644-41228664
64251 chr12 56380883 56380883 1 + G T LUSC 56380880 + 56380860 56380900 41 GTTTTGTCAAAGGGCAGTTCCATGAGTACCAGGAGAGCACC GTTTTGTCAAAGGGCAGTTCCATTAGTACCAGGAGAGCACC < 41bp 0.826745955845439 0.479691187532629 0.3803754 0.25877464 prediction 0.653491911690877 Functional Loss - RAB5B ENSG00000111540 CDS Human protein_coding chr12:56380880 chr12:56380883 stopgain 1.000 1 24 hm5C_associated_SNPs_51406 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:56380860-56380886
64251 chr2 42557315 42557315 1 + G T GBM 42557312 + 42557292 42557332 41 AGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCAAGACCCT AGCAGGCCAAAGCCACCCTTCTGTAGGACCAGCAAGACCCT < 41bp 0.845190638652518 0.51859229611132 0.7317127 0.13743132 prediction 0.653196685082395 Functional Loss - EML4 ENSG00000143924 CDS Human protein_coding chr2:42557312 chr2:42557315 stopgain 0.003 0 24 hm5C_associated_SNPs_51415 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:42557301-42557324
64251 chr17 4925855 4925855 1 + G T COAD 4925852 + 4925832 4925872 41 GTGGCAGTGAGGAGGGAGCCCGAGGGGCGGAGGTGGAGGAC GTGGCAGTGAGGAGGGAGCCCGATGGGCGGAGGTGGAGGAC < 41bp 0.871331438678678 0.544760083606511 0.91355157 0.89351416 prediction 0.653142710144336 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4925852 chr17:4925855 nonsynonymous SNV 0.977 2 24 hm5C_associated_SNPs_51416 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4925828-4925866
64251 chr7 106545637 106545637 1 + A C HNSC 106545633 + 106545613 106545653 41 GTTCTCCATGATGCTGATGACAGGAATGCCCCAGTTAACAA GTTCTCCATGATGCTGATGACAGGCATGCCCCAGTTAACAA < 41bp 0.826540298418122 0.464880096754794 0.40332693 0.24641776 prediction 0.653080596836243 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106545633 chr7:106545637 synonymous SNV . 0 25 hm5C_associated_SNPs_51418 0 0 1 YBX3 POSTAR2 ENCODE chr7:106545571-106545649
64251 chr18 19209092 19209092 1 + G T STAD 19209089 + 19209069 19209109 41 TGGCAGAGGAAGAGGGGGTCCTAGGCGATAATGTCTCTCAA TGGCAGAGGAAGAGGGGGTCCTATGCGATAATGTCTCTCAA < 41bp 0.826502073612457 0.489917480004486 0.37203997 0.18684727 prediction 0.653004147224914 Functional Loss - SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209089 chr18:19209092 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51424 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:19209058-19209166
64251 chr15 76630252 76630252 1 + G T GBM 76630249 + 76630229 76630269 41 GAGTGCAGCCAGTACCTGGACGAGACGTGCACGTGCTTCGT GAGTGCAGCCAGTACCTGGACGATACGTGCACGTGCTTCGT < 41bp 0.826455315624749 0.465319095525238 0.37510264 0.050213903 prediction 0.652910631249498 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630249 chr15:76630252 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51427 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630220-76630260
64251 chr19 4929473 4929473 1 + A C rs2123731 4929469 + 4929449 4929489 41 TGAGGACATGTGGGATGAGACGGAATTGGGGCTGTACAAGG TGAGGACATGTGGGATGAGACGGACTTGGGGCTGTACAAGG < 41bp 0.852924722356514 0.52648950931236 0.8514539 0.87124324 prediction 0.652870426088308 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4929469 chr19:4929473 . 0.028 0 25 hm5C_associated_SNPs_51430 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:4929427-4929478
64251 chr1 161133967 161133967 1 + G T COAD 161133964 + 161133944 161133984 41 TTTCCCCCAGAAAGGATTTGCTGGGGGCAAGGTGTCTCTGC TTTCCCCCAGAAAGGATTTGCTGTGGGCAAGGTGTCTCTGC < 41bp 0.826394630270025 0.455974446554907 0.55528736 0.06718922 prediction 0.652789260540051 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161133964 chr1:161133967 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_51433 0 0 2 U2AF2 POSTAR2 ENCODE chr1:161133929-161134002
64251 chr17 41368530 41368530 1 + G T SARC 41368527 + 41368507 41368547 41 ATGGTGACACAGCTGACCCTCGAGGTTCTGCACCTGTCCCT ATGGTGACACAGCTGACCCTCGATGTTCTGCACCTGTCCCT < 41bp 0.826393345290042 0.454619985205204 0.93104017 0.39671135 prediction 0.652786690580083 Functional Loss - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41368527 chr17:41368530 nonsynonymous SNV 0.058 3 24 hm5C_associated_SNPs_51434 0 0 1 GRWD1 POSTAR2 ENCODE chr17:41368481-41368569
64251 chr17 21731077 21731077 1 + G T LUAD 21731074 + 21731054 21731094 41 TCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCAGTCTT TCATCTTTGCAGGCAAGCAGCTGTAAGATGGCCGCAGTCTT < 41bp 0.826384255854348 0.481111537746607 0.8806428 0.8808998 prediction 0.652768511708696 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731074 chr17:21731077 stopgain 0.957 0 24 hm5C_associated_SNPs_51435 0 0 6 METAP2 POSTAR2 ENCODE chr17:21731061-21731096
64251 chr7 36324418 36324418 1 + G T ESCA 36324415 + 36324395 36324435 41 TGGCGGGCCCCAGCCCATACCTCGGGAGGTTCAAGGTACCC TGGCGGGCCCCAGCCCATACCTCTGGAGGTTCAAGGTACCC < 41bp 0.826377041056634 0.471603444248962 0.2520998 0.28873742 prediction 0.652754082113268 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36324415 chr7:36324418 nonsynonymous SNV 0.009 2 24 hm5C_associated_SNPs_51436 0 0 4 PPIG POSTAR2 ENCODE chr7:36324359-36324431
64251 chr1 196654324 196654324 1 + A C rs1061147 196654320 + 196654300 196654340 41 TCCTGCAACCCGGGGAAATACAGCAAAATGCACAAGTACTG TCCTGCAACCCGGGGAAATACAGCCAAATGCACAAGTACTG < 41bp 0.887908785402296 0.561533693091216 0.5140585 0.6903584 prediction 0.65275018462216 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196654320 chr1:196654324 synonymous SNV . 0 25 hm5C_associated_SNPs_51437 4 1 2 SND1 POSTAR2 ENCODE chr1:196654283-196654353
64251 chr6 42903362 42903362 1 + A C STAD 42903358 + 42903338 42903378 41 AGACCATTTGCAAGAGGCTCCTGGATTATAGCCTGCACAAG AGACCATTTGCAAGAGGCTCCTGGCTTATAGCCTGCACAAG < 41bp 0.826298574385275 0.441255784114877 0.4412873 0.43295187 prediction 0.65259714877055 Functional Loss - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42903358 chr6:42903362 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51444 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:42903325-42903363
64251 chr4 20482387 20482387 1 + G T LUSC 20482384 + 20482364 20482404 41 TGTATTGAAGATGGGGCATTCAGGGCTCTCCGGGACCTGGA TGTATTGAAGATGGGGCATTCAGTGCTCTCCGGGACCTGGA < 41bp 0.826292109887612 0.484478469004308 0.93449074 0.5409992 prediction 0.652584219775224 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20482384 chr4:20482387 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_51448 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:20482367-20482403
64251 chr12 124104031 124104031 1 + G T UCEC 124104028 + 124104008 124104048 41 TTTGCCCTGCTGAGGATGCCCAAGATGCCAGAATTGAGAGG TTTGCCCTGCTGAGGATGCCCAATATGCCAGAATTGAGAGG < 41bp 0.826278194764092 0.472834689010732 0.38716197 0.18628907 prediction 0.652556389528185 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124104028 chr12:124104031 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51449 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:124104013-124104035
64251 chr12 121659957 121659957 1 + A C BRCA 121659953 + 121659933 121659973 41 AGCTGTACTGCCGGCTCTGCCGGCACCCACAGCAACGGTAC AGCTGTACTGCCGGCTCTGCCGGCCCCCACAGCAACGGTAC < 41bp 0.870364088057174 0.544086433590875 0.49279553 0.42357215 prediction 0.652555308932597 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659953 chr12:121659957 nonsynonymous SNV 0.584 0 25 hm5C_associated_SNPs_51450 0 0 1 PRPF8 POSTAR2 ENCODE chr12:121659889-121660036
64251 chr15 41863274 41863274 1 + G T UCEC 41863271 + 41863251 41863291 41 TGCGGGAGGCCCAGCTGAAGCAAGAGGATGGCTCCTTTGTG TGCGGGAGGCCCAGCTGAAGCAATAGGATGGCTCCTTTGTG < 41bp 0.826263942581993 0.457263055532797 0.8681611 0.35589963 prediction 0.652527885163985 Functional Loss - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41863271 chr15:41863274 stopgain 0.989 0 24 hm5C_associated_SNPs_51453 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr15:41863260-41863280
64251 chr10 96306225 96306225 1 + A C LUSC 96306221 + 96306201 96306241 41 GGAAGAACAGCTTGAAGCTGCTGGACTAGAGAGAGAGCGGA GGAAGAACAGCTTGAAGCTGCTGGCCTAGAGAGAGAGCGGA < 41bp 0.826168900216015 0.456243856115736 0.29897457 0.19575912 prediction 0.65233780043203 Functional Loss - HELLS ENSG00000119969 CDS Human protein_coding chr10:96306221 chr10:96306225 synonymous SNV . 0 25 hm5C_associated_SNPs_51458 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:96306150-96306247
64251 chr3 16327930 16327930 1 + G T UCEC 16327927 + 16327907 16327947 41 TCCGCTTGCTTGTTGCTGATCAAGACTTTTCCTTTAAAGCT TCCGCTTGCTTGTTGCTGATCAATACTTTTCCTTTAAAGCT < 41bp 0.826164894150342 0.462650488244083 0.16417545 0.058849096 prediction 0.652329788300684 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16327927 chr3:16327930 nonsynonymous SNV 0.022 2 24 hm5C_associated_SNPs_51459 0 0 2 PPIG POSTAR2 ENCODE chr3:16327842-16327954
64251 chr3 10191572 10191572 1 + G T KIRC 10191569 + 10191549 10191589 41 TCAGGTCGCTCTACGAAGATCTGGAAGACCACCCAAATGTG TCAGGTCGCTCTACGAAGATCTGTAAGACCACCCAAATGTG < 41bp 0.854965639564933 0.528818785757468 0.2580072 0.024376392 prediction 0.652293707614931 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191569 chr3:10191572 stopgain 1.000 1 24 hm5C_associated_SNPs_51462 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr3 49021773 49021773 1 + A C rs143241623 49021769 + 49021749 49021789 41 TGGCATGGGGGCTGTGTTTGCACAAGTTATTTTCATGTTAC TGGCATGGGGGCTGTGTTTGCACACGTTATTTTCATGTTAC < 41bp 0.83259578117262 0.506489176307636 0.12402129 0.21731687 prediction 0.652213209729969 Functional Loss - ARIH2 ENSG00000177479 UTR3 Human protein_coding chr3:49021769 chr3:49021773 . . 0 25 hm5C_associated_SNPs_51468 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr3:49021721-49021774
64251 chr15 99874160 99874160 1 + G T BRCA 99874157 + 99874137 99874177 41 ATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGT ATTTGAAGGAGCTGCAGACACTATACATTTCTACCAATCGT < 41bp 0.826083163136888 0.487211556702696 0.3687805 0.5212947 prediction 0.652166326273775 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99874157 chr15:99874160 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51470 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163974 chr15:99874159-99874160
64251 chr1 36752135 36752135 1 + G T STAD 36752132 + 36752112 36752152 41 ATCCATGGGGCCAATATAACCGAGGAGGCTATGGAAACTAC ATCCATGGGGCCAATATAACCGATGAGGCTATGGAAACTAC < 41bp 0.82607841109261 0.469143937995198 0.5634963 0.061386675 prediction 0.652156822185221 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752132 chr1:36752135 stopgain 1.000 1 24 hm5C_associated_SNPs_51472 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:36752106-36752144
64251 chr21 40880951 40880951 1 + A C UCEC 40880947 + 40880927 40880967 41 AGAAGAAGGAGAGACAGCCACAGAAGAGGTACGGTCGACCA AGAAGAAGGAGAGACAGCCACAGACGAGGTACGGTCGACCA < 41bp 0.826067952345343 0.455027921762576 0.38777417 0.2096256 prediction 0.652135904690687 Functional Loss - SH3BGR;WRB-SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40880947 chr21:40880951 nonsynonymous SNV 0.923 0 25 hm5C_associated_SNPs_51474 0 0 1 TRA2A POSTAR2 ENCODE chr21:40880923-40880953
64251 chr6 37446287 37446287 1 + G T SKCM 37446284 + 37446264 37446304 41 CCCATGGGCCTCTACATCGTCAGGACAGTGAATGGTGGGTG CCCATGGGCCTCTACATCGTCAGTACAGTGAATGGTGGGTG < 41bp 0.826021780181196 0.469200436654606 0.91318214 0.31736428 prediction 0.652043560362392 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37446284 chr6:37446287 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51478 0 0 3 GRWD1 POSTAR2 ENCODE chr6:37446266-37446297
64251 chr14 24606982 24606982 1 + G T UCEC 24606979 + 24606959 24606999 41 CAGCGCTTGAAGCCTGAGATCAAGGATGTCATTGAGCAGCT CAGCGCTTGAAGCCTGAGATCAATGATGTCATTGAGCAGCT < 41bp 0.82600125344888 0.456401142832545 0.8977835 0.13187104 prediction 0.65200250689776 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24606979 chr14:24606982 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51479 0 0 13 AKAP8L POSTAR2 ENCODE chr14:24606908-24606982
64251 chr19 52877610 52877610 1 + G T UCEC 52877607 + 52877587 52877627 41 TTGGAGCAAAGGAGAGATCCCCGGAATCTGCAGAGTGAAGT TTGGAGCAAAGGAGAGATCCCCGTAATCTGCAGAGTGAAGT < 41bp 0.82596642602446 0.480930288388377 0.49662858 0.20353344 prediction 0.65193285204892 Functional Loss - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52877607 chr19:52877610 synonymous SNV . 0 24 hm5C_associated_SNPs_51481 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:52877591-52877627
64251 chr8 145065972 145065972 1 + G T STAD 145065969 + 145065949 145065989 41 ATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTC ATCCGACAGGCCTTCATCCGCAATGTGGGTAGGGGCATCTC < 41bp 0.871540666184742 0.545596240675314 0.8617134 0.40553677 prediction 0.651888851018857 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145065969 chr8:145065972 nonsynonymous SNV 0.954 4 24 hm5C_associated_SNPs_51482 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145065947-145065975
64251 chr2 211460281 211460281 1 + G T LUAD 211460278 + 211460258 211460298 41 GGCTGGAGAATTTGATTACTCAGGATCTCAAGCTGTAAAAG GGCTGGAGAATTTGATTACTCAGTATCTCAAGCTGTAAAAG < 41bp 0.852318198224032 0.526439421413831 0.86666757 0.21586728 prediction 0.651757553620403 Functional Loss - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211460278 chr2:211460281 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_51488 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:211460261-211460282
64251 chr11 117038152 117038152 1 + G T LUAD 117038149 + 117038129 117038169 41 TGCCCCAGGGTTTGTTACCTCGAGGTGAGAAACCCAATCCT TGCCCCAGGGTTTGTTACCTCGATGTGAGAAACCCAATCCT < 41bp 0.825845539041423 0.474791123820368 0.89592296 0.65260875 prediction 0.651691078082846 Functional Loss - PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117038149 chr11:117038152 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51490 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117038150-117038181
64251 chr8 143809137 143809137 1 + G T rs200783896 143809134 + 143809114 143809154 41 TCGAGGTGCGCACCCGCCTGCTGGGCTGGGACGACCGCGCG TCGAGGTGCGCACCCGCCTGCTGTGCTGGGACGACCGCGCG < 41bp 0.825771953870086 0.484926234929816 0.15989962 0.09462488 prediction 0.651543907740173 Functional Loss - THEM6 ENSG00000130193 CDS Human protein_coding chr8:143809134 chr8:143809137 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_51493 0 0 2 SND1 POSTAR2 ENCODE chr8:143808988-143809203
64251 chr16 67645270 67645270 1 + G T UCEC 67645267 + 67645247 67645287 41 CCAATGGAGAGGTGGAGACACTAGAACAAGGGGAACTTCCA CCAATGGAGAGGTGGAGACACTATAACAAGGGGAACTTCCA < 41bp 0.825715940757205 0.494679266555737 0.90352976 0.9325894 prediction 0.651431881514411 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67645267 chr16:67645270 stopgain 1.000 1 24 hm5C_associated_SNPs_51494 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:67645260-67645280
64251 chr17 27225646 27225646 1 - C A UCEC 27225649 - 27225629 27225669 41 GAGGCTGGCAGGGCTTGGGCCTGGGGAGGATGCTGAACCCG GAGGCTGGCAGGGCTTGGGCCTGTGGAGGATGCTGAACCCG < 41bp 0.875866866580307 0.550160056328817 0.8619056 0.681674 prediction 0.65141362050298 Functional Loss - DHRS13 ENSG00000167536 CDS Human protein_coding chr17:27225649 chr17:27225646 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_51495 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:27225634-27225660
64251 chr20 36030925 36030925 1 + G T OV 36030922 + 36030902 36030942 41 ACATCCTGGTGGGAGAGAACCTGGTGTGCAAAGTGGCGGAC ACATCCTGGTGGGAGAGAACCTGTTGTGCAAAGTGGCGGAC < 41bp 0.825663986409822 0.459933487379397 0.89331347 0.3470236 prediction 0.651327972819645 Functional Loss - SRC ENSG00000197122 CDS Human protein_coding chr20:36030922 chr20:36030925 nonsynonymous SNV 0.982 2 24 hm5C_associated_SNPs_51498 0 0 2 PPIG POSTAR2 ENCODE chr20:36030906-36030965
64251 chr7 98985783 98985783 1 + G T OV 98985780 + 98985760 98985800 41 CTGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCG CTGGTCATCCTGCGGATCAACCGTGCTGCCCGCTGCGTGCG < 41bp 0.880411288399538 0.554767894309127 0.9324287 0.2855326 prediction 0.651286788180821 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985780 chr7:98985783 synonymous SNV . 0 24 hm5C_associated_SNPs_51501 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985778-98985811
64251 chr1 25678175 25678175 1 + G T UCEC 25678172 + 25678152 25678192 41 ATAGTTACAGTGAAGGTTGTCTGGGTCAAACAGGTAAATAG ATAGTTACAGTGAAGGTTGTCTGTGTCAAACAGGTAAATAG < 41bp 0.85175905188318 0.526128013909769 0.4934941 0.08933428 prediction 0.651262075946824 Functional Loss - TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25678172 chr1:25678175 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51503 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25678117-25678180
64251 chr11 94278557 94278557 1 + G T PAAD 94278554 + 94278534 94278574 41 CTTTCGAGAACTCGCAGCACCTGGATTATATCACCGAGAAG CTTTCGAGAACTCGCAGCACCTGTATTATATCACCGAGAAG < 41bp 0.860034443972921 0.534414509536775 0.49427825 0.16410768 prediction 0.651239868872293 Functional Loss - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94278554 chr11:94278557 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_51507 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:94278540-94278560
64251 chr18 12971218 12971218 1 + G T PCPG 12971215 + 12971195 12971235 41 AGTAGCCCCAACGCAATGGCCAAGGTTCAGATTTTTGAATA AGTAGCCCCAACGCAATGGCCAATGTTCAGATTTTTGAATA < 41bp 0.825516310361216 0.472236674702178 0.30642092 0.085152835 prediction 0.651032620722432 Functional Loss - SEH1L ENSG00000085415 CDS Human protein_coding chr18:12971215 chr18:12971218 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51514 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr18:12971162-12971220
64251 chr16 28993729 28993729 1 + G T CESC 28993726 + 28993706 28993746 41 CCGGAGTCCTGGGTGTGGGCCTGGGTGTGGAGATCAGCCGC CCGGAGTCCTGGGTGTGGGCCTGTGTGTGGAGATCAGCCGC < 41bp 0.874780530296622 0.549265811105595 0.7623035 0.19153947 prediction 0.651029438382055 Functional Loss - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28993726 chr16:28993729 nonsynonymous SNV 0.987 4 24 hm5C_associated_SNPs_51515 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:28993698-28993736
64251 chr15 99901568 99901568 1 + G T BLCA 99901565 + 99901545 99901585 41 GGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTT GGTGCTCCCATTCAAGTTTCCGATGTGAAGCTGCTTTCCTT < 41bp 0.825508534673516 0.469812250873124 0.9065335 0.20176357 prediction 0.651017069347033 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99901565 chr15:99901568 nonsynonymous SNV 0.920 3 24 hm5C_associated_SNPs_51518 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:99901556-99901579
64251 chr7 127231094 127231094 1 + G T LUSC 127231091 + 127231071 127231111 41 GACATGCCCAACGCCATGCCCGTGAGCGAGCTGACTGACAA GACATGCCCAACGCCATGCCCGTTAGCGAGCTGACTGACAA < 41bp 0.861950021707923 0.536446992646032 0.10702932 0.015306979 prediction 0.651006058123782 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231091 chr7:127231094 synonymous SNV . 0 24 hm5C_associated_SNPs_51519 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:127231064-127231138
64251 chrX 56590827 56590827 1 + A C LUSC 56590823 + 56590803 56590843 41 AGCTCCAGAGCCAGATGCAGCAGCAGCTTATGGCCAGCCCT AGCTCCAGAGCCAGATGCAGCAGCCGCTTATGGCCAGCCCT < 41bp 0.825415033298061 0.468169206657862 0.19243413 0.21992764 prediction 0.650830066596122 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590823 chrX:56590827 nonsynonymous SNV 0.741 5 25 hm5C_associated_SNPs_51523 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:56590820-56590840
64251 chr18 56348415 56348415 1 + G T LUSC 56348412 + 56348392 56348432 41 TTGCTTTCAGTTGCCTAGACCTGGAGCAGTGTTCTCTTAAG TTGCTTTCAGTTGCCTAGACCTGTAGCAGTGTTCTCTTAAG < 41bp 0.825409223840794 0.468519073493798 0.43053836 0.25532797 prediction 0.650818447681589 Functional Loss - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56348412 chr18:56348415 stopgain 1.000 1 24 hm5C_associated_SNPs_51524 0 0 4 BUD13 POSTAR2 ENCODE chr18:56348353-56348469
64251 chr11 67379610 67379610 1 + G T UCEC 67379607 + 67379587 67379627 41 GCAGGTGTGGACTGGATGAACAAGGTGATGGCACGTTTCGT GCAGGTGTGGACTGGATGAACAATGTGATGGCACGTTTCGT < 41bp 0.871452135474829 0.546049510478044 0.89742225 0.3700639 prediction 0.650805249993571 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67379607 chr11:67379610 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51525 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:67379593-67379621
64251 chr7 48146585 48146585 1 + G T GBM 48146582 + 48146562 48146602 41 ATCCGGAAAACGGACCTTAACAAGAAGCTGGTGCAGGAGCT ATCCGGAAAACGGACCTTAACAATAAGCTGGTGCAGGAGCT < 41bp 0.839671856560209 0.514275309385446 0.43685442 0.09497005 prediction 0.650793094349524 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48146582 chr7:48146585 nonsynonymous SNV 0.285 1 24 hm5C_associated_SNPs_51526 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:48146582-48146628
64251 chr1 212792760 212792760 1 + A C UCS 212792756 + 212792736 212792776 41 AAGGCTCAGATTGAGGAGCTCAAGAACGAGAAGCAGCATTT AAGGCTCAGATTGAGGAGCTCAAGCACGAGAAGCAGCATTT < 41bp 0.825388958560019 0.461660124031118 0.14773378 0.08281928 prediction 0.650777917120038 Functional Loss - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212792756 chr1:212792760 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_51529 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212792699-212792783
64251 chr10 116593078 116593078 1 + G T LUSC 116593075 + 116593055 116593095 41 TGGTTCAAGAAGAAAATGAACGGGAATCTGGAGAGACAGGG TGGTTCAAGAAGAAAATGAACGGTAATCTGGAGAGACAGGG < 41bp 0.846820758541743 0.521444836131971 0.83401346 0.7095293 prediction 0.650751844819544 Functional Loss - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116593075 chr10:116593078 stopgain 0.999 1 24 hm5C_associated_SNPs_51531 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:116593078-116593100
64251 chr19 11474845 11474845 1 + G T STAD 11474842 + 11474822 11474862 41 GTCTCTTTGTCTCAGGAACCCGAGGTCTGCAGGCCGCATTC GTCTCTTTGTCTCAGGAACCCGATGTCTGCAGGCCGCATTC < 41bp 0.876893300686 0.551548288767699 0.933892 0.6247693 prediction 0.650690023836603 Functional Loss - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474842 chr19:11474845 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_51535 0 0 3 BUD13 POSTAR2 ENCODE chr19:11474807-11474870
64251 chr1 161719735 161719735 1 + G T rs149171825 161719732 + 161719712 161719752 41 GCCGTCGCGGAGCCAGATCACCTGAGGGAAGCGGGCATCAC GCCGTCGCGGAGCCAGATCACCTTAGGGAAGCGGGCATCAC < 41bp 0.851305161551979 0.525974064972527 0.84703255 0.40880877 prediction 0.650662193158905 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719732 chr1:161719735 synonymous SNV . 0 24 hm5C_associated_SNPs_51536 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161719715-161719737
64251 chr12 4722853 4722853 1 + G T SKCM 4722850 + 4722830 4722870 41 GCTGTCGGGGCGGAGGTGTCCATGACCTCCCCAGGACAGAG GCTGTCGGGGCGGAGGTGTCCATTACCTCCCCAGGACAGAG < 41bp 0.852527497421515 0.527219676953832 0.4553097 0.20856977 prediction 0.650615640935366 Functional Loss - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4722850 chr12:4722853 nonsynonymous SNV 0.033 0 24 hm5C_associated_SNPs_51537 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:4722851-4722889
64251 chr1 201845312 201845312 1 + A C rs575388259 201845308 + 201845288 201845328 41 TGACCCTTGGCCCTTGGCCTCGGCAGTGACACTGATGACAA TGACCCTTGGCCCTTGGCCTCGGCCGTGACACTGATGACAA < 41bp 0.825284185490678 0.487988330639916 0.1672892 0.14456236 prediction 0.650568370981357 Functional Loss - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201845308 chr1:201845312 synonymous SNV . 0 25 hm5C_associated_SNPs_51539 0 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:201845200-201845340
64251 chrX 100667839 100667839 1 + G T LUSC 100667836 + 100667816 100667856 41 GTCCAGTTTCCAGAGCACCACAGGGCACTGTGTACACATGA GTCCAGTTTCCAGAGCACCACAGTGCACTGTGTACACATGA < 41bp 0.850463621646578 0.525211934583041 0.3386441 0.18186596 prediction 0.650503374127074 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667836 chrX:100667839 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51540 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:100667797-100667881
64251 chr3 186505598 186505598 1 + G T UCEC 186505595 + 186505575 186505615 41 ATGCCATTGTGTTTCAGGCTCGCGGGATTGATGTGCAACAA ATGCCATTGTGTTTCAGGCTCGCTGGATTGATGTGCAACAA < 41bp 0.836954568721447 0.511713844371144 0.51355577 0.09392592 prediction 0.650481448700607 Functional Loss - EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186505595 chr3:186505598 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51542 0 0 31 SRSF1 POSTAR2 GSE83923,GSM2221665 chr3:186505580-186505600
64251 chr19 5668206 5668206 1 + G T LUSC 5668203 + 5668183 5668223 41 TTTGCCCCAGGCGGGGCCTCCCGGGGCCACCCCATCCCACA TTTGCCCCAGGCGGGGCCTCCCGTGGCCACCCCATCCCACA < 41bp 0.864827743789742 0.539624784046646 0.91797644 0.5460925 prediction 0.650405919486191 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5668203 chr19:5668206 synonymous SNV . 0 24 hm5C_associated_SNPs_51546 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:5668179-5668209
64251 chr6 43399993 43399993 1 + G T LUAD 43399990 + 43399970 43400010 41 TCTTCCAGTTGCTTTGCCACCAGGGGCAGGCCCAGGACCCA TCTTCCAGTTGCTTTGCCACCAGTGGCAGGCCCAGGACCCA < 41bp 0.871071049531186 0.54593320278577 0.91012454 0.5352807 prediction 0.650275693490833 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43399990 chr6:43399993 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_51552 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:43399980-43400000
64251 chr6 4892436 4892436 1 + G T LUAD 4892433 + 4892413 4892453 41 AGAAACTGGACCCCGTCGAGCAGGGTCAGGAGGACACAGTG AGAAACTGGACCCCGTCGAGCAGTGTCAGGAGGACACAGTG < 41bp 0.825086024632922 0.460126545151887 0.8940984 0.31923753 prediction 0.650172049265843 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892433 chr6:4892436 nonsynonymous SNV 0.882 2 24 hm5C_associated_SNPs_51556 0 0 9 GRWD1 POSTAR2 ENCODE chr6:4892351-4892481
64251 chr19 10398376 10398376 1 + G T LUSC 10398373 + 10398353 10398393 41 GCCTGGAGCGCTTCACCGGCCTGGATCTGGCCAACGTGACC GCCTGGAGCGCTTCACCGGCCTGTATCTGGCCAACGTGACC < 41bp 0.863012495743953 0.537950794405553 0.06572932 0.014955848 prediction 0.6501234026768 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398373 chr19:10398376 nonsynonymous SNV 0.054 1 24 hm5C_associated_SNPs_51558 0 0 1 SND1 POSTAR2 ENCODE chr19:10398355-10398393
64251 chr19 16962246 16962246 1 + G T LAML 16962243 + 16962223 16962263 41 TTCACAGGAAACGGGCCGTGCGAGATGCACAGCGTGCAGAA TTCACAGGAAACGGGCCGTGCGATATGCACAGCGTGCAGAA < 41bp 0.825026909656616 0.457264619790597 0.797542 0.2647515 prediction 0.650053819313232 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16962243 chr19:16962246 nonsynonymous SNV 0.614 0 24 hm5C_associated_SNPs_51561 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:16962222-16962246
64251 chr15 22848249 22848249 1 + G T LIHC 22848246 + 22848226 22848266 41 ATCTCATTTCAGGTTACTTTCAGGAGTGAAAAAGCTCTTTA ATCTCATTTCAGGTTACTTTCAGTAGTGAAAAAGCTCTTTA < 41bp 0.845741624653577 0.520735100099794 0.90739524 0.28502125 prediction 0.650013049107566 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22848246 chr15:22848249 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_51563 0 0 1 U2AF2 POSTAR2 ENCODE chr15:22848233-22848292
64251 chr18 32887072 32887072 1 + G T LUAD 32887069 + 32887049 32887089 41 TCTTCATCAGAGAATCCACACTGGAGAGAAACCTTATGCAT TCTTCATCAGAGAATCCACACTGTAGAGAAACCTTATGCAT < 41bp 0.824967536320815 0.482211548805205 0.08361447 0.024864197 prediction 0.649935072641629 Functional Loss - ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32887069 chr18:32887072 . . 0 24 hm5C_associated_SNPs_51565 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr18:32887020-32887073
64251 chr22 39428444 39428444 1 + G T rs577940875 39428441 + 39428421 39428461 41 TCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCCC TCCTGAGCCCCTCCTGGCCTCAGTGCCATTCCATAGTGCCC < 41bp 0.852640251137414 0.527731724954935 0.92298585 0.18039668 prediction 0.649817052364958 Functional Loss - APOBEC3D ENSG00000243811 UTR3 Human protein_coding chr22:39428441 chr22:39428444 . . 0 24 hm5C_associated_SNPs_51571 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:39428424-39428462
64251 chr7 100304462 100304462 1 + A C KIRC 100304458 + 100304438 100304478 41 CGCCAGGGCACACAGCATGGCAGAAAACCGAGAGCCCCGCG CGCCAGGGCACACAGCATGGCAGACAACCGAGAGCCCCGCG < 41bp 0.862931150221523 0.538169203659757 0.29123694 0.23910901 prediction 0.649523893123532 Functional Loss - POP7 ENSG00000172336 CDS Human protein_coding chr7:100304458 chr7:100304462 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_51581 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:100304460-100304480
64251 chr1 150305566 150305566 1 + A C STAD 150305562 + 150305542 150305582 41 TGAGAAGGCAAGGAAAGCAGCTGAACTGCAAGCTCGAATCC TGAGAAGGCAAGGAAAGCAGCTGACCTGCAAGCTCGAATCC < 41bp 0.824576432807378 0.429983948191137 0.65568423 0.3691994 prediction 0.649152865614756 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150305562 chr1:150305566 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_51593 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:150305527-150305570
64251 chr20 20007548 20007548 1 + A C COAD 20007544 + 20007524 20007564 41 CTGCTAAACTTATGGAGTTACTAGAGGAGATTTCAGAAAGG CTGCTAAACTTATGGAGTTACTAGCGGAGATTTCAGAAAGG < 41bp 0.824568257807812 0.43939640075436 0.54812145 0.13945311 prediction 0.649136515615624 Functional Loss - NAA20 ENSG00000173418 CDS Human protein_coding chr20:20007544 chr20:20007548 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_51597 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:20007519-20007552
64251 chr1 243449654 243449654 1 + A C HNSC 243449650 + 243449630 243449670 41 GCTCCAGCAACAGCTAAAATCTCAAAGACAAGAGGAGACAC GCTCCAGCAACAGCTAAAATCTCACAGACAAGAGGAGACAC < 41bp 0.824558578049774 0.417431406785151 0.84435093 0.26331705 prediction 0.649117156099548 Functional Loss - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243449650 chr1:243449654 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_51598 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:243449640-243449660
64251 chr11 126176481 126176481 1 + G T LUAD 126176478 + 126176458 126176498 41 CCCACAGGTGAATGAGGCCTCTGGGGATGGGGATGGAGAGG CCCACAGGTGAATGAGGCCTCTGTGGATGGGGATGGAGAGG < 41bp 0.870723478925862 0.546184234809554 0.88600767 0.4980852 prediction 0.649078488232616 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126176478 chr11:126176481 nonsynonymous SNV 0.101 1 24 hm5C_associated_SNPs_51600 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:126176471-126176507
64251 chr18 77805903 77805903 1 + G T UCEC 77805900 + 77805880 77805920 41 AGGAGGAAAGATAAAGGGCTCGGGGGCCTGGTGTGGCAGGG AGGAGGAAAGATAAAGGGCTCGGTGGCCTGGTGTGGCAGGG < 41bp 0.824483153085988 0.464689095592612 0.907303 0.40730113 prediction 0.648966306171977 Functional Loss - RBFA ENSG00000101546 CDS Human protein_coding chr18:77805900 chr18:77805903 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_51605 0 0 4 BUD13 POSTAR2 ENCODE chr18:77805901-77805965
64251 chr10 27459029 27459029 1 + A C UCEC 27459025 + 27459005 27459045 41 CATAACAGCAGTGCCCTTCCCACCACTGGACGCTCTTGTGT CATAACAGCAGTGCCCTTCCCACCCCTGGACGCTCTTGTGT < 41bp 0.824476463170211 0.414640816677829 0.13331759 0.12695137 prediction 0.648952926340422 Functional Loss - MASTL ENSG00000120539 CDS Human protein_coding chr10:27459025 chr10:27459029 nonsynonymous SNV 0.022 0 25 hm5C_associated_SNPs_51607 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:27459001-27459058
64251 chr9 126777416 126777416 1 + G T COAD 126777414 + 126777394 126777434 41 CCTACAGGCGCTTCTCTGTGCAGCGCTGCGCCCGCTGCCAC CCTACAGGCGCTTCTCTGTGCATCGCTGCGCCCGCTGCCAC < 41bp 0.826465831390606 0.502021182927132 0.8841233 0.3841064 prediction 0.648889296926947 Functional Loss - LHX2 ENSG00000106689 CDS Human protein_coding chr9:126777414 chr9:126777416 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_51610 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:126777411-126777461
64251 chr5 143586317 143586317 1 + G T UCEC 143586314 + 143586294 143586334 41 ACTGTAGTCGTTATTATCCTCGAGAACAAGGGTCCGCAGTT ACTGTAGTCGTTATTATCCTCGATAACAAGGGTCCGCAGTT < 41bp 0.824415362331032 0.486961205105969 0.41618723 0.09339255 prediction 0.648830724662063 Functional Loss - KCTD16 ENSG00000183775 CDS Human protein_coding chr5:143586314 chr5:143586317 stopgain 0.967 0 24 hm5C_associated_SNPs_51615 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:143586300-143586320
64251 chr5 147661765 147661765 1 + G T OV 147661762 + 147661742 147661782 41 GCCTCAAATGGCCACACTTTCCAGAATGAGTGTTTCTTTTG GCCTCAAATGGCCACACTTTCCATAATGAGTGTTTCTTTTG < 41bp 0.824374967238383 0.486707990914304 0.3405922 0.117449164 prediction 0.648749934476765 Functional Loss - SPINK13 ENSG00000214510 CDS Human protein_coding chr5:147661762 chr5:147661765 nonsynonymous SNV 0.834 2 24 hm5C_associated_SNPs_51619 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:147661760-147661840
64251 chr13 100518635 100518635 1 + G T UCEC 100518632 + 100518612 100518652 41 AGCTGGGCTGCTTAGACAGTCACGAGAAGGAGCCGCCATGG AGCTGGGCTGCTTAGACAGTCACTAGAAGGAGCCGCCATGG < 41bp 0.85732235932599 0.532950084478513 0.4617489 0.27807882 prediction 0.648744549694954 Functional Loss - CLYBL ENSG00000125246 CDS Human protein_coding chr13:100518632 chr13:100518635 nonsynonymous SNV 0.170 1 24 hm5C_associated_SNPs_51620 0 0 1 GRWD1 POSTAR2 ENCODE chr13:100518542-100518662
64251 chr13 31835151 31835151 1 + G T UCEC 31835148 + 31835128 31835168 41 ATTCACCATTATGCCTTTTCCGAGAATCCTACAGTTTTTAA ATTCACCATTATGCCTTTTCCGATAATCCTACAGTTTTTAA < 41bp 0.824360873144008 0.481357080398039 0.74195457 0.16376388 prediction 0.648721746288017 Functional Loss - B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31835148 chr13:31835151 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_51622 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:31835138-31835176
64251 chr17 79202877 79202877 1 - C A UCEC 79202880 - 79202860 79202900 41 CCTTGTTTGCTGGCATGGAGCTGGTGGCCTGTCCCCGCCTG CCTTGTTTGCTGGCATGGAGCTGTTGGCCTGTCCCCGCCTG < 41bp 0.867638312465084 0.543345572529388 0.44397962 0.18830508 prediction 0.648585479871392 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79202880 chr17:79202877 nonsynonymous SNV 0.898 3 24 hm5C_associated_SNPs_51626 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr17:79202858-79202885
64251 chr17 32957170 32957170 1 + G T LUSC 32957167 + 32957147 32957187 41 TCTGACAATGAAGACATCATCAAGGTGGGCATCCTGGAGGT TCTGACAATGAAGACATCATCAATGTGGGCATCCTGGAGGT < 41bp 0.824288587716428 0.462068399017701 0.8898511 0.34741503 prediction 0.648577175432856 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32957167 chr17:32957170 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_51627 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:32957143-32957170
64251 chr19 36278998 36278998 1 + G T HNSC 36278995 + 36278975 36279015 41 GTCAACCTAGCTCTAGGGCCCAGGGGTCCCTCACCTGCCTC GTCAACCTAGCTCTAGGGCCCAGTGGTCCCTCACCTGCCTC < 41bp 0.874927440606559 0.550687019524211 0.9507718 0.34567943 prediction 0.648480842164697 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278995 chr19:36278998 nonsynonymous SNV 0.930 1 24 hm5C_associated_SNPs_51632 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36278984-36279011
64251 chr11 65632610 65632610 1 + G T GBM 65632607 + 65632587 65632627 41 GACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCT GACTTCAACGCAGGAGCCATCAATAATAAGGTACTGTCTCT < 41bp 0.8501030731828 0.52593751830696 0.53409916 0.25447935 prediction 0.648331109751679 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632607 chr11:65632610 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_51636 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65632587-65632610
64251 chr1 229771125 229771125 1 + G T SARC 229771122 + 229771102 229771142 41 CCTGAGCTACTGTCATCCTACAAGGAGGGGCTCTTGGACCA CCTGAGCTACTGTCATCCTACAATGAGGGGCTCTTGGACCA < 41bp 0.824161580428636 0.457468451974778 0.42916238 0.040727615 prediction 0.648323160857271 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771122 chr1:229771125 nonsynonymous SNV 0.886 3 24 hm5C_associated_SNPs_51637 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:229771080-229771140
64251 chr19 44470534 44470534 1 + G T UCEC 44470531 + 44470511 44470551 41 AATGTGGGAAAGCCTTCATTCATGATTCACAGCTTCAAGAA AATGTGGGAAAGCCTTCATTCATTATTCACAGCTTCAAGAA < 41bp 0.8241393452947 0.468724085898664 0.06522301 0.042436033 prediction 0.6482786905894 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470531 chr19:44470534 nonsynonymous SNV 0.566 2 24 hm5C_associated_SNPs_51639 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44470498-44470536
64251 chr7 148481087 148481087 1 + A C LUAD 148481083 + 148481063 148481103 41 GCTTGTGGTCGCTTCATAAACAACAACGCGGTTACCAAGAT GCTTGTGGTCGCTTCATAAACAACCACGCGGTTACCAAGAT < 41bp 0.824125920267261 0.419435799917741 0.03287986 0.039172143 prediction 0.648251840534523 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148481083 chr7:148481087 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_51641 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:148481083-148481109
64251 chr9 130565267 130565267 1 + A C rs10760502 130565263 + 130565243 130565283 41 CTGGCAGCGGCGTCTGCGCGCGGCATAACGACCCAGGTCGC CTGGCAGCGGCGTCTGCGCGCGGCCTAACGACCCAGGTCGC < 41bp 0.824122624792367 0.487405185744145 0.8731458 0.8510825 prediction 0.648245249584733 Functional Loss - FPGS ENSG00000136877 CDS Human protein_coding chr9:130565263 chr9:130565267 nonsynonymous SNV 0.020 0 25 hm5C_associated_SNPs_51642 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:130565266-130565267
64251 chr4 25334976 25334976 1 + G T UCEC 25334973 + 25334953 25334993 41 CTCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGTA CTCCTTTATCCACTGGAAAACAATAAGACAAATGCCCAGTA < 41bp 0.853247330978013 0.529152649851542 0.3377035 0.13178 prediction 0.648189362252941 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25334973 chr4:25334976 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_51645 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:25334939-25334976
64251 chr10 7839091 7839091 1 + G T KIRC 7839088 + 7839068 7839108 41 GGTAGCGGCAGCAAAATATGCCCGAGCTGAGAGAGAGCTGA GGTAGCGGCAGCAAAATATGCCCTAGCTGAGAGAGAGCTGA < 41bp 0.82408256598157 0.480539385533582 0.07185441 0.03611079 prediction 0.648165131963139 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7839088 chr10:7839091 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_51647 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:7839060-7839100
64251 chr22 38212280 38212280 1 + G T LUAD 38212277 + 38212257 38212297 41 ACCCCATCTGCCCTGTGATGCTGGGTGATGCCCGGCTGGCC ACCCCATCTGCCCTGTGATGCTGTGTGATGCCCGGCTGGCC < 41bp 0.873975744081609 0.54991267523797 0.90917385 0.40657994 prediction 0.648126137687277 Functional Loss - GCAT ENSG00000100116 CDS Human protein_coding chr22:38212277 chr22:38212280 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51649 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:38212250-38212283
64251 chr11 82874805 82874805 1 + G T LUAD 82874802 + 82874782 82874822 41 CTTTGAAGAAACTTTATGCCCTGGATGTCAGAGTCAATTCA CTTTGAAGAAACTTTATGCCCTGTATGTCAGAGTCAATTCA < 41bp 0.848450509618856 0.524409854698213 0.013187826 0.003939122 prediction 0.648081309841287 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82874802 chr11:82874805 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51650 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:82874789-82874817
64251 chrX 47044595 47044595 1 + G T LUAD 47044592 + 47044572 47044612 41 CAGATGCTGGCTATGCCATCCTCGAGAAGAAGGTGTGTTGG CAGATGCTGGCTATGCCATCCTCTAGAAGAAGGTGTGTTGG < 41bp 0.851424076924452 0.527486198970815 0.7927706 0.90875995 prediction 0.647875755907274 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47044592 chrX:47044595 stopgain 0.988 1 24 hm5C_associated_SNPs_51656 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chrX:47044577-47044595
64251 chr22 50946857 50946857 1 + G T READ 50946854 + 50946834 50946874 41 AGGTGGACGTGGCGGCCCAGCTGGGCGAGTATCTGGAGGAG AGGTGGACGTGGCGGCCCAGCTGTGCGAGTATCTGGAGGAG < 41bp 0.856691340993347 0.532764261688878 0.5676472 0.11043757 prediction 0.647854158608939 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50946854 chr22:50946857 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51658 0 0 2 DDX3X POSTAR2 ENCODE chr22:50946725-50946868
64251 chr19 37118056 37118056 1 + G T UCEC 37118053 + 37118033 37118073 41 GAGTGTGGGAAGGCATTTATCCAGAAGACAACCCTCACTGT GAGTGTGGGAAGGCATTTATCCATAAGACAACCCTCACTGT < 41bp 0.857478650784542 0.533576456489215 0.8589318 0.06766677 prediction 0.647804388590653 Functional Loss - ZNF382 ENSG00000161298 CDS Human protein_coding chr19:37118053 chr19:37118056 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51660 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:37118045-37118072
64251 chr17 38445734 38445734 1 + G T LUSC 38445731 + 38445711 38445751 41 TTTTCCAAAAAGGAAGCTGTCTCGGGCATTGAACAAAGCTA TTTTCCAAAAAGGAAGCTGTCTCTGGCATTGAACAAAGCTA < 41bp 0.82388088241717 0.48494489073085 0.08794141 0.04700902 prediction 0.647761764834341 Functional Loss - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38445731 chr17:38445734 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_51661 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38445702-38445760
64251 chr5 176079789 176079789 1 + G T UCEC 176079787 + 176079767 176079807 41 CTTCTTCCTGGAGCTGGCAACAGGGATCCTGGCCTTTGTCT CTTCTTCCTGGAGCTGGCAACATGGATCCTGGCCTTTGTCT < 41bp 0.829029857050864 0.505154101587059 0.89511555 0.3281683 prediction 0.647751510927609 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079787 chr5:176079789 nonsynonymous SNV 0.959 5 23 hm5C_associated_SNPs_51662 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:176079760-176079789
64251 chr5 158695986 158695986 1 + A C UCEC 158695982 + 158695962 158696002 41 GTATTCAGTGACCACACTTTCAGAAGATGATACTGTGCTCG GTATTCAGTGACCACACTTTCAGACGATGATACTGTGCTCG < 41bp 0.868961317022649 0.545107558499819 0.9105872 0.89829665 prediction 0.647707517045661 Functional Loss - UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158695982 chr5:158695986 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_51665 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:158695960-158695987
64251 chr16 28507081 28507081 1 + G T UCEC 28507078 + 28507058 28507098 41 TGCAGGGGAAACTGAGGAGCCTGGGGCCGAAGGGGCTGGGA TGCAGGGGAAACTGAGGAGCCTGTGGCCGAAGGGGCTGGGA < 41bp 0.871993014179811 0.548178021693995 0.89674574 0.5215304 prediction 0.647629984971633 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507078 chr16:28507081 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_51667 0 0 3 AARS POSTAR2 ENCODE chr16:28507060-28507090
64251 chr19 49674973 49674973 1 + G T UCEC 49674970 + 49674950 49674990 41 GAGCCAGGCAAGGCGAAGCCCGAGATCGAATCAGGCGTTTC GAGCCAGGCAAGGCGAAGCCCGATATCGAATCAGGCGTTTC < 41bp 0.823713939638853 0.461685887700571 0.36718696 0.14130145 prediction 0.647427879277706 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49674970 chr19:49674973 nonsynonymous SNV 0.487 2 24 hm5C_associated_SNPs_51674 0 0 1 SRSF1 POSTAR2 ENCODE chr19:49674898-49674974
64251 chr20 34526626 34526626 1 + G T LUAD 34526623 + 34526603 34526643 41 TTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCG TTTGTCCTCTCAACAGAAGCCGGTAGCATCCTGATCTGCCG < 41bp 0.860002479884817 0.536291153071287 0.7523564 0.2604158 prediction 0.647422653627059 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526623 chr20:34526626 stopgain 1.000 1 24 hm5C_associated_SNPs_51676 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr20:34526620-34526640
64251 chr1 161089103 161089103 1 + G T THCA 161089100 + 161089080 161089120 41 TGAGGCATTTGACTTCATTGCACGGGACCCTGCAGAGACGC TGAGGCATTTGACTTCATTGCACTGGACCCTGCAGAGACGC < 41bp 0.866258195310534 0.542575181768869 0.5043073 0.17659691 prediction 0.647366027083331 Functional Loss - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161089100 chr1:161089103 nonsynonymous SNV 0.922 1 24 hm5C_associated_SNPs_51677 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:161089090-161089114
64251 chr20 61458637 61458637 1 + G T SARC 61458634 + 61458614 61458654 41 CCAGAAGGGTTCCGCGGCCCCAAGGGTGACCTCGTAAGTGA CCAGAAGGGTTCCGCGGCCCCAATGGTGACCTCGTAAGTGA < 41bp 0.870047398257439 0.546390552097015 0.88845503 0.21715736 prediction 0.647313692320849 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61458634 chr20:61458637 nonsynonymous SNV 0.963 3 24 hm5C_associated_SNPs_51683 0 0 9 BUD13 POSTAR2 ENCODE chr20:61458596-61458642
64251 chr16 2283161 2283161 1 + G T UCEC 2283158 + 2283138 2283178 41 TCCAGATGCAGGAGCTGTCCCTGGGCATGAAAGCCCTGGCC TCCAGATGCAGGAGCTGTCCCTGTGCATGAAAGCCCTGGCC < 41bp 0.869836622384515 0.546205727701411 0.79968846 0.17499706 prediction 0.647261789366207 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2283158 chr16:2283161 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_51688 0 0 5 GRWD1 POSTAR2 ENCODE chr16:2283055-2283181
64251 chrX 71416699 71416699 1 + G T LUSC 71416696 + 71416676 71416716 41 AGCCATGGAAAAGTTAAAGTCTGGGATGAGATTCAATGAAG AGCCATGGAAAAGTTAAAGTCTGTGATGAGATTCAATGAAG < 41bp 0.853741893530977 0.530127117229846 0.45561457 0.16083759 prediction 0.647229552602262 Functional Loss - PIN4 ENSG00000102309 CDS Human protein_coding chrX:71416696 chrX:71416699 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51689 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704215 chrX:71416680-71416700
64251 chr16 67660532 67660532 1 + G T UCEC 67660529 + 67660509 67660549 41 GTTACTGTGATGCTGTGTTTCATGAGCGCTATGCCCTCATC GTTACTGTGATGCTGTGTTTCATTAGCGCTATGCCCTCATC < 41bp 0.82359953539561 0.467915450339648 0.4151138 0.12995878 prediction 0.647199070791219 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67660529 chr16:67660532 stopgain 1.000 1 24 hm5C_associated_SNPs_51693 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:67660485-67660540
64251 chr5 21459682 21459682 1 + G T LUAD 21459679 + 21459659 21459699 41 GCGGCCAGCCATGGAGCGCTCTGGGCCCAGCGAAGGTGGGT GCGGCCAGCCATGGAGCGCTCTGTGCCCAGCGAAGGTGGGT < 41bp 0.843941956896718 0.520367789861635 0.49590918 0.1081776 prediction 0.647148334070166 Functional Loss - GUSBP1 ENSG00000183666 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr5:21459679 chr5:21459682 . . 0 24 hm5C_associated_SNPs_51694 0 0 4 DDX3X POSTAR2 ENCODE chr5:21459629-21459689
64251 chr3 129238491 129238491 1 + G T PAAD 129238488 + 129238468 129238508 41 AGCCGCCGGGATGTCCTCATCAAGCGATGGCCCCCACCCCT AGCCGCCGGGATGTCCTCATCAATCGATGGCCCCCACCCCT < 41bp 0.823570284861839 0.483117462249367 0.90156746 0.3473337 prediction 0.647140569723678 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129238488 chr3:129238491 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51697 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:129238460-129238491
64251 chrX 48681420 48681420 1 + G T UCEC 48681417 + 48681397 48681437 41 TAGCTGAGCGGATGACCACACGAGAAAAGAAGGTTCTGGAA TAGCTGAGCGGATGACCACACGATAAAAGAAGGTTCTGGAA < 41bp 0.82352496902166 0.490346277140456 0.7867712 0.7460826 prediction 0.647049938043319 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681417 chrX:48681420 stopgain 0.032 0 24 hm5C_associated_SNPs_51699 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:48681386-48681438
64251 chr11 82877101 82877101 1 + G T READ 82877098 + 82877078 82877118 41 ACACAAAAGACTTGAAAAATCAAGAATCGGAAAGTATGAGG ACACAAAAGACTTGAAAAATCAATAATCGGAAAGTATGAGG < 41bp 0.829570209195914 0.506085103298559 0.2783489 0.29440752 prediction 0.646970211794708 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82877098 chr11:82877101 stopgain 1.000 1 24 hm5C_associated_SNPs_51700 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:82877092-82877134
64251 chr16 67236569 67236569 1 + G T TGCT 67236566 + 67236546 67236586 41 GGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCCCACTTCC GGGAGCAGCTGGCCCGCACTCTGTCCCTGAAGCCCACTTCC < 41bp 0.875981712461834 0.552551263463015 0.9035505 0.49634385 prediction 0.646860897997638 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67236566 chr16:67236569 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_51711 0 0 2 PPIG POSTAR2 ENCODE chr16:67236544-67236570
64251 chr2 3461464 3461464 1 + G T SARC 3461461 + 3461441 3461481 41 GCGTGACTCAGGAGGGCAGACAAGGTGGGTCGGCCGGACTT GCGTGACTCAGGAGGGCAGACAATGTGGGTCGGCCGGACTT < 41bp 0.865334720737429 0.541931426962254 0.90403646 0.7442198 prediction 0.646806587550351 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3461461 chr2:3461464 nonsynonymous SNV 0.322 2 24 hm5C_associated_SNPs_51713 0 0 4 BUD13 POSTAR2 ENCODE chr2:3461387-3461472
64251 chr2 219300044 219300044 1 + G T UCEC 219300041 + 219300021 219300061 41 GGGGACGAGCGGGAGATGGCCAAGATGGTTGCTGACACCAT GGGGACGAGCGGGAGATGGCCAATATGGTTGCTGACACCAT < 41bp 0.87264737600218 0.549264205552476 0.8176614 0.57548726 prediction 0.646766340899408 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219300041 chr2:219300044 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51714 0 0 3 EFTUD2 POSTAR2 ENCODE chr2:219300043-219300103
64251 chr15 66811350 66811350 1 + G T LUAD 66811347 + 66811327 66811367 41 ATCCTGAAGGTACTTGTTGGCTAGGAGCTGAGCTTATCACA ATCCTGAAGGTACTTGTTGGCTATGAGCTGAGCTTATCACA < 41bp 0.823359182829528 0.475675464620919 0.12825507 0.05813998 prediction 0.646718365659055 Functional Loss - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66811347 chr15:66811350 stopgain 0.994 1 24 hm5C_associated_SNPs_51717 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:66811350-66811376
64251 chr7 76112318 76112318 1 + G T LUAD 76112315 + 76112295 76112335 41 TACAACAAACCCTCACTCTCCGGGGCCCGGTCTGCGCCCAG TACAACAAACCCTCACTCTCCGGTGCCCGGTCTGCGCCCAG < 41bp 0.823353419173152 0.460297257323794 0.9422732 0.8912331 prediction 0.646706838346303 Functional Loss - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112315 chr7:76112318 synonymous SNV . 0 24 hm5C_associated_SNPs_51719 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:76112283-76112338
64251 chr5 138268365 138268365 1 + G T COAD 138268362 + 138268342 138268382 41 ATCTGCAGCAAGGTCAAGGCCGAGGTGCAGAATCTCGGCGG ATCTGCAGCAAGGTCAAGGCCGATGTGCAGAATCTCGGCGG < 41bp 0.866537807688653 0.543185765163128 0.83378553 0.24606201 prediction 0.64670408505105 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138268362 chr5:138268365 nonsynonymous SNV 0.910 1 24 hm5C_associated_SNPs_51720 0 0 4 FMR1 POSTAR2 ENCODE chr5:138268325-138268381
64251 chrX 64957192 64957192 1 + G T UCEC 64957189 + 64957169 64957209 41 CCCGGGACCAGAAAAAGACTCAGGAACAGCTGGTAAAGCTG CCCGGGACCAGAAAAAGACTCAGTAACAGCTGGTAAAGCTG < 41bp 0.870463356842852 0.547186725309042 0.8498598 0.2564631 prediction 0.646553263067619 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64957189 chrX:64957192 stopgain 1.000 1 24 hm5C_associated_SNPs_51726 0 0 6 FMR1 POSTAR2 ENCODE chrX:64957177-64957200
64251 chr8 94752736 94752736 1 + G T CESC 94752733 + 94752713 94752753 41 AAACATTCCACCCTAACTCGCCAGAGGGTGAACTGCCCCCA AAACATTCCACCCTAACTCGCCATAGGGTGAACTGCCCCCA < 41bp 0.830796910551023 0.507533271066668 0.9016185 0.63814104 prediction 0.646527278968712 Functional Loss - RBM12B-AS1 ENSG00000212998 CDS Human other chr8:94752733 chr8:94752736 stopgain . 0 24 hm5C_associated_SNPs_51727 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:94752732-94752770
64251 chr7 142962282 142962282 1 + G T UCEC 142962279 + 142962259 142962299 41 GGGTCATGATCCTGCCCCCGCCCGGGGGATCTACTGTCCTC GGGTCATGATCCTGCCCCCGCCCTGGGGATCTACTGTCCTC < 41bp 0.823251899184438 0.452609279979883 0.31247985 0.16836694 prediction 0.646503798368875 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962279 chr7:142962282 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_51728 0 0 8 BUD13 POSTAR2 ENCODE chr7:142962265-142962287
64251 chr8 145584592 145584592 1 + G T SKCM 145584589 + 145584569 145584609 41 CCATCCAGGTGGGCTCTCTGCTCGGCGCTGTTGCTATGTTC CCATCCAGGTGGGCTCTCTGCTCTGCGCTGTTGCTATGTTC < 41bp 0.856777562807207 0.533562637065705 0.5850914 0.27414602 prediction 0.646429851483004 Functional Loss - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145584589 chr8:145584592 nonsynonymous SNV 0.074 5 24 hm5C_associated_SNPs_51732 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145584577-145584644
64251 chr4 124323424 124323424 1 + G T STAD 124323421 + 124323401 124323441 41 GGAACCTGCATGTGCTTAGTCAAGGGCATCTTCTACCACTG GGAACCTGCATGTGCTTAGTCAATGGCATCTTCTACCACTG < 41bp 0.873222406962311 0.550026257842148 0.8923811 0.40042204 prediction 0.646392298240326 Functional Loss - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323421 chr4:124323424 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51733 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:124323421-124323436
64251 chr1 44438134 44438134 1 + G T STAD 44438131 + 44438111 44438151 41 GGCAAGGGCTGGAGCCCCGCCTGGGTCAGACGCCAGTGACA GGCAAGGGCTGGAGCCCCGCCTGTGTCAGACGCCAGTGACA < 41bp 0.82318779115987 0.459599911082226 0.8255453 0.13896543 prediction 0.646375582319739 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44438131 chr1:44438134 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51734 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44438114-44438149
64251 chr7 75614270 75614270 1 + G T UCEC 75614267 + 75614247 75614287 41 AAGATGGCCTCCTCCTCCGGCGAGGGCAAGGTGCGCCCCCT AAGATGGCCTCCTCCTCCGGCGATGGCAAGGTGCGCCCCCT < 41bp 0.82313228516502 0.468709055419696 0.8419611 0.16760087 prediction 0.64626457033004 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75614267 chr7:75614270 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_51739 0 0 4 RPS3 POSTAR2 ENCODE chr7:75614236-75614277
64251 chr13 114193789 114193789 1 + G T THCA 114193786 + 114193766 114193806 41 CCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTT CCACCTCCATCGAACCCATCCGCTACTTCCTGGCCATCGTT < 41bp 0.864888627481009 0.54177895384054 0.23069331 0.09973556 prediction 0.646219347280938 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114193786 chr13:114193789 nonsynonymous SNV 0.745 4 24 hm5C_associated_SNPs_51741 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr13:114193778-114193804
64251 chr14 24026169 24026169 1 + G T LUAD 24026166 + 24026146 24026186 41 TGGATGGGAGCTCAAATGTCCTGGAGCAGCAGGTGTCTTAG TGGATGGGAGCTCAAATGTCCTGTAGCAGCAGGTGTCTTAG < 41bp 0.823078194843427 0.482225031615624 0.6525279 0.22422466 prediction 0.646156389686855 Functional Loss - THTPA ENSG00000259431 CDS Human protein_coding chr14:24026166 chr14:24026169 nonsynonymous SNV 0.974 3 24 hm5C_associated_SNPs_51746 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:24026166-24026201
64251 chr19 54656706 54656706 1 + G T UCEC 54656703 + 54656683 54656723 41 TTCTACCAGCGCCTGTCGACCGAGACACTCTTCTTCATCTT TTCTACCAGCGCCTGTCGACCGATACACTCTTCTTCATCTT < 41bp 0.822984086743465 0.46179836123683 0.45585433 0.25476468 prediction 0.645968173486931 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656703 chr19:54656706 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_51754 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54656706-54656733
64251 chr2 131976266 131976266 1 + G T UCEC 131976263 + 131976243 131976283 41 GCTATGAAGACACTCAGGAACAAGATGGGGAAGTGGTGCTG GCTATGAAGACACTCAGGAACAATATGGGGAAGTGGTGCTG < 41bp 0.852955652709439 0.529981258011022 0.7311102 0.22663501 prediction 0.645948789396832 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976263 chr2:131976266 nonsynonymous SNV 0.015 1 24 hm5C_associated_SNPs_51755 0 0 9 DDX24 POSTAR2 ENCODE chr2:131976256-131976375
64251 chr1 114483281 114483281 1 + G T STAD 114483278 + 114483258 114483298 41 GTTGTAACAGCCGCTGATAGCTCGGGCAGTGCTGCTACATC GTTGTAACAGCCGCTGATAGCTCTGGCAGTGCTGCTACATC < 41bp 0.822954906353933 0.461679569656022 0.67436075 0.36864004 prediction 0.645909812707867 Functional Loss - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483278 chr1:114483281 synonymous SNV . 0 24 hm5C_associated_SNPs_51757 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:114483273-114483292
64251 chr18 33779917 33779917 1 + G T LUSC 33779914 + 33779894 33779934 41 GTAGTGCTTCAGCCAGCAACCCAGACTGCCAGCTGCCGCAT GTAGTGCTTCAGCCAGCAACCCATACTGCCAGCTGCCGCAT < 41bp 0.822942582393052 0.452046743216851 0.4405702 0.25321722 prediction 0.645885164786103 Functional Loss - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33779914 chr18:33779917 nonsynonymous SNV 0.456 1 24 hm5C_associated_SNPs_51759 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:33779917-33779949
64251 chr10 13687075 13687075 1 + G T rs567837967 13687072 + 13687052 13687092 41 TGTCCCTGCCGGGTCCCGGCCAGGTGTGTGTGTGCCCCAGC TGTCCCTGCCGGGTCCCGGCCAGTTGTGTGTGTGCCCCAGC < 41bp 0.850934189465878 0.528031920437346 0.91802865 0.31725594 prediction 0.645804538057065 Functional Loss - FRMD4A ENSG00000151474 UTR3 Human protein_coding chr10:13687072 chr10:13687075 . . 0 24 hm5C_associated_SNPs_51763 0 0 1 BUD13 POSTAR2 ENCODE chr10:13687023-13687114
64251 chr16 30964852 30964852 1 + G T LUAD 30964850 + 30964830 30964870 41 ACCCCCATGGTGCCCACATCCCGGGTGCCCGGGACTCTGGC ACCCCCATGGTGCCCACATCCCTGGTGCCCGGGACTCTGGC < 41bp 0.825939443802619 0.503085786197361 0.8260088 0.07066706 prediction 0.645707315210515 Functional Loss - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964850 chr16:30964852 nonsynonymous SNV 0.402 1 23 hm5C_associated_SNPs_51766 0 0 3 RBM15 POSTAR2 ENCODE chr16:30964799-30964852
64251 chr8 124157050 124157050 1 + G T LUSC 124157047 + 124157027 124157067 41 CTAGAAAGTGGTTTTTAAAGCAAGAGATAAATGCGGCTGTA CTAGAAAGTGGTTTTTAAAGCAATAGATAAATGCGGCTGTA < 41bp 0.840994603479547 0.518147501291045 0.91638726 0.8833938 prediction 0.645694204377005 Functional Loss - TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124157047 chr8:124157050 stopgain 0.148 0 24 hm5C_associated_SNPs_51768 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:124157040-124157060
64251 chrX 77380864 77380864 1 + G T HNSC 77380861 + 77380841 77380881 41 ACTTGCTGTGCCAAATGGAACACGGAGGATAAAGTCAGCCA ACTTGCTGTGCCAAATGGAACACTGAGGATAAAGTCAGCCA < 41bp 0.822792142177447 0.464603891952401 0.29553515 0.07137725 prediction 0.645584284354895 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380861 chrX:77380864 synonymous SNV . 0 24 hm5C_associated_SNPs_51774 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:77380821-77380870
64251 chrX 105855401 105855401 1 + G T UCEC 105855398 + 105855378 105855418 41 AGAGGAATCGGGCTGGGGTCCCGGGAGGGGTGATCCGAAGA AGAGGAATCGGGCTGGGGTCCCGTGAGGGGTGATCCGAAGA < 41bp 0.866774133746951 0.543983839884339 0.9142628 0.67586213 prediction 0.645580587725224 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855398 chrX:105855401 stopgain 0.797 0 24 hm5C_associated_SNPs_51775 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:105855383-105855402
64251 chr2 220370084 220370084 1 + G T LUSC 220370081 + 220370061 220370101 41 CTGGAGTCAGATCAAGTCCGCAGGGTATGGAAGGCTGGGTC CTGGAGTCAGATCAAGTCCGCAGTGTATGGAAGGCTGGGTC < 41bp 0.822778142344607 0.451394752002576 0.9242448 0.8775179 prediction 0.645556284689214 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220370081 chr2:220370084 nonsynonymous SNV 0.976 4 24 hm5C_associated_SNPs_51777 0 0 1 DDX24 POSTAR2 ENCODE chr2:220370066-220370085
64251 chrX 47044477 47044477 1 + G T LUAD 47044474 + 47044454 47044494 41 ATTGCCAAGGACATGGAACGCTGGGCCCGCAGTCTCAACAA ATTGCCAAGGACATGGAACGCTGTGCCCGCAGTCTCAACAA < 41bp 0.876407024209168 0.55372114409468 0.4303107 0.20619193 prediction 0.645371760228975 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47044474 chrX:47044477 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_51782 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:47044451-47044494
64251 chr10 70532808 70532808 1 + G T UCEC 70532805 + 70532785 70532825 41 AAACTGAAGAAGATAACAATCAAGATGAATATGACCCTATG AAACTGAAGAAGATAACAATCAATATGAATATGACCCTATG < 41bp 0.825286864127639 0.502611670238501 0.84394425 0.089312434 prediction 0.645350387778276 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70532805 chr10:70532808 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51784 0 0 35 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:70532740-70532820
64251 chr17 34912947 34912947 1 + G T DLBC 34912944 + 34912924 34912964 41 GACATGGTATGCTTAAGCAACAGGATCTAAGTATTGCCATG GACATGGTATGCTTAAGCAACAGTATCTAAGTATTGCCATG < 41bp 0.857658797509523 0.534994001223528 0.17222002 0.046741575 prediction 0.645329592571991 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34912944 chr17:34912947 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_51786 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:34912929-34912949
64251 chrX 23685884 23685884 1 + G T LUAD 23685881 + 23685861 23685901 41 AGTGTACCCGGGAGAGGCATCCCGGGTATCGGTCGCCGACC AGTGTACCCGGGAGAGGCATCCCTGGTATCGGTCGCCGACC < 41bp 0.822613678383296 0.462259159210651 0.9232217 0.3786369 prediction 0.645227356766593 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685881 chrX:23685884 nonsynonymous SNV 0.849 2 24 hm5C_associated_SNPs_51789 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:23685858-23685896
64251 chr19 39123113 39123113 1 + G T SARC 39123110 + 39123090 39123130 41 GGACCTCTTGGAAGGTATAACTGGCTTTGAAGACTCTGTCC GGACCTCTTGGAAGGTATAACTGTCTTTGAAGACTCTGTCC < 41bp 0.822605682110908 0.456999941213456 0.32599008 0.12145713 prediction 0.645211364221816 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39123110 chr19:39123113 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51791 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39123024-39123123
64251 chr1 32622963 32622963 1 + G T BLCA 32622960 + 32622940 32622980 41 GTTCTAGGAGAGTGTGATCACAAGAGAGATGGTGGAGATGC GTTCTAGGAGAGTGTGATCACAATAGAGATGGTGGAGATGC < 41bp 0.82259303910794 0.475919391344153 0.49064052 0.19582891 prediction 0.645186078215879 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32622960 chr1:32622963 nonsynonymous SNV 0.970 1 24 hm5C_associated_SNPs_51794 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:32622954-32622991
64251 chr7 6628287 6628287 1 + G T LUAD 6628284 + 6628264 6628304 41 TTCCACGGATTGTCTTCATGCTGGGCTTTGTCGTGGTTCTG TTCCACGGATTGTCTTCATGCTGTGCTTTGTCGTGGTTCTG < 41bp 0.822577392224543 0.458157346922564 0.40061787 0.11807546 prediction 0.645154784449085 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628284 chr7:6628287 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_51797 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6628259-6628340
64251 chr3 195385028 195385028 1 + G T rs562577266 195385025 + 195385005 195385045 41 CTCGGCGCTTGGCGCTGGCGCTGGCCAAGGCGGTGAGTCCC CTCGGCGCTTGGCGCTGGCGCTGTCCAAGGCGGTGAGTCCC < 41bp 0.840121614293857 0.517572319390265 0.74106586 0.53798825 prediction 0.645098589807185 Functional Loss - SDHAP2 ENSG00000215837;ENSG00000242086 ncRNA_exonic Human other chr3:195385025 chr3:195385028 . . 0 24 hm5C_associated_SNPs_51802 0 0 1 DDX3X POSTAR2 ENCODE chr3:195384979-195385034
64251 chr9 114423979 114423979 1 + G T SARC 114423976 + 114423956 114423996 41 AGAGCAGCTCAAGTTGGAGGCTGGCGTGGAGAGGATCAAGG AGAGCAGCTCAAGTTGGAGGCTGTCGTGGAGAGGATCAAGG < 41bp 0.832279557436819 0.509746232405355 0.83312577 0.5800339 prediction 0.645066650062928 Functional Loss - GNG10 ENSG00000242616 CDS Human protein_coding chr9:114423976 chr9:114423979 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_51803 0 0 3 DDX3X POSTAR2 ENCODE chr9:114423872-114423984
64251 chr7 35913313 35913313 1 + G T LUAD 35913310 + 35913290 35913330 41 GGACTACCTAAATGCAGAATCACGAGTGAACAGACGTCAGA GGACTACCTAAATGCAGAATCACTAGTGAACAGACGTCAGA < 41bp 0.82247349781637 0.477398272652571 0.22623426 0.019704312 prediction 0.64494699563274 Functional Loss - SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35913310 chr7:35913313 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_51807 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:35913268-35913318
64251 chr20 49575390 49575390 1 + G T LUSC 49575387 + 49575367 49575407 41 GGAAGAGGTCGCCATGGCTTCCCGGGAGGAGGTACTCGCCT GGAAGAGGTCGCCATGGCTTCCCTGGAGGAGGTACTCGCCT < 41bp 0.822444624325646 0.484684555243317 0.27771035 0.08018562 prediction 0.644889248651292 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575387 chr20:49575390 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_51811 0 0 3 DDX3X POSTAR2 ENCODE chr20:49575374-49575454
64251 chr21 34805103 34805103 1 - C A BLCA 34805106 - 34805086 34805126 41 AGGCCTCTATATTTCAGGACCAGGAAGAAACAGGCTCCTGC AGGCCTCTATATTTCAGGACCAGTAAGAAACAGGCTCCTGC < 41bp 0.85782512757213 0.535389532287213 0.23814955 0.19175836 prediction 0.644871190569835 Functional Loss - IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34805106 chr21:34805103 nonsynonymous SNV 0.991 0 24 hm5C_associated_SNPs_51812 0 0 4 BUD13 POSTAR2 ENCODE chr21:34805045-34805116
64251 chr1 25611101 25611101 1 + G T rs199509194 25611098 + 25611078 25611118 41 ACCGTGATGGCGGCCATTGGCTTGGGCTTCCTCACCTCGAG ACCGTGATGGCGGCCATTGGCTTTGGCTTCCTCACCTCGAG < 41bp 0.870975578905563 0.548561088634212 0.4601049 0.2123422 prediction 0.644828980542701 Functional Loss - RHD ENSG00000187010 CDS Human protein_coding chr1:25611098 chr1:25611101 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_51815 0 0 3 BUD13 POSTAR2 ENCODE chr1:25611034-25611104
64251 chr12 6646827 6646827 1 + G T UCEC 6646824 + 6646804 6646844 41 AAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACATCAT AAACTGTGGCGTGATGGCCGCGGTGCTCTCCAGAACATCAT < 41bp 0.873970282634355 0.551565229389308 0.8965599 0.22647324 prediction 0.644810106490095 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646824 chr12:6646827 synonymous SNV . 0 24 hm5C_associated_SNPs_51816 0 0 44 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr12:6646779-6646849
64251 chr9 136302943 136302943 1 + G T LUSC 136302940 + 136302920 136302960 41 TGAAGCGTGGAGACAGCTTCCTCGATGGGACCCGGTGTATG TGAAGCGTGGAGACAGCTTCCTCTATGGGACCCGGTGTATG < 41bp 0.822403863789254 0.491161566147586 0.24951124 0.9285033 prediction 0.644807727578508 Functional Loss - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136302940 chr9:136302943 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_51817 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:136302929-136302953
64251 chr9 127119096 127119096 1 - C A UCEC 127119099 - 127119079 127119119 41 ATTGACCTCTGCGTCATCAGCAAGAACAAGCTGGATTTTCT ATTGACCTCTGCGTCATCAGCAATAACAAGCTGGATTTTCT < 41bp 0.86240358912429 0.540003117067601 0.29972395 0.11941865 prediction 0.644800944113379 Functional Loss - PSMB7 ENSG00000136930 CDS Human protein_coding chr9:127119099 chr9:127119096 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_51818 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:127119068-127119143
64251 chr3 97510649 97510649 1 + G T LUSC 97510646 + 97510626 97510666 41 CCATAAAAGGAGAAGGCTTGCAAGAAGGTGTAGACTGGCTT CCATAAAAGGAGAAGGCTTGCAATAAGGTGTAGACTGGCTT < 41bp 0.82238041079167 0.489688978255404 0.21836159 0.11183542 prediction 0.644760821583341 Functional Loss - ARL6 ENSG00000113966 CDS Human protein_coding chr3:97510646 chr3:97510649 stopgain 0.999 1 24 hm5C_associated_SNPs_51819 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:97510632-97510658
64251 chr18 9513092 9513092 1 + A C LUSC 9513088 + 9513068 9513108 41 ACCAGCAGCCCCAGTGAACACCGCAGGGTGGAGCATGGCAG ACCAGCAGCCCCAGTGAACACCGCCGGGTGGAGCATGGCAG < 41bp 0.889092243956894 0.566735188365911 0.7778964 0.6182381 prediction 0.644714111181967 Functional Loss - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9513088 chr18:9513092 synonymous SNV . 0 25 hm5C_associated_SNPs_51822 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr18:9513091-9513092
64251 chr3 12858058 12858058 1 + G T LUAD 12858055 + 12858035 12858075 41 ACAAGATTGCAGCCGAGGCCCTGGTGGTGCTGCAGGAGCTG ACAAGATTGCAGCCGAGGCCCTGTTGGTGCTGCAGGAGCTG < 41bp 0.82234262121692 0.447532988982091 0.24958944 0.105757505 prediction 0.644685242433839 Functional Loss - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858055 chr3:12858058 nonsynonymous SNV 0.897 0 24 hm5C_associated_SNPs_51823 0 0 1 RBM15 POSTAR2 ENCODE chr3:12858022-12858091
64251 chrX 48434753 48434753 1 + G T CHOL 48434750 + 48434730 48434770 41 ATCATGCAGGCAAGTCTGCTCGGGGAACCAGAGGAGGTGGC ATCATGCAGGCAAGTCTGCTCGGTGAACCAGAGGAGGTGGC < 41bp 0.873942380592668 0.551631578103242 0.91138816 0.5283115 prediction 0.644621604978853 Functional Loss - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48434750 chrX:48434753 stopgain 0.999 0 24 hm5C_associated_SNPs_51826 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48434739-48434762
64251 chrX 135586595 135586595 1 + G T UCEC 135586592 + 135586572 135586612 41 CATGAGCGAGTTGTCATCATCAAGAATATGTTTCATCCTAT CATGAGCGAGTTGTCATCATCAATAATATGTTTCATCCTAT < 41bp 0.869615897241819 0.547311125601406 0.41774523 0.122704774 prediction 0.644609543280825 Functional Loss - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135586592 chrX:135586595 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51827 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:135586580-135586600
64251 chr11 44148449 44148449 1 + G T LUSC 44148446 + 44148426 44148466 41 GTGTTACAAGCTGGCTGTGTCCCGGTTGTCATTGCAGACTC GTGTTACAAGCTGGCTGTGTCCCTGTTGTCATTGCAGACTC < 41bp 0.822266635244737 0.46047383071829 0.1224111 0.050929844 prediction 0.644533270489474 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44148446 chr11:44148449 synonymous SNV . 0 24 hm5C_associated_SNPs_51830 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:44148431-44148468
64251 chr1 28858817 28858817 1 + A C rs74891018 28858813 + 28858793 28858833 41 GTCAGCAGGAGACAGTCACACAGCAGCCCTCACCGATGATG GTCAGCAGGAGACAGTCACACAGCCGCCCTCACCGATGATG < 41bp 0.891073998917884 0.568901314970295 0.41554272 0.58987105 prediction 0.644345367895179 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28858813 chr1:28858817 synonymous SNV . 0 25 hm5C_associated_SNPs_51837 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:28858801-28858839
64251 chr2 61258703 61258703 1 + G T GBM 61258700 + 61258680 61258720 41 TGCTTACAGTTCATTTTCTTCTGGATATGGTGCCTATGGAA TGCTTACAGTTCATTTTCTTCTGTATATGGTGCCTATGGAA < 41bp 0.822083902164172 0.480938426534593 0.22190514 0.1890814 prediction 0.644167804328344 Functional Loss - PEX13 ENSG00000162928 CDS Human protein_coding chr2:61258700 chr2:61258703 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_51846 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:61258688-61258711
64251 chr5 98109838 98109838 1 + A C rs2662263 98109834 + 98109814 98109854 41 GCCGCCGAGGTTGAGCAGCGCCGCAGCCCCGGGCTCTGCCC GCCGCCGAGGTTGAGCAGCGCCGCCGCCCCGGGCTCTGCCC < 41bp 0.872552573855636 0.550491870151809 0.6646217 0.7978416 prediction 0.644121407407653 Functional Loss - RGMB ENSG00000174136 CDS Human protein_coding chr5:98109834 chr5:98109838 nonsynonymous SNV 0.621 1 25 hm5C_associated_SNPs_51848 0 0 2 DDX3X POSTAR2 ENCODE chr5:98109830-98109873
64251 chr10 105762247 105762247 1 + A C UCEC 105762243 + 105762223 105762263 41 GCTTGAAAATCTGCCTGACACAGAAGACCAAGAAACTGTGG GCTTGAAAATCTGCCTGACACAGACGACCAAGAAACTGTGG < 41bp 0.851781721627855 0.529722732332284 0.11588538 0.23170024 prediction 0.644117978591142 Functional Loss - SLK ENSG00000065613 CDS Human protein_coding chr10:105762243 chr10:105762247 nonsynonymous SNV 0.841 0 25 hm5C_associated_SNPs_51849 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:105762223-105762259
64251 chr11 35684861 35684861 1 + A C GBM 35684857 + 35684837 35684877 41 TACGTCCACGGCTCCCAGGCCTGGACCCCGCCAGCTGACGG TACGTCCACGGCTCCCAGGCCTGGCCCCCGCCAGCTGACGG < 41bp 0.872021226189523 0.549963705681993 0.080041975 0.070767194 prediction 0.644115041015061 Functional Loss - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684857 chr11:35684861 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_51850 0 0 1 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr11:35684860-35684880
64251 chr2 162251702 162251702 1 + G T UCEC 162251699 + 162251679 162251719 41 AAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGTAAA AAAGAGATGTTGGAATTAGCCAATAATTACAATAAGGTAAA < 41bp 0.822048591652778 0.497026846376799 0.3134998 0.21044716 prediction 0.644097183305557 Functional Loss - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162251699 chr2:162251702 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_51852 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:162251668-162251715
64251 chr1 215768773 215768773 1 + G T COAD 215768770 + 215768750 215768790 41 GTTGGTGGCCACGAGTCATACAGGGAAAGTGGGAGTGTGGA GTTGGTGGCCACGAGTCATACAGTGAAAGTGGGAGTGTGGA < 41bp 0.862338846246502 0.540359262424475 0.86930466 0.12794659 prediction 0.643959167644053 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215768770 chr1:215768773 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51860 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:215768760-215768780
64251 chr1 151065743 151065743 1 + G T UCEC 151065740 + 151065720 151065760 41 GGGCCACAGAGCGCCACCATCGAGATGTCGTAGAGTTACTT GGGCCACAGAGCGCCACCATCGATATGTCGTAGAGTTACTT < 41bp 0.866704887641302 0.544759689681937 0.9063407 0.12109551 prediction 0.64389039591873 Functional Loss - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151065740 chr1:151065743 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_51863 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:151065728-151065752
64251 chr10 70097735 70097735 1 + A C STAD 70097731 + 70097711 70097751 41 CAGAAAATGCTCTGGGGAAACACAAGGAAAGAATAGGGCAC CAGAAAATGCTCTGGGGAAACACACGGAAAGAATAGGGCAC < 41bp 0.822651825750307 0.50078587906081 0.4691269 0.21000966 prediction 0.643731893378994 Functional Loss - HNRNPH3 ENSG00000096746 CDS Human protein_coding chr10:70097731 chr10:70097735 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_51866 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:70097700-70097817
64251 chr15 89719209 89719209 1 + G T UCEC 89719207 + 89719187 89719227 41 TGTGCTGCGTCAGCGTGTGCCAGGGGTACAGTGCACTGAGG TGTGCTGCGTCAGCGTGTGCCATGGGTACAGTGCACTGAGG < 41bp 0.83519372405506 0.513332199746824 0.9300581 0.33680376 prediction 0.643723048616473 Functional Loss - ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89719207 chr15:89719209 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_51868 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr15:89719190-89719211
64251 chr16 88037961 88037961 1 + G T UCEC 88037958 + 88037938 88037978 41 CGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCCTTGAG CGGCAGAACGCCATTGTAGCCAATATGGAAGACCCCTTGAG < 41bp 0.821842038086812 0.46913379375346 0.9043629 0.3518043 prediction 0.643684076173625 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88037958 chr16:88037961 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51869 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:88037938-88037971
64251 chr4 38690565 38690565 1 + G T LUAD 38690562 + 38690542 38690582 41 TCGCGGCATGGAATACGGAGCCCGGGGATCCTGCCCGTCAT TCGCGGCATGGAATACGGAGCCCTGGGATCCTGCCCGTCAT < 41bp 0.821836597914154 0.466593014177845 0.7923975 0.3262652 prediction 0.643673195828308 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690562 chr4:38690565 synonymous SNV . 0 24 hm5C_associated_SNPs_51870 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr4:38690553-38690593
64251 chr2 135012198 135012198 1 + G T LUSC 135012195 + 135012175 135012215 41 TGTGGTGGATGGGCCATACGCTGGAGTCATGACAGCTTATG TGTGGTGGATGGGCCATACGCTGTAGTCATGACAGCTTATG < 41bp 0.853970444806404 0.532147509216698 0.5209425 0.10946563 prediction 0.643645871179412 Functional Loss - MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135012195 chr2:135012198 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_51872 0 0 3 GRWD1 POSTAR2 ENCODE chr2:135012142-135012217
64251 chr2 128184779 128184779 1 + G T BLCA 128184776 + 128184756 128184796 41 GCCCACTGCATGGATGAGTCCAAGAAGCTCCTTGTCAGGCT GCCCACTGCATGGATGAGTCCAATAAGCTCCTTGTCAGGCT < 41bp 0.821670727757813 0.457324340157071 0.63956034 0.07852024 prediction 0.643341455515627 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128184776 chr2:128184779 nonsynonymous SNV 0.338 1 24 hm5C_associated_SNPs_51884 0 0 2 PPIG POSTAR2 ENCODE chr2:128184763-128184781
64251 chr1 156084943 156084943 1 + G T STAD 156084940 + 156084920 156084960 41 AGCCGCGAGGTGTCCGGCATCAAGGCCGCCTACGAGGCCGA AGCCGCGAGGTGTCCGGCATCAATGCCGCCTACGAGGCCGA < 41bp 0.864069203688537 0.542407041848052 0.912987 0.6362736 prediction 0.64332432368097 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156084940 chr1:156084943 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51887 0 0 5 FMR1 POSTAR2 ENCODE chr1:156084901-156084990
64251 chr7 2418821 2418821 1 + A C LUAD 2418817 + 2418797 2418837 41 TGGAAGATTTCCGGAAGTACCGGAAAATGGCCCAGGAGCTC TGGAAGATTTCCGGAAGTACCGGACAATGGCCCAGGAGCTC < 41bp 0.821637925851896 0.444438728473446 0.8852337 0.81661487 prediction 0.643275851703793 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2418817 chr7:2418821 nonsynonymous SNV 0.978 1 25 hm5C_associated_SNPs_51892 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2418766-2418837
64251 chr6 26388327 26388327 1 + G T UCEC 26388324 + 26388304 26388344 41 GCATATCTGGAGGGTGGTACCCAGAGCCCCTCACAGTGTGG GCATATCTGGAGGGTGGTACCCATAGCCCCTCACAGTGTGG < 41bp 0.821550847451853 0.46236659202918 0.81540316 0.26177287 prediction 0.643101694903705 Functional Loss - BTN2A2 ENSG00000124508 CDS Human protein_coding chr6:26388324 chr6:26388327 stopgain 0.778 0 24 hm5C_associated_SNPs_51902 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:26388325-26388359
64251 chr9 123555837 123555837 1 + G T rs10985040 123555834 + 123555814 123555854 41 GCGTCCCGGGAAGCTGAACGCGTGCCGCGCGGCCCTCACGG GCGTCCCGGGAAGCTGAACGCGTTCCGCGCGGCCCTCACGG < 41bp 0.842967483925091 0.521429234866226 0.8566406 0.7829538 prediction 0.643076498117729 Functional Loss - LOC100288842 ENSG00000214654 ncRNA_exonic Human protein_coding chr9:123555834 chr9:123555837 . . 0 24 hm5C_associated_SNPs_51903 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr9:123555836-123555837
64251 chr2 27276872 27276872 1 + G T CESC 27276869 + 27276849 27276889 41 CCTTCTCCTACAGTGACTGCCAGGAACTGCTAAACCAGCTA CCTTCTCCTACAGTGACTGCCAGTAACTGCTAAACCAGCTA < 41bp 0.82151840319154 0.46705194483482 0.9148786 0.075953335 prediction 0.64303680638308 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276869 chr2:27276872 stopgain 1.000 0 24 hm5C_associated_SNPs_51907 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27276869-27276922
64251 chr3 52236729 52236729 1 + G T LUAD 52236726 + 52236706 52236746 41 TTGAGCTTCAGGAGGATGTGCAGGAAATGAATGCCGTGAGG TTGAGCTTCAGGAGGATGTGCAGTAAATGAATGCCGTGAGG < 41bp 0.821498699432589 0.456010601336642 0.70099497 0.40475255 prediction 0.642997398865178 Functional Loss - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52236726 chr3:52236729 stopgain 1.000 1 24 hm5C_associated_SNPs_51908 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:52236705-52236730
64251 chrX 153780299 153780299 1 + G T UCEC 153780296 + 153780276 153780316 41 CGGCAGCAGATCAGGACGTACTGGGCGAAGAGTCTCCTCTG CGGCAGCAGATCAGGACGTACTGTGCGAAGAGTCTCCTCTG < 41bp 0.874413524441823 0.552916370723782 0.89898074 0.5217688 prediction 0.642994307436082 Functional Loss - IKBKG ENSG00000073009 CDS Human other chrX:153780296 chrX:153780299 nonsynonymous SNV 0.163 3 24 hm5C_associated_SNPs_51909 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:153780281-153780302
64251 chr16 30776790 30776790 1 + G T LUSC 30776788 + 30776768 30776808 41 CTGGGAGCTCCTCAGGCTTCCAGGGGGGCCAGATCACACTC CTGGGAGCTCCTCAGGCTTCCATGGGGGCCAGATCACACTC < 41bp 0.821469677296057 0.498079918727815 0.929813 0.9051091 prediction 0.642939354592114 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30776788 chr16:30776790 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_51911 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:30776764-30776790
64251 chr3 101283843 101283843 1 + G T UCEC 101283840 + 101283820 101283860 41 GTGGAAAACTACCATGAAATCTAGTGTGCAAGAAGAATGTG GTGGAAAACTACCATGAAATCTATTGTGCAAGAAGAATGTG < 41bp 0.821455300736373 0.483220293834486 0.08044955 0.07452986 prediction 0.642910601472746 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101283840 chr3:101283843 nonsynonymous SNV 0.958 1 24 hm5C_associated_SNPs_51912 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:101283794-101283861
64251 chr3 56655620 56655620 1 + G T MESO 56655617 + 56655597 56655637 41 TCCTGCCTTTAGCTGAAAATCAAGAAGAGAGTTTTGGTTCT TCCTGCCTTTAGCTGAAAATCAATAAGAGAGTTTTGGTTCT < 41bp 0.834482916631446 0.513031746699953 0.523738 0.1605171 prediction 0.642902339862985 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56655617 chr3:56655620 stopgain 1.000 0 24 hm5C_associated_SNPs_51913 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:56655576-56655700
64251 chr10 121436479 121436479 1 + G T STAD 121436476 + 121436456 121436496 41 GCCCTGGATTCAGTGGACCCCGAGGGACGAGCCGATGTGCG GCCCTGGATTCAGTGGACCCCGATGGACGAGCCGATGTGCG < 41bp 0.821377924536178 0.464679917094934 0.74551207 0.303006 prediction 0.642755849072357 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436476 chr10:121436479 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_51922 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:121436462-121436510
64251 chr16 29858552 29858552 1 + A C COAD 29858548 + 29858528 29858568 41 TCCAGAGGGTCCAGAAGGTCCGAGAGCTGGAACTGGTCTAT TCCAGAGGGTCCAGAAGGTCCGAGCGCTGGAACTGGTCTAT < 41bp 0.881503006856482 0.5601389903463 0.8495015 0.38783306 prediction 0.642728033020365 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29858548 chr16:29858552 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_51923 0 0 1 PPIG POSTAR2 ENCODE chr16:29858540-29858604
64251 chr17 40997112 40997112 1 + G T LUAD 40997109 + 40997089 40997129 41 GGGATGTGACTGTGGAGCGTCACGGCGGGCCCCTGCCCTAT GGGATGTGACTGTGGAGCGTCACTGCGGGCCCCTGCCCTAT < 41bp 0.877636076869018 0.556330226969293 0.43458873 0.08667797 prediction 0.64261169979945 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997109 chr17:40997112 nonsynonymous SNV 0.088 3 24 hm5C_associated_SNPs_51927 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:40997084-40997120
64251 chrX 114856633 114856633 1 + G T UCS 114856630 + 114856610 114856650 41 GGAAGCTAATATGCCATTACCAGGATATAAAGTGAGAGAAA GGAAGCTAATATGCCATTACCAGTATATAAAGTGAGAGAAA < 41bp 0.821286776355684 0.482270786188249 0.74014646 0.061577767 prediction 0.642573552711367 Functional Loss - PLS3 ENSG00000102024 CDS Human protein_coding chrX:114856630 chrX:114856633 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51929 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:114856560-114856660
64251 chr15 80988137 80988137 1 + A C UCEC 80988133 + 80988113 80988153 41 GCCCGGGACAACCGGCTCGGCTGCATGTTCGTGCGCTGCGC GCCCGGGACAACCGGCTCGGCTGCCTGTTCGTGCGCTGCGC < 41bp 0.882791982471855 0.561516554678239 0.31146982 0.26055902 prediction 0.642550855587232 Functional Loss - ABHD17C ENSG00000136379 CDS Human protein_coding chr15:80988133 chr15:80988137 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_51930 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr15:80988119-80988139
64251 chr12 4714129 4714129 1 + G T LUAD 4714127 + 4714107 4714147 41 ACCGATCCCCAGAAGTGATCCTGGGCCACCCCTACGACGTG ACCGATCCCCAGAAGTGATCCTTGGCCACCCCTACGACGTG < 41bp 0.825379931694635 0.504147453908955 0.8258546 0.061618716 prediction 0.64246495557136 Functional Loss - DYRK4 ENSG00000010219;ENSG00000272921 CDS Human other chr12:4714127 chr12:4714129 synonymous SNV . 0 23 hm5C_associated_SNPs_51933 0 0 1 YBX3 POSTAR2 ENCODE chr12:4714109-4714189
64251 chr7 48146550 48146550 1 + G T LUAD 48146547 + 48146527 48146567 41 CAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCGG CAGAGTTTGAGCAGATTGTCCTGTGGAAGCGGGTCATCCGG < 41bp 0.88107112492688 0.559851419192918 0.7884211 0.41195723 prediction 0.642439411467923 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48146547 chr7:48146550 nonsynonymous SNV 0.929 4 24 hm5C_associated_SNPs_51935 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:48146526-48146550
64251 chr12 107254088 107254088 1 + G T HNSC 107254085 + 107254065 107254105 41 CACTGGCTATGGGAATGCTGCAGGACTGTTGGCGGCCAGGG CACTGGCTATGGGAATGCTGCAGTACTGTTGGCGGCCAGGG < 41bp 0.821125499004323 0.471219312280804 0.40824768 0.14732626 prediction 0.642250998008645 Functional Loss - RIC8B ENSG00000111785 CDS Human protein_coding chr12:107254085 chr12:107254088 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51941 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:107254078-107254090
64251 chr19 10828933 10828933 1 + G T COAD 10828930 + 10828910 10828950 41 GCCGGCGCCATGGGCAACCGCGGGATGGAAGAGCTGATCCC GCCGGCGCCATGGGCAACCGCGGTATGGAAGAGCTGATCCC < 41bp 0.844322391277629 0.523229112035846 0.9014008 0.84124017 prediction 0.642186558483565 Functional Loss - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10828930 chr19:10828933 synonymous SNV . 0 24 hm5C_associated_SNPs_51943 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:10828920-10828940
64251 chr10 7786236 7786236 1 + A C rs147229416 7786232 + 7786212 7786252 41 TGGTCCGACACGGCTCAAGTCACGAATCAGAGGCAAGTATG TGGTCCGACACGGCTCAAGTCACGCATCAGAGGCAAGTATG < 41bp 0.885076196582196 0.563995260915594 0.19408318 0.22498348 prediction 0.642161871333202 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7786232 chr10:7786236 nonsynonymous SNV 0.012 0 25 hm5C_associated_SNPs_51944 0 0 3 SND1 POSTAR2 ENCODE chr10:7786203-7786236
64251 chr19 44661343 44661343 1 + G T LUAD 44661340 + 44661320 44661360 41 GTTCAAGTTTTCAGGCCCATCAGGGAGTCCACACTGGAGAG GTTCAAGTTTTCAGGCCCATCAGTGAGTCCACACTGGAGAG < 41bp 0.873620166261783 0.552613401442734 0.8651518 0.12630689 prediction 0.642013529638098 Functional Loss - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661340 chr19:44661343 stopgain 0.975 0 24 hm5C_associated_SNPs_51947 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44661331-44661369
64251 chr16 28995594 28995594 1 + G T LUAD 28995591 + 28995571 28995611 41 CCCAGCGGGGCCGCTCCACCCGCGTGCCCGTGGCCAGTGTG CCCAGCGGGGCCGCTCCACCCGCTTGCCCGTGGCCAGTGTG < 41bp 0.857458864041317 0.536465901644923 0.6156678 0.07652497 prediction 0.641985924792789 Functional Loss - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28995591 chr16:28995594 nonsynonymous SNV 0.602 3 24 hm5C_associated_SNPs_51948 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:28995561-28995635
64251 chr1 150900250 150900250 1 + A C GBM 150900246 + 150900226 150900266 41 AGCAACAGCTACAGTGGAGTCTGAAGAGATTGCAGAGCTGC AGCAACAGCTACAGTGGAGTCTGACGAGATTGCAGAGCTGC < 41bp 0.820975564468228 0.429940946125654 0.10780266 0.13333124 prediction 0.641951128936456 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150900246 chr1:150900250 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_51950 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150900231-150900254
64251 chr8 145245734 145245734 1 + G T ACC 145245731 + 145245711 145245751 41 CCCTGGAGTACCTAGCCAACCTGGACCGAGCCCCAGACCCC CCCTGGAGTACCTAGCCAACCTGTACCGAGCCCCAGACCCC < 41bp 0.863476335092637 0.542533520973787 0.43520692 0.15261257 prediction 0.6418856282377 Functional Loss - MROH1 ENSG00000179832 CDS Human protein_coding chr8:145245731 chr8:145245734 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_51953 0 0 1 BUD13 POSTAR2 ENCODE chr8:145245693-145245744
64251 chr2 62449841 62449841 1 + G T LUSC 62449838 + 62449818 62449858 41 TTTGCCAGAAGGCAAGCAATCCGGGAATCCTGGGGCCAAGA TTTGCCAGAAGGCAAGCAATCCGTGAATCCTGGGGCCAAGA < 41bp 0.820939251704192 0.461119975044426 0.92381114 0.40230292 prediction 0.641878503408384 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449838 chr2:62449841 synonymous SNV . 0 24 hm5C_associated_SNPs_51954 0 0 5 FMR1 POSTAR2 ENCODE chr2:62449836-62449914
64251 chr16 30999192 30999192 1 + G T LUAD 30999189 + 30999169 30999209 41 TGCTACGATGGATCACCCTACAGGAGCTACGAGGATTTCAA TGCTACGATGGATCACCCTACAGTAGCTACGAGGATTTCAA < 41bp 0.865168459586118 0.544316897030092 0.24246201 0.050364763 prediction 0.641703125112052 Functional Loss - HSD3B7 ENSG00000099377 CDS Human protein_coding chr16:30999189 chr16:30999192 nonsynonymous SNV 0.949 1 24 hm5C_associated_SNPs_51959 0 0 5 FBL POSTAR2 GSE43666,GSM1067864 chr16:30999170-30999208
64251 chr7 102584971 102584971 1 + G T OV 102584968 + 102584948 102584988 41 CATATCCTGAGTCATTTGACCAAGACACAGAAGATGATGAA CATATCCTGAGTCATTTGACCAATACACAGAAGATGATGAA < 41bp 0.820841470312692 0.487451156766989 0.19558981 0.038221 prediction 0.641682940625383 Functional Loss - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584968 chr7:102584971 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_51960 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:102584945-102584983
64251 chr10 103912283 103912283 1 + G T COAD 103912280 + 103912260 103912300 41 CAATAAGTTCGCCAAAGCGACAGGAGCTGTGAGTTCCGGGC CAATAAGTTCGCCAAAGCGACAGTAGCTGTGAGTTCCGGGC < 41bp 0.820836209419811 0.472510474429037 0.8378215 0.46761814 prediction 0.641672418839621 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912280 chr10:103912283 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_51962 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:103912247-103912283
64251 chr12 85695135 85695135 1 + G T LUAD 85695132 + 85695112 85695152 41 TTTCACTGACTCTCTTCTTACTGGGGCAACCAATGGACATG TTTCACTGACTCTCTTCTTACTGTGGCAACCAATGGACATG < 41bp 0.8564808270354 0.535692131094869 0.86445403 0.12667492 prediction 0.641577391881062 Functional Loss - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85695132 chr12:85695135 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_51966 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:85695119-85695146
64251 chr16 20926899 20926899 1 + G T UCEC 20926896 + 20926876 20926916 41 AGATGACAACGGCAACACGACAAGAAGTCCTTGGCCTCTAC AGATGACAACGGCAACACGACAATAAGTCCTTGGCCTCTAC < 41bp 0.820717267786316 0.467924957759776 0.27277678 0.05055961 prediction 0.641434535572633 Functional Loss - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20926896 chr16:20926899 stopgain 1.000 1 24 hm5C_associated_SNPs_51970 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:20926899-20926900
64251 chr11 609148 609148 1 + A C rs7116027 609144 + 609124 609164 41 TGGGGGAAGCACATGTCTCGCCGGAGGTGGCTACGGCCGAC TGGGGGAAGCACATGTCTCGCCGGCGGTGGCTACGGCCGAC < 41bp 0.848684683826291 0.52799550280827 0.9003791 0.8794386 prediction 0.641378362036042 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:609144 chr11:609148 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_51971 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr11:609138-609156
64251 chr1 171753568 171753568 1 + G T LUAD 171753565 + 171753545 171753585 41 CGATGGGGACACGGGGGAGCCACGCTACACCCTCCACGTGG CGATGGGGACACGGGGGAGCCACTCTACACCCTCCACGTGG < 41bp 0.820606961158489 0.455712786967713 0.29982752 0.37714183 prediction 0.641213922316979 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753565 chr1:171753568 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51975 0 0 3 FMR1 POSTAR2 ENCODE chr1:171753525-171753581
64251 chr11 2939285 2939285 1 + G T LUSC 2939282 + 2939262 2939302 41 CTGCTGCGGCTGCCAGACGTCCCGAGGATCTTCCTGGTGAA CTGCTGCGGCTGCCAGACGTCCCTAGGATCTTCCTGGTGAA < 41bp 0.820599276736476 0.462405696165554 0.23111999 0.14307165 prediction 0.641198553472953 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2939282 chr11:2939285 synonymous SNV . 0 24 hm5C_associated_SNPs_51977 0 0 3 GRWD1 POSTAR2 ENCODE chr11:2939262-2939326
64251 chr12 54925595 54925595 1 + G T GBM 54925592 + 54925572 54925612 41 TCAGTTTCAGGGCCATGGCCCAAGAGGGACTTCGGGAGGTG TCAGTTTCAGGGCCATGGCCCAATAGGGACTTCGGGAGGTG < 41bp 0.820585298643591 0.451755690927738 0.43062854 0.15168256 prediction 0.641170597287181 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54925592 chr12:54925595 stopgain 0.999 1 24 hm5C_associated_SNPs_51978 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:54925573-54925597
64251 chr19 18054116 18054116 1 + G T SARC 18054113 + 18054093 18054133 41 GAGGTGCCGCTGGAGGAGAACGTGAACCGCCGCGTGCTGGA GAGGTGCCGCTGGAGGAGAACGTTAACCGCCGCGTGCTGGA < 41bp 0.861079489661075 0.540506813931731 0.7065504 0.4813762 prediction 0.64114535145869 Functional Loss - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18054113 chr19:18054116 synonymous SNV . 0 24 hm5C_associated_SNPs_51979 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:18054116-18054117
64251 chrX 65417580 65417580 1 + G T LUAD 65417577 + 65417557 65417597 41 TTTGAGAAAGTAACATACCGCTGGACAGTCCCCCCTCATGC TTTGAGAAAGTAACATACCGCTGTACAGTCCCCCCTCATGC < 41bp 0.820508267917327 0.454017020115779 0.27231765 0.1206651 prediction 0.641016535834653 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65417577 chrX:65417580 nonsynonymous SNV 0.913 5 24 hm5C_associated_SNPs_51981 0 0 1 BUD13 POSTAR2 ENCODE chrX:65417562-65417599
64251 chr3 49050296 49050296 1 + G T ESCA 49050293 + 49050273 49050313 41 GGGAAGGTGCACAGCTTGAGCTGGGCCCTGCGTGGTTATGA GGGAAGGTGCACAGCTTGAGCTGTGCCCTGCGTGGTTATGA < 41bp 0.820500449619281 0.443332734847473 0.5860619 0.060664654 prediction 0.641000899238562 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050293 chr3:49050296 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_51982 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:49050195-49050429
64251 chr4 177032769 177032769 1 + G T LUSC 177032766 + 177032746 177032786 41 GCAAGTGGGATTGCTGGCTGCTGGATGTCAGCCATGGAACA GCAAGTGGGATTGCTGGCTGCTGTATGTCAGCCATGGAACA < 41bp 0.820434250774559 0.482304134267757 0.5345041 0.42095834 prediction 0.640868501549118 Functional Loss - WDR17 ENSG00000150627 CDS Human protein_coding chr4:177032766 chr4:177032769 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_51989 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:177032755-177032776
64251 chr17 7577142 7577142 1 - C A COAD 7577145 - 7577125 7577165 41 TCCTGAGTAGTGGTAATCTACTGGGACGGAACAGCTTTGAG TCCTGAGTAGTGGTAATCTACTGTGACGGAACAGCTTTGAG < 41bp 0.822440274171148 0.502012283431094 0.15240294 0.054140836 prediction 0.640855981480109 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577145 chr17:7577142 stopgain 0.953 1 24 hm5C_associated_SNPs_51990 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:7577118-7577151
64251 chr15 89198669 89198669 1 + G T LUAD 89198666 + 89198646 89198686 41 AACAGCCTGCTTGGACACAGCTCGGTGGAAGATGCGAGGGC AACAGCCTGCTTGGACACAGCTCTGTGGAAGATGCGAGGGC < 41bp 0.820383276587749 0.456884645191504 0.21360174 0.11574307 prediction 0.640766553175498 Functional Loss - ISG20 ENSG00000172183 CDS Human protein_coding chr15:89198666 chr15:89198669 synonymous SNV . 0 24 hm5C_associated_SNPs_51999 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:89198665-89198689
64251 chr6 44122616 44122616 1 + A C CESC 44122612 + 44122592 44122632 41 GCCTCATAGAGAATGAGATTCACCAGTAAGGGGAGGGAGGG GCCTCATAGAGAATGAGATTCACCCGTAAGGGGAGGGAGGG < 41bp 0.820357792130629 0.436711037540619 0.4929826 0.25776535 prediction 0.640715584261258 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122612 chr6:44122616 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_52001 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704216 chr6:44122600-44122620
64251 chr19 4651902 4651902 1 + G T UCEC 4651899 + 4651879 4651919 41 GCCATGGACACCTTCAGCACCAAGAGCCTGGCTCTGCAGGC GCCATGGACACCTTCAGCACCAATAGCCTGGCTCTGCAGGC < 41bp 0.866395329028248 0.546042426372128 0.19829667 0.040554613 prediction 0.640705805312241 Functional Loss - TNFAIP8L1 ENSG00000185361 CDS Human protein_coding chr19:4651899 chr19:4651902 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_52002 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:4651899-4651935
64251 chr9 139815618 139815618 1 + G T SARC 139815615 + 139815595 139815635 41 TGGAAGATCTCAGACTTCGCCAGGAAGCGCCAGGAAGCTGT TGGAAGATCTCAGACTTCGCCAGTAAGCGCCAGGAAGCTGT < 41bp 0.873042749734729 0.552703692952935 0.87170124 0.26254612 prediction 0.640678113563589 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139815615 chr9:139815618 nonsynonymous SNV 0.909 3 24 hm5C_associated_SNPs_52003 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:139815586-139815624
64251 chr7 37988620 37988620 1 + G T HNSC 37988617 + 37988597 37988637 41 CTCAGGAGCAGATCACCGTCCAGGAGTGGTCGGACAGAAAG CTCAGGAGCAGATCACCGTCCAGTAGTGGTCGGACAGAAAG < 41bp 0.859433180923863 0.539099375874218 0.8573081 0.5043784 prediction 0.640667610099292 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37988617 chr7:37988620 stopgain 0.984 1 24 hm5C_associated_SNPs_52005 0 0 3 RPS3 POSTAR2 ENCODE chr7:37988568-37988634
64251 chr15 42113112 42113112 1 + G T LUAD 42113109 + 42113089 42113129 41 AAGAGGGCGCTGGGTTCAGCCAGGTGTGGAACTGAGCGTTA AAGAGGGCGCTGGGTTCAGCCAGTTGTGGAACTGAGCGTTA < 41bp 0.820324837808975 0.457164973311114 0.8886164 0.44733757 prediction 0.640649675617949 Functional Loss - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42113109 chr15:42113112 nonsynonymous SNV 0.972 2 24 hm5C_associated_SNPs_52006 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:42113083-42113121
64251 chr17 8172066 8172066 1 + G T STAD 8172064 + 8172044 8172084 41 TCTGCTACGCCACAACCTGTCTGGGCGCTACGAGTCTCGCT TCTGCTACGCCACAACCTGTCTTGGCGCTACGAGTCTCGCT < 41bp 0.822583667840649 0.502304049642899 0.46622854 0.30488837 prediction 0.640559236395501 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8172064 chr17:8172066 nonsynonymous SNV 0.234 4 23 hm5C_associated_SNPs_52010 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:8172060-8172080
64251 chr15 58834784 58834784 1 + G T LUAD 58834781 + 58834761 58834801 41 TTCACCTAATTGGGTACAGCCTGGGTGCACACGTGTCAGGA TTCACCTAATTGGGTACAGCCTGTGTGCACACGTGTCAGGA < 41bp 0.820278366627181 0.452109342108018 0.7263435 0.0852429 prediction 0.640556733254362 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58834781 chr15:58834784 nonsynonymous SNV 0.865 5 24 hm5C_associated_SNPs_52011 0 0 2 SND1 POSTAR2 ENCODE chr15:58834772-58834838
64251 chr7 129394914 129394914 1 + G T STAD 129394911 + 129394891 129394931 41 CTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCAGTGCAG CTGTGGTGACCAGCCTCGCCCAGTGCAACGGACCAGTGCAG < 41bp 0.82023626190821 0.460865080115113 0.8847393 0.32915792 prediction 0.640472523816421 Functional Loss - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394911 chr7:129394914 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52014 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr19 7987708 7987708 1 + G T rs56011348 7987705 + 7987685 7987725 41 CGCCCTGCCCCTCGGTTCTGCTCGGCTGGCCCTGGCTCTTT CGCCCTGCCCCTCGGTTCTGCTCTGCTGGCCCTGGCTCTTT < 41bp 0.854570940356867 0.534337831383355 0.24496797 0.135319 prediction 0.640466217947025 Functional Loss - SNAPC2 ENSG00000104976 UTR3 Human protein_coding chr19:7987705 chr19:7987708 . . 0 24 hm5C_associated_SNPs_52015 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:7987699-7987737
64251 chr11 60610082 60610082 1 + A C UCEC 60610078 + 60610058 60610098 41 TACCGCCGGTCCCAGGATCACCAGAGCCTTACCCCGGTCAG TACCGCCGGTCCCAGGATCACCAGCGCCTTACCCCGGTCAG < 41bp 0.857417643034047 0.537207762982083 0.86604184 0.5139955 prediction 0.640419760103926 Functional Loss - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60610078 chr11:60610082 nonsynonymous SNV 0.042 3 25 hm5C_associated_SNPs_52019 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:60610080-60610100
64251 chr15 85523914 85523914 1 + G T rs115640954 85523911 + 85523891 85523931 41 GGGGGAGGAGCCCCAGCCACCAAGAAGTTAAGTGACTGGCC GGGGGAGGAGCCCCAGCCACCAATAAGTTAAGTGACTGGCC < 41bp 0.842579002094651 0.522371451154831 0.87700444 0.6809657 prediction 0.640415101879641 Functional Loss - PDE8A ENSG00000073417 UTR5 Human protein_coding chr15:85523911 chr15:85523914 . . 0 24 hm5C_associated_SNPs_52020 0 0 5 BUD13 POSTAR2 ENCODE chr15:85523864-85523996
64251 chr1 238090292 238090292 1 + G T LUAD 238090289 + 238090269 238090309 41 ATGGGCCAGAAGGACTCCTACGTGGGCGACAAGGCCCAGAG ATGGGCCAGAAGGACTCCTACGTTGGCGACAAGGCCCAGAG < 41bp 0.820068247337101 0.479367034934263 0.8254255 0.13540205 prediction 0.640136494674201 Functional Loss - LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090289 chr1:238090292 . . 0 24 hm5C_associated_SNPs_52031 0 0 2 LIN28A POSTAR2 GSE39873,GSM980593 chr1:238090280-238090300
64251 chr7 156743262 156743262 1 + A C LGG 156743258 + 156743238 156743278 41 GGAAAAGAAGGCGCAGGAAGCAGAAGCGCAGAGCGAGGACG GGAAAAGAAGGCGCAGGAAGCAGACGCGCAGAGCGAGGACG < 41bp 0.863333896933113 0.54328487879033 0.49943653 0.65973026 prediction 0.640098036285567 Functional Loss - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156743258 chr7:156743262 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_52033 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:156743260-156743280
64251 chr13 88328487 88328487 1 + G T LUAD 88328484 + 88328464 88328504 41 ACTTGGACGAGGTATCCAAGCAGGAACTTTGCCCAAGGAGA ACTTGGACGAGGTATCCAAGCAGTAACTTTGCCCAAGGAGA < 41bp 0.868819758110642 0.548771516647504 0.81566226 0.32854354 prediction 0.640096482926277 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328484 chr13:88328487 stopgain 1.000 1 24 hm5C_associated_SNPs_52034 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr13:88328484-88328522
64251 chr3 128987831 128987831 1 + G T LUSC 128987828 + 128987808 128987848 41 AGAAAGTGGCAGCTACCAGGCAGGAGATCTTCCAGGGTGAG AGAAAGTGGCAGCTACCAGGCAGTAGATCTTCCAGGGTGAG < 41bp 0.876258063488379 0.556305008013016 0.41234168 0.1350989 prediction 0.639906110950725 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128987828 chr3:128987831 stopgain 1.000 1 24 hm5C_associated_SNPs_52041 0 0 2 PRPF8 POSTAR2 ENCODE chr3:128987828-128987881
64251 chr6 3127546 3127546 1 + G T LUAD 3127543 + 3127523 3127563 41 AAGCTCTTCACGGTGGTCGCCTGGGATCCTCGAGGCTATGG AAGCTCTTCACGGTGGTCGCCTGTGATCCTCGAGGCTATGG < 41bp 0.819941673823808 0.458553503469237 0.3899346 0.019809932 prediction 0.639883347647615 Functional Loss - BPHL ENSG00000137274 CDS Human protein_coding chr6:3127543 chr6:3127546 nonsynonymous SNV 0.983 4 24 hm5C_associated_SNPs_52042 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:3127523-3127554
64251 chr1 229770932 229770932 1 + G T UCEC 229770929 + 229770909 229770949 41 CCTGCAGCAGCAGGTCAACCCAAGACGTGCCTTTGGGGATG CCTGCAGCAGCAGGTCAACCCAATACGTGCCTTTGGGGATG < 41bp 0.869173357520597 0.549242454583096 0.6057393 0.132474 prediction 0.639861805875001 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770929 chr1:229770932 nonsynonymous SNV 0.116 1 24 hm5C_associated_SNPs_52044 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:229770900-229770940
64251 chr19 33597678 33597678 1 + G T COAD 33597675 + 33597655 33597695 41 CCCATGGTGGCCGCCACCTCCGAGAACTCACACTTACTGCA CCCATGGTGGCCGCCACCTCCGATAACTCACACTTACTGCA < 41bp 0.819928421094465 0.448199071151829 0.43513545 0.058654726 prediction 0.63985684218893 Functional Loss - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33597675 chr19:33597678 nonsynonymous SNV 0.018 1 24 hm5C_associated_SNPs_52045 0 0 2 UCHL5 POSTAR2 ENCODE chr19:33597632-33597688
64251 chr17 26688278 26688278 1 + G T rs76813129 26688275 + 26688255 26688295 41 GCGAGCTGGGAGAACTGTAACTGGTGCTTCATCATCAAGTC GCGAGCTGGGAGAACTGTAACTGTTGCTTCATCATCAAGTC < 41bp 0.85643059595304 0.536534674793921 0.16892219 0.10728374 prediction 0.639791842318237 Functional Loss - TMEM199 ENSG00000258924 ncRNA_intronic Human processed_transcript chr17:26688275 chr17:26688278 . . 0 24 hm5C_associated_SNPs_52048 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:26688230-26688283
64251 chr11 64005048 64005048 1 + A C SKCM 64005044 + 64005024 64005064 41 CACCACCAGCGCCCTGACCCCCGGACCTGCCGCTGCCGCTG CACCACCAGCGCCCTGACCCCCGGCCCTGCCGCTGCCGCTG < 41bp 0.819893989640012 0.45214742715935 0.8580203 0.8778529 prediction 0.639787979280025 Functional Loss - VEGFB ENSG00000173511 CDS Human protein_coding chr11:64005044 chr11:64005048 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_52049 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64004981-64005060
64251 chr19 58290630 58290630 1 + G T BLCA 58290627 + 58290607 58290647 41 ACATCTAGTCTCATTAAACACAGGAGGATTCACACTGGAGA ACATCTAGTCTCATTAAACACAGTAGGATTCACACTGGAGA < 41bp 0.819893102737527 0.465577444657228 0.5239719 0.23220226 prediction 0.639786205475054 Functional Loss - ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58290627 chr19:58290630 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_52050 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr19:58290611-58290632
64251 chr9 129642775 129642775 1 + G T UCEC 129642772 + 129642752 129642792 41 CAGTCCCCGGGAGAGGAGTGCGAGAGGGCATTGGTACCCGT CAGTCCCCGGGAGAGGAGTGCGATAGGGCATTGGTACCCGT < 41bp 0.819889033386532 0.459348285346325 0.8573829 0.21943301 prediction 0.639778066773065 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642772 chr9:129642775 nonsynonymous SNV 0.742 3 24 hm5C_associated_SNPs_52051 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr9:129642764-129642791
64251 chr1 110168957 110168957 1 + G T OV 110168954 + 110168934 110168974 41 CCTGCAGGCTCTACAAGGAACAGGGTGAGGGGCAGGGTGAC CCTGCAGGCTCTACAAGGAACAGTGTGAGGGGCAGGGTGAC < 41bp 0.81982276256806 0.445508155912758 0.8599204 0.3951522 prediction 0.63964552513612 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168954 chr1:110168957 nonsynonymous SNV 0.951 2 24 hm5C_associated_SNPs_52061 0 0 8 BUD13 POSTAR2 ENCODE chr1:110168953-110169016
64251 chr17 79990299 79990299 1 + G T CESC 79990296 + 79990276 79990316 41 ACATGCTTGCTGATCAGCTACACGACCAACGCCTTCCCCGG ACATGCTTGCTGATCAGCTACACTACCAACGCCTTCCCCGG < 41bp 0.870798109304181 0.550997471666678 0.19146207 0.15127212 prediction 0.639601275275006 Functional Loss - RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990296 chr17:79990299 synonymous SNV . 0 24 hm5C_associated_SNPs_52064 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79990260-79990300
64251 chr17 70119859 70119859 1 + G T LUAD 70119856 + 70119836 70119876 41 AGCGACGTCATCTCCAACATCGAGACCTTCGATGTCAACGA AGCGACGTCATCTCCAACATCGATACCTTCGATGTCAACGA < 41bp 0.819788619307364 0.451635994947028 0.3581837 0.100222886 prediction 0.639577238614727 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119856 chr17:70119859 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52068 0 0 2 GRWD1 POSTAR2 ENCODE chr17:70119811-70119927
64251 chr13 114290334 114290334 1 + G T LUAD 114290332 + 114290312 114290352 41 GGTGCAGAGAAACCGGCATGCGGAGCAGCAGGCCAGCCGGC GGTGCAGAGAAACCGGCATGCGTAGCAGCAGGCCAGCCGGC < 41bp 0.83664110965439 0.516884021925608 0.87732834 0.40697747 prediction 0.639514175457565 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290332 chr13:114290334 stopgain 0.826 1 23 hm5C_associated_SNPs_52072 0 0 4 GRWD1 POSTAR2 ENCODE chr13:114290295-114290359
64251 chr11 812565 812565 1 + G T HNSC 812562 + 812542 812582 41 CAAGCTTGCCAGTGTACCTGCTGGTGGGGCTGTAGCCGTCT CAAGCTTGCCAGTGTACCTGCTGTTGGGGCTGTAGCCGTCT < 41bp 0.819734739714579 0.446989917759243 0.33916712 0.22682193 prediction 0.639469479429158 Functional Loss - RPLP2 ENSG00000177600 CDS Human protein_coding chr11:812562 chr11:812565 nonsynonymous SNV 0.897 4 24 hm5C_associated_SNPs_52076 0 0 49 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:812520-812600
64251 chr11 47260393 47260393 1 + G T UCEC 47260390 + 47260370 47260410 41 GAGCCAGGAGGAAGCCAGGACACGGAAGTGAGAGACACTAA GAGCCAGGAGGAAGCCAGGACACTGAAGTGAGAGACACTAA < 41bp 0.819700937401492 0.467180457558118 0.39534828 0.2772029 prediction 0.639401874802984 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47260390 chr11:47260393 nonsynonymous SNV 0.117 0 24 hm5C_associated_SNPs_52078 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47260367-47260394
64251 chr11 118944057 118944057 1 + G T UCEC 118944054 + 118944034 118944074 41 GGGCTCCCTGTACGTGCTGACGCGGGATGGGCGGGTCCACG GGGCTCCCTGTACGTGCTGACGCTGGATGGGCGGGTCCACG < 41bp 0.819658952746613 0.451366077660549 0.8524653 0.36150742 prediction 0.639317905493225 Functional Loss - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118944054 chr11:118944057 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52081 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr11:118944039-118944069
64251 chrX 153062964 153062964 1 + G T LUAD 153062961 + 153062941 153062981 41 GAAAACAATTCCCTGTCACTCGAGGCCAGGATGTGGGGCGT GAAAACAATTCCCTGTCACTCGATGCCAGGATGTGGGGCGT < 41bp 0.819646328901039 0.452202373353852 0.9449369 0.92502904 prediction 0.639292657802077 Functional Loss - SSR4 ENSG00000180879 CDS Human protein_coding chrX:153062961 chrX:153062964 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_52082 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153062915-153062977
64251 chr9 101611466 101611466 1 + A C rs145016561 101611462 + 101611442 101611482 41 GCTAAGCAGTGACCAGAACCCACCAAAAACTAGGCTGCATT GCTAAGCAGTGACCAGAACCCACCCAAAACTAGGCTGCATT < 41bp 0.819599711820012 0.448768702050755 0.28568685 0.097254485 prediction 0.639199423640024 Functional Loss - GALNT12 ENSG00000267026 ncRNA_exonic Human antisense chr9:101611462 chr9:101611466 . . 0 25 hm5C_associated_SNPs_52086 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr9:101611466-101611491
64251 chr5 14601175 14601175 1 + G T rs116219787 14601172 + 14601152 14601192 41 TGATGTTGGCAGTTTCATTTCTGGTGGCTGCCATCTGCTAC TGATGTTGGCAGTTTCATTTCTGTTGGCTGCCATCTGCTAC < 41bp 0.86763853351354 0.548086368097923 0.28408572 0.1974254 prediction 0.639104330831234 Functional Loss - FAM105A ENSG00000145569 CDS Human protein_coding chr5:14601172 chr5:14601175 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_52090 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr5:14601153-14601201
64251 chr22 30069437 30069437 1 + G T UCEC 30069434 + 30069414 30069454 41 GAGCAGAAGGTGCTGGAAGCCGAGGTGCTGGCACTGAAGAT GAGCAGAAGGTGCTGGAAGCCGATGTGCTGGCACTGAAGAT < 41bp 0.819548750857404 0.490815091133638 0.81243825 0.2782038 prediction 0.639097501714807 Functional Loss - NF2 ENSG00000186575 CDS Human protein_coding chr22:30069434 chr22:30069437 nonsynonymous SNV 0.984 2 24 hm5C_associated_SNPs_52091 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:30069419-30069446
64251 chr11 65632076 65632076 1 + A C rs115472389 65632072 + 65632052 65632092 41 AGCACACTGCTGCAGGCTGTCACCAACACTCAGGTGAGCTG AGCACACTGCTGCAGGCTGTCACCCACACTCAGGTGAGCTG < 41bp 0.819533676387769 0.421165526285224 0.078541666 0.060485393 prediction 0.639067352775537 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632072 chr11:65632076 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_52092 0 0 7 BUD13 POSTAR2 ENCODE chr11:65632050-65632079
64251 chr4 187209741 187209741 1 + G T UCEC 187209738 + 187209718 187209758 41 AACGTGGTCGAGTACGTGGACTGGATTCTGGAGAAAACTCA AACGTGGTCGAGTACGTGGACTGTATTCTGGAGAAAACTCA < 41bp 0.853175345332327 0.533644660001245 0.27410746 0.16534415 prediction 0.639061370662164 Functional Loss - F11 ENSG00000088926 CDS Human protein_coding chr4:187209738 chr4:187209741 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_52094 0 0 2 LSM11 POSTAR2 ENCODE chr4:187209606-187209743
64251 chr2 207024769 207024769 1 + G T COAD 207024766 + 207024746 207024786 41 CTCAACGATTACCTGGCGGACAAGAGCTACATCGAGGGGTG CTCAACGATTACCTGGCGGACAATAGCTACATCGAGGGGTG < 41bp 0.846099532868668 0.526621627417273 0.7339791 0.4986426 prediction 0.638955810902791 Functional Loss - EEF1B2 ENSG00000114942 CDS Human protein_coding chr2:207024766 chr2:207024769 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52099 0 0 1 YBX3 POSTAR2 ENCODE chr2:207024760-207024783
64251 chr12 100904588 100904588 1 + G T COAD 100904585 + 100904565 100904605 41 CAGAACAAGTGGCAGGTCCTCTGGGACAGAACCTGGAAGTG CAGAACAAGTGGCAGGTCCTCTGTGACAGAACCTGGAAGTG < 41bp 0.860055878901466 0.540582204020645 0.7014774 0.17663437 prediction 0.638947349761641 Functional Loss - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100904585 chr12:100904588 stopgain 0.956 0 24 hm5C_associated_SNPs_52100 0 0 2 GRWD1 POSTAR2 ENCODE chr12:100904560-100904609
64251 chr16 72042682 72042682 1 + A C rs3213422 72042678 + 72042658 72042698 41 AGGAGCATGGCGTGGAGACACCTGAAAGTGAGTCCCGCGAG AGGAGCATGGCGTGGAGACACCTGCAAGTGAGTCCCGCGAG < 41bp 0.819444268779662 0.461145118067076 0.19021833 0.09813237 prediction 0.638888537559323 Functional Loss - DHODH ENSG00000102967 CDS Human protein_coding chr16:72042678 chr16:72042682 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_52102 2 0 1 PRPF8 POSTAR2 ENCODE chr16:72042668-72042738
64251 chr19 10202910 10202910 1 + G T COAD 10202907 + 10202887 10202927 41 AAGACCTGGACAACCTCATCCTGGAGGACCTGAAGGAGGAG AAGACCTGGACAACCTCATCCTGTAGGACCTGAAGGAGGAG < 41bp 0.854362368958468 0.534921609905251 0.24440035 0.096194685 prediction 0.638881518106432 Functional Loss - C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10202907 chr19:10202910 stopgain 1.000 0 24 hm5C_associated_SNPs_52103 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10202887-10203004
64251 chr2 11750844 11750844 1 + G T HNSC 11750841 + 11750821 11750861 41 CGCCTGCACAGCGCGGTGATCAGGACCTTTGTTCTCGTGCA CGCCTGCACAGCGCGGTGATCAGTACCTTTGTTCTCGTGCA < 41bp 0.819367426532593 0.452149090274486 0.90603006 0.2557996 prediction 0.638734853065187 Functional Loss - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11750841 chr2:11750844 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52110 0 0 3 BUD13 POSTAR2 ENCODE chr2:11750801-11750847
64251 chr20 62641664 62641664 1 + G T SARC 62641662 + 62641642 62641682 41 GCTGTGGAGTGCTGCCCCACCAGCGTGGAGGTGAGTCTGGC GCTGTGGAGTGCTGCCCCACCATCGTGGAGGTGAGTCTGGC < 41bp 0.819343495427427 0.499722052469814 0.6775584 0.38359177 prediction 0.638686990854854 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62641662 chr20:62641664 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_52111 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62641637-62641664
64251 chr12 113812778 113812778 1 + G T UCEC 113812775 + 113812755 113812795 41 CAGCACATGCTGCGTGTCATCAAGAAGTACTGGCTCCAGTT CAGCACATGCTGCGTGTCATCAATAAGTACTGGCTCCAGTT < 41bp 0.870406968152858 0.551083059649851 0.91330516 0.2038239 prediction 0.638647817006015 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113812775 chr12:113812778 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52113 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486178 chr12:113812760-113812780
64251 chr9 130869645 130869645 1 + G T COAD 130869642 + 130869622 130869662 41 AGGGGGCTGGCCCCCAACTTCATGAAGGTCATCCCAGCTGT AGGGGGCTGGCCCCCAACTTCATTAAGGTCATCCCAGCTGT < 41bp 0.819314677032387 0.462182637633089 0.33203602 0.1926868 prediction 0.638629354064774 Functional Loss - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130869642 chr9:130869645 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52115 0 0 2 GRWD1 POSTAR2 ENCODE chr9:130869622-130869721
64251 chr16 844189 844189 1 + G T UCEC 844186 + 844166 844206 41 GCTGCCTCTGCGGGCGAGCACGAGAAGGTGGTCCAGGTACC GCTGCCTCTGCGGGCGAGCACGATAAGGTGGTCCAGGTACC < 41bp 0.876172347935076 0.556880009866357 0.9133844 0.8414577 prediction 0.638584676137438 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:844186 chr16:844189 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_52118 0 0 2 PPIG POSTAR2 ENCODE chr16:844157-844192
64251 chr17 34171840 34171840 1 + G T UCEC 34171837 + 34171817 34171857 41 GAGGAGGTTACGGAGGAGATCGAGGAGGTTATGGAGGAGAT GAGGAGGTTACGGAGGAGATCGATGAGGTTATGGAGGAGAT < 41bp 0.872676965285773 0.553448977312657 0.8965238 0.4723407 prediction 0.638455975946231 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171837 chr17:34171840 stopgain 0.999 0 24 hm5C_associated_SNPs_52125 0 0 39 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr17:34171820-34171840
64251 chr14 29237796 29237796 1 + G T LUAD 29237793 + 29237773 29237813 41 AGCAGCACGTCCATGAGCGCCAGGGCCGCGTCCTCCTCCAC AGCAGCACGTCCATGAGCGCCAGTGCCGCGTCCTCCTCCAC < 41bp 0.87170674838497 0.552535831705509 0.92053473 0.18760926 prediction 0.638341833358922 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237793 chr14:29237796 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_52126 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:29237791-29237820
64251 chr9 2039784 2039784 1 + A C rs145170448 2039780 + 2039760 2039800 41 AACAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAG AACAACAGCAGCAGCAACAGCAGCCGCAGCAGCAGCAGCAG < 41bp 0.819127183849345 0.439803213856723 0.28036243 0.26787588 prediction 0.63825436769869 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2039780 chr9:2039784 nonsynonymous SNV 0.712 0 25 hm5C_associated_SNPs_52131 0 0 2 RBM15 POSTAR2 ENCODE chr9:2039728-2039789
64251 chr8 125487501 125487501 1 + A C CESC 125487497 + 125487477 125487517 41 GATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTT GATTCCAGCCAAAGCCGGTTCTGCCTCGTGCTCCAGATCTT < 41bp 0.819116645678024 0.437185157465539 0.041434467 0.020603657 prediction 0.638233291356047 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125487497 chr8:125487501 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_52135 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:125487488-125487520
64251 chrX 48382311 48382311 1 + G T BLCA 48382308 + 48382288 48382328 41 CGTGACCACATGGCTGTTGTCAGGTCGTGCTGCGGTTGTCC CGTGACCACATGGCTGTTGTCAGTTCGTGCTGCGGTTGTCC < 41bp 0.819028323339581 0.4378324840337 0.92587286 0.7811602 prediction 0.638056646679162 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48382308 chrX:48382311 nonsynonymous SNV 0.022 1 24 hm5C_associated_SNPs_52145 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:48382249-48382311
64251 chr16 81390563 81390563 1 + G T STAD 81390561 + 81390541 81390581 41 TGCTGGCCAACTTCAAACCCCGGGGCTACTCTGAGTGCATC TGCTGGCCAACTTCAAACCCCGTGGCTACTCTGAGTGCATC < 41bp 0.832131743365603 0.513112206890708 0.8481747 0.13564995 prediction 0.638039072949791 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81390561 chr16:81390563 synonymous SNV . 0 23 hm5C_associated_SNPs_52146 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:81390536-81390565
64251 chr17 4684113 4684113 1 + G T LUAD 4684111 + 4684091 4684131 41 GTCCGGGGATTGCAGCCGTTCGGGCAGGGGGCAAGGGCTGC GTCCGGGGATTGCAGCCGTTCGTGCAGGGGGCAAGGGCTGC < 41bp 0.818939256773327 0.492308968838095 0.8034004 0.5661969 prediction 0.637878513546654 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4684111 chr17:4684113 synonymous SNV . 0 23 hm5C_associated_SNPs_52152 0 0 3 RPS3 POSTAR2 ENCODE chr17:4684086-4684161
64251 chr15 41247697 41247697 1 + G T CESC 41247694 + 41247674 41247714 41 AGGAGGTCACCTTCTATCCCCAAGATGCTCCTGACCAACCA AGGAGGTCACCTTCTATCCCCAATATGCTCCTGACCAACCA < 41bp 0.818927405175613 0.459680677519922 0.2782376 0.045441806 prediction 0.637854810351227 Functional Loss - CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247694 chr15:41247697 nonsynonymous SNV 0.696 4 24 hm5C_associated_SNPs_52154 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:41247663-41247701
64251 chr17 17699027 17699027 1 + G T UCEC 17699024 + 17699004 17699044 41 GGGCTCTCCGTGCCACCTCTCAGGGGAGTCCGTCATCCTGC GGGCTCTCCGTGCCACCTCTCAGTGGAGTCCGTCATCCTGC < 41bp 0.818863543693089 0.44739076126616 0.9656592 0.87592673 prediction 0.637727087386177 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17699024 chr17:17699027 nonsynonymous SNV 0.616 4 24 hm5C_associated_SNPs_52158 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:17699015-17699043
64251 chr10 126671833 126671833 1 + G T UCEC 126671830 + 126671810 126671850 41 GTTTATGGAGTAAAATATTACAAGAGTTTCCGGGGAGAAAC GTTTATGGAGTAAAATATTACAATAGTTTCCGGGGAGAAAC < 41bp 0.845344452157048 0.526497584983294 0.36131817 0.13421103 prediction 0.637693734347508 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126671830 chr10:126671833 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52159 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:126671803-126671833
64251 chr1 112002250 112002250 1 + A T SKCM 112002246 + 112002226 112002266 41 AAGCACGTGGTGCAAAGCATCTCCACACAGCAGGTACACAA AAGCACGTGGTGCAAAGCATCTCCTCACAGCAGGTACACAA < 41bp 0.823272425429695 0.504489974725888 0.9185933 0.05730775 prediction 0.637564901407613 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:112002246 chr1:112002250 nonsynonymous SNV 0.506 2 25 hm5C_associated_SNPs_52165 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:112002228-112002255
64251 chr19 13051182 13051182 1 + G T UCEC 13051179 + 13051159 13051199 41 GATTGGGACTTCCTGCCACCCAAGAAGATAAAGGATCCTGA GATTGGGACTTCCTGCCACCCAATAAGATAAAGGATCCTGA < 41bp 0.86358230084006 0.544820049328698 0.52201724 0.2842616 prediction 0.637524503022723 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13051179 chr19:13051182 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52166 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chrX 147013966 147013966 1 + G T UCEC 147013963 + 147013943 147013983 41 GAGTTCAAGGCAGCTTGCCTCGAGATTTCATGAACAGTTTA GAGTTCAAGGCAGCTTGCCTCGATATTTCATGAACAGTTTA < 41bp 0.818753907296306 0.490737619786246 0.83534074 0.10540342 prediction 0.637507814592613 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147013963 chrX:147013966 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_52168 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:147013945-147013971
64251 chr19 5144306 5144306 1 + G T COAD 5144303 + 5144283 5144323 41 CTAGGCCAGGTGGTCATCACCAAGAACCGCAACGGGCTGTA CTAGGCCAGGTGGTCATCACCAATAACCGCAACGGGCTGTA < 41bp 0.873167642658511 0.554437298810646 0.8666668 0.19734594 prediction 0.63746068769573 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5144303 chr19:5144306 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52171 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:5144300-5144320
64251 chr2 233527587 233527587 1 + G T LUSC 233527584 + 233527564 233527604 41 ATGGAGAAGCTGGGGGCCCCCCAGACCCACCTGGGCCTGAA ATGGAGAAGCTGGGGGCCCCCCATACCCACCTGGGCCTGAA < 41bp 0.818727317162264 0.453342505641464 0.293162 0.22319466 prediction 0.637454634324528 Functional Loss - EFHD1 ENSG00000115468 CDS Human protein_coding chr2:233527584 chr2:233527587 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_52172 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:233527564-233527605
64251 chr9 124522316 124522316 1 + G T LUSC 124522313 + 124522293 124522333 41 CTCAAGACGGACAATGTTTTCTGGGGCGAGCACTTCGAGTT CTCAAGACGGACAATGTTTTCTGTGGCGAGCACTTCGAGTT < 41bp 0.872900735032569 0.554216908034092 0.7460746 0.24566534 prediction 0.637367653996956 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124522313 chr9:124522316 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_52179 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr9:124522315-124522316
64251 chr7 99971779 99971779 1 + G T COAD 99971776 + 99971756 99971796 41 CCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCACAGCTCC CCCTTCTCCTTCTATTACCCCTGTGAGTTAGCCACAGCTCC < 41bp 0.818656240221799 0.440641858109675 0.16782281 0.12594706 prediction 0.637312480443598 Functional Loss - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971776 chr7:99971779 nonsynonymous SNV 0.002 3 24 hm5C_associated_SNPs_52181 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:99971775-99971805
64251 chr18 8798142 8798142 1 + G T UCEC 8798140 + 8798120 8798160 41 GGCTCGGGGAGCTTGGAGTCCAGGGGGGTCACCAGGCGGAT GGCTCGGGGAGCTTGGAGTCCATGGGGGTCACCAGGCGGAT < 41bp 0.838119079117477 0.519466761524864 0.9275248 0.908465 prediction 0.637304635185226 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8798140 chr18:8798142 nonsynonymous SNV 0.610 2 23 hm5C_associated_SNPs_52182 0 0 2 BUD13 POSTAR2 ENCODE chr18:8798085-8798161
64251 chr11 66288771 66288771 1 + G T STAD 66288768 + 66288748 66288788 41 TTCCCAGCGTCCCCGTCTTCCTAGAGGTTTCTGGCCAGTTT TTCCCAGCGTCCCCGTCTTCCTATAGGTTTCTGGCCAGTTT < 41bp 0.818636215339292 0.458840206225727 0.5648333 0.38930348 prediction 0.637272430678585 Functional Loss - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66288768 chr11:66288771 stopgain 0.990 0 24 hm5C_associated_SNPs_52185 0 0 1 PPIG POSTAR2 ENCODE chr11:66288766-66288833
64251 chr11 111899321 111899321 1 + G T UCEC 111899319 + 111899299 111899339 41 ATACTTGTTGCTGAAGGTACCAGGGATGTTCCCATCGGAGC ATACTTGTTGCTGAAGGTACCATGGATGTTCCCATCGGAGC < 41bp 0.818632750940498 0.494845482241873 0.9118326 0.032451183 prediction 0.637265501880997 Functional Loss - DLAT ENSG00000150768 CDS Human protein_coding chr11:111899319 chr11:111899321 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52186 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:111899298-111899321
64251 chr3 127379518 127379518 1 + G T LAML 127379515 + 127379495 127379535 41 CACCAGCAGCAGCCAGACCCCAGGGGCCACCAAAAGCAGGC CACCAGCAGCAGCCAGACCCCAGTGGCCACCAAAAGCAGGC < 41bp 0.874172685373586 0.555585934784199 0.81419796 0.21765214 prediction 0.637173501178774 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379515 chr3:127379518 nonsynonymous SNV 0.012 1 24 hm5C_associated_SNPs_52193 0 0 4 AGGF1 POSTAR2 ENCODE chr3:127379371-127379542
64251 chrX 152774745 152774745 1 + A C rs2980054 152774741 + 152774721 152774761 41 TGCCCACAAAACCCCAGGGACAGCAGTCTCCCCAGCCTGCC TGCCCACAAAACCCCAGGGACAGCCGTCTCCCCAGCCTGCC < 41bp 0.829773318850575 0.511190043930005 0.07152727 0.1488052 prediction 0.63716654984114 Functional Loss - BGN ENSG00000182492 UTR3 Human protein_coding chrX:152774741 chrX:152774745 . . 0 25 hm5C_associated_SNPs_52195 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039849 chrX:152774741-152774762
64251 chr9 131847036 131847036 1 + G T LUAD 131847033 + 131847013 131847053 41 TGACCCTCATCATATTTAAGCGGGAGCTGCACACGGTGAGT TGACCCTCATCATATTTAAGCGGTAGCTGCACACGGTGAGT < 41bp 0.880738179651949 0.562180983619161 0.91197014 0.3878258 prediction 0.637114392065576 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847033 chr9:131847036 stopgain 1.000 1 24 hm5C_associated_SNPs_52199 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:131847014-131847041
64251 chr10 17702479 17702479 1 + G T UCEC 17702476 + 17702456 17702496 41 TCTACAGAGAAAGCAACCAGCGAGATGAATACTGCTGAGGA TCTACAGAGAAAGCAACCAGCGATATGAATACTGCTGAGGA < 41bp 0.848167476335508 0.52964277758396 0.78557175 0.23929787 prediction 0.637049397503096 Functional Loss - STAM ENSG00000136738 CDS Human protein_coding chr10:17702476 chr10:17702479 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52203 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:17702469-17702497
64251 chr6 27806523 27806523 1 + G T BLCA 27806520 + 27806500 27806540 41 AAGGCCCAGAAGAAGGACGGCAAGAAGCGCAAGCGCAGCCG AAGGCCCAGAAGAAGGACGGCAATAAGCGCAAGCGCAGCCG < 41bp 0.850025963707035 0.531502919090488 0.21202224 0.19709876 prediction 0.637046089233095 Functional Loss - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806520 chr6:27806523 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52204 0 0 4 GRWD1 POSTAR2 ENCODE chr6:27806406-27806541
64251 chr3 50257397 50257397 1 + G T UCEC 50257394 + 50257374 50257414 41 GCCCACGGAGAAGGAGCCTGCAAGATCCACCCCCAAAATCC GCCCACGGAGAAGGAGCCTGCAATATCCACCCCCAAAATCC < 41bp 0.81852149400022 0.478978673916088 0.31156498 0.04854536 prediction 0.63704298800044 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50257394 chr3:50257397 . 0.697 0 24 hm5C_associated_SNPs_52206 0 0 3 PCBP2 POSTAR2 ENCODE chr3:50257314-50257397
64251 chrX 154448504 154448504 1 + A C rs148981599 154448500 + 154448480 154448520 41 GAAACAGCCTGGGAATGAGACTGCAGATACAGTATTAAAGA GAAACAGCCTGGGAATGAGACTGCCGATACAGTATTAAAGA < 41bp 0.818491862163976 0.429195755180324 0.047929823 0.056552082 prediction 0.636983724327952 Functional Loss - VBP1 ENSG00000155959 CDS Human protein_coding chrX:154448500 chrX:154448504 synonymous SNV . 0 25 hm5C_associated_SNPs_52209 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:154448460-154448520
64251 chr3 40574037 40574037 1 + G T LUAD 40574034 + 40574014 40574054 41 GCAGCATCAGAGATTACACACGGGAGAGAAACTCTATAAAT GCAGCATCAGAGATTACACACGGTAGAGAAACTCTATAAAT < 41bp 0.85359390554276 0.535144586864883 0.8340129 0.24701113 prediction 0.636898637355755 Functional Loss - ZNF621 ENSG00000172888 CDS Human protein_coding chr3:40574034 chr3:40574037 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_52212 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:40574025-40574055
64251 chr19 33077817 33077817 1 + A C STAD 33077813 + 33077793 33077833 41 TAAAAAAGTAAGCCAACAAACAGAAAAGACAACAACAGTGA TAAAAAAGTAAGCCAACAAACAGACAAGACAACAACAGTGA < 41bp 0.818441462658726 0.452287885196444 0.8124938 0.6388075 prediction 0.636882925317451 Functional Loss - PDCD5 ENSG00000105185 CDS Human protein_coding chr19:33077813 chr19:33077817 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_52213 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:33077785-33077817
64251 chr12 56385939 56385939 1 + G T LUAD 56385936 + 56385916 56385956 41 GGAGGTGCAGCAGGCCGAAGCCGGGGTGTGGATCTCCATGA GGAGGTGCAGCAGGCCGAAGCCGTGGTGTGGATCTCCATGA < 41bp 0.87477231401997 0.556340855711656 0.93656087 0.89600813 prediction 0.636862916616626 Functional Loss - RAB5B ENSG00000111540 CDS Human protein_coding chr12:56385936 chr12:56385939 synonymous SNV . 0 24 hm5C_associated_SNPs_52215 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:56385910-56385969
64251 chr20 44437813 44437813 1 + G T UCEC 44437811 + 44437791 44437831 41 GCAGCATCACATGCGGGCAACAGGGGGCAAGATGGTAAGCA GCAGCATCACATGCGGGCAACATGGGGCAAGATGGTAAGCA < 41bp 0.818431017509658 0.495570521532265 0.92215204 0.41303068 prediction 0.636862035019315 Functional Loss - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44437811 chr20:44437813 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_52216 0 0 2 EFTUD2 POSTAR2 ENCODE chr20:44437745-44437858
64251 chr1 41481738 41481738 1 + G T rs200327092 41481735 + 41481715 41481755 41 AACAGGAAATCCCTGGGTCTCAGGTGGAGAGTGCCGTGCCG AACAGGAAATCCCTGGGTCTCAGTTGGAGAGTGCCGTGCCG < 41bp 0.850966636041318 0.532538862538795 0.93489623 0.44712 prediction 0.636855547005046 Functional Loss - SLFNL1-AS1 ENSG00000171790 UTR3 Human protein_coding chr1:41481735 chr1:41481738 . . 0 24 hm5C_associated_SNPs_52217 0 0 1 SF3B1 POSTAR2 ENCODE chr1:41481736-41481778
64251 chr11 82876804 82876804 1 + G T UCEC 82876801 + 82876781 82876821 41 CAGGACCATCCTTACAAATTCAGGATTTAAAAGGAACTAAC CAGGACCATCCTTACAAATTCAGTATTTAAAAGGAACTAAC < 41bp 0.818424751362128 0.470747161250008 0.7351924 0.28956348 prediction 0.636849502724256 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82876801 chr11:82876804 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_52218 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr11:82876775-82876813
64251 chr7 158716359 158716359 1 + G T UCEC 158716356 + 158716336 158716376 41 CTGGGATTTGAGAGAAGACTCAAGGCTGCATTACTCTGTGA CTGGGATTTGAGAGAAGACTCAATGCTGCATTACTCTGTGA < 41bp 0.818369480909211 0.439065246025061 0.90323263 0.87982166 prediction 0.636738961818422 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158716356 chr7:158716359 nonsynonymous SNV 0.346 3 24 hm5C_associated_SNPs_52224 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:158716340-158716360
64251 chr1 48708225 48708225 1 + G T LUSC 48708223 + 48708203 48708243 41 GGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAG GGAGATATCCGAGAGGCCAGCCTGGGAGTGCCCTGCAGGAG < 41bp 0.818344948641785 0.487858181013244 0.9204235 0.66846144 prediction 0.63668989728357 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48708223 chr1:48708225 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_52226 0 0 3 BUD13 POSTAR2 ENCODE chr1:48708222-48708290
64251 chr2 200820884 200820884 1 + G T BRCA 200820881 + 200820861 200820901 41 GGATTCTCCAACCCCATCAACTGGGTTAGGACTCGAATTAA GGATTCTCCAACCCCATCAACTGTGTTAGGACTCGAATTAA < 41bp 0.8758173905563 0.557473768098853 0.9020176 0.39862606 prediction 0.636687244914894 Functional Loss - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820881 chr2:200820884 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52227 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:200820862-200820889
64251 chrX 1531692 1531692 1 + G T CESC 1531689 + 1531669 1531709 41 TTGTCGTCTGGCCAGTCATGCAGGATCCGGCACAGGACGTA TTGTCGTCTGGCCAGTCATGCAGTATCCGGCACAGGACGTA < 41bp 0.818314010010007 0.452377608082221 0.86939156 0.36072373 prediction 0.636628020020014 Functional Loss - ASMTL ENSG00000169093 CDS Human protein_coding chrX:1531689 chrX:1531692 synonymous SNV . 0 24 hm5C_associated_SNPs_52229 0 0 2 GRWD1 POSTAR2 ENCODE chrX:1531692-1531705
64251 chr12 133277865 133277865 1 + G T UCEC 133277862 + 133277842 133277882 41 GACGCCTCAGCCTTCGCCGCCAAGATGAGGGGGGGCTTCTG GACGCCTCAGCCTTCGCCGCCAATATGAGGGGGGGCTTCTG < 41bp 0.818310612808775 0.445561228254385 0.9357406 0.9102 prediction 0.636621225617551 Functional Loss - PXMP2 ENSG00000176894;ENSG00000256632 CDS Human other chr12:133277862 chr12:133277865 nonsynonymous SNV 0.004 3 24 hm5C_associated_SNPs_52230 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr12:133277865-133277866
64251 chr16 2282245 2282245 1 + G T LUSC 2282243 + 2282223 2282263 41 ACGGTGAGATGGCCGAGGCCCCGGGCAGCCCCCGCCAGCAG ACGGTGAGATGGCCGAGGCCCCTGGCAGCCCCCGCCAGCAG < 41bp 0.818260757689426 0.495169875140861 0.8914573 0.3843457 prediction 0.636521515378851 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2282243 chr16:2282245 synonymous SNV . 0 23 hm5C_associated_SNPs_52233 0 0 6 BUD13 POSTAR2 ENCODE chr16:2282193-2282261
64251 chr3 195410661 195410661 1 + G T PAAD 195410659 + 195410639 195410679 41 ATGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCC ATGATCACTCCAAGCCCATCCATGGGCAACAGAAGAAGCCC < 41bp 0.818258213374496 0.499049370021463 0.8807372 0.19102418 prediction 0.636516426748993 Functional Loss - SDHAP2 ENSG00000215837;ENSG00000242086 ncRNA_exonic Human other chr3:195410659 chr3:195410661 . . 0 23 hm5C_associated_SNPs_52235 0 0 11 BUD13 POSTAR2 ENCODE chr3:195410590-195410759
64251 chr7 128434596 128434596 1 + G T COAD 128434594 + 128434574 128434614 41 TCAGGTGCTGCAGCTGGTGGCAGAACTGGAGGAGACCCGGG TCAGGTGCTGCAGCTGGTGGCATAACTGGAGGAGACCCGGG < 41bp 0.818269455176705 0.500078194240847 0.88649154 0.6412473 prediction 0.636382521871715 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128434594 chr7:128434596 stopgain 0.999 1 23 hm5C_associated_SNPs_52239 0 0 10 AARS POSTAR2 ENCODE chr7:128434565-128434651
64251 chr14 95033402 95033402 1 + G T LUSC 95033399 + 95033379 95033419 41 TCCGGGTGCCCATGATGCTGCAGGACCAGGAGCATCACTGG TCCGGGTGCCCATGATGCTGCAGTACCAGGAGCATCACTGG < 41bp 0.818165993467566 0.446505564440151 0.28823408 0.118676186 prediction 0.636331986935132 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95033399 chr14:95033402 nonsynonymous SNV 0.014 1 24 hm5C_associated_SNPs_52240 0 0 2 SND1 POSTAR2 ENCODE chr14:95033382-95033417
64251 chr4 71654646 71654646 1 + G T STAD 71654643 + 71654623 71654663 41 TGGTATCTCTTCGGCAGCAGCTGGATGACCTCAGAGCTCTC TGGTATCTCTTCGGCAGCAGCTGTATGACCTCAGAGCTCTC < 41bp 0.863351986378368 0.545245588979426 0.5398199 0.3621062 prediction 0.636212794797884 Functional Loss - RUFY3 ENSG00000018189 CDS Human protein_coding chr4:71654643 chr4:71654646 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_52245 0 0 8 BUD13 POSTAR2 ENCODE chr4:71654595-71654677
64251 chr7 99047957 99047957 1 + G T KIRC 99047954 + 99047934 99047974 41 ATCGACCCCGAGTCCAAGATCAAGGACTGTCCTTGGTATGA ATCGACCCCGAGTCCAAGATCAATGACTGTCCTTGGTATGA < 41bp 0.818080314828433 0.436090953502237 0.8840579 0.1545547 prediction 0.636160629656867 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99047954 chr7:99047957 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52248 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99047933-99047964
64251 chrX 13727293 13727293 1 + G T THYM 13727291 + 13727271 13727311 41 GAAGAAGCCCAAGCTTGGTGCAGGGACAACGGCGACTATCC GAAGAAGCCCAAGCTTGGTGCATGGACAACGGCGACTATCC < 41bp 0.819325133795474 0.501257888309824 0.8958787 0.10446313 prediction 0.636134490971301 Functional Loss - RAB9A ENSG00000123595 CDS Human protein_coding chrX:13727291 chrX:13727293 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_52250 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:13727281-13727308
64251 chrX 11793118 11793118 1 + G T LUAD 11793115 + 11793095 11793135 41 CCAGGTTTTTAGCAGAATACCACGATGACTTCTTCCCAGAG CCAGGTTTTTAGCAGAATACCACTATGACTTCTTCCCAGAG < 41bp 0.818006637764936 0.468203303887454 0.3361308 0.2732193 prediction 0.636013275529873 Functional Loss - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11793115 chrX:11793118 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_52255 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:11793118-11793141
64251 chr7 108213597 108213597 1 + G T UCEC 108213594 + 108213574 108213614 41 GTAGACAAAGGCATCATTTCCAAGAATTTTCTTTTGGAGGT GTAGACAAAGGCATCATTTCCAATAATTTTCTTTTGGAGGT < 41bp 0.831842059374347 0.513878257861924 0.45439452 0.22055405 prediction 0.635927603024846 Functional Loss - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108213594 chr7:108213597 stopgain 0.998 0 24 hm5C_associated_SNPs_52256 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:108213561-108213597
64251 chr1 156737938 156737938 1 + A C STAD 156737934 + 156737914 156737954 41 CCCTGGCCTCAATCTGCCCCCTCCAATTGGCGGTGCCGGTC CCCTGGCCTCAATCTGCCCCCTCCCATTGGCGGTGCCGGTC < 41bp 0.817948260428663 0.418078700227086 0.9527117 0.018100798 prediction 0.635896520857326 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156737934 chr1:156737938 synonymous SNV . 0 25 hm5C_associated_SNPs_52257 0 0 6 CPSF2 POSTAR2 GSE37401,GSM917670 chr1:156737919-156737942
64251 chr19 17892074 17892074 1 + G T UCEC 17892071 + 17892051 17892091 41 GCACCTGCTGACCCCACAGCCAGGGAGGGCCTGGCAGCCCC GCACCTGCTGACCCCACAGCCAGTGAGGGCCTGGCAGCCCC < 41bp 0.886456338891758 0.568523842502676 0.92941105 0.86502934 prediction 0.635864992778164 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17892071 chr19:17892074 nonsynonymous SNV 0.162 0 24 hm5C_associated_SNPs_52258 0 0 1 DDX24 POSTAR2 ENCODE chr19:17892041-17892092
64251 chr8 125499514 125499514 1 + G T UCS 125499511 + 125499491 125499531 41 AAATAAAAGGGAGCCGCTTACAAGAAATAAATGATGTATGT AAATAAAAGGGAGCCGCTTACAATAAATAAATGATGTATGT < 41bp 0.834590089889403 0.516658844389479 0.8801303 0.13679612 prediction 0.63586249099985 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499511 chr8:125499514 stopgain 0.980 1 24 hm5C_associated_SNPs_52259 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr8:125499511-125499549
64251 chr1 155110166 155110166 1 + A C rs541358920 155110162 + 155110142 155110182 41 GGCCTCTTCTGCAGTGTCTTCACCATCAGCATGTACCTCTC GGCCTCTTCTGCAGTGTCTTCACCCTCAGCATGTACCTCTC < 41bp 0.896159995050664 0.578271125767348 0.11194849 0.13513279 prediction 0.63577773856663 Functional Loss - SLC50A1 ENSG00000169241 CDS Human protein_coding chr1:155110162 chr1:155110166 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_52262 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:155110135-155110193
64251 chr19 12739849 12739849 1 + G T LGG 12739846 + 12739826 12739866 41 CCTTATGAATGTAAGGAATGCGGGAAGGCCTTTATTTATCC CCTTATGAATGTAAGGAATGCGGTAAGGCCTTTATTTATCC < 41bp 0.817832357243697 0.46894079777434 0.384817 0.11289126 prediction 0.635664714487395 Functional Loss - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12739846 chr19:12739849 synonymous SNV . 0 24 hm5C_associated_SNPs_52264 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12739840-12739860
64251 chr19 57840085 57840085 1 + G T LUAD 57840083 + 57840063 57840103 41 GCAGCATCAACGGATTCACACTGGGGAGAAGCCTTATGAAT GCAGCATCAACGGATTCACACTTGGGAGAAGCCTTATGAAT < 41bp 0.817816968015845 0.493095747746007 0.089652866 0.020779878 prediction 0.63563393603169 Functional Loss - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57840083 chr19:57840085 nonsynonymous SNV 0.213 3 23 hm5C_associated_SNPs_52265 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57840061-57840097
64251 chr2 176988812 176988812 1 + A C rs146173388 176988808 + 176988788 176988828 41 GCTACGAGGTGGCCAGGATTCTCAACCTAACAGAGAGACAG GCTACGAGGTGGCCAGGATTCTCACCCTAACAGAGAGACAG < 41bp 0.817797986359326 0.431212692891149 0.3734371 0.18615016 prediction 0.635595972718652 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988808 chr2:176988812 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_52268 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176988774-176988823
64251 chr18 77107832 77107832 1 + G T LUSC 77107829 + 77107809 77107849 41 ACGCAGTTCCGGCACATAGGCAGGCTGCTCATGGTGCACGG ACGCAGTTCCGGCACATAGGCAGTCTGCTCATGGTGCACGG < 41bp 0.817795769267861 0.46501083397765 0.8973993 0.25649905 prediction 0.635591538535722 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77107829 chr18:77107832 nonsynonymous SNV 0.633 4 24 hm5C_associated_SNPs_52269 0 0 1 DDX24 POSTAR2 ENCODE chr18:77107767-77107846
64251 chrX 117960152 117960152 1 + G T LUAD 117960149 + 117960129 117960169 41 ATTGATTCCCCCCACAATTCCAGGGCTCAGTTTCCTTCCAC ATTGATTCCCCCCACAATTCCAGTGCTCAGTTTCCTTCCAC < 41bp 0.887015571204485 0.569279953295298 0.9278514 0.47217283 prediction 0.635471235818375 Functional Loss - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117960149 chrX:117960152 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_52276 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:117960132-117960158
64251 chr17 73663550 73663550 1 + G T SARC 73663548 + 73663528 73663568 41 GCTGGAATCGAGGCGGTGGGCAGCGCGGCTGGTAAGGCCCA GCTGGAATCGAGGCGGTGGGCATCGCGGCTGGTAAGGCCCA < 41bp 0.831047084590564 0.513333823514689 0.66472834 0.6193209 prediction 0.635426522151748 Functional Loss - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73663548 chr17:73663550 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_52278 0 0 13 GRWD1 POSTAR2 ENCODE chr17:73663445-73663558
64251 chr3 5025075 5025075 1 + G T LUAD 5025072 + 5025052 5025092 41 ACCTGATCAGCTCCCCGTTCCTGGGCCCACACCCACACCAG ACCTGATCAGCTCCCCGTTCCTGTGCCCACACCCACACCAG < 41bp 0.817699614595913 0.433598093447847 0.8088367 0.15256551 prediction 0.635399229191827 Functional Loss - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025072 chr3:5025075 nonsynonymous SNV 0.789 3 24 hm5C_associated_SNPs_52280 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:5025061-5025145
64251 chrX 117530973 117530973 1 + G T LUAD 117530970 + 117530950 117530990 41 AATGATTAAGAACCTGGATACTGGAGAAGAAATACCTTTGA AATGATTAAGAACCTGGATACTGTAGAAGAAATACCTTTGA < 41bp 0.817696606729195 0.475131584624715 0.106562704 0.025037438 prediction 0.635393213458391 Functional Loss - WDR44 ENSG00000131725 CDS Human protein_coding chrX:117530970 chrX:117530973 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_52281 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:117530956-117530982
64251 chr21 38877665 38877665 1 + G T SARC 38877662 + 38877642 38877682 41 AGGACCTGGTGGGCGACGTGCTGGGGAGTCAGGTCATACGG AGGACCTGGTGGGCGACGTGCTGTGGAGTCAGGTCATACGG < 41bp 0.817693833392295 0.477972981098228 0.72879434 0.40826076 prediction 0.63538766678459 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38877662 chr21:38877665 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52282 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:38877625-38877676
64251 chrX 49103250 49103250 1 + A C COAD 49103246 + 49103226 49103266 41 AGCAACTGACTGAGCATCTGCGCCAAAGCTGGGGCCTGCTT AGCAACTGACTGAGCATCTGCGCCCAAGCTGGGGCCTGCTT < 41bp 0.817654911842996 0.40624345585805 0.3312266 0.24852374 prediction 0.635309823685992 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49103246 chrX:49103250 nonsynonymous SNV 0.718 3 25 hm5C_associated_SNPs_52288 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:49103228-49103267
64251 chr15 91187034 91187034 1 + A C rs182337585 91187030 + 91187010 91187050 41 GAAGGAGAGACGGAAGATGCCAGGACCTTTGCTTGGACAGC GAAGGAGAGACGGAAGATGCCAGGCCCTTTGCTTGGACAGC < 41bp 0.817634164447613 0.486832563558926 0.8928968 0.85753846 prediction 0.635268328895225 Functional Loss - CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91187030 chr15:91187034 . . 0 25 hm5C_associated_SNPs_52290 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:91187016-91187042
64251 chr13 103492015 103492015 1 + G T UCEC 103492012 + 103491992 103492032 41 TTCCATTTGGAACCATTAGACAAGAATCACAACCTCCAACA TTCCATTTGGAACCATTAGACAATAATCACAACCTCCAACA < 41bp 0.848855224829073 0.531232342650193 0.16330937 0.06577501 prediction 0.635245764357762 Functional Loss - BIVM;BIVM-ERCC5 ENSG00000134897;ENSG00000270181 CDS Human other chr13:103492012 chr13:103492015 stopgain 1.000 0 24 hm5C_associated_SNPs_52291 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:103492015-103492040
64251 chr1 150900290 150900290 1 + G T UCEC 150900287 + 150900267 150900307 41 AACAGGCAGTGGTTGAGGAACTGGGTATCTCTATGGAGGAA AACAGGCAGTGGTTGAGGAACTGTGTATCTCTATGGAGGAA < 41bp 0.817612468183716 0.454463795780599 0.3378074 0.044763684 prediction 0.635224936367432 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150900287 chr1:150900290 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_52292 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:150900234-150900308
64251 chr17 8167564 8167564 1 + G T CESC 8167562 + 8167542 8167582 41 GACGATCGGGAGTGTCCTGTCAGAAGAAATGGCCAGGGGGA GACGATCGGGAGTGTCCTGTCATAAGAAATGGCCAGGGGGA < 41bp 0.832106188503338 0.514515817232209 0.92328703 0.48888674 prediction 0.635180742542257 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167562 chr17:8167564 nonsynonymous SNV 0.022 0 23 hm5C_associated_SNPs_52293 0 0 4 BUD13 POSTAR2 ENCODE chr17:8167552-8167608
64251 chr6 158349731 158349731 1 + G T LUSC 158349729 + 158349709 158349749 41 GGAGCACTGGAAGCGCTGCACGGGCCGTAAGTCCACTCCTC GGAGCACTGGAAGCGCTGCACGTGCCGTAAGTCCACTCCTC < 41bp 0.826857183624426 0.509312335427565 0.8340769 0.35299617 prediction 0.635089696393722 Functional Loss - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158349729 chr6:158349731 nonsynonymous SNV 0.294 4 23 hm5C_associated_SNPs_52296 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:158349706-158349731
64251 chr22 31365894 31365894 1 + A C rs113344826 31365890 + 31365870 31365910 41 GGTTTTCTTCCGGGCCTAGCCACCAGTTGGCGGAGTGACCT GGTTTTCTTCCGGGCCTAGCCACCCGTTGGCGGAGTGACCT < 41bp 0.817485377523648 0.478351905517049 0.118050545 0.09581047 prediction 0.634970755047296 Functional Loss - TUG1 ENSG00000253352 upstream Human antisense chr22:31365890 chr22:31365894 . . 0 25 hm5C_associated_SNPs_52302 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:31365827-31365964
64251 chr15 44092917 44092917 1 + G T SARC 44092915 + 44092895 44092935 41 ACGGAAACATGACAGCGGTGCGGCGGACTTGGAGCGGGTCA ACGGAAACATGACAGCGGTGCGTCGGACTTGGAGCGGGTCA < 41bp 0.817483853081645 0.496600856665194 0.8901902 0.26239392 prediction 0.634967706163289 Functional Loss - HYPK ENSG00000140264;ENSG00000242028 CDS Human other chr15:44092915 chr15:44092917 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_52303 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:44092900-44092920
64251 chr19 13056794 13056794 1 + A C LIHC 13056790 + 13056770 13056810 41 TCACCATCACGCTCAAAACGCTGCAGCAGCAGACCTTCAAG TCACCATCACGCTCAAAACGCTGCCGCAGCAGACCTTCAAG < 41bp 0.872232464427481 0.554754922413691 0.20372626 0.19754356 prediction 0.634955084027581 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13056790 chr19:13056794 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_52304 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13056680-13056800
64251 chr10 104486811 104486811 1 + G T SARC 104486809 + 104486789 104486829 41 TGCCAAGAAGCTGTATGACTCGGCCTTCCACCCCGACACTG TGCCAAGAAGCTGTATGACTCGTCCTTCCACCCCGACACTG < 41bp 0.822875601279531 0.505487075682218 0.8915373 0.0385862 prediction 0.634777051194627 Functional Loss - SFXN2 ENSG00000156398 CDS Human protein_coding chr10:104486809 chr10:104486811 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_52308 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:104486784-104486814
64251 chr5 32712331 32712331 1 + G T THYM 32712329 + 32712309 32712349 41 GTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTC GTGGCCCGGCTTGCATCGCACTTGGACCTGCCCATGCTGTC < 41bp 0.822445282251116 0.505128379074528 0.76511115 0.31117558 prediction 0.634633806353177 Functional Loss - NPR3 ENSG00000113389 CDS Human protein_coding chr5:32712329 chr5:32712331 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_52314 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:32712303-32712354
64251 chr1 65143906 65143906 1 + G T LUSC 65143903 + 65143883 65143923 41 ACAGTGATGGAAAGACTCACCTGGACAAACCCTACTGTGCC ACAGTGATGGAAAGACTCACCTGTACAAACCCTACTGTGCC < 41bp 0.817292637130258 0.469607576528111 0.43616217 0.31174058 prediction 0.634585274260517 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65143903 chr1:65143906 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52316 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:65143894-65143909
64251 chr2 162279953 162279953 1 + G T LUAD 162279951 + 162279931 162279971 41 GCCGCGCTCGCAGATCGTGCCCGGGGCCCGCTACGCCATGG GCCGCGCTCGCAGATCGTGCCCTGGGCCCGCTACGCCATGG < 41bp 0.817281674139558 0.489012264091944 0.9351363 0.0838511 prediction 0.634563348279116 Functional Loss - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162279951 chr2:162279953 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52318 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:162279925-162279968
64251 chr1 154401785 154401785 1 + G T LUAD 154401783 + 154401763 154401803 41 CTGGGTGCTCAGGAAGCCGGCTGCAGGCTCCCACCCCAGCA CTGGGTGCTCAGGAAGCCGGCTTCAGGCTCCCACCCCAGCA < 41bp 0.817264862817178 0.499998560559209 0.35892442 0.3245536 prediction 0.634529725634355 Functional Loss - IL6R ENSG00000160712 CDS Human protein_coding chr1:154401783 chr1:154401785 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_52320 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:154401785-154401786
64251 chr11 64789292 64789292 1 + G T UCEC 64789289 + 64789269 64789309 41 TGCCGGGCATCGACTGGCTCCTGGATGACATTTCCAGCCGC TGCCGGGCATCGACTGGCTCCTGTATGACATTTCCAGCCGC < 41bp 0.817262722392942 0.465379883751326 0.49629486 0.04230514 prediction 0.634525444785884 Functional Loss - ARL2 ENSG00000213465 CDS Human protein_coding chr11:64789289 chr11:64789292 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_52321 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64789252-64789295
64251 chr5 140021484 140021484 1 + G T SARC 140021482 + 140021462 140021502 41 GGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCA GGCAGCATGCGGACCCTGGTCGTGCTCCTGACCAGCAACCA < 41bp 0.825158205008936 0.507905769437873 0.7920431 0.20347431 prediction 0.634504871142126 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140021482 chr5:140021484 nonsynonymous SNV 0.906 2 23 hm5C_associated_SNPs_52323 0 0 3 EFTUD2 POSTAR2 ENCODE chr5:140021410-140021501
64251 chr19 54649779 54649779 1 + G T LUSC 54649776 + 54649756 54649796 41 CCCAGCCCAGCCAACTGTACCACGGTGAGGCCCCACGGGAC CCCAGCCCAGCCAACTGTACCACTGTGAGGCCCCACGGGAC < 41bp 0.817229408040437 0.44094910846467 0.43363988 0.17648387 prediction 0.634458816080875 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54649776 chr19:54649779 synonymous SNV . 0 24 hm5C_associated_SNPs_52327 0 0 2 PRPF8 POSTAR2 ENCODE chr19:54649774-54649852
64251 chr7 36194773 36194773 1 + G T LUAD 36194770 + 36194750 36194790 41 GTGGAGAAGGCCAACAACCCCGGGGTGCGAGAGGTGGTGTG GTGGAGAAGGCCAACAACCCCGGTGTGCGAGAGGTGGTGTG < 41bp 0.872890000893573 0.555666860357897 0.9005841 0.656116 prediction 0.634446281071353 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194770 chr7:36194773 synonymous SNV . 0 24 hm5C_associated_SNPs_52331 0 0 4 BUD13 POSTAR2 ENCODE chr7:36194742-36194812
64251 chr19 45452429 45452429 1 + A C rs5126 45452425 + 45452405 45452445 41 TTTCTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCAT TTTCTCCCCAGGGACTTGTACAGCCAAAGCACAGCAGCCAT < 41bp 0.817211359175782 0.437582036563574 0.15463659 0.20533395 prediction 0.634422718351564 Functional Loss - APOC2 ENSG00000224916;ENSG00000234906 CDS Human other chr19:45452425 chr19:45452429 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_52335 1 0 2 DDX55 POSTAR2 ENCODE chr19:45452415-45452451
64251 chr1 11894362 11894362 1 + G T KIRC 11894359 + 11894339 11894379 41 GGTGCAGCGGCTTTCTTGGGCGGGGTGGTCCGCATGACCAT GGTGCAGCGGCTTTCTTGGGCGGTGTGGTCCGCATGACCAT < 41bp 0.886809286443033 0.569635867561472 0.6486671 0.19406897 prediction 0.634346837763123 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11894359 chr1:11894362 synonymous SNV . 0 24 hm5C_associated_SNPs_52339 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr1:11894360-11894381
64251 chr19 42794466 42794466 1 + G T LUSC 42794464 + 42794444 42794484 41 CCCACTGGACCCTGAGCCCCCAGGGCCCCCGGATCCTCCTG CCCACTGGACCCTGAGCCCCCATGGCCCCCGGATCCTCCTG < 41bp 0.817173365242069 0.479900878652987 0.90229344 0.33231354 prediction 0.634346730484137 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42794464 chr19:42794466 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52340 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:42794437-42794491
64251 chr12 56625323 56625323 1 + G T COAD 56625321 + 56625301 56625341 41 GACTGGACGGGCTGCATCCCCAGCTGCAGACAATTCCACAC GACTGGACGGGCTGCATCCCCATCTGCAGACAATTCCACAC < 41bp 0.817159900523814 0.497773912564576 0.42507547 0.19679096 prediction 0.634319801047628 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625321 chr12:56625323 nonsynonymous SNV 0.043 0 23 hm5C_associated_SNPs_52342 0 0 2 PPIG POSTAR2 ENCODE chr12:56625283-56625330
64251 chr10 134158049 134158049 1 + G T PRAD 134158046 + 134158026 134158066 41 TGAACCTAAGACACTGCCCTCTGGAATTCCCTCCTCAGCTC TGAACCTAAGACACTGCCCTCTGTAATTCCCTCCTCAGCTC < 41bp 0.817144106364582 0.452865696936338 0.36359158 0.08529043 prediction 0.634288212729164 Functional Loss - LRRC27 ENSG00000148814 CDS Human protein_coding chr10:134158046 chr10:134158049 stopgain 0.975 1 24 hm5C_associated_SNPs_52344 0 0 2 BUD13 POSTAR2 ENCODE chr10:134157993-134158068
64251 chr22 41865186 41865186 1 + G T LUAD 41865184 + 41865164 41865204 41 GCCTACTGGTGACTCGGCTGCAGGTGAGCGAGCTCAGGGAC GCCTACTGGTGACTCGGCTGCATGTGAGCGAGCTCAGGGAC < 41bp 0.827275302006288 0.510168595258631 0.9100392 0.323968 prediction 0.634213413495313 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41865184 chr22:41865186 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_52348 0 0 5 DDX3X POSTAR2 ENCODE chr22:41865133-41865200
64251 chr11 9430143 9430143 1 + G T UCEC 9430140 + 9430120 9430160 41 AAGAAGATCGCCATTGTATTCGAGAAAATATTGTAGAAGCC AAGAAGATCGCCATTGTATTCGATAAAATATTGTAGAAGCC < 41bp 0.817101242745149 0.482138950402232 0.21697554 0.07484615 prediction 0.634202485490297 Functional Loss - IPO7 ENSG00000205339 CDS Human protein_coding chr11:9430140 chr11:9430143 stopgain 1.000 1 24 hm5C_associated_SNPs_52351 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:9430053-9430180
64251 chr1 63300503 63300503 1 + A C DLBC 63300499 + 63300479 63300519 41 TGCCAATCTTTTGTAGATGTCAGCATAAAGGATTTCCCTCT TGCCAATCTTTTGTAGATGTCAGCCTAAAGGATTTCCCTCT < 41bp 0.817084246149422 0.440358855912489 0.17254457 0.21325663 prediction 0.634168492298845 Functional Loss - ATG4C ENSG00000125703 CDS Human protein_coding chr1:63300499 chr1:63300503 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_52354 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221658 chr1:63300500-63300520
64251 chr7 106509334 106509334 1 + G T LUSC 106509332 + 106509312 106509352 41 GGTAAAGCTCCAGCACTGTCCAGCAAGGCCTCTGCAGAGTC GGTAAAGCTCCAGCACTGTCCATCAAGGCCTCTGCAGAGTC < 41bp 0.817072561696272 0.497187301183184 0.07799554 0.078223854 prediction 0.634145123392544 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509332 chr7:106509334 nonsynonymous SNV 0.120 0 23 hm5C_associated_SNPs_52356 0 0 1 FXR2 POSTAR2 ENCODE chr7:106509266-106509337
64251 chr2 176983930 176983930 1 + G T COAD 176983927 + 176983907 176983947 41 TGAGCCGAGAGAACCGGATCCGAGAACTGACCGCCAACCTC TGAGCCGAGAGAACCGGATCCGATAACTGACCGCCAACCTC < 41bp 0.859646513744365 0.542582438171469 0.6986421 0.13222146 prediction 0.634128151145792 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983927 chr2:176983930 stopgain 1.000 1 24 hm5C_associated_SNPs_52358 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:176983858-176983953
64251 chr14 101201182 101201182 1 + G T UCEC 101201179 + 101201159 101201199 41 GCCGTCAACATCATCTTCCCCGAGAAGATCGACATGACCAC GCCGTCAACATCATCTTCCCCGATAAGATCGACATGACCAC < 41bp 0.865140774967023 0.548102894508549 0.06065327 0.06579974 prediction 0.634075760916948 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101201179 chr14:101201182 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52362 0 0 2 RPS3 POSTAR2 ENCODE chr14:101201133-101201190
64251 chr22 33245471 33245471 1 + G T LUAD 33245468 + 33245448 33245488 41 CCAAGGTGGTGGGGAAGAAGCTGGTAAAGGAGGGGCCCTTC CCAAGGTGGTGGGGAAGAAGCTGTTAAAGGAGGGGCCCTTC < 41bp 0.877265373603072 0.5602299655001 0.6705385 0.5403806 prediction 0.634070816205942 Functional Loss - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33245468 chr22:33245471 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52363 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:33245471-33245472
64251 chr16 84695577 84695577 1 + G T UCEC 84695574 + 84695554 84695594 41 TGGGAGAACACTGCCTTCTCCAAGACCGTGCAGGTGTACGA TGGGAGAACACTGCCTTCTCCAATACCGTGCAGGTGTACGA < 41bp 0.817029066271315 0.461295782425147 0.33709383 0.047685534 prediction 0.634058132542629 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695574 chr16:84695577 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_52364 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:84695536-84695577
64251 chr1 203008326 203008326 1 + G T LUAD 203008323 + 203008303 203008343 41 GCCGGCTCCAGGATGCCATACACGAGCGGGACCAGCTCCAG GCCGGCTCCAGGATGCCATACACTAGCGGGACCAGCTCCAG < 41bp 0.817001149564021 0.45336293712588 0.19928685 0.13322598 prediction 0.634002299128042 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203008323 chr1:203008326 stopgain 0.963 1 24 hm5C_associated_SNPs_52366 0 0 1 BUD13 POSTAR2 ENCODE chr1:203008313-203008360
64251 chr15 23811593 23811593 1 + G T HNSC 23811590 + 23811570 23811610 41 GCCGCTGGGTTGCATCTGCCCCCGAGGCTCCTCTACAGAGC GCCGCTGGGTTGCATCTGCCCCCTAGGCTCCTCTACAGAGC < 41bp 0.816980334548233 0.4485326723619 0.02184406 0.003081262 prediction 0.633960669096465 Functional Loss - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811590 chr15:23811593 stopgain 0.004 0 24 hm5C_associated_SNPs_52368 0 0 1 RBM15 POSTAR2 ENCODE chr15:23811547-23811601
64251 chr20 37378814 37378814 1 + G T BLCA 37378811 + 37378791 37378831 41 TACCACAATAAGCCAAAGAACTCGATGTGCAGTGGGCTAAT TACCACAATAAGCCAAAGAACTCTATGTGCAGTGGGCTAAT < 41bp 0.864668062537088 0.547695871749243 0.550255 0.46852592 prediction 0.633944381575692 Functional Loss - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37378811 chr20:37378814 synonymous SNV . 0 24 hm5C_associated_SNPs_52372 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:37378811-37378849
64251 chrX 38525426 38525426 1 + G T LUAD 38525423 + 38525403 38525443 41 GAGTCTGGGGCAAACTTACTCTGGGCACCTATATCTCCCTT GAGTCTGGGGCAAACTTACTCTGTGCACCTATATCTCCCTT < 41bp 0.875015492983319 0.558083039630972 0.3908826 0.14143056 prediction 0.633864906704693 Functional Loss - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38525423 chrX:38525426 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52376 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chrX:38525403-38525447
64251 chr1 45226293 45226293 1 + G T UCEC 45226290 + 45226270 45226310 41 ATCAGGGCCCTGGGACAGAACAAGGCTCACACCCCGTTCCG ATCAGGGCCCTGGGACAGAACAATGCTCACACCCCGTTCCG < 41bp 0.882537670681837 0.565616359372744 0.90251696 0.28878534 prediction 0.633842622618186 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45226290 chr1:45226293 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52377 0 0 1 RPS5 POSTAR2 ENCODE chr1:45226247-45226293
64251 chr5 33457488 33457488 1 + G T LUAD 33457485 + 33457465 33457505 41 TCCAAGAGGAAGCTAAAAACCGAGATCATAGGAAAATTGGC TCCAAGAGGAAGCTAAAAACCGATATCATAGGAAAATTGGC < 41bp 0.816889654097657 0.473887124528978 0.4363864 0.118524194 prediction 0.633779308195315 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33457485 chr5:33457488 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52380 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:33457470-33457496
64251 chr22 19119619 19119619 1 - C A LUSC 19119622 - 19119602 19119642 41 CGCAGGTCAGGTTCTTGGAGCGCGGGAAGTCCACACGGTGC CGCAGGTCAGGTTCTTGGAGCGCTGGAAGTCCACACGGTGC < 41bp 0.816849494815481 0.463045216365964 0.83051825 0.3458228 prediction 0.633698989630962 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119622 chr22:19119619 nonsynonymous SNV 0.847 4 24 hm5C_associated_SNPs_52383 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:19119619-19119637
64251 chr10 12111054 12111054 1 + G T UCEC 12111052 + 12111032 12111072 41 CATGGCCTCTGCTACTGCGGCAGCAGCACGACGGGGCCTCG CATGGCCTCTGCTACTGCGGCATCAGCACGACGGGGCCTCG < 41bp 0.816843002958434 0.485790286145154 0.78127956 0.34187424 prediction 0.633686005916868 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12111052 chr10:12111054 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_52385 0 0 1 NCBP2 POSTAR2 ENCODE chr10:12110982-12111073
64251 chr5 56207236 56207236 1 + A C UCEC 56207232 + 56207212 56207252 41 ACAGCAAAGTACCTTTAAACCAGAAGAAATTCTTTACAAGA ACAGCAAAGTACCTTTAAACCAGACGAAATTCTTTACAAGA < 41bp 0.816836647109658 0.438357496149637 0.554418 0.3365909 prediction 0.633673294219316 Functional Loss - SETD9 ENSG00000155542 CDS Human protein_coding chr5:56207232 chr5:56207236 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_52386 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:56207220-56207251
64251 chr1 150131492 150131492 1 + A C UCEC 150131488 + 150131468 150131508 41 AGGGACTGGGAGATGGGAAGCGAAAGGCCAAGGACCCCCCT AGGGACTGGGAGATGGGAAGCGAACGGCCAAGGACCCCCCT < 41bp 0.882888783804 0.566072641010576 0.8039018 0.4436195 prediction 0.633632285586848 Functional Loss - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131488 chr1:150131492 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_52389 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131464-150131517
64251 chr16 20435294 20435294 1 + G T LUSC 20435292 + 20435272 20435312 41 TGGAACACGACTGACACTGGCTGGGTGAAGGCAGCCTGGAC TGGAACACGACTGACACTGGCTTGGTGAAGGCAGCCTGGAC < 41bp 0.816805105498864 0.487210137365041 0.32187665 0.036842883 prediction 0.633610210997728 Functional Loss - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20435292 chr16:20435294 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52390 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20435259-20435385
64251 chr6 27115202 27115202 1 + G T BLCA 27115199 + 27115179 27115219 41 ACGAGGAGCTCAACAAGCTGCTGGGCAAAGTCACCATCGCG ACGAGGAGCTCAACAAGCTGCTGTGCAAAGTCACCATCGCG < 41bp 0.81676412474949 0.46769501339679 0.16180757 0.040234417 prediction 0.63352824949898 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115199 chr6:27115202 nonsynonymous SNV 0.969 4 24 hm5C_associated_SNPs_52392 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:27115180-27115260
64251 chr1 110882515 110882515 1 + G T OV 110882513 + 110882493 110882533 41 GCCGCCTCCTCAGCTCCCGGCGGCGGGGACGGCGCGGAATA GCCGCCTCCTCAGCTCCCGGCGTCGGGGACGGCGCGGAATA < 41bp 0.820107585093218 0.503350512254895 0.8670589 0.45417395 prediction 0.633514145676646 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882513 chr1:110882515 nonsynonymous SNV 0.949 1 23 hm5C_associated_SNPs_52394 0 0 6 BUD13 POSTAR2 ENCODE chr1:110882476-110882529
64251 chr19 50302620 50302620 1 + G T LUAD 50302618 + 50302598 50302638 41 TGGTTCGGGCCTGCAACCAGCTGGGCCAGTTCCTGCAGCAC TGGTTCGGGCCTGCAACCAGCTTGGCCAGTTCCTGCAGCAC < 41bp 0.828351840116214 0.511600124015927 0.9074614 0.56748706 prediction 0.633503432200575 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302618 chr19:50302620 synonymous SNV . 0 23 hm5C_associated_SNPs_52395 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50302612-50302636
64251 chr2 178977514 178977514 1 + A C LUSC 178977510 + 178977490 178977530 41 TTCGCCCGCAGCTCACAGGCCTGCAGGGCCATGGAGGAGAT TTCGCCCGCAGCTCACAGGCCTGCCGGGCCATGGAGGAGAT < 41bp 0.890001422988517 0.573255725255993 0.11446592 0.054014742 prediction 0.633491395465049 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977510 chr2:178977514 synonymous SNV . 0 25 hm5C_associated_SNPs_52396 0 0 1 GRWD1 POSTAR2 ENCODE chr2:178977376-178977552
64251 chr14 21464377 21464377 1 + G T UCEC 21464374 + 21464354 21464394 41 TTATGTGTTCACAGTGTCCCCATGAACTCCCTTGTCCCCAG TTATGTGTTCACAGTGTCCCCATTAACTCCCTTGTCCCCAG < 41bp 0.816740913244097 0.449609565523364 0.18347186 0.101523876 prediction 0.633481826488193 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464374 chr14:21464377 stopgain 1.000 1 24 hm5C_associated_SNPs_52399 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21464351-21464393
64251 chrX 47028850 47028850 1 + G T LUAD 47028847 + 47028827 47028867 41 ATCCTCGCGAGTATGGCAGCCAGGAGGGCAAGCATGACTAT ATCCTCGCGAGTATGGCAGCCAGTAGGGCAAGCATGACTAT < 41bp 0.868066912024761 0.551354172245889 0.77373815 0.30131334 prediction 0.633425479557744 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47028847 chrX:47028850 stopgain 1.000 0 24 hm5C_associated_SNPs_52401 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:47028843-47028875
64251 chr6 27861429 27861429 1 + G T UCS 27861426 + 27861406 27861446 41 TCATCGAAGGCCATGGGCATCATGAACTCCTTCGTCAATGA TCATCGAAGGCCATGGGCATCATTAACTCCTTCGTCAATGA < 41bp 0.816702986721658 0.473748559040787 0.10137963 0.07050231 prediction 0.633405973443315 Functional Loss - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861426 chr6:27861429 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52402 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:27861280-27861460
64251 chrX 105970514 105970514 1 + G T LUAD 105970512 + 105970492 105970532 41 TTGGCCCTCATCCAACGCGGCGGGGGCTGCACCTTCGCAGA TTGGCCCTCATCCAACGCGGCGTGGGCTGCACCTTCGCAGA < 41bp 0.816684902012459 0.476385268093453 0.914101 0.38827723 prediction 0.633369804024919 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970512 chrX:105970514 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_52403 0 0 2 SND1 POSTAR2 ENCODE chrX:105970438-105970523
64251 chr1 235582807 235582807 1 + G T UCEC 235582804 + 235582784 235582824 41 GCAGTCAGCTGAGCAAGTTGCAAGAAGTTTCTCTGAGGAAC GCAGTCAGCTGAGCAAGTTGCAATAAGTTTCTCTGAGGAAC < 41bp 0.816681249106337 0.4547361583958 0.48419577 0.19690487 prediction 0.633362498212675 Functional Loss - TBCE ENSG00000116957 CDS Human protein_coding chr1:235582804 chr1:235582807 stopgain 0.469 0 24 hm5C_associated_SNPs_52404 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:235582753-235582861
64251 chr7 99722500 99722500 1 + G T UCEC 99722497 + 99722477 99722517 41 GAAGCCACCCCAAACTTGACCGAGAAGATCTTTGACCCTTG GAAGCCACCCCAAACTTGACCGATAAGATCTTTGACCCTTG < 41bp 0.816666346214327 0.460100154829222 0.32434303 0.091708064 prediction 0.633332692428654 Functional Loss - CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99722497 chr7:99722500 stopgain 0.827 0 24 hm5C_associated_SNPs_52406 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99722491-99722515
64251 chr19 40478462 40478462 1 + G T UCEC 40478460 + 40478440 40478480 41 AGCCATCGTGGGCTCTACCACAGGTGTGCTAAGGACACCTC AGCCATCGTGGGCTCTACCACATGTGTGCTAAGGACACCTC < 41bp 0.817763132706217 0.501132654726179 0.9045093 0.34295046 prediction 0.633260955960076 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40478460 chr19:40478462 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_52411 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:40478402-40478462
64251 chr1 28661142 28661142 1 + G T GBM 28661139 + 28661119 28661159 41 GGACAGCCAGAAATGGGAGACAAGAACCGCCATGCCCTGGT GGACAGCCAGAAATGGGAGACAATAACCGCCATGCCCTGGT < 41bp 0.816618583056653 0.473508128821377 0.40414196 0.20281717 prediction 0.633237166113306 Functional Loss - MED18 ENSG00000130772 CDS Human protein_coding chr1:28661139 chr1:28661142 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_52413 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:28661135-28661159
64251 chr7 94293271 94293271 1 + G T LUAD 94293269 + 94293249 94293289 41 CCGTGCTGCCCGTTGGGCCTCAGCAAAGCTGGAGCGCTCCC CCGTGCTGCCCGTTGGGCCTCATCAAAGCTGGAGCGCTCCC < 41bp 0.830868816159796 0.514277216853112 0.1295963 0.0877839 prediction 0.633183198613368 Functional Loss - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293269 chr7:94293271 nonsynonymous SNV 0.042 0 23 hm5C_associated_SNPs_52417 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:94293253-94293279
64251 chr3 158261250 158261250 1 + G T UCEC 158261247 + 158261227 158261267 41 TCCCTACTGCTATCAAGTACCAAGATGACAATTCCCTGGCC TCCCTACTGCTATCAAGTACCAATATGACAATTCCCTGGCC < 41bp 0.820071747725499 0.503509880462435 0.11445719 0.03487426 prediction 0.633123734526128 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:158261247 chr3:158261250 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52423 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:158261154-158261261
64251 chr1 32660790 32660790 1 + G T HNSC 32660787 + 32660767 32660807 41 CCTCAAGAGCCCACCTCCGCCAGGGCCTAGAGAGCCTGGTG CCTCAAGAGCCCACCTCCGCCAGTGCCTAGAGAGCCTGGTG < 41bp 0.870690790308236 0.554146942034459 0.8682915 0.2049469 prediction 0.633087696547554 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32660787 chr1:32660790 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_52425 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32660780-32660800
64251 chr19 17448962 17448962 1 + G T PAAD 17448960 + 17448940 17448980 41 CCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCCC CCACGCCCTCCGAATTCTCACATCACCCCGAGACCTGCCCC < 41bp 0.816530989821329 0.481806676421763 0.42946076 0.10242829 prediction 0.633061979642658 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17448960 chr19:17448962 nonsynonymous SNV 0.149 2 23 hm5C_associated_SNPs_52428 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:17448940-17449015
64251 chr20 25656199 25656199 1 - C A UCEC 25656202 - 25656182 25656222 41 GGGGAAAGGCCATTTAATTGCAAGGATTGCGGGCGAGGCTT GGGGAAAGGCCATTTAATTGCAATGATTGCGGGCGAGGCTT < 41bp 0.816513407008173 0.436809864021304 0.36462173 0.12342608 prediction 0.633026814016347 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656202 chr20:25656199 nonsynonymous SNV 0.034 0 24 hm5C_associated_SNPs_52430 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:25656194-25656207
64251 chr16 67576309 67576309 1 + A C UCEC 67576305 + 67576285 67576325 41 GTCCACAGACTCTGGCCCTTCAGAACTGCCAGGCCCCACTC GTCCACAGACTCTGGCCCTTCAGACCTGCCAGGCCCCACTC < 41bp 0.816498126100191 0.43061998938043 0.5958861 0.37232375 prediction 0.632996252200383 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67576305 chr16:67576309 nonsynonymous SNV 0.020 0 25 hm5C_associated_SNPs_52432 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67576307-67576335
64251 chr3 53217201 53217201 1 + G T LUAD 53217198 + 53217178 53217218 41 ATCGGCAGATGCACTGGCACCGCGGCCAACAGCCGGGACAC ATCGGCAGATGCACTGGCACCGCTGCCAACAGCCGGGACAC < 41bp 0.88168715498064 0.565219941202517 0.4561993 0.062434047 prediction 0.632934427556246 Functional Loss - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53217198 chr3:53217201 synonymous SNV . 0 24 hm5C_associated_SNPs_52437 0 0 1 GRWD1 POSTAR2 ENCODE chr3:53217155-53217211
64251 chr7 45928308 45928308 1 + G T STAD 45928306 + 45928286 45928326 41 TACTGCTCCTGCTGACTGTCCAGGTCGGCGTGACAGCCGGC TACTGCTCCTGCTGACTGTCCATGTCGGCGTGACAGCCGGC < 41bp 0.832596930898115 0.516145213689996 0.749375 0.35555443 prediction 0.632903434416238 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45928306 chr7:45928308 nonsynonymous SNV 0.050 0 23 hm5C_associated_SNPs_52440 0 0 10 AUH POSTAR2 ENCODE chr7:45928294-45928326
64251 chrX 136649796 136649796 1 + G T SKCM 136649793 + 136649773 136649813 41 CTTTCAAGGCGAAGTACAAACTGGTCAACCACATCCGAGTG CTTTCAAGGCGAAGTACAAACTGTTCAACCACATCCGAGTG < 41bp 0.867801179655992 0.551366672150586 0.17045173 0.16891116 prediction 0.63286901501081 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649793 chrX:136649796 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_52442 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:136649783-136649823
64251 chr12 52448886 52448886 1 + G T LUSC 52448883 + 52448863 52448903 41 ACCTCAACCAAGGCCCGGAGCGGGGCCCCAGGTGGAAGTGA ACCTCAACCAAGGCCCGGAGCGGTGCCCCAGGTGGAAGTGA < 41bp 0.816415396329222 0.433022761715807 0.92472386 0.25091296 prediction 0.632830792658444 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448883 chr12:52448886 synonymous SNV . 0 24 hm5C_associated_SNPs_52444 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:52448882-52448919
64251 chr10 5495517 5495517 1 + G T THYM 5495514 + 5495494 5495534 41 GAGCAGATTGGTCACATTCTCGTGAGCTGGGTATGTAGTGA GAGCAGATTGGTCACATTCTCGTTAGCTGGGTATGTAGTGA < 41bp 0.81639068626636 0.457619866662659 0.8462665 0.095936924 prediction 0.63278137253272 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5495514 chr10:5495517 synonymous SNV . 0 24 hm5C_associated_SNPs_52447 0 0 15 FMR1 POSTAR2 GSE39682,GSM977616 chr10:5495504-5495523
64251 chr7 6631442 6631442 1 + A T LUAD 6631438 + 6631418 6631458 41 AGCTTGTTGGGAAAACTGGTCTCCATGGCGGTGGCTGTGTG AGCTTGTTGGGAAAACTGGTCTCCTTGGCGGTGGCTGTGTG < 41bp 0.827919825043707 0.511547950440478 0.947509 0.37723547 prediction 0.632743749206459 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631438 chr7:6631442 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_52448 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:6631428-6631451
64251 chr2 100013284 100013284 1 + G T THCA 100013281 + 100013261 100013301 41 CTCAGTACATTTTTAATTCTCGAGATCCGATAGTGATGGGG CTCAGTACATTTTTAATTCTCGATATCCGATAGTGATGGGG < 41bp 0.854461314816311 0.538096740207343 0.8666283 0.35341692 prediction 0.632729149217938 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:100013281 chr2:100013284 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52449 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:100013247-100013288
64251 chr20 21327089 21327089 1 + G T UCEC 21327086 + 21327066 21327106 41 GGCTGGAAGCAGCGGTACTACAAGAACAAATTTGATGTGGA GGCTGGAAGCAGCGGTACTACAATAACAAATTTGATGTGGA < 41bp 0.81635974947991 0.457708821135095 0.5210295 0.19930515 prediction 0.63271949895982 Functional Loss - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21327086 chr20:21327089 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52452 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:21327072-21327135
64251 chr20 61460839 61460839 1 + G T STAD 61460836 + 61460816 61460856 41 GGACGAGCGGGGTCCAAAGGCGAGAAGGGAGAACGGGTATG GGACGAGCGGGGTCCAAAGGCGATAAGGGAGAACGGGTATG < 41bp 0.872612055877084 0.556273975218729 0.73283195 0.49554488 prediction 0.632676161316709 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61460836 chr20:61460839 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52454 0 0 5 GRSF1 POSTAR2 ENCODE chr20:61460839-61460852
64251 chr16 89652141 89652141 1 + G T SARC 89652139 + 89652119 89652159 41 CGAGGAAAGCACGACTTCATCGGAGAATTCTCTACCACCTT CGAGGAAAGCACGACTTCATCGTAGAATTCTCTACCACCTT < 41bp 0.816333548186517 0.493204258848937 0.91267234 0.509711 prediction 0.632667096373035 Functional Loss - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89652139 chr16:89652141 nonsynonymous SNV 0.340 4 23 hm5C_associated_SNPs_52456 0 0 1 UCHL5 POSTAR2 ENCODE chr16:89652140-89652193
64251 chr10 64565515 64565515 1 + G T UCEC 64565512 + 64565492 64565532 41 GTGCTGGAGCCGGTCAGGCCCAAGGAGGCCTCCAGCTCGGC GTGCTGGAGCCGGTCAGGCCCAATGAGGCCTCCAGCTCGGC < 41bp 0.869096691241157 0.552776445776022 0.8978509 0.27038836 prediction 0.632640490930269 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64565512 chr10:64565515 nonsynonymous SNV 0.768 0 24 hm5C_associated_SNPs_52459 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64565354-64565541
64251 chr10 3175452 3175452 1 + A C UCEC 3175448 + 3175428 3175468 41 CTTCATTTACCAGCTGTATTCAGAAGAGGGCAAAGGCGTGT CTTCATTTACCAGCTGTATTCAGACGAGGGCAAAGGCGTGT < 41bp 0.816310201657248 0.429879196087855 0.8628688 0.8856108 prediction 0.632620403314496 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3175448 chr10:3175452 nonsynonymous SNV 0.540 3 25 hm5C_associated_SNPs_52460 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:3175440-3175460
64251 chr1 249211640 249211640 1 + G T LIHC 249211638 + 249211618 249211658 41 CGGGGGTCCAAGCAGCTGCACAGGGGGAAGCCTGTGCGACT CGGGGGTCCAAGCAGCTGCACATGGGGAAGCCTGTGCGACT < 41bp 0.834480929759986 0.518181373082183 0.92836857 0.8956773 prediction 0.632599113355605 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211638 chr1:249211640 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_52461 0 0 4 RBM15 POSTAR2 ENCODE chr1:249211604-249211644
64251 chrX 68836251 68836251 1 + G T LUSC 68836248 + 68836228 68836268 41 GGGTGTGGCGGGGCCCCTGCCCGGGCGGGCGAAGGGAACAG GGGTGTGGCGGGGCCCCTGCCCGTGCGGGCGAAGGGAACAG < 41bp 0.816295872436492 0.475735122236971 0.7424509 0.25470492 prediction 0.632591744872984 Functional Loss - EDA ENSG00000158813 CDS Human protein_coding chrX:68836248 chrX:68836251 synonymous SNV . 0 24 hm5C_associated_SNPs_52462 0 0 2 DDX3X POSTAR2 ENCODE chrX:68836148-68836269
64251 chr12 122380855 122380855 1 + G T LUAD 122380852 + 122380832 122380872 41 TGGAAACGCCAGCATGCACTCTCGAACTCCCCACAGAGTAC TGGAAACGCCAGCATGCACTCTCTAACTCCCCACAGAGTAC < 41bp 0.872027474730225 0.555742087802988 0.4008279 0.81748927 prediction 0.632570773854475 Functional Loss - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122380852 chr12:122380855 stopgain 0.002 0 24 hm5C_associated_SNPs_52463 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:122380849-122380887
64251 chr9 130420727 130420727 1 + G T COAD 130420724 + 130420704 130420744 41 GTGTATCTCATCACTCCATCCGAGAAGGTAAACCTTCCACC GTGTATCTCATCACTCCATCCGATAAGGTAAACCTTCCACC < 41bp 0.816280468623976 0.450095098592451 0.87555003 0.23603234 prediction 0.632560937247952 Functional Loss - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130420724 chr9:130420727 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_52465 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:130420725-130420762
64251 chr12 119591400 119591400 1 + G T UCEC 119591398 + 119591378 119591418 41 TCTGGCAAGAGGAGCCCGCCCAGCAGAAGCTCTAGGTCCCG TCTGGCAAGAGGAGCCCGCCCATCAGAAGCTCTAGGTCCCG < 41bp 0.829063034683498 0.512937871792726 0.53119385 0.20452103 prediction 0.632250325781544 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119591398 chr12:119591400 nonsynonymous SNV 0.949 3 23 hm5C_associated_SNPs_52473 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119591400-119591420
64251 chr5 140731312 140731312 1 + G T SKCM 140731310 + 140731290 140731330 41 TGGCCAGTGACCTGGAGCCGCGGGAGCTGTTGTCCTACGTG TGGCCAGTGACCTGGAGCCGCGTGAGCTGTTGTCCTACGTG < 41bp 0.816117205880784 0.488009202229566 0.93615746 0.9032297 prediction 0.632234411761568 Functional Loss - PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140731310 chr5:140731312 synonymous SNV . 0 23 hm5C_associated_SNPs_52475 0 0 1 SND1 POSTAR2 ENCODE chr5:140731303-140731367
64251 chr18 3277806 3277806 1 + G T LUAD 3277803 + 3277783 3277823 41 CTAAGAGAGCTGCTGACAACCATGGGGGATCGGTTTACAGA CTAAGAGAGCTGCTGACAACCATTGGGGATCGGTTTACAGA < 41bp 0.816108732067703 0.45801606929723 0.63161206 0.038669795 prediction 0.632217464135405 Functional Loss - MYL12B ENSG00000118680 CDS Human protein_coding chr18:3277803 chr18:3277806 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_52476 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr18:3277775-3277809
64251 chr19 32968497 32968497 1 + G T SARC 32968494 + 32968474 32968514 41 CTGGCCGGAGTCAAGCTGTGCACGGGAAGGACCCTAACCAA CTGGCCGGAGTCAAGCTGTGCACTGGAAGGACCCTAACCAA < 41bp 0.81609558920365 0.461147284704504 0.6047404 0.2914909 prediction 0.6321911784073 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32968494 chr19:32968497 synonymous SNV . 0 24 hm5C_associated_SNPs_52479 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:32968468-32968500
64251 chr2 85866372 85866372 1 + A C LUAD 85866368 + 85866348 85866388 41 TGCTCCATAATGACGAGTACCAGGAGACAATGGTGGAGTCC TGCTCCATAATGACGAGTACCAGGCGACAATGGTGGAGTCC < 41bp 0.884827969933509 0.568792387479641 0.9255396 0.9221022 prediction 0.632071164907734 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85866368 chr2:85866372 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_52487 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:85866355-85866419
64251 chr15 25321010 25321010 1 + G T BLCA 25321007 + 25320987 25321027 41 CTTCAGGCTGGTGGATACCTCAGGATGGTAAGTATTGGTTT CTTCAGGCTGGTGGATACCTCAGTATGGTAAGTATTGGTTT < 41bp 0.816008215239726 0.481556939994036 0.7207537 0.23386136 prediction 0.632016430479452 Functional Loss - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25321007 chr15:25321010 . . 0 24 hm5C_associated_SNPs_52491 0 0 5 EIF3D POSTAR2 ENCODE chr15:25320919-25321016
64251 chr3 62304802 62304802 1 + G T rs2293555 62304799 + 62304779 62304819 41 CGCAGGGCCTTGCAGGACCGCTGGGGAGGATGTTGTTAACG CGCAGGGCCTTGCAGGACCGCTGTGGAGGATGTTGTTAACG < 41bp 0.815977905063777 0.46769784945387 0.45027682 0.3250361 prediction 0.631955810127554 Functional Loss - C3orf14 ENSG00000241472 ncRNA_intronic Human processed_transcript chr3:62304799 chr3:62304802 . . 0 24 hm5C_associated_SNPs_52493 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:62304781-62304813
64251 chr15 44620907 44620907 1 + A C UCEC 44620903 + 44620883 44620923 41 AGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAA AGCAACTTGCTGAGCTTCGTCAGGCATTTCTTCGACAAGAA < 41bp 0.886613092105809 0.570665058618175 0.67336464 0.66181076 prediction 0.631896066975269 Functional Loss - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44620903 chr15:44620907 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_52495 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:44620884-44620916
64251 chr11 2937874 2937874 1 + G T KIRP 2937871 + 2937851 2937891 41 GGATTCAGTGCCCGGCCATCCTGGCTGCCCTGGCCACCCTC GGATTCAGTGCCCGGCCATCCTGTCTGCCCTGGCCACCCTC < 41bp 0.815947834609861 0.437989484168257 0.8271159 0.2795952 prediction 0.631895669219721 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2937871 chr11:2937874 nonsynonymous SNV 0.023 1 24 hm5C_associated_SNPs_52496 0 0 1 DDX24 POSTAR2 ENCODE chr11:2937798-2937917
64251 chr15 40764099 40764099 1 + G T UCEC 40764096 + 40764076 40764116 41 GCCTACCGCAACAAGTTTGGCGAGATCCGAGAGTACCAGCA GCCTACCGCAACAAGTTTGGCGATATCCGAGAGTACCAGCA < 41bp 0.8159368957947 0.463777101887823 0.8898047 0.6877121 prediction 0.631873791589401 Functional Loss - CHST14 ENSG00000169105 CDS Human protein_coding chr15:40764096 chr15:40764099 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_52499 0 0 1 SND1 POSTAR2 ENCODE chr15:40764009-40764104
64251 chr16 68112664 68112664 1 + G T GBM 68112661 + 68112641 68112681 41 TGTCTGCTCAGGGACAAGTCCAAGAAACTGGCGGAGCAGGC TGTCTGCTCAGGGACAAGTCCAATAAACTGGCGGAGCAGGC < 41bp 0.815926452344881 0.453289160633291 0.6809217 0.26781315 prediction 0.631852904689763 Functional Loss - DUS2 ENSG00000167264 CDS Human protein_coding chr16:68112661 chr16:68112664 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_52501 0 0 3 PPIG POSTAR2 ENCODE chr16:68112654-68112732
64251 chr19 17885887 17885887 1 + G T LUSC 17885885 + 17885865 17885905 41 AGATTTCCTGGAGCCCGATTCAGGGGTGAGTGATGTGGGAG AGATTTCCTGGAGCCCGATTCATGGGTGAGTGATGTGGGAG < 41bp 0.827698454898776 0.511777686090823 0.95899254 0.8836874 prediction 0.631841537615905 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17885885 chr19:17885887 nonsynonymous SNV 0.964 0 23 hm5C_associated_SNPs_52502 0 0 7 AARS POSTAR2 ENCODE chr19:17885876-17885929
64251 chr2 62132863 62132863 1 + A C PAAD 62132859 + 62132839 62132879 41 GCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGCCCAGGAC GCAAACCCCTGAGCGGGCTGCTGACTGCGCTGGCCCAGGAC < 41bp 0.874027228443828 0.558144928607428 0.91007364 0.7283491 prediction 0.631764599672801 Functional Loss - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62132859 chr2:62132863 nonsynonymous SNV 0.555 1 25 hm5C_associated_SNPs_52506 0 0 3 DDX3X POSTAR2 ENCODE chr2:62132827-62132960
64251 chr7 150094978 150094978 1 + G T SKCM 150094975 + 150094955 150094995 41 CATCCACCAGCGCATCCACACGGGTGAGCGGCCCTACCCGT CATCCACCAGCGCATCCACACGGTTGAGCGGCCCTACCCGT < 41bp 0.868215763996897 0.5523552552543 0.91037405 0.39209062 prediction 0.631721017485194 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150094975 chr7:150094978 nonsynonymous SNV 0.255 3 24 hm5C_associated_SNPs_52508 0 0 1 DDX55 POSTAR2 ENCODE chr7:150094957-150095022
64251 chr11 67258281 67258281 1 + G T SARC 67258278 + 67258258 67258298 41 GACAACGTCAAGGCCTACTTCAAGCGGGGCAAGGCCCACGC GACAACGTCAAGGCCTACTTCAATCGGGGCAAGGCCCACGC < 41bp 0.874789719305738 0.558954541230388 0.54894364 0.18247926 prediction 0.631670356150698 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67258278 chr11:67258281 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_52511 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:67258264-67258290
64251 chr15 29393906 29393906 1 + G T SARC 29393904 + 29393884 29393924 41 GCATGCCCCGGTCAGCCTCTCAGGACTGCATCGAGACCACG GCATGCCCCGGTCAGCCTCTCATGACTGCATCGAGACCACG < 41bp 0.82896891091242 0.51315919136179 0.91668105 0.46963584 prediction 0.63161943910126 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29393904 chr15:29393906 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_52513 0 0 3 MTPAP POSTAR2 ENCODE chr15:29393859-29393966
64251 chr14 50081017 50081017 1 + G T UCEC 50081014 + 50080994 50081034 41 TCATTCCATTCCATCTCTGCCAAGATTTGGATACCGCAAAA TCATTCCATTCCATCTCTGCCAATATTTGGATACCGCAAAA < 41bp 0.81578123706081 0.472495344461769 0.28236184 0.12565926 prediction 0.63156247412162 Functional Loss - LRR1 ENSG00000165501 CDS Human protein_coding chr14:50081014 chr14:50081017 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52517 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:50080994-50081017
64251 chr16 67915010 67915010 1 + A C UCEC 67915006 + 67914986 67915026 41 AATGGCCTTCAGGAAAAGCACAAGAGCCTGGCCTTCCACCG AATGGCCTTCAGGAAAAGCACAAGCGCCTGGCCTTCCACCG < 41bp 0.883000751800615 0.56723574976037 0.40582305 0.37910044 prediction 0.631530004080489 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915006 chr16:67915010 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_52519 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:67915000-67915020
64251 chr1 32498920 32498920 1 + G T UCEC 32498917 + 32498897 32498937 41 GCCCATGCCATGGAGGAAGTCAAGAAATTTCTAGTACCGGT GCCCATGCCATGGAGGAAGTCAATAAATTTCTAGTACCGGT < 41bp 0.864375387315116 0.548610670583817 0.1259776 0.13163835 prediction 0.631529433462599 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32498917 chr1:32498920 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52520 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32498894-32498920
64251 chr7 12680046 12680046 1 + G T UCEC 12680043 + 12680023 12680063 41 GACAAACCGCTCATTATTTACAAGAATGGAACATCAAAGAA GACAAACCGCTCATTATTTACAATAATGGAACATCAAAGAA < 41bp 0.815737940249293 0.464075291495349 0.069391936 0.035736054 prediction 0.631475880498586 Functional Loss - SCIN ENSG00000006747 CDS Human protein_coding chr7:12680043 chr7:12680046 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52524 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:12680044-12680057
64251 chr6 119226836 119226836 1 + G T BRCA 119226833 + 119226813 119226853 41 CTAGGCTGATGCACCTAATCCAGGACTCATTCCAGATGCAG CTAGGCTGATGCACCTAATCCAGTACTCATTCCAGATGCAG < 41bp 0.852631895260513 0.536945171557115 0.3315401 0.07218912 prediction 0.631373447406796 Functional Loss - ASF1A ENSG00000111875 CDS Human protein_coding chr6:119226833 chr6:119226836 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52533 0 0 17 ALKBH5 POSTAR2 GSE38201,GSM936506 chr6:119226820-119226840
64251 chr17 4926984 4926984 1 + G T UCEC 4926982 + 4926962 4927002 41 AGCAGGAGCAGCTACGGCTGCAGGGACTGCAGGGCTCTGGG AGCAGGAGCAGCTACGGCTGCATGGACTGCAGGGCTCTGGG < 41bp 0.828338043981961 0.512662247115577 0.91566217 0.4763251 prediction 0.631351593732768 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926982 chr17:4926984 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_52534 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:4926925-4926986
64251 chr8 90782093 90782093 1 + A C STAD 90782089 + 90782069 90782109 41 CCAGAAGGAGGGACAATTATCTATATGCCACCTGAAAACTA CCAGAAGGAGGGACAATTATCTATCTGCCACCTGAAAACTA < 41bp 0.815656118198208 0.415240461631119 0.5742575 0.17641038 prediction 0.631312236396415 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90782089 chr8:90782093 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_52536 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:90782072-90782102
64251 chr10 75552552 75552552 1 + G T LUAD 75552549 + 75552529 75552569 41 AGAGAAGGCCGAGGGCGGGGCTGGGGAGGAGCACGACCTGT AGAGAAGGCCGAGGGCGGGGCTGTGGAGGAGCACGACCTGT < 41bp 0.815631089518687 0.449320392641682 0.86668605 0.8264338 prediction 0.631262179037373 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75552549 chr10:75552552 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52539 0 0 10 BUD13 POSTAR2 ENCODE chr10:75552540-75552577
64251 chr6 170175417 170175417 1 + G T UCEC 170175415 + 170175395 170175435 41 TTGGGCTCTGCTGCCTTTCCCCGAAGAACTCACTCGGCAAG TTGGGCTCTGCTGCCTTTCCCCTAAGAACTCACTCGGCAAG < 41bp 0.815605316367517 0.486767955572353 0.7515131 0.12299538 prediction 0.631210632735034 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170175415 chr6:170175417 stopgain 0.000 0 23 hm5C_associated_SNPs_52540 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:170175399-170175425
64251 chr7 107399549 107399549 1 + G T COAD 107399546 + 107399526 107399566 41 CACCACCACCTCCACGATTGCAGGGTCCGCCTTCTCAAACC CACCACCACCTCCACGATTGCAGTGTCCGCCTTCTCAAACC < 41bp 0.872006045672071 0.556434939900482 0.94767517 0.86198044 prediction 0.631142211543179 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399546 chr7:107399549 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_52542 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:107399540-107399560
64251 chr11 69458759 69458759 1 + G T STAD 69458757 + 69458737 69458777 41 CTTCGTTGCCCTCTGTGCCACAGGTAGGGCAGGCCCGGCAG CTTCGTTGCCCTCTGTGCCACATGTAGGGCAGGCCCGGCAG < 41bp 0.823079331706998 0.507557544722697 0.4404776 0.29990232 prediction 0.631043573968602 Functional Loss - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69458757 chr11:69458759 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_52546 0 0 3 PRPF8 POSTAR2 ENCODE chr11:69458743-69458806
64251 chr3 169710634 169710634 1 + G T GBM 169710631 + 169710611 169710651 41 TGAGGAGGGGAAAGTAGGACCAGGAAATCATGGAACAGAAG TGAGGAGGGGAAAGTAGGACCAGTAAATCATGGAACAGAAG < 41bp 0.851332768441638 0.535820652571095 0.8611327 0.6710986 prediction 0.631024231741086 Functional Loss - SEC62 ENSG00000008952 CDS Human protein_coding chr3:169710631 chr3:169710634 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_52547 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:169710603-169710724
64251 chr2 231256883 231256883 1 + G T LUAD 231256880 + 231256860 231256900 41 TGAAATCAAAGGAGGCTACGCAAGATCAAAGAACTGGAGGC TGAAATCAAAGGAGGCTACGCAATATCAAAGAACTGGAGGC < 41bp 0.815500431424312 0.442142054566686 0.18993941 0.04490772 prediction 0.631000862848625 Functional Loss - SP140L ENSG00000185404 CDS Human protein_coding chr2:231256880 chr2:231256883 nonsynonymous SNV 0.029 2 24 hm5C_associated_SNPs_52548 0 0 2 UCHL5 POSTAR2 ENCODE chr2:231256801-231256944
64251 chr10 75556724 75556724 1 + G T HNSC 75556722 + 75556702 75556742 41 TGCTCAACCAGGGAGTGTGGCAGGGGCTGGGCCAGGCCCCA TGCTCAACCAGGGAGTGTGGCATGGGCTGGGCCAGGCCCCA < 41bp 0.840611277247881 0.525118548932479 0.93109983 0.8568501 prediction 0.630985456630804 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75556722 chr10:75556724 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_52550 0 0 3 UCHL5 POSTAR2 ENCODE chr10:75556704-75556733
64251 chr12 6646779 6646779 1 + G T LUSC 6646777 + 6646757 6646797 41 TCCATGCCATCACTGCCACCCAGAAGACTGTGGATGGCCCC TCCATGCCATCACTGCCACCCATAAGACTGTGGATGGCCCC < 41bp 0.831564520275951 0.516073090049024 0.6172753 0.06589344 prediction 0.630982860453855 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646777 chr12:6646779 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52551 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6646746-6646784
64251 chr2 204255806 204255806 1 + G T LUSC 204255803 + 204255783 204255823 41 CATGAAGATGGGTGGGCTGCCGCGTACAACACCTCCAACTC CATGAAGATGGGTGGGCTGCCGCTTACAACACCTCCAACTC < 41bp 0.815454511154317 0.470554114826382 0.23386973 0.026120365 prediction 0.630909022308633 Functional Loss - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204255803 chr2:204255806 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_52552 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:204255786-204255806
64251 chr16 58497641 58497641 1 + G T rs574167371 58497638 + 58497618 58497658 41 TGGCTGCCCGCACCTGCACCCGCGCGTCGGCGGCGCCGAAG TGGCTGCCCGCACCTGCACCCGCTCGTCGGCGGCGCCGAAG < 41bp 0.824217456835939 0.508770066178588 0.849552 0.118454695 prediction 0.630894781314702 Functional Loss - NDRG4 ENSG00000103034 UTR5 Human protein_coding chr16:58497638 chr16:58497641 . . 0 24 hm5C_associated_SNPs_52555 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr16:58497640-58497660
64251 chr22 50946826 50946826 1 + G T COAD 50946823 + 50946803 50946843 41 CAGCCCATCCGCGACCTCACCAAGAACTGGGAGGTGGACGT CAGCCCATCCGCGACCTCACCAATAACTGGGAGGTGGACGT < 41bp 0.862751463616525 0.547335783545022 0.48435166 0.08939338 prediction 0.630831360143006 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50946823 chr22:50946826 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52556 0 0 16 CPSF2 POSTAR2 GSE37401,GSM917670 chr22:50946805-50946826
64251 chr7 134346514 134346514 1 + G T LUAD 134346511 + 134346491 134346531 41 TGGGTGCCTGTGGAAAGCTCCTGGCGTCTAAATGAGCGTCA TGGGTGCCTGTGGAAAGCTCCTGTCGTCTAAATGAGCGTCA < 41bp 0.815400391508672 0.456828885717199 0.33532798 0.1456666 prediction 0.630800783017344 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346511 chr7:134346514 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52557 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:134346503-134346544
64251 chr9 139313053 139313053 1 + G T THYM 139313051 + 139313031 139313071 41 GTGTTGAACATGATGATGGGCGGAGGTGGCTCCTTCTCGGC GTGTTGAACATGATGATGGGCGTAGGTGGCTCCTTCTCGGC < 41bp 0.815390635904765 0.487296786079176 0.9073107 0.5757544 prediction 0.63078127180953 Functional Loss - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139313051 chr9:139313053 nonsynonymous SNV 0.733 4 23 hm5C_associated_SNPs_52558 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:139313040-139313060
64251 chr6 26597220 26597220 1 + G T LUAD 26597218 + 26597198 26597238 41 CGTGTCAGTCAACATGGAGGCAGAGGAATCGGAGAAGGCCG CGTGTCAGTCAACATGGAGGCATAGGAATCGGAGAAGGCCG < 41bp 0.829034626091119 0.513737314637804 0.89506775 0.40411445 prediction 0.63059462290663 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597218 chr6:26597220 stopgain 0.005 0 23 hm5C_associated_SNPs_52563 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26597180-26597220
64251 chr6 43029080 43029080 1 + G T UCEC 43029078 + 43029058 43029098 41 GGTCCCCCAGGCCAGGATGTCAGGCCTGGTGTTGGGGCAGC GGTCCCCCAGGCCAGGATGTCATGCCTGGTGTTGGGGCAGC < 41bp 0.815245319040542 0.493607331935017 0.9009136 0.44645602 prediction 0.630490638081084 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43029078 chr6:43029080 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_52567 0 0 9 DDX3X POSTAR2 ENCODE chr6:43029046-43029168
64251 chr1 68151204 68151204 1 + A C rs532285587 68151200 + 68151180 68151220 41 GACTTTGGAGGAATTCTCGGCTGGAGAGCAGAAGACCGAAA GACTTTGGAGGAATTCTCGGCTGGCGAGCAGAAGACCGAAA < 41bp 0.863575004611122 0.548330289131637 0.3306868 0.289778 prediction 0.63048943095897 Functional Loss - GADD45A ENSG00000116717 CDS Human protein_coding chr1:68151200 chr1:68151204 synonymous SNV . 0 25 hm5C_associated_SNPs_52568 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr1:68151167-68151214
64251 chr6 170871001 170871001 1 + G T SARC 170870999 + 170870979 170871019 41 TGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAG TGGAAGAGCAACAAAGGCAGCATCAGCAACAACAACAGCAG < 41bp 0.815198023690844 0.494674386345805 0.33607563 0.019655347 prediction 0.630396047381689 Functional Loss - TBP ENSG00000112592 CDS Human protein_coding chr6:170870999 chr6:170871001 nonsynonymous SNV 0.907 3 23 hm5C_associated_SNPs_52570 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:170870956-170871003
64251 chr15 91017821 91017821 1 + G T BLCA 91017818 + 91017798 91017838 41 AGCTTGACCTTATGAAGATGCGGGAAGAGGTTATCACCCTC AGCTTGACCTTATGAAGATGCGGTAAGAGGTTATCACCCTC < 41bp 0.815177451532513 0.464162358864001 0.887709 0.15833429 prediction 0.630354903065026 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91017818 chr15:91017821 stopgain 0.955 1 24 hm5C_associated_SNPs_52572 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91017777-91017823
64251 chr10 123987437 123987437 1 + G T SKCM 123987434 + 123987414 123987454 41 CACGAGGACTGGCCCCTAACCAAGAGTCACACTTGCAGGTG CACGAGGACTGGCCCCTAACCAATAGTCACACTTGCAGGTG < 41bp 0.847304389475402 0.532155882259247 0.67759836 0.21297216 prediction 0.63029701443231 Functional Loss - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123987434 chr10:123987437 stopgain 0.876 0 24 hm5C_associated_SNPs_52578 0 0 3 GRWD1 POSTAR2 ENCODE chr10:123987357-123987468
64251 chr22 43559013 43559013 1 + G T UCEC 43559010 + 43558990 43559030 41 CAGAGTGAGTGCCCGGCCCACCAGGGACTGCAGCTGCACCA CAGAGTGAGTGCCCGGCCCACCATGGACTGCAGCTGCACCA < 41bp 0.867418516890965 0.552280374042451 0.90354383 0.26633888 prediction 0.630276285697027 Functional Loss - TSPO ENSG00000100300 CDS Human protein_coding chr22:43559010 chr22:43559013 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_52579 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr22:43558988-43559013
64251 chr20 36028539 36028539 1 + G T SARC 36028537 + 36028517 36028557 41 GGGACCTGGAACGGTACCACCAGGGTGGCCATCAAAACCCT GGGACCTGGAACGGTACCACCATGGTGGCCATCAAAACCCT < 41bp 0.815130418383657 0.477533248774533 0.92691076 0.20941946 prediction 0.630260836767314 Functional Loss - SRC ENSG00000197122 CDS Human protein_coding chr20:36028537 chr20:36028539 nonsynonymous SNV 0.927 3 23 hm5C_associated_SNPs_52581 0 0 1 BUD13 POSTAR2 ENCODE chr20:36028463-36028550
64251 chr1 11867208 11867208 1 + G T UCEC 11867206 + 11867186 11867226 41 AGACCATCCTTGGAGAAACACAGGAGGAGGAGGATGAGATT AGACCATCCTTGGAGAAACACATGAGGAGGAGGATGAGATT < 41bp 0.825126171401018 0.510075763118844 0.8980706 0.24134567 prediction 0.630100816564348 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11867206 chr1:11867208 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_52583 0 0 6 BUD13 POSTAR2 ENCODE chr1:11867186-11867245
64251 chr21 37442687 37442687 1 + G T LUAD 37442685 + 37442665 37442705 41 GGACGTGCTGGTCAACAACGCGGGCATCGCCTTCAAGGGTA GGACGTGCTGGTCAACAACGCGTGCATCGCCTTCAAGGGTA < 41bp 0.816668845906377 0.50168786682741 0.8827012 0.36759192 prediction 0.629961958157934 Functional Loss - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37442685 chr21:37442687 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52587 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr21:37442669-37442687
64251 chr19 42399497 42399497 1 + G T STAD 42399494 + 42399474 42399514 41 GGACCGGAATATCGGGGCTCCTGGGCAGGACACCCCTGGAG GGACCGGAATATCGGGGCTCCTGTGCAGGACACCCCTGGAG < 41bp 0.814931688618348 0.454066698776774 0.9265423 0.32070464 prediction 0.629863377236696 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42399494 chr19:42399497 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_52596 0 0 12 RTCB POSTAR2 GSE38201,GSM936508 chr19:42399481-42399501
64251 chr6 117037417 117037417 1 + G T UCEC 117037414 + 117037394 117037434 41 TTCAAACAGACTCACAACAACAAGAAATGCCGTGTGGGCCC TTCAAACAGACTCACAACAACAATAAATGCCGTGTGGGCCC < 41bp 0.814919122128905 0.458648346161546 0.22190061 0.15521058 prediction 0.629838244257809 Functional Loss - KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117037414 chr6:117037417 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52597 0 0 2 U2AF2 POSTAR2 ENCODE chr6:117037367-117037440
64251 chr12 117461965 117461965 1 + G T ESCA 117461962 + 117461942 117461982 41 GCCTGTCCAGGGTGAGGATCCACGACCTCCGCAGTGGTAAC GCCTGTCCAGGGTGAGGATCCACTACCTCCGCAGTGGTAAC < 41bp 0.873035436143087 0.558131350855272 0.62358 0.36487377 prediction 0.62980817057563 Functional Loss - FBXW8 ENSG00000174989 CDS Human protein_coding chr12:117461962 chr12:117461965 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_52599 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:117461965-117461986
64251 chr1 15987584 15987584 1 + G T UCEC 15987581 + 15987561 15987601 41 ACCCAAAATGAGCATCTTACCCAGAATGAACAGTGTCCACA ACCCAAAATGAGCATCTTACCCATAATGAACAGTGTCCACA < 41bp 0.8148962664792 0.481526202230891 0.1964117 0.05994913 prediction 0.6297925329584 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15987581 chr1:15987584 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_52602 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:15987560-15987584
64251 chr1 180775252 180775252 1 + G T LUAD 180775249 + 180775229 180775269 41 TGAAAAAGCATGACAAGATCCTGGAAACATCTCGTGGAGCA TGAAAAAGCATGACAAGATCCTGTAAACATCTCGTGGAGCA < 41bp 0.814884357795717 0.476603706145364 0.37497357 0.077346355 prediction 0.629768715591434 Functional Loss - XPR1 ENSG00000143324 CDS Human protein_coding chr1:180775249 chr1:180775252 stopgain 1.000 1 24 hm5C_associated_SNPs_52604 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:180775241-180775279
64251 chr2 190535346 190535346 1 + G T UCEC 190535343 + 190535323 190535363 41 ACGGGCCATGCAGTTTGGATCAAGAATTGCAAAAATGGAAA ACGGGCCATGCAGTTTGGATCAATAATTGCAAAAATGGAAA < 41bp 0.847623508021365 0.532789239040102 0.3002395 0.08869249 prediction 0.629668537962526 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190535343 chr2:190535346 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52608 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190535328-190535405
64251 chr22 50635953 50635953 1 + G T SARC 50635951 + 50635931 50635971 41 CACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGA CACCTTCAAGAGGGCCATCGCATCGCTCTCCTTCTGGCAGA < 41bp 0.814831358381137 0.493374487976674 0.91577494 0.41610956 prediction 0.629662716762274 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50635951 chr22:50635953 nonsynonymous SNV 0.083 1 23 hm5C_associated_SNPs_52609 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:50635938-50635967
64251 chr2 64683599 64683599 1 + G T STAD 64683596 + 64683576 64683616 41 TTCATTCCAGACCAGCCATTCAGGGTGAGTACCTCGAGTGC TTCATTCCAGACCAGCCATTCAGTGTGAGTACCTCGAGTGC < 41bp 0.866270718828058 0.551459095209505 0.93767416 0.38154963 prediction 0.629623247237106 Functional Loss - LGALSL ENSG00000119862 CDS Human protein_coding chr2:64683596 chr2:64683599 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52611 0 0 2 PRPF8 POSTAR2 ENCODE chr2:64683577-64683650
64251 chr8 120257134 120257134 1 + G T rs114074309 120257131 + 120257111 120257151 41 TGAGGCCACAGTTCCCACCACACGAGGGCTTTTGTATTGTT TGAGGCCACAGTTCCCACCACACTAGGGCTTTTGTATTGTT < 41bp 0.818740391344311 0.503947524658195 0.15979484 0.11797899 prediction 0.629585733372231 Functional Loss - MAL2 ENSG00000253972 ncRNA_exonic Human lincRNA chr8:120257131 chr8:120257134 . . 0 24 hm5C_associated_SNPs_52614 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:120257087-120257142
64251 chr18 13731756 13731756 1 + G T BLCA 13731753 + 13731733 13731773 41 TGTGGGAAAGACACTCCATCCAAGAAGAGAAAACTTGATCC TGTGGGAAAGACACTCCATCCAATAAGAGAAAACTTGATCC < 41bp 0.814789857113976 0.469527752076496 0.15325585 0.0169895 prediction 0.629579714227951 Functional Loss - RNMT ENSG00000101654 CDS Human protein_coding chr18:13731753 chr18:13731756 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_52615 0 0 2 UCHL5 POSTAR2 ENCODE chr18:13731713-13731778
64251 chr11 125781322 125781322 1 + G T THCA 125781319 + 125781299 125781339 41 CTAAGATTCGTGTGTTTGTCCTGGATGAAGCAGATGTGATG CTAAGATTCGTGTGTTTGTCCTGTATGAAGCAGATGTGATG < 41bp 0.81476209383267 0.463154952630573 0.17633525 0.13849542 prediction 0.629524187665339 Functional Loss - DDX25 ENSG00000109832 CDS Human protein_coding chr11:125781319 chr11:125781322 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52620 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125781303-125781328
64251 chr17 43227434 43227434 1 + G T HNSC 43227431 + 43227411 43227451 41 AGGAGCTCATCAAGGAGTACCTGGAACTGGAGAAGTGCCTC AGGAGCTCATCAAGGAGTACCTGTAACTGGAGAAGTGCCTC < 41bp 0.859123736352441 0.544474626214684 0.7342963 0.3341775 prediction 0.629298220275515 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43227431 chr17:43227434 stopgain 1.000 1 24 hm5C_associated_SNPs_52632 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:43227410-43227446
64251 chr21 27130449 27130449 1 + G T UCEC 27130446 + 27130426 27130466 41 GAGAATTATGTAGTCTCAACCAAGAAGATTTTTTTCAGCGG GAGAATTATGTAGTCTCAACCAATAAGATTTTTTTCAGCGG < 41bp 0.814541585409999 0.462469666434129 0.81708956 0.16091925 prediction 0.629083170819999 Functional Loss - GABPA ENSG00000154727 CDS Human protein_coding chr21:27130446 chr21:27130449 stopgain 1.000 1 24 hm5C_associated_SNPs_52646 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:27130440-27130460
64251 chr6 27806817 27806817 1 + G T UCEC 27806814 + 27806794 27806834 41 GTCACCAAGTACACCAGTTCCAAGTGAGCCCGCCCACCGCG GTCACCAAGTACACCAGTTCCAATTGAGCCCGCCCACCGCG < 41bp 0.857785649254205 0.543244718651767 0.77172416 0.25496593 prediction 0.629081861204874 Functional Loss - HIST1H2BN ENSG00000233822;ENSG00000233822 exonic;splicing Human other chr6:27806814 chr6:27806817 nonsynonymous SNV 0.946 0 24 hm5C_associated_SNPs_52647 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806780-27806820
64251 chr10 13246327 13246327 1 + A C LUSC 13246323 + 13246303 13246343 41 TTCAAATGTCCCTGTGGAAACAGAAGCATCTCCTTGGACAG TTCAAATGTCCCTGTGGAAACAGACGCATCTCCTTGGACAG < 41bp 0.814540678019863 0.440136229727855 0.8694531 0.8466493 prediction 0.629081356039725 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13246323 chr10:13246327 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_52648 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:13246305-13246366
64251 chr10 27456177 27456177 1 + A C UCEC 27456173 + 27456153 27456193 41 AGTGTGGAATCAGAATGCCACAGCAGTCCCAAATGGGAAAA AGTGTGGAATCAGAATGCCACAGCCGTCCCAAATGGGAAAA < 41bp 0.814518879359384 0.420496792526034 0.13584769 0.15753058 prediction 0.629037758718768 Functional Loss - MASTL ENSG00000120539 CDS Human protein_coding chr10:27456173 chr10:27456177 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_52651 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:27456147-27456185
64251 chr19 37854259 37854259 1 + G T LUAD 37854256 + 37854236 37854276 41 CACGCACCAGAGGACACACTCAGGGGAGAAGCCATTTGTAT CACGCACCAGAGGACACACTCAGTGGAGAAGCCATTTGTAT < 41bp 0.814436474689662 0.447151307085294 0.946721 0.80360675 prediction 0.628872949379324 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854256 chr19:37854259 nonsynonymous SNV 0.976 3 24 hm5C_associated_SNPs_52654 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37854188-37854295
64251 chr17 37898928 37898928 1 + A C ESCA 37898924 + 37898904 37898944 41 AGCCCAATTCTCGGGGGCCCCTCCAGTGCAAGGGGGCTGCT AGCCCAATTCTCGGGGGCCCCTCCCGTGCAAGGGGGCTGCT < 41bp 0.903554514154597 0.589130106424933 0.9634427 0.916832 prediction 0.628848815459327 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37898924 chr17:37898928 nonsynonymous SNV 0.207 0 25 hm5C_associated_SNPs_52657 0 0 2 DDX59 POSTAR2 ENCODE chr17:37898874-37898930
64251 chr2 12863576 12863576 1 + G T UCEC 12863573 + 12863553 12863593 41 GCTGAGAGAGGAGGAGGCAGCCAGACTGTTCTACCAGATTG GCTGAGAGAGGAGGAGGCAGCCATACTGTTCTACCAGATTG < 41bp 0.81440985879119 0.44627360573336 0.7924942 0.70131314 prediction 0.62881971758238 Functional Loss - TRIB2 ENSG00000071575 CDS Human protein_coding chr2:12863573 chr2:12863576 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_52658 0 0 1 DGCR8 POSTAR2 ENCODE chr2:12863554-12863597
64251 chr2 235951713 235951713 1 + G T SARC 235951711 + 235951691 235951731 41 ACCCTGCTCATGGAGAACATCAGCAGCTGGCGCTCCTTCGC ACCCTGCTCATGGAGAACATCATCAGCTGGCGCTCCTTCGC < 41bp 0.814389244443997 0.499380727445085 0.6631031 0.06806862 prediction 0.628778488887993 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235951711 chr2:235951713 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_52660 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:235951696-235951721
64251 chr1 44684765 44684765 1 + A C UCEC 44684761 + 44684741 44684781 41 AGTACCTGCTACAGGAGCTGCGCAAGATTGAGGCCCGGAAG AGTACCTGCTACAGGAGCTGCGCACGATTGAGGCCCGGAAG < 41bp 0.81438553671226 0.41973964532693 0.8523513 0.3699875 prediction 0.62877107342452 Functional Loss - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684761 chr1:44684765 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_52663 0 0 5 LIN28B POSTAR2 ENCODE chr1:44684741-44684814
64251 chr6 26217405 26217405 1 + G T UCEC 26217402 + 26217382 26217422 41 GGCCGAGATCTTAGAGCTAGCTGGCAACGCGGCTCGCGACA GGCCGAGATCTTAGAGCTAGCTGTCAACGCGGCTCGCGACA < 41bp 0.814359294926492 0.463585106619094 0.45280713 0.21687332 prediction 0.628718589852984 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217402 chr6:26217405 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_52666 0 0 4 DDX24 POSTAR2 ENCODE chr6:26217392-26217431
64251 chr12 112587634 112587634 1 + A C SKCM 112587630 + 112587610 112587650 41 CTAGACTGGATTCCCAGCCTCAAGAGACCTCACCAGAGCTG CTAGACTGGATTCCCAGCCTCAAGCGACCTCACCAGAGCTG < 41bp 0.814358865214649 0.425350893203004 0.39021218 0.20646909 prediction 0.628717730429298 Functional Loss - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112587630 chr12:112587634 nonsynonymous SNV 0.322 0 25 hm5C_associated_SNPs_52667 0 0 2 DDX24 POSTAR2 ENCODE chr12:112587554-112587664
64251 chrX 134989171 134989171 1 + G T UCEC 134989169 + 134989149 134989189 41 CATCTTGTCAACTGCTTCAACAGGGCTTATTAATGTGGCAG CATCTTGTCAACTGCTTCAACATGGCTTATTAATGTGGCAG < 41bp 0.814340119789455 0.492278768486806 0.7715103 0.14584231 prediction 0.62868023957891 Functional Loss - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134989169 chrX:134989171 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_52668 0 0 2 YBX3 POSTAR2 ENCODE chrX:134989158-134989209
64251 chr1 227946881 227946881 1 + G T CESC 227946878 + 227946858 227946898 41 AACAGAGTCTCACGTTAAACCAGGGAGGCTCACCGTCCTTG AACAGAGTCTCACGTTAAACCAGTGAGGCTCACCGTCCTTG < 41bp 0.814340046932866 0.433086893005146 0.9178035 0.24893102 prediction 0.628680093865731 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227946878 chr1:227946881 nonsynonymous SNV 0.025 4 24 hm5C_associated_SNPs_52669 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:227946845-227946883
64251 chr7 139026167 139026167 1 + G T GBM 139026164 + 139026144 139026184 41 GGTCCCCGTCGCACACTTTTCGAGGACTTCTGCGGGAGTTG GGTCCCCGTCGCACACTTTTCGATGACTTCTGCGGGAGTTG < 41bp 0.875002234147731 0.560668325499265 0.91143626 0.3247556 prediction 0.628667817296933 Functional Loss - C7orf55-LUC7L2;FMC1 ENSG00000164898;ENSG00000269955 CDS Human other chr7:139026164 chr7:139026167 stopgain 0.995 1 24 hm5C_associated_SNPs_52670 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:139026080-139026189
64251 chr9 100823218 100823218 1 + G T PRAD 100823216 + 100823196 100823236 41 GAGTTCAGCCATGACCAGTACAGGGAGCTGCAGAGGTACGC GAGTTCAGCCATGACCAGTACATGGAGCTGCAGAGGTACGC < 41bp 0.819006722466756 0.504675632731997 0.5127233 0.28274095 prediction 0.628662179469517 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100823216 chr9:100823218 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_52672 0 0 5 GRWD1 POSTAR2 ENCODE chr9:100823101-100823219
64251 chr12 56524691 56524691 1 + A C LUSC 56524687 + 56524667 56524707 41 TCTGCAAACATTTACATTTACACGAGTGGAACTGGGTGAAA TCTGCAAACATTTACATTTACACGCGTGGAACTGGGTGAAA < 41bp 0.894913029960882 0.580594273759751 0.07281196 0.060825557 prediction 0.628637512402262 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56524687 chr12:56524691 synonymous SNV . 0 25 hm5C_associated_SNPs_52674 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr12:56524676-56524703
64251 chr14 51707023 51707023 1 + G T LUSC 51707021 + 51707001 51707041 41 AAGCGGCGAAATGGCGCCCTCCGGGAGTCTTGCAGTTCCCC AAGCGGCGAAATGGCGCCCTCCTGGAGTCTTGCAGTTCCCC < 41bp 0.817078925333614 0.502776885200431 0.91219777 0.29055864 prediction 0.628604080266367 Functional Loss - TMX1 ENSG00000139921 CDS Human protein_coding chr14:51707021 chr14:51707023 nonsynonymous SNV 0.027 1 23 hm5C_associated_SNPs_52675 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:51707006-51707047
64251 chr20 61299221 61299221 1 + G T CESC 61299219 + 61299199 61299239 41 GTACTTCTCACTGTGCCACGCAGGGTGCCCTGCAGCCACGG GTACTTCTCACTGTGCCACGCATGGTGCCCTGCAGCCACGG < 41bp 0.847315205311771 0.533067641968297 0.9101097 0.546247 prediction 0.628495126686948 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299219 chr20:61299221 nonsynonymous SNV 0.004 4 23 hm5C_associated_SNPs_52682 0 0 3 BUD13 POSTAR2 ENCODE chr20:61299215-61299264
64251 chr14 31346934 31346934 1 + G T COAD 31346932 + 31346912 31346952 41 ATATGTGGGGCTGCTGTCCACAGGTAAGCCCAAACACACCA ATATGTGGGGCTGCTGTCCACATGTAAGCCCAAACACACCA < 41bp 0.814226924330023 0.489810960583097 0.8404379 0.24147356 prediction 0.628453848660045 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31346932 chr14:31346934 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_52685 0 0 3 DDX3X POSTAR2 ENCODE chr14:31346884-31346935
64251 chr4 39439400 39439400 1 + G T LUAD 39439397 + 39439377 39439417 41 GTTATACTGCCTGGTCTCTCCTGGATGGCTTTGAATGGCAG GTTATACTGCCTGGTCTCTCCTGTATGGCTTTGAATGGCAG < 41bp 0.814224041308101 0.45489055562139 0.4268809 0.13727364 prediction 0.628448082616202 Functional Loss - KLB ENSG00000134962 CDS Human protein_coding chr4:39439397 chr4:39439400 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52686 0 0 1 LIN28B POSTAR2 ENCODE chr4:39439374-39439444
64251 chr5 434632 434632 1 + G T LUAD 434629 + 434609 434649 41 CGCACCTGGGGCACGGCGTGCGGGGGGCTCAGCCCCATGGG CGCACCTGGGGCACGGCGTGCGGTGGGCTCAGCCCCATGGG < 41bp 0.88384927251511 0.569632770260617 0.932089 0.81038916 prediction 0.628433004508985 Functional Loss - AHRR ENSG00000063438 CDS Human protein_coding chr5:434629 chr5:434632 nonsynonymous SNV 0.005 3 24 hm5C_associated_SNPs_52687 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:434562-434646
64251 chr16 15490051 15490051 1 + G T UCEC 15490048 + 15490028 15490068 41 GTCGGTGCGCCCATCGCGGTCTCGGCCTTCTATGTCGGTGA GTCGGTGCGCCCATCGCGGTCTCTGCCTTCTATGTCGGTGA < 41bp 0.814201875774379 0.443767094493007 0.15961328 0.0893307 prediction 0.628403751548757 Functional Loss - MPV17L ENSG00000156968;ENSG00000261130 CDS Human other chr16:15490048 chr16:15490051 synonymous SNV . 0 24 hm5C_associated_SNPs_52689 0 0 2 PRPF8 POSTAR2 ENCODE chr16:15490036-15490106
64251 chr8 144103160 144103160 1 + G T LUAD 144103157 + 144103137 144103177 41 AAGCGTCACCCTGCTGGGTGCCGGGCTGCTGCTGAGCCTGC AAGCGTCACCCTGCTGGGTGCCGTGCTGCTGCTGAGCCTGC < 41bp 0.814197032709624 0.450030252968061 0.70285463 0.1059348 prediction 0.628394065419248 Functional Loss - LY6E ENSG00000160932 CDS Human protein_coding chr8:144103157 chr8:144103160 nonsynonymous SNV 0.266 3 24 hm5C_associated_SNPs_52690 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:144103154-144103194
64251 chr2 74056105 74056105 1 + G T rs77194291 74056102 + 74056082 74056122 41 TGTGACGTTTCCGGAACCTCCGGGTGTCATCCGCGGGGAAA TGTGACGTTTCCGGAACCTCCGGTTGTCATCCGCGGGGAAA < 41bp 0.854831461459313 0.540642514370713 0.919283 0.84584177 prediction 0.628377894177199 Functional Loss - STAMBP ENSG00000124356 UTR5 Human protein_coding chr2:74056102 chr2:74056105 . . 0 24 hm5C_associated_SNPs_52691 0 0 3 DDX3X POSTAR2 ENCODE chr2:74056090-74056125
64251 chr19 46205121 46205121 1 + G T THYM 46205119 + 46205099 46205139 41 GGAAGTGATGTACTTCCAACCCGGGGAGCCCTTTGGCTCTG GGAAGTGATGTACTTCCAACCCTGGGAGCCCTTTGGCTCTG < 41bp 0.832689780346069 0.518507214240204 0.93156 0.2239829 prediction 0.62836513221173 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46205119 chr19:46205121 nonsynonymous SNV 0.904 3 23 hm5C_associated_SNPs_52692 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:46205087-46205121
64251 chr6 25972186 25972186 1 + G T LUSC 25972183 + 25972163 25972203 41 GAGGAAGAGAAGTCTTATCTCTGGAGGCTGGAGAAAGAAGA GAGGAAGAGAAGTCTTATCTCTGTAGGCTGGAGAAAGAAGA < 41bp 0.820728284164797 0.506564629281264 0.063981354 0.042170435 prediction 0.628327309767068 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25972183 chr6:25972186 nonsynonymous SNV 0.481 4 24 hm5C_associated_SNPs_52696 0 0 2 RBM15 POSTAR2 ENCODE chr6:25972159-25972272
64251 chr4 187197050 187197050 1 + G T PRAD 187197047 + 187197027 187197067 41 AATCCTGTGCACTTTCTAATCTGGGTAATTATCGACTTCTT AATCCTGTGCACTTTCTAATCTGTGTAATTATCGACTTCTT < 41bp 0.814106727744424 0.464457456052677 0.33668458 0.047601104 prediction 0.628213455488848 Functional Loss - F11 ENSG00000088926 CDS Human protein_coding chr4:187197047 chr4:187197050 nonsynonymous SNV 0.827 3 24 hm5C_associated_SNPs_52699 0 0 1 PRPF8 POSTAR2 ENCODE chr4:187197030-187197087
64251 chr7 98951688 98951688 1 + G T BLCA 98951686 + 98951666 98951706 41 TCTCTGCCAGTGGGAGCCGCCTGGCCTGGGTCAGCCACGAC TCTCTGCCAGTGGGAGCCGCCTTGCCTGGGTCAGCCACGAC < 41bp 0.814063934119909 0.496733138843998 0.24483216 0.11671314 prediction 0.628127868239818 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98951686 chr7:98951688 synonymous SNV . 0 23 hm5C_associated_SNPs_52704 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:98951675-98951732
64251 chr15 60297656 60297656 1 + G T rs185361903 60297653 + 60297633 60297673 41 GGGCGGCGTGGCGCAGCCCTCGGGCTTCAAGCACCCCTTCG GGGCGGCGTGGCGCAGCCCTCGGTCTTCAAGCACCCCTTCG < 41bp 0.878947279007775 0.564903191174569 0.9388559 0.27367455 prediction 0.628088175666411 Functional Loss - FOXB1 ENSG00000171956 CDS Human protein_coding chr15:60297653 chr15:60297656 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_52707 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:60297640-60297663
64251 chr19 56658417 56658417 1 + G T HNSC 56658415 + 56658395 56658435 41 GGGCTGCTCCGCGCCCTGTGCCGGGACTGGCTGCGGCCCGA GGGCTGCTCCGCGCCCTGTGCCTGGACTGGCTGCGGCCCGA < 41bp 0.83849301210301 0.524510295700422 0.8941362 0.16337726 prediction 0.627965432805176 Functional Loss - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56658415 chr19:56658417 nonsynonymous SNV 0.937 2 23 hm5C_associated_SNPs_52715 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:56658400-56658420
64251 chr12 58176927 58176927 1 + G T UCEC 58176924 + 58176904 58176944 41 TCTGCGTCAGTCGCCCCAGCCAAGGCACACATTTTATGCTG TCTGCGTCAGTCGCCCCAGCCAATGCACACATTTTATGCTG < 41bp 0.859952196500561 0.545992205703633 0.3353048 0.15070206 prediction 0.627919981593855 Functional Loss - TSFM ENSG00000123297;ENSG00000257921 CDS Human other chr12:58176924 chr12:58176927 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_52716 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:58176907-58176927
64251 chr19 4496311 4496311 1 + G T SARC 4496309 + 4496289 4496329 41 ACTGCTATAGGCCAAGAAATCAGCGAAGAAGCCGCAGTCCT ACTGCTATAGGCCAAGAAATCATCGAAGAAGCCGCAGTCCT < 41bp 0.813897867842512 0.489128813350986 0.8761658 0.6865657 prediction 0.627795735685024 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4496309 chr19:4496311 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_52724 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:4496305-4496330
64251 chr19 3381733 3381733 1 + G T LUAD 3381730 + 3381710 3381750 41 GATGAGTTCCACCCGTTCATCGAGGCCCTGCTGCCTCACGT GATGAGTTCCACCCGTTCATCGATGCCCTGCTGCCTCACGT < 41bp 0.813894792372689 0.439509035413392 0.9242172 0.38747156 prediction 0.627789584745378 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381730 chr19:3381733 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_52726 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:3381720-3381740
64251 chr12 121434574 121434574 1 + G T SARC 121434572 + 121434552 121434592 41 TGGTGGGGATGGGTGGGCACCTGGGTGGGAGGCTCATGGGG TGGTGGGGATGGGTGGGCACCTTGGTGGGAGGCTCATGGGG < 41bp 0.813855291324577 0.498804047840235 0.8661057 0.7375632 prediction 0.627710582649154 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121434572 chr12:121434574 synonymous SNV . 0 23 hm5C_associated_SNPs_52727 0 0 3 EFTUD2 POSTAR2 ENCODE chr12:121434566-121434625
64251 chr6 143792193 143792193 1 + G T STAD 143792190 + 143792170 143792210 41 TAATTGGTGGATATATTTACCTGGATAATGCAGCAGTTGGC TAATTGGTGGATATATTTACCTGTATAATGCAGCAGTTGGC < 41bp 0.849115427397624 0.535276383379635 0.24592808 0.15201184 prediction 0.627678088035978 Functional Loss - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143792190 chr6:143792193 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52729 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:143792183-143792205
64251 chr12 81472130 81472130 1 + G T ESCA 81472127 + 81472107 81472147 41 GTGACCGACCCCGAGAGGTTCTGGGGCAAAGCTGCCGAGCA GTGACCGACCCCGAGAGGTTCTGTGGCAAAGCTGCCGAGCA < 41bp 0.872713802728964 0.558905382502805 0.8594282 0.28713953 prediction 0.627616840452318 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81472127 chr12:81472130 nonsynonymous SNV 0.967 4 24 hm5C_associated_SNPs_52730 0 0 1 RPS3 POSTAR2 ENCODE chr12:81472080-81472143
64251 chr20 30380605 30380605 1 + G T UCEC 30380603 + 30380583 30380623 41 CCAGCCTTTGCATTGAAGAACAGAATTCGAATGCCCACCAA CCAGCCTTTGCATTGAAGAACATAATTCGAATGCCCACCAA < 41bp 0.817556940670738 0.503758132644296 0.20091105 0.10734841 prediction 0.627597616052882 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30380603 chr20:30380605 nonsynonymous SNV 0.977 4 23 hm5C_associated_SNPs_52733 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:30380597-30380625
64251 chr11 237093 237093 1 + G T LUAD 237091 + 237071 237111 41 CTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGCTGT CTACAGCAGAGCCAGAACTCCGTGCCCGGGCAGCCCGCTGT < 41bp 0.82676460421599 0.512967999852776 0.92937475 0.9074836 prediction 0.627593208726427 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:237091 chr11:237093 nonsynonymous SNV 0.930 1 23 hm5C_associated_SNPs_52734 0 0 8 DDX3X POSTAR2 ENCODE chr11:237063-237106
64251 chr1 158058193 158058193 1 + G T ACC 158058190 + 158058170 158058210 41 GATGTGACCCTTACCTGTGTCTGGGTTGGGAATCCCCCCCT GATGTGACCCTTACCTGTGTCTGTGTTGGGAATCCCCCCCT < 41bp 0.881443214304209 0.567747066070877 0.8338237 0.20602083 prediction 0.627392296466664 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158058190 chr1:158058193 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52740 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:158058183-158058203
64251 chr14 50088247 50088247 1 + G T rs2228449 50088245 + 50088225 50088265 41 CCCAGCCCGAGGCGGACAACCTGACGCTGCGGTACCGGTCC CCCAGCCCGAGGCGGACAACCTTACGCTGCGGTACCGGTCC < 41bp 0.815800939088151 0.502121730876837 0.29437923 0.1789054 prediction 0.627358416422628 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088245 chr14:50088247 synonymous SNV . 0 23 hm5C_associated_SNPs_52744 3 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:50088212-50088304
64251 chr15 75183755 75183755 1 + G T UCEC 75183752 + 75183732 75183772 41 ACTCACCCCCGAGGGGATGCCAAGATCCTTGACAACCGCAT ACTCACCCCCGAGGGGATGCCAATATCCTTGACAACCGCAT < 41bp 0.869041309194055 0.555373860433873 0.44439736 0.24286774 prediction 0.627334897520365 Functional Loss - MPI ENSG00000178802;ENSG00000178802 exonic;splicing Human other chr15:75183752 chr15:75183755 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52745 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:75183720-75183758
64251 chr12 121647986 121647986 1 + G T ESCA 121647984 + 121647964 121648004 41 GGCCATGGCGGGCTGCTGCGCCGCGCTGGCGGCCTTCCTGT GGCCATGGCGGGCTGCTGCGCCTCGCTGGCGGCCTTCCTGT < 41bp 0.824642341329324 0.51097655439638 0.37060687 0.12211844 prediction 0.62733157386589 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121647984 chr12:121647986 nonsynonymous SNV 0.009 0 23 hm5C_associated_SNPs_52746 0 0 6 DDX3X POSTAR2 ENCODE chr12:121647947-121647997
64251 chr12 110467387 110467387 1 + G T UCEC 110467384 + 110467364 110467404 41 TCGAACGAGTGCTCATTTTGCAAGACTGAGAGATTTCATCA TCGAACGAGTGCTCATTTTGCAATACTGAGAGATTTCATCA < 41bp 0.813634466974374 0.458633146013137 0.5497055 0.3796587 prediction 0.627268933948748 Functional Loss - ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110467384 chr12:110467387 nonsynonymous SNV 0.972 4 24 hm5C_associated_SNPs_52751 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:110467358-110467391
64251 chr11 61736060 61736060 1 + G T rs558728583 61736057 + 61736037 61736077 41 GAAGCTGACGGGGTTAATGGCGGGTGACAGGTGAAAGAGAC GAAGCTGACGGGGTTAATGGCGGTTGACAGGTGAAAGAGAC < 41bp 0.813628501403848 0.455216551087237 0.9190713 0.9048692 prediction 0.627257002807697 Functional Loss - FTH1 ENSG00000269089 CDS Human other chr11:61736057 chr11:61736060 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_52753 0 0 1 SLTM POSTAR2 ENCODE chr11:61736051-61736105
64251 chr16 67063330 67063330 1 + A C STAD 67063326 + 67063306 67063346 41 GGAAGATGCCGCGCGTCGTGCCCGACCAGAGAAGCAAGTTC GGAAGATGCCGCGCGTCGTGCCCGCCCAGAGAAGCAAGTTC < 41bp 0.81362297986885 0.454899927060507 0.21336845 0.14256951 prediction 0.6272459597377 Functional Loss - CBFB ENSG00000067955 CDS Human protein_coding chr16:67063326 chr16:67063330 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_52754 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67063307-67063332
64251 chr19 58101737 58101737 1 + G T LUAD 58101735 + 58101715 58101755 41 TGTTGCGGCTTCTGAGGTCCCTGGTCTTTCCTGGAGGCAAG TGTTGCGGCTTCTGAGGTCCCTTGTCTTTCCTGGAGGCAAG < 41bp 0.819401587654758 0.505819622670936 0.75514805 0.553699 prediction 0.627163929967644 Functional Loss - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101735 chr19:58101737 synonymous SNV . 0 23 hm5C_associated_SNPs_52756 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:58101724-58101738
64251 chr17 41180096 41180096 1 + G T COAD 41180093 + 41180073 41180113 41 CATAGTGGCAAGGAGAGACTCAAGAGTTCTGCCCCAATGCC CATAGTGGCAAGGAGAGACTCAATAGTTCTGCCCCAATGCC < 41bp 0.88031969335539 0.566741874997002 0.6949622 0.2920212 prediction 0.627155636716777 Functional Loss - RND2 ENSG00000108830 CDS Human protein_coding chr17:41180093 chr17:41180096 stopgain 1.000 1 24 hm5C_associated_SNPs_52757 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr17:41180094-41180138
64251 chr15 43690301 43690301 1 + G T LUSC 43690299 + 43690279 43690319 41 TCCCCGGGAAGCCCCTGCATCTGGCTGGGCAGCCCTAGGTC TCCCCGGGAAGCCCCTGCATCTTGCTGGGCAGCCCTAGGTC < 41bp 0.820633542851538 0.5071041896241 0.28508958 0.07668531 prediction 0.627058706454876 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43690299 chr15:43690301 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_52759 0 0 4 U2AF1 POSTAR2 ENCODE chr15:43690232-43690325
64251 chr10 23399200 23399200 1 + G T LUAD 23399197 + 23399177 23399217 41 AGTGGGATCTACCTGAATAACAAGGAAGCAGGAATGTATCA AGTGGGATCTACCTGAATAACAATGAAGCAGGAATGTATCA < 41bp 0.813522983021594 0.445674888362908 0.5626245 0.07886279 prediction 0.627045966043187 Functional Loss - MSRB2 ENSG00000148450 CDS Human protein_coding chr10:23399197 chr10:23399200 nonsynonymous SNV 0.800 1 24 hm5C_associated_SNPs_52760 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:23399198-23399247
64251 chr12 113871969 113871969 1 + G T UCEC 113871966 + 113871946 113871986 41 ACGAGGCCAATCTGAGGGCGCAAGAGTTGGCCAAGAGGGAC ACGAGGCCAATCTGAGGGCGCAATAGTTGGCCAAGAGGGAC < 41bp 0.876689037978929 0.56324219493692 0.8948666 0.7449511 prediction 0.626893686084019 Functional Loss - SDSL ENSG00000139410 CDS Human protein_coding chr12:113871966 chr12:113871969 stopgain 0.512 0 24 hm5C_associated_SNPs_52767 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:113871969-113871970
64251 chr7 98256508 98256508 1 + G T LIHC 98256506 + 98256486 98256526 41 CTGCCCCTGTTTGTCAGTGACGGCAAGTGGCACCACATCTG CTGCCCCTGTTTGTCAGTGACGTCAAGTGGCACCACATCTG < 41bp 0.82738392324546 0.513951873524263 0.35050443 0.16462126 prediction 0.626864099442393 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98256506 chr7:98256508 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_52768 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98256504-98256536
64251 chr7 150094613 150094613 1 + G T PAAD 150094610 + 150094590 150094630 41 CACTGTGGCCGCGGCTTCCGCCAGAAGCAGCACCTGCTCAA CACTGTGGCCGCGGCTTCCGCCATAAGCAGCACCTGCTCAA < 41bp 0.86846054637894 0.555041216461715 0.8915205 0.4459703 prediction 0.626838659834449 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150094610 chr7:150094613 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52772 0 0 1 FXR2 POSTAR2 ENCODE chr7:150094532-150094621
64251 chr22 30823252 30823252 1 + G T SARC 30823249 + 30823229 30823269 41 TCTAGCCTCTGTGGCCATTCCGGGCTTCACCATCAACCGCG TCTAGCCTCTGTGGCCATTCCGGTCTTCACCATCAACCGCG < 41bp 0.813410100110822 0.440828063007954 0.9311988 0.8678085 prediction 0.626820200221643 Functional Loss - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30823249 chr22:30823252 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_52773 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:30823218-30823264
64251 chr2 132021792 132021792 1 + G T UCEC 132021789 + 132021769 132021809 41 AGAAGCTGTGCTATGTTGCCCTGGACTTCGAGCAGGAGATG AGAAGCTGTGCTATGTTGCCCTGTACTTCGAGCAGGAGATG < 41bp 0.813370596242567 0.46332823728357 0.08798796 0.07056022 prediction 0.626741192485134 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021789 chr2:132021792 nonsynonymous SNV 0.139 3 24 hm5C_associated_SNPs_52774 0 0 6 EIF3H POSTAR2 ENCODE chr2:132021758-132021837
64251 chrX 47044965 47044965 1 + G T ESCA 47044963 + 47044943 47044983 41 CAGAAGCTGGCCTGTCTGCTCTGCCGACGCCAGTTCCCCAG CAGAAGCTGGCCTGTCTGCTCTTCCGACGCCAGTTCCCCAG < 41bp 0.81333844991383 0.496600295580428 0.3915467 0.22491726 prediction 0.62667689982766 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47044963 chrX:47044965 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_52776 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47044945-47044981
64251 chr17 48745134 48745134 1 + G T STAD 48745132 + 48745112 48745152 41 CTTCCTGGTGAGGCTTGGCACAGGGCTGGGTCCCTGCCTCC CTTCCTGGTGAGGCTTGGCACATGGCTGGGTCCCTGCCTCC < 41bp 0.843710325498785 0.530459563279094 0.931139 0.83528745 prediction 0.626501524439382 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745132 chr17:48745134 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_52783 0 0 1 PRPF8 POSTAR2 ENCODE chr17:48745092-48745159
64251 chrX 84502625 84502625 1 + G T HNSC 84502622 + 84502602 84502642 41 TGGATTGCACACGCCAGACTCTAGAATGGCCCATACCATGA TGGATTGCACACGCCAGACTCTATAATGGCCCATACCATGA < 41bp 0.851911939518644 0.538662453259166 0.28860062 0.33330262 prediction 0.626498972518956 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84502622 chrX:84502625 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52784 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:84502540-84502640
64251 chr16 88039714 88039714 1 + G T LUAD 88039712 + 88039692 88039732 41 TTAGCGCTGTGCCTGGGCGTCGGCAGAACACCATTGTGGTG TTAGCGCTGTGCCTGGGCGTCGTCAGAACACCATTGTGGTG < 41bp 0.8132262712546 0.493186793751024 0.87073624 0.32371962 prediction 0.6264525425092 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88039712 chr16:88039714 synonymous SNV . 0 23 hm5C_associated_SNPs_52786 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:88039693-88039716
64251 chr7 142962282 142962282 1 + G T UCEC 142962280 + 142962260 142962300 41 GGTCATGATCCTGCCCCCGCCCGGGGGATCTACTGTCCTCC GGTCATGATCCTGCCCCCGCCCTGGGGATCTACTGTCCTCC < 41bp 0.813197717542602 0.485329002382332 0.9404298 0.13355106 prediction 0.626395435085205 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962280 chr7:142962282 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_52790 0 0 8 BUD13 POSTAR2 ENCODE chr7:142962265-142962287
64251 chr18 51888188 51888188 1 + G T UCEC 51888185 + 51888165 51888205 41 CACCGAACGAGCAAGAAAAACAAGAAATGCCGTGGAAGACT CACCGAACGAGCAAGAAAAACAATAAATGCCGTGGAAGACT < 41bp 0.813179734653599 0.470476451473872 0.904467 0.9068351 prediction 0.626359469307199 Functional Loss - C18orf54 ENSG00000166845 CDS Human protein_coding chr18:51888185 chr18:51888188 nonsynonymous SNV 0.390 1 24 hm5C_associated_SNPs_52793 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:51888186-51888216
64251 chrX 1531871 1531871 1 + A C rs753250045 1531867 + 1531847 1531887 41 AGAGAAGAGAGGGGTGTGGGCGGGAATGGGTCTTCCTGAAG AGAGAAGAGAGGGGTGTGGGCGGGCATGGGTCTTCCTGAAG < 41bp 0.857903701264808 0.544728090773401 0.9060981 0.8905053 prediction 0.626351220982814 Functional Loss - ASMTL-AS1 ENSG00000236017 ncRNA_exonic Human antisense chrX:1531867 chrX:1531871 . . 0 25 hm5C_associated_SNPs_52795 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chrX:1531860-1531880
64251 chr2 190531026 190531026 1 + G T CESC 190531023 + 190531003 190531043 41 TTTTCTGCTCACGTCCTACACTTGAGGGGTGTTTTGACTAC TTTTCTGCTCACGTCCTACACTTTAGGGGTGTTTTGACTAC < 41bp 0.858693412964965 0.545540652535098 0.07515353 0.034983307 prediction 0.626305520859734 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531023 chr2:190531026 nonsynonymous SNV 0.741 2 24 hm5C_associated_SNPs_52796 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190530955-190531033
64251 chr17 48539874 48539874 1 + G T PAAD 48539872 + 48539852 48539892 41 TGGCGGCTGGCAGCACACGGCAGCATCTGGACCAGCTCCAA TGGCGGCTGGCAGCACACGGCATCATCTGGACCAGCTCCAA < 41bp 0.832807377621461 0.519691809439235 0.18527395 0.043175697 prediction 0.626231136364452 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48539872 chr17:48539874 nonsynonymous SNV 0.524 2 23 hm5C_associated_SNPs_52797 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48539798-48539888
64251 chr5 131705526 131705526 1 + G T rs13180169 131705523 + 131705503 131705543 41 GACCAAGGCGGCGGTGTCAGCTCGCGAGCCTACCCTCCGCG GACCAAGGCGGCGGTGTCAGCTCTCGAGCCTACCCTCCGCG < 41bp 0.829168642262555 0.516082413032628 0.33633563 0.16149434 prediction 0.626172458459854 Functional Loss - MIR3936HG ENSG00000233006 ncRNA_intronic Human processed_transcript chr5:131705523 chr5:131705526 . . 0 24 hm5C_associated_SNPs_52799 1 0 3 DDX3X POSTAR2 ENCODE chr5:131705510-131705605
64251 chr19 30934506 30934506 1 + G T LUAD 30934504 + 30934484 30934524 41 CCTGTGCCTTGGAGTGTCTTCGGCGGAGCCGGAAGCTGAGC CCTGTGCCTTGGAGTGTCTTCGTCGGAGCCGGAAGCTGAGC < 41bp 0.813078353112919 0.493924541969651 0.9131497 0.5053367 prediction 0.626156706225838 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30934504 chr19:30934506 nonsynonymous SNV 0.506 1 23 hm5C_associated_SNPs_52800 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:30934505-30934506
64251 chrX 54836184 54836184 1 + G T BRCA 54836181 + 54836161 54836201 41 GCTTCAGAAAAGGACAGTAGCTCGATGATGCAGACTCTGTT GCTTCAGAAAAGGACAGTAGCTCTATGATGCAGACTCTGTT < 41bp 0.868937251139873 0.55592429095041 0.3308182 0.9358069 prediction 0.626025920378927 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836181 chrX:54836184 synonymous SNV . 0 24 hm5C_associated_SNPs_52810 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54836165-54836186
64251 chr17 7579312 7579312 1 - C A ACC 7579315 - 7579295 7579335 41 ACAGCCAAGTCTGTGACTTGCACGGTCAGTTGCCCTGAGGG ACAGCCAAGTCTGTGACTTGCACTGTCAGTTGCCCTGAGGG < 41bp 0.81299058755366 0.479378092719021 0.29939675 0.07642937 prediction 0.625981175107319 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7579315 chr17:7579312 synonymous SNV . 0 24 hm5C_associated_SNPs_52813 1 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:7579300-7579320
64251 chr2 27016114 27016114 1 + G T LUAD 27016112 + 27016092 27016132 41 CAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTGAG CAAAGGATGTGCAACTGGCCCGTAGGATCCGGGGCCTTGAG < 41bp 0.812980260828918 0.494438244858288 0.8609494 0.30495822 prediction 0.625960521657836 Functional Loss - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016112 chr2:27016114 synonymous SNV . 0 23 hm5C_associated_SNPs_52814 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:27016094-27016116
64251 chr7 134613549 134613549 1 + G T LUSC 134613547 + 134613527 134613567 41 GATGATGAAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGC GATGATGAAGAGGAGGCAGCCCTGGAACGGCGCCGCCGAGC < 41bp 0.812978528258887 0.499449640483458 0.891122 0.12076831 prediction 0.625957056517773 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134613547 chr7:134613549 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_52815 0 0 6 AGGF1 POSTAR2 ENCODE chr7:134613549-134613651
64251 chr15 89169554 89169554 1 + G T SARC 89169552 + 89169532 89169572 41 AGAGAAGGAGCCGACAGCACCAGCGGTTCATGGCCCGGAAG AGAGAAGGAGCCGACAGCACCATCGGTTCATGGCCCGGAAG < 41bp 0.834009207491842 0.521034993917231 0.8872411 0.14418882 prediction 0.625948427149221 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169552 chr15:89169554 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_52816 0 0 2 RPS3 POSTAR2 ENCODE chr15:89169550-89169627
64251 chr5 61602038 61602038 1 + A C rs181824384 61602034 + 61602014 61602054 41 GGGCGGTGCGGGCCCTCCCACTCTACCCCGCGCCGTCTCAC GGGCGGTGCGGGCCCTCCCACTCTCCCCCGCGCCGTCTCAC < 41bp 0.828377723483653 0.515407212035728 0.65666044 0.3119648 prediction 0.62594102289585 Functional Loss - KIF2A ENSG00000068796 UTR5 Human protein_coding chr5:61602034 chr5:61602038 . . 0 25 hm5C_associated_SNPs_52818 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:61602020-61602040
64251 chr2 178257707 178257707 1 + G T SARC 178257705 + 178257685 178257725 41 TGAGTGCAAAGCGCGGAGAGCCGCGTCGGCGGCCACGGCAG TGAGTGCAAAGCGCGGAGAGCCTCGTCGGCGGCCACGGCAG < 41bp 0.812918098141329 0.494238198127555 0.16211513 0.06132108 prediction 0.625836196282658 Functional Loss - AGPS ENSG00000018510 CDS Human protein_coding chr2:178257705 chr2:178257707 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_52822 0 0 8 FASTKD2 POSTAR2 ENCODE chr2:178257698-178257750
64251 chr12 68051350 68051350 1 + G T LUSC 68051347 + 68051327 68051367 41 CCCCACGATCACGTGGCTTACAGGTATGAGGTCCTCAAGGT CCCCACGATCACGTGGCTTACAGTTATGAGGTCCTCAAGGT < 41bp 0.812915046449187 0.445339339930578 0.54080164 0.14268264 prediction 0.625830092898374 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051347 chr12:68051350 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52823 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:68051340-68051360
64251 chr15 68434639 68434639 1 + G T LUSC 68434636 + 68434616 68434656 41 TGTCTCTTCTAGGGATATTTCTGGGACCAAATGTGACTTCA TGTCTCTTCTAGGGATATTTCTGTGACCAAATGTGACTTCA < 41bp 0.812913679775145 0.45498411161609 0.92164165 0.69067013 prediction 0.62582735955029 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68434636 chr15:68434639 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52825 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr15:68434620-68434640
64251 chr19 57132791 57132791 1 + G T HNSC 57132788 + 57132768 57132808 41 TGTGGGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGAGAT TGTGGGAACCAGGCAGCTGGCCATAGAGGCCGCGGGGAGAT < 41bp 0.870150692235124 0.557251571537156 0.6371101 0.49793157 prediction 0.625798241395935 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57132788 chr19:57132791 stopgain 0.003 0 24 hm5C_associated_SNPs_52827 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:57132790-57132791
64251 chr18 9815192 9815192 1 + G T READ 9815189 + 9815169 9815209 41 AAACATTGTAATGGCCATCGCTGGAAACAAGTGCGACCTCT AAACATTGTAATGGCCATCGCTGTAAACAAGTGCGACCTCT < 41bp 0.812876902799022 0.453095070571919 0.238799 0.08899835 prediction 0.625753805598044 Functional Loss - RAB31 ENSG00000168461 CDS Human protein_coding chr18:9815189 chr18:9815192 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52830 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:9815176-9815199
64251 chr3 33187085 33187085 1 + A C rs74503694 33187081 + 33187061 33187101 41 AGCGAGTGGACGCCCTGCTCCGGGATTCCTGAGTCTGTAAA AGCGAGTGGACGCCCTGCTCCGGGCTTCCTGAGTCTGTAAA < 41bp 0.823181842829866 0.510314993073694 0.90839326 0.90991104 prediction 0.625733699512342 Functional Loss - CRTAP ENSG00000272149 ncRNA_intronic Human antisense chr3:33187081 chr3:33187085 . . 0 25 hm5C_associated_SNPs_52832 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:33187085-33187135
64251 chr13 100020106 100020106 1 + G T LUSC 100020104 + 100020084 100020124 41 AGCGACAAAACGTAAACTATCAGGGCGGTCGGCAGTCTGAG AGCGACAAAACGTAAACTATCATGGCGGTCGGCAGTCTGAG < 41bp 0.826432126024143 0.513591507744766 0.94808674 0.91236836 prediction 0.625681236558754 Functional Loss - UBAC2 ENSG00000134882 CDS Human protein_coding chr13:100020104 chr13:100020106 nonsynonymous SNV 0.836 0 23 hm5C_associated_SNPs_52833 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:100020085-100020129
64251 chr15 76632705 76632705 1 + G T UCEC 76632702 + 76632682 76632722 41 CGCGTGCGGACTGTGCTGAACGAGAAGCAGCTGCACACTCT CGCGTGCGGACTGTGCTGAACGATAAGCAGCTGCACACTCT < 41bp 0.878380166024086 0.565579159265553 0.6991242 0.41127902 prediction 0.625602013517066 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76632702 chr15:76632705 stopgain 1.000 5 24 hm5C_associated_SNPs_52837 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76632689-76632731
64251 chr17 21207849 21207849 1 + G T LUSC 21207847 + 21207827 21207867 41 GCCAAGACGATGGATGCCGGCTGCAAGCCCTACATGGCCGT GCCAAGACGATGGATGCCGGCTTCAAGCCCTACATGGCCGT < 41bp 0.812717985393112 0.48938051308857 0.16859165 0.070399255 prediction 0.625435970786223 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21207847 chr17:21207849 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52841 0 0 4 GRWD1 POSTAR2 ENCODE chr17:21207797-21207866
64251 chr17 34144726 34144726 1 + G T SKCM 34144723 + 34144703 34144743 41 CTTTTTATGTGTTCTAGATTCTGGAAGTTACGGTCAGTCTG CTTTTTATGTGTTCTAGATTCTGTAAGTTACGGTCAGTCTG < 41bp 0.853613921767503 0.540913749343464 0.24440852 0.086253405 prediction 0.625400344848078 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34144723 chr17:34144726 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52844 0 0 26 U2AF2 POSTAR2 GSE83923,CSM2221659 chr17:34144700-34144740
64251 chr9 104075196 104075196 1 + G T SKCM 104075194 + 104075174 104075214 41 TCAACCGGGTCTCTGAGTATCGGAACCACTGCTCGGACGTG TCAACCGGGTCTCTGAGTATCGTAACCACTGCTCGGACGTG < 41bp 0.812696901404191 0.488924550131477 0.9248472 0.3733284 prediction 0.625393802808382 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104075194 chr9:104075196 synonymous SNV . 0 23 hm5C_associated_SNPs_52845 0 0 1 PRPF8 POSTAR2 ENCODE chr9:104075196-104075274
64251 chr9 132566477 132566477 1 + G T LUAD 132566474 + 132566454 132566494 41 AACCACTGACCCTTTCCTTACACGGCTGGGCTGGCACAGGC AACCACTGACCCTTTCCTTACACTGCTGGGCTGGCACAGGC < 41bp 0.81267976116757 0.445210126207555 0.0912365 0.06612986 prediction 0.625359522335139 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132566474 chr9:132566477 nonsynonymous SNV 0.972 5 24 hm5C_associated_SNPs_52848 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:132566460-132566480
64251 chr14 21961148 21961148 1 + A C UCEC 21961144 + 21961124 21961164 41 AGATGCCACAGCCCCCGACTCAGCAGCAAGTTACCATTCTG AGATGCCACAGCCCCCGACTCAGCCGCAAGTTACCATTCTG < 41bp 0.891471724365836 0.578801421651543 0.23271969 0.098097086 prediction 0.625340605428585 Functional Loss - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961144 chr14:21961148 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_52849 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:21961115-21961151
64251 chr1 100964796 100964796 1 + G T UCEC 100964793 + 100964773 100964813 41 CGGGCTTTCTTCTTCTTCAGCGAGATTCCTGAGCCGTTCTA CGGGCTTTCTTCTTCTTCAGCGATATTCCTGAGCCGTTCTA < 41bp 0.812668959281833 0.457599667369315 0.75474244 0.22226822 prediction 0.625337918563667 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964793 chr1:100964796 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_52850 0 0 3 PRPF8 POSTAR2 ENCODE chr1:100964796-100964860
64251 chr1 32936709 32936709 1 + A C UCEC 32936705 + 32936685 32936725 41 CATCAGGTTGACAGTGAAAGCCCCAGTTCAGGCCGGGAGGG CATCAGGTTGACAGTGAAAGCCCCCGTTCAGGCCGGGAGGG < 41bp 0.812632083546614 0.421555333650366 0.31559592 0.22230235 prediction 0.625264167093228 Functional Loss - ZBTB8B ENSG00000254553;ENSG00000273274 CDS Human other chr1:32936705 chr1:32936709 nonsynonymous SNV 0.851 0 25 hm5C_associated_SNPs_52854 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:32936709-32936710
64251 chr17 78079646 78079646 1 + G T COAD 78079643 + 78079623 78079663 41 CTCTACAGCGTGGAGTTCTCCGAGGAGCCCTTCGGGGTGAT CTCTACAGCGTGGAGTTCTCCGATGAGCCCTTCGGGGTGAT < 41bp 0.812606469894972 0.439242007944004 0.90408516 0.34869474 prediction 0.625212939789945 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78079643 chr17:78079646 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_52856 0 0 2 NOL12 POSTAR2 ENCODE chr17:78079631-78079690
64251 chr2 44021678 44021678 1 + A C GBM 44021674 + 44021654 44021694 41 ATGGAAAATCTCTTGCAAGCCACAAAAAGCCATGTAGACAA ATGGAAAATCTCTTGCAAGCCACACAAAGCCATGTAGACAA < 41bp 0.854488705334382 0.541947141867384 0.165346 0.012626022 prediction 0.625083126933994 Functional Loss - DYNC2LI1 ENSG00000138036 CDS Human protein_coding chr2:44021674 chr2:44021678 nonsynonymous SNV 0.993 1 25 hm5C_associated_SNPs_52862 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:44021677-44021723
64251 chr10 75535321 75535321 1 + G T OV 75535318 + 75535298 75535338 41 GTTGGAAAGAGATGTGGCTGCAAGATTATTGGCAAGGTCTG GTTGGAAAGAGATGTGGCTGCAATATTATTGGCAAGGTCTG < 41bp 0.81252984140655 0.459154910443196 0.8653071 0.48057348 prediction 0.625059682813099 Functional Loss - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75535318 chr10:75535321 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_52865 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr10:75535309-75535328
64251 chr19 38028480 38028480 1 + G T LUAD 38028477 + 38028457 38028497 41 AGAACATCAGAGAACACACACAGGAGAGAGACCCTTTGTCT AGAACATCAGAGAACACACACAGTAGAGAGACCCTTTGTCT < 41bp 0.812522458363404 0.442221906614042 0.89815104 0.1852715 prediction 0.625044916726808 Functional Loss - ZNF793 ENSG00000188227 CDS Human protein_coding chr19:38028477 chr19:38028480 nonsynonymous SNV 0.989 3 24 hm5C_associated_SNPs_52867 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:38028461-38028491
64251 chrX 48340055 48340055 1 + G T LUAD 48340052 + 48340032 48340072 41 TCTGTCAGGGCTATGACCCTCCCGAGGGCTTCATCCCGGAC TCTGTCAGGGCTATGACCCTCCCTAGGGCTTCATCCCGGAC < 41bp 0.873855249694074 0.561395945282082 0.35923177 0.23861244 prediction 0.624918608823983 Functional Loss - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48340052 chrX:48340055 stopgain 0.993 0 24 hm5C_associated_SNPs_52870 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:48340046-48340074
64251 chr14 64886605 64886605 1 + G T LIHC 64886602 + 64886582 64886622 41 TAAAGGGGAGTGGATCAAACCTGGGGCAATAGTCATCGACT TAAAGGGGAGTGGATCAAACCTGTGGCAATAGTCATCGACT < 41bp 0.812426578054261 0.440810741401235 0.67805403 0.113422364 prediction 0.624853156108523 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64886602 chr14:64886605 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_52873 0 0 14 CSTF2 POSTAR2 GSE37401,GSM917676 chr14:64886579-64886612
64251 chr22 42276797 42276797 1 + G T LUAD 42276795 + 42276775 42276815 41 GGGCACTGCCCACCTCCCGCCTGGACCTGGCCTGCAGCCTC GGGCACTGCCCACCTCCCGCCTTGACCTGGCCTGCAGCCTC < 41bp 0.812402405857648 0.485992343132897 0.43832365 0.13287878 prediction 0.624804811715297 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276795 chr22:42276797 stopgain 1.000 0 23 hm5C_associated_SNPs_52876 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:42276795-42276820
64251 chr15 89169966 89169966 1 + G T rs549443521 89169963 + 89169943 89169983 41 TGCGCAAGGCTGTCCCCTTCCAGGTGGCCCAGAAAGAGGTA TGCGCAAGGCTGTCCCCTTCCAGTTGGCCCAGAAAGAGGTA < 41bp 0.812330511763988 0.437202291003129 0.9030411 0.5711068 prediction 0.624661023527976 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169963 chr15:89169966 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_52879 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:89169946-89169973
64251 chr2 85598666 85598666 1 + G T KIRC 85598663 + 85598643 85598683 41 TGTGCCCTTCATGGAAACCACTGGGAGGACCTGGGCTTTCA TGTGCCCTTCATGGAAACCACTGTGAGGACCTGGGCTTTCA < 41bp 0.812312591338058 0.447337013353681 0.88468546 0.42707285 prediction 0.624625182676116 Functional Loss - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85598663 chr2:85598666 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52882 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:85598658-85598684
64251 chr16 67132628 67132628 1 + G T COAD 67132625 + 67132605 67132645 41 CATTGCAGGCAAGAAGACAACAAGACCCTAGTCCTGGTTCC CATTGCAGGCAAGAAGACAACAATACCCTAGTCCTGGTTCC < 41bp 0.812285990441773 0.46516590043062 0.068463415 0.04240343 prediction 0.624571980883546 Functional Loss - CBFB ENSG00000067955 CDS Human protein_coding chr16:67132625 chr16:67132628 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_52887 0 0 2 BUD13 POSTAR2 ENCODE chr16:67132570-67132643
64251 chr15 38776538 38776538 1 + A C UCEC 38776534 + 38776514 38776554 41 CTCCAGAAATGCCCCCTTGGCAAAAGAGACAAGAAGGCGGC CTCCAGAAATGCCCCCTTGGCAAACGAGACAAGAAGGCGGC < 41bp 0.883601407551785 0.571324089274574 0.10456672 0.1122278 prediction 0.624554636554423 Functional Loss - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38776534 chr15:38776538 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_52890 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:38776499-38776539
64251 chr17 5993702 5993702 1 + G T SARC 5993700 + 5993680 5993720 41 TTACTGCGGGAACCGGCTGCCAGCGGTGAGCGTGGGGCTGG TTACTGCGGGAACCGGCTGCCATCGGTGAGCGTGGGGCTGG < 41bp 0.81226700081888 0.485198212561444 0.86978364 0.50943404 prediction 0.62453400163776 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:5993700 chr17:5993702 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_52891 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:5993689-5993705
64251 chr20 36028594 36028594 1 + G T LUAD 36028592 + 36028572 36028612 41 TGTCTCCAGAGGCCTTCCTGCAGGAGGCCCAGGTCATGAAG TGTCTCCAGAGGCCTTCCTGCATGAGGCCCAGGTCATGAAG < 41bp 0.812266032932634 0.485921769352066 0.9114373 0.39563906 prediction 0.624532065865268 Functional Loss - SRC ENSG00000197122 CDS Human protein_coding chr20:36028592 chr20:36028594 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_52892 0 0 1 PPIG POSTAR2 ENCODE chr20:36028580-36028618
64251 chr14 24644825 24644825 1 + G T UCEC 24644823 + 24644803 24644843 41 CCTGAAGTTCCTACAGAGCCCAGGGAGCCAGGTCAGCAGAG CCTGAAGTTCCTACAGAGCCCATGGAGCCAGGTCAGCAGAG < 41bp 0.836623430522402 0.524395008753341 0.619407 0.0562568 prediction 0.624456843538121 Functional Loss - REC8 ENSG00000100918 CDS Human protein_coding chr14:24644823 chr14:24644825 nonsynonymous SNV 0.361 1 23 hm5C_associated_SNPs_52897 0 0 1 PPIG POSTAR2 ENCODE chr14:24644800-24644827
64251 chr7 100866000 100866000 1 + G T LUAD 100865997 + 100865977 100866017 41 AACTTCCAGGATGACCCCCACGCGGGACTCCCTCAGCTCGG AACTTCCAGGATGACCCCCACGCTGGACTCCCTCAGCTCGG < 41bp 0.870061033650829 0.557836428978053 0.5608838 0.091498405 prediction 0.624449209345552 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100865997 chr7:100866000 synonymous SNV . 0 24 hm5C_associated_SNPs_52898 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:100865978-100866002
64251 chr3 88205447 88205447 1 + G T LUSC 88205444 + 88205424 88205464 41 TTCTTTTTCTCAGCCCCAACCTAGATTCACATGGACTGAAA TTCTTTTTCTCAGCCCCAACCTATATTCACATGGACTGAAA < 41bp 0.851363911972956 0.539168758781031 0.3422097 0.36969316 prediction 0.62439030638385 Functional Loss - C3orf38 ENSG00000179021 CDS Human protein_coding chr3:88205444 chr3:88205447 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_52899 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:88205420-88205447
64251 chr9 98678548 98678548 1 + G T UCEC 98678545 + 98678525 98678565 41 TTAGGGAGTGGGACCTACTTCAAGAAGCAGTTTTCTGACCC TTAGGGAGTGGGACCTACTTCAATAAGCAGTTTTCTGACCC < 41bp 0.862272147336091 0.550128113918376 0.66529834 0.18727937 prediction 0.624288066835429 Functional Loss - ERCC6L2 ENSG00000182150 CDS Human protein_coding chr9:98678545 chr9:98678548 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_52904 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:98678520-98678548
64251 chr10 72434641 72434641 1 + G T BLCA 72434638 + 72434618 72434658 41 CAGGATCCTCAGTGGAGTGGCAGGAGGATTTTCGGGAGCTG CAGGATCCTCAGTGGAGTGGCAGTAGGATTTTCGGGAGCTG < 41bp 0.812139867899602 0.433449480076369 0.87536025 0.61717504 prediction 0.624279735799204 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72434638 chr10:72434641 stopgain 1.000 1 24 hm5C_associated_SNPs_52905 0 0 1 SUB1 POSTAR2 ENCODE chr10:72434635-72434681
64251 chr20 62521335 62521335 1 + A C rs41278202 62521331 + 62521311 62521351 41 TTCACCCGCTGCAGAGCACACGCAACCCAGCCTCAGCATCA TTCACCCGCTGCAGAGCACACGCACCCCAGCCTCAGCATCA < 41bp 0.812133209365418 0.453824427555591 0.099044204 0.039917707 prediction 0.624266418730836 Functional Loss - TPD52L2 ENSG00000101150 UTR3 Human protein_coding chr20:62521331 chr20:62521335 . 0.000 0 25 hm5C_associated_SNPs_52906 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:62521332-62521370
64251 chr17 47656507 47656507 1 + G T HNSC 47656504 + 47656484 47656524 41 ACCCAGCCAAGATCTGCTCCCGAGACCACGCTCAGAGCTCA ACCCAGCCAAGATCTGCTCCCGATACCACGCTCAGAGCTCA < 41bp 0.812120818158437 0.447642666884465 0.48336613 0.08475444 prediction 0.624241636316875 Functional Loss - NXPH3 ENSG00000182575 CDS Human protein_coding chr17:47656504 chr17:47656507 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_52909 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:47656491-47656529
64251 chr16 67201447 67201447 1 + G T UCEC 67201445 + 67201425 67201465 41 CCCCATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTG CCCCATCATCTCTGACATCCCATAAGACTCTCCATCCCCTG < 41bp 0.812105977147413 0.485200008875941 0.3722976 0.026865572 prediction 0.624211954294826 Functional Loss - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67201445 chr16:67201447 stopgain 0.996 0 23 hm5C_associated_SNPs_52910 0 0 5 DDX24 POSTAR2 ENCODE chr16:67201443-67201496
64251 chr8 56910944 56910944 1 + A C BLCA 56910940 + 56910920 56910960 41 GCATACATCGAGCGGAAGAACTACATTCACCGGGACCTGCG GCATACATCGAGCGGAAGAACTACCTTCACCGGGACCTGCG < 41bp 0.812104661729877 0.397094093711082 0.91822445 0.3778673 prediction 0.624209323459753 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56910940 chr8:56910944 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_52911 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:56910925-56910953
64251 chr14 24620821 24620821 1 + A T rs149481717 24620817 + 24620797 24620837 41 GCCAACGCCTAGAGCCCTTCCGCCAGCGCCTCTGGGACAGT GCCAACGCCTAGAGCCCTTCCGCCTGCGCCTCTGGGACAGT < 41bp 0.81209343930329 0.48717174274848 0.32214558 0.20064431 prediction 0.624186878606581 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24620817 chr14:24620821 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_52912 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr14:24620795-24620840
64251 chr6 112671390 112671390 1 + G T LUSC 112671388 + 112671368 112671408 41 GAGAGGTGAAGTCATGGTCCCTGGGCGTCTGCAAGGAGCCG GAGAGGTGAAGTCATGGTCCCTTGGCGTCTGCAAGGAGCCG < 41bp 0.829617461770366 0.517527429506457 0.33759153 0.06985438 prediction 0.624180064527819 Functional Loss - RFPL4B ENSG00000251258 CDS Human protein_coding chr6:112671388 chr6:112671390 synonymous SNV . 0 23 hm5C_associated_SNPs_52913 0 0 1 SND1 POSTAR2 ENCODE chr6:112671349-112671446
64251 chr19 12298356 12298356 1 + G T LUAD 12298353 + 12298333 12298373 41 AAGACACATGATAAAACATACTGGAGAAGGACCTTATAAAT AAGACACATGATAAAACATACTGTAGAAGGACCTTATAAAT < 41bp 0.837505304661366 0.525417998988172 0.29468757 0.06494552 prediction 0.624174611346388 Functional Loss - ZNF136 ENSG00000196646 CDS Human protein_coding chr19:12298353 chr19:12298356 nonsynonymous SNV 0.004 3 24 hm5C_associated_SNPs_52914 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:12298342-12298373
64251 chr2 219603604 219603604 1 + G T LUAD 219603601 + 219603581 219603621 41 ATCGGTCAGGCGGGTCCTCCCTGGTGCCTCAGATACCTTGG ATCGGTCAGGCGGGTCCTCCCTGTTGCCTCAGATACCTTGG < 41bp 0.812086326293339 0.433386402193665 0.44005752 0.29495138 prediction 0.624172652586678 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603601 chr2:219603604 nonsynonymous SNV 0.146 1 24 hm5C_associated_SNPs_52915 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:219603567-219603610
64251 chr1 90473240 90473240 1 + A C LGG 90473236 + 90473216 90473256 41 GAGAGGAACGCCTGCTTATCCTGAAAGTACGTTTGGAAGCA GAGAGGAACGCCTGCTTATCCTGACAGTACGTTTGGAAGCA < 41bp 0.889375943143369 0.577323164169096 0.18369466 0.13290328 prediction 0.624105557948547 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473236 chr1:90473240 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_52919 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:90473199-90473241
64251 chr1 171753159 171753159 1 + G T BRCA 171753157 + 171753137 171753177 41 ACAGGTGGACAGGATGCTGGCTGAGGTTGGCCGTGTCCTGC ACAGGTGGACAGGATGCTGGCTTAGGTTGGCCGTGTCCTGC < 41bp 0.827407029113371 0.515408970352483 0.48272428 0.3884073 prediction 0.623996117521777 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753157 chr1:171753159 stopgain 1.000 1 23 hm5C_associated_SNPs_52926 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:171753136-171753159
64251 chr22 51009848 51009848 1 + G T UCEC 51009845 + 51009825 51009865 41 CGCGATCTGCACAAAGGCATCAGGGCTGGTCCGGCACTTCT CGCGATCTGCACAAAGGCATCAGTGCTGGTCCGGCACTTCT < 41bp 0.811965663492328 0.443124637378534 0.89630747 0.3157553 prediction 0.623931326984656 Functional Loss - CPT1B ENSG00000205560 CDS Human protein_coding chr22:51009845 chr22:51009848 nonsynonymous SNV 0.701 5 24 hm5C_associated_SNPs_52928 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:51009819-51009857
64251 chr12 8925972 8925972 1 + G T UCEC 8925970 + 8925950 8925990 41 AAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTGGGG AAGGGAAGCAGCTAGCTATCCATGTGTCTAATATCCTGGGG < 41bp 0.811958956860207 0.498855543670204 0.9189295 0.38947397 prediction 0.623917913720414 Functional Loss - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8925970 chr12:8925972 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_52930 0 0 1 DDX24 POSTAR2 ENCODE chr12:8925914-8925974
64251 chr20 30371571 30371571 1 + G T UCEC 30371568 + 30371548 30371588 41 GAAGGTGGGCCCATCTTGCCCAAGAAACCACCTGTGAAACC GAAGGTGGGCCCATCTTGCCCAATAAACCACCTGTGAAACC < 41bp 0.811954451808597 0.437171868174324 0.24312237 0.07387063 prediction 0.623908903617193 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30371568 chr20:30371571 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_52931 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:30371569-30371583
64251 chr4 151505070 151505070 1 + G T STAD 151505067 + 151505047 151505087 41 CGGACTGGGACGAGTCGTGCCTGGGCGACCGGCTCAACGGC CGGACTGGGACGAGTCGTGCCTGTGCGACCGGCTCAACGGC < 41bp 0.873764707027397 0.561836171167294 0.19254512 0.008518487 prediction 0.623857071720205 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151505067 chr4:151505070 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_52936 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr4:151505042-151505079
64251 chr5 67592111 67592111 1 + G T UCEC 67592108 + 67592088 67592128 41 AAAACCTGTTGCGAGGGAAGCGAGATGGCACTTTTCTTGTC AAAACCTGTTGCGAGGGAAGCGATATGGCACTTTTCTTGTC < 41bp 0.851850840160309 0.539940836116861 0.8980267 0.5892294 prediction 0.623820008086896 Functional Loss - PIK3R1 ENSG00000145675 CDS Human protein_coding chr5:67592108 chr5:67592111 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_52940 0 0 1 GRWD1 POSTAR2 ENCODE chr5:67591998-67592174
64251 chr3 183887980 183887980 1 + G T LUAD 183887978 + 183887958 183887998 41 GAGCTGGGCTACAGCTACGGCGGGGGCAGCGCCAGCAGTCA GAGCTGGGCTACAGCTACGGCGTGGGCAGCGCCAGCAGTCA < 41bp 0.827240403050895 0.515330416324834 0.88961715 0.17886665 prediction 0.623819973452121 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183887978 chr3:183887980 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_52941 0 0 2 DDX24 POSTAR2 ENCODE chr3:183887938-183888002
64251 chr9 131285000 131285000 1 + G T THCA 131284997 + 131284977 131285017 41 GAGAGGAAGGTGCAAGCCCTCTCGGAGATGGCATCTGAACA GAGAGGAAGGTGCAAGCCCTCTCTGAGATGGCATCTGAACA < 41bp 0.811903245804436 0.453850271179177 0.32934445 0.2923317 prediction 0.623806491608871 Functional Loss - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131284997 chr9:131285000 synonymous SNV . 0 24 hm5C_associated_SNPs_52942 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131284989-131285021
64251 chr11 117152800 117152800 1 + G T COAD 117152798 + 117152778 117152818 41 CCCCTTCCTGGCTCCCATGGCAGAAATAGCCCTGGCTTGGG CCCCTTCCTGGCTCCCATGGCATAAATAGCCCTGGCTTGGG < 41bp 0.830165845900401 0.518285474431314 0.2302419 0.023203254 prediction 0.623760742938173 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152798 chr11:117152800 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_52943 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:117152776-117152828
64251 chr11 63719960 63719960 1 + G T LUSC 63719957 + 63719937 63719977 41 GACCGAGCCTGGTACCTCATCGCGTGGGAAAACAGCTCCGT GACCGAGCCTGGTACCTCATCGCTTGGGAAAACAGCTCCGT < 41bp 0.811876267788845 0.430353203509855 0.56567657 0.13541627 prediction 0.623752535577691 Functional Loss - NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719957 chr11:63719960 synonymous SNV . 0 24 hm5C_associated_SNPs_52946 0 0 3 GRWD1 POSTAR2 ENCODE chr11:63719953-63720040
64251 chr1 44437304 44437304 1 + G T LUAD 44437302 + 44437282 44437322 41 GCTGCTCTTGGGGTGGGCACCAGGTCAACCCTTCTCCTCCT GCTGCTCTTGGGGTGGGCACCATGTCAACCCTTCTCCTCCT < 41bp 0.811856667698114 0.482873507034565 0.880387 0.1033552 prediction 0.623713335396228 Functional Loss - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437302 chr1:44437304 nonsynonymous SNV 0.857 1 23 hm5C_associated_SNPs_52948 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:44437282-44437304
64251 chr2 206580979 206580979 1 + G T LUAD 206580977 + 206580957 206580997 41 GCAGACCTCCTGGGCAAACACTGTGGGAACATCGCCCCGCC GCAGACCTCCTGGGCAAACACTTTGGGAACATCGCCCCGCC < 41bp 0.821139311006254 0.509310801265291 0.8246975 0.28265846 prediction 0.623657019481926 Functional Loss - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206580977 chr2:206580979 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_52951 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:206580974-206581012
64251 chr10 99520365 99520365 1 + A C rs1047537 99520361 + 99520341 99520381 41 ATGAGGGGGCTGAGAGGTTTCTACACTCGAGGAGCAGGGGT ATGAGGGGGCTGAGAGGTTTCTACCCTCGAGGAGCAGGGGT < 41bp 0.87549088847703 0.563667279371771 0.823815 0.22676337 prediction 0.623647218210518 Functional Loss - ZFYVE27 ENSG00000155256 UTR3 Human protein_coding chr10:99520361 chr10:99520365 . . 0 25 hm5C_associated_SNPs_52952 1 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:99520365-99520366
64251 chr4 141300287 141300287 1 + G T COAD 141300284 + 141300264 141300304 41 TCTTATTGTAGACCATTCCTCAAGAATTTTGTATCCAAGGC TCTTATTGTAGACCATTCCTCAATAATTTTGTATCCAAGGC < 41bp 0.811811201358169 0.471932844423115 0.28140092 0.11953077 prediction 0.623622402716339 Functional Loss - SCOC ENSG00000153130 CDS Human protein_coding chr4:141300284 chr4:141300287 nonsynonymous SNV 0.018 2 24 hm5C_associated_SNPs_52953 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:141300274-141300294
64251 chr9 100405549 100405549 1 + G T UCEC 100405546 + 100405526 100405566 41 TTAGTTGGACTACTGAATGCCAGGAATTACAATTTTGGTGG TTAGTTGGACTACTGAATGCCAGTAATTACAATTTTGGTGG < 41bp 0.811807750461877 0.460158769830803 0.47955495 0.069818646 prediction 0.623615500923754 Functional Loss - NCBP1 ENSG00000136937 CDS Human protein_coding chr9:100405546 chr9:100405549 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_52954 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:100405499-100405568
64251 chr8 56792459 56792459 1 + G T rs572269043 56792456 + 56792436 56792476 41 CCGGCCGTGGCGCCTCCGGGCCAGACGCGCTGCAGCCTCCA CCGGCCGTGGCGCCTCCGGGCCATACGCGCTGCAGCCTCCA < 41bp 0.81847132108695 0.506669067092588 0.6473745 0.4900913 prediction 0.623604507988723 Functional Loss - LYN ENSG00000254087 UTR5 Human protein_coding chr8:56792456 chr8:56792459 . . 0 24 hm5C_associated_SNPs_52955 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr8:56792449-56792474
64251 chr5 99871249 99871249 1 + G T LUAD 99871247 + 99871227 99871267 41 CGGGAACGATGAAGGCCTCGCAGTGCTGCTGCTGTCTCAGC CGGGAACGATGAAGGCCTCGCATTGCTGCTGCTGTCTCAGC < 41bp 0.811778874392208 0.483095531193371 0.16372854 0.09703648 prediction 0.623557748784416 Functional Loss - FAM174A ENSG00000174132 CDS Human protein_coding chr5:99871247 chr5:99871249 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_52956 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:99871215-99871251
64251 chr12 121855573 121855573 1 + G T BLCA 121855571 + 121855551 121855591 41 ACGACATGGACACAAGCAGTCTGAATTCTTCAAGGTCCCAG ACGACATGGACACAAGCAGTCTTAATTCTTCAAGGTCCCAG < 41bp 0.815832453464731 0.504062002307417 0.030200154 0.017665893 prediction 0.623540902314627 Functional Loss - RNF34 ENSG00000170633 CDS Human protein_coding chr12:121855571 chr12:121855573 synonymous SNV . 0 23 hm5C_associated_SNPs_52957 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:121855520-121855573
64251 chr20 25656223 25656223 1 - C A THCA 25656226 - 25656206 25656246 41 CTTAGACATCAGTGGACACACTCGGGGGAAAGGCCATTTAA CTTAGACATCAGTGGACACACTCTGGGGAAAGGCCATTTAA < 41bp 0.871854609252088 0.560106730240323 0.05224207 0.01762405 prediction 0.623495758023529 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656226 chr20:25656223 synonymous SNV . 0 24 hm5C_associated_SNPs_52961 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:25656211-25656246
64251 chr1 203276261 203276261 1 + A C DLBC 203276257 + 203276237 203276277 41 TACAAACACCACTGGTTTCCCGAAAAGCCGTCCAAGGGCTC TACAAACACCACTGGTTTCCCGAACAGCCGTCCAAGGGCTC < 41bp 0.811717213971854 0.434414739987414 0.13181484 0.09700796 prediction 0.623434427943707 Functional Loss - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276257 chr1:203276261 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_52965 0 0 1 BUD13 POSTAR2 ENCODE chr1:203276158-203276290
64251 chr10 127442317 127442317 1 + G T UCEC 127442314 + 127442294 127442334 41 ATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTC ATGCTTCTCCTAGTCTCAATCGATAAGAAGTGATGAAACTC < 41bp 0.811655781898046 0.455633258488737 0.9246839 0.23150325 prediction 0.623311563796092 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127442314 chr10:127442317 stopgain 0.998 1 24 hm5C_associated_SNPs_52971 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:127442288-127442328
64251 chr21 37785326 37785326 1 + G T UCEC 37785323 + 37785303 37785343 41 CCTGATACAGCAAAGAAAACCAAGAGTCAGACACATCGAGG CCTGATACAGCAAAGAAAACCAATAGTCAGACACATCGAGG < 41bp 0.851339275988877 0.539694465036853 0.18156344 0.8360024 prediction 0.623289621904048 Functional Loss - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785323 chr21:37785326 nonsynonymous SNV 0.987 2 24 hm5C_associated_SNPs_52972 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:37785323-37785383
64251 chr22 42276875 42276875 1 + G T UCEC 42276872 + 42276852 42276892 41 CGCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGTGCCG CGCCTGGTGCGCTGGCTGCTCAATAAAGTCTTCCAGTGCCG < 41bp 0.884045840571166 0.572448009692449 0.42413634 0.15503111 prediction 0.623195661757435 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276872 chr22:42276875 stopgain 0.999 2 24 hm5C_associated_SNPs_52977 0 0 2 GRWD1 POSTAR2 ENCODE chr22:42276846-42276875
64251 chr2 220044485 220044485 1 + G T OV 220044483 + 220044463 220044503 41 CCAGAGGAGCCACACTCTGACAGGTGAGTACAGGCCACCTC CCAGAGGAGCCACACTCTGACATGTGAGTACAGGCCACCTC < 41bp 0.838870582982589 0.527274656205857 0.8917733 0.26246142 prediction 0.623191853553464 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044483 chr2:220044485 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_52979 0 0 4 DDX3X POSTAR2 ENCODE chr2:220044460-220044485
64251 chr12 98987752 98987752 1 + G T UCEC 98987749 + 98987729 98987769 41 AACCGTCGCTCCCTCCTCCCCTAGAAAGATGTTCTCGTCCG AACCGTCGCTCCCTCCTCCCCTATAAAGATGTTCTCGTCCG < 41bp 0.866585585420407 0.554994086218742 0.67658293 0.82031107 prediction 0.62318299840333 Functional Loss - SLC25A3 ENSG00000075415 splicing Human protein_coding chr12:98987749 chr12:98987752 . . 0 24 hm5C_associated_SNPs_52980 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:98987724-98987752
64251 chr4 113571678 113571678 1 + G T UCEC 113571675 + 113571655 113571695 41 AATGCAACAGGACCACAGTTCGTGAGTGGAGTGATTGTGAA AATGCAACAGGACCACAGTTCGTTAGTGGAGTGATTGTGAA < 41bp 0.865190747307142 0.553622858939092 0.25173566 0.030671567 prediction 0.6231357767361 Functional Loss - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113571675 chr4:113571678 synonymous SNV . 0 24 hm5C_associated_SNPs_52984 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:113571628-113571699
64251 chr22 21288098 21288098 1 + G T CESC 21288096 + 21288076 21288116 41 CCCACCAATGGGATCTGTCTCAGCACCCAACCTGCCTACAG CCCACCAATGGGATCTGTCTCATCACCCAACCTGCCTACAG < 41bp 0.813691633570855 0.502148704048393 0.8874116 0.22711426 prediction 0.623085859044926 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21288096 chr22:21288098 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_52989 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:21288073-21288107
64251 chr5 44809482 44809482 1 + G T LUAD 44809479 + 44809459 44809499 41 AACCTGAACCTGCGCTGGACCTCGCGGCGCTGCGTGCGGTC AACCTGAACCTGCGCTGGACCTCTCGGCGCTGCGTGCGGTC < 41bp 0.811526074687783 0.448460725429694 0.20851278 0.026350796 prediction 0.623052149375566 Functional Loss - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809479 chr5:44809482 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_52990 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:44809452-44809484
64251 chr4 110481517 110481517 1 + G T rs573198533 110481515 + 110481495 110481535 41 TGCTCCAGAGGGGCCTCTGGCCGTGGCGCACGCGGCTGCTG TGCTCCAGAGGGGCCTCTGGCCTTGGCGCACGCGGCTGCTG < 41bp 0.818870582989414 0.507364222494068 0.5810703 0.12761128 prediction 0.623012720990691 Functional Loss - MCUB ENSG00000005059 CDS Human protein_coding chr4:110481515 chr4:110481517 synonymous SNV . 0 23 hm5C_associated_SNPs_52994 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:110481500-110481520
64251 chr1 231678318 231678318 1 + G T BLCA 231678316 + 231678296 231678336 41 CCAGGTAGCCCAAGAGCTATCAGGGGAAGATATGCATCAGT CCAGGTAGCCCAAGAGCTATCATGGGAAGATATGCATCAGT < 41bp 0.813067927081491 0.501564118733181 0.9473204 0.90187085 prediction 0.623007616696619 Functional Loss - TSNAX ENSG00000116918;ENSG00000270106 CDS Human other chr1:231678316 chr1:231678318 nonsynonymous SNV 0.517 4 23 hm5C_associated_SNPs_52995 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:231678300-231678320
64251 chr11 64087315 64087315 1 + G T STAD 64087312 + 64087292 64087332 41 GGGTGTGCTGTTTGGAGTTCCTGGGGCCTTCACCCCTGGAT GGGTGTGCTGTTTGGAGTTCCTGTGGCCTTCACCCCTGGAT < 41bp 0.811476983449757 0.437345174590728 0.90733796 0.18938795 prediction 0.622953966899513 Functional Loss - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64087312 chr11:64087315 nonsynonymous SNV 0.938 4 24 hm5C_associated_SNPs_52996 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:64087289-64087333
64251 chr7 98955975 98955975 1 + G T OV 98955973 + 98955953 98955993 41 TTGTGTTCAGGGTCTCGACTCTGAAGACAGAGTTCCTGCCG TTGTGTTCAGGGTCTCGACTCTTAAGACAGAGTTCCTGCCG < 41bp 0.811442397215148 0.498227762773501 0.032960087 0.010522306 prediction 0.622884794430295 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98955973 chr7:98955975 synonymous SNV . 0 23 hm5C_associated_SNPs_53001 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:98955960-98955980
64251 chrX 102005197 102005197 1 + G T LUAD 102005194 + 102005174 102005214 41 GAACTCACCGGGACAGCAATCTGGATTAAAGATACTAGGAC GAACTCACCGGGACAGCAATCTGTATTAAAGATACTAGGAC < 41bp 0.848222460594822 0.53680621529225 0.38655514 0.18040472 prediction 0.622832490605145 Functional Loss - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102005194 chrX:102005197 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53005 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:102005159-102005221
64251 chr19 13869957 13869957 1 + G T HNSC 13869955 + 13869935 13869975 41 TGGAGACGGACGCCATGTTCCGGCTGGAGCATGGCGAGGCC TGGAGACGGACGCCATGTTCCGTCTGGAGCATGGCGAGGCC < 41bp 0.822921651836252 0.511527989026856 0.6265113 0.25379023 prediction 0.622787325618792 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869955 chr19:13869957 synonymous SNV . 0 23 hm5C_associated_SNPs_53006 0 0 5 BUD13 POSTAR2 ENCODE chr19:13869730-13870004
64251 chr5 53815360 53815360 1 + G T UCEC 53815358 + 53815338 53815378 41 TGGACCTATTAGCGCTGTATCAGGGGCATCTGGCTAACTTC TGGACCTATTAGCGCTGTATCATGGGCATCTGGCTAACTTC < 41bp 0.822417047967627 0.511029887573632 0.96891665 0.9280635 prediction 0.622774320787989 Functional Loss - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815358 chr5:53815360 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53009 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:53815340-53815360
64251 chr3 50129624 50129624 1 + G T UCEC 50129621 + 50129601 50129641 41 GTGATAGATATGATGACTACCGAGACTATGACAGTCCAGAG GTGATAGATATGATGACTACCGATACTATGACAGTCCAGAG < 41bp 0.811348884633538 0.485467855008704 0.84099114 0.6768143 prediction 0.622697769267077 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50129621 chr3:50129624 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_53012 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:50129515-50129698
64251 chr6 114181714 114181714 1 + G T HNSC 114181711 + 114181691 114181731 41 CCCCCTCACAGGAGGCCCAGCCCGAGTGCAGTCCAGAAGCC CCCCCTCACAGGAGGCCCAGCCCTAGTGCAGTCCAGAAGCC < 41bp 0.865014854287383 0.553703311823645 0.16977498 0.12673175 prediction 0.622623084927477 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181711 chr6:114181714 stopgain 1.000 0 24 hm5C_associated_SNPs_53013 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:114181697-114181724
64251 chr11 836418 836418 1 + G T rs116211118 836415 + 836395 836435 41 TTGGGCTGCTGCGCCACCTTCAAGGAGCGTCGGAACCTGCT TTGGGCTGCTGCGCCACCTTCAATGAGCGTCGGAACCTGCT < 41bp 0.81126136716546 0.436114300710279 0.9198469 0.45811263 prediction 0.622522734330921 Functional Loss - CD151 ENSG00000177697 CDS Human protein_coding chr11:836415 chr11:836418 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_53017 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:836385-836418
64251 chr5 167812361 167812361 1 + G T UCEC 167812359 + 167812339 167812379 41 AGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACTG AGCAGCGCCTGGAGCTTGCACATCAGGAGTACCAGCAACTG < 41bp 0.811212367087338 0.497064572189499 0.8521018 0.57786006 prediction 0.622424734174676 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167812359 chr5:167812361 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53022 0 0 1 GRWD1 POSTAR2 ENCODE chr5:167812215-167812364
64251 chr7 128850908 128850908 1 + G T LUSC 128850906 + 128850886 128850926 41 AGCTCCTGCAGAACCCAGGCCAGGAGCTGTCCTTCAGCATG AGCTCCTGCAGAACCCAGGCCATGAGCTGTCCTTCAGCATG < 41bp 0.811178650185731 0.482058999521336 0.6061703 0.119280785 prediction 0.622357300371463 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128850906 chr7:128850908 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_53024 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128850896-128850922
64251 chr12 3387608 3387608 1 + G T OV 3387605 + 3387585 3387625 41 AGCTCTGTGGCTGTGGGCTGCTGGGAGTGGGCATCTGGCTC AGCTCTGTGGCTGTGGGCTGCTGTGAGTGGGCATCTGGCTC < 41bp 0.81117718876842 0.435841099178894 0.8111138 0.24107891 prediction 0.62235437753684 Functional Loss - TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3387605 chr12:3387608 stopgain 0.997 1 24 hm5C_associated_SNPs_53025 0 0 5 DDX3X POSTAR2 ENCODE chr12:3387584-3387628
64251 chr18 8784116 8784116 1 + G T COAD 8784113 + 8784093 8784133 41 CCGGGGGTGGGGCCCCCCTGCAGGAGGAGCTGAAGTCAGCC CCGGGGGTGGGGCCCCCCTGCAGTAGGAGCTGAAGTCAGCC < 41bp 0.883652697185395 0.572533232959537 0.8580432 0.33725828 prediction 0.622238928451716 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784113 chr18:8784116 stopgain 0.998 0 24 hm5C_associated_SNPs_53031 0 0 2 DDX24 POSTAR2 ENCODE chr18:8784083-8784118
64251 chr3 179294470 179294470 1 + G T UCEC 179294467 + 179294447 179294487 41 TGCAGTGCAGAGAACTCTTCCAAGAAATGAATATTGAATTG TGCAGTGCAGAGAACTCTTCCAATAAATGAATATTGAATTG < 41bp 0.811107102290784 0.457887715804322 0.3654679 0.076945454 prediction 0.622214204581569 Functional Loss - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179294467 chr3:179294470 stopgain 0.999 1 24 hm5C_associated_SNPs_53033 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:179294437-179294493
64251 chr10 104679282 104679282 1 + A C LUSC 104679278 + 104679258 104679298 41 GGCCTCGTGGCCGTGGTAGTCTCCACCATCGGTATCGTCAT GGCCTCGTGGCCGTGGTAGTCTCCCCCATCGGTATCGTCAT < 41bp 0.811098110902169 0.41019967094201 0.95321715 0.40089542 prediction 0.622196221804338 Functional Loss - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679278 chr10:104679282 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_53035 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr10:104679264-104679294
64251 chr17 57851127 57851127 1 + G T THYM 57851125 + 57851105 57851145 41 TTTCACCTAGGGTATCGGTACAGCAATCGGAGAGCTGCCTC TTTCACCTAGGGTATCGGTACATCAATCGGAGAGCTGCCTC < 41bp 0.81837334551973 0.507284630139004 0.25568798 0.17780492 prediction 0.622177430761452 Functional Loss - VMP1 ENSG00000062716 CDS Human protein_coding chr17:57851125 chr17:57851127 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_53037 0 0 15 U2AF2 POSTAR2 GSE83923,CSM2221660 chr17:57851126-57851127
64251 chr6 27101145 27101145 1 + G T LUAD 27101142 + 27101122 27101162 41 ACGAGGAGCTCAACAAGCTGCTGGGCAAAGTCACCATCGCA ACGAGGAGCTCAACAAGCTGCTGTGCAAAGTCACCATCGCA < 41bp 0.811069247149977 0.460037806216439 0.20119464 0.05306849 prediction 0.622138494299954 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101142 chr6:27101145 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_53039 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27101120-27101200
64251 chr22 40803271 40803271 1 + G T STAD 40803269 + 40803249 40803289 41 ACGGAACTGGTGGCTGACCTCCGGGAAGCCATCCTGCGCGT ACGGAACTGGTGGCTGACCTCCTGGAAGCCATCCTGCGCGT < 41bp 0.828613916871943 0.517561546687515 0.70766985 0.14728987 prediction 0.622104740368856 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40803269 chr22:40803271 nonsynonymous SNV 0.984 4 23 hm5C_associated_SNPs_53041 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr22:40803260-40803280
64251 chr17 78210787 78210787 1 + G T LUAD 78210784 + 78210764 78210804 41 TGCGTACTCCTTCGAGGTGACTGGATACCAGCCTTTCATCC TGCGTACTCCTTCGAGGTGACTGTATACCAGCCTTTCATCC < 41bp 0.88223301601176 0.571192659858713 0.91255116 0.8704942 prediction 0.622080712306094 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78210784 chr17:78210787 nonsynonymous SNV 0.983 4 24 hm5C_associated_SNPs_53042 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:78210767-78210798
64251 chr1 90048770 90048770 1 + G T UCEC 90048767 + 90048747 90048787 41 CCTCTGAAACTCTCCAAGTCCAAGATTTTGCTTTCGTCCTC CCTCTGAAACTCTCCAAGTCCAATATTTTGCTTTCGTCCTC < 41bp 0.87173384112664 0.560712463582457 0.18773007 0.098398626 prediction 0.622042755088368 Functional Loss - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048767 chr1:90048770 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_53046 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:90048758-90048773
64251 chr11 82880562 82880562 1 + G T COAD 82880559 + 82880539 82880579 41 ATTACATGGTCAGCCAGGTCCTAGATTTGAAAGGACTCCTG ATTACATGGTCAGCCAGGTCCTATATTTGAAAGGACTCCTG < 41bp 0.811015796495122 0.458341390734462 0.38158432 0.35114852 prediction 0.622031592990245 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82880559 chr11:82880562 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53049 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:82880540-82880580
64251 chr4 151504729 151504729 1 + G T UCEC 151504727 + 151504707 151504747 41 TGCACCGGGATCTGGCCTCGCAGCGCGGCACAGTGGCCTAT TGCACCGGGATCTGGCCTCGCATCGCGGCACAGTGGCCTAT < 41bp 0.810991277820688 0.484247262801281 0.7961712 0.33246797 prediction 0.621982555641376 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504727 chr4:151504729 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_53052 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr4:151504714-151504745
64251 chr19 1077968 1077968 1 + G T SARC 1077966 + 1077946 1077986 41 GCGGAGGAGGAGCAGGCTGGCAGCGCGCCGGGAGCAGGCAG GCGGAGGAGGAGCAGGCTGGCATCGCGCCGGGAGCAGGCAG < 41bp 0.837154448497672 0.5261859116472 0.868273 0.81969154 prediction 0.621937073700944 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1077966 chr19:1077968 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_53056 0 0 2 GRWD1 POSTAR2 ENCODE chr19:1077865-1077978
64251 chr20 45353864 45353864 1 + G T HNSC 45353862 + 45353842 45353882 41 TGGGGGCTCTCCTCGCCTCCCTGGTTGGTGGCTTCCTCATT TGGGGGCTCTCCTCGCCTCCCTTGTTGGTGGCTTCCTCATT < 41bp 0.834098176401177 0.52313100838756 0.255214 0.07003382 prediction 0.621934336027234 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353862 chr20:45353864 synonymous SNV . 0 23 hm5C_associated_SNPs_53057 0 0 2 DDX3X POSTAR2 ENCODE chr20:45353786-45353889
64251 chr19 35501099 35501099 1 + G T LUAD 35501096 + 35501076 35501116 41 AACATCTTCCGCTGGGAGACCACGGTGAGCCCGCAGCGGGG AACATCTTCCGCTGGGAGACCACTGTGAGCCCGCAGCGGGG < 41bp 0.810940734924254 0.43126189931663 0.41587797 0.09412256 prediction 0.621881469848508 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501096 chr19:35501099 synonymous SNV . 0 24 hm5C_associated_SNPs_53060 0 0 3 GRWD1 POSTAR2 ENCODE chr19:35501046-35501099
64251 chr13 26974649 26974649 1 + G T LUAD 26974647 + 26974627 26974667 41 TTACCTCAGAACAGGCTATGCAGGACCCCTATTTCTTAGAA TTACCTCAGAACAGGCTATGCATGACCCCTATTTCTTAGAA < 41bp 0.811873758754442 0.500954601712447 0.07996428 0.0485816 prediction 0.621838314083991 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26974647 chr13:26974649 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53061 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:26974641-26974665
64251 chr1 27269461 27269461 1 + G T UCEC 27269459 + 27269439 27269479 41 GGTGGGGCTCAAGGGGCAGCCAGCGATCATTGATGGGGAGC GGTGGGGCTCAAGGGGCAGCCATCGATCATTGATGGGGAGC < 41bp 0.820210429005302 0.509297801263281 0.83885956 0.2791106 prediction 0.621825255484042 Functional Loss - NUDC ENSG00000090273 CDS Human protein_coding chr1:27269459 chr1:27269461 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_53062 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:27269445-27269478
64251 chr19 41092770 41092770 1 + G T KIRC 41092767 + 41092747 41092787 41 GCACCCGGAGACTGTGGGCTCGGGGCCTCAGCTCTTCCAGA GCACCCGGAGACTGTGGGCTCGGTGCCTCAGCTCTTCCAGA < 41bp 0.886990960604194 0.576078350858244 0.94113964 0.3556289 prediction 0.621825219491901 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41092767 chr19:41092770 nonsynonymous SNV 0.987 3 24 hm5C_associated_SNPs_53063 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:41092760-41092798
64251 chr15 91479636 91479636 1 + G T UCEC 91479633 + 91479613 91479653 41 AGATGTGTGAGCTTGGAGCCCAAGAACAAAGTTTTCCAGGA AGATGTGTGAGCTTGGAGCCCAATAACAAAGTTTTCCAGGA < 41bp 0.810858139700929 0.442661871209054 0.57820266 0.27883053 prediction 0.621716279401859 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91479633 chr15:91479636 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53067 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:91479609-91479639
64251 chrX 105970199 105970199 1 + G T STAD 105970197 + 105970177 105970217 41 CGCGGTGGCTGCGGCTTTTCCAGATTGCTGGCATGGTGCTT CGCGGTGGCTGCGGCTTTTCCATATTGCTGGCATGGTGCTT < 41bp 0.835467760299353 0.524633480150556 0.86207205 0.5587978 prediction 0.621668560297595 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970197 chrX:105970199 nonsynonymous SNV 0.508 0 23 hm5C_associated_SNPs_53069 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chrX:105970172-105970214
64251 chr15 30396069 30396069 1 + G T CESC 30396067 + 30396047 30396087 41 GCCATGACAGCGGCTCGGGACTGGCTCCTTTTCCGCGCCCC GCCATGACAGCGGCTCGGGACTTGCTCCTTTTCCGCGCCCC < 41bp 0.822212675241562 0.511389703479209 0.29243663 0.11886364 prediction 0.621645943524706 Functional Loss - ULK4P3 ENSG00000178081 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:30396067 chr15:30396069 . . 0 23 hm5C_associated_SNPs_53071 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:30396052-30396106
64251 chr22 50277582 50277582 1 + G T CESC 50277580 + 50277560 50277600 41 GGCGCGCTGTTCTCCCAGTACAGCAGCACCCTATACGACGT GGCGCGCTGTTCTCCCAGTACATCAGCACCCTATACGACGT < 41bp 0.816671307182594 0.505923856508957 0.14885032 0.14413992 prediction 0.621494901347274 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50277580 chr22:50277582 nonsynonymous SNV 0.808 2 23 hm5C_associated_SNPs_53076 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:50277582-50277583
64251 chr22 35811893 35811893 1 + G T UCEC 35811891 + 35811871 35811911 41 TGATGAGGGACCCTTCGTCCCGGAATTTCATCATGGAGGGC TGATGAGGGACCCTTCGTCCCGTAATTTCATCATGGAGGGC < 41bp 0.810731904271557 0.488290197581794 0.5526052 0.19456679 prediction 0.621463808543113 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811891 chr22:35811893 synonymous SNV . 0 23 hm5C_associated_SNPs_53077 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr22:35811893-35811915
64251 chr14 68112513 68112513 1 + G T UCEC 68112511 + 68112491 68112531 41 CATTTCTCCTCAGAGAACTACAGGATAAGGTCAGTGGGCCA CATTTCTCCTCAGAGAACTACATGATAAGGTCAGTGGGCCA < 41bp 0.816370806829936 0.505650550214509 0.4924882 0.24044615 prediction 0.621440513230854 Functional Loss - ARG2 ENSG00000081181 CDS Human protein_coding chr14:68112511 chr14:68112513 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_53079 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:68112483-68112519
64251 chr16 28507282 28507282 1 + G T LUSC 28507280 + 28507260 28507300 41 GAAGCCAGGACAATCTCAGGCGGGGAGGAGGCTGAGACAGC GAAGCCAGGACAATCTCAGGCGTGGAGGAGGCTGAGACAGC < 41bp 0.810704511703192 0.486527826487098 0.6799695 0.20946747 prediction 0.621409023406384 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507280 chr16:28507282 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_53081 0 0 1 DGCR8 POSTAR2 ENCODE chr16:28507270-28507312
64251 chr19 7975355 7975355 1 + G T LUAD 7975352 + 7975332 7975372 41 GTGCAGCAAATGCGGCGCTCCGGGAACAAGGAGGAGAACAA GTGCAGCAAATGCGGCGCTCCGGTAACAAGGAGGAGAACAA < 41bp 0.81066720847593 0.444721394838264 0.9171815 0.72320974 prediction 0.621334416951861 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975352 chr19:7975355 synonymous SNV . 0 24 hm5C_associated_SNPs_53086 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:7975340-7975360
64251 chr1 151372962 151372962 1 + G T COAD 151372959 + 151372939 151372979 41 AGATGGACACAGCTATAGTCCTAGAGCTATTCATTCATGGC AGATGGACACAGCTATAGTCCTATAGCTATTCATTCATGGC < 41bp 0.810645528520483 0.453550699936402 0.17978776 0.20664585 prediction 0.621291057040966 Functional Loss - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151372959 chr1:151372962 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_53089 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:151372919-151372966
64251 chr14 24108147 24108147 1 + G T UCEC 24108145 + 24108125 24108165 41 AGGCTTTCTGTGAGGATGAGCAGCACCGGGATAGACAGGAA AGGCTTTCTGTGAGGATGAGCATCACCGGGATAGACAGGAA < 41bp 0.81468471821729 0.504045869163014 0.33685833 0.12678626 prediction 0.621277698108551 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108145 chr14:24108147 nonsynonymous SNV 0.123 4 23 hm5C_associated_SNPs_53091 0 0 4 GRWD1 POSTAR2 ENCODE chr14:24108126-24108159
64251 chr17 19232094 19232094 1 + G T UCEC 19232091 + 19232071 19232111 41 GCCACCGTACAATCTGTCCCCAAGAACTCGGACCCCTGGGC GCCACCGTACAATCTGTCCCCAATAACTCGGACCCCTGGGC < 41bp 0.810638769247699 0.438905105546693 0.18701494 0.01916033 prediction 0.621277538495398 Functional Loss - EPN2 ENSG00000072134 CDS Human protein_coding chr17:19232091 chr17:19232094 nonsynonymous SNV 0.299 1 24 hm5C_associated_SNPs_53092 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:19232094-19232117
64251 chr2 201758087 201758087 1 + A T LUAD 201758083 + 201758063 201758103 41 AGACCTGGACAAAGTCATGTCTGCAGTGAAAGGAATTGACG AGACCTGGACAAAGTCATGTCTGCTGTGAAAGGAATTGACG < 41bp 0.810619179928256 0.494091349540311 0.13943607 0.09836209 prediction 0.621238359856512 Functional Loss - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201758083 chr2:201758087 synonymous SNV . 0 25 hm5C_associated_SNPs_53094 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201758020-201758087
64251 chr10 112360249 112360249 1 + G T UCEC 112360246 + 112360226 112360266 41 TAAATTAGAAGGTATTATTACTCGAGTAGAGACTTATCTCA TAAATTAGAAGGTATTATTACTCTAGTAGAGACTTATCTCA < 41bp 0.810613969584693 0.482604049337259 0.22201917 0.8361528 prediction 0.621227939169387 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112360246 chr10:112360249 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53095 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:112360212-112360302
64251 chr6 116757745 116757745 1 + G T STAD 116757742 + 116757722 116757762 41 CCTGTGGACAGGTGAGGCCACAGGACAGTCTGCCTTTGCAC CCTGTGGACAGGTGAGGCCACAGTACAGTCTGCCTTTGCAC < 41bp 0.810607857574297 0.450291116678211 0.52107155 0.16509297 prediction 0.621215715148594 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116757742 chr6:116757745 nonsynonymous SNV 0.701 1 24 hm5C_associated_SNPs_53096 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:116757738-116757773
64251 chr10 99361669 99361669 1 + G T SARC 99361667 + 99361647 99361687 41 TCCTGGGGGCTCAGGTGTGCCAGCTGGAGCGACTGTGCTGC TCCTGGGGGCTCAGGTGTGCCATCTGGAGCGACTGTGCTGC < 41bp 0.810607637936785 0.47829508462892 0.87344813 0.3056149 prediction 0.62121527587357 Functional Loss - HOGA1 ENSG00000155252;ENSG00000241935;ENSG00000249967 CDS Human other chr10:99361667 chr10:99361669 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_53097 0 0 1 BUD13 POSTAR2 ENCODE chr10:99361610-99361702
64251 chr12 7045579 7045579 1 + A C UCEC 7045575 + 7045555 7045595 41 TTCATCCTCTAGTAGTAGCTCTGCAGCAGCCTCCTCTTCCA TTCATCCTCTAGTAGTAGCTCTGCCGCAGCCTCCTCTTCCA < 41bp 0.81060045917801 0.41430771157188 0.078167886 0.0729363 prediction 0.621200918356019 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045575 chr12:7045579 synonymous SNV . 0 25 hm5C_associated_SNPs_53098 0 0 14 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:7045560-7045580
64251 chr9 140109136 140109136 1 + G T COAD 140109134 + 140109114 140109154 41 AGCTCTTCATGCTGCAGCCGCGGGAGCCAGGTGAGCCCAGC AGCTCTTCATGCTGCAGCCGCGTGAGCCAGGTGAGCCCAGC < 41bp 0.83105242369264 0.52045805145011 0.91122115 0.3331926 prediction 0.62118874448506 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140109134 chr9:140109136 synonymous SNV . 0 23 hm5C_associated_SNPs_53099 0 0 1 PPIG POSTAR2 ENCODE chr9:140109118-140109141
64251 chr15 40757569 40757569 1 + G T COAD 40757567 + 40757547 40757587 41 AAGTGTTTGCATCGCGACATCAGGACCAGAACAGTGTGGCC AAGTGTTTGCATCGCGACATCATGACCAGAACAGTGTGGCC < 41bp 0.810577220461826 0.492429026477144 0.38336337 0.079126775 prediction 0.621154440923652 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40757567 chr15:40757569 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_53101 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:40757567-40757588
64251 chr11 77301163 77301163 1 + G T BLCA 77301161 + 77301141 77301181 41 CCCGGCAGCAGCTGCACAGGCCGGTGGCCCACGCCTTCGTC CCCGGCAGCAGCTGCACAGGCCTGTGGCCCACGCCTTCGTC < 41bp 0.81054963116177 0.460879883462551 0.4353636 0.17451924 prediction 0.62109926232354 Functional Loss - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301161 chr11:77301163 synonymous SNV . 0 23 hm5C_associated_SNPs_53106 0 0 1 DDX3X POSTAR2 ENCODE chr11:77301010-77301177
64251 chr2 97217534 97217534 1 + G T UCEC 97217531 + 97217511 97217551 41 TGCTGGGTGTCCCCCATGGCCAAGGTCCCAGCCGAGAGCCC TGCTGGGTGTCCCCCATGGCCAATGTCCCAGCCGAGAGCCC < 41bp 0.810530518573517 0.427747342011244 0.20880058 0.01991731 prediction 0.621061037147034 Functional Loss - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217531 chr2:97217534 nonsynonymous SNV 0.900 3 24 hm5C_associated_SNPs_53107 0 0 1 RBM15 POSTAR2 ENCODE chr2:97217487-97217553
64251 chr9 311994 311994 1 + G T LUSC 311991 + 311971 312011 41 AAACGTGCTGTGCGACGTGTCTGGGAAAGGCCCCGTCACTG AAACGTGCTGTGCGACGTGTCTGTGAAAGGCCCCGTCACTG < 41bp 0.810506963746813 0.494621929575504 0.27602068 0.019830197 prediction 0.621013927493627 Functional Loss - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:311991 chr9:311994 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53111 0 0 3 FXR2 POSTAR2 ENCODE chr9:311976-312065
64251 chr19 38899416 38899416 1 + G T HNSC 38899414 + 38899394 38899434 41 CTTATGGGCAACGTTCCAGACCGGGGGGGCCGCCCAAATGA CTTATGGGCAACGTTCCAGACCTGGGGGGCCGCCCAAATGA < 41bp 0.820528432751283 0.510102516241067 0.81898916 0.24394634 prediction 0.620851833020433 Functional Loss - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38899414 chr19:38899416 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_53121 0 0 2 UCHL5 POSTAR2 ENCODE chr19:38899392-38899455
64251 chr12 98988083 98988083 1 + G T rs559685708 98988080 + 98988060 98988100 41 TCGGCCTTTTCCACCATAGGCGGGTGTCAGATCCTTGGCCT TCGGCCTTTTCCACCATAGGCGGTTGTCAGATCCTTGGCCT < 41bp 0.833536025213173 0.523124104832428 0.93027484 0.6628797 prediction 0.62082384076149 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98988080 chr12:98988083 synonymous SNV . 0 24 hm5C_associated_SNPs_53122 0 0 2 RBM15 POSTAR2 ENCODE chr12:98988044-98988115
64251 chr14 50088412 50088412 1 + G T UCEC 50088410 + 50088390 50088430 41 TGGACTCACTTCGAAAAGCCCAGGGAATTGACAACGTCCTC TGGACTCACTTCGAAAAGCCCATGGAATTGACAACGTCCTC < 41bp 0.814367806105441 0.503958895008355 0.5526072 0.15993959 prediction 0.620817822194172 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088410 chr14:50088412 nonsynonymous SNV 0.988 3 23 hm5C_associated_SNPs_53123 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:50088370-50088434
64251 chr15 64710845 64710845 1 + G T UCEC 64710842 + 64710822 64710862 41 ACCAGTTGCGAATCCAGGATCAAGAATTTCAGGAAGGCTTT ACCAGTTGCGAATCCAGGATCAATAATTTCAGGAAGGCTTT < 41bp 0.810394942138809 0.440920900664297 0.29503524 0.15862933 prediction 0.620789884277617 Functional Loss - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64710842 chr15:64710845 stopgain 1.000 1 24 hm5C_associated_SNPs_53125 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:64710821-64710859
64251 chr15 73575342 73575342 1 + G T LUAD 73575340 + 73575320 73575360 41 ATGGGAGCCCCACCTCTCCTCTGGACAGTAATATGCTGCTG ATGGGAGCCCCACCTCTCCTCTTGACAGTAATATGCTGCTG < 41bp 0.813799509046584 0.503407897357645 0.39524764 0.10141131 prediction 0.620783223377878 Functional Loss - NEO1 ENSG00000067141 CDS Human protein_coding chr15:73575340 chr15:73575342 synonymous SNV . 0 23 hm5C_associated_SNPs_53126 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:73575320-73575347
64251 chr1 181058374 181058374 1 + G T LUAD 181058372 + 181058352 181058392 41 CCTCCGTCTCAGACGCGCCGCGGGTAGGGGACGAGGTGCCG CCTCCGTCTCAGACGCGCCGCGTGTAGGGGACGAGGTGCCG < 41bp 0.815343357835111 0.504952288764792 0.42651835 0.1645445 prediction 0.620782138140638 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058372 chr1:181058374 synonymous SNV . 0 23 hm5C_associated_SNPs_53127 0 0 2 AARS POSTAR2 ENCODE chr1:181058348-181058448
64251 chr19 19638159 19638159 1 + G T LUAD 19638156 + 19638136 19638176 41 CTGTTACAGGCAGAAACCGACCGGAGGTAGCACCGCAGGGG CTGTTACAGGCAGAAACCGACCGTAGGTAGCACCGCAGGGG < 41bp 0.810378320646868 0.437006500197742 0.5795866 0.1849541 prediction 0.620756641293737 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19638156 chr19:19638159 synonymous SNV . 0 24 hm5C_associated_SNPs_53128 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:19638159-19638160
64251 chr19 19638158 19638158 1 + G T LUAD 19638156 + 19638136 19638176 41 CTGTTACAGGCAGAAACCGACCGGAGGTAGCACCGCAGGGG CTGTTACAGGCAGAAACCGACCTGAGGTAGCACCGCAGGGG < 41bp 0.810378320646868 0.482338045492571 0.5795866 0.36132556 prediction 0.620756641293737 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19638156 chr19:19638158 nonsynonymous SNV 0.900 4 23 hm5C_associated_SNPs_53129 0 0 10 BUD13 POSTAR2 ENCODE chr19:19638105-19638210
64251 chr11 111959707 111959707 1 + G T SARC 111959704 + 111959684 111959724 41 GCTCTGCGATGGACTATTCCCTGGCTGCAGCCCTCACTCTT GCTCTGCGATGGACTATTCCCTGTCTGCAGCCCTCACTCTT < 41bp 0.868933114500592 0.558555342805764 0.20924363 0.106487125 prediction 0.620755543389655 Functional Loss - SDHD ENSG00000204370;ENSG00000255292 CDS Human other chr11:111959704 chr11:111959707 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_53130 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:111959692-111959717
64251 chr22 39069209 39069209 1 + G T SARC 39069206 + 39069186 39069226 41 CCCACTTAATGGAGAAGGAACTGGATGAACTGAGGATCAGC CCCACTTAATGGAGAAGGAACTGTATGAACTGAGGATCAGC < 41bp 0.810354630747466 0.463446722041134 0.4447271 0.23961166 prediction 0.620709261494932 Functional Loss - CBY1 ENSG00000100211 CDS Human protein_coding chr22:39069206 chr22:39069209 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_53132 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39069188-39069236
64251 chr19 8430860 8430860 1 + G T UCEC 8430858 + 8430838 8430878 41 ACACAACTCAAGGCTCAGAACAGCAGGATCCAGCAACTCTT ACACAACTCAAGGCTCAGAACATCAGGATCCAGCAACTCTT < 41bp 0.832080591620753 0.521822489391711 0.25999367 0.13279241 prediction 0.620516204458083 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8430858 chr19:8430860 nonsynonymous SNV 0.984 2 23 hm5C_associated_SNPs_53141 0 0 1 BUD13 POSTAR2 ENCODE chr19:8430776-8430861
64251 chr22 32889166 32889166 1 + G T BRCA 32889163 + 32889143 32889183 41 AACTACGGATCTTCCGACTTCTGGATGTTCGTTCCGTCTTG AACTACGGATCTTCCGACTTCTGTATGTTCGTTCCGTCTTG < 41bp 0.859450606100722 0.54919678464038 0.6522944 0.2365945 prediction 0.620507642920683 Functional Loss - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32889163 chr22:32889166 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53142 0 0 18 FUS POSTAR2 DRA001158,DRS012384 chr22:32889107-32889169
64251 chr17 8157565 8157565 1 + G T THCA 8157562 + 8157542 8157582 41 CTTACTGCTGGATGATGTTGCTCGGGAGTCCTGGCTCCTTC CTTACTGCTGGATGATGTTGCTCTGGAGTCCTGGCTCCTTC < 41bp 0.810252937464036 0.436888052959387 0.29787415 0.43528372 prediction 0.620505874928071 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8157562 chr17:8157565 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_53143 0 0 2 GRWD1 POSTAR2 ENCODE chr17:8157542-8157576
64251 chr8 27310642 27310642 1 + G T UCEC 27310640 + 27310620 27310660 41 TTTTATTGCAGTGGAGTTCACAGGGCCCCCACAGAAGCCCC TTTTATTGCAGTGGAGTTCACATGGCCCCCACAGAAGCCCC < 41bp 0.810251066716643 0.470123631955105 0.90085375 0.3234614 prediction 0.620502133433286 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27310640 chr8:27310642 nonsynonymous SNV 0.880 3 23 hm5C_associated_SNPs_53144 0 0 3 BUD13 POSTAR2 ENCODE chr8:27310628-27310671
64251 chr16 28841204 28841204 1 + G T GBM 28841202 + 28841182 28841222 41 GCCCTTAGAAAAGGACAACTCAGAAGAGTTTCGTCAGCGAG GCCCTTAGAAAAGGACAACTCATAAGAGTTTCGTCAGCGAG < 41bp 0.817760586621926 0.507566523534933 0.31482148 0.07548076 prediction 0.620388126173986 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28841202 chr16:28841204 stopgain 0.996 1 23 hm5C_associated_SNPs_53148 0 0 15 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr16:28841189-28841216
64251 chr10 101507079 101507079 1 + G T LUAD 101507076 + 101507056 101507096 41 TCTTAACCTTGGGATTTGAACGCGTGTTGACCAGTGGATGT TCTTAACCTTGGGATTTGAACGCTTGTTGACCAGTGGATGT < 41bp 0.875417404682171 0.56524942230442 0.7094073 0.2902228 prediction 0.620335964755503 Functional Loss - CUTC ENSG00000119929 CDS Human protein_coding chr10:101507076 chr10:101507079 nonsynonymous SNV 0.689 1 24 hm5C_associated_SNPs_53153 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr10:101507036-101507125
64251 chr16 50109559 50109559 1 + G T MESO 50109556 + 50109536 50109576 41 GTGCTACAGCATTGAACATGCTGGAATCAGCACTGCTTTCT GTGCTACAGCATTGAACATGCTGTAATCAGCACTGCTTTCT < 41bp 0.871297646627354 0.561132307027358 0.273225 0.06854424 prediction 0.620330679199993 Functional Loss - HEATR3 ENSG00000155393 CDS Human protein_coding chr16:50109556 chr16:50109559 stopgain 0.288 1 24 hm5C_associated_SNPs_53155 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr16:50109559-50109560
64251 chr6 110538977 110538977 1 + G T UCEC 110538975 + 110538955 110538995 41 TTCCTCAGTGCAGCCTATGACAGGTATCTTAAGCTCTGGGA TTCCTCAGTGCAGCCTATGACATGTATCTTAAGCTCTGGGA < 41bp 0.810128489991841 0.491679760671708 0.64254856 0.28762114 prediction 0.620256979983682 Functional Loss - CDC40 ENSG00000168438 CDS Human protein_coding chr6:110538975 chr6:110538977 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_53159 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:110538971-110539016
64251 chr11 709421 709421 1 + G T LIHC 709419 + 709399 709439 41 CAAGACACCATGAGCCAGTCCGGGGCCGTGAGCTGCTGCCC CAAGACACCATGAGCCAGTCCGTGGCCGTGAGCTGCTGCCC < 41bp 0.832294172948285 0.522181840514966 0.9038396 0.11221513 prediction 0.620224664866638 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:709419 chr11:709421 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_53164 0 0 3 BUD13 POSTAR2 ENCODE chr11:709395-709433
64251 chr3 10960063 10960063 1 + G T SKCM 10960061 + 10960041 10960081 41 CAGCGGCACCAGCTTCGTGGCTGGGTTTGCCATCTTCTCAG CAGCGGCACCAGCTTCGTGGCTTGGTTTGCCATCTTCTCAG < 41bp 0.810098647983813 0.487934659651968 0.23629257 0.020254314 prediction 0.620197295967627 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10960061 chr3:10960063 nonsynonymous SNV 0.920 5 23 hm5C_associated_SNPs_53165 0 0 1 SND1 POSTAR2 ENCODE chr3:10960027-10960079
64251 chr19 16986880 16986880 1 + G T SARC 16986877 + 16986857 16986897 41 TCCCGCCAGCTGCACCACCTCGTGAGCGATGACGTCTGCCT TCCCGCCAGCTGCACCACCTCGTTAGCGATGACGTCTGCCT < 41bp 0.810089716515224 0.437986279708869 0.87080616 0.3219574 prediction 0.620179433030448 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16986877 chr19:16986880 synonymous SNV . 0 24 hm5C_associated_SNPs_53168 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:16986855-16986893
64251 chr12 56631045 56631045 1 + G T LGG 56631043 + 56631023 56631063 41 GCAGTCCTGGGGGTGGGGCTCAGCCTGGGCCCTGTCCCCCT GCAGTCCTGGGGGTGGGGCTCATCCTGGGCCCTGTCCCCCT < 41bp 0.810056531852001 0.483266481903044 0.8374357 0.8070625 prediction 0.620113063704002 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56631043 chr12:56631045 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_53171 0 0 1 LSM11 POSTAR2 ENCODE chr12:56631020-56631066
64251 chr1 226019628 226019628 1 + A C UCEC 226019624 + 226019604 226019644 41 GGAAGAAGCAGGTGGAGATTCTCAACAGATACCCTCACTTC GGAAGAAGCAGGTGGAGATTCTCACCAGATACCCTCACTTC < 41bp 0.810006523659186 0.388450965728415 0.29588675 0.048832834 prediction 0.620013047318372 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226019624 chr1:226019628 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_53173 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:226019587-226019635
64251 chr3 129017247 129017247 1 + G T rs116232537 129017244 + 129017224 129017264 41 CCTGAGAACTGGGAGAAAGTCTGGGACAACTGGAGGCTGCT CCTGAGAACTGGGAGAAAGTCTGTGACAACTGGAGGCTGCT < 41bp 0.888528601359787 0.578530489209417 0.894175 0.14580852 prediction 0.619996224300741 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:129017244 chr3:129017247 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53175 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:129017234-129017255
64251 chr16 89789568 89789568 1 + G T LUAD 89789565 + 89789545 89789585 41 GGTCGGTGCCCAGCCCCCAACAGGGGCAGAGGAGGGAGCGT GGTCGGTGCCCAGCCCCCAACAGTGGCAGAGGAGGGAGCGT < 41bp 0.878536621712631 0.568544582132396 0.9163027 0.4141255 prediction 0.61998407916047 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789565 chr16:89789568 nonsynonymous SNV 0.111 0 24 hm5C_associated_SNPs_53176 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:89789546-89789575
64251 chr16 67943393 67943393 1 + G T GBM 67943390 + 67943370 67943410 41 TTCGGCCTGGCCAGTGCTCGCAAGAAGGGTGATGACTGCTT TTCGGCCTGGCCAGTGCTCGCAATAAGGGTGATGACTGCTT < 41bp 0.873819366620321 0.563843715625955 0.24268052 0.046976388 prediction 0.619951301988732 Functional Loss - PSKH1 ENSG00000159792 CDS Human protein_coding chr16:67943390 chr16:67943393 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_53177 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:67943392-67943393
64251 chr1 228333221 228333221 1 + G T LUSC 228333218 + 228333198 228333238 41 CTTCTCACCCCCAGGCATGTCGGGCCCCAGGCCTGTGGTGC CTTCTCACCCCCAGGCATGTCGGTCCCCAGGCCTGTGGTGC < 41bp 0.809941421576834 0.441395002597334 0.8457149 0.44343695 prediction 0.619882843153669 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333218 chr1:228333221 nonsynonymous SNV 0.085 1 24 hm5C_associated_SNPs_53183 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228333200-228333240
64251 chr3 71804052 71804052 1 + G T UCEC 71804049 + 71804029 71804069 41 AAGACGGAGAAGAGGCTGTGCAAGATGTTCTACGCCGTCAC AAGACGGAGAAGAGGCTGTGCAATATGTTCTACGCCGTCAC < 41bp 0.844565792229503 0.53465464732155 0.30594462 0.2815725 prediction 0.619822289815906 Functional Loss - GPR27 ENSG00000170837 CDS Human protein_coding chr3:71804049 chr3:71804052 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53185 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:71804039-71804067
64251 chr19 1255693 1255693 1 + G T LUSC 1255691 + 1255671 1255711 41 GATCCGCATGTGCAAGCCCCCGGGTGAGTGGCCACCCTCGG GATCCGCATGTGCAAGCCCCCGTGTGAGTGGCCACCCTCGG < 41bp 0.834754928552459 0.524884021918607 0.9433383 0.42860052 prediction 0.619741813267703 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1255691 chr19:1255693 nonsynonymous SNV 0.845 3 23 hm5C_associated_SNPs_53189 0 0 3 BUD13 POSTAR2 ENCODE chr19:1255670-1255741
64251 chr19 18700263 18700263 1 + G T UCEC 18700260 + 18700240 18700280 41 AGGGCCTGAGAGCCTGGGGGCGCGGCCTCAGGGTCCCCACA AGGGCCTGAGAGCCTGGGGGCGCTGCCTCAGGGTCCCCACA < 41bp 0.809869338563834 0.432935137373609 0.82842386 0.31615156 prediction 0.619738677127668 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18700260 chr19:18700263 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_53190 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:18700250-18700295
64251 chr1 15970122 15970122 1 + A C UCEC 15970118 + 15970098 15970138 41 TTGCCAAAGGAGTGGGCACCCAGAAGATTATTGGAAGGGTA TTGCCAAAGGAGTGGGCACCCAGACGATTATTGGAAGGGTA < 41bp 0.89060638168317 0.580766197189052 0.73370457 0.6285772 prediction 0.619680368988235 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15970118 chr1:15970122 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_53195 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:15970096-15970123
64251 chr17 80708496 80708496 1 + G T UCEC 80708494 + 80708474 80708514 41 CCTTCTTCACCGCCTACCACCGGAAGATCCCCAAGGCTCCG CCTTCTTCACCGCCTACCACCGTAAGATCCCCAAGGCTCCG < 41bp 0.809790893436879 0.489412571239219 0.911868 0.5287577 prediction 0.619581786873758 Functional Loss - FN3K ENSG00000167363 CDS Human protein_coding chr17:80708494 chr17:80708496 synonymous SNV . 0 23 hm5C_associated_SNPs_53196 0 0 7 CSTF2T POSTAR2 ENCODE chr17:80708464-80708543
64251 chr12 50492748 50492748 1 + G T UCEC 50492745 + 50492725 50492765 41 CTTAGGTGCAGCAGAGACGACAAGAATTAGAGCAAGCCCTG CTTAGGTGCAGCAGAGACGACAATAATTAGAGCAAGCCCTG < 41bp 0.809766971943073 0.454547333504528 0.7837502 0.86117905 prediction 0.619533943886145 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50492745 chr12:50492748 stopgain 1.000 1 24 hm5C_associated_SNPs_53200 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:50492733-50492771
64251 chr5 35659183 35659183 1 + G T LUAD 35659180 + 35659160 35659200 41 CGGCAGTCCCAGCAGGAGCGCAGGATTGCCGTGCAGCTCAT CGGCAGTCCCAGCAGGAGCGCAGTATTGCCGTGCAGCTCAT < 41bp 0.865193776862537 0.555475734139903 0.8456657 0.28666955 prediction 0.619436085445267 Functional Loss - SPEF2 ENSG00000152582 CDS Human protein_coding chr5:35659180 chr5:35659183 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53206 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:35659179-35659198
64251 chr7 148876178 148876178 1 + G T LUAD 148876176 + 148876156 148876196 41 CCCACCTGCCCACACTGTGCCAGGACTTTTACTCACCCATC CCCACCTGCCCACACTGTGCCATGACTTTTACTCACCCATC < 41bp 0.809686195060826 0.491541281464143 0.8274586 0.14678228 prediction 0.619372390121652 Functional Loss - ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876176 chr7:148876178 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_53209 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:148876172-148876199
64251 chr11 63994371 63994371 1 + G T HNSC 63994368 + 63994348 63994388 41 GGCCACAGCTGCTCCTGCGCCTGGGCCTTACTTCCTACCGA GGCCACAGCTGCTCCTGCGCCTGTGCCTTACTTCCTACCGA < 41bp 0.885590097258402 0.575930164816039 0.7081573 0.18596119 prediction 0.619319864884726 Functional Loss - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994368 chr11:63994371 nonsynonymous SNV 0.774 4 24 hm5C_associated_SNPs_53210 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr7 150768232 150768232 1 + G T LUSC 150768230 + 150768210 150768250 41 GCCATCAACGCCTTCCTGGACTGCAGCGTGGTGCTGCCGCC GCCATCAACGCCTTCCTGGACTTCAGCGTGGTGCTGCCGCC < 41bp 0.809621340835056 0.489758982079347 0.20198312 0.06922901 prediction 0.619242681670112 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150768230 chr7:150768232 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_53215 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr7:150768210-150768232
64251 chr14 67843242 67843242 1 + G T UCEC 67843239 + 67843219 67843259 41 AGCCTATTCCAGAGGACTGCCTGGGTCTTTGATGACAAGTA AGCCTATTCCAGAGGACTGCCTGTGTCTTTGATGACAAGTA < 41bp 0.809620441158221 0.446947015596029 0.3352461 0.038978547 prediction 0.619240882316441 Functional Loss - EIF2S1 ENSG00000134001 CDS Human protein_coding chr14:67843239 chr14:67843242 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53216 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:67843191-67843243
64251 chr7 27832703 27832703 1 + G T LUAD 27832700 + 27832680 27832720 41 TCTAGGACAAGACTGATACACTGGAACACGAACTAAGAAGA TCTAGGACAAGACTGATACACTGTAACACGAACTAAGAAGA < 41bp 0.839659075535432 0.530046028895797 0.69701624 0.17737705 prediction 0.61922609327927 Functional Loss - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27832700 chr7:27832703 stopgain 0.991 1 24 hm5C_associated_SNPs_53219 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr7:27832684-27832713
64251 chr12 14577453 14577453 1 + G T rs201516379 14577451 + 14577431 14577471 41 CACTGCTGATGATCTCTCCTCTGGTGATCCCACCTCTAGTG CACTGCTGATGATCTCTCCTCTTGTGATCCCACCTCTAGTG < 41bp 0.816025442569582 0.506431373815927 0.4095241 0.084671825 prediction 0.619188137507311 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577451 chr12:14577453 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_53222 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14577351-14577468
64251 chr6 130378584 130378584 1 + G T LUSC 130378582 + 130378562 130378602 41 AAAGGAAAGAAAGCGTGGTGCTGGGCATCCTACCTGGAAGA AAAGGAAAGAAAGCGTGGTGCTTGGCATCCTACCTGGAAGA < 41bp 0.809590972160101 0.485218074039609 0.4613045 0.1948564 prediction 0.619181944320202 Functional Loss - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130378582 chr6:130378584 nonsynonymous SNV 0.994 5 23 hm5C_associated_SNPs_53223 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:130378576-130378598
64251 chr20 3804698 3804698 1 + G T ESCA 3804695 + 3804675 3804715 41 GTGGTGTGGCTGGGCGTGCTCTCGTTAGGCTTTGCCCTGGT GTGGTGTGGCTGGGCGTGCTCTCTTTAGGCTTTGCCCTGGT < 41bp 0.809567588654777 0.438587681832152 0.30257803 0.29618704 prediction 0.619135177309555 Functional Loss - AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3804695 chr20:3804698 synonymous SNV . 0 24 hm5C_associated_SNPs_53226 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr20:3804671-3804698
64251 chr13 113803407 113803407 1 + G T LUSC 113803405 + 113803385 113803425 41 GCCTGCCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGAT GCCTGCCTCCCCGAGCGTGACTTGGCCGAGTCCACGCTGAT < 41bp 0.809557606355417 0.487701697266022 0.86976016 0.3290804 prediction 0.619115212710833 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803405 chr13:113803407 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_53227 0 0 4 RPS3 POSTAR2 ENCODE chr13:113803360-113803415
64251 chr16 8735041 8735041 1 + G T STAD 8735039 + 8735019 8735059 41 GCTGAAGGACGACCTCTGCACAGGTGTGTGTTTCTCTCGGA GCTGAAGGACGACCTCTGCACATGTGTGTGTTTCTCTCGGA < 41bp 0.830113112165043 0.520563807722272 0.73143846 0.22093946 prediction 0.619098608885543 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735039 chr16:8735041 nonsynonymous SNV 0.969 4 23 hm5C_associated_SNPs_53232 0 0 19 BUD13 POSTAR2 ENCODE chr16:8735004-8735058
64251 chr2 73446061 73446061 1 + G T HNSC 73446059 + 73446039 73446079 41 CGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATG CGTAGAACGGCCCCTGGTGGCTTCACAGTTTCTCTGGAATG < 41bp 0.816619826703932 0.50710113275137 0.2935686 0.21481761 prediction 0.619037387905124 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73446059 chr2:73446061 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_53235 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:73446054-73446075
64251 chr12 57850385 57850385 1 + G T UCEC 57850382 + 57850362 57850402 41 CGGGACTGGATACTGCAGCCCGAGGGGTACCAGCTGAATTA CGGGACTGGATACTGCAGCCCGATGGGTACCAGCTGAATTA < 41bp 0.809515692740004 0.428094498820869 0.8828058 0.42047894 prediction 0.619031385480008 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850382 chr12:57850385 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_53236 0 0 3 DROSHA POSTAR2 ENCODE chr12:57850358-57850416
64251 chr19 6750343 6750343 1 + G T BLCA 6750341 + 6750321 6750361 41 GAAAGTCGAGTCCTTAGCAACCGGGGAGACAGCCTGAGCCG GAAAGTCGAGTCCTTAGCAACCTGGGAGACAGCCTGAGCCG < 41bp 0.838229618605719 0.528723346123364 0.9131447 0.41958487 prediction 0.619012544964711 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750341 chr19:6750343 nonsynonymous SNV 0.699 3 23 hm5C_associated_SNPs_53238 0 0 4 DDX24 POSTAR2 ENCODE chr19:6750301-6750362
64251 chrX 56590825 56590825 1 + G T UCEC 56590823 + 56590803 56590843 41 AGCTCCAGAGCCAGATGCAGCAGCAGCTTATGGCCAGCCCT AGCTCCAGAGCCAGATGCAGCATCAGCTTATGGCCAGCCCT < 41bp 0.825415033298061 0.515909938446398 0.19243413 0.025915325 prediction 0.619010189703325 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590823 chrX:56590825 nonsynonymous SNV 0.876 1 23 hm5C_associated_SNPs_53239 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:56590820-56590840
64251 chr4 128565128 128565128 1 + G T SKCM 128565125 + 128565105 128565145 41 CAAGTGGAGCTGGAGAAGAACCGGAAAGCAGGGTGATGGAG CAAGTGGAGCTGGAGAAGAACCGTAAAGCAGGGTGATGGAG < 41bp 0.809494551374467 0.445910581789128 0.8873876 0.34716344 prediction 0.618989102748934 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128565125 chr4:128565128 nonsynonymous SNV 0.062 0 24 hm5C_associated_SNPs_53240 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:128565102-128565129
64251 chr1 109440160 109440160 1 + G T SKCM 109440157 + 109440137 109440177 41 AAGCGAAAGCTAGTGGTAATCTGGGAAACACCTTAAAAGTT AAGCGAAAGCTAGTGGTAATCTGTGAAACACCTTAAAAGTT < 41bp 0.864746114352486 0.55525832530603 0.8910565 0.3619517 prediction 0.618975578092913 Functional Loss - GPSM2 ENSG00000121957 CDS Human protein_coding chr1:109440157 chr1:109440160 stopgain 1.000 1 24 hm5C_associated_SNPs_53241 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:109440147-109440168
64251 chr8 22876322 22876322 1 + A C rs10088466 22876318 + 22876298 22876338 41 TCAGGGAAAGGGGCACTGACCTGTAGTGAAAGGCCACAGGA TCAGGGAAAGGGGCACTGACCTGTCGTGAAAGGCCACAGGA < 41bp 0.809471701735664 0.442167776069701 0.32119215 0.23421171 prediction 0.618943403471327 Functional Loss - RHOBTB2 ENSG00000245025 ncRNA_intronic Human antisense chr8:22876318 chr8:22876322 . . 0 25 hm5C_associated_SNPs_53245 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22876303-22876325
64251 chr7 27194314 27194314 1 - C A rs17472084 27194317 - 27194297 27194337 41 GGACTGAGCGGCCGCAGAGACTGGGTCGCCTTGGATTCCCT GGACTGAGCGGCCGCAGAGACTGTGTCGCCTTGGATTCCCT < 41bp 0.841799648943033 0.532340012086329 0.81676555 0.11667335 prediction 0.618919273713408 Functional Loss - HOXA-AS3 ENSG00000254369 ncRNA_exonic Human antisense chr7:27194317 chr7:27194314 . . 0 24 hm5C_associated_SNPs_53247 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:27194293-27194329
64251 chr11 64085785 64085785 1 + A C rs7938623 64085781 + 64085761 64085801 41 CTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGG CTGCGGCAGCGGCAGCAAGACGGTCCAGTGAAGGAGAGTGG < 41bp 0.809458209202345 0.453144594491111 0.22486356 0.3257162 prediction 0.61891641840469 Functional Loss - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085781 chr11:64085785 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_53248 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:64085780-64085800
64251 chrX 102841679 102841679 1 + G T UCEC 102841676 + 102841656 102841696 41 TGGAAAATGAAGAACAGCCACAAGACGAGAGAAAGCCAGAA TGGAAAATGAAGAACAGCCACAATACGAGAGAAAGCCAGAA < 41bp 0.809411219156678 0.47051367753396 0.7712424 0.3282752 prediction 0.618822438313356 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841676 chrX:102841679 nonsynonymous SNV 0.971 1 24 hm5C_associated_SNPs_53253 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:102841595-102841690
64251 chr7 48141467 48141467 1 + G T HNSC 48141465 + 48141445 48141485 41 TCCCGGATGAAAGCCTTCATCAGGTGCGTTGGTGCAGAGCT TCCCGGATGAAAGCCTTCATCATGTGCGTTGGTGCAGAGCT < 41bp 0.827087706256787 0.517678024132597 0.9233594 0.7657943 prediction 0.618819364248379 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48141465 chr7:48141467 nonsynonymous SNV 0.173 1 23 hm5C_associated_SNPs_53254 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr7:48141451-48141472
64251 chr17 7162107 7162107 1 + G T COAD 7162104 + 7162084 7162124 41 TGGGGGTGGGGTCAGGGATTCTAGGGATGGGGCAGAGTGGC TGGGGGTGGGGTCAGGGATTCTATGGATGGGGCAGAGTGGC < 41bp 0.809361013283441 0.444185088715793 0.8913591 0.57999706 prediction 0.618722026566883 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162104 chr17:7162107 stoploss 0.000 0 24 hm5C_associated_SNPs_53256 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:7162094-7162118
64251 chr6 35254147 35254147 1 + G T LUSC 35254145 + 35254125 35254165 41 CCTGTGCAGCTGGAAGATGGCAGCATGGCTTACATACACCG CCTGTGCAGCTGGAAGATGGCATCATGGCTTACATACACCG < 41bp 0.809349410558272 0.496834852878491 0.28823066 0.17252237 prediction 0.618698821116544 Functional Loss - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35254145 chr6:35254147 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53257 0 0 3 BUD13 POSTAR2 ENCODE chr6:35254115-35254177
64251 chr8 28574968 28574968 1 + G T LUSC 28574966 + 28574946 28574986 41 TCGGTGCCGTCCCGGTGGTGCTGGGGGAGCAGGTCCAGCTT TCGGTGCCGTCCCGGTGGTGCTTGGGGAGCAGGTCCAGCTT < 41bp 0.80933221839059 0.489722420318324 0.8702728 0.7186027 prediction 0.61866443678118 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574966 chr8:28574968 synonymous SNV . 0 23 hm5C_associated_SNPs_53258 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574933-28574975
64251 chr9 120474795 120474795 1 + A C PRAD 120474791 + 120474771 120474811 41 TTTCTGGACTATCAAGTTTACAGAAGCTGGTGGCTGTGGAG TTTCTGGACTATCAAGTTTACAGACGCTGGTGGCTGTGGAG < 41bp 0.809308370035675 0.450033275798167 0.26605627 0.33129716 prediction 0.61861674007135 Functional Loss - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120474791 chr9:120474795 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_53262 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr9:120474780-120474800
64251 chr12 57971529 57971529 1 + G T UCEC 57971527 + 57971507 57971547 41 AGCGACATGAGCAGTCCAAGCAGGACCTCAAGGGTCTGGAG AGCGACATGAGCAGTCCAAGCATGACCTCAAGGGTCTGGAG < 41bp 0.841102344692193 0.531797302286413 0.7792884 0.18331942 prediction 0.61861008481156 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57971527 chr12:57971529 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53264 0 0 1 ZNF622 POSTAR2 ENCODE chr12:57971501-57971533
64251 chr13 115090647 115090647 1 + G T LUAD 115090645 + 115090625 115090665 41 TCCAGAGCTCAGAAAACCCTCAGGGTCACCAGATCTTTGGA TCCAGAGCTCAGAAAACCCTCATGGTCACCAGATCTTTGGA < 41bp 0.809282918412064 0.483873302598513 0.912488 0.43022048 prediction 0.618565836824128 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090645 chr13:115090647 nonsynonymous SNV 0.964 2 23 hm5C_associated_SNPs_53267 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr13:115090617-115090649
64251 chr7 55229240 55229240 1 + G T ESCA 55229238 + 55229218 55229258 41 TTGTGCTCCCCCGAGGGCTGCTGGGGCCCGGAGCCCAGGGA TTGTGCTCCCCCGAGGGCTGCTTGGGCCCGGAGCCCAGGGA < 41bp 0.809282552613669 0.482743969688769 0.90051734 0.54744434 prediction 0.618565105227338 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55229238 chr7:55229240 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_53268 0 0 1 SND1 POSTAR2 ENCODE chr7:55229185-55229271
64251 chr2 174228038 174228038 1 + G T SARC 174228036 + 174228016 174228056 41 CAGGGTGGCGATGAAGTTTCCAGCGCGGAGTACCAGGGGAG CAGGGTGGCGATGAAGTTTCCATCGCGGAGTACCAGGGGAG < 41bp 0.835434808738467 0.526171082577039 0.6393727 0.40931106 prediction 0.618527452322854 Functional Loss - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174228036 chr2:174228038 nonsynonymous SNV 0.155 0 23 hm5C_associated_SNPs_53269 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:174228020-174228040
64251 chr7 141352593 141352593 1 + G T UCEC 141352591 + 141352571 141352611 41 ATTCTCTTCTCCCCAGGGAGCAGGGGGCTCTTTTAGCATTG ATTCTCTTCTCCCCAGGGAGCATGGGGCTCTTTTAGCATTG < 41bp 0.80923714954259 0.489200423317895 0.9115528 0.44890383 prediction 0.618474299085179 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141352591 chr7:141352593 nonsynonymous SNV 0.657 1 23 hm5C_associated_SNPs_53272 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:141352576-141352622
64251 chr10 89469006 89469006 1 + G T UCEC 89469003 + 89468983 89469023 41 TATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGCAAGT TATCAGGCCCACCATGTGAGCAGTAATAAGAGAGGGCAAGT < 41bp 0.871444345485908 0.562225751080134 0.8956371 0.38033062 prediction 0.618437188811549 Functional Loss - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89469003 chr10:89469006 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53273 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:89468986-89469023
64251 chr9 35733119 35733119 1 + G T UCEC 35733116 + 35733096 35733136 41 ACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATGGAT ACCACACCTACTCCCTCCCACGGTAAACTGTCTCTATGGAT < 41bp 0.809197511065649 0.430984358498588 0.3165849 0.02597341 prediction 0.618395022131298 Functional Loss - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733116 chr9:35733119 stopgain 0.017 0 24 hm5C_associated_SNPs_53274 0 0 2 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr14 31142521 31142521 1 + G T COAD 31142518 + 31142498 31142538 41 AACTAGAATCTTACAGAGCACAGGAAGATGAGGTCAAACGA AACTAGAATCTTACAGAGCACAGTAAGATGAGGTCAAACGA < 41bp 0.809192246319491 0.462933311485392 0.4834195 0.20441088 prediction 0.618384492638981 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31142518 chr14:31142521 stopgain 0.997 1 24 hm5C_associated_SNPs_53275 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:31142501-31142532
64251 chr17 7155834 7155834 1 + G T CESC 7155832 + 7155812 7155852 41 ACACTGGGTCATGACGCCATCAGAGGGCGCCAGAGCAGGGA ACACTGGGTCATGACGCCATCATAGGGCGCCAGAGCAGGGA < 41bp 0.831777103082624 0.522637579412663 0.9051442 0.4977892 prediction 0.618279047339922 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7155832 chr17:7155834 stopgain 0.024 0 23 hm5C_associated_SNPs_53280 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr17:7155803-7155834
64251 chr22 39917987 39917987 1 + G T LGG 39917985 + 39917965 39918005 41 GAACCCAATTGGCCATCTCCCAGAAAGTTTAACAAAACCCG GAACCCAATTGGCCATCTCCCATAAAGTTTAACAAAACCCG < 41bp 0.80912325233167 0.490929233585271 0.15117618 0.023933798 prediction 0.61824650466334 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917985 chr22:39917987 stopgain 1.000 0 23 hm5C_associated_SNPs_53283 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39917794-39917992
64251 chr12 68043620 68043620 1 + G T LUAD 68043617 + 68043597 68043637 41 GTTCGTCAGCTTCAGGCTTCCCCGGGGCTCGGTGCAGGGGC GTTCGTCAGCTTCAGGCTTCCCCTGGGCTCGGTGCAGGGGC < 41bp 0.866215909666166 0.557098642540195 0.42825067 0.07199991 prediction 0.618234534251941 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68043617 chr12:68043620 synonymous SNV . 0 24 hm5C_associated_SNPs_53284 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:68043609-68043627
64251 chr10 5948185 5948185 1 + G T OV 5948182 + 5948162 5948202 41 GCAGTGCAGGGCCGGGCTCACCAGGGTCTGCCCCGCCCTCC GCAGTGCAGGGCCGGGCTCACCATGGTCTGCCCCGCCCTCC < 41bp 0.889122589727718 0.580010960226297 0.92947614 0.8680292 prediction 0.618223259002843 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948182 chr10:5948185 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_53285 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:5948158-5948185
64251 chr18 2909794 2909794 1 + G T LIHC 2909792 + 2909772 2909812 41 AACAAAGTGCTGGTGAACGACGGGGATGTTTACAACCCCAG AACAAAGTGCTGGTGAACGACGTGGATGTTTACAACCCCAG < 41bp 0.836810551861844 0.527699255692493 0.7528955 0.2573315 prediction 0.618222592338702 Functional Loss - EMILIN2 ENSG00000132205 CDS Human protein_coding chr18:2909792 chr18:2909794 nonsynonymous SNV 0.509 4 23 hm5C_associated_SNPs_53286 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:2909774-2909802
64251 chr14 77572118 77572118 1 + G T UCEC 77572116 + 77572096 77572136 41 TGCCAAAGTAGGCAAAGGCACAGAGATGAAGAAAGTGGCTC TGCCAAAGTAGGCAAAGGCACATAGATGAAGAAAGTGGCTC < 41bp 0.809087556470855 0.479848121934094 0.6660027 0.20444393 prediction 0.618175112941709 Functional Loss - CIPC ENSG00000198894;ENSG00000259164 CDS Human other chr14:77572116 chr14:77572118 stopgain 0.996 0 23 hm5C_associated_SNPs_53287 0 0 2 GRWD1 POSTAR2 ENCODE chr14:77572015-77572187
64251 chr12 7045930 7045930 1 + G T KIRC 7045928 + 7045908 7045948 41 AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCACGGAAAC AGCAGCAGCAGCAGCAGCAGCATCAGCAGCATCACGGAAAC < 41bp 0.828902593809171 0.519817713784564 0.82914346 0.34676248 prediction 0.618169760049214 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045928 chr12:7045930 nonsynonymous SNV 0.077 1 23 hm5C_associated_SNPs_53288 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:7045920-7045940
64251 chr12 2929369 2929369 1 + A C STAD 2929365 + 2929345 2929385 41 TGACAGGGCAGCTGGTGTCCCTCAAGAAATGGATGCTGGAG TGACAGGGCAGCTGGTGTCCCTCACGAAATGGATGCTGGAG < 41bp 0.809076547254315 0.389245987256744 0.2023746 0.043607533 prediction 0.618153094508629 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2929365 chr12:2929369 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_53290 0 0 8 BUD13 POSTAR2 ENCODE chr12:2929333-2929399
64251 chr10 99504558 99504558 1 + G T LUAD 99504556 + 99504536 99504576 41 GGCTACCTTCAGGAGGTTTGCCGGGCACGGCTGCCTGATTC GGCTACCTTCAGGAGGTTTGCCTGGCACGGCTGCCTGATTC < 41bp 0.809061969185483 0.491708968787951 0.91836596 0.7417645 prediction 0.618123938370966 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99504556 chr10:99504558 nonsynonymous SNV 0.949 1 23 hm5C_associated_SNPs_53292 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr10:99504540-99504560
64251 chr17 8159678 8159678 1 + G T UCEC 8159676 + 8159656 8159696 41 TTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAAC TTGAGTCCATCATGAGCACCCATGAATCCTCGAACCCCAAC < 41bp 0.809055063420982 0.484161339180724 0.35611832 0.045232207 prediction 0.618110126841964 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8159676 chr17:8159678 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_53293 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:8159652-8159719
64251 chr21 45222344 45222344 1 + G T rs75527225 45222342 + 45222322 45222362 41 CTCCCCTGGATGGGGGTCACCTGCAGTGTCTCCCCCTGAAG CTCCCCTGGATGGGGGTCACCTTCAGTGTCTCCCCCTGAAG < 41bp 0.809031810377903 0.499168100237932 0.8838418 0.4928116 prediction 0.618063620755807 Functional Loss - RRP1 ENSG00000160214 intronic Human protein_coding chr21:45222342 chr21:45222344 . . 0 23 hm5C_associated_SNPs_53295 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr21:45222320-45222360
64251 chr11 94861753 94861753 1 + G T UCEC 94861751 + 94861731 94861771 41 CCCCAATGACTCAGTCCTTCCAGGAACGGTGGTATGTGAAT CCCCAATGACTCAGTCCTTCCATGAACGGTGGTATGTGAAT < 41bp 0.820708818091013 0.5116832960479 0.83995837 0.3301301 prediction 0.618051044086226 Functional Loss - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94861751 chr11:94861753 nonsynonymous SNV 0.794 0 23 hm5C_associated_SNPs_53296 0 0 1 YBX3 POSTAR2 ENCODE chr11:94861753-94861824
64251 chr10 6262674 6262674 1 + G T LUAD 6262672 + 6262652 6262692 41 GGCCGGAGGTTCCTGGTGAACCGGGTGCAGGACCACATCCA GGCCGGAGGTTCCTGGTGAACCTGGTGCAGGACCACATCCA < 41bp 0.808898992937103 0.480027350304979 0.8759029 0.21386194 prediction 0.617797985874206 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6262672 chr10:6262674 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_53309 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr10:6262669-6262691
64251 chr10 121431869 121431869 1 + G T LUAD 121431866 + 121431846 121431886 41 TGGGCAGTCACCAGCTCCCGCGGGGGTACATCTCCATTCCG TGGGCAGTCACCAGCTCCCGCGGTGGTACATCTCCATTCCG < 41bp 0.892537612093014 0.583640750273847 0.90411466 0.50944483 prediction 0.617793723638335 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121431866 chr10:121431869 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_53310 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:121431865-121431896
64251 chr4 174169303 174169303 1 + G T LUAD 174169300 + 174169280 174169320 41 AAATGAACAAGAGCACCATGCTGGAGGAGATTCCCAGAAAG AAATGAACAAGAGCACCATGCTGTAGGAGATTCCCAGAAAG < 41bp 0.808881962462867 0.470588411126469 0.23285711 0.095746666 prediction 0.617763924925733 Functional Loss - GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174169300 chr4:174169303 nonsynonymous SNV 0.910 0 24 hm5C_associated_SNPs_53311 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:174169287-174169325
64251 chr11 64811948 64811948 1 + G T LUAD 64811945 + 64811925 64811965 41 CCAAGGGCCAGACCTTGCCTCTGGGCTTCATGGTCAACCTC CCAAGGGCCAGACCTTGCCTCTGTGCTTCATGGTCAACCTC < 41bp 0.808874703490888 0.437357281153812 0.30185246 0.022486001 prediction 0.617749406981777 Functional Loss - SAC3D1 ENSG00000168061 CDS Human protein_coding chr11:64811945 chr11:64811948 nonsynonymous SNV 0.233 2 24 hm5C_associated_SNPs_53313 0 0 1 RBM15 POSTAR2 ENCODE chr11:64811916-64811976
64251 chr12 2930940 2930940 1 + G T UCEC 2930938 + 2930918 2930958 41 TGGATCACCAGCTCTTTGCCCTGGAGAAACTGGATGTCACC TGGATCACCAGCTCTTTGCCCTTGAGAAACTGGATGTCACC < 41bp 0.829553484024149 0.520731343670003 0.25903648 0.055042446 prediction 0.617644280708293 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930938 chr12:2930940 synonymous SNV . 0 23 hm5C_associated_SNPs_53318 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:2930932-2930966
64251 chr19 10398775 10398775 1 + G T SARC 10398772 + 10398752 10398792 41 AGTGCCTAGCTATGAAGTCCCAGGCGTAAAGGGGGATGTTC AGTGCCTAGCTATGAAGTCCCAGTCGTAAAGGGGGATGTTC < 41bp 0.808819354994491 0.439529100253588 0.81974113 0.07489219 prediction 0.617638709988982 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398772 chr19:10398775 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_53319 0 0 1 UPF1 POSTAR2 ENCODE chr19:10398744-10398817
64251 chr2 85823723 85823723 1 + G T BLCA 85823720 + 85823700 85823740 41 CACCTGCCTCCACCAGCTGCCAAGACTGTGGTTGAGAACCT CACCTGCCTCCACCAGCTGCCAATACTGTGGTTGAGAACCT < 41bp 0.808814702802538 0.455482625463453 0.25018936 0.17464206 prediction 0.617629405605077 Functional Loss - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85823720 chr2:85823723 nonsynonymous SNV 0.885 4 24 hm5C_associated_SNPs_53321 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:85823705-85823726
64251 chr4 1316262 1316262 1 + G T UCEC 1316259 + 1316239 1316279 41 CCACCTGCCTGGCCTGGTGCCATGACAACAAGTCCCGGCTC CCACCTGCCTGGCCTGGTGCCATTACAACAAGTCCCGGCTC < 41bp 0.808810514703233 0.441926734247798 0.3914647 0.38337165 prediction 0.617621029406465 Functional Loss - MAEA ENSG00000090316 CDS Human protein_coding chr4:1316259 chr4:1316262 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_53322 0 0 5 PPIG POSTAR2 ENCODE chr4:1316177-1316325
64251 chr5 7878172 7878172 1 + G T LIHC 7878170 + 7878150 7878190 41 CGCACTCCCGGTGGCATCACCTGCATCCTCGAGGACAGACC CGCACTCCCGGTGGCATCACCTTCATCCTCGAGGACAGACC < 41bp 0.811723079408023 0.502914065871492 0.37403664 0.1684491 prediction 0.617618027073062 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7878170 chr5:7878172 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_53323 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:7878144-7878187
64251 chr6 158449952 158449952 1 + G T LUSC 158449950 + 158449930 158449970 41 TTTGAAGAAAATCCTCAGCTCGGGGGTGTTCTATTTCTCAT TTTGAAGAAAATCCTCAGCTCGTGGGTGTTCTATTTCTCAT < 41bp 0.81290656146716 0.504172406738272 0.92913014 0.72878635 prediction 0.617468309457776 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158449950 chr6:158449952 nonsynonymous SNV 0.378 4 23 hm5C_associated_SNPs_53335 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr6:158449948-158449974
64251 chr15 41104925 41104925 1 + G T UCEC 41104923 + 41104903 41104943 41 CTCTCCAGAATGATCTCAACCAGGGTGGCCCAGGGAGCACT CTCTCCAGAATGATCTCAACCATGGTGGCCCAGGGAGCACT < 41bp 0.83839606252296 0.529688127775265 0.93438554 0.8639619 prediction 0.61741586949539 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41104923 chr15:41104925 nonsynonymous SNV 0.391 1 23 hm5C_associated_SNPs_53338 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41104914-41104935
64251 chr2 160585652 160585652 1 + G T SARC 160585649 + 160585629 160585669 41 TTTAAATGATACCTATCACTCAAGAGACTCTTCATTTAGAT TTTAAATGATACCTATCACTCAATAGACTCTTCATTTAGAT < 41bp 0.808695828988364 0.480235901674563 0.24100208 0.095047235 prediction 0.617391657976728 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160585649 chr2:160585652 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_53339 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:160585527-160585685
64251 chr1 193218898 193218898 1 + G T LUSC 193218895 + 193218875 193218915 41 TGAAGTATGATGAAGTTCGTCTGGATCCAAATGTTCAGAAA TGAAGTATGATGAAGTTCGTCTGTATCCAAATGTTCAGAAA < 41bp 0.845966142346104 0.537279595916923 0.2590088 0.08114523 prediction 0.617373092858362 Functional Loss - CDC73 ENSG00000134371 CDS Human protein_coding chr1:193218895 chr1:193218898 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_53341 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:193218881-193218902
64251 chr19 31038967 31038967 1 + G T COAD 31038964 + 31038944 31038984 41 GAACGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAG GAACGGGGCTGGGCCGCTGTCTGTGCAACCCCCAAATCAAG < 41bp 0.808675279178357 0.427643864484925 0.84201163 0.13359025 prediction 0.617350558356714 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31038964 chr19:31038967 nonsynonymous SNV 0.214 2 24 hm5C_associated_SNPs_53343 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:31038956-31038967
64251 chr19 31038966 31038966 1 + G T LIHC 31038964 + 31038944 31038984 41 GAACGGGGCTGGGCCGCTGTCTGGGCAACCCCCAAATCAAG GAACGGGGCTGGGCCGCTGTCTTGGCAACCCCCAAATCAAG < 41bp 0.808675279178357 0.470759727343668 0.84201163 0.14976239 prediction 0.617350558356714 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31038964 chr19:31038966 nonsynonymous SNV 0.217 4 23 hm5C_associated_SNPs_53344 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:31038956-31038967
64251 chr2 27887266 27887266 1 + G T COAD 27887264 + 27887244 27887284 41 TACCACGCAGTGCTGCAGCACAGGGCGTCCGGCCCTGACGG TACCACGCAGTGCTGCAGCACATGGCGTCCGGCCCTGACGG < 41bp 0.853127168438105 0.544486405173926 0.9049229 0.46955043 prediction 0.617281526528358 Functional Loss - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27887264 chr2:27887266 nonsynonymous SNV 0.876 5 23 hm5C_associated_SNPs_53347 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:27887232-27887270
64251 chr1 24078495 24078495 1 + G T UCEC 24078492 + 24078472 24078512 41 AACCAAGTCAGAGAAGCCGGCTGGAGCTGATTTAGCCAAGC AACCAAGTCAGAGAAGCCGGCTGTAGCTGATTTAGCCAAGC < 41bp 0.808625158971548 0.451687988564967 0.5721414 0.2990694 prediction 0.617250317943096 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24078492 chr1:24078495 nonsynonymous SNV 0.790 0 24 hm5C_associated_SNPs_53351 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:24078487-24078511
64251 chr22 45929773 45929773 1 + G T OV 45929771 + 45929751 45929791 41 GAGCTCACAGAGGACAATAGCTGCAAAGGTACAGCATGCGC GAGCTCACAGAGGACAATAGCTTCAAAGGTACAGCATGCGC < 41bp 0.816360394350026 0.507743376060814 0.18205285 0.06842634 prediction 0.617234036578425 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45929771 chr22:45929773 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_53352 0 0 1 PRPF8 POSTAR2 ENCODE chr22:45929769-45929817
64251 chr5 137802882 137802882 1 + G T UCEC 137802879 + 137802859 137802899 41 CCTGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCCCGA CCTGCCGCCAAGGGTGGCTTCCATGTTCCCATGATCCCCGA < 41bp 0.808602812777094 0.438554937499265 0.44261295 0.2205917 prediction 0.617205625554187 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137802879 chr5:137802882 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53353 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137802860-137802900
64251 chr20 23345335 23345335 1 + G T LIHC 23345333 + 23345313 23345353 41 AGGTACAGGTGGAAGAAGATCGGGTGCAGCGAATGCTGGAA AGGTACAGGTGGAAGAAGATCGTGTGCAGCGAATGCTGGAA < 41bp 0.808602614922317 0.489830014274791 0.8380494 0.26238018 prediction 0.617205229844633 Functional Loss - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345333 chr20:23345335 synonymous SNV . 0 23 hm5C_associated_SNPs_53354 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:23345288-23345351
64251 chr2 113674783 113674783 1 + G T SARC 113674781 + 113674761 113674801 41 CAAAGTACTGGTCCTGGACTCTGGGAATCTCATAGCAGTTC CAAAGTACTGGTCCTGGACTCTTGGAATCTCATAGCAGTTC < 41bp 0.808577876961413 0.498479406785803 0.3469732 0.18205065 prediction 0.617155753922825 Functional Loss - IL37 ENSG00000125571 CDS Human protein_coding chr2:113674781 chr2:113674783 nonsynonymous SNV 0.000 3 23 hm5C_associated_SNPs_53361 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:113674763-113674796
64251 chr18 8783635 8783635 1 + G T UCEC 8783633 + 8783613 8783653 41 GGGAGAAGGACGAGCTGGAGCAGGAGCTCCAGAAGTACAAG GGGAGAAGGACGAGCTGGAGCATGAGCTCCAGAAGTACAAG < 41bp 0.833666145879018 0.525089332618982 0.9108078 0.5772258 prediction 0.617153626520073 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8783633 chr18:8783635 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_53362 0 0 1 BUD13 POSTAR2 ENCODE chr18:8783590-8783641
64251 chr8 123964290 123964290 1 + G T STAD 123964287 + 123964267 123964307 41 GGTGACAGTGATTCTGGGATCTCGGTGAGTAAAACCCCCAT GGTGACAGTGATTCTGGGATCTCTGTGAGTAAAACCCCCAT < 41bp 0.867204756714318 0.558640034847361 0.82265806 0.72390187 prediction 0.617129443733912 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964287 chr8:123964290 synonymous SNV . 0 24 hm5C_associated_SNPs_53364 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:123964259-123964297
64251 chr18 29099836 29099836 1 + G T LUAD 29099834 + 29099814 29099854 41 TTAGTGCGGCAAAAGCGCGCCTGGATCACCGCCCCCGTGGC TTAGTGCGGCAAAAGCGCGCCTTGATCACCGCCCCCGTGGC < 41bp 0.830050644474015 0.521491404797331 0.3204605 0.020359606 prediction 0.617118479353369 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29099834 chr18:29099836 nonsynonymous SNV 0.944 3 23 hm5C_associated_SNPs_53365 1 0 2 FUS POSTAR2 DRA001158,DRS012384 chr18:29099811-29099860
64251 chr10 70748989 70748989 1 + G T THYM 70748987 + 70748967 70749007 41 AGGTACCGGCTCTCGCACGACTGCATCTCTCTCTGCATCCA AGGTACCGGCTCTCGCACGACTTCATCTCTCTCTGCATCCA < 41bp 0.809608141551928 0.501051338049729 0.28037786 0.11985764 prediction 0.617113607004397 Functional Loss - KIF1BP ENSG00000198954 CDS Human protein_coding chr10:70748987 chr10:70748989 nonsynonymous SNV 0.956 1 23 hm5C_associated_SNPs_53366 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:70748969-70749001
64251 chr17 40721269 40721269 1 + G T SARC 40721267 + 40721247 40721287 41 TCGTCCCCACTTGCCAGCAGCAGGACTTCTCCATTGGCTCC TCGTCCCCACTTGCCAGCAGCATGACTTCTCCATTGGCTCC < 41bp 0.842619026784218 0.534063475587735 0.33707836 0.035582393 prediction 0.617111102392964 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40721267 chr17:40721269 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_53368 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:40721267-40721287
64251 chr11 10483264 10483264 1 + G T COAD 10483262 + 10483242 10483282 41 TGCAGAAGGAGCTGGCAGAGCAGAAGTCTGTGGAGACCGCA TGCAGAAGGAGCTGGCAGAGCATAAGTCTGTGGAGACCGCA < 41bp 0.827367150354716 0.518823664405298 0.39390305 0.2336238 prediction 0.617086971898835 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10483262 chr11:10483264 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_53369 0 0 2 UCHL5 POSTAR2 ENCODE chr11:10483213-10483283
64251 chr2 74329241 74329241 1 + G T SARC 74329239 + 74329219 74329259 41 ACTGGCTGTGCCCACAGACTCGGCGGTCACCGTGTCCTCCT ACTGGCTGTGCCCACAGACTCGTCGGTCACCGTGTCCTCCT < 41bp 0.813324860631728 0.504781774067151 0.9287944 0.2587602 prediction 0.617086173129153 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74329239 chr2:74329241 nonsynonymous SNV 0.901 0 23 hm5C_associated_SNPs_53370 0 0 2 FXR2 POSTAR2 ENCODE chr2:74329208-74329290
64251 chr11 124496861 124496861 1 + G T LUSC 124496859 + 124496839 124496879 41 ATCTACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAG ATCTACCCCGTGGGCTATTGCATTACTCGAATATATGCCAG < 41bp 0.808539517226372 0.490691563977557 0.48083478 0.12730855 prediction 0.617079034452744 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124496859 chr11:124496861 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_53371 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:124496842-124496865
64251 chr19 50191469 50191469 1 + G T STAD 50191466 + 50191446 50191486 41 GACTTCAAGGGCCAGCTGTGCGAGCTGTCCTGCTCCACCGA GACTTCAAGGGCCAGCTGTGCGATCTGTCCTGCTCCACCGA < 41bp 0.808522381335441 0.429395781298694 0.5027338 0.17756546 prediction 0.617044762670881 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50191466 chr19:50191469 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_53373 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:50191418-50191471
64251 chr10 13151272 13151272 1 + G T BLCA 13151269 + 13151249 13151289 41 CAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAGG CAGATGAAAGAGCTCCTGACCGATAACCACCAGCTGAAAGG < 41bp 0.875466225849043 0.566955118073031 0.8998939 0.40457648 prediction 0.617022215552024 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13151269 chr10:13151272 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_53375 0 0 2 PRPF8 POSTAR2 ENCODE chr10:13151265-13151329
64251 chr1 223949949 223949949 1 + G T LUAD 223949946 + 223949926 223949966 41 GAGACTGTTTGCCCAGTTGGCAGGAGAGGTAAATGTTCCCA GAGACTGTTTGCCCAGTTGGCAGTAGAGGTAAATGTTCCCA < 41bp 0.875206139549848 0.566697637983684 0.8895416 0.28319776 prediction 0.617017003132328 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223949946 chr1:223949949 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_53376 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:223949919-223949951
64251 chr15 40765115 40765115 1 + A C rs186655194 40765111 + 40765091 40765131 41 GCAGGGTTCTTGCCTGGTAGCTCCAGGACCCAGCTCTGCAG GCAGGGTTCTTGCCTGGTAGCTCCCGGACCCAGCTCTGCAG < 41bp 0.808506966824018 0.462869147943915 0.93741405 0.08949843 prediction 0.617013933648036 Functional Loss - CHST14 ENSG00000169105 UTR3 Human protein_coding chr15:40765111 chr15:40765115 . . 0 25 hm5C_associated_SNPs_53377 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:40765076-40765129
64251 chr5 134002578 134002578 1 + G T STAD 134002575 + 134002555 134002595 41 CTTTTCAACCAGGAGCTCCTCATGGGCCCCCTCCAGCTGGA CTTTTCAACCAGGAGCTCCTCATTGGCCCCCTCCAGCTGGA < 41bp 0.808483842293602 0.432340355380428 0.2967729 0.049610138 prediction 0.616967684587204 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134002575 chr5:134002578 nonsynonymous SNV 0.842 3 24 hm5C_associated_SNPs_53381 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:134002547-134002579
64251 chr8 23429211 23429211 1 + G T ACC 23429209 + 23429189 23429229 41 TCGGGTATGGCCAATGCCTTCCGGACGGTGTACCAGCTCAA TCGGGTATGGCCAATGCCTTCCTGACGGTGTACCAGCTCAA < 41bp 0.808436897074199 0.49430641162032 0.8537886 0.09738645 prediction 0.616873794148398 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429209 chr8:23429211 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_53384 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr1 25667039 25667039 1 + A C UCEC 25667035 + 25667015 25667055 41 GCATTGACTGGGGGGAAAAGCGCAATACTATTGCTTCCATT GCATTGACTGGGGGGAAAAGCGCACTACTATTGCTTCCATT < 41bp 0.887283340598459 0.578888105493274 0.7738138 0.533071 prediction 0.616790470210371 Functional Loss - TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25667035 chr1:25667039 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_53388 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:25667009-25667045
64251 chr9 114688752 114688752 1 + G T LGG 114688750 + 114688730 114688770 41 TGCCTTACGTAGCAGACAGACAGGGCTTTGCTGCCACCTTA TGCCTTACGTAGCAGACAGACATGGCTTTGCTGCCACCTTA < 41bp 0.813965227866718 0.5056017455073 0.9085876 0.38604558 prediction 0.616726964718836 Functional Loss - UGCG ENSG00000148154 CDS Human protein_coding chr9:114688750 chr9:114688752 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_53390 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:114688739-114688765
64251 chr10 7839118 7839118 1 + G T SARC 7839115 + 7839095 7839135 41 TGAGAGAGAGCTGAAACCAGCTCGAATATATGGATTGGGAT TGAGAGAGAGCTGAAACCAGCTCTAATATATGGATTGGGAT < 41bp 0.858291363792631 0.549932458575131 0.20061848 0.62135947 prediction 0.616717810435 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7839115 chr10:7839118 nonsynonymous SNV 0.517 4 24 hm5C_associated_SNPs_53391 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:7839062-7839119
64251 chr10 89692896 89692896 1 + G T UCEC 89692893 + 89692873 89692913 41 TGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTG TGCAGCAATTCACTGTAAAGCTGTAAAGGGACGAACTGGTG < 41bp 0.845189458436964 0.536832497003737 0.108899236 0.06594059 prediction 0.616713922866455 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89692893 chr10:89692896 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_53392 1 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:89692878-89692922
64251 chr8 144103160 144103160 1 + G T LUAD 144103158 + 144103138 144103178 41 AGCGTCACCCTGCTGGGTGCCGGGCTGCTGCTGAGCCTGCT AGCGTCACCCTGCTGGGTGCCGTGCTGCTGCTGAGCCTGCT < 41bp 0.816011386425615 0.507692866920577 0.8861309 0.25129262 prediction 0.616637039010075 Functional Loss - LY6E ENSG00000160932 CDS Human protein_coding chr8:144103158 chr8:144103160 nonsynonymous SNV 0.266 3 23 hm5C_associated_SNPs_53396 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:144103154-144103194
64251 chr17 21081599 21081599 1 + A C rs115536974 21081595 + 21081575 21081615 41 GCTAAACTGGTGCTCTGTGGCCGGAATGGTGGGGCCCTAGA GCTAAACTGGTGCTCTGTGGCCGGCATGGTGGGGCCCTAGA < 41bp 0.892605206639205 0.584334638095074 0.8165546 0.6784701 prediction 0.616541137088262 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21081595 chr17:21081599 nonsynonymous SNV 0.716 2 25 hm5C_associated_SNPs_53401 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:21081578-21081611
64251 chr11 70049581 70049581 1 + G T STAD 70049578 + 70049558 70049598 41 ACCCCGCCATGGACCCGTTCCTGGTGCTGCTGCACTCGGTG ACCCCGCCATGGACCCGTTCCTGTTGCTGCTGCACTCGGTG < 41bp 0.808263660819819 0.44357319205969 0.81719416 0.32409206 prediction 0.616527321639639 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049578 chr11:70049581 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_53402 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:70049579-70049598
64251 chr6 4892238 4892238 1 + G T LUAD 4892235 + 4892215 4892255 41 CACTCGTGATTGGGAAAGACCACGAATCCAAAAACAGCCAG CACTCGTGATTGGGAAAGACCACTAATCCAAAAACAGCCAG < 41bp 0.846861069442559 0.5386252940092 0.39640096 0.6829114 prediction 0.616471550866718 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892235 chr6:4892238 stopgain 0.996 0 24 hm5C_associated_SNPs_53404 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:4892221-4892242
64251 chr9 128094293 128094293 1 + G T LIHC 128094290 + 128094270 128094310 41 ACATCTGATGATACGGATGTCAGGGAGGTCAGTTCCCGCCC ACATCTGATGATACGGATGTCAGTGAGGTCAGTTCCCGCCC < 41bp 0.872002882890065 0.563770011268257 0.9020808 0.40851656 prediction 0.616465743243616 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128094290 chr9:128094293 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53405 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr9:128094276-128094301
64251 chr2 73450605 73450605 1 + G T UCEC 73450603 + 73450583 73450623 41 ACACTCTGGAGTTGAAGCCTCAGGACCGTGAGCAGCTTGAC ACACTCTGGAGTTGAAGCCTCATGACCGTGAGCAGCTTGAC < 41bp 0.832081080229509 0.523850275524626 0.603546 0.08792734 prediction 0.616461609409765 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73450603 chr2:73450605 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_53406 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:73450577-73450606
64251 chr5 78586049 78586049 1 + G T UCEC 78586046 + 78586026 78586066 41 ACATGGCTGTACTGTCTATTCAAGATCTTACTGTCAAGTAC ACATGGCTGTACTGTCTATTCAATATCTTACTGTCAAGTAC < 41bp 0.808223133934917 0.447357963584656 0.16596508 0.05903235 prediction 0.616446267869834 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78586046 chr5:78586049 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_53409 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr5:78586015-78586070
64251 chr12 57850274 57850274 1 + G T LUAD 57850271 + 57850251 57850291 41 GCCAATGAGCCTGGAGCAGGCCGGGCCAGGAGGAGGACCCC GCCAATGAGCCTGGAGCAGGCCGTGCCAGGAGGAGGACCCC < 41bp 0.808215921565309 0.434652168445596 0.83066756 0.33892226 prediction 0.616431843130619 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850271 chr12:57850274 synonymous SNV . 0 24 hm5C_associated_SNPs_53410 0 0 2 SND1 POSTAR2 ENCODE chr12:57850205-57850294
64251 chr4 184931510 184931510 1 + G T ESCA 184931507 + 184931487 184931527 41 GCCCTCTGGGTGCTTCTTCTCTAGGGACGCCGGAAGACCTT GCCCTCTGGGTGCTTCTTCTCTATGGACGCCGGAAGACCTT < 41bp 0.808210816634899 0.434149918173628 0.9294826 0.41301885 prediction 0.616421633269799 Functional Loss - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184931507 chr4:184931510 nonsynonymous SNV 0.731 4 24 hm5C_associated_SNPs_53412 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr4:184931500-184931520
64251 chr19 54080530 54080530 1 + G T UCEC 54080527 + 54080507 54080547 41 TCAGCACCAGAGATTCCACACTGGGGAGAAAGACTACGAAT TCAGCACCAGAGATTCCACACTGTGGAGAAAGACTACGAAT < 41bp 0.808204885382597 0.44334645236222 0.6540259 0.2369754 prediction 0.616409770765193 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080527 chr19:54080530 nonsynonymous SNV 0.697 3 24 hm5C_associated_SNPs_53413 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:54080526-54080557
64251 chr19 39423175 39423175 1 + G T rs35977895 39423173 + 39423153 39423193 41 ATCGCAAGTGCTGTCGAGTGCGGCTCAGCACTGGCCGCGAG ATCGCAAGTGCTGTCGAGTGCGTCTCAGCACTGGCCGCGAG < 41bp 0.814628132764765 0.506457965051632 0.23434141 0.038938254 prediction 0.616340335426265 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423173 chr19:39423175 synonymous SNV . 0 23 hm5C_associated_SNPs_53416 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39423158-39423181
64251 chr15 38591588 38591588 1 + G T LUAD 38591585 + 38591565 38591605 41 CTATTTTAGTAATAGTTATGCACGAGTGCGAGCTGTGGTGA CTATTTTAGTAATAGTTATGCACTAGTGCGAGCTGTGGTGA < 41bp 0.808163732219891 0.46364249610013 0.15850607 0.06845629 prediction 0.616327464439783 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591585 chr15:38591588 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53417 0 0 2 DDX3X POSTAR2 ENCODE chr15:38591581-38591677
64251 chr13 113803701 113803701 1 + A C COAD 113803697 + 113803677 113803717 41 GCTGGGGAGAGGGCTGTGCCCGTAAGGGGAAGTACGGGATC GCTGGGGAGAGGGCTGTGCCCGTACGGGGAAGTACGGGATC < 41bp 0.884368865613754 0.576217277393294 0.34390146 0.23528233 prediction 0.61630317644092 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803697 chr13:113803701 nonsynonymous SNV 0.790 3 25 hm5C_associated_SNPs_53418 0 0 6 DDX55 POSTAR2 ENCODE chr13:113803657-113803725
64251 chr10 104160088 104160088 1 + G T STAD 104160086 + 104160066 104160106 41 AGACGAGTGTGGTGAGCTTTCTGCTGCGGGTAGGTGCAGAC AGACGAGTGTGGTGAGCTTTCTTCTGCGGGTAGGTGCAGAC < 41bp 0.818834655710506 0.510703994212886 0.58099437 0.47660756 prediction 0.616261322995241 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104160086 chr10:104160088 synonymous SNV . 0 23 hm5C_associated_SNPs_53422 0 0 3 EFTUD2 POSTAR2 ENCODE chr10:104160081-104160114
64251 chr16 67914984 67914984 1 + G T UCEC 67914982 + 67914962 67915002 41 TTGGCCTGTCCTCCCAGCCCCAGGAATGGCCTTCAGGAAAA TTGGCCTGTCCTCCCAGCCCCATGAATGGCCTTCAGGAAAA < 41bp 0.830398782983516 0.522279000526585 0.8694807 0.14879155 prediction 0.616239564913862 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914982 chr16:67914984 nonsynonymous SNV 0.964 4 23 hm5C_associated_SNPs_53423 0 0 3 DDX24 POSTAR2 ENCODE chr16:67914983-67914989
64251 chr11 60689262 60689262 1 + G T UCEC 60689260 + 60689240 60689280 41 TTCCAGGTGATTACCTCGCCCAGGGCCTGAAGCTCAGCCCT TTCCAGGTGATTACCTCGCCCATGGCCTGAAGCTCAGCCCT < 41bp 0.84005464520344 0.531947257740078 0.9089128 0.5535193 prediction 0.616214774926723 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689260 chr11:60689262 nonsynonymous SNV 0.964 0 23 hm5C_associated_SNPs_53425 0 0 5 RPS3 POSTAR2 ENCODE chr11:60689245-60689274
64251 chr15 92663743 92663743 1 + G T ESCA 92663741 + 92663721 92663761 41 CTCTCAAACCCTGTGTTCACCTGCATCATCCTGGCCGCCTG CTCTCAAACCCTGTGTTCACCTTCATCATCCTGGCCGCCTG < 41bp 0.808101089427706 0.493327224255756 0.261218 0.09803522 prediction 0.616202178855412 Functional Loss - SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92663741 chr15:92663743 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53428 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr15:92663720-92663753
64251 chr10 135165921 135165921 1 + G T UCEC 135165918 + 135165898 135165938 41 TCCTGGGACCGGAGGAAGACCAAGACCACATCTACCACCCC TCCTGGGACCGGAGGAAGACCAATACCACATCTACCACCCC < 41bp 0.875871085152186 0.56777517465872 0.8887929 0.88088024 prediction 0.616191820986932 Functional Loss - PRAP1 ENSG00000165828;ENSG00000198546 CDS Human other chr10:135165918 chr10:135165921 nonsynonymous SNV 0.217 3 24 hm5C_associated_SNPs_53430 0 0 3 LARP4 POSTAR2 ENCODE chr10:135165888-135166049
64251 chrX 65392314 65392314 1 + G T LUSC 65392311 + 65392291 65392331 41 GATGAAGTGGCCCAGCCTGCCTGGTTGGGCTTCCTGGGGCC GATGAAGTGGCCCAGCCTGCCTGTTTGGGCTTCCTGGGGCC < 41bp 0.808027825454258 0.430023351632663 0.20921445 0.060056716 prediction 0.616055650908516 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65392311 chrX:65392314 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53435 0 0 2 BUD13 POSTAR2 ENCODE chrX:65392292-65392361
64251 chr7 141478657 141478657 1 + G T LUAD 141478655 + 141478635 141478675 41 CAGTGTTTCTCCTGCTGAAGCGGAATATCTCCCCAAAGATC CAGTGTTTCTCCTGCTGAAGCGTAATATCTCCCCAAAGATC < 41bp 0.80800497493303 0.498452000000929 0.7236756 0.083599 prediction 0.616009949866059 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478655 chr7:141478657 synonymous SNV . 0 23 hm5C_associated_SNPs_53438 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:141478639-141478660
64251 chr11 70189796 70189796 1 + G T SARC 70189793 + 70189773 70189813 41 AGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAG AGGTACAAACTCTTAATGAGCAGTATTGGGAACGTGCCCAG < 41bp 0.86903534306699 0.561051126562611 0.7218791 0.2847457 prediction 0.615968433008758 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70189793 chr11:70189796 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_53440 0 0 14 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:70189772-70189810
64251 chr16 2134391 2134391 1 + G T CESC 2134388 + 2134368 2134408 41 TGAGCAAGTCCAGCTCCTCTCCCGAGCTGCAGACTCTGCAG TGAGCAAGTCCAGCTCCTCTCCCTAGCTGCAGACTCTGCAG < 41bp 0.867574442497521 0.559613570396399 0.80130565 0.23678884 prediction 0.615921744202244 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2134388 chr16:2134391 stopgain 0.857 1 24 hm5C_associated_SNPs_53442 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2134361-2134391
64251 chr19 1271175 1271175 1 + G T LUSC 1271172 + 1271152 1271192 41 AGACAGGGAGACCCAGAGATCTCGGGGATTTGGGTTTGTCA AGACAGGGAGACCCAGAGATCTCTGGGATTTGGGTTTGTCA < 41bp 0.807906574390133 0.432759722337101 0.87983 0.5551995 prediction 0.615813148780266 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271172 chr19:1271175 nonsynonymous SNV 0.962 3 24 hm5C_associated_SNPs_53448 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:1271149-1271225
64251 chr12 53671697 53671697 1 + G T UCEC 53671695 + 53671675 53671715 41 TGTACGGTGTCTCCAGCAGACAGCAGCCTCACTGCAGATCC TGTACGGTGTCTCCAGCAGACATCAGCCTCACTGCAGATCC < 41bp 0.807901962711268 0.486388410240443 0.107575834 0.08064297 prediction 0.615803925422537 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53671695 chr12:53671697 nonsynonymous SNV 0.959 1 23 hm5C_associated_SNPs_53449 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:53671690-53671714
64251 chr1 43316820 43316820 1 + G T COAD 43316818 + 43316798 43316838 41 CCATGGCAGAAAGTCACTGTCCGGGCTCGAGAGCTAGGGGA CCATGGCAGAAAGTCACTGTCCTGGCTCGAGAGCTAGGGGA < 41bp 0.807898086225425 0.493998317844366 0.8613847 0.1837089 prediction 0.61579617245085 Functional Loss - ZNF691 ENSG00000164011 CDS Human protein_coding chr1:43316818 chr1:43316820 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_53451 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:43316807-43316825
64251 chr4 110757269 110757269 1 + A T LUAD 110757265 + 110757245 110757285 41 CATAGGGTGGGCTAGTTATGCCCCAGATCCTACTGGTGCTA CATAGGGTGGGCTAGTTATGCCCCTGATCCTACTGGTGCTA < 41bp 0.807877288127843 0.492423453652076 0.3398255 0.21368092 prediction 0.615754576255686 Functional Loss - RRH ENSG00000180245 CDS Human protein_coding chr4:110757265 chr4:110757269 synonymous SNV . 0 25 hm5C_associated_SNPs_53452 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:110757260-110757285
64251 chr2 241516383 241516383 1 + G T COAD 241516380 + 241516360 241516400 41 GACTACTATCCTGACCTCCACAGGGTGCGGCGCTTCCTGGA GACTACTATCCTGACCTCCACAGTGTGCGGCGCTTCCTGGA < 41bp 0.807864291529148 0.426359372125183 0.85596585 0.14124006 prediction 0.615728583058295 Functional Loss - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241516380 chr2:241516383 nonsynonymous SNV 0.793 0 24 hm5C_associated_SNPs_53454 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:241516356-241516391
64251 chr5 139574220 139574220 1 + A C STAD 139574216 + 139574196 139574236 41 ACGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAAACCACA ACGGCTGGCAGGGTGGACCTCAGGCGCCTCCTAAAACCACA < 41bp 0.868399955708751 0.560545126599867 0.8290022 0.79881763 prediction 0.615709658217768 Functional Loss - CYSTM1 ENSG00000120306 CDS Human protein_coding chr5:139574216 chr5:139574220 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_53455 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:139574181-139574227
64251 chr11 66272098 66272098 1 + G T LUSC 66272096 + 66272076 66272116 41 CTCACAGGTGCTGAAGTCCACAGGGGATGTGGCCGGAGGGC CTCACAGGTGCTGAAGTCCACATGGGATGTGGCCGGAGGGC < 41bp 0.842549405142782 0.534738577900462 0.9300786 0.39226288 prediction 0.61562165448464 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66272096 chr11:66272098 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_53462 0 0 1 RPS3 POSTAR2 ENCODE chr11:66272082-66272163
64251 chr19 10940880 10940880 1 + G T STAD 10940877 + 10940857 10940897 41 AGCAGTGAGGGGCCCCACTCCAGGGCCCCCCCTGATTCCTG AGCAGTGAGGGGCCCCACTCCAGTGCCCCCCCTGATTCCTG < 41bp 0.807787619910186 0.448571026310954 0.8496469 0.12569654 prediction 0.615575239820371 Functional Loss - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940877 chr19:10940880 nonsynonymous SNV 0.916 5 24 hm5C_associated_SNPs_53466 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10940876-10940897
64251 chr2 198570478 198570478 1 + G T UCEC 198570475 + 198570455 198570495 41 CCCCGACCGAGCTGTGCGACCGAGTCTCTGAGCAGTTCCAG CCCCGACCGAGCTGTGCGACCGATTCTCTGAGCAGTTCCAG < 41bp 0.80774490752316 0.445002320083193 0.56748843 0.17368007 prediction 0.615489815046319 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570475 chr2:198570478 nonsynonymous SNV 0.974 3 24 hm5C_associated_SNPs_53470 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:198570462-198570487
64251 chrX 154348284 154348284 1 + G T COAD 154348281 + 154348261 154348301 41 TTTCCTATTGAAGTGTTTACCAAGAATCTGTGCAGTCAGAT TTTCCTATTGAAGTGTTTACCAATAATCTGTGCAGTCAGAT < 41bp 0.807734086171036 0.451459404869741 0.7284901 0.31170356 prediction 0.615468172342073 Functional Loss - BRCC3 ENSG00000185515 CDS Human protein_coding chrX:154348281 chrX:154348284 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53472 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:154348278-154348341
64251 chr19 10385519 10385519 1 + G T LUSC 10385517 + 10385497 10385537 41 GGCTCCGTGCTGGTGACATGCAGCACCTCCTGTGACCAGCC GGCTCCGTGCTGGTGACATGCATCACCTCCTGTGACCAGCC < 41bp 0.830023402805483 0.522307541494169 0.21231282 0.10778877 prediction 0.615431722622628 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10385517 chr19:10385519 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_53475 0 0 3 RPS3 POSTAR2 ENCODE chr19:10385467-10385521
64251 chr16 3459073 3459073 1 + A C rs532323899 3459069 + 3459049 3459089 41 CATTCTGCTGTGAGGAGGCCCAGAAAAGGCCAACCAGGGCC CATTCTGCTGTGAGGAGGCCCAGACAAGGCCAACCAGGGCC < 41bp 0.868277218397955 0.560585478555517 0.2355206 0.123622715 prediction 0.615383479684877 Functional Loss - ZNF174 ENSG00000103343 UTR3 Human protein_coding chr16:3459069 chr16:3459073 . . 0 25 hm5C_associated_SNPs_53478 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3459039-3459073
64251 chr7 155538188 155538188 1 + G T THYM 155538186 + 155538166 155538206 41 CGTCCATCCAGGGCCGGCCCCAGGACACAAAGCCTGGCGTG CGTCCATCCAGGGCCGGCCCCATGACACAAAGCCTGGCGTG < 41bp 0.807670635210681 0.486381112404762 0.92186165 0.8763796 prediction 0.615341270421362 Functional Loss - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155538186 chr7:155538188 nonsynonymous SNV 0.946 2 23 hm5C_associated_SNPs_53479 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:155538188-155538189
64251 chr19 36273671 36273671 1 + G T LUSC 36273668 + 36273648 36273688 41 CTGCTCCCACCCCCAGGACCCTGGAGTACCTGCTGAGGCAC CTGCTCCCACCCCCAGGACCCTGTAGTACCTGCTGAGGCAC < 41bp 0.880031220243058 0.572371062136964 0.45199925 0.05361992 prediction 0.615320316212187 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36273668 chr19:36273671 stopgain 0.998 1 24 hm5C_associated_SNPs_53481 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:36273660-36273680
64251 chr11 129993624 129993624 1 + G T SKCM 129993622 + 129993602 129993642 41 TATGGTGGCTGCGGCGGCAACAGGAACAATTTTGAGTCTGA TATGGTGGCTGCGGCGGCAACATGAACAATTTTGAGTCTGA < 41bp 0.807656788094082 0.498253198837655 0.64251024 0.26301706 prediction 0.615313576188165 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129993622 chr11:129993624 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53482 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:129993590-129993673
64251 chr3 16343209 16343209 1 + G T UCEC 16343206 + 16343186 16343226 41 CCCTCAGCCTGCGGATGCCTCTAGAAACCTCGTGTTGATTG CCCTCAGCCTGCGGATGCCTCTATAAACCTCGTGTTGATTG < 41bp 0.869919581492724 0.562268292290739 0.34461892 0.20479888 prediction 0.615302578403971 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343206 chr3:16343209 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_53483 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:16343157-16343222
64251 chr21 46387078 46387078 1 + G T rs2294168 46387076 + 46387056 46387096 41 CTGCTGGGGCTCGAGGCTGGCAGCCGGCGCCAAGCCCGCAG CTGCTGGGGCTCGAGGCTGGCATCCGGCGCCAAGCCCGCAG < 41bp 0.828891086791386 0.521256345010328 0.7385279 0.4125307 prediction 0.615269483562116 Functional Loss - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46387076 chr21:46387078 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_53486 0 0 6 DDX55 POSTAR2 ENCODE chr21:46387002-46387097
64251 chr21 47985676 47985676 1 + G T UCEC 47985673 + 47985653 47985693 41 ACCGGGTACTACACCGTTTACGGGGAGGAGGCGCTTCATGC ACCGGGTACTACACCGTTTACGGTGAGGAGGCGCTTCATGC < 41bp 0.807630393184535 0.450900468485249 0.88680863 0.47124434 prediction 0.61526078636907 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47985673 chr21:47985676 synonymous SNV . 0 24 hm5C_associated_SNPs_53487 0 0 2 EIF3H POSTAR2 ENCODE chr21:47985623-47985695
64251 chr19 3527734 3527734 1 + G T LIHC 3527732 + 3527712 3527752 41 AGGACGACTTCTACCTCAATCTGGTGGACTGGTCGTCCCTC AGGACGACTTCTACCTCAATCTTGTGGACTGGTCGTCCCTC < 41bp 0.827033034698038 0.51942953289716 0.5638547 0.30055487 prediction 0.615207003601755 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3527732 chr19:3527734 synonymous SNV . 0 23 hm5C_associated_SNPs_53491 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3527710-3527734
64251 chr12 71833953 71833953 1 + G T SKCM 71833951 + 71833931 71833971 41 CTCCCAGGTCTGGTGTGTTGCTGAGGGGCTGCCCCACACAC CTCCCAGGTCTGGTGTGTTGCTTAGGGGCTGCCCCACACAC < 41bp 0.838655227290489 0.531119183707563 0.18764955 0.042360574 prediction 0.615072087165852 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71833951 chr12:71833953 synonymous SNV . 0 23 hm5C_associated_SNPs_53501 0 0 1 DDX3X POSTAR2 ENCODE chr12:71833938-71833985
64251 chr16 1412863 1412863 1 + A C READ 1412859 + 1412839 1412879 41 TCTCAAAGGAGATCAAAAGGCTGAAAGGTTTGCTCACCCAG TCTCAAAGGAGATCAAAAGGCTGACAGGTTTGCTCACCCAG < 41bp 0.807535937157146 0.411768300198902 0.16502875 0.09230614 prediction 0.615071874314293 Functional Loss - GNPTG ENSG00000090581 CDS Human protein_coding chr16:1412859 chr16:1412863 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_53502 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:1412833-1412867
64251 chrX 102864443 102864443 1 + G T CESC 102864440 + 102864420 102864460 41 GTGGAGATGTGTCAAGGGCTCAAGAGGAGCTAAGGAAAAAA GTGGAGATGTGTCAAGGGCTCAATAGGAGCTAAGGAAAAAA < 41bp 0.807523275152657 0.441305464395067 0.8437356 0.09022477 prediction 0.615046550305314 Functional Loss - TCEAL3 ENSG00000196507 CDS Human protein_coding chrX:102864440 chrX:102864443 stopgain 0.987 0 24 hm5C_associated_SNPs_53504 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:102864406-102864443
64251 chr1 117559956 117559956 1 + G T LUAD 117559953 + 117559933 117559973 41 ACAAGGCTGGAGAAAATGGACTGGGCCACCTTCCAGCTGGA ACAAGGCTGGAGAAAATGGACTGTGCCACCTTCCAGCTGGA < 41bp 0.80747189026676 0.424123394520183 0.80632544 0.21759492 prediction 0.614943780533521 Functional Loss - CD101 ENSG00000134256 CDS Human protein_coding chr1:117559953 chr1:117559956 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53507 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:117559946-117559984
64251 chr6 170627007 170627007 1 + G T LUAD 170627004 + 170626984 170627024 41 AGCATAACTGTCTTGGGATTCTGGGGGAAGACACTGATTAC AGCATAACTGTCTTGGGATTCTGTGGGAAGACACTGATTAC < 41bp 0.807433491123589 0.445409859246832 0.9002253 0.43216598 prediction 0.614866982247179 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627004 chr6:170627007 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_53513 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:170626959-170627021
64251 chr12 110353309 110353309 1 + G T UCEC 110353307 + 110353287 110353327 41 AGCTCTCAGATGCCCTGCTGCAGCAGGAGGCGGAGACTATG AGCTCTCAGATGCCCTGCTGCATCAGGAGGCGGAGACTATG < 41bp 0.807427787565258 0.484549452905601 0.85660434 0.23246655 prediction 0.614855575130517 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110353307 chr12:110353309 nonsynonymous SNV 0.989 2 23 hm5C_associated_SNPs_53514 0 0 8 BUD13 POSTAR2 ENCODE chr12:110353208-110353327
64251 chr18 8824940 8824940 1 + G T LUAD 8824937 + 8824917 8824957 41 GAGGTGGGGCGGGCAGGGCACGAGGACAGCACAGAGCCTTT GAGGTGGGGCGGGCAGGGCACGATGACAGCACAGAGCCTTT < 41bp 0.807417567663273 0.438159222781947 0.9036647 0.34895867 prediction 0.614835135326546 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8824937 chr18:8824940 nonsynonymous SNV 0.038 0 24 hm5C_associated_SNPs_53517 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr18:8824940-8824960
64251 chr2 61118917 61118917 1 + G T ESCA 61118914 + 61118894 61118934 41 GCGATCAGCAGGCAGCATTCCAGGGGAGCACAGCACAGACA GCGATCAGCAGGCAGCATTCCAGTGGAGCACAGCACAGACA < 41bp 0.866568552934034 0.559153604065329 0.9315147 0.32706222 prediction 0.614829897737411 Functional Loss - REL ENSG00000162924 CDS Human protein_coding chr2:61118914 chr2:61118917 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_53518 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:61118889-61118919
64251 chr19 572596 572596 1 + A C rs28915406 572592 + 572572 572612 41 ATAGCGGCCGCGGGCGGCGGCGGCAGCGGTTGGAGGTTGTA ATAGCGGCCGCGGGCGGCGGCGGCCGCGGTTGGAGGTTGTA < 41bp 0.807394224745167 0.475779799963356 0.91675663 0.90607953 prediction 0.614788449490333 Functional Loss - BSG ENSG00000172270 UTR5 Human protein_coding chr19:572592 chr19:572596 . . 0 25 hm5C_associated_SNPs_53519 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:572560-572680
64251 chr5 149216164 149216164 1 + G T LUAD 149216162 + 149216142 149216182 41 GCTGAGGTCCTGGGAGCCGTCTGGGGTTCACCTTGAGGACT GCTGAGGTCCTGGGAGCCGTCTTGGGTTCACCTTGAGGACT < 41bp 0.807387278832643 0.477770687146027 0.8599777 0.29271227 prediction 0.614774557665286 Functional Loss - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149216162 chr5:149216164 nonsynonymous SNV 0.236 3 23 hm5C_associated_SNPs_53522 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149216137-149216168
64251 chrX 134655025 134655025 1 + G T UCEC 134655022 + 134655002 134655042 41 AAAGGCGCTGTGGAGTTATTCTTGAAGGTAAAGGGAGGGGA AAAGGCGCTGTGGAGTTATTCTTTAAGGTAAAGGGAGGGGA < 41bp 0.807376162150528 0.45839217625609 0.07932192 0.016502112 prediction 0.614752324301057 Functional Loss - INTS6L ENSG00000165359 CDS Human protein_coding chrX:134655022 chrX:134655025 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53523 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chrX:134655020-134655040
64251 chr12 105514362 105514362 1 + G T UCEC 105514359 + 105514339 105514379 41 ACCCAAAATTATAGAGACAACTGGAGTTCATTTTCAGGTAA ACCCAAAATTATAGAGACAACTGTAGTTCATTTTCAGGTAA < 41bp 0.824388204675291 0.517019995799063 0.17962343 0.069779426 prediction 0.614736417752456 Functional Loss - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105514359 chr12:105514362 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53524 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:105514326-105514364
64251 chr6 133138113 133138113 1 + G T UCEC 133138110 + 133138090 133138130 41 TCCCAATAGGTTGATGACAACAAGAAACTAGGAGAATGGGT TCCCAATAGGTTGATGACAACAATAAACTAGGAGAATGGGT < 41bp 0.813634077972381 0.506278437536277 0.42110682 0.09585923 prediction 0.614711280872208 Functional Loss - RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138110 chr6:133138113 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53525 0 0 41 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:133138094-133138115
64251 chr22 21988325 21988325 1 + G T UCEC 21988322 + 21988302 21988342 41 TCTGCTCAGGTGCAGCTGCCCAAGAAGCCACTGGTCCCAGA TCTGCTCAGGTGCAGCTGCCCAATAAGCCACTGGTCCCAGA < 41bp 0.879112086010221 0.571756693123339 0.8585615 0.334475 prediction 0.614710785773763 Functional Loss - CCDC116 ENSG00000161180 CDS Human protein_coding chr22:21988322 chr22:21988325 nonsynonymous SNV 0.141 3 24 hm5C_associated_SNPs_53526 0 0 1 BUD13 POSTAR2 ENCODE chr22:21988254-21988357
64251 chr9 104170255 104170255 1 + G T UCEC 104170252 + 104170232 104170272 41 ATGAGGAGCCAACTGTAAAACAAGAGATTGAAGAAATTGAG ATGAGGAGCCAACTGTAAAACAATAGATTGAAGAAATTGAG < 41bp 0.850132533174921 0.542777720307604 0.2768671 0.13677484 prediction 0.614709625734635 Functional Loss - ZNF189 ENSG00000136870 CDS Human protein_coding chr9:104170252 chr9:104170255 stopgain 1.000 1 24 hm5C_associated_SNPs_53527 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:104170202-104170288
64251 chr11 308304 308304 1 + G T STAD 308302 + 308282 308322 41 GCTGGGGGTGCCCCACAACCCTGCTCCCCCGATGTCCACCG GCTGGGGGTGCCCCACAACCCTTCTCCCCCGATGTCCACCG < 41bp 0.807344829629273 0.482005639654106 0.16159505 0.07698968 prediction 0.614689659258546 Functional Loss - IFITM2 ENSG00000185201 CDS Human protein_coding chr11:308302 chr11:308304 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_53529 0 0 3 DDX3X POSTAR2 ENCODE chr11:308144-308360
64251 chr19 46027374 46027374 1 + G T GBM 46027371 + 46027351 46027391 41 CCAGAATCTGTGCGGAGACCCTGGGAGAAGAACAGCACAAC CCAGAATCTGTGCGGAGACCCTGTGAGAAGAACAGCACAAC < 41bp 0.807342663134333 0.424984328977303 0.67517287 0.08752331 prediction 0.614685326268666 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46027371 chr19:46027374 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53530 0 0 12 BUD13 POSTAR2 ENCODE chr19:46027320-46027397
64251 chr5 80074609 80074609 1 + G T LUAD 80074606 + 80074586 80074626 41 ACAGACATCTGAATCAGCTCCGGGAGCAGCTAGTCCTTGAC ACAGACATCTGAATCAGCTCCGGTAGCAGCTAGTCCTTGAC < 41bp 0.807328854522973 0.449358376068737 0.8655151 0.27254057 prediction 0.614657709045946 Functional Loss - MSH3 ENSG00000113318 CDS Human protein_coding chr5:80074606 chr5:80074609 stopgain 0.999 1 24 hm5C_associated_SNPs_53533 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:80074584-80074612
64251 chr3 141162049 141162049 1 + G T GBM 141162047 + 141162027 141162067 41 CAAAGACATTCTCCATACCACAGGATTCGGATTCAGCCACA CAAAGACATTCTCCATACCACATGATTCGGATTCAGCCACA < 41bp 0.807295158283022 0.498788990036025 0.8907473 0.15202239 prediction 0.614590316566044 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141162047 chr3:141162049 nonsynonymous SNV 0.622 2 23 hm5C_associated_SNPs_53537 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr3:141162018-141162049
64251 chr6 41898440 41898440 1 + G T THCA 41898438 + 41898418 41898458 41 ATCATCCCTGCACTCTCCAACTGGGAGCAAATCCTCTACGT ATCATCCCTGCACTCTCCAACTTGGAGCAAATCCTCTACGT < 41bp 0.829916819468609 0.522628395407858 0.9307454 0.13661748 prediction 0.614576848121501 Functional Loss - BYSL ENSG00000112578 CDS Human protein_coding chr6:41898438 chr6:41898440 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_53539 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:41898409-41898449
64251 chr1 109772147 109772147 1 + G T THYM 109772144 + 109772124 109772164 41 CAGAGCGGTTTGAGAACCTCCGAGAGATTGGGAACCTTCTG CAGAGCGGTTTGAGAACCTCCGATAGATTGGGAACCTTCTG < 41bp 0.85587929904325 0.548607717529032 0.883205 0.13907999 prediction 0.614543163028436 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109772144 chr1:109772147 stopgain 0.988 1 24 hm5C_associated_SNPs_53545 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109772049-109772181
64251 chr1 1565032 1565032 1 + G T LUAD 1565029 + 1565009 1565049 41 CTCTTCGCAGAGTGCGCGCGCAGGATGAAGAAGTGCATCAG CTCTTCGCAGAGTGCGCGCGCAGTATGAAGAAGTGCATCAG < 41bp 0.860763265832425 0.553529315987126 0.89942145 0.6914214 prediction 0.614467899690597 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1565029 chr1:1565032 nonsynonymous SNV 0.982 2 24 hm5C_associated_SNPs_53547 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:1565020-1565040
64251 chr10 101591389 101591389 1 + G T STAD 101591386 + 101591366 101591406 41 AGGTGAAGTTCTCCATCTACCTGGAGTACCTACAAGCAATA AGGTGAAGTTCTCCATCTACCTGTAGTACCTACAAGCAATA < 41bp 0.807198846016858 0.458355583526331 0.45003933 0.13669208 prediction 0.614397692033716 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101591386 chr10:101591389 stopgain 0.265 0 24 hm5C_associated_SNPs_53552 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:101591385-101591398
64251 chr1 6681588 6681588 1 + A C UCEC 6681584 + 6681564 6681604 41 ACCTGTCCTGTGCGAAAATCCGGAAATCCAATGTTCCAGAA ACCTGTCCTGTGCGAAAATCCGGACATCCAATGTTCCAGAA < 41bp 0.883077689767003 0.575897091990844 0.59405386 0.36787617 prediction 0.614361195552318 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681584 chr1:6681588 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_53555 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6681559-6681602
64251 chr6 28121309 28121309 1 + G T LUAD 28121307 + 28121287 28121327 41 AGTGTGGGAAGGCTTTCAGTCAGAGTGCGGGCCTTATTCTG AGTGTGGGAAGGCTTTCAGTCATAGTGCGGGCCTTATTCTG < 41bp 0.807161289644554 0.488348759240761 0.8847382 0.19022632 prediction 0.614322579289108 Functional Loss - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28121307 chr6:28121309 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_53558 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:28121279-28121319
64251 chr12 101017881 101017881 1 + G T UCEC 101017878 + 101017858 101017898 41 ACCTTGTATATCTGAGTCACCGAGAAAATGTATTTCATCCC ACCTTGTATATCTGAGTCACCGATAAAATGTATTTCATCCC < 41bp 0.807124083292495 0.445817908763392 0.31998217 0.0734283 prediction 0.61424816658499 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017878 chr12:101017881 nonsynonymous SNV 0.243 4 24 hm5C_associated_SNPs_53561 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:101017857-101017883
64251 chr5 140031363 140031363 1 + G T OV 140031361 + 140031341 140031381 41 CCCCAGGGCTGCACCTACCTCTGCACCACCTTCTAAGTCAC CCCCAGGGCTGCACCTACCTCTTCACCACCTTCTAAGTCAC < 41bp 0.817974326974056 0.510876523552321 0.027515203 0.026267946 prediction 0.614195606843468 Functional Loss - IK ENSG00000113141 CDS Human protein_coding chr5:140031361 chr5:140031363 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_53566 0 0 1 METAP2 POSTAR2 ENCODE chr5:140031358-140031384
64251 chr1 179054987 179054987 1 + A C BLCA 179054983 + 179054963 179055003 41 GACTGTGTCAGGATGTTCATCGCCACGTTCCACTTTCCTCA GACTGTGTCAGGATGTTCATCGCCCCGTTCCACTTTCCTCA < 41bp 0.807046819674868 0.399108622099392 0.15880111 0.10609293 prediction 0.614093639349736 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179054983 chr1:179054987 nonsynonymous SNV 0.513 0 25 hm5C_associated_SNPs_53572 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:179054976-179054987
64251 chr19 44652983 44652983 1 + G T LUAD 44652981 + 44652961 44653001 41 CTGAGGAGGAGCTGGGGCTGCTGGACCCTGTCCAGAGGAAT CTGAGGAGGAGCTGGGGCTGCTTGACCCTGTCCAGAGGAAT < 41bp 0.824459965316585 0.517418758482706 0.21813175 0.15841344 prediction 0.614082413667757 Functional Loss - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44652981 chr19:44652983 synonymous SNV . 0 23 hm5C_associated_SNPs_53573 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:44652966-44652995
64251 chr6 34789564 34789564 1 + G T SARC 34789561 + 34789541 34789581 41 GCCCACCTGGTTAGCCATCACTCGGGTCTACTGCAACAGGG GCCCACCTGGTTAGCCATCACTCTGGTCTACTGCAACAGGG < 41bp 0.807014170010746 0.44476614015785 0.22232315 0.2984854 prediction 0.614028340021493 Functional Loss - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34789561 chr6:34789564 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_53574 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:34789554-34789579
64251 chr9 133346227 133346227 1 + G T THCA 133346224 + 133346204 133346244 41 CTGTCTCTTTCCTGCAGCAACACGGGATTCCCATCCCGGTC CTGTCTCTTTCCTGCAGCAACACTGGATTCCCATCCCGGTC < 41bp 0.806980385644868 0.416662989046378 0.48099864 0.18112987 prediction 0.613960771289736 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133346224 chr9:133346227 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_53579 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:133346220-133346241
64251 chr1 116943622 116943622 1 + G T STAD 116943620 + 116943600 116943640 41 ATGTGGAAGACAGCTACGGGCAGCAGTGGGTGAGTGGGCAC ATGTGGAAGACAGCTACGGGCATCAGTGGGTGAGTGGGCAC < 41bp 0.806974714744908 0.495667155999362 0.30754444 0.14371607 prediction 0.613949429489816 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116943620 chr1:116943622 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_53580 0 0 7 TARDBP POSTAR2 DRA001158,DRS012385 chr1:116943589-116943623
64251 chr19 16339708 16339708 1 + G T SARC 16339706 + 16339686 16339726 41 GTTAAGTGGGTCCCCGAGAACAGCGAGATCGTGTGGTCCAT GTTAAGTGGGTCCCCGAGAACATCGAGATCGTGTGGTCCAT < 41bp 0.806970388086177 0.48636774003012 0.44500813 0.13715467 prediction 0.613940776172355 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16339706 chr19:16339708 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_53581 0 0 2 GRWD1 POSTAR2 ENCODE chr19:16339649-16339757
64251 chr19 35551551 35551551 1 + G T HNSC 35551548 + 35551528 35551568 41 TAGGCGGAACCGGGTCCTGTCCCGATGGCGAGTGTTTGCCG TAGGCGGAACCGGGTCCTGTCCCTATGGCGAGTGTTTGCCG < 41bp 0.806970029272338 0.436317146906676 0.17796692 0.16672888 prediction 0.613940058544675 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35551548 chr19:35551551 nonsynonymous SNV 0.989 2 24 hm5C_associated_SNPs_53582 0 0 2 PPIG POSTAR2 ENCODE chr19:35551529-35551557
64251 chr6 1313599 1313599 1 + G T LUAD 1313596 + 1313576 1313616 41 CGCAAGCGCCTCAGCCACCGCGCGCCGGTCCCCGCGCCCGG CGCAAGCGCCTCAGCCACCGCGCTCCGGTCCCCGCGCCCGG < 41bp 0.806968618299185 0.493358540873498 0.52743965 0.38532788 prediction 0.61393723659837 Functional Loss - FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313596 chr6:1313599 synonymous SNV . 0 24 hm5C_associated_SNPs_53583 0 0 2 SLTM POSTAR2 ENCODE chr6:1313565-1313601
64251 chr6 26156631 26156631 1 + G T STAD 26156629 + 26156609 26156649 41 TGCCTTCAACATGTCCGAGACTGCGCCTGCCGCGCCCGCTG TGCCTTCAACATGTCCGAGACTTCGCCTGCCGCGCCCGCTG < 41bp 0.807971917685775 0.501007514018975 0.43455684 0.30940142 prediction 0.6139288073336 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156629 chr6:26156631 nonsynonymous SNV 0.924 2 23 hm5C_associated_SNPs_53584 0 0 72 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr11 58894356 58894356 1 + G T rs561125707 58894353 + 58894333 58894373 41 ACCATTCAAGCCAGCAATCTCATGACTGGGTATATGTCCAA ACCATTCAAGCCAGCAATCTCATTACTGGGTATATGTCCAA < 41bp 0.807020317449396 0.500084490599607 0.071044534 0.03867486 prediction 0.613871653699579 Functional Loss - FAM111B ENSG00000189057 UTR3 Human protein_coding chr11:58894353 chr11:58894356 . . 0 24 hm5C_associated_SNPs_53586 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:58894318-58894356
64251 chr19 56669923 56669923 1 + G T LUSC 56669920 + 56669900 56669940 41 GGGTGCCTCAGGATGTGACGCAGGGCCCTGGGGCCACAGGT GGGTGCCTCAGGATGTGACGCAGTGCCCTGGGGCCACAGGT < 41bp 0.806887571578718 0.420084581028415 0.88620573 0.29183924 prediction 0.613775143157436 Functional Loss - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56669920 chr19:56669923 nonsynonymous SNV 0.022 3 24 hm5C_associated_SNPs_53590 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:56669912-56669936
64251 chr11 67051382 67051382 1 + A T HNSC 67051378 + 67051358 67051398 41 GTGAACGCGGCCGACGCCTTCGACATTGGCTCCTTCGATGA GTGAACGCGGCCGACGCCTTCGACTTTGGCTCCTTCGATGA < 41bp 0.819158419198245 0.512279408808881 0.3556357 0.38649902 prediction 0.613758020778729 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67051378 chr11:67051382 nonsynonymous SNV 0.984 4 25 hm5C_associated_SNPs_53591 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:67051381-67051382
64251 chr15 23811207 23811207 1 + G T UCEC 23811205 + 23811185 23811225 41 CCGTTGCCAAGCCGAAGCAGCGGCATTTGGACAAAGCAGAT CCGTTGCCAAGCCGAAGCAGCGTCATTTGGACAAAGCAGAT < 41bp 0.822735737094749 0.515869974254317 0.069378436 0.046830237 prediction 0.613731525680865 Functional Loss - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811205 chr15:23811207 nonsynonymous SNV 0.100 4 23 hm5C_associated_SNPs_53594 0 0 1 UCHL5 POSTAR2 ENCODE chr15:23811173-23811278
64251 chr1 40735679 40735679 1 + G T READ 40735676 + 40735656 40735696 41 TTCTTCATGAAAGATGCAATCAAGAAATTTGTTGTGACTCA TTCTTCATGAAAGATGCAATCAATAAATTTGTTGTGACTCA < 41bp 0.855295658094151 0.548454610935944 0.70318776 0.21071935 prediction 0.613682094316413 Functional Loss - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40735676 chr1:40735679 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_53596 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:40735646-40735679
64251 chr15 80987675 80987675 1 + G T rs117959127 80987672 + 80987652 80987692 41 GGCTGCAGCCGCCCTCCGCGCTCGCCTGCCAGCTCCCTCGC GGCTGCAGCCGCCCTCCGCGCTCTCCTGCCAGCTCCCTCGC < 41bp 0.830712117747553 0.523883269724208 0.12444839 0.22147733 prediction 0.613657696046691 Functional Loss - ABHD17C ENSG00000136379 UTR5 Human protein_coding chr15:80987672 chr15:80987675 . . 0 24 hm5C_associated_SNPs_53600 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:80987660-80987680
64251 chr7 148844735 148844735 1 + G T rs139320278 148844733 + 148844713 148844753 41 CAGGGCCGGGTCGGCGCCGCCTGTGGAGAGGACCCGGCGGC CAGGGCCGGGTCGGCGCCGCCTTTGGAGAGGACCCGGCGGC < 41bp 0.806819380037089 0.490871299846559 0.37116873 0.2632673 prediction 0.613638760074177 Functional Loss - ZNF398 ENSG00000197024 UTR5 Human protein_coding chr7:148844733 chr7:148844735 . . 0 23 hm5C_associated_SNPs_53603 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:148844734-148844735
64251 chr5 52778754 52778754 1 + G T BLCA 52778751 + 52778731 52778771 41 AAGCGAAGAACGGCCGCTGCCAGGTCCTGTACAAGACCGAA AAGCGAAGAACGGCCGCTGCCAGTTCCTGTACAAGACCGAA < 41bp 0.806755886245239 0.455889428540066 0.43216136 0.080228984 prediction 0.613511772490478 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52778751 chr5:52778754 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53610 0 0 2 U2AF1 POSTAR2 ENCODE chr5:52778698-52778776
64251 chr16 31121591 31121591 1 + G T UCEC 31121588 + 31121568 31121608 41 CGACAGCTGCTGGATGACCACAAGGATGTGGTGACCCTCTT CGACAGCTGCTGGATGACCACAATGATGTGGTGACCCTCTT < 41bp 0.806703445730924 0.430973442629407 0.5875236 0.2212413 prediction 0.613406891461849 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121588 chr16:31121591 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_53618 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31121583-31121609
64251 chr19 3765207 3765207 1 + G T UCEC 3765204 + 3765184 3765224 41 GGAAAAGGTGCAGTGACCAGCGAGGCCCTCAAGGACCCCGA GGAAAAGGTGCAGTGACCAGCGATGCCCTCAAGGACCCCGA < 41bp 0.888913227428859 0.582225263105833 0.9038716 0.32217258 prediction 0.613375928646053 Functional Loss - MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3765204 chr19:3765207 nonsynonymous SNV 0.074 0 24 hm5C_associated_SNPs_53621 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:3765186-3765230
64251 chr11 117109397 117109397 1 + G T UCEC 117109395 + 117109375 117109415 41 ACAATAACCAAGGAGAATAACAGAAATGTCCATTTGGAGCA ACAATAACCAAGGAGAATAACATAAATGTCCATTTGGAGCA < 41bp 0.807292326219261 0.500622687991287 0.40512574 0.07047784 prediction 0.613339276455948 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117109395 chr11:117109397 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_53623 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr11:117109370-117109397
64251 chr14 73421133 73421133 1 + G T LUAD 73421130 + 73421110 73421150 41 CCTGTTGACCAACGTGGTGACGGGACACCGGCAGTCCTTTG CCTGTTGACCAACGTGGTGACGGTACACCGGCAGTCCTTTG < 41bp 0.872295989824417 0.565641606487946 0.8962826 0.7395112 prediction 0.613308766672941 Functional Loss - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73421130 chr14:73421133 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_53625 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr14:73421119-73421144
64251 chr19 7587652 7587652 1 + G T rs61736595 7587650 + 7587630 7587670 41 CCCCAGCATGACAGCCCCGGCGGGTCCGCGCGGCTCAGGTG CCCCAGCATGACAGCCCCGGCGTGTCCGCGCGGCTCAGGTG < 41bp 0.810184323245426 0.503557095878233 0.7845521 0.42642415 prediction 0.613254454734387 Functional Loss - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7587650 chr19:7587652 nonsynonymous SNV 0.451 4 23 hm5C_associated_SNPs_53630 1 0 1 DDX3X POSTAR2 ENCODE chr19:7587556-7587668
64251 chr17 62080238 62080238 1 - C A GBM 62080240 - 62080220 62080260 41 CATCATAGTCACGGTGGTGTCGGTGTTGCTGTCCCTGTTCG CATCATAGTCACGGTGGTGTCGTTGTTGCTGTCCCTGTTCG < 41bp 0.829015167567112 0.522485448339914 0.39618987 0.17935055 prediction 0.613059438454396 Functional Loss - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62080240 chr17:62080238 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_53645 0 0 2 YBX3 POSTAR2 ENCODE chr17:62080205-62080269
64251 chr6 99283511 99283511 1 + G T LUSC 99283508 + 99283488 99283528 41 GGTCCGCCTGGCCACCCAGGCGCGCACCACGACCCGCACTC GGTCCGCCTGGCCACCCAGGCGCTCACCACGACCCGCACTC < 41bp 0.806511088035661 0.445987330669075 0.24962577 0.16492778 prediction 0.613022176071322 Functional Loss - POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283508 chr6:99283511 synonymous SNV . 0 24 hm5C_associated_SNPs_53646 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:99283511-99283512
64251 chr4 2044096 2044096 1 + G T rs560858476 2044093 + 2044073 2044113 41 CTGGCCATGGCCCCCCCGCCCGCGTGCCGGTCCCCGATGTC CTGGCCATGGCCCCCCCGCCCGCTTGCCGGTCCCCGATGTC < 41bp 0.806487168599541 0.449620921779749 0.40253946 0.14537653 prediction 0.612974337199083 Functional Loss - C4orf48 ENSG00000243449 CDS Human protein_coding chr4:2044093 chr4:2044096 synonymous SNV . 0 24 hm5C_associated_SNPs_53649 0 0 3 DDX3X POSTAR2 ENCODE chr4:2044069-2044106
64251 chr3 44694153 44694153 1 + G T TGCT 44694150 + 44694130 44694170 41 TCATTACCAGGGACTCTGGCCAAGAGTGAGATACTGGAGAC TCATTACCAGGGACTCTGGCCAATAGTGAGATACTGGAGAC < 41bp 0.870519881861812 0.564033727208104 0.6056317 0.36444116 prediction 0.612972309307416 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44694150 chr3:44694153 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_53650 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:44694131-44694171
64251 chr19 46181247 46181247 1 + G T BRCA 46181245 + 46181225 46181265 41 AAATGCGCTGCCGGGATTACCGGCTGAGGTGAGGGCATGCG AAATGCGCTGCCGGGATTACCGTCTGAGGTGAGGGCATGCG < 41bp 0.806453103354072 0.486115319405211 0.8906213 0.41267854 prediction 0.612906206708144 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46181245 chr19:46181247 synonymous SNV . 0 23 hm5C_associated_SNPs_53656 0 0 1 U2AF2 POSTAR2 ENCODE chr19:46181155-46181252
64251 chr3 179426658 179426658 1 + G T UCEC 179426656 + 179426636 179426676 41 AAAGTGGTTCTTTGACAGCTCTGGGGGCAACGGGCATGCGC AAAGTGGTTCTTTGACAGCTCTTGGGGCAACGGGCATGCGC < 41bp 0.822209068524492 0.515804903942754 0.8797033 0.7206779 prediction 0.612808329163476 Functional Loss - USP13 ENSG00000058056 CDS Human protein_coding chr3:179426656 chr3:179426658 nonsynonymous SNV 0.969 4 23 hm5C_associated_SNPs_53664 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:179426647-179426663
64251 chr16 57775655 57775655 1 + G T LUAD 57775653 + 57775633 57775673 41 ACTGGTGCTGGGCAAAGCCTCCGGGCGGCTGCTGGCTACAG ACTGGTGCTGGGCAAAGCCTCCTGGCGGCTGCTGGCTACAG < 41bp 0.806396572929418 0.474681643926884 0.91147846 0.41957104 prediction 0.612793145858835 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57775653 chr16:57775655 nonsynonymous SNV 0.954 4 23 hm5C_associated_SNPs_53666 1 0 2 GRWD1 POSTAR2 ENCODE chr16:57775603-57775668
64251 chr20 61910347 61910347 1 + G T LUAD 61910344 + 61910324 61910364 41 AACGCCATGTCCTCCCTGTACTCGGTGAGGACTTGGCCCTG AACGCCATGTCCTCCCTGTACTCTGTGAGGACTTGGCCCTG < 41bp 0.88275312590354 0.576377429429056 0.16296118 0.060756326 prediction 0.612751392948969 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61910344 chr20:61910347 synonymous SNV . 0 24 hm5C_associated_SNPs_53667 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917662 chr20:61910340-61910360
64251 chr8 30623765 30623765 1 + G T UCEC 30623762 + 30623742 30623782 41 GGTCTTATTTGACTGGATGACGAGAATTGGGTACCACATAT GGTCTTATTTGACTGGATGACGATAATTGGGTACCACATAT < 41bp 0.842066334799902 0.535718153877597 0.47287416 0.17680728 prediction 0.61269636184461 Functional Loss - UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30623762 chr8:30623765 . 0.004 0 24 hm5C_associated_SNPs_53669 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr8:30623747-30623778
64251 chr10 60272971 60272971 1 + G T LUAD 60272969 + 60272949 60272989 41 CCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCC CCCGGCTCCAACAGCGAGCGCATCACCGACTCCCCAGTGCC < 41bp 0.818608190818711 0.512271528000353 0.061199218 0.030305535 prediction 0.612673325636716 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60272969 chr10:60272971 nonsynonymous SNV 0.970 1 23 hm5C_associated_SNPs_53670 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr10:60272960-60273000
64251 chr16 57765098 57765098 1 + G T LUAD 57765096 + 57765076 57765116 41 GACACAAGGAACTGGCCCCACTGAAGTACCTGGCTCTGGAG GACACAAGGAACTGGCCCCACTTAAGTACCTGGCTCTGGAG < 41bp 0.814005549517498 0.50767270400013 0.5781683 0.32613313 prediction 0.612665691034737 Functional Loss - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57765096 chr16:57765098 synonymous SNV . 0 23 hm5C_associated_SNPs_53671 0 0 1 TBRG4 POSTAR2 ENCODE chr16:57765088-57765127
64251 chr4 57888373 57888373 1 + G T UCEC 57888370 + 57888350 57888390 41 AGTCTAAAAAAGGATTTGATCAAGAAGAAGTTTTTGAGAAG AGTCTAAAAAAGGATTTGATCAATAAGAAGTTTTTGAGAAG < 41bp 0.806331995487978 0.460364297506802 0.7443278 0.07197118 prediction 0.612663990975957 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57888370 chr4:57888373 stopgain 1.000 1 24 hm5C_associated_SNPs_53672 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:57888337-57888395
64251 chr22 38084982 38084982 1 + G T LUSC 38084979 + 38084959 38084999 41 ACCTCTCGGGGGCCCGGCTGCTCGGGCTGACCCCACCTGAG ACCTCTCGGGGGCCCGGCTGCTCTGGCTGACCCCACCTGAG < 41bp 0.879804299198112 0.573487361493319 0.81775737 0.4850575 prediction 0.612633875409587 Functional Loss - NOL12 ENSG00000100101 CDS Human protein_coding chr22:38084979 chr22:38084982 nonsynonymous SNV 0.023 5 24 hm5C_associated_SNPs_53675 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38084927-38084994
64251 chr1 161130911 161130911 1 + G T LUSC 161130908 + 161130888 161130928 41 GTAGCACTTCTCTCCGCCGCCTAGGGGGCTTTCCTGGACCC GTAGCACTTCTCTCCGCCGCCTATGGGGCTTTCCTGGACCC < 41bp 0.806296312919882 0.430044793599993 0.39816046 0.11915967 prediction 0.612592625839764 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130908 chr1:161130911 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_53680 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:161130880-161130920
64251 chr19 13264371 13264371 1 + G T UCEC 13264369 + 13264349 13264389 41 AAAGTCAGCCGCAAACGACGCAGCAGCAGCCTGAGCGACGG AAAGTCAGCCGCAAACGACGCATCAGCAGCCTGAGCGACGG < 41bp 0.842320861644271 0.53602530970882 0.16073006 0.00857085 prediction 0.612591103870903 Functional Loss - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264369 chr19:13264371 nonsynonymous SNV 0.780 1 23 hm5C_associated_SNPs_53681 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:13264360-13264380
64251 chr3 49749981 49749981 1 + G T CESC 49749979 + 49749959 49749999 41 CATTGAGCACGGTGATCGCACAGGGTCTCTCTTTGCCTTCA CATTGAGCACGGTGATCGCACATGGTCTCTCTTTGCCTTCA < 41bp 0.839364856036048 0.533074853611619 0.9309563 0.6175354 prediction 0.612580004848858 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49749979 chr3:49749981 nonsynonymous SNV 0.112 4 23 hm5C_associated_SNPs_53682 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:49749979-49750000
64251 chr19 1220649 1220649 1 + G T LUAD 1220646 + 1220626 1220666 41 GCTCCCCGGCTTTCCAGCCGCCCGAGATTGCCAACGGCCTG GCTCCCCGGCTTTCCAGCCGCCCTAGATTGCCAACGGCCTG < 41bp 0.806245021291773 0.437344035504729 0.3267636 0.16497767 prediction 0.612490042583546 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220646 chr19:1220649 stopgain 0.877 1 24 hm5C_associated_SNPs_53688 0 0 5 DDX3X POSTAR2 GSE59096,GSM1427360 chr19:1220640-1220660
64251 chr9 136891030 136891030 1 + G T rs190049012 136891027 + 136891007 136891047 41 CCTGGGGGCCCCTTCCGGTCCCGGGGCTGACGCCTGGCGGC CCTGGGGGCCCCTTCCGGTCCCGTGGCTGACGCCTGGCGGC < 41bp 0.884992106207036 0.57876463617082 0.9325493 0.75413406 prediction 0.612454940072434 Functional Loss - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136891027 chr9:136891030 . . 0 24 hm5C_associated_SNPs_53690 0 0 2 DDX3X POSTAR2 ENCODE chr9:136890966-136891085
64251 chr20 56139401 56139401 1 + G T UCEC 56139399 + 56139379 56139419 41 CATTGATGAGCCGCTAGCTTCAGGTGTCACCATCACGTCCT CATTGATGAGCCGCTAGCTTCATGTGTCACCATCACGTCCT < 41bp 0.854953538792463 0.548779420108207 0.87415266 0.1928693 prediction 0.612348237368512 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139399 chr20:56139401 nonsynonymous SNV 0.005 3 23 hm5C_associated_SNPs_53696 0 0 4 GRWD1 POSTAR2 ENCODE chr20:56139394-56139426
64251 chr17 21731020 21731020 1 + G T LUAD 21731017 + 21730997 21731037 41 AAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCC AAAATGTGAAGGCCAAGATCCAATATAAAGAAGGCATCCCC < 41bp 0.806162559721159 0.457085176901503 0.7388431 0.24634844 prediction 0.612325119442317 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731017 chr17:21731020 nonsynonymous SNV 0.433 1 24 hm5C_associated_SNPs_53698 0 0 1 ZNF622 POSTAR2 ENCODE chr17:21731019-21731092
64251 chr7 134363709 134363709 1 + G T LUSC 134363706 + 134363686 134363726 41 CTGTTGGGCCTCATCAGTTCCTGGGTGACCAAGAGGCGATC CTGTTGGGCCTCATCAGTTCCTGTGTGACCAAGAGGCGATC < 41bp 0.868932981776384 0.562823426053725 0.8886354 0.10347879 prediction 0.612219111445319 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134363706 chr7:134363709 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_53702 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:134363688-134363711
64251 chr8 23148978 23148978 1 + G T rs2272760 23148975 + 23148955 23148995 41 GGAGAGAAGGACCTTGCCCACGTGGTAGAGATCTATGACTT GGAGAGAAGGACCTTGCCCACGTTGTAGAGATCTATGACTT < 41bp 0.806049135127803 0.431366524622625 0.5360525 0.14102063 prediction 0.612098270255605 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23148975 chr8:23148978 synonymous SNV . 0 24 hm5C_associated_SNPs_53707 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr8:23148960-23148989
64251 chr16 28878225 28878225 1 + G T THYM 28878222 + 28878202 28878242 41 CCTGACCCAGCCGGAGTGGGCCGGGGAGGAGGGGTGGCTGG CCTGACCCAGCCGGAGTGGGCCGTGGAGGAGGGGTGGCTGG < 41bp 0.806013834105681 0.439532343693411 0.92239296 0.8287159 prediction 0.612027668211361 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28878222 chr16:28878225 synonymous SNV . 0 24 hm5C_associated_SNPs_53712 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28878220-28878240
64251 chr1 86047742 86047742 1 + G T COAD 86047739 + 86047719 86047759 41 GCTGCATTCCTCTGTGTCCCCAAGAACTATCTCTCCCCAAC GCTGCATTCCTCTGTGTCCCCAATAACTATCTCTCCCCAAC < 41bp 0.882276560630451 0.57626904252381 0.89269054 0.25163496 prediction 0.612015036213281 Functional Loss - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047739 chr1:86047742 stopgain 1.000 1 24 hm5C_associated_SNPs_53714 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:86047734-86047766
64251 chr22 21272358 21272358 1 + G T COAD 21272356 + 21272336 21272376 41 CCGCGATTCTTCCACCTGCCCTGGGGACTATGTGCTGTCGG CCGCGATTCTTCCACCTGCCCTTGGGACTATGTGCTGTCGG < 41bp 0.837612071519919 0.531626693930744 0.3456574 0.07414818 prediction 0.611970755178349 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21272356 chr22:21272358 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_53717 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:21272325-21272404
64251 chr11 63978540 63978540 1 + G T LIHC 63978537 + 63978517 63978557 41 CCCTCAGGCATCCGGCACCCCGAGGAGCTGTCCCTGCTCCG CCCTCAGGCATCCGGCACCCCGATGAGCTGTCCCTGCTCCG < 41bp 0.805942751725831 0.409925391421249 0.9016513 0.3445987 prediction 0.611885503451661 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63978537 chr11:63978540 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_53722 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378375 chr11:63978540-63978560
64251 chr19 43858435 43858435 1 + G T LUAD 43858432 + 43858412 43858452 41 GAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGGCCTCTC GAGCCCCGCGTCACTGAGCACCGTATGGGCCCCGGCCTCTC < 41bp 0.887271642432917 0.581335193944497 0.76090586 0.32886675 prediction 0.61187289697684 Functional Loss - CD177 ENSG00000204936 CDS Human protein_coding chr19:43858432 chr19:43858435 synonymous SNV . 0 24 hm5C_associated_SNPs_53723 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:43858420-43858440
64251 chr6 170627006 170627006 1 + G T LUAD 170627004 + 170626984 170627024 41 AGCATAACTGTCTTGGGATTCTGGGGGAAGACACTGATTAC AGCATAACTGTCTTGGGATTCTTGGGGAAGACACTGATTAC < 41bp 0.807433491123589 0.501502717846074 0.9002253 0.5739805 prediction 0.611861546555031 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627004 chr6:170627006 synonymous SNV . 0 23 hm5C_associated_SNPs_53725 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:170626959-170627021
64251 chr8 42179461 42179461 1 + G T LIHC 42179458 + 42179438 42179478 41 CAGGAGACTAAGGGAAAAACCTCGAGGTAAGTGGGGTTCTG CAGGAGACTAAGGGAAAAACCTCTAGGTAAGTGGGGTTCTG < 41bp 0.856318396731205 0.550425096994564 0.8124504 0.8789886 prediction 0.611786599473281 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42179458 chr8:42179461 nonsynonymous SNV 0.037 3 24 hm5C_associated_SNPs_53727 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:42179460-42179496
64251 chr9 131289510 131289510 1 + G T UCEC 131289508 + 131289488 131289528 41 TGCAGTGGTACCAGCAGCTGCAGGATGCTTCCATGCAGTGT TGCAGTGGTACCAGCAGCTGCATGATGCTTCCATGCAGTGT < 41bp 0.805876253649431 0.49384599482847 0.912596 0.08913976 prediction 0.611752507298862 Functional Loss - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131289508 chr9:131289510 nonsynonymous SNV 0.957 4 23 hm5C_associated_SNPs_53729 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:131289482-131289518
64251 chr3 133473450 133473450 1 + G T LUAD 133473447 + 133473427 133473467 41 CACGGGTCTAGGCAGGTCCGCTGGGTGGAACATCCCCATAG CACGGGTCTAGGCAGGTCCGCTGTGTGGAACATCCCCATAG < 41bp 0.805847883847211 0.419902887352499 0.8773261 0.12023184 prediction 0.611695767694421 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133473447 chr3:133473450 nonsynonymous SNV 0.108 4 24 hm5C_associated_SNPs_53733 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:133473443-133473467
64251 chr9 139802569 139802569 1 + G T LUSC 139802566 + 139802546 139802586 41 CTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTCCG CTCATGCTGACCGAATGTCCCGCTTGCAAAGGCCTGGTCCG < 41bp 0.805832670910006 0.423503300574877 0.14145622 0.021417022 prediction 0.611665341820012 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139802566 chr9:139802569 synonymous SNV . 0 24 hm5C_associated_SNPs_53736 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:139802567-139802595
64251 chr3 49213186 49213186 1 + G T STAD 49213184 + 49213164 49213204 41 TTGTTATTGGGGGTGTGGCCCAGGGCCCCAGTCAAGCCGTG TTGTTATTGGGGGTGTGGCCCATGGCCCCAGTCAAGCCGTG < 41bp 0.821659440958655 0.515848293435288 0.90516543 0.5440437 prediction 0.611622295046735 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49213184 chr3:49213186 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53741 0 0 4 HNRNPM POSTAR2 ENCODE chr3:49213171-49213260
64251 chr15 23812149 23812149 1 + G T UCEC 23812147 + 23812127 23812167 41 TGCAGGTATTTTGCGGAAGGCAGGGGTAACTGCCCATTTGG TGCAGGTATTTTGCGGAAGGCATGGGTAACTGCCCATTTGG < 41bp 0.83133762593299 0.525538419780468 0.93784153 0.89211667 prediction 0.611598412305043 Functional Loss - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23812147 chr15:23812149 nonsynonymous SNV 0.033 1 23 hm5C_associated_SNPs_53744 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831625 chr15:23812140-23812160
64251 chr9 4844632 4844632 1 + A C LUAD 4844628 + 4844608 4844648 41 GCCAGGGAGCAGCAGTACTTCCAGAGGACCTTGGCAGGAAC GCCAGGGAGCAGCAGTACTTCCAGCGGACCTTGGCAGGAAC < 41bp 0.896474828929705 0.590689776614727 0.89994717 0.8638104 prediction 0.611570104629955 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4844628 chr9:4844632 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_53746 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:4844597-4844635
64251 chr4 78079767 78079767 1 + G T GBM 78079764 + 78079744 78079784 41 TGTTGAACGTCTACCTGGAACAAGAAGAGAGATTCCAACCT TGTTGAACGTCTACCTGGAACAATAAGAGAGATTCCAACCT < 41bp 0.874983474897024 0.569199161845988 0.2911449 0.039856017 prediction 0.611568626102073 Functional Loss - CCNG2 ENSG00000138764 CDS Human protein_coding chr4:78079764 chr4:78079767 stopgain 0.963 1 24 hm5C_associated_SNPs_53748 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:78079715-78079771
64251 chr12 62979189 62979189 1 + A C UCEC 62979185 + 62979165 62979205 41 ACCTCAAGAAGGCTACATCTCACGAATGGCACTCTCAGTGC ACCTCAAGAAGGCTACATCTCACGCATGGCACTCTCAGTGC < 41bp 0.881980083638038 0.576232460380702 0.025139153 0.009996891 prediction 0.611495246514671 Functional Loss - MON2 ENSG00000061987 CDS Human protein_coding chr12:62979185 chr12:62979189 synonymous SNV . 0 25 hm5C_associated_SNPs_53750 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr12:62979188-62979201
64251 chr12 34175705 34175705 1 + G T LUAD 34175702 + 34175682 34175722 41 GAGGGCCATTTCTCCCTTTCCCAGGTGGGGTCCCCAACCTG GAGGGCCATTTCTCCCTTTCCCATGTGGGGTCCCCAACCTG < 41bp 0.805746004723713 0.442441360030337 0.8345455 0.24481672 prediction 0.611492009447426 Functional Loss - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175702 chr12:34175705 nonsynonymous SNV 0.888 1 24 hm5C_associated_SNPs_53751 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:34175690-34175716
64251 chr6 1612111 1612111 1 + G T rs543505807 1612109 + 1612089 1612129 41 TCACCTCGTGGTACCTGAACCAGGCGGGCGGAGACCTGGGC TCACCTCGTGGTACCTGAACCATGCGGGCGGAGACCTGGGC < 41bp 0.82631577414916 0.520575580411464 0.8082504 0.31892484 prediction 0.611480387475392 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1612109 chr6:1612111 nonsynonymous SNV 0.973 0 23 hm5C_associated_SNPs_53752 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:1612086-1612118
64251 chr17 73481600 73481600 1 + G T UCEC 73481598 + 73481578 73481618 41 GCAGTGCTGGAAGGACATCTCAGGGAGCGGAAGAAGTGTCT GCAGTGCTGGAAGGACATCTCATGGAGCGGAAGAAGTGTCT < 41bp 0.842144655176122 0.536434592968391 0.8866264 0.6079561 prediction 0.611420124415463 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73481598 chr17:73481600 nonsynonymous SNV 0.124 1 23 hm5C_associated_SNPs_53753 0 0 4 DDX24 POSTAR2 ENCODE chr17:73481598-73481619
64251 chr8 145065567 145065567 1 + A C KIRP 145065563 + 145065543 145065583 41 CCTACGGTCAGCCAGGGTACCCCCATGGCCCCAGCCCCTAC CCTACGGTCAGCCAGGGTACCCCCCTGGCCCCAGCCCCTAC < 41bp 0.805708389502982 0.407366464647655 0.92201066 0.061195016 prediction 0.611416779005963 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145065563 chr8:145065567 nonsynonymous SNV 0.946 0 25 hm5C_associated_SNPs_53754 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145065555-145065600
64251 chr6 89862895 89862895 1 + A T HNSC 89862891 + 89862871 89862911 41 AGACAGCAAATGAAACCAACCTGGAGAGTTCATGGTATGAA AGACAGCAAATGAAACCAACCTGGTGAGTTCATGGTATGAA < 41bp 0.806672525358026 0.500965297575695 0.06663275 0.08016348 prediction 0.611414455564661 Functional Loss - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89862891 chr6:89862895 stopgain 1.000 1 25 hm5C_associated_SNPs_53756 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:89862866-89862897
64251 chr2 131100699 131100699 1 + G T HNSC 131100697 + 131100677 131100717 41 CTGCGCCGCGAGTACCTGTACCGCAAGGCCCGGGAGGAGGC CTGCGCCGCGAGTACCTGTACCTCAAGGCCCGGGAGGAGGC < 41bp 0.829808645464646 0.52411465369388 0.05151871 0.020799369 prediction 0.611387983541532 Functional Loss - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131100697 chr2:131100699 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_53758 0 0 3 DDX3X POSTAR2 ENCODE chr2:131100658-131100743
64251 chr16 67208964 67208964 1 + G T SARC 67208962 + 67208942 67208982 41 ATCTCTAGATTCCTGAAGGCCAGAGCTCTGACAGGCGGTGC ATCTCTAGATTCCTGAAGGCCATAGCTCTGACAGGCGGTGC < 41bp 0.805658899912408 0.495551961810567 0.33715048 0.16546977 prediction 0.611317799824816 Functional Loss - NOL3 ENSG00000140939 CDS Human protein_coding chr16:67208962 chr16:67208964 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_53763 0 0 2 LSM11 POSTAR2 ENCODE chr16:67208955-67209025
64251 chr1 19582447 19582447 1 + G T LUAD 19582445 + 19582425 19582465 41 CGTGAATTGTCCCACAGCTTCGGAAATGTGTGGACACCTAC CGTGAATTGTCCCACAGCTTCGTAAATGTGTGGACACCTAC < 41bp 0.805643623345605 0.4929869108866 0.4590749 0.19605312 prediction 0.61128724669121 Functional Loss - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19582445 chr1:19582447 synonymous SNV . 0 23 hm5C_associated_SNPs_53768 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:19582440-19582460
64251 chr8 146278072 146278072 1 + G T LUAD 146278070 + 146278050 146278090 41 CCCGGCCCAGTTTCCAGCGCCCGGAATCCTTCCACTGTCTG CCCGGCCCAGTTTCCAGCGCCCTGAATCCTTCCACTGTCTG < 41bp 0.805640905308019 0.483215262679043 0.78158414 0.23878023 prediction 0.611281810616037 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278070 chr8:146278072 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_53769 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146278019-146278086
64251 chr20 333868 333868 1 + G T THCA 333865 + 333845 333885 41 TCTCCCTAGATCAGCCTGTCCTCGGGGACCCTGCTTCTGCT TCTCCCTAGATCAGCCTGTCCTCTGGGACCCTGCTTCTGCT < 41bp 0.805630694623944 0.428238883252835 0.15561107 0.09245649 prediction 0.611261389247887 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:333865 chr20:333868 synonymous SNV . 0 24 hm5C_associated_SNPs_53772 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:333856-333896
64251 chr5 68715411 68715411 1 + G T SKCM 68715409 + 68715389 68715429 41 AGACTTCTACTCAAGTGACACAGAAGAACCAGCTATAGCGC AGACTTCTACTCAAGTGACACATAAGAACCAGCTATAGCGC < 41bp 0.805611348835753 0.496582312433596 0.049883813 0.006327778 prediction 0.611222697671505 Functional Loss - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68715409 chr5:68715411 stopgain 0.938 0 23 hm5C_associated_SNPs_53777 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:68715398-68715429
64251 chr16 88773618 88773618 1 + G T BRCA 88773616 + 88773596 88773636 41 CGAGCCGGAGATGCCTTCTGCAGGTGAGGCCTGGAGGTGGC CGAGCCGGAGATGCCTTCTGCATGTGAGGCCTGGAGGTGGC < 41bp 0.805557406852663 0.4773047614061 0.8793942 0.53884387 prediction 0.611114813705325 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88773616 chr16:88773618 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53781 0 0 5 DDX3X POSTAR2 ENCODE chr16:88773551-88773619
64251 chr15 78454661 78454661 1 + G T LUSC 78454659 + 78454639 78454679 41 GAGTTTGCCTTTGAGTATGCCCGGAACAACCACCGGAGCAA GAGTTTGCCTTTGAGTATGCCCTGAACAACCACCGGAGCAA < 41bp 0.805553591739396 0.489473843143307 0.41998097 0.060964644 prediction 0.611107183478792 Functional Loss - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78454659 chr15:78454661 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_53782 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:78454633-78454663
64251 chr3 37038200 37038200 1 + G T STAD 37038197 + 37038177 37038217 41 CAAGACAATGGCACCGGGATCAGGGTAAGTAAAACCTCAAA CAAGACAATGGCACCGGGATCAGTGTAAGTAAAACCTCAAA < 41bp 0.819360588901587 0.513829811112792 0.903372 0.47908896 prediction 0.611061555577588 Functional Loss - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37038197 chr3:37038200 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_53786 0 0 7 BUD13 POSTAR2 ENCODE chr3:37038160-37038201
64251 chr11 2424212 2424212 1 + A C COAD 2424208 + 2424188 2424228 41 TCCTCTGTGGCCCACACCAGCATGAGTGACAACGGAGGCTT TCCTCTGTGGCCCACACCAGCATGCGTGACAACGGAGGCTT < 41bp 0.875486463884582 0.569977916809903 0.8776612 0.81618243 prediction 0.611017094149358 Functional Loss - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424208 chr11:2424212 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_53790 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:2424200-2424220
64251 chr2 26257601 26257601 1 + A T LUAD 26257597 + 26257577 26257617 41 TTCAATACTACCTTTATTTCCACCATAGGTAAGACCTGTGG TTCAATACTACCTTTATTTCCACCTTAGGTAAGACCTGTGG < 41bp 0.805503637077782 0.492983084762717 0.03295672 0.1367988 prediction 0.611007274155564 Functional Loss - RAB10 ENSG00000084733 CDS Human protein_coding chr2:26257597 chr2:26257601 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_53792 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:26257543-26257603
64251 chr12 53819521 53819521 1 + G T LGG 53819518 + 53819498 53819538 41 TGGTTTGGGCCGGGCAGCTGCAAGGAAAACTGGTTGCCATC TGGTTTGGGCCGGGCAGCTGCAATGAAAACTGGTTGCCATC < 41bp 0.805486163459126 0.41630374150452 0.90099525 0.36713952 prediction 0.610972326918252 Functional Loss - AMHR2 ENSG00000135409 CDS Human protein_coding chr12:53819518 chr12:53819521 stopgain 0.081 0 24 hm5C_associated_SNPs_53795 0 0 1 DDX3X POSTAR2 ENCODE chr12:53819472-53819603
64251 chr19 10568686 10568686 1 + G T COAD 10568684 + 10568664 10568704 41 ACAGCCCATGTCCCAAATCACAGGGTTGAAAAAGTTGATGC ACAGCCCATGTCCCAAATCACATGGTTGAAAAAGTTGATGC < 41bp 0.805478215010145 0.476987746163172 0.94931513 0.77538633 prediction 0.610956430020289 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10568684 chr19:10568686 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_53796 0 0 1 YBX3 POSTAR2 ENCODE chr19:10568677-10568779
64251 chr22 45944519 45944519 1 + G T LUAD 45944517 + 45944497 45944537 41 CGACGAGTGCGCCCTGCCCACCGGGGGCCACATCTGCTCCT CGACGAGTGCGCCCTGCCCACCTGGGGCCACATCTGCTCCT < 41bp 0.805465328650995 0.458089318951197 0.92638206 0.1008445 prediction 0.61093065730199 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45944517 chr22:45944519 nonsynonymous SNV 0.974 5 23 hm5C_associated_SNPs_53799 0 0 1 RPS3 POSTAR2 ENCODE chr22:45944492-45944608
64251 chr1 36788238 36788238 1 - C A rs542369630 36788241 - 36788221 36788261 41 TGCCTGCTCGTCATCAGCATCTCGTGGGCGCCCCGCCCGCG TGCCTGCTCGTCATCAGCATCTCTTGGGCGCCCCGCCCGCG < 41bp 0.805460104408543 0.445965967332599 0.13107988 0.046014637 prediction 0.610920208817086 Functional Loss - EVA1B ENSG00000142694 CDS Human protein_coding chr1:36788241 chr1:36788238 synonymous SNV . 0 24 hm5C_associated_SNPs_53801 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:36788238-36788239
64251 chr5 178287009 178287009 1 + G T rs7446382 178287006 + 178286986 178287026 41 CTCTGCGGAGCTTTCGCTGCCCGGTGAGCGGCGCCGGGCTT CTCTGCGGAGCTTTCGCTGCCCGTTGAGCGGCGCCGGGCTT < 41bp 0.805455346148947 0.455378520079154 0.65540296 0.04270014 prediction 0.610910692297894 Functional Loss - ZNF354B ENSG00000178338 UTR5 Human protein_coding chr5:178287006 chr5:178287009 . . 0 24 hm5C_associated_SNPs_53802 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr5:178286975-178287010
64251 chr15 44751229 44751229 1 + G T LIHC 44751226 + 44751206 44751246 41 ATAAAAGATGAGGCTGAGAACACGGAAAGCTTCTCAGCAGT ATAAAAGATGAGGCTGAGAACACTGAAAGCTTCTCAGCAGT < 41bp 0.8054410417324 0.44555136828264 0.30740798 0.16360012 prediction 0.6108820834648 Functional Loss - CTDSPL2 ENSG00000137770 CDS Human protein_coding chr15:44751226 chr15:44751229 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53806 0 0 4 EWSR1 POSTAR2 SRX029344 chr15:44751197-44751229
64251 chr15 28900662 28900662 1 + G T LUSC 28900660 + 28900640 28900680 41 GAGTCCATGCTGAGGTGGCGCAGGGTGTGCCCGCAGGCCTC GAGTCCATGCTGAGGTGGCGCATGGTGTGCCCGCAGGCCTC < 41bp 0.846921070575749 0.541496392298519 0.8982619 0.5109803 prediction 0.610849356554461 Functional Loss - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28900660 chr15:28900662 . . 0 23 hm5C_associated_SNPs_53808 0 0 9 BUD13 POSTAR2 ENCODE chr15:28900611-28900684
64251 chr20 57767064 57767064 1 + G T STAD 57767061 + 57767041 57767081 41 GCGGAGAAGCCCTGGGATGCCAAGGCCCCCGAGGGCCGGCT GCGGAGAAGCCCTGGGATGCCAATGCCCCCGAGGGCCGGCT < 41bp 0.805408696930407 0.43990705880171 0.2060912 0.06029305 prediction 0.610817393860814 Functional Loss - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767061 chr20:57767064 nonsynonymous SNV 0.025 2 24 hm5C_associated_SNPs_53810 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:57767046-57767087
64251 chr19 36278580 36278580 1 + G T UCEC 36278578 + 36278558 36278598 41 GGCTTCTTCTCCCCAGCCCCCAGGGAGTGCCTGCCACCCTT GGCTTCTTCTCCCCAGCCCCCATGGAGTGCCTGCCACCCTT < 41bp 0.805395299985106 0.482236830264015 0.9389549 0.83445966 prediction 0.610790599970213 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278578 chr19:36278580 nonsynonymous SNV 0.682 2 23 hm5C_associated_SNPs_53812 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:36278559-36278586
64251 chr15 44048938 44048938 1 + G T BLCA 44048935 + 44048915 44048955 41 ATTTAGAGATGGTGAAGAAGCAGGTGCTTATGATGGACCTA ATTTAGAGATGGTGAAGAAGCAGTTGCTTATGATGGACCTA < 41bp 0.80536424616128 0.428567558434894 0.81589603 0.17976803 prediction 0.610728492322561 Functional Loss - PDIA3 ENSG00000167004 CDS Human protein_coding chr15:44048935 chr15:44048938 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53815 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:44048877-44048940
64251 chr3 9488989 9488989 1 + G T LGG 9488987 + 9488967 9489007 41 TACCCGGAGGTCTTCCCAAGCAGGGGTAAGAGTTGAAAAGA TACCCGGAGGTCTTCCCAAGCATGGGTAAGAGTTGAAAAGA < 41bp 0.805352163863105 0.483456584382345 0.93956536 0.5742194 prediction 0.61070432772621 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9488987 chr3:9488989 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_53818 0 0 6 BUD13 POSTAR2 ENCODE chr3:9488952-9489009
64251 chr9 138395820 138395820 1 + G T LUAD 138395818 + 138395798 138395838 41 CCGGCAATGACGACTCTCCGCTGGCTGTGCACCTCTACTGC CCGGCAATGACGACTCTCCGCTTGCTGTGCACCTCTACTGC < 41bp 0.805281435434533 0.481434835434185 0.062479883 0.024172366 prediction 0.610562870869067 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395818 chr9:138395820 synonymous SNV . 0 23 hm5C_associated_SNPs_53826 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395719-138395836
64251 chr9 138395821 138395821 1 + G T LUAD 138395818 + 138395798 138395838 41 CCGGCAATGACGACTCTCCGCTGGCTGTGCACCTCTACTGC CCGGCAATGACGACTCTCCGCTGTCTGTGCACCTCTACTGC < 41bp 0.805281435434533 0.418418639658978 0.062479883 0.035828263 prediction 0.610562870869067 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395818 chr9:138395821 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_53827 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395719-138395836
64251 chr16 722297 722297 1 + G T SARC 722295 + 722275 722315 41 ACCAGGAGAAGGGACAGACGCAGCGGAGCGTCCTCCTGTGC ACCAGGAGAAGGGACAGACGCATCGGAGCGTCCTCCTGTGC < 41bp 0.84017998648599 0.534901738006634 0.834023 0.1404697 prediction 0.610556496958713 Functional Loss - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722295 chr16:722297 nonsynonymous SNV 0.491 1 23 hm5C_associated_SNPs_53829 0 0 6 BUD13 POSTAR2 ENCODE chr16:722256-722319
64251 chr2 157367401 157367401 1 + A C LUSC 157367397 + 157367377 157367417 41 TCCATGGTGGTGTGAGATATCTGCAGAAGGCCATCATGAAG TCCATGGTGGTGTGAGATATCTGCCGAAGGCCATCATGAAG < 41bp 0.898112732288968 0.592866207911466 0.18008658 0.15510672 prediction 0.610493048755003 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157367397 chr2:157367401 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_53832 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:157367378-157367406
64251 chr19 11145616 11145616 1 + G T UCEC 11145613 + 11145593 11145633 41 ATGGACCTGGACCGCAGGCGCGAGGAGGCCCGCAACCCCAA ATGGACCTGGACCGCAGGCGCGATGAGGCCCGCAACCCCAA < 41bp 0.805223742500988 0.448108489944171 0.89771414 0.48685926 prediction 0.610447485001976 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145613 chr19:11145616 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_53835 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145591-11145616
64251 chr6 158492769 158492769 1 + G T UCEC 158492767 + 158492747 158492787 41 ACCTGACGGCCGGGCAGTCCCAGGTGAAGGAGCGGAATGAA ACCTGACGGCCGGGCAGTCCCATGTGAAGGAGCGGAATGAA < 41bp 0.82879825975069 0.523613556019239 0.87939644 0.2562168 prediction 0.610369407462902 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158492767 chr6:158492769 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_53842 0 0 3 BUD13 POSTAR2 ENCODE chr6:158492660-158492788
64251 chr16 2577778 2577778 1 + G T LUSC 2577776 + 2577756 2577796 41 CTTGCTCCCTCCTCCCAGGGCTGCACCTGGAGGGCCCCTTC CTTGCTCCCTCCTCCCAGGGCTTCACCTGGAGGGCCCCTTC < 41bp 0.805159238829874 0.486162755508664 0.2834053 0.21462885 prediction 0.610318477659748 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577776 chr16:2577778 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_53846 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2577778-2577801
64251 chr17 37901726 37901726 1 + G T LUSC 37901724 + 37901704 37901744 41 CATGGACTTCTCTGGCCATGCTGGGCGTGTCATTGAGAACC CATGGACTTCTCTGGCCATGCTTGGCGTGTCATTGAGAACC < 41bp 0.832807255883441 0.527672322684091 0.81643516 0.24749601 prediction 0.6102698663987 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37901724 chr17:37901726 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_53850 0 0 3 EFTUD2 POSTAR2 ENCODE chr17:37901714-37901780
64251 chr4 17838849 17838849 1 + G T PRAD 17838847 + 17838827 17838867 41 ATGTTCTCTGGGCTTTTGGTCAGCAGCAGGATTCTTTCTCG ATGTTCTCTGGGCTTTTGGTCATCAGCAGGATTCTTTCTCG < 41bp 0.805073634058001 0.489838379503362 0.34475398 0.09217957 prediction 0.610147268116003 Functional Loss - NCAPG ENSG00000109805 CDS Human protein_coding chr4:17838847 chr4:17838849 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53856 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:17838789-17838867
64251 chr9 136891828 136891828 1 + G T CESC 136891826 + 136891806 136891846 41 TTAGTGCGCGTGGGCCGTCTCAGAACAGCAGGGTTCCCAGG TTAGTGCGCGTGGGCCGTCTCATAACAGCAGGGTTCCCAGG < 41bp 0.833926465778425 0.528864171850384 0.89744884 0.20481488 prediction 0.610124587856082 Functional Loss - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136891826 chr9:136891828 . . 0 23 hm5C_associated_SNPs_53857 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:136891806-136891831
64251 chr5 145317770 145317770 1 + G T CESC 145317767 + 145317747 145317787 41 GGCTCCTTCCGCAGGCCTGGCACGATGACCTTGCAGGATGG GGCTCCTTCCGCAGGCCTGGCACTATGACCTTGCAGGATGG < 41bp 0.805061327987296 0.448513673620373 0.08308175 0.12898904 prediction 0.610122655974592 Functional Loss - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145317767 chr5:145317770 synonymous SNV . 0 24 hm5C_associated_SNPs_53859 0 0 1 SRSF1 POSTAR2 ENCODE chr5:145317681-145317844
64251 chr6 26158529 26158529 1 + G T COAD 26158526 + 26158506 26158546 41 AGCTATTCAGTGTATGTGTACAAGGTGCTGAAGCAGGTCCA AGCTATTCAGTGTATGTGTACAATGTGCTGAAGCAGGTCCA < 41bp 0.805009126515841 0.43415175891846 0.42181015 0.122568816 prediction 0.610018253031682 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158526 chr6:26158529 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_53867 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158340-26158620
64251 chr12 104376697 104376697 1 + G T LUSC 104376695 + 104376675 104376715 41 GTGGAAAGGACCACGCCCGGCAGCAAAGATCTCTCCAGGTA GTGGAAAGGACCACGCCCGGCATCAAAGATCTCTCCAGGTA < 41bp 0.819274232468035 0.514266939011398 0.2744542 0.15240458 prediction 0.610014586913273 Functional Loss - TDG ENSG00000139372 CDS Human protein_coding chr12:104376695 chr12:104376697 nonsynonymous SNV 0.909 4 23 hm5C_associated_SNPs_53868 0 0 2 PRPF8 POSTAR2 ENCODE chr12:104376664-104376744
64251 chr17 4836362 4836362 1 - C A KIRC 4836364 - 4836344 4836384 41 GGCGTCAGGAGCCCTGGGGGCAGGGTCTTCAGCTCATTGCC GGCGTCAGGAGCCCTGGGGGCATGGTCTTCAGCTCATTGCC < 41bp 0.843675971724755 0.538685013420114 0.9086464 0.6928574 prediction 0.609981916609282 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836364 chr17:4836362 nonsynonymous SNV 0.236 3 23 hm5C_associated_SNPs_53871 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:4836340-4836370
64251 chr6 52268744 52268744 1 + G T SARC 52268742 + 52268722 52268762 41 GGCTGGCTGCCAGGAGCAAGCAGCCTGGTACCACACCCTCC GGCTGGCTGCCAGGAGCAAGCATCCTGGTACCACACCCTCC < 41bp 0.804990686926729 0.480179351174999 0.8637802 0.5485639 prediction 0.609981373853457 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268742 chr6:52268744 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_53872 0 0 1 YBX3 POSTAR2 ENCODE chr6:52268687-52268758
64251 chr20 47851569 47851569 1 + G T LUAD 47851567 + 47851547 47851587 41 TCCTCCTGGGGCTCATGGGGCTGCAGGTGGGTGAGCTCCAT TCCTCCTGGGGCTCATGGGGCTTCAGGTGGGTGAGCTCCAT < 41bp 0.804985934347569 0.495268312395199 0.5285608 0.42296302 prediction 0.609971868695139 Functional Loss - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47851567 chr20:47851569 synonymous SNV . 0 23 hm5C_associated_SNPs_53873 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585668 chr20:47851542-47851569
64251 chr19 30936461 30936461 1 + G T COAD 30936459 + 30936439 30936479 41 GCAAGGGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAG GCAAGGGCGAGGAGGATGGGCTTCACGTGGGCCTGGATGAG < 41bp 0.804956351793176 0.488915928605079 0.47766608 0.5031028 prediction 0.609912703586353 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936459 chr19:30936461 synonymous SNV . 0 23 hm5C_associated_SNPs_53877 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30936449-30936501
64251 chr19 58265931 58265931 1 + A C LUSC 58265927 + 58265907 58265947 41 ATCAAAAGGGCAGTCTCATTCGACATCAGCAGATTCACTCT ATCAAAAGGGCAGTCTCATTCGACCTCAGCAGATTCACTCT < 41bp 0.804955456832135 0.418486269506084 0.2894819 0.36386514 prediction 0.60991091366427 Functional Loss - ZNF776 ENSG00000152443 CDS Human protein_coding chr19:58265927 chr19:58265931 nonsynonymous SNV 0.006 4 25 hm5C_associated_SNPs_53878 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:58265901-58265933
64251 chr16 21245128 21245128 1 + G T COAD 21245125 + 21245105 21245145 41 TTCTAAAAGAGGCTACCAAGCGAGATCTAAATCTTTCGGAT TTCTAAAAGAGGCTACCAAGCGATATCTAAATCTTTCGGAT < 41bp 0.870470484931812 0.565518242187791 0.7667225 0.28976852 prediction 0.609904485488042 Functional Loss - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21245125 chr16:21245128 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_53879 0 0 2 BUD13 POSTAR2 ENCODE chr16:21245118-21245216
64251 chr1 206611390 206611390 1 + G T STAD 206611388 + 206611368 206611408 41 GTGTCCTGAAGCTTTACTTCCGGGGGCTGGAACACCCTCTC GTGTCCTGAAGCTTTACTTCCGTGGGCTGGAACACCCTCTC < 41bp 0.804946589731388 0.476113651746852 0.9454127 0.90589875 prediction 0.609893179462775 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206611388 chr1:206611390 synonymous SNV . 0 23 hm5C_associated_SNPs_53880 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:206611384-206611422
64251 chr4 20599947 20599947 1 + G T LUSC 20599944 + 20599924 20599964 41 AAGGGTGACAAAGACCATATCGCGGTAGAACTCTATCGGGG AAGGGTGACAAAGACCATATCGCTGTAGAACTCTATCGGGG < 41bp 0.80491934900611 0.45285023615888 0.48472825 0.01754874 prediction 0.60983869801222 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20599944 chr4:20599947 synonymous SNV . 0 24 hm5C_associated_SNPs_53883 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:20599941-20599969
64251 chr16 30409152 30409152 1 + G T LUAD 30409150 + 30409130 30409170 41 GCTGGTGAGCGCCCCACTATCTGTGGTGAATGTGGCAAGAG GCTGGTGAGCGCCCCACTATCTTTGGTGAATGTGGCAAGAG < 41bp 0.804917176364019 0.493581128243969 0.6937748 0.3207063 prediction 0.609834352728038 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409150 chr16:30409152 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_53884 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr16:30409147-30409168
64251 chr6 96034716 96034716 1 + G T LUAD 96034713 + 96034693 96034733 41 AGTGTTAGAGCATTGGGACCCTAGAATAGCCAAGAATTATC AGTGTTAGAGCATTGGGACCCTATAATAGCCAAGAATTATC < 41bp 0.845628272195797 0.540711469328775 0.44307745 0.9333511 prediction 0.609833605734044 Functional Loss - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034713 chr6:96034716 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_53885 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:96034700-96034720
64251 chr17 40935987 40935987 1 + G T UCEC 40935984 + 40935964 40936004 41 GCGGTTCCGGGAGATGAAGCCGCGGGTCCTTCAGCGCTGGA GCGGTTCCGGGAGATGAAGCCGCTGGTCCTTCAGCGCTGGA < 41bp 0.886500569759201 0.581585955411913 0.9221642 0.87240195 prediction 0.609829228694576 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40935984 chr17:40935987 nonsynonymous SNV 0.945 2 24 hm5C_associated_SNPs_53886 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40935980-40936000
64251 chr8 26441374 26441374 1 + G T LUAD 26441372 + 26441352 26441392 41 AAGACCATCGAGGCCCACTCCCGGATGGTGATCCCCGGAGG AAGACCATCGAGGCCCACTCCCTGATGGTGATCCCCGGAGG < 41bp 0.843817798637324 0.538929191001988 0.90340185 0.22443652 prediction 0.609777215270672 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26441372 chr8:26441374 nonsynonymous SNV 0.985 2 23 hm5C_associated_SNPs_53890 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:26441354-26441378
64251 chr19 46198725 46198725 1 + G T LUAD 46198723 + 46198703 46198743 41 GGCCACGCTGCGGTCCCTGACAGCAGGTTGGCACGTGGAGC GGCCACGCTGCGGTCCCTGACATCAGGTTGGCACGTGGAGC < 41bp 0.843498799362797 0.538624494215781 0.36361998 0.15250933 prediction 0.609748610294033 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198723 chr19:46198725 nonsynonymous SNV 0.628 1 23 hm5C_associated_SNPs_53892 0 0 2 DDX59 POSTAR2 ENCODE chr19:46198669-46198730
64251 chr15 66994822 66994822 1 + G T rs558891070 66994820 + 66994800 66994840 41 GCGCACGAAGCGTCCGAGGGCAGCGTGGGGCGGGCTGCGAC GCGCACGAAGCGTCCGAGGGCATCGTGGGGCGGGCTGCGAC < 41bp 0.826242105863269 0.521380549053902 0.8811549 0.83884794 prediction 0.609723113618734 Functional Loss - SMAD6 ENSG00000137834 UTR5 Human protein_coding chr15:66994820 chr15:66994822 . . 0 23 hm5C_associated_SNPs_53893 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:66994806-66994842
64251 chr8 66619324 66619324 1 + G T BLCA 66619322 + 66619302 66619342 41 CGCCCCTGCCTCCCCCTGCACTGGGGCTCCACCAAAGTACA CGCCCCTGCCTCCCCCTGCACTTGGGCTCCACCAAAGTACA < 41bp 0.851033875369892 0.546188806344429 0.11417198 0.019317895 prediction 0.609690138050926 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66619322 chr8:66619324 synonymous SNV . 0 23 hm5C_associated_SNPs_53896 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:66619273-66619334
64251 chr17 78082517 78082517 1 + G T LUAD 78082514 + 78082494 78082534 41 AGGACGTCCAGTGGAACGACCTGGACTACATGGACTCCCGG AGGACGTCCAGTGGAACGACCTGTACTACATGGACTCCCGG < 41bp 0.804842421020674 0.420355337855361 0.31587115 0.15717667 prediction 0.609684842041348 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78082514 chr17:78082517 nonsynonymous SNV 0.903 5 24 hm5C_associated_SNPs_53898 0 0 1 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:78082507-78082545
64251 chr10 98744424 98744424 1 + G T COAD 98744422 + 98744402 98744442 41 TCAGAGTAAACGCAAGAGAACAGAAGGCAGCAGCCCTCCAG TCAGAGTAAACGCAAGAGAACATAAGGCAGCAGCCCTCCAG < 41bp 0.804807105567679 0.489245620591152 0.35868096 0.16854948 prediction 0.609614211135357 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98744422 chr10:98744424 stopgain 0.763 0 23 hm5C_associated_SNPs_53902 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:98744424-98744425
64251 chr17 34172014 34172014 1 + G T KIRP 34172011 + 34171991 34172031 41 GTGGGGGCTACGGAGGAGACCGAGGTGGCTATGGAGGCAAA GTGGGGGCTACGGAGGAGACCGATGTGGCTATGGAGGCAAA < 41bp 0.876632068153188 0.571839724898413 0.9065416 0.21234015 prediction 0.609584686509549 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34172011 chr17:34172014 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_53904 0 0 42 RBPMS POSTAR2 SRX484627 chr17:34171920-34172020
64251 chr14 70235955 70235955 1 + G T UCEC 70235952 + 70235932 70235972 41 TATAGTTGAGAATTTATCCTCAAGAGTCAGCTGGCAGGTTT TATAGTTGAGAATTTATCCTCAATAGTCAGCTGGCAGGTTT < 41bp 0.804762340043983 0.452269899208342 0.4202258 0.061175227 prediction 0.609524680087967 Functional Loss - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235952 chr14:70235955 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53905 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:70235830-70235968
64251 chr2 219292775 219292775 1 + G T LGG 219292772 + 219292752 219292792 41 AGGCTGCTGCATGTCAAGGGCAAGAGGAACGTGGTAGCTGG AGGCTGCTGCATGTCAAGGGCAATAGGAACGTGGTAGCTGG < 41bp 0.804758201475623 0.429049599708573 0.7476916 0.43334895 prediction 0.609516402951245 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292772 chr2:219292775 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53906 0 0 3 PPIG POSTAR2 ENCODE chr2:219292734-219292785
64251 chr1 92495728 92495728 1 + G T SARC 92495726 + 92495706 92495746 41 GTCTACTGCTACTGCGGGCTCTGCGCCTCCATCCACCTGCT GTCTACTGCTACTGCGGGCTCTTCGCCTCCATCCACCTGCT < 41bp 0.826711111606331 0.521954503590731 0.054116637 0.010607868 prediction 0.6095132160312 Functional Loss - EPHX4 ENSG00000172031 CDS Human protein_coding chr1:92495726 chr1:92495728 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_53907 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:92495712-92495750
64251 chr12 2910444 2910444 1 + G T PRAD 2910442 + 2910422 2910462 41 CCCAGCTGGCTGTGTGCCAGCAGCGGATCCGAAGGCAGCTT CCCAGCTGGCTGTGTGCCAGCATCGGATCCGAAGGCAGCTT < 41bp 0.839936671165039 0.535207745912373 0.8805414 0.287709 prediction 0.609457850505333 Functional Loss - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2910442 chr12:2910444 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_53911 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:2910442-2910473
64251 chr11 61545865 61545865 1 + G T GBM 61545863 + 61545843 61545883 41 TGCCCCCAGGTGTCATCGCTCAGGAGGTGAAGGAGATCTTG TGCCCCCAGGTGTCATCGCTCATGAGGTGAAGGAGATCTTG < 41bp 0.847443848252669 0.542724343620832 0.93242085 0.3984114 prediction 0.609439009263675 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61545863 chr11:61545865 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_53914 0 0 5 GRWD1 POSTAR2 ENCODE chr11:61545859-61545937
64251 chr1 38260262 38260262 1 + G T KIRC 38260259 + 38260239 38260279 41 ATGGTGCCGCACTGGGACCCCAAGATCTCGGCCAGCTACCC ATGGTGCCGCACTGGGACCCCAATATCTCGGCCAGCTACCC < 41bp 0.877941133356996 0.573244028037484 0.23788404 0.116850615 prediction 0.609394210639023 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38260259 chr1:38260262 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53916 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:38260235-38260273
64251 chr2 27282252 27282252 1 + G T UCEC 27282250 + 27282230 27282270 41 AGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCCCGTCAG AGTACCCAAAAGGTCACCCACCTGGTGCTGGGCCCCGTCAG < 41bp 0.841075316422693 0.536378260459493 0.90747094 0.37358496 prediction 0.609394111926401 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282250 chr2:27282252 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_53917 0 0 2 YBX3 POSTAR2 ENCODE chr2:27282242-27282280
64251 chr20 43566815 43566815 1 + G T UCEC 43566813 + 43566793 43566833 41 GTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAGG GTTGCTCATGCTGGAGTCTCCATAATCCCTCCATGCCAAGG < 41bp 0.804693299025028 0.475517137233397 0.5000251 0.04267952 prediction 0.609386598050057 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566813 chr20:43566815 stopgain 0.998 1 23 hm5C_associated_SNPs_53918 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:43566781-43566824
64251 chr6 117890851 117890851 1 - C A LUAD 117890853 - 117890833 117890873 41 CCTCATCTCTGAGATCCATCCGGGGCAACCTGCTGATAGAT CCTCATCTCTGAGATCCATCCGTGGCAACCTGCTGATAGAT < 41bp 0.831758333646301 0.527079203212058 0.946409 0.35068232 prediction 0.609358260868485 Functional Loss - GOPC ENSG00000047932 CDS Human protein_coding chr6:117890853 chr6:117890851 nonsynonymous SNV 0.600 4 23 hm5C_associated_SNPs_53921 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:117890822-117890863
64251 chr14 39583561 39583561 1 + G T BLCA 39583559 + 39583539 39583579 41 AACCATGGCGTGGGTACCAGCGGAGTCCGCAGTGGAAGAGT AACCATGGCGTGGGTACCAGCGTAGTCCGCAGTGGAAGAGT < 41bp 0.804671026354682 0.473802831297683 0.8954446 0.43819833 prediction 0.609342052709364 Functional Loss - GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39583559 chr14:39583561 stopgain 0.329 1 23 hm5C_associated_SNPs_53923 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:39583546-39583582
64251 chrX 48678561 48678561 1 + G T HNSC 48678558 + 48678538 48678578 41 CAGCTGGCTTTGATGCTGCACGGGGGGATCCGCTGGGGGGC CAGCTGGCTTTGATGCTGCACGGTGGGATCCGCTGGGGGGC < 41bp 0.884056992571582 0.579388162789867 0.9128598 0.8551965 prediction 0.60933765956343 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678558 chrX:48678561 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_53924 0 0 3 EIF3H POSTAR2 ENCODE chrX:48678530-48678610
64251 chr2 27016114 27016114 1 + G T LUAD 27016111 + 27016091 27016131 41 CCAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTGA CCAAAGGATGTGCAACTGGCCCGTAGGATCCGGGGCCTTGA < 41bp 0.876615240565821 0.571954869564062 0.46009743 0.050269514 prediction 0.609320742003517 Functional Loss - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016111 chr2:27016114 synonymous SNV . 0 24 hm5C_associated_SNPs_53925 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:27016094-27016116
64251 chr5 169506025 169506025 1 + G T LUAD 169506022 + 169506002 169506042 41 CCAAGACGCCGAGAGTGGAGCAGGAGGAACCGATCTCCCCG CCAAGACGCCGAGAGTGGAGCAGTAGGAACCGATCTCCCCG < 41bp 0.861583704980888 0.556945110597751 0.89749104 0.6533425 prediction 0.609277188766274 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169506022 chr5:169506025 stopgain 0.638 0 24 hm5C_associated_SNPs_53926 0 0 3 FMR1 POSTAR2 ENCODE chr5:169506019-169506066
64251 chr15 52497116 52497116 1 - T G OV 52497120 - 52497100 52497140 41 TCTTGATCGGGGCGGTCACGCTGAACAGCCTCTTCCTGCGC TCTTGATCGGGGCGGTCACGCTGACCAGCCTCTTCCTGCGC < 41bp 0.804630359294864 0.412275630373796 0.23107368 0.22828957 prediction 0.609260718589728 Functional Loss - MYO5C ENSG00000128833 CDS Human protein_coding chr15:52497120 chr15:52497116 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_53927 0 0 1 PPIG POSTAR2 ENCODE chr15:52497066-52497121
64251 chr1 248059095 248059095 1 + G T KIRC 248059093 + 248059073 248059113 41 TCCTCGCCCACCTTTCCTTCCTGGACCTCAGTTTCACCACC TCCTCGCCCACCTTTCCTTCCTTGACCTCAGTTTCACCACC < 41bp 0.80462510066511 0.475683523675815 0.20720541 0.082071215 prediction 0.60925020133022 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059093 chr1:248059095 synonymous SNV . 0 23 hm5C_associated_SNPs_53928 0 0 1 METAP2 POSTAR2 ENCODE chr1:248059067-248059146
64251 chr19 49377723 49377723 1 + G T UCEC 49377720 + 49377700 49377740 41 GACAGTGATACAGGATCAGCCGAGGATGAAAGAGAAGCTGA GACAGTGATACAGGATCAGCCGATGATGAAAGAGAAGCTGA < 41bp 0.804621077621438 0.431517908864689 0.5421124 0.43691522 prediction 0.609242155242876 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377720 chr19:49377723 nonsynonymous SNV 0.559 2 24 hm5C_associated_SNPs_53930 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:49377694-49377727
64251 chr9 129643116 129643116 1 + G T COAD 129643113 + 129643093 129643133 41 ATGTGTACGTGGAACAGAAACTAGAAAATGACGCATCGGCC ATGTGTACGTGGAACAGAAACTATAAAATGACGCATCGGCC < 41bp 0.804535859306406 0.450800440782741 0.39365926 0.20994198 prediction 0.609071718612811 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129643113 chr9:129643116 stopgain 0.999 1 24 hm5C_associated_SNPs_53937 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:129643100-129643120
64251 chr9 131348125 131348125 1 + G T BLCA 131348122 + 131348102 131348142 41 CTTCCCAGCGTCGGCAGGACCTGGAGGACTCTCTGCAGGCC CTTCCCAGCGTCGGCAGGACCTGTAGGACTCTCTGCAGGCC < 41bp 0.804534520155431 0.462822549835788 0.42144138 0.11404383 prediction 0.609069040310862 Functional Loss - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131348122 chr9:131348125 stopgain 0.999 1 24 hm5C_associated_SNPs_53938 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:131348111-131348132
64251 chr1 110584264 110584264 1 + G T BRCA 110584261 + 110584241 110584281 41 GGCAGACCTTCAGAGCCGAGCTGGGTAGGACCCTGGGGATC GGCAGACCTTCAGAGCCGAGCTGTGTAGGACCCTGGGGATC < 41bp 0.885700325073446 0.581171430609301 0.6475788 0.24513832 prediction 0.609057788928291 Functional Loss - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110584261 chr1:110584264 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_53940 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110584253-110584280
64251 chr14 76948393 76948393 1 + G T UCEC 76948391 + 76948371 76948411 41 ATCGAGTGCGTGGAGGCCGTCAGAAATACAAGCGACGGCTG ATCGAGTGCGTGGAGGCCGTCATAAATACAAGCGACGGCTG < 41bp 0.804522270936298 0.467746973210432 0.40796053 0.051314384 prediction 0.609044541872596 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76948391 chr14:76948393 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_53941 0 0 5 DDX24 POSTAR2 ENCODE chr14:76948356-76948395
64251 chr12 54403232 54403232 1 + A C COAD 54403228 + 54403208 54403248 41 CCGGCTTCCAGCACGCTTCGCACCACGTTCAAGACTTCTTC CCGGCTTCCAGCACGCTTCGCACCCCGTTCAAGACTTCTTC < 41bp 0.804499208275835 0.411304531169922 0.09143001 0.07983002 prediction 0.60899841655167 Functional Loss - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54403228 chr12:54403232 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_53945 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:54403230-54403268
64251 chrX 11130235 11130235 1 + G T SARC 11130233 + 11130213 11130253 41 AGTTCAGGCCTCAAATGCTTCAGCGTCCCCACCTTCAGGAT AGTTCAGGCCTCAAATGCTTCATCGTCCCCACCTTCAGGAT < 41bp 0.80449108033674 0.466876594653476 0.029274046 0.0018041432 prediction 0.60898216067348 Functional Loss - HCCS ENSG00000004961 CDS Human protein_coding chrX:11130233 chrX:11130235 nonsynonymous SNV 0.799 1 23 hm5C_associated_SNPs_53946 0 0 2 DDX3X POSTAR2 ENCODE chrX:11130169-11130274
64251 chr20 30363769 30363769 1 + G T UCEC 30363766 + 30363746 30363786 41 CGGAAAAAGAATGAAGAATTCAAGAAACTTGCTCTGGCTGG CGGAAAAAGAATGAAGAATTCAATAAACTTGCTCTGGCTGG < 41bp 0.877330479312518 0.572839770291259 0.8902061 0.40254933 prediction 0.608981418042518 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30363766 chr20:30363769 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_53947 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:30363761-30363782
64251 chr3 101573504 101573504 1 + G T KIRC 101573501 + 101573481 101573521 41 AGATGAATGCACTTCACATGCTGGATATTAAAGAGCACAAT AGATGAATGCACTTCACATGCTGTATATTAAAGAGCACAAT < 41bp 0.87375844175744 0.569293759764455 0.25051373 0.13372415 prediction 0.60892936398597 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101573501 chr3:101573504 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_53949 0 0 5 BUD13 POSTAR2 ENCODE chr3:101573487-101573525
64251 chr1 150900289 150900289 1 + G T LUSC 150900287 + 150900267 150900307 41 AACAGGCAGTGGTTGAGGAACTGGGTATCTCTATGGAGGAA AACAGGCAGTGGTTGAGGAACTTGGTATCTCTATGGAGGAA < 41bp 0.817612468183716 0.513156815476985 0.3378074 0.12645203 prediction 0.608911305413462 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150900287 chr1:150900289 synonymous SNV . 0 23 hm5C_associated_SNPs_53950 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:150900234-150900308
64251 chr20 48558130 48558130 1 + A C UCEC 48558126 + 48558106 48558146 41 CTGCATGCCTGCAGGAATGTCTGAAGCCGAAGAAGCCTGTC CTGCATGCCTGCAGGAATGTCTGACGCCGAAGAAGCCTGTC < 41bp 0.899982199201536 0.595554404276941 0.3224747 0.15784752 prediction 0.608855589849191 Functional Loss - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48558126 chr20:48558130 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_53956 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:48558081-48558181
64251 chr12 6647116 6647116 1 + G T BLCA 6647114 + 6647094 6647134 41 CCACTCCTCCACCTTTGACGCTGGGGCTGGCATTGCCCTCA CCACTCCTCCACCTTTGACGCTTGGGCTGGCATTGCCCTCA < 41bp 0.804417061191692 0.476620289783866 0.6947758 0.09224889 prediction 0.608834122383384 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647114 chr12:6647116 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_53958 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:6646999-6647137
64251 chr17 45299181 45299181 1 + G T LUAD 45299178 + 45299158 45299198 41 TTTGACAAGGAGAGCAATGGCACGGTCATGGGTGCTGAGCT TTTGACAAGGAGAGCAATGGCACTGTCATGGGTGCTGAGCT < 41bp 0.888744810014635 0.584349319116269 0.7729732 0.40523577 prediction 0.608790981796733 Functional Loss - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45299178 chr17:45299181 synonymous SNV . 0 24 hm5C_associated_SNPs_53960 0 0 4 DDX6 POSTAR2 ENCODE chr17:45299174-45299220
64251 chr19 35758461 35758461 1 + A T LUAD 35758457 + 35758437 35758477 41 CGGGACCCTCGGGACAACGGCTCCAGGTCCGGGGACCTCCC CGGGACCCTCGGGACAACGGCTCCTGGTCCGGGGACCTCCC < 41bp 0.804393876575095 0.484418324630506 0.91025776 0.08354056 prediction 0.608787753150191 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35758457 chr19:35758461 nonsynonymous SNV 0.161 3 25 hm5C_associated_SNPs_53961 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35758456-35758496
64251 chr2 27659661 27659661 1 + G T LUSC 27659658 + 27659638 27659678 41 ACAATCATGTGAAGACTTGTCGAGAAGAGCAGAAGAATCTA ACAATCATGTGAAGACTTGTCGATAAGAGCAGAAGAATCTA < 41bp 0.874746221438486 0.570363624355893 0.12924826 0.07032579 prediction 0.608765194165185 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27659658 chr2:27659661 stopgain 1.000 1 24 hm5C_associated_SNPs_53962 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:27659632-27659670
64251 chr12 14927761 14927761 1 + G T UCEC 14927758 + 14927738 14927778 41 ATCCAGGCCGTGCTGCTGCCCAAGAAGACGGAGAGTCAGAA ATCCAGGCCGTGCTGCTGCCCAATAAGACGGAGAGTCAGAA < 41bp 0.865110611453479 0.560751862716927 0.2564482 0.09035677 prediction 0.608717497473105 Functional Loss - H2AFJ ENSG00000246705 CDS Human protein_coding chr12:14927758 chr12:14927761 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_53964 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:14927745-14927776
64251 chr1 201839752 201839752 1 + G T LUSC 201839750 + 201839730 201839770 41 GGGCCTATGTGTCAGTGACCCTGGAACAAGTAGCCCAGTGG GGGCCTATGTGTCAGTGACCCTTGAACAAGTAGCCCAGTGG < 41bp 0.804334500939489 0.488146235071656 0.5515225 0.19143829 prediction 0.608669001878978 Functional Loss - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201839750 chr1:201839752 synonymous SNV . 0 23 hm5C_associated_SNPs_53967 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:201839712-201839756
64251 chr16 3706754 3706754 1 + G T STAD 3706752 + 3706732 3706772 41 CAGGTTCTTCTCCCGGTTCACAGGTGGGTGCTGCCTGGGCC CAGGTTCTTCTCCCGGTTCACATGTGGGTGCTGCCTGGGCC < 41bp 0.848027322249483 0.543704444791143 0.9080499 0.6755292 prediction 0.608645754916681 Functional Loss - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3706752 chr16:3706754 stopgain 0.105 0 23 hm5C_associated_SNPs_53968 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:3706724-3706754
64251 chr9 140446689 140446689 1 + G T COAD 140446687 + 140446667 140446707 41 CCTCGGGCTGGAGGTTCGTGCAGATCAAGGAGATGGTCCCG CCTCGGGCTGGAGGTTCGTGCATATCAAGGAGATGGTCCCG < 41bp 0.804284417678245 0.490813834317207 0.31567234 0.21639544 prediction 0.608568835356489 Functional Loss - MRPL41 ENSG00000182154 CDS Human protein_coding chr9:140446687 chr9:140446689 nonsynonymous SNV 0.126 1 23 hm5C_associated_SNPs_53971 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:140446657-140446689
64251 chr2 103414427 103414427 1 + A T LUAD 103414423 + 103414403 103414443 41 CCCCCTTCGCCAGCCATTTTCTCTACAAAGCTGGGGGAGGC CCCCCTTCGCCAGCCATTTTCTCTTCAAAGCTGGGGGAGGC < 41bp 0.834980442415587 0.530696092305622 0.8726683 0.2977789 prediction 0.60856870021993 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103414423 chr2:103414427 nonsynonymous SNV 0.700 1 25 hm5C_associated_SNPs_53972 0 0 1 PRPF8 POSTAR2 ENCODE chr2:103414420-103414498
64251 chr13 115057172 115057172 1 + G T BLCA 115057169 + 115057149 115057189 41 AGTTAGAAAAGAAACGTTTGCGGGAAGAGGAAAAAAGAAGA AGTTAGAAAAGAAACGTTTGCGGTAAGAGGAAAAAAGAAGA < 41bp 0.859913171117899 0.555628998941475 0.8491815 0.5825451 prediction 0.608568344352848 Functional Loss - UPF3A ENSG00000169062 CDS Human protein_coding chr13:115057169 chr13:115057172 stopgain 0.194 0 24 hm5C_associated_SNPs_53973 0 0 7 BUD13 POSTAR2 ENCODE chr13:115057165-115057238
64251 chr11 249047 249047 1 + G T LUAD 249045 + 249025 249065 41 TTCCAGACTCTGAAGACTGCCTGGGGCCAGCAGGTAGGACT TTCCAGACTCTGAAGACTGCCTTGGGCCAGCAGGTAGGACT < 41bp 0.804275244207468 0.480094745359048 0.62305886 0.09254789 prediction 0.608550488414936 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:249045 chr11:249047 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_53974 0 0 4 PPIG POSTAR2 ENCODE chr11:248998-249057
64251 chr3 179503849 179503849 1 + G T rs116718754 179503847 + 179503827 179503867 41 TGGCAGAAGGAGGGAGCTCACGGTGCAGTACTTTTCTACCA TGGCAGAAGGAGGGAGCTCACGTTGCAGTACTTTTCTACCA < 41bp 0.806272716364264 0.502003255974503 0.90076256 0.7788859 prediction 0.608538920779522 Functional Loss - USP13 ENSG00000058056 UTR3 Human protein_coding chr3:179503847 chr3:179503849 . . 0 23 hm5C_associated_SNPs_53976 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:179503824-179503854
64251 chr9 138011751 138011751 1 + G T LUSC 138011748 + 138011728 138011768 41 CAGACCCTGCAGACCTGGAACACGAGCTACCCCAAGCGCAG CAGACCCTGCAGACCTGGAACACTAGCTACCCCAAGCGCAG < 41bp 0.882816448873445 0.578580900277768 0.15726918 0.06171772 prediction 0.608471097191355 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011748 chr9:138011751 synonymous SNV . 0 24 hm5C_associated_SNPs_53979 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:138011730-138011791
64251 chr11 62505798 62505798 1 + G T GBM 62505796 + 62505776 62505816 41 GTACCTCCAGCTGACACAGTCAGAACTCAGCAGCTACCATA GTACCTCCAGCTGACACAGTCATAACTCAGCAGCTACCATA < 41bp 0.811231175237724 0.507008105235544 0.8239151 0.34113508 prediction 0.608446140004361 Functional Loss - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62505796 chr11:62505798 stopgain 0.996 0 23 hm5C_associated_SNPs_53981 0 0 2 BUD13 POSTAR2 ENCODE chr11:62505726-62505802
64251 chr19 37618194 37618194 1 + G T UCEC 37618191 + 37618171 37618211 41 AAGGCAAGATGGAGAAGCAACAAGAAAATCAGAAGGAATAT AAGGCAAGATGGAGAAGCAACAATAAAATCAGAAGGAATAT < 41bp 0.863096682890487 0.558956426352333 0.7433374 0.3755569 prediction 0.608280513076309 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618191 chr19:37618194 stopgain 0.955 0 24 hm5C_associated_SNPs_53986 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:37618164-37618194
64251 chrX 102841694 102841694 1 + G T UCEC 102841691 + 102841671 102841711 41 AGCCACAAGACGAGAGAAAGCCAGAAGTAACTTGTACTCTG AGCCACAAGACGAGAGAAAGCCATAAGTAACTTGTACTCTG < 41bp 0.804134535077392 0.451016526529372 0.8726649 0.4130221 prediction 0.608269070154784 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841691 chrX:102841694 stopgain 0.986 0 24 hm5C_associated_SNPs_53987 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:102841598-102841697
64251 chr9 117400890 117400890 1 + G T PRAD 117400888 + 117400868 117400908 41 GACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTGAGAACT GACTGGGGTGAGCCCTGCAACATCGGAGGGGCCTGAGAACT < 41bp 0.841112716037896 0.536985700622852 0.8509767 0.8334255 prediction 0.608254030830088 Functional Loss - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117400888 chr9:117400890 nonsynonymous SNV 0.063 0 23 hm5C_associated_SNPs_53988 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:117400862-117400907
64251 chr19 1220706 1220706 1 + G T LUAD 1220704 + 1220684 1220724 41 CAAGGTGGACATCTGGTCGGCTGGGGTCACCCTGTAAGTGC CAAGGTGGACATCTGGTCGGCTTGGGTCACCCTGTAAGTGC < 41bp 0.804109735248092 0.480827478882028 0.87501097 0.70037025 prediction 0.608219470496183 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220704 chr19:1220706 nonsynonymous SNV 0.936 5 23 hm5C_associated_SNPs_53989 1 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1220680-1220707
64251 chr19 1220707 1220707 1 + G T LUAD 1220704 + 1220684 1220724 41 CAAGGTGGACATCTGGTCGGCTGGGGTCACCCTGTAAGTGC CAAGGTGGACATCTGGTCGGCTGTGGTCACCCTGTAAGTGC < 41bp 0.804109735248092 0.42764152104101 0.87501097 0.18995634 prediction 0.608219470496183 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220704 chr19:1220707 nonsynonymous SNV 0.965 5 24 hm5C_associated_SNPs_53990 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1220680-1220707
64251 chr19 10398390 10398390 1 + G T UCEC 10398387 + 10398367 10398407 41 ACCGGCCTGGATCTGGCCAACGTGACCTTGACCTACGAGTT ACCGGCCTGGATCTGGCCAACGTTACCTTGACCTACGAGTT < 41bp 0.804108362905745 0.428177756783914 0.25589836 0.0866327 prediction 0.60821672581149 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398387 chr19:10398390 nonsynonymous SNV 0.176 3 24 hm5C_associated_SNPs_53991 0 0 1 SND1 POSTAR2 ENCODE chr19:10398355-10398393
64251 chr11 64876905 64876905 1 + G T LUSC 64876902 + 64876882 64876922 41 TGCTGCTCTCCCGCCTCTGCCTGGACTACGAGACGGCCACC TGCTGCTCTCCCGCCTCTGCCTGTACTACGAGACGGCCACC < 41bp 0.880322723355609 0.576253447495883 0.91711164 0.29946208 prediction 0.608138551719453 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64876902 chr11:64876905 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_53992 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr11:64876850-64876905
64251 chr11 94278541 94278541 1 + G T UCEC 94278538 + 94278518 94278558 41 TACAAGTTCTACCTGGCTTTCGAGAACTCGCAGCACCTGGA TACAAGTTCTACCTGGCTTTCGATAACTCGCAGCACCTGGA < 41bp 0.804050861799036 0.437369151093731 0.901876 0.10458246 prediction 0.608101723598072 Functional Loss - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94278538 chr11:94278541 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_53995 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:94278531-94278555
64251 chr12 7045138 7045138 1 + G T COAD 7045135 + 7045115 7045155 41 TCTGGACCCCCAATGGGTCCCAAGGGGGGAGGGGCTGCCTC TCTGGACCCCCAATGGGTCCCAATGGGGGAGGGGCTGCCTC < 41bp 0.892615995907454 0.588592635928631 0.89669025 0.37392914 prediction 0.608046719957646 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045135 chr12:7045138 nonsynonymous SNV 0.138 1 24 hm5C_associated_SNPs_53997 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:7045080-7045160
64251 chr18 72173173 72173173 1 + G T rs138391233 72173170 + 72173150 72173190 41 AAGAAGACCGTGTGCATTTACGGGCACCTGGATGTGCAGCC AAGAAGACCGTGTGCATTTACGGTCACCTGGATGTGCAGCC < 41bp 0.803995081800403 0.423400525689469 0.8880519 0.23318991 prediction 0.607990163600805 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72173170 chr18:72173173 synonymous SNV . 0 24 hm5C_associated_SNPs_54000 0 0 2 UCHL5 POSTAR2 ENCODE chr18:72173164-72173250
64251 chr19 3612061 3612061 1 - C A LUSC 3612063 - 3612043 3612083 41 CGCCATCCTGCGCTTCCACGCGGGGCCGCCCTACGAGGACA CGCCATCCTGCGCTTCCACGCGTGGCCGCCCTACGAGGACA < 41bp 0.8319376737674 0.527947370326195 0.9502904 0.91339827 prediction 0.60798060688241 Functional Loss - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612063 chr19:3612061 nonsynonymous SNV 0.003 4 23 hm5C_associated_SNPs_54001 0 0 3 RBM15 POSTAR2 ENCODE chr19:3612038-3612086
64251 chr2 74730700 74730700 1 + G T rs370661627 74730697 + 74730677 74730717 41 CTCCCCAGCTCCCGCAGCTGCTCGGTCCCTGCAAAGCCCCC CTCCCCAGCTCCCGCAGCTGCTCTGTCCCTGCAAAGCCCCC < 41bp 0.803987255761799 0.446714496091022 0.27098244 0.0866898 prediction 0.607974511523597 Functional Loss - LBX2-AS1 ENSG00000257702 ncRNA_exonic Human antisense chr2:74730697 chr2:74730700 . . 0 24 hm5C_associated_SNPs_54002 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:74730684-74730707
64251 chr14 93673649 93673649 1 + G T PAAD 93673647 + 93673627 93673667 41 ACAGTTGAGGATGGCCGGAGCCGAGGGCGCCGCTGGGCGGC ACAGTTGAGGATGGCCGGAGCCTAGGGCGCCGCTGGGCGGC < 41bp 0.849212683001308 0.545255572552044 0.9123268 0.8429111 prediction 0.607914220898527 Functional Loss - UBR7 ENSG00000012963 CDS Human protein_coding chr14:93673647 chr14:93673649 stopgain 0.031 0 23 hm5C_associated_SNPs_54005 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93673627-93673669
64251 chr1 89990471 89990471 1 + G T rs575892058 89990469 + 89990449 89990489 41 GCCGGGGCTTCCCGCTGAGCCCGCAGCCTCCGGCAGCCGGG GCCGGGGCTTCCCGCTGAGCCCTCAGCCTCCGGCAGCCGGG < 41bp 0.816158135985551 0.51220690139819 0.4311243 0.15576917 prediction 0.607902469174723 Functional Loss - LRRC8B ENSG00000197147 UTR5 Human protein_coding chr1:89990469 chr1:89990471 . . 0 23 hm5C_associated_SNPs_54006 0 0 5 DDX3X POSTAR2 ENCODE chr1:89990467-89990582
64251 chr1 9416202 9416202 1 + G T LUAD 9416199 + 9416179 9416219 41 CGGCATCCGGTGGCCCAGAGCACGGACGCTATCAGGGGCAA CGGCATCCGGTGGCCCAGAGCACTGACGCTATCAGGGGCAA < 41bp 0.803905581124918 0.418698477969085 0.50333434 0.35288665 prediction 0.607811162249835 Functional Loss - SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416199 chr1:9416202 synonymous SNV . 0 24 hm5C_associated_SNPs_54014 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:9416198-9416253
64251 chr7 65553849 65553849 1 + G T UCEC 65553846 + 65553826 65553866 41 ACCCATCTCAGCAGGATGGCCGAGGACCTCATCCTCTACTG ACCCATCTCAGCAGGATGGCCGATGACCTCATCCTCTACTG < 41bp 0.803895789191067 0.41679251667064 0.4670319 0.12880862 prediction 0.607791578382135 Functional Loss - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65553846 chr7:65553849 nonsynonymous SNV 0.989 5 24 hm5C_associated_SNPs_54018 0 0 7 BUD13 POSTAR2 ENCODE chr7:65553799-65553869
64251 chr12 133758594 133758594 1 + G T UCEC 133758592 + 133758572 133758612 41 CTGACCGTAGGGATGGCCACCAGGGTCCGGACAGCTTCTAT CTGACCGTAGGGATGGCCACCATGGTCCGGACAGCTTCTAT < 41bp 0.804490107485118 0.500603354583717 0.4837222 0.028515667 prediction 0.607773505802802 Functional Loss - ZNF268 ENSG00000090612;ENSG00000256825 CDS Human other chr12:133758592 chr12:133758594 nonsynonymous SNV 0.774 1 23 hm5C_associated_SNPs_54020 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:133758567-133758605
64251 chr6 130415512 130415512 1 + G T UCEC 130415510 + 130415490 130415530 41 GCGAGACATCTGGGCCCTCACAGGTATGTGGTAGCTGTCAC GCGAGACATCTGGGCCCTCACATGTATGTGGTAGCTGTCAC < 41bp 0.828973027931361 0.525098290323088 0.74433327 0.41739464 prediction 0.607749475216546 Functional Loss - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130415510 chr6:130415512 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_54022 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:130415490-130415512
64251 chr3 44672589 44672589 1 + G T UCEC 44672586 + 44672566 44672606 41 GTCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCC GTCAAGGATCAGGACACTCTCCATAAGGTGGTGAGTGCCCC < 41bp 0.803873197185067 0.437474544907827 0.3159969 0.050548494 prediction 0.607746394370134 Functional Loss - ZNF197;ZNF660-ZNF197 ENSG00000186448 CDS Human protein_coding chr3:44672586 chr3:44672589 nonsynonymous SNV 0.028 2 24 hm5C_associated_SNPs_54024 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:44672568-44672590
64251 chrX 152034470 152034470 1 + G T UCEC 152034467 + 152034447 152034487 41 CAGTTGGTACCCATCCTCATCGAGGCAGCCAGGAACGGCAA CAGTTGGTACCCATCCTCATCGATGCAGCCAGGAACGGCAA < 41bp 0.887492255734414 0.583634248711831 0.9075552 0.22604352 prediction 0.607716014045167 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152034467 chrX:152034470 nonsynonymous SNV 0.290 1 24 hm5C_associated_SNPs_54027 0 0 2 GRWD1 POSTAR2 ENCODE chrX:152034430-152034486
64251 chr1 117605061 117605061 1 + G T LUAD 117605058 + 117605038 117605078 41 AGGACTTTGTGGTAGAGCTTCAGGGTTTGCTTCTGCCACAG AGGACTTTGTGGTAGAGCTTCAGTGTTTGCTTCTGCCACAG < 41bp 0.885310566560297 0.5814732804797 0.9190078 0.42612314 prediction 0.607674572161193 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117605058 chr1:117605061 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_54030 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:117605054-117605079
64251 chr13 34395333 34395333 1 + G T UCEC 34395330 + 34395310 34395350 41 ATCAGGTGCTGGAAAAAAGACAAGAATTATGTGTATTCTAC ATCAGGTGCTGGAAAAAAGACAATAATTATGTGTATTCTAC < 41bp 0.803804798414786 0.460972568062621 0.21500993 0.3232689 prediction 0.607609596829572 Functional Loss - RFC3 ENSG00000133119 CDS Human protein_coding chr13:34395330 chr13:34395333 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54032 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:34395274-34395387
64251 chr1 36755210 36755210 1 + G T COAD 36755208 + 36755188 36755228 41 TGACTGCTTATAAAGCAGTCCAGGAGAAAAGCTCATCACCT TGACTGCTTATAAAGCAGTCCATGAGAAAAGCTCATCACCT < 41bp 0.803757055825472 0.484475898074529 0.42403167 0.051683843 prediction 0.607514111650943 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36755208 chr1:36755210 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_54038 0 0 7 GRWD1 POSTAR2 ENCODE chr1:36755147-36755259
64251 chr19 14038829 14038829 1 + G T rs56359259 14038827 + 14038807 14038847 41 GCTGGTCATTGACCCTGTGCCGGCAGCTGTGCCCACAGTGA GCTGGTCATTGACCCTGTGCCGTCAGCTGTGCCCACAGTGA < 41bp 0.817916048573849 0.514160701232212 0.8132782 0.25692213 prediction 0.607510694683275 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14038827 chr19:14038829 nonsynonymous SNV 0.242 0 23 hm5C_associated_SNPs_54039 2 0 4 DDX24 POSTAR2 ENCODE chr19:14038819-14038840
64251 chr1 207872577 207872577 1 + G T ESCA 207872575 + 207872555 207872595 41 TGCTAGTTACTGTGTTTTGGCTGGAATGGAAAGCCTTTGGA TGCTAGTTACTGTGTTTTGGCTTGAATGGAAAGCCTTTGGA < 41bp 0.810035628701307 0.506331600140585 0.12032637 0.04050061 prediction 0.607408057121445 Functional Loss - CR1L ENSG00000197721 CDS Human protein_coding chr1:207872575 chr1:207872577 stopgain 0.011 0 23 hm5C_associated_SNPs_54044 0 0 1 SF3B1 POSTAR2 ENCODE chr1:207872563-207872578
64251 chr1 161179103 161179103 1 + G T UCEC 161179100 + 161179080 161179120 41 CTCCTCGGGCACAGTGGATCCGAGGTATGTCCCCCCAACTT CTCCTCGGGCACAGTGGATCCGATGTATGTCCCCCCAACTT < 41bp 0.887113019173692 0.583422371621872 0.91635 0.6517023 prediction 0.60738129510364 Functional Loss - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179100 chr1:161179103 nonsynonymous SNV 0.981 3 24 hm5C_associated_SNPs_54045 0 0 3 PRPF8 POSTAR2 ENCODE chr1:161179101-161179138
64251 chr19 38774304 38774304 1 + G T KIRP 38774302 + 38774282 38774322 41 CGAAGGTGGTGGGCAGATGCCGGGCCTCCATGCCTAGGTGG CGAAGGTGGTGGGCAGATGCCGTGCCTCCATGCCTAGGTGG < 41bp 0.803689499340165 0.464819952126569 0.91779274 0.61765826 prediction 0.60737899868033 Functional Loss - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38774302 chr19:38774304 synonymous SNV . 0 23 hm5C_associated_SNPs_54046 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:38774260-38774340
64251 chr15 45003799 45003799 1 + G T LUAD 45003796 + 45003776 45003816 41 CGCTACTCTCTCTTTCTGGCCTGGAGGCTATCCAGCGTGAG CGCTACTCTCTCTTTCTGGCCTGTAGGCTATCCAGCGTGAG < 41bp 0.866011533667756 0.562323197290699 0.3164469 0.11106193 prediction 0.607376672754113 Functional Loss - B2M ENSG00000166710 CDS Human protein_coding chr15:45003796 chr15:45003799 stopgain 0.056 0 24 hm5C_associated_SNPs_54047 0 0 34 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr3 101443534 101443534 1 + G T rs201771736 101443531 + 101443511 101443551 41 AGCAGCAAATATGGCGGTGGCGCGCGTGGACGCGGCTTTGC AGCAGCAAATATGGCGGTGGCGCTCGTGGACGCGGCTTTGC < 41bp 0.866257651944072 0.562605767509022 0.8316958 0.2638604 prediction 0.607303768870102 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101443531 chr3:101443534 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_54050 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:101443524-101443559
64251 chr20 2638632 2638632 1 + G T READ 2638629 + 2638609 2638649 41 AAAAGCCCCAGGAGGTTCCTCAGGAGAATGGAATGGAAGAC AAAAGCCCCAGGAGGTTCCTCAGTAGAATGGAATGGAAGAC < 41bp 0.87808144412184 0.574431281822241 0.90786564 0.47753972 prediction 0.607300324599197 Functional Loss - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2638629 chr20:2638632 stopgain 1.000 1 24 hm5C_associated_SNPs_54051 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:2638608-2638655
64251 chr20 17950613 17950613 1 + G T SARC 17950611 + 17950591 17950631 41 CTTCCTCTTACTCATGTGGCCGGAAGAAAAAAGTGAACCCA CTTCCTCTTACTCATGTGGCCGTAAGAAAAAAGTGAACCCA < 41bp 0.803637013793928 0.483954277701284 0.4875956 0.16933051 prediction 0.607274027587855 Functional Loss - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950611 chr20:17950613 synonymous SNV . 0 23 hm5C_associated_SNPs_54055 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:17950599-17950688
64251 chr2 10188500 10188500 1 + G T UCEC 10188497 + 10188477 10188517 41 CTGTGATGTTGGTCCTGCCCCAGGGAGCCCTCCCTCCGCCT CTGTGATGTTGGTCCTGCCCCAGTGAGCCCTCCCTCCGCCT < 41bp 0.895142746278029 0.591507008877605 0.95047164 0.8166895 prediction 0.607271474800848 Functional Loss - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188497 chr2:10188500 stopgain 0.063 0 24 hm5C_associated_SNPs_54056 0 0 3 FXR2 POSTAR2 ENCODE chr2:10188374-10188575
64251 chr19 35757839 35757839 1 + A C SKCM 35757835 + 35757815 35757855 41 GCTGGCCAACTTCGACCCTTCTCGACCTGGCCCCCCCAGTG GCTGGCCAACTTCGACCCTTCTCGCCCTGGCCCCCCCAGTG < 41bp 0.903624462243715 0.599993255089872 0.2747411 0.09562558 prediction 0.607262414307686 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35757835 chr19:35757839 synonymous SNV . 0 25 hm5C_associated_SNPs_54057 0 0 2 RPS3 POSTAR2 ENCODE chr19:35757836-35757859
64251 chr6 170201180 170201180 1 + A C UCEC 170201176 + 170201156 170201196 41 TGTGCTTGGTGGCCTGAGCACTGCAGTGAATCCATGTTTCC TGTGCTTGGTGGCCTGAGCACTGCCGTGAATCCATGTTTCC < 41bp 0.803630010749323 0.44499081615146 0.21140334 0.16329211 prediction 0.607260021498647 Functional Loss - LINC00574 ENSG00000231690 ncRNA_exonic Human lincRNA chr6:170201176 chr6:170201180 . . 0 25 hm5C_associated_SNPs_54058 0 0 1 AGGF1 POSTAR2 ENCODE chr6:170201131-170201203
64251 chr19 44585277 44585277 1 + G T LUSC 44585275 + 44585255 44585295 41 GATGTCATGCTGGAGAACTTCAGAAACCTGCTATCAGTGGG GATGTCATGCTGGAGAACTTCATAAACCTGCTATCAGTGGG < 41bp 0.803626959492895 0.479556685999693 0.36307433 0.16060647 prediction 0.607253918985791 Functional Loss - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44585275 chr19:44585277 nonsynonymous SNV 0.944 3 23 hm5C_associated_SNPs_54059 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44585237-44585278
64251 chr9 32423379 32423379 1 + G T UCEC 32423376 + 32423356 32423396 41 TTCAGGCTGTAGGAATGTTTCGAGATTTCAATGACCCTTCT TTCAGGCTGTAGGAATGTTTCGATATTTCAATGACCCTTCT < 41bp 0.860460074914371 0.556833363224182 0.9038601 0.10964009 prediction 0.607253423380379 Functional Loss - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32423376 chr9:32423379 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_54060 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:32423365-32423406
64251 chr13 88329492 88329492 1 + G T LUAD 88329490 + 88329470 88329510 41 GCTGCTGTGCCCTGACTATTCAGATGTAGTAGTTTCCACGC GCTGCTGTGCCCTGACTATTCATATGTAGTAGTTTCCACGC < 41bp 0.840645801353447 0.53704228902489 0.921264 0.153045 prediction 0.607207024657114 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329490 chr13:88329492 nonsynonymous SNV 0.886 2 23 hm5C_associated_SNPs_54061 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr13:88329480-88329500
64251 chr17 42430078 42430078 1 + G T HNSC 42430076 + 42430056 42430096 41 TGCTGTCCTGCTGGCTTCCGCTGCGCAGCCAGGGGTACCAA TGCTGTCCTGCTGGCTTCCGCTTCGCAGCCAGGGGTACCAA < 41bp 0.803565442205099 0.494404112265328 0.15144679 0.06679845 prediction 0.607130884410199 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42430076 chr17:42430078 nonsynonymous SNV 0.228 5 23 hm5C_associated_SNPs_54066 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr17:42430044-42430128
64251 chr19 49378957 49378957 1 + G T GBM 49378955 + 49378935 49378975 41 CCCGCCAGGGCCCCTGGGAGCAGCTTGCTCGGGATCGCAGC CCCGCCAGGGCCCCTGGGAGCATCTTGCTCGGGATCGCAGC < 41bp 0.826951014425352 0.523410497036059 0.13893184 0.16843069 prediction 0.607081034778586 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49378955 chr19:49378957 nonsynonymous SNV 0.617 3 23 hm5C_associated_SNPs_54070 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49378940-49378965
64251 chr6 148861604 148861604 1 + G T rs562076284 148861602 + 148861582 148861622 41 ACAGCGACCAGTCAGGATCCCAGGAGAAGCTGCTCGTTGAC ACAGCGACCAGTCAGGATCCCATGAGAAGCTGCTCGTTGAC < 41bp 0.842315635495715 0.538797106982762 0.915442 0.25167704 prediction 0.607037057025906 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148861602 chr6:148861604 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_54071 0 0 1 BUD13 POSTAR2 ENCODE chr6:148861567-148861682
64251 chr20 18534947 18534947 1 + G T rs7262532 18534945 + 18534925 18534965 41 ATGAAAACTTCAAGCACCTTCTGCAGGCACCACTGGATGAT ATGAAAACTTCAAGCACCTTCTTCAGGCACCACTGGATGAT < 41bp 0.803517196344785 0.497242302632467 0.07416916 0.038213223 prediction 0.607034392689571 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18534945 chr20:18534947 synonymous SNV . 0 23 hm5C_associated_SNPs_54072 2 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:18534918-18534954
64251 chr19 1207078 1207078 1 + G T LUAD 1207075 + 1207055 1207095 41 AGTACCTGATGGGGGACCTGCTGGGGGAAGGCTCTTACGGC AGTACCTGATGGGGGACCTGCTGTGGGAAGGCTCTTACGGC < 41bp 0.879459117825025 0.575950223599063 0.89227974 0.22641936 prediction 0.607017788451925 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207075 chr19:1207078 nonsynonymous SNV 0.899 4 24 hm5C_associated_SNPs_54074 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1207044-1207096
64251 chr3 12531365 12531365 1 + A C rs62637658 12531361 + 12531341 12531381 41 AGTGTATGAGACTTACGAGTCTCCATTGCCAATCCCTTTTG AGTGTATGAGACTTACGAGTCTCCCTTGCCAATCCCTTTTG < 41bp 0.803481221805814 0.385290504872887 0.9517019 0.07390985 prediction 0.606962443611628 Functional Loss - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12531361 chr3:12531365 synonymous SNV . 0 25 hm5C_associated_SNPs_54077 2 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr3:12531345-12531366
64251 chr20 43530271 43530271 1 + G T GBM 43530269 + 43530249 43530289 41 TGCAGCCATGAAGGCAGTCACAGAACAGGGGCATGAACTCT TGCAGCCATGAAGGCAGTCACATAACAGGGGCATGAACTCT < 41bp 0.816133274724189 0.512664826795841 0.27716315 0.10558811 prediction 0.606936895856696 Functional Loss - YWHAB ENSG00000166913 CDS Human protein_coding chr20:43530269 chr20:43530271 stopgain 0.963 1 23 hm5C_associated_SNPs_54079 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:43530237-43530289
64251 chr7 100867114 100867114 1 + A C UCEC 100867110 + 100867090 100867130 41 CTGTGCGCTGTCTGGGGACCCACCAGGAGACCAGGTGAGCA CTGTGCGCTGTCTGGGGACCCACCCGGAGACCAGGTGAGCA < 41bp 0.901479167386838 0.598036255323955 0.54370075 0.19765839 prediction 0.606885824125767 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867110 chr7:100867114 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_54083 0 0 4 LARP4 POSTAR2 ENCODE chr7:100867020-100867121
64251 chr19 42396810 42396810 1 + G T LUSC 42396807 + 42396787 42396827 41 CGGCTCATGGGCATGACGCCCTGGGAGCAGGAGCTGGCCCA CGGCTCATGGGCATGACGCCCTGTGAGCAGGAGCTGGCCCA < 41bp 0.873408319066203 0.56997158852267 0.28532505 0.07268754 prediction 0.606873461087064 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42396807 chr19:42396810 stopgain 1.000 3 24 hm5C_associated_SNPs_54084 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42396783-42396817
64251 chrX 100364503 100364503 1 + G T UCEC 100364501 + 100364481 100364521 41 GATATTGAAGTGCATGATCCCAGCAACAGTAATATCAGAAG GATATTGAAGTGCATGATCCCATCAACAGTAATATCAGAAG < 41bp 0.81597287937394 0.512542042727918 0.26643407 0.07515234 prediction 0.606861673292043 Functional Loss - CENPI ENSG00000102384 CDS Human protein_coding chrX:100364501 chrX:100364503 nonsynonymous SNV 0.941 0 23 hm5C_associated_SNPs_54085 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:100364468-100364520
64251 chr12 38710783 38710783 1 + G T KIRC 38710780 + 38710760 38710800 41 TCCTCTTCTCCGCCTTCAGCCGGGCGCTGCGAGAGCCCTAC TCCTCTTCTCCGCCTTCAGCCGGTCGCTGCGAGAGCCCTAC < 41bp 0.803428313983059 0.454277912573309 0.91228104 0.31697208 prediction 0.606856627966117 Functional Loss - ALG10B ENSG00000175548 CDS Human protein_coding chr12:38710780 chr12:38710783 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_54086 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr12:38710763-38710784
64251 chr4 83375922 83375922 1 + G T LUSC 83375919 + 83375899 83375939 41 AGTCAGGAAGTGGAGAGAGGCCGGAATGAAGGTGTACATCT AGTCAGGAAGTGGAGAGAGGCCGTAATGAAGGTGTACATCT < 41bp 0.875019463773908 0.571601608723068 0.32912982 0.118694216 prediction 0.606835710101681 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83375919 chr4:83375922 nonsynonymous SNV 0.796 4 24 hm5C_associated_SNPs_54088 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:83375882-83375922
64251 chr10 5966383 5966383 1 + G T UCEC 5966380 + 5966360 5966400 41 GAGGACAAGGAGCTTGAAGCCAAGATCGCAGTTGTTGAAAA GAGGACAAGGAGCTTGAAGCCAATATCGCAGTTGTTGAAAA < 41bp 0.803411647022732 0.436394057069931 0.10961375 0.040287137 prediction 0.606823294045464 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5966380 chr10:5966383 nonsynonymous SNV 0.856 3 24 hm5C_associated_SNPs_54089 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:5966363-5966393
64251 chr4 3419254 3419254 1 + G T LUAD 3419252 + 3419232 3419272 41 TCCCAGAAAAAGAGGGAGCACGGGGACCACGCAGACGGTTT TCCCAGAAAAAGAGGGAGCACGTGGACCACGCAGACGGTTT < 41bp 0.803395792227859 0.49619092739294 0.89284885 0.6524347 prediction 0.606791584455719 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3419252 chr4:3419254 nonsynonymous SNV 0.467 2 23 hm5C_associated_SNPs_54091 0 0 1 BUD13 POSTAR2 ENCODE chr4:3419192-3419263
64251 chr5 170736451 170736451 1 + G T LUAD 170736448 + 170736428 170736468 41 TCGACCAGATCCTTAACAGCCCGGACCAGGACAGCGCACCC TCGACCAGATCCTTAACAGCCCGTACCAGGACAGCGCACCC < 41bp 0.863775154914573 0.560416932503101 0.10934016 0.02175349 prediction 0.606716444822946 Functional Loss - TLX3 ENSG00000164438 CDS Human protein_coding chr5:170736448 chr5:170736451 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_54094 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:170736450-170736451
64251 chr19 58849788 58849788 1 + G T LUAD 58849785 + 58849765 58849805 41 CTCAGAGAGGTCTGGACTATCAGGGGAGATCTGGACAAAGT CTCAGAGAGGTCTGGACTATCAGTGGAGATCTGGACAAAGT < 41bp 0.877217262626169 0.573876340310263 0.9465539 0.82521904 prediction 0.606681844631812 Functional Loss - ZSCAN22 ENSG00000182318 CDS Human protein_coding chr19:58849785 chr19:58849788 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_54096 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:58849771-58849792
64251 chr17 41166192 41166192 1 + A C UCEC 41166188 + 41166168 41166208 41 TTCCTGATATCTTGGATGGCCCGGAGCTGCATGACGTCCTG TTCCTGATATCTTGGATGGCCCGGCGCTGCATGACGTCCTG < 41bp 0.875267861309567 0.571952801845802 0.35891348 0.23835519 prediction 0.606630118927531 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41166188 chr17:41166192 nonsynonymous SNV 0.268 1 25 hm5C_associated_SNPs_54102 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41166118-41166214
64251 chr15 67813876 67813876 1 + G T UCEC 67813874 + 67813854 67813894 41 TACCACTGCTCCAAGGCTCCCTGGCAGGACCTGGCCCGGCA TACCACTGCTCCAAGGCTCCCTTGCAGGACCTGGCCCGGCA < 41bp 0.803284282352635 0.47754131131336 0.055452317 0.015244395 prediction 0.606568564705271 Functional Loss - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67813874 chr15:67813876 nonsynonymous SNV 0.948 0 23 hm5C_associated_SNPs_54112 0 0 7 WDR33 POSTAR2 GSE61123,GSM1496985 chr15:67813844-67813877
64251 chr12 125509742 125509742 1 + G T LUSC 125509740 + 125509720 125509760 41 CCATGTCCTGCGTGTACATCCTGCACAAGTACGAGGGCGAG CCATGTCCTGCGTGTACATCCTTCACAAGTACGAGGGCGAG < 41bp 0.8066062120203 0.50336310059005 0.16395575 0.23744792 prediction 0.6064862228605 Functional Loss - BRI3BP ENSG00000184992 CDS Human protein_coding chr12:125509740 chr12:125509742 synonymous SNV . 0 23 hm5C_associated_SNPs_54117 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:125509715-125509775
64251 chr3 100455465 100455465 1 + G T UCEC 100455463 + 100455443 100455483 41 GATCGTTCAGGAACACCCGACAGCATTGCTTCCTCCTCCTC GATCGTTCAGGAACACCCGACATCATTGCTTCCTCCTCCTC < 41bp 0.82864994529783 0.5254149765522 0.2838214 0.22235325 prediction 0.60646993749126 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100455463 chr3:100455465 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_54119 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:100455427-100455466
64251 chr4 106640462 106640462 1 + G T PAAD 106640460 + 106640440 106640480 41 CAAAGAGCAAGGTCCACACACAGGAAACATCTGAAGGGTTG CAAAGAGCAAGGTCCACACACATGAAACATCTGAAGGGTTG < 41bp 0.825151498299404 0.52192402060291 0.8988223 0.8679304 prediction 0.606454955392989 Functional Loss - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106640460 chr4:106640462 nonsynonymous SNV 0.022 0 23 hm5C_associated_SNPs_54123 0 0 1 UCHL5 POSTAR2 ENCODE chr4:106640458-106640559
64251 chr3 25831594 25831594 1 + A C rs41285081 25831590 + 25831570 25831610 41 TGTGCGCGTGCGCTCGAGAGCGTCATCGCCCCCGACTGTGG TGTGCGCGTGCGCTCGAGAGCGTCCTCGCCCCCGACTGTGG < 41bp 0.846934460795828 0.543724739717846 0.027879685 0.020910025 prediction 0.606419442155965 Functional Loss - OXSM ENSG00000151093 UTR5 Human protein_coding chr3:25831590 chr3:25831594 . . 0 25 hm5C_associated_SNPs_54127 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:25831593-25831594
64251 chr6 27100998 27100998 1 + G T BLCA 27100995 + 27100975 27101015 41 AGCGGGTCGGGGCCGGCGCGCCGGTGTATCTGGCAGCGGTG AGCGGGTCGGGGCCGGCGCGCCGTTGTATCTGGCAGCGGTG < 41bp 0.803209385520607 0.429020797967537 0.7606342 0.19623724 prediction 0.606418771041214 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100995 chr6:27100998 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_54128 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr10 124352023 124352023 1 + A C rs544960589 124352019 + 124351999 124352039 41 TCTGGATGATGTGCGCTGCTCAGGACACGAGTCCTACCTGT TCTGGATGATGTGCGCTGCTCAGGCCACGAGTCCTACCTGT < 41bp 0.859010368970633 0.55580149981877 0.8391814 0.6837343 prediction 0.606417738303726 Functional Loss - DMBT1 ENSG00000187908 CDS Human protein_coding chr10:124352019 chr10:124352023 synonymous SNV . 0 25 hm5C_associated_SNPs_54129 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:124352020-124352040
64251 chr5 137681289 137681289 1 + G T LUAD 137681286 + 137681266 137681306 41 CGGCCTTCGTTGGACTTTGACAAGATGAATCAGGTGGGACC CGGCCTTCGTTGGACTTTGACAATATGAATCAGGTGGGACC < 41bp 0.803166503464974 0.433037056784715 0.86535025 0.39884245 prediction 0.606333006929948 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137681286 chr5:137681289 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54135 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221667 chr5:137681280-137681300
64251 chr16 2871417 2871417 1 + G T UCEC 2871415 + 2871395 2871435 41 ACAAGAATGGACTGTGGTATCAGATTGGAGTCGTGAGCTGG ACAAGAATGGACTGTGGTATCATATTGGAGTCGTGAGCTGG < 41bp 0.825287836976151 0.522154114243668 0.60150373 0.2253426 prediction 0.606267445464968 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2871415 chr16:2871417 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_54137 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:2871356-2871438
64251 chr16 28914697 28914697 1 + G T UCEC 28914694 + 28914674 28914714 41 ACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCAT ACCCAGTGGCTCATGGTCCTCAATATCTCACTGCCAGTCAT < 41bp 0.883905028269276 0.580774283469359 0.21388209 0.043346882 prediction 0.606261489599833 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28914694 chr16:28914697 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_54138 0 0 1 GRWD1 POSTAR2 ENCODE chr16:28914642-28914744
64251 chr3 10157412 10157412 1 + G T SARC 10157410 + 10157390 10157430 41 CGGGACAGGAGGATCCGGTGCAGCGGGAGATTCACCAGGAC CGGGACAGGAGGATCCGGTGCATCGGGAGATTCACCAGGAC < 41bp 0.827990774239662 0.52487163255027 0.8671822 0.83867407 prediction 0.606238283378784 Functional Loss - BRK1 ENSG00000254999 CDS Human protein_coding chr3:10157410 chr3:10157412 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_54141 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:10157376-10157442
64251 chr1 26878170 26878170 1 + G T LUSC 26878167 + 26878147 26878187 41 AGGGCAAGCTCTATCTCATTCTGGACTTCCTGCGTGGTGGG AGGGCAAGCTCTATCTCATTCTGTACTTCCTGCGTGGTGGG < 41bp 0.887863640706765 0.584767163499947 0.37541166 0.17922023 prediction 0.606192954413635 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26878167 chr1:26878170 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54142 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:26878154-26878178
64251 chr3 186501406 186501406 1 + G T LGG 186501404 + 186501384 186501424 41 AGTGGTTTTTCGGATCATGTCTGGTGGCTCCGCGGATTATA AGTGGTTTTTCGGATCATGTCTTGTGGCTCCGCGGATTATA < 41bp 0.815582718774525 0.512489606501422 0.8219842 0.41870388 prediction 0.606186224546207 Functional Loss - EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186501404 chr3:186501406 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_54143 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:186501402-186501428
64251 chr19 5077390 5077390 1 + G T LUSC 5077388 + 5077368 5077408 41 TCGGCCCTAGGCTTCTTCCCCGGGAGCTCGCAGGGCTGCGA TCGGCCCTAGGCTTCTTCCCCGTGAGCTCGCAGGGCTGCGA < 41bp 0.853542724247229 0.550466568970719 0.93570226 0.37934887 prediction 0.60615231055302 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5077388 chr19:5077390 nonsynonymous SNV 0.821 4 23 hm5C_associated_SNPs_54146 0 0 3 GRWD1 POSTAR2 ENCODE chr19:5077382-5077510
64251 chr1 32796465 32796465 1 + G T LUAD 32796463 + 32796443 32796483 41 ATTCGTAACGTTGCCCGGTGCTGGACATATGAGACAGCTGT ATTCGTAACGTTGCCCGGTGCTTGACATATGAGACAGCTGT < 41bp 0.826315454504951 0.523259803040607 0.21692598 0.1450364 prediction 0.606111302928687 Functional Loss - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32796463 chr1:32796465 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_54147 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:32796442-32796505
64251 chr7 150738265 150738265 1 + G T LUAD 150738263 + 150738243 150738283 41 TGATGCTGGATGGGCGGGACCTGCGCACCCTTGACCCCTCC TGATGCTGGATGGGCGGGACCTTCGCACCCTTGACCCCTCC < 41bp 0.803023782116343 0.4764887935478 0.07626465 0.067911 prediction 0.606047564232685 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150738263 chr7:150738265 synonymous SNV . 0 23 hm5C_associated_SNPs_54150 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:150738239-150738265
64251 chrX 48652627 48652627 1 + G T UCEC 48652624 + 48652604 48652644 41 GTGTCCTTCTCCTCTTGTAGCCAGAATTCTGGACAACCCAA GTGTCCTTCTCCTCTTGTAGCCATAATTCTGGACAACCCAA < 41bp 0.803018534227461 0.446670705179518 0.6436623 0.29312623 prediction 0.606037068454922 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652624 chrX:48652627 nonsynonymous SNV 0.023 1 24 hm5C_associated_SNPs_54152 0 0 2 PUM2 POSTAR2 ENCODE chrX:48652622-48652710
64251 chr17 41166275 41166275 1 + G T STAD 41166272 + 41166252 41166292 41 AGGCCCTGACAGTCGTACCCCAAGGACAGCAGGGCCTAGCA AGGCCCTGACAGTCGTACCCCAATGACAGCAGGGCCTAGCA < 41bp 0.88590706496602 0.582888802708687 0.40574273 0.29120165 prediction 0.606036524514666 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41166272 chr17:41166275 stopgain 0.543 1 24 hm5C_associated_SNPs_54153 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:41166260-41166280
64251 chr3 50091823 50091823 1 + G T UCEC 50091820 + 50091800 50091840 41 CTGTTCATTCTGCAAGAACCCAAGAGAAGGTGAGTGGCGAA CTGTTCATTCTGCAAGAACCCAATAGAAGGTGAGTGGCGAA < 41bp 0.803003106013471 0.447180861680207 0.8027283 0.11741826 prediction 0.606006212026942 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50091820 chr3:50091823 stopgain 0.950 1 24 hm5C_associated_SNPs_54155 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50091795-50091825
64251 chr8 48353079 48353079 1 + G T COAD 48353076 + 48353056 48353096 41 GCTACCTCAGGGGCCGTCCCCAGGACACTGTCCGGATCTTC GCTACCTCAGGGGCCGTCCCCAGTACACTGTCCGGATCTTC < 41bp 0.823985619501909 0.520983752916393 0.90158975 0.32928905 prediction 0.606003733171032 Functional Loss - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48353076 chr8:48353079 nonsynonymous SNV 0.033 4 24 hm5C_associated_SNPs_54156 0 0 2 NCBP2 POSTAR2 ENCODE chr8:48353066-48353106
64251 chr10 76980698 76980698 1 + G T LGG 76980696 + 76980676 76980716 41 AATAACTTTGCAGTGGGCTACAGGACTGGGGACTTCCAGCT AATAACTTTGCAGTGGGCTACATGACTGGGGACTTCCAGCT < 41bp 0.803000559238351 0.490888140575011 0.25493976 0.12665918 prediction 0.606001118476703 Functional Loss - VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76980696 chr10:76980698 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_54157 0 0 2 IGF2BP2 POSTAR2 ENCODE chr10:76980692-76980728
64251 chr1 42922986 42922986 1 + G T GBM 42922984 + 42922964 42923004 41 TGTTCCTGTCTCTGAAATGCCTGAACACAAGATCCAGTCAT TGTTCCTGTCTCTGAAATGCCTTAACACAAGATCCAGTCAT < 41bp 0.817147603888139 0.514155868025 0.28997785 0.2322191 prediction 0.605983471726278 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922984 chr1:42922986 stopgain 1.000 1 23 hm5C_associated_SNPs_54159 0 0 1 PPIG POSTAR2 ENCODE chr1:42922926-42923034
64251 chr3 127387303 127387303 1 + G T ACC 127387301 + 127387281 127387321 41 TAGGAGGTGTTCCGGCAGCACCGGGGGCCACAGCTCCTGGC TAGGAGGTGTTCCGGCAGCACCTGGGGCCACAGCTCCTGGC < 41bp 0.802980578878249 0.470182927464486 0.94960225 0.90047693 prediction 0.605961157756498 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127387301 chr3:127387303 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_54162 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:127387283-127387313
64251 chr20 18448072 18448072 1 + A C rs730203 18448068 + 18448048 18448088 41 GGCCTCAGCAGAGCGCTATCCTCCACTGGTTCCCCGGGTTC GGCCTCAGCAGAGCGCTATCCTCCCCTGGTTCCCCGGGTTC < 41bp 0.875735262537407 0.572783985911309 0.9599974 0.8287451 prediction 0.605902553252196 Functional Loss - POLR3F ENSG00000132664 UTR5 Human protein_coding chr20:18448068 chr20:18448072 . . 0 25 hm5C_associated_SNPs_54166 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:18448060-18448080
64251 chr4 79793867 79793867 1 + G T COAD 79793864 + 79793844 79793884 41 CTGAATATCTTACCTCCCCTCAAGAGTTCTCACCAGCCTTA CTGAATATCTTACCTCCCCTCAATAGTTCTCACCAGCCTTA < 41bp 0.802913838509058 0.428827108317744 0.8737062 0.23734841 prediction 0.605827677018116 Functional Loss - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79793864 chr4:79793867 stopgain 1.000 0 24 hm5C_associated_SNPs_54172 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr4:79793846-79793867
64251 chr20 49575390 49575390 1 + G T LUSC 49575388 + 49575368 49575408 41 GAAGAGGTCGCCATGGCTTCCCGGGAGGAGGTACTCGCCTT GAAGAGGTCGCCATGGCTTCCCTGGAGGAGGTACTCGCCTT < 41bp 0.821075142579346 0.518200901142026 0.82519925 0.13990593 prediction 0.605748482874639 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575388 chr20:49575390 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_54175 0 0 3 DDX3X POSTAR2 ENCODE chr20:49575374-49575454
64251 chr2 234102462 234102462 1 + G T COAD 234102459 + 234102439 234102479 41 TCTCCCACTTTCCCTGCAGGCGAGGGCTGCATTGCCCTTCG TCTCCCACTTTCCCTGCAGGCGATGGCTGCATTGCCCTTCG < 41bp 0.802861201176661 0.421141958663442 0.9325694 0.35752612 prediction 0.605722402353322 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234102459 chr2:234102462 nonsynonymous SNV 0.683 4 24 hm5C_associated_SNPs_54176 0 0 1 BUD13 POSTAR2 ENCODE chr2:234102416-234102476
64251 chr12 7047656 7047656 1 + G T BLCA 7047653 + 7047633 7047673 41 GTATCCCACAGAAGTTGGCTCAGGAGGGCCGTGCTCCGGTG GTATCCCACAGAAGTTGGCTCAGTAGGGCCGTGCTCCGGTG < 41bp 0.892129021680496 0.589275444127678 0.91245574 0.2801594 prediction 0.605707155105635 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7047653 chr12:7047656 stopgain 0.962 0 24 hm5C_associated_SNPs_54178 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:7047640-7047660
64251 chr17 38600328 38600328 1 + A C COAD 38600324 + 38600304 38600344 41 TCGAGGCCATCCAGGAAAGCCTGCAGCCCTCTGGTAAGGTA TCGAGGCCATCCAGGAAAGCCTGCCGCCCTCTGGTAAGGTA < 41bp 0.802851041624425 0.415536633698952 0.26414454 0.17497444 prediction 0.605702083248851 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38600324 chr17:38600328 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_54179 0 0 1 PRPF8 POSTAR2 ENCODE chr17:38600310-38600372
64251 chr5 176798907 176798907 1 + G T SARC 176798905 + 176798885 176798925 41 CTGCTGAACCGGGTGCAGAGCAGCGGGGCCCACGACCAGAG CTGCTGAACCGGGTGCAGAGCATCGGGGCCCACGACCAGAG < 41bp 0.802844878558083 0.482141615194997 0.8995432 0.72295576 prediction 0.605689757116166 Functional Loss - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176798905 chr5:176798907 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_54180 0 0 11 BUD13 POSTAR2 ENCODE chr5:176798837-176798917
64251 chr2 235961378 235961378 1 + G T THYM 235961376 + 235961356 235961396 41 TCTCCCCACCGGGACAGGAACGGGGTTGTGGACAGCGAGGT TCTCCCCACCGGGACAGGAACGTGGTTGTGGACAGCGAGGT < 41bp 0.846858490567428 0.544015521253852 0.9255338 0.4543972 prediction 0.605685938627152 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235961376 chr2:235961378 nonsynonymous SNV 0.963 4 23 hm5C_associated_SNPs_54181 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:235961374-235961392
64251 chr5 72251947 72251947 1 + G T COAD 72251944 + 72251924 72251964 41 ATGGTCATGGCGTATTTCGTCGAGAATTTTTGGGTAAGCTT ATGGTCATGGCGTATTTCGTCGATAATTTTTGGGTAAGCTT < 41bp 0.802842827280428 0.465976014628134 0.7251356 0.18304694 prediction 0.605685654560857 Functional Loss - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72251944 chr5:72251947 nonsynonymous SNV 0.861 0 24 hm5C_associated_SNPs_54182 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:72251944-72251970
64251 chr16 10841060 10841060 1 + G T LUAD 10841057 + 10841037 10841077 41 ACACAAAATCTTGGTATTGTCTGGGAAAGGCGGTGTTGGGA ACACAAAATCTTGGTATTGTCTGTGAAAGGCGGTGTTGGGA < 41bp 0.87716682297322 0.5743510851763 0.33884498 0.05151871 prediction 0.60563147559384 Functional Loss - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10841057 chr16:10841060 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54184 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:10841040-10841060
64251 chr2 71368480 71368480 1 + A C UCEC 71368476 + 71368456 71368496 41 GCCTTGCTGAAATTTATGAACAGGAGTACATCAAACTCAAC GCCTTGCTGAAATTTATGAACAGGCGTACATCAAACTCAAC < 41bp 0.884975866295793 0.582167811373376 0.8917302 0.88601375 prediction 0.605616109844835 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71368476 chr2:71368480 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_54185 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71368451-71368484
64251 chr20 45353979 45353979 1 + G T LUAD 45353976 + 45353956 45353996 41 TGGCTGGTTCCCTGGCCTGGCTGGTCCTGGGCCGCGCTGTG TGGCTGGTTCCCTGGCCTGGCTGTTCCTGGGCCGCGCTGTG < 41bp 0.802797645889065 0.412594391241414 0.34408534 0.2491659 prediction 0.605595291778131 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353976 chr20:45353979 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_54186 0 0 2 XPO5 POSTAR2 ENCODE chr20:45353931-45354016
64251 chr12 124220152 124220152 1 + G T LUSC 124220150 + 124220130 124220170 41 ATCCAGGAGGGGCTGAACACCCGCATCCAGGATCTCTACAC ATCCAGGAGGGGCTGAACACCCTCATCCAGGATCTCTACAC < 41bp 0.833182538029036 0.530389635098119 0.25508878 0.13309655 prediction 0.605585805861835 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124220150 chr12:124220152 nonsynonymous SNV 0.085 5 23 hm5C_associated_SNPs_54187 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:124220125-124220153
64251 chrX 38534989 38534989 1 + A T BLCA 38534985 + 38534965 38535005 41 TGCTGTGGTGTGCAGAACTACACCAACTGGAGCACCAGCCC TGCTGTGGTGTGCAGAACTACACCTACTGGAGCACCAGCCC < 41bp 0.802778633251309 0.472761184232911 0.14540869 0.104442924 prediction 0.605557266502619 Functional Loss - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38534985 chrX:38534989 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_54189 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chrX:38534980-38535000
64251 chr15 29385314 29385314 1 + G T LUSC 29385312 + 29385292 29385332 41 GAACCAGAAGACCTCATCGACGGGATCATCTTTGCTGCCAA GAACCAGAAGACCTCATCGACGTGATCATCTTTGCTGCCAA < 41bp 0.802771008877745 0.485825244034651 0.87967193 0.34330857 prediction 0.605542017755491 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29385312 chr15:29385314 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_54190 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29385290-29385328
64251 chr20 42087030 42087030 1 + G T HNSC 42087027 + 42087007 42087047 41 CTTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCG CTTCGTGGAGTTCGAGGACTCCCTCGACGCCGACGACGCCG < 41bp 0.802753569477038 0.45846695603503 0.17487067 0.10631275 prediction 0.605507138954077 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42087027 chr20:42087030 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_54192 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:42087014-42087091
64251 chr1 161681143 161681143 1 + G T LUSC 161681140 + 161681120 161681160 41 CTGGGTCCCCCCGGGCCTAACAGGGAATTCTCCATCACCGT CTGGGTCCCCCCGGGCCTAACAGTGAATTCTCCATCACCGT < 41bp 0.83730179327323 0.534553556845258 0.9420907 0.11973989 prediction 0.605496472855946 Functional Loss - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681140 chr1:161681143 nonsynonymous SNV 0.448 0 24 hm5C_associated_SNPs_54193 0 0 1 SND1 POSTAR2 ENCODE chr1:161681001-161681146
64251 chr17 3629698 3629698 1 + A C rs170208 3629694 + 3629674 3629714 41 GCCTCTGGTGCTGTTTCAACCTCCATCCCCACAGGAGGGTG GCCTCTGGTGCTGTTTCAACCTCCCTCCCCACAGGAGGGTG < 41bp 0.802712528409996 0.41976738413584 0.93224335 0.10470548 prediction 0.605425056819993 Functional Loss - HASPIN ENSG00000177602 UTR3 Human protein_coding chr17:3629694 chr17:3629698 . . 0 25 hm5C_associated_SNPs_54198 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:3629683-3629715
64251 chr3 66431139 66431139 1 - C A UCEC 66431142 - 66431122 66431162 41 CGGAGCCGGGTGGGAGTGACCAAGAGCATTCTCCACATCAC CGGAGCCGGGTGGGAGTGACCAATAGCATTCTCCACATCAC < 41bp 0.880363003472656 0.577653100742872 0.38248643 0.091169685 prediction 0.605419805459567 Functional Loss - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431142 chr3:66431139 stopgain 0.030 0 24 hm5C_associated_SNPs_54199 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:66431107-66431159
64251 chr10 44112250 44112250 1 + G T LGG 44112248 + 44112228 44112268 41 ACTGTGGGAAAGCCTTCGCTCAGAATGCAGCTCTTACTCGT ACTGTGGGAAAGCCTTCGCTCATAATGCAGCTCTTACTCGT < 41bp 0.825747570093209 0.523047502987092 0.6790208 0.051053345 prediction 0.605400134212234 Functional Loss - ZNF485 ENSG00000198298 CDS Human protein_coding chr10:44112248 chr10:44112250 nonsynonymous SNV 0.546 0 23 hm5C_associated_SNPs_54202 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:44112225-44112256
64251 chr15 65916465 65916465 1 + G T SARC 65916463 + 65916443 65916483 41 CCGCAAGAGAGGTGGTTACTCCGGACAAAGCGGCTTCATTG CCGCAAGAGAGGTGGTTACTCCTGACAAAGCGGCTTCATTG < 41bp 0.827240340618387 0.524597069938013 0.8733742 0.23722798 prediction 0.605286541360748 Functional Loss - SLC24A1 ENSG00000074621 CDS Human protein_coding chr15:65916463 chr15:65916465 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_54207 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:65916465-65916466
64251 chr19 17417119 17417119 1 + G T PAAD 17417117 + 17417097 17417137 41 AGCACGGCTGGGTCCGGCGCCTGAGCACGCCGGCCGGCGTG AGCACGGCTGGGTCCGGCGCCTTAGCACGCCGGCCGGCGTG < 41bp 0.839134763204175 0.536514838040818 0.39467877 0.39990532 prediction 0.605239850326713 Functional Loss - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417117 chr19:17417119 stoploss 0.970 0 23 hm5C_associated_SNPs_54210 0 0 1 RPS3 POSTAR2 ENCODE chr19:17417102-17417159
64251 chr6 37418091 37418091 1 + A C COAD 37418087 + 37418067 37418107 41 CCACTGAAATTCCTGACACTCAGGAAATGAGCGATTGGATG CCACTGAAATTCCTGACACTCAGGCAATGAGCGATTGGATG < 41bp 0.802605299040242 0.405644450336917 0.90629005 0.86934066 prediction 0.605210598080485 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37418087 chr6:37418091 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_54212 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:37418039-37418119
64251 chr17 40714478 40714478 1 + G T rs191068578 40714475 + 40714455 40714495 41 AGCCCCGAGGCGCCGTCTACCAGGCCCCGTCCCCTCCCCCG AGCCCCGAGGCGCCGTCTACCAGTCCCCGTCCCCTCCCCCG < 41bp 0.802603574027345 0.492927211346535 0.9124501 0.23578456 prediction 0.60520714805469 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40714475 chr17:40714478 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_54213 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:40714440-40714480
64251 chr19 39899218 39899218 1 + G T SARC 39899216 + 39899196 39899236 41 GACCCTGATGAATATGCCAGCAGCGGCAGCAGCCTGGGGGG GACCCTGATGAATATGCCAGCATCGGCAGCAGCCTGGGGGG < 41bp 0.844461214560566 0.54187691435474 0.86287224 0.2065295 prediction 0.605168600411652 Functional Loss - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899216 chr19:39899218 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_54217 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:39899205-39899241
64251 chr15 44671957 44671957 1 + G T LIHC 44671954 + 44671934 44671974 41 AGCAATCTCCCATCTTCCAACTGGACAACCTCTCTCCCCAA AGCAATCTCCCATCTTCCAACTGTACAACCTCTCTCCCCAA < 41bp 0.802574206335063 0.442899400114522 0.22581866 0.05934781 prediction 0.605148412670127 Functional Loss - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44671954 chr15:44671957 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_54220 0 0 6 NOP58 POSTAR2 GSE43666,GSM1067861 chr15:44671927-44671965
64251 chr17 41352530 41352530 1 + G T UCEC 41352528 + 41352508 41352548 41 CTGGAGGGGAGAACCAGCCACAGGAGCACAGCATAAGTGAC CTGGAGGGGAGAACCAGCCACATGAGCACAGCATAAGTGAC < 41bp 0.802527546103491 0.483750357912266 0.46403825 0.1881237 prediction 0.605055092206982 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41352528 chr17:41352530 nonsynonymous SNV 0.773 0 23 hm5C_associated_SNPs_54225 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:41352497-41352535
64251 chr22 39125575 39125575 1 + G T LUAD 39125573 + 39125553 39125593 41 ACGAGACGAGGGGGGCCCGTCTGGTGGGCCAGCAGTAGGAG ACGAGACGAGGGGGGCCCGTCTTGTGGGCCAGCAGTAGGAG < 41bp 0.802482596218238 0.465806215765356 0.50631815 0.1497258 prediction 0.604965192436476 Functional Loss - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39125573 chr22:39125575 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_54228 0 0 2 FXR2 POSTAR2 ENCODE chr22:39125551-39125604
64251 chr1 46033774 46033774 1 + G T LUAD 46033772 + 46033752 46033792 41 CTAAGGGGCTGGTGCAGGCGCTGGGCCTGTCCAACTTCAAC CTAAGGGGCTGGTGCAGGCGCTTGGCCTGTCCAACTTCAAC < 41bp 0.802473696032357 0.478983941061121 0.061232567 0.03923306 prediction 0.604947392064714 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033772 chr1:46033774 synonymous SNV . 0 23 hm5C_associated_SNPs_54230 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:46033771-46033794
64251 chr5 76342281 76342281 1 + A C UCEC 76342277 + 76342257 76342297 41 AGGCCAAAATAGGCATTCATCACAAAAATAGTCCCCCCAAA AGGCCAAAATAGGCATTCATCACACAAATAGTCCCCCCAAA < 41bp 0.802472232347304 0.410944289657401 0.048345417 0.05376342 prediction 0.604944464694607 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76342277 chr5:76342281 nonsynonymous SNV 0.240 0 25 hm5C_associated_SNPs_54232 0 0 2 FUS POSTAR2 SRX029328 chr5:76342269-76342297
64251 chr7 102113378 102113378 1 + G T CESC 102113376 + 102113356 102113396 41 ATCCTGAAGTGGCCCCAGCCCTGGGCCCTTGGCCAGGTGGT ATCCTGAAGTGGCCCCAGCCCTTGGCCCTTGGCCAGGTGGT < 41bp 0.832078659674882 0.529616305597343 0.7198863 0.19967741 prediction 0.604924708155079 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102113376 chr7:102113378 nonsynonymous SNV 0.155 0 23 hm5C_associated_SNPs_54234 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:102113359-102113411
64251 chr5 137684304 137684304 1 + G T rs534246277 137684301 + 137684281 137684321 41 TTTCTGGATCTCCTGCATGTCAGGAGCATCAGTGAGGCTTC TTTCTGGATCTCCTGCATGTCAGTAGCATCAGTGAGGCTTC < 41bp 0.8219835763217 0.519530914451174 0.898073 0.06526145 prediction 0.604905323741053 Functional Loss - FAM53C ENSG00000249971 ncRNA_intronic Human antisense chr5:137684301 chr5:137684304 . . 0 24 hm5C_associated_SNPs_54236 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:137684242-137684319
64251 chr19 37203754 37203754 1 + G T GBM 37203752 + 37203732 37203772 41 AGAGCCATGGACATCATTTGCAGGTCATACCTGCTTGGGTG AGAGCCATGGACATCATTTGCATGTCATACCTGCTTGGGTG < 41bp 0.841905648823404 0.539465751162598 0.8520075 0.35853267 prediction 0.604879795321614 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37203752 chr19:37203754 nonsynonymous SNV 0.974 1 23 hm5C_associated_SNPs_54240 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37203699-37203755
64251 chr2 208619396 208619396 1 + A C rs73060879 208619392 + 208619372 208619412 41 GTCTTACTGCGTTGTCCAGGCTGGAGTGCAGTGGCTTTTCA GTCTTACTGCGTTGTCCAGGCTGGCGTGCAGTGGCTTTTCA < 41bp 0.802418530278893 0.45385755279126 0.38995427 0.4046253 prediction 0.604837060557786 Functional Loss - CCNYL1 ENSG00000163249 UTR3 Human protein_coding chr2:208619392 chr2:208619396 . . 0 25 hm5C_associated_SNPs_54245 0 0 2 UPF1 POSTAR2 ENCODE chr2:208619356-208619411
64251 chr3 127325529 127325529 1 + A C rs558806976 127325525 + 127325505 127325545 41 ACTGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTG ACTGGCGTCCTGCCCCAGCTCAGCCTGGTCAAGTACAACTG < 41bp 0.912076688197331 0.609661288269439 0.23753595 0.14121482 prediction 0.604830799855786 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325525 chr3:127325529 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_54246 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:127325509-127325538
64251 chr12 13061863 13061863 1 + G T LUSC 13061861 + 13061841 13061881 41 TCCATTGCCATCTGGGTGGCCTGGATCACCCTGCTCATGCT TCCATTGCCATCTGGGTGGCCTTGATCACCCTGCTCATGCT < 41bp 0.83666254406496 0.534259192745456 0.4603336 0.10931614 prediction 0.604806702639008 Functional Loss - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061861 chr12:13061863 nonsynonymous SNV 0.738 5 23 hm5C_associated_SNPs_54250 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:13061863-13061864
64251 chr16 67229844 67229844 1 + G T PAAD 67229842 + 67229822 67229862 41 AGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACC AGCAGCAGCAGCAACAGTAACATCAGCAGTTCGTCCGGACC < 41bp 0.833485627018305 0.531108231304196 0.45598167 0.100388885 prediction 0.604754791428217 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67229842 chr16:67229844 nonsynonymous SNV 0.350 1 23 hm5C_associated_SNPs_54253 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:67229836-67229871
64251 chr11 5632149 5632149 1 + G T SARC 5632147 + 5632127 5632167 41 ACTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGGTAAG ACTGTAGTGTCCTGGGCTCCCATCACTTCTCCTCTGGTAAG < 41bp 0.802369475927708 0.494819026989744 0.25246248 0.1821604 prediction 0.604738951855417 Functional Loss - TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632147 chr11:5632149 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_54255 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:5632123-5632162
64251 chrX 154348405 154348405 1 + G T UCEC 154348402 + 154348382 154348422 41 AAGAAAAGGAAGAGCTTATGCAAGAACTTTCTTCTCTAGAA AAGAAAAGGAAGAGCTTATGCAATAACTTTCTTCTCTAGAA < 41bp 0.802362870100396 0.459455046524039 0.35361618 0.08400303 prediction 0.604725740200792 Functional Loss - BRCC3 ENSG00000185515 CDS Human protein_coding chrX:154348402 chrX:154348405 stopgain 1.000 1 24 hm5C_associated_SNPs_54256 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:154348398-154348428
64251 chr19 39114771 39114771 1 + G T CESC 39114769 + 39114749 39114789 41 CGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACTTG CGGTCACCGCCCAGATCCTGCTTAAGGCCCTCACCAACTTG < 41bp 0.802357152230774 0.477308671690379 0.12077883 0.12682801 prediction 0.604714304461548 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39114769 chr19:39114771 synonymous SNV . 0 23 hm5C_associated_SNPs_54257 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr19:39114718-39114771
64251 chr4 170634272 170634272 1 + G T SARC 170634269 + 170634249 170634289 41 AGAAGGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGC AGAAGGTATCGTTGGCAGTTCTCTGGTGTGTTTTGCACAGC < 41bp 0.802344184150058 0.443043137199563 0.19273698 0.23924237 prediction 0.604688368300116 Functional Loss - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170634269 chr4:170634272 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_54259 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr4:170634250-170634278
64251 chr11 209437 209437 1 + G T BRCA 209434 + 209414 209454 41 CGGAGCTGCTGGTCTCCGTCCTGGAACAGGGCTTGCCACCC CGGAGCTGCTGGTCTCCGTCCTGTAACAGGGCTTGCCACCC < 41bp 0.88472880832393 0.582394449201234 0.20377558 0.061531723 prediction 0.604668718245393 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209434 chr11:209437 stopgain 1.000 0 24 hm5C_associated_SNPs_54260 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:209437-209492
64251 chr5 433022 433022 1 + G T LUAD 433019 + 432999 433039 41 GGGCCCCATGCCTGTGCCTCCGGGGTGGCCCTGACCTTGTC GGGCCCCATGCCTGTGCCTCCGGTGTGGCCCTGACCTTGTC < 41bp 0.802332407579855 0.42389874662467 0.8678079 0.21890092 prediction 0.60466481515971 Functional Loss - AHRR ENSG00000063438 CDS Human protein_coding chr5:433019 chr5:433022 nonsynonymous SNV 0.021 3 24 hm5C_associated_SNPs_54261 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:433014-433030
64251 chr7 2473386 2473386 1 + G T UCEC 2473384 + 2473364 2473404 41 TTCCCCCCGAGCTACCGGAACAGGACCGCCAGCAGCTGGGA TTCCCCCCGAGCTACCGGAACATGACCGCCAGCAGCTGGGA < 41bp 0.828720824441131 0.526388999296611 0.27131832 0.06907314 prediction 0.604663650289042 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473384 chr7:2473386 nonsynonymous SNV 0.952 4 23 hm5C_associated_SNPs_54262 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473336-2473398
64251 chr7 128851580 128851580 1 + G T UCEC 128851578 + 128851558 128851598 41 GGAGAGGAGCCATACTGCCCCAGGATATTTCTGTCACCCCT GGAGAGGAGCCATACTGCCCCATGATATTTCTGTCACCCCT < 41bp 0.834970148959689 0.532662195644087 0.53657454 0.06568405 prediction 0.604615906631204 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128851578 chr7:128851580 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_54265 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:128851561-128851590
64251 chr10 99211645 99211645 1 + G T SKCM 99211643 + 99211623 99211663 41 CCTTTGAGCCTGTCTACTGGCTGGTAGACAACGTGATCCGC CCTTTGAGCCTGTCTACTGGCTTGTAGACAACGTGATCCGC < 41bp 0.838209293478831 0.535901517381421 0.2516976 0.08943537 prediction 0.60461555219482 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211643 chr10:99211645 synonymous SNV . 0 23 hm5C_associated_SNPs_54266 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:99211625-99211651
64251 chr22 41573107 41573107 1 + G T LUAD 41573104 + 41573084 41573124 41 GCTACCATGCCAAGCACTGCCAGGAGAACAAATGCCCGGTG GCTACCATGCCAAGCACTGCCAGTAGAACAAATGCCCGGTG < 41bp 0.870211128569291 0.56793385617092 0.93827486 0.27629322 prediction 0.604554544796741 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41573104 chr22:41573107 stopgain 1.000 1 24 hm5C_associated_SNPs_54269 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:41573100-41573120
64251 chrX 48116711 48116711 1 + G T LGG 48116709 + 48116689 48116729 41 GACACCTTTGCAAAGAGACCCAGGGATGATGCTAAAGCATC GACACCTTTGCAAAGAGACCCATGGATGATGCTAAAGCATC < 41bp 0.802275888471106 0.478092017568552 0.9253401 0.8831643 prediction 0.604551776942213 Functional Loss - SSX1 ENSG00000126752 CDS Human protein_coding chrX:48116709 chrX:48116711 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_54270 0 0 2 SF3B1 POSTAR2 ENCODE chrX:48116682-48116727
64251 chr6 33365888 33365888 1 + G T BRCA 33365885 + 33365865 33365905 41 CCCTTCCCAGCTGCCTCTCTCAGGAAGCAGACTCAAGAGGA CCCTTCCCAGCTGCCTCTCTCAGTAAGCAGACTCAAGAGGA < 41bp 0.887485595084573 0.585237745016291 0.9291903 0.672212 prediction 0.604495700136564 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33365885 chr6:33365888 nonsynonymous SNV 0.178 1 24 hm5C_associated_SNPs_54273 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:33365887-33365888
64251 chrX 153780352 153780352 1 + G T THYM 153780350 + 153780330 153780370 41 TGCTGCACCTGCCTTCAGAACAGGGCGCTCCTGAGACCCTC TGCTGCACCTGCCTTCAGAACATGGCGCTCCTGAGACCCTC < 41bp 0.852579264664096 0.550349059581802 0.83599997 0.22045812 prediction 0.604460410164587 Functional Loss - IKBKG ENSG00000073009 CDS Human other chrX:153780350 chrX:153780352 nonsynonymous SNV 0.095 1 23 hm5C_associated_SNPs_54276 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chrX:153780340-153780360
64251 chr19 32873819 32873819 1 + A T LUSC 32873815 + 32873795 32873835 41 TCATATAGTTTAGAAAAAATCTCCAGTCTGGCCCCTCCTAG TCATATAGTTTAGAAAAAATCTCCTGTCTGGCCCCTCCTAG < 41bp 0.803303937863879 0.501081832905705 0.92291844 0.03276491 prediction 0.60444420991635 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32873815 chr19:32873819 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_54277 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:32873778-32873835
64251 chr20 2637430 2637430 1 + G T SARC 2637427 + 2637407 2637447 41 CACACACATCCAGAGGTGCCCACGAGTGTATTCGGGGAGAA CACACACATCCAGAGGTGCCCACTAGTGTATTCGGGGAGAA < 41bp 0.877783525258509 0.575587793454474 0.26429912 0.08554271 prediction 0.604391463608069 Functional Loss - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637427 chr20:2637430 synonymous SNV . 0 24 hm5C_associated_SNPs_54279 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221665 chr20:2637420-2637440
64251 chr15 22969309 22969309 1 + G T STAD 22969306 + 22969286 22969326 41 AGGATCACCCTGCACGTCTTCTGGGAGCTCAACTATGACTT AGGATCACCCTGCACGTCTTCTGTGAGCTCAACTATGACTT < 41bp 0.802192094114069 0.431365105248502 0.37279335 0.050008535 prediction 0.604384188228138 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22969306 chr15:22969309 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_54280 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:22969289-22969312
64251 chr19 55855091 55855091 1 + G T UCEC 55855089 + 55855069 55855109 41 GCTGCTGGTGGGCTGCATTGCAGAGCTGCGGGAGGCAGATG GCTGCTGGTGGGCTGCATTGCATAGCTGCGGGAGGCAGATG < 41bp 0.802167024423551 0.463882307532559 0.89529777 0.39472198 prediction 0.604334048847102 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55855089 chr19:55855091 stopgain 0.733 0 23 hm5C_associated_SNPs_54282 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:55855091-55855092
64251 chr1 10477123 10477123 1 + G T STAD 10477121 + 10477101 10477141 41 GCAAAAAGCTGAAGGGTCCCCAGAAGTTCCAGTTTGATGGT GCAAAAAGCTGAAGGGTCCCCATAAGTTCCAGTTTGATGGT < 41bp 0.836127560713037 0.534007572072831 0.8417783 0.26314163 prediction 0.604239977280411 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10477121 chr1:10477123 nonsynonymous SNV 0.017 0 23 hm5C_associated_SNPs_54285 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:10477097-10477124
64251 chr1 181058850 181058850 1 + G T SARC 181058848 + 181058828 181058868 41 GGGAACGTGGCTAACCTCATCAGCATCTTCGGTTCCAGTTT GGGAACGTGGCTAACCTCATCATCATCTTCGGTTCCAGTTT < 41bp 0.802100641769419 0.494522527458463 0.76309776 0.2544508 prediction 0.604201283538837 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058848 chr1:181058850 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_54287 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:181058824-181058850
64251 chr3 37988590 37988590 1 + G T UCEC 37988588 + 37988568 37988608 41 TTAAAGAAGCAGAGGAGCCGCAGCATCCTTAGCTCCTTCTT TTAAAGAAGCAGAGGAGCCGCATCATCCTTAGCTCCTTCTT < 41bp 0.827663891598422 0.525592527579365 0.12455547 0.06685543 prediction 0.604142728038114 Functional Loss - CTDSPL ENSG00000144677 CDS Human protein_coding chr3:37988588 chr3:37988590 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_54289 0 0 1 DDX3X POSTAR2 ENCODE chr3:37988551-37988600
64251 chr21 34805074 34805074 1 - C A UCEC 34805076 - 34805056 34805096 41 CAGGCTCCTGCCAGCACCGACAGCAACGAAAATGTTCCCAC CAGGCTCCTGCCAGCACCGACATCAACGAAAATGTTCCCAC < 41bp 0.81457288293125 0.512523099034832 0.21047479 0.064404875 prediction 0.604099567792836 Functional Loss - IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34805076 chr21:34805074 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_54291 0 0 4 BUD13 POSTAR2 ENCODE chr21:34805045-34805116
64251 chr17 41165103 41165103 1 + G T COAD 41165100 + 41165080 41165120 41 CCAAGATCCCCCTGGTATTCCGAGGACACACCCAGCAGGAC CCAAGATCCCCCTGGTATTCCGATGACACACCCAGCAGGAC < 41bp 0.802048474853569 0.409381147877495 0.8114166 0.2137287 prediction 0.604096949707139 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41165100 chr17:41165103 stopgain 0.679 0 24 hm5C_associated_SNPs_54292 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:41165074-41165106
64251 chr4 3422412 3422412 1 + G T UCEC 3422410 + 3422390 3422430 41 GCCTGTGTCGCCGAGAGTCGCAGGGCTCTGTGTCCTCTGCG GCCTGTGTCGCCGAGAGTCGCATGGCTCTGTGTCCTCTGCG < 41bp 0.827407871280659 0.525380778282164 0.9388696 0.5223008 prediction 0.60405418599699 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3422410 chr4:3422412 nonsynonymous SNV 0.632 3 23 hm5C_associated_SNPs_54298 0 0 1 PPIG POSTAR2 ENCODE chr4:3422388-3422446
64251 chr12 100717379 100717379 1 + G T UCEC 100717376 + 100717356 100717396 41 CATGAAAAACGCTTTGATACCAAGAATTAAAAATGCTTGTC CATGAAAAACGCTTTGATACCAATAATTAAAAATGCTTGTC < 41bp 0.86020350162707 0.558197369505701 0.84425116 0.35183755 prediction 0.604012264242739 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100717376 chr12:100717379 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54301 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:100717365-100717386
64251 chr7 94294955 94294955 1 + A C rs559209797 94294951 + 94294931 94294971 41 GCCGCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGC GCCGCCACAGCCGCCGCCTCCACCCCCACCACCGCCGCCGC < 41bp 0.801986897926656 0.417911255185183 0.15881169 0.16684625 prediction 0.603973795853313 Functional Loss - PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294951 chr7:94294955 . . 0 25 hm5C_associated_SNPs_54305 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:94294940-94294960
64251 chr17 75196731 75196731 1 + G T STAD 75196729 + 75196709 75196749 41 GGTCCTTCAGGATTACTACGCGGGAGGCTGGCATCATCACG GGTCCTTCAGGATTACTACGCGTGAGGCTGGCATCATCACG < 41bp 0.835548692325013 0.533575432078732 0.9079273 0.3719321 prediction 0.603946520492563 Functional Loss - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75196729 chr17:75196731 stopgain 0.983 1 23 hm5C_associated_SNPs_54309 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:75196714-75196740
64251 chr17 78023892 78023892 1 + G T UCEC 78023890 + 78023870 78023910 41 CTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTG CTACCAAGCAGAGCCGAGCCCATCGGCAGGAGCTGGGGGTG < 41bp 0.801960992314067 0.451423220955701 0.9092442 0.52588415 prediction 0.603921984628133 Functional Loss - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78023890 chr17:78023892 nonsynonymous SNV 0.317 2 23 hm5C_associated_SNPs_54311 0 0 5 PPIG POSTAR2 ENCODE chr17:78023825-78023902
64251 chr1 221053271 221053271 1 + G T LUAD 221053268 + 221053248 221053288 41 TGGTCGGCCGCTTACTGCTCCTCGGCCGGCCCAGGCGGCTG TGGTCGGCCGCTTACTGCTCCTCTGCCGGCCCAGGCGGCTG < 41bp 0.801951453474599 0.428455452129126 0.20456636 0.1665675 prediction 0.603902906949198 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221053268 chr1:221053271 synonymous SNV . 0 24 hm5C_associated_SNPs_54315 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:221053243-221053271
64251 chr19 53994538 53994538 1 + G T LUSC 53994535 + 53994515 53994555 41 ATGCCATCGTAGACTTCATACTGGAGAGAAACCTTTCAAGT ATGCCATCGTAGACTTCATACTGTAGAGAAACCTTTCAAGT < 41bp 0.86069260600683 0.558759308053068 0.08528906 0.025784165 prediction 0.603866595907523 Functional Loss - ZNF813 ENSG00000198346 CDS Human protein_coding chr19:53994535 chr19:53994538 nonsynonymous SNV 0.048 3 24 hm5C_associated_SNPs_54317 0 0 1 UCHL5 POSTAR2 ENCODE chr19:53994523-53994588
64251 chr2 170592657 170592657 1 + G T UCEC 170592655 + 170592635 170592675 41 GTCTATGCTTTAGGTGGTTACAGAAAAGGGGCTCCAGCAGA GTCTATGCTTTAGGTGGTTACATAAAAGGGGCTCCAGCAGA < 41bp 0.801916482282768 0.495632180666051 0.37457064 0.23829085 prediction 0.603832964565536 Functional Loss - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170592655 chr2:170592657 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_54318 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:170592640-170592660
64251 chr2 239353036 239353036 1 + G T STAD 239353033 + 239353013 239353053 41 CCTGACTCCTGATGTCCAGCCTCGATTCTCCCGGCGGCTCA CCTGACTCCTGATGTCCAGCCTCTATTCTCCCGGCGGCTCA < 41bp 0.883660335014874 0.58174665781264 0.42060214 0.64097893 prediction 0.603827354404469 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239353033 chr2:239353036 nonsynonymous SNV 0.713 0 24 hm5C_associated_SNPs_54320 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr2:239353036-239353061
64251 chr8 17142026 17142026 1 + A T HNSC 17142022 + 17142002 17142042 41 TCAGGCAAGATTGAAAGTAGCTGCACATGAAGCTGAGGAAG TCAGGCAAGATTGAAAGTAGCTGCTCATGAAGCTGAGGAAG < 41bp 0.801903665464439 0.486766053600023 0.34107417 0.13980463 prediction 0.603807330928877 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17142022 chr8:17142026 synonymous SNV . 0 25 hm5C_associated_SNPs_54321 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr8:17142014-17142049
64251 chr19 17836875 17836875 1 + G T BLCA 17836872 + 17836852 17836892 41 CACCGTCCCCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGG CACCGTCCCCCTTCGAGCTGCTGTAGCCCCCGACCTCCGGG < 41bp 0.881368851311171 0.579465805628527 0.8205496 0.2980835 prediction 0.603806091365288 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836872 chr19:17836875 stopgain 0.107 1 24 hm5C_associated_SNPs_54322 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr14 50088860 50088860 1 + G T UCEC 50088857 + 50088837 50088877 41 CTGAATGTGATGTTCTCTCCCTGGGGACCTATAGTGCCAGT CTGAATGTGATGTTCTCTCCCTGTGGACCTATAGTGCCAGT < 41bp 0.868197902560843 0.566298767817034 0.4473777 0.028562874 prediction 0.603798269487618 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088857 chr14:50088860 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_54323 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr14:50088816-50088870
64251 chr19 37733559 37733559 1 + G T UCEC 37733556 + 37733536 37733576 41 ATCCAAATGGGCATTTTAGTCAAGAAATATTCACTCCTGAA ATCCAAATGGGCATTTTAGTCAATAAATATTCACTCCTGAA < 41bp 0.875579096631994 0.573700983491599 0.63854593 0.0927887 prediction 0.603756226280789 Functional Loss - ZNF383 ENSG00000188283 CDS Human protein_coding chr19:37733556 chr19:37733559 stopgain 0.918 0 24 hm5C_associated_SNPs_54325 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:37733559-37733600
64251 chr19 50155966 50155966 1 + G T OV 50155963 + 50155943 50155983 41 AGGGGTCTCGTCGGAAGGCGCTGGACGGGGGTGACCGGGAT AGGGGTCTCGTCGGAAGGCGCTGTACGGGGGTGACCGGGAT < 41bp 0.879415260869619 0.577539343307603 0.8762095 0.84860414 prediction 0.603751835124031 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155963 chr19:50155966 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_54326 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50155904-50156014
64251 chr6 147830338 147830338 1 + A C rs535026861 147830334 + 147830314 147830354 41 GGGCCGCCCGCCGACGCCGTCCCCACCGGCCGCCGGGGGGA GGGCCGCCCGCCGACGCCGTCCCCCCCGGCCGCCGGGGGGA < 41bp 0.801863611562136 0.443170004414659 0.1507777 0.18489686 prediction 0.603727223124271 Functional Loss - SAMD5 ENSG00000203727 CDS Human protein_coding chr6:147830334 chr6:147830338 nonsynonymous SNV 0.017 0 25 hm5C_associated_SNPs_54327 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr6:147830286-147830345
64251 chr19 44536837 44536837 1 + G T HNSC 44536834 + 44536814 44536854 41 GGTCCATCAACGAGTCCACACTGGAGAAAAGCCATACAAAT GGTCCATCAACGAGTCCACACTGTAGAAAAGCCATACAAAT < 41bp 0.80184437062803 0.437268254099818 0.056473047 0.009078562 prediction 0.603688741256061 Functional Loss - ZNF222 ENSG00000159885 CDS Human protein_coding chr19:44536834 chr19:44536837 nonsynonymous SNV 0.075 3 24 hm5C_associated_SNPs_54329 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:44536809-44536841
64251 chr8 106810992 106810992 1 + G T LUSC 106810990 + 106810970 106811010 41 AGTCCTGTGGCATCTGGTATCGGAGTGAGCGGAATCTGCAG AGTCCTGTGGCATCTGGTATCGTAGTGAGCGGAATCTGCAG < 41bp 0.801827073571008 0.483113613895228 0.92021966 0.8681898 prediction 0.603654147142016 Functional Loss - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106810990 chr8:106810992 synonymous SNV . 0 23 hm5C_associated_SNPs_54330 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:106810980-106811000
64251 chr1 156347929 156347929 1 + G T COAD 156347926 + 156347906 156347946 41 AGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGGA AGTTTGTGCTCCTTCATCTCCTGTGGGTGAGAGTCTGGGGA < 41bp 0.890466793036914 0.588652844829827 0.8197526 0.06263459 prediction 0.603627896414173 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156347926 chr1:156347929 nonsynonymous SNV 0.297 3 24 hm5C_associated_SNPs_54332 0 0 1 RBFOX2 POSTAR2 ENCODE chr1:156347923-156347985
64251 chr11 65688402 65688402 1 + A T STAD 65688398 + 65688378 65688418 41 TGATGGGGAAGAGGAGACATCACAACCCCCACCCCAGGCCA TGATGGGGAAGAGGAGACATCACATCCCCCACCCCAGGCCA < 41bp 0.816021036228444 0.514220384929249 0.09173074 0.047778994 prediction 0.60360130259839 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65688398 chr11:65688402 nonsynonymous SNV 0.077 1 25 hm5C_associated_SNPs_54335 0 0 3 YBX3 POSTAR2 ENCODE chr11:65688371-65688433
64251 chr6 170179373 170179373 1 + A C COAD 170179369 + 170179349 170179389 41 CTGTTTGTGGGAAGAATGCGCATGAGTATCAGCAGTACCTA CTGTTTGTGGGAAGAATGCGCATGCGTATCAGCAGTACCTA < 41bp 0.801781909693303 0.431895810588399 0.13934109 0.24166599 prediction 0.603563819386606 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170179369 chr6:170179373 nonsynonymous SNV 0.084 3 25 hm5C_associated_SNPs_54336 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:170179345-170179376
64251 chr1 118477298 118477298 1 + G T LUAD 118477295 + 118477275 118477315 41 GCTAGGAGGCAGACTGGCATCTGGGTCCAAGGTGAGCCTTT GCTAGGAGGCAGACTGGCATCTGTGTCCAAGGTGAGCCTTT < 41bp 0.869709767196743 0.567948586505338 0.38431942 0.09115031 prediction 0.603522361382809 Functional Loss - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118477295 chr1:118477298 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54344 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:118477277-118477302
64251 chr10 3158984 3158984 1 + G T LUAD 3158982 + 3158962 3159002 41 CATTAGATCAAAGAAATCGGCTGGACAGATGTCGGGGGCTG CATTAGATCAAAGAAATCGGCTTGACAGATGTCGGGGGCTG < 41bp 0.801736572816585 0.485013509002175 0.22977251 0.15411618 prediction 0.603473145633169 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3158982 chr10:3158984 nonsynonymous SNV 0.971 4 23 hm5C_associated_SNPs_54346 0 0 2 SRSF1 POSTAR2 ENCODE chr10:3158984-3159043
64251 chr1 57378115 57378115 1 + G T UCEC 57378112 + 57378092 57378132 41 AGGTGCTGCGGCACACAAGCCTGGGGCCTCTGGAGGCCAAG AGGTGCTGCGGCACACAAGCCTGTGGCCTCTGGAGGCCAAG < 41bp 0.889401968426067 0.587695356665882 0.74506253 0.2525079 prediction 0.60341322352037 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57378112 chr1:57378115 nonsynonymous SNV 0.248 4 24 hm5C_associated_SNPs_54349 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr1 212274119 212274119 1 + A C COAD 212274115 + 212274095 212274135 41 TGTGCTGCCTTGCTGGTAACCAGGAAGACCTTAGTAAGGAC TGTGCTGCCTTGCTGGTAACCAGGCAGACCTTAGTAAGGAC < 41bp 0.801686394249575 0.413434730790281 0.8093327 0.86352813 prediction 0.603372788499149 Functional Loss - DTL ENSG00000143476 CDS Human protein_coding chr1:212274115 chr1:212274119 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_54350 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212273915-212274121
64251 chr8 27311760 27311760 1 + G T UCEC 27311757 + 27311737 27311777 41 GTGCGGGCCGTGCTGGAGCTCAAGAATGAGCTCTGTCAGCT GTGCGGGCCGTGCTGGAGCTCAATAATGAGCTCTGTCAGCT < 41bp 0.801678233457437 0.435979531108525 0.7825671 0.15094095 prediction 0.603356466914875 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27311757 chr8:27311760 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_54351 0 0 2 FMR1 POSTAR2 ENCODE chr8:27311725-27311773
64251 chr11 65770766 65770766 1 + G T LUAD 65770763 + 65770743 65770783 41 CGAGACTTCGTGGCAGAGCCCATGGGGGAGAAGCCAGTGGG CGAGACTTCGTGGCAGAGCCCATTGGGGAGAAGCCAGTGGG < 41bp 0.801657289581165 0.417261728918502 0.8210434 0.31370914 prediction 0.60331457916233 Functional Loss - BANF1 ENSG00000175334 CDS Human protein_coding chr11:65770763 chr11:65770766 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_54356 0 0 5 DDX55 POSTAR2 ENCODE chr11:65770705-65770789
64251 chr3 44828003 44828003 1 + G T UCEC 44828000 + 44827980 44828020 41 CTGTACTTAAGGGAGCATATCAAGAAGGGAGTCTTTGTTGT CTGTACTTAAGGGAGCATATCAATAAGGGAGTCTTTGTTGT < 41bp 0.874369290152864 0.572717973619702 0.79079473 0.23674434 prediction 0.603302633066323 Functional Loss - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44828000 chr3:44828003 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_54358 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:44827950-44828008
64251 chr12 105558084 105558084 1 + A T LUSC 105558080 + 105558060 105558100 41 AGAAGCGACTGGATGTCTATCTACAGGTAGAGAGGAGCCTA AGAAGCGACTGGATGTCTATCTACTGGTAGAGAGGAGCCTA < 41bp 0.801628885041888 0.490061593007895 0.26529053 0.14331272 prediction 0.603257770083776 Functional Loss - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105558080 chr12:105558084 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_54364 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:105558059-105558098
64251 chr19 30936318 30936318 1 + G T OV 30936315 + 30936295 30936335 41 CACACGGGCTGAACCAGACTCTCGAGTATAACCTGCAGGGT CACACGGGCTGAACCAGACTCTCTAGTATAACCTGCAGGGT < 41bp 0.801605866423097 0.43590009319033 0.3553089 0.8592285 prediction 0.603211732846194 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936315 chr19:30936318 stopgain 0.530 0 24 hm5C_associated_SNPs_54367 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30936293-30936318
64251 chr16 1825398 1825398 1 + G T KIRC 1825395 + 1825375 1825415 41 CCGAGGTGGCCGTCAGCTGGCCGGAGGTGGAAGAGGTGAGG CCGAGGTGGCCGTCAGCTGGCCGTAGGTGGAAGAGGTGAGG < 41bp 0.801598972461928 0.437123953292242 0.8250717 0.5064626 prediction 0.603197944923856 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825395 chr16:1825398 stopgain 0.122 0 24 hm5C_associated_SNPs_54368 0 0 4 BUD13 POSTAR2 ENCODE chr16:1825385-1825413
64251 chr12 124093304 124093304 1 + G T SARC 124093302 + 124093282 124093322 41 GCCGAAGGCTTGGATCTGGCCAGCTGTGTGCGATCCCTGGA GCCGAAGGCTTGGATCTGGCCATCTGTGTGCGATCCCTGGA < 41bp 0.801596808504903 0.489479221051171 0.8235739 0.42996728 prediction 0.603193617009806 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124093302 chr12:124093304 nonsynonymous SNV 0.881 1 23 hm5C_associated_SNPs_54369 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:124093261-124093313
64251 chr11 7441832 7441832 1 + G T LUAD 7441829 + 7441809 7441849 41 GAGTGAAATGTTGTCATATCCTCGGAAGCCCATTGCACACT GAGTGAAATGTTGTCATATCCTCTGAAGCCCATTGCACACT < 41bp 0.801578519333635 0.444273180136481 0.2628311 0.18348786 prediction 0.603157038667271 Functional Loss - SYT9 ENSG00000170743 CDS Human protein_coding chr11:7441829 chr11:7441832 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54375 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr11:7441824-7441843
64251 chr9 140137568 140137568 1 + A T UCEC 140137564 + 140137544 140137584 41 CAGATGTTTGATGCCAAGAACATGATGGCTGCCTGCGACCC CAGATGTTTGATGCCAAGAACATGTTGGCTGCCTGCGACCC < 41bp 0.8015676870859 0.495127517421531 0.28198075 0.31448025 prediction 0.6031353741718 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137564 chr9:140137568 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_54376 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:140137520-140137580
64251 chr16 71885621 71885621 1 + G T UCEC 71885618 + 71885598 71885638 41 GCTTCCAAAGATACAGCATGCAAGGGGAGGAGGCACGGGCT GCTTCCAAAGATACAGCATGCAATGGGAGGAGGCACGGGCT < 41bp 0.801540088809169 0.439375897300175 0.41523936 0.13718334 prediction 0.603080177618337 Functional Loss - ATXN1L ENSG00000224470 CDS Human protein_coding chr16:71885618 chr16:71885621 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_54381 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:71885619-71885639
64251 chr1 29638208 29638208 1 + G T COAD 29638205 + 29638185 29638225 41 TCAGACACCTACGGGGACATCAAGATTATGCTGGTGAAGAC TCAGACACCTACGGGGACATCAATATTATGCTGGTGAAGAC < 41bp 0.877108296133196 0.575587807418744 0.31394145 0.29882404 prediction 0.603040977428904 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29638205 chr1:29638208 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_54384 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29638188-29638220
64251 chr19 16319905 16319905 1 + A T COAD 16319901 + 16319881 16319921 41 CCGCGGCCACCAGCCACCGTCACCAACGCGGTGTCCTGGCG CCGCGGCCACCAGCCACCGTCACCTACGCGGTGTCCTGGCG < 41bp 0.801511036294822 0.469506904027661 0.7755934 0.85736954 prediction 0.603022072589643 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16319901 chr19:16319905 nonsynonymous SNV 0.259 4 25 hm5C_associated_SNPs_54386 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:16319904-16319905
64251 chr10 121432086 121432086 1 + G T LUAD 121432084 + 121432064 121432104 41 TCTGTCCAGGGTGCATCGAGCCGGGAGGGCTCACCAGCCAG TCTGTCCAGGGTGCATCGAGCCTGGAGGGCTCACCAGCCAG < 41bp 0.848354419328508 0.546850244468526 0.9276326 0.50919545 prediction 0.603008349719964 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121432084 chr10:121432086 nonsynonymous SNV 0.838 2 23 hm5C_associated_SNPs_54387 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:121432060-121432088
64251 chr17 19559769 19559769 1 + G T SARC 19559767 + 19559747 19559787 41 CATTTTCTATACGGGAAACACTGCGGTTGGCAAAATTGTCA CATTTTCTATACGGGAAACACTTCGGTTGGCAAAATTGTCA < 41bp 0.801490537146726 0.497352781381867 0.099799454 0.017747343 prediction 0.602981074293453 Functional Loss - ALDH3A2 ENSG00000072210 CDS Human protein_coding chr17:19559767 chr17:19559769 nonsynonymous SNV 0.294 1 23 hm5C_associated_SNPs_54389 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:19559757-19559785
64251 chr12 56515471 56515471 1 + G T UCEC 56515469 + 56515449 56515489 41 CCCTGGCTCAAACAATTGCCCAGGGAATGGCACCTCCACCT CCCTGGCTCAAACAATTGCCCATGGAATGGCACCTCCACCT < 41bp 0.838096413578921 0.536632640464553 0.9367209 0.5240353 prediction 0.602927546228737 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515469 chr12:56515471 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_54395 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:56515461-56515493
64251 chr17 26370193 26370193 1 + A C rs188572032 26370189 + 26370169 26370209 41 ACAGCCATATTTCCCATCACCGGCACCGGGGCAGGCTCCTG ACAGCCATATTTCCCATCACCGGCCCCGGGGCAGGCTCCTG < 41bp 0.893545103920972 0.592087712910649 0.33753383 0.22829321 prediction 0.602914782020646 Functional Loss - NLK ENSG00000087095 CDS Human protein_coding chr17:26370189 chr17:26370193 synonymous SNV . 0 25 hm5C_associated_SNPs_54396 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:26370160-26370200
64251 chr4 108873183 108873183 1 + G T rs554243520 108873180 + 108873160 108873200 41 GGCTACCCCTTGGCCTCATGCTGGAGTTGTGTGTGTCTGTC GGCTACCCCTTGGCCTCATGCTGTAGTTGTGTGTGTCTGTC < 41bp 0.801444465438769 0.473840131756759 0.19396195 0.04020062 prediction 0.602888930877539 Functional Loss - CYP2U1 ENSG00000245293 ncRNA_intronic Human antisense chr4:108873180 chr4:108873183 . . 0 24 hm5C_associated_SNPs_54398 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:108873179-108873208
64251 chr1 210411457 210411457 1 + G T LUAD 210411455 + 210411435 210411475 41 CAAGCTCCTTTGCAGGGAGACCGGGGAGCTGGTCCCCCACT CAAGCTCCTTTGCAGGGAGACCTGGGAGCTGGTCCCCCACT < 41bp 0.801444038969229 0.458160850513065 0.79846454 0.6261488 prediction 0.602888077938458 Functional Loss - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210411455 chr1:210411457 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_54399 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210411446-210411476
64251 chr4 184210713 184210713 1 + G T LUSC 184210711 + 184210691 184210731 41 AGCTGGAGGAACTGAAAGCTCAGGGAGAGACTGACCTTCCA AGCTGGAGGAACTGAAAGCTCATGGAGAGACTGACCTTCCA < 41bp 0.814426490056697 0.5129966072846 0.92141616 0.8951574 prediction 0.602859765544195 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184210711 chr4:184210713 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_54404 0 0 1 UCHL5 POSTAR2 ENCODE chr4:184210670-184210738
64251 chr7 6620309 6620309 1 + G T UCEC 6620307 + 6620287 6620327 41 GCCTGGCCAGGGGAGGAGCACAGGTAAGGATGATCCTTGGA GCCTGGCCAGGGGAGGAGCACATGTAAGGATGATCCTTGGA < 41bp 0.801413879834813 0.477718469196471 0.8967023 0.4055156 prediction 0.602827759669625 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6620307 chr7:6620309 nonsynonymous SNV 0.546 2 23 hm5C_associated_SNPs_54409 0 0 1 EFTUD2 POSTAR2 ENCODE chr7:6620178-6620330
64251 chr4 1746346 1746346 1 + G T SARC 1746344 + 1746324 1746364 41 AGGCCCACGCGGAGGAGAAGCTGCAGCTGTGAGTGCTGGGC AGGCCCACGCGGAGGAGAAGCTTCAGCTGTGAGTGCTGGGC < 41bp 0.830034005613156 0.528645415097772 0.42121154 0.24541697 prediction 0.602777181030768 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1746344 chr4:1746346 synonymous SNV . 0 23 hm5C_associated_SNPs_54410 0 0 7 DDX24 POSTAR2 ENCODE chr4:1746338-1746352
64251 chr12 71833921 71833921 1 + G T HNSC 71833919 + 71833899 71833939 41 TGTGCTGCTGCAGCTGGCGACCGGGGGCAGCTCTCCCAGGT TGTGCTGCTGCAGCTGGCGACCTGGGGCAGCTCTCCCAGGT < 41bp 0.849679522392962 0.548333425172111 0.9347054 0.8112297 prediction 0.602692194441701 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71833919 chr12:71833921 nonsynonymous SNV 0.731 2 23 hm5C_associated_SNPs_54416 0 0 4 DDX3X POSTAR2 ENCODE chr12:71833883-71833948
64251 chr8 106573666 106573666 1 + G T LUAD 106573664 + 106573644 106573684 41 CAACTTCCAGTGGGAACAACCTGGGGGCCGTTTCCTGGGAA CAACTTCCAGTGGGAACAACCTTGGGGCCGTTTCCTGGGAA < 41bp 0.801345526900617 0.498425970589879 0.9191716 0.37498856 prediction 0.602691053801235 Functional Loss - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106573664 chr8:106573666 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54417 0 0 4 UCHL5 POSTAR2 ENCODE chr8:106573587-106573703
64251 chr16 1817858 1817858 1 + G T CESC 1817855 + 1817835 1817875 41 CGCATCACGGCCCTGCTTGTCGCGGGCAGCCGGCTCTGGGT CGCATCACGGCCCTGCTTGTCGCTGGCAGCCGGCTCTGGGT < 41bp 0.801307728219144 0.423045284267544 0.9052994 0.24260223 prediction 0.602615456438287 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1817855 chr16:1817858 synonymous SNV . 0 24 hm5C_associated_SNPs_54421 0 0 1 ZNF622 POSTAR2 ENCODE chr16:1817841-1817904
64251 chr3 9719032 9719032 1 + G T LGG 9719030 + 9719010 9719050 41 TTTTCAAGGAATATAAAGATCGGGATTACATGGCAGAAGGG TTTTCAAGGAATATAAAGATCGTGATTACATGGCAGAAGGG < 41bp 0.801294046828069 0.489508442956224 0.898018 0.0870066 prediction 0.602588093656139 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9719030 chr3:9719032 synonymous SNV . 0 23 hm5C_associated_SNPs_54422 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9719015-9719045
64251 chr16 3072172 3072172 1 + G T rs190588947 3072169 + 3072149 3072189 41 CTTGGGGGGCAGACTTGACACTAGGCCCCACTCACTCAGAT CTTGGGGGGCAGACTTGACACTATGCCCCACTCACTCAGAT < 41bp 0.841366958159589 0.540113790792335 0.65401417 0.1746361 prediction 0.602506334734507 Functional Loss - TNFRSF12A ENSG00000006327 UTR3 Human protein_coding chr16:3072169 chr16:3072172 . . 0 24 hm5C_associated_SNPs_54425 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:3072172-3072195
64251 chr12 121125332 121125332 1 + G T LUAD 121125330 + 121125310 121125350 41 CCTTTGGAAGGCCGGGTGGGCCGAGGTGAGAGTCCCCCTGC CCTTTGGAAGGCCGGGTGGGCCTAGGTGAGAGTCCCCCTGC < 41bp 0.839417187445365 0.538202510554116 0.9283649 0.8356807 prediction 0.602429353782498 Functional Loss - MLEC ENSG00000110917 CDS Human protein_coding chr12:121125330 chr12:121125332 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_54428 0 0 8 BUD13 POSTAR2 ENCODE chr12:121125298-121125342
64251 chr11 9522759 9522759 1 + A C STAD 9522755 + 9522735 9522775 41 ACCTTATTACTGCACAGAGCCAGGATGTGGGAGGGCATTTG ACCTTATTACTGCACAGAGCCAGGCTGTGGGAGGGCATTTG < 41bp 0.899140443283203 0.597945592942112 0.89437073 0.8406736 prediction 0.602389700682182 Functional Loss - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9522755 chr11:9522759 synonymous SNV . 0 25 hm5C_associated_SNPs_54429 0 0 1 UCHL5 POSTAR2 ENCODE chr11:9522722-9522797
64251 chr8 33346310 33346310 1 + G T LUAD 33346307 + 33346287 33346327 41 GCGGCTTTTCCTCGGCGTCTCTGGGAACGGGTAAGCCTTAC GCGGCTTTTCCTCGGCGTCTCTGTGAACGGGTAAGCCTTAC < 41bp 0.874648082986916 0.573473175515045 0.20560661 0.052428365 prediction 0.602349814943743 Functional Loss - MAK16 ENSG00000198042 CDS Human protein_coding chr8:33346307 chr8:33346310 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54430 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:33346281-33346317
64251 chr7 155530331 155530331 1 + G T UCEC 155530329 + 155530309 155530349 41 GGAGAGCCCCACCCCCGCCTCAGGATCGAGACCCTTTCTTC GGAGAGCCCCACCCCCGCCTCATGATCGAGACCCTTTCTTC < 41bp 0.801136498904978 0.469076178129608 0.90799373 0.15707499 prediction 0.602272997809955 Functional Loss - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155530329 chr7:155530331 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_54432 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:155530305-155530343
64251 chr16 722181 722181 1 + G T UCEC 722179 + 722159 722199 41 GGACCAGGCCCATGCCATCACAGGTAGGCACCCACCCTCCC GGACCAGGCCCATGCCATCACATGTAGGCACCCACCCTCCC < 41bp 0.801068215288494 0.470875345501686 0.8901727 0.7122817 prediction 0.602136430576988 Functional Loss - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722179 chr16:722181 nonsynonymous SNV 0.829 4 23 hm5C_associated_SNPs_54440 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:722154-722267
64251 chr12 56547784 56547784 1 + G T GBM 56547782 + 56547762 56547802 41 TGCTGCTAAGCCAGCAGCAGCAGGGGCTCCTCCAGCCAAGA TGCTGCTAAGCCAGCAGCAGCATGGGCTCCTCCAGCCAAGA < 41bp 0.853888664657471 0.552823883992171 0.94447976 0.14941248 prediction 0.602129561330601 Functional Loss - MYL6B ENSG00000196465 CDS Human protein_coding chr12:56547782 chr12:56547784 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_54441 0 0 5 DDX55 POSTAR2 ENCODE chr12:56547714-56547798
64251 chr4 110415841 110415841 1 + A T rs61745402 110415837 + 110415817 110415857 41 TGAACCTGATCCTGCTTCTGCTCCAGCTCCAGCTTCAGCTC TGAACCTGATCCTGCTTCTGCTCCTGCTCCAGCTTCAGCTC < 41bp 0.845586310411256 0.544694347870148 0.41465738 0.14649186 prediction 0.601783925082217 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415837 chr4:110415841 synonymous SNV . 0 25 hm5C_associated_SNPs_54468 0 0 5 IGF2BP1 POSTAR2 ENCODE chr4:110415823-110415933
64251 chr12 6500019 6500019 1 + G T COAD 6500016 + 6499996 6500036 41 ACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGA ACACCCCACCAGGAAGATGGCAATGCTTGGCACCTAGCGGA < 41bp 0.800879664631119 0.433569369749853 0.60341567 0.20591223 prediction 0.601759329262239 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6500016 chr12:6500019 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_54469 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:6500011-6500032
64251 chr6 13592107 13592107 1 + G T UCEC 13592104 + 13592084 13592124 41 CTGCACCGCAAGGCTGGCACCAAGAACCTTCTGGAGATCCA CTGCACCGCAAGGCTGGCACCAATAACCTTCTGGAGATCCA < 41bp 0.800866887283478 0.429852844078965 0.33529449 0.12570566 prediction 0.601733774566955 Functional Loss - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13592104 chr6:13592107 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_54470 0 0 1 PRPF8 POSTAR2 ENCODE chr6:13592083-13592166
64251 chr2 98264477 98264477 1 + G T SARC 98264475 + 98264455 98264495 41 TTAGGTGAAGAGGACAATACCAGCGTCGTCTGGTTTTGGCT TTAGGTGAAGAGGACAATACCATCGTCGTCTGGTTTTGGCT < 41bp 0.820462917391739 0.519635039118821 0.60819024 0.17551154 prediction 0.601655756545836 Functional Loss - COX5B ENSG00000135940 CDS Human protein_coding chr2:98264475 chr2:98264477 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_54475 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:98264460-98264480
64251 chr19 36120133 36120133 1 + G T LIHC 36120131 + 36120111 36120151 41 CGGGTCCTGGCGCTGGCATCCCGGGCAAAAGCGGCGAGGAA CGGGTCCTGGCGCTGGCATCCCTGGCAAAAGCGGCGAGGAA < 41bp 0.800819482490164 0.476482249427213 0.8856803 0.12789008 prediction 0.601638964980328 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120131 chr19:36120133 synonymous SNV . 0 23 hm5C_associated_SNPs_54477 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36120099-36120133
64251 chr16 30972772 30972772 1 + G T SARC 30972770 + 30972750 30972790 41 CTGGCCCGTGTGCTCTTCACCAGCACTCGGGGCGCCAAGGA CTGGCCCGTGTGCTCTTCACCATCACTCGGGGCGCCAAGGA < 41bp 0.800779297300653 0.473621759067989 0.26526427 0.068265766 prediction 0.601558594601306 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30972770 chr16:30972772 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54482 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:30972752-30972789
64251 chr12 53453529 53453529 1 + G T UCEC 53453527 + 53453507 53453547 41 GGAGAAGCTGGCGCTGCCTACAGCAGCCTTGTATGGACTGC GGAGAAGCTGGCGCTGCCTACATCAGCCTTGTATGGACTGC < 41bp 0.800774559237975 0.475367691064323 0.4947395 0.12700304 prediction 0.60154911847595 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453527 chr12:53453529 nonsynonymous SNV 0.689 2 23 hm5C_associated_SNPs_54484 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:53453520-53453540
64251 chr11 63960577 63960577 1 + A T LUSC 63960573 + 63960553 63960593 41 AATGAGCTGAAGGAGAAAGGCAACAAGGCCCTGAGCGTGGG AATGAGCTGAAGGAGAAAGGCAACTAGGCCCTGAGCGTGGG < 41bp 0.814242730780968 0.513477458303024 0.04466626 0.03647566 prediction 0.601530544955888 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63960573 chr11:63960577 stopgain 1.000 0 25 hm5C_associated_SNPs_54486 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:63960540-63960580
64251 chr11 60610100 60610100 1 + A C rs114409171 60610096 + 60610076 60610116 41 CACCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAG CACCAGAGCCTTACCCCGGTCAGCCAGCTCCCGGTCCGGAG < 41bp 0.800750300791728 0.417739761553833 0.2875854 0.13451293 prediction 0.601500601583455 Functional Loss - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60610096 chr11:60610100 nonsynonymous SNV 0.205 0 25 hm5C_associated_SNPs_54488 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:60610080-60610100
64251 chr11 60610098 60610098 1 + G T LUAD 60610096 + 60610076 60610116 41 CACCAGAGCCTTACCCCGGTCAGCAAGCTCCCGGTCCGGAG CACCAGAGCCTTACCCCGGTCATCAAGCTCCCGGTCCGGAG < 41bp 0.800750300791728 0.476219214867369 0.2875854 0.21068504 prediction 0.601500601583455 Functional Loss - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60610096 chr11:60610098 nonsynonymous SNV 0.173 1 23 hm5C_associated_SNPs_54489 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:60610080-60610100
64251 chr3 16343274 16343274 1 + G T UCEC 16343272 + 16343252 16343292 41 GCTTTCCATCCTGCGGCACGCAGCAGATCTCCTCAGAGAGC GCTTTCCATCCTGCGGCACGCATCAGATCTCCTCAGAGAGC < 41bp 0.817226950117627 0.516518797048962 0.82622284 0.059611678 prediction 0.601416306137329 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343272 chr3:16343274 nonsynonymous SNV 0.049 3 23 hm5C_associated_SNPs_54496 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:16343249-16343287
64251 chr15 41763442 41763442 1 + G T CESC 41763440 + 41763420 41763460 41 TGAATCGGGTTCGATTATCACGGCATAAGCTAGAACGCTGG TGAATCGGGTTCGATTATCACGTCATAAGCTAGAACGCTGG < 41bp 0.800705191305834 0.484432639917021 0.88183236 0.44524357 prediction 0.601410382611668 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41763440 chr15:41763442 synonymous SNV . 0 23 hm5C_associated_SNPs_54498 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:41763422-41763453
64251 chr12 53453566 53453566 1 + G T LUSC 53453563 + 53453543 53453583 41 ACTGCGGCTGGAGAGGGAGGCTGGAGAAGGGTGGGCAAGTG ACTGCGGCTGGAGAGGGAGGCTGTAGAAGGGTGGGCAAGTG < 41bp 0.876734557900231 0.576037889331121 0.89882666 0.66249585 prediction 0.601393337138221 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453563 chr12:53453566 nonsynonymous SNV 0.085 2 24 hm5C_associated_SNPs_54501 0 0 4 DDX55 POSTAR2 ENCODE chr12:53453531-53453570
64251 chr2 113940668 113940668 1 + G T STAD 113940665 + 113940645 113940685 41 CCCACCTGAGAATGAAGACTCAGGGGAAGACAGCAGTGAGC CCCACCTGAGAATGAAGACTCAGTGGAAGACAGCAGTGAGC < 41bp 0.800656996957363 0.454155852471084 0.91598606 0.5408411 prediction 0.601313993914726 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940665 chr2:113940668 nonsynonymous SNV 0.036 1 24 hm5C_associated_SNPs_54508 0 0 1 UCHL5 POSTAR2 ENCODE chr2:113940613-113940696
64251 chr1 156339067 156339067 1 + G T LUAD 156339064 + 156339044 156339084 41 GCCGGGTCTCCTAGCCGCGCCGCGGGCCGGCGACTGCAGCT GCCGGGTCTCCTAGCCGCGCCGCTGGCCGGCGACTGCAGCT < 41bp 0.800640258212125 0.441931306784025 0.5401193 0.24113122 prediction 0.601280516424251 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156339064 chr1:156339067 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_54509 0 0 2 NCBP2 POSTAR2 ENCODE chr1:156339002-156339087
64251 chr2 48701891 48701891 1 + G T UCEC 48701889 + 48701869 48701909 41 CCAGGAATCTAGAGCTGTCCCAGGACATGAAAAAAATGACA CCAGGAATCTAGAGCTGTCCCATGACATGAAAAAAATGACA < 41bp 0.820741622828595 0.520176752802959 0.4539345 0.15295663 prediction 0.601129740051272 Functional Loss - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48701889 chr2:48701891 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_54516 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:48701873-48701898
64251 chr5 6746493 6746493 1 + G T SARC 6746491 + 6746471 6746511 41 GAGATCATGAAAGCCATGACCAGCGGGTACAGACCGTCGAT GAGATCATGAAAGCCATGACCATCGGGTACAGACCGTCGAT < 41bp 0.838936233071612 0.538389630963977 0.8512019 0.25440386 prediction 0.60109320421527 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6746491 chr5:6746493 nonsynonymous SNV 0.976 2 23 hm5C_associated_SNPs_54517 0 0 15 FMR1 POSTAR2 GSE39682,GSM977616 chr5:6746483-6746533
64251 chrX 102840581 102840581 1 + G T SARC 102840579 + 102840559 102840599 41 GTGCGGGCCTTCCACGCTGCCAGCGGAACACTGGAATGGCG GTGCGGGCCTTCCACGCTGCCATCGGAACACTGGAATGGCG < 41bp 0.803586511501304 0.503070220544105 0.85198 0.43327382 prediction 0.601032581914397 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102840579 chrX:102840581 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_54520 0 0 1 PRPF8 POSTAR2 ENCODE chrX:102840531-102840590
64251 chr19 36603843 36603843 1 + A T rs149534478 36603839 + 36603819 36603859 41 GCTTTCATGACGCCTTCGATCTCAAGCGCCACATGAGGACT GCTTTCATGACGCCTTCGATCTCATGCGCCACATGAGGACT < 41bp 0.831830584432154 0.53137524698089 0.05094701 0.064620525 prediction 0.600910674902527 Functional Loss - OVOL3 ENSG00000105261 CDS Human protein_coding chr19:36603839 chr19:36603843 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_54525 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36603820-36603850
64251 chr2 181927579 181927579 1 + G T LUAD 181927576 + 181927556 181927596 41 ACCAACAGAGCAGAACACGACAGGATAGCCAGACAGTGGAC ACCAACAGAGCAGAACACGACAGTATAGCCAGACAGTGGAC < 41bp 0.871082975282909 0.570723236161976 0.7871294 0.2371887 prediction 0.600719478241866 Functional Loss - UBE2E3 ENSG00000170035 CDS Human protein_coding chr2:181927576 chr2:181927579 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_54536 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704215 chr2:181927560-181927580
64251 chr11 116701533 116701533 1 + G T LUAD 116701530 + 116701510 116701550 41 CCTCCCTTCTCAGCTTCATGCAGGGTTACATGAAGCACGCC CCTCCCTTCTCAGCTTCATGCAGTGTTACATGAAGCACGCC < 41bp 0.892962401298158 0.592623939720311 0.8693702 0.15133402 prediction 0.600676923155693 Functional Loss - APOC3 ENSG00000110245 CDS Human protein_coding chr11:116701530 chr11:116701533 nonsynonymous SNV 0.168 3 24 hm5C_associated_SNPs_54537 0 0 4 DDX3X POSTAR2 ENCODE chr11:116701488-116701538
64251 chr7 156752834 156752834 1 + G T SARC 156752832 + 156752812 156752852 41 ACTGAAGCCCAGACCAAAGCCAGCGGGGCAGGCAGCGAGTT ACTGAAGCCCAGACCAAAGCCATCGGGGCAGGCAGCGAGTT < 41bp 0.800323784536237 0.478986943022796 0.6011096 0.1540086 prediction 0.600647569072473 Functional Loss - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156752832 chr7:156752834 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_54538 0 0 3 UCHL5 POSTAR2 ENCODE chr7:156752786-156752866
64251 chr11 47587496 47587496 1 + G T UCEC 47587493 + 47587473 47587513 41 AACGTGCGCGGGGTGATCACCATGAACGAGGAGTACGAGAC AACGTGCGCGGGGTGATCACCATTAACGAGGAGTACGAGAC < 41bp 0.800301810825519 0.464119724542886 0.315131 0.045040876 prediction 0.600603621651039 Functional Loss - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47587493 chr11:47587496 stopgain 1.000 1 24 hm5C_associated_SNPs_54540 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr11:47587472-47587496
64251 chr14 60756587 60756587 1 + G T UCEC 60756584 + 60756564 60756604 41 CCATGTGATGCGCACATTAGCGAGTGAGAACATCCCCAGCC CCATGTGATGCGCACATTAGCGATTGAGAACATCCCCAGCC < 41bp 0.872295804158454 0.572025259477651 0.89711726 0.10648051 prediction 0.600541089361607 Functional Loss - PPM1A ENSG00000100614 CDS Human protein_coding chr14:60756584 chr14:60756587 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_54545 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr14:60756548-60756591
64251 chr16 81944184 81944184 1 + A C STAD 81944180 + 81944160 81944200 41 CCACCATGGAGGGCGGGACCCTGAAATACTACTTGACTGAC CCACCATGGAGGGCGGGACCCTGACATACTACTTGACTGAC < 41bp 0.800227063768823 0.386268907712437 0.73374903 0.3683918 prediction 0.600454127537647 Functional Loss - PLCG2 ENSG00000197943 CDS Human protein_coding chr16:81944180 chr16:81944184 nonsynonymous SNV 0.956 5 25 hm5C_associated_SNPs_54550 0 0 1 FXR2 POSTAR2 ENCODE chr16:81944123-81944257
64251 chr1 168282103 168282103 1 + G T LUAD 168282101 + 168282081 168282121 41 CACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGG CACCCAAGCACCCACTTCGGCTTGTGTGGAGGTTCTGGGGG < 41bp 0.800216799739335 0.469335132171622 0.49925807 0.18239892 prediction 0.60043359947867 Functional Loss - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168282101 chr1:168282103 nonsynonymous SNV 0.539 2 23 hm5C_associated_SNPs_54551 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:168282100-168282123
64251 chr1 168282104 168282104 1 + G T LUAD 168282101 + 168282081 168282121 41 CACCCAAGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGG CACCCAAGCACCCACTTCGGCTGTTGTGGAGGTTCTGGGGG < 41bp 0.800216799739335 0.414230977759666 0.49925807 0.1817888 prediction 0.60043359947867 Functional Loss - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168282101 chr1:168282104 nonsynonymous SNV 0.540 2 24 hm5C_associated_SNPs_54552 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:168282100-168282123
64251 chr10 12150011 12150011 1 + G T GBM 12150009 + 12149989 12150029 41 CCTGTCGAATAGAGCGTTTCCTGCAGGTAAGGGTAACGTCT CCTGTCGAATAGAGCGTTTCCTTCAGGTAAGGGTAACGTCT < 41bp 0.800214562907064 0.487444776076683 0.073798716 0.080058604 prediction 0.600429125814128 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12150009 chr10:12150011 synonymous SNV . 0 23 hm5C_associated_SNPs_54554 0 0 1 PRPF8 POSTAR2 ENCODE chr10:12149989-12150045
64251 chr3 25833414 25833414 1 + A C STAD 25833410 + 25833390 25833430 41 AAGAAGAGCCCGGATCTATGCAGAAGTTTTGGGCTATGGAC AAGAAGAGCCCGGATCTATGCAGACGTTTTGGGCTATGGAC < 41bp 0.890715461410564 0.590521289608703 0.8543024 0.72015625 prediction 0.600388343603723 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833410 chr3:25833414 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_54557 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:25833410-25833431
64251 chr7 99048353 99048353 1 + G T LGG 99048351 + 99048331 99048371 41 TCTGCAGGCACCGGCACACACGGAGAGTCATCTGTGTGAAT TCTGCAGGCACCGGCACACACGTAGAGTCATCTGTGTGAAT < 41bp 0.800189347336829 0.464204115685348 0.89701086 0.20185784 prediction 0.600378694673658 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99048351 chr7:99048353 synonymous SNV . 0 23 hm5C_associated_SNPs_54559 0 0 1 SF3B4 POSTAR2 ENCODE chr7:99048301-99048354
64251 chr12 4657926 4657926 1 + A C rs116552921 4657922 + 4657902 4657942 41 AAGAAAAGCAGCATCTAAAGCTGCAGCACAGCAGAGGAAGA AAGAAAAGCAGCATCTAAAGCTGCCGCACAGCAGAGGAAGA < 41bp 0.800130761902288 0.393619810757928 0.21374974 0.20211908 prediction 0.600261523804576 Functional Loss - RAD51AP1 ENSG00000111247 CDS Human protein_coding chr12:4657922 chr12:4657926 synonymous SNV . 0 25 hm5C_associated_SNPs_54564 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:4657894-4657928
64251 chr10 75551702 75551702 1 + G T COAD 75551699 + 75551679 75551719 41 GGGGCCAACACAAGAAGACGCTGGAGCGGCTCTTCCCCGGC GGGGCCAACACAAGAAGACGCTGTAGCGGCTCTTCCCCGGC < 41bp 0.882300613278929 0.582177923985155 0.27714717 0.06871849 prediction 0.600245378587548 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551699 chr10:75551702 stopgain 0.993 0 24 hm5C_associated_SNPs_54566 0 0 6 GRWD1 POSTAR2 ENCODE chr10:75551658-75551711
64251 chr4 83369174 83369174 1 + G T LUSC 83369172 + 83369152 83369192 41 ATGTCAGTCTTTTGAGGAAACAGGTTGGGACATTTCTGTCT ATGTCAGTCTTTTGAGGAAACATGTTGGGACATTTCTGTCT < 41bp 0.800019688502954 0.481338445844648 0.23083496 0.16562763 prediction 0.600039377005908 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83369172 chr4:83369174 nonsynonymous SNV 0.951 4 23 hm5C_associated_SNPs_54576 0 0 2 BUD13 POSTAR2 ENCODE chr4:83369136-83369198
64251 chr17 80012512 80012512 1 + G T BLCA 80012510 + 80012490 80012530 41 TGGAGAAGCTGGACACAGACCTGAAGAACTACAAGGGCAAC TGGAGAAGCTGGACACAGACCTTAAGAACTACAAGGGCAAC < 41bp 0.799995065460154 0.485905341760153 0.0834147 0.007866293 prediction 0.599990130920309 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012510 chr17:80012512 synonymous SNV . 0 23 hm5C_associated_SNPs_54581 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:80012460-80012520
64251 chr17 80544048 80544048 1 + G T STAD 80544046 + 80544026 80544066 41 CCCCTCCTAAGGCAGAGGCCCAGGAGAATGGAGACCACAGG CCCCTCCTAAGGCAGAGGCCCATGAGAATGGAGACCACAGG < 41bp 0.799962061892649 0.471701673543955 0.886383 0.45189235 prediction 0.599924123785298 Functional Loss - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544046 chr17:80544048 nonsynonymous SNV 0.633 2 23 hm5C_associated_SNPs_54584 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:80544040-80544060
64251 chr5 70751764 70751764 1 + G T LUAD 70751761 + 70751741 70751781 41 GTCAGGCCTGGTGTAGGCGCCAGGGGCTCCACAGCTTCCAA GTCAGGCCTGGTGTAGGCGCCAGTGGCTCCACAGCTTCCAA < 41bp 0.799928031170157 0.453901326171779 0.83893347 0.32838848 prediction 0.599856062340314 Functional Loss - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70751761 chr5:70751764 nonsynonymous SNV 0.475 2 24 hm5C_associated_SNPs_54587 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:70751735-70751773
64251 chr5 70751763 70751763 1 + G T LUAD 70751761 + 70751741 70751781 41 GTCAGGCCTGGTGTAGGCGCCAGGGGCTCCACAGCTTCCAA GTCAGGCCTGGTGTAGGCGCCATGGGCTCCACAGCTTCCAA < 41bp 0.799928031170157 0.474690977021503 0.83893347 0.18597293 prediction 0.599856062340314 Functional Loss - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70751761 chr5:70751763 nonsynonymous SNV 0.474 3 23 hm5C_associated_SNPs_54588 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:70751735-70751773
64251 chr19 12902676 12902676 1 + G T SARC 12902673 + 12902653 12902693 41 CCCCTGGTGGCCTCTCTCTACACGACTACAAACTCCTGAAA CCCCTGGTGGCCTCTCTCTACACTACTACAAACTCCTGAAA < 41bp 0.870171266547629 0.570245774192869 0.021481246 0.012785494 prediction 0.59985098470952 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12902673 chr19:12902676 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_54589 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:12902641-12902744
64251 chr5 167933794 167933794 1 + G T LUSC 167933791 + 167933771 167933811 41 TTGGTATGACCCTAAAGTAACTCGAGTCTTCCATGCTGGAT TTGGTATGACCCTAAAGTAACTCTAGTCTTCCATGCTGGAT < 41bp 0.863680389046321 0.563783465434258 0.15933496 0.34397733 prediction 0.599793847224126 Functional Loss - RARS ENSG00000113643 CDS Human protein_coding chr5:167933791 chr5:167933794 nonsynonymous SNV 0.691 0 24 hm5C_associated_SNPs_54591 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167933787-167933807
64251 chr12 58140501 58140501 1 + G T HNSC 58140499 + 58140479 58140519 41 ACAAGATTATGATTTCTGCACTGCAGTGAGTGTGTTGGGGG ACAAGATTATGATTTCTGCACTTCAGTGAGTGTGTTGGGGG < 41bp 0.802882088651871 0.502988615011909 0.07206589 0.054975748 prediction 0.599786947279924 Functional Loss - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140499 chr12:58140501 nonsynonymous SNV 0.979 2 23 hm5C_associated_SNPs_54593 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:58140473-58140501
64251 chr19 44605025 44605025 1 + G T SARC 44605023 + 44605003 44605043 41 TGGGGCTGCTGGACCTTGCTCAGAGGAAGCTGTATCGAGAT TGGGGCTGCTGGACCTTGCTCATAGGAAGCTGTATCGAGAT < 41bp 0.833853143809827 0.533978566915009 0.92168176 0.5782785 prediction 0.599749153789636 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44605023 chr19:44605025 nonsynonymous SNV 0.815 3 23 hm5C_associated_SNPs_54597 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr19:44604969-44605025
64251 chr19 44610970 44610970 1 + G T rs114131326 44610968 + 44610948 44610988 41 AATTCAGTCAGAGTTCACATCTGCAAACTCATCAGAGAGTC AATTCAGTCAGAGTTCACATCTTCAAACTCATCAGAGAGTC < 41bp 0.799855961430844 0.49771805227879 0.78417987 0.46310294 prediction 0.599711922861688 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610968 chr19:44610970 synonymous SNV . 0 23 hm5C_associated_SNPs_54599 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44610954-44610970
64251 chr12 132630210 132630210 1 + G T LUAD 132630207 + 132630187 132630227 41 GGCCACCCCTCCTTTCAGGTCAAGGTGGGTCATTGGGCTGG GGCCACCCCTCCTTTCAGGTCAATGTGGGTCATTGGGCTGG < 41bp 0.79985161338007 0.418451500493261 0.8388768 0.40493116 prediction 0.599703226760141 Functional Loss - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132630207 chr12:132630210 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_54601 0 0 3 PRPF8 POSTAR2 ENCODE chr12:132630199-132630238
64251 chr19 58101882 58101882 1 + G T LUSC 58101880 + 58101860 58101900 41 TTACCATCCAAGAGTCTACACTGGAAAAAAGCTTTATGAGT TTACCATCCAAGAGTCTACACTTGAAAAAAGCTTTATGAGT < 41bp 0.799835070459238 0.480393801052039 0.1340782 0.112329304 prediction 0.599670140918476 Functional Loss - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101880 chr19:58101882 stopgain 0.191 0 23 hm5C_associated_SNPs_54602 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58101850-58101882
64251 chr17 77709393 77709393 1 + G T LUAD 77709390 + 77709370 77709410 41 TACAAGAAGGAGGCGTTCCCCGAGGCCTTCCACTACGCCAA TACAAGAAGGAGGCGTTCCCCGATGCCTTCCACTACGCCAA < 41bp 0.887286868553599 0.587455299419616 0.9350335 0.6393663 prediction 0.599663138267966 Functional Loss - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77709390 chr17:77709393 nonsynonymous SNV 0.024 0 24 hm5C_associated_SNPs_54603 0 0 1 GRWD1 POSTAR2 ENCODE chr17:77709359-77709446
64251 chr3 14177355 14177355 1 + A T rs532872056 14177351 + 14177331 14177371 41 GGTGACCAGCTAGTCCCATTCTCCACCAAGTCTGGGGATAC GGTGACCAGCTAGTCCCATTCTCCTCCAAGTCTGGGGATAC < 41bp 0.863927710532732 0.564096480212608 0.9403258 0.13012964 prediction 0.599662460640248 Functional Loss - TMEM43 ENSG00000170876;ENSG00000268279 CDS Human other chr3:14177351 chr3:14177355 nonsynonymous SNV 0.933 3 25 hm5C_associated_SNPs_54604 1 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:14177339-14177377
64251 chr19 19656345 19656345 1 + G T LUSC 19656342 + 19656322 19656362 41 TGCGTGGAGTTCAAGTGCAGCGGGATGCTGTTCGACCAGCG TGCGTGGAGTTCAAGTGCAGCGGTATGCTGTTCGACCAGCG < 41bp 0.799821880454683 0.427509399464695 0.889687 0.53478545 prediction 0.599643760909367 Functional Loss - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19656342 chr19:19656345 synonymous SNV . 0 24 hm5C_associated_SNPs_54605 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:19656323-19656366
64251 chr19 45411901 45411901 1 + G T STAD 45411899 + 45411879 45411919 41 CACGGCTGTCCAAGGAGCTGCAGGCGGCGCAGGCCCGGCTG CACGGCTGTCCAAGGAGCTGCATGCGGCGCAGGCCCGGCTG < 41bp 0.837187075043235 0.537370095894289 0.8984225 0.35207206 prediction 0.599633958297892 Functional Loss - APOE ENSG00000130203 CDS Human protein_coding chr19:45411899 chr19:45411901 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_54606 0 0 13 DHX30 POSTAR2 ENCODE chr19:45411893-45411966
64251 chr12 104490197 104490197 1 + G T UCEC 104490195 + 104490175 104490215 41 CCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTGTAA CCGTGTAGAGACACATGCTACATCAACGCCGTTTTCTGTAA < 41bp 0.799815070792708 0.485049083669461 0.054823637 0.0657478 prediction 0.599630141585416 Functional Loss - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104490195 chr12:104490197 nonsynonymous SNV 0.575 0 23 hm5C_associated_SNPs_54607 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:104490170-104490199
64251 chr20 30345288 30345288 1 + A C UCEC 30345284 + 30345264 30345304 41 CGTTAAGTGGGAGACAATGTCACAAGTTAAAAGCTCTTATT CGTTAAGTGGGAGACAATGTCACACGTTAAAAGCTCTTATT < 41bp 0.799772973862693 0.396728652724818 0.56429607 0.41032732 prediction 0.599545947725386 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30345284 chr20:30345288 nonsynonymous SNV 0.811 3 25 hm5C_associated_SNPs_54615 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:30345265-30345291
64251 chr17 29281514 29281514 1 + A T LUAD 29281510 + 29281490 29281530 41 TTGCAGCAGAAAGAACCTTTCAAGAAAAGGTGGTTCGCCCT TTGCAGCAGAAAGAACCTTTCAAGTAAAGGTGGTTCGCCCT < 41bp 0.802210072635784 0.50244722127849 0.84584785 0.36350268 prediction 0.599525702714589 Functional Loss - ADAP2 ENSG00000184060 CDS Human protein_coding chr17:29281510 chr17:29281514 stopgain 1.000 1 25 hm5C_associated_SNPs_54618 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:29281500-29281520
64251 chr6 142468515 142468515 1 + G T UCEC 142468512 + 142468492 142468532 41 CGGCTCAGGAGCATGACAAGCGAGACCCTGTGGTGGCTTAT CGGCTCAGGAGCATGACAAGCGATACCCTGTGGTGGCTTAT < 41bp 0.866275720767497 0.56652575641983 0.71510446 0.23426023 prediction 0.599499928695334 Functional Loss - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142468512 chr6:142468515 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54620 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:142468476-142468529
64251 chr3 40553959 40553959 1 + A C COAD 40553955 + 40553935 40553975 41 AAGGGGAACTGCCATGGGGCCTCGATCCCTGGGAACCTATG AAGGGGAACTGCCATGGGGCCTCGCTCCCTGGGAACCTATG < 41bp 0.79974563557399 0.4071438420812 0.5840379 0.04823816 prediction 0.599491271147981 Functional Loss - ZNF620 ENSG00000177842 CDS Human protein_coding chr3:40553955 chr3:40553959 nonsynonymous SNV 0.642 0 25 hm5C_associated_SNPs_54621 0 0 1 PRPF8 POSTAR2 ENCODE chr3:40553942-40554038
64251 chr4 71824723 71824723 1 + A C OV 71824719 + 71824699 71824739 41 TCGGATGGCTGTCATGCTTCCTGAAGGGGAAGATCTCAATG TCGGATGGCTGTCATGCTTCCTGACGGGGAAGATCTCAATG < 41bp 0.799744038100149 0.405624780266145 0.24685448 0.10486156 prediction 0.599488076200298 Functional Loss - MOB1B ENSG00000173542 CDS Human protein_coding chr4:71824719 chr4:71824723 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_54622 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:71824709-71824731
64251 chr14 58727727 58727727 1 + G T UCEC 58727725 + 58727705 58727745 41 ACTCTACATGATTGACCCATCAGGTGTTTCATACGTGAGTA ACTCTACATGATTGACCCATCATGTGTTTCATACGTGAGTA < 41bp 0.820346100192781 0.520621270429172 0.8242067 0.23797518 prediction 0.599449659527219 Functional Loss - PSMA3 ENSG00000100567 CDS Human protein_coding chr14:58727725 chr14:58727727 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54627 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr14:58727668-58727727
64251 chr22 39910032 39910032 1 + A T PRAD 39910028 + 39910008 39910048 41 GGCTGCCGATCTCTGTGCCTCAAGATCCTCAAGGCCATATG GGCTGCCGATCTCTGTGCCTCAAGTTCCTCAAGGCCATATG < 41bp 0.801230673305981 0.501534828506467 0.946275 0.7032038 prediction 0.599391689599029 Functional Loss - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39910028 chr22:39910032 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_54631 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:39909947-39910079
64251 chr19 19655194 19655194 1 + G T UCEC 19655191 + 19655171 19655211 41 GGGTGACGTTCGTGGACCCCCGAGACCTCACCTCGGCGGCG GGGTGACGTTCGTGGACCCCCGATACCTCACCTCGGCGGCG < 41bp 0.890099366309634 0.590423861772189 0.8394537 0.18936646 prediction 0.599351009074889 Functional Loss - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19655191 chr19:19655194 nonsynonymous SNV 0.367 3 24 hm5C_associated_SNPs_54633 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:19655194-19655215
64251 chr11 111965589 111965589 1 + G T STAD 111965586 + 111965566 111965606 41 GATGCCTTGCAGAAAGCTGCCAAGGCAGGGCTTTTGGCACT GATGCCTTGCAGAAAGCTGCCAATGCAGGGCTTTTGGCACT < 41bp 0.873074119653059 0.573401655986708 0.36019617 0.10726681 prediction 0.599344927332701 Functional Loss - SDHD ENSG00000204370 CDS Human protein_coding chr11:111965586 chr11:111965589 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_54634 4 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:111965553-111965591
64251 chr14 94567102 94567102 1 + G T SARC 94567100 + 94567080 94567120 41 TCCAGGCAGGGCTGCTGTAGCAGCTGTGGTCGGAGGAGGTG TCCAGGCAGGGCTGCTGTAGCATCTGTGGTCGGAGGAGGTG < 41bp 0.79965743053034 0.475122260827185 0.5869472 0.19153184 prediction 0.599314861060681 Functional Loss - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94567100 chr14:94567102 nonsynonymous SNV 0.008 2 23 hm5C_associated_SNPs_54639 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:94567082-94567105
64251 chr1 161199615 161199615 1 + A T LUAD 161199611 + 161199591 161199631 41 CTGCAGATCTCCTGGAGCAGCGGCATCATGGCAGACAGGCC CTGCAGATCTCCTGGAGCAGCGGCTTCATGGCAGACAGGCC < 41bp 0.799623953171866 0.499531235515981 0.454288 0.47907194 prediction 0.599247906343731 Functional Loss - NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199611 chr1:161199615 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_54644 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:161199588-161199622
64251 chr2 176984014 176984014 1 + G T rs61070787 176984011 + 176983991 176984031 41 CAGGATTGGAGAGGGGGCACCGCGTTCCAGGGCCCAGTGCT CAGGATTGGAGAGGGGGCACCGCTTTCCAGGGCCCAGTGCT < 41bp 0.799602414861794 0.452429362133839 0.38785464 0.15887132 prediction 0.599204829723587 Functional Loss - HOXD10 ENSG00000128710 UTR3 Human protein_coding chr2:176984011 chr2:176984014 . . 0 24 hm5C_associated_SNPs_54646 1 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:176983986-176984014
64251 chr4 20482397 20482397 1 + G T HNSC 20482394 + 20482374 20482414 41 ATGGGGCATTCAGGGCTCTCCGGGACCTGGAAGTGCTGTAA ATGGGGCATTCAGGGCTCTCCGGTACCTGGAAGTGCTGTAA < 41bp 0.799599877720745 0.451442910207108 0.906099 0.43402815 prediction 0.59919975544149 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20482394 chr4:20482397 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_54647 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:20482367-20482403
64251 chr4 71554832 71554832 1 + A T ESCA 71554828 + 71554808 71554848 41 CACGGACTATGGTTCCAAGTCCCGAGGCCGGCAGAGTCAAC CACGGACTATGGTTCCAAGTCCCGTGGCCGGCAGAGTCAAC < 41bp 0.814679382772215 0.515080900419205 0.07521424 0.10243839 prediction 0.599196964706019 Functional Loss - UTP3 ENSG00000132467 CDS Human protein_coding chr4:71554828 chr4:71554832 synonymous SNV . 0 25 hm5C_associated_SNPs_54648 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:71554803-71554840
64251 chr17 21092067 21092067 1 + G T LAML 21092065 + 21092045 21092085 41 CCCAGGCTTTCTTTGACTGTCTGCGTGCCGAGATGGAACAG CCCAGGCTTTCTTTGACTGTCTTCGTGCCGAGATGGAACAG < 41bp 0.831197894750844 0.53161134374062 0.101139575 0.062047243 prediction 0.599173102020447 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21092065 chr17:21092067 synonymous SNV . 0 23 hm5C_associated_SNPs_54651 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:21092056-21092083
64251 chr7 99661969 99661969 1 + G T UCEC 99661966 + 99661946 99661986 41 TCGTCACTATCGGATCCACACTGGGGAGAAGCCTTATCAGT TCGTCACTATCGGATCCACACTGTGGAGAAGCCTTATCAGT < 41bp 0.799583269565841 0.416956757958052 0.26903665 0.09721616 prediction 0.599166539131682 Functional Loss - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99661966 chr7:99661969 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_54652 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99661951-99661979
64251 chr11 15197423 15197423 1 + G T LUAD 15197420 + 15197400 15197440 41 ATGCACAGGGTGACCTCATCCTGGCAGGTGGCCCTGGCCCT ATGCACAGGGTGACCTCATCCTGTCAGGTGGCCCTGGCCCT < 41bp 0.889091004134958 0.589529005718968 0.3789276 0.11755428 prediction 0.599123996831981 Functional Loss - INSC ENSG00000188487 CDS Human protein_coding chr11:15197420 chr11:15197423 nonsynonymous SNV 0.725 0 24 hm5C_associated_SNPs_54656 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:15197394-15197442
64251 chr1 156594403 156594403 1 + G T STAD 156594400 + 156594380 156594420 41 CGTCTCCCGCCAGCTTGGACCGAGGGTCTGGACTGGTGTAA CGTCTCCCGCCAGCTTGGACCGATGGTCTGGACTGGTGTAA < 41bp 0.889294176703716 0.589759818708438 0.9167317 0.44459718 prediction 0.599068715990557 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594400 chr1:156594403 nonsynonymous SNV 0.750 1 24 hm5C_associated_SNPs_54659 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr3 100447675 100447675 1 + G T PAAD 100447673 + 100447653 100447693 41 CTTGGAACCACCTGGAGAACCAGGACCTTCCACCAATATTC CTTGGAACCACCTGGAGAACCATGACCTTCCACCAATATTC < 41bp 0.805916142433511 0.50638249554741 0.4423595 0.069670856 prediction 0.599067293772203 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100447673 chr3:100447675 stopgain 0.993 1 23 hm5C_associated_SNPs_54660 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:100447669-100447696
64251 chr19 7589924 7589924 1 + G T UCEC 7589922 + 7589902 7589942 41 ACCGGCCCCTCCGACACCCCCAGAAGAGGAAGACCTTCGCC ACCGGCCCCTCCGACACCCCCATAAGAGGAAGACCTTCGCC < 41bp 0.819156759421247 0.519638187873961 0.9115962 0.6034919 prediction 0.599037143094572 Functional Loss - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7589922 chr19:7589924 stopgain 0.918 1 23 hm5C_associated_SNPs_54661 0 0 1 SF3B1 POSTAR2 ENCODE chr19:7589910-7589942
64251 chr3 49011195 49011195 1 + G T COAD 49011192 + 49011172 49011212 41 GCCACAATCCGGAAATGGCTCACGAAGTGTGCAGACGACTC GCCACAATCCGGAAATGGCTCACTAAGTGTGCAGACGACTC < 41bp 0.879047926432618 0.579532706114968 0.3068748 0.1616016 prediction 0.599030440635299 Functional Loss - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49011192 chr3:49011195 synonymous SNV . 0 24 hm5C_associated_SNPs_54662 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49011128-49011237
64251 chr11 65408823 65408823 1 + G T COAD 65408820 + 65408800 65408840 41 GAGCCACTCAGAGGCCAGCTCTGGGACCCTGGCTTCAGCCG GAGCCACTCAGAGGCCAGCTCTGTGACCCTGGCTTCAGCCG < 41bp 0.79945460322691 0.405778771495568 0.89767253 0.37282163 prediction 0.59890920645382 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408820 chr11:65408823 nonsynonymous SNV 0.880 2 24 hm5C_associated_SNPs_54671 0 0 1 RBM15 POSTAR2 ENCODE chr11:65408769-65408833
64251 chrX 152037431 152037431 1 + G T rs139186585 152037429 + 152037409 152037449 41 CCCAAGTACCACATCCCCTACTGGGTGGCCTACTACCTGGC CCCAAGTACCACATCCCCTACTTGGTGGCCTACTACCTGGC < 41bp 0.799436762381838 0.482318297769635 0.55233896 0.16883498 prediction 0.598873524763675 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037429 chrX:152037431 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_54673 0 0 2 RPS3 POSTAR2 ENCODE chrX:152037421-152037505
64251 chr1 228333299 228333299 1 + G T SARC 228333297 + 228333277 228333317 41 AAGAGGCTGCTCCAGGAGCACAGCGGCATCTTTGGCTTCAG AAGAGGCTGCTCCAGGAGCACATCGGCATCTTTGGCTTCAG < 41bp 0.799425732130895 0.479322849594535 0.7603074 0.36321288 prediction 0.59885146426179 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228333297 chr1:228333299 nonsynonymous SNV 0.741 1 23 hm5C_associated_SNPs_54674 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:228333200-228333300
64251 chr2 136540450 136540450 1 + A C COAD 136540446 + 136540426 136540466 41 CTTGGAATGGAAATTCCACTCAACAGATGTAGTGTGACAAG CTTGGAATGGAAATTCCACTCAACCGATGTAGTGTGACAAG < 41bp 0.799376116565161 0.426160972168089 0.22147554 0.100293815 prediction 0.598752233130321 Functional Loss - UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136540446 chr2:136540450 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_54675 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:136540372-136540540
64251 chr9 34249823 34249823 1 + G T LUAD 34249821 + 34249801 34249841 41 TCACAAGTGCCCAACATGCCCAGCTGTCCCCAGGCCTATTC TCACAAGTGCCCAACATGCCCATCTGTCCCCAGGCCTATTC < 41bp 0.838321222222904 0.538956009417409 0.2698202 0.02169168 prediction 0.598730425610988 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34249821 chr9:34249823 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_54677 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:34249796-34249832
64251 chr15 32976825 32976825 1 + G T LUAD 32976823 + 32976803 32976843 41 GTCGAGAGTTCCAGTTGCACCAGCATCTCTTTGATCCGGAA GTCGAGAGTTCCAGTTGCACCATCATCTCTTTGATCCGGAA < 41bp 0.799361658538973 0.488880533321219 0.15324175 0.087711155 prediction 0.598723317077945 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32976823 chr15:32976825 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_54678 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:32976808-32976840
64251 chr6 168299002 168299002 1 + G T PAAD 168299000 + 168298980 168299020 41 CGTGGAAGGCCAGCGCATCTCAGAAACCACCATGCTGCAGA CGTGGAAGGCCAGCGCATCTCATAAACCACCATGCTGCAGA < 41bp 0.836054037464094 0.536698399223324 0.8687848 0.123894036 prediction 0.598711276481541 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168299000 chr6:168299002 stopgain 0.834 1 23 hm5C_associated_SNPs_54680 0 0 11 DDX24 POSTAR2 ENCODE chr6:168298896-168299007
64251 chr12 1895188 1895188 1 + G T LAML 1895185 + 1895165 1895205 41 TCCATGGTGTCTCAAACCTCCAGGAGTTTCGTTTCATGATC TCCATGGTGTCTCAAACCTCCAGTAGTTTCGTTTCATGATC < 41bp 0.86992246382096 0.570589354945393 0.75642306 0.06149164 prediction 0.598666217751133 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1895185 chr12:1895188 stopgain 0.999 1 24 hm5C_associated_SNPs_54683 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:1895159-1895190
64251 chr21 45937638 45937638 1 + A C rs202122569 45937634 + 45937614 45937654 41 CTGTGGACATCACTCGCCTTCAGAACACTGAGCCCTCCTAC CTGTGGACATCACTCGCCTTCAGACCACTGAGCCCTCCTAC < 41bp 0.799332792037325 0.449290487528513 0.6848522 0.40454453 prediction 0.59866558407465 Functional Loss - TSPEAR-AS2 ENSG00000182912 UTR5 Human antisense chr21:45937634 chr21:45937638 . . 0 25 hm5C_associated_SNPs_54684 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:45937624-45937672
64251 chr22 47433094 47433094 1 + G T STAD 47433092 + 47433072 47433112 41 TCCGCCTGTGGGACACCTACCAGGTGAGCTCTCCTTCGCAC TCCGCCTGTGGGACACCTACCATGTGAGCTCTCCTTCGCAC < 41bp 0.79931998663057 0.478832564895605 0.9321998 0.3622275 prediction 0.598639973261141 Functional Loss - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47433092 chr22:47433094 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_54687 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:47433077-47433107
64251 chr12 120111862 120111862 1 + G T READ 120111859 + 120111839 120111879 41 CAGTGGACGCACGACCCTTCCGAGGTACTCTTCCTCCCACC CAGTGGACGCACGACCCTTCCGATGTACTCTTCCTCCCACC < 41bp 0.893434490843251 0.594117896991182 0.9001726 0.34815508 prediction 0.598633187704139 Functional Loss - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120111859 chr12:120111862 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_54688 0 0 4 PRPF8 POSTAR2 ENCODE chr12:120111843-120111926
64251 chr6 76376473 76376473 1 + G T LIHC 76376471 + 76376451 76376491 41 GATGACAACGACAGAACTAACAGAAGAGAAAGCATATCTCC GATGACAACGACAGAACTAACATAAGAGAAAGCATATCTCC < 41bp 0.82038033238963 0.521086792383634 0.33765036 0.19597715 prediction 0.598587080011992 Functional Loss - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76376471 chr6:76376473 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_54692 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:76376427-76376488
64251 chr3 141497180 141497180 1 + G T LUAD 141497178 + 141497158 141497198 41 TCGCCAACACCGCCTACCTGCAGGCCCGGAAGCCCTCGGAC TCGCCAACACCGCCTACCTGCATGCCCGGAAGCCCTCGGAC < 41bp 0.799260007620599 0.450028003725514 0.3883066 0.20431685 prediction 0.598520015241198 Functional Loss - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497178 chr3:141497180 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_54695 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141497156-141497199
64251 chr20 31021429 31021429 1 + G T LUAD 31021427 + 31021407 31021447 41 CATCCTCTGCAGCACCCGACCTGGAGGGTCCCGAATTCCCA CATCCTCTGCAGCACCCGACCTTGAGGGTCCCGAATTCCCA < 41bp 0.843140470216428 0.543884011807003 0.19211948 0.10624111 prediction 0.598512916818849 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021427 chr20:31021429 synonymous SNV . 0 23 hm5C_associated_SNPs_54696 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:31021389-31021447
64251 chr10 38645318 38645318 1 + A C rs564355864 38645314 + 38645294 38645334 41 TGGTGACGGGTGAGGCGGCCCGAAATCGTAGGACTTCCGAA TGGTGACGGGTGAGGCGGCCCGAACTCGTAGGACTTCCGAA < 41bp 0.799224622801317 0.446809664101463 0.08348858 0.07364398 prediction 0.598449245602633 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38645314 chr10:38645318 . . 0 25 hm5C_associated_SNPs_54700 0 0 1 NCBP2 POSTAR2 ENCODE chr10:38645316-38645378
64251 chr4 60031 60031 1 + G T COAD 60029 + 60009 60049 41 CAATTTGAAGATACATGAGACAGCAGCCAAACCCCCAGGTA CAATTTGAAGATACATGAGACATCAGCCAAACCCCCAGGTA < 41bp 0.799213732100942 0.492991225789805 0.3799712 0.10829204 prediction 0.598427464201884 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:60029 chr4:60031 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_54702 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:60022-60060
64251 chr17 21215491 21215491 1 + G T ACC 21215489 + 21215469 21215509 41 CTGCGGTTCCCTTACGAGTCCTGGGGGACCCCGTTCCAGCA CTGCGGTTCCCTTACGAGTCCTTGGGGACCCCGTTCCAGCA < 41bp 0.849421450266818 0.550261802885164 0.9055593 0.2758934 prediction 0.598319294763308 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21215489 chr17:21215491 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54703 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:21215481-21215513
64251 chr10 127434403 127434403 1 + G T LUAD 127434400 + 127434380 127434420 41 GCCGCCCTTTTATTATGTAACACGGGAAGGCTCATGCGGAT GCCGCCCTTTTATTATGTAACACTGGAAGGCTCATGCGGAT < 41bp 0.799153809104933 0.428636237896014 0.23002854 0.086226165 prediction 0.598307618209867 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127434400 chr10:127434403 synonymous SNV . 0 24 hm5C_associated_SNPs_54705 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:127434363-127434404
64251 chrX 129058966 129058966 1 + A C BRCA 129058962 + 129058942 129058982 41 GAGTACAGACGCTGGAAGAGCTAGAAGAGCTGGGAAAAGAA GAGTACAGACGCTGGAAGAGCTAGCAGAGCTGGGAAAAGAA < 41bp 0.799153555000272 0.38913706733397 0.24222884 0.14080179 prediction 0.598307110000544 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129058962 chrX:129058966 nonsynonymous SNV 0.934 1 25 hm5C_associated_SNPs_54706 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:129058906-129058972
64251 chr19 37118056 37118056 1 + G T UCEC 37118054 + 37118034 37118074 41 AGTGTGGGAAGGCATTTATCCAGAAGACAACCCTCACTGTT AGTGTGGGAAGGCATTTATCCATAAGACAACCCTCACTGTT < 41bp 0.814424223262162 0.515271770848364 0.7047993 0.06451377 prediction 0.598304904827595 Functional Loss - ZNF382 ENSG00000161298 CDS Human protein_coding chr19:37118054 chr19:37118056 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_54707 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:37118045-37118072
64251 chr7 141464473 141464473 1 + G T LGG 141464471 + 141464451 141464491 41 AGGAATGTGACTGAACACTTCAGAAAGAAGAGGAGTGAGTA AGGAATGTGACTGAACACTTCATAAAGAAGAGGAGTGAGTA < 41bp 0.79912735205474 0.490959222732123 0.40032902 0.106558055 prediction 0.598254704109481 Functional Loss - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464471 chr7:141464473 nonsynonymous SNV 0.402 3 23 hm5C_associated_SNPs_54709 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:141464415-141464479
64251 chr10 112039713 112039713 1 + G T UCEC 112039710 + 112039690 112039730 41 AGAAAAAGCCAGCACCAGCTCGAGAATTTGGAACGAGAACA AGAAAAAGCCAGCACCAGCTCGATAATTTGGAACGAGAACA < 41bp 0.799102340146933 0.430803777320472 0.36912578 0.10363376 prediction 0.598204680293865 Functional Loss - MXI1 ENSG00000119950 CDS Human protein_coding chr10:112039710 chr10:112039713 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_54712 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:112039705-112039752
64251 chr9 117405520 117405520 1 + G T UCEC 117405517 + 117405497 117405537 41 GACACGACACACGAACTCTCCGAGAATTCCATGCCCCTGCC GACACGACACACGAACTCTCCGATAATTCCATGCCCCTGCC < 41bp 0.878708841392836 0.579624523112987 0.87495995 0.18333808 prediction 0.598168636559697 Functional Loss - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117405517 chr9:117405520 nonsynonymous SNV 0.215 0 24 hm5C_associated_SNPs_54713 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:117405507-117405523
64251 chr13 45583014 45583014 1 + G T UCEC 45583012 + 45582992 45583032 41 GCAGAGATGATCCAGGACAACAGGTATCATCATCCCATTTC GCAGAGATGATCCAGGACAACATGTATCATCATCCCATTTC < 41bp 0.799057715042965 0.493788182233841 0.25843093 0.052200347 prediction 0.598115430085929 Functional Loss - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45583012 chr13:45583014 nonsynonymous SNV 0.779 0 23 hm5C_associated_SNPs_54716 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr13:45582985-45583014
64251 chr11 75277906 75277906 1 + A T LUSC 75277902 + 75277882 75277922 41 TCCGCGACAAGCGCAGCGCGCTGCAGTCCATCAACGAGTGG TCCGCGACAAGCGCAGCGCGCTGCTGTCCATCAACGAGTGG < 41bp 0.799057037684539 0.477090943082263 0.09521592 0.027786195 prediction 0.598114075369078 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277902 chr11:75277906 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_54717 0 0 7 DDX6 POSTAR2 ENCODE chr11:75277881-75277924
64251 chr1 236343240 236343240 1 + G T UCEC 236343237 + 236343217 236343257 41 CGTGATACTGCTTTACACCTCTCGGGCCTGCTACAACCTGT CGTGATACTGCTTTACACCTCTCTGGCCTGCTACAACCTGT < 41bp 0.799025444041955 0.423387321174484 0.090177655 0.041634023 prediction 0.598050888083911 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236343237 chr1:236343240 nonsynonymous SNV 0.976 4 24 hm5C_associated_SNPs_54721 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:236343220-236343258
64251 chr12 1741857 1741857 1 + G T LUSC 1741854 + 1741834 1741874 41 TTGAACCCGGTGCAGAGACCCGAGATGTTTATCATCGGTGC TTGAACCCGGTGCAGAGACCCGATATGTTTATCATCGGTGC < 41bp 0.885832149752147 0.586811386788966 0.5832613 0.13510829 prediction 0.598041525926363 Functional Loss - WNT5B ENSG00000111186 CDS Human protein_coding chr12:1741854 chr12:1741857 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_54723 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:1741828-1741860
64251 chr1 37947279 37947279 1 + G T ESCA 37947276 + 37947256 37947296 41 CACGACGCGTGGGTGGCAAGCGGGTGGTGTGCTATGACGAC CACGACGCGTGGGTGGCAAGCGGTTGGTGTGCTATGACGAC < 41bp 0.799020391391858 0.406006373371353 0.8675729 0.30865794 prediction 0.598040782783716 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37947276 chr1:37947279 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_54724 0 0 1 BUD13 POSTAR2 ENCODE chr1:37947202-37947290
64251 chr17 43226693 43226693 1 + A C SKCM 43226689 + 43226669 43226709 41 GAGCGGGTGCCCGAGGAGGACAGTAGGTGGCAATCGAGAGC GAGCGGGTGCCCGAGGAGGACAGTCGGTGGCAATCGAGAGC < 41bp 0.882835259979052 0.583832936210298 0.33212173 0.36032128 prediction 0.598004647537509 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226689 chr17:43226693 synonymous SNV . 0 25 hm5C_associated_SNPs_54727 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:43226684-43226704
64251 chr6 34825589 34825589 1 + G T OV 34825587 + 34825567 34825607 41 TCTGGGGAAACCTCTTTTGCCTGGATTTATACCGCAGCTTG TCTGGGGAAACCTCTTTTGCCTTGATTTATACCGCAGCTTG < 41bp 0.798997209440049 0.485185116045498 0.23396024 0.076762915 prediction 0.597994418880097 Functional Loss - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34825587 chr6:34825589 synonymous SNV . 0 23 hm5C_associated_SNPs_54728 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:34825569-34825597
64251 chr17 27382858 27382858 1 + G T LUSC 27382855 + 27382835 27382875 41 CCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTAT CCCCTGATGAGCAGTTCATTCTCTATCGCCACCCAAAGTAT < 41bp 0.881614788215365 0.582644750571566 0.30558434 0.90751535 prediction 0.597940075287597 Functional Loss - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27382855 chr17:27382858 nonsynonymous SNV 0.978 5 24 hm5C_associated_SNPs_54730 0 0 1 GRWD1 POSTAR2 ENCODE chr17:27382836-27382881
64251 chr8 86044041 86044041 1 + G T LUSC 86044038 + 86044018 86044058 41 TTTTTACTGATGCTGACTTCCAGGATGCCTTAGCTAAAGAA TTTTTACTGATGCTGACTTCCAGTATGCCTTAGCTAAAGAA < 41bp 0.868180287350959 0.56921547638825 0.806244 0.0479708 prediction 0.597929621925418 Functional Loss - LRRCC1 ENSG00000133739 CDS Human protein_coding chr8:86044038 chr8:86044041 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_54731 0 0 3 BUD13 POSTAR2 ENCODE chr8:86044023-86044132
64251 chr14 64926620 64926620 1 + A C rs1801340 64926616 + 64926596 64926636 41 ACTAATAGTAGGAGTTTCCCCAGAAGTCATTTTCAGCCTTA ACTAATAGTAGGAGTTTCCCCAGACGTCATTTTCAGCCTTA < 41bp 0.864848636564045 0.565898730158287 0.40183273 0.42018366 prediction 0.597899812811516 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64926616 chr14:64926620 nonsynonymous SNV 0.128 1 25 hm5C_associated_SNPs_54733 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:64926599-64926716
64251 chr18 3456467 3456467 1 + G T LAML 3456464 + 3456444 3456484 41 AGGAGAAGGGGCAACCTACCCAAGGAGTCTGTGCAGATTCT AGGAGAAGGGGCAACCTACCCAATGAGTCTGTGCAGATTCT < 41bp 0.798941141157822 0.441658235060677 0.6224538 0.07431665 prediction 0.597882282315644 Functional Loss - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3456464 chr18:3456467 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_54734 0 0 11 TARBP2 POSTAR2 GSE49648,GSM1204358 chr18:3456460-3456480
64251 chr20 61598073 61598073 1 + G T LUAD 61598071 + 61598051 61598091 41 ACAGGTGTGGCCAACACAGCCGGGGCCTTGGCAGGTGAGGG ACAGGTGTGGCCAACACAGCCGTGGCCTTGGCAGGTGAGGG < 41bp 0.798937826561001 0.476519953567594 0.9003048 0.51144767 prediction 0.597875653122002 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598071 chr20:61598073 nonsynonymous SNV 0.749 4 23 hm5C_associated_SNPs_54735 0 0 5 BUD13 POSTAR2 ENCODE chr20:61598052-61598097
64251 chr17 65716058 65716058 1 + G T LUAD 65716055 + 65716035 65716075 41 GGAATAATGAAGATGTAAACCTGGATAAAGTATTTAAAGCT GGAATAATGAAGATGTAAACCTGTATAAAGTATTTAAAGCT < 41bp 0.798937629378081 0.465853606270819 0.16765243 0.102199525 prediction 0.597875258756163 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65716055 chr17:65716058 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_54736 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65716017-65716064
64251 chr11 8709867 8709867 1 + G T rs111592458 8709864 + 8709844 8709884 41 TTAATGGCTACCTTCTTCCCCAGGAGTTGTTAGGCCATCCG TTAATGGCTACCTTCTTCCCCAGTAGTTGTTAGGCCATCCG < 41bp 0.838510533912372 0.539573202307537 0.6835012 0.086013496 prediction 0.59787466320967 Functional Loss - RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8709864 chr11:8709867 . . 0 24 hm5C_associated_SNPs_54737 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8709837-8709938
64251 chr7 66240263 66240263 1 + G T UCEC 66240260 + 66240240 66240280 41 TTGCCAGCAGTCAGAGCAGCCAAGGGGCCCAATCCCTCACA TTGCCAGCAGTCAGAGCAGCCAATGGGCCCAATCCCTCACA < 41bp 0.798916033283187 0.421068920397912 0.9231789 0.6784831 prediction 0.597832066566375 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66240260 chr7:66240263 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_54739 0 0 3 GRWD1 POSTAR2 ENCODE chr7:66240224-66240334
64251 chr2 241808422 241808422 1 + G T LUAD 241808420 + 241808400 241808440 41 GCCGGGGGGCTGCAGATGATCGGGTCCATGAGCAAGGATAT GCCGGGGGGCTGCAGATGATCGTGTCCATGAGCAAGGATAT < 41bp 0.845471944153263 0.546572904718858 0.80804706 0.12015894 prediction 0.597798078868812 Functional Loss - AGXT ENSG00000172482 CDS Human protein_coding chr2:241808420 chr2:241808422 nonsynonymous SNV 0.147 5 23 hm5C_associated_SNPs_54744 0 0 3 BUD13 POSTAR2 ENCODE chr2:241808374-241808429
64251 chr7 99227358 99227358 1 + G T BLCA 99227356 + 99227336 99227376 41 GGCAGCACCTGCAGGTGCACCGGAGGACGCACACCGGGGAG GGCAGCACCTGCAGGTGCACCGTAGGACGCACACCGGGGAG < 41bp 0.798886928796228 0.469675588410285 0.89833426 0.36390048 prediction 0.597773857592456 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99227356 chr7:99227358 synonymous SNV . 0 23 hm5C_associated_SNPs_54746 0 0 1 SLTM POSTAR2 ENCODE chr7:99227335-99227386
64251 chr10 70742369 70742369 1 + G T UCEC 70742366 + 70742346 70742386 41 GCAACCAGAACTGGAAGGACCACGGGAAGGATATGGAGGCT GCAACCAGAACTGGAAGGACCACTGGAAGGATATGGAGGCT < 41bp 0.872310500504539 0.573438110007846 0.51378304 0.3166371 prediction 0.597744780993385 Functional Loss - DDX21 ENSG00000165732 CDS Human protein_coding chr10:70742366 chr10:70742369 nonsynonymous SNV 0.197 0 24 hm5C_associated_SNPs_54748 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr10:70742307-70742400
64251 chr17 28512652 28512652 1 + G T PRAD 28512649 + 28512629 28512669 41 GTACTTGGCCAGGCAGATGGCGCGGGTTAATGCAAAGACCT GTACTTGGCCAGGCAGATGGCGCTGGTTAATGCAAAGACCT < 41bp 0.864695116478107 0.565864267612056 0.6907724 0.2046274 prediction 0.597661697732102 Functional Loss - NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28512649 chr17:28512652 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_54752 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:28512620-28512654
64251 chr7 100276202 100276202 1 + G T SARC 100276200 + 100276180 100276220 41 GCTGGCTACGACGACTTCAACTGCAACATCTGGGATGCCAT GCTGGCTACGACGACTTCAACTTCAACATCTGGGATGCCAT < 41bp 0.817815695581555 0.519000331351243 0.20541161 0.06281057 prediction 0.597630728460625 Functional Loss - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100276200 chr7:100276202 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54755 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:100276180-100276221
64251 chr3 33840142 33840142 1 + A C rs368948546 33840138 + 33840118 33840158 41 AGCCAGTCAGTCCGCCAGTCCGCCAGCCCAGTACCTCTCTC AGCCAGTCAGTCCGCCAGTCCGCCCGCCCAGTACCTCTCTC < 41bp 0.798801530640817 0.478910989872795 0.28766185 0.11593872 prediction 0.597603061281635 Functional Loss - PDCD6IP ENSG00000170248 UTR5 Human protein_coding chr3:33840138 chr3:33840142 . . 0 25 hm5C_associated_SNPs_54760 0 0 5 DDX3X POSTAR2 ENCODE chr3:33840112-33840161
64251 chr12 31244682 31244682 1 + G T STAD 31244680 + 31244660 31244700 41 TGCTGCCCTATCAGATGCTGCTGCATGCGGCCACTCGGCAG TGCTGCCCTATCAGATGCTGCTTCATGCGGCCACTCGGCAG < 41bp 0.816875047278069 0.51807537707035 0.85868305 0.40619975 prediction 0.597599340415439 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244680 chr12:31244682 synonymous SNV . 0 23 hm5C_associated_SNPs_54761 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:31244660-31244700
64251 chr1 32557320 32557320 1 + G C LUAD 32557319 + 32557299 32557339 41 TGCAGCTGAATTGCGACCTCCGCAAGACAAGCCTCTTCAAC TGCAGCTGAATTGCGACCTCCCCAAGACAAGCCTCTTCAAC < 41bp 0.801593525351815 0.502815916295153 0.090032786 0.078823864 prediction 0.597555218113323 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32557319 chr1:32557320 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_54762 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32557289-32557322
64251 chr1 25611072 25611072 1 + G T UCEC 25611069 + 25611049 25611089 41 CTCCCCACCGAGCAGTTGGCCAAGATCTGACCGTGATGGCG CTCCCCACCGAGCAGTTGGCCAATATCTGACCGTGATGGCG < 41bp 0.798768673160995 0.422987511877912 0.19495246 0.07025179 prediction 0.59753734632199 Functional Loss - RHD ENSG00000187010 CDS Human protein_coding chr1:25611069 chr1:25611072 nonsynonymous SNV 0.005 4 24 hm5C_associated_SNPs_54765 0 0 1 BUD13 POSTAR2 ENCODE chr1:25611034-25611104
64251 chr4 74319522 74319522 1 + G T THYM 74319520 + 74319500 74319540 41 GAAGCAAAAGCCACAAATAACAGAGGAACAACTTGAGGCTG GAAGCAAAAGCCACAAATAACATAGGAACAACTTGAGGCTG < 41bp 0.798757505300488 0.478112290631906 0.9422072 0.8904418 prediction 0.597515010600976 Functional Loss - AFP ENSG00000081051 CDS Human protein_coding chr4:74319520 chr4:74319522 stopgain 0.986 0 23 hm5C_associated_SNPs_54767 0 0 1 DHX30 POSTAR2 ENCODE chr4:74319507-74319528
64251 chr11 15262041 15262041 1 + G T SARC 15262039 + 15262019 15262059 41 AGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGT AGATCCCCATCAGAGAGGAACATCAGTGACGCCGTGCTTGT < 41bp 0.798755685373167 0.469103985528559 0.34425625 0.27907735 prediction 0.597511370746334 Functional Loss - INSC ENSG00000188487 CDS Human protein_coding chr11:15262039 chr11:15262041 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_54768 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585664 chr11:15262040-15262060
64251 chr10 101578643 101578643 1 + G T LUSC 101578641 + 101578621 101578661 41 TCTTCTAGATGACCCCCTGTCTGCAGTGGATGCTCATGTAG TCTTCTAGATGACCCCCTGTCTTCAGTGGATGCTCATGTAG < 41bp 0.798747336463444 0.4925879599106 0.051501572 0.027693868 prediction 0.597494672926888 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101578641 chr10:101578643 nonsynonymous SNV 0.673 5 23 hm5C_associated_SNPs_54771 0 0 3 GRWD1 POSTAR2 ENCODE chr10:101578619-101578663
64251 chr10 11797576 11797576 1 + G T LUAD 11797573 + 11797553 11797593 41 CGGGCTCTTCTGTTCTACCCCTGGGGTTGCCTTGGCAAGAG CGGGCTCTTCTGTTCTACCCCTGTGGTTGCCTTGGCAAGAG < 41bp 0.8868513871245 0.588139140043898 0.7814189 0.33106703 prediction 0.597424494161204 Functional Loss - ECHDC3 ENSG00000134463 CDS Human protein_coding chr10:11797573 chr10:11797576 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_54774 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr10:11797540-11797579
64251 chr1 65145414 65145414 1 + G T UCEC 65145412 + 65145392 65145432 41 AGATTCATCGCCGGAGCCATCAGCATATGTCTCCTCTTGCT AGATTCATCGCCGGAGCCATCATCATATGTCTCCTCTTGCT < 41bp 0.798649936363044 0.474657983757115 0.7242496 0.17245954 prediction 0.597299872726089 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65145412 chr1:65145414 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_54780 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:65145407-65145430
64251 chr16 84690791 84690791 1 + G T LUAD 84690789 + 84690769 84690809 41 TCCTGGAGACGGCTCACCTGCTGCAGATCTGGACGGTGGTA TCCTGGAGACGGCTCACCTGCTTCAGATCTGGACGGTGGTA < 41bp 0.826674687948568 0.528035582982369 0.24833432 0.2679736 prediction 0.597278209932398 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84690789 chr16:84690791 synonymous SNV . 0 23 hm5C_associated_SNPs_54782 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84690764-84690794
64251 chr19 58982329 58982329 1 + G T SARC 58982327 + 58982307 58982347 41 GGCTCAGGCAGTGGGCAAGCCAGCGTCAGCCTGCGACTGAC GGCTCAGGCAGTGGGCAAGCCATCGTCAGCCTGCGACTGAC < 41bp 0.840994574371189 0.542369451875166 0.8258647 0.17644256 prediction 0.597250244992047 Functional Loss - ZNF324 ENSG00000083812 CDS Human protein_coding chr19:58982327 chr19:58982329 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_54786 0 0 1 EIF3H POSTAR2 ENCODE chr19:58982294-58982363
64251 chr19 34868446 34868446 1 + G T GBM 34868443 + 34868423 34868463 41 GACTGGAAGGGGTACACAGGCAAGACCATCACGGACGTCAT GACTGGAAGGGGTACACAGGCAATACCATCACGGACGTCAT < 41bp 0.798620996069395 0.420105456333677 0.22526678 0.18711415 prediction 0.597241992138791 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34868443 chr19:34868446 nonsynonymous SNV 0.598 5 24 hm5C_associated_SNPs_54787 0 0 22 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:34868400-34868460
64251 chr4 39217572 39217572 1 + G T SARC 39217570 + 39217550 39217590 41 CCCATACTTGGGGATGCCTGCAGCACAAGGATTGCCTATCT CCCATACTTGGGGATGCCTGCATCACAAGGATTGCCTATCT < 41bp 0.798604117090232 0.482774428317972 0.16750288 0.038217574 prediction 0.597208234180464 Functional Loss - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39217570 chr4:39217572 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_54788 0 0 1 GRWD1 POSTAR2 ENCODE chr4:39217507-39217579
64251 chr7 102949419 102949419 1 + G T UCEC 102949416 + 102949396 102949436 41 TAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCT TAGATTCGTGTGAGGGATGACAATATGCCTTTGGCGCACCT < 41bp 0.798566743178374 0.434461645434221 0.6770529 0.12102923 prediction 0.597133486356749 Functional Loss - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102949416 chr7:102949419 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_54790 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:102949402-102949425
64251 chr7 7636043 7636043 1 + A T BRCA 7636039 + 7636019 7636059 41 TGGCTGTCGAAAACCACTTCCTCGATGTGCGCTTTGTCTCA TGGCTGTCGAAAACCACTTCCTCGTTGTGCGCTTTGTCTCA < 41bp 0.845197001913264 0.546660799638547 0.92062706 0.021541119 prediction 0.597072404549435 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7636039 chr7:7636043 synonymous SNV . 0 25 hm5C_associated_SNPs_54796 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:7636015-7636058
64251 chr10 45877967 45877967 1 + G T LUAD 45877964 + 45877944 45877984 41 ACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTC ACGTGACTGTGGACGAGGAACTGTGCGAGATCCAGCTGGTC < 41bp 0.798519400648009 0.41212484433692 0.888337 0.6169024 prediction 0.597038801296017 Functional Loss - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45877964 chr10:45877967 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_54797 0 0 1 DDX24 POSTAR2 ENCODE chr10:45877951-45877994
64251 chrX 103411502 103411502 1 + G T UCEC 103411499 + 103411479 103411519 41 GCCTCGGCCATCACTTCCTACGAGAAGTTTCTAACCCCCGA GCCTCGGCCATCACTTCCTACGATAAGTTTCTAACCCCCGA < 41bp 0.873407925982996 0.574895220055385 0.18491295 0.017835319 prediction 0.597025411855222 Functional Loss - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411499 chrX:103411502 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_54798 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103411476-103411502
64251 chr10 135279765 135279765 1 + G T SARC 135279763 + 135279743 135279783 41 TGGCCCAGGCCCCCCACTGCCTGCAGCTCCCTTCCGGACAT TGGCCCAGGCCCCCCACTGCCTTCAGCTCCCTTCCGGACAT < 41bp 0.842800602931879 0.544298140427192 0.8697834 0.80724263 prediction 0.597004925009375 Functional Loss - SCART1 ENSG00000214279 ncRNA_exonic Human protein_coding chr10:135279763 chr10:135279765 . . 0 23 hm5C_associated_SNPs_54801 0 0 2 HNRNPC POSTAR2 SRX1438577 chr10:135279741-135279779
64251 chr16 84690870 84690870 1 + G T LUAD 84690867 + 84690847 84690887 41 AGGACAACTACCTGTACCTGCAGGAGCTGGCCTCCATCTAC AGGACAACTACCTGTACCTGCAGTAGCTGGCCTCCATCTAC < 41bp 0.890384895600351 0.591889038534797 0.42054498 0.044419974 prediction 0.596991714131108 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84690867 chr16:84690870 stopgain 1.000 1 24 hm5C_associated_SNPs_54803 0 0 1 FMR1 POSTAR2 ENCODE chr16:84690837-84690900
64251 chr1 227922866 227922866 1 - C A rs201199352 227922868 - 227922848 227922888 41 GGTAGCCTTCGTCTCGGAGCCGGGCGCCTTCTCCTACGCCG GGTAGCCTTCGTCTCGGAGCCGTGCGCCTTCTCCTACGCCG < 41bp 0.848947749052977 0.550453951683761 0.90667295 0.073718876 prediction 0.596987594738431 Functional Loss - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227922868 chr1:227922866 nonsynonymous SNV 0.010 0 23 hm5C_associated_SNPs_54804 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:227922853-227922881
64251 chr15 94841816 94841816 1 + G T KIRC 94841813 + 94841793 94841833 41 AAGAAGAATTGGATTGGAGCCAGGAAGAAGCCAGTCACCTC AAGAAGAATTGGATTGGAGCCAGTAAGAAGCCAGTCACCTC < 41bp 0.813136115807792 0.514710255069872 0.7813771 0.8111762 prediction 0.59685172147584 Functional Loss - MCTP2 ENSG00000140563 CDS Human protein_coding chr15:94841813 chr15:94841816 stopgain 0.998 1 24 hm5C_associated_SNPs_54812 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:94841791-94841817
64251 chr7 66236966 66236966 1 + G T STAD 66236964 + 66236944 66236984 41 AAGAAAGGATGTGGTTACTACGGCAACCCTGCCTGGCAGGG AAGAAAGGATGTGGTTACTACGTCAACCCTGCCTGGCAGGG < 41bp 0.831582020887176 0.533170342587523 0.28696918 0.08548823 prediction 0.596823356599306 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66236964 chr7:66236966 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_54814 0 0 2 UCHL5 POSTAR2 ENCODE chr7:66236885-66237009
64251 chr16 72133735 72133735 1 + G T LUAD 72133733 + 72133713 72133753 41 TGAGGAGGCGGGAGCAGCACCTGCATAAACAGAAGCAGAAG TGAGGAGGCGGGAGCAGCACCTTCATAAACAGAAGCAGAAG < 41bp 0.816103302444675 0.517703993693107 0.61335397 0.37065718 prediction 0.596798617503137 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72133733 chr16:72133735 synonymous SNV . 0 23 hm5C_associated_SNPs_54816 0 0 4 FMR1 POSTAR2 ENCODE chr16:72133706-72133742
64251 chr2 219267782 219267782 1 + G T LUAD 219267779 + 219267759 219267799 41 TCTACGTGTTGAAGCGTCCTCACGTGGATGAGTTCCTGCAG TCTACGTGTTGAAGCGTCCTCACTTGGATGAGTTCCTGCAG < 41bp 0.79839429088988 0.41993445591103 0.46519986 0.047591984 prediction 0.596788581779761 Functional Loss - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219267779 chr2:219267782 nonsynonymous SNV 0.983 4 24 hm5C_associated_SNPs_54817 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:219267782-219267821
64251 chr5 140475971 140475971 1 + G T LUAD 140475968 + 140475948 140475988 41 CCCTGCAGGCGTTCGAGTTCCGCGTGGGCGCCGCAGACCGC CCCTGCAGGCGTTCGAGTTCCGCTTGGGCGCCGCAGACCGC < 41bp 0.884624241834623 0.586253323197353 0.27688223 0.021248251 prediction 0.596741837274539 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475968 chr5:140475971 nonsynonymous SNV 0.561 3 24 hm5C_associated_SNPs_54819 0 0 1 SND1 POSTAR2 ENCODE chr5:140475968-140475991
64251 chr7 134346662 134346662 1 + G T UCEC 134346659 + 134346639 134346679 41 AGGAGTCTCATCCTTACTACCAAGAAATCTACAACGACCGG AGGAGTCTCATCCTTACTACCAATAAATCTACAACGACCGG < 41bp 0.883022183078139 0.584674760822533 0.7848645 0.43000746 prediction 0.596694844511211 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346659 chr7:134346662 stopgain 0.072 1 24 hm5C_associated_SNPs_54822 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:134346634-134346662
64251 chr11 57405933 57405933 1 + G T rs116473143 57405931 + 57405911 57405951 41 GGCAGAGGAGAGGGTCTCCGCGGCCCACCGGCCTCGCAACC GGCAGAGGAGAGGGTCTCCGCGTCCCACCGGCCTCGCAACC < 41bp 0.811148432891105 0.512844955647853 0.1665917 0.06592274 prediction 0.596606954486503 Functional Loss - SERPING1;MIR130A ENSG00000254602 ncRNA_exonic Human sense_overlapping chr11:57405931 chr11:57405933 . . 0 23 hm5C_associated_SNPs_54827 0 0 5 DGCR8 POSTAR2 ENCODE chr11:57405901-57405933
64251 chr2 239002529 239002529 1 + G C BLCA 239002528 + 239002508 239002548 41 GAGCTGGTGACCCAGAACTGCGAGGCTTATGAGGCCCACAT GAGCTGGTGACCCAGAACTGCCAGGCTTATGAGGCCCACAT < 41bp 0.800793282125806 0.502491367616403 0.8924271 0.6678459 prediction 0.596603829018805 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:239002528 chr2:239002529 nonsynonymous SNV 0.100 0 22 hm5C_associated_SNPs_54828 0 0 3 PPIG POSTAR2 ENCODE chr2:239002494-239002596
64251 chrX 46322728 46322728 1 + G T UCEC 46322726 + 46322706 46322746 41 GACCCCGGTACGGACCTGTGCAGGTGAGGACAGGCCAGGTG GACCCCGGTACGGACCTGTGCATGTGAGGACAGGCCAGGTG < 41bp 0.847729579377312 0.549435604995331 0.8169615 0.3111633 prediction 0.596587948763963 Functional Loss - KRBOX4 ENSG00000147121 CDS Human protein_coding chrX:46322726 chrX:46322728 stopgain 0.191 2 23 hm5C_associated_SNPs_54829 0 0 3 GRWD1 POSTAR2 ENCODE chrX:46322647-46322742
64251 chr19 35501012 35501012 1 + G T KIRC 35501010 + 35500990 35501030 41 TCTCAGATTACTCCTGCGCCCTGCAGCGTGAGATCCTGCTC TCTCAGATTACTCCTGCGCCCTTCAGCGTGAGATCCTGCTC < 41bp 0.83187493122247 0.533582779628818 0.116149336 0.058220953 prediction 0.596584303187306 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501010 chr19:35501012 synonymous SNV . 0 23 hm5C_associated_SNPs_54830 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35500995-35501019
64251 chr2 27121538 27121538 1 + G T LUAD 27121536 + 27121516 27121556 41 TGATTGATGCCACAGGAAAACTGGTGATCCCTGGTGGCATC TGATTGATGCCACAGGAAAACTTGTGATCCCTGGTGGCATC < 41bp 0.841511999055266 0.543231133282477 0.7170399 0.18741968 prediction 0.596561731545578 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27121536 chr2:27121538 synonymous SNV . 0 23 hm5C_associated_SNPs_54832 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27121517-27121538
64251 chr11 65735028 65735028 1 + G T rs538739713 65735025 + 65735005 65735045 41 GCCCCTGCCGTCGGACGACACCCGAGTGGAGAACATGGACA GCCCCTGCCGTCGGACGACACCCTAGTGGAGAACATGGACA < 41bp 0.798259962386807 0.416010361176687 0.2452366 0.0788663 prediction 0.596519924773614 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65735025 chr11:65735028 nonsynonymous SNV 0.855 1 24 hm5C_associated_SNPs_54836 0 0 6 FMR1 POSTAR2 ENCODE chr11:65734988-65735033
64251 chr9 131482026 131482026 1 + G T LUSC 131482023 + 131482003 131482043 41 ACCCCGGAGTTCCTGGCTCCCGAGGTGCTGACCCAGGAGGC ACCCCGGAGTTCCTGGCTCCCGATGTGCTGACCCAGGAGGC < 41bp 0.891367244108233 0.593107449075094 0.9259053 0.58707094 prediction 0.596519590066279 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131482023 chr9:131482026 nonsynonymous SNV 0.402 3 24 hm5C_associated_SNPs_54837 0 0 2 PPIG POSTAR2 ENCODE chr9:131481964-131482029
64251 chr20 55100024 55100024 1 + G T UCEC 55100021 + 55100001 55100041 41 AGAATCTACCAGAGCACACCCAAGGCTGGCTTGGGAGCAAA AGAATCTACCAGAGCACACCCAATGCTGGCTTGGGAGCAAA < 41bp 0.798258384224033 0.413868697024931 0.8625555 0.5299816 prediction 0.596516768448066 Functional Loss - FAM209A ENSG00000124103 CDS Human protein_coding chr20:55100021 chr20:55100024 nonsynonymous SNV 0.130 3 24 hm5C_associated_SNPs_54838 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:55099992-55100030
64251 chr14 29236541 29236541 1 + G T HNSC 29236539 + 29236519 29236559 41 ATGATCCCCAAGTCCTCGTTCAGCATCAACAGCCTGGTGCC ATGATCCCCAAGTCCTCGTTCATCATCAACAGCCTGGTGCC < 41bp 0.827800171566395 0.529546223569261 0.39263844 0.17915258 prediction 0.596507895994269 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29236539 chr14:29236541 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_54839 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:29236521-29236550
64251 chr11 47350675 47350675 1 + A C rs552599871 47350671 + 47350651 47350691 41 CATAGCAGTGAGGAAGATCTCAGAACCCCGCCCCGGCCTGT CATAGCAGTGAGGAAGATCTCAGACCCCCGCCCCGGCCTGT < 41bp 0.798232179229637 0.439043489810488 0.8811135 0.87324286 prediction 0.596464358459273 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47350671 chr11:47350675 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_54843 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:47350655-47350683
64251 chr5 10649841 10649841 1 + G T rs551808813 10649839 + 10649819 10649859 41 ATGAGGTGGGGGGCGCGGGGCAGCGCGGGCGGACCGGACAG ATGAGGTGGGGGGCGCGGGGCATCGCGGGCGGACCGGACAG < 41bp 0.83685625085386 0.538629445986272 0.88658434 0.89622396 prediction 0.596453609735178 Functional Loss - ANKRD33B ENSG00000164236 CDS Human protein_coding chr5:10649839 chr5:10649841 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_54846 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:10649840-10649860
64251 chr17 73820437 73820437 1 + G T SARC 73820435 + 73820415 73820455 41 CACGCTGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGTG CACGCTGCGCTGTGTGAGCTCTTCGCTGAGGGCAGCGAGTG < 41bp 0.823872138118659 0.52565420460967 0.23029697 0.26490068 prediction 0.596435867017979 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73820435 chr17:73820437 nonsynonymous SNV 0.976 3 23 hm5C_associated_SNPs_54849 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:73820416-73820440
64251 chr17 19555013 19555013 1 + G T STAD 19555010 + 19554990 19555030 41 CCTATATTCAGCCACAGCCTCTGGGAGTGGTGCTGATAATC CCTATATTCAGCCACAGCCTCTGTGAGTGGTGCTGATAATC < 41bp 0.798217484957562 0.413689267692238 0.6787255 0.22889441 prediction 0.596434969915123 Functional Loss - ALDH3A2 ENSG00000072210 CDS Human protein_coding chr17:19555010 chr17:19555013 stopgain 0.998 1 24 hm5C_associated_SNPs_54850 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:19554993-19555024
64251 chr19 7712288 7712288 1 + G T LUAD 7712285 + 7712265 7712305 41 AACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCAT AACAAGGCTGGCATAGAAGCCCGTGCGGGCCCCCGGCTCAT < 41bp 0.798204812635164 0.447877337846499 0.85960937 0.38293892 prediction 0.596409625270327 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712285 chr19:7712288 synonymous SNV . 0 24 hm5C_associated_SNPs_54852 0 0 2 FMR1 POSTAR2 ENCODE chr19:7712272-7712387
64251 chr5 131607056 131607056 1 + G T UCEC 131607053 + 131607033 131607073 41 TGCAGAGTCGACCTGGGCTCCGAGGTGTACAGGATGCTGCG TGCAGAGTCGACCTGGGCTCCGATGTGTACAGGATGCTGCG < 41bp 0.888287864052337 0.590093462658719 0.9095 0.379481 prediction 0.596388802787234 Functional Loss - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607053 chr5:131607056 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_54856 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr2 131976406 131976406 1 + A T LUSC 131976402 + 131976382 131976422 41 GTGGAGAAGATCTGGACAAGCTCCACAGAGCTGCCTGGTGG GTGGAGAAGATCTGGACAAGCTCCTCAGAGCTGCCTGGTGG < 41bp 0.800600299365157 0.502424601538048 0.89176023 0.099654585 prediction 0.596351395654216 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976402 chr2:131976406 nonsynonymous SNV 0.811 3 25 hm5C_associated_SNPs_54859 0 0 1 FASTKD2 POSTAR2 ENCODE chr2:131976356-131976497
64251 chr19 44681653 44681653 1 + G T SARC 44681651 + 44681631 44681671 41 CTTCACAACTACAGTCTCATCAGCGAGTTCACACTGGGGAG CTTCACAACTACAGTCTCATCATCGAGTTCACACTGGGGAG < 41bp 0.805704262084707 0.507537104727144 0.30088794 0.16939259 prediction 0.596334314715126 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681651 chr19:44681653 nonsynonymous SNV 0.980 1 23 hm5C_associated_SNPs_54863 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44681617-44681655
64251 chr17 38249335 38249335 1 + G T BLCA 38249332 + 38249312 38249352 41 GCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCACCC GCGGCAGAAGGCCGGCCGGGCGGTTCACTGGGCGTCCACCC < 41bp 0.798166693402514 0.419199671780221 0.9084925 0.87165815 prediction 0.596333386805027 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38249332 chr17:38249335 synonymous SNV . 0 24 hm5C_associated_SNPs_54864 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:38249320-38249340
64251 chr15 41191463 41191463 1 + G T STAD 41191460 + 41191440 41191480 41 GTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAG GTGGAGAGTGTGGGTTGGAACAATGCACTGGGCACGGAGAG < 41bp 0.887272613731783 0.589114631580169 0.665078 0.26160663 prediction 0.596315964303228 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191460 chr15:41191463 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_54867 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334288 chr15:41191443-41191463
64251 chr20 47711367 47711367 1 + G T LUSC 47711364 + 47711344 47711384 41 TATTGACATAGAAGATACACCAGGATATCAGACTGCCTTCT TATTGACATAGAAGATACACCAGTATATCAGACTGCCTTCT < 41bp 0.798114563795273 0.440634825449125 0.3756294 0.030946046 prediction 0.596229127590545 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47711364 chr20:47711367 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_54869 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47711275-47711445
64251 chr14 78374163 78374163 1 + G T LUAD 78374160 + 78374140 78374180 41 TCCCAGGTCCCCCGAATCCACTGGGACCTGTCCACGGAGCG TCCCAGGTCCCCCGAATCCACTGTGACCTGTCCACGGAGCG < 41bp 0.798102240971424 0.420027930631903 0.59258443 0.047825217 prediction 0.596204481942849 Functional Loss - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78374160 chr14:78374163 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_54873 0 0 1 TBRG4 POSTAR2 ENCODE chr14:78374161-78374169
64251 chr19 7592608 7592608 1 + G T LIHC 7592605 + 7592585 7592625 41 CTACTTCCCTAAGGTGGGGACAGGGCCCCCCCGCCCGCGCT CTACTTCCCTAAGGTGGGGACAGTGCCCCCCCGCCCGCGCT < 41bp 0.79808989479066 0.423367517000646 0.9038962 0.5042455 prediction 0.596179789581319 Functional Loss - MCOLN1 ENSG00000090674 intronic Human protein_coding chr19:7592605 chr19:7592608 . . 0 24 hm5C_associated_SNPs_54874 0 0 1 PRPF8 POSTAR2 ENCODE chr19:7592597-7592671
64251 chr22 44322827 44322827 1 + A T LUAD 44322823 + 44322803 44322843 41 TCCTGTCCCCAGAGCAGACTCTGCAGGTCCTCTCAGATCTT TCCTGTCCCCAGAGCAGACTCTGCTGGTCCTCTCAGATCTT < 41bp 0.798087123569516 0.488788774419485 0.2369586 0.048490703 prediction 0.596174247139033 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44322823 chr22:44322827 nonsynonymous SNV 0.011 0 25 hm5C_associated_SNPs_54875 0 0 3 PPIG POSTAR2 ENCODE chr22:44322822-44322836
64251 chr1 110173387 110173387 1 + G T SARC 110173385 + 110173365 110173405 41 ATGTGTGAGCTGGCCCGCAACAGCGTGCTCATGAGCGGCTT ATGTGTGAGCTGGCCCGCAACATCGTGCTCATGAGCGGCTT < 41bp 0.798084276090531 0.477579485977857 0.40762204 0.21167526 prediction 0.596168552181061 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110173385 chr1:110173387 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_54877 0 0 3 GRWD1 POSTAR2 ENCODE chr1:110173368-110173404
64251 chr6 44274725 44274725 1 - T A rs147091256 44274729 - 44274709 44274749 41 CTGCGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGC CTGCGTCGAGCTGTGCGTTTCTCCTTGGAGATCTTAAAGGC < 41bp 0.86102466825007 0.562948126784444 0.9747491 0.30820045 prediction 0.596153082931252 Functional Loss - AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274729 chr6:44274725 nonsynonymous SNV 0.095 0 25 hm5C_associated_SNPs_54879 2 0 3 GRWD1 POSTAR2 ENCODE chr6:44274661-44274751
64251 chr9 108210513 108210513 1 + G T UCEC 108210511 + 108210491 108210531 41 AGCCACTCGCCATGGACTCCCAGAAAGTAAGCGGGGGAGGG AGCCACTCGCCATGGACTCCCATAAAGTAAGCGGGGGAGGG < 41bp 0.835219587200022 0.537176533905766 0.4445806 0.2617356 prediction 0.596086106588512 Functional Loss - FSD1L ENSG00000106701 CDS Human protein_coding chr9:108210511 chr9:108210513 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_54882 0 0 2 PRPF8 POSTAR2 ENCODE chr9:108210481-108210560
64251 chr13 103518207 103518207 1 + G T UCEC 103518205 + 103518185 103518225 41 ACGACGTGGATGGTGAGCCACAGGAAGCTGAGAAAGATGCG ACGACGTGGATGGTGAGCCACATGAAGCTGAGAAAGATGCG < 41bp 0.840913702418558 0.542902098186016 0.4122763 0.16599521 prediction 0.596023208465084 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103518205 chr13:103518207 nonsynonymous SNV 0.761 0 23 hm5C_associated_SNPs_54884 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:103518202-103518225
64251 chr2 97017660 97017660 1 + G T UCEC 97017658 + 97017638 97017678 41 ACTCTCCACTGCCAGGACTACAGAAGTGAACTGCTGTTTCC ACTCTCCACTGCCAGGACTACATAAGTGAACTGCTGTTTCC < 41bp 0.845945232514327 0.547969925510448 0.3346539 0.12423071 prediction 0.595950614007758 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97017658 chr2:97017660 nonsynonymous SNV 0.986 1 23 hm5C_associated_SNPs_54889 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:97017626-97017667
64251 chrX 47780118 47780118 1 + A C rs781839890 47780114 + 47780094 47780134 41 ACCCCATGGAGGTAGGCTTTCTCCAGTCTTCTTCCTTGTCC ACCCCATGGAGGTAGGCTTTCTCCCGTCTTCTTCCTTGTCC < 41bp 0.871038991480064 0.573095543606457 0.94355917 0.11244455 prediction 0.595886895747214 Functional Loss - ZNF81 ENSG00000197779 UTR3 Human protein_coding chrX:47780114 chrX:47780118 . . 0 25 hm5C_associated_SNPs_54893 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47780102-47780153
64251 chr2 74173900 74173900 1 + G T UCEC 74173898 + 74173878 74173918 41 GGATATGATGTACCGGGAGCCAGCACGATGGTCCTACACAT GGATATGATGTACCGGGAGCCATCACGATGGTCCTACACAT < 41bp 0.834076520378461 0.536139822085832 0.26967478 0.102427185 prediction 0.595873396585258 Functional Loss - DGUOK ENSG00000114956 CDS Human protein_coding chr2:74173898 chr2:74173900 nonsynonymous SNV 0.970 1 23 hm5C_associated_SNPs_54894 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:74173860-74173902
64251 chr18 12325139 12325139 1 + G T ESCA 12325137 + 12325117 12325157 41 CGGAGCTGGTGGACGCAGTGCTGGACGTGGTGCGGAAGGAG CGGAGCTGGTGGACGCAGTGCTTGACGTGGTGCGGAAGGAG < 41bp 0.811984001361418 0.514052090686699 0.37628555 0.27653065 prediction 0.595863821349439 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325137 chr18:12325139 synonymous SNV . 0 23 hm5C_associated_SNPs_54895 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:12325128-12325150
64251 chr12 20806960 20806960 1 + A T ESCA 20806956 + 20806936 20806976 41 CTCCTCAGCTGGCCAACCTTCAGGAATCCTTCATCTCTCAC CTCCTCAGCTGGCCAACCTTCAGGTATCCTTCATCTCTCAC < 41bp 0.815766242395586 0.517835517080851 0.23265111 0.28025216 prediction 0.59586145062947 Functional Loss - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20806956 chr12:20806960 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_54896 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr12:20806959-20806980
64251 chr19 7965735 7965735 1 + G T GBM 7965733 + 7965713 7965753 41 GGCTCAAGAAGGCGGGGCTCCTGGTGGAAGACACGCTTTAC GGCTCAAGAAGGCGGGGCTCCTTGTGGAAGACACGCTTTAC < 41bp 0.797874267061226 0.477917516979953 0.9011513 0.6729729 prediction 0.595748534122452 Functional Loss - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7965733 chr19:7965735 synonymous SNV . 0 23 hm5C_associated_SNPs_54903 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:7965707-7965739
64251 chr16 69184516 69184516 1 + G T COAD 69184514 + 69184494 69184534 41 CTGGTCCCTGTGACATCTAACAGCAGTGAGAAGCAGTGGGT CTGGTCCCTGTGACATCTAACATCAGTGAGAAGCAGTGGGT < 41bp 0.839101762692873 0.541235370784903 0.85414207 0.21648121 prediction 0.59573278381594 Functional Loss - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184514 chr16:69184516 nonsynonymous SNV 0.978 0 23 hm5C_associated_SNPs_54905 0 0 10 CPSF3 POSTAR2 GSE37401,GSM917668 chr16:69184487-69184519
64251 chr16 21181907 21181907 1 + G T LUAD 21181905 + 21181885 21181925 41 TTACCACCCTGGCTGCTCTGCTGGGGGTCATAATATTGGAA TTACCACCCTGGCTGCTCTGCTTGGGGTCATAATATTGGAA < 41bp 0.797843699917778 0.471672338743809 0.7336258 0.22920352 prediction 0.595687399835555 Functional Loss - TMEM159 ENSG00000011638 CDS Human protein_coding chr16:21181905 chr16:21181907 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_54907 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:21181900-21181922
64251 chr6 28269880 28269880 1 + G T UCEC 28269878 + 28269858 28269898 41 GATCAAATTATTTCGAAATACAGGGTGAGGATAAGAAGCAA GATCAAATTATTTCGAAATACATGGTGAGGATAAGAAGCAA < 41bp 0.809510992570087 0.511685751822699 0.12607566 0.09455091 prediction 0.595650481494776 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28269878 chr6:28269880 nonsynonymous SNV 0.458 1 23 hm5C_associated_SNPs_54909 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:28269855-28269910
64251 chr6 1611149 1611149 1 + G T UCEC 1611146 + 1611126 1611166 41 GCAGCTACTGGACGCTGGACCCGGACTCCTACAACATGTTC GCAGCTACTGGACGCTGGACCCGTACTCCTACAACATGTTC < 41bp 0.797801075124987 0.434971358186059 0.034501195 0.028384745 prediction 0.595602150249973 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611146 chr6:1611149 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_54912 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:1611109-1611154
64251 chrX 153780395 153780395 1 + G T UCEC 153780392 + 153780372 153780412 41 AGCGCTGCCTGGAGGAGAATCAAGAGCTCCGAGGTGAGGAA AGCGCTGCCTGGAGGAGAATCAATAGCTCCGAGGTGAGGAA < 41bp 0.888765467225636 0.590966558886353 0.80610216 0.3088991 prediction 0.595597816678568 Functional Loss - IKBKG ENSG00000073009 CDS Human other chrX:153780392 chrX:153780395 stopgain 1.000 1 24 hm5C_associated_SNPs_54913 0 0 5 BUD13 POSTAR2 ENCODE chrX:153780344-153780416
64251 chr9 132623876 132623876 1 + A C LUSC 132623872 + 132623852 132623892 41 CCTGCTACATGAACGCTGCCCTGCAGGCCCTGTCCAATTGG CCTGCTACATGAACGCTGCCCTGCCGGCCCTGTCCAATTGG < 41bp 0.797789271114946 0.382225684892506 0.314486 0.11746177 prediction 0.595578542229892 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132623872 chr9:132623876 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_54916 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:132623840-132623878
64251 chr14 50360872 50360872 1 + G T UCEC 50360869 + 50360849 50360889 41 CCCACGAGATCCAGGAGAAACTGGGCCTGACCCGGATTCGG CCCACGAGATCCAGGAGAAACTGTGCCTGACCCGGATTCGG < 41bp 0.865704749194381 0.567915791108045 0.79665023 0.43087098 prediction 0.595577916172672 Functional Loss - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360869 chr14:50360872 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_54917 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:50360720-50360960
64251 chr5 140730561 140730561 1 + G T LUAD 140730559 + 140730539 140730579 41 GTGTTTAGCCAGGAGGTATACAGGGTTAGCCTCCAAGAAAA GTGTTTAGCCAGGAGGTATACATGGTTAGCCTCCAAGAAAA < 41bp 0.850687106041917 0.552918433662529 0.89521855 0.2460725 prediction 0.595537344758777 Functional Loss - PCDHGB1 ENSG00000254221 CDS Human protein_coding chr5:140730559 chr5:140730561 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_54920 0 0 1 EIF3H POSTAR2 ENCODE chr5:140730551-140730629
64251 chr2 74687615 74687615 1 + G C STAD 74687614 + 74687594 74687634 41 CACCCCCCTCCTGCCGCTATCGCCGTTTAACTGGCGACTCC CACCCCCCTCCTGCCGCTATCCCCGTTTAACTGGCGACTCC < 41bp 0.808387776119644 0.510654421276049 0.8031497 0.24436045 prediction 0.59546670968719 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687614 chr2:74687615 nonsynonymous SNV 0.979 3 22 hm5C_associated_SNPs_54925 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:74687580-74687618
64251 chr8 145160669 145160669 1 + G T LUAD 145160667 + 145160647 145160687 41 GGAGATGCCCACATCATTGGCAGGTGAGGCAGGCTGGGGGG GGAGATGCCCACATCATTGGCATGTGAGGCAGGCTGGGGGG < 41bp 0.797671474467573 0.468041215817514 0.92328167 0.53429997 prediction 0.595342948935146 Functional Loss - MAF1 ENSG00000179632 CDS Human protein_coding chr8:145160667 chr8:145160669 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_54931 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:145160619-145160669
64251 chr5 36152948 36152948 1 + G T UCEC 36152945 + 36152925 36152965 41 ACGTGGGGATGGGATTCCAGCAAGACTTCTGAACTGCTGTC ACGTGGGGATGGGATTCCAGCAATACTTCTGAACTGCTGTC < 41bp 0.87514070774848 0.577473273384983 0.6236016 0.33689776 prediction 0.595334868726994 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36152945 chr5:36152948 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_54932 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:36152872-36152983
64251 chr17 34171753 34171753 1 + G T STAD 34171750 + 34171730 34171770 41 GAGGTGGCTATGGAGGAGATCGAGGTGGCTATGGAGGAGAC GAGGTGGCTATGGAGGAGATCGATGTGGCTATGGAGGAGAC < 41bp 0.888696172250527 0.591029184647177 0.91165686 0.32587597 prediction 0.595333975206701 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171750 chr17:34171753 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_54933 0 0 42 RBPMS POSTAR2 SRX484627 chr17:34171640-34171900
64251 chr19 56888974 56888974 1 + G T UCEC 56888972 + 56888952 56888992 41 GTGATGCAGTTCACTCTGCACAGGAGAATTCATACTGGTGA GTGATGCAGTTCACTCTGCACATGAGAATTCATACTGGTGA < 41bp 0.797661900225471 0.486960154852327 0.83954954 0.1870293 prediction 0.595323800450942 Functional Loss - ZNF542P ENSG00000240225;ENSG00000267459 ncRNA_exonic Human other chr19:56888972 chr19:56888974 . . 0 23 hm5C_associated_SNPs_54935 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:56888954-56888977
64251 chr13 26927936 26927936 1 + G T LUAD 26927934 + 26927914 26927954 41 AGAAGCCAGTTCAGTTACCTCGGGGAATGGTGAAGTCACTA AGAAGCCAGTTCAGTTACCTCGTGGAATGGTGAAGTCACTA < 41bp 0.825777616216265 0.528131406637325 0.87930596 0.20495027 prediction 0.59529241915788 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26927934 chr13:26927936 synonymous SNV . 0 23 hm5C_associated_SNPs_54937 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr13:26927905-26927952
64251 chr16 2279622 2279622 1 + G C LUSC 2279621 + 2279601 2279641 41 CCCATCACTGTGGCCCACATCGTGGTGGAGGCGGCCTCTCT CCCATCACTGTGGCCCACATCCTGGTGGAGGCGGCCTCTCT < 41bp 0.797581614718194 0.496300803252348 0.90696084 0.84187186 prediction 0.595163229436388 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2279621 chr16:2279622 nonsynonymous SNV 0.991 0 22 hm5C_associated_SNPs_54942 0 0 2 BUD13 POSTAR2 ENCODE chr16:2279530-2279624
64251 chr14 75367892 75367892 1 + G T UCEC 75367889 + 75367869 75367909 41 ACCCCCCTCAGTCTGCCATCCTGGGGATGCATGGCATCTTT ACCCCCCTCAGTCTGCCATCCTGTGGATGCATGGCATCTTT < 41bp 0.887459754484214 0.589890663810388 0.90821457 0.2987368 prediction 0.595138181347653 Functional Loss - DLST ENSG00000119689 CDS Human protein_coding chr14:75367889 chr14:75367892 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54943 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:75367868-75367926
64251 chr5 99871421 99871421 1 + G T LUSC 99871419 + 99871399 99871439 41 GCTGCCACCGGGCCCTACCCCTGCCCAGCAGCCGGGCCGTG GCTGCCACCGGGCCCTACCCCTTCCCAGCAGCCGGGCCGTG < 41bp 0.797562142071035 0.469855408495795 0.14582613 0.15453807 prediction 0.595124284142071 Functional Loss - FAM174A ENSG00000174132 CDS Human protein_coding chr5:99871419 chr5:99871421 nonsynonymous SNV 0.020 1 23 hm5C_associated_SNPs_54946 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:99871410-99871448
64251 chrX 48418150 48418150 1 + G T STAD 48418148 + 48418128 48418168 41 CCTGAGGACCTGGAATTCATCCGCAGCACGGTCCTCAAGGA CCTGAGGACCTGGAATTCATCCTCAGCACGGTCCTCAAGGA < 41bp 0.830869217544397 0.533343144123699 0.25661469 0.08877909 prediction 0.595052146841396 Functional Loss - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418148 chrX:48418150 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_54950 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chrX:48418126-48418150
64251 chr10 103348228 103348228 1 + G T COAD 103348226 + 103348206 103348246 41 CGGCCCTCCGGGAAGGGCCTCAGGGCCTGGGTCGGCAGAGC CGGCCCTCCGGGAAGGGCCTCATGGCCTGGGTCGGCAGAGC < 41bp 0.797510718480332 0.46608287161909 0.9041208 0.4298042 prediction 0.595021436960664 Functional Loss - DPCD ENSG00000166171 CDS Human protein_coding chr10:103348226 chr10:103348228 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_54955 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:103348215-103348249
64251 chr17 20135631 20135631 1 + A T STAD 20135627 + 20135607 20135647 41 GCACCGTGAAGAGGAAACTGCTGGAGGAGGAGGAGAAGAAT GCACCGTGAAGAGGAAACTGCTGGTGGAGGAGGAGAAGAAT < 41bp 0.797492519912989 0.487460567755207 0.4563851 0.52422506 prediction 0.594985039825978 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135627 chr17:20135631 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_54958 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:20135622-20135639
64251 chr14 24619987 24619987 1 + G T LUAD 24619985 + 24619965 24620005 41 GGAAAAGGGACCCCCCAAGCCTGGGCCCCCACGACGCCTTA GGAAAAGGGACCCCCCAAGCCTTGGCCCCCACGACGCCTTA < 41bp 0.85156852151647 0.554098013428497 0.36728325 0.09271932 prediction 0.594941016175947 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619985 chr14:24619987 nonsynonymous SNV 0.020 0 23 hm5C_associated_SNPs_54963 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:24619969-24620007
64251 chr9 134006196 134006196 1 + G T READ 134006194 + 134006174 134006214 41 AGCAGCTGGCAGTGGGAAAACAGAATGGAACTGTGGTCCAG AGCAGCTGGCAGTGGGAAAACATAATGGAACTGTGGTCCAG < 41bp 0.79743726175214 0.487033088237673 0.28902838 0.24787381 prediction 0.59487452350428 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134006194 chr9:134006196 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_54968 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:134006176-134006212
64251 chr3 52823864 52823864 1 + A T rs61730358 52823860 + 52823840 52823880 41 GGAGGGACCAAGCTGTGCTGCGGCAGGACGGGTAACCTGCC GGAGGGACCAAGCTGTGCTGCGGCTGGACGGGTAACCTGCC < 41bp 0.798497106545107 0.501099647254415 0.5083354 0.53533095 prediction 0.594794918581384 Functional Loss - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52823860 chr3:52823864 nonsynonymous SNV 0.660 1 25 hm5C_associated_SNPs_54971 0 0 2 BUD13 POSTAR2 ENCODE chr3:52823851-52823926
64251 chr20 56140521 56140521 1 + G T LUAD 56140518 + 56140498 56140538 41 CACCCAGCAGCCAAACTGCCCAAGATCTTCCATGTCAACTG CACCCAGCAGCCAAACTGCCCAATATCTTCCATGTCAACTG < 41bp 0.797374572268024 0.415147897622228 0.3512377 0.09656611 prediction 0.594749144536047 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140518 chr20:56140521 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54972 0 0 2 GRWD1 POSTAR2 ENCODE chr20:56140519-56140620
64251 chr16 57255297 57255297 1 + G T LUAD 57255294 + 57255274 57255314 41 TCTGGCGTCATGCAGATTGGCTGGGCCACTCGAGACAGCAA TCTGGCGTCATGCAGATTGGCTGTGCCACTCGAGACAGCAA < 41bp 0.797332723733031 0.413696148206573 0.21798244 0.019906312 prediction 0.594665447466063 Functional Loss - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57255294 chr16:57255297 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_54975 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:57255282-57255308
64251 chr14 57857946 57857946 1 + G T LUSC 57857943 + 57857923 57857963 41 AGCTCAACGGATTGATTAGCCCCGAACTGCGGCACCTCCGG AGCTCAACGGATTGATTAGCCCCTAACTGCGGCACCTCCGG < 41bp 0.877158600499756 0.579837536870106 0.16062862 0.1702368 prediction 0.594642127259299 Functional Loss - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57857943 chr14:57857946 stopgain 0.998 0 24 hm5C_associated_SNPs_54979 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:57857946-57857947
64251 chr19 14574759 14574759 1 + G T LAML 14574756 + 14574736 14574776 41 CCTTTAGCCCTGGGGCTTCTCCAGGATCCGAGGCCCGGACC CCTTTAGCCCTGGGGCTTCTCCATGATCCGAGGCCCGGACC < 41bp 0.797304592326042 0.403893267634164 0.91780776 0.31636 prediction 0.594609184652085 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574756 chr19:14574759 stopgain 0.007 0 24 hm5C_associated_SNPs_54982 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14574749-14574772
64251 chr1 151039791 151039791 1 + G T UCEC 151039788 + 151039768 151039808 41 ATCTGTCGGAGCTGGAAGGCCTGGGTCTGTCAGATACAGCC ATCTGTCGGAGCTGGAAGGCCTGTGTCTGTCAGATACAGCC < 41bp 0.881568230076858 0.584269569834663 0.7220738 0.20685515 prediction 0.594597320484388 Functional Loss - MLLT11 ENSG00000213190 CDS Human protein_coding chr1:151039788 chr1:151039791 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_54984 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:151039762-151039800
64251 chr3 62307666 62307666 1 + G T UCEC 62307664 + 62307644 62307684 41 TAAATTGGGTGATCAACACACAGAAAAGGCATCTCAACTCC TAAATTGGGTGATCAACACACATAAAAGGCATCTCAACTCC < 41bp 0.797259898397121 0.495940057397924 0.32180807 0.14769426 prediction 0.594519796794242 Functional Loss - C3orf14 ENSG00000114405 CDS Human protein_coding chr3:62307664 chr3:62307666 stopgain 0.979 0 23 hm5C_associated_SNPs_54990 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:62307641-62307666
64251 chr7 1024635 1024635 1 + G C ESCA 1024634 + 1024614 1024654 41 GAGGGCTGCCCGCCAGTTCACGGTGCGTGCCCTGCACAGCC GAGGGCTGCCCGCCAGTTCACCGTGCGTGCCCTGCACAGCC < 41bp 0.797246363518335 0.49609667827655 0.919173 0.87009645 prediction 0.594492727036671 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1024634 chr7:1024635 synonymous SNV . 0 22 hm5C_associated_SNPs_54992 0 0 6 GRWD1 POSTAR2 ENCODE chr7:1024592-1024646
64251 chr11 76572075 76572075 1 + G T BRCA 76572072 + 76572052 76572092 41 GGGGCCCCACGACCTCCACGCTGGACTGGTGCGAGGAGAAC GGGGCCCCACGACCTCCACGCTGTACTGGTGCGAGGAGAAC < 41bp 0.863430498860316 0.566187782965603 0.26934108 0.17775139 prediction 0.594485431789427 Functional Loss - ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572072 chr11:76572075 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_54993 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:76572075-76572076
64251 chr1 11810281 11810281 1 + G T HNSC 11810278 + 11810258 11810298 41 ACGCTGCGCCCGGCCCTGCCCCGGGCCTTCCTCGTGCCTGG ACGCTGCGCCCGGCCCTGCCCCGTGCCTTCCTCGTGCCTGG < 41bp 0.886858316179817 0.589622946143676 0.89663655 0.2825116 prediction 0.594470740072283 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810278 chr1:11810281 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_54994 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:11810252-11810342
64251 chr15 90119402 90119402 1 + G T rs200929837 90119399 + 90119379 90119419 41 GTGATGGAGAAGTTGTTGCCCAAGAGAGTCCGGGAAGTCAT GTGATGGAGAAGTTGTTGCCCAATAGAGTCCGGGAAGTCAT < 41bp 0.797222717559733 0.432975616644197 0.46168756 0.3137976 prediction 0.594445435119467 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90119399 chr15:90119402 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_54996 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:90119396-90119418
64251 chr3 57542481 57542481 1 + G T rs200174473 57542479 + 57542459 57542499 41 TCTGCGAGCCCGTGGTGAAGCTGTACTACCGGGAAGAGGCA TCTGCGAGCCCGTGGTGAAGCTTTACTACCGGGAAGAGGCA < 41bp 0.838411827362445 0.541209314550609 0.2050479 0.064239025 prediction 0.594405025623673 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542479 chr3:57542481 synonymous SNV . 0 23 hm5C_associated_SNPs_54998 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:57542480-57542500
64251 chr6 24409715 24409715 1 + G T BRCA 24409712 + 24409692 24409732 41 GGAAGAAAACTGAATTATACCAAGAGTTAGGTCTTCAAGCC GGAAGAAAACTGAATTATACCAATAGTTAGGTCTTCAAGCC < 41bp 0.867228091637884 0.570031868750603 0.41871938 0.12695548 prediction 0.594392445774563 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24409712 chr6:24409715 stopgain 0.997 1 24 hm5C_associated_SNPs_54999 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:24409686-24409715
64251 chr16 53500990 53500990 1 + G T GBM 53500988 + 53500968 53501008 41 AGGTCATGCCACCTCAGAACCTGGAAAGGGCAGATGAAATT AGGTCATGCCACCTCAGAACCTTGAAAGGGCAGATGAAATT < 41bp 0.797188958850541 0.482472447948323 0.07374069 0.098804116 prediction 0.594377917701082 Functional Loss - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53500988 chr16:53500990 synonymous SNV . 0 23 hm5C_associated_SNPs_55000 0 0 5 PPIG POSTAR2 ENCODE chr16:53500953-53501002
64251 chr4 7026977 7026977 1 + G T UCEC 7026974 + 7026954 7026994 41 ATCCAGATGCAGAGCCGAAACAAGAAGTGGGCTCAGGTCAG ATCCAGATGCAGAGCCGAAACAATAAGTGGGCTCAGGTCAG < 41bp 0.884947575329933 0.587760633664252 0.5511798 0.29426342 prediction 0.594373883331363 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026974 chr4:7026977 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_55002 0 0 1 BUD13 POSTAR2 ENCODE chr4:7026966-7027021
64251 chr7 128587110 128587110 1 + G T GBM 128587108 + 128587088 128587128 41 GTTGCCAAGCCTGAGCCTCACAGGTGGGGCCGGGAGGTGGT GTTGCCAAGCCTGAGCCTCACATGTGGGGCCGGGAGGTGGT < 41bp 0.797183853083184 0.479244801246203 0.87256503 0.34631783 prediction 0.594367706166367 Functional Loss - IRF5 ENSG00000128604 CDS Human protein_coding chr7:128587108 chr7:128587110 stopgain 0.987 2 23 hm5C_associated_SNPs_55003 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:128587079-128587110
64251 chr9 135926223 135926223 1 + G T SARC 135926221 + 135926201 135926241 41 GAGAATCTGATTGGCCTGAGCAGAGCCCGGCGCCCCCACAA GAGAATCTGATTGGCCTGAGCATAGCCCGGCGCCCCCACAA < 41bp 0.797181204608428 0.457831727428144 0.7490083 0.07402295 prediction 0.594362409216856 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926221 chr9:135926223 nonsynonymous SNV 0.984 4 23 hm5C_associated_SNPs_55004 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:135926196-135926227
64251 chr8 145135277 145135277 1 + G T LUSC 145135274 + 145135254 145135294 41 GCTTCGTGGACGGCACAGCCCTGGCGGACCTCAGCCATGTG GCTTCGTGGACGGCACAGCCCTGTCGGACCTCAGCCATGTG < 41bp 0.797180429878462 0.421411029908942 0.27929384 0.027507663 prediction 0.594360859756924 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135274 chr8:145135277 nonsynonymous SNV 0.515 2 24 hm5C_associated_SNPs_55005 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:145135220-145135300
64251 chr5 23527462 23527462 1 + G T HNSC 23527460 + 23527440 23527480 41 ATGTCTGCAGGGAGTGTGGGCGGGGCTTTCGCGATAAGTCA ATGTCTGCAGGGAGTGTGGGCGTGGCTTTCGCGATAAGTCA < 41bp 0.79713796658081 0.450288240658988 0.9154262 0.58361006 prediction 0.594275933161621 Functional Loss - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527460 chr5:23527462 synonymous SNV . 0 23 hm5C_associated_SNPs_55009 0 0 1 LIN28B POSTAR2 ENCODE chr5:23527410-23527478
64251 chr19 55494874 55494874 1 + A T LUAD 55494870 + 55494850 55494890 41 GACATTCAACGGTGACAGACCTGCAGGAGCTCCTCGGCTGT GACATTCAACGGTGACAGACCTGCTGGAGCTCCTCGGCTGT < 41bp 0.8238503807932 0.52673284798984 0.43541062 0.46682188 prediction 0.594235065606722 Functional Loss - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494870 chr19:55494874 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_55013 0 0 1 RBM15 POSTAR2 ENCODE chr19:55494824-55494920
64251 chr12 123238274 123238274 1 + G T BLCA 123238272 + 123238252 123238292 41 GCTGCTGACATTTCTGAATCCAGCGGGGCTGACTGCAAAGG GCTGCTGACATTTCTGAATCCATCGGGGCTGACTGCAAAGG < 41bp 0.84106115469034 0.543947410497592 0.41977373 0.19476283 prediction 0.594227488385496 Functional Loss - DENR ENSG00000139726 CDS Human protein_coding chr12:123238272 chr12:123238274 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_55014 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:123238240-123238280
64251 chr16 1824320 1824320 1 + G T UCEC 1824317 + 1824297 1824337 41 TTGCTGCTGCTGCTGGAGCCCGAGGAGTTTCTGCAGGGCGT TTGCTGCTGCTGCTGGAGCCCGATGAGTTTCTGCAGGGCGT < 41bp 0.797098564032117 0.415548188509507 0.8925929 0.7456445 prediction 0.594197128064233 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1824317 chr16:1824320 nonsynonymous SNV 0.044 0 24 hm5C_associated_SNPs_55018 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:1824280-1824320
64251 chr5 6750512 6750512 1 + G T LUAD 6750509 + 6750489 6750529 41 AGCAGACGCAGAACCGAGAGCCCGAGTCTCCCTATGGCCAG AGCAGACGCAGAACCGAGAGCCCTAGTCTCCCTATGGCCAG < 41bp 0.797096897779195 0.414163964779348 0.12116581 0.06632891 prediction 0.594193795558391 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750509 chr5:6750512 stopgain 0.001 0 24 hm5C_associated_SNPs_55019 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:6750476-6750531
64251 chr7 116435746 116435746 1 + G T LUAD 116435743 + 116435723 116435763 41 GCTCCTCTGGGAGCTGATGACAAGAGGAGCCCCACCTTATC GCTCCTCTGGGAGCTGATGACAATAGGAGCCCCACCTTATC < 41bp 0.842594249492958 0.545509544454019 0.8386598 0.26880682 prediction 0.594169410077878 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116435743 chr7:116435746 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55021 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:116435741-116435764
64251 chr17 61907278 61907278 1 + G T UCEC 61907276 + 61907256 61907296 41 TCCTATGTGGGGGAAGTAGTCCGGGCCATGGATAAGAAGAA TCCTATGTGGGGGAAGTAGTCCTGGCCATGGATAAGAAGAA < 41bp 0.797079925205998 0.457213078454468 0.90476626 0.41054833 prediction 0.594159850411996 Functional Loss - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61907276 chr17:61907278 nonsynonymous SNV 0.965 3 23 hm5C_associated_SNPs_55024 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr17:61907252-61907291
64251 chr1 113638562 113638562 1 + G T UCEC 113638560 + 113638540 113638580 41 TGTATGGCTTGCGAATGTTACAGCAGCTCTATGTGAGCCAG TGTATGGCTTGCGAATGTTACATCAGCTCTATGTGAGCCAG < 41bp 0.835376466508253 0.53829876516014 0.7944559 0.17024484 prediction 0.594155402696225 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113638560 chr1:113638562 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_55025 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:113638538-113638580
64251 chr6 138726413 138726413 1 + G T UCEC 138726410 + 138726390 138726430 41 AGCTACATTCAAGGCAAAAACGAGAAAGGTAAAAGCAGTTT AGCTACATTCAAGGCAAAAACGATAAAGGTAAAAGCAGTTT < 41bp 0.879915369882211 0.582837819880215 0.25133204 0.15505785 prediction 0.594155100003994 Functional Loss - HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138726410 chr6:138726413 nonsynonymous SNV 0.939 0 24 hm5C_associated_SNPs_55026 0 0 2 UCHL5 POSTAR2 ENCODE chr6:138726265-138726420
64251 chr2 136499415 136499415 1 + A C rs111285988 136499411 + 136499391 136499431 41 ACCAGCCAAGGTTGCGGGGGCCGCAGAGCCGGACGAAGACG ACCAGCCAAGGTTGCGGGGGCCGCCGAGCCGGACGAAGACG < 41bp 0.797049866403301 0.473877711880707 0.81791794 0.6509382 prediction 0.594099732806601 Functional Loss - UBXN4 ENSG00000144224 UTR5 Human protein_coding chr2:136499411 chr2:136499415 . . 0 25 hm5C_associated_SNPs_55028 0 0 11 BUD13 POSTAR2 ENCODE chr2:136499415-136499439
64251 chr2 135922233 135922233 1 + G T rs144455066 135922230 + 135922210 135922250 41 GCAGGAAGAGGACATGCTGGCAGGATCATTCACAAGCTGTT GCAGGAAGAGGACATGCTGGCAGTATCATTCACAAGCTGTT < 41bp 0.797026401316444 0.430708890344716 0.87794036 0.36800054 prediction 0.594052802632888 Functional Loss - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135922230 chr2:135922233 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_55030 1 0 5 BUD13 POSTAR2 ENCODE chr2:135922161-135922234
64251 chr10 101451204 101451204 1 + G T BRCA 101451201 + 101451181 101451221 41 GGAGAAGGACAGTAGGGATACTGGATATGGGAGGAGCCTCT GGAGAAGGACAGTAGGGATACTGTATATGGGAGGAGCCTCT < 41bp 0.880871631122785 0.583846230218182 0.41109085 0.20896122 prediction 0.594050801809206 Functional Loss - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101451201 chr10:101451204 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_55032 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:101451200-101451219
64251 chr17 32959770 32959770 1 + A C UCEC 32959766 + 32959746 32959786 41 GTTTGTGAGTGGAAAAGAGTCTCGAGGGTCCATGAACGCCA GTTTGTGAGTGGAAAAGAGTCTCGCGGGTCCATGAACGCCA < 41bp 0.910644797157819 0.613631312098393 0.22405484 0.037611425 prediction 0.59402697011885 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32959766 chr17:32959770 synonymous SNV . 0 25 hm5C_associated_SNPs_55034 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:32959770-32959771
64251 chr20 34207164 34207164 1 + A T UCEC 34207160 + 34207140 34207180 41 ACATCCCACGATTACGCAGACAGGAACACTGCCTACTTCTG ACATCCCACGATTACGCAGACAGGTACACTGCCTACTTCTG < 41bp 0.797010914229425 0.494801193299019 0.50695837 0.37003815 prediction 0.59402182845885 Functional Loss - SPAG4 ENSG00000061656 CDS Human protein_coding chr20:34207160 chr20:34207164 nonsynonymous SNV 0.822 1 25 hm5C_associated_SNPs_55035 0 0 1 GRWD1 POSTAR2 ENCODE chr20:34207156-34207222
64251 chr7 100730765 100730765 1 + G T READ 100730762 + 100730742 100730782 41 ATGGCGGCCGCGTCCGCTGCCCCGAGTGCCGCGAGACAGTG ATGGCGGCCGCGTCCGCTGCCCCTAGTGCCGCGAGACAGTG < 41bp 0.796991615680747 0.430494816775517 0.29516602 0.21253595 prediction 0.593983231361493 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730762 chr7:100730765 stopgain 0.035 1 24 hm5C_associated_SNPs_55039 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:100730760-100730780
64251 chr3 152174130 152174130 1 + G T LUSC 152174128 + 152174108 152174148 41 TGCCACAAGTGTTCCCTTCGCTGCAACAGCCACAGCCAACC TGCCACAAGTGTTCCCTTCGCTTCAACAGCCACAGCCAACC < 41bp 0.800088270450554 0.503146870150157 0.102476 0.04851851 prediction 0.593882800600794 Functional Loss - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152174128 chr3:152174130 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55044 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:152174120-152174132
64251 chr19 6750390 6750390 1 + A T rs534886687 6750386 + 6750366 6750406 41 GCCCGGCCTCCCGACCCCCCCGCTAGCGCCCCGCCAGACAG GCCCGGCCTCCCGACCCCCCCGCTTGCGCCCCGCCAGACAG < 41bp 0.796916882238335 0.479532571139005 0.20884046 0.038030863 prediction 0.59383376447667 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750386 chr19:6750390 nonsynonymous SNV 0.018 2 25 hm5C_associated_SNPs_55047 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6750368-6750404
64251 chr16 10577294 10577294 1 + G T rs80285112 10577291 + 10577271 10577311 41 GCAGCCCAAGAAACTCTGAACGGGGCCCAATGGAGGCAAAC GCAGCCCAAGAAACTCTGAACGGTGCCCAATGGAGGCAAAC < 41bp 0.796873978083161 0.488764159203978 0.87413526 0.20130613 prediction 0.593747956166321 Functional Loss - ATF7IP2 ENSG00000166669 UTR3 Human protein_coding chr16:10577291 chr16:10577294 . . 0 24 hm5C_associated_SNPs_55052 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:10577288-10577326
64251 chr1 220298633 220298633 1 + G T UCEC 220298630 + 220298610 220298650 41 GAACAACACGGCAGTGATATCTGGTGGACTCTTCCCCCTGA GAACAACACGGCAGTGATATCTGTTGGACTCTTCCCCCTGA < 41bp 0.88190562796858 0.58503679290037 0.49223217 0.06894931 prediction 0.59373767013642 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220298630 chr1:220298633 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55054 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:220298575-220298638
64251 chr6 2900782 2900782 1 - C A UCEC 2900785 - 2900765 2900805 41 GCCTTTTAAAGATACTGTGTCAAGATAACCCTTCGCACAAC GCCTTTTAAAGATACTGTGTCAATATAACCCTTCGCACAAC < 41bp 0.796859903415368 0.424435887849296 0.50375384 0.041150004 prediction 0.593719806830737 Functional Loss - SERPINB9 ENSG00000170542 CDS Human protein_coding chr6:2900785 chr6:2900782 nonsynonymous SNV 0.167 2 24 hm5C_associated_SNPs_55055 0 0 2 FTO POSTAR2 ENCODE chr6:2900764-2900856
64251 chr19 39915897 39915897 1 + G T STAD 39915895 + 39915875 39915915 41 CAGGAATCTATGGGCCTTCACAGGGCCCAGGGGGCTCCTGA CAGGAATCTATGGGCCTTCACATGGCCCAGGGGGCTCCTGA < 41bp 0.796850522414011 0.457159667029042 0.9383207 0.54363096 prediction 0.593701044828022 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915895 chr19:39915897 nonsynonymous SNV 0.937 1 23 hm5C_associated_SNPs_55060 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:39915866-39915898
64251 chr1 161188716 161188716 1 + G T LUAD 161188713 + 161188693 161188733 41 AGACTTACGAGACTCTGAAGCATGAGAAACCACCACAGTAG AGACTTACGAGACTCTGAAGCATTAGAAACCACCACAGTAG < 41bp 0.796844743578797 0.426327553481774 0.36410785 0.10659522 prediction 0.593689487157593 Functional Loss - FCER1G ENSG00000158869 CDS Human protein_coding chr1:161188713 chr1:161188716 stopgain 0.998 0 24 hm5C_associated_SNPs_55061 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:161188692-161188736
64251 chr4 41984149 41984149 1 + G T STAD 41984146 + 41984126 41984166 41 CTCTGAAGATCCCTTCGTTCCACGTGTACGTGCTCAGAAAC CTCTGAAGATCCCTTCGTTCCACTTGTACGTGCTCAGAAAC < 41bp 0.796833121064393 0.436040282514622 0.5144447 0.25925738 prediction 0.593666242128786 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984146 chr4:41984149 nonsynonymous SNV 0.584 2 24 hm5C_associated_SNPs_55062 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:41984108-41984154
64251 chr18 8786057 8786057 1 + G T UCEC 8786054 + 8786034 8786074 41 CAGACGGGGACACCGGGAGCCACGGGCTGGGAGGCCAGACC CAGACGGGGACACCGGGAGCCACTGGCTGGGAGGCCAGACC < 41bp 0.796828373516911 0.420130822146565 0.9041811 0.5246023 prediction 0.593656747033821 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8786054 chr18:8786057 nonsynonymous SNV 0.067 2 24 hm5C_associated_SNPs_55064 0 0 1 FXR2 POSTAR2 ENCODE chr18:8785948-8786077
64251 chr11 61897873 61897873 1 + A C LUSC 61897869 + 61897849 61897889 41 CCCATCCTGCCGGATAACTTCTCCACGCCCACGGGCTCTCG CCCATCCTGCCGGATAACTTCTCCCCGCCCACGGGCTCTCG < 41bp 0.796794406233788 0.367899415242641 0.9451121 0.40266675 prediction 0.593588812467576 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897869 chr11:61897873 nonsynonymous SNV 0.004 2 25 hm5C_associated_SNPs_55069 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:61897860-61897880
64251 chr20 62658381 62658381 1 + G T LGG 62658379 + 62658359 62658399 41 GAGTGGGTGCAAGACAACATCAGGGCAGCCCAAGATCTGTG GAGTGGGTGCAAGACAACATCATGGCAGCCCAAGATCTGTG < 41bp 0.852966850865329 0.556184907362557 0.89220035 0.36688554 prediction 0.593563887005544 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62658379 chr20:62658381 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_55072 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:62658355-62658381
64251 chr12 132195838 132195838 1 + G T LUSC 132195836 + 132195816 132195856 41 AAGCGGCGCGAAGGAGGAGGCCGGGCCAGGCGGTGCCGGCG AAGCGGCGCGAAGGAGGAGGCCTGGCCAGGCGGTGCCGGCG < 41bp 0.827023194951948 0.530244143235184 0.89690846 0.63038754 prediction 0.593558103433527 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132195836 chr12:132195838 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_55074 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132195835-132195859
64251 chr1 161198843 161198843 1 + G T SARC 161198840 + 161198820 161198860 41 CTTGGAGCCTTCCTCAATCACTGGCGCAACAGATTCCATTG CTTGGAGCCTTCCTCAATCACTGTCGCAACAGATTCCATTG < 41bp 0.796777081580195 0.419571657901563 0.7887439 0.26709813 prediction 0.59355416316039 Functional Loss - TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161198840 chr1:161198843 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_55076 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:161198820-161198858
64251 chr21 37445142 37445142 1 + G T BLCA 37445139 + 37445119 37445159 41 CCCCAGATGCTGAGGGTCCCCATGGACAATTTGTTTCAGAG CCCCAGATGCTGAGGGTCCCCATTGACAATTTGTTTCAGAG < 41bp 0.796774934910127 0.465776045714976 0.18904924 0.031657696 prediction 0.593549869820253 Functional Loss - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445139 chr21:37445142 stopgain 0.757 1 24 hm5C_associated_SNPs_55077 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:37445080-37445180
64251 chr17 7185167 7185167 1 + G T rs45599134 7185164 + 7185144 7185184 41 CGGGACCCCCGCGGCCTCCGCAGGTTCTGCGCTCCAGGCCG CGGGACCCCCGCGGCCTCCGCAGTTTCTGCGCTCCAGGCCG < 41bp 0.79677380509613 0.416925797480373 0.65882456 0.25936812 prediction 0.59354761019226 Functional Loss - SLC2A4 ENSG00000181856 UTR5 Human protein_coding chr17:7185164 chr17:7185167 . . 0 24 hm5C_associated_SNPs_55078 0 0 2 DDX3X POSTAR2 ENCODE chr17:7184999-7185190
64251 chr10 70730090 70730090 1 + A T LIHC 70730086 + 70730066 70730106 41 AAGAAGCCCAGGAGCTGTCCCAGAATTCAGCTATAAAGCAG AAGAAGCCCAGGAGCTGTCCCAGATTTCAGCTATAAAGCAG < 41bp 0.798206554976264 0.501439455086352 0.24504018 0.18984568 prediction 0.593534199779824 Functional Loss - DDX21 ENSG00000165732 CDS Human protein_coding chr10:70730086 chr10:70730090 nonsynonymous SNV 0.561 2 25 hm5C_associated_SNPs_55079 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70730023-70730101
64251 chr6 28331591 28331591 1 + G T LUSC 28331589 + 28331569 28331609 41 ACCATGGCAGCCTGGTCTCCCTGGGTAAGACTAAAGGACAC ACCATGGCAGCCTGGTCTCCCTTGGTAAGACTAAAGGACAC < 41bp 0.824038616223944 0.527272198098813 0.63489926 0.13210258 prediction 0.593532836250262 Functional Loss - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28331589 chr6:28331591 synonymous SNV . 0 23 hm5C_associated_SNPs_55080 0 0 2 KHSRP POSTAR2 ENCODE chr6:28331564-28331689
64251 chr20 30385296 30385296 1 + G T UCEC 30385293 + 30385273 30385313 41 TCTCAGGAGCCCTTTGTTCCCAAGAAAGAGAAGAAATCAGT TCTCAGGAGCCCTTTGTTCCCAATAAAGAGAAGAAATCAGT < 41bp 0.796758940320343 0.435298936695932 0.37652326 0.21233961 prediction 0.593517880640686 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30385293 chr20:30385296 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_55082 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:30385268-30385296
64251 chrX 21874981 21874981 1 + G T LUSC 21874979 + 21874959 21874999 41 CCTGGCCTCTCTGTCGGCCTCGGCGGCATCAACATCAACAT CCTGGCCTCTCTGTCGGCCTCGTCGGCATCAACATCAACAT < 41bp 0.796754434410685 0.464334550523912 0.84209764 0.06850934 prediction 0.593508868821371 Functional Loss - YY2 ENSG00000230797 CDS Human protein_coding chrX:21874979 chrX:21874981 nonsynonymous SNV 0.038 0 23 hm5C_associated_SNPs_55083 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:21874975-21875006
64251 chr8 144462836 144462836 1 + G T CESC 144462833 + 144462813 144462853 41 ACGCCCTGTGCCGCGTCCTGCGCGAGGTGGACCTGCTTCGG ACGCCCTGTGCCGCGTCCTGCGCTAGGTGGACCTGCTTCGG < 41bp 0.883792373643246 0.587064406504245 0.65282214 0.28445506 prediction 0.593455934278001 Functional Loss - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144462833 chr8:144462836 stopgain 0.013 0 24 hm5C_associated_SNPs_55087 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr8:144462817-144462838
64251 chr16 30081487 30081487 1 + G T LUAD 30081484 + 30081464 30081504 41 GTACACTCCGAGCGGTCAGGCTGGGGCTGCTGCCAGCGAGT GTACACTCCGAGCGGTCAGGCTGTGGCTGCTGCCAGCGAGT < 41bp 0.796723265948752 0.411965844130464 0.9250828 0.37969238 prediction 0.593446531897504 Functional Loss - ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081484 chr16:30081487 nonsynonymous SNV 0.725 3 24 hm5C_associated_SNPs_55089 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:30081440-30081500
64251 chr15 91017820 91017820 1 + G T BLCA 91017818 + 91017798 91017838 41 AGCTTGACCTTATGAAGATGCGGGAAGAGGTTATCACCCTC AGCTTGACCTTATGAAGATGCGTGAAGAGGTTATCACCCTC < 41bp 0.815177451532513 0.518455204821722 0.887709 0.1590231 prediction 0.593444493421583 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91017818 chr15:91017820 synonymous SNV . 0 23 hm5C_associated_SNPs_55090 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91017777-91017823
64251 chr1 246810648 246810648 1 + G T LUAD 246810645 + 246810625 246810665 41 CACCCAGTCCTCCGAGACAGCAGGGAGCCCGTCTGGGCCAG CACCCAGTCCTCCGAGACAGCAGTGAGCCCGTCTGGGCCAG < 41bp 0.89680282875018 0.600086176981467 0.8949557 0.15251714 prediction 0.593433303537426 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810645 chr1:246810648 nonsynonymous SNV 0.424 2 24 hm5C_associated_SNPs_55093 0 0 2 FMR1 POSTAR2 ENCODE chr1:246810631-246810676
64251 chr20 30137135 30137135 1 + G T LIHC 30137132 + 30137112 30137152 41 CTCTTCATCTACGATGTCTTCTGGGTGAGTCAGGCAGGGAT CTCTTCATCTACGATGTCTTCTGTGTGAGTCAGGCAGGGAT < 41bp 0.796716246642703 0.427431440426392 0.6508723 0.2360028 prediction 0.593432493285406 Functional Loss - HM13 ENSG00000101294 CDS Human protein_coding chr20:30137132 chr20:30137135 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_55094 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30137099-30137136
64251 chr15 40993342 40993342 1 + A T KIRC 40993338 + 40993318 40993358 41 TGTGGAGGCTGTTGCCTATGCGCCAAAGAAGGAGCTAATAA TGTGGAGGCTGTTGCCTATGCGCCTAAGAAGGAGCTAATAA < 41bp 0.844968417967326 0.548271998248341 0.070497274 0.03680575 prediction 0.59339283943797 Functional Loss - RAD51 ENSG00000051180 CDS Human protein_coding chr15:40993338 chr15:40993342 synonymous SNV . 0 25 hm5C_associated_SNPs_55099 0 0 2 GRWD1 POSTAR2 ENCODE chr15:40993265-40993373
64251 chr12 56118161 56118161 1 + G T STAD 56118158 + 56118138 56118178 41 ATCTGTGACCCGGACCTAACCAAGGTGAGCCGATGCCTGGA ATCTGTGACCCGGACCTAACCAATGTGAGCCGATGCCTGGA < 41bp 0.884800613561074 0.588161628813968 0.909595 0.34288025 prediction 0.593277969494211 Functional Loss - RDH5 ENSG00000135437 CDS Human protein_coding chr12:56118158 chr12:56118161 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_55108 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:56118062-56118169
64251 chr19 50549303 50549303 1 + A T STAD 50549299 + 50549279 50549319 41 GGCTCAACCCTGAAGTGCCACGAGAGTGTTCACGCCAGAGA GGCTCAACCCTGAAGTGCCACGAGTGTGTTCACGCCAGAGA < 41bp 0.796620408686918 0.494579134802546 0.5510061 0.32227582 prediction 0.593240817373835 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549299 chr19:50549303 nonsynonymous SNV 0.654 2 25 hm5C_associated_SNPs_55110 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50549301-50549319
64251 chr19 50304824 50304824 1 + G T LUSC 50304822 + 50304802 50304842 41 GCAATGCTGACGTGGAGCTGCAGCAGCGAGCCGTGGAGTAC GCAATGCTGACGTGGAGCTGCATCAGCGAGCCGTGGAGTAC < 41bp 0.833055486186202 0.536435086697961 0.4018118 0.30865985 prediction 0.59324079897648 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50304822 chr19:50304824 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55111 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50304805-50304837
64251 chr2 202899509 202899509 1 + G T LUSC 202899506 + 202899486 202899526 41 AGGGCATCTCCGTGCCGGACCACGGCTTCTGCCAGCCCATC AGGGCATCTCCGTGCCGGACCACTGCTTCTGCCAGCCCATC < 41bp 0.796582750697864 0.425152552032253 0.28759515 0.1032674 prediction 0.593165501395728 Functional Loss - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899506 chr2:202899509 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55116 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:202899489-202899534
64251 chr17 80680735 80680735 1 + G T TGCT 80680732 + 80680712 80680752 41 GTGGCCCGGTTTGGATTTGACGTGGTGACGTGCTGTGGATA GTGGCCCGGTTTGGATTTGACGTTGTGACGTGCTGTGGATA < 41bp 0.796546956173002 0.404341767824769 0.89200103 0.2946449 prediction 0.593093912346003 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680732 chr17:80680735 synonymous SNV . 0 24 hm5C_associated_SNPs_55121 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80680700-80680736
64251 chr7 65552335 65552335 1 + G T ESCA 65552332 + 65552312 65552352 41 TCCCTGCAGTGGGGCCATTGCAGGCAATCCCCTGGGTGTGG TCCCTGCAGTGGGGCCATTGCAGTCAATCCCCTGGGTGTGG < 41bp 0.796524798417457 0.402280599416399 0.88487035 0.45665887 prediction 0.593049596834913 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65552332 chr7:65552335 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_55123 0 0 6 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr7:65552320-65552340
64251 chr3 195426276 195426276 1 + A C UCEC 195426272 + 195426252 195426292 41 TTGGGTGGAGAAAGAGTCCCCTAGATAAGTTATTAGGTGGG TTGGGTGGAGAAAGAGTCCCCTAGCTAAGTTATTAGGTGGG < 41bp 0.796519061320197 0.479505412225561 0.6298653 0.26500794 prediction 0.593038122640394 Functional Loss - MIR570 ENSG00000207650 ncRNA_exonic Human miRNA chr3:195426272 chr3:195426276 . . 0 25 hm5C_associated_SNPs_55124 0 0 1 LSM11 POSTAR2 ENCODE chr3:195426230-195426308
64251 chr19 36250297 36250297 1 + G T GBM 36250294 + 36250274 36250314 41 GCCTGCCAGTTTTCTCCATTCAAGATAGTCCCTTTGGAGAT GCCTGCCAGTTTTCTCCATTCAATATAGTCCCTTTGGAGAT < 41bp 0.887852076182829 0.591366450333614 0.3070686 0.0127770305 prediction 0.592971251698429 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36250294 chr19:36250297 nonsynonymous SNV 0.257 2 24 hm5C_associated_SNPs_55132 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:36250280-36250320
64251 chr2 75107439 75107439 1 + G T HNSC 75107437 + 75107417 75107457 41 GTGCGGCGGCTGGTGCCCGGCTGCGATGTCCGCTTCCTCCG GTGCGGCGGCTGGTGCCCGGCTTCGATGTCCGCTTCCTCCG < 41bp 0.796452742393392 0.459092164459102 0.104160905 0.116747975 prediction 0.592905484786785 Functional Loss - HK2 ENSG00000159399 CDS Human protein_coding chr2:75107437 chr2:75107439 nonsynonymous SNV 0.286 5 23 hm5C_associated_SNPs_55137 0 0 9 FMR1 POSTAR2 ENCODE chr2:75107409-75107465
64251 chr8 73939210 73939210 1 + A T CESC 73939206 + 73939186 73939226 41 AGTAGTAGAAAGCAAAAGGACAAGAACAATAACTTCTCAAG AGTAGTAGAAAGCAAAAGGACAAGTACAATAACTTCTCAAG < 41bp 0.796426596190964 0.499665179477358 0.20020571 0.28844765 prediction 0.592853192381927 Functional Loss - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73939206 chr8:73939210 nonsynonymous SNV 0.084 2 25 hm5C_associated_SNPs_55142 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:73939171-73939222
64251 chr8 90914865 90914865 1 + A C rs2697670 90914861 + 90914841 90914881 41 TCTGGAGGCGGACTCCGGCGCCACAGAGCCGGGGCAGCCGC TCTGGAGGCGGACTCCGGCGCCACCGAGCCGGGGCAGCCGC < 41bp 0.841687773769534 0.545266163124984 0.13934529 0.10819164 prediction 0.592843221289101 Functional Loss - OSGIN2 ENSG00000164823 UTR5 Human protein_coding chr8:90914861 chr8:90914865 . . 0 25 hm5C_associated_SNPs_55144 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:90914837-90914866
64251 chr11 118451973 118451973 1 + G T rs138863361 118451971 + 118451951 118451991 41 TTCCTGGCAGGTGCTGTTGGCAGCAGCGGTCTGCACAAAAG TTCCTGGCAGGTGCTGTTGGCATCAGCGGTCTGCACAAAAG < 41bp 0.796412687308541 0.481237233318765 0.8101628 0.27111736 prediction 0.592825374617081 Functional Loss - ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118451971 chr11:118451973 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_55146 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:118451960-118451980
64251 chr10 70958268 70958268 1 + G T LUSC 70958266 + 70958246 70958286 41 TGAGTCGGCAGATTGAAATTCGGGGATTAGAATCAGCTGTT TGAGTCGGCAGATTGAAATTCGTGGATTAGAATCAGCTGTT < 41bp 0.822277418799655 0.525869413238919 0.90554947 0.7055788 prediction 0.592816011121473 Functional Loss - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70958266 chr10:70958268 synonymous SNV . 0 23 hm5C_associated_SNPs_55148 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:70958075-70958288
64251 chr1 236907947 236907947 1 + A T LUAD 236907943 + 236907923 236907963 41 CAGGCAAAGAGCAGATCTTGCTGCAGAAGGATTACGAGTCG CAGGCAAAGAGCAGATCTTGCTGCTGAAGGATTACGAGTCG < 41bp 0.821723785557511 0.525322757806263 0.3435554 0.11653361 prediction 0.592802055502496 Functional Loss - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236907943 chr1:236907947 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_55149 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:236907929-236907973
64251 chr1 171759642 171759642 1 + G T LUAD 171759640 + 171759620 171759660 41 GAAGCAGCGGCCTGCTGATGCGGAGGACCTCCCTGCAGCCC GAAGCAGCGGCCTGCTGATGCGTAGGACCTCCCTGCAGCCC < 41bp 0.854805222062644 0.558419517035534 0.92189604 0.1988835 prediction 0.592771410054219 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171759640 chr1:171759642 stopgain 0.167 0 23 hm5C_associated_SNPs_55154 0 0 1 BUD13 POSTAR2 ENCODE chr1:171759553-171759643
64251 chr10 18948604 18948604 1 + G T LUAD 18948602 + 18948582 18948622 41 GCCAAACTGTGGAGCCTCTTCTGTAACCAAGGTGAGAAGAA GCCAAACTGTGGAGCCTCTTCTTTAACCAAGGTGAGAAGAA < 41bp 0.802262448378272 0.505883943358515 0.16265014 0.101680696 prediction 0.592757010039513 Functional Loss - ARL5B ENSG00000165997 CDS Human protein_coding chr10:18948602 chr10:18948604 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55156 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:18948562-18948606
64251 chr17 71244702 71244702 1 + G T rs12885 71244699 + 71244679 71244719 41 CAAGGTGCATACAAATGCAGCGTGAGAATCCATACACGTAA CAAGGTGCATACAAATGCAGCGTTAGAATCCATACACGTAA < 41bp 0.79637004158352 0.482797372318971 0.010191053 0.009860784 prediction 0.592740083167041 Functional Loss - C17orf80 ENSG00000141219 UTR3 Human protein_coding chr17:71244699 chr17:71244702 . . 0 24 hm5C_associated_SNPs_55159 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:71244685-71244748
64251 chrX 47106510 47106510 1 + G T OV 47106507 + 47106487 47106527 41 AAGCAGCACCAGCTGGCAACCAAGAAGCTGGACCTGTGGAT AAGCAGCACCAGCTGGCAACCAATAAGCTGGACCTGTGGAT < 41bp 0.796366121554171 0.414753024678945 0.37163037 0.23191687 prediction 0.592732243108341 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47106507 chrX:47106510 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55160 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:47106500-47106520
64251 chr19 52817472 52817472 1 + G T TGCT 52817470 + 52817450 52817490 41 GGAGTGGAAATGCCTGGACCCTGCACAGAGGGCTTTATACA GGAGTGGAAATGCCTGGACCCTTCACAGAGGGCTTTATACA < 41bp 0.808768730966321 0.512440218250127 0.02590105 0.008495092 prediction 0.592657025432389 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52817470 chr19:52817472 nonsynonymous SNV 0.055 0 23 hm5C_associated_SNPs_55163 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52817466-52817492
64251 chr4 159092463 159092463 1 - C G BLCA 159092464 - 159092444 159092484 41 TCTGCTCCCTGTGCGTCCCGCGGGTGCGTAAGCTCTGGAGC TCTGCTCCCTGTGCGTCCCGCCGGTGCGTAAGCTCTGGAGC < 41bp 0.797839560466094 0.501522254712059 0.91311383 0.6881593 prediction 0.592634611508069 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092464 chr4:159092463 nonsynonymous SNV 0.012 3 22 hm5C_associated_SNPs_55167 0 0 3 DDX3X POSTAR2 ENCODE chr4:159092412-159092474
64251 chr9 115167992 115167992 1 + G T UCEC 115167989 + 115167969 115168009 41 GCTGCAGTGGAGAAAGCCATCAAGAAATTTGGAGGTAATAC GCTGCAGTGGAGAAAGCCATCAATAAATTTGGAGGTAATAC < 41bp 0.796309677409813 0.439699067920898 0.8896698 0.74998176 prediction 0.592619354819625 Functional Loss - HSDL2 ENSG00000119471 CDS Human protein_coding chr9:115167989 chr9:115167992 nonsynonymous SNV 0.673 1 24 hm5C_associated_SNPs_55168 0 0 2 PRPF8 POSTAR2 ENCODE chr9:115167964-115168032
64251 chr10 47087238 47087238 1 + G T UCEC 47087236 + 47087216 47087256 41 AACCCAACAGGCTGGAAGCCCAGCATCTCACAGGCCTACCT AACCCAACAGGCTGGAAGCCCATCATCTCACAGGCCTACCT < 41bp 0.851569131183607 0.555281904928964 0.33207357 0.18121243 prediction 0.592574452509284 Functional Loss - NPY4R;NPY4R2 ENSG00000204174 CDS Human protein_coding chr10:47087236 chr10:47087238 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_55175 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr10:47087221-47087242
64251 chr19 52091226 52091226 1 + A T GBM 52091222 + 52091202 52091242 41 TTCAACCAGAAGTCAATACTCAGCATGCATCAGAGAATTCA TTCAACCAGAAGTCAATACTCAGCTTGCATCAGAGAATTCA < 41bp 0.799333595782425 0.50306016865705 0.31666213 0.312792 prediction 0.59254685425075 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52091222 chr19:52091226 nonsynonymous SNV 0.937 0 25 hm5C_associated_SNPs_55177 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:52091220-52091244
64251 chr15 68378931 68378931 1 + A C rs199719363 68378927 + 68378907 68378947 41 ACTCACTTACGATGGTCACCCTGCATCATCGCCATTACTCC ACTCACTTACGATGGTCACCCTGCCTCATCGCCATTACTCC < 41bp 0.796273033668147 0.384066277932773 0.070019186 0.062565535 prediction 0.592546067336293 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68378927 chr15:68378931 synonymous SNV . 0 25 hm5C_associated_SNPs_55178 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:68378878-68378964
64251 chr19 16337312 16337312 1 + G T SARC 16337309 + 16337289 16337329 41 GTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTCAA GTCTTCCTCTCGGGCATGCCCGATCTGCGCCTGGGCCTCAA < 41bp 0.796266483713069 0.408445728322895 0.8829117 0.20835835 prediction 0.592532967426138 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16337309 chr19:16337312 nonsynonymous SNV 0.806 1 24 hm5C_associated_SNPs_55179 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:16337306-16337331
64251 chr22 37964338 37964338 1 + A C SARC 37964334 + 37964314 37964354 41 AGCTGAGACTCCAGCCCCCGCTGCAAACCCCCCAGCCCCTA AGCTGAGACTCCAGCCCCCGCTGCCAACCCCCCAGCCCCTA < 41bp 0.796251375603829 0.399756965305671 0.06440535 0.062267214 prediction 0.592502751207657 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964334 chr22:37964338 synonymous SNV . 0 25 hm5C_associated_SNPs_55182 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37964320-37964400
64251 chr4 30724525 30724525 1 + A T UCEC 30724521 + 30724501 30724541 41 TCTTGCACACCTCGACCCCTCTGGACTATGAGGCCACCCGG TCTTGCACACCTCGACCCCTCTGGTCTATGAGGCCACCCGG < 41bp 0.797805058136681 0.501565184158621 0.8098027 0.24507543 prediction 0.592479747956119 Functional Loss - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724521 chr4:30724525 nonsynonymous SNV 0.987 3 25 hm5C_associated_SNPs_55184 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:30724473-30724525
64251 chr16 29675891 29675891 1 + A C HNSC 29675887 + 29675867 29675907 41 TGCTCCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGGG TGCTCCTGCTGTGGCGCCGGCGGCCGAAGCGGCGGACTGGG < 41bp 0.894319791506773 0.598090559801853 0.9137169 0.8987763 prediction 0.59245846340984 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675887 chr16:29675891 nonsynonymous SNV 0.956 3 25 hm5C_associated_SNPs_55185 0 0 7 RBM15 POSTAR2 ENCODE chr16:29675829-29675893
64251 chr8 21859658 21859658 1 + G T COAD 21859655 + 21859635 21859675 41 GCACAGGCTGCTGCTCCTGCCTGGACCACATTGTGACATAC GCACAGGCTGCTGCTCCTGCCTGTACCACATTGTGACATAC < 41bp 0.796220197619448 0.427241152438697 0.32083708 0.055404514 prediction 0.592440395238895 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859655 chr8:21859658 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_55189 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:21859622-21859663
64251 chr22 38051493 38051493 1 + G T rs117382629 38051491 + 38051471 38051511 41 AGCCTGCCCGGCGCCAAAGCCGGCGTTCACCAGCCTCCCCC AGCCTGCCCGGCGCCAAAGCCGTCGTTCACCAGCCTCCCCC < 41bp 0.840111564141017 0.54389395752425 0.9209063 0.2593035 prediction 0.592435213233534 Functional Loss - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38051491 chr22:38051493 synonymous SNV . 0 23 hm5C_associated_SNPs_55190 0 0 2 DDX59 POSTAR2 ENCODE chr22:38051489-38051536
64251 chr1 45223725 45223725 1 + G T LUAD 45223723 + 45223703 45223743 41 CAAAGTTCTCTCCCTCAGCCCGGGACGTCTTCCTCCTGAAG CAAAGTTCTCTCCCTCAGCCCGTGACGTCTTCCTCCTGAAG < 41bp 0.796214024861581 0.469513339187829 0.5807423 0.09884444 prediction 0.592428049723162 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45223723 chr1:45223725 synonymous SNV . 0 23 hm5C_associated_SNPs_55193 0 0 7 EFTUD2 POSTAR2 ENCODE chr1:45223712-45223745
64251 chr12 20522878 20522878 1 + G T rs61729386 20522875 + 20522855 20522895 41 CTCATGATCGCCTTGACTAGCGCGGTCAGGACCGTGTCCCT CTCATGATCGCCTTGACTAGCGCTGTCAGGACCGTGTCCCT < 41bp 0.796169182421247 0.432409305222131 0.902875 0.18523362 prediction 0.592338364842495 Functional Loss - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20522875 chr12:20522878 synonymous SNV . 0 24 hm5C_associated_SNPs_55198 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr12:20522865-20522886
64251 chr4 56277897 56277897 1 + A C UCEC 56277893 + 56277873 56277913 41 CATATCAGTTATTATTGTATCTGAATTGGGTGATAAGACAT CATATCAGTTATTATTGTATCTGACTTGGGTGATAAGACAT < 41bp 0.796152917156228 0.39896081070807 0.16881257 0.16282633 prediction 0.592305834312455 Functional Loss - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56277893 chr4:56277897 nonsynonymous SNV 0.982 5 25 hm5C_associated_SNPs_55200 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:56277840-56277911
64251 chr11 126126653 126126653 1 + G T OV 126126650 + 126126630 126126670 41 CTTCGAGAAAACATGCTGGACAAGGGGATTAAAGTCATCTC CTTCGAGAAAACATGCTGGACAATGGGATTAAAGTCATCTC < 41bp 0.796139699756102 0.429217621020174 0.21927655 0.056949914 prediction 0.592279399512203 Functional Loss - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126126650 chr11:126126653 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_55202 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:126126640-126126668
64251 chr5 140595913 140595913 1 + A C UCEC 140595909 + 140595889 140595929 41 CTTCCAGGGCATCTTGTGGACATGAGCGGCACCAGGACCCT CTTCCAGGGCATCTTGTGGACATGCGCGGCACCAGGACCCT < 41bp 0.796077615388918 0.436405750383496 0.56101954 0.3266015 prediction 0.592155230777837 Functional Loss - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595909 chr5:140595913 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_55213 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140595884-140595935
64251 chr7 100470331 100470331 1 + G T LUAD 100470328 + 100470308 100470348 41 AGACTGTGAGAATTGTTGCTCTGGATCGAAGTTTTCACATT AGACTGTGAGAATTGTTGCTCTGTATCGAAGTTTTCACATT < 41bp 0.882473044309507 0.58641386935502 0.09153253 0.021076143 prediction 0.592118349908975 Functional Loss - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470328 chr7:100470331 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_55217 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:100470275-100470388
64251 chr3 52833906 52833906 1 + G T UCEC 52833903 + 52833883 52833923 41 CCCGAGAACCTCCAGGAGGCCAGGACGTTTGTGAAGAGCAT CCCGAGAACCTCCAGGAGGCCAGTACGTTTGTGAAGAGCAT < 41bp 0.796048602607374 0.411354627286557 0.3591675 0.19123802 prediction 0.592097205214747 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52833903 chr3:52833906 nonsynonymous SNV 0.651 1 24 hm5C_associated_SNPs_55219 0 0 4 BUD13 POSTAR2 ENCODE chr3:52833902-52833935
64251 chr2 172398126 172398126 1 + G T UCEC 172398123 + 172398103 172398143 41 GTCTACAGACTGCCGTGGACCTGGAAATGCAGCAAGCTCCT GTCTACAGACTGCCGTGGACCTGTAAATGCAGCAAGCTCCT < 41bp 0.877277520967947 0.581243184823333 0.12218717 0.044598788 prediction 0.592068672289227 Functional Loss - CYBRD1 ENSG00000071967 CDS Human protein_coding chr2:172398123 chr2:172398126 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55221 0 0 3 LSM11 POSTAR2 ENCODE chr2:172398064-172398134
64251 chr1 3386008 3386008 1 + G T LUSC 3386005 + 3385985 3386025 41 CCCTCTCCACAGGCCATGTTCGAGATCCTCACGTCGGAGTT CCCTCTCCACAGGCCATGTTCGATATCCTCACGTCGGAGTT < 41bp 0.891673352353474 0.595652514995083 0.57435364 0.07750887 prediction 0.592041674716781 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3386005 chr1:3386008 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55223 0 0 1 BUD13 POSTAR2 ENCODE chr1:3386000-3386016
64251 chrX 100402971 100402971 1 + G T GBM 100402968 + 100402948 100402988 41 ATTTCAGCAGCAAGACTTATCAAGAATTTAATCACTATTTG ATTTCAGCAGCAAGACTTATCAATAATTTAATCACTATTTG < 41bp 0.795997860926047 0.438733256242407 0.2580189 0.10686809 prediction 0.591995721852095 Functional Loss - CENPI ENSG00000102384 CDS Human protein_coding chrX:100402968 chrX:100402971 stopgain 0.648 1 24 hm5C_associated_SNPs_55226 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:100402943-100402979
64251 chr8 6302292 6302292 1 + G T PAAD 6302290 + 6302270 6302310 41 CTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAAGAG CTTTTGATACATTCAAGACCCATGAGTTCCTCAGTAAAGAG < 41bp 0.795980492177486 0.496585988725837 0.3636593 0.08070442 prediction 0.591960984354972 Functional Loss - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6302290 chr8:6302292 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_55232 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:6302275-6302303
64251 chr10 99519472 99519472 1 + G T rs146227758 99519470 + 99519450 99519490 41 TGGGAAAAGAGGTTTTTCTCCTGCAGGGTACTGGGCCAGGC TGGGAAAAGAGGTTTTTCTCCTTCAGGGTACTGGGCCAGGC < 41bp 0.804855592537096 0.508887869840888 0.3004163 0.3197959 prediction 0.591935445392416 Functional Loss - ZFYVE27 ENSG00000155256 UTR3 Human protein_coding chr10:99519470 chr10:99519472 . . 0 23 hm5C_associated_SNPs_55235 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:99519456-99519478
64251 chr17 37815776 37815776 1 + G T LUAD 37815774 + 37815754 37815794 41 TGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTT TGGTGGACCAGATCTTGGCCCATGAAGAGAACTGGAAGTTT < 41bp 0.795946837634586 0.473243787349356 0.16987467 0.07682094 prediction 0.591893675269173 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815774 chr17:37815776 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55236 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221663 chr17:37815760-37815780
64251 chr8 145748071 145748071 1 + G T UCEC 145748069 + 145748049 145748089 41 TCCAAGTAGTCGTTGACGAACAGCGCTCCCTCCCCCGGAGG TCCAAGTAGTCGTTGACGAACATCGCTCCCTCCCCCGGAGG < 41bp 0.830033126819477 0.534110791583136 0.8463266 0.46849138 prediction 0.591844670472682 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145748069 chr8:145748071 nonsynonymous SNV 0.040 3 23 hm5C_associated_SNPs_55239 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145748054-145748084
64251 chr19 19606951 19606951 1 + G T LUAD 19606948 + 19606928 19606968 41 CGGTGCCCAGTGTGCAGATTCAGGGACAGAGGATCATCCAG CGGTGCCCAGTGTGCAGATTCAGTGACAGAGGATCATCCAG < 41bp 0.894282669075949 0.598385706646704 0.9218401 0.32823882 prediction 0.59179392485849 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19606948 chr19:19606951 stopgain 1.000 1 24 hm5C_associated_SNPs_55242 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:19606927-19607004
64251 chr1 17296381 17296381 1 + G T LUAD 17296379 + 17296359 17296399 41 TGCGAGGCGAGGTGGCTGACCTGGAACTGCAGCGGGTGGAG TGCGAGGCGAGGTGGCTGACCTTGAACTGCAGCGGGTGGAG < 41bp 0.826354387882399 0.530472063567519 0.7826107 0.37336338 prediction 0.591764648629759 Functional Loss - CROCC ENSG00000058453 CDS Human protein_coding chr1:17296379 chr1:17296381 synonymous SNV . 0 23 hm5C_associated_SNPs_55244 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:17296369-17296396
64251 chr11 76823691 76823691 1 + G T UCEC 76823688 + 76823668 76823708 41 CCCGAAAAGCCCAACGCCTACGCGGGCATCTTCCACTTCCA CCCGAAAAGCCCAACGCCTACGCTGGCATCTTCCACTTCCA < 41bp 0.795865266723236 0.403675703557849 0.13557354 0.01825279 prediction 0.591730533446472 Functional Loss - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76823688 chr11:76823691 synonymous SNV . 0 24 hm5C_associated_SNPs_55246 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:76823683-76823714
64251 chr16 1545454 1545454 1 + G T rs557890967 1545452 + 1545432 1545472 41 TGTCGGCAGCAGACGCAGCCCGGCTTCATCCTGCTCCGGGA TGTCGGCAGCAGACGCAGCCCGTCTTCATCCTGCTCCGGGA < 41bp 0.795864577774757 0.465276259249376 0.27506095 0.029545724 prediction 0.591729155549515 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545452 chr16:1545454 nonsynonymous SNV 0.014 1 23 hm5C_associated_SNPs_55247 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:1545453-1545454
64251 chr20 62659905 62659905 1 + A C UCEC 62659901 + 62659881 62659921 41 ATACACTCATGGCCAAGGCGCTGCAGGAGTGCCCCAACTCC ATACACTCATGGCCAAGGCGCTGCCGGAGTGCCCCAACTCC < 41bp 0.79586316429105 0.38259241340628 0.28391805 0.17310527 prediction 0.5917263285821 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62659901 chr20:62659905 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_55248 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:62659884-62659922
64251 chr19 52090076 52090076 1 + G T UCEC 52090073 + 52090053 52090093 41 AGTCACAGTGCTTTCTTCAACAAGAAAACATTGAACACAGA AGTCACAGTGCTTTCTTCAACAATAAAACATTGAACACAGA < 41bp 0.795850302060904 0.447085924452975 0.15574455 0.11398491 prediction 0.591700604121807 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090073 chr19:52090076 nonsynonymous SNV 0.901 0 24 hm5C_associated_SNPs_55249 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:52090076-52090106
64251 chr17 33318029 33318029 1 + G T UCEC 33318027 + 33318007 33318047 41 AACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACTGTTT AACAGTGAAGCTGCTGCTGCCATGAGTCATTAAGACTGTTT < 41bp 0.837796169484143 0.54198842911457 0.8724345 0.08696598 prediction 0.591615480739147 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33318027 chr17:33318029 stopgain 0.994 1 23 hm5C_associated_SNPs_55254 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:33318004-33318073
64251 chr2 30454501 30454501 1 + A C rs560741619 30454497 + 30454477 30454517 41 GGACGGCGAGCGCCCGGTGTCCGCACTCGGCCGCCTGCCGT GGACGGCGAGCGCCCGGTGTCCGCCCTCGGCCGCCTGCCGT < 41bp 0.863697854196821 0.567908342351455 0.26494765 0.10146505 prediction 0.591579023690733 Functional Loss - LBH ENSG00000213626 UTR5 Human protein_coding chr2:30454497 chr2:30454501 . . 0 25 hm5C_associated_SNPs_55258 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr2:30454499-30454526
64251 chrX 49105132 49105132 1 + G T LIHC 49105130 + 49105110 49105150 41 GGCTGGCAGAGATCCAAGAACTGCACCAGAGTGTCCGGGCG GGCTGGCAGAGATCCAAGAACTTCACCAGAGTGTCCGGGCG < 41bp 0.838692407029361 0.54290394891465 0.5734514 0.12888324 prediction 0.591576916229421 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49105130 chrX:49105132 synonymous SNV . 0 23 hm5C_associated_SNPs_55259 0 0 1 DDX24 POSTAR2 ENCODE chrX:49105093-49105133
64251 chr1 203276426 203276426 1 + A T LUAD 203276422 + 203276402 203276442 41 GACCCCTATGAGGTGTCCTACCGCATTGGGGAGGACGGCTC GACCCCTATGAGGTGTCCTACCGCTTTGGGGAGGACGGCTC < 41bp 0.82298216794869 0.527199557426793 0.28785688 0.22322994 prediction 0.591565221043793 Functional Loss - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276422 chr1:203276426 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_55260 0 0 6 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:203276425-203276426
64251 chr4 159140489 159140489 1 + A C UCEC 159140485 + 159140465 159140505 41 TGGCTGGTTTGGATTGGATGCAGAAGAAGTATCAAATCCGC TGGCTGGTTTGGATTGGATGCAGACGAAGTATCAAATCCGC < 41bp 0.795767111386201 0.410732099189552 0.41175252 0.32306218 prediction 0.591534222772401 Functional Loss - TMEM144 ENSG00000164124 CDS Human protein_coding chr4:159140485 chr4:159140489 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_55265 0 0 1 PPIG POSTAR2 ENCODE chr4:159140461-159140549
64251 chr19 806485 806485 1 + G T LUSC 806483 + 806463 806503 41 GGCGGCGGCAGCTGCGGCGGCAGGTCGGATCGCCATCCCGG GGCGGCGGCAGCTGCGGCGGCATGTCGGATCGCCATCCCGG < 41bp 0.79576164036985 0.452197792122959 0.8765315 0.6691519 prediction 0.591523280739701 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806483 chr19:806485 nonsynonymous SNV 0.021 2 23 hm5C_associated_SNPs_55266 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:806470-806520
64251 chr11 1974067 1974067 1 + G T PAAD 1974064 + 1974044 1974084 41 AGGATCAAGAAGCCGGACTACAAGGTCGCCTACGTGCAGCT AGGATCAAGAAGCCGGACTACAATGTCGCCTACGTGCAGCT < 41bp 0.795756712754095 0.416607423767898 0.16320899 0.04928884 prediction 0.59151342550819 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1974064 chr11:1974067 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_55267 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:1974021-1974069
64251 chr16 3338556 3338556 1 + G T PAAD 3338554 + 3338534 3338574 41 TGCAAGGAGGGCCTGAGCCCCAGAGGCCCAGCTCCAGGTAA TGCAAGGAGGGCCTGAGCCCCATAGGCCCAGCTCCAGGTAA < 41bp 0.795753977011741 0.453760872275473 0.88230634 0.2245146 prediction 0.591507954023482 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3338554 chr16:3338556 nonsynonymous SNV 0.034 0 23 hm5C_associated_SNPs_55268 0 0 1 PPIG POSTAR2 ENCODE chr16:3338488-3338574
64251 chr16 50664741 50664741 1 + G T LUAD 50664739 + 50664719 50664759 41 TTCTCGGGCCGGACTCAGACCTGCAGAGCGCAAGGCCCCGA TTCTCGGGCCGGACTCAGACCTTCAGAGCGCAAGGCCCCGA < 41bp 0.845525418065179 0.549784651508227 0.31645077 0.18758792 prediction 0.591481533113905 Functional Loss - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50664739 chr16:50664741 synonymous SNV . 0 23 hm5C_associated_SNPs_55269 0 0 9 BUD13 POSTAR2 ENCODE chr16:50664732-50664768
64251 chr17 21731248 21731248 1 + G T LUAD 21731245 + 21731225 21731265 41 AAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCC AAAATGTGAAGGCCAAGATCCAATATAAAGAAGGCATCCCC < 41bp 0.795735450221626 0.44067226790057 0.4100594 0.13119009 prediction 0.591470900443251 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731245 chr17:21731248 nonsynonymous SNV 0.497 2 24 hm5C_associated_SNPs_55270 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:21731248-21731286
64251 chr14 61995857 61995857 1 + A T KIRC 61995853 + 61995833 61995873 41 CACTGTAAACTGGCAGACTTCGGAATGTGCAAGGAGGGGAT CACTGTAAACTGGCAGACTTCGGATTGTGCAAGGAGGGGAT < 41bp 0.795725535248825 0.491598317098027 0.87583077 0.50370437 prediction 0.59145107049765 Functional Loss - PRKCH ENSG00000027075;ENSG00000258989 CDS Human other chr14:61995853 chr14:61995857 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_55273 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:61995839-61995862
64251 chr1 71512735 71512735 1 - C A LUAD 71512738 - 71512718 71512758 41 ACATGAAGACGCGTGCCACCCGCGCTGTGCTGCTCGGCGTG ACATGAAGACGCGTGCCACCCGCTCTGTGCTGCTCGGCGTG < 41bp 0.846443051100356 0.550717900685889 0.28963444 0.07440904 prediction 0.591450300828934 Functional Loss - PTGER3 ENSG00000050628 CDS Human protein_coding chr1:71512738 chr1:71512735 nonsynonymous SNV 0.940 0 24 hm5C_associated_SNPs_55274 0 0 2 RBM15 POSTAR2 ENCODE chr1:71512654-71512745
64251 chrX 47069354 47069354 1 + G T CESC 47069352 + 47069332 47069372 41 CCAAGTTTGTGGAGCGAACACTGCGGCTGGCAGGCACTCAG CCAAGTTTGTGGAGCGAACACTTCGGCTGGCAGGCACTCAG < 41bp 0.842254994508913 0.546546681650575 0.7027997 0.40044963 prediction 0.591416625716678 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47069352 chrX:47069354 synonymous SNV . 0 23 hm5C_associated_SNPs_55277 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:47069333-47069361
64251 chr19 3118943 3118943 1 + G T SKCM 3118941 + 3118921 3118961 41 GGATGGTGGATGTGGGGGGCCAGCGGTCGGAGCGGAGGAAG GGATGGTGGATGTGGGGGGCCATCGGTCGGAGCGGAGGAAG < 41bp 0.845120607747708 0.549445920168785 0.9139203 0.90861285 prediction 0.591349375157845 Functional Loss - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3118941 chr19:3118943 nonsynonymous SNV 0.387 2 23 hm5C_associated_SNPs_55281 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:3118923-3118960
64251 chr3 28454696 28454696 1 + G T OV 28454693 + 28454673 28454713 41 TTTGAAATGGAGATTGTTATCAAGTGAGGATTCAGCCAAGG TTTGAAATGGAGATTGTTATCAATTGAGGATTCAGCCAAGG < 41bp 0.866795994685007 0.571178630578636 0.66976625 0.14073676 prediction 0.591234728212741 Functional Loss - ZCWPW2 ENSG00000206559 CDS Human protein_coding chr3:28454693 chr3:28454696 nonsynonymous SNV 0.473 0 24 hm5C_associated_SNPs_55288 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:28454637-28454712
64251 chr1 165859500 165859500 1 + G T UCEC 165859498 + 165859478 165859518 41 AGAATGAGGTGGACTATCGCCAGAAGCAGGTGGTCATCCTG AGAATGAGGTGGACTATCGCCATAAGCAGGTGGTCATCCTG < 41bp 0.847742897408056 0.552136480894137 0.9363527 0.90724593 prediction 0.591212833027836 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165859498 chr1:165859500 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55290 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:165859450-165859517
64251 chr1 1558937 1558937 1 + G T LUAD 1558934 + 1558914 1558954 41 GGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCG GGCGGCGAGGGCGGCGTGGGCACTGTGGTGGAGCTTGGCCG < 41bp 0.877901358959456 0.582295595022583 0.8952811 0.8720385 prediction 0.591211527873745 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1558934 chr1:1558937 synonymous SNV . 0 24 hm5C_associated_SNPs_55291 0 0 4 DHX30 POSTAR2 ENCODE chr1:1558869-1558947
64251 chr14 24631533 24631533 1 + G T LUAD 24631530 + 24631510 24631550 41 GACCAGGATGCTGCCTTCTTCAAGGTGAAAGGGCCTGGAAA GACCAGGATGCTGCCTTCTTCAATGTGAAAGGGCCTGGAAA < 41bp 0.795541945875585 0.411387555028658 0.9007684 0.39481914 prediction 0.591083891751171 Functional Loss - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24631530 chr14:24631533 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_55296 0 0 3 PPIG POSTAR2 ENCODE chr14:24631361-24631533
64251 chr19 5668193 5668193 1 + G T SARC 5668190 + 5668170 5668210 41 TAGGCGCGGCAGCTTTGCCCCAGGCGGGGCCTCCCGGGGCC TAGGCGCGGCAGCTTTGCCCCAGTCGGGGCCTCCCGGGGCC < 41bp 0.889548270403314 0.594082908686332 0.6081537 0.06429958 prediction 0.590930723433964 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5668190 chr19:5668193 nonsynonymous SNV 0.327 1 24 hm5C_associated_SNPs_55305 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:5668179-5668209
64251 chr15 41191931 41191931 1 + G T SARC 41191929 + 41191909 41191949 41 ACTGTGGGCGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTC ACTGTGGGCGCCCTGACTCTCTTCTGAGCGAGGAGCGAGTC < 41bp 0.795453850910691 0.467524641768911 0.28109956 0.049592197 prediction 0.590907701821383 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191929 chr15:41191931 synonymous SNV . 0 23 hm5C_associated_SNPs_55306 0 0 5 EIF3B POSTAR2 GSE65004,GSM1585668 chr15:41191895-41191931
64251 chr5 33467768 33467768 1 + G T KIRC 33467766 + 33467746 33467786 41 CTGAAACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCGC CTGAAACTATCGAGCGGCTACATCAGCTCAAAGAGTTCCGC < 41bp 0.795449532392567 0.48218357809117 0.4839774 0.28060633 prediction 0.590899064785135 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33467766 chr5:33467768 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_55307 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:33467715-33467769
64251 chr1 110170834 110170834 1 + G T UCEC 110170831 + 110170811 110170851 41 AGGGCCGTGAACAGACGCTGCGGGAGGTCTTTGAGAGCATG AGGGCCGTGAACAGACGCTGCGGTAGGTCTTTGAGAGCATG < 41bp 0.795449436598288 0.419646632888957 0.4579087 0.109264344 prediction 0.590898873196576 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170831 chr1:110170834 stopgain 0.998 1 24 hm5C_associated_SNPs_55308 0 0 1 GRWD1 POSTAR2 ENCODE chr1:110170738-110170840
64251 chr5 10262689 10262689 1 + G T BLCA 10262687 + 10262667 10262707 41 GGTGTATGGAGGAGGGGCTGCTGAGATATCCTGTGCCCTGG GGTGTATGGAGGAGGGGCTGCTTAGATATCCTGTGCCCTGG < 41bp 0.84426610385306 0.548827724964008 0.83227354 0.32760936 prediction 0.590876757778103 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10262687 chr5:10262689 stopgain 0.958 1 23 hm5C_associated_SNPs_55311 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr5:10262656-10262691
64251 chr10 135123393 135123393 1 + G C UCEC 135123392 + 135123372 135123412 41 ATGTTTGCTCCTTTTGCAAGCGGGCCTTCCCTTCCGGACAC ATGTTTGCTCCTTTTGCAAGCCGGCCTTCCCTTCCGGACAC < 41bp 0.81012323005817 0.514686997026493 0.72590137 0.35606253 prediction 0.590872466063353 Functional Loss - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135123392 chr10:135123393 nonsynonymous SNV 0.542 5 22 hm5C_associated_SNPs_55312 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:135123380-135123400
64251 chr3 135980858 135980858 1 + G T SARC 135980855 + 135980835 135980875 41 GCTGAATGACTCTGGGGGAGCACGGATCCAAGAAGGAGTGG GCTGAATGACTCTGGGGGAGCACTGATCCAAGAAGGAGTGG < 41bp 0.795422637043318 0.414752461000911 0.59672004 0.5303035 prediction 0.590845274086635 Functional Loss - PCCB ENSG00000114054 CDS Human protein_coding chr3:135980855 chr3:135980858 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_55313 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:135980857-135980858
64251 chr1 161198087 161198087 1 + G T UCEC 161198084 + 161198064 161198104 41 GGGGGCCATCTTGACACTGGCTGGGAAGTACTCGGGTATGG GGGGGCCATCTTGACACTGGCTGTGAAGTACTCGGGTATGG < 41bp 0.795383168567351 0.416630273247368 0.4483619 0.16399968 prediction 0.590766337134703 Functional Loss - TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161198084 chr1:161198087 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55323 0 0 2 PRPF8 POSTAR2 ENCODE chr1:161198084-161198118
64251 chr2 187529902 187529902 1 + A C SARC 187529898 + 187529878 187529918 41 TTAAGACAGAAAACCAAACTCGCCAGGTGGTATGTGACCTT TTAAGACAGAAAACCAAACTCGCCCGGTGGTATGTGACCTT < 41bp 0.795375241229852 0.382638096792335 0.75667804 0.11926645 prediction 0.590750482459704 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187529898 chr2:187529902 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_55324 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:187529900-187529920
64251 chr17 7324916 7324916 1 + G T LUSC 7324914 + 7324894 7324934 41 TTGGGTGTACCGTTCCCTAACTGGGAGGTGACTGGAAAAAA TTGGGTGTACCGTTCCCTAACTTGGAGGTGACTGGAAAAAA < 41bp 0.809632225766179 0.51426365715625 0.6351161 0.18736732 prediction 0.590737137219857 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324914 chr17:7324916 nonsynonymous SNV 0.015 2 23 hm5C_associated_SNPs_55325 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7324892-7324929
64251 chr8 17415880 17415880 1 + G T CHOL 17415878 + 17415858 17415898 41 GCACACTCATGGCCTACTCTCTGGTGGCAGCCTGTGTTCTC GCACACTCATGGCCTACTCTCTTGTGGCAGCCTGTGTTCTC < 41bp 0.847727719940743 0.552396308552153 0.526172 0.11961606 prediction 0.59066282277718 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17415878 chr8:17415880 synonymous SNV . 0 23 hm5C_associated_SNPs_55326 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr8:17415848-17415881
64251 chr5 140022623 140022623 1 + G T SARC 140022621 + 140022601 140022641 41 TGGTGCCTTCATTACATCATCTGCAGGTAACAGGGCAATTG TGGTGCCTTCATTACATCATCTTCAGGTAACAGGGCAATTG < 41bp 0.795325520363411 0.485096237976075 0.24705824 0.18640545 prediction 0.590651040726821 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140022621 chr5:140022623 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55327 0 0 1 PRPF8 POSTAR2 ENCODE chr5:140022620-140022673
64251 chr9 37428496 37428496 1 + G T BLCA 37428493 + 37428473 37428513 41 CCCCTCAGTGGTGGCTGGACCTCGTGGAAGCCCCTCTGGCT CCCCTCAGTGGTGGCTGGACCTCTTGGAAGCCCCTCTGGCT < 41bp 0.79530649318115 0.416362440280514 0.47078228 0.13993272 prediction 0.5906129863623 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37428493 chr9:37428496 synonymous SNV . 0 24 hm5C_associated_SNPs_55332 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:37428480-37428500
64251 chr20 25199194 25199194 1 + G T LUAD 25199192 + 25199172 25199212 41 TGTCATTCCCACAGCTACCTCGGGCTCGGGCTGATGTCGGC TGTCATTCCCACAGCTACCTCGTGCTCGGGCTGATGTCGGC < 41bp 0.818335189825524 0.523040731354543 0.9011934 0.11700648 prediction 0.590588916941962 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25199192 chr20:25199194 nonsynonymous SNV 0.890 4 23 hm5C_associated_SNPs_55333 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:25199179-25199212
64251 chr10 89717678 89717678 1 + G T LUSC 89717675 + 89717655 89717695 41 CCAATTCAGGACCCACACGACGGGAAGACAAGTTCATGTAC CCAATTCAGGACCCACACGACGGTAAGACAAGTTCATGTAC < 41bp 0.87576253393169 0.580503896558011 0.43352318 0.24954271 prediction 0.590517274747357 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717675 chr10:89717678 stopgain 0.999 1 24 hm5C_associated_SNPs_55339 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:89717622-89717684
64251 chr19 39882056 39882056 1 + G C BLCA 39882055 + 39882035 39882075 41 CGCACTTCCGGCGGTCTACGCGAGGAAGATGGCTGCATCCC CGCACTTCCGGCGGTCTACGCCAGGAAGATGGCTGCATCCC < 41bp 0.795256113573502 0.497605800106493 0.91059065 0.8962263 prediction 0.590512227147005 Functional Loss - MED29 ENSG00000063322 CDS Human protein_coding chr19:39882055 chr19:39882056 synonymous SNV . 0 22 hm5C_associated_SNPs_55341 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:39882040-39882060
64251 chr13 25171621 25171621 1 + G T UCEC 25171618 + 25171598 25171638 41 GCCGTGGAGATACTTTTTGGCGAGAAATGACTTCCAATGAC GCCGTGGAGATACTTTTTGGCGATAAATGACTTCCAATGAC < 41bp 0.795230903132738 0.449788581877601 0.45717695 0.09818876 prediction 0.590461806265477 Functional Loss - TPTE2P6 ENSG00000205822;ENSG00000243008 ncRNA_exonic Human other chr13:25171618 chr13:25171621 . . 0 24 hm5C_associated_SNPs_55346 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:25171621-25171658
64251 chr20 60701439 60701439 1 + G T PCPG 60701437 + 60701417 60701457 41 TTCCGAGGGATGGCGCCCTACGGCCCGCTGGCGGCCAGCTC TTCCGAGGGATGGCGCCCTACGTCCCGCTGGCGGCCAGCTC < 41bp 0.795227791582592 0.461154641463703 0.37717006 0.26287755 prediction 0.590455583165185 Functional Loss - LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701437 chr20:60701439 nonsynonymous SNV 0.919 2 23 hm5C_associated_SNPs_55348 0 0 3 PRPF8 POSTAR2 ENCODE chr20:60701418-60701531
64251 chr9 104316311 104316311 1 + A T LUSC 104316307 + 104316287 104316327 41 AAAAGGAGATGAAACTATTGCTGGATATGTACCGTTCTGCC AAAAGGAGATGAAACTATTGCTGGTTATGTACCGTTCTGCC < 41bp 0.836097762823781 0.540886758119922 0.7472263 0.24298525 prediction 0.590422009407717 Functional Loss - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104316307 chr9:104316311 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_55353 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr9:104316297-104316328
64251 chr3 111831962 111831962 1 + G T UCEC 111831959 + 111831939 111831979 41 ATATACCTGGTTGTGAGAGTCTGGGGCTTGATCCAACATCC ATATACCTGGTTGTGAGAGTCTGTGGCTTGATCCAACATCC < 41bp 0.795210483243406 0.423421668479607 0.8969027 0.106047004 prediction 0.590420966486812 Functional Loss - C3orf52 ENSG00000114529 CDS Human protein_coding chr3:111831959 chr3:111831962 nonsynonymous SNV 0.529 3 24 hm5C_associated_SNPs_55354 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:111831942-111831966
64251 chr17 37618599 37618599 1 + A C SKCM 37618595 + 37618575 37618615 41 CCGATGACATGGCCTTCAAACTAGACCGAAGGGAGAACGAC CCGATGACATGGCCTTCAAACTAGCCCGAAGGGAGAACGAC < 41bp 0.795179664991127 0.403504796493723 0.13494939 0.40339148 prediction 0.590359329982254 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37618595 chr17:37618599 nonsynonymous SNV 0.890 2 25 hm5C_associated_SNPs_55358 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:37618518-37618603
64251 chr9 139317621 139317621 1 + G T UCEC 139317618 + 139317598 139317638 41 GGAAGCCGGCAGTGGCCGCCCTGGGTGACCTGACTGACCTG GGAAGCCGGCAGTGGCCGCCCTGTGTGACCTGACTGACCTG < 41bp 0.883062265852883 0.587887512024846 0.87648153 0.23408064 prediction 0.590349507656073 Functional Loss - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139317618 chr9:139317621 nonsynonymous SNV 0.538 5 24 hm5C_associated_SNPs_55359 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:139317587-139317629
64251 chr14 76549820 76549820 1 + G T BLCA 76549818 + 76549798 76549838 41 CAGGATGATGTCGGCTGGGACTGGGACCATCTGTTCACTGA CAGGATGATGTCGGCTGGGACTTGGACCATCTGTTCACTGA < 41bp 0.839084656042268 0.543910420866901 0.2914833 0.08954498 prediction 0.590348470350734 Functional Loss - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76549818 chr14:76549820 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55360 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:76549762-76549833
64251 chr2 219114591 219114591 1 + G T UCEC 219114588 + 219114568 219114608 41 GCGAAAACGTCTGACTTCCTCAAGGTGCTGAACCGCGCACG GCGAAAACGTCTGACTTCCTCAATGTGCTGAACCGCGCACG < 41bp 0.893274107931932 0.598112171867551 0.92615557 0.61702794 prediction 0.590323872128762 Functional Loss - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219114588 chr2:219114591 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55361 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:219114553-219114592
64251 chr1 28793151 28793151 1 + G T PRAD 28793149 + 28793129 28793169 41 GTCACCCCTTCCCCAGCACCCAGGACTCTGCCTGCTGCTCC GTCACCCCTTCCCCAGCACCCATGACTCTGCCTGCTGCTCC < 41bp 0.855569673221813 0.560415010935963 0.8926136 0.30731952 prediction 0.5903093245717 Functional Loss - PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28793149 chr1:28793151 nonsynonymous SNV 0.981 4 23 hm5C_associated_SNPs_55363 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:28793108-28793151
64251 chr19 55855145 55855145 1 + A T ESCA 55855141 + 55855121 55855161 41 AGGGCCGGTGAGAATGACTTCAGCATCATGTACTCAACCCG AGGGCCGGTGAGAATGACTTCAGCTTCATGTACTCAACCCG < 41bp 0.820590880041769 0.52545008994724 0.3040735 0.33941162 prediction 0.590281580189057 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55855141 chr19:55855145 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_55365 0 0 3 GRWD1 POSTAR2 ENCODE chr19:55855110-55855198
64251 chr3 50085713 50085713 1 + G T LUAD 50085711 + 50085691 50085731 41 TCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTG TCCAGGACAAAGAAGTTACCCTTGAGTATGTATCAAGCCTG < 41bp 0.795134478589205 0.490573138143203 0.26782647 0.03985405 prediction 0.59026895717841 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50085711 chr3:50085713 stopgain . 0 23 hm5C_associated_SNPs_55366 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:50085687-50085736
64251 chr1 897850 897850 1 + G C LUAD 897849 + 897829 897869 41 CCCGCAGGCAGCATGTCCCACGGGTGAGGCGCGGCCGCGGG CCCGCAGGCAGCATGTCCCACCGGTGAGGCGCGGCCGCGGG < 41bp 0.798370207317915 0.503258490851627 0.90114266 0.25175494 prediction 0.590223432932577 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897849 chr1:897850 nonsynonymous SNV 0.890 2 22 hm5C_associated_SNPs_55369 0 0 2 PRPF8 POSTAR2 ENCODE chr1:897845-897898
64251 chr6 37441358 37441358 1 + A C COAD 37441354 + 37441334 37441374 41 GCATGGTATCTGGCAGTGAGCAGAAGTTCCTCATCGGCCTG GCATGGTATCTGGCAGTGAGCAGACGTTCCTCATCGGCCTG < 41bp 0.795110166676953 0.469536782412716 0.8837758 0.8671869 prediction 0.590220333353906 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37441354 chr6:37441358 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_55370 0 0 3 PPIG POSTAR2 ENCODE chr6:37441345-37441377
64251 chr6 43411980 43411980 1 + G T LUAD 43411977 + 43411957 43411997 41 GCACATCTGGTCGCCTGCTGCAGGAAGAAAGCAAGAAGGAG GCACATCTGGTCGCCTGCTGCAGTAAGAAAGCAAGAAGGAG < 41bp 0.79510714840947 0.406263563789951 0.88466084 0.7649096 prediction 0.590214296818939 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43411977 chr6:43411980 stopgain 0.994 0 24 hm5C_associated_SNPs_55371 0 0 3 BUD13 POSTAR2 ENCODE chr6:43411955-43412015
64251 chr11 119149302 119149302 1 + G T BLCA 119149299 + 119149279 119149319 41 CGTGGTAGATCCGTTTGATCCTAGAGGGAGTGGCAGCCTGT CGTGGTAGATCCGTTTGATCCTATAGGGAGTGGCAGCCTGT < 41bp 0.795087989040585 0.430295895496668 0.40409458 0.41781092 prediction 0.59017597808117 Functional Loss - CBL ENSG00000110395 CDS Human protein_coding chr11:119149299 chr11:119149302 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_55374 0 0 2 FXR2 POSTAR2 ENCODE chr11:119149289-119149349
64251 chr10 82187145 82187145 1 + G T UCEC 82187142 + 82187122 82187162 41 TGTTTATGGGATTTATCCGTCTGGGAGTGTGGTACAACTTC TGTTTATGGGATTTATCCGTCTGTGAGTGTGGTACAACTTC < 41bp 0.795061621835618 0.417767900696862 0.35671544 0.19231707 prediction 0.590123243671237 Functional Loss - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82187142 chr10:82187145 stopgain 0.935 1 24 hm5C_associated_SNPs_55379 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:82187091-82187156
64251 chr10 131565235 131565235 1 + G T BLCA 131565233 + 131565213 131565253 41 CAAGGGAGCGGGAGCTACCTCGGGCTCCCCGCCTGCTGGCC CAAGGGAGCGGGAGCTACCTCGTGCTCCCCGCCTGCTGGCC < 41bp 0.828820766113584 0.533775389037049 0.92996615 0.53043336 prediction 0.59009075415307 Functional Loss - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565233 chr10:131565235 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_55380 0 0 6 GRSF1 POSTAR2 ENCODE chr10:131565158-131565252
64251 chr9 34647958 34647958 1 + G T COAD 34647956 + 34647936 34647976 41 GTGCCCAGTACCCTTGGGTGCAGGTTTGTGAGGTCGCCCCT GTGCCCAGTACCCTTGGGTGCATGTTTGTGAGGTCGCCCCT < 41bp 0.795040384844745 0.450727339989846 0.7377149 0.3001102 prediction 0.590080769689491 Functional Loss - GALT ENSG00000213930 CDS Human protein_coding chr9:34647956 chr9:34647958 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_55382 0 0 4 ALKBH5 POSTAR2 GSE38201,GSM936506 chr9:34647956-34647981
64251 chr19 6744604 6744604 1 + G T SARC 6744601 + 6744581 6744621 41 ATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCTC ATGAACGCAGGGCCACCCGCCTGTGTGCCGGGTATGGGCTC < 41bp 0.894434483939635 0.59941812888937 0.59014505 0.052747548 prediction 0.590032710100529 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744601 chr19:6744604 nonsynonymous SNV 0.550 4 24 hm5C_associated_SNPs_55384 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:6744582-6744620
64251 chr8 40011246 40011246 1 + G T GBM 40011243 + 40011223 40011263 41 AAGAAAGCAGAGGAGAGAGCCAAGATCATTTTTGCCATAGA AAGAAAGCAGAGGAGAGAGCCAATATCATTTTTGCCATAGA < 41bp 0.795009242847199 0.453645527347513 0.5516552 0.11204022 prediction 0.590018485694398 Functional Loss - C8orf4 ENSG00000176907 CDS Human protein_coding chr8:40011243 chr8:40011246 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_55388 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr8:40011240-40011340
64251 chr1 201966632 201966632 1 + A T GBM 201966628 + 201966608 201966648 41 CCAACTGGGGTGAATTCTGGCTCAATGAAGGTTTCACCATG CCAACTGGGGTGAATTCTGGCTCATTGAAGGTTTCACCATG < 41bp 0.794969454843887 0.470677909973814 0.54968494 0.2772752 prediction 0.589938909687774 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966628 chr1:201966632 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_55395 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:201966621-201966654
64251 chr1 65656496 65656496 1 + G T UCEC 65656494 + 65656474 65656514 41 AGTTGGAGAACAGGCGTGGCCAGCACTGGCTCCTTGATGGT AGTTGGAGAACAGGCGTGGCCATCACTGGCTCCTTGATGGT < 41bp 0.794968467311768 0.470071297580568 0.19545001 0.11999342 prediction 0.589936934623536 Functional Loss - AK4 ENSG00000162433 CDS Human protein_coding chr1:65656494 chr1:65656496 nonsynonymous SNV 0.548 0 23 hm5C_associated_SNPs_55396 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:65656479-65656507
64251 chr19 38896245 38896245 1 + A T BLCA 38896241 + 38896221 38896261 41 CCTCAAGCGCCTTGACCTCACTACATCTGCTTTCCACTGGA CCTCAAGCGCCTTGACCTCACTACTTCTGCTTTCCACTGGA < 41bp 0.794967016794656 0.474108582351099 0.89007294 0.27626392 prediction 0.589934033589311 Functional Loss - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38896241 chr19:38896245 synonymous SNV . 0 25 hm5C_associated_SNPs_55397 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38896235-38896265
64251 chr2 27282224 27282224 1 + G T STAD 27282221 + 27282201 27282241 41 GGCCTGCAGGGCTGCCAGGCCTGGGCTCTAGTACCCAAAAG GGCCTGCAGGGCTGCCAGGCCTGTGCTCTAGTACCCAAAAG < 41bp 0.887757431872245 0.592803274996685 0.27910566 0.16688636 prediction 0.589908313751121 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282221 chr2:27282224 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55399 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27282206-27282241
64251 chr19 57085872 57085872 1 + G T UCEC 57085870 + 57085850 57085890 41 AAGGTGATGTTAGAAAACTACAGGAACCTAGTTTCAGTGGG AAGGTGATGTTAGAAAACTACATGAACCTAGTTTCAGTGGG < 41bp 0.79495000589288 0.473213837612197 0.2869655 0.07607299 prediction 0.58990001178576 Functional Loss - ZNF470 ENSG00000197016 CDS Human protein_coding chr19:57085870 chr19:57085872 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_55400 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57085846-57085874
64251 chr19 57085873 57085873 1 + G T UCEC 57085870 + 57085850 57085890 41 AAGGTGATGTTAGAAAACTACAGGAACCTAGTTTCAGTGGG AAGGTGATGTTAGAAAACTACAGTAACCTAGTTTCAGTGGG < 41bp 0.79495000589288 0.429266389421424 0.2869655 0.05529812 prediction 0.58990001178576 Functional Loss - ZNF470 ENSG00000197016 CDS Human protein_coding chr19:57085870 chr19:57085873 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_55401 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57085846-57085874
64251 chr4 1305911 1305911 1 + G T BLCA 1305908 + 1305888 1305928 41 TGGACTCCGTGGTCAGCCTGCTGGACGGCGTGGTGGAGAAG TGGACTCCGTGGTCAGCCTGCTGTACGGCGTGGTGGAGAAG < 41bp 0.874969574403366 0.580036144797031 0.37692127 0.18442243 prediction 0.58986685921267 Functional Loss - MAEA ENSG00000090316 CDS Human protein_coding chr4:1305908 chr4:1305911 nonsynonymous SNV 0.910 4 24 hm5C_associated_SNPs_55403 0 0 3 GRWD1 POSTAR2 ENCODE chr4:1305876-1305958
64251 chr19 52206582 52206582 1 + G T UCEC 52206580 + 52206560 52206600 41 CACCTATTCCTGGAAGTTCGCAGGAGGAGGTGTGAGTCGGG CACCTATTCCTGGAAGTTCGCATGAGGAGGTGTGAGTCGGG < 41bp 0.794924190350266 0.467392970158728 0.9055996 0.4582219 prediction 0.589848380700531 Functional Loss - SPACA6 ENSG00000182310 ncRNA_exonic Human protein_coding chr19:52206580 chr19:52206582 . . 0 23 hm5C_associated_SNPs_55406 0 0 1 DDX24 POSTAR2 ENCODE chr19:52206529-52206592
64251 chr1 156703953 156703953 1 + G T LUAD 156703951 + 156703931 156703971 41 GCCTCCACGCCTGTGGGGATCTGAGTGTTGCCTTGCTGAGA GCCTCCACGCCTGTGGGGATCTTAGTGTTGCCTTGCTGAGA < 41bp 0.794920151885174 0.459455232497941 0.30662948 0.14821398 prediction 0.589840303770347 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703951 chr1:156703953 synonymous SNV . 0 23 hm5C_associated_SNPs_55407 0 0 1 SND1 POSTAR2 ENCODE chr1:156703942-156704076
64251 chr2 208432219 208432219 1 + G T UCEC 208432217 + 208432197 208432237 41 TTGCAGAAAGTGAAGATTCACAGGAGTCAGTGGATAGTGTA TTGCAGAAAGTGAAGATTCACATGAGTCAGTGGATAGTGTA < 41bp 0.814745835909461 0.519837415175506 0.86728776 0.13922885 prediction 0.58981684146791 Functional Loss - CREB1 ENSG00000118260 CDS Human protein_coding chr2:208432217 chr2:208432219 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_55411 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:208432192-208432228
64251 chr8 22438988 22438988 1 + G C HNSC 22438987 + 22438967 22439007 41 GCGGAGGGCATGCTGCATGCCGAGGCCCAGAGCAAGATCCG GCGGAGGGCATGCTGCATGCCCAGGCCCAGAGCAAGATCCG < 41bp 0.798630115409271 0.503780513880828 0.69993687 0.07137999 prediction 0.589699203056887 Functional Loss - PDLIM2 ENSG00000120913 CDS Human protein_coding chr8:22438987 chr8:22438988 nonsynonymous SNV 0.626 3 22 hm5C_associated_SNPs_55419 0 0 1 PPIG POSTAR2 ENCODE chr8:22438936-22439040
64251 chr14 59954424 59954424 1 + G T UCEC 59954422 + 59954402 59954442 41 GAGGACAGAGAACGAATGCACAGAAATATTGTCAGCCTTGC GAGGACAGAGAACGAATGCACATAAATATTGTCAGCCTTGC < 41bp 0.794832979309534 0.478805553230138 0.2624156 0.16465104 prediction 0.589665958619067 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59954422 chr14:59954424 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_55424 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:59954389-59954447
64251 chr17 77044053 77044053 1 + G T UCEC 77044051 + 77044031 77044071 41 TGATGCTGGAGCTGCGAGAGCAGGACCAGGTGTGGGTACGC TGATGCTGGAGCTGCGAGAGCATGACCAGGTGTGGGTACGC < 41bp 0.836064100518868 0.541232820233235 0.745432 0.12550658 prediction 0.589662560571267 Functional Loss - C1QTNF1 ENSG00000173918 CDS Human protein_coding chr17:77044051 chr17:77044053 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_55425 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:77044050-77044082
64251 chr6 44117702 44117702 1 + G T UCEC 44117699 + 44117679 44117719 41 CTTCTTTGAAGCCCACTGGACACGGTAAGGTGCCTCCACTC CTTCTTTGAAGCCCACTGGACACTGTAAGGTGCCTCCACTC < 41bp 0.794826298050432 0.405532121882229 0.09847641 0.011140496 prediction 0.589652596100865 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44117699 chr6:44117702 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_55427 0 0 6 DDX24 POSTAR2 ENCODE chr6:44117678-44117702
64251 chr4 39776532 39776532 1 + G T UCEC 39776530 + 39776510 39776550 41 CTGCAGAGCCAGATGATCCACAGGATGCTGTAGTAGCAAAT CTGCAGAGCCAGATGATCCACATGATGCTGTAGTAGCAAAT < 41bp 0.813193115855254 0.518371649176402 0.4359287 0.08063725 prediction 0.589642933357704 Functional Loss - UBE2K ENSG00000078140 CDS Human protein_coding chr4:39776530 chr4:39776532 nonsynonymous SNV 0.979 3 23 hm5C_associated_SNPs_55428 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:39776475-39776543
64251 chr17 27017988 27017988 1 + G T LUAD 27017986 + 27017966 27018006 41 GCATTGCCCACAGGCGTCCCCAGGGTGAGAGCTATGACCAG GCATTGCCCACAGGCGTCCCCATGGTGAGAGCTATGACCAG < 41bp 0.794802151269905 0.462685667604307 0.9044932 0.16956437 prediction 0.58960430253981 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27017986 chr17:27017988 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55429 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr17:27017959-27017997
64251 chr10 104495661 104495661 1 + G T UCEC 104495659 + 104495639 104495679 41 TGGCGTGTGGGCTTTTCCCACAGAAATGGTATCTGCTGTTC TGGCGTGTGGGCTTTTCCCACATAAATGGTATCTGCTGTTC < 41bp 0.829608356144579 0.534809565781662 0.46361652 0.1771999 prediction 0.589597580725833 Functional Loss - SFXN2 ENSG00000156398 CDS Human protein_coding chr10:104495659 chr10:104495661 nonsynonymous SNV 0.972 4 23 hm5C_associated_SNPs_55431 0 0 4 PPIG POSTAR2 ENCODE chr10:104495617-104495677
64251 chr1 231133000 231133000 1 + G T UCEC 231132998 + 231132978 231133018 41 ATTATGCCATCTTTAAATCTCAGGACTTCTGAAGAGGTACT ATTATGCCATCTTTAAATCTCATGACTTCTGAAGAGGTACT < 41bp 0.794784808957268 0.492013733262615 0.76874477 0.29323238 prediction 0.589569617914536 Functional Loss - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231132998 chr1:231133000 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_55432 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:231132973-231133000
64251 chr8 94752736 94752736 1 + G T CESC 94752734 + 94752714 94752754 41 AACATTCCACCCTAACTCGCCAGAGGGTGAACTGCCCCCAG AACATTCCACCCTAACTCGCCATAGGGTGAACTGCCCCCAG < 41bp 0.804229964362667 0.509481181735958 0.9397235 0.89263064 prediction 0.589497565253419 Functional Loss - RBM12B-AS1 ENSG00000212998 CDS Human other chr8:94752734 chr8:94752736 stopgain . 0 23 hm5C_associated_SNPs_55435 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:94752732-94752770
64251 chr14 100317246 100317246 1 + G T STAD 100317243 + 100317223 100317263 41 TGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATG TGACAGACCGCATTGCTTCACTGTAGCAGAGAGTCCAGATG < 41bp 0.880700529176225 0.585984990649392 0.2621875 0.07582405 prediction 0.589431077053667 Functional Loss - EML1 ENSG00000066629 CDS Human protein_coding chr14:100317243 chr14:100317246 stopgain 1.000 1 24 hm5C_associated_SNPs_55439 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:100317227-100317249
64251 chr3 113499941 113499941 1 + G T LUAD 113499938 + 113499918 113499958 41 CGGGTGCAGCCATGTATGAGCTGGTGAGAGTGGGCCACAGC CGGGTGCAGCCATGTATGAGCTGTTGAGAGTGGGCCACAGC < 41bp 0.794693079612484 0.414968800268394 0.30219296 0.14926052 prediction 0.589386159224967 Functional Loss - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113499938 chr3:113499941 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_55442 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr3:113499916-113499945
64251 chr9 116116549 116116549 1 + G T TGCT 116116547 + 116116527 116116567 41 TTGTGGACCAGTGTGAGAGGCTGCAGTTACAGAGTGCTGCC TTGTGGACCAGTGTGAGAGGCTTCAGTTACAGAGTGCTGCC < 41bp 0.794684056172096 0.468453720981247 0.3995222 0.37796232 prediction 0.589368112344193 Functional Loss - BSPRY ENSG00000119411 CDS Human protein_coding chr9:116116547 chr9:116116549 synonymous SNV . 0 23 hm5C_associated_SNPs_55444 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:116116525-116116549
64251 chr11 71712898 71712898 1 + G T rs115537466 71712896 + 71712876 71712916 41 CCAGCCACAGCAGTCCACAGCAGCAGGGTTAAGACTCAGCA CCAGCCACAGCAGTCCACAGCATCAGGGTTAAGACTCAGCA < 41bp 0.833316690799312 0.538634689618851 0.32217982 0.15021011 prediction 0.589364002360922 Functional Loss - IL18BP ENSG00000137496 CDS Human protein_coding chr11:71712896 chr11:71712898 nonsynonymous SNV 0.064 2 23 hm5C_associated_SNPs_55445 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:71712896-71712923
64251 chr19 11350899 11350899 1 + G T LIHC 11350897 + 11350877 11350917 41 GCACAGAAGGTGCTACGGGACAGCGTGCAGCGGCTAGAAGT GCACAGAAGGTGCTACGGGACATCGTGCAGCGGCTAGAAGT < 41bp 0.794652366506719 0.45985822432611 0.11241856 0.048713923 prediction 0.589304733013437 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350897 chr19:11350899 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_55448 0 0 3 LIN28B POSTAR2 ENCODE chr19:11350814-11350905
64251 chr8 146278531 146278531 1 + G T COAD 146278529 + 146278509 146278549 41 GGCAGAAACCCACCCCGAAACAGAGTAAGGGACCCTTCTGT GGCAGAAACCCACCCCGAAACATAGTAAGGGACCCTTCTGT < 41bp 0.79464544788543 0.454488841815542 0.87685984 0.049406946 prediction 0.58929089577086 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278529 chr8:146278531 nonsynonymous SNV 0.964 4 23 hm5C_associated_SNPs_55451 0 0 2 PRPF8 POSTAR2 ENCODE chr8:146278531-146278574
64251 chr11 10521649 10521649 1 + G T SARC 10521647 + 10521627 10521667 41 GCCCAGGTGACGGGGTTTGACAGCGTGGATGATGAGTCCAA GCCCAGGTGACGGGGTTTGACATCGTGGATGATGAGTCCAA < 41bp 0.845764250959972 0.551119865614615 0.8654013 0.40062267 prediction 0.589288770690715 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10521647 chr11:10521649 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_55452 0 0 2 RBM15 POSTAR2 ENCODE chr11:10521574-10521730
64251 chr22 42956231 42956231 1 + G T SKCM 42956228 + 42956208 42956248 41 AGCCACTTGAGTGAGGAGTGCGGGGAGCTTCTCCTGCAAAG AGCCACTTGAGTGAGGAGTGCGGTGAGCTTCTCCTGCAAAG < 41bp 0.899212369348016 0.60458963749833 0.8992592 0.3814659 prediction 0.589245463699372 Functional Loss - SERHL2 ENSG00000183569 CDS Human protein_coding chr22:42956228 chr22:42956231 synonymous SNV . 0 24 hm5C_associated_SNPs_55456 0 0 4 DDX24 POSTAR2 ENCODE chr22:42956188-42956267
64251 chr11 61545260 61545260 1 + A C rs200421234 61545256 + 61545236 61545276 41 TCGCGCATGCGGCTGGTGCACTACAGATACAAGCCCGAGTT TCGCGCATGCGGCTGGTGCACTACCGATACAAGCCCGAGTT < 41bp 0.794597641399735 0.373038037408515 0.24045652 0.050902396 prediction 0.58919528279947 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61545256 chr11:61545260 synonymous SNV . 0 25 hm5C_associated_SNPs_55460 0 0 4 GRWD1 POSTAR2 ENCODE chr11:61545231-61545306
64251 chr22 35779128 35779128 1 + A C STAD 35779124 + 35779104 35779144 41 CCCAGGATTTGTCAGAGGCCCTGAAGGAGGCCACCAAGGAG CCCAGGATTTGTCAGAGGCCCTGACGGAGGCCACCAAGGAG < 41bp 0.794594678307057 0.388544387300193 0.1424894 0.052691787 prediction 0.589189356614115 Functional Loss - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35779124 chr22:35779128 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_55461 0 0 1 GRWD1 POSTAR2 ENCODE chr22:35779094-35779153
64251 chr7 6777082 6777082 1 + G T UCEC 6777080 + 6777060 6777100 41 TCCGTGGATTCTGAGGGGTTCAGCATCCCAGACACGGGCAG TCCGTGGATTCTGAGGGGTTCATCATCCCAGACACGGGCAG < 41bp 0.831074589362139 0.536492598041154 0.46551147 0.20713356 prediction 0.589163982641969 Functional Loss - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777080 chr7:6777082 . . 0 23 hm5C_associated_SNPs_55464 0 0 1 EIF3H POSTAR2 ENCODE chr7:6777061-6777147
64251 chr10 5494850 5494850 1 + G T UCEC 5494848 + 5494828 5494868 41 ATGAAATGTCCCGAGGTGAACAGGATTTAATTGAGGATCTC ATGAAATGTCCCGAGGTGAACATGATTTAATTGAGGATCTC < 41bp 0.829433058969159 0.534888761504266 0.8170643 0.2595998 prediction 0.589088594929785 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5494848 chr10:5494850 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_55469 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5494826-5494850
64251 chr20 62587751 62587751 1 - C A STAD 62587754 - 62587734 62587774 41 GGCCCATGCGCGCCGCCCGGCCAGGCCCGCAAAGAGGCCTC GGCCCATGCGCGCCGCCCGGCCATGCCCGCAAAGAGGCCTC < 41bp 0.794544283595244 0.433166775380213 0.119003326 0.070729345 prediction 0.589088567190488 Functional Loss - UCKL1-AS1 ENSG00000198276 UTR5 Human protein_coding chr20:62587754 chr20:62587751 . . 0 24 hm5C_associated_SNPs_55470 0 0 2 DDX3X POSTAR2 ENCODE chr20:62587612-62587751
64251 chr1 38174366 38174366 1 + G T rs7526362 38174364 + 38174344 38174384 41 TCCTCTTCACCCTGCCCTGCCTGCAGTTGAGGGGGCGAAGA TCCTCTTCACCCTGCCCTGCCTTCAGTTGAGGGGGCGAAGA < 41bp 0.794541114333855 0.490477752675303 0.3488842 0.6578703 prediction 0.589082228667709 Functional Loss - CDCA8 ENSG00000134690 UTR3 Human protein_coding chr1:38174364 chr1:38174366 . . 0 23 hm5C_associated_SNPs_55471 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:38174355-38174376
64251 chr2 169417767 169417767 1 + G T SARC 169417765 + 169417745 169417785 41 ACTGGGATGTTCGAAGCATTCAGCGCTGGTTTCGACAAAGA ACTGGGATGTTCGAAGCATTCATCGCTGGTTTCGACAAAGA < 41bp 0.827875542798545 0.533341885926945 0.2776227 0.060799032 prediction 0.5890673137432 Functional Loss - CERS6 ENSG00000172292 CDS Human protein_coding chr2:169417765 chr2:169417767 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_55472 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:169417763-169417779
64251 chr6 26104260 26104260 1 + G T LUSC 26104257 + 26104237 26104277 41 AGGTGCTCCGGGATAACATCCAGGGCATTACAAAACCGGCT AGGTGCTCCGGGATAACATCCAGTGCATTACAAAACCGGCT < 41bp 0.873922108707537 0.5793914818243 0.9061757 0.8290497 prediction 0.589061253766474 Functional Loss - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104257 chr6:26104260 nonsynonymous SNV 0.847 2 24 hm5C_associated_SNPs_55473 0 0 46 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26104160-26104260
64251 chr19 44610994 44610994 1 - T A GBM 44610998 - 44610978 44611018 41 CACACATTTGAACGGTTTCTCTCCAGTGTGGACTCTCTGAT CACACATTTGAACGGTTTCTCTCCTGTGTGGACTCTCTGAT < 41bp 0.822783604778665 0.528266483664088 0.94084126 0.049442887 prediction 0.589034242229154 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610998 chr19:44610994 synonymous SNV . 0 25 hm5C_associated_SNPs_55474 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44610971-44610997
64251 chr16 85838592 85838592 1 + G T LUSC 85838590 + 85838570 85838610 41 CGCTCCCAGCTTATATGGATCGGCGTGACCACCCCTTGCCG CGCTCCCAGCTTATATGGATCGTCGTGACCACCCCTTGCCG < 41bp 0.84468900866598 0.550206787920491 0.76960385 0.06532645 prediction 0.588964441490978 Functional Loss - COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85838590 chr16:85838592 synonymous SNV . 0 23 hm5C_associated_SNPs_55480 0 0 37 TARDBP POSTAR2 DRA001158,DRS012387 chr16:85838534-85838797
64251 chr7 140373759 140373759 1 + G T LUSC 140373757 + 140373737 140373777 41 CGGGAACCTGTGGGCTCAGGCTGCGTGGCCCAGGTGTACAA CGGGAACCTGTGGGCTCAGGCTTCGTGGCCCAGGTGTACAA < 41bp 0.832618792878473 0.538161647959594 0.16660321 0.115463346 prediction 0.588914289837758 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373757 chr7:140373759 nonsynonymous SNV 0.943 4 23 hm5C_associated_SNPs_55486 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:140373740-140373760
64251 chr2 113959632 113959632 1 + G T rs547017356 113959630 + 113959610 113959650 41 CTCGGGGGGCTTCAAGGGCTCTGCACGGCTGTGGGGCCCTG CTCGGGGGGCTTCAAGGGCTCTTCACGGCTGTGGGGCCCTG < 41bp 0.794446363328762 0.491848492590904 0.46681932 0.26123172 prediction 0.588892726657524 Functional Loss - PSD4 ENSG00000125637 UTR3 Human protein_coding chr2:113959630 chr2:113959632 . . 0 23 hm5C_associated_SNPs_55487 0 0 1 DGCR8 POSTAR2 ENCODE chr2:113959628-113959650
64251 chr1 1421191 1421191 1 + G T UCEC 1421189 + 1421169 1421209 41 GGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTT GGCGGCTCCTCAGTCGACCCCATGACGTGCTGGAGGGTGTT < 41bp 0.794446063515121 0.452637023952241 0.52667195 0.07500589 prediction 0.588892127030242 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421189 chr1:1421191 nonsynonymous SNV 0.015 3 23 hm5C_associated_SNPs_55488 0 0 3 BUD13 POSTAR2 ENCODE chr1:1421159-1421191
64251 chr7 65552346 65552346 1 + G T LUAD 65552343 + 65552323 65552363 41 GGGCCATTGCAGGCAATCCCCTGGGTGTGGACCGAGAGCTG GGGCCATTGCAGGCAATCCCCTGTGTGTGGACCGAGAGCTG < 41bp 0.899109272156364 0.604676816697772 0.77748895 0.33267233 prediction 0.588864910917184 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65552343 chr7:65552346 nonsynonymous SNV 0.985 5 24 hm5C_associated_SNPs_55489 0 0 4 BUD13 POSTAR2 ENCODE chr7:65552325-65552429
64251 chr16 89211809 89211809 1 + G T LUAD 89211807 + 89211787 89211827 41 GCTGGCCCACCCCAGCATCACAGGTGCGTGGCCGGACTTGG GCTGGCCCACCCCAGCATCACATGTGCGTGGCCGGACTTGG < 41bp 0.794418824458921 0.461287465716526 0.9097542 0.821121 prediction 0.588837648917841 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89211807 chr16:89211809 nonsynonymous SNV 0.014 3 23 hm5C_associated_SNPs_55494 0 0 4 BUD13 POSTAR2 ENCODE chr16:89211688-89211811
64251 chr16 77228317 77228317 1 + G T LIHC 77228315 + 77228295 77228335 41 CTCAGTCAGCAGCCCAGCTGCGGGGGGAGCTGCTAGCTGTG CTCAGTCAGCAGCCCAGCTGCGTGGGGAGCTGCTAGCTGTG < 41bp 0.854084063199002 0.559673152088201 0.9331254 0.86869067 prediction 0.588821822221601 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228315 chr16:77228317 synonymous SNV . 0 23 hm5C_associated_SNPs_55496 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:77228306-77228330
64251 chr15 99828050 99828050 1 + G T OV 99828048 + 99828028 99828068 41 CTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCC CTCTTGTAAAACTCCAATGTCTTGATCTTAGTGACAATGCC < 41bp 0.794405858422665 0.490417631293003 0.17508152 0.06546965 prediction 0.588811716845329 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99828048 chr15:99828050 synonymous SNV . 0 23 hm5C_associated_SNPs_55497 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:99828034-99828071
64251 chr11 63764374 63764374 1 + G T UCEC 63764372 + 63764352 63764392 41 GCAAGGAAGACCTGGTGTCCCAGGGCTTCACTGAATTCACA GCAAGGAAGACCTGGTGTCCCATGGCTTCACTGAATTCACA < 41bp 0.794384186853145 0.459266113659226 0.7115993 0.057565063 prediction 0.588768373706289 Functional Loss - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63764372 chr11:63764374 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55499 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63764366-63764404
64251 chr5 98105328 98105328 1 - T A rs530974561 98105332 - 98105312 98105352 41 CTTCAACAAAATAAACAACTCACCACAGGCATTCCCTTGTC CTTCAACAAAATAAACAACTCACCTCAGGCATTCCCTTGTC < 41bp 0.801236347652288 0.506853036197044 0.14139834 0.052552253 prediction 0.588766622910488 Functional Loss - RGMB-AS1 ENSG00000246763 ncRNA_exonic Human antisense chr5:98105332 chr5:98105328 . . 0 25 hm5C_associated_SNPs_55500 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:98105324-98105356
64251 chr15 44620906 44620906 1 + G T LUAD 44620903 + 44620883 44620923 41 AGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAA AGCAACTTGCTGAGCTTCGTCAGTAATTTCTTCGACAAGAA < 41bp 0.886613092105809 0.592241078400431 0.67336464 0.17346466 prediction 0.588744027410756 Functional Loss - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44620903 chr15:44620906 stopgain 1.000 1 24 hm5C_associated_SNPs_55501 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:44620884-44620916
64251 chr5 178987118 178987118 1 + G T PAAD 178987115 + 178987095 178987135 41 TGCTCCAGTCGGCTCTGAGCCTGGGCCGCAGCCTGGATGCG TGCTCCAGTCGGCTCTGAGCCTGTGCCGCAGCCTGGATGCG < 41bp 0.794347753194133 0.41406337080716 0.58823353 0.21951127 prediction 0.588695506388266 Functional Loss - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:178987115 chr5:178987118 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55504 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr5:178987100-178987120
64251 chr9 139745012 139745012 1 + G T rs149543778 139745009 + 139744989 139745029 41 CAGGCCCCAGGATCCACCATCAAGGTTTGCTTGCCTGTGGA CAGGCCCCAGGATCCACCATCAATGTTTGCTTGCCTGTGGA < 41bp 0.794343379089887 0.421470998620308 0.9116581 0.761539 prediction 0.588686758179774 Functional Loss - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139745009 chr9:139745012 nonsynonymous SNV 0.001 3 24 hm5C_associated_SNPs_55506 0 0 1 SRSF1 POSTAR2 ENCODE chr9:139744975-139745013
64251 chr4 1807569 1807569 1 + G C SKCM 1807568 + 1807548 1807588 41 CCGGGCCTGGACTACTCCTTCGACACCTGCAAGCCGCCCGA CCGGGCCTGGACTACTCCTTCCACACCTGCAAGCCGCCCGA < 41bp 0.795175270566609 0.500867780924892 0.27911198 0.15738118 prediction 0.588614979283434 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807568 chr4:1807569 nonsynonymous SNV 0.129 4 22 hm5C_associated_SNPs_55511 0 0 2 DDX24 POSTAR2 ENCODE chr4:1807521-1807571
64251 chr3 52836408 52836408 1 + A C UCEC 52836404 + 52836384 52836424 41 CGGGTGTGGAGATGGAGTACCCCGAGAACGCTATCCTGGAC CGGGTGTGGAGATGGAGTACCCCGCGAACGCTATCCTGGAC < 41bp 0.794282371938345 0.388748208676997 0.27816963 0.19380939 prediction 0.58856474387669 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836404 chr3:52836408 nonsynonymous SNV 0.974 0 25 hm5C_associated_SNPs_55517 0 0 4 LIN28B POSTAR2 ENCODE chr3:52836394-52836436
64251 chr15 91186152 91186152 1 + G T rs141269819 91186150 + 91186130 91186170 41 GGGAAGGAAGACAGGGACTGCAGGTGTCTCATACTCAGTGG GGGAAGGAAGACAGGGACTGCATGTGTCTCATACTCAGTGG < 41bp 0.794258551152272 0.495573862709302 0.9383607 0.61144286 prediction 0.588517102304543 Functional Loss - CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91186150 chr15:91186152 . . 0 23 hm5C_associated_SNPs_55519 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:91186138-91186156
64251 chr13 88327997 88327997 1 + G T rs149464166 88327995 + 88327975 88328015 41 ATCTAGGTAGCAATGTTATCCAGGACATTGAGACCGGGGCT ATCTAGGTAGCAATGTTATCCATGACATTGAGACCGGGGCT < 41bp 0.812397212875869 0.518145974131186 0.7411414 0.15583923 prediction 0.588502477489365 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327995 chr13:88327997 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55521 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:88327988-88328014
64251 chr11 111959712 111959712 1 + A T LUAD 111959708 + 111959688 111959728 41 TGCGATGGACTATTCCCTGGCTGCAGCCCTCACTCTTCATG TGCGATGGACTATTCCCTGGCTGCTGCCCTCACTCTTCATG < 41bp 0.794246626388327 0.477945162248644 0.034411997 0.04418239 prediction 0.588493252776654 Functional Loss - SDHD ENSG00000204370;ENSG00000255292 CDS Human other chr11:111959708 chr11:111959712 synonymous SNV . 0 25 hm5C_associated_SNPs_55524 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:111959692-111959717
64251 chr15 29346997 29346997 1 + A C UCEC 29346993 + 29346973 29347013 41 CCCCAGAGAGGCTTCAAGCCCAAGACCAGGACCCCAGAAGA CCCCAGAGAGGCTTCAAGCCCAAGCCCAGGACCCCAGAAGA < 41bp 0.794242980683772 0.400606909147791 0.3427952 0.22698084 prediction 0.588485961367545 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346993 chr15:29346997 nonsynonymous SNV 0.986 0 25 hm5C_associated_SNPs_55526 0 0 1 DDX24 POSTAR2 ENCODE chr15:29346972-29347012
64251 chr7 75612853 75612853 1 + G T COAD 75612850 + 75612830 75612870 41 CCACCCAGCCCCTTTGATGCCAAGAATCCGTTCCTGGCTGC CCACCCAGCCCCTTTGATGCCAATAATCCGTTCCTGGCTGC < 41bp 0.894214300415817 0.599981346930249 0.34468699 0.09779331 prediction 0.588465906971136 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75612850 chr7:75612853 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_55527 0 0 5 DDX24 POSTAR2 ENCODE chr7:75612853-75612924
64251 chr19 56173907 56173907 1 + G T BLCA 56173904 + 56173884 56173924 41 TCTTCAACGCCCAGATGCGCCTGGGGGGGCTGACCCAGGCC TCTTCAACGCCCAGATGCGCCTGTGGGGGCTGACCCAGGCC < 41bp 0.896902746531976 0.602670733758277 0.90143764 0.84212613 prediction 0.5884640255474 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56173904 chr19:56173907 nonsynonymous SNV 0.551 2 24 hm5C_associated_SNPs_55528 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:56173871-56173909
64251 chr2 32855736 32855736 1 + G T BLCA 32855733 + 32855713 32855753 41 AGAAGCAGGTAGTAACATTCCTGGATTACTCAACAGATTTG AGAAGCAGGTAGTAACATTCCTGTATTACTCAACAGATTTG < 41bp 0.869221455898939 0.575000951916246 0.22797206 0.13251951 prediction 0.588441007965386 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32855733 chr2:32855736 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_55529 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32855716-32855763
64251 chr22 37962592 37962592 1 + G T HNSC 37962590 + 37962570 37962610 41 GGGAGCACCCATCGCTCACCCCGCAGCTTCCTGGCCAAGAA GGGAGCACCCATCGCTCACCCCTCAGCTTCCTGGCCAAGAA < 41bp 0.794220154013944 0.473488826776238 0.2622381 0.15726152 prediction 0.588440308027887 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962590 chr22:37962592 nonsynonymous SNV 0.964 2 23 hm5C_associated_SNPs_55530 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr22:37962574-37962603
64251 chr22 37962594 37962594 1 + A T LUSC 37962590 + 37962570 37962610 41 GGGAGCACCCATCGCTCACCCCGCAGCTTCCTGGCCAAGAA GGGAGCACCCATCGCTCACCCCGCTGCTTCCTGGCCAAGAA < 41bp 0.794220154013944 0.488780816096613 0.2622381 0.22421455 prediction 0.588440308027887 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962590 chr22:37962594 nonsynonymous SNV 0.926 1 25 hm5C_associated_SNPs_55531 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr22:37962574-37962603
64251 chr16 31733987 31733987 1 + G T HNSC 31733984 + 31733964 31734004 41 GGATGTGGCCATAGAATTCTCTCGGGAGGAGTGGGAACACC GGATGTGGCCATAGAATTCTCTCTGGAGGAGTGGGAACACC < 41bp 0.794211792411382 0.470279978095213 0.16203657 0.16053677 prediction 0.588423584822764 Functional Loss - ZNF720 ENSG00000197302 CDS Human protein_coding chr16:31733984 chr16:31733987 nonsynonymous SNV 0.597 0 24 hm5C_associated_SNPs_55532 0 0 1 PRPF8 POSTAR2 ENCODE chr16:31733968-31734106
64251 chr16 72130817 72130817 1 + G T LUAD 72130815 + 72130795 72130835 41 GGCAGAGAGAGCGGGAGCGGCGGGAACATGGTGTCTATGCC GGCAGAGAGAGCGGGAGCGGCGTGAACATGGTGTCTATGCC < 41bp 0.834108359636116 0.539911019087744 0.8846322 0.45779523 prediction 0.588394681096746 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72130815 chr16:72130817 synonymous SNV . 0 23 hm5C_associated_SNPs_55533 0 0 5 FXR2 POSTAR2 ENCODE chr16:72130788-72130829
64251 chr13 48832293 48832293 1 + A C PAAD 48832289 + 48832269 48832309 41 CAGCCTATTTAGATCTTAACCTGGATAAGTGCTATGTGATC CAGCCTATTTAGATCTTAACCTGGCTAAGTGCTATGTGATC < 41bp 0.896274877389214 0.602089973781158 0.1907512 0.22086474 prediction 0.588369807216112 Functional Loss - ITM2B ENSG00000136156 CDS Human protein_coding chr13:48832289 chr13:48832293 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_55535 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr13:48832261-48832315
64251 chr5 141314074 141314074 1 + G T STAD 141314071 + 141314051 141314091 41 GACCACAGGCCCAAGCTTTCCTCGGGGTGCTTTTCACCAAG GACCACAGGCCCAAGCTTTCCTCTGGGTGCTTTTCACCAAG < 41bp 0.891235957984549 0.597051093602805 0.74271333 0.1461406 prediction 0.588369728763487 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141314071 chr5:141314074 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_55536 0 0 6 BUD13 POSTAR2 ENCODE chr5:141314061-141314163
64251 chrX 1534204 1534204 1 + G T rs183517151 1534201 + 1534181 1534221 41 GGCCACACTGTGACGGCTCTCGGGTCAGTTCCTTCCGTGAC GGCCACACTGTGACGGCTCTCGGTTCAGTTCCTTCCGTGAC < 41bp 0.79418458648638 0.414693727706948 0.9389623 0.31573224 prediction 0.588369172972759 Functional Loss - ASMTL-AS1 ENSG00000169093 intronic Human protein_coding chrX:1534201 chrX:1534204 . . 0 24 hm5C_associated_SNPs_55537 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:1534188-1534210
64251 chr2 9613090 9613090 1 + G T GBM 9613087 + 9613067 9613107 41 GTGAAGACGATGAATCCCTCCGAGAAATGGTGGAGCTGGCT GTGAAGACGATGAATCCCTCCGATAAATGGTGGAGCTGGCT < 41bp 0.794182749082869 0.438687857732848 0.37207353 0.16777426 prediction 0.588365498165738 Functional Loss - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9613087 chr2:9613090 stopgain 1.000 1 24 hm5C_associated_SNPs_55538 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:9613057-9613099
64251 chr12 56362585 56362585 1 + G T COAD 56362583 + 56362563 56362603 41 GCTATCTGTTCCAGCTGCTCCAGGGCCTAGCTTTCTGCCAT GCTATCTGTTCCAGCTGCTCCATGGCCTAGCTTTCTGCCAT < 41bp 0.7941623632405 0.460669151296284 0.94707036 0.59773266 prediction 0.588324726481 Functional Loss - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56362583 chr12:56362585 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_55540 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:56362565-56362601
64251 chr20 61453473 61453473 1 + G T LUAD 61453470 + 61453450 61453490 41 ACCCCCTCCCCAGGGACCTTCTGGACTCCCCGGCCTCCCTG ACCCCCTCCCCAGGGACCTTCTGTACTCCCCGGCCTCCCTG < 41bp 0.890139568244522 0.595978862862649 0.81951874 0.26568583 prediction 0.588321410763747 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61453470 chr20:61453473 nonsynonymous SNV 0.878 4 24 hm5C_associated_SNPs_55541 0 0 3 RPS3 POSTAR2 ENCODE chr20:61453462-61453486
64251 chr16 56871538 56871538 1 + G T LUAD 56871535 + 56871515 56871555 41 AGCAGAATGCTGACAAGGTACTGGAGCTGATGAACAAACTG AGCAGAATGCTGACAAGGTACTGTAGCTGATGAACAAACTG < 41bp 0.794124362797142 0.470310563235914 0.3564016 0.09276593 prediction 0.588248725594285 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56871535 chr16:56871538 stopgain 0.997 1 24 hm5C_associated_SNPs_55545 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:56871520-56871540
64251 chr1 117603146 117603146 1 + G T LIHC 117603144 + 117603124 117603164 41 GGAAAGAGCTTCTACGTGTGCCGGGCAGACACGTGCAGCTT GGAAAGAGCTTCTACGTGTGCCTGGCAGACACGTGCAGCTT < 41bp 0.794110459398281 0.450957514105643 0.5481944 0.09314042 prediction 0.588220918796561 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117603144 chr1:117603146 nonsynonymous SNV 0.940 0 23 hm5C_associated_SNPs_55550 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117603122-117603153
64251 chr17 38457815 38457815 1 + G T ESCA 38457812 + 38457792 38457832 41 CTTTCAGGGCTCTTGGAAGCCAGGGGCATTTTAGGATTAAA CTTTCAGGGCTCTTGGAAGCCAGTGGCATTTTAGGATTAAA < 41bp 0.794089893180337 0.42363509782392 0.8729224 0.18266097 prediction 0.588179786360673 Functional Loss - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38457812 chr17:38457815 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_55554 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:38457749-38457839
64251 chr19 49464114 49464114 1 + G T COAD 49464111 + 49464091 49464131 41 CTGATCAGAACCATCATGGGCTGGACATTGGACTTCCTCCG CTGATCAGAACCATCATGGGCTGTACATTGGACTTCCTCCG < 41bp 0.794088979470819 0.428884366452361 0.17746145 0.124889106 prediction 0.588177958941638 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464111 chr19:49464114 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_55555 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49464064-49464179
64251 chr17 46023331 46023331 1 + G T STAD 46023329 + 46023309 46023349 41 TTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGAT TTGGGGCTGTGGTCAGCCACCATAGTTCTGTGATCCCTGAT < 41bp 0.794080139924073 0.462215020495184 0.7278951 0.114103526 prediction 0.588160279848147 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46023329 chr17:46023331 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55557 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:46023318-46023341
64251 chr19 4164540 4164540 1 + G T OV 4164537 + 4164517 4164557 41 GGCCTCCTACCTCCTGCGACCTGGGGCTGGGCACTGTCAGG GGCCTCCTACCTCCTGCGACCTGTGGCTGGGCACTGTCAGG < 41bp 0.794076643066899 0.398305989272514 0.21424696 0.025143236 prediction 0.588153286133797 Functional Loss - CREB3L3 ENSG00000060566 CDS Human protein_coding chr19:4164537 chr19:4164540 nonsynonymous SNV 0.002 3 24 hm5C_associated_SNPs_55559 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:4164509-4164550
64251 chrX 15818048 15818048 1 + G T UCEC 15818045 + 15818025 15818065 41 CTTTTATTGAAGAACAACAACTAGAAGAAGAGAAGCTATTG CTTTTATTGAAGAACAACAACTATAAGAAGAGAAGCTATTG < 41bp 0.794053176509415 0.433234999054055 0.89483976 0.848898 prediction 0.588106353018831 Functional Loss - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15818045 chrX:15818048 stopgain 0.876 1 24 hm5C_associated_SNPs_55562 0 0 3 BUD13 POSTAR2 ENCODE chrX:15818046-15818073
64251 chr4 3447863 3447863 1 + G T CESC 3447860 + 3447840 3447880 41 CAGGCCTGCGGCAGGAGGCACAAGAAGAGGACGTTCCTGCG CAGGCCTGCGGCAGGAGGCACAATAAGAGGACGTTCCTGCG < 41bp 0.793995176714652 0.412048435140984 0.9193072 0.90363145 prediction 0.587990353429304 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3447860 chr4:3447863 nonsynonymous SNV 0.961 2 24 hm5C_associated_SNPs_55569 0 0 1 SRSF1 POSTAR2 ENCODE chr4:3447821-3447872
64251 chr1 46034841 46034841 1 + A C rs146516593 46034837 + 46034817 46034857 41 GTTTGACTTCACCTTTAGCCCAGAAGAGATGAAGCAGCTAA GTTTGACTTCACCTTTAGCCCAGACGAGATGAAGCAGCTAA < 41bp 0.793995059838862 0.405827170549038 0.24969059 0.18167606 prediction 0.587990119677724 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46034837 chr1:46034841 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_55570 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46034818-46034853
64251 chr7 129349027 129349027 1 + G T UCEC 129349025 + 129349005 129349045 41 TGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGTGA TGGTGGCCTGAAGATATCCCCTTGGCAAATGTCCGGAGTGA < 41bp 0.793937089295082 0.462903392077029 0.2162568 0.05798617 prediction 0.587874178590163 Functional Loss - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129349025 chr7:129349027 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55576 0 0 3 BUD13 POSTAR2 ENCODE chr7:129349026-129349072
64251 chr1 226016540 226016540 1 + G T DLBC 226016537 + 226016517 226016557 41 TGAAGATGGGTGGTGGGGGCCAGGCACGAGGTCCGCAGCCA TGAAGATGGGTGGTGGGGGCCAGTCACGAGGTCCGCAGCCA < 41bp 0.793917646144269 0.399571989133808 0.7843596 0.21519166 prediction 0.587835292288538 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016537 chr1:226016540 nonsynonymous SNV 0.005 4 24 hm5C_associated_SNPs_55577 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:226016537-226016595
64251 chr19 984368 984368 1 + G T LUSC 984365 + 984345 984385 41 GAAGGCAAGATGGCGGCGCCCATGGAGGTGGCCGTGTGTAC GAAGGCAAGATGGCGGCGCCCATTGAGGTGGCCGTGTGTAC < 41bp 0.793911625352258 0.437264000061336 0.3735152 0.12184343 prediction 0.587823250704515 Functional Loss - WDR18 ENSG00000065268 CDS Human protein_coding chr19:984365 chr19:984368 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_55578 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:984349-984378
64251 chr11 61539148 61539148 1 + G T SARC 61539145 + 61539125 61539165 41 TCCCCAGGGTCCGCTCTCCCCGGGCCCTGGTTCCTTGCCTC TCCCCAGGGTCCGCTCTCCCCGGTCCCTGGTTCCTTGCCTC < 41bp 0.793895504832045 0.398280638915325 0.9281467 0.39172602 prediction 0.587791009664091 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61539145 chr11:61539148 nonsynonymous SNV 0.048 4 24 hm5C_associated_SNPs_55580 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61539142-61539224
64251 chr16 8862807 8862807 1 + G T LUSC 8862804 + 8862784 8862824 41 AGTTTGTGAAAGAGAACCAACAGGAGGAGGCCCGCTGTCTG AGTTTGTGAAAGAGAACCAACAGTAGGAGGCCCGCTGTCTG < 41bp 0.895133708512 0.601251854361713 0.8516825 0.29104498 prediction 0.587763708300574 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8862804 chr16:8862807 stopgain 0.787 1 24 hm5C_associated_SNPs_55582 0 0 1 RPS3 POSTAR2 ENCODE chr16:8862788-8862829
64251 chr12 57905604 57905604 1 + G T UCEC 57905601 + 57905581 57905621 41 TCAAGCCACGCTGCATAACCCGAGACCTCAAATGGGGAACC TCAAGCCACGCTGCATAACCCGATACCTCAAATGGGGAACC < 41bp 0.793822994393122 0.441224074102965 0.9187781 0.8171277 prediction 0.587645988786245 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57905601 chr12:57905604 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_55587 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:57905590-57905628
64251 chr4 128804445 128804445 1 + G T LUAD 128804442 + 128804422 128804462 41 TAAGAAAGCCATGTACAAAGCAGGAATGGTACAGAGAGTCC TAAGAAAGCCATGTACAAAGCAGTAATGGTACAGAGAGTCC < 41bp 0.793797803806025 0.438659429858314 0.29696405 0.44657454 prediction 0.587595607612049 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128804442 chr4:128804445 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55590 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:128804437-128804462
64251 chr9 72874100 72874100 1 + G T SARC 72874098 + 72874078 72874118 41 CCCGAGCAAGAGGAAGAATTCGGCCCCGCAGCTGCCGCTGT CCCGAGCAAGAGGAAGAATTCGTCCCCGCAGCTGCCGCTGT < 41bp 0.845956411228914 0.55216227264157 0.9194293 0.55180126 prediction 0.587588277174688 Functional Loss - SMC5 ENSG00000198887 CDS Human protein_coding chr9:72874098 chr9:72874100 nonsynonymous SNV 0.053 0 23 hm5C_associated_SNPs_55591 0 0 4 GEMIN5 POSTAR2 ENCODE chr9:72874067-72874158
64251 chr2 190329915 190329915 1 + G T LUAD 190329913 + 190329893 190329933 41 GGCTTGCAACAGTGGAACAGCGGCAAGAAAAGGAAACTGAG GGCTTGCAACAGTGGAACAGCGTCAAGAAAAGGAAACTGAG < 41bp 0.803722357246749 0.509953059415376 0.36141235 0.2948167 prediction 0.587538595662746 Functional Loss - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190329913 chr2:190329915 synonymous SNV . 0 23 hm5C_associated_SNPs_55595 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190329896-190329962
64251 chr12 58121080 58121080 1 + G C rs115877550 58121079 + 58121059 58121099 41 AGGACTTCTGCCCCTACCCACGGGACCGTCTCAGGTTCGCA AGGACTTCTGCCCCTACCCACCGGACCGTCTCAGGTTCGCA < 41bp 0.794370025013377 0.500631066437183 0.6448804 0.046681494 prediction 0.587477917152389 Functional Loss - AGAP2-AS1 ENSG00000255737 CDS Human antisense chr12:58121079 chr12:58121080 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_55599 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr12:58121056-58121086
64251 chr9 115580039 115580039 1 + G T UCEC 115580036 + 115580016 115580056 41 ATTCTGTTCGTCGAAGATACCAGGATTTTGACTGGTTGAGG ATTCTGTTCGTCGAAGATACCAGTATTTTGACTGGTTGAGG < 41bp 0.887866849544413 0.594140853203049 0.82950205 0.29680628 prediction 0.587451992682726 Functional Loss - SNX30 ENSG00000148158 CDS Human protein_coding chr9:115580036 chr9:115580039 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55602 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:115580027-115580052
64251 chr1 26607370 26607370 1 + G T UCEC 26607368 + 26607348 26607388 41 GGATGAGATGCGAGCCTTGGCAGGCAACCCCAAGGCCACCC GGATGAGATGCGAGCCTTGGCATGCAACCCCAAGGCCACCC < 41bp 0.851144429424114 0.557435351515175 0.90307164 0.28543466 prediction 0.587418155817877 Functional Loss - SH3BGRL3 ENSG00000142669 CDS Human protein_coding chr1:26607368 chr1:26607370 nonsynonymous SNV 0.958 4 23 hm5C_associated_SNPs_55608 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26607354-26607378
64251 chr14 20824773 20824773 1 + G T UCEC 20824770 + 20824750 20824790 41 ATGCTTCTATGGCATGGTTCCAGGATGAGTAACTGGGTGGG ATGCTTCTATGGCATGGTTCCAGTATGAGTAACTGGGTGGG < 41bp 0.885485880659977 0.591780614350928 0.88745284 0.24682954 prediction 0.587410532618097 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20824770 chr14:20824773 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_55609 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:20824758-20824787
64251 chr22 18609668 18609668 1 + G T GBM 18609665 + 18609645 18609685 41 CCAGATGGTGAAGTGCGACCCGAGACATGGCAAGTACATGG CCAGATGGTGAAGTGCGACCCGATACATGGCAAGTACATGG < 41bp 0.886569178845842 0.592865570513949 0.7458181 0.22997084 prediction 0.587407216663786 Functional Loss - TUBA8 ENSG00000183785 CDS Human protein_coding chr22:18609665 chr22:18609668 nonsynonymous SNV 0.163 5 24 hm5C_associated_SNPs_55611 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:18609668-18609692
64251 chr7 151046260 151046260 1 + A T PRAD 151046256 + 151046236 151046276 41 CAAGGCAATTGAGCGTGGAACAGGAAATGACAATTATAGAA CAAGGCAATTGAGCGTGGAACAGGTAATGACAATTATAGAA < 41bp 0.795754401311959 0.502080452309255 0.36721462 0.79466844 prediction 0.587347898005409 Functional Loss - NUB1 ENSG00000013374 CDS Human protein_coding chr7:151046256 chr7:151046260 synonymous SNV . 0 25 hm5C_associated_SNPs_55612 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr7:151046178-151046264
64251 chr6 150111148 150111148 1 + A T LUAD 150111144 + 150111124 150111164 41 TGCATGAAGGAGCTAAAGCTCTTGATGTAGGATCTGGAAGT TGCATGAAGGAGCTAAAGCTCTTGTTGTAGGATCTGGAAGT < 41bp 0.793662529867596 0.485078167274919 0.09310123 0.107509434 prediction 0.587325059735193 Functional Loss - PCMT1 ENSG00000120265 CDS Human protein_coding chr6:150111144 chr6:150111148 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_55613 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:150111096-150111187
64251 chr19 14028954 14028954 1 + G C LUSC 14028953 + 14028933 14028973 41 TACAAGCTGGCTGCCCTCCACGCCAAGCAGCAGGGAGATAC TACAAGCTGGCTGCCCTCCACCCCAAGCAGCAGGGAGATAC < 41bp 0.807478653906751 0.513832988474874 0.52199477 0.18709475 prediction 0.587291330863753 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14028953 chr19:14028954 nonsynonymous SNV 0.908 3 22 hm5C_associated_SNPs_55616 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:14028940-14028960
64251 chr2 202131427 202131427 1 + A C COAD 202131423 + 202131403 202131443 41 TGCTCTTCCGAATTAATAGACTGGATTTGCTGATTACCTAC TGCTCTTCCGAATTAATAGACTGGCTTTGCTGATTACCTAC < 41bp 0.793635727654493 0.453995114589859 0.5015849 0.28242046 prediction 0.587271455308985 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131423 chr2:202131427 nonsynonymous SNV 0.057 4 25 hm5C_associated_SNPs_55617 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:202131416-202131436
64251 chr17 40725136 40725136 1 - T G THCA 40725140 - 40725120 40725160 41 CTTGAAGGATACCCCAAGAGCAAGAAGCAGTTCTTTGTAAG CTTGAAGGATACCCCAAGAGCAAGCAGCAGTTCTTTGTAAG < 41bp 0.793624711651313 0.404585991085424 0.7596314 0.3692853 prediction 0.587249423302627 Functional Loss - PSMC3IP ENSG00000131470 CDS Human protein_coding chr17:40725140 chr17:40725136 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_55620 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40725120-40725140
64251 chr7 141478744 141478744 1 + G T LUAD 141478742 + 141478722 141478762 41 GCCTGTACATCACGCTTAGCCAGGCATCACCTTTTCCTGAA GCCTGTACATCACGCTTAGCCATGCATCACCTTTTCCTGAA < 41bp 0.830928304479329 0.537322432539307 0.8923701 0.20710528 prediction 0.587211743880043 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478742 chr7:141478744 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_55623 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:141478737-141478783
64251 chr8 125464052 125464052 1 + G T COAD 125464050 + 125464030 125464070 41 CAAATACACTTTGGAGATAACAGAAAACTGAAGCTCTCAAA CAAATACACTTTGGAGATAACATAAAACTGAAGCTCTCAAA < 41bp 0.793603976878799 0.479280894548105 0.042856157 0.038367957 prediction 0.587207953757598 Functional Loss - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464050 chr8:125464052 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_55625 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:125464040-125464060
64251 chr3 101572000 101572000 1 + G T LUAD 101571998 + 101571978 101572018 41 TTCATCTCAATGAACCCAAACAGGAGAGCAGTGCTGATCTG TTCATCTCAATGAACCCAAACATGAGAGCAGTGCTGATCTG < 41bp 0.830783233213533 0.537196116123383 0.6908367 0.10218716 prediction 0.587174234180301 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101571998 chr3:101572000 nonsynonymous SNV 0.101 0 23 hm5C_associated_SNPs_55626 0 0 2 GRWD1 POSTAR2 ENCODE chr3:101571932-101572011
64251 chr1 171765854 171765854 1 + G T LUSC 171765851 + 171765831 171765871 41 CCTGGGAGGGGTTGGGATGACACGTATGTCTTGTCAGATAT CCTGGGAGGGGTTGGGATGACACTTATGTCTTGTCAGATAT < 41bp 0.793546474027614 0.435805829963555 0.5528991 0.4011308 prediction 0.587092948055227 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765851 chr1:171765854 synonymous SNV . 0 24 hm5C_associated_SNPs_55629 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:171765840-171765860
64251 chr1 65142667 65142667 1 + G T UCEC 65142665 + 65142645 65142685 41 GCTCTTCACCAGTGTGTCAACAGCAGGTGCAGTCAGAGGCT GCTCTTCACCAGTGTGTCAACATCAGGTGCAGTCAGAGGCT < 41bp 0.793536435708508 0.472275240742753 0.27339363 0.1554865 prediction 0.587072871417016 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65142665 chr1:65142667 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_55631 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr1:65142645-65142670
64251 chr4 184931158 184931158 1 + G T HNSC 184931156 + 184931136 184931176 41 ACCCTTCCGACGGTTCACATCTGGATATCCCAGCTGAAAGA ACCCTTCCGACGGTTCACATCTTGATATCCCAGCTGAAAGA < 41bp 0.793532116400484 0.471588313237395 0.60367924 0.11223501 prediction 0.587064232800968 Functional Loss - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184931156 chr4:184931158 synonymous SNV . 0 23 hm5C_associated_SNPs_55633 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:184931149-184931171
64251 chr4 119621735 119621735 1 + G T SARC 119621733 + 119621713 119621753 41 GTTAGAAATTGATGAGATTGCAGCACCTCGATCATTTATTT GTTAGAAATTGATGAGATTGCATCACCTCGATCATTTATTT < 41bp 0.824332251964756 0.530807046028339 0.18672135 0.0484657 prediction 0.587050411872834 Functional Loss - METTL14 ENSG00000145388 CDS Human protein_coding chr4:119621733 chr4:119621735 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_55634 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:119621702-119621745
64251 chr19 57956231 57956231 1 + A T GBM 57956227 + 57956207 57956247 41 CCTTCCTTACACAGGCTCATCTAGATGGTCACCAGAAAATC CCTTCCTTACACAGGCTCATCTAGTTGGTCACCAGAAAATC < 41bp 0.793515871299326 0.481210505585567 0.20756069 0.1502308 prediction 0.587031742598652 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57956227 chr19:57956231 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_55636 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:57956222-57956253
64251 chr8 145748539 145748539 1 + G T SARC 145748537 + 145748517 145748557 41 TTTCTCCAGGTCACCAATGGCTGCGGGTAGCCGGAGGCTTG TTTCTCCAGGTCACCAATGGCTTCGGGTAGCCGGAGGCTTG < 41bp 0.7970444687957 0.503544452054837 0.69357884 0.2968812 prediction 0.587000033481726 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145748537 chr8:145748539 nonsynonymous SNV 0.985 0 23 hm5C_associated_SNPs_55638 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:145748526-145748546
64251 chr11 63884348 63884348 1 + G T SARC 63884346 + 63884326 63884366 41 TGCCGCACACGCTGGAGGAGCTGCGGCTGGATGACAACCGC TGCCGCACACGCTGGAGGAGCTTCGGCTGGATGACAACCGC < 41bp 0.793495353885151 0.461610414833946 0.53982615 0.64268935 prediction 0.586990707770302 Functional Loss - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63884346 chr11:63884348 synonymous SNV . 0 23 hm5C_associated_SNPs_55639 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:63884333-63884385
64251 chr15 91292789 91292789 1 + G T UCEC 91292787 + 91292767 91292807 41 TTAAAAATGCTCCAGCAGGACAGGAAACACAGAGAGGTGGA TTAAAAATGCTCCAGCAGGACATGAAACACAGAGAGGTGGA < 41bp 0.793490672042167 0.490967463465639 0.15254429 0.07687241 prediction 0.586981344084335 Functional Loss - BLM ENSG00000197299 CDS Human protein_coding chr15:91292787 chr15:91292789 nonsynonymous SNV 0.010 1 23 hm5C_associated_SNPs_55641 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91292607-91292789
64251 chr1 45479664 45479664 1 + G T UCEC 45479662 + 45479642 45479682 41 GCTGGCTCTATCAGAGACCTCAGGCTAGTCACCAGCTGCTT GCTGGCTCTATCAGAGACCTCATGCTAGTCACCAGCTGCTT < 41bp 0.793466622471549 0.464244456036605 0.77763814 0.117669165 prediction 0.586933244943098 Functional Loss - UROD ENSG00000126088 CDS Human protein_coding chr1:45479662 chr1:45479664 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55644 0 0 2 RPS3 POSTAR2 ENCODE chr1:45479600-45479673
64251 chr6 27833365 27833365 1 + G T LUSC 27833363 + 27833343 27833383 41 GCCCGCGACAACAAGAAGACCCGCATTATCCCGCGCCACTT GCCCGCGACAACAAGAAGACCCTCATTATCCCGCGCCACTT < 41bp 0.827667312202168 0.534202695680305 0.39161453 0.186513 prediction 0.586929233043725 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833363 chr6:27833365 nonsynonymous SNV 0.969 0 23 hm5C_associated_SNPs_55645 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27833358-27833379
64251 chr17 21731582 21731582 1 + G T LUSC 21731580 + 21731560 21731600 41 GCATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTG GCATCCAGAAAGAGTCGACCCTTCACCTGGTCCTGCGCCTG < 41bp 0.793436457009736 0.481292576435174 0.32374632 0.16286024 prediction 0.586872914019472 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731580 chr17:21731582 synonymous SNV . 0 23 hm5C_associated_SNPs_55653 0 0 2 IGF2BP2 POSTAR2 ENCODE chr17:21731576-21731712
64251 chr20 35812693 35812693 1 + G T OV 35812690 + 35812670 35812710 41 TGGAGAGACTAAAAGCCTCGCTGGATCGCCCTTTCACAAAT TGGAGAGACTAAAAGCCTCGCTGTATCGCCCTTTCACAAAT < 41bp 0.887377315478345 0.593980613422515 0.037782013 0.011879951 prediction 0.586793404111659 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35812690 chr20:35812693 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_55658 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:35812680-35812740
64251 chr15 39875873 39875873 1 + G T UCEC 39875871 + 39875851 39875891 41 ACCACACCAGAAGACATCCTCAGGAACAAAGGCTGCTCCAG ACCACACCAGAAGACATCCTCATGAACAAAGGCTGCTCCAG < 41bp 0.854965385291644 0.561614480501382 0.92861533 0.13456401 prediction 0.586701809580525 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39875871 chr15:39875873 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55666 0 0 2 DDX6 POSTAR2 ENCODE chr15:39875871-39875894
64251 chrX 129546780 129546780 1 + G T LGG 129546777 + 129546757 129546797 41 CATAAAAGGGCCCGACGCTCCCGGGAGCGGGAGTCTTCGAA CATAAAAGGGCCCGACGCTCCCGTGAGCGGGAGTCTTCGAA < 41bp 0.793328909913591 0.416233079938546 0.9187426 0.49957004 prediction 0.586657819827181 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546777 chrX:129546780 synonymous SNV . 0 24 hm5C_associated_SNPs_55669 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:129546684-129546848
64251 chr11 75511446 75511446 1 + G T UCEC 75511443 + 75511423 75511463 41 AGCTGGAGCACCCAACCCAGCAAGACATCGACCTGTACCAC AGCTGGAGCACCCAACCCAGCAATACATCGACCTGTACCAC < 41bp 0.793297641956221 0.41405999807015 0.7463097 0.3974319 prediction 0.586595283912441 Functional Loss - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75511443 chr11:75511446 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_55671 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:75511444-75511477
64251 chr4 83372248 83372248 1 + G T BLCA 83372245 + 83372225 83372265 41 TGTTCCTATCCCTGCAGCATCTGGGAATGGAGTGGATGATC TGTTCCTATCCCTGCAGCATCTGTGAATGGAGTGGATGATC < 41bp 0.890992450690702 0.597714356747395 0.59566665 0.13280421 prediction 0.586556187886613 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83372245 chr4:83372248 nonsynonymous SNV 0.070 1 24 hm5C_associated_SNPs_55673 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:83372217-83372259
64251 chr4 1369876 1369876 1 + G T UCEC 1369874 + 1369854 1369894 41 CCCAGAAGCTGGCAGCAGAGCGGGCCCGGGCGCCTGTGGTG CCCAGAAGCTGGCAGCAGAGCGTGCCCGGGCGCCTGTGGTG < 41bp 0.86563502935689 0.572384084178091 0.8623383 0.18680426 prediction 0.586501890357599 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1369874 chr4:1369876 synonymous SNV . 0 23 hm5C_associated_SNPs_55678 0 0 3 FASTKD2 POSTAR2 ENCODE chr4:1369855-1369906
64251 chr17 79639721 79639721 1 + A C rs373358953 79639717 + 79639697 79639737 41 ACCTCACTTCCCGGAAGAAGCCAGAGCCGCAGCTGTGATGG ACCTCACTTCCCGGAAGAAGCCAGCGCCGCAGCTGTGATGG < 41bp 0.869685932552428 0.576491793444914 0.58318484 0.28219804 prediction 0.586388278215028 Functional Loss - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79639717 chr17:79639721 nonsynonymous SNV 0.006 2 25 hm5C_associated_SNPs_55682 0 0 1 UCHL5 POSTAR2 ENCODE chr17:79639719-79639754
64251 chr19 10823940 10823940 1 + G T rs11672431 10823938 + 10823918 10823958 41 TGGCCTCTGTGGGAATCACACTGGGCTGACCTGGCATTGGG TGGCCTCTGTGGGAATCACACTTGGCTGACCTGGCATTGGG < 41bp 0.843980546081435 0.550790160030303 0.90209186 0.4395578 prediction 0.586380772102262 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823938 chr19:10823940 synonymous SNV . 0 23 hm5C_associated_SNPs_55683 0 0 10 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr19:10823940-10823960
64251 chr11 62545591 62545591 1 + G T SARC 62545589 + 62545569 62545609 41 CCCCAAAGGCTGTGCTGAGACAGCTGTCAGAGGTGGCTGCC CCCCAAAGGCTGTGCTGAGACATCTGTCAGAGGTGGCTGCC < 41bp 0.793190024671791 0.456168126683539 0.49983037 0.19254589 prediction 0.586380049343583 Functional Loss - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62545589 chr11:62545591 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_55684 0 0 1 PPIG POSTAR2 ENCODE chr11:62545527-62545602
64251 chr15 43690269 43690269 1 + G T THCA 43690266 + 43690246 43690286 41 TCAGGCAAGAGAAGGGCCTTCTCGGGAAACTTCTCCCCGGG TCAGGCAAGAGAAGGGCCTTCTCTGGAAACTTCTCCCCGGG < 41bp 0.892365716154413 0.599204068954857 0.68771124 0.54409075 prediction 0.58632329439911 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43690266 chr15:43690269 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_55689 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:43690251-43690277
64251 chr2 10563183 10563183 1 + G T CESC 10563180 + 10563160 10563200 41 ACCCCGGAGAAGCGCACAGACAAGATCTTCAGGCAGATGGA ACCCCGGAGAAGCGCACAGACAATATCTTCAGGCAGATGGA < 41bp 0.793155502239963 0.41701568698141 0.026054412 0.009260595 prediction 0.586311004479926 Functional Loss - HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10563180 chr2:10563183 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55692 0 0 3 BUD13 POSTAR2 ENCODE chr2:10563056-10563190
64251 chr3 141161928 141161928 1 + G T SARC 141161926 + 141161906 141161946 41 TCTTCCGTAGCTGAAGCTTACAGAAGTCAGCCTGTACGTGA TCTTCCGTAGCTGAAGCTTACATAAGTCAGCCTGTACGTGA < 41bp 0.79313202074987 0.467253936205362 0.3715784 0.0967516 prediction 0.586264041499741 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161926 chr3:141161928 nonsynonymous SNV 0.740 1 23 hm5C_associated_SNPs_55694 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:141161918-141161939
64251 chr19 37211211 37211211 1 + G T LUSC 37211209 + 37211189 37211229 41 TCTACATCAGAGAATTCATACAGGGGAGAAACCCTATGTTT TCTACATCAGAGAATTCATACATGGGAGAAACCCTATGTTT < 41bp 0.793087819428507 0.477147583331692 0.4176823 0.13027254 prediction 0.586175638857015 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37211209 chr19:37211211 nonsynonymous SNV 0.840 4 23 hm5C_associated_SNPs_55701 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:37211175-37211213
64251 chr12 69127282 69127282 1 + G T UCEC 69127279 + 69127259 69127299 41 AAGTATTTGTGAAAATTCCTCAGGATTCTATAGCAGAAATC AAGTATTTGTGAAAATTCCTCAGTATTCTATAGCAGAAATC < 41bp 0.793082023708564 0.431681155165386 0.68273175 0.12657335 prediction 0.586164047417127 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69127279 chr12:69127282 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55702 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69127245-69127283
64251 chr1 93599699 93599699 1 + G T THCA 93599696 + 93599676 93599716 41 AATACCTCAGATGTGGATTTCACGGGTGCTTCCAGTGCAAA AATACCTCAGATGTGGATTTCACTGGTGCTTCCAGTGCAAA < 41bp 0.793073989921293 0.432159147582754 0.74952245 0.12795061 prediction 0.586147979842586 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93599696 chr1:93599699 synonymous SNV . 0 24 hm5C_associated_SNPs_55703 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:93599676-93599712
64251 chr16 88925152 88925152 1 + G T UCEC 88925149 + 88925129 88925169 41 ATGGGGAAGGCCCTGGTCGACCAGAGGGAGCTGTACCTGGG ATGGGGAAGGCCCTGGTCGACCATAGGGAGCTGTACCTGGG < 41bp 0.880437261585397 0.587369368968306 0.82548475 0.22548193 prediction 0.586135785234184 Functional Loss - TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88925149 chr16:88925152 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_55705 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr16:88925128-88925152
64251 chr1 117617619 117617619 1 + G T CESC 117617617 + 117617597 117617637 41 AAGAATCAAGAACCAGCTCTCTGGAAACAGCTCATCAAAGG AAGAATCAAGAACCAGCTCTCTTGAAACAGCTCATCAAAGG < 41bp 0.821099315536772 0.528042661018512 0.27952754 0.12779108 prediction 0.58611330903652 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117617617 chr1:117617619 nonsynonymous SNV 0.468 2 23 hm5C_associated_SNPs_55706 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:117617601-117617636
64251 chr17 33289497 33289497 1 + G T LUAD 33289494 + 33289474 33289514 41 GAGGAGGGACGGTTGGACCGCCAGATTGGGGAGATCGATGA GAGGAGGGACGGTTGGACCGCCATATTGGGGAGATCGATGA < 41bp 0.793046535541315 0.43395334189682 0.8921795 0.905206 prediction 0.58609307108263 Functional Loss - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33289494 chr17:33289497 nonsynonymous SNV 0.879 4 24 hm5C_associated_SNPs_55709 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:33289465-33289541
64251 chr3 122283386 122283386 1 + G T SARC 122283384 + 122283364 122283404 41 CAGAGCTCTAAGTCCTCGGGCGGCGGGGAGTGCACGGTCAG CAGAGCTCTAAGTCCTCGGGCGTCGGGGAGTGCACGGTCAG < 41bp 0.793038444303503 0.455320721439318 0.8770596 0.47571298 prediction 0.586076888607007 Functional Loss - DTX3L ENSG00000163840 CDS Human protein_coding chr3:122283384 chr3:122283386 nonsynonymous SNV 0.075 4 23 hm5C_associated_SNPs_55710 0 0 1 DDX3X POSTAR2 ENCODE chr3:122283221-122283444
64251 chr8 30977861 30977861 1 + G T HNSC 30977858 + 30977838 30977878 41 AGGACATGGAATCATATTATCAGGAGATTGGTAGAGCTGGT AGGACATGGAATCATATTATCAGTAGATTGGTAGAGCTGGT < 41bp 0.793037529898542 0.425345686350668 0.9187075 0.29996967 prediction 0.586075059797084 Functional Loss - WRN ENSG00000165392 CDS Human protein_coding chr8:30977858 chr8:30977861 stopgain 1.000 1 24 hm5C_associated_SNPs_55711 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr8:30977846-30977873
64251 chr12 54422634 54422634 1 + G T HNSC 54422632 + 54422612 54422652 41 GATTTTAGTTCTGAGCAGGGCAGGACTGCGCCCCAGGACCA GATTTTAGTTCTGAGCAGGGCATGACTGCGCCCCAGGACCA < 41bp 0.809825344370059 0.516790090740529 0.5018527 0.17032069 prediction 0.58607050725906 Functional Loss - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54422632 chr12:54422634 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55712 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:54422617-54422649
64251 chr16 20787371 20787371 1 + G T PRAD 20787369 + 20787349 20787389 41 AAATGTGGCCTGTCTGCGAACAGGTTAGTAATGTTTGCTTT AAATGTGGCCTGTCTGCGAACATGTTAGTAATGTTTGCTTT < 41bp 0.792998665288287 0.461902209081599 0.50282055 0.2074764 prediction 0.585997330576575 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787369 chr16:20787371 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55716 0 0 7 EFTUD2 POSTAR2 ENCODE chr16:20787363-20787444
64251 chrX 44928937 44928937 1 + G T GBM 44928935 + 44928915 44928955 41 CTGGCTCTGGTATTCAGAATCAGAACGGACATCCCACCCTG CTGGCTCTGGTATTCAGAATCATAACGGACATCCCACCCTG < 41bp 0.792994247086367 0.476137502154115 0.9331899 0.38526973 prediction 0.585988494172734 Functional Loss - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44928935 chrX:44928937 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55719 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:44928927-44928952
64251 chr7 148484124 148484124 1 + A C STAD 148484120 + 148484100 148484140 41 TAGAAGACAAAGACGTATTTCAGAAGTTCTATGCGAAGATG TAGAAGACAAAGACGTATTTCAGACGTTCTATGCGAAGATG < 41bp 0.792953843988642 0.397590244517444 0.16752478 0.20229632 prediction 0.585907687977283 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148484120 chr7:148484124 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_55724 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:148484110-148484131
64251 chr6 31584147 31584147 1 + G T LUSC 31584144 + 31584124 31584164 41 TCATGTCCCTGAAACGAATGCTGGAGAAACTTGGAGTCCCC TCATGTCCCTGAAACGAATGCTGTAGAAACTTGGAGTCCCC < 41bp 0.818278181139845 0.525396824170939 0.6452117 0.31032467 prediction 0.585762713937812 Functional Loss - AIF1 ENSG00000204472 CDS Human protein_coding chr6:31584144 chr6:31584147 stopgain 1.000 1 24 hm5C_associated_SNPs_55734 0 0 1 YBX3 POSTAR2 ENCODE chr6:31584120-31584163
64251 chr17 37819139 37819139 1 + G T SARC 37819137 + 37819117 37819157 41 TTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGC TTTCACCTGCGACAGCGCATCATCGAGCTGGGGGCCCGGGC < 41bp 0.836330751086614 0.5434545905171 0.45443538 0.30534643 prediction 0.585752321139028 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819137 chr17:37819139 nonsynonymous SNV 0.072 0 23 hm5C_associated_SNPs_55736 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:37819139-37819140
64251 chr2 28634797 28634797 1 + G T COAD 28634794 + 28634774 28634814 41 ACATCCCTCTCTTTCCGTGGCAGGAGACAGAGGAGCTGGAG ACATCCCTCTCTTTCCGTGGCAGTAGACAGAGGAGCTGGAG < 41bp 0.792875127478598 0.410585253198304 0.86425996 0.46406674 prediction 0.585750254957196 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28634794 chr2:28634797 stopgain 0.997 1 24 hm5C_associated_SNPs_55737 0 0 4 BUD13 POSTAR2 ENCODE chr2:28634751-28634829
64251 chr17 6023843 6023843 1 + G T LUSC 6023841 + 6023821 6023861 41 ACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCAC ACAAGGAGGGCAGCTTCCGGCGTCGCGGCCGGCGCTCCCAC < 41bp 0.83882989102809 0.545973180538281 0.90259504 0.78916633 prediction 0.585713420979618 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023841 chr17:6023843 synonymous SNV . 0 23 hm5C_associated_SNPs_55739 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6023833-6023862
64251 chr7 50444361 50444361 1 + G T ACC 50444358 + 50444338 50444378 41 GAGAAAATGAATGGCTCCCACAGGGACCAAGGCAGCTCGGC GAGAAAATGAATGGCTCCCACAGTGACCAAGGCAGCTCGGC < 41bp 0.792831525261364 0.462942916395325 0.88228416 0.29820305 prediction 0.585663050522728 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50444358 chr7:50444361 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_55745 0 0 5 DDX24 POSTAR2 ENCODE chr7:50444261-50444365
64251 chr5 53814547 53814547 1 + G T LUAD 53814544 + 53814524 53814564 41 GCGTCAGGCTTCGTGAAGGACGGGGACAAGCTGTGCGTGGT GCGTCAGGCTTCGTGAAGGACGGTGACAAGCTGTGCGTGGT < 41bp 0.892203098483976 0.599415278787118 0.90498626 0.83612597 prediction 0.585575639393716 Functional Loss - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53814544 chr5:53814547 synonymous SNV . 0 24 hm5C_associated_SNPs_55750 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:53814528-53814550
64251 chr19 57722984 57722984 1 + G T PAAD 57722982 + 57722962 57723002 41 GTGTGTGTTCAAGGATTGGACAGGAGCAAGTCTCTCCAGGA GTGTGTGTTCAAGGATTGGACATGAGCAAGTCTCTCCAGGA < 41bp 0.821085790531173 0.528349702177593 0.80606437 0.08962819 prediction 0.58547217670716 Functional Loss - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57722982 chr19:57722984 nonsynonymous SNV 0.032 0 23 hm5C_associated_SNPs_55755 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57722947-57723003
64251 chrX 47085748 47085748 1 + A C UCEC 47085744 + 47085724 47085764 41 AGAAGGTGCTACACCGAGACCTCAAGCCCCAGAACCTGCTC AGAAGGTGCTACACCGAGACCTCACGCCCCAGAACCTGCTC < 41bp 0.792721057247914 0.365144638790326 0.34276414 0.13459644 prediction 0.585442114495827 Functional Loss - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47085744 chrX:47085748 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_55758 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:47085730-47085765
64251 chr16 29815333 29815333 1 + G T UCEC 29815331 + 29815311 29815351 41 ACTTTCAGTTCAGGAGCAGGCAGCATCCCCAAATGCCGAGA ACTTTCAGTTCAGGAGCAGGCATCATCCCCAAATGCCGAGA < 41bp 0.792672919604183 0.456858655322767 0.11342728 0.070854545 prediction 0.585345839208366 Functional Loss - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29815331 chr16:29815333 nonsynonymous SNV 0.034 0 23 hm5C_associated_SNPs_55765 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221663 chr16:29815320-29815360
64251 chr15 92690292 92690292 1 + G T LUSC 92690290 + 92690270 92690310 41 TCCTGGAAAATGCCCCAGTCCTGGGTGCCAAGAGGCCTTCC TCCTGGAAAATGCCCCAGTCCTTGGTGCCAAGAGGCCTTCC < 41bp 0.792652836212749 0.469658812806112 0.36397207 0.15364882 prediction 0.585305672425498 Functional Loss - SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92690290 chr15:92690292 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_55767 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:92690287-92690344
64251 chr9 130566689 130566689 1 + G T HNSC 130566687 + 130566667 130566707 41 TGTACCTGGCACGGAGTGGGCTGCAGGTAAGGTAGAGAGGG TGTACCTGGCACGGAGTGGGCTTCAGGTAAGGTAGAGAGGG < 41bp 0.826803706904111 0.534160095342201 0.11945948 0.05348614 prediction 0.585287223123821 Functional Loss - FPGS ENSG00000136877 CDS Human protein_coding chr9:130566687 chr9:130566689 synonymous SNV . 0 23 hm5C_associated_SNPs_55768 0 0 3 DDX24 POSTAR2 ENCODE chr9:130566672-130566693
64251 chr1 26153187 26153187 1 + G T SARC 26153185 + 26153165 26153205 41 GCAATGCCTCTGTTCCCAACCTGCGTGGGTCCGAGGAGAGG GCAATGCCTCTGTTCCCAACCTTCGTGGGTCCGAGGAGAGG < 41bp 0.792590667271356 0.486154414191457 0.23673904 0.18517736 prediction 0.585181334542712 Functional Loss - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26153185 chr1:26153187 synonymous SNV . 0 23 hm5C_associated_SNPs_55774 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:26153176-26153194
64251 chr22 39884738 39884738 1 + G T LUAD 39884735 + 39884715 39884755 41 ATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCGACGGCAC ATCCGCGGCCTGATCCGCACCGGTGGCTGGTTCGACGGCAC < 41bp 0.895128266799261 0.602539243926997 0.90326864 0.32142147 prediction 0.58517804574453 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884735 chr22:39884738 synonymous SNV . 0 24 hm5C_associated_SNPs_55775 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:39884738-39884739
64251 chr4 95497177 95497177 1 + G T UCEC 95497175 + 95497155 95497195 41 GATCCCAGGGTGACAGTAAACAGCAAAATGGGTAGGTGGCT GATCCCAGGGTGACAGTAAACATCAAAATGGGTAGGTGGCT < 41bp 0.792558559864642 0.497263320906668 0.21566889 0.11254078 prediction 0.585117119729285 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95497175 chr4:95497177 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_55778 0 0 2 BUD13 POSTAR2 ENCODE chr4:95497113-95497196
64251 chr12 27933771 27933771 1 + G T LUAD 27933768 + 27933748 27933788 41 GCAAGCCCCAGTTCCACCTCCTGGGGTCTCCTCCCCAAGCT GCAAGCCCCAGTTCCACCTCCTGTGGTCTCCTCCCCAAGCT < 41bp 0.894242938428049 0.601702132473549 0.88358486 0.2942679 prediction 0.585081611908999 Functional Loss - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933768 chr12:27933771 nonsynonymous SNV 0.175 1 24 hm5C_associated_SNPs_55782 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:27933758-27933786
64251 chr19 16213151 16213151 1 + G T rs181426301 16213148 + 16213128 16213168 41 GACAGAGTGAGACTCCATCTCAAGAAAAAATAAAAATAAAG GACAGAGTGAGACTCCATCTCAATAAAAAATAAAAATAAAG < 41bp 0.792516880697086 0.454942630735821 0.9274493 0.8159115 prediction 0.585033761394173 Functional Loss - TPM4 ENSG00000167460 UTR3 Human protein_coding chr19:16213148 chr19:16213151 . . 0 24 hm5C_associated_SNPs_55786 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr19:16213134-16213151
64251 chr1 107600087 107600087 1 + G T LUAD 107600085 + 107600065 107600105 41 GCGAGGACGTGCTGGCCCGGCCGCAGCGCTTTGCTCAGCTA GCGAGGACGTGCTGGCCCGGCCTCAGCGCTTTGCTCAGCTA < 41bp 0.836174041681035 0.543758423101024 0.24284694 0.17266858 prediction 0.584831237160022 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600085 chr1:107600087 synonymous SNV . 0 23 hm5C_associated_SNPs_55794 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:107600067-107600090
64251 chr10 7780676 7780676 1 + G T UCEC 7780673 + 7780653 7780693 41 CCGTGATCTCCATGCTGGCACAAGGATCTCAGGTGCTAGAG CCGTGATCTCCATGCTGGCACAATGATCTCAGGTGCTAGAG < 41bp 0.792412704662142 0.399356292834144 0.21937892 0.01740715 prediction 0.584825409324285 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7780673 chr10:7780676 stopgain 0.005 0 24 hm5C_associated_SNPs_55795 0 0 5 LIN28B POSTAR2 ENCODE chr10:7780669-7780714
64251 chrX 100667035 100667035 1 + G T LGG 100667032 + 100667012 100667052 41 GGTGAAGGTCAGGGGCCTACCCTGGTCCTGCTCAGCCGATG GGTGAAGGTCAGGGGCCTACCCTTGTCCTGCTCAGCCGATG < 41bp 0.792404919894273 0.425246854683322 0.15371469 0.051765233 prediction 0.584809839788547 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667032 chrX:100667035 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55797 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chrX:100667023-100667057
64251 chr1 10190617 10190617 1 + G T BLCA 10190615 + 10190595 10190635 41 GTCCTGGCTGTGGGCGGGAGCTGCAGAGACTCTCTTACTTA GTCCTGGCTGTGGGCGGGAGCTTCAGAGACTCTCTTACTTA < 41bp 0.827118467943753 0.534721183307117 0.812955 0.74035203 prediction 0.584794569273273 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10190615 chr1:10190617 synonymous SNV . 0 23 hm5C_associated_SNPs_55798 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:10190592-10190633
64251 chr11 118527482 118527482 1 + G T LUAD 118527479 + 118527459 118527499 41 TCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCAC TCTGCAGAGGCCATGCGTATCTGTATGGATGTCATTGTCAC < 41bp 0.86098159265778 0.568587675545156 0.42022926 0.1483613 prediction 0.584787834225247 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118527479 chr11:118527482 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_55799 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118527465-118527506
64251 chr2 219268075 219268075 1 + G T UCEC 219268072 + 219268052 219268092 41 AGGACCTGAGCCGGTTGGGTCGAGACCTGCGGCGGGTGCTC AGGACCTGAGCCGGTTGGGTCGATACCTGCGGCGGGTGCTC < 41bp 0.792348035508945 0.423831682963239 0.87339246 0.4381505 prediction 0.584696071017891 Functional Loss - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219268072 chr2:219268075 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55802 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:219268045-219268089
64251 chr12 121125323 121125323 1 + G T LUAD 121125321 + 121125301 121125341 41 CGCAAGGACCCTTTGGAAGGCCGGGTGGGCCGAGGTGAGAG CGCAAGGACCCTTTGGAAGGCCTGGTGGGCCGAGGTGAGAG < 41bp 0.792323668457252 0.463052882263101 0.39608917 0.14384505 prediction 0.584647336914505 Functional Loss - MLEC ENSG00000110917 CDS Human protein_coding chr12:121125321 chr12:121125323 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_55805 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:121125304-121125325
64251 chr5 134229342 134229342 1 + G T COAD 134229340 + 134229320 134229360 41 GCACTGGATGCATCTCAGCACAGCAGGTATCTTCCATTGGT GCACTGGATGCATCTCAGCACATCAGGTATCTTCCATTGGT < 41bp 0.826879649991535 0.534559446902071 0.28325814 0.28924176 prediction 0.584640406178927 Functional Loss - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229340 chr5:134229342 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_55807 0 0 1 SND1 POSTAR2 ENCODE chr5:134229209-134229346
64251 chr21 42609500 42609500 1 + G T OV 42609497 + 42609477 42609517 41 GTGAAGTACACACAAGGAAGCTGGACGGGCTTCGTTGGGGA GTGAAGTACACACAAGGAAGCTGTACGGGCTTCGTTGGGGA < 41bp 0.792301886467142 0.415108201162422 0.16223648 0.12272295 prediction 0.584603772934285 Functional Loss - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42609497 chr21:42609500 nonsynonymous SNV 0.905 4 24 hm5C_associated_SNPs_55811 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:42609500-42609501
64251 chr10 102738746 102738746 1 - C A SARC 102738749 - 102738729 102738769 41 GACACGAGCCACACGGGCCACACGGTGACTGCTGCGGCTCT GACACGAGCCACACGGGCCACACTGTGACTGCTGCGGCTCT < 41bp 0.88936289633348 0.597063386082637 0.104692936 0.020806164 prediction 0.584599020501685 Functional Loss - SEMA4G ENSG00000055950;ENSG00000095539 CDS Human other chr10:102738749 chr10:102738746 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_55812 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:102738725-102738746
64251 chr8 17354617 17354617 1 + G T rs560510676 17354615 + 17354595 17354635 41 CCCTCCTTCTGCAGCGCGGCCGGCGGGCGCTCCTCTTCGCG CCCTCCTTCTGCAGCGCGGCCGTCGGGCGCTCCTCTTCGCG < 41bp 0.792298834474883 0.466640479556127 0.8988966 0.4533338 prediction 0.584597668949767 Functional Loss - SLC7A2 ENSG00000003989 UTR5 Human protein_coding chr8:17354615 chr8:17354617 . . 0 23 hm5C_associated_SNPs_55813 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:17354600-17354680
64251 chr10 72179837 72179837 1 + G T LAML 72179834 + 72179814 72179854 41 ATTTGAACAACTTGAACAATCACGACAGGAAACATGCAGTT ATTTGAACAACTTGAACAATCACTACAGGAAACATGCAGTT < 41bp 0.792295073916407 0.4425815596329 0.06842786 0.09047744 prediction 0.584590147832814 Functional Loss - EIF4EBP2 ENSG00000148730 CDS Human protein_coding chr10:72179834 chr10:72179837 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_55814 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:72179773-72179839
64251 chrX 70756094 70756094 1 + G T KIRC 70756091 + 70756071 70756111 41 GGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTG GGCACATCGAGAATATCAGGCAGTAGATTTTGAGGCAGCTG < 41bp 0.79229447183468 0.416124570048003 0.41545555 0.14060187 prediction 0.584588943669359 Functional Loss - OGT ENSG00000147162 CDS Human protein_coding chrX:70756091 chrX:70756094 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_55815 0 0 24 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70756040-70756140
64251 chr6 150269921 150269921 1 + G T rs114531652 150269919 + 150269899 150269939 41 GATCAAACTCGCCCTTCTGTCTGGCCAGCTGCCCACGACCT GATCAAACTCGCCCTTCTGTCTTGCCAGCTGCCCACGACCT < 41bp 0.8280723651627 0.535799974426951 0.20649007 0.054303914 prediction 0.584544781471497 Functional Loss - ULBP2 ENSG00000131015 UTR3 Human protein_coding chr6:150269919 chr6:150269921 . . 0 23 hm5C_associated_SNPs_55816 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:150269911-150269949
64251 chr6 97000488 97000488 1 + G T LUSC 97000486 + 97000466 97000506 41 CCACAGCATGCTCCATGCACCTGGAAGATGTGTCCCACAGA CCACAGCATGCTCCATGCACCTTGAAGATGTGTCCCACAGA < 41bp 0.808415265366705 0.516180281532203 0.08621621 0.008485496 prediction 0.584469967669002 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:97000486 chr6:97000488 stopgain 1.000 1 23 hm5C_associated_SNPs_55821 0 0 1 IGF2BP2 POSTAR2 ENCODE chr6:97000402-97000502
64251 chr12 52452475 52452475 1 + G C LUAD 52452474 + 52452454 52452494 41 CCTGTACCCTTCCCGCAGACCGGCATGGGCTGCAGGAGCCG CCTGTACCCTTCCCGCAGACCCGCATGGGCTGCAGGAGCCG < 41bp 0.7922294857485 0.490308180149526 0.33730927 0.14224449 prediction 0.584458971497001 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52452474 chr12:52452475 nonsynonymous SNV 0.956 4 22 hm5C_associated_SNPs_55823 0 0 1 BUD13 POSTAR2 ENCODE chr12:52452424-52452511
64251 chr16 2130194 2130194 1 + G T LUAD 2130192 + 2130172 2130212 41 ATGGTCTTCGAGTTGGCGCCCTGGACGTGCCGGCCTCCCAG ATGGTCTTCGAGTTGGCGCCCTTGACGTGCCGGCCTCCCAG < 41bp 0.792200429357704 0.471321740797484 0.85941416 0.46571395 prediction 0.584400858715407 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2130192 chr16:2130194 synonymous SNV . 0 23 hm5C_associated_SNPs_55828 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2130184-2130222
64251 chr4 141294835 141294835 1 + G T SARC 141294833 + 141294813 141294853 41 AGTGTCCCGGCCTGAGGTGTCGGCCGGATCCCTCCTTCTCC AGTGTCCCGGCCTGAGGTGTCGTCCGGATCCCTCCTTCTCC < 41bp 0.792179484609869 0.475037092375866 0.589863 0.25876993 prediction 0.584358969219738 Functional Loss - SCOC ENSG00000153130 CDS Human protein_coding chr4:141294833 chr4:141294835 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_55831 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:141294800-141294840
64251 chr2 173356009 173356009 1 + A C UCEC 173356005 + 173355985 173356025 41 TGCCCGCTGCGGGGGCTGGACAGCAAGGCGTCTCTTATTTT TGCCCGCTGCGGGGGCTGGACAGCCAGGCGTCTCTTATTTT < 41bp 0.792170711359642 0.385415197176944 0.11267549 0.05466798 prediction 0.584341422719284 Functional Loss - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173356005 chr2:173356009 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_55833 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:173356003-173356026
64251 chr20 62663358 62663358 1 + G T UCEC 62663355 + 62663335 62663375 41 GACTCGGACCTGGGGGATGCCTGGGCCTTCTTCTACAAGTT GACTCGGACCTGGGGGATGCCTGTGCCTTCTTCTACAAGTT < 41bp 0.792154051835544 0.407135943180841 0.7589184 0.3089775 prediction 0.584308103671089 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62663355 chr20:62663358 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_55840 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:62663332-62663359
64251 chr2 118577359 118577359 1 + G T LUAD 118577356 + 118577336 118577376 41 GTGAGGTGCCCAGTCTGCCCCTGGGACTGACAGGTAACGTC GTGAGGTGCCCAGTCTGCCCCTGTGACTGACAGGTAACGTC < 41bp 0.792140391277683 0.437384214436256 0.2035658 0.065428644 prediction 0.584280782555366 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118577356 chr2:118577359 stopgain 0.990 1 24 hm5C_associated_SNPs_55842 0 0 9 ALKBH5 POSTAR2 GSE38201,GSM936506 chr2:118577337-118577361
64251 chr17 41063095 41063095 1 + G T UCEC 41063093 + 41063073 41063113 41 TGTGGACTCTGGAGAAAGCCCAGAGGTGGTGCGAGCAGCCA TGTGGACTCTGGAGAAAGCCCATAGGTGGTGCGAGCAGCCA < 41bp 0.792134236866601 0.461743632965399 0.7699164 0.28925163 prediction 0.584268473733202 Functional Loss - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063093 chr17:41063095 nonsynonymous SNV 0.864 1 23 hm5C_associated_SNPs_55844 0 0 3 RPS3 POSTAR2 ENCODE chr17:41063034-41063251
64251 chr15 42140166 42140166 1 + G T rs1061354 42140163 + 42140143 42140183 41 AGAGCCTCGGGCTCAGGTGGCACGGTCCCAGGGTCCAGGCT AGAGCCTCGGGCTCAGGTGGCACTGTCCCAGGGTCCAGGCT < 41bp 0.792121336552058 0.42147863619902 0.8400244 0.33936042 prediction 0.584242673104116 Functional Loss - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 UTR3 Human other chr15:42140163 chr15:42140166 . . 0 24 hm5C_associated_SNPs_55847 0 0 1 LSM11 POSTAR2 ENCODE chr15:42140109-42140207
64251 chr16 1720768 1720768 1 + G C HNSC 1720767 + 1720747 1720787 41 CAGCTTGTTGGATGGAAACTCGCGGGACTCATTTGTGTCCA CAGCTTGTTGGATGGAAACTCCCGGGACTCATTTGTGTCCA < 41bp 0.801954850724946 0.509878967516008 0.8909998 0.232676 prediction 0.584151766417876 Functional Loss - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1720767 chr16:1720768 synonymous SNV . 0 22 hm5C_associated_SNPs_55851 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr16:1720756-1720776
64251 chr11 111915896 111915896 1 + G T UCEC 111915893 + 111915873 111915913 41 TGTTGTGCCTCCCACAGGTCCTGGAATGGCACCAGTTCCTA TGTTGTGCCTCCCACAGGTCCTGTAATGGCACCAGTTCCTA < 41bp 0.890679976115986 0.598645762690905 0.21872318 0.14868945 prediction 0.584068426850162 Functional Loss - DLAT ENSG00000150768 CDS Human protein_coding chr11:111915893 chr11:111915896 nonsynonymous SNV 0.336 0 24 hm5C_associated_SNPs_55856 0 0 3 U2AF2 POSTAR2 ENCODE chr11:111915848-111915920
64251 chrX 48673145 48673145 1 + G C BLCA 48673144 + 48673124 48673164 41 GTCCTGCTGCCAGTCGCCCTCGAGGTCCTGGGGATCTGGGG GTCCTGCTGCCAGTCGCCCTCCAGGTCCTGGGGATCTGGGG < 41bp 0.79232166697773 0.500291451287618 0.9218614 0.61355275 prediction 0.584060431380224 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48673144 chrX:48673145 nonsynonymous SNV 0.268 3 22 hm5C_associated_SNPs_55858 0 0 9 DDX24 POSTAR2 ENCODE chrX:48673120-48673145
64251 chrX 19368189 19368189 1 + G T UCEC 19368187 + 19368167 19368207 41 AAGCAGATCAGCTGTATAAACAGAAAATTATTCGTGGTTTC AAGCAGATCAGCTGTATAAACATAAAATTATTCGTGGTTTC < 41bp 0.792024817128301 0.464260102778669 0.6159656 0.33422774 prediction 0.584049634256603 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19368187 chrX:19368189 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_55859 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:19368181-19368216
64251 chr17 21203937 21203937 1 + G T UCEC 21203935 + 21203915 21203955 41 ATGGGGTGGTAGAGAAGGTGCGGCACGCCCAGAGCGGCACC ATGGGGTGGTAGAGAAGGTGCGTCACGCCCAGAGCGGCACC < 41bp 0.851077534617984 0.559065389622826 0.6228409 0.31060037 prediction 0.584024289990314 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21203935 chr17:21203937 synonymous SNV . 0 23 hm5C_associated_SNPs_55864 0 0 4 DDX3X POSTAR2 ENCODE chr17:21203856-21203954
64251 chr14 23944502 23944502 1 + G T LUAD 23944500 + 23944480 23944520 41 GACATGATGCAGTTTTGAGACTGGTGGAGATTCGCACGGTA GACATGATGCAGTTTTGAGACTTGTGGAGATTCGCACGGTA < 41bp 0.825323568173894 0.533319694730687 0.28086895 0.22018519 prediction 0.584007746886414 Functional Loss - NGDN ENSG00000129460 CDS Human protein_coding chr14:23944500 chr14:23944502 synonymous SNV . 0 23 hm5C_associated_SNPs_55865 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:23944471-23944513
64251 chr11 47298359 47298359 1 + A C COAD 47298355 + 47298335 47298375 41 TCGTGGCAATGATCTACCCACTGGAGTATATGTTTCCTGTC TCGTGGCAATGATCTACCCACTGGCGTATATGTTTCCTGTC < 41bp 0.791974627745159 0.401831165323534 0.115088016 0.14514688 prediction 0.583949255490318 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47298355 chr11:47298359 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_55870 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:47298345-47298381
64251 chr19 13058723 13058723 1 + G T SARC 13058720 + 13058700 13058740 41 TCGTGATGCCTTCCCCGTGGCTGGACAGAAACTCATCTATG TCGTGATGCCTTCCCCGTGGCTGTACAGAAACTCATCTATG < 41bp 0.79196825879015 0.412230588209189 0.36293602 0.1496171 prediction 0.5839365175803 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13058720 chr19:13058723 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55871 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:13058660-13058740
64251 chr1 155023119 155023119 1 - C A LIHC 155023121 - 155023101 155023141 41 GGCGCAGGAGCGGGCAGCCGCGGTGCAGGATATCCGCCAGC GGCGCAGGAGCGGGCAGCCGCGTTGCAGGATATCCGCCAGC < 41bp 0.791965212645275 0.463439366849019 0.8944026 0.47524518 prediction 0.583930425290551 Functional Loss - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155023121 chr1:155023119 nonsynonymous SNV 0.389 0 23 hm5C_associated_SNPs_55872 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155023105-155023136
64251 chr3 25833280 25833280 1 + A T GBM 25833276 + 25833256 25833296 41 TCCAGAGCCCGGGCTCTGAGCACAAACTCAGATCCCAAGTT TCCAGAGCCCGGGCTCTGAGCACATACTCAGATCCCAAGTT < 41bp 0.791902585602228 0.470933037486867 0.16492379 0.25281337 prediction 0.583805171204456 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833276 chr3:25833280 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_55882 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:25833279-25833305
64251 chr6 25983665 25983665 1 + G T SKCM 25983663 + 25983643 25983683 41 CAAGAGCCTCAGTCTGGATTCTGGACCCTCAGGCTGTGCAA CAAGAGCCTCAGTCTGGATTCTTGACCCTCAGGCTGTGCAA < 41bp 0.828769007376035 0.53686910589414 0.48232794 0.16638309 prediction 0.58379980296379 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983663 chr6:25983665 nonsynonymous SNV 0.409 4 23 hm5C_associated_SNPs_55883 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:25983622-25983683
64251 chr2 120776812 120776812 1 + A T LUAD 120776808 + 120776788 120776828 41 TCACGTGTCGGGTGTCCCTTCTGGATGGTACTGATGTTAGT TCACGTGTCGGGTGTCCCTTCTGGTTGGTACTGATGTTAGT < 41bp 0.823450974272147 0.531551076774709 0.16257957 0.12659827 prediction 0.583799794994877 Functional Loss - EPB41L5 ENSG00000115109 CDS Human protein_coding chr2:120776808 chr2:120776812 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_55884 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:120776790-120776816
64251 chr5 81606013 81606013 1 + A C STAD 81606009 + 81605989 81606029 41 CTTGGTGATGCTGGAAACCCCAGAAGTCTTGCTATAAGGTA CTTGGTGATGCTGGAAACCCCAGACGTCTTGCTATAAGGTA < 41bp 0.791852482750831 0.401169969107391 0.7386253 0.5781706 prediction 0.583704965501662 Functional Loss - ATP6AP1L ENSG00000205464 CDS Human protein_coding chr5:81606009 chr5:81606013 nonsynonymous SNV 0.896 1 25 hm5C_associated_SNPs_55889 0 0 1 TIA1 POSTAR2 ENCODE chr5:81605922-81606016
64251 chr6 170667405 170667405 1 + A T PRAD 170667401 + 170667381 170667421 41 CCACCTCGCAGCTTGTAAATCTACAGGTACAGACGTGACCA CCACCTCGCAGCTTGTAAATCTACTGGTACAGACGTGACCA < 41bp 0.841072243943925 0.549231999316892 0.38779595 0.15424791 prediction 0.583680489254066 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170667401 chr6:170667405 nonsynonymous SNV 0.692 2 25 hm5C_associated_SNPs_55891 0 0 2 PRPF8 POSTAR2 ENCODE chr6:170667381-170667460
64251 chr5 1815984 1815984 1 + G T LUSC 1815982 + 1815962 1816002 41 CAGGACAAAGAAACAAAAACCGGCACATGCGGTTACTGTGG CAGGACAAAGAAACAAAAACCGTCACATGCGGTTACTGTGG < 41bp 0.80966570702785 0.517825966941162 0.7686202 0.5960553 prediction 0.583679480173376 Functional Loss - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1815982 chr5:1815984 nonsynonymous SNV 0.162 4 23 hm5C_associated_SNPs_55892 0 0 31 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:1815967-1815997
64251 chr7 99123821 99123821 1 + G T GBM 99123819 + 99123799 99123839 41 GTGGGAAGAGCTACAATCAGCGGGTGCACCTCACCCAGCAC GTGGGAAGAGCTACAATCAGCGTGTGCACCTCACCCAGCAC < 41bp 0.862841768402318 0.571004134959383 0.9258497 0.8715931 prediction 0.583675266885869 Functional Loss - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123819 chr7:99123821 synonymous SNV . 0 23 hm5C_associated_SNPs_55894 0 0 2 EWSR1 POSTAR2 SRX029344 chr7:99123795-99123824
64251 chr7 23240068 23240068 1 + G T UCEC 23240066 + 23240046 23240086 41 ACTTCCAGCTTCCTTGGCAACAGGTCCTGTCAGAGCTCCAG ACTTCCAGCTTCCTTGGCAACATGTCCTGTCAGAGCTCCAG < 41bp 0.850987786520571 0.559159848264435 0.29333094 0.10130435 prediction 0.583655876512272 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23240066 chr7:23240068 nonsynonymous SNV 0.031 3 23 hm5C_associated_SNPs_55896 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:23240015-23240084
64251 chr12 85694954 85694954 1 + G T UCEC 85694952 + 85694932 85694972 41 GATTCAGAACAATTTGTGGGCAGGAAATGCAAGTGGTGGTT GATTCAGAACAATTTGTGGGCATGAAATGCAAGTGGTGGTT < 41bp 0.795238261235761 0.503433335278167 0.5938358 0.2253823 prediction 0.583609851915189 Functional Loss - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85694952 chr12:85694954 stopgain 1.000 1 23 hm5C_associated_SNPs_55899 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:85694923-85694961
64251 chr22 44514932 44514932 1 + G T COAD 44514929 + 44514909 44514949 41 CTCCTGCAGGTCCTCCTCGACTGGATTAATGACGTGCTGGT CTCCTGCAGGTCCTCCTCGACTGTATTAATGACGTGCTGGT < 41bp 0.890346428149393 0.598542895642202 0.3764379 0.1520572 prediction 0.583607065014381 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44514929 chr22:44514932 nonsynonymous SNV 0.070 5 24 hm5C_associated_SNPs_55900 0 0 1 BUD13 POSTAR2 ENCODE chr22:44514913-44515021
64251 chr2 220144591 220144591 1 + A T HNSC 220144587 + 220144567 220144607 41 CTACGAGATCCTAGACGTGCCGCGAAGTGCGTCCGCTGATG CTACGAGATCCTAGACGTGCCGCGTAGTGCGTCCGCTGATG < 41bp 0.82732170928985 0.535523470399989 0.2901523 0.05815789 prediction 0.583596477779722 Functional Loss - DNAJB2 ENSG00000135924 CDS Human protein_coding chr2:220144587 chr2:220144591 synonymous SNV . 0 25 hm5C_associated_SNPs_55901 0 0 1 PPIG POSTAR2 ENCODE chr2:220144545-220144625
64251 chr21 47409557 47409557 1 + G T UCEC 47409555 + 47409535 47409575 41 ACCTCGGACCTGTTGGGTACCAGGGAATGAAGGTACGTGCC ACCTCGGACCTGTTGGGTACCATGGAATGAAGGTACGTGCC < 41bp 0.857490780038165 0.565706089622211 0.89766526 0.25376529 prediction 0.583569380831908 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47409555 chr21:47409557 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_55902 0 0 2 EFTUD2 POSTAR2 ENCODE chr21:47409459-47409562
64251 chr14 56763638 56763638 1 + G T LUAD 56763635 + 56763615 56763655 41 GAGAGGGAGTGTCCCATGTGCAGGACTGTGGGCCCCTATGT GAGAGGGAGTGTCCCATGTGCAGTACTGTGGGCCCCTATGT < 41bp 0.884795416057702 0.593019838385512 0.8960584 0.22103861 prediction 0.58355115534438 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56763635 chr14:56763638 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_55904 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr14:56763625-56763666
64251 chr11 68370860 68370860 1 + G T UCEC 68370858 + 68370838 68370878 41 CTCTGACGGAGAGGAGGATGCAGAAAGTACAGACAAGGTAA CTCTGACGGAGAGGAGGATGCATAAAGTACAGACAAGGTAA < 41bp 0.815940357005668 0.524166073667459 0.5611801 0.74318635 prediction 0.583548566676418 Functional Loss - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68370858 chr11:68370860 stopgain 0.995 0 23 hm5C_associated_SNPs_55905 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:68370819-68370860
64251 chr17 40705558 40705558 1 - C A CESC 40705560 - 40705540 40705580 41 ATGTCTGGCAGGAAGGCCTGCAGCATCCGCACAGTCCCTAC ATGTCTGGCAGGAAGGCCTGCATCATCCGCACAGTCCCTAC < 41bp 0.842735425818229 0.550997903598558 0.114589125 0.06879434 prediction 0.583475044439341 Functional Loss - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705560 chr17:40705558 nonsynonymous SNV 0.644 2 23 hm5C_associated_SNPs_55909 0 0 1 RBM15 POSTAR2 ENCODE chr17:40705544-40705580
64251 chr19 52825009 52825009 1 + A C SKCM 52825005 + 52824985 52825025 41 GTTCCTCTGTTTCCTGTCTTCAAGAAATGTCTTCCAGTGTC GTTCCTCTGTTTCCTGTCTTCAAGCAATGTCTTCCAGTGTC < 41bp 0.791724083817672 0.427841660055726 0.17317215 0.20428753 prediction 0.583448167635344 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52825005 chr19:52825009 nonsynonymous SNV 0.026 0 25 hm5C_associated_SNPs_55913 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:52824927-52825045
64251 chr1 906212 906212 1 + G T HNSC 906210 + 906190 906230 41 GAGAGGGGCCTGCCCTGTGGCTGCGGAGCACGTGTGTGTAT GAGAGGGGCCTGCCCTGTGGCTTCGGAGCACGTGTGTGTAT < 41bp 0.791722995584807 0.462609216662775 0.26118827 0.21384373 prediction 0.583445991169614 Functional Loss - PLEKHN1 ENSG00000187583 CDS Human protein_coding chr1:906210 chr1:906212 synonymous SNV . 0 23 hm5C_associated_SNPs_55914 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:906174-906216
64251 chr12 85677595 85677595 1 + G T LUAD 85677592 + 85677572 85677612 41 TCTTTCAGAAAACTCATTACCCGGATGTGTATGTCAGAGAA TCTTTCAGAAAACTCATTACCCGTATGTGTATGTCAGAGAA < 41bp 0.884134074247305 0.592412500711933 0.6989827 0.026406854 prediction 0.583443147070745 Functional Loss - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85677592 chr12:85677595 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_55915 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:85677577-85677648
64251 chr2 235951538 235951538 1 + G T LUAD 235951535 + 235951515 235951555 41 AGTGGTACATCGGCTACTACCAGGGCAGGGTGGGCCTCGTG AGTGGTACATCGGCTACTACCAGTGCAGGGTGGGCCTCGTG < 41bp 0.891350530719416 0.599635113017737 0.9243721 0.3753605 prediction 0.583430835403358 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235951535 chr2:235951538 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_55916 0 0 2 GRWD1 POSTAR2 ENCODE chr2:235951508-235951560
64251 chr2 169684725 169684725 1 + G T ESCA 169684723 + 169684703 169684743 41 GAATGAAATCCACAGCGGACCTGCATCAGTGAGTTCTCCCA GAATGAAATCCACAGCGGACCTTCATCAGTGAGTTCTCCCA < 41bp 0.79168115844214 0.468286013109865 0.2143518 0.12405047 prediction 0.58336231688428 Functional Loss - NOSTRIN ENSG00000163072 CDS Human protein_coding chr2:169684723 chr2:169684725 synonymous SNV . 0 23 hm5C_associated_SNPs_55922 0 0 5 SF3B4 POSTAR2 ENCODE chr2:169684667-169684739
64251 chr19 18304786 18304786 1 + G T COAD 18304783 + 18304763 18304803 41 CGAGGCTTCCCAAATGTCCTCAAGAAGGTCCTCGTGGATCA CGAGGCTTCCCAAATGTCCTCAATAAGGTCCTCGTGGATCA < 41bp 0.884170066562263 0.592526639956466 0.15644306 0.05119455 prediction 0.583286853211594 Functional Loss - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18304783 chr19:18304786 nonsynonymous SNV 0.420 2 24 hm5C_associated_SNPs_55926 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:18304786-18304787
64251 chr17 27068496 27068496 1 + G T LUSC 27068494 + 27068474 27068514 41 GGGAAGGAGGGATGAGGATGCCGGACTCCCTCGGCCAGTGC GGGAAGGAGGGATGAGGATGCCTGACTCCCTCGGCCAGTGC < 41bp 0.85137197201567 0.559754720719222 0.77149177 0.36320287 prediction 0.583234502592895 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27068494 chr17:27068496 stopgain 0.733 1 23 hm5C_associated_SNPs_55929 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:27068487-27068534
64251 chr20 1099429 1099429 1 + G T OV 1099426 + 1099406 1099446 41 CGCGGGCGCTCATGGCGGGCCTGGAGGTACTGTTCGCATCG CGCGGGCGCTCATGGCGGGCCTGTAGGTACTGTTCGCATCG < 41bp 0.88255798333621 0.590945618875387 0.5837277 0.2624695 prediction 0.583224728921647 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1099426 chr20:1099429 stopgain 0.848 1 24 hm5C_associated_SNPs_55930 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr20:1099413-1099437
64251 chr12 53646693 53646693 1 + G C PRAD 53646692 + 53646672 53646712 41 GGCTGGAACTGTCAAGATGCCGGGCTAAACCCCCTGGAAGG GGCTGGAACTGTCAAGATGCCCGGCTAAACCCCCTGGAAGG < 41bp 0.7915874154162 0.494141101277538 0.8341426 0.44931102 prediction 0.5831748308324 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53646692 chr12:53646693 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_55933 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:53646680-53646700
64251 chr19 11152127 11152127 1 + A C UCEC 11152123 + 11152103 11152143 41 CGCGACAAGGACGACGAGAGCAAGAAGCAGAAGAAGCGCGG CGCGACAAGGACGACGAGAGCAAGCAGCAGAAGAAGCGCGG < 41bp 0.791549897029978 0.420310578810834 0.8522159 0.74667186 prediction 0.583099794059956 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152123 chr19:11152127 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_55937 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:11152120-11152140
64251 chr17 70119947 70119947 1 + G T LUAD 70119945 + 70119925 70119965 41 GCACGGCCAGGTCACCTACACGGGCAGCTACGGCATCAGCA GCACGGCCAGGTCACCTACACGTGCAGCTACGGCATCAGCA < 41bp 0.791510238163684 0.460131904395809 0.7488777 0.07405031 prediction 0.583020476327369 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119945 chr17:70119947 nonsynonymous SNV 0.977 3 23 hm5C_associated_SNPs_55941 0 0 1 RPS3 POSTAR2 ENCODE chr17:70119941-70120086
64251 chr14 88904415 88904415 1 + G T STAD 88904412 + 88904392 88904432 41 TCGGCACCAAAGGATGAGAACGAGATATTCCCTTCACCAAC TCGGCACCAAAGGATGAGAACGATATATTCCCTTCACCAAC < 41bp 0.791495880824433 0.419439028656142 0.5198522 0.1023643 prediction 0.582991761648866 Functional Loss - SPATA7 ENSG00000042317 CDS Human protein_coding chr14:88904412 chr14:88904415 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_55943 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:88904385-88904415
64251 chr19 56186643 56186643 1 + G T rs567640180 56186640 + 56186620 56186660 41 CCCTCCCCCGCCCGGCTCTCCGCGCCCCTTCTGGGCGGCGG CCCTCCCCCGCCCGGCTCTCCGCTCCCCTTCTGGGCGGCGG < 41bp 0.79148946105134 0.439122079788332 0.87524825 0.5428138 prediction 0.58297892210268 Functional Loss - EPN1 ENSG00000063245 UTR5 Human protein_coding chr19:56186640 chr19:56186643 . . 0 24 hm5C_associated_SNPs_55945 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56186640-56186660
64251 chr1 93581172 93581172 1 + G T UCEC 93581169 + 93581149 93581189 41 TTACTGCTATTGTGGAGGCCCTGGAGAGTAAGTAAATACAG TTACTGCTATTGTGGAGGCCCTGTAGAGTAAGTAAATACAG < 41bp 0.791466903406145 0.44641433691435 0.1703349 0.036907464 prediction 0.582933806812289 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93581169 chr1:93581172 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_55949 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:93581144-93581174
64251 chr6 88182724 88182724 1 + G T LUAD 88182721 + 88182701 88182741 41 GCGGGGGGCTGTCGGGGAACCATGGCTGCCCCGAGAGGTGA GCGGGGGGCTGTCGGGGAACCATTGCTGCCCCGAGAGGTGA < 41bp 0.864522660928831 0.573071198960308 0.8733214 0.6535584 prediction 0.582902923937044 Functional Loss - SLC35A1 ENSG00000164414 CDS Human protein_coding chr6:88182721 chr6:88182724 nonsynonymous SNV 0.955 0 24 hm5C_associated_SNPs_55952 0 0 3 DDX3X POSTAR2 ENCODE chr6:88182694-88182739
64251 chr17 7577508 7577508 1 - T G HNSC 7577512 - 7577492 7577532 41 CCATCCTCACCATCATCACACTGGAAGACTCCAGGTCAGGA CCATCCTCACCATCATCACACTGGCAGACTCCAGGTCAGGA < 41bp 0.791446216062229 0.421332378843309 0.14710239 0.22066078 prediction 0.582892432124457 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577512 chr17:7577508 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_55953 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:7577500-7577520
64251 chr4 39409343 39409343 1 + A T LIHC 39409339 + 39409319 39409359 41 TGGGACAGGTATGCATGCCCCTGGAGAGAAGGGAAATTTAG TGGGACAGGTATGCATGCCCCTGGTGAGAAGGGAAATTTAG < 41bp 0.791445376047677 0.486120707920702 0.24758023 0.30205417 prediction 0.582890752095355 Functional Loss - KLB ENSG00000134962 CDS Human protein_coding chr4:39409339 chr4:39409343 synonymous SNV . 0 25 hm5C_associated_SNPs_55955 0 0 4 RPS3 POSTAR2 ENCODE chr4:39409313-39409349
64251 chr19 17628198 17628198 1 + G T PAAD 17628196 + 17628176 17628216 41 TCCCAGACCACCCCCTCCTACAGGTGAGCACACCAATGCGG TCCCAGACCACCCCCTCCTACATGTGAGCACACCAATGCGG < 41bp 0.791429073474852 0.453756242063279 0.4461513 0.31972337 prediction 0.582858146949704 Functional Loss - PGLS ENSG00000130313 CDS Human protein_coding chr19:17628196 chr19:17628198 nonsynonymous SNV 0.952 4 23 hm5C_associated_SNPs_55957 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17628167-17628199
64251 chr3 136012687 136012687 1 + G T UCEC 136012684 + 136012664 136012704 41 CAGGAGGAGCTCGGTGGTGCCAAGACCCACACCACCATGTC CAGGAGGAGCTCGGTGGTGCCAATACCCACACCACCATGTC < 41bp 0.791428153186095 0.410075218075043 0.36351377 0.17696053 prediction 0.58285630637219 Functional Loss - PCCB ENSG00000114054 CDS Human protein_coding chr3:136012684 chr3:136012687 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_55958 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:136012650-136012688
64251 chrX 153668842 153668842 1 + G T UCEC 153668840 + 153668820 153668860 41 ACGGCTTGGGCGAGCTGCCCCAGGGTTTTGCAAGGTGAGGA ACGGCTTGGGCGAGCTGCCCCATGGTTTTGCAAGGTGAGGA < 41bp 0.856949771625758 0.565549701067646 0.8664162 0.037375152 prediction 0.582800141116224 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668840 chrX:153668842 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_55962 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153668805-153668845
64251 chr13 47263286 47263286 1 + G C BLCA 47263285 + 47263265 47263305 41 CAGCAAGAAGGATTCTGATTCGGGAGTTGGAAGTGATAATG CAGCAAGAAGGATTCTGATTCCGGAGTTGGAAGTGATAATG < 41bp 0.793545904911826 0.502148315987946 0.89733887 0.646693 prediction 0.582795177847759 Functional Loss - LRCH1 ENSG00000136141 CDS Human protein_coding chr13:47263285 chr13:47263286 synonymous SNV . 0 22 hm5C_associated_SNPs_55964 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:47263268-47263289
64251 chr16 3187371 3187371 1 + G T LGG 3187369 + 3187349 3187389 41 TGGAAGATTCCTCCTGGGAACAGGAATCTGCCCAGCATGAG TGGAAGATTCCTCCTGGGAACATGAATCTGCCCAGCATGAG < 41bp 0.843091062708565 0.551700228181321 0.57192075 0.1283043 prediction 0.582781669054487 Functional Loss - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3187369 chr16:3187371 nonsynonymous SNV 0.747 2 23 hm5C_associated_SNPs_55966 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:3187366-3187389
64251 chr19 5041198 5041198 1 + G T SARC 5041196 + 5041176 5041216 41 GATGACCTTGAACGCAAATACTGGAAGAACCTCACCTTTGT GATGACCTTGAACGCAAATACTTGAAGAACCTCACCTTTGT < 41bp 0.827477746781039 0.536101234022402 0.80485606 0.26294172 prediction 0.582753025517275 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5041196 chr19:5041198 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_55968 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:5041186-5041208
64251 chr11 77301295 77301295 1 + G T SARC 77301292 + 77301272 77301312 41 CTGACGCTCGTCTACTTCTTCTCGCTTGTGCATGGCCTGAC CTGACGCTCGTCTACTTCTTCTCTCTTGTGCATGGCCTGAC < 41bp 0.79137261681985 0.415794647314342 0.046831608 0.0642035 prediction 0.582745233639701 Functional Loss - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301292 chr11:77301295 synonymous SNV . 0 24 hm5C_associated_SNPs_55969 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:77301295-77301316
64251 chr1 7837270 7837270 1 + G T UCEC 7837268 + 7837248 7837288 41 ACAAGGTTCTGGAAAGAGACCAGAAGCTCTCTGAGTTAGAC ACAAGGTTCTGGAAAGAGACCATAAGCTCTCTGAGTTAGAC < 41bp 0.844510954426654 0.553175253619887 0.25916612 0.111893564 prediction 0.582671401613534 Functional Loss - VAMP3 ENSG00000049245 CDS Human protein_coding chr1:7837268 chr1:7837270 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_55972 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:7837231-7837294
64251 chr22 45929726 45929726 1 + G T LUAD 45929724 + 45929704 45929744 41 TGGGCTCTTTCCGCTGCCAGCGGGACAGCAGCTGCGGGACT TGGGCTCTTTCCGCTGCCAGCGTGACAGCAGCTGCGGGACT < 41bp 0.863333359075754 0.572000067339643 0.904489 0.4809901 prediction 0.582666583472222 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45929724 chr22:45929726 synonymous SNV . 0 23 hm5C_associated_SNPs_55973 0 0 1 RPS3 POSTAR2 ENCODE chr22:45929698-45929744
64251 chr4 3424297 3424297 1 + G T LUAD 3424294 + 3424274 3424314 41 CTCTTCCTGGTGGGCGGGGACAAGGTACTGGGCCCGCCTGA CTCTTCCTGGTGGGCGGGGACAATGTACTGGGCCCGCCTGA < 41bp 0.791330992602779 0.436772335803359 0.9134637 0.8889365 prediction 0.582661985205558 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3424294 chr4:3424297 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_55974 0 0 2 BUD13 POSTAR2 ENCODE chr4:3424283-3424298
64251 chr4 164428284 164428284 1 + G T UCEC 164428281 + 164428261 164428301 41 TTACGAGAGAGGCCCACAAACAAGAAAAAAAGGAAAAGTAA TTACGAGAGAGGCCCACAAACAATAAAAAAAGGAAAAGTAA < 41bp 0.854372783610258 0.563045117212686 0.90703607 0.8811816 prediction 0.582655332795144 Functional Loss - TMA16 ENSG00000198498 CDS Human protein_coding chr4:164428281 chr4:164428284 stopgain 0.995 1 24 hm5C_associated_SNPs_55976 0 0 4 GRWD1 POSTAR2 ENCODE chr4:164428226-164428290
64251 chr3 37458861 37458861 1 + G T BLCA 37458858 + 37458838 37458878 41 GTGCGCCCGAACTTTTCACACAAGAATTGGAGGAGATTTAA GTGCGCCCGAACTTTTCACACAATAATTGGAGGAGATTTAA < 41bp 0.791286537285915 0.436276425271553 0.14590925 0.03870812 prediction 0.58257307457183 Functional Loss - C3orf35 ENSG00000198590 CDS Human protein_coding chr3:37458858 chr3:37458861 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_55980 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:37458858-37458876
64251 chr15 89911321 89911321 1 + A C CHOL 89911317 + 89911297 89911337 41 CCGTCATAAAGCTAGATAACCGAAAGTAGAAATGATTCTCA CCGTCATAAAGCTAGATAACCGAACGTAGAAATGATTCTCA < 41bp 0.791284407862308 0.461529286460289 0.200461 0.14338472 prediction 0.582568815724617 Functional Loss - MIR9-3 ENSG00000207819 ncRNA_exonic Human other chr15:89911317 chr15:89911321 . . 0 25 hm5C_associated_SNPs_55982 0 0 1 DGCR8 POSTAR2 ENCODE chr15:89911264-89911324
64251 chr19 17972966 17972966 1 + A C OV 17972962 + 17972942 17972982 41 ATCTGGCTGCGCTATGACTCCCGGAGCGGCACCCACAACAT ATCTGGCTGCGCTATGACTCCCGGCGCGGCACCCACAACAT < 41bp 0.904343809845349 0.613083727390608 0.40253288 0.3881614 prediction 0.582520164909484 Functional Loss - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972962 chr19:17972966 nonsynonymous SNV 0.921 2 25 hm5C_associated_SNPs_55988 0 0 1 YBX3 POSTAR2 ENCODE chr19:17972942-17972970
64251 chr18 8784097 8784097 1 + G T LUAD 8784094 + 8784074 8784114 41 GAGGGTGCAAGTCCTGGTGCCGGGGGTGGGGCCCCCCTGCA GAGGGTGCAAGTCCTGGTGCCGGTGGTGGGGCCCCCCTGCA < 41bp 0.901290415167202 0.610045490233483 0.9286134 0.8859617 prediction 0.582489849867438 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784094 chr18:8784097 synonymous SNV . 0 24 hm5C_associated_SNPs_55990 0 0 4 DDX24 POSTAR2 ENCODE chr18:8784083-8784118
64251 chr12 54894409 54894409 1 + G T OV 54894407 + 54894387 54894427 41 TTGTGGATGTCATGGAATTTCGGGTGAGCTCTCTTGAGCCG TTGTGGATGTCATGGAATTTCGTGTGAGCTCTCTTGAGCCG < 41bp 0.842966762940069 0.551732842817636 0.87435305 0.44242603 prediction 0.582467840244867 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54894407 chr12:54894409 synonymous SNV . 0 23 hm5C_associated_SNPs_55992 0 0 3 DGCR8 POSTAR2 ENCODE chr12:54894398-54894429
64251 chr22 29695604 29695604 1 + G T LIHC 29695602 + 29695582 29695622 41 ACCTTAGGTGGTGATCGTGGCAGAGGTGGCCCTGGTGGCAT ACCTTAGGTGGTGATCGTGGCATAGGTGGCCCTGGTGGCAT < 41bp 0.861262823125702 0.570029868293487 0.8827598 0.7680023 prediction 0.58246590966443 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695602 chr22:29695604 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_55993 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:29695595-29695631
64251 chr6 37138577 37138577 1 + G T DLBC 37138575 + 37138555 37138595 41 AGAAGGAGCCCCTGGAGTCGCAGTACCAGGTGGGCCCGCTA AGAAGGAGCCCCTGGAGTCGCATTACCAGGTGGGCCCGCTA < 41bp 0.856734226021494 0.565502977114147 0.71580493 0.17752317 prediction 0.582462497814693 Functional Loss - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37138575 chr6:37138577 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_55994 0 0 8 BUD13 POSTAR2 ENCODE chr6:37138536-37138592
64251 chr20 49199330 49199330 1 + G T rs185308629 49199328 + 49199308 49199348 41 ACGCCCGACTAGCAGGCATGCCGCGGTAGGTAAGGGCCGCC ACGCCCGACTAGCAGGCATGCCTCGGTAGGTAAGGGCCGCC < 41bp 0.844988117361633 0.553767012555448 0.3669819 0.16721436 prediction 0.58244220961237 Functional Loss - PTPN1 ENSG00000196396 UTR3 Human protein_coding chr20:49199328 chr20:49199330 . . 0 23 hm5C_associated_SNPs_55997 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:49199319-49199353
64251 chr16 24788413 24788413 1 + A C UCEC 24788409 + 24788389 24788429 41 AACAGCAGCAGCCGCAGCAGCAGCAGCCACAGCAGCAGCCA AACAGCAGCAGCCGCAGCAGCAGCCGCCACAGCAGCAGCCA < 41bp 0.79118938425546 0.40936171865557 0.18571699 0.3128596 prediction 0.582378768510921 Functional Loss - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24788409 chr16:24788413 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_56002 0 0 1 SF3B1 POSTAR2 ENCODE chr16:24788384-24788415
64251 chr2 48687006 48687006 1 + G T UCEC 48687003 + 48686983 48687023 41 GCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCAT GCTGTGGTTGACGGTCTCACCCGTAAGTACATGGAAACCAT < 41bp 0.887305304379011 0.596143547872848 0.43343168 0.094444424 prediction 0.582323513012327 Functional Loss - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48687003 chr2:48687006 synonymous SNV . 0 24 hm5C_associated_SNPs_56007 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr2:48687000-48687020
64251 chr7 92888878 92888878 1 + G T STAD 92888875 + 92888855 92888895 41 CCTTAAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCC CCTTAAGGAGGAAGATTATCCAGTAGCTATTCAGTTGTGCC < 41bp 0.791109620663617 0.432047241212625 0.8470806 0.20023581 prediction 0.582219241327234 Functional Loss - VPS50 ENSG00000004766 CDS Human protein_coding chr7:92888875 chr7:92888878 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56012 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr7:92888862-92888883
64251 chr16 67907349 67907349 1 + A C rs534846188 67907345 + 67907325 67907365 41 CAGCTCCCTTAGGACTAGCTCTGGATCCTCCCGGCGGGTAA CAGCTCCCTTAGGACTAGCTCTGGCTCCTCCCGGCGGGTAA < 41bp 0.791108532995691 0.418936341703699 0.6528483 0.35174888 prediction 0.582217065991383 Functional Loss - EDC4 ENSG00000038358 intronic Human protein_coding chr16:67907345 chr16:67907349 . . 0 25 hm5C_associated_SNPs_56013 0 0 1 DGCR8 POSTAR2 ENCODE chr16:67907349-67907380
64251 chr7 120591288 120591288 1 + G T GBM 120591286 + 120591266 120591306 41 GCGAGATGGACCTGCAGGTGCAGAGTAAGTCGGCGCGTCTA GCGAGATGGACCTGCAGGTGCATAGTAAGTCGGCGCGTCTA < 41bp 0.847810923096871 0.556708054895927 0.8490697 0.16226545 prediction 0.582205736401887 Functional Loss - ING3 ENSG00000071243 CDS Human protein_coding chr7:120591286 chr7:120591288 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_56014 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:120591262-120591289
64251 chr9 104307119 104307119 1 + G T UCEC 104307117 + 104307097 104307137 41 CACAGGAGAATATGAGGCTACAGGAATTGACAGATCTTCTT CACAGGAGAATATGAGGCTACATGAATTGACAGATCTTCTT < 41bp 0.849296778496175 0.558257622576549 0.2632123 0.2636522 prediction 0.582078311839253 Functional Loss - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307117 chr9:104307119 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_56019 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:104307114-104307135
64251 chrX 51637834 51637834 1 + G T LUAD 51637831 + 51637811 51637851 41 ACCCCCCTTATTCTCAACTCCGCGATCCGCCTGCCGTCCTG ACCCCCCTTATTCTCAACTCCGCTATCCGCCTGCCGTCCTG < 41bp 0.888850353392818 0.597818972488567 0.38286048 0.089811 prediction 0.582062761808501 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637831 chrX:51637834 nonsynonymous SNV 0.030 1 24 hm5C_associated_SNPs_56022 0 0 2 PCBP2 POSTAR2 ENCODE chrX:51637758-51637840
64251 chr7 881765 881765 1 + G T LUSC 881763 + 881743 881783 41 CAGACCACAGTGGACCACTTCTGGGGTGAGTCCCTGCGAGA CAGACCACAGTGGACCACTTCTTGGGTGAGTCCCTGCGAGA < 41bp 0.791014046402142 0.470978965339339 0.92827725 0.18357894 prediction 0.582028092804284 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:881763 chr7:881765 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_56024 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:881744-881767
64251 chr6 30590648 30590648 1 + G T OV 30590646 + 30590626 30590666 41 GCAATTTGTCTGCGCCCACACGGGTATCATCTTCTATGCTC GCAATTTGTCTGCGCCCACACGTGTATCATCTTCTATGCTC < 41bp 0.80625090920703 0.515241689229427 0.3543362 0.19226637 prediction 0.582018439955207 Functional Loss - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30590646 chr6:30590648 nonsynonymous SNV 0.595 4 23 hm5C_associated_SNPs_56025 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:30590628-30590653
64251 chr1 107600118 107600118 1 + G T LIHC 107600115 + 107600095 107600135 41 TTGCTCAGCTAGAGCTCTCCCGCGCCGGCTTGGAGCAGGAG TTGCTCAGCTAGAGCTCTCCCGCTCCGGCTTGGAGCAGGAG < 41bp 0.791005180295189 0.435005975039588 0.10772541 0.040988952 prediction 0.582010360590378 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600115 chr1:107600118 nonsynonymous SNV 0.030 0 24 hm5C_associated_SNPs_56027 0 0 1 RBM15 POSTAR2 ENCODE chr1:107600054-107600124
64251 chr11 2335797 2335797 1 + G T BLCA 2335794 + 2335774 2335814 41 GTGTCAGGGAGAGGAGGCGGCGAGAGAGGTGAGGGGGGGAC GTGTCAGGGAGAGGAGGCGGCGATAGAGGTGAGGGGGGGAC < 41bp 0.871018918838285 0.580031637195184 0.90052307 0.89126503 prediction 0.5819745632862 Functional Loss - TSPAN32 ENSG00000064201 CDS Human protein_coding chr11:2335794 chr11:2335797 nonsynonymous SNV 0.128 2 24 hm5C_associated_SNPs_56030 0 0 1 SF3B4 POSTAR2 ENCODE chr11:2335794-2335862
64251 chr19 50983403 50983403 1 + G T DLBC 50983400 + 50983380 50983420 41 CTGAATGGCCTGTACCGGGTCCGGATCCCAAGGCGACCCGG CTGAATGGCCTGTACCGGGTCCGTATCCCAAGGCGACCCGG < 41bp 0.790985792391788 0.405977357684953 0.890438 0.1349968 prediction 0.581971584783577 Functional Loss - EMC10 ENSG00000161671 CDS Human protein_coding chr19:50983400 chr19:50983403 synonymous SNV . 0 24 hm5C_associated_SNPs_56032 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:50983400-50983420
64251 chr15 29078433 29078433 1 + G T rs546711525 29078431 + 29078411 29078451 41 TTTACTTGCAGGCCTGAGACCTGGGAGGAAGCTGGAGAAAA TTTACTTGCAGGCCTGAGACCTTGGAGGAAGCTGGAGAAAA < 41bp 0.790975425333756 0.464959502678543 0.85157406 0.47009715 prediction 0.581950850667512 Functional Loss - PDCD6IPP2 ENSG00000261377 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:29078431 chr15:29078433 . . 0 23 hm5C_associated_SNPs_56033 0 0 1 PPIG POSTAR2 ENCODE chr15:29078421-29078453
64251 chr5 74065096 74065096 1 + G T UCEC 74065094 + 74065074 74065114 41 AGAATGATGAAAAGACACCACAGGGAGCAGTACCTGCCTAT AGAATGATGAAAAGACACCACATGGAGCAGTACCTGCCTAT < 41bp 0.82309925544878 0.532128903444321 0.8117164 0.4222846 prediction 0.581940704008919 Functional Loss - NSA2 ENSG00000164346 CDS Human protein_coding chr5:74065094 chr5:74065096 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_56034 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:74065072-74065119
64251 chr8 22465545 22465545 1 + G C UCEC 22465544 + 22465524 22465564 41 ACCTGAACAGATTTCCTGCCCGGGGCCCTCATGGACGGTTG ACCTGAACAGATTTCCTGCCCCGGGCCCTCATGGACGGTTG < 41bp 0.821018972578088 0.530055742295725 0.68710726 0.27880645 prediction 0.581926460564726 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22465544 chr8:22465545 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_56035 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:22465533-22465553
64251 chr7 143078840 143078840 1 + G T LUAD 143078838 + 143078818 143078858 41 GCCCAGCGCGCACAGATGGGCCGGGTGGGCGAGATTCCCCC GCCCAGCGCGCACAGATGGGCCTGGTGGGCGAGATTCCCCC < 41bp 0.790950063958682 0.452889917828307 0.90367854 0.80332875 prediction 0.581900127917365 Functional Loss - ZYX ENSG00000159840 CDS Human protein_coding chr7:143078838 chr7:143078840 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_56039 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:143078821-143078850
64251 chr19 37618621 37618621 1 + A C UCEC 37618617 + 37618597 37618637 41 GCTCACAACTTACCCGACATCAAAAAGTTCATACTGGTGAG GCTCACAACTTACCCGACATCAAACAGTTCATACTGGTGAG < 41bp 0.790934604124232 0.399796888526748 0.08909032 0.030961871 prediction 0.581869208248464 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618617 chr19:37618621 nonsynonymous SNV 0.813 2 25 hm5C_associated_SNPs_56041 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:37618597-37618623
64251 chr12 54448671 54448671 1 + G C CESC 54448670 + 54448650 54448690 41 CGGAGGGGAACCCAAGCGCTCGAGGACAGCCTATACCCGGC CGGAGGGGAACCCAAGCGCTCCAGGACAGCCTATACCCGGC < 41bp 0.79092246443396 0.485216085941089 0.9162352 0.4559994 prediction 0.581844928867919 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448670 chr12:54448671 synonymous SNV . 0 22 hm5C_associated_SNPs_56042 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:54448644-54448681
64251 chr4 7057429 7057429 1 + G T rs111698377 7057427 + 7057407 7057447 41 TTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCC TTCACCGGCGGCAGCAGTTTCATCGTGCAGTTCCCAAACCC < 41bp 0.837068312040538 0.546151947694879 0.64888024 0.1521194 prediction 0.581832728691318 Functional Loss - TADA2B ENSG00000173011 UTR3 Human protein_coding chr4:7057427 chr4:7057429 . . 0 23 hm5C_associated_SNPs_56045 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:7057400-7057440
64251 chr19 9271896 9271896 1 + G T STAD 9271893 + 9271873 9271913 41 AAGACGCACATGCGAAGCCACACGGGGGAGAAACCGTACGA AAGACGCACATGCGAAGCCACACTGGGGAGAAACCGTACGA < 41bp 0.790912576805226 0.409387219927178 0.50691104 0.030953765 prediction 0.581825153610453 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271893 chr19:9271896 synonymous SNV . 0 24 hm5C_associated_SNPs_56047 0 0 1 UCHL5 POSTAR2 ENCODE chr19:9271833-9271906
64251 chr2 62449609 62449609 1 + G T UCEC 62449606 + 62449586 62449626 41 GACCAACCAGACGGGGGAGGCGGGCAGGCTCTCCAATATAA GACCAACCAGACGGGGGAGGCGGTCAGGCTCTCCAATATAA < 41bp 0.790877232193366 0.434819003652665 0.2687596 0.044962674 prediction 0.581754464386731 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449606 chr2:62449609 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_56052 0 0 3 UCHL5 POSTAR2 ENCODE chr2:62449463-62449627
64251 chr6 147680328 147680328 1 + G T COAD 147680325 + 147680305 147680345 41 TCATTTCTGTGAAACGTTTACTCGAAAGACGGACTCGTCCC TCATTTCTGTGAAACGTTTACTCTAAAGACGGACTCGTCCC < 41bp 0.863596839055779 0.572734083227103 0.7492765 0.9369734 prediction 0.581725511657351 Functional Loss - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147680325 chr6:147680328 nonsynonymous SNV 0.944 2 24 hm5C_associated_SNPs_56055 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:147680328-147680329
64251 chr17 38457165 38457165 1 + G T OV 38457162 + 38457142 38457182 41 ATCTCAGAAGTTGATGGTAACAGGATGACCTTGAGCCAAGA ATCTCAGAAGTTGATGGTAACAGTATGACCTTGAGCCAAGA < 41bp 0.887353866950186 0.596507612000506 0.90955126 0.30778992 prediction 0.58169250989936 Functional Loss - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38457162 chr17:38457165 nonsynonymous SNV 0.969 1 24 hm5C_associated_SNPs_56056 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38457126-38457195
64251 chr19 44471457 44471457 1 + A C UCEC 44471453 + 44471433 44471473 41 AGTGTGGGAAGAGATCTACTCAGAATTCACAGCTTCATTTA AGTGTGGGAAGAGATCTACTCAGACTTCACAGCTTCATTTA < 41bp 0.887858628195206 0.597040976071471 0.3834933 0.54076743 prediction 0.581635304247471 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44471453 chr19:44471457 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_56059 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44471428-44471472
64251 chr17 79615069 79615069 1 + G T LUSC 79615067 + 79615047 79615087 41 GCCTGGATGCGGACGCAGCTCAGAGAGTGGTGTACCTGGAG GCCTGGATGCGGACGCAGCTCATAGAGTGGTGTACCTGGAG < 41bp 0.841621808631499 0.550826100247507 0.60519207 0.23836893 prediction 0.581591416767984 Functional Loss - TSPAN10 ENSG00000182612 CDS Human protein_coding chr17:79615067 chr17:79615069 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_56061 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79615025-79615069
64251 chr6 26252136 26252136 1 + G T PRAD 26252133 + 26252113 26252153 41 TCCCGCCTGGCTCATTACAACAAGCGTTCGACCATCACCTC TCCCGCCTGGCTCATTACAACAATCGTTCGACCATCACCTC < 41bp 0.790785528435385 0.429353506187615 0.80158615 0.28764504 prediction 0.581571056870769 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252133 chr6:26252136 nonsynonymous SNV 0.524 2 24 hm5C_associated_SNPs_56062 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:26252110-26252157
64251 chr15 67073688 67073688 1 + A T LUAD 67073684 + 67073664 67073704 41 CGCAAGGTGCCCCCCGGCTACTCCATCAAGGTGTTCGACTT CGCAAGGTGCCCCCCGGCTACTCCTTCAAGGTGTTCGACTT < 41bp 0.8335956386194 0.542812854994366 0.96356356 0.27678943 prediction 0.581565567250068 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073684 chr15:67073688 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_56064 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:67073665-67073693
64251 chr8 38775491 38775491 1 + A T COAD 38775487 + 38775467 38775507 41 AGAACCGAATCTGTGGGTTTCTGGACATCGAGGAGCATGAG AGAACCGAATCTGTGGGTTTCTGGTCATCGAGGAGCATGAG < 41bp 0.827864117504595 0.537103963958588 0.41853932 0.16451052 prediction 0.581520307092014 Functional Loss - PLEKHA2 ENSG00000169499 CDS Human protein_coding chr8:38775487 chr8:38775491 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_56068 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:38775473-38775498
64251 chr10 126172756 126172756 1 + G T rs150798158 126172754 + 126172734 126172774 41 GGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTG GGTTCTGCACCAACGAGTCGCATAAGTCCCGGGCAGAGCTG < 41bp 0.790758053132078 0.450777506154211 0.8563198 0.17882317 prediction 0.581516106264157 Functional Loss - LHPP ENSG00000107902 CDS Human protein_coding chr10:126172754 chr10:126172756 nonsynonymous SNV 0.518 4 23 hm5C_associated_SNPs_56070 0 0 1 PPIG POSTAR2 ENCODE chr10:126172728-126172831
64251 chr17 37687432 37687432 1 + G T STAD 37687430 + 37687410 37687450 41 AAACTATGGGGAGCTGGGGCCAGGAACCACTGGGGCCAGCA AAACTATGGGGAGCTGGGGCCATGAACCACTGGGGCCAGCA < 41bp 0.790743955185713 0.465214078640137 0.88003516 0.29519656 prediction 0.581487910371426 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37687430 chr17:37687432 stopgain 1.000 1 23 hm5C_associated_SNPs_56074 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr17:37687407-37687432
64251 chr16 30194954 30194954 1 + G T rs186185074 30194952 + 30194932 30194972 41 CTTGACAAGAGCATCTTCAGCGGGCGAGTCCCCGGCTCCTC CTTGACAAGAGCATCTTCAGCGTGCGAGTCCCCGGCTCCTC < 41bp 0.790743492679631 0.462248590600684 0.92217076 0.27908522 prediction 0.581486985359263 Functional Loss - CORO1A ENSG00000261416 ncRNA_exonic Human antisense chr16:30194952 chr16:30194954 . . 0 23 hm5C_associated_SNPs_56075 0 0 2 FBL POSTAR2 GSE43666,GSM1067864 chr16:30194935-30194973
64251 chr19 47774742 47774742 1 + G T UCEC 47774740 + 47774720 47774760 41 CCCTGCAGTGAGCAGGCCCACGGAGTCCCCTTCAGTCCGGA CCCTGCAGTGAGCAGGCCCACGTAGTCCCCTTCAGTCCGGA < 41bp 0.790737368243238 0.462278758671854 0.9138522 0.35060802 prediction 0.581474736486476 Functional Loss - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774740 chr19:47774742 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_56078 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:47774740-47774766
64251 chr2 113300106 113300106 1 + G T SARC 113300104 + 113300084 113300124 41 AGCCGGTGGCGGAACCTGCCCAGCGGGCCTAGCCTAAAGCA AGCCGGTGGCGGAACCTGCCCATCGGGCCTAGCCTAAAGCA < 41bp 0.790674967056342 0.484285429179663 0.6102608 0.11266881 prediction 0.581349934112684 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113300104 chr2:113300106 nonsynonymous SNV 0.694 1 23 hm5C_associated_SNPs_56085 0 0 6 DDX3X POSTAR2 ENCODE chr2:113300037-113300158
64251 chr3 180630511 180630511 1 + G T LUSC 180630509 + 180630489 180630529 41 GTGGAGGTTCGCGGCTCTAACGGGGCTTTCTACAAGGTACT GTGGAGGTTCGCGGCTCTAACGTGGCTTTCTACAAGGTACT < 41bp 0.829523793806918 0.538863226037561 0.96809965 0.9435867 prediction 0.581321135538713 Functional Loss - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180630509 chr3:180630511 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56087 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:180630495-180630520
64251 chr1 61869831 61869831 1 + G T LUAD 61869829 + 61869809 61869849 41 TCCCGACATCACCCATTATCCAGCAGCCTGGGCCTTACTTC TCCCGACATCACCCATTATCCATCAGCCTGGGCCTTACTTC < 41bp 0.830470577239047 0.539813542971369 0.12511805 0.015608251 prediction 0.581314068535357 Functional Loss - NFIA ENSG00000162599 CDS Human protein_coding chr1:61869829 chr1:61869831 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56088 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:61869787-61869858
64251 chr19 44636336 44636336 1 + G T UCEC 44636334 + 44636314 44636354 41 AGTGTGGGAAAAGATTTACTCAGAATTCACAACTTTATTCT AGTGTGGGAAAAGATTTACTCATAATTCACAACTTTATTCT < 41bp 0.7906435390586 0.475229114411502 0.31150806 0.07747701 prediction 0.5812870781172 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44636334 chr19:44636336 nonsynonymous SNV 0.508 0 23 hm5C_associated_SNPs_56089 0 0 9 LIN28B POSTAR2 GSE44616,GSM1087850 chr19:44636320-44636340
64251 chr19 41088331 41088331 1 + G T COAD 41088329 + 41088309 41088349 41 GCTCATTGCTACAAGCCACACAGGGCGCATCGGGGTGTGGA GCTCATTGCTACAAGCCACACATGGCGCATCGGGGTGTGGA < 41bp 0.79064306043762 0.447702494219517 0.15620002 0.0032354593 prediction 0.581286120875239 Functional Loss - SHKBP1 ENSG00000160410;ENSG00000160410 exonic;splicing Human other chr19:41088329 chr19:41088331 nonsynonymous SNV 0.198 3 23 hm5C_associated_SNPs_56090 0 0 1 DDX24 POSTAR2 ENCODE chr19:41088306-41088347
64251 chr19 4409420 4409420 1 + G T LIHC 4409418 + 4409398 4409438 41 AATGTTCGCCACGGAGCTGCCCGGAGCTGACGAGTGGCCCG AATGTTCGCCACGGAGCTGCCCTGAGCTGACGAGTGGCCCG < 41bp 0.860728632739138 0.570085633770044 0.80174273 0.09097716 prediction 0.581285997938188 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409418 chr19:4409420 synonymous SNV . 0 23 hm5C_associated_SNPs_56091 0 0 23 FMR1 POSTAR2 GSE39682,GSM977616 chr19:4409397-4409421
64251 chr1 76216217 76216217 1 + A T LUAD 76216213 + 76216193 76216233 41 GCCCTGGAAAGGAAAACTTTCGGAAAGCTACTTGTAGAGGT GCCCTGGAAAGGAAAACTTTCGGATAGCTACTTGTAGAGGT < 41bp 0.80039027081825 0.509769958244732 0.82239974 0.83440757 prediction 0.581240625147036 Functional Loss - ACADM ENSG00000117054 CDS Human protein_coding chr1:76216213 chr1:76216217 stopgain 0.925 1 25 hm5C_associated_SNPs_56095 0 0 1 PRPF8 POSTAR2 ENCODE chr1:76216211-76216271
64251 chr17 16285361 16285361 1 + G T LUSC 16285358 + 16285338 16285378 41 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATG CCAGCAGAGGCTCATCTTTGCAGTCAAGCAGCTGGAAGATG < 41bp 0.790616361861199 0.403453014322492 0.9107732 0.53110814 prediction 0.581232723722398 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285358 chr17:16285361 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_56096 0 0 28 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:16285300-16285380
64251 chr9 2115837 2115837 1 + G T LUAD 2115834 + 2115814 2115854 41 CCAAACAGGATCTGCAGGCCCAAGACCGAGCTCACCGCATC CCAAACAGGATCTGCAGGCCCAATACCGAGCTCACCGCATC < 41bp 0.790609978986257 0.418849154941227 0.2211838 0.061338812 prediction 0.581219957972514 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115834 chr9:2115837 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_56098 0 0 2 GRWD1 POSTAR2 ENCODE chr9:2115821-2115883
64251 chr9 2115838 2115838 1 + A C TGCT 2115834 + 2115814 2115854 41 CCAAACAGGATCTGCAGGCCCAAGACCGAGCTCACCGCATC CCAAACAGGATCTGCAGGCCCAAGCCCGAGCTCACCGCATC < 41bp 0.790609978986257 0.40217960536714 0.2211838 0.16122028 prediction 0.581219957972514 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115834 chr9:2115838 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_56099 0 0 2 GRWD1 POSTAR2 ENCODE chr9:2115821-2115883
64251 chr11 8013706 8013706 1 + G T LUSC 8013703 + 8013683 8013723 41 TTTCTCCAAATGAGCTCATCCTGGGCTGGTAAGTTGGGGAG TTTCTCCAAATGAGCTCATCCTGTGCTGGTAAGTTGGGGAG < 41bp 0.790597214803569 0.412529644644898 0.42399883 0.11657587 prediction 0.581194429607139 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8013703 chr11:8013706 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_56102 0 0 3 IGF2BP1 POSTAR2 ENCODE chr11:8013680-8013711
64251 chr19 45912587 45912587 1 + G T STAD 45912585 + 45912565 45912605 41 GGGGAGGGACAGCCTGAAGCCAGGGCAACTCCGGGATCCAC GGGGAGGGACAGCCTGAAGCCATGGCAACTCCGGGATCCAC < 41bp 0.854340516012801 0.563768466924966 0.8971149 0.13550985 prediction 0.581144098175671 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45912585 chr19:45912587 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_56108 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45912561-45912605
64251 chr5 94936650 94936650 1 + A T LUSC 94936646 + 94936626 94936666 41 ATGAACATAAAGTCAAAAACCTGCATCCACCCTGGATTCTG ATGAACATAAAGTCAAAAACCTGCTTCCACCCTGGATTCTG < 41bp 0.79056505031146 0.474185179711043 0.035374403 0.021206439 prediction 0.58113010062292 Functional Loss - ARSK ENSG00000164291 CDS Human protein_coding chr5:94936646 chr5:94936650 nonsynonymous SNV 0.023 1 25 hm5C_associated_SNPs_56109 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr5:94936624-94936662
64251 chr15 40757633 40757633 1 + A T LUAD 40757629 + 40757609 40757649 41 GTGCTGACTTTTGCCGAGTACTGCAGGTAGGTGGTTCCCTG GTGCTGACTTTTGCCGAGTACTGCTGGTAGGTGGTTCCCTG < 41bp 0.790544000718848 0.470107116855979 0.5332524 0.37758476 prediction 0.581088001437696 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40757629 chr15:40757633 nonsynonymous SNV 0.980 5 25 hm5C_associated_SNPs_56113 0 0 2 PRPF8 POSTAR2 ENCODE chr15:40757621-40757678
64251 chr12 121659964 121659964 1 + G T UCEC 121659962 + 121659942 121659982 41 GCCGGCTCTGCCGGCACCCACAGCAACGGTACGAGCTTGTG GCCGGCTCTGCCGGCACCCACATCAACGGTACGAGCTTGTG < 41bp 0.790538942482473 0.464199683814974 0.39472923 0.09310961 prediction 0.581077884964946 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659962 chr12:121659964 nonsynonymous SNV 0.589 4 23 hm5C_associated_SNPs_56115 0 0 1 PRPF8 POSTAR2 ENCODE chr12:121659889-121660036
64251 chr1 226016570 226016570 1 + G T UCEC 226016568 + 226016548 226016588 41 TCCGCAGCCAGGGAGGACGACAGCATCCGCCCTTTCAAGGT TCCGCAGCCAGGGAGGACGACATCATCCGCCCTTTCAAGGT < 41bp 0.85939210216711 0.568866027872234 0.25498736 0.13657632 prediction 0.581052148589754 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016568 chr1:226016570 nonsynonymous SNV 0.918 1 23 hm5C_associated_SNPs_56118 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:226016537-226016595
64251 chr10 99968340 99968340 1 + G T COAD 99968338 + 99968318 99968358 41 AGTTGAAACTACGGATGTGACAGGACATGAGAGGATACTTC AGTTGAAACTACGGATGTGACATGACATGAGAGGATACTTC < 41bp 0.821731531445911 0.531253979930562 0.23394242 0.18982613 prediction 0.580955103030699 Functional Loss - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99968338 chr10:99968340 stopgain 0.004 0 23 hm5C_associated_SNPs_56125 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:99968320-99968340
64251 chr12 133727670 133727670 1 + G T SARC 133727668 + 133727648 133727688 41 TCACCAGGGAGGAGTGGAAGCTGCTGGACACTGCTCAGCAG TCACCAGGGAGGAGTGGAAGCTTCTGGACACTGCTCAGCAG < 41bp 0.836135231843778 0.545675955651858 0.22078016 0.067655414 prediction 0.58091855238384 Functional Loss - ZNF10 ENSG00000090612;ENSG00000256223;ENSG00000256825 CDS Human other chr12:133727668 chr12:133727670 synonymous SNV . 0 23 hm5C_associated_SNPs_56127 0 0 1 ZNF622 POSTAR2 ENCODE chr12:133727613-133727709
64251 chr8 55047945 55047945 1 + G T COAD 55047942 + 55047922 55047962 41 TTAAAGCCGAATCCCGGCTCCAAGAAACCGGTAAATGGGTG TTAAAGCCGAATCCCGGCTCCAATAAACCGGTAAATGGGTG < 41bp 0.873990201737624 0.583535460116379 0.33874255 0.18953896 prediction 0.58090948324249 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55047942 chr8:55047945 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_56128 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:55047916-55047945
64251 chr17 42255003 42255003 1 - T G SKCM 42255007 - 42254987 42255027 41 ATTAAGCAGGACTTCCAGGGCCCGAGGGAAGTTGGCGCAGT ATTAAGCAGGACTTCCAGGGCCCGCGGGAAGTTGGCGCAGT < 41bp 0.790423630247297 0.399670927600726 0.70306855 0.8139123 prediction 0.580847260494593 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42255007 chr17:42255003 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_56132 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:42254951-42255037
64251 chr19 37870038 37870038 1 + G T LUSC 37870036 + 37870016 37870056 41 TTTCAGGGGTTGGTGACCTTCAGAGATGTGGCGCTAGACTT TTTCAGGGGTTGGTGACCTTCATAGATGTGGCGCTAGACTT < 41bp 0.84679265390775 0.556383294144293 0.8927051 0.4066913 prediction 0.580818719526913 Functional Loss - ZNF527 ENSG00000189164 CDS Human protein_coding chr19:37870036 chr19:37870038 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_56135 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:37870026-37870057
64251 chr9 117005815 117005815 1 + G T LUAD 117005812 + 117005792 117005832 41 GCCTGGCAGGAAGGGGTTTCCTGGGAGGCCCGGCCTGGATG GCCTGGCAGGAAGGGGTTTCCTGTGAGGCCCGGCCTGGATG < 41bp 0.883366730156191 0.592980722889877 0.9124783 0.38405764 prediction 0.580772014532629 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117005812 chr9:117005815 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_56138 0 0 12 BUD13 POSTAR2 ENCODE chr9:117005801-117005830
64251 chr7 50444360 50444360 1 + G T COAD 50444358 + 50444338 50444378 41 GAGAAAATGAATGGCTCCCACAGGGACCAAGGCAGCTCGGC GAGAAAATGAATGGCTCCCACATGGACCAAGGCAGCTCGGC < 41bp 0.792831525261364 0.502461094789148 0.88228416 0.5673683 prediction 0.580740860944431 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50444358 chr7:50444360 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_56140 0 0 5 DDX24 POSTAR2 ENCODE chr7:50444261-50444365
64251 chr2 157407203 157407203 1 + G T UCEC 157407201 + 157407181 157407221 41 CAAAATGGATGATAAAGACGCAGCAGCTATCTGCCAGCCAA CAAAATGGATGATAAAGACGCATCAGCTATCTGCCAGCCAA < 41bp 0.79034097007841 0.460562371354623 0.23344886 0.072399884 prediction 0.580681940156821 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407201 chr2:157407203 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_56143 0 0 1 FXR2 POSTAR2 ENCODE chr2:157407144-157407239
64251 chr3 119232541 119232541 1 + G T GBM 119232539 + 119232519 119232559 41 AGGCCTGCGTGGCCTGGTGGCTGGTGGCATAATTGGAGCCT AGGCCTGCGTGGCCTGGTGGCTTGTGGCATAATTGGAGCCT < 41bp 0.790306172916608 0.458557814565021 0.8898338 0.6763822 prediction 0.580612345833217 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119232539 chr3:119232541 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_56146 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:119232517-119232546
64251 chrX 133609230 133609230 1 + G T LUSC 133609227 + 133609207 133609247 41 GTAGGACTGAACGTCTTGCTCGAGATGTGATGAAGGAGATG GTAGGACTGAACGTCTTGCTCGATATGTGATGAAGGAGATG < 41bp 0.889391176423696 0.599112930391139 0.8856745 0.3436854 prediction 0.580556492065113 Functional Loss - HPRT1 ENSG00000165704 CDS Human protein_coding chrX:133609227 chrX:133609230 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_56152 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:133609200-133609270
64251 chr11 86518702 86518702 1 + G T LUAD 86518699 + 86518679 86518719 41 GCTCGGCATGGCAGGGATTCCAGGGCTCCTCTTCCTTCTCT GCTCGGCATGGCAGGGATTCCAGTGCTCCTCTTCCTTCTCT < 41bp 0.884767545816062 0.594490749389066 0.92050326 0.21049586 prediction 0.580553592853991 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518699 chr11:86518702 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_56153 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:86518677-86518726
64251 chrX 54841723 54841723 1 + G T LUAD 54841720 + 54841700 54841740 41 AGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGAT AGGAATGGGCAGCTCAGTACCGATAGGCGATGGAAGCGGAT < 41bp 0.883911466812918 0.593650101233573 0.89948666 0.31195882 prediction 0.580522731158691 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841720 chrX:54841723 stopgain 1.000 1 24 hm5C_associated_SNPs_56157 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:54841698-54841729
64251 chr15 75949693 75949693 1 + G T rs542014058 75949690 + 75949670 75949710 41 TAAGCGGCCTGTCCTGCCTCCTGGGAGAAGGAGCTTTCAAG TAAGCGGCCTGTCCTGCCTCCTGTGAGAAGGAGCTTTCAAG < 41bp 0.790251451005313 0.413278310648368 0.82335013 0.36765197 prediction 0.580502902010626 Functional Loss - SNX33 ENSG00000173548 UTR3 Human protein_coding chr15:75949690 chr15:75949693 . . 0 24 hm5C_associated_SNPs_56159 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:75949688-75949710
64251 chr3 44673645 44673645 1 + G T UCEC 44673642 + 44673622 44673662 41 CCTTTCCCAGGAAGAGAACCCAAGAAATCAATTAATGGCAC CCTTTCCCAGGAAGAGAACCCAATAAATCAATTAATGGCAC < 41bp 0.88583883932596 0.595632504069631 0.84615767 0.69888926 prediction 0.580412670512657 Functional Loss - ZNF197;ZNF660-ZNF197 ENSG00000186448 CDS Human protein_coding chr3:44673642 chr3:44673645 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_56162 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:44673618-44673650
64251 chr22 29446437 29446437 1 + G T UCEC 29446435 + 29446415 29446455 41 AGCCCCAGTCAGGAAGCTCCCAGGGCTTGTACGGCCTTCAC AGCCCCAGTCAGGAAGCTCCCATGGCTTGTACGGCCTTCAC < 41bp 0.864796939120773 0.574592124751344 0.92183465 0.8042531 prediction 0.580409628738857 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446435 chr22:29446437 nonsynonymous SNV 0.784 2 23 hm5C_associated_SNPs_56163 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29446430-29446459
64251 chr2 198334873 198334873 1 + G T COAD 198334870 + 198334850 198334890 41 CCCAGGTCTTCCTGGCTACCCAAGAACTTGTACCTTGGATT CCCAGGTCTTCCTGGCTACCCAATAACTTGTACCTTGGATT < 41bp 0.790172496557497 0.418266763661364 0.36087108 0.19266683 prediction 0.580344993114994 Functional Loss - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198334870 chr2:198334873 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56165 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:198334824-198334873
64251 chr6 31526067 31526067 1 + G T TGCT 31526064 + 31526044 31526084 41 GCTCTAGGGGACCGAGAACCCAAGCCAACCAGGGCCGGGCC GCTCTAGGGGACCGAGAACCCAATCCAACCAGGGCCGGGCC < 41bp 0.790147024438623 0.475975542300243 0.3217568 0.20505512 prediction 0.580294048877246 Functional Loss - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31526064 chr6:31526067 nonsynonymous SNV 0.796 0 24 hm5C_associated_SNPs_56168 0 0 1 PPIG POSTAR2 ENCODE chr6:31526013-31526071
64251 chr8 144681088 144681088 1 + G T LGG 144681086 + 144681066 144681106 41 GTTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTACCTGC GTTCTTTGAGGAATTTGTCCCATGCGTCAAACGCTACCTGC < 41bp 0.790133538359354 0.469659256215071 0.9218535 0.781417 prediction 0.580267076718708 Functional Loss - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681086 chr8:144681088 nonsynonymous SNV 0.500 0 23 hm5C_associated_SNPs_56171 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:144681080-144681100
64251 chr1 149858739 149858739 1 + G T LUAD 149858736 + 149858716 149858756 41 GGAGCTGGCGGGCAACGCGGCTCGGGACAACAAGAAGACGC GGAGCTGGCGGGCAACGCGGCTCTGGACAACAAGAAGACGC < 41bp 0.880413204108085 0.590300521512074 0.057913452 0.026023686 prediction 0.580225365192021 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858736 chr1:149858739 nonsynonymous SNV 0.837 2 24 hm5C_associated_SNPs_56172 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr1:149858695-149858742
64251 chr5 145634590 145634590 1 + G T UCEC 145634587 + 145634567 145634607 41 TCAGTACAGACAGTTCTTTTCAAGAACTCAGACACAGCGTC TCAGTACAGACAGTTCTTTTCAATAACTCAGACACAGCGTC < 41bp 0.790107391352467 0.426225834800644 0.53831625 0.07172519 prediction 0.580214782704933 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145634587 chr5:145634590 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56173 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:145634551-145634636
64251 chr10 101716274 101716274 1 - C A LUAD 101716277 - 101716257 101716297 41 CCCCAGGAAGGCAGCCTTGCCAGGATCCCGGAAACTTCTTT CCCCAGGAAGGCAGCCTTGCCAGTATCCCGGAAACTTCTTT < 41bp 0.79007180279013 0.429653413833856 0.34121972 0.054044932 prediction 0.580143605580259 Functional Loss - DNMBP ENSG00000107554 CDS Human protein_coding chr10:101716277 chr10:101716274 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_56174 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:101716256-101716278
64251 chr6 111213519 111213519 1 + A T LUSC 111213515 + 111213495 111213535 41 TATTTAGGTACTTATATACTCTGGATTTCCCAGAGAGTCGG TATTTAGGTACTTATATACTCTGGTTTTCCCAGAGAGTCGG < 41bp 0.806838727900798 0.516776219579646 0.12646064 0.18741712 prediction 0.580125016642304 Functional Loss - AMD1 ENSG00000123505 CDS Human protein_coding chr6:111213515 chr6:111213519 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_56177 0 0 41 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:111213495-111213530
64251 chr19 49100047 49100047 1 + G T LUSC 49100044 + 49100024 49100064 41 GTGGGTTCCTGGGCCGTCCGCTGGGCAAGGAGGCACTGGGC GTGGGTTCCTGGGCCGTCCGCTGTGCAAGGAGGCACTGGGC < 41bp 0.904559140544882 0.614519416939283 0.77142835 0.25065738 prediction 0.580079447211199 Functional Loss - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100044 chr19:49100047 nonsynonymous SNV 0.221 2 24 hm5C_associated_SNPs_56181 0 0 1 SF3B1 POSTAR2 ENCODE chr19:49100033-49100070
64251 chr19 36273517 36273517 1 + G T LUAD 36273515 + 36273495 36273535 41 TCAGGAGGCCATGTCAGTGCCTGGGGAGGAGGAGCGTCTGG TCAGGAGGCCATGTCAGTGCCTTGGGAGGAGGAGCGTCTGG < 41bp 0.860857540098133 0.570831368327591 0.78486156 0.613521 prediction 0.580052343541084 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36273515 chr19:36273517 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_56188 0 0 3 DDX24 POSTAR2 ENCODE chr19:36273498-36273578
64251 chr12 110345418 110345418 1 + G T COAD 110345416 + 110345396 110345436 41 GGCGCTAGAAAGGATGAAAGCTGAAGAGGAGAGGAGGCAGC GGCGCTAGAAAGGATGAAAGCTTAAGAGGAGAGGAGGCAGC < 41bp 0.853849064174035 0.563835281161973 0.7016336 0.5087951 prediction 0.580027566024124 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110345416 chr12:110345418 stopgain 0.364 1 23 hm5C_associated_SNPs_56190 0 0 6 FASTKD2 POSTAR2 ENCODE chr12:110345384-110345437
64251 chr9 71863171 71863171 1 + G T PAAD 71863169 + 71863149 71863189 41 AGGCAGGCCACGGGCAGGAACAGGAGAGCCTGGTGTTTTCC AGGCAGGCCACGGGCAGGAACATGAGAGCCTGGTGTTTTCC < 41bp 0.790012448502886 0.45156466698082 0.897575 0.64903235 prediction 0.580024897005773 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71863169 chr9:71863171 stopgain 0.013 0 23 hm5C_associated_SNPs_56192 0 0 4 BUD13 POSTAR2 ENCODE chr9:71863089-71863185
64251 chr16 25162906 25162906 1 + G T CESC 25162903 + 25162883 25162923 41 CTCCCCTATCCAGCCCCATTCTAGAACTGCATTCAGAGGAC CTCCCCTATCCAGCCCCATTCTATAACTGCATTCAGAGGAC < 41bp 0.789959980847447 0.405168758848195 0.25231534 0.1442635 prediction 0.579919961694894 Functional Loss - LCMT1 ENSG00000205629 CDS Human protein_coding chr16:25162903 chr16:25162906 stopgain 0.884 1 24 hm5C_associated_SNPs_56202 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:25162894-25162926
64251 chr17 42818802 42818802 1 + G C LUSC 42818798 + 42818778 42818818 41 CCTTTGAGGCCCCGACGACCCTGGGCAGCATGCACCATACC CCTTTGAGGCCCCGACGACCCTGGCCAGCATGCACCATACC < 41bp 0.791341367850272 0.50139558641367 0.7678919 0.52310103 prediction 0.579891562873205 Functional Loss - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42818798 chr17:42818802 nonsynonymous SNV 0.022 0 25 hm5C_associated_SNPs_56206 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42818794-42818820
64251 chr19 5040020 5040020 1 + G T UCEC 5040017 + 5039997 5040037 41 TACCGCCGCCTGGCCAACAGCGAGAAGTACGCGGGGCGGGC TACCGCCGCCTGGCCAACAGCGATAAGTACGCGGGGCGGGC < 41bp 0.789907976433027 0.416058303053931 0.84691095 0.7079078 prediction 0.579815952866054 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5040017 chr19:5040020 nonsynonymous SNV 0.875 1 24 hm5C_associated_SNPs_56211 0 0 4 BUD13 POSTAR2 ENCODE chr19:5039982-5040032
64251 chr12 125834587 125834587 1 + G T UCEC 125834584 + 125834564 125834604 41 CCAGCCCTGCTCGGGGGCACCACGATGGAGCTCTTCTTCAC CCAGCCCTGCTCGGGGGCACCACTATGGAGCTCTTCTTCAC < 41bp 0.880096300014714 0.590223413336548 0.58374155 0.43938416 prediction 0.57974577335633 Functional Loss - TMEM132B ENSG00000139364 CDS Human protein_coding chr12:125834584 chr12:125834587 synonymous SNV . 0 24 hm5C_associated_SNPs_56215 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:125834580-125834605
64251 chr6 17601330 17601330 1 + G T LUAD 17601327 + 17601307 17601347 41 TCCGCAGCCCCTTCGCGAAGCCCGAGCGAGACCGGGCGACA TCCGCAGCCCCTTCGCGAAGCCCTAGCGAGACCGGGCGACA < 41bp 0.789846980990218 0.421324757585659 0.100093216 0.01907754 prediction 0.579693961980436 Functional Loss - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17601327 chr6:17601330 synonymous SNV . 0 24 hm5C_associated_SNPs_56218 0 0 1 RPS3 POSTAR2 ENCODE chr6:17601163-17601344
64251 chr22 19495305 19495305 1 + G T SARC 19495302 + 19495282 19495322 41 TTTCCAGTCTTCCCCTGAAGCAGGTGAAGCAGAAGTTCCAG TTTCCAGTCTTCCCCTGAAGCAGTTGAAGCAGAAGTTCCAG < 41bp 0.789821595499067 0.395542825594208 0.92995805 0.35759458 prediction 0.579643190998134 Functional Loss - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19495302 chr22:19495305 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_56221 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:19495302-19495331
64251 chr3 30729974 30729974 1 + G T UCEC 30729972 + 30729952 30729992 41 GTTGAGAGATCGAGGGCGACCAGAAATTCCCAGCTTCTGGC GTTGAGAGATCGAGGGCGACCATAAATTCCCAGCTTCTGGC < 41bp 0.850970979988517 0.561153777416129 0.80177355 0.29362524 prediction 0.579634405144777 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30729972 chr3:30729974 stopgain 0.996 1 23 hm5C_associated_SNPs_56222 1 0 1 DGCR8 POSTAR2 ENCODE chr3:30729934-30730000
64251 chr1 54359925 54359925 1 + G T UCEC 54359922 + 54359902 54359942 41 GGGCTGTGGCTGAAGAGGCTCTGGGTGCTCTTGGAGGTGGC GGGCTGTGGCTGAAGAGGCTCTGTGTGCTCTTGGAGGTGGC < 41bp 0.885700396066993 0.595915177100331 0.29993346 0.081193894 prediction 0.579570437933324 Functional Loss - DIO1 ENSG00000211452 CDS Human protein_coding chr1:54359922 chr1:54359925 nonsynonymous SNV 0.381 1 24 hm5C_associated_SNPs_56226 0 0 3 DDX3X POSTAR2 ENCODE chr1:54359865-54359963
64251 chr17 32962028 32962028 1 + G T UCEC 32962026 + 32962006 32962046 41 ACCTAGTCAGTGACTTCATGCGGGTGGGCGATCCCCGAGTG ACCTAGTCAGTGACTTCATGCGTGTGGGCGATCCCCGAGTG < 41bp 0.857580367659448 0.567808959330854 0.7995973 0.21454942 prediction 0.57954281665719 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32962026 chr17:32962028 synonymous SNV . 0 23 hm5C_associated_SNPs_56230 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:32962012-32962032
64251 chr1 26597551 26597551 1 + G T LGG 26597549 + 26597529 26597569 41 GGAGACCAGTGGAGAAGGTCCAGAAGTGGAAATGGAGTCCT GGAGACCAGTGGAGAAGGTCCATAAGTGGAAATGGAGTCCT < 41bp 0.846088788823323 0.556328856029132 0.23874804 0.13691473 prediction 0.579519865588382 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26597549 chr1:26597551 stopgain 0.607 0 23 hm5C_associated_SNPs_56233 0 0 15 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:26597540-26597560
64251 chr10 121662335 121662335 1 + G T rs34157476 121662333 + 121662313 121662353 41 TCCTTCTTCAGTGCAGTCACCGGCACAGCAGCAGGTACCTG TCCTTCTTCAGTGCAGTCACCGTCACAGCAGCAGGTACCTG < 41bp 0.789707392555833 0.455993021286905 0.41958454 0.26165968 prediction 0.579414785111666 Functional Loss - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121662333 chr10:121662335 nonsynonymous SNV 0.014 0 23 hm5C_associated_SNPs_56241 0 0 1 PPIG POSTAR2 ENCODE chr10:121662308-121662373
64251 chr21 47423907 47423907 1 + A C COAD 47423903 + 47423883 47423923 41 GGTGTCTTCCACCAGACAGTCTCCAGGAAGGTGGCGCTGGG GGTGTCTTCCACCAGACAGTCTCCCGGAAGGTGGCGCTGGG < 41bp 0.789689694420179 0.372257838499814 0.9553565 0.07016075 prediction 0.579379388840358 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47423903 chr21:47423907 synonymous SNV . 0 25 hm5C_associated_SNPs_56243 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:47423897-47423936
64251 chr13 113773108 113773108 1 + G T LUAD 113773106 + 113773086 113773126 41 TGTGCCGGCTACTCGGATGGCAGCAAGGACTCCTGCAAGGG TGTGCCGGCTACTCGGATGGCATCAAGGACTCCTGCAAGGG < 41bp 0.789685328762941 0.462096802914533 0.27572286 0.1789383 prediction 0.579370657525882 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113773106 chr13:113773108 nonsynonymous SNV 0.539 1 23 hm5C_associated_SNPs_56244 0 0 4 DDX55 POSTAR2 ENCODE chr13:113773096-113773212
64251 chr1 28800619 28800619 1 + G T LUAD 28800617 + 28800597 28800637 41 TTTCTGAGGACAGCAGTACGCTGGGTCGGACCAGGTCTCTT TTTCTGAGGACAGCAGTACGCTTGGTCGGACCAGGTCTCTT < 41bp 0.7896692647225 0.466688190265333 0.18001369 0.048514277 prediction 0.579338529444999 Functional Loss - PHACTR4 ENSG00000204138 CDS Human protein_coding chr1:28800617 chr1:28800619 synonymous SNV . 0 23 hm5C_associated_SNPs_56246 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28800598-28800636
64251 chr1 155533065 155533065 1 + G T UCEC 155533063 + 155533043 155533083 41 GCAGGACCGCTGCTGTGGAGCTGGTCGCAGGCGGTGTGTGC GCAGGACCGCTGCTGTGGAGCTTGTCGCAGGCGGTGTGTGC < 41bp 0.789655989618309 0.476775816764405 0.16522437 0.12761548 prediction 0.579311979236618 Functional Loss - ASH1L-AS1 ENSG00000235919 ncRNA_exonic Human antisense chr1:155533063 chr1:155533065 . . 0 23 hm5C_associated_SNPs_56247 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr1:155533050-155533075
64251 chr11 64855517 64855517 1 + G T ACC 64855515 + 64855495 64855535 41 CCCTCATGTCTCGCCTAGGCCGGGCCGCAGCTGACAGCGAT CCCTCATGTCTCGCCTAGGCCGTGCCGCAGCTGACAGCGAT < 41bp 0.789650496436347 0.471469444176407 0.4893666 0.1480932 prediction 0.579300992872694 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855515 chr11:64855517 synonymous SNV . 0 23 hm5C_associated_SNPs_56248 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:64855480-64855526
64251 chr10 76789262 76789262 1 + G T OV 76789260 + 76789240 76789280 41 GCGAACAGGACGACACCTTTCAGGATTGTGCCGAGACTCAA GCGAACAGGACGACACCTTTCATGATTGTGCCGAGACTCAA < 41bp 0.813364745443357 0.523731852204043 0.88307023 0.42570573 prediction 0.579265786478628 Functional Loss - KAT6B ENSG00000156650 CDS Human protein_coding chr10:76789260 chr10:76789262 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_56250 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr10:76789240-76789270
64251 chr22 30077528 30077528 1 + G T BLCA 30077525 + 30077505 30077545 41 TGAAAGAGAGGGAGACAGCTCTGGATATTCTGCACAATGAG TGAAAGAGAGGGAGACAGCTCTGTATATTCTGCACAATGAG < 41bp 0.789617819697188 0.443442793163599 0.20421705 0.1012018 prediction 0.579235639394375 Functional Loss - NF2 ENSG00000186575 CDS Human protein_coding chr22:30077525 chr22:30077528 nonsynonymous SNV 0.915 3 24 hm5C_associated_SNPs_56254 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr22:30077520-30077540
64251 chr16 47622868 47622868 1 + A T BLCA 47622864 + 47622844 47622884 41 TCAGTTATCCTGCATTTGCCCTGGATGATGAAGTTCTTTTT TCAGTTATCCTGCATTTGCCCTGGTTGATGAAGTTCTTTTT < 41bp 0.789615973971384 0.478775246805368 0.31017792 0.20586559 prediction 0.579231947942767 Functional Loss - PHKB ENSG00000102893 CDS Human protein_coding chr16:47622864 chr16:47622868 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_56255 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:47622857-47622874
64251 chr16 89704477 89704477 1 + G T LUSC 89704475 + 89704455 89704495 41 CCCAGGCCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCC CCCAGGCCAGCAACCTCACACATGCTCCCGAGGAGGAGCCC < 41bp 0.789613713867394 0.455014682232887 0.8677836 0.35109115 prediction 0.579227427734788 Functional Loss - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89704475 chr16:89704477 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_56256 0 0 2 LARP4 POSTAR2 ENCODE chr16:89704461-89704498
64251 chr19 46181246 46181246 1 + G C rs561341259 46181245 + 46181225 46181265 41 AAATGCGCTGCCGGGATTACCGGCTGAGGTGAGGGCATGCG AAATGCGCTGCCGGGATTACCCGCTGAGGTGAGGGCATGCG < 41bp 0.806453103354072 0.516849839159558 0.8906213 0.32256734 prediction 0.579206528389027 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46181245 chr19:46181246 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_56257 0 0 1 U2AF2 POSTAR2 ENCODE chr19:46181155-46181252
64251 chr4 59431 59431 1 + A T HNSC 59427 + 59407 59447 41 AGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCT AGAGATGTGATGTTGGAGAACTACTGGAACCTGGTCTCCCT < 41bp 0.789599109806028 0.475850662763347 0.87829185 0.08522165 prediction 0.579198219612056 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59427 chr4:59431 nonsynonymous SNV 0.628 3 25 hm5C_associated_SNPs_56259 0 0 6 GEMIN5 POSTAR2 ENCODE chr4:59400-59451
64251 chr22 32881139 32881139 1 + G C LIHC 32881138 + 32881118 32881158 41 CAGTACATGCATCCTCTCTGCGAGGGCAGCTCCGCTACTCT CAGTACATGCATCCTCTCTGCCAGGGCAGCTCCGCTACTCT < 41bp 0.78959905296834 0.497165724815606 0.90882385 0.8989569 prediction 0.57919810593668 Functional Loss - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32881138 chr22:32881139 nonsynonymous SNV 0.969 2 22 hm5C_associated_SNPs_56260 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32881114-32881187
64251 chr19 15791088 15791088 1 + G T LUSC 15791085 + 15791065 15791105 41 CCCAAGGATAATCTCTTCATCAGGTTCCTGAAGCCCTGGCT CCCAAGGATAATCTCTTCATCAGTTTCCTGAAGCCCTGGCT < 41bp 0.789566143898461 0.397687660172454 0.81474125 0.10851598 prediction 0.579132287796922 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15791085 chr19:15791088 nonsynonymous SNV 0.117 0 24 hm5C_associated_SNPs_56264 0 0 2 PPIG POSTAR2 ENCODE chr19:15791067-15791108
64251 chr12 19283064 19283064 1 + G T COAD 19283062 + 19283042 19283082 41 CGGACACCGGCGGCAGAGCACAGGTAACGCCGGGCCCAAAC CGGACACCGGCGGCAGAGCACATGTAACGCCGGGCCCAAAC < 41bp 0.837214010075293 0.547668145150271 0.71632195 0.3833752 prediction 0.579091729850043 Functional Loss - PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19283062 chr12:19283064 nonsynonymous SNV 0.975 3 23 hm5C_associated_SNPs_56269 0 0 3 BUD13 POSTAR2 ENCODE chr12:19283022-19283117
64251 chr12 104458418 104458418 1 + G C LUAD 104458417 + 104458397 104458437 41 CCCGCGCCCGGCACGGACACCGAGCGGTGGCCATCCGGGAG CCCGCGCCCGGCACGGACACCCAGCGGTGGCCATCCGGGAG < 41bp 0.789530536482834 0.496093191487054 0.8195883 0.41957843 prediction 0.579061072965669 Functional Loss - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104458417 chr12:104458418 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_56275 0 0 1 EIF3H POSTAR2 ENCODE chr12:104458314-104458426
64251 chr12 104458420 104458420 1 + G T UCEC 104458417 + 104458397 104458437 41 CCCGCGCCCGGCACGGACACCGAGCGGTGGCCATCCGGGAG CCCGCGCCCGGCACGGACACCGATCGGTGGCCATCCGGGAG < 41bp 0.789530536482834 0.421394153007605 0.8195883 0.14705327 prediction 0.579061072965669 Functional Loss - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104458417 chr12:104458420 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_56276 0 0 1 EIF3H POSTAR2 ENCODE chr12:104458314-104458426
64251 chr12 16115830 16115830 1 + G T BRCA 16115828 + 16115808 16115848 41 GGCTGTGGAAGATGGAGCTACAGAAATCGACGTGGTAATTA GGCTGTGGAAGATGGAGCTACATAAATCGACGTGGTAATTA < 41bp 0.824774993496476 0.535247623735009 0.2234663 0.15928361 prediction 0.579054739522934 Functional Loss - DERA ENSG00000023697 CDS Human protein_coding chr12:16115828 chr12:16115830 stopgain 0.948 1 23 hm5C_associated_SNPs_56277 0 0 4 GRWD1 POSTAR2 ENCODE chr12:16115789-16115883
64251 chr11 68703982 68703982 1 + G T UCEC 68703980 + 68703960 68704000 41 CGTCCACCAGGACCGGAAGCCAGCGGCAGGAGGGAGGCCAG CGTCCACCAGGACCGGAAGCCATCGGCAGGAGGGAGGCCAG < 41bp 0.862590906113994 0.573071558895498 0.907252 0.5721605 prediction 0.579038694436993 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68703980 chr11:68703982 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_56279 0 0 1 PPIG POSTAR2 ENCODE chr11:68703957-68704004
64251 chr2 235950420 235950420 1 + G T STAD 235950418 + 235950398 235950438 41 GCTGTCCAGCTTCCTGACACCAGCATCAGCATCCACGTGCC GCTGTCCAGCTTCCTGACACCATCATCAGCATCCACGTGCC < 41bp 0.846223197289249 0.556710486774021 0.6910665 0.074968785 prediction 0.579025421030456 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950418 chr2:235950420 nonsynonymous SNV 0.866 1 23 hm5C_associated_SNPs_56280 0 0 1 RPS3 POSTAR2 ENCODE chr2:235950393-235950456
64251 chr9 88631517 88631517 1 + A T CHOL 88631513 + 88631493 88631533 41 ATTGAGTCGTGCCGATGGCTCTCAAATGGCAGAGGAAAGGA ATTGAGTCGTGCCGATGGCTCTCATATGGCAGAGGAAAGGA < 41bp 0.789512282269359 0.449579538266513 0.3888911 0.04165426 prediction 0.579024564538718 Functional Loss - NAA35 ENSG00000135040 CDS Human protein_coding chr9:88631513 chr9:88631517 nonsynonymous SNV 0.991 2 25 hm5C_associated_SNPs_56281 0 0 1 UCHL5 POSTAR2 ENCODE chr9:88631469-88631529
64251 chr8 87568409 87568409 1 + C T BLCA 87568407 + 87568387 87568427 41 AGACAAGCTATAGTTAATGCCTCCAGGCTGCCTATGTCCAT AGACAAGCTATAGTTAATGCCTTCAGGCTGCCTATGTCCAT < 41bp 0.789494644139957 0.497990651004343 0.952131 0.049488872 prediction 0.578989288279915 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87568407 chr8:87568409 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_56286 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:87568400-87568436
64251 chr3 5212250 5212250 1 + A T BLCA 5212246 + 5212226 5212266 41 CTTCAACATGAGGAAGGTAACTAAAGGTAACGTCACAATAA CTTCAACATGAGGAAGGTAACTAATGGTAACGTCACAATAA < 41bp 0.826129177839944 0.53665320875191 0.7500273 0.14075989 prediction 0.578951938176068 Functional Loss - ARL8B ENSG00000134108 CDS Human protein_coding chr3:5212246 chr3:5212250 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_56288 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:5212219-5212255
64251 chr19 18684488 18684488 1 + G T SARC 18684486 + 18684466 18684506 41 CCTCAGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCC CCTCAGGTATCCCACCTGACCATCAGCGTCTGATATTTGCC < 41bp 0.844607550494655 0.555167542776216 0.15894029 0.11374304 prediction 0.578880015436879 Functional Loss - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18684486 chr19:18684488 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56291 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:18684472-18684510
64251 chr22 50927578 50927578 1 + G T UCEC 50927576 + 50927556 50927596 41 GACCTCCAGGATCCTCGATACAGGTGCTCCCTGCTGCTGAG GACCTCCAGGATCCTCGATACATGTGCTCCCTGCTGCTGAG < 41bp 0.789403372901607 0.444032319830455 0.27930748 0.025135845 prediction 0.578806745803214 Functional Loss - MIOX ENSG00000100253 CDS Human protein_coding chr22:50927576 chr22:50927578 nonsynonymous SNV 0.968 3 23 hm5C_associated_SNPs_56295 0 0 1 PRPF8 POSTAR2 ENCODE chr22:50927566-50927628
64251 chr5 72874615 72874615 1 + G T UCEC 72874612 + 72874592 72874632 41 ACAGGCCAGCAAAGAAGCACCTAGAATTGTATGACAGGGAT ACAGGCCAGCAAAGAAGCACCTATAATTGTATGACAGGGAT < 41bp 0.789388477082699 0.431592011315377 0.2661019 0.29015028 prediction 0.578776954165398 Functional Loss - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72874612 chr5:72874615 stopgain 0.533 0 24 hm5C_associated_SNPs_56296 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:72874585-72874617
64251 chr19 1218445 1218445 1 + A T HNSC 1218441 + 1218421 1218461 41 TTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAG TTCAACTACTGAGGAGGTTACGGCTCAAAAATGTCATCCAG < 41bp 0.789374934814426 0.481485541465661 0.3423972 0.13699248 prediction 0.578749869628852 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1218441 chr19:1218445 nonsynonymous SNV 0.084 4 25 hm5C_associated_SNPs_56301 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1218417-1218447
64251 chr19 48917278 48917278 1 + G T UCEC 48917276 + 48917256 48917296 41 TGAACATCACGTGGGATAACCGGGATTACTCCTTCAATGAG TGAACATCACGTGGGATAACCGTGATTACTCCTTCAATGAG < 41bp 0.789374553249133 0.465522120734125 0.929852 0.4094539 prediction 0.578749106498267 Functional Loss - GRIN2D ENSG00000105464 CDS Human protein_coding chr19:48917276 chr19:48917278 synonymous SNV . 0 23 hm5C_associated_SNPs_56302 0 0 1 BUD13 POSTAR2 ENCODE chr19:48917203-48917335
64251 chr18 39542501 39542501 1 + G T UCEC 39542499 + 39542479 39542519 41 GTAAAATACCCTGACCTGCCCAGGAATGCCCAAGTGGCCCT GTAAAATACCCTGACCTGCCCATGAATGCCCAAGTGGCCCT < 41bp 0.834350943489713 0.545056118935425 0.73576474 0.053035647 prediction 0.578589649108575 Functional Loss - PIK3C3 ENSG00000078142 CDS Human protein_coding chr18:39542499 chr18:39542501 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_56308 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr18:39542482-39542524
64251 chr3 38048186 38048186 1 + A C STAD 38048182 + 38048162 38048202 41 CCAGAGGGCGTGGACCCTGCCCGCAGGGAGGTGGGCACCCC CCAGAGGGCGTGGACCCTGCCCGCCGGGAGGTGGGCACCCC < 41bp 0.78929007949227 0.385477311816274 0.15346107 0.10552156 prediction 0.57858015898454 Functional Loss - VILL ENSG00000136059 CDS Human protein_coding chr3:38048182 chr3:38048186 synonymous SNV . 0 25 hm5C_associated_SNPs_56309 0 0 1 PPIG POSTAR2 ENCODE chr3:38048116-38048198
64251 chr8 133827001 133827001 1 + G T GBM 133826998 + 133826978 133827018 41 TCTTCAGGGAAGGCTCGCAGCAAGAAATGCAAACATGAATC TCTTCAGGGAAGGCTCGCAGCAATAAATGCAAACATGAATC < 41bp 0.789287484963531 0.429524062569587 0.2288987 0.24191368 prediction 0.578574969927063 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133826998 chr8:133827001 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56310 0 0 4 GRWD1 POSTAR2 ENCODE chr8:133826928-133827046
64251 chr11 64799920 64799920 1 + G T OV 64799918 + 64799898 64799938 41 CATAGGTGGTGGTCTGGAAGCGGTACAGCGACTTCCGCAAG CATAGGTGGTGGTCTGGAAGCGTTACAGCGACTTCCGCAAG < 41bp 0.854157391519591 0.564885889063847 0.2143664 0.15173161 prediction 0.578543004911488 Functional Loss - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64799918 chr11:64799920 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_56311 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:64799899-64799925
64251 chr6 170159111 170159111 1 + G T SARC 170159109 + 170159089 170159129 41 GCTCTCCGTGTGGTCTCAACCTGCGTAACGTCTTATGGCAT GCTCTCCGTGTGGTCTCAACCTTCGTAACGTCTTATGGCAT < 41bp 0.789269815410609 0.476924876943525 0.32771033 0.1057238 prediction 0.578539630821217 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170159109 chr6:170159111 synonymous SNV . 0 23 hm5C_associated_SNPs_56312 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:170159081-170159118
64251 chr4 129778551 129778551 1 + G T UCEC 129778549 + 129778529 129778569 41 ACCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTAGT ACCAAGGTGTCACACATTCCCATCAGCCGGTGGGCGCTAGT < 41bp 0.847223061187501 0.557957141317692 0.16303566 0.0335446 prediction 0.578531839739617 Functional Loss - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129778549 chr4:129778551 nonsynonymous SNV 0.981 4 23 hm5C_associated_SNPs_56315 0 0 2 FXR2 POSTAR2 ENCODE chr4:129778509-129778562
64251 chr3 113514020 113514020 1 + G T LUSC 113514018 + 113513998 113514038 41 GGTGAAATGTCTTGGAAATCCTGAAAGAGAAGGGAGTGTCA GGTGAAATGTCTTGGAAATCCTTAAAGAGAAGGGAGTGTCA < 41bp 0.824222460825748 0.534963042878348 0.13812363 0.16413695 prediction 0.5785188358948 Functional Loss - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113514018 chr3:113514020 stopgain 1.000 1 23 hm5C_associated_SNPs_56316 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:113513980-113514020
64251 chr1 41223931 41223931 1 + G T OV 41223929 + 41223909 41223949 41 CTCCACGACCACCATCCAGCCTGGGCAGATCATCATCGCAC CTCCACGACCACCATCCAGCCTTGGCAGATCATCATCGCAC < 41bp 0.841700307444341 0.552452740657702 0.13919285 0.03016749 prediction 0.578495133573278 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41223929 chr1:41223931 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_56317 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:41223915-41223943
64251 chr8 117783821 117783821 1 + G T GBM 117783819 + 117783799 117783839 41 CTTTGTAAAAGCAGTGGAGTCAGGTCAGCTTGTCTCAGTGC CTTTGTAAAAGCAGTGGAGTCATGTCAGCTTGTCTCAGTGC < 41bp 0.791227911107173 0.501981960900173 0.343472 0.12805268 prediction 0.578491900414 Functional Loss - UTP23 ENSG00000147679 CDS Human protein_coding chr8:117783819 chr8:117783821 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_56318 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:117783812-117783830
64251 chr9 91616620 91616620 1 + G T LIHC 91616617 + 91616597 91616637 41 GCTGGCTCATTGCCTTCACGCTGGGCGCCCTGCCCATTCTG GCTGGCTCATTGCCTTCACGCTGTGCGCCCTGCCCATTCTG < 41bp 0.898193352687069 0.608962757296204 0.9201154 0.3878335 prediction 0.57846119078173 Functional Loss - S1PR3 ENSG00000213694 CDS Human protein_coding chr9:91616617 chr9:91616620 nonsynonymous SNV 0.961 4 24 hm5C_associated_SNPs_56320 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:91616616-91616642
64251 chr2 135199405 135199405 1 + G T STAD 135199403 + 135199383 135199423 41 CTTGCTGAGCCCGGGCAGTCCTGCAAGCAGGTGTGCCAGGA CTTGCTGAGCCCGGGCAGTCCTTCAAGCAGGTGTGCCAGGA < 41bp 0.78921848587541 0.476178747950333 0.723219 0.55695814 prediction 0.57843697175082 Functional Loss - MGAT5 ENSG00000152127 CDS Human protein_coding chr2:135199403 chr2:135199405 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56323 0 0 3 BUD13 POSTAR2 ENCODE chr2:135199272-135199421
64251 chr2 101591311 101591311 1 + A T LUAD 101591307 + 101591287 101591327 41 CTCGGCAGCACTTTAACACACTCGACGTGGGTGCCTCGGGC CTCGGCAGCACTTTAACACACTCGTCGTGGGTGCCTCGGGC < 41bp 0.851967942844718 0.562764430947379 0.52710485 0.23765558 prediction 0.578407023794679 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101591307 chr2:101591311 nonsynonymous SNV 0.287 1 25 hm5C_associated_SNPs_56324 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101591274-101591328
64251 chrX 55744813 55744813 1 + G T UCEC 55744810 + 55744790 55744830 41 GGAGAAAGAAAATCTGGGGCCGAGAATGGATCCACCACTAG GGAGAAAGAAAATCTGGGGCCGATAATGGATCCACCACTAG < 41bp 0.88227786142064 0.593081233620429 0.30067736 0.14657459 prediction 0.578393255600422 Functional Loss - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55744810 chrX:55744813 nonsynonymous SNV 0.963 3 24 hm5C_associated_SNPs_56326 0 0 3 GRWD1 POSTAR2 ENCODE chrX:55744799-55744853
64251 chr3 122869173 122869173 1 + A C UCEC 122869169 + 122869149 122869189 41 GGGACAACTTCCGGGAGACCCTGAAGAAGAAGAAACACACC GGGACAACTTCCGGGAGACCCTGACGAAGAAGAAACACACC < 41bp 0.789188554645201 0.370858225084325 0.15389249 0.057519525 prediction 0.578377109290402 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122869169 chr3:122869173 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_56329 0 0 6 DDX24 POSTAR2 ENCODE chr3:122869140-122869212
64251 chr7 99964979 99964979 1 + G T LUSC 99964976 + 99964956 99964996 41 ACTTCCCCTCCTGCAGGTAGCAGGGCGCCAAGCAGTGACTT ACTTCCCCTCCTGCAGGTAGCAGTGCGCCAAGCAGTGACTT < 41bp 0.789171310299335 0.413286236649261 0.92695934 0.1581726 prediction 0.578342620598669 Functional Loss - PILRB ENSG00000121716 CDS Human protein_coding chr7:99964976 chr7:99964979 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_56331 0 0 3 BUD13 POSTAR2 ENCODE chr7:99964954-99964994
64251 chr12 121138350 121138350 1 + G T rs560736 121138347 + 121138327 121138367 41 GGCAAGGCAAAGTGATAGTACACGGAAGCAGAACCGGAAAC GGCAAGGCAAAGTGATAGTACACTGAAGCAGAACCGGAAAC < 41bp 0.845372846698289 0.556201704831604 0.4766998 0.38022882 prediction 0.57834228373337 Functional Loss - MLEC ENSG00000110917 UTR3 Human protein_coding chr12:121138347 chr12:121138350 . . 0 24 hm5C_associated_SNPs_56332 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:121138339-121138360
64251 chr16 30964852 30964852 1 + G T LUAD 30964849 + 30964829 30964869 41 GACCCCCATGGTGCCCACATCCCGGGTGCCCGGGACTCTGG GACCCCCATGGTGCCCACATCCCTGGTGCCCGGGACTCTGG < 41bp 0.789160013120405 0.397000934926272 0.7327562 0.11890167 prediction 0.57832002624081 Functional Loss - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964849 chr16:30964852 nonsynonymous SNV 0.402 1 24 hm5C_associated_SNPs_56334 0 0 3 RBM15 POSTAR2 ENCODE chr16:30964799-30964852
64251 chr17 12016610 12016610 1 + G T OV 12016608 + 12016588 12016628 41 AATATTAAGCTCTGTGACTTCGGCATCAGTGGACAGCTTGT AATATTAAGCTCTGTGACTTCGTCATCAGTGGACAGCTTGT < 41bp 0.789150671518016 0.477946084556529 0.83092076 0.19433868 prediction 0.578301343036032 Functional Loss - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12016608 chr17:12016610 nonsynonymous SNV 0.980 5 23 hm5C_associated_SNPs_56335 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:12016563-12016634
64251 chr2 220072422 220072422 1 + G T CESC 220072420 + 220072400 220072440 41 AATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTGACCG AATGTGCCTGTGCCTGTGGCCATAGGGGAGCCCCCTGACCG < 41bp 0.843697132523993 0.554564299858075 0.9222501 0.9041042 prediction 0.578265665331836 Functional Loss - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072420 chr2:220072422 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56337 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:220072411-220072436
64251 chr10 28971096 28971096 1 + G T CESC 28971094 + 28971074 28971114 41 TTCGAAGTGAAAATAAGAGGCTGCAGGATCAGCGGCAACAG TTCGAAGTGAAAATAAGAGGCTTCAGGATCAGCGGCAACAG < 41bp 0.816298422588162 0.527167296003857 0.12905866 0.09519842 prediction 0.578262253168609 Functional Loss - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971094 chr10:28971096 synonymous SNV . 0 23 hm5C_associated_SNPs_56339 0 0 1 RBM15 POSTAR2 ENCODE chr10:28971047-28971145
64251 chr20 18454060 18454060 1 + G T UCEC 18454057 + 18454037 18454077 41 AAATGAAGGGATCCGATAACCAAGAAAAACTAGTATATCAA AAATGAAGGGATCCGATAACCAATAAAAACTAGTATATCAA < 41bp 0.789115743612274 0.435787160823916 0.8845084 0.35944182 prediction 0.578231487224548 Functional Loss - POLR3F ENSG00000132664 CDS Human protein_coding chr20:18454057 chr20:18454060 stopgain 1.000 1 24 hm5C_associated_SNPs_56342 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:18454036-18454072
64251 chr19 13059026 13059026 1 + G C SKCM 13059022 + 13059002 13059042 41 CCAGGGTACCTCAGCACCCCCAGAGGCCTCACCCACAGCTG CCAGGGTACCTCAGCACCCCCAGACGCCTCACCCACAGCTG < 41bp 0.79669165457654 0.50757970511633 0.9219737 0.85704654 prediction 0.578223898920418 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059022 chr19:13059026 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_56343 0 0 2 METAP2 POSTAR2 ENCODE chr19:13058989-13059029
64251 chr4 41984889 41984889 1 + G T UCEC 41984886 + 41984866 41984906 41 CCTTCCCCGTACTCTGCCTCCGAGGACGACATTCCCAGCGT CCTTCCCCGTACTCTGCCTCCGATGACGACATTCCCAGCGT < 41bp 0.887450719080164 0.598374186044256 0.9122666 0.29033518 prediction 0.578153066071817 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984886 chr4:41984889 nonsynonymous SNV 0.381 1 24 hm5C_associated_SNPs_56345 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:41984834-41984904
64251 chr17 48562123 48562123 1 + G T COAD 48562120 + 48562100 48562140 41 TCCAGGGGTCTTCGGTGTTCCTGGGAGGGTCTGGCTGTGCT TCCAGGGGTCTTCGGTGTTCCTGTGAGGGTCTGGCTGTGCT < 41bp 0.789051309331258 0.419336023322809 0.910357 0.28471422 prediction 0.578102618662516 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48562120 chr17:48562123 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_56349 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:48562120-48562147
64251 chr10 102738084 102738084 1 - C A rs74154244 102738087 - 102738067 102738107 41 GGACACTTCTCCTTCCCCTCCTCGAAGCTGGTTGGCAAGGT GGACACTTCTCCTTCCCCTCCTCTAAGCTGGTTGGCAAGGT < 41bp 0.859816987761735 0.570785144515911 0.85992163 0.8848773 prediction 0.578063686491647 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738087 chr10:102738084 nonsynonymous SNV 0.388 1 24 hm5C_associated_SNPs_56350 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:102738080-102738111
64251 chr2 32891805 32891805 1 + A T LIHC 32891801 + 32891781 32891821 41 CCTTTCAAATTGTGAATTCACTCCAGCACCCACTCCTCAGG CCTTTCAAATTGTGAATTCACTCCTGCACCCACTCCTCAGG < 41bp 0.86169228805738 0.57266200889432 0.91633916 0.04554695 prediction 0.578060558326121 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32891801 chr2:32891805 synonymous SNV . 0 25 hm5C_associated_SNPs_56351 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:32891788-32891809
64251 chr17 12893459 12893459 1 + G T ACC 12893457 + 12893437 12893477 41 AGTAACTGACAAGAGGGACTCGGAGGAGGAGTCTGAGAGCA AGTAACTGACAAGAGGGACTCGTAGGAGGAGTCTGAGAGCA < 41bp 0.842584175478579 0.553563026741086 0.85563195 0.54875624 prediction 0.578042297474986 Functional Loss - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12893457 chr17:12893459 stopgain 1.000 1 23 hm5C_associated_SNPs_56352 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:12893447-12893468
64251 chr7 99017071 99017071 1 - C G rs14935 99017072 - 99017052 99017092 41 CCAGAGTCCAGGGTGGAGCGCGCCAGCCTCAGCCAGAGCAG CCAGAGTCCAGGGTGGAGCGCCCCAGCCTCAGCCAGAGCAG < 41bp 0.8067591140599 0.517758769750039 0.26460868 0.05671698 prediction 0.578000688619722 Functional Loss - ATP5J2-PTCD1;BUD31;PTCD1 ENSG00000106245;ENSG00000106246 UTR3 Human other chr7:99017072 chr7:99017071 . . 0 22 hm5C_associated_SNPs_56355 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:99017070-99017093
64251 chr3 133525472 133525472 1 + G T LUAD 133525469 + 133525449 133525489 41 ACAGTCTTCTGGAAGTTAATCCGGAGCAGAAGGAGCAGTCA ACAGTCTTCTGGAAGTTAATCCGTAGCAGAAGGAGCAGTCA < 41bp 0.788986932147987 0.408415528515201 0.87478405 0.36466748 prediction 0.577973864295974 Functional Loss - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133525469 chr3:133525472 synonymous SNV . 0 24 hm5C_associated_SNPs_56356 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:133525452-133525477
64251 chr9 133327679 133327679 1 + G T LIHC 133327676 + 133327656 133327696 41 GCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACAA GCCTGGACACCTCGTGCATCCTCTTGTGGCTGAAGGAACAA < 41bp 0.788954670313837 0.412398491982059 0.11382088 0.058364958 prediction 0.577909340627674 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133327676 chr9:133327679 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_56360 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:133327640-133327680
64251 chr20 62904848 62904848 1 + G T LUAD 62904846 + 62904826 62904866 41 AAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCC AAGAAGAAGAGAAGACCCCGCCTGAAACAAAGCCAGACCCC < 41bp 0.823830186290984 0.534877462367883 0.54704934 0.123854965 prediction 0.577905447846202 Functional Loss - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904846 chr20:62904848 synonymous SNV . 0 23 hm5C_associated_SNPs_56362 0 0 7 GRWD1 POSTAR2 ENCODE chr20:62904807-62904874
64251 chr7 100210422 100210422 1 + G C CESC 100210421 + 100210401 100210441 41 CGCCCAGAGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAG CGCCCAGAGCCTGCATGCGCCCTGGGGCGCCCCAGGACCAG < 41bp 0.800043846959637 0.511093101618232 0.26566547 0.122947484 prediction 0.577901490682811 Functional Loss - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210421 chr7:100210422 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_56363 0 0 2 DDX3X POSTAR2 ENCODE chr7:100210330-100210446
64251 chr19 3381731 3381731 1 + G C LUAD 3381730 + 3381710 3381750 41 GATGAGTTCCACCCGTTCATCGAGGCCCTGCTGCCTCACGT GATGAGTTCCACCCGTTCATCCAGGCCCTGCTGCCTCACGT < 41bp 0.813894792372689 0.52496279405465 0.9242172 0.707187 prediction 0.577863996636078 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381730 chr19:3381731 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_56366 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:3381720-3381740
64251 chr11 107832962 107832962 1 + G T GBM 107832959 + 107832939 107832979 41 AGAATCCTTCACAATCTTGACGAGAGACATATATGAACTTA AGAATCCTTCACAATCTTGACGATAGACATATATGAACTTA < 41bp 0.788912537801247 0.438312922810094 0.18807343 0.017819375 prediction 0.577825075602495 Functional Loss - RAB39A ENSG00000179331 CDS Human protein_coding chr11:107832959 chr11:107832962 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_56370 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:107832939-107832964
64251 chr6 36193116 36193116 1 + G C HNSC 36193115 + 36193095 36193135 41 AGCTGGTGTGGGCCAAGTGCCGAGGCTACCCCTCCTACCCT AGCTGGTGTGGGCCAAGTGCCCAGGCTACCCCTCCTACCCT < 41bp 0.788904831391662 0.489547292203346 0.9341296 0.92280006 prediction 0.577809662783324 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36193115 chr6:36193116 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_56374 0 0 1 DDX24 POSTAR2 ENCODE chr6:36193087-36193137
64251 chr6 33173447 33173447 1 + G T OV 33173445 + 33173425 33173465 41 CGTGGGGCAGACAAACTATGCAGCATCCAAGGCTGGAGTGA CGTGGGGCAGACAAACTATGCATCATCCAAGGCTGGAGTGA < 41bp 0.788888493786698 0.472556387415266 0.87666994 0.32225376 prediction 0.577776987573397 Functional Loss - HSD17B8 ENSG00000204228 CDS Human protein_coding chr6:33173445 chr6:33173447 nonsynonymous SNV 0.719 1 23 hm5C_associated_SNPs_56375 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33173442-33173472
64251 chr11 93487189 93487189 1 + G T THCA 93487186 + 93487166 93487206 41 GAGCAGGTCCATTTCAGACTCTCGGGTTCAATTCTGAGGTC GAGCAGGTCCATTTCAGACTCTCTGGTTCAATTCTGAGGTC < 41bp 0.880479750508212 0.591642766450851 0.481024 0.36591554 prediction 0.577673968114723 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93487186 chr11:93487189 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_56382 0 0 1 PPIG POSTAR2 ENCODE chr11:93487150-93487204
64251 chr14 39650122 39650122 1 + G T STAD 39650120 + 39650100 39650140 41 TCAAACATGTAATTGCTGACCAGGAGGTAATGGAAACTAAT TCAAACATGTAATTGCTGACCATGAGGTAATGGAAACTAAT < 41bp 0.807859797937979 0.519062021477674 0.9102214 0.32345468 prediction 0.57759555292061 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39650120 chr14:39650122 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_56391 0 0 42 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:39649996-39650217
64251 chr1 93812309 93812309 1 + G T ESCA 93812306 + 93812286 93812326 41 TGTCCGGGTGGCCAACGATGCTCGAGAGCTGGTGGTGAACT TGTCCGGGTGGCCAACGATGCTCTAGAGCTGGTGGTGAACT < 41bp 0.865023011049246 0.576253448775646 0.15823409 0.7987021 prediction 0.577539124547199 Functional Loss - DR1 ENSG00000117505 CDS Human protein_coding chr1:93812306 chr1:93812309 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_56393 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:93812258-93812415
64251 chr1 161501979 161501979 1 + A C rs35852976 161501975 + 161501955 161501995 41 GGGAGAGCGGGGTTCGCTCTCCCGACGGGGAGATTACAGTT GGGAGAGCGGGGTTCGCTCTCCCGCCGGGGAGATTACAGTT < 41bp 0.788769405376021 0.454474389725191 0.2916793 0.30503684 prediction 0.577538810752043 Functional Loss - HSPA6;FCGR3A ENSG00000273112 ncRNA_intronic Human processed_transcript chr1:161501975 chr1:161501979 . . 0 25 hm5C_associated_SNPs_56394 0 0 6 SSB POSTAR2 GSE95683,GSM2521599 chr1:161501960-161501980
64251 chr3 184060596 184060596 1 + G T UCEC 184060593 + 184060573 184060613 41 GCATGGTCTTCGGTGGATGGCGAGGACTCCACTGATGACTC GCATGGTCTTCGGTGGATGGCGATGACTCCACTGATGACTC < 41bp 0.788734254588008 0.399624031367784 0.8479887 0.26449084 prediction 0.577468509176017 Functional Loss - FAM131A ENSG00000175182 CDS Human protein_coding chr3:184060593 chr3:184060596 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_56396 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:184060588-184060609
64251 chr2 187367272 187367272 1 + G T UCEC 187367269 + 187367249 187367289 41 AAGCTGGAAGAAGTAGTGAACAAGAAGCACGGTGAGGCGGA AAGCTGGAAGAAGTAGTGAACAATAAGCACGGTGAGGCGGA < 41bp 0.799833357330993 0.511136916241263 0.3577608 0.1442481 prediction 0.57739288217946 Functional Loss - ZC3H15 ENSG00000065548;ENSG00000268846 CDS Human other chr2:187367269 chr2:187367272 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_56398 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:187367221-187367287
64251 chr12 110353227 110353227 1 + A C BLCA 110353223 + 110353203 110353243 41 CTCAGGTTGCAGAGCGCCGGCTGCAGGCATGGGAAGCAGAC CTCAGGTTGCAGAGCGCCGGCTGCCGGCATGGGAAGCAGAC < 41bp 0.788692827180477 0.3739127521997 0.35644928 0.20335662 prediction 0.577385654360953 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110353223 chr12:110353227 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_56401 0 0 3 BUD13 POSTAR2 ENCODE chr12:110353208-110353327
64251 chr5 128448564 128448564 1 + G T UCEC 128448561 + 128448541 128448581 41 GTTCAAGCGTCTCGCTCGAACCGGGATCATAGTGACCACGA GTTCAAGCGTCTCGCTCGAACCGTGATCATAGTGACCACGA < 41bp 0.788692169726619 0.41513102975995 0.51332587 0.043763608 prediction 0.577384339453238 Functional Loss - ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128448561 chr5:128448564 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_56402 0 0 1 GEMIN5 POSTAR2 ENCODE chr5:128448539-128448576
64251 chr19 17452350 17452350 1 + G T LUAD 17452348 + 17452328 17452368 41 CAAGGCACCAGCACCACCTCCAGGGTTGCCTGGATGCCCTC CAAGGCACCAGCACCACCTCCATGGTTGCCTGGATGCCCTC < 41bp 0.788688444037726 0.457351932073111 0.9239282 0.36055467 prediction 0.577376888075452 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452348 chr19:17452350 nonsynonymous SNV 0.685 0 23 hm5C_associated_SNPs_56403 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:17452347-17452373
64251 chr21 30411834 30411834 1 + A T UCEC 30411830 + 30411810 30411850 41 GGTTTAAAGGCTATCAGCAGCAAGACAGCCAGGAGCTGCTT GGTTTAAAGGCTATCAGCAGCAAGTCAGCCAGGAGCTGCTT < 41bp 0.816983884916047 0.528364872660514 0.28003967 0.14712453 prediction 0.577238024511067 Functional Loss - USP16 ENSG00000156256 CDS Human protein_coding chr21:30411830 chr21:30411834 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_56413 0 0 2 BUD13 POSTAR2 ENCODE chr21:30411792-30411862
64251 chr20 55027854 55027854 1 + A T UCEC 55027850 + 55027830 55027870 41 CAAAGGAAAGCTTGGATAATCGCAATTGGCCTCTGGAAGTT CAAAGGAAAGCTTGGATAATCGCATTTGGCCTCTGGAAGTT < 41bp 0.801627675832489 0.513092270262584 0.36912936 0.43980744 prediction 0.577070811139811 Functional Loss - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55027850 chr20:55027854 nonsynonymous SNV 0.835 1 25 hm5C_associated_SNPs_56425 0 0 1 UCHL5 POSTAR2 ENCODE chr20:55027815-55027929
64251 chr1 46073649 46073649 1 + G T LIHC 46073647 + 46073627 46073667 41 AACAGAGGCTGCAGAGGCCTCAGCTGTAGAGGCTGGATCAG AACAGAGGCTGCAGAGGCCTCATCTGTAGAGGCTGGATCAG < 41bp 0.788535380760221 0.467017219652581 0.50408393 0.10635972 prediction 0.577070761520443 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073647 chr1:46073649 nonsynonymous SNV 0.078 2 23 hm5C_associated_SNPs_56426 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:46073649-46073785
64251 chr12 57485373 57485373 1 + G T KICH 57485370 + 57485350 57485390 41 GGACCTGGGGCAGGGGACCCCCGGATCTGGCCAGGCCGGAG GGACCTGGGGCAGGGGACCCCCGTATCTGGCCAGGCCGGAG < 41bp 0.899379718578308 0.610855338449391 0.87433314 0.40758187 prediction 0.577048760257834 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485370 chr12:57485373 synonymous SNV . 0 24 hm5C_associated_SNPs_56428 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:57485331-57485377
64251 chr18 9931897 9931897 1 + G C BRCA 9931896 + 9931876 9931916 41 AAGTGAAGACTACAGCACCTCGCCGGTACTGTGTGAGGCCC AAGTGAAGACTACAGCACCTCCCCGGTACTGTGTGAGGCCC < 41bp 0.788509225743093 0.497079929288422 0.051138848 0.02706191 prediction 0.577018451486185 Functional Loss - VAPA ENSG00000101558 CDS Human protein_coding chr18:9931896 chr18:9931897 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_56430 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:9931866-9931910
64251 chr1 15986589 15986589 1 + G T LUSC 15986586 + 15986566 15986606 41 AGAAAGAACATCTTTCTTTACAAGATCTTTCTGATCATGCT AGAAAGAACATCTTTCTTTACAATATCTTTCTGATCATGCT < 41bp 0.872737411077582 0.584268786432186 0.16674367 0.043164313 prediction 0.576937249290791 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15986586 chr1:15986589 nonsynonymous SNV 0.651 1 24 hm5C_associated_SNPs_56436 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:15986573-15986621
64251 chr8 27297833 27297833 1 + G T THYM 27297831 + 27297811 27297851 41 ACAAGGATGTCATCGGGGTGCTGGAGAAAGGAGACCGGCTG ACAAGGATGTCATCGGGGTGCTTGAGAAAGGAGACCGGCTG < 41bp 0.843534373920682 0.555078402462391 0.89996254 0.4659164 prediction 0.576911942916581 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27297831 chr8:27297833 synonymous SNV . 0 23 hm5C_associated_SNPs_56439 0 0 1 DDX24 POSTAR2 ENCODE chr8:27297822-27297846
64251 chrX 1531700 1531700 1 + A T rs113135794 1531696 + 1531676 1531716 41 CTGGCCAGTCATGCAGGATCCGGCACAGGACGTACAGCTCA CTGGCCAGTCATGCAGGATCCGGCTCAGGACGTACAGCTCA < 41bp 0.824310655571436 0.535876358479775 0.19574371 0.250562 prediction 0.576868594183321 Functional Loss - ASMTL ENSG00000169093 CDS Human protein_coding chrX:1531696 chrX:1531700 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_56445 0 0 2 GRWD1 POSTAR2 ENCODE chrX:1531692-1531705
64251 chr3 50036894 50036894 1 + G T SARC 50036892 + 50036872 50036912 41 GGTTACGACTATGGCTATGTCTGCGTGGAGTTTTCACTCTT GGTTACGACTATGGCTATGTCTTCGTGGAGTTTTCACTCTT < 41bp 0.788432807748389 0.483505655373622 0.10605237 0.11191264 prediction 0.576865615496777 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50036892 chr3:50036894 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_56446 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:50036881-50036895
64251 chr11 134135056 134135056 1 + A C rs79738869 134135052 + 134135032 134135072 41 CCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCA CCCCAGTGGAACCGGAAGAGCTGGCCTGATGAGAAACATCA < 41bp 0.878582130401447 0.590149564031562 0.20255557 0.19317877 prediction 0.57686513273977 Functional Loss - ACAD8 ENSG00000151498 UTR3 Human protein_coding chr11:134135052 chr11:134135056 . . 0 25 hm5C_associated_SNPs_56447 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:134134971-134135068
64251 chr8 86180714 86180714 1 + G T UCEC 86180711 + 86180691 86180731 41 GATCCTCCAGGGTAAACAAACTCGATTCACAAATTTTGACC GATCCTCCAGGGTAAACAAACTCTATTCACAAATTTTGACC < 41bp 0.788424928615519 0.432177232053119 0.318905 0.7252772 prediction 0.576849857231039 Functional Loss - CA13 ENSG00000185015 CDS Human protein_coding chr8:86180711 chr8:86180714 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_56449 0 0 1 PPIG POSTAR2 ENCODE chr8:86180700-86180803
64251 chr17 73512653 73512653 1 + G T rs7216673 73512650 + 73512630 73512670 41 GGCGGCGGCGGGATGGAGCCCGAGCCCGAGCCCGCGGCCGT GGCGGCGGCGGGATGGAGCCCGATCCCGAGCCCGCGGCCGT < 41bp 0.877787080781383 0.589372045983326 0.59328544 0.3888729 prediction 0.576830069596113 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73512650 chr17:73512653 nonsynonymous SNV 0.132 0 24 hm5C_associated_SNPs_56451 2 0 1 DDX3X POSTAR2 ENCODE chr17:73512629-73512700
64251 chrX 44929065 44929065 1 + G T CESC 44929062 + 44929042 44929082 41 AACCAAAGAGAGCAAGCCTTCAGGAAACATATTGACGGTGC AACCAAAGAGAGCAAGCCTTCAGTAAACATATTGACGGTGC < 41bp 0.857533366298126 0.569137618978471 0.8448838 0.07910776 prediction 0.57679149463931 Functional Loss - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44929062 chrX:44929065 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56453 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:44929035-44929070
64251 chr22 41572389 41572389 1 + G T SKCM 41572386 + 41572366 41572406 41 CGCTGGCAAGGGACAAGCACCTGGAGTTCTCTTCACTCCGA CGCTGGCAAGGGACAAGCACCTGTAGTTCTCTTCACTCCGA < 41bp 0.788394637496791 0.420225211601035 0.8732226 0.28540912 prediction 0.576789274993582 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41572386 chr22:41572389 stopgain 1.000 1 24 hm5C_associated_SNPs_56455 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41572325-41572399
64251 chr1 173806114 173806114 1 + G T LUSC 173806112 + 173806092 173806132 41 TTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCTCTCC TTTAGTACCATCCAGGGAACCTTGAAAGTTTTATTCTCTCC < 41bp 0.835072707680985 0.546683158471473 0.29344064 0.094938755 prediction 0.576779098419024 Functional Loss - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173806112 chr1:173806114 stopgain 1.000 1 23 hm5C_associated_SNPs_56456 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:173806089-173806114
64251 chr6 80816381 80816381 1 + A C rs528856152 80816377 + 80816357 80816397 41 TCCCCGCAGGCGGCGTGCGGCTGCATAGCCTGAGAATCCCG TCCCCGCAGGCGGCGTGCGGCTGCCTAGCCTGAGAATCCCG < 41bp 0.788369600888887 0.471725880224019 0.7660675 0.3677763 prediction 0.576739201777775 Functional Loss - BCKDHB ENSG00000083123 UTR5 Human protein_coding chr6:80816377 chr6:80816381 . . 0 25 hm5C_associated_SNPs_56459 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:80816380-80816381
64251 chr22 50279075 50279075 1 + G T HNSC 50279072 + 50279052 50279092 41 ACTGTGGCCGGACCATCAGCCGGGGGAAGAAGCCGACTAAC ACTGTGGCCGGACCATCAGCCGGTGGAAGAAGCCGACTAAC < 41bp 0.891129607973494 0.602798203851426 0.9441693 0.88726914 prediction 0.576662808244136 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279072 chr22:50279075 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_56464 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr22:50279046-50279076
64251 chr9 130207365 130207365 1 + G T SARC 130207363 + 130207343 130207383 41 ACCAGAGCTCATCCCTTAGTCAGCATCAGAGAATCCACACA ACCAGAGCTCATCCCTTAGTCATCATCAGAGAATCCACACA < 41bp 0.788311249789315 0.478767173168573 0.18572354 0.0149850845 prediction 0.57662249957863 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207363 chr9:130207365 nonsynonymous SNV 0.991 0 23 hm5C_associated_SNPs_56467 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130207337-130207379
64251 chr16 21261931 21261931 1 + G T UCEC 21261929 + 21261909 21261949 41 ATGTGGTCGATGCCACGCCCCTGGAAGTGTTCTTGCTGTCT ATGTGGTCGATGCCACGCCCCTTGAAGTGTTCTTGCTGTCT < 41bp 0.788307565865179 0.463338561576279 0.3357476 0.08702797 prediction 0.576615131730358 Functional Loss - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261929 chr16:21261931 synonymous SNV . 0 23 hm5C_associated_SNPs_56468 0 0 3 PPIG POSTAR2 ENCODE chr16:21261919-21261991
64251 chr22 44514977 44514977 1 + G T SARC 44514975 + 44514955 44514995 41 AGAGGATCATTGTGAAGCAGCTGGAGGAAGACCTGTATGAC AGAGGATCATTGTGAAGCAGCTTGAGGAAGACCTGTATGAC < 41bp 0.846056733148094 0.557758104260383 0.63789177 0.39667773 prediction 0.576597257775422 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44514975 chr22:44514977 synonymous SNV . 0 23 hm5C_associated_SNPs_56471 0 0 1 BUD13 POSTAR2 ENCODE chr22:44514913-44515021
64251 chr6 43395875 43395875 1 + G C CESC 43395874 + 43395854 43395894 41 TGCCTGTTACTTGGGCACCCCGAGGTGGGTAGAGACGGGCG TGCCTGTTACTTGGGCACCCCCAGGTGGGTAGAGACGGGCG < 41bp 0.812934393670534 0.524675709002832 0.6944546 0.19541994 prediction 0.576517369335403 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43395874 chr6:43395875 synonymous SNV . 0 22 hm5C_associated_SNPs_56476 0 0 2 PRPF8 POSTAR2 ENCODE chr6:43395855-43395915
64251 chr12 57180957 57180957 1 + A T LUSC 57180953 + 57180933 57180973 41 TGTTGAATTGTAGCACAAACCTGAACCTGGTCACTGACTGC TGTTGAATTGTAGCACAAACCTGATCCTGGTCACTGACTGC < 41bp 0.810295247139727 0.522085548556853 0.20225424 0.10305631 prediction 0.576419397165748 Functional Loss - HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57180953 chr12:57180957 nonsynonymous SNV 0.875 1 25 hm5C_associated_SNPs_56484 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:57180946-57180981
64251 chrX 155169387 155169387 1 + G T BRCA 155169385 + 155169365 155169405 41 TCTGTCACCTTCAAAACTACCAGCAGAAATCTTGCTCGAGC TCTGTCACCTTCAAAACTACCATCAGAAATCTTGCTCGAGC < 41bp 0.788205121845808 0.482616250408607 0.19734922 0.12728974 prediction 0.576410243691617 Functional Loss - VAMP7 ENSG00000124333 CDS Human protein_coding chrX:155169385 chrX:155169387 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_56485 0 0 1 SF3B4 POSTAR2 ENCODE chrX:155169309-155169392
64251 chr1 228362898 228362898 1 + G T SARC 228362896 + 228362876 228362916 41 TCCAACCTGGCCTTCATGAACGGCGTGAGCTTCACCAAAGG TCCAACCTGGCCTTCATGAACGTCGTGAGCTTCACCAAAGG < 41bp 0.827121953162482 0.538926843716833 0.9063824 0.5664267 prediction 0.5763902188913 Functional Loss - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362896 chr1:228362898 nonsynonymous SNV 0.941 4 23 hm5C_associated_SNPs_56486 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:228362890-228362911
64251 chr2 163204108 163204108 1 + G T SARC 163204106 + 163204086 163204126 41 AGTTTGGAAATTTTAGCATTCAGGTGCCAGGAATGCAGATG AGTTTGGAAATTTTAGCATTCATGTGCCAGGAATGCAGATG < 41bp 0.83748688808275 0.549314279369879 0.5468247 0.19782996 prediction 0.57634521742574 Functional Loss - GCA ENSG00000115271 CDS Human protein_coding chr2:163204106 chr2:163204108 nonsynonymous SNV 0.846 0 23 hm5C_associated_SNPs_56490 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:163204102-163204134
64251 chr8 90798866 90798866 1 + G T LUSC 90798864 + 90798844 90798884 41 CCATGAAAATAGTGGTTCTCCTGAAACTTCAAGGTCCCTGC CCATGAAAATAGTGGTTCTCCTTAAACTTCAAGGTCCCTGC < 41bp 0.836512185316549 0.548359103550961 0.02148205 0.06808704 prediction 0.576306163531177 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90798864 chr8:90798866 stopgain 0.279 0 23 hm5C_associated_SNPs_56493 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:90798859-90798883
64251 chr19 45515301 45515301 1 + A C DLBC 45515297 + 45515277 45515317 41 GTGTCTCGCGGGGCTGCGTCCCTGAGCACGGTCACCCTGGG GTGTCTCGCGGGGCTGCGTCCCTGCGCACGGTCACCCTGGG < 41bp 0.788148892281068 0.425093535049281 0.2852038 0.23964524 prediction 0.576297784562135 Functional Loss - RELB ENSG00000104856 CDS Human protein_coding chr19:45515297 chr19:45515301 nonsynonymous SNV 0.145 1 25 hm5C_associated_SNPs_56495 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:45515300-45515301
64251 chr12 57957931 57957931 1 + G T LUSC 57957928 + 57957908 57957948 41 TCAGCTGATGGGAATCATTCCTCGAATTGCCCGAGACATCT TCAGCTGATGGGAATCATTCCTCTAATTGCCCGAGACATCT < 41bp 0.788120717160058 0.414626358285712 0.50482607 0.8425622 prediction 0.576241434320117 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57957928 chr12:57957931 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_56501 0 0 1 DDX24 POSTAR2 ENCODE chr12:57957930-57957980
64251 chr15 88122580 88122580 1 + G T rs182276628 88122578 + 88122558 88122598 41 CAGGGATTTTCTCATTAGCACAGGGTTCCAAGCCCAAACCG CAGGGATTTTCTCATTAGCACATGGTTCCAAGCCCAAACCG < 41bp 0.812683445426886 0.524576572015133 0.33874452 0.13986829 prediction 0.576213746823507 Functional Loss - LINC00052 ENSG00000259527 ncRNA_exonic Human lincRNA chr15:88122578 chr15:88122580 . . 0 23 hm5C_associated_SNPs_56502 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr15:88122559-88122580
64251 chr6 43488504 43488504 1 + A T UCEC 43488500 + 43488480 43488520 41 CACCTGGTGTTATTGAGGTGCAGGAAGTCCAAGGTATGGTA CACCTGGTGTTATTGAGGTGCAGGTAGTCCAAGGTATGGTA < 41bp 0.820066181209865 0.531976644348115 0.8784896 0.35140833 prediction 0.5761790737235 Functional Loss - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488500 chr6:43488504 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_56506 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:43488470-43488508
64251 chr8 23429055 23429055 1 + A T LUAD 23429051 + 23429031 23429071 41 ACCCCCACCGGACCTACAACCCGCAGTCCCACATCATCTCA ACCCCCACCGGACCTACAACCCGCTGTCCCACATCATCTCA < 41bp 0.817945298608306 0.529907246444845 0.26399153 0.24087355 prediction 0.576076104326923 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429051 chr8:23429055 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_56512 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr19 11143980 11143980 1 + G T UCEC 11143978 + 11143958 11143998 41 TCCCCCAGGACCTGCAAGCGCAGGACCGAGCCCACCGCATC TCCCCCAGGACCTGCAAGCGCATGACCGAGCCCACCGCATC < 41bp 0.84087297182391 0.552866094425579 0.916018 0.5639201 prediction 0.576013754796662 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11143978 chr19:11143980 nonsynonymous SNV 0.972 4 23 hm5C_associated_SNPs_56514 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11143977-11143999
64251 chr1 110884828 110884828 1 + A C UCEC 110884824 + 110884804 110884844 41 GTGAGTTCTCCCAGCAGTTCCTGGATTCCCCTGCCAAGGCA GTGAGTTCTCCCAGCAGTTCCTGGCTTCCCCTGCCAAGGCA < 41bp 0.898197323155022 0.610213372487775 0.73192704 0.24410155 prediction 0.575967901334495 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884824 chr1:110884828 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_56519 0 0 16 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:110884780-110884840
64251 chr10 116702425 116702425 1 + A C rs34393297 116702421 + 116702401 116702441 41 TAGAAGCTGGAATGCCTTCTCCAGAATGGACCAAGAGGAAA TAGAAGCTGGAATGCCTTCTCCAGCATGGACCAAGAGGAAA < 41bp 0.787942620792898 0.399637526050316 0.12653953 0.05955261 prediction 0.575885241585795 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116702421 chr10:116702425 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_56523 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:116702424-116702425
64251 chr17 34937864 34937864 1 + G T COAD 34937861 + 34937841 34937881 41 AACGAGTAAGAGAACTCAAGCAAGAAAAGAAACGCCAAAAA AACGAGTAAGAGAACTCAAGCAATAAAAGAAACGCCAAAAA < 41bp 0.78793490993213 0.423215156465664 0.63352305 0.1904951 prediction 0.575869819864259 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34937861 chr17:34937864 stopgain 0.998 1 24 hm5C_associated_SNPs_56525 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:34937834-34937866
64251 chrX 47444366 47444366 1 + A C rs141614092 47444362 + 47444342 47444382 41 GGCCAAGTTCGTGGGGACACCAGAAGTCAACCAGACCACCT GGCCAAGTTCGTGGGGACACCAGACGTCAACCAGACCACCT < 41bp 0.813740584780559 0.525830214675422 0.60120773 0.39721447 prediction 0.575820740210276 Functional Loss - TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47444362 chrX:47444366 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_56528 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47444346-47444399
64251 chr3 50255842 50255842 1 + G T LUSC 50255839 + 50255819 50255859 41 GGGCAGAGGCCTAGGCTAGGCTGGGGGGAAGGGGCTGGTTG GGGCAGAGGCCTAGGCTAGGCTGTGGGGAAGGGGCTGGTTG < 41bp 0.866983077312031 0.579080737380083 0.4562074 0.21446943 prediction 0.575804679863895 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50255839 chr3:50255842 . . 0 24 hm5C_associated_SNPs_56530 0 0 11 BUD13 POSTAR2 ENCODE chr3:50255812-50255882
64251 chr19 50550301 50550301 1 + G T SARC 50550299 + 50550279 50550319 41 ATCAGCGTGTACACAACAAGCAGCAATACTGCCTGTAGCCA ATCAGCGTGTACACAACAAGCATCAATACTGCCTGTAGCCA < 41bp 0.787885582357624 0.467709947490556 0.28264886 0.18551597 prediction 0.575771164715247 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50550299 chr19:50550301 nonsynonymous SNV 0.019 1 23 hm5C_associated_SNPs_56535 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50550287-50550316
64251 chr7 66410077 66410077 1 + G C LUSC 66410076 + 66410056 66410096 41 CCGGAAAGTACAATGACCAGCGGGCAGGCCCGAGCTTCCAC CCGGAAAGTACAATGACCAGCCGGCAGGCCCGAGCTTCCAC < 41bp 0.803404982984886 0.515566087281141 0.6810465 0.27815384 prediction 0.575677791407489 Functional Loss - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66410076 chr7:66410077 nonsynonymous SNV 0.904 2 22 hm5C_associated_SNPs_56541 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:66410041-66410101
64251 chr7 94139496 94139496 1 + G T CESC 94139493 + 94139473 94139513 41 CGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCC CGCTGGTGGCCGTGCTGCTGCTCTCAGCGTGCCACCTCGCC < 41bp 0.78783800241784 0.433855103249054 0.24021378 0.060337037 prediction 0.575676004835681 Functional Loss - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94139493 chr7:94139496 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_56542 0 0 1 PPIG POSTAR2 ENCODE chr7:94139404-94139528
64251 chr2 242758149 242758149 1 + G T LUAD 242758146 + 242758126 242758166 41 CCGCGCAGCTGGACAGAGCCCTGGGTGATCTACGAGGGCCC CCGCGCAGCTGGACAGAGCCCTGTGTGATCTACGAGGGCCC < 41bp 0.894865226123493 0.607030064891623 0.8849522 0.5376943 prediction 0.575670322463742 Functional Loss - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758146 chr2:242758149 nonsynonymous SNV 0.982 5 24 hm5C_associated_SNPs_56543 0 0 1 DDX55 POSTAR2 ENCODE chr2:242758107-242758202
64251 chr5 102522089 102522089 1 + G T LUAD 102522086 + 102522066 102522106 41 CTTCAAGCGCACCTAACCTACAGGATTATGCTCGTACTCAT CTTCAAGCGCACCTAACCTACAGTATTATGCTCGTACTCAT < 41bp 0.868408909032804 0.58058153949818 0.8862166 0.48707604 prediction 0.575654739069248 Functional Loss - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102522086 chr5:102522089 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56546 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:102522071-102522092
64251 chr15 67073541 67073541 1 + A T LGG 67073537 + 67073517 67073557 41 TCGGTGCGGCGAACGCGCAGCAAGATCGGCTTCGGCATCCT TCGGTGCGGCGAACGCGCAGCAAGTTCGGCTTCGGCATCCT < 41bp 0.787818895371737 0.499650864737405 0.28074154 0.25162855 prediction 0.575637790743473 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073537 chr15:67073541 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_56548 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:67073537-67073563
64251 chr4 57861496 57861496 1 + G T MESO 57861493 + 57861473 57861513 41 GGATTCTAAATATGCCTACACAGGAGAGTGTAGATCATGTC GGATTCTAAATATGCCTACACAGTAGAGTGTAGATCATGTC < 41bp 0.787810803376708 0.415567341405904 0.3133545 0.08165389 prediction 0.575621606753416 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57861493 chr4:57861496 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_56551 0 0 8 LIN28A POSTAR2 GSE39873,GSM980594 chr4:57861480-57861500
64251 chr12 112578769 112578769 1 + G T BLCA 112578767 + 112578747 112578787 41 GCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTT GCAATGTCCTTGTGAAAGATCTTAAGACTCACCCTGAAGTT < 41bp 0.787803080545645 0.462364131482519 0.109429 0.027908444 prediction 0.575606161091289 Functional Loss - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112578767 chr12:112578769 synonymous SNV . 0 23 hm5C_associated_SNPs_56552 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112578758-112578783
64251 chr19 58288009 58288009 1 + G T SKCM 58288007 + 58287987 58288027 41 GCCTGTACCGTGACGTGATGCTGGAGACCTTGACACTTATA GCCTGTACCGTGACGTGATGCTTGAGACCTTGACACTTATA < 41bp 0.833160130113012 0.54539095759081 0.41287455 0.098661065 prediction 0.575538345044405 Functional Loss - ZNF586 ENSG00000083828 CDS Human protein_coding chr19:58288007 chr19:58288009 synonymous SNV . 0 23 hm5C_associated_SNPs_56557 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:58287983-58288015
64251 chr4 78806491 78806491 1 + G T UCEC 78806489 + 78806469 78806509 41 CAATAAAGTTGCTGTATTTACAGAGGTGAGTAACTTCCGTC CAATAAAGTTGCTGTATTTACATAGGTGAGTAACTTCCGTC < 41bp 0.787768662973996 0.483251422235124 0.9114943 0.33521557 prediction 0.575537325947992 Functional Loss - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78806489 chr4:78806491 stopgain 0.970 0 23 hm5C_associated_SNPs_56558 0 0 1 BUD13 POSTAR2 ENCODE chr4:78806438-78806496
64251 chr1 149858790 149858790 1 + G C OV 149858789 + 149858769 149858809 41 GTCACCTCCAGCTGGCCATCCGCAACGACGAGGAACTGAAC GTCACCTCCAGCTGGCCATCCCCAACGACGAGGAACTGAAC < 41bp 0.789778518508978 0.502018520400117 0.12957188 0.17184144 prediction 0.575519996217721 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858789 chr1:149858790 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_56560 0 0 1 METAP2 POSTAR2 ENCODE chr1:149858782-149858871
64251 chr16 28878225 28878225 1 + G T THYM 28878223 + 28878203 28878243 41 CTGACCCAGCCGGAGTGGGCCGGGGAGGAGGGGTGGCTGGG CTGACCCAGCCGGAGTGGGCCGTGGAGGAGGGGTGGCTGGG < 41bp 0.787756893500214 0.458210837975518 0.92123985 0.8704146 prediction 0.575513787000429 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28878223 chr16:28878225 synonymous SNV . 0 23 hm5C_associated_SNPs_56561 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28878220-28878240
64251 chr2 96993785 96993785 1 + G T SARC 96993783 + 96993763 96993803 41 GGGCCCACAACATGCTCTCTCAGCGGCTCCAGGACATTCTC GGGCCCACAACATGCTCTCTCATCGGCTCCAGGACATTCTC < 41bp 0.854841993248382 0.567106450533746 0.72692627 0.16775274 prediction 0.575471085429272 Functional Loss - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96993783 chr2:96993785 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_56563 0 0 1 IGF2BP1 POSTAR2 ENCODE chr2:96993727-96993820
64251 chr15 98509148 98509148 1 + G T UCEC 98509145 + 98509125 98509165 41 ACCTTTGGTCACCTCGTTTACTGGGAAATATGGAAGCATTC ACCTTTGGTCACCTCGTTTACTGTGAAATATGGAAGCATTC < 41bp 0.787718972821284 0.408443218815585 0.33497608 0.088905096 prediction 0.575437945642567 Functional Loss - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98509145 chr15:98509148 nonsynonymous SNV 0.969 4 24 hm5C_associated_SNPs_56565 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:98509145-98509167
64251 chr11 46727238 46727238 1 + G T LUAD 46727236 + 46727216 46727256 41 CCACAACTGCTGGACACACACAGAGAGGAGGAAGTCTCCCC CCACAACTGCTGGACACACACATAGAGGAGGAAGTCTCCCC < 41bp 0.845535324218233 0.557818094343153 0.8967907 0.34311074 prediction 0.575434459750161 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46727236 chr11:46727238 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_56566 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:46727218-46727256
64251 chr13 41383861 41383861 1 + G T rs17090557 41383858 + 41383838 41383878 41 TTGAGGACTACAGTTCATCTCAGGGTTTCTTGGAGTACAAG TTGAGGACTACAGTTCATCTCAGTGTTTCTTGGAGTACAAG < 41bp 0.78771421718814 0.411409586797322 0.9247583 0.103904635 prediction 0.57542843437628 Functional Loss - TPTE2P5 ENSG00000102743 UTR3 Human protein_coding chr13:41383858 chr13:41383861 . . 0 24 hm5C_associated_SNPs_56567 1 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:41383845-41383874
64251 chr7 127231325 127231325 1 + G T LUSC 127231323 + 127231303 127231343 41 GGTCTGTACGATGGTCTGGACTGGCTGTCCCACGAGCTGTC GGTCTGTACGATGGTCTGGACTTGCTGTCCCACGAGCTGTC < 41bp 0.787663702830137 0.475203629751967 0.41724 0.31606784 prediction 0.575327405660275 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231323 chr7:127231325 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_56570 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr7:127231304-127231336
64251 chr6 35280290 35280290 1 + A T LIHC 35280286 + 35280266 35280306 41 TGGCCATCCACGAGGTCTACCAGGAGCTCATCCAAGATGTC TGGCCATCCACGAGGTCTACCAGGTGCTCATCCAAGATGTC < 41bp 0.787637291764823 0.492468579707908 0.9078053 0.91986275 prediction 0.575274583529646 Functional Loss - DEF6 ENSG00000023892 CDS Human protein_coding chr6:35280286 chr6:35280290 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_56574 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:35280271-35280298
64251 chr16 3705910 3705910 1 + G C ACC 3705909 + 3705889 3705929 41 AGAGACAGCCACCTGACTGCCGTGGGGAAGCTGCTGGACAA AGAGACAGCCACCTGACTGCCCTGGGGAAGCTGCTGGACAA < 41bp 0.809484420996495 0.521891662437068 0.8434899 0.25444296 prediction 0.575185517118854 Functional Loss - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3705909 chr16:3705910 nonsynonymous SNV 0.906 1 22 hm5C_associated_SNPs_56578 0 0 1 DDX24 POSTAR2 ENCODE chr16:3705852-3705917
64251 chrX 13337235 13337235 1 + A C STAD 13337231 + 13337211 13337251 41 TTTCTTCGGCTGTTCTGAAGCAGGAGTTACACATGATGTCT TTTCTTCGGCTGTTCTGAAGCAGGCGTTACACATGATGTCT < 41bp 0.887857374050619 0.600298763530683 0.8804226 0.8609507 prediction 0.575117221039873 Functional Loss - ATXN3L ENSG00000123594 CDS Human protein_coding chrX:13337231 chrX:13337235 synonymous SNV . 0 25 hm5C_associated_SNPs_56583 0 0 3 U2AF1 POSTAR2 ENCODE chrX:13337212-13337248
64251 chr19 10794426 10794426 1 + G T LGG 10794423 + 10794403 10794443 41 TCCGGGGACGAGGGCGCGGGCGAGGATTTGGTGGCGCCAAC TCCGGGGACGAGGGCGCGGGCGATGATTTGGTGGCGCCAAC < 41bp 0.892538399385028 0.604984336038738 0.90236163 0.8195517 prediction 0.575108126692581 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794423 chr19:10794426 stopgain 0.963 1 24 hm5C_associated_SNPs_56584 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:10794389-10794440
64251 chr8 95655613 95655613 1 + G T CESC 95655611 + 95655591 95655631 41 ACTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGA ACTGATGGGCAGCTTCATGTCATGCAAATCCTGCATCCTGA < 41bp 0.787542015047613 0.4504179606944 0.6401806 0.15735662 prediction 0.575084030095226 Functional Loss - ESRP1 ENSG00000104413 CDS Human protein_coding chr8:95655611 chr8:95655613 nonsynonymous SNV 0.979 4 23 hm5C_associated_SNPs_56587 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:95655590-95655628
64251 chr10 111967743 111967743 1 + G T UCEC 111967740 + 111967720 111967760 41 TCAGACATTTTCAACACCAGCGAGAACTCGATGGAGAAGCA TCAGACATTTTCAACACCAGCGATAACTCGATGGAGAAGCA < 41bp 0.787523079098986 0.417432542738052 0.35579655 0.31009036 prediction 0.575046158197972 Functional Loss - MXI1 ENSG00000119950 CDS Human protein_coding chr10:111967740 chr10:111967743 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_56590 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:111967734-111967753
64251 chr11 608969 608969 1 + G T HNSC 608966 + 608946 608986 41 CGGTCCCCAAGCTCGGAGCACAGGGCACGGGAGCACAGGCG CGGTCCCCAAGCTCGGAGCACAGTGCACGGGAGCACAGGCG < 41bp 0.787508473191044 0.398810382151493 0.8971672 0.5596056 prediction 0.575016946382089 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608966 chr11:608969 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_56592 0 0 1 RPS3 POSTAR2 ENCODE chr11:608949-608994
64251 chr17 48458662 48458662 1 - C A rs78410714 48458665 - 48458645 48458685 41 AGCCAACCCGCAGCTTCACTCACGACTTCAAGATTTGATGC AGCCAACCCGCAGCTTCACTCACTACTTCAAGATTTGATGC < 41bp 0.787505083701407 0.493750788603167 0.29690003 0.13682157 prediction 0.575010167402815 Functional Loss - EME1;LRRC59 ENSG00000108829;ENSG00000154920 UTR3 Human other chr17:48458665 chr17:48458662 . . 0 24 hm5C_associated_SNPs_56593 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:48458631-48458668
64251 chr12 1863555 1863555 1 + G T UCEC 1863552 + 1863532 1863572 41 GATTGGGGTGCAGCAGGACTCCAGAGCCAGATATAAGGCTC GATTGGGGTGCAGCAGGACTCCATAGCCAGATATAAGGCTC < 41bp 0.883606509599088 0.596102996917834 0.86686194 0.37315154 prediction 0.575007025362509 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1863552 chr12:1863555 stopgain 1.000 1 24 hm5C_associated_SNPs_56594 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:1863528-1863559
64251 chr12 69993777 69993777 1 + G T BLCA 69993775 + 69993755 69993795 41 TGTGGACAACATCATCAAAGCGGCACCCAGGTACCCTAACA TGTGGACAACATCATCAAAGCGTCACCCAGGTACCCTAACA < 41bp 0.787497977856318 0.474848060756726 0.078989685 0.02050975 prediction 0.574995955712637 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69993775 chr12:69993777 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_56595 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69993668-69993782
64251 chr1 118472382 118472382 1 + G T rs115881551 118472380 + 118472360 118472400 41 GTCTTGTGGGCGGGTCCAATCGGCTGGGAGCCTCGTGGAGG GTCTTGTGGGCGGGTCCAATCGTCTGGGAGCCTCGTGGAGG < 41bp 0.840664628062205 0.553182449364775 0.89346236 0.47902745 prediction 0.57496435739486 Functional Loss - WDR3 ENSG00000065183 UTR5 Human protein_coding chr1:118472380 chr1:118472382 . . 0 23 hm5C_associated_SNPs_56597 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:118472378-118472397
64251 chr11 65687863 65687863 1 + G T LUAD 65687860 + 65687840 65687880 41 AGTTTGACTTCTTGAAGGACCTGGTGGCATCTGTTCCCGAC AGTTTGACTTCTTGAAGGACCTGTTGGCATCTGTTCCCGAC < 41bp 0.787481650967258 0.407907157678887 0.24679843 0.04075539 prediction 0.574963301934517 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65687860 chr11:65687863 nonsynonymous SNV 0.966 4 24 hm5C_associated_SNPs_56598 0 0 10 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:65687848-65687870
64251 chr4 30724425 30724425 1 + A C LUSC 30724421 + 30724401 30724441 41 GGCGAGAACGGGGTGGTCACCTGCACCGTGGTGGGCGACGT GGCGAGAACGGGGTGGTCACCTGCCCCGTGGTGGGCGACGT < 41bp 0.787464829338152 0.399966556129505 0.60977566 0.33469495 prediction 0.574929658676305 Functional Loss - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724421 chr4:30724425 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_56603 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30724407-30724434
64251 chr7 77539675 77539675 1 + G T SARC 77539673 + 77539653 77539693 41 CACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAG CACGGTACAAGCACCTCTCACATCGTTGGCACTGTCTTCAG < 41bp 0.822893022746651 0.535459056358643 0.78887296 0.17214787 prediction 0.574867932776017 Functional Loss - PHTF2 ENSG00000006576 CDS Human protein_coding chr7:77539673 chr7:77539675 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_56606 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:77539664-77539677
64251 chr2 234102591 234102591 1 + G C BLCA 234102590 + 234102570 234102610 41 GCAGACCTCTCAGGGCAAGACGAGGGAGAAGCTCTATGGTA GCAGACCTCTCAGGGCAAGACCAGGGAGAAGCTCTATGGTA < 41bp 0.787405028301646 0.494346101636335 0.498419 0.38971448 prediction 0.574810056603292 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234102590 chr2:234102591 synonymous SNV . 0 22 hm5C_associated_SNPs_56611 0 0 1 PPIG POSTAR2 ENCODE chr2:234102562-234102604
64251 chr14 21167910 21167910 1 + G T UCEC 21167907 + 21167887 21167927 41 CTGCAGATATCGGGCCATAGCGAGCACTAGACGTGTTGTCA CTGCAGATATCGGGCCATAGCGATCACTAGACGTGTTGTCA < 41bp 0.787399232299172 0.396141054861206 0.911788 0.29179734 prediction 0.574798464598345 Functional Loss - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167907 chr14:21167910 nonsynonymous SNV 0.090 0 24 hm5C_associated_SNPs_56612 0 0 3 RPS3 POSTAR2 ENCODE chr14:21167867-21167911
64251 chr11 117153552 117153552 1 + G T GBM 117153550 + 117153530 117153570 41 TTCTGCCCAAGTTTCATATCCTGGAAGGTCTTCACATGTAA TTCTGCCCAAGTTTCATATCCTTGAAGGTCTTCACATGTAA < 41bp 0.787387987490513 0.475148039235367 0.2165876 0.061878443 prediction 0.574775974981026 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117153550 chr11:117153552 stopgain 1.000 1 23 hm5C_associated_SNPs_56616 0 0 1 DDX24 POSTAR2 ENCODE chr11:117153527-117153563
64251 chr1 154247910 154247910 1 + G T LUAD 154247907 + 154247887 154247927 41 ACTGTGGTGGACAGTGAGGGCCGGACAGAGACTACAGTAAC ACTGTGGTGGACAGTGAGGGCCGTACAGAGACTACAGTAAC < 41bp 0.787382689502 0.423670241703515 0.109314114 0.056239367 prediction 0.574765379003999 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154247907 chr1:154247910 synonymous SNV . 0 24 hm5C_associated_SNPs_56617 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:154247868-154247912
64251 chr17 41001160 41001160 1 + G T LUSC 41001158 + 41001138 41001178 41 TTTAAACCTGTGGCTGCCCCCTGGAACCCGGAGCACTGGCT TTTAAACCTGTGGCTGCCCCCTTGAACCCGGAGCACTGGCT < 41bp 0.842326761494301 0.55494688171162 0.35322604 0.1138871 prediction 0.574759759565362 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41001158 chr17:41001160 nonsynonymous SNV 0.497 4 23 hm5C_associated_SNPs_56618 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41001129-41001161
64251 chr15 76630847 76630847 1 + A C rs575998550 76630843 + 76630823 76630863 41 CGCTTCCCGGCGCCCGCGGCCTGCATCTGCCCGGTAAGCGC CGCTTCCCGGCGCCCGCGGCCTGCCTCTGCCCGGTAAGCGC < 41bp 0.889026747470645 0.601685163265851 0.30441234 0.10023481 prediction 0.574683168409588 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630843 chr15:76630847 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_56620 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:76630824-76630855
64251 chr10 70706374 70706374 1 + G T CESC 70706372 + 70706352 70706392 41 CAAGAAGTGGGGGCCACAAACGGAGTTTTGACTGAGTATTT CAAGAAGTGGGGGCCACAAACGTAGTTTTGACTGAGTATTT < 41bp 0.827736918762926 0.540402943048071 0.9022682 0.67577595 prediction 0.57466795142971 Functional Loss - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70706372 chr10:70706374 synonymous SNV 0.999 0 23 hm5C_associated_SNPs_56622 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr10:70706370-70706394
64251 chr16 77228398 77228398 1 + G T HNSC 77228396 + 77228376 77228416 41 CCCGCATCTTCGCACACAAGCAGAACTATGACCTCCGCCGC CCCGCATCTTCGCACACAAGCATAACTATGACCTCCGCCGC < 41bp 0.787315888264911 0.444621698254074 0.6277868 0.24536288 prediction 0.574631776529822 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228396 chr16:77228398 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56624 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:77228366-77228425
64251 chr9 139888114 139888114 1 + G T UCEC 139888111 + 139888091 139888131 41 TCGCTCATCAACCCCGGGTTCAAGAGGTACCCTCCCACAGC TCGCTCATCAACCCCGGGTTCAATAGGTACCCTCCCACAGC < 41bp 0.891934885659679 0.604628484312454 0.9246479 0.29558873 prediction 0.574612802694451 Functional Loss - C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139888111 chr9:139888114 nonsynonymous SNV 0.975 4 24 hm5C_associated_SNPs_56626 0 0 4 FUS POSTAR2 SRX029328 chr9:139888093-139888114
64251 chr17 79639635 79639635 1 + G T UCEC 79639633 + 79639613 79639653 41 TTGTGGAGGAGGAGAGAGAGCGGGCCGTGCAGGCCTACAGA TTGTGGAGGAGGAGAGAGAGCGTGCCGTGCAGGCCTACAGA < 41bp 0.843035054072015 0.555729949642677 0.90291536 0.32593256 prediction 0.574610208858675 Functional Loss - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79639633 chr17:79639635 synonymous SNV . 0 23 hm5C_associated_SNPs_56627 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:79639611-79639639
64251 chr14 29237049 29237049 1 + G T LUAD 29237046 + 29237026 29237066 41 AAGCCGCCGTTCAGCTACAACGCGCTCATCATGATGGCCAT AAGCCGCCGTTCAGCTACAACGCTCTCATCATGATGGCCAT < 41bp 0.787286731509779 0.407149942318786 0.15420887 0.09333813 prediction 0.574573463019557 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237046 chr14:29237049 synonymous SNV . 0 24 hm5C_associated_SNPs_56630 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:29237046-29237082
64251 chr12 121838278 121838278 1 + G T rs187357001 121838275 + 121838255 121838295 41 AGCCGGGCGTCCCTAGCGTTCGCGCCGGGTGGGCCCCTCTC AGCCGGGCGTCCCTAGCGTTCGCTCCGGGTGGGCCCCTCTC < 41bp 0.787180475401248 0.419864105005785 0.33375302 0.16218671 prediction 0.574360950802496 Functional Loss - RNF34 ENSG00000170633 intronic Human protein_coding chr12:121838275 chr12:121838278 . . 0 24 hm5C_associated_SNPs_56639 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:121838230-121838301
64251 chr4 187209686 187209686 1 + G T SKCM 187209684 + 187209664 187209704 41 ATCACGAGCTGGGGCGAAGGCTGTGCTCAAAGGGAGCGGCC ATCACGAGCTGGGGCGAAGGCTTTGCTCAAAGGGAGCGGCC < 41bp 0.787178971452919 0.460985592094845 0.04959792 0.018313825 prediction 0.574357942905838 Functional Loss - F11 ENSG00000088926 CDS Human protein_coding chr4:187209684 chr4:187209686 nonsynonymous SNV 0.986 5 23 hm5C_associated_SNPs_56641 0 0 3 DDX3X POSTAR2 ENCODE chr4:187209636-187209688
64251 chr8 11660353 11660353 1 + G T UCEC 11660350 + 11660330 11660370 41 GCCTGCGCCAGGATGGAGTTCGTGAAATGCCTTGGCCACCC GCCTGCGCCAGGATGGAGTTCGTTAAATGCCTTGGCCACCC < 41bp 0.870699463637445 0.583556952420297 0.89955485 0.5722013 prediction 0.574285022434297 Functional Loss - FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11660350 chr8:11660353 synonymous SNV . 0 24 hm5C_associated_SNPs_56649 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:11660300-11660360
64251 chr19 21579963 21579963 1 + G T rs148395876 21579961 + 21579941 21579981 41 TCTCTCTGCTGCCGGAGCTCCAGGTCTACCCTTCACTGCTC TCTCTCTGCTGCCGGAGCTCCATGTCTACCCTTCACTGCTC < 41bp 0.787102223529501 0.45849689262638 0.92453754 0.12800923 prediction 0.574204447059002 Functional Loss - ZNF493 ENSG00000196268 UTR5 Human protein_coding chr19:21579961 chr19:21579963 . . 0 23 hm5C_associated_SNPs_56656 0 0 2 PPIG POSTAR2 ENCODE chr19:21579957-21580120
64251 chr14 105930894 105930894 1 + G T BLCA 105930892 + 105930872 105930912 41 GGAGAGAGGCCAGGACCAAACCGCAGTAACATGGTAAGGGG GGAGAGAGGCCAGGACCAAACCTCAGTAACATGGTAAGGGG < 41bp 0.845003151788281 0.557915900124283 0.4453625 0.27635652 prediction 0.574174503327997 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105930892 chr14:105930894 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_56659 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105930851-105930897
64251 chr7 75608805 75608805 1 + G T UCEC 75608803 + 75608783 75608823 41 CGTGTTCTACGGCTCCCAGACGGGGACTGCAGAGGAGTTTG CGTGTTCTACGGCTCCCAGACGTGGACTGCAGAGGAGTTTG < 41bp 0.864232389968395 0.577147539652488 0.8478393 0.35804266 prediction 0.574169700631813 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75608803 chr7:75608805 nonsynonymous SNV 0.982 5 23 hm5C_associated_SNPs_56660 0 0 12 DDX24 POSTAR2 ENCODE chr7:75608768-75608871
64251 chr7 102065493 102065493 1 + A C ESCA 102065489 + 102065469 102065509 41 CAGCCCAAGGAGCAGGGGTCCAGCAGCTCTGCGGAGGCATC CAGCCCAAGGAGCAGGGGTCCAGCCGCTCTGCGGAGGCATC < 41bp 0.787067734865711 0.39812189193552 0.75129604 0.27225602 prediction 0.574135469731421 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102065489 chr7:102065493 nonsynonymous SNV 0.619 0 25 hm5C_associated_SNPs_56662 0 0 4 GRWD1 POSTAR2 ENCODE chr7:102065488-102065663
64251 chr19 15784348 15784348 1 + G T LUAD 15784346 + 15784326 15784366 41 CTCTGCCCTGCAGGATGTCGCTGCTGAGCCTGCCCTGGCTG CTCTGCCCTGCAGGATGTCGCTTCTGAGCCTGCCCTGGCTG < 41bp 0.787042972389333 0.447543414954261 0.37038034 0.11124024 prediction 0.574085944778667 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784346 chr19:15784348 synonymous SNV . 0 23 hm5C_associated_SNPs_56667 0 0 7 BUD13 POSTAR2 ENCODE chr19:15784329-15784422
64251 chr3 49044932 49044932 1 + G T rs62262472 49044929 + 49044909 49044949 41 GCTTATACTCCTCCCAGTGACGGGTCTGGAGTGCGTGGGGG GCTTATACTCCTCCCAGTGACGGTTCTGGAGTGCGTGGGGG < 41bp 0.787035324193235 0.452907223528904 0.36588502 0.10642034 prediction 0.574070648386469 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49044929 chr3:49044932 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_56669 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:49044927-49044957
64251 chr5 110075051 110075051 1 + G T UCEC 110075048 + 110075028 110075068 41 TCCACCCCGTACGAAGGCCCCACGGAGGAACCCTTTTCCAG TCCACCCCGTACGAAGGCCCCACTGAGGAACCCTTTTCCAG < 41bp 0.88439550330073 0.597377954068606 0.063712806 0.028950036 prediction 0.574035098464249 Functional Loss - SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110075048 chr5:110075051 synonymous SNV . 0 24 hm5C_associated_SNPs_56670 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110074997-110075051
64251 chr9 139840540 139840540 1 + G T CESC 139840537 + 139840517 139840557 41 CTACTGTGGCTCTGCCCCAGCCCGAGACGCCCGAGGGGCTG CTACTGTGGCTCTGCCCCAGCCCTAGACGCCCGAGGGGCTG < 41bp 0.787011146842837 0.404225208994739 0.31035507 0.11281839 prediction 0.574022293685675 Functional Loss - C8G ENSG00000176919 CDS Human protein_coding chr9:139840537 chr9:139840540 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_56672 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:139840471-139840552
64251 chr4 7774651 7774651 1 - C A UCEC 7774654 - 7774634 7774674 41 AGGAGGCGGAGCGTGTCAGCCTGGAGCTGGAGCTGACGGAG AGGAGGCGGAGCGTGTCAGCCTGTAGCTGGAGCTGACGGAG < 41bp 0.884922614715467 0.59792780711635 0.4987271 0.20555288 prediction 0.573989615198234 Functional Loss - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7774654 chr4:7774651 stopgain 0.984 1 24 hm5C_associated_SNPs_56674 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:7774630-7774685
64251 chr12 32854484 32854484 1 + G T LGG 32854482 + 32854462 32854502 41 AGAAGATAAACGGAAAACAACAGGAGAAGAAAATGGTAAAT AGAAGATAAACGGAAAACAACATGAGAAGAAAATGGTAAAT < 41bp 0.817330409133191 0.530342656957261 0.90446925 0.5580977 prediction 0.57397550435186 Functional Loss - DNM1L ENSG00000087470 CDS Human protein_coding chr12:32854482 chr12:32854484 stopgain 1.000 1 23 hm5C_associated_SNPs_56677 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067861 chr12:32854454-32854492
64251 chr11 126110725 126110725 1 + A C HNSC 126110721 + 126110701 126110741 41 GCTTAAAAACTAAGAAGCCTCGAGAACTTGTGCTAGTGATT GCTTAAAAACTAAGAAGCCTCGAGCACTTGTGCTAGTGATT < 41bp 0.786987288549006 0.390068008380079 0.5536839 0.28160763 prediction 0.573974577098012 Functional Loss - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126110721 chr11:126110725 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_56678 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr11:126110709-126110733
64251 chr1 10689963 10689963 1 + G T SARC 10689960 + 10689940 10689980 41 GGGGTGCAGAGGGAGGACCGCCGGGGCGGGGATGGGCAGAT GGGGTGCAGAGGGAGGACCGCCGTGGCGGGGATGGGCAGAT < 41bp 0.786984671399852 0.41540072857073 0.8737899 0.7069695 prediction 0.573969342799704 Functional Loss - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689960 chr1:10689963 synonymous SNV . 0 24 hm5C_associated_SNPs_56681 0 0 13 BUD13 POSTAR2 ENCODE chr1:10689894-10689968
64251 chr16 1825398 1825398 1 + G T KIRC 1825396 + 1825376 1825416 41 CGAGGTGGCCGTCAGCTGGCCGGAGGTGGAAGAGGTGAGGG CGAGGTGGCCGTCAGCTGGCCGTAGGTGGAAGAGGTGAGGG < 41bp 0.786957304143229 0.453294915784788 0.90313256 0.8342495 prediction 0.573914608286457 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825396 chr16:1825398 stopgain 0.122 0 23 hm5C_associated_SNPs_56685 0 0 4 BUD13 POSTAR2 ENCODE chr16:1825385-1825413
64251 chr14 105054645 105054645 1 + G T LUAD 105054642 + 105054622 105054662 41 AAGAACGCCACAGCCACTGTCAGGGGTGAGTTCTGAGCCCA AAGAACGCCACAGCCACTGTCAGTGGTGAGTTCTGAGCCCA < 41bp 0.894197173108978 0.607241427204449 0.96031845 0.37289977 prediction 0.573911491809057 Functional Loss - C14orf180 ENSG00000184601 CDS Human protein_coding chr14:105054642 chr14:105054645 nonsynonymous SNV 0.050 0 24 hm5C_associated_SNPs_56687 0 0 1 DGCR8 POSTAR2 ENCODE chr14:105054644-105054681
64251 chr9 91930186 91930186 1 + G T THCA 91930184 + 91930164 91930204 41 GGTGTCCAACAGAGTCTAGGCTGGGTTCATTACATGATTCA GGTGTCCAACAGAGTCTAGGCTTGGTTCATTACATGATTCA < 41bp 0.836946747091832 0.550009220560736 0.39216775 0.18835104 prediction 0.573875053062191 Functional Loss - CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930184 chr9:91930186 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_56690 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:91930177-91930198
64251 chr17 78796025 78796025 1 + G T BLCA 78796022 + 78796002 78796042 41 ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGA ATCCCTGGCCGCCTGAACGACAGTAGGACGCCCCTGGGTGA < 41bp 0.786920985607284 0.415707073131384 0.80149937 0.15855056 prediction 0.573841971214568 Functional Loss - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78796022 chr17:78796025 nonsynonymous SNV 0.953 4 24 hm5C_associated_SNPs_56693 0 0 3 BUD13 POSTAR2 ENCODE chr17:78795989-78796060
64251 chrX 54950927 54950927 1 + G T LUAD 54950925 + 54950905 54950945 41 GAGAGAAGTGGCAGTAATTACAGGCGGATCCCATGGGGCCG GAGAGAAGTGGCAGTAATTACATGCGGATCCCATGGGGCCG < 41bp 0.786906689110867 0.444554224028272 0.9095259 0.8819573 prediction 0.573813378221734 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54950925 chrX:54950927 nonsynonymous SNV 0.169 2 23 hm5C_associated_SNPs_56697 0 0 2 BUD13 POSTAR2 ENCODE chrX:54950891-54950966
64251 chr14 71109059 71109059 1 + G T BRCA 71109056 + 71109036 71109076 41 GGGGCGCAGTGCTACAAGGACAAGAAATTCCGTGAAGCCAT GGGGCGCAGTGCTACAAGGACAATAAATTCCGTGAAGCCAT < 41bp 0.786887770308232 0.410721347621662 0.41110006 0.23901263 prediction 0.573775540616465 Functional Loss - TTC9 ENSG00000133985 CDS Human protein_coding chr14:71109056 chr14:71109059 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_56700 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:71109049-71109085
64251 chr19 1037863 1037863 1 + A C COAD 1037859 + 1037839 1037879 41 CCCGGACCCGGGGGAGGTCCCTGAATATCCCCCTTACTACC CCCGGACCCGGGGGAGGTCCCTGACTATCCCCCTTACTACC < 41bp 0.895061957686555 0.608189853127948 0.9273163 0.79452753 prediction 0.573744209117214 Functional Loss - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037859 chr19:1037863 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_56703 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1037861-1037897
64251 chr1 32566070 32566070 1 + G T rs141953556 32566068 + 32566048 32566088 41 CTGAAGAATGCATGTGGCCGCAGGGCGTGCTGGTGAAGCAC CTGAAGAATGCATGTGGCCGCATGGCGTGCTGGTGAAGCAC < 41bp 0.786868515874786 0.464540971484128 0.5096656 0.36247092 prediction 0.573737031749572 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32566068 chr1:32566070 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_56704 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:32566042-32566082
64251 chr1 224559031 224559031 1 + G T UCEC 224559029 + 224559009 224559049 41 CATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGC CATGGGAGTGTTTGATCCAACATAAATACACAATCGAGGGC < 41bp 0.786852838605894 0.470149773198663 0.31959012 0.059298098 prediction 0.573705677211789 Functional Loss - CNIH4;CNIH4 ENSG00000143771 CDS Human protein_coding chr1:224559029 chr1:224559031 stopgain 1.000 1 23 hm5C_associated_SNPs_56705 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr1:224558984-224559031
64251 chr14 24607997 24607997 1 + G T UCEC 24607994 + 24607974 24608014 41 CTTCGAGAAGCTCAAGAAGCCCAGGGGAGAAACAAAGGGAA CTTCGAGAAGCTCAAGAAGCCCATGGGAGAAACAAAGGGAA < 41bp 0.786831732032853 0.438518485866273 0.5076525 0.06513369 prediction 0.573663464065705 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607994 chr14:24607997 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_56706 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24607950-24608044
64251 chr7 98249017 98249017 1 + G T STAD 98249015 + 98248995 98249035 41 GCGACTTCCGCGAGGTGCTCCAGCAGCGGCTGGGGGAGCTG GCGACTTCCGCGAGGTGCTCCATCAGCGGCTGGGGGAGCTG < 41bp 0.858701398409044 0.571917691602424 0.92080164 0.8604658 prediction 0.573567413613238 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98249015 chr7:98249017 nonsynonymous SNV 0.973 2 23 hm5C_associated_SNPs_56713 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:98249006-98249054
64251 chr7 108212225 108212225 1 + G T COAD 108212223 + 108212203 108212243 41 AATCTGCATTTTAATGATAACAGAATTAATTCTGGCCTCAA AATCTGCATTTTAATGATAACATAATTAATTCTGGCCTCAA < 41bp 0.786749475612821 0.48626047678762 0.5659429 0.14297244 prediction 0.573498951225642 Functional Loss - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108212223 chr7:108212225 stopgain 1.000 1 23 hm5C_associated_SNPs_56719 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:108212225-108212247
64251 chr19 44680995 44680995 1 + G T LUSC 44680992 + 44680972 44681012 41 AGTTCATCTAGTGGTCCACACAGGAGAGAAACCCTATAAAT AGTTCATCTAGTGGTCCACACAGTAGAGAAACCCTATAAAT < 41bp 0.88782676091994 0.601077974429315 0.38907087 0.02149415 prediction 0.57349757298125 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680992 chr19:44680995 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_56720 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44680981-44681019
64251 chr5 6742698 6742698 1 + G T READ 6742695 + 6742675 6742715 41 GTCCGGGCAGCGGAGTTCATCAAGAATTACATGAAGGTACT GTCCGGGCAGCGGAGTTCATCAATAATTACATGAAGGTACT < 41bp 0.892781500101731 0.606045382487938 0.7579943 0.25422603 prediction 0.573472235227585 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6742695 chr5:6742698 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_56723 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:6742675-6742698
64251 chr12 69991044 69991044 1 + G T THCA 69991041 + 69991021 69991061 41 AGACAAACTCATTCACTTTTCTGGGGTTGCCCTTGGTGAGT AGACAAACTCATTCACTTTTCTGTGGTTGCCCTTGGTGAGT < 41bp 0.786702550456215 0.406753879160845 0.40697196 0.06259963 prediction 0.57340510091243 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69991041 chr12:69991044 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56726 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69990943-69991048
64251 chr3 128621446 128621446 1 + G T rs549000613 128621443 + 128621423 128621463 41 CGGTTCAGCATGGGCAGCGTCGTGGCTGGGCTGCTCAAGAG CGGTTCAGCATGGGCAGCGTCGTTGCTGGGCTGCTCAAGAG < 41bp 0.786637734575419 0.392866358100596 0.39452243 0.10069239 prediction 0.573275469150837 Functional Loss - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128621443 chr3:128621446 synonymous SNV . 0 24 hm5C_associated_SNPs_56727 1 0 5 BUD13 POSTAR2 ENCODE chr3:128621433-128621468
64251 chr7 105189035 105189035 1 + G T PAAD 105189033 + 105189013 105189053 41 TACTGAGCCAAAGCAACTCCCAGAAAAATACTCTCTTCCTG TACTGAGCCAAAGCAACTCCCATAAAAATACTCTCTTCCTG < 41bp 0.786631436875601 0.45652188920732 0.20531183 0.18275866 prediction 0.573262873751203 Functional Loss - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105189033 chr7:105189035 stopgain 1.000 0 23 hm5C_associated_SNPs_56728 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:105188994-105189035
64251 chr8 11640745 11640745 1 + G T LUSC 11640743 + 11640723 11640763 41 ACTTTGGTGGTGGTGGCTTCCTGGCATTTTATAATTGTCAG ACTTTGGTGGTGGTGGCTTCCTTGCATTTTATAATTGTCAG < 41bp 0.786619168758078 0.458248876470477 0.05663967 0.052158654 prediction 0.573238337516156 Functional Loss - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640743 chr8:11640745 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_56730 0 0 1 BUD13 POSTAR2 ENCODE chr8:11640630-11640746
64251 chr1 32936203 32936203 1 + G T LIHC 32936200 + 32936180 32936220 41 GGCAGAGATACAGGTTTGCTCTGGAGCAGCAGCAGCTGGCG GGCAGAGATACAGGTTTGCTCTGTAGCAGCAGCAGCTGGCG < 41bp 0.786609035980821 0.491019087592134 0.646988 0.3103432 prediction 0.573218071961642 Functional Loss - ZBTB8B ENSG00000254553;ENSG00000273274 UTR5 Human other chr1:32936200 chr1:32936203 . . 0 24 hm5C_associated_SNPs_56731 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:32936203-32936204
64251 chr14 89336457 89336457 1 + G T UCEC 89336454 + 89336434 89336474 41 ATTACAAAGAAGTTTTGAAACAAGACAATACTCATGTGGAA ATTACAAAGAAGTTTTGAAACAATACAATACTCATGTGGAA < 41bp 0.786570788880758 0.429772313616145 0.7589979 0.44594574 prediction 0.573141577761517 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89336454 chr14:89336457 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_56736 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr14:89336430-89336460
64251 chr6 3019823 3019823 1 + G T UCEC 3019820 + 3019800 3019840 41 GGGATGGTGGCTGCGTGGTCCCAGAGGCTGCAGACCATCTG GGGATGGTGGCTGCGTGGTCCCATAGGCTGCAGACCATCTG < 41bp 0.786553192928101 0.413420983398707 0.8345646 0.16056156 prediction 0.573106385856202 Functional Loss - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3019820 chr6:3019823 nonsynonymous SNV 0.887 1 24 hm5C_associated_SNPs_56738 0 0 3 RBM15 POSTAR2 ENCODE chr6:3019727-3019893
64251 chr1 23697681 23697681 1 + G T SARC 23697679 + 23697659 23697699 41 CCAGGACGACTCCCCGGGCTCAGCTTGGCTGCCTGCCTCCT CCAGGACGACTCCCCGGGCTCATCTTGGCTGCCTGCCTCCT < 41bp 0.798237009818382 0.51169886711362 0.2365107 0.06839162 prediction 0.573076285409523 Functional Loss - ZNF436-AS1 ENSG00000249087 CDS Human antisense chr1:23697679 chr1:23697681 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_56744 0 0 2 U2AF2 POSTAR2 ENCODE chr1:23697619-23697682
64251 chr15 67073392 67073392 1 + G T BLCA 67073390 + 67073370 67073410 41 CACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACGCGCGT CACTGGTGCAGCGTGGCGTACTTGGAGCACCGGACGCGCGT < 41bp 0.844413273082067 0.557875522426324 0.59302866 0.32525796 prediction 0.573075501311487 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073390 chr15:67073392 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_56745 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:67073387-67073411
64251 chr19 39961065 39961065 1 + G T UCEC 39961063 + 39961043 39961083 41 GCTCTGCTCAGAGACAGCATCAGGTGTGGATGTTGGGGGCC GCTCTGCTCAGAGACAGCATCATGTGTGGATGTTGGGGGCC < 41bp 0.854199529431198 0.567666832694263 0.9284229 0.35064268 prediction 0.573065393473869 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39961063 chr19:39961065 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_56746 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr19:39961057-39961089
64251 chr15 45007818 45007818 1 + G T LUAD 45007816 + 45007796 45007836 41 TTTCTATCTCTTGTACTACACTGAATTCACCCCCACTGAAA TTTCTATCTCTTGTACTACACTTAATTCACCCCCACTGAAA < 41bp 0.820698933104911 0.53420606483073 0.14434806 0.0966005 prediction 0.572985736548362 Functional Loss - B2M ENSG00000166710 CDS Human protein_coding chr15:45007816 chr15:45007818 stopgain 0.011 0 23 hm5C_associated_SNPs_56750 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr15:45007800-45007820
64251 chr2 105706392 105706392 1 + G T SARC 105706390 + 105706370 105706410 41 TTTAACAGAGACGTGATTGGCAGCAGATGGCTGATTAAGGA TTTAACAGAGACGTGATTGGCATCAGATGGCTGATTAAGGA < 41bp 0.813289279913538 0.526812233485805 0.4374953 0.12643445 prediction 0.572954092855465 Functional Loss - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105706390 chr2:105706392 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_56752 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:105706375-105706416
64251 chr18 12971249 12971249 1 + A T STAD 12971245 + 12971225 12971265 41 ATTTTTGAATATAATGAAAACACCAGGTCAGTCCTGCTTTG ATTTTTGAATATAATGAAAACACCTGGTCAGTCCTGCTTTG < 41bp 0.786472058856679 0.472789354917888 0.101816535 0.08875629 prediction 0.572944117713359 Functional Loss - SEH1L ENSG00000085415 CDS Human protein_coding chr18:12971245 chr18:12971249 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_56753 0 0 3 KHSRP POSTAR2 ENCODE chr18:12971242-12971314
64251 chr1 898496 898496 1 + G T LUAD 898493 + 898473 898513 41 CACCTGCCCTCCCCAGGCGGCGGGAGCCTGTTTGCCATCCA CACCTGCCCTCCCCAGGCGGCGGTAGCCTGTTTGCCATCCA < 41bp 0.786449177062016 0.410672881798054 0.86898965 0.4244627 prediction 0.572898354124032 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898493 chr1:898496 synonymous SNV . 0 24 hm5C_associated_SNPs_56755 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:898454-898502
64251 chrX 21887675 21887675 1 + G T UCEC 21887673 + 21887653 21887693 41 GAGACCTTGTCACCCATCTACAGGATTGTCCTGTTACTAAT GAGACCTTGTCACCCATCTACATGATTGTCCTGTTACTAAT < 41bp 0.848908642799455 0.562463292569454 0.29298204 0.103063226 prediction 0.572890700460002 Functional Loss - MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21887673 chrX:21887675 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_56756 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:21887661-21887680
64251 chr6 21595158 21595158 1 + G T BLCA 21595155 + 21595135 21595175 41 CCCGACTACAAGTACCGGCCCAGGAAGAAGGTGAAGTCCGG CCCGACTACAAGTACCGGCCCAGTAAGAAGGTGAAGTCCGG < 41bp 0.786444560347992 0.447276392584893 0.659207 0.8461672 prediction 0.572889120695983 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21595155 chr6:21595158 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_56757 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:21595117-21595167
64251 chr6 21595157 21595157 1 + G T LGG 21595155 + 21595135 21595175 41 CCCGACTACAAGTACCGGCCCAGGAAGAAGGTGAAGTCCGG CCCGACTACAAGTACCGGCCCATGAAGAAGGTGAAGTCCGG < 41bp 0.786444560347992 0.490167781293481 0.659207 0.21871552 prediction 0.572889120695983 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21595155 chr6:21595157 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_56758 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:21595117-21595167
64251 chr17 30520205 30520205 1 + G T UCEC 30520202 + 30520182 30520222 41 CCTCAAGCTCTGGAGGATGTCAAGAATGTAGTCAGAAAACA CCTCAAGCTCTGGAGGATGTCAATAATGTAGTCAGAAAACA < 41bp 0.875923806863229 0.589492514325444 0.18433002 0.104031384 prediction 0.57286258507557 Functional Loss - RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30520202 chr17:30520205 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56760 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30520164-30520237
64251 chr13 113803399 113803399 1 + G T STAD 113803396 + 113803376 113803416 41 GTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCCGAGTC GTGGCGCCTGCCTGCCTCCCCGATCGTGACTGGGCCGAGTC < 41bp 0.786397360492934 0.389669922773073 0.88516015 0.29155397 prediction 0.572794720985867 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803396 chr13:113803399 nonsynonymous SNV 0.546 1 24 hm5C_associated_SNPs_56768 0 0 3 RPS3 POSTAR2 ENCODE chr13:113803360-113803415
64251 chr10 102738865 102738865 1 - C A COAD 102738867 - 102738847 102738887 41 TGCAGGATCTTCTTCCCTCCCAGGTCTCCCTGGGGAGGTAG TGCAGGATCTTCTTCCCTCCCATGTCTCCCTGGGGAGGTAG < 41bp 0.851519021949153 0.565127802768973 0.39245898 0.038036913 prediction 0.57278243836036 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738867 chr10:102738865 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_56770 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:102738864-102738898
64251 chr9 110092359 110092359 1 + G T rs553311979 110092356 + 110092336 110092376 41 GTCTCTGTTTCATGGCAACACTGGATAATGGCTTTGTGAAA GTCTCTGTTTCATGGCAACACTGTATAATGGCTTTGTGAAA < 41bp 0.786390434357458 0.436352130046061 0.12335521 0.026199728 prediction 0.572780868714916 Functional Loss - RAD23B ENSG00000119318 UTR3 Human protein_coding chr9:110092356 chr9:110092359 . . 0 24 hm5C_associated_SNPs_56771 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr9:110092301-110092373
64251 chr10 21962689 21962689 1 + G T LUAD 21962686 + 21962666 21962706 41 GACCCAAAGGAAACAAAAATCAAGAGAATGTTTCTCATCTC GACCCAAAGGAAACAAAAATCAATAGAATGTTTCTCATCTC < 41bp 0.851551642320927 0.565198117276597 0.8366364 0.3864255 prediction 0.57270705008866 Functional Loss - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:21962686 chr10:21962689 stopgain 1.000 1 24 hm5C_associated_SNPs_56776 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:21962686-21962712
64251 chr18 72998986 72998986 1 + G T LUAD 72998983 + 72998963 72999003 41 CGTACCTGCGTGAGGAGGACCTGGACGACAGCCCCAAGGGA CGTACCTGCGTGAGGAGGACCTGTACGACAGCCCCAAGGGA < 41bp 0.786342904330739 0.398620389319371 0.48361441 0.19950008 prediction 0.572685808661479 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998983 chr18:72998986 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_56777 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr18:72998951-72998989
64251 chr12 69096532 69096532 1 + G T COAD 69096530 + 69096510 69096550 41 CCCCAGAGACAGAATACAGTCTGCATTAGAAGAGGAAAGTG CCCCAGAGACAGAATACAGTCTTCATTAGAAGAGGAAAGTG < 41bp 0.800825083182752 0.514484588707475 0.09813759 0.12630108 prediction 0.572680988950554 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69096530 chr12:69096532 nonsynonymous SNV 0.966 0 23 hm5C_associated_SNPs_56778 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69096526-69096551
64251 chr6 170639606 170639606 1 + A T PRAD 170639602 + 170639582 170639622 41 CTGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTG CTGGGAACCCACTGAGGCACCCGGTCCTCGTCAGGCCGCTG < 41bp 0.786328849772675 0.471130740584652 0.18987632 0.10427943 prediction 0.572657699545351 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170639602 chr6:170639606 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_56779 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:170639587-170639623
64251 chr6 170639605 170639605 1 + G T PRAD 170639602 + 170639582 170639622 41 CTGGGAACCCACTGAGGCACCCGGACCTCGTCAGGCCGCTG CTGGGAACCCACTGAGGCACCCGTACCTCGTCAGGCCGCTG < 41bp 0.786328849772675 0.396031925502821 0.18987632 0.060321122 prediction 0.572657699545351 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170639602 chr6:170639605 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_56780 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:170639587-170639623
64251 chr18 60206986 60206986 1 + G T SARC 60206983 + 60206963 60207003 41 TAGAGCAAGCTCCAATACCTCAGGACGGACTTACCGTGGCA TAGAGCAAGCTCCAATACCTCAGTACGGACTTACCGTGGCA < 41bp 0.786282991025287 0.409823697785179 0.90395284 0.2537163 prediction 0.572565982050575 Functional Loss - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60206983 chr18:60206986 nonsynonymous SNV 0.973 3 24 hm5C_associated_SNPs_56792 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:60206967-60206989
64251 chr17 38487504 38487504 1 + G T HNSC 38487502 + 38487482 38487522 41 CAGCAGCTCCTGCCCGACACCTGGGGGCGGGCACCTCAATG CAGCAGCTCCTGCCCGACACCTTGGGGCGGGCACCTCAATG < 41bp 0.840142374923924 0.553890281228994 0.8429884 0.16163638 prediction 0.572504187389859 Functional Loss - RARA ENSG00000131759 CDS Human protein_coding chr17:38487502 chr17:38487504 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_56796 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38487501-38487539
64251 chr19 55855188 55855188 1 + G C COAD 55855184 + 55855164 55855204 41 AGCGGAGTGCTCAGCTGTGGCTGGGCCCAGCCGCCTTCATC AGCGGAGTGCTCAGCTGTGGCTGGCCCCAGCCGCCTTCATC < 41bp 0.789282524384523 0.503037740890585 0.23272726 0.07656145 prediction 0.572489566987876 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55855184 chr19:55855188 nonsynonymous SNV 0.170 3 25 hm5C_associated_SNPs_56798 0 0 4 BUD13 POSTAR2 ENCODE chr19:55855157-55855212
64251 chr2 74684835 74684835 1 + G C BRCA 74684834 + 74684814 74684854 41 GCGGCCATCCCCCTCAGGCCCGCCGCCGCGCTGCTCTGTCC GCGGCCATCCCCCTCAGGCCCCCCGCCGCGCTGCTCTGTCC < 41bp 0.791808924942318 0.505584070711203 0.19976923 0.031790048 prediction 0.57244970846223 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74684834 chr2:74684835 synonymous SNV . 0 22 hm5C_associated_SNPs_56800 0 0 2 HNRNPK POSTAR2 ENCODE chr2:74684747-74684873
64251 chr1 905680 905680 1 + G T SARC 905678 + 905658 905698 41 ACATCCTGGACCTGGAGAACCAGCGAGAAAACCTGGAGCAG ACATCCTGGACCTGGAGAACCATCGAGAAAACCTGGAGCAG < 41bp 0.786224086152547 0.452644561186942 0.8979327 0.15070987 prediction 0.572448172305093 Functional Loss - PLEKHN1 ENSG00000187583 CDS Human protein_coding chr1:905678 chr1:905680 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_56801 0 0 1 PPIG POSTAR2 ENCODE chr1:905669-905777
64251 chr10 3161061 3161061 1 + G T UCEC 3161058 + 3161038 3161078 41 CTGCTGATCATCGGTGGATTCGAGGTACGTTACCGTTTCTC CTGCTGATCATCGGTGGATTCGATGTACGTTACCGTTTCTC < 41bp 0.78621664739202 0.411375095833989 0.903201 0.38690135 prediction 0.572433294784039 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3161058 chr10:3161061 nonsynonymous SNV 0.110 4 24 hm5C_associated_SNPs_56804 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr10:3161053-3161074
64251 chr1 89889975 89889975 1 + G T OV 89889972 + 89889952 89889992 41 AGAGCGACAGGGTCCAGTTGCTGGAAGAGCAAGAGAGGACC AGAGCGACAGGGTCCAGTTGCTGTAAGAGCAAGAGAGGACC < 41bp 0.848386412257295 0.562210684783885 0.53898984 0.32321906 prediction 0.572351454946821 Functional Loss - GBP1P1 ENSG00000225492 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:89889972 chr1:89889975 . . 0 24 hm5C_associated_SNPs_56811 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:89889951-89889984
64251 chr14 39716613 39716613 1 + G T STAD 39716610 + 39716590 39716630 41 AGCCTCAAACAGAACATCAGCAAGAATCTGAATCAGAAATT AGCCTCAAACAGAACATCAGCAATAATCTGAATCAGAAATT < 41bp 0.786156647139298 0.424310291528082 0.15588334 0.046358943 prediction 0.572313294278596 Functional Loss - MIA2 ENSG00000150526;ENSG00000258941 CDS Human other chr14:39716610 chr14:39716613 stopgain 0.500 0 24 hm5C_associated_SNPs_56814 0 0 3 FASTKD2 POSTAR2 ENCODE chr14:39716567-39716640
64251 chr7 87505653 87505653 1 - C A rs6952943 87505656 - 87505636 87505676 41 CGTCCTTCTCGCGCCTCGCTCTGGCCCTGCAGGTTGTGTTT CGTCCTTCTCGCGCCTCGCTCTGTCCCTGCAGGTTGTGTTT < 41bp 0.786156141251568 0.417711668790376 0.90601885 0.28192982 prediction 0.572312282503135 Functional Loss - DBF4;SLC25A40 ENSG00000006634;ENSG00000075303 UTR5 Human other chr7:87505656 chr7:87505653 . . 0 24 hm5C_associated_SNPs_56815 0 0 1 IGF2BP2 POSTAR2 ENCODE chr7:87505493-87505657
64251 chr3 12610439 12610439 1 + G T COAD 12610437 + 12610417 12610457 41 TTCTCACATGACTTGGCAAACAGCAAACCGTCCACCATCTG TTCTCACATGACTTGGCAAACATCAAACCGTCCACCATCTG < 41bp 0.843875911186165 0.557732719902901 0.16409475 0.098587334 prediction 0.572286382566528 Functional Loss - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12610437 chr3:12610439 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56818 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:12610382-12610461
64251 chr16 70507028 70507028 1 + G C HNSC 70507027 + 70507007 70507047 41 GACCACCAGGAGGATGGGGGCGAGGCCCTGCGAGCCTGGCG GACCACCAGGAGGATGGGGGCCAGGCCCTGCGAGCCTGGCG < 41bp 0.81651041194262 0.530367923241191 0.8845087 0.5592795 prediction 0.572284977402859 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70507027 chr16:70507028 nonsynonymous SNV 0.107 0 22 hm5C_associated_SNPs_56819 0 0 4 BUD13 POSTAR2 ENCODE chr16:70507000-70507052
64251 chr6 26431349 26431349 1 + G T LUSC 26431346 + 26431326 26431366 41 TTTGCCAGGTGGGCATCTTCCTGGACTATGAAGCTGGAGAC TTTGCCAGGTGGGCATCTTCCTGTACTATGAAGCTGGAGAC < 41bp 0.865355319813522 0.579216779498154 0.3416456 0.25895393 prediction 0.572277080630737 Functional Loss - BTN2A3P ENSG00000124549 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:26431346 chr6:26431349 . . 0 24 hm5C_associated_SNPs_56820 0 0 1 SF3B1 POSTAR2 ENCODE chr6:26431326-26431355
64251 chr3 44879865 44879865 1 + G T ESCA 44879863 + 44879843 44879883 41 CGGGGCTGCTGCAGTCTGCCCAGGAAGAACTGACCAAGAAG CGGGGCTGCTGCAGTCTGCCCATGAAGAACTGACCAAGAAG < 41bp 0.807823238500124 0.521690143683156 0.8447985 0.14195842 prediction 0.572266189633937 Functional Loss - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44879863 chr3:44879865 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_56821 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:44879833-44879880
64251 chr1 114516288 114516288 1 + G T rs138392484 114516286 + 114516266 114516306 41 CTGAAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTG CTGAAGCAGAAGGTTTTTCTCTTGGGGAACCTGTCTCAGTG < 41bp 0.846696624911899 0.560570808215507 0.9397058 0.8934196 prediction 0.572251633392784 Functional Loss - HIPK1 ENSG00000163349 UTR3 Human protein_coding chr1:114516286 chr1:114516288 . . 0 23 hm5C_associated_SNPs_56823 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:114516247-114516310
64251 chr16 3109748 3109748 1 + G T rs77078682 3109745 + 3109725 3109765 41 CACTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCCCAG CACTGGTGGGGACCTGGGACCCATACCCGGAACCAGCCCAG < 41bp 0.786112670828164 0.416031974283089 0.207659 0.058403134 prediction 0.572225341656328 Functional Loss - MMP25 ENSG00000008516 UTR3 Human protein_coding chr16:3109745 chr16:3109748 . . 0 24 hm5C_associated_SNPs_56825 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:3109711-3109748
64251 chr7 7613308 7613308 1 + G T UCEC 7613305 + 7613285 7613325 41 GATGCGTCTTCGGGCTTTATCAAGGTATGGACTTGATACAG GATGCGTCTTCGGGCTTTATCAATGTATGGACTTGATACAG < 41bp 0.888185864337428 0.602097602638621 0.9467795 0.40151897 prediction 0.572176523397614 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7613305 chr7:7613308 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_56829 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:7613289-7613314
64251 chr11 67052428 67052428 1 + G T LUAD 67052425 + 67052405 67052445 41 TCTACCTGTTCCCCAACCGCCTCGAGTGGCGGGGCGAGGGC TCTACCTGTTCCCCAACCGCCTCTAGTGGCGGGGCGAGGGC < 41bp 0.883988928809085 0.597905059983186 0.7115309 0.8811324 prediction 0.5721677376518 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052425 chr11:67052428 stopgain 0.829 0 24 hm5C_associated_SNPs_56830 0 0 4 DDX24 POSTAR2 ENCODE chr11:67052419-67052453
64251 chr7 44801092 44801092 1 + G T LUAD 44801089 + 44801069 44801109 41 TGCGGCTGACCTTCCCTGTGCGCGATGGGGTGGTCCTGGAG TGCGGCTGACCTTCCCTGTGCGCTATGGGGTGGTCCTGGAG < 41bp 0.786076819332844 0.393307915234885 0.34288216 0.18654773 prediction 0.572153638665688 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44801089 chr7:44801092 nonsynonymous SNV 0.960 4 24 hm5C_associated_SNPs_56832 0 0 6 DDX24 POSTAR2 ENCODE chr7:44801047-44801117
64251 chrX 102004018 102004018 1 + G T LUAD 102004015 + 102003995 102004035 41 TGGAGCAGAGAGGGAGGCTACTGGTGTTGTTAGGCCTGTAG TGGAGCAGAGAGGGAGGCTACTGTTGTTGTTAGGCCTGTAG < 41bp 0.786069533880231 0.423173346591959 0.29735512 0.19102135 prediction 0.572139067760462 Functional Loss - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102004015 chrX:102004018 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_56835 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:102003997-102004018
64251 chrX 46434207 46434207 1 + A C ESCA 46434203 + 46434183 46434223 41 GTGGTGCAGCTTTTCCGCGACCCGAGGGCGGTGCACAACTC GTGGTGCAGCTTTTCCGCGACCCGCGGGCGGTGCACAACTC < 41bp 0.786068812282913 0.394272033534943 0.3707641 0.22458515 prediction 0.572137624565825 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46434203 chrX:46434207 synonymous SNV . 0 25 hm5C_associated_SNPs_56836 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chrX:46434191-46434215
64251 chr11 65687838 65687838 1 + G T LUAD 65687836 + 65687816 65687856 41 AGCAGTGCATCGAGCTGGAGCAGCAGTTTGACTTCTTGAAG AGCAGTGCATCGAGCTGGAGCATCAGTTTGACTTCTTGAAG < 41bp 0.786064349143167 0.461734842590407 0.4382348 0.20882678 prediction 0.572128698286334 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65687836 chr11:65687838 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_56837 0 0 2 LARP4 POSTAR2 ENCODE chr11:65687832-65687889
64251 chr12 69109430 69109430 1 + G T UCEC 69109428 + 69109408 69109448 41 ACCCTGATGCTCCCATAAGACAGAAAATGCCCCTTGATGAT ACCCTGATGCTCCCATAAGACATAAAATGCCCCTTGATGAT < 41bp 0.786027738532513 0.468831197812081 0.02910012 0.009833425 prediction 0.572055477065025 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69109428 chr12:69109430 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_56840 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69109412-69109450
64251 chr2 131976082 131976082 1 + G T PAAD 131976080 + 131976060 131976100 41 TGCCGTTGCTTCCCCTGCTACAGGGAGAGCGGCAAGAGCAA TGCCGTTGCTTCCCCTGCTACATGGAGAGCGGCAAGAGCAA < 41bp 0.786024156748173 0.452534390623864 0.77559495 0.5993706 prediction 0.572048313496347 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976080 chr2:131976082 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_56843 0 0 7 DDX24 POSTAR2 ENCODE chr2:131976061-131976105
64251 chr1 154227733 154227733 1 + A C LUSC 154227729 + 154227709 154227749 41 CCTTACTGACGACAACCAATCAGCATTCATCCTCCTTGGGT CCTTACTGACGACAACCAATCAGCCTTCATCCTCCTTGGGT < 41bp 0.785987408254619 0.388126283784794 0.64128596 0.25421643 prediction 0.571974816509239 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154227729 chr1:154227733 nonsynonymous SNV 0.985 3 25 hm5C_associated_SNPs_56846 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:154227647-154227751
64251 chr9 132395042 132395042 1 + G T UCEC 132395039 + 132395019 132395059 41 TATTCCAAGGCCAAGACCTACTGGAAACAAATCCCACCCAC TATTCCAAGGCCAAGACCTACTGTAAACAAATCCCACCCAC < 41bp 0.884699183220465 0.59871723147269 0.5249617 0.12633738 prediction 0.571963903495551 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132395039 chr9:132395042 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_56847 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:132395033-132395060
64251 chr6 27100994 27100994 1 + G T HNSC 27100991 + 27100971 27101011 41 GCCGAGCGGGTCGGGGCCGGCGCGCCGGTGTATCTGGCAGC GCCGAGCGGGTCGGGGCCGGCGCTCCGGTGTATCTGGCAGC < 41bp 0.886833718449397 0.600863788720288 0.4538799 0.3342053 prediction 0.571939859458216 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100991 chr6:27100994 synonymous SNV . 0 24 hm5C_associated_SNPs_56848 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr12 54394247 54394247 1 + A T LUAD 54394243 + 54394223 54394263 41 CCCACCTCGGCGCCGACACGCGCTACATGCGGACTTGGCTC CCCACCTCGGCGCCGACACGCGCTTCATGCGGACTTGGCTC < 41bp 0.785963811010341 0.474348741525886 0.28389212 0.13738734 prediction 0.571927622020681 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394243 chr12:54394247 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_56849 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:54394240-54394260
64251 chr8 38810885 38810885 1 + G T LUAD 38810882 + 38810862 38810902 41 CCATGAATGTCTGGTCAAGTCTGGGTAATTGTGTCTGCTTT CCATGAATGTCTGGTCAAGTCTGTGTAATTGTGTCTGCTTT < 41bp 0.785949811476835 0.410121649101079 0.3428321 0.091204375 prediction 0.571899622953669 Functional Loss - PLEKHA2 ENSG00000169499 CDS Human protein_coding chr8:38810882 chr8:38810885 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_56851 0 0 4 CSTF2 POSTAR2 GSE37401,GSM917676 chr8:38810880-38810900
64251 chr10 12238281 12238281 1 + G C LGG 12238280 + 12238260 12238300 41 GTGCTTCACTGCCAGTTCTCCGCGTGGTACCCGTTCTTCCG GTGCTTCACTGCCAGTTCTCCCCGTGGTACCCGTTCTTCCG < 41bp 0.789804024408177 0.503876369794741 0.86566824 0.7538872 prediction 0.571855309226872 Functional Loss - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12238280 chr10:12238281 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_56857 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:12238274-12238297
64251 chr18 12014356 12014356 1 + G T LUSC 12014354 + 12014334 12014374 41 TCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGGT TCTGCAATGGCCAGCGGCTCCGTGTCTCCGGGGAGACAGGT < 41bp 0.785926870485228 0.441338060137212 0.90569675 0.2294586 prediction 0.571853740970455 Functional Loss - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12014354 chr18:12014356 synonymous SNV . 0 23 hm5C_associated_SNPs_56858 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr18:12014339-12014368
64251 chr16 1748969 1748969 1 + G T HNSC 1748967 + 1748947 1748987 41 ACAACAAGGTCCTGAACCCACCGGGAGGCAAATCCAGCATC ACAACAAGGTCCTGAACCCACCTGGAGGCAAATCCAGCATC < 41bp 0.848757612547051 0.562895126903561 0.8898432 0.4179616 prediction 0.57172497128698 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748967 chr16:1748969 synonymous SNV . 0 23 hm5C_associated_SNPs_56865 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:1748941-1748983
64251 chr17 68129135 68129135 1 + G T UCEC 68129132 + 68129112 68129152 41 CTAGAAGCTCCTATGTTCCCCGAGAAATTCTCTGGGGCCAT CTAGAAGCTCCTATGTTCCCCGATAAATTCTCTGGGGCCAT < 41bp 0.785862370362632 0.405897100819666 0.77286214 0.34821862 prediction 0.571724740725264 Functional Loss - KCNJ16 ENSG00000153822 CDS Human protein_coding chr17:68129132 chr17:68129135 stopgain 0.943 1 24 hm5C_associated_SNPs_56866 0 0 1 HNRNPC POSTAR2 SRX1438577 chr17:68129120-68129140
64251 chr1 2489885 2489885 1 + G T BLCA 2489883 + 2489863 2489903 41 TCAATGGCCTAAGCAAGTGTCTGCAGTGCCAAATGTGTGAC TCAATGGCCTAAGCAAGTGTCTTCAGTGCCAAATGTGTGAC < 41bp 0.785858219925131 0.490355213080872 0.28263444 0.11539978 prediction 0.571716439850261 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2489883 chr1:2489885 synonymous SNV . 0 23 hm5C_associated_SNPs_56868 0 0 2 PPIG POSTAR2 ENCODE chr1:2489861-2489911
64251 chr16 5127960 5127960 1 + G T rs145158686 5127957 + 5127937 5127977 41 CTTTCTTTAAAGAGACACCTCTGGACCTGCAGCACCGGCTC CTTTCTTTAAAGAGACACCTCTGTACCTGCAGCACCGGCTC < 41bp 0.90540435868088 0.619558141356916 0.7371426 0.3226717 prediction 0.571692434647927 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127957 chr16:5127960 nonsynonymous SNV 0.271 1 24 hm5C_associated_SNPs_56869 1 0 3 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr7 56049250 56049250 1 + G T LUAD 56049248 + 56049228 56049268 41 GGAACACGTGGTATGGCGAGCAGGACCAAGCTGGTAGGAAG GGAACACGTGGTATGGCGAGCATGACCAAGCTGGTAGGAAG < 41bp 0.785826257674937 0.471557637635094 0.8252965 0.43062514 prediction 0.571652515349873 Functional Loss - NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56049248 chr7:56049250 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_56874 0 0 2 IGF2BP1 POSTAR2 ENCODE chr7:56049165-56049254
64251 chrX 153248120 153248120 1 + G T UCEC 153248117 + 153248097 153248137 41 CTTTGGGGGTGCTCTCTTGCCTGGGCTTTGTGGTCCTCAAG CTTTGGGGGTGCTCTCTTGCCTGTGCTTTGTGGTCCTCAAG < 41bp 0.897131561359881 0.611335787206036 0.5688939 0.1353473 prediction 0.571591548307691 Functional Loss - TMEM187 ENSG00000177854 CDS Human protein_coding chrX:153248117 chrX:153248120 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_56879 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153248067-153248135
64251 chr1 28887893 28887893 1 + G T CESC 28887890 + 28887870 28887910 41 AAACTGAACTATGCCACTTACGGGAAACAACCAGATAACAG AAACTGAACTATGCCACTTACGGTAAACAACCAGATAACAG < 41bp 0.879469757737492 0.593678962487561 0.5555345 0.09298545 prediction 0.571581590499863 Functional Loss - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28887890 chr1:28887893 synonymous SNV . 0 24 hm5C_associated_SNPs_56880 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:28887866-28887895
64251 chr2 238536350 238536350 1 + G C rs539618279 238536349 + 238536329 238536369 41 CAACCGGGAGCGGCTCACGGCGGAGGACGACGCGCTCAACC CAACCGGGAGCGGCTCACGGCCGAGGACGACGCGCTCAACC < 41bp 0.788310817792876 0.502536442188313 0.5786424 0.10766539 prediction 0.571548751209125 Functional Loss - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238536349 chr2:238536350 synonymous SNV . 0 22 hm5C_associated_SNPs_56882 0 0 1 BUD13 POSTAR2 ENCODE chr2:238536286-238536373
64251 chr19 50435887 50435887 1 + A C rs574723684 50435883 + 50435863 50435903 41 CCTCCCACCACCCTCCCCGCCGCCACTACCACCACCACCAC CCTCCCACCACCCTCCCCGCCGCCCCTACCACCACCACCAC < 41bp 0.785768646995011 0.368572884507871 0.1749238 0.24140465 prediction 0.571537293990022 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50435883 chr19:50435887 synonymous SNV . 0 25 hm5C_associated_SNPs_56883 0 0 1 HNRNPK POSTAR2 ENCODE chr19:50435878-50435972
64251 chr16 1547465 1547465 1 + G T LUAD 1547463 + 1547443 1547483 41 TGGTGGAGCAAGTGCCGGACCGGGCCATGGAGGCTGTGCTG TGGTGGAGCAAGTGCCGGACCGTGCCATGGAGGCTGTGCTG < 41bp 0.785727797517476 0.448778264769042 0.864181 0.20745 prediction 0.571455595034953 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1547463 chr16:1547465 synonymous SNV . 0 23 hm5C_associated_SNPs_56890 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:1547454-1547478
64251 chr2 110373178 110373178 1 + G T LUAD 110373176 + 110373156 110373196 41 TACGACGCCGATGTGGACATCAGGGACTACAGTGGGAAAAA TACGACGCCGATGTGGACATCATGGACTACAGTGGGAAAAA < 41bp 0.853758446503372 0.56803191998647 0.92306757 0.7233909 prediction 0.571453053033805 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373176 chr2:110373178 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_56892 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:110373162-110373205
64251 chr6 18399888 18399888 1 + G T SARC 18399885 + 18399865 18399905 41 CTGTGTGAGCAGTCTCTGGACAAGATGACCACACTCCAGGA CTGTGTGAGCAGTCTCTGGACAATATGACCACACTCCAGGA < 41bp 0.89160132340056 0.605884759486948 0.10795787 0.032046854 prediction 0.571433127827225 Functional Loss - RNF144B ENSG00000137393 CDS Human protein_coding chr6:18399885 chr6:18399888 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_56893 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:18399875-18399890
64251 chr14 57752976 57752976 1 + A C UCEC 57752972 + 57752952 57752992 41 GATCTTAGATTACACACTTACTGGATGTTATGCAGATCAGC GATCTTAGATTACACACTTACTGGCTGTTATGCAGATCAGC < 41bp 0.785711992471226 0.390192576047295 0.33885 0.15484169 prediction 0.571423984942451 Functional Loss - AP5M1 ENSG00000053770 CDS Human protein_coding chr14:57752972 chr14:57752976 synonymous SNV . 0 25 hm5C_associated_SNPs_56894 0 0 2 U2AF2 POSTAR2 ENCODE chr14:57752921-57753028
64251 chr20 31022350 31022350 1 + G T COAD 31022348 + 31022328 31022368 41 TGCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACATTAA TGCCGGGGTTGGACTGGCGCCATGACCCTCGCAGACATTAA < 41bp 0.78570167557072 0.461965577879449 0.6397573 0.09775904 prediction 0.57140335114144 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022348 chr20:31022350 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_56897 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:31022321-31022370
64251 chr20 31022351 31022351 1 + G T UCEC 31022348 + 31022328 31022368 41 TGCCGGGGTTGGACTGGCGCCAGGACCCTCGCAGACATTAA TGCCGGGGTTGGACTGGCGCCAGTACCCTCGCAGACATTAA < 41bp 0.78570167557072 0.414672566614653 0.6397573 0.12429157 prediction 0.57140335114144 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022348 chr20:31022351 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56898 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:31022321-31022370
64251 chr1 40758182 40758182 1 + G T UCEC 40758179 + 40758159 40758199 41 TTTCAAGCTGATGCATTTGCCAAGAAACTTGGGAAGGCTAA TTTCAAGCTGATGCATTTGCCAATAAACTTGGGAAGGCTAA < 41bp 0.785682392541842 0.453264431099847 0.5636852 0.24335593 prediction 0.571364785083684 Functional Loss - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40758179 chr1:40758182 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_56901 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:40758174-40758228
64251 chr22 18022469 18022469 1 + G T HNSC 18022466 + 18022446 18022486 41 GGGGTGCAGGGAGGGGACTCCATGATGGACAGCCCAGAGAT GGGGTGCAGGGAGGGGACTCCATTATGGACAGCCCAGAGAT < 41bp 0.785665454104598 0.399953383475632 0.4221318 0.28023937 prediction 0.571330908209195 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18022466 chr22:18022469 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56904 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:18022465-18022488
64251 chr18 48604749 48604749 1 + G T ESCA 48604747 + 48604727 48604767 41 AGCATCAAAGAAACACCTTGCTGGATTGAAATTCACTTACA AGCATCAAAGAAACACCTTGCTTGATTGAAATTCACTTACA < 41bp 0.78562409719762 0.495365274816226 0.317518 0.08061805 prediction 0.571248194395241 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604747 chr18:48604749 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_56911 1 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:48604715-48604754
64251 chr18 48604750 48604750 1 + G T LUAD 48604747 + 48604727 48604767 41 AGCATCAAAGAAACACCTTGCTGGATTGAAATTCACTTACA AGCATCAAAGAAACACCTTGCTGTATTGAAATTCACTTACA < 41bp 0.78562409719762 0.440712998067813 0.317518 0.08022705 prediction 0.571248194395241 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604747 chr18:48604750 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_56912 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:48604715-48604754
64251 chr22 21800393 21800393 1 + G T UCEC 21800390 + 21800370 21800410 41 AAGGAGGAGGAGGAGAACGGCAAGGATGCAAGTGAAGACAG AAGGAGGAGGAGGAGAACGGCAATGATGCAAGTGAAGACAG < 41bp 0.785623386527914 0.404506939436934 0.42005458 0.31825066 prediction 0.571246773055829 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800390 chr22:21800393 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_56914 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:21800384-21800414
64251 chr2 235950284 235950284 1 + A C rs3731648 235950280 + 235950260 235950300 41 TTTCGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCGGTC TTTCGAACTGCCTGGCTAAACCACCGGAAGCTGGCCCGGTC < 41bp 0.785585317728792 0.376439734413311 0.34067214 0.31217307 prediction 0.571170635457584 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950280 chr2:235950284 synonymous SNV . 0 25 hm5C_associated_SNPs_56922 0 0 2 GRWD1 POSTAR2 ENCODE chr2:235950251-235950350
64251 chr14 23940183 23940183 1 + A C UCEC 23940179 + 23940159 23940199 41 TCAAGCTGGTGCCTATCCTACAGAAAAGGTAAGATGTACTC TCAAGCTGGTGCCTATCCTACAGACAAGGTAAGATGTACTC < 41bp 0.785564978820533 0.381870143533787 0.21879247 0.19876635 prediction 0.571129957641065 Functional Loss - NGDN ENSG00000129460 CDS Human protein_coding chr14:23940179 chr14:23940183 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_56924 0 0 4 BUD13 POSTAR2 ENCODE chr14:23940160-23940200
64251 chr7 92158171 92158171 1 + A T LIHC 92158167 + 92158147 92158187 41 AGCTAGGGAGTTTATTTGATCACCACGTCCAGAGGGCGGTA AGCTAGGGAGTTTATTTGATCACCTCGTCCAGAGGGCGGTA < 41bp 0.809704588701371 0.524155114606123 0.060389727 0.06504795 prediction 0.571098948190496 Functional Loss - RBM48 ENSG00000127993 CDS Human protein_coding chr7:92158167 chr7:92158171 nonsynonymous SNV 0.633 4 25 hm5C_associated_SNPs_56926 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:92158160-92158180
64251 chr14 23237319 23237319 1 + G T UCEC 23237317 + 23237297 23237337 41 ACACCCCAGTGGGACTGATCCAGAATTTACTGGAATTTATG ACACCCCAGTGGGACTGATCCATAATTTACTGGAATTTATG < 41bp 0.785539460741256 0.454027431078192 0.2702642 0.14403772 prediction 0.571078921482512 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23237317 chr14:23237319 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_56929 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:23237248-23237335
64251 chr5 162909710 162909710 1 + A C rs115405676 162909706 + 162909686 162909726 41 AGCTGGAGAACTCATCATTACAGGAAAAAGCGGCCAAGGCT AGCTGGAGAACTCATCATTACAGGCAAAAGCGGCCAAGGCT < 41bp 0.905009876342356 0.619473767671323 0.40595096 0.26157367 prediction 0.571072217342065 Functional Loss - HMMR ENSG00000072571 CDS Human protein_coding chr5:162909706 chr5:162909710 nonsynonymous SNV 0.168 3 25 hm5C_associated_SNPs_56930 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:162909662-162909711
64251 chr16 1877380 1877380 1 + G T THYM 1877377 + 1877357 1877397 41 GTGCTGTTCCTGAAGCCGTCCACGGCCTACGCGCCCGAGGG GTGCTGTTCCTGAAGCCGTCCACTGCCTACGCGCCCGAGGG < 41bp 0.785535771754518 0.397700104474659 0.2498165 0.057787657 prediction 0.571071543509036 Functional Loss - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877377 chr16:1877380 synonymous SNV . 0 24 hm5C_associated_SNPs_56931 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1877360-1877380
64251 chr3 179478938 179478938 1 + G C LUAD 179478937 + 179478917 179478957 41 TCATCAGTGATGCAGCTGGCCGAGATGGGTTTCCCGCTGGA TCATCAGTGATGCAGCTGGCCCAGATGGGTTTCCCGCTGGA < 41bp 0.785526394673065 0.49044504698453 0.4237288 0.18979028 prediction 0.57105278934613 Functional Loss - USP13 ENSG00000058056 CDS Human protein_coding chr3:179478937 chr3:179478938 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_56933 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr3:179478938-179478939
64251 chr4 184205517 184205517 1 + G T UCEC 184205515 + 184205495 184205535 41 GCGCTCACAGACCTTTTCTCCAGGAGAGCGGAACCAGTACA GCGCTCACAGACCTTTTCTCCATGAGAGCGGAACCAGTACA < 41bp 0.785493259655742 0.463892451530446 0.8955889 0.0735434 prediction 0.570986519311484 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184205515 chr4:184205517 stopgain 0.186 1 23 hm5C_associated_SNPs_56941 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:184205494-184205525
64251 chr16 1545401 1545401 1 + G T LUAD 1545398 + 1545378 1545418 41 CTGCTGGCCAGATTCCTGCGCGAGGGCCGGCTGGCAGTGCT CTGCTGGCCAGATTCCTGCGCGATGGCCGGCTGGCAGTGCT < 41bp 0.785485453256709 0.395271497790079 0.8912099 0.28529698 prediction 0.570970906513418 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545398 chr16:1545401 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_56943 0 0 1 BUD13 POSTAR2 ENCODE chr16:1545295-1545410
64251 chr21 46624505 46624505 1 + G T LUAD 46624503 + 46624483 46624523 41 GGCATCCAGGGATCCCTGCTCAGCATTTTCGTGGAGCCCAT GGCATCCAGGGATCCCTGCTCATCATTTTCGTGGAGCCCAT < 41bp 0.785466182315509 0.469516735777537 0.111322016 0.053435862 prediction 0.570932364631018 Functional Loss - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46624503 chr21:46624505 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_56946 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378375 chr21:46624500-46624520
64251 chr4 52945942 52945942 1 + G T LGG 52945939 + 52945919 52945959 41 CGAGCCATGAATGTCAATCCCAAGATTTCATTCCCTCCTGT CGAGCCATGAATGTCAATCCCAATATTTCATTCCCTCCTGT < 41bp 0.785448350829314 0.399260897491513 0.28468263 0.13774437 prediction 0.570896701658628 Functional Loss - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52945939 chr4:52945942 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_56949 0 0 1 U2AF2 POSTAR2 ENCODE chr4:52945893-52946028
64251 chr19 13885348 13885348 1 + A C rs80019370 13885344 + 13885324 13885364 41 CAAACCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTGAAA CAAACCCGCAAAGAGTAAGACGGCCGCGGCAGCCTCTGAAA < 41bp 0.902425228300871 0.616977375311278 0.46340358 0.31676295 prediction 0.570895705979185 Functional Loss - C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13885344 chr19:13885348 nonsynonymous SNV 0.032 0 25 hm5C_associated_SNPs_56950 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr19:13885338-13885366
64251 chr3 49570587 49570587 1 + G T LUSC 49570584 + 49570564 49570604 41 GAGGGCAAGGGCTCCCGTCCCAAGAACATGACCCCATACCG GAGGGCAAGGGCTCCCGTCCCAATAACATGACCCCATACCG < 41bp 0.873568771836771 0.58815416392285 0.10758352 0.02833873 prediction 0.570829215827843 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49570584 chr3:49570587 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_56953 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49570560-49570597
64251 chr20 39978454 39978454 1 + G T SKCM 39978452 + 39978432 39978472 41 AACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGACCC AACATCCCCTAAGAGCGACTCGTAGCTGGAGGTGCGGACCC < 41bp 0.785375563513099 0.433269298425719 0.9104903 0.41919208 prediction 0.570751127026198 Functional Loss - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39978452 chr20:39978454 stopgain 0.957 1 23 hm5C_associated_SNPs_56961 0 0 3 GRWD1 POSTAR2 ENCODE chr20:39978453-39978483
64251 chr11 68369359 68369359 1 + C T CESC 68369357 + 68369337 68369377 41 AGATTCTTTAAGGAGTAATTCTCCAGTGGAAATGGAAACCA AGATTCTTTAAGGAGTAATTCTTCAGTGGAAATGGAAACCA < 41bp 0.785360228243493 0.498617238366709 0.9291013 0.06338033 prediction 0.570720456486986 Functional Loss - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68369357 chr11:68369359 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_56964 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:68369338-68369362
64251 chr1 33235331 33235331 1 + G C COAD 33235330 + 33235310 33235350 41 CTGGAAAGTCAGGGCGGCGTCGGCGGGAGCGGCGGAGCACT CTGGAAAGTCAGGGCGGCGTCCGCGGGAGCGGCGGAGCACT < 41bp 0.785341859040085 0.484716390651239 0.91764915 0.90288025 prediction 0.57068371808017 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33235330 chr1:33235331 nonsynonymous SNV 0.809 4 22 hm5C_associated_SNPs_56970 0 0 1 FXR2 POSTAR2 ENCODE chr1:33235306-33235363
64251 chr22 46722347 46722347 1 + G T UCEC 46722345 + 46722325 46722365 41 TTTGCCAGGGTCACTGTCCACAGCACCCCGGTTAGACGCTC TTTGCCAGGGTCACTGTCCACATCACCCCGGTTAGACGCTC < 41bp 0.785333700261056 0.448511561896898 0.16462544 0.032453656 prediction 0.570667400522113 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46722345 chr22:46722347 nonsynonymous SNV 0.226 3 23 hm5C_associated_SNPs_56971 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr22:46722334-46722376
64251 chr10 5948241 5948241 1 + G T LUAD 5948239 + 5948219 5948259 41 CCTCTGAGGAAGAGAGTAACCAGGCTACCGGGACCAGCCGG CCTCTGAGGAAGAGAGTAACCATGCTACCGGGACCAGCCGG < 41bp 0.868653309193796 0.583322400050985 0.820959 0.09454054 prediction 0.570661818285624 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948239 chr10:5948241 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_56972 0 0 2 FMR1 POSTAR2 ENCODE chr10:5948077-5948355
64251 chr3 197687166 197687166 1 + G T LIHC 197687163 + 197687143 197687183 41 GGGTTACTCGGGCTCAGGCCCGGGCCGGAGCCGGTGGCGCT GGGTTACTCGGGCTCAGGCCCGGTCCGGAGCCGGTGGCGCT < 41bp 0.785305520216673 0.411889641208198 0.8972467 0.659302 prediction 0.570611040433346 Functional Loss - LMLN ENSG00000185621 CDS Human protein_coding chr3:197687163 chr3:197687166 nonsynonymous SNV 0.041 1 24 hm5C_associated_SNPs_56976 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:197687166-197687167
64251 chr20 44430077 44430077 1 + G T OV 44430074 + 44430054 44430094 41 CAGAAGAAGAATGTGCCCATCGAGGAAGCCCCCTTCCTAAA CAGAAGAAGAATGTGCCCATCGATGAAGCCCCCTTCCTAAA < 41bp 0.78527019498691 0.395047577477294 0.902322 0.24961591 prediction 0.57054038997382 Functional Loss - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44430074 chr20:44430077 stopgain 1.000 1 24 hm5C_associated_SNPs_56979 0 0 5 EFTUD2 POSTAR2 ENCODE chr20:44430035-44430082
64251 chr12 7302240 7302240 1 + G T UCEC 7302238 + 7302218 7302258 41 TCCTGGACACAACCTCTCTGCAGCAGCGGGGGCTGGAGCTC TCCTGGACACAACCTCTCTGCATCAGCGGGGGCTGGAGCTC < 41bp 0.785269125039401 0.450660303368765 0.25052086 0.05688393 prediction 0.570538250078803 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7302238 chr12:7302240 nonsynonymous SNV 0.934 0 23 hm5C_associated_SNPs_56980 0 0 5 LSM11 POSTAR2 ENCODE chr12:7302179-7302271
64251 chr16 90102867 90102867 1 + A C UCEC 90102863 + 90102843 90102883 41 TGCGGAGAAAGACTGAGCTCCACGAAGTGGAGGAGAGGAAG TGCGGAGAAAGACTGAGCTCCACGCAGTGGAGGAGAGGAAG < 41bp 0.785266016474399 0.37101485449321 0.09133929 0.06655446 prediction 0.570532032948799 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90102863 chr16:90102867 nonsynonymous SNV 0.989 3 25 hm5C_associated_SNPs_56981 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:90102806-90102870
64251 chr11 70281209 70281209 1 + G T HNSC 70281206 + 70281186 70281226 41 TGATTGACGACGGCTGGTGGCGCGGGGTGTGCAAGGGCCGG TGATTGACGACGGCTGGTGGCGCTGGGTGTGCAAGGGCCGG < 41bp 0.891571632061463 0.606327053122565 0.8629674 0.24531111 prediction 0.570489157877796 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281206 chr11:70281209 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_56987 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70281150-70281227
64251 chr1 111439325 111439325 1 + A T UCEC 111439321 + 111439301 111439341 41 GAGTGATTGGACCAGTGGCCCACCAGCATCTTGCCCCTCAG GAGTGATTGGACCAGTGGCCCACCTGCATCTTGCCCCTCAG < 41bp 0.824846198276562 0.539619043024913 0.091514796 0.05532542 prediction 0.570454310503298 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111439321 chr1:111439325 synonymous SNV . 0 25 hm5C_associated_SNPs_56991 0 0 2 SND1 POSTAR2 ENCODE chr1:111439283-111439343
64251 chr19 54377599 54377599 1 + G T BLCA 54377597 + 54377577 54377617 41 AGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGC AGAAGTATGGCGGCCAGCCTCGTCGCTCGAGAGATGTAAGC < 41bp 0.785221095136794 0.454165385409457 0.9052127 0.26113147 prediction 0.570442190273587 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377597 chr19:54377599 synonymous SNV . 0 23 hm5C_associated_SNPs_56992 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54377579-54377607
64251 chr17 18087944 18087944 1 + G T SARC 18087942 + 18087922 18087962 41 ACACGGTGGACCGGGCCCCACTGCGCAACAAGTACTTCTTC ACACGGTGGACCGGGCCCCACTTCGCAACAAGTACTTCTTC < 41bp 0.785213442132546 0.450538205380916 0.32517838 0.123304605 prediction 0.570426884265093 Functional Loss - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18087942 chr17:18087944 synonymous SNV . 0 23 hm5C_associated_SNPs_56994 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18087911-18087948
64251 chr17 18112805 18112805 1 + G T rs143658465 18112802 + 18112782 18112822 41 GGCTGGTGCCTCCTCCGCTTCAGGGTATGGGAGTTGGTGAA GGCTGGTGCCTCCTCCGCTTCAGTGTATGGGAGTTGGTGAA < 41bp 0.785211394597134 0.438724787825323 0.8982275 0.24683097 prediction 0.570422789194268 Functional Loss - ALKBH5 ENSG00000091542 UTR3 Human protein_coding chr17:18112802 chr17:18112805 . . 0 24 hm5C_associated_SNPs_56996 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:18112331-18112834
64251 chr5 137681245 137681245 1 + G T TGCT 137681242 + 137681222 137681262 41 AAACTGGGGTCAAGCGGCGCCACGAGGAAGACCCCCGGCGT AAACTGGGGTCAAGCGGCGCCACTAGGAAGACCCCCGGCGT < 41bp 0.888836435099855 0.603657402360333 0.40069646 0.14619657 prediction 0.570358065479044 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137681242 chr5:137681245 stopgain 0.989 1 24 hm5C_associated_SNPs_57003 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:137681219-137681245
64251 chr8 42176906 42176906 1 + G T LUAD 42176903 + 42176883 42176923 41 AAACCAGCATCCAGATTGACCTGGAGAAGTACAGCGAGCAA AAACCAGCATCCAGATTGACCTGTAGAAGTACAGCGAGCAA < 41bp 0.785173390973614 0.419893065011956 0.12835887 0.12339339 prediction 0.570346781947228 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42176903 chr8:42176906 stopgain 1.000 1 24 hm5C_associated_SNPs_57005 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:42176897-42176938
64251 chr5 115627220 115627220 1 + G T LUSC 115627217 + 115627197 115627237 41 GTTTTTCTTCCTTACAGAGCCTGGAGAAAGTTCTTGTGGAA GTTTTTCTTCCTTACAGAGCCTGTAGAAAGTTCTTGTGGAA < 41bp 0.785144380781599 0.443413363560987 0.21195671 0.026909888 prediction 0.570288761563199 Functional Loss - COMMD10 ENSG00000145781 CDS Human protein_coding chr5:115627217 chr5:115627220 stopgain 0.999 0 24 hm5C_associated_SNPs_57011 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:115627200-115627222
64251 chr6 74171766 74171766 1 + G T BRCA 74171764 + 74171744 74171784 41 CTCGGTGCGGCTCTCGGACTCTGCTCCTCACTCACCGCGTG CTCGGTGCGGCTCTCGGACTCTTCTCCTCACTCACCGCGTG < 41bp 0.785138458447313 0.45886228173318 0.06915614 0.06258747 prediction 0.570276916894626 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74171764 chr6:74171766 synonymous SNV . 0 23 hm5C_associated_SNPs_57012 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:74171748-74171779
64251 chr2 159519930 159519930 1 + C T THCA 159519928 + 159519908 159519948 41 TGGAAGGCTCTGCAGGGTCTCTCCAGAACCTCTCTGCTGGC TGGAAGGCTCTGCAGGGTCTCTTCAGAACCTCTCTGCTGGC < 41bp 0.785297182329637 0.50015951617623 0.9632076 0.3551761 prediction 0.570275332306814 Functional Loss - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159519928 chr2:159519930 synonymous SNV . 0 23 hm5C_associated_SNPs_57013 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:159519920-159519931
64251 chr3 5244719 5244719 1 + C T SKCM 5244717 + 5244697 5244737 41 GCACAGCGGGAGCCGGTTCCCTCCTGGTGGAATTTGGGATT GCACAGCGGGAGCCGGTTCCCTTCTGGTGGAATTTGGGATT < 41bp 0.790167954029653 0.505043569543793 0.18899977 0.22004268 prediction 0.570248768971719 Functional Loss - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5244717 chr3:5244719 synonymous SNV . 0 23 hm5C_associated_SNPs_57015 0 0 1 GRWD1 POSTAR2 ENCODE chr3:5244692-5244814
64251 chr4 106744216 106744216 1 + G T LUAD 106744214 + 106744194 106744234 41 GGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGTATTTTA GGTGACAGAATTGTGGATTTCTTCAGCGGTGGGGTATTTTA < 41bp 0.825957606671338 0.540862088920814 0.30150753 0.36479533 prediction 0.570191035501048 Functional Loss - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106744214 chr4:106744216 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_57021 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr4:106744216-106744237
64251 chr1 110883070 110883070 1 + G T GBM 110883067 + 110883047 110883087 41 CCCTGCATACAGTCTTGAGCCAAGGGTGGGAGCTGGAGCAG CCCTGCATACAGTCTTGAGCCAATGGTGGGAGCTGGAGCAG < 41bp 0.897162211033579 0.612068942429146 0.58284456 0.22838864 prediction 0.570186537208865 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883067 chr1:110883070 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_57022 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:110883036-110883075
64251 chr12 4918903 4918903 1 + G T rs41276712 4918900 + 4918880 4918920 41 GGCGAAGCCACGCGTCTTTTCGGGCAGCCAATTTCACACGC GGCGAAGCCACGCGTCTTTTCGGTCAGCCAATTTCACACGC < 41bp 0.840816137238504 0.555729519846521 0.9157068 0.34495202 prediction 0.570173234783967 Functional Loss - KCNA6 ENSG00000151079 UTR5 Human protein_coding chr12:4918900 chr12:4918903 . . 0 24 hm5C_associated_SNPs_57023 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:4918902-4918903
64251 chr17 37619057 37619057 1 + G T GBM 37619054 + 37619034 37619074 41 CCTCGGGAGCTTCTTATGGCCAAGATTATGACCTTAGTCCC CCTCGGGAGCTTCTTATGGCCAATATTATGACCTTAGTCCC < 41bp 0.785066496102244 0.416796856512221 0.0318729 0.015114874 prediction 0.570132992204487 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37619054 chr17:37619057 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_57025 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:37619027-37619057
64251 chr11 64893239 64893239 1 + G T OV 64893237 + 64893217 64893257 41 AAGATTTTCTGAGCCCGCTGCTGGGGAAGACACCTGTCACC AAGATTTTCTGAGCCCGCTGCTTGGGAAGACACCTGTCACC < 41bp 0.785061062170533 0.461222514916743 0.8115246 0.21005943 prediction 0.570122124341067 Functional Loss - MRPL49 ENSG00000149792 CDS Human protein_coding chr11:64893237 chr11:64893239 synonymous SNV . 0 23 hm5C_associated_SNPs_57027 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:64893213-64893239
64251 chr1 90399291 90399291 1 + G T LUAD 90399289 + 90399269 90399309 41 TGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAA TGAGACAGCATGCGAAGACTCATAGGAAAACAAGCAGAGAA < 41bp 0.785053665143712 0.466356820293481 0.89700496 0.63941586 prediction 0.570107330287424 Functional Loss - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90399289 chr1:90399291 stopgain 0.999 1 23 hm5C_associated_SNPs_57030 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:90399261-90399295
64251 chr6 160232794 160232794 1 + G T UCEC 160232791 + 160232771 160232811 41 TTTCCTGTTCTCATTGATACCAAGAGTGTAACAAAGGATAT TTTCCTGTTCTCATTGATACCAATAGTGTAACAAAGGATAT < 41bp 0.785039698617383 0.420780805066343 0.19852337 0.100907505 prediction 0.570079397234765 Functional Loss - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160232791 chr6:160232794 nonsynonymous SNV 0.896 3 24 hm5C_associated_SNPs_57031 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:160232781-160232819
64251 chr6 24785967 24785967 1 + A C UCEC 24785963 + 24785943 24785983 41 GGATTCTCTAGTGGAAGACTCAGAAATTGGCACGTGTGCTG GGATTCTCTAGTGGAAGACTCAGACATTGGCACGTGTGCTG < 41bp 0.785036593398209 0.403102477887064 0.574766 0.18347579 prediction 0.570073186796419 Functional Loss - GMNN ENSG00000112312 CDS Human protein_coding chr6:24785963 chr6:24785967 nonsynonymous SNV 0.044 0 25 hm5C_associated_SNPs_57033 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:24785965-24785992
64251 chr6 24785965 24785965 1 + G T UCEC 24785963 + 24785943 24785983 41 GGATTCTCTAGTGGAAGACTCAGAAATTGGCACGTGTGCTG GGATTCTCTAGTGGAAGACTCATAAATTGGCACGTGTGCTG < 41bp 0.785036593398209 0.472428707849188 0.574766 0.07315442 prediction 0.570073186796419 Functional Loss - GMNN ENSG00000112312 CDS Human protein_coding chr6:24785963 chr6:24785965 stopgain 0.129 0 23 hm5C_associated_SNPs_57034 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:24785965-24785992
64251 chr11 44129312 44129312 1 + G T UCEC 44129309 + 44129289 44129329 41 CCGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAAGCACC CCGGGGTCCTGCCCTCATCCCAATAATGAAGACCAAGCACC < 41bp 0.785002511700901 0.407400377617283 0.0929932 0.06283796 prediction 0.570005023401801 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129309 chr11:44129312 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57041 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:44129280-44129312
64251 chr2 85823724 85823724 1 + A T rs139155037 85823720 + 85823700 85823740 41 CACCTGCCTCCACCAGCTGCCAAGACTGTGGTTGAGAACCT CACCTGCCTCCACCAGCTGCCAAGTCTGTGGTTGAGAACCT < 41bp 0.808814702802538 0.523818279800056 0.25018936 0.3734865 prediction 0.569992846004964 Functional Loss - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85823720 chr2:85823724 nonsynonymous SNV 0.792 1 25 hm5C_associated_SNPs_57043 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:85823705-85823726
64251 chr1 248059203 248059203 1 + G T LUAD 248059201 + 248059181 248059221 41 CCATCCAGCTCTTCCTGTTCCTGGGTCTGGGTGGTGTGGAG CCATCCAGCTCTTCCTGTTCCTTGGTCTGGGTGGTGTGGAG < 41bp 0.862973289762041 0.577987645236085 0.4240089 0.22152713 prediction 0.569971289051913 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059201 chr1:248059203 synonymous SNV . 0 23 hm5C_associated_SNPs_57046 0 0 1 RBM15 POSTAR2 ENCODE chr1:248059192-248059245
64251 chr1 36752516 36752516 1 + G C BLCA 36752515 + 36752495 36752535 41 CCATGGCCAGATGCCACCTACGGCACTGGTTCTGCATCACG CCATGGCCAGATGCCACCTACCGCACTGGTTCTGCATCACG < 41bp 0.784968830711189 0.47348307275704 0.37585902 0.078014165 prediction 0.569937661422378 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752515 chr1:36752516 nonsynonymous SNV 0.449 2 22 hm5C_associated_SNPs_57048 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:36752500-36752520
64251 chr16 27460310 27460310 1 - C A LUAD 27460313 - 27460293 27460333 41 AGTCTGTCCAGGAGGCTTCCCAGGGGCCCTCCTAGCCCAGG AGTCTGTCCAGGAGGCTTCCCAGTGGCCCTCCTAGCCCAGG < 41bp 0.905045984605901 0.620077472395357 0.94583637 0.7285199 prediction 0.569937024421087 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27460313 chr16:27460310 synonymous SNV . 0 24 hm5C_associated_SNPs_57049 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:27460291-27460329
64251 chr19 18307224 18307224 1 + A C rs11552160 18307220 + 18307200 18307240 41 CTCTGGGCCAAGCCACCAATCCAGAGCTCCCTCAGGTCCTG CTCTGGGCCAAGCCACCAATCCAGCGCTCCCTCAGGTCCTG < 41bp 0.784942135382794 0.40662582727885 0.79157495 0.7713674 prediction 0.569884270765588 Functional Loss - MPV17L2 ENSG00000254858 UTR3 Human protein_coding chr19:18307220 chr19:18307224 . . 0 25 hm5C_associated_SNPs_57053 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:18307137-18307247
64251 chr8 75924706 75924706 1 + G T LUAD 75924703 + 75924683 75924723 41 CTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTG CTGGAAAGATCTGCAGAATCCTGTGCTGAAAGTTGCTTGTG < 41bp 0.890170804979906 0.605230161374034 0.8463018 0.20129931 prediction 0.569881287211744 Functional Loss - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75924703 chr8:75924706 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_57054 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr8:75924680-75924707
64251 chr17 33321450 33321450 1 + G T UCEC 33321447 + 33321427 33321467 41 CTCAAGCCCGTCCTTCCTCACAAGGTATGAGTGCCTTCCTT CTCAAGCCCGTCCTTCCTCACAATGTATGAGTGCCTTCCTT < 41bp 0.784935250456052 0.387825822648788 0.896543 0.10324687 prediction 0.569870500912105 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33321447 chr17:33321450 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_57055 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr17:33321443-33321464
64251 chr1 40882508 40882508 1 + G T THCA 40882506 + 40882486 40882526 41 CACAGCCTACCCCAGCTTCCCCGGGGTTACACCTCCTAACA CACAGCCTACCCCAGCTTCCCCTGGGTTACACCTCCTAACA < 41bp 0.784927227988717 0.44684913939613 0.9340372 0.23658612 prediction 0.569854455977433 Functional Loss - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40882506 chr1:40882508 nonsynonymous SNV 0.764 3 23 hm5C_associated_SNPs_57056 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:40882498-40882525
64251 chr1 33291714 33291714 1 + G T SKCM 33291711 + 33291691 33291731 41 TTCTCCAGAAATGATGTGCTCACGGGTGCCCTCTGAACAGT TTCTCCAGAAATGATGTGCTCACTGGTGCCCTCTGAACAGT < 41bp 0.784915717325425 0.410897885761019 0.631272 0.13700065 prediction 0.569831434650849 Functional Loss - S100PBP ENSG00000116497 CDS Human protein_coding chr1:33291711 chr1:33291714 nonsynonymous SNV 0.465 0 24 hm5C_associated_SNPs_57057 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:33291711-33291739
64251 chr12 50492562 50492562 1 + G T THYM 50492559 + 50492539 50492579 41 GCTGAGTTCTACTTCCAGCCCTGGGCTCAGGAGGCTGTGTG GCTGAGTTCTACTTCCAGCCCTGTGCTCAGGAGGCTGTGTG < 41bp 0.784908643815475 0.393182576165553 0.13278335 0.14878917 prediction 0.569817287630951 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50492559 chr12:50492562 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_57058 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:50492534-50492568
64251 chr4 128584639 128584639 1 + G T STAD 128584637 + 128584617 128584657 41 AGTGATTTAGTCAAGCTTCTCTGGGGAGAAGAGGTTGAAGG AGTGATTTAGTCAAGCTTCTCTTGGGAGAAGAGGTTGAAGG < 41bp 0.848217419656825 0.56331472308468 0.6847353 0.0692209 prediction 0.569805393144289 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128584637 chr4:128584639 nonsynonymous SNV 0.945 1 23 hm5C_associated_SNPs_57061 0 0 3 GRWD1 POSTAR2 ENCODE chr4:128584539-128584739
64251 chr10 89264702 89264702 1 + G T HNSC 89264699 + 89264679 89264719 41 CGCGCGCCCGGCTGCCTCCTCCGGACCTCCGTAGCGCCTGC CGCGCGCCCGGCTGCCTCCTCCGTACCTCCGTAGCGCCTGC < 41bp 0.895757977109602 0.610876829478337 0.76869154 0.4854053 prediction 0.56976229526253 Functional Loss - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89264699 chr10:89264702 synonymous SNV . 0 24 hm5C_associated_SNPs_57063 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:89264700-89264720
64251 chr1 171753518 171753518 1 + G T LUSC 171753515 + 171753495 171753535 41 AGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGTCTCT AGCCAGCTGCGCCGCAAGGCCAGTCTGGGGAGTGTGTCTCT < 41bp 0.784878183068148 0.396288396781171 0.44093367 0.24323735 prediction 0.569756366136297 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753515 chr1:171753518 nonsynonymous SNV 0.991 0 24 hm5C_associated_SNPs_57064 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:171753498-171753536
64251 chr2 172569285 172569285 1 + A T OV 172569281 + 172569261 172569301 41 TCCTACAACCATTTAGGACGCTGCATTGGGATACAGATCCA TCCTACAACCATTTAGGACGCTGCTTTGGGATACAGATCCA < 41bp 0.784877185244021 0.479909430884353 0.09459126 0.07371056 prediction 0.569754370488043 Functional Loss - DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172569281 chr2:172569285 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_57065 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:172569269-172569297
64251 chr1 9782376 9782376 1 + G T SARC 9782374 + 9782354 9782394 41 TACAGCAACGAGGAGGCAGGCAGCGGCGGCAGCGTGGGCAT TACAGCAACGAGGAGGCAGGCATCGGCGGCAGCGTGGGCAT < 41bp 0.78487156710832 0.435112338609166 0.74185705 0.54969436 prediction 0.569743134216639 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9782374 chr1:9782376 nonsynonymous SNV 0.165 2 23 hm5C_associated_SNPs_57066 0 0 1 PPIG POSTAR2 ENCODE chr1:9782330-9782408
64251 chr19 45572367 45572367 1 + G T UCEC 45572365 + 45572345 45572385 41 CACAAGAAAAGATGATCCAGCAGGAGCATGAGCGGCAGGTG CACAAGAAAAGATGATCCAGCATGAGCATGAGCGGCAGGTG < 41bp 0.86026250387603 0.575398729525264 0.8807386 0.07848254 prediction 0.569727548701531 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45572365 chr19:45572367 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57069 0 0 7 BUD13 POSTAR2 ENCODE chr19:45572364-45572381
64251 chr11 65826424 65826424 1 + G T SARC 65826422 + 65826402 65826442 41 GTCCCGTGGCTCTGATTCCCCAGCAGCTGATGTTGAGATTG GTCCCGTGGCTCTGATTCCCCATCAGCTGATGTTGAGATTG < 41bp 0.853950063732904 0.56912347290688 0.10619435 0.012470603 prediction 0.56965318165205 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826422 chr11:65826424 nonsynonymous SNV 0.956 0 23 hm5C_associated_SNPs_57070 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65826360-65826460
64251 chr10 135166047 135166047 1 + G T rs573022495 135166044 + 135166024 135166064 41 GCTAGACAAATAAACCCCAGCAGGCCGGGCGCGGTGGCTCA GCTAGACAAATAAACCCCAGCAGTCCGGGCGCGGTGGCTCA < 41bp 0.784806458728422 0.412308282207706 0.47493374 0.3319624 prediction 0.569612917456844 Functional Loss - PRAP1 ENSG00000165828 UTR3 Human protein_coding chr10:135166044 chr10:135166047 . . 0 24 hm5C_associated_SNPs_57076 0 0 1 LARP4 POSTAR2 ENCODE chr10:135165888-135166049
64251 chr11 608235 608235 1 + G T LUSC 608232 + 608212 608252 41 GAGAGGAGCCCACAGAGAGCCAGGGCCTGGCTGCCCGGCTG GAGAGGAGCCCACAGAGAGCCAGTGCCTGGCTGCCCGGCTG < 41bp 0.897943855935927 0.613138599293047 0.9307396 0.46740758 prediction 0.56961051328576 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608232 chr11:608235 nonsynonymous SNV 0.017 1 24 hm5C_associated_SNPs_57077 0 0 1 FMR1 POSTAR2 ENCODE chr11:608233-608284
64251 chr14 101512312 101512312 1 + G T UCEC 101512309 + 101512289 101512329 41 GTTTATTGACATGGAATATACAAGGGCAAGCTCTCTGTGAG GTTTATTGACATGGAATATACAATGGCAAGCTCTCTGTGAG < 41bp 0.840870502061709 0.556068083528956 0.8320136 0.16342235 prediction 0.569604837065506 Functional Loss - MIR381 ENSG00000199020 ncRNA_exonic Human miRNA chr14:101512309 chr14:101512312 . . 0 24 hm5C_associated_SNPs_57079 0 0 17 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101512300-101512320
64251 chr8 124113152 124113152 1 + G T OV 124113150 + 124113130 124113170 41 CGATGAAGGAATTAGCTCATCAGCAATTAGCCCACATGGAC CGATGAAGGAATTAGCTCATCATCAATTAGCCCACATGGAC < 41bp 0.784772679011434 0.471263446393916 0.21580592 0.03601876 prediction 0.569545358022868 Functional Loss - TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124113150 chr8:124113152 nonsynonymous SNV 0.962 0 23 hm5C_associated_SNPs_57082 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:124113142-124113175
64251 chr1 31192039 31192039 1 + G T rs113950551 31192037 + 31192017 31192057 41 GGCAGGCAGCTCTGAGATGCCCGGAGGGATGTGATGCCCCA GGCAGGCAGCTCTGAGATGCCCTGAGGGATGTGATGCCCCA < 41bp 0.841193813527184 0.556430872052889 0.6990874 0.2713885 prediction 0.56952588294859 Functional Loss - MATN1-AS1 ENSG00000186056 ncRNA_exonic Human antisense chr1:31192037 chr1:31192039 . . 0 23 hm5C_associated_SNPs_57084 0 0 2 RBM15 POSTAR2 ENCODE chr1:31191968-31192042
64251 chr19 36120572 36120572 1 + G T UCEC 36120570 + 36120550 36120590 41 TTATCGCGACCAACACATACCAGCAGGTACGGCTGAGCTAA TTATCGCGACCAACACATACCATCAGGTACGGCTGAGCTAA < 41bp 0.851195748138927 0.566457823638601 0.23582122 0.070528805 prediction 0.569475849000652 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120570 chr19:36120572 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_57086 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:36120544-36120572
64251 chr12 6955994 6955994 1 + G T COAD 6955991 + 6955971 6956011 41 ACGATAACAGGGTGAGCTGCCTGGGAGTCACAGCTGACGGG ACGATAACAGGGTGAGCTGCCTGTGAGTCACAGCTGACGGG < 41bp 0.892282935701897 0.607562094876978 0.51523125 0.07954183 prediction 0.569441681649839 Functional Loss - CDCA3;GNB3 ENSG00000111664;ENSG00000111665 CDS Human other chr12:6955991 chr12:6955994 stopgain 0.989 1 24 hm5C_associated_SNPs_57090 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6955978-6955999
64251 chr1 230807386 230807386 1 + G T UCEC 230807383 + 230807363 230807403 41 AGTCACAGGAGGTGCCATCTCCAGGTAATTTAAACAACCCT AGTCACAGGAGGTGCCATCTCCATGTAATTTAAACAACCCT < 41bp 0.784699752391099 0.401820415361134 0.9031906 0.505118 prediction 0.569399504782198 Functional Loss - COG2 ENSG00000135775 CDS Human protein_coding chr1:230807383 chr1:230807386 nonsynonymous SNV 0.127 4 24 hm5C_associated_SNPs_57092 0 0 2 PRPF8 POSTAR2 ENCODE chr1:230807348-230807430
64251 chr5 225677 225677 1 + G T UCEC 225674 + 225654 225694 41 CAGGCCCCCGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCT CAGGCCCCCGCCGCCGTGGTCGATGTGATGGGCGGGAGGCT < 41bp 0.784663018954211 0.388937570379944 0.927886 0.7881746 prediction 0.569326037908423 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:225674 chr5:225677 nonsynonymous SNV 0.414 3 24 hm5C_associated_SNPs_57094 0 0 4 PRPF8 POSTAR2 ENCODE chr5:225639-225722
64251 chr2 70057203 70057203 1 + G T SARC 70057201 + 70057181 70057221 41 AAGCGGAGCAGCGGGTCCTTCTGCTACTGTCACCCTGACTC AAGCGGAGCAGCGGGTCCTTCTTCTACTGTCACCCTGACTC < 41bp 0.784628389220841 0.457020641375479 0.16026586 0.2097902 prediction 0.569256778441682 Functional Loss - GMCL1 ENSG00000087338 CDS Human protein_coding chr2:70057201 chr2:70057203 nonsynonymous SNV 0.984 1 23 hm5C_associated_SNPs_57099 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr2:70057195-70057217
64251 chr2 62449949 62449949 1 + G T LIHC 62449947 + 62449927 62449967 41 ACCCCGACCTTTCAGATATGCTGAAATTTGAGAGTGAGAAG ACCCCGACCTTTCAGATATGCTTAAATTTGAGAGTGAGAAG < 41bp 0.784628087687451 0.475211087390248 0.10076475 0.10238767 prediction 0.569256175374903 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449947 chr2:62449949 synonymous SNV . 0 23 hm5C_associated_SNPs_57101 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:62449940-62449960
64251 chr19 48965204 48965204 1 + A C STAD 48965200 + 48965180 48965220 41 GGTGGCCAGGGCGCGCGCTACCTGAGCGACCTGTTCACCAC GGTGGCCAGGGCGCGCGCTACCTGCGCGACCTGTTCACCAC < 41bp 0.78462101153691 0.395942087603995 0.50798553 0.20869777 prediction 0.569242023073821 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48965200 chr19:48965204 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_57102 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:48965178-48965216
64251 chr19 57744021 57744021 1 + G T COAD 57744018 + 57743998 57744038 41 TACAAGGAGCTGCAGAAAAGCGAGAAATTAGATGAACAGCG TACAAGGAGCTGCAGAAAAGCGATAAATTAGATGAACAGCG < 41bp 0.894049896846593 0.609457981749612 0.6178023 0.6746725 prediction 0.569183830193962 Functional Loss - AURKC ENSG00000105146 CDS Human protein_coding chr19:57744018 chr19:57744021 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_57105 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:57744021-57744043
64251 chr17 53851197 53851197 1 + G T LUSC 53851195 + 53851175 53851215 41 GGCGAGAGGTCTGGGGTGATCCGGGTGAAGCAATACAAGCA GGCGAGAGGTCTGGGGTGATCCTGGTGAAGCAATACAAGCA < 41bp 0.861145654969477 0.57656751920521 0.9380989 0.8500122 prediction 0.569156271528534 Functional Loss - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851195 chr17:53851197 nonsynonymous SNV 0.935 5 23 hm5C_associated_SNPs_57108 0 0 5 IGF2BP2 POSTAR2 ENCODE chr17:53851093-53851209
64251 chr12 12870888 12870888 1 + G C LUAD 12870887 + 12870867 12870907 41 CTCTTCGGCCCGGTGGACCACGAAGAGTTAACCCGGGACTT CTCTTCGGCCCGGTGGACCACCAAGAGTTAACCCGGGACTT < 41bp 0.784574415809237 0.489445597228051 0.8404858 0.90038174 prediction 0.569148831618474 Functional Loss - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12870887 chr12:12870888 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_57109 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:12870857-12870954
64251 chr1 156616805 156616805 1 + G C LUSC 156616804 + 156616784 156616824 41 GGAGTGCGCGTCAAGGTGAACGAGGCCTACCGGTTCCGCGT GGAGTGCGCGTCAAGGTGAACCAGGCCTACCGGTTCCGCGT < 41bp 0.784531782952491 0.482794777500681 0.91443586 0.91188335 prediction 0.569063565904983 Functional Loss - BCAN ENSG00000132692 CDS Human protein_coding chr1:156616804 chr1:156616805 nonsynonymous SNV 0.967 3 22 hm5C_associated_SNPs_57113 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:156616800-156616820
64251 chr8 23147725 23147725 1 + G T UCEC 23147723 + 23147703 23147743 41 AACAGAGGACCTAAAGGGCCCAGGACAAAGGTGTGAGAATG AACAGAGGACCTAAAGGGCCCATGACAAAGGTGTGAGAATG < 41bp 0.820512790581139 0.535984621119151 0.31782514 0.06744519 prediction 0.569056338923977 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147723 chr8:23147725 stopgain 0.001 0 23 hm5C_associated_SNPs_57114 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23147678-23147731
64251 chr18 8813162 8813162 1 + C T SKCM 8813160 + 8813140 8813180 41 ACCGGGAGAAGGTGGAACTTCTCGACCGCCTGGACAGAGAT ACCGGGAGAAGGTGGAACTTCTTGACCGCCTGGACAGAGAT < 41bp 0.790915901418718 0.506409708140185 0.6587434 0.14838713 prediction 0.569012386557064 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8813160 chr18:8813162 synonymous SNV . 0 23 hm5C_associated_SNPs_57117 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr18:8813160-8813180
64251 chr4 113567980 113567980 1 + A T BLCA 113567976 + 113567956 113567996 41 CCCAAAAATGTTAATCACAGCTGGATTGAAAGAGTATTTGG CCCAAAAATGTTAATCACAGCTGGTTTGAAAGAGTATTTGG < 41bp 0.784498948289089 0.482058448288973 0.14936638 0.24406397 prediction 0.568997896578177 Functional Loss - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113567976 chr4:113567980 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_57118 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr4:113567965-113568047
64251 chr11 710240 710240 1 + G T rs532564936 710237 + 710217 710257 41 CCTTCTCCAAGGGGGCTTCCCTGGAGGGAGGGAGGGGGCTT CCTTCTCCAAGGGGGCTTCCCTGTAGGGAGGGAGGGGGCTT < 41bp 0.817868742426832 0.533401547798568 0.8442526 0.34558558 prediction 0.568934389256528 Functional Loss - EPS8L2 ENSG00000269915 ncRNA_intronic Human antisense chr11:710237 chr11:710240 . . 0 24 hm5C_associated_SNPs_57123 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:710218-710267
64251 chr14 21167809 21167809 1 + G T UCEC 21167806 + 21167786 21167826 41 AGCACCACCAATATCCAATGCAAGAACGGCAAGATGAACTG AGCACCACCAATATCCAATGCAATAACGGCAAGATGAACTG < 41bp 0.784437747027219 0.403872729273096 0.11786133 0.06974551 prediction 0.568875494054438 Functional Loss - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167806 chr14:21167809 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_57128 0 0 2 RPS3 POSTAR2 ENCODE chr14:21167767-21167816
64251 chr17 4443075 4443075 1 - T A rs9905742 4443079 - 4443059 4443099 41 ACCGGCGGGAGCCAGCCCCCCAGCATGGGCAGGAAGAAGAG ACCGGCGGGAGCCAGCCCCCCAGCTTGGGCAGGAAGAAGAG < 41bp 0.784401800845398 0.476310144757108 0.3295764 0.3578245 prediction 0.568803601690796 Functional Loss - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4443079 chr17:4443075 nonsynonymous SNV 0.103 1 25 hm5C_associated_SNPs_57134 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003588 chr17:4443054-4443075
64251 chr3 128976673 128976673 1 + A T CESC 128976669 + 128976649 128976689 41 GCCATCGTCAATCTGCCAGGCTGCAGTGCCAAAGAGCTGGC GCCATCGTCAATCTGCCAGGCTGCTGTGCCAAAGAGCTGGC < 41bp 0.784388688545482 0.445717006606721 0.13341859 0.11906555 prediction 0.568777377090965 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128976669 chr3:128976673 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_57136 0 0 1 YBX3 POSTAR2 ENCODE chr3:128976670-128976702
64251 chr16 2570848 2570848 1 + G T SARC 2570845 + 2570825 2570865 41 GAGGAGCGGCGCGTGGCCGACGAGCGGCGGGACTGCGGGGG GAGGAGCGGCGCGTGGCCGACGATCGGCGGGACTGCGGGGG < 41bp 0.784377118877567 0.402721751342364 0.3373288 0.089218765 prediction 0.568754237755134 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2570845 chr16:2570848 nonsynonymous SNV 0.779 0 24 hm5C_associated_SNPs_57137 0 0 5 BUD13 POSTAR2 ENCODE chr16:2570819-2570883
64251 chr13 113439477 113439477 1 + G T HNSC 113439475 + 113439455 113439495 41 GGAGAAGAGAATTGGGTGGACAGCAGGACCATCTACGTGGG GGAGAAGAGAATTGGGTGGACATCAGGACCATCTACGTGGG < 41bp 0.784375433283058 0.453998084713082 0.7758014 0.45830607 prediction 0.568750866566115 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113439475 chr13:113439477 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_57138 0 0 2 DDX24 POSTAR2 ENCODE chr13:113439448-113439565
64251 chr3 183884310 183884310 1 + G T LUSC 183884307 + 183884287 183884327 41 GCGGGAGATTGTGCACAAACCGGGGTATGGATGGAATGGGG GCGGGAGATTGTGCACAAACCGGTGTATGGATGGAATGGGG < 41bp 0.899139339810035 0.614768152098316 0.9046476 0.8068907 prediction 0.568742375423437 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183884307 chr3:183884310 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_57140 0 0 4 DDX24 POSTAR2 ENCODE chr3:183884264-183884311
64251 chr20 57599558 57599558 1 + G T THCA 57599556 + 57599536 57599576 41 GCTGTCTGCGACATCCCGCCCCGGGGGCTGAGCATGGCCGC GCTGTCTGCGACATCCCGCCCCTGGGGCTGAGCATGGCCGC < 41bp 0.784364458074178 0.437288222058641 0.8705131 0.088718 prediction 0.568728916148357 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57599556 chr20:57599558 nonsynonymous SNV 0.027 2 23 hm5C_associated_SNPs_57142 0 0 1 RBM15 POSTAR2 ENCODE chr20:57599427-57599562
64251 chr1 212792891 212792891 1 + G T UCEC 212792889 + 212792869 212792909 41 AGATAAAAGAAGGAACATTGCAGAGCTAAGCAGTCGTGGTA AGATAAAAGAAGGAACATTGCATAGCTAAGCAGTCGTGGTA < 41bp 0.784350301342645 0.456374373719754 0.8859207 0.43041402 prediction 0.56870060268529 Functional Loss - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212792889 chr1:212792891 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_57145 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:212792862-212792900
64251 chr20 44563407 44563407 1 + A C rs576532506 44563403 + 44563383 44563423 41 CGGCAAAACGGGCGGTCGAGCAGAACGTGTAGCCGCGTCCC CGGCAAAACGGGCGGTCGAGCAGACCGTGTAGCCGCGTCCC < 41bp 0.823330883545536 0.538997886186777 0.3406559 0.20897141 prediction 0.568665994717519 Functional Loss - PCIF1 ENSG00000100982 UTR5 Human protein_coding chr20:44563403 chr20:44563407 . . 0 25 hm5C_associated_SNPs_57148 0 0 2 DDX3X POSTAR2 ENCODE chr20:44563350-44563439
64251 chr20 18448103 18448103 1 + G C rs182853828 18448102 + 18448082 18448122 41 CGGGTTCCCCGGCTTGCTACCGGGCTGCTCCGTGCATCTTT CGGGTTCCCCGGCTTGCTACCCGGCTGCTCCGTGCATCTTT < 41bp 0.784330761406513 0.493261686387925 0.93837345 0.5722405 prediction 0.568661522813027 Functional Loss - POLR3F ENSG00000132664 UTR5 Human protein_coding chr20:18448102 chr20:18448103 . . 0 22 hm5C_associated_SNPs_57149 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:18448099-18448128
64251 chr1 205242398 205242398 1 + G T rs114651262 205242395 + 205242375 205242415 41 GAAAAGGAGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGC GAAAAGGAGAGAGGAATCCCCTATAGCAGGGAAAGCAGTGC < 41bp 0.803608264710095 0.519282916694875 0.7753105 0.33788645 prediction 0.568650696030441 Functional Loss - TMCC2 ENSG00000133069 UTR3 Human protein_coding chr1:205242395 chr1:205242398 . . 0 24 hm5C_associated_SNPs_57150 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:205242383-205242434
64251 chr19 56180887 56180887 1 + G C LUSC 56180886 + 56180866 56180906 41 GGTGCAGATGGGCGGCCACCCGACTGAGGTCCTGTGCCTCA GGTGCAGATGGGCGGCCACCCCACTGAGGTCCTGTGCCTCA < 41bp 0.808685761681796 0.524413885629799 0.25354934 0.22853953 prediction 0.568543752103993 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56180886 chr19:56180887 synonymous SNV . 0 22 hm5C_associated_SNPs_57157 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:56180831-56180890
64251 chr4 59449 59449 1 + G T LUAD 59446 + 59426 59466 41 ACTACAGGAACCTGGTCTCCCTGGGTGAGGATAACTTCAAT ACTACAGGAACCTGGTCTCCCTGTGTGAGGATAACTTCAAT < 41bp 0.784270780356106 0.417194934799818 0.2295174 0.06710088 prediction 0.568541560712212 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59446 chr4:59449 nonsynonymous SNV 0.632 3 24 hm5C_associated_SNPs_57158 0 0 6 GEMIN5 POSTAR2 ENCODE chr4:59400-59451
64251 chr4 59448 59448 1 + G T LUSC 59446 + 59426 59466 41 ACTACAGGAACCTGGTCTCCCTGGGTGAGGATAACTTCAAT ACTACAGGAACCTGGTCTCCCTTGGTGAGGATAACTTCAAT < 41bp 0.784270780356106 0.466669273973133 0.2295174 0.0915319 prediction 0.568541560712212 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59446 chr4:59448 synonymous SNV . 0 23 hm5C_associated_SNPs_57159 0 0 6 GEMIN5 POSTAR2 ENCODE chr4:59400-59451
64251 chr2 10350612 10350612 1 + G T UCEC 10350609 + 10350589 10350629 41 TTATCTGGGTGGGAACTCACCAAGAATGCACAGAGGGCGCT TTATCTGGGTGGGAACTCACCAATAATGCACAGAGGGCGCT < 41bp 0.884991032336467 0.60073757114692 0.61998373 0.3820863 prediction 0.568506922379094 Functional Loss - C2orf48 ENSG00000163009 CDS Human lincRNA chr2:10350609 chr2:10350612 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_57163 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831621 chr2:10350600-10350620
64251 chr19 38774304 38774304 1 + G T KIRP 38774301 + 38774281 38774321 41 TCGAAGGTGGTGGGCAGATGCCGGGCCTCCATGCCTAGGTG TCGAAGGTGGTGGGCAGATGCCGTGCCTCCATGCCTAGGTG < 41bp 0.784157292325339 0.383773951065537 0.9144719 0.7412012 prediction 0.568314584650679 Functional Loss - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38774301 chr19:38774304 synonymous SNV . 0 24 hm5C_associated_SNPs_57171 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:38774260-38774340
64251 chr21 34922690 34922690 1 + G T ESCA 34922687 + 34922667 34922707 41 TGGCCTCAGCGATGGAGTTGCCGGGGCCACCTGCGACCTCC TGGCCTCAGCGATGGAGTTGCCGTGGCCACCTGCGACCTCC < 41bp 0.784142361901346 0.405673222541134 0.94610023 0.89949423 prediction 0.568284723802692 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922687 chr21:34922690 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57172 0 0 30 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34922290-34922710
64251 chr1 161480729 161480729 1 + G T UCEC 161480727 + 161480707 161480747 41 GTAGTGGCCTTGATCTACTGCAGGAAAAAGCGGATTTCAGG GTAGTGGCCTTGATCTACTGCATGAAAAAGCGGATTTCAGG < 41bp 0.784109885620183 0.450657574760221 0.5080596 0.05822915 prediction 0.568219771240366 Functional Loss - FCGR2A ENSG00000143226 CDS Human protein_coding chr1:161480727 chr1:161480729 nonsynonymous SNV 0.013 2 23 hm5C_associated_SNPs_57176 0 0 1 PRPF8 POSTAR2 ENCODE chr1:161480723-161480781
64251 chr19 9959825 9959825 1 + G C STAD 9959824 + 9959804 9959844 41 CTGCGGACGGGGGAGATGAGCGGGCCCGTGTTCACGGATTC CTGCGGACGGGGGAGATGAGCCGGCCCGTGTTCACGGATTC < 41bp 0.813261781043097 0.529179367652586 0.88504004 0.39376128 prediction 0.568164826781022 Functional Loss - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9959824 chr19:9959825 nonsynonymous SNV 0.977 4 22 hm5C_associated_SNPs_57180 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:9959789-9959833
64251 chr19 57905574 57905574 1 + G T UCEC 57905572 + 57905552 57905592 41 TCAGGGTCCCCTGGCGATGGCAGAAATGGACCCTACACAGG TCAGGGTCCCCTGGCGATGGCATAAATGGACCCTACACAGG < 41bp 0.85324431492477 0.569176877689343 0.28370285 0.17392665 prediction 0.568134874470855 Functional Loss - ZNF548 ENSG00000188785;ENSG00000268533;ENSG00000269533 CDS Human other chr19:57905572 chr19:57905574 stopgain 0.189 0 23 hm5C_associated_SNPs_57181 0 0 3 BUD13 POSTAR2 ENCODE chr19:57905504-57905592
64251 chr19 13084371 13084371 1 + G T UCEC 13084369 + 13084349 13084389 41 CGTGGTCCTGTGGTGTCTCACTGGCAGCTCAGCCTCCCGTC CGTGGTCCTGTGGTGTCTCACTTGCAGCTCAGCCTCCCGTC < 41bp 0.859786838169439 0.57572022159066 0.3147117 0.031792104 prediction 0.568133233157559 Functional Loss - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084369 chr19:13084371 nonsynonymous SNV 0.004 3 23 hm5C_associated_SNPs_57182 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:13084338-13084376
64251 chr10 116710901 116710901 1 + G T LGG 116710898 + 116710878 116710918 41 AATGTTGACCAGTATGTTGTCAGGGTCCAAGGTAAGAATAC AATGTTGACCAGTATGTTGTCAGTGTCCAAGGTAAGAATAC < 41bp 0.784064402746678 0.422688099270201 0.8971954 0.1622191 prediction 0.568128805493356 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116710898 chr10:116710901 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_57183 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:116710884-116710908
64251 chr5 23527798 23527798 1 + G T GBM 23527796 + 23527776 23527816 41 ACGTCTGCAGGGAGTGTGGGCGGGGCTTTAGCGATAGGTCA ACGTCTGCAGGGAGTGTGGGCGTGGCTTTAGCGATAGGTCA < 41bp 0.867852122793163 0.583799374855662 0.9151592 0.51558995 prediction 0.568105495875003 Functional Loss - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527796 chr5:23527798 synonymous SNV . 0 23 hm5C_associated_SNPs_57185 0 0 1 LIN28B POSTAR2 ENCODE chr5:23527758-23527827
64251 chr1 64011660 64011660 1 + G T LGG 64011658 + 64011638 64011678 41 GAAATCATTAGTCATCAGTACAGGATGCAAATAGCTCAGAG GAAATCATTAGTCATCAGTACATGATGCAAATAGCTCAGAG < 41bp 0.830214065716677 0.546164644908346 0.38498545 0.18945813 prediction 0.568098841616661 Functional Loss - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:64011658 chr1:64011660 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_57186 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:64011653-64011681
64251 chr15 89631738 89631738 1 + G T rs553893155 89631735 + 89631715 89631755 41 CCATGAGCGCCGCTGGCAGCCGGGGAGCTGCAGGAACCAGA CCATGAGCGCCGCTGGCAGCCGGTGAGCTGCAGGAACCAGA < 41bp 0.784043657873683 0.439048144620911 0.858034 0.27543584 prediction 0.568087315747366 Functional Loss - ABHD2 ENSG00000140526 UTR5 Human protein_coding chr15:89631735 chr15:89631738 . . 0 24 hm5C_associated_SNPs_57187 0 0 3 DDX3X POSTAR2 ENCODE chr15:89631691-89631793
64251 chr18 55103544 55103544 1 + G C PAAD 55103543 + 55103523 55103563 41 GCGGCAGCTTCACCCTCATGCGCGACGAGCGCGGGCTCCCG GCGGCAGCTTCACCCTCATGCCCGACGAGCGCGGGCTCCCG < 41bp 0.785021997945587 0.500996205393742 0.19456562 0.055528164 prediction 0.568051585103691 Functional Loss - ONECUT2 ENSG00000119547 CDS Human protein_coding chr18:55103543 chr18:55103544 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_57193 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr18:55103540-55103560
64251 chr1 55518445 55518445 1 + G T LUSC 55518442 + 55518422 55518462 41 CTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCAT CTCAACTGCCAAGGGAAGGGCACTGTTAGCGGCACCCTCAT < 41bp 0.784017965132415 0.389840774844485 0.4021845 0.1502094 prediction 0.568035930264831 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518442 chr1:55518445 synonymous SNV . 0 24 hm5C_associated_SNPs_57197 0 0 1 SF3B1 POSTAR2 ENCODE chr1:55518415-55518457
64251 chr1 45101249 45101249 1 + G T UCEC 45101246 + 45101226 45101266 41 GGAAAATGAAACGGAGGAAGCAAGATGAAGGGCAGGTATGT GGAAAATGAAACGGAGGAAGCAATATGAAGGGCAGGTATGT < 41bp 0.784009384521305 0.407289832095301 0.5471431 0.28266126 prediction 0.56801876904261 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101246 chr1:45101249 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_57198 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:45101249-45101250
64251 chr9 90343545 90343545 1 + G T DLBC 90343542 + 90343522 90343562 41 CTTTTAGTGCTACTGGTGCTCTTGAAGGACAGATGTTCCGG CTTTTAGTGCTACTGGTGCTCTTTAAGGACAGATGTTCCGG < 41bp 0.784003244671394 0.404383767374917 0.35266113 0.21361017 prediction 0.568006489342788 Functional Loss - CTSL ENSG00000135047 CDS Human protein_coding chr9:90343542 chr9:90343545 stopgain 0.671 1 24 hm5C_associated_SNPs_57199 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:90343507-90343601
64251 chr1 27677312 27677312 1 + G T HNSC 27677309 + 27677289 27677329 41 CCGTCCCGCAGGCCGAGCTTCAGGGCCGCGTGCTGAGCCTG CCGTCCCGCAGGCCGAGCTTCAGTGCCGCGTGCTGAGCCTG < 41bp 0.897515445748016 0.613534161810293 0.92922056 0.3059308 prediction 0.567962567875446 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27677309 chr1:27677312 nonsynonymous SNV 0.801 4 24 hm5C_associated_SNPs_57204 0 0 1 PPIG POSTAR2 ENCODE chr1:27677291-27677365
64251 chr8 22472959 22472959 1 + G T GBM 22472957 + 22472937 22472977 41 GGTGGCGCTTTGCCGAGTTTCAGTACCTGCAGCCGGGACCC GGTGGCGCTTTGCCGAGTTTCATTACCTGCAGCCGGGACCC < 41bp 0.783974421928702 0.435102560625683 0.85000575 0.51428443 prediction 0.567948843857403 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22472957 chr8:22472959 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_57205 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:22472955-22472974
64251 chr8 145135423 145135423 1 + G T GBM 145135421 + 145135401 145135441 41 GGGTGTTGGAGGCTGCTGCCCAGGCTGCCCGAGATGTGCAC GGGTGTTGGAGGCTGCTGCCCATGCTGCCCGAGATGTGCAC < 41bp 0.842058264697938 0.558105686592907 0.58262885 0.12053093 prediction 0.567905156210062 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135421 chr8:145135423 nonsynonymous SNV 0.992 0 23 hm5C_associated_SNPs_57210 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145135366-145135433
64251 chr16 72137022 72137022 1 + A C STAD 72137018 + 72136998 72137038 41 ATGAAGAGAAAGAGCGAAGCCAGCAGTGAATTTGCAAAGAA ATGAAGAGAAAGAGCGAAGCCAGCCGTGAATTTGCAAAGAA < 41bp 0.783941119589122 0.374114898610309 0.32070214 0.34455225 prediction 0.567882239178245 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72137018 chr16:72137022 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_57213 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:72136990-72137035
64251 chr13 108870850 108870850 1 + G T rs541742774 108870848 + 108870828 108870868 41 GGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCG GGGGGCCGGAAGTGGGGCCACATCTCGCAGCAGGAGCTCCG < 41bp 0.783939795919089 0.476044426386762 0.4725879 0.3613903 prediction 0.567879591838177 Functional Loss - ABHD13 ENSG00000139826 UTR5 Human protein_coding chr13:108870848 chr13:108870850 . . 0 23 hm5C_associated_SNPs_57214 0 0 1 DDX3X POSTAR2 ENCODE chr13:108870826-108870929
64251 chr2 234343445 234343445 1 + G T SARC 234343443 + 234343423 234343463 41 GTACAGCATGGACCACTTCTCAGGGATGCACAATTGGTACG GTACAGCATGGACCACTTCTCATGGATGCACAATTGGTACG < 41bp 0.872599018693536 0.588660849981097 0.95103943 0.91726017 prediction 0.567876337424879 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234343443 chr2:234343445 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57215 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:234343434-234343450
64251 chr3 44672589 44672589 1 + G T UCEC 44672587 + 44672567 44672607 41 TCAAGGATCAGGACACTCTCCAGAAGGTGGTGAGTGCCCCA TCAAGGATCAGGACACTCTCCATAAGGTGGTGAGTGCCCCA < 41bp 0.854822540337118 0.5708881816312 0.45780784 0.15982866 prediction 0.567868717411836 Functional Loss - ZNF197;ZNF660-ZNF197 ENSG00000186448 CDS Human protein_coding chr3:44672587 chr3:44672589 nonsynonymous SNV 0.028 2 23 hm5C_associated_SNPs_57216 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:44672568-44672590
64251 chr14 74390222 74390222 1 + A C UCEC 74390218 + 74390198 74390238 41 TGTCTTAACTGCAGTAAATCCACAAGAGGTAAAGTGGTCTC TGTCTTAACTGCAGTAAATCCACACGAGGTAAAGTGGTCTC < 41bp 0.78392918812334 0.385103536506454 0.4606021 0.3480547 prediction 0.567858376246681 Functional Loss - ZNF410 ENSG00000119725 CDS Human protein_coding chr14:74390218 chr14:74390222 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_57218 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:74390193-74390223
64251 chr1 41236331 41236331 1 + A T LIHC 41236327 + 41236307 41236347 41 AGCTCGAGACCCATAGGGAGCTGCATGCCCCTCTCCCAGGG AGCTCGAGACCCATAGGGAGCTGCTTGCCCCTCTCCCAGGG < 41bp 0.814763632521403 0.53087222170617 0.11806339 0.09904051 prediction 0.567782821630466 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41236327 chr1:41236331 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_57224 0 0 3 SF3B4 POSTAR2 ENCODE chr1:41236328-41236394
64251 chr2 26502085 26502085 1 + G C LUAD 26502084 + 26502064 26502104 41 CCGCTGCCTTTGCTGTTTCTCGGCTGGAACAGGATGAATAT CCGCTGCCTTTGCTGTTTCTCCGCTGGAACAGGATGAATAT < 41bp 0.783875876152501 0.474059146587588 0.92481416 0.34419838 prediction 0.567751752305001 Functional Loss - HADHB ENSG00000138029 CDS Human protein_coding chr2:26502084 chr2:26502085 nonsynonymous SNV 0.976 5 22 hm5C_associated_SNPs_57231 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:26502073-26502090
64251 chr9 91961836 91961836 1 + G T rs62638732 91961833 + 91961813 91961853 41 CCTTTCCAAAGAATGTGCATCAGGGGAGAGAGGCCGCCGCA CCTTTCCAAAGAATGTGCATCAGTGGAGAGAGGCCGCCGCA < 41bp 0.903296480776528 0.619441078691478 0.9302248 0.20448267 prediction 0.567710804170099 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91961833 chr9:91961836 nonsynonymous SNV 0.025 2 24 hm5C_associated_SNPs_57234 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:91961821-91961842
64251 chr8 38095663 38095663 1 + G T OV 38095660 + 38095640 38095680 41 GATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAG GATGATTGGGGTTCAACACCCACTGAGCAGGGTCGACCAAG < 41bp 0.783845800452806 0.406465669496804 0.45886272 0.346578 prediction 0.567691600905611 Functional Loss - DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095660 chr8:38095663 synonymous SNV . 0 24 hm5C_associated_SNPs_57237 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:38095650-38095663
64251 chr4 25931359 25931359 1 + G T rs148941272 25931356 + 25931336 25931376 41 TAAATATGAAGCAAGTCAAACTAGATGCATACACTTGTGTA TAAATATGAAGCAAGTCAAACTATATGCATACACTTGTGTA < 41bp 0.798492972978775 0.514656420430477 0.13882726 0.13103986 prediction 0.567673105096595 Functional Loss - SMIM20 ENSG00000250317 UTR3 Human protein_coding chr4:25931356 chr4:25931359 . . 0 24 hm5C_associated_SNPs_57241 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:25931339-25931434
64251 chr7 99045802 99045802 1 + G T LIHC 99045799 + 99045779 99045819 41 AAGACAGTTGTGTGCAAACACTGGCTGCGTGGCCTATGCAA AAGACAGTTGTGTGCAAACACTGTCTGCGTGGCCTATGCAA < 41bp 0.783824031518209 0.399457003661943 0.22948548 0.08365366 prediction 0.567648063036418 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99045799 chr7:99045802 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_57243 0 0 2 DDX24 POSTAR2 ENCODE chr7:99045743-99045807
64251 chr5 128442668 128442668 1 + G T LUAD 128442666 + 128442646 128442686 41 TGTGCATCCAACAAACTGCCCTGGAGCTAGTTGGCCGAGGA TGTGCATCCAACAAACTGCCCTTGAGCTAGTTGGCCGAGGA < 41bp 0.843151820634183 0.559335908673942 0.27699906 0.074124485 prediction 0.567631823920483 Functional Loss - ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128442666 chr5:128442668 synonymous SNV . 0 23 hm5C_associated_SNPs_57248 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:128442659-128442693
64251 chr14 105716665 105716665 1 + G T UCEC 105716663 + 105716643 105716683 41 GGACAGAAGGGTATTTATTGCAGGGCTGGGCCTGTATGGCT GGACAGAAGGGTATTTATTGCATGGCTGGGCCTGTATGGCT < 41bp 0.851791600815409 0.567976875287659 0.90735006 0.42887005 prediction 0.5676294510555 Functional Loss - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716663 chr14:105716665 nonsynonymous SNV 0.807 5 23 hm5C_associated_SNPs_57249 0 0 2 FUS POSTAR2 GSE43308,GSM1060383 chr14:105716660-105716680
64251 chr3 49017042 49017042 1 + G T UCEC 49017039 + 49017019 49017059 41 GCCCAGGCGAGGGAAGCCCTCAAGAAGTACTTATTCTACTT GCCCAGGCGAGGGAAGCCCTCAATAAGTACTTATTCTACTT < 41bp 0.89164094458693 0.607839718532007 0.63011974 0.12687224 prediction 0.567602452109846 Functional Loss - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49017039 chr3:49017042 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_57251 0 0 4 BUD13 POSTAR2 ENCODE chr3:49016994-49017066
64251 chr1 244218434 244218434 1 + G T LIHC 244218432 + 244218412 244218452 41 CCCTACACATGCACCCAGTGCGGCAAGAGCTTCCAGTACTC CCCTACACATGCACCCAGTGCGTCAAGAGCTTCCAGTACTC < 41bp 0.825240372327102 0.541440497779316 0.28810328 0.09345397 prediction 0.567599749095572 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218432 chr1:244218434 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57252 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:244218400-244218436
64251 chr18 46388901 46388901 1 + A C rs78853314 46388897 + 46388877 46388917 41 AGGAGCCCCGCCACCCTCCACGGGATGTGCACCCTCAGACC AGGAGCCCCGCCACCCTCCACGGGCTGTGCACCCTCAGACC < 41bp 0.840852750088776 0.557084363676548 0.6656533 0.27295083 prediction 0.567536772824454 Functional Loss - CTIF ENSG00000134030 UTR3 Human protein_coding chr18:46388897 chr18:46388901 . . 0 25 hm5C_associated_SNPs_57257 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:46388868-46388910
64251 chr21 30411466 30411466 1 + G T STAD 30411464 + 30411444 30411484 41 CACCGAAAGAACTCTTTTCTCAGGTCTGTAAAAAGTGAGTA CACCGAAAGAACTCTTTTCTCATGTCTGTAAAAAGTGAGTA < 41bp 0.783749965589882 0.464114157894359 0.8756014 0.20713156 prediction 0.567499931179764 Functional Loss - USP16 ENSG00000156256 CDS Human protein_coding chr21:30411464 chr21:30411466 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57258 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:30411408-30411487
64251 chr11 105948560 105948560 1 + G T SARC 105948558 + 105948538 105948578 41 TGCTGGCAGTGCGATCGATTCAGCCCGAGGAGAAGGAGCGC TGCTGGCAGTGCGATCGATTCATCCCGAGGAGAAGGAGCGC < 41bp 0.842713784233578 0.558966730908648 0.34468627 0.05547464 prediction 0.56749410664986 Functional Loss - AASDHPPT ENSG00000149313 CDS Human protein_coding chr11:105948558 chr11:105948560 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57260 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:105948554-105948578
64251 chr5 140021618 140021618 1 + A T LUAD 140021614 + 140021594 140021634 41 TCTTACCTCCTCACCTACCTCTCCAGTCACAGCTCAGACTT TCTTACCTCCTCACCTACCTCTCCTGTCACAGCTCAGACTT < 41bp 0.862100650390277 0.578362722622271 0.9514621 0.06306553 prediction 0.567475855536011 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140021614 chr5:140021618 nonsynonymous SNV 0.940 1 25 hm5C_associated_SNPs_57263 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:140021588-140021619
64251 chr5 169461502 169461502 1 + G T LUAD 169461500 + 169461480 169461520 41 TGGAGAAGCTGCTGGATTACCGGGGTGTGATGACAGATGAG TGGAGAAGCTGCTGGATTACCGTGGTGTGATGACAGATGAG < 41bp 0.797254908710657 0.513521869585355 0.9047262 0.8151694 prediction 0.567466078250604 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169461500 chr5:169461502 synonymous SNV . 0 23 hm5C_associated_SNPs_57264 0 0 3 FMR1 POSTAR2 ENCODE chr5:169461450-169461530
64251 chr6 13615976 13615976 1 + G C LUAD 13615975 + 13615955 13615995 41 TCCTGAAGGAGAAGAGGAAGCGACGCGAGGAGCTGTTCATC TCCTGAAGGAGAAGAGGAAGCCACGCGAGGAGCTGTTCATC < 41bp 0.81951228336901 0.535790716944924 0.6069412 0.5715226 prediction 0.567443132848172 Functional Loss - NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615975 chr6:13615976 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_57265 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221664 chr6:13615960-13615980
64251 chr19 19166730 19166730 1 + G T LUSC 19166728 + 19166708 19166748 41 AAGGCACACCCGCAGAAGGCCGGCGTGCAGGTGGGCAGGGC AAGGCACACCCGCAGAAGGCCGTCGTGCAGGTGGGCAGGGC < 41bp 0.848467926487026 0.564762709156894 0.43672118 0.19377458 prediction 0.567410434660264 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166728 chr19:19166730 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_57269 0 0 2 PRPF8 POSTAR2 ENCODE chr19:19166681-19166803
64251 chr11 74717042 74717042 1 + G T LUAD 74717040 + 74717020 74717060 41 CTGACCATGGTGAAGGCTTTCAGAGACTGGCCCTGAGTCGA CTGACCATGGTGAAGGCTTTCATAGACTGGCCCTGAGTCGA < 41bp 0.783702979660524 0.441292779119259 0.8689166 0.3252266 prediction 0.567405959321049 Functional Loss - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74717040 chr11:74717042 nonsynonymous SNV 0.630 2 23 hm5C_associated_SNPs_57270 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:74717015-74717045
64251 chr19 52090454 52090454 1 + G T SARC 52090451 + 52090431 52090471 41 GAATGTGGGGGGAGCTTCACCCAGAAGTCACACCTCTTTGC GAATGTGGGGGGAGCTTCACCCATAAGTCACACCTCTTTGC < 41bp 0.783691705130698 0.401799877514193 0.23106274 0.04281223 prediction 0.567383410261397 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090451 chr19:52090454 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_57271 0 0 2 SAFB2 POSTAR2 ENCODE chr19:52090422-52090481
64251 chr12 50855098 50855098 1 + G T SARC 50855096 + 50855076 50855116 41 AGAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGAC AGAAGGAGACTTCCACTTTGCATGTGGAACAGAATGGGGAC < 41bp 0.783680156927192 0.486968610534623 0.8398726 0.3482015 prediction 0.567360313854383 Functional Loss - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50855096 chr12:50855098 nonsynonymous SNV 0.908 0 23 hm5C_associated_SNPs_57273 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr12:50855080-50855100
64251 chr6 151672977 151672977 1 + G T UCEC 151672974 + 151672954 151672994 41 CCTTAGCTGGGGTAAAATCACAGGAGATGGTGATGGAACAG CCTTAGCTGGGGTAAAATCACAGTAGATGGTGATGGAACAG < 41bp 0.87976114826082 0.596083879539304 0.9071305 0.45828483 prediction 0.567354537443032 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151672974 chr6:151672977 stopgain 0.000 0 24 hm5C_associated_SNPs_57274 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:151672959-151672989
64251 chr14 59789892 59789892 1 + G T rs17096074 59789890 + 59789870 59789910 41 CCGGGGGCCACAAGAAGGTTCTGCAGGCCATGCTGCACTAC CCGGGGGCCACAAGAAGGTTCTTCAGGCCATGCTGCACTAC < 41bp 0.7836763425349 0.462065863961369 0.421144 0.39244646 prediction 0.5673526850698 Functional Loss - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59789890 chr14:59789892 synonymous SNV . 0 23 hm5C_associated_SNPs_57275 0 0 2 FXR2 POSTAR2 ENCODE chr14:59789829-59789902
64251 chr13 49649449 49649449 1 + G T UCEC 49649447 + 49649427 49649467 41 TATTCTGGTACAAGTTAACCCAGGAGAAGCATTTACAATAA TATTCTGGTACAAGTTAACCCATGAGAAGCATTTACAATAA < 41bp 0.783637290895522 0.484161361997964 0.4025947 0.016692936 prediction 0.567274581791044 Functional Loss - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49649447 chr13:49649449 stopgain 0.960 1 23 hm5C_associated_SNPs_57281 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:49649440-49649480
64251 chr19 45909731 45909731 1 + G T rs571097071 45909728 + 45909708 45909748 41 TACAGCGAATCAGCGGCTTTCGGGAATACATTTTTCGGAAA TACAGCGAATCAGCGGCTTTCGGTAATACATTTTTCGGAAA < 41bp 0.840206504705631 0.556611463946285 0.94865656 0.36899173 prediction 0.567190081518692 Functional Loss - CD3EAP ENSG00000117877 UTR5 Human protein_coding chr19:45909728 chr19:45909731 . . 0 24 hm5C_associated_SNPs_57289 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45909714-45909744
64251 chr1 41284227 41284227 1 + G T LUAD 41284224 + 41284204 41284244 41 CCGTCATCGCCGCGGGTACCCAGGGCAACATCTTCGCCACG CCGTCATCGCCGCGGGTACCCAGTGCAACATCTTCGCCACG < 41bp 0.906013949772471 0.622426039755848 0.9398253 0.5646481 prediction 0.567175820033247 Functional Loss - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41284224 chr1:41284227 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_57290 0 0 1 METAP2 POSTAR2 ENCODE chr1:41284166-41284256
64251 chr1 204380177 204380177 1 - C A UCEC 204380179 - 204380159 204380199 41 AACCAGCCGCCCCCACAGCGCAGAAATCTTTGAGTTCGCTG AACCAGCCGCCCCCACAGCGCATAAATCTTTGAGTTCGCTG < 41bp 0.783574863799498 0.449296190659244 0.068831444 0.045045137 prediction 0.567149727598996 Functional Loss - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204380179 chr1:204380177 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_57294 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:204380160-204380200
64251 chr2 118579625 118579625 1 + G T LUAD 118579623 + 118579603 118579643 41 TGGCCACACCAGGCCGTCTGCTGGACCATATGCAGGTAAGA TGGCCACACCAGGCCGTCTGCTTGACCATATGCAGGTAAGA < 41bp 0.7835588876835 0.47403775311906 0.25362894 0.23443815 prediction 0.567117775367 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579623 chr2:118579625 synonymous SNV . 0 23 hm5C_associated_SNPs_57297 0 0 12 FASTKD2 POSTAR2 ENCODE chr2:118579565-118579634
64251 chr2 118579626 118579626 1 + G T LUAD 118579623 + 118579603 118579643 41 TGGCCACACCAGGCCGTCTGCTGGACCATATGCAGGTAAGA TGGCCACACCAGGCCGTCTGCTGTACCATATGCAGGTAAGA < 41bp 0.7835588876835 0.431149964858999 0.25362894 0.1771389 prediction 0.567117775367 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579623 chr2:118579626 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_57298 0 0 12 FASTKD2 POSTAR2 ENCODE chr2:118579565-118579634
64251 chrX 15833946 15833946 1 + A T LUSC 15833942 + 15833922 15833962 41 ACAGCGAGGAAGAAACCTACCAACAGTTCCTAGACTTCTAT ACAGCGAGGAAGAAACCTACCAACTGTTCCTAGACTTCTAT < 41bp 0.783556886957043 0.461611137882971 0.20738065 0.65846896 prediction 0.567113773914087 Functional Loss - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15833942 chrX:15833946 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_57299 0 0 1 ZNF622 POSTAR2 ENCODE chrX:15833878-15833947
64251 chr4 56225592 56225592 1 + G T STAD 56225589 + 56225569 56225609 41 GCCTTACTCAATCTCTGTTCCTGGGAGCACCTTTTCCAAGC GCCTTACTCAATCTCTGTTCCTGTGAGCACCTTTTCCAAGC < 41bp 0.895628044772064 0.612078918656389 0.80056405 0.0683831 prediction 0.567098252231351 Functional Loss - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56225589 chr4:56225592 stopgain 0.987 0 24 hm5C_associated_SNPs_57302 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:56225568-56225606
64251 chr8 67342089 67342089 1 + G T KIRC 67342086 + 67342066 67342106 41 CGCTTTCAGGAGCGCCTCCCCAAGGAGAAGGTGCCCCGGGG CGCTTTCAGGAGCGCCTCCCCAATGAGAAGGTGCCCCGGGG < 41bp 0.900617486221247 0.617082751158758 0.9150413 0.58683115 prediction 0.567069470124978 Functional Loss - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67342086 chr8:67342089 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_57304 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:67342080-67342100
64251 chr14 54996780 54996780 1 + G T SARC 54996777 + 54996757 54996797 41 TTTTTTACAGCTGGCATAACCTTGACAACAGATTGCCTTGA TTTTTTACAGCTGGCATAACCTTTACAACAGATTGCCTTGA < 41bp 0.783528882384626 0.416636989439379 0.08869627 0.048035562 prediction 0.567057764769253 Functional Loss - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:54996777 chr14:54996780 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_57307 0 0 1 U2AF2 POSTAR2 ENCODE chr14:54996745-54996822
64251 chr16 2121840 2121840 1 + G T PRAD 2121838 + 2121818 2121858 41 CGGCCCCCTTTCTCCTCCCACAGGGCCTCCTGGCCCGGCGC CGGCCCCCTTTCTCCTCCCACATGGCCTCCTGGCCCGGCGC < 41bp 0.783520587863939 0.433094062636117 0.93344337 0.8180927 prediction 0.567041175727878 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2121838 chr16:2121840 nonsynonymous SNV 0.014 5 23 hm5C_associated_SNPs_57310 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:2121820-2121840
64251 chrX 7811944 7811944 1 + G T UCEC 7811941 + 7811921 7811961 41 AACCACTGAGTCAGGAGAGCCAGGTGGAGGAACCACTGAGT AACCACTGAGTCAGGAGAGCCAGTTGGAGGAACCACTGAGT < 41bp 0.783516565507408 0.398548146121049 0.90661454 0.5875968 prediction 0.567033131014816 Functional Loss - VCX ENSG00000182583 CDS Human protein_coding chrX:7811941 chrX:7811944 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_57311 0 0 1 AARS POSTAR2 ENCODE chrX:7811913-7811944
64251 chr16 27367165 27367165 1 + G C HNSC 27367161 + 27367141 27367181 41 CCTTCGAGCAGCACCTCCTGCTGGGCGTCAGCGTTTCCTGC CCTTCGAGCAGCACCTCCTGCTGGCCGTCAGCGTTTCCTGC < 41bp 0.783498954032806 0.494551869351607 0.25481546 0.23305055 prediction 0.566997908065612 Functional Loss - IL4R ENSG00000077238 CDS Human protein_coding chr16:27367161 chr16:27367165 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_57313 0 0 1 U2AF2 POSTAR2 ENCODE chr16:27367117-27367177
64251 chr2 73471795 73471795 1 + G T KIRP 73471793 + 73471773 73471813 41 TGATGATGCTCGATGATTTGCTGCAGCTTAAAATGATTGGA TGATGATGCTCGATGATTTGCTTCAGCTTAAAATGATTGGA < 41bp 0.78348678955298 0.469119483864048 0.035550594 0.04749757 prediction 0.56697357910596 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471793 chr2:73471795 synonymous SNV . 0 23 hm5C_associated_SNPs_57314 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr2:73471700-73471801
64251 chr22 50962186 50962186 1 - C A ACC 50962189 - 50962169 50962209 41 CAGGCCCCAAGGATGAGGACCAGGACTACATCGTGGACCAC CAGGCCCCAAGGATGAGGACCAGTACTACATCGTGGACCAC < 41bp 0.78345394280336 0.407179286599936 0.5990324 0.84647894 prediction 0.566907885606719 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962189 chr22:50962186 nonsynonymous SNV 0.981 5 24 hm5C_associated_SNPs_57317 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50962127-50962198
64251 chr7 73790803 73790803 1 + A T LUAD 73790799 + 73790779 73790819 41 AGGCCCTGCGAGAGAAGCTGCAGGAGGCCCAGGAGGAGCTG AGGCCCTGCGAGAGAAGCTGCAGGTGGCCCAGGAGGAGCTG < 41bp 0.826190190296198 0.54274790633353 0.9129901 0.90842986 prediction 0.566884567925336 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790799 chr7:73790803 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_57319 0 0 3 GRWD1 POSTAR2 ENCODE chr7:73790719-73790818
64251 chr2 37473261 37473261 1 + C T CESC 37473259 + 37473239 37473279 41 TGTTATCATCGAGGAACTTTCTCAACGCATTGCATTAACTG TGTTATCATCGAGGAACTTTCTTAACGCATTGCATTAACTG < 41bp 0.783696202904319 0.500259870390433 0.12303713 0.09318733 prediction 0.566872665027773 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37473259 chr2:37473261 stopgain 0.848 0 23 hm5C_associated_SNPs_57322 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37473219-37473267
64251 chr1 15978378 15978378 1 + G T BRCA 15978376 + 15978356 15978396 41 AGCAGAAGCCCTTCAAAAATCAGCAGAGGATGCAGGTATTT AGCAGAAGCCCTTCAAAAATCATCAGAGGATGCAGGTATTT < 41bp 0.838144136406237 0.554713148893498 0.5112957 0.3051733 prediction 0.566861975025477 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978376 chr1:15978378 nonsynonymous SNV 0.607 0 23 hm5C_associated_SNPs_57323 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:15978363-15978378
64251 chr3 127379283 127379283 1 + G T UCEC 127379280 + 127379260 127379300 41 TTGAAGACACCAGCCAGGCTCAAGAGCTGCCAAACCTCCCC TTGAAGACACCAGCCAGGCTCAATAGCTGCCAAACCTCCCC < 41bp 0.783421300282217 0.401798444750778 0.82388633 0.044445217 prediction 0.566842600564434 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379280 chr3:127379283 stopgain 0.016 0 24 hm5C_associated_SNPs_57326 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:127379272-127379317
64251 chr1 156261491 156261491 1 + G C rs3795728 156261490 + 156261470 156261510 41 TTCGCCCCCAGGCCTAGGACCGCGGTGGGTGGAACCCTGCT TTCGCCCCCAGGCCTAGGACCCCGGTGGGTGGAACCCTGCT < 41bp 0.783387794167283 0.486296288571876 0.6848141 0.2555702 prediction 0.566775588334566 Functional Loss - TMEM79 ENSG00000163472 UTR3 Human protein_coding chr1:156261490 chr1:156261491 . . 0 22 hm5C_associated_SNPs_57333 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:156261473-156261519
64251 chr8 48878870 48878870 1 + G T LUAD 48878868 + 48878848 48878888 41 ACGACCCGGGTGGAGATGGACCGCGGCCGCATTGCAGAGCC ACGACCCGGGTGGAGATGGACCTCGGCCGCATTGCAGAGCC < 41bp 0.783386602116201 0.431654281215491 0.78408563 0.44267532 prediction 0.566773204232403 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878868 chr8:48878870 nonsynonymous SNV 0.148 4 23 hm5C_associated_SNPs_57334 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48878846-48878882
64251 chr11 126126507 126126507 1 + G T UCEC 126126504 + 126126484 126126524 41 AAAACAAGTCATTTCTTTTCCTGGGCTGTGGCTGGACTGTG AAAACAAGTCATTTCTTTTCCTGTGCTGTGGCTGGACTGTG < 41bp 0.783382165083124 0.414144523954433 0.31846344 0.18966573 prediction 0.566764330166249 Functional Loss - FAM118B ENSG00000197798 CDS Human protein_coding chr11:126126504 chr11:126126507 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_57335 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:126126491-126126517
64251 chr5 154393912 154393912 1 + G T GBM 154393909 + 154393889 154393929 41 AGAAAGCTCAAATAAATATACGGGAGGATCCTAAGGAAGGC AGAAAGCTCAAATAAATATACGGTAGGATCCTAAGGAAGGC < 41bp 0.888463841243734 0.605093830837018 0.33042866 0.055481553 prediction 0.566740020813431 Functional Loss - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154393909 chr5:154393912 stopgain 0.836 0 24 hm5C_associated_SNPs_57337 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154393900-154393920
64251 chr10 126673377 126673377 1 + G T SARC 126673375 + 126673355 126673395 41 GAACAGCAAGAAAAACTGCTCAGGGAGTGGCTGGACTGCTG GAACAGCAAGAAAAACTGCTCATGGAGTGGCTGGACTGCTG < 41bp 0.840651554139763 0.557287584095925 0.9319116 0.8716508 prediction 0.566727940087677 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126673375 chr10:126673377 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57338 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr10:126673360-126673400
64251 chr1 25166473 25166473 1 + G T LUSC 25166470 + 25166450 25166490 41 AGTTTTCTACACGTAAATTTCTGGATGGCAATGAAATGACA AGTTTTCTACACGTAAATTTCTGTATGGCAATGAAATGACA < 41bp 0.873638165558821 0.590287677534993 0.6982905 0.34273213 prediction 0.566700976047655 Functional Loss - CLIC4 ENSG00000169504 CDS Human protein_coding chr1:25166470 chr1:25166473 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_57341 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:25166428-25166482
64251 chr20 34526625 34526625 1 + G T LUAD 34526623 + 34526603 34526643 41 TTTGTCCTCTCAACAGAAGCCGGGAGCATCCTGATCTGCCG TTTGTCCTCTCAACAGAAGCCGTGAGCATCCTGATCTGCCG < 41bp 0.860002479884817 0.576657032189356 0.7523564 0.20204201 prediction 0.566690895390922 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526623 chr20:34526625 synonymous SNV . 0 23 hm5C_associated_SNPs_57344 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr20:34526620-34526640
64251 chr9 96435887 96435887 1 + G T UCEC 96435885 + 96435865 96435905 41 AGCCAGCCCCCGGCCTCCCCCAGCACACAGGAAGCCATTCA AGCCAGCCCCCGGCCTCCCCCATCACACAGGAAGCCATTCA < 41bp 0.783332145586849 0.442971740150865 0.274647 0.061259568 prediction 0.566664291173697 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96435885 chr9:96435887 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_57346 0 0 2 BUD13 POSTAR2 ENCODE chr9:96435861-96435893
64251 chr3 193855934 193855934 1 + G T SARC 193855932 + 193855912 193855952 41 ATCCCCGTCTACACCAGCAACAGCGGCACCTCCGTGGGCCC ATCCCCGTCTACACCAGCAACATCGGCACCTCCGTGGGCCC < 41bp 0.78332039381446 0.44982790822565 0.87596667 0.29577968 prediction 0.56664078762892 Functional Loss - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855932 chr3:193855934 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_57348 0 0 2 FMR1 POSTAR2 ENCODE chr3:193855895-193855973
64251 chr3 50679165 50679165 1 + G T LUAD 50679162 + 50679142 50679182 41 GAAGGTGGTGAGTTGTTCAGCAGGATTCAGGAGCGTGGCGA GAAGGTGGTGAGTTGTTCAGCAGTATTCAGGAGCGTGGCGA < 41bp 0.898886535809522 0.615597306859977 0.8374597 0.2295205 prediction 0.56657845789909 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50679162 chr3:50679165 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_57351 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:50679160-50679172
64251 chr3 61734586 61734586 1 + G T UCEC 61734583 + 61734563 61734603 41 GGCTACGTTGGGGCCCTGCACGAGAATAGACACGGCAGCGC GGCTACGTTGGGGCCCTGCACGATAATAGACACGGCAGCGC < 41bp 0.85413204976314 0.570842987029112 0.69127953 0.44768 prediction 0.566578125468055 Functional Loss - PTPRG ENSG00000144724 CDS Human protein_coding chr3:61734583 chr3:61734586 nonsynonymous SNV 0.926 0 24 hm5C_associated_SNPs_57352 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:61734564-61734586
64251 chr17 79674393 79674393 1 + G T rs527875908 79674391 + 79674371 79674411 41 GAGCCGTTTGGGAGAATTGCCTGCGCCACGCAGCGGGGCCG GAGCCGTTTGGGAGAATTGCCTTCGCCACGCAGCGGGGCCG < 41bp 0.823117508497895 0.539865062169905 0.50489974 0.37098086 prediction 0.566504892655979 Functional Loss - MRPL12 ENSG00000262814 UTR3 Human protein_coding chr17:79674391 chr17:79674393 . . 0 23 hm5C_associated_SNPs_57354 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr17:79674358-79674395
64251 chr19 6836567 6836567 1 + G T UCEC 6836565 + 6836545 6836585 41 TCACGAAGGCTGAGGCTGAACAGAACTGGTGGGAGGTACAG TCACGAAGGCTGAGGCTGAACATAACTGGTGGGAGGTACAG < 41bp 0.783246879929546 0.447264017942597 0.34691143 0.22594473 prediction 0.566493759859091 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6836565 chr19:6836567 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_57355 0 0 1 ZNF622 POSTAR2 ENCODE chr19:6836514-6836580
64251 chr16 19056336 19056336 1 + G C rs185192206 19056332 + 19056312 19056352 41 AAACTCTACCCGGTGAGTTGCGGGGCGGGGGCGTTCGGCTG AAACTCTACCCGGTGAGTTGCGGGCCGGGGGCGTTCGGCTG < 41bp 0.797602890861498 0.514376809033896 0.9288379 0.82931775 prediction 0.566452163655204 Functional Loss - TMC7 ENSG00000170537 intronic Human protein_coding chr16:19056332 chr16:19056336 . . 0 25 hm5C_associated_SNPs_57361 0 0 1 PRPF8 POSTAR2 ENCODE chr16:19056313-19056357
64251 chr10 60936703 60936703 1 + G T HNSC 60936701 + 60936681 60936721 41 ACCTCAGCCTGGAGGCCATTCAGCTGTGCGACCGGGACGGT ACCTCAGCCTGGAGGCCATTCATCTGTGCGACCGGGACGGT < 41bp 0.783225587652102 0.498347845326451 0.30018044 0.12582281 prediction 0.566451175304204 Functional Loss - PHYHIPL ENSG00000165443 CDS Human protein_coding chr10:60936701 chr10:60936703 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_57362 0 0 1 XRN2 POSTAR2 ENCODE chr10:60936702-60936800
64251 chr19 18499285 18499285 1 + A C LUSC 18499281 + 18499261 18499301 41 CAAGACCCCAGGCGCCCGCGCTGCACCTGCGACTGTCGCCG CAAGACCCCAGGCGCCCGCGCTGCCCCTGCGACTGTCGCCG < 41bp 0.783206426215688 0.392251896898506 0.22791582 0.27712816 prediction 0.566412852431377 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499281 chr19:18499285 nonsynonymous SNV 0.034 0 25 hm5C_associated_SNPs_57365 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:18499246-18499295
64251 chr12 56629383 56629383 1 + G T LGG 56629381 + 56629361 56629401 41 CGCAGGACCTGGCGGACTACCAGAGAAGGACCTGGGCCCGG CGCAGGACCTGGCGGACTACCATAGAAGGACCTGGGCCCGG < 41bp 0.874126548057738 0.590930817123941 0.8919127 0.4401911 prediction 0.566391461867594 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56629381 chr12:56629383 stopgain 0.908 0 23 hm5C_associated_SNPs_57367 0 0 5 BUD13 POSTAR2 ENCODE chr12:56629275-56629394
64251 chr19 17873608 17873608 1 + G T SARC 17873606 + 17873586 17873626 41 GGCTTTGAGGTCCTGTACCACAGCGTGAAGCAGGGGCCCAT GGCTTTGAGGTCCTGTACCACATCGTGAAGCAGGGGCCCAT < 41bp 0.783187593106558 0.449865139638989 0.40235037 0.037634373 prediction 0.566375186213116 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17873606 chr19:17873608 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_57368 0 0 5 DDX24 POSTAR2 ENCODE chr19:17873567-17873632
64251 chr2 64780152 64780152 1 + G T COAD 64780149 + 64780129 64780169 41 ATCAGAAGAATGTCAATTGGCAAGAAAATCTAGTGGAACAG ATCAGAAGAATGTCAATTGGCAATAAAATCTAGTGGAACAG < 41bp 0.845331293185965 0.562169428005291 0.39318877 0.2067393 prediction 0.566323730361348 Functional Loss - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64780149 chr2:64780152 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_57372 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:64780136-64780161
64251 chr19 11107011 11107011 1 + G T LGG 11107008 + 11106988 11107028 41 ACGGAGCTGGTGCGGCAGCACAAGGCTGCCCAGGTCGCCAA ACGGAGCTGGTGCGGCAGCACAATGCTGCCCAGGTCGCCAA < 41bp 0.783154657557678 0.415198283977913 0.87465096 0.36729968 prediction 0.566309315115357 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11107008 chr19:11107011 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_57373 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:11107005-11107029
64251 chr17 61893018 61893018 1 + G T rs115503884 61893016 + 61892996 61893036 41 GCTACAGGGAGCGGCCTGGCCTGGGCTCTGAGAACATGGTG GCTACAGGGAGCGGCCTGGCCTTGGCTCTGAGAACATGGTG < 41bp 0.860671596965689 0.577531548556316 0.4059438 0.17238438 prediction 0.566280096818745 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61893016 chr17:61893018 synonymous SNV . 0 23 hm5C_associated_SNPs_57379 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:61892974-61893027
64251 chr10 103920683 103920683 1 + C T BRCA 103920681 + 103920661 103920701 41 AACAGTTCTTCTTCTGATGACTCCAGTGAGGAAGAGGAAGA AACAGTTCTTCTTCTGATGACTTCAGTGAGGAAGAGGAAGA < 41bp 0.78313096134129 0.493779179950789 0.92543304 0.12505195 prediction 0.566261922682581 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920681 chr10:103920683 nonsynonymous SNV 0.906 3 23 hm5C_associated_SNPs_57380 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:103920639-103920711
64251 chr22 17083060 17083060 1 + G T LUSC 17083057 + 17083037 17083077 41 CAGCCGCAGACAAAAGACCTCGGGGCCGGCCTCGCAAGGCG CAGCCGCAGACAAAAGACCTCGGTGCCGGCCTCGCAAGGCG < 41bp 0.871501660995901 0.588385712578802 0.90237904 0.64695585 prediction 0.566231896834199 Functional Loss - TPTEP1 ENSG00000100181 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17083057 chr22:17083060 . . 0 24 hm5C_associated_SNPs_57382 0 0 1 IGF2BP1 POSTAR2 ENCODE chr22:17083051-17083107
64251 chr1 26584111 26584111 1 + C T LUSC 26584109 + 26584089 26584129 41 TTCAGAATGGAGCCATCTGCCACCATCCTGCTGCTTTTGGT TTCAGAATGGAGCCATCTGCCATCATCCTGCTGCTTTTGGT < 41bp 0.783113575187114 0.498790128056798 0.12264919 0.10903263 prediction 0.566227150374229 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26584109 chr1:26584111 synonymous SNV . 0 23 hm5C_associated_SNPs_57383 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:26584093-26584118
64251 chr11 7669672 7669672 1 + G T SARC 7669670 + 7669650 7669690 41 CAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCT CAGAGCGTGTGTGTGCATGGCTTGAGGACTTTGGCCTGGCT < 41bp 0.78307688667442 0.459955141115469 0.44002283 0.16870156 prediction 0.566153773348839 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7669670 chr11:7669672 synonymous SNV . 0 23 hm5C_associated_SNPs_57391 0 0 1 PPIG POSTAR2 ENCODE chr11:7669623-7669690
64251 chr1 93594941 93594941 1 + G T LUSC 93594939 + 93594919 93594959 41 TTTCAAAGCAGAGAAAGAACCTGAAGGAACATCTCATGAAT TTTCAAAGCAGAGAAAGAACCTTAAGGAACATCTCATGAAT < 41bp 0.818738264951066 0.53568453772751 0.14701286 0.089206845 prediction 0.566107454447113 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93594939 chr1:93594941 stopgain 1.000 1 23 hm5C_associated_SNPs_57394 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93594928-93594956
64251 chr19 4930801 4930801 1 + G T LUAD 4930798 + 4930778 4930818 41 GGCGCAGGTGGTCAGGGTGACGCGGAAGGCCCCCTCCCGGG GGCGCAGGTGGTCAGGGTGACGCTGAAGGCCCCCTCCCGGG < 41bp 0.900712091421367 0.617679227240562 0.9500668 0.8786433 prediction 0.56606572836161 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4930798 chr19:4930801 . 0.002 0 24 hm5C_associated_SNPs_57397 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr19:4930781-4930819
64251 chr19 6744953 6744953 1 + G C LUSC 6744952 + 6744932 6744972 41 CGGATGGACGGCCTGAACTCCGAGGCCCGGGTCGCAGCCGC CGGATGGACGGCCTGAACTCCCAGGCCCGGGTCGCAGCCGC < 41bp 0.783027628361017 0.478500530891197 0.914397 0.8772505 prediction 0.566055256722035 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744952 chr19:6744953 nonsynonymous SNV 0.310 3 22 hm5C_associated_SNPs_57398 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6744914-6744975
64251 chr11 74545772 74545772 1 + G T PAAD 74545770 + 74545750 74545790 41 AGAGCTGTAGTGACACAGCCCAGGAAAGAGCGAAGAGCAGA AGAGCTGTAGTGACACAGCCCATGAAAGAGCGAAGAGCAGA < 41bp 0.782990710217166 0.454160554260095 0.10940176 0.018292755 prediction 0.565981420434332 Functional Loss - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74545770 chr11:74545772 nonsynonymous SNV 0.852 3 23 hm5C_associated_SNPs_57403 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:74545756-74545774
64251 chr19 12858032 12858032 1 + G T SARC 12858029 + 12858009 12858049 41 AGATGTGCAACATGCTGGGCCTGGGGGACATGAACGCAGAC AGATGTGCAACATGCTGGGCCTGTGGGACATGAACGCAGAC < 41bp 0.782957636428153 0.38759405846395 0.22558048 0.030889988 prediction 0.565915272856307 Functional Loss - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858029 chr19:12858032 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_57407 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:12858022-12858046
64251 chr6 80816585 80816585 1 + G T LUSC 80816582 + 80816562 80816602 41 TGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAG TGGCTCATTTTACTTTCCAGCCATATCCGGAGCCCCGGGAG < 41bp 0.782957265955848 0.420303450982106 0.38566124 0.22978154 prediction 0.565914531911695 Functional Loss - BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80816582 chr6:80816585 nonsynonymous SNV 0.080 2 24 hm5C_associated_SNPs_57408 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:80816554-80816585
64251 chr9 138395910 138395910 1 + G T LGG 138395908 + 138395888 138395928 41 TTGAGGCTCTCTATCGCCTGCAGGGCCAGAAGGAGCCCGGG TTGAGGCTCTCTATCGCCTGCATGGCCAGAAGGAGCCCGGG < 41bp 0.862299184632571 0.579385544157179 0.8240422 0.17592728 prediction 0.565827280950785 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395908 chr9:138395910 nonsynonymous SNV 0.018 3 23 hm5C_associated_SNPs_57415 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:138395880-138395910
64251 chr19 11101907 11101907 1 + A C LIHC 11101903 + 11101883 11101923 41 AATGCTAAGGCCTACAAGCGCAGCAAGCGCCAGTCCCTGCG AATGCTAAGGCCTACAAGCGCAGCCAGCGCCAGTCCCTGCG < 41bp 0.782857414664292 0.392868517574377 0.8532971 0.78673756 prediction 0.565714829328584 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11101903 chr19:11101907 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_57425 0 0 1 TRA2A POSTAR2 ENCODE chr19:11101903-11101959
64251 chr19 17393504 17393504 1 + G C rs1864113 17393503 + 17393483 17393523 41 GCCGCTGCATGTGGCCGCCGCGTGGGGCTGCCGCCGCGGCC GCCGCTGCATGTGGCCGCCGCCTGGGGCTGCCGCCGCGGCC < 41bp 0.782812702675856 0.474026800553281 0.8792811 0.8605262 prediction 0.565625405351712 Functional Loss - ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17393503 chr19:17393504 synonymous SNV . 0 22 hm5C_associated_SNPs_57429 0 0 1 PPIG POSTAR2 ENCODE chr19:17393488-17393572
64251 chr7 36450230 36450230 1 + C T ACC 36450228 + 36450208 36450248 41 CCACAGAACCCCCATTATTACTCCAAATACAAAGGCCATCC CCACAGAACCCCCATTATTACTTCAAATACAAAGGCCATCC < 41bp 0.801994733573482 0.519200512903662 0.9478712 0.12623766 prediction 0.56558844133964 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36450228 chr7:36450230 nonsynonymous SNV 0.966 4 23 hm5C_associated_SNPs_57432 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:36450213-36450233
64251 chr15 89169568 89169568 1 + G T ESCA 89169566 + 89169546 89169586 41 CAGCACCAGCGGTTCATGGCCCGGAAGGCCTTGCTGCAGGA CAGCACCAGCGGTTCATGGCCCTGAAGGCCTTGCTGCAGGA < 41bp 0.782786322534558 0.44179102138681 0.59489197 0.21358177 prediction 0.565572645069115 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169566 chr15:89169568 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_57434 0 0 2 BUD13 POSTAR2 ENCODE chr15:89169562-89169613
64251 chr5 434591 434591 1 + G T LUAD 434588 + 434568 434608 41 CCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTACATCT CCTGAAAACAGAGCCAGACTCTCTGCAACAGGTGTACATCT < 41bp 0.782741677980578 0.400882328153568 0.36963287 0.23537141 prediction 0.565483355961156 Functional Loss - AHRR ENSG00000063438 CDS Human protein_coding chr5:434588 chr5:434591 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_57440 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:434562-434646
64251 chr11 70049737 70049737 1 + G T LUAD 70049735 + 70049715 70049755 41 GGAGCAGAACGACCTGGAGCCCGGGCACACCGAGCTCCTGC GGAGCAGAACGACCTGGAGCCCTGGCACACCGAGCTCCTGC < 41bp 0.864879153999796 0.582167152413645 0.32234326 0.06891465 prediction 0.565424003172302 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049735 chr11:70049737 nonsynonymous SNV 0.265 4 23 hm5C_associated_SNPs_57445 0 0 1 RBM15 POSTAR2 ENCODE chr11:70049704-70049760
64251 chr12 7046431 7046431 1 + G C rs202117570 7046430 + 7046410 7046450 41 GTCGCCTCCCTCCTTCCGAACGGGGACCCCACCGGGCTATC GTCGCCTCCCTCCTTCCGAACCGGGACCCCACCGGGCTATC < 41bp 0.810567176126662 0.527859022025954 0.93520474 0.900486 prediction 0.565416308201417 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046430 chr12:7046431 synonymous SNV . 0 22 hm5C_associated_SNPs_57446 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:7046413-7046460
64251 chr3 14693376 14693376 1 + G T STAD 14693373 + 14693353 14693393 41 AGGAAAAAGCCTTTGGACGTCACGGCCTCCTCGGTGAGTGA AGGAAAAAGCCTTTGGACGTCACTGCCTCCTCGGTGAGTGA < 41bp 0.782647375673947 0.403699090611737 0.3557545 0.33524406 prediction 0.565294751347894 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14693373 chr3:14693376 synonymous SNV . 0 24 hm5C_associated_SNPs_57455 0 0 4 BUD13 POSTAR2 ENCODE chr3:14693372-14693419
64251 chr2 174230297 174230297 1 + G T UCEC 174230294 + 174230274 174230314 41 AGAACGTCTGCAGCAATTCTCGAGAGAAGATATATAACCGT AGAACGTCTGCAGCAATTCTCGATAGAAGATATATAACCGT < 41bp 0.89120297710624 0.608563011208738 0.92239743 0.70732534 prediction 0.565279931795004 Functional Loss - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174230294 chr2:174230297 stopgain 0.997 1 24 hm5C_associated_SNPs_57457 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:174230246-174230318
64251 chr2 220402377 220402377 1 + G T rs148622543 220402375 + 220402355 220402395 41 TGTCCTGGGATCGACTGAAGCGGGTATGGAGGCGTCCCAAG TGTCCTGGGATCGACTGAAGCGTGTATGGAGGCGTCCCAAG < 41bp 0.863483147556602 0.580862337541724 0.9188851 0.4131769 prediction 0.565241620029757 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220402375 chr2:220402377 synonymous SNV . 0 23 hm5C_associated_SNPs_57462 0 0 4 DDX55 POSTAR2 ENCODE chr2:220402344-220402381
64251 chr3 136574096 136574096 1 + G T DLBC 136574093 + 136574073 136574113 41 GTACACCATGACTGTGATGGCTGGACTGACCACTGCTCTCT GTACACCATGACTGTGATGGCTGTACTGACCACTGCTCTCT < 41bp 0.888684903090499 0.606097363051021 0.21712574 0.11437252 prediction 0.565175080078955 Functional Loss - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136574093 chr3:136574096 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_57464 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:136574067-136574109
64251 chr2 3461428 3461428 1 + G C LUSC 3461427 + 3461407 3461447 41 GAGCAAGGCTTAGCAGAAGACGGCGGCATGAGCAGCGTGAC GAGCAAGGCTTAGCAGAAGACCGCGGCATGAGCAGCGTGAC < 41bp 0.801215570798528 0.518640146964192 0.7296893 0.31086433 prediction 0.565150847668673 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3461427 chr2:3461428 nonsynonymous SNV 0.049 4 22 hm5C_associated_SNPs_57467 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:3461423-3461452
64251 chr12 7055035 7055035 1 + A C COAD 7055031 + 7055011 7055051 41 AAGGCGCTGTTTCTGCCGCCCATGACCCTGCCACCCCATGG AAGGCGCTGTTTCTGCCGCCCATGCCCCTGCCACCCCATGG < 41bp 0.782570345752794 0.417753650956765 0.26387787 0.22086099 prediction 0.565140691505587 Functional Loss - C12orf57 ENSG00000111678 CDS Human protein_coding chr12:7055031 chr12:7055035 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_57468 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7055032-7055082
64251 chr20 37580686 37580686 1 + G T CESC 37580683 + 37580663 37580703 41 ACCCAGACTGCAGTCATCACCAGGATAGCAAGCTCTCAAAC ACCCAGACTGCAGTCATCACCAGTATAGCAAGCTCTCAAAC < 41bp 0.876136057348693 0.593566530794697 0.90976286 0.19982615 prediction 0.565139053107991 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580683 chr20:37580686 nonsynonymous SNV 0.097 1 24 hm5C_associated_SNPs_57469 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37580649-37580687
64251 chr3 138066906 138066906 1 + G T rs146298087 138066903 + 138066883 138066923 41 ATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAG ATCCCAACGAAGTTTGGGCCCTGTAACGGTGCACCCAGAAG < 41bp 0.834530030579733 0.551964034040991 0.15050843 0.062969714 prediction 0.565131993077484 Functional Loss - MRAS ENSG00000158186 UTR5 Human protein_coding chr3:138066903 chr3:138066906 . . 0 24 hm5C_associated_SNPs_57470 0 0 1 SMNDC1 POSTAR2 ENCODE chr3:138066903-138066927
64251 chr19 10220892 10220892 1 + G T LUSC 10220890 + 10220870 10220910 41 TCGCTGGCCGTGGCAACATGCGGGCCCAGCAGAGTGCAGTG TCGCTGGCCGTGGCAACATGCGTGCCCAGCAGAGTGCAGTG < 41bp 0.782564525680599 0.430469237125736 0.9214189 0.32906207 prediction 0.565129051361199 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10220890 chr19:10220892 synonymous SNV . 0 23 hm5C_associated_SNPs_57471 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10220876-10220898
64251 chr16 70500067 70500067 1 + G T LUAD 70500064 + 70500044 70500084 41 TTCCCCTTTGATGACTGTGGCAGGGCTTTCACCTGCCTCCC TTCCCCTTTGATGACTGTGGCAGTGCTTTCACCTGCCTCCC < 41bp 0.782551777424187 0.384658879566589 0.9347023 0.77892065 prediction 0.565103554848375 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70500064 chr16:70500067 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_57472 0 0 3 DDX24 POSTAR2 ENCODE chr16:70500038-70500174
64251 chr9 131763856 131763856 1 + G C BLCA 131763855 + 131763835 131763875 41 AAGGAGCTGTGTGAGGTAGACGAGGATGGTGACTCCTGGCT AAGGAGCTGTGTGAGGTAGACCAGGATGGTGACTCCTGGCT < 41bp 0.782519820935552 0.479530467852344 0.8726995 0.72853166 prediction 0.565039641871103 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131763855 chr9:131763856 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_57477 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr9:131763840-131763868
64251 chr3 23848829 23848829 1 + G T COAD 23848826 + 23848806 23848846 41 TCGTCTTCCAACCAGCAAACCGAGAAAGAAACAAACACCCC TCGTCTTCCAACCAGCAAACCGATAAAGAAACAAACACCCC < 41bp 0.884132591786234 0.601657699925845 0.44178316 0.74496144 prediction 0.564949783720778 Functional Loss - UBE2E1 ENSG00000170142 CDS Human protein_coding chr3:23848826 chr3:23848829 nonsynonymous SNV 0.963 0 24 hm5C_associated_SNPs_57485 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:23848800-23848840
64251 chr1 147091473 147091473 1 + G T UCEC 147091471 + 147091451 147091491 41 TCCAGGACATGATGGTCCATCAGCACGGGCCTCGGGGAGTG TCCAGGACATGATGGTCCATCATCACGGGCCTCGGGGAGTG < 41bp 0.848616631456703 0.566143549969006 0.41798383 0.28813806 prediction 0.564946162975395 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091471 chr1:147091473 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_57486 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr1:147091472-147091473
64251 chr9 32431832 32431832 1 + G T UCEC 32431830 + 32431810 32431850 41 GGATGTTTAAGGAAGTCTATCAGAAAATAGAGGTGAGGTCC GGATGTTTAAGGAAGTCTATCATAAAATAGAGGTGAGGTCC < 41bp 0.782456908729082 0.4498047637456 0.8359215 0.41201258 prediction 0.564913817458164 Functional Loss - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32431830 chr9:32431832 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_57488 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:32431817-32431839
64251 chr9 4985384 4985384 1 + G T rs548411203 4985382 + 4985362 4985402 41 ACTTCGGCTTCTCGGCCGGTCGGGCCCCTCGGCCCGGGCTT ACTTCGGCTTCTCGGCCGGTCGTGCCCCTCGGCCCGGGCTT < 41bp 0.83818950482368 0.555738179209001 0.9142103 0.35269862 prediction 0.564902651229357 Functional Loss - JAK2 ENSG00000096968 UTR5 Human protein_coding chr9:4985382 chr9:4985384 . . 0 23 hm5C_associated_SNPs_57490 0 0 2 DDX3X POSTAR2 ENCODE chr9:4985357-4985540
64251 chr16 2283182 2283182 1 + G T HNSC 2283180 + 2283160 2283200 41 GGGCATGAAAGCCCTGGCCCCAGAGGTGGGGGCGACGGGGG GGGCATGAAAGCCCTGGCCCCATAGGTGGGGGCGACGGGGG < 41bp 0.782447074406996 0.44435623850074 0.92422116 0.4258343 prediction 0.564894148813993 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2283180 chr16:2283182 stopgain 0.829 1 23 hm5C_associated_SNPs_57491 0 0 4 DDX24 POSTAR2 ENCODE chr16:2283171-2283228
64251 chr16 28845713 28845713 1 + A T LUAD 28845709 + 28845689 28845729 41 TATCCAATTCAGTGCCTGGGCAGCAGGGCAAGTACCGGGGA TATCCAATTCAGTGCCTGGGCAGCTGGGCAAGTACCGGGGA < 41bp 0.782444080089582 0.479339505235627 0.16766334 0.1970312 prediction 0.564888160179165 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845709 chr16:28845713 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_57492 0 0 26 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:28845664-28845730
64251 chr8 86389399 86389399 1 + A T PRAD 86389395 + 86389375 86389415 41 CGATCCTCGTGGCCTCCTTCCTGAATCCTTGGATTACTGGA CGATCCTCGTGGCCTCCTTCCTGATTCCTTGGATTACTGGA < 41bp 0.782414078240242 0.45764221147369 0.16147977 0.14161542 prediction 0.564828156480484 Functional Loss - CA2 ENSG00000104267 CDS Human protein_coding chr8:86389395 chr8:86389399 nonsynonymous SNV 0.110 1 25 hm5C_associated_SNPs_57495 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:86389360-86389420
64251 chr2 9576392 9576392 1 + G T UCEC 9576389 + 9576369 9576409 41 GAAACGTGAAGAGCGAGAAGCAAGATTCTGTAACACTGTCC GAAACGTGAAGAGCGAGAAGCAATATTCTGTAACACTGTCC < 41bp 0.782411669475265 0.403206126517748 0.19514462 0.18042687 prediction 0.56482333895053 Functional Loss - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9576389 chr2:9576392 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57496 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:9576349-9576425
64251 chr15 22993100 22993100 1 + A T CESC 22993096 + 22993076 22993116 41 AGCTGAAGACGGTGTGCTTCCAGAACCTGCGGGAGGTGGGG AGCTGAAGACGGTGTGCTTCCAGATCCTGCGGGAGGTGGGG < 41bp 0.782364576899049 0.477037189707473 0.7646258 0.8091545 prediction 0.564729153798098 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22993096 chr15:22993100 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_57501 0 0 4 FMR1 POSTAR2 ENCODE chr15:22993082-22993142
64251 chr16 90065498 90065498 1 + G T rs9934828 90065496 + 90065476 90065516 41 GCTGTCTGGTATAGAGGAGCCTGGGGATCAGGTGTAGCTGC GCTGTCTGGTATAGAGGAGCCTTGGGATCAGGTGTAGCTGC < 41bp 0.782354617755665 0.486536842841592 0.87395614 0.7192353 prediction 0.564709235511329 Functional Loss - AFG3L1P ENSG00000223959 ncRNA_exonic Human transcribed_unitary_pseudogene chr16:90065496 chr16:90065498 . . 0 23 hm5C_associated_SNPs_57503 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:90065487-90065516
64251 chr1 897819 897819 1 + G T ESCA 897816 + 897796 897836 41 CCGTCCTGAGCTGGGTGAAACACGACGTGGACGCCCGCAGG CCGTCCTGAGCTGGGTGAAACACTACGTGGACGCCCGCAGG < 41bp 0.899458305812317 0.61712610764214 0.50244135 0.3603292 prediction 0.564664396340353 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897816 chr1:897819 nonsynonymous SNV 0.907 4 24 hm5C_associated_SNPs_57505 0 0 1 PPIG POSTAR2 ENCODE chr1:897794-897845
64251 chr16 30975983 30975983 1 + A C UCEC 30975979 + 30975959 30975999 41 GGCGGTCAGAGAACAGCTACCAAGATGCCTTTTCCCGCCGC GGCGGTCAGAGAACAGCTACCAAGCTGCCTTTTCCCGCCGC < 41bp 0.782329907727401 0.389242920920225 0.9093015 0.8144871 prediction 0.564659815454801 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30975979 chr16:30975983 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_57506 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30975980-30976000
64251 chr16 30975982 30975982 1 + G T UCEC 30975979 + 30975959 30975999 41 GGCGGTCAGAGAACAGCTACCAAGATGCCTTTTCCCGCCGC GGCGGTCAGAGAACAGCTACCAATATGCCTTTTCCCGCCGC < 41bp 0.782329907727401 0.397664519476299 0.9093015 0.27703947 prediction 0.564659815454801 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30975979 chr16:30975982 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57507 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30975980-30976000
64251 chr12 113706599 113706599 1 + A T LUSC 113706595 + 113706575 113706615 41 AGGCCATCGTGGTGTTGGTACGGCAGATGTCCCATGTGCGG AGGCCATCGTGGTGTTGGTACGGCTGATGTCCCATGTGCGG < 41bp 0.841500594593717 0.559186187173912 0.4020794 0.3623293 prediction 0.564628814839609 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113706595 chr12:113706599 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_57513 0 0 3 DDX24 POSTAR2 ENCODE chr12:113706565-113706678
64251 chr2 219678840 219678840 1 + G C PAAD 219678839 + 219678819 219678859 41 GTGGTGGGTGTGGTGCCAGCCGGGCAAGTGCCCCAGCACAA GTGGTGGGTGTGGTGCCAGCCCGGCAAGTGCCCCAGCACAA < 41bp 0.817252321896457 0.534945437775084 0.81011623 0.31538177 prediction 0.564613768242746 Functional Loss - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219678839 chr2:219678840 nonsynonymous SNV 0.894 1 22 hm5C_associated_SNPs_57516 0 0 3 RPS3 POSTAR2 ENCODE chr2:219678809-219678860
64251 chr1 26509065 26509065 1 + A T LUSC 26509061 + 26509041 26509081 41 CCGTGCTCGAGCAGGTGCAGCTGGACAGTCCATTGGTGAGC CCGTGCTCGAGCAGGTGCAGCTGGTCAGTCCATTGGTGAGC < 41bp 0.839133033589766 0.556829506185573 0.8827727 0.83873606 prediction 0.564607054808387 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26509061 chr1:26509065 nonsynonymous SNV 0.920 0 25 hm5C_associated_SNPs_57518 0 0 1 PRPF8 POSTAR2 ENCODE chr1:26509022-26509114
64251 chr11 65265393 65265393 1 + G T LAML 65265391 + 65265371 65265411 41 TTCCCAGAGTCCTTGGGACGCAGCGACGAGTTGTGCTGCTA TTCCCAGAGTCCTTGGGACGCATCGACGAGTTGTGCTGCTA < 41bp 0.782294291036625 0.467429547651638 0.5892387 0.2680831 prediction 0.564588582073251 Functional Loss - MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65265391 chr11:65265393 . . 0 23 hm5C_associated_SNPs_57520 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65265378-65265411
64251 chr15 40764589 40764589 1 + A T rs74011159 40764585 + 40764565 40764605 41 CTGGTGGGGACTGGTTTCAACGCCAGCTTTCTGTGCTTCTG CTGGTGGGGACTGGTTTCAACGCCTGCTTTCTGTGCTTCTG < 41bp 0.795450468362365 0.513167516839376 0.16420752 0.091697365 prediction 0.564565903045978 Functional Loss - CHST14 ENSG00000169105 UTR3 Human protein_coding chr15:40764585 chr15:40764589 . . 0 25 hm5C_associated_SNPs_57523 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:40764550-40764596
64251 chr3 137963964 137963964 1 + G C LUSC 137963963 + 137963943 137963983 41 TAAAACATGCTCACGAACTCCGCCAGGCTGCATTCAAGCTC TAAAACATGCTCACGAACTCCCCCAGGCTGCATTCAAGCTC < 41bp 0.78979147305709 0.507513415403656 0.14978513 0.07643175 prediction 0.564556115306869 Functional Loss - ARMC8 ENSG00000114098 CDS Human protein_coding chr3:137963963 chr3:137963964 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_57524 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:137963930-137963987
64251 chr19 34832720 34832720 1 + G T COAD 34832718 + 34832698 34832738 41 TGGAGAGGCGTGAGAACTTCCTGCATGGAGATGACGGCAAG TGGAGAGGCGTGAGAACTTCCTTCATGGAGATGACGGCAAG < 41bp 0.782244141924143 0.466054076778967 0.7667465 0.17275718 prediction 0.564488283848286 Functional Loss - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832718 chr19:34832720 synonymous SNV . 0 23 hm5C_associated_SNPs_57526 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:34832689-34832720
64251 chr12 28458625 28458625 1 + G T LUSC 28458623 + 28458603 28458643 41 CATCTTCTCCTGAGATTGTACTGGACCGTGACCACTCTTCT CATCTTCTCCTGAGATTGTACTTGACCGTGACCACTCTTCT < 41bp 0.782154031710588 0.463251056632016 0.074328125 0.027626008 prediction 0.564308063421176 Functional Loss - CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28458623 chr12:28458625 synonymous SNV . 0 23 hm5C_associated_SNPs_57535 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:28458608-28458644
64251 chr17 4686189 4686189 1 + G C CESC 4686188 + 4686168 4686208 41 CGCACTCTATGGGATCGGTGCGAGGCGCCCCCTCGCGTGGT CGCACTCTATGGGATCGGTGCCAGGCGCCCCCTCGCGTGGT < 41bp 0.782150102323529 0.472891584215727 0.841995 0.3309468 prediction 0.564300204647059 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4686188 chr17:4686189 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_57538 0 0 6 PRPF8 POSTAR2 ENCODE chr17:4686185-4686207
64251 chr5 110428101 110428101 1 + G T STAD 110428098 + 110428078 110428118 41 CACTAGACACGCTGAAGGGACTGGGTACGTGTTTTCCTTCA CACTAGACACGCTGAAGGGACTGTGTACGTGTTTTCCTTCA < 41bp 0.890895842196136 0.608792286774798 0.2916686 0.03134942 prediction 0.564207110842675 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110428098 chr5:110428101 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_57542 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:110428100-110428120
64251 chr17 54912337 54912337 1 + G T OV 54912334 + 54912314 54912354 41 ACATCTTCCGCAAGAGCAAGCACGGGTGGCGCGACACGGAC ACATCTTCCGCAAGAGCAAGCACTGGTGGCGCGACACGGAC < 41bp 0.890368730799211 0.60827571174239 0.5013142 0.3094793 prediction 0.564186038113643 Functional Loss - DGKE ENSG00000153933 CDS Human protein_coding chr17:54912334 chr17:54912337 nonsynonymous SNV 0.942 3 24 hm5C_associated_SNPs_57543 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:54912333-54912357
64251 chrX 140996688 140996688 1 + G T rs141025681 140996685 + 140996665 140996705 41 GTTTCTACGTGGTGGAGGGCCTGGTTGAGGCTGGAGAGAAC GTTTCTACGTGGTGGAGGGCCTGTTTGAGGCTGGAGAGAAC < 41bp 0.782077760114287 0.411329292070178 0.2854486 0.1550259 prediction 0.564155520228574 Functional Loss - MAGEC1 ENSG00000155495 UTR3 Human protein_coding chrX:140996685 chrX:140996688 . . 0 24 hm5C_associated_SNPs_57547 0 0 2 SUB1 POSTAR2 ENCODE chrX:140996664-140996714
64251 chr2 37319156 37319156 1 + A C rs62621388 37319152 + 37319132 37319172 41 GATTCACATGAAAAACCAAGCTGAAGAAAAAGCTGCAGAAC GATTCACATGAAAAACCAAGCTGACGAAAAAGCTGCAGAAC < 41bp 0.782077451148031 0.385206578089844 0.09329513 0.08930096 prediction 0.564154902296062 Functional Loss - GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37319152 chr2:37319156 nonsynonymous SNV 0.939 1 25 hm5C_associated_SNPs_57548 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:37319145-37319166
64251 chr22 38455325 38455325 1 + G T UCEC 38455323 + 38455303 38455343 41 TCAGCATTGGAGGAGGGGCCCAGTACTGTCCCTGCCTCTAT TCAGCATTGGAGGAGGGGCCCATTACTGTCCCTGCCTCTAT < 41bp 0.782074937506932 0.447799819842487 0.26620752 0.14499405 prediction 0.564149875013863 Functional Loss - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38455323 chr22:38455325 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_57549 0 0 3 PPIG POSTAR2 ENCODE chr22:38455290-38455348
64251 chr6 35436650 35436650 1 + A C SKCM 35436646 + 35436626 35436666 41 ACGGGAACCAGCGCAAGCGCCGCAAGTGAGTGCCGACCCTG ACGGGAACCAGCGCAAGCGCCGCACGTGAGTGCCGACCCTG < 41bp 0.885234664356716 0.603187556496453 0.23854473 0.13368312 prediction 0.564094215720526 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436646 chr6:35436650 nonsynonymous SNV 0.840 2 25 hm5C_associated_SNPs_57552 0 0 2 PRPF8 POSTAR2 ENCODE chr6:35436633-35436696
64251 chr9 88635862 88635862 1 + G T BLCA 88635859 + 88635839 88635879 41 TGTGGTTATGAAGTTATTGGCAGGAGGACACAAAAAGGAAT TGTGGTTATGAAGTTATTGGCAGTAGGACACAAAAAGGAAT < 41bp 0.782041607291678 0.417163466620534 0.6465107 0.21336189 prediction 0.564083214583357 Functional Loss - NAA35 ENSG00000135040 CDS Human protein_coding chr9:88635859 chr9:88635862 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_57554 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:88635844-88635867
64251 chr16 50063678 50063678 1 + G T ACC 50063676 + 50063656 50063696 41 GTCTGTACAGCTACTGGTGCCTGGAACTGGTTAATAGACCC GTCTGTACAGCTACTGGTGCCTTGAACTGGTTAATAGACCC < 41bp 0.830599425301001 0.54857282144663 0.4510769 0.14309087 prediction 0.564053207708742 Functional Loss - CNEP1R1 ENSG00000205423 CDS Human protein_coding chr16:50063676 chr16:50063678 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_57557 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:50063645-50063702
64251 chr5 31554333 31554333 1 + A C rs3733715 31554329 + 31554309 31554349 41 ATCATTCCTCAGTCCCAACACAGCAGTTCTTTTCACTCTTG ATCATTCCTCAGTCCCAACACAGCCGTTCTTTTCACTCTTG < 41bp 0.782024109864839 0.42559728743207 0.08060086 0.055461526 prediction 0.564048219729678 Functional Loss - C5orf22 ENSG00000082213 UTR3 Human protein_coding chr5:31554329 chr5:31554333 . . 0 25 hm5C_associated_SNPs_57558 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:31554294-31554376
64251 chr1 247769094 247769094 1 + G T LUAD 247769092 + 247769072 247769112 41 TTCTCAGCAACCTCTCTTTACTGGACATCTGCTTCACTACT TTCTCAGCAACCTCTCTTTACTTGACATCTGCTTCACTACT < 41bp 0.782015324766608 0.465173030638433 0.046181798 0.032859594 prediction 0.564030649533216 Functional Loss - OR2G3 ENSG00000177476 CDS Human protein_coding chr1:247769092 chr1:247769094 synonymous SNV . 0 23 hm5C_associated_SNPs_57561 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:247769073-247769094
64251 chr1 151020564 151020564 1 + G T SARC 151020562 + 151020542 151020582 41 CGCCGACCGCCTGGCTGGACCAGCGGCTGCCGAGCTCTTGG CGCCGACCGCCTGGCTGGACCATCGGCTGCCGAGCTCTTGG < 41bp 0.877419915333061 0.595450217438497 0.56622565 0.16841748 prediction 0.563939395789127 Functional Loss - C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020562 chr1:151020564 nonsynonymous SNV 0.005 4 23 hm5C_associated_SNPs_57566 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:151020564-151020565
64251 chr2 206617608 206617608 1 + C T UCEC 206617606 + 206617586 206617626 41 TCAATTGCAACTTCGATTTCCTCGAGGAGCCCTGTGGTTGG TCAATTGCAACTTCGATTTCCTTGAGGAGCCCTGTGGTTGG < 41bp 0.791336664357934 0.509438385218624 0.32032362 0.12751332 prediction 0.563796558278622 Functional Loss - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206617606 chr2:206617608 synonymous SNV . 0 23 hm5C_associated_SNPs_57575 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:206617594-206617625
64251 chrX 154002941 154002941 1 + G T SARC 154002939 + 154002919 154002959 41 AAGCATGGGAAGCCCACAGACAGCACACCTGCCACCTGGAA AAGCATGGGAAGCCCACAGACATCACACCTGCCACCTGGAA < 41bp 0.864169179884809 0.582291748834464 0.21058819 0.09093976 prediction 0.563754862100691 Functional Loss - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154002939 chrX:154002941 nonsynonymous SNV 0.060 3 23 hm5C_associated_SNPs_57576 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:154002878-154002941
64251 chr19 50189933 50189933 1 + G T PCPG 50189931 + 50189911 50189951 41 GGACTACCTGACCGTGAAGACGGGCGAGGAGATCTTCGGCA GGACTACCTGACCGTGAAGACGTGCGAGGAGATCTTCGGCA < 41bp 0.855305467245628 0.573429685391337 0.4237628 0.14477068 prediction 0.563751563708581 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50189931 chr19:50189933 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_57577 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chr19:50189891-50189942
64251 chr1 54417760 54417760 1 + G T LUAD 54417757 + 54417737 54417777 41 GGCAGCTGCACATGGTCAATCTGGCTCTGGATGGTGTCAGG GGCAGCTGCACATGGTCAATCTGTCTCTGGATGGTGTCAGG < 41bp 0.781866145440986 0.390477128420511 0.4126393 0.34979331 prediction 0.563732290881973 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54417757 chr1:54417760 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_57578 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:54417751-54417777
64251 chr22 42090069 42090069 1 + A C rs739135 42090065 + 42090045 42090085 41 GGGAACCAGGGGGTAAAAACCAGAAAGCAGGCAGAGAGGAT GGGAACCAGGGGGTAAAAACCAGACAGCAGGCAGAGAGGAT < 41bp 0.78185694501923 0.412971626408295 0.8758528 0.75964403 prediction 0.56371389003846 Functional Loss - C22orf46 ENSG00000184208 UTR3 Human protein_coding chr22:42090065 chr22:42090069 . . 0 25 hm5C_associated_SNPs_57579 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:42090060-42090080
64251 chr17 1674340 1674340 1 + G T UCEC 1674338 + 1674318 1674358 41 GGCAGGAGCGGAGCAGCGAACAGAATCCATCATTCACCGGG GGCAGGAGCGGAGCAGCGAACATAATCCATCATTCACCGGG < 41bp 0.869614126823336 0.587762912604234 0.15640694 0.02991587 prediction 0.563702428438205 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1674338 chr17:1674340 stopgain 0.130 1 23 hm5C_associated_SNPs_57581 0 0 7 BUD13 POSTAR2 ENCODE chr17:1674264-1674376
64251 chr19 18305866 18305866 1 + G T STAD 18305863 + 18305843 18305883 41 ATCAACGGCCTGACGCTGGGCTGGGACACGTACCTGTCCTA ATCAACGGCCTGACGCTGGGCTGTGACACGTACCTGTCCTA < 41bp 0.781850785227771 0.390024210721258 0.22572288 0.020427942 prediction 0.563701570455543 Functional Loss - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18305863 chr19:18305866 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57582 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:18305840-18305866
64251 chrX 47062948 47062948 1 + G C CESC 47062947 + 47062927 47062967 41 GGTTGCTTCTTAGGTGGGTGCGGGGGCCATTGGCTGTGAGC GGTTGCTTCTTAGGTGGGTGCCGGGGCCATTGGCTGTGAGC < 41bp 0.781835721905654 0.472579942286267 0.92791945 0.92337835 prediction 0.563671443811309 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47062947 chrX:47062948 synonymous SNV . 0 22 hm5C_associated_SNPs_57583 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:47062940-47062966
64251 chr20 42249524 42249524 1 + G T COAD 42249522 + 42249502 42249542 41 TGTTTTCCAGTGGCTCACGACAGGAGACATCCACCTAAACC TGTTTTCCAGTGGCTCACGACATGAGACATCCACCTAAACC < 41bp 0.781821675452578 0.460649005892094 0.3386308 0.10388124 prediction 0.563643350905156 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42249522 chr20:42249524 stopgain 0.791 0 23 hm5C_associated_SNPs_57587 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42249500-42249524
64251 chr7 102106463 102106463 1 + G T KIRC 102106460 + 102106440 102106480 41 CCTTGTGCCAGTTCCCCAAGCTCGAGGAACTCAGCCTGGAG CCTTGTGCCAGTTCCCCAAGCTCTAGGAACTCAGCCTGGAG < 41bp 0.895880546483142 0.614061146208018 0.15310752 0.5372774 prediction 0.563638800550247 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102106460 chr7:102106463 stopgain 0.541 1 24 hm5C_associated_SNPs_57588 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:102106461-102106498
64251 chr5 158696032 158696032 1 + G T PAAD 158696030 + 158696010 158696050 41 ACAGTTTCTCAAGACCCTTACAGGAGTTCTTCCAGAACGCC ACAGTTTCTCAAGACCCTTACATGAGTTCTTCCAGAACGCC < 41bp 0.828865220687776 0.547066342637675 0.87511504 0.17476198 prediction 0.563597756100203 Functional Loss - UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158696030 chr5:158696032 stopgain 0.998 1 23 hm5C_associated_SNPs_57589 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr5:158696014-158696039
64251 chr16 3188811 3188811 1 + G T BRCA 3188809 + 3188789 3188829 41 GACGGACACCTGCTTTGTCTCTGGGGTCCATGTGAGTCACC GACGGACACCTGCTTTGTCTCTTGGGTCCATGTGAGTCACC < 41bp 0.78179127084989 0.450589723151539 0.90047276 0.10988042 prediction 0.56358254169978 Functional Loss - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3188809 chr16:3188811 nonsynonymous SNV 0.024 3 23 hm5C_associated_SNPs_57591 0 0 1 PRPF8 POSTAR2 ENCODE chr16:3188804-3188850
64251 chr1 196642213 196642213 1 + G T LUSC 196642210 + 196642190 196642230 41 GGCTATCTATAAATGCCGCCCTGGATATAGATCTCTTGGAA GGCTATCTATAAATGCCGCCCTGTATATAGATCTCTTGGAA < 41bp 0.781774671568894 0.408216971750901 0.2911869 0.1132091 prediction 0.563549343137788 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196642210 chr1:196642213 nonsynonymous SNV 0.435 3 24 hm5C_associated_SNPs_57596 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:196642187-196642225
64251 chr3 38566902 38566902 1 + G T rs79750058 38566900 + 38566880 38566920 41 GCATGCTTGGCAAGAAGAGTCTGGTTTCTCGTCTGCTATGC GCATGCTTGGCAAGAAGAGTCTTGTTTCTCGTCTGCTATGC < 41bp 0.785342611720579 0.503571406374632 0.60196024 0.3139735 prediction 0.563542410691894 Functional Loss - EXOG ENSG00000157036 UTR3 Human protein_coding chr3:38566900 chr3:38566902 . . 0 23 hm5C_associated_SNPs_57597 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:38566901-38566902
64251 chr9 130207074 130207074 1 + G T LUSC 130207071 + 130207051 130207091 41 GAGAAGCCCTACAGATGTGCCGCGTGTGGGAAGGCCTTCAG GAGAAGCCCTACAGATGTGCCGCTTGTGGGAAGGCCTTCAG < 41bp 0.781751498076424 0.394278603947341 0.09098604 0.029869586 prediction 0.563502996152847 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207071 chr9:130207074 synonymous SNV . 0 24 hm5C_associated_SNPs_57599 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:130207049-130207087
64251 chr9 80923411 80923411 1 + G T LUAD 80923408 + 80923388 80923428 41 TGATTGTCCGTGATGACCTGCTGGGGTTTGCCCTCCGAGAG TGATTGTCCGTGATGACCTGCTGTGGTTTGCCCTCCGAGAG < 41bp 0.902636699400387 0.620896148355144 0.4192084 0.27239782 prediction 0.563481102090485 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80923408 chr9:80923411 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_57602 0 0 29 TARDBP POSTAR2 DRA001158,DRS012387 chr9:80923327-80923454
64251 chr16 23848711 23848711 1 + G T LUAD 23848709 + 23848689 23848729 41 TTTGCAGGGGCTTCGGGAAGCAGGGATTCCAGTGCCAAGGT TTTGCAGGGGCTTCGGGAAGCATGGATTCCAGTGCCAAGGT < 41bp 0.862726458014115 0.581013634531276 0.9201372 0.89106315 prediction 0.563425646965679 Functional Loss - PRKCB ENSG00000166501 CDS Human protein_coding chr16:23848709 chr16:23848711 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_57605 0 0 4 DDX24 POSTAR2 ENCODE chr16:23848692-23848728
64251 chr18 77894214 77894214 1 + A T COAD 77894210 + 77894190 77894230 41 GAACAGTCCAAGCCCAGCCGCAGGACAGCCAGTGACTGTGG GAACAGTCCAAGCCCAGCCGCAGGTCAGCCAGTGACTGTGG < 41bp 0.816289451077524 0.534582277894684 0.75917536 0.37606603 prediction 0.56341434636568 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894210 chr18:77894214 synonymous SNV . 0 25 hm5C_associated_SNPs_57607 0 0 1 IGF2BP1 POSTAR2 ENCODE chr18:77894208-77894272
64251 chr3 150127639 150127639 1 + G T LUAD 150127636 + 150127616 150127656 41 CCCGTTTTCGCGTGATCAAGCTGGACCACGGGAGCGGAGAG CCCGTTTTCGCGTGATCAAGCTGTACCACGGGAGCGGAGAG < 41bp 0.893953926079266 0.612268651320611 0.34028804 0.18784615 prediction 0.563370549517312 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127636 chr3:150127639 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57612 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:150127620-150127640
64251 chr8 126114681 126114681 1 + G T STAD 126114679 + 126114659 126114699 41 CTTCCAAGCCTGTATCAACTCTGGTATGGACACAGCTTCTA CTTCCAAGCCTGTATCAACTCTTGTATGGACACAGCTTCTA < 41bp 0.84191393386609 0.5602623416614 0.08702859 0.09411016 prediction 0.563303184409378 Functional Loss - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126114679 chr8:126114681 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57616 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:126114674-126114697
64251 chr11 563395 563395 1 + G T COAD 563393 + 563373 563413 41 CAAGCTGACTTCCCAACCCACAGGGCCCTCTGCCTCCAGCC CAAGCTGACTTCCCAACCCACATGGCCCTCTGCCTCCAGCC < 41bp 0.860894768782497 0.579276102892182 0.9468026 0.40957 prediction 0.563237331780631 Functional Loss - RASSF7 ENSG00000099849 splicing Human protein_coding chr11:563393 chr11:563395 . 0.490 0 23 hm5C_associated_SNPs_57623 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:563377-563415
64251 chr2 32339791 32339791 1 + G T LUAD 32339788 + 32339768 32339808 41 TTCAAAAACAGTTATGAAAACTGGATCTGCAGGCCTTTCAG TTCAAAAACAGTTATGAAAACTGTATCTGCAGGCCTTTCAG < 41bp 0.890894353446657 0.609276078814405 0.4615939 0.23922908 prediction 0.563236549264504 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32339788 chr2:32339791 nonsynonymous SNV 0.933 0 24 hm5C_associated_SNPs_57624 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:32339781-32339803
64251 chr17 40721298 40721298 1 + G T SARC 40721296 + 40721276 40721316 41 TCCATTGGCTCCCAAAAGCTCAGCAAAGCCATCGTTCTACA TCCATTGGCTCCCAAAAGCTCATCAAAGCCATCGTTCTACA < 41bp 0.856244578085571 0.574647334310334 0.78961456 0.82296443 prediction 0.563194487550475 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40721296 chr17:40721298 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_57626 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:40721297-40721298
64251 chr1 10689760 10689760 1 + G T LUAD 10689757 + 10689737 10689777 41 CTGGGAAGGAGGGCCACAGCCCCGAGGGCTCCACGGTCACC CTGGGAAGGAGGGCCACAGCCCCTAGGGCTCCACGGTCACC < 41bp 0.884401030943505 0.602807054000369 0.1189408 0.035145015 prediction 0.563187953886273 Functional Loss - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689757 chr1:10689760 stopgain 0.995 0 24 hm5C_associated_SNPs_57627 0 0 1 RPS3 POSTAR2 ENCODE chr1:10689694-10689874
64251 chr17 78023904 78023904 1 + G T LUSC 78023902 + 78023882 78023922 41 GCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAG GCCGAGCCCAGCGGCAGGAGCTTGGGGTGAATCTCTATGAG < 41bp 0.871620257798469 0.590030283676231 0.8996602 0.70448303 prediction 0.563179948244475 Functional Loss - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78023902 chr17:78023904 synonymous SNV . 0 23 hm5C_associated_SNPs_57629 0 0 3 PPIG POSTAR2 ENCODE chr17:78023850-78023910
64251 chr2 10188583 10188583 1 + A T UCEC 10188579 + 10188559 10188599 41 GTTGTTGCCCCTTGCCCCTGCTCCAGTGTTCATCACCTCTA GTTGTTGCCCCTTGCCCCTGCTCCTGTGTTCATCACCTCTA < 41bp 0.781574165861987 0.430801924897671 0.65550244 0.123805285 prediction 0.563148331723975 Functional Loss - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188579 chr2:10188583 synonymous SNV . 0 25 hm5C_associated_SNPs_57632 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:10188559-10188615
64251 chr11 31392336 31392336 1 + G T UCEC 31392334 + 31392314 31392354 41 ATGCCAAAAAAGGATTGGTACAGCATCCTGGGAGCAGACCC ATGCCAAAAAAGGATTGGTACATCATCCTGGGAGCAGACCC < 41bp 0.78156050007131 0.44768444543553 0.35044134 0.11680102 prediction 0.56312100014262 Functional Loss - DNAJC24 ENSG00000170946 CDS Human protein_coding chr11:31392334 chr11:31392336 nonsynonymous SNV 0.690 0 23 hm5C_associated_SNPs_57635 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:31392321-31392347
64251 chr6 26158542 26158542 1 + G T LUAD 26158539 + 26158519 26158559 41 ATGTGTACAAGGTGCTGAAGCAGGTCCATCCCGACACCGGC ATGTGTACAAGGTGCTGAAGCAGTTCCATCCCGACACCGGC < 41bp 0.781549081405935 0.394660312973006 0.55661386 0.20442444 prediction 0.56309816281187 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158539 chr6:26158542 nonsynonymous SNV 0.889 3 24 hm5C_associated_SNPs_57637 0 0 49 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158340-26158620
64251 chr3 20153178 20153178 1 + G T DLBC 20153175 + 20153155 20153195 41 TTTGGGAGAACATTGCTTCGCTCGGTCTTCACTGTTATGAG TTTGGGAGAACATTGCTTCGCTCTGTCTTCACTGTTATGAG < 41bp 0.781541988415167 0.398496815939457 0.06058204 0.059881 prediction 0.563083976830335 Functional Loss - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20153175 chr3:20153178 synonymous SNV . 0 24 hm5C_associated_SNPs_57638 0 0 2 RBM15 POSTAR2 ENCODE chr3:20153157-20153216
64251 chr6 111409219 111409219 1 + G T KIRP 111409217 + 111409197 111409237 41 ACGGGTCGGTGTTCGGCATCCAGAACGCTTGCGGGGTGCTC ACGGGTCGGTGTTCGGCATCCATAACGCTTGCGGGGTGCTC < 41bp 0.860959406564778 0.579454484314804 0.5691177 0.2198613 prediction 0.563009844499949 Functional Loss - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111409217 chr6:111409219 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_57643 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr6:111409214-111409249
64251 chr1 76343968 76343968 1 + G T UCEC 76343965 + 76343945 76343985 41 AAATGAATTTCTTGACATAGCAAGAAGAACATACACAGAGA AAATGAATTTCTTGACATAGCAATAAGAACATACACAGAGA < 41bp 0.781473111609912 0.434588488634194 0.319515 0.053442627 prediction 0.562946223219824 Functional Loss - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76343965 chr1:76343968 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_57647 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:76343942-76343975
64251 chr5 156727882 156727882 1 + A T SARC 156727878 + 156727858 156727898 41 AAGAACATGAAGTGCAGCGTCAAGAATGACCACTCTGCCTA AAGAACATGAAGTGCAGCGTCAAGTATGACCACTCTGCCTA < 41bp 0.781460143856567 0.46864369811039 0.33199513 0.25333622 prediction 0.562920287713135 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156727878 chr5:156727882 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_57648 0 0 1 BUD13 POSTAR2 ENCODE chr5:156727846-156727912
64251 chr22 35723368 35723368 1 + G T LUSC 35723366 + 35723346 35723386 41 CCCAGGCCGAGCCCGCAGACCTGGAGCTGCTGCAGGTGAGC CCCAGGCCGAGCCCGCAGACCTTGAGCTGCTGCAGGTGAGC < 41bp 0.854538168794314 0.57308213439226 0.4552461 0.22195843 prediction 0.562912068804109 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35723366 chr22:35723368 synonymous SNV . 0 23 hm5C_associated_SNPs_57649 0 0 5 DDX24 POSTAR2 ENCODE chr22:35723293-35723382
64251 chr4 48852020 48852020 1 + G T LUSC 48852017 + 48851997 48852037 41 TTTCTTATGTGAAAACTTGCCAAGAGAAATTCAAGAAACTT TTTCTTATGTGAAAACTTGCCAATAGAAATTCAAGAAACTT < 41bp 0.781451973531791 0.425489488136201 0.30022037 0.04212767 prediction 0.562903947063582 Functional Loss - OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48852017 chr4:48852020 stopgain 1.000 1 24 hm5C_associated_SNPs_57651 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:48851976-48852100
64251 chr3 44700974 44700974 1 + G T BLCA 44700971 + 44700951 44700991 41 GACTGTGGCAAAGCCTTTACCCAGAGTGCAAATCTTATTGT GACTGTGGCAAAGCCTTTACCCATAGTGCAAATCTTATTGT < 41bp 0.781428151859439 0.403859477771003 0.75355077 0.0962148 prediction 0.562856303718879 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700971 chr3:44700974 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_57653 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:44700961-44700990
64251 chr2 241538227 241538227 1 + G T rs549309549 241538225 + 241538205 241538245 41 GGCCTGCCTCCCAGCCCTGCCAGGAGGCTGCGGCCTAGGGG GGCCTGCCTCCCAGCCCTGCCATGAGGCTGCGGCCTAGGGG < 41bp 0.85006100787789 0.568642166567243 0.9046564 0.22868139 prediction 0.562837682621295 Functional Loss - CAPN10 ENSG00000142330 UTR3 Human protein_coding chr2:241538225 chr2:241538227 . . 0 23 hm5C_associated_SNPs_57655 0 0 2 LSM11 POSTAR2 ENCODE chr2:241538087-241538343
64251 chr5 156727761 156727761 1 + G T ESCA 156727759 + 156727739 156727779 41 GGTTCTGCAGCGAGGTGAAGCGGCTGTGCCATGCCGAGCGC GGTTCTGCAGCGAGGTGAAGCGTCTGTGCCATGCCGAGCGC < 41bp 0.781386245633214 0.44839664521272 0.8784 0.33998555 prediction 0.562772491266428 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156727759 chr5:156727761 synonymous SNV . 0 23 hm5C_associated_SNPs_57660 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr5:156727737-156727782
64251 chr12 53800433 53800433 1 + A T OV 53800429 + 53800409 53800449 41 TGATGGAATACATGATGACACAGCAGGTGGAGAGGAAGGAG TGATGGAATACATGATGACACAGCTGGTGGAGAGGAAGGAG < 41bp 0.781346670186899 0.465070510423866 0.2243875 0.094641626 prediction 0.562693340373799 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53800429 chr12:53800433 synonymous SNV . 0 25 hm5C_associated_SNPs_57669 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:53800375-53800449
64251 chr12 53800431 53800431 1 + G T UCEC 53800429 + 53800409 53800449 41 TGATGGAATACATGATGACACAGCAGGTGGAGAGGAAGGAG TGATGGAATACATGATGACACATCAGGTGGAGAGGAAGGAG < 41bp 0.781346670186899 0.459885114658205 0.2243875 0.19107461 prediction 0.562693340373799 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53800429 chr12:53800431 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_57670 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:53800375-53800449
64251 chr18 29122660 29122660 1 + G T SARC 29122658 + 29122638 29122678 41 AGAACACAGAAGCCTGCTTTCTGGTAGAGCTACCCAGTTTA AGAACACAGAAGCCTGCTTTCTTGTAGAGCTACCCAGTTTA < 41bp 0.781345223419334 0.448060696463288 0.5167457 0.37027478 prediction 0.562690446838668 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29122658 chr18:29122660 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_57671 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr18:29122639-29122666
64251 chr6 44392171 44392171 1 + G T UCEC 44392168 + 44392148 44392188 41 TTCTACAGGAAAGAGAATCCCGAGAACATCTCCGTTTAGGG TTCTACAGGAAAGAGAATCCCGATAACATCTCCGTTTAGGG < 41bp 0.781326407183416 0.405328849681889 0.6327695 0.38221058 prediction 0.562652814366832 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44392168 chr6:44392171 stopgain 0.998 1 24 hm5C_associated_SNPs_57674 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44392160-44392180
64251 chr2 198570406 198570406 1 + G C HNSC 198570405 + 198570385 198570425 41 ACGCGATTCTCCACTGGTACCGACGAGCACGGGCTGAAGAT ACGCGATTCTCCACTGGTACCCACGAGCACGGGCTGAAGAT < 41bp 0.796927989371275 0.515653274125081 0.23733428 0.11869094 prediction 0.562549430492388 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570405 chr2:198570406 nonsynonymous SNV 0.896 5 22 hm5C_associated_SNPs_57679 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585670 chr2:198570391-198570415
64251 chr14 74036458 74036458 1 + G T UCEC 74036455 + 74036435 74036475 41 TGGCCGTGGAGCTGGAGGTGCTGGATGGCCACGACCCCGAC TGGCCGTGGAGCTGGAGGTGCTGTATGGCCACGACCCCGAC < 41bp 0.791834404517195 0.510565682331671 0.87774575 0.36238343 prediction 0.562537444371047 Functional Loss - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74036455 chr14:74036458 nonsynonymous SNV 0.899 3 24 hm5C_associated_SNPs_57682 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr14:74036458-74036459
64251 chr1 118003128 118003128 1 + G T LUAD 118003126 + 118003106 118003146 41 TTCAGTGGAGTAGGGCGAAACTGGGGCTGGGCATCTGCAGG TTCAGTGGAGTAGGGCGAAACTTGGGCTGGGCATCTGCAGG < 41bp 0.857824738615645 0.576565169443408 0.8777607 0.25178462 prediction 0.562519138344473 Functional Loss - MAN1A2 ENSG00000198162 CDS Human protein_coding chr1:118003126 chr1:118003128 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_57684 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:118003120-118003140
64251 chr15 29367139 29367139 1 + G T LUSC 29367136 + 29367116 29367156 41 GTTTCCAGGTTTGCAATGGTCTGGAGCAGCCAAGGAAGCAG GTTTCCAGGTTTGCAATGGTCTGTAGCAGCCAAGGAAGCAG < 41bp 0.892630260081849 0.611389414175854 0.36332256 0.20611706 prediction 0.562481691811991 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29367136 chr15:29367139 stopgain 1.000 1 24 hm5C_associated_SNPs_57686 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr15:29367120-29367140
64251 chr17 58678246 58678246 1 + G T LUAD 58678244 + 58678224 58678264 41 ACCTTGCCATGTGGAAGAAACTGGGTAAGTTCCCTGGCTTG ACCTTGCCATGTGGAAGAAACTTGGTAAGTTCCCTGGCTTG < 41bp 0.855996408318003 0.574774795754572 0.92566556 0.83040863 prediction 0.562443225126862 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58678244 chr17:58678246 synonymous SNV . 0 23 hm5C_associated_SNPs_57688 0 0 2 PPIG POSTAR2 ENCODE chr17:58678141-58678250
64251 chr19 11350442 11350442 1 + G T SARC 11350440 + 11350420 11350460 41 CCCTGCTCTTCCATGGGACCCTGCAGCTGGGCCAGGCCCTC CCCTGCTCTTCCATGGGACCCTTCAGCTGGGCCAGGCCCTC < 41bp 0.781220245969468 0.461410056442213 0.047634423 0.031291485 prediction 0.562440491938936 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350440 chr19:11350442 synonymous SNV . 0 23 hm5C_associated_SNPs_57689 0 0 3 LARP4 POSTAR2 ENCODE chr19:11350417-11350464
64251 chr11 64854053 64854053 1 + G T LIHC 64854050 + 64854030 64854070 41 GAGAAGCTGGCCACAGTCAACTGGGCCCGGGCAGGACTGGG GAGAAGCTGGCCACAGTCAACTGTGCCCGGGCAGGACTGGG < 41bp 0.898224700941063 0.617028820540178 0.7787595 0.50006795 prediction 0.562391760801769 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854050 chr11:64854053 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57692 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:64854032-64854063
64251 chr8 104337269 104337269 1 + G T COAD 104337266 + 104337246 104337286 41 CATTACTTGGTTCTTAGCTGCAGGAAGAAAATGGAGTTGTG CATTACTTGGTTCTTAGCTGCAGTAAGAAAATGGAGTTGTG < 41bp 0.781191659628151 0.405191056400094 0.34057543 0.07424426 prediction 0.562383319256301 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104337266 chr8:104337269 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57694 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:104337228-104337272
64251 chr1 46812709 46812709 1 + G T LUSC 46812706 + 46812686 46812726 41 GCTTGACCTATGTGCAGCTCCTGGGGGAAAGACACTAGCGT GCTTGACCTATGTGCAGCTCCTGTGGGAAAGACACTAGCGT < 41bp 0.781173510004517 0.40953438136253 0.8820882 0.20166859 prediction 0.562347020009033 Functional Loss - NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46812706 chr1:46812709 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57697 0 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr1:46812686-46812718
64251 chr19 44514614 44514614 1 + G T UCEC 44514612 + 44514592 44514632 41 ATACAGGACAGAAACCTTCACAGAATGGGAAGTGTAAACAG ATACAGGACAGAAACCTTCACATAATGGGAAGTGTAAACAG < 41bp 0.814096441256143 0.532943283714192 0.09993133 0.039106667 prediction 0.5623063150839 Functional Loss - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514612 chr19:44514614 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_57700 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44514581-44514615
64251 chr12 3031560 3031560 1 + A T LUSC 3031556 + 3031536 3031576 41 AGCCAGGACTTCAGGAGCGTCTCCAAAAGCATGGTGAGGAC AGCCAGGACTTCAGGAGCGTCTCCTAAAGCATGGTGAGGAC < 41bp 0.781127120401423 0.426583839033742 0.9775624 0.82943964 prediction 0.562254240802846 Functional Loss - TULP3 ENSG00000078246 CDS Human protein_coding chr12:3031556 chr12:3031560 nonsynonymous SNV 0.876 1 25 hm5C_associated_SNPs_57704 0 0 1 GRWD1 POSTAR2 ENCODE chr12:3031483-3031566
64251 chr8 38109494 38109494 1 + G T rs372844778 38109492 + 38109472 38109512 41 ATCCCCAAAGAATCTGAGTTCTGCAGTAGCAGTAATACTAG ATCCCCAAAGAATCTGAGTTCTTCAGTAGCAGTAATACTAG < 41bp 0.84007438620744 0.558958001388249 0.26428217 0.28125674 prediction 0.562232769638382 Functional Loss - DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38109492 chr8:38109494 nonsynonymous SNV 0.765 0 23 hm5C_associated_SNPs_57706 0 0 4 BUD13 POSTAR2 ENCODE chr8:38109418-38109508
64251 chr7 73790501 73790501 1 + G T UCEC 73790499 + 73790479 73790519 41 CGGCCAACGAGAAGTACGCACAGGAGGTGGCGGGCCTGAAG CGGCCAACGAGAAGTACGCACATGAGGTGGCGGGCCTGAAG < 41bp 0.861753368957296 0.580656179206715 0.8624506 0.4350167 prediction 0.562194379501162 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790499 chr7:73790501 nonsynonymous SNV 0.542 3 23 hm5C_associated_SNPs_57708 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:73790489-73790516
64251 chr7 73098210 73098210 1 + G T UCEC 73098208 + 73098188 73098228 41 GCCCCTGTTGCTGGCGTTGCCCGGAAAGGCCGTAGAATTTG GCCCCTGTTGCTGGCGTTGCCCTGAAAGGCCGTAGAATTTG < 41bp 0.813098900554395 0.532020180842261 0.32703957 0.027170181 prediction 0.562157439424269 Functional Loss - BUD23 ENSG00000071462 CDS Human protein_coding chr7:73098208 chr7:73098210 nonsynonymous SNV 0.009 0 23 hm5C_associated_SNPs_57709 0 0 4 EFTUD2 POSTAR2 ENCODE chr7:73098195-73098255
64251 chr6 53787638 53787638 1 + G T rs41273890 53787635 + 53787615 53787655 41 CCTGTGTCTTCCTCTGCTGTCGAGACGTTCCTGTCTGCTTC CCTGTGTCTTCCTCTGCTGTCGATACGTTCCTGTCTGCTTC < 41bp 0.781056501402006 0.41378544234289 0.8780922 0.096063524 prediction 0.562113002804011 Functional Loss - LRRC1 ENSG00000137269 UTR3 Human protein_coding chr6:53787635 chr6:53787638 . . 0 24 hm5C_associated_SNPs_57710 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:53787615-53787644
64251 chrX 21887700 21887700 1 + G T UCEC 21887697 + 21887677 21887717 41 ATTGTCCTGTTACTAATGTGCAAGATTGGAATGAATGTTTA ATTGTCCTGTTACTAATGTGCAATATTGGAATGAATGTTTA < 41bp 0.780978182612061 0.411885705471224 0.05988729 0.029809207 prediction 0.561956365224123 Functional Loss - MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21887697 chrX:21887700 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_57721 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:21887700-21887720
64251 chr6 69665972 69665972 1 + A C STAD 69665968 + 69665948 69665988 41 AGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAG AGCCAGTGCTCAGTAACGTGCTCGCATGGGACTCAGCAGAG < 41bp 0.780971220642711 0.438365586617057 0.38398877 0.22804421 prediction 0.561942441285422 Functional Loss - ADGRB3 ENSG00000135298 CDS Human protein_coding chr6:69665968 chr6:69665972 nonsynonymous SNV 0.732 2 25 hm5C_associated_SNPs_57723 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr6:69665960-69665988
64251 chr22 45946418 45946418 1 + G T UCEC 45946415 + 45946395 45946435 41 ATCCACAACTGCTCCATCAACGAGACCTGCTTCAACATCCA ATCCACAACTGCTCCATCAACGATACCTGCTTCAACATCCA < 41bp 0.780965608670376 0.388870040859053 0.28255254 0.13876635 prediction 0.561931217340752 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45946415 chr22:45946418 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_57724 0 0 4 DDX55 POSTAR2 ENCODE chr22:45946369-45946430
64251 chr1 154962719 154962719 1 + G T UCEC 154962717 + 154962697 154962737 41 CTGAGCTGGAACAGTTTCTACAGGACACTATCAAGAGGTAC CTGAGCTGGAACAGTTTCTACATGACACTATCAAGAGGTAC < 41bp 0.838773262110253 0.557824101543541 0.24948207 0.18657336 prediction 0.561898321133424 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962717 chr1:154962719 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_57725 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr1:154962700-154962720
64251 chr3 155611436 155611436 1 + G T UCEC 155611434 + 155611414 155611454 41 GAGGGAACTGTTCGTGCAGTCTGAAATTTTCCCCTTGGAAA GAGGGAACTGTTCGTGCAGTCTTAAATTTTCCCCTTGGAAA < 41bp 0.780932580885944 0.463188360257981 0.042053252 0.08503312 prediction 0.561865161771888 Functional Loss - GMPS ENSG00000163655 CDS Human protein_coding chr3:155611434 chr3:155611436 stopgain 1.000 1 23 hm5C_associated_SNPs_57727 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155611329-155611485
64251 chr4 153809375 153809375 1 + G T UCEC 153809373 + 153809353 153809393 41 TGCCAAAGATTGAGCAGTCACAGCATCTCTTCCAAGCACAT TGCCAAAGATTGAGCAGTCACATCATCTCTTCCAAGCACAT < 41bp 0.780911292573779 0.466269718155651 0.026958406 0.012561262 prediction 0.561822585147558 Functional Loss - ARFIP1 ENSG00000164144 CDS Human protein_coding chr4:153809373 chr4:153809375 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57730 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:153809375-153809396
64251 chr3 40499409 40499409 1 + G T UCEC 40499407 + 40499387 40499427 41 AGGCGCTTCGTGGAGGTTGGCCGGGTGGCCTATGTCTCCTT AGGCGCTTCGTGGAGGTTGGCCTGGTGGCCTATGTCTCCTT < 41bp 0.87601839501325 0.595121406056089 0.48529992 0.04370925 prediction 0.561793977914321 Functional Loss - RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499407 chr3:40499409 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_57732 0 0 3 DDX3X POSTAR2 ENCODE chr3:40499379-40499409
64251 chr16 58426595 58426595 1 + G T COAD 58426592 + 58426572 58426612 41 GACGACATCCTGATGTCCCACGAGAAGCTGCCGGTGCGCAC GACGACATCCTGATGTCCCACGATAAGCTGCCGGTGCGCAC < 41bp 0.889648143838398 0.608790485120727 0.2843007 0.07370621 prediction 0.561715317435342 Functional Loss - GINS3 ENSG00000181938 CDS Human protein_coding chr16:58426592 chr16:58426595 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57738 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:58426561-58426599
64251 chr2 135810011 135810011 1 + G T UCEC 135810008 + 135809988 135810028 41 CCCTTCCCGCAGCCCGAATCCGAGGTATTTGAGATCACGGA CCCTTCCCGCAGCCCGAATCCGATGTATTTGAGATCACGGA < 41bp 0.780853463753455 0.403261063440682 0.91925263 0.41915315 prediction 0.56170692750691 Functional Loss - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135810008 chr2:135810011 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57740 0 0 7 BUD13 POSTAR2 ENCODE chr2:135809964-135810030
64251 chr11 70279240 70279240 1 + A T LUAD 70279236 + 70279216 70279256 41 TCCTTCAAGGCAGAGCTGAGCTACAGAGGCCCTGTGAGTGG TCCTTCAAGGCAGAGCTGAGCTACTGAGGCCCTGTGAGTGG < 41bp 0.841958878306541 0.561115167562568 0.5379755 0.1813179 prediction 0.561687421487946 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279236 chr11:70279240 stopgain 0.063 0 25 hm5C_associated_SNPs_57742 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:70279220-70279240
64251 chr21 48068527 48068527 1 + G T OV 48068524 + 48068504 48068544 41 CTGTGCACACTATGCGCGGCCTAGAGCGGTGAGTGGGGTCT CTGTGCACACTATGCGCGGCCTATAGCGGTGAGTGGGGTCT < 41bp 0.780837911160838 0.409004113886156 0.11533803 0.18928903 prediction 0.561675822321677 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068524 chr21:48068527 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_57744 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chr12 53776785 53776785 1 + C T BLCA 53776783 + 53776763 53776803 41 TGGATCATCAGGGACCAACTCTCAAGGCCAGACACCCCAGA TGGATCATCAGGGACCAACTCTTAAGGCCAGACACCCCAGA < 41bp 0.78081092573889 0.498812525821235 0.17742288 0.16662115 prediction 0.56162185147778 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776783 chr12:53776785 stopgain 1.000 1 23 hm5C_associated_SNPs_57749 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53776736-53776791
64251 chr8 30614366 30614366 1 + G T UCEC 30614364 + 30614344 30614384 41 GAACTTGCCTAAACCTTTAACTGAATTTCCGTCTCCTGCTG GAACTTGCCTAAACCTTTAACTTAATTTCCGTCTCCTGCTG < 41bp 0.780808673049171 0.477896628662125 0.17299592 0.13771632 prediction 0.561617346098342 Functional Loss - UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30614364 chr8:30614366 . 0.001 0 23 hm5C_associated_SNPs_57750 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:30614355-30614376
64251 chr6 43039978 43039978 1 + G T rs57512910 43039976 + 43039956 43039996 41 AGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGACAGGTC AGACCCTGGAGGAATGTGCCCTTCGGTCCCGGAGACAGGTC < 41bp 0.780793010145357 0.447189314817201 0.14669523 0.059805065 prediction 0.561586020290713 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43039976 chr6:43039978 synonymous SNV . 0 23 hm5C_associated_SNPs_57751 0 0 5 BUD13 POSTAR2 ENCODE chr6:43039948-43039993
64251 chr13 53030120 53030120 1 + G T rs150469542 53030117 + 53030097 53030137 41 AGGGACCGACTGCGCCTGCGCTGGGTCCTCCGCCTCTTAGG AGGGACCGACTGCGCCTGCGCTGTGTCCTCCGCCTCTTAGG < 41bp 0.901684221173839 0.620891813786344 0.85345185 0.19599402 prediction 0.561584814774989 Functional Loss - CKAP2 ENSG00000136108 UTR5 Human protein_coding chr13:53030117 chr13:53030120 . . 0 24 hm5C_associated_SNPs_57752 0 0 2 EFTUD2 POSTAR2 ENCODE chr13:53030061-53030127
64251 chr1 230415924 230415924 1 + G T rs3213494 230415922 + 230415902 230415942 41 CGGGAGAAGGGGCCAGAGCCCGGTGGGGCCAGTTTCTCACA CGGGAGAAGGGGCCAGAGCCCGTTGGGGCCAGTTTCTCACA < 41bp 0.780787727293334 0.449566950392266 0.881926 0.23626739 prediction 0.561575454586668 Functional Loss - GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415922 chr1:230415924 . . 0 23 hm5C_associated_SNPs_57753 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:230415884-230415931
64251 chr1 150923107 150923107 1 + G T THCA 150923104 + 150923084 150923124 41 CTGCAGCTATACCTGTCTGTCTCGAGTCAGACCTATGAGGA CTGCAGCTATACCTGTCTGTCTCTAGTCAGACCTATGAGGA < 41bp 0.888193886677646 0.60741166932471 0.30226573 0.40394557 prediction 0.561564434705873 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923104 chr1:150923107 nonsynonymous SNV 0.860 4 24 hm5C_associated_SNPs_57754 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:150923093-150923115
64251 chr4 166996084 166996084 1 + C T COAD 166996082 + 166996062 166996102 41 TGTCAGCACGAATGTGTCAACACGATGGGGAGCTACATGTG TGTCAGCACGAATGTGTCAACATGATGGGGAGCTACATGTG < 41bp 0.782718830388054 0.501971894484775 0.30607843 0.26926744 prediction 0.561493871806559 Functional Loss - TLL1 ENSG00000038295 CDS Human protein_coding chr4:166996082 chr4:166996084 nonsynonymous SNV 0.835 4 23 hm5C_associated_SNPs_57757 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:166996084-166996119
64251 chr6 106967940 106967940 1 + G C SARC 106967936 + 106967916 106967956 41 GTGGGAAGTGAGTGTCCATCCAGAGTCCTCGTCCAGGTCAG GTGGGAAGTGAGTGTCCATCCAGACTCCTCGTCCAGGTCAG < 41bp 0.798423725306159 0.517689799096681 0.54240197 0.3465617 prediction 0.561467852418958 Functional Loss - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106967936 chr6:106967940 nonsynonymous SNV 0.820 3 25 hm5C_associated_SNPs_57759 0 0 2 EIF3H POSTAR2 ENCODE chr6:106967909-106967961
64251 chr1 1387814 1387814 1 + G T LUAD 1387811 + 1387791 1387831 41 GACCGGGACAAAGTGACAGCCACGGTAAACATACTCATAAA GACCGGGACAAAGTGACAGCCACTGTAAACATACTCATAAA < 41bp 0.780716017438747 0.400327237007636 0.7992524 0.20363885 prediction 0.561432034877495 Functional Loss - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387811 chr1:1387814 synonymous SNV . 0 24 hm5C_associated_SNPs_57761 0 0 1 BUD13 POSTAR2 ENCODE chr1:1387784-1387855
64251 chr16 30976009 30976009 1 + G T SKCM 30976007 + 30975987 30976027 41 CTTTTCCCGCCGCCACTTCTCTGCATCTTCAGCCTCCACAA CTTTTCCCGCCGCCACTTCTCTTCATCTTCAGCCTCCACAA < 41bp 0.859161373067545 0.578459523077638 0.2612161 0.08790663 prediction 0.561403699979812 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976007 chr16:30976009 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_57762 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:30976000-30976020
64251 chr17 30810031 30810031 1 + A C rs527574896 30810027 + 30810007 30810047 41 GAGTAGAGGGGAGATGTTTTCTCAAACTTAGGGCAGTCCTG GAGTAGAGGGGAGATGTTTTCTCACACTTAGGGCAGTCCTG < 41bp 0.780648439867525 0.455274977149671 0.12371382 0.050973535 prediction 0.561296879735051 Functional Loss - PSMD11 ENSG00000108671 UTR3 Human protein_coding chr17:30810027 chr17:30810031 . . 0 25 hm5C_associated_SNPs_57771 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:30810001-30810037
64251 chr8 21777226 21777226 1 + G T rs543608753 21777223 + 21777203 21777243 41 CGGCGGCGGCGGCAGCGGCTCCGGCCGAGGTGCGCGCTGGG CGGCGGCGGCGGCAGCGGCTCCGTCCGAGGTGCGCGCTGGG < 41bp 0.780642408204252 0.462188482689245 0.85811937 0.36223584 prediction 0.561284816408504 Functional Loss - XPO7 ENSG00000130227 UTR5 Human protein_coding chr8:21777223 chr8:21777226 . . 0 24 hm5C_associated_SNPs_57772 0 0 1 GEMIN5 POSTAR2 ENCODE chr8:21777200-21777307
64251 chr19 58697164 58697164 1 + G T LGG 58697162 + 58697142 58697182 41 CTCAAACAGAAGTCCCTGTACAGGGAAGTGATGCTGGAGAA CTCAAACAGAAGTCCCTGTACATGGAAGTGATGCTGGAGAA < 41bp 0.816019391758509 0.535389148886847 0.81262934 0.18827325 prediction 0.561260485743325 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58697162 chr19:58697164 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57776 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58697127-58697165
64251 chr19 54080062 54080062 1 + G T BLCA 54080060 + 54080040 54080080 41 AGTAAATCCCTTGGCCGTAACTGGATATGTGAAGGTACGCT AGTAAATCCCTTGGCCGTAACTTGATATGTGAAGGTACGCT < 41bp 0.780626217158144 0.475584910630133 0.7506268 0.3016559 prediction 0.561252434316288 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080060 chr19:54080062 nonsynonymous SNV 0.147 0 23 hm5C_associated_SNPs_57777 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54080041-54080062
64251 chr4 184129152 184129152 1 + G T COAD 184129150 + 184129130 184129170 41 GAAAACAATGGAGGGGGGAACAGGAGAAGATGCTCAAGGAC GAAAACAATGGAGGGGGGAACATGAGAAGATGCTCAAGGAC < 41bp 0.827675461122386 0.54706094095666 0.91243774 0.89053845 prediction 0.561229040331452 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184129150 chr4:184129152 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_57783 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr4:184129138-184129159
64251 chr4 1244682 1244682 1 + A C rs11554784 1244678 + 1244658 1244698 41 ATCACATAAGGCTTTGGGTCCTGCAGGTGGGGCTGCCATGA ATCACATAAGGCTTTGGGTCCTGCCGGTGGGGCTGCCATGA < 41bp 0.780581752807975 0.405247446859141 0.24661928 0.12369689 prediction 0.561163505615951 Functional Loss - CTBP1-AS2 ENSG00000196810;ENSG00000196810 ncRNA_exonic;splicing Human other chr4:1244678 chr4:1244682 . . 0 25 hm5C_associated_SNPs_57793 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:1244668-1244697
64251 chr3 151075076 151075076 1 + G T UCEC 151075074 + 151075054 151075094 41 CCTGGCAGGAAGTTATACAACAGGACTGTGTGTCTGCATCG CCTGGCAGGAAGTTATACAACATGACTGTGTGTCTGCATCG < 41bp 0.780571195974469 0.464583210927219 0.3318944 0.027071714 prediction 0.561142391948939 Functional Loss - MED12L ENSG00000144893 CDS Human protein_coding chr3:151075074 chr3:151075076 stopgain 0.999 1 23 hm5C_associated_SNPs_57795 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr3:151075060-151075080
64251 chr14 100996231 100996231 1 + G T LUAD 100996228 + 100996208 100996248 41 GTGACGGGCAGCGCCGATGGCCGGGTCCTGATGTACAGCTT GTGACGGGCAGCGCCGATGGCCGTGTCCTGATGTACAGCTT < 41bp 0.780552060550966 0.40168656901912 0.80660236 0.22067305 prediction 0.561104121101933 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996228 chr14:100996231 synonymous SNV . 0 24 hm5C_associated_SNPs_57799 0 0 1 PUM2 POSTAR2 ENCODE chr14:100996201-100996250
64251 chrX 102612700 102612700 1 + G T UCEC 102612697 + 102612677 102612717 41 AGCCAAAGCCTGAGGAAAAGCCAGAAGAGGAGGAGAAGCTA AGCCAAAGCCTGAGGAAAAGCCATAAGAGGAGGAGAAGCTA < 41bp 0.880708447613001 0.600158641476695 0.37220722 0.40633637 prediction 0.561099612272612 Functional Loss - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612697 chrX:102612700 stopgain 0.973 0 24 hm5C_associated_SNPs_57800 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:102612694-102612718
64251 chr11 68704026 68704026 1 + G C GBM 68704022 + 68704002 68704042 41 AGGCTGCAGCACCTGCCAGACAGGGCCGGAAGAAGCCGGCT AGGCTGCAGCACCTGCCAGACAGGCCCGGAAGAAGCCGGCT < 41bp 0.780540792980421 0.481310716002203 0.6760155 0.24994132 prediction 0.561081585960842 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68704022 chr11:68704026 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_57804 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68704026-68704057
64251 chr12 133780178 133780178 1 + G T UCEC 133780176 + 133780156 133780196 41 TGTACATCAGAGAACTCATACAGGAGAGAAACCCTATAGTT TGTACATCAGAGAACTCATACATGAGAGAAACCCTATAGTT < 41bp 0.780537260374714 0.494540430059937 0.5291784 0.20875546 prediction 0.561074520749429 Functional Loss - ZNF268 ENSG00000090612 CDS Human protein_coding chr12:133780176 chr12:133780178 stopgain 0.854 0 23 hm5C_associated_SNPs_57805 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:133780176-133780211
64251 chr22 42475909 42475909 1 + G T UCEC 42475906 + 42475886 42475926 41 AGGCCGGAGCCTGGTACCGTCGAGGTCAGTCATCGTTACCC AGGCCGGAGCCTGGTACCGTCGATGTCAGTCATCGTTACCC < 41bp 0.899340056413697 0.618805152401221 0.8606509 0.3997018 prediction 0.561069808024953 Functional Loss - SMDT1 ENSG00000183172 CDS Human protein_coding chr22:42475906 chr22:42475909 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_57806 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:42475892-42475916
64251 chr3 37988645 37988645 1 + A C LIHC 37988641 + 37988621 37988661 41 TGATTACAATGTGGAGGCCCCTCCACCCAGCAGCCCCAGTG TGATTACAATGTGGAGGCCCCTCCCCCCAGCAGCCCCAGTG < 41bp 0.780534545643123 0.352034655505556 0.90205526 0.3134536 prediction 0.561069091286245 Functional Loss - CTDSPL ENSG00000144677 CDS Human protein_coding chr3:37988641 chr3:37988645 synonymous SNV . 0 25 hm5C_associated_SNPs_57807 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:37988627-37988650
64251 chr20 3893223 3893223 1 + G T UCEC 3893220 + 3893200 3893240 41 CCAAAGTGGATAAACTAGTACGAGATATTTATGGAGGGGAC CCAAAGTGGATAAACTAGTACGATATATTTATGGAGGGGAC < 41bp 0.780530741239871 0.400484072105834 0.8921528 0.40907645 prediction 0.561061482479742 Functional Loss - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3893220 chr20:3893223 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_57809 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:3893135-3893278
64251 chr3 25502752 25502752 1 + C T UCEC 25502750 + 25502730 25502770 41 CCCATCTCCACTTCCTCCCCCTCGAGTGTACAAACCCTGCT CCCATCTCCACTTCCTCCCCCTTGAGTGTACAAACCCTGCT < 41bp 0.787056129025747 0.506537109618463 0.019450873 0.009957224 prediction 0.561038038814568 Functional Loss - RARB ENSG00000077092 CDS Human protein_coding chr3:25502750 chr3:25502752 stopgain 0.998 1 23 hm5C_associated_SNPs_57812 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:25502719-25502768
64251 chr1 36762298 36762298 1 + C T UCEC 36762296 + 36762276 36762316 41 ATCGAGAGAATCAGTGGATTCCCGAGACTCCAGTCACTCAA ATCGAGAGAATCAGTGGATTCCTGAGACTCCAGTCACTCAA < 41bp 0.789388593225177 0.508872962156496 0.46399903 0.48038447 prediction 0.561031262137362 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36762296 chr1:36762298 stopgain 0.999 1 23 hm5C_associated_SNPs_57814 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:36762194-36762299
64251 chr2 207436495 207436495 1 + G T LIHC 207436492 + 207436472 207436512 41 AAGAAATGTTCCCTCTCCAACGGGGCTCACTGCAGCGACGG AAGAAATGTTCCCTCTCCAACGGTGCTCACTGCAGCGACGG < 41bp 0.780508504943696 0.391210758753265 0.96778536 0.9434202 prediction 0.561017009887391 Functional Loss - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207436492 chr2:207436495 synonymous SNV . 0 24 hm5C_associated_SNPs_57816 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:207436450-207436503
64251 chr3 119242511 119242511 1 + G T OV 119242508 + 119242488 119242528 41 AGAAAATTGAAAGTAGTTTACAGGAAGATGAACCTGAGAAT AGAAAATTGAAAGTAGTTTACAGTAAGATGAACCTGAGAAT < 41bp 0.882218235009191 0.60171412319537 0.683679 0.10395789 prediction 0.561008223627643 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119242508 chr3:119242511 stopgain 0.077 0 24 hm5C_associated_SNPs_57817 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr3:119242489-119242554
64251 chr7 140374007 140374007 1 + G T SARC 140374004 + 140373984 140374024 41 GATCAAATGCAGGGGTGTCTCGGGCTCAGGTCCCTGGCCAC GATCAAATGCAGGGGTGTCTCGGTCTCAGGTCCCTGGCCAC < 41bp 0.902635097183667 0.622144928576846 0.9335551 0.7363196 prediction 0.560980337213642 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140374004 chr7:140374007 nonsynonymous SNV 0.036 0 24 hm5C_associated_SNPs_57820 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140373987-140374012
64251 chr8 87543407 87543407 1 + C T UCEC 87543405 + 87543385 87543425 41 TGTTTCCAGCAAGAAGCTAACTCGACCACTGGTGATGAAAA TGTTTCCAGCAAGAAGCTAACTTGACCACTGGTGATGAAAA < 41bp 0.787599888239296 0.507122029591698 0.090634674 0.123218805 prediction 0.560955717295196 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87543405 chr8:87543407 stopgain 1.000 1 23 hm5C_associated_SNPs_57823 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:87543400-87543420
64251 chr19 49671848 49671848 1 + G T LUAD 49671846 + 49671826 49671866 41 GGTACCGGTGGCGCGGTGACCCGGAGGACGGGGTCCAGTTT GGTACCGGTGGCGCGGTGACCCTGAGGACGGGGTCCAGTTT < 41bp 0.869667236977821 0.589190483707776 0.9306898 0.23402882 prediction 0.56095350654009 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671846 chr19:49671848 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_57824 0 0 1 DDX24 POSTAR2 ENCODE chr19:49671822-49671854
64251 chr14 21464391 21464391 1 + C T LUSC 21464389 + 21464369 21464409 41 GTCCCCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGCC GTCCCCATGAACTCCCTTGTCCTCAGTTGACCAACCTGGCC < 41bp 0.780550567582248 0.500089564384308 0.13005838 0.1688075 prediction 0.56092200639588 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464389 chr14:21464391 synonymous SNV . 0 23 hm5C_associated_SNPs_57826 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:21464351-21464393
64251 chr17 21217491 21217491 1 + G T rs201112044 21217488 + 21217468 21217508 41 TTCTTCACCTTGCACAAAACCAAGAAGACGGACATTGCTGC TTCTTCACCTTGCACAAAACCAATAAGACGGACATTGCTGC < 41bp 0.780459073086004 0.408367089097044 0.31664875 0.3047629 prediction 0.560918146172008 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21217488 chr17:21217491 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_57827 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:21217479-21217513
64251 chrX 135288623 135288623 1 + G T LUAD 135288621 + 135288601 135288641 41 AAGTTTGACTGCCACTACTGCAGGGATCCCTTGCAGGGGAA AAGTTTGACTGCCACTACTGCATGGATCCCTTGCAGGGGAA < 41bp 0.780458571065188 0.451089425644562 0.90349466 0.36268318 prediction 0.560917142130376 Functional Loss - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135288621 chrX:135288623 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_57828 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:135288579-135288633
64251 chr11 64795066 64795066 1 + G T LUAD 64795063 + 64795043 64795083 41 CACTACACAGTGTCGGACCCCAGGACTCACCCCAAGGGCTA CACTACACAGTGTCGGACCCCAGTACTCACCCCAAGGGCTA < 41bp 0.895980347003243 0.615541999765858 0.2984445 0.18394923 prediction 0.560876694474772 Functional Loss - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64795063 chr11:64795066 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_57832 0 0 2 DDX3X POSTAR2 ENCODE chr11:64794954-64795093
64251 chr12 82870468 82870468 1 + C T SKCM 82870466 + 82870446 82870486 41 CTACTACGAGAAGTATAAGCCTCGAATGAATGAGCTGGAAG CTACTACGAGAAGTATAAGCCTTGAATGAATGAGCTGGAAG < 41bp 0.78102200834759 0.500626624402884 0.84251606 0.09001145 prediction 0.560790767889413 Functional Loss - METTL25 ENSG00000127720 CDS Human protein_coding chr12:82870466 chr12:82870468 stopgain 1.000 1 23 hm5C_associated_SNPs_57836 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:82870433-82870471
64251 chr1 212788549 212788549 1 + G T HNSC 212788547 + 212788527 212788567 41 GCCACCGGATGTCCTCTGCGCTGGAATCAGTCACTGTCAGC GCCACCGGATGTCCTCTGCGCTTGAATCAGTCACTGTCAGC < 41bp 0.857799075235127 0.577412043466409 0.42895412 0.2579612 prediction 0.560774063537435 Functional Loss - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212788547 chr1:212788549 synonymous SNV . 0 23 hm5C_associated_SNPs_57837 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:212788372-212788562
64251 chr12 54428118 54428118 1 + G C CESC 54428117 + 54428097 54428137 41 CGCTACCAGACTCTGGAACTCGAGAAAGAATTCCACTTTAA CGCTACCAGACTCTGGAACTCCAGAAAGAATTCCACTTTAA < 41bp 0.815205969079298 0.534829544578819 0.918218 0.67201215 prediction 0.560752849000958 Functional Loss - HOXC5 ENSG00000172789;ENSG00000273049 CDS Human other chr12:54428117 chr12:54428118 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_57838 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:54428108-54428123
64251 chr17 27005167 27005167 1 + A C UCEC 27005163 + 27005143 27005183 41 GGAAAGGGCCCAGCACAATTCAGAAGATCAAAGAGGCCCTG GGAAAGGGCCCAGCACAATTCAGACGATCAAAGAGGCCCTG < 41bp 0.780369264250414 0.405045875347108 0.29103494 0.2598426 prediction 0.560738528500827 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27005163 chr17:27005167 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_57840 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:27005160-27005180
64251 chr2 234106858 234106858 1 + G T UCEC 234106856 + 234106836 234106876 41 AGCAGACCTTGTCCCCTGACCAGCAGCCCACAGCCTGGAGC AGCAGACCTTGTCCCCTGACCATCAGCCCACAGCCTGGAGC < 41bp 0.780358446789111 0.438475927431105 0.31407613 0.14947757 prediction 0.560716893578221 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234106856 chr2:234106858 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_57842 0 0 1 FASTKD2 POSTAR2 ENCODE chr2:234106806-234106867
64251 chr19 45175887 45175887 1 + G T LUAD 45175884 + 45175864 45175904 41 ACAGCCTCAATCCTGGTCCTCTGGATGCTCCAAGGCTCCCA ACAGCCTCAATCCTGGTCCTCTGTATGCTCCAAGGCTCCCA < 41bp 0.902384411855408 0.622041016860654 0.40037066 0.16200423 prediction 0.560686789989508 Functional Loss - CEACAM19 ENSG00000186567 CDS Human protein_coding chr19:45175884 chr19:45175887 nonsynonymous SNV 0.032 1 24 hm5C_associated_SNPs_57846 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45175880-45175909
64251 chr3 12858039 12858039 1 + G T UCEC 12858036 + 12858016 12858056 41 TGTGTGGCTGACTCTTTCTACAAGATTGCAGCCGAGGCCCT TGTGTGGCTGACTCTTTCTACAATATTGCAGCCGAGGCCCT < 41bp 0.903470447932243 0.623129552217841 0.09782836 0.018691897 prediction 0.560681791428804 Functional Loss - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858036 chr3:12858039 nonsynonymous SNV 0.897 4 24 hm5C_associated_SNPs_57847 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:12858013-12858040
64251 chr20 11903702 11903702 1 + G T LUSC 11903699 + 11903679 11903719 41 GTTCTAGGAAAGGCACTTTACTTGATCCGCATACCCACAAT GTTCTAGGAAAGGCACTTTACTTTATCCGCATACCCACAAT < 41bp 0.780324144191742 0.413403597525882 0.099663734 0.036322802 prediction 0.560648288383485 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903699 chr20:11903702 nonsynonymous SNV 0.991 5 24 hm5C_associated_SNPs_57851 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:11903665-11903716
64251 chr16 21611123 21611123 1 + G C KIRC 21611122 + 21611102 21611142 41 GCTGGCGCGGAGGATGTGGACGCTGCGGAGCCCGCTCACCC GCTGGCGCGGAGGATGTGGACCCTGCGGAGCCCGCTCACCC < 41bp 0.803223059501165 0.522920537529806 0.24808535 0.17480177 prediction 0.560605043942716 Functional Loss - METTL9 ENSG00000197006 CDS Human protein_coding chr16:21611122 chr16:21611123 synonymous SNV . 0 22 hm5C_associated_SNPs_57854 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:21611064-21611129
64251 chr14 58831175 58831175 1 + C T UCEC 58831173 + 58831153 58831193 41 TAAGAAAGAAGCCGAAAAATCTCCAAAAGGAAAGGGAAGAC TAAGAAAGAAGCCGAAAAATCTTCAAAAGGAAAGGGAAGAC < 41bp 0.780290614376438 0.489488272166629 0.9586309 0.3866673 prediction 0.560581228752876 Functional Loss - ARID4A ENSG00000032219 CDS Human protein_coding chr14:58831173 chr14:58831175 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_57855 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:58831173-58831194
64251 chr2 32289037 32289037 1 + A C LUAD 32289033 + 32289013 32289053 41 CGGCCCCTCCGCCCGAGTCGCCGCATAAGCGGAACCTGTAC CGGCCCCTCCGCCCGAGTCGCCGCCTAAGCGGAACCTGTAC < 41bp 0.780278776579794 0.392657640421253 0.34600323 0.13000941 prediction 0.560557553159587 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32289033 chr2:32289037 nonsynonymous SNV 0.229 3 25 hm5C_associated_SNPs_57857 0 0 1 BUD13 POSTAR2 ENCODE chr2:32288990-32289038
64251 chr2 239142244 239142244 1 + G T rs147992554 239142241 + 239142221 239142261 41 TGTCTACATGCCTTCTCATTCAAGAATTCGTCATCACGCAT TGTCTACATGCCTTCTCATTCAATAATTCGTCATCACGCAT < 41bp 0.825820033865344 0.545548452521354 0.6977732 0.14290804 prediction 0.56054316268798 Functional Loss - LOC643387 ENSG00000225057 ncRNA_exonic Human processed_transcript chr2:239142241 chr2:239142244 . . 0 24 hm5C_associated_SNPs_57859 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr2:239142222-239142244
64251 chr1 206566223 206566223 1 + A C LIHC 206566219 + 206566199 206566239 41 CGCATTGAGGAGAAACATGTCCGGAGGAGCTCAGTGAAGAA CGCATTGAGGAGAAACATGTCCGGCGGAGCTCAGTGAAGAA < 41bp 0.780270597011178 0.373344695198979 0.744447 0.368293 prediction 0.560541194022357 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566219 chr1:206566223 synonymous SNV . 0 25 hm5C_associated_SNPs_57861 0 0 4 DDX24 POSTAR2 ENCODE chr1:206566220-206566262
64251 chr5 132412504 132412504 1 + G T UCEC 132412501 + 132412481 132412521 41 TCTCAGGAGTGTGAGAAACTCAAGAAATTGATGAGTGCAAA TCTCAGGAGTGTGAGAAACTCAATAAATTGATGAGTGCAAA < 41bp 0.887703140255396 0.607467899999617 0.870685 0.24047315 prediction 0.560470480511558 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132412501 chr5:132412504 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_57869 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:132412352-132412590
64251 chr2 26950582 26950582 1 + A T LUAD 26950578 + 26950558 26950598 41 ACGGATGGCGGCAAGGTGTTCTGCATGTTCTACGCGCTGCT ACGGATGGCGGCAAGGTGTTCTGCTTGTTCTACGCGCTGCT < 41bp 0.780195203351134 0.475371763497998 0.34558088 0.53829616 prediction 0.560390406702267 Functional Loss - KCNK3 ENSG00000171303 CDS Human protein_coding chr2:26950578 chr2:26950582 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_57871 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:26950582-26950615
64251 chr6 43399880 43399880 1 + G T SARC 43399877 + 43399857 43399897 41 CTTGTCTTCCCCCTTGTCCCCAGGAGTCCAGATTACATCCT CTTGTCTTCCCCCTTGTCCCCAGTAGTCCAGATTACATCCT < 41bp 0.780194546647159 0.39392237024016 0.94615436 0.14821339 prediction 0.560389093294319 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43399877 chr6:43399880 nonsynonymous SNV 0.203 3 24 hm5C_associated_SNPs_57872 0 0 2 SF3B4 POSTAR2 ENCODE chr6:43399822-43399883
64251 chr1 223943318 223943318 1 + G T PRAD 223943315 + 223943295 223943335 41 CGGCGGCAGAGGAAGATGGGCGAGGACATGCACACCATCGG CGGCGGCAGAGGAAGATGGGCGATGACATGCACACCATCGG < 41bp 0.78018432441909 0.397611877243898 0.8214059 0.385389 prediction 0.56036864883818 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943315 chr1:223943318 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_57873 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:223943283-223943330
64251 chr7 141490554 141490554 1 + G T LUAD 141490552 + 141490532 141490572 41 ACCTGAGTCTCTGGTGCCTTCTGGGCTACTTTATAATCAAT ACCTGAGTCTCTGGTGCCTTCTTGGCTACTTTATAATCAAT < 41bp 0.780172287488841 0.453135931745989 0.1854626 0.03687364 prediction 0.560344574977681 Functional Loss - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490552 chr7:141490554 synonymous SNV . 0 23 hm5C_associated_SNPs_57875 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:141490507-141490558
64251 chr15 42133082 42133082 1 + G T GBM 42133079 + 42133059 42133099 41 CGGGCTGGGGAGTTCCGGCGCGAGAGCTTCTCACTGAGCCC CGGGCTGGGGAGTTCCGGCGCGATAGCTTCTCACTGAGCCC < 41bp 0.780172282245479 0.437068889207493 0.9115224 0.8144939 prediction 0.560344564490958 Functional Loss - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42133079 chr15:42133082 nonsynonymous SNV 0.845 0 24 hm5C_associated_SNPs_57876 0 0 4 DDX24 POSTAR2 ENCODE chr15:42133025-42133086
64251 chr8 27528509 27528509 1 + A C SKCM 27528505 + 27528485 27528525 41 AGAGGCCCGAAAGGAGACCCCGGCAGCTTGGGCCCCCTGGG AGAGGCCCGAAAGGAGACCCCGGCCGCTTGGGCCCCCTGGG < 41bp 0.898854701668019 0.618693770171272 0.7365042 0.40180248 prediction 0.560321862993494 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27528505 chr8:27528509 nonsynonymous SNV 0.013 1 25 hm5C_associated_SNPs_57879 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27528498-27528550
64251 chr10 92654638 92654638 1 + G T SARC 92654636 + 92654616 92654656 41 GCCCTCAATTTGATGCAAATCTGCAAAGGAAAGGTATGGTT GCCCTCAATTTGATGCAAATCTTCAAAGGAAAGGTATGGTT < 41bp 0.818182624934778 0.538029315635413 0.23884317 0.35381702 prediction 0.56030661859873 Functional Loss - RPP30 ENSG00000148688 CDS Human protein_coding chr10:92654636 chr10:92654638 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_57881 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:92654537-92654639
64251 chr18 9533746 9533746 1 + G T LUAD 9533743 + 9533723 9533763 41 GAGACTGAGGAGTACTCCTCCGAGAGCGAGAGCGAGAGTGA GAGACTGAGGAGTACTCCTCCGATAGCGAGAGCGAGAGTGA < 41bp 0.896142306259401 0.615992111800033 0.8935882 0.38457644 prediction 0.560300388918737 Functional Loss - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9533743 chr18:9533746 nonsynonymous SNV 0.266 0 24 hm5C_associated_SNPs_57883 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:9533746-9533782
64251 chr1 14107971 14107971 1 + G T LUSC 14107968 + 14107948 14107988 41 ACACATCACGAGTTTGAAAGCGGGACTCTGAGGCCCCAGAA ACACATCACGAGTTTGAAAGCGGTACTCTGAGGCCCCAGAA < 41bp 0.885327286106787 0.605218529505446 0.9078165 0.416876 prediction 0.560217513202682 Functional Loss - PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14107968 chr1:14107971 synonymous SNV . 0 24 hm5C_associated_SNPs_57889 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:14107954-14107985
64251 chr2 101604630 101604630 1 + A T LUSC 101604626 + 101604606 101604646 41 GCAGCTACAGCAAAGGTCAGCTGCAGTGACTCAGCCCCAGC GCAGCTACAGCAAAGGTCAGCTGCTGTGACTCAGCCCCAGC < 41bp 0.78007420981269 0.471993198616723 0.45383057 0.46728104 prediction 0.560148419625381 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101604626 chr2:101604630 synonymous SNV . 0 25 hm5C_associated_SNPs_57896 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101604623-101604709
64251 chr6 43026954 43026954 1 - C G CESC 43026955 - 43026935 43026975 41 AGATGGGGTCTGCGGGCATGCGAGGCGGGAGTTGCGAGTCT AGATGGGGTCTGCGGGCATGCCAGGCGGGAGTTGCGAGTCT < 41bp 0.796541329491453 0.516493329416742 0.91117346 0.8925376 prediction 0.56009600014942 Functional Loss - MRPL2 ENSG00000112651 CDS Human protein_coding chr6:43026955 chr6:43026954 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_57902 0 0 1 EFTUD2 POSTAR2 ENCODE chr6:43026879-43026955
64251 chr7 44799010 44799010 1 + G C LUAD 44799006 + 44798986 44799026 41 GGCACAGGCTGCCCCTGCAGCAGGGCATGACCCAGTCCCTG GGCACAGGCTGCCCCTGCAGCAGGCCATGACCCAGTCCCTG < 41bp 0.780030342776073 0.482460318253967 0.92213154 0.68923855 prediction 0.560060685552145 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44799006 chr7:44799010 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_57906 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:44798977-44799030
64251 chr17 29095934 29095934 1 + G T LUAD 29095931 + 29095911 29095951 41 TGACCTCAATCAAACAAAACCTGGAAATTTCCCGTCCCTTG TGACCTCAATCAAACAAAACCTGTAAATTTCCCGTCCCTTG < 41bp 0.780013316198907 0.413702477278072 0.0437454 0.037071258 prediction 0.560026632397813 Functional Loss - SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29095931 chr17:29095934 . . 0 24 hm5C_associated_SNPs_57908 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221659 chr17:29095920-29095940
64251 chr10 114173039 114173039 1 + C T STAD 114173037 + 114173017 114173057 41 CACATTGTTTCCCGCGGTGCCTCGACTCCTTAACAGGATCT CACATTGTTTCCCGCGGTGCCTTGACTCCTTAACAGGATCT < 41bp 0.791573021368621 0.511576477578242 0.106978714 0.04865244 prediction 0.559993087580757 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114173037 chr10:114173039 stopgain 0.970 1 23 hm5C_associated_SNPs_57911 0 0 2 PPIG POSTAR2 ENCODE chr10:114173013-114173065
64251 chr6 27777970 27777970 1 + A C STAD 27777966 + 27777946 27777986 41 CCACCGGCGGTGTCAAGAAGCCCCATCGCTATCGGCCTGGT CCACCGGCGGTGTCAAGAAGCCCCCTCGCTATCGGCCTGGT < 41bp 0.779975085256397 0.388131813139764 0.21633011 0.12887931 prediction 0.559950170512794 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27777966 chr6:27777970 nonsynonymous SNV 0.222 0 25 hm5C_associated_SNPs_57914 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr1 154965221 154965221 1 + G T SARC 154965219 + 154965199 154965239 41 ACAGAGACATCTGGGATTTTCTGCGTCAGCTGTTTGTCCCA ACAGAGACATCTGGGATTTTCTTCGTCAGCTGTTTGTCCCA < 41bp 0.779960527876436 0.457837010545835 0.33397382 0.18011478 prediction 0.559921055752871 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154965219 chr1:154965221 synonymous SNV . 0 23 hm5C_associated_SNPs_57915 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:154965194-154965221
64251 chr20 43629144 43629144 1 + G T UCEC 43629141 + 43629121 43629161 41 CCCAGCAGCGGGAAGTGGACCAGGACGATGAAGAAAACTCA CCCAGCAGCGGGAAGTGGACCAGTACGATGAAGAAAACTCA < 41bp 0.77995349223841 0.403323441159835 0.722353 0.28550425 prediction 0.559906984476819 Functional Loss - STK4 ENSG00000101109 CDS Human protein_coding chr20:43629141 chr20:43629144 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_57918 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:43629112-43629147
64251 chr20 4680140 4680140 1 + G T UCEC 4680137 + 4680117 4680157 41 CTCATGGTGGTGGCTGGGGTCAAGGAGGTGGCACCCACAGT CTCATGGTGGTGGCTGGGGTCAATGAGGTGGCACCCACAGT < 41bp 0.900083875150349 0.620132240474691 0.8740826 0.78087366 prediction 0.559903269351316 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680137 chr20:4680140 stopgain 0.997 0 24 hm5C_associated_SNPs_57919 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:4680111-4680140
64251 chr16 1819648 1819648 1 + G T rs193095181 1819645 + 1819625 1819665 41 GGTGGGATTTCTCAGGCTGCCAGGGCAGGCCCAGGCCTCAG GGTGGGATTTCTCAGGCTGCCAGTGCAGGCCCAGGCCTCAG < 41bp 0.871556130548141 0.591619091647263 0.88035405 0.30608472 prediction 0.559874077801755 Functional Loss - MAPK8IP3 ENSG00000138834 UTR3 Human protein_coding chr16:1819645 chr16:1819648 . . 0 24 hm5C_associated_SNPs_57924 0 0 5 BUD13 POSTAR2 ENCODE chr16:1819638-1819668
64251 chr6 26388296 26388296 1 + G T SARC 26388293 + 26388273 26388313 41 GCCCAAGAGGATGGGAGCATCTGGCTGGAGTGCATATCTGG GCCCAAGAGGATGGGAGCATCTGTCTGGAGTGCATATCTGG < 41bp 0.779924618709979 0.400690165691139 0.3702658 0.10693058 prediction 0.559849237419957 Functional Loss - BTN2A2 ENSG00000124508 CDS Human protein_coding chr6:26388293 chr6:26388296 nonsynonymous SNV 0.081 1 24 hm5C_associated_SNPs_57925 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:26388277-26388302
64251 chr1 244724310 244724310 1 + G T LIHC 244724307 + 244724287 244724327 41 TTTTACATTTTCAGCACTGCCAGGATTACTGCTATGGAACA TTTTACATTTTCAGCACTGCCAGTATTACTGCTATGGAACA < 41bp 0.779901758868795 0.423565845735864 0.7100961 0.16367379 prediction 0.559803517737589 Functional Loss - CATSPERE ENSG00000179397 CDS Human protein_coding chr1:244724307 chr1:244724310 nonsynonymous SNV 0.010 0 24 hm5C_associated_SNPs_57926 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:244724300-244724320
64251 chr20 42265860 42265860 1 + G T LUAD 42265858 + 42265838 42265878 41 TTTAGATGAAACGTTCTCCTCTGAGAAGGCACGGCTGGCTC TTTAGATGAAACGTTCTCCTCTTAGAAGGCACGGCTGGCTC < 41bp 0.779901508146401 0.449964069767734 0.13200572 0.045235068 prediction 0.559803016292803 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42265858 chr20:42265860 stopgain 0.991 1 23 hm5C_associated_SNPs_57927 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:42265849-42265878
64251 chr19 17337943 17337943 1 + G T COAD 17337940 + 17337920 17337960 41 TCCCAGGCCCTCCTGGGCGCCAAGAAGCCTATTGGAGCCAT TCCCAGGCCCTCCTGGGCGCCAATAAGCCTATTGGAGCCAT < 41bp 0.779900134353104 0.398310433753386 0.22258657 0.14912885 prediction 0.559800268706208 Functional Loss - OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337940 chr19:17337943 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_57928 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17337916-17337943
64251 chr3 52512504 52512504 1 + G T LUSC 52512501 + 52512481 52512521 41 GCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTCTCTGCTG GCATAGGCAGCCTCCCGTGTCTGTAGCACGTGTCTCTGCTG < 41bp 0.902476599242359 0.622605011442611 0.5310368 0.15298742 prediction 0.559743175599496 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52512501 chr3:52512504 stopgain 0.993 1 24 hm5C_associated_SNPs_57934 0 0 4 DDX24 POSTAR2 ENCODE chr3:52512453-52512504
64251 chr2 10184405 10184405 1 + G T rs530879569 10184403 + 10184383 10184423 41 AACGACGGGAGGCGGGAGCGCCGCACTGCCTTGGAGGCGGG AACGACGGGAGGCGGGAGCGCCTCACTGCCTTGGAGGCGGG < 41bp 0.77986580114651 0.462027590831409 0.53862834 0.38241404 prediction 0.559731602293019 Functional Loss - KLF11 ENSG00000172059 UTR5 Human protein_coding chr2:10184403 chr2:10184405 . . 0 23 hm5C_associated_SNPs_57935 0 0 7 AKAP8L POSTAR2 ENCODE chr2:10184359-10184438
64251 chr13 38933458 38933458 1 + G T LIHC 38933456 + 38933436 38933476 41 AGATGGAATAGGAATAAATCCTGCACAGACTGCTGGTGAGT AGATGGAATAGGAATAAATCCTTCACAGACTGCTGGTGAGT < 41bp 0.806732978543428 0.526965726527231 0.12472612 0.05356422 prediction 0.559534504032394 Functional Loss - UFM1 ENSG00000120686 CDS Human protein_coding chr13:38933456 chr13:38933458 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_57946 0 0 14 WDR33 POSTAR2 GSE61123,GSM1496985 chr13:38933437-38933472
64251 chrX 207360 207360 1 + G T PAAD 207357 + 207337 207377 41 TGGATGCCGGGGTGCGGTACCTGGACCTGCGGATAGCCCAC TGGATGCCGGGGTGCGGTACCTGTACCTGCGGATAGCCCAC < 41bp 0.899331374663569 0.619577859195749 0.8915415 0.70954895 prediction 0.55950703093564 Functional Loss - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:207357 chrX:207360 nonsynonymous SNV 0.627 3 24 hm5C_associated_SNPs_57950 0 0 5 BUD13 POSTAR2 ENCODE chrX:207314-207393
64251 chr6 43267197 43267197 1 + G T LUAD 43267194 + 43267174 43267214 41 CTTTCTTCTTCGCCGGTGTGCTGGTGGGGGCTGTGGCCTTT CTTTCTTCTTCGCCGGTGTGCTGTTGGGGGCTGTGGCCTTT < 41bp 0.779742654940578 0.377524587693559 0.37914518 0.11728668 prediction 0.559485309881155 Functional Loss - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43267194 chr6:43267197 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_57952 0 0 3 GRWD1 POSTAR2 ENCODE chr6:43267179-43267251
64251 chr1 70877126 70877126 1 + G T SARC 70877123 + 70877103 70877143 41 AGGAAAAAGACGCCTCCTCACAAGGTTTCCTGCCACACTTC AGGAAAAAGACGCCTCCTCACAATGTTTCCTGCCACACTTC < 41bp 0.898913727394702 0.619235425088379 0.8977058 0.18766415 prediction 0.559356604612646 Functional Loss - CTH ENSG00000116761 CDS Human protein_coding chr1:70877123 chr1:70877126 nonsynonymous SNV 0.009 4 24 hm5C_associated_SNPs_57963 0 0 3 GRWD1 POSTAR2 ENCODE chr1:70877095-70877270
64251 chr14 24843536 24843536 1 + G T PAAD 24843534 + 24843514 24843554 41 CCTTGCACTGCTCTGCAGCCCAGCGCTCAGCCCAGGAGCTG CCTTGCACTGCTCTGCAGCCCATCGCTCAGCCCAGGAGCTG < 41bp 0.779659925131592 0.492034177127585 0.13532594 0.051850557 prediction 0.559319850263184 Functional Loss - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24843534 chr14:24843536 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57964 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr14:24843502-24843538
64251 chr19 14034203 14034203 1 + G T LUAD 14034201 + 14034181 14034221 41 CCTGGTCCAGCGGCCTGGCCCGGGTCTGTCTCAGGAGGCCG CCTGGTCCAGCGGCCTGGCCCGTGTCTGTCTCAGGAGGCCG < 41bp 0.779656729198388 0.433247995932461 0.6918627 0.111297995 prediction 0.559313458396776 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14034201 chr19:14034203 nonsynonymous SNV 0.952 1 23 hm5C_associated_SNPs_57965 0 0 2 AKAP8L POSTAR2 ENCODE chr19:14034145-14034215
64251 chr16 4558045 4558045 1 + G T SARC 4558043 + 4558023 4558063 41 CAGCGAGCACTGAAACTCCCCAGCACAGGGGAAGGGACCCA CAGCGAGCACTGAAACTCCCCATCACAGGGGAAGGGACCCA < 41bp 0.857026069877352 0.577385782308908 0.103585005 0.0782662 prediction 0.559280575136887 Functional Loss - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4558043 chr16:4558045 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_57967 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:4558040-4558100
64251 chr7 106810286 106810286 1 + G C rs147847983 106810285 + 106810265 106810305 41 GAGGGGAACGCGATGAATGGCGAAAGAGGGTGGGGGATGGA GAGGGGAACGCGATGAATGGCCAAAGAGGGTGGGGGATGGA < 41bp 0.779639693175653 0.486691555118691 0.7188442 0.40329692 prediction 0.559279386351305 Functional Loss - HBP1 ENSG00000105856 UTR5 Human protein_coding chr7:106810285 chr7:106810286 . . 0 22 hm5C_associated_SNPs_57968 0 0 10 CSTF2T POSTAR2 ENCODE chr7:106810242-106810288
64251 chr5 157182070 157182070 1 + G T LUSC 157182068 + 157182048 157182088 41 GCCTCTGCAAGGGAGGAGTCCAGGTCAGAGCTGTCAGGGAG GCCTCTGCAAGGGAGGAGTCCATGTCAGAGCTGTCAGGGAG < 41bp 0.779629989272556 0.441414176346887 0.5606257 0.18841797 prediction 0.559259978545112 Functional Loss - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157182068 chr5:157182070 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_57971 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:157182065-157182080
64251 chr1 228335335 228335335 1 + G C LUSC 228335331 + 228335311 228335351 41 TTTAGGAGCAGCGGCTGCGGCAGCGCAACACTGAAACCGAG TTTAGGAGCAGCGGCTGCGGCAGCCCAACACTGAAACCGAG < 41bp 0.794317777592571 0.514689280566284 0.86869484 0.7165432 prediction 0.559256994052573 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335331 chr1:228335335 nonsynonymous SNV 0.946 4 25 hm5C_associated_SNPs_57972 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228335318-228335388
64251 chr18 72998506 72998506 1 + G C LUAD 72998502 + 72998482 72998522 41 GTGGCCCTGAGTGAGTCAGCCAAGGATCAGAAAGCAGCGAA GTGGCCCTGAGTGAGTCAGCCAAGCATCAGAAAGCAGCGAA < 41bp 0.782683844441519 0.503101451355964 0.3412517 0.11636227 prediction 0.559164786171109 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998502 chr18:72998506 nonsynonymous SNV 0.966 2 25 hm5C_associated_SNPs_57979 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr18:72998491-72998527
64251 chr19 9949166 9949166 1 + G T SARC 9949164 + 9949144 9949184 41 GCCAGCCAGTGGGAGCGGCCCAGCGGCAACAGCAGCAGTGG GCCAGCCAGTGGGAGCGGCCCATCGGCAACAGCAGCAGTGG < 41bp 0.865929458489974 0.586353085157574 0.5667837 0.20827246 prediction 0.559152746664798 Functional Loss - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9949164 chr19:9949166 nonsynonymous SNV 0.684 0 23 hm5C_associated_SNPs_57980 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:9949119-9949214
64251 chr4 6925673 6925673 1 + C T SKCM 6925671 + 6925651 6925691 41 GACCTTGTGGTCACGAGCAGCTCCAGTGCCATTGTGACCCT GACCTTGTGGTCACGAGCAGCTTCAGTGCCATTGTGACCCT < 41bp 0.801404297580947 0.521829839544599 0.46113753 0.11367881 prediction 0.559148916072697 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925671 chr4:6925673 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_57981 0 0 2 GRWD1 POSTAR2 ENCODE chr4:6925505-6925689
64251 chr10 124186524 124186524 1 + G T UCEC 124186521 + 124186501 124186541 41 CTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCG CTGGCGCCATTGTAGCACAGCGGTGTCCCGGCAGATCTGCG < 41bp 0.779568872661683 0.394298803118948 0.86179197 0.3276356 prediction 0.559137745323366 Functional Loss - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124186521 chr10:124186524 nonsynonymous SNV 0.900 3 24 hm5C_associated_SNPs_57984 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:124186510-124186546
64251 chr1 161719735 161719735 1 + G T rs149171825 161719733 + 161719713 161719753 41 CCGTCGCGGAGCCAGATCACCTGAGGGAAGCGGGCATCACG CCGTCGCGGAGCCAGATCACCTTAGGGAAGCGGGCATCACG < 41bp 0.870724109534462 0.591172763064416 0.8911499 0.39572254 prediction 0.559102692940093 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719733 chr1:161719735 synonymous SNV . 0 23 hm5C_associated_SNPs_57988 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161719715-161719737
64251 chr19 11464486 11464486 1 + G T HNSC 11464484 + 11464464 11464504 41 GCAGGTCTGCTGTGCACGTGCTGCAGAACTCCATAGACAGC GCAGGTCTGCTGTGCACGTGCTTCAGAACTCCATAGACAGC < 41bp 0.779549545653301 0.458713974142777 0.033307552 0.020711511 prediction 0.559099091306602 Functional Loss - CCDC159 ENSG00000183401 CDS Human protein_coding chr19:11464484 chr19:11464486 synonymous SNV . 0 23 hm5C_associated_SNPs_57989 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr19:11464419-11464495
64251 chr19 11464488 11464488 1 + A T HNSC 11464484 + 11464464 11464504 41 GCAGGTCTGCTGTGCACGTGCTGCAGAACTCCATAGACAGC GCAGGTCTGCTGTGCACGTGCTGCTGAACTCCATAGACAGC < 41bp 0.779549545653301 0.457597432261759 0.033307552 0.02494958 prediction 0.559099091306602 Functional Loss - CCDC159 ENSG00000183401 CDS Human protein_coding chr19:11464484 chr19:11464488 nonsynonymous SNV 0.920 3 25 hm5C_associated_SNPs_57990 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr19:11464419-11464495
64251 chr19 42791752 42791752 1 + G C LGG 42791751 + 42791731 42791771 41 CCTTCATGATCTTCAGCAAGCGGCACCGGGCCCTGGTCCAC CCTTCATGATCTTCAGCAAGCCGCACCGGGCCCTGGTCCAC < 41bp 0.779543960156611 0.477589716004628 0.32624632 0.05274543 prediction 0.559087920313221 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791751 chr19:42791752 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_57993 0 0 2 PPIG POSTAR2 ENCODE chr19:42791750-42791776
64251 chr19 17597654 17597654 1 + G T GBM 17597651 + 17597631 17597671 41 GGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGC GGGCTGTGGCTGGGCCTGGCCAATGCGGGCATGGAGGCCGC < 41bp 0.895862135986901 0.616337370263583 0.66988087 0.3840161 prediction 0.559049531446637 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17597651 chr19:17597654 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_57995 0 0 2 CSTF2T POSTAR2 ENCODE chr19:17597606-17597674
64251 chr1 150315901 150315901 1 + G T COAD 150315898 + 150315878 150315918 41 AACTACAAGAAAAAGTCAGGCTGGGCCTGATGCCTCCTCCA AACTACAAGAAAAAGTCAGGCTGTGCCTGATGCCTCCTCCA < 41bp 0.779523987152817 0.396911864384273 0.1765998 0.054902375 prediction 0.559047974305635 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150315898 chr1:150315901 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_57997 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150315883-150315924
64251 chr16 8870281 8870281 1 + G T LUAD 8870279 + 8870259 8870299 41 AGGTCATCAACATCATCAAGCGGGAGGACCTGCTAAATAAT AGGTCATCAACATCATCAAGCGTGAGGACCTGCTAAATAAT < 41bp 0.779509804720189 0.440034968424485 0.5655169 0.16253683 prediction 0.559019609440378 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8870279 chr16:8870281 synonymous SNV . 0 23 hm5C_associated_SNPs_58002 0 0 3 PPIG POSTAR2 ENCODE chr16:8870198-8870304
64251 chr17 48761112 48761112 1 + G C PRAD 48761111 + 48761091 48761131 41 AGTCTGCATGTGCACGGTGGCGAGAAGGTACGCGTGGGGTA AGTCTGCATGTGCACGGTGGCCAGAAGGTACGCGTGGGGTA < 41bp 0.80863309182434 0.529136959287134 0.891783 0.54714984 prediction 0.558992265074412 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48761111 chr17:48761112 nonsynonymous SNV 0.718 5 22 hm5C_associated_SNPs_58004 0 0 4 LSM11 POSTAR2 ENCODE chr17:48761048-48761118
64251 chr3 49570555 49570555 1 + G T UCEC 49570553 + 49570533 49570573 41 CCAGCCCCCACCGCCCTTCACAGCACCCATGGAGGGCAAGG CCAGCCCCCACCGCCCTTCACATCACCCATGGAGGGCAAGG < 41bp 0.77947473329971 0.47519858402801 0.14931929 0.034741044 prediction 0.558949466599419 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49570553 chr3:49570555 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_58007 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49570460-49570560
64251 chr12 57861148 57861148 1 + C T UCEC 57861146 + 57861126 57861166 41 GCCGGAAGTCATACTCACGCCTCGAAAACCTGAAGACGCAC GCCGGAAGTCATACTCACGCCTTGAAAACCTGAAGACGCAC < 41bp 0.779453640778767 0.495866440606562 0.9341893 0.24067655 prediction 0.558907281557534 Functional Loss - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57861146 chr12:57861148 synonymous SNV . 0 23 hm5C_associated_SNPs_58013 0 0 9 METTL14 POSTAR2 GSE46705,GSM1135008 chr12:57861100-57861160
64251 chr8 73959367 73959367 1 + G T rs117100340 73959365 + 73959345 73959385 41 CCCCAAACCTCAACATCACACAGTATACTCAGCTAACAAAC CCCCAAACCTCAACATCACACATTATACTCAGCTAACAAAC < 41bp 0.785503690919938 0.506052650356414 0.025721222 0.019946158 prediction 0.558902081127047 Functional Loss - TERF1 ENSG00000147601 UTR3 Human protein_coding chr8:73959365 chr8:73959367 . . 0 23 hm5C_associated_SNPs_58014 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr8:73959334-73959367
64251 chr11 66262853 66262853 1 + G T LUAD 66262851 + 66262831 66262871 41 TCCAGATTCAGAGCTGGTATCGGAGCGGGGAGACCTGGGAT TCCAGATTCAGAGCTGGTATCGTAGCGGGGAGACCTGGGAT < 41bp 0.779445609239184 0.432498466800845 0.9564145 0.9338872 prediction 0.558891218478368 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262851 chr11:66262853 synonymous SNV . 0 23 hm5C_associated_SNPs_58016 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:66262835-66262858
64251 chr2 122522729 122522729 1 + G T SARC 122522727 + 122522707 122522747 41 CAGTCGAGGCTGTCTGTCAACAGCGTGACTGCTGGAGACTA CAGTCGAGGCTGTCTGTCAACATCGTGACTGCTGGAGACTA < 41bp 0.85147022191175 0.572032616468854 0.8102621 0.22090587 prediction 0.558875210885791 Functional Loss - TSN ENSG00000211460 CDS Human protein_coding chr2:122522727 chr2:122522729 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_58018 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:122522709-122522733
64251 chr3 129020936 129020936 1 + G T OV 129020933 + 129020913 129020953 41 CTCTTCTGTGGTGAACAACTCGCGAAACAACACTCCTGAGT CTCTTCTGTGGTGAACAACTCGCTAAACAACACTCCTGAGT < 41bp 0.896358830939445 0.61693073515555 0.7087132 0.3769489 prediction 0.55885619156779 Functional Loss - HMCES ENSG00000183624 CDS Human protein_coding chr3:129020933 chr3:129020936 nonsynonymous SNV 0.965 1 24 hm5C_associated_SNPs_58021 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:129020909-129020940
64251 chr6 27100932 27100932 1 + G T HNSC 27100929 + 27100909 27100949 41 CTAGGGCCGGTCTCCAGTTCCCCGTGGGCCGAGTGCACCGC CTAGGGCCGGTCTCCAGTTCCCCTTGGGCCGAGTGCACCGC < 41bp 0.779426475494054 0.404896474313909 0.19245684 0.04561135 prediction 0.558852950988108 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100929 chr6:27100932 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_58022 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27100820-27100940
64251 chr17 79952720 79952720 1 + G T ESCA 79952718 + 79952698 79952738 41 GAGTGCCTGCAGCACCCCGGCGGGGCCACCCCAGTCTGCGT GAGTGCCTGCAGCACCCCGGCGTGGCCACCCCAGTCTGCGT < 41bp 0.877496495277358 0.598076492066033 0.686064 0.35304728 prediction 0.558840006422648 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79952718 chr17:79952720 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_58025 0 0 5 BUD13 POSTAR2 ENCODE chr17:79952685-79952734
64251 chr19 42791299 42791299 1 + G T COAD 42791296 + 42791276 42791316 41 CCCTTTGGGGGTGGTGGAATCTGGTAAGGGTCCGCCTCCCA CCCTTTGGGGGTGGTGGAATCTGTTAAGGGTCCGCCTCCCA < 41bp 0.896459459275213 0.617068197770879 0.7572745 0.14323765 prediction 0.558782523008667 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791296 chr19:42791299 nonsynonymous SNV 0.961 2 24 hm5C_associated_SNPs_58032 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:42791299-42791300
64251 chr6 26020777 26020777 1 + G T OV 26020775 + 26020755 26020795 41 GTGGCAAGGCGCCACGCAAACAGTTGGCCACTAAGGCAGCC GTGGCAAGGCGCCACGCAAACATTTGGCCACTAAGGCAGCC < 41bp 0.779373406197173 0.446926656520169 0.11894789 0.07026568 prediction 0.558746812394346 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020775 chr6:26020777 nonsynonymous SNV 0.030 0 23 hm5C_associated_SNPs_58034 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26020760-26020780
64251 chr19 50381799 50381799 1 + A T UCEC 50381795 + 50381775 50381815 41 CTGGGCTCCTGTAGAGGAGGCTGGAGATTCCACCCAAATCC CTGGGCTCCTGTAGAGGAGGCTGGTGATTCCACCCAAATCC < 41bp 0.827846274663356 0.548491386515222 0.7266741 0.61692786 prediction 0.558709776296268 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50381795 chr19:50381799 synonymous SNV . 0 25 hm5C_associated_SNPs_58036 0 0 3 GRWD1 POSTAR2 ENCODE chr19:50381753-50381802
64251 chr5 68389872 68389872 1 + G T rs143965380 68389869 + 68389849 68389889 41 CGCCGCTGCTTCCCGGGAACCTGGCGCCGCCGGAACTGATC CGCCGCTGCTTCCCGGGAACCTGTCGCCGCCGGAACTGATC < 41bp 0.779351900177978 0.433405573885217 0.8490466 0.36857796 prediction 0.558703800355955 Functional Loss - SLC30A5 ENSG00000145740 UTR5 Human protein_coding chr5:68389869 chr5:68389872 . . 0 24 hm5C_associated_SNPs_58038 0 0 1 DDX3X POSTAR2 ENCODE chr5:68389867-68389968
64251 chr1 193172942 193172942 1 + G T LUSC 193172940 + 193172920 193172960 41 TAAAGGAGGGTGCATCTGCCCGGAAGACTCAGACTCCTGCA TAAAGGAGGGTGCATCTGCCCGTAAGACTCAGACTCCTGCA < 41bp 0.847320988108131 0.567970029201461 0.30265832 0.13972372 prediction 0.55870191781334 Functional Loss - CDC73 ENSG00000134371 CDS Human protein_coding chr1:193172940 chr1:193172942 synonymous SNV . 0 23 hm5C_associated_SNPs_58040 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:193172932-193172949
64251 chr4 3447936 3447936 1 + G C LUAD 3447935 + 3447915 3447955 41 GGCTCGCACCCCTGGCTGGCCGCCATCTACATCGGGGACAG GGCTCGCACCCCTGGCTGGCCCCCATCTACATCGGGGACAG < 41bp 0.814930147084667 0.535587251626635 0.1795533 0.053965926 prediction 0.558685790916066 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3447935 chr4:3447936 nonsynonymous SNV 0.993 5 22 hm5C_associated_SNPs_58041 0 0 1 GRWD1 POSTAR2 ENCODE chr4:3447893-3447942
64251 chr13 113773306 113773306 1 + G C LUSC 113773302 + 113773282 113773322 41 AGCCACGCCCAGGAGTCCTCCTGCGAGCCCCATTTCCCTAG AGCCACGCCCAGGAGTCCTCCTGCCAGCCCCATTTCCCTAG < 41bp 0.779342839539796 0.489336756654874 0.044617623 0.027468413 prediction 0.558685679079591 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113773302 chr13:113773306 nonsynonymous SNV 0.002 2 25 hm5C_associated_SNPs_58042 0 0 2 DDX55 POSTAR2 ENCODE chr13:113773299-113773370
64251 chr5 44809472 44809472 1 + G C LUAD 44809471 + 44809451 44809491 41 CGAACCCGAACCTGAACCTGCGCTGGACCTCGCGGCGCTGC CGAACCCGAACCTGAACCTGCCCTGGACCTCGCGGCGCTGC < 41bp 0.808604090410978 0.529279029116278 0.29205716 0.15994567 prediction 0.558650122589401 Functional Loss - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809471 chr5:44809472 synonymous SNV 0.003 0 22 hm5C_associated_SNPs_58044 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:44809452-44809484
64251 chr1 9779996 9779996 1 + G T COAD 9779993 + 9779973 9780013 41 CTGCAGGACTGCCCCATTGCCTGGGCCAACCTCATGCTGTT CTGCAGGACTGCCCCATTGCCTGTGCCAACCTCATGCTGTT < 41bp 0.779316485396332 0.38253312234757 0.9039117 0.32627368 prediction 0.558632970792663 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9779993 chr1:9779996 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58046 0 0 3 DDX24 POSTAR2 ENCODE chr1:9779978-9780075
64251 chr6 26459752 26459752 1 + G T UCEC 26459749 + 26459729 26459769 41 CCCACTGATCCCATCTTGGCCACGGTTGGAGAAAACACTAC CCCACTGATCCCATCTTGGCCACTGTTGGAGAAAACACTAC < 41bp 0.779312766437511 0.386710454412202 0.28785747 0.17406458 prediction 0.558625532875022 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459749 chr6:26459752 synonymous SNV . 0 24 hm5C_associated_SNPs_58047 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:26459734-26459758
64251 chr3 127358250 127358250 1 + G T UCS 127358247 + 127358227 127358267 41 GGGAGCTGGGCTGGGAGCCCCTGGCTCAGGCTTCCCCAGCG GGGAGCTGGGCTGGGAGCCCCTGTCTCAGGCTTCCCCAGCG < 41bp 0.779266831028896 0.388992351097542 0.67880934 0.07089332 prediction 0.558533662057793 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127358247 chr3:127358250 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_58057 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:127358243-127358265
64251 chr6 13977461 13977461 1 + G T LUAD 13977459 + 13977439 13977479 41 AACAGAGGAAACCCAAAGTGCTGGAGTGTTGTCATAGGGTT AACAGAGGAAACCCAAAGTGCTTGAGTGTTGTCATAGGGTT < 41bp 0.827371900428582 0.548105540954333 0.15741473 0.043363005 prediction 0.558532718948497 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977459 chr6:13977461 synonymous SNV . 0 23 hm5C_associated_SNPs_58058 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:13977459-13977482
64251 chr19 56206162 56206162 1 + G T LUAD 56206159 + 56206139 56206179 41 GCGTTTGACATGAGTGGGGTCAGGGGATCTCTGGCTGAGGC GCGTTTGACATGAGTGGGGTCAGTGGATCTCTGGCTGAGGC < 41bp 0.898548170751254 0.61928221545646 0.91047424 0.5544713 prediction 0.558531910589587 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56206159 chr19:56206162 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_58059 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:56206150-56206177
64251 chr5 145838723 145838723 1 + G T LUAD 145838720 + 145838700 145838740 41 CTCAGGCACAAGCTCAGGCCCAGGCCCAGGCTCAGGTCCAG CTCAGGCACAAGCTCAGGCCCAGTCCCAGGCTCAGGTCCAG < 41bp 0.77925961608362 0.389405732280661 0.34018803 0.052481472 prediction 0.55851923216724 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838720 chr5:145838723 nonsynonymous SNV 0.027 0 24 hm5C_associated_SNPs_58060 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr19 10793812 10793812 1 + G T SARC 10793810 + 10793790 10793830 41 TTTTCCCTGAGAACGTAAAACAGCAGGGGCCGATCCTGACA TTTTCCCTGAGAACGTAAAACATCAGGGGCCGATCCTGACA < 41bp 0.77924224775308 0.455063749484965 0.23997548 0.15814248 prediction 0.558484495506161 Functional Loss - ILF3;ILF3 ENSG00000129351;ENSG00000129351 exonic;splicing Human other chr19:10793810 chr19:10793812 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58061 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:10793800-10793820
64251 chr8 66605984 66605984 1 + G T UCEC 66605982 + 66605962 66606002 41 CAAAGAAGAAGGAGAGTGTTCAGCAAGACTAAGGTTAGTTT CAAAGAAGAAGGAGAGTGTTCATCAAGACTAAGGTTAGTTT < 41bp 0.850506014479305 0.571301073705216 0.30417854 0.19554135 prediction 0.558409881548179 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66605982 chr8:66605984 nonsynonymous SNV 0.428 0 23 hm5C_associated_SNPs_58063 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:66605973-66605994
64251 chr4 88977281 88977281 1 + C T UCEC 88977279 + 88977259 88977299 41 AACAGGACCATGAGCCAGCTCTCGACAACCATGTCTCGATG AACAGGACCATGAGCCAGCTCTTGACAACCATGTCTCGATG < 41bp 0.779197685083091 0.487427529846264 0.13545239 0.017291844 prediction 0.558395370166182 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88977279 chr4:88977281 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_58067 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:88977252-88977288
64251 chr1 240256588 240256588 1 + G T COAD 240256585 + 240256565 240256605 41 GCGCAAGGACCTGACGCCCCCGCGGCCGCTTCCCTGCCCGG GCGCAAGGACCTGACGCCCCCGCTGCCGCTTCCCTGCCCGG < 41bp 0.779191050019923 0.412215910907709 0.8860901 0.1682418 prediction 0.558382100039845 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240256585 chr1:240256588 synonymous SNV . 0 24 hm5C_associated_SNPs_58068 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:240256588-240256589
64251 chr1 149858839 149858839 1 + G T HNSC 149858837 + 149858817 149858857 41 TGGGCAAAGTCACCATCGCCCAGGGCGGCGTTTTGCCTAAC TGGGCAAAGTCACCATCGCCCATGGCGGCGTTTTGCCTAAC < 41bp 0.82384909167523 0.544667380555804 0.9233642 0.6990421 prediction 0.558363422238853 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858837 chr1:149858839 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58069 0 0 21 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:149858800-149858840
64251 chr9 138011774 138011774 1 + G T LUAD 138011772 + 138011752 138011792 41 AGCTACCCCAAGCGCAGCGCCGGGGAGGCCTTCATCATCTG AGCTACCCCAAGCGCAGCGCCGTGGAGGCCTTCATCATCTG < 41bp 0.862318766380501 0.583142313810334 0.70473534 0.14964795 prediction 0.558352905140335 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011772 chr9:138011774 nonsynonymous SNV 0.966 5 23 hm5C_associated_SNPs_58070 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:138011730-138011791
64251 chr8 128752825 128752825 1 + C T CESC 128752823 + 128752803 128752843 41 CACAACTACGCAGCGCCTCCCTCCACTCGGAAGGACTATCC CACAACTACGCAGCGCCTCCCTTCACTCGGAAGGACTATCC < 41bp 0.779174419285076 0.499058911682945 0.9316202 0.05241874 prediction 0.558348838570152 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128752823 chr8:128752825 nonsynonymous SNV 0.948 4 23 hm5C_associated_SNPs_58071 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:128752820-128752840
64251 chr19 45562609 45562609 1 + G C LUAD 45562605 + 45562585 45562625 41 GCCACGACTTATGGCATGGCCGACGGTGACTTCGTCAGGTG GCCACGACTTATGGCATGGCCGACCGTGACTTCGTCAGGTG < 41bp 0.785184458499219 0.506036489817288 0.22593904 0.13410652 prediction 0.558295937363861 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45562605 chr19:45562609 nonsynonymous SNV 0.210 3 25 hm5C_associated_SNPs_58074 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45562590-45562618
64251 chr22 39917519 39917519 1 + G C HNSC 39917518 + 39917498 39917538 41 GATGTCCCCCTTCGACCAGTCGGGTTTGGGGGCTGAAGAAA GATGTCCCCCTTCGACCAGTCCGGTTTGGGGGCTGAAGAAA < 41bp 0.817518394121954 0.538374261656409 0.60356545 0.12312698 prediction 0.558288264931089 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917518 chr22:39917519 synonymous SNV . 0 22 hm5C_associated_SNPs_58076 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr22:39917504-39917525
64251 chr12 21680708 21680708 1 + G C UCEC 21680707 + 21680687 21680727 41 AGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCCGGGTGA AGCCGGAGAAAGGACCTCTCCCACCGGCCACTGCCGGGTGA < 41bp 0.779140807703576 0.473143670308652 0.23608947 0.13043109 prediction 0.558281615407151 Functional Loss - SPX ENSG00000134548 CDS Human protein_coding chr12:21680707 chr12:21680708 nonsynonymous SNV 0.110 3 22 hm5C_associated_SNPs_58078 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr12:21680706-21680726
64251 chr20 61598336 61598336 1 + G T rs561793602 61598334 + 61598314 61598354 41 ATGTTCCCATCCTGGTAGCCCAGGGTCCCCGGGACACCTCC ATGTTCCCATCCTGGTAGCCCATGGTCCCCGGGACACCTCC < 41bp 0.862084310089852 0.5829710270964 0.8327801 0.29501355 prediction 0.558226565986905 Functional Loss - SLC17A9 ENSG00000101194 intronic Human protein_coding chr20:61598334 chr20:61598336 . . 0 23 hm5C_associated_SNPs_58084 0 0 2 HNRNPK POSTAR2 ENCODE chr20:61598324-61598371
64251 chr12 50867291 50867291 1 + C T CESC 50867289 + 50867269 50867309 41 ACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTA ACTCAATATGAGTACCAGTTCTTCATGTGCTGCTGAGCTTA < 41bp 0.783370166228521 0.504260900924033 0.9474614 0.55658054 prediction 0.558218530608975 Functional Loss - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50867289 chr12:50867291 nonsynonymous SNV 0.015 0 23 hm5C_associated_SNPs_58086 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:50867273-50867306
64251 chr1 226016481 226016481 1 + G T LUSC 226016478 + 226016458 226016498 41 GTGCTGGGCTTTGCCATCTACTGGTTCATCTCCCGGGACAA GTGCTGGGCTTTGCCATCTACTGTTTCATCTCCCGGGACAA < 41bp 0.779100071972323 0.38557070946203 0.31576174 0.12007713 prediction 0.558200143944646 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016478 chr1:226016481 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_58087 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:226016461-226016499
64251 chr1 162567644 162567644 1 + G T LGG 162567641 + 162567621 162567661 41 CTCTCCTCTTATCTCCTATGCTGGAGAAGTAAGTCTGCTTT CTCTCCTCTTATCTCCTATGCTGTAGAAGTAAGTCTGCTTT < 41bp 0.779094585396953 0.412410630629938 0.6247034 0.22443733 prediction 0.558189170793906 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162567641 chr1:162567644 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_58089 0 0 2 PPIG POSTAR2 ENCODE chr1:162567591-162567647
64251 chr17 18111704 18111704 1 + G T UCEC 18111702 + 18111682 18111722 41 CCCGAAAGGTGAAGATGCGGCGGCACTGAGTCTACCCGCCG CCCGAAAGGTGAAGATGCGGCGTCACTGAGTCTACCCGCCG < 41bp 0.847873919227386 0.568788431183591 0.32468468 0.14559379 prediction 0.55817097608759 Functional Loss - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18111702 chr17:18111704 synonymous SNV . 0 23 hm5C_associated_SNPs_58091 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:18111681-18111709
64251 chr5 137708510 137708510 1 + A T LUAD 137708506 + 137708486 137708526 41 CTTCTCCAGGGCATTCGAGTCTCCATTGCACAATGGCCAGC CTTCTCCAGGGCATTCGAGTCTCCTTTGCACAATGGCCAGC < 41bp 0.779063487098036 0.428133264744044 0.9664202 0.2389484 prediction 0.558126974196071 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137708506 chr5:137708510 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_58096 0 0 4 DDX3X POSTAR2 ENCODE chr5:137708458-137708515
64251 chr2 48687006 48687006 1 + G T UCEC 48687004 + 48686984 48687024 41 CTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCATT CTGTGGTTGACGGTCTCACCCGTAAGTACATGGAAACCATT < 41bp 0.858261290671369 0.579198939447908 0.88619924 0.12552562 prediction 0.558124702446922 Functional Loss - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48687004 chr2:48687006 synonymous SNV . 0 23 hm5C_associated_SNPs_58097 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr2:48687000-48687020
64251 chr2 190708728 190708728 1 + G T LIHC 190708725 + 190708705 190708745 41 AAAAGCAGAGTATCAGATCACAAGATGGCTCTCATGTCAGT AAAAGCAGAGTATCAGATCACAATATGGCTCTCATGTCAGT < 41bp 0.779035127570112 0.43993267603422 0.5330144 0.20272002 prediction 0.558070255140225 Functional Loss - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190708725 chr2:190708728 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_58103 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:190708720-190708740
64251 chr11 60703596 60703596 1 + G T SARC 60703593 + 60703573 60703613 41 CCTCTGGCCTCTGGCACCGCCTGGCTGGGGCTGCCCCCTGC CCTCTGGCCTCTGGCACCGCCTGTCTGGGGCTGCCCCCTGC < 41bp 0.779034557951007 0.410485320561306 0.21692902 0.11450088 prediction 0.558069115902014 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703593 chr11:60703596 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_58104 0 0 1 RPS3 POSTAR2 ENCODE chr11:60703542-60703619
64251 chr8 8875864 8875864 1 + A T PAAD 8875860 + 8875840 8875880 41 GTACTAAAAAAAGTAATTGACTGGATGAAATTGAAGGAATT GTACTAAAAAAAGTAATTGACTGGTTGAAATTGAAGGAATT < 41bp 0.779026324648669 0.466771366597759 0.4230969 0.38220236 prediction 0.558052649297337 Functional Loss - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8875860 chr8:8875864 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_58105 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:8875837-8875868
64251 chr15 40751449 40751449 1 + G T UCEC 40751447 + 40751427 40751467 41 AGAACTATCCCAAGGCTTGGCAGGGGGCCAGCTCTGGGGAG AGAACTATCCCAAGGCTTGGCATGGGGCCAGCTCTGGGGAG < 41bp 0.778992028043335 0.448821312065091 0.9338307 0.89381135 prediction 0.55798405608667 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751447 chr15:40751449 nonsynonymous SNV 0.726 2 23 hm5C_associated_SNPs_58111 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:40751441-40751486
64251 chr3 11070485 11070485 1 + G T LUSC 11070482 + 11070462 11070502 41 CAGCTGCCTATCTCCCCACTCTGGGCCATCCTCTTCTTCTC CAGCTGCCTATCTCCCCACTCTGTGCCATCCTCTTCTTCTC < 41bp 0.778979293847988 0.378488084993527 0.8943141 0.36954412 prediction 0.557958587695975 Functional Loss - SLC6A1 ENSG00000157103 CDS Human protein_coding chr3:11070482 chr3:11070485 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_58114 0 0 1 FUS POSTAR2 GSE43308,GSM1060383 chr3:11070480-11070500
64251 chr2 113346512 113346512 1 + A C rs1047652 113346508 + 113346488 113346528 41 AACTGGACATGAATGACTGCCCCCACGCCCCTCCCCTGCAG AACTGGACATGAATGACTGCCCCCCCGCCCCTCCCCTGCAG < 41bp 0.778965230770798 0.433076162587371 0.08305931 0.032292217 prediction 0.557930461541596 Functional Loss - CHCHD5 ENSG00000125611 UTR3 Human protein_coding chr2:113346508 chr2:113346512 . . 0 25 hm5C_associated_SNPs_58116 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:113346501-113346522
64251 chr16 2577951 2577951 1 + G T LUSC 2577949 + 2577929 2577969 41 GGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGG GGCCGTAGCCACGAAGTGATCCTGGCGCTGACGGCCCGTGG < 41bp 0.876188839807079 0.597227911934802 0.9384947 0.90051156 prediction 0.557921855744555 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577949 chr16:2577951 nonsynonymous SNV 0.266 0 23 hm5C_associated_SNPs_58117 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:2577925-2577955
64251 chr4 48835468 48835468 1 + G T UCEC 48835466 + 48835446 48835486 41 GGAAGAAAGGAGAGTCTTCGCAGAATGCAATGATGAAAGCT GGAAGAAAGGAGAGTCTTCGCATAATGCAATGATGAAAGCT < 41bp 0.840020522422998 0.561134241380421 0.2727723 0.32984513 prediction 0.557772562085153 Functional Loss - OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48835466 chr4:48835468 stopgain 0.977 1 23 hm5C_associated_SNPs_58127 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:48835420-48835477
64251 chr19 10398371 10398371 1 + G T SARC 10398369 + 10398349 10398389 41 GAAAGCCTGGAGCGCTTCACCGGCCTGGATCTGGCCAACGT GAAAGCCTGGAGCGCTTCACCGTCCTGGATCTGGCCAACGT < 41bp 0.842903099207272 0.564019539665117 0.30621055 0.2834432 prediction 0.55776711908431 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398369 chr19:10398371 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_58128 0 0 1 SND1 POSTAR2 ENCODE chr19:10398355-10398393
64251 chr3 183899959 183899959 1 + G T CESC 183899957 + 183899937 183899977 41 AGGTGAGGATCCCAACCCCACTGAACACAAGCGGGGTGCAG AGGTGAGGATCCCAACCCCACTTAACACAAGCGGGGTGCAG < 41bp 0.778879307030566 0.444451060279219 0.4095892 0.10151988 prediction 0.557758614061131 Functional Loss - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899957 chr3:183899959 synonymous SNV . 0 23 hm5C_associated_SNPs_58129 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917666 chr3:183899936-183899959
64251 chr19 50149816 50149816 1 + G T LUAD 50149814 + 50149794 50149834 41 GGCCACGGACAGCTTCCTCGCAGGGCTGGTGAGTGTCCTGG GGCCACGGACAGCTTCCTCGCATGGCTGGTGAGTGTCCTGG < 41bp 0.873865757098104 0.594995122710035 0.91893184 0.4074025 prediction 0.557741268776139 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50149814 chr19:50149816 nonsynonymous SNV 0.572 3 23 hm5C_associated_SNPs_58131 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50149792-50149817
64251 chr19 1080311 1080311 1 + G C rs2074454 1080310 + 1080290 1080330 41 CGTGAGTGATGTGGCGCGGCCGGAGGCTGCCGGGAGCCCCC CGTGAGTGATGTGGCGCGGCCCGAGGCTGCCGGGAGCCCCC < 41bp 0.822792357971805 0.543927564965604 0.88540196 0.45934772 prediction 0.557729586012401 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1080310 chr19:1080311 synonymous SNV . 0 22 hm5C_associated_SNPs_58132 0 0 2 DDX24 POSTAR2 ENCODE chr19:1080278-1080378
64251 chr6 161528980 161528980 1 + G T UCEC 161528977 + 161528957 161528997 41 ACCTGCATCAGCGTCGACACCGGGGAGCTGATGGCCATGAA ACCTGCATCAGCGTCGACACCGGTGAGCTGATGGCCATGAA < 41bp 0.898793125785105 0.619930733688639 0.89669347 0.7471621 prediction 0.557724784192932 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161528977 chr6:161528980 synonymous SNV . 0 24 hm5C_associated_SNPs_58134 0 0 3 BUD13 POSTAR2 ENCODE chr6:161528928-161528980
64251 chr15 90138744 90138744 1 + A T CESC 90138740 + 90138720 90138760 41 AGTTACATCCAGATGGCAGTCCGGATGTGGCTGGGGAGAAA AGTTACATCCAGATGGCAGTCCGGTTGTGGCTGGGGAGAAA < 41bp 0.778850899309279 0.459140712109641 0.44388422 0.21362051 prediction 0.557701798618558 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90138740 chr15:90138744 nonsynonymous SNV 0.021 2 25 hm5C_associated_SNPs_58140 0 0 5 DDX24 POSTAR2 ENCODE chr15:90138644-90138787
64251 chr5 172395551 172395551 1 + G T UCEC 172395549 + 172395529 172395569 41 TCATCTACATCGAGCGGGTGCAGCGTGAGAAGGCCAACGGC TCATCTACATCGAGCGGGTGCATCGTGAGAAGGCCAACGGC < 41bp 0.856326636348994 0.57747708343053 0.32948416 0.08386135 prediction 0.55769910583693 Functional Loss - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172395549 chr5:172395551 nonsynonymous SNV 0.979 0 23 hm5C_associated_SNPs_58141 0 0 2 YBX3 POSTAR2 ENCODE chr5:172395526-172395587
64251 chr5 131822308 131822308 1 - C A UCEC 131822310 - 131822290 131822330 41 TCCACTCTGCCTGATGACCACAGCAGCTACACAGTTCCAGG TCCACTCTGCCTGATGACCACATCAGCTACACAGTTCCAGG < 41bp 0.778835182366552 0.435758116787376 0.276928 0.06377062 prediction 0.557670364733105 Functional Loss - IRF1 ENSG00000125347 CDS Human protein_coding chr5:131822310 chr5:131822308 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58142 0 0 2 DDX24 POSTAR2 ENCODE chr5:131822256-131822316
64251 chr10 45877968 45877968 1 + G C LUAD 45877964 + 45877944 45877984 41 ACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTC ACGTGACTGTGGACGAGGAACTGGCCGAGATCCAGCTGGTC < 41bp 0.798519400648009 0.519684475655573 0.888337 0.2641479 prediction 0.557669849984872 Functional Loss - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45877964 chr10:45877968 nonsynonymous SNV 0.976 4 25 hm5C_associated_SNPs_58143 0 0 1 DDX24 POSTAR2 ENCODE chr10:45877951-45877994
64251 chr12 124156113 124156113 1 + G C LUSC 124156109 + 124156089 124156129 41 GCGGTCAGCGCGTCCCTGGTCGGAGACACCGAGGGTGTGAC GCGGTCAGCGCGTCCCTGGTCGGACACACCGAGGGTGTGAC < 41bp 0.778812066839126 0.493744790282562 0.9035113 0.7332202 prediction 0.557624133678252 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124156109 chr12:124156113 nonsynonymous SNV 0.126 1 25 hm5C_associated_SNPs_58145 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:124156094-124156157
64251 chr19 54969154 54969154 1 + G T LUAD 54969151 + 54969131 54969171 41 GAGTTCACGGTGGAGGTGTACGAGACCCATGCCCGGATCGC GAGTTCACGGTGGAGGTGTACGATACCCATGCCCGGATCGC < 41bp 0.778804327619359 0.386518439094273 0.5261747 0.10301334 prediction 0.557608655238719 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969151 chr19:54969154 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_58147 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54969129-54969156
64251 chr19 54969155 54969155 1 + A T SKCM 54969151 + 54969131 54969171 41 GAGTTCACGGTGGAGGTGTACGAGACCCATGCCCGGATCGC GAGTTCACGGTGGAGGTGTACGAGTCCCATGCCCGGATCGC < 41bp 0.778804327619359 0.476574281023166 0.5261747 0.28107506 prediction 0.557608655238719 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969151 chr19:54969155 nonsynonymous SNV 0.990 2 25 hm5C_associated_SNPs_58148 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54969129-54969156
64251 chrX 150345103 150345103 1 + G T LUSC 150345100 + 150345080 150345120 41 AGAGAGGGAGGCACGCTTTCCTGGAGCTCCTGGTGACAGAA AGAGAGGGAGGCACGCTTTCCTGTAGCTCCTGGTGACAGAA < 41bp 0.882219002446387 0.603424798093613 0.884215 0.27504742 prediction 0.557588408705547 Functional Loss - GPR50-AS1 ENSG00000234696 ncRNA_intronic Human antisense chrX:150345100 chrX:150345103 . . 0 24 hm5C_associated_SNPs_58149 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:150345073-150345124
64251 chr17 40931038 40931038 1 + A T LAML 40931034 + 40931014 40931054 41 TGCAGGCCCTACAGCAGGAGCACAAGGCCGAGATCATCACT TGCAGGCCCTACAGCAGGAGCACATGGCCGAGATCATCACT < 41bp 0.823348208910477 0.544558711073924 0.7060061 0.7169577 prediction 0.557578995673107 Functional Loss - VPS25 ENSG00000131475 CDS Human protein_coding chr17:40931034 chr17:40931038 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_58150 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:40931031-40931055
64251 chr5 140856928 140856928 1 + G T LUAD 140856926 + 140856906 140856946 41 CTTTGAAAACCAGTGCAGACCTGGATCGGGAGACTGTGCCA CTTTGAAAACCAGTGCAGACCTTGATCGGGAGACTGTGCCA < 41bp 0.778786244196061 0.456640046981566 0.074136734 0.010967851 prediction 0.557572488392122 Functional Loss - PCDHGC3 ENSG00000240184 CDS Human protein_coding chr5:140856926 chr5:140856928 synonymous SNV . 0 23 hm5C_associated_SNPs_58151 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:140856923-140856942
64251 chr10 38344263 38344263 1 + A T ESCA 38344259 + 38344239 38344279 41 ATAAGTCAGCCCTCACATTACACCAGAGAACACATACAGGG ATAAGTCAGCCCTCACATTACACCTGAGAACACATACAGGG < 41bp 0.805739321770261 0.526953518276187 0.12241438 0.07223582 prediction 0.557571606988148 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38344259 chr10:38344263 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_58152 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr10:38344260-38344280
64251 chr6 151671726 151671726 1 + G T COAD 151671723 + 151671703 151671743 41 ACGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGGCAG ACGGGATCCTTGCTGGTTCCCAATAACATGATCCAGGGCAG < 41bp 0.778769792136724 0.398952708822816 0.23034266 0.075978965 prediction 0.557539584273447 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151671723 chr6:151671726 stopgain 0.848 0 24 hm5C_associated_SNPs_58157 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151671714-151671751
64251 chr6 80750401 80750401 1 + C T SKCM 80750399 + 80750379 80750419 41 GTTGGTCTGAATTCTCCTAACTCCATTTTGAAAGCTGCTAA GTTGGTCTGAATTCTCCTAACTTCATTTTGAAAGCTGCTAA < 41bp 0.784747725776344 0.505992321048143 0.90876245 0.16109562 prediction 0.557510809456403 Functional Loss - TTK ENSG00000112742 CDS Human protein_coding chr6:80750399 chr6:80750401 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_58159 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:80750360-80750415
64251 chr3 150299521 150299521 1 + G T UCEC 150299518 + 150299498 150299538 41 CCTGAGATAGACAAAAAAATCAAGAACCTAAAGAAGGTGAG CCTGAGATAGACAAAAAAATCAATAACCTAAAGAAGGTGAG < 41bp 0.778754573959487 0.469200737992775 0.8358984 0.8681756 prediction 0.557509147918974 Functional Loss - EIF2A ENSG00000144895 CDS Human protein_coding chr3:150299518 chr3:150299521 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58160 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:150299487-150299530
64251 chr17 73258729 73258729 1 + G T ACC 73258727 + 73258707 73258747 41 TCAGCTCATCAAAGCTGCTCCAGCAGGGAAAACAAGTTCTG TCAGCTCATCAAAGCTGCTCCATCAGGGAAAACAAGTTCTG < 41bp 0.778737799887745 0.474210194975874 0.43848693 0.3336093 prediction 0.557475599775489 Functional Loss - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73258727 chr17:73258729 nonsynonymous SNV 0.583 0 23 hm5C_associated_SNPs_58163 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73258632-73258751
64251 chr16 46960881 46960881 1 + G T LIHC 46960879 + 46960859 46960899 41 TGTTCTACTGCATGAAGCTCCTGGAGGAGACTGGCATCTGT TGTTCTACTGCATGAAGCTCCTTGAGGAGACTGGCATCTGT < 41bp 0.85623294143328 0.577506560024884 0.4225504 0.30126137 prediction 0.557452762816792 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46960879 chr16:46960881 synonymous SNV . 0 23 hm5C_associated_SNPs_58164 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:46960859-46960888
64251 chr1 236925903 236925903 1 + G T LUSC 236925901 + 236925881 236925921 41 GCGTTCTCTTCCGCACTCTACGGGGAGAGCGATCTGTGATG GCGTTCTCTTCCGCACTCTACGTGGAGAGCGATCTGTGATG < 41bp 0.778720915505736 0.441054834174265 0.88532037 0.2106553 prediction 0.557441831011473 Functional Loss - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236925901 chr1:236925903 nonsynonymous SNV 0.749 4 23 hm5C_associated_SNPs_58166 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:236925872-236925916
64251 chr2 44547565 44547565 1 - C G LUAD 44547566 - 44547546 44547586 41 TAACCTTATTCTCATTTTAGCGGGAAGGCCCGAAATCATAT TAACCTTATTCTCATTTTAGCCGGAAGGCCCGAAATCATAT < 41bp 0.785524402144383 0.506812566755294 0.6134898 0.17090821 prediction 0.557423670778179 Functional Loss - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44547566 chr2:44547565 synonymous SNV . 0 22 hm5C_associated_SNPs_58170 0 0 14 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:44547559-44547590
64251 chr19 7712265 7712265 1 + A T KIRP 7712261 + 7712241 7712281 41 GCCCGCTTCGGTCACTGGCACAAGAACAAGGCTGGCATAGA GCCCGCTTCGGTCACTGGCACAAGTACAAGGCTGGCATAGA < 41bp 0.805076472769546 0.526374420893 0.85501504 0.7955595 prediction 0.557404103753092 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712261 chr19:7712265 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_58171 0 0 1 RPS3 POSTAR2 ENCODE chr19:7712261-7712332
64251 chr10 126523124 126523124 1 + G T LUSC 126523122 + 126523102 126523142 41 GCCGTCTGAAAGCTTGGACCCAGCGTTCAGTCCTCGGATGC GCCGTCTGAAAGCTTGGACCCATCGTTCAGTCCTCGGATGC < 41bp 0.778690088200423 0.451796746792009 0.5319506 0.088834256 prediction 0.557380176400846 Functional Loss - ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126523122 chr10:126523124 nonsynonymous SNV 0.036 0 23 hm5C_associated_SNPs_58173 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:126523103-126523134
64251 chr2 234072416 234072416 1 + G T THCA 234072413 + 234072393 234072433 41 CTCCAAGGGGCAGGGAAAGACGCGGGACGACTCTGCGGACT CTCCAAGGGGCAGGGAAAGACGCTGGACGACTCTGCGGACT < 41bp 0.900130850698191 0.621453312426473 0.36798322 0.21634033 prediction 0.557355076543437 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234072413 chr2:234072416 nonsynonymous SNV 0.989 3 24 hm5C_associated_SNPs_58175 0 0 1 GRWD1 POSTAR2 ENCODE chr2:234072385-234072427
64251 chr9 38396243 38396243 1 + G T LUSC 38396241 + 38396221 38396261 41 AGACCATCCCCATGGATGGCCAGCATTTCTGCTTCACCCGG AGACCATCCCCATGGATGGCCATCATTTCTGCTTCACCCGG < 41bp 0.778668934800262 0.444731293578205 0.09883794 0.06659663 prediction 0.557337869600524 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396241 chr9:38396243 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_58177 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:38396180-38396280
64251 chr2 132021677 132021677 1 + G T LUAD 132021675 + 132021655 132021695 41 TGCGCCTAGACCTGGCTGGGCGGGAACTGCCTGACTACCTC TGCGCCTAGACCTGGCTGGGCGTGAACTGCCTGACTACCTC < 41bp 0.852828448538694 0.574161766635516 0.6785793 0.1547738 prediction 0.557333363806354 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021675 chr2:132021677 synonymous SNV . 0 23 hm5C_associated_SNPs_58178 0 0 2 EIF3H POSTAR2 ENCODE chr2:132021649-132021712
64251 chr7 127326695 127326695 1 + G C LUSC 127326694 + 127326674 127326714 41 CAGGGTGCGCCATCATTGTCCGAGGTCAGCCTCGTGGTGGG CAGGGTGCGCCATCATTGTCCCAGGTCAGCCTCGTGGTGGG < 41bp 0.789523596413954 0.510872642373133 0.89710027 0.5539382 prediction 0.557301908081641 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127326694 chr7:127326695 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_58179 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:127326674-127326700
64251 chr1 204380834 204380834 1 - C A rs540637528 204380837 - 204380817 204380857 41 CGGAAAACCATCGCCGAGGCCGTGGGGGGACTCCTATCCAT CGGAAAACCATCGCCGAGGCCGTTGGGGGACTCCTATCCAT < 41bp 0.778648935919986 0.437132663864946 0.3904299 0.32862532 prediction 0.557297871839972 Functional Loss - PPP1R15B ENSG00000226330 ncRNA_intronic Human antisense chr1:204380837 chr1:204380834 . . 0 24 hm5C_associated_SNPs_58180 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:204380772-204380852
64251 chr5 135489691 135489691 1 + G T UCEC 135489689 + 135489669 135489709 41 GGACGCCTGCAGGTTTCTCACAGAAAAGGCTTACCCCATGT GGACGCCTGCAGGTTTCTCACATAAAAGGCTTACCCCATGT < 41bp 0.840631889207633 0.561994445812098 0.51521176 0.31451675 prediction 0.55727488679107 Functional Loss - SMAD5 ENSG00000113658 CDS Human protein_coding chr5:135489689 chr5:135489691 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_58182 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr5:135489637-135489692
64251 chr2 136530108 136530108 1 + G T COAD 136530105 + 136530085 136530125 41 AGTCAAGAGGGAATCTTATGCAAGAGAAAGAAGGTACTATA AGTCAAGAGGGAATCTTATGCAATAGAAAGAAGGTACTATA < 41bp 0.885662418264707 0.607032170402357 0.8577396 0.36789304 prediction 0.557260495724701 Functional Loss - UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136530105 chr2:136530108 nonsynonymous SNV 0.797 2 24 hm5C_associated_SNPs_58183 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:136530093-136530114
64251 chr1 226027006 226027006 1 + G T STAD 226027003 + 226026983 226027023 41 TTCTACATTCAAGGAGGGGACTGGGGGTCCCTGATCTGCAC TTCTACATTCAAGGAGGGGACTGTGGGTCCCTGATCTGCAC < 41bp 0.901897934128598 0.623269458925605 0.9042113 0.485755 prediction 0.557256950405987 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027003 chr1:226027006 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_58184 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:226026964-226027006
64251 chr17 46024064 46024064 1 + G T LUSC 46024062 + 46024042 46024082 41 ATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGAT ATGACCGGATAGTCTTTCGGCGTGGCCTACCCACAGGAGAT < 41bp 0.846617793998483 0.568001791168312 0.9067888 0.17010045 prediction 0.557232005660342 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46024062 chr17:46024064 synonymous SNV . 0 23 hm5C_associated_SNPs_58185 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:46024049-46024076
64251 chr16 1555456 1555456 1 + G T LUAD 1555453 + 1555433 1555473 41 AGCTGTCTAGGCCTGGGTGCCTCGGGAGGACTCCCCAACCT AGCTGTCTAGGCCTGGGTGCCTCTGGAGGACTCCCCAACCT < 41bp 0.900795608008321 0.622186503364687 0.46829396 0.32852322 prediction 0.557218209287268 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1555453 chr16:1555456 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_58187 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1555438-1555470
64251 chr8 145745747 145745747 1 + A T rs146976820 145745743 + 145745723 145745763 41 CTCGCACATGCATTGCCCAGCAGCAGGGTGGGGCCGCAGAG CTCGCACATGCATTGCCCAGCAGCTGGGTGGGGCCGCAGAG < 41bp 0.778544259924092 0.470904367182205 0.8007232 0.77456033 prediction 0.557088519848184 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745743 chr8:145745747 nonsynonymous SNV 0.872 0 25 hm5C_associated_SNPs_58196 0 0 1 EIF3H POSTAR2 ENCODE chr8:145745743-145745809
64251 chrX 49021349 49021349 1 + G T LUAD 49021347 + 49021327 49021367 41 GGCCTCACCTTAGGTGGGGGCCGGGATGTAGCTGGGGACAC GGCCTCACCTTAGGTGGGGGCCTGGATGTAGCTGGGGACAC < 41bp 0.77852018514922 0.429303636179955 0.897719 0.8732722 prediction 0.55704037029844 Functional Loss - MAGIX ENSG00000017621 CDS Human other chrX:49021347 chrX:49021349 nonsynonymous SNV 0.072 2 23 hm5C_associated_SNPs_58202 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chrX:49021340-49021360
64251 chr9 139243213 139243213 1 + G T LUSC 139243211 + 139243191 139243231 41 GGGACCTGCTGAGACTCCCCCTGGAGCGGGTGAGCCAGGGA GGGACCTGCTGAGACTCCCCCTTGAGCGGGTGAGCCAGGGA < 41bp 0.848641548042981 0.570123569698268 0.8434857 0.20226595 prediction 0.557035956689425 Functional Loss - GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139243211 chr9:139243213 synonymous SNV . 0 23 hm5C_associated_SNPs_58203 0 0 3 CSTF2T POSTAR2 ENCODE chr9:139243174-139243234
64251 chr17 48827999 48827999 1 + G T GBM 48827997 + 48827977 48828017 41 GACCAGTGAAGACATTAAATCTGAAGGTGACACTCAGTCCA GACCAGTGAAGACATTAAATCTTAAGGTGACACTCAGTCCA < 41bp 0.778503929146307 0.494673475935886 0.21517342 0.15327299 prediction 0.557007858292615 Functional Loss - LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48827997 chr17:48827999 stopgain 1.000 1 23 hm5C_associated_SNPs_58206 0 0 53 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48827854-48828013
64251 chr14 101521026 101521026 1 + G T LUSC 101521024 + 101521004 101521044 41 ATGTTGGTGTCAGCACCGTCCAGGGTGTGTGACTGGTTGAC ATGTTGGTGTCAGCACCGTCCATGGTGTGTGACTGGTTGAC < 41bp 0.83016205328361 0.551682604876252 0.86776733 0.40515375 prediction 0.556958896814715 Functional Loss - MIR134 ENSG00000207993 ncRNA_exonic Human miRNA chr14:101521024 chr14:101521026 . . 0 23 hm5C_associated_SNPs_58213 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101521020-101521040
64251 chr22 50962103 50962103 1 - C G rs200605042 50962104 - 50962084 50962124 41 TTACTACGGCCGGAGCAGATCGGCTGAGCAGATCTCAGACA TTACTACGGCCGGAGCAGATCCGCTGAGCAGATCTCAGACA < 41bp 0.798576685594538 0.520105445263181 0.717072 0.3882298 prediction 0.556942480662712 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962104 chr22:50962103 synonymous SNV . 0 22 hm5C_associated_SNPs_58216 2 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50962100-50962140
64251 chr16 27363941 27363941 1 + G T LUSC 27363938 + 27363918 27363958 41 CTGAAGTCTGGGATTTCCTACAGGGCACGGGTGAGGGCCTG CTGAAGTCTGGGATTTCCTACAGTGCACGGGTGAGGGCCTG < 41bp 0.778470515937678 0.375833031196369 0.62172395 0.20947552 prediction 0.556941031875356 Functional Loss - IL4R ENSG00000077238 CDS Human protein_coding chr16:27363938 chr16:27363941 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_58217 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:27363938-27363969
64251 chr13 39613332 39613332 1 + G T BLCA 39613330 + 39613310 39613350 41 CTGAGAAAATTCTTTACCGGCTGGATGTGGGTTGGCCTAAG CTGAGAAAATTCTTTACCGGCTTGATGTGGGTTGGCCTAAG < 41bp 0.843072307700857 0.564619403262821 0.37975124 0.27459168 prediction 0.556905808876072 Functional Loss - NHLRC3 ENSG00000188811 CDS Human protein_coding chr13:39613330 chr13:39613332 synonymous SNV . 0 23 hm5C_associated_SNPs_58218 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:39613300-39613359
64251 chr12 27109494 27109494 1 + G T UCEC 27109491 + 27109471 27109511 41 ATTAGTATCAGGAAGAAATTCAAGAACTTAATGAAGTCGCG ATTAGTATCAGGAAGAAATTCAATAACTTAATGAAGTCGCG < 41bp 0.886335054929579 0.607909283106458 0.28245875 0.20137233 prediction 0.556851543646242 Functional Loss - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27109491 chr12:27109494 stopgain 1.000 0 24 hm5C_associated_SNPs_58222 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:27109476-27109503
64251 chr1 46806555 46806555 1 + G T UCEC 46806552 + 46806532 46806572 41 CTGCTGAAGCGTGTGGACCTCGCGACGGTCCCGCGGAGACA CTGCTGAAGCGTGTGGACCTCGCTACGGTCCCGCGGAGACA < 41bp 0.885376081558132 0.606952861946703 0.77399975 0.39663193 prediction 0.556846439222857 Functional Loss - NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46806552 chr1:46806555 synonymous SNV . 0 24 hm5C_associated_SNPs_58223 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46806555-46806583
64251 chr22 26091109 26091109 1 + A T COAD 26091105 + 26091085 26091125 41 GGTACATGGCTCCCGAGGTGCTGCAGAAGGGGACGGCCTAT GGTACATGGCTCCCGAGGTGCTGCTGAAGGGGACGGCCTAT < 41bp 0.778421238956256 0.455766472322701 0.34186223 0.2628653 prediction 0.556842477912512 Functional Loss - GRK3 ENSG00000100077 CDS Human protein_coding chr22:26091105 chr22:26091109 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_58224 0 0 3 BUD13 POSTAR2 ENCODE chr22:26091032-26091144
64251 chrX 47041247 47041247 1 + G T LUAD 47041244 + 47041224 47041264 41 CGGCTACCAGCCCCACTGCCCAGGAATCCTACAGCCAGTAC CGGCTACCAGCCCCACTGCCCAGTAATCCTACAGCCAGTAC < 41bp 0.90205757340995 0.623659874206867 0.23277268 0.4086214 prediction 0.556795398406165 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47041244 chrX:47041247 stopgain 0.997 0 24 hm5C_associated_SNPs_58228 0 0 2 GRWD1 POSTAR2 ENCODE chrX:47041206-47041255
64251 chr16 1748833 1748833 1 + G T LUSC 1748830 + 1748810 1748850 41 AGCTGCAAGGAGCATCCCGGCTGGAGCAGAGCCAGGTGAGA AGCTGCAAGGAGCATCCCGGCTGTAGCAGAGCCAGGTGAGA < 41bp 0.897038983090803 0.618642544285142 0.5719251 0.22869784 prediction 0.556792877611323 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748830 chr16:1748833 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_58230 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1748809-1748847
64251 chr9 36671142 36671142 1 + A T COAD 36671138 + 36671118 36671158 41 GAGCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAAGAC GAGCAAAAGGAAGGGTTCTGCCAGTGACGGGCCCAGAAGAC < 41bp 0.778391991208638 0.482300676019529 0.8291464 0.62538236 prediction 0.556783982417275 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36671138 chr9:36671142 nonsynonymous SNV 0.205 1 25 hm5C_associated_SNPs_58231 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36671124-36671163
64251 chr11 107799349 107799349 1 + G T HNSC 107799347 + 107799327 107799367 41 CATCGTGATCGGGGACTCCACCGTGGGCAAGTCCTGCCTCC CATCGTGATCGGGGACTCCACCTTGGGCAAGTCCTGCCTCC < 41bp 0.778391309518854 0.435642044262587 0.89327466 0.15869203 prediction 0.556782619037709 Functional Loss - RAB39A ENSG00000179331 CDS Human protein_coding chr11:107799347 chr11:107799349 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_58232 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:107799333-107799362
64251 chr10 74990256 74990256 1 + G T UCEC 74990253 + 74990233 74990273 41 TCATGGAATGCCTCTACAGCCAAGAAATCTCTCCCTAATGG TCATGGAATGCCTCTACAGCCAATAAATCTCTCCCTAATGG < 41bp 0.778388304995418 0.408660362654147 0.28355828 0.04730794 prediction 0.556776609990836 Functional Loss - FAM149B1 ENSG00000138286 CDS Human protein_coding chr10:74990253 chr10:74990256 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_58233 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:74990211-74990256
64251 chr16 30680962 30680962 1 + G T COAD 30680960 + 30680940 30680980 41 CCTGGCCCAGCTCGGGCTGACAGGTGAGGGGAACGGGGGGG CCTGGCCCAGCTCGGGCTGACATGTGAGGGGAACGGGGGGG < 41bp 0.860833305365162 0.58247044013279 0.9410273 0.8677091 prediction 0.556725730464744 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680960 chr16:30680962 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_58236 0 0 1 XRN2 POSTAR2 ENCODE chr16:30680959-30681006
64251 chr5 133482060 133482060 1 + G T UCEC 133482058 + 133482038 133482078 41 TCTGCTGCCCCGCTTCCCCACAGAACTGCTTACTAGCCCTG TCTGCTGCCCCGCTTCCCCACATAACTGCTTACTAGCCCTG < 41bp 0.778344812243711 0.457479451688918 0.31676865 0.15186843 prediction 0.556689624487423 Functional Loss - TCF7 ENSG00000081059;ENSG00000081059 exonic;splicing Human other chr5:133482058 chr5:133482060 stopgain 0.991 0 23 hm5C_associated_SNPs_58238 0 0 4 IGF2BP3 POSTAR2 ENCODE chr5:133482036-133482114
64251 chr9 117405509 117405509 1 + G T LUAD 117405506 + 117405486 117405526 41 CAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCC CAGGCAATGGGGACACGACACACTAACTCTCCGAGAATTCC < 41bp 0.778318936117746 0.404056344485558 0.0684973 0.11081684 prediction 0.556637872235491 Functional Loss - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117405506 chr9:117405509 synonymous SNV . 0 24 hm5C_associated_SNPs_58243 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:117405448-117405517
64251 chr18 77894245 77894245 1 + G T LUAD 77894243 + 77894223 77894263 41 GACTGTGGCCCAGGGTGCCCCTGGAAGCCTCACTCATTCCC GACTGTGGCCCAGGGTGCCCCTTGAAGCCTCACTCATTCCC < 41bp 0.856554749537237 0.578253414151425 0.12154427 0.0509516 prediction 0.556602670771623 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894243 chr18:77894245 stopgain 0.024 1 23 hm5C_associated_SNPs_58249 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:77894237-77894294
64251 chr20 21367597 21367597 1 + G T BLCA 21367595 + 21367575 21367615 41 AAACCAGTACCAGATGCTAGCTGGGCCTGGTGGGTATCCAC AAACCAGTACCAGATGCTAGCTTGGCCTGGTGGGTATCCAC < 41bp 0.778254296129743 0.440398118769879 0.54527396 0.08464038 prediction 0.556508592259487 Functional Loss - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21367595 chr20:21367597 nonsynonymous SNV 0.049 4 23 hm5C_associated_SNPs_58254 0 0 5 IGF2BP1 POSTAR2 ENCODE chr20:21367590-21367637
64251 chr18 32407638 32407638 1 + G T LUAD 32407635 + 32407615 32407655 41 TCAGGAAGTCCTTTTATTACCAGGAGGTAAGTTCCAACCCT TCAGGAAGTCCTTTTATTACCAGTAGGTAAGTTCCAACCCT < 41bp 0.77825388964274 0.480047260460898 0.8972093 0.14792776 prediction 0.556507779285481 Functional Loss - DTNA ENSG00000134769 CDS Human protein_coding chr18:32407635 chr18:32407638 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_58255 0 0 1 PPIG POSTAR2 ENCODE chr18:32407545-32407638
64251 chr1 24112837 24112837 1 + C T LUSC 24112835 + 24112815 24112855 41 TTTTCAAATGTCTATCATCTCTCAATTCATATTTCAAAAAA TTTTCAAATGTCTATCATCTCTTAATTCATATTTCAAAAAA < 41bp 0.781721619092484 0.503484019911847 0.3496879 0.15876627 prediction 0.556475198361274 Functional Loss - PITHD1 ENSG00000057757 CDS Human protein_coding chr1:24112835 chr1:24112837 nonsynonymous SNV 0.940 4 23 hm5C_associated_SNPs_58259 0 0 19 LIN28B POSTAR2 GSE44616,GSM1087851 chr1:24112820-24112840
64251 chr16 8870227 8870227 1 + G T THCA 8870225 + 8870205 8870245 41 ACCGGATCTTCAACACCTGGCTGGGGGACCCGTCCAAGAAC ACCGGATCTTCAACACCTGGCTTGGGGACCCGTCCAAGAAC < 41bp 0.77823732532705 0.432002886768934 0.224424 0.023704082 prediction 0.5564746506541 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8870225 chr16:8870227 synonymous SNV . 0 23 hm5C_associated_SNPs_58260 0 0 4 PPIG POSTAR2 ENCODE chr16:8870198-8870304
64251 chr14 24108149 24108149 1 + A T LUAD 24108145 + 24108125 24108165 41 AGGCTTTCTGTGAGGATGAGCAGCACCGGGATAGACAGGAA AGGCTTTCTGTGAGGATGAGCAGCTCCGGGATAGACAGGAA < 41bp 0.81468471821729 0.536449915087861 0.33685833 0.40138537 prediction 0.556469606258857 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108145 chr14:24108149 nonsynonymous SNV 0.079 0 25 hm5C_associated_SNPs_58261 0 0 4 GRWD1 POSTAR2 ENCODE chr14:24108126-24108159
64251 chr3 111732356 111732356 1 + G T COAD 111732354 + 111732334 111732374 41 GCAGCAACAAGGGAGCCTCCCAGGCGGGCATGACAGGGTAC GCAGCAACAAGGGAGCCTCCCATGCGGGCATGACAGGGTAC < 41bp 0.862468830923746 0.584248894801235 0.83207405 0.11922625 prediction 0.556439872245021 Functional Loss - TAGLN3 ENSG00000144834 CDS Human protein_coding chr3:111732354 chr3:111732356 nonsynonymous SNV 0.992 5 23 hm5C_associated_SNPs_58264 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr3:111732340-111732360
64251 chr7 45930178 45930178 1 + G T SKCM 45930175 + 45930155 45930195 41 AGCCCTGAAAGCCCAGAGAGCACGGAGATAACTGAGGAGGA AGCCCTGAAAGCCCAGAGAGCACTGAGATAACTGAGGAGGA < 41bp 0.778217887824616 0.38420847999717 0.44172913 0.46949083 prediction 0.556435775649231 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45930175 chr7:45930178 synonymous SNV . 0 24 hm5C_associated_SNPs_58265 0 0 7 AUH POSTAR2 ENCODE chr7:45930178-45930206
64251 chr1 220870050 220870050 1 + A T STAD 220870046 + 220870026 220870066 41 TCCGCCCCGTTTGCGGTAGCCACCAGCGTGGTATCCTTCGT TCCGCCCCGTTTGCGGTAGCCACCTGCGTGGTATCCTTCGT < 41bp 0.816858728915519 0.53865666927838 0.41403198 0.35513818 prediction 0.556404119274277 Functional Loss - C1orf115 ENSG00000162817 CDS Human protein_coding chr1:220870046 chr1:220870050 nonsynonymous SNV 0.549 2 25 hm5C_associated_SNPs_58271 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:220869987-220870051
64251 chrX 18912389 18912389 1 - C A STAD 18912391 - 18912371 18912411 41 CTCTCGGACACGGAGATGACCAGCATCGGGGGCATCATCCA CTCTCGGACACGGAGATGACCATCATCGGGGGCATCATCCA < 41bp 0.778192839667757 0.441943424890324 0.07495326 0.011860371 prediction 0.556385679335514 Functional Loss - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912391 chrX:18912389 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_58274 0 0 3 DDX55 POSTAR2 ENCODE chrX:18912318-18912397
64251 chr12 57485373 57485373 1 + G T KICH 57485371 + 57485351 57485391 41 GACCTGGGGCAGGGGACCCCCGGATCTGGCCAGGCCGGAGC GACCTGGGGCAGGGGACCCCCGTATCTGGCCAGGCCGGAGC < 41bp 0.778188240372608 0.431270758097236 0.726252 0.32040077 prediction 0.556376480745217 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485371 chr12:57485373 synonymous SNV . 0 23 hm5C_associated_SNPs_58275 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:57485331-57485377
64251 chr9 125746965 125746965 1 + G T UCEC 125746963 + 125746943 125746983 41 ATTAGTAGGGCTCCAAAAACCAGAGATGAGCCTACCAGTGA ATTAGTAGGGCTCCAAAAACCATAGATGAGCCTACCAGTGA < 41bp 0.778184966907348 0.455922737155948 0.9060327 0.63363135 prediction 0.556369933814695 Functional Loss - RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125746963 chr9:125746965 stopgain 1.000 1 23 hm5C_associated_SNPs_58277 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:125746959-125746999
64251 chr20 34090551 34090551 1 + G T ACC 34090548 + 34090528 34090568 41 TCCAGGAACTGGAGAAGCAACGGGAAATGCAGAAGGCTGCT TCCAGGAACTGGAGAAGCAACGGTAAATGCAGAAGGCTGCT < 41bp 0.778181936357747 0.416131621626274 0.8333165 0.4787946 prediction 0.556363872715495 Functional Loss - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34090548 chr20:34090551 stopgain 0.998 1 24 hm5C_associated_SNPs_58278 0 0 4 BUD13 POSTAR2 ENCODE chr20:34090475-34090551
64251 chrX 48433596 48433596 1 + G C GBM 48433595 + 48433575 48433615 41 TCTGAAGAAGGAAAGCTCTTCGTGGGAGGGCTCAACTTTAA TCTGAAGAAGGAAAGCTCTTCCTGGGAGGGCTCAACTTTAA < 41bp 0.778173703399049 0.473129251766363 0.77949375 0.10917699 prediction 0.556347406798097 Functional Loss - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48433595 chrX:48433596 nonsynonymous SNV 0.977 1 22 hm5C_associated_SNPs_58280 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48433558-48433660
64251 chr3 185316311 185316311 1 + G T LUSC 185316308 + 185316288 185316328 41 AACTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAG AACTTCTGCTTGTAATGGAACACTGAATGTGGCCCCTTCAG < 41bp 0.778152541601684 0.387246189711917 0.14189169 0.0798212 prediction 0.556305083203369 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185316308 chr3:185316311 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_58283 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:185316305-185316328
64251 chr22 50278348 50278348 1 + G T LUAD 50278345 + 50278325 50278365 41 GTGTTGCAGGAGAACGGGGGCACGGGCATCCCGCCACTGTA GTGTTGCAGGAGAACGGGGGCACTGGCATCCCGCCACTGTA < 41bp 0.77815039554607 0.389991372785417 0.5872137 0.19495377 prediction 0.55630079109214 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278345 chr22:50278348 synonymous SNV . 0 24 hm5C_associated_SNPs_58284 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50278340-50278360
64251 chr9 4844549 4844549 1 + G T rs77526515 4844547 + 4844527 4844567 41 CTCCGGGCTTTGGGTTGTCACTGGTTGCTGAGACCACCAGT CTCCGGGCTTTGGGTTGTCACTTGTTGCTGAGACCACCAGT < 41bp 0.778126366381259 0.448616231994451 0.73418397 0.49729136 prediction 0.556252732762517 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4844547 chr9:4844549 synonymous SNV . 0 23 hm5C_associated_SNPs_58288 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr9:4844534-4844553
64251 chr15 100214679 100214679 1 + G T UCEC 100214677 + 100214657 100214697 41 TGCTTTGTCCTACACTAACCCAGGGAGTTCACTGGTGTCCC TGCTTTGTCCTACACTAACCCATGGAGTTCACTGGTGTCCC < 41bp 0.856307821057445 0.578205811407375 0.9067824 0.6101737 prediction 0.556204019300141 Functional Loss - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100214677 chr15:100214679 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_58292 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr15:100214660-100214680
64251 chr22 26886057 26886057 1 + C T UCEC 26886055 + 26886035 26886075 41 AGCCTACCATCTTTTACATGCTCCATTGTGGGACGGCCTTG AGCCTACCATCTTTTACATGCTTCATTGTGGGACGGCCTTG < 41bp 0.77810147083555 0.490539566406812 0.8926013 0.2089822 prediction 0.5562029416711 Functional Loss - SRRD ENSG00000100104 CDS Human protein_coding chr22:26886055 chr22:26886057 synonymous SNV . 0 23 hm5C_associated_SNPs_58293 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:26886028-26886057
64251 chr1 173799882 173799882 1 + G T LUSC 173799880 + 173799860 173799900 41 TGGTACAGTCATTTCCCGTCCTGCAGGACAAGAGAATCCAG TGGTACAGTCATTTCCCGTCCTTCAGGACAAGAGAATCCAG < 41bp 0.778089237264786 0.456313657659053 0.29532844 0.22249341 prediction 0.556178474529573 Functional Loss - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173799880 chr1:173799882 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_58294 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:173799853-173799882
64251 chr19 14557291 14557291 1 + G T GBM 14557288 + 14557268 14557308 41 ATGTTGCAGGACAGTAAGACCAAGATTGACATCATCCGCAT ATGTTGCAGGACAGTAAGACCAATATTGACATCATCCGCAT < 41bp 0.887948574846645 0.60986457416293 0.41580576 0.15948635 prediction 0.55616800136743 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14557288 chr19:14557291 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_58296 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:14557269-14557294
64251 chr1 114454175 114454175 1 + G T LUSC 114454172 + 114454152 114454192 41 GGATCTCCGTGCCCCTGATTCCGGACTCTGTACAGCAATAC GGATCTCCGTGCCCCTGATTCCGTACTCTGTACAGCAATAC < 41bp 0.778077237542718 0.389800763355377 0.4164269 0.16170213 prediction 0.556154475085435 Functional Loss - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114454172 chr1:114454175 nonsynonymous SNV 0.367 1 24 hm5C_associated_SNPs_58298 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:114454144-114454181
64251 chr20 2097700 2097700 1 + G T COAD 2097697 + 2097677 2097717 41 TTCTACATGGCTCCTGAAGTCTGGGAGGGACACTACACAGC TTCTACATGGCTCCTGAAGTCTGTGAGGGACACTACACAGC < 41bp 0.778058567157292 0.397086268835734 0.80503523 0.3352332 prediction 0.556117134314584 Functional Loss - STK35 ENSG00000125834 CDS Human protein_coding chr20:2097697 chr20:2097700 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58300 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:2097670-2097708
64251 chr7 157174993 157174993 1 + A T UCEC 157174989 + 157174969 157175009 41 CGAAGGGGTCCCCGAGGAAGCAGAAGCCGAGGGACGGGGTC CGAAGGGGTCCCCGAGGAAGCAGATGCCGAGGGACGGGGTC < 41bp 0.781587472494121 0.503537294761463 0.8507252 0.8928579 prediction 0.556100355465315 Functional Loss - DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157174989 chr7:157174993 nonsynonymous SNV 0.358 2 25 hm5C_associated_SNPs_58303 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:157174991-157175023
64251 chr12 4796259 4796259 1 + G T COAD 4796256 + 4796236 4796276 41 ATTGAGGATGTGAAGCCGGCCAAGACCGTCAACATTTAGTG ATTGAGGATGTGAAGCCGGCCAATACCGTCAACATTTAGTG < 41bp 0.778045320959562 0.406053335619021 0.1965597 0.1550551 prediction 0.556090641919123 Functional Loss - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4796256 chr12:4796259 nonsynonymous SNV 0.337 1 24 hm5C_associated_SNPs_58304 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:4796208-4796265
64251 chr19 9267424 9267424 1 + G T COAD 9267422 + 9267402 9267442 41 ACACACCCAGTGTTGGTTCCCAGGTGCACTAAGATCTCTGG ACACACCCAGTGTTGGTTCCCATGTGCACTAAGATCTCTGG < 41bp 0.778029100756642 0.423624791799991 0.91516566 0.8125614 prediction 0.556058201513285 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9267422 chr19:9267424 nonsynonymous SNV 0.197 1 23 hm5C_associated_SNPs_58308 0 0 2 PRPF8 POSTAR2 ENCODE chr19:9267422-9267493
64251 chr17 41152060 41152060 1 + G T UCEC 41152057 + 41152037 41152077 41 ATGGGCAAGAAGAAGATCGCCAAGAGATCAAAGATAAAATC ATGGGCAAGAAGAAGATCGCCAATAGATCAAAGATAAAATC < 41bp 0.890273521951087 0.612246953948538 0.80612946 0.11499184 prediction 0.556053136005098 Functional Loss - RPL27 ENSG00000131469 CDS Human protein_coding chr17:41152057 chr17:41152060 nonsynonymous SNV 0.987 2 24 hm5C_associated_SNPs_58309 0 0 53 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41151949-41152119
64251 chrX 70443570 70443570 1 + G T UCEC 70443568 + 70443548 70443588 41 ATGAGGCAGGATGAACTGGACAGGTTTGTACACCTTGCTCA ATGAGGCAGGATGAACTGGACATGTTTGTACACCTTGCTCA < 41bp 0.77802622996482 0.438842518620458 0.5965776 0.32005632 prediction 0.556052459929639 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70443568 chrX:70443570 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_58310 0 0 1 DDX3X POSTAR2 ENCODE chrX:70443540-70443599
64251 chr13 49039374 49039374 1 + C T CESC 49039372 + 49039352 49039392 41 GTCACCAATACCTCACATTCCTCGAAGCCCTTACAAGTTTC GTCACCAATACCTCACATTCCTTGAAGCCCTTACAAGTTTC < 41bp 0.797093517959416 0.519075383775323 0.5593939 0.087031275 prediction 0.556036268368185 Functional Loss - RB1 ENSG00000139687 CDS Human protein_coding chr13:49039372 chr13:49039374 stopgain 1.000 1 23 hm5C_associated_SNPs_58311 3 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr13:49039352-49039375
64251 chr11 72554312 72554312 1 - G A UCEC 72554314 - 72554294 72554334 41 AAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCAT AAGTACCTACAGTTTCCCACCTTGAACAGCCTCCTGAGCAT < 41bp 0.806507628518155 0.528516342900666 0.34921104 0.02592948 prediction 0.555982571234979 Functional Loss - FCHSD2 ENSG00000137478 CDS Human protein_coding chr11:72554314 chr11:72554312 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58315 0 0 1 GRWD1 POSTAR2 ENCODE chr11:72554248-72554331
64251 chr5 115327891 115327891 1 + G T UCEC 115327889 + 115327869 115327909 41 ACTAATGATATTTGATGAATCAGGATTGTTGTTGGAACCAA ACTAATGATATTTGATGAATCATGATTGTTGTTGGAACCAA < 41bp 0.836781973138157 0.558791867829454 0.37925363 0.07406056 prediction 0.555980210617407 Functional Loss - LVRN ENSG00000172901 CDS Human protein_coding chr5:115327889 chr5:115327891 stopgain 0.066 0 23 hm5C_associated_SNPs_58316 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:115327889-115327907
64251 chr20 44050083 44050083 1 + A C LUSC 44050079 + 44050059 44050099 41 ACGTGAGTGGCTATGGGCTGCAGAAGGGGGAGCTGAGCACA ACGTGAGTGGCTATGGGCTGCAGACGGGGGAGCTGAGCACA < 41bp 0.777981014002846 0.443358778620027 0.7555717 0.45997095 prediction 0.555962028005692 Functional Loss - PIGT ENSG00000124155 CDS Human protein_coding chr20:44050079 chr20:44050083 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_58319 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:44050080-44050100
64251 chr17 21203896 21203896 1 + G T COAD 21203894 + 21203874 21203914 41 TGATGACTTGGTGACCATCTCAGAACTGGGCCGTGGAGCCT TGATGACTTGGTGACCATCTCATAACTGGGCCGTGGAGCCT < 41bp 0.777967115950208 0.442688240817175 0.87841785 0.1571697 prediction 0.555934231900415 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21203894 chr17:21203896 stopgain 0.906 1 23 hm5C_associated_SNPs_58320 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:21203883-21203909
64251 chr19 10822901 10822901 1 + G C STAD 10822900 + 10822880 10822920 41 GAGCGGGGGTGAGAGCAAGTCGCAGTTCTGGCGGATGGTGG GAGCGGGGGTGAGAGCAAGTCCCAGTTCTGGCGGATGGTGG < 41bp 0.813916104184673 0.535949119934681 0.7457664 0.5930537 prediction 0.555933968499985 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10822900 chr19:10822901 synonymous SNV . 0 22 hm5C_associated_SNPs_58321 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:10822867-10822952
64251 chr16 67262467 67262467 1 + G T SARC 67262465 + 67262445 67262485 41 TATGAGCTCGATGGCACGAGCAGCGTTCTCTGAGGATGGGG TATGAGCTCGATGGCACGAGCATCGTTCTCTGAGGATGGGG < 41bp 0.777936373580594 0.443995734344096 0.34498653 0.14780599 prediction 0.555872747161188 Functional Loss - TMEM208 ENSG00000168701 CDS Human protein_coding chr16:67262465 chr16:67262467 nonsynonymous SNV 0.971 0 23 hm5C_associated_SNPs_58325 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:67262444-67262481
64251 chr12 124103252 124103252 1 + G T SARC 124103250 + 124103230 124103270 41 GATGAAGCCCCAGAGAAACACAGCGGACCTTCTGCCAAAAC GATGAAGCCCCAGAGAAACACATCGGACCTTCTGCCAAAAC < 41bp 0.777924594633602 0.435187982587145 0.8983449 0.79551923 prediction 0.555849189267203 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124103250 chr12:124103252 nonsynonymous SNV 0.063 0 23 hm5C_associated_SNPs_58328 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124103240-124103293
64251 chr11 47178701 47178701 1 + G C LUSC 47178700 + 47178680 47178720 41 TGCCTTGGGCGGGGCCGGCACGCTGGAGGGCGTGGAGGCGT TGCCTTGGGCGGGGCCGGCACCCTGGAGGGCGTGGAGGCGT < 41bp 0.812326190430602 0.534431612569648 0.5110545 0.3692238 prediction 0.555789155721907 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47178700 chr11:47178701 synonymous SNV . 0 22 hm5C_associated_SNPs_58331 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:47178681-47178701
64251 chr3 73004381 73004381 1 + G C HNSC 73004380 + 73004360 73004400 41 GCAGCCATGGCCCCTGAGCACGAAATCCCCAAGATTGGCTG GCAGCCATGGCCCCTGAGCACCAAATCCCCAAGATTGGCTG < 41bp 0.824280459959263 0.546398168590625 0.41996378 0.21693775 prediction 0.555764582737275 Functional Loss - GXYLT2 ENSG00000172986 CDS Human protein_coding chr3:73004380 chr3:73004381 nonsynonymous SNV 0.744 4 22 hm5C_associated_SNPs_58333 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:73004349-73004381
64251 chr14 74531566 74531566 1 - G A UCEC 74531568 - 74531548 74531588 41 AATGTTCTCATTCACCGGCTCTCGATCCTCCTTCAGGGGAG AATGTTCTCATTCACCGGCTCTTGATCCTCCTTCAGGGGAG < 41bp 0.803822468684002 0.525952952609179 0.7001427 0.11330423 prediction 0.555739032149647 Functional Loss - ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74531568 chr14:74531566 stopgain 1.000 1 23 hm5C_associated_SNPs_58335 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:74531558-74531590
64251 chr15 85326210 85326210 1 + C T LUSC 85326208 + 85326188 85326228 41 ATTCCGGGGCTCAGATCTGCCTCCAGATCCCCACAACTGTG ATTCCGGGGCTCAGATCTGCCTTCAGATCCCCACAACTGTG < 41bp 0.777771010082158 0.494866812778547 0.94338924 0.11587298 prediction 0.555542020164317 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326208 chr15:85326210 nonsynonymous SNV 0.960 0 23 hm5C_associated_SNPs_58350 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:85326180-85326215
64251 chr1 1421543 1421543 1 + G T UCEC 1421540 + 1421520 1421560 41 GCCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTA GCCATAGCAACCAGGAACACCAATAAGAACCGGGGCCTGTA < 41bp 0.777766530182752 0.383800562307312 0.8593281 0.7676775 prediction 0.555533060365504 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421540 chr1:1421543 nonsynonymous SNV 0.145 5 24 hm5C_associated_SNPs_58352 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1421518-1421546
64251 chr1 38478481 38478481 1 + G T LUSC 38478479 + 38478459 38478499 41 CCAAGGCTGTACAGACATGGCGGCGGCTTTTCGGAAGGCGG CCAAGGCTGTACAGACATGGCGTCGGCTTTTCGGAAGGCGG < 41bp 0.777764845128155 0.44774213673404 0.26590723 0.06976214 prediction 0.55552969025631 Functional Loss - UTP11 ENSG00000183520 CDS Human protein_coding chr1:38478479 chr1:38478481 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_58353 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:38478439-38478500
64251 chr16 31138587 31138587 1 + C T LIHC 31138585 + 31138565 31138605 41 CCTGGTATTTCTCACCATTCCCCGAAGACTATGGGAAACAG CCTGGTATTTCTCACCATTCCCTGAAGACTATGGGAAACAG < 41bp 0.784171801182334 0.506421289687546 0.010991037 0.0189417 prediction 0.555501022989576 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31138585 chr16:31138587 synonymous SNV . 0 23 hm5C_associated_SNPs_58355 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31138569-31138597
64251 chr5 240581 240581 1 + G T LUSC 240579 + 240559 240599 41 AGAACATCGGAACTGCGACTCAGCATGCAGAAGGTAAGAGC AGAACATCGGAACTGCGACTCATCATGCAGAAGGTAAGAGC < 41bp 0.777731775223131 0.45382284635114 0.38836515 0.1890231 prediction 0.555463550446262 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:240579 chr5:240581 nonsynonymous SNV 0.315 1 23 hm5C_associated_SNPs_58357 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:240533-240581
64251 chr9 134073614 134073614 1 + G T UCEC 134073612 + 134073592 134073632 41 ACCACGGGGGTCCCTGATGCCAGGACGGAGGCAGTACCACC ACCACGGGGGTCCCTGATGCCATGACGGAGGCAGTACCACC < 41bp 0.851474587259028 0.573785421034773 0.44356152 0.20028162 prediction 0.55537833244851 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134073612 chr9:134073614 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_58360 0 0 2 RBM15 POSTAR2 ENCODE chr9:134073565-134073617
64251 chr6 74189761 74189761 1 + G T COAD 74189759 + 74189739 74189779 41 ATTCTGACCTTATCTACCCACAGGGGTTATCTATGACGCTA ATTCTGACCTTATCTACCCACATGGGTTATCTATGACGCTA < 41bp 0.859864208892471 0.582178168361313 0.9030877 0.7575181 prediction 0.555372081062315 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74189759 chr6:74189761 nonsynonymous SNV 0.969 4 23 hm5C_associated_SNPs_58362 0 0 1 GRWD1 POSTAR2 ENCODE chr6:74189664-74189828
64251 chr1 173855116 173855116 1 + A C rs545423106 173855112 + 173855092 173855132 41 TTTCGCAAAAACCACCCTGGCTGTATACCCCTGGAGGGGCC TTTCGCAAAAACCACCCTGGCTGTCTACCCCTGGAGGGGCC < 41bp 0.777669674825372 0.37847587021522 0.23805094 0.0386993 prediction 0.555339349650745 Functional Loss - ZBTB37 ENSG00000185278 CDS Human protein_coding chr1:173855112 chr1:173855116 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_58366 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:173855096-173855123
64251 chr5 169023621 169023621 1 + G T LUSC 169023619 + 169023599 169023639 41 CTCAAACTGAATTTGAGCAGCAGGAACGGTTGCTTGCCATG CTCAAACTGAATTTGAGCAGCATGAACGGTTGCTTGCCATG < 41bp 0.777668597463856 0.447699273843429 0.72185326 0.31432816 prediction 0.555337194927711 Functional Loss - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169023619 chr5:169023621 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_58367 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:169023608-169023662
64251 chr2 27664808 27664808 1 + G T rs530832914 27664806 + 27664786 27664826 41 TCCTTTATTATTCAGGAGGGCTGGGGGGGCTCCCTGGTTCT TCCTTTATTATTCAGGAGGGCTTGGGGGGCTCCCTGGTTCT < 41bp 0.850041696262276 0.572382474798483 0.86034226 0.7173354 prediction 0.555318442927586 Functional Loss - NRBP1 ENSG00000115216 UTR3 Human protein_coding chr2:27664806 chr2:27664808 . . 0 23 hm5C_associated_SNPs_58370 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27664773-27664808
64251 chr3 122811274 122811274 1 + G T COAD 122811272 + 122811252 122811292 41 GTGAAAGGACAAGGGACCATCTGCTGGGTGGACTGTGGGTA GTGAAAGGACAAGGGACCATCTTCTGGGTGGACTGTGGGTA < 41bp 0.777657833775619 0.445058699346268 0.14013192 0.10976541 prediction 0.555315667551237 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122811272 chr3:122811274 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58371 0 0 9 LIN28B POSTAR2 ENCODE chr3:122811227-122811291
64251 chr16 20787204 20787204 1 + G T UCEC 20787202 + 20787182 20787222 41 CCAGCCTTCTGGTGGATCAACAGAAATGGAGAAGAGATGCG CCAGCCTTCTGGTGGATCAACATAAATGGAGAAGAGATGCG < 41bp 0.777618945333083 0.440808966280328 0.36104906 0.21145678 prediction 0.555237890666165 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787202 chr16:20787204 nonsynonymous SNV 0.966 1 23 hm5C_associated_SNPs_58376 0 0 2 IGF2BP1 POSTAR2 ENCODE chr16:20787170-20787231
64251 chr8 87572665 87572665 1 + A T rs2165462 87572661 + 87572641 87572681 41 TCCTCCTTCTCCTTAACCAGCTCCACAGCAGCCCCTGAGTC TCCTCCTTCTCCTTAACCAGCTCCTCAGCAGCCCCTGAGTC < 41bp 0.811529851435891 0.533948769770143 0.47543928 0.25248513 prediction 0.555162163331494 Functional Loss - CPNE3 ENSG00000085719 UTR3 Human protein_coding chr8:87572661 chr8:87572665 . . 0 25 hm5C_associated_SNPs_58378 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:87572654-87572675
64251 chr1 44438396 44438396 1 + A C rs783308 44438392 + 44438372 44438412 41 TCCTGGCACTGGCACAAGCTCAGCACATGCCCAGTAATGCG TCCTGGCACTGGCACAAGCTCAGCCCATGCCCAGTAATGCG < 41bp 0.777559889975699 0.386913216083445 0.21497545 0.3935753 prediction 0.555119779951397 Functional Loss - DPH2 ENSG00000132768 UTR3 Human protein_coding chr1:44438392 chr1:44438396 . . 0 25 hm5C_associated_SNPs_58380 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44438360-44438398
64251 chr4 38699364 38699364 1 + A C rs189687733 38699360 + 38699340 38699380 41 TGGCCCCTTGCACCGGTTAGCTAGAAGTACAGCCAGATTTC TGGCCCCTTGCACCGGTTAGCTAGCAGTACAGCCAGATTTC < 41bp 0.777532632504483 0.405888198905314 0.27051514 0.10126287 prediction 0.555065265008966 Functional Loss - KLF3 ENSG00000109787 UTR3 Human protein_coding chr4:38699360 chr4:38699364 . . 0 25 hm5C_associated_SNPs_58383 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr4:38699349-38699370
64251 chr20 34459613 34459613 1 + G T SARC 34459611 + 34459591 34459631 41 GGAAGCTGGCCAGGTCTCATCTGCACTGACTTGCCACTCCT GGAAGCTGGCCAGGTCTCATCTTCACTGACTTGCCACTCCT < 41bp 0.843888735344605 0.56637825609549 0.8375484 0.4878105 prediction 0.555020958498229 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34459611 chr20:34459613 nonsynonymous SNV 0.925 0 23 hm5C_associated_SNPs_58386 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:34459586-34459613
64251 chr11 17793833 17793833 1 + A T LUAD 17793829 + 17793809 17793849 41 GGCTTCTGGTGGGCCGTGGTCACCATGACGACCCTGGGCTA GGCTTCTGGTGGGCCGTGGTCACCTTGACGACCCTGGGCTA < 41bp 0.855421318245442 0.577914510191996 0.36717394 0.33672827 prediction 0.555013616106893 Functional Loss - KCNC1 ENSG00000129159 CDS Human protein_coding chr11:17793829 chr11:17793833 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_58388 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:17793812-17793838
64251 chr2 109429113 109429113 1 + G T UCEC 109429110 + 109429090 109429130 41 AATGAAGCAAGTGAAGAAAACAGGAAGATAGACATTCAGGC AATGAAGCAAGTGAAGAAAACAGTAAGATAGACATTCAGGC < 41bp 0.777505968745229 0.421331777603038 0.5886996 0.1797832 prediction 0.555011937490457 Functional Loss - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109429110 chr2:109429113 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_58389 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109429094-109429123
64251 chr11 64128624 64128624 1 + G T COAD 64128621 + 64128601 64128641 41 ACCAGCTCGGCATCATTTACCGAGACCTGAAACTGGAGAAT ACCAGCTCGGCATCATTTACCGATACCTGAAACTGGAGAAT < 41bp 0.777502618061272 0.385254022965436 0.8903444 0.35185316 prediction 0.555005236122543 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128621 chr11:64128624 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_58390 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr11:64128605-64128642
64251 chr5 140595923 140595923 1 + G T UCEC 140595921 + 140595901 140595941 41 CTTGTGGACATGAGCGGCACCAGGACCCTATCCCAGAGCTA CTTGTGGACATGAGCGGCACCATGACCCTATCCCAGAGCTA < 41bp 0.849840161681274 0.572338798285157 0.42717376 0.14435726 prediction 0.555002726792233 Functional Loss - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595921 chr5:140595923 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_58391 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140595884-140595935
64251 chr1 86048260 86048260 1 + A T CESC 86048256 + 86048236 86048276 41 TGCCGCCTTGTGAAAGAAACCCGGATTTGTGAGGTGCGGCC TGCCGCCTTGTGAAAGAAACCCGGTTTTGTGAGGTGCGGCC < 41bp 0.827011252656575 0.54955175797778 0.7984889 0.40974346 prediction 0.554918989357591 Functional Loss - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048256 chr1:86048260 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_58403 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:86048251-86048279
64251 chr1 24113792 24113792 1 + A C OV 24113788 + 24113768 24113808 41 CGCCGACACGAGGTGACCATCTGCAATTACGAAGCATCTGC CGCCGACACGAGGTGACCATCTGCCATTACGAAGCATCTGC < 41bp 0.912341061867778 0.634905240214479 0.2665973 0.056128412 prediction 0.554871643306597 Functional Loss - PITHD1 ENSG00000057757 CDS Human protein_coding chr1:24113788 chr1:24113792 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_58407 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24113772-24113823
64251 chr1 2328573 2328573 1 + G T GBM 2328570 + 2328550 2328590 41 TCTAGATTTATCAGTCCTGGCTAGACAAGTCCACACCCTAC TCTAGATTTATCAGTCCTGGCTATACAAGTCCACACCCTAC < 41bp 0.777425131923417 0.393157991017719 0.09280959 0.19117144 prediction 0.554850263846835 Functional Loss - RER1 ENSG00000157916 CDS Human protein_coding chr1:2328570 chr1:2328573 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58408 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:2328543-2328578
64251 chr10 94452135 94452135 1 + A C BRCA 94452131 + 94452111 94452151 41 CTTCCCGCTCGCAGGCAAACCTCTACTCTGGAGCCCCTTCT CTTCCCGCTCGCAGGCAAACCTCTCCTCTGGAGCCCCTTCT < 41bp 0.777395875790261 0.355522607528817 0.89830863 0.28777808 prediction 0.554791751580523 Functional Loss - HHEX ENSG00000152804 CDS Human protein_coding chr10:94452131 chr10:94452135 synonymous SNV . 0 25 hm5C_associated_SNPs_58412 0 0 15 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:94452131-94452158
64251 chr3 25835776 25835776 1 + G T LUAD 25835774 + 25835754 25835794 41 AGGACATCTGCTGGGAGCTGCAGGGGCAGTCGAGGCAGCTT AGGACATCTGCTGGGAGCTGCATGGGCAGTCGAGGCAGCTT < 41bp 0.777392881566746 0.452066069165287 0.90225625 0.252882 prediction 0.554785763133491 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25835774 chr3:25835776 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_58413 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:25835756-25835782
64251 chr19 14065218 14065218 1 + A T CESC 14065214 + 14065194 14065234 41 CCCCGGGTGTGCGTGTCCCTCAAGAACATTGTGGATGAGGA CCCCGGGTGTGCGTGTCCCTCAAGTACATTGTGGATGAGGA < 41bp 0.84238691193146 0.565039872057125 0.6705514 0.48416957 prediction 0.554694079748669 Functional Loss - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14065214 chr19:14065218 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_58421 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:14065217-14065245
64251 chr10 7773905 7773905 1 + A T SKCM 7773901 + 7773881 7773921 41 AGGCTCAGAGATTGTGGTGGCAGGAAAATTTGACCCTGCTA AGGCTCAGAGATTGTGGTGGCAGGTAAATTTGACCCTGCTA < 41bp 0.777318845230847 0.473796531377276 0.54970056 0.73787147 prediction 0.554637690461693 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7773901 chr10:7773905 synonymous SNV . 0 25 hm5C_associated_SNPs_58424 0 0 4 GRWD1 POSTAR2 ENCODE chr10:7773877-7773909
64251 chr10 60562907 60562907 1 + C T SKCM 60562905 + 60562885 60562925 41 CCCTTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTG CCCTTTGGCTGACAAGAAGGCTTCAGGGAGTGAGCGCGCTG < 41bp 0.777236921800451 0.484047030858898 0.5229199 0.08929011 prediction 0.554473843600902 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60562905 chr10:60562907 nonsynonymous SNV 0.965 4 23 hm5C_associated_SNPs_58433 0 0 7 HNRNPD POSTAR2 GSE52971,GSM1279664 chr10:60562880-60562920
64251 chr19 1421160 1421160 1 + G T UCEC 1421158 + 1421138 1421178 41 CTTCAACAGCAGAAAGGACCCAGGAGCGATAACAGTAAATC CTTCAACAGCAGAAAGGACCCATGAGCGATAACAGTAAATC < 41bp 0.860474026786613 0.583259954570221 0.6083866 0.09818494 prediction 0.554428144432785 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1421158 chr19:1421160 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_58436 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:1421140-1421160
64251 chr1 193091432 193091432 1 + G T UCEC 193091429 + 193091409 193091449 41 TTCGGGGAGTTCTCCTGGCCCAAGAATGTGAAGACCAACTA TTCGGGGAGTTCTCCTGGCCCAATAATGTGAAGACCAACTA < 41bp 0.874084982063424 0.596872502629105 0.2662046 0.536264 prediction 0.554424958868638 Functional Loss - CDC73 ENSG00000134371 CDS Human protein_coding chr1:193091429 chr1:193091432 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58437 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:193091405-193091432
64251 chr3 15475961 15475961 1 + C T BLCA 15475959 + 15475939 15475979 41 ACCACCTATGCCATTCAGAGCTCCAACGAAGCCTCCAGTTG ACCACCTATGCCATTCAGAGCTTCAACGAAGCCTCCAGTTG < 41bp 0.777202585784983 0.49483108471388 0.4233127 0.03434229 prediction 0.554405171569965 Functional Loss - EAF1 ENSG00000144597 CDS Human protein_coding chr3:15475959 chr3:15475961 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_58438 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:15475948-15475976
64251 chr3 10291169 10291169 1 + G T LUSC 10291166 + 10291146 10291186 41 TTCTTGGGCCCTGGTGTGGGCGGGGCCGCCTCCAAAGGCTG TTCTTGGGCCCTGGTGTGGGCGGTGCCGCCTCCAAAGGCTG < 41bp 0.777190429579332 0.373496742589649 0.9480159 0.80105424 prediction 0.554380859158663 Functional Loss - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10291166 chr3:10291169 synonymous SNV . 0 24 hm5C_associated_SNPs_58442 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10291145-10291174
64251 chr7 23221774 23221774 1 + G C STAD 23221773 + 23221753 23221793 41 CGGTGCTGGAACGAACATCCCGGTGCTAGGGGTGCAGGAGG CGGTGCTGGAACGAACATCCCCGTGCTAGGGGTGCAGGAGG < 41bp 0.810753590040101 0.533566628561121 0.78800267 0.31664824 prediction 0.554373922957961 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221773 chr7:23221774 nonsynonymous SNV 0.441 0 22 hm5C_associated_SNPs_58443 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:23221746-23221777
64251 chr19 10904445 10904445 1 + G T LGG 10904443 + 10904423 10904463 41 TGAGAAGAGGATCGAGGGCTCAGGAGATCAGGTGGACACTC TGAGAAGAGGATCGAGGGCTCATGAGATCAGGTGGACACTC < 41bp 0.839242282899412 0.562058652486686 0.92817557 0.8865572 prediction 0.554367260825453 Functional Loss - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10904443 chr19:10904445 stopgain 0.992 1 23 hm5C_associated_SNPs_58445 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:10904419-10904457
64251 chr6 36654231 36654231 1 + G C rs184742749 36654227 + 36654207 36654247 41 AGGCAGGGGGAAGGTGGGGTCCTGGAGCAGACCACCCCGCC AGGCAGGGGGAAGGTGGGGTCCTGCAGCAGACCACCCCGCC < 41bp 0.777180033779049 0.49258390376306 0.815541 0.593598 prediction 0.554360067558097 Functional Loss - CDKN1A ENSG00000124762 UTR3 Human protein_coding chr6:36654227 chr6:36654231 . . 0 25 hm5C_associated_SNPs_58446 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:36654205-36654233
64251 chr1 46736385 46736385 1 + A T LUAD 46736381 + 46736361 46736401 41 AATTGCCAATTTTGAAGGGTCGAGACGCTGCTGCTAGTGAG AATTGCCAATTTTGAAGGGTCGAGTCGCTGCTGCTAGTGAG < 41bp 0.777177219759698 0.465749191317474 0.43817958 0.15079084 prediction 0.554354439519395 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46736381 chr1:46736385 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_58447 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46736313-46736407
64251 chr12 14613956 14613956 1 + G T LUAD 14613954 + 14613934 14613974 41 TTTACCCACAGTGGGCCCATCAGGACTCTATAGTCCATCAA TTTACCCACAGTGGGCCCATCATGACTCTATAGTCCATCAA < 41bp 0.777166843800122 0.457140598496325 0.21701834 0.031884223 prediction 0.554333687600244 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14613954 chr12:14613956 stopgain 1.000 1 23 hm5C_associated_SNPs_58450 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14613914-14613986
64251 chr1 1223365 1223365 1 + G T LIHC 1223363 + 1223343 1223383 41 CCCTACGGCCACTGCACCGCCGGCGGGGAAGGCGTGGAGGT CCCTACGGCCACTGCACCGCCGTCGGGGAAGGCGTGGAGGT < 41bp 0.77715313719115 0.441287809615548 0.75754786 0.5840434 prediction 0.5543062743823 Functional Loss - SCNN1D ENSG00000162572 CDS Human protein_coding chr1:1223363 chr1:1223365 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_58453 0 0 1 PPIG POSTAR2 ENCODE chr1:1223321-1223383
64251 chr20 18296758 18296758 1 + G T UCS 18296756 + 18296736 18296776 41 TGTGTGGGCACAGCTTCAGCCAGAATTCAACCCTCATCTCT TGTGTGGGCACAGCTTCAGCCATAATTCAACCCTCATCTCT < 41bp 0.777149270098038 0.448502633248547 0.52982605 0.23853719 prediction 0.554298540196076 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296756 chr20:18296758 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58454 0 0 3 EWSR1 POSTAR2 SRX029343 chr20:18296758-18296780
64251 chr18 10549030 10549030 1 + G T UCEC 10549028 + 10549008 10549048 41 AGCTTCTTGAAGGTTATGACCAGCAAGACCAAGATCAGGTG AGCTTCTTGAAGGTTATGACCATCAAGACCAAGATCAGGTG < 41bp 0.847008056722117 0.569859196793866 0.16376638 0.054290414 prediction 0.554297719856503 Functional Loss - NAPG ENSG00000134265 CDS Human protein_coding chr18:10549028 chr18:10549030 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_58455 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr18:10549024-10549054
64251 chr17 48557111 48557111 1 + G T SARC 48557109 + 48557089 48557129 41 GCTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGGTGGGT GCTCAGACGCTGCTGCGGCTCATCGGGGTGCAACGGTGGGT < 41bp 0.868804938695288 0.591674546447146 0.7608798 0.44141614 prediction 0.554260784496284 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557109 chr17:48557111 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_58459 0 0 2 DDX3X POSTAR2 ENCODE chr17:48557088-48557126
64251 chr14 100793541 100793541 1 + G T SKCM 100793539 + 100793519 100793559 41 TGCTAGGTGTGGGGCTTCTACCGGGGCCTCTCGCTGCCCGT TGCTAGGTGTGGGGCTTCTACCTGGGCCTCTCGCTGCCCGT < 41bp 0.851304203462517 0.574192381519375 0.9503819 0.8921857 prediction 0.554223643886283 Functional Loss - SLC25A47 ENSG00000140107 CDS Human protein_coding chr14:100793539 chr14:100793541 nonsynonymous SNV 0.853 3 23 hm5C_associated_SNPs_58461 0 0 1 EFTUD2 POSTAR2 ENCODE chr14:100793473-100793543
64251 chr16 30976618 30976618 1 + A T LUSC 30976614 + 30976594 30976634 41 GAGGAGGAGGAAGAGAACAGCAGCATGGTCCTTGGGGCCAG GAGGAGGAGGAAGAGAACAGCAGCTTGGTCCTTGGGGCCAG < 41bp 0.777066488784459 0.463599764846931 0.3438756 0.37748632 prediction 0.554132977568918 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976614 chr16:30976618 nonsynonymous SNV 0.044 1 25 hm5C_associated_SNPs_58464 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30976608-30976634
64251 chr17 41166312 41166312 1 + G T LIHC 41166309 + 41166289 41166329 41 AGCAGTCTTCACCTCTGAGTCAGGCTAGGGGCCTCCCCTTC AGCAGTCTTCACCTCTGAGTCAGTCTAGGGGCCTCCCCTTC < 41bp 0.903491239434243 0.626452695987088 0.7755531 0.09303847 prediction 0.554077086894311 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41166309 chr17:41166312 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_58470 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41166268-41166329
64251 chr19 37966894 37966894 1 + A T LUSC 37966890 + 37966870 37966910 41 AATGTGATGCTAGAGAACTACAGGATCTTGGTATCACTGGG AATGTGATGCTAGAGAACTACAGGTTCTTGGTATCACTGGG < 41bp 0.820499070839468 0.54346543643647 0.3382514 0.27913558 prediction 0.554067268805994 Functional Loss - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37966890 chr19:37966894 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_58472 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37966849-37966897
64251 chr17 36909499 36909499 1 + A T rs4907 36909495 + 36909475 36909515 41 AGGCGCTTCGGGATCCAGGCCCAGATGGTGACCACGGACTT AGGCGCTTCGGGATCCAGGCCCAGTTGGTGACCACGGACTT < 41bp 0.77702498298886 0.455759321103 0.35050032 0.31807604 prediction 0.55404996597772 Functional Loss - PSMB3 ENSG00000108294 CDS Human other chr17:36909495 chr17:36909499 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_58474 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:36909458-36909523
64251 chr15 40657052 40657052 1 + G C HNSC 40657051 + 40657031 40657071 41 CCCTGCAGGGCTTTGAGCCACGGGACACAGACATTGGGAGC CCCTGCAGGGCTTTGAGCCACCGGACACAGACATTGGGAGC < 41bp 0.835682526537653 0.558658249610428 0.5729311 0.29720098 prediction 0.55404855385445 Functional Loss - DISP2 ENSG00000140323 CDS Human protein_coding chr15:40657051 chr15:40657052 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_58475 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr15:40657040-40657060
64251 chr1 22417994 22417994 1 + G T CESC 22417992 + 22417972 22418012 41 CCAGAACCGAAGAAGAGCCGCAGGTGTGTGCTGCTATGAAC CCAGAACCGAAGAAGAGCCGCATGTGTGTGCTGCTATGAAC < 41bp 0.777007659424592 0.458440259080926 0.9269049 0.7915389 prediction 0.554015318849185 Functional Loss - CDC42 ENSG00000070831 CDS Human protein_coding chr1:22417992 chr1:22417994 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58477 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:22417952-22418005
64251 chr1 155288031 155288031 1 + C T DLBC 155288029 + 155288009 155288049 41 GTATCTACCGCCTGCTGAAGCTCTATTGCCGGGAGCAGCCC GTATCTACCGCCTGCTGAAGCTTTATTGCCGGGAGCAGCCC < 41bp 0.782708736772665 0.505732243313388 0.37069649 0.051750034 prediction 0.553952986918555 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155288029 chr1:155288031 synonymous SNV . 0 23 hm5C_associated_SNPs_58484 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr1:155287987-155288040
64251 chr9 95381800 95381800 1 - C A UCEC 95381803 - 95381783 95381823 41 ACTGCCAAGGACTGCTCCATCATGATTGCACTGTCTCCCTG ACTGCCAAGGACTGCTCCATCATTATTGCACTGTCTCCCTG < 41bp 0.904067358346798 0.627131950394907 0.36811298 0.06961173 prediction 0.553870815903782 Functional Loss - IPPK ENSG00000127080 CDS Human protein_coding chr9:95381803 chr9:95381800 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_58490 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:95381779-95381817
64251 chr17 2280078 2280078 1 + G T ACC 2280076 + 2280056 2280096 41 ATGTGCAGGGCATGTGCGATCTGCTGGCGCCTCTCCTGGTC ATGTGCAGGGCATGTGCGATCTTCTGGCGCCTCTCCTGGTC < 41bp 0.776928488505729 0.440204182634475 0.21512142 0.20372313 prediction 0.553856977011459 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2280076 chr17:2280078 synonymous SNV . 0 23 hm5C_associated_SNPs_58493 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2280050-2280088
64251 chrX 108785900 108785900 1 + G T UCEC 108785897 + 108785877 108785917 41 CAAGTGATTGCTTCCGTTTTCAAGATTGGTCTAGTAGTTAA CAAGTGATTGCTTCCGTTTTCAATATTGGTCTAGTAGTTAA < 41bp 0.882570174642703 0.605643236133494 0.4095762 0.19223666 prediction 0.553853877018418 Functional Loss - NXT2 ENSG00000101888 CDS Human protein_coding chrX:108785897 chrX:108785900 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58494 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:108785855-108785900
64251 chr12 57963926 57963926 1 + A T SKCM 57963922 + 57963902 57963942 41 ACGAGGAGGAGATCCGCCGTCTCTATAAGCAGCTTGACGAC ACGAGGAGGAGATCCGCCGTCTCTTTAAGCAGCTTGACGAC < 41bp 0.776899101739961 0.430950546870542 0.9248642 0.32823783 prediction 0.553798203479922 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57963922 chr12:57963926 nonsynonymous SNV 0.981 3 25 hm5C_associated_SNPs_58499 0 0 1 ZNF622 POSTAR2 ENCODE chr12:57963825-57963935
64251 chr2 113404703 113404703 1 + G T GBM 113404700 + 113404680 113404720 41 TGGAGATGTACAACTCGACTCAAGGGCTGCTGATGGCCGGC TGGAGATGTACAACTCGACTCAATGGCTGCTGATGGCCGGC < 41bp 0.77689596707879 0.383742953336884 0.47165325 0.05256632 prediction 0.553791934157579 Functional Loss - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113404700 chr2:113404703 nonsynonymous SNV 0.007 2 24 hm5C_associated_SNPs_58500 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:113404645-113404707
64251 chr11 125525243 125525243 1 + G T LUAD 125525240 + 125525220 125525260 41 ACCATCGGCTCTGGGGAATCCTGGTGAATATAGTGCTGCTA ACCATCGGCTCTGGGGAATCCTGTTGAATATAGTGCTGCTA < 41bp 0.776886252221122 0.410644573558428 0.44042864 0.21291283 prediction 0.553772504442244 Functional Loss - CHEK1 ENSG00000149554 splicing Human protein_coding chr11:125525240 chr11:125525243 . . 0 24 hm5C_associated_SNPs_58503 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:125525211-125525248
64251 chr1 243579084 243579084 1 + A T UCEC 243579080 + 243579060 243579100 41 TTCAGGCCCAGCAAAGAGAGCAGGAGCTGACACAGAAGATA TTCAGGCCCAGCAAAGAGAGCAGGTGCTGACACAGAAGATA < 41bp 0.823658228682794 0.546773324726232 0.6003484 0.7750958 prediction 0.553769807913123 Functional Loss - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243579080 chr1:243579084 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_58504 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr1:243579063-243579084
64251 chr19 36145572 36145572 1 + G T LUSC 36145570 + 36145550 36145590 41 CAGTCCCTCTGCCCCACATCCTGGGTATGTGCCTCCTGCCA CAGTCCCTCTGCCCCACATCCTTGGTATGTGCCTCCTGCCA < 41bp 0.86438828298278 0.587504360544602 0.82247055 0.13577944 prediction 0.553767844876354 Functional Loss - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36145570 chr19:36145572 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_58505 0 0 14 DDX6 POSTAR2 ENCODE chr19:36145537-36145572
64251 chr9 131277857 131277857 1 + G T LIHC 131277854 + 131277834 131277874 41 ATCTATGGTACTTCAGTCCTCACGGGGGATCAAAGTGGAAG ATCTATGGTACTTCAGTCCTCACTGGGGATCAAAGTGGAAG < 41bp 0.776872925686633 0.38885533473707 0.31494176 0.068252206 prediction 0.553745851373267 Functional Loss - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131277854 chr9:131277857 nonsynonymous SNV 0.931 2 24 hm5C_associated_SNPs_58507 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr9:131277832-131277868
64251 chr17 66036862 66036862 1 + C T SKCM 66036860 + 66036840 66036880 41 GCAGCAATGTGGAAAATCAGCTCCAAGCTACTCAAGCTGCC GCAGCAATGTGGAAAATCAGCTTCAAGCTACTCAAGCTGCC < 41bp 0.787777262763676 0.510918585599565 0.31932113 0.029382229 prediction 0.553717354328223 Functional Loss - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66036860 chr17:66036862 synonymous SNV . 0 23 hm5C_associated_SNPs_58509 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:66036798-66036882
64251 chrX 103432767 103432767 1 + G T UCEC 103432764 + 103432744 103432784 41 TAGCCCTCGCCAACGGCCTGCAAGAGAGGCCTGGAAGAGAA TAGCCCTCGCCAACGGCCTGCAATAGAGGCCTGGAAGAGAA < 41bp 0.776844916582785 0.407573766518052 0.5310349 0.22917253 prediction 0.553689833165571 Functional Loss - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103432764 chrX:103432767 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_58512 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chrX:103432742-103432780
64251 chr9 132640669 132640669 1 + G T UCEC 132640667 + 132640647 132640687 41 CCGGGCGTCATCTACTGCATCAGCATGCAGTGGTTCCGGGA CCGGGCGTCATCTACTGCATCATCATGCAGTGGTTCCGGGA < 41bp 0.776836810421928 0.44380110225214 0.1480731 0.08470622 prediction 0.553673620843856 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132640667 chr9:132640669 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58514 0 0 1 TNRC6A POSTAR2 ENCODE chr9:132640630-132640709
64251 chr16 675940 675940 1 + G T SKCM 675938 + 675918 675958 41 GGATCTTGGTTGGAAACCGGCTGCACCTGGCCTTCAAGCGG GGATCTTGGTTGGAAACCGGCTTCACCTGGCCTTCAAGCGG < 41bp 0.776836068321003 0.446064128435228 0.14611572 0.11106965 prediction 0.553672136642006 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:675938 chr16:675940 synonymous SNV . 0 23 hm5C_associated_SNPs_58516 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334288 chr16:675923-675940
64251 chr11 47377022 47377022 1 - C A HNSC 47377024 - 47377004 47377044 41 GGCGACATGAAGGACAGCATCTGGTGGGTGGACAAGGACAA GGCGACATGAAGGACAGCATCTTGTGGGTGGACAAGGACAA < 41bp 0.776831684313154 0.457200816712831 0.2453635 0.10944399 prediction 0.553663368626307 Functional Loss - SPI1 ENSG00000066336 CDS Human protein_coding chr11:47377024 chr11:47377022 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58517 0 0 1 UCHL5 POSTAR2 ENCODE chr11:47376861-47377035
64251 chr19 52877655 52877655 1 + G T LUSC 52877652 + 52877632 52877672 41 ATAGCAAACAATCCAGGTGGCAGGGAGTGCATCAAAGGTGT ATAGCAAACAATCCAGGTGGCAGTGAGTGCATCAAAGGTGT < 41bp 0.899505943408639 0.622687742068821 0.81084776 0.19516072 prediction 0.553636402679636 Functional Loss - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52877652 chr19:52877655 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_58519 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52877635-52877668
64251 chr2 204255850 204255850 1 + G T ESCA 204255848 + 204255828 204255868 41 GCCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTTGGGT GCCCCCTAGTCCCCCTATGTCATGGAAAGGGACACTTGGGT < 41bp 0.776791798592553 0.44705219600171 0.9337112 0.3526222 prediction 0.553583597185105 Functional Loss - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204255848 chr2:204255850 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_58522 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr2:204255848-204255886
64251 chr16 3573224 3573224 1 + G T UCEC 3573222 + 3573202 3573242 41 AAAAGCAGTATGACACTTATCTGGAGAAATTTCAAAATCTG AAAAGCAGTATGACACTTATCTTGAGAAATTTCAAAATCTG < 41bp 0.776773239348977 0.463365006126194 0.32397243 0.10897717 prediction 0.553546478697954 Functional Loss - CLUAP1 ENSG00000103351 CDS Human protein_coding chr16:3573222 chr16:3573224 synonymous SNV . 0 23 hm5C_associated_SNPs_58529 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr16:3573209-3573239
64251 chr2 71360180 71360180 1 + A C UCEC 71360176 + 71360156 71360196 41 ATGAGCAGATTTGGCAACAACTGGAATTGCAAAATGAACCA ATGAGCAGATTTGGCAACAACTGGCATTGCAAAATGAACCA < 41bp 0.909845852899834 0.633073224878067 0.33245176 0.17152846 prediction 0.553545256043535 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71360176 chr2:71360180 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_58530 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:71360131-71360186
64251 chr19 45543500 45543500 1 + G T CESC 45543498 + 45543478 45543518 41 ACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATG ACGAGGCTCGGAAGCATGAGCGTAAGCTTCGAGGCATGATG < 41bp 0.77676869929567 0.439191649150563 0.82140934 0.2852468 prediction 0.553537398591341 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45543498 chr19:45543500 synonymous SNV . 0 23 hm5C_associated_SNPs_58531 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr19:45543488-45543513
64251 chr2 24991224 24991224 1 + G T UCEC 24991222 + 24991202 24991242 41 GACCACAGACCCCCCAGGCCCAGCAGAAGAGCCTCCTTCAG GACCACAGACCCCCCAGGCCCATCAGAAGAGCCTCCTTCAG < 41bp 0.828220718871252 0.551461384624239 0.8118325 0.1640918 prediction 0.553518668494027 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24991222 chr2:24991224 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58535 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:24991216-24991255
64251 chr1 163044408 163044408 1 + G C COAD 163044404 + 163044384 163044424 41 GACTCTATGCTCTGGAAAACCTGAGGCCAAATATTGATCTG GACTCTATGCTCTGGAAAACCTGACGCCAAATATTGATCTG < 41bp 0.797258648146845 0.520515249832389 0.7590233 0.29654616 prediction 0.553486796628913 Functional Loss - RGS4 ENSG00000117152 splicing Human protein_coding chr1:163044404 chr1:163044408 . 1.000 0 25 hm5C_associated_SNPs_58540 0 0 1 MBNL2 POSTAR2 GSE68890,GSM1685419 chr1:163044400-163044440
64251 chr22 42262934 42262934 1 + G T UCEC 42262932 + 42262912 42262952 41 GGCAGTGGTGGTAGTGGTAGCAGCAGCGGCAGCAGTGGCAG GGCAGTGGTGGTAGTGGTAGCATCAGCGGCAGCAGTGGCAG < 41bp 0.867433844338938 0.590697708837467 0.8730168 0.7229438 prediction 0.553472271002943 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42262932 chr22:42262934 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_58542 0 0 6 IGF2BP1 POSTAR2 ENCODE chr22:42262913-42262969
64251 chr16 23691520 23691520 1 + G C BLCA 23691519 + 23691499 23691539 41 ACCGAAACCGAGTTATTCATCGAGACCTCAAGCTGGGCAAC ACCGAAACCGAGTTATTCATCCAGACCTCAAGCTGGGCAAC < 41bp 0.830774540139154 0.554044163870627 0.8260057 0.2367478 prediction 0.553460752537055 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23691519 chr16:23691520 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_58543 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:23691474-23691524
64251 chr2 74684871 74684871 1 + G C HNSC 74684870 + 74684850 74684890 41 TGTCCCCGGCTGTCCCCATCCGCGCCGCTACGCTTGCTCCC TGTCCCCGGCTGTCCCCATCCCCGCCGCTACGCTTGCTCCC < 41bp 0.776728970683109 0.472647648788258 0.7246116 0.22003499 prediction 0.553457941366218 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74684870 chr2:74684871 synonymous SNV . 0 22 hm5C_associated_SNPs_58544 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74684844-74684875
64251 chr12 67699015 67699015 1 + C T UCEC 67699013 + 67698993 67699033 41 TCACGTTCAGGCTTTGGTTCCTCCAGTGGTGGCTTGTGTTG TCACGTTCAGGCTTTGGTTCCTTCAGTGGTGGCTTGTGTTG < 41bp 0.804174868450575 0.527453506484404 0.957885 0.056113303 prediction 0.553442723932342 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699013 chr12:67699015 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58545 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr12:67698934-67699024
64251 chr2 46803290 46803290 1 + C T UCEC 46803288 + 46803268 46803308 41 GATGTCTTCCTTATATGCTTCTCGGTGGTAAATCCAGCCTC GATGTCTTCCTTATATGCTTCTTGGTGGTAAATCCAGCCTC < 41bp 0.781227858802201 0.504513562463899 0.43542373 0.3953636 prediction 0.553428592676604 Functional Loss - RHOQ ENSG00000119729 CDS Human protein_coding chr2:46803288 chr2:46803290 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_58549 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:46803268-46803294
64251 chr8 48874738 48874738 1 + G T rs569961103 48874736 + 48874716 48874756 41 ACAGAGGCCTGACCTGGGCTCTGCACAGAAGGGCCTGCAAG ACAGAGGCCTGACCTGGGCTCTTCACAGAAGGGCCTGCAAG < 41bp 0.776712526510401 0.444054370914249 0.10570389 0.3256964 prediction 0.553425053020803 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48874736 chr8:48874738 nonsynonymous SNV 0.772 1 23 hm5C_associated_SNPs_58550 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr8:48874703-48874764
64251 chr15 85681082 85681082 1 + G T LIHC 85681080 + 85681060 85681100 41 CTTGACAACAACTTTAAATACTGGAAAGGACTGGACGAAAT CTTGACAACAACTTTAAATACTTGAAAGGACTGGACGAAAT < 41bp 0.787138540887806 0.510482113755257 0.36863008 0.32218403 prediction 0.553312854265097 Functional Loss - PDE8A ENSG00000073417 CDS Human protein_coding chr15:85681080 chr15:85681082 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58561 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr15:85681063-85681092
64251 chr11 10327535 10327535 1 + G T LUAD 10327533 + 10327513 10327553 41 TGAGTCGTGGGAAGAGGGAACTGCGGATGTCCAGCAGCTAC TGAGTCGTGGGAAGAGGGAACTTCGGATGTCCAGCAGCTAC < 41bp 0.776631546048718 0.437621517852668 0.8079833 0.78178716 prediction 0.553263092097436 Functional Loss - ADM ENSG00000148926 CDS Human protein_coding chr11:10327533 chr11:10327535 synonymous SNV . 0 23 hm5C_associated_SNPs_58563 0 0 1 PPIG POSTAR2 ENCODE chr11:10327510-10327586
64251 chr11 12245040 12245040 1 + C T SKCM 12245038 + 12245018 12245058 41 GTGAGGAGATCTGTCAACCTCTCCAGGAAGGGTAAGCGGCC GTGAGGAGATCTGTCAACCTCTTCAGGAAGGGTAAGCGGCC < 41bp 0.776620238138408 0.495383385532376 0.94750965 0.084721744 prediction 0.553240476276815 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12245038 chr11:12245040 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_58564 0 0 1 SUB1 POSTAR2 ENCODE chr11:12245034-12245048
64251 chr19 1220400 1220400 1 + G T LUAD 1220397 + 1220377 1220417 41 TCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAG TCTGTCAGCTGATTGACGGCCTGTAGTACCTGCATAGCCAG < 41bp 0.900478806162789 0.62387637430033 0.7721895 0.34959742 prediction 0.553204863724916 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220397 chr19:1220400 stopgain 0.996 1 24 hm5C_associated_SNPs_58568 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1220378-1220411
64251 chr6 133138645 133138645 1 + G T LAML 133138642 + 133138622 133138662 41 TATGGCAAGGAGTCTCAGGCCAAGGATGTCATTGAAGAGTA TATGGCAAGGAGTCTCAGGCCAATGATGTCATTGAAGAGTA < 41bp 0.776592736791077 0.408993129029254 0.21998838 0.14650014 prediction 0.553185473582154 Functional Loss - RPS12 ENSG00000112306 CDS Human protein_coding chr6:133138642 chr6:133138645 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_58570 0 0 34 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:133138596-133138665
64251 chr12 57850626 57850626 1 + A T LGG 57850622 + 57850602 57850642 41 ATGGTGGTGGAGGCCTGTGGCTGCAGCTAGCAAGAGGACCT ATGGTGGTGGAGGCCTGTGGCTGCTGCTAGCAAGAGGACCT < 41bp 0.844141163909042 0.567558747849333 0.50100464 0.0994685 prediction 0.553164832119418 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850622 chr12:57850626 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_58572 0 0 2 RBM15 POSTAR2 ENCODE chr12:57850594-57850642
64251 chr2 127451461 127451461 1 + G T STAD 127451458 + 127451438 127451478 41 AGAGCCTGATCCAGGGATGTCTGGATGGCCGGATGGCAGAA AGAGCCTGATCCAGGGATGTCTGTATGGCCGGATGGCAGAA < 41bp 0.898158652570122 0.621582125162452 0.5478065 0.2548197 prediction 0.55315305481534 Functional Loss - GYPC ENSG00000136732 CDS Human protein_coding chr2:127451458 chr2:127451461 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_58573 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:127451453-127451502
64251 chr16 81348827 81348827 1 + G C CESC 81348826 + 81348806 81348846 41 TGCGACGCGCACCTGGTCCTCGACGGGGAGGAGATCCCGGT TGCGACGCGCACCTGGTCCTCCACGGGGAGGAGATCCCGGT < 41bp 0.8200864320173 0.54352024227048 0.84416986 0.847889 prediction 0.55313237949364 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81348826 chr16:81348827 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_58574 0 0 2 GEMIN5 POSTAR2 ENCODE chr16:81348823-81348904
64251 chr2 103380807 103380807 1 + G T UCEC 103380804 + 103380784 103380824 41 CTAGCCAATCAGCCACCGTCCAAGAACTGCACACATGCTTA CTAGCCAATCAGCCACCGTCCAATAACTGCACACATGCTTA < 41bp 0.77653598305712 0.391791363505962 0.32911772 0.16377574 prediction 0.55307196611424 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103380804 chr2:103380807 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58575 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:103380790-103380823
64251 chr1 210012319 210012319 1 + C T rs114160793 210012317 + 210012297 210012337 41 TGCAGCTCTTCATCAGCCTCCTCGAGGGTGACAGCAAGAAG TGCAGCTCTTCATCAGCCTCCTTGAGGGTGACAGCAAGAAG < 41bp 0.785982018104259 0.509448883748325 0.10979831 0.10077241 prediction 0.553066268711868 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012317 chr1:210012319 synonymous SNV . 0 23 hm5C_associated_SNPs_58576 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210012301-210012330
64251 chr2 176983704 176983704 1 + A C rs61740491 176983700 + 176983680 176983720 41 AGAGGAAATCAAGTCTGATACACCAACCAGCAATTGGCTCA AGAGGAAATCAAGTCTGATACACCCACCAGCAATTGGCTCA < 41bp 0.776505931187205 0.375233639677474 0.033984333 0.017760694 prediction 0.55301186237441 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983700 chr2:176983704 synonymous SNV . 0 25 hm5C_associated_SNPs_58580 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:176983636-176983795
64251 chr21 35304004 35304004 1 + A T rs560388366 35304000 + 35303980 35304020 41 TGGGAAATGGTTATTGTCAACGCCAGCCCCATTTTGGAGGC TGGGAAATGGTTATTGTCAACGCCTGCCCCATTTTGGAGGC < 41bp 0.782122929112553 0.505619008431329 0.3923377 0.18921083 prediction 0.553007841362448 Functional Loss - LINC00649 ENSG00000237945 ncRNA_exonic Human antisense chr21:35304000 chr21:35304004 . . 0 25 hm5C_associated_SNPs_58581 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr21:35304001-35304025
64251 chr18 3277822 3277822 1 + G T KIRC 3277820 + 3277800 3277840 41 AACCATGGGGGATCGGTTTACAGATGAGGAAGTGGATGAGC AACCATGGGGGATCGGTTTACATATGAGGAAGTGGATGAGC < 41bp 0.776501491154389 0.456191970208687 0.8274058 0.32708755 prediction 0.553002982308779 Functional Loss - MYL12B ENSG00000118680 CDS Human protein_coding chr18:3277820 chr18:3277822 nonsynonymous SNV 0.815 3 23 hm5C_associated_SNPs_58582 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr18:3277784-3277845
64251 chr19 39963967 39963967 1 + G T LUSC 39963964 + 39963944 39963984 41 ACGGCTCACAGACACCCCTCCAGGATGGTGAGTGCCCGCAG ACGGCTCACAGACACCCCTCCAGTATGGTGAGTGCCCGCAG < 41bp 0.895065826367699 0.6185720913481 0.45173147 0.052779198 prediction 0.5529874700392 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963964 chr19:39963967 nonsynonymous SNV 0.977 3 24 hm5C_associated_SNPs_58584 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39963915-39963969
64251 chr1 182852725 182852725 1 + C T LGG 182852723 + 182852703 182852743 41 CTGCAGTTGCTTCTCTTTGCCTCCAAGAAAGTCCAATCTGA CTGCAGTTGCTTCTCTTTGCCTTCAAGAAAGTCCAATCTGA < 41bp 0.776479513088542 0.476965642990091 0.96040523 0.0947386 prediction 0.552959026177084 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182852723 chr1:182852725 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58585 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:182852687-182852745
64251 chr9 131644456 131644456 1 + G C rs530650111 131644455 + 131644435 131644475 41 AAAAGGAGGCGCCGGAGCAGCGCTGCGGCCGGCGGCGGGAC AAAAGGAGGCGCCGGAGCAGCCCTGCGGCCGGCGGCGGGAC < 41bp 0.776450689859465 0.486133273700766 0.410566 0.25702637 prediction 0.552901379718931 Functional Loss - LRRC8A ENSG00000136802 UTR5 Human protein_coding chr9:131644455 chr9:131644456 . . 0 22 hm5C_associated_SNPs_58587 0 0 3 DDX3X POSTAR2 ENCODE chr9:131644441-131644532
64251 chr8 28573738 28573738 1 + G T HNSC 28573736 + 28573716 28573756 41 CCCACTATTACCTCACCACTCTGGATGAGGCTGATGAGGCA CCCACTATTACCTCACCACTCTTGATGAGGCTGATGAGGCA < 41bp 0.845354667194799 0.568909475039993 0.27224427 0.19048321 prediction 0.552890384309613 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28573736 chr8:28573738 synonymous SNV . 0 23 hm5C_associated_SNPs_58588 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr8:28573715-28573738
64251 chr6 18200695 18200695 1 + G T GBM 18200693 + 18200673 18200713 41 ACTGTCCTGGAAGCCAAAGACAGAATTGGAGGCCGAGTCTG ACTGTCCTGGAAGCCAAAGACATAATTGGAGGCCGAGTCTG < 41bp 0.860088531316021 0.583644186950819 0.42522827 0.16463077 prediction 0.552888688730406 Functional Loss - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18200693 chr6:18200695 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_58590 0 0 1 BUD13 POSTAR2 ENCODE chr6:18200634-18200706
64251 chr11 62554931 62554931 1 + G C BLCA 62554930 + 62554910 62554950 41 CTGTCCTGGCTGCAGCGCGTCGAGCTTGCGCTCTTTGCTGC CTGTCCTGGCTGCAGCGCGTCCAGCTTGCGCTCTTTGCTGC < 41bp 0.815592238963943 0.539161178720587 0.74213225 0.13855645 prediction 0.552862120486712 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62554930 chr11:62554931 nonsynonymous SNV 0.687 2 22 hm5C_associated_SNPs_58597 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:62554914-62554944
64251 chr2 178981053 178981053 1 + G T UCEC 178981050 + 178981030 178981070 41 TGTTGAAGATGAAGAACTTACAAGAATCTTTGTTATGATAC TGTTGAAGATGAAGAACTTACAATAATCTTTGTTATGATAC < 41bp 0.889995847229612 0.61359229091091 0.24543819 0.05709642 prediction 0.552807112637404 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178981050 chr2:178981053 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_58600 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:178981053-178981075
64251 chr9 34251879 34251879 1 + G T rs145127592 34251876 + 34251856 34251896 41 GGCCTAGTTGCTGAGAGGGGCTGGGGAGATGGGGCGGGAGG GGCCTAGTTGCTGAGAGGGGCTGTGGAGATGGGGCGGGAGG < 41bp 0.895122195459398 0.61872795133095 0.8734225 0.4179843 prediction 0.552788488256896 Functional Loss - UBAP1 ENSG00000165006 UTR3 Human protein_coding chr9:34251876 chr9:34251879 . . 0 24 hm5C_associated_SNPs_58602 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:34251834-34251883
64251 chr12 27113558 27113558 1 + G T UCEC 27113556 + 27113536 27113576 41 GAAGGCACTTGGAAGCAAATCAGAATGTACACTAAATAAAC GAAGGCACTTGGAAGCAAATCATAATGTACACTAAATAAAC < 41bp 0.829502769346517 0.553108527193332 0.15475348 0.08142322 prediction 0.552788484306371 Functional Loss - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27113556 chr12:27113558 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_58603 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:27113515-27113569
64251 chr16 19126839 19126839 1 + A C KICH 19126835 + 19126815 19126855 41 GGCACTGTGGGGTGTGAACACAGCACGCCAGGAGCAGAAGC GGCACTGTGGGGTGTGAACACAGCCCGCCAGGAGCAGAAGC < 41bp 0.899227157457962 0.622838892106216 0.6235457 0.39190227 prediction 0.552776530703491 Functional Loss - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126835 chr16:19126839 synonymous SNV . 0 25 hm5C_associated_SNPs_58604 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:19126820-19126840
64251 chr16 46727496 46727496 1 + G T rs112260518 46727493 + 46727473 46727513 41 AGGCAGAGGCAGGAGGACTGCTTGAGGCAAGGAGTTCAAGA AGGCAGAGGCAGGAGGACTGCTTTAGGCAAGGAGTTCAAGA < 41bp 0.776385358613886 0.413815308701642 0.78267694 0.4549854 prediction 0.552770717227772 Functional Loss - ORC6 ENSG00000091651 intronic Human protein_coding chr16:46727493 chr16:46727496 . . 0 24 hm5C_associated_SNPs_58608 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:46727417-46727539
64251 chr8 123964946 123964946 1 + G T PRAD 123964943 + 123964923 123964963 41 CCCCATCACACTTGCCGTGGCAGGAGTCACCAACCATGGCC CCCCATCACACTTGCCGTGGCAGTAGTCACCAACCATGGCC < 41bp 0.902994762274956 0.626636831884946 0.6361307 0.22276968 prediction 0.552715860780021 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964943 chr8:123964946 nonsynonymous SNV 0.968 3 24 hm5C_associated_SNPs_58610 0 0 4 BUD13 POSTAR2 ENCODE chr8:123964921-123964954
64251 chr3 158384153 158384153 1 + G T BLCA 158384150 + 158384130 158384170 41 GAAAGCCAAAAGTTGCCTTTCGAGAGACCATTACTGCCCCT GAAAGCCAAAAGTTGCCTTTCGATAGACCATTACTGCCCCT < 41bp 0.883306279145293 0.606955654709225 0.908885 0.14852947 prediction 0.552701248872136 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158384150 chr3:158384153 stopgain 1.000 1 24 hm5C_associated_SNPs_58612 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:158384132-158384153
64251 chr6 20402625 20402625 1 + G C GBM 20402624 + 20402604 20402644 41 CGCCGCCGCTGCCGCCGCCCCGGGCGCGTACATCCAGATCC CGCCGCCGCTGCCGCCGCCCCCGGCGCGTACATCCAGATCC < 41bp 0.827918069342419 0.551570640650512 0.7917332 0.58011943 prediction 0.552694857383814 Functional Loss - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402624 chr6:20402625 synonymous SNV . 0 22 hm5C_associated_SNPs_58614 0 0 1 GEMIN5 POSTAR2 ENCODE chr6:20402612-20402654
64251 chr19 44679925 44679925 1 + G T READ 44679923 + 44679903 44679943 41 AGTTTCCTATCTTGAGAACCCAGGATTCTTGGAGGAAAACA AGTTTCCTATCTTGAGAACCCATGATTCTTGGAGGAAAACA < 41bp 0.82276411912044 0.546429857007385 0.82574415 0.15133902 prediction 0.552668524226108 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44679923 chr19:44679925 nonsynonymous SNV 0.083 0 23 hm5C_associated_SNPs_58616 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44679900-44679960
64251 chr22 35719569 35719569 1 + G T KIRC 35719567 + 35719547 35719587 41 AGGACCTGCGGAGGAAAGGCCTGGAGTTCCCCATGACTGAC AGGACCTGCGGAGGAAAGGCCTTGAGTTCCCCATGACTGAC < 41bp 0.841130895652438 0.564810307902179 0.30705622 0.11499122 prediction 0.552641175500519 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719567 chr22:35719569 synonymous SNV . 0 23 hm5C_associated_SNPs_58619 0 0 2 PPIG POSTAR2 ENCODE chr22:35719544-35719623
64251 chr1 28858745 28858745 1 + G T COAD 28858742 + 28858722 28858762 41 AGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAA AGGGACACATCAGTGGAGGGCTCTGAGATGGTCCCTGGGAA < 41bp 0.776285293391993 0.384192213137819 0.24415872 0.33056664 prediction 0.552570586783986 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28858742 chr1:28858745 synonymous SNV . 0 24 hm5C_associated_SNPs_58623 0 0 18 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:28858683-28858751
64251 chr7 2395043 2395043 1 + G C rs78680793 2395042 + 2395022 2395062 41 CCCGAGGACTTCGTGGACGACGTGAGCGAGGAAGGTGAGGG CCCGAGGACTTCGTGGACGACCTGAGCGAGGAAGGTGAGGG < 41bp 0.803932661863007 0.527649989209882 0.3552248 0.43210924 prediction 0.55256534530625 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2395042 chr7:2395043 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_58624 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2395014-2395048
64251 chr19 19613159 19613159 1 + G T THYM 19613156 + 19613136 19613176 41 GCAGGCCTCCAGCCAGCTGTCCCGGGGTTCGGCCACGACGC GCAGGCCTCCAGCCAGCTGTCCCTGGGTTCGGCCACGACGC < 41bp 0.77628018052822 0.381772791158697 0.83690214 0.14717177 prediction 0.55256036105644 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19613156 chr19:19613159 nonsynonymous SNV 0.818 2 24 hm5C_associated_SNPs_58625 0 0 2 FMR1 POSTAR2 ENCODE chr19:19613143-19613179
64251 chr13 42877063 42877063 1 + G T UCEC 42877060 + 42877040 42877080 41 AACCAAAGTGCAGTGCAACTCAAGAATGTTCCCTGTGCCAA AACCAAAGTGCAGTGCAACTCAATAATGTTCCCTGTGCCAA < 41bp 0.776246647788602 0.421259271452089 0.7855959 0.090699404 prediction 0.552493295577204 Functional Loss - AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42877060 chr13:42877063 nonsynonymous SNV 0.009 1 24 hm5C_associated_SNPs_58627 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:42877039-42877077
64251 chr22 30165745 30165745 1 + G T rs368747090 30165742 + 30165722 30165762 41 CCCATCCAGGCCAGAAGGACCAGGTCCACCCAGCAGCTGTT CCCATCCAGGCCAGAAGGACCAGTTCCACCCAGCAGCTGTT < 41bp 0.776241494326534 0.390073881154104 0.7756038 0.29155594 prediction 0.552482988653068 Functional Loss - UQCR10 ENSG00000184076 UTR3 Human protein_coding chr22:30165742 chr22:30165745 . 0.130 0 24 hm5C_associated_SNPs_58628 0 0 23 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:30165680-30165840
64251 chr12 57970117 57970117 1 + G T LAML 57970115 + 57970095 57970135 41 ACCGGCAGCTGGCCCGGCTCCGGGACGAGATCAACGAGAAG ACCGGCAGCTGGCCCGGCTCCGTGACGAGATCAACGAGAAG < 41bp 0.865250169614964 0.589032921732778 0.72083116 0.15114352 prediction 0.552434495764371 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57970115 chr12:57970117 synonymous SNV . 0 23 hm5C_associated_SNPs_58631 0 0 1 BUD13 POSTAR2 ENCODE chr12:57970078-57970119
64251 chrX 102004133 102004133 1 + G C LUAD 102004132 + 102004112 102004152 41 GAACAAGGTTGTTGCTGAGACGAAGGAAGGAGCTCTGTCAG GAACAAGGTTGTTGCTGAGACCAAGGAAGGAGCTCTGTCAG < 41bp 0.812025041851768 0.535822315686531 0.33949924 0.20279077 prediction 0.552405452330475 Functional Loss - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102004132 chrX:102004133 synonymous SNV . 0 22 hm5C_associated_SNPs_58635 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:102004078-102004147
64251 chr3 73016867 73016867 1 + G T HNSC 73016865 + 73016845 73016885 41 GAGCACTCTATGAAGCAATACGGGATGTAAGTGTGCCCTTG GAGCACTCTATGAAGCAATACGTGATGTAAGTGTGCCCTTG < 41bp 0.855532910889446 0.579340999793961 0.8583911 0.29648155 prediction 0.552383822190971 Functional Loss - GXYLT2 ENSG00000172986 CDS Human protein_coding chr3:73016865 chr3:73016867 synonymous SNV . 0 23 hm5C_associated_SNPs_58638 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:73016861-73016891
64251 chr5 145838692 145838692 1 + G T STAD 145838690 + 145838670 145838710 41 CCCAAGCCCAAGCCCAGGCCCAGGCTCAGGCTCAGGCACAA CCCAAGCCCAAGCCCAGGCCCATGCTCAGGCTCAGGCACAA < 41bp 0.869619367818184 0.59345499855448 0.2936828 0.040375143 prediction 0.552328738527408 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838690 chr5:145838692 nonsynonymous SNV 0.125 1 23 hm5C_associated_SNPs_58643 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr7 90895882 90895882 1 + G T LUSC 90895879 + 90895859 90895899 41 ACTTCTACGAGCAGGCCTTCCGGGACCAGTGGGAACGCAGC ACTTCTACGAGCAGGCCTTCCGGTACCAGTGGGAACGCAGC < 41bp 0.896518750200129 0.620379271962001 0.89045286 0.5157001 prediction 0.552278956476255 Functional Loss - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895879 chr7:90895882 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_58649 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:90895819-90895886
64251 chr2 223423493 223423493 1 + G T UCEC 223423491 + 223423471 223423511 41 TCATGGTTCAAGGTGGTCACCAGGAACAAGGAGGCCAGGCG TCATGGTTCAAGGTGGTCACCATGAACAAGGAGGCCAGGCG < 41bp 0.860466534171967 0.58434000382098 0.8899528 0.25802934 prediction 0.552253060701974 Functional Loss - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423491 chr2:223423493 nonsynonymous SNV 0.981 1 23 hm5C_associated_SNPs_58650 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:223423491-223423533
64251 chrX 205453 205453 1 + G T LUSC 205450 + 205430 205470 41 ACAAGAAGTCCCCCATTTCGCACGAGGAGTCCCGGCTGCTG ACAAGAAGTCCCCCATTTCGCACTAGGAGTCCCGGCTGCTG < 41bp 0.902436017563285 0.626332745503472 0.1982907 0.06984055 prediction 0.552206544119627 Functional Loss - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:205450 chrX:205453 stopgain 0.017 0 24 hm5C_associated_SNPs_58652 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:205421-205453
64251 chr2 160605230 160605230 1 + G T LIHC 160605228 + 160605208 160605248 41 TGGAAGAAATACAGGAATATCAGGGATTCTTCCTGGTTCCT TGGAAGAAATACAGGAATATCATGGATTCTTCCTGGTTCCT < 41bp 0.854406466314131 0.578306274793249 0.9491861 0.47781503 prediction 0.552200383041765 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160605228 chr2:160605230 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_58653 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:160605176-160605233
64251 chr11 63670616 63670616 1 + G T LUSC 63670614 + 63670594 63670634 41 GCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTGA GCCTCGGCCAGGCCTCCATCCATAATGGCAAAGACAGGTGA < 41bp 0.776089296423403 0.433410152097709 0.21347436 0.15792605 prediction 0.552178592846805 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63670614 chr11:63670616 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58655 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63670605-63670626
64251 chr14 93299613 93299613 1 + C T rs533608285 93299611 + 93299591 93299631 41 TGGTCTTTCAACTGGAGCGCCTCGAACAGCAGATGAACTCC TGGTCTTTCAACTGGAGCGCCTTGAACAGCAGATGAACTCC < 41bp 0.776078510754468 0.485933308026589 0.9235791 0.1810152 prediction 0.552157021508936 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299611 chr14:93299613 synonymous SNV . 0 23 hm5C_associated_SNPs_58656 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:93299592-93299630
64251 chr15 76225229 76225229 1 + A T UCEC 76225225 + 76225205 76225245 41 CATGCGTTGGCAGGGGCTTTCAGTATTACAGAGCCAAGGGG CATGCGTTGGCAGGGGCTTTCAGTTTTACAGAGCCAAGGGG < 41bp 0.77607230028382 0.484927913743941 0.76762843 0.5802412 prediction 0.55214460056764 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76225225 chr15:76225229 nonsynonymous SNV 0.612 0 25 hm5C_associated_SNPs_58657 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr15:76225177-76225249
64251 chr7 116830916 116830916 1 + G T LUAD 116830913 + 116830893 116830933 41 CTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAG CTCCTGAGGCTGCATCTCGGCGGTGGCTGAGCACAGCAGAG < 41bp 0.90118717896943 0.625115068416994 0.90117526 0.42890495 prediction 0.552144221104873 Functional Loss - ST7 ENSG00000004866 CDS Human protein_coding chr7:116830913 chr7:116830916 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58658 0 0 2 BUD13 POSTAR2 ENCODE chr7:116830882-116830945
64251 chr1 240255905 240255905 1 + G T SARC 240255903 + 240255883 240255923 41 GATCGCCGAGGATGTGGAAACTGCAGCAGGGGCGCAGGATG GATCGCCGAGGATGTGGAAACTTCAGCAGGGGCGCAGGATG < 41bp 0.832993261915161 0.556936260743746 0.39152557 0.15702951 prediction 0.55211400234283 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240255903 chr1:240255905 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_58659 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:240255905-240255906
64251 chr1 117618069 117618069 1 + G T LIHC 117618067 + 117618047 117618087 41 CTCAACAAGGAGTACACGAACTGGGAGGCTAAAGAAACAAA CTCAACAAGGAGTACACGAACTTGGAGGCTAAAGAAACAAA < 41bp 0.776046071559333 0.450032110455852 0.21892673 0.08984473 prediction 0.552092143118665 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618067 chr1:117618069 nonsynonymous SNV 0.426 1 23 hm5C_associated_SNPs_58662 0 0 3 GRWD1 POSTAR2 ENCODE chr1:117617982-117618073
64251 chr17 36909562 36909562 1 + G T SARC 36909560 + 36909540 36909580 41 CCGGCTGTACATCGGTCTGGCCGGGCTCGCCACTGACGTCC CCGGCTGTACATCGGTCTGGCCTGGCTCGCCACTGACGTCC < 41bp 0.776038115744092 0.429868297630495 0.86085224 0.12972832 prediction 0.552076231488185 Functional Loss - PSMB3 ENSG00000108294 CDS Human other chr17:36909560 chr17:36909562 nonsynonymous SNV 0.980 3 23 hm5C_associated_SNPs_58663 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr17:36909548-36909574
64251 chr17 4437100 4437100 1 + G T LUSC 4437097 + 4437077 4437117 41 CGGCAGATCTGTATCTTCGTCGGGGAGACGCTGCTGTTTTC CGGCAGATCTGTATCTTCGTCGGTGAGACGCTGCTGTTTTC < 41bp 0.77603093571573 0.381420949132419 0.9257699 0.51734567 prediction 0.55206187143146 Functional Loss - SPNS2 ENSG00000183018 CDS Human protein_coding chr17:4437097 chr17:4437100 synonymous SNV . 0 24 hm5C_associated_SNPs_58665 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:4437098-4437116
64251 chr12 22814072 22814072 1 + G T SARC 22814070 + 22814050 22814090 41 TGAAGGAGATTCTTTCCAACCTGGGCTCACCTGTTGTGCTT TGAAGGAGATTCTTTCCAACCTTGGCTCACCTGTTGTGCTT < 41bp 0.836411750185561 0.56042046670511 0.22087073 0.023289025 prediction 0.551982566960902 Functional Loss - ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22814070 chr12:22814072 synonymous SNV . 0 23 hm5C_associated_SNPs_58672 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:22814026-22814080
64251 chr17 58711271 58711271 1 + C T GBM 58711269 + 58711249 58711289 41 GGAAACGACCTCGACTCACTCACAATGGACCTGTTAGAAGG GGAAACGACCTCGACTCACTCATAATGGACCTGTTAGAAGG < 41bp 0.776362401436704 0.500371755686948 0.07500565 0.23100099 prediction 0.551981291499511 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58711269 chr17:58711271 synonymous SNV . 0 23 hm5C_associated_SNPs_58673 0 0 10 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:58711243-58711281
64251 chr19 5686478 5686478 1 + G T SARC 5686476 + 5686456 5686496 41 CCCCAAGGTCTTCTACATCGCGGCGGACATGGCCTCCCCTG CCCCAAGGTCTTCTACATCGCGTCGGACATGGCCTCCCCTG < 41bp 0.861434130235076 0.585448508527384 0.9259082 0.3381384 prediction 0.551971243415383 Functional Loss - HSD11B1L ENSG00000167733 CDS Human protein_coding chr19:5686476 chr19:5686478 nonsynonymous SNV 0.753 1 23 hm5C_associated_SNPs_58675 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:5686461-5686484
64251 chr5 41904475 41904475 1 + G C UCS 41904474 + 41904454 41904494 41 CCCGCCGATTGTGGCCATGGCGGCCGCAGTCTCTAGTGTGG CCCGCCGATTGTGGCCATGGCCGCCGCAGTCTCTAGTGTGG < 41bp 0.775977135963746 0.497834923942843 0.54772615 0.35433733 prediction 0.551954271927493 Functional Loss - C5orf51 ENSG00000205765 CDS Human protein_coding chr5:41904474 chr5:41904475 synonymous SNV . 0 22 hm5C_associated_SNPs_58676 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:41904460-41904480
64251 chr11 67378885 67378885 1 + G T UCEC 67378883 + 67378863 67378903 41 TGGGGCCCCAGGGGGTGTCACGGGCGGCTGGGACAACCTCC TGGGGCCCCAGGGGGTGTCACGTGCGGCTGGGACAACCTCC < 41bp 0.872212603737536 0.596262187262882 0.9299475 0.9089164 prediction 0.551900832949306 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378883 chr11:67378885 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_58681 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:67378879-67378909
64251 chr18 56338884 56338884 1 + G T rs373689542 56338882 + 56338862 56338902 41 CGCCGGCGAGGGCCATGTCGCTGTTGGGGGACCCGCTACAG CGCCGGCGAGGGCCATGTCGCTTTTGGGGGACCCGCTACAG < 41bp 0.854132054434891 0.578198991607265 0.6819272 0.43965924 prediction 0.551866125655252 Functional Loss - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56338882 chr18:56338884 synonymous SNV . 0 23 hm5C_associated_SNPs_58683 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr18:56338884-56338885
64251 chr2 109463278 109463278 1 + C T SKCM 109463276 + 109463256 109463296 41 TAAAGGAATTCAGGATAATTCTCCACAGCATTCTGTGGAGA TAAAGGAATTCAGGATAATTCTTCACAGCATTCTGTGGAGA < 41bp 0.794921336860229 0.518994252141041 0.9229177 0.05780825 prediction 0.551854169438375 Functional Loss - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109463276 chr2:109463278 nonsynonymous SNV 0.579 0 23 hm5C_associated_SNPs_58685 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109463241-109463278
64251 chr12 32480553 32480553 1 + G T LUAD 32480550 + 32480530 32480570 41 CTGCAAAGCAGCAAGGAGCTCAAGGCTGAGCTGGACGGGGA CTGCAAAGCAGCAAGGAGCTCAATGCTGAGCTGGACGGGGA < 41bp 0.775923761153334 0.393648402460473 0.7870877 0.3640961 prediction 0.551847522306669 Functional Loss - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32480550 chr12:32480553 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_58686 0 0 1 EIF3H POSTAR2 ENCODE chr12:32480494-32480576
64251 chr1 228335351 228335351 1 + G T UCEC 228335348 + 228335328 228335368 41 CGGCAGCGCAACACTGAAACCGAGGAGAGCCTGGTGAAGCG CGGCAGCGCAACACTGAAACCGATGAGAGCCTGGTGAAGCG < 41bp 0.904256995526652 0.628339199192773 0.8880428 0.5271757 prediction 0.551835592667757 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335348 chr1:228335351 nonsynonymous SNV 0.970 1 24 hm5C_associated_SNPs_58689 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228335318-228335388
64251 chr10 121436371 121436371 1 + G T LUSC 121436369 + 121436349 121436389 41 TCCTGGAGAAGGTACAGGGGCTGGAGCAGGCTGTAGACAAC TCCTGGAGAAGGTACAGGGGCTTGAGCAGGCTGTAGACAAC < 41bp 0.839297856114276 0.563393835404513 0.7401415 0.4737171 prediction 0.551808041419525 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436369 chr10:121436371 synonymous SNV . 0 23 hm5C_associated_SNPs_58690 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr10:121436362-121436384
64251 chr14 50065784 50065784 1 + G C OV 50065783 + 50065763 50065803 41 GTGATCAGCCGGCACTTGCCCGCCTTGGGGCTTAGGAACCG GTGATCAGCCGGCACTTGCCCCCCTTGGGGCTTAGGAACCG < 41bp 0.775895853125867 0.482761292860021 0.09559798 0.012691349 prediction 0.551791706251733 Functional Loss - LRR1 ENSG00000165501 CDS Human protein_coding chr14:50065783 chr14:50065784 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_58691 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:50065777-50065815
64251 chr7 142961652 142961652 1 + C T SKCM 142961650 + 142961630 142961670 41 TCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCA TCTCCTGGCAGGAAACAAGCCTTCAGGTCTGCTTCCCCGCA < 41bp 0.794789944148014 0.518901311263344 0.9337709 0.09697366 prediction 0.55177726576934 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142961650 chr7:142961652 nonsynonymous SNV 0.103 4 23 hm5C_associated_SNPs_58695 0 0 1 GRWD1 POSTAR2 ENCODE chr7:142961638-142961678
64251 chr9 131262412 131262412 1 + A C LUAD 131262408 + 131262388 131262428 41 CGCCTGGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAA CGCCTGGAGCAGTCCGAGAGCACCCACCGCAGCATGCAGAA < 41bp 0.775885976860282 0.388658048913485 0.20917442 0.11441037 prediction 0.551771953720565 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262408 chr9:131262412 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_58696 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:131262378-131262413
64251 chr3 152163159 152163159 1 + C T STAD 152163157 + 152163137 152163177 41 GCTGACAGCACAATGATTGACACCAATGACAACACAGTCAC GCTGACAGCACAATGATTGACATCAATGACAACACAGTCAC < 41bp 0.77588193435317 0.495794141854427 0.02383864 0.018570632 prediction 0.551763868706341 Functional Loss - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152163157 chr3:152163159 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58697 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:152163150-152163160
64251 chr16 20788842 20788842 1 + C T BRCA 20788840 + 20788820 20788860 41 TCCAAATGTGAAAATCTGCACTCCAAGCTGATTGTATCAGA TCCAAATGTGAAAATCTGCACTTCAAGCTGATTGTATCAGA < 41bp 0.775880562413201 0.483383722709923 0.9123194 0.025108725 prediction 0.551761124826402 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20788840 chr16:20788842 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_58698 0 0 1 IGF2BP1 POSTAR2 ENCODE chr16:20788772-20788843
64251 chr12 68052160 68052160 1 + G T LAML 68052158 + 68052138 68052178 41 GGGGGAAACTGAGGGGCCCACCGGAGAGCAGAGAGTGGGGG GGGGGAAACTGAGGGGCCCACCTGAGAGCAGAGAGTGGGGG < 41bp 0.864597686123802 0.58872372174126 0.5688156 0.21645874 prediction 0.551747928765084 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68052158 chr12:68052160 synonymous SNV . 0 23 hm5C_associated_SNPs_58701 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:68052160-68052180
64251 chr14 54878228 54878228 1 + G T UCEC 54878225 + 54878205 54878245 41 AACTAAAGAGCTGTGGTATACAAGACATATTTGTTTTCTGC AACTAAAGAGCTGTGGTATACAATACATATTTGTTTTCTGC < 41bp 0.775868907321556 0.408841313101752 0.3866509 0.11556783 prediction 0.551737814643112 Functional Loss - CDKN3 ENSG00000100526 CDS Human protein_coding chr14:54878225 chr14:54878228 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_58702 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:54878205-54878228
64251 chr22 50637625 50637625 1 + A C rs55810238 50637621 + 50637601 50637641 41 ATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAG ATTCGTGTTCTTGGGTCTGTCCCGCGTGGGCTCGCGTGCAG < 41bp 0.87597132890371 0.600122146486227 0.26267582 0.14248395 prediction 0.551698364834966 Functional Loss - TRABD ENSG00000273253 ncRNA_exonic Human antisense chr22:50637621 chr22:50637625 . . 0 25 hm5C_associated_SNPs_58707 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:50637476-50637632
64251 chr1 211462606 211462606 1 + G T SARC 211462604 + 211462584 211462624 41 TACAACATCGCCATCATTCTCAGCGTTCTAAGTGCCGTCCA TACAACATCGCCATCATTCTCATCGTTCTAAGTGCCGTCCA < 41bp 0.86048914155417 0.58465862911252 0.93373567 0.90691257 prediction 0.5516610248833 Functional Loss - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211462604 chr1:211462606 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_58711 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:211462598-211462627
64251 chr8 6301970 6301970 1 + G T THYM 6301968 + 6301948 6301988 41 TGATGATCTTTGTGGAAACTCAGGATGTGGAAATCAGGAAA TGATGATCTTTGTGGAAACTCATGATGTGGAAATCAGGAAA < 41bp 0.825152083101505 0.549345751222401 0.74898535 0.17365646 prediction 0.551612663758207 Functional Loss - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6301968 chr8:6301970 stopgain 0.566 0 23 hm5C_associated_SNPs_58715 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr8:6301962-6301988
64251 chr6 160525909 160525909 1 + G T LUSC 160525906 + 160525886 160525926 41 ATCCCAGAGGTGAAAGTTCACTCGGGCAGGGGAGCTGGGGC ATCCCAGAGGTGAAAGTTCACTCTGGCAGGGGAGCTGGGGC < 41bp 0.775803139876038 0.41152461279266 0.13791493 0.054719836 prediction 0.551606279752075 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160525906 chr6:160525909 synonymous SNV . 0 24 hm5C_associated_SNPs_58716 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:160525876-160525912
64251 chr1 151006704 151006704 1 + G T UCEC 151006701 + 151006681 151006721 41 TCTACCACAGCCTCCCTGTCCAAGAAGTGACTGTTGAGAGG TCTACCACAGCCTCCCTGTCCAATAAGTGACTGTTGAGAGG < 41bp 0.775801042930355 0.394074797477931 0.21965656 0.072797894 prediction 0.551602085860711 Functional Loss - PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006701 chr1:151006704 nonsynonymous SNV 0.904 0 24 hm5C_associated_SNPs_58718 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006680-151006704
64251 chr15 78764260 78764260 1 + G T LUAD 78764257 + 78764237 78764277 41 TGGTGAATGGTTTAGGGATTCTGGGGTGGGGTAAGTAAATG TGGTGAATGGTTTAGGGATTCTGTGGTGGGGTAAGTAAATG < 41bp 0.775785873558276 0.413178913134165 0.8801953 0.27860266 prediction 0.551571747116551 Functional Loss - IREB2 ENSG00000136381 CDS Human protein_coding chr15:78764257 chr15:78764260 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_58719 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr15:78764235-78764279
64251 chrX 64955277 64955277 1 + A T UCEC 64955273 + 64955253 64955293 41 CACAGGCCCGGGAGGAGAAGCACCAGAAGCAGATGGAGCGG CACAGGCCCGGGAGGAGAAGCACCTGAAGCAGATGGAGCGG < 41bp 0.863422217480731 0.58763682693533 0.26843607 0.36761564 prediction 0.551570781090802 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64955273 chrX:64955277 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_58720 0 0 2 UCHL5 POSTAR2 ENCODE chrX:64955229-64955282
64251 chr17 20156834 20156834 1 + G T PAAD 20156832 + 20156812 20156852 41 TTACAGAGGCATTCGACTTACAGCAGTGTGCGGCCAGCCAG TTACAGAGGCATTCGACTTACATCAGTGTGCGGCCAGCCAG < 41bp 0.851812677314947 0.576040453331239 0.45824233 0.39677614 prediction 0.551544447967415 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20156832 chr17:20156834 nonsynonymous SNV 0.229 1 23 hm5C_associated_SNPs_58721 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:20156816-20156849
64251 chr16 83949314 83949314 1 + A C rs576158206 83949310 + 83949290 83949330 41 CGGTTGTGGGTGCGGGTGCACACAAATGAGTGGGTTGCTGT CGGTTGTGGGTGCGGGTGCACACACATGAGTGGGTTGCTGT < 41bp 0.775769999128846 0.407059793296349 0.22433102 0.13597447 prediction 0.551539998257692 Functional Loss - MLYCD ENSG00000103150 UTR3 Human protein_coding chr16:83949310 chr16:83949314 . . 0 25 hm5C_associated_SNPs_58722 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:83949314-83949315
64251 chr8 21840253 21840253 1 + G T ESCA 21840250 + 21840230 21840270 41 AAGCCACAGAGCCCCACATGCTGGAAACTTACACTCCTGAG AAGCCACAGAGCCCCACATGCTGTAAACTTACACTCCTGAG < 41bp 0.899428195593719 0.623659649902401 0.32592052 0.14429325 prediction 0.551537091382637 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21840250 chr8:21840253 stopgain 0.999 1 24 hm5C_associated_SNPs_58723 0 0 8 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:21840240-21840265
64251 chr11 60689595 60689595 1 + G T COAD 60689592 + 60689572 60689612 41 GTGGAGGAGCTGCGCTGGCGCCAGAGGCGAGCGGCCAAGGG GTGGAGGAGCTGCGCTGGCGCCATAGGCGAGCGGCCAAGGG < 41bp 0.894443298970774 0.618678150276413 0.8837081 0.6886924 prediction 0.551530297388723 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689592 chr11:60689595 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_58724 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:60689563-60689595
64251 chr14 24619482 24619482 1 + G C CESC 24619478 + 24619458 24619498 41 GGTTGGGAACTGAGGGTCCCCAAGGAACTGGAGGCCTAGAA GGTTGGGAACTGAGGGTCCCCAAGCAACTGGAGGCCTAGAA < 41bp 0.775747229158949 0.495606745450047 0.77238977 0.33036244 prediction 0.551494458317899 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619478 chr14:24619482 nonsynonymous SNV 0.863 0 25 hm5C_associated_SNPs_58727 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24619475-24619533
64251 chr16 57416310 57416310 1 + G C HNSC 57416309 + 57416289 57416329 41 CTGTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACT CTGTGGGCACGGAGCTTTTCCCAGTGCCTCCCGTCTCCACT < 41bp 0.775714212711624 0.466415347482981 0.92075896 0.37619317 prediction 0.551428425423248 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416309 chr16:57416310 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_58732 0 0 3 RBM15 POSTAR2 ENCODE chr16:57416299-57416343
64251 chr19 15223231 15223231 1 + G T COAD 15223229 + 15223209 15223249 41 CCTACAACCGCATGACCCCACAGAACTTGGCCGTGTGCTTC CCTACAACCGCATGACCCCACATAACTTGGCCGTGTGCTTC < 41bp 0.77568955051072 0.428894613205345 0.19717744 0.097444504 prediction 0.551379101021441 Functional Loss - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15223229 chr19:15223231 nonsynonymous SNV 0.970 3 23 hm5C_associated_SNPs_58734 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:15223231-15223256
64251 chr18 662237 662237 1 + C T SKCM 662235 + 662215 662255 41 TTTTTGGACAGCCTGGGATTCTCCACCAGAGAAGAAGGGGA TTTTTGGACAGCCTGGGATTCTTCACCAGAGAAGAAGGGGA < 41bp 0.775679520801785 0.489848052937736 0.9496877 0.30069387 prediction 0.551359041603571 Functional Loss - TYMS ENSG00000176890 CDS Human protein_coding chr18:662235 chr18:662237 nonsynonymous SNV 0.530 0 23 hm5C_associated_SNPs_58738 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:662162-662254
64251 chr7 99048393 99048393 1 + G C LUSC 99048389 + 99048369 99048409 41 AATTACCTCGTGGGATTCTGCCCGGAGGGGCCCTCGTGTAA AATTACCTCGTGGGATTCTGCCCGCAGGGGCCCTCGTGTAA < 41bp 0.77772100579412 0.502100384460664 0.15815735 0.09146762 prediction 0.551241242666912 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99048389 chr7:99048393 nonsynonymous SNV 0.845 2 25 hm5C_associated_SNPs_58744 0 0 1 SRSF1 POSTAR2 ENCODE chr7:99048374-99048424
64251 chr6 35436793 35436793 1 + G T LUSC 35436790 + 35436770 35436810 41 CCCCAGAAGGACAAGCGCTTCTCGGGCACCGTCAGGTTGGC CCCCAGAAGGACAAGCGCTTCTCTGGCACCGTCAGGTTGGC < 41bp 0.775615250987188 0.404920143809123 0.0826247 0.067682475 prediction 0.551230501974377 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35436790 chr6:35436793 synonymous SNV . 0 24 hm5C_associated_SNPs_58745 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:35436731-35436819
64251 chr4 153802155 153802155 1 + C T COAD 153802153 + 153802133 153802173 41 TCTGAGAAGCTAGGCCGTGGCTCAAGAACTGTGGACCTTGA TCTGAGAAGCTAGGCCGTGGCTTAAGAACTGTGGACCTTGA < 41bp 0.798159366449099 0.522545594009606 0.14293352 0.053922445 prediction 0.551227544878987 Functional Loss - ARFIP1 ENSG00000164144 CDS Human protein_coding chr4:153802153 chr4:153802155 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58747 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:153802127-153802155
64251 chr21 17203752 17203752 1 + C T rs143731450 17203750 + 17203730 17203770 41 GATTACATGCCGTTTTAGTTCACGAAGGCCAAGCTAATGCT GATTACATGCCGTTTTAGTTCATGAAGGCCAAGCTAATGCT < 41bp 0.786513401383683 0.510903213070665 0.19479403 0.12630284 prediction 0.551220376626034 Functional Loss - USP25 ENSG00000155313 CDS Human protein_coding chr21:17203750 chr21:17203752 synonymous SNV . 0 23 hm5C_associated_SNPs_58748 0 0 3 U2AF2 POSTAR2 ENCODE chr21:17203708-17203800
64251 chr13 88330362 88330362 1 + G T LUAD 88330360 + 88330340 88330380 41 TCAGTATTTGCACCCGGGGGCAGGGGACAGCAGGCTACGGG TCAGTATTTGCACCCGGGGGCATGGGACAGCAGGCTACGGG < 41bp 0.775601011605632 0.436521806628732 0.9395184 0.6639151 prediction 0.551202023211265 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88330360 chr13:88330362 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_58751 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:88330343-88330369
64251 chr9 119461125 119461125 1 + A T STAD 119461121 + 119461101 119461141 41 GATGGGGGCCAAAGGCAGCACTCCAGGAATGTTCAATCTTC GATGGGGGCCAAAGGCAGCACTCCTGGAATGTTCAATCTTC < 41bp 0.775596333842397 0.432612000464641 0.9527551 0.19685239 prediction 0.551192667684794 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461121 chr9:119461125 synonymous SNV . 0 25 hm5C_associated_SNPs_58753 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:119461120-119461140
64251 chr13 114294517 114294517 1 + G T LUAD 114294514 + 114294494 114294534 41 GCGGCTCCAGGGTGGAGACTCCGGTGTCCTACGTCGGGGAG GCGGCTCCAGGGTGGAGACTCCGTTGTCCTACGTCGGGGAG < 41bp 0.775588481930501 0.393025775781893 0.9010394 0.2926041 prediction 0.551176963861002 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114294514 chr13:114294517 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_58758 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:114294449-114294613
64251 chr1 11716154 11716154 1 + G T BLCA 11716152 + 11716132 11716172 41 CCTCCTGCACAACCCGTGCGCTGAAGGTGGGGTACAGGCCG CCTCCTGCACAACCCGTGCGCTTAAGGTGGGGTACAGGCCG < 41bp 0.775566008928805 0.443486091355775 0.12801757 0.05823204 prediction 0.551132017857611 Functional Loss - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11716152 chr1:11716154 stopgain 0.944 1 23 hm5C_associated_SNPs_58763 0 0 8 GRWD1 POSTAR2 ENCODE chr1:11716110-11716157
64251 chr8 68070788 68070788 1 + A C LUAD 68070784 + 68070764 68070804 41 AACAGAGGGCACGAATTCAGCAGGAGTATGAAGAGGAACAG AACAGAGGGCACGAATTCAGCAGGCGTATGAAGAGGAACAG < 41bp 0.901590499422358 0.626037848937086 0.52841777 0.79141825 prediction 0.551105300970544 Functional Loss - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68070784 chr8:68070788 nonsynonymous SNV 0.982 0 25 hm5C_associated_SNPs_58764 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:68070760-68070800
64251 chr19 11032328 11032328 1 + G T HNSC 11032325 + 11032305 11032345 41 CAGGGCAGTGGTGGTGGCAGCACGAGTGCCCACTATGCAGT CAGGGCAGTGGTGGTGGCAGCACTAGTGCCCACTATGCAGT < 41bp 0.89520773726514 0.619676591412357 0.82551825 0.3964911 prediction 0.551062291705565 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11032325 chr19:11032328 synonymous SNV . 0 24 hm5C_associated_SNPs_58767 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11032288-11032330
64251 chr11 67376963 67376963 1 + G T STAD 67376961 + 67376941 67376981 41 GAACGCAGACGAGGGGGAGCCGGGCACCTGCAAGGACCGGG GAACGCAGACGAGGGGGAGCCGTGCACCTGCAAGGACCGGG < 41bp 0.775519772251554 0.428767330607297 0.8276087 0.29976463 prediction 0.551039544503109 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376961 chr11:67376963 nonsynonymous SNV 0.987 5 23 hm5C_associated_SNPs_58768 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr8 145066735 145066735 1 + G T THYM 145066732 + 145066712 145066752 41 TCTTCATCCGGAACCGCATCCTGGAGATCGTGTACGCCTCA TCTTCATCCGGAACCGCATCCTGTAGATCGTGTACGCCTCA < 41bp 0.897734308407227 0.622217320015648 0.3217647 0.14192787 prediction 0.551033976783159 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066732 chr8:145066735 stopgain 0.997 1 24 hm5C_associated_SNPs_58769 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145066731-145066760
64251 chr1 109756738 109756738 1 + G C BLCA 109756737 + 109756717 109756757 41 CAGCTGGTGAAGGCAGACAGCGAGTGGCGACGATGTAAGTA CAGCTGGTGAAGGCAGACAGCCAGTGGCGACGATGTAAGTA < 41bp 0.775506870574237 0.492504563888064 0.69245464 0.35281897 prediction 0.551013741148473 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109756737 chr1:109756738 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_58774 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:109756648-109756745
64251 chr7 36492565 36492565 1 + G T rs78095444 36492563 + 36492543 36492583 41 CTTGAAGCAGCAACGTCTTTCAGGGGTTGGAGACAGAAACC CTTGAAGCAGCAACGTCTTTCATGGGTTGGAGACAGAAACC < 41bp 0.835358972750448 0.559880537466107 0.9418746 0.88018376 prediction 0.55095687056868 Functional Loss - ANLN ENSG00000011426 UTR3 Human protein_coding chr7:36492563 chr7:36492565 . . 0 23 hm5C_associated_SNPs_58775 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr7:36492518-36492575
64251 chr7 141490252 141490252 1 + A C READ 141490248 + 141490228 141490268 41 GGAAATGGAAGCCTGGTGGTCTGGAGTTTTAGAGAATGGAT GGAAATGGAAGCCTGGTGGTCTGGCGTTTTAGAGAATGGAT < 41bp 0.88605956490466 0.610593329263095 0.19705722 0.19999924 prediction 0.55093247128313 Functional Loss - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490248 chr7:141490252 nonsynonymous SNV 0.135 3 25 hm5C_associated_SNPs_58777 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:141490237-141490258
64251 chr9 131670664 131670664 1 + C T BLCA 131670662 + 131670642 131670682 41 ACAAGCTGCGGCAGCTGAACCTCAACAACGAGTGGACGCTG ACAAGCTGCGGCAGCTGAACCTTAACAACGAGTGGACGCTG < 41bp 0.779039693110797 0.503584612467707 0.3619377 0.05826935 prediction 0.550910161286181 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670662 chr9:131670664 synonymous SNV . 0 23 hm5C_associated_SNPs_58780 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:131670646-131670671
64251 chr19 36486268 36486268 1 + G C BLCA 36486267 + 36486247 36486287 41 GGAAGCCGGGCGCCGAGGCGCGAGTGCGGGCAGAGTTCCGG GGAAGCCGGGCGCCGAGGCGCCAGTGCGGGCAGAGTTCCGG < 41bp 0.805780175023545 0.530365975421985 0.8837702 0.7325959 prediction 0.550828399203119 Functional Loss - SDHAF1 ENSG00000205138 CDS Human protein_coding chr19:36486267 chr19:36486268 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_58785 0 0 2 DDX3X POSTAR2 ENCODE chr19:36486214-36486270
64251 chr17 78091470 78091470 1 + G T UCEC 78091467 + 78091447 78091487 41 CGTGAGCCAGCCATCCACAGCGAGGGGCAGTGGGTGACGCT CGTGAGCCAGCCATCCACAGCGATGGGCAGTGGGTGACGCT < 41bp 0.775404647535568 0.381582474603962 0.9016042 0.3979305 prediction 0.550809295071136 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78091467 chr17:78091470 nonsynonymous SNV 0.950 1 24 hm5C_associated_SNPs_58788 0 0 3 RPS3 POSTAR2 ENCODE chr17:78091427-78091504
64251 chr12 64173835 64173835 1 + G C LUAD 64173834 + 64173814 64173854 41 ACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCCGGCCGGG ACCACGTCTTCTTCGGGCGCCCCCGCCAGGCGCCGGCCGGG < 41bp 0.775404636213418 0.481641224882419 0.8530375 0.34437448 prediction 0.550809272426835 Functional Loss - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173834 chr12:64173835 nonsynonymous SNV 0.882 2 22 hm5C_associated_SNPs_58789 0 0 1 DDX3X POSTAR2 ENCODE chr12:64173807-64173911
64251 chr10 127429072 127429072 1 + A C STAD 127429068 + 127429048 127429088 41 GGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTT GGGCAATTATTCCAGTCAATCTGGCATGATCCCTGGCTCTT < 41bp 0.911739563916066 0.63636222017685 0.8989236 0.4002204 prediction 0.550754687478433 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127429068 chr10:127429072 synonymous SNV . 0 25 hm5C_associated_SNPs_58793 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:127429064-127429089
64251 chr22 31672785 31672785 1 + G C STAD 31672784 + 31672764 31672804 41 TCTACTTTCAGAGCCCCCCCCGGGGCCGCAGGAGAGGGCCC TCTACTTTCAGAGCCCCCCCCCGGGCCGCAGGAGAGGGCCC < 41bp 0.829972808012811 0.554596721971307 0.9097697 0.26914936 prediction 0.550752172083009 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31672784 chr22:31672785 nonsynonymous SNV 0.011 2 22 hm5C_associated_SNPs_58794 0 0 3 CSTF2T POSTAR2 ENCODE chr22:31672774-31672846
64251 chr19 1226530 1226530 1 + G T ESCA 1226528 + 1226508 1226548 41 GGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCA GGCCGTGTGTATGAACGGCACATAGGCGGCGCAGCTGAGCA < 41bp 0.775372482472308 0.43514888667096 0.15708572 0.08410421 prediction 0.550744964944617 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1226528 chr19:1226530 stopgain 0.163 1 23 hm5C_associated_SNPs_58795 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1226485-1226544
64251 chr2 20647433 20647433 1 + G T LUSC 20647431 + 20647411 20647451 41 GCCAGGAGGACTACGACCGCCTGCGGCCGCTCTCCTACCCG GCCAGGAGGACTACGACCGCCTTCGGCCGCTCTCCTACCCG < 41bp 0.842704413263597 0.567350103204016 0.8215241 0.7836337 prediction 0.550708620119161 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647431 chr2:20647433 synonymous SNV . 0 23 hm5C_associated_SNPs_58801 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:20647380-20647440
64251 chrX 68836251 68836251 1 + G T LUSC 68836249 + 68836229 68836269 41 GGTGTGGCGGGGCCCCTGCCCGGGCGGGCGAAGGGAACAGC GGTGTGGCGGGGCCCCTGCCCGTGCGGGCGAAGGGAACAGC < 41bp 0.852406632952428 0.577133851449714 0.91260755 0.65049005 prediction 0.550545563005429 Functional Loss - EDA ENSG00000158813 CDS Human protein_coding chrX:68836249 chrX:68836251 synonymous SNV . 0 23 hm5C_associated_SNPs_58812 0 0 2 DDX3X POSTAR2 ENCODE chrX:68836148-68836269
64251 chr9 117086070 117086070 1 + G C CESC 117086066 + 117086046 117086086 41 AGACAGAGGACACGATCTTTCTCAGAGAGTACCAGACCCGG AGACAGAGGACACGATCTTTCTCACAGAGTACCAGACCCGG < 41bp 0.801481585594186 0.526212093478831 0.10658339 0.14524993 prediction 0.550538984230711 Functional Loss - ORM1 ENSG00000229314 CDS Human protein_coding chr9:117086066 chr9:117086070 nonsynonymous SNV 0.003 3 25 hm5C_associated_SNPs_58815 0 0 7 GRWD1 POSTAR2 ENCODE chr9:117086052-117086072
64251 chr9 86617525 86617525 1 + G T KIRP 86617522 + 86617502 86617542 41 TGTCTGATGGTACTGCATATCTAGATGTAGACTTTGTGGAT TGTCTGATGGTACTGCATATCTATATGTAGACTTTGTGGAT < 41bp 0.775258895376174 0.450345213966967 0.2890077 0.15722096 prediction 0.550517790752347 Functional Loss - RMI1 ENSG00000178966 CDS Human protein_coding chr9:86617522 chr9:86617525 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58817 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:86617493-86617529
64251 chr8 68049816 68049816 1 + G T LUSC 68049813 + 68049793 68049833 41 GGTGGAGGTGGTGCTCCTCTCAGGGATGCAAAAGGAAATCT GGTGGAGGTGGTGCTCCTCTCAGTGATGCAAAAGGAAATCT < 41bp 0.893869654839372 0.618641926850934 0.91493213 0.6384464 prediction 0.550455455976876 Functional Loss - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68049813 chr8:68049816 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_58824 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:68049800-68049820
64251 chr3 10290383 10290383 1 + G T rs115760832 10290381 + 10290361 10290401 41 CCGGCCCGGGTCTGGTTGGGCCGCAGGAGCAGGGCGGGCTG CCGGCCCGGGTCTGGTTGGGCCTCAGGAGCAGGGCGGGCTG < 41bp 0.837378871074442 0.562186264284744 0.867763 0.6439598 prediction 0.550385213579395 Functional Loss - TATDN2 ENSG00000157014 UTR5 Human protein_coding chr3:10290381 chr3:10290383 . . 0 23 hm5C_associated_SNPs_58831 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr3:10290348-10290383
64251 chr19 47861194 47861194 1 + G T LUSC 47861192 + 47861172 47861212 41 AGCTGGACCCGCGGCCTTTCCTGAGGGTGCTGGAGTCCATT AGCTGGACCCGCGGCCTTTCCTTAGGGTGCTGGAGTCCATT < 41bp 0.775165631471583 0.42946132389137 0.89812416 0.24942467 prediction 0.550331262943166 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47861192 chr19:47861194 synonymous SNV . 0 23 hm5C_associated_SNPs_58836 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:47861180-47861200
64251 chr3 101520480 101520480 1 + G T UCEC 101520478 + 101520458 101520498 41 TGGGCAGGGTGGTGGATTACCAGAATGGGTTTTACAAGGTT TGGGCAGGGTGGTGGATTACCATAATGGGTTTTACAAGGTT < 41bp 0.775158000706549 0.451361046847733 0.5480426 0.17897627 prediction 0.550316001413098 Functional Loss - NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101520478 chr3:101520480 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_58837 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:101520430-101520487
64251 chr2 12858703 12858703 1 + G T SARC 12858700 + 12858680 12858720 41 AGCGGAGAGGAGCTGGTGTGCAAGGTAAAGGGCCAGTGGGT AGCGGAGAGGAGCTGGTGTGCAATGTAAAGGGCCAGTGGGT < 41bp 0.775133272161131 0.385110915386715 0.8839698 0.27352425 prediction 0.550266544322263 Functional Loss - TRIB2 ENSG00000071575 CDS Human protein_coding chr2:12858700 chr2:12858703 nonsynonymous SNV 0.965 2 24 hm5C_associated_SNPs_58840 0 0 1 DGCR8 POSTAR2 ENCODE chr2:12858689-12858757
64251 chr9 34647934 34647934 1 + G T LUSC 34647932 + 34647912 34647952 41 GGGCCTCAGTCACAGAGGAGCTGGGTGCCCAGTACCCTTGG GGGCCTCAGTCACAGAGGAGCTTGGTGCCCAGTACCCTTGG < 41bp 0.874606253462711 0.599493570158595 0.88706124 0.41499782 prediction 0.550225366608233 Functional Loss - GALT ENSG00000213930 CDS Human protein_coding chr9:34647932 chr9:34647934 synonymous SNV . 0 23 hm5C_associated_SNPs_58841 0 0 2 PPIG POSTAR2 ENCODE chr9:34647901-34647962
64251 chrX 153669987 153669987 1 + G T SARC 153669985 + 153669965 153670005 41 CTCAGGTGGCCCGCTGCAAGCAGCTGATCTGTGACCCCAGC CTCAGGTGGCCCGCTGCAAGCATCTGATCTGTGACCCCAGC < 41bp 0.782867065405144 0.507758791414336 0.8904219 0.10773912 prediction 0.550216547981617 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153669985 chrX:153669987 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_58842 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153669970-153669990
64251 chr1 93672842 93672842 1 + G T PAAD 93672839 + 93672819 93672859 41 TTTCTTTAATGAATGAAAACCGAGAATTAAAGGTCCGTGTT TTTCTTTAATGAATGAAAACCGATAATTAAAGGTCCGTGTT < 41bp 0.775094591458114 0.423403498009157 0.82401216 0.26433095 prediction 0.550189182916229 Functional Loss - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93672839 chr1:93672842 stopgain 1.000 1 24 hm5C_associated_SNPs_58845 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:93672840-93672860
64251 chr3 37070325 37070325 1 + G T LUSC 37070322 + 37070302 37070342 41 GGAAATGGTGGAAGATGATTCCCGAAAGGAAATGACTGCAG GGAAATGGTGGAAGATGATTCCCTAAAGGAAATGACTGCAG < 41bp 0.847161679495299 0.572077766919323 0.15869623 0.10781926 prediction 0.550167825151952 Functional Loss - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37070322 chr3:37070325 nonsynonymous SNV 0.955 1 24 hm5C_associated_SNPs_58847 1 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37070304-37070327
64251 chr1 116939235 116939235 1 + G T COAD 116939233 + 116939213 116939253 41 ATTACAGGTCATCATGGTCACAGGAGACCATCCAATCACAG ATTACAGGTCATCATGGTCACATGAGACCATCCAATCACAG < 41bp 0.775083887416529 0.433807895358462 0.22768065 0.03804809 prediction 0.550167774833058 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116939233 chr1:116939235 stopgain 0.995 1 23 hm5C_associated_SNPs_58848 0 0 9 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:116939220-116939240
64251 chr12 93966827 93966827 1 + G C rs560378526 93966826 + 93966806 93966846 41 CAGACAGGTAGGGAGCCGATCGGCCGCGACGCGTGCGGGAG CAGACAGGTAGGGAGCCGATCCGCCGCGACGCGTGCGGGAG < 41bp 0.775080048112434 0.472815237869172 0.7809443 0.24471414 prediction 0.550160096224867 Functional Loss - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93966826 chr12:93966827 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_58849 0 0 1 BUD13 POSTAR2 ENCODE chr12:93966805-93966866
64251 chr22 46505777 46505777 1 + G T LIHC 46505774 + 46505754 46505794 41 TGCCATCGCCCAGGATGACTCAAGATGCCACCTGGGTAAGT TGCCATCGCCCAGGATGACTCAATATGCCACCTGGGTAAGT < 41bp 0.775074873989014 0.389128095624965 0.8838655 0.4281096 prediction 0.550149747978027 Functional Loss - MIRLET7BHG ENSG00000197182 CDS Human lincRNA chr22:46505774 chr22:46505777 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_58852 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:46505774-46505795
64251 chr3 41266938 41266938 1 + G T UCEC 41266936 + 41266916 41266956 41 CTGCTATTGTACGTACCATGCAGAATACAAATGATGTAGAA CTGCTATTGTACGTACCATGCATAATACAAATGATGTAGAA < 41bp 0.775072167028072 0.449646522301023 0.29650193 0.2000565 prediction 0.550144334056143 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266936 chr3:41266938 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_58854 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41266892-41267041
64251 chr1 151065700 151065700 1 + G T OV 151065698 + 151065678 151065718 41 ATGTGAATGCCAAGGACATGCTGAAGATGACAGCTTTGCAT ATGTGAATGCCAAGGACATGCTTAAGATGACAGCTTTGCAT < 41bp 0.860701387247779 0.585631984323509 0.27661136 0.23565671 prediction 0.55013880584854 Functional Loss - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151065698 chr1:151065700 synonymous SNV . 0 23 hm5C_associated_SNPs_58855 0 0 2 UCHL5 POSTAR2 ENCODE chr1:151065673-151065806
64251 chr6 41751967 41751967 1 + G T UCEC 41751965 + 41751945 41751985 41 TCCTGCAGCAACTCCCTCCGCAGGACATTGATGTGGGTCTC TCCTGCAGCAACTCCCTCCGCATGACATTGATGTGGGTCTC < 41bp 0.863665453161041 0.588598364789679 0.41664854 0.17300665 prediction 0.550134176742724 Functional Loss - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41751965 chr6:41751967 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58856 0 0 2 PPIG POSTAR2 ENCODE chr6:41751922-41751977
64251 chr22 29452661 29452661 1 + G T rs2294241 29452658 + 29452638 29452678 41 GTTGGGGTGTGGCAGTTGGGCAGGGTCAAGTGACCCAGCCC GTTGGGGTGTGGCAGTTGGGCAGTGTCAAGTGACCCAGCCC < 41bp 0.823348073558641 0.548286827819448 0.9238889 0.8241619 prediction 0.550122491478387 Functional Loss - ZNRF3 ENSG00000183579 UTR3 Human protein_coding chr22:29452658 chr22:29452661 . . 0 24 hm5C_associated_SNPs_58857 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:29452638-29452664
64251 chr4 54244174 54244174 1 + G C rs184914946 54244173 + 54244153 54244193 41 GGCCGGCGTCCCTGGCCTCTCGCGCCGCCGCTTCGGGCCTC GGCCGGCGTCCCTGGCCTCTCCCGCCGCCGCTTCGGGCCTC < 41bp 0.789214626254865 0.51415432872522 0.82895803 0.6876132 prediction 0.55012059505929 Functional Loss - FIP1L1 ENSG00000145216 intronic Human protein_coding chr4:54244173 chr4:54244174 . . 0 22 hm5C_associated_SNPs_58858 0 0 2 PRPF8 POSTAR2 ENCODE chr4:54244022-54244175
64251 chr22 31669471 31669471 1 + C T SKCM 31669469 + 31669449 31669489 41 GATGAGACGGTGGATATCTTCTCCTTTGGGATCGTTCTCTG GATGAGACGGTGGATATCTTCTTCTTTGGGATCGTTCTCTG < 41bp 0.775056380063158 0.480273775696557 0.21748233 0.15126282 prediction 0.550112760126316 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31669469 chr22:31669471 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_58860 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr22:31669454-31669482
64251 chr14 73412678 73412678 1 + G T HNSC 73412676 + 73412656 73412696 41 GTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAG GTATCATCAACCTGCAAAGTCTTAAGACCCCTACGCTCAAG < 41bp 0.775045104214693 0.444074501431013 0.047234446 0.040531665 prediction 0.550090208429385 Functional Loss - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73412676 chr14:73412678 synonymous SNV . 0 23 hm5C_associated_SNPs_58862 0 0 1 GRWD1 POSTAR2 ENCODE chr14:73412605-73412711
64251 chr4 59340 59340 1 + G T COAD 59337 + 59317 59357 41 TTTCAGGAACTCGTAACATTCAGGGATGTGGCCATAGAATT TTTCAGGAACTCGTAACATTCAGTGATGTGGCCATAGAATT < 41bp 0.775028653236477 0.400570830345713 0.8985194 0.25677907 prediction 0.550057306472954 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59337 chr4:59340 nonsynonymous SNV 0.507 1 24 hm5C_associated_SNPs_58865 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:59323-59354
64251 chr11 65385575 65385575 1 + G T LUAD 65385572 + 65385552 65385592 41 TGCTGAAGGGGAGCCTCAGCCAGGAGCTGAGCAAGAGCTTC TGCTGAAGGGGAGCCTCAGCCAGTAGCTGAGCAAGAGCTTC < 41bp 0.893454006935102 0.618427498527737 0.92766917 0.6331388 prediction 0.55005301681473 Functional Loss - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65385572 chr11:65385575 stopgain 0.999 0 24 hm5C_associated_SNPs_58868 0 0 2 DDX24 POSTAR2 ENCODE chr11:65385505-65385576
64251 chr19 50436240 50436240 1 + A C rs145654542 50436236 + 50436216 50436256 41 AGTGCCAGGGGCTGGAGGCACGGAATCGCGAGCTGAAGGAA AGTGCCAGGGGCTGGAGGCACGGACTCGCGAGCTGAAGGAA < 41bp 0.908428460472138 0.633411009197448 0.8441478 0.88795006 prediction 0.550034902549382 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50436236 chr19:50436240 nonsynonymous SNV 0.563 4 25 hm5C_associated_SNPs_58869 0 0 12 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:50436220-50436240
64251 chr1 166818363 166818363 1 + G C rs61744366 166818359 + 166818339 166818379 41 GGCTTCCCAGGGTATGACCTCTCGGCTGATGACATAGCTGG GGCTTCCCAGGGTATGACCTCTCGCCTGATGACATAGCTGG < 41bp 0.777161838336376 0.502148691861366 0.15133715 0.13114044 prediction 0.550026292950019 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818359 chr1:166818363 nonsynonymous SNV 0.470 1 25 hm5C_associated_SNPs_58870 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166818326-166818365
64251 chr19 54967589 54967589 1 + G T LUAD 54967586 + 54967566 54967606 41 GGAACCCGCCCCCTAAGGGCCGGGGCGGTCGAGGGGCCCAT GGAACCCGCCCCCTAAGGGCCGGTGCGGTCGAGGGGCCCAT < 41bp 0.77500980499309 0.37797797647859 0.7756684 0.23128638 prediction 0.550019609986179 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967586 chr19:54967589 nonsynonymous SNV 0.430 3 24 hm5C_associated_SNPs_58871 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:54967567-54967601
64251 chr3 133494394 133494394 1 + C T UCEC 133494392 + 133494372 133494412 41 AACTGCCACCTGGCCAGAGCCCCGAATCACGCTGTGGTCAC AACTGCCACCTGGCCAGAGCCCTGAATCACGCTGTGGTCAC < 41bp 0.785176247966711 0.510190622287037 0.30187893 0.24110767 prediction 0.549971251359349 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133494392 chr3:133494394 nonsynonymous SNV 0.818 4 23 hm5C_associated_SNPs_58879 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr3:133494380-133494400
64251 chr19 2813238 2813238 1 + G T UCEC 2813236 + 2813216 2813256 41 TCCTCCTGAGCAAGGGGCTGCAGGTCGGGGGCTGCGAGCCC TCCTCCTGAGCAAGGGGCTGCATGTCGGGGGCTGCGAGCCC < 41bp 0.774982168487386 0.444209124826905 0.84637415 0.3988812 prediction 0.549964336974771 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2813236 chr19:2813238 nonsynonymous SNV 0.844 0 23 hm5C_associated_SNPs_58880 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:2813212-2813238
64251 chr1 203830805 203830805 1 + G T LUAD 203830802 + 203830782 203830822 41 TCCACCATGGCGTACCGTGGCCAGGGTCAGAAAGTGCAGAA TCCACCATGGCGTACCGTGGCCATGGTCAGAAAGTGCAGAA < 41bp 0.774964533903078 0.464175265097015 0.88557804 0.3329206 prediction 0.549929067806156 Functional Loss - SNRPE ENSG00000182004 CDS Human protein_coding chr1:203830802 chr1:203830805 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_58881 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:203830760-203830820
64251 chr4 88929246 88929246 1 + G T rs371898195 88929243 + 88929223 88929263 41 AGATGGACGTAGAGTGGCGCCCGGGCAGCCGGAGGTCGGCC AGATGGACGTAGAGTGGCGCCCGTGCAGCCGGAGGTCGGCC < 41bp 0.774951886549466 0.393376588208668 0.5523437 0.38954902 prediction 0.549903773098931 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88929243 chr4:88929246 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_58885 1 0 2 PPIG POSTAR2 ENCODE chr4:88929220-88929288
64251 chr10 75557153 75557153 1 + G T UCEC 75557151 + 75557131 75557171 41 TTAGGCATGGCCAGCATTGACAGCAGTGCCCCTGAAACAAC TTAGGCATGGCCAGCATTGACATCAGTGCCCCTGAAACAAC < 41bp 0.832182108363148 0.557258683788139 0.31704646 0.11128187 prediction 0.549846849150018 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557151 chr10:75557153 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_58890 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:75557153-75557175
64251 chr3 10953792 10953792 1 + A T UCEC 10953788 + 10953768 10953808 41 CCTACAGGTCTGGGTAGATGCTGGAACGCAGATCTTTTTCT CCTACAGGTCTGGGTAGATGCTGGTACGCAGATCTTTTTCT < 41bp 0.819847027858918 0.544929767184203 0.5619292 0.3097564 prediction 0.549834521349428 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10953788 chr3:10953792 synonymous SNV . 0 25 hm5C_associated_SNPs_58891 0 0 1 SND1 POSTAR2 ENCODE chr3:10953774-10953798
64251 chr20 48500447 48500447 1 + G T BLCA 48500445 + 48500425 48500465 41 ACCTGGAGCCCATGGAGAAGCGGCAGCTCATCGGCACCACC ACCTGGAGCCCATGGAGAAGCGTCAGCTCATCGGCACCACC < 41bp 0.868104660465834 0.593190191312337 0.57556033 0.17237619 prediction 0.549828938306994 Functional Loss - SLC9A8 ENSG00000197818 CDS Human protein_coding chr20:48500445 chr20:48500447 synonymous SNV . 0 23 hm5C_associated_SNPs_58893 0 0 1 SRSF1 POSTAR2 ENCODE chr20:48500386-48500466
64251 chr7 56067016 56067016 1 + G C rs4689 56067012 + 56066992 56067032 41 TTGTCCAGTATACCTTATAACACTGAGCCACTTCTCCCCAC TTGTCCAGTATACCTTATAACACTCAGCCACTTCTCCCCAC < 41bp 0.785864043410759 0.510949882305308 0.15455875 0.032521248 prediction 0.549828322210902 Functional Loss - NIPSNAP2 ENSG00000146729 UTR3 Human protein_coding chr7:56067012 chr7:56067016 . . 0 25 hm5C_associated_SNPs_58894 0 0 14 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:56066994-56067016
64251 chr2 70506626 70506626 1 + G T rs117059146 70506624 + 70506604 70506644 41 ACTTATAATACCAATTTAGGCTGGGCGCAGTGGCTCACGCC ACTTATAATACCAATTTAGGCTTGGCGCAGTGGCTCACGCC < 41bp 0.817473863035973 0.542566122940307 0.54765165 0.28699392 prediction 0.549815480191332 Functional Loss - PCYOX1 ENSG00000116005 UTR3 Human protein_coding chr2:70506624 chr2:70506626 . . 0 23 hm5C_associated_SNPs_58896 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:70506592-70506628
64251 chr12 132425982 132425982 1 + G T UCEC 132425980 + 132425960 132426000 41 GCCTGAGCGCCGAGACGCTGCAGCAGGTCAACAGGCTCCTG GCCTGAGCGCCGAGACGCTGCATCAGGTCAACAGGCTCCTG < 41bp 0.868209547729285 0.593307553436158 0.83444244 0.24070632 prediction 0.549803988586254 Functional Loss - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132425980 chr12:132425982 nonsynonymous SNV 0.071 0 23 hm5C_associated_SNPs_58899 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:132425977-132426005
64251 chr9 38396115 38396115 1 + A C UCEC 38396111 + 38396091 38396131 41 CGAGTCTACTTGGCCTCACTCGAGACCTTGGACAATGGGAA CGAGTCTACTTGGCCTCACTCGAGCCCTTGGACAATGGGAA < 41bp 0.774892629341493 0.373988991751382 0.91990733 0.9224073 prediction 0.549785258682985 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396111 chr9:38396115 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_58901 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:38396094-38396120
64251 chr9 133761605 133761605 1 + G C rs540368205 133761604 + 133761584 133761624 41 CATTTCGGGAAGGGCATGCACGGGCATGCACACGGCTGGTC CATTTCGGGAAGGGCATGCACCGGCATGCACACGGCTGGTC < 41bp 0.774890489919332 0.482845857839348 0.8916121 0.7937261 prediction 0.549780979838665 Functional Loss - ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133761604 chr9:133761605 . . 0 22 hm5C_associated_SNPs_58903 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133761571-133761636
64251 chr4 38699643 38699643 1 + G C rs541172401 38699639 + 38699619 38699659 41 AGCAGAAGAGGCAATTCCTCCTGGGCTAGGGGTTGTCAGTG AGCAGAAGAGGCAATTCCTCCTGGCCTAGGGGTTGTCAGTG < 41bp 0.795092733041515 0.520210227175764 0.8473214 0.45328256 prediction 0.549765011731503 Functional Loss - KLF3 ENSG00000109787 UTR3 Human protein_coding chr4:38699639 chr4:38699643 . . 0 25 hm5C_associated_SNPs_58905 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:38699623-38699653
64251 chr2 101591324 101591324 1 + G T STAD 101591321 + 101591301 101591341 41 AACACACTCGACGTGGGTGCCTCGGGCCTTAATACCAGTCA AACACACTCGACGTGGGTGCCTCTGGCCTTAATACCAGTCA < 41bp 0.774872008162256 0.392403757541069 0.31085104 0.21912438 prediction 0.549744016324512 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101591321 chr2:101591324 synonymous SNV . 0 24 hm5C_associated_SNPs_58908 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101591274-101591328
64251 chr1 43240973 43240973 1 + G T UCEC 43240970 + 43240950 43240990 41 CGTATGAGGACATTGAGAAGCAAGATGCTAAAATCAGCATG CGTATGAGGACATTGAGAAGCAATATGCTAAAATCAGCATG < 41bp 0.871004462665657 0.596138623957179 0.70044446 0.31593764 prediction 0.549731677416957 Functional Loss - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43240970 chr1:43240973 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_58909 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:43240952-43240977
64251 chr10 131964859 131964859 1 + G T LUAD 131964857 + 131964837 131964877 41 TCTCAGATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCC TCTCAGATGAAGAGGTTCGACATGGACTCAAAGCCTATTCC < 41bp 0.861013364037791 0.586153954647738 0.8975557 0.34593964 prediction 0.549718818780107 Functional Loss - GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131964857 chr10:131964859 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_58910 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:131964816-131964892
64251 chr19 35512502 35512502 1 + C T HNSC 35512500 + 35512480 35512520 41 GCGGCATTGAAGACTATTTCCACCATCTGGGTAGGGACAGA GCGGCATTGAAGACTATTTCCATCATCTGGGTAGGGACAGA < 41bp 0.774855055449797 0.498580813103799 0.028029263 0.10767847 prediction 0.549710110899595 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512500 chr19:35512502 synonymous SNV . 0 23 hm5C_associated_SNPs_58914 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:35512469-35512504
64251 chr11 45832455 45832455 1 + G T SARC 45832453 + 45832433 45832473 41 CTACACCACGAAGGTGCTCCCGGCGGTGGACGGCAGCATCT CTACACCACGAAGGTGCTCCCGTCGGTGGACGGCAGCATCT < 41bp 0.857588124760023 0.582736354075817 0.9024414 0.3551803 prediction 0.549703541368413 Functional Loss - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832453 chr11:45832455 nonsynonymous SNV 0.292 1 23 hm5C_associated_SNPs_58916 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:45832448-45832496
64251 chr5 134002605 134002605 1 + C T SKCM 134002603 + 134002583 134002623 41 CCCTCCAGCTGGAGGCCCACCCCCAGTGAGGGCCCTCACGC CCCTCCAGCTGGAGGCCCACCCTCAGTGAGGGCCCTCACGC < 41bp 0.792346191653985 0.517499313998146 0.061843216 0.04385695 prediction 0.549693755311678 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134002603 chr5:134002605 nonsynonymous SNV 0.098 0 23 hm5C_associated_SNPs_58917 0 0 7 IGF2BP1 POSTAR2 ENCODE chr5:134002588-134002637
64251 chr14 75359643 75359643 1 + G C BLCA 75359639 + 75359619 75359659 41 CCCTGCAGCACCCATACCCACTCAGATGCCACCGGTGCCCT CCCTGCAGCACCCATACCCACTCACATGCCACCGGTGCCCT < 41bp 0.774826753738544 0.494614964524815 0.016706973 0.019357264 prediction 0.549653507477089 Functional Loss - DLST ENSG00000119689 CDS Human protein_coding chr14:75359639 chr14:75359643 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_58921 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:75359614-75359643
64251 chr11 130010312 130010312 1 + G T LUAD 130010310 + 130010290 130010330 41 CAGGATCTGGAGTGGGAGAGCAGGATGGGGGACTGATCGGT CAGGATCTGGAGTGGGAGAGCATGATGGGGGACTGATCGGT < 41bp 0.86098673983345 0.586184088894669 0.91509664 0.63030064 prediction 0.549605301877562 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:130010310 chr11:130010312 nonsynonymous SNV 0.978 2 23 hm5C_associated_SNPs_58924 0 0 30 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:130010280-130010320
64251 chr17 38296815 38296815 1 + G C SKCM 38296811 + 38296791 38296831 41 TTCTCCGTAAGATGGCGGACCGGCGGCGGCAGCGCGCTTCG TTCTCCGTAAGATGGCGGACCGGCCGCGGCAGCGCGCTTCG < 41bp 0.795439400342027 0.520641275432199 0.87166345 0.16048223 prediction 0.549596249819657 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38296811 chr17:38296815 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_58925 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:38296802-38296827
64251 chr6 41757003 41757003 1 + G C UCEC 41757002 + 41756982 41757022 41 AAATTTGGGACTCTTTGCTGCGGGAGTTTGGCTGGCCAGGA AAATTTGGGACTCTTTGCTGCCGGAGTTTGGCTGGCCAGGA < 41bp 0.793753634133799 0.518956293862987 0.9326743 0.90784836 prediction 0.549594680541625 Functional Loss - TOMM6 ENSG00000214736 CDS Human protein_coding chr6:41757002 chr6:41757003 synonymous SNV . 0 22 hm5C_associated_SNPs_58926 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:41757003-41757027
64251 chr17 15602924 15602924 1 + G C rs72819895 15602920 + 15602900 15602940 41 TCCGATTCTCCCAGCCGCACCACGGGTGCTCCCACCTGCGG TCCGATTCTCCCAGCCGCACCACGCGTGCTCCCACCTGCGG < 41bp 0.77479228882849 0.499330314625162 0.8148151 0.21882069 prediction 0.54958457765698 Functional Loss - ZNF286A ENSG00000187607 UTR5 Human protein_coding chr17:15602920 chr17:15602924 . . 0 25 hm5C_associated_SNPs_58927 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:15602887-15602925
64251 chr7 128441260 128441260 1 + G T HNSC 128441257 + 128441237 128441277 41 CAGGTGAGCTGCGTTCTCTACGGGAGGAGATTTCCCTGTTA CAGGTGAGCTGCGTTCTCTACGGTAGGAGATTTCCCTGTTA < 41bp 0.904678990179245 0.629894019922783 0.9001675 0.63097715 prediction 0.549569940512925 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128441257 chr7:128441260 stopgain 0.976 1 24 hm5C_associated_SNPs_58929 0 0 2 UCHL5 POSTAR2 ENCODE chr7:128441256-128441358
64251 chr13 27844693 27844693 1 + A C rs7331765 27844689 + 27844669 27844709 41 CTGCGGGGCGAGGAGACTCGCAGAATGCCTGACTAGAGGCC CTGCGGGGCGAGGAGACTCGCAGACTGCCTGACTAGAGGCC < 41bp 0.86462040784047 0.589843278240899 0.85171235 0.7691202 prediction 0.549554259199143 Functional Loss - RASL11A ENSG00000122035 UTR5 Human protein_coding chr13:27844689 chr13:27844693 . . 0 25 hm5C_associated_SNPs_58930 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:27844693-27844762
64251 chr16 2011659 2011659 1 + A C COAD 2011655 + 2011635 2011675 41 GCTGTGCGTGCCCCACCCACCCCCAACCCCCCACCATCCTC GCTGTGCGTGCCCCACCCACCCCCCACCCCCCACCATCCTC < 41bp 0.774770879794137 0.369428815134214 0.12542921 0.089074045 prediction 0.549541759588273 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011655 chr16:2011659 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_58933 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr18 48591909 48591909 1 + G T LUAD 48591907 + 48591887 48591927 41 TGATGGATACGTGGACCCTTCTGGAGGAGATCGCTTTTGTT TGATGGATACGTGGACCCTTCTTGAGGAGATCGCTTTTGTT < 41bp 0.847658773278537 0.572905005957577 0.29544157 0.10508853 prediction 0.54950753464192 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48591907 chr18:48591909 stopgain 0.998 1 23 hm5C_associated_SNPs_58938 1 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:48591853-48591914
64251 chr2 27293055 27293055 1 + G T UCEC 27293053 + 27293033 27293073 41 TCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCA TCCCCATCCTGGAATTGTTACATCAGGGGTCCCTTGGGCCA < 41bp 0.774749409269047 0.443077990305639 0.6076038 0.3944951 prediction 0.549498818538095 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27293053 chr2:27293055 nonsynonymous SNV 0.970 0 23 hm5C_associated_SNPs_58939 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27293053-27293084
64251 chr17 61769725 61769725 1 + G T LUAD 61769723 + 61769703 61769743 41 TCCGTCACTGGCACACCCTACTGGATGAGCCCTGAGGTGAT TCCGTCACTGGCACACCCTACTTGATGAGCCCTGAGGTGAT < 41bp 0.854204143823421 0.579465881561673 0.17863446 0.034627676 prediction 0.549476524523496 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61769723 chr17:61769725 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_58940 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:61769697-61769735
64251 chr20 25257937 25257937 1 + C T PRAD 25257935 + 25257915 25257955 41 CGGAACTTGGCTGAGAACATCTCCAGGGTCCTGTATCCAAA CGGAACTTGGCTGAGAACATCTTCAGGGTCCTGTATCCAAA < 41bp 0.774719596175047 0.481601847215072 0.9398562 0.10985941 prediction 0.549439192350093 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25257935 chr20:25257937 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_58943 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:25257919-25257957
64251 chr1 113197226 113197226 1 + G T PRAD 113197223 + 113197203 113197243 41 AGCAGATGGAGGTCTGAAGTCTTGGAGAGAATCCTGTGACA AGCAGATGGAGGTCTGAAGTCTTTGAGAGAATCCTGTGACA < 41bp 0.774708735619797 0.402691280440141 0.15399265 0.13755253 prediction 0.549417471239593 Functional Loss - CAPZA1 ENSG00000116489 CDS Human protein_coding chr1:113197223 chr1:113197226 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_58946 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:113197197-113197231
64251 chr15 72862610 72862610 1 + G T GBM 72862607 + 72862587 72862627 41 AATTGTAAAGCAGAGTTTTGCTGGGTGTGTCTTGGCCCATG AATTGTAAAGCAGAGTTTTGCTGTGTGTGTCTTGGCCCATG < 41bp 0.896099215123548 0.621412636963279 0.89631975 0.27806282 prediction 0.549373156320538 Functional Loss - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72862607 chr15:72862610 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_58949 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:72862574-72862633
64251 chr21 45108104 45108104 1 + G T SARC 45108102 + 45108082 45108122 41 CGGGGTGCTGGAGTCCGAAGCTGGGCAACCCCAGGCTCTGG CGGGGTGCTGGAGTCCGAAGCTTGGCAACCCCAGGCTCTGG < 41bp 0.774683976977251 0.42847128804588 0.70449233 0.11115843 prediction 0.549367953954503 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45108102 chr21:45108104 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_58950 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45108047-45108107
64251 chr7 37989942 37989942 1 + C T COAD 37989940 + 37989920 37989960 41 AGACCCCTCGGTGTTTACCCCTCCAAGCACGTGCCAGATGG AGACCCCTCGGTGTTTACCCCTTCAAGCACGTGCCAGATGG < 41bp 0.793516981589014 0.518840075843276 0.9743113 0.82710814 prediction 0.549353811491475 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37989940 chr7:37989942 nonsynonymous SNV 0.959 4 23 hm5C_associated_SNPs_58953 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:37989919-37989955
64251 chr17 43185466 43185466 1 + G T rs142546587 43185463 + 43185443 43185483 41 GCGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGA GCGCCATGGCTGTCTCAAACCAATCAAAGGAAGGACCCTGA < 41bp 0.774662043317574 0.437154653697752 0.21740237 0.073535234 prediction 0.549324086635148 Functional Loss - NMT1 ENSG00000136448 UTR3 Human protein_coding chr17:43185463 chr17:43185466 . . 0 24 hm5C_associated_SNPs_58954 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr17:43185445-43185466
64251 chr12 57957930 57957930 1 + C T UCEC 57957928 + 57957908 57957948 41 TCAGCTGATGGGAATCATTCCTCGAATTGCCCGAGACATCT TCAGCTGATGGGAATCATTCCTTGAATTGCCCGAGACATCT < 41bp 0.788120717160058 0.513463112115094 0.50482607 0.047360033 prediction 0.549315210089929 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57957928 chr12:57957930 stopgain 0.998 1 23 hm5C_associated_SNPs_58956 0 0 1 DDX24 POSTAR2 ENCODE chr12:57957930-57957980
64251 chr14 100173937 100173937 1 + G T LUSC 100173935 + 100173915 100173955 41 GGATGGAGACCAGTATGCTGCTGGGTGCCCAGAAGCCTCTG GGATGGAGACCAGTATGCTGCTTGGTGCCCAGAAGCCTCTG < 41bp 0.864551280188733 0.589902821719362 0.77037466 0.24756482 prediction 0.549296916938742 Functional Loss - CYP46A1 ENSG00000036530 CDS Human protein_coding chr14:100173935 chr14:100173937 synonymous SNV . 0 23 hm5C_associated_SNPs_58957 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:100173935-100173973
64251 chr3 101476690 101476690 1 + C T SKCM 101476688 + 101476668 101476708 41 GCCAGTTGCATCAGGACTGTCTCCACTATCACCTACAGTTG GCCAGTTGCATCAGGACTGTCTTCACTATCACCTACAGTTG < 41bp 0.806034103366228 0.531388474950554 0.9267229 0.09398326 prediction 0.549291256831348 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101476688 chr3:101476690 nonsynonymous SNV 0.760 4 23 hm5C_associated_SNPs_58958 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:101476629-101476704
64251 chr14 29237307 29237307 1 + G T LUAD 29237305 + 29237285 29237325 41 GCGGCACCACGGGCAAGCTGCGGCGCCGCTCCACCACCTCG GCGGCACCACGGGCAAGCTGCGTCGCCGCTCCACCACCTCG < 41bp 0.878711940909753 0.604091511134233 0.78855747 0.1718823 prediction 0.54924085955104 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237305 chr14:29237307 synonymous SNV . 0 23 hm5C_associated_SNPs_58965 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:29237299-29237313
64251 chr15 40226472 40226472 1 + G T LUAD 40226469 + 40226449 40226489 41 GCTACCCGCAACGACAGGACCACGAGCTACAGGCCCTGGAG GCTACCCGCAACGACAGGACCACTAGCTACAGGCCCTGGAG < 41bp 0.888754834852551 0.614148414472568 0.24203664 0.09818521 prediction 0.549212840759966 Functional Loss - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40226469 chr15:40226472 stopgain 1.000 1 24 hm5C_associated_SNPs_58968 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:40226460-40226480
64251 chr20 46256410 46256410 1 + C T SKCM 46256408 + 46256388 46256428 41 GATATTCTGGAAGACATAAACGCCAGTCCTGAAATGCGCCA GATATTCTGGAAGACATAAACGTCAGTCCTGAAATGCGCCA < 41bp 0.774604127883565 0.494272137391142 0.45894325 0.31577185 prediction 0.549208255767129 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46256408 chr20:46256410 nonsynonymous SNV 0.671 0 23 hm5C_associated_SNPs_58969 0 0 4 DDX24 POSTAR2 ENCODE chr20:46256343-46256496
64251 chr22 29439389 29439389 1 + C T COAD 29439387 + 29439367 29439407 41 CGTCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACC CGTCAACAAGCAGAAAGTGGCTTGAGCAAGGATCCAGCACC < 41bp 0.781250299406646 0.506648875341579 0.120559275 0.05418983 prediction 0.549202848130135 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29439387 chr22:29439389 stopgain 0.996 1 23 hm5C_associated_SNPs_58970 0 0 4 EFTUD2 POSTAR2 ENCODE chr22:29439379-29439476
64251 chr16 847886 847886 1 + G T UCEC 847884 + 847864 847904 41 AGTGGAGCGGCGCATGGGCACAGCGGTGGGCAGGAGCGAGG AGTGGAGCGGCGCATGGGCACATCGGTGGGCAGGAGCGAGG < 41bp 0.857749464275804 0.583162478507885 0.64115584 0.39043167 prediction 0.549173971535838 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847884 chr16:847886 nonsynonymous SNV 0.002 4 23 hm5C_associated_SNPs_58971 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:847870-847901
64251 chr11 47008816 47008816 1 + G T UCEC 47008814 + 47008794 47008834 41 GTGTGCCAGCTGCTAGAAAACAGGGAAGATATTAGCCAATA GTGTGCCAGCTGCTAGAAAACATGGAAGATATTAGCCAATA < 41bp 0.849967970746083 0.575390868220054 0.8801623 0.30279112 prediction 0.549154205052058 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47008814 chr11:47008816 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_58974 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:47008800-47008838
64251 chr19 10221814 10221814 1 + G T LUAD 10221812 + 10221792 10221832 41 ATGGTGGGCGAGGCCGGGGCCGGGGCCGCCCAGGGAAGAGA ATGGTGGGCGAGGCCGGGGCCGTGGCCGCCCAGGGAAGAGA < 41bp 0.862320251037496 0.587747417596247 0.91099095 0.8618015 prediction 0.549145666882499 Functional Loss - PPAN ENSG00000130810 CDS Human protein_coding chr19:10221812 chr19:10221814 synonymous SNV . 0 23 hm5C_associated_SNPs_58975 0 0 17 AARS POSTAR2 ENCODE chr19:10221776-10221889
64251 chr10 64565351 64565351 1 + G T COAD 64565349 + 64565329 64565369 41 GCGTTCGCGGGCCGAGTACACCGAGGCCAGCGGCCCCTGCA GCGTTCGCGGGCCGAGTACACCTAGGCCAGCGGCCCCTGCA < 41bp 0.87517777671585 0.600607817810187 0.90245557 0.6198034 prediction 0.549139917811326 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64565349 chr10:64565351 stopgain 0.992 0 23 hm5C_associated_SNPs_58976 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr10:64565350-64565351
64251 chr1 168037639 168037639 1 + C T UCEC 168037637 + 168037617 168037657 41 ATGCTGGAAGAAACTAGAAACACCATTACAGTTCCAGCCTC ATGCTGGAAGAAACTAGAAACATCATTACAGTTCCAGCCTC < 41bp 0.774550965713579 0.491631657974776 0.05503151 0.086678594 prediction 0.549101931427159 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168037637 chr1:168037639 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_58981 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:168037600-168037640
64251 chr15 43692416 43692416 1 + C T PAAD 43692414 + 43692394 43692434 41 TGGATAATCTTCAGTACTATCTCCAGGTCTGTGCTAAGAGA TGGATAATCTTCAGTACTATCTTCAGGTCTGTGCTAAGAGA < 41bp 0.79950028110868 0.524949884769614 0.92552507 0.25911695 prediction 0.549100792678132 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43692414 chr15:43692416 synonymous SNV . 0 23 hm5C_associated_SNPs_58982 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr15:43692396-43692419
64251 chr17 4442824 4442824 1 - T A KIRC 4442828 - 4442808 4442848 41 AAAGGGGGTCTTGGGCAAATCACCACTGTCCGCGCTGGCAC AAAGGGGGTCTTGGGCAAATCACCTCTGTCCGCGCTGGCAC < 41bp 0.840974655975783 0.566464383810174 0.79279315 0.28884056 prediction 0.549020544331218 Functional Loss - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4442828 chr17:4442824 synonymous SNV . 0 25 hm5C_associated_SNPs_58988 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:4442820-4442840
64251 chr7 156742746 156742746 1 + A C rs376182769 156742742 + 156742722 156742762 41 GCTGCAGAGGACGGCGGGCCCCGAACAGGGTCCCGGCCTGG GCTGCAGAGGACGGCGGGCCCCGACCAGGGTCCCGGCCTGG < 41bp 0.893998548580297 0.619492501091225 0.102133244 0.10719365 prediction 0.549012094978144 Functional Loss - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156742742 chr7:156742746 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_58989 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:156742746-156742747
64251 chr3 17052040 17052040 1 + C T SKCM 17052038 + 17052018 17052058 41 GGTCAGGAAAAGGGCTGGCTCTCCATAGACGGGTTCACTAA GGTCAGGAAAAGGGCTGGCTCTTCATAGACGGGTTCACTAA < 41bp 0.798551882102352 0.524058018397325 0.96305114 0.42816666 prediction 0.548987727410053 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17052038 chr3:17052040 nonsynonymous SNV 0.778 4 23 hm5C_associated_SNPs_58992 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:17052003-17052045
64251 chr17 45730222 45730222 1 + C T UCEC 45730220 + 45730200 45730240 41 GCTTGCTATTGATGCTAATGCTCGACGAGAAGTCAAGAACT GCTTGCTATTGATGCTAATGCTTGACGAGAAGTCAAGAACT < 41bp 0.780272364842283 0.505809868235716 0.21958753 0.24896395 prediction 0.548924993213136 Functional Loss - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45730220 chr17:45730222 stopgain 1.000 1 23 hm5C_associated_SNPs_58997 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr17:45730194-45730222
64251 chr1 38158437 38158437 1 + G T THYM 38158435 + 38158415 38158455 41 GGCGGAAGCTCGCCTCCTTTCTGAAAGACTTCGACCGTGAA GGCGGAAGCTCGCCTCCTTTCTTAAAGACTTCGACCGTGAA < 41bp 0.863728266976454 0.589266457245724 0.64612496 0.15992215 prediction 0.54892361946146 Functional Loss - CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38158435 chr1:38158437 synonymous SNV . 0 23 hm5C_associated_SNPs_58998 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:38158422-38158447
64251 chr12 93968660 93968660 1 + A C UCEC 93968656 + 93968636 93968676 41 CTAATCTTCGAATCGAATACCAAGACGGAAAATTCAGATTG CTAATCTTCGAATCGAATACCAAGCCGGAAAATTCAGATTG < 41bp 0.774436803736533 0.417135915149289 0.21739215 0.05683306 prediction 0.548873607473066 Functional Loss - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93968656 chr12:93968660 nonsynonymous SNV 0.985 1 25 hm5C_associated_SNPs_59004 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr12:93968640-93968660
64251 chr16 19710899 19710899 1 + A C SKCM 19710895 + 19710875 19710915 41 GCCCATGGGGACCTACGCAACAACAAGCTCAACCAGCTCTC GCCCATGGGGACCTACGCAACAACCAGCTCAACCAGCTCTC < 41bp 0.774393143565048 0.355348525862241 0.027056038 0.04026586 prediction 0.548786287130095 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19710895 chr16:19710899 nonsynonymous SNV 0.980 1 25 hm5C_associated_SNPs_59011 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:19710885-19710923
64251 chr14 68114822 68114822 1 + C T BLCA 68114820 + 68114800 68114840 41 TGCATTTGACCCTACACTGGCTCCAGCCACAGGAACTCCTG TGCATTTGACCCTACACTGGCTTCAGCCACAGGAACTCCTG < 41bp 0.774385458489179 0.478708686299395 0.47139105 0.18550172 prediction 0.548770916978359 Functional Loss - ARG2 ENSG00000081181 CDS Human protein_coding chr14:68114820 chr14:68114822 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59012 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:68114805-68114840
64251 chr6 160212129 160212129 1 + G C OV 160212128 + 160212108 160212148 41 GAAAGAGCGGGGCTGGCGGACGGTGTTTCCCTCCCGTGAGT GAAAGAGCGGGGCTGGCGGACCGTGTTTCCCTCCCGTGAGT < 41bp 0.774377215134916 0.472642533191599 0.5784615 0.22932291 prediction 0.548754430269832 Functional Loss - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212128 chr6:160212129 synonymous SNV . 0 22 hm5C_associated_SNPs_59014 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:160212120-160212140
64251 chr4 39482830 39482830 1 + A C STAD 39482826 + 39482806 39482846 41 ACTACAGCAAGGGGAAGTGCCTGAAGACATACACTGGCCAC ACTACAGCAAGGGGAAGTGCCTGACGACATACACTGGCCAC < 41bp 0.894123333482778 0.619749049942287 0.21928006 0.10655451 prediction 0.548748567080982 Functional Loss - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482826 chr4:39482830 . . 0 25 hm5C_associated_SNPs_59015 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704218 chr4:39482823-39482844
64251 chr3 50252882 50252882 1 + G T LGG 50252880 + 50252860 50252900 41 CCACCTGCTACTCAAGTCCTCAGGGGTCGTGGGTGAGCCTC CCACCTGCTACTCAAGTCCTCATGGGTCGTGGGTGAGCCTC < 41bp 0.8814664859656 0.607197446185755 0.95002687 0.8477266 prediction 0.54853807955969 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50252880 chr3:50252882 . 0.995 2 23 hm5C_associated_SNPs_59030 0 0 2 PPIG POSTAR2 ENCODE chr3:50252876-50252892
64251 chr9 37486042 37486042 1 + G C rs147983938 37486041 + 37486021 37486061 41 GTGCTTGGCGGACAGACAGGCGAGATGGCGGCGGAGGTGTT GTGCTTGGCGGACAGACAGGCCAGATGGCGGCGGAGGTGTT < 41bp 0.806726621675233 0.532484746279692 0.7341372 0.3802246 prediction 0.548483750791082 Functional Loss - POLR1E ENSG00000137054 UTR5 Human protein_coding chr9:37486041 chr9:37486042 . . 0 22 hm5C_associated_SNPs_59034 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:37486035-37486067
64251 chr1 60294516 60294516 1 + A C CESC 60294512 + 60294492 60294532 41 AAAGAGGATGTTGGGGACAACTGGAGAATAAAGGTATGCAG AAAGAGGATGTTGGGGACAACTGGCGAATAAAGGTATGCAG < 41bp 0.90643484462129 0.632195981735809 0.8387997 0.7721791 prediction 0.548477725770961 Functional Loss - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60294512 chr1:60294516 synonymous SNV . 0 25 hm5C_associated_SNPs_59035 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:60294474-60294516
64251 chr15 90996086 90996086 1 + C T COAD 90996084 + 90996064 90996104 41 CTGTTTTGGAACTGATGAATCCCGAAGCCCAGCTGCCCCAG CTGTTTTGGAACTGATGAATCCTGAAGCCCAGCTGCCCCAG < 41bp 0.774231446908977 0.496064751009625 0.78281754 0.22559652 prediction 0.548462893817954 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:90996084 chr15:90996086 synonymous SNV . 0 23 hm5C_associated_SNPs_59038 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90996042-90996088
64251 chr18 14179557 14179557 1 + G C rs142779176 14179556 + 14179536 14179576 41 AGATGGAGCGCTGTCTGGCGCGCAGGAGCGGAGACCTTGAC AGATGGAGCGCTGTCTGGCGCCCAGGAGCGGAGACCTTGAC < 41bp 0.793003177431183 0.518782346060041 0.33193073 0.08007446 prediction 0.548441662742282 Functional Loss - ANKRD20A5P ENSG00000186481 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr18:14179556 chr18:14179557 . . 0 22 hm5C_associated_SNPs_59040 0 0 4 PPIG POSTAR2 ENCODE chr18:14179534-14179594
64251 chr9 116021039 116021039 1 + C T UCEC 116021037 + 116021017 116021057 41 CTATGAAGGACTCAAGATAGCCCGAGAGAGCCTGCTGCGTA CTATGAAGGACTCAAGATAGCCTGAGAGAGCCTGCTGCGTA < 41bp 0.774180613840751 0.496340453516357 0.12616563 0.23803228 prediction 0.548361227681502 Functional Loss - SLC31A1 ENSG00000136868 CDS Human protein_coding chr9:116021037 chr9:116021039 stopgain 1.000 1 23 hm5C_associated_SNPs_59045 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:116021016-116021039
64251 chr19 57796025 57796025 1 + G T HNSC 57796023 + 57796003 57796043 41 GTGGAGGTGATGCTGGAGACCTGTGGGCTTCTGGTCGCACT GTGGAGGTGATGCTGGAGACCTTTGGGCTTCTGGTCGCACT < 41bp 0.77417418521794 0.432477346084866 0.2779048 0.2629731 prediction 0.54834837043588 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57796023 chr19:57796025 nonsynonymous SNV 0.789 0 23 hm5C_associated_SNPs_59046 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57795951-57796036
64251 chr5 256514 256514 1 + G C THCA 256513 + 256493 256533 41 GGCTGACTGTGCCACCGTCCCGCCAGCCATTCGCTCCTACT GGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACT < 41bp 0.818473258624184 0.544312394664949 0.17957914 0.119767725 prediction 0.54832172791847 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:256513 chr5:256514 synonymous SNV . 0 22 hm5C_associated_SNPs_59049 3 0 9 FUS POSTAR2 DRA001158,DRS012384 chr5:256497-256542
64251 chr22 18572700 18572700 1 + A C rs146739242 18572696 + 18572676 18572716 41 GCCGGGATGGTCTCGATCTCCTGAACTTGTGATCCACCCAC GCCGGGATGGTCTCGATCTCCTGACCTTGTGATCCACCCAC < 41bp 0.774127162953733 0.413926557673952 0.25306246 0.124580026 prediction 0.548254325907465 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18572696 chr22:18572700 . . 0 25 hm5C_associated_SNPs_59050 1 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:18572688-18572724
64251 chr3 39431045 39431045 1 + C T SKCM 39431043 + 39431023 39431063 41 TCAGTGGGACCTGCTCTACCCTCCTTTTCCAACCTCTGGAT TCAGTGGGACCTGCTCTACCCTTCTTTTCCAACCTCTGGAT < 41bp 0.780261037570359 0.506134730631641 0.028642178 0.049603254 prediction 0.548252613877436 Functional Loss - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431043 chr3:39431045 synonymous SNV . 0 23 hm5C_associated_SNPs_59051 0 0 1 YBX3 POSTAR2 ENCODE chr3:39431003-39431060
64251 chr12 107349810 107349810 1 + G T rs11837205 107349807 + 107349787 107349827 41 GCGCCGGCCCGCTCACTCCGCCCGGCCCCAGCCCTAGCGCT GCGCCGGCCCGCTCACTCCGCCCTGCCCCAGCCCTAGCGCT < 41bp 0.801505911520591 0.52738434988283 0.1908103 0.07560751 prediction 0.548243123275522 Functional Loss - TMEM263 ENSG00000151135 UTR5 Human protein_coding chr12:107349807 chr12:107349810 . . 0 24 hm5C_associated_SNPs_59052 0 0 10 EIF3A POSTAR2 GSE65004,GSM1585665 chr12:107349777-107349810
64251 chr15 74326943 74326943 1 + G T SARC 74326941 + 74326921 74326961 41 GGTCCCAGGGGGCACAGCCACAGCAGGTGACTCTCAGACTT GGTCCCAGGGGGCACAGCCACATCAGGTGACTCTCAGACTT < 41bp 0.795068629148914 0.520949941497844 0.87272084 0.36132488 prediction 0.54823737530214 Functional Loss - PML ENSG00000140464 CDS Human protein_coding chr15:74326941 chr15:74326943 nonsynonymous SNV 0.630 0 23 hm5C_associated_SNPs_59055 0 0 1 RBM15 POSTAR2 ENCODE chr15:74326912-74326958
64251 chr19 3527673 3527673 1 + C T SKCM 3527671 + 3527651 3527691 41 CGGAAACCCACCCGCAAGATCTCCAAGATCCCCTTCAAGGT CGGAAACCCACCCGCAAGATCTTCAAGATCCCCTTCAAGGT < 41bp 0.774233169245279 0.500123188840033 0.96218514 0.12781179 prediction 0.548219960810493 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3527671 chr19:3527673 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_59058 0 0 1 DDX24 POSTAR2 ENCODE chr19:3527628-3527681
64251 chr7 106685448 106685448 1 + G T rs75385144 106685445 + 106685425 106685465 41 CCCGCGGACCTGCTGGAGTTCGCGCTGCAGCACTTCACCCG CCCGCGGACCTGCTGGAGTTCGCTCTGCAGCACTTCACCCG < 41bp 0.892124757557989 0.618036681306309 0.64364994 0.38083366 prediction 0.548176152503359 Functional Loss - PRKAR2B ENSG00000005249 CDS Human protein_coding chr7:106685445 chr7:106685448 synonymous SNV . 0 24 hm5C_associated_SNPs_59060 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:106685442-106685467
64251 chr5 177378780 177378780 1 + G T rs182949407 177378777 + 177378757 177378797 41 CTGTGAGGAGGACACGGCTCCTGGGTGGACCCTGCAGATTG CTGTGAGGAGGACACGGCTCCTGTGTGGACCCTGCAGATTG < 41bp 0.774078911088278 0.410107157676355 0.39026234 0.021059006 prediction 0.548157822176556 Functional Loss - LOC728554;PROP1 ENSG00000249684 ncRNA_exonic Human antisense chr5:177378777 chr5:177378780 . . 0 24 hm5C_associated_SNPs_59061 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:177378752-177378794
64251 chr3 127379981 127379981 1 + G T LUAD 127379978 + 127379958 127379998 41 CAGGCAGCTGAAGCTCAATCCAGGATACCCTGGGATTCTAC CAGGCAGCTGAAGCTCAATCCAGTATACCCTGGGATTCTAC < 41bp 0.774073444805674 0.386870470402437 0.8311873 0.29542732 prediction 0.548146889611349 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379978 chr3:127379981 nonsynonymous SNV 0.106 0 24 hm5C_associated_SNPs_59063 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:127379962-127379984
64251 chr1 63991310 63991310 1 + C T UCEC 63991308 + 63991288 63991328 41 ATCAACACCTTCAGAGAGTCCTCGAACAAAGAAATTTCCAC ATCAACACCTTCAGAGAGTCCTTGAACAAAGAAATTTCCAC < 41bp 0.787543652471681 0.513485697146823 0.54710656 0.053153604 prediction 0.548115910649716 Functional Loss - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:63991308 chr1:63991310 stopgain 0.996 0 23 hm5C_associated_SNPs_59070 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:63991283-63991314
64251 chr6 126243897 126243897 1 + G C BRCA 126243896 + 126243876 126243916 41 GCCTATAGCACGTTAGAGCACGGGACCAGCTTAAAGACGCT GCCTATAGCACGTTAGAGCACCGGACCAGCTTAAAGACGCT < 41bp 0.774055052121199 0.481574596216431 0.67692655 0.21783528 prediction 0.548110104242397 Functional Loss - NCOA7 ENSG00000111912 CDS Human protein_coding chr6:126243896 chr6:126243897 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_59072 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:126243880-126243905
64251 chr3 101576282 101576282 1 + C T SKCM 101576280 + 101576260 101576300 41 AACAGCCAGTGCATTTGGTTCCCGATGGCCCTGTGGGAGAA AACAGCCAGTGCATTTGGTTCCTGATGGCCCTGTGGGAGAA < 41bp 0.790623068791338 0.516586828954128 0.24194449 0.23100242 prediction 0.548072479674419 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101576280 chr3:101576282 synonymous SNV . 0 23 hm5C_associated_SNPs_59075 0 0 1 PPIG POSTAR2 ENCODE chr3:101576252-101576309
64251 chr4 100532356 100532356 1 + C T SKCM 100532354 + 100532334 100532374 41 GCTCACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTTC GCTCACAATTATGACCGTTTCTTCAGGAGTGGATCTTCTTC < 41bp 0.812788971604264 0.53876820480673 0.9528699 0.09695926 prediction 0.548041533595068 Functional Loss - MTTP ENSG00000138823 CDS Human protein_coding chr4:100532354 chr4:100532356 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_59076 0 0 2 SND1 POSTAR2 ENCODE chr4:100532340-100532391
64251 chr16 72045969 72045969 1 + G C LUSC 72045965 + 72045945 72045985 41 GCAGAAGCGGGCCCAGGATGCTGTGATCATCCTGGGGGGAG GCAGAAGCGGGCCCAGGATGCTGTCATCATCCTGGGGGGAG < 41bp 0.77401590777849 0.489823292500182 0.23960611 0.1468823 prediction 0.548031815556981 Functional Loss - DHODH ENSG00000102967 CDS Human protein_coding chr16:72045965 chr16:72045969 synonymous SNV . 0 25 hm5C_associated_SNPs_59078 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr16:72045969-72045970
64251 chr6 131148775 131148775 1 + G T SARC 131148772 + 131148752 131148792 41 CTCCTCCTCATCGCCTACTTCAGGATCAAACTGATTGAGGG CTCCTCCTCATCGCCTACTTCAGTATCAAACTGATTGAGGG < 41bp 0.895561917916593 0.621547461318519 0.4370058 0.17103031 prediction 0.548028913196148 Functional Loss - SMLR1 ENSG00000256162 CDS Human protein_coding chr6:131148772 chr6:131148775 nonsynonymous SNV 0.954 1 24 hm5C_associated_SNPs_59079 0 0 7 EFTUD2 POSTAR2 ENCODE chr6:131148736-131148849
64251 chr14 101198417 101198417 1 + A C rs6575799 101198413 + 101198393 101198433 41 TCCTCGGCCCCCTGTGCCAACAACAGGACCTGCGTGAGCCT TCCTCGGCCCCCTGTGCCAACAACCGGACCTGCGTGAGCCT < 41bp 0.774007304484162 0.360371183218193 0.34828138 0.20555335 prediction 0.548014608968325 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101198413 chr14:101198417 synonymous SNV . 0 25 hm5C_associated_SNPs_59080 0 0 14 DDX3X POSTAR2 ENCODE chr14:101198380-101198438
64251 chr11 120322392 120322392 1 + G T UCEC 120322389 + 120322369 120322409 41 TTCCATGTCTTCTGTAGCTTCAGGGGCCTCTTTTTCCCAGG TTCCATGTCTTCTGTAGCTTCAGTGGCCTCTTTTTCCCAGG < 41bp 0.773992725522571 0.390737543354586 0.90924066 0.20697337 prediction 0.547985451045142 Functional Loss - ARHGEF12 ENSG00000196914 CDS Human protein_coding chr11:120322389 chr11:120322392 nonsynonymous SNV 0.604 2 24 hm5C_associated_SNPs_59081 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr11:120322369-120322396
64251 chr19 44564659 44564659 1 + G T LUAD 44564656 + 44564636 44564676 41 TGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCTTGCC TGGTCTTCACTGAGGAGGAGCTGTGGCTGCTGGACCTTGCC < 41bp 0.773983564244459 0.373150763583613 0.85780895 0.6411807 prediction 0.547967128488918 Functional Loss - ZNF223 ENSG00000178386;ENSG00000267022 CDS Human other chr19:44564656 chr19:44564659 nonsynonymous SNV 0.984 3 24 hm5C_associated_SNPs_59083 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:44564640-44564660
64251 chr19 44564658 44564658 1 + G T SKCM 44564656 + 44564636 44564676 41 TGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCTTGCC TGGTCTTCACTGAGGAGGAGCTTGGGCTGCTGGACCTTGCC < 41bp 0.773983564244459 0.42933411373267 0.85780895 0.7746448 prediction 0.547967128488918 Functional Loss - ZNF223 ENSG00000178386;ENSG00000267022 CDS Human other chr19:44564656 chr19:44564658 synonymous SNV . 0 23 hm5C_associated_SNPs_59084 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:44564640-44564660
64251 chr11 7324413 7324413 1 + G T PRAD 7324410 + 7324390 7324430 41 CTGGTAGCAAAGACAACAACCAGGAGCCCCTTAACTACATG CTGGTAGCAAAGACAACAACCAGTAGCCCCTTAACTACATG < 41bp 0.773982910598072 0.397766446244869 0.29404712 0.038805097 prediction 0.547965821196143 Functional Loss - SYT9 ENSG00000170743 CDS Human protein_coding chr11:7324410 chr11:7324413 stopgain 1.000 1 24 hm5C_associated_SNPs_59085 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:7324406-7324444
64251 chr19 35741411 35741411 1 + C T READ 35741409 + 35741389 35741429 41 CGGCCAGCGTCGACAACCAGCTCAATGCCCAGCTGGCAGCC CGGCCAGCGTCGACAACCAGCTTAATGCCCAGCTGGCAGCC < 41bp 0.775105616994677 0.501123227149979 0.64471185 0.13749713 prediction 0.547964779689396 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35741409 chr19:35741411 synonymous SNV . 0 23 hm5C_associated_SNPs_59086 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr17 57682819 57682819 1 + G T SKCM 57682816 + 57682796 57682836 41 GTTTTGTATAGCTTCATGAACAGGAAACCAAACTTGAATGG GTTTTGTATAGCTTCATGAACAGTAAACCAAACTTGAATGG < 41bp 0.773980814980984 0.403141511512961 0.6125197 0.24736318 prediction 0.547961629961969 Functional Loss - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57682816 chr17:57682819 stopgain 1.000 1 24 hm5C_associated_SNPs_59087 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:57682813-57682845
64251 chr17 38320179 38320179 1 + C T SKCM 38320177 + 38320157 38320197 41 CTATTCCCGGGCAAGAAGAACTCGAACCAAAGTTGGAGATG CTATTCCCGGGCAAGAAGAACTTGAACCAAAGTTGGAGATG < 41bp 0.789232888315558 0.515259811410345 0.546846 0.19489309 prediction 0.547946153810426 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320177 chr17:38320179 stopgain 0.953 1 23 hm5C_associated_SNPs_59089 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320134-38320195
64251 chr22 21800937 21800937 1 + G T BLCA 21800935 + 21800915 21800955 41 GGAGCACATGCGTGTGCACTCGGGCGAGAAACCTTACGAGT GGAGCACATGCGTGTGCACTCGTGCGAGAAACCTTACGAGT < 41bp 0.773973041190591 0.443117939901558 0.9367162 0.4319251 prediction 0.547946082381182 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800935 chr22:21800937 nonsynonymous SNV 0.937 4 23 hm5C_associated_SNPs_59090 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr22:21800916-21800937
64251 chr5 230999 230999 1 + G T COAD 230997 + 230977 231017 41 TCTATTGTTTCCAGAGGCTACGGGCGCACCTACTTCAGCTG TCTATTGTTTCCAGAGGCTACGTGCGCACCTACTTCAGCTG < 41bp 0.773965044419052 0.423567633636576 0.846591 0.1061258 prediction 0.547930088838104 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:230997 chr5:230999 nonsynonymous SNV 0.968 3 23 hm5C_associated_SNPs_59093 0 0 3 DDX24 POSTAR2 ENCODE chr5:230984-231032
64251 chr9 123921207 123921207 1 + C T SKCM 123921205 + 123921185 123921225 41 AAAAGGAGGAGCTGCATCTACTCCAAGGAAGCATGGTCCAG AAAAGGAGGAGCTGCATCTACTTCAAGGAAGCATGGTCCAG < 41bp 0.773958051375837 0.491280948387574 0.9565666 0.20510116 prediction 0.547916102751673 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123921205 chr9:123921207 synonymous SNV . 0 23 hm5C_associated_SNPs_59094 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:123921181-123921211
64251 chr17 21731078 21731078 1 + A T LUSC 21731074 + 21731054 21731094 41 TCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCAGTCTT TCATCTTTGCAGGCAAGCAGCTGGTAGATGGCCGCAGTCTT < 41bp 0.826384255854348 0.552428566066139 0.8806428 0.8809242 prediction 0.547911379576419 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731074 chr17:21731078 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_59096 0 0 6 METAP2 POSTAR2 ENCODE chr17:21731061-21731096
64251 chr17 79009096 79009096 1 + A C UCEC 79009092 + 79009072 79009112 41 AGAGGAGATGCACCGGCTCACGGAAAATGTCTATAAGGTGA AGAGGAGATGCACCGGCTCACGGACAATGTCTATAAGGTGA < 41bp 0.773928843390548 0.414496450439202 0.8126714 0.3013336 prediction 0.547857686781096 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79009092 chr17:79009096 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_59102 0 0 2 NCBP2 POSTAR2 ENCODE chr17:79008948-79009096
64251 chr15 40476080 40476080 1 + C T CESC 40476078 + 40476058 40476098 41 TCATCCGTGTAGGAGGTGCTCTCAAGGGTAAGTTTGTTAAA TCATCCGTGTAGGAGGTGCTCTTAAGGGTAAGTTTGTTAAA < 41bp 0.773923823131381 0.492344101147776 0.03695026 0.03847146 prediction 0.547847646262762 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40476078 chr15:40476080 synonymous SNV . 0 23 hm5C_associated_SNPs_59103 0 0 3 PRPF8 POSTAR2 ENCODE chr15:40476068-40476104
64251 chr2 231248247 231248247 1 + G T HNSC 231248244 + 231248224 231248264 41 GGAAAAAAGAAGGGGCATGGCTGGAGCAGAATGGGAACGAG GGAAAAAAGAAGGGGCATGGCTGTAGCAGAATGGGAACGAG < 41bp 0.898329783019353 0.624422771967245 0.28124106 0.1131151 prediction 0.547814022104215 Functional Loss - SP140L ENSG00000185404 CDS Human protein_coding chr2:231248244 chr2:231248247 nonsynonymous SNV 0.008 2 24 hm5C_associated_SNPs_59104 0 0 7 BUD13 POSTAR2 ENCODE chr2:231248224-231248291
64251 chr17 41338374 41338374 1 + G T COAD 41338371 + 41338351 41338391 41 GGAGCAAAACGACTAGCTGCCAGGGCAGGGAAGAAGCCACT GGAGCAAAACGACTAGCTGCCAGTGCAGGGAAGAAGCCACT < 41bp 0.773902569682947 0.381873893458317 0.7948062 0.069105595 prediction 0.547805139365894 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41338371 chr17:41338374 nonsynonymous SNV 0.895 1 24 hm5C_associated_SNPs_59106 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:41338358-41338390
64251 chr20 25259060 25259060 1 + G T BLCA 25259057 + 25259037 25259077 41 AGTCGTCCAAGTTCGGCTGCCGGGACCCTGTGAGAACCTGT AGTCGTCCAAGTTCGGCTGCCGGTACCCTGTGAGAACCTGT < 41bp 0.773898517592834 0.380840740009787 0.55470496 0.13067415 prediction 0.547797035185669 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25259057 chr20:25259060 nonsynonymous SNV 0.957 3 24 hm5C_associated_SNPs_59107 0 0 1 TARBP2 POSTAR2 GSE49648,GSM1204358 chr20:25259040-25259060
64251 chrX 140995387 140995387 1 + G T STAD 140995384 + 140995364 140995404 41 ACTTTCCTCAGTTTCCTCCTCAGGGGGAGGACTTCCAGTCT ACTTTCCTCAGTTTCCTCCTCAGTGGGAGGACTTCCAGTCT < 41bp 0.912287484633436 0.638397837162754 0.95344025 0.88144 prediction 0.547779294941364 Functional Loss - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995384 chrX:140995387 nonsynonymous SNV 0.010 3 24 hm5C_associated_SNPs_59110 0 0 2 PTBP1 POSTAR2 ENCODE chrX:140995299-140995416
64251 chr17 29281564 29281564 1 + G T UCEC 29281561 + 29281541 29281581 41 GAGCGGAGGCTGCTCTATTACAAGAACCCACTGGTAAGAGC GAGCGGAGGCTGCTCTATTACAATAACCCACTGGTAAGAGC < 41bp 0.900034219895904 0.626144652399216 0.69384277 0.22674781 prediction 0.547779134993376 Functional Loss - ADAP2 ENSG00000184060 CDS Human protein_coding chr17:29281561 chr17:29281564 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59111 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:29281549-29281573
64251 chr6 2770577 2770577 1 + G T UCEC 2770575 + 2770555 2770595 41 CCCACTGACCCTCTGAGCCACAGCAGCAACAGCAGCTCAGA CCCACTGACCCTCTGAGCCACATCAGCAACAGCAGCTCAGA < 41bp 0.773873988770658 0.430144798562816 0.14611393 0.06458688 prediction 0.547747977541316 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2770575 chr6:2770577 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_59114 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:2770541-2770577
64251 chr3 52525405 52525405 1 + G T LGG 52525403 + 52525383 52525423 41 AGGTGGTCACGTGCTTGACGCGGGACAGCTACCTGACGCAC AGGTGGTCACGTGCTTGACGCGTGACAGCTACCTGACGCAC < 41bp 0.865937610541186 0.592067782489716 0.9017761 0.34729826 prediction 0.54773965610294 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52525403 chr3:52525405 synonymous SNV . 0 23 hm5C_associated_SNPs_59115 0 0 1 BUD13 POSTAR2 ENCODE chr3:52525365-52525407
64251 chr16 19083370 19083370 1 + G T LUAD 19083368 + 19083348 19083388 41 GCAGGCGAATATGGAGCAAACCGCATCTATGCCGGGCAGAT GCAGGCGAATATGGAGCAAACCTCATCTATGCCGGGCAGAT < 41bp 0.77385953485414 0.4387146889169 0.24879685 0.1758509 prediction 0.547719069708279 Functional Loss - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19083368 chr16:19083370 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_59117 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:19083354-19083388
64251 chr4 20620538 20620538 1 + G C BLCA 20620537 + 20620517 20620557 41 GTGGACCGCTGAGGAGCAAGCGGCGGAAATACTCTTTCGAA GTGGACCGCTGAGGAGCAAGCCGCGGAAATACTCTTTCGAA < 41bp 0.793208213104852 0.519391257743079 0.9311063 0.72994745 prediction 0.547633910723546 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20620537 chr4:20620538 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_59125 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr4:20620519-20620540
64251 chr6 43144302 43144302 1 + G T OV 43144300 + 43144280 43144320 41 TTGCAGGTGGGGCAGTGGCCCAGCAGGTCCCAGTGCAGGCC TTGCAGGTGGGGCAGTGGCCCATCAGGTCCCAGTGCAGGCC < 41bp 0.858689480237006 0.584884108450456 0.14041072 0.04840699 prediction 0.5476107435731 Functional Loss - SRF ENSG00000112658 CDS Human protein_coding chr6:43144300 chr6:43144302 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59128 0 0 1 BUD13 POSTAR2 ENCODE chr6:43144220-43144303
64251 chr16 1544301 1544301 1 + G C rs2667660 1544297 + 1544277 1544317 41 TGCAGGATGGAGCCAGCACCCTCAGAGGTTCGACTCGCCGT TGCAGGATGGAGCCAGCACCCTCACAGGTTCGACTCGCCGT < 41bp 0.784532754707568 0.510738359040618 0.050945163 0.05950862 prediction 0.5475887913339 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1544297 chr16:1544301 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_59130 0 0 2 DDX3X POSTAR2 ENCODE chr16:1544246-1544332
64251 chr6 44376337 44376337 1 + C T STAD 44376335 + 44376315 44376355 41 CAGCGTTGCTCTTAGAACACCACGAACACCAGCTTCCCAGG CAGCGTTGCTCTTAGAACACCATGAACACCAGCTTCCCAGG < 41bp 0.788342350409641 0.514554501508928 0.11997229 0.044275254 prediction 0.547575697801426 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44376335 chr6:44376337 stopgain 0.957 1 23 hm5C_associated_SNPs_59131 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44376185-44376360
64251 chr17 7158024 7158024 1 + C T COAD 7158022 + 7158002 7158042 41 AGGACAGATCCTGTTCCTGTCACCATTGCTCTCGATTCACT AGGACAGATCCTGTTCCTGTCATCATTGCTCTCGATTCACT < 41bp 0.781519502190619 0.507743137686115 0.2930243 0.39281422 prediction 0.547552729009008 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7158022 chr17:7158024 nonsynonymous SNV 0.987 3 23 hm5C_associated_SNPs_59132 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7157993-7158036
64251 chr10 75532234 75532234 1 + G T LUAD 75532232 + 75532212 75532252 41 CCGTGGGATGGCGCGGTTTTCCGGCCGCCCTCGGCGCTGGG CCGTGGGATGGCGCGGTTTTCCTGCCGCCCTCGGCGCTGGG < 41bp 0.773766916183359 0.415837159402473 0.9096842 0.5912996 prediction 0.547533832366719 Functional Loss - FUT11 ENSG00000196968;ENSG00000267964 CDS Human other chr10:75532232 chr10:75532234 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_59135 0 0 2 DDX3X POSTAR2 ENCODE chr10:75532101-75532243
64251 chr6 27114944 27114944 1 + G T HNSC 27114941 + 27114921 27114961 41 GCAAGCAAGGCGGTAAAGCTCGCGCCAAGGCCAAGACCCGC GCAAGCAAGGCGGTAAAGCTCGCTCCAAGGCCAAGACCCGC < 41bp 0.891803565360083 0.618045268351072 0.8520081 0.6795934 prediction 0.547516594018021 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114941 chr6:27114944 nonsynonymous SNV 0.695 1 24 hm5C_associated_SNPs_59137 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr19 11018765 11018765 1 + G T BLCA 11018762 + 11018742 11018782 41 AAACCTGCCGGGGCCACACCCTGGAGCGGTCTGTGTTCAGC AAACCTGCCGGGGCCACACCCTGTAGCGGTCTGTGTTCAGC < 41bp 0.902341303606469 0.628584753441197 0.87249374 0.2505848 prediction 0.547513100330543 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11018762 chr19:11018765 stopgain 0.981 1 24 hm5C_associated_SNPs_59138 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11018758-11018779
64251 chr1 64059284 64059284 1 + G C COAD 64059280 + 64059260 64059300 41 ACTACGCGGAGAACTTCATCCAGAGTATCATCTCCACCGTG ACTACGCGGAGAACTTCATCCAGACTATCATCTCCACCGTG < 41bp 0.773734335761245 0.487715188808412 0.6363735 0.27417326 prediction 0.547468671522489 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64059280 chr1:64059284 nonsynonymous SNV 0.991 2 25 hm5C_associated_SNPs_59144 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:64059260-64059300
64251 chr9 131468080 131468080 1 + G T COAD 131468077 + 131468057 131468097 41 GCTCGGCACCTAGAGGCTCTCCGGAGGCAGCTGCATGTGGA GCTCGGCACCTAGAGGCTCTCCGTAGGCAGCTGCATGTGGA < 41bp 0.900131366412661 0.626406960866741 0.91614854 0.7621147 prediction 0.547448811091841 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131468077 chr9:131468080 synonymous SNV . 0 24 hm5C_associated_SNPs_59146 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr9:131468080-131468100
64251 chr7 23240136 23240136 1 + G C HNSC 23240135 + 23240115 23240155 41 TGTGGCTGGTTTTGGTAGTCCGGGCTCACATTCTCACACTG TGTGGCTGGTTTTGGTAGTCCCGGCTCACATTCTCACACTG < 41bp 0.814739182439654 0.541024718907309 0.79872346 0.32826623 prediction 0.547428927064691 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23240135 chr7:23240136 synonymous SNV . 0 22 hm5C_associated_SNPs_59148 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:23240120-23240140
64251 chr7 36445887 36445887 1 + A T LUAD 36445883 + 36445863 36445903 41 GCTTTCAAATGCCTCGGCAACTCCAGTTGGCAGAAGGGGCC GCTTTCAAATGCCTCGGCAACTCCTGTTGGCAGAAGGGGCC < 41bp 0.8790224351568 0.60531061203836 0.9130757 0.24566182 prediction 0.547423646236879 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36445883 chr7:36445887 synonymous SNV . 0 25 hm5C_associated_SNPs_59149 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr15 64717779 64717779 1 + G T LUAD 64717777 + 64717757 64717797 41 ACTATCCGTCAGGTTGTCTTCTGGGCTGTGTGGACCTAATT ACTATCCGTCAGGTTGTCTTCTTGGCTGTGTGGACCTAATT < 41bp 0.773689837121849 0.445324206540195 0.6606574 0.09894958 prediction 0.547379674243699 Functional Loss - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64717777 chr15:64717779 synonymous SNV . 0 23 hm5C_associated_SNPs_59155 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:64717775-64717792
64251 chr3 45637385 45637385 1 + G T PAAD 45637383 + 45637363 45637403 41 TGGACCCCCAACCCTGGTTCCAGGATGGGCCCAAATCTTAC TGGACCCCCAACCCTGGTTCCATGATGGGCCCAAATCTTAC < 41bp 0.773687021466246 0.435009216784481 0.65970397 0.12399623 prediction 0.547374042932492 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637383 chr3:45637385 nonsynonymous SNV 0.707 0 23 hm5C_associated_SNPs_59156 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:45637380-45637460
64251 chr1 45101302 45101302 1 + G T UCEC 45101300 + 45101280 45101320 41 GCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTG GCCCCCTGGCAGGATCGGAGCATGAGATGAGTAGGCATGTG < 41bp 0.860830070183327 0.587166574569491 0.8960843 0.49042526 prediction 0.547326991227672 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101300 chr1:45101302 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_59162 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:45101279-45101315
64251 chr18 9533742 9533742 1 + C T SKCM 9533740 + 9533720 9533760 41 AGTGAGACTGAGGAGTACTCCTCCGAGAGCGAGAGCGAGAG AGTGAGACTGAGGAGTACTCCTTCGAGAGCGAGAGCGAGAG < 41bp 0.793088719323056 0.519427785158507 0.33477718 0.1783688 prediction 0.547321868329098 Functional Loss - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9533740 chr18:9533742 nonsynonymous SNV 0.413 4 23 hm5C_associated_SNPs_59163 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr18:9533742-9533743
64251 chr2 241500794 241500794 1 + G T HNSC 241500791 + 241500771 241500811 41 GCAGAACCGAACCCGGGCTTCTGGTCTCAGCTCCAGAAGTA GCAGAACCGAACCCGGGCTTCTGTTCTCAGCTCCAGAAGTA < 41bp 0.773656453368637 0.389192357177485 0.27044427 0.26085454 prediction 0.547312906737275 Functional Loss - DUSP28 ENSG00000188542 CDS Human protein_coding chr2:241500791 chr2:241500794 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_59164 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:241500779-241500801
64251 chr19 2813150 2813150 1 + G T LUAD 2813148 + 2813128 2813168 41 AGAAGCTGCATCCTGAGACCCGGCGGTTCCGAGGATGCCAG AGAAGCTGCATCCTGAGACCCGTCGGTTCCGAGGATGCCAG < 41bp 0.860604729142623 0.587000544568353 0.8513961 0.19938019 prediction 0.547208369148539 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2813148 chr19:2813150 nonsynonymous SNV 0.626 4 23 hm5C_associated_SNPs_59170 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:2813130-2813164
64251 chr20 19870273 19870273 1 + G T OV 19870270 + 19870250 19870290 41 CAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGA CAGCTTGGACCATGGGCGCCCGCTGTCTGGACAAGCGAGGA < 41bp 0.773602368987937 0.38331578869688 0.18469322 0.068861455 prediction 0.547204737975874 Functional Loss - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19870270 chr20:19870273 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_59171 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:19870257-19870425
64251 chr9 82334988 82334988 1 + A T OV 82334984 + 82334964 82335004 41 AGGGATAACTACATCCGTTCCTGCAGATTGCTCCCTGATGG AGGGATAACTACATCCGTTCCTGCTGATTGCTCCCTGATGG < 41bp 0.773583829204175 0.441034813791212 0.42355484 0.24805033 prediction 0.547167658408349 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82334984 chr9:82334988 stopgain 1.000 1 25 hm5C_associated_SNPs_59176 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:82334974-82335013
64251 chr1 22903298 22903298 1 + G C CESC 22903294 + 22903274 22903314 41 ACACCCAAGATGTACTGCAGCGCGGAGGGCGAGTGGCTCGT ACACCCAAGATGTACTGCAGCGCGCAGGGCGAGTGGCTCGT < 41bp 0.773579489132939 0.499215034156093 0.2651288 0.17019653 prediction 0.547158978265877 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22903294 chr1:22903298 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_59177 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:22903280-22903318
64251 chrX 40440283 40440283 1 + G C rs111632930 40440282 + 40440262 40440302 41 CGTGTCCCGCCGGCCCGTTCCGTGTCGCCCCGCAGTGCTGC CGTGTCCCGCCGGCCCGTTCCCTGTCGCCCCGCAGTGCTGC < 41bp 0.773577397993055 0.488550156344442 0.17520678 0.025587678 prediction 0.54715479598611 Functional Loss - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40440282 chrX:40440283 nonsynonymous SNV 0.040 0 22 hm5C_associated_SNPs_59178 1 0 17 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:40440200-40440320
64251 chr7 98984412 98984412 1 + G T UCEC 98984410 + 98984390 98984430 41 GGAGCACAACGGGCAGGTGACAGGTATGTCAGGGTGGCTGG GGAGCACAACGGGCAGGTGACATGTATGTCAGGGTGGCTGG < 41bp 0.880369064551692 0.606792058872678 0.75685394 0.40163618 prediction 0.547154011358029 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98984410 chr7:98984412 nonsynonymous SNV 0.916 3 23 hm5C_associated_SNPs_59180 0 0 6 PPIG POSTAR2 ENCODE chr7:98984345-98984413
64251 chr12 57180950 57180950 1 + A C COAD 57180946 + 57180926 57180966 41 GAAGGGCTGTTGAATTGTAGCACAAACCTGAACCTGGTCAC GAAGGGCTGTTGAATTGTAGCACACACCTGAACCTGGTCAC < 41bp 0.773564214506557 0.384406034356691 0.01853329 0.01644504 prediction 0.547128429013114 Functional Loss - HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57180946 chr12:57180950 nonsynonymous SNV 0.962 2 25 hm5C_associated_SNPs_59188 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:57180946-57180981
64251 chr3 49060541 49060541 1 + G T BLCA 49060538 + 49060518 49060558 41 GTGTCATGAAGGCCGAGTAACTGGAGCTGCTCTCATCCCTC GTGTCATGAAGGCCGAGTAACTGTAGCTGCTCTCATCCCTC < 41bp 0.861455463240619 0.58790695436534 0.90144974 0.4731363 prediction 0.547097017750558 Functional Loss - NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060538 chr3:49060541 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_59189 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:49060470-49060552
64251 chr19 47865850 47865850 1 + G C BLCA 47865846 + 47865826 47865866 41 GCCGGGCGGGCCGCACGGGCCCCGGAGTCTGCTTCCGCCTC GCCGGGCGGGCCGCACGGGCCCCGCAGTCTGCTTCCGCCTC < 41bp 0.773545630293619 0.491892827677919 0.41834077 0.08855766 prediction 0.547091260587239 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47865846 chr19:47865850 nonsynonymous SNV 0.361 4 25 hm5C_associated_SNPs_59190 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47865844-47865881
64251 chr13 99992707 99992707 1 + G T UCEC 99992705 + 99992685 99992725 41 TCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCAC TCAGAACCCACCAGCGAAGCCATAATTGGGATGGGAGCCAC < 41bp 0.852556587511587 0.57903056970049 0.3445113 0.22727722 prediction 0.547052035622193 Functional Loss - UBAC2 ENSG00000134882 CDS Human protein_coding chr13:99992705 chr13:99992707 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_59194 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr13:99992707-99992732
64251 chr11 7335113 7335113 1 + G T LUSC 7335110 + 7335090 7335130 41 AAGTGGTGGTGGATCACTTCCTAGACTTGGCTGATTTCCCC AAGTGGTGGTGGATCACTTCCTATACTTGGCTGATTTCCCC < 41bp 0.773524524662224 0.412563105410577 0.23724559 0.1837543 prediction 0.547049049324448 Functional Loss - SYT9 ENSG00000170743 CDS Human protein_coding chr11:7335110 chr11:7335113 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_59196 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr11:7335101-7335135
64251 chr5 138160275 138160275 1 + G T STAD 138160273 + 138160253 138160293 41 CTGCAGCTAGAGGAATCCTGCAGAAGAACGTTCCGATCCTC CTGCAGCTAGAGGAATCCTGCATAAGAACGTTCCGATCCTC < 41bp 0.773465026514351 0.437967729361555 0.6386059 0.16153124 prediction 0.546930053028702 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138160273 chr5:138160275 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_59206 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:138160246-138160284
64251 chr1 150266814 150266814 1 + A T LIHC 150266810 + 150266790 150266830 41 GCAAAACATCTGAAGTTCATCGCCAGGACTGTGATGGTACA GCAAAACATCTGAAGTTCATCGCCTGGACTGTGATGGTACA < 41bp 0.846217316678936 0.572752342645506 0.33557504 0.21858352 prediction 0.54692994806686 Functional Loss - MRPS21 ENSG00000187145 CDS Human other chr1:150266810 chr1:150266814 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_59207 0 0 12 UPF1 POSTAR2 GSE69586,GSM1704215 chr1:150266800-150266820
64251 chr6 35260388 35260388 1 + C T LUSC 35260386 + 35260366 35260406 41 GGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCA GGGAAACGCTTCACCGAGTACTTGAGCTTGTATAAGCACCA < 41bp 0.78809452923659 0.514631301688422 0.23484164 0.15177116 prediction 0.546926455096338 Functional Loss - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35260386 chr6:35260388 nonsynonymous SNV 0.861 3 23 hm5C_associated_SNPs_59208 0 0 2 GRWD1 POSTAR2 ENCODE chr6:35260360-35260396
64251 chr22 39911144 39911144 1 + G T rs76044976 39911141 + 39911121 39911161 41 CTGCTCGTCATCTGTGGCTGCAGGGGTCAGACAGACAAGGA CTGCTCGTCATCTGTGGCTGCAGTGGTCAGACAGACAAGGA < 41bp 0.773462112594909 0.400872626654415 0.8599999 0.57968295 prediction 0.546924225189818 Functional Loss - MIEF1 ENSG00000100335 UTR3 Human protein_coding chr22:39911141 chr22:39911144 . . 0 24 hm5C_associated_SNPs_59209 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr22:39911133-39911154
64251 chr7 77379031 77379031 1 + C T STAD 77379029 + 77379009 77379049 41 ATTTGTCTCATTAAAGGAGCCACGAGTTCAGAATAACCTCA ATTTGTCTCATTAAAGGAGCCATGAGTTCAGAATAACCTCA < 41bp 0.781555074662594 0.50809613479308 0.08723202 0.07869071 prediction 0.546917879739028 Functional Loss - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77379029 chr7:77379031 stopgain 0.996 1 23 hm5C_associated_SNPs_59210 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:77379022-77379086
64251 chr7 44802527 44802527 1 + G T LUAD 44802524 + 44802504 44802544 41 GTGCACCGCCCATCCGTCCGCTCGGTGCTGCAGGGCCTCCT GTGCACCGCCCATCCGTCCGCTCTGTGCTGCAGGGCCTCCT < 41bp 0.773450346614255 0.385455319549504 0.20371452 0.20215428 prediction 0.546900693228511 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802524 chr7:44802527 synonymous SNV . 0 24 hm5C_associated_SNPs_59212 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44802519-44802543
64251 chr4 56883874 56883874 1 + C T BRCA 56883872 + 56883852 56883892 41 ATCAATGGCAAAAGCCATGTCTCGATTAGAAGAAGAGCTGA ATCAATGGCAAAAGCCATGTCTTGATTAGAAGAAGAGCTGA < 41bp 0.773446348918573 0.486641354407686 0.9086353 0.14098829 prediction 0.546892697837146 Functional Loss - CEP135 ENSG00000174799 CDS Human protein_coding chr4:56883872 chr4:56883874 stopgain 0.985 1 23 hm5C_associated_SNPs_59213 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:56883873-56883916
64251 chr2 99767229 99767229 1 + G T LUSC 99767227 + 99767207 99767247 41 GACTGGCACAGGATCTCTTTCTGGGAAAGCCTTGGGTTCAG GACTGGCACAGGATCTCTTTCTTGGAAAGCCTTGGGTTCAG < 41bp 0.830012245216912 0.556576275555554 0.8630957 0.1960231 prediction 0.546871939322715 Functional Loss - C2orf15 ENSG00000273045 CDS Human protein_coding chr2:99767227 chr2:99767229 nonsynonymous SNV 0.282 1 23 hm5C_associated_SNPs_59214 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:99767199-99767231
64251 chr20 52835595 52835595 1 + G T KIRC 52835592 + 52835572 52835612 41 AGAAATTGACGCCTTAGAATCCAGAGTGGAATCAATTCAGC AGAAATTGACGCCTTAGAATCCATAGTGGAATCAATTCAGC < 41bp 0.773426447740872 0.427388703744899 0.1805827 0.06004873 prediction 0.546852895481744 Functional Loss - PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52835592 chr20:52835595 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_59217 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr20:52835560-52835685
64251 chr10 1034450 1034450 1 + G T HNSC 1034448 + 1034428 1034468 41 TTACAACTTCAAGAAAATTACGGTGGTGCCGTCCGCCAAGG TTACAACTTCAAGAAAATTACGTTGGTGCCGTCCGCCAAGG < 41bp 0.867216984530501 0.593819415562473 0.7726488 0.272767 prediction 0.546795137936058 Functional Loss - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1034448 chr10:1034450 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_59225 0 0 4 DDX3X POSTAR2 ENCODE chr10:1034433-1034468
64251 chr8 27361252 27361252 1 + C T BLCA 27361250 + 27361230 27361270 41 GAAAGATCAACCGCCCCATGCTCCAGGCAGCTCTCATGCTC GAAAGATCAACCGCCCCATGCTTCAGGCAGCTCTCATGCTC < 41bp 0.773357673205226 0.480824069064664 0.54384553 0.038994133 prediction 0.546715346410452 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27361250 chr8:27361252 synonymous SNV . 0 23 hm5C_associated_SNPs_59229 0 0 2 PPIG POSTAR2 ENCODE chr8:27361251-27361276
64251 chr3 38565654 38565654 1 + A C UCEC 38565650 + 38565630 38565670 41 CTGTGGACACCTGTAAGCTCCTGGATTTCCAGGAGTTCACC CTGTGGACACCTGTAAGCTCCTGGCTTTCCAGGAGTTCACC < 41bp 0.773357478451875 0.384961119865401 0.48338655 0.24764168 prediction 0.546714956903749 Functional Loss - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565650 chr3:38565654 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_59230 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38565534-38565655
64251 chr3 150127327 150127327 1 + G C LUSC 150127323 + 150127303 150127343 41 GATTATGGCCCTGAGGAGGTCTGCGAGCGCAGCTCTTCCGA GATTATGGCCCTGAGGAGGTCTGCCAGCGCAGCTCTTCCGA < 41bp 0.791702441234105 0.518353306482277 0.69360495 0.25719452 prediction 0.546698269503655 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127323 chr3:150127327 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_59232 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:150127303-150127329
64251 chr14 103571084 103571084 1 + G C CESC 103571083 + 103571063 103571103 41 CTTCGCTCGCAGCTCGTGGCCGAGCACGTGAAGGCGGCCGG CTTCGCTCGCAGCTCGTGGCCCAGCACGTGAAGGCGGCCGG < 41bp 0.814199925583761 0.540850998639295 0.80755824 0.40681827 prediction 0.546697853888932 Functional Loss - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103571083 chr14:103571084 nonsynonymous SNV 0.729 0 22 hm5C_associated_SNPs_59233 0 0 2 EFTUD2 POSTAR2 ENCODE chr14:103571011-103571102
64251 chr19 36128426 36128426 1 + G T UCEC 36128424 + 36128404 36128444 41 TGGACGTGGTCCGCAAGAAGCAGAAGGAAAAGAAGAAGCTG TGGACGTGGTCCGCAAGAAGCATAAGGAAAAGAAGAAGCTG < 41bp 0.857805645120258 0.584458014668413 0.8437059 0.36170664 prediction 0.54669526090369 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128424 chr19:36128426 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_59234 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36128369-36128428
64251 chr17 79633773 79633773 1 + G C rs182344335 79633772 + 79633752 79633792 41 CAGGAAGGCGGAAGTGGCTTCGCTAGGGAGCCTCCCGGCGT CAGGAAGGCGGAAGTGGCTTCCCTAGGGAGCCTCCCGGCGT < 41bp 0.773303279829509 0.498125210776563 0.26124918 0.17810127 prediction 0.546606559659019 Functional Loss - CCDC137 ENSG00000185298 UTR5 Human protein_coding chr17:79633772 chr17:79633773 . . 0 22 hm5C_associated_SNPs_59243 0 0 1 DDX3X POSTAR2 ENCODE chr17:79633770-79633834
64251 chrX 77359738 77359738 1 + G C rs782688735 77359737 + 77359717 77359757 41 GTGTGGGCCCTGTTCCTGCCCGCGCGGTGTTCCGCATTCTG GTGTGGGCCCTGTTCCTGCCCCCGCGGTGTTCCGCATTCTG < 41bp 0.773296335943152 0.485922674228597 0.33783805 0.2487087 prediction 0.546592671886304 Functional Loss - PGK1 ENSG00000102144 UTR5 Human protein_coding chrX:77359737 chrX:77359738 . . 0 22 hm5C_associated_SNPs_59244 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:77359720-77359820
64251 chr3 169985788 169985788 1 + G T ESCA 169985785 + 169985765 169985805 41 TTCCAAGCCAAGCGTTTCAACAGGGTAAACATAGTTTGTTG TTCCAAGCCAAGCGTTTCAACAGTGTAAACATAGTTTGTTG < 41bp 0.773265082767084 0.418179723880382 0.90689206 0.062146038 prediction 0.546530165534167 Functional Loss - PRKCI ENSG00000163558 CDS Human protein_coding chr3:169985785 chr3:169985788 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_59250 0 0 2 YBX3 POSTAR2 ENCODE chr3:169985776-169985789
64251 chr11 119155697 119155697 1 + C T LUSC 119155695 + 119155675 119155715 41 CTAGGTGGAACGGCCGCCTTCTCCATTCTCCATGGCCCCAC CTAGGTGGAACGGCCGCCTTCTTCATTCTCCATGGCCCCAC < 41bp 0.803472594140821 0.530208576425718 0.96010333 0.2001921 prediction 0.546528035430207 Functional Loss - CBL ENSG00000110395 CDS Human protein_coding chr11:119155695 chr11:119155697 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_59251 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:119155690-119155718
64251 chr22 45923784 45923784 1 + G C LUAD 45923780 + 45923760 45923800 41 GCCCAGGCCCAGGGCCAGAGCTGCGAGTACAGCCTCATGGT GCCCAGGCCCAGGGCCAGAGCTGCCAGTACAGCCTCATGGT < 41bp 0.810563753496399 0.537311426479187 0.51792985 0.2976827 prediction 0.546504654034423 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45923780 chr22:45923784 nonsynonymous SNV 0.129 4 25 hm5C_associated_SNPs_59254 0 0 3 RPS3 POSTAR2 ENCODE chr22:45923730-45923795
64251 chr11 43918868 43918868 1 + G T UCEC 43918865 + 43918845 43918885 41 CCCAGGCCCAGCCATTCTGACAAGAACTAGACTTTGGGCTC CCCAGGCCCAGCCATTCTGACAATAACTAGACTTTGGGCTC < 41bp 0.773237527892741 0.392215597730421 0.71461326 0.20248446 prediction 0.546475055785482 Functional Loss - SEC14L1P1 ENSG00000166199 CDS Human protein_coding chr11:43918865 chr11:43918868 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_59256 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:43918857-43918894
64251 chr14 74036534 74036534 1 + G C LUAD 74036533 + 74036513 74036553 41 ACTTCCTCCCGCCCGGGGTGCGGCGCGAGCCGGTGCGCGTG ACTTCCTCCCGCCCGGGGTGCCGCGCGAGCCGGTGCGCGTG < 41bp 0.812706182503727 0.539498192898514 0.84999824 0.58512944 prediction 0.546415979210426 Functional Loss - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74036533 chr14:74036534 nonsynonymous SNV 0.021 2 22 hm5C_associated_SNPs_59259 0 0 2 RPS3 POSTAR2 ENCODE chr14:74036517-74036558
64251 chr11 31453329 31453329 1 + A C rs142804437 31453325 + 31453305 31453345 41 GCCGAGGTTGTGCCACTGCACTGCAGCCTGGGCTACAGAGA GCCGAGGTTGTGCCACTGCACTGCCGCCTGGGCTACAGAGA < 41bp 0.77319944497334 0.41689403362274 0.19478637 0.10982424 prediction 0.546398889946681 Functional Loss - DNAJC24 ENSG00000170946 UTR3 Human protein_coding chr11:31453325 chr11:31453329 . . 0 25 hm5C_associated_SNPs_59260 0 0 2 UPF1 POSTAR2 ENCODE chr11:31453287-31453337
64251 chr14 31091521 31091521 1 + G T SARC 31091519 + 31091499 31091539 41 CCCCCCGCTCCGCTCCCCAGCCGGGCAGTGGCTCGTGGGAG CCCCCCGCTCCGCTCCCCAGCCTGGCAGTGGCTCGTGGGAG < 41bp 0.812275137767235 0.539078447339394 0.8009377 0.022955477 prediction 0.546393380855683 Functional Loss - SCFD1 ENSG00000092108 UTR5 Human protein_coding chr14:31091519 chr14:31091521 . . 0 23 hm5C_associated_SNPs_59261 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr14:31091520-31091540
64251 chr7 107399270 107399270 1 + C T UCEC 107399268 + 107399248 107399288 41 GGTATATAGCCAAGCTCCACCTCCACCAATGACCTCTGCTC GGTATATAGCCAAGCTCCACCTTCACCAATGACCTCTGCTC < 41bp 0.793466328889546 0.520277105581904 0.9275224 0.09376091 prediction 0.546378446615285 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399268 chr7:107399270 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_59263 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:107399212-107399331
64251 chr10 88718436 88718436 1 + A C rs1800373 88718432 + 88718412 88718452 41 CAGCTCCGTCCTGCCTGCAGCAGCACAACCCTGCACACCCA CAGCTCCGTCCTGCCTGCAGCAGCCCAACCCTGCACACCCA < 41bp 0.786733161925126 0.513565262616611 0.26473027 0.26613715 prediction 0.546335798617031 Functional Loss - SNCG ENSG00000173267 UTR5 Human protein_coding chr10:88718432 chr10:88718436 . . 0 25 hm5C_associated_SNPs_59271 0 0 1 DDX3X POSTAR2 ENCODE chr10:88718386-88718440
64251 chr1 198711064 198711064 1 + G C LGG 198711060 + 198711040 198711080 41 TTCACCAGCTGGCCAGACCACGGGGTGCCTGAGGATCCTCA TTCACCAGCTGGCCAGACCACGGGCTGCCTGAGGATCCTCA < 41bp 0.773156180011575 0.498561599863771 0.9037093 0.61793435 prediction 0.54631236002315 Functional Loss - PTPRC ENSG00000081237 CDS Human protein_coding chr1:198711060 chr1:198711064 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_59273 0 0 3 PUM2 POSTAR2 ENCODE chr1:198710996-198711083
64251 chr22 40757339 40757339 1 + G T SARC 40757337 + 40757317 40757357 41 TGGAGGAACCCTTTGAAAAACAGCAGATTGGTGAGTGCTGT TGGAGGAACCCTTTGAAAAACATCAGATTGGTGAGTGCTGT < 41bp 0.857934865999246 0.584786513586724 0.29927793 0.17042536 prediction 0.546296704825044 Functional Loss - ADSL ENSG00000239900 CDS Human protein_coding chr22:40757337 chr22:40757339 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_59274 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:40757299-40757346
64251 chr2 201436386 201436386 1 + G T LUSC 201436384 + 201436364 201436404 41 GGACAGAAAGATCTGATGTCCTGGATGGCAAAAGGGGTGCA GGACAGAAAGATCTGATGTCCTTGATGGCAAAAGGGGTGCA < 41bp 0.818024600446093 0.544891152498842 0.11172503 0.07795575 prediction 0.546266895894502 Functional Loss - SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436384 chr2:201436386 synonymous SNV . 0 23 hm5C_associated_SNPs_59277 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr2:201436378-201436405
64251 chr2 47637473 47637473 1 + G T LUAD 47637471 + 47637451 47637491 41 ACCAAAGGAATGTGTTTTACCCGGAGGAGAGACTGCTGGAG ACCAAAGGAATGTGTTTTACCCTGAGGAGAGACTGCTGGAG < 41bp 0.837806138569236 0.564677190289751 0.8777044 0.17158669 prediction 0.54625789655897 Functional Loss - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47637471 chr2:47637473 stopgain 0.998 0 23 hm5C_associated_SNPs_59279 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:47637342-47637482
64251 chrX 54837309 54837309 1 + G T LUSC 54837306 + 54837286 54837326 41 CAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAA CAGTGATCAGAGTCAGGCTTCTGTAACCACAGGTGGCCGAA < 41bp 0.901639483880639 0.628517707609589 0.82851046 0.39404953 prediction 0.546243552542099 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837306 chrX:54837309 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_59280 0 0 12 YTHDF2 POSTAR2 GSE78030,GSM2064706 chrX:54837300-54837320
64251 chr21 38884448 38884448 1 + C T CESC 38884446 + 38884426 38884466 41 CAGGCCAAGGGTCTACAATTCTCCAACGAATAGCTCCTCTA CAGGCCAAGGGTCTACAATTCTTCAACGAATAGCTCCTCTA < 41bp 0.773119700380811 0.491444188432228 0.9499819 0.09111062 prediction 0.546239400761622 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38884446 chr21:38884448 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59281 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr21:38884416-38884453
64251 chr6 42993784 42993784 1 + G T BLCA 42993781 + 42993761 42993801 41 TCTTCTCTCCAAAGGTAGCCCGGGACCCTCGCTTTGATGAT TCTTCTCTCCAAAGGTAGCCCGGTACCCTCGCTTTGATGAT < 41bp 0.773111986960561 0.383542008293058 0.80283374 0.3047951 prediction 0.546223973921122 Functional Loss - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42993781 chr6:42993784 nonsynonymous SNV 0.975 5 24 hm5C_associated_SNPs_59283 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr6:42993771-42993825
64251 chr7 148427288 148427288 1 + G T LUAD 148427286 + 148427266 148427306 41 GACCAGATCTGGGACGACCTCAGAGCCGGCATCCAGCAGGT GACCAGATCTGGGACGACCTCATAGCCGGCATCCAGCAGGT < 41bp 0.872453931440387 0.599353688674934 0.71738267 0.06496894 prediction 0.546200485530907 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148427286 chr7:148427288 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_59284 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148427087-148427303
64251 chr16 28507813 28507813 1 + G T UCEC 28507811 + 28507791 28507831 41 GGGATCAGGGCCGACCGGGCCAGGATGGAAGAGCTGGTACA GGGATCAGGGCCGACCGGGCCATGATGGAAGAGCTGGTACA < 41bp 0.874204504076659 0.601140757043968 0.8851274 0.53475165 prediction 0.546127494065382 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507811 chr16:28507813 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_59286 0 0 2 LIN28B POSTAR2 ENCODE chr16:28507759-28507817
64251 chr20 44049292 44049292 1 + A T UCEC 44049288 + 44049268 44049308 41 CCGCCATGATCAACAACTCTCGAAACCTCAACATCCAGCTC CCGCCATGATCAACAACTCTCGAATCCTCAACATCCAGCTC < 41bp 0.783637231919506 0.510575823325107 0.5423252 0.40455168 prediction 0.546122817188798 Functional Loss - PIGT ENSG00000124155 CDS Human protein_coding chr20:44049288 chr20:44049292 nonsynonymous SNV 0.971 1 25 hm5C_associated_SNPs_59288 0 0 9 NOP58 POSTAR2 GSE43666,GSM1067862 chr20:44049264-44049301
64251 chr1 31194488 31194488 1 + C T CESC 31194486 + 31194466 31194506 41 TTGGGCCCCACGTCCAGCGACTCGATGACCTGGGACAGGAA TTGGGCCCCACGTCCAGCGACTTGATGACCTGGGACAGGAA < 41bp 0.774189235823907 0.50112840044931 0.260809 0.10437763 prediction 0.546121670749194 Functional Loss - MATN1 ENSG00000162510 CDS Human protein_coding chr1:31194486 chr1:31194488 nonsynonymous SNV 0.520 0 23 hm5C_associated_SNPs_59289 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:31194439-31194492
64251 chr9 125047485 125047485 1 + G T LUAD 125047482 + 125047462 125047502 41 ATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCA ATTGCTGTGGTAACTGCTGACGGTAAGCTTGCTTTAAACCA < 41bp 0.897801713966541 0.62475611403771 0.42327225 0.16857344 prediction 0.546091199857661 Functional Loss - MRRF ENSG00000148187 CDS Human protein_coding chr9:125047482 chr9:125047485 synonymous SNV . 0 24 hm5C_associated_SNPs_59291 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:125047458-125047486
64251 chr6 34838782 34838782 1 + C T UCEC 34838780 + 34838760 34838800 41 TATTGCTTCATGGCTGTGACCTCGAGCTGCTCACTTCAGTG TATTGCTTCATGGCTGTGACCTTGAGCTGCTCACTTCAGTG < 41bp 0.790074031169428 0.517041742492649 0.47962198 0.22260454 prediction 0.546064577353556 Functional Loss - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34838780 chr6:34838782 synonymous SNV . 0 23 hm5C_associated_SNPs_59292 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:34838777-34838798
64251 chr4 38023260 38023260 1 + G T PAAD 38023258 + 38023238 38023278 41 CCTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCCA CCTTCACGGTGGCCGCAGTGCATCAGACAGCTAAGGCGCCA < 41bp 0.860082650149205 0.587052001485694 0.37576848 0.22481906 prediction 0.546061297327021 Functional Loss - TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38023258 chr4:38023260 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_59293 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:38023218-38023269
64251 chr10 99211554 99211554 1 + A T STAD 99211550 + 99211530 99211570 41 GGGGTCTAGTACAGCGCTGGCGCTACGGCAAGGTCTGCCTG GGGGTCTAGTACAGCGCTGGCGCTTCGGCAAGGTCTGCCTG < 41bp 0.773008044274138 0.445559438388634 0.82213557 0.6368724 prediction 0.546016088548277 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211550 chr10:99211554 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_59298 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr10:99211502-99211559
64251 chr1 32660613 32660613 1 + G T UCEC 32660611 + 32660591 32660631 41 ATGACCTGAACAAGAGGGTACAGGACCTGAGTGCTGGTGGC ATGACCTGAACAAGAGGGTACATGACCTGAGTGCTGGTGGC < 41bp 0.772959819286013 0.443741705163581 0.36575633 0.29472634 prediction 0.545919638572025 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32660611 chr1:32660613 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_59303 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:32660500-32660656
64251 chr17 21731560 21731560 1 + G T UCEC 21731558 + 21731538 21731578 41 GGCCGCACTCTTTCTGACTACAGCATCCAGAAAGAGTCGAC GGCCGCACTCTTTCTGACTACATCATCCAGAAAGAGTCGAC < 41bp 0.77295080322546 0.453798947426594 0.15353936 0.11438942 prediction 0.545901606450921 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731558 chr17:21731560 nonsynonymous SNV 0.244 0 23 hm5C_associated_SNPs_59304 0 0 4 LIN28B POSTAR2 ENCODE chr17:21731509-21731578
64251 chr2 138771446 138771446 1 + G T LUSC 138771443 + 138771423 138771463 41 CAGATGACCTCACTCAGATGCTGGACAACCTAGGGCTTAAG CAGATGACCTCACTCAGATGCTGTACAACCTAGGGCTTAAG < 41bp 0.772933027436475 0.408682861800002 0.31070822 0.10150194 prediction 0.545866054872949 Functional Loss - HNMT ENSG00000150540 CDS Human protein_coding chr2:138771443 chr2:138771446 nonsynonymous SNV 0.547 3 24 hm5C_associated_SNPs_59306 0 0 1 UCHL5 POSTAR2 ENCODE chr2:138771342-138771468
64251 chr1 40881913 40881913 1 + G T LUAD 40881911 + 40881891 40881931 41 CTGAAAATCTGAACCTGTTTCCGGAGCCAGGGAGCAAATCA CTGAAAATCTGAACCTGTTTCCTGAGCCAGGGAGCAAATCA < 41bp 0.772917448472128 0.441353261120223 0.85101676 0.061647117 prediction 0.545834896944255 Functional Loss - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40881911 chr1:40881913 synonymous SNV . 0 23 hm5C_associated_SNPs_59310 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:40881905-40881927
64251 chr12 53584366 53584366 1 + A C rs150773356 53584362 + 53584342 53584382 41 GGTTACATTAGTGGAGTCCGCCACAGCTTCGAACCCTCTCC GGTTACATTAGTGGAGTCCGCCACCGCTTCGAACCCTCTCC < 41bp 0.772900125702648 0.444348864039444 0.11373481 0.11645016 prediction 0.545800251405297 Functional Loss - ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584362 chr12:53584366 . . 0 25 hm5C_associated_SNPs_59312 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53584291-53584378
64251 chr1 214170400 214170400 1 + G T LUSC 214170398 + 214170378 214170418 41 CCCGGGTTGAGAATATAATTCGGGGTATGAGCCATTCCCCC CCCGGGTTGAGAATATAATTCGTGGTATGAGCCATTCCCCC < 41bp 0.858739650647013 0.585844805352045 0.93405724 0.6420474 prediction 0.545789690589935 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170398 chr1:214170400 synonymous SNV . 0 23 hm5C_associated_SNPs_59315 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:214170388-214170427
64251 chr1 113657094 113657094 1 + G C LUSC 113657093 + 113657073 113657113 41 TGGAGGATAAGACAGTAACACGAGGTGAAACTGCGGTGTTA TGGAGGATAAGACAGTAACACCAGGTGAAACTGCGGTGTTA < 41bp 0.772892773281259 0.47524135941685 0.93813765 0.93243337 prediction 0.545785546562518 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657093 chr1:113657094 nonsynonymous SNV 0.931 1 22 hm5C_associated_SNPs_59316 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:113657081-113657102
64251 chr13 41373280 41373280 1 + C T UCEC 41373278 + 41373258 41373298 41 CCTGACCTGTACCGGGGCCTCACCGACTGCTGCCTGAAGAC CCTGACCTGTACCGGGGCCTCATCGACTGCTGCCTGAAGAC < 41bp 0.780092496219741 0.507206971743236 0.29370713 0.27952543 prediction 0.54577104895301 Functional Loss - SLC25A15 ENSG00000102743 CDS Human protein_coding chr13:41373278 chr13:41373280 nonsynonymous SNV 0.884 0 23 hm5C_associated_SNPs_59317 0 0 1 YBX3 POSTAR2 ENCODE chr13:41373269-41373380
64251 chr15 43483198 43483198 1 + G T UCEC 43483195 + 43483175 43483215 41 GCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAA GCAGCTCTTTTGATGCTGACCAATAATGTGGATTTTGTGAA < 41bp 0.772882349371424 0.405992618587669 0.14189026 0.08397004 prediction 0.545764698742847 Functional Loss - CCNDBP1 ENSG00000166946 CDS Human protein_coding chr15:43483195 chr15:43483198 nonsynonymous SNV 0.965 0 24 hm5C_associated_SNPs_59320 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr15:43483169-43483234
64251 chr15 91500925 91500925 1 + G T rs149096037 91500923 + 91500903 91500943 41 CCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTCTG CCTAGTCATGGCTGAGGTGGCCTCGGGGGGCTGGCATTCTG < 41bp 0.772875388263323 0.426850636724396 0.88994306 0.8094263 prediction 0.545750776526646 Functional Loss - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91500923 chr15:91500925 nonsynonymous SNV 0.907 5 23 hm5C_associated_SNPs_59322 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585674 chr15:91500919-91500943
64251 chr1 76256985 76256985 1 + G T UCEC 76256982 + 76256962 76257002 41 TATTGTAGGAGAAATTGACACAAGATTCTCTTTTTGTGCGG TATTGTAGGAGAAATTGACACAATATTCTCTTTTTGTGCGG < 41bp 0.883742991256277 0.610872892667624 0.33391717 0.15119082 prediction 0.545740197177305 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76256982 chr1:76256985 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59324 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:76256965-76257016
64251 chr16 50828335 50828335 1 + G T LUSC 50828333 + 50828313 50828353 41 TCTTTGACAGCATGGCCGATCGGGATGGTACTGAAAACGCC TCTTTGACAGCATGGCCGATCGTGATGGTACTGAAAACGCC < 41bp 0.834713557555186 0.56185970627027 0.8902214 0.38278866 prediction 0.545707702569832 Functional Loss - CYLD ENSG00000083799 CDS Human protein_coding chr16:50828333 chr16:50828335 synonymous SNV . 0 23 hm5C_associated_SNPs_59329 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:50828294-50828336
64251 chr7 91981884 91981884 1 + G T BLCA 91981881 + 91981861 91981901 41 GAAACAAGGGTCAAATACATCTGGATCTGATACACTCAGCT GAAACAAGGGTCAAATACATCTGTATCTGATACACTCAGCT < 41bp 0.772844715939091 0.399156484395691 0.18694526 0.2003291 prediction 0.545689431878181 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:91981881 chr7:91981884 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_59331 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:91981870-91981893
64251 chr12 110451051 110451051 1 + C T UCS 110451049 + 110451029 110451069 41 CTGAGCTGCTCCAAAAAATTCTCGAGGTATCCATGAAAATG CTGAGCTGCTCCAAAAAATTCTTGAGGTATCCATGAAAATG < 41bp 0.783424472655503 0.510583830766872 0.2508099 0.27150062 prediction 0.545681283777262 Functional Loss - ANKRD13A ENSG00000076513 CDS Human protein_coding chr12:110451049 chr12:110451051 synonymous SNV . 0 23 hm5C_associated_SNPs_59333 0 0 3 BUD13 POSTAR2 ENCODE chr12:110450982-110451051
64251 chr11 61205220 61205220 1 + C T SKCM 61205218 + 61205198 61205238 41 CATGATTGAAATCCCTTTGCCTCCATGGCAGGAGAGAACTG CATGATTGAAATCCCTTTGCCTTCATGGCAGGAGAGAACTG < 41bp 0.824307039740726 0.551500270151799 0.9561454 0.23737869 prediction 0.545613539177854 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61205218 chr11:61205220 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_59337 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:61205213-61205251
64251 chrX 54837408 54837408 1 + G T UCEC 54837405 + 54837385 54837425 41 CTTTTGGGCCCGCAGGGCATCAAGGACTCGGTTGGCTGCTT CTTTTGGGCCCGCAGGGCATCAATGACTCGGTTGGCTGCTT < 41bp 0.907971849403212 0.635179237727378 0.8497446 0.16258374 prediction 0.545585223351666 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837405 chrX:54837408 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59339 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:54837396-54837427
64251 chr17 33289937 33289937 1 + A T rs8249 33289933 + 33289913 33289953 41 AGTGTTATATACCAAAATGCCAACATTTCCACGACAGACTT AGTGTTATATACCAAAATGCCAACTTTTCCACGACAGACTT < 41bp 0.772765232032239 0.484936955731224 0.02373302 0.020867944 prediction 0.545530464064477 Functional Loss - ZNF830 ENSG00000198783 UTR3 Human protein_coding chr17:33289933 chr17:33289937 . . 0 25 hm5C_associated_SNPs_59341 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr17:33289931-33289958
64251 chr4 123663257 123663257 1 + C T BLCA 123663255 + 123663235 123663275 41 CCAGTGCAGTGGGACAACTTCTCAATGAAGCAGTTCAAGCA CCAGTGCAGTGGGACAACTTCTTAATGAAGCAGTTCAAGCA < 41bp 0.789390307230825 0.516626303858448 0.10889691 0.06874779 prediction 0.545528006744754 Functional Loss - BBS12 ENSG00000181004 CDS Human protein_coding chr4:123663255 chr4:123663257 synonymous SNV . 0 23 hm5C_associated_SNPs_59342 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr4:123663240-123663262
64251 chr2 110373228 110373228 1 + G C HNSC 110373227 + 110373207 110373247 41 TACCTGAGTCGGAGCATCGCCGAGGAGATCAAGAACCTGGT TACCTGAGTCGGAGCATCGCCCAGGAGATCAAGAACCTGGT < 41bp 0.772757922323923 0.469270056339655 0.8642072 0.88336176 prediction 0.545515844647847 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373227 chr2:110373228 nonsynonymous SNV 0.843 1 22 hm5C_associated_SNPs_59343 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:110373206-110373229
64251 chr7 66410044 66410044 1 + G C OV 66410043 + 66410023 66410063 41 ACCCTCAAGCATCTCACAAACGACACCACAACTCCGGAAAG ACCCTCAAGCATCTCACAAACCACACCACAACTCCGGAAAG < 41bp 0.824924598084654 0.552166679366482 0.056083202 0.020857245 prediction 0.545515837436344 Functional Loss - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66410043 chr7:66410044 nonsynonymous SNV 0.963 1 22 hm5C_associated_SNPs_59344 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:66409973-66410051
64251 chr2 101185428 101185428 1 + G T LUSC 101185425 + 101185405 101185445 41 AAGATATGACTTTGGAAGAGCTGGAGGATCATGAAGACGAG AAGATATGACTTTGGAAGAGCTGTAGGATCATGAAGACGAG < 41bp 0.772744712710967 0.404906746940895 0.31027597 0.13969505 prediction 0.545489425421934 Functional Loss - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101185425 chr2:101185428 stopgain 0.997 1 24 hm5C_associated_SNPs_59346 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101185420-101185473
64251 chr2 101185427 101185427 1 + G T LUSC 101185425 + 101185405 101185445 41 AAGATATGACTTTGGAAGAGCTGGAGGATCATGAAGACGAG AAGATATGACTTTGGAAGAGCTTGAGGATCATGAAGACGAG < 41bp 0.772744712710967 0.459297998993442 0.31027597 0.11294073 prediction 0.545489425421934 Functional Loss - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101185425 chr2:101185427 synonymous SNV . 0 23 hm5C_associated_SNPs_59347 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:101185420-101185473
64251 chr6 26251962 26251962 1 + G T SARC 26251959 + 26251939 26251979 41 AAGGCGCAGAAGAAGGATGGCAAGAAGCGTAAACGCAGCCG AAGGCGCAGAAGAAGGATGGCAATAAGCGTAAACGCAGCCG < 41bp 0.879746868123519 0.607011399653865 0.439738 0.32391918 prediction 0.545470936939306 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26251959 chr6:26251962 nonsynonymous SNV 0.462 1 24 hm5C_associated_SNPs_59351 0 0 4 EIF3D POSTAR2 ENCODE chr6:26251884-26252016
64251 chr14 90455387 90455387 1 + G T COAD 90455384 + 90455364 90455404 41 TTAAAGAGAGCATGCTGACACTGGGGAAGGAAAGCAAGACT TTAAAGAGAGCATGCTGACACTGTGGAAGGAAAGCAAGACT < 41bp 0.772718320431093 0.394887465172974 0.29814866 0.061280698 prediction 0.545436640862187 Functional Loss - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90455384 chr14:90455387 nonsynonymous SNV 0.568 1 24 hm5C_associated_SNPs_59354 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:90455369-90455393
64251 chr6 26217379 26217379 1 + G T BRCA 26217377 + 26217357 26217397 41 TGGCAGCGGTGCTGGAATATCTGACGGCCGAGATCTTAGAG TGGCAGCGGTGCTGGAATATCTTACGGCCGAGATCTTAGAG < 41bp 0.853536892603171 0.580820141446573 0.31302196 0.07357177 prediction 0.545433502313196 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217377 chr6:26217379 synonymous SNV . 0 23 hm5C_associated_SNPs_59355 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr6:26217356-26217379
64251 chr1 10473273 10473273 1 + C T SKCM 10473271 + 10473251 10473291 41 ACAGGGAAGTGGACCGCCATCTCCGCCCTGGAATACGGCGT ACAGGGAAGTGGACCGCCATCTTCGCCCTGGAATACGGCGT < 41bp 0.772715151225968 0.497206218219723 0.32409748 0.22795257 prediction 0.545430302451936 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10473271 chr1:10473273 nonsynonymous SNV 0.532 4 23 hm5C_associated_SNPs_59356 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:10473217-10473283
64251 chr19 46201945 46201945 1 + G T UCEC 46201942 + 46201922 46201962 41 CCTCACAGCCCCGGCCCCACCAGGATCCAGGCTATTGTAAG CCTCACAGCCCCGGCCCCACCAGTATCCAGGCTATTGTAAG < 41bp 0.905948801962621 0.633251587926052 0.46353716 0.1327348 prediction 0.545394428073138 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46201942 chr19:46201945 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_59360 0 0 1 SF3B1 POSTAR2 ENCODE chr19:46201923-46201954
64251 chr1 44442888 44442888 1 + G T STAD 44442886 + 44442866 44442906 41 GGGTCATCGTCGCAATTCTTCAGGTGATGAATCCCCTTGGG GGGTCATCGTCGCAATTCTTCATGTGATGAATCCCCTTGGG < 41bp 0.871579769953979 0.598891380584461 0.9095219 0.5227533 prediction 0.545376778739035 Functional Loss - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44442886 chr1:44442888 nonsynonymous SNV 0.975 4 23 hm5C_associated_SNPs_59362 0 0 17 BUD13 POSTAR2 ENCODE chr1:44442837-44442968
64251 chr17 21215510 21215510 1 + G T SARC 21215508 + 21215488 21215528 41 CCTGGGGGACCCCGTTCCAGCAGCTGAAGCAGGTGGTGGAG CCTGGGGGACCCCGTTCCAGCATCTGAAGCAGGTGGTGGAG < 41bp 0.77266236044666 0.429433784684467 0.9174341 0.40793306 prediction 0.545324720893319 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21215508 chr17:21215510 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59370 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:21215481-21215513
64251 chr2 9614683 9614683 1 + G C rs376507579 9614682 + 9614662 9614702 41 CTGGCGGCCCCGCCCCGCCCCGCCCGGCTGCTCCATGGCGC CTGGCGGCCCCGCCCCGCCCCCCCCGGCTGCTCCATGGCGC < 41bp 0.772609302048874 0.497843333071031 0.0442259 0.014726162 prediction 0.545218604097748 Functional Loss - IAH1 ENSG00000134330 UTR5 Human protein_coding chr2:9614682 chr2:9614683 . . 0 22 hm5C_associated_SNPs_59373 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:9614680-9614700
64251 chr2 27322557 27322557 1 + G C CESC 27322553 + 27322533 27322573 41 GGAGGAGCGTGCAGGAAGCACTGAGATTCGGGTGCCAGGTG GGAGGAGCGTGCAGGAAGCACTGACATTCGGGTGCCAGGTG < 41bp 0.791681649561222 0.51908036480283 0.2884506 0.20622832 prediction 0.545202569516784 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27322553 chr2:27322557 nonsynonymous SNV 0.144 0 25 hm5C_associated_SNPs_59375 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:27322489-27322563
64251 chr20 18295925 18295925 1 + G T STAD 18295923 + 18295903 18295943 41 GAGACCCTGGAGTGATCAAGCAGAAGGTCCTGAGGGAGAAG GAGACCCTGGAGTGATCAAGCATAAGGTCCTGAGGGAGAAG < 41bp 0.772588114975894 0.446279219503051 0.7979231 0.36070937 prediction 0.545176229951788 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18295923 chr20:18295925 stopgain 0.003 0 23 hm5C_associated_SNPs_59379 0 0 1 GRWD1 POSTAR2 ENCODE chr20:18295924-18296004
64251 chr7 6443453 6443453 1 + G T rs188629172 6443450 + 6443430 6443470 41 TGTACAACTTAACTCACTGGCGAGAATACAGCGTGGGACCC TGTACAACTTAACTCACTGGCGATAATACAGCGTGGGACCC < 41bp 0.828266206451509 0.555693054669669 0.20911878 0.053465366 prediction 0.545146303563681 Functional Loss - RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6443450 chr7:6443453 . . 0 24 hm5C_associated_SNPs_59380 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:6442928-6443482
64251 chr17 30520218 30520218 1 + A T UCEC 30520214 + 30520194 30520234 41 GAGGATGTCAAGAATGTAGTCAGAAAACATATAAGTGATGG GAGGATGTCAAGAATGTAGTCAGATAACATATAAGTGATGG < 41bp 0.772556105412735 0.471725283292247 0.26623964 0.35762137 prediction 0.54511221082547 Functional Loss - RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30520214 chr17:30520218 stopgain 0.929 1 25 hm5C_associated_SNPs_59381 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30520164-30520237
64251 chr6 155569292 155569292 1 + G C LUAD 155569291 + 155569271 155569311 41 TCCCTGACGGACCAGGAGAGCGAGGAGCACTACCACCTGAC TCCCTGACGGACCAGGAGAGCCAGGAGCACTACCACCTGAC < 41bp 0.772531684852389 0.475445464720595 0.8994607 0.899969 prediction 0.545063369704778 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155569291 chr6:155569292 nonsynonymous SNV 0.948 4 22 hm5C_associated_SNPs_59382 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:155569262-155569293
64251 chr11 75480139 75480139 1 + G C CESC 75480138 + 75480118 75480158 41 GGAGGACCTGCGCTGTCGCGCGAGGGGTCTGGGAGATGGGG GGAGGACCTGCGCTGTCGCGCCAGGGGTCTGGGAGATGGGG < 41bp 0.772522839860865 0.475809979667148 0.9189191 0.89821786 prediction 0.545045679721731 Functional Loss - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480138 chr11:75480139 nonsynonymous SNV 0.880 0 22 hm5C_associated_SNPs_59383 0 0 3 DDX3X POSTAR2 ENCODE chr11:75480105-75480154
64251 chr1 109103096 109103096 1 + G C LUAD 109103095 + 109103075 109103115 41 TTTAAGGTGGACTTCGAGCTCGAGGAGCTCTCCTCAGTGCC TTTAAGGTGGACTTCGAGCTCCAGGAGCTCTCCTCAGTGCC < 41bp 0.810088930787884 0.537568886368279 0.9242573 0.89688456 prediction 0.54504008883921 Functional Loss - FAM102B ENSG00000162636 CDS Human protein_coding chr1:109103095 chr1:109103096 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_59385 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:109103072-109103101
64251 chr1 231488418 231488418 1 + G T UCEC 231488415 + 231488395 231488435 41 TTAGTGGGAAAGGATATGTTCTAGGAGAAACAAGCAATTTA TTAGTGGGAAAGGATATGTTCTATGAGAAACAAGCAATTTA < 41bp 0.772516143111208 0.408529534108363 0.13831097 0.07114205 prediction 0.545032286222415 Functional Loss - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488415 chr1:231488418 stopgain 0.919 1 24 hm5C_associated_SNPs_59386 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:231488385-231488421
64251 chr12 113722554 113722554 1 + G T UCEC 113722551 + 113722531 113722571 41 TTCTTCTCCAAGCACGTGCCCTGGAGTTACCTCGTCTTTCT TTCTTCTCCAAGCACGTGCCCTGTAGTTACCTCGTCTTTCT < 41bp 0.772514486777522 0.380344552169943 0.56104136 0.18460941 prediction 0.545028973555043 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113722551 chr12:113722554 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_59387 0 0 4 BUD13 POSTAR2 ENCODE chr12:113722529-113722572
64251 chr19 57036378 57036378 1 + A T OV 57036374 + 57036354 57036394 41 TCAGCATCAGAGAATTCATACTGGAGAGAAACCCTATGAAT TCAGCATCAGAGAATTCATACTGGTGAGAAACCCTATGAAT < 41bp 0.839136983615933 0.566636064519912 0.2252281 0.18408093 prediction 0.545001838192042 Functional Loss - ZNF471 ENSG00000196263 CDS Human protein_coding chr19:57036374 chr19:57036378 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_59392 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57036351-57036389
64251 chrX 109416587 109416587 1 + G C PRAD 109416586 + 109416566 109416606 41 ACTCTCATGACCATGACCCACGGGAAGCTGGTCATCCTGTT ACTCTCATGACCATGACCCACCGGAAGCTGGTCATCCTGTT < 41bp 0.772484328334082 0.473499718183477 0.42048416 0.16178477 prediction 0.544968656668165 Functional Loss - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109416586 chrX:109416587 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_59401 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:109416571-109416609
64251 chr1 150444095 150444095 1 + C T SKCM 150444093 + 150444073 150444113 41 TGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCC TGGGGTAAAGTCTGCCTTCCCTTCATCTGTAAGGGCCCTCC < 41bp 0.772469251392064 0.485350529166292 0.94558907 0.16372612 prediction 0.544938502784127 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150444093 chr1:150444095 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_59404 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:150444071-150444109
64251 chr14 24624871 24624871 1 + C T LUAD 24624869 + 24624849 24624889 41 AGGCAACTTGTCCCCAGTGTCACCAGACCTTCTGTGTGCGC AGGCAACTTGTCCCCAGTGTCATCAGACCTTCTGTGTGCGC < 41bp 0.788697504028147 0.516272948176203 0.26085454 0.27264428 prediction 0.544849111703889 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24624869 chr14:24624871 synonymous SNV . 0 23 hm5C_associated_SNPs_59413 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:24624858-24624891
64251 chr4 39739088 39739088 1 + G T UCEC 39739086 + 39739066 39739106 41 TCTTGTAGATGAGAATTTTACAGAATTAAGAGGAGAAATAG TCTTGTAGATGAGAATTTTACATAATTAAGAGGAGAAATAG < 41bp 0.818333629401622 0.545917313833274 0.10824737 0.025185347 prediction 0.544832631136696 Functional Loss - UBE2K ENSG00000078140 CDS Human protein_coding chr4:39739086 chr4:39739088 stopgain 1.000 1 23 hm5C_associated_SNPs_59415 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:39739052-39739113
64251 chr8 125463083 125463083 1 + G T rs3812473 125463081 + 125463061 125463101 41 ATTTCCGGCACCGGCATGGCCGGGTGAGCTGCAGGCTACCT ATTTCCGGCACCGGCATGGCCGTGTGAGCTGCAGGCTACCT < 41bp 0.843587485747776 0.571179200777471 0.8364981 0.14666837 prediction 0.54481656994061 Functional Loss - TRMT12 ENSG00000183665 UTR5 Human protein_coding chr8:125463081 chr8:125463083 . . 0 23 hm5C_associated_SNPs_59418 0 0 1 DDX3X POSTAR2 ENCODE chr8:125463065-125463100
64251 chr12 21661416 21661416 1 + G T UCEC 21661413 + 21661393 21661433 41 TGAAAGCTACAGGTTTTTTTCTGGGTGGTGTATTTGTAGTC TGAAAGCTACAGGTTTTTTTCTGTGTGGTGTATTTGTAGTC < 41bp 0.879591592817443 0.60718517229984 0.8746495 0.10219303 prediction 0.544812841035207 Functional Loss - GOLT1B ENSG00000111711 CDS Human protein_coding chr12:21661413 chr12:21661416 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_59420 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr12:21661398-21661451
64251 chr18 29102147 29102147 1 + C T GBM 29102145 + 29102125 29102165 41 ATCTCTGGAGCCTGCTTATCCTCCAGTGTTCTACCTAAATA ATCTCTGGAGCCTGCTTATCCTTCAGTGTTCTACCTAAATA < 41bp 0.794328739607378 0.52193168302336 0.934671 0.04353845 prediction 0.544794113168036 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29102145 chr18:29102147 nonsynonymous SNV 0.028 0 23 hm5C_associated_SNPs_59421 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:29102132-29102156
64251 chr20 31022332 31022332 1 + G T LUSC 31022330 + 31022310 31022350 41 CCCACCACGGAGTCCTCCTGCCGGGGTTGGACTGGCGCCAG CCCACCACGGAGTCCTCCTGCCTGGGTTGGACTGGCGCCAG < 41bp 0.772362687786814 0.433200437611746 0.92459136 0.3438793 prediction 0.544725375573628 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022330 chr20:31022332 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59424 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:31022321-31022344
64251 chr20 31022333 31022333 1 + G T LUSC 31022330 + 31022310 31022350 41 CCCACCACGGAGTCCTCCTGCCGGGGTTGGACTGGCGCCAG CCCACCACGGAGTCCTCCTGCCGTGGTTGGACTGGCGCCAG < 41bp 0.772362687786814 0.383057594768461 0.92459136 0.5566043 prediction 0.544725375573628 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022330 chr20:31022333 synonymous SNV . 0 24 hm5C_associated_SNPs_59425 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:31022321-31022344
64251 chrX 129190757 129190757 1 + G C rs187046748 129190753 + 129190733 129190773 41 GGTGGAATGGGGTGGGGGAACATGGACTTGTGACTAACGAA GGTGGAATGGGGTGGGGGAACATGCACTTGTGACTAACGAA < 41bp 0.772357392882899 0.476812662927374 0.8863979 0.8657819 prediction 0.544714785765799 Functional Loss - BCORL1 ENSG00000085185 UTR3 Human protein_coding chrX:129190753 chrX:129190757 . . 0 25 hm5C_associated_SNPs_59426 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129190742-129190762
64251 chr7 133059665 133059665 1 + A T LUSC 133059661 + 133059641 133059681 41 ACTCTGTGGTCCTGGGATACCTGCAGGACACTGTAGTGACT ACTCTGTGGTCCTGGGATACCTGCTGGACACTGTAGTGACT < 41bp 0.806356273047352 0.534008521701114 0.2887563 0.096782684 prediction 0.544695502692477 Functional Loss - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133059661 chr7:133059665 nonsynonymous SNV 0.878 2 25 hm5C_associated_SNPs_59429 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr7:133059656-133059681
64251 chr1 214171568 214171568 1 + G T UCEC 214171565 + 214171545 214171585 41 AGTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATATCA AGTCCGAGTGCGGCGATCTTCAATATATGTCTGAAATATCA < 41bp 0.772342293818353 0.429246069610128 0.40550396 0.1367574 prediction 0.544684587636707 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171565 chr1:214171568 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59432 0 0 2 GRWD1 POSTAR2 ENCODE chr1:214171566-214171606
64251 chr2 239237863 239237863 1 + G T LUAD 239237860 + 239237840 239237880 41 GAGAAGGAGAGACTGAGAGACAGGGACCGAGAGCGCGACCG GAGAAGGAGAGACTGAGAGACAGTGACCGAGAGCGCGACCG < 41bp 0.879096066796614 0.606755936427743 0.882145 0.16995254 prediction 0.544680260737741 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239237860 chr2:239237863 nonsynonymous SNV 0.017 0 24 hm5C_associated_SNPs_59433 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:239237851-239237872
64251 chr14 31144232 31144232 1 + C T PAAD 31144230 + 31144210 31144250 41 AGAAAAAAAGACTTATTGATCTCCATACAAATGTTGCCACT AGAAAAAAAGACTTATTGATCTTCATACAAATGTTGCCACT < 41bp 0.77233866653828 0.486943042801716 0.94391376 0.64573294 prediction 0.54467733307656 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31144230 chr14:31144232 synonymous SNV . 0 23 hm5C_associated_SNPs_59434 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:31144223-31144259
64251 chrX 54470970 54470970 1 + G T STAD 54470968 + 54470948 54470988 41 GAAGATGGCTGGACCATTGTCCGGAGAAAAAAATGAGTGGG GAAGATGGCTGGACCATTGTCCTGAGAAAAAAATGAGTGGG < 41bp 0.849641938488139 0.577369546208979 0.8520866 0.26485848 prediction 0.544544784558318 Functional Loss - TSR2 ENSG00000158526 CDS Human protein_coding chrX:54470968 chrX:54470970 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_59444 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54470900-54471137
64251 chr3 142403153 142403153 1 + C T COAD 142403151 + 142403131 142403171 41 AGGAGCTGATGAAGCTTTCTCCCGAGGAATTACTGCTGCGA AGGAGCTGATGAAGCTTTCTCCTGAGGAATTACTGCTGCGA < 41bp 0.794158238476811 0.521891523326302 0.5187281 0.37118012 prediction 0.544533430301017 Functional Loss - PLS1 ENSG00000120756 CDS Human protein_coding chr3:142403151 chr3:142403153 synonymous SNV . 0 23 hm5C_associated_SNPs_59445 0 0 1 ZNF622 POSTAR2 ENCODE chr3:142403085-142403241
64251 chr11 12245002 12245002 1 + C T STAD 12245000 + 12244980 12245020 41 AGGAGCTGGAGCACTACCCTCTCGAGAGACTGGGCTCGGTG AGGAGCTGGAGCACTACCCTCTTGAGAGACTGGGCTCGGTG < 41bp 0.804483090492704 0.532218919023386 0.9205688 0.19626659 prediction 0.544528342938636 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12245000 chr11:12245002 synonymous SNV . 0 23 hm5C_associated_SNPs_59446 0 0 1 FMR1 POSTAR2 ENCODE chr11:12244974-12245039
64251 chr19 44331594 44331594 1 + A C rs17712224 44331590 + 44331570 44331610 41 GTCCTTAAGGTTCTTGGACTCTGCATGGTGAGTTGGTCGTG GTCCTTAAGGTTCTTGGACTCTGCCTGGTGAGTTGGTCGTG < 41bp 0.772262285402343 0.431721358655263 0.2534245 0.13770783 prediction 0.544524570804687 Functional Loss - ZNF283 ENSG00000167637 UTR5 Human protein_coding chr19:44331590 chr19:44331594 . . 0 25 hm5C_associated_SNPs_59447 0 0 1 PRPF8 POSTAR2 ENCODE chr19:44331588-44331637
64251 chr5 35876473 35876473 1 + A T COAD 35876469 + 35876449 35876489 41 CGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTGACA CGCTGCCCCCTCCATTTTCTCTCCTATCTGGAATCCTGACA < 41bp 0.77226180309213 0.450075397927414 0.96144855 0.03697574 prediction 0.54452360618426 Functional Loss - IL7R ENSG00000168685 CDS Human protein_coding chr5:35876469 chr5:35876473 nonsynonymous SNV 0.039 1 25 hm5C_associated_SNPs_59448 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:35876453-35876477
64251 chr17 42427687 42427687 1 + G T LUAD 42427684 + 42427664 42427704 41 TGTGTTATGGTCGATGGCTCCTGGGGGTGCTGCCCCATGCC TGTGTTATGGTCGATGGCTCCTGTGGGTGCTGCCCCATGCC < 41bp 0.911251523284437 0.639020875208896 0.9165306 0.43020707 prediction 0.544461296151082 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42427684 chr17:42427687 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59458 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:42427667-42427692
64251 chr11 118942398 118942398 1 + G T STAD 118942396 + 118942376 118942416 41 CAGCCCTAAGTGACCCTTCTCAGGACCTGCAGTTCATTGTG CAGCCCTAAGTGACCCTTCTCATGACCTGCAGTTCATTGTG < 41bp 0.879488638083426 0.60729967240569 0.94298327 0.546104 prediction 0.544377931355473 Functional Loss - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118942396 chr11:118942398 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_59467 0 0 1 FMR1 POSTAR2 ENCODE chr11:118942329-118942441
64251 chr19 10224677 10224677 1 + G T BRCA 10224674 + 10224654 10224694 41 GCATCAGCCTCAACCGCTACCTGGGCATCGTGCACCCCTTC GCATCAGCCTCAACCGCTACCTGTGCATCGTGCACCCCTTC < 41bp 0.905511038736996 0.633327561095784 0.12355712 0.041750968 prediction 0.544366955282423 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224674 chr19:10224677 nonsynonymous SNV 0.109 3 24 hm5C_associated_SNPs_59468 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10224640-10224678
64251 chr17 40462540 40462540 1 + C T rs2230135 40462538 + 40462518 40462558 41 TTACCAGCCCTGACCATGTACTCGATCAGGATGGAGAATTC TTACCAGCCCTGACCATGTACTTGATCAGGATGGAGAATTC < 41bp 0.772178891282892 0.495907935746107 0.21941975 0.047801763 prediction 0.544357782565784 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40462538 chr17:40462540 synonymous SNV . 0 23 hm5C_associated_SNPs_59470 0 0 5 DDX24 POSTAR2 ENCODE chr17:40462529-40462557
64251 chr19 14024096 14024096 1 + G C HNSC 14024092 + 14024072 14024112 41 CTGGAGACAGCGCCAAGATGCGGCGCTACGATCGGGGGCTT CTGGAGACAGCGCCAAGATGCGGCCCTACGATCGGGGGCTT < 41bp 0.772171976780656 0.490213871501963 0.83709204 0.2510609 prediction 0.544343953561312 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14024092 chr19:14024096 nonsynonymous SNV 0.975 4 25 hm5C_associated_SNPs_59472 0 0 1 DDX24 POSTAR2 ENCODE chr19:14024087-14024116
64251 chr5 14693112 14693112 1 + G T SARC 14693110 + 14693090 14693130 41 CGCTCATTGCTGAGGACGATCGGCACTATAACATCCCCGTC CGCTCATTGCTGAGGACGATCGTCACTATAACATCCCCGTC < 41bp 0.826578859365732 0.554409618680292 0.22885922 0.054721177 prediction 0.544338481370881 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14693110 chr5:14693112 synonymous SNV . 0 23 hm5C_associated_SNPs_59473 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:14693102-14693132
64251 chr1 151196730 151196730 1 + G T LUSC 151196727 + 151196707 151196747 41 TTTTTCCCCCCTAGCAGCATCTGGAATCAAGAGACCCATGG TTTTTCCCCCCTAGCAGCATCTGTAATCAAGAGACCCATGG < 41bp 0.772132845804477 0.40127938676451 0.086084485 0.027790487 prediction 0.544265691608954 Functional Loss - PIP5K1A ENSG00000143398 CDS Human protein_coding chr1:151196727 chr1:151196730 nonsynonymous SNV 0.709 1 24 hm5C_associated_SNPs_59480 0 0 16 U2AF2 POSTAR2 GSE61603,GSM1509288 chr1:151196720-151196740
64251 chr20 62505056 62505056 1 + G T LUSC 62505054 + 62505034 62505074 41 TTGTCACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC TTGTCACTCTGCGCCAGGTCCTTGCAGCCAAGGAGAGGCAC < 41bp 0.772126115422824 0.446984118271097 0.3523919 0.07134578 prediction 0.544252230845648 Functional Loss - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62505054 chr20:62505056 synonymous SNV . 0 23 hm5C_associated_SNPs_59482 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:62505032-62505062
64251 chr19 34869895 34869895 1 + C T SKCM 34869893 + 34869873 34869913 41 AGACGGCGAAGGAGTGGTTTCTCCAGGCGGCCAAGGATGTG AGACGGCGAAGGAGTGGTTTCTTCAGGCGGCCAAGGATGTG < 41bp 0.807157520456088 0.535061569734413 0.95544195 0.26496282 prediction 0.544191901443351 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34869893 chr19:34869895 synonymous SNV . 0 23 hm5C_associated_SNPs_59484 0 0 4 METAP2 POSTAR2 ENCODE chr19:34869838-34869896
64251 chr1 3379816 3379816 1 + A T UCEC 3379812 + 3379792 3379832 41 CGCCTTCCAGCCCCAGGTCCCGGCACCCCCACAGCCTCGGC CGCCTTCCAGCCCCAGGTCCCGGCTCCCCCACAGCCTCGGC < 41bp 0.81460767128537 0.542548776525451 0.5844276 0.36354327 prediction 0.544117789519838 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3379812 chr1:3379816 synonymous SNV . 0 25 hm5C_associated_SNPs_59489 0 0 1 EIF3H POSTAR2 ENCODE chr1:3379786-3379857
64251 chr20 43108748 43108748 1 + G T UCEC 43108746 + 43108726 43108766 41 GGGCTATGTGTGCTCACTGACAGAAGACCTGGTCACCAAAG GGGCTATGTGTGCTCACTGACATAAGACCTGGTCACCAAAG < 41bp 0.772044163814847 0.443282909025813 0.8662533 0.32463685 prediction 0.544088327629694 Functional Loss - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43108746 chr20:43108748 stopgain 0.972 1 23 hm5C_associated_SNPs_59491 0 0 1 DDX3X POSTAR2 ENCODE chr20:43108716-43108823
64251 chr13 26828866 26828866 1 + G T BLCA 26828863 + 26828843 26828883 41 ACGAGGGCTGCAAAGTTGGCCGAGGCACTTATGGTCACGTC ACGAGGGCTGCAAAGTTGGCCGATGCACTTATGGTCACGTC < 41bp 0.772042928026519 0.397038540032743 0.39154115 0.08691138 prediction 0.544085856053038 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26828863 chr13:26828866 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_59493 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr13:26828839-26828886
64251 chr5 118407331 118407331 1 + A C SKCM 118407327 + 118407307 118407347 41 GACCACTGCTTCTCCGTGGGCAGCATTGGCGACCAGCGCTT GACCACTGCTTCTCCGTGGGCAGCCTTGGCGACCAGCGCTT < 41bp 0.771987207870944 0.412716011398728 0.09798792 0.10512656 prediction 0.543974415741887 Functional Loss - DMXL1 ENSG00000172869 CDS Human protein_coding chr5:118407327 chr5:118407331 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_59498 0 0 6 DDX3X POSTAR2 ENCODE chr5:118407269-118407352
64251 chr1 146766124 146766124 1 + C T UCEC 146766122 + 146766102 146766142 41 CTTCCACGTATTGGACATGCCACGAAAGGTTTTAACTGGTA CTTCCACGTATTGGACATGCCATGAAAGGTTTTAACTGGTA < 41bp 0.778944461155065 0.507002739782806 0.041867286 0.072003365 prediction 0.543883442744519 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146766122 chr1:146766124 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_59504 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:146766108-146766126
64251 chr6 47541867 47541867 1 + A T UCEC 47541863 + 47541843 47541883 41 AAATGTGAGTGAAACTGCATCTGGATCAGTTACACAGCCAA AAATGTGAGTGAAACTGCATCTGGTTCAGTTACACAGCCAA < 41bp 0.771937170891085 0.459868205756622 0.3232885 0.2301453 prediction 0.543874341782171 Functional Loss - CD2AP ENSG00000198087 CDS Human protein_coding chr6:47541863 chr6:47541867 synonymous SNV . 0 25 hm5C_associated_SNPs_59507 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:47541809-47541968
64251 chr15 91184414 91184414 1 + C T rs200743244 91184412 + 91184392 91184432 41 TATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGG TATTCCAACTGCGGGAGTCTCCTGAACACCATCCTGCCAGG < 41bp 0.771903415933606 0.492072626849191 0.4279181 0.30495018 prediction 0.543806831867212 Functional Loss - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91184412 chr15:91184414 nonsynonymous SNV 0.006 4 23 hm5C_associated_SNPs_59512 0 0 1 YBX3 POSTAR2 ENCODE chr15:91184359-91184433
64251 chr1 153615741 153615741 1 + C T LUSC 153615739 + 153615719 153615759 41 AGGTGGACGAGCCGTAGCTCCCCGAATGGGCTTAAGAAGAG AGGTGGACGAGCCGTAGCTCCCTGAATGGGCTTAAGAAGAG < 41bp 0.774868194901109 0.502991660451612 0.055083454 0.029596955 prediction 0.543753068898994 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153615739 chr1:153615741 stopgain 1.000 1 23 hm5C_associated_SNPs_59513 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:153615703-153615754
64251 chr17 65936603 65936603 1 + C T SKCM 65936601 + 65936581 65936621 41 ATCATCAGGGGGCAGCCTGTCTCCACTGCAGTCTCCGCCCC ATCATCAGGGGGCAGCCTGTCTTCACTGCAGTCTCCGCCCC < 41bp 0.781749450403465 0.509882321115536 0.939026 0.04878354 prediction 0.543734258575857 Functional Loss - BPTF ENSG00000171634 CDS Human protein_coding chr17:65936601 chr17:65936603 nonsynonymous SNV 0.674 3 23 hm5C_associated_SNPs_59515 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:65936569-65936606
64251 chrX 101911404 101911404 1 + G T LUAD 101911401 + 101911381 101911421 41 TCTGGGAAGAAGAGGCCAGTCCGGAGGCAGTGGCAGGAGTC TCTGGGAAGAAGAGGCCAGTCCGTAGGCAGTGGCAGGAGTC < 41bp 0.771862264278314 0.389920409072072 0.89079976 0.30833083 prediction 0.543724528556627 Functional Loss - GPRASP1 ENSG00000198932 CDS Human protein_coding chrX:101911401 chrX:101911404 stopgain 0.517 0 24 hm5C_associated_SNPs_59516 0 0 1 SLTM POSTAR2 ENCODE chrX:101911375-101911430
64251 chr3 10268066 10268066 1 + G T STAD 10268063 + 10268043 10268083 41 TGTTCTCTCCAGGTGTTGGCCGAGGTCCTCACGGGCATCCC TGTTCTCTCCAGGTGTTGGCCGATGTCCTCACGGGCATCCC < 41bp 0.771856529719357 0.366562522327123 0.88324344 0.36759737 prediction 0.543713059438714 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10268063 chr3:10268066 nonsynonymous SNV 0.958 3 24 hm5C_associated_SNPs_59518 0 0 1 SF3A3 POSTAR2 ENCODE chr3:10268013-10268070
64251 chr1 28563398 28563398 1 + A T rs116668731 28563394 + 28563374 28563414 41 TCTACGCTCTCCTTCCTCGCCAGCACGCCTTAGCTTTGCAA TCTACGCTCTCCTTCCTCGCCAGCTCGCCTTAGCTTTGCAA < 41bp 0.798868794106914 0.52701654699934 0.049393505 0.080087245 prediction 0.543704494215147 Functional Loss - ATPIF1 ENSG00000130770 UTR3 Human protein_coding chr1:28563394 chr1:28563398 . . 0 25 hm5C_associated_SNPs_59519 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:28563365-28563442
64251 chr17 73258639 73258639 1 + G C KIRC 73258635 + 73258615 73258655 41 TTCAAGGATCCCTTGATTGACAAGGAATATTATCGCAAGCC TTCAAGGATCCCTTGATTGACAAGCAATATTATCGCAAGCC < 41bp 0.771824707650958 0.496552691575279 0.4608238 0.11720666 prediction 0.543649415301916 Functional Loss - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73258635 chr17:73258639 nonsynonymous SNV 0.460 0 25 hm5C_associated_SNPs_59529 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:73258585-73258665
64251 chr12 124181004 124181004 1 + G T LAML 124181002 + 124180982 124181022 41 GTCCGAGCTCTAAATATCAACAGGATGAATAATGTCACGAC GTCCGAGCTCTAAATATCAACATGATGAATAATGTCACGAC < 41bp 0.867210128492176 0.595392966009579 0.42210713 0.08531058 prediction 0.543634324965192 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124181002 chr12:124181004 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_59531 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:124180988-124181015
64251 chr6 158487630 158487630 1 + C T COAD 158487628 + 158487608 158487648 41 CGGAGCTGACAGACTGGCTGCTCGACTCGCCCCAGCTCTCG CGGAGCTGACAGACTGGCTGCTTGACTCGCCCCAGCTCTCG < 41bp 0.771815698185116 0.499525479593105 0.10862306 0.11856535 prediction 0.543631396370232 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158487628 chr6:158487630 synonymous SNV . 0 23 hm5C_associated_SNPs_59532 0 0 7 EFTUD2 POSTAR2 ENCODE chr6:158487613-158487687
64251 chr11 116703640 116703640 1 + G C rs5128 116703636 + 116703616 116703656 41 AGTCCACCTGCCTATCCATCCTGCGAGCTCCTTGGGTCCTG AGTCCACCTGCCTATCCATCCTGCCAGCTCCTTGGGTCCTG < 41bp 0.781956310220522 0.510167829099586 0.26468736 0.18017802 prediction 0.543576962241871 Functional Loss - APOC3 ENSG00000110245 UTR3 Human protein_coding chr11:116703636 chr11:116703640 . . 0 25 hm5C_associated_SNPs_59535 0 1 6 DDX55 POSTAR2 ENCODE chr11:116703614-116703683
64251 chr7 99689334 99689334 1 + G T UCEC 99689331 + 99689311 99689351 41 ATCACCAAAACGTGCAACACCATGAACCAGTTTGTGAACAA ATCACCAAAACGTGCAACACCATTAACCAGTTTGTGAACAA < 41bp 0.77178605521442 0.400521198927185 0.03978145 0.06789446 prediction 0.54357211042884 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99689331 chr7:99689334 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_59536 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99689317-99689385
64251 chr5 434671 434671 1 + A T LUAD 434667 + 434647 434687 41 GGGAGGGCCACTGCTGGGCGCAGCAGGGAGCTGACCCCTTT GGGAGGGCCACTGCTGGGCGCAGCTGGGAGCTGACCCCTTT < 41bp 0.807048318498497 0.535264066992824 0.8408681 0.54207486 prediction 0.543568503011347 Functional Loss - AHRR ENSG00000063438 CDS Human protein_coding chr5:434667 chr5:434671 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_59537 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:434669-434711
64251 chr10 23408279 23408279 1 + G T LUAD 23408277 + 23408257 23408297 41 CACTGGGTGGCCTTCGTTTTCCGAGGCTCATGGTACGTCTG CACTGGGTGGCCTTCGTTTTCCTAGGCTCATGGTACGTCTG < 41bp 0.771775895815892 0.421789932043122 0.92313486 0.7568048 prediction 0.543551791631783 Functional Loss - MSRB2 ENSG00000148450 CDS Human protein_coding chr10:23408277 chr10:23408279 stopgain 0.942 1 23 hm5C_associated_SNPs_59538 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:23408272-23408334
64251 chr4 84377256 84377256 1 + G T BLCA 84377254 + 84377234 84377274 41 GCCGCTGTGGTTGCTGTTTGCGGTGGTCTAGGGAGGAAGAA GCCGCTGTGGTTGCTGTTTGCGTTGGTCTAGGGAGGAAGAA < 41bp 0.865871231564502 0.594102913785115 0.89500034 0.1578834 prediction 0.543536635558773 Functional Loss - MRPS18C ENSG00000163319 CDS Human protein_coding chr4:84377254 chr4:84377256 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_59539 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:84377237-84377268
64251 chr7 137776586 137776586 1 + G T BLCA 137776583 + 137776563 137776603 41 GGACACTCAGGGTCCTCCAGCTAGATTATGTGGATCTTTAC GGACACTCAGGGTCCTCCAGCTATATTATGTGGATCTTTAC < 41bp 0.771757527460263 0.396395365071697 0.11368409 0.11207205 prediction 0.543515054920527 Functional Loss - AKR1D1 ENSG00000122787 CDS Human protein_coding chr7:137776583 chr7:137776586 nonsynonymous SNV 0.014 4 24 hm5C_associated_SNPs_59542 0 0 1 GRWD1 POSTAR2 ENCODE chr7:137776513-137776637
64251 chr17 60501347 60501347 1 + G T HNSC 60501345 + 60501325 60501365 41 GAAGCCGGTTCCTGAGAGATCCGGCGCGCGTCTTCCACCAC GAAGCCGGTTCCTGAGAGATCCTGCGCGCGTCTTCCACCAC < 41bp 0.771750793284072 0.42336951041633 0.8061563 0.20429465 prediction 0.543501586568144 Functional Loss - METTL2A ENSG00000087995 CDS Human protein_coding chr17:60501345 chr17:60501347 synonymous SNV . 0 23 hm5C_associated_SNPs_59543 0 0 1 DDX3X POSTAR2 ENCODE chr17:60501268-60501390
64251 chr15 42821936 42821936 1 + G T THCA 42821934 + 42821914 42821954 41 TGACTCAAGTGGGCAGTATCCTGGGAAATCTAAAAGACATG TGACTCAAGTGGGCAGTATCCTTGGAAATCTAAAAGACATG < 41bp 0.84358559228187 0.571835220380089 0.72293407 0.057338238 prediction 0.543500743803563 Functional Loss - SNAP23 ENSG00000092531 CDS Human protein_coding chr15:42821934 chr15:42821936 synonymous SNV . 0 23 hm5C_associated_SNPs_59544 0 0 3 GRWD1 POSTAR2 ENCODE chr15:42821870-42822017
64251 chr19 44739572 44739572 1 + G T LUAD 44739570 + 44739550 44739590 41 TCTTATAGATGCGACAGTTGCGGCAAGGGATTCAGTAGCAG TCTTATAGATGCGACAGTTGCGTCAAGGGATTCAGTAGCAG < 41bp 0.843552437075774 0.571808717570993 0.38877833 0.115840614 prediction 0.543487439009563 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739570 chr19:44739572 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_59546 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44739535-44739600
64251 chr2 241508204 241508204 1 + G C rs140598905 241508203 + 241508183 241508223 41 CCTGGTGCTCGAGCTGTGCGCGCTGCGGCCCGCGCCCCGCG CCTGGTGCTCGAGCTGTGCGCCCTGCGGCCCGCGCCCCGCG < 41bp 0.804847743921411 0.533106254218558 0.49226704 0.12514907 prediction 0.543482979405706 Functional Loss - RNPEPL1 ENSG00000142327 UTR5 Human protein_coding chr2:241508203 chr2:241508204 . . 0 22 hm5C_associated_SNPs_59547 0 0 2 DDX3X POSTAR2 ENCODE chr2:241508173-241508231
64251 chr1 46159019 46159019 1 + G T UCEC 46159017 + 46158997 46159037 41 CAGCGTATATGAGCAAGACACAGTGCTATCATACATCCCCC CAGCGTATATGAGCAAGACACATTGCTATCATACATCCCCC < 41bp 0.771737243261584 0.444224873315373 0.015338689 0.0121307075 prediction 0.543474486523167 Functional Loss - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46159017 chr1:46159019 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_59548 0 0 3 IGF2BP1 POSTAR2 ENCODE chr1:46158941-46159033
64251 chr1 65721074 65721074 1 + G C rs536263231 65721073 + 65721053 65721093 41 GCGGACTGGGAAGGCCTCTCCGAGGCATTGCAAGTCAGCGG GCGGACTGGGAAGGCCTCTCCCAGGCATTGCAAGTCAGCGG < 41bp 0.817922374166984 0.546196396477435 0.8928887 0.8032086 prediction 0.543451955379098 Functional Loss - AK4;DNAJC6 ENSG00000116675 intronic Human protein_coding chr1:65721073 chr1:65721074 . . 0 22 hm5C_associated_SNPs_59550 0 0 3 IGF2BP2 POSTAR2 ENCODE chr1:65721033-65721090
64251 chr15 65157620 65157620 1 + C T PAAD 65157618 + 65157598 65157638 41 GCAGGCTTCTGGGCCACCTGCTCCAGGCACAGTGCAGGTCT GCAGGCTTCTGGGCCACCTGCTTCAGGCACAGTGCAGGTCT < 41bp 0.777344634987092 0.505621270185261 0.9269279 0.37638193 prediction 0.543446729603664 Functional Loss - PLEKHO2 ENSG00000241839 CDS Human protein_coding chr15:65157618 chr15:65157620 nonsynonymous SNV 0.022 0 23 hm5C_associated_SNPs_59552 0 0 1 EIF3H POSTAR2 ENCODE chr15:65157592-65157637
64251 chr19 44611651 44611651 1 + C T SKCM 44611649 + 44611629 44611669 41 GGAGGTTGGATCTTGACTTTCACCAGCGCGTCCATACAGGA GGAGGTTGGATCTTGACTTTCATCAGCGCGTCCATACAGGA < 41bp 0.771779277191219 0.500060805999057 0.021368712 0.05685991 prediction 0.543436942384323 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611649 chr19:44611651 synonymous SNV . 0 23 hm5C_associated_SNPs_59553 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44611637-44611664
64251 chr16 30096341 30096341 1 + G T COAD 30096339 + 30096319 30096359 41 AGGCTGCTCCCCAAGAGACACGGGGCATCCCCTCCAAGAAG AGGCTGCTCCCCAAGAGACACGTGGCATCCCCTCCAAGAAG < 41bp 0.86407466884232 0.592359007203752 0.87651706 0.21386048 prediction 0.543431323277135 Functional Loss - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096339 chr16:30096341 synonymous SNV . 0 23 hm5C_associated_SNPs_59554 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30096303-30096356
64251 chr3 183897982 183897982 1 + G T UCEC 183897980 + 183897960 183898000 41 TTCTAGACTTTGGCTACCCACAGAATTCCGAGACAGGCGCG TTCTAGACTTTGGCTACCCACATAATTCCGAGACAGGCGCG < 41bp 0.803787390198473 0.532078941111263 0.43305147 0.13697445 prediction 0.543416898174419 Functional Loss - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183897980 chr3:183897982 nonsynonymous SNV 0.990 4 23 hm5C_associated_SNPs_59556 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:183897946-183897997
64251 chr16 30939106 30939106 1 + G T SARC 30939104 + 30939084 30939124 41 GGCCGCCGTAGGGCCGACAACGGCGAGGAGGGCGCCAGCTT GGCCGCCGTAGGGCCGACAACGTCGAGGAGGGCGCCAGCTT < 41bp 0.870921466859919 0.599216145283199 0.87615114 0.52698314 prediction 0.543410643153438 Functional Loss - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30939104 chr16:30939106 nonsynonymous SNV 0.921 1 23 hm5C_associated_SNPs_59558 0 0 3 AARS POSTAR2 ENCODE chr16:30939082-30939127
64251 chr2 29383260 29383260 1 + C T KIRC 29383258 + 29383238 29383278 41 GTTGCGAGGGGGAACTCCGCCTCGGAGAGAGAGTGTTAGTG GTTGCGAGGGGGAACTCCGCCTTGGAGAGAGAGTGTTAGTG < 41bp 0.783080879578807 0.511383800986642 0.11957887 0.029154718 prediction 0.543394157184329 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29383258 chr2:29383260 synonymous SNV . 0 23 hm5C_associated_SNPs_59560 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:29383228-29383264
64251 chr11 123480966 123480966 1 + C T HNSC 123480964 + 123480944 123480984 41 TAGATGCCGAAGTCCTCACCCACGACGTGCCCTACCATGAC TAGATGCCGAAGTCCTCACCCATGACGTGCCCTACCATGAC < 41bp 0.804297103828256 0.532600211883472 0.051762283 0.10647398 prediction 0.543393783889568 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123480964 chr11:123480966 synonymous SNV . 0 23 hm5C_associated_SNPs_59561 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:123480929-123480967
64251 chr12 51173961 51173961 1 + G C HNSC 51173957 + 51173937 51173977 41 TTCCCACAAGAGTACCACGTCAGAGACAGCACCTCAACCTG TTCCCACAAGAGTACCACGTCAGACACAGCACCTCAACCTG < 41bp 0.771694897975919 0.491551522989873 0.37443805 0.03286606 prediction 0.543389795951839 Functional Loss - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51173957 chr12:51173961 nonsynonymous SNV 0.982 2 25 hm5C_associated_SNPs_59562 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:51173943-51173963
64251 chr19 39963709 39963709 1 + C T SKCM 39963707 + 39963687 39963727 41 ACGGCCCGTGTGGAGCTGCACTCCACCTGCCAGACCATCTC ACGGCCCGTGTGGAGCTGCACTTCACCTGCCAGACCATCTC < 41bp 0.803157773665745 0.531463585474721 0.8749319 0.12663811 prediction 0.543388376382049 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963707 chr19:39963709 nonsynonymous SNV 0.835 4 23 hm5C_associated_SNPs_59563 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr19:39963690-39963715
64251 chr4 56737333 56737333 1 + G C LGG 56737329 + 56737309 56737349 41 GAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCAC GAAGGAGATCTTGCTTCTTCCAGACGCATTGAGGCCTGCAC < 41bp 0.771687509528385 0.498988700376499 0.90017426 0.84367883 prediction 0.543375019056771 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56737329 chr4:56737333 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_59567 0 0 1 PRPF8 POSTAR2 ENCODE chr4:56737142-56737336
64251 chr5 139574218 139574218 1 + G T STAD 139574216 + 139574196 139574236 41 ACGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAAACCACA ACGGCTGGCAGGGTGGACCTCATGAGCCTCCTAAAACCACA < 41bp 0.868399955708751 0.596739514377979 0.8290022 0.3376392 prediction 0.543320882661543 Functional Loss - CYSTM1 ENSG00000120306 CDS Human protein_coding chr5:139574216 chr5:139574218 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_59573 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:139574181-139574227
64251 chr12 100904587 100904587 1 + G T LIHC 100904585 + 100904565 100904605 41 CAGAACAAGTGGCAGGTCCTCTGGGACAGAACCTGGAAGTG CAGAACAAGTGGCAGGTCCTCTTGGACAGAACCTGGAAGTG < 41bp 0.860055878901466 0.588398471549988 0.7014774 0.05968365 prediction 0.543314814702955 Functional Loss - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100904585 chr12:100904587 synonymous SNV . 0 23 hm5C_associated_SNPs_59575 0 0 2 GRWD1 POSTAR2 ENCODE chr12:100904560-100904609
64251 chr16 31121091 31121091 1 + C T SKCM 31121089 + 31121069 31121109 41 TTCATCATTGGCTGCAACCCCACCATACTGCACGTGGTAAG TTCATCATTGGCTGCAACCCCATCATACTGCACGTGGTAAG < 41bp 0.771642920427561 0.498900389711928 0.07742825 0.11112434 prediction 0.543285840855121 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121089 chr16:31121091 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_59576 0 0 4 BUD13 POSTAR2 ENCODE chr16:31121058-31121168
64251 chr14 53019985 53019985 1 + G C rs539628213 53019984 + 53019964 53020004 41 CGCTGCAGCCTCAGGCGCCGCGGTGCCGGGCTCCGTGCAGT CGCTGCAGCCTCAGGCGCCGCCGTGCCGGGCTCCGTGCAGT < 41bp 0.804134234090979 0.53249563801651 0.59711933 0.41643566 prediction 0.543277192148938 Functional Loss - GPR137C ENSG00000180998 CDS Human protein_coding chr14:53019984 chr14:53019985 synonymous SNV . 0 22 hm5C_associated_SNPs_59578 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:53019983-53020006
64251 chr2 36764578 36764578 1 + A T LUSC 36764574 + 36764554 36764594 41 GAGCGGTGGGACCTTGACAGCTGCACCCACTGCTACTGCCT GAGCGGTGGGACCTTGACAGCTGCTCCCACTGCTACTGCCT < 41bp 0.771629154477247 0.436568167706645 0.26893908 0.42222333 prediction 0.543258308954494 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36764574 chr2:36764578 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_59579 0 0 1 RPS3 POSTAR2 ENCODE chr2:36764573-36764611
64251 chr14 74961586 74961586 1 + G T LUSC 74961583 + 74961563 74961603 41 GACTCTGATAGCTTGGCCTTCGTGAAAGGGGCCCAGGTGGA GACTCTGATAGCTTGGCCTTCGTTAAAGGGGCCCAGGTGGA < 41bp 0.771623169347581 0.396922032650074 0.5373662 0.26572168 prediction 0.543246338695162 Functional Loss - ISCA2 ENSG00000165898 CDS Human protein_coding chr14:74961583 chr14:74961586 synonymous SNV . 0 24 hm5C_associated_SNPs_59580 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:74961583-74961606
64251 chr12 21680708 21680708 1 + G C UCEC 21680704 + 21680684 21680724 41 CAGAGCCGGAGAAAGGACCTCTCCGACCGGCCACTGCCGGG CAGAGCCGGAGAAAGGACCTCTCCCACCGGCCACTGCCGGG < 41bp 0.793873783683148 0.52226728216358 0.55729234 0.1348691 prediction 0.543213003039135 Functional Loss - SPX ENSG00000134548 CDS Human protein_coding chr12:21680704 chr12:21680708 nonsynonymous SNV 0.110 3 25 hm5C_associated_SNPs_59583 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr12:21680706-21680726
64251 chr17 48539889 48539889 1 + C T SKCM 48539887 + 48539867 48539907 41 CACGGCAGCATCTGGACCAGCTCCAATACAACCAGCAGTTC CACGGCAGCATCTGGACCAGCTTCAATACAACCAGCAGTTC < 41bp 0.771603192909927 0.483348545640964 0.8352867 0.09371871 prediction 0.543206385819853 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48539887 chr17:48539889 synonymous SNV . 0 23 hm5C_associated_SNPs_59585 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48539888-48539982
64251 chr12 14591145 14591145 1 + C T UCEC 14591143 + 14591123 14591163 41 GACTTTGGCAGAATTGAAAACACGAGTGGAAAAGATTGAAT GACTTTGGCAGAATTGAAAACATGAGTGGAAAAGATTGAAT < 41bp 0.779937598522392 0.508349015855751 0.088590086 0.11912736 prediction 0.543177165333283 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14591143 chr12:14591145 stopgain 0.998 1 23 hm5C_associated_SNPs_59586 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14591103-14591181
64251 chr14 24771456 24771456 1 + C T SKCM 24771454 + 24771434 24771474 41 CTAGTCCCCTACTGCTATTTCTCCGAGATCAGACGAGTTCC CTAGTCCCCTACTGCTATTTCTTCGAGATCAGACGAGTTCC < 41bp 0.771577522725795 0.494496941570011 0.119693905 0.07237771 prediction 0.54315504545159 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771454 chr14:24771456 synonymous SNV . 0 23 hm5C_associated_SNPs_59587 0 0 2 FASTKD2 POSTAR2 ENCODE chr14:24771445-24771506
64251 chr5 137721936 137721936 1 + G T PRAD 137721933 + 137721913 137721953 41 ATGCCAGTGGAGAGCCAGGGCTGGATCAGAGAGCCAAGCAG ATGCCAGTGGAGAGCCAGGGCTGTATCAGAGAGCCAAGCAG < 41bp 0.771575489930924 0.408684007629865 0.3865747 0.113806784 prediction 0.543150979861848 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137721933 chr5:137721936 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_59588 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:137721906-137721947
64251 chr16 3187476 3187476 1 + G T UCEC 3187474 + 3187454 3187494 41 GGCCTCATGAGGCCTTCAGCCAGCTCTGGGAGCTCTGCTGC GGCCTCATGAGGCCTTCAGCCATCTCTGGGAGCTCTGCTGC < 41bp 0.771571867095251 0.430730031793156 0.8733908 0.3785404 prediction 0.543143734190502 Functional Loss - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3187474 chr16:3187476 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_59589 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:3187470-3187510
64251 chr10 3143132 3143132 1 + G T LUAD 3143129 + 3143109 3143149 41 GCAGGTGCTGTAAGGGGTGACTGGAGGGAGAAGCCTGGCTG GCAGGTGCTGTAAGGGGTGACTGTAGGGAGAAGCCTGGCTG < 41bp 0.892537667227269 0.620965850317503 0.8509176 0.21877551 prediction 0.543143633819531 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3143129 chr10:3143132 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_59590 0 0 1 EIF4G2 POSTAR2 ENCODE chr10:3143117-3143190
64251 chr9 140147723 140147723 1 - C A rs200290581 140147726 - 140147706 140147746 41 CCATGGTTCCACTCGGTGGCCGGGCCAAGCAGGTTGTGCCC CCATGGTTCCACTCGGTGGCCGGTCCAAGCAGGTTGTGCCC < 41bp 0.77156173483464 0.388338915730879 0.9006468 0.68709016 prediction 0.543123469669279 Functional Loss - STPG3 ENSG00000197768 CDS Human protein_coding chr9:140147726 chr9:140147723 synonymous SNV . 0 24 hm5C_associated_SNPs_59594 0 0 3 AARS POSTAR2 ENCODE chr9:140147719-140147761
64251 chr15 44776530 44776530 1 + C T HNSC 44776528 + 44776508 44776548 41 AAAACCTAACAAACAGATATCTCGAGTAAGACGGAAAAGTC AAAACCTAACAAACAGATATCTTGAGTAAGACGGAAAAGTC < 41bp 0.794071558485223 0.522514097788034 0.20893836 0.09383345 prediction 0.543114921394378 Functional Loss - CTDSPL2 ENSG00000137770 CDS Human protein_coding chr15:44776528 chr15:44776530 stopgain 1.000 1 23 hm5C_associated_SNPs_59595 0 0 4 GRWD1 POSTAR2 ENCODE chr15:44776421-44776540
64251 chr1 156845906 156845906 1 + C T SKCM 156845904 + 156845884 156845924 41 TCAAGCGCCGGGACATCGTGCTCAAGTGGGAGCTGGGGGAG TCAAGCGCCGGGACATCGTGCTTAAGTGGGAGCTGGGGGAG < 41bp 0.784770614454174 0.513222109368092 0.14930949 0.20373434 prediction 0.543097010172164 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156845904 chr1:156845906 synonymous SNV . 0 23 hm5C_associated_SNPs_59597 0 0 1 DDX24 POSTAR2 ENCODE chr1:156845904-156845973
64251 chr19 50550296 50550296 1 + A T HNSC 50550292 + 50550272 50550312 41 AGCCGCCATCAGCGTGTACACAACAAGCAGCAATACTGCCT AGCCGCCATCAGCGTGTACACAACTAGCAGCAATACTGCCT < 41bp 0.771537795631889 0.466844293846246 0.40835887 0.22422227 prediction 0.543075591263778 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50550292 chr19:50550296 stopgain 0.048 0 25 hm5C_associated_SNPs_59598 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50550287-50550316
64251 chr3 172046847 172046847 1 + C T COAD 172046845 + 172046825 172046865 41 GTACACATTCAGGCTGGCCGCTCGAAACGACATTGGTACCA GTACACATTCAGGCTGGCCGCTTGAAACGACATTGGTACCA < 41bp 0.771524617212583 0.492175374354389 0.32335117 0.23358536 prediction 0.543049234425165 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172046845 chr3:172046847 stopgain 0.884 1 23 hm5C_associated_SNPs_59603 0 0 4 DDX24 POSTAR2 ENCODE chr3:172046741-172046859
64251 chr13 88328110 88328110 1 + A T GBM 88328106 + 88328086 88328126 41 CCTTCCTTGGCTTGGAGAACCTGGAGTACCTACAGGTCGAT CCTTCCTTGGCTTGGAGAACCTGGTGTACCTACAGGTCGAT < 41bp 0.828179487135137 0.55667278266493 0.66558427 0.6943462 prediction 0.543013408940415 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328106 chr13:88328110 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_59607 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:88328055-88328110
64251 chr19 4472312 4472312 1 + A C rs189680983 4472308 + 4472288 4472328 41 CGCCGCAGCCGCTACCGCCGCTGCAGCCGCTTTCCGCGGCC CGCCGCAGCCGCTACCGCCGCTGCCGCCGCTTTCCGCGGCC < 41bp 0.884802543701594 0.613298978306951 0.36079293 0.46052602 prediction 0.543007130789286 Functional Loss - HDGFL2 ENSG00000167674 UTR5 Human protein_coding chr19:4472308 chr19:4472312 . . 0 25 hm5C_associated_SNPs_59608 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:4472300-4472320
64251 chr17 7478559 7478559 1 + C T CESC 7478557 + 7478537 7478577 41 GGCCTTGGTCCTAGCACCCACTCGAGAATTGGCTCAGCAGG GGCCTTGGTCCTAGCACCCACTTGAGAATTGGCTCAGCAGG < 41bp 0.786544623146671 0.515053308439217 0.6563983 0.15957057 prediction 0.542982629414908 Functional Loss - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7478557 chr17:7478559 stopgain 0.962 1 23 hm5C_associated_SNPs_59611 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:7478540-7478560
64251 chr7 127230187 127230187 1 + A T BLCA 127230183 + 127230163 127230203 41 AAGAATCTGCTGATGAACTCCAGAAGATGGTGAGTACCCAG AAGAATCTGCTGATGAACTCCAGATGATGGTGAGTACCCAG < 41bp 0.83932078917023 0.567830053792651 0.53035265 0.880185 prediction 0.542981470755159 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127230183 chr7:127230187 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_59612 0 0 3 LIN28B POSTAR2 ENCODE chr7:127230140-127230191
64251 chr5 140589935 140589935 1 + G T BLCA 140589932 + 140589912 140589952 41 GAGACTCGGGCACCAACGCCCAGGTCAACTACTCGCTGCTG GAGACTCGGGCACCAACGCCCAGTTCAACTACTCGCTGCTG < 41bp 0.771465446732056 0.385357697780424 0.91959685 0.3897823 prediction 0.542930893464111 Functional Loss - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589932 chr5:140589935 nonsynonymous SNV 0.441 1 24 hm5C_associated_SNPs_59616 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr19 10221020 10221020 1 + G T rs149310564 10221018 + 10220998 10221038 41 AGATCGGCCCGCGGATGACACTGCAGCTCATCAAGGTCCAG AGATCGGCCCGCGGATGACACTTCAGCTCATCAAGGTCCAG < 41bp 0.870675407676015 0.599229167643998 0.25464666 0.07725403 prediction 0.542892480064033 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10221018 chr19:10221020 synonymous SNV . 0 23 hm5C_associated_SNPs_59617 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10221008-10221032
64251 chr18 48252451 48252451 1 + C T HNSC 48252449 + 48252429 48252469 41 CCCTGAGGACGAGCCCACCTCACAACACCCCTTCCGCATTG CCCTGAGGACGAGCCCACCTCATAACACCCCTTCCGCATTG < 41bp 0.771440148077951 0.495142573812446 0.03860593 0.015687227 prediction 0.542880296155901 Functional Loss - MAPK4 ENSG00000141639 CDS Human protein_coding chr18:48252449 chr18:48252451 stopgain 0.947 1 23 hm5C_associated_SNPs_59618 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:48252441-48252464
64251 chr10 101458321 101458321 1 + C T rs193135919 101458319 + 101458299 101458339 41 GTCAGAAGACAGGTCTGAGTCCCGACAATCCATTTCTGGAT GTCAGAAGACAGGTCTGAGTCCTGACAATCCATTTCTGGAT < 41bp 0.788248923595541 0.516811194773535 0.11024651 0.07439837 prediction 0.542875457644011 Functional Loss - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101458319 chr10:101458321 synonymous SNV . 0 23 hm5C_associated_SNPs_59619 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:101458306-101458326
64251 chr16 29001322 29001322 1 + G T UCEC 29001319 + 29001299 29001339 41 CTCCAGATTACGAGAATCTGCAGGAGCTGAACTGAGGGCCT CTCCAGATTACGAGAATCTGCAGTAGCTGAACTGAGGGCCT < 41bp 0.900277964253182 0.62884086382912 0.9087311 0.5947654 prediction 0.542874200848125 Functional Loss - LAT ENSG00000213658 CDS Human protein_coding chr16:29001319 chr16:29001322 stopgain 0.986 0 24 hm5C_associated_SNPs_59620 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:29001311-29001328
64251 chr17 3628073 3628073 1 + G T LUSC 3628071 + 3628051 3628091 41 ACTGGTGGTGGGAAATGGACCAGAGGGTCCAGGTCTGTCAA ACTGGTGGTGGGAAATGGACCATAGGGTCCAGGTCTGTCAA < 41bp 0.771433944788793 0.430581311474848 0.8107904 0.10570845 prediction 0.542867889577586 Functional Loss - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3628071 chr17:3628073 stopgain 0.000 0 23 hm5C_associated_SNPs_59622 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:3628041-3628082
64251 chr17 37872035 37872035 1 + G T rs4252633 37872032 + 37872012 37872052 41 CTGCAAGGGCTGGGCATCAGCTGGCTGGGGCTGCGCTCACT CTGCAAGGGCTGGGCATCAGCTGTCTGGGGCTGCGCTCACT < 41bp 0.7714297419189 0.378446473663889 0.7091031 0.3177763 prediction 0.5428594838378 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872032 chr17:37872035 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_59623 1 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:37872032-37872049
64251 chr15 40616783 40616783 1 + A C rs8036383 40616779 + 40616759 40616799 41 AGCCCAGAGGCAGGACTTCGCAGCAGGATGGGGTGGAGAGC AGCCCAGAGGCAGGACTTCGCAGCCGGATGGGGTGGAGAGC < 41bp 0.890654059300427 0.619227932760222 0.8737618 0.8706907 prediction 0.542852253080408 Functional Loss - INAFM2 ENSG00000259330 upstream Human protein_coding chr15:40616779 chr15:40616783 . . 0 25 hm5C_associated_SNPs_59624 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr15:40616765-40616791
64251 chr15 79614395 79614395 1 + G T LUAD 79614392 + 79614372 79614412 41 CCCAGACGCATTACCGGCTGCGGGAGGCCCAGGACCGGGCC CCCAGACGCATTACCGGCTGCGGTAGGCCCAGGACCGGGCC < 41bp 0.899730134617134 0.628306754792742 0.9347445 0.78240806 prediction 0.542846759648784 Functional Loss - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79614392 chr15:79614395 stopgain 0.978 1 24 hm5C_associated_SNPs_59625 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:79614382-79614403
64251 chr4 48852092 48852092 1 + C T GBM 48852090 + 48852070 48852110 41 AGGACAAGCACGACGATCTTCACCACCTGGGTAGGCCAGAT AGGACAAGCACGACGATCTTCATCACCTGGGTAGGCCAGAT < 41bp 0.784084758184786 0.512667365915933 0.14602837 0.19661248 prediction 0.542834784537705 Functional Loss - OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48852090 chr4:48852092 nonsynonymous SNV 0.657 0 23 hm5C_associated_SNPs_59627 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:48851976-48852100
64251 chr15 89169751 89169751 1 + G T LUSC 89169748 + 89169728 89169768 41 GCCTGCTCCCGGGAAAGCCTCAGGGCCCTTGCCCAGCAAGT GCCTGCTCCCGGGAAAGCCTCAGTGCCCTTGCCCAGCAAGT < 41bp 0.771412535375463 0.362098982692417 0.9403971 0.773545 prediction 0.542825070750926 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169748 chr15:89169751 nonsynonymous SNV 0.104 0 24 hm5C_associated_SNPs_59628 0 0 1 RBM15 POSTAR2 ENCODE chr15:89169675-89169759
64251 chr14 76455293 76455293 1 + G T UCEC 76455290 + 76455270 76455310 41 GCCGAGAATCACCTCAATGGCAAGAATTCCTCTTTGACTCT GCCGAGAATCACCTCAATGGCAATAATTCCTCTTTGACTCT < 41bp 0.77141050830918 0.427242023318461 0.4602763 0.08454502 prediction 0.54282101661836 Functional Loss - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76455290 chr14:76455293 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_59629 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:76455275-76455305
64251 chr10 101567916 101567916 1 + C T SKCM 101567914 + 101567894 101567934 41 GATGCACAAAAGGCCTTCACCTCCATTACCCTCTTCAATAT GATGCACAAAAGGCCTTCACCTTCATTACCCTCTTCAATAT < 41bp 0.811352479698189 0.539985808191281 0.9478152 0.061826468 prediction 0.542733343013816 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101567914 chr10:101567916 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_59638 0 0 1 RBM15 POSTAR2 ENCODE chr10:101567868-101567924
64251 chrX 47069479 47069479 1 + C T UCEC 47069477 + 47069457 47069497 41 CACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCT CACCACTGGCACACCCAGTACTTGAACAACATCCGGCAGCT < 41bp 0.801723993084495 0.530382673525814 0.9018315 0.11258298 prediction 0.542682639117363 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47069477 chrX:47069479 nonsynonymous SNV 0.991 0 23 hm5C_associated_SNPs_59648 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:47069460-47069496
64251 chr15 91016196 91016196 1 + G T UCEC 91016194 + 91016174 91016214 41 GTTCGACAGGAATTCCGATCCAGGATGAATTTCCTGAAGAA GTTCGACAGGAATTCCGATCCATGATGAATTTCCTGAAGAA < 41bp 0.848565064938105 0.577239214294524 0.76872754 0.24551865 prediction 0.542651701287163 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91016194 chr15:91016196 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_59652 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91016169-91016200
64251 chr17 53392612 53392612 1 + A T SKCM 53392608 + 53392588 53392628 41 GTCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATT GTCAGCTGTTGCCAGCAAACCGCATTACACCAAGTCCCATT < 41bp 0.771316379610074 0.438883801383742 0.10697809 0.22628939 prediction 0.542632759220148 Functional Loss - HLF ENSG00000108924 CDS Human protein_coding chr17:53392608 chr17:53392612 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_59654 0 0 2 IGF2BP3 POSTAR2 ENCODE chr17:53392587-53392612
64251 chr6 32138254 32138254 1 - C A LUAD 32138257 - 32138237 32138277 41 CTTCATCGACCGGAAGCGCACGGGGGATGCCATCAGTGTCA CTTCATCGACCGGAAGCGCACGGTGGATGCCATCAGTGTCA < 41bp 0.771311287612788 0.476639998883779 0.93653077 0.27453816 prediction 0.542622575225577 Functional Loss - AGPAT1 ENSG00000204310 CDS Human protein_coding chr6:32138257 chr6:32138254 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_59656 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32138236-32138256
64251 chr9 115600817 115600817 1 + C T rs192545589 115600815 + 115600795 115600835 41 AGAGAATACGGGCCTGTGTACTCCACATGGAGCGCCTTGGA AGAGAATACGGGCCTGTGTACTTCACATGGAGCGCCTTGGA < 41bp 0.771311245160807 0.472504617757905 0.74923605 0.13526651 prediction 0.542622490321613 Functional Loss - SNX30 ENSG00000148158 CDS Human protein_coding chr9:115600815 chr9:115600817 nonsynonymous SNV 0.917 4 23 hm5C_associated_SNPs_59657 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:115600801-115600820
64251 chr19 50302915 50302915 1 + G T PRAD 50302913 + 50302893 50302933 41 GGGACGTCAGCGTGCGGCAGCGGGCGGCTGACCTCCTCTAC GGGACGTCAGCGTGCGGCAGCGTGCGGCTGACCTCCTCTAC < 41bp 0.771292264030535 0.4196459001349 0.9269043 0.8610051 prediction 0.54258452806107 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302913 chr19:50302915 synonymous SNV . 0 23 hm5C_associated_SNPs_59660 0 0 3 DGCR8 POSTAR2 ENCODE chr19:50302881-50302917
64251 chr16 47694709 47694709 1 + C T LGG 47694707 + 47694687 47694727 41 AATGGAAGGACAAACCCACCCACGAAATTCTTCAAAAACTG AATGGAAGGACAAACCCACCCATGAAATTCTTCAAAAACTG < 41bp 0.774063267800672 0.502784474240486 0.03515911 0.056148887 prediction 0.542557587120372 Functional Loss - PHKB ENSG00000102893 CDS Human protein_coding chr16:47694707 chr16:47694709 synonymous SNV . 0 23 hm5C_associated_SNPs_59664 0 0 2 PRPF8 POSTAR2 ENCODE chr16:47694660-47694813
64251 chr9 35661109 35661109 1 + G C UCEC 35661105 + 35661085 35661125 41 AAGGTGCAGCCAGGCTGTGGCAAAGGGCCCCAGTCACAGCC AAGGTGCAGCCAGGCTGTGGCAAACGGCCCCAGTCACAGCC < 41bp 0.771267925125184 0.488125995279492 0.55509543 0.3820148 prediction 0.542535850250369 Functional Loss - CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661105 chr9:35661109 nonsynonymous SNV 0.042 1 25 hm5C_associated_SNPs_59666 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:35661108-35661109
64251 chr19 42818673 42818673 1 + G T SKCM 42818670 + 42818650 42818690 41 GTGGCCAGCCGTGTACAAGGCAGGGGACAAGGTGAGGGCTG GTGGCCAGCCGTGTACAAGGCAGTGGACAAGGTGAGGGCTG < 41bp 0.910878014170765 0.639619379413942 0.8809546 0.39412928 prediction 0.542517269513644 Functional Loss - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42818670 chr19:42818673 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_59667 0 0 1 BUD13 POSTAR2 ENCODE chr19:42818595-42818676
64251 chr22 32230006 32230006 1 + G C CESC 32230002 + 32229982 32230022 41 TGACTGGGGAAAGGGGTAGACAGGGAGTGTGGGGTGGTCAG TGACTGGGGAAAGGGGTAGACAGGCAGTGTGGGGTGGTCAG < 41bp 0.79605902274713 0.524807697407103 0.81675935 0.6485998 prediction 0.542502650680054 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32230002 chr22:32230006 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_59668 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:32230006-32230025
64251 chr22 50615615 50615615 1 + G T PRAD 50615613 + 50615593 50615633 41 CCTCCGAGCTCAACTTCCTGCTGCAGGAGATCGACAACTGT CCTCCGAGCTCAACTTCCTGCTTCAGGAGATCGACAACTGT < 41bp 0.77123612744567 0.444869743161478 0.121768564 0.14287004 prediction 0.54247225489134 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615613 chr22:50615615 synonymous SNV . 0 23 hm5C_associated_SNPs_59673 0 0 1 YBX3 POSTAR2 ENCODE chr22:50615607-50615662
64251 chr10 51768709 51768709 1 + C T OV 51768707 + 51768687 51768727 41 GCCCCGGAGAATCATGCTGACACCATCGGGAGCGGTAGAGC GCCCCGGAGAATCATGCTGACATCATCGGGAGCGGTAGAGC < 41bp 0.771234844969113 0.495515069760917 0.15544057 0.18253377 prediction 0.542469689938225 Functional Loss - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51768707 chr10:51768709 nonsynonymous SNV 0.115 0 23 hm5C_associated_SNPs_59674 0 0 4 FBL POSTAR2 GSE43666,GSM1067864 chr10:51768705-51768743
64251 chr20 2847185 2847185 1 + A C BLCA 2847181 + 2847161 2847201 41 ACAGATGGGGCCACAGCTGACAAGATTCAACGGGCCAGGGC ACAGATGGGGCCACAGCTGACAAGCTTCAACGGGCCAGGGC < 41bp 0.904236277717911 0.633002680870845 0.5749943 0.39191422 prediction 0.542467193694133 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2847181 chr20:2847185 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_59675 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:2847164-2847192
64251 chr1 78481780 78481780 1 + G T LUAD 78481778 + 78481758 78481798 41 GTAAATGATATTGTGAAACCCGGAATGAGGAGAAGAATTAT GTAAATGATATTGTGAAACCCGTAATGAGGAGAAGAATTAT < 41bp 0.81341722477198 0.542273307700393 0.24835217 0.10834527 prediction 0.542287834143174 Functional Loss - DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78481778 chr1:78481780 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_59691 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:78481767-78481793
64251 chr19 44661342 44661342 1 + G T LUAD 44661340 + 44661320 44661360 41 GTTCAAGTTTTCAGGCCCATCAGGGAGTCCACACTGGAGAG GTTCAAGTTTTCAGGCCCATCATGGAGTCCACACTGGAGAG < 41bp 0.873620166261783 0.602487487650066 0.8651518 0.16619179 prediction 0.542265357223433 Functional Loss - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661340 chr19:44661342 nonsynonymous SNV 0.989 2 23 hm5C_associated_SNPs_59695 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44661331-44661369
64251 chr22 20008711 20008711 1 + G T rs737986 20008708 + 20008688 20008728 41 CCGCTAGTGGCCCGGCCGGCCTGGGCTCGGGGGCTCCGGGC CCGCTAGTGGCCCGGCCGGCCTGTGCTCGGGGGCTCCGGGC < 41bp 0.876980556814805 0.60586434153519 0.73503006 0.115343004 prediction 0.542232430559229 Functional Loss - TANGO2 ENSG00000183597 UTR5 Human protein_coding chr22:20008708 chr22:20008711 . . 0 24 hm5C_associated_SNPs_59698 0 0 1 DDX3X POSTAR2 ENCODE chr22:20008695-20008768
64251 chr13 114174959 114174959 1 + C T COAD 114174957 + 114174937 114174977 41 TTGACTACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAG TTGACTACAGCACCGTGCTCCTTGGCATGCTGGTGACGCAG < 41bp 0.77257165753314 0.501458459719257 0.17090142 0.107868075 prediction 0.542226395627766 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114174957 chr13:114174959 synonymous SNV . 0 23 hm5C_associated_SNPs_59699 0 0 7 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr13:114174946-114174965
64251 chr6 348244 348244 1 + C T SKCM 348242 + 348222 348262 41 ACGTGGGCTTCCAGAGACAGCTCCAGGAGTTTGAGAAGCAT ACGTGGGCTTCCAGAGACAGCTTCAGGAGTTTGAGAAGCAT < 41bp 0.771109709934535 0.485611421262664 0.43782306 0.049076676 prediction 0.542219419869071 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348242 chr6:348244 synonymous SNV . 0 23 hm5C_associated_SNPs_59700 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:348206-348256
64251 chr16 2079600 2079600 1 + G T ACC 2079597 + 2079577 2079617 41 CCCCAGGTGGTGCAAAGGATCAAGGCTGTGGAGGGGCAGAC CCCCAGGTGGTGCAAAGGATCAATGCTGTGGAGGGGCAGAC < 41bp 0.771100912943244 0.378196520028571 0.86936885 0.25434488 prediction 0.542201825886488 Functional Loss - SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2079597 chr16:2079600 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_59702 0 0 2 DDX3X POSTAR2 ENCODE chr16:2079589-2079653
64251 chr3 45533239 45533239 1 + G T UCEC 45533236 + 45533216 45533256 41 AACATCGCGTCTTTCACTGGCAAGGGAGGCCCCCCACTGGC AACATCGCGTCTTTCACTGGCAATGGAGGCCCCCCACTGGC < 41bp 0.771082583401929 0.367142537937568 0.9227145 0.28818715 prediction 0.542165166803859 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45533236 chr3:45533239 nonsynonymous SNV 0.854 1 24 hm5C_associated_SNPs_59705 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:45533220-45533240
64251 chr15 57836782 57836782 1 + G T SKCM 57836779 + 57836759 57836799 41 TCGCGGAGCTGGAGGACCGCCTGGAGAGTGAGGAGAGGTGA TCGCGGAGCTGGAGGACCGCCTGTAGAGTGAGGAGAGGTGA < 41bp 0.893194533331699 0.622135920397596 0.75910914 0.3793849 prediction 0.542117225868206 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57836779 chr15:57836782 stopgain 0.984 0 24 hm5C_associated_SNPs_59713 0 0 1 GRWD1 POSTAR2 ENCODE chr15:57836718-57836791
64251 chr9 131475465 131475465 1 + G T LUAD 131475462 + 131475442 131475482 41 AGGCCAAGCACCAGCGTGGCCGAGGCGAGCTTGCCAGTGAG AGGCCAAGCACCAGCGTGGCCGATGCGAGCTTGCCAGTGAG < 41bp 0.771011521528603 0.370632579227185 0.6589793 0.122146994 prediction 0.542023043057206 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131475462 chr9:131475465 nonsynonymous SNV 0.630 2 24 hm5C_associated_SNPs_59716 0 0 1 PRPF8 POSTAR2 ENCODE chr9:131475454-131475515
64251 chr8 145736245 145736245 1 + G T SARC 145736243 + 145736223 145736263 41 GGTCACCACAGTCACCTTCACTGGGATGATGCGCTGCAGCC GGTCACCACAGTCACCTTCACTTGGATGATGCGCTGCAGCC < 41bp 0.866056511686647 0.595056467577455 0.9205717 0.8487421 prediction 0.542000088218384 Functional Loss - MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736243 chr8:145736245 nonsynonymous SNV 0.742 1 23 hm5C_associated_SNPs_59720 0 0 2 PPIG POSTAR2 ENCODE chr8:145736225-145736286
64251 chr1 45806997 45806997 1 + G T PAAD 45806995 + 45806975 45807015 41 GAGCTGAGTGGGCTTGGGGACAGGAAGAGTTTGCTGAACCA GAGCTGAGTGGGCTTGGGGACATGAAGAGTTTGCTGAACCA < 41bp 0.867111446472715 0.596114482273749 0.35536236 0.26423585 prediction 0.541993928397932 Functional Loss - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45806995 chr1:45806997 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_59721 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585674 chr1:45806976-45806997
64251 chr3 10916719 10916719 1 + G T LUSC 10916717 + 10916697 10916737 41 ATACGAGGGGTCACGTTGCCCGGGGCCTCAGAGGGCATCAA ATACGAGGGGTCACGTTGCCCGTGGCCTCAGAGGGCATCAA < 41bp 0.87428585741912 0.603305134103864 0.88027126 0.14883304 prediction 0.541961446630512 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10916717 chr3:10916719 nonsynonymous SNV 0.559 5 23 hm5C_associated_SNPs_59725 0 0 1 RPS3 POSTAR2 ENCODE chr3:10916666-10916781
64251 chr22 50615649 50615649 1 + G C CESC 50615648 + 50615628 50615668 41 AACTGTTACCACCGGGCGGCCGAGGGCCGCGCGCCCAAGAT AACTGTTACCACCGGGCGGCCCAGGGCCGCGCGCCCAAGAT < 41bp 0.835928693661587 0.564953530892562 0.8942426 0.531886 prediction 0.54195032553805 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615648 chr22:50615649 nonsynonymous SNV 0.570 3 22 hm5C_associated_SNPs_59726 0 0 1 YBX3 POSTAR2 ENCODE chr22:50615607-50615662
64251 chr19 11352177 11352177 1 + G T THYM 11352175 + 11352155 11352195 41 CCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATGGTG CCCTCACAGGCCACGTGCAGCGTCAGAGGCGGGAGATGGTG < 41bp 0.869639839257468 0.598665474092789 0.77001476 0.37226662 prediction 0.541948730329358 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11352175 chr19:11352177 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_59727 0 0 4 LARP4 POSTAR2 ENCODE chr19:11352142-11352178
64251 chr11 119207121 119207121 1 + A C CESC 119207117 + 119207097 119207137 41 GCCGGGGCATCCTGCAGACCCTCAATGTCTACCTCTGAAGC GCCGGGGCATCCTGCAGACCCTCACTGTCTACCTCTGAAGC < 41bp 0.77096968651798 0.358887622174514 0.20525578 0.0041397214 prediction 0.541939373035959 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119207117 chr11:119207121 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_59728 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119207020-119207312
64251 chr16 68217182 68217182 1 + G T ESCA 68217180 + 68217160 68217200 41 AGTTCCTCCATATCATAACCCAGCAGTTACAGCTGCAGTGC AGTTCCTCCATATCATAACCCATCAGTTACAGCTGCAGTGC < 41bp 0.770968602257465 0.493979237428773 0.3608166 0.071671784 prediction 0.54193720451493 Functional Loss - NFATC3 ENSG00000072736 CDS Human protein_coding chr16:68217180 chr16:68217182 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_59729 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:68217161-68217182
64251 chrX 47101874 47101874 1 + G C BLCA 47101870 + 47101850 47101890 41 GTCCCCAAGAAAGGCAAGATCTCGGATCTATGTGTGGCTCT GTCCCCAAGAAAGGCAAGATCTCGCATCTATGTGTGGCTCT < 41bp 0.814659301011169 0.543702418826815 0.3333459 0.106250614 prediction 0.541913764368708 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101870 chrX:47101874 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_59735 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chrX:47101858-47101912
64251 chr3 33906912 33906912 1 + G T UCEC 33906910 + 33906890 33906930 41 ACCACCCTATCCCACCTATCCAGGATATCCTGGGTAAGGCT ACCACCCTATCCCACCTATCCATGATATCCTGGGTAAGGCT < 41bp 0.862258958385622 0.591307823645554 0.39649045 0.036379278 prediction 0.541902269480136 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906910 chr3:33906912 stopgain 1.000 1 23 hm5C_associated_SNPs_59738 0 0 2 BUD13 POSTAR2 ENCODE chr3:33906862-33906920
64251 chr1 16112887 16112887 1 + A C rs41268341 16112883 + 16112863 16112903 41 GAGCAGGGAGTCCCGAACTTCTGCATTCACAGACCACCTCC GAGCAGGGAGTCCCGAACTTCTGCCTTCACAGACCACCTCC < 41bp 0.863496072105996 0.592554070334565 0.90926266 0.3302405 prediction 0.541884003542862 Functional Loss - FBLIM1 ENSG00000162458 UTR3 Human protein_coding chr1:16112883 chr1:16112887 . . 0 25 hm5C_associated_SNPs_59740 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:16112861-16112890
64251 chr19 39116734 39116734 1 + G T LUSC 39116731 + 39116711 39116751 41 TGCTGGAGACCTGCCATTTCCAGGCCTTCTGGGTAACTTCC TGCTGGAGACCTGCCATTTCCAGTCCTTCTGGGTAACTTCC < 41bp 0.770929195923161 0.372980955281327 0.9105625 0.63079643 prediction 0.541858391846322 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39116731 chr19:39116734 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_59741 0 0 9 DDX24 POSTAR2 ENCODE chr19:39116695-39116784
64251 chr17 17991294 17991294 1 + G T rs142012845 17991292 + 17991272 17991312 41 CGCCGTCAGACCGGAATTGCCGGTGCCGCCGCCACCGCTGT CGCCGTCAGACCGGAATTGCCGTTGCCGCCGCCACCGCTGT < 41bp 0.770926188844295 0.471848942343004 0.88909525 0.3674183 prediction 0.54185237768859 Functional Loss - DRG2 ENSG00000108591 UTR5 Human protein_coding chr17:17991292 chr17:17991294 . . 0 23 hm5C_associated_SNPs_59742 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:17991278-17991323
64251 chr22 29885168 29885168 1 + G C BLCA 29885164 + 29885144 29885184 41 AGCAGAAGAGGCTGCATCCCCAGAGAAGGAAGCCAAGTCAC AGCAGAAGAGGCTGCATCCCCAGACAAGGAAGCCAAGTCAC < 41bp 0.770920020538655 0.48038514385196 0.89534974 0.81543183 prediction 0.54184004107731 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885164 chr22:29885168 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_59744 0 0 1 MBNL2 POSTAR2 GSE68890,GSM1685423 chr22:29885150-29885171
64251 chr22 46693310 46693310 1 + G C COAD 46693309 + 46693289 46693329 41 GCTCTCTCCATGGAAGGAGGCGGCGGCCGCGATGAGCCTTC GCTCTCTCCATGGAAGGAGGCCGCGGCCGCGATGAGCCTTC < 41bp 0.770903212843743 0.468630010564712 0.90074635 0.8311187 prediction 0.541806425687486 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46693309 chr22:46693310 nonsynonymous SNV 0.080 0 22 hm5C_associated_SNPs_59745 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:46693280-46693340
64251 chr8 144333108 144333108 1 + G T rs560297688 144333106 + 144333086 144333126 41 GCCCTCTGGGTCCCCGAGCTCTGCAGCGAGCCCTGGGACCA GCCCTCTGGGTCCCCGAGCTCTTCAGCGAGCCCTGGGACCA < 41bp 0.770900937045703 0.447325371603967 0.73121226 0.576817 prediction 0.541801874091406 Functional Loss - ZFP41 ENSG00000181638;ENSG00000264668 UTR3 Human other chr8:144333106 chr8:144333108 . . 0 23 hm5C_associated_SNPs_59746 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:144333074-144333108
64251 chr3 41274909 41274909 1 + A T LIHC 41274905 + 41274885 41274925 41 CAGAACTGTCTTTGGACTCTCAGGAATCTTTCAGATGCTGC CAGAACTGTCTTTGGACTCTCAGGTATCTTTCAGATGCTGC < 41bp 0.770889603137971 0.464791378257975 0.40641546 0.39763916 prediction 0.541779206275942 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41274905 chr3:41274909 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_59747 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41274835-41274926
64251 chr12 56362617 56362617 1 + T C STAD 56362616 + 56362596 56362636 41 TCTGCCATTCTCATCGGGTCCTCCACCGAGACCTTAAACCT TCTGCCATTCTCATCGGGTCCCCCACCGAGACCTTAAACCT < 41bp 0.77088770207528 0.497626048940173 0.76929367 0.016547292 prediction 0.541775404150559 Functional Loss - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56362616 chr12:56362617 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_59748 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:56362576-56362619
64251 chr19 41826288 41826288 1 + C T STAD 41826286 + 41826266 41826306 41 TCGGAGGCCTGGGTTCCCGACTCGGAGGAGAGGCTGATCCT TCGGAGGCCTGGGTTCCCGACTTGGAGGAGAGGCTGATCCT < 41bp 0.770865437911424 0.49656825724457 0.33837914 0.30583775 prediction 0.541730875822848 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41826286 chr19:41826288 nonsynonymous SNV 0.912 1 23 hm5C_associated_SNPs_59751 0 0 1 SRSF1 POSTAR2 ENCODE chr19:41826247-41826345
64251 chr16 68573295 68573295 1 + G C rs1170443 68573291 + 68573271 68573311 41 AGATCAGAATTGGAGATAACCGAGGCTTCGGCGGGGGCGGG AGATCAGAATTGGAGATAACCGAGCCTTCGGCGGGGGCGGG < 41bp 0.774178601925344 0.503320097550492 0.90054655 0.8794195 prediction 0.541717008749705 Functional Loss - ZFP90 ENSG00000184939 UTR5 Human protein_coding chr16:68573291 chr16:68573295 . . 0 25 hm5C_associated_SNPs_59753 0 0 4 NCBP2 POSTAR2 ENCODE chr16:68573201-68573304
64251 chr22 18210208 18210208 1 + G T BLCA 18210206 + 18210186 18210226 41 GATGAAGCCCATGCCGCTGTCTGAGGGCAAGTCTATACTGC GATGAAGCCCATGCCGCTGTCTTAGGGCAAGTCTATACTGC < 41bp 0.836598620792409 0.565745170599011 0.7268668 0.29918462 prediction 0.541706900386796 Functional Loss - BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18210206 chr22:18210208 stopgain 0.434 0 23 hm5C_associated_SNPs_59755 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:18210198-18210236
64251 chr2 86366867 86366867 1 + G T rs565794917 86366865 + 86366845 86366885 41 AGCCTGGGAAGCTGAGGCTGCAGTAGCCATGACTGCACCAC AGCCTGGGAAGCTGAGGCTGCATTAGCCATGACTGCACCAC < 41bp 0.838572332660849 0.567725741234963 0.70749164 0.33734456 prediction 0.541693182851772 Functional Loss - PTCD3 ENSG00000132300 UTR3 Human protein_coding chr2:86366865 chr2:86366867 . . 0 23 hm5C_associated_SNPs_59757 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:86366842-86366868
64251 chr20 30381768 30381768 1 + C T SKCM 30381766 + 30381746 30381786 41 ATGCCCTTTCTCGTTTGATTCTCGAGACAAAGAACGTCAGT ATGCCCTTTCTCGTTTGATTCTTGAGACAAAGAACGTCAGT < 41bp 0.809255310197079 0.538419859096367 0.63027656 0.17071185 prediction 0.541670902201425 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381766 chr20:30381768 stopgain 0.998 1 23 hm5C_associated_SNPs_59760 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr3 124449455 124449455 1 + G T LGG 124449452 + 124449432 124449472 41 CGATCTGCGGGGCATCGTGTCTCGACCGCGTCTTCTGAGTC CGATCTGCGGGGCATCGTGTCTCTACCGCGTCTTCTGAGTC < 41bp 0.770819555786165 0.39688238020448 0.37690824 0.9125051 prediction 0.54163911157233 Functional Loss - UMPS ENSG00000114491 CDS Human protein_coding chr3:124449452 chr3:124449455 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_59762 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:124449450-124449470
64251 chrX 149642015 149642015 1 + G T LUSC 149642012 + 149641992 149642032 41 CGGTGAAGCCCCAGCATCAACACGGGAACTCTTTCACTAGC CGGTGAAGCCCCAGCATCAACACTGGAACTCTTTCACTAGC < 41bp 0.770817466843865 0.373662712692274 0.7567868 0.10170889 prediction 0.541634933687731 Functional Loss - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149642012 chrX:149642015 nonsynonymous SNV 0.317 0 24 hm5C_associated_SNPs_59763 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:149642000-149642020
64251 chr10 31809176 31809176 1 + G T UCEC 31809174 + 31809154 31809194 41 TGTGAATGGGCGACCAAGAACAGGACTCAAGACATCTCAGT TGTGAATGGGCGACCAAGAACATGACTCAAGACATCTCAGT < 41bp 0.804088752034625 0.533271814728051 0.52650887 0.079354376 prediction 0.541633874613148 Functional Loss - ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31809174 chr10:31809176 stopgain 1.000 0 23 hm5C_associated_SNPs_59764 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:31809174-31809195
64251 chr10 79814760 79814760 1 + G T CHOL 79814757 + 79814737 79814777 41 CACCTTCCTGCCTCTCTGGTCTGGGCCACTAATGTCACTGC CACCTTCCTGCCTCTCTGGTCTGTGCCACTAATGTCACTGC < 41bp 0.770805495573021 0.379867212414808 0.06091118 0.033373922 prediction 0.541610991146041 Functional Loss - RPS24 ENSG00000138326 CDS Human protein_coding chr10:79814757 chr10:79814760 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_59765 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr10:79814755-79814781
64251 chr12 27841309 27841309 1 + G T UCEC 27841307 + 27841287 27841327 41 GCTGCGCTCCGTGGACTTGGCAGAATATGCGCCCAATCTCA GCTGCGCTCCGTGGACTTGGCATAATATGCGCCCAATCTCA < 41bp 0.770798063742213 0.43629725308694 0.3389326 0.08354059 prediction 0.541596127484425 Functional Loss - PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27841307 chr12:27841309 stopgain 0.996 0 23 hm5C_associated_SNPs_59767 0 0 2 FASTKD2 POSTAR2 ENCODE chr12:27841230-27841348
64251 chr9 132988695 132988695 1 + G T LUAD 132988692 + 132988672 132988712 41 CCGACGGGAAGCTGACCCTGCAGGAGTTCCAGGAGGGTTCC CCGACGGGAAGCTGACCCTGCAGTAGTTCCAGGAGGGTTCC < 41bp 0.907221449719853 0.636433059931741 0.8601017 0.40792817 prediction 0.541576779576225 Functional Loss - NCS1 ENSG00000107130 CDS Human protein_coding chr9:132988692 chr9:132988695 stopgain 1.000 1 24 hm5C_associated_SNPs_59769 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:132988674-132988716
64251 chr4 124639 124639 1 + G C HNSC 124635 + 124615 124655 41 ATGGCGGCGGTGGGAGGAGTCTGTGAATGGAGTTCCCGCTC ATGGCGGCGGTGGGAGGAGTCTGTCAATGGAGTTCCCGCTC < 41bp 0.806402434791919 0.535619920937833 0.3938478 0.43938717 prediction 0.541565027708171 Functional Loss - ZNF718 ENSG00000250312;ENSG00000256143 ncRNA_exonic Human other chr4:124635 chr4:124639 . . 0 25 hm5C_associated_SNPs_59770 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:124637-124672
64251 chr12 97301074 97301074 1 + G T rs531209713 97301072 + 97301052 97301092 41 GGCCCCCTGTTGTGTTGCTGCGGAGAGGTGAGGTTCCGGAG GGCCCCCTGTTGTGTTGCTGCGTAGAGGTGAGGTTCCGGAG < 41bp 0.848913954347289 0.578131693347059 0.7851049 0.37796524 prediction 0.54156452200046 Functional Loss - NEDD1 ENSG00000139350 UTR5 Human protein_coding chr12:97301072 chr12:97301074 . . 0 23 hm5C_associated_SNPs_59771 0 0 3 DDX3X POSTAR2 ENCODE chr12:97301049-97301079
64251 chr4 184606267 184606267 1 + G T LUAD 184606264 + 184606244 184606284 41 TCTGAAAGATGACCAGAAGTCTCGGATAGAAAAGAACCTCA TCTGAAAGATGACCAGAAGTCTCTGATAGAAAAGAACCTCA < 41bp 0.770781671601413 0.4103795891226 0.11440769 0.04993567 prediction 0.541563343202825 Functional Loss - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184606264 chr4:184606267 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_59773 0 0 2 ZNF622 POSTAR2 ENCODE chr4:184606234-184606277
64251 chr6 27861580 27861580 1 + G T STAD 27861578 + 27861558 27861598 41 GCTGGCCAAGCACGCCGTGTCCGAGGGCACAAAGGCCGTCA GCTGGCCAAGCACGCCGTGTCCTAGGGCACAAAGGCCGTCA < 41bp 0.852959930258008 0.582178659174343 0.8357401 0.3479008 prediction 0.54156254216733 Functional Loss - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861578 chr6:27861580 stopgain 0.996 0 23 hm5C_associated_SNPs_59774 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27861520-27861580
64251 chr12 48174054 48174054 1 + G T UCEC 48174052 + 48174032 48174072 41 TTTGCTGACATCAGCATCCTCAGCGATTTCTGACCCAGGGG TTTGCTGACATCAGCATCCTCATCGATTTCTGACCCAGGGG < 41bp 0.770776302367673 0.443065117390999 0.80548835 0.27079087 prediction 0.541552604735347 Functional Loss - SLC48A1 ENSG00000211584 CDS Human protein_coding chr12:48174052 chr12:48174054 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_59776 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:48174031-48174056
64251 chr3 111632438 111632438 1 + G T BRCA 111632435 + 111632415 111632455 41 AGTGCCAGCTTCTTTACCCCCAGGAGCACCAGGAATGATGA AGTGCCAGCTTCTTTACCCCCAGTAGCACCAGGAATGATGA < 41bp 0.770772015343116 0.402446204075151 0.8939297 0.20492369 prediction 0.541544030686233 Functional Loss - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111632435 chr3:111632438 nonsynonymous SNV 0.662 4 24 hm5C_associated_SNPs_59777 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:111632418-111632517
64251 chr1 110882449 110882449 1 + G T LUAD 110882446 + 110882426 110882466 41 TTCTTCGGGCGGGGGCGAATCGCGCAGCAGCTCCCGGGGTG TTCTTCGGGCGGGGGCGAATCGCTCAGCAGCTCCCGGGGTG < 41bp 0.896902487226845 0.626142170291485 0.6765337 0.14939687 prediction 0.541520633870721 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882446 chr1:110882449 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_59780 0 0 4 EIF3H POSTAR2 ENCODE chr1:110882421-110882477
64251 chr15 85188820 85188820 1 + G C SKCM 85188816 + 85188796 85188836 41 GCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAA GCTCACAGGATGGCAGAGATCCCGCGGGTCAAGAAGACAAA < 41bp 0.772374971653035 0.501616443322972 0.90360963 0.8029804 prediction 0.541517056660126 Functional Loss - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188816 chr15:85188820 synonymous SNV . 0 25 hm5C_associated_SNPs_59782 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:85188773-85188825
64251 chr17 28770866 28770866 1 + G T UCEC 28770864 + 28770844 28770884 41 GTTCTAGATGCCACAGATGGCAGGGGTATATTAAATGCCAC GTTCTAGATGCCACAGATGGCATGGGTATATTAAATGCCAC < 41bp 0.770757867396179 0.430135526088224 0.88319534 0.29986563 prediction 0.541515734792358 Functional Loss - CPD ENSG00000108582 CDS Human protein_coding chr17:28770864 chr17:28770866 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_59783 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:28770848-28770900
64251 chr21 37717283 37717283 1 + G T UCEC 37717281 + 37717261 37717301 41 TATGGGATAATGATGTATCACAGAAATAGACTCATCAAAGC TATGGGATAATGATGTATCACATAAATAGACTCATCAAAGC < 41bp 0.770724139773148 0.464844255475129 0.06699103 0.02214104 prediction 0.541448279546296 Functional Loss - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37717281 chr21:37717283 nonsynonymous SNV 0.975 2 23 hm5C_associated_SNPs_59786 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:37717275-37717294
64251 chr17 40931009 40931009 1 + G T SARC 40931007 + 40930987 40931027 41 TGGATGAAGCCACTCTACTGCGGGCTCTGCAGGCCCTACAG TGGATGAAGCCACTCTACTGCGTGCTCTGCAGGCCCTACAG < 41bp 0.857582159949207 0.586863852663509 0.9078282 0.35534573 prediction 0.541436614571396 Functional Loss - VPS25 ENSG00000131475 CDS Human protein_coding chr17:40931007 chr17:40931009 synonymous SNV . 0 23 hm5C_associated_SNPs_59787 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:40930976-40931028
64251 chr2 29160860 29160860 1 + G T LUSC 29160857 + 29160837 29160877 41 GTTCATGCATCATACCTGTCCACGGTGAGTCTTTTCAGCTT GTTCATGCATCATACCTGTCCACTGTGAGTCTTTTCAGCTT < 41bp 0.770708680043477 0.396855731566634 0.27522364 0.035226226 prediction 0.541417360086954 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29160857 chr2:29160860 synonymous SNV . 0 24 hm5C_associated_SNPs_59790 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:29160835-29160860
64251 chr1 92789825 92789825 1 + G C BLCA 92789824 + 92789804 92789844 41 ATTAAACCACTGCCAAGTTACGAGAATTTGAAAAAAGAAAC ATTAAACCACTGCCAAGTTACCAGAATTTGAAAAAAGAAAC < 41bp 0.770697664055447 0.48900868143047 0.4291121 0.30599797 prediction 0.541395328110894 Functional Loss - RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92789824 chr1:92789825 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_59791 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:92789796-92789825
64251 chr14 100996232 100996232 1 + G T KIRC 100996229 + 100996209 100996249 41 TGACGGGCAGCGCCGATGGCCGGGTCCTGATGTACAGCTTC TGACGGGCAGCGCCGATGGCCGGTTCCTGATGTACAGCTTC < 41bp 0.770687516473833 0.385972565868942 0.7550897 0.17516702 prediction 0.541375032947665 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996229 chr14:100996232 nonsynonymous SNV 0.952 1 24 hm5C_associated_SNPs_59794 0 0 1 PUM2 POSTAR2 ENCODE chr14:100996201-100996250
64251 chr14 100996231 100996231 1 + G T LUAD 100996229 + 100996209 100996249 41 TGACGGGCAGCGCCGATGGCCGGGTCCTGATGTACAGCTTC TGACGGGCAGCGCCGATGGCCGTGTCCTGATGTACAGCTTC < 41bp 0.770687516473833 0.440747459454262 0.7550897 0.24845383 prediction 0.541375032947665 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996229 chr14:100996231 synonymous SNV . 0 23 hm5C_associated_SNPs_59795 0 0 1 PUM2 POSTAR2 ENCODE chr14:100996201-100996250
64251 chr17 5993784 5993784 1 + C T LUSC 5993782 + 5993762 5993802 41 TGCGGGGCTGTGGACCGGCTCTCCGTGTACCGTGTGGACGA TGCGGGGCTGTGGACCGGCTCTTCGTGTACCGTGTGGACGA < 41bp 0.770685115578321 0.495250687043977 0.20502621 0.05255294 prediction 0.541370231156643 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:5993782 chr17:5993784 nonsynonymous SNV 0.762 3 23 hm5C_associated_SNPs_59796 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:5993771-5993795
64251 chr8 37613979 37613979 1 + G T rs79241962 37613977 + 37613957 37613997 41 TCTTAACTTGAGGGCCTCTCCGGTACTAACATCCTGCGATA TCTTAACTTGAGGGCCTCTCCGTTACTAACATCCTGCGATA < 41bp 0.770683606849529 0.482254540332844 0.6591873 0.1188896 prediction 0.541367213699058 Functional Loss - ERLIN2 ENSG00000147475 UTR3 Human protein_coding chr8:37613977 chr8:37613979 . . 0 23 hm5C_associated_SNPs_59797 0 0 2 YBX3 POSTAR2 ENCODE chr8:37613951-37614013
64251 chr16 14989410 14989410 1 + G T ESCA 14989407 + 14989387 14989427 41 TGCAGTTGACAAGCCGGCTACAGGGAGTCCGCGCGCTCGGC TGCAGTTGACAAGCCGGCTACAGTGAGTCCGCGCGCTCGGC < 41bp 0.770666873172554 0.379082997864224 0.90245605 0.4442859 prediction 0.541333746345109 Functional Loss - NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14989407 chr16:14989410 stopgain 0.433 1 24 hm5C_associated_SNPs_59799 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:14989409-14989443
64251 chr3 14172381 14172381 1 + C T rs34099410 14172379 + 14172359 14172399 41 GGCTCTCGCTTGTGGTGTCTCCCGACAGCATCCACAGTGTG GGCTCTCGCTTGTGGTGTCTCCTGACAGCATCCACAGTGTG < 41bp 0.773966222103046 0.503331252870221 0.15574938 0.16790521 prediction 0.54126993846565 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14172379 chr3:14172381 synonymous SNV . 0 23 hm5C_associated_SNPs_59804 4 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:14172333-14172382
64251 chr12 56112932 56112932 1 + G T STAD 56112930 + 56112910 56112950 41 ACCATGAGGTGAAGACCCTACAGGTCCAGGCTGCCCAATTT ACCATGAGGTGAAGACCCTACATGTCCAGGCTGCCCAATTT < 41bp 0.770628911508632 0.442914079643731 0.21446994 0.03622222 prediction 0.541257823017264 Functional Loss - BLOC1S1 ENSG00000135441;ENSG00000258311 CDS Human other chr12:56112930 chr12:56112932 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_59805 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:56112919-56112951
64251 chr16 3339481 3339481 1 + A T rs34852026 3339477 + 3339457 3339497 41 GGTGCTGCTTCCTGACCAGGCCCGAGGGGAGGTGCCCTGGA GGTGCTGCTTCCTGACCAGGCCCGTGGGGAGGTGCCCTGGA < 41bp 0.838750066175694 0.568121944091262 0.12830728 0.28609312 prediction 0.541256244168863 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339477 chr16:3339481 nonsynonymous SNV 0.790 0 25 hm5C_associated_SNPs_59807 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3339457-3339503
64251 chr20 30193254 30193254 1 + G T LUAD 30193252 + 30193232 30193272 41 CCCCAGCTGCGCGCTGAAGGCCGGCAAGACAGCGAGCGGTG CCCCAGCTGCGCGCTGAAGGCCTGCAAGACAGCGAGCGGTG < 41bp 0.864882857861682 0.594268938599687 0.4122728 0.2989567 prediction 0.541227838523991 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193252 chr20:30193254 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_59811 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:30193254-30193255
64251 chr7 12665407 12665407 1 + G T UCEC 12665404 + 12665384 12665424 41 TAGGTAAAGATGCTAATCCCCAAGAGAGGAAGGCTGCAATG TAGGTAAAGATGCTAATCCCCAATAGAGGAAGGCTGCAATG < 41bp 0.770583201559392 0.391280209664988 0.41118792 0.021646291 prediction 0.541166403118784 Functional Loss - SCIN ENSG00000006747 CDS Human protein_coding chr7:12665404 chr7:12665407 stopgain 1.000 1 24 hm5C_associated_SNPs_59815 0 0 1 UCHL5 POSTAR2 ENCODE chr7:12665386-12665443
64251 chrX 70517735 70517735 1 + G T UCEC 70517732 + 70517712 70517752 41 AAGAAGAGATGCGGCGGCAGCAAGAAGAAATGATGCGGCGA AAGAAGAGATGCGGCGGCAGCAATAAGAAATGATGCGGCGA < 41bp 0.903420734322903 0.632846144992872 0.8913538 0.69623965 prediction 0.541149178660061 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70517732 chrX:70517735 stopgain 0.952 1 24 hm5C_associated_SNPs_59816 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819214 chrX:70517700-70517740
64251 chr18 77808291 77808291 1 + A C rs536207955 77808287 + 77808267 77808307 41 TAAAGACAGAGTCTGCCATGCAGGAGTGCTTCGCAGGTCAG TAAAGACAGAGTCTGCCATGCAGGCGTGCTTCGCAGGTCAG < 41bp 0.770570194706535 0.436212852412463 0.8685471 0.7799374 prediction 0.541140389413069 Functional Loss - RBFA ENSG00000261126 ncRNA_intronic Human lincRNA chr18:77808287 chr18:77808291 . . 0 25 hm5C_associated_SNPs_59819 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr18:77808267-77808296
64251 chr1 25688137 25688137 1 + A C rs28667288 25688133 + 25688113 25688153 41 CCCCAGGCTCCCCACCTCTGCAAGATGGGATACACTCTTCA CCCCAGGCTCCCCACCTCTGCAAGCTGGGATACACTCTTCA < 41bp 0.885689181506378 0.61515375469453 0.38822526 0.32401592 prediction 0.541070853623698 Functional Loss - TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688133 chr1:25688137 . . 0 25 hm5C_associated_SNPs_59827 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:25688132-25688247
64251 chr1 171765635 171765635 1 + C T BRCA 171765633 + 171765613 171765653 41 ACCCTATAGGTGTTTTTATTCTCAACCTTGTGTGCCGAGAC ACCCTATAGGTGTTTTTATTCTTAACCTTGTGTGCCGAGAC < 41bp 0.77492776961027 0.504431116381056 0.2071228 0.24510401 prediction 0.540993306458429 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765633 chr1:171765635 synonymous SNV . 0 23 hm5C_associated_SNPs_59839 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171765633-171765661
64251 chr19 12924254 12924254 1 + G T HNSC 12924251 + 12924231 12924271 41 CCCACCGATATTTCCTGGAACGCGGCCTGGAGTCAGCAACC CCCACCGATATTTCCTGGAACGCTGCCTGGAGTCAGCAACC < 41bp 0.770492237434977 0.374506308054523 0.48978853 0.10155329 prediction 0.540984474869955 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924251 chr19:12924254 nonsynonymous SNV 0.509 1 24 hm5C_associated_SNPs_59841 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:12924230-12924311
64251 chr13 88329128 88329128 1 + G T UCEC 88329125 + 88329105 88329145 41 CTCCAGTACAATCTCATCCGCGAGATTCAGTCTGGAACTTT CTCCAGTACAATCTCATCCGCGATATTCAGTCTGGAACTTT < 41bp 0.770483546815177 0.378488980888934 0.8222388 0.334212 prediction 0.540967093630354 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329125 chr13:88329128 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_59843 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:88329122-88329157
64251 chr4 90034354 90034354 1 + G C BLCA 90034353 + 90034333 90034373 41 TCTATGAAGTCATCAACATACGAGGAGCTTGATAGAGTTAT TCTATGAAGTCATCAACATACCAGGAGCTTGATAGAGTTAT < 41bp 0.793986886058616 0.523512633325536 0.36180216 0.077831835 prediction 0.540948505466161 Functional Loss - TIGD2 ENSG00000180346 CDS Human protein_coding chr4:90034353 chr4:90034354 nonsynonymous SNV 0.869 3 22 hm5C_associated_SNPs_59846 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:90034349-90034378
64251 chr6 27101166 27101166 1 + G T LIHC 27101163 + 27101143 27101183 41 TGGGCAAAGTCACCATCGCACAGGGCGGTGTCCTGCCCAAC TGGGCAAAGTCACCATCGCACAGTGCGGTGTCCTGCCCAAC < 41bp 0.899506594669622 0.629034467764607 0.9167453 0.70424753 prediction 0.540944253810029 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101163 chr6:27101166 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_59849 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27101120-27101200
64251 chr3 179103475 179103475 1 + G T UCEC 179103472 + 179103452 179103492 41 AGGATTGGCGTCCGTTACATCTAGAACTTCTATGGGCATCA AGGATTGGCGTCCGTTACATCTATAACTTCTATGGGCATCA < 41bp 0.770464687107904 0.403838033764608 0.21013436 0.11940846 prediction 0.540929374215807 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179103472 chr3:179103475 nonsynonymous SNV 0.739 5 24 hm5C_associated_SNPs_59851 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:179103475-179103498
64251 chr16 83932989 83932989 1 + G C LUSC 83932985 + 83932965 83933005 41 GAGCTTCTACGGTGGGCTGGCCGAGACGGCCCAGCGGGCCG GAGCTTCTACGGTGGGCTGGCCGACACGGCCCAGCGGGCCG < 41bp 0.770439568437132 0.490112614828857 0.70809 0.22440276 prediction 0.540879136874264 Functional Loss - MLYCD ENSG00000103150 CDS Human protein_coding chr16:83932985 chr16:83932989 nonsynonymous SNV 0.970 1 25 hm5C_associated_SNPs_59854 0 0 2 FASTKD2 POSTAR2 ENCODE chr16:83932959-83933061
64251 chr1 181018381 181018381 1 + G T LUSC 181018379 + 181018359 181018399 41 ACTGGGAGAGGTACACTCAGCTGCTGAGGGGCTGGCAGCAG ACTGGGAGAGGTACACTCAGCTTCTGAGGGGCTGGCAGCAG < 41bp 0.770435501100563 0.433623663932102 0.5349847 0.3761626 prediction 0.540871002201126 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018379 chr1:181018381 synonymous SNV . 0 23 hm5C_associated_SNPs_59856 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chrX 136651151 136651151 1 + C T COAD 136651149 + 136651129 136651169 41 AAGCACATGCATGTGCATACCTCGGACAAGCCCTATATCTG AAGCACATGCATGTGCATACCTTGGACAAGCCCTATATCTG < 41bp 0.770396352446335 0.49340125002384 0.07966381 0.08928493 prediction 0.540792704892669 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136651149 chrX:136651151 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_59860 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:136651138-136651170
64251 chr10 22605389 22605389 1 + G T SARC 22605386 + 22605366 22605406 41 TGCAGAAAGGCTTCCAGATGCTGGCGGATCCCCGCTCCTTC TGCAGAAAGGCTTCCAGATGCTGTCGGATCCCCGCTCCTTC < 41bp 0.893540731877993 0.623149846608617 0.72779924 0.14474773 prediction 0.540781770538752 Functional Loss - COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22605386 chr10:22605389 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_59864 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:22605380-22605400
64251 chr5 35876471 35876471 1 + C T SKCM 35876469 + 35876449 35876489 41 CGCTGCCCCCTCCATTTTCTCTCCAATCTGGAATCCTGACA CGCTGCCCCCTCCATTTTCTCTTCAATCTGGAATCCTGACA < 41bp 0.77226180309213 0.501872773109864 0.96144855 0.16834965 prediction 0.540778059964533 Functional Loss - IL7R ENSG00000168685 CDS Human protein_coding chr5:35876469 chr5:35876471 synonymous SNV . 0 23 hm5C_associated_SNPs_59865 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:35876453-35876477
64251 chr6 126278260 126278260 1 + G T COAD 126278258 + 126278238 126278278 41 CCAGAGCCCAAGGACTACGACAGCACCTGCGTGTTCTGCCG CCAGAGCCCAAGGACTACGACATCACCTGCGTGTTCTGCCG < 41bp 0.865021001860866 0.594636597917291 0.23745024 0.106484145 prediction 0.540768807887151 Functional Loss - HINT3 ENSG00000111911 CDS Human protein_coding chr6:126278258 chr6:126278260 nonsynonymous SNV 0.802 1 23 hm5C_associated_SNPs_59866 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr6:126278256-126278279
64251 chr17 27186093 27186093 1 + G T UCEC 27186090 + 27186070 27186110 41 ACATTATCCGAGAGAAGCTCCTAGAACACCTGCCCCAGGAG ACATTATCCGAGAGAAGCTCCTATAACACCTGCCCCAGGAG < 41bp 0.770367586209765 0.38110755775687 0.28908074 0.69807535 prediction 0.54073517241953 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27186090 chr17:27186093 stopgain 0.951 1 24 hm5C_associated_SNPs_59870 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:27186068-27186120
64251 chr17 73689542 73689542 1 + G C LUAD 73689541 + 73689521 73689561 41 ATAATACAGAAGCAGAAAAGCGAGACCCCCAGGAACTCGTG ATAATACAGAAGCAGAAAAGCCAGACCCCCAGGAACTCGTG < 41bp 0.840915720258806 0.570550952236368 0.4086811 0.28025395 prediction 0.540729536044877 Functional Loss - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73689541 chr17:73689542 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_59872 0 0 10 DDX24 POSTAR2 ENCODE chr17:73689519-73689563
64251 chr7 74004202 74004202 1 + C T READ 74004200 + 74004180 74004220 41 ATGAAGATGACGCCAACAGACTCGGGGAGAAGGTGATCCTG ATGAAGATGACGCCAACAGACTTGGGGAGAAGGTGATCCTG < 41bp 0.780371715566334 0.510008677643541 0.24482393 0.4575354 prediction 0.540726075845585 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:74004200 chr7:74004202 synonymous SNV . 0 23 hm5C_associated_SNPs_59873 0 0 6 DDX24 POSTAR2 ENCODE chr7:74004182-74004252
64251 chr1 36506015 36506015 1 + A C CHOL 36506011 + 36505991 36506031 41 AGTTCAGAAGAGACATCACACTCGATTATTTTGTGCTGATA AGTTCAGAAGAGACATCACACTCGCTTATTTTGTGCTGATA < 41bp 0.770358253413108 0.351069033732954 0.3151952 0.21977064 prediction 0.540716506826216 Functional Loss - AGO3 ENSG00000126070 CDS Human protein_coding chr1:36506011 chr1:36506015 synonymous SNV . 0 25 hm5C_associated_SNPs_59874 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:36506007-36506038
64251 chr1 36506013 36506013 1 + C T UCEC 36506011 + 36505991 36506031 41 AGTTCAGAAGAGACATCACACTCGATTATTTTGTGCTGATA AGTTCAGAAGAGACATCACACTTGATTATTTTGTGCTGATA < 41bp 0.770358253413108 0.487123330183312 0.3151952 0.11060509 prediction 0.540716506826216 Functional Loss - AGO3 ENSG00000126070 CDS Human protein_coding chr1:36506011 chr1:36506013 stopgain 0.997 1 23 hm5C_associated_SNPs_59875 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:36506007-36506038
64251 chr3 158362393 158362393 1 + A C rs28372853 158362389 + 158362369 158362409 41 CGGCAGCTGAACCCACCCGGCGCCACGGGACTTTGACGCGT CGGCAGCTGAACCCACCCGGCGCCCCGGGACTTTGACGCGT < 41bp 0.770357335645259 0.478299725582039 0.24145558 0.22327876 prediction 0.540714671290518 Functional Loss - GFM1 ENSG00000168827 UTR5 Human protein_coding chr3:158362389 chr3:158362393 . . 0 25 hm5C_associated_SNPs_59876 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr3:158362392-158362393
64251 chr15 73076017 73076017 1 - C A MESO 73076020 - 73076000 73076040 41 GGGTCCCCATGGCGCTGTGGCGCGGCTCCGCGTACGCGGGC GGGTCCCCATGGCGCTGTGGCGCTGCTCCGCGTACGCGGGC < 41bp 0.896409194936225 0.626083190028383 0.48279485 0.24952927 prediction 0.540652009815684 Functional Loss - ADPGK ENSG00000159322 CDS Human protein_coding chr15:73076020 chr15:73076017 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_59881 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:73076000-73076020
64251 chr2 63175858 63175858 1 + G T HNSC 63175855 + 63175835 63175875 41 CCAGAAGTCTCAGCAGAGCTCTGGAAGGACTTCAGGATCTG CCAGAAGTCTCAGCAGAGCTCTGTAAGGACTTCAGGATCTG < 41bp 0.770300115398891 0.419391150275577 0.4129018 0.18384999 prediction 0.540600230797782 Functional Loss - EHBP1 ENSG00000115504 CDS Human protein_coding chr2:63175855 chr2:63175858 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_59883 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:63175822-63175886
64251 chr2 203560705 203560705 1 + C T STAD 203560703 + 203560683 203560723 41 GTATCTTGCTGGACACTGGCCTCGGGATAGCCATGGGCAAG GTATCTTGCTGGACACTGGCCTTGGGATAGCCATGGGCAAG < 41bp 0.770298935442545 0.493223952017398 0.046455204 0.08134207 prediction 0.540597870885091 Functional Loss - FAM117B ENSG00000138439 CDS Human protein_coding chr2:203560703 chr2:203560705 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_59884 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:203560685-203560706
64251 chr19 38689097 38689097 1 + G T CHOL 38689095 + 38689075 38689115 41 CCCCCTGCGGCGCCTGGACCCTGGGCTGATGCCCCTGCCTG CCCCCTGCGGCGCCTGGACCCTTGGCTGATGCCCCTGCCTG < 41bp 0.869054691051591 0.598756931223523 0.9010874 0.23740491 prediction 0.540595519656137 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38689095 chr19:38689097 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_59885 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:38689086-38689100
64251 chr8 43046701 43046701 1 + G T ESCA 43046698 + 43046678 43046718 41 TGGTGCTGGAAGGCCTGTGGCTGGGCTTGACATTCCTCCTG TGGTGCTGGAAGGCCTGTGGCTGTGCTTGACATTCCTCCTG < 41bp 0.911590835110807 0.64139009484213 0.9013792 0.37728977 prediction 0.540401480537355 Functional Loss - HGSNAT ENSG00000165102 CDS Human protein_coding chr8:43046698 chr8:43046701 nonsynonymous SNV 0.694 0 24 hm5C_associated_SNPs_59897 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:43046696-43046709
64251 chr1 52747475 52747475 1 + G T LUSC 52747473 + 52747453 52747493 41 ATCACTTTGTGCAGCTTTATCGGGATGCTCTGGCAGGTAGG ATCACTTTGTGCAGCTTTATCGTGATGCTCTGGCAGGTAGG < 41bp 0.857880698728339 0.587718983645174 0.940065 0.73966885 prediction 0.540323430166331 Functional Loss - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52747473 chr1:52747475 synonymous SNV . 0 23 hm5C_associated_SNPs_59906 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:52747458-52747488
64251 chr3 153958329 153958329 1 + C T UCEC 153958327 + 153958307 153958347 41 CTGACAGTCCTTAGTAACCACGCGAATGAGAAAGTGGAGAT CTGACAGTCCTTAGTAACCACGTGAATGAGAAAGTGGAGAT < 41bp 0.796507227143704 0.526353479301882 0.4858367 0.401478 prediction 0.540307495683643 Functional Loss - ARHGEF26 ENSG00000114790 CDS Human protein_coding chr3:153958327 chr3:153958329 nonsynonymous SNV 0.819 1 23 hm5C_associated_SNPs_59908 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:153958326-153958363
64251 chr18 2610781 2610781 1 + C T KICH 2610779 + 2610759 2610799 41 TACCAACTAGTTGTGCAAACCACGACTGAAGAAAGACGAAA TACCAACTAGTTGTGCAAACCATGACTGAAGAAAGACGAAA < 41bp 0.784514125497845 0.514404627117467 0.06983009 0.085433155 prediction 0.540218996760755 Functional Loss - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2610779 chr18:2610781 nonsynonymous SNV 0.700 3 23 hm5C_associated_SNPs_59912 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:2610763-2610793
64251 chr8 30032666 30032666 1 + G C LUAD 30032665 + 30032645 30032685 41 GCCGGGCCAATAGTGATTGGCGAAGGGAACCTAATAGAAGA GCCGGGCCAATAGTGATTGGCCAAGGGAACCTAATAGAAGA < 41bp 0.770107265689185 0.481880434208171 0.61008185 0.31476977 prediction 0.540214531378371 Functional Loss - DCTN6 ENSG00000104671 CDS Human protein_coding chr8:30032665 chr8:30032666 nonsynonymous SNV 0.990 2 22 hm5C_associated_SNPs_59914 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:30032657-30032681
64251 chr8 96044275 96044275 1 + C T STAD 96044273 + 96044253 96044293 41 CCTGCTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCAC CCTGCTGCTCCCTGCAGAATCCTGAAGCTCTGTTTTTGCAC < 41bp 0.773224144333249 0.503140793984422 0.3201416 0.25765988 prediction 0.540166700697656 Functional Loss - NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96044273 chr8:96044275 stopgain 0.994 0 23 hm5C_associated_SNPs_59916 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:96044246-96044284
64251 chr17 30615968 30615968 1 + A C COAD 30615964 + 30615944 30615984 41 CCCTGCCCCGGGAAATTGACCGCAAGTGGTACTATGACAGC CCCTGCCCCGGGAAATTGACCGCACGTGGTACTATGACAGC < 41bp 0.770082822764951 0.348093331224088 0.16191617 0.05664292 prediction 0.540165645529901 Functional Loss - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30615964 chr17:30615968 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_59917 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:30615942-30615976
64251 chr1 27320730 27320730 1 + G T rs146158445 27320728 + 27320708 27320748 41 GCGCGGAGAGCCTGAGCCGCCTGAGCGGCGGCGTGGCGCAG GCGCGGAGAGCCTGAGCCGCCTTAGCGGCGGCGTGGCGCAG < 41bp 0.859624677127528 0.58957991182979 0.36938146 0.20248169 prediction 0.540089530595475 Functional Loss - TRNP1 ENSG00000253368 CDS Human protein_coding chr1:27320728 chr1:27320730 synonymous SNV . 0 23 hm5C_associated_SNPs_59928 0 0 5 CSTF2T POSTAR2 ENCODE chr1:27320683-27320731
64251 chr22 40746003 40746003 1 + C T SKCM 40746001 + 40745981 40746021 41 CAAAAGCTGCAGGCATTATTCACCTTGGTGCTACTTCTTGC CAAAAGCTGCAGGCATTATTCATCTTGGTGCTACTTCTTGC < 41bp 0.770042177140544 0.498262888250225 0.06276795 0.059859008 prediction 0.540084354281088 Functional Loss - ADSL ENSG00000239900 CDS Human protein_coding chr22:40746001 chr22:40746003 synonymous SNV . 0 23 hm5C_associated_SNPs_59930 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40745958-40746007
64251 chr7 98935878 98935878 1 + G T READ 98935875 + 98935855 98935895 41 GGAGCCAGTGGGTGAAAGCTCATGAACTCAAGGAGCACAAC GGAGCCAGTGGGTGAAAGCTCATTAACTCAAGGAGCACAAC < 41bp 0.77004162272207 0.379948231310643 0.08677682 0.08296463 prediction 0.54008324544414 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98935875 chr7:98935878 stopgain 0.998 1 24 hm5C_associated_SNPs_59931 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:98935823-98935887
64251 chr12 111885521 111885521 1 + C T BLCA 111885519 + 111885499 111885539 41 GTGCAGCACCTCCACTTTCCCTCGGTCGTGGACATGCTCCA GTGCAGCACCTCCACTTTCCCTTGGTCGTGGACATGCTCCA < 41bp 0.787725003453039 0.517703368404474 0.08194935 0.08657092 prediction 0.54004327009713 Functional Loss - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111885519 chr12:111885521 nonsynonymous SNV 0.718 4 23 hm5C_associated_SNPs_59933 0 0 1 TROVE2 POSTAR2 ENCODE chr12:111885457-111885547
64251 chr22 24034555 24034555 1 - C G rs569466824 24034556 - 24034536 24034576 41 ATAGTAAACTGAAGTGTTTTCGGGGGGCCAGTTGAACAAAA ATAGTAAACTGAAGTGTTTTCCGGGGGCCAGTTGAACAAAA < 41bp 0.824857182355268 0.554848413675188 0.9270656 0.9192368 prediction 0.54001753736016 Functional Loss - RGL4 ENSG00000159496 CDS Human protein_coding chr22:24034556 chr22:24034555 synonymous SNV . 0 22 hm5C_associated_SNPs_59935 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:24034482-24034605
64251 chr1 33560248 33560248 1 + G T UCEC 33560245 + 33560225 33560265 41 ATGGGCACCGAGCTGGGTCACAAGATGCACGTTCTGGACCT ATGGGCACCGAGCTGGGTCACAATATGCACGTTCTGGACCT < 41bp 0.896879497149993 0.626871144128993 0.87187994 0.36153528 prediction 0.540016706041999 Functional Loss - AZIN2 ENSG00000142920 CDS Human protein_coding chr1:33560245 chr1:33560248 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_59936 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:33560246-33560283
64251 chr20 34526674 34526674 1 + G T LUAD 34526672 + 34526652 34526692 41 CCAGCCTTGGAAACAGCACTCAGGGGAGGGGAGATCTCATT CCAGCCTTGGAAACAGCACTCATGGGAGGGGAGATCTCATT < 41bp 0.769992250045397 0.423152182317528 0.9264718 0.7036177 prediction 0.539984500090794 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526672 chr20:34526674 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_59937 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:34526668-34526696
64251 chr1 161132177 161132177 1 + G T CESC 161132175 + 161132155 161132195 41 AGGCCGAGCCCAAGAGCTCACTGAAGGTGGGGCAACAACTC AGGCCGAGCCCAAGAGCTCACTTAAGGTGGGGCAACAACTC < 41bp 0.870147831322897 0.60016915948558 0.33461905 0.56390977 prediction 0.539957343674634 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132175 chr1:161132177 stopgain 0.987 0 23 hm5C_associated_SNPs_59939 0 0 5 DDX24 POSTAR2 ENCODE chr1:161132163-161132179
64251 chr8 25337499 25337499 1 + A C LUAD 25337495 + 25337475 25337515 41 CGTTTCGCCTGACACGTTCACAGCAGAAGTGAGCTCAGACG CGTTTCGCCTGACACGTTCACAGCCGAAGTGAGCTCAGACG < 41bp 0.769965922399345 0.382445782739405 0.76768553 0.69051397 prediction 0.53993184479869 Functional Loss - CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25337495 chr8:25337499 synonymous SNV . 0 25 hm5C_associated_SNPs_59943 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:25337450-25337501
64251 chr17 4846555 4846555 1 + G T STAD 4846553 + 4846533 4846573 41 TCACAGGGATTGTGGGACTGCTGGTTTTGGCCATGGGAGCA TCACAGGGATTGTGGGACTGCTTGTTTTGGCCATGGGAGCA < 41bp 0.769963760791068 0.43627204662751 0.3546201 0.17443314 prediction 0.539927521582136 Functional Loss - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846553 chr17:4846555 synonymous SNV . 0 23 hm5C_associated_SNPs_59945 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4846500-4846571
64251 chrX 23685870 23685870 1 + G T LUSC 23685867 + 23685847 23685887 41 TACGCGGGTGGACAAGTGTACCCGGGAGAGGCATCCCGGGT TACGCGGGTGGACAAGTGTACCCTGGAGAGGCATCCCGGGT < 41bp 0.769952253869354 0.389101042514409 0.7036238 0.41926205 prediction 0.539904507738707 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685867 chrX:23685870 synonymous SNV . 0 24 hm5C_associated_SNPs_59946 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:23685858-23685896
64251 chr12 1863544 1863544 1 + G T UCEC 1863542 + 1863522 1863562 41 ACAGAAAACCGATTGGGGTGCAGCAGGACTCCAGAGCCAGA ACAGAAAACCGATTGGGGTGCATCAGGACTCCAGAGCCAGA < 41bp 0.769938371209104 0.431101913130836 0.8896847 0.41129696 prediction 0.539876742418208 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1863542 chr12:1863544 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_59947 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:1863442-1863550
64251 chr5 134223831 134223831 1 + G T PRAD 134223829 + 134223809 134223849 41 CTGTGAGGAGAGAAACATTACAGGATTAGAAAATTTCACTC CTGTGAGGAGAGAAACATTACATGATTAGAAAATTTCACTC < 41bp 0.799596359769157 0.52965824021236 0.6681686 0.09581414 prediction 0.539876239113595 Functional Loss - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134223829 chr5:134223831 stopgain 0.012 1 23 hm5C_associated_SNPs_59948 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:134223823-134223835
64251 chr12 132426135 132426135 1 + G C BLCA 132426131 + 132426111 132426151 41 GCGGGAGGGCCTGGAGTTTGCGGTGATCAGGGTGAAGGGCC GCGGGAGGGCCTGGAGTTTGCGGTCATCAGGGTGAAGGGCC < 41bp 0.769935719104458 0.492320394936374 0.8932648 0.5347629 prediction 0.539871438208916 Functional Loss - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132426131 chr12:132426135 synonymous SNV . 0 25 hm5C_associated_SNPs_59949 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:132426097-132426142
64251 chr19 14041304 14041304 1 + G T rs140566596 14041302 + 14041282 14041322 41 GAACCAGACAAGCAGACAATCAGCGGACAATCGGTTCTGGA GAACCAGACAAGCAGACAATCATCGGACAATCGGTTCTGGA < 41bp 0.848787161978292 0.578853779510108 0.9172479 0.4187678 prediction 0.539866764936369 Functional Loss - CC2D1A ENSG00000132024 UTR3 Human protein_coding chr19:14041302 chr19:14041304 . . 0 23 hm5C_associated_SNPs_59951 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:14041288-14041336
64251 chr1 45232525 45232525 1 + G T LUAD 45232523 + 45232503 45232543 41 ACCAGACTGGCTTGAGCTCTCTGAGATGACCGAGCAGCCAG ACCAGACTGGCTTGAGCTCTCTTAGATGACCGAGCAGCCAG < 41bp 0.838555349960194 0.568643403112177 0.10916087 0.063427866 prediction 0.539823893696035 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45232523 chr1:45232525 stopgain 0.996 0 23 hm5C_associated_SNPs_59953 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:45232523-45232544
64251 chr17 72443058 72443058 1 + C T SKCM 72443056 + 72443036 72443076 41 CAGGTGATGGGCAGTGCCAACTCGACCCTGCGGGCTGAAGA CAGGTGATGGGCAGTGCCAACTTGACCCTGCGGGCTGAAGA < 41bp 0.791687866637959 0.5217825037813 0.19449377 0.07093176 prediction 0.539810725713318 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72443056 chr17:72443058 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_59956 0 0 1 SND1 POSTAR2 ENCODE chr17:72442996-72443067
64251 chr6 43415131 43415131 1 + G T THYM 43415129 + 43415109 43415149 41 GTGACCTGCCCCAGGAACCCCAGGGCCAGCCACTGCAGGTG GTGACCTGCCCCAGGAACCCCATGGCCAGCCACTGCAGGTG < 41bp 0.769889016852457 0.413791643128483 0.90964454 0.17719191 prediction 0.539778033704914 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43415129 chr6:43415131 nonsynonymous SNV 0.744 1 23 hm5C_associated_SNPs_59959 0 0 1 PPIG POSTAR2 ENCODE chr6:43415085-43415146
64251 chr7 99956677 99956677 1 + G T LUAD 99956674 + 99956654 99956694 41 AGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCAT AGGCAGCAGTTGCAGTCCATCAATGGGACCAAACTCACCAT < 41bp 0.90663829797207 0.636762939682143 0.9373878 0.66351616 prediction 0.539750716579854 Functional Loss - PILRB ENSG00000121716 CDS Human protein_coding chr7:99956674 chr7:99956677 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_59961 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:99956660-99956680
64251 chr8 17137583 17137583 1 + G T BRCA 17137580 + 17137560 17137600 41 ATGAACAAGAGGAGGTATTACTAGAACAGTTTCTGACTTTG ATGAACAAGAGGAGGTATTACTATAACAGTTTCTGACTTTG < 41bp 0.769874807074156 0.429101746177116 0.88003194 0.91523427 prediction 0.539749614148313 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17137580 chr8:17137583 stopgain 1.000 1 24 hm5C_associated_SNPs_59962 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr8:17137566-17137603
64251 chr15 40498573 40498573 1 + A C STAD 40498569 + 40498549 40498589 41 TGATCCTGAGAGACTGTTACCGGAAGAAGATCTAGATGTAA TGATCCTGAGAGACTGTTACCGGACGAAGATCTAGATGTAA < 41bp 0.769858190290475 0.36740800447014 0.9030982 0.90232074 prediction 0.539716380580951 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40498569 chr15:40498573 nonsynonymous SNV 0.769 3 25 hm5C_associated_SNPs_59965 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:40498545-40498643
64251 chr13 115089779 115089779 1 + G T SKCM 115089777 + 115089757 115089797 41 AACCTACTCCTCTTACTCCCCTGGAGCCTCAGAAACCTGGC AACCTACTCCTCTTACTCCCCTTGAGCCTCAGAAACCTGGC < 41bp 0.843882274883123 0.574028129295984 0.2481589 0.019728303 prediction 0.539708291174277 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115089777 chr13:115089779 synonymous SNV . 0 23 hm5C_associated_SNPs_59966 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr13:115089741-115089779
64251 chr3 183975374 183975374 1 + G T LUAD 183975371 + 183975351 183975391 41 CCATGCAGGCTCGCCATGCCCATGTGCCGCAGCTGCGCTGG CCATGCAGGCTCGCCATGCCCATTTGCCGCAGCTGCGCTGG < 41bp 0.769851013240332 0.368591752229775 0.113749325 0.02522394 prediction 0.539702026480664 Functional Loss - ECE2 ENSG00000145194 CDS Human protein_coding chr3:183975371 chr3:183975374 nonsynonymous SNV 0.754 0 24 hm5C_associated_SNPs_59968 0 0 2 DDX3X POSTAR2 ENCODE chr3:183975358-183975497
64251 chr15 90744608 90744608 1 + G C rs528107056 90744607 + 90744587 90744627 41 CGAGGCTGCGGGGCCGGCGCCGGCGGGAGGACTGCGGTGCC CGAGGCTGCGGGGCCGGCGCCCGCGGGAGGACTGCGGTGCC < 41bp 0.802850317349439 0.533001264407775 0.92224395 0.80455005 prediction 0.539698105883329 Functional Loss - SEMA4B ENSG00000185033 UTR5 Human protein_coding chr15:90744607 chr15:90744608 . . 0 22 hm5C_associated_SNPs_59969 0 0 2 DDX3X POSTAR2 ENCODE chr15:90744583-90744642
64251 chr12 57969018 57969018 1 + G T LUAD 57969016 + 57968996 57969036 41 CACCGCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTG CACCGCAAGATGGAAGTGACCGTGCGGGAGCTCTCATCCTG < 41bp 0.882364040358265 0.612535003118668 0.92978007 0.49938354 prediction 0.539658074479194 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57969016 chr12:57969018 nonsynonymous SNV 0.928 2 23 hm5C_associated_SNPs_59972 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:57969011-57969049
64251 chr11 8119342 8119342 1 + C T UCEC 8119340 + 8119320 8119360 41 TGTGGACCCAACAGACTTGTCTCGAGGAGGGGACAGCTATA TGTGGACCCAACAGACTTGTCTTGAGGAGGGGACAGCTATA < 41bp 0.819483563957751 0.549672135088892 0.8422056 0.21086949 prediction 0.539622857737717 Functional Loss - TUB ENSG00000166402 CDS Human protein_coding chr11:8119340 chr11:8119342 stopgain 1.000 1 23 hm5C_associated_SNPs_59977 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:8119331-8119363
64251 chr8 146278172 146278172 1 + A T UCEC 146278168 + 146278148 146278188 41 CGATGAAGGCGGCACAGCGTCGAAAAAACAAAAGAATAAGA CGATGAAGGCGGCACAGCGTCGAATAAACAAAAGAATAAGA < 41bp 0.769800477605953 0.455007717569892 0.122170866 0.102903426 prediction 0.539600955211906 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278168 chr8:146278172 nonsynonymous SNV 0.008 0 25 hm5C_associated_SNPs_59980 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chr8:146278160-146278180
64251 chr3 71804019 71804019 1 + G T KIRC 71804017 + 71803997 71804037 41 GCGCGCGCCGCCTCCTCGTGCTGGAAGAATTCAAGACGGAG GCGCGCGCCGCCTCCTCGTGCTTGAAGAATTCAAGACGGAG < 41bp 0.830590643631405 0.560805544996641 0.22755995 0.06727779 prediction 0.539570197269527 Functional Loss - GPR27 ENSG00000170837 CDS Human protein_coding chr3:71804017 chr3:71804019 synonymous SNV . 0 23 hm5C_associated_SNPs_59982 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:71804012-71804030
64251 chr9 133327632 133327632 1 + C T BLCA 133327630 + 133327610 133327650 41 GACGCTATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAG GACGCTATGTCCAGCAAAGGCTTCGTGGTTCTGGCCTACAG < 41bp 0.7697711932547 0.497968778941955 0.16270334 0.04971713 prediction 0.5395423865094 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133327630 chr9:133327632 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_59986 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:133327613-133327648
64251 chr15 44120487 44120487 1 + G T STAD 44120485 + 44120465 44120505 41 CAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCA CAAGCTACAACCCAAGAGAACGTCAGATGCGATGAATCTCA < 41bp 0.769758682973512 0.434520856565368 0.40006146 0.3861687 prediction 0.539517365947024 Functional Loss - WDR76 ENSG00000092470 CDS Human protein_coding chr15:44120485 chr15:44120487 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_59990 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:44120477-44120503
64251 chr1 150117140 150117140 1 + G C rs151124746 150117136 + 150117116 150117156 41 TGGCACAGACACAAGACTCCCAGAGTTGTCCTAACAATAAG TGGCACAGACACAAGACTCCCAGACTTGTCCTAACAATAAG < 41bp 0.801208957525475 0.531463333514988 0.830629 0.3569759 prediction 0.539491248020974 Functional Loss - VPS45 ENSG00000136631 UTR3 Human protein_coding chr1:150117136 chr1:150117140 . . 0 25 hm5C_associated_SNPs_59992 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150117138-150117160
64251 chr5 140038573 140038573 1 + C T BLCA 140038571 + 140038551 140038591 41 ACCCTCCACAACCAAGACACCTCGGGACAAGGAGCGGGAGA ACCCTCCACAACCAAGACACCTTGGGACAAGGAGCGGGAGA < 41bp 0.786018322129937 0.516278956533433 0.035303414 0.044947833 prediction 0.539478731193008 Functional Loss - IK ENSG00000113141 CDS Human protein_coding chr5:140038571 chr5:140038573 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_59993 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:140038543-140038574
64251 chr1 230338943 230338943 1 + C T SKCM 230338941 + 230338921 230338961 41 GTTGGAGGGACGATGGTCCGCTCCGGGCAGGACCCTTACGC GTTGGAGGGACGATGGTCCGCTTCGGGCAGGACCCTTACGC < 41bp 0.769738473300395 0.490879492411032 0.24645448 0.18108666 prediction 0.53947694660079 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230338941 chr1:230338943 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_59994 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:230338919-230338945
64251 chr1 184023900 184023900 1 + G T READ 184023897 + 184023877 184023917 41 AAGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGC AAGTAAACTGTGTAGGATTACCATAACTCCAGCTCATCTGC < 41bp 0.769731325563105 0.397119856207165 0.113768876 0.04597357 prediction 0.539462651126211 Functional Loss - TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184023897 chr1:184023900 stopgain 0.999 1 24 hm5C_associated_SNPs_59996 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:184023873-184023917
64251 chr2 32865407 32865407 1 + C T UCEC 32865405 + 32865385 32865425 41 GAATCAATCTACAGCCTGACCTCGAAGCCTATACTACTGTT GAATCAATCTACAGCCTGACCTTGAAGCCTATACTACTGTT < 41bp 0.808513710940968 0.538783224114211 0.87860924 0.0795019 prediction 0.539460973653513 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32865405 chr2:32865407 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_59998 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32865400-32865420
64251 chr1 212459015 212459015 1 + G T rs17042034 212459013 + 212458993 212459033 41 AGAGGAGGCTCCAGGCAGGGCGGGCTGCGCTGGCAGCGGCC AGAGGAGGCTCCAGGCAGGGCGTGCTGCGCTGGCAGCGGCC < 41bp 0.839456805390019 0.569728758500491 0.87564915 0.36962825 prediction 0.539456093779056 Functional Loss - PPP2R5A ENSG00000066027 UTR5 Human protein_coding chr1:212459013 chr1:212459015 . . 0 23 hm5C_associated_SNPs_60000 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:212459014-212459015
64251 chr13 114288278 114288278 1 + C T SKCM 114288276 + 114288256 114288296 41 CTAATGGCCATGAACATCATCTCCAAGGAGAAGAAGGAGAT CTAATGGCCATGAACATCATCTTCAAGGAGAAGAAGGAGAT < 41bp 0.769725509100314 0.466507271520454 0.9354595 0.045671374 prediction 0.539451018200628 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114288276 chr13:114288278 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_60003 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:114288240-114288317
64251 chr2 99226258 99226258 1 + G T UCEC 99226256 + 99226236 99226276 41 CTTCAGTGAATTCCTTAGTGCAGGGGAACGGAGTCTTGAAT CTTCAGTGAATTCCTTAGTGCATGGGAACGGAGTCTTGAAT < 41bp 0.769720551049734 0.436843236123313 0.8992234 0.41930085 prediction 0.539441102099468 Functional Loss - UNC50 ENSG00000115446 CDS Human protein_coding chr2:99226256 chr2:99226258 nonsynonymous SNV 0.717 0 23 hm5C_associated_SNPs_60005 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99226227-99226284
64251 chr3 142840960 142840960 1 + G T UCEC 142840957 + 142840937 142840977 41 GACCTGGTGGGAGACCCCGTCAAGACACTACGGAGAGTGTA GACCTGGTGGGAGACCCCGTCAATACACTACGGAGAGTGTA < 41bp 0.769711230837646 0.393418192432157 0.78088903 0.19900358 prediction 0.539422461675293 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840957 chr3:142840960 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_60006 0 0 2 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr7 99725636 99725636 1 + G C CESC 99725632 + 99725612 99725652 41 GGACGAGGATTCGTGGCAGGCACTGAGTGAAGACCCCGCAG GGACGAGGATTCGTGGCAGGCACTCAGTGAAGACCCCGCAG < 41bp 0.78589391721935 0.516226773648063 0.30168813 0.17558828 prediction 0.539334287142574 Functional Loss - MBLAC1 ENSG00000214309 CDS Human protein_coding chr7:99725632 chr7:99725636 synonymous SNV . 0 25 hm5C_associated_SNPs_60010 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:99725619-99725636
64251 chr6 107372395 107372395 1 + G T SARC 107372393 + 107372373 107372413 41 AAAAATACAGAGTGGTGTTACGGCGGTGGAAAAGTTTAAAG AAAAATACAGAGTGGTGTTACGTCGGTGGAAAAGTTTAAAG < 41bp 0.769661074500294 0.460861022617081 0.30582935 0.07161033 prediction 0.539322149000588 Functional Loss - C6orf203 ENSG00000130349 CDS Human protein_coding chr6:107372393 chr6:107372395 synonymous SNV . 0 23 hm5C_associated_SNPs_60011 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:107372324-107372435
64251 chr11 65178880 65178880 1 + A C rs190589959 65178876 + 65178856 65178896 41 GGCGACTGGGGGCCCTGGCCCGGCACTGTCCTCCTGAGGGG GGCGACTGGGGGCCCTGGCCCGGCCCTGTCCTCCTGAGGGG < 41bp 0.888897616133904 0.619273678211942 0.376687 0.31964484 prediction 0.539247875843923 Functional Loss - FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65178876 chr11:65178880 . . 0 25 hm5C_associated_SNPs_60020 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65178836-65178882
64251 chr17 8170432 8170432 1 + G T UCEC 8170430 + 8170410 8170450 41 GGGAGGAGACGAGTTTCCAGCTGGACCGGCTACAGGCAGAG GGGAGGAGACGAGTTTCCAGCTTGACCGGCTACAGGCAGAG < 41bp 0.866856391576251 0.597241054856807 0.42887086 0.24070841 prediction 0.539230673438888 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170430 chr17:8170432 synonymous SNV . 0 23 hm5C_associated_SNPs_60021 0 0 8 BUD13 POSTAR2 ENCODE chr17:8170342-8170446
64251 chrX 135290072 135290072 1 + G T LUAD 135290069 + 135290049 135290089 41 AAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAA AAAGGGGAGGACTTCTACTGCGTTACTTGCCATGAGACCAA < 41bp 0.769608266408447 0.413317039054032 0.16713905 0.114833176 prediction 0.539216532816893 Functional Loss - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135290069 chrX:135290072 synonymous SNV . 0 24 hm5C_associated_SNPs_60023 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135290030-135290077
64251 chr11 65048613 65048613 1 + G T GBM 65048611 + 65048591 65048631 41 TAAGGAATATTCTCTGTTTCCTGGACAGGTGAGATTGGAGG TAAGGAATATTCTCTGTTTCCTTGACAGGTGAGATTGGAGG < 41bp 0.769605792869598 0.442491785369634 0.23643464 0.20050085 prediction 0.539211585739196 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048611 chr11:65048613 stopgain 0.995 1 23 hm5C_associated_SNPs_60024 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65048577-65048613
64251 chr11 65048614 65048614 1 + G T SARC 65048611 + 65048591 65048631 41 TAAGGAATATTCTCTGTTTCCTGGACAGGTGAGATTGGAGG TAAGGAATATTCTCTGTTTCCTGTACAGGTGAGATTGGAGG < 41bp 0.769605792869598 0.392552889347332 0.23643464 0.14138213 prediction 0.539211585739196 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048611 chr11:65048614 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_60025 0 0 4 DDX24 POSTAR2 ENCODE chr11:65048604-65048621
64251 chr12 57849355 57849355 1 + G T THYM 57849353 + 57849333 57849373 41 ATGTCCAGCTCTGGCTGGTGCTGCTGTGGGCACTGGTGCGA ATGTCCAGCTCTGGCTGGTGCTTCTGTGGGCACTGGTGCGA < 41bp 0.769601434496711 0.424805331783865 0.11027655 0.072246194 prediction 0.539202868993422 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57849353 chr12:57849355 synonymous SNV . 0 23 hm5C_associated_SNPs_60027 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:57849350-57849374
64251 chr17 80010250 80010250 1 + G T SARC 80010248 + 80010228 80010268 41 GATCTGTACTGCACCCCTCACAGCAGTAGGTCAGACCTCGT GATCTGTACTGCACCCCTCACATCAGTAGGTCAGACCTCGT < 41bp 0.854539354146499 0.584972980493873 0.85499907 0.3279616 prediction 0.539132747305251 Functional Loss - GPS1;GPS1 ENSG00000169727;ENSG00000169727 exonic;splicing Human other chr17:80010248 chr17:80010250 nonsynonymous SNV 0.282 1 23 hm5C_associated_SNPs_60038 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80010223-80010261
64251 chr7 100211254 100211254 1 + G T LUAD 100211251 + 100211231 100211271 41 CAGCGTACCCCCTTGAGCTTCAGGGACAGCCAGATCCAGCG CAGCGTACCCCCTTGAGCTTCAGTGACAGCCAGATCCAGCG < 41bp 0.769566249213099 0.373172637273665 0.9318958 0.29038104 prediction 0.539132498426199 Functional Loss - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100211251 chr7:100211254 stopgain 0.952 0 24 hm5C_associated_SNPs_60039 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:100211223-100211303
64251 chrX 48759277 48759277 1 + G C BLCA 48759276 + 48759256 48759296 41 TCCCCACATGACCCCAACTCCGTGGTTACCAAATCGGCCAA TCCCCACATGACCCCAACTCCCTGGTTACCAAATCGGCCAA < 41bp 0.769548753686886 0.484382510908325 0.8613395 0.26710618 prediction 0.539097507373773 Functional Loss - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759276 chrX:48759277 nonsynonymous SNV 0.747 1 22 hm5C_associated_SNPs_60042 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr22 50962167 50962167 1 - G A SKCM 50962169 - 50962149 50962189 41 CAGGACTACATCGTGGACCACTCCATTGCCATCTACCTGCT CAGGACTACATCGTGGACCACTTCATTGCCATCTACCTGCT < 41bp 0.76950237060417 0.499398096049193 0.97096694 0.8596134 prediction 0.539004741208341 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962169 chr22:50962167 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60053 1 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50962127-50962198
64251 chr10 127442353 127442353 1 + C T PAAD 127442351 + 127442331 127442371 41 ACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCC ACTCCTCAGTATATTTGAGTCTTGGTTGTCATTTCTTCTCC < 41bp 0.769487058888918 0.498791796886977 0.31003922 0.3462572 prediction 0.538974117777836 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127442351 chr10:127442353 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_60055 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:127442340-127442360
64251 chr19 17844011 17844011 1 + G T SARC 17844009 + 17843989 17844029 41 CCCCCGCCCGCAGGGTCAGCCAGCAGCCGGCCCGGGGTGTC CCCCCGCCCGCAGGGTCAGCCATCAGCCGGCCCGGGGTGTC < 41bp 0.871143047463181 0.601679316605094 0.5176109 0.2024365 prediction 0.538927461716175 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17844009 chr19:17844011 nonsynonymous SNV 0.029 1 23 hm5C_associated_SNPs_60057 0 0 1 BUD13 POSTAR2 ENCODE chr19:17843971-17844056
64251 chr1 52253125 52253125 1 + G T UCEC 52253122 + 52253102 52253142 41 AAAGACAAAGAGCAGAAGCCCGAGAAAGGAAGGAGAAGGAA AAAGACAAAGAGCAGAAGCCCGATAAAGGAAGGAGAAGGAA < 41bp 0.769462840997408 0.408102146426035 0.31875685 0.16508538 prediction 0.538925681994816 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52253122 chr1:52253125 stopgain 1.000 1 24 hm5C_associated_SNPs_60059 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:52253114-52253159
64251 chr22 20113863 20113863 1 + G T COAD 20113860 + 20113840 20113880 41 AAAACAAAGTTTGAAGAATGCAGGAAAGAGATCGAAGAGAG AAAACAAAGTTTGAAGAATGCAGTAAAGAGATCGAAGAGAG < 41bp 0.895777553173049 0.626315088114902 0.2630693 0.07192859 prediction 0.538924930116293 Functional Loss - RANBP1 ENSG00000099901 CDS Human protein_coding chr22:20113860 chr22:20113863 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60060 0 0 6 GRWD1 POSTAR2 ENCODE chr22:20113828-20113893
64251 chr2 131103658 131103658 1 + C T PRAD 131103656 + 131103636 131103676 41 AGCCACCGGGTCATCACCTTCGCAAACCAGGACGACTACAT AGCCACCGGGTCATCACCTTCGTAAACCAGGACGACTACAT < 41bp 0.785215179083669 0.515766445554539 0.2733139 0.35922468 prediction 0.538897467058259 Functional Loss - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103656 chr2:131103658 nonsynonymous SNV 0.956 1 23 hm5C_associated_SNPs_60063 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:131103628-131103669
64251 chr1 229438699 229438699 1 + C T HNSC 229438697 + 229438677 229438717 41 TCACCGCGGCGCGCACAGGCCCCGAACGCTCAGGAGTGTGG TCACCGCGGCGCGCACAGGCCCTGAACGCTCAGGAGTGTGG < 41bp 0.76943575848047 0.495190654637682 0.01740256 0.023478627 prediction 0.538871516960939 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229438697 chr1:229438699 nonsynonymous SNV 0.187 1 23 hm5C_associated_SNPs_60066 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:229438623-229438725
64251 chr17 7577143 7577143 1 - C A HNSC 7577145 - 7577125 7577165 41 TCCTGAGTAGTGGTAATCTACTGGGACGGAACAGCTTTGAG TCCTGAGTAGTGGTAATCTACTTGGACGGAACAGCTTTGAG < 41bp 0.822440274171148 0.553020149810722 0.15240294 0.07381025 prediction 0.538840248720853 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577145 chr17:7577143 synonymous SNV . 0 23 hm5C_associated_SNPs_60069 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:7577118-7577151
64251 chr10 70967668 70967668 1 + C T UCEC 70967666 + 70967646 70967686 41 TCATGGATCTTGAAGCTGTCCACGATGTCTTGGATCTTTAC TCATGGATCTTGAAGCTGTCCATGATGTCTTGGATCTTTAC < 41bp 0.791730478603958 0.522316986355272 0.03987041 0.025459975 prediction 0.538826984497372 Functional Loss - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70967666 chr10:70967668 synonymous SNV . 0 23 hm5C_associated_SNPs_60071 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:70967632-70967683
64251 chr1 117617783 117617783 1 + G T UCEC 117617780 + 117617760 117617800 41 AGAAAAAACAATCTGTAGTTCAAGAGAAGAAGCAAGAAGAG AGAAAAAACAATCTGTAGTTCAATAGAAGAAGCAAGAAGAG < 41bp 0.769398237276043 0.390584241947005 0.87291056 0.33371013 prediction 0.538796474552085 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117617780 chr1:117617783 stopgain 0.016 0 24 hm5C_associated_SNPs_60075 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:117617768-117617792
64251 chr6 4937869 4937869 1 + C T UCEC 4937867 + 4937847 4937887 41 AGCAAGCTGGTACTGCTCAGCGCCGTTGGCAGCGTCTTCTG AGCAAGCTGGTACTGCTCAGCGTCGTTGGCAGCGTCTTCTG < 41bp 0.78756195361621 0.518169189227001 0.17420712 0.16331062 prediction 0.538785528778418 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4937867 chr6:4937869 nonsynonymous SNV 0.803 3 23 hm5C_associated_SNPs_60076 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr6:4937844-4937887
64251 chr3 160964132 160964132 1 + C T STAD 160964130 + 160964110 160964150 41 TCTTTCCTCTTAAGCATACCCTCGGGGAAGTCTGGGTACAG TCTTTCCTCTTAAGCATACCCTTGGGGAAGTCTGGGTACAG < 41bp 0.76934437023031 0.496565329249039 0.03392622 0.033126354 prediction 0.53868874046062 Functional Loss - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160964130 chr3:160964132 synonymous SNV . 0 23 hm5C_associated_SNPs_60082 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:160964120-160964140
64251 chr10 43882237 43882237 1 - C A COAD 43882239 - 43882219 43882259 41 ACTCTTCTTGAATTCAACAACAGGGGCCAGCAATGGGGCGT ACTCTTCTTGAATTCAACAACATGGGCCAGCAATGGGGCGT < 41bp 0.867055711251159 0.597732158272381 0.89625895 0.20780805 prediction 0.538647105957556 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882239 chr10:43882237 nonsynonymous SNV 0.008 4 23 hm5C_associated_SNPs_60085 0 0 28 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:43882034-43882243
64251 chr15 40707145 40707145 1 + A T KIRC 40707141 + 40707121 40707161 41 TCTACGTGCTGATGAGTGGGCTGGACCTGGAGCGGCTGGTG TCTACGTGCTGATGAGTGGGCTGGTCCTGGAGCGGCTGGTG < 41bp 0.859128386141533 0.589816676640572 0.84582937 0.51387566 prediction 0.538623419001921 Functional Loss - IVD ENSG00000128928 CDS Human protein_coding chr15:40707141 chr15:40707145 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_60087 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:40707120-40707154
64251 chr13 21141324 21141324 1 + G C rs140349726 21141320 + 21141300 21141340 41 GATTCCGCGCTTGGCAACGGCTCGGCGTCGCGCTTTGGCCA GATTCCGCGCTTGGCAACGGCTCGCCGTCGCGCTTTGGCCA < 41bp 0.787405269488175 0.518098610361165 0.29803193 0.17581579 prediction 0.53861331825402 Functional Loss - IFT88 ENSG00000032742 UTR5 Human protein_coding chr13:21141320 chr13:21141324 . . 0 25 hm5C_associated_SNPs_60089 0 0 4 DDX3X POSTAR2 ENCODE chr13:21141282-21141388
64251 chr12 58087953 58087953 1 + G C STAD 58087949 + 58087929 58087969 41 AGAAGGGGAACGAAAGATGGCGGCGGAAACGCTGCTGTCCA AGAAGGGGAACGAAAGATGGCGGCCGAAACGCTGCTGTCCA < 41bp 0.76930651785877 0.487461784756971 0.8497423 0.51504856 prediction 0.53861303571754 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58087949 chr12:58087953 synonymous SNV . 0 25 hm5C_associated_SNPs_60090 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:58087920-58087960
64251 chr19 58992000 58992000 1 + G T SARC 58991998 + 58991978 58992018 41 ACCGCAAGAGCCACACAGGCCAGCGGCGTCACTTCTGCAGT ACCGCAAGAGCCACACAGGCCATCGGCGTCACTTCTGCAGT < 41bp 0.769277265438404 0.442377337212308 0.46513045 0.16361442 prediction 0.538554530876808 Functional Loss - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58991998 chr19:58992000 nonsynonymous SNV 0.991 2 23 hm5C_associated_SNPs_60094 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:58992000-58992020
64251 chr2 220379567 220379567 1 + G T UCEC 220379564 + 220379544 220379584 41 TTGCCCCTGGAGCAGCCCCCCGAGACCTGGCCACCTTTGCC TTGCCCCTGGAGCAGCCCCCCGATACCTGGCCACCTTTGCC < 41bp 0.76925153848052 0.37748306634527 0.88296014 0.45436776 prediction 0.53850307696104 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379564 chr2:220379567 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_60102 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379542-220379620
64251 chr19 39898644 39898644 1 + G T LUSC 39898642 + 39898622 39898662 41 ACCCTCACCCACTTCGCCCACTGCAACCTCCACCACCCCCT ACCCTCACCCACTTCGCCCACTTCAACCTCCACCACCCCCT < 41bp 0.769249225260447 0.437344702483116 0.056122124 0.006005764 prediction 0.538498450520893 Functional Loss - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898642 chr19:39898644 nonsynonymous SNV 0.027 0 23 hm5C_associated_SNPs_60103 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:39898644-39898677
64251 chr19 57079092 57079092 1 + G C rs144338646 57079091 + 57079071 57079111 41 CGGCCCGGTGTGTGACTGTCCGGTGCGTGGCCGCGAATCTG CGGCCCGGTGTGTGACTGTCCCGTGCGTGGCCGCGAATCTG < 41bp 0.769232058807186 0.498721182122762 0.7807627 0.2994634 prediction 0.538464117614373 Functional Loss - ZNF470 ENSG00000197016 UTR5 Human protein_coding chr19:57079091 chr19:57079092 . . 0 22 hm5C_associated_SNPs_60106 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:57079078-57079106
64251 chr4 25351147 25351147 1 + G T LUAD 25351144 + 25351124 25351164 41 AAGTATGCAGAGCATTTTTACAGGAAGATAAAGGCGAAGGA AAGTATGCAGAGCATTTTTACAGTAAGATAAAGGCGAAGGA < 41bp 0.809443933121422 0.540231880319032 0.56120205 0.31644636 prediction 0.53842410560478 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25351144 chr4:25351147 stopgain 1.000 1 24 hm5C_associated_SNPs_60107 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067862 chr4:25351135-25351160
64251 chr17 46973046 46973046 1 + C T SKCM 46973044 + 46973024 46973064 41 TCTCTCAAGCAGCAGCTCTTCTCCTATGCCATTCTTGGCTT TCTCTCAAGCAGCAGCTCTTCTTCTATGCCATTCTTGGCTT < 41bp 0.769201660227871 0.498884128176733 0.34139323 0.13115981 prediction 0.538403320455741 Functional Loss - ATP5G1 ENSG00000159199 CDS Human protein_coding chr17:46973044 chr17:46973046 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_60111 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:46973020-46973060
64251 chr8 145535786 145535786 1 + C T UCEC 145535784 + 145535764 145535804 41 TCCCCGACCGCCCTCATTGACTCCATCCTGCGGGAGAGTGA TCCCCGACCGCCCTCATTGACTTCATCCTGCGGGAGAGTGA < 41bp 0.773431060009406 0.504238431786946 0.95351493 0.050519675 prediction 0.53838525644492 Functional Loss - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535784 chr8:145535786 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60114 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:145535785-145535786
64251 chr10 28970967 28970967 1 + G T GBM 28970965 + 28970945 28970985 41 GAAACCTTATCACCAAGGTGCAGGAGCTGACTTCTTCCAAA GAAACCTTATCACCAAGGTGCATGAGCTGACTTCTTCCAAA < 41bp 0.769179499201292 0.439707138158042 0.49029392 0.087150335 prediction 0.538358998402583 Functional Loss - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28970965 chr10:28970967 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_60115 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:28970947-28970973
64251 chr20 43118196 43118196 1 + G C rs200489134 43118192 + 43118172 43118212 41 CCTGCTACTAGCCCGTCCCCCAGGGTCACCATCTTTAATTC CCTGCTACTAGCCCGTCCCCCAGGCTCACCATCTTTAATTC < 41bp 0.769175475028547 0.476397911124865 0.8178757 0.46518615 prediction 0.538350950057094 Functional Loss - TTPAL ENSG00000124120 UTR3 Human protein_coding chr20:43118192 chr20:43118196 . . 0 25 hm5C_associated_SNPs_60116 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714637 chr20:43118196-43118229
64251 chr1 114515777 114515777 1 + G T GBM 114515774 + 114515754 114515794 41 CAGCATGGCAGCCCGCTACACTCGACAGGGCACCCACACCT CAGCATGGCAGCCCGCTACACTCTACAGGGCACCCACACCT < 41bp 0.889978009362824 0.620808772386106 0.23911649 0.8970065 prediction 0.538338473953436 Functional Loss - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515774 chr1:114515777 synonymous SNV . 0 24 hm5C_associated_SNPs_60117 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:114515770-114515818
64251 chr16 69922032 69922032 1 + C T rs78426175 69922030 + 69922010 69922050 41 GCTGCACCCTTGAGTGTGACCCCGAATCCCAACACGACTTC GCTGCACCCTTGAGTGTGACCCTGAATCCCAACACGACTTC < 41bp 0.775895427663131 0.506738811760028 0.10168207 0.07809949 prediction 0.538313231806206 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69922030 chr16:69922032 nonsynonymous SNV 0.124 0 23 hm5C_associated_SNPs_60120 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr16:69922010-69922033
64251 chr1 9780880 9780880 1 + G T SARC 9780878 + 9780858 9780898 41 AGAAGGACCTGGTGTGGAAGCTGCGGCATGAAGTCCAGGAG AGAAGGACCTGGTGTGGAAGCTTCGGCATGAAGTCCAGGAG < 41bp 0.769147636771618 0.427519087142709 0.75856864 0.42695984 prediction 0.538295273543237 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9780878 chr1:9780880 synonymous SNV . 0 23 hm5C_associated_SNPs_60121 0 0 2 DDX24 POSTAR2 ENCODE chr1:9780816-9780892
64251 chr17 37618409 37618409 1 + A T LUSC 37618405 + 37618385 37618425 41 TTGCAGCCGTCATCGGGAGGCGGCAGCTCTAACAGCAGAGA TTGCAGCCGTCATCGGGAGGCGGCTGCTCTAACAGCAGAGA < 41bp 0.769103172405589 0.458352000318333 0.921988 0.91672444 prediction 0.538206344811178 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37618405 chr17:37618409 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_60133 0 0 16 EIF3D POSTAR2 ENCODE chr17:37618370-37618427
64251 chr3 52522553 52522553 1 + G T UCEC 52522550 + 52522530 52522570 41 CTGAAGACTGTGGTCATCGCCAAGACCCCCGGGACGGGAGG CTGAAGACTGTGGTCATCGCCAATACCCCCGGGACGGGAGG < 41bp 0.769090223622658 0.391495655624773 0.43484062 0.120833576 prediction 0.538180447245316 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52522550 chr3:52522553 nonsynonymous SNV 0.885 4 24 hm5C_associated_SNPs_60136 0 0 5 BUD13 POSTAR2 ENCODE chr3:52522552-52522619
64251 chr21 34635466 34635466 1 + G T UCEC 34635464 + 34635444 34635484 41 AGAGGAGAAAGAGTCCACTCCAGGACCCTTTTCCCGAAGAG AGAGGAGAAAGAGTCCACTCCATGACCCTTTTCCCGAAGAG < 41bp 0.769088722864983 0.453614976080032 0.1672591 0.017856002 prediction 0.538177445729965 Functional Loss - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635464 chr21:34635466 nonsynonymous SNV 0.014 2 23 hm5C_associated_SNPs_60137 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:34635456-34635479
64251 chr19 54377621 54377621 1 + A C BLCA 54377617 + 54377597 54377637 41 CGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGCCATGCCTA CGGCGCTCGAGAGATGTAAGCTGCCGCCGCAGCCATGCCTA < 41bp 0.912273642203781 0.643194147218709 0.90114677 0.8761977 prediction 0.538158989970145 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377617 chr19:54377621 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_60138 0 0 2 SND1 POSTAR2 ENCODE chr19:54377621-54377632
64251 chr1 114449713 114449713 1 + C T rs547539348 114449711 + 114449691 114449731 41 AGACCATGACCGTAACCCTCCTCGATGCCAATCACTGTCCT AGACCATGACCGTAACCCTCCTTGATGCCAATCACTGTCCT < 41bp 0.769078341948064 0.479387960183059 0.5273662 0.10277295 prediction 0.538156683896128 Functional Loss - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114449711 chr1:114449713 synonymous SNV . 0 23 hm5C_associated_SNPs_60139 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:114449679-114449714
64251 chr1 114449714 114449714 1 + G T MESO 114449711 + 114449691 114449731 41 AGACCATGACCGTAACCCTCCTCGATGCCAATCACTGTCCT AGACCATGACCGTAACCCTCCTCTATGCCAATCACTGTCCT < 41bp 0.769078341948064 0.401807393472375 0.5273662 0.8983357 prediction 0.538156683896128 Functional Loss - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114449711 chr1:114449714 nonsynonymous SNV 0.966 4 24 hm5C_associated_SNPs_60140 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:114449679-114449714
64251 chr14 75359641 75359641 1 + C T HNSC 75359639 + 75359619 75359659 41 CCCTGCAGCACCCATACCCACTCAGATGCCACCGGTGCCCT CCCTGCAGCACCCATACCCACTTAGATGCCACCGGTGCCCT < 41bp 0.774826753738544 0.505767387130458 0.016706973 0.044695407 prediction 0.538118733216173 Functional Loss - DLST ENSG00000119689 CDS Human protein_coding chr14:75359639 chr14:75359641 stopgain 0.985 0 23 hm5C_associated_SNPs_60143 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:75359614-75359643
64251 chr17 73008804 73008804 1 + G C rs3744206 73008803 + 73008783 73008823 41 TGGCGGCCACCAGGTGCCTGCGCTGGGGCCTGAGCCGAGCC TGGCGGCCACCAGGTGCCTGCCCTGGGGCCTGAGCCGAGCC < 41bp 0.826619662913228 0.557567684621073 0.43488568 0.27877855 prediction 0.53810395658431 Functional Loss - MRPL58 ENSG00000167862 CDS Human protein_coding chr17:73008803 chr17:73008804 nonsynonymous SNV 0.032 0 22 hm5C_associated_SNPs_60144 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:73008800-73008820
64251 chr18 59854894 59854894 1 + G C rs200431709 59854893 + 59854873 59854913 41 TGGCCTAGATCCTGGCTCTGCGGGCTCGCTGTCGCCACAGG TGGCCTAGATCCTGGCTCTGCCGGCTCGCTGTCGCCACAGG < 41bp 0.769022275336142 0.473862196176022 0.86286664 0.20731279 prediction 0.538044550672284 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59854893 chr18:59854894 synonymous SNV . 0 22 hm5C_associated_SNPs_60148 0 0 2 EIF3H POSTAR2 ENCODE chr18:59854839-59854959
64251 chr18 59854895 59854895 1 + G T LUSC 59854893 + 59854873 59854913 41 TGGCCTAGATCCTGGCTCTGCGGGCTCGCTGTCGCCACAGG TGGCCTAGATCCTGGCTCTGCGTGCTCGCTGTCGCCACAGG < 41bp 0.769022275336142 0.423909895461107 0.86286664 0.22172844 prediction 0.538044550672284 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59854893 chr18:59854895 nonsynonymous SNV 0.924 1 23 hm5C_associated_SNPs_60149 0 0 2 EIF3H POSTAR2 ENCODE chr18:59854839-59854959
64251 chr20 18464161 18464161 1 + C T HNSC 18464159 + 18464139 18464179 41 CCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACA CCACGAAGGTGGTGAGATTTCATCATCTAACTGTATTTACA < 41bp 0.773197136540439 0.504216014540599 0.10161233 0.09017047 prediction 0.537962243999678 Functional Loss - POLR3F ENSG00000132664 CDS Human protein_coding chr20:18464159 chr20:18464161 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_60152 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:18464121-18464172
64251 chr2 85846412 85846412 1 + G T UCEC 85846410 + 85846390 85846430 41 CCGTACCTGGACACCATTAACAGGTCAGTAGGACAGAGATG CCGTACCTGGACACCATTAACATGTCAGTAGGACAGAGATG < 41bp 0.768975234773419 0.446114617180474 0.91560286 0.6814921 prediction 0.537950469546838 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85846410 chr2:85846412 nonsynonymous SNV 0.614 4 23 hm5C_associated_SNPs_60153 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:85846400-85846420
64251 chr11 6415560 6415560 1 + G T STAD 6415558 + 6415538 6415578 41 CCGCACTGGCAGCTTCTCTACAGGGCTCGAGAAACCTATGG CCGCACTGGCAGCTTCTCTACATGGCTCGAGAAACCTATGG < 41bp 0.868804569647735 0.599848000610557 0.2793272 0.110707104 prediction 0.537913138074356 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415558 chr11:6415560 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_60157 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:6415532-6415600
64251 chr8 11683626 11683626 1 + G T GBM 11683624 + 11683604 11683644 41 CCCCTTAGTTGGTGAAGATACAGAACGTGCCAACTCTATGG CCCCTTAGTTGGTGAAGATACATAACGTGCCAACTCTATGG < 41bp 0.851598485485299 0.582654576254117 0.07065469 0.03715557 prediction 0.537887818462364 Functional Loss - FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11683624 chr8:11683626 stopgain 0.182 1 23 hm5C_associated_SNPs_60162 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:11683596-11683635
64251 chr19 34935998 34935998 1 + G T COAD 34935995 + 34935975 34936015 41 TAAGGAATGGGCTAAATCAACTGGATATGATCCAGTTAAAC TAAGGAATGGGCTAAATCAACTGTATATGATCCAGTTAAAC < 41bp 0.768938978998744 0.40618275984223 0.30586556 0.15298611 prediction 0.537877957997487 Functional Loss - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34935995 chr19:34935998 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60163 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34935909-34936219
64251 chr5 52778823 52778823 1 + G C BLCA 52778822 + 52778802 52778842 41 CGGCTGAGCACCTCGTGGACCGAGGAGGACGTGAATGACAA CGGCTGAGCACCTCGTGGACCCAGGAGGACGTGAATGACAA < 41bp 0.82335610159731 0.554424166355134 0.48075876 0.2679416 prediction 0.537863870484352 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52778822 chr5:52778823 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_60166 0 0 3 DDX3X POSTAR2 ENCODE chr5:52778776-52778825
64251 chr2 44428987 44428987 1 + G T UCEC 44428985 + 44428965 44429005 41 TGTTGATGGCAAGGGCCCAACAGAACAACTTGTTTCTCCAG TGTTGATGGCAAGGGCCCAACATAACAACTTGTTTCTCCAG < 41bp 0.768923129605936 0.447419046366144 0.81809145 0.2897635 prediction 0.537846259211872 Functional Loss - PPM1B ENSG00000138032 CDS Human protein_coding chr2:44428985 chr2:44428987 stopgain 0.998 1 23 hm5C_associated_SNPs_60167 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr2:44428957-44428987
64251 chr16 14738401 14738401 1 + G C BLCA 14738397 + 14738377 14738417 41 TGCTTTATGGTGGGCATCTTCAAAGAAAACAGAATGTCCAG TGCTTTATGGTGGGCATCTTCAAACAAAACAGAATGTCCAG < 41bp 0.782125922874257 0.51320444937455 0.40037748 0.35164753 prediction 0.537842946999414 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14738397 chr16:14738401 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_60168 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:14738378-14738401
64251 chr5 162944664 162944664 1 + G T SARC 162944662 + 162944642 162944682 41 GCAGATGCCTTCAACCTCCCCAGCAGTCACTTAAGACCTGT GCAGATGCCTTCAACCTCCCCATCAGTCACTTAAGACCTGT < 41bp 0.835520911532874 0.56661696401956 0.20051968 0.052256405 prediction 0.537807895026629 Functional Loss - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162944662 chr5:162944664 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_60174 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:162944642-162944664
64251 chr19 13059912 13059912 1 + C T SKCM 13059910 + 13059890 13059930 41 GACAGGGAATTCCTGGGAGCCCCGAGCCGGAACACGGTTCT GACAGGGAATTCCTGGGAGCCCTGAGCCGGAACACGGTTCT < 41bp 0.776821132179272 0.50792007980381 0.15286595 0.11430627 prediction 0.537802104750924 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059910 chr19:13059912 synonymous SNV . 0 23 hm5C_associated_SNPs_60175 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13059896-13059918
64251 chr10 20436753 20436753 1 + G T STAD 20436751 + 20436731 20436771 41 AGTGGGACCATGTACATCTCCAGGATAATTATAACCTGGGA AGTGGGACCATGTACATCTCCATGATAATTATAACCTGGGA < 41bp 0.768884847432766 0.44780477011292 0.50192857 0.115753114 prediction 0.537769694865531 Functional Loss - PLXDC2 ENSG00000120594 CDS Human protein_coding chr10:20436751 chr10:20436753 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_60178 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:20436713-20436753
64251 chr17 54925355 54925355 1 + C T SKCM 54925353 + 54925333 54925373 41 TCTTCTCCCATATTATTCAGCTCGAGTACTTGTTTGTGGAG TCTTCTCCCATATTATTCAGCTTGAGTACTTGTTTGTGGAG < 41bp 0.768854909489787 0.478978702480194 0.067977875 0.02626267 prediction 0.537709818979574 Functional Loss - DGKE ENSG00000153933 CDS Human protein_coding chr17:54925353 chr17:54925355 stopgain 0.999 1 23 hm5C_associated_SNPs_60181 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:54925351-54925368
64251 chr19 54634744 54634744 1 + G T LUAD 54634741 + 54634721 54634761 41 CTCCCTCACCTGCCCAGGGCCTGGAGATTGTGAACCCACAG CTCCCTCACCTGCCCAGGGCCTGTAGATTGTGAACCCACAG < 41bp 0.900621710508543 0.631775143692543 0.20586276 0.056529194 prediction 0.537693133632001 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54634741 chr19:54634744 stopgain 0.950 1 24 hm5C_associated_SNPs_60182 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:54634740-54634760
64251 chr15 90164725 90164725 1 + C T COAD 90164723 + 90164703 90164743 41 CCCCTCAGAAAAGGGTTCAGCTCGAATGAAAAAGCGTTCAA CCCCTCAGAAAAGGGTTCAGCTTGAATGAAAAAGCGTTCAA < 41bp 0.792453786722516 0.523608400355096 0.2842341 0.11843857 prediction 0.53769077273484 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90164723 chr15:90164725 stopgain 0.047 0 23 hm5C_associated_SNPs_60183 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90164697-90164741
64251 chr19 2426037 2426037 1 - C A rs7252121 2426040 - 2426020 2426060 41 AGCCTCTCACAGCTGCCACCCGGGTATAGACACCTGGGAAG AGCCTCTCACAGCTGCCACCCGGTTATAGACACCTGGGAAG < 41bp 0.768831704464956 0.412436351567865 0.8415084 0.26603594 prediction 0.537663408929911 Functional Loss - TMPRSS9 ENSG00000178297 CDS Human protein_coding chr19:2426040 chr19:2426037 nonsynonymous SNV 0.590 4 24 hm5C_associated_SNPs_60189 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:2426020-2426040
64251 chr1 2493124 2493124 1 + G T LIHC 2493122 + 2493102 2493142 41 ACTCCCGCAGGTGCAGCTGGCTGGTGACGAAGGCCGGAGCT ACTCCCGCAGGTGCAGCTGGCTTGTGACGAAGGCCGGAGCT < 41bp 0.866400792690024 0.597574095515613 0.88228905 0.27609742 prediction 0.537653394348822 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2493122 chr1:2493124 synonymous SNV . 0 23 hm5C_associated_SNPs_60190 0 0 1 PPIG POSTAR2 ENCODE chr1:2493115-2493161
64251 chr11 82917163 82917163 1 + G T GBM 82917161 + 82917141 82917181 41 CGTAACAACGAGAGGTTGGACAGCATCTCACATAGCTGCAA CGTAACAACGAGAGGTTGGACATCATCTCACATAGCTGCAA < 41bp 0.857196084207296 0.588393300053474 0.46654624 0.40696055 prediction 0.537605568307644 Functional Loss - ANKRD42 ENSG00000137494 CDS Human protein_coding chr11:82917161 chr11:82917163 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_60194 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:82917146-82917168
64251 chr22 42950004 42950004 1 + A C rs140910717 42950000 + 42949980 42950020 41 AGCCAGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGACG AGCCAGGCGTGAGGGAGTGACAGCCGCGCATTCGCGGGACG < 41bp 0.891705971730602 0.622907428827678 0.8323398 0.73509336 prediction 0.537597085805847 Functional Loss - SERHL2 ENSG00000183569 UTR5 Human protein_coding chr22:42950000 chr22:42950004 . . 0 25 hm5C_associated_SNPs_60196 0 0 1 DDX3X POSTAR2 ENCODE chr22:42949965-42950049
64251 chr19 36035831 36035831 1 - C G HNSC 36035832 - 36035812 36035852 41 GATGGACGAGTGGGTATCACCGAGGAAGTCCGTAGAGACGA GATGGACGAGTGGGTATCACCCAGGAAGTCCGTAGAGACGA < 41bp 0.840108679610462 0.571320634684227 0.7584282 0.16210619 prediction 0.537576089852469 Functional Loss - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36035832 chr19:36035831 synonymous SNV . 0 22 hm5C_associated_SNPs_60197 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:36035769-36035876
64251 chr4 146031360 146031360 1 + C T SKCM 146031358 + 146031338 146031378 41 CCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTC CCTAAAAGCCATCATCAAACCTTAATATGTAGACCAGATTC < 41bp 0.77412864683755 0.505340949157553 0.104439735 0.05728677 prediction 0.537575395359993 Functional Loss - ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146031358 chr4:146031360 stopgain 0.998 1 23 hm5C_associated_SNPs_60198 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr4:146031340-146031360
64251 chr3 158363451 158363451 1 + G T COAD 158363449 + 158363429 158363469 41 GGCCTGCCGATGGTCTTCATCAGGGGTGATTCCTAATGAAA GGCCTGCCGATGGTCTTCATCATGGGTGATTCCTAATGAAA < 41bp 0.848112928220077 0.579367547934578 0.96896917 0.92666537 prediction 0.537490760570996 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158363449 chr3:158363451 nonsynonymous SNV 0.986 3 23 hm5C_associated_SNPs_60204 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:158363420-158363458
64251 chr2 97020025 97020025 1 + G T LIHC 97020023 + 97020003 97020043 41 GAGACTTCCCCGATGGGTCCCTGGGGGATGACTTTGATGCC GAGACTTCCCCGATGGGTCCCTTGGGGATGACTTTGATGCC < 41bp 0.768740019965852 0.431604440303031 0.39012223 0.013222218 prediction 0.537480039931704 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97020023 chr2:97020025 synonymous SNV . 0 23 hm5C_associated_SNPs_60207 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:97019964-97020026
64251 chr21 46624492 46624492 1 + G T LUAD 46624489 + 46624469 46624509 41 GCTGGAACGTGGTGGGCATCCAGGGATCCCTGCTCAGCATT GCTGGAACGTGGTGGGCATCCAGTGATCCCTGCTCAGCATT < 41bp 0.901323821167089 0.632590869810578 0.9383199 0.20892447 prediction 0.537465902713023 Functional Loss - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46624489 chr21:46624492 stopgain 0.989 1 24 hm5C_associated_SNPs_60208 0 0 2 BUD13 POSTAR2 ENCODE chr21:46624436-46624502
64251 chr16 841339 841339 1 + G T STAD 841336 + 841316 841356 41 GCTGGAGGAGATGCTGGAGGCTGGGCTGGACCCGAGCCAGC GCTGGAGGAGATGCTGGAGGCTGTGCTGGACCCGAGCCAGC < 41bp 0.768728951320218 0.466182956980431 0.88171256 0.6384535 prediction 0.537457902640436 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:841336 chr16:841339 nonsynonymous SNV 0.630 2 24 hm5C_associated_SNPs_60209 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:841306-841344
64251 chr20 330327 330327 1 + G T HNSC 330324 + 330304 330344 41 ATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGAT ATCGTTCCTGCAGCTGCAGCCGCTGCCCCAGCGTGGAGGAT < 41bp 0.768715360808922 0.378100332172828 0.866611 0.46497905 prediction 0.537430721617844 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330324 chr20:330327 nonsynonymous SNV 0.254 3 24 hm5C_associated_SNPs_60210 0 0 1 DDX3X POSTAR2 ENCODE chr20:330297-330361
64251 chr1 155296518 155296518 1 + A C rs571889708 155296514 + 155296494 155296534 41 ACCTGCTCTTTGAGCACCACCACCACCTGCCCCTGGGCCCA ACCTGCTCTTTGAGCACCACCACCCCCTGCCCCTGGGCCCA < 41bp 0.768714093255269 0.353044657351259 0.10393351 0.26564938 prediction 0.537428186510538 Functional Loss - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155296514 chr1:155296518 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_60211 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155296480-155296520
64251 chr19 41268853 41268853 1 + G T LUAD 41268851 + 41268831 41268871 41 CCCGCATTATGCACCACATGCCGGGCCAGCCGCCCTACATG CCCGCATTATGCACCACATGCCTGGCCAGCCGCCCTACATG < 41bp 0.768711952127746 0.41227278310489 0.8742756 0.13522652 prediction 0.537423904255492 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41268851 chr19:41268853 synonymous SNV . 0 23 hm5C_associated_SNPs_60212 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:41268818-41268880
64251 chr1 227947142 227947142 1 + G T GBM 227947139 + 227947119 227947159 41 TGCATTGGTGCTCAGAAGCGCAAGAACCTCTTCCCCCGCAG TGCATTGGTGCTCAGAAGCGCAATAACCTCTTCCCCCGCAG < 41bp 0.768678392442732 0.369830571690862 0.7798575 0.22951561 prediction 0.537356784885464 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227947139 chr1:227947142 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_60215 0 0 4 GRWD1 POSTAR2 ENCODE chr1:227947122-227947191
64251 chr14 59112755 59112755 1 + G T LUAD 59112753 + 59112733 59112773 41 TCGGTGTTCCGCCATTGGGACAGGGGAGTCCCCTAAGGAAA TCGGTGTTCCGCCATTGGGACATGGGAGTCCCCTAAGGAAA < 41bp 0.768673608276839 0.418582590149631 0.83856094 0.5951361 prediction 0.537347216553679 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112753 chr14:59112755 nonsynonymous SNV 0.023 2 23 hm5C_associated_SNPs_60216 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:59112736-59112757
64251 chr11 118245671 118245671 1 + C T SKCM 118245669 + 118245649 118245689 41 GAAGAACTTACTCCAGCTCTCTCCAGAAACCAAACACTGTA GAAGAACTTACTCCAGCTCTCTTCAGAAACCAAACACTGTA < 41bp 0.768668229572105 0.472831836483028 0.9353024 0.023954183 prediction 0.537336459144209 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118245669 chr11:118245671 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_60217 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:118245634-118245681
64251 chr14 57857946 57857946 1 + G T LUSC 57857944 + 57857924 57857964 41 GCTCAACGGATTGATTAGCCCCGAACTGCGGCACCTCCGGG GCTCAACGGATTGATTAGCCCCTAACTGCGGCACCTCCGGG < 41bp 0.768660233251107 0.427306585947257 0.12187949 0.1518367 prediction 0.537320466502215 Functional Loss - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57857944 chr14:57857946 stopgain 0.998 0 23 hm5C_associated_SNPs_60219 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:57857946-57857947
64251 chr14 102391575 102391575 1 + G T UCEC 102391573 + 102391553 102391593 41 AAAGCCTTGGAAGCTCACTGCAGGGCCGATGAGCTGGCCTC AAAGCCTTGGAAGCTCACTGCATGGCCGATGAGCTGGCCTC < 41bp 0.862382679965439 0.593722566843043 0.9004691 0.84262 prediction 0.537320226244792 Functional Loss - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102391573 chr14:102391575 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_60220 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr14:102391569-102391592
64251 chr3 183975448 183975448 1 + C T SKCM 183975446 + 183975426 183975466 41 GTGCTTCTTTTGATGTGGTGCTCGAGAAGGGCACGCTGGAT GTGCTTCTTTTGATGTGGTGCTTGAGAAGGGCACGCTGGAT < 41bp 0.776342813189874 0.507683776106241 0.15466696 0.15361157 prediction 0.537318074167267 Functional Loss - ECE2 ENSG00000145194 CDS Human protein_coding chr3:183975446 chr3:183975448 synonymous SNV . 0 23 hm5C_associated_SNPs_60221 0 0 1 DDX3X POSTAR2 ENCODE chr3:183975358-183975497
64251 chr14 32295907 32295907 1 + G C CESC 32295903 + 32295883 32295923 41 ACAAGGGTGCTGAGATGTTTCGCAGAGTCCACGTGCCCGTA ACAAGGGTGCTGAGATGTTTCGCACAGTCCACGTGCCCGTA < 41bp 0.768645500887721 0.49017875955511 0.31230497 0.123719424 prediction 0.537291001775443 Functional Loss - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32295903 chr14:32295907 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_60226 0 0 5 BUD13 POSTAR2 ENCODE chr14:32295824-32295936
64251 chr16 30095999 30095999 1 + G T BLCA 30095997 + 30095977 30096017 41 TCCGCATCAGACACCACAGGCTGGGGCGTGAGCCCCCGAGG TCCGCATCAGACACCACAGGCTTGGGCGTGAGCCCCCGAGG < 41bp 0.87982263217557 0.611177633131528 0.9018322 0.15602097 prediction 0.537289998088085 Functional Loss - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095997 chr16:30095999 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_60227 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30095986-30096043
64251 chr17 34956134 34956134 1 + C T UCEC 34956132 + 34956112 34956152 41 GGTGTGGTGGAGACACAATTCGCCTTCAAACTCCACGACAA GGTGTGGTGGAGACACAATTCGTCTTCAAACTCCACGACAA < 41bp 0.775062584416389 0.506430121888119 0.054480284 0.058095664 prediction 0.53726492505654 Functional Loss - DHRS11 ENSG00000108272 CDS Human other chr17:34956132 chr17:34956134 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_60228 0 0 2 PPIG POSTAR2 ENCODE chr17:34956083-34956179
64251 chr14 62259546 62259546 1 + A C COAD 62259542 + 62259522 62259562 41 TAGGCAATGTGCAGAATATACACAAGGAAGATAAACCTTTA TAGGCAATGTGCAGAATATACACACGGAAGATAAACCTTTA < 41bp 0.768613307989335 0.379255828178538 0.05264443 0.026103586 prediction 0.537226615978671 Functional Loss - SNAPC1 ENSG00000023608 CDS Human protein_coding chr14:62259542 chr14:62259546 nonsynonymous SNV 0.440 1 25 hm5C_associated_SNPs_60230 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:62259535-62259564
64251 chr6 7404697 7404697 1 + C T PAAD 7404695 + 7404675 7404715 41 CCAGTTATCAGAATCCAAGGCTCGGGAGTTGTACCTGCAGG CCAGTTATCAGAATCCAAGGCTTGGGAGTTGTACCTGCAGG < 41bp 0.774344103408211 0.505736866598206 0.15904987 0.23161376 prediction 0.537214473620011 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7404695 chr6:7404697 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60231 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:7404643-7404704
64251 chr1 110882102 110882102 1 + G C BLCA 110882101 + 110882081 110882121 41 TGCGGTTCCGCTGTGTGAAACGAGCGCGGGGCGGCGGGTTA TGCGGTTCCGCTGTGTGAAACCAGCGCGGGGCGGCGGGTTA < 41bp 0.818376315332043 0.549772199104346 0.85992754 0.8601755 prediction 0.537208232455395 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882101 chr1:110882102 synonymous SNV . 0 22 hm5C_associated_SNPs_60232 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:110882100-110882120
64251 chr5 137802882 137802882 1 + G T UCEC 137802880 + 137802860 137802900 41 CTGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCCCGAC CTGCCGCCAAGGGTGGCTTCCATGTTCCCATGATCCCCGAC < 41bp 0.76859639601159 0.4221189585389 0.76053905 0.11345881 prediction 0.537192792023179 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137802880 chr5:137802882 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_60235 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137802860-137802900
64251 chr7 31125030 31125030 1 + G T UCEC 31125028 + 31125008 31125048 41 ACTGGATTCTGTATGCGGAGCAGGACAGCAACCACTGCTTC ACTGGATTCTGTATGCGGAGCATGACAGCAACCACTGCTTC < 41bp 0.768576039490055 0.41779851524387 0.43258643 0.12102303 prediction 0.53715207898011 Functional Loss - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31125028 chr7:31125030 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_60240 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:31125018-31125058
64251 chr20 62587639 62587639 1 - C G HNSC 62587643 - 62587623 62587663 41 AGACACACCAGGCCGGCAGGCTGAGAAAAGCGAGACCGCGT AGACACACCAGGCCGGCAGGCTGACAAAAGCGAGACCGCGT < 41bp 0.808575225033463 0.540006980909468 0.8811506 0.67353344 prediction 0.537136488247991 Functional Loss - UCKL1 ENSG00000198276 CDS Human protein_coding chr20:62587643 chr20:62587639 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_60243 0 0 2 DDX3X POSTAR2 ENCODE chr20:62587612-62587751
64251 chr5 96350769 96350769 1 + G T LUAD 96350767 + 96350747 96350787 41 TCTATAACCTCCTTGAAAAACTGGGATACATGGATCTGGCC TCTATAACCTCCTTGAAAAACTTGGATACATGGATCTGGCC < 41bp 0.768563483712277 0.435598166288602 0.44768107 0.08502841 prediction 0.537126967424554 Functional Loss - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96350767 chr5:96350769 synonymous SNV . 0 23 hm5C_associated_SNPs_60245 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:96350751-96350774
64251 chr11 60696236 60696236 1 + G C LUSC 60696232 + 60696212 60696252 41 CCTGGGGGCTGTGGCTCCGGCGAGGAGAACGACCCTGGGGA CCTGGGGGCTGTGGCTCCGGCGAGCAGAACGACCCTGGGGA < 41bp 0.803386006504881 0.534851813037055 0.91494226 0.8808047 prediction 0.537068386935652 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696232 chr11:60696236 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_60250 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:60696208-60696237
64251 chr12 125626689 125626689 1 + G T LUAD 125626687 + 125626667 125626707 41 TGCCGTCAAACAGATCATCGCTGGAAAAGCCGTGGAGCAAG TGCCGTCAAACAGATCATCGCTTGAAAAGCCGTGGAGCAAG < 41bp 0.849148725867847 0.580644404278052 0.3427869 0.11921093 prediction 0.53700864317959 Functional Loss - AACS ENSG00000081760 CDS Human protein_coding chr12:125626687 chr12:125626689 stopgain 0.019 1 23 hm5C_associated_SNPs_60255 0 0 1 U2AF2 POSTAR2 ENCODE chr12:125626607-125626699
64251 chr8 126445584 126445584 1 + A T LUAD 126445580 + 126445560 126445600 41 TGTTTCCCATTAAACACTACCAGGACAAAATCAGGCCTTAC TGTTTCCCATTAAACACTACCAGGTCAAAATCAGGCCTTAC < 41bp 0.768491799787839 0.453933652515761 0.88282824 0.915787 prediction 0.536983599575679 Functional Loss - TRIB1 ENSG00000173334 CDS Human protein_coding chr8:126445580 chr8:126445584 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_60257 0 0 1 BUD13 POSTAR2 ENCODE chr8:126445514-126445591
64251 chr7 65617961 65617961 1 + A T rs144793361 65617957 + 65617937 65617977 41 AAATGTTAGGGACCAGATCACTGCAGTTGAAAACGGGCACT AAATGTTAGGGACCAGATCACTGCTGTTGAAAACGGGCACT < 41bp 0.816559291093496 0.548078961849989 0.23451307 0.0864729 prediction 0.536960658487015 Functional Loss - CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65617957 chr7:65617961 . . 0 25 hm5C_associated_SNPs_60260 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:65617912-65617970
64251 chr17 8166274 8166274 1 + G T LUAD 8166272 + 8166252 8166292 41 AAGGTTGGAGGTCCCGTCTACAGGATTGGAGTTGGAGGTGG AAGGTTGGAGGTCCCGTCTACATGATTGGAGTTGGAGGTGG < 41bp 0.873873079003733 0.605404160879659 0.3526298 0.123386085 prediction 0.536937836248147 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8166272 chr17:8166274 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_60262 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:8166251-8166300
64251 chr6 13615599 13615599 1 + G T CESC 13615597 + 13615577 13615617 41 GCGCTGCGTGGGCCATGGTGCAGCTCCGACCGCGAGCGTCT GCGCTGCGTGGGCCATGGTGCATCTCCGACCGCGAGCGTCT < 41bp 0.768460560523148 0.423752468799534 0.25386432 0.117139906 prediction 0.536921121046296 Functional Loss - NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615597 chr6:13615599 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_60263 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:13615560-13615620
64251 chr12 124236880 124236880 1 + G T LUSC 124236878 + 124236858 124236898 41 GTGAGGAAGAAGTTTCATTGCTGGGAAGCCAAGATATAGAA GTGAGGAAGAAGTTTCATTGCTTGGAAGCCAAGATATAGAA < 41bp 0.768451051011954 0.441287021376295 0.21059576 0.05935365 prediction 0.536902102023908 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124236878 chr12:124236880 synonymous SNV . 0 23 hm5C_associated_SNPs_60265 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124236867-124236897
64251 chr19 45412370 45412370 1 + G C STAD 45412369 + 45412349 45412389 41 CAGCAGATACGCCTGCAGGCCGAGGCCTTCCAGGCCCGCCT CAGCAGATACGCCTGCAGGCCCAGGCCTTCCAGGCCCGCCT < 41bp 0.768432230891747 0.465696324838689 0.85453594 0.2701131 prediction 0.536864461783494 Functional Loss - APOE ENSG00000130203 CDS Human protein_coding chr19:45412369 chr19:45412370 nonsynonymous SNV 0.731 1 22 hm5C_associated_SNPs_60269 0 0 10 DDX55 POSTAR2 ENCODE chr19:45412353-45412396
64251 chr7 77265139 77265139 1 + G T UCEC 77265137 + 77265117 77265157 41 AATGGAGTGAACTTCAAAGTCAGGAACGATCTGAACAAAAA AATGGAGTGAACTTCAAAGTCATGAACGATCTGAACAAAAA < 41bp 0.838438401896329 0.570041393575312 0.31982154 0.11399758 prediction 0.536794016642035 Functional Loss - PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77265137 chr7:77265139 nonsynonymous SNV 0.768 2 23 hm5C_associated_SNPs_60274 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:77265099-77265142
64251 chr3 193855564 193855564 1 + G C BLCA 193855563 + 193855543 193855583 41 ACCCGCTTCCTGTCCACGTGCGAGGGCGTTAATACCGAGGT ACCCGCTTCCTGTCCACGTGCCAGGGCGTTAATACCGAGGT < 41bp 0.839917624935893 0.571546916339292 0.9155406 0.19877243 prediction 0.536741417193202 Functional Loss - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855563 chr3:193855564 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_60277 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:193855538-193855567
64251 chr11 6503023 6503023 1 + G T BLCA 6503021 + 6503001 6503041 41 GTTGGTCTACAATCGGATGACAGAACTCTGCTTCCAGCGCT GTTGGTCTACAATCGGATGACATAACTCTGCTTCCAGCGCT < 41bp 0.868480884896552 0.60011603122846 0.42566052 0.33137345 prediction 0.536729707336183 Functional Loss - TIMM10B ENSG00000132286;ENSG00000265264 CDS Human other chr11:6503021 chr11:6503023 stopgain 1.000 1 23 hm5C_associated_SNPs_60279 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:6502999-6503044
64251 chr1 168274382 168274382 1 + C T SKCM 168274380 + 168274360 168274400 41 ACTATTCGGGTCTCCGAGGACACCGGCAGGCTCCCTACCCT ACTATTCGGGTCTCCGAGGACATCGGCAGGCTCCCTACCCT < 41bp 0.779400883928676 0.511044803881656 0.43145725 0.7655889 prediction 0.536712160094041 Functional Loss - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168274380 chr1:168274382 synonymous SNV . 0 23 hm5C_associated_SNPs_60280 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:168274348-168274386
64251 chr11 86048553 86048553 1 + C T BLCA 86048551 + 86048531 86048571 41 GTAGGTAATGCTGCTGTATCCTCAGTTGACTCATTCACTCA GTAGGTAATGCTGCTGTATCCTTAGTTGACTCATTCACTCA < 41bp 0.768355415812165 0.496881336104035 0.19723529 0.14253724 prediction 0.536710831624331 Functional Loss - HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86048551 chr11:86048553 nonsynonymous SNV 0.959 2 23 hm5C_associated_SNPs_60281 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:86048525-86048558
64251 chr3 179322609 179322609 1 + G C OV 179322608 + 179322588 179322628 41 CCTGCCCGTAGTAGCCATGGCGGCCATGAGTTTGTTGCGGC CCTGCCCGTAGTAGCCATGGCCGCCATGAGTTTGTTGCGGC < 41bp 0.795604732103193 0.527249950894952 0.36900038 0.26631418 prediction 0.536709562416483 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179322608 chr3:179322609 synonymous SNV . 0 22 hm5C_associated_SNPs_60283 0 0 8 DDX3X POSTAR2 ENCODE chr3:179322598-179322701
64251 chr2 97007481 97007481 1 + A C STAD 97007477 + 97007457 97007497 41 GTGTTCCCGATGCCCCTGCCCAGGAAGGCGCCTCTCAATAT GTGTTCCCGATGCCCCTGCCCAGGCAGGCGCCTCTCAATAT < 41bp 0.911007452304711 0.642665537519999 0.8909795 0.790182 prediction 0.536683829569423 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007477 chr2:97007481 nonsynonymous SNV 0.670 0 25 hm5C_associated_SNPs_60285 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:97007451-97007484
64251 chr2 95539278 95539278 1 - T A HNSC 95539282 - 95539262 95539302 41 TTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTG TTCAGCAGCTCCTGAATGTTCCGGTTGAGCTCGGCTTCCTG < 41bp 0.825653969675626 0.557313833910023 0.8600713 0.4103366 prediction 0.536680271531206 Functional Loss - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95539282 chr2:95539278 nonsynonymous SNV 0.303 4 25 hm5C_associated_SNPs_60286 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr2:95539264-95539282
64251 chr15 85326134 85326134 1 + G T UCEC 85326132 + 85326112 85326152 41 TTGTCAAGAACACCAGCCGCCAGGAGTCATTTGAAGCGGAG TTGTCAAGAACACCAGCCGCCATGAGTCATTTGAAGCGGAG < 41bp 0.768317053747835 0.425670048919544 0.48656404 0.20019469 prediction 0.53663410749567 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326132 chr15:85326134 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60289 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85326116-85326143
64251 chr20 25205950 25205950 1 + G T HNSC 25205948 + 25205928 25205968 41 GCTTTCCCAGGAGCAAAGTGCTGAAGGTAAGGGTGCCCTCA GCTTTCCCAGGAGCAAAGTGCTTAAGGTAAGGGTGCCCTCA < 41bp 0.768313774032848 0.464435727484782 0.25404608 0.1288307 prediction 0.536627548065697 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25205948 chr20:25205950 stopgain 0.855 0 23 hm5C_associated_SNPs_60290 0 0 2 GRWD1 POSTAR2 ENCODE chr20:25205928-25205951
64251 chr12 6640140 6640140 1 + C T UCEC 6640138 + 6640118 6640158 41 CTCAGACAATGACTTTGTCACACCAGAGCCCCGCCGTACTA CTCAGACAATGACTTTGTCACATCAGAGCCCCGCCGTACTA < 41bp 0.785829450312945 0.517520994617218 0.24239352 0.22135574 prediction 0.536616911391454 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6640138 chr12:6640140 nonsynonymous SNV 0.322 2 23 hm5C_associated_SNPs_60291 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:6640134-6640172
64251 chr19 18499566 18499566 1 + G C COAD 18499562 + 18499542 18499582 41 GGCGCGTGCCCGAGCCAGTTCCGGGCGGCAAACATGCACGC GGCGCGTGCCCGAGCCAGTTCCGGCCGGCAAACATGCACGC < 41bp 0.784759501138468 0.516456530590215 0.9184303 0.8861546 prediction 0.536605941096507 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499562 chr19:18499566 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_60293 0 0 8 FMR1 POSTAR2 ENCODE chr19:18499528-18499571
64251 chr2 178990865 178990865 1 + C T LUAD 178990863 + 178990843 178990883 41 TAAAGTTATGCTGGCAGATTCGCCAAGAGAAGAATCTAACA TAAAGTTATGCTGGCAGATTCGTCAAGAGAAGAATCTAACA < 41bp 0.796951118337257 0.52865083121274 0.5427232 0.077326834 prediction 0.536600574249034 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178990863 chr2:178990865 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60294 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:178990847-178990869
64251 chr19 2810340 2810340 1 + G T LUSC 2810338 + 2810318 2810358 41 TCAGCGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCG TCAGCGGGACCCACGTGGAGCGTGACTTTGTGGAGGCGCCG < 41bp 0.87480281944976 0.606527310749154 0.6119958 0.059560865 prediction 0.536551017401211 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810338 chr19:2810340 synonymous SNV . 0 23 hm5C_associated_SNPs_60298 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:2810314-2810343
64251 chr19 44622397 44622397 1 + G T LUSC 44622395 + 44622375 44622415 41 TCACTGAGGAAGAGCTGAGGCTGCTGGACCTTGCCCAGAGG TCACTGAGGAAGAGCTGAGGCTTCTGGACCTTGCCCAGAGG < 41bp 0.768267233703223 0.439706393535988 0.107388705 0.07107338 prediction 0.536534467406447 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44622395 chr19:44622397 synonymous SNV . 0 23 hm5C_associated_SNPs_60300 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:44622380-44622410
64251 chr2 10126358 10126358 1 + G T UCEC 10126356 + 10126336 10126376 41 ACCTATAGTTACAACAACCGCAGCAACAAGCCTGTGCACCG ACCTATAGTTACAACAACCGCATCAACAAGCCTGTGCACCG < 41bp 0.768248456202743 0.432986921568147 0.32884878 0.12544423 prediction 0.536496912405485 Functional Loss - GRHL1 ENSG00000134317 CDS Human protein_coding chr2:10126356 chr2:10126358 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60305 0 0 1 BUD13 POSTAR2 ENCODE chr2:10126350-10126419
64251 chr7 106509321 106509321 1 + C T LUSC 106509319 + 106509299 106509339 41 CCAGATCTACTGCGGTAAAGCTCCAGCACTGTCCAGCAAGG CCAGATCTACTGCGGTAAAGCTTCAGCACTGTCCAGCAAGG < 41bp 0.809776871044884 0.541533099010129 0.8631761 0.115513355 prediction 0.536487544069511 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509319 chr7:106509321 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_60306 0 0 1 FXR2 POSTAR2 ENCODE chr7:106509266-106509337
64251 chr12 110350842 110350842 1 + C T ESCA 110350840 + 110350820 110350860 41 AAAGAGAGAGGCAGAGTGGGCCCGAGAGCGCAGCGCACGGG AAAGAGAGAGGCAGAGTGGGCCTGAGAGCGCAGCGCACGGG < 41bp 0.77317892620082 0.504935799969274 0.15444821 0.107117355 prediction 0.536486252463093 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110350840 chr12:110350842 stopgain 0.945 0 23 hm5C_associated_SNPs_60308 0 0 2 UCHL5 POSTAR2 ENCODE chr12:110350792-110350887
64251 chrX 69639541 69639541 1 + G T UCEC 69639538 + 69639518 69639558 41 TGGGCACTGTTGAACGGACCCAGGATTCCGAAGGCTCCTTC TGGGCACTGTTGAACGGACCCAGTATTCCGAAGGCTCCTTC < 41bp 0.902588318742671 0.634345922963141 0.92328584 0.9249024 prediction 0.536484791559061 Functional Loss - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69639538 chrX:69639541 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_60309 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:69639528-69639546
64251 chr2 202141634 202141634 1 + G T BRCA 202141631 + 202141611 202141651 41 ATCACAATTTTGCAAAAGCACGGGAGAAAGTGCCCAAACTT ATCACAATTTTGCAAAAGCACGGTAGAAAGTGCCCAAACTT < 41bp 0.854570298173907 0.586331020369358 0.8741473 0.18086159 prediction 0.536478555609098 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141631 chr2:202141634 stopgain 0.001 0 24 hm5C_associated_SNPs_60312 0 0 2 GRWD1 POSTAR2 ENCODE chr2:202141606-202141704
64251 chrX 208264 208264 1 + C T LUAD 208262 + 208242 208282 41 AGGGGCTGAGCGAGGACCTGCACGAGTACCTGGTCGCCTGT AGGGGCTGAGCGAGGACCTGCATGAGTACCTGGTCGCCTGT < 41bp 0.784953090158934 0.516717349686245 0.8625503 0.5318031 prediction 0.536471480945377 Functional Loss - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:208262 chrX:208264 synonymous SNV . 0 23 hm5C_associated_SNPs_60313 0 0 7 DDX24 POSTAR2 ENCODE chrX:208239-208327
64251 chr11 82874804 82874804 1 + G T SARC 82874802 + 82874782 82874822 41 CTTTGAAGAAACTTTATGCCCTGGATGTCAGAGTCAATTCA CTTTGAAGAAACTTTATGCCCTTGATGTCAGAGTCAATTCA < 41bp 0.848450509618856 0.580229750887372 0.013187826 0.008996308 prediction 0.536441517462968 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82874802 chr11:82874804 synonymous SNV . 0 23 hm5C_associated_SNPs_60316 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:82874789-82874817
64251 chr5 140027504 140027504 1 + G C SKCM 140027503 + 140027483 140027523 41 ACGATAACAAAATGCCGGAGCGAGATAGTAAGGCTCAGGCC ACGATAACAAAATGCCGGAGCCAGATAGTAAGGCTCAGGCC < 41bp 0.81904156771462 0.550825472297632 0.54498 0.3635103 prediction 0.536432190833977 Functional Loss - IK ENSG00000113141 CDS Human protein_coding chr5:140027503 chr5:140027504 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_60317 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:140027432-140027504
64251 chr5 122154644 122154644 1 + G T UCEC 122154641 + 122154621 122154661 41 AGAAGATAGACCAGTTACATCAAGAACAAGCTTTTGCTGAC AGAAGATAGACCAGTTACATCAATAACAAGCTTTTGCTGAC < 41bp 0.768215913353687 0.399654694394479 0.24273583 0.07146934 prediction 0.536431826707374 Functional Loss - SNX2 ENSG00000205302 CDS Human protein_coding chr5:122154641 chr5:122154644 stopgain 1.000 1 24 hm5C_associated_SNPs_60318 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:122154608-122154644
64251 chr6 26225435 26225435 1 + G T STAD 26225432 + 26225412 26225452 41 ATCCACAGGCGGTAAAGCACCGCGCAAACAGCTGGCCACTA ATCCACAGGCGGTAAAGCACCGCTCAAACAGCTGGCCACTA < 41bp 0.768206854807112 0.393224772847078 0.35132474 0.17346522 prediction 0.536413709614223 Functional Loss - HIST1H3E ENSG00000196966 CDS Human other chr6:26225432 chr6:26225435 nonsynonymous SNV 0.883 0 24 hm5C_associated_SNPs_60320 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26225435-26225462
64251 chr3 52823866 52823866 1 + G T UCEC 52823863 + 52823843 52823883 41 GGGACCAAGCTGTGCTGCGGCAGGACGGGTAACCTGCCAGG GGGACCAAGCTGTGCTGCGGCAGTACGGGTAACCTGCCAGG < 41bp 0.901374520388114 0.633169920073805 0.7821345 0.4197101 prediction 0.536409200628617 Functional Loss - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52823863 chr3:52823866 nonsynonymous SNV 0.629 1 24 hm5C_associated_SNPs_60321 0 0 2 BUD13 POSTAR2 ENCODE chr3:52823851-52823926
64251 chr16 58296315 58296315 1 + C T BLCA 58296313 + 58296293 58296333 41 AAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAG AAGAGGTGAGTGAGGCCCTTCATGATGTTGATTTTCAGCAG < 41bp 0.804126213609432 0.535929715426438 0.4566411 0.48174894 prediction 0.536392996365986 Functional Loss - CCDC113 ENSG00000103021 CDS Human protein_coding chr16:58296313 chr16:58296315 synonymous SNV . 0 23 hm5C_associated_SNPs_60323 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:58296290-58296319
64251 chr1 35824621 35824621 1 + G T UCEC 35824619 + 35824599 35824639 41 TTATGGAATGCCGAATCAAACAGGATCTGAAAATTCATTGC TTATGGAATGCCGAATCAAACATGATCTGAAAATTCATTGC < 41bp 0.768191577464923 0.468791351376575 0.7832461 0.17598695 prediction 0.536383154929847 Functional Loss - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35824619 chr1:35824621 stopgain 1.000 0 23 hm5C_associated_SNPs_60325 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:35824599-35824646
64251 chr9 82333723 82333723 1 + G C LAML 82333722 + 82333702 82333742 41 TCATCGGACCTGGAATCCCCCGGCATGCTCGCCAGATCAAC TCATCGGACCTGGAATCCCCCCGCATGCTCGCCAGATCAAC < 41bp 0.844120088451927 0.575944159581109 0.2445836 0.02494514 prediction 0.536351857741636 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82333722 chr9:82333723 nonsynonymous SNV 0.529 4 22 hm5C_associated_SNPs_60326 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:82333702-82333726
64251 chr6 350830 350830 1 + G T LUSC 350828 + 350808 350848 41 TTCTTTCTTCACAGCCGCTCCGGGAATTCTGAAGTTCTGGG TTCTTTCTTCACAGCCGCTCCGTGAATTCTGAAGTTCTGGG < 41bp 0.778238295478477 0.510066204295147 0.2996706 0.070343554 prediction 0.536344182366659 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:350828 chr6:350830 stopgain 0.593 0 23 hm5C_associated_SNPs_60327 0 0 4 KHSRP POSTAR2 ENCODE chr6:350688-350847
64251 chr19 1395516 1395516 1 - C G rs534284825 1395517 - 1395497 1395537 41 GCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCGGCG GCAGGCTGGGGACAGGACGGCCACAGGCTCCGGCGGCGGCG < 41bp 0.768168179593409 0.473688485966673 0.42276627 0.31905204 prediction 0.536336359186817 Functional Loss - NDUFS7 ENSG00000248015 ncRNA_exonic Human antisense chr19:1395517 chr19:1395516 . . 0 22 hm5C_associated_SNPs_60329 0 0 1 XRN2 POSTAR2 ENCODE chr19:1395495-1395530
64251 chr16 67644990 67644990 1 + A T LUSC 67644986 + 67644966 67645006 41 AATGGAGGGCACAGTGGCTCCAGAAGCAGAGGCTGCTGTGG AATGGAGGGCACAGTGGCTCCAGATGCAGAGGCTGCTGTGG < 41bp 0.835908166043968 0.567752363958738 0.87333596 0.914273 prediction 0.53631160417046 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67644986 chr16:67644990 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_60334 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67644953-67645015
64251 chr19 18497154 18497154 1 + G T COAD 18497151 + 18497131 18497171 41 AGAGTTGCACTCCGAAGACTCCAGATTCCGAGAGTTGCGGA AGAGTTGCACTCCGAAGACTCCATATTCCGAGAGTTGCGGA < 41bp 0.768126884952789 0.387483475078388 0.4157674 0.37036175 prediction 0.536253769905579 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18497151 chr19:18497154 nonsynonymous SNV 0.000 3 24 hm5C_associated_SNPs_60342 0 0 2 PPIG POSTAR2 ENCODE chr19:18497111-18497217
64251 chr14 31139478 31139478 1 + G T LGG 31139476 + 31139456 31139496 41 TCCTAGGATTTCCATTTAAACAGGGTTAATTTGGAAGAATC TCCTAGGATTTCCATTTAAACATGGTTAATTTGGAAGAATC < 41bp 0.768112713790868 0.465538585788853 0.9214386 0.84664834 prediction 0.536225427581737 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31139476 chr14:31139478 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_60347 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:31139460-31139480
64251 chrX 67941446 67941446 1 + G T CESC 67941443 + 67941423 67941463 41 TGCTGCTCCCCGATGAGAACCGAGAGGTGCTACAGACCCTG TGCTGCTCCCCGATGAGAACCGATAGGTGCTACAGACCCTG < 41bp 0.768108633045684 0.369279419878872 0.8359455 0.11013457 prediction 0.536217266091367 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67941443 chrX:67941446 stopgain 1.000 1 24 hm5C_associated_SNPs_60348 0 0 1 YBX3 POSTAR2 ENCODE chrX:67941422-67941492
64251 chrX 67941447 67941447 1 + A T OV 67941443 + 67941423 67941463 41 TGCTGCTCCCCGATGAGAACCGAGAGGTGCTACAGACCCTG TGCTGCTCCCCGATGAGAACCGAGTGGTGCTACAGACCCTG < 41bp 0.768108633045684 0.446262514167957 0.8359455 0.30327892 prediction 0.536217266091367 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67941443 chrX:67941447 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_60349 0 0 1 YBX3 POSTAR2 ENCODE chrX:67941422-67941492
64251 chr11 44626732 44626732 1 + G T LUAD 44626730 + 44626710 44626750 41 AGGTCCGCTGCCTGCTGGGGCTGGTGAGTACGGATCCCTCC AGGTCCGCTGCCTGCTGGGGCTTGTGAGTACGGATCCCTCC < 41bp 0.768095580726626 0.416570215271596 0.36889255 0.121673256 prediction 0.536191161453252 Functional Loss - CD82 ENSG00000085117 CDS Human protein_coding chr11:44626730 chr11:44626732 synonymous SNV . 0 23 hm5C_associated_SNPs_60351 0 0 1 SND1 POSTAR2 ENCODE chr11:44626637-44626734
64251 chr7 73245694 73245694 1 + G C LIHC 73245690 + 73245670 73245710 41 TGGGAGGGCCTATGGATGAACTGCGTGGTGCAGAGCACCGG TGGGAGGGCCTATGGATGAACTGCCTGGTGCAGAGCACCGG < 41bp 0.784311963285918 0.516221242071195 0.28835118 0.29059458 prediction 0.536181442429447 Functional Loss - CLDN4 ENSG00000189143 CDS Human protein_coding chr7:73245690 chr7:73245694 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_60353 0 0 1 RPS3 POSTAR2 ENCODE chr7:73245649-73245703
64251 chr8 11640782 11640782 1 + C T SKCM 11640780 + 11640760 11640800 41 TCAGTTGTCTTGGAGCTCTTCCCCAGTGGTCACACCCACCT TCAGTTGTCTTGGAGCTCTTCCTCAGTGGTCACACCCACCT < 41bp 0.768082321944624 0.482319848920022 0.18093553 0.098998934 prediction 0.536164643889247 Functional Loss - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640780 chr8:11640782 nonsynonymous SNV 0.068 1 23 hm5C_associated_SNPs_60355 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:11640761-11640786
64251 chr17 65722740 65722740 1 + G T LUSC 65722737 + 65722717 65722757 41 ATCAGGATCACGTCGCAGTCCTAGGAAGTCCACTAGCAGCT ATCAGGATCACGTCGCAGTCCTATGAAGTCCACTAGCAGCT < 41bp 0.768079992883974 0.385880303395425 0.47067586 0.24878138 prediction 0.536159985767949 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65722737 chr17:65722740 stopgain 0.328 1 24 hm5C_associated_SNPs_60356 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr17:65722634-65722747
64251 chr5 53815321 53815321 1 + G T UCEC 53815319 + 53815299 53815339 41 TCTTCGCGGAGCAGCCCAGGCAGGACCTGGATCCCGTCATG TCTTCGCGGAGCAGCCCAGGCATGACCTGGATCCCGTCATG < 41bp 0.86902008031591 0.600940239176622 0.91254187 0.37407407 prediction 0.536159682278577 Functional Loss - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815319 chr5:53815321 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_60357 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:53815321-53815346
64251 chr17 45299788 45299788 1 + G T LUAD 45299785 + 45299765 45299805 41 TGAAGTGGAGCAGCTGTTAGCTGGGCAAGAGGATGCCAATG TGAAGTGGAGCAGCTGTTAGCTGTGCAAGAGGATGCCAATG < 41bp 0.909337234254246 0.641276644978299 0.8859254 0.24430153 prediction 0.536121178551893 Functional Loss - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45299785 chr17:45299788 nonsynonymous SNV 0.941 4 24 hm5C_associated_SNPs_60361 0 0 3 LIN28B POSTAR2 ENCODE chr17:45299774-45299822
64251 chr13 113803648 113803648 1 + G T PAAD 113803645 + 113803625 113803665 41 GGCCCGCACGTCACCCGCTTCAAGGACACCTACTTCGTGAC GGCCCGCACGTCACCCGCTTCAATGACACCTACTTCGTGAC < 41bp 0.768060249773521 0.373488728412902 0.4050655 0.10846913 prediction 0.536120499547042 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803645 chr13:113803648 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_60362 0 0 1 LIN28B POSTAR2 ENCODE chr13:113803584-113803649
64251 chr17 1946373 1946373 1 + A C UCEC 1946369 + 1946349 1946389 41 CACCCCAGCGTCAGGCCTACCTCAAGTTCTTGGACCAGTTT CACCCCAGCGTCAGGCCTACCTCACGTTCTTGGACCAGTTT < 41bp 0.768056955901607 0.380555578077527 0.4350162 0.124910325 prediction 0.536113911803215 Functional Loss - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946369 chr17:1946373 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_60363 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1946340-1946405
64251 chr6 26408132 26408132 1 + A T ACC 26408128 + 26408108 26408148 41 GGGGAGGGTGTATCCTGTACCATCAGAAGTTCCCTCCTCGG GGGGAGGGTGTATCCTGTACCATCTGAAGTTCCCTCCTCGG < 41bp 0.768034773375672 0.462746876013344 0.118057996 0.27540487 prediction 0.536069546751344 Functional Loss - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26408128 chr6:26408132 stopgain 0.013 0 25 hm5C_associated_SNPs_60368 0 0 1 ZNF622 POSTAR2 ENCODE chr6:26408084-26408157
64251 chr16 47621611 47621611 1 + C T SKCM 47621609 + 47621589 47621629 41 GGTCAGTTATATTTGTGGATCTCGATGCTCACAATCGCAAC GGTCAGTTATATTTGTGGATCTTGATGCTCACAATCGCAAC < 41bp 0.803105415832156 0.535083383140048 0.53174824 0.18231985 prediction 0.536044065384215 Functional Loss - PHKB ENSG00000102893 CDS Human protein_coding chr16:47621609 chr16:47621611 synonymous SNV . 0 23 hm5C_associated_SNPs_60369 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:47621593-47621620
64251 chr14 29237233 29237233 1 + G T LUSC 29237231 + 29237211 29237251 41 GCCGCGCCACTACGACGACCCGGGCAAGGGCAACTACTGGA GCCGCGCCACTACGACGACCCGTGCAAGGGCAACTACTGGA < 41bp 0.768000921014605 0.424194253003015 0.7332494 0.18767303 prediction 0.53600184202921 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237231 chr14:29237233 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60374 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:29237224-29237250
64251 chr7 44796084 44796084 1 + A T UCEC 44796080 + 44796060 44796100 41 ACAAAGCGCCACTCAGCCGGCTGGATCGCTGTCTGTGGTCA ACAAAGCGCCACTCAGCCGGCTGGTTCGCTGTCTGTGGTCA < 41bp 0.767981941075635 0.438014481895833 0.17904148 0.07212561 prediction 0.53596388215127 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44796080 chr7:44796084 synonymous SNV . 0 25 hm5C_associated_SNPs_60377 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:44796083-44796094
64251 chr11 102195697 102195697 1 + G T UCEC 102195694 + 102195674 102195714 41 CTGTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTGATG CTGTAAACTCCAGAGCAAATCAATATTTTTCTGCCTTGATG < 41bp 0.767969542829174 0.401534522606021 0.86561275 0.19105023 prediction 0.535939085658348 Functional Loss - BIRC3 ENSG00000023445 CDS Human protein_coding chr11:102195694 chr11:102195697 nonsynonymous SNV 0.012 4 24 hm5C_associated_SNPs_60378 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:102195680-102195720
64251 chr7 104747985 104747985 1 + C T UCEC 104747983 + 104747963 104748003 41 TGTCAGACCTTCAGCTAGGACTCGATGCAGTTGAGCCAACT TGTCAGACCTTCAGCTAGGACTTGATGCAGTTGAGCCAACT < 41bp 0.79793590533141 0.52999572970636 0.847818 0.3795982 prediction 0.535880351250101 Functional Loss - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104747983 chr7:104747985 synonymous SNV . 0 23 hm5C_associated_SNPs_60381 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:104747953-104747991
64251 chr1 65690488 65690488 1 + C T UCEC 65690486 + 65690466 65690506 41 TCCAGCAGGAGGATGATAAACCCGAAGCAGTTGCTGCCAGG TCCAGCAGGAGGATGATAAACCTGAAGCAGTTGCTGCCAGG < 41bp 0.767939783114868 0.48132553242764 0.23585606 0.20245123 prediction 0.535879566229736 Functional Loss - AK4 ENSG00000162433 CDS Human protein_coding chr1:65690486 chr1:65690488 synonymous SNV . 0 23 hm5C_associated_SNPs_60382 0 0 1 LIN28B POSTAR2 ENCODE chr1:65690434-65690488
64251 chr2 128180872 128180872 1 + G T rs5936 128180869 + 128180849 128180889 41 GAGGTGAGCTTCCTCAATTGCTCGCTGGACAACGGCGGCTG GAGGTGAGCTTCCTCAATTGCTCTCTGGACAACGGCGGCTG < 41bp 0.767933559796205 0.377188608210657 0.32301736 0.24469233 prediction 0.53586711959241 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128180869 chr2:128180872 synonymous SNV . 0 24 hm5C_associated_SNPs_60383 2 0 11 BUD13 POSTAR2 ENCODE chr2:128180819-128180894
64251 chr22 40803806 40803806 1 + A C KIRP 40803802 + 40803782 40803822 41 CTCCTGTGCAGATCGTGTCTCAGAAGGACGAGCACTGCTGG CTCCTGTGCAGATCGTGTCTCAGACGGACGAGCACTGCTGG < 41bp 0.767927683555244 0.374789473988321 0.90380347 0.85490924 prediction 0.535855367110488 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40803802 chr22:40803806 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_60384 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:40803775-40803821
64251 chr20 2840965 2840965 1 + G T BRCA 2840963 + 2840943 2840983 41 TGCAGGAAGATGGTGCTGTACTGGTTTATGGGCTTCATGGT TGCAGGAAGATGGTGCTGTACTTGTTTATGGGCTTCATGGT < 41bp 0.767879497598044 0.433381670114493 0.14232677 0.087656856 prediction 0.535758995196088 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840963 chr20:2840965 synonymous SNV . 0 23 hm5C_associated_SNPs_60389 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:2840951-2840999
64251 chr6 44114611 44114611 1 + C T rs142029936 44114609 + 44114589 44114629 41 CCTACCCCAACTGCACAGTTCTCGAAGCCCGCCCGTGTTAC CCTACCCCAACTGCACAGTTCTTGAAGCCCGCCCGTGTTAC < 41bp 0.81241601459487 0.544554624747181 0.94347405 0.36083162 prediction 0.535722779695378 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44114609 chr6:44114611 synonymous SNV . 0 23 hm5C_associated_SNPs_60392 0 0 3 BUD13 POSTAR2 ENCODE chr6:44114583-44114616
64251 chr12 58140029 58140029 1 + G C GBM 58140028 + 58140008 58140048 41 GCTCATGTCTGGCTATTAACCGAAGCAAACAGGTAAGACAG GCTCATGTCTGGCTATTAACCCAAGCAAACAGGTAAGACAG < 41bp 0.767856937528615 0.479955044769022 0.91691047 0.8749393 prediction 0.53571387505723 Functional Loss - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140028 chr12:58140029 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_60393 0 0 1 SND1 POSTAR2 ENCODE chr12:58139975-58140038
64251 chr6 116600631 116600631 1 - C A SKCM 116600633 - 116600613 116600653 41 TGATGGCAGCCGACCGCAGCCTGAAAAAGGGCGTTCAGGGT TGATGGCAGCCGACCGCAGCCTTAAAAAGGGCGTTCAGGGT < 41bp 0.856265138214511 0.588425388630828 0.011508137 0.0046591163 prediction 0.535679499167366 Functional Loss - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600633 chr6:116600631 synonymous SNV . 0 23 hm5C_associated_SNPs_60396 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr6:116600630-116600631
64251 chr2 96040934 96040934 1 + G T LUSC 96040932 + 96040912 96040952 41 TTCAACGCCTTTGATGCGGACGGGAACGGGGCCATCCACTT TTCAACGCCTTTGATGCGGACGTGAACGGGGCCATCCACTT < 41bp 0.767837120185668 0.42562922819843 0.5957212 0.25721198 prediction 0.535674240371336 Functional Loss - KCNIP3 ENSG00000115041 CDS Human protein_coding chr2:96040932 chr2:96040934 nonsynonymous SNV 0.919 1 23 hm5C_associated_SNPs_60398 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:96040927-96040954
64251 chr7 38259194 38259194 1 + G C ESCA 38259190 + 38259170 38259210 41 CCTGATAGTTCAGGATGCTTCAGAGAGGGCAGCACTTATAC CCTGATAGTTCAGGATGCTTCAGACAGGGCAGCACTTATAC < 41bp 0.789404431893982 0.521583973842774 0.7826898 0.14872584 prediction 0.535640916102416 Functional Loss - STARD3NL ENSG00000010270 CDS Human protein_coding chr7:38259190 chr7:38259194 nonsynonymous SNV 0.957 1 25 hm5C_associated_SNPs_60402 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:38259173-38259204
64251 chr3 45719645 45719645 1 + G T rs6441927 45719642 + 45719622 45719662 41 GGCATTATGTTTGAAGAAACCAGGATAAGGTACACTGCTTT GGCATTATGTTTGAAGAAACCAGTATAAGGTACACTGCTTT < 41bp 0.767818190089095 0.396422298877952 0.6623719 0.24342206 prediction 0.535636380178191 Functional Loss - LIMD1 ENSG00000144791 UTR3 Human protein_coding chr3:45719642 chr3:45719645 . . 0 24 hm5C_associated_SNPs_60403 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:45719580-45719646
64251 chr2 32396412 32396412 1 + G T UCEC 32396410 + 32396390 32396430 41 CCTTTTTTGGCAAGTTGTTACGGGAATTTAGACTTGTAGCA CCTTTTTTGGCAAGTTGTTACGTGAATTTAGACTTGTAGCA < 41bp 0.76779550417691 0.458758025314029 0.9030285 0.33623376 prediction 0.53559100835382 Functional Loss - SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32396410 chr2:32396412 synonymous SNV . 0 23 hm5C_associated_SNPs_60406 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32396396-32396429
64251 chr12 3149415 3149415 1 + C T SKCM 3149413 + 3149393 3149433 41 AACAGCGTGCTGGAGAACTTCACCATCCTGCAGGTGTGCGG AACAGCGTGCTGGAGAACTTCATCATCCTGCAGGTGTGCGG < 41bp 0.7782504395763 0.510466734587478 0.10541704 0.07866794 prediction 0.535567409977645 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3149413 chr12:3149415 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_60410 0 0 4 PPIG POSTAR2 ENCODE chr12:3149407-3149421
64251 chr3 9781517 9781517 1 + G T CESC 9781514 + 9781494 9781534 41 GAGGAGGATGAGGGTAAGGGCTGGAGCTCAGAGAAAGTCAA GAGGAGGATGAGGGTAAGGGCTGTAGCTCAGAGAAAGTCAA < 41bp 0.767766559185002 0.39249425389271 0.3949727 0.35289717 prediction 0.535533118370003 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9781514 chr3:9781517 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60413 0 0 2 UCHL5 POSTAR2 ENCODE chr3:9781509-9781571
64251 chr6 30297538 30297538 1 + G T UCEC 30297536 + 30297516 30297556 41 TGCCACTGGACGATGCTACACAGGAGTACAAGGTGGGGAAG TGCCACTGGACGATGCTACACATGAGTACAAGGTGGGGAAG < 41bp 0.831917476965029 0.564194728371531 0.6692823 0.03342545 prediction 0.535445497186996 Functional Loss - TRIM39;TRIM39-RPP21 ENSG00000204599;ENSG00000248167 CDS Human other chr6:30297536 chr6:30297538 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_60420 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:30297527-30297548
64251 chr1 150922974 150922974 1 + G T UCEC 150922972 + 150922952 150922992 41 AGCCTCTGCCCCAGCACCCTCAGCACTCCCGGCCCCTCCAG AGCCTCTGCCCCAGCACCCTCATCACTCCCGGCCCCTCCAG < 41bp 0.881067849574317 0.613350244875452 0.18219063 0.039938927 prediction 0.53543520939773 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150922972 chr1:150922974 nonsynonymous SNV 0.024 0 23 hm5C_associated_SNPs_60423 0 0 1 FXR2 POSTAR2 ENCODE chr1:150922960-150923013
64251 chr1 29639093 29639093 1 + C T UCEC 29639091 + 29639071 29639111 41 ACTCTGCCCGGCACGAGGTCCGCCAGTTCCACTTCACAGCG ACTCTGCCCGGCACGAGGTCCGTCAGTTCCACTTCACAGCG < 41bp 0.781770615694242 0.514053626620751 0.4481394 0.38933045 prediction 0.535433978146981 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29639091 chr1:29639093 synonymous SNV . 0 23 hm5C_associated_SNPs_60424 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29639085-29639118
64251 chr17 38450670 38450670 1 + G T CESC 38450667 + 38450647 38450687 41 AATTCTACCTAGGCTTCAAGCTAGAGAAAAATGTAAGCCAC AATTCTACCTAGGCTTCAAGCTATAGAAAAATGTAAGCCAC < 41bp 0.896261842518954 0.628549400650511 0.06957433 0.041579157 prediction 0.535424883736884 Functional Loss - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38450667 chr17:38450670 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60426 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38450620-38450675
64251 chr1 24077761 24077761 1 + C T UCEC 24077759 + 24077739 24077779 41 GCAATGCCTTTCAGGACAGACTCGGGGCCAGCCAAGAACGA GCAATGCCTTTCAGGACAGACTTGGGGCCAGCCAAGAACGA < 41bp 0.786616339836153 0.51890708371301 0.060076088 0.15848386 prediction 0.535418512246285 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077759 chr1:24077761 synonymous SNV . 0 23 hm5C_associated_SNPs_60428 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr1:24077739-24077771
64251 chr17 30521050 30521050 1 + G T UCEC 30521047 + 30521027 30521067 41 TTTTTATCCAGAGAGGGAGACACGAAACTACTTGGACTGTG TTTTTATCCAGAGAGGGAGACACTAAACTACTTGGACTGTG < 41bp 0.767707562670065 0.412029318632785 0.9159324 0.88258886 prediction 0.53541512534013 Functional Loss - RHOT1 ENSG00000126858 CDS Human protein_coding chr17:30521047 chr17:30521050 stopgain 1.000 1 24 hm5C_associated_SNPs_60429 0 0 5 WDR33 POSTAR2 GSE61123,GSM1496985 chr17:30521023-30521054
64251 chr3 10191496 10191496 1 + C T BLCA 10191494 + 10191474 10191514 41 ATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTA ATACTCTGAAAGAGCGATGCCTTCAGGTTGTCCGGAGCCTA < 41bp 0.76770378056026 0.477637644366348 0.9409847 0.13699988 prediction 0.53540756112052 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191494 chr3:10191496 synonymous SNV . 0 23 hm5C_associated_SNPs_60434 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr7 142997095 142997095 1 + C T UCEC 142997093 + 142997073 142997113 41 TCCTGCATCGTGGCACTCCTCTCGCATGGTGTGGAGGGCGC TCCTGCATCGTGGCACTCCTCTTGCATGGTGTGGAGGGCGC < 41bp 0.809854939209063 0.54218886404221 0.13376835 0.047670513 prediction 0.535332150333706 Functional Loss - CASP2 ENSG00000106144 CDS Human protein_coding chr7:142997093 chr7:142997095 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_60439 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:142997070-142997096
64251 chr1 228646151 228646151 1 + G T LUAD 228646149 + 228646129 228646169 41 GCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCC GCCTGCTGCTGCCCGGCGAGCTTGCCAAGCACGCCGTGTCC < 41bp 0.858042564983924 0.590386727352187 0.81385094 0.35056382 prediction 0.535311675263474 Functional Loss - HIST3H2BB ENSG00000196890 CDS Human protein_coding chr1:228646149 chr1:228646151 synonymous SNV . 0 23 hm5C_associated_SNPs_60440 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228646118-228646152
64251 chr4 30724196 30724196 1 + G T GBM 30724193 + 30724173 30724213 41 GAGGTGAACCAGCTGCGCTTCACGGTCATGGCCCGCGACCG GAGGTGAACCAGCTGCGCTTCACTGTCATGGCCCGCGACCG < 41bp 0.767645863948599 0.397140142959617 0.25679892 0.06620863 prediction 0.535291727897199 Functional Loss - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724193 chr4:30724196 synonymous SNV . 0 24 hm5C_associated_SNPs_60442 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30724169-30724196
64251 chrX 155169401 155169401 1 + C T HNSC 155169399 + 155169379 155169419 41 AACTACCAGCAGAAATCTTGCTCGAGCCATGTGTATGAAGA AACTACCAGCAGAAATCTTGCTTGAGCCATGTGTATGAAGA < 41bp 0.781495757232881 0.513875695641042 0.12630358 0.041962147 prediction 0.535240123183678 Functional Loss - VAMP7 ENSG00000124333 CDS Human protein_coding chrX:155169399 chrX:155169401 stopgain 0.986 0 23 hm5C_associated_SNPs_60448 0 0 1 NOP58 POSTAR2 GSE43666,GSM1067861 chrX:155169400-155169420
64251 chr5 133725924 133725924 1 + G T LGG 133725922 + 133725902 133725942 41 TTCTTTCCTCCTAGTCTCTGCTGGATGAACCGAATCCTAAC TTCTTTCCTCCTAGTCTCTGCTTGATGAACCGAATCCTAAC < 41bp 0.767598337206756 0.463757402542876 0.78663754 0.26697105 prediction 0.535196674413512 Functional Loss - UBE2B ENSG00000119048 CDS Human protein_coding chr5:133725922 chr5:133725924 stopgain 1.000 0 23 hm5C_associated_SNPs_60452 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:133725888-133725924
64251 chr5 133725925 133725925 1 + G T LIHC 133725922 + 133725902 133725942 41 TTCTTTCCTCCTAGTCTCTGCTGGATGAACCGAATCCTAAC TTCTTTCCTCCTAGTCTCTGCTGTATGAACCGAATCCTAAC < 41bp 0.767598337206756 0.404384352125372 0.78663754 0.29724476 prediction 0.535196674413512 Functional Loss - UBE2B ENSG00000119048 CDS Human protein_coding chr5:133725922 chr5:133725925 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60453 0 0 19 TARDBP POSTAR2 DRA001158,DRS012386 chr5:133725902-133725933
64251 chr3 143691481 143691481 1 + G C KICH 143691480 + 143691460 143691500 41 TACGGCGAGCCCCGCGAGGGCGGCCGCCGCCGAGTGGTGCT TACGGCGAGCCCCGCGAGGGCCGCCGCCGCCGAGTGGTGCT < 41bp 0.767573621248983 0.471615533436468 0.5020689 0.17268252 prediction 0.535147242497965 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691480 chr3:143691481 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_60455 0 0 2 SND1 POSTAR2 ENCODE chr3:143691469-143691547
64251 chr19 18054437 18054437 1 + G T SARC 18054435 + 18054415 18054455 41 ACCCCAACATGCGGCTGTCGCAGCTGAAACAGCTGCTCAAG ACCCCAACATGCGGCTGTCGCATCTGAAACAGCTGCTCAAG < 41bp 0.76755049759837 0.445969057654048 0.90237486 0.31171668 prediction 0.535100995196739 Functional Loss - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18054435 chr19:18054437 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_60459 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:18054413-18054440
64251 chr4 174216642 174216642 1 + C T BRCA 174216640 + 174216620 174216660 41 AAGGGAAGGTTTAATTCAAGCACGAAGTATTGGTGCTCAGA AAGGGAAGGTTTAATTCAAGCATGAAGTATTGGTGCTCAGA < 41bp 0.767530764067683 0.491402565037885 0.24719116 0.17773655 prediction 0.535061528135366 Functional Loss - GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174216640 chr4:174216642 stopgain 0.996 1 23 hm5C_associated_SNPs_60462 0 0 1 BUD13 POSTAR2 ENCODE chr4:174216591-174216723
64251 chr9 108399972 108399972 1 + G T rs116364105 108399970 + 108399950 108399990 41 GTTTAGTTTACCTGGCTTACCTGGGGAAGTTGACAACTTGT GTTTAGTTTACCTGGCTTACCTTGGGAAGTTGACAACTTGT < 41bp 0.767529000684464 0.470041066947351 0.838403 0.08360535 prediction 0.535058001368928 Functional Loss - FKTN ENSG00000106692 UTR3 Human protein_coding chr9:108399970 chr9:108399972 . . 0 23 hm5C_associated_SNPs_60463 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:108399953-108399975
64251 chr8 145745235 145745235 1 + G T UCEC 145745232 + 145745212 145745252 41 TTCAAGGTGGCCTTCATGGACAAGAAGACAGTGGTACTGCG TTCAAGGTGGCCTTCATGGACAATAAGACAGTGGTACTGCG < 41bp 0.767527445938644 0.381521717751718 0.12729406 0.09718236 prediction 0.535054891877287 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745232 chr8:145745235 nonsynonymous SNV 0.987 0 24 hm5C_associated_SNPs_60464 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:145745216-145745246
64251 chr2 106498387 106498387 1 + G T LUAD 106498385 + 106498365 106498405 41 AGCTACACCGGGCCCTCGTCCAGCGGGCGCTTCGCGGGCAG AGCTACACCGGGCCCTCGTCCATCGGGCGCTTCGCGGGCAG < 41bp 0.873983735764724 0.606476358940401 0.89699244 0.38669723 prediction 0.535014753648647 Functional Loss - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106498385 chr2:106498387 nonsynonymous SNV 0.990 0 23 hm5C_associated_SNPs_60468 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:106498366-106498391
64251 chr7 128865277 128865277 1 + G T UCEC 128865274 + 128865254 128865294 41 ACCGAGGCGCCGCGCACAGTCAAGAAGGTACTGGGGCCGGG ACCGAGGCGCCGCGCACAGTCAATAAGGTACTGGGGCCGGG < 41bp 0.887721033929846 0.62021977173666 0.51375586 0.13881606 prediction 0.535002524386371 Functional Loss - AHCYL2 ENSG00000158467 CDS Human protein_coding chr7:128865274 chr7:128865277 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_60469 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:128865277-128865278
64251 chr19 15791312 15791312 1 + A T LUAD 15791308 + 15791288 15791328 41 TCCTATATAACGATCTTCAACAAGAGTGCAAACATCATGCT TCCTATATAACGATCTTCAACAAGTGTGCAAACATCATGCT < 41bp 0.846169691298937 0.578673300403738 0.017198801 0.08281726 prediction 0.5349927817904 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15791308 chr19:15791312 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_60470 0 0 5 GRWD1 POSTAR2 ENCODE chr19:15791273-15791332
64251 chr18 8798174 8798174 1 + A T UCEC 8798170 + 8798150 8798190 41 ACCAGGCGGATGGCCCAGACCACGACAGTGACCGAGGCTGT ACCAGGCGGATGGCCCAGACCACGTCAGTGACCGAGGCTGT < 41bp 0.855213037311451 0.587718559748819 0.33088434 0.42771628 prediction 0.534988955125263 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8798170 chr18:8798174 nonsynonymous SNV 0.007 1 25 hm5C_associated_SNPs_60471 0 0 1 SUB1 POSTAR2 ENCODE chr18:8798094-8798174
64251 chr2 220402671 220402671 1 + G T rs11689281 220402669 + 220402649 220402689 41 CTGCAGAGTCCCTGCCCGAGCCGGGGCCGAGTGGAGGGTGG CTGCAGAGTCCCTGCCCGAGCCTGGGCCGAGTGGAGGGTGG < 41bp 0.767470896559454 0.413649499938635 0.89583373 0.5616106 prediction 0.534941793118909 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220402669 chr2:220402671 nonsynonymous SNV 0.631 0 23 hm5C_associated_SNPs_60473 0 0 7 BUD13 POSTAR2 ENCODE chr2:220402637-220402703
64251 chr1 144014034 144014034 1 + G T LUAD 144014032 + 144014012 144014052 41 AGATGGACTACTCCCGCAACCTGGAGAAGCTGGCAGAACGC AGATGGACTACTCCCGCAACCTTGAGAAGCTGGCAGAACGC < 41bp 0.844280165540132 0.576814915213613 0.8072372 0.303223 prediction 0.534930500653039 Functional Loss - FAM72C;NBPF20 ENSG00000196369 ncRNA_exonic Human protein_coding chr1:144014032 chr1:144014034 . . 0 23 hm5C_associated_SNPs_60474 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:144014014-144014041
64251 chr3 119526124 119526124 1 + G T LUAD 119526121 + 119526101 119526141 41 GAGGTGAGACCCAAAGAAAGCTGGAACCATGCTGACTTTGT GAGGTGAGACCCAAAGAAAGCTGTAACCATGCTGACTTTGT < 41bp 0.76746394156756 0.381106294418747 0.40409854 0.25903106 prediction 0.534927883135119 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119526121 chr3:119526124 nonsynonymous SNV 0.054 2 24 hm5C_associated_SNPs_60475 0 0 1 GRWD1 POSTAR2 ENCODE chr3:119526105-119526197
64251 chr8 99139910 99139910 1 + C T SKCM 99139908 + 99139888 99139928 41 GAAGTGAATGAGCAGTCTTCCTCCAAAGGGATGTTTAGAAA GAAGTGAATGAGCAGTCTTCCTTCAAAGGGATGTTTAGAAA < 41bp 0.829411950970022 0.561953616357747 0.9595642 0.18887287 prediction 0.53491666922455 Functional Loss - POP1 ENSG00000104356 CDS Human protein_coding chr8:99139908 chr8:99139910 nonsynonymous SNV 0.926 1 23 hm5C_associated_SNPs_60477 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:99139907-99139945
64251 chr15 90168674 90168674 1 + G C rs146807618 90168670 + 90168650 90168690 41 CGAGGTCGGTGCAGACCTTCCTGGGAGCCTGTCACTGCTTG CGAGGTCGGTGCAGACCTTCCTGGCAGCCTGTCACTGCTTG < 41bp 0.795168157778331 0.527709972973873 0.9036707 0.5181253 prediction 0.534916369608915 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90168670 chr15:90168674 synonymous SNV . 0 25 hm5C_associated_SNPs_60478 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr15:90168651-90168692
64251 chr5 74650486 74650486 1 + C T LGG 74650484 + 74650464 74650504 41 AGCTTTCAGAACCTTCTTCTCTCCAGTACCTACCTTACAGG AGCTTTCAGAACCTTCTTCTCTTCAGTACCTACCTTACAGG < 41bp 0.767435498350057 0.484043231337489 0.9581746 0.13633421 prediction 0.534870996700113 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74650484 chr5:74650486 synonymous SNV . 0 23 hm5C_associated_SNPs_60488 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:74650449-74650493
64251 chr1 19584361 19584361 1 + C T BLCA 19584359 + 19584339 19584379 41 ATACACAGAAATGGACTACGCCCGAGCTGGTAACAAAGCAG ATACACAGAAATGGACTACGCCTGAGCTGGTAACAAAGCAG < 41bp 0.767421591394773 0.498529106173682 0.017429024 0.005596429 prediction 0.534843182789546 Functional Loss - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19584359 chr1:19584361 stopgain 0.209 1 23 hm5C_associated_SNPs_60490 0 0 2 GPKOW POSTAR2 ENCODE chr1:19584313-19584368
64251 chr8 125463762 125463762 1 + G T LUAD 125463759 + 125463739 125463779 41 CTGCTGCTGGGTGACCATGGCTGGGTAGAGCATGTGGATAA CTGCTGCTGGGTGACCATGGCTGTGTAGAGCATGTGGATAA < 41bp 0.901189700904196 0.633768424608594 0.3659446 0.17807323 prediction 0.534842552591205 Functional Loss - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125463759 chr8:125463762 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_60491 0 0 1 EWSR1 POSTAR2 SRX029344 chr8:125463758-125463781
64251 chr19 44611486 44611486 1 + G T UCEC 44611484 + 44611464 44611504 41 CCTCGTGTCTTTTGAAACATCAGCGAGTCCACAGTGGAGAA CCTCGTGTCTTTTGAAACATCATCGAGTCCACAGTGGAGAA < 41bp 0.767419239868487 0.434697973946554 0.05954981 0.014567375 prediction 0.534838479736974 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611484 chr19:44611486 nonsynonymous SNV 0.411 0 23 hm5C_associated_SNPs_60492 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44611456-44611494
64251 chrX 129053189 129053189 1 + C T SKCM 129053187 + 129053167 129053207 41 AGCAGGAAATTTTCAACCTCCTCCATAAGAACAAGCAGCCA AGCAGGAAATTTTCAACCTCCTTCATAAGAACAAGCAGCCA < 41bp 0.767413843412806 0.469963723072419 0.95725644 0.08521113 prediction 0.534827686825611 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129053187 chrX:129053189 synonymous SNV . 0 23 hm5C_associated_SNPs_60494 0 0 5 EWSR1 POSTAR2 SRX029344 chrX:129053172-129053194
64251 chr6 26459792 26459792 1 + G C LUAD 26459791 + 26459771 26459811 41 TTACGCTGCCATCTGTCACCCGAGAAAAATGCTGAGGACAT TTACGCTGCCATCTGTCACCCCAGAAAAATGCTGAGGACAT < 41bp 0.841040261543868 0.573629143851775 0.8344355 0.35426292 prediction 0.534822235384186 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459791 chr6:26459792 nonsynonymous SNV 0.808 2 22 hm5C_associated_SNPs_60495 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26459767-26459796
64251 chrX 49093593 49093593 1 + A T LUAD 49093589 + 49093569 49093609 41 GTGCAGACCTTGCGCGCCTTCACCACTGAGCTGGTTGTAGA GTGCAGACCTTGCGCGCCTTCACCTCTGAGCTGGTTGTAGA < 41bp 0.868896307319647 0.601498591147762 0.11902526 0.18752137 prediction 0.53479543234377 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093589 chrX:49093593 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_60498 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:49093592-49093593
64251 chr16 30016612 30016612 1 + G T UCEC 30016609 + 30016589 30016629 41 CCCTGGCCGGGGTTCTGGGGCTGGGGTCGGGACAACCCTGA CCCTGGCCGGGGTTCTGGGGCTGTGGTCGGGACAACCCTGA < 41bp 0.87375562934492 0.606414171550689 0.9083338 0.8416113 prediction 0.534682915588461 Functional Loss - INO80E ENSG00000169592 CDS Human protein_coding chr16:30016609 chr16:30016612 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_60511 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30016583-30016616
64251 chr15 63363340 63363340 1 + A T LUAD 63363336 + 63363316 63363356 41 ACCTTAGTATGCATCAGATGCTGGATCAGACTTTACTGGAG ACCTTAGTATGCATCAGATGCTGGTTCAGACTTTACTGGAG < 41bp 0.817039454860504 0.549713341690598 0.2453753 0.12837178 prediction 0.534652226339813 Functional Loss - TPM1 ENSG00000140416 CDS Human protein_coding chr15:63363336 chr15:63363340 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_60512 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr15:63363339-63363365
64251 chr20 48568649 48568649 1 + G T LIHC 48568646 + 48568626 48568666 41 ATGAAGAGGACATGATGAATCAGGTGTTGCAGCGCTCCATC ATGAAGAGGACATGATGAATCAGTTGTTGCAGCGCTCCATC < 41bp 0.905049053766264 0.637731338278459 0.92162836 0.3276084 prediction 0.534635430975611 Functional Loss - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48568646 chr20:48568649 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_60514 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:48568611-48568661
64251 chr1 1455631 1455631 1 + G C STAD 1455627 + 1455607 1455647 41 CGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAA CGGGAGAATGCAGACATCATCCGCCAGCAGATCCGCCTGAA < 41bp 0.78121321846289 0.513900369478269 0.40916935 0.14811027 prediction 0.534625697969242 Functional Loss - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1455627 chr1:1455631 nonsynonymous SNV 0.322 4 25 hm5C_associated_SNPs_60516 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:1455620-1455640
64251 chr3 195955067 195955067 1 + G T HNSC 195955065 + 195955045 195955085 41 AGGAGGCAGTGCTGAGGACGCTGAGGGACACCCCGATGATG AGGAGGCAGTGCTGAGGACGCTTAGGGACACCCCGATGATG < 41bp 0.879450265856517 0.612150309071845 0.5275244 0.2530775 prediction 0.534599913569345 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955065 chr3:195955067 synonymous SNV . 0 23 hm5C_associated_SNPs_60519 0 0 1 PPIG POSTAR2 ENCODE chr3:195955048-195955166
64251 chr5 64859323 64859323 1 + G T UCEC 64859320 + 64859300 64859340 41 CCTGTGGAGGCAACACTGGCCAAGAAGAGGAAAGGTAGCTG CCTGTGGAGGCAACACTGGCCAATAAGAGGAAAGGTAGCTG < 41bp 0.890627007705508 0.623339032341403 0.09584841 0.14204302 prediction 0.534575950728211 Functional Loss - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64859320 chr5:64859323 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60520 0 0 10 GRWD1 POSTAR2 ENCODE chr5:64859296-64859343
64251 chr19 39423079 39423079 1 + G T UCEC 39423076 + 39423056 39423096 41 CCGCCTCGGAAGCTGGGCCCCACGGAAGGCCGGCCGCAGCT CCGCCTCGGAAGCTGGGCCCCACTGAAGGCCGGCCGCAGCT < 41bp 0.9029360226456 0.635649218206385 0.63843083 0.30467993 prediction 0.53457360887843 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423076 chr19:39423079 synonymous SNV . 0 24 hm5C_associated_SNPs_60521 0 0 1 RPS3 POSTAR2 ENCODE chr19:39423017-39423109
64251 chr17 37900352 37900352 1 + G C BLCA 37900348 + 37900328 37900368 41 CCTGAATGCTGGCAGCTTTCCTGAGATCCAGGGCTTTCTGC CCTGAATGCTGGCAGCTTTCCTGACATCCAGGGCTTTCTGC < 41bp 0.81869494200497 0.551418315319409 0.89311826 0.41337886 prediction 0.534553253371122 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37900348 chr17:37900352 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_60524 0 0 1 PPIG POSTAR2 ENCODE chr17:37900328-37900356
64251 chr5 176732934 176732934 1 + C T SKCM 176732932 + 176732912 176732952 41 ACAGTGGCTGGACTGAAATCCGCCGGGAAGCCTGGGTCTCC ACAGTGGCTGGACTGAAATCCGTCGGGAAGCCTGGGTCTCC < 41bp 0.775093417811913 0.507823634846704 0.54313874 0.42581674 prediction 0.534539565930418 Functional Loss - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176732932 chr5:176732934 synonymous SNV . 0 23 hm5C_associated_SNPs_60526 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:176732895-176732945
64251 chr17 52991168 52991168 1 + C T LUSC 52991166 + 52991146 52991186 41 GCGAAGTCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGC GCGAAGTCAAAGAAGTATACCTTGACCTGGTTAAGAAAGGC < 41bp 0.807357265460563 0.540103952635993 0.32240212 0.14735347 prediction 0.53450662564914 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52991166 chr17:52991168 synonymous SNV . 0 23 hm5C_associated_SNPs_60529 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr17:52991153-52991180
64251 chr7 75513130 75513130 1 + G T UCEC 75513127 + 75513107 75513147 41 ATCCGTGTTCAAGTACGTCTCAGGGTCTTCAGCCGAGAGGA ATCCGTGTTCAAGTACGTCTCAGTGTCTTCAGCCGAGAGGA < 41bp 0.915919627547295 0.648670348688571 0.9080535 0.17047334 prediction 0.534498557717446 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75513127 chr7:75513130 nonsynonymous SNV 0.598 3 24 hm5C_associated_SNPs_60532 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:75513096-75513132
64251 chr9 35845993 35845993 1 + G C LUSC 35845992 + 35845972 35846012 41 AGCTCCGTGCGCCAGGAAAACGTGACGGTGTTTGGATGCTT AGCTCCGTGCGCCAGGAAAACCTGACGGTGTTTGGATGCTT < 41bp 0.767239470626752 0.448924942888451 0.18178183 0.084703505 prediction 0.534478941253504 Functional Loss - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35845992 chr9:35845993 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_60535 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr9:35845973-35845993
64251 chr22 29176964 29176964 1 + G T BLCA 29176962 + 29176942 29176982 41 AGTAAGAAAGAAAAGGATAACTGAAGCAGAGCTCTGTGCTG AGTAAGAAAGAAAAGGATAACTTAAGCAGAGCTCTGTGCTG < 41bp 0.767230330467784 0.450059131819956 0.26153284 0.12541276 prediction 0.534460660935568 Functional Loss - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29176962 chr22:29176964 stopgain 0.999 0 23 hm5C_associated_SNPs_60538 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:29176948-29177047
64251 chr10 85899347 85899347 1 + G T rs1136944 85899345 + 85899325 85899365 41 GAGGCGAAGGTGACCGGGGACCGAGGTACTGCTCCGGCTGG GAGGCGAAGGTGACCGGGGACCTAGGTACTGCTCCGGCTGG < 41bp 0.772455468200231 0.505288467166772 0.8492119 0.687639 prediction 0.534334002066917 Functional Loss - GHITM ENSG00000271933 ncRNA_exonic Human antisense chr10:85899345 chr10:85899347 . . 0 23 hm5C_associated_SNPs_60550 0 0 5 DDX3X POSTAR2 ENCODE chr10:85899328-85899350
64251 chr15 90814553 90814553 1 + G T LUSC 90814550 + 90814530 90814570 41 CATTGGAGCAGAAGCTGAAGCAGGATCAAAAAGTCCTTAAG CATTGGAGCAGAAGCTGAAGCAGTATCAAAAAGTCCTTAAG < 41bp 0.904315054095973 0.637160795405576 0.7592176 0.17316443 prediction 0.534308517380792 Functional Loss - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814550 chr15:90814553 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_60553 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90814424-90814554
64251 chr17 57290747 57290747 1 + C T COAD 57290745 + 57290725 57290765 41 GGGCTTTGAATATGAAGACTCTCGAGGTCGGAGATTCATGT GGGCTTTGAATATGAAGACTCTTGAGGTCGGAGATTCATGT < 41bp 0.809980294493235 0.542828287160894 0.18650219 0.060126364 prediction 0.534304014664683 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290745 chr17:57290747 stopgain 0.999 1 23 hm5C_associated_SNPs_60554 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr17:57290697-57290751
64251 chr10 104679335 104679335 1 + G T UCEC 104679333 + 104679313 104679353 41 TGCCCCAGGCCATCTGCTCCCGGCATGGCCTGGCTGTGGGG TGCCCCAGGCCATCTGCTCCCGTCATGGCCTGGCTGTGGGG < 41bp 0.871180301959519 0.604029546316917 0.3553941 0.0968737 prediction 0.534301511285203 Functional Loss - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679333 chr10:104679335 synonymous SNV . 0 23 hm5C_associated_SNPs_60555 0 0 1 RBM15 POSTAR2 ENCODE chr10:104679298-104679353
64251 chr16 2511793 2511793 1 + G T UCEC 2511791 + 2511771 2511811 41 CATTCAGGAAAGCAGCTTCCCAGAACTCGAGGTGAGGCTGA CATTCAGGAAAGCAGCTTCCCATAACTCGAGGTGAGGCTGA < 41bp 0.767106435571396 0.464513788348644 0.19559726 0.04759884 prediction 0.534212871142793 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2511791 chr16:2511793 nonsynonymous SNV 0.023 2 23 hm5C_associated_SNPs_60564 0 0 2 PRPF8 POSTAR2 ENCODE chr16:2511776-2511859
64251 chr2 15753381 15753381 1 + G T LUAD 15753379 + 15753359 15753399 41 TAATTGGAGGTGTTGCAGCCCGGGATCAGCTCTCTGTTTTG TAATTGGAGGTGTTGCAGCCCGTGATCAGCTCTCTGTTTTG < 41bp 0.856894985298721 0.589806449948135 0.88954395 0.32965797 prediction 0.534177070701171 Functional Loss - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15753379 chr2:15753381 synonymous SNV . 0 23 hm5C_associated_SNPs_60567 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr2:15753360-15753397
64251 chr11 93913381 93913381 1 + G T UCEC 93913379 + 93913359 93913399 41 TGGCAAAACTCCCATGTCTGCAGAGATGAGAGAGGAGCAGG TGGCAAAACTCCCATGTCTGCATAGATGAGAGAGGAGCAGG < 41bp 0.767065726793334 0.42419104380447 0.79819596 0.38428134 prediction 0.534131453586668 Functional Loss - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93913379 chr11:93913381 stopgain 0.001 0 23 hm5C_associated_SNPs_60574 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:93913361-93913383
64251 chr6 24780944 24780944 1 + A C rs2307300 24780940 + 24780920 24780960 41 GATGATTCAGCCTTCTGCATCTGGATCTCTTGTTGGAAGAG GATGATTCAGCCTTCTGCATCTGGCTCTCTTGTTGGAAGAG < 41bp 0.767061457194671 0.353608143157125 0.50623864 0.39207214 prediction 0.534122914389342 Functional Loss - GMNN ENSG00000112312 CDS Human protein_coding chr6:24780940 chr6:24780944 synonymous SNV . 0 25 hm5C_associated_SNPs_60575 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:24780777-24780975
64251 chr8 145151057 145151057 1 + G T COAD 145151055 + 145151035 145151075 41 GGGGTTTCCAGGTATATAAGCAGGTGTGCGCCTCCTGCCAC GGGGTTTCCAGGTATATAAGCATGTGTGCGCCTCCTGCCAC < 41bp 0.883533295886212 0.61650193451726 0.91803837 0.5454223 prediction 0.534062722737903 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151055 chr8:145151057 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60578 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr8:145151040-145151060
64251 chr19 4491785 4491785 1 + G T SARC 4491783 + 4491763 4491803 41 CTTCACACCTGAGAAGAAAGCAGCGGTCCGGGCGCCACGGA CTTCACACCTGAGAAGAAAGCATCGGTCCGGGCGCCACGGA < 41bp 0.885349541163857 0.618322918101618 0.882709 0.24422166 prediction 0.534053246124478 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4491783 chr19:4491785 nonsynonymous SNV 0.426 0 23 hm5C_associated_SNPs_60579 0 0 9 EFTUD2 POSTAR2 ENCODE chr19:4491775-4491845
64251 chr11 812594 812594 1 + G T STAD 812592 + 812572 812612 41 TGTAGCCGTCTCTGCTGCCCCAGGCTCTGCAGCCCCTGCTG TGTAGCCGTCTCTGCTGCCCCATGCTCTGCAGCCCCTGCTG < 41bp 0.874502202364365 0.607476629584627 0.87630314 0.31045067 prediction 0.534051145559477 Functional Loss - RPLP2 ENSG00000177600 CDS Human protein_coding chr11:812592 chr11:812594 nonsynonymous SNV 0.267 3 23 hm5C_associated_SNPs_60580 0 0 34 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:812520-812600
64251 chr19 9271897 9271897 1 + G C LUSC 9271893 + 9271873 9271913 41 AAGACGCACATGCGAAGCCACACGGGGGAGAAACCGTACGA AAGACGCACATGCGAAGCCACACGCGGGAGAAACCGTACGA < 41bp 0.790912576805226 0.523894055825424 0.50691104 0.009677708 prediction 0.534037041959605 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271893 chr19:9271897 nonsynonymous SNV 0.791 4 25 hm5C_associated_SNPs_60582 0 0 1 UCHL5 POSTAR2 ENCODE chr19:9271833-9271906
64251 chr1 32557320 32557320 1 + G C LUAD 32557316 + 32557296 32557336 41 TCCTGCAGCTGAATTGCGACCTCCGCAAGACAAGCCTCTTC TCCTGCAGCTGAATTGCGACCTCCCCAAGACAAGCCTCTTC < 41bp 0.794015548521046 0.526997246666081 0.08774927 0.0386512 prediction 0.53403660370993 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32557316 chr1:32557320 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_60583 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:32557289-32557322
64251 chr12 120878267 120878267 1 + G T LIHC 120878265 + 120878245 120878285 41 TTCACTCCACAGCCGTTTCCCTGGGGAGATGGTAACCATAC TTCACTCCACAGCCGTTTCCCTTGGGAGATGGTAACCATAC < 41bp 0.856262908805862 0.589246149630073 0.39999336 0.015047938 prediction 0.534033518351579 Functional Loss - COX6A1 ENSG00000111775 CDS Human protein_coding chr12:120878265 chr12:120878267 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_60584 0 0 4 GRWD1 POSTAR2 ENCODE chr12:120878255-120878422
64251 chr19 50001265 50001265 1 + C T COAD 50001263 + 50001243 50001283 41 AGTACAACCGCTTCGAGAAGCGCCACAAGAACATGTCTGTA AGTACAACCGCTTCGAGAAGCGTCACAAGAACATGTCTGTA < 41bp 0.78704354180251 0.52003903356945 0.24124739 0.2623429 prediction 0.534009016466121 Functional Loss - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50001263 chr19:50001265 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_60587 0 0 40 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50001160-50001280
64251 chr1 212458946 212458946 1 + G T rs111653872 212458944 + 212458924 212458964 41 CCGGCGTTGACCGGGAAGAGCGGGCACCGCGGCAGTGGCTC CCGGCGTTGACCGGGAAGAGCGTGCACCGCGGCAGTGGCTC < 41bp 0.850841406082786 0.583840504499073 0.895411 0.5615196 prediction 0.534001803167425 Functional Loss - PPP2R5A ENSG00000066027 UTR5 Human protein_coding chr1:212458944 chr1:212458946 . . 0 23 hm5C_associated_SNPs_60588 0 0 5 DDX24 POSTAR2 ENCODE chr1:212458890-212459004
64251 chr1 168262507 168262507 1 + G T GBM 168262505 + 168262485 168262525 41 TCATAGCCGTGACTGCCTATCAGAATGAGGAGGTAAGAGTG TCATAGCCGTGACTGCCTATCATAATGAGGAGGTAAGAGTG < 41bp 0.766980300384953 0.431569216023944 0.90830773 0.317644 prediction 0.533960600769906 Functional Loss - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168262505 chr1:168262507 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_60593 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039851-ERR039852 chr1:168262498-168262519
64251 chr19 52448633 52448633 1 + C T LUSC 52448631 + 52448611 52448651 41 CTTTCAGAGATAAATCATGTCTCAACAGACATCGGAGAACT CTTTCAGAGATAAATCATGTCTTAACAGACATCGGAGAACT < 41bp 0.773230723255302 0.506251282669539 0.21875751 0.069980085 prediction 0.533958881171527 Functional Loss - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52448631 chr19:52448633 synonymous SNV . 0 23 hm5C_associated_SNPs_60594 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:52448625-52448661
64251 chr20 37621023 37621023 1 + C T LIHC 37621021 + 37621001 37621041 41 TCATCATGCTGGATGAAGCCCACGAGAGGACCTTGTACACT TCATCATGCTGGATGAAGCCCATGAGAGGACCTTGTACACT < 41bp 0.785723562142018 0.518748277900499 0.12646759 0.16092798 prediction 0.533950568483037 Functional Loss - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37621021 chr20:37621023 synonymous SNV . 0 23 hm5C_associated_SNPs_60596 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:37621022-37621037
64251 chr3 58067448 58067448 1 + G C GBM 58067447 + 58067427 58067467 41 CCCCAAAGCCAAGCTCAAGCCGGGGGCTCCTCTCAAACCCA CCCCAAAGCCAAGCTCAAGCCCGGGGCTCCTCTCAAACCCA < 41bp 0.766972751986701 0.476173081140852 0.88329387 0.82982457 prediction 0.533945503973403 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58067447 chr3:58067448 synonymous SNV . 0 22 hm5C_associated_SNPs_60598 0 0 1 BUD13 POSTAR2 ENCODE chr3:58067412-58067467
64251 chr15 40944268 40944268 1 + C T KICH 40944266 + 40944246 40944286 41 GTATTCACCTTTGTTTATGACACGATACAACTCACCATCAC GTATTCACCTTTGTTTATGACATGATACAACTCACCATCAC < 41bp 0.774362999028179 0.507391909707739 0.136183 0.17414525 prediction 0.53394217864088 Functional Loss - KNL1 ENSG00000137812 CDS Human protein_coding chr15:40944266 chr15:40944268 nonsynonymous SNV 0.808 4 23 hm5C_associated_SNPs_60599 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr15:40944260-40944280
64251 chr16 2282245 2282245 1 + G T LUSC 2282242 + 2282222 2282262 41 GACGGTGAGATGGCCGAGGCCCCGGGCAGCCCCCGCCAGCA GACGGTGAGATGGCCGAGGCCCCTGGCAGCCCCCGCCAGCA < 41bp 0.766949462736452 0.374430222857246 0.6824349 0.38109022 prediction 0.533898925472903 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2282242 chr16:2282245 synonymous SNV . 0 24 hm5C_associated_SNPs_60601 0 0 6 BUD13 POSTAR2 ENCODE chr16:2282193-2282261
64251 chr11 65108998 65108998 1 + G T STAD 65108995 + 65108975 65109015 41 CCCGAGTTGATGATGACAGCCTGGGCGAGTTTCCTGTGACC CCCGAGTTGATGATGACAGCCTGTGCGAGTTTCCTGTGACC < 41bp 0.766938969413774 0.365586238846138 0.7505287 0.09993404 prediction 0.533877938827549 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65108995 chr11:65108998 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60602 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr11:65108990-65109007
64251 chr2 172563838 172563838 1 + C T SKCM 172563836 + 172563816 172563856 41 ATCCTCCAAATCTGTGAGCACTCCAAGTGAAGCTGGAAGCC ATCCTCCAAATCTGTGAGCACTTCAAGTGAAGCTGGAAGCC < 41bp 0.812100254400324 0.54518041435243 0.9486879 0.4542629 prediction 0.533839680095789 Functional Loss - DYNC1I2 ENSG00000077380 CDS Human protein_coding chr2:172563836 chr2:172563838 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_60606 0 0 2 PRPF8 POSTAR2 ENCODE chr2:172563825-172563917
64251 chrX 102842220 102842220 1 + G T UCEC 102842217 + 102842197 102842237 41 CAGGGGTGGCTGCAGGGCCCCACGAAGGGACATTGAAGACA CAGGGGTGGCTGCAGGGCCCCACTAAGGGACATTGAAGACA < 41bp 0.900208105941757 0.633289108387184 0.023739547 0.02275154 prediction 0.533837995109145 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102842217 chrX:102842220 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_60607 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chrX:102842171-102842228
64251 chr19 44661691 44661691 1 + G T UCEC 44661689 + 44661669 44661709 41 AATTCATTGTAGGATCCACACAGGGGAGAAACCATATAATT AATTCATTGTAGGATCCACACATGGGAGAAACCATATAATT < 41bp 0.766908896303392 0.425252580154549 0.4118223 0.03053996 prediction 0.533817792606785 Functional Loss - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661689 chr19:44661691 nonsynonymous SNV 0.949 3 23 hm5C_associated_SNPs_60610 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44661666-44661692
64251 chr9 131105460 131105460 1 + G T LUAD 131105457 + 131105437 131105477 41 GGGTGCTGCTGTTCTCCAAGCTGGTGCTGAAACTGCCCTGG GGGTGCTGCTGTTCTCCAAGCTGTTGCTGAAACTGCCCTGG < 41bp 0.766900832947265 0.366515933971102 0.60129195 0.32194227 prediction 0.53380166589453 Functional Loss - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131105457 chr9:131105460 nonsynonymous SNV 0.883 0 24 hm5C_associated_SNPs_60613 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:131105433-131105460
64251 chr1 113232098 113232098 1 + C T UCEC 113232096 + 113232076 113232116 41 AGTCCAGGGGCCCCATGAAGCCCGAGATGGGCAGCTCCTTA AGTCCAGGGGCCCCATGAAGCCTGAGATGGGCAGCTCCTTA < 41bp 0.771559720152164 0.504685331641736 0.1520305 0.07696062 prediction 0.533748777020856 Functional Loss - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113232096 chr1:113232098 stopgain 1.000 0 23 hm5C_associated_SNPs_60617 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:113232090-113232130
64251 chr3 32409463 32409463 1 + A C UCEC 32409459 + 32409439 32409479 41 GAGAGGGACAGTCACAACTTCAACAGCTGGGCGGCCTCATC GAGAGGGACAGTCACAACTTCAACCGCTGGGCGGCCTCATC < 41bp 0.766871874778851 0.356217437705412 0.17123708 0.19341359 prediction 0.533743749557703 Functional Loss - CMTM8 ENSG00000170293 CDS Human protein_coding chr3:32409459 chr3:32409463 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_60618 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:32409447-32409474
64251 chr6 43042368 43042368 1 + G T KIRP 43042366 + 43042346 43042386 41 GTTGTCTGTTTCAGGTCTCCCGGGGCCTCAGTGCCAGCACC GTTGTCTGTTTCAGGTCTCCCGTGGCCTCAGTGCCAGCACC < 41bp 0.873884614219697 0.607024520212122 0.92593396 0.85946596 prediction 0.533720188015149 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43042366 chr6:43042368 synonymous SNV . 0 23 hm5C_associated_SNPs_60621 0 0 4 BUD13 POSTAR2 ENCODE chr6:43042357-43042376
64251 chr17 77709420 77709420 1 + G T LUAD 77709417 + 77709397 77709437 41 TTCCACTACGCCAACAACCCCAGGGTCACACCCCTGCTGAT TTCCACTACGCCAACAACCCCAGTGTCACACCCCTGCTGAT < 41bp 0.766858322882355 0.366519308709089 0.94508266 0.6906401 prediction 0.53371664576471 Functional Loss - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77709417 chr17:77709420 nonsynonymous SNV 0.897 4 24 hm5C_associated_SNPs_60623 0 0 1 GRWD1 POSTAR2 ENCODE chr17:77709359-77709446
64251 chr5 52780903 52780903 1 + G T LUAD 52780901 + 52780881 52780921 41 ATTTCAAGGTTGGGAGAGGCCGGTGTTCCCTCTGTGATGAG ATTTCAAGGTTGGGAGAGGCCGTTGTTCCCTCTGTGATGAG < 41bp 0.766849623701708 0.44713728136543 0.56150347 0.20904636 prediction 0.533699247403415 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52780901 chr5:52780903 synonymous SNV . 0 23 hm5C_associated_SNPs_60624 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr5:52780885-52780906
64251 chr6 150464574 150464574 1 + G T THCA 150464572 + 150464552 150464592 41 AATACGATCGTAAGGAGCTTCGGAAGCGGCTGGTGCTGGAG AATACGATCGTAAGGAGCTTCGTAAGCGGCTGGTGCTGGAG < 41bp 0.866376764876188 0.599532854152593 0.2997035 0.07749003 prediction 0.533687821447191 Functional Loss - PPP1R14C ENSG00000198729 CDS Human protein_coding chr6:150464572 chr6:150464574 synonymous SNV . 0 23 hm5C_associated_SNPs_60626 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:150464560-150464580
64251 chr16 2636802 2636802 1 + C T rs532663585 2636800 + 2636780 2636820 41 GCAACATAGAGCAGTACATTCACGATCTGGACTCGAACTCC GCAACATAGAGCAGTACATTCATGATCTGGACTCGAACTCC < 41bp 0.782951828805772 0.516109231775157 0.15880552 0.227687 prediction 0.533685194061231 Functional Loss - PDPK1 ENSG00000140992 CDS Human protein_coding chr16:2636800 chr16:2636802 synonymous SNV . 0 23 hm5C_associated_SNPs_60627 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2636780-2636829
64251 chr9 116038943 116038943 1 + G T UCEC 116038940 + 116038920 116038960 41 GCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACG GCGTCTGGCCAAAGGAGAGTCTGTGATTTTGGGGAAAGACG < 41bp 0.76683617719699 0.371181599063493 0.5871687 0.14396378 prediction 0.53367235439398 Functional Loss - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116038940 chr9:116038943 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_60629 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:116038908-116038963
64251 chr1 63282307 63282307 1 + A T COAD 63282303 + 63282283 63282323 41 AATAGAGGATCACGTAATTGCAGGAAATGTAGAAGAATTTC AATAGAGGATCACGTAATTGCAGGTAATGTAGAAGAATTTC < 41bp 0.836677790269452 0.569875667504453 0.6963786 0.5653693 prediction 0.533604245529997 Functional Loss - ATG4C ENSG00000125703 CDS Human protein_coding chr1:63282303 chr1:63282307 synonymous SNV . 0 25 hm5C_associated_SNPs_60631 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:63282246-63282319
64251 chr3 101573954 101573954 1 + G T BLCA 101573951 + 101573931 101573971 41 CCAATCAGCATCTCATTGTGCAGGATCTGGTGAACATCGGG CCAATCAGCATCTCATTGTGCAGTATCTGGTGAACATCGGG < 41bp 0.766787097618714 0.37539476992501 0.35711372 0.24346766 prediction 0.533574195237428 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101573951 chr3:101573954 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_60634 0 0 1 PPIG POSTAR2 ENCODE chr3:101573952-101574052
64251 chr17 36508790 36508790 1 + G T UCEC 36508787 + 36508767 36508807 41 CTCAGTCGCCTCTTTCGCACCAAGAGCTGCAACGGTGGCTC CTCAGTCGCCTCTTTCGCACCAATAGCTGCAACGGTGGCTC < 41bp 0.766786439066752 0.387809410286062 0.08777982 0.02665025 prediction 0.533572878133504 Functional Loss - SOCS7 ENSG00000174111 CDS Human other chr17:36508787 chr17:36508790 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_60635 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:36508783-36508809
64251 chr6 149700405 149700405 1 + C T BLCA 149700403 + 149700383 149700423 41 CAATAACTCTGCAACCTCTCCTCGAGTGGTAGTCACTCAGC CAATAACTCTGCAACCTCTCCTTGAGTGGTAGTCACTCAGC < 41bp 0.784804671452037 0.518022690659559 0.55939025 0.11406204 prediction 0.533563961584956 Functional Loss - TAB2 ENSG00000055208 CDS Human protein_coding chr6:149700403 chr6:149700405 stopgain 0.999 1 23 hm5C_associated_SNPs_60636 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:149700366-149700414
64251 chr1 6676846 6676846 1 + G T UCEC 6676843 + 6676823 6676863 41 TCCCCCAGTTGCAAGAGGCGCAGGACCGTGGAAGACTTCAA TCCCCCAGTTGCAAGAGGCGCAGTACCGTGGAAGACTTCAA < 41bp 0.766772464775558 0.374039400755486 0.80386513 0.34952563 prediction 0.533544929551117 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6676843 chr1:6676846 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_60640 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:6676823-6676850
64251 chr12 122372208 122372208 1 + C T GBM 122372206 + 122372186 122372226 41 AGTGAAGACAGGCGGTGGATCGCCACAGCAGACAAAGGGCC AGTGAAGACAGGCGGTGGATCGTCACAGCAGACAAAGGGCC < 41bp 0.794488094648474 0.527752685949582 0.3312058 0.1287956 prediction 0.533470817397784 Functional Loss - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122372206 chr12:122372208 nonsynonymous SNV 0.925 1 23 hm5C_associated_SNPs_60648 0 0 1 DDX3X POSTAR2 ENCODE chr12:122372002-122372255
64251 chr12 104336432 104336432 1 + C T COAD 104336430 + 104336410 104336450 41 CTTGGTGTGATTGAAGACCACTCGAATCGAACACGTCTTGC CTTGGTGTGATTGAAGACCACTTGAATCGAACACGTCTTGC < 41bp 0.810022852495064 0.543295723205324 0.51952726 0.10740641 prediction 0.533454258579479 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104336430 chr12:104336432 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_60649 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:104336396-104336438
64251 chr7 106508996 106508996 1 + G T PRAD 106508993 + 106508973 106509013 41 TGGCCACTGGTGGATGACTGCACGGGAGTCACCGGCTACCA TGGCCACTGGTGGATGACTGCACTGGAGTCACCGGCTACCA < 41bp 0.913066644891884 0.646342369128552 0.28506786 0.20973274 prediction 0.533448551526664 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508993 chr7:106508996 synonymous SNV . 0 24 hm5C_associated_SNPs_60653 0 0 1 FXR2 POSTAR2 ENCODE chr7:106508931-106508996
64251 chr13 113487266 113487266 1 + G C LUSC 113487262 + 113487242 113487282 41 CGTAGACGGCCCCAGGAAATCGCCGGACGGGGGGAAATCCT CGTAGACGGCCCCAGGAAATCGCCCGACGGGGGGAAATCCT < 41bp 0.766710915509067 0.483323518480795 0.81175363 0.10027498 prediction 0.533421831018135 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487262 chr13:113487266 synonymous SNV . 0 25 hm5C_associated_SNPs_60654 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr13:113487259-113487275
64251 chr4 83375965 83375965 1 + G T UCEC 83375963 + 83375943 83375983 41 CCTCAGGGAGTGTGGAGGCACAGAAACTGTTATTCGGGCAT CCTCAGGGAGTGTGGAGGCACATAAACTGTTATTCGGGCAT < 41bp 0.86217253325052 0.59548411969071 0.4228378 0.23977348 prediction 0.533376827119619 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83375963 chr4:83375965 nonsynonymous SNV 0.901 4 23 hm5C_associated_SNPs_60656 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:83375933-83375965
64251 chr20 39741563 39741563 1 + A T SKCM 39741559 + 39741539 39741579 41 GCTGTAGCCCTGTACTTCATCGACAAGGTGAGAGCATCTTC GCTGTAGCCCTGTACTTCATCGACTAGGTGAGAGCATCTTC < 41bp 0.766672366549801 0.437346594775001 0.14619645 0.04484743 prediction 0.533344733099602 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741559 chr20:39741563 stopgain 0.995 1 25 hm5C_associated_SNPs_60658 0 0 2 DGCR8 POSTAR2 ENCODE chr20:39741557-39741576
64251 chr5 126113098 126113098 1 + G C rs534624566 126113094 + 126113074 126113114 41 CGCCAGCGTCTGGACGTGAGCGCAGGTCGCCGGTTTGTGCC CGCCAGCGTCTGGACGTGAGCGCACGTCGCCGGTTTGTGCC < 41bp 0.766664318765457 0.492298707424415 0.8990437 0.73580325 prediction 0.533328637530915 Functional Loss - LMNB1 ENSG00000113368 UTR5 Human protein_coding chr5:126113094 chr5:126113098 . . 0 25 hm5C_associated_SNPs_60660 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr5:126112891-126113119
64251 chr6 4041049 4041049 1 + C T UCEC 4041047 + 4041027 4041067 41 ATCACGCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTA ATCACGCTTGCGAAGGCGGTCTTGATCACGCGGTGGTCGTA < 41bp 0.807661847473918 0.54099788348367 0.52617985 0.28774396 prediction 0.533327927980497 Functional Loss - PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4041047 chr6:4041049 stopgain 0.996 0 23 hm5C_associated_SNPs_60661 0 0 14 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:4041040-4041060
64251 chr1 230807386 230807386 1 + G T UCEC 230807384 + 230807364 230807404 41 GTCACAGGAGGTGCCATCTCCAGGTAATTTAAACAACCCTG GTCACAGGAGGTGCCATCTCCATGTAATTTAAACAACCCTG < 41bp 0.766662526517946 0.424727577987208 0.78084165 0.34584484 prediction 0.533325053035892 Functional Loss - COG2 ENSG00000135775 CDS Human protein_coding chr1:230807384 chr1:230807386 nonsynonymous SNV 0.127 4 23 hm5C_associated_SNPs_60662 0 0 2 PRPF8 POSTAR2 ENCODE chr1:230807348-230807430
64251 chr19 1207120 1207120 1 + G T LUAD 1207118 + 1207098 1207138 41 GGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGGAGGG GGTGAAGGAGGTGCTGGACTCGTAGACGCTGTGCAGGAGGG < 41bp 0.766660763372708 0.427126357605341 0.9195821 0.5794803 prediction 0.533321526745417 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207118 chr19:1207120 stopgain 0.820 1 23 hm5C_associated_SNPs_60664 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1207054-1207138
64251 chr5 7878394 7878394 1 + C T rs114053717 7878392 + 7878372 7878412 41 TCTGAATATTCCTGGTTTACCCCCAGAATATTTACAGGTAC TCTGAATATTCCTGGTTTACCCTCAGAATATTTACAGGTAC < 41bp 0.766623851076525 0.497416736462132 0.12942484 0.13040534 prediction 0.53324770215305 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7878392 chr5:7878394 nonsynonymous SNV 0.185 0 23 hm5C_associated_SNPs_60670 1 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:7878365-7878399
64251 chr13 20656935 20656935 1 + C T LGG 20656933 + 20656913 20656953 41 TATTTAAGGGTCAATATTCTCTCGAGTTGAAGAAGACTATC TATTTAAGGGTCAATATTCTCTTGAGTTGAAGAAGACTATC < 41bp 0.76661592275275 0.492500341358969 0.710739 0.21279484 prediction 0.5332318455055 Functional Loss - ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20656933 chr13:20656935 stopgain 1.000 1 23 hm5C_associated_SNPs_60671 0 0 3 BUD13 POSTAR2 ENCODE chr13:20656919-20656965
64251 chr7 127230165 127230165 1 + G T UCEC 127230162 + 127230142 127230182 41 GTAATGACCGGGAGCGGGTCCAAGAATCTGCTGATGAACTC GTAATGACCGGGAGCGGGTCCAATAATCTGCTGATGAACTC < 41bp 0.905332410717615 0.638724798591248 0.58238965 0.24834073 prediction 0.533215224252734 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127230162 chr7:127230165 stopgain 0.999 1 24 hm5C_associated_SNPs_60673 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:127230130-127230184
64251 chr12 62931931 62931931 1 + G T SARC 62931928 + 62931908 62931948 41 TAGTGGCGGTGCCTTGAAACCTGGGAGAGCTGTAGAAGGAC TAGTGGCGGTGCCTTGAAACCTGTGAGAGCTGTAGAAGGAC < 41bp 0.766588367372068 0.401964237865924 0.83799255 0.3967933 prediction 0.533176734744136 Functional Loss - MON2 ENSG00000061987 CDS Human protein_coding chr12:62931928 chr12:62931931 nonsynonymous SNV 0.978 1 24 hm5C_associated_SNPs_60676 0 0 9 BUD13 POSTAR2 ENCODE chr12:62931874-62931951
64251 chr7 99227358 99227358 1 + G T BLCA 99227355 + 99227335 99227375 41 AGGCAGCACCTGCAGGTGCACCGGAGGACGCACACCGGGGA AGGCAGCACCTGCAGGTGCACCGTAGGACGCACACCGGGGA < 41bp 0.766580988999901 0.381552308475378 0.89525706 0.3194911 prediction 0.533161977999802 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99227355 chr7:99227358 synonymous SNV . 0 24 hm5C_associated_SNPs_60677 0 0 1 SLTM POSTAR2 ENCODE chr7:99227335-99227386
64251 chr7 99227357 99227357 1 + G T BLCA 99227355 + 99227335 99227375 41 AGGCAGCACCTGCAGGTGCACCGGAGGACGCACACCGGGGA AGGCAGCACCTGCAGGTGCACCTGAGGACGCACACCGGGGA < 41bp 0.766580988999901 0.419862940469948 0.89525706 0.49741292 prediction 0.533161977999802 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99227355 chr7:99227357 nonsynonymous SNV 0.940 2 23 hm5C_associated_SNPs_60678 0 0 1 SLTM POSTAR2 ENCODE chr7:99227335-99227386
64251 chr11 107965624 107965624 1 + G T LIHC 107965622 + 107965602 107965642 41 TTGTCTCACTTCCTACTGAACTGGAGGACTTGATACCGGAA TTGTCTCACTTCCTACTGAACTTGAGGACTTGATACCGGAA < 41bp 0.766563384722202 0.445507976094402 0.16929936 0.027952582 prediction 0.533126769444405 Functional Loss - CUL5 ENSG00000166266 CDS Human protein_coding chr11:107965622 chr11:107965624 synonymous SNV . 0 23 hm5C_associated_SNPs_60682 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:107965602-107965643
64251 chr3 10167347 10167347 1 + G T UCEC 10167344 + 10167324 10167364 41 TCAAGACTTGCAACACTAAACGAGAAATTGACAGCCCTTGA TCAAGACTTGCAACACTAAACGATAAATTGACAGCCCTTGA < 41bp 0.880358517542651 0.613805289199012 0.42697594 0.118124455 prediction 0.533106456687278 Functional Loss - BRK1 ENSG00000254999 CDS Human protein_coding chr3:10167344 chr3:10167347 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_60683 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:10167270-10167402
64251 chr20 43058293 43058293 1 + G T UCEC 43058291 + 43058271 43058311 41 CCCAGCCGACCATCACCAAGCAGGAAGTTATCTAGCAAGCC CCCAGCCGACCATCACCAAGCATGAAGTTATCTAGCAAGCC < 41bp 0.766535171618577 0.439904407508103 0.44196957 0.18905315 prediction 0.533070343237153 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43058291 chr20:43058293 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_60684 0 0 1 IGF2BP3 POSTAR2 ENCODE chr20:43058237-43058294
64251 chr19 16952596 16952596 1 + C T COAD 16952594 + 16952574 16952614 41 GTCAGGAGAATTCGCACAACCACGGGGACGGTGCAGAGGAC GTCAGGAGAATTCGCACAACCATGGGGACGGTGCAGAGGAC < 41bp 0.766728356173943 0.500206778472046 0.6555408 0.5970486 prediction 0.533043155403794 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16952594 chr19:16952596 synonymous SNV . 0 23 hm5C_associated_SNPs_60689 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:16952562-16952601
64251 chr3 17051565 17051565 1 + G C BRCA 17051561 + 17051541 17051581 41 TCCGCAGATGTTGCAAACATCTGGGTTACAGGACTGCGGTA TCCGCAGATGTTGCAAACATCTGGCTTACAGGACTGCGGTA < 41bp 0.787987706169263 0.52146939399915 0.8864448 0.6013142 prediction 0.533036624340225 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17051561 chr3:17051565 nonsynonymous SNV 0.979 3 25 hm5C_associated_SNPs_60690 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:17051553-17051583
64251 chr5 140481851 140481851 1 + G T LUSC 140481849 + 140481829 140481869 41 CGCCACAGACCGTGGCTCCCCGGCTTTGAGCAGCGAGGCGC CGCCACAGACCGTGGCTCCCCGTCTTTGAGCAGCGAGGCGC < 41bp 0.873491236633041 0.606979420031534 0.3464178 0.0692395 prediction 0.533023633203014 Functional Loss - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481849 chr5:140481851 nonsynonymous SNV 0.029 1 23 hm5C_associated_SNPs_60692 0 0 1 FUS POSTAR2 GSE43308,GSM1060383 chr5:140481840-140481860
64251 chr9 86616312 86616312 1 + G T PRAD 86616310 + 86616290 86616330 41 AGCCTTCACGAATGTTGATGCTGCAGCTAACTGATGGAATC AGCCTTCACGAATGTTGATGCTTCAGCTAACTGATGGAATC < 41bp 0.766511028622109 0.457988842353824 0.16080475 0.07830933 prediction 0.533022057244218 Functional Loss - RMI1 ENSG00000178966 CDS Human protein_coding chr9:86616310 chr9:86616312 synonymous SNV . 0 23 hm5C_associated_SNPs_60693 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:86616296-86616317
64251 chr3 42244104 42244104 1 + G T LUAD 42244102 + 42244082 42244122 41 GCGGAGAAGGGCGAGCTGCGCAGCGGCTCCCTCACACCCAC GCGGAGAAGGGCGAGCTGCGCATCGGCTCCCTCACACCCAC < 41bp 0.875084058568941 0.608593623931683 0.7488448 0.13277385 prediction 0.532980869274516 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42244102 chr3:42244104 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_60695 0 0 2 METAP2 POSTAR2 ENCODE chr3:42244022-42244129
64251 chr20 42087030 42087030 1 + G T HNSC 42087028 + 42087008 42087048 41 TTCGTGGAGTTCGAGGACTCCCGCGACGCCGACGACGCCGT TTCGTGGAGTTCGAGGACTCCCTCGACGCCGACGACGCCGT < 41bp 0.766488517385385 0.426299151331369 0.19582376 0.114271134 prediction 0.53297703477077 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42087028 chr20:42087030 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_60696 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:42087014-42087091
64251 chr6 36652002 36652002 1 + A C SARC 36651998 + 36651978 36652018 41 TGTGATGCGCTAATGGCGGGCTGCATCCAGGAGGCCCGTGA TGTGATGCGCTAATGGCGGGCTGCCTCCAGGAGGCCCGTGA < 41bp 0.766485760946079 0.35199933612302 0.8132098 0.615508 prediction 0.532971521892158 Functional Loss - CDKN1A ENSG00000124762 CDS Human protein_coding chr6:36651998 chr6:36652002 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_60697 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:36652001-36652002
64251 chr16 14755867 14755867 1 + C T UCEC 14755865 + 14755845 14755885 41 ACCTTCCTACCTTTCATCCACACCATCTGCCCTCTGCAAGA ACCTTCCTACCTTTCATCCACATCATCTGCCCTCTGCAAGA < 41bp 0.766483794443006 0.480669485839134 0.010303587 0.025467157 prediction 0.532967588886011 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755865 chr16:14755867 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_60699 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:14755814-14755872
64251 chr19 58757774 58757774 1 + G T COAD 58757771 + 58757751 58757791 41 CGAGAGGTGACACTGGAGACCTGGGAGCATATTGTCTCCCT CGAGAGGTGACACTGGAGACCTGTGAGCATATTGTCTCCCT < 41bp 0.847502446721144 0.581034315057218 0.3295455 0.09118885 prediction 0.532936263327853 Functional Loss - ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58757771 chr19:58757774 nonsynonymous SNV 0.062 0 24 hm5C_associated_SNPs_60700 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58757677-58757776
64251 chr3 50145675 50145675 1 + A T UCEC 50145671 + 50145651 50145691 41 GGACTTTTCTTCAGTATTCACAGGATTATCAGCAGTTTTAT GGACTTTTCTTCAGTATTCACAGGTTTATCAGCAGTTTTAT < 41bp 0.766455214374313 0.464175236480563 0.41383323 0.5066863 prediction 0.532910428748625 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50145671 chr3:50145675 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_60701 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:50145646-50145710
64251 chr16 67070607 67070607 1 + G T OV 67070605 + 67070585 67070625 41 CGGCCAGCTGGCAGGGAGAACAGCGACAAACACCTAGCCGA CGGCCAGCTGGCAGGGAGAACATCGACAAACACCTAGCCGA < 41bp 0.766449067764565 0.420265568546839 0.83333504 0.34442353 prediction 0.532898135529129 Functional Loss - CBFB ENSG00000067955 CDS Human protein_coding chr16:67070605 chr16:67070607 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_60704 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:67070563-67070609
64251 chr3 52741778 52741778 1 + G C LUAD 52741777 + 52741757 52741797 41 GTTCAAGAATCAAGCACAGACGACAAGAAACCAGGGGAAAG GTTCAAGAATCAAGCACAGACCACAAGAAACCAGGGGAAAG < 41bp 0.808328901959945 0.541905464571055 0.3250445 0.19979915 prediction 0.532846874777779 Functional Loss - SPCS1 ENSG00000114902 CDS Human protein_coding chr3:52741777 chr3:52741778 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_60714 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:52741716-52741780
64251 chr11 34153038 34153038 1 + C T OV 34153036 + 34153016 34153056 41 CCTGGATTGCCTCAACATCACTCGGATAGTCTCAGGCTGCC CCTGGATTGCCTCAACATCACTTGGATAGTCTCAGGCTGCC < 41bp 0.76642218410488 0.496608291552493 0.3097099 0.4103406 prediction 0.532844368209759 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34153036 chr11:34153038 nonsynonymous SNV 0.800 2 23 hm5C_associated_SNPs_60716 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34152983-34153106
64251 chr5 115469851 115469851 1 + C T UCEC 115469849 + 115469829 115469869 41 CTCCTCAAGCTGTGTTACAACTCGGAGTGAACAATGAAGAT CTCCTCAAGCTGTGTTACAACTTGGAGTGAACAATGAAGAT < 41bp 0.766418493355936 0.490314348701461 0.051384896 0.06339517 prediction 0.532836986711871 Functional Loss - COMMD10 ENSG00000145781 CDS Human protein_coding chr5:115469849 chr5:115469851 synonymous SNV . 0 23 hm5C_associated_SNPs_60717 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:115469824-115469864
64251 chr18 33750155 33750155 1 + C T CESC 33750153 + 33750133 33750173 41 CTGCCCAGTGCTCCACCCTTCTCAACGGTCAGTCTCTGTGT CTGCCCAGTGCTCCACCCTTCTTAACGGTCAGTCTCTGTGT < 41bp 0.766416505358438 0.491438380495591 0.2788625 0.07292053 prediction 0.532833010716875 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33750153 chr18:33750155 stopgain 0.077 0 23 hm5C_associated_SNPs_60718 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:33750122-33750203
64251 chr20 44444364 44444364 1 + C T SKCM 44444362 + 44444342 44444382 41 GATGTCAGGACCATTCTGCTCTCCATCCAGAGCCTTCTAGG GATGTCAGGACCATTCTGCTCTTCATCCAGAGCCTTCTAGG < 41bp 0.801561923926461 0.535145740244708 0.94086236 0.047245234 prediction 0.532832367363506 Functional Loss - UBE2C ENSG00000175063 CDS Human protein_coding chr20:44444362 chr20:44444364 nonsynonymous SNV 0.973 4 23 hm5C_associated_SNPs_60719 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:44444298-44444379
64251 chr1 24077512 24077512 1 + C T rs34390860 24077510 + 24077490 24077530 41 AACATAGGAAACTCTCGGAGCTCGAGAGACCTCACAAAGTG AACATAGGAAACTCTCGGAGCTTGAGAGACCTCACAAAGTG < 41bp 0.800674641153075 0.534275683141246 0.16214433 0.22222832 prediction 0.532797916023658 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077510 chr1:24077512 synonymous SNV . 0 23 hm5C_associated_SNPs_60722 0 0 5 DDX24 POSTAR2 ENCODE chr1:24077424-24077520
64251 chr3 186795251 186795251 1 + G C rs527422300 186795247 + 186795227 186795267 41 GGGCTCCAAACTAACCATCTCGGAGCTGGGCTCCTCATTTA GGGCTCCAAACTAACCATCTCGGACCTGGGCTCCTCATTTA < 41bp 0.786315448371169 0.51992884621005 0.34367427 0.062434673 prediction 0.532773204322238 Functional Loss - ST6GAL1 ENSG00000073849 UTR3 Human protein_coding chr3:186795247 chr3:186795251 . . 0 25 hm5C_associated_SNPs_60725 0 0 3 UPF1 POSTAR2 ENCODE chr3:186795184-186795256
64251 chr10 105883512 105883512 1 + G T UCEC 105883509 + 105883489 105883529 41 TAGAGAAAGATTAAGGAAAACAAGATTTTCATTTAATTCCT TAGAGAAAGATTAAGGAAAACAATATTTTCATTTAATTCCT < 41bp 0.766382582510155 0.404352532029279 0.15966189 0.09215233 prediction 0.53276516502031 Functional Loss - SFR1 ENSG00000156384 CDS Human protein_coding chr10:105883509 chr10:105883512 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_60726 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:105883512-105883538
64251 chr9 79118131 79118131 1 + C T CESC 79118129 + 79118109 79118149 41 CTGTCAAAATGCTTCCTCCACTCGAAACACCTCTCTTTTCT CTGTCAAAATGCTTCCTCCACTTGAAACACCTCTCTTTTCT < 41bp 0.799783687528743 0.533410887385134 0.6870712 0.07528657 prediction 0.532745600287218 Functional Loss - GCNT1 ENSG00000187210 CDS Human protein_coding chr9:79118129 chr9:79118131 synonymous SNV . 0 23 hm5C_associated_SNPs_60727 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:79118095-79118131
64251 chr5 131714157 131714157 1 + G T UVM 131714155 + 131714135 131714175 41 GCTGTTGGGCTCCTTCATTTCAGGGCAGCTGTCAGACAGGT GCTGTTGGGCTCCTTCATTTCATGGCAGCTGTCAGACAGGT < 41bp 0.881978210201017 0.615607816481258 0.88174796 0.17387775 prediction 0.532740787439517 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131714155 chr5:131714157 nonsynonymous SNV 0.977 4 23 hm5C_associated_SNPs_60729 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:131714127-131714163
64251 chr12 101005850 101005850 1 + G C ACC 101005849 + 101005829 101005869 41 TTCTTTGCTCGGGACAATACCGCAAACTTCCTTCACTGGTG TTCTTTGCTCGGGACAATACCCCAAACTTCCTTCACTGGTG < 41bp 0.835227966238243 0.568872602909932 0.03733042 0.120176464 prediction 0.532710726656621 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101005849 chr12:101005850 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_60734 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:101005811-101005856
64251 chr1 78479010 78479010 1 + G T COAD 78479007 + 78478987 78479027 41 AACAAGATCCTCCAGTTATTCATGAACTTAGAGTATCACTT AACAAGATCCTCCAGTTATTCATTAACTTAGAGTATCACTT < 41bp 0.766340620255688 0.401270945210552 0.16705957 0.025476903 prediction 0.532681240511376 Functional Loss - DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78479007 chr1:78479010 stopgain 1.000 1 24 hm5C_associated_SNPs_60738 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:78478999-78479063
64251 chr3 127395161 127395161 1 + G T COAD 127395158 + 127395138 127395178 41 GTGACGTGGTCTTTGTAGTACACGGGAAGCCATTCCGGGTG GTGACGTGGTCTTTGTAGTACACTGGAAGCCATTCCGGGTG < 41bp 0.794722399802362 0.52839021889566 0.49685267 0.31817997 prediction 0.532664361813403 Functional Loss - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127395158 chr3:127395161 nonsynonymous SNV 0.224 4 24 hm5C_associated_SNPs_60740 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:127395145-127395169
64251 chr19 42585390 42585390 1 + G T UCEC 42585387 + 42585367 42585407 41 CTGCTGTGGAGGCGCTACCCCTGGTGGAAGCCATTGAGATC CTGCTGTGGAGGCGCTACCCCTGTTGGAAGCCATTGAGATC < 41bp 0.766321992419451 0.390941898630589 0.2790358 0.0397487 prediction 0.532643984838902 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42585387 chr19:42585390 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_60742 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42585359-42585400
64251 chr19 13865136 13865136 1 + C T SKCM 13865134 + 13865114 13865154 41 AGGGGTCAACAAGTACTATCCTCCAGACTTCAACCCTGAGA AGGGGTCAACAAGTACTATCCTTCAGACTTCAACCCTGAGA < 41bp 0.797001421066 0.530691274267091 0.9415566 0.14744872 prediction 0.532620293597818 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13865134 chr19:13865136 nonsynonymous SNV 0.855 4 23 hm5C_associated_SNPs_60743 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:13865112-13865144
64251 chr8 96060700 96060700 1 + G T GBM 96060697 + 96060677 96060717 41 CCACACAGCATGGTGTTTCACAAGAGGACTTTCTACGGAGG CCACACAGCATGGTGTTTCACAATAGGACTTTCTACGGAGG < 41bp 0.766302167723445 0.388690932532133 0.78895026 0.119002014 prediction 0.532604335446891 Functional Loss - NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96060697 chr8:96060700 stopgain 0.998 0 24 hm5C_associated_SNPs_60745 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:96060686-96060713
64251 chr6 26373298 26373298 1 + G T SARC 26373296 + 26373276 26373316 41 GATGAAAGAAATGGGATATGCTGCAACAGAGCGGGAAATAA GATGAAAGAAATGGGATATGCTTCAACAGAGCGGGAAATAA < 41bp 0.766298832630716 0.450020065902706 0.08435857 0.084501535 prediction 0.532597665261433 Functional Loss - BTN3A2 ENSG00000186470 CDS Human protein_coding chr6:26373296 chr6:26373298 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_60748 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:26373284-26373313
64251 chr8 67341423 67341423 1 + G C HNSC 67341419 + 67341399 67341439 41 AAAGGCAGAGCAGGACGAGGCAGAGAAGTTGCAACGCATCA AAAGGCAGAGCAGGACGAGGCAGACAAGTTGCAACGCATCA < 41bp 0.79269403084347 0.526409600142808 0.82727623 0.5424751 prediction 0.532568861401324 Functional Loss - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341419 chr8:67341423 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_60749 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:67341420-67341440
64251 chr22 44319832 44319832 1 + G T LUSC 44319829 + 44319809 44319849 41 CGGCTGGAGCTTGTCCTTCGCGGGCTGCGGCTTCCTGGGCT CGGCTGGAGCTTGTCCTTCGCGGTCTGCGGCTTCCTGGGCT < 41bp 0.909290467163572 0.643006126173531 0.9318937 0.8690978 prediction 0.532568681980082 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44319829 chr22:44319832 nonsynonymous SNV 0.977 5 24 hm5C_associated_SNPs_60750 0 0 1 DDX3X POSTAR2 ENCODE chr22:44319829-44319871
64251 chr8 97614732 97614732 1 + G T STAD 97614730 + 97614710 97614750 41 AAACCACGACGCTGAATATACAGAACAAGATACCTGCTCAG AAACCACGACGCTGAATATACATAACAAGATACCTGCTCAG < 41bp 0.766248877025376 0.431893575559576 0.12082207 0.026030868 prediction 0.532497754050752 Functional Loss - SDC2 ENSG00000169439 CDS Human protein_coding chr8:97614730 chr8:97614732 nonsynonymous SNV 0.036 0 23 hm5C_associated_SNPs_60752 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:97614652-97614740
64251 chrX 107381072 107381072 1 + G T SARC 107381070 + 107381050 107381090 41 CCTTCCCTTGAGTGCTGACACAGCTGGTGACAGGCCTCCCG CCTTCCCTTGAGTGCTGACACATCTGGTGACAGGCCTCCCG < 41bp 0.766236798085676 0.421736655488807 0.3783843 0.1793617 prediction 0.532473596171352 Functional Loss - ATG4A ENSG00000101844 CDS Human protein_coding chrX:107381070 chrX:107381072 nonsynonymous SNV 0.046 0 23 hm5C_associated_SNPs_60755 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:107381061-107381107
64251 chr19 58905907 58905907 1 + G C LUAD 58905906 + 58905886 58905926 41 GCGCTCGTGAGGCTGCCTTCCGGAACATTAAGACCATTGCT GCGCTCGTGAGGCTGCCTTCCCGAACATTAAGACCATTGCT < 41bp 0.838328715301714 0.572098441744718 0.9138601 0.822386 prediction 0.532460547113993 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58905906 chr19:58905907 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_60760 0 0 48 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:58905861-58905948
64251 chrX 65428052 65428052 1 + G T UCEC 65428049 + 65428029 65428069 41 CTGTGCATGCTCATGGAGTGCTAGAATCTACTACTGTCTGG CTGTGCATGCTCATGGAGTGCTATAATCTACTACTGTCTGG < 41bp 0.766193806704093 0.3827967633638 0.34308004 0.24575052 prediction 0.532387613408186 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65428049 chrX:65428052 stopgain 0.910 0 24 hm5C_associated_SNPs_60770 0 0 2 SND1 POSTAR2 ENCODE chrX:65427985-65428089
64251 chr5 131705782 131705782 1 + G C LUAD 131705778 + 131705758 131705798 41 AATGGCTTCACCGGCCTGTCCTCCGTGTTCCTGATAGCGAC AATGGCTTCACCGGCCTGTCCTCCCTGTTCCTGATAGCGAC < 41bp 0.794252826145314 0.528073122565706 0.09890428 0.3603844 prediction 0.532359407159216 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131705778 chr5:131705782 nonsynonymous SNV 0.584 4 25 hm5C_associated_SNPs_60771 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:131705753-131705791
64251 chrX 11130219 11130219 1 + G T LUAD 11130217 + 11130197 11130237 41 CTGCTCCTGCTGTTGCAGTTCAGGCCTCAAATGCTTCAGCG CTGCTCCTGCTGTTGCAGTTCATGCCTCAAATGCTTCAGCG < 41bp 0.766157096496934 0.41070463447881 0.27631828 0.22291932 prediction 0.532314192993867 Functional Loss - HCCS ENSG00000004961 CDS Human protein_coding chrX:11130217 chrX:11130219 nonsynonymous SNV 0.909 2 23 hm5C_associated_SNPs_60772 0 0 2 DDX3X POSTAR2 ENCODE chrX:11130169-11130274
64251 chr4 160262962 160262962 1 + G T UCEC 160262960 + 160262940 160262980 41 GATTTGAAGAAGTCATTAACCAGGAAACATTTTGGGTAGCA GATTTGAAGAAGTCATTAACCATGAAACATTTTGGGTAGCA < 41bp 0.841682570386315 0.575525620845235 0.5482664 0.12782186 prediction 0.53231389908216 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160262960 chr4:160262962 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_60773 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:160262938-160262967
64251 chr1 93575797 93575797 1 + G T UCEC 93575795 + 93575775 93575815 41 TTCTCTAAACAGAGACTCTACAGGGGCAGGTAATTCACTGG TTCTCTAAACAGAGACTCTACATGGGCAGGTAATTCACTGG < 41bp 0.766148274063052 0.44831468922581 0.9084445 0.37584132 prediction 0.532296548126104 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93575795 chr1:93575797 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_60775 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:93575788-93575814
64251 chr2 220396815 220396815 1 + G T UCEC 220396812 + 220396792 220396832 41 AGCTGGGGTTCGGGGTGTCCCCAGGCTTCCAGACCTTTGTG AGCTGGGGTTCGGGGTGTCCCCATGCTTCCAGACCTTTGTG < 41bp 0.766143694354578 0.377557871038261 0.90543854 0.7087482 prediction 0.532287388709156 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220396812 chr2:220396815 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60776 0 0 2 EIF4G2 POSTAR2 ENCODE chr2:220396815-220396822
64251 chr2 3392433 3392433 1 + A T LUSC 3392429 + 3392409 3392449 41 ACCATGCCGGGCCTCAGGTTCGACAACATCCAGGTGAGCCC ACCATGCCGGGCCTCAGGTTCGACTACATCCAGGTGAGCCC < 41bp 0.766134591461958 0.431336922537725 0.2982872 0.19972754 prediction 0.532269182923916 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3392429 chr2:3392433 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_60779 0 0 1 BUD13 POSTAR2 ENCODE chr2:3392371-3392470
64251 chr19 57839196 57839196 1 + G T PAAD 57839193 + 57839173 57839213 41 AACTCCCAATTAGGGCAATCCAAGGATCAGGATGGGCCATC AACTCCCAATTAGGGCAATCCAATGATCAGGATGGGCCATC < 41bp 0.766117666183963 0.37642863920412 0.5091503 0.36767763 prediction 0.532235332367927 Functional Loss - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57839193 chr19:57839196 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_60784 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57839180-57839200
64251 chr1 233091399 233091399 1 + G C BLCA 233091395 + 233091375 233091415 41 TTTATACCGAAGAAGTCAGACAGGGAGGGAGAAGAATAGGA TTTATACCGAAGAAGTCAGACAGGCAGGGAGAAGAATAGGA < 41bp 0.766555709338971 0.500438844829248 0.436389 0.1682817 prediction 0.532233729019444 Functional Loss - NTPCR ENSG00000135778 CDS Human protein_coding chr1:233091395 chr1:233091399 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_60785 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:233091381-233091419
64251 chr6 32139163 32139163 1 - C A LUSC 32139166 - 32139146 32139186 41 CCCAGTGCCAAGTACTTCTTCAAGATGGCCTTCTACAATGG CCCAGTGCCAAGTACTTCTTCAATATGGCCTTCTACAATGG < 41bp 0.766100038149201 0.472869545989977 0.10853845 0.07198727 prediction 0.532200076298402 Functional Loss - AGPAT1 ENSG00000204310 CDS Human protein_coding chr6:32139166 chr6:32139163 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60792 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:32139119-32139174
64251 chr13 113773099 113773099 1 + C T SKCM 113773097 + 113773077 113773117 41 TACATGTTCTGTGCCGGCTACTCGGATGGCAGCAAGGACTC TACATGTTCTGTGCCGGCTACTTGGATGGCAGCAAGGACTC < 41bp 0.766093777543311 0.492369678835106 0.3170774 0.2637418 prediction 0.532187555086621 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113773097 chr13:113773099 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_60793 0 0 6 DDX55 POSTAR2 ENCODE chr13:113773096-113773212
64251 chr5 132204156 132204156 1 + G T rs144955309 132204153 + 132204133 132204173 41 CTTAAAACTATGCTCTATTGCAGGGGTGTCCAATCTTTTAG CTTAAAACTATGCTCTATTGCAGTGGTGTCCAATCTTTTAG < 41bp 0.797434425089884 0.531359310372197 0.94309795 0.7407765 prediction 0.532150229435376 Functional Loss - UQCRQ ENSG00000164405 downstream Human protein_coding chr5:132204153 chr5:132204156 . . 0 24 hm5C_associated_SNPs_60798 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:132204139-132204168
64251 chr9 136217511 136217511 1 + G T COAD 136217508 + 136217488 136217528 41 GGGGTCCCTTACTGCATTATCAAGGGAAAGGCAAGACTGGG GGGGTCCCTTACTGCATTATCAATGGAAAGGCAAGACTGGG < 41bp 0.766064396969155 0.414417139218795 0.93979293 0.43128252 prediction 0.53212879393831 Functional Loss - RPL7A ENSG00000148303 CDS Human protein_coding chr9:136217508 chr9:136217511 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60799 0 0 58 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:136217480-136217520
64251 chr16 2816129 2816129 1 + G T LUAD 2816126 + 2816106 2816146 41 CCCGTGGAAACGCTCTAGATCTCGAGCCTCTCCAGCCACTC CCCGTGGAAACGCTCTAGATCTCTAGCCTCTCCAGCCACTC < 41bp 0.766055571633766 0.390385898526608 0.6557614 0.28665876 prediction 0.532111143267532 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816126 chr16:2816129 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60804 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2816068-2816556
64251 chr1 171510257 171510257 1 + C T UCEC 171510255 + 171510235 171510275 41 CAGGGGTGGTAGGGGACACACTCGAGATTATCCTCAGTATA CAGGGGTGGTAGGGGACACACTTGAGATTATCCTCAGTATA < 41bp 0.78585673804334 0.519807755989416 0.46520972 0.30203375 prediction 0.532097964107848 Functional Loss - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171510255 chr1:171510257 stopgain 0.998 0 23 hm5C_associated_SNPs_60805 0 0 28 FMR1 POSTAR2 GSE39682,GSM977616 chr1:171510200-171510260
64251 chr1 32696724 32696724 1 + G T SARC 32696722 + 32696702 32696742 41 CTATCTTTTTCCAGCTACAGCAGCGGCGGCGAAGATGGTTA CTATCTTTTTCCAGCTACAGCATCGGCGGCGAAGATGGTTA < 41bp 0.766048135896776 0.442034556645185 0.380636 0.19025946 prediction 0.532096271793553 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32696722 chr1:32696724 nonsynonymous SNV 0.719 4 23 hm5C_associated_SNPs_60806 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr1:32696713-32696740
64251 chr12 118573966 118573966 1 + G T rs149153511 118573963 + 118573943 118573983 41 TCCGCGTCGCCTCTGTCGCCCGCGCCTGGCCTACCGCGGCA TCCGCGTCGCCTCTGTCGCCCGCTCCTGGCCTACCGCGGCA < 41bp 0.766047605670026 0.469201655600886 0.52213544 0.36658472 prediction 0.532095211340051 Functional Loss - PEBP1 ENSG00000089220 UTR5 Human protein_coding chr12:118573963 chr12:118573966 . . 0 24 hm5C_associated_SNPs_60807 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:118573900-118574020
64251 chr1 54427995 54427995 1 + C T rs35818146 54427993 + 54427973 54428013 41 TCAAAACCGTCAAGCACAAGCTCCAGACCCACATAGGCCTT TCAAAACCGTCAAGCACAAGCTTCAGACCCACATAGGCCTT < 41bp 0.818434237912186 0.552400256215175 0.6916459 0.30259988 prediction 0.532067963394022 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54427993 chr1:54427995 synonymous SNV . 0 23 hm5C_associated_SNPs_60810 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:54427968-54427996
64251 chr12 56625289 56625289 1 + G T SARC 56625287 + 56625267 56625307 41 TTCAGGGGCTTCGCCTGGGACAGCATGGGCCTCTGACTGGA TTCAGGGGCTTCGCCTGGGACATCATGGGCCTCTGACTGGA < 41bp 0.869827006451649 0.60379682532993 0.5032389 0.39006042 prediction 0.532060362243439 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625287 chr12:56625289 nonsynonymous SNV 0.945 0 23 hm5C_associated_SNPs_60811 0 0 1 PPIG POSTAR2 ENCODE chr12:56625283-56625330
64251 chr11 2943376 2943376 1 + G T SKCM 2943373 + 2943353 2943393 41 GGGCAGCTGAGCAGCCACTTCTCGGAGGAGGTGCTGCTCCG GGGCAGCTGAGCAGCCACTTCTCTGAGGAGGTGCTGCTCCG < 41bp 0.910290242892932 0.644285842483932 0.76304334 0.42479432 prediction 0.532008800818 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2943373 chr11:2943376 synonymous SNV . 0 24 hm5C_associated_SNPs_60812 0 0 9 GRWD1 POSTAR2 ENCODE chr11:2943315-2943392
64251 chr8 120233914 120233914 1 + A T COAD 120233910 + 120233890 120233930 41 GGATGGGTCATGTTTGTGTCCGTGACAGCGTTTTTCTTTTC GGATGGGTCATGTTTGTGTCCGTGTCAGCGTTTTTCTTTTC < 41bp 0.765998376871752 0.458179375142693 0.10646477 0.058523625 prediction 0.531996753743504 Functional Loss - MAL2 ENSG00000147676 CDS Human protein_coding chr8:120233910 chr8:120233914 nonsynonymous SNV 0.949 0 25 hm5C_associated_SNPs_60814 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:120233902-120233934
64251 chr17 1675246 1675246 1 + C T BLCA 1675244 + 1675224 1675264 41 CAGAGTCCTGACGGGCAACCCTCGCTTGGACCTGCAAGAGA CAGAGTCCTGACGGGCAACCCTTGCTTGGACCTGCAAGAGA < 41bp 0.784176663775795 0.518189858152786 0.12844792 0.04451877 prediction 0.531973611246018 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1675244 chr17:1675246 nonsynonymous SNV 0.289 5 23 hm5C_associated_SNPs_60817 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr17:1675226-1675263
64251 chrX 68836097 68836097 1 + G T rs763226707 68836095 + 68836075 68836115 41 CGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGG CGCCTGTCAGAGGTCGTGAACGTCTGAGGCAGACGCAGCGG < 41bp 0.765979465710656 0.495974847864444 0.90214133 0.5241907 prediction 0.531958931421312 Functional Loss - EDA ENSG00000158813 UTR5 Human protein_coding chrX:68836095 chrX:68836097 . . 0 23 hm5C_associated_SNPs_60818 0 0 1 DDX3X POSTAR2 ENCODE chrX:68835956-68836274
64251 chr12 520947 520947 1 + A C rs4980895 520943 + 520923 520963 41 GTCTCCAAACGTGGTGTTGCCGTCAGTGGTCCCACCAAGAG GTCTCCAAACGTGGTGTTGCCGTCCGTGGTCCCACCAAGAG < 41bp 0.765979169150762 0.360680419850453 0.42838928 0.4070196 prediction 0.531958338301524 Functional Loss - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:520943 chr12:520947 nonsynonymous SNV 0.013 1 25 hm5C_associated_SNPs_60819 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:520930-520963
64251 chr1 219366582 219366582 1 + G T GBM 219366580 + 219366560 219366600 41 AAAAGTGGCATCAAGAAGAACAGGATATTAATAGGTAAGAC AAAAGTGGCATCAAGAAGAACATGATATTAATAGGTAAGAC < 41bp 0.765968965217414 0.471517625561045 0.479704 0.26109233 prediction 0.531937930434828 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219366580 chr1:219366582 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_60821 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:219366486-219366583
64251 chr14 69908877 69908877 1 + C T LGG 69908875 + 69908855 69908895 41 TCCATGAACATGAGCACAGCCACGACCACACACAGCTGCAT TCCATGAACATGAGCACAGCCATGACCACACACAGCTGCAT < 41bp 0.808098215114859 0.542130180314489 0.05035329 0.04230681 prediction 0.53193606960074 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69908875 chr14:69908877 synonymous SNV . 0 23 hm5C_associated_SNPs_60822 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:69908857-69908881
64251 chr12 69080776 69080776 1 + G C BRCA 69080772 + 69080752 69080792 41 CGGGTCGAAGGGCTTGCTTCCGGAGAGCGGGAAGGCTAAAA CGGGTCGAAGGGCTTGCTTCCGGACAGCGGGAAGGCTAAAA < 41bp 0.792737766668313 0.526801202414394 0.889017 0.47415423 prediction 0.531873128507838 Functional Loss - NUP107 ENSG00000247363 ncRNA_exonic Human lincRNA chr12:69080772 chr12:69080776 . . 0 25 hm5C_associated_SNPs_60832 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:69080760-69080780
64251 chr18 10525996 10525996 1 + A C rs115800719 10525992 + 10525972 10526012 41 GTAGCCGCTCGACTGTCGCGCTGCACCAGCTTCCTCCTCGG GTAGCCGCTCGACTGTCGCGCTGCCCCAGCTTCCTCCTCGG < 41bp 0.895146932911538 0.629215230231545 0.20457304 0.22191781 prediction 0.531863405359984 Functional Loss - NAPG ENSG00000134265 UTR5 Human protein_coding chr18:10525992 chr18:10525996 . . 0 25 hm5C_associated_SNPs_60833 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:10525991-10526008
64251 chr16 56875739 56875739 1 + C T HNSC 56875737 + 56875717 56875757 41 CCCAGCGAGTCATCGAGGACCGCGACTCTGTAAGATCCCAG CCCAGCGAGTCATCGAGGACCGTGACTCTGTAAGATCCCAG < 41bp 0.778589627844655 0.512660745871194 0.18391031 0.26388562 prediction 0.531857763946922 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56875737 chr16:56875739 synonymous SNV . 0 23 hm5C_associated_SNPs_60834 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:56875727-56875747
64251 chr11 63963214 63963214 1 + C T HNSC 63963212 + 63963192 63963232 41 GGAAGAGATTGCAACACCTCCACCACCACCCCCTCCCAAAA GGAAGAGATTGCAACACCTCCATCACCACCCCCTCCCAAAA < 41bp 0.765921057964805 0.480804035808993 0.026782423 0.012126803 prediction 0.53184211592961 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63963212 chr11:63963214 nonsynonymous SNV 0.024 1 23 hm5C_associated_SNPs_60835 0 0 8 RBM15 POSTAR2 GSE78030,GSM2064710 chr11:63963200-63963220
64251 chr6 7231467 7231467 1 + G T LUSC 7231465 + 7231445 7231485 41 GCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCCCCGCTG GCACAGCCTTGCTGCGTCCACTTCGGCCCAAGCCCCCGCTG < 41bp 0.76591213007571 0.44598342850458 0.36655444 0.14195749 prediction 0.53182426015142 Functional Loss - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231465 chr6:7231467 synonymous SNV . 0 23 hm5C_associated_SNPs_60837 0 0 3 GRWD1 POSTAR2 ENCODE chr6:7231401-7231470
64251 chr14 73572603 73572603 1 + G T rs556945481 73572601 + 73572581 73572621 41 ATCGTGAAAGGGAACGAGAGCGGGAAAGAGAGAGAGAGAGA ATCGTGAAAGGGAACGAGAGCGTGAAAGAGAGAGAGAGAGA < 41bp 0.866073345866373 0.600175523807178 0.66681445 0.14616862 prediction 0.53179564411839 Functional Loss - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73572601 chr14:73572603 synonymous SNV . 0 23 hm5C_associated_SNPs_60840 0 0 20 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr14:73572580-73572620
64251 chr12 56515203 56515203 1 + C T UCEC 56515201 + 56515181 56515221 41 GCCAAGGTCATAACCCTGAGCTCCACTGCACCAGCGACTGA GCCAAGGTCATAACCCTGAGCTTCACTGCACCAGCGACTGA < 41bp 0.765893713627638 0.488647950213801 0.23021325 0.060260743 prediction 0.531787427255276 Functional Loss - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515201 chr12:56515203 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_60843 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:56515203-56515247
64251 chr1 156770252 156770252 1 + G T UCEC 156770249 + 156770229 156770269 41 ACCCAAGCCAAATATGGATTCTAGGGCTCTGGAACTGATTG ACCCAAGCCAAATATGGATTCTATGGCTCTGGAACTGATTG < 41bp 0.7658874217495 0.386991479558486 0.40728742 0.24778661 prediction 0.531774843499001 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156770249 chr1:156770252 stoploss 0.971 0 24 hm5C_associated_SNPs_60846 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156770170-156770290
64251 chr3 127338007 127338007 1 + G T UCEC 127338005 + 127337985 127338025 41 ATGGCGTGGAGCCCCTGCCCCAGGAGGTCCTGAAGAAGTAC ATGGCGTGGAGCCCCTGCCCCATGAGGTCCTGAAGAAGTAC < 41bp 0.879094514962151 0.613252689475577 0.8781228 0.3266812 prediction 0.531683650973148 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127338005 chr3:127338007 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_60853 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:127337978-127338016
64251 chr11 118955631 118955631 1 + A T LUSC 118955627 + 118955607 118955647 41 TGCGGAGACCAGGAGTCAGACTGTAGGACGACCTCGGGTCC TGCGGAGACCAGGAGTCAGACTGTTGGACGACCTCGGGTCC < 41bp 0.765804133570034 0.477504585430745 0.2672766 0.22248554 prediction 0.531608267140068 Functional Loss - HMBS ENSG00000256269 UTR5 Human protein_coding chr11:118955627 chr11:118955631 . . 0 25 hm5C_associated_SNPs_60863 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118955616-118955661
64251 chr21 44151921 44151921 1 + G T STAD 44151919 + 44151899 44151939 41 AACCACAAGCCGTGGCCAGTCTGCTGAGAGACCACTGAGGG AACCACAAGCCGTGGCCAGTCTTCTGAGAGACCACTGAGGG < 41bp 0.768926791584197 0.503132743907807 0.17787471 0.0833697 prediction 0.531588095352779 Functional Loss - PDE9A ENSG00000160191 CDS Human protein_coding chr21:44151919 chr21:44151921 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_60865 0 0 1 PPIG POSTAR2 ENCODE chr21:44151886-44151984
64251 chr16 68842726 68842726 1 + A T OV 68842722 + 68842702 68842742 41 GGCTGAAGGTGACAGAGCCTCTGGATAGAGAACGCATTGCC GGCTGAAGGTGACAGAGCCTCTGGTTAGAGAACGCATTGCC < 41bp 0.87236717309511 0.606604558804885 0.14005443 0.09010354 prediction 0.531525228580452 Functional Loss - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68842722 chr16:68842726 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_60868 0 0 1 LIN28B POSTAR2 ENCODE chr16:68842646-68842730
64251 chr1 3390034 3390034 1 + C T BLCA 3390032 + 3390012 3390052 41 TGCGGGGGCCTGCCCATGCTCTCCTTCCTGATCCTCCCCAT TGCGGGGGCCTGCCCATGCTCTTCTTCCTGATCCTCCCCAT < 41bp 0.76627367629468 0.500513785862667 0.054116726 0.06615102 prediction 0.531519780864026 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3390032 chr1:3390034 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_60869 0 0 1 PPIG POSTAR2 ENCODE chr1:3390012-3390086
64251 chr17 686416 686416 1 + G T UCEC 686413 + 686393 686433 41 AGGCTCATTTCAGACGCTCTCAAGGCTGGAGCTGTGCCAAA AGGCTCATTTCAGACGCTCTCAATGCTGGAGCTGTGCCAAA < 41bp 0.765754296373907 0.368615846253494 0.9188653 0.34590477 prediction 0.531508592747814 Functional Loss - MRM3 ENSG00000171861 CDS Human protein_coding chr17:686413 chr17:686416 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_60871 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:686391-686425
64251 chr2 183993129 183993129 1 + G T BLCA 183993126 + 183993106 183993146 41 AGCTCCGGTGACTCCACAACCTCGATCAATTAGTGGCCCTT AGCTCCGGTGACTCCACAACCTCTATCAATTAGTGGCCCTT < 41bp 0.876784607300543 0.611055723080268 0.7619211 0.92279375 prediction 0.53145776844055 Functional Loss - NUP35 ENSG00000163002 CDS Human protein_coding chr2:183993126 chr2:183993129 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_60872 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:183993120-183993140
64251 chr3 32180158 32180158 1 + G T UCEC 32180156 + 32180136 32180176 41 ATTCCCCACCAGTTCATTCACAGAATCTGTGATGAGATCAC ATTCCCCACCAGTTCATTCACATAATCTGTGATGAGATCAC < 41bp 0.765727353110121 0.419989006514156 0.41698325 0.26613778 prediction 0.531454706220241 Functional Loss - GPD1L ENSG00000152642 CDS Human protein_coding chr3:32180156 chr3:32180158 stopgain 0.946 1 23 hm5C_associated_SNPs_60873 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:32180121-32180159
64251 chr15 89011240 89011240 1 + G T SARC 89011238 + 89011218 89011258 41 GTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGGTG GTTGAACAGAACGCGGCTCCCATCCACACCAAGTTCAGGTG < 41bp 0.765722104551589 0.426238816469088 0.06881884 0.086474806 prediction 0.531444209103177 Functional Loss - MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89011238 chr15:89011240 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_60875 0 0 2 PRPF8 POSTAR2 ENCODE chr15:89011220-89011304
64251 chr19 806421 806421 1 + G T UCEC 806419 + 806399 806439 41 CTTTTCCAGGCCTTTCCGTTCCGAACGTCCACGGCGCCCTG CTTTTCCAGGCCTTTCCGTTCCTAACGTCCACGGCGCCCTG < 41bp 0.765712053182086 0.416891177902785 0.8283755 0.3416933 prediction 0.531424106364172 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806419 chr19:806421 synonymous SNV . 0 23 hm5C_associated_SNPs_60879 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr3 47284703 47284703 1 + G T GBM 47284701 + 47284681 47284721 41 ATCCAAGTCCTTCCCATTCACAGGGCTGCTGGCACCTTCCT ATCCAAGTCCTTCCCATTCACATGGCTGCTGGCACCTTCCT < 41bp 0.885502136060482 0.619819258157471 0.9073667 0.27566645 prediction 0.531365755806023 Functional Loss - KIF9 ENSG00000088727 CDS Human protein_coding chr3:47284701 chr3:47284703 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_60883 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:47284687-47284711
64251 chr19 14516692 14516692 1 + A T KIRC 14516688 + 14516668 14516708 41 ACCACCATACACCTGCACCTCTGCATCTGCCTCTTCGTGGG ACCACCATACACCTGCACCTCTGCTTCTGCCTCTTCGTGGG < 41bp 0.882042080054039 0.61636038748851 0.09231806 0.03491199 prediction 0.531363385131059 Functional Loss - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14516688 chr19:14516692 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_60884 0 0 1 FUS POSTAR2 SRX029328 chr19:14516666-14516696
64251 chr3 9934623 9934623 1 + G T UCEC 9934620 + 9934600 9934640 41 GTGACTCTCAAGTATGAAATCAAGAAGCTGATCTACGTACA GTGACTCTCAAGTATGAAATCAATAAGCTGATCTACGTACA < 41bp 0.896503285079276 0.630826296452089 0.30554575 0.09903714 prediction 0.531353977254374 Functional Loss - JAGN1 ENSG00000171135 CDS Human protein_coding chr3:9934620 chr3:9934623 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_60885 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:9934597-9934647
64251 chr8 22105999 22105999 1 + C T STAD 22105997 + 22105977 22106017 41 CAGACTCTCTTTGGCAGTTCCTCGATGACCCCGGCCTGAGG CAGACTCTCTTTGGCAGTTCCTTGATGACCCCGGCCTGAGG < 41bp 0.813485122049553 0.547813626283531 0.90209323 0.08821282 prediction 0.531342991532044 Functional Loss - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22105997 chr8:22105999 stopgain . 0 23 hm5C_associated_SNPs_60886 0 0 7 FMR1 POSTAR2 ENCODE chr8:22105993-22106067
64251 chr15 43669260 43669260 1 + G T LUSC 43669257 + 43669237 43669277 41 TATCACATGTCAACTACTTCCTAGACCAGGTATGCTGCCCA TATCACATGTCAACTACTTCCTATACCAGGTATGCTGCCCA < 41bp 0.765661990538553 0.387358344610887 0.10480353 0.074255526 prediction 0.531323981077106 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43669257 chr15:43669260 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_60888 0 0 2 BUD13 POSTAR2 ENCODE chr15:43669216-43669300
64251 chr16 29851519 29851519 1 + C T LUSC 29851517 + 29851497 29851537 41 AGGGAGAGAAGTCTTTTTTCCTCCAGCCAGGAGAGCAGCTG AGGGAGAGAAGTCTTTTTTCCTTCAGCCAGGAGAGCAGCTG < 41bp 0.765661464365738 0.472275596230591 0.92455924 0.14553452 prediction 0.531322928731476 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29851517 chr16:29851519 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_60889 0 0 2 RPS3 POSTAR2 ENCODE chr16:29851516-29851582
64251 chr8 17401040 17401040 1 + G T LUSC 17401037 + 17401017 17401057 41 GGGGAGGTGGCCAAGGCAGACTCGGGCCCCAGCATCGTGGT GGGGAGGTGGCCAAGGCAGACTCTGGCCCCAGCATCGTGGT < 41bp 0.906724102622527 0.641064372667503 0.10710731 0.117209256 prediction 0.531319459910047 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17401037 chr8:17401040 synonymous SNV . 0 24 hm5C_associated_SNPs_60890 0 0 3 DDX3X POSTAR2 ENCODE chr8:17400954-17401056
64251 chr5 76326364 76326364 1 + G T rs144102562 76326361 + 76326341 76326381 41 CAGGAAAGTTTTCCGGTTTGCAGGCCGCGCACATCGGGCAG CAGGAAAGTTTTCCGGTTTGCAGTCCGCGCACATCGGGCAG < 41bp 0.765655802265279 0.422927154860318 0.4888935 0.09776971 prediction 0.531311604530559 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76326361 chr5:76326364 unknown . 0 24 hm5C_associated_SNPs_60892 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr5:76326360-76326380
64251 chr19 10794629 10794629 1 + C T UCEC 10794627 + 10794607 10794647 41 AGCTATGGGTACGGAGGCAACTCGGCGACAGCAGGCTACAG AGCTATGGGTACGGAGGCAACTTGGCGACAGCAGGCTACAG < 41bp 0.765644408532037 0.499440669631074 0.5843768 0.3991009 prediction 0.531288817064074 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794627 chr19:10794629 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_60894 0 0 10 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:10794619-10794640
64251 chr5 68558047 68558047 1 + C T SKCM 68558045 + 68558025 68558065 41 TCTTTAGGTGGTATCGGGCCCCCGAGTTACTATTTGGAGCT TCTTTAGGTGGTATCGGGCCCCTGAGTTACTATTTGGAGCT < 41bp 0.765629013490709 0.485759665717322 0.059788316 0.040904462 prediction 0.531258026981418 Functional Loss - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68558045 chr5:68558047 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_60900 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:68558042-68558060
64251 chr1 229773079 229773079 1 + G T UCEC 229773076 + 229773056 229773096 41 AAGTGATTTCTGCCTTACAGCTGGACAGCCTCTTGCCACCC AAGTGATTTCTGCCTTACAGCTGTACAGCCTCTTGCCACCC < 41bp 0.765622349680595 0.37804457201577 0.286063 0.09397814 prediction 0.53124469936119 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229773076 chr1:229773079 nonsynonymous SNV 0.881 3 24 hm5C_associated_SNPs_60902 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:229773034-229773088
64251 chr14 95030295 95030295 1 + C T SKCM 95030293 + 95030273 95030313 41 CTTGCAAAATTCCTGAATGACACCATGGCCGTCTATGAGGC CTTGCAAAATTCCTGAATGACATCATGGCCGTCTATGAGGC < 41bp 0.78622513905471 0.520605992661702 0.07159513 0.034467936 prediction 0.531238292786018 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030293 chr14:95030295 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_60903 0 0 1 DKC1 POSTAR2 ENCODE chr14:95030235-95030321
64251 chr3 185347616 185347616 1 + A T LUAD 185347612 + 185347592 185347632 41 AGAAGATGGTGTGGGAAATCCTTCATCAGCAGTTGCTGTGA AGAAGATGGTGTGGGAAATCCTTCTTCAGCAGTTGCTGTGA < 41bp 0.765612029952947 0.435779424388876 0.6127944 0.13111696 prediction 0.531224059905893 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185347612 chr3:185347616 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_60906 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:185347568-185347634
64251 chr6 44198149 44198149 1 + G C COAD 44198145 + 44198125 44198165 41 GGCCTTCTGCCTGCCAGCTACACGGCCCCCATCATGAGTGG GGCCTTCTGCCTGCCAGCTACACGCCCCCCATCATGAGTGG < 41bp 0.790067649875633 0.524492642768535 0.49962533 0.21813992 prediction 0.531150014214195 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198145 chr6:44198149 nonsynonymous SNV 0.946 3 25 hm5C_associated_SNPs_60909 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44198126-44198160
64251 chr12 120650286 120650286 1 + G T OV 120650283 + 120650263 120650303 41 CGGTGATGGGCTTCTGGCAGCCAGAACACAGCGAGCCGCGC CGGTGATGGGCTTCTGGCAGCCATAACACAGCGAGCCGCGC < 41bp 0.765564535045788 0.384110314808057 0.25936562 0.111287594 prediction 0.531129070091576 Functional Loss - PXN ENSG00000089159 CDS Human protein_coding chr12:120650283 chr12:120650286 nonsynonymous SNV 0.601 1 24 hm5C_associated_SNPs_60913 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:120650267-120650315
64251 chr8 22106630 22106630 1 + A T LUAD 22106626 + 22106606 22106646 41 TCCCAAAGCAGCCAGGAAGACTCCAGGCCTCCCGAAGGATG TCCCAAAGCAGCCAGGAAGACTCCTGGCCTCCCGAAGGATG < 41bp 0.76556147997047 0.421063086510385 0.90744877 0.30384734 prediction 0.53112295994094 Functional Loss - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22106626 chr8:22106630 synonymous SNV . 0 25 hm5C_associated_SNPs_60914 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22106621-22106643
64251 chr8 22106628 22106628 1 + C T SKCM 22106626 + 22106606 22106646 41 TCCCAAAGCAGCCAGGAAGACTCCAGGCCTCCCGAAGGATG TCCCAAAGCAGCCAGGAAGACTTCAGGCCTCCCGAAGGATG < 41bp 0.76556147997047 0.478887755230597 0.90744877 0.18020537 prediction 0.53112295994094 Functional Loss - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22106626 chr8:22106628 nonsynonymous SNV 0.732 1 23 hm5C_associated_SNPs_60915 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22106621-22106643
64251 chr7 141311018 141311018 1 + G T UCEC 141311015 + 141310995 141311035 41 ACAGATTATGAGGGACAAGCCAAGAAACTCCTGGAACTGAT ACAGATTATGAGGGACAAGCCAATAAACTCCTGGAACTGAT < 41bp 0.765552714003713 0.403264230758788 0.22466686 0.34435844 prediction 0.531105428007426 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141311015 chr7:141311018 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60917 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:141310992-141311030
64251 chr16 2514567 2514567 1 + G T CESC 2514565 + 2514545 2514585 41 CCCTGGTAAGCGCTGCACAGCCGCAGGGGCCGCCCTGGCTG CCCTGGTAAGCGCTGCACAGCCTCAGGGGCCGCCCTGGCTG < 41bp 0.854564806449729 0.589013288572799 0.28274995 0.12859762 prediction 0.53110303575386 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2514565 chr16:2514567 synonymous SNV . 0 23 hm5C_associated_SNPs_60918 0 0 5 EFTUD2 POSTAR2 ENCODE chr16:2514486-2514572
64251 chr5 179264450 179264450 1 - G A PRAD 179264452 - 179264432 179264472 41 GGTCCTGGAGGCACAGAATCCTCGACCCACACGACTATGTG GGTCCTGGAGGCACAGAATCCTTGACCCACACGACTATGTG < 41bp 0.768628263358202 0.503097263568259 0.6570392 0.2547415 prediction 0.531061999579885 Functional Loss - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264452 chr5:179264450 stopgain 0.001 0 23 hm5C_associated_SNPs_60923 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:179264428-179264466
64251 chr15 66840985 66840985 1 + A C rs11858742 66840981 + 66840961 66841001 41 ACGAGCACCACAAATGAGAACAGGATCATTTTAGTAAATAC ACGAGCACCACAAATGAGAACAGGCTCATTTTAGTAAATAC < 41bp 0.765496806066379 0.440116100912685 0.1422784 0.18444675 prediction 0.530993612132757 Functional Loss - ZWILCH ENSG00000174442 UTR3 Human protein_coding chr15:66840981 chr15:66840985 . . 0 25 hm5C_associated_SNPs_60930 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:66840954-66840986
64251 chr11 129993557 129993557 1 + C T OV 129993555 + 129993535 129993575 41 GCCCTGCCGGGCCGTGATGCCTCGTTGGTACTTCGACCTCT GCCCTGCCGGGCCGTGATGCCTTGTTGGTACTTCGACCTCT < 41bp 0.785776381656036 0.520288009908544 0.144862 0.13388774 prediction 0.530976743494983 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129993555 chr11:129993557 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_60933 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:129993527-129993569
64251 chr21 33038808 33038808 1 + C T UCEC 33038806 + 33038786 33038826 41 TTAATCCTCTATCCAGAAAACACGGTGGGCCAAAGGATGAA TTAATCCTCTATCCAGAAAACATGGTGGGCCAAAGGATGAA < 41bp 0.768792275658014 0.503313343607358 0.28175473 0.2941347 prediction 0.530957864101312 Functional Loss - SOD1 ENSG00000142168 CDS Human protein_coding chr21:33038806 chr21:33038808 synonymous SNV . 0 23 hm5C_associated_SNPs_60935 0 0 19 CSTF2T POSTAR2 GSE37401,GSM917677 chr21:33038772-33038808
64251 chr19 49377435 49377435 1 + G T UCEC 49377432 + 49377412 49377452 41 GATGAAGAGGAGGGTGAGGTCAAGGCTTTGGGGGCAGCTGA GATGAAGAGGAGGGTGAGGTCAATGCTTTGGGGGCAGCTGA < 41bp 0.910251174870527 0.644773466901018 0.8809673 0.5308473 prediction 0.530955415939018 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377432 chr19:49377435 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_60936 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49377423-49377445
64251 chr16 85695049 85695049 1 + G T LUAD 85695047 + 85695027 85695067 41 GGAAGCGTGAGCCTGCCCCTCTGGACAAGTACCAGCCACCT GGAAGCGTGAGCCTGCCCCTCTTGACAAGTACCAGCCACCT < 41bp 0.876925815368439 0.611462116047667 0.555321 0.17385101 prediction 0.530927398641545 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85695047 chr16:85695049 synonymous SNV . 0 23 hm5C_associated_SNPs_60939 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:85695031-85695061
64251 chr15 42127420 42127420 1 + G T rs75094146 42127418 + 42127398 42127438 41 TGCCCTGGGCCTCCGAAGCCCTGGGTGAGTGGAGGTGGGGT TGCCCTGGGCCTCCGAAGCCCTTGGTGAGTGGAGGTGGGGT < 41bp 0.765454759180944 0.422142964696525 0.23244378 0.15258601 prediction 0.530909518361887 Functional Loss - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127418 chr15:42127420 synonymous SNV . 0 23 hm5C_associated_SNPs_60941 0 0 1 PPIG POSTAR2 ENCODE chr15:42127386-42127422
64251 chr20 4680383 4680383 1 + A C LUAD 4680379 + 4680359 4680399 41 CCCATGGATGAGTACAGCAACCAGAACAACTTTGTGCACGA CCCATGGATGAGTACAGCAACCAGCACAACTTTGTGCACGA < 41bp 0.765447952246614 0.364780668693943 0.14906302 0.07360703 prediction 0.530895904493228 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680379 chr20:4680383 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_60943 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:4680355-4680383
64251 chr11 609438 609438 1 + G T UCEC 609435 + 609415 609455 41 AGAGGGAGGTGTCATTGATGCACGATGAAGACCCTTCGCAG AGAGGGAGGTGTCATTGATGCACTATGAAGACCCTTCGCAG < 41bp 0.898776207735323 0.633328440995412 0.5070413 0.38667667 prediction 0.530895533479821 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:609435 chr11:609438 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_60944 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:609420-609440
64251 chr5 94903724 94903724 1 + G T LUAD 94903722 + 94903702 94903742 41 GAACACAGAAATTTGGGAAACTGGACTATACTTCAGGACAT GAACACAGAAATTTGGGAAACTTGACTATACTTCAGGACAT < 41bp 0.835266916819239 0.569820929580554 0.84695685 0.4460369 prediction 0.530891974477371 Functional Loss - ARSK ENSG00000164291 CDS Human protein_coding chr5:94903722 chr5:94903724 synonymous SNV . 0 23 hm5C_associated_SNPs_60945 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:94903707-94903735
64251 chr4 69688070 69688070 1 + G T UCEC 69688068 + 69688048 69688088 41 GTCAATGGTCAGTAACATGACAGAAGAAAGGGCCAACGTAA GTCAATGGTCAGTAACATGACATAAGAAAGGGCCAACGTAA < 41bp 0.765434496925688 0.438123279992797 0.15230858 0.069639325 prediction 0.530868993851376 Functional Loss - UGT2B10 ENSG00000109181 CDS Human protein_coding chr4:69688068 chr4:69688070 stopgain 0.009 0 23 hm5C_associated_SNPs_60948 0 0 1 SND1 POSTAR2 ENCODE chr4:69688065-69688096
64251 chr18 59854909 59854909 1 + A T LUAD 59854905 + 59854885 59854925 41 TGGCTCTGCGGGCTCGCTGTCGCCACAGGATCCCGTGGCCT TGGCTCTGCGGGCTCGCTGTCGCCTCAGGATCCCGTGGCCT < 41bp 0.854289389125623 0.588882414232348 0.88492525 0.41130424 prediction 0.53081394978655 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59854905 chr18:59854909 synonymous SNV . 0 25 hm5C_associated_SNPs_60952 0 0 2 EIF3H POSTAR2 ENCODE chr18:59854839-59854959
64251 chr18 77097441 77097441 1 + G T STAD 77097439 + 77097419 77097459 41 GCTGGAGATGCTGCGCAACGCCGGGATCAAGGTACTGCAGG GCTGGAGATGCTGCGCAACGCCTGGATCAAGGTACTGCAGG < 41bp 0.765403247619376 0.431010536250233 0.86149657 0.22256017 prediction 0.530806495238752 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77097439 chr18:77097441 nonsynonymous SNV 0.387 5 23 hm5C_associated_SNPs_60954 0 0 2 PRPF8 POSTAR2 ENCODE chr18:77097393-77097479
64251 chr3 39433056 39433056 1 + G T LUSC 39433053 + 39433033 39433073 41 AGTCATGCTGGGGGTGGGCTCTCGCTCTGTTGCAGGGGTCT AGTCATGCTGGGGGTGGGCTCTCTCTCTGTTGCAGGGGTCT < 41bp 0.765398918166627 0.373535298267997 0.3166001 0.25712585 prediction 0.530797836333254 Functional Loss - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39433053 chr3:39433056 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_60955 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:39433032-39433065
64251 chr20 3556571 3556571 1 + G T SARC 3556568 + 3556548 3556588 41 TGCAATGACCATTGTGTCCCCAGGAACCACAGCTGCTCAGA TGCAATGACCATTGTGTCCCCAGTAACCACAGCTGCTCAGA < 41bp 0.765392331863307 0.376830078406311 0.89466035 0.3801354 prediction 0.530784663726614 Functional Loss - ATRN ENSG00000088812 CDS Human protein_coding chr20:3556568 chr20:3556571 nonsynonymous SNV 0.952 0 24 hm5C_associated_SNPs_60958 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:3556539-3556577
64251 chr2 99995567 99995567 1 + G T UCEC 99995564 + 99995544 99995584 41 CGTACTTGGGCATGTGGACACAGGGAAGACAAAAATTCTAG CGTACTTGGGCATGTGGACACAGTGAAGACAAAAATTCTAG < 41bp 0.765386008390109 0.394105830588292 0.42855668 0.31005168 prediction 0.530772016780217 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99995564 chr2:99995567 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_60960 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:99995560-99995584
64251 chr22 18028057 18028057 1 + C T BLCA 18028055 + 18028035 18028075 41 AAGGGCAAGAATCCCTGGCCCTCGGATAGCAGCTACCCCGG AAGGGCAAGAATCCCTGGCCCTTGGATAGCAGCTACCCCGG < 41bp 0.765376355387443 0.500015955516554 0.23441109 0.15131861 prediction 0.530720799741779 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18028055 chr22:18028057 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_60964 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:18028032-18028064
64251 chr22 20936960 20936960 1 + G T LUSC 20936958 + 20936938 20936978 41 CGGGCCAGCAGGTGCAGACCCCGCAGTCGATGCCCCCTCCC CGGGCCAGCAGGTGCAGACCCCTCAGTCGATGCCCCCTCCC < 41bp 0.860760700489559 0.59540578707699 0.578247 0.34898037 prediction 0.530709826825137 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20936958 chr22:20936960 synonymous SNV . 0 23 hm5C_associated_SNPs_60966 0 0 5 DDX59 POSTAR2 ENCODE chr22:20936900-20937006
64251 chr19 53960882 53960882 1 + G T rs188896157 53960880 + 53960860 53960900 41 AATTGACATTAGGGTCAATTCAGCATTGACTTGAGTTTGTA AATTGACATTAGGGTCAATTCATCATTGACTTGAGTTTGTA < 41bp 0.768042970992401 0.502691824933513 0.1708211 0.04581046 prediction 0.530702292117777 Functional Loss - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53960880 chr19:53960882 . . 0 23 hm5C_associated_SNPs_60967 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:53960858-53960895
64251 chr10 43882522 43882522 1 - T A HNSC 43882526 - 43882506 43882546 41 GACCTCAGCTACTGTCTCTCCGGAATGTATGACCACAGATA GACCTCAGCTACTGTCTCTCCGGATTGTATGACCACAGATA < 41bp 0.765350436391368 0.444749090735108 0.8155788 0.78892994 prediction 0.530700872782736 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882526 chr10:43882522 nonsynonymous SNV 0.819 1 25 hm5C_associated_SNPs_60968 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882456-43882580
64251 chr15 99901668 99901668 1 + G T LUSC 99901665 + 99901645 99901685 41 ATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGG ATGATCACGTCCTCCCTCTGCAGTAATTGGCTATGAGAGGG < 41bp 0.902114691041822 0.636767735270859 0.47615618 0.05778262 prediction 0.530693911541926 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99901665 chr15:99901668 stopgain 0.965 1 24 hm5C_associated_SNPs_60970 0 0 3 GRWD1 POSTAR2 ENCODE chr15:99901574-99901722
64251 chr12 68043620 68043620 1 + G T LUAD 68043618 + 68043598 68043638 41 TTCGTCAGCTTCAGGCTTCCCCGGGGCTCGGTGCAGGGGCC TTCGTCAGCTTCAGGCTTCCCCTGGGCTCGGTGCAGGGGCC < 41bp 0.881574256408846 0.616230195035748 0.9080435 0.35327727 prediction 0.530688122746195 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68043618 chr12:68043620 synonymous SNV . 0 23 hm5C_associated_SNPs_60971 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:68043609-68043627
64251 chr19 57931022 57931022 1 + G T UCEC 57931019 + 57930999 57931039 41 TTAGGTTGTTGGCATGGAGCCAAGGATGAGGAGGCACCTTC TTAGGTTGTTGGCATGGAGCCAATGATGAGGAGGCACCTTC < 41bp 0.765318171534527 0.383109680696242 0.621816 0.39617047 prediction 0.530636343069054 Functional Loss - ZNF17 ENSG00000186272;ENSG00000269533 CDS Human other chr19:57931019 chr19:57931022 nonsynonymous SNV 0.230 0 24 hm5C_associated_SNPs_60975 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:57931020-57931038
64251 chr17 21206544 21206544 1 + G T UCEC 21206542 + 21206522 21206562 41 AGCAAGCTGTCGGTGATCCACAGAGGTCAGTGCCCGGCAGC AGCAAGCTGTCGGTGATCCACATAGGTCAGTGCCCGGCAGC < 41bp 0.88597019864759 0.620667335023061 0.895937 0.17492169 prediction 0.530605727249058 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21206542 chr17:21206544 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_60977 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:21206525-21206544
64251 chr7 72413738 72413738 1 + C T UCEC 72413736 + 72413716 72413756 41 GCTGTCTTCTTCGGTGCAGCCACCAGCTCCGGCTTTGGAGC GCTGTCTTCTTCGGTGCAGCCATCAGCTCCGGCTTTGGAGC < 41bp 0.772001705743276 0.506754637138805 0.37057453 0.28633708 prediction 0.530494137208941 Functional Loss - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413736 chr7:72413738 nonsynonymous SNV 0.071 3 23 hm5C_associated_SNPs_60994 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:72413690-72413747
64251 chr8 38884270 38884270 1 + C T rs61753674 38884268 + 38884248 38884288 41 GTCATAATCTTGGAATGAATCACGATGATGGGAGAGATTGT GTCATAATCTTGGAATGAATCATGATGATGGGAGAGATTGT < 41bp 0.811803055957075 0.546558736892375 0.2513063 0.20368972 prediction 0.530488638129401 Functional Loss - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38884268 chr8:38884270 synonymous SNV . 0 23 hm5C_associated_SNPs_60995 1 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:38884260-38884280
64251 chr13 115090279 115090279 1 + G T UCEC 115090276 + 115090256 115090296 41 ACCAGGGCCACCTGGGTCCCCTAGGCCTTGGAAATCCAATC ACCAGGGCCACCTGGGTCCCCTATGCCTTGGAAATCCAATC < 41bp 0.765218883796941 0.388171141433924 0.18490672 0.14811918 prediction 0.530437767593881 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090276 chr13:115090279 nonsynonymous SNV 0.962 3 24 hm5C_associated_SNPs_60996 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr13:115090271-115090311
64251 chr18 47918600 47918600 1 + C T UCEC 47918598 + 47918578 47918618 41 GGTCCGAGGGGGAGGACTTACTCGTTATGTTATAACCTGAG GGTCCGAGGGGGAGGACTTACTTGTTATGTTATAACCTGAG < 41bp 0.778759028108466 0.513543851672593 0.121190846 0.09307897 prediction 0.530430352871746 Functional Loss - SKA1 ENSG00000154839 CDS Human protein_coding chr18:47918598 chr18:47918600 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_60998 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714641 chr18:47918515-47918771
64251 chr14 75201644 75201644 1 + A T rs141595537 75201640 + 75201620 75201660 41 CCCCTCGATTCTAATTCTTACAAGACACAGTTCCTCTGCCT CCCCTCGATTCTAATTCTTACAAGTCACAGTTCCTCTGCCT < 41bp 0.80872934247099 0.543521586941636 0.24165282 0.13091418 prediction 0.530415511058707 Functional Loss - FCF1 ENSG00000119616 UTR3 Human protein_coding chr14:75201640 chr14:75201644 . . 0 25 hm5C_associated_SNPs_60999 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:75201613-75201650
64251 chr10 103587660 103587660 1 - C G BLCA 103587664 - 103587644 103587684 41 GAGGAGGCCCCAAGGGAACACGTGGAGAGCTTCTTCCAGGT GAGGAGGCCCCAAGGGAACACGTGCAGAGCTTCTTCCAGGT < 41bp 0.765207437313487 0.487841377657201 0.58227074 0.3004677 prediction 0.530414874626974 Functional Loss - KCNIP2 ENSG00000120049 CDS Human protein_coding chr10:103587664 chr10:103587660 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_61000 0 0 2 PRPF8 POSTAR2 ENCODE chr10:103587611-103587662
64251 chr5 34929996 34929996 1 + G T UCEC 34929994 + 34929974 34930014 41 AGGAGCTCAAGAAGGCCTATCGGAAGCTGGCCCTGAAATGG AGGAGCTCAAGAAGGCCTATCGTAAGCTGGCCCTGAAATGG < 41bp 0.864466091671693 0.599260181780197 0.89140433 0.5071647 prediction 0.530411819782992 Functional Loss - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929994 chr5:34929996 synonymous SNV . 0 23 hm5C_associated_SNPs_61001 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:34929980-34930000
64251 chr3 45637009 45637009 1 + G T STAD 45637006 + 45636986 45637026 41 GAGTGGGTGGCCTAGCTCCCCGGGGAGTGACCCACCACTGC GAGTGGGTGGCCTAGCTCCCCGGTGAGTGACCCACCACTGC < 41bp 0.908950216415171 0.643772861125171 0.9305091 0.81027234 prediction 0.53035471058 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637006 chr3:45637009 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_61003 0 0 3 FMR1 POSTAR2 ENCODE chr3:45636966-45637019
64251 chr2 102441875 102441875 1 + C T SKCM 102441873 + 102441853 102441893 41 GAAGACTGGATCGCTTACATCTCCAGAGAAATCCTGAGGGT GAAGACTGGATCGCTTACATCTTCAGAGAAATCCTGAGGGT < 41bp 0.765158816925938 0.492398552153662 0.94086576 0.17389154 prediction 0.530317633851875 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102441873 chr2:102441875 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61007 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:102441788-102441878
64251 chr15 78457364 78457364 1 + C T LUSC 78457362 + 78457342 78457382 41 GTGCAGGATTGATCGGAGGTCTCGGTGTGACACCAAGTGGC GTGCAGGATTGATCGGAGGTCTTGGTGTGACACCAAGTGGC < 41bp 0.769242933679679 0.504086424914899 0.85297495 0.71448815 prediction 0.53031301752956 Functional Loss - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78457362 chr15:78457364 synonymous SNV . 0 23 hm5C_associated_SNPs_61008 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr15:78457318-78457375
64251 chr11 73962063 73962063 1 + G T UCEC 73962060 + 73962040 73962080 41 GTCCATGAGGATGCCCCTGACAAGGTGAGTCTGGTGCTCAG GTCCATGAGGATGCCCCTGACAATGTGAGTCTGGTGCTCAG < 41bp 0.765153096192478 0.38611583752594 0.8707285 0.14129713 prediction 0.530306192384956 Functional Loss - PPME1 ENSG00000214517 CDS Human protein_coding chr11:73962060 chr11:73962063 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_61009 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:73962030-73962068
64251 chr4 95539315 95539315 1 + C T UCEC 95539313 + 95539293 95539333 41 ATCCACTGGCGTCATCAAGTCACCAAGCTGGCAACGGCCAA ATCCACTGGCGTCATCAAGTCATCAAGCTGGCAACGGCCAA < 41bp 0.783646580978616 0.518532190349199 0.24362996 0.12307808 prediction 0.530228781258834 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95539313 chr4:95539315 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_61013 0 0 3 GRWD1 POSTAR2 ENCODE chr4:95539261-95539357
64251 chr2 136409574 136409574 1 + A C rs2305165 136409570 + 136409550 136409590 41 TCAGCCAGCCTGTGCTCCAGCAGCAGGGATATATTCAGCAG TCAGCCAGCCTGTGCTCCAGCAGCCGGGATATATTCAGCAG < 41bp 0.765098814283765 0.353186255055474 0.29731137 0.2187883 prediction 0.530197628567529 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136409570 chr2:136409574 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_61019 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:136409563-136409595
64251 chr1 231125922 231125922 1 + G T COAD 231125919 + 231125899 231125939 41 ACCTGAGGTGGTGGCAGCTTCAAGATTCCAACCAGAATACT ACCTGAGGTGGTGGCAGCTTCAATATTCCAACCAGAATACT < 41bp 0.898191206959001 0.633117893683339 0.34358758 0.17879668 prediction 0.530146626551325 Functional Loss - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231125919 chr1:231125922 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_61024 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231125873-231126009
64251 chr19 3186089 3186089 1 + G T OV 3186086 + 3186066 3186106 41 TGAAGGCGTCTTGTCTGCCGCTCGGCTTCATCGTCTTCCTG TGAAGGCGTCTTGTCTGCCGCTCTGCTTCATCGTCTTCCTG < 41bp 0.76505279401199 0.391313582461047 0.05577153 0.024032861 prediction 0.53010558802398 Functional Loss - NCLN ENSG00000125912 CDS Human protein_coding chr19:3186086 chr19:3186089 nonsynonymous SNV 0.948 1 24 hm5C_associated_SNPs_61028 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:3186074-3186095
64251 chr2 239342304 239342304 1 + C T HNSC 239342302 + 239342282 239342322 41 ACGTCGGGGACCTCCAGACCCTCAGGAGCCTATTGCAAGAG ACGTCGGGGACCTCCAGACCCTTAGGAGCCTATTGCAAGAG < 41bp 0.765045703136844 0.499969448142958 0.24385083 0.2904423 prediction 0.530091406273688 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239342302 chr2:239342304 synonymous SNV . 0 23 hm5C_associated_SNPs_61029 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:239342279-239342317
64251 chr12 54396247 54396247 1 + C T CESC 54396245 + 54396225 54396265 41 GCCAACTGGATTCACGCCCGCTCCACGAGGAAGAAGCGCTG GCCAACTGGATTCACGCCCGCTTCACGAGGAAGAAGCGCTG < 41bp 0.779871225450488 0.5148496620833 0.27294803 0.048054636 prediction 0.530043126734376 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54396245 chr12:54396247 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_61033 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:54396229-54396255
64251 chr10 1151180 1151180 1 + C T UCEC 1151178 + 1151158 1151198 41 TTCAGGGACCCCTCCATCCACTCGGTGAATGTTTTCCAGGG TTCAGGGACCCCTCCATCCACTTGGTGAATGTTTTCCAGGG < 41bp 0.771066467201362 0.506055721952472 0.54700655 0.6125531 prediction 0.530021490497779 Functional Loss - WDR37 ENSG00000047056 CDS Human protein_coding chr10:1151178 chr10:1151180 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_61034 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:1151158-1151184
64251 chrX 118604355 118604355 1 + G T CESC 118604352 + 118604332 118604372 41 CCAGGAATGCTTCCGGATCCCAAGAACACTCACATCGTCAT CCAGGAATGCTTCCGGATCCCAATAACACTCACATCGTCAT < 41bp 0.90410638458401 0.639100528310414 0.32038528 0.13566154 prediction 0.530011712547192 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118604352 chrX:118604355 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_61035 0 0 43 TARDBP POSTAR2 DRA001158,DRS012387 chrX:118604337-118604379
64251 chr1 200017918 200017918 1 + G T UCEC 200017916 + 200017896 200017936 41 TTCTCCATTGTCGAGTGGGCCAGGAGTAGTATCTTCTTCAG TTCTCCATTGTCGAGTGGGCCATGAGTAGTATCTTCTTCAG < 41bp 0.868182675389739 0.603179859928474 0.80337596 0.049378425 prediction 0.53000563092253 Functional Loss - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200017916 chr1:200017918 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61036 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:200017877-200017943
64251 chr7 99045873 99045873 1 + A T KIRC 99045869 + 99045849 99045889 41 AGTATGACATGACCAAGATGCCCGAGTGCTACTTCTACTCC AGTATGACATGACCAAGATGCCCGTGTGCTACTTCTACTCC < 41bp 0.765000299706331 0.43350588848084 0.35227674 0.21525642 prediction 0.530000599412663 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99045869 chr7:99045873 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_61037 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99045829-99045881
64251 chr21 15399913 15399913 1 + G T UCEC 15399910 + 15399890 15399930 41 CTCCAGGACACCCCTGAAGCCGAGAAATGGTGAGTGTGGGG CTCCAGGACACCCCTGAAGCCGATAAATGGTGAGTGTGGGG < 41bp 0.764989572008762 0.400005040058102 0.28337544 0.119894505 prediction 0.529979144017524 Functional Loss - ANKRD20A11P;LIPI ENSG00000224905 ncRNA_exonic Human antisense chr21:15399910 chr21:15399913 . . 0 24 hm5C_associated_SNPs_61038 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr21:15399905-15399946
64251 chr16 21964713 21964713 1 + G T rs201397873 21964711 + 21964691 21964731 41 CATCTTGCTTTCCTTTAATCCGGCAGTGACCGTGTGTCAGA CATCTTGCTTTCCTTTAATCCGTCAGTGACCGTGTGTCAGA < 41bp 0.843670059395996 0.578703578431188 0.30844074 0.07223442 prediction 0.529932961929614 Functional Loss - UQCRC2 ENSG00000140740 UTR5 Human protein_coding chr16:21964711 chr16:21964713 . . 0 23 hm5C_associated_SNPs_61040 1 0 27 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:21964684-21964723
64251 chr19 49378083 49378083 1 + G T LUAD 49378081 + 49378061 49378101 41 CTCCTAGGCTGCCCCTCCGACTGCAAAGGCGGCTCAAGCGC CTCCTAGGCTGCCCCTCCGACTTCAAAGGCGGCTCAAGCGC < 41bp 0.861035759526375 0.596077958693809 0.5299194 0.6663187 prediction 0.529915601665134 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49378081 chr19:49378083 synonymous SNV . 0 23 hm5C_associated_SNPs_61043 0 0 5 LARP7 POSTAR2 ENCODE chr19:49378024-49378087
64251 chr6 21595012 21595012 1 + G C UCEC 21595011 + 21594991 21595031 41 AAGATCATGGAGCAGTCGCCCGACATGCACAACGCCGAGAT AAGATCATGGAGCAGTCGCCCCACATGCACAACGCCGAGAT < 41bp 0.764957595310835 0.482048663281852 0.34388614 0.12929821 prediction 0.529915190621669 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21595011 chr6:21595012 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_61044 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:21594920-21595030
64251 chr5 14693114 14693114 1 + A T LUSC 14693110 + 14693090 14693130 41 CGCTCATTGCTGAGGACGATCGGCACTATAACATCCCCGTC CGCTCATTGCTGAGGACGATCGGCTCTATAACATCCCCGTC < 41bp 0.826578859365732 0.561631320806543 0.22885922 0.22380087 prediction 0.529895077118379 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14693110 chr5:14693114 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_61046 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:14693102-14693132
64251 chr19 17291808 17291808 1 + C T HNSC 17291806 + 17291786 17291826 41 GCGAGGACCCCCGTAGCCTTCTCCAGTCCCTCAGTCGGCTC GCGAGGACCCCCGTAGCCTTCTTCAGTCCCTCAGTCGGCTC < 41bp 0.803655865101225 0.538717375483316 0.9314395 0.14762974 prediction 0.52987697923582 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17291806 chr19:17291808 synonymous SNV . 0 23 hm5C_associated_SNPs_61048 0 0 6 GRWD1 POSTAR2 ENCODE chr19:17291798-17291848
64251 chr11 65305782 65305782 1 + C T UCEC 65305780 + 65305760 65305800 41 GTGAGGACAACTGGGAGGGCCTCGAGACTGACAGTCGTAAG GTGAGGACAACTGGGAGGGCCTTGAGACTGACAGTCGTAAG < 41bp 0.764934948991441 0.494566927569732 0.7488265 0.26770437 prediction 0.529869897982882 Functional Loss - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65305780 chr11:65305782 nonsynonymous SNV 0.375 0 23 hm5C_associated_SNPs_61050 0 0 5 DDX55 POSTAR2 ENCODE chr11:65305742-65305783
64251 chr11 43511894 43511894 1 + C T COAD 43511892 + 43511872 43511912 41 CCGCCAGGCTCTGCACTATGCGCCACACCAGATGAAGGTGA CCGCCAGGCTCTGCACTATGCGTCACACCAGATGAAGGTGA < 41bp 0.764925637397725 0.48328143404926 0.14636138 0.20854262 prediction 0.529851274795449 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43511892 chr11:43511894 nonsynonymous SNV 0.820 3 23 hm5C_associated_SNPs_61051 0 0 1 PRPF8 POSTAR2 ENCODE chr11:43511882-43511936
64251 chr16 81398616 81398616 1 + C T UCEC 81398614 + 81398594 81398634 41 GCTATGAAAAAGAAAATCTACGCCATGGGTGGAGGCTCCTA GCTATGAAAAAGAAAATCTACGTCATGGGTGGAGGCTCCTA < 41bp 0.820565167842313 0.555640358644785 0.090577036 0.06191331 prediction 0.529849618395056 Functional Loss - GAN ENSG00000261609 CDS Human protein_coding chr16:81398614 chr16:81398616 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_61052 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:81398608-81398638
64251 chr17 40761698 40761698 1 + G T rs373127947 40761695 + 40761675 40761715 41 CGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGT CGCCTGCGTCTTGCGGCGAGCGGTCTGGCGTGCGGCGCCGT < 41bp 0.764917539046864 0.48220616352286 0.91314566 0.79528797 prediction 0.529835078093728 Functional Loss - TUBG1 ENSG00000131462;ENSG00000141699 UTR5 Human other chr17:40761695 chr17:40761698 . . 0 24 hm5C_associated_SNPs_61054 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:40761698-40761699
64251 chr19 5131990 5131990 1 + G C rs73529623 5131986 + 5131966 5132006 41 GCCCACCCGGTCCCCACTGTCGGTGGTGAAGCAGGAGGCCT GCCCACCCGGTCCCCACTGTCGGTCGTGAAGCAGGAGGCCT < 41bp 0.783949936566859 0.519065662228537 0.90114033 0.7425764 prediction 0.529768548676645 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5131986 chr19:5131990 synonymous SNV . 0 25 hm5C_associated_SNPs_61061 0 0 3 GRWD1 POSTAR2 ENCODE chr19:5131925-5131993
64251 chr3 183882952 183882952 1 + C T LUSC 183882950 + 183882930 183882970 41 CCTCACGCCTGATGAGAAGACACAAGCGGCGGCGGCGGAAG CCTCACGCCTGATGAGAAGACATAAGCGGCGGCGGCGGAAG < 41bp 0.781140353849817 0.51625820388775 0.18761837 0.18989456 prediction 0.529764299924133 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882950 chr3:183882952 synonymous SNV . 0 23 hm5C_associated_SNPs_61064 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:183882945-183882989
64251 chr6 27778110 27778110 1 + A T LUSC 27778106 + 27778086 27778126 41 TTCAAGACCGACTTGCGCTTCCAGAGCTCCGCGGTGATGGC TTCAAGACCGACTTGCGCTTCCAGTGCTCCGCGGTGATGGC < 41bp 0.764876467610969 0.454718783909621 0.8507168 0.43877542 prediction 0.529752935221937 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27778106 chr6:27778110 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_61066 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr13 34403987 34403987 1 + G T UCEC 34403985 + 34403965 34404005 41 TGACTCAGTGGTATTATTGACAGAAGTTGACAAACTCACCA TGACTCAGTGGTATTATTGACATAAGTTGACAAACTCACCA < 41bp 0.764873758508547 0.442605019903632 0.4702912 0.14762557 prediction 0.529747517017093 Functional Loss - RFC3 ENSG00000133119 CDS Human protein_coding chr13:34403985 chr13:34403987 stopgain 0.999 1 23 hm5C_associated_SNPs_61067 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:34403970-34404038
64251 chr10 35626047 35626047 1 + G T SARC 35626045 + 35626025 35626065 41 TCCGGAGGAATGCCCACTCCCGGCTGGAGTCCTACCGGCCA TCCGGAGGAATGCCCACTCCCGTCTGGAGTCCTACCGGCCA < 41bp 0.764830788945661 0.47033651414185 0.89873827 0.41268802 prediction 0.529661577891323 Functional Loss - CCNY ENSG00000108100 CDS Human protein_coding chr10:35626045 chr10:35626047 synonymous SNV . 0 23 hm5C_associated_SNPs_61069 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:35626021-35626051
64251 chr19 7591725 7591725 1 + G T LUAD 7591723 + 7591703 7591743 41 TGACCCTTGGACCAATGGCTCAGGGCTTGCTCTCTGCCAGC TGACCCTTGGACCAATGGCTCATGGCTTGCTCTCTGCCAGC < 41bp 0.886823616846296 0.622003458524919 0.9422531 0.717356 prediction 0.529640316642755 Functional Loss - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7591723 chr19:7591725 nonsynonymous SNV 0.026 2 23 hm5C_associated_SNPs_61071 0 0 1 SND1 POSTAR2 ENCODE chr19:7591666-7591791
64251 chr9 34250662 34250662 1 + G T LGG 34250659 + 34250639 34250679 41 CTTGTTTCTTTTCTTAGATTCTCGACTATCTCTTTGCACAT CTTGTTTCTTTTCTTAGATTCTCTACTATCTCTTTGCACAT < 41bp 0.764817375304023 0.389760199468788 0.55634844 0.90544784 prediction 0.529634750608047 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34250659 chr9:34250662 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_61072 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:34250653-34250687
64251 chr19 13873196 13873196 1 + C T SKCM 13873194 + 13873174 13873214 41 GCCTGACCATCCCGCTGGTGCCCGAGACGGAAGATGACCGC GCCTGACCATCCCGCTGGTGCCTGAGACGGAAGATGACCGC < 41bp 0.764816934663675 0.496134410368635 0.23246819 0.41808227 prediction 0.52963386932735 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13873194 chr19:13873196 synonymous SNV . 0 23 hm5C_associated_SNPs_61073 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13873178-13873209
64251 chr11 61897307 61897307 1 + G T UCEC 61897305 + 61897285 61897325 41 CTGAGCTCCCGACGCCTCCGCAGCAAGGACAGTGTAGAGAA CTGAGCTCCCGACGCCTCCGCATCAAGGACAGTGTAGAGAA < 41bp 0.764815855008411 0.420334516734269 0.1590673 0.10649645 prediction 0.529631710016822 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897305 chr11:61897307 nonsynonymous SNV 0.919 3 23 hm5C_associated_SNPs_61074 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr19 55857972 55857972 1 + G C BLCA 55857968 + 55857948 55857988 41 AGACCAAGCGGCGGCTGCAGCAAGGCCTGGACAGTGGCAGC AGACCAAGCGGCGGCTGCAGCAAGCCCTGGACAGTGGCAGC < 41bp 0.764814197934328 0.485447495338729 0.8941314 0.8336001 prediction 0.529628395868655 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857968 chr19:55857972 nonsynonymous SNV 0.824 1 25 hm5C_associated_SNPs_61075 0 0 3 BUD13 POSTAR2 ENCODE chr19:55857867-55857972
64251 chr3 47361241 47361241 1 + G T STAD 47361239 + 47361219 47361259 41 ATGACATGATGGAGTGCAAGCAGGATGAGATTGTAATGCAA ATGACATGATGGAGTGCAAGCATGATGAGATTGTAATGCAA < 41bp 0.764801338829602 0.428974671357733 0.7075602 0.09421739 prediction 0.529602677659205 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361239 chr3:47361241 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_61077 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:47361217-47361246
64251 chr6 33373371 33373371 1 + C T SKCM 33373369 + 33373349 33373389 41 GGGAGTGAGGAGCTCACTGTCACCAATGCTCGATATGTCCC GGGAGTGAGGAGCTCACTGTCATCAATGCTCGATATGTCCC < 41bp 0.793733562653933 0.528955715101786 0.2328685 0.15329939 prediction 0.529555695104294 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33373369 chr6:33373371 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_61079 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221665 chr6:33373360-33373380
64251 chrX 118374394 118374394 1 + G T LUSC 118374391 + 118374371 118374411 41 CTGACCTCACTGCTGCCCAGCAGGAGACTCTGAGTGACTGG CTGACCTCACTGCTGCCCAGCAGTAGACTCTGAGTGACTGG < 41bp 0.764734728669059 0.378195976366181 0.7764339 0.2903043 prediction 0.529469457338118 Functional Loss - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118374391 chrX:118374394 stopgain 0.947 1 24 hm5C_associated_SNPs_61084 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:118374323-118374403
64251 chr9 35607349 35607349 1 + G C LUAD 35607348 + 35607328 35607368 41 GTCTAGTCCGACGGGAAGATCGAGGCTTCACCGCTGTCGTG GTCTAGTCCGACGGGAAGATCCAGGCTTCACCGCTGTCGTG < 41bp 0.764727562765572 0.453632507367145 0.93633157 0.92210305 prediction 0.529455125531143 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35607348 chr9:35607349 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_61086 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:35607312-35607351
64251 chr6 46111108 46111108 1 + A T SARC 46111104 + 46111084 46111124 41 CACAAAGGCTACAAGCATAGCACAATTAACATTGTGGATAT CACAAAGGCTACAAGCATAGCACATTTAACATTGTGGATAT < 41bp 0.764717919956892 0.45909246339931 0.020688564 0.036000162 prediction 0.529435839913784 Functional Loss - ENPP4 ENSG00000001561 CDS Human protein_coding chr6:46111104 chr6:46111108 nonsynonymous SNV 0.993 1 25 hm5C_associated_SNPs_61087 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:46111100-46111120
64251 chr20 32251484 32251484 1 + G T BLCA 32251482 + 32251462 32251502 41 GCGAAGGTAGCGAGCGCGAGCCGAGGATGCCGGTACTGCTG GCGAAGGTAGCGAGCGCGAGCCTAGGATGCCGGTACTGCTG < 41bp 0.764716710428104 0.423291430397695 0.88317937 0.75505626 prediction 0.529433420856207 Functional Loss - C20orf144 ENSG00000149609 CDS Human protein_coding chr20:32251482 chr20:32251484 synonymous SNV . 0 23 hm5C_associated_SNPs_61088 0 0 1 HNRNPD POSTAR2 GSE52971,GSM1279666 chr20:32251482-32251498
64251 chr19 47706943 47706943 1 + G T LUAD 47706940 + 47706920 47706960 41 TCTTTTAGGTACTGCTTCTCCGAGATGGCCCCAGTGTGTGC TCTTTTAGGTACTGCTTCTCCGATATGGCCCCAGTGTGTGC < 41bp 0.903825039286958 0.639109986966451 0.64002526 0.047578424 prediction 0.529430104641014 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47706940 chr19:47706943 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_61089 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:47706925-47706951
64251 chr22 41609982 41609982 1 + G T UCEC 41609979 + 41609959 41609999 41 TTCTGCAGCGTCTCCTGCTCCAGGAGCTACTCCTCCAACTC TTCTGCAGCGTCTCCTGCTCCAGTAGCTACTCCTCCAACTC < 41bp 0.90912931565573 0.644429631585649 0.71062213 0.03336537 prediction 0.529399368140163 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41609979 chr22:41609982 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61094 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:41609975-41610003
64251 chr17 32583280 32583280 1 + C T SKCM 32583278 + 32583258 32583298 41 GTCACCTGCTGTTATAACTTCACCAATAGGAAGATCTCAGT GTCACCTGCTGTTATAACTTCATCAATAGGAAGATCTCAGT < 41bp 0.764694541528381 0.489545946583616 0.035272002 0.019984633 prediction 0.529389083056762 Functional Loss - CCL2 ENSG00000108691 CDS Human protein_coding chr17:32583278 chr17:32583280 nonsynonymous SNV 0.041 0 23 hm5C_associated_SNPs_61095 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:32583261-32583282
64251 chr10 54076460 54076460 1 + G T BLCA 54076457 + 54076437 54076477 41 GGAGAAAAGGCTCTCATGGACTAGAAATATTCCAGCGTTGT GGAGAAAAGGCTCTCATGGACTATAAATATTCCAGCGTTGT < 41bp 0.76468730430585 0.391952596645794 0.080758005 0.06529209 prediction 0.5293746086117 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54076457 chr10:54076460 stopgain 1.000 1 24 hm5C_associated_SNPs_61098 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54076320-54077260
64251 chr3 38565576 38565576 1 + G T rs1141223 38565573 + 38565553 38565593 41 CCAGGACCTAGAGAAGTTGTCAGGACTGGTGTTTTTTCCTC CCAGGACCTAGAGAAGTTGTCAGTACTGGTGTTTTTTCCTC < 41bp 0.896202754106857 0.631534380758203 0.89970773 0.13215268 prediction 0.529336746697308 Functional Loss - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565573 chr3:38565576 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_61103 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38565534-38565655
64251 chr1 214488167 214488167 1 + G T LUAD 214488164 + 214488144 214488184 41 ATGGTTGTTTTTGGGGAAAACTGGAATCCCTCGGAGACTGT ATGGTTGTTTTTGGGGAAAACTGTAATCCCTCGGAGACTGT < 41bp 0.89292220618776 0.628256722760544 0.89185834 0.3256753 prediction 0.529330966854433 Functional Loss - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214488164 chr1:214488167 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61104 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214488162-214488200
64251 chr1 28858744 28858744 1 + C T STAD 28858742 + 28858722 28858762 41 AGGGACACATCAGTGGAGGGCTCGGAGATGGTCCCTGGGAA AGGGACACATCAGTGGAGGGCTTGGAGATGGTCCCTGGGAA < 41bp 0.776285293391993 0.511621111350836 0.24415872 0.28155595 prediction 0.529328364082313 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28858742 chr1:28858744 nonsynonymous SNV 0.930 4 23 hm5C_associated_SNPs_61106 0 0 23 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:28858683-28858751
64251 chr12 119583368 119583368 1 + G T COAD 119583365 + 119583345 119583385 41 AGCCCCAGTGGGGGCTTGAGCAAGAGCCGGGAGCTCAACAG AGCCCCAGTGGGGGCTTGAGCAATAGCCGGGAGCTCAACAG < 41bp 0.913860492173016 0.649197026863418 0.9331422 0.90943515 prediction 0.529326930619196 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119583365 chr12:119583368 nonsynonymous SNV 0.932 1 24 hm5C_associated_SNPs_61108 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119583360-119583460
64251 chr17 48541605 48541605 1 + C T SKCM 48541603 + 48541583 48541623 41 CATTGCTGGGTCCCCTGCACCTCCAGAGTTGATCCGAGCCA CATTGCTGGGTCCCCTGCACCTTCAGAGTTGATCCGAGCCA < 41bp 0.833745127220539 0.569087417888426 0.9455066 0.124914944 prediction 0.529315418664225 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48541603 chr17:48541605 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_61112 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:48541581-48541609
64251 chr3 100058674 100058674 1 + C T HNSC 100058672 + 100058652 100058692 41 TTTCTAGGAATGCTTTAATTCTCCATATGGAGCGAAATATT TTTCTAGGAATGCTTTAATTCTTCATATGGAGCGAAATATT < 41bp 0.764647472621108 0.474038983463046 0.92877513 0.2229684 prediction 0.529294945242217 Functional Loss - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100058672 chr3:100058674 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_61114 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:100058661-100058686
64251 chr3 127339608 127339608 1 + C T KICH 127339606 + 127339586 127339626 41 ATCCGCATGGCGGAGGCCCACGCGCGCATCCATCTGCGGGA ATCCGCATGGCGGAGGCCCACGTGCGCATCCATCTGCGGGA < 41bp 0.769515922787706 0.504876979560609 0.8825756 0.6703819 prediction 0.529277886454194 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127339606 chr3:127339608 nonsynonymous SNV 0.440 2 23 hm5C_associated_SNPs_61116 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:127339600-127339620
64251 chr6 26045675 26045675 1 + G T CESC 26045673 + 26045653 26045693 41 GCAAACAGCTCGCAAGTCTACCGGCGGCAAAGCTCCGCGCA GCAAACAGCTCGCAAGTCTACCTGCGGCAAAGCTCCGCGCA < 41bp 0.764635995623746 0.427156604866085 0.65844965 0.13139483 prediction 0.529271991247492 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045673 chr6:26045675 nonsynonymous SNV 0.617 0 23 hm5C_associated_SNPs_61117 0 0 3 DDX3X POSTAR2 ENCODE chr6:26045660-26045694
64251 chr7 16705117 16705117 1 + C T OV 16705115 + 16705095 16705135 41 AACAGGCCAGCGGTTCAAAACTCGGAAAAGGGGTAGGTTGT AACAGGCCAGCGGTTCAAAACTTGGAAAAGGGGTAGGTTGT < 41bp 0.785455154619437 0.520819693139306 0.09821886 0.06540117 prediction 0.529270922960261 Functional Loss - BZW2 ENSG00000136261 CDS Human protein_coding chr7:16705115 chr7:16705117 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_61118 0 0 3 FXR2 POSTAR2 ENCODE chr7:16705069-16705121
64251 chr12 6630171 6630171 1 + C T ESCA 6630169 + 6630149 6630189 41 CAGAAAGGCCATCATTCTCACTCGAGAAGCCACAGGCCACT CAGAAAGGCCATCATTCTCACTTGAGAAGCCACAGGCCACT < 41bp 0.802572477540613 0.537957313311062 0.61991936 0.31922638 prediction 0.529230328459102 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6630169 chr12:6630171 stopgain 0.867 0 23 hm5C_associated_SNPs_61119 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6630153-6630181
64251 chr6 27100932 27100932 1 + G T HNSC 27100930 + 27100910 27100950 41 TAGGGCCGGTCTCCAGTTCCCCGTGGGCCGAGTGCACCGCC TAGGGCCGGTCTCCAGTTCCCCTTGGGCCGAGTGCACCGCC < 41bp 0.764612773048327 0.421283861515231 0.10534996 0.017739087 prediction 0.529225546096653 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100930 chr6:27100932 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_61121 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27100820-27100940
64251 chr20 47679815 47679815 1 + G T UCEC 47679813 + 47679793 47679833 41 TGACATTACTGGAGAAGTCCCAGGATAATGTTATCAAAGTA TGACATTACTGGAGAAGTCCCATGATAATGTTATCAAAGTA < 41bp 0.764610589527753 0.455340826113364 0.6618692 0.20212796 prediction 0.529221179055505 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47679813 chr20:47679815 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_61122 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47679741-47679881
64251 chr1 31194360 31194360 1 + G T LUAD 31194357 + 31194337 31194377 41 ATGGTGCCTGTGGACAGCGGCTGGATACGGCGCACAGCCTG ATGGTGCCTGTGGACAGCGGCTGTATACGGCGCACAGCCTG < 41bp 0.900857084984054 0.636251770246644 0.50517017 0.16315031 prediction 0.529210629474821 Functional Loss - MATN1 ENSG00000162510 CDS Human protein_coding chr1:31194357 chr1:31194360 synonymous SNV . 0 24 hm5C_associated_SNPs_61124 0 0 1 RBM15 POSTAR2 ENCODE chr1:31194290-31194367
64251 chr3 9985140 9985140 1 + G T SARC 9985138 + 9985118 9985158 41 AACACCGAGGGCGGTTATCGCTGCATCTGTGCCGAGGGCTA AACACCGAGGGCGGTTATCGCTTCATCTGTGCCGAGGGCTA < 41bp 0.862341631893291 0.597744355744235 0.31777674 0.21621025 prediction 0.529194552298112 Functional Loss - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9985138 chr3:9985140 nonsynonymous SNV 0.672 5 23 hm5C_associated_SNPs_61127 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr3:9985131-9985156
64251 chr11 47587435 47587435 1 + G T TGCT 47587433 + 47587413 47587453 41 TGGGGTCTCCACCGTCTTTGCTGAGCCACCTCTTTGCCTCG TGGGGTCTCCACCGTCTTTGCTTAGCCACCTCTTTGCCTCG < 41bp 0.764563821150249 0.411614320629376 0.8603724 0.3165416 prediction 0.529127642300499 Functional Loss - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47587433 chr11:47587435 synonymous SNV . 0 23 hm5C_associated_SNPs_61133 0 0 1 BUD13 POSTAR2 ENCODE chr11:47587339-47587633
64251 chr9 19049890 19049890 1 + G C BLCA 19049889 + 19049869 19049909 41 AAAATTACTTCACCAGCCAGCGAGACAATATCTTCCGTAAC AAAATTACTTCACCAGCCAGCCAGACAATATCTTCCGTAAC < 41bp 0.764556047383401 0.467121587701752 0.40484375 0.029961705 prediction 0.529112094766801 Functional Loss - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19049889 chr9:19049890 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_61136 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:19049860-19049940
64251 chr1 210001421 210001421 1 + G T MESO 210001418 + 210001398 210001438 41 ACGTTTTCGCTATGGGCAAACGCGGGAGCCGGAGCCAGAGC ACGTTTTCGCTATGGGCAAACGCTGGAGCCGGAGCCAGAGC < 41bp 0.764554188222653 0.389592637011562 0.9035915 0.31552088 prediction 0.529108376445306 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210001418 chr1:210001421 nonsynonymous SNV 0.534 2 24 hm5C_associated_SNPs_61137 0 0 1 NCBP2 POSTAR2 ENCODE chr1:210001370-210001463
64251 chrX 54841738 54841738 1 + G T LUAD 54841736 + 54841716 54841756 41 GTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCTG GTACCGAGAGGCGATGGAAGCGTATTTGAAGGCTGCAGCTG < 41bp 0.878473314594983 0.613961079766162 0.8708308 0.39101708 prediction 0.529024469657642 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841736 chrX:54841738 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_61143 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:54841737-54841738
64251 chr11 65046351 65046351 1 + G C LUSC 65046347 + 65046327 65046367 41 GGGATGTCCAGAGGCACTAACTGGGAGCTACAAATCCATGT GGGATGTCCAGAGGCACTAACTGGCAGCTACAAATCCATGT < 41bp 0.81754175902287 0.553032234728507 0.83423007 0.785895 prediction 0.529019048588725 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65046347 chr11:65046351 synonymous SNV . 0 25 hm5C_associated_SNPs_61144 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65046323-65046372
64251 chr7 99689352 99689352 1 + G T GBM 99689349 + 99689329 99689369 41 ACCATGAACCAGTTTGTGAACAAGTTCAATGTCCTCTACGA ACCATGAACCAGTTTGTGAACAATTTCAATGTCCTCTACGA < 41bp 0.764505930206044 0.381181075039263 0.36035332 0.13920262 prediction 0.529011860412087 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99689349 chr7:99689352 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61146 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99689317-99689385
64251 chr16 83999318 83999318 1 + C T rs149907599 83999316 + 83999296 83999336 41 GCCAGGCCGTGTTCCAGGACCTCGAGGGTGTCGAGAAGGTG GCCAGGCCGTGTTCCAGGACCTTGAGGGTGTCGAGAAGGTG < 41bp 0.77132472232063 0.506843683689492 0.50323594 0.30653286 prediction 0.528962077262275 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83999316 chr16:83999318 synonymous SNV . 0 23 hm5C_associated_SNPs_61152 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:83999292-83999318
64251 chr8 21955777 21955777 1 + G C UCEC 21955773 + 21955753 21955793 41 GAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTAC GAGGAGCTGGACGGTGGGACCACACAGAGCAACCTGATTAC < 41bp 0.764472814475565 0.475399358614112 0.19516516 0.074929625 prediction 0.528945628951131 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21955773 chr8:21955777 nonsynonymous SNV 0.470 0 25 hm5C_associated_SNPs_61154 0 0 2 PPIG POSTAR2 ENCODE chr8:21955745-21955780
64251 chr7 89856794 89856794 1 + C T GBM 89856792 + 89856772 89856812 41 GGTCAGAGAGATATTTGTTTCTCAACATGGCTTATCAGCAG GGTCAGAGAGATATTTGTTTCTTAACATGGCTTATCAGCAG < 41bp 0.764461908096777 0.49362192390586 0.7891158 0.27529776 prediction 0.528923816193555 Functional Loss - STEAP2 ENSG00000157214 CDS Human protein_coding chr7:89856792 chr7:89856794 synonymous SNV . 0 23 hm5C_associated_SNPs_61157 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr7:89856775-89856805
64251 chr20 62655977 62655977 1 + G T COAD 62655974 + 62655954 62655994 41 AAAGCAGAGGTGCTGTGGCTCATGGGCGCCAAGTCCAAGTG AAAGCAGAGGTGCTGTGGCTCATTGGCGCCAAGTCCAAGTG < 41bp 0.764457826519714 0.365724337739967 0.77196956 0.22727624 prediction 0.528915653039428 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62655974 chr20:62655977 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_61158 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr20:62655960-62655981
64251 chr7 133749104 133749104 1 + G T LUAD 133749102 + 133749082 133749122 41 TCCTGAACCTGGTGGTGGACCAGGGTGTGAAGTACACGGAG TCCTGAACCTGGTGGTGGACCATGGTGTGAAGTACACGGAG < 41bp 0.779622956477013 0.515197435131577 0.8878456 0.37892812 prediction 0.528851042690873 Functional Loss - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133749102 chr7:133749104 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_61166 0 0 1 FMR1 POSTAR2 ENCODE chr7:133749083-133749250
64251 chr20 62587751 62587751 1 - C A STAD 62587753 - 62587733 62587773 41 GCCCATGCGCGCCGCCCGGCCAGGCCCGCAAAGAGGCCTCC GCCCATGCGCGCCGCCCGGCCATGCCCGCAAAGAGGCCTCC < 41bp 0.874503978677529 0.610085364733862 0.57673854 0.25959742 prediction 0.528837227887334 Functional Loss - UCKL1-AS1 ENSG00000198276 UTR5 Human protein_coding chr20:62587753 chr20:62587751 . . 0 23 hm5C_associated_SNPs_61168 0 0 2 DDX3X POSTAR2 ENCODE chr20:62587612-62587751
64251 chr1 214503600 214503600 1 + G T GBM 214503598 + 214503578 214503618 41 ATTTCTTTACCTGTGAGTGCCAGGAGTGTACCACCAAGGAC ATTTCTTTACCTGTGAGTGCCATGAGTGTACCACCAAGGAC < 41bp 0.856545185264365 0.592150701410627 0.89650965 0.38922572 prediction 0.528788967707476 Functional Loss - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214503598 chr1:214503600 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_61172 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:214503585-214503615
64251 chr3 119236139 119236139 1 + C T SKCM 119236137 + 119236117 119236157 41 AACAGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAA AACAGAAGGATCGAAAGGCACTTCATGAGCTAAAACTGGAA < 41bp 0.81717532871816 0.552783424086008 0.9250574 0.12436974 prediction 0.528783809264304 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119236137 chr3:119236139 synonymous SNV . 0 23 hm5C_associated_SNPs_61173 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:119236072-119236147
64251 chr19 7975657 7975657 1 + C T SARC 7975655 + 7975635 7975675 41 AAGCGGATGCAGGGCCCCATCCCCGAGCGCATTCTGGGCAA AAGCGGATGCAGGGCCCCATCCTCGAGCGCATTCTGGGCAA < 41bp 0.764377651916524 0.491592375275341 0.333399 0.14363867 prediction 0.528755303833048 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975655 chr19:7975657 nonsynonymous SNV 0.934 4 23 hm5C_associated_SNPs_61175 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:7975643-7975664
64251 chr1 174973881 174973881 1 + G T GBM 174973879 + 174973859 174973899 41 ACAAGATGCAACAGAAATCACAGAAGAAAGCAGAACTTCTT ACAAGATGCAACAGAAATCACATAAGAAAGCAGAACTTCTT < 41bp 0.764373765464333 0.441245644615843 0.30055296 0.1393049 prediction 0.528747530928666 Functional Loss - CACYBP ENSG00000116161 CDS Human protein_coding chr1:174973879 chr1:174973881 nonsynonymous SNV 0.980 3 23 hm5C_associated_SNPs_61177 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:174973785-174973899
64251 chr17 74383637 74383637 1 + G T rs3744039 74383635 + 74383615 74383655 41 CCCCGCCCAGCTGGAAGCCCCAGCAGATGCCACCGCCAGAA CCCCGCCCAGCTGGAAGCCCCATCAGATGCCACCGCCAGAA < 41bp 0.861106545527581 0.596735073375756 0.33233052 0.19576779 prediction 0.528742944303651 Functional Loss - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383635 chr17:74383637 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_61178 0 0 2 DDX55 POSTAR2 ENCODE chr17:74383583-74383637
64251 chr11 2417894 2417894 1 + G C SARC 2417890 + 2417870 2417910 41 CAGAAGATCGATGACCTCTTCTCCGGGAAGCTGTACCTCAT CAGAAGATCGATGACCTCTTCTCCCGGAAGCTGTACCTCAT < 41bp 0.764367083191654 0.49601204485497 0.3723849 0.41581553 prediction 0.528734166383309 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2417890 chr11:2417894 nonsynonymous SNV 0.932 3 25 hm5C_associated_SNPs_61179 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:2417855-2417907
64251 chr1 26156121 26156121 1 + G T COAD 26156118 + 26156098 26156138 41 TTTGTCATTAGTGACATCACCGAGGAGACAGAGGTGGAGGT TTTGTCATTAGTGACATCACCGATGAGACAGAGGTGGAGGT < 41bp 0.764364432082716 0.374094507570342 0.39326802 0.10442108 prediction 0.528728864165432 Functional Loss - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26156118 chr1:26156121 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_61181 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:26156110-26156143
64251 chr3 129195555 129195555 1 + G T ESCA 129195553 + 129195533 129195573 41 TCCTTCTACCAGCTTATTTTCAGCACAGTCCATGGGCTTTA TCCTTCTACCAGCTTATTTTCATCACAGTCCATGGGCTTTA < 41bp 0.844982495452514 0.580622200150139 0.77678806 0.21146092 prediction 0.528720590604751 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129195553 chr3:129195555 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_61182 0 0 2 BUD13 POSTAR2 ENCODE chr3:129195485-129195578
64251 chr19 47858447 47858447 1 + T C rs146308315 47858446 + 47858426 47858466 41 ATGAAGTCCATGAGCGGCATCTCCACAACGATTTCCTCCTG ATGAAGTCCATGAGCGGCATCCCCACAACGATTTCCTCCTG < 41bp 0.774321499260255 0.509961770426333 0.92480826 0.022019833 prediction 0.528719457667843 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858446 chr19:47858447 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_61183 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:47858407-47858455
64251 chr19 53086946 53086946 1 + G T rs190191374 53086943 + 53086923 53086963 41 CCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGT CCAACATACTGGAATTCACACTGTAAAGGAACTGTACAAGT < 41bp 0.764349060959066 0.396824357512328 0.319099 0.12969378 prediction 0.528698121918133 Functional Loss - ZNF701 ENSG00000268886 ncRNA_intronic Human antisense chr19:53086943 chr19:53086946 . . 0 24 hm5C_associated_SNPs_61184 0 0 1 ZNF622 POSTAR2 ENCODE chr19:53086913-53086976
64251 chr19 49671542 49671542 1 + G T UCS 49671540 + 49671520 49671560 41 CCTGGATTGTCACTGGGGGTCTGCACACGGGCATCGGCCGG CCTGGATTGTCACTGGGGGTCTTCACACGGGCATCGGCCGG < 41bp 0.764325167187649 0.4273503129413 0.5507152 0.7234388 prediction 0.528650334375298 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671540 chr19:49671542 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_61187 0 0 4 HNRNPM POSTAR2 ENCODE chr19:49671519-49671613
64251 chr21 45563136 45563136 1 + G C HNSC 45563132 + 45563112 45563152 41 GCGGCCAAGGTGCTCAGAGGCGTCGAGGTGACTGTGGGCCA GCGGCCAAGGTGCTCAGAGGCGTCCAGGTGACTGTGGGCCA < 41bp 0.764312616634339 0.481515782579339 0.6829891 0.7480245 prediction 0.528625233268679 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45563132 chr21:45563136 nonsynonymous SNV 0.495 2 25 hm5C_associated_SNPs_61188 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45563072-45563157
64251 chr2 85806263 85806263 1 + C T UCEC 85806261 + 85806241 85806281 41 GGGAAAACTTGGAACATCTCCGCAACAAGACAGAGGATCTG GGGAAAACTTGGAACATCTCCGTAACAAGACAGAGGATCTG < 41bp 0.783904870006149 0.519607618486655 0.11856079 0.11661214 prediction 0.528594503038988 Functional Loss - VAMP8 ENSG00000118640 CDS Human protein_coding chr2:85806261 chr2:85806263 synonymous SNV . 0 23 hm5C_associated_SNPs_61189 0 0 2 GRWD1 POSTAR2 ENCODE chr2:85806175-85806288
64251 chr17 40721585 40721585 1 + C T STAD 40721583 + 40721563 40721603 41 AAGCAGGAGGAGGAGGTGTCCACGTTACGCAAGGATGTCAC AAGCAGGAGGAGGAGGTGTCCATGTTACGCAAGGATGTCAC < 41bp 0.78642825850559 0.522133293650139 0.15120015 0.24784005 prediction 0.528589929710902 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40721583 chr17:40721585 nonsynonymous SNV 0.898 2 23 hm5C_associated_SNPs_61191 0 0 7 DDX24 POSTAR2 ENCODE chr17:40721580-40721625
64251 chr9 104075207 104075207 1 + C T UCEC 104075205 + 104075185 104075225 41 TCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTT TCTGAGTATCGGAACCACTGCTTGGACGTGATTGCTGGTTT < 41bp 0.795251828298422 0.530963838200318 0.37478507 0.22095835 prediction 0.528575980196209 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104075205 chr9:104075207 nonsynonymous SNV 0.963 3 23 hm5C_associated_SNPs_61194 0 0 1 PRPF8 POSTAR2 ENCODE chr9:104075196-104075274
64251 chr10 60562921 60562921 1 + C T COAD 60562919 + 60562899 60562939 41 AGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCA AGAAGGCTCCAGGGAGTGAGCGTGCTGCAGAGAGGGCAGCA < 41bp 0.777497817823272 0.513219407516672 0.46522206 0.65427345 prediction 0.528556820613199 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60562919 chr10:60562921 synonymous SNV . 0 23 hm5C_associated_SNPs_61195 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr10:60562880-60562960
64251 chr21 44427698 44427698 1 + C T UCEC 44427696 + 44427676 44427716 41 CCCCCTGTGGAGTCTCAGACCCCGATGGATGTGGACAAGCA CCCCCTGTGGAGTCTCAGACCCTGATGGATGTGGACAAGCA < 41bp 0.76426903681033 0.487995986198114 0.21426034 0.2206994 prediction 0.52853807362066 Functional Loss - PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44427696 chr21:44427698 nonsynonymous SNV 0.975 1 23 hm5C_associated_SNPs_61197 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:44427690-44427715
64251 chr12 57922286 57922286 1 + A T SARC 57922282 + 57922262 57922302 41 GCAGCATAATGGGGAGCTGGCTGAAGGGGGTGCTGAGCCCA GCAGCATAATGGGGAGCTGGCTGATGGGGGTGCTGAGCCCA < 41bp 0.764252316223992 0.444737193789285 0.8916732 0.88254 prediction 0.528504632447984 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922282 chr12:57922286 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_61201 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:57922269-57922293
64251 chr22 39411728 39411728 1 + C T SKCM 39411726 + 39411706 39411746 41 ATAAAGCGCCGCTCAGTTGTCTCCTGGAAGACGGGCGTCTT ATAAAGCGCCGCTCAGTTGTCTTCTGGAAGACGGGCGTCTT < 41bp 0.764248910032349 0.4994272517311 0.15213144 0.18483165 prediction 0.528497820064698 Functional Loss - APOBEC3C ENSG00000244509 CDS Human protein_coding chr22:39411726 chr22:39411728 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_61202 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr22:39411711-39411730
64251 chr11 12883835 12883835 1 + A T OV 12883831 + 12883811 12883851 41 ATAGCCAGATACATCAAACTCAGGACAGGCAAGACGAGGAC ATAGCCAGATACATCAAACTCAGGTCAGGCAAGACGAGGAC < 41bp 0.764246672913841 0.441199871887201 0.74008316 0.37164032 prediction 0.528493345827682 Functional Loss - TEAD1 ENSG00000187079 CDS Human protein_coding chr11:12883831 chr11:12883835 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_61205 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:12883810-12883838
64251 chr17 7558868 7558868 1 + C T SKCM 7558866 + 7558846 7558886 41 GAGATGAAGATGCTGAGAATCTCGGCAACTTCGTCATGTTC GAGATGAAGATGCTGAGAATCTTGGCAACTTCGTCATGTTC < 41bp 0.769018192370622 0.504780250337755 0.19957957 0.11882216 prediction 0.528475884065735 Functional Loss - ATP1B2 ENSG00000129244 CDS Human protein_coding chr17:7558866 chr17:7558868 synonymous SNV . 0 23 hm5C_associated_SNPs_61209 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7558862-7558900
64251 chr15 91029315 91029315 1 + C T rs145573380 91029313 + 91029293 91029333 41 CGGAGCACAATGATCCAATCCACGAACTGCTGGACGACCTC CGGAGCACAATGATCCAATCCATGAACTGCTGGACGACCTC < 41bp 0.764234490804386 0.477832995930578 0.11740914 0.06789136 prediction 0.528468981608772 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91029313 chr15:91029315 synonymous SNV . 0 23 hm5C_associated_SNPs_61210 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr15:91029309-91029328
64251 chr17 16285314 16285314 1 + G T UCEC 16285311 + 16285291 16285331 41 GAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCC GAAAATGTGAAGGCCAAGATCCATGATAAGGAAGGCATTCC < 41bp 0.764219576796306 0.37573364483445 0.7986506 0.1935896 prediction 0.528439153592612 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285311 chr17:16285314 nonsynonymous SNV 0.818 0 24 hm5C_associated_SNPs_61212 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16285214-16285350
64251 chr4 103422917 103422917 1 + A T rs570219373 103422913 + 103422893 103422933 41 TAGGAGGGAGAGCCCACCCGCGCCAGGAGGCCGAACGCGGA TAGGAGGGAGAGCCCACCCGCGCCTGGAGGCCGAACGCGGA < 41bp 0.821787979316248 0.557619336679883 0.44170967 0.30364704 prediction 0.528337285272731 Functional Loss - LOC105377621 ENSG00000109320 UTR5 Human protein_coding chr4:103422913 chr4:103422917 . . 0 25 hm5C_associated_SNPs_61220 0 0 4 DDX3X POSTAR2 ENCODE chr4:103422866-103422940
64251 chr4 170625244 170625244 1 + C T COAD 170625242 + 170625222 170625262 41 AGCAGCTTGCCTACTATCACCACGACTGGTTTATCTTTAAG AGCAGCTTGCCTACTATCACCATGACTGGTTTATCTTTAAG < 41bp 0.764130524338632 0.49318987900626 0.07502812 0.111505 prediction 0.528261048677263 Functional Loss - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170625242 chr4:170625244 synonymous SNV . 0 23 hm5C_associated_SNPs_61226 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr4:170625223-170625245
64251 chr4 170625245 170625245 1 + G T UCEC 170625242 + 170625222 170625262 41 AGCAGCTTGCCTACTATCACCACGACTGGTTTATCTTTAAG AGCAGCTTGCCTACTATCACCACTACTGGTTTATCTTTAAG < 41bp 0.764130524338632 0.396431085659622 0.07502812 0.07196888 prediction 0.528261048677263 Functional Loss - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170625242 chr4:170625245 nonsynonymous SNV 0.974 2 24 hm5C_associated_SNPs_61227 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr4:170625223-170625245
64251 chr12 81536919 81536919 1 + G T OV 81536916 + 81536896 81536936 41 CTTTGGCTCCCGGTCGTGACCTTGATTGGGATGAAGAGATG CTTTGGCTCCCGGTCGTGACCTTTATTGGGATGAAGAGATG < 41bp 0.764111463962579 0.381927059341843 0.077833354 0.008312315 prediction 0.528222927925158 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81536916 chr12:81536919 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_61230 0 0 2 BUD13 POSTAR2 ENCODE chr12:81536859-81536976
64251 chr18 77089302 77089302 1 + G T LUAD 77089299 + 77089279 77089319 41 AAGCGGATGGGCGTCATCGTCAGGGTGAGGCTGCGGGGAGG AAGCGGATGGGCGTCATCGTCAGTGTGAGGCTGCGGGGAGG < 41bp 0.900209066504877 0.636098916491959 0.9233333 0.80207515 prediction 0.528220300025836 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77089299 chr18:77089302 nonsynonymous SNV 0.021 2 24 hm5C_associated_SNPs_61231 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:77089275-77089303
64251 chr1 28562758 28562758 1 + G T COAD 28562755 + 28562735 28562775 41 TGTGGGGCGTGAGGACCATGCAAGCCCGAGGCTTCGGCTCG TGTGGGGCGTGAGGACCATGCAATCCCGAGGCTTCGGCTCG < 41bp 0.764108577379811 0.391568976539594 0.5959345 0.19182351 prediction 0.528217154759621 Functional Loss - ATPIF1 ENSG00000130770 CDS Human protein_coding chr1:28562755 chr1:28562758 nonsynonymous SNV 0.278 0 24 hm5C_associated_SNPs_61232 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:28562640-28562760
64251 chr2 65296671 65296671 1 + G T TGCT 65296669 + 65296649 65296689 41 GGAGCTGCAGGGAGCGGGAGCTGGACATCCCAGGGCCCATG GGAGCTGCAGGGAGCGGGAGCTTGACATCCCAGGGCCCATG < 41bp 0.877048105893332 0.612947547385529 0.9038676 0.8661385 prediction 0.528201117015607 Functional Loss - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65296669 chr2:65296671 synonymous SNV . 0 23 hm5C_associated_SNPs_61233 0 0 2 BUD13 POSTAR2 ENCODE chr2:65296629-65296725
64251 chr19 4157247 4157247 1 + G T LUAD 4157245 + 4157225 4157265 41 CTCTTGCTCCACCACAACCCCAGGGCCAGTGATCCAAGTAC CTCTTGCTCCACCACAACCCCATGGCCAGTGATCCAAGTAC < 41bp 0.764086806090222 0.409052941900855 0.8666514 0.14993483 prediction 0.528173612180444 Functional Loss - CREB3L3 ENSG00000060566 CDS Human protein_coding chr19:4157245 chr19:4157247 nonsynonymous SNV 0.001 4 23 hm5C_associated_SNPs_61235 0 0 1 LARP7 POSTAR2 ENCODE chr19:4157246-4157254
64251 chr15 22997854 22997854 1 + C T STAD 22997852 + 22997832 22997872 41 TCCTTTCCAGAACATCTTGCCGCGAGTCCATGTGAAAGGTG TCCTTTCCAGAACATCTTGCCGTGAGTCCATGTGAAAGGTG < 41bp 0.790559283657117 0.526487014524066 0.24020952 0.19186255 prediction 0.528144538266102 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22997852 chr15:22997854 stopgain . 0 23 hm5C_associated_SNPs_61240 0 0 7 BUD13 POSTAR2 ENCODE chr15:22997822-22997918
64251 chr2 220144615 220144615 1 + G T UCEC 220144612 + 220144592 220144632 41 AGTGCGTCCGCTGATGACATCAAGAAGGCGTAAGTGCCTCC AGTGCGTCCGCTGATGACATCAATAAGGCGTAAGTGCCTCC < 41bp 0.764066896348864 0.377135453997155 0.2925135 0.0646362 prediction 0.528133792697728 Functional Loss - DNAJB2 ENSG00000135924 CDS Human protein_coding chr2:220144612 chr2:220144615 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61241 0 0 1 PPIG POSTAR2 ENCODE chr2:220144545-220144625
64251 chr2 228217244 228217244 1 + G C OV 228217240 + 228217220 228217260 41 CCTGCCTTAGACCTGTGTTGCGTGGTGGGTCTGCTGCCGCC CCTGCCTTAGACCTGTGTTGCGTGCTGGGTCTGCTGCCGCC < 41bp 0.76406339235343 0.491533221945871 0.918791 0.38900757 prediction 0.528126784706861 Functional Loss - MFF ENSG00000168958 CDS Human protein_coding chr2:228217240 chr2:228217244 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_61242 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:228217240-228217260
64251 chr19 11134277 11134277 1 + G T GBM 11134274 + 11134254 11134294 41 CCCTTCTTGCTCCGACGACTCAAGAAGGAAGTCGAGGCCCA CCCTTCTTGCTCCGACGACTCAATAAGGAAGTCGAGGCCCA < 41bp 0.764039151902384 0.392999668186484 0.28182825 0.059080094 prediction 0.528078303804768 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11134274 chr19:11134277 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_61245 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:11134260-11134280
64251 chrX 54578402 54578402 1 + G T HNSC 54578399 + 54578379 54578419 41 GCCAAAGCTGTCCTAGCTGACTGGGTGAGGTGAGGAGGGGG GCCAAAGCTGTCCTAGCTGACTGTGTGAGGTGAGGAGGGGG < 41bp 0.76403663844174 0.375907824172231 0.84295523 0.1793907 prediction 0.528073276883479 Functional Loss - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578399 chrX:54578402 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61246 0 0 2 BUD13 POSTAR2 ENCODE chrX:54578361-54578403
64251 chr21 39528417 39528417 1 + A T rs539680301 39528413 + 39528393 39528433 41 TTCAGACAAACCTTGGAAATCAAGAAAGTTCTGGAATGATG TTCAGACAAACCTTGGAAATCAAGTAAGTTCTGGAATGATG < 41bp 0.796388264778151 0.532363234267767 0.27482706 0.35120046 prediction 0.528050061020769 Functional Loss - DSCR8 ENSG00000198054 CDS Human protein_coding chr21:39528413 chr21:39528417 nonsynonymous SNV 0.746 1 25 hm5C_associated_SNPs_61247 0 0 4 IGF2BP1 POSTAR2 ENCODE chr21:39528396-39528433
64251 chr7 135312778 135312778 1 + C T GBM 135312776 + 135312756 135312796 41 CTACCCCAGTGGATCGCTACCGCCAGATTCTCCTCCCAGCT CTACCCCAGTGGATCGCTACCGTCAGATTCTCCTCCCAGCT < 41bp 0.798118594719025 0.534100476634117 0.8481515 0.49220377 prediction 0.528036236169816 Functional Loss - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312776 chr7:135312778 synonymous SNV . 0 23 hm5C_associated_SNPs_61248 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135312748-135312781
64251 chr8 48885589 48885589 1 + C T LGG 48885587 + 48885567 48885607 41 CGCGCACAGCACCATCATGCCGCGGCTAAGTGAGGAAGCCA CGCGCACAGCACCATCATGCCGTGGCTAAGTGAGGAAGCCA < 41bp 0.770461988344649 0.506457942812213 0.4173219 0.30978024 prediction 0.528008091064872 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48885587 chr8:48885589 nonsynonymous SNV 0.025 3 23 hm5C_associated_SNPs_61249 0 0 13 SRSF1 POSTAR2 GSE83923,GSM2221667 chr8:48885580-48885600
64251 chr2 198571256 198571256 1 + G C LUAD 198571255 + 198571235 198571275 41 GCTTCCGCTACTTTCTCCTTCGGCAGGGCGTCCCCAACTGG GCTTCCGCTACTTTCTCCTTCCGCAGGGCGTCCCCAACTGG < 41bp 0.833449654434946 0.569449009822228 0.5560496 0.3778614 prediction 0.528001289225436 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571255 chr2:198571256 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_61250 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:198571240-198571260
64251 chr8 68074105 68074105 1 + C T LUAD 68074103 + 68074083 68074123 41 AGAACAAAATTGCAAGCAAACTCCAAAGACCTCCTTCAGTT AGAACAAAATTGCAAGCAAACTTCAAAGACCTCCTTCAGTT < 41bp 0.763982349094984 0.463386346620521 0.9603877 0.07203674 prediction 0.527964698189968 Functional Loss - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68074103 chr8:68074105 synonymous SNV . 0 23 hm5C_associated_SNPs_61252 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067862 chr8:68074084-68074114
64251 chr12 72255232 72255232 1 + G T UCEC 72255230 + 72255210 72255250 41 CTTGATAAGTAGTATGTGTCCAGGACTTTATCCATACTCCA CTTGATAAGTAGTATGTGTCCATGACTTTATCCATACTCCA < 41bp 0.763965115265093 0.436526086241783 0.20078936 0.10475248 prediction 0.527930230530186 Functional Loss - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72255230 chr12:72255232 stopgain 0.460 0 23 hm5C_associated_SNPs_61258 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:72255221-72255251
64251 chr2 109988100 109988100 1 + G C READ 109988096 + 109988076 109988116 41 AGAACTGGGCGGAAGGCATGCTGGGAGACAAGATCGGGATC AGAACTGGGCGGAAGGCATGCTGGCAGACAAGATCGGGATC < 41bp 0.77077815916287 0.506846118734985 0.69394505 0.4836244 prediction 0.52786408085577 Functional Loss - SH3RF3 ENSG00000172985 CDS Human protein_coding chr2:109988096 chr2:109988100 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_61264 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:109988069-109988107
64251 chr3 169802841 169802841 1 + A T rs79112906 169802837 + 169802817 169802857 41 TTTTATGAACAGAAAGAACTCAGGACATATTAAAAAATAAA TTTTATGAACAGAAAGAACTCAGGTCATATTAAAAAATAAA < 41bp 0.763921650548546 0.486974926025943 0.09785813 0.035719007 prediction 0.527843301097092 Functional Loss - GPR160 ENSG00000173890 UTR3 Human protein_coding chr3:169802837 chr3:169802841 . . 0 25 hm5C_associated_SNPs_61269 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:169802832-169802855
64251 chr6 25972185 25972185 1 + G T LUSC 25972183 + 25972163 25972203 41 GAGGAAGAGAAGTCTTATCTCTGGAGGCTGGAGAAAGAAGA GAGGAAGAGAAGTCTTATCTCTTGAGGCTGGAGAAAGAAGA < 41bp 0.820728284164797 0.55681169465233 0.063981354 0.022919774 prediction 0.527833179024934 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25972183 chr6:25972185 nonsynonymous SNV 0.490 2 23 hm5C_associated_SNPs_61270 0 0 2 RBM15 POSTAR2 ENCODE chr6:25972159-25972272
64251 chr2 136403032 136403032 1 + G T LUAD 136403030 + 136403010 136403050 41 ACCAGTTAGATCCCAAGTGCCTGGACCTCCACAGCCACCTC ACCAGTTAGATCCCAAGTGCCTTGACCTCCACAGCCACCTC < 41bp 0.870902860182287 0.606991244464009 0.050921112 0.016205013 prediction 0.527823231436556 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136403030 chr2:136403032 stopgain 1.000 0 23 hm5C_associated_SNPs_61273 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:136403007-136403045
64251 chr12 104335647 104335647 1 + A T HNSC 104335643 + 104335623 104335663 41 ATCTCCCCTTGAATGTTTCCCGCGAGACTCTTCAGCAACAT ATCTCCCCTTGAATGTTTCCCGCGTGACTCTTCAGCAACAT < 41bp 0.857578187055038 0.593670307971991 0.058148563 0.03979513 prediction 0.527815758166095 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335643 chr12:104335647 nonsynonymous SNV 0.988 4 25 hm5C_associated_SNPs_61275 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104335617-104335667
64251 chrX 129189993 129189993 1 + G T UCEC 129189990 + 129189970 129190010 41 GCTGACCCCTGCCGAGAGGCCTGGAGGCTTGGACGACAGAT GCTGACCCCTGCCGAGAGGCCTGTAGGCTTGGACGACAGAT < 41bp 0.763899272486837 0.37997831976886 0.56244224 0.09805232 prediction 0.527798544973674 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129189990 chrX:129189993 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_61279 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129189980-129190004
64251 chr19 804535 804535 1 + G T LUSC 804532 + 804512 804552 41 CACGGCTGTGCCTCCCACAGCGGGCCCAGGCGGCCCTGCAG CACGGCTGTGCCTCCCACAGCGGTCCCAGGCGGCCCTGCAG < 41bp 0.763887471162312 0.35717781280084 0.9107885 0.42297348 prediction 0.527774942324623 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804532 chr19:804535 nonsynonymous SNV 0.834 1 24 hm5C_associated_SNPs_61281 0 0 14 BUD13 POSTAR2 ENCODE chr19:804512-804560
64251 chrX 133930859 133930859 1 - C G rs765344830 133930863 - 133930843 133930883 41 GTCCTCGGTGCTAGCGCTGCCCGGGCAGCCGCAGCATCTGT GTCCTCGGTGCTAGCGCTGCCCGGCCAGCCGCAGCATCTGT < 41bp 0.776395152532838 0.512509372573931 0.16683224 0.03112176 prediction 0.527771559917813 Functional Loss - FAM122C ENSG00000156500;ENSG00000156504 UTR5 Human other chrX:133930863 chrX:133930859 . . 0 25 hm5C_associated_SNPs_61282 0 0 9 CPSF1 POSTAR2 GSE37401,GSM917672 chrX:133930840-133930860
64251 chrX 102005196 102005196 1 + G T LUAD 102005194 + 102005174 102005214 41 GAACTCACCGGGACAGCAATCTGGATTAAAGATACTAGGAC GAACTCACCGGGACAGCAATCTTGATTAAAGATACTAGGAC < 41bp 0.848222460594822 0.58434817730759 0.38655514 0.14540792 prediction 0.527748566574464 Functional Loss - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102005194 chrX:102005196 stopgain 1.000 1 23 hm5C_associated_SNPs_61284 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:102005159-102005221
64251 chr4 122737961 122737961 1 + C T BRCA 122737959 + 122737939 122737979 41 CAGTGCAAAACAAGAAAAAGCACCAAGTAAAAAGCCAGTGA CAGTGCAAAACAAGAAAAAGCATCAAGTAAAAAGCCAGTGA < 41bp 0.763870069169489 0.498089142070692 0.8025647 0.35653988 prediction 0.527740138338977 Functional Loss - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122737959 chr4:122737961 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_61286 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:122737957-122737978
64251 chr4 37848659 37848659 1 + C T UCEC 37848657 + 37848637 37848677 41 GATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCAC GATCGCAGTGCTCTCAAAGACATGTACATGTTGTCCAGCAC < 41bp 0.771735593740057 0.507879044265115 0.1203374 0.12093109 prediction 0.527713098949884 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37848657 chr4:37848659 nonsynonymous SNV 0.141 1 23 hm5C_associated_SNPs_61288 0 0 1 ZNF622 POSTAR2 ENCODE chr4:37848570-37848667
64251 chrX 129147563 129147563 1 + C T SKCM 129147561 + 129147541 129147581 41 GTGCCCACGCTCATCTCTGACTCGAACCCCCTTTCTGTTTC GTGCCCACGCTCATCTCTGACTTGAACCCCCTTTCTGTTTC < 41bp 0.766035778025318 0.502182059826146 0.36926764 0.1227597 prediction 0.527707436398345 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147561 chrX:129147563 nonsynonymous SNV 0.274 2 23 hm5C_associated_SNPs_61289 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chrX:129147549-129147577
64251 chr11 65111510 65111510 1 + G T LUAD 65111507 + 65111487 65111527 41 AGAAGCTGGATGCTTCCATCCTGGAGGACCGGGATAAGCCC AGAAGCTGGATGCTTCCATCCTGTAGGACCGGGATAAGCCC < 41bp 0.907415927287493 0.643564040351118 0.6992278 0.18892607 prediction 0.52770377387275 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65111507 chr11:65111510 stopgain 1.000 0 24 hm5C_associated_SNPs_61290 0 0 13 BUD13 POSTAR2 ENCODE chr11:65111492-65111542
64251 chr2 220098074 220098074 1 + G T COAD 220098071 + 220098051 220098091 41 CGGGCCAAGCGGGGCACAGCCCAGGGGCTTCGGGATGCCCG CGGGCCAAGCGGGGCACAGCCCATGGGCTTCGGGATGCCCG < 41bp 0.763820419364763 0.356505505322091 0.90098596 0.19151756 prediction 0.527640838729526 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098071 chr2:220098074 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_61294 0 0 7 GRWD1 POSTAR2 ENCODE chr2:220098070-220098097
64251 chr19 42791010 42791010 1 + C T SKCM 42791008 + 42790988 42791028 41 GCACCCAGCCAGCCTGACCCCTCCGTGCAGCCGAGCGAGGC GCACCCAGCCAGCCTGACCCCTTCGTGCAGCCGAGCGAGGC < 41bp 0.770725726784512 0.506909764867928 0.25631016 0.17362571 prediction 0.527631923833167 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791008 chr19:42791010 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_61297 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:42790979-42791014
64251 chr10 74928038 74928038 1 + A C rs533069307 74928034 + 74928014 74928054 41 GGAGGGCCAGGCCCGGAGGCCCCCACCCTGGCGTGCCTGCC GGAGGGCCAGGCCCGGAGGCCCCCCCCCTGGCGTGCCTGCC < 41bp 0.763813383505883 0.472995738052142 0.21781868 0.18759358 prediction 0.527626767011765 Functional Loss - FAM149B1 ENSG00000138286 UTR5 Human protein_coding chr10:74928034 chr10:74928038 . . 0 25 hm5C_associated_SNPs_61299 0 0 2 DDX3X POSTAR2 ENCODE chr10:74927988-74928087
64251 chr1 210012391 210012391 1 + C T UCEC 210012389 + 210012369 210012409 41 AGGGAGAATATGGATCAGATCCCGAGGAGAGACCACCCAAC AGGGAGAATATGGATCAGATCCTGAGGAGAGACCACCCAAC < 41bp 0.791667769477859 0.527859629540632 0.31197262 0.358316 prediction 0.527616279874454 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012389 chr1:210012391 synonymous SNV . 0 23 hm5C_associated_SNPs_61301 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:210012377-210012395
64251 chr16 67670700 67670700 1 + A T HNSC 67670696 + 67670676 67670716 41 GTGACCCCAGCCCCACCACCCGCCAAGAAGCGGAGAGGACG GTGACCCCAGCCCCACCACCCGCCTAGAAGCGGAGAGGACG < 41bp 0.763782959663023 0.423190033984335 0.29215652 0.093170494 prediction 0.527565919326047 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67670696 chr16:67670700 stopgain 0.996 1 25 hm5C_associated_SNPs_61305 0 0 2 GRWD1 POSTAR2 ENCODE chr16:67670598-67670711
64251 chr6 27599290 27599290 1 + A C rs189697993 27599286 + 27599266 27599306 41 GTTGTGAGTTCGAGCCTCACCTGGAGCATGTTTTCTTCCAA GTTGTGAGTTCGAGCCTCACCTGGCGCATGTTTTCTTCCAA < 41bp 0.872777106839933 0.608997969397786 0.6547561 0.8239386 prediction 0.527558274884295 Functional Loss - ZNF184;LINC01012 ENSG00000238648 ncRNA_exonic Human other chr6:27599286 chr6:27599290 . . 0 25 hm5C_associated_SNPs_61306 0 0 64 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27599279-27599300
64251 chr20 3452154 3452154 1 + G C KIRP 3452150 + 3452130 3452170 41 GGCGAGCAATGCCAGCACTGCGGGGGCCGCTTCAGGTGAGT GGCGAGCAATGCCAGCACTGCGGGCGCCGCTTCAGGTGAGT < 41bp 0.777312071340319 0.513535449852622 0.8591583 0.7905522 prediction 0.527553242975395 Functional Loss - ATRN ENSG00000088812 CDS Human protein_coding chr20:3452150 chr20:3452154 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_61307 0 0 4 BUD13 POSTAR2 ENCODE chr20:3452120-3452164
64251 chr1 185067376 185067376 1 + G T LGG 185067374 + 185067354 185067394 41 AGAGCTTGATAATAACAATGCAGCAATGGCAATTGATCCAG AGAGCTTGATAATAACAATGCATCAATGGCAATTGATCCAG < 41bp 0.763771548730412 0.447614678102203 0.18066165 0.088421404 prediction 0.527543097460824 Functional Loss - RNF2 ENSG00000121481 CDS Human protein_coding chr1:185067374 chr1:185067376 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_61308 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:185067281-185067377
64251 chr15 69548268 69548268 1 + G T SARC 69548266 + 69548246 69548286 41 ACAAAGCAATCCAGTTTCCACGGCGTTCGAGTAGTGGCTTC ACAAAGCAATCCAGTTTCCACGTCGTTCGAGTAGTGGCTTC < 41bp 0.76376085194399 0.437472344263963 0.3040067 0.104822695 prediction 0.527521703887981 Functional Loss - GLCE ENSG00000138604 CDS Human protein_coding chr15:69548266 chr15:69548268 synonymous SNV . 0 23 hm5C_associated_SNPs_61309 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:69548232-69548270
64251 chr1 231829710 231829710 1 + G T LUAD 231829707 + 231829687 231829727 41 GGGCACACTGTTCCGGTTCCCAGGAGGGGTGTCTGGCGAGG GGGCACACTGTTCCGGTTCCCAGTAGGGGTGTCTGGCGAGG < 41bp 0.875719166146297 0.611968417528411 0.93309736 0.24894542 prediction 0.527501497235773 Functional Loss - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231829707 chr1:231829710 nonsynonymous SNV 0.008 2 24 hm5C_associated_SNPs_61311 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:231829697-231829730
64251 chr15 90768989 90768989 1 + G T ESCA 90768986 + 90768966 90769006 41 GTGGGGACTGCCTCCTCGCCCGGGACCCCTACTGTGCTTGG GTGGGGACTGCCTCCTCGCCCGGTACCCCTACTGTGCTTGG < 41bp 0.914403050111629 0.650673879867381 0.8589196 0.39097655 prediction 0.527458340488496 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90768986 chr15:90768989 nonsynonymous SNV 0.446 4 24 hm5C_associated_SNPs_61316 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:90768977-90768998
64251 chr11 61545282 61545282 1 + C T UCEC 61545280 + 61545260 61545300 41 AGATACAAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGGC AGATACAAGCCCGAGTTCGCCGTCAGCGCGGGCATCGAGGC < 41bp 0.763712891310175 0.489263854666863 0.30271754 0.26045722 prediction 0.527425782620349 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61545280 chr11:61545282 nonsynonymous SNV 0.673 1 23 hm5C_associated_SNPs_61319 0 0 5 GRWD1 POSTAR2 ENCODE chr11:61545231-61545306
64251 chr17 40647107 40647107 1 + C T SKCM 40647105 + 40647085 40647125 41 ATTTTATTGATGGGTGTGTTCTCCATGTACACTGGCCTCAT ATTTTATTGATGGGTGTGTTCTTCATGTACACTGGCCTCAT < 41bp 0.815374939648979 0.551666869952209 0.94807947 0.21437109 prediction 0.527416139393541 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40647105 chr17:40647107 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_61320 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:40647080-40647116
64251 chr17 34935839 34935839 1 + A T LUSC 34935835 + 34935815 34935855 41 ATCTTGGTGTTGATGCTTTACGCAAGAGTTTTGAGGTAAGA ATCTTGGTGTTGATGCTTTACGCATGAGTTTTGAGGTAAGA < 41bp 0.763706367707989 0.43633744813045 0.14312536 0.088438034 prediction 0.527412735415977 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34935835 chr17:34935839 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_61321 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:34935814-34935843
64251 chr14 24617561 24617561 1 + A C ACC 24617557 + 24617537 24617577 41 GGCAGGAGGAGCCAGATGAGCACCAGGTTGCTACAGTCACA GGCAGGAGGAGCCAGATGAGCACCCGGTTGCTACAGTCACA < 41bp 0.763699939561095 0.34821615010587 0.58453774 0.3910851 prediction 0.527399879122189 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617557 chr14:24617561 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_61324 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr14:24617561-24617562
64251 chr20 34055253 34055253 1 + G T ESCA 34055250 + 34055230 34055270 41 GATCTGGAAGAATGGATGGGCGGGAGCCGGCCCAGCTGCTG GATCTGGAAGAATGGATGGGCGGTAGCCGGCCCAGCTGCTG < 41bp 0.907464826893244 0.643775181475217 0.8411912 0.43366215 prediction 0.527379290836054 Functional Loss - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34055250 chr20:34055253 stopgain 0.069 0 24 hm5C_associated_SNPs_61329 0 0 14 BUD13 POSTAR2 ENCODE chr20:34055211-34055319
64251 chr19 47673146 47673146 1 + G T SARC 47673144 + 47673124 47673164 41 GTGAGAAAGCAAAGGCTGCTCTGAAGCGCACGACCTCCGAC GTGAGAAAGCAAAGGCTGCTCTTAAGCGCACGACCTCCGAC < 41bp 0.86756512307563 0.603885217934246 0.22004417 0.18466073 prediction 0.52735981028277 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47673144 chr19:47673146 synonymous SNV . 0 23 hm5C_associated_SNPs_61330 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47673086-47673172
64251 chr6 31525956 31525956 1 + G T UCEC 31525954 + 31525934 31525974 41 GCTCCAGCCAGAGCTGGCGACAGCAGGAGGAGGAGCAGCGG GCTCCAGCCAGAGCTGGCGACATCAGGAGGAGGAGCAGCGG < 41bp 0.763662236298739 0.487781949345452 0.84136575 0.7258026 prediction 0.527324472597478 Functional Loss - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31525954 chr6:31525956 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_61331 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr6:31525927-31525960
64251 chr5 36686187 36686187 1 + C T UCEC 36686185 + 36686165 36686205 41 AGGGATCGCCTCCGGACCACCACCAACGTACTGGGAGACTC AGGGATCGCCTCCGGACCACCATCAACGTACTGGGAGACTC < 41bp 0.763651398314892 0.491490863070342 0.7588072 0.38240218 prediction 0.527302796629784 Functional Loss - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36686185 chr5:36686187 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_61336 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:36686180-36686200
64251 chr8 9588486 9588486 1 + C T SKCM 9588484 + 9588464 9588504 41 ACTTCGCAGCAGGCTACAACCGCGTGTCTGTTGTAGAGTAC ACTTCGCAGCAGGCTACAACCGTGTGTCTGTTGTAGAGTAC < 41bp 0.773003765617128 0.50935826477257 0.6931753 0.46170378 prediction 0.527291001689116 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9588484 chr8:9588486 synonymous SNV . 0 23 hm5C_associated_SNPs_61338 0 0 6 DDX24 POSTAR2 ENCODE chr8:9588399-9588491
64251 chr1 148932853 148932853 1 + G T LUAD 148932851 + 148932831 148932871 41 CTGCCCAGCATGGCTGCATCCAGTACCAAGAGTTGGTGGGA CTGCCCAGCATGGCTGCATCCATTACCAAGAGTTGGTGGGA < 41bp 0.763625715036964 0.41093758120207 0.19035223 0.04147178 prediction 0.527251430073927 Functional Loss - LOC645166 ENSG00000232527 ncRNA_exonic Human lincRNA chr1:148932851 chr1:148932853 . . 0 23 hm5C_associated_SNPs_61341 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:148932805-148932854
64251 chr15 41247885 41247885 1 + G T LUAD 41247883 + 41247863 41247903 41 AGCTCTGTGGGCCTCAGGCGCAGGACGAGCACCTGGCAGCC AGCTCTGTGGGCCTCAGGCGCATGACGAGCACCTGGCAGCC < 41bp 0.866009932697056 0.602384679415038 0.8918826 0.3731745 prediction 0.527250506564035 Functional Loss - CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247883 chr15:41247885 nonsynonymous SNV 0.914 2 23 hm5C_associated_SNPs_61342 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:41247847-41247885
64251 chr10 75519922 75519922 1 + G T LUAD 75519919 + 75519899 75519939 41 CCCAGCGATCTGCCCCATCACAGGCCTCCAGCTTCACACCC CCCAGCGATCTGCCCCATCACAGTCCTCCAGCTTCACACCC < 41bp 0.763618146855229 0.365811848464491 0.37936234 0.10229996 prediction 0.527236293710458 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519919 chr10:75519922 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_61344 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75519919-75519957
64251 chr19 13264246 13264246 1 + G T COAD 13264243 + 13264223 13264263 41 CGAGAAGCCGAGTCCACGGCCGAGACAGCGACCCCCGACGG CGAGAAGCCGAGTCCACGGCCGATACAGCGACCCCCGACGG < 41bp 0.914567869199937 0.650951153184869 0.71887416 0.13498053 prediction 0.527233432030137 Functional Loss - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264243 chr19:13264246 nonsynonymous SNV 0.049 0 24 hm5C_associated_SNPs_61345 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:13264240-13264260
64251 chr17 53014508 53014508 1 + C T UCEC 53014506 + 53014486 53014526 41 CTGCCCCATCTCAAGATCTCCTCGACCTAAGTCCCAGTCCC CTGCCCCATCTCAAGATCTCCTTGACCTAAGTCCCAGTCCC < 41bp 0.764976243931925 0.501383965274766 0.4739076 0.1441167 prediction 0.527184557314318 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014506 chr17:53014508 synonymous SNV . 0 23 hm5C_associated_SNPs_61351 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:53014497-53014551
64251 chr1 32669915 32669915 1 + G T BLCA 32669913 + 32669893 32669933 41 AGAGGAAGAGGATGGGGTCACTGAGGGGCTGCCAGAGGAGC AGAGGAAGAGGATGGGGTCACTTAGGGGCTGCCAGAGGAGC < 41bp 0.763591700034768 0.429940907246134 0.76778984 0.757067 prediction 0.527183400069536 Functional Loss - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32669913 chr1:32669915 stopgain 0.984 1 23 hm5C_associated_SNPs_61352 0 0 9 DDX55 POSTAR2 ENCODE chr1:32669860-32669930
64251 chr11 112101363 112101363 1 + G C HNSC 112101362 + 112101342 112101382 41 TCTTTAGATTGACCCTGCTACGGGAATGGTTATGAATCTGG TCTTTAGATTGACCCTGCTACCGGAATGGTTATGAATCTGG < 41bp 0.822981247061676 0.559399721662051 0.6189986 0.37748387 prediction 0.527163050799249 Functional Loss - PTS ENSG00000150787 CDS Human protein_coding chr11:112101362 chr11:112101363 synonymous SNV . 0 22 hm5C_associated_SNPs_61353 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:112101346-112101375
64251 chr19 5623236 5623236 1 + G T COAD 5623233 + 5623213 5623253 41 TGGAATGGCGGAGACTCTGTCAGGCCTAGGTGATTCTGGAG TGGAATGGCGGAGACTCTGTCAGTCCTAGGTGATTCTGGAG < 41bp 0.763580724486415 0.373511937457558 0.9262033 0.89258265 prediction 0.52716144897283 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5623233 chr19:5623236 nonsynonymous SNV 0.952 1 24 hm5C_associated_SNPs_61354 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:5623220-5623240
64251 chr2 219301924 219301924 1 + G T UCEC 219301921 + 219301901 219301941 41 ACCACTGCACAGGAATACCTCAAGACCCATCCCAGCGGGCG ACCACTGCACAGGAATACCTCAATACCCATCCCAGCGGGCG < 41bp 0.763572204376358 0.365946488015558 0.4126402 0.32264525 prediction 0.527144408752715 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219301921 chr2:219301924 nonsynonymous SNV 0.919 1 24 hm5C_associated_SNPs_61356 0 0 6 BUD13 POSTAR2 ENCODE chr2:219301822-219301925
64251 chr22 45132680 45132680 1 + G T BLCA 45132677 + 45132657 45132697 41 CGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAA CGCCTCCTCCGCCGCTCCCGCTCTGGGGACGTGCTGGCCAA < 41bp 0.763556947331273 0.371745067402702 0.40382373 0.26797134 prediction 0.527113894662545 Functional Loss - PRR5 ENSG00000186654 CDS Human protein_coding chr22:45132677 chr22:45132680 synonymous SNV . 0 24 hm5C_associated_SNPs_61358 0 0 1 DDX59 POSTAR2 ENCODE chr22:45132647-45132690
64251 chr3 45637310 45637310 1 + A T LUAD 45637306 + 45637286 45637326 41 CCCCAGGCAAGGAGGTCTTCCAAGATCAAACTCGGGGCTGG CCCCAGGCAAGGAGGTCTTCCAAGTTCAAACTCGGGGCTGG < 41bp 0.829472066192092 0.56591774464311 0.4158332 0.2375294 prediction 0.527108643097963 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637306 chr3:45637310 nonsynonymous SNV 0.212 0 25 hm5C_associated_SNPs_61359 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr3:45637300-45637320
64251 chr3 48508893 48508893 1 + G T BLCA 48508890 + 48508870 48508910 41 TCTTCCTCCAGTGAAGGACCCTGGAGCCCTATCCAGGGAGG TCTTCCTCCAGTGAAGGACCCTGTAGCCCTATCCAGGGAGG < 41bp 0.907519539211942 0.64397958376609 0.844952 0.41103503 prediction 0.527079910891705 Functional Loss - TREX1 ENSG00000213689 CDS Human protein_coding chr3:48508890 chr3:48508893 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_61363 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:48508865-48508915
64251 chrX 21995231 21995231 1 + G C TGCT 21995227 + 21995207 21995247 41 ATCGACAGATACTGGCCCACCGCCGACGGGCGCCTGGTTGA ATCGACAGATACTGGCCCACCGCCCACGGGCGCCTGGTTGA < 41bp 0.820742670494258 0.557206407554802 0.089398295 0.05560741 prediction 0.527072525878913 Functional Loss - SMS ENSG00000102172 CDS Human protein_coding chrX:21995227 chrX:21995231 nonsynonymous SNV 0.813 4 25 hm5C_associated_SNPs_61364 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chrX:21995210-21995242
64251 chrX 107381089 107381089 1 + C T UCEC 107381087 + 107381067 107381107 41 ACACAGCTGGTGACAGGCCTCCCGATTCTTTAACTGCTTCA ACACAGCTGGTGACAGGCCTCCTGATTCTTTAACTGCTTCA < 41bp 0.788482107486169 0.524966266075633 0.32798004 0.28625304 prediction 0.527031682821072 Functional Loss - ATG4A ENSG00000101844 CDS Human protein_coding chrX:107381087 chrX:107381089 synonymous SNV . 0 23 hm5C_associated_SNPs_61367 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:107381061-107381107
64251 chr7 7645667 7645667 1 + C T rs138085974 7645665 + 7645645 7645685 41 CATGGTGTCATAATTGCAGGCACGGTGGACATGCTGGACAT CATGGTGTCATAATTGCAGGCATGGTGGACATGCTGGACAT < 41bp 0.771515794729672 0.508018444368854 0.26980966 0.20417988 prediction 0.526994700721636 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7645665 chr7:7645667 synonymous SNV . 0 23 hm5C_associated_SNPs_61372 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:7645646-7645684
64251 chr10 121541174 121541174 1 + G C HNSC 121541173 + 121541153 121541193 41 CATGGTGGCTTATTCTAATTCGGCAGAAAGCATTGGTGGGC CATGGTGGCTTATTCTAATTCCGCAGAAAGCATTGGTGGGC < 41bp 0.841342038595673 0.577855986701912 0.68881387 0.40534568 prediction 0.526972103787522 Functional Loss - INPP5F ENSG00000198825 CDS Human protein_coding chr10:121541173 chr10:121541174 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_61375 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:121541160-121541182
64251 chr12 122473294 122473294 1 + C T SKCM 122473292 + 122473272 122473312 41 GTGTGGCTCAGAGGTGACCACTCCGGAGAACAGTTCCTCCC GTGTGGCTCAGAGGTGACCACTTCGGAGAACAGTTCCTCCC < 41bp 0.816327417331326 0.552853537615635 0.14722389 0.13940012 prediction 0.526947759431383 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122473292 chr12:122473294 nonsynonymous SNV 0.960 3 23 hm5C_associated_SNPs_61379 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:122473248-122473301
64251 chr1 1560433 1560433 1 + A T THCA 1560429 + 1560409 1560449 41 GGCTGGGATGTGGAGACAGGCCGGAGTGTGGCCAGCGTGAC GGCTGGGATGTGGAGACAGGCCGGTGTGTGGCCAGCGTGAC < 41bp 0.763466585250711 0.47707733727965 0.63820004 0.579221 prediction 0.526933170501423 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1560429 chr1:1560433 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_61383 0 0 18 AARS POSTAR2 ENCODE chr1:1560397-1560439
64251 chr5 167812239 167812239 1 + C T BLCA 167812237 + 167812217 167812257 41 AACCACTCAGATTGAGGATCCTCGAGTACAATGGCGGCGGG AACCACTCAGATTGAGGATCCTTGAGTACAATGGCGGCGGG < 41bp 0.805977248041379 0.542511257932631 0.68587744 0.31094435 prediction 0.526931980217497 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167812237 chr5:167812239 stopgain 0.317 1 23 hm5C_associated_SNPs_61384 0 0 2 GRWD1 POSTAR2 ENCODE chr5:167812215-167812364
64251 chr6 160527254 160527254 1 + G T rs531327986 160527251 + 160527231 160527271 41 GGAGGAGGAGGGAGGCCAGGCGGGCATGGCGTGGAGGAGGA GGAGGAGGAGGGAGGCCAGGCGGTCATGGCGTGGAGGAGGA < 41bp 0.847532929518857 0.584079374851754 0.88531077 0.8127078 prediction 0.526907109334207 Functional Loss - IGF2R ENSG00000197081 UTR3 Human protein_coding chr6:160527251 chr6:160527254 . . 0 24 hm5C_associated_SNPs_61387 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:160527225-160527274
64251 chr14 93264047 93264047 1 + C T rs568247621 93264045 + 93264025 93264065 41 TGCAAATGTGAAAGTAGGATCTCGGACACCAGTAGAGGCCT TGCAAATGTGAAAGTAGGATCTTGGACACCAGTAGAGGCCT < 41bp 0.763448969389298 0.493341163705152 0.39548698 0.26716763 prediction 0.526897938778595 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93264045 chr14:93264047 nonsynonymous SNV 0.931 3 23 hm5C_associated_SNPs_61389 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93264019-93264069
64251 chr2 74184338 74184338 1 + C T UCEC 74184336 + 74184316 74184356 41 TAGAGCAGCTGCATGGCCAACACGAAGCCTGGCTTATTCAC TAGAGCAGCTGCATGGCCAACATGAAGCCTGGCTTATTCAC < 41bp 0.806082898384028 0.542643408681916 0.09589669 0.07400277 prediction 0.526878979404225 Functional Loss - DGUOK ENSG00000114956 CDS Human protein_coding chr2:74184336 chr2:74184338 synonymous SNV . 0 23 hm5C_associated_SNPs_61391 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74184321-74184350
64251 chr21 33765732 33765732 1 + G C BRCA 33765731 + 33765711 33765751 41 ACAATGAGTAGTTCTTGACCCGAGGTCGCCCTGAAGGTGTC ACAATGAGTAGTTCTTGACCCCAGGTCGCCCTGAAGGTGTC < 41bp 0.82276812710021 0.55936174914529 0.4158461 0.20744461 prediction 0.526812755909839 Functional Loss - URB1-AS1 ENSG00000256073 UTR3 Human lincRNA chr21:33765731 chr21:33765732 . . 0 22 hm5C_associated_SNPs_61399 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:33765703-33765758
64251 chr19 18468380 18468380 1 + C T BLCA 18468378 + 18468358 18468398 41 GCTGTGTGCAAGCGAGTCACCACGTTGGGCCTGGATGTGTC GCTGTGTGCAAGCGAGTCACCATGTTGGGCCTGGATGTGTC < 41bp 0.763405358117946 0.495836699630685 0.02901426 0.046314895 prediction 0.526810716235892 Functional Loss - PGPEP1 ENSG00000130517 CDS Human protein_coding chr19:18468378 chr19:18468380 nonsynonymous SNV 0.845 0 23 hm5C_associated_SNPs_61400 0 0 5 EFTUD2 POSTAR2 ENCODE chr19:18468360-18468513
64251 chrX 117700568 117700568 1 + G T UCEC 117700565 + 117700545 117700585 41 ACTAGCAGCCAAGGAAAAGCCGAGAACATCATGGCAAGTTT ACTAGCAGCCAAGGAAAAGCCGATAACATCATGGCAAGTTT < 41bp 0.763398809545919 0.406768094474768 0.35766453 0.15311807 prediction 0.526797619091838 Functional Loss - DOCK11 ENSG00000147251 CDS Human protein_coding chrX:117700565 chrX:117700568 nonsynonymous SNV 0.957 1 24 hm5C_associated_SNPs_61402 0 0 2 ZNF622 POSTAR2 ENCODE chrX:117700538-117700581
64251 chr22 18570857 18570857 1 + A C rs201117077 18570853 + 18570833 18570873 41 CGTGACTGAGGGTCCCTGCGCACCACAGCCTCTCTGCTCCT CGTGACTGAGGGTCCCTGCGCACCCCAGCCTCTCTGCTCCT < 41bp 0.763376967685738 0.369227377341018 0.049468756 0.063051134 prediction 0.526753935371476 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18570853 chr22:18570857 . . 0 25 hm5C_associated_SNPs_61406 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:18570823-18570859
64251 chr16 31122082 31122082 1 + G T THCA 31122080 + 31122060 31122100 41 GAGAAGTGGGTGGACTTTGCCAGGTGAGGCAAGAATGGCTC GAGAAGTGGGTGGACTTTGCCATGTGAGGCAAGAATGGCTC < 41bp 0.763371453986377 0.422294772971672 0.90372527 0.728912 prediction 0.526742907972753 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31122080 chr16:31122082 nonsynonymous SNV 0.986 3 23 hm5C_associated_SNPs_61407 0 0 5 EFTUD2 POSTAR2 ENCODE chr16:31122062-31122092
64251 chr6 44102451 44102451 1 + G C SKCM 44102447 + 44102427 44102467 41 CTGCCCTTTGGGGGCGTCCCCACCGTGCTGGCTCTCGACTT CTGCCCTTTGGGGGCGTCCCCACCCTGCTGGCTCTCGACTT < 41bp 0.763366055517873 0.48322387883085 0.24492535 0.15261146 prediction 0.526732111035746 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44102447 chr6:44102451 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_61408 0 0 3 DDX3X POSTAR2 ENCODE chr6:44102419-44102471
64251 chrX 2779704 2779704 1 + G T LUSC 2779701 + 2779681 2779721 41 ACCAGCCTGCTCAGGGCCTTCCGGAGCCGACCCAGATAGTG ACCAGCCTGCTCAGGGCCTTCCGTAGCCGACCCAGATAGTG < 41bp 0.763356134255846 0.374881074687712 0.8777058 0.2904374 prediction 0.526712268511692 Functional Loss - GYG2 ENSG00000056998 CDS Human protein_coding chrX:2779701 chrX:2779704 stopgain 0.001 0 24 hm5C_associated_SNPs_61410 0 0 2 GRWD1 POSTAR2 ENCODE chrX:2779593-2779719
64251 chr11 64023034 64023034 1 + A T LIHC 64023030 + 64023010 64023050 41 CAGCATCCTGAAGATGTTCTCAGCAGACAAGAAGCGGGTGG CAGCATCCTGAAGATGTTCTCAGCTGACAAGAAGCGGGTGG < 41bp 0.763352199881301 0.455268070188973 0.6382363 0.57559353 prediction 0.526704399762601 Functional Loss - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64023030 chr11:64023034 synonymous SNV . 0 25 hm5C_associated_SNPs_61411 0 0 2 PPIG POSTAR2 ENCODE chr11:64023032-64023076
64251 chr10 98711924 98711924 1 + T C rs139119919 98711923 + 98711903 98711943 41 CAGCACTTCCCTGAGCCACTCTCCAGGCTGCTCCAGTACTC CAGCACTTCCCTGAGCCACTCCCCAGGCTGCTCCAGTACTC < 41bp 0.763341916566201 0.499519647696625 0.91126454 0.18543163 prediction 0.526683833132402 Functional Loss - LCOR ENSG00000196233 CDS Human protein_coding chr10:98711923 chr10:98711924 synonymous SNV . 0 22 hm5C_associated_SNPs_61415 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:98711885-98711946
64251 chr6 32138255 32138255 1 - C A BLCA 32138257 - 32138237 32138277 41 CTTCATCGACCGGAAGCGCACGGGGGATGCCATCAGTGTCA CTTCATCGACCGGAAGCGCACGTGGGATGCCATCAGTGTCA < 41bp 0.771311287612788 0.507983891247394 0.93653077 0.4866266 prediction 0.526654792730789 Functional Loss - AGPAT1 ENSG00000204310 CDS Human protein_coding chr6:32138257 chr6:32138255 nonsynonymous SNV 0.987 5 23 hm5C_associated_SNPs_61418 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32138236-32138256
64251 chr19 49459574 49459574 1 + G T LUAD 49459572 + 49459552 49459592 41 GTCGCCCTTTTCTACTTTGCCAGCAAACTGGTGCTCAAGGT GTCGCCCTTTTCTACTTTGCCATCAAACTGGTGCTCAAGGT < 41bp 0.763325269544736 0.436643694307065 0.34972203 0.16279513 prediction 0.526650539089472 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49459572 chr19:49459574 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_61420 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49459452-49459587
64251 chr10 103906993 103906993 1 + C T BLCA 103906991 + 103906971 103907011 41 GCCTGCAGGTCAGCCAGCCCCTCAAGCCAGGGCTGGCAGGG GCCTGCAGGTCAGCCAGCCCCTTAAGCCAGGGCTGGCAGGG < 41bp 0.791891567738769 0.528566624152874 0.48878723 0.22101837 prediction 0.52664988717179 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906991 chr10:103906993 nonsynonymous SNV 0.991 0 23 hm5C_associated_SNPs_61421 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:103906993-103906994
64251 chr3 180686015 180686015 1 + C T ESCA 180686013 + 180685993 180686033 41 GGGTCGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCA GGGTCGAGGTCGTGGTGGACCATGTGGTGGCAAATCCTCCA < 41bp 0.772468807882873 0.509144451232268 0.34856537 0.27021927 prediction 0.52664871330121 Functional Loss - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180686013 chr3:180686015 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_61422 0 0 2 LIN28B POSTAR2 ENCODE chr3:180686002-180686043
64251 chr10 94109496 94109496 1 + C T UCEC 94109494 + 94109474 94109514 41 AGCAGATCATGTCTCTGCTACTCGAATCTTGTGTGGAGCCC AGCAGATCATGTCTCTGCTACTTGAATCTTGTGTGGAGCCC < 41bp 0.822339413159267 0.559020228849165 0.7926185 0.09892213 prediction 0.526638368620202 Functional Loss - MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94109494 chr10:94109496 stopgain 0.997 1 23 hm5C_associated_SNPs_61423 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:94109450-94109497
64251 chr10 94396952 94396952 1 + G T UCEC 94396949 + 94396929 94396969 41 TTCTGAAACCAGAATGTACTCAAGACTGATCTTCTAAGTTC TTCTGAAACCAGAATGTACTCAATACTGATCTTCTAAGTTC < 41bp 0.76329035441947 0.403847961749824 0.25735247 0.08789542 prediction 0.526580708838939 Functional Loss - KIF11 ENSG00000138160 CDS Human protein_coding chr10:94396949 chr10:94396952 nonsynonymous SNV 0.967 0 24 hm5C_associated_SNPs_61426 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94396918-94396972
64251 chrX 48652627 48652627 1 + G T UCEC 48652625 + 48652605 48652645 41 TGTCCTTCTCCTCTTGTAGCCAGAATTCTGGACAACCCAAG TGTCCTTCTCCTCTTGTAGCCATAATTCTGGACAACCCAAG < 41bp 0.857997285694843 0.594726010255515 0.86196375 0.5367069 prediction 0.526542550878656 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652625 chrX:48652627 nonsynonymous SNV 0.023 1 23 hm5C_associated_SNPs_61431 0 0 2 PUM2 POSTAR2 ENCODE chrX:48652622-48652710
64251 chr14 96010321 96010321 1 + A T LUSC 96010317 + 96010297 96010337 41 TTCCAACTGGCCCACCATCCCGCAAGTGTACCTCAATGGCG TTCCAACTGGCCCACCATCCCGCATGTGTACCTCAATGGCG < 41bp 0.856355555300069 0.59309663858825 0.041784465 0.008539289 prediction 0.526517833423638 Functional Loss - GLRX5 ENSG00000182512 CDS Human protein_coding chr14:96010317 chr14:96010321 nonsynonymous SNV 0.944 4 25 hm5C_associated_SNPs_61434 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:96010300-96010344
64251 chr10 5493826 5493826 1 + C T STAD 5493824 + 5493804 5493844 41 TAAAAGAGTTCGACCTCTGGCTCGTGTCACGTCCTTGGCAA TAAAAGAGTTCGACCTCTGGCTTGTGTCACGTCCTTGGCAA < 41bp 0.763258560751999 0.483596915691448 0.050006628 0.04846075 prediction 0.526517121503999 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5493824 chr10:5493826 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_61435 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5493804-5493834
64251 chr3 160945052 160945052 1 + G T OV 160945049 + 160945029 160945069 41 TTTTAGGTATTTTCAACCACCAGGAACTTGGATACAGTGTG TTTTAGGTATTTTCAACCACCAGTAACTTGGATACAGTGTG < 41bp 0.763254126538716 0.391537380260106 0.6255867 0.2736277 prediction 0.526508253077433 Functional Loss - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160945049 chr3:160945052 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_61436 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:160945042-160945090
64251 chr19 50154770 50154770 1 + G T LUAD 50154767 + 50154747 50154787 41 CTCGGTGGAGGTGGTGACCGCTGGTGGAGCCGCCCTCCCGC CTCGGTGGAGGTGGTGACCGCTGTTGGAGCCGCCCTCCCGC < 41bp 0.913589870696701 0.650351585791762 0.8282254 0.30435872 prediction 0.526476569809878 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154767 chr19:50154770 nonsynonymous SNV 0.417 1 24 hm5C_associated_SNPs_61438 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50154757-50154777
64251 chr1 227954727 227954727 1 + G T LUAD 227954725 + 227954705 227954745 41 GAGACCAGGAGGGCACAGCACTGCACCTGCAGACAAGCCTG GAGACCAGGAGGGCACAGCACTTCACCTGCAGACAAGCCTG < 41bp 0.872084482760819 0.608850284097405 0.18560627 0.13123292 prediction 0.526468397326827 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227954725 chr1:227954727 synonymous SNV . 0 23 hm5C_associated_SNPs_61439 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:227954702-227954738
64251 chr8 61777752 61777752 1 + G T UCEC 61777750 + 61777730 61777770 41 GCTGGTGAACAGCCTGTTTGCTGGAATGGACCTGACGAGCC GCTGGTGAACAGCCTGTTTGCTTGAATGGACCTGACGAGCC < 41bp 0.76322814827722 0.462944756617882 0.20401016 0.12320942 prediction 0.52645629655444 Functional Loss - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61777750 chr8:61777752 stopgain 0.995 1 23 hm5C_associated_SNPs_61441 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:61777690-61777754
64251 chr20 368924 368924 1 + A T LUSC 368920 + 368900 368940 41 CTACCAGGCCCTGCACTGCCCTACAGGCACTGAGTATACCT CTACCAGGCCCTGCACTGCCCTACTGGCACTGAGTATACCT < 41bp 0.763226865626002 0.436756850884325 0.84204096 0.14649215 prediction 0.526453731252004 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368920 chr20:368924 synonymous SNV . 0 25 hm5C_associated_SNPs_61442 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:368903-368937
64251 chr9 108397407 108397407 1 + C T STAD 108397405 + 108397385 108397425 41 TCCATGTACCCTGTGAAACCCTCGAATACATTGAAGCCAAC TCCATGTACCCTGTGAAACCCTTGAATACATTGAAGCCAAC < 41bp 0.793529805072636 0.530306392981747 0.9397265 0.16897115 prediction 0.526446824181778 Functional Loss - FKTN ENSG00000106692 CDS Human protein_coding chr9:108397405 chr9:108397407 synonymous SNV . 0 23 hm5C_associated_SNPs_61443 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:108397387-108397409
64251 chr11 65046229 65046229 1 + C T LUSC 65046227 + 65046207 65046247 41 TCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAG TCCCTCCCAGAAATACAACTCATGAAGTAACCGAGGAGAAG < 41bp 0.763213696872963 0.483706060100015 0.06153956 0.1046851 prediction 0.526427393745926 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65046227 chr11:65046229 stopgain 0.284 1 23 hm5C_associated_SNPs_61446 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65046202-65046230
64251 chr17 53068288 53068288 1 + G T LUAD 53068286 + 53068266 53068306 41 AAGGCCCATTGGTATATATTCAGGAAATTATTCCTGGAGGA AAGGCCCATTGGTATATATTCATGAAATTATTCCTGGAGGA < 41bp 0.763200529030172 0.437006580024694 0.9102032 0.31399116 prediction 0.526401058060344 Functional Loss - STXBP4 ENSG00000166263 CDS Human protein_coding chr17:53068286 chr17:53068288 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_61448 0 0 6 DDX24 POSTAR2 ENCODE chr17:53068189-53068312
64251 chr5 147661765 147661765 1 + G T OV 147661763 + 147661743 147661783 41 CCTCAAATGGCCACACTTTCCAGAATGAGTGTTTCTTTTGT CCTCAAATGGCCACACTTTCCATAATGAGTGTTTCTTTTGT < 41bp 0.857624165092624 0.594435867884546 0.25339285 0.07423675 prediction 0.526376594416156 Functional Loss - SPINK13 ENSG00000214510 CDS Human protein_coding chr5:147661763 chr5:147661765 nonsynonymous SNV 0.834 2 23 hm5C_associated_SNPs_61450 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:147661760-147661840
64251 chr2 136467055 136467055 1 + C T CESC 136467053 + 136467033 136467073 41 ATCAGAACAAGTACAATTTCCTCGAACCACTTCACCATGCA ATCAGAACAAGTACAATTTCCTTGAACCACTTCACCATGCA < 41bp 0.763183389942458 0.469761469779998 0.90934396 0.3455317 prediction 0.526366779884916 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136467053 chr2:136467055 stopgain 0.999 0 23 hm5C_associated_SNPs_61451 0 0 3 IGF2BP1 POSTAR2 ENCODE chr2:136467002-136467094
64251 chrX 37518857 37518857 1 + C T UCEC 37518855 + 37518835 37518875 41 ACTGCAACTGGCCACCTGAGCTCGGCGAGACCATCGAGAGA ACTGCAACTGGCCACCTGAGCTTGGCGAGACCATCGAGAGA < 41bp 0.777458554641186 0.514276337106443 0.16721949 0.16492304 prediction 0.526364435069487 Functional Loss - LANCL3 ENSG00000147036 CDS Human protein_coding chrX:37518855 chrX:37518857 synonymous SNV . 0 23 hm5C_associated_SNPs_61453 0 0 1 UCHL5 POSTAR2 ENCODE chrX:37518816-37518918
64251 chr1 228335335 228335335 1 + G C LUSC 228335334 + 228335314 228335354 41 AGGAGCAGCGGCTGCGGCAGCGCAACACTGAAACCGAGGAG AGGAGCAGCGGCTGCGGCAGCCCAACACTGAAACCGAGGAG < 41bp 0.845959948779047 0.582782565445565 0.5009197 0.7596673 prediction 0.526354766666964 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335334 chr1:228335335 nonsynonymous SNV 0.946 4 22 hm5C_associated_SNPs_61455 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228335318-228335388
64251 chr11 118889356 118889356 1 + A C rs35219560 118889352 + 118889332 118889372 41 CGAGCGTGTCGCTCCCAGTGCGCAAGTGCAGCAGGTGGCTG CGAGCGTGTCGCTCCCAGTGCGCACGTGCAGCAGGTGGCTG < 41bp 0.857210126001709 0.594033838773491 0.10421753 0.036692917 prediction 0.526352574456437 Functional Loss - TRAPPC4 ENSG00000118181;ENSG00000196655 UTR5 Human other chr11:118889352 chr11:118889356 . . 0 25 hm5C_associated_SNPs_61456 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:118889353-118889376
64251 chr1 16174571 16174571 1 + G T ACC 16174569 + 16174549 16174589 41 GCACGCCGCCCAGCATGGTCCGGGAAACCAGGCATCTCTGG GCACGCCGCCCAGCATGGTCCGTGAAACCAGGCATCTCTGG < 41bp 0.863456044530619 0.600280301645599 0.9160397 0.4098714 prediction 0.526351485770038 Functional Loss - SPEN ENSG00000065526 CDS Human protein_coding chr1:16174569 chr1:16174571 synonymous SNV . 0 23 hm5C_associated_SNPs_61457 0 0 17 FUS POSTAR2 DRA001158,DRS012384 chr1:16174533-16174577
64251 chr8 56864629 56864629 1 + C T UCEC 56864627 + 56864607 56864647 41 TGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCTGTA TGGGGGCTATTACATCTCTCCATGAATCACTTTTCCCTGTA < 41bp 0.763167956646723 0.473410873817397 0.16651347 0.10385388 prediction 0.526335913293446 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56864627 chr8:56864629 stopgain 0.997 1 23 hm5C_associated_SNPs_61458 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chrX 11139756 11139756 1 + C T COAD 11139754 + 11139734 11139774 41 ATGAGTTGCCTTTTGATAGGCACGATTGGATCATAAACCGT ATGAGTTGCCTTTTGATAGGCATGATTGGATCATAAACCGT < 41bp 0.763157521846239 0.497376876287313 0.028808266 0.15160862 prediction 0.526315043692477 Functional Loss - HCCS ENSG00000004961 CDS Human protein_coding chrX:11139754 chrX:11139756 synonymous SNV . 0 23 hm5C_associated_SNPs_61459 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:11139744-11139765
64251 chr19 10363088 10363088 1 + G T SARC 10363085 + 10363065 10363105 41 CCTTGCAGGGCCTGAGTTCCCTGGCGGAAGAGGCAGCGCGT CCTTGCAGGGCCTGAGTTCCCTGTCGGAAGAGGCAGCGCGT < 41bp 0.907418429037438 0.644265733058391 0.79630864 0.13070565 prediction 0.526305391958093 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10363085 chr19:10363088 nonsynonymous SNV 0.065 1 24 hm5C_associated_SNPs_61460 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:10363080-10363100
64251 chr19 14581662 14581662 1 + G T COAD 14581660 + 14581640 14581680 41 GTGAAGAAACAGCCCTTCTTCAGGGTGAGATTCCCCACAAG GTGAAGAAACAGCCCTTCTTCATGGTGAGATTCCCCACAAG < 41bp 0.871308017254378 0.608180078199958 0.9217421 0.3742744 prediction 0.52625587810884 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14581660 chr19:14581662 nonsynonymous SNV 0.791 2 23 hm5C_associated_SNPs_61462 0 0 7 DDX24 POSTAR2 ENCODE chr19:14581597-14581664
64251 chr12 53687096 53687096 1 + C T STAD 53687094 + 53687074 53687114 41 ATCTCTGGGATGTGACTGACCGCGACATTGACCGCTACACG ATCTCTGGGATGTGACTGACCGTGACATTGACCGCTACACG < 41bp 0.763127721654903 0.499420208495052 0.17465195 0.14124072 prediction 0.526255443309805 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53687094 chr12:53687096 synonymous SNV . 0 23 hm5C_associated_SNPs_61463 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:53687073-53687097
64251 chr7 150733680 150733680 1 + G T LIHC 150733678 + 150733658 150733698 41 GGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGGAGAC GGGGCTCCCTTGTGGCCGGACATCAGCTGACAGGGGGAGAC < 41bp 0.763125795898026 0.417430368457678 0.25252378 0.21616387 prediction 0.526251591796052 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150733678 chr7:150733680 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_61465 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:150733660-150733680
64251 chr5 23527786 23527786 1 + G T LUSC 23527783 + 23527763 23527803 41 GGGGAGAAGCCCTACGTCTGCAGGGAGTGTGGGCGGGGCTT GGGGAGAAGCCCTACGTCTGCAGTGAGTGTGGGCGGGGCTT < 41bp 0.916761397615537 0.653642683944317 0.87607515 0.23222056 prediction 0.52623742734244 Functional Loss - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527783 chr5:23527786 nonsynonymous SNV 0.137 0 24 hm5C_associated_SNPs_61466 0 0 1 LIN28B POSTAR2 ENCODE chr5:23527758-23527827
64251 chr7 99971834 99971834 1 + A C rs1859788 99971830 + 99971810 99971850 41 TCCTGGAGACGGGGCCACTTCCACAGGCAGTCCTTCTACAG TCCTGGAGACGGGGCCACTTCCACCGGCAGTCCTTCTACAG < 41bp 0.763094538090502 0.341848812903596 0.5900961 0.4071716 prediction 0.526189076181003 Functional Loss - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971830 chr7:99971834 synonymous SNV . 0 25 hm5C_associated_SNPs_61472 0 1 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99971805-99971835
64251 chr22 20939447 20939447 1 + C T PRAD 20939445 + 20939425 20939465 41 GATGATGAGCGGCAGAGCATCCCCAGTGTGCTCCAGGGTGA GATGATGAGCGGCAGAGCATCCTCAGTGTGCTCCAGGGTGA < 41bp 0.779121656679516 0.516030387001524 0.11780825 0.1278109 prediction 0.526182539355986 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20939445 chr22:20939447 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_61473 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:20939437-20939487
64251 chr19 57802649 57802649 1 + A T ESCA 57802645 + 57802625 57802665 41 TCACACGGCACCAGCGGACTCACAATGGAGATAAGCCCTTT TCACACGGCACCAGCGGACTCACATTGGAGATAAGCCCTTT < 41bp 0.861584621018712 0.59852184932544 0.09229085 0.03261864 prediction 0.526125543386544 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802645 chr19:57802649 nonsynonymous SNV 0.072 1 25 hm5C_associated_SNPs_61477 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57802418-57802692
64251 chrX 129499580 129499580 1 + G T LUSC 129499577 + 129499557 129499597 41 CCCGGTTGATGTGGTTCGAACTCGCATGATGAACCAGAGGG CCCGGTTGATGTGGTTCGAACTCTCATGATGAACCAGAGGG < 41bp 0.763060088155597 0.44660556564635 0.20278043 0.06388229 prediction 0.526120176311195 Functional Loss - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129499577 chrX:129499580 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_61479 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:129499575-129499599
64251 chr16 21973829 21973829 1 + G T LUAD 21973827 + 21973807 21973847 41 CTTATACTGTGGAATGCCTGCGGGGTGATGTGTAAGTACCT CTTATACTGTGGAATGCCTGCGTGGTGATGTGTAAGTACCT < 41bp 0.763059237578954 0.45013010588927 0.9047651 0.29119337 prediction 0.526118475157908 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21973827 chr16:21973829 synonymous SNV . 0 23 hm5C_associated_SNPs_61480 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:21973807-21973831
64251 chr16 31090321 31090321 1 + G C LUAD 31090317 + 31090297 31090337 41 CCTCTGTGGCATGATCTTCCCTGGGCGGGCTGGCTACAGGC CCTCTGTGGCATGATCTTCCCTGGCCGGGCTGGCTACAGGC < 41bp 0.763045482503621 0.477993561927712 0.63536096 0.4392155 prediction 0.526090965007242 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31090317 chr16:31090321 synonymous SNV . 0 25 hm5C_associated_SNPs_61482 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31090305-31090328
64251 chrX 48649603 48649603 1 + A T COAD 48649599 + 48649579 48649619 41 TGCTCTGGTGTCCTCCACACCAGAATCAGGGGTTTTCTTCC TGCTCTGGTGTCCTCCACACCAGATTCAGGGGTTTTCTTCC < 41bp 0.76302439634106 0.453111969673095 0.22397742 0.3714099 prediction 0.52604879268212 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48649599 chrX:48649603 nonsynonymous SNV 0.032 1 25 hm5C_associated_SNPs_61487 0 0 1 DHX30 POSTAR2 ENCODE chrX:48649573-48649613
64251 chr6 27100998 27100998 1 + G T BLCA 27100996 + 27100976 27101016 41 GCGGGTCGGGGCCGGCGCGCCGGTGTATCTGGCAGCGGTGC GCGGGTCGGGGCCGGCGCGCCGTTGTATCTGGCAGCGGTGC < 41bp 0.873729922420778 0.610708043361022 0.7238489 0.18293911 prediction 0.526043758119512 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100996 chr6:27100998 nonsynonymous SNV 0.982 1 23 hm5C_associated_SNPs_61489 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr19 17322900 17322900 1 + G C LUSC 17322899 + 17322879 17322919 41 CCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCTG CCACCTGCCTCGCTGGGCACCCGGTGCCCGGGAGGCGGCTG < 41bp 0.821959481477808 0.55894720789897 0.91648155 0.4435704 prediction 0.526024547157676 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322899 chr19:17322900 synonymous SNV . 0 22 hm5C_associated_SNPs_61492 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:17322895-17322919
64251 chrX 54837530 54837530 1 + C T UCEC 54837528 + 54837508 54837548 41 ATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCC ATCCCAAGAGCCTGAAGCACCATCACCTCGGGATGTGGCCC < 41bp 0.772638816598851 0.509633868276243 0.06051469 0.10209167 prediction 0.526009896645217 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837528 chrX:54837530 nonsynonymous SNV 0.951 1 23 hm5C_associated_SNPs_61493 0 0 1 RPS3 POSTAR2 ENCODE chrX:54837505-54837563
64251 chr7 856276 856276 1 + G T MESO 856274 + 856254 856294 41 AGCGTCTTCTCGGGCCTGGGCGGCGCAGACGAGGCCTGAGG AGCGTCTTCTCGGGCCTGGGCGTCGCAGACGAGGCCTGAGG < 41bp 0.762985604051185 0.432375223435389 0.77862453 0.39067936 prediction 0.525971208102369 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:856274 chr7:856276 synonymous SNV . 0 23 hm5C_associated_SNPs_61496 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:856273-856288
64251 chr14 56757051 56757051 1 + G T KIRC 56757049 + 56757029 56757069 41 GGCTCACTACTAATGGCGTCCTGGTGATGCATCCACGAGGG GGCTCACTACTAATGGCGTCCTTGTGATGCATCCACGAGGG < 41bp 0.762985494246847 0.419861944591177 0.32304952 0.24560502 prediction 0.525970988493694 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56757049 chr14:56757051 synonymous SNV . 0 23 hm5C_associated_SNPs_61497 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:56757030-56757054
64251 chr14 56757052 56757052 1 + G T KIRC 56757049 + 56757029 56757069 41 GGCTCACTACTAATGGCGTCCTGGTGATGCATCCACGAGGG GGCTCACTACTAATGGCGTCCTGTTGATGCATCCACGAGGG < 41bp 0.762985494246847 0.371781287979084 0.32304952 0.28182757 prediction 0.525970988493694 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56757049 chr14:56757052 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_61498 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:56757030-56757054
64251 chr2 187366132 187366132 1 + G T UCEC 187366129 + 187366109 187366149 41 GCGAAGTGTTTACATTGATGCAAGAGATGAAGAACTTGAAA GCGAAGTGTTTACATTGATGCAATAGATGAAGAACTTGAAA < 41bp 0.762964363711395 0.405484259641973 0.44553944 0.12779173 prediction 0.525928727422789 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187366129 chr2:187366132 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61503 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr2:187365999-187366152
64251 chr17 4624448 4624448 1 + A T rs149944273 4624444 + 4624424 4624464 41 CCCTCTTCCCTTCCCCTCACCTGGAAGCTTCTTCAACCAAT CCCTCTTCCCTTCCCCTCACCTGGTAGCTTCTTCAACCAAT < 41bp 0.819057414592615 0.556112117260118 0.210911 0.13101935 prediction 0.525890594664995 Functional Loss - ARRB2 ENSG00000141480 UTR3 Human protein_coding chr17:4624444 chr17:4624448 . . 0 25 hm5C_associated_SNPs_61506 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:4624402-4624450
64251 chr19 50040399 50040399 1 + A C LUSC 50040395 + 50040375 50040415 41 GGATGGGGACTCGATGGCCACTCGAGAGGAGCTGACAGCCT GGATGGGGACTCGATGGCCACTCGCGAGGAGCTGACAGCCT < 41bp 0.92593473858887 0.662992309370738 0.857248 0.06953797 prediction 0.525884858436262 Functional Loss - RCN3 ENSG00000142552 CDS Human protein_coding chr19:50040395 chr19:50040399 synonymous SNV . 0 25 hm5C_associated_SNPs_61507 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:50040387-50040430
64251 chr9 131008720 131008720 1 + G T LUAD 131008718 + 131008698 131008738 41 CTGTGGACAACCTCAAGCTGCGGGACGTGGAGAAGGGCTTT CTGTGGACAACCTCAAGCTGCGTGACGTGGAGAAGGGCTTT < 41bp 0.762937006002681 0.424638932202242 0.55714095 0.2149308 prediction 0.525874012005362 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131008718 chr9:131008720 synonymous SNV . 0 23 hm5C_associated_SNPs_61509 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131008705-131008735
64251 chr4 154216859 154216859 1 + C T STAD 154216857 + 154216837 154216877 41 ACCGGCAACGCCTACCTCACCGCCGAACTGAGCACCCCCGA ACCGGCAACGCCTACCTCACCGTCGAACTGAGCACCCCCGA < 41bp 0.768498924912202 0.505564241638549 0.3625489 0.17947814 prediction 0.525869366547305 Functional Loss - TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154216857 chr4:154216859 nonsynonymous SNV 0.851 3 23 hm5C_associated_SNPs_61510 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:154216840-154216860
64251 chr7 148451124 148451124 1 + G T UCEC 148451121 + 148451101 148451141 41 GTCAAACCAAGCACGAGGAGCTGGAGTTCCTCCTTCTAAGT GTCAAACCAAGCACGAGGAGCTGTAGTTCCTCCTTCTAAGT < 41bp 0.762923999312183 0.375743339804019 0.3631547 0.070988536 prediction 0.525847998624366 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148451121 chr7:148451124 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_61511 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148451078-148451129
64251 chr7 73790824 73790824 1 + G T KIRP 73790821 + 73790801 73790841 41 GGAGGCCCAGGAGGAGCTGGCTGGGCTGCAGCGGCACTGGC GGAGGCCCAGGAGGAGCTGGCTGTGCTGCAGCGGCACTGGC < 41bp 0.762922738431079 0.364566833113124 0.8883201 0.42286518 prediction 0.525845476862158 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790821 chr7:73790824 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_61512 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73790763-73790872
64251 chr6 148841011 148841011 1 + C T rs13196292 148841009 + 148840989 148841029 41 AGGGGGAGATGAAGAAGGGTCTCGGGTCCCTAAGCCACGGG AGGGGGAGATGAAGAAGGGTCTTGGGTCCCTAAGCCACGGG < 41bp 0.767904437332486 0.504984855816609 0.6395493 0.66792935 prediction 0.525839163031754 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148841009 chr6:148841011 synonymous SNV . 0 23 hm5C_associated_SNPs_61514 0 0 2 EFTUD2 POSTAR2 ENCODE chr6:148841011-148841079
64251 chr12 57884345 57884345 1 + G T THYM 57884343 + 57884323 57884363 41 GGAGGAGCTGGCTACCCTATCTGAGGAGGAGATTGCTATGG GGAGGAGCTGGCTACCCTATCTTAGGAGGAGATTGCTATGG < 41bp 0.762912036481102 0.424487419708495 0.33026454 0.04656434 prediction 0.525824072962203 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57884343 chr12:57884345 stopgain 0.993 0 23 hm5C_associated_SNPs_61515 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:57884318-57884345
64251 chr10 105778609 105778609 1 + G T UCEC 105778607 + 105778587 105778627 41 AAAAACACCAGCTGCTCAAACAGCAGCTTAAAGATCAGTAT AAAAACACCAGCTGCTCAAACATCAGCTTAAAGATCAGTAT < 41bp 0.762903572030201 0.443455810105035 0.3887851 0.11230439 prediction 0.525807144060403 Functional Loss - SLK ENSG00000065613 CDS Human protein_coding chr10:105778607 chr10:105778609 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61518 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:105778587-105778610
64251 chr15 67479715 67479715 1 + A C COAD 67479711 + 67479691 67479731 41 TGTTTTTGGCAGGATGCAACCTGAAGATCTTCAACAACCAG TGTTTTTGGCAGGATGCAACCTGACGATCTTCAACAACCAG < 41bp 0.762902503855422 0.348013774209879 0.17056343 0.2226246 prediction 0.525805007710844 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67479711 chr15:67479715 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_61519 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:67479707-67479745
64251 chr8 97506350 97506350 1 + G T rs116634740 97506347 + 97506327 97506367 41 GAGGAGGAAGCGAGCGCCCCCGAGCCCCGAGCCCGAGTCCC GAGGAGGAAGCGAGCGCCCCCGATCCCCGAGCCCGAGTCCC < 41bp 0.824910764071391 0.56201375919578 0.8093493 0.439036 prediction 0.525794009751222 Functional Loss - SDC2 ENSG00000169439 UTR5 Human protein_coding chr8:97506347 chr8:97506350 . . 0 24 hm5C_associated_SNPs_61520 0 0 8 EIF3B POSTAR2 GSE65004,GSM1585667 chr8:97506340-97506360
64251 chr5 102611898 102611898 1 + C T SKCM 102611896 + 102611876 102611916 41 GAAGCCATGCCATCCTTACGCTCCAAACAGCTAGATGCAGG GAAGCCATGCCATCCTTACGCTTCAAACAGCTAGATGCAGG < 41bp 0.799345325647847 0.53648977341756 0.42439115 0.03928387 prediction 0.525711104460574 Functional Loss - C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102611896 chr5:102611898 nonsynonymous SNV 0.827 1 23 hm5C_associated_SNPs_61529 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:102611880-102611940
64251 chr7 75610443 75610443 1 + C T ESCA 75610441 + 75610421 75610461 41 TGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTT TGGACAAGCGGCTGGAGCAGCTTGGCGCCCAGCGCATCTTT < 41bp 0.766454947049231 0.503605154312661 0.37006187 0.28411368 prediction 0.52569958547314 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75610441 chr7:75610443 synonymous SNV . 0 23 hm5C_associated_SNPs_61532 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:75610428-75610452
64251 chr16 68379639 68379639 1 + G C LUAD 68379635 + 68379615 68379655 41 CACAAGAGGAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTG CACAAGAGGAGCCTGTGGTGCAGGCCTCAGCGCTCTATCTG < 41bp 0.824802878414942 0.561953937031516 0.8886348 0.8430407 prediction 0.525697882766852 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68379635 chr16:68379639 nonsynonymous SNV 0.857 4 25 hm5C_associated_SNPs_61533 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:68379619-68379680
64251 chr3 10183767 10183767 1 + G C KIRC 10183766 + 10183746 10183786 41 CCCAGGTCATCTTCTGCAATCGCAGTCCGCGCGTCGTGCTG CCCAGGTCATCTTCTGCAATCCCAGTCCGCGCGTCGTGCTG < 41bp 0.762840440880342 0.451449755178838 0.7527647 0.18604079 prediction 0.525680881760685 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10183766 chr3:10183767 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_61536 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:10183720-10183808
64251 chr16 2287441 2287441 1 + G T HNSC 2287438 + 2287418 2287458 41 ACCCCGAGGACGTCTTCAGCCGCGAGCCCTTCGTGGTCAAG ACCCCGAGGACGTCTTCAGCCGCTAGCCCTTCGTGGTCAAG < 41bp 0.906333718445508 0.643499607550502 0.2965876 0.100526005 prediction 0.525668221790012 Functional Loss - DNASE1L2 ENSG00000167968 CDS Human protein_coding chr16:2287438 chr16:2287441 stopgain 0.941 1 24 hm5C_associated_SNPs_61540 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr16:2287440-2287460
64251 chr7 12692317 12692317 1 + G T LUAD 12692314 + 12692294 12692334 41 CCACATTCACAGGCTGGTTCCTGGGCTGGGATTCCAGCAAG CCACATTCACAGGCTGGTTCCTGTGCTGGGATTCCAGCAAG < 41bp 0.762832194424727 0.379761223641019 0.5819534 0.18529105 prediction 0.525664388849455 Functional Loss - SCIN ENSG00000006747 CDS Human protein_coding chr7:12692314 chr7:12692317 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_61541 0 0 1 LARP4 POSTAR2 ENCODE chr7:12692265-12692319
64251 chr2 201758064 201758064 1 + G T READ 201758061 + 201758041 201758081 41 AATTCAACGTTAACTACACCCAAGACCTGGACAAAGTCATG AATTCAACGTTAACTACACCCAATACCTGGACAAAGTCATG < 41bp 0.762825472976326 0.374290378501905 0.088850975 0.01753351 prediction 0.525650945952652 Functional Loss - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201758061 chr2:201758064 nonsynonymous SNV 0.831 2 24 hm5C_associated_SNPs_61544 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201758020-201758087
64251 chr1 211451575 211451575 1 + G T LUAD 211451573 + 211451553 211451593 41 AACTAGCTAATAGACATAATCAGGGTGACAGGTAGGTTGGT AACTAGCTAATAGACATAATCATGGTGACAGGTAGGTTGGT < 41bp 0.762821896037553 0.431724485796824 0.95832926 0.91711533 prediction 0.525643792075106 Functional Loss - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211451573 chr1:211451575 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_61545 0 0 1 BUD13 POSTAR2 ENCODE chr1:211451544-211451607
64251 chr17 4836097 4836097 1 - C A COAD 4836100 - 4836080 4836120 41 GTGAGGCGAGTGTAAGGCATCAGGGTTGCCAGGGAGAAGGT GTGAGGCGAGTGTAAGGCATCAGTGTTGCCAGGGAGAAGGT < 41bp 0.899262640772933 0.636458463482045 0.9289154 0.108249456 prediction 0.525608354581777 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836100 chr17:4836097 synonymous SNV . 0 24 hm5C_associated_SNPs_61546 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr17:4836075-4836106
64251 chr19 12296976 12296976 1 + G T UCEC 12296973 + 12296953 12296993 41 TTAAAGATCACTACAAACACCGAGGGAGAAATCTAAGGTAA TTAAAGATCACTACAAACACCGATGGAGAAATCTAAGGTAA < 41bp 0.762803065778682 0.397963173897999 0.8974167 0.073500216 prediction 0.525606131557365 Functional Loss - ZNF136 ENSG00000196646 CDS Human protein_coding chr19:12296973 chr19:12296976 nonsynonymous SNV 0.874 1 24 hm5C_associated_SNPs_61547 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:12296953-12296982
64251 chr1 33959142 33959142 1 + G T STAD 33959140 + 33959120 33959160 41 GTAGTGCTGAGACTGATGCCCAGGAGGCCTGGGGTGAAGTG GTAGTGCTGAGACTGATGCCCATGAGGCCTGGGGTGAAGTG < 41bp 0.880757704866238 0.617960401303906 0.8806058 0.13320544 prediction 0.525594607124664 Functional Loss - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33959140 chr1:33959142 nonsynonymous SNV 0.011 0 23 hm5C_associated_SNPs_61550 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:33959126-33959164
64251 chr16 67576217 67576217 1 + G T THCA 67576214 + 67576194 67576234 41 ACTCTGCCACAAGCTCTACCCTCGGTACAACAGGCTCTGTC ACTCTGCCACAAGCTCTACCCTCTGTACAACAGGCTCTGTC < 41bp 0.762782186001697 0.373974887757395 0.22207418 0.077429175 prediction 0.525564372003394 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67576214 chr16:67576217 nonsynonymous SNV 0.090 1 24 hm5C_associated_SNPs_61553 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:67576206-67576246
64251 chr10 12142226 12142226 1 + C T LGG 12142224 + 12142204 12142244 41 ATCAAGCTAGACTGGGCCACCGCGGAAGCTCTTGCCTTGGG ATCAAGCTAGACTGGGCCACCGTGGAAGCTCTTGCCTTGGG < 41bp 0.772007660508423 0.509241379501598 0.82941186 0.7552448 prediction 0.525532562013649 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12142224 chr10:12142226 nonsynonymous SNV 0.668 5 23 hm5C_associated_SNPs_61555 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr10:12142225-12142226
64251 chr16 20926975 20926975 1 + C T rs531105424 20926973 + 20926953 20926993 41 ACATCAGGGCAGATGGAAGACACCATCAAAGAAAAACAGTA ACATCAGGGCAGATGGAAGACATCATCAAAGAAAAACAGTA < 41bp 0.797653371930948 0.534891840427491 0.21623564 0.07705513 prediction 0.525523063006913 Functional Loss - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20926973 chr16:20926975 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61556 0 0 1 ZNF622 POSTAR2 ENCODE chr16:20926895-20926975
64251 chr1 154246017 154246017 1 + G T COAD 154246014 + 154245994 154246034 41 TCGGCTTTGATGACCTAGTACGAGATTTCAATAGCATCTTC TCGGCTTTGATGACCTAGTACGATATTTCAATAGCATCTTC < 41bp 0.84693819611476 0.584177295314376 0.6319413 0.0919953 prediction 0.525521801600769 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154246014 chr1:154246017 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_61557 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:154245981-154246041
64251 chr7 7612969 7612969 1 + G T LUSC 7612966 + 7612946 7612986 41 TGGTCTACTTGCCACTTTAACAAGGGATAGTAATATTATTA TGGTCTACTTGCCACTTTAACAATGGATAGTAATATTATTA < 41bp 0.762759601408577 0.393857531698152 0.90489125 0.22594768 prediction 0.525519202817154 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7612966 chr7:7612969 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61558 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:7612949-7612985
64251 chr16 2815822 2815822 1 + C T UCEC 2815820 + 2815800 2815840 41 AAGGAGAGGCCGCTCTCCTTCGCCAAAGCCTCGTGGACTCC AAGGAGAGGCCGCTCTCCTTCGTCAAAGCCTCGTGGACTCC < 41bp 0.762756450382352 0.494098972615129 0.254098 0.14618188 prediction 0.525512900764703 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815820 chr16:2815822 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_61559 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2815622-2815878
64251 chr1 201958062 201958062 1 + G T BLCA 201958060 + 201958040 201958080 41 GTTGGCTCCCGAGCAGACAGCAGGAAAGAAGAAGCCCTTCG GTTGGCTCCCGAGCAGACAGCATGAAAGAAGAAGCCCTTCG < 41bp 0.879480826928867 0.61672937386955 0.781476 0.15341267 prediction 0.525502906118634 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201958060 chr1:201958062 stopgain 1.000 1 23 hm5C_associated_SNPs_61560 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:201958055-201958080
64251 chr11 75277965 75277965 1 + G C LUAD 75277961 + 75277941 75277981 41 GGCAAGCTGCCCGAGGTCACCAAGGACGTGGAGCGCACGGA GGCAAGCTGCCCGAGGTCACCAAGCACGTGGAGCGCACGGA < 41bp 0.791643529937092 0.528900501271447 0.8499465 0.48158938 prediction 0.52548605733129 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277961 chr11:75277965 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_61561 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:75277942-75277980
64251 chr2 109399276 109399276 1 + G T UCEC 109399273 + 109399253 109399293 41 GGAGAGAAAGGCTTTGGTTTCAAGAATTCCATTTTTCACAG GGAGAGAAAGGCTTTGGTTTCAATAATTCCATTTTTCACAG < 41bp 0.762737213344102 0.420185004540755 0.4323018 0.26993698 prediction 0.525474426688205 Functional Loss - RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109399273 chr2:109399276 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_61562 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109399140-109399293
64251 chr19 35655093 35655093 1 + G C BLCA 35655089 + 35655069 35655109 41 TGATGACACCACGACGCTCTCTGAGAGACCATCCCCAAGCA TGATGACACCACGACGCTCTCTGACAGACCATCCCCAAGCA < 41bp 0.815010838496548 0.552295818269943 0.5133938 0.14386687 prediction 0.52543004045321 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35655089 chr19:35655093 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_61567 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:35655089-35655101
64251 chr8 121463274 121463274 1 + G T UCEC 121463271 + 121463251 121463291 41 GTGGGAGGTATACCTGGTTCCAAGAAGTGGTTCTTTGCAGT GTGGGAGGTATACCTGGTTCCAATAAGTGGTTCTTTGCAGT < 41bp 0.762711923523959 0.397939496040125 0.41188318 0.21630079 prediction 0.525423847047917 Functional Loss - MTBP ENSG00000172167 CDS Human protein_coding chr8:121463271 chr8:121463274 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_61569 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:121463260-121463359
64251 chr6 26204991 26204991 1 + G C ESCA 26204990 + 26204970 26205010 41 CTGCCATCCGGCGCCTTGCTCGTCGCGGGGGTGTCAAGCGC CTGCCATCCGGCGCCTTGCTCCTCGCGGGGGTGTCAAGCGC < 41bp 0.762702717195877 0.451626423986116 0.8511127 0.24534869 prediction 0.525405434391755 Functional Loss - HIST1H4E ENSG00000198518 CDS Human other chr6:26204990 chr6:26204991 nonsynonymous SNV 0.025 0 22 hm5C_associated_SNPs_61571 0 0 37 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:26204840-26205000
64251 chr8 76472634 76472634 1 + A T rs139324425 76472630 + 76472610 76472650 41 TCCAATGCATCCACATTTGTCTCAAGACCCATTAACTGGAC TCCAATGCATCCACATTTGTCTCATGACCCATTAACTGGAC < 41bp 0.762695232275142 0.42935473042433 0.21017984 0.107966095 prediction 0.525390464550285 Functional Loss - HNF4G ENSG00000164749 CDS Human protein_coding chr8:76472630 chr8:76472634 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_61573 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:76472619-76472647
64251 chr14 29237355 29237355 1 + G C LUSC 29237354 + 29237334 29237374 41 GCTGGCCTTCAAGCGCGGTGCGCGCCTCACCTCCACCGGCC GCTGGCCTTCAAGCGCGGTGCCCGCCTCACCTCCACCGGCC < 41bp 0.843762073114696 0.58107991259738 0.18295774 0.056165725 prediction 0.525364321034632 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237354 chr14:29237355 synonymous SNV . 0 22 hm5C_associated_SNPs_61576 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:29237353-29237379
64251 chr10 99625466 99625466 1 + G T UCEC 99625463 + 99625443 99625483 41 GCGGGGGCCCGGTGACTGGCCGAGAGTCCCTGTAGGGAGGT GCGGGGGCCCGGTGACTGGCCGATAGTCCCTGTAGGGAGGT < 41bp 0.899382914105296 0.636708149544974 0.34799802 0.061711878 prediction 0.525349529120643 Functional Loss - CRTAC1 ENSG00000095713 CDS Human protein_coding chr10:99625463 chr10:99625466 nonsynonymous SNV 0.980 0 24 hm5C_associated_SNPs_61581 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:99625458-99625507
64251 chr15 22933765 22933765 1 + C T UCEC 22933763 + 22933743 22933783 41 TTCAGTCTCTGCAGCAGCAGCTCGAAGTGATTTCTGGCTAC TTCAGTCTCTGCAGCAGCAGCTTGAAGTGATTTCTGGCTAC < 41bp 0.762669229805171 0.478255707443533 0.5688276 0.39733112 prediction 0.525338459610342 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22933763 chr15:22933765 synonymous SNV . 0 23 hm5C_associated_SNPs_61582 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:22933746-22933779
64251 chr16 68387414 68387414 1 + G C LAML 68387410 + 68387390 68387430 41 CACAGGACCTGTGGCGGATCCGGAGCCCCTGTGGTGACTGC CACAGGACCTGTGGCGGATCCGGACCCCCTGTGGTGACTGC < 41bp 0.80638530286801 0.54371729271764 0.8381698 0.37234646 prediction 0.525336020300739 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68387410 chr16:68387414 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_61583 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:68387395-68387416
64251 chr2 74683363 74683363 1 + G T COAD 74683360 + 74683340 74683380 41 CTGGATGACAATGGAGACCTCAAGAAGGAGATCAATGAGCG CTGGATGACAATGGAGACCTCAATAAGGAGATCAATGAGCG < 41bp 0.762666293655591 0.378388048005406 0.760686 0.3239553 prediction 0.525332587311183 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74683360 chr2:74683363 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61584 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:74683343-74683363
64251 chr5 147593512 147593512 1 + A T LUSC 147593508 + 147593488 147593528 41 TTCCAGGACCCCAAGGTCTACTGCACTCGGGAATCTAACCC TTCCAGGACCCCAAGGTCTACTGCTCTCGGGAATCTAACCC < 41bp 0.87105485374628 0.608392896600384 0.23113972 0.1542491 prediction 0.525323914291792 Functional Loss - SPINK6 ENSG00000178172 CDS Human protein_coding chr5:147593508 chr5:147593512 nonsynonymous SNV 0.988 3 25 hm5C_associated_SNPs_61586 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:147593460-147593520
64251 chr3 128627045 128627045 1 + C T CESC 128627043 + 128627023 128627063 41 CACAGGGAACCAATGAGATTCTCCGGATGTACATCGCCCTG CACAGGGAACCAATGAGATTCTTCGGATGTACATCGCCCTG < 41bp 0.762637365167854 0.486748944135155 0.13765118 0.12227845 prediction 0.525274730335709 Functional Loss - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128627043 chr3:128627045 synonymous SNV . 0 23 hm5C_associated_SNPs_61589 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:128627033-128627051
64251 chr16 57269076 57269076 1 + G T UCEC 57269073 + 57269053 57269093 41 TGTTGAAGCAAGTCAGTATCCGAGAAAACTGCTGTTCCCTT TGTTGAAGCAAGTCAGTATCCGATAAAACTGCTGTTCCCTT < 41bp 0.901610293156477 0.638975616535595 0.6470242 0.16816401 prediction 0.525269353241764 Functional Loss - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57269073 chr16:57269076 stopgain 0.999 1 24 hm5C_associated_SNPs_61590 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57269054-57269103
64251 chr19 57803073 57803073 1 + A C LUSC 57803069 + 57803049 57803089 41 CCTGCATGAAAGAGCCCACACTGGAGAAAAGCCTTTTGAGT CCTGCATGAAAGAGCCCACACTGGCGAAAAGCCTTTTGAGT < 41bp 0.762623808617935 0.364275137637575 0.118893415 0.12315613 prediction 0.525247617235869 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57803069 chr19:57803073 synonymous SNV . 0 25 hm5C_associated_SNPs_61594 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:57803028-57803079
64251 chr16 31927691 31927691 1 + G T LIHC 31927689 + 31927669 31927709 41 GGTCATACCTCACTACACATCGGAGAAGTCATAGTGGAGAG GGTCATACCTCACTACACATCGTAGAAGTCATAGTGGAGAG < 41bp 0.762617113648548 0.437824080187454 0.7232444 0.11067003 prediction 0.525234227297096 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927689 chr16:31927691 synonymous SNV . 0 23 hm5C_associated_SNPs_61595 0 0 1 UCHL5 POSTAR2 ENCODE chr16:31927597-31927708
64251 chr8 145748780 145748780 1 + G T SARC 145748778 + 145748758 145748798 41 GCCAGTGCAGGGCGCAGTCACAGCGCCATGGGTTCTCTGTG GCCAGTGCAGGGCGCAGTCACATCGCCATGGGTTCTCTGTG < 41bp 0.762610093789403 0.444777132271666 0.89085245 0.32020953 prediction 0.525220187578805 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145748778 chr8:145748780 synonymous SNV . 0 23 hm5C_associated_SNPs_61596 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr8:145748780-145748800
64251 chr19 17888985 17888985 1 + G T UCEC 17888982 + 17888962 17889002 41 CAGTCAGAGGAGCAGGTGTCCAAGAACCTCTTTGGGCCGCC CAGTCAGAGGAGCAGGTGTCCAATAACCTCTTTGGGCCGCC < 41bp 0.762605892492818 0.367788960206055 0.87900376 0.18079585 prediction 0.525211784985637 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17888982 chr19:17888985 nonsynonymous SNV 0.974 0 24 hm5C_associated_SNPs_61597 0 0 2 DDX24 POSTAR2 ENCODE chr19:17888951-17889024
64251 chr22 20909296 20909296 1 + G C THCA 20909292 + 20909272 20909312 41 CGCTGGAATTGGCATGCCTCCTCGGGGCCCGGGACAGTCTC CGCTGGAATTGGCATGCCTCCTCGCGGCCCGGGACAGTCTC < 41bp 0.77392397163427 0.511338659289658 0.37925777 0.2367903 prediction 0.525170624689224 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20909292 chr22:20909296 synonymous SNV . 0 25 hm5C_associated_SNPs_61602 0 0 4 BUD13 POSTAR2 ENCODE chr22:20909201-20909298
64251 chr2 114391783 114391783 1 + C T COAD 114391781 + 114391761 114391801 41 ACCCTGTACAAGCACACAGCCACGGTAGATGGCAAGACCAT ACCCTGTACAAGCACACAGCCATGGTAGATGGCAAGACCAT < 41bp 0.781490289045609 0.518907070023683 0.049664587 0.1027146 prediction 0.525166438043851 Functional Loss - RABL2A ENSG00000144134 CDS Human protein_coding chr2:114391781 chr2:114391783 nonsynonymous SNV 0.935 2 23 hm5C_associated_SNPs_61603 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:114391770-114391796
64251 chr3 139062911 139062911 1 + A T LIHC 139062907 + 139062887 139062927 41 ACTGTATTGCTGTGGAGCCTCTTGAGGAGTTCTCCGGGCGT ACTGTATTGCTGTGGAGCCTCTTGTGGAGTTCTCCGGGCGT < 41bp 0.830524286948761 0.567973499667806 0.54991746 0.27003187 prediction 0.525101574561911 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062907 chr3:139062911 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_61607 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:139062892-139062929
64251 chr1 44440769 44440769 1 + G C rs2286241 44440768 + 44440748 44440788 41 CGTGGCCTTCTGGGCCTGCGCGCTGGCCGTGGGTGAGGCCG CGTGGCCTTCTGGGCCTGCGCCCTGGCCGTGGGTGAGGCCG < 41bp 0.762544778044916 0.461988108021756 0.80244875 0.40858442 prediction 0.525089556089833 Functional Loss - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44440768 chr1:44440769 synonymous SNV . 0 22 hm5C_associated_SNPs_61608 0 1 21 TARDBP POSTAR2 DRA001158,DRS012386 chr1:44440749-44440776
64251 chr19 5047543 5047543 1 + C T READ 5047541 + 5047521 5047561 41 CCATCCTGGACATGGTGGAGCGCGAGTGCGGCACCATCATC CCATCCTGGACATGGTGGAGCGTGAGTGCGGCACCATCATC < 41bp 0.767216122023906 0.504677661514803 0.42930686 0.40158045 prediction 0.525076921018207 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5047541 chr19:5047543 synonymous SNV . 0 23 hm5C_associated_SNPs_61610 0 0 5 FMR1 POSTAR2 ENCODE chr19:5047485-5047564
64251 chr1 32692093 32692093 1 + G T LAML 32692091 + 32692071 32692111 41 CCTGGGGGAGTGCATCATCGCTGGCCATGAGAGTGGAGAGC CCTGGGGGAGTGCATCATCGCTTGCCATGAGAGTGGAGAGC < 41bp 0.762529357621233 0.426314832743626 0.238974 0.061349064 prediction 0.525058715242466 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32692091 chr1:32692093 nonsynonymous SNV 0.880 5 23 hm5C_associated_SNPs_61611 0 0 27 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:32692020-32692098
64251 chr5 131796387 131796387 1 + G T LUAD 131796384 + 131796364 131796404 41 TGCTGCTTACAGCCAAGATTCTGGAAAGAAATGTCTCCTTT TGCTGCTTACAGCCAAGATTCTGTAAAGAAATGTCTCCTTT < 41bp 0.76249808139747 0.395892554521895 0.111968964 0.04383287 prediction 0.524996162794939 Functional Loss - C5orf56 ENSG00000197536 CDS Human protein_coding chr5:131796384 chr5:131796387 nonsynonymous SNV 0.141 3 24 hm5C_associated_SNPs_61616 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:131796367-131796401
64251 chr20 60847245 60847245 1 + C T COAD 60847243 + 60847223 60847263 41 CTGAGCTTCTTGCAGCGGATCACGGAGTACATGGAGCACGT CTGAGCTTCTTGCAGCGGATCATGGAGTACATGGAGCACGT < 41bp 0.767931291911607 0.505439805128201 0.8106741 0.49418083 prediction 0.524982973566813 Functional Loss - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60847243 chr20:60847245 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_61617 0 0 3 PRPF8 POSTAR2 ENCODE chr20:60847231-60847359
64251 chr11 94731244 94731244 1 + G C LUSC 94731240 + 94731220 94731260 41 GGAGCTCTTCCCAGGCAGTTCCCGGGGTTGTGGGGCCTTCC GGAGCTCTTCCCAGGCAGTTCCCGCGGTTGTGGGGCCTTCC < 41bp 0.762489886484295 0.475744232678134 0.89688706 0.5773557 prediction 0.524979772968589 Functional Loss - KDM4D ENSG00000186280 CDS Human protein_coding chr11:94731240 chr11:94731244 synonymous SNV . 0 25 hm5C_associated_SNPs_61618 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:94731223-94731246
64251 chr15 43641179 43641179 1 + C T LUAD 43641177 + 43641157 43641197 41 GAATCGGGCATGGAACATTTCTCAACTCCGGTGAGGGAGGA GAATCGGGCATGGAACATTTCTTAACTCCGGTGAGGGAGGA < 41bp 0.834864900633552 0.572401367451083 0.10723752 0.08354366 prediction 0.524927066364938 Functional Loss - ADAL ENSG00000168803 CDS Human protein_coding chr15:43641177 chr15:43641179 synonymous SNV . 0 23 hm5C_associated_SNPs_61622 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:43641157-43641186
64251 chr11 126225916 126225916 1 + G C rs529722276 126225912 + 126225892 126225932 41 CAGCCCTGCGGAGCTGCTTTCCGGGGTCCCTTTCCCTGGAC CAGCCCTGCGGAGCTGCTTTCCGGCGTCCCTTTCCCTGGAC < 41bp 0.805105651552226 0.542642372753077 0.9477986 0.91435254 prediction 0.524926557598299 Functional Loss - ST3GAL4 ENSG00000110080 UTR5 Human protein_coding chr11:126225912 chr11:126225916 . . 0 25 hm5C_associated_SNPs_61623 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:126225901-126225922
64251 chr10 21823681 21823681 1 + G T UCEC 21823678 + 21823658 21823698 41 TCAGACGAGAGAGGCTGGGCCGAGAACCCGCTGGTTTATTG TCAGACGAGAGAGGCTGGGCCGATAACCCGCTGGTTTATTG < 41bp 0.881623045284098 0.619168190200833 0.81595194 0.37245256 prediction 0.52490971016653 Functional Loss - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:21823678 chr10:21823681 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_61625 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:21823621-21823693
64251 chr3 111732311 111732311 1 + G T UCEC 111732309 + 111732289 111732329 41 AGGAGCAGCTTCGCCAGGGACAGAACGTAATAGGCCTGCAG AGGAGCAGCTTCGCCAGGGACATAACGTAATAGGCCTGCAG < 41bp 0.866853873016306 0.604409951674621 0.20198229 0.21741953 prediction 0.52488784268337 Functional Loss - TAGLN3 ENSG00000144834 CDS Human protein_coding chr3:111732309 chr3:111732311 stopgain 1.000 1 23 hm5C_associated_SNPs_61628 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:111732296-111732315
64251 chr7 143001855 143001855 1 + C T STAD 143001853 + 143001833 143001873 41 CTGAGCGGGCTTGTGATATGCACGTGGCCGACATGCTGGTT CTGAGCGGGCTTGTGATATGCATGTGGCCGACATGCTGGTT < 41bp 0.767341026358345 0.504902324364126 0.52246296 0.41923168 prediction 0.52487740398844 Functional Loss - CASP2 ENSG00000106144 CDS Human protein_coding chr7:143001853 chr7:143001855 synonymous SNV . 0 23 hm5C_associated_SNPs_61629 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:143001830-143001861
64251 chr19 58805598 58805598 1 + G C CESC 58805594 + 58805574 58805614 41 CCCACCACGTTAGGGAAAGACAGGGAGTGTCAGAGCCAGAG CCCACCACGTTAGGGAAAGACAGGCAGTGTCAGAGCCAGAG < 41bp 0.822595280741871 0.560173130208665 0.83588254 0.4102999 prediction 0.524844301066412 Functional Loss - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58805594 chr19:58805598 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_61632 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58805550-58805607
64251 chr9 117020836 117020836 1 + C T GBM 117020834 + 117020814 117020854 41 TTCCCAGGGTCCTCCAGGATCTCGAGGCCCACCAGGCATGA TTCCCAGGGTCCTCCAGGATCTTGAGGCCCACCAGGCATGA < 41bp 0.770150025350667 0.507734278887331 0.7226463 0.26983172 prediction 0.524831492926672 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117020834 chr9:117020836 stopgain 1.000 0 23 hm5C_associated_SNPs_61633 0 0 7 BUD13 POSTAR2 ENCODE chr9:117020820-117020854
64251 chr3 44700284 44700284 1 + G T UCEC 44700282 + 44700262 44700302 41 TCATCATATCAGAAAGAATCCAGAAAGCTGATCCTCAAGGA TCATCATATCAGAAAGAATCCATAAAGCTGATCCTCAAGGA < 41bp 0.762396063895457 0.4476288567099 0.33677447 0.057943255 prediction 0.524792127790914 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700282 chr3:44700284 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_61637 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:44700277-44700325
64251 chr4 57883784 57883784 1 + C T UCEC 57883782 + 57883762 57883802 41 CAGGCTATGGGAGTTTACATCACCAACTTCCATGTTCGCAT CAGGCTATGGGAGTTTACATCATCAACTTCCATGTTCGCAT < 41bp 0.821485120251844 0.559096812298158 0.11934438 0.05575469 prediction 0.524776615907371 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57883782 chr4:57883784 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61639 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:57883762-57883795
64251 chr1 109635586 109635586 1 + C T BLCA 109635584 + 109635564 109635604 41 TGCCTACTTCAAGAAAGTACCTCGTCTCAAAACCTGGCTGC TGCCTACTTCAAGAAAGTACCTTGTCTCAAAACCTGGCTGC < 41bp 0.774373653842182 0.511991032503935 0.43573135 0.36796454 prediction 0.524765242676494 Functional Loss - TMEM167B ENSG00000215717 CDS Human protein_coding chr1:109635584 chr1:109635586 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_61641 0 0 3 DDX3X POSTAR2 ENCODE chr1:109635544-109635591
64251 chr8 144733032 144733032 1 + G T OV 144733030 + 144733010 144733050 41 AGTGTGGGAAAGCCTTTATTCGGAGTTCAAAGCTCATTCAG AGTGTGGGAAAGCCTTTATTCGTAGTTCAAAGCTCATTCAG < 41bp 0.871809890010848 0.60942947665323 0.9454438 0.8067857 prediction 0.524760826715236 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144733030 chr8:144733032 synonymous SNV . 0 23 hm5C_associated_SNPs_61643 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:144733027-144733062
64251 chr1 95428631 95428631 1 + A C rs183910396 95428627 + 95428607 95428647 41 CTACGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAG CTACGTTGAAAAGCCTTTGACCACCGTGCAGGGAGCAGAAG < 41bp 0.762367051661133 0.374269700658149 0.07113612 0.105724365 prediction 0.524734103322266 Functional Loss - LOC729970 ENSG00000235501 ncRNA_exonic Human antisense chr1:95428627 chr1:95428631 . . 0 25 hm5C_associated_SNPs_61648 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:95428616-95428656
64251 chr11 82879809 82879809 1 + G C LUAD 82879805 + 82879785 82879825 41 CTTTGAGATTTGAGGGGCCACAAGGTCAGCTAGGAGGTGGG CTTTGAGATTTGAGGGGCCACAAGCTCAGCTAGGAGGTGGG < 41bp 0.789976482283087 0.527612046104884 0.47050652 0.1495808 prediction 0.524728872356405 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82879805 chr11:82879809 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_61650 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:82879780-82879820
64251 chr1 29069845 29069845 1 + C T HNSC 29069843 + 29069823 29069863 41 GCCAACCCGCTGGGTAGCACCTCGGAACCGTGGCAGTGGGT GCCAACCCGCTGGGTAGCACCTTGGAACCGTGGCAGTGGGT < 41bp 0.787208218268196 0.524847729028787 0.16684452 0.09587875 prediction 0.524720978478819 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069843 chr1:29069845 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61652 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:29069818-29069893
64251 chr17 48551331 48551331 1 + C T UCEC 48551329 + 48551309 48551349 41 CTGAAGGACGGGGAGGAGACCACGGTGGAGGAGATAAAAGC CTGAAGGACGGGGAGGAGACCATGGTGGAGGAGATAAAAGC < 41bp 0.76371061868604 0.501363267108477 0.8333997 0.5194246 prediction 0.524694703155127 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48551329 chr17:48551331 nonsynonymous SNV 0.004 4 23 hm5C_associated_SNPs_61657 0 0 5 GRWD1 POSTAR2 ENCODE chr17:48551289-48551343
64251 chr15 81041869 81041869 1 + C T rs114503157 81041867 + 81041847 81041887 41 TCTCCAGGTATGGCGTGAGTCCCGAGAACATTATCCTCTAT TCTCCAGGTATGGCGTGAGTCCTGAGAACATTATCCTCTAT < 41bp 0.803384115355283 0.541041870632943 0.2371121 0.29534924 prediction 0.524684489444679 Functional Loss - ABHD17C ENSG00000136379 CDS Human protein_coding chr15:81041867 chr15:81041869 synonymous SNV . 0 23 hm5C_associated_SNPs_61659 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:81041855-81041873
64251 chr8 97307406 97307406 1 + G T LUAD 97307403 + 97307383 97307423 41 ATTTTTGCATTTGGACATTTCTGGGGCTGGGCCATGAAGGC ATTTTTGCATTTGGACATTTCTGTGGCTGGGCCATGAAGGC < 41bp 0.913288236157064 0.650963691461379 0.8185142 0.3085277 prediction 0.52464908939137 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97307403 chr8:97307406 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_61660 0 0 17 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:97307380-97307412
64251 chr3 128621412 128621412 1 + T C LIHC 128621411 + 128621391 128621431 41 TGCAGGTGGCCATGAACATCCTCAACAGCGGCCGGTTCAGC TGCAGGTGGCCATGAACATCCCCAACAGCGGCCGGTTCAGC < 41bp 0.768958734832921 0.506634338711031 0.17876858 0.12414691 prediction 0.524648792243781 Functional Loss - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128621411 chr3:128621412 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_61661 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:128621404-128621430
64251 chr17 57289759 57289759 1 + G T ESCA 57289756 + 57289736 57289776 41 GCTATATCACAATAGCCGAGCTCGATCTACTGGTGCTTGCA GCTATATCACAATAGCCGAGCTCTATCTACTGGTGCTTGCA < 41bp 0.762305740851376 0.381417113073246 0.24417916 0.593288 prediction 0.524611481702752 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57289756 chr17:57289759 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_61667 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr17:57289740-57289760
64251 chr9 34656778 34656778 1 + C T SKCM 34656776 + 34656756 34656796 41 GGGATGGGGAGCCAAAGCTGCTCCAGGGACCTGACTCTGGG GGGATGGGGAGCCAAAGCTGCTTCAGGGACCTGACTCTGGG < 41bp 0.816960976924684 0.554656185667488 0.9306354 0.40609592 prediction 0.524609582514392 Functional Loss - IL11RA ENSG00000137070;ENSG00000258728 CDS Human other chr9:34656776 chr9:34656778 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_61668 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:34656773-34656802
64251 chr19 42791806 42791806 1 + G T LGG 42791804 + 42791784 42791824 41 AACCAGGACAACCGGACCGTCAGCAAGATCCTGGGCGAGTG AACCAGGACAACCGGACCGTCATCAAGATCCTGGGCGAGTG < 41bp 0.762303967744698 0.42174478921424 0.10954979 0.019826442 prediction 0.524607935489397 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791804 chr19:42791806 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61669 0 0 2 NOP58 POSTAR2 GSE43666,GSM1067862 chr19:42791776-42791812
64251 chr10 103917203 103917203 1 + G C UCEC 103917202 + 103917182 103917222 41 GTTCAGCTGTACCTGCCAAGCGAGTCGGTCTGCCTCCTGGG GTTCAGCTGTACCTGCCAAGCCAGTCGGTCTGCCTCCTGGG < 41bp 0.762286830038971 0.447955179883203 0.26878494 0.2541129 prediction 0.524573660077943 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917202 chr10:103917203 nonsynonymous SNV 0.206 1 22 hm5C_associated_SNPs_61671 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103917180-103917220
64251 chr19 36606535 36606535 1 + G C BLCA 36606534 + 36606514 36606554 41 TCCCTCAACACCTTCCGCTCCGAGAAGCGATACAGCCGCAG TCCCTCAACACCTTCCGCTCCCAGAAGCGATACAGCCGCAG < 41bp 0.834977379680586 0.572702391488616 0.66618407 0.20783645 prediction 0.524549976383941 Functional Loss - TBCB ENSG00000105254 CDS Human protein_coding chr19:36606534 chr19:36606535 nonsynonymous SNV 0.730 1 22 hm5C_associated_SNPs_61674 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:36606440-36606560
64251 chr22 20918923 20918923 1 + A T LUSC 20918919 + 20918899 20918939 41 AGCAGCAGCAGCAGCTCCAGCAGCAGCAGCAGCAGCAGCAG AGCAGCAGCAGCAGCTCCAGCAGCTGCAGCAGCAGCAGCAG < 41bp 0.762267911046838 0.449414829799231 0.28419733 0.74406 prediction 0.524535822093676 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20918919 chr22:20918923 nonsynonymous SNV 0.973 1 25 hm5C_associated_SNPs_61675 0 0 4 IGF2BP1 POSTAR2 ENCODE chr22:20918798-20918941
64251 chr9 137007159 137007159 1 + C T GBM 137007157 + 137007137 137007177 41 TTGAAGATATGGGACGTGAGCTCGGTAAGTGACACTCAGTG TTGAAGATATGGGACGTGAGCTTGGTAAGTGACACTCAGTG < 41bp 0.762266932081966 0.492144208024185 0.12498909 0.22265431 prediction 0.524533864163931 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137007157 chr9:137007159 nonsynonymous SNV 0.883 3 23 hm5C_associated_SNPs_61676 0 0 2 PPIG POSTAR2 ENCODE chr9:137007119-137007160
64251 chr15 42042356 42042356 1 + G T LUSC 42042354 + 42042334 42042374 41 CATCTGAAGGGCCCCTTAACCAGGAAATGTGTTGGAGCTTC CATCTGAAGGGCCCCTTAACCATGAAATGTGTTGGAGCTTC < 41bp 0.841745943240299 0.579496922101316 0.90437716 0.36806726 prediction 0.524498042277966 Functional Loss - MGA ENSG00000174197 CDS Human protein_coding chr15:42042354 chr15:42042356 nonsynonymous SNV 0.083 2 23 hm5C_associated_SNPs_61682 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:42042341-42042386
64251 chr11 93862544 93862544 1 + G C UCEC 93862540 + 93862520 93862560 41 TTTCTTGCTGAAGGAGCCCACGGAGCCCAAGTTCAAGGGGC TTTCTTGCTGAAGGAGCCCACGGACCCCAAGTTCAAGGGGC < 41bp 0.796347621270509 0.534107880705091 0.6654818 0.11646786 prediction 0.524479481130836 Functional Loss - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93862540 chr11:93862544 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_61685 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:93862518-93862549
64251 chr20 48431694 48431694 1 + G T UCEC 48431692 + 48431672 48431712 41 CAGCAAGAGGAGCAGTCCAGCGGCATGACCATTTTCTTCAG CAGCAAGAGGAGCAGTCCAGCGTCATGACCATTTTCTTCAG < 41bp 0.873794342279414 0.611558415056512 0.5466258 0.1926969 prediction 0.524471854445804 Functional Loss - SLC9A8 ENSG00000197818 CDS Human protein_coding chr20:48431692 chr20:48431694 nonsynonymous SNV 0.951 3 23 hm5C_associated_SNPs_61686 0 0 1 PPIG POSTAR2 ENCODE chr20:48431607-48431738
64251 chr20 31022333 31022333 1 + G T LUSC 31022331 + 31022311 31022351 41 CCACCACGGAGTCCTCCTGCCGGGGTTGGACTGGCGCCAGG CCACCACGGAGTCCTCCTGCCGTGGTTGGACTGGCGCCAGG < 41bp 0.87625664250225 0.61402106843914 0.9189429 0.8022084 prediction 0.52447114812622 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022331 chr20:31022333 synonymous SNV . 0 23 hm5C_associated_SNPs_61687 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr20:31022321-31022344
64251 chr13 113487241 113487241 1 + G T SARC 113487239 + 113487219 113487259 41 GTCCAGGTGAAAGACGATGACAGCGTAGACGGCCCCAGGAA GTCCAGGTGAAAGACGATGACATCGTAGACGGCCCCAGGAA < 41bp 0.762233102530561 0.414934144941963 0.5692624 0.30813366 prediction 0.524466205061123 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113487239 chr13:113487241 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_61688 0 0 6 BUD13 POSTAR2 ENCODE chr13:113487167-113487273
64251 chr19 36120441 36120441 1 + G T SARC 36120438 + 36120418 36120458 41 CCAGGTTTGAGCAGGAAGTTCTGGGGGCTCCAGTACCTGGA CCAGGTTTGAGCAGGAAGTTCTGTGGGCTCCAGTACCTGGA < 41bp 0.911911787227831 0.649685836532951 0.9194739 0.79370904 prediction 0.52445190138976 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120438 chr19:36120441 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61689 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:36120424-36120450
64251 chr3 179322657 179322657 1 + G C LUSC 179322653 + 179322633 179322673 41 TTCGGTTACTGCGGTGGCAGCTCTGTCTGGCCGGCCCCTTG TTCGGTTACTGCGGTGGCAGCTCTCTCTGGCCGGCCCCTTG < 41bp 0.763043354846531 0.500819783310736 0.31633997 0.1996941 prediction 0.52444714307159 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179322653 chr3:179322657 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_61690 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:179322631-179322671
64251 chr22 42089631 42089631 1 + G T UCEC 42089629 + 42089609 42089649 41 GCCTCCAGGAATCATGGGCCCAGAACCTGCTCTCTCCACAG GCCTCCAGGAATCATGGGCCCATAACCTGCTCTCTCCACAG < 41bp 0.762198933360167 0.430009545177564 0.319807 0.15983659 prediction 0.524397866720334 Functional Loss - C22orf46 ENSG00000184208 CDS Human protein_coding chr22:42089629 chr22:42089631 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_61695 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:42089615-42089653
64251 chr17 17957509 17957509 1 + C T LUSC 17957507 + 17957487 17957527 41 AAAAACACCCTTTCTTAACTCGCAAGTGGGATGCAGATGAA AAAAACACCCTTTCTTAACTCGTAAGTGGGATGCAGATGAA < 41bp 0.762185036878125 0.477416707441421 0.22990277 0.19587839 prediction 0.52437007375625 Functional Loss - GID4 ENSG00000141034 CDS Human protein_coding chr17:17957507 chr17:17957509 synonymous SNV . 0 23 hm5C_associated_SNPs_61698 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:17957484-17957512
64251 chr17 79991387 79991387 1 + C T UCEC 79991385 + 79991365 79991405 41 TGGGCACCAAGCTGGACCTCCGCGACGACAAGGACACCATT TGGGCACCAAGCTGGACCTCCGTGACGACAAGGACACCATT < 41bp 0.763017584516985 0.500854599744647 0.3367547 0.1540451 prediction 0.524325969544677 Functional Loss - RAC3 ENSG00000169750 CDS Human protein_coding chr17:79991385 chr17:79991387 synonymous SNV . 0 23 hm5C_associated_SNPs_61702 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:79991337-79991396
64251 chr8 42977680 42977680 1 + C T BLCA 42977678 + 42977658 42977698 41 TTACCCCTGGTGAACCACAGCTCCGGGATGCTGGTGAAGTG TTACCCCTGGTGAACCACAGCTTCGGGATGCTGGTGAAGTG < 41bp 0.762146459615204 0.496463201140511 0.21081692 0.07099649 prediction 0.524292919230409 Functional Loss - POMK ENSG00000185900 CDS Human protein_coding chr8:42977678 chr8:42977680 nonsynonymous SNV 0.215 1 23 hm5C_associated_SNPs_61705 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977520-42977700
64251 chr6 37418062 37418062 1 + A T UCEC 37418058 + 37418038 37418078 41 TGAGCAGGTGTCATGGTTTCCAGAATGTACCACTGAAATTC TGAGCAGGTGTCATGGTTTCCAGATTGTACCACTGAAATTC < 41bp 0.762137159596623 0.442826001843133 0.22423822 0.3048926 prediction 0.524274319193246 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37418058 chr6:37418062 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_61710 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr6:37418039-37418119
64251 chr7 150731630 150731630 1 + C T rs114212581 150731628 + 150731608 150731648 41 GGTACCTGGTGCTGCTGTCCCACGTTGGCGAGCGCATGGCT GGTACCTGGTGCTGCTGTCCCATGTTGGCGAGCGCATGGCT < 41bp 0.769197379695026 0.507107170024909 0.026459366 0.02959764 prediction 0.524180419340234 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150731628 chr7:150731630 synonymous SNV . 0 23 hm5C_associated_SNPs_61716 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:150731597-150731631
64251 chr6 35436943 35436943 1 + G C rs564411573 35436942 + 35436922 35436962 41 CCCCCTGCTCCGGGCAGGCGCGGCTGGACGGACCCCCACCC CCCCCTGCTCCGGGCAGGCGCCGCTGGACGGACCCCCACCC < 41bp 0.814087330999047 0.552008348531906 0.8479489 0.36939207 prediction 0.524157964934282 Functional Loss - RPL10A ENSG00000198755 intronic Human protein_coding chr6:35436942 chr6:35436943 . . 0 22 hm5C_associated_SNPs_61718 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:35436936-35436969
64251 chr19 1220699 1220699 1 + G T LUAD 1220696 + 1220676 1220716 41 TCCGGCTTCAAGGTGGACATCTGGTCGGCTGGGGTCACCCT TCCGGCTTCAAGGTGGACATCTGTTCGGCTGGGGTCACCCT < 41bp 0.762076355007274 0.367488597292287 0.31122488 0.29827273 prediction 0.524152710014548 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220696 chr19:1220699 nonsynonymous SNV 0.983 5 24 hm5C_associated_SNPs_61719 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1220680-1220707
64251 chr18 77891008 77891008 1 + G T GBM 77891005 + 77890985 77891025 41 GGACCTTAAAGGCTTTGATCCAGGAGAGAAATACTTTCATA GGACCTTAAAGGCTTTGATCCAGTAGAGAAATACTTTCATA < 41bp 0.76207032027904 0.380874320723404 0.6449653 0.17825496 prediction 0.524140640558081 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77891005 chr18:77891008 nonsynonymous SNV 0.947 4 24 hm5C_associated_SNPs_61723 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:77890982-77891027
64251 chr5 148637907 148637907 1 + G C GBM 148637903 + 148637883 148637923 41 AGTCTTTGGCATGACCATCTCTGAGTTTGACCGGCTGGCCC AGTCTTTGGCATGACCATCTCTGACTTTGACCGGCTGGCCC < 41bp 0.782273760727157 0.520210443307257 0.20603251 0.19930771 prediction 0.5241266348398 Functional Loss - ABLIM3 ENSG00000173210 CDS Human protein_coding chr5:148637903 chr5:148637907 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_61724 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:148637879-148637917
64251 chr19 11130284 11130284 1 + A T SKCM 11130280 + 11130260 11130300 41 CTTGCAGGGATCCCCAGCAGCAAGACGGGCCTTTGTCCCCC CTTGCAGGGATCCCCAGCAGCAAGTCGGGCCTTTGTCCCCC < 41bp 0.762056323095074 0.467933851894451 0.7522077 0.30991375 prediction 0.524112646190148 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11130280 chr19:11130284 nonsynonymous SNV 0.726 5 25 hm5C_associated_SNPs_61727 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:11130276-11130300
64251 chr7 65705578 65705578 1 + G T TGCT 65705575 + 65705555 65705595 41 GGACCACTGTGAGAACTGGCCTGGACCTCAAAGCCAACAAA GGACCACTGTGAGAACTGGCCTGTACCTCAAAGCCAACAAA < 41bp 0.762053280424262 0.378727295951135 0.3902281 0.34347552 prediction 0.524106560848524 Functional Loss - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705575 chr7:65705578 nonsynonymous SNV 0.971 1 24 hm5C_associated_SNPs_61730 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:65705552-65705582
64251 chr3 38401858 38401858 1 + G C rs148604148 38401854 + 38401834 38401874 41 CAGGGTGGTGTTCATGTGCACAAGGATGGGCTGACGGTCAC CAGGGTGGTGTTCATGTGCACAAGCATGGGCTGACGGTCAC < 41bp 0.762052971409982 0.472548103552098 0.44401547 0.21664825 prediction 0.524105942819963 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38401854 chr3:38401858 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_61731 0 0 15 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:38401840-38401860
64251 chr9 117087381 117087381 1 + C T SKCM 117087379 + 117087359 117087399 41 TGGGAGAGTTCTACGAAGCTCTCGACTGCTTGCGCATTCCC TGGGAGAGTTCTACGAAGCTCTTGACTGCTTGCGCATTCCC < 41bp 0.762047191253638 0.493441336030057 0.7765126 0.21431902 prediction 0.524094382507276 Functional Loss - ORM1 ENSG00000229314 CDS Human protein_coding chr9:117087379 chr9:117087381 synonymous SNV . 0 23 hm5C_associated_SNPs_61732 0 0 5 LARP4 POSTAR2 ENCODE chr9:117087373-117087402
64251 chr3 49049535 49049535 1 + G T UCEC 49049533 + 49049513 49049553 41 CCAGCTCTTGGTCTGGTACCCAGCAACTGCCTTAGCAGACA CCAGCTCTTGGTCTGGTACCCATCAACTGCCTTAGCAGACA < 41bp 0.762029619889748 0.426729993421 0.48479587 0.15130737 prediction 0.524059239779497 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049533 chr3:49049535 nonsynonymous SNV 0.870 1 23 hm5C_associated_SNPs_61736 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:49049500-49049540
64251 chr12 32145333 32145333 1 + C T COAD 32145331 + 32145311 32145351 41 GATAATGTTAATTCAAGACTCTCGAAGAGAAGCTTCAGTGC GATAATGTTAATTCAAGACTCTTGAAGAGAAGCTTCAGTGC < 41bp 0.763138955988581 0.501111468981101 0.58736014 0.1827732 prediction 0.524054974014959 Functional Loss - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32145331 chr12:32145333 nonsynonymous SNV 0.048 0 23 hm5C_associated_SNPs_61737 0 0 1 DDX6 POSTAR2 ENCODE chr12:32145332-32145378
64251 chr7 75517545 75517545 1 + G T LUAD 75517543 + 75517523 75517563 41 CAGTGTCTACCCAGCTTCTGCGGGCACCTCCCTGGGCATCC CAGTGTCTACCCAGCTTCTGCGTGCACCTCCCTGGGCATCC < 41bp 0.762020694487835 0.418132615903106 0.9051135 0.1443294 prediction 0.52404138897567 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517543 chr7:75517545 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_61738 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr7:75517499-75517545
64251 chr3 10191509 10191509 1 + A T KIRC 10191505 + 10191485 10191525 41 GAGCGATGCCTCCAGGTTGTCCGGAGCCTAGTCAAGCCTGA GAGCGATGCCTCCAGGTTGTCCGGTGCCTAGTCAAGCCTGA < 41bp 0.828708529776887 0.566692045257832 0.76709574 0.7263535 prediction 0.52403296903811 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191505 chr3:10191509 nonsynonymous SNV 0.973 2 25 hm5C_associated_SNPs_61739 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr1 87380477 87380477 1 + G C rs571608564 87380476 + 87380456 87380496 41 GCTTCGCGCTGTTTGCTGCGCGGGCTTTTGGAGGGGGCGGC GCTTCGCGCTGTTTGCTGCGCCGGCTTTTGGAGGGGGCGGC < 41bp 0.783318912418006 0.521307417616227 0.85321593 0.44970894 prediction 0.524022989603559 Functional Loss - HS2ST1 ENSG00000153936 UTR5 Human protein_coding chr1:87380476 chr1:87380477 . . 0 22 hm5C_associated_SNPs_61740 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:87380466-87380497
64251 chrX 100667656 100667656 1 + G T LUSC 100667653 + 100667633 100667673 41 TAATAGCATTGGCAGAGGAGCTGGGTTTGAAAGGATGAGGC TAATAGCATTGGCAGAGGAGCTGTGTTTGAAAGGATGAGGC < 41bp 0.905544512041894 0.643537276109341 0.55417496 0.21837664 prediction 0.524014471865106 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667653 chrX:100667656 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61741 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:100667612-100667676
64251 chr15 59359012 59359012 1 + T C STAD 59359011 + 59358991 59359031 41 TGTAACGGAAACTGGCCCTCCTGCAATGCCAAGGTTACCTT TGTAACGGAAACTGGCCCTCCCGCAATGCCAAGGTTACCTT < 41bp 0.765442150876275 0.503436865548793 0.24033988 0.09422192 prediction 0.524010570654963 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59359011 chr15:59359012 synonymous SNV . 0 22 hm5C_associated_SNPs_61744 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:59358985-59359014
64251 chr13 37582916 37582916 1 + G T PAAD 37582913 + 37582893 37582933 41 AGAGGAGGAACATCTGGCAACAGGAACCTTAACAATAGTAA AGAGGAGGAACATCTGGCAACAGTAACCTTAACAATAGTAA < 41bp 0.761998449869553 0.399593908141998 0.109128624 0.069087535 prediction 0.523996899739106 Functional Loss - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37582913 chr13:37582916 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_61746 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr13:37582866-37582963
64251 chr8 56792459 56792459 1 + G T rs572269043 56792457 + 56792437 56792477 41 CGGCCGTGGCGCCTCCGGGCCAGACGCGCTGCAGCCTCCAG CGGCCGTGGCGCCTCCGGGCCATACGCGCTGCAGCCTCCAG < 41bp 0.761980626132262 0.431376302742854 0.49363607 0.34913418 prediction 0.523961252264524 Functional Loss - LYN ENSG00000254087 UTR5 Human protein_coding chr8:56792457 chr8:56792459 . . 0 23 hm5C_associated_SNPs_61750 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr8:56792449-56792474
64251 chr20 17950613 17950613 1 + G T SARC 17950610 + 17950590 17950630 41 ACTTCCTCTTACTCATGTGGCCGGAAGAAAAAAGTGAACCC ACTTCCTCTTACTCATGTGGCCGTAAGAAAAAAGTGAACCC < 41bp 0.761969456065655 0.380952224652545 0.20796052 0.06325665 prediction 0.523938912131311 Functional Loss - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950610 chr20:17950613 synonymous SNV . 0 24 hm5C_associated_SNPs_61754 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:17950599-17950688
64251 chr17 26370162 26370162 1 + G T LUAD 26370159 + 26370139 26370179 41 AGCTGCAGCCATGTTAAACCCTGGGCAACAACAGCCATATT AGCTGCAGCCATGTTAAACCCTGTGCAACAACAGCCATATT < 41bp 0.905523180395074 0.643555373454903 0.171381 0.1671933 prediction 0.523935613880341 Functional Loss - NLK ENSG00000087095 CDS Human protein_coding chr17:26370159 chr17:26370162 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_61755 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:26370141-26370179
64251 chr4 83956394 83956394 1 + G C LUSC 83956393 + 83956373 83956413 41 GAAAGATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTC GAAAGATGGCGGCAGCCGTGCCACAGGATTTGGCCCAGCTC < 41bp 0.829840811784096 0.567884075243846 0.41775894 0.3663656 prediction 0.5239134730805 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83956393 chr4:83956394 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_61758 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:83956373-83956399
64251 chr1 248059210 248059210 1 + G T HNSC 248059207 + 248059187 248059227 41 AGCTCTTCCTGTTCCTGGGTCTGGGTGGTGTGGAGTGCCTG AGCTCTTCCTGTTCCTGGGTCTGTGTGGTGTGGAGTGCCTG < 41bp 0.761938668602535 0.35379459253835 0.59013546 0.2015287 prediction 0.52387733720507 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059207 chr1:248059210 nonsynonymous SNV 0.844 2 24 hm5C_associated_SNPs_61760 0 0 1 RBM15 POSTAR2 ENCODE chr1:248059192-248059245
64251 chr20 34207148 34207148 1 + C T rs199561262 34207146 + 34207126 34207166 41 TCGACCTGCAGAAGACATCCCACGATTACGCAGACAGGAAC TCGACCTGCAGAAGACATCCCATGATTACGCAGACAGGAAC < 41bp 0.800540449940877 0.538602283678775 0.09543297 0.10349715 prediction 0.523876332524204 Functional Loss - SPAG4 ENSG00000061656 CDS Human protein_coding chr20:34207146 chr20:34207148 synonymous SNV . 0 23 hm5C_associated_SNPs_61761 0 0 2 BUD13 POSTAR2 ENCODE chr20:34207076-34207149
64251 chr12 95869859 95869859 1 + A T rs200823558 95869855 + 95869835 95869875 41 TATTTTGATCAGCAGGGGAACAGGAACCTGATAAAGAATCA TATTTTGATCAGCAGGGGAACAGGTACCTGATAAAGAATCA < 41bp 0.761923682120663 0.457069687565448 0.4744586 0.42233637 prediction 0.523847364241327 Functional Loss - METAP2 ENSG00000111142 CDS Human protein_coding chr12:95869855 chr12:95869859 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_61764 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003587 chr12:95869856-95869877
64251 chr21 42629179 42629179 1 + C T UCEC 42629177 + 42629157 42629197 41 AATGCGCTGGTGATCGGTGCCACGGTGATGGAGGGCTTCTA AATGCGCTGGTGATCGGTGCCATGGTGATGGAGGGCTTCTA < 41bp 0.761920115308855 0.489908078995062 0.20655066 0.13274744 prediction 0.52384023061771 Functional Loss - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42629177 chr21:42629179 nonsynonymous SNV 0.598 4 23 hm5C_associated_SNPs_61766 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:42629146-42629179
64251 chr3 179082112 179082112 1 + G T LUSC 179082110 + 179082090 179082130 41 GCACAGATGTCACTACAGAGCTGGATAGCTGGATTGATAAG GCACAGATGTCACTACAGAGCTTGATAGCTGGATTGATAAG < 41bp 0.858434260757203 0.596523222850233 0.095722884 0.018594742 prediction 0.52382207581394 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179082110 chr3:179082112 synonymous SNV . 0 23 hm5C_associated_SNPs_61768 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:179082094-179082129
64251 chr6 157803159 157803159 1 + G C UCEC 157803155 + 157803135 157803175 41 CCCCACAAGAAGAAGAAAATCGCGGCCCGGAGGAAATGGGA CCCCACAAGAAGAAGAAAATCGCGCCCCGGAGGAAATGGGA < 41bp 0.761905020739277 0.499344393216929 0.49235886 0.26622683 prediction 0.523810041478553 Functional Loss - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:157803155 chr6:157803159 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_61769 0 0 1 PPIG POSTAR2 ENCODE chr6:157803145-157803203
64251 chr1 110766455 110766455 1 + G T LUAD 110766453 + 110766433 110766473 41 AGTCTGAGGAGACTTCCCCCCGGGACAGCACCTGCAGTGAT AGTCTGAGGAGACTTCCCCCCGTGACAGCACCTGCAGTGAT < 41bp 0.868392134704001 0.606505157302823 0.8748932 0.3205939 prediction 0.523773954802355 Functional Loss - KCNC4 ENSG00000116396 CDS Human protein_coding chr1:110766453 chr1:110766455 synonymous SNV . 0 23 hm5C_associated_SNPs_61772 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:110766434-110766465
64251 chr11 77911745 77911745 1 + C T rs147270370 77911743 + 77911723 77911763 41 GCCTCTCTGGTCAAGGAGGACTCGAACTCGGGGACCAGCTG GCCTCTCTGGTCAAGGAGGACTTGAACTCGGGGACCAGCTG < 41bp 0.80012350999095 0.538257921466069 0.9235722 0.7088356 prediction 0.523731177049761 Functional Loss - USP35 ENSG00000118369 CDS Human protein_coding chr11:77911743 chr11:77911745 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_61778 0 0 1 PPIG POSTAR2 ENCODE chr11:77911714-77911795
64251 chr12 122481907 122481907 1 + G T LUSC 122481904 + 122481884 122481924 41 GCTGTGCCCAGCGACGGCACCGAGGCCAAGGTGGATGAGGC GCTGTGCCCAGCGACGGCACCGATGCCAAGGTGGATGAGGC < 41bp 0.761828862780353 0.359707336317509 0.3288176 0.04064712 prediction 0.523657725560707 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122481904 chr12:122481907 nonsynonymous SNV 0.423 0 24 hm5C_associated_SNPs_61782 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:122481900-122481920
64251 chr1 153617731 153617731 1 + G T LUSC 153617728 + 153617708 153617748 41 CCTACATGGCGCAGACAGATCCCGAAACCAATGATTGAAGC CCTACATGGCGCAGACAGATCCCTAAACCAATGATTGAAGC < 41bp 0.761827080769309 0.412915926901614 0.4365369 0.17363703 prediction 0.523654161538619 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617728 chr1:153617731 stopgain 0.906 1 24 hm5C_associated_SNPs_61783 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153617721-153617751
64251 chr14 95030159 95030159 1 + G T LUSC 95030157 + 95030137 95030177 41 CTTCAACCTCACCGAGCTGTCTGAGTCCGATGTCCATAGGG CTTCAACCTCACCGAGCTGTCTTAGTCCGATGTCCATAGGG < 41bp 0.761813573120601 0.401885083073497 0.25157398 0.038524687 prediction 0.523627146241201 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030157 chr14:95030159 stopgain 0.024 0 23 hm5C_associated_SNPs_61784 0 0 3 RPS3 POSTAR2 ENCODE chr14:95030108-95030217
64251 chr8 21959800 21959800 1 + A T LUSC 21959796 + 21959776 21959816 41 TACATCAGCCTGGCCCCCGGCTGCAGGAGCCTATTCTCCGT TACATCAGCCTGGCCCCCGGCTGCTGGAGCCTATTCTCCGT < 41bp 0.761805899129555 0.416127161505735 0.119532555 0.13806203 prediction 0.52361179825911 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21959796 chr8:21959800 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_61786 0 0 1 DDX24 POSTAR2 ENCODE chr8:21959786-21959814
64251 chr2 48026605 48026605 1 + C T ACC 48026603 + 48026583 48026623 41 GACTCCAGAAATGATGGAGGCACGATGTAGAAAGATGGCAC GACTCCAGAAATGATGGAGGCATGATGTAGAAAGATGGCAC < 41bp 0.794587861891892 0.532790454975781 0.13526556 0.19526687 prediction 0.523594813832223 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026603 chr2:48026605 stopgain 0.996 1 23 hm5C_associated_SNPs_61789 3 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:48026477-48026605
64251 chr1 153617730 153617730 1 + C T CESC 153617728 + 153617708 153617748 41 CCTACATGGCGCAGACAGATCCCGAAACCAATGATTGAAGC CCTACATGGCGCAGACAGATCCTGAAACCAATGATTGAAGC < 41bp 0.761827080769309 0.500032987428002 0.4365369 0.35632214 prediction 0.523588186682615 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617728 chr1:153617730 synonymous SNV . 0 23 hm5C_associated_SNPs_61791 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:153617721-153617751
64251 chr19 4944462 4944462 1 + G T COAD 4944460 + 4944440 4944480 41 CCATGTGGCGGTTCCGAGTCCAGGTACCTGCAGCGTCCCGG CCATGTGGCGGTTCCGAGTCCATGTACCTGCAGCGTCCCGG < 41bp 0.761766345368595 0.415629384570554 0.48660773 0.20635235 prediction 0.523532690737189 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4944460 chr19:4944462 . 0.981 3 23 hm5C_associated_SNPs_61798 0 0 3 PRPF8 POSTAR2 ENCODE chr19:4944418-4944502
64251 chrX 47106583 47106583 1 + C T UCEC 47106581 + 47106561 47106601 41 CTTTTCCTACACCAAGTTCTCCCGAGAGAAGCTGGACACCC CTTTTCCTACACCAAGTTCTCCTGAGAGAAGCTGGACACCC < 41bp 0.788490191964427 0.526726395145167 0.25576258 0.32389265 prediction 0.52352759363852 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47106581 chrX:47106583 stopgain 0.994 0 23 hm5C_associated_SNPs_61801 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47106557-47106609
64251 chr16 29820883 29820883 1 + G T SARC 29820881 + 29820861 29820901 41 GCTTCACCACGGCAGCATACCTGCGCATCCACGCGGTGAAG GCTTCACCACGGCAGCATACCTTCGCATCCACGCGGTGAAG < 41bp 0.761743774233487 0.426547671928639 0.100559026 0.019068003 prediction 0.523487548466975 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820881 chr16:29820883 synonymous SNV . 0 23 hm5C_associated_SNPs_61805 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29820858-29820915
64251 chrX 115584287 115584287 1 + A C UCEC 115584283 + 115584263 115584303 41 TCATGCTTTTAACTTTGGGTCTCGATTCTCAGTTTGCTTCG TCATGCTTTTAACTTTGGGTCTCGCTTCTCAGTTTGCTTCG < 41bp 0.761739842262394 0.350161485284083 0.8709067 0.04947117 prediction 0.523479684524789 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115584283 chrX:115584287 nonsynonymous SNV 0.986 3 25 hm5C_associated_SNPs_61807 0 0 2 EFTUD2 POSTAR2 ENCODE chrX:115584271-115584324
64251 chr17 55752349 55752349 1 + G C BLCA 55752345 + 55752325 55752365 41 CCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGG CCCGGCAGGCTCCAACCCGGCGCGCCCCGGAGGCTTCCCGG < 41bp 0.770287758952053 0.508548841342951 0.34604472 0.10725269 prediction 0.523477835218206 Functional Loss - MSI2 ENSG00000153944 CDS Human protein_coding chr17:55752345 chr17:55752349 synonymous SNV . 0 25 hm5C_associated_SNPs_61809 0 0 4 DDX24 POSTAR2 ENCODE chr17:55752324-55752367
64251 chr11 124564263 124564263 1 + G C SKCM 124564262 + 124564242 124564282 41 TCAAAATCCAAGCTGCCTTCCGGGGACACATAGCCAGAGAG TCAAAATCCAAGCTGCCTTCCCGGGACACATAGCCAGAGAG < 41bp 0.833992197274277 0.572260106392933 0.90887564 0.8243336 prediction 0.523464181762689 Functional Loss - SPA17 ENSG00000064199 CDS Human protein_coding chr11:124564262 chr11:124564263 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_61810 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:124564250-124564291
64251 chr15 99486166 99486166 1 + C T COAD 99486164 + 99486144 99486184 41 CCTTACAGATTTTGGTATGACGCGAGATATCTATGAGACAG CCTTACAGATTTTGGTATGACGTGAGATATCTATGAGACAG < 41bp 0.761712190858972 0.486890180727664 0.34726286 0.35197616 prediction 0.523424381717945 Functional Loss - IGF1R ENSG00000140443 CDS Human protein_coding chr15:99486164 chr15:99486166 stopgain 0.940 1 23 hm5C_associated_SNPs_61813 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr15:99486151-99486180
64251 chr6 144086793 144086793 1 + C T SKCM 144086791 + 144086771 144086811 41 GTGCATTACTGCCTCAGACACTCCAGTTGTCCTCGTCAGCG GTGCATTACTGCCTCAGACACTTCAGTTGTCCTCGTCAGCG < 41bp 0.761675270933108 0.47969251970226 0.9437994 0.46567744 prediction 0.523350541866217 Functional Loss - PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144086791 chr6:144086793 nonsynonymous SNV 0.088 3 23 hm5C_associated_SNPs_61817 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:144086777-144086807
64251 chr10 12129567 12129567 1 + A T UCEC 12129563 + 12129543 12129583 41 CACTTTCTGGCCACCAAGTTCTCGACAGTGAAGCGATATGG CACTTTCTGGCCACCAAGTTCTCGTCAGTGAAGCGATATGG < 41bp 0.761670850300009 0.411187357769602 0.32193238 0.18743008 prediction 0.523341700600018 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12129563 chr10:12129567 nonsynonymous SNV 0.855 1 25 hm5C_associated_SNPs_61818 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr10:12129557-12129577
64251 chr12 106751607 106751607 1 + G T SARC 106751605 + 106751585 106751625 41 GTCTTGCAGTTTGCTTGGTGCAGGGAAGGCGGGCGCGGAGG GTCTTGCAGTTTGCTTGGTGCATGGAAGGCGGGCGCGGAGG < 41bp 0.804864740353727 0.543198621355227 0.8551725 0.36838007 prediction 0.523332237997 Functional Loss - POLR3B ENSG00000013503 UTR5 Human protein_coding chr12:106751605 chr12:106751607 . . 0 23 hm5C_associated_SNPs_61819 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:106751604-106751634
64251 chr17 55078352 55078352 1 + G T UCEC 55078349 + 55078329 55078369 41 CTGGATCTCATCGTAGATACCATGGGTAGGAATTGACTCTG CTGGATCTCATCGTAGATACCATTGGTAGGAATTGACTCTG < 41bp 0.761653933724926 0.376850080249598 0.66590226 0.17312571 prediction 0.523307867449853 Functional Loss - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55078349 chr17:55078352 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_61821 0 0 1 UCHL5 POSTAR2 ENCODE chr17:55078291-55078354
64251 chr17 4684105 4684105 1 + G T SARC 4684103 + 4684083 4684123 41 GGTACTGTGTCCGGGGATTGCAGCCGTTCGGGCAGGGGGCA GGTACTGTGTCCGGGGATTGCATCCGTTCGGGCAGGGGGCA < 41bp 0.761642915838918 0.402486095420211 0.8897409 0.5449036 prediction 0.523285831677837 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4684103 chr17:4684105 nonsynonymous SNV 0.061 4 23 hm5C_associated_SNPs_61823 0 0 3 RPS3 POSTAR2 ENCODE chr17:4684086-4684161
64251 chr17 40997826 40997826 1 + G T LUAD 40997823 + 40997803 40997843 41 GTAACAGCCGAGGCTTGGTGCGGGGAGTGGACTGCCCCTAT GTAACAGCCGAGGCTTGGTGCGGTGAGTGGACTGCCCCTAT < 41bp 0.91887678409932 0.657266283708627 0.93547034 0.8344869 prediction 0.523221000781386 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997823 chr17:40997826 stopgain 0.045 1 24 hm5C_associated_SNPs_61827 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:40997812-40997841
64251 chr7 100304795 100304795 1 + G C LUAD 100304791 + 100304771 100304811 41 GCTTGTTGATGAGCTGGAGCCAGAGACCGACACACGGGAGC GCTTGTTGATGAGCTGGAGCCAGACACCGACACACGGGAGC < 41bp 0.7785827048154 0.516978831687804 0.9144092 0.34667826 prediction 0.523207746255194 Functional Loss - POP7 ENSG00000172336 CDS Human protein_coding chr7:100304791 chr7:100304795 nonsynonymous SNV 0.604 1 25 hm5C_associated_SNPs_61829 0 0 17 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:100304760-100304796
64251 chr19 50902284 50902284 1 + A T CESC 50902280 + 50902260 50902300 41 AGGAGCAGGAGGAGGAGGAGCTGCAGTCAGTCCTGGAGGGG AGGAGCAGGAGGAGGAGGAGCTGCTGTCAGTCCTGGAGGGG < 41bp 0.761600865438623 0.437853739905189 0.8738819 0.84993935 prediction 0.523201730877246 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902280 chr19:50902284 nonsynonymous SNV 0.510 0 25 hm5C_associated_SNPs_61830 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50902280-50902294
64251 chr1 94014886 94014886 1 + C T LUAD 94014884 + 94014864 94014904 41 ACCAGGAAGTCCGTGGGCCACCCCAGCAGCATGGTCACCAC ACCAGGAAGTCCGTGGGCCACCTCAGCAGCATGGTCACCAC < 41bp 0.813778004884763 0.552185207497132 0.17388022 0.123405606 prediction 0.523185594775263 Functional Loss - FNBP1L ENSG00000137942 CDS Human protein_coding chr1:94014884 chr1:94014886 synonymous SNV . 0 23 hm5C_associated_SNPs_61832 0 0 2 BUD13 POSTAR2 ENCODE chr1:94014834-94014899
64251 chr6 33383646 33383646 1 + C T LUAD 33383644 + 33383624 33383664 41 ATCCCTAAAAGTGCCCCCCACTCGATGACTGCCTCATCTTC ATCCCTAAAAGTGCCCCCCACTTGATGACTGCCTCATCTTC < 41bp 0.786502268418742 0.524913437102066 0.76243824 0.10039261 prediction 0.523177662633353 Functional Loss - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383644 chr6:33383646 stopgain 0.995 0 23 hm5C_associated_SNPs_61834 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:33383632-33383658
64251 chr20 37580954 37580954 1 + G T OV 37580951 + 37580931 37580971 41 AGTACCTGGGCACCCCCCACCTGGAACTGTACTTGAGTGAC AGTACCTGGGCACCCCCCACCTGTAACTGTACTTGAGTGAC < 41bp 0.761582254682867 0.386774782395557 0.27494407 0.07391241 prediction 0.523164509365734 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580951 chr20:37580954 stopgain 0.981 0 24 hm5C_associated_SNPs_61836 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:37580833-37580992
64251 chr8 123964437 123964437 1 + C T KICH 123964435 + 123964415 123964455 41 CAGCTGAGATCCTCTCGAGACTCGGCGGGGTGGAGCTCCTC CAGCTGAGATCCTCTCGAGACTTGGCGGGGTGGAGCTCCTC < 41bp 0.761580437694615 0.485335420373961 0.7023782 0.52800405 prediction 0.523160875389231 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964435 chr8:123964437 synonymous SNV . 0 23 hm5C_associated_SNPs_61840 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:123964433-123964456
64251 chr1 1417552 1417552 1 + G T GBM 1417549 + 1417529 1417569 41 CGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGT CGGGAGATGGAGCTGCGGCACAATAATGAGATGCTGCGAGT < 41bp 0.911852996728617 0.650277029038278 0.41761285 0.54681075 prediction 0.523151935380676 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417549 chr1:1417552 nonsynonymous SNV 0.011 4 24 hm5C_associated_SNPs_61841 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:1417549-1417589
64251 chr9 130569504 130569504 1 + C T BLCA 130569502 + 130569482 130569522 41 CCACAGGATGGCAGCTGTGTCTCCATGCCCCCCTACTTCCG CCACAGGATGGCAGCTGTGTCTTCATGCCCCCCTACTTCCG < 41bp 0.805084876632275 0.543533613029126 0.9801322 0.84126854 prediction 0.523102527206297 Functional Loss - FPGS ENSG00000136877 CDS Human protein_coding chr9:130569502 chr9:130569504 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_61844 0 0 1 EFTUD2 POSTAR2 ENCODE chr9:130569411-130569508
64251 chr19 41743962 41743962 1 + C T GBM 41743960 + 41743940 41743980 41 ATCAGCTTCGGCTAGGCAGCCTCCATCCTCACACCCCTTAT ATCAGCTTCGGCTAGGCAGCCTTCATCCTCACACCCCTTAT < 41bp 0.761542237004739 0.470688747137002 0.94304407 0.07637259 prediction 0.523084474009479 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41743960 chr19:41743962 synonymous SNV . 0 23 hm5C_associated_SNPs_61846 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr19:41743960-41743980
64251 chr7 17379003 17379003 1 + G T LGG 17379001 + 17378981 17379021 41 ATGAGCAAATTGACCAGCCTCAGGATGTGAACTCATTTGCT ATGAGCAAATTGACCAGCCTCATGATGTGAACTCATTTGCT < 41bp 0.761539128503241 0.434024858531828 0.6627583 0.17506453 prediction 0.523078257006482 Functional Loss - AHR ENSG00000106546 CDS Human protein_coding chr7:17379001 chr7:17379003 nonsynonymous SNV 0.583 1 23 hm5C_associated_SNPs_61848 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:17378990-17379019
64251 chr9 101611831 101611831 1 + G C rs140972666 101611827 + 101611807 101611847 41 AACTGATAATACCTCAGCTGCGGGGTTAAAGTTTTCCCAGT AACTGATAATACCTCAGCTGCGGGCTTAAAGTTTTCCCAGT < 41bp 0.800623367049774 0.539102395781017 0.9376395 0.89819336 prediction 0.523041942537514 Functional Loss - GALNT12 ENSG00000267026 ncRNA_exonic Human antisense chr9:101611827 chr9:101611831 . . 0 25 hm5C_associated_SNPs_61853 0 0 5 DDX55 POSTAR2 ENCODE chr9:101611798-101611905
64251 chr6 18215342 18215342 1 + G T PAAD 18215340 + 18215320 18215360 41 AGCAGTGCATGGCCACGCTCCGGGAGCTGTTCAAGGAGCAG AGCAGTGCATGGCCACGCTCCGTGAGCTGTTCAAGGAGCAG < 41bp 0.875839004427424 0.614330245737198 0.90152895 0.2603393 prediction 0.523017517380451 Functional Loss - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18215340 chr6:18215342 synonymous SNV . 0 23 hm5C_associated_SNPs_61855 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:18215321-18215345
64251 chr19 1395516 1395516 1 - C G rs534284825 1395520 - 1395500 1395540 41 CAAGCAGGCTGGGGACAGGACGGCGACAGGCTCCGGCGGCG CAAGCAGGCTGGGGACAGGACGGCCACAGGCTCCGGCGGCG < 41bp 0.825763233793661 0.564264441721508 0.8141209 0.4401316 prediction 0.522997584144308 Functional Loss - NDUFS7 ENSG00000248015 ncRNA_exonic Human antisense chr19:1395520 chr19:1395516 . . 0 25 hm5C_associated_SNPs_61857 0 0 1 XRN2 POSTAR2 ENCODE chr19:1395495-1395530
64251 chr19 1221228 1221228 1 + G C LUAD 1221224 + 1221204 1221244 41 AAATGAAGCTACAACATCACCACGGGTCTGTACCCCTTCGA AAATGAAGCTACAACATCACCACGCGTCTGTACCCCTTCGA < 41bp 0.761498671490343 0.48281424432688 0.4648389 0.14962801 prediction 0.522997342980686 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1221224 chr19:1221228 nonsynonymous SNV 0.951 5 25 hm5C_associated_SNPs_61858 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:1221218-1221288
64251 chr16 21982917 21982917 1 + G T UCEC 21982915 + 21982895 21982935 41 GAGGGGTGGGCTTGGTTTATCTGGTGCAAAGGCCAACTACC GAGGGGTGGGCTTGGTTTATCTTGTGCAAAGGCCAACTACC < 41bp 0.87521758980001 0.613726537212964 0.7765741 0.3370728 prediction 0.522982105174093 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21982915 chr16:21982917 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_61861 0 0 16 TARDBP POSTAR2 DRA001158,DRS012385 chr16:21982893-21982920
64251 chr20 18534972 18534972 1 + G T UCEC 18534969 + 18534949 18534989 41 AGGCACCACTGGATGATGCTCAAGAAATTCTGCAAGCACGC AGGCACCACTGGATGATGCTCAATAAATTCTGCAAGCACGC < 41bp 0.761484506720961 0.368939793299701 0.2783004 0.102817744 prediction 0.522969013441922 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18534969 chr20:18534972 stopgain 1.000 1 24 hm5C_associated_SNPs_61862 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:18534952-18534999
64251 chr16 30771686 30771686 1 + A T UCEC 30771682 + 30771662 30771702 41 GTGAGAAGCCCTGCTGGCGGCAGAAAATGAGCGCGTGGCAG GTGAGAAGCCCTGCTGGCGGCAGATAATGAGCGCGTGGCAG < 41bp 0.781583129143793 0.520101357144029 0.69405 0.7598964 prediction 0.522963543999528 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30771682 chr16:30771686 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_61863 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30771681-30771730
64251 chr14 97319244 97319244 1 + C T SKCM 97319242 + 97319222 97319262 41 AGCAAATGCCAAAAGGTTTTCTCGGAAAACTGTCTTGCAGC AGCAAATGCCAAAAGGTTTTCTTGGAAAACTGTCTTGCAGC < 41bp 0.76148012136927 0.49173841623473 0.112372786 0.14515728 prediction 0.522960242738541 Functional Loss - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97319242 chr14:97319244 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61864 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:97319179-97319267
64251 chr3 42632421 42632421 1 + G C BLCA 42632417 + 42632397 42632437 41 TGGCCTTCGTACCGGACTGGCTGAGGGGCAAGGCGGAAGTC TGGCCTTCGTACCGGACTGGCTGACGGGCAAGGCGGAAGTC < 41bp 0.761477420525706 0.497881802240038 0.35331154 0.37192404 prediction 0.522954841051411 Functional Loss - SS18L2 ENSG00000008324 CDS Human protein_coding chr3:42632417 chr3:42632421 nonsynonymous SNV 0.858 1 25 hm5C_associated_SNPs_61865 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr3:42632394-42632422
64251 chr1 229773793 229773793 1 + A T LUAD 229773789 + 229773769 229773809 41 GCCGACATTTCCCAAGGAAGCGACAGGACGCTGCTCTCCCA GCCGACATTTCCCAAGGAAGCGACTGGACGCTGCTCTCCCA < 41bp 0.842228999680024 0.580760202712255 0.4001351 0.2903931 prediction 0.522937593935538 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229773789 chr1:229773793 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_61869 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229773780-229773800
64251 chr19 50208359 50208359 1 + G T LUAD 50208357 + 50208337 50208377 41 ACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGA ACCGCCACCGCCTGAACCGCCATGAGATACCCCCGGTGAGA < 41bp 0.889079613163612 0.627626790840716 0.9084406 0.49548644 prediction 0.522905644645793 Functional Loss - CPT1C ENSG00000169169 CDS Human protein_coding chr19:50208357 chr19:50208359 nonsynonymous SNV 0.839 4 23 hm5C_associated_SNPs_61871 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50208321-50208362
64251 chr4 83378094 83378094 1 + G T SARC 83378091 + 83378071 83378111 41 GTTGATGGTCACTTTGATACCAAGATTGGACACAAAGTAGA GTTGATGGTCACTTTGATACCAATATTGGACACAAAGTAGA < 41bp 0.902137765827473 0.640686827200304 0.06286776 0.05021748 prediction 0.522901877254337 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83378091 chr4:83378094 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_61872 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:83378065-83378094
64251 chr13 115002357 115002357 1 + C T COAD 115002355 + 115002335 115002375 41 AGCCGCCCATGCACTTCGGTCACGAAAACTGGACAAAGTAA AGCCGCCCATGCACTTCGGTCATGAAAACTGGACAAAGTAA < 41bp 0.761440162608989 0.483883342778122 0.06031567 0.103862464 prediction 0.522880325217978 Functional Loss - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115002355 chr13:115002357 stopgain 0.989 1 23 hm5C_associated_SNPs_61874 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:115002327-115002368
64251 chr11 60689595 60689595 1 + G T COAD 60689593 + 60689573 60689613 41 TGGAGGAGCTGCGCTGGCGCCAGAGGCGAGCGGCCAAGGGG TGGAGGAGCTGCGCTGGCGCCATAGGCGAGCGGCCAAGGGG < 41bp 0.875107082985131 0.613687130906352 0.90497637 0.8745079 prediction 0.522839904157559 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689593 chr11:60689595 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_61875 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:60689563-60689595
64251 chr12 21654825 21654825 1 + G C rs71539408 21654821 + 21654801 21654841 41 AGCTTCCCACCCTGGGCTTTCCGAGGTGCTGTCGCCGCTGT AGCTTCCCACCCTGGGCTTTCCGACGTGCTGTCGCCGCTGT < 41bp 0.781929218019462 0.520512820795379 0.90344334 0.30549008 prediction 0.522832794448165 Functional Loss - GOLT1B ENSG00000111711 UTR5 Human protein_coding chr12:21654821 chr12:21654825 . . 0 25 hm5C_associated_SNPs_61877 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:21654800-21654830
64251 chr17 42429721 42429721 1 + G C BLCA 42429720 + 42429700 42429740 41 CCCCGCCAGGCTGTGTGCTGCGAGGATCGCCAGCACTGCTG CCCCGCCAGGCTGTGTGCTGCCAGGATCGCCAGCACTGCTG < 41bp 0.761411268000655 0.439291840244001 0.92009056 0.901294 prediction 0.52282253600131 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42429720 chr17:42429721 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_61878 0 0 9 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:42429720-42429740
64251 chr18 672874 672874 1 - C A THCA 672876 - 672856 672896 41 TCCTGAGCTTTGGGAAAGGTCTGGGTTCTCGCTGAAGCTAA TCCTGAGCTTTGGGAAAGGTCTTGGTTCTCGCTGAAGCTAA < 41bp 0.761409415161553 0.445292955920064 0.3009987 0.09406254 prediction 0.522818830323107 Functional Loss - TYMS ENSG00000176890 CDS Human protein_coding chr18:672876 chr18:672874 synonymous SNV . 0 23 hm5C_associated_SNPs_61879 0 0 5 LSM11 POSTAR2 ENCODE chr18:672852-672903
64251 chr17 1946027 1946027 1 + G T UCEC 1946024 + 1946004 1946044 41 AATCACTGGGGATGGTGGCACAGGCACTGAACAGGCTGGGG AATCACTGGGGATGGTGGCACAGTCACTGAACAGGCTGGGG < 41bp 0.761393201955064 0.363364683826757 0.8080876 0.6967389 prediction 0.522786403910128 Functional Loss - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946024 chr17:1946027 nonsynonymous SNV 0.496 2 24 hm5C_associated_SNPs_61883 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:1946004-1946032
64251 chr22 38201857 38201857 1 + G T UCEC 38201854 + 38201834 38201874 41 CTAGCCAAGAGCGACGAACCCAAGAAGTCAGTGGCCTTCAA CTAGCCAAGAGCGACGAACCCAATAAGTCAGTGGCCTTCAA < 41bp 0.906297581639538 0.644906810502485 0.8442483 0.2752315 prediction 0.522781542274106 Functional Loss - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201854 chr22:38201857 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_61884 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:38201839-38201877
64251 chr2 175293746 175293746 1 + A C rs183204549 175293742 + 175293722 175293762 41 CATTATATTCAAAGAGTGCTCAGGAAGTTATGTGTTCAAAG CATTATATTCAAAGAGTGCTCAGGCAGTTATGTGTTCAAAG < 41bp 0.761382433418882 0.433179755894033 0.26622957 0.19478524 prediction 0.522764866837765 Functional Loss - SCRN3 ENSG00000144306 UTR3 Human protein_coding chr2:175293742 chr2:175293746 . . 0 25 hm5C_associated_SNPs_61887 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr2:175293726-175293753
64251 chr1 149858636 149858636 1 + G C BLCA 149858632 + 149858612 149858652 41 CGAGTGCACCGCTTGCTGCGCAAAGGCAACTACGCGGAGCG CGAGTGCACCGCTTGCTGCGCAAACGCAACTACGCGGAGCG < 41bp 0.761376186197022 0.488698471635838 0.28984606 0.24526495 prediction 0.522752372394043 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858632 chr1:149858636 nonsynonymous SNV 0.954 4 25 hm5C_associated_SNPs_61891 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:149858600-149858640
64251 chr2 62132853 62132853 1 + G C LUAD 62132852 + 62132832 62132872 41 GAGGGTGGCAAACCCCTGAGCGGGCTGCTGAATGCGCTGGC GAGGGTGGCAAACCCCTGAGCCGGCTGCTGAATGCGCTGGC < 41bp 0.840162914942371 0.578789271121629 0.9192942 0.89982015 prediction 0.522747287641484 Functional Loss - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62132852 chr2:62132853 nonsynonymous SNV 0.686 4 22 hm5C_associated_SNPs_61892 0 0 2 DDX3X POSTAR2 ENCODE chr2:62132827-62132960
64251 chr2 190332311 190332311 1 + C T UCEC 190332309 + 190332289 190332329 41 GTTAGTTTTGAGGAAATAGTCACAATATGGGATTCTGTAAC GTTAGTTTTGAGGAAATAGTCATAATATGGGATTCTGTAAC < 41bp 0.809667384584173 0.54829829341366 0.11326775 0.13469976 prediction 0.522738182341027 Functional Loss - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190332309 chr2:190332311 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_61894 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:190332289-190332319
64251 chr1 11896113 11896113 1 + C T PAAD 11896111 + 11896091 11896131 41 CTGGTGAGCATCCTGCGCACCACGGTCCACCATGCCTTCCC CTGGTGAGCATCCTGCGCACCATGGTCCACCATGCCTTCCC < 41bp 0.761369013747868 0.494574637980869 0.03539124 0.03310117 prediction 0.522738027495735 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11896111 chr1:11896113 nonsynonymous SNV 0.979 5 23 hm5C_associated_SNPs_61895 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:11896031-11896118
64251 chr1 23695932 23695932 1 - C A HNSC 23695934 - 23695914 23695954 41 ACGCCAGGTCTGAGAGAACGCTGCGGCTCTGGAACCCGTTC ACGCCAGGTCTGAGAGAACGCTTCGGCTCTGGAACCCGTTC < 41bp 0.810926279090241 0.549559876491581 0.79221827 0.25715792 prediction 0.522732805197319 Functional Loss - ZNF436-AS1 ENSG00000249087 CDS Human antisense chr1:23695934 chr1:23695932 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_61897 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:23695927-23695948
64251 chr7 142498940 142498940 1 + A T LUSC 142498936 + 142498916 142498956 41 GAGCAGCCCGCCCTCAATGACTCCAGATACTGCCTGAGCAG GAGCAGCCCGCCCTCAATGACTCCTGATACTGCCTGAGCAG < 41bp 0.761332096928247 0.450258783070506 0.9548581 0.065853536 prediction 0.522664193856494 Functional Loss - PRSS3P2;EPHB6 ENSG00000211772 CDS Human TR_C_gene chr7:142498936 chr7:142498940 unknown . 0 25 hm5C_associated_SNPs_61902 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831622 chr7:142498940-142498960
64251 chr1 231474322 231474322 1 + G C BLCA 231474321 + 231474301 231474341 41 TGGGGCCAGCTGGAGGCCGTCGAGGTGAAGTGGAGCGTGCG TGGGGCCAGCTGGAGGCCGTCCAGGTGAAGTGGAGCGTGCG < 41bp 0.761316853887028 0.455671608823311 0.9074346 0.90147066 prediction 0.522633707774055 Functional Loss - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231474321 chr1:231474322 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_61904 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:231474289-231474322
64251 chr17 40997723 40997723 1 + G T STAD 40997721 + 40997701 40997741 41 TAGCCTATGAAGTCAGTGTCCAGGAGTGTGTATCTATCTAT TAGCCTATGAAGTCAGTGTCCATGAGTGTGTATCTATCTAT < 41bp 0.880028620158103 0.618720333305687 0.463851 0.15451911 prediction 0.522616573704832 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997721 chr17:40997723 nonsynonymous SNV 0.211 4 23 hm5C_associated_SNPs_61907 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:40997646-40997804
64251 chr3 49751254 49751254 1 + G C CESC 49751250 + 49751230 49751270 41 CGGGCTGTGGAGCGAATCCCCGAGGAGCAGTGAGTGGGGCC CGGGCTGTGGAGCGAATCCCCGAGCAGCAGTGAGTGGGGCC < 41bp 0.761302936318956 0.482756635937519 0.9117017 0.86095697 prediction 0.522605872637912 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49751250 chr3:49751254 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_61909 0 0 1 PPIG POSTAR2 ENCODE chr3:49751209-49751254
64251 chr7 127544871 127544871 1 + G T LUSC 127544868 + 127544848 127544888 41 CCACCGTGTTGCAGATATATCTGGGGTGAGTCGAGTCCCTG CCACCGTGTTGCAGATATATCTGTGGTGAGTCGAGTCCCTG < 41bp 0.761301208710389 0.498848718974364 0.9345193 0.6030391 prediction 0.522602417420778 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127544868 chr7:127544871 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_61911 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr7:127544864-127544895
64251 chr15 57545466 57545466 1 + C T COAD 57545464 + 57545444 57545484 41 TTTTTAATCCATACAGCAGTCTCGAATGGAGGATCGTTTAG TTTTTAATCCATACAGCAGTCTTGAATGGAGGATCGTTTAG < 41bp 0.761297954975266 0.485083018480183 0.90908706 0.14246747 prediction 0.522595909950532 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57545464 chr15:57545466 stopgain 1.000 1 23 hm5C_associated_SNPs_61912 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:57545460-57545480
64251 chr7 65705785 65705785 1 + G T UCEC 65705782 + 65705762 65705802 41 CAAGTAAAGAGAAGATCCGCCTGGATGAGGCTGGTGTTACT CAAGTAAAGAGAAGATCCGCCTGTATGAGGCTGGTGTTACT < 41bp 0.761274603398995 0.383608299685761 0.28543574 0.23130807 prediction 0.522549206797991 Functional Loss - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705782 chr7:65705785 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_61918 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:65705750-65705788
64251 chr1 229779310 229779310 1 + A T LUAD 229779306 + 229779286 229779326 41 AAATTCCTGTTCAGGTCACTCAGGATATTGAGCCTCATTTG AAATTCCTGTTCAGGTCACTCAGGTTATTGAGCCTCATTTG < 41bp 0.834663916913658 0.573406180831676 0.90848285 0.9032465 prediction 0.522515472163964 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229779306 chr1:229779310 nonsynonymous SNV 0.797 1 25 hm5C_associated_SNPs_61922 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:229779285-229779323
64251 chr1 53676198 53676198 1 + C T UCEC 53676196 + 53676176 53676216 41 TCTCAGACAGCAGCCCCGCCCCCGAGTTTCCCCTGGCATAC TCTCAGACAGCAGCCCCGCCCCTGAGTTTCCCCTGGCATAC < 41bp 0.80133074612437 0.540080844990544 0.18537518 0.09853423 prediction 0.522499802267651 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676196 chr1:53676198 synonymous SNV . 0 23 hm5C_associated_SNPs_61924 1 0 1 FXR2 POSTAR2 ENCODE chr1:53676167-53676226
64251 chr7 66260570 66260570 1 + C T UCEC 66260568 + 66260548 66260588 41 TGTGGCCGAAAGGATGCAAACTCGTGGGAAAGGTAACACTG TGTGGCCGAAAGGATGCAAACTTGTGGGAAAGGTAACACTG < 41bp 0.761247938249937 0.478604448351767 0.106960356 0.1424497 prediction 0.522495876499873 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66260568 chr7:66260570 nonsynonymous SNV 0.980 2 23 hm5C_associated_SNPs_61925 0 0 3 BUD13 POSTAR2 ENCODE chr7:66260570-66260640
64251 chr7 148875975 148875975 1 + A T SKCM 148875971 + 148875951 148875991 41 GGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTGT GGGTAGCTATCCCCTCCCACCTCCTGTTGGCGAGCAGGTGT < 41bp 0.761220040017804 0.418182058981862 0.93553674 0.17612758 prediction 0.522440080035608 Functional Loss - ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148875971 chr7:148875975 synonymous SNV . 0 25 hm5C_associated_SNPs_61930 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:148875940-148875980
64251 chr2 27844169 27844169 1 + C T STAD 27844167 + 27844147 27844187 41 AGCAGCCTGGCATTGAGCTTCCCGAGACAGAGCTGAGTCTT AGCAGCCTGGCATTGAGCTTCCTGAGACAGAGCTGAGTCTT < 41bp 0.766416769839367 0.505228634195793 0.300313 0.2656384 prediction 0.522376271287148 Functional Loss - ZNF512 ENSG00000243943 CDS Human protein_coding chr2:27844167 chr2:27844169 synonymous SNV . 0 23 hm5C_associated_SNPs_61938 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27844135-27844199
64251 chr2 239237413 239237413 1 + G T UCEC 239237411 + 239237391 239237431 41 CCTCACTGACCTCAAGATCTCAGGAATTGGATAATAAGAAT CCTCACTGACCTCAAGATCTCATGAATTGGATAATAAGAAT < 41bp 0.869570291195376 0.608382589775498 0.8977485 0.3050204 prediction 0.522375402839756 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239237411 chr2:239237413 nonsynonymous SNV 0.012 0 23 hm5C_associated_SNPs_61939 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:239237411-239237436
64251 chr17 37864584 37864584 1 + A C rs61737968 37864580 + 37864560 37864600 41 CTTCCCCCTCCCAGGATATCCAGGAGGTGCAGGGCTACGTG CTTCCCCCTCCCAGGATATCCAGGCGGTGCAGGGCTACGTG < 41bp 0.79241578125374 0.531234233299666 0.9282954 0.9339242 prediction 0.522363095908149 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37864580 chr17:37864584 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_61940 1 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:37864570-37864604
64251 chr10 45488754 45488754 1 + G T UCEC 45488751 + 45488731 45488771 41 GTCTGACGATGCTGCAGCGCCTGGAGCAGCTGGTGGAGGCC GTCTGACGATGCTGCAGCGCCTGTAGCAGCTGGTGGAGGCC < 41bp 0.905889353738577 0.644715765543012 0.25843865 0.048728853 prediction 0.52234717639113 Functional Loss - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45488751 chr10:45488754 stopgain 0.995 0 24 hm5C_associated_SNPs_61945 0 0 2 PPIG POSTAR2 ENCODE chr10:45488726-45488770
64251 chr17 73221237 73221237 1 + C T UCEC 73221235 + 73221215 73221255 41 GCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGG GCAGGGCCGGCTGGATGAGGCCTGACAGATGCTCTCCAAGG < 41bp 0.777671573279361 0.516516896595853 0.16516188 0.08771914 prediction 0.522309353367016 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73221235 chr17:73221237 stopgain 0.997 1 23 hm5C_associated_SNPs_61948 0 0 4 BUD13 POSTAR2 ENCODE chr17:73221196-73221238
64251 chr9 130866023 130866023 1 + G T LUSC 130866021 + 130866001 130866041 41 CACAGTGGAGGAGAGGCAGACGGGGATGTGGTGGAGACACC CACAGTGGAGGAGAGGCAGACGTGGATGTGGTGGAGACACC < 41bp 0.76115235849522 0.425075436084959 0.900628 0.7166792 prediction 0.52230471699044 Functional Loss - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130866021 chr9:130866023 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61949 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr9:130866016-130866032
64251 chr6 27261716 27261716 1 + G C rs371781670 27261712 + 27261692 27261732 41 AGAGCGTGCTGCTACTAATGCCAGGGTCGAGGTTTCGATCC AGAGCGTGCTGCTACTAATGCCAGCGTCGAGGTTTCGATCC < 41bp 0.770071804593655 0.508920839445261 0.8819746 0.4681361 prediction 0.522301930296787 Functional Loss - PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27261712 chr6:27261716 . . 0 25 hm5C_associated_SNPs_61951 0 0 63 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27261693-27261719
64251 chr5 145641315 145641315 1 + G T LUSC 145641313 + 145641293 145641333 41 TGCCACAGCATCTACATCAGCAGCAGGTGCTAGTGGCCCAG TGCCACAGCATCTACATCAGCATCAGGTGCTAGTGGCCCAG < 41bp 0.875780750564762 0.614644170080466 0.28063926 0.087697774 prediction 0.52227316096859 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145641313 chr5:145641315 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61954 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:145641315-145641341
64251 chr5 74647091 74647091 1 + G T UCEC 74647089 + 74647069 74647109 41 CTATGCTGGTCAGAAATAACCAGAAATGTGATTCAGTAGAG CTATGCTGGTCAGAAATAACCATAAATGTGATTCAGTAGAG < 41bp 0.761129030606882 0.450061012590424 0.56632507 0.12494674 prediction 0.522258061213764 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74647089 chr5:74647091 nonsynonymous SNV 0.572 0 23 hm5C_associated_SNPs_61956 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:74647054-74647092
64251 chr19 33697087 33697087 1 + A T COAD 33697083 + 33697063 33697103 41 GGTACCAACCTGTGCATCTTCGAGACGTGGCGCTGTGACGG GGTACCAACCTGTGCATCTTCGAGTCGTGGCGCTGTGACGG < 41bp 0.854356900944753 0.593232332414813 0.71084857 0.37403607 prediction 0.52224913705988 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33697083 chr19:33697087 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_61960 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:33697065-33697094
64251 chr16 2816536 2816536 1 + C T UCEC 2816534 + 2816514 2816554 41 ATCTCGCACATCTCCAGTAACTCGAAGAAGGTCCCGCTCTC ATCTCGCACATCTCCAGTAACTTGAAGAAGGTCCCGCTCTC < 41bp 0.77440590279495 0.513283801420207 0.77923316 0.5603861 prediction 0.522244202749485 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816534 chr16:2816536 stopgain 0.990 1 23 hm5C_associated_SNPs_61961 0 0 24 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816520-2816580
64251 chr2 241500167 241500167 1 - C G LUAD 241500168 - 241500148 241500188 41 CCCGAGGAAGAGTGAGGGCGCGACGCGCACCAACGGTGGAG CCCGAGGAAGAGTGAGGGCGCCACGCGCACCAACGGTGGAG < 41bp 0.761117006272411 0.472628833728044 0.6639525 0.7405156 prediction 0.522234012544822 Functional Loss - ANKMY1;DUSP28 ENSG00000144504;ENSG00000188542 CDS Human other chr2:241500168 chr2:241500167 synonymous SNV . 0 22 hm5C_associated_SNPs_61965 0 0 2 CSTF2T POSTAR2 ENCODE chr2:241500079-241500171
64251 chr11 8060537 8060537 1 + G T LUAD 8060534 + 8060514 8060554 41 TCTCAGCATTCAAAGCAGCACAGGAAACCTGGGCCCCTGAA TCTCAGCATTCAAAGCAGCACAGTAAACCTGGGCCCCTGAA < 41bp 0.761114282046752 0.377696618048591 0.87537384 0.93097603 prediction 0.522228564093505 Functional Loss - TUB ENSG00000166402 CDS Human protein_coding chr11:8060534 chr11:8060537 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_61966 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:8060520-8060540
64251 chr15 42130833 42130833 1 + A C rs574589834 42130829 + 42130809 42130849 41 TCAGCCCCTGGCAGCAAGCTCTCCAGGCTGGGATTGCAGGG TCAGCCCCTGGCAGCAAGCTCTCCCGGCTGGGATTGCAGGG < 41bp 0.761114152343504 0.368389952031674 0.9537442 0.22093147 prediction 0.522228304687009 Functional Loss - JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708 intronic Human other chr15:42130829 chr15:42130833 . . 0 25 hm5C_associated_SNPs_61967 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:42130819-42130839
64251 chr2 220045846 220045846 1 + C T UCEC 220045844 + 220045824 220045864 41 GCTGATCCAGAGGATGTACACTCGCCTGGAGCCCCTGCTCA GCTGATCCAGAGGATGTACACTTGCCTGGAGCCCCTGCTCA < 41bp 0.79062744929598 0.529520584180234 0.16287646 0.16533083 prediction 0.522213730231491 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220045844 chr2:220045846 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_61969 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:220045816-220045846
64251 chr1 204380314 204380314 1 - C A KIRC 204380316 - 204380296 204380336 41 CCAGCTCCTTGCGCCGCTCCCCGGATTGCTTCAGAAGGTGC CCAGCTCCTTGCGCCGCTCCCCTGATTGCTTCAGAAGGTGC < 41bp 0.761102889634181 0.420422832501882 0.7244786 0.111608505 prediction 0.522205779268363 Functional Loss - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204380316 chr1:204380314 stopgain 0.099 0 23 hm5C_associated_SNPs_61970 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:204380300-204380320
64251 chr1 155582849 155582849 1 + G T LGG 155582847 + 155582827 155582867 41 TCCATCTCTTTAGGTGGTGACAGCAGGAGCAATCATCCCTT TCCATCTCTTTAGGTGGTGACATCAGGAGCAATCATCCCTT < 41bp 0.761101810693984 0.42930164081702 0.41500315 0.3307454 prediction 0.522203621387968 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582847 chr1:155582849 nonsynonymous SNV 0.736 3 23 hm5C_associated_SNPs_61971 0 0 1 PRPF8 POSTAR2 ENCODE chr1:155582825-155582869
64251 chr5 149431464 149431464 1 + A C UCEC 149431460 + 149431440 149431480 41 CCACTCCTTGGCCCTGTGCCCTGAATTGGCACCTTACGCAA CCACTCCTTGGCCCTGTGCCCTGACTTGGCACCTTACGCAA < 41bp 0.761096637274481 0.352407116546127 0.033428162 0.011390954 prediction 0.522193274548963 Functional Loss - HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149431460 chr5:149431464 nonsynonymous SNV 0.557 1 25 hm5C_associated_SNPs_61972 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:149431455-149431504
64251 chr3 10960043 10960043 1 + G T SARC 10960041 + 10960021 10960061 41 ATCATGCTCTGTTGCCTGAACAGCGGCACCAGCTTCGTGGC ATCATGCTCTGTTGCCTGAACATCGGCACCAGCTTCGTGGC < 41bp 0.76108867212189 0.409024691816373 0.5846733 0.17208189 prediction 0.522177344243779 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10960041 chr3:10960043 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_61973 0 0 1 SND1 POSTAR2 ENCODE chr3:10960027-10960079
64251 chr19 47880460 47880460 1 + C T SKCM 47880458 + 47880438 47880478 41 ACTGCGTCCGCATCCCTGCCCTCCAGGTGGGCCTCTGCCCC ACTGCGTCCGCATCCCTGCCCTTCAGGTGGGCCTCTGCCCC < 41bp 0.804883661100613 0.543802916066902 0.9274205 0.35510653 prediction 0.522161490067423 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47880458 chr19:47880460 synonymous SNV . 0 23 hm5C_associated_SNPs_61975 0 0 5 PPIG POSTAR2 ENCODE chr19:47880400-47880462
64251 chr1 155582325 155582325 1 + C T READ 155582323 + 155582303 155582343 41 GTGGGAGCCTGGGCCTGCGACCCGAGCCACCTGTCAGCTTC GTGGGAGCCTGGGCCTGCGACCTGAGCCACCTGTCAGCTTC < 41bp 0.783302354919099 0.522228116979877 0.4810602 0.33445996 prediction 0.522148475878444 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582323 chr1:155582325 synonymous SNV . 0 23 hm5C_associated_SNPs_61976 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:155582325-155582326
64251 chr16 87678398 87678398 1 + C T GBM 87678396 + 87678376 87678416 41 GGCTTCGGCGTGAGCCAGCGCTCGGACGGGCTCAAGTACGA GGCTTCGGCGTGAGCCAGCGCTTGGACGGGCTCAAGTACGA < 41bp 0.767232095570164 0.506158913049292 0.7372927 0.66811746 prediction 0.522146365041744 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678396 chr16:87678398 nonsynonymous SNV 0.982 4 23 hm5C_associated_SNPs_61977 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr16:87678387-87678411
64251 chr2 48026014 48026014 1 + C T CESC 48026012 + 48025992 48026032 41 GAACAGCCCTGTCAAAGTTGCTCGAAAGCGGAAGAGAATGG GAACAGCCCTGTCAAAGTTGCTTGAAAGCGGAAGAGAATGG < 41bp 0.76106941569388 0.477822435540989 0.30146283 0.15690815 prediction 0.522138831387761 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026012 chr2:48026014 stopgain 0.601 0 23 hm5C_associated_SNPs_61978 3 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr2:48025991-48026027
64251 chr9 128094292 128094292 1 + G T LUAD 128094290 + 128094270 128094310 41 ACATCTGATGATACGGATGTCAGGGAGGTCAGTTCCCGCCC ACATCTGATGATACGGATGTCATGGAGGTCAGTTCCCGCCC < 41bp 0.872002882890065 0.610942544278132 0.9020808 0.8553089 prediction 0.522120677223866 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128094290 chr9:128094292 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_61979 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:128094268-128094292
64251 chr8 75277775 75277775 1 + G T rs72665430 75277773 + 75277753 75277793 41 GGAAGACAGTTTCCCTGGAGCTGGCCATGAAGGCCTTAGAA GGAAGACAGTTTCCCTGGAGCTTGCCATGAAGGCCTTAGAA < 41bp 0.761059055170649 0.451519399648255 0.45205468 0.29902887 prediction 0.522118110341297 Functional Loss - GDAP1 ENSG00000104381 UTR3 Human protein_coding chr8:75277773 chr8:75277775 . . 0 23 hm5C_associated_SNPs_61980 2 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:75277749-75277779
64251 chr6 348820 348820 1 + G T UCEC 348818 + 348798 348838 41 AGAGAGCCCTTTGCAGGATGCAGAAGAAGCCAAAAACATTC AGAGAGCCCTTTGCAGGATGCATAAGAAGCCAAAAACATTC < 41bp 0.761049664759218 0.430632652945185 0.4354079 0.1258145 prediction 0.522099329518436 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348818 chr6:348820 stopgain 0.998 1 23 hm5C_associated_SNPs_61983 0 0 2 PPIG POSTAR2 ENCODE chr6:348765-348842
64251 chr12 56528198 56528198 1 + G T CESC 56528195 + 56528175 56528215 41 TCCTACAAGACCCTCAAAGCCAGGAGCTCGATGTGCAAGTG TCCTACAAGACCCTCAAAGCCAGTAGCTCGATGTGCAAGTG < 41bp 0.912980206880482 0.651932493984013 0.8289281 0.19392723 prediction 0.522095425792938 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56528195 chr12:56528198 stopgain 0.975 1 24 hm5C_associated_SNPs_61984 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:56528183-56528207
64251 chr1 11080565 11080565 1 + G C LUAD 11080561 + 11080541 11080581 41 AGGACATGACTGAGGATGAGCTGCGGGAGTTCTTCTCTCAG AGGACATGACTGAGGATGAGCTGCCGGAGTTCTTCTCTCAG < 41bp 0.761022531402428 0.485594845817058 0.53204167 0.21064276 prediction 0.522045062804856 Functional Loss - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11080561 chr1:11080565 nonsynonymous SNV 0.967 4 25 hm5C_associated_SNPs_61991 0 0 36 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11080483-11080617
64251 chr7 36445877 36445877 1 + C T CESC 36445875 + 36445855 36445895 41 AGACCTCTGCTTTCAAATGCCTCGGCAACTCCAGTTGGCAG AGACCTCTGCTTTCAAATGCCTTGGCAACTCCAGTTGGCAG < 41bp 0.788995267107118 0.527973132952727 0.12510389 0.10646683 prediction 0.522044268308783 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36445875 chr7:36445877 nonsynonymous SNV 0.122 1 23 hm5C_associated_SNPs_61992 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr12 16042925 16042925 1 + G T UCEC 16042922 + 16042902 16042942 41 CTGGCTCATAAACACATTGTCAAGACTGTGGATTTCACGCA CTGGCTCATAAACACATTGTCAATACTGTGGATTTCACGCA < 41bp 0.761010897796921 0.402135335435769 0.10614148 0.040778577 prediction 0.522021795593842 Functional Loss - STRAP ENSG00000023734 CDS Human protein_coding chr12:16042922 chr12:16042925 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_61997 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:16042865-16042935
64251 chr10 43882716 43882716 1 - C G LUAD 43882720 - 43882700 43882740 41 CTCTGAAGTTCATGTCCGTGCAGCGGCCAGGGCCCTATGAC CTCTGAAGTTCATGTCCGTGCAGCCGCCAGGGCCCTATGAC < 41bp 0.818640787552029 0.557630945738845 0.34180325 0.17837662 prediction 0.522019683626368 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882720 chr10:43882716 nonsynonymous SNV 0.455 2 25 hm5C_associated_SNPs_61998 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882603-43882890
64251 chr21 40823924 40823924 1 + G T KIRC 40823921 + 40823901 40823941 41 ACCCCTGGGCTGCTGCCAGCCCCGACCTGGCACTTGCTTGC ACCCCTGGGCTGCTGCCAGCCCCTACCTGGCACTTGCTTGC < 41bp 0.761007738772934 0.384008155025017 0.090656996 0.036459744 prediction 0.522015477545869 Functional Loss - SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40823921 chr21:40823924 nonsynonymous SNV 0.133 1 24 hm5C_associated_SNPs_62000 0 0 1 DDX3X POSTAR2 ENCODE chr21:40823878-40823960
64251 chr8 42218836 42218836 1 + G C COAD 42218832 + 42218812 42218852 41 GGTGCAGAGTCCAGTGGTGACATGGATGTTCTCCTGACCCA GGTGCAGAGTCCAGTGGTGACATGCATGTTCTCCTGACCCA < 41bp 0.761005122017812 0.467511257620168 0.33987308 0.28759325 prediction 0.522010244035624 Functional Loss - POLB ENSG00000070501 CDS Human protein_coding chr8:42218832 chr8:42218836 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_62001 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:42218832-42218867
64251 chrX 23801347 23801347 1 + G T rs17551556 23801344 + 23801324 23801364 41 TCCGTCACTCGCCGAGGTTCCTTGGGTCATGGTGCCAGCCT TCCGTCACTCGCCGAGGTTCCTTTGGTCATGGTGCCAGCCT < 41bp 0.760998737552341 0.38254445100768 0.1075449 0.012859762 prediction 0.521997475104683 Functional Loss - SAT1 ENSG00000130066 UTR5 Human protein_coding chrX:23801344 chrX:23801347 . . 0 24 hm5C_associated_SNPs_62002 0 0 42 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:23801280-23801400
64251 chr8 22874895 22874895 1 + G T LUAD 22874893 + 22874873 22874913 41 ACCTCAAGCGGCAGCCCAAACGGCGTTGGCTCTTCTGGAAC ACCTCAAGCGGCAGCCCAAACGTCGTTGGCTCTTCTGGAAC < 41bp 0.867174643699018 0.606180478415281 0.8707056 0.2547561 prediction 0.521988330567473 Functional Loss - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22874893 chr8:22874895 synonymous SNV . 0 23 hm5C_associated_SNPs_62006 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:22874886-22874927
64251 chr19 16791334 16791334 1 + C T UCEC 16791332 + 16791312 16791352 41 AGATCGCGGTGGGCATCCATCACGCCCATCACCACTACCAC AGATCGCGGTGGGCATCCATCATGCCCATCACCACTACCAC < 41bp 0.761027691470062 0.50003451656148 0.80148804 0.49730307 prediction 0.521986349817164 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16791332 chr19:16791334 synonymous SNV . 0 23 hm5C_associated_SNPs_62007 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:16791333-16791366
64251 chr1 210591627 210591627 1 + A T LIHC 210591623 + 210591603 210591643 41 CTGATGTACATGCATGCCATCTACAGCAGCATCCCCCTCCT CTGATGTACATGCATGCCATCTACTGCAGCATCCCCCTCCT < 41bp 0.760988415127614 0.436774039361531 0.3045466 0.062820554 prediction 0.521976830255228 Functional Loss - HHAT ENSG00000054392 CDS Human protein_coding chr1:210591623 chr1:210591627 nonsynonymous SNV 0.869 2 25 hm5C_associated_SNPs_62008 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:210591614-210591645
64251 chr2 183581160 183581160 1 + A T rs530674162 183581156 + 183581136 183581176 41 CTCGGCCAGGCGGGGTCCGCCGCCAGGGTTTGAGGATGGGG CTCGGCCAGGCGGGGTCCGCCGCCTGGGTTTGAGGATGGGG < 41bp 0.781927993170549 0.520953363608359 0.1697138 0.07372218 prediction 0.52194925912438 Functional Loss - DNAJC10 ENSG00000077232 UTR5 Human protein_coding chr2:183581156 chr2:183581160 . . 0 25 hm5C_associated_SNPs_62012 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:183581160-183581180
64251 chr17 2577537 2577537 1 + T C STAD 2577536 + 2577516 2577556 41 GGTAGAATGCATTTCCTGGGCTCCAGAAAGCTCATATTCCT GGTAGAATGCATTTCCTGGGCCCCAGAAAGCTCATATTCCT < 41bp 0.773889820549078 0.512920063154747 0.2455633 0.049592465 prediction 0.521939514788662 Functional Loss - PAFAH1B1 ENSG00000007168 CDS Human protein_coding chr17:2577536 chr17:2577537 synonymous SNV . 0 22 hm5C_associated_SNPs_62013 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:2577502-2577544
64251 chr13 98086899 98086899 1 + G C OV 98086895 + 98086875 98086915 41 TCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTT TCGGTGCTGGAGATCCTGGACACGCCGGGCACCGAGCAGTT < 41bp 0.782007281197442 0.521038713669818 0.43041322 0.1175513 prediction 0.521937135055249 Functional Loss - RAP2A ENSG00000125249 CDS Human protein_coding chr13:98086895 chr13:98086899 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_62015 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr13:98086877-98086910
64251 chr2 176983853 176983853 1 + C T LUAD 176983851 + 176983831 176983871 41 ATCAGTAAGAGCGTTAACCTCACCGACAGGCAGGTCAAGAT ATCAGTAAGAGCGTTAACCTCATCGACAGGCAGGTCAAGAT < 41bp 0.777800631313899 0.51683271906573 0.1952627 0.15296715 prediction 0.52193582449634 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983851 chr2:176983853 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_62016 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176983765-176983857
64251 chr12 70637590 70637590 1 + G C rs75061729 70637589 + 70637569 70637609 41 CCTAGGCCCGGTCCCATCCGCGAGTGGTGGGGCTTCCCCAG CCTAGGCCCGGTCCCATCCGCCAGTGGTGGGGCTTCCCCAG < 41bp 0.843111261844613 0.582147948721312 0.8670778 0.6041287 prediction 0.521926626246601 Functional Loss - CNOT2 ENSG00000111596 UTR5 Human protein_coding chr12:70637589 chr12:70637590 . . 0 22 hm5C_associated_SNPs_62019 0 0 2 CSTF2T POSTAR2 ENCODE chr12:70637585-70637674
64251 chr2 70165331 70165331 1 + G C UCS 70165327 + 70165307 70165347 41 CTGACGAGCGGGGCAGCATGCAGAGCCTCGGCAGTGATGAG CTGACGAGCGGGGCAGCATGCAGACCCTCGGCAGTGATGAG < 41bp 0.760957348146753 0.478608299892087 0.87994355 0.5252894 prediction 0.521914696293506 Functional Loss - MXD1 ENSG00000059728 CDS Human protein_coding chr2:70165327 chr2:70165331 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_62020 0 0 5 GRWD1 POSTAR2 ENCODE chr2:70165221-70165354
64251 chr15 59409033 59409033 1 + G T UCEC 59409030 + 59409010 59409050 41 CTTATACCAGTTCCCAAATCCGAGAAATGGAAACTCTAATT CTTATACCAGTTCCCAAATCCGATAAATGGAAACTCTAATT < 41bp 0.760950168460994 0.387485836878826 0.23070577 0.026056737 prediction 0.521900336921987 Functional Loss - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59409030 chr15:59409033 stopgain 1.000 1 24 hm5C_associated_SNPs_62025 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:59409012-59409034
64251 chr2 29072759 29072759 1 - C A UCEC 29072762 - 29072742 29072782 41 TCCATAGATTTGTCTTTCTTCAAGAAATTAGTTTTCTTTCC TCCATAGATTTGTCTTTCTTCAATAAATTAGTTTTCTTTCC < 41bp 0.843841079463587 0.582899282686261 0.35148144 0.24750555 prediction 0.521883593554652 Functional Loss - SPDYA ENSG00000163806 CDS Human protein_coding chr2:29072762 chr2:29072759 nonsynonymous SNV 0.967 0 24 hm5C_associated_SNPs_62030 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:29072695-29072763
64251 chr8 144732869 144732869 1 + C T STAD 144732867 + 144732847 144732887 41 GGGAAATCCTTCATAAGGAGCTCGAGCCTCATTCGCCATTA GGGAAATCCTTCATAAGGAGCTTGAGCCTCATTCGCCATTA < 41bp 0.773035161658169 0.512096296887172 0.30605912 0.31961304 prediction 0.521877729541993 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732867 chr8:144732869 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_62033 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:144732849-144732872
64251 chr20 60697816 60697816 1 + G C LUSC 60697815 + 60697795 60697835 41 GAGGGCATTCTCTACACCATCGACACCGACAACTCCACCGT GAGGGCATTCTCTACACCATCCACACCGACAACTCCACCGT < 41bp 0.832617406896297 0.571681251925887 0.047907293 0.009117216 prediction 0.521872309940819 Functional Loss - LSM14B ENSG00000149657 CDS Human protein_coding chr20:60697815 chr20:60697816 nonsynonymous SNV 0.781 3 22 hm5C_associated_SNPs_62035 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:60697799-60697816
64251 chr11 126176543 126176543 1 + G T LUSC 126176540 + 126176520 126176560 41 AGACGCCATTTCAGGTGGAACAGGTGGCTCAGCTCCTGACG AGACGCCATTTCAGGTGGAACAGTTGGCTCAGCTCCTGACG < 41bp 0.760934531059933 0.354109060197063 0.903834 0.39659977 prediction 0.521869062119866 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126176540 chr11:126176543 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_62036 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:126176531-126176558
64251 chr16 57778405 57778405 1 + G C BLCA 57778401 + 57778381 57778421 41 CAGTCGGGCTCCATCCGTGTCTGGGACCTGGAAGCTGCCAA CAGTCGGGCTCCATCCGTGTCTGGCACCTGGAAGCTGCCAA < 41bp 0.817004426946361 0.556070061299255 0.14854237 0.07490829 prediction 0.521868731294212 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57778401 chr16:57778405 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_62037 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:57778365-57778420
64251 chr4 57883833 57883833 1 + T C LIHC 57883832 + 57883812 57883852 41 GGCCCATGTTCTCTATTATCCTCAAAAGCCACTTGTGACTA GGCCCATGTTCTCTATTATCCCCAAAAGCCACTTGTGACTA < 41bp 0.767988570244169 0.507083661196865 0.23110881 0.32802093 prediction 0.521809818094608 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57883832 chr4:57883833 synonymous SNV . 0 22 hm5C_associated_SNPs_62045 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:57883804-57883839
64251 chr4 88379074 88379074 1 + G T SARC 88379072 + 88379052 88379092 41 GGGTGGACATCAATGATAAACTGAAGCTTTATGCCAGTCAC GGGTGGACATCAATGATAAACTTAAGCTTTATGCCAGTCAC < 41bp 0.838740455554457 0.577836154987119 0.18464506 0.18729618 prediction 0.521808601134677 Functional Loss - NUDT9 ENSG00000170502 CDS Human protein_coding chr4:88379072 chr4:88379074 synonymous SNV . 0 23 hm5C_associated_SNPs_62046 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:88379047-88379074
64251 chr6 43488482 43488482 1 + C T GBM 43488480 + 43488460 43488500 41 GGAGTTGAGCAGGTGCTTCTCACCTGGTGTTATTGAGGTGC GGAGTTGAGCAGGTGCTTCTCATCTGGTGTTATTGAGGTGC < 41bp 0.786725095846026 0.525823132037677 0.41272402 0.3573486 prediction 0.521803927616697 Functional Loss - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488480 chr6:43488482 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_62048 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:43488470-43488508
64251 chr1 53322907 53322907 1 + C T rs566249078 53322905 + 53322885 53322925 41 CTCCAGTGTCTCCTGTTAGACTCGACAAGCATCCCTCAAAA CTCCAGTGTCTCCTGTTAGACTTGACAAGCATCCCTCAAAA < 41bp 0.760886361268366 0.473462335330329 0.2764857 0.15784094 prediction 0.521772722536732 Functional Loss - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53322905 chr1:53322907 nonsynonymous SNV 0.506 3 23 hm5C_associated_SNPs_62049 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:53322888-53322914
64251 chr17 1629820 1629820 1 + G T UCEC 1629817 + 1629797 1629837 41 CAGCCTGGTGCAGCTCCAGCCAGGAGTTCGTAGCTGCCCAC CAGCCTGGTGCAGCTCCAGCCAGTAGTTCGTAGCTGCCCAC < 41bp 0.903331881439475 0.642447056730475 0.93392074 0.46789137 prediction 0.521769649418001 Functional Loss - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1629817 chr17:1629820 stopgain 0.991 0 24 hm5C_associated_SNPs_62050 0 0 1 EIF3H POSTAR2 ENCODE chr17:1629767-1629835
64251 chr10 121203156 121203156 1 + C T COAD 121203154 + 121203134 121203174 41 TCGAGGGCCAGTCGCCGTTCCGCGGCCGCAAGGAGAAGGTG TCGAGGGCCAGTCGCCGTTCCGTGGCCGCAAGGAGAAGGTG < 41bp 0.766100937713834 0.505236133663874 0.75691634 0.48554295 prediction 0.521729608099921 Functional Loss - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121203154 chr10:121203156 synonymous SNV . 0 23 hm5C_associated_SNPs_62053 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:121203154-121203211
64251 chr16 87678279 87678279 1 + G T LUAD 87678277 + 87678257 87678297 41 ACATCCACTCCACCATCAGCCTGGGCGAGGCTGAGGCCGAG ACATCCACTCCACCATCAGCCTTGGCGAGGCTGAGGCCGAG < 41bp 0.760856045745897 0.408222015422817 0.55237275 0.12694317 prediction 0.521712091491795 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678277 chr16:87678279 synonymous SNV . 0 23 hm5C_associated_SNPs_62055 0 0 1 LIN28A POSTAR2 GSE39873,GSM980594 chr16:87678260-87678280
64251 chr7 5331444 5331444 1 + G T LUAD 5331442 + 5331422 5331462 41 GCTGTGGGCACCGTGGCCTTCGGCTGCACAGGTAGGAACCG GCTGTGGGCACCGTGGCCTTCGTCTGCACAGGTAGGAACCG < 41bp 0.760851194560936 0.407056920805548 0.90458256 0.31283134 prediction 0.521702389121872 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5331442 chr7:5331444 nonsynonymous SNV 0.994 5 23 hm5C_associated_SNPs_62056 0 0 3 BUD13 POSTAR2 ENCODE chr7:5331360-5331460
64251 chr8 126021463 126021463 1 + C T LUSC 126021461 + 126021441 126021481 41 GCTGAACTTATTTTAGCTAACCCGAGTCCAGTTCTCATCTA GCTGAACTTATTTTAGCTAACCTGAGTCCAGTTCTCATCTA < 41bp 0.806649757724579 0.545802740463949 0.13547924 0.21410236 prediction 0.52169403452126 Functional Loss - SQLE ENSG00000104549 CDS Human protein_coding chr8:126021461 chr8:126021463 nonsynonymous SNV 0.720 2 23 hm5C_associated_SNPs_62058 0 0 6 WDR33 POSTAR2 GSE61123,GSM1496985 chr8:126021438-126021466
64251 chr9 34241423 34241423 1 + C T SKCM 34241421 + 34241401 34241441 41 CAACAGCATCCTCACACCAACTCGGGTCAGCAGTAGTGCCA CAACAGCATCCTCACACCAACTTGGGTCAGCAGTAGTGCCA < 41bp 0.76084398617772 0.485880962191455 0.25821653 0.40796474 prediction 0.52168797235544 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241421 chr9:34241423 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_62059 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:34241420-34241440
64251 chr19 7963994 7963994 1 + G T CESC 7963991 + 7963971 7964011 41 GGCCATGGCAGGGACCGGGCCGGGGAAGGCAGGGGAGGGTG GGCCATGGCAGGGACCGGGCCGGTGAAGGCAGGGGAGGGTG < 41bp 0.918481449513291 0.657649270115688 0.9030249 0.8772688 prediction 0.521664358795207 Functional Loss - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963991 chr19:7963994 nonsynonymous SNV 0.089 0 24 hm5C_associated_SNPs_62060 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:7963957-7963997
64251 chr1 161198097 161198097 1 + G C rs61731576 161198096 + 161198076 161198116 41 GACACTGGCTGGGAAGTACTCGGGTATGGGGCGAAGTGAAG GACACTGGCTGGGAAGTACTCCGGTATGGGGCGAAGTGAAG < 41bp 0.839538293608539 0.578750463316703 0.8826611 0.3126312 prediction 0.521575660583672 Functional Loss - TOMM40L ENSG00000158882 CDS Human protein_coding chr1:161198096 chr1:161198097 synonymous SNV . 0 22 hm5C_associated_SNPs_62069 0 0 2 PRPF8 POSTAR2 ENCODE chr1:161198084-161198118
64251 chr18 47110073 47110073 1 + T C LIHC 47110072 + 47110052 47110092 41 GGAGTTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGAC GGAGTTTCGCAGCTACCTGTCCCAACCCCGCAACCCCGGAC < 41bp 0.760765490052545 0.493652642778707 0.18918726 0.14509472 prediction 0.52153098010509 Functional Loss - LIPG ENSG00000101670 CDS Human protein_coding chr18:47110072 chr18:47110073 synonymous SNV . 0 22 hm5C_associated_SNPs_62075 0 0 1 SND1 POSTAR2 ENCODE chr18:47109984-47110124
64251 chr17 48560723 48560723 1 + C T SARC 48560721 + 48560701 48560741 41 GGGCCCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCAC GGGCCCATGGACGATTTATGCCTCAGGGGGCTGGAGGCCAC < 41bp 0.817076932366585 0.556316060535729 0.30057016 0.16450664 prediction 0.521521743661712 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560721 chr17:48560723 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_62076 0 0 7 BUD13 POSTAR2 ENCODE chr17:48560710-48560762
64251 chr10 103908157 103908157 1 + C T COAD 103908155 + 103908135 103908175 41 CTGTAGTTCCTCTGGACGTTCTCGAAGATGCTCTTCCTCTT CTGTAGTTCCTCTGGACGTTCTTGAAGATGCTCTTCCTCTT < 41bp 0.821667611967252 0.560915042464327 0.42387003 0.11237773 prediction 0.52150513900585 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908155 chr10:103908157 stopgain 0.956 0 23 hm5C_associated_SNPs_62080 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:103908140-103908160
64251 chr11 76507046 76507046 1 + C T UCEC 76507044 + 76507024 76507064 41 GCCCTGCCAGCCGAGAGCTTCACCAGCTCACCCCTGAGCGA GCCCTGCCAGCCGAGAGCTTCATCAGCTCACCCCTGAGCGA < 41bp 0.774415175722038 0.513694410578792 0.11113021 0.0966053 prediction 0.521441530286493 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507044 chr11:76507046 nonsynonymous SNV 0.915 0 23 hm5C_associated_SNPs_62088 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:76507032-76507048
64251 chr20 33514942 33514942 1 + C T UCEC 33514940 + 33514920 33514960 41 TTGCTCAGAATGACCATGACCTCGGGGACATGTCTACTGTG TTGCTCAGAATGACCATGACCTTGGGGACATGTCTACTGTG < 41bp 0.760718739160513 0.48932121072988 0.10824004 0.1423442 prediction 0.521437478321026 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33514940 chr20:33514942 synonymous SNV . 0 23 hm5C_associated_SNPs_62089 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr20:33514931-33514952
64251 chr19 30936467 30936467 1 + G T HNSC 30936464 + 30936444 30936484 41 GGCGAGGAGGATGGGCTGCACGTGGGCCTGGATGAGCGGCG GGCGAGGAGGATGGGCTGCACGTTGGCCTGGATGAGCGGCG < 41bp 0.760713078932499 0.365190388358711 0.3245265 0.17479819 prediction 0.521426157864998 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936464 chr19:30936467 synonymous SNV . 0 24 hm5C_associated_SNPs_62091 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30936449-30936501
64251 chr6 17601099 17601099 1 + G C BLCA 17601095 + 17601075 17601115 41 GCCCTCCCCGCAGAGCTTCCCTTCGGGCGGCGCTGCAGTCC GCCCTCCCCGCAGAGCTTCCCTTCCGGCGGCGCTGCAGTCC < 41bp 0.777348962497533 0.516654323529479 0.11052191 0.05826676 prediction 0.521389277936107 Functional Loss - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17601095 chr6:17601099 synonymous SNV . 0 25 hm5C_associated_SNPs_62094 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:17601089-17601112
64251 chr4 129043237 129043237 1 + G T COAD 129043234 + 129043214 129043254 41 TCGAACAGGCACCCACATGTCTCGGGCAAAAATCACATCTG TCGAACAGGCACCCACATGTCTCTGGCAAAAATCACATCTG < 41bp 0.869753651586675 0.60906769974374 0.16930169 0.054033965 prediction 0.52137190368587 Functional Loss - LARP1B ENSG00000138709 CDS Human protein_coding chr4:129043234 chr4:129043237 nonsynonymous SNV 0.126 2 24 hm5C_associated_SNPs_62096 0 0 2 GRWD1 POSTAR2 ENCODE chr4:129043177-129043261
64251 chr19 57705329 57705329 1 + G T UCEC 57705327 + 57705307 57705347 41 TAGCTCAGCGGACCCTGTACCAGGAGGTGATGCTGGAAAAC TAGCTCAGCGGACCCTGTACCATGAGGTGATGCTGGAAAAC < 41bp 0.868049220342054 0.607366928954493 0.9397155 0.83119774 prediction 0.521364582775123 Functional Loss - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57705327 chr19:57705329 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_62097 0 0 3 BUD13 POSTAR2 ENCODE chr19:57705185-57705353
64251 chr1 2333730 2333730 1 + G T UCEC 2333728 + 2333708 2333748 41 TCCCGGTGTTCTGGCCGATTCTGGTGATGTACTTCATCATG TCCCGGTGTTCTGGCCGATTCTTGTGATGTACTTCATCATG < 41bp 0.760666906836916 0.434611644616404 0.18484175 0.042188495 prediction 0.521333813673831 Functional Loss - RER1 ENSG00000157916 CDS Human protein_coding chr1:2333728 chr1:2333730 nonsynonymous SNV 0.976 1 23 hm5C_associated_SNPs_62102 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2333672-2333764
64251 chr19 20003291 20003291 1 + C T KIRP 20003289 + 20003269 20003309 41 TTTACCTGGCCCTCAATCCTCTCCAAACATAAAAGAACTCA TTTACCTGGCCCTCAATCCTCTTCAAACATAAAAGAACTCA < 41bp 0.760657210018287 0.482507315463246 0.94368875 0.19517273 prediction 0.521314420036574 Functional Loss - ZNF253 ENSG00000256771 CDS Human protein_coding chr19:20003289 chr19:20003291 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_62106 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:20003263-20003295
64251 chr5 137518142 137518142 1 + C T GBM 137518140 + 137518120 137518160 41 ACTAACTCAGGGAAAACCCACACGATTCAAGGTGAGTAGTA ACTAACTCAGGGAAAACCCACATGATTCAAGGTGAGTAGTA < 41bp 0.798266885739293 0.537617104554887 0.18700305 0.21007586 prediction 0.521299562368812 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518140 chr5:137518142 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_62108 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:137518122-137518143
64251 chr6 116422064 116422064 1 + G C rs75742230 116422063 + 116422043 116422083 41 CTCCTTGCACCCTTCGCGGCCGAGGCGCTCCCTGGTGCTCC CTCCTTGCACCCTTCGCGGCCCAGGCGCTCCCTGGTGCTCC < 41bp 0.813539390952252 0.552891981742095 0.53830785 0.17343584 prediction 0.521294818420313 Functional Loss - NT5DC1 ENSG00000178425 UTR5 Human protein_coding chr6:116422063 chr6:116422064 . . 0 22 hm5C_associated_SNPs_62109 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:116422055-116422093
64251 chr17 48559752 48559752 1 + A C UCEC 48559748 + 48559728 48559768 41 GAGCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGTCCT GAGCTCGCAGCTGAGATGTACCAGCGGGGCCGGGCTGTCCT < 41bp 0.760641101721032 0.357206647315232 0.9156257 0.8443621 prediction 0.521282203442064 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48559748 chr17:48559752 synonymous SNV . 0 25 hm5C_associated_SNPs_62111 0 0 1 PPIG POSTAR2 ENCODE chr17:48559719-48559791
64251 chr16 2546162 2546162 1 + G T STAD 2546160 + 2546140 2546180 41 CAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGG CAGCGGCGCTATGGACTCTCCATGATACAACTGCTTCGTGG < 41bp 0.876773124640828 0.616139431214877 0.21609014 0.013795137 prediction 0.521267386851902 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546160 chr16:2546162 stopgain 0.721 1 23 hm5C_associated_SNPs_62112 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:2546145-2546168
64251 chr9 116811442 116811442 1 + G T STAD 116811440 + 116811420 116811460 41 CAGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTC CAGTGTACGTGACGGATTGCCGTGTGAGCACGTCCGCCTTC < 41bp 0.760625584043689 0.425095511523838 0.9101189 0.81095976 prediction 0.521251168087379 Functional Loss - ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116811440 chr9:116811442 synonymous SNV . 0 23 hm5C_associated_SNPs_62113 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:116811430-116811443
64251 chr5 121355907 121355907 1 + G T SARC 121355905 + 121355885 121355925 41 ATGATAATGGAAGTAATTTACAGCGTGAAGCAACTGTCATC ATGATAATGGAAGTAATTTACATCGTGAAGCAACTGTCATC < 41bp 0.76061526083056 0.444352065045883 0.3212259 0.03951603 prediction 0.52123052166112 Functional Loss - SRFBP1 ENSG00000151304 CDS Human protein_coding chr5:121355905 chr5:121355907 nonsynonymous SNV 0.047 0 23 hm5C_associated_SNPs_62115 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:121355890-121355931
64251 chr13 53035753 53035753 1 + G T UCEC 53035751 + 53035731 53035771 41 GAAGTCATCACAGTAATACCCGGGACACTGTGAAACAAGGC GAAGTCATCACAGTAATACCCGTGACACTGTGAAACAAGGC < 41bp 0.84954257492792 0.588954361998991 0.44171876 0.15145147 prediction 0.521176425857857 Functional Loss - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53035751 chr13:53035753 synonymous SNV . 0 23 hm5C_associated_SNPs_62119 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:53035706-53035794
64251 chr19 30308132 30308132 1 + C T UCEC 30308130 + 30308110 30308150 41 GATGACCGGGTTTACCCAAACTCAACGTGCAAGCCTCGGAT GATGACCGGGTTTACCCAAACTTAACGTGCAAGCCTCGGAT < 41bp 0.80948425682717 0.548902755645769 0.7954172 0.24767572 prediction 0.521163002362802 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30308130 chr19:30308132 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_62121 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:30308132-30308133
64251 chrX 135290787 135290787 1 + G T UCEC 135290784 + 135290764 135290804 41 GCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGTAG GCCAAGAAGTGTGCTGGATGCAATAACCCCATCACTGGTAG < 41bp 0.891181212087167 0.630601974879507 0.17163044 0.08347967 prediction 0.521158474415321 Functional Loss - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135290784 chrX:135290787 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_62122 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:135290713-135290795
64251 chr11 44146380 44146380 1 + A C PRAD 44146376 + 44146356 44146396 41 TCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAG TCCTGTCATCTCAGGTGGGTCTCCCTCCTGAGTACAGAGAG < 41bp 0.760574768807516 0.323465113894851 0.9339206 0.19843891 prediction 0.521149537615033 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44146376 chr11:44146380 nonsynonymous SNV 0.380 4 25 hm5C_associated_SNPs_62123 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:44146374-44146403
64251 chr2 27663717 27663717 1 + G T UCEC 27663715 + 27663695 27663735 41 CCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGCAGGAGGAG CCTTTGGGCTGCCTCGGCCCCATCAGCCACAGCAGGAGGAG < 41bp 0.873214995633907 0.612649230888254 0.14825222 0.057067394 prediction 0.521131529491304 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27663715 chr2:27663717 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_62125 0 0 1 RPS3 POSTAR2 ENCODE chr2:27663676-27663745
64251 chr6 16144010 16144010 1 + G T UCEC 16144008 + 16143988 16144028 41 GTCACCAAGGAATCTGGGAACAGCATCGTGCTCTTGTTTAA GTCACCAAGGAATCTGGGAACATCATCGTGCTCTTGTTTAA < 41bp 0.760552870986395 0.425644208541452 0.049116343 0.020332932 prediction 0.52110574197279 Functional Loss - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16144008 chr6:16144010 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_62127 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:16143983-16144021
64251 chr1 57378109 57378109 1 + A T LGG 57378105 + 57378085 57378125 41 ATCCACGAGGTGCTGCGGCACACAAGCCTGGGGCCTCTGGA ATCCACGAGGTGCTGCGGCACACATGCCTGGGGCCTCTGGA < 41bp 0.760551175702127 0.451565586624442 0.3357427 0.33909392 prediction 0.521102351404254 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57378105 chr1:57378109 nonsynonymous SNV 0.253 3 25 hm5C_associated_SNPs_62128 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr2 187541957 187541957 1 + G T UCEC 187541954 + 187541934 187541974 41 TTAAACGGGTCCGGCCACCTCAAGAAGAACAAGAAAGGGAG TTAAACGGGTCCGGCCACCTCAATAAGAACAAGAAAGGGAG < 41bp 0.760547805956066 0.400359582430682 0.5760111 0.17724574 prediction 0.521095611912132 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187541954 chr2:187541957 stopgain 0.999 1 24 hm5C_associated_SNPs_62129 0 0 4 AGGF1 POSTAR2 ENCODE chr2:187541929-187541988
64251 chr21 33684185 33684185 1 - C A UCEC 33684188 - 33684168 33684208 41 GGGGTGGGTCTGGAAACCCCCGAGGGGCAAGGTGGAGGAGC GGGGTGGGTCTGGAAACCCCCGATGGGCAAGGTGGAGGAGC < 41bp 0.76054285286727 0.429861795254604 0.7947147 0.084496945 prediction 0.52108570573454 Functional Loss - MRAP ENSG00000170262 CDS Human protein_coding chr21:33684188 chr21:33684185 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_62131 0 0 1 CSTF2T POSTAR2 ENCODE chr21:33684150-33684209
64251 chr4 151504938 151504938 1 + G T LUSC 151504936 + 151504916 151504956 41 CTGCCGAAACAAGTGCCTCTCAGTGCTGAAGACTCTGCGGG CTGCCGAAACAAGTGCCTCTCATTGCTGAAGACTCTGCGGG < 41bp 0.760529359242643 0.417965668067518 0.8018645 0.35410488 prediction 0.521058718485286 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504936 chr4:151504938 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_62134 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585664 chr4:151504900-151505020
64251 chr7 112090830 112090830 1 + G C LUAD 112090829 + 112090809 112090849 41 AGCAGCCGCAGCGACGGCGGCGACAGCAGGTAAGGGGTATC AGCAGCCGCAGCGACGGCGGCCACAGCAGGTAAGGGGTATC < 41bp 0.760514356466127 0.469719572218714 0.87210464 0.805723 prediction 0.521028712932253 Functional Loss - IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112090829 chr7:112090830 synonymous SNV . 0 22 hm5C_associated_SNPs_62138 0 0 2 BUD13 POSTAR2 ENCODE chr7:112090767-112090847
64251 chr3 12526188 12526188 1 + G T rs709161 12526186 + 12526166 12526206 41 CGGGACGGGGAGCCAGGCTTCCGAGTGCGCCCGGTCACTGA CGGGACGGGGAGCCAGGCTTCCTAGTGCGCCCGGTCACTGA < 41bp 0.760491632229245 0.428307876659842 0.8929932 0.43373743 prediction 0.520983264458491 Functional Loss - TSEN2 ENSG00000154743 UTR5 Human protein_coding chr3:12526186 chr3:12526188 . . 0 23 hm5C_associated_SNPs_62144 1 0 1 EFTUD2 POSTAR2 ENCODE chr3:12526090-12526195
64251 chr20 21349172 21349172 1 + G C SKCM 21349168 + 21349148 21349188 41 CACCACCACCTGTGACTTACCAGGGAAACTTATACAGGCCG CACCACCACCTGTGACTTACCAGGCAAACTTATACAGGCCG < 41bp 0.803182904945079 0.542701761225437 0.9500103 0.6478064 prediction 0.520962287439284 Functional Loss - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21349168 chr20:21349172 nonsynonymous SNV 0.657 1 25 hm5C_associated_SNPs_62147 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:21349131-21349188
64251 chr6 26217326 26217326 1 + G C LUSC 26217325 + 26217305 26217345 41 CTCCGCAAAGGCAACTACTCCGAACGAGTCGGGGCCGGCGC CTCCGCAAAGGCAACTACTCCCAACGAGTCGGGGCCGGCGC < 41bp 0.760477297198736 0.457187220888138 0.8291043 0.111653656 prediction 0.520954594397471 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217325 chr6:26217326 nonsynonymous SNV 0.025 0 22 hm5C_associated_SNPs_62148 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:26217315-26217338
64251 chr13 53227190 53227190 1 + G T GBM 53227188 + 53227168 53227208 41 GTTTTCCTGACAGGTTTTTCCAGAGCTTCTCGGATGCCCTA GTTTTCCTGACAGGTTTTTCCATAGCTTCTCGGATGCCCTA < 41bp 0.864937333781829 0.604467975925091 0.8895314 0.35620165 prediction 0.520938715713475 Functional Loss - SUGT1 ENSG00000165416 CDS Human protein_coding chr13:53227188 chr13:53227190 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_62150 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:53227180-53227200
64251 chr12 81472119 81472119 1 + G T HNSC 81472116 + 81472096 81472136 41 TCGCAGCCTCGGTGACCGACCCCGAGAGGTTCTGGGGCAAA TCGCAGCCTCGGTGACCGACCCCTAGAGGTTCTGGGGCAAA < 41bp 0.760468406629314 0.380038755901439 0.2775825 0.05231139 prediction 0.520936813258629 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81472116 chr12:81472119 stopgain 0.925 1 24 hm5C_associated_SNPs_62151 0 0 1 RPS3 POSTAR2 ENCODE chr12:81472080-81472143
64251 chr14 56645145 56645145 1 + G T ESCA 56645143 + 56645123 56645163 41 AAGGCAAATGGTGTCAAACCCAGCACCGTCCATGTGATATC AAGGCAAATGGTGTCAAACCCATCACCGTCCATGTGATATC < 41bp 0.760424491431685 0.421082349858537 0.19760889 0.057254106 prediction 0.520848982863369 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56645143 chr14:56645145 nonsynonymous SNV 0.943 2 23 hm5C_associated_SNPs_62160 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:56645135-56645156
64251 chrX 2800677 2800677 1 + A C rs1268 2800673 + 2800653 2800693 41 GTTGGATGGTCATCGGCTTTCAGAAGGAGACCACGGGAATG GTTGGATGGTCATCGGCTTTCAGACGGAGACCACGGGAATG < 41bp 0.76041585985272 0.438154513473494 0.9116816 0.8936577 prediction 0.520831719705441 Functional Loss - GYG2 ENSG00000056998 UTR3 Human protein_coding chrX:2800673 chrX:2800677 . . 0 25 hm5C_associated_SNPs_62161 0 0 2 LIN28B POSTAR2 ENCODE chrX:2800598-2800692
64251 chr15 75189921 75189921 1 + G T UCEC 75189919 + 75189899 75189939 41 CCAGCATCCTCCTGATGGTACAGGGGACAGTAATAGCCAGC CCAGCATCCTCCTGATGGTACATGGGACAGTAATAGCCAGC < 41bp 0.760413518833215 0.417385542023998 0.56045157 0.12461129 prediction 0.52082703766643 Functional Loss - MPI ENSG00000178802 CDS Human protein_coding chr15:75189919 chr15:75189921 nonsynonymous SNV 0.516 1 23 hm5C_associated_SNPs_62162 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:75189892-75189928
64251 chr11 45832509 45832509 1 + A C rs7130656 45832505 + 45832485 45832525 41 TTCTACAACAACGTCAACGCCTGCATCCTCTTCCTGCCCCT TTCTACAACAACGTCAACGCCTGCCTCCTCTTCCTGCCCCT < 41bp 0.760387508915068 0.341110131308332 0.44099858 0.07090974 prediction 0.520775017830137 Functional Loss - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832505 chr11:45832509 nonsynonymous SNV 0.542 0 25 hm5C_associated_SNPs_62170 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:45832480-45832520
64251 chr17 4801226 4801226 1 + A C rs113366718 4801222 + 4801202 4801242 41 GGGAGCAGGGAGCCCTCACTCTCCACGCCCCTTGCTTGCAT GGGAGCAGGGAGCCCTCACTCTCCCCGCCCCTTGCTTGCAT < 41bp 0.760386842148548 0.385565561818844 0.9508431 0.6941731 prediction 0.520773684297097 Functional Loss - CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801222 chr17:4801226 . . 0 25 hm5C_associated_SNPs_62171 1 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4801207-4801240
64251 chr6 43271910 43271910 1 + G T rs70953693 43271908 + 43271888 43271928 41 GGGATCGCCCTGCTGGCTGCCGGCACCGCCCTCCTGCTGCC GGGATCGCCCTGCTGGCTGCCGTCACCGCCCTCCTGCTGCC < 41bp 0.88708116760338 0.62669933046122 0.326792 0.041041017 prediction 0.52076367428432 Functional Loss - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43271908 chr6:43271910 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_62173 0 0 1 NKRF POSTAR2 ENCODE chr6:43271779-43271921
64251 chr5 140579374 140579374 1 + G T UCEC 140579372 + 140579352 140579392 41 AGAACCAAGGGACACGCACTCAGCAGATAAGGCAAGTCCTG AGAACCAAGGGACACGCACTCATCAGATAAGGCAAGTCCTG < 41bp 0.869548807977458 0.609170073749227 0.90879536 0.14321929 prediction 0.520757468456461 Functional Loss - PCDHB11 ENSG00000197479 CDS Human protein_coding chr5:140579372 chr5:140579374 nonsynonymous SNV 0.232 0 23 hm5C_associated_SNPs_62174 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:140579369-140579407
64251 chr19 52817523 52817523 1 + G T THCA 52817520 + 52817500 52817540 41 TGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGAGGAT TGTTGGAGAACTACAGGAACCTGTTCTCCCTGGGTGAGGAT < 41bp 0.760373372046963 0.385687389744362 0.68302727 0.21547028 prediction 0.520746744093926 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52817520 chr19:52817523 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_62176 0 0 1 ZNF622 POSTAR2 ENCODE chr19:52817423-52817533
64251 chr1 27121660 27121660 1 + G T BLCA 27121657 + 27121637 27121677 41 ATCTTGGATTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTC ATCTTGGATTCCTCAGTCCTCAGTTGTTTGTGTACGTGGTC < 41bp 0.760368110249815 0.366545382167517 0.85113555 0.18595776 prediction 0.52073622049963 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121657 chr1:27121660 nonsynonymous SNV 0.976 3 24 hm5C_associated_SNPs_62177 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:27121639-27121689
64251 chr14 39649880 39649880 1 + G T UCEC 39649878 + 39649858 39649898 41 AGAGGAAGAGTTGGAGGAGACAGGTAATCAGCACAATGATG AGAGGAAGAGTTGGAGGAGACATGTAATCAGCACAATGATG < 41bp 0.760347745189644 0.426804173973797 0.3396076 0.08186975 prediction 0.520695490379288 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39649878 chr14:39649880 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62182 0 0 39 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr14:39649880-39649900
64251 chr17 79213403 79213403 1 + G T rs374420845 79213400 + 79213380 79213420 41 GGCAGGTGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCCT GGCAGGTGCGTGCAGGCCTCCACTGCCCCGGGCGGCCGCCT < 41bp 0.907843155882752 0.647497956331391 0.4343689 0.32797873 prediction 0.520690399102723 Functional Loss - NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213400 chr17:79213403 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_62184 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr17 4700737 4700737 1 + T C HNSC 4700736 + 4700716 4700756 41 ATTCTGCCATCCTGCAGGTCCTACATCGCCAATCGAGTGAC ATTCTGCCATCCTGCAGGTCCCACATCGCCAATCGAGTGAC < 41bp 0.761362231880611 0.501021174440688 0.20506456 0.0029869378 prediction 0.520682114879845 Functional Loss - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4700736 chr17:4700737 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_62185 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4700731-4700769
64251 chr6 31795561 31795561 1 + G C rs11576013 31795560 + 31795540 31795580 41 CGAGGGTCCGCTTCGTCTTTCGAGAGTGACTCCCGCGGTCC CGAGGGTCCGCTTCGTCTTTCCAGAGTGACTCCCGCGGTCC < 41bp 0.824897886894403 0.564567455404149 0.92149556 0.90812784 prediction 0.520660862980507 Functional Loss - HSPA1B ENSG00000204388 UTR5 Human protein_coding chr6:31795560 chr6:31795561 . . 0 22 hm5C_associated_SNPs_62186 0 0 44 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:31795500-31795600
64251 chr1 110038635 110038635 1 + C T SKCM 110038633 + 110038613 110038653 41 AGGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCC AGGCACTGTGTGGGCTCTGCCTTCTTTGTCCCCGGGCAGCC < 41bp 0.763434111515311 0.50312328471611 0.055154383 0.08787477 prediction 0.520621653598401 Functional Loss - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110038633 chr1:110038635 synonymous SNV . 0 23 hm5C_associated_SNPs_62190 0 0 1 RBM15 POSTAR2 ENCODE chr1:110038536-110038680
64251 chr13 113783854 113783854 1 + C T BLCA 113783852 + 113783832 113783872 41 AAGAGATGAAGAAAGGACACCTCGAAAGAGAGTGCATGGAA AAGAGATGAAGAAAGGACACCTTGAAAGAGAGTGCATGGAA < 41bp 0.817368281824668 0.557057913902438 0.2649337 0.011082411 prediction 0.520620735844459 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113783852 chr13:113783854 synonymous SNV . 0 23 hm5C_associated_SNPs_62192 0 0 1 RPS3 POSTAR2 ENCODE chr13:113783841-113783870
64251 chr10 75529721 75529721 1 + C T rs76327331 75529719 + 75529699 75529739 41 TATGTCCGACAGCTAGTTACCTCCATGGATGTGACTGAGAC TATGTCCGACAGCTAGTTACCTTCATGGATGTGACTGAGAC < 41bp 0.837313365508364 0.577032041031651 0.96357965 0.12602353 prediction 0.520562648953426 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529719 chr10:75529721 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_62200 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:75529679-75529746
64251 chr4 170634271 170634271 1 + C T UCEC 170634269 + 170634249 170634289 41 AGAAGGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGC AGAAGGTATCGTTGGCAGTTCTTGGGTGTGTTTTGCACAGC < 41bp 0.802344184150058 0.542075724754436 0.19273698 0.19214326 prediction 0.520536918791243 Functional Loss - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170634269 chr4:170634271 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_62202 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr4:170634250-170634278
64251 chr8 86041560 86041560 1 + C T UCEC 86041558 + 86041538 86041578 41 ACCTTAAACACTTAAGAACCCTCGAAAAAACATTAGAAAAA ACCTTAAACACTTAAGAACCCTTGAAAAAACATTAGAAAAA < 41bp 0.760257546634977 0.478974547768894 0.18453231 0.025338024 prediction 0.520515093269955 Functional Loss - LRRCC1 ENSG00000133739 CDS Human protein_coding chr8:86041558 chr8:86041560 synonymous SNV . 0 23 hm5C_associated_SNPs_62205 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr8:86041542-86041563
64251 chr15 52074960 52074960 1 + G T UCEC 52074957 + 52074937 52074977 41 TGAGGGAATTTGCAAAGGCTCTGGAGACCAACACTCACGTG TGAGGGAATTTGCAAAGGCTCTGTAGACCAACACTCACGTG < 41bp 0.90643618291746 0.646183164441852 0.22936004 0.065591425 prediction 0.520506036951216 Functional Loss - TMOD2 ENSG00000128872 CDS Human protein_coding chr15:52074957 chr15:52074960 stopgain 0.995 1 24 hm5C_associated_SNPs_62207 0 0 2 ZNF622 POSTAR2 ENCODE chr15:52074925-52075026
64251 chr3 100455521 100455521 1 + C T UCEC 100455519 + 100455499 100455539 41 AGGCGTTCAGCCACAGCAGCCACCATATACAGGAGCTCAGA AGGCGTTCAGCCACAGCAGCCATCATATACAGGAGCTCAGA < 41bp 0.760252684106187 0.471854320382722 0.16195735 0.11819297 prediction 0.520505368212373 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100455519 chr3:100455521 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_62208 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:100455453-100455546
64251 chr17 4060602 4060602 1 + A C rs190648638 4060598 + 4060578 4060618 41 AGTACTGGTCAGCTTTTCAACACTATTCCCTTTGACCTACT AGTACTGGTCAGCTTTTCAACACTCTTCCCTTTGACCTACT < 41bp 0.760248949702777 0.366942867152328 0.072625786 0.098314196 prediction 0.520497899405554 Functional Loss - CYB5D2 ENSG00000167740 UTR3 Human protein_coding chr17:4060598 chr17:4060602 . . 0 25 hm5C_associated_SNPs_62209 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr17:4060589-4060611
64251 chr7 56020994 56020994 1 + G T UCEC 56020991 + 56020971 56021011 41 TGAGAGTGACCAGGCTTGTTCTGGATCCCTATTTATTAAAG TGAGAGTGACCAGGCTTGTTCTGTATCCCTATTTATTAAAG < 41bp 0.898774675414683 0.638530578457388 0.5275835 0.07258439 prediction 0.52048819391459 Functional Loss - MRPS17 ENSG00000239789;ENSG00000249773 CDS Human other chr7:56020991 chr7:56020994 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62211 0 0 1 PRPF8 POSTAR2 ENCODE chr7:56020977-56021055
64251 chr15 90784881 90784881 1 + C T HNSC 90784879 + 90784859 90784899 41 CTGGAGGCCATTTGCATCTGCTCCAGGACCTCCCAGCTCCT CTGGAGGCCATTTGCATCTGCTTCAGGACCTCCCAGCTCCT < 41bp 0.760238220864229 0.486634094981118 0.8669055 0.08133972 prediction 0.520476441728458 Functional Loss - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90784879 chr15:90784881 synonymous SNV . 0 23 hm5C_associated_SNPs_62214 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:90784878-90784937
64251 chr3 50098640 50098640 1 + G C BLCA 50098639 + 50098619 50098659 41 ACTGGTCTTCAGATACAAATCGACAAGGACAACAGTGTAAG ACTGGTCTTCAGATACAAATCCACAAGGACAACAGTGTAAG < 41bp 0.760232040295414 0.469285156188833 0.16597465 0.0714508 prediction 0.520464080590829 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50098639 chr3:50098640 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_62220 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:50098610-50098640
64251 chr3 50098643 50098643 1 + A T LUSC 50098639 + 50098619 50098659 41 ACTGGTCTTCAGATACAAATCGACAAGGACAACAGTGTAAG ACTGGTCTTCAGATACAAATCGACTAGGACAACAGTGTAAG < 41bp 0.760232040295414 0.429572274685485 0.16597465 0.23438326 prediction 0.520464080590829 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50098639 chr3:50098643 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_62221 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:50098608-50098678
64251 chr1 3396428 3396428 1 + G T UCEC 3396425 + 3396405 3396445 41 TTCTTCGCGAAGCAAGCAGACGAGGTCACACTGCAGCAGGC TTCTTCGCGAAGCAAGCAGACGATGTCACACTGCAGCAGGC < 41bp 0.760227822245402 0.367768351627824 0.55030787 0.09167686 prediction 0.520455644490804 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3396425 chr1:3396428 nonsynonymous SNV 0.184 4 24 hm5C_associated_SNPs_62222 0 0 1 PPIG POSTAR2 ENCODE chr1:3396413-3396479
64251 chr2 159481810 159481810 1 + G T LUAD 159481808 + 159481788 159481828 41 GTCGTCGTCCCCCAAACGCTCAGGGATGACCGCCGTACCAC GTCGTCGTCCCCCAAACGCTCATGGATGACCGCCGTACCAC < 41bp 0.857784753190704 0.597557126083012 0.9400431 0.8908034 prediction 0.520455254215384 Functional Loss - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159481808 chr2:159481810 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_62223 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:159481805-159481831
64251 chr2 44016845 44016845 1 + C T LUSC 44016843 + 44016823 44016863 41 GACTTAATCAGCATACCCATCACAGGTGACACCTTACGGTA GACTTAATCAGCATACCCATCATAGGTGACACCTTACGGTA < 41bp 0.775535298476986 0.515310241277424 0.3998677 0.3644116 prediction 0.520450114399123 Functional Loss - DYNC2LI1 ENSG00000138036 CDS Human protein_coding chr2:44016843 chr2:44016845 nonsynonymous SNV 0.958 3 23 hm5C_associated_SNPs_62225 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:44016823-44016847
64251 chr15 22969226 22969226 1 + C T GBM 22969224 + 22969204 22969244 41 GCTGCTGAGCCGGTACCTGACGCTGGACGGCTTCGACGCCA GCTGCTGAGCCGGTACCTGACGTTGGACGGCTTCGACGCCA < 41bp 0.77243009114942 0.512209615098177 0.52335435 0.6942339 prediction 0.520440952102485 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22969224 chr15:22969226 synonymous SNV . 0 23 hm5C_associated_SNPs_62226 0 0 1 FXR2 POSTAR2 ENCODE chr15:22969199-22969318
64251 chr6 47445789 47445789 1 + A C rs1056434 47445785 + 47445765 47445805 41 GTCGCCGCCTTTGCCTCTGCCTCGAGGGCCGCGCTGAAGAG GTCGCCGCCTTTGCCTCTGCCTCGCGGGCCGCGCTGAAGAG < 41bp 0.853480893812759 0.593279072583758 0.6831684 0.08742425 prediction 0.520403642458001 Functional Loss - CD2AP ENSG00000198087 UTR5 Human protein_coding chr6:47445785 chr6:47445789 . . 0 25 hm5C_associated_SNPs_62228 1 0 11 BUD13 POSTAR2 ENCODE chr6:47445708-47445886
64251 chr10 75542190 75542190 1 + G C HNSC 75542189 + 75542169 75542209 41 GGGCTTCCTCGATTGTGCCGCGAGGGCTCAGGTGACCGATG GGGCTTCCTCGATTGTGCCGCCAGGGCTCAGGTGACCGATG < 41bp 0.841869649716853 0.581676435730873 0.91940767 0.88854027 prediction 0.52038642797196 Functional Loss - CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542189 chr10:75542190 synonymous SNV . 0 22 hm5C_associated_SNPs_62229 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:75542124-75542206
64251 chr11 810306 810306 1 + G T UCEC 810303 + 810283 810323 41 TCCCCCAGCGCCAAGGACATCAAGAAGATCTTGGACAGCGT TCCCCCAGCGCCAAGGACATCAATAAGATCTTGGACAGCGT < 41bp 0.908120698569665 0.647933665969856 0.20550823 0.14202604 prediction 0.520374065199619 Functional Loss - RPLP2 ENSG00000177600 CDS Human protein_coding chr11:810303 chr11:810306 nonsynonymous SNV 0.967 4 24 hm5C_associated_SNPs_62231 0 0 70 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:810231-810352
64251 chr4 88903818 88903818 1 + A C UCEC 88903814 + 88903794 88903834 41 GATGACCAGAGTGCTGAAACCCACAGCCACAAGCAGTCCAG GATGACCAGAGTGCTGAAACCCACCGCCACAAGCAGTCCAG < 41bp 0.760184589898088 0.357333637763375 0.069705665 0.048794806 prediction 0.520369179796176 Functional Loss - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903814 chr4:88903818 nonsynonymous SNV 0.042 1 25 hm5C_associated_SNPs_62232 0 0 3 RPS3 POSTAR2 ENCODE chr4:88903775-88903826
64251 chr14 101201115 101201115 1 + A C LUAD 101201111 + 101201091 101201131 41 TGCGCTACAACCACATGCTGCGGAAGAAGAAGAACCTGCTG TGCGCTACAACCACATGCTGCGGACGAAGAAGAACCTGCTG < 41bp 0.760182720496615 0.361353690163451 0.8976675 0.85594416 prediction 0.520365440993229 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101201111 chr14:101201115 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_62233 0 0 7 IGF2BP1 POSTAR2 ENCODE chr14:101201058-101201124
64251 chr1 1336361 1336361 1 + G T rs559819406 1336359 + 1336339 1336379 41 CTGTCCTTGACCCTGTTGTCCAGGACTGTTTACCAAGGGCT CTGTCCTTGACCCTGTTGTCCATGACTGTTTACCAAGGGCT < 41bp 0.849276699484755 0.589096719653249 0.47426024 0.10022277 prediction 0.520359959663013 Functional Loss - LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336359 chr1:1336361 . . 0 23 hm5C_associated_SNPs_62234 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:1336336-1336366
64251 chr2 54844783 54844783 1 + G T LUAD 54844781 + 54844761 54844801 41 ATTCACAATTTCACCACTAGCTGGAGGGACGGCATGGCCTT ATTCACAATTTCACCACTAGCTTGAGGGACGGCATGGCCTT < 41bp 0.76017954964724 0.436520001642869 0.30829826 0.12730396 prediction 0.520359099294481 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54844781 chr2:54844783 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62235 0 0 3 FXR2 POSTAR2 ENCODE chr2:54844770-54844816
64251 chr19 10220370 10220370 1 + G T LUAD 10220367 + 10220347 10220387 41 ACAACCCCGACTCCCAGGAGCTGGACTTCCGCCACTAGTGA ACAACCCCGACTCCCAGGAGCTGTACTTCCGCCACTAGTGA < 41bp 0.76016043763332 0.359940965858975 0.1857715 0.05353865 prediction 0.52032087526664 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10220367 chr19:10220370 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_62240 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10220355-10220380
64251 chr12 2907949 2907949 1 + C T BLCA 2907947 + 2907927 2907967 41 TCATTCGCAGAATACAGACTCGCGGTGAAGGCTATGCTAAG TCATTCGCAGAATACAGACTCGTGGTGAAGGCTATGCTAAG < 41bp 0.769929145412514 0.509768915083457 0.67111963 0.83867395 prediction 0.520320460658113 Functional Loss - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2907947 chr12:2907949 synonymous SNV . 0 23 hm5C_associated_SNPs_62241 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr12:2907935-2907956
64251 chr19 50979855 50979855 1 + G C rs371934738 50979854 + 50979834 50979874 41 GCTCCTGCTCTTGCTGATGGCGGTAGCAGCGCCCAGTCGAG GCTCCTGCTCTTGCTGATGGCCGTAGCAGCGCCCAGTCGAG < 41bp 0.773675443979364 0.513518431823767 0.9008621 0.6107827 prediction 0.520314024311194 Functional Loss - EMC10 ENSG00000161671 CDS Human protein_coding chr19:50979854 chr19:50979855 synonymous SNV . 0 22 hm5C_associated_SNPs_62242 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:50979855-50979856
64251 chr2 220400033 220400033 1 + G C BLCA 220400032 + 220400012 220400052 41 GCGAGGAAGTACAACCGCAACGAGACCTACATACGGTATGT GCGAGGAAGTACAACCGCAACCAGACCTACATACGGTATGT < 41bp 0.760148999771751 0.460172988870367 0.4501191 0.35125023 prediction 0.520297999543502 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220400032 chr2:220400033 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_62243 0 0 1 SRSF1 POSTAR2 ENCODE chr2:220399966-220400039
64251 chr8 21890671 21890671 1 + C T LUAD 21890669 + 21890649 21890689 41 GGTAGGAGTGCAGCTTTCTCCCCCAGTTACTTTCCAGCTCC GGTAGGAGTGCAGCTTTCTCCCTCAGTTACTTTCCAGCTCC < 41bp 0.768870584609483 0.508732502695899 0.40990603 0.26503432 prediction 0.520276163827168 Functional Loss - NPM2 ENSG00000158806 CDS Human protein_coding chr8:21890669 chr8:21890671 nonsynonymous SNV 0.977 2 23 hm5C_associated_SNPs_62245 0 0 1 U2AF2 POSTAR2 ENCODE chr8:21890625-21890671
64251 chr17 72764365 72764365 1 + C T PAAD 72764363 + 72764343 72764383 41 GTGAGATCCGCCTCCAGTGACACCAGCGAGGAGGTAGGCCA GTGAGATCCGCCTCCAGTGACATCAGCGAGGAGGTAGGCCA < 41bp 0.764882069553557 0.504745534116428 0.64640987 0.5872954 prediction 0.52027307087426 Functional Loss - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764363 chr17:72764365 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_62246 0 0 2 PPIG POSTAR2 ENCODE chr17:72764309-72764372
64251 chr12 7310217 7310217 1 + C T BLCA 7310215 + 7310195 7310235 41 GCCGGCGGGCCTCCAGGGGCCTCCAGTGACCCCAAGGACCC GCCGGCGGGCCTCCAGGGGCCTTCAGTGACCCCAAGGACCC < 41bp 0.815271521118311 0.555146697987552 0.9523562 0.43748474 prediction 0.52024964626152 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7310215 chr12:7310217 nonsynonymous SNV 0.796 3 23 hm5C_associated_SNPs_62248 0 0 5 DDX6 POSTAR2 ENCODE chr12:7310189-7310235
64251 chr7 150746190 150746190 1 + A T rs537752884 150746186 + 150746166 150746206 41 GCTACTACAGGGAGTTCCACCACCAGACTGCCCTGGATGAG GCTACTACAGGGAGTTCCACCACCTGACTGCCCTGGATGAG < 41bp 0.86331051937453 0.603185716890171 0.17232871 0.18264902 prediction 0.520249604968718 Functional Loss - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746186 chr7:150746190 nonsynonymous SNV 0.906 0 25 hm5C_associated_SNPs_62249 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:150746182-150746203
64251 chr1 113197139 113197139 1 + G T LIHC 113197136 + 113197116 113197156 41 TAATAGCAGATTTTTAGATCCAAGAAACAAAATTTCCTTTA TAATAGCAGATTTTTAGATCCAATAAACAAAATTTCCTTTA < 41bp 0.760123781609946 0.400353898276083 0.27550614 0.38808396 prediction 0.520247563219892 Functional Loss - CAPZA1 ENSG00000116489 CDS Human protein_coding chr1:113197136 chr1:113197139 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_62250 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:113197139-113197171
64251 chr5 177631564 177631564 1 + G C rs370707939 177631560 + 177631540 177631580 41 CGGCACCGCGCGGGACGGAGCTTGGCTGTTGGTCGGTGGGT CGGCACCGCGCGGGACGGAGCTTGCCTGTTGGTCGGTGGGT < 41bp 0.760116713978111 0.497310232418728 0.24232355 0.15726715 prediction 0.520233427956223 Functional Loss - HNRNPAB ENSG00000197451 UTR5 Human protein_coding chr5:177631560 chr5:177631564 . . 0 25 hm5C_associated_SNPs_62251 0 0 39 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:177631520-177631600
64251 chr16 81069691 81069691 1 + G C rs200817365 81069690 + 81069670 81069710 41 GGGGGAGCTGATCCAGCCGTCGGTGAGCGAGCTGTCCCGGG GGGGGAGCTGATCCAGCCGTCCGTGAGCGAGCTGTCCCGGG < 41bp 0.760112191984948 0.465860253424219 0.7780129 0.5573974 prediction 0.520224383969896 Functional Loss - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81069690 chr16:81069691 synonymous SNV . 0 22 hm5C_associated_SNPs_62253 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr16:81069679-81069721
64251 chr5 159476548 159476548 1 + G T UCEC 159476546 + 159476526 159476566 41 CAATTAAACCCCAGCTATATCAGGGCAATATTGAGGAGAGC CAATTAAACCCCAGCTATATCATGGCAATATTGAGGAGAGC < 41bp 0.760101335541583 0.431036067324218 0.92403543 0.82101476 prediction 0.520202671083166 Functional Loss - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159476546 chr5:159476548 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_62257 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:159476520-159476558
64251 chr1 161135182 161135182 1 + G T SARC 161135180 + 161135160 161135200 41 AGTGAAAACCAGGTGGCATCCAGCGAGGGCTACGTGCTGTT AGTGAAAACCAGGTGGCATCCATCGAGGGCTACGTGCTGTT < 41bp 0.869366276116116 0.609282126510092 0.75457156 0.23401088 prediction 0.520168299212048 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161135180 chr1:161135182 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_62261 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161135147-161135259
64251 chr1 84948636 84948636 1 + G T SARC 84948634 + 84948614 84948654 41 TACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACC TACCCAAGACCATTGACAACCATCGAGTGTATGATGAAACC < 41bp 0.760036141865135 0.426608556757257 0.18479714 0.04757905 prediction 0.52007228373027 Functional Loss - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84948634 chr1:84948636 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_62270 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:84948606-84948666
64251 chr12 66731874 66731874 1 + G T UCEC 66731871 + 66731851 66731891 41 TTTTCAAGCCCACCGATAATCAAGAAACTTAGTTTTATTTC TTTTCAAGCCCACCGATAATCAATAAACTTAGTTTTATTTC < 41bp 0.760031888108838 0.402429088421461 0.88102037 0.20497045 prediction 0.520063776217677 Functional Loss - HELB ENSG00000127311 CDS Human protein_coding chr12:66731871 chr12:66731874 stopgain 0.890 0 24 hm5C_associated_SNPs_62271 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:66731856-66731878
64251 chr7 150094613 150094613 1 + G T PAAD 150094611 + 150094591 150094631 41 ACTGTGGCCGCGGCTTCCGCCAGAAGCAGCACCTGCTCAAG ACTGTGGCCGCGGCTTCCGCCATAAGCAGCACCTGCTCAAG < 41bp 0.875226958666966 0.615201099767132 0.89536774 0.26928693 prediction 0.520051717799668 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150094611 chr7:150094613 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_62272 0 0 1 FXR2 POSTAR2 ENCODE chr7:150094532-150094621
64251 chr21 22746235 22746235 1 + A T LUSC 22746231 + 22746211 22746251 41 GGCAGCATGGAAGCTCATCACTGCATATTAAAGATGTGAAG GGCAGCATGGAAGCTCATCACTGCTTATTAAAGATGTGAAG < 41bp 0.760015408081581 0.4417562728815 0.27694726 0.09396094 prediction 0.520030816163162 Functional Loss - NCAM2 ENSG00000154654 CDS Human protein_coding chr21:22746231 chr21:22746235 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_62273 0 0 4 MTPAP POSTAR2 ENCODE chr21:22746185-22746316
64251 chr6 43413457 43413457 1 + G T HNSC 43413455 + 43413435 43413475 41 CAACATCCTCCTGGCCAACGCGGCAGGCCTGCTGGGGCTCC CAACATCCTCCTGGCCAACGCGTCAGGCCTGCTGGGGCTCC < 41bp 0.883023690421436 0.623010281869318 0.83347046 0.19057202 prediction 0.520026817104236 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43413455 chr6:43413457 nonsynonymous SNV 0.260 2 23 hm5C_associated_SNPs_62274 0 0 1 RPS3 POSTAR2 ENCODE chr6:43413420-43413534
64251 chr1 207297310 207297310 1 + G T GBM 207297307 + 207297287 207297327 41 CCACTAGTCGTTGTGAAGTCCAAGATAGAGGAGTTGGCTGG CCACTAGTCGTTGTGAAGTCCAATATAGAGGAGTTGGCTGG < 41bp 0.760006471350662 0.37279212372748 0.09452969 0.08353779 prediction 0.520012942701325 Functional Loss - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207297307 chr1:207297310 nonsynonymous SNV 0.437 3 24 hm5C_associated_SNPs_62278 0 0 2 SND1 POSTAR2 ENCODE chr1:207297282-207297350
64251 chr16 31120644 31120644 1 + G T BRCA 31120642 + 31120622 31120662 41 GCTCCGGGCCCGCTCGACGTCGGCCACCGACACACACCACG GCTCCGGGCCCGCTCGACGTCGTCCACCGACACACACCACG < 41bp 0.759981355118212 0.41410572060246 0.16588762 0.05439645 prediction 0.519962710236425 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31120642 chr16:31120644 nonsynonymous SNV 0.153 1 23 hm5C_associated_SNPs_62284 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:31120615-31120650
64251 chr19 17835951 17835951 1 + G T LUSC 17835949 + 17835929 17835969 41 GGGGGAGCTGCTGCTACAGACAGGGGGCTTCTCGCCTCACC GGGGGAGCTGCTGCTACAGACATGGGGCTTCTCGCCTCACC < 41bp 0.888675742346222 0.628699672131972 0.94842744 0.8664323 prediction 0.5199521404285 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17835949 chr19:17835951 nonsynonymous SNV 0.254 4 23 hm5C_associated_SNPs_62286 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17835935-17835962
64251 chr19 18778624 18778624 1 + G T GBM 18778621 + 18778601 18778641 41 TGCGTGCAGGACGTGCTGGGCGCGGCCGTGTTCTTGCAGAT TGCGTGCAGGACGTGCTGGGCGCTGCCGTGTTCTTGCAGAT < 41bp 0.759967475132183 0.368736114116716 0.32113728 0.28200543 prediction 0.519934950264366 Functional Loss - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18778621 chr19:18778624 synonymous SNV . 0 24 hm5C_associated_SNPs_62289 0 0 1 EWSR1 POSTAR2 SRX029343 chr19:18778622-18778641
64251 chr11 12225857 12225857 1 + G T UCEC 12225854 + 12225834 12225874 41 CTGCCATTGAACTTGCCTACCTGGGAGCCAAAGTGGTCGTG CTGCCATTGAACTTGCCTACCTGTGAGCCAAAGTGGTCGTG < 41bp 0.759965092395768 0.377064450539113 0.38810885 0.035642147 prediction 0.519930184791535 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12225854 chr11:12225857 stopgain 1.000 1 24 hm5C_associated_SNPs_62290 0 0 3 FXR2 POSTAR2 ENCODE chr11:12225805-12225898
64251 chr10 6262820 6262820 1 + G T LUAD 6262817 + 6262797 6262837 41 GCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGGTGCGGGGT GCGACTCAGGCCTGTCCAGCCGGTGCAAGAAGGTGCGGGGT < 41bp 0.909405323197598 0.64944249682269 0.9368105 0.91845953 prediction 0.519925652749816 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6262817 chr10:6262820 nonsynonymous SNV 0.971 5 24 hm5C_associated_SNPs_62292 0 0 1 PPIG POSTAR2 ENCODE chr10:6262758-6262824
64251 chr5 126887538 126887538 1 + A C COAD 126887534 + 126887514 126887554 41 CATTTACTGGGATGTCCCGTCGGCAGATGATCTACAGTGCA CATTTACTGGGATGTCCCGTCGGCCGATGATCTACAGTGCA < 41bp 0.857676514409185 0.597714316767885 0.36670798 0.34801638 prediction 0.5199243952826 Functional Loss - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126887534 chr5:126887538 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_62293 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:126887475-126887542
64251 chr11 32605475 32605475 1 + G T UCEC 32605473 + 32605453 32605493 41 TCGACATCAGTGAAGAAGATCAGGTGTGCTTCGGTCTACGG TCGACATCAGTGAAGAAGATCATGTGTGCTTCGGTCTACGG < 41bp 0.876564833883433 0.616623343341299 0.9024071 0.27810058 prediction 0.519882981084267 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32605473 chr11:32605475 nonsynonymous SNV 0.957 3 23 hm5C_associated_SNPs_62298 0 0 7 DDX3X POSTAR2 ENCODE chr11:32605464-32605476
64251 chr10 12291674 12291674 1 + C T BRCA 12291672 + 12291652 12291692 41 CCCAAGGACTTTGTAGACCTCTCTACTGGGGAGGACGCTCA CCCAAGGACTTTGTAGACCTCTTTACTGGGGAGGACGCTCA < 41bp 0.759933911153184 0.466457829142794 0.9134936 0.16930714 prediction 0.519867822306367 Functional Loss - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12291672 chr10:12291674 nonsynonymous SNV 0.423 4 23 hm5C_associated_SNPs_62300 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:12291622-12291708
64251 chr17 19286534 19286534 1 + A T LIHC 19286530 + 19286510 19286550 41 TGCTGGCTGACCTGCCTGACCTCCAGGACCCCTGAGGCCCC TGCTGGCTGACCTGCCTGACCTCCTGGACCCCTGAGGCCCC < 41bp 0.872519228112383 0.612590304951244 0.9001936 0.106360435 prediction 0.519857846322277 Functional Loss - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19286530 chr17:19286534 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_62304 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:19286493-19286558
64251 chr22 46704466 46704466 1 + C T LUSC 46704464 + 46704444 46704484 41 AGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAA AGCTGCCAAGCCTGAAGACCCTTGGAGCCAGGGCGTGGAAA < 41bp 0.769375612243653 0.509456251314401 0.3146721 0.18019024 prediction 0.519838721858504 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704464 chr22:46704466 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_62307 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:46704460-46704480
64251 chr2 74154148 74154148 1 + G T LUSC 74154145 + 74154125 74154165 41 AGAGGCCTGCACGCGGGGCGCGGGCCCCGAAGGCTCTCCAT AGAGGCCTGCACGCGGGGCGCGGTCCCCGAAGGCTCTCCAT < 41bp 0.910527896256905 0.650613269115836 0.9079871 0.85082734 prediction 0.519829254282138 Functional Loss - DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154145 chr2:74154148 synonymous SNV . 0 24 hm5C_associated_SNPs_62308 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr4 89649710 89649710 1 - T A COAD 89649714 - 89649694 89649734 41 CTCCTGGAGGTGCTCATCAGCAAGAGAGACACTGATTCCAA CTCCTGGAGGTGCTCATCAGCAAGTGAGACACTGATTCCAA < 41bp 0.75990417500726 0.475741697834242 0.77238095 0.86153543 prediction 0.51980835001452 Functional Loss - FAM13A ENSG00000138640 CDS Human protein_coding chr4:89649714 chr4:89649710 stopgain 0.895 1 25 hm5C_associated_SNPs_62312 0 0 2 UCHL5 POSTAR2 ENCODE chr4:89649663-89649757
64251 chr3 101540689 101540689 1 + G T LUAD 101540687 + 101540667 101540707 41 GGAGTATATCTCGTCGATGCCTGGGAGATGACCCTGGCCCA GGAGTATATCTCGTCGATGCCTTGGAGATGACCCTGGCCCA < 41bp 0.759892281354226 0.433618219608739 0.5484045 0.1624529 prediction 0.519784562708453 Functional Loss - NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101540687 chr3:101540689 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62316 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831619 chr3:101540680-101540700
64251 chr19 17972963 17972963 1 + C T UCEC 17972961 + 17972941 17972981 41 GATCTGGCTGCGCTATGACTCCCGGAGCGGCACCCACAACA GATCTGGCTGCGCTATGACTCCTGGAGCGGCACCCACAACA < 41bp 0.763403006724958 0.503519022521372 0.1087293 0.109375566 prediction 0.519767968407172 Functional Loss - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17972961 chr19:17972963 nonsynonymous SNV 0.907 3 23 hm5C_associated_SNPs_62317 0 0 1 YBX3 POSTAR2 ENCODE chr19:17972942-17972970
64251 chr3 111697922 111697922 1 + G C rs61736214 111697921 + 111697901 111697941 41 CTACGAAGATGGCGGTTGCGCGCTTGGCAGCTGTGGCGGCC CTACGAAGATGGCGGTTGCGCCCTTGGCAGCTGTGGCGGCC < 41bp 0.829115593871092 0.569252849799108 0.058270723 0.036566168 prediction 0.519725488143968 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111697921 chr3:111697922 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_62324 0 0 5 DDX3X POSTAR2 ENCODE chr3:111697877-111697994
64251 chr20 30193954 30193954 1 + G C rs8116155 30193953 + 30193933 30193973 41 CCAGGGGGCAAGAGGAATTACGTGCTCTGTGGGTCTCCCCC CCAGGGGGCAAGAGGAATTACCTGCTCTGTGGGTCTCCCCC < 41bp 0.759858519537473 0.488936136852185 0.30447054 0.23767367 prediction 0.519717039074947 Functional Loss - ID1 ENSG00000125968 UTR3 Human protein_coding chr20:30193953 chr20:30193954 . . 0 22 hm5C_associated_SNPs_62326 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr20:30193920-30193960
64251 chr20 3802911 3802911 1 + C T LUAD 3802909 + 3802889 3802929 41 GTGCCGAGAGGGACAGGCTTCTCCGGAAGGAACAGATTTTA GTGCCGAGAGGGACAGGCTTCTTCGGAAGGAACAGATTTTA < 41bp 0.759853834346151 0.479575042979943 0.41090554 0.42789286 prediction 0.519707668692302 Functional Loss - AP5S1 ENSG00000125843 CDS Human protein_coding chr20:3802909 chr20:3802911 synonymous SNV . 0 23 hm5C_associated_SNPs_62328 0 0 3 GRWD1 POSTAR2 ENCODE chr20:3802789-3802933
64251 chr1 181058479 181058479 1 + G C HNSC 181058478 + 181058458 181058498 41 CTGGAGCCGCGTGGAGGGGCCGCGCCAGGCGGCGGCCAGAG CTGGAGCCGCGTGGAGGGGCCCCGCCAGGCGGCGGCCAGAG < 41bp 0.828788947050269 0.568940924351635 0.36932623 0.28494275 prediction 0.519696045397268 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058478 chr1:181058479 synonymous SNV . 0 22 hm5C_associated_SNPs_62329 0 0 2 RBM15 POSTAR2 ENCODE chr1:181058447-181058496
64251 chr2 29150518 29150518 1 + T C LAML 29150517 + 29150497 29150537 41 TGCAGCTATCAAGCCCGCTCCTCCACAAACCGAGCAAGTAG TGCAGCTATCAAGCCCGCTCCCCCACAAACCGAGCAAGTAG < 41bp 0.787364801587689 0.52752924738857 0.941259 0.03227982 prediction 0.519671108398238 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29150517 chr2:29150518 synonymous SNV . 0 22 hm5C_associated_SNPs_62330 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:29150501-29150528
64251 chr18 48500829 48500829 1 + C T OV 48500827 + 48500807 48500847 41 TGCAGCATACCCATCTCCAACCCGGGGTGCCTCTGCTGTGG TGCAGCATACCCATCTCCAACCTGGGGTGCCTCTGCTGTGG < 41bp 0.759834331317935 0.496587601537916 0.94544005 0.9445743 prediction 0.51966866263587 Functional Loss - ELAC1 ENSG00000141642;ENSG00000267699 CDS Human other chr18:48500827 chr18:48500829 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62331 0 0 1 DDX3X POSTAR2 ENCODE chr18:48500772-48500882
64251 chr11 118452014 118452014 1 + A T UCEC 118452010 + 118451990 118452030 41 AGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATGA AGCAGGAAAGGCTATTGTTTCTCGTCAGTTTGTGGAAATGA < 41bp 0.869952653464412 0.610132729375669 0.079740256 0.026432127 prediction 0.519639848177486 Functional Loss - ARCN1 ENSG00000095139 CDS Human protein_coding chr11:118452010 chr11:118452014 synonymous SNV . 0 25 hm5C_associated_SNPs_62334 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118451970-118452060
64251 chr1 232144620 232144620 1 + G T STAD 232144618 + 232144598 232144638 41 AGCCTACAGCTCCAGGAAGCCAGGGGAAGCCTGTCTGTAGA AGCCTACAGCTCCAGGAAGCCATGGGAAGCCTGTCTGTAGA < 41bp 0.759815974862429 0.450472623549349 0.91037405 0.3437463 prediction 0.519631949724859 Functional Loss - DISC1 ENSG00000162946 CDS Human protein_coding chr1:232144618 chr1:232144620 nonsynonymous SNV 0.062 1 23 hm5C_associated_SNPs_62335 0 0 1 GRWD1 POSTAR2 ENCODE chr1:232144567-232144817
64251 chr2 102476325 102476325 1 + A T LUAD 102476321 + 102476301 102476341 41 ACGAGCCTGCTGACCGAGCGCGAGAGGTATCCTCTTTCCTT ACGAGCCTGCTGACCGAGCGCGAGTGGTATCCTCTTTCCTT < 41bp 0.759815129729037 0.470579074522893 0.87002075 0.29531193 prediction 0.519630259458075 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102476321 chr2:102476325 nonsynonymous SNV 0.838 3 25 hm5C_associated_SNPs_62336 0 0 4 GRWD1 POSTAR2 ENCODE chr2:102476291-102476325
64251 chr2 97017715 97017715 1 + C T SKCM 97017713 + 97017693 97017733 41 CTCTCTCCACGGGAGAACCTCTCGAGTTGCCAGAGTTAGGT CTCTCTCCACGGGAGAACCTCTTGAGTTGCCAGAGTTAGGT < 41bp 0.823250198998752 0.563438178653196 0.6165887 0.059800416 prediction 0.519624040691113 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97017713 chr2:97017715 synonymous SNV . 0 23 hm5C_associated_SNPs_62338 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:97017673-97017724
64251 chr9 6413371 6413371 1 + G C rs540520681 6413370 + 6413350 6413390 41 CGTCCGGTCGGTCCGGTGGGCGCGCTCGCCCGCCTGCCGCT CGTCCGGTCGGTCCGGTGGGCCCGCTCGCCCGCCTGCCGCT < 41bp 0.791519797480726 0.531709557526559 0.7437441 0.09070781 prediction 0.519620479908334 Functional Loss - UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413370 chr9:6413371 . . 0 22 hm5C_associated_SNPs_62339 0 0 7 DDX3X POSTAR2 ENCODE chr9:6413242-6413371
64251 chr22 41918884 41918884 1 + G T HNSC 41918882 + 41918862 41918902 41 CTATGAAGATATGGGGCGCTCAGCAGCTGTGGCCAAGCAGG CTATGAAGATATGGGGCGCTCATCAGCTGTGGCCAAGCAGG < 41bp 0.883127123464728 0.623328821703115 0.54611236 0.05954215 prediction 0.519596603523227 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41918882 chr22:41918884 nonsynonymous SNV 0.983 5 23 hm5C_associated_SNPs_62343 0 0 1 UCHL5 POSTAR2 ENCODE chr22:41918834-41918885
64251 chr17 38349977 38349977 1 + G T LGG 38349975 + 38349955 38349995 41 AGGCCTATGTGCGCCAGTTTCAGGTCATCGACAACCAGAAC AGGCCTATGTGCGCCAGTTTCATGTCATCGACAACCAGAAC < 41bp 0.7597851856069 0.429257557562121 0.85281086 0.060887516 prediction 0.519570371213799 Functional Loss - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38349975 chr17:38349977 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_62346 0 0 1 BUD13 POSTAR2 ENCODE chr17:38349899-38349979
64251 chr12 112888149 112888149 1 + G T UCEC 112888146 + 112888126 112888166 41 AATGGAGCTGTCACCCACATCAAGATTCAGAACACTGGTGA AATGGAGCTGTCACCCACATCAATATTCAGAACACTGGTGA < 41bp 0.7597778858772 0.38060442989002 0.15339261 0.122713655 prediction 0.519555771754399 Functional Loss - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112888146 chr12:112888149 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_62349 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112888124-112888171
64251 chr22 21141179 21141179 1 + C T rs5904 21141177 + 21141157 21141197 41 AAACAGTTCAAGCACCAAGGCACGATCACAGTGAACGAGGA AAACAGTTCAAGCACCAAGGCATGATCACAGTGAACGAGGA < 41bp 0.784636516686545 0.524862610339437 0.02364391 0.026086897 prediction 0.519547812694217 Functional Loss - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21141177 chr22:21141179 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_62350 0 0 4 NOL12 POSTAR2 ENCODE chr22:21141160-21141196
64251 chr3 56647651 56647651 1 + G T UCEC 56647649 + 56647629 56647669 41 GCCCAGGTAGAAGAGAAGCGCAGGAAGAAACAACTGGAGGA GCCCAGGTAGAAGAGAAGCGCATGAAGAAACAACTGGAGGA < 41bp 0.861525241909386 0.601788233228651 0.8412328 0.35783693 prediction 0.51947401736147 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647649 chr3:56647651 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_62355 0 0 3 TRA2A POSTAR2 ENCODE chr3:56647619-56647677
64251 chr19 49376947 49376947 1 + G T LGG 49376944 + 49376924 49376964 41 GCCTTCTGATAAGGACACTGCAAGGTTCTGATAAGAACCCA GCCTTCTGATAAGGACACTGCAATGTTCTGATAAGAACCCA < 41bp 0.759729854632347 0.357927910480471 0.3338643 0.18984106 prediction 0.519459709264694 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376944 chr19:49376947 nonsynonymous SNV 0.189 2 24 hm5C_associated_SNPs_62358 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49376917-49376947
64251 chr8 26441374 26441374 1 + G T LUAD 26441371 + 26441351 26441391 41 GAAGACCATCGAGGCCCACTCCCGGATGGTGATCCCCGGAG GAAGACCATCGAGGCCCACTCCCTGATGGTGATCCCCGGAG < 41bp 0.759715490250266 0.356902359340465 0.38718075 0.24602082 prediction 0.519430980500533 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26441371 chr8:26441374 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_62361 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:26441354-26441378
64251 chr19 3532599 3532599 1 + C T LUAD 3532597 + 3532577 3532617 41 CAACCACTGCAGTGTATCGACACGGGCTCCCAAGTGTGCAA CAACCACTGCAGTGTATCGACATGGGCTCCCAAGTGTGCAA < 41bp 0.759694314448723 0.497516432864358 0.47090507 0.4348221 prediction 0.519388628897447 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3532597 chr19:3532599 nonsynonymous SNV 0.949 4 23 hm5C_associated_SNPs_62364 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:3532565-3532603
64251 chr6 26158602 26158602 1 + G C HNSC 26158601 + 26158581 26158621 41 ATCATGAATTCCTTCGTCAACGACATCTTCGAGCGCATCGC ATCATGAATTCCTTCGTCAACCACATCTTCGAGCGCATCGC < 41bp 0.838233345229008 0.5785513310195 0.17385706 0.14546463 prediction 0.519364028419017 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158601 chr6:26158602 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_62368 0 0 38 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158340-26158620
64251 chr6 26104332 26104332 1 + G C UCEC 26104328 + 26104308 26104348 41 AAGCGCATTTCCGGTCTTATCTATGAGGAGACTCGAGGTGT AAGCGCATTTCCGGTCTTATCTATCAGGAGACTCGAGGTGT < 41bp 0.780142113794688 0.520463636779353 0.4523181 0.0734562 prediction 0.51935695403067 Functional Loss - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104328 chr6:26104332 nonsynonymous SNV 0.531 2 25 hm5C_associated_SNPs_62369 0 0 64 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:26104160-26104340
64251 chr2 157435456 157435456 1 + G T UCEC 157435453 + 157435433 157435473 41 TTATGAAATGGGCTATAAATCTCGATCAGAACAGTTAACAG TTATGAAATGGGCTATAAATCTCTATCAGAACAGTTAACAG < 41bp 0.888771591481147 0.629094367219182 0.3795318 0.82686555 prediction 0.519354448523931 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157435453 chr2:157435456 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_62371 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157435436-157435464
64251 chr19 10568620 10568620 1 + C T UCEC 10568618 + 10568598 10568638 41 ACGAGAAAAACAGCAAGCGCCGCGACCAAGACCCTCCCAGC ACGAGAAAAACAGCAAGCGCCGTGACCAAGACCCTCCCAGC < 41bp 0.759675299827592 0.494460460751907 0.3799219 0.31720334 prediction 0.519350599655183 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10568618 chr19:10568620 stopgain 0.005 0 23 hm5C_associated_SNPs_62372 0 0 2 DDX24 POSTAR2 ENCODE chr19:10568562-10568681
64251 chrX 154327609 154327609 1 + G T UCEC 154327606 + 154327586 154327626 41 TAAGGTCCCTTCATGGTCCACGAGACTTCTGGAGCTCCAGC TAAGGTCCCTTCATGGTCCACGATACTTCTGGAGCTCCAGC < 41bp 0.759671868792499 0.373898152063221 0.29849464 0.08822465 prediction 0.519343737584998 Functional Loss - BRCC3 ENSG00000185515 CDS Human protein_coding chrX:154327606 chrX:154327609 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_62373 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:154327586-154327630
64251 chr14 21961059 21961059 1 + A T UCEC 21961055 + 21961035 21961075 41 TCGGTCAGTGTTGCAGGCAGCAGCAGCTGCTGCTGCTGCTG TCGGTCAGTGTTGCAGGCAGCAGCTGCTGCTGCTGCTGCTG < 41bp 0.860274631134496 0.600617801065811 0.7810828 0.75328285 prediction 0.51931366013737 Functional Loss - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961055 chr14:21961059 synonymous SNV . 0 25 hm5C_associated_SNPs_62376 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:21961035-21961062
64251 chr6 4032609 4032609 1 + C T COAD 4032607 + 4032587 4032627 41 TTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCC TTATAAATGAAAGTAGAAGTCGTGATCGAGGTAAAAAATCC < 41bp 0.759649564497448 0.491063585023504 0.023035794 0.01167652 prediction 0.519299128994895 Functional Loss - PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4032607 chr6:4032609 synonymous SNV . 0 23 hm5C_associated_SNPs_62379 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:4032587-4032617
64251 chr15 43476511 43476511 1 + G T SARC 43476509 + 43476489 43476529 41 ACATGTGTTGGAGCTTGCTGCAGCGGTGCTTTGGTCACAAC ACATGTGTTGGAGCTTGCTGCATCGGTGCTTTGGTCACAAC < 41bp 0.759649415769352 0.430572362707316 0.44534975 0.12375489 prediction 0.519298831538704 Functional Loss - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476509 chr15:43476511 nonsynonymous SNV 0.992 0 23 hm5C_associated_SNPs_62380 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr15:43476488-43476521
64251 chr10 85909883 85909883 1 + C T UCEC 85909881 + 85909861 85909901 41 CTCATCAGAGCTGCATGGTACACAGCTGGCATTGTGGGAGG CTCATCAGAGCTGCATGGTACATAGCTGGCATTGTGGGAGG < 41bp 0.759646560686842 0.491318618861472 0.28579655 0.32676572 prediction 0.519293121373684 Functional Loss - GHITM ENSG00000165678 CDS Human protein_coding chr10:85909881 chr10:85909883 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_62382 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:85909811-85909933
64251 chr18 213590 213590 1 + A C rs569763732 213586 + 213566 213606 41 ACTCACACCGAGGCCATCATCTCAACATTAGAGTTGTGCTA ACTCACACCGAGGCCATCATCTCACCATTAGAGTTGTGCTA < 41bp 0.759641613338744 0.423147518548131 0.27651387 0.22718453 prediction 0.519283226677489 Functional Loss - USP14 ENSG00000101557 UTR3 Human protein_coding chr18:213586 chr18:213590 . . 0 25 hm5C_associated_SNPs_62384 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:213531-213641
64251 chr19 39207810 39207810 1 + G T LUSC 39207807 + 39207787 39207827 41 TCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTAC TCCAGGAGATGCAGCAGAAGCTGTAGGACTTCCGCGACTAC < 41bp 0.913360675918304 0.653720466590072 0.89646655 0.39793718 prediction 0.519280418656463 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39207807 chr19:39207810 stopgain 1.000 1 24 hm5C_associated_SNPs_62386 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39207778-39207824
64251 chr13 113977050 113977050 1 + G C rs9577506 113977046 + 113977026 113977066 41 TCTCTGAGGGGTGGGGGTGCCGCTGTCTCTGAGGGGTGGGG TCTCTGAGGGGTGGGGGTGCCGCTCTCTCTGAGGGGTGGGG < 41bp 0.772338392232325 0.512701426945442 0.427823 0.41972047 prediction 0.519273930573767 Functional Loss - LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113977046 chr13:113977050 . . 0 25 hm5C_associated_SNPs_62387 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:113976971-113977052
64251 chr16 72143406 72143406 1 + G C rs111734496 72143402 + 72143382 72143422 41 CGTGAAACAGGCGGGCAAGTCACGGCAGGTGAGGATTCTGT CGTGAAACAGGCGGGCAAGTCACGCCAGGTGAGGATTCTGT < 41bp 0.791918489724074 0.532294654019409 0.7650378 0.7393916 prediction 0.519247671409331 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72143402 chr16:72143406 synonymous SNV . 0 25 hm5C_associated_SNPs_62390 0 0 3 EIF3H POSTAR2 ENCODE chr16:72143378-72143410
64251 chr4 134073285 134073285 1 + G T HNSC 134073282 + 134073262 134073302 41 TGGTGATCGAGGTGCGCGACCATGGGCAGCCGCCCCTTTCC TGGTGATCGAGGTGCGCGACCATTGGCAGCCGCCCCTTTCC < 41bp 0.7596142796575 0.356241509219499 0.8339674 0.13794026 prediction 0.519228559315001 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073282 chr4:134073285 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62393 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:134073282-134073324
64251 chr19 50148305 50148305 1 + C T SKCM 50148303 + 50148283 50148323 41 CATGGAGGAAGAAGATGAGTCTCGAGGGAAGACAGAGGAGT CATGGAGGAAGAAGATGAGTCTTGAGGGAAGACAGAGGAGT < 41bp 0.774118822681886 0.514542671453589 0.5061849 0.46131685 prediction 0.519152302456594 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50148303 chr19:50148305 stopgain 1.000 0 23 hm5C_associated_SNPs_62396 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:50148280-50148320
64251 chr14 45432037 45432037 1 + G C LUAD 45432036 + 45432016 45432056 41 GACGCAAGGAAGCTTTGTATCGGGCACTGGGCCGAGTGCTT GACGCAAGGAAGCTTTGTATCCGGCACTGGGCCGAGTGCTT < 41bp 0.759553573672868 0.46039938412571 0.9046927 0.72368175 prediction 0.519107147345736 Functional Loss - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45432036 chr14:45432037 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_62399 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:45432032-45432057
64251 chr15 39874629 39874629 1 + G T LUSC 39874626 + 39874606 39874646 41 CTGAGGCAGATGAAGAAGACCCGGGGCACGCTGCTGGCCCT CTGAGGCAGATGAAGAAGACCCGTGGCACGCTGCTGGCCCT < 41bp 0.759552820443049 0.355391326967602 0.9353176 0.5630086 prediction 0.519105640886098 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874626 chr15:39874629 synonymous SNV . 0 24 hm5C_associated_SNPs_62400 0 0 6 DDX6 POSTAR2 ENCODE chr15:39874619-39874660
64251 chr17 30362634 30362634 1 + C T STAD 30362632 + 30362612 30362652 41 ACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGA ACAACACTTAAGAACATTCTCATGATGACTGTTGAACTGGA < 41bp 0.759527168603174 0.482240499165597 0.1897105 0.3080586 prediction 0.519054337206349 Functional Loss - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30362632 chr17:30362634 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_62404 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:30362626-30362648
64251 chr6 42985916 42985916 1 + G T OV 42985913 + 42985893 42985933 41 TTTCCAATGACATTCACAAGCTAGATACCAGCACCATGACA TTTCCAATGACATTCACAAGCTATATACCAGCACCATGACA < 41bp 0.759488461624197 0.371507065710575 0.13412902 0.19235477 prediction 0.518976923248395 Functional Loss - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985913 chr6:42985916 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62409 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42985880-42985938
64251 chr8 11660287 11660287 1 + G C rs548656634 11660286 + 11660266 11660306 41 AGGTCCAGCCGGCCGGTGAGCGCCTGGGGACCGCAGAGGTG AGGTCCAGCCGGCCGGTGAGCCCCTGGGGACCGCAGAGGTG < 41bp 0.776798610069683 0.517317524297722 0.6554638 0.27027187 prediction 0.518962171543921 Functional Loss - FDFT1 ENSG00000079459 UTR5 Human protein_coding chr8:11660286 chr8:11660287 . . 0 22 hm5C_associated_SNPs_62411 0 0 9 DDX3X POSTAR2 ENCODE chr8:11660272-11660364
64251 chr11 63978862 63978862 1 + C T BLCA 63978860 + 63978840 63978880 41 CGCCACCCGACCCCCTCCTGCTCCAGCGTCTGCCACGGCCC CGCCACCCGACCCCCTCCTGCTTCAGCGTCTGCCACGGCCC < 41bp 0.808713042894793 0.54923262990469 0.55826616 0.14979535 prediction 0.518960825980205 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63978860 chr11:63978862 synonymous SNV . 0 23 hm5C_associated_SNPs_62412 0 0 1 SERBP1 POSTAR2 ENCODE chr11:63978816-63978871
64251 chr8 9588516 9588516 1 + C T UCEC 9588514 + 9588494 9588534 41 TTGTAGAGTACCTGCTACACCACGGTGCCGATGTCCATGCC TTGTAGAGTACCTGCTACACCATGGTGCCGATGTCCATGCC < 41bp 0.759473566781698 0.48884329689282 0.31933898 0.27052915 prediction 0.518947133563395 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9588514 chr8:9588516 synonymous SNV . 0 23 hm5C_associated_SNPs_62413 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr8:9588507-9588523
64251 chr4 128565128 128565128 1 + G T SKCM 128565126 + 128565106 128565146 41 AAGTGGAGCTGGAGAAGAACCGGAAAGCAGGGTGATGGAGA AAGTGGAGCTGGAGAAGAACCGTAAAGCAGGGTGATGGAGA < 41bp 0.873716463740597 0.614243599836608 0.8681313 0.28336442 prediction 0.518945727807977 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128565126 chr4:128565128 nonsynonymous SNV 0.062 0 23 hm5C_associated_SNPs_62414 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:128565102-128565129
64251 chr17 1657746 1657746 1 + G C LUSC 1657745 + 1657725 1657765 41 AGAGCCTGAAAGGCTTCCCCCGCGGAGACAAGCTTTTCGGC AGAGCCTGAAAGGCTTCCCCCCCGGAGACAAGCTTTTCGGC < 41bp 0.759463638477551 0.44574321079221 0.78255624 0.29102868 prediction 0.518927276955102 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657745 chr17:1657746 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_62415 0 0 2 SND1 POSTAR2 ENCODE chr17:1657714-1657755
64251 chr7 90896140 90896140 1 + G C rs534296694 90896136 + 90896116 90896156 41 AAACAAGGGGAGACTACAGTCTGAGACCCGGGGCTCAGCCC AAACAAGGGGAGACTACAGTCTGACACCCGGGGCTCAGCCC < 41bp 0.759461469254645 0.48002361772167 0.8611827 0.19366524 prediction 0.51892293850929 Functional Loss - FZD1 ENSG00000157240 UTR3 Human protein_coding chr7:90896136 chr7:90896140 . . 0 25 hm5C_associated_SNPs_62416 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:90896091-90896158
64251 chr7 73609171 73609171 1 + C T CESC 73609169 + 73609149 73609189 41 GCTTCAGAGATGGCCCTCCCCTCCGTGGATCCAACATGGAT GCTTCAGAGATGGCCCTCCCCTTCGTGGATCCAACATGGAT < 41bp 0.802612579859009 0.543165918298871 0.14750695 0.08873588 prediction 0.518893323120277 Functional Loss - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609169 chr7:73609171 synonymous SNV . 0 23 hm5C_associated_SNPs_62418 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:73609131-73609173
64251 chr19 14580606 14580606 1 + C T LUSC 14580604 + 14580584 14580624 41 TGCTGGGCCTACAGTTTCTTCACGAACACAAGATCGTCTAC TGCTGGGCCTACAGTTTCTTCATGAACACAAGATCGTCTAC < 41bp 0.792751802199271 0.533324810570873 0.07614043 0.058395654 prediction 0.518853983256795 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580604 chr19:14580606 synonymous SNV . 0 23 hm5C_associated_SNPs_62420 0 0 2 METAP2 POSTAR2 ENCODE chr19:14580570-14580610
64251 chr14 76452154 76452154 1 + G C ACC 76452153 + 76452133 76452173 41 GAGGATTTGCTCGACTTGGACGAGGAGCTTCGCTACAGCTT GAGGATTTGCTCGACTTGGACCAGGAGCTTCGCTACAGCTT < 41bp 0.759421824164982 0.452485301445797 0.76655316 0.2896101 prediction 0.518843648329963 Functional Loss - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76452153 chr14:76452154 nonsynonymous SNV 0.085 2 22 hm5C_associated_SNPs_62421 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:76452144-76452177
64251 chr20 32379198 32379198 1 + G T PRAD 32379196 + 32379176 32379216 41 TGGTGCGGTGGGCGCGGAAACTGAGCTGGTGGTACCTGGAC TGGTGCGGTGGGCGCGGAAACTTAGCTGGTGGTACCTGGAC < 41bp 0.874548337851624 0.615128751697498 0.8436059 0.76360947 prediction 0.518839172308251 Functional Loss - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32379196 chr20:32379198 stopgain 0.188 0 23 hm5C_associated_SNPs_62424 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:32379191-32379218
64251 chr16 31087727 31087727 1 + G T UCEC 31087724 + 31087704 31087744 41 TCCCAGAGCTCTCTCGGCACCGAGAACTGCTCCATCCATCT TCCCAGAGCTCTCTCGGCACCGATAACTGCTCCATCCATCT < 41bp 0.759404988631057 0.375529038999713 0.05810806 0.0017587543 prediction 0.518809977262115 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31087724 chr16:31087727 stopgain 0.997 0 24 hm5C_associated_SNPs_62429 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:31087720-31087752
64251 chr6 139100986 139100986 1 + G T LUAD 139100984 + 139100964 139101004 41 TGAAAGAAAAGACCAAACCTCAGGGTGGAGAGGGCAAAGGC TGAAAGAAAAGACCAAACCTCATGGTGGAGAGGGCAAAGGC < 41bp 0.877332896458791 0.617935051060665 0.915931 0.15620685 prediction 0.518795690796251 Functional Loss - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139100984 chr6:139100986 nonsynonymous SNV 0.781 0 23 hm5C_associated_SNPs_62431 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:139100969-139100993
64251 chr13 37394092 37394092 1 + G T OV 37394089 + 37394069 37394109 41 GCAGCGCGGGAAACGTCAAACTCGAGGTATCAGACTTAGCT GCAGCGCGGGAAACGTCAAACTCTAGGTATCAGACTTAGCT < 41bp 0.893423539081957 0.634027221862037 0.5305466 0.45201808 prediction 0.518792634439839 Functional Loss - RFXAP ENSG00000133111 CDS Human protein_coding chr13:37394089 chr13:37394092 stopgain 0.978 1 24 hm5C_associated_SNPs_62432 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:37394078-37394105
64251 chr1 155837977 155837977 1 + G T SKCM 155837975 + 155837955 155837995 41 GCGGAGAGACAAAGATGGTCCTGGGAGGGAAGGTGGACGTA GCGGAGAGACAAAGATGGTCCTTGGAGGGAAGGTGGACGTA < 41bp 0.869656153737551 0.610291869062763 0.41562808 0.18401518 prediction 0.518728569349576 Functional Loss - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155837975 chr1:155837977 nonsynonymous SNV 0.975 1 23 hm5C_associated_SNPs_62447 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:155837960-155838000
64251 chr6 16143302 16143302 1 + A C GBM 16143298 + 16143278 16143318 41 GGGGACCAGCCAGGCTTCAGCTGAATACCAAGTTTTGCAGA GGGGACCAGCCAGGCTTCAGCTGACTACCAAGTTTTGCAGA < 41bp 0.759355276194349 0.34111379666582 0.4416155 0.42621163 prediction 0.518710552388699 Functional Loss - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16143298 chr6:16143302 nonsynonymous SNV 0.980 4 25 hm5C_associated_SNPs_62450 0 0 3 GPKOW POSTAR2 ENCODE chr6:16143231-16143313
64251 chr14 76905865 76905865 1 + G T LUAD 76905862 + 76905842 76905882 41 TGGGCACCCACGCCAACGGTCTGGACTCGCCACCCATGTTT TGGGCACCCACGCCAACGGTCTGTACTCGCCACCCATGTTT < 41bp 0.909504206575546 0.650152374316864 0.2506599 0.032012224 prediction 0.518703664517365 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76905862 chr14:76905865 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_62451 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr14:76905856-76905876
64251 chr20 19870272 19870272 1 + C T UCEC 19870270 + 19870250 19870290 41 CAGCTTGGACCATGGGCGCCCGCGGTCTGGACAAGCGAGGA CAGCTTGGACCATGGGCGCCCGTGGTCTGGACAAGCGAGGA < 41bp 0.773602368987937 0.514251516455167 0.18469322 0.21196797 prediction 0.518701705065541 Functional Loss - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19870270 chr20:19870272 synonymous SNV . 0 23 hm5C_associated_SNPs_62452 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:19870257-19870425
64251 chrX 48386768 48386768 1 + G T GBM 48386765 + 48386745 48386785 41 TGCTGCCTGGAGTCCTTGTGCTTGATGCTGTGAAGCACCTC TGCTGCCTGGAGTCCTTGTGCTTTATGCTGTGAAGCACCTC < 41bp 0.759297971413699 0.372192137905644 0.1599155 0.3209235 prediction 0.518595942827399 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48386765 chrX:48386768 nonsynonymous SNV 0.089 4 24 hm5C_associated_SNPs_62460 0 0 22 TARDBP POSTAR2 DRA001158,DRS012385 chrX:48386725-48386769
64251 chr6 42797515 42797515 1 + G T LUAD 42797513 + 42797493 42797533 41 TGGGCAGACATTTGCTGCCTCTGGAAGTCCAGTGATAGCCA TGGGCAGACATTTGCTGCCTCTTGAAGTCCAGTGATAGCCA < 41bp 0.759279953809156 0.428377252623477 0.30590737 0.24203992 prediction 0.518559907618312 Functional Loss - BICRAL ENSG00000112624 CDS Human protein_coding chr6:42797513 chr6:42797515 stopgain 1.000 1 23 hm5C_associated_SNPs_62464 0 0 1 RBM15 POSTAR2 ENCODE chr6:42797499-42797547
64251 chr19 39395717 39395717 1 + C T CESC 39395715 + 39395695 39395735 41 CTGGATTTTCTTCTAGGCTTCTCGGCCGGCACTGAGTACAT CTGGATTTTCTTCTAGGCTTCTTGGCCGGCACTGAGTACAT < 41bp 0.759276158190116 0.488505150922027 0.1974369 0.12405753 prediction 0.518552316380231 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395715 chr19:39395717 nonsynonymous SNV 0.437 0 23 hm5C_associated_SNPs_62466 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39395677-39395739
64251 chr1 224345363 224345363 1 + A T LIHC 224345359 + 224345339 224345379 41 GAAATTCCTCAGGGTCCGGGCAGAATGAGGAGTCTCCTCGG GAAATTCCTCAGGGTCCGGGCAGATTGAGGAGTCTCCTCGG < 41bp 0.759272844806268 0.465608503783857 0.89732504 0.8929008 prediction 0.518545689612536 Functional Loss - FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224345359 chr1:224345363 nonsynonymous SNV 0.929 0 25 hm5C_associated_SNPs_62467 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:224345320-224345365
64251 chr9 133488373 133488373 1 + G T LUSC 133488370 + 133488350 133488390 41 CAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAATCTG CAGGGGAGGTGAGCAGATTTCACTGATTCAAGCAGAATCTG < 41bp 0.909085012521232 0.649815260131658 0.8129134 0.4542043 prediction 0.518539504779148 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133488370 chr9:133488373 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62468 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:133488344-133488378
64251 chr16 67644819 67644819 1 + C T SKCM 67644817 + 67644797 67644837 41 AGAGAAAGACTTACCAGAGACGCCGGGAAGGGGGCCAGGAA AGAGAAAGACTTACCAGAGACGTCGGGAAGGGGGCCAGGAA < 41bp 0.759233792528998 0.486862690180658 0.3436951 0.3871448 prediction 0.518467585057995 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67644817 chr16:67644819 synonymous SNV . 0 23 hm5C_associated_SNPs_62474 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:67644780-67644820
64251 chr16 28993318 28993318 1 + C T STAD 28993316 + 28993296 28993336 41 CGGCATTCCTGCTGCGTTCCCGCGTGGTCCTTGGGGAGACC CGGCATTCCTGCTGCGTTCCCGTGTGGTCCTTGGGGAGACC < 41bp 0.759720034025159 0.500487589435587 0.65736836 0.38164586 prediction 0.518464889179143 Functional Loss - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28993316 chr16:28993318 synonymous SNV . 0 23 hm5C_associated_SNPs_62475 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:28993299-28993321
64251 chr17 1945928 1945928 1 + G T UCEC 1945925 + 1945905 1945945 41 GCCCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCAGAG GCCCTCCGGAGGAGCAGCCTCGATGCTGGTGGTTTTCAGAG < 41bp 0.909936868397129 0.650747590106216 0.9338734 0.89330316 prediction 0.518378556581825 Functional Loss - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1945925 chr17:1945928 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_62486 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:1945920-1945940
64251 chr17 58013600 58013600 1 + C T STAD 58013598 + 58013578 58013618 41 GCTGAAAAGAAATGCTGCTTCTCGTCTGGGAGCTGGTCCTG GCTGAAAAGAAATGCTGCTTCTTGTCTGGGAGCTGGTCCTG < 41bp 0.809337188506184 0.55016785503165 0.13938627 0.09387964 prediction 0.518338666949067 Functional Loss - RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58013598 chr17:58013600 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62490 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:58013584-58013618
64251 chr12 52369077 52369077 1 + C T UCEC 52369075 + 52369055 52369095 41 TGTGTGCGTGCACCAGCTGCCTCCAGGCCAACTACACGTGT TGTGTGCGTGCACCAGCTGCCTTCAGGCCAACTACACGTGT < 41bp 0.821784389312863 0.562627859008029 0.934384 0.5253122 prediction 0.518313060609668 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52369075 chr12:52369077 synonymous SNV . 0 23 hm5C_associated_SNPs_62492 0 0 2 DDX3X POSTAR2 ENCODE chr12:52369048-52369081
64251 chr6 83075627 83075627 1 + G T LUAD 83075624 + 83075604 83075644 41 TCAAGGAAACAGAGGTAGTGCAGGGCAAAGACCGGCTCACC TCAAGGAAACAGAGGTAGTGCAGTGCAAAGACCGGCTCACC < 41bp 0.759147103472962 0.373444736867111 0.85476303 0.3362517 prediction 0.518294206945924 Functional Loss - TPBG ENSG00000146242 CDS Human protein_coding chr6:83075624 chr6:83075627 nonsynonymous SNV 0.540 2 24 hm5C_associated_SNPs_62493 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:83075609-83075632
64251 chr2 139316692 139316692 1 + G T SKCM 139316690 + 139316670 139316710 41 GCAGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTAC GCAGAAGATTTAGGTAATCTCTTGGAAAACACAAGATTTAC < 41bp 0.856785443318367 0.597641538409852 0.35897046 0.18471637 prediction 0.518287809817029 Functional Loss - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139316690 chr2:139316692 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_62494 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:139316672-139316696
64251 chr6 2766390 2766390 1 + G C rs191526119 2766389 + 2766369 2766409 41 CGGCGATGGCGACGGGGACGCGGACGCGGACGGCGAGGACG CGGCGATGGCGACGGGGACGCCGACGCGGACGGCGAGGACG < 41bp 0.759142851387528 0.45984148223688 0.9106321 0.897329 prediction 0.518285702775055 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2766389 chr6:2766390 synonymous SNV . 0 22 hm5C_associated_SNPs_62495 0 0 2 FXR2 POSTAR2 ENCODE chr6:2766350-2766398
64251 chr2 44547732 44547732 1 - G A PAAD 44547734 - 44547714 44547754 41 CAGTACACTGGAATAGCATGCTCGATTGGAAACAAAGCATC CAGTACACTGGAATAGCATGCTTGATTGGAAACAAAGCATC < 41bp 0.771407738703753 0.512299150166712 0.1568164 0.08663541 prediction 0.518217177074084 Functional Loss - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44547734 chr2:44547732 nonsynonymous SNV 0.916 2 23 hm5C_associated_SNPs_62499 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:44547642-44547753
64251 chr2 74074811 74074811 1 + G T BLCA 74074809 + 74074789 74074829 41 GCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCAC GCCTTCAGACTGTCACACAACTTTAAGGCCAGCTAAGCCAC < 41bp 0.759095329590841 0.425982801181499 0.14153245 0.1114831 prediction 0.518190659181683 Functional Loss - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074809 chr2:74074811 nonsynonymous SNV 0.805 0 23 hm5C_associated_SNPs_62503 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:74074775-74074811
64251 chr6 3155141 3155141 1 - C G rs188542181 3155145 - 3155125 3155165 41 TCTGGCAGGCCAGAGTGGAGCCGGGAATAACTGGGCCAAGG TCTGGCAGGCCAGAGTGGAGCCGGCAATAACTGGGCCAAGG < 41bp 0.759081485604453 0.470727234202683 0.9213706 0.8997958 prediction 0.518162971208907 Functional Loss - TUBB2A ENSG00000137267 CDS Human protein_coding chr6:3155145 chr6:3155141 synonymous SNV . 0 25 hm5C_associated_SNPs_62504 0 0 2 BUD13 POSTAR2 ENCODE chr6:3155132-3155193
64251 chr7 107399174 107399174 1 + C T UCEC 107399172 + 107399152 107399192 41 GCCTCCACAGCAACATTATGCACCACCCCCACCTCCTCCAC GCCTCCACAGCAACATTATGCATCACCCCCACCTCCTCCAC < 41bp 0.759064765557212 0.494509993670914 0.0066245794 0.010781229 prediction 0.518129531114424 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399172 chr7:107399174 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62507 0 0 11 RBPMS POSTAR2 SRX484627 chr7:107399160-107399180
64251 chr1 45227595 45227595 1 + C T UCEC 45227593 + 45227573 45227613 41 ACCCCTCTTTTGCAGATTGCCACGATCTCACCAGGCATAAG ACCCCTCTTTTGCAGATTGCCATGATCTCACCAGGCATAAG < 41bp 0.800872772157728 0.541818243463891 0.047510773 0.10028419 prediction 0.518109057387674 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45227593 chr1:45227595 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_62510 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:45227590-45227624
64251 chr3 16344253 16344253 1 + C T COAD 16344251 + 16344231 16344271 41 GCGGAACTCAAGCCATACATCACGGGTGAGTCCCCTAAAGA GCGGAACTCAAGCCATACATCATGGGTGAGTCCCCTAAAGA < 41bp 0.765380762557209 0.506360757321349 0.94217145 0.94212604 prediction 0.518040010471721 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16344251 chr3:16344253 nonsynonymous SNV 0.950 5 23 hm5C_associated_SNPs_62518 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:16344215-16344256
64251 chr3 120500093 120500093 1 + C T rs3732401 120500091 + 120500071 120500111 41 CAGTGAGTCAGATGATGATTCTCCACCCCGTCCGGCAGCTG CAGTGAGTCAGATGATGATTCTTCACCCCGTCCGGCAGCTG < 41bp 0.811558450484271 0.552547460569517 0.6785079 0.06528014 prediction 0.518021979829508 Functional Loss - GTF2E1 ENSG00000153767 CDS Human protein_coding chr3:120500091 chr3:120500093 nonsynonymous SNV 0.906 1 23 hm5C_associated_SNPs_62519 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr3:120500087-120500108
64251 chr3 45527224 45527224 1 + G T STAD 45527222 + 45527202 45527242 41 TGGCTGTGAACATGCTTACCCAGCAGGAGGTCCCTGTCGTT TGGCTGTGAACATGCTTACCCATCAGGAGGTCCCTGTCGTT < 41bp 0.759000774845667 0.419722173739659 0.05962342 0.034036547 prediction 0.518001549691334 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45527222 chr3:45527224 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_62524 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:45527198-45527230
64251 chr7 44252904 44252904 1 + G C rs190493439 44252900 + 44252880 44252920 41 GTGGGTCTCTCCCTTGAGCACCAGGAGTGGGTGCCAGCCGG GTGGGTCTCTCCCTTGAGCACCAGCAGTGGGTGCCAGCCGG < 41bp 0.803977081199388 0.544981946438848 0.80114174 0.23357975 prediction 0.517990269521081 Functional Loss - YKT6 ENSG00000106636 UTR3 Human protein_coding chr7:44252900 chr7:44252904 . . 0 25 hm5C_associated_SNPs_62527 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:44252808-44252904
64251 chr1 220928441 220928441 1 + C T BLCA 220928439 + 220928419 220928459 41 TTGCCTAGCAAGCAGCCTTCCTCAAACAAACTCCACAACTG TTGCCTAGCAAGCAGCCTTCCTTAAACAAACTCCACAACTG < 41bp 0.802555245115133 0.543569636259567 0.27987742 0.15789822 prediction 0.517971217711131 Functional Loss - MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928439 chr1:220928441 nonsynonymous SNV 0.077 0 23 hm5C_associated_SNPs_62530 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:220928433-220928458
64251 chr19 8503305 8503305 1 + G T OV 8503303 + 8503283 8503323 41 CTACCACTGCCAGCTGTACTCCGAGTGGAGAAAGACCAACC CTACCACTGCCAGCTGTACTCCTAGTGGAGAAAGACCAACC < 41bp 0.758981320338131 0.422634298933463 0.7801304 0.21826407 prediction 0.517962640676261 Functional Loss - MARCH2 ENSG00000099785 CDS Human protein_coding chr19:8503303 chr19:8503305 stopgain 0.966 1 23 hm5C_associated_SNPs_62534 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:8503305-8503306
64251 chr3 101431544 101431544 1 + G T SARC 101431542 + 101431522 101431562 41 GTGCTATTGAAATGTGCAGACAGCAGAGACTGGCTGAGTGG GTGCTATTGAAATGTGCAGACATCAGAGACTGGCTGAGTGG < 41bp 0.848665785042186 0.589690136408325 0.4039622 0.36022538 prediction 0.517951297267721 Functional Loss - PDCL3P4 ENSG00000244119 ncRNA_exonic Human processed_pseudogene chr3:101431542 chr3:101431544 . . 0 23 hm5C_associated_SNPs_62535 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:101431524-101431547
64251 chr2 176958368 176958368 1 + G T LUAD 176958366 + 176958346 176958386 41 ACTGCACCAAGGACCAGCCACAGGGGTCCCACTTTTGGAAA ACTGCACCAAGGACCAGCCACATGGGTCCCACTTTTGGAAA < 41bp 0.888530794741289 0.629560072103935 0.93663824 0.2656301 prediction 0.517941445274708 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176958366 chr2:176958368 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_62536 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:176958360-176958382
64251 chr14 24030595 24030595 1 - C A OV 24030597 - 24030577 24030617 41 AGATCTCCTGGATGGGGCTTCTGGGGATGTCCAGCATCCTC AGATCTCCTGGATGGGGCTTCTTGGGATGTCCAGCATCCTC < 41bp 0.884185930626741 0.625222416426363 0.4047086 0.3409609 prediction 0.517927028400757 Functional Loss - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24030597 chr14:24030595 nonsynonymous SNV 0.802 2 23 hm5C_associated_SNPs_62539 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24030588-24030626
64251 chrX 38664318 38664318 1 + A T LGG 38664314 + 38664294 38664334 41 TGATGGTGCCCAGCTTGCTGCGCGACGTGCCCCTGGCTGAC TGATGGTGCCCAGCTTGCTGCGCGTCGTGCCCCTGGCTGAC < 41bp 0.864674019676828 0.605715318153403 0.47209415 0.13836005 prediction 0.51791740304685 Functional Loss - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664314 chrX:38664318 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_62542 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:38664280-38664318
64251 chr12 120428048 120428048 1 + G T SARC 120428045 + 120428025 120428065 41 AGGCGCTGCTCGAGAGGAACCAGGACATGAGCCGGCAGTAC AGGCGCTGCTCGAGAGGAACCAGTACATGAGCCGGCAGTAC < 41bp 0.907072905029887 0.648116161329555 0.8895829 0.8202002 prediction 0.517913487400664 Functional Loss - BICDL1 ENSG00000135127 CDS Human protein_coding chr12:120428045 chr12:120428048 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_62543 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:120428040-120428060
64251 chr2 207631494 207631494 1 + G T HNSC 207631492 + 207631472 207631512 41 AACAAAGCGGGCTCCTTTTTCTGGAACCTTAGACAATTCAG AACAAAGCGGGCTCCTTTTTCTTGAACCTTAGACAATTCAG < 41bp 0.83915327945012 0.580200461076536 0.26775584 0.23198548 prediction 0.517905636747169 Functional Loss - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207631492 chr2:207631494 nonsynonymous SNV 0.858 1 23 hm5C_associated_SNPs_62544 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207631474-207631512
64251 chr1 230371813 230371813 1 + C T STAD 230371811 + 230371791 230371831 41 CCGGCCACCAGCGTGGTGATCACGTTTCACAATGAAGCCAG CCGGCCACCAGCGTGGTGATCATGTTTCACAATGAAGCCAG < 41bp 0.77577372499449 0.516821868268366 0.41311353 0.4655766 prediction 0.517903713452248 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371811 chr1:230371813 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_62545 0 0 7 BUD13 POSTAR2 ENCODE chr1:230371767-230371828
64251 chr7 143079962 143079962 1 + A T rs141742199 143079958 + 143079938 143079978 41 TTCCAAGTCCAGTACCAAGCCTGCAGCCGGGGGCACAGCAC TTCCAAGTCCAGTACCAAGCCTGCTGCCGGGGGCACAGCAC < 41bp 0.870671639751649 0.611728265141425 0.32523483 0.16149905 prediction 0.517886749220448 Functional Loss - ZYX ENSG00000159840 CDS Human protein_coding chr7:143079958 chr7:143079962 synonymous SNV . 0 25 hm5C_associated_SNPs_62546 0 0 3 IGF2BP1 POSTAR2 ENCODE chr7:143079896-143079996
64251 chr6 13599303 13599303 1 + C T rs3757261 13599301 + 13599281 13599321 41 GCGGGGGCTTGCTGCGACCTCACGTCGTGTGGTTTGGAGAA GCGGGGGCTTGCTGCGACCTCATGTCGTGTGGTTTGGAGAA < 41bp 0.798480841110107 0.539542710113039 0.123336375 0.11527583 prediction 0.517876261994136 Functional Loss - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13599301 chr6:13599303 synonymous SNV . 0 23 hm5C_associated_SNPs_62549 0 0 3 GRWD1 POSTAR2 ENCODE chr6:13599263-13599380
64251 chr11 66262860 66262860 1 + G C HNSC 66262856 + 66262836 66262876 41 ATTCAGAGCTGGTATCGGAGCGGGGAGACCTGGGATAGCAA ATTCAGAGCTGGTATCGGAGCGGGCAGACCTGGGATAGCAA < 41bp 0.824580164686391 0.565655689804472 0.91975 0.89349425 prediction 0.517848949763837 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262856 chr11:66262860 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_62550 0 0 3 BUD13 POSTAR2 ENCODE chr11:66262786-66262890
64251 chr17 59485475 59485475 1 + G T UCEC 59485473 + 59485453 59485493 41 CCCCTACACCTACATGGCAGCAGCAGCCGCAGCCGCCTCGG CCCCTACACCTACATGGCAGCATCAGCCGCAGCCGCCTCGG < 41bp 0.837761147758614 0.578845109839905 0.32071346 0.01876092 prediction 0.517832075837419 Functional Loss - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59485473 chr17:59485475 nonsynonymous SNV 0.966 3 23 hm5C_associated_SNPs_62552 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:59485426-59485480
64251 chr4 128584715 128584715 1 + C T UCEC 128584713 + 128584693 128584733 41 TTATGTATCTCACACTACAGCTCGACTCAGAAACCTCAAAG TTATGTATCTCACACTACAGCTTGACTCAGAAACCTCAAAG < 41bp 0.790014512240564 0.531105986237367 0.008571714 0.014810413 prediction 0.517817052006393 Functional Loss - INTU ENSG00000164066 CDS Human protein_coding chr4:128584713 chr4:128584715 synonymous SNV . 0 23 hm5C_associated_SNPs_62553 0 0 2 GRWD1 POSTAR2 ENCODE chr4:128584539-128584739
64251 chr15 90785079 90785079 1 + G T KIRC 90785077 + 90785057 90785097 41 TCACAGGGGTCCGAGTAATTCTGTGGGCCCGGAAGTCCAGC TCACAGGGGTCCGAGTAATTCTTTGGGCCCGGAAGTCCAGC < 41bp 0.758907945014734 0.420706996855221 0.3000064 0.12610129 prediction 0.517815890029468 Functional Loss - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90785077 chr15:90785079 synonymous SNV . 0 23 hm5C_associated_SNPs_62554 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr15:90785076-90785105
64251 chr17 27185427 27185427 1 + C T SARC 27185425 + 27185405 27185445 41 GGATGTCTCAGACAAGTGGACACGGAACCAGCTCAGCCCCC GGATGTCTCAGACAAGTGGACATGGAACCAGCTCAGCCCCC < 41bp 0.778223196240635 0.519315995899632 0.4027379 0.40249678 prediction 0.517814400682007 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27185425 chr17:27185427 nonsynonymous SNV 0.988 5 23 hm5C_associated_SNPs_62555 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:27185368-27185452
64251 chr8 42010604 42010604 1 + G C rs144817752 42010603 + 42010583 42010623 41 CCGCGCCTAGGAGCAGTGGGCGCTGAGAGCAGCAAGGCCAG CCGCGCCTAGGAGCAGTGGGCCCTGAGAGCAGCAAGGCCAG < 41bp 0.762617047659203 0.503718244744434 0.79541314 0.2922736 prediction 0.517797605829538 Functional Loss - AP3M2 ENSG00000070718 UTR5 Human protein_coding chr8:42010603 chr8:42010604 . . 0 22 hm5C_associated_SNPs_62557 0 0 1 NCBP2 POSTAR2 ENCODE chr8:42010565-42010732
64251 chr5 917594 917594 1 + G T rs115079969 917592 + 917572 917612 41 AATGCAGGTGTTATAGAAGCCAGAAGAGAAACTGTGTCACC AATGCAGGTGTTATAGAAGCCATAAGAGAAACTGTGTCACC < 41bp 0.758881655313072 0.452039410750284 0.72262573 0.20831555 prediction 0.517763310626145 Functional Loss - TRIP13 ENSG00000071539 UTR3 Human protein_coding chr5:917592 chr5:917594 . . 0 23 hm5C_associated_SNPs_62562 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:917529-917618
64251 chr6 160517598 160517598 1 + C T STAD 160517596 + 160517576 160517616 41 ACGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTGCCAG ACGGGATCCCCGAGTTCAGTCATGAGACTGCCGACTGCCAG < 41bp 0.776188608640175 0.517307961281421 0.33512992 0.34567705 prediction 0.517761294717508 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160517596 chr6:160517598 synonymous SNV . 0 23 hm5C_associated_SNPs_62563 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:160517596-160517634
64251 chrX 70832741 70832741 1 + C T rs2280962 70832739 + 70832719 70832759 41 TGCTACACCAAATCGTTGGACACCAGCCGCTTCATCTGTGC TGCTACACCAAATCGTTGGACATCAGCCGCTTCATCTGTGC < 41bp 0.758879696243989 0.487486722423855 0.18617615 0.2682045 prediction 0.517759392487977 Functional Loss - GCNA ENSG00000147174 CDS Human protein_coding chrX:70832739 chrX:70832741 nonsynonymous SNV 0.009 2 23 hm5C_associated_SNPs_62564 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:70832734-70832761
64251 chr11 62503008 62503008 1 + C T SKCM 62503006 + 62502986 62503026 41 ATGACCAGGCCCGCCACTACCTCCTGGCTGCCGTGAATAGG ATGACCAGGCCCGCCACTACCTTCTGGCTGCCGTGAATAGG < 41bp 0.758854239309603 0.47582014768806 0.19513014 0.07710907 prediction 0.517708478619207 Functional Loss - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62503006 chr11:62503008 synonymous SNV . 0 23 hm5C_associated_SNPs_62569 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62502985-62503015
64251 chr1 201966627 201966627 1 + G T OV 201966624 + 201966604 201966644 41 AACGCCAACTGGGGTGAATTCTGGCTCAATGAAGGTTTCAC AACGCCAACTGGGGTGAATTCTGTCTCAATGAAGGTTTCAC < 41bp 0.758849093380058 0.365965755656779 0.35950005 0.11909363 prediction 0.517698186760116 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966624 chr1:201966627 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62570 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:201966621-201966654
64251 chrX 153663842 153663842 1 + G T UCEC 153663840 + 153663820 153663860 41 CTCCCTGGCAGATGATGCTTCAGGACTTCCAGGTATGGAGC CTCCCTGGCAGATGATGCTTCATGACTTCCAGGTATGGAGC < 41bp 0.889095219012371 0.630251127448317 0.7848286 0.10340631 prediction 0.517688183128109 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663840 chrX:153663842 nonsynonymous SNV 0.918 0 23 hm5C_associated_SNPs_62571 0 0 1 SND1 POSTAR2 ENCODE chrX:153663787-153663843
64251 chr7 100468269 100468269 1 + C T UCEC 100468267 + 100468247 100468287 41 TGGCCCTTGATCGCGTCTTTCACGTGGGCTGCTTTGTATGT TGGCCCTTGATCGCGTCTTTCATGTGGGCTGCTTTGTATGT < 41bp 0.769765959911045 0.510926928867975 0.272927 0.4089864 prediction 0.517678062086141 Functional Loss - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100468267 chr7:100468269 synonymous SNV . 0 23 hm5C_associated_SNPs_62573 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:100468219-100468270
64251 chr1 111435056 111435056 1 + G T HNSC 111435053 + 111435033 111435073 41 TTCCATAACCTCCCCTCCCTCACGCTGGGCAATGTGTTTGT TTCCATAACCTCCCCTCCCTCACTCTGGGCAATGTGTTTGT < 41bp 0.758831556721274 0.368932454566229 0.056881815 0.030412167 prediction 0.517663113442547 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111435053 chr1:111435056 synonymous SNV . 0 24 hm5C_associated_SNPs_62577 0 0 1 RPS3 POSTAR2 ENCODE chr1:111434986-111435066
64251 chr9 138396198 138396198 1 + A C rs3748201 138396194 + 138396174 138396214 41 AACAGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCC AACAGAGCACAGAGGGTGAGCGACCTGTGCAGAACGGCCCC < 41bp 0.903424804337762 0.644612588545936 0.3793315 0.3139401 prediction 0.517624431583652 Functional Loss - LOC101928525 ENSG00000226706 ncRNA_intronic Human antisense chr9:138396194 chr9:138396198 . . 0 25 hm5C_associated_SNPs_62583 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:138396185-138396205
64251 chr11 70281197 70281197 1 + G C LUSC 70281193 + 70281173 70281213 41 ACCAACATCGAGATGATTGACGACGGCTGGTGGCGCGGGGT ACCAACATCGAGATGATTGACGACCGCTGGTGGCGCGGGGT < 41bp 0.783656019409084 0.524847792699502 0.27547187 0.14202225 prediction 0.517616453419163 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281193 chr11:70281197 nonsynonymous SNV 0.625 4 25 hm5C_associated_SNPs_62586 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70281150-70281227
64251 chr15 83424801 83424801 1 + G T PAAD 83424798 + 83424778 83424818 41 TCTTGTTTGCAAAATAAATTCAAGACCTACTTATCTACCAA TCTTGTTTGCAAAATAAATTCAATACCTACTTATCTACCAA < 41bp 0.758803913446436 0.454245725848564 0.118249476 0.14231244 prediction 0.517607826892872 Functional Loss - SCARNA15 ENSG00000252690 ncRNA_exonic Human processed_transcript chr15:83424798 chr15:83424801 . . 0 24 hm5C_associated_SNPs_62587 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr15:83424786-83424822
64251 chr1 100606565 100606565 1 + C T HNSC 100606563 + 100606543 100606583 41 ATCCTAGTGGAAAAGGTGACCACAAGATTCAAGGTAAGTGA ATCCTAGTGGAAAAGGTGACCATAAGATTCAAGGTAAGTGA < 41bp 0.758782966627647 0.491486154338946 0.0418638 0.03834337 prediction 0.517565933255295 Functional Loss - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100606563 chr1:100606565 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_62590 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:100606542-100606568
64251 chr4 37831664 37831664 1 + C T STAD 37831662 + 37831642 37831682 41 ACTACGAAAATGTTTTGGGGCCCGAATGGAGTTTGGGACAG ACTACGAAAATGTTTTGGGGCCTGAATGGAGTTTGGGACAG < 41bp 0.807105594523574 0.54832454006625 0.2412439 0.40614417 prediction 0.517562108914648 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37831662 chr4:37831664 stopgain 0.988 1 23 hm5C_associated_SNPs_62591 0 0 2 PPIG POSTAR2 ENCODE chr4:37831625-37831726
64251 chr1 82456281 82456281 1 + A T LUAD 82456277 + 82456257 82456297 41 AACAACTTACGGGGCAGCAGCAAGACTCACAACCTCGAGCT AACAACTTACGGGGCAGCAGCAAGTCTCACAACCTCGAGCT < 41bp 0.758755168044983 0.469970743564873 0.49942762 0.17209244 prediction 0.517510336089966 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456277 chr1:82456281 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_62595 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:82456249-82456308
64251 chr8 73959291 73959291 1 + A C rs117652973 73959287 + 73959267 73959307 41 GTGGGGAGCGGGAGCAAGAGCTGAAAAACTTACCTACTGGG GTGGGGAGCGGGAGCAAGAGCTGACAAACTTACCTACTGGG < 41bp 0.865178297710462 0.60643288530904 0.87136304 0.6762706 prediction 0.517490824802843 Functional Loss - TERF1 ENSG00000147601 UTR3 Human protein_coding chr8:73959287 chr8:73959291 . . 0 25 hm5C_associated_SNPs_62596 0 0 11 MOV10 POSTAR2 GSE37524,GSM921128 chr8:73959280-73959300
64251 chr6 167711490 167711490 1 + C T UCEC 167711488 + 167711468 167711508 41 GCCAGTGACTGCCTGATGGCCACCACAACCACCAACAGCAC GCCAGTGACTGCCTGATGGCCATCACAACCACCAACAGCAC < 41bp 0.758735097295659 0.491793556175215 0.08031124 0.16433948 prediction 0.517470194591317 Functional Loss - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167711488 chr6:167711490 nonsynonymous SNV 0.075 0 23 hm5C_associated_SNPs_62597 0 0 2 BUD13 POSTAR2 ENCODE chr6:167711378-167711509
64251 chr5 176795135 176795135 1 + G T BRCA 176795132 + 176795112 176795152 41 GGTGAGGGCGGGGGGCTGTTCGCGTTCATCGCTCCCTCTTC GGTGAGGGCGGGGGGCTGTTCGCTTTCATCGCTCCCTCTTC < 41bp 0.758730336634479 0.363759295087221 0.5798136 0.104727924 prediction 0.517460673268958 Functional Loss - RGS14 ENSG00000169220 intronic Human protein_coding chr5:176795132 chr5:176795135 . . 0 24 hm5C_associated_SNPs_62598 0 0 1 GPKOW POSTAR2 ENCODE chr5:176795133-176795185
64251 chr17 37884214 37884214 1 + G T ESCA 37884211 + 37884191 37884231 41 ATTACTGGGACCAGGACCCACCAGAGCGGGGGGCTCCACCC ATTACTGGGACCAGGACCCACCATAGCGGGGGGCTCCACCC < 41bp 0.758714448280589 0.383217869469417 0.30257618 0.1885593 prediction 0.517428896561177 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37884211 chr17:37884214 stopgain 0.950 0 24 hm5C_associated_SNPs_62600 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:37884183-37884214
64251 chr17 74381706 74381706 1 + G C rs199677032 74381702 + 74381682 74381722 41 CAGCGCCAGGGACCCCCTGGCAGCGGGAGCCGCGGGTCGAG CAGCGCCAGGGACCCCCTGGCAGCCGGAGCCGCGGGTCGAG < 41bp 0.76453562679008 0.505821187433648 0.86324346 0.253789 prediction 0.517428878712864 Functional Loss - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74381702 chr17:74381706 nonsynonymous SNV 0.065 1 25 hm5C_associated_SNPs_62601 0 0 2 PRPF8 POSTAR2 ENCODE chr17:74381673-74381806
64251 chr6 30881673 30881673 1 + G T UCS 30881670 + 30881650 30881690 41 GAGCTGGGCGTGCTCGTGTTCGAGAACTCGGCCAAGCGGCT GAGCTGGGCGTGCTCGTGTTCGATAACTCGGCCAAGCGGCT < 41bp 0.771637034065857 0.51294373794799 0.83668756 0.07156849 prediction 0.517386592235736 Functional Loss - GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30881670 chr6:30881673 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_62606 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr6:30881659-30881685
64251 chr11 47603753 47603753 1 + G T LUAD 47603750 + 47603730 47603770 41 TCTGTGTTCAAGGCAGCCAACTGGTATGAAAGGGAGGTGAG TCTGTGTTCAAGGCAGCCAACTGTTATGAAAGGGAGGTGAG < 41bp 0.758691226773915 0.365451225137287 0.31675225 0.24410045 prediction 0.51738245354783 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47603750 chr11:47603753 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_62607 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:47603708-47603759
64251 chr8 92082586 92082586 1 + G T SARC 92082583 + 92082563 92082603 41 CTAGCCGGTGCAGGTTTCTTCTAGCGCGTGTGCTGGGGTAC CTAGCCGGTGCAGGTTTCTTCTATCGCGTGTGCTGGGGTAC < 41bp 0.758685417592995 0.38857556809296 0.7519487 0.30519444 prediction 0.51737083518599 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92082583 chr8:92082586 nonsynonymous SNV 0.010 1 24 hm5C_associated_SNPs_62609 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:92082561-92082590
64251 chr17 34171487 34171487 1 + G T LIHC 34171485 + 34171465 34171505 41 CATTTCTACCTTGCAGATTTCCGGGGGAGAGGCTACGGTGG CATTTCTACCTTGCAGATTTCCTGGGGAGAGGCTACGGTGG < 41bp 0.758676753767503 0.405479713514812 0.93870056 0.84928 prediction 0.517353507535005 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171485 chr17:34171487 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_62613 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:34171480-34171508
64251 chr19 50304245 50304245 1 + A C UCEC 50304241 + 50304221 50304261 41 CTCCAGGCCCCTGCCTGTCACGAGAACATGGTGAAGGTTGG CTCCAGGCCCCTGCCTGTCACGAGCACATGGTGAAGGTTGG < 41bp 0.758676555431317 0.350713845275485 0.8625854 0.3879189 prediction 0.517353110862633 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50304241 chr19:50304245 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_62614 0 0 3 DDX6 POSTAR2 ENCODE chr19:50304236-50304297
64251 chr20 34828309 34828309 1 + C T LGG 34828307 + 34828287 34828327 41 CCATGAAGCACACCAAGGACCGCGTGGGGCAGAATCTACCC CCATGAAGCACACCAAGGACCGTGTGGGGCAGAATCTACCC < 41bp 0.763874351961668 0.505215174212306 0.57802236 0.3229346 prediction 0.517318355498724 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828307 chr20:34828309 synonymous SNV . 0 23 hm5C_associated_SNPs_62620 0 0 1 RBM15 POSTAR2 ENCODE chr20:34828266-34828318
64251 chr8 92086139 92086139 1 + G T UCEC 92086137 + 92086117 92086157 41 TATCAAAAGCACAAAAGAGACGGGTATGAAAGTCATGTCAC TATCAAAAGCACAAAAGAGACGTGTATGAAAGTCATGTCAC < 41bp 0.769368053538859 0.51072527606809 0.31687373 0.20359725 prediction 0.517285554941538 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92086137 chr8:92086139 synonymous SNV . 0 23 hm5C_associated_SNPs_62626 0 0 1 PPIG POSTAR2 ENCODE chr8:92086058-92086146
64251 chr17 46628442 46628442 1 - C A PRAD 46628445 - 46628425 46628465 41 GGGGAGGGGACAAGAGCCCCCCGGGGTCGGCGGCGTCCAAG GGGGAGGGGACAAGAGCCCCCCGTGGTCGGCGGCGTCCAAG < 41bp 0.904650647838925 0.646011346195086 0.84752285 0.18541741 prediction 0.517278603287678 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628445 chr17:46628442 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_62628 0 0 1 BUD13 POSTAR2 ENCODE chr17:46628411-46628477
64251 chr2 12863597 12863597 1 + C T STAD 12863595 + 12863575 12863615 41 AGACTGTTCTACCAGATTGCCTCGGCAGTGGCCCACTGCCA AGACTGTTCTACCAGATTGCCTTGGCAGTGGCCCACTGCCA < 41bp 0.758638095161576 0.485908055397039 0.13794458 0.17222267 prediction 0.517276190323152 Functional Loss - TRIB2 ENSG00000071575 CDS Human protein_coding chr2:12863595 chr2:12863597 nonsynonymous SNV 0.960 1 23 hm5C_associated_SNPs_62629 0 0 1 DGCR8 POSTAR2 ENCODE chr2:12863554-12863597
64251 chr22 46096203 46096203 1 + C T COAD 46096201 + 46096181 46096221 41 GTTTTTAGGCAACATTGCCTCACGGAATGAAGATTCCCAGT GTTTTTAGGCAACATTGCCTCATGGAATGAAGATTCCCAGT < 41bp 0.78818732021353 0.529555554415467 0.18280861 0.2378369 prediction 0.517263531596126 Functional Loss - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46096201 chr22:46096203 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_62634 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46096174-46096204
64251 chr12 65564430 65564430 1 + A T KIRC 65564426 + 65564406 65564446 41 GGAGGGTGTGATCAAGTGGACTCCAGCCCCGTTCCTAGATA GGAGGGTGTGATCAAGTGGACTCCTGCCCCGTTCCTAGATA < 41bp 0.758630366629564 0.428293630305942 0.9269566 0.15706357 prediction 0.517260733259127 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564426 chr12:65564430 nonsynonymous SNV 0.571 1 25 hm5C_associated_SNPs_62636 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:65564418-65564445
64251 chr3 53899087 53899087 1 + G T UCEC 53899084 + 53899064 53899104 41 GCAGTCCCAGTGAGAACTCTCAAGACCTCTTCCCCCTTGCC GCAGTCCCAGTGAGAACTCTCAATACCTCTTCCCCCTTGCC < 41bp 0.758605824093212 0.358145438023002 0.8904344 0.12113789 prediction 0.517211648186424 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53899084 chr3:53899087 nonsynonymous SNV 0.966 4 24 hm5C_associated_SNPs_62639 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:53899080-53899100
64251 chr20 47700588 47700588 1 + C T UCEC 47700586 + 47700566 47700606 41 CCAAAAGAACATCTTTTAGTCTCGATTCCTCTCTTGATTAA CCAAAAGAACATCTTTTAGTCTTGATTCCTCTCTTGATTAA < 41bp 0.816226133109602 0.557641259476438 0.289737 0.029349118 prediction 0.517169747266327 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47700586 chr20:47700588 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_62644 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221657 chr20:47700580-47700600
64251 chr16 53488672 53488672 1 + C T COAD 53488670 + 53488650 53488690 41 GAGGAGGAAATTGGGACTCTCTCAAGGTGTCTGAACGCTGG GAGGAGGAAATTGGGACTCTCTTAAGGTGTCTGAACGCTGG < 41bp 0.819480632746406 0.56089821499397 0.42009452 0.47664312 prediction 0.517164835504873 Functional Loss - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53488670 chr16:53488672 nonsynonymous SNV 0.880 1 23 hm5C_associated_SNPs_62646 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:53488617-53488672
64251 chr7 86991139 86991139 1 + G T UCEC 86991136 + 86991116 86991156 41 CTGCAAGGTTCCAGGAATTACTAGAGACTCCATTATGAATT CTGCAAGGTTCCAGGAATTACTATAGACTCCATTATGAATT < 41bp 0.758578657181549 0.395902649176849 0.6249362 0.19116595 prediction 0.517157314363098 Functional Loss - CROT ENSG00000005469 CDS Human protein_coding chr7:86991136 chr7:86991139 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_62648 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:86991131-86991150
64251 chr2 220379586 220379586 1 + G T UCEC 220379584 + 220379564 220379604 41 CGAGACCTGGCCACCTTTGCCAGCACCAGCACCCTGCATGG CGAGACCTGGCCACCTTTGCCATCACCAGCACCCTGCATGG < 41bp 0.884785368464285 0.62620851366855 0.7945241 0.07317197 prediction 0.517153709591471 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379584 chr2:220379586 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_62649 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379542-220379620
64251 chr5 137522065 137522065 1 + G T ESCA 137522062 + 137522042 137522082 41 GAGAGCTTGTTGCCACAGCACTGGGGCAGGAAAACTTCGTC GAGAGCTTGTTGCCACAGCACTGTGGCAGGAAAACTTCGTC < 41bp 0.758569419485032 0.374620597087068 0.23469141 0.03667438 prediction 0.517138838970064 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137522062 chr5:137522065 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62650 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:137522033-137522068
64251 chr1 90179033 90179033 1 + G T UCEC 90179031 + 90179011 90179051 41 TGTGGACATTCAGGACATGACTGGATATAAAAACTTTTCTT TGTGGACATTCAGGACATGACTTGATATAAAAACTTTTCTT < 41bp 0.840074534220348 0.581513370168455 0.25754923 0.08378449 prediction 0.517122328103786 Functional Loss - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90179031 chr1:90179033 stopgain 0.999 1 23 hm5C_associated_SNPs_62651 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:90179003-90179033
64251 chr16 3169720 3169720 1 + G T UCEC 3169718 + 3169698 3169738 41 GCCGCAGCTCGCACCTCATCCAGCACCAGATCATCCACACG GCCGCAGCTCGCACCTCATCCATCACCAGATCATCCACACG < 41bp 0.758555266750874 0.422209455080215 0.29087812 0.02234435 prediction 0.517110533501748 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3169718 chr16:3169720 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_62654 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr16:3169708-3169738
64251 chr19 12856282 12856282 1 + A C STAD 12856278 + 12856258 12856298 41 GCATGGGCAAGAAGATGATGCAGGAGGCCATGAGCGCATTT GCATGGGCAAGAAGATGATGCAGGCGGCCATGAGCGCATTT < 41bp 0.91522296923954 0.65666817396194 0.78807753 0.86050344 prediction 0.517109590555201 Functional Loss - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12856278 chr19:12856282 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_62655 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:12856230-12856287
64251 chr3 4358342 4358342 1 + C T UCEC 4358340 + 4358320 4358360 41 GCAACCACAACGAACCATTTCTCGATCGGATTGTGACGTGT GCAACCACAACGAACCATTTCTTGATCGGATTGTGACGTGT < 41bp 0.809827799272785 0.551293357398136 0.8622027 0.05245304 prediction 0.517068883749299 Functional Loss - SETMAR ENSG00000170364 CDS Human protein_coding chr3:4358340 chr3:4358342 synonymous SNV . 0 23 hm5C_associated_SNPs_62663 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:4358300-4358356
64251 chr3 160474348 160474348 1 + G T UCEC 160474345 + 160474325 160474365 41 GTGCTCGAGGCCGAGTTTTCCAAGACCTGGGAGTTCAAGAA GTGCTCGAGGCCGAGTTTTCCAATACCTGGGAGTTCAAGAA < 41bp 0.798894120080923 0.540387716172772 0.9070168 0.42438647 prediction 0.517012807816303 Functional Loss - PPM1L ENSG00000163590 CDS Human protein_coding chr3:160474345 chr3:160474348 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_62668 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr3:160474340-160474360
64251 chrX 155252871 155252871 1 + C T CESC 155252869 + 155252849 155252889 41 ACACTGAGGTAGCCGAGCCTCTCAAGGCAGGTGAGCTGGGT ACACTGAGGTAGCCGAGCCTCTTAAGGCAGGTGAGCTGGGT < 41bp 0.771090516708341 0.51260176978978 0.46787524 0.2463254 prediction 0.516977493837121 Functional Loss - WASIR1;DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155252869 chrX:155252871 . . 0 23 hm5C_associated_SNPs_62671 0 0 4 DDX24 POSTAR2 ENCODE chrX:155252793-155252872
64251 chr12 100957134 100957134 1 + A C UCEC 100957130 + 100957110 100957150 41 TTCACCAGCCTGAAAATCCTCAACACTTTGCCTGTCTCCTG TTCACCAGCCTGAAAATCCTCAACCCTTTGCCTGTCTCCTG < 41bp 0.758480984136217 0.359002446025858 0.1005452 0.08105013 prediction 0.516961968272434 Functional Loss - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100957130 chr12:100957134 nonsynonymous SNV 0.642 2 25 hm5C_associated_SNPs_62672 0 0 1 IGF2BP3 POSTAR2 ENCODE chr12:100957125-100957285
64251 chr4 106888415 106888415 1 + C T COAD 106888413 + 106888393 106888433 41 CTGCACGCTTGGTGCTACCTCTCGGCCGCCTCATGCATTCA CTGCACGCTTGGTGCTACCTCTTGGCCGCCTCATGCATTCA < 41bp 0.811063042984977 0.552588170133555 0.07520962 0.053498566 prediction 0.516949745702845 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106888413 chr4:106888415 synonymous SNV . 0 23 hm5C_associated_SNPs_62674 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:106888400-106888429
64251 chr11 47298301 47298301 1 + G T UCEC 47298298 + 47298278 47298318 41 GACAGGTGGTGCTACAGTCCCGAGACTACAATGCACTCTCC GACAGGTGGTGCTACAGTCCCGATACTACAATGCACTCTCC < 41bp 0.75846764805103 0.381547057787091 0.9315944 0.91275036 prediction 0.51693529610206 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47298298 chr11:47298301 nonsynonymous SNV 0.976 4 24 hm5C_associated_SNPs_62678 0 0 1 PRPF8 POSTAR2 ENCODE chr11:47298259-47298305
64251 chr2 105716151 105716151 1 + C T STAD 105716149 + 105716129 105716169 41 TGGACTACTTACTACTGATCCACGTGTGAGGGAACGGAAGA TGGACTACTTACTACTGATCCATGTGTGAGGGAACGGAAGA < 41bp 0.763381453400367 0.504916285437899 0.14555627 0.10252121 prediction 0.516930335924936 Functional Loss - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105716149 chr2:105716151 nonsynonymous SNV 0.007 4 23 hm5C_associated_SNPs_62679 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:105716137-105716164
64251 chr3 10191571 10191571 1 + G T KIRC 10191569 + 10191549 10191589 41 TCAGGTCGCTCTACGAAGATCTGGAAGACCACCCAAATGTG TCAGGTCGCTCTACGAAGATCTTGAAGACCACCCAAATGTG < 41bp 0.854965639564933 0.596507811717321 0.2580072 0.017676413 prediction 0.516915655695224 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191569 chr3:10191571 synonymous SNV . 0 23 hm5C_associated_SNPs_62681 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr1 28836028 28836028 1 + G T rs183555246 28836026 + 28836006 28836046 41 CTCCTAAAGTGCTGGGATTACAGCTGTGAGCCACCCTGCCC CTCCTAAAGTGCTGGGATTACATCTGTGAGCCACCCTGCCC < 41bp 0.86939087368258 0.610950610718341 0.34017277 0.28640944 prediction 0.516880525928479 Functional Loss - SNHG3 ENSG00000242125 ncRNA_exonic Human sense_intronic chr1:28836026 chr1:28836028 . . 0 23 hm5C_associated_SNPs_62688 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:28835953-28836077
64251 chr15 67073658 67073658 1 + G T PRAD 67073655 + 67073635 67073675 41 ACGCGCCCGGCGGCCGCGCCCTGGTCGTGCGCAAGGTGCCC ACGCGCCCGGCGGCCGCGCCCTGTTCGTGCGCAAGGTGCCC < 41bp 0.758436169434105 0.37531488049177 0.11694968 0.03640881 prediction 0.516872338868209 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073655 chr15:67073658 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_62689 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:67073658-67073659
64251 chr5 72383470 72383470 1 + C T LUAD 72383468 + 72383448 72383488 41 TCAGAAGGACCTAGTAAACCCACGACACTTGCAGTACAATT TCAGAAGGACCTAGTAAACCCATGACACTTGCAGTACAATT < 41bp 0.801003187894566 0.54257265035089 0.016959518 0.012858063 prediction 0.51686107508735 Functional Loss - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72383468 chr5:72383470 nonsynonymous SNV 0.532 0 23 hm5C_associated_SNPs_62692 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:72383444-72383484
64251 chr3 129221700 129221700 1 + A T SKCM 129221696 + 129221676 129221716 41 ACCTCAAGTCCCTGGTGCAGCTGCACGTGGAGACCCAGCGC ACCTCAAGTCCCTGGTGCAGCTGCTCGTGGAGACCCAGCGC < 41bp 0.857033761299612 0.598617210565557 0.44230092 0.19427353 prediction 0.516833101468109 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129221696 chr3:129221700 nonsynonymous SNV 0.894 1 25 hm5C_associated_SNPs_62696 0 0 1 PPIG POSTAR2 ENCODE chr3:129221661-129221746
64251 chr1 29609253 29609253 1 + A T LUSC 29609249 + 29609229 29609269 41 TGCGGCGGGAGCCAGGTGGACAGGACTGCTTCCCAGTGCCA TGCGGCGGGAGCCAGGTGGACAGGTCTGCTTCCCAGTGCCA < 41bp 0.84319442211154 0.584778661510567 0.8962363 0.87036145 prediction 0.516831521201946 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29609249 chr1:29609253 nonsynonymous SNV 0.982 2 25 hm5C_associated_SNPs_62697 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:29609200-29609255
64251 chr18 29118843 29118843 1 + T C rs199681901 29118842 + 29118822 29118862 41 CACTCACAGTTTGTGAGTGTCTGCATGGCAGCGGCTGCAGG CACTCACAGTTTGTGAGTGTCCGCATGGCAGCGGCTGCAGG < 41bp 0.780819548201524 0.522416272649323 0.9107609 0.38302714 prediction 0.516806551104401 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29118842 chr18:29118843 nonsynonymous SNV 0.789 0 22 hm5C_associated_SNPs_62702 3 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr18:29118830-29118858
64251 chr19 47423452 47423452 1 + A T LAML 47423448 + 47423428 47423468 41 ATTCAGAATTGTTTTATGAACTGGAGCTGGATGCTAAGCCC ATTCAGAATTGTTTTATGAACTGGTGCTGGATGCTAAGCCC < 41bp 0.758402611808666 0.446329818974304 0.33027485 0.18586019 prediction 0.516805223617332 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47423448 chr19:47423452 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_62703 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:47423434-47423460
64251 chr16 23681963 23681963 1 + G T rs8052299 23681960 + 23681940 23681980 41 GTCTCCTGGGGGTTAGCTTCCATGGAGCTGCAAGTCCCCTG GTCTCCTGGGGGTTAGCTTCCATTGAGCTGCAAGTCCCCTG < 41bp 0.758400797735161 0.408941600298091 0.7891425 0.36644346 prediction 0.516801595470323 Functional Loss - DCTN5 ENSG00000260482 ncRNA_exonic Human 3prime_overlapping_ncRNA chr16:23681960 chr16:23681963 . . 0 24 hm5C_associated_SNPs_62704 0 0 1 HNRNPM POSTAR2 ENCODE chr16:23681927-23681982
64251 chr16 77228297 77228297 1 + C T CESC 77228295 + 77228275 77228315 41 CGTGGCCATGTCACGGACTTCTCAGTCAGCAGCCCAGCTGC CGTGGCCATGTCACGGACTTCTTAGTCAGCAGCCCAGCTGC < 41bp 0.758397558948464 0.492380980372972 0.22294831 0.07467729 prediction 0.516795117896928 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228295 chr16:77228297 stopgain 0.992 1 23 hm5C_associated_SNPs_62708 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:77228274-77228312
64251 chr11 63743745 63743745 1 + G T UCEC 63743743 + 63743723 63743763 41 CTTCGTGACCTTCCTCCTGCCAGCGGGCTGGATCCTGTCAC CTTCGTGACCTTCCTCCTGCCATCGGGCTGGATCCTGTCAC < 41bp 0.876666865665547 0.618285197572506 0.8705032 0.2759382 prediction 0.516763336186083 Functional Loss - COX8A ENSG00000176340 CDS Human protein_coding chr11:63743743 chr11:63743745 nonsynonymous SNV 0.504 0 23 hm5C_associated_SNPs_62709 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr17 40720956 40720956 1 + A T COAD 40720952 + 40720932 40720972 41 GCTGAGCAGAAGAGGAGGGACGCCATCAAGGTGAACAGGGA GCTGAGCAGAAGAGGAGGGACGCCTTCAAGGTGAACAGGGA < 41bp 0.879201339730129 0.620839375534011 0.684097 0.47478262 prediction 0.516723928392236 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40720952 chr17:40720956 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_62711 0 0 2 PRPF8 POSTAR2 ENCODE chr17:40720947-40720998
64251 chr5 115469813 115469813 1 + C T SKCM 115469811 + 115469791 115469831 41 CCTTCAGATGGCTCACTCTGCTCAAGCAAAACTAAAATCTC CCTTCAGATGGCTCACTCTGCTTAAGCAAAACTAAAATCTC < 41bp 0.80260203229152 0.544250837234039 0.044228613 0.019066513 prediction 0.516702390114962 Functional Loss - COMMD10 ENSG00000145781 CDS Human protein_coding chr5:115469811 chr5:115469813 stopgain 0.999 1 23 hm5C_associated_SNPs_62712 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr5:115469800-115469820
64251 chr19 50881460 50881460 1 + C T SKCM 50881458 + 50881438 50881478 41 AAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTGGGCCACGA AAGCGAAAGAAGGGCCCAGCCCTGAAGATGCTGGGCCACGA < 41bp 0.767574143199235 0.509242002565012 0.42572486 0.40789878 prediction 0.516664281268445 Functional Loss - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881458 chr19:50881460 nonsynonymous SNV 0.192 3 23 hm5C_associated_SNPs_62716 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:50881459-50881460
64251 chr7 92015842 92015842 1 + G T LUAD 92015840 + 92015820 92015860 41 AAGTGCAAGTATGACTTTTGCTGGATTTGCCTTGAAGAGTG AAGTGCAAGTATGACTTTTGCTTGATTTGCCTTGAAGAGTG < 41bp 0.860663973262895 0.602334750034542 0.38209343 0.07324666 prediction 0.516658446456705 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92015840 chr7:92015842 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_62717 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:92015828-92015856
64251 chr2 239234519 239234519 1 + C T LUAD 239234517 + 239234497 239234537 41 TGTAATGGTGTCGGGAGAGCCACTGTTGGCCAAACCAGCCC TGTAATGGTGTCGGGAGAGCCATTGTTGGCCAAACCAGCCC < 41bp 0.758322897277658 0.49038994244385 0.51256996 0.53981394 prediction 0.516645794555316 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239234517 chr2:239234519 synonymous SNV . 0 23 hm5C_associated_SNPs_62719 0 0 1 GRWD1 POSTAR2 ENCODE chr2:239234461-239234544
64251 chr17 79671373 79671373 1 + G T LUSC 79671370 + 79671350 79671390 41 GCACCCCTGGATAACGCCCCCAAGGAGTACCCCCCCAAGAT GCACCCCTGGATAACGCCCCCAATGAGTACCCCCCCAAGAT < 41bp 0.75831943791682 0.351632933611394 0.4865538 0.056225628 prediction 0.51663887583364 Functional Loss - MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671370 chr17:79671373 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_62722 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79671360-79671380
64251 chr9 133760330 133760330 1 + C T LGG 133760328 + 133760308 133760348 41 GCACAAGCACTCCTCTGAGTCGCCAGGGAGGGACAAGGGGA GCACAAGCACTCCTCTGAGTCGTCAGGGAGGGACAAGGGGA < 41bp 0.792109960144688 0.533803720735842 0.64631176 0.47775692 prediction 0.516612478817691 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760328 chr9:133760330 nonsynonymous SNV 0.848 1 23 hm5C_associated_SNPs_62724 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:133760314-133760352
64251 chr3 12610495 12610495 1 + C T CESC 12610493 + 12610473 12610513 41 GGGCTACTGTGCCTATGGAACTCGGTGCAGGCAAGGACTCT GGGCTACTGTGCCTATGGAACTTGGTGCAGGCAAGGACTCT < 41bp 0.758301517222254 0.497436379833021 0.058304787 0.059151858 prediction 0.516603034444508 Functional Loss - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12610493 chr3:12610495 stopgain 0.653 4 23 hm5C_associated_SNPs_62725 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:12610470-12610502
64251 chr19 49513277 49513277 1 + G C SARC 49513273 + 49513253 49513293 41 CGACGGGCAAGATCTCCAAGCTGGGCCGCTCCTTCACACGC CGACGGGCAAGATCTCCAAGCTGGCCCGCTCCTTCACACGC < 41bp 0.823594337227665 0.565298783912653 0.28870112 0.09379223 prediction 0.516591106630024 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49513273 chr19:49513277 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_62726 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:49513260-49513280
64251 chr20 43043184 43043184 1 + G C BLCA 43043183 + 43043163 43043203 41 CCGGGATCAACGGCGACATTCGGGCGAAGAAGATTGCCAGC CCGGGATCAACGGCGACATTCCGGCGAAGAAGATTGCCAGC < 41bp 0.7582803775756 0.433846469709904 0.9489695 0.9200377 prediction 0.516560755151199 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43043183 chr20:43043184 nonsynonymous SNV 0.911 2 22 hm5C_associated_SNPs_62728 0 0 2 PPIG POSTAR2 ENCODE chr20:43043156-43043265
64251 chr1 171761218 171761218 1 + C T rs2232823 171761216 + 171761196 171761236 41 GCAGCCTCCCCCTCTTTGTCCACGATCATTTTCCAAAGTCC GCAGCCTCCCCCTCTTTGTCCATGATCATTTTCCAAAGTCC < 41bp 0.798640113506852 0.540364533280953 0.25250477 0.27062106 prediction 0.516551160451797 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171761216 chr1:171761218 synonymous SNV . 0 23 hm5C_associated_SNPs_62729 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:171761213-171761233
64251 chr3 169706098 169706098 1 + C T BLCA 169706096 + 169706076 169706116 41 TGAGAGTAGGTGTTTATTACCTCAGTGTGGGTGCAGGCTGT TGAGAGTAGGTGTTTATTACCTTAGTGTGGGTGCAGGCTGT < 41bp 0.797618779895614 0.539352486570258 0.25794464 0.18818685 prediction 0.516532586650711 Functional Loss - SEC62 ENSG00000008952 CDS Human protein_coding chr3:169706096 chr3:169706098 synonymous SNV . 0 23 hm5C_associated_SNPs_62733 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr3:169706036-169706125
64251 chr1 218458684 218458684 1 + G T LUSC 218458681 + 218458661 218458701 41 GGCAGCCGCCGCTCCGGACTCACGTGTGAGTGAGGAAGAAA GGCAGCCGCCGCTCCGGACTCACTTGTGAGTGAGGAAGAAA < 41bp 0.758257481632125 0.40397567158753 0.43623605 0.07304287 prediction 0.516514963264251 Functional Loss - RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458681 chr1:218458684 nonsynonymous SNV 0.783 1 24 hm5C_associated_SNPs_62736 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr1:218458658-218458698
64251 chr16 27325264 27325264 1 + G C rs35583025 27325263 + 27325243 27325283 41 CAGGAAAGCCCCGCGCGGCGCGGGCCAGGGAAGGGCCACCC CAGGAAAGCCCCGCGCGGCGCCGGCCAGGGAAGGGCCACCC < 41bp 0.82629024266324 0.568037037822506 0.647768 0.46800718 prediction 0.516506409681469 Functional Loss - IL4R ENSG00000077238 UTR5 Human protein_coding chr16:27325263 chr16:27325264 . . 0 22 hm5C_associated_SNPs_62737 0 0 4 CSTF2T POSTAR2 ENCODE chr16:27325206-27325267
64251 chr7 128494262 128494262 1 + A C LUAD 128494258 + 128494238 128494278 41 GATCCTTCGGCAGCATCACCCGGCAGCAGGAGGGTGAGCAC GATCCTTCGGCAGCATCACCCGGCCGCAGGAGGGTGAGCAC < 41bp 0.758251910209828 0.374511615295218 0.8669621 0.772382 prediction 0.516503820419655 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128494258 chr7:128494262 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_62738 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:128494232-128494264
64251 chr15 90772512 90772512 1 + A C rs538616139 90772508 + 90772488 90772528 41 CCTGGGCTCGGACCCAACTCCTGGACCTTTCCAGCCTGTAT CCTGGGCTCGGACCCAACTCCTGGCCCTTTCCAGCCTGTAT < 41bp 0.902497288421274 0.644248869369837 0.20100126 0.4759977 prediction 0.516496838102875 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90772508 chr15:90772512 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_62739 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr15:90772493-90772521
64251 chr2 99976953 99976953 1 + G T UCEC 99976950 + 99976930 99976970 41 AAGATGATATCCTGAAAGAACTGGAAGAATTGTCTTTGGAA AAGATGATATCCTGAAAGAACTGTAAGAATTGTCTTTGGAA < 41bp 0.758247993949727 0.398440401383323 0.13377324 0.07310417 prediction 0.516495987899454 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99976950 chr2:99976953 stopgain 1.000 0 24 hm5C_associated_SNPs_62740 0 0 22 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:99976931-99976958
64251 chr17 47004417 47004417 1 + A T SKCM 47004413 + 47004393 47004433 41 GTCAGAAAGTGCTGGAGAGGCTCCATAATGAGAATGCAGAA GTCAGAAAGTGCTGGAGAGGCTCCTTAATGAGAATGCAGAA < 41bp 0.86992140040447 0.61168401488498 0.90330446 0.059365213 prediction 0.51647477103898 Functional Loss - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004413 chr17:47004417 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_62742 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47004370-47004485
64251 chr10 103292777 103292777 1 + C T SKCM 103292775 + 103292755 103292795 41 ATACAGGTTCAGTCCTCTGTCTCCAGTATGATGAGAGAGTG ATACAGGTTCAGTCCTCTGTCTTCAGTATGATGAGAGAGTG < 41bp 0.842265548922759 0.584039583113939 0.9194063 0.20079601 prediction 0.516451931617638 Functional Loss - BTRC ENSG00000166167 CDS Human protein_coding chr10:103292775 chr10:103292777 synonymous SNV . 0 23 hm5C_associated_SNPs_62743 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:103292749-103292780
64251 chr19 30312702 30312702 1 + C T SKCM 30312700 + 30312680 30312720 41 TGTTCAGGAGATGAAATTCTCACCATGGAATTAATGATTAT TGTTCAGGAGATGAAATTCTCATCATGGAATTAATGATTAT < 41bp 0.789151186935648 0.530946309587065 0.18018216 0.10511434 prediction 0.516409754697167 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30312700 chr19:30312702 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_62745 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:30312662-30312702
64251 chr3 49213186 49213186 1 + G T STAD 49213183 + 49213163 49213203 41 TTTGTTATTGGGGGTGTGGCCCAGGGCCCCAGTCAAGCCGT TTTGTTATTGGGGGTGTGGCCCATGGCCCCAGTCAAGCCGT < 41bp 0.758180228943716 0.375677693849905 0.91092694 0.8432369 prediction 0.516360457887431 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49213183 chr3:49213186 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62750 0 0 4 HNRNPM POSTAR2 ENCODE chr3:49213171-49213260
64251 chr7 127230153 127230153 1 + G T OV 127230150 + 127230130 127230170 41 TTGTGGTGGACAGTAATGACCGGGAGCGGGTCCAAGAATCT TTGTGGTGGACAGTAATGACCGGTAGCGGGTCCAAGAATCT < 41bp 0.91496859476167 0.656792979672788 0.40655392 0.062831044 prediction 0.516351230177764 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127230150 chr7:127230153 stopgain 1.000 1 24 hm5C_associated_SNPs_62751 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:127230128-127230155
64251 chr21 34923567 34923567 1 + C T LGG 34923565 + 34923545 34923585 41 TCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGCTGGAATC TCGCAGTCCCTGGAGGTGCCCTTGACGACAGCGCTGGAATC < 41bp 0.758172229436171 0.487013430269091 0.47328877 0.21814156 prediction 0.516344458872342 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34923565 chr21:34923567 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_62753 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34923320-34923604
64251 chr1 57378102 57378102 1 + G T LUAD 57378100 + 57378080 57378120 41 AGCCTATCCACGAGGTGCTGCGGCACACAAGCCTGGGGCCT AGCCTATCCACGAGGTGCTGCGTCACACAAGCCTGGGGCCT < 41bp 0.75817177871085 0.40775479405483 0.9091991 0.54580003 prediction 0.516343557421701 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57378100 chr1:57378102 synonymous SNV . 0 23 hm5C_associated_SNPs_62755 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr16 81040245 81040245 1 + G C rs71400132 81040244 + 81040224 81040264 41 TCCCCACCTCCTGGGGCCGACGGGCGGCAGGAAGGGGCTCG TCCCCACCTCCTGGGGCCGACCGGCGGCAGGAAGGGGCTCG < 41bp 0.758170406640911 0.457472342485467 0.83221364 0.8926097 prediction 0.516340813281822 Functional Loss - CENPN ENSG00000166451 UTR5 Human protein_coding chr16:81040244 chr16:81040245 . . 0 22 hm5C_associated_SNPs_62756 0 0 1 DDX3X POSTAR2 ENCODE chr16:81040192-81040271
64251 chr19 10368928 10368928 1 + C T UCEC 10368926 + 10368906 10368946 41 GCCCATGGCCCCCGGGGCCCCACAAGTTACTACTACATGCT GCCCATGGCCCCCGGGGCCCCATAAGTTACTACTACATGCT < 41bp 0.7854410915901 0.527272410461528 0.5931123 0.24232692 prediction 0.516337362257143 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10368926 chr19:10368928 stopgain 0.975 2 23 hm5C_associated_SNPs_62758 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10368919-10368978
64251 chr10 104158521 104158521 1 + G T GBM 104158519 + 104158499 104158539 41 AGGAAGAGGTGCAGCGGAAGCGGAGGAAGGCCTTGCCCACC AGGAAGAGGTGCAGCGGAAGCGTAGGAAGGCCTTGCCCACC < 41bp 0.889803350216688 0.631643059571497 0.91457343 0.8159896 prediction 0.516320581290382 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104158519 chr10:104158521 synonymous SNV . 0 23 hm5C_associated_SNPs_62760 0 0 1 PPIG POSTAR2 ENCODE chr10:104158507-104158616
64251 chr17 79941448 79941448 1 + C T BLCA 79941446 + 79941426 79941466 41 GCAGGTTTCAGAGGAGCGTGCTCGACCTTTCTCTCCAGTGG GCAGGTTTCAGAGGAGCGTGCTTGACCTTTCTCTCCAGTGG < 41bp 0.765382708212726 0.507232583573507 0.31238133 0.29909885 prediction 0.516300249278439 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79941446 chr17:79941448 synonymous SNV . 0 23 hm5C_associated_SNPs_62765 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:79941441-79941463
64251 chr1 32503572 32503572 1 + C T HNSC 32503570 + 32503550 32503590 41 GGGTGCTCCAGCACCAAGAGCACGGACAGCGGGCATCCAGA GGGTGCTCCAGCACCAAGAGCATGGACAGCGGGCATCCAGA < 41bp 0.758127477530445 0.496148394751162 0.19907165 0.17764372 prediction 0.51625495506089 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32503570 chr1:32503572 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_62770 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:32503550-32503578
64251 chr4 187130377 187130377 1 + C T BLCA 187130375 + 187130355 187130395 41 TCCCCGAGAATGCACAAGGGCGCCATCCATATGCCTACGTG TCCCCGAGAATGCACAAGGGCGTCATCCATATGCCTACGTG < 41bp 0.758121444230302 0.476196390253018 0.078385055 0.13146412 prediction 0.516242888460605 Functional Loss - CYP4V2 ENSG00000145476;ENSG00000164344 CDS Human other chr4:187130375 chr4:187130377 synonymous SNV . 0 23 hm5C_associated_SNPs_62772 0 0 1 GRWD1 POSTAR2 ENCODE chr4:187130325-187130431
64251 chr20 31024758 31024758 1 + C T COAD 31024756 + 31024736 31024776 41 CTTGCCCTTCTGGAAATTACCCCGAGAGCCAGGGAAGGGGC CTTGCCCTTCTGGAAATTACCCTGAGAGCCAGGGAAGGGGC < 41bp 0.781747334366629 0.523629384524282 0.043395072 0.034078747 prediction 0.516235899684694 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31024756 chr20:31024758 stopgain 0.984 0 23 hm5C_associated_SNPs_62774 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:31024740-31024760
64251 chr3 185316310 185316310 1 + C T LUSC 185316308 + 185316288 185316328 41 AACTTCTGCTTGTAATGGAACACGGAATGTGGCCCCTTCAG AACTTCTGCTTGTAATGGAACATGGAATGTGGCCCCTTCAG < 41bp 0.778152541601684 0.520045574998458 0.14189169 0.1541197 prediction 0.516213933206452 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185316308 chr3:185316310 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_62778 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:185316305-185316328
64251 chr4 96073882 96073882 1 + G T UCEC 96073879 + 96073859 96073899 41 ATGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTCATT ATGAGGGAGATTGTGTGCATCAATAAGTTACGCCCCTCATT < 41bp 0.758105506559811 0.403248565029152 0.19411531 0.02756381 prediction 0.516211013119623 Functional Loss - BMPR1B ENSG00000138696 CDS Human protein_coding chr4:96073879 chr4:96073882 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_62779 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:96073861-96073882
64251 chr12 120876032 120876032 1 + G T COAD 120876030 + 120876010 120876050 41 CGCCCATGGCGAAGAGGGCTCAGGTACTGGGGCCGGGGTCG CGCCCATGGCGAAGAGGGCTCATGTACTGGGGCCGGGGTCG < 41bp 0.887854601191971 0.629749903727313 0.41583812 0.24364638 prediction 0.516209394929316 Functional Loss - COX6A1 ENSG00000111775;ENSG00000111780 CDS Human other chr12:120876030 chr12:120876032 nonsynonymous SNV 0.984 1 23 hm5C_associated_SNPs_62780 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:120876001-120876032
64251 chrX 19369486 19369486 1 + C T COAD 19369484 + 19369464 19369504 41 GGCTCACGGCTTTACTTTCACCCGGGGCCTTTCCGTCCGAG GGCTCACGGCTTTACTTTCACCTGGGGCCTTTCCGTCCGAG < 41bp 0.766929349699994 0.508825749806515 0.23546809 0.51574844 prediction 0.516207199786958 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19369484 chrX:19369486 nonsynonymous SNV 0.972 4 23 hm5C_associated_SNPs_62781 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:19369450-19369505
64251 chr5 34803869 34803869 1 + G T PAAD 34803866 + 34803846 34803886 41 AACAGCCACCATGAATGCATCAGGAAGCTGCTTCAGGTAAG AACAGCCACCATGAATGCATCAGTAAGCTGCTTCAGGTAAG < 41bp 0.758094660425777 0.377040214888913 0.61708397 0.23191896 prediction 0.516189320851553 Functional Loss - RAI14 ENSG00000039560 CDS Human protein_coding chr5:34803866 chr5:34803869 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_62782 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:34803842-34803880
64251 chr11 118403804 118403804 1 + G T UCEC 118403802 + 118403782 118403822 41 ACTTCCTGGTGCTGGATGCGCAGAACTACCCCTGGCTCACC ACTTCCTGGTGCTGGATGCGCATAACTACCCCTGGCTCACC < 41bp 0.880728498686079 0.622635361810654 0.7375056 0.23564252 prediction 0.51618627375085 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118403802 chr11:118403804 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_62784 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:118403771-118403819
64251 chr9 35675784 35675784 1 + C T UCEC 35675782 + 35675762 35675802 41 CCCGCCCTGGCCCCGGGTGTCCCCAGCCTGCGCGGGCCGCT CCCGCCCTGGCCCCGGGTGTCCTCAGCCTGCGCGGGCCGCT < 41bp 0.788774189029488 0.530688833405094 0.31130573 0.21543571 prediction 0.516170711248788 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675782 chr9:35675784 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_62786 0 0 1 RPS3 POSTAR2 ENCODE chr9:35675757-35675885
64251 chr21 47918594 47918594 1 + A T STAD 47918590 + 47918570 47918610 41 ATTCCAGCGTCGAGCCCTGGCTCGACCGGGTCATTCAGGGC ATTCCAGCGTCGAGCCCTGGCTCGTCCGGGTCATTCAGGGC < 41bp 0.758075326758743 0.432255763503315 0.029890597 0.06505531 prediction 0.516150653517486 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47918590 chr21:47918594 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_62790 0 0 1 DDX24 POSTAR2 ENCODE chr21:47918582-47918747
64251 chr1 46083226 46083226 1 + C T rs72883665 46083224 + 46083204 46083244 41 GGAGGCAGTGGGGATGCTGTCCCCAGTGGAAATGAAGTTTC GGAGGCAGTGGGGATGCTGTCCTCAGTGGAAATGAAGTTTC < 41bp 0.758042821947627 0.493644507479368 0.11713293 0.059145957 prediction 0.516085643895254 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46083224 chr1:46083226 nonsynonymous SNV 0.976 0 23 hm5C_associated_SNPs_62797 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:46083212-46083243
64251 chr17 4685856 4685856 1 + C T CESC 4685854 + 4685834 4685874 41 CTTGGTGCCATCTACTGCCTCTCGGTGTCTGGAGCTGGGCT CTTGGTGCCATCTACTGCCTCTTGGTGTCTGGAGCTGGGCT < 41bp 0.758042590999846 0.496865364489188 0.20512891 0.37330467 prediction 0.516085181999693 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4685854 chr17:4685856 nonsynonymous SNV 0.956 0 23 hm5C_associated_SNPs_62798 0 0 3 PPIG POSTAR2 ENCODE chr17:4685845-4685884
64251 chr19 16980287 16980287 1 + C T CESC 16980285 + 16980265 16980305 41 CCACAGCACCAGGAGCAGCACTCGGAGGGCCGCAGTGCCCC CCACAGCACCAGGAGCAGCACTTGGAGGGCCGCAGTGCCCC < 41bp 0.758036290463837 0.490363912290162 0.22673175 0.29097158 prediction 0.516072580927673 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16980285 chr19:16980287 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_62799 0 0 5 BUD13 POSTAR2 ENCODE chr19:16980264-16980299
64251 chr15 91493753 91493753 1 + C T SKCM 91493751 + 91493731 91493771 41 TCTATGAGGTGGTCCGGCCCCTCGTCTCCCTGTTGCACCTC TCTATGAGGTGGTCCGGCCCCTTGTCTCCCTGTTGCACCTC < 41bp 0.758033849670115 0.477512949278182 0.01042971 0.007415116 prediction 0.516067699340229 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91493751 chr15:91493753 synonymous SNV . 0 23 hm5C_associated_SNPs_62800 0 0 3 BUD13 POSTAR2 ENCODE chr15:91493689-91493791
64251 chr3 45637341 45637341 1 + G T UCEC 45637339 + 45637319 45637359 41 GGGGCTGGGGGGTGAGGTTTCAGGTGTGATGTCCAAACCCA GGGGCTGGGGGGTGAGGTTTCATGTGTGATGTCCAAACCCA < 41bp 0.883980424441738 0.625953143942054 0.9002327 0.43927214 prediction 0.516054560999369 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637339 chr3:45637341 nonsynonymous SNV 0.116 2 23 hm5C_associated_SNPs_62801 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:45637312-45637341
64251 chr19 7677174 7677174 1 + G C BLCA 7677170 + 7677150 7677190 41 GCCCCGCCGGAGGCCCTGAGCTCGGAGATGAGTGAGCTCAG GCCCCGCCGGAGGCCCTGAGCTCGCAGATGAGTGAGCTCAG < 41bp 0.817056693913116 0.559039010927276 0.17676342 0.13543025 prediction 0.516035365971679 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677170 chr19:7677174 nonsynonymous SNV 0.971 2 25 hm5C_associated_SNPs_62803 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7677155-7677192
64251 chr14 93684979 93684979 1 + C T SKCM 93684977 + 93684957 93684997 41 GAGAGCATCAAGATAGTACCCTCAAAGAGGATGTTCCAGAA GAGAGCATCAAGATAGTACCCTTAAAGAGGATGTTCCAGAA < 41bp 0.831431774031439 0.573418278075037 0.22681165 0.14013165 prediction 0.516026991912804 Functional Loss - UBR7 ENSG00000012963 CDS Human protein_coding chr14:93684977 chr14:93684979 synonymous SNV . 0 23 hm5C_associated_SNPs_62805 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:93684945-93684980
64251 chr1 233807173 233807173 1 + C T BLCA 233807171 + 233807151 233807191 41 CATGACCAACTGTCCTTCTCCTCGATCACAGACCAGGCAGC CATGACCAACTGTCCTTCTCCTTGATCACAGACCAGGCAGC < 41bp 0.800298472871169 0.542285282045561 0.26373115 0.09231827 prediction 0.516026381651215 Functional Loss - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807171 chr1:233807173 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_62806 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:233807144-233807179
64251 chr1 161127458 161127458 1 + G T LUAD 161127455 + 161127435 161127475 41 CAGAAATTGCAGTTCCTGAGCTGGATGGAAAGACAGCAAAG CAGAAATTGCAGTTCCTGAGCTGTATGGAAAGACAGCAAAG < 41bp 0.908694773267918 0.650685223638784 0.17869282 0.08095303 prediction 0.516019099258269 Functional Loss - UFC1 ENSG00000143222 CDS Human protein_coding chr1:161127455 chr1:161127458 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_62808 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:161127435-161127475
64251 chr15 44092767 44092767 1 + G T UCEC 44092765 + 44092745 44092785 41 TCCCCGGGCGGAAGCTGTGTCAGTTGCCGGAAGTCGGCGTG TCCCCGGGCGGAAGCTGTGTCATTTGCCGGAAGTCGGCGTG < 41bp 0.758700463104651 0.500694025312136 0.6943279 0.31053936 prediction 0.516012875585029 Functional Loss - SERF2-C15ORF63 ENSG00000140264 CDS Human protein_coding chr15:44092765 chr15:44092767 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_62810 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:44092760-44092780
64251 chr22 31661949 31661949 1 + C T SKCM 31661947 + 31661927 31661967 41 TTCAGGCGCAGTAACAGTATCTCCAAGTCCCCTGGCCCCAG TTCAGGCGCAGTAACAGTATCTTCAAGTCCCCTGGCCCCAG < 41bp 0.833813700081432 0.575820136638322 0.9700103 0.39459592 prediction 0.51598712688622 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31661947 chr22:31661949 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_62812 0 0 1 GRWD1 POSTAR2 ENCODE chr22:31661936-31662000
64251 chr19 7711219 7711219 1 + G C GBM 7711215 + 7711195 7711235 41 TCCCGCTGGACCCCGGTCATCAAGGATGTAATGGAGGTACT TCCCGCTGGACCCCGGTCATCAAGCATGTAATGGAGGTACT < 41bp 0.813162038492823 0.55517865807432 0.8995801 0.36610135 prediction 0.515966760837005 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711215 chr19:7711219 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_62814 0 0 2 PPIG POSTAR2 ENCODE chr19:7711211-7711231
64251 chr1 43166659 43166659 1 + C T LUSC 43166657 + 43166637 43166677 41 CAGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGG CAGCTGAGAATTCGTCCGCTCCTGAGGCTGAGCAGGGCGGG < 41bp 0.796475734923786 0.53849905356673 0.5657759 0.3605681 prediction 0.515953362714113 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43166657 chr1:43166659 synonymous SNV . 0 23 hm5C_associated_SNPs_62816 0 0 37 UPF1 POSTAR2 GSE69586,GSM1704216 chr1:43166620-43166660
64251 chr17 73809265 73809265 1 + G T SARC 73809263 + 73809243 73809283 41 ACTACCACAACAGCAAGGACCGGCGGCGGAGCCCCCGGAAG ACTACCACAACAGCAAGGACCGTCGGCGGAGCCCCCGGAAG < 41bp 0.757969874911394 0.397487098788844 0.7630626 0.28562337 prediction 0.515939749822788 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73809263 chr17:73809265 synonymous SNV . 0 23 hm5C_associated_SNPs_62817 0 0 1 PPIG POSTAR2 ENCODE chr17:73809259-73809278
64251 chr3 158519926 158519926 1 + G C rs577490116 158519922 + 158519902 158519942 41 AGTTGTCACCACTTTCCCCTCTCCGTCTCCTGCGGGCGCAA AGTTGTCACCACTTTCCCCTCTCCCTCTCCTGCGGGCGCAA < 41bp 0.799637687326408 0.541682016756714 0.10169712 0.3675148 prediction 0.515911341139388 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519922 chr3:158519926 synonymous SNV . 0 25 hm5C_associated_SNPs_62821 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr1 182828207 182828207 1 + G T STAD 182828204 + 182828184 182828224 41 GAGCAAATAAGCATGGACCTCAAGAATGAATTGATGTACCA GAGCAAATAAGCATGGACCTCAATAATGAATTGATGTACCA < 41bp 0.757917609327299 0.38271167561143 0.1800057 0.20731732 prediction 0.515835218654598 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182828204 chr1:182828207 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_62832 0 0 26 FMR1 POSTAR2 GSE39682,GSM977615 chr1:182828176-182828241
64251 chr20 61453155 61453155 1 + G C UCEC 61453151 + 61453131 61453171 41 CCCCAGGTGGGATCGGCCTCCGCGGCCCCCCGGTGAGTGGC CCCCAGGTGGGATCGGCCTCCGCGCCCCCCCGGTGAGTGGC < 41bp 0.805754679304862 0.5478453264149 0.88961816 0.8330183 prediction 0.515818705779924 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61453151 chr20:61453155 nonsynonymous SNV 0.892 2 25 hm5C_associated_SNPs_62833 0 0 7 BUD13 POSTAR2 ENCODE chr20:61453145-61453160
64251 chr5 65054608 65054608 1 + G C BLCA 65054607 + 65054587 65054627 41 GGTATTGAGGAAGTAACTTACGAGAACTGTCTGCAGGCACT GGTATTGAGGAAGTAACTTACCAGAACTGTCTGCAGGCACT < 41bp 0.757896617248127 0.468062008571542 0.8896871 0.5145788 prediction 0.515793234496254 Functional Loss - NLN ENSG00000123213 CDS Human protein_coding chr5:65054607 chr5:65054608 nonsynonymous SNV 0.920 4 22 hm5C_associated_SNPs_62835 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65054573-65054616
64251 chr14 45605509 45605509 1 + G C HNSC 45605508 + 45605488 45605528 41 ACCCTACCAATTGCCCAGTGCGGGACTACCAGCTGCACATT ACCCTACCAATTGCCCAGTGCCGGACTACCAGCTGCACATT < 41bp 0.848747051412616 0.590874228239772 0.92122126 0.81022644 prediction 0.515745646345688 Functional Loss - FANCM ENSG00000187790 CDS Human protein_coding chr14:45605508 chr14:45605509 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_62839 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:45605500-45605522
64251 chr14 70459158 70459158 1 + C T UCEC 70459156 + 70459136 70459176 41 GACGGGTCTAAGCCGACACCCACGATGGAGACCCAGCCGGT GACGGGTCTAAGCCGACACCCATGATGGAGACCCAGCCGGT < 41bp 0.80920477989028 0.551346790295286 0.20821229 0.28748974 prediction 0.515715979189986 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70459156 chr14:70459158 nonsynonymous SNV 0.972 4 23 hm5C_associated_SNPs_62840 0 0 1 BUD13 POSTAR2 ENCODE chr14:70459118-70459198
64251 chr11 70194497 70194497 1 + G T BLCA 70194494 + 70194474 70194514 41 GGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGC GGATCCCTCACAGCCCAGCTCGGTAAGTGGACAGACTGGGC < 41bp 0.909653027218472 0.651796156436377 0.93425643 0.3507002 prediction 0.515713741564189 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70194494 chr11:70194497 stopgain 0.991 1 24 hm5C_associated_SNPs_62841 0 0 1 FXR2 POSTAR2 ENCODE chr11:70194392-70194521
64251 chr11 34938244 34938244 1 + G T SARC 34938242 + 34938222 34938262 41 TGGGCTGTGATCCGCGGCTGCTGCGTTATCTTGTGGGCTTC TGGGCTGTGATCCGCGGCTGCTTCGTTATCTTGTGGGCTTC < 41bp 0.881382089245113 0.62353920167508 0.72009784 0.30121773 prediction 0.515685775140067 Functional Loss - PDHX ENSG00000110435 CDS Human protein_coding chr11:34938242 chr11:34938244 synonymous SNV . 0 23 hm5C_associated_SNPs_62844 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:34938202-34938247
64251 chr5 80604490 80604490 1 + C T LGG 80604488 + 80604468 80604508 41 ACAGGTGTGGGTCCACAGAGCACGAAATAACCAAGTGTAAG ACAGGTGTGGGTCCACAGAGCATGAAATAACCAAGTGTAAG < 41bp 0.757832319922572 0.494343424490558 0.14442152 0.1786991 prediction 0.515664639845145 Functional Loss - ZCCHC9 ENSG00000131732 CDS Human protein_coding chr5:80604488 chr5:80604490 synonymous SNV . 0 23 hm5C_associated_SNPs_62846 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:80604443-80604491
64251 chr16 2577615 2577615 1 + C T COAD 2577613 + 2577593 2577633 41 GTCCCCATGGGGCAGGGGTCCTCGGTGAGTGGCTGACCTCC GTCCCCATGGGGCAGGGGTCCTTGGTGAGTGGCTGACCTCC < 41bp 0.764508425892413 0.50668344517512 0.870064 0.69977707 prediction 0.515649961434586 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577613 chr16:2577615 synonymous SNV . 0 23 hm5C_associated_SNPs_62851 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:2577598-2577634
64251 chr17 74382142 74382142 1 + G T UCEC 74382139 + 74382119 74382159 41 AACCCGCGCGGCGGCAAGGGCAAGGCCTTGCAGCTCTTCCG AACCCGCGCGGCGGCAAGGGCAATGCCTTGCAGCTCTTCCG < 41bp 0.75781844345368 0.481426327725686 0.76501334 0.2443563 prediction 0.51563688690736 Functional Loss - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382139 chr17:74382142 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_62854 0 0 1 DDX3X POSTAR2 ENCODE chr17:74382095-74382183
64251 chr7 107399357 107399357 1 + C T STAD 107399355 + 107399335 107399375 41 ACCTTATATGAATCATCCTCCTCCAGGACCTCCCCCACCTC ACCTTATATGAATCATCCTCCTTCAGGACCTCCCCCACCTC < 41bp 0.816239512498431 0.558426382294086 0.90202856 0.07224172 prediction 0.51562626040869 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107399355 chr7:107399357 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_62856 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr7:107399329-107399363
64251 chr3 129035550 129035550 1 + G T rs62266915 129035547 + 129035527 129035567 41 GGGGGCTCCAGGCCTGCCCGCAAGAGGAGCTTTAATTTGTC GGGGGCTCCAGGCCTGCCCGCAATAGGAGCTTTAATTTGTC < 41bp 0.757809210681785 0.365819530050992 0.73550797 0.19461519 prediction 0.51561842136357 Functional Loss - H1FX-AS1 ENSG00000206417 ncRNA_intronic Human antisense chr3:129035547 chr3:129035550 . . 0 24 hm5C_associated_SNPs_62857 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr3:129035528-129035550
64251 chr14 55169163 55169163 1 + C T LUAD 55169161 + 55169141 55169181 41 GCTCAATGGGTGGCAGAACTCTCGGGATTCTGGGATTTGCA GCTCAATGGGTGGCAGAACTCTTGGGATTCTGGGATTTGCA < 41bp 0.757808417874406 0.482576791255102 0.15833 0.10477209 prediction 0.515616835748811 Functional Loss - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55169161 chr14:55169163 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62858 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:55169141-55169165
64251 chr7 64498882 64498882 1 + G T LUAD 64498880 + 64498860 64498900 41 GAGGCAGAAGGAGCGGGACCCCGAGCACCGGGCCCTCTGCG GAGGCAGAAGGAGCGGGACCCCTAGCACCGGGCCCTCTGCG < 41bp 0.757785229948157 0.421254325215689 0.7046201 0.3519153 prediction 0.515570459896314 Functional Loss - CCT6P3 ENSG00000234585;ENSG00000239985 ncRNA_exonic Human other chr7:64498880 chr7:64498882 . . 0 23 hm5C_associated_SNPs_62864 0 0 3 CSTF2T POSTAR2 ENCODE chr7:64498850-64498906
64251 chr16 30997003 30997003 1 + G T UCEC 30997001 + 30996981 30997021 41 TGGCCGACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTC TGGCCGACTCTGCACAGGCCCATAAGCTGGTGTACCTGGTC < 41bp 0.757777446941914 0.405183808982128 0.7031827 0.19232509 prediction 0.515554893883827 Functional Loss - HSD3B7 ENSG00000099377;ENSG00000268863 CDS Human other chr16:30997001 chr16:30997003 nonsynonymous SNV 0.687 0 23 hm5C_associated_SNPs_62867 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30996979-30997003
64251 chr17 78972194 78972194 1 + C T CESC 78972192 + 78972172 78972212 41 ATAGAGCTGCCAGAGGTTCCCTCCGAGCCCCTTCCTGAGAA ATAGAGCTGCCAGAGGTTCCCTTCGAGCCCCTTCCTGAGAA < 41bp 0.757771552992572 0.487492865786028 0.8423083 0.09339857 prediction 0.515543105985143 Functional Loss - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78972192 chr17:78972194 nonsynonymous SNV 0.951 1 23 hm5C_associated_SNPs_62868 0 0 2 GRWD1 POSTAR2 ENCODE chr17:78972175-78972211
64251 chr17 36887606 36887606 1 + G C BRCA 36887605 + 36887585 36887625 41 CCTAGAACCCCAGCCAGGTCCGTGGTGGCCCTGAAGACCCC CCTAGAACCCCAGCCAGGTCCCTGGTGGCCCTGAAGACCCC < 41bp 0.757769902776206 0.434895245824602 0.4147608 0.20957488 prediction 0.515539805552412 Functional Loss - CISD3 ENSG00000230055 CDS Human other chr17:36887605 chr17:36887606 nonsynonymous SNV 0.868 0 22 hm5C_associated_SNPs_62869 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr17:36887595-36887626
64251 chr3 133494350 133494350 1 + G T COAD 133494347 + 133494327 133494367 41 TTGCTGTGCCTTGATGGTACCAGGAAACCTGTGGAGGAGTA TTGCTGTGCCTTGATGGTACCAGTAAACCTGTGGAGGAGTA < 41bp 0.757765922384934 0.367861757265136 0.55094993 0.21657154 prediction 0.515531844769869 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133494347 chr3:133494350 nonsynonymous SNV 0.045 4 24 hm5C_associated_SNPs_62870 0 0 5 DHX30 POSTAR2 ENCODE chr3:133494324-133494416
64251 chr3 10106509 10106509 1 + G T GBM 10106507 + 10106487 10106527 41 TCCTGCCGCTGCTGTTTTCTCAGGACTTTGCAAAAGATGGG TCCTGCCGCTGCTGTTTTCTCATGACTTTGCAAAAGATGGG < 41bp 0.876703295974349 0.618939898648505 0.85476875 0.20890617 prediction 0.515526794651689 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10106507 chr3:10106509 nonsynonymous SNV 0.349 0 23 hm5C_associated_SNPs_62873 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr3:10106500-10106520
64251 chr1 155581999 155581999 1 + C T PAAD 155581997 + 155581977 155582017 41 TCCAGATCCTGTGTGACCTGCACGATGGCTTCTCTGGGGTA TCCAGATCCTGTGTGACCTGCATGATGGCTTCTCTGGGGTA < 41bp 0.757742956075883 0.489745639239605 0.33313525 0.3309161 prediction 0.515485912151765 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155581997 chr1:155581999 synonymous SNV . 0 23 hm5C_associated_SNPs_62875 0 0 1 U2AF2 POSTAR2 ENCODE chr1:155581954-155582001
64251 chr12 57485106 57485106 1 + C T LUAD 57485104 + 57485084 57485124 41 TGGGCATGGCCACCAAGCCCCTCCATGTCCGGCGCCTGCAG TGGGCATGGCCACCAAGCCCCTTCATGTCCGGCGCCTGCAG < 41bp 0.757740382328696 0.476732809211932 0.95861214 0.34923208 prediction 0.515480764657393 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485104 chr12:57485106 synonymous SNV . 0 23 hm5C_associated_SNPs_62876 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:57485105-57485106
64251 chr2 131672640 131672640 1 + G T UCEC 131672637 + 131672617 131672657 41 GGCCAAAAATGAACGAGATCCAAGAATACAAAACATCCCTT GGCCAAAAATGAACGAGATCCAATAATACAAAACATCCCTT < 41bp 0.757733276679502 0.395318146870716 0.05046913 0.29111892 prediction 0.515466553359004 Functional Loss - AMER3;ARHGEF4 ENSG00000136002 CDS Human protein_coding chr2:131672637 chr2:131672640 nonsynonymous SNV 0.025 0 24 hm5C_associated_SNPs_62879 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:131672633-131672662
64251 chr21 40762734 40762734 1 + A T LUSC 40762730 + 40762710 40762750 41 CAACATGATGGACGAGTTTGCCAGATATGCCAGGCTGGAAA CAACATGATGGACGAGTTTGCCAGTTATGCCAGGCTGGAAA < 41bp 0.757731815036226 0.453967995810982 0.894971 0.2922039 prediction 0.515463630072453 Functional Loss - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40762730 chr21:40762734 nonsynonymous SNV 0.334 3 25 hm5C_associated_SNPs_62881 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr21:40762708-40762761
64251 chr16 67201791 67201791 1 + C T CESC 67201789 + 67201769 67201809 41 AAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAATGCC AAGGGAAAGGGAGCTTCAGCCCTGAGGGGCCCAGGAATGCC < 41bp 0.790045852300549 0.532330126170554 0.25800723 0.23353645 prediction 0.51543145225999 Functional Loss - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67201789 chr16:67201791 stopgain . 0 23 hm5C_associated_SNPs_62885 0 0 1 ZNF622 POSTAR2 ENCODE chr16:67201772-67201799
64251 chr19 16976289 16976289 1 + T C rs2303091 16976288 + 16976268 16976308 41 AAGTGTGCAGAAGAAGCTATCTCGGATGGCGCCGGAAGACC AAGTGTGCAGAAGAAGCTATCCCGGATGGCGCCGGAAGACC < 41bp 0.757709239000007 0.497763133984104 0.6944169 0.36932224 prediction 0.515418478000014 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976288 chr19:16976289 synonymous SNV . 0 22 hm5C_associated_SNPs_62887 0 0 9 GRWD1 POSTAR2 ENCODE chr19:16976269-16976357
64251 chr19 16976290 16976290 1 + C T SKCM 16976288 + 16976268 16976308 41 AAGTGTGCAGAAGAAGCTATCTCGGATGGCGCCGGAAGACC AAGTGTGCAGAAGAAGCTATCTTGGATGGCGCCGGAAGACC < 41bp 0.757709239000007 0.4837247759957 0.6944169 0.30061728 prediction 0.515418478000014 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976288 chr19:16976290 nonsynonymous SNV 0.410 4 23 hm5C_associated_SNPs_62888 0 0 9 GRWD1 POSTAR2 ENCODE chr19:16976269-16976357
64251 chr10 51827690 51827690 1 + G T rs542796272 51827688 + 51827668 51827708 41 TCACGCCCCGGGCAGCTTGGCTGGGGCTAGGCTTCCGGGGC TCACGCCCCGGGCAGCTTGGCTTGGGCTAGGCTTCCGGGGC < 41bp 0.884450902487803 0.626750153887011 0.93278253 0.409684 prediction 0.515401497201585 Functional Loss - WASHC2A ENSG00000099290 UTR5 Human protein_coding chr10:51827688 chr10:51827690 . . 0 23 hm5C_associated_SNPs_62890 0 0 1 DDX3X POSTAR2 ENCODE chr10:51827690-51827767
64251 chr3 150128353 150128353 1 + G C STAD 150128352 + 150128332 150128372 41 ACCGGCGCCGCAGCGAGCCCCGCCACGGCGGCCACCCTTCC ACCGGCGCCGCAGCGAGCCCCCCCACGGCGGCCACCCTTCC < 41bp 0.840662847279286 0.582966977190918 0.14464164 0.054893702 prediction 0.515391740176736 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128352 chr3:150128353 nonsynonymous SNV 0.050 1 22 hm5C_associated_SNPs_62892 0 0 2 RPS3 POSTAR2 ENCODE chr3:150128324-150128368
64251 chr19 39116703 39116703 1 + C T STAD 39116701 + 39116681 39116721 41 CAATCCGACAGATTTTGTACCTCGGGGACCTGCTGGAGACC CAATCCGACAGATTTTGTACCTTGGGGACCTGCTGGAGACC < 41bp 0.790106939724304 0.532426034969931 0.38180506 0.11659941 prediction 0.515361809508747 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39116701 chr19:39116703 synonymous SNV . 0 23 hm5C_associated_SNPs_62896 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39116672-39116725
64251 chr6 44197442 44197442 1 + C T BLCA 44197440 + 44197420 44197460 41 CCTTGCCTGAGCGGAACTCTCTCAGTGCCATCTTCAACAAT CCTTGCCTGAGCGGAACTCTCTTAGTGCCATCTTCAACAAT < 41bp 0.766857056949341 0.509185043618878 0.13267878 0.17942742 prediction 0.515344026660925 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44197440 chr6:44197442 synonymous SNV . 0 23 hm5C_associated_SNPs_62897 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44197433-44197464
64251 chr8 145161325 145161325 1 + C T LGG 145161323 + 145161303 145161343 41 CTGAAACCACAGCTGTGGAACGCGGTGGACGAGGAGATCTG CTGAAACCACAGCTGTGGAACGTGGTGGACGAGGAGATCTG < 41bp 0.764866510182672 0.507198187257544 0.6430103 0.6197307 prediction 0.515336645850257 Functional Loss - MAF1 ENSG00000179632 CDS Human protein_coding chr8:145161323 chr8:145161325 nonsynonymous SNV 0.877 2 23 hm5C_associated_SNPs_62899 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:145161305-145161333
64251 chr20 3888748 3888748 1 + C T BLCA 3888746 + 3888726 3888766 41 CAGGCATTCGGGACGTGCACCTCGAGCTGAAGGACCTGACT CAGGCATTCGGGACGTGCACCTTGAGCTGAAGGACCTGACT < 41bp 0.827509240995128 0.56984960502466 0.45715615 0.02337715 prediction 0.515319271940936 Functional Loss - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3888746 chr20:3888748 synonymous SNV . 0 23 hm5C_associated_SNPs_62902 0 0 35 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:3888729-3888757
64251 chr11 73915489 73915489 1 + C T COAD 73915487 + 73915467 73915507 41 GCCCTTTCTTGGGCTGTGTTCACGGTAAGTAGGTTGTTGAT GCCCTTTCTTGGGCTGTGTTCATGGTAAGTAGGTTGTTGAT < 41bp 0.757657658229988 0.486834182107783 0.8977998 0.8742157 prediction 0.515315316459976 Functional Loss - PPME1 ENSG00000214517 CDS Human protein_coding chr11:73915487 chr11:73915489 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62903 0 0 3 DDX24 POSTAR2 ENCODE chr11:73915397-73915513
64251 chr1 236228283 236228283 1 - C A HNSC 236228286 - 236228266 236228306 41 CTGTGGGCTGCCTGAGCCGCCAGGAGCTCTTTCCCTTCGGC CTGTGGGCTGCCTGAGCCGCCAGTAGCTCTTTCCCTTCGGC < 41bp 0.90781577971286 0.650170756682412 0.92626846 0.6441386 prediction 0.515290046060894 Functional Loss - NID1 ENSG00000116962 CDS Human protein_coding chr1:236228286 chr1:236228283 stopgain 0.993 0 24 hm5C_associated_SNPs_62905 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:236228267-236228290
64251 chr16 85689989 85689989 1 + G T LUAD 85689986 + 85689966 85690006 41 AGCTAAGGCGGGAGAGGGAGCGCGAGCGCGAGCGCGAGCGT AGCTAAGGCGGGAGAGGGAGCGCTAGCGCGAGCGCGAGCGT < 41bp 0.911937910750498 0.654292928929925 0.7214506 0.5464867 prediction 0.515289963641147 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689986 chr16:85689989 stopgain 0.013 1 24 hm5C_associated_SNPs_62906 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:85689989-85689990
64251 chr2 32289128 32289128 1 + G T ESCA 32289125 + 32289105 32289145 41 TTCCACCTGGGGCTCCTCTTCGTGTGGCTCTGCCAGCGCTT TTCCACCTGGGGCTCCTCTTCGTTTGGCTCTGCCAGCGCTT < 41bp 0.757640136177796 0.37289956340088 0.47374302 0.3102885 prediction 0.515280272355592 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32289125 chr2:32289128 synonymous SNV . 0 24 hm5C_associated_SNPs_62907 0 0 1 GRWD1 POSTAR2 ENCODE chr2:32289067-32289154
64251 chr5 75893301 75893301 1 + G C LUAD 75893300 + 75893280 75893320 41 CCATATCAATGCTGTCATTCCGGAAGGTGACCCCGAGAATA CCATATCAATGCTGTCATTCCCGAAGGTGACCCCGAGAATA < 41bp 0.757626154261366 0.471213377033288 0.5253048 0.6218574 prediction 0.515252308522733 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75893300 chr5:75893301 synonymous SNV . 0 22 hm5C_associated_SNPs_62909 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:75893290-75893317
64251 chr5 75893302 75893302 1 + G T LUAD 75893300 + 75893280 75893320 41 CCATATCAATGCTGTCATTCCGGAAGGTGACCCCGAGAATA CCATATCAATGCTGTCATTCCGTAAGGTGACCCCGAGAATA < 41bp 0.757626154261366 0.446560552483144 0.5253048 0.124418944 prediction 0.515252308522733 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75893300 chr5:75893302 stopgain 0.992 0 23 hm5C_associated_SNPs_62910 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:75893290-75893317
64251 chr1 112018687 112018687 1 + G T OV 112018685 + 112018665 112018705 41 CTCCACATGTAAACCCGACACTGGTGAGTTTACGACAGGAA CTCCACATGTAAACCCGACACTTGTGAGTTTACGACAGGAA < 41bp 0.757608802307714 0.430624182657481 0.122306526 0.07698044 prediction 0.515217604615427 Functional Loss - C1orf162 ENSG00000143110 CDS Human protein_coding chr1:112018685 chr1:112018687 stopgain 0.063 0 23 hm5C_associated_SNPs_62913 0 0 1 BUD13 POSTAR2 ENCODE chr1:112018627-112018695
64251 chr5 68425367 68425367 1 + G T OV 68425365 + 68425345 68425385 41 ACATATGTCTGGCCTAAGTACTGGATTTCATGATGTTCTGG ACATATGTCTGGCCTAAGTACTTGATTTCATGATGTTCTGG < 41bp 0.757607222564535 0.463235961203098 0.18632841 0.07327545 prediction 0.515214445129069 Functional Loss - SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68425365 chr5:68425367 stopgain 1.000 1 23 hm5C_associated_SNPs_62914 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68425346-68425374
64251 chr22 38201781 38201781 1 + C T UCEC 38201779 + 38201759 38201799 41 TTGTCCATCAAGCGCCTGGTCACCACCGGTGTCCTCAAGCA TTGTCCATCAAGCGCCTGGTCATCACCGGTGTCCTCAAGCA < 41bp 0.787490245921383 0.529887799512002 0.06996 0.1178354 prediction 0.515204892818762 Functional Loss - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201779 chr22:38201781 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_62917 0 0 1 RBM15 POSTAR2 ENCODE chr22:38201767-38201807
64251 chr19 46375751 46375751 1 + A T UCEC 46375747 + 46375727 46375767 41 GGGAGAATCAGCAGCGCTGGCAGAACTCCATTCGCCACTCG GGGAGAATCAGCAGCGCTGGCAGATCTCCATTCGCCACTCG < 41bp 0.851715576501574 0.594120691522169 0.32017502 0.2457963 prediction 0.51518976995881 Functional Loss - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375747 chr19:46375751 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_62918 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:46375751-46375770
64251 chr2 241514487 241514487 1 + G T GBM 241514484 + 241514464 241514504 41 CTGATGAACCTGTTCACCTACGAGAAGGGCTACTGCTTCGT CTGATGAACCTGTTCACCTACGATAAGGGCTACTGCTTCGT < 41bp 0.75758802029041 0.363799245431177 0.303743 0.13235077 prediction 0.51517604058082 Functional Loss - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514484 chr2:241514487 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62919 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:241514451-241514497
64251 chr17 29058928 29058928 1 + G C rs536085168 29058924 + 29058904 29058944 41 ATGGCGCCTCAGAAGCACGGCGGTGGGGGAGGGGGCGGCTC ATGGCGCCTCAGAAGCACGGCGGTCGGGGAGGGGGCGGCTC < 41bp 0.77560849662664 0.518041090263416 0.8587553 0.48528677 prediction 0.515134812726447 Functional Loss - SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29058924 chr17:29058928 . . 0 25 hm5C_associated_SNPs_62928 0 0 1 AARS POSTAR2 ENCODE chr17:29058925-29058978
64251 chr5 149927875 149927875 1 + C T SKCM 149927873 + 149927853 149927893 41 CATCCTCGAAGCTGCGTGCCCTCCAGAACCGCTGCCTGGTC CATCCTCGAAGCTGCGTGCCCTTCAGAACCGCTGCCTGGTC < 41bp 0.818023346859245 0.560478092620673 0.94872665 0.24629894 prediction 0.515090508477144 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149927873 chr5:149927875 synonymous SNV . 0 23 hm5C_associated_SNPs_62933 0 0 2 GRWD1 POSTAR2 ENCODE chr5:149927855-149927932
64251 chr2 241569884 241569884 1 + C T CESC 241569882 + 241569862 241569902 41 AGCACCCGGCACAATTTCAACTCCATGGCGTTCCCGCTGCT AGCACCCGGCACAATTTCAACTTCATGGCGTTCCCGCTGCT < 41bp 0.757542980809663 0.493327338500387 0.95402366 0.12027049 prediction 0.515085961619326 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569882 chr2:241569884 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_62934 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241569863-241569888
64251 chr1 193104711 193104711 1 + C T UCEC 193104709 + 193104689 193104729 41 TTTAGCAGAAGCAAAGAAACCACGAATTGAGGTAAAGAAAC TTTAGCAGAAGCAAAGAAACCATGAATTGAGGTAAAGAAAC < 41bp 0.790331135354109 0.532793205254977 0.04715365 0.047450304 prediction 0.515075860198264 Functional Loss - CDC73 ENSG00000134371 CDS Human protein_coding chr1:193104709 chr1:193104711 stopgain 0.988 1 23 hm5C_associated_SNPs_62935 0 0 9 BUD13 POSTAR2 ENCODE chr1:193104675-193104718
64251 chr2 70504479 70504479 1 + G T UCEC 70504476 + 70504456 70504496 41 CGCTGGAACGGGCACACAGACATGATTGATCAGGATGGCTT CGCTGGAACGGGCACACAGACATTATTGATCAGGATGGCTT < 41bp 0.757537457382711 0.387247494970187 0.17355275 0.10862705 prediction 0.515074914765423 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70504476 chr2:70504479 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_62936 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:70504461-70504551
64251 chr2 216182901 216182901 1 + A C UCEC 216182897 + 216182877 216182917 41 CAGAGATGTCTCTGAGTTGACGGGATTTCCTGAAATGTTGG CAGAGATGTCTCTGAGTTGACGGGCTTTCCTGAAATGTTGG < 41bp 0.777072695333045 0.519542274123047 0.5235159 0.57427114 prediction 0.515060842419994 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216182897 chr2:216182901 synonymous SNV . 0 25 hm5C_associated_SNPs_62937 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:216182877-216182909
64251 chr5 137722040 137722040 1 + G T UCEC 137722038 + 137722018 137722058 41 ACGGCAGGACTCTGGTGGTGCAGGATGAGCCTGTAGGTGGG ACGGCAGGACTCTGGTGGTGCATGATGAGCCTGTAGGTGGG < 41bp 0.75752444466441 0.415311840459033 0.69003344 0.25327718 prediction 0.51504888932882 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137722038 chr5:137722040 stopgain 0.998 4 23 hm5C_associated_SNPs_62941 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:137722017-137722044
64251 chr4 25393993 25393993 1 + G T PRAD 25393991 + 25393971 25394011 41 TCTGTTGTACTCTTTCTTACCTGAAGTAACTCGGATGGCCA TCTGTTGTACTCTTTCTTACCTTAAGTAACTCGGATGGCCA < 41bp 0.757494302366959 0.443297154350092 0.30172712 0.14006528 prediction 0.514988604733918 Functional Loss - ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25393991 chr4:25393993 stopgain 1.000 1 23 hm5C_associated_SNPs_62948 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:25393960-25393998
64251 chr19 7712288 7712288 1 + G T LUAD 7712286 + 7712266 7712306 41 ACAAGGCTGGCATAGAAGCCCGGGCGGGCCCCCGGCTCATC ACAAGGCTGGCATAGAAGCCCGTGCGGGCCCCCGGCTCATC < 41bp 0.84622389640595 0.58873303150966 0.83518183 0.36150962 prediction 0.51498172979258 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712286 chr19:7712288 synonymous SNV . 0 23 hm5C_associated_SNPs_62949 0 0 2 FMR1 POSTAR2 ENCODE chr19:7712272-7712387
64251 chr17 691296 691296 1 + C T SKCM 691294 + 691274 691314 41 TATTATTGATTTGTGACAATCTCCGTGACCCTGGGAACCTG TATTATTGATTTGTGACAATCTTCGTGACCCTGGGAACCTG < 41bp 0.757490232822386 0.467145809937415 0.07785985 0.028594792 prediction 0.514980465644772 Functional Loss - MRM3 ENSG00000171861 CDS Human protein_coding chr17:691294 chr17:691296 synonymous SNV . 0 23 hm5C_associated_SNPs_62950 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:691252-691315
64251 chr22 30403266 30403266 1 + C T UCEC 30403264 + 30403244 30403284 41 GCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGG GCTGTCAACTAGGAACACTTCTTGAGACTTTCCCAATGGGG < 41bp 0.812316248936245 0.554827579374446 0.37453693 0.07434508 prediction 0.514977339123598 Functional Loss - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30403264 chr22:30403266 stopgain 0.998 1 23 hm5C_associated_SNPs_62951 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr22:30403247-30403283
64251 chr17 40940389 40940389 1 + C T SKCM 40940387 + 40940367 40940407 41 GGAGACCCCCAGGGAGGAATCTCCGGCGCAGACCCCGATCC GGAGACCCCCAGGGAGGAATCTTCGGCGCAGACCCCGATCC < 41bp 0.805583053992311 0.548100050939138 0.8944633 0.84400856 prediction 0.514966006106346 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40940387 chr17:40940389 synonymous SNV . 0 23 hm5C_associated_SNPs_62953 0 0 2 DDX24 POSTAR2 ENCODE chr17:40940307-40940421
64251 chr3 182583334 182583334 1 + G T UCEC 182583331 + 182583311 182583351 41 CAATTAATGGCATGAAATACCAAGAAATTAATGGTAGACTT CAATTAATGGCATGAAATACCAATAAATTAATGGTAGACTT < 41bp 0.757476731418584 0.399332129618858 0.3896188 0.20395511 prediction 0.514953462837169 Functional Loss - ATP11B ENSG00000058063 CDS Human protein_coding chr3:182583331 chr3:182583334 stopgain 1.000 0 24 hm5C_associated_SNPs_62954 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:182583269-182583375
64251 chr16 21261429 21261429 1 + C T SKCM 21261427 + 21261407 21261447 41 TCTTCTTCCAAGGGTACCTTCTCCAGATCATCCCCTTCAAA TCTTCTTCCAAGGGTACCTTCTTCAGATCATCCCCTTCAAA < 41bp 0.757465590446869 0.478178553231599 0.94268906 0.086491674 prediction 0.514931180893737 Functional Loss - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261427 chr16:21261429 nonsynonymous SNV 0.501 2 23 hm5C_associated_SNPs_62959 0 0 2 RPS3 POSTAR2 ENCODE chr16:21261411-21261461
64251 chr2 85770091 85770091 1 + A T KIRP 85770087 + 85770067 85770107 41 TTTTCCATTATGGTACCTCTCAGAAGAGTGAGAGAGAGCTA TTTTCCATTATGGTACCTCTCAGATGAGTGAGAGAGAGCTA < 41bp 0.845122428130706 0.587685037936952 0.82940185 0.8194748 prediction 0.514874780387506 Functional Loss - MAT2A ENSG00000168906 CDS Human protein_coding chr2:85770087 chr2:85770091 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_62966 0 0 23 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:85770000-85770120
64251 chr11 126147485 126147485 1 + G C BLCA 126147481 + 126147461 126147501 41 TGGCATTGGGCGAGCTGTAGCAGAGATGGTACTGAAGGGCA TGGCATTGGGCGAGCTGTAGCAGACATGGTACTGAAGGGCA < 41bp 0.757424904593321 0.481091060752544 0.86856365 0.5089862 prediction 0.514849809186641 Functional Loss - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126147481 chr11:126147485 nonsynonymous SNV 0.412 3 25 hm5C_associated_SNPs_62968 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:126147464-126147504
64251 chr18 12407992 12407992 1 + G C rs116806842 12407991 + 12407971 12408011 41 GGCAATGAAGATCTGGAGCTCGGAGCACGTGTTTGGGTGAG GGCAATGAAGATCTGGAGCTCCGAGCACGTGTTTGGGTGAG < 41bp 0.836201997958132 0.578777980770792 0.890235 0.68052244 prediction 0.514848034374681 Functional Loss - PRELID3A ENSG00000141391 CDS Human protein_coding chr18:12407991 chr18:12407992 synonymous SNV . 0 22 hm5C_associated_SNPs_62969 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:12407973-12407994
64251 chr17 37667858 37667858 1 + C T STAD 37667856 + 37667836 37667876 41 GCTAGGAGAGGAACGTTACACACCAGCCATAGATGTTTGGA GCTAGGAGAGGAACGTTACACATCAGCCATAGATGTTTGGA < 41bp 0.757416606405918 0.46440176313108 0.15491071 0.14440215 prediction 0.514833212811835 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37667856 chr17:37667858 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_62972 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:37667834-37667859
64251 chr8 20068769 20068769 1 + G T UCEC 20068767 + 20068747 20068787 41 TCGGCCATCGATGGGATGAACAGTATTGCTAGGGGGCAGAA TCGGCCATCGATGGGATGAACATTATTGCTAGGGGGCAGAA < 41bp 0.757413424525914 0.413834093290143 0.25397265 0.20939296 prediction 0.514826849051828 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20068767 chr8:20068769 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_62974 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221661 chr8:20068769-20068770
64251 chr12 54447901 54447901 1 + C T CESC 54447899 + 54447879 54447919 41 CGCGCCCTAGCTACCCTGAGCGCCAGTATAGCTGCACCAGT CGCGCCCTAGCTACCCTGAGCGTCAGTATAGCTGCACCAGT < 41bp 0.779470059770236 0.522063691801869 0.37110555 0.15427351 prediction 0.514812735936736 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54447899 chr12:54447901 synonymous SNV . 0 23 hm5C_associated_SNPs_62977 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:54447891-54447916
64251 chr19 48967993 48967993 1 + C T STAD 48967991 + 48967971 48968011 41 AGAAGATGGGGCTGCTAGCCCCCGAGTTCTCACACCAACCC AGAAGATGGGGCTGCTAGCCCCTGAGTTCTCACACCAACCC < 41bp 0.757401821609112 0.494665956008615 0.17224684 0.15789717 prediction 0.514803643218224 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967991 chr19:48967993 stopgain 0.581 0 23 hm5C_associated_SNPs_62978 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:48967986-48968021
64251 chr3 50131270 50131270 1 + A T SKCM 50131266 + 50131246 50131286 41 GACGAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCC GACGAGAGGGAGAGCAAGACCATCTTGCTGCGCGGCCTTCC < 41bp 0.757400123587229 0.426772983866494 0.0747557 0.14918545 prediction 0.514800247174458 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50131266 chr3:50131270 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_62979 0 0 8 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50131200-50131280
64251 chr1 32688180 32688180 1 + G C BLCA 32688176 + 32688156 32688196 41 GGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCG GGGCCATGAGCGGTCCATTACGCACATTAAGTATAACCGCG < 41bp 0.816137525846763 0.558752840618521 0.20712525 0.026316196 prediction 0.514769370456485 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32688176 chr1:32688180 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_62983 0 0 23 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:32688140-32688200
64251 chr11 2424185 2424185 1 + C T SKCM 2424183 + 2424163 2424203 41 GGAGGGGGCGGCCAGACGGGCTCCATCCTCTGTGGCCCACA GGAGGGGGCGGCCAGACGGGCTTCATCCTCTGTGGCCCACA < 41bp 0.757372149888895 0.499651257041216 0.8497969 0.30507103 prediction 0.51474429977779 Functional Loss - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424183 chr11:2424185 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_62989 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:2424168-2424194
64251 chr2 120195983 120195983 1 + G T rs58035961 120195980 + 120195960 120196000 41 GGTAATGATTAACACCCATGCTGGGGATGCATGGAGGTGAA GGTAATGATTAACACCCATGCTGTGGATGCATGGAGGTGAA < 41bp 0.832850248412046 0.5754797018623 0.44354838 0.08724663 prediction 0.514741093099492 Functional Loss - TMEM37 ENSG00000171227 UTR3 Human protein_coding chr2:120195980 chr2:120195983 . . 0 24 hm5C_associated_SNPs_62992 0 0 4 DDX3X POSTAR2 ENCODE chr2:120195970-120196008
64251 chr12 110784230 110784230 1 + G T HNSC 110784227 + 110784207 110784247 41 CTCATAATGCCCCTGGTGATCTGGGTCTATAGCACAGACAC CTCATAATGCCCCTGGTGATCTGTGTCTATAGCACAGACAC < 41bp 0.757370452716926 0.37706502649516 0.4343006 0.03967035 prediction 0.514740905433852 Functional Loss - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110784227 chr12:110784230 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_62993 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:110784220-110784260
64251 chr5 54624617 54624617 1 + G T SARC 54624615 + 54624595 54624635 41 TCTAGTATCTGCACATACCTCAGCGGGAAAAACAGTATGCG TCTAGTATCTGCACATACCTCATCGGGAAAAACAGTATGCG < 41bp 0.75736383737614 0.423341649478803 0.32806832 0.063846916 prediction 0.514727674752279 Functional Loss - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54624615 chr5:54624617 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_62996 0 0 2 YBX3 POSTAR2 ENCODE chr5:54624568-54624639
64251 chr3 101283908 101283908 1 + A T LUSC 101283904 + 101283884 101283924 41 GATGAAGATCCTCTAGCTGCCACCAGAGAGTTCATTGAGAT GATGAAGATCCTCTAGCTGCCACCTGAGAGTTCATTGAGAT < 41bp 0.860174844317435 0.602812216169516 0.1773164 0.11454901 prediction 0.514725256295838 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101283904 chr3:101283908 stopgain 0.958 1 25 hm5C_associated_SNPs_62997 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:101283879-101283984
64251 chr6 25665243 25665243 1 + A C LUSC 25665239 + 25665219 25665259 41 CGCCGGGAAAACCCACTGGACAGCAGCGTGGAGTTTATGCA CGCCGGGAAAACCCACTGGACAGCCGCGTGGAGTTTATGCA < 41bp 0.757362485717175 0.333387225657153 0.2991999 0.25148696 prediction 0.51472497143435 Functional Loss - SCGN ENSG00000079689 CDS Human protein_coding chr6:25665239 chr6:25665243 nonsynonymous SNV 0.961 4 25 hm5C_associated_SNPs_62998 0 0 1 PRPF8 POSTAR2 ENCODE chr6:25665242-25665292
64251 chr11 70224237 70224237 1 + A C rs144543406 70224233 + 70224213 70224253 41 TGGGTCAGCAGAGACTCTCCCTGCAAACTTCCGGGTGACTT TGGGTCAGCAGAGACTCTCCCTGCCAACTTCCGGGTGACTT < 41bp 0.757361548008822 0.332786679466536 0.35993987 0.16568482 prediction 0.514723096017644 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70224233 chr11:70224237 synonymous SNV . 0 25 hm5C_associated_SNPs_62999 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr11:70224237-70224256
64251 chr15 85343188 85343188 1 + C T UCEC 85343186 + 85343166 85343206 41 CCAGACGTCCAAAGTGAAACCTCCGGGTGGACATTCCCCTC CCAGACGTCCAAAGTGAAACCTTCGGGTGGACATTCCCCTC < 41bp 0.757357249627359 0.481704856763414 0.3673662 0.20235047 prediction 0.514714499254718 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85343186 chr15:85343188 nonsynonymous SNV 0.651 0 23 hm5C_associated_SNPs_63001 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85343151-85343189
64251 chr16 30676988 30676988 1 + G T THYM 30676986 + 30676966 30677006 41 ACCCTGAGCTGCCACCACGACTGGGGCCGGTGCCGAGCGGG ACCCTGAGCTGCCACCACGACTTGGGCCGGTGCCGAGCGGG < 41bp 0.757348503457635 0.411419348477113 0.5238805 0.15426731 prediction 0.51469700691527 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30676986 chr16:30676988 synonymous SNV . 0 23 hm5C_associated_SNPs_63003 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30676984-30676997
64251 chr11 76171063 76171063 1 + C T SKCM 76171061 + 76171041 76171081 41 CAGCATAGCAACGGTTAAGTCTCCAAGACCTGCCAGTCCTG CAGCATAGCAACGGTTAAGTCTTCAAGACCTGCCAGTCCTG < 41bp 0.806676847864256 0.54933004106985 0.97263813 0.16417593 prediction 0.514693613588811 Functional Loss - EMSY ENSG00000158636 CDS Human protein_coding chr11:76171061 chr11:76171063 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63004 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:76171053-76171084
64251 chr7 127343360 127343360 1 + G T PRAD 127343357 + 127343337 127343377 41 GCTGCCACAACCAGAACATTCTGGGTACCATCCTTCATCCA GCTGCCACAACCAGAACATTCTGTGTACCATCCTTCATCCA < 41bp 0.757341879670854 0.383958403321205 0.24926534 0.036097586 prediction 0.514683759341707 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127343357 chr7:127343360 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63006 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:127343323-127343361
64251 chr19 1257348 1257348 1 + G C rs373601491 1257347 + 1257327 1257367 41 TCCGAGAGCCCCGGAGAGAACGTGGCCCAGCCCTGGAGGGC TCCGAGAGCCCCGGAGAGAACCTGGCCCAGCCCTGGAGGGC < 41bp 0.797597110304924 0.540269947622402 0.891864 0.8111707 prediction 0.514654325365045 Functional Loss - MIDN ENSG00000167470 UTR3 Human protein_coding chr19:1257347 chr19:1257348 . . 0 22 hm5C_associated_SNPs_63010 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:1257318-1257349
64251 chr3 73004380 73004380 1 + C T READ 73004378 + 73004358 73004398 41 TTGCAGCCATGGCCCCTGAGCACGAAATCCCCAAGATTGGC TTGCAGCCATGGCCCCTGAGCATGAAATCCCCAAGATTGGC < 41bp 0.809021204895941 0.551695820021228 0.14388165 0.074034125 prediction 0.514650769749427 Functional Loss - GXYLT2 ENSG00000172986 CDS Human protein_coding chr3:73004378 chr3:73004380 synonymous SNV . 0 23 hm5C_associated_SNPs_63011 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:73004349-73004381
64251 chr9 135864569 135864569 1 + C T UCEC 135864567 + 135864547 135864587 41 GCTGTGAGCCTGGAGCAGCACACGCACGTCCACTCCCAGGT GCTGTGAGCCTGGAGCAGCACATGCACGTCCACTCCCAGGT < 41bp 0.757315199340581 0.499878032289596 0.23009878 0.30408558 prediction 0.514630398681162 Functional Loss - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135864567 chr9:135864569 nonsynonymous SNV 0.855 0 23 hm5C_associated_SNPs_63014 0 0 1 BUD13 POSTAR2 ENCODE chr9:135864545-135864594
64251 chr19 36244125 36244125 1 + C T CESC 36244123 + 36244103 36244143 41 GCGTGAATGCTCTCCCAGCTCACCCCTGCCCCCGCTGCCTG GCGTGAATGCTCTCCCAGCTCATCCCTGCCCCCGCTGCCTG < 41bp 0.769097304412231 0.511799857324663 0.05083689 0.036685675 prediction 0.514594894175136 Functional Loss - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36244123 chr19:36244125 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_63016 0 0 1 ZNF622 POSTAR2 ENCODE chr19:36244096-36244161
64251 chr20 3204021 3204021 1 + G C BLCA 3204017 + 3203997 3204037 41 ACTGTCACCCCTCAGGTACGCAGAGATGCCTAAGGCGGAGA ACTGTCACCCCTCAGGTACGCAGACATGCCTAAGGCGGAGA < 41bp 0.757284178059583 0.480744675751317 0.65066797 0.2829101 prediction 0.514568356119166 Functional Loss - ITPA ENSG00000125877 CDS Human protein_coding chr20:3204017 chr20:3204021 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_63020 0 0 6 BUD13 POSTAR2 ENCODE chr20:3203980-3204046
64251 chr2 65216648 65216648 1 + G C rs7609068 65216647 + 65216627 65216667 41 ACCTGCTCCTGCGCCAGGCCCGGAGACCCCCGGGGCGGCTT ACCTGCTCCTGCGCCAGGCCCCGAGACCCCCGGGGCGGCTT < 41bp 0.757272791421344 0.468717466228479 0.9157653 0.7515292 prediction 0.514545582842687 Functional Loss - SLC1A4 ENSG00000115902 UTR5 Human protein_coding chr2:65216647 chr2:65216648 . . 0 22 hm5C_associated_SNPs_63023 0 0 4 DDX3X POSTAR2 ENCODE chr2:65216614-65216692
64251 chrX 47101705 47101705 1 + G T LUSC 47101703 + 47101683 47101723 41 ATCCGCGCCGCAAGCCAGAGCAGGTGTGGGGCAGTGGGGGC ATCCGCGCCGCAAGCCAGAGCATGTGTGGGGCAGTGGGGGC < 41bp 0.757261477886468 0.397545530762445 0.867259 0.2911123 prediction 0.514522955772935 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101703 chrX:47101705 nonsynonymous SNV 0.960 4 23 hm5C_associated_SNPs_63025 0 0 1 DDX6 POSTAR2 ENCODE chrX:47101661-47101706
64251 chr15 41192287 41192287 1 + C T COAD 41192285 + 41192265 41192305 41 GAGCGGCCCGACTGCCTGGACACGGTCCTGGCCCGGGAGGC GAGCGGCCCGACTGCCTGGACATGGTCCTGGCCCGGGAGGC < 41bp 0.757252082147955 0.499823841087419 0.31540763 0.29144323 prediction 0.514504164295911 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192285 chr15:41192287 nonsynonymous SNV 0.979 1 23 hm5C_associated_SNPs_63027 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:41192286-41192324
64251 chr7 99219167 99219167 1 + G T BRCA 99219165 + 99219145 99219185 41 GGAGCAGCTCAGTCAGGACCCTGGAGATGAGACACGGGCCT GGAGCAGCTCAGTCAGGACCCTTGAGATGAGACACGGGCCT < 41bp 0.875353116698666 0.618106775939918 0.36498648 0.2963776 prediction 0.514492681517496 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99219165 chr7:99219167 stopgain 0.482 0 23 hm5C_associated_SNPs_63031 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:99219139-99219173
64251 chr20 43052756 43052756 1 + C T LGG 43052754 + 43052734 43052774 41 CAACGACCGCCAGTATGACTCGCGTGGCCGCTTTGGAGAGC CAACGACCGCCAGTATGACTCGTGTGGCCGCTTTGGAGAGC < 41bp 0.776275933412787 0.51903629852376 0.3292367 0.3404808 prediction 0.514479269778054 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052754 chr20:43052756 nonsynonymous SNV 0.172 3 23 hm5C_associated_SNPs_63034 2 0 1 PPIG POSTAR2 ENCODE chr20:43052747-43052807
64251 chr1 161771957 161771957 1 + C T rs146192208 161771955 + 161771935 161771975 41 GAGTCACACAGCTCCCTAATCACGTGGTGAATGTGGTACCA GAGTCACACAGCTCCCTAATCATGTGGTGAATGTGGTACCA < 41bp 0.776661472800021 0.519427532708299 0.84239435 0.6670073 prediction 0.514467880183444 Functional Loss - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161771955 chr1:161771957 synonymous SNV . 0 23 hm5C_associated_SNPs_63036 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:161771956-161771992
64251 chrX 129150016 129150016 1 + C T UCEC 129150014 + 129149994 129150034 41 TCGGGCTAAGGCCGGGCAGGCTCGAGTGAAACAGGAAAGCG TCGGGCTAAGGCCGGGCAGGCTTGAGTGAAACAGGAAAGCG < 41bp 0.764247094461114 0.507024700559873 0.22900748 0.29457608 prediction 0.514444787802483 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129150014 chrX:129150016 stopgain 0.999 0 23 hm5C_associated_SNPs_63037 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149992-129150017
64251 chr2 128186126 128186126 1 + C T SKCM 128186124 + 128186104 128186144 41 GCGGCCTTGCAGAGCGCGAGCTCAATCAGGCCGGCCAGGAG GCGGCCTTGCAGAGCGCGAGCTTAATCAGGCCGGCCAGGAG < 41bp 0.774661456344724 0.517440516586437 0.10796359 0.07972109 prediction 0.514441879516574 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128186124 chr2:128186126 synonymous SNV . 0 23 hm5C_associated_SNPs_63038 0 0 2 RPS3 POSTAR2 ENCODE chr2:128186121-128186173
64251 chr20 4680094 4680094 1 + C T rs112637437 4680092 + 4680072 4680112 41 ATGGTGGTGGCTGGGGGCAGCCCCATGGTGGTGGCTGGGGA ATGGTGGTGGCTGGGGGCAGCCTCATGGTGGTGGCTGGGGA < 41bp 0.783004675153133 0.525786230081855 0.86861664 0.45055985 prediction 0.514436890142556 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680092 chr20:4680094 synonymous SNV . 0 23 hm5C_associated_SNPs_63039 2 0 11 DDX6 POSTAR2 ENCODE chr20:4680070-4680149
64251 chr20 37631466 37631466 1 + C T SKCM 37631464 + 37631444 37631484 41 TCGAAACTGTGGTGAAAATTCACCAGACAGAGGGAGACGGA TCGAAACTGTGGTGAAAATTCATCAGACAGAGGGAGACGGA < 41bp 0.826645557173421 0.56943036507144 0.20338961 0.18904951 prediction 0.514430384203961 Functional Loss - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37631464 chr20:37631466 synonymous SNV . 0 23 hm5C_associated_SNPs_63041 0 0 1 U2AF2 POSTAR2 ENCODE chr20:37631407-37631492
64251 chr8 145732180 145732180 1 + G C rs147998249 145732176 + 145732156 145732196 41 CTGGAGGAGACCGGCATCTGCGTGGTGCCAGGGAGCGGCTT CTGGAGGAGACCGGCATCTGCGTGCTGCCAGGGAGCGGCTT < 41bp 0.801177759105698 0.543963126298276 0.3771099 0.2683092 prediction 0.514429265614845 Functional Loss - GPT ENSG00000167701 CDS Human protein_coding chr8:145732176 chr8:145732180 nonsynonymous SNV 0.950 2 25 hm5C_associated_SNPs_63042 0 0 2 EFTUD2 POSTAR2 ENCODE chr8:145732137-145732193
64251 chr2 27167672 27167672 1 + A C SKCM 27167668 + 27167648 27167688 41 ATGGGGGCATGAGGGACCTTCACGAATCCAGCTTCAGCCTC ATGGGGGCATGAGGGACCTTCACGCATCCAGCTTCAGCCTC < 41bp 0.925991752699295 0.668795563636291 0.16069382 0.1145702 prediction 0.514392378126008 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27167668 chr2:27167672 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_63045 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:27167662-27167684
64251 chr10 7763634 7763634 1 + C T UCEC 7763632 + 7763612 7763652 41 GCGCACGTCTCCTTCAAGCCCACGGTAGCACAGCAGAGAAT GCGCACGTCTCCTTCAAGCCCATGGTAGCACAGCAGAGAAT < 41bp 0.757193439170509 0.491653882862905 0.14714485 0.1536851 prediction 0.514386878341018 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7763632 chr10:7763634 nonsynonymous SNV 0.361 3 23 hm5C_associated_SNPs_63046 0 0 2 SND1 POSTAR2 ENCODE chr10:7763618-7763640
64251 chr12 109945424 109945424 1 + C T GBM 109945422 + 109945402 109945442 41 TGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTA TGTGGGCATTTATCTGTGAGCTTGGGCCCCACGGAGGGTTA < 41bp 0.757175896995009 0.485530149251448 0.1460537 0.16550556 prediction 0.514351793990019 Functional Loss - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109945422 chr12:109945424 synonymous SNV . 0 23 hm5C_associated_SNPs_63048 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:109945407-109945434
64251 chrX 54578117 54578117 1 + A C STAD 54578113 + 54578093 54578133 41 TGCGTAACTGCGTCCACGTGCAGAAGCTGGCAGACCCTGTG TGCGTAACTGCGTCCACGTGCAGACGCTGGCAGACCCTGTG < 41bp 0.757174867101732 0.348043026098573 0.3082258 0.2616871 prediction 0.514349734203463 Functional Loss - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578113 chrX:54578117 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_63049 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:54578098-54578131
64251 chr20 43052920 43052920 1 + G T LUAD 43052918 + 43052898 43052938 41 CGTGCCAAGCCCAGGAGGGGCGGGGTTGGAGTGGGGACTCC CGTGCCAAGCCCAGGAGGGGCGTGGTTGGAGTGGGGACTCC < 41bp 0.882115589925493 0.624958976688984 0.9101862 0.8769562 prediction 0.514313226473019 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052918 chr20:43052920 synonymous SNV . 0 23 hm5C_associated_SNPs_63051 0 0 6 EFTUD2 POSTAR2 ENCODE chr20:43052919-43053013
64251 chr13 115022697 115022697 1 + G T KIRP 115022695 + 115022675 115022715 41 AGGTCGGCGTGGTTGCATTTCAGAATGGAGAGTAAGTACTG AGGTCGGCGTGGTTGCATTTCATAATGGAGAGTAAGTACTG < 41bp 0.856063649805434 0.598929105573934 0.45114055 0.24166518 prediction 0.514269088463 Functional Loss - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115022695 chr13:115022697 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_63055 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:115022695-115022722
64251 chr6 126080350 126080350 1 + C T SKCM 126080348 + 126080328 126080368 41 GAAGTTGCGCGGTACCTGAGCTCCGTGGAAGGCCTGGACTC GAAGTTGCGCGGTACCTGAGCTTCGTGGAAGGCCTGGACTC < 41bp 0.79258739720938 0.535460441974288 0.32261574 0.31553775 prediction 0.514253910470182 Functional Loss - HEY2 ENSG00000135547 CDS Human protein_coding chr6:126080348 chr6:126080350 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_63057 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:126080329-126080365
64251 chr2 27888132 27888132 1 + G T BLCA 27888129 + 27888109 27888149 41 GGAAGATAAATGCTGGTAGCCAAGATGATGAGATGGGTTGC GGAAGATAAATGCTGGTAGCCAATATGATGAGATGGGTTGC < 41bp 0.757125796785049 0.372947336724146 0.45762852 0.16430008 prediction 0.514251593570098 Functional Loss - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27888129 chr2:27888132 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_63058 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27888096-27888132
64251 chr1 168549321 168549321 1 + G C rs56148248 168549317 + 168549297 168549337 41 CCAGGTGTAGGGAGTGAAGTCTCAGATAAGAGGACCTGTGT CCAGGTGTAGGGAGTGAAGTCTCACATAAGAGGACCTGTGT < 41bp 0.809828843948789 0.552721924670233 0.31636977 0.22891545 prediction 0.514213838557113 Functional Loss - XCL1 ENSG00000143184 CDS Human protein_coding chr1:168549317 chr1:168549321 nonsynonymous SNV 0.713 0 25 hm5C_associated_SNPs_63064 0 0 2 U2AF2 POSTAR2 ENCODE chr1:168549286-168549377
64251 chr8 27657189 27657189 1 + G T LUSC 27657187 + 27657167 27657207 41 GTAGAATCTGGGTTTTCAGACTGAAGAGAAGAAAGCGCATT GTAGAATCTGGGTTTTCAGACTTAAGAGAAGAAAGCGCATT < 41bp 0.757094474899356 0.43777055588536 0.24411082 0.27237788 prediction 0.514188949798712 Functional Loss - ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27657187 chr8:27657189 synonymous SNV . 0 23 hm5C_associated_SNPs_63068 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:27657167-27657210
64251 chr20 37580470 37580470 1 + G T UCEC 37580467 + 37580447 37580487 41 CCAGAGATGCCCGCAGAGGGCAAGGCAGAGCGCAAGCCCCA CCAGAGATGCCCGCAGAGGGCAATGCAGAGCGCAAGCCCCA < 41bp 0.757090190641578 0.374399525449216 0.23148727 0.22105324 prediction 0.514180381283157 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580467 chr20:37580470 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_63069 0 0 1 UCHL5 POSTAR2 ENCODE chr20:37580432-37580486
64251 chr2 27247084 27247084 1 + C T CESC 27247082 + 27247062 27247102 41 GGATTACAACCCTCTGCTGGCGCGGCAGGGCCAGGACGTAG GGATTACAACCCTCTGCTGGCGTGGCAGGGCCAGGACGTAG < 41bp 0.765041785370305 0.50795381244175 0.36176604 0.39455497 prediction 0.51417594585711 Functional Loss - MAPRE3 ENSG00000084764 CDS Human protein_coding chr2:27247082 chr2:27247084 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_63071 0 0 1 SRSF1 POSTAR2 ENCODE chr2:27247042-27247126
64251 chr1 78481780 78481780 1 + G T LUAD 78481777 + 78481757 78481797 41 AGTAAATGATATTGTGAAACCCGGAATGAGGAGAAGAATTA AGTAAATGATATTGTGAAACCCGTAATGAGGAGAAGAATTA < 41bp 0.757081732406181 0.403199296446705 0.18237537 0.10782203 prediction 0.514163464812363 Functional Loss - DNAJB4 ENSG00000162616 CDS Human protein_coding chr1:78481777 chr1:78481780 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63072 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:78481767-78481793
64251 chr8 57127181 57127181 1 + G T LUSC 57127178 + 57127158 57127198 41 AAGAAGACTGTTAGAATGCCCTCGGTAACACAGAGGCTGAG AAGAAGACTGTTAGAATGCCCTCTGTAACACAGAGGCTGAG < 41bp 0.757075980365647 0.381094767229131 0.12783214 0.14688423 prediction 0.514151960731294 Functional Loss - CHCHD7 ENSG00000170791 CDS Human protein_coding chr8:57127178 chr8:57127181 synonymous SNV . 0 24 hm5C_associated_SNPs_63074 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:57127157-57127184
64251 chr12 53668742 53668742 1 + G C GBM 53668738 + 53668718 53668758 41 ATGGCTGAGCCAGTCACTTTCTGGGTTCGGGTCAAGATGGA ATGGCTGAGCCAGTCACTTTCTGGCTTCGGGTCAAGATGGA < 41bp 0.828987717070844 0.571912605050117 0.86244 0.15332496 prediction 0.514150224041453 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53668738 chr12:53668742 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_63075 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:53668712-53668753
64251 chr10 99205970 99205970 1 + G C rs543170791 99205966 + 99205946 99205986 41 GCTGGCGGCGGGTCCGGGTCCGCTGCCTGGCGCTGCGGGCG GCTGGCGGCGGGTCCGGGTCCGCTCCCTGGCGCTGCGGGCG < 41bp 0.797481282707161 0.540430864275107 0.22225842 0.18790466 prediction 0.514100836864108 Functional Loss - ZDHHC16 ENSG00000171307 UTR5 Human protein_coding chr10:99205966 chr10:99205970 . . 0 25 hm5C_associated_SNPs_63081 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585675 chr10:99205941-99205974
64251 chr3 23960920 23960920 1 + C T rs576343717 23960918 + 23960898 23960938 41 TTGGAAAGGGCCACAAGTTCCACCACACTATTGGTGGCTCT TTGGAAAGGGCCACAAGTTCCATCACACTATTGGTGGCTCT < 41bp 0.757042610917798 0.489004380192827 0.18039829 0.34786826 prediction 0.514085221835596 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23960918 chr3:23960920 synonymous SNV . 0 23 hm5C_associated_SNPs_63083 0 0 36 DDX3X POSTAR2 GSE70804,GSM1819212 chr3:23960880-23960920
64251 chr5 235283 235283 1 + C T STAD 235281 + 235261 235301 41 GCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCAC GCTGTGGCCCTGAGAAAGATCATGTCTACCTGCAGCTGCAC < 41bp 0.766474605084815 0.509455402116517 0.32456976 0.23598483 prediction 0.514038405936595 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:235281 chr5:235283 synonymous SNV . 0 23 hm5C_associated_SNPs_63088 3 0 1 RPS3 POSTAR2 ENCODE chr5:235282-235385
64251 chr19 50161552 50161552 1 + A C KIRP 50161548 + 50161528 50161568 41 GTCCAGCGCTACCGCTACTTCCGCAAGCACGGTCGCAAGCC GTCCAGCGCTACCGCTACTTCCGCCAGCACGGTCGCAAGCC < 41bp 0.757010067856613 0.359137126117715 0.19234896 0.25858784 prediction 0.514020135713226 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50161548 chr19:50161552 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_63089 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50161534-50161553
64251 chr19 35523468 35523468 1 + C T READ 35523466 + 35523446 35523486 41 GGGGGCTGCGTGGAGGTGGACTCGGAGACCGAGGCCGTGTA GGGGGCTGCGTGGAGGTGGACTTGGAGACCGAGGCCGTGTA < 41bp 0.807202123411213 0.55019712099985 0.7747679 0.21333018 prediction 0.514010004822726 Functional Loss - SCN1B ENSG00000105711 CDS Human protein_coding chr19:35523466 chr19:35523468 nonsynonymous SNV 0.955 5 23 hm5C_associated_SNPs_63091 0 0 1 BUD13 POSTAR2 ENCODE chr19:35523372-35523472
64251 chr1 151237343 151237343 1 + G T UCEC 151237340 + 151237320 151237360 41 CACCGACAAGGCAAGAATCACAAGATGCGCATCATTGCCTT CACCGACAAGGCAAGAATCACAATATGCGCATCATTGCCTT < 41bp 0.910644640804281 0.653648469613517 0.8489636 0.15433112 prediction 0.513992342381528 Functional Loss - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151237340 chr1:151237343 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63093 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:151237313-151237380
64251 chr11 107879925 107879925 1 + G T rs574804198 107879923 + 107879903 107879943 41 CCTGGTGCTTGGGACGAGGTCAGCGCTGTCGGCGCGCTGCT CCTGGTGCTTGGGACGAGGTCATCGCTGTCGGCGCGCTGCT < 41bp 0.792943886783215 0.535954510300944 0.527228 0.386797 prediction 0.513978752964542 Functional Loss - CUL5 ENSG00000166266 UTR5 Human protein_coding chr11:107879923 chr11:107879925 . . 0 23 hm5C_associated_SNPs_63094 0 0 4 DHX30 POSTAR2 ENCODE chr11:107879899-107879969
64251 chr17 65733721 65733721 1 + G T BLCA 65733718 + 65733698 65733738 41 TGTCATTGGGGACACAGTAACAGGACTTCTGGAAAGGTGTA TGTCATTGGGGACACAGTAACAGTACTTCTGGAAAGGTGTA < 41bp 0.904132690538633 0.647149470996222 0.71527076 0.29729939 prediction 0.513966439084822 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65733718 chr17:65733721 nonsynonymous SNV 0.544 0 24 hm5C_associated_SNPs_63095 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65733628-65733731
64251 chr22 18566266 18566266 1 + C T BLCA 18566264 + 18566244 18566284 41 TGGATGTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAA TGGATGTGGTGGGTGCCTGGCTTCAAGACCCAGCCAATCAA < 41bp 0.756983173539938 0.453602362588078 0.93355095 0.041394323 prediction 0.513966347079877 Functional Loss - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18566264 chr22:18566266 synonymous SNV . 0 23 hm5C_associated_SNPs_63096 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:18566256-18566266
64251 chr1 6694844 6694844 1 - C A CESC 6694847 - 6694827 6694867 41 GCCCGGCCCGTGGTACCCAGCAGGTGGCACTGCAGCTCCCC GCCCGGCCCGTGGTACCCAGCAGTTGGCACTGCAGCTCCCC < 41bp 0.896459967803235 0.639492657080541 0.8002566 0.16029474 prediction 0.513934621445389 Functional Loss - DNAJC11;THAP3 ENSG00000007923 CDS Human protein_coding chr1:6694847 chr1:6694844 nonsynonymous SNV 0.082 0 24 hm5C_associated_SNPs_63098 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6694798-6694846
64251 chr16 82101832 82101832 1 + C T BLCA 82101830 + 82101810 82101850 41 TATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTT TATCTGGATGAGCTGGGCTTCATGGTATTTGCCGGAGTTTT < 41bp 0.778536545042706 0.52158928397841 0.16435102 0.17878497 prediction 0.513894522128592 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82101830 chr16:82101832 nonsynonymous SNV 0.543 1 23 hm5C_associated_SNPs_63101 0 0 2 RPS3 POSTAR2 ENCODE chr16:82101803-82101897
64251 chr19 40480313 40480313 1 + C T COAD 40480311 + 40480291 40480331 41 CACTGGTGGACGTGCTGCCCCCCGAAGCCGACAGCAGCATC CACTGGTGGACGTGCTGCCCCCTGAAGCCGACAGCAGCATC < 41bp 0.804202308455172 0.547267150878102 0.041030705 0.12159288 prediction 0.513870315154141 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480311 chr19:40480313 synonymous SNV . 0 23 hm5C_associated_SNPs_63109 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40480288-40480320
64251 chr6 160831795 160831795 1 + C T SKCM 160831793 + 160831773 160831813 41 GTCTCCCCGTTGGCTGATTACTCGGAAGAAAGGAGATAAAG GTCTCCCCGTTGGCTGATTACTTGGAAGAAAGGAGATAAAG < 41bp 0.820890518694159 0.563957491945882 0.11940879 0.14310575 prediction 0.513866053496555 Functional Loss - SLC22A3 ENSG00000146477 CDS Human protein_coding chr6:160831793 chr6:160831795 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_63111 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:160831780-160831800
64251 chrX 65393539 65393539 1 + C T HNSC 65393537 + 65393517 65393557 41 ATTCCAGAAGGCCATGCACCCACCGATGCTGACCCAGCGTG ATTCCAGAAGGCCATGCACCCATCGATGCTGACCCAGCGTG < 41bp 0.756917357666429 0.482077475515134 0.105172634 0.07946634 prediction 0.513834715332859 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65393537 chrX:65393539 nonsynonymous SNV 0.885 5 23 hm5C_associated_SNPs_63112 0 0 6 BUD13 POSTAR2 ENCODE chrX:65393503-65393564
64251 chr20 62641574 62641574 1 + C T UCEC 62641572 + 62641552 62641592 41 GCCCTCGAGCATGTTCCAAACTCGGTTCGCTTGTGGAAAGC GCCCTCGAGCATGTTCCAAACTTGGTTCGCTTGTGGAAAGC < 41bp 0.809813139667382 0.552896739985889 0.27002093 0.21061459 prediction 0.513832799362986 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62641572 chr20:62641574 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_63113 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr20:62641574-62641575
64251 chr20 17587722 17587722 1 + C T BLCA 17587720 + 17587700 17587740 41 AAGCAAATGGACCAGAAGATCTCAATCGGGCTTGTATTGCT AAGCAAATGGACCAGAAGATCTTAATCGGGCTTGTATTGCT < 41bp 0.756900425243897 0.476320612810571 0.053140253 0.0145435035 prediction 0.513800850487795 Functional Loss - DSTN ENSG00000125868 CDS Human protein_coding chr20:17587720 chr20:17587722 synonymous SNV . 0 23 hm5C_associated_SNPs_63119 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:17587688-17587747
64251 chr15 40756212 40756212 1 + C T STAD 40756210 + 40756190 40756230 41 TCTCTGCCCTCTGGGAGAACCCCGAGTCAGGTACCTCTCCC TCTCTGCCCTCTGGGAGAACCCTGAGTCAGGTACCTCTCCC < 41bp 0.796715379267245 0.539839786799823 0.9008571 0.8177528 prediction 0.513751184934845 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756210 chr15:40756212 synonymous SNV . 0 23 hm5C_associated_SNPs_63123 0 0 1 PPIG POSTAR2 ENCODE chr15:40756150-40756221
64251 chr3 101284007 101284007 1 + G T PAAD 101284005 + 101283985 101284025 41 TATGGAATGTGTTTCTAACACAGCAAAAAAAAAATATTTAA TATGGAATGTGTTTCTAACACATCAAAAAAAAAATATTTAA < 41bp 0.823435425330012 0.56656595996532 0.8396891 0.40083453 prediction 0.513738930729383 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101284005 chr3:101284007 nonsynonymous SNV 0.946 0 23 hm5C_associated_SNPs_63126 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:101284000-101284020
64251 chr7 99227118 99227118 1 + C T UCEC 99227116 + 99227096 99227136 41 TCGTCAGGCACCAGCGAACCCACGAAGAGAAGTCTTATGGC TCGTCAGGCACCAGCGAACCCATGAAGAGAAGTCTTATGGC < 41bp 0.779146926271419 0.522282197252953 0.1286385 0.15676191 prediction 0.513729458036932 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99227116 chr7:99227118 synonymous SNV . 0 23 hm5C_associated_SNPs_63128 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:99227068-99227118
64251 chr14 35482586 35482586 1 + C T LUAD 35482584 + 35482564 35482604 41 ATTGTTTATGTGATGGATGCCTCCATTGGGCAGGCTTGTGA ATTGTTTATGTGATGGATGCCTTCATTGGGCAGGCTTGTGA < 41bp 0.841954202298228 0.585103275247708 0.9556407 0.16958886 prediction 0.513701854101039 Functional Loss - SRP54 ENSG00000100883 CDS Human protein_coding chr14:35482584 chr14:35482586 nonsynonymous SNV 0.991 2 23 hm5C_associated_SNPs_63131 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378376 chr14:35482580-35482600
64251 chr1 151260136 151260136 1 + G T STAD 151260134 + 151260114 151260154 41 GCCTAAGGCTGACGGGCGGGCAGGGCTGGGGACTGGGGGAC GCCTAAGGCTGACGGGCGGGCATGGCTGGGGACTGGGGGAC < 41bp 0.893504211123872 0.636661964540346 0.8833973 0.76276 prediction 0.513684493167052 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151260134 chr1:151260136 nonsynonymous SNV 0.907 2 23 hm5C_associated_SNPs_63133 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:151260120-151260140
64251 chr3 52526372 52526372 1 + G T rs117164680 52526370 + 52526350 52526390 41 GTGGCCCGGCTAGAGCCAGCCAGGGCCGTGAAGTCCAGTGG GTGGCCCGGCTAGAGCCAGCCATGGCCGTGAAGTCCAGTGG < 41bp 0.756841704807786 0.404565359320069 0.9031105 0.4508714 prediction 0.513683409615572 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526370 chr3:52526372 nonsynonymous SNV 0.906 1 23 hm5C_associated_SNPs_63134 0 0 1 EIF3H POSTAR2 ENCODE chr3:52526331-52526393
64251 chr6 27776343 27776343 1 + A C UCEC 27776339 + 27776319 27776359 41 ACATCCAGGCCGTGCTACTGCCCAAGAAGACCGAGAGCCAC ACATCCAGGCCGTGCTACTGCCCACGAAGACCGAGAGCCAC < 41bp 0.75683223202555 0.374334676508424 0.041443944 0.016474873 prediction 0.513664464051101 Functional Loss - HIST1H2AI ENSG00000196747 CDS Human protein_coding chr6:27776339 chr6:27776343 nonsynonymous SNV 0.970 2 25 hm5C_associated_SNPs_63135 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27776300-27776437
64251 chr11 120096498 120096498 1 + C T LUSC 120096496 + 120096476 120096516 41 CCAGTGAGGCCATGGCCAAGCTCCGGCAGGTAAGTGCCCCA CCAGTGAGGCCATGGCCAAGCTTCGGCAGGTAAGTGCCCCA < 41bp 0.775866389997718 0.519036999497211 0.30726147 0.22377038 prediction 0.513658781001012 Functional Loss - OAF ENSG00000184232 CDS Human protein_coding chr11:120096496 chr11:120096498 synonymous SNV . 0 23 hm5C_associated_SNPs_63136 0 0 3 GRWD1 POSTAR2 ENCODE chr11:120096453-120096506
64251 chr17 72791704 72791704 1 + C T SKCM 72791702 + 72791682 72791722 41 TCCTGCGGTGTGGAAGCAGACACCAAATACAATGACACTGA TCCTGCGGTGTGGAAGCAGACATCAAATACAATGACACTGA < 41bp 0.816909106799497 0.560089160668299 0.14576799 0.09201607 prediction 0.513639892262395 Functional Loss - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72791702 chr17:72791704 nonsynonymous SNV 0.712 0 23 hm5C_associated_SNPs_63137 0 0 1 SND1 POSTAR2 ENCODE chr17:72791703-72791759
64251 chrX 55757893 55757893 1 + C T COAD 55757891 + 55757871 55757911 41 ATGTCTTTGATGTGGAGAGCCGCGAACTGGAAAAGGACATG ATGTCTTTGATGTGGAGAGCCGTGAACTGGAAAAGGACATG < 41bp 0.820836981128399 0.564021099680913 0.13104653 0.11885953 prediction 0.513631762894971 Functional Loss - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55757891 chrX:55757893 synonymous SNV . 0 23 hm5C_associated_SNPs_63140 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:55757868-55757898
64251 chr7 75612939 75612939 1 + C T HNSC 75612937 + 75612917 75612957 41 ATGCACCTGGAATTGGACATCTCGGACTCCAAAATCAGGTA ATGCACCTGGAATTGGACATCTTGGACTCCAAAATCAGGTA < 41bp 0.791475933266147 0.534661269843003 0.251225 0.033901423 prediction 0.513629326846289 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75612937 chr7:75612939 nonsynonymous SNV 0.709 3 23 hm5C_associated_SNPs_63142 0 0 2 DDX24 POSTAR2 ENCODE chr7:75612882-75612955
64251 chr12 56619181 56619181 1 + G T GBM 56619179 + 56619159 56619199 41 CGAGTGACCAAGACAAAGGACGGGCATGAGGTTCGGACCTG CGAGTGACCAAGACAAAGGACGTGCATGAGGTTCGGACCTG < 41bp 0.756814002052857 0.416923339886773 0.33120733 0.091738105 prediction 0.513628004105714 Functional Loss - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56619179 chr12:56619181 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63143 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:56619168-56619200
64251 chr2 3447586 3447586 1 + C T CESC 3447584 + 3447564 3447604 41 TTCTCGATGCGCATCTTGCACGCGGAGCTTCAGCAGTACCT TTCTCGATGCGCATCTTGCACGTGGAGCTTCAGCAGTACCT < 41bp 0.788631149645801 0.531856286909633 0.20177838 0.25355136 prediction 0.513549725472336 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3447584 chr2:3447586 nonsynonymous SNV 0.812 4 23 hm5C_associated_SNPs_63154 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:3447583-3447613
64251 chr2 27726437 27726437 1 + A C rs147073127 27726436 + 27726416 27726456 41 GACAAGTAGCAGAGCGGATGCAGAAAATGCAGGAGAAACAG GACAAGTAGCAGAGCGGATGCCGAAAATGCAGGAGAAACAG < 41bp 0.756765591341881 0.497631528223111 0.87279403 0.47637197 prediction 0.513531182683762 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27726436 chr2:27726437 nonsynonymous SNV 0.965 0 22 hm5C_associated_SNPs_63159 0 0 1 PPIG POSTAR2 ENCODE chr2:27726400-27726445
64251 chr18 29617199 29617199 1 + A C UCEC 29617198 + 29617178 29617218 41 TGTAGCCAAAAGAATGAAATCAGAGTATAAGAACTGCGCTG TGTAGCCAAAAGAATGAAATCCGAGTATAAGAACTGCGCTG < 41bp 0.770084392003224 0.513319245830224 0.78256637 0.39029622 prediction 0.513530292345999 Functional Loss - RNF125 ENSG00000101695 CDS Human protein_coding chr18:29617198 chr18:29617199 synonymous SNV . 0 22 hm5C_associated_SNPs_63160 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:29617187-29617213
64251 chr10 5948284 5948284 1 + C T HNSC 5948282 + 5948262 5948302 41 GGATGGAGTTTCTAAGAAAGCTCCACGGCACCATTTGTCTG GGATGGAGTTTCTAAGAAAGCTTCACGGCACCATTTGTCTG < 41bp 0.795403665899589 0.538647014032993 0.8188399 0.05378139 prediction 0.513513303733192 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948282 chr10:5948284 nonsynonymous SNV 0.009 0 23 hm5C_associated_SNPs_63162 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:5948282-5948309
64251 chr1 229770775 229770775 1 + T C COAD 229770774 + 229770754 229770794 41 ACACCTGCCCTGGCTGTCATCTACACGGCCAAACAGGAGCT ACACCTGCCCTGGCTGTCATCCACACGGCCAAACAGGAGCT < 41bp 0.756746775193864 0.498980713255492 0.34866297 0.109534204 prediction 0.513493550387728 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770774 chr1:229770775 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_63164 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:229770753-229770780
64251 chr15 64747223 64747223 1 + G C BLCA 64747219 + 64747199 64747239 41 AATTGGATTCCAAGATCCATCAAGGAGCAAAGAAGGGGTTA AATTGGATTCCAAGATCCATCAAGCAGCAAAGAAGGGGTTA < 41bp 0.775898871177908 0.519170950377572 0.76742846 0.30668858 prediction 0.513455841600671 Functional Loss - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64747219 chr15:64747223 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_63171 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:64747220-64747242
64251 chr17 1679937 1679937 1 + G T BLCA 1679934 + 1679914 1679954 41 GCCTCACCTCCGAGTTCATTCATGACATAGACCGAGAACTG GCCTCACCTCCGAGTTCATTCATTACATAGACCGAGAACTG < 41bp 0.756707254574637 0.372200311499598 0.16869578 0.061071724 prediction 0.513414509149274 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1679934 chr17:1679937 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_63174 0 0 5 LIN28B POSTAR2 ENCODE chr17:1679889-1679998
64251 chr11 93431732 93431732 1 + G T CESC 93431730 + 93431710 93431750 41 TGGATGAATCTGAGAGATTCCAGGAATGTATATCAATCAAG TGGATGAATCTGAGAGATTCCATGAATGTATATCAATCAAG < 41bp 0.756701679551461 0.431323788603268 0.35660237 0.10106012 prediction 0.513403359102922 Functional Loss - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93431730 chr11:93431732 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_63176 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:93431706-93431747
64251 chr1 45479499 45479499 1 + G C rs2234480 45479495 + 45479475 45479515 41 CAGGGCAGGGACTCGGGGCGCGGGGAGATCACTCTGGAAGG CAGGGCAGGGACTCGGGGCGCGGGCAGATCACTCTGGAAGG < 41bp 0.837410715795173 0.580712358687083 0.91791105 0.9051422 prediction 0.513396714216179 Functional Loss - UROD ENSG00000126088 intronic Human protein_coding chr1:45479495 chr1:45479499 . . 0 25 hm5C_associated_SNPs_63177 0 0 4 DDX24 POSTAR2 ENCODE chr1:45479467-45479512
64251 chr19 50885782 50885782 1 + G T LUSC 50885780 + 50885760 50885800 41 CACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTCGCCTTGC CACGCTGAGCTCTGTGCACTCGTAGCAGGTCTTCGCCTTGC < 41bp 0.874821387952491 0.618123032425344 0.9245223 0.54026634 prediction 0.513396711054294 Functional Loss - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50885780 chr19:50885782 stopgain 1.000 0 23 hm5C_associated_SNPs_63178 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:50885771-50885814
64251 chr2 173451074 173451074 1 + T C rs36014095 173451073 + 173451053 173451093 41 TTTCAACTACATGTATTCAACTGCACCAAGACCTCGTGTTG TTTCAACTACATGTATTCAACCGCACCAAGACCTCGTGTTG < 41bp 0.756679911147231 0.497318854650057 0.03684196 0.03725809 prediction 0.513359822294463 Functional Loss - PDK1 ENSG00000152256 CDS Human protein_coding chr2:173451073 chr2:173451074 synonymous SNV . 0 22 hm5C_associated_SNPs_63182 0 0 4 DGCR8 POSTAR2 ENCODE chr2:173451027-173451076
64251 chr11 212645 212645 1 + C T GBM 212643 + 212623 212663 41 CCCTCTGCGGGATGTGAGGACACGGCCTGAGGTTGGGGAGA CCCTCTGCGGGATGTGAGGACATGGCCTGAGGTTGGGGAGA < 41bp 0.771407735212137 0.514735734330484 0.19279325 0.24678305 prediction 0.513344001763305 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:212643 chr11:212645 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_63184 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:212641-212662
64251 chr17 43226734 43226734 1 + G T KIRC 43226732 + 43226712 43226752 41 TCCCCCAGTTGGGTGGCCGTCCGGGGCCGGAGGGGGAAGGG TCCCCCAGTTGGGTGGCCGTCCTGGGCCGGAGGGGGAAGGG < 41bp 0.893864899301527 0.637206072144939 0.909714 0.7875068 prediction 0.513317654313175 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226732 chr17:43226734 synonymous SNV . 0 23 hm5C_associated_SNPs_63189 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:43226720-43226740
64251 chr16 28883599 28883599 1 + G T SARC 28883597 + 28883577 28883617 41 GGTTCCACGGGATGCTCTCTCGGCTCAAGGCTGCACAGTTG GGTTCCACGGGATGCTCTCTCGTCTCAAGGCTGCACAGTTG < 41bp 0.756613678590734 0.414005178927998 0.7590542 0.2657634 prediction 0.513227357181469 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883597 chr16:28883599 synonymous SNV . 0 23 hm5C_associated_SNPs_63197 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:28883590-28883614
64251 chr7 156746931 156746931 1 + G T UCEC 156746929 + 156746909 156746949 41 GTCACTGCCTCGGCCATGCCCAGCAGACTGATGATGGAGCA GTCACTGCCTCGGCCATGCCCATCAGACTGATGATGGAGCA < 41bp 0.885179182638469 0.628574599036666 0.40764478 0.1814264 prediction 0.513209167203606 Functional Loss - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746929 chr7:156746931 nonsynonymous SNV 0.854 1 23 hm5C_associated_SNPs_63200 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:156746926-156746954
64251 chr17 42429029 42429029 1 + C T SKCM 42429027 + 42429007 42429047 41 GGTGCCCTGGATGGAGAAGGCCCCAGCTCACCTCAGCCTGC GGTGCCCTGGATGGAGAAGGCCTCAGCTCACCTCAGCCTGC < 41bp 0.768272748650146 0.511668549768244 0.10816154 0.06715599 prediction 0.513208397763803 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42429027 chr17:42429029 nonsynonymous SNV 0.039 0 23 hm5C_associated_SNPs_63201 0 0 4 DDX55 POSTAR2 ENCODE chr17:42428963-42429038
64251 chr15 43627977 43627977 1 + C T STAD 43627975 + 43627955 43627995 41 AGAAGCCAGATCTTAAAATCCACGATCAGATGACTGTGATT AGAAGCCAGATCTTAAAATCCATGATCAGATGACTGTGATT < 41bp 0.809635932613088 0.553041837038486 0.01708594 0.017371178 prediction 0.513188191149202 Functional Loss - ADAL ENSG00000168803 CDS Human protein_coding chr15:43627975 chr15:43627977 synonymous SNV . 0 23 hm5C_associated_SNPs_63203 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:43627970-43627996
64251 chr17 26370206 26370206 1 + C T SKCM 26370204 + 26370184 26370224 41 ATCACCGGCACCGGGGCAGGCTCCTGGACCAGCTGCAGCAG ATCACCGGCACCGGGGCAGGCTTCTGGACCAGCTGCAGCAG < 41bp 0.756593422411134 0.492910009465894 0.23612577 0.14747345 prediction 0.513186844822269 Functional Loss - NLK ENSG00000087095 CDS Human protein_coding chr17:26370204 chr17:26370206 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63204 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr17:26370194-26370215
64251 chrX 103411570 103411570 1 + G C LUAD 103411566 + 103411546 103411586 41 CTCGCGGGGTGGGCACCTGCCCGAGCGAGGAGCCGGGCTGC CTCGCGGGGTGGGCACCTGCCCGACCGAGGAGCCGGGCTGC < 41bp 0.797168946397012 0.54058066258349 0.5780346 0.06352556 prediction 0.513176567627043 Functional Loss - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103411566 chrX:103411570 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_63207 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103411536-103411574
64251 chr9 131233667 131233667 1 + C T COAD 131233665 + 131233645 131233685 41 AAGAGCTGGAGGAGGTGGCCCACGAACTGGCTGAGACTGAG AAGAGCTGGAGGAGGTGGCCCATGAACTGGCTGAGACTGAG < 41bp 0.765901512875002 0.509319269453801 0.10034785 0.2132506 prediction 0.513164486842401 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131233665 chr9:131233667 synonymous SNV . 0 23 hm5C_associated_SNPs_63208 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:131233649-131233673
64251 chr4 25419839 25419839 1 + C T COAD 25419837 + 25419817 25419857 41 ACATAGATGATGAATGGGAGCTCGATGAGTCTTCAGATGAA ACATAGATGATGAATGGGAGCTTGATGAGTCTTCAGATGAA < 41bp 0.799339170222178 0.542757137976108 0.15933126 0.21726507 prediction 0.51316406449214 Functional Loss - ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25419837 chr4:25419839 synonymous SNV . 0 23 hm5C_associated_SNPs_63209 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr4:25419784-25419871
64251 chr1 54417865 54417865 1 + C T UCEC 54417863 + 54417843 54417883 41 GAACAGGGAAGACGACACTGCACGGAAAGAGAAGACTGATC GAACAGGGAAGACGACACTGCATGGAAAGAGAAGACTGATC < 41bp 0.756576395949273 0.49881331480151 0.058998197 0.06301993 prediction 0.513152791898545 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54417863 chr1:54417865 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_63211 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:54417864-54417882
64251 chr1 54417866 54417866 1 + G T UCEC 54417863 + 54417843 54417883 41 GAACAGGGAAGACGACACTGCACGGAAAGAGAAGACTGATC GAACAGGGAAGACGACACTGCACTGAAAGAGAAGACTGATC < 41bp 0.756576395949273 0.361115628243189 0.058998197 0.006156385 prediction 0.513152791898545 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54417863 chr1:54417866 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_63212 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:54417864-54417882
64251 chr11 70194401 70194401 1 + T C UCEC 70194400 + 70194380 70194420 41 GGTCGTTTTAGATCAATGAGCTCCATTCCCCCCTACCCTGC GGTCGTTTTAGATCAATGAGCCCCATTCCCCCCTACCCTGC < 41bp 0.762800782771909 0.506228916190643 0.8571389 0.13796231 prediction 0.513143733162531 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70194400 chr11:70194401 nonsynonymous SNV 0.305 2 22 hm5C_associated_SNPs_63213 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70194387-70194402
64251 chr8 81431635 81431635 1 + C T LUSC 81431633 + 81431613 81431653 41 GGGACAGGATACAGAATTCCCTCGGGATGAAGAATACGAGG GGGACAGGATACAGAATTCCCTTGGGATGAAGAATACGAGG < 41bp 0.764387793010244 0.507844214163555 0.12004429 0.20911607 prediction 0.513087157693377 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81431633 chr8:81431635 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63222 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:81431600-81431638
64251 chr19 16982140 16982140 1 + C T LUSC 16982138 + 16982118 16982158 41 CGCAGTACGAGGACACCCTACGCGAGATGTTCACCATCCAT CGCAGTACGAGGACACCCTACGTGAGATGTTCACCATCCAT < 41bp 0.756542966588627 0.477656776729091 0.26500615 0.18869197 prediction 0.513085933177253 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16982138 chr19:16982140 synonymous SNV . 0 23 hm5C_associated_SNPs_63223 0 0 2 SRSF1 POSTAR2 ENCODE chr19:16982043-16982163
64251 chr20 29612334 29612334 1 + G T rs527831038 29612331 + 29612311 29612351 41 CTGGAAACAGGATAGACGGGCGGGTGACCCGTGGCCCCGTA CTGGAAACAGGATAGACGGGCGGTTGACCCGTGGCCCCGTA < 41bp 0.756539424794462 0.368293072607513 0.88333464 0.369336 prediction 0.513078849588924 Functional Loss - FRG1BP;FRG1DP ENSG00000149531 intronic Human unprocessed_pseudogene chr20:29612331 chr20:29612334 . . 0 24 hm5C_associated_SNPs_63224 0 0 1 BUD13 POSTAR2 ENCODE chr20:29612211-29612343
64251 chr21 34922804 34922804 1 + C T LUAD 34922802 + 34922782 34922822 41 GTTGCCAGGGCCCCTTTCTACCCCAGTGCCTGAGTTGCCAG GTTGCCAGGGCCCCTTTCTACCTCAGTGCCTGAGTTGCCAG < 41bp 0.756526354941967 0.491863153534393 0.31819165 0.12549928 prediction 0.513052709883934 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922802 chr21:34922804 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_63229 0 0 31 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34922605-34922946
64251 chr19 50156636 50156636 1 + G T SARC 50156634 + 50156614 50156654 41 CCGGACTCGCAGACCGTGGACAGCAGCTGCAAGACACCTGA CCGGACTCGCAGACCGTGGACATCAGCTGCAAGACACCTGA < 41bp 0.756517281065928 0.420971831052563 0.75029194 0.35653573 prediction 0.513034562131856 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50156634 chr19:50156636 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63231 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50156605-50156637
64251 chr22 39917481 39917481 1 + G C LUSC 39917477 + 39917457 39917497 41 GAAATGAGCTTCCTGAGCAGCGAGGTGTTGGTGGGGGACTT GAAATGAGCTTCCTGAGCAGCGAGCTGTTGGTGGGGGACTT < 41bp 0.808112653363769 0.551595727905661 0.8203366 0.3732206 prediction 0.513033850916216 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917477 chr22:39917481 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_63232 0 0 29 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39917441-39917498
64251 chr20 42199368 42199368 1 + A C LUSC 42199367 + 42199347 42199387 41 CACTCCCTCAACATCATTTACAGGTGAGGCCTGCCTGTGGC CACTCCCTCAACATCATTTACCGGTGAGGCCTGCCTGTGGC < 41bp 0.78093336067369 0.524419670774436 0.4354547 0.2389107 prediction 0.513027379798508 Functional Loss - SGK2 ENSG00000101049 CDS Human protein_coding chr20:42199367 chr20:42199368 synonymous SNV . 0 22 hm5C_associated_SNPs_63233 0 0 2 PRPF8 POSTAR2 ENCODE chr20:42199339-42199413
64251 chr16 90106791 90106791 1 + C T BLCA 90106789 + 90106769 90106809 41 AGAAGACAGGGTTCAAGAACCTCGTGCTAGAACGCAAGCTG AGAAGACAGGGTTCAAGAACCTTGTGCTAGAACGCAAGCTG < 41bp 0.786000184459495 0.529504127940179 0.39423418 0.34644645 prediction 0.512992113038634 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90106789 chr16:90106791 synonymous SNV . 0 23 hm5C_associated_SNPs_63236 0 0 2 GRWD1 POSTAR2 ENCODE chr16:90106780-90106852
64251 chr3 50147061 50147061 1 + G C LUSC 50147057 + 50147037 50147077 41 CACAGCAGTGACCACCACCTCAGCGGCTGTAGTGTCCCAGA CACAGCAGTGACCACCACCTCAGCCGCTGTAGTGTCCCAGA < 41bp 0.75648953278677 0.47301620812458 0.42615137 0.23618934 prediction 0.51297906557354 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50147057 chr3:50147061 synonymous SNV . 0 25 hm5C_associated_SNPs_63238 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:50147046-50147068
64251 chr19 57803407 57803407 1 + G T LUSC 57803405 + 57803385 57803425 41 AAGGCACCAGCGGATTCACACTGCAGAGAAGTCCCACGAAC AAGGCACCAGCGGATTCACACTTCAGAGAAGTCCCACGAAC < 41bp 0.869212613435198 0.61273371153868 0.2655235 0.056884944 prediction 0.512957803793036 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57803405 chr19:57803407 nonsynonymous SNV 0.028 1 23 hm5C_associated_SNPs_63239 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57803385-57803428
64251 chr12 104378584 104378584 1 + G T GBM 104378581 + 104378561 104378601 41 GTGCTCAGTTTCCTCGAGCCCAAGACAAAGTTCATTACTAC GTGCTCAGTTTCCTCGAGCCCAATACAAAGTTCATTACTAC < 41bp 0.756470684846947 0.383788116916428 0.32969606 0.1650973 prediction 0.512941369693894 Functional Loss - TDG ENSG00000139372 CDS Human protein_coding chr12:104378581 chr12:104378584 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63243 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:104378556-104378590
64251 chr1 244868943 244868943 1 + C T UCEC 244868941 + 244868921 244868961 41 CCCTTTCTACAGAGTTGCCTCCCGAAGGAGTGGCTCACGCC CCCTTTCTACAGAGTTGCCTCCTGAAGGAGTGGCTCACGCC < 41bp 0.793421903189095 0.536953644951968 0.32609984 0.09279421 prediction 0.512936516474254 Functional Loss - DESI2 ENSG00000121644 CDS Human protein_coding chr1:244868941 chr1:244868943 nonsynonymous SNV 0.938 3 23 hm5C_associated_SNPs_63245 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:244868900-244869060
64251 chr18 10540342 10540342 1 + G C HNSC 10540341 + 10540321 10540361 41 TTCAGAATGAAGAACGCTTACGACAGGCAGTTGAATTACTA TTCAGAATGAAGAACGCTTACCACAGGCAGTTGAATTACTA < 41bp 0.756462235330085 0.455203524856901 0.19687149 0.1622192 prediction 0.51292447066017 Functional Loss - NAPG ENSG00000134265 CDS Human protein_coding chr18:10540341 chr18:10540342 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_63246 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr18:10540330-10540350
64251 chrX 15841214 15841214 1 + G T LUAD 15841212 + 15841192 15841232 41 AATAGGGACCGCAGCAGGGACCGCAGCCGGGGCCGGGGCAG AATAGGGACCGCAGCAGGGACCTCAGCCGGGGCCGGGGCAG < 41bp 0.877472666267454 0.621013807518939 0.37543255 0.23170719 prediction 0.512917717497031 Functional Loss - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15841212 chrX:15841214 nonsynonymous SNV 0.019 2 23 hm5C_associated_SNPs_63247 0 0 2 DGCR8 POSTAR2 ENCODE chrX:15841209-15841253
64251 chr6 27783112 27783112 1 + G C CESC 27783111 + 27783091 27783131 41 CACTTCGAGGGAGATCCAGACGGCCGTGCGCCTACTGCTAC CACTTCGAGGGAGATCCAGACCGCCGTGCGCCTACTGCTAC < 41bp 0.819169590832758 0.562711402909033 0.48641163 0.3088661 prediction 0.512916375847449 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783111 chr6:27783112 synonymous SNV . 0 22 hm5C_associated_SNPs_63248 0 0 3 EIF3D POSTAR2 ENCODE chr6:27783103-27783168
64251 chr6 26217568 26217568 1 + G C BLCA 26217564 + 26217544 26217584 41 CGTATTGCTGCCTAAGAAGACGGAGAGCCACCATAAGGCCA CGTATTGCTGCCTAAGAAGACGGACAGCCACCATAAGGCCA < 41bp 0.771069997697329 0.51461311588247 0.20974293 0.054579377 prediction 0.512913763629719 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217564 chr6:26217568 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_63250 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26217560-26217580
64251 chr13 113783899 113783899 1 + C T STAD 113783897 + 113783877 113783917 41 CCTGCTCATACGAAGAGGCCCGCGAGGTCTTTGAGGACAGC CCTGCTCATACGAAGAGGCCCGTGAGGTCTTTGAGGACAGC < 41bp 0.786574146275446 0.530136796152924 0.35665125 0.28269565 prediction 0.512874700245043 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113783897 chr13:113783899 synonymous SNV . 0 23 hm5C_associated_SNPs_63255 0 0 2 GRWD1 POSTAR2 ENCODE chr13:113783869-113783901
64251 chr3 40502907 40502907 1 + G T SARC 40502905 + 40502885 40502925 41 TGGCTCGTTCTAGTGCCCACCAGAAGTATGTCCGACAAGCC TGGCTCGTTCTAGTGCCCACCATAAGTATGTCCGACAAGCC < 41bp 0.756422293727106 0.4164529445262 0.73651284 0.1154539 prediction 0.512844587454213 Functional Loss - RPL14 ENSG00000188846 CDS Human protein_coding chr3:40502905 chr3:40502907 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_63257 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:40502864-40502920
64251 chr7 26192080 26192080 1 + G T rs529234257 26192077 + 26192057 26192097 41 CGGCGGCTGGGGCGCCGGGACCCGCGGGCGCCGGCAGGGGC CGGCGGCTGGGGCGCCGGGACCCTCGGGCGCCGGCAGGGGC < 41bp 0.781253746106543 0.52486629044139 0.81067634 0.3824683 prediction 0.512774911330306 Functional Loss - NFE2L3 ENSG00000050344 UTR5 Human protein_coding chr7:26192077 chr7:26192080 . . 0 24 hm5C_associated_SNPs_63264 0 0 7 DDX3X POSTAR2 ENCODE chr7:26191998-26192159
64251 chr10 13151183 13151183 1 + G C OV 13151179 + 13151159 13151199 41 GAGGACAGCCCCAGTGAAAGCACAGGAAATGGACCCCCCCA GAGGACAGCCCCAGTGAAAGCACACGAAATGGACCCCCCCA < 41bp 0.812754202231786 0.556370451237131 0.708565 0.22661936 prediction 0.512767501989309 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13151179 chr10:13151183 nonsynonymous SNV 0.959 5 25 hm5C_associated_SNPs_63265 0 0 2 GRWD1 POSTAR2 ENCODE chr10:13151111-13151186
64251 chr2 122514890 122514890 1 + G T LUSC 122514888 + 122514868 122514908 41 CTCTACTGCAAGGGGTCCATCAGGGTGCTGGGTTTCAGGAC CTCTACTGCAAGGGGTCCATCATGGTGCTGGGTTTCAGGAC < 41bp 0.807092786307409 0.550709381137368 0.94487375 0.58643305 prediction 0.512766810340082 Functional Loss - TSN ENSG00000211460 CDS Human protein_coding chr2:122514888 chr2:122514890 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_63266 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:122514860-122514890
64251 chr20 2841211 2841211 1 + C T SKCM 2841209 + 2841189 2841229 41 TCAGTGCCAATGTGGGTGACCTCAAACTCCGCCGGATGCCA TCAGTGCCAATGTGGGTGACCTTAAACTCCGCCGGATGCCA < 41bp 0.756373711511839 0.470975319777563 0.43799463 0.20807546 prediction 0.512747423023678 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2841209 chr20:2841211 synonymous SNV . 0 23 hm5C_associated_SNPs_63269 0 0 1 PPIG POSTAR2 ENCODE chr20:2841209-2841237
64251 chr5 904309 904309 1 + G T COAD 904307 + 904287 904327 41 CCCTGTGTAAAGCGTTAGCCCAGAAATTGACAATTAGACTT CCCTGTGTAAAGCGTTAGCCCATAAATTGACAATTAGACTT < 41bp 0.756363144175637 0.422464508053821 0.08311489 0.07450804 prediction 0.512726288351275 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:904307 chr5:904309 nonsynonymous SNV 0.912 2 23 hm5C_associated_SNPs_63272 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:904279-904310
64251 chr6 111196351 111196351 1 + G T COAD 111196348 + 111196328 111196368 41 TCGAAGGGACCGAGAAGCTGCTGGAGGTTTGGTTCTCCCGG TCGAAGGGACCGAGAAGCTGCTGTAGGTTTGGTTCTCCCGG < 41bp 0.897837720101106 0.641476604423932 0.892251 0.35863593 prediction 0.512722231354348 Functional Loss - AMD1 ENSG00000123505 CDS Human protein_coding chr6:111196348 chr6:111196351 stopgain 1.000 1 24 hm5C_associated_SNPs_63275 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:111196250-111196354
64251 chr9 91083295 91083295 1 + C T COAD 91083293 + 91083273 91083313 41 TTTTTAATCCCCAGCGACATCTCGAATCAGCGATGCACACT TTTTTAATCCCCAGCGACATCTTGAATCAGCGATGCACACT < 41bp 0.831740729613386 0.575382413570137 0.8648747 0.089870155 prediction 0.512716632086498 Functional Loss - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91083293 chr9:91083295 stopgain 0.612 0 23 hm5C_associated_SNPs_63276 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr9:91083277-91083298
64251 chr2 99172180 99172180 1 + G T ESCA 99172177 + 99172157 99172197 41 AACCCGGACAGCCACGCCTACTGGATCAGACCAGAAGACCC AACCCGGACAGCCACGCCTACTGTATCAGACCAGAAGACCC < 41bp 0.756357227779785 0.375020107349542 0.1286771 0.022242427 prediction 0.51271445555957 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99172177 chr2:99172180 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63277 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:99172155-99172193
64251 chr1 244538689 244538689 1 + C T OV 244538687 + 244538667 244538707 41 GCTCTAGTATATTCATCGCTCACCAAGGAAGAGACGTTCAA GCTCTAGTATATTCATCGCTCATCAAGGAAGAGACGTTCAA < 41bp 0.804033736390597 0.547696248449097 0.15891197 0.18067408 prediction 0.512674975883 Functional Loss - C1orf100 ENSG00000173728 CDS Human protein_coding chr1:244538687 chr1:244538689 synonymous SNV . 0 23 hm5C_associated_SNPs_63283 0 0 1 ZNF622 POSTAR2 ENCODE chr1:244538673-244538772
64251 chr19 41265428 41265428 1 + C T SKCM 41265426 + 41265406 41265446 41 GCAAGCGGGAGAAGAGGAAGCCCAAGAGCCAGGAGACCCCG GCAAGCGGGAGAAGAGGAAGCCTAAGAGCCAGGAGACCCCG < 41bp 0.781951070440254 0.525617571896358 0.832585 0.45689616 prediction 0.512666997087793 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41265426 chr19:41265428 synonymous SNV . 0 23 hm5C_associated_SNPs_63287 0 0 13 BUD13 POSTAR2 ENCODE chr19:41265394-41265450
64251 chr1 11810281 11810281 1 + G T HNSC 11810279 + 11810259 11810299 41 CGCTGCGCCCGGCCCTGCCCCGGGCCTTCCTCGTGCCTGGG CGCTGCGCCCGGCCCTGCCCCGTGCCTTCCTCGTGCCTGGG < 41bp 0.756327908610823 0.423699222724898 0.8925321 0.40549293 prediction 0.512655817221646 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810279 chr1:11810281 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_63288 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:11810252-11810342
64251 chr1 11810282 11810282 1 + G T PRAD 11810279 + 11810259 11810299 41 CGCTGCGCCCGGCCCTGCCCCGGGCCTTCCTCGTGCCTGGG CGCTGCGCCCGGCCCTGCCCCGGTCCTTCCTCGTGCCTGGG < 41bp 0.756327908610823 0.36218497141118 0.8925321 0.41607028 prediction 0.512655817221646 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810279 chr1:11810282 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_63289 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:11810252-11810342
64251 chr7 73731993 73731993 1 + G T UCEC 73731990 + 73731970 73732010 41 GCGGCGGTGGCCGCTAGCTCCAAGGAAGGTACGTGGCACAC GCGGCGGTGGCCGCTAGCTCCAATGAAGGTACGTGGCACAC < 41bp 0.756325546677012 0.357413257130723 0.7672372 0.060691148 prediction 0.512651093354023 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73731990 chr7:73731993 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_63290 0 0 4 EIF3H POSTAR2 ENCODE chr7:73731952-73731997
64251 chr2 70039823 70039823 1 + C T STAD 70039821 + 70039801 70039841 41 GAAATTATCTGGACGATGCTCTCGTGAGACAGGATGCCCAG GAAATTATCTGGACGATGCTCTTGTGAGACAGGATGCCCAG < 41bp 0.813641913206176 0.557322764086549 0.117729425 0.10557547 prediction 0.512638298239255 Functional Loss - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70039821 chr2:70039823 synonymous SNV . 0 23 hm5C_associated_SNPs_63291 0 0 4 GRWD1 POSTAR2 ENCODE chr2:70039787-70039842
64251 chr3 100455497 100455497 1 + C T CESC 100455495 + 100455475 100455515 41 CTCCTCCTCAGCAGCTCACCCACCAGGCGTTCAGCCACAGC CTCCTCCTCAGCAGCTCACCCATCAGGCGTTCAGCCACAGC < 41bp 0.829347528137023 0.573029825526616 0.17939517 0.12709093 prediction 0.512635405220814 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100455495 chr3:100455497 nonsynonymous SNV 0.985 2 23 hm5C_associated_SNPs_63293 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:100455453-100455546
64251 chr21 17163920 17163920 1 + G T LUSC 17163918 + 17163898 17163938 41 ACCCTTATGATAGAAAAAGACAGGACAAAGCTCCCGTTGGG ACCCTTATGATAGAAAAAGACATGACAAAGCTCCCGTTGGG < 41bp 0.873129142578143 0.616813943927911 0.5598485 0.14760625 prediction 0.512630397300463 Functional Loss - USP25 ENSG00000155313 CDS Human protein_coding chr21:17163918 chr21:17163920 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_63294 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr21:17163908-17163929
64251 chr2 200820957 200820957 1 + G C BLCA 200820956 + 200820936 200820976 41 TTCAGCATCACAGAGTTCTCCGAGGGAGCGAAGCAGGTTTG TTCAGCATCACAGAGTTCTCCCAGGGAGCGAAGCAGGTTTG < 41bp 0.847867913686766 0.591554781386238 0.92078984 0.5543699 prediction 0.512626264601056 Functional Loss - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820956 chr2:200820957 nonsynonymous SNV 0.878 0 22 hm5C_associated_SNPs_63296 0 0 1 PPIG POSTAR2 ENCODE chr2:200820856-200820957
64251 chr12 118574086 118574086 1 + G C BRCA 118574085 + 118574065 118574105 41 GGACGAGCAGCCGCAGCACCCGCTGCATGTCACCTACGCCG GGACGAGCAGCCGCAGCACCCCCTGCATGTCACCTACGCCG < 41bp 0.841207447640425 0.584895510664702 0.27802685 0.13473877 prediction 0.512623873951447 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118574085 chr12:118574086 synonymous SNV . 0 22 hm5C_associated_SNPs_63297 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:118574031-118574095
64251 chr1 212459602 212459602 1 + G T UCEC 212459600 + 212459580 212459620 41 AGTTTCGCAGCCAGGGCAGCCAGGCAGAGCTGCACCCGCTG AGTTTCGCAGCCAGGGCAGCCATGCAGAGCTGCACCCGCTG < 41bp 0.882046360120189 0.625736654786209 0.7839504 0.16732737 prediction 0.512619410667959 Functional Loss - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212459600 chr1:212459602 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_63300 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:212459602-212459603
64251 chr1 107599740 107599740 1 + G T LUAD 107599737 + 107599717 107599757 41 ACGGGCTGGAGGACCGGGTGCACGTCCTGCCGGGACCAGTG ACGGGCTGGAGGACCGGGTGCACTTCCTGCCGGGACCAGTG < 41bp 0.756298179871062 0.370768839133071 0.12007943 0.06698111 prediction 0.512596359742124 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599737 chr1:107599740 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_63304 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:107599716-107599752
64251 chr12 6344713 6344713 1 + C T UCEC 6344711 + 6344691 6344731 41 TCTGCCCCAAGAAGGACGTACTCGAAACCTTCACCGTGAAG TCTGCCCCAAGAAGGACGTACTTGAAACCTTCACCGTGAAG < 41bp 0.756284122559254 0.482097564626859 0.5747899 0.08237168 prediction 0.512568245118508 Functional Loss - CD9 ENSG00000010278 CDS Human protein_coding chr12:6344711 chr12:6344713 synonymous SNV 0.000 0 23 hm5C_associated_SNPs_63309 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:6344699-6344726
64251 chr19 52090454 52090454 1 + G T SARC 52090452 + 52090432 52090472 41 AATGTGGGGGGAGCTTCACCCAGAAGTCACACCTCTTTGCC AATGTGGGGGGAGCTTCACCCATAAGTCACACCTCTTTGCC < 41bp 0.875649389896453 0.619365298983087 0.819397 0.07599777 prediction 0.512568181826732 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090452 chr19:52090454 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_63310 0 0 2 SAFB2 POSTAR2 ENCODE chr19:52090422-52090481
64251 chr13 115002321 115002321 1 + G T UCEC 115002319 + 115002299 115002339 41 GGCTCAGTGTCTTTACCTGACAGCACAATATCACAGAGCCG GGCTCAGTGTCTTTACCTGACATCACAATATCACAGAGCCG < 41bp 0.756274789784393 0.427658716302908 0.21333292 0.08127314 prediction 0.512549579568787 Functional Loss - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115002319 chr13:115002321 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_63314 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:115002290-115002329
64251 chr9 138395504 138395504 1 + A T HNSC 138395500 + 138395480 138395520 41 TCACCGCCCACATGGCCTACCGCAAGGGCATCATCTTGTTT TCACCGCCCACATGGCCTACCGCATGGGCATCATCTTGTTT < 41bp 0.756271500064775 0.434539268364594 0.033043563 0.012886256 prediction 0.51254300012955 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395500 chr9:138395504 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_63316 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:138395440-138395520
64251 chr4 38907405 38907405 1 + G T LUAD 38907403 + 38907383 38907423 41 TGCAGCCACAGATCAGGGCCCTGCAGAAAGCCCACCCACTT TGCAGCCACAGATCAGGGCCCTTCAGAAAGCCCACCCACTT < 41bp 0.756262383323535 0.412781086053687 0.32242405 0.27370983 prediction 0.512524766647069 Functional Loss - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38907403 chr4:38907405 nonsynonymous SNV 0.413 0 23 hm5C_associated_SNPs_63317 0 0 4 DDX24 POSTAR2 ENCODE chr4:38907375-38907476
64251 chr16 1797221 1797221 1 + C T UCEC 1797219 + 1797199 1797239 41 GCAAGCGTGCCCGGGAGAAGCGCGACAGCCGCAACATGGAA GCAAGCGTGCCCGGGAGAAGCGTGACAGCCGCAACATGGAA < 41bp 0.76845199982062 0.512193822394609 0.3849492 0.2947887 prediction 0.512516354852022 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1797219 chr16:1797221 synonymous SNV . 0 23 hm5C_associated_SNPs_63319 0 0 7 BUD13 POSTAR2 ENCODE chr16:1797218-1797262
64251 chr9 71789273 71789273 1 + G T rs199557806 71789270 + 71789250 71789290 41 GGTCCGGAGCTGCGCGCCTACGCGGGACCTGTGTCCGAAAT GGTCCGGAGCTGCGCGCCTACGCTGGACCTGTGTCCGAAAT < 41bp 0.76874999164307 0.512497973320881 0.40132564 0.1419462 prediction 0.512504036644376 Functional Loss - TJP2 ENSG00000119139 UTR5 Human protein_coding chr9:71789270 chr9:71789273 . . 0 24 hm5C_associated_SNPs_63323 1 0 12 BUD13 POSTAR2 ENCODE chr9:71789220-71789284
64251 chr1 222838751 222838751 1 + A T PRAD 222838747 + 222838727 222838767 41 CCACCCTCGGGGATTTTTACCTGGACACGCACCATTTAGAC CCACCCTCGGGGATTTTTACCTGGTCACGCACCATTTAGAC < 41bp 0.848162650665695 0.591916583463691 0.56363297 0.5664531 prediction 0.512492134404008 Functional Loss - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222838747 chr1:222838751 synonymous SNV . 0 25 hm5C_associated_SNPs_63325 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:222838712-222838784
64251 chr3 9743545 9743545 1 + G T SKCM 9743543 + 9743523 9743563 41 GCCTTCTTGGCTGCGTACAGCAGCACAGTGGGGCTTCGGGC GCCTTCTTGGCTGCGTACAGCATCACAGTGGGGCTTCGGGC < 41bp 0.87100769492602 0.614764645114468 0.79069835 0.2885652 prediction 0.512486099623104 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9743543 chr3:9743545 nonsynonymous SNV 0.914 3 23 hm5C_associated_SNPs_63326 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:9743498-9743565
64251 chr17 27371895 27371895 1 + C T COAD 27371893 + 27371873 27371913 41 CCAGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGAC CCAGTTCTTTCTACCACACTCCTGAGGAAGCTCCCATGGAC < 41bp 0.756240697544956 0.47631446992748 0.16442713 0.22886902 prediction 0.512481395089913 Functional Loss - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27371893 chr17:27371895 stopgain 1.000 1 23 hm5C_associated_SNPs_63328 0 0 4 GRWD1 POSTAR2 ENCODE chr17:27371876-27371939
64251 chr12 7047786 7047786 1 + G C UCEC 7047782 + 7047762 7047802 41 ACACTCCAGCCTTGCGCACTCTCAGTGAATATGCCCGGCCT ACACTCCAGCCTTGCGCACTCTCACTGAATATGCCCGGCCT < 41bp 0.756238969869858 0.472406055852666 0.27696925 0.10556027 prediction 0.512477939739716 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7047782 chr12:7047786 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_63330 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:7047692-7047790
64251 chr10 116719551 116719551 1 + G T UCEC 116719549 + 116719529 116719569 41 AGATTCTACGGGGAGGGTAACAGAAGAAAAACCTTACGGTA AGATTCTACGGGGAGGGTAACATAAGAAAAACCTTACGGTA < 41bp 0.874904132293648 0.618666687934364 0.77934235 0.13440332 prediction 0.512474888718567 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116719549 chr10:116719551 stopgain 0.997 1 23 hm5C_associated_SNPs_63333 0 0 2 PRPF8 POSTAR2 ENCODE chr10:116719520-116719576
64251 chr11 65088799 65088799 1 + G T GBM 65088796 + 65088776 65088816 41 AGACCCCTCAGCCTTCCCCACAGGAGGGAGGGAGTGTGGAC AGACCCCTCAGCCTTCCCCACAGTAGGGAGGGAGTGTGGAC < 41bp 0.912947117345528 0.656711953090979 0.8639761 0.3467689 prediction 0.512470328509098 Functional Loss - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088796 chr11:65088799 stopgain 0.658 0 24 hm5C_associated_SNPs_63336 0 0 1 DDX6 POSTAR2 ENCODE chr11:65088788-65088819
64251 chr12 122620095 122620095 1 + G T LUSC 122620092 + 122620072 122620112 41 GTGACAGATCTCGGCCATGGCACGAGCAGCCCGCCTGCCCC GTGACAGATCTCGGCCATGGCACTAGCAGCCCGCCTGCCCC < 41bp 0.918100278384305 0.661890985915624 0.5935119 0.2616703 prediction 0.512418584937361 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122620092 chr12:122620095 synonymous SNV . 0 24 hm5C_associated_SNPs_63343 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:122620059-122620098
64251 chr9 131285001 131285001 1 + G C LUAD 131284997 + 131284977 131285017 41 GAGAGGAAGGTGCAAGCCCTCTCGGAGATGGCATCTGAACA GAGAGGAAGGTGCAAGCCCTCTCGCAGATGGCATCTGAACA < 41bp 0.811903245804436 0.55569698463644 0.32934445 0.35701853 prediction 0.512412522335992 Functional Loss - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131284997 chr9:131285001 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_63346 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131284989-131285021
64251 chr3 131101103 131101103 1 + G C BLCA 131101102 + 131101082 131101122 41 TATGCCAAGCGTCTGACGCTCGAGGAGCTGTTGGCTGTGGA TATGCCAAGCGTCTGACGCTCCAGGAGCTGTTGGCTGTGGA < 41bp 0.756198662449858 0.444481873105138 0.9001186 0.4369545 prediction 0.512397324899717 Functional Loss - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131101102 chr3:131101103 nonsynonymous SNV 0.768 0 22 hm5C_associated_SNPs_63348 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr3:131101103-131101104
64251 chr6 37414177 37414177 1 + C T SKCM 37414175 + 37414155 37414195 41 GAAGAGGCTTGGGTCTGACACTCCGGGGCTTTGACCAGGAG GAAGAGGCTTGGGTCTGACACTTCGGGGCTTTGACCAGGAG < 41bp 0.756195729336111 0.471573313309823 0.22629592 0.14332148 prediction 0.512391458672223 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37414175 chr6:37414177 synonymous SNV . 0 23 hm5C_associated_SNPs_63349 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:37414171-37414192
64251 chr2 29152512 29152512 1 + A T UCEC 29152508 + 29152488 29152528 41 ACAAAAAAGGAAAGGAAGACCTCCAGACGAATAGCTTTCCA ACAAAAAAGGAAAGGAAGACCTCCTGACGAATAGCTTTCCA < 41bp 0.888785164372312 0.632596305979999 0.95246613 0.09909582 prediction 0.512377716784626 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29152508 chr2:29152512 nonsynonymous SNV 0.892 2 25 hm5C_associated_SNPs_63350 0 0 5 GRWD1 POSTAR2 ENCODE chr2:29152459-29152518
64251 chr7 92078113 92078113 1 + A T CHOL 92078109 + 92078089 92078129 41 GTCTGCTCGGCTCAGAAACACTAAATACAAATCTGCTCCGG GTCTGCTCGGCTCAGAAACACTAATTACAAATCTGCTCCGG < 41bp 0.756182001784514 0.41487647275903 0.28218493 0.10962698 prediction 0.512364003569027 Functional Loss - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92078109 chr7:92078113 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_63351 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:92078100-92078120
64251 chr7 128498867 128498867 1 + G T rs571289905 128498865 + 128498845 128498885 41 ACACAAGGGGCTGGCGAGGGCTGCGAGGCCAGGGAAGCCCT ACACAAGGGGCTGGCGAGGGCTTCGAGGCCAGGGAAGCCCT < 41bp 0.756165813843798 0.440026357358794 0.24851105 0.33331937 prediction 0.512331627687596 Functional Loss - FLNC ENSG00000242902 ncRNA_intronic Human antisense chr7:128498865 chr7:128498867 . . 0 23 hm5C_associated_SNPs_63355 0 0 5 AGGF1 POSTAR2 ENCODE chr7:128498848-128498904
64251 chr20 61468540 61468540 1 + C T SKCM 61468538 + 61468518 61468558 41 GGGCCCCCAGGACCCCCAGGCTCCATTGGTCACCCTGGCGC GGGCCCCCAGGACCCCCAGGCTTCATTGGTCACCCTGGCGC < 41bp 0.78856412499885 0.532413758504273 0.9355463 0.15589061 prediction 0.512300732989154 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468538 chr20:61468540 nonsynonymous SNV 0.768 4 23 hm5C_associated_SNPs_63360 0 0 1 SND1 POSTAR2 ENCODE chr20:61468471-61468544
64251 chr8 110357192 110357192 1 + G T rs1979300 110357190 + 110357170 110357210 41 AATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCT AATGTAGAATGAAACTCATTCATCATTAACACATAGGCCCT < 41bp 0.75614791002169 0.45197807754702 0.396817 0.15397823 prediction 0.51229582004338 Functional Loss - ENY2 ENSG00000120533 UTR3 Human protein_coding chr8:110357190 chr8:110357192 . . 0 23 hm5C_associated_SNPs_63362 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:110357161-110357193
64251 chr2 169713227 169713227 1 + C T UCEC 169713225 + 169713205 169713245 41 GAACGAATGCTTAAAACGTACTCCAGCACCTCCTCCTTCTC GAACGAATGCTTAAAACGTACTTCAGCACCTCCTCCTTCTC < 41bp 0.756146605268225 0.460037058122598 0.8599913 0.037787706 prediction 0.512293210536451 Functional Loss - NOSTRIN ENSG00000163072 CDS Human protein_coding chr2:169713225 chr2:169713227 nonsynonymous SNV 0.112 1 23 hm5C_associated_SNPs_63363 0 0 1 SF3B1 POSTAR2 ENCODE chr2:169713223-169713253
64251 chr6 133137162 133137162 1 + G T rs74193814 133137159 + 133137139 133137179 41 TTTTGTACTTTCAGTAGAAACGGGGTTTCGCCATGTTGGTC TTTTGTACTTTCAGTAGAAACGGTGTTTCGCCATGTTGGTC < 41bp 0.893577064848408 0.637434562106165 0.92194414 0.66162896 prediction 0.512285005484486 Functional Loss - RPS12 ENSG00000112306 intronic Human protein_coding chr6:133137159 chr6:133137162 . . 0 24 hm5C_associated_SNPs_63364 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:133137134-133137255
64251 chr1 37947258 37947258 1 + C T UCEC 37947256 + 37947236 37947276 41 GATCCTGGTGTTCACACCATCACGACGCGTGGGTGGCAAGC GATCCTGGTGTTCACACCATCATGACGCGTGGGTGGCAAGC < 41bp 0.809735675440539 0.553595408087089 0.20206404 0.30421686 prediction 0.5122805347069 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37947256 chr1:37947258 stopgain 0.034 1 23 hm5C_associated_SNPs_63366 0 0 1 BUD13 POSTAR2 ENCODE chr1:37947202-37947290
64251 chr20 36718149 36718149 1 + C T UCEC 36718147 + 36718127 36718167 41 GGAATACAAACAGAAGCTTGCACGAGTAACCCAGGTCCGCA GGAATACAAACAGAAGCTTGCATGAGTAACCCAGGTCCGCA < 41bp 0.779458744597042 0.523332884151957 0.2452986 0.35384816 prediction 0.512251720890171 Functional Loss - RPRD1B ENSG00000101413 CDS Human protein_coding chr20:36718147 chr20:36718149 stopgain 0.955 1 23 hm5C_associated_SNPs_63373 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:36718099-36718154
64251 chr8 17419540 17419540 1 + C T UCEC 17419538 + 17419518 17419558 41 GCCTGGAGCCTCGCTCTCCTCGCGCTGTTTCTTGTTCTCTT GCCTGGAGCCTCGCTCTCCTCGTGCTGTTTCTTGTTCTCTT < 41bp 0.783052346039864 0.526931751995117 0.14624086 0.23922378 prediction 0.512241188089494 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17419538 chr8:17419540 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_63374 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:17419534-17419557
64251 chr1 11346010 11346010 1 + C T SKCM 11346008 + 11345988 11346028 41 AGCATCCTGGCCACACACTGCACCATCAGCCTGGCACTCCC AGCATCCTGGCCACACACTGCATCATCAGCCTGGCACTCCC < 41bp 0.756112533450884 0.480951717699023 0.055392325 0.01570481 prediction 0.512225066901767 Functional Loss - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11346008 chr1:11346010 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_63375 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:11346003-11346018
64251 chr6 26598534 26598534 1 + C T BLCA 26598532 + 26598512 26598552 41 GGTCCCACCTCAGCGAGCACCTCGCCTTTGAGCGCCAGGTG GGTCCCACCTCAGCGAGCACCTTGCCTTTGAGCGCCAGGTG < 41bp 0.762593448687311 0.506481817832178 0.087521106 0.06455675 prediction 0.512223261710266 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598532 chr6:26598534 synonymous SNV . 0 23 hm5C_associated_SNPs_63376 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26598522-26598560
64251 chr17 37357472 37357472 1 + C T BLCA 37357470 + 37357450 37357490 41 TTTTCTGTGTGTCTAGTATGCTCAGGCTTCAGAAGAGGCTC TTTTCTGTGTGTCTAGTATGCTTAGGCTTCAGAAGAGGCTC < 41bp 0.772669468659671 0.516561025418832 0.106850386 0.1768497 prediction 0.512216886481677 Functional Loss - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357470 chr17:37357472 synonymous SNV . 0 23 hm5C_associated_SNPs_63378 0 0 25 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:37357460-37357480
64251 chr8 110573096 110573096 1 + G T GBM 110573094 + 110573074 110573114 41 TAGGTGACTTAGATACCTGGCAGGAAAATACCAATGCATGG TAGGTGACTTAGATACCTGGCATGAAAATACCAATGCATGG < 41bp 0.756095022312671 0.423034971040064 0.48562175 0.16615957 prediction 0.512190044625341 Functional Loss - EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110573094 chr8:110573096 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_63379 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:110573060-110573098
64251 chr8 110573097 110573097 1 + G T OV 110573094 + 110573074 110573114 41 TAGGTGACTTAGATACCTGGCAGGAAAATACCAATGCATGG TAGGTGACTTAGATACCTGGCAGTAAAATACCAATGCATGG < 41bp 0.756095022312671 0.380139511095141 0.48562175 0.17596796 prediction 0.512190044625341 Functional Loss - EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110573094 chr8:110573097 stopgain 0.999 1 24 hm5C_associated_SNPs_63380 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:110573060-110573098
64251 chr6 27101073 27101073 1 + A T STAD 27101069 + 27101049 27101089 41 GCGGGCAACGCGGCCCGCGACAACAAGAAGACCCGCATCAT GCGGGCAACGCGGCCCGCGACAACTAGAAGACCCGCATCAT < 41bp 0.857592599285361 0.601504405138039 0.16883975 0.090433 prediction 0.512176388294644 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101069 chr6:27101073 stopgain 1.000 1 25 hm5C_associated_SNPs_63382 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:27101004-27101116
64251 chr22 50962089 50962089 1 + G T CESC 50962087 + 50962067 50962107 41 CATGTGCCGCCGCACACTGTCTGAGATCTGCTCAGCCGATC CATGTGCCGCCGCACACTGTCTTAGATCTGCTCAGCCGATC < 41bp 0.756080606096795 0.416307636120624 0.30527312 0.06467521 prediction 0.512161212193589 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962087 chr22:50962089 stopgain 0.001 0 23 hm5C_associated_SNPs_63385 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:50962063-50962101
64251 chr21 34619141 34619141 1 + A C PAAD 34619140 + 34619120 34619160 41 GTCACCGTCCTAGAAGGATTCAGCGGGAACACAACGTTGTT GTCACCGTCCTAGAAGGATTCCGCGGGAACACAACGTTGTT < 41bp 0.766353466560976 0.510278810140672 0.87983143 0.578395 prediction 0.512149312840609 Functional Loss - IFNAR2 ENSG00000159110;ENSG00000249624 CDS Human other chr21:34619140 chr21:34619141 nonsynonymous SNV 0.443 0 22 hm5C_associated_SNPs_63386 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr21:34619108-34619144
64251 chr17 2266381 2266381 1 + G T rs112097002 2266378 + 2266358 2266398 41 TGGTCCAGCGGCACCGCATCCGGGGTCCACCTACTCGCCAG TGGTCCAGCGGCACCGCATCCGGTGTCCACCTACTCGCCAG < 41bp 0.915760197048998 0.659691481757751 0.90779877 0.57851547 prediction 0.512137430582494 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2266378 chr17:2266381 nonsynonymous SNV 0.914 4 24 hm5C_associated_SNPs_63387 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:2266373-2266401
64251 chr19 6828446 6828446 1 + C T COAD 6828444 + 6828424 6828464 41 TCTCAGGAGCTGGTGAAACACACGCAGGAGGCGATGGAGAA TCTCAGGAGCTGGTGAAACACATGCAGGAGGCGATGGAGAA < 41bp 0.756067136255115 0.485741403114661 0.07020712 0.26386434 prediction 0.51213427251023 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6828444 chr19:6828446 nonsynonymous SNV 0.932 4 23 hm5C_associated_SNPs_63388 0 0 1 DDX24 POSTAR2 ENCODE chr19:6828437-6828492
64251 chr11 34119305 34119305 1 + C T ESCA 34119303 + 34119283 34119323 41 GAGTGGACCACGGGGAGCCCCACGAGGTAATATTTTGTGGT GAGTGGACCACGGGGAGCCCCATGAGGTAATATTTTGTGGT < 41bp 0.806790493998456 0.550727020895145 0.5399655 0.50701255 prediction 0.512126946206622 Functional Loss - CAPRIN1 ENSG00000135387 CDS Human protein_coding chr11:34119303 chr11:34119305 stopgain 1.000 0 23 hm5C_associated_SNPs_63389 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:34119254-34119309
64251 chr17 40845455 40845455 1 + C T HNSC 40845453 + 40845433 40845473 41 CACAGGCCACTGTGCCCACCCTCGGCTCCCCTGTTTCCATG CACAGGCCACTGTGCCCACCCTTGGCTCCCCTGTTTCCATG < 41bp 0.803976390062155 0.547914198492957 0.026355654 0.011873275 prediction 0.512124383138397 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40845453 chr17:40845455 nonsynonymous SNV 0.921 2 23 hm5C_associated_SNPs_63390 0 0 1 SND1 POSTAR2 ENCODE chr17:40845447-40845498
64251 chr19 39912892 39912892 1 + G T LUSC 39912890 + 39912870 39912910 41 CCTCAATCACTGAAGAAATCCTGGAACTGCTGAATCAGCGA CCTCAATCACTGAAGAAATCCTTGAACTGCTGAATCAGCGA < 41bp 0.756049166825666 0.420729778150277 0.40859163 0.17298222 prediction 0.512098333651333 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39912890 chr19:39912892 synonymous SNV . 0 23 hm5C_associated_SNPs_63394 0 0 2 SRSF1 POSTAR2 ENCODE chr19:39912815-39912894
64251 chr2 176983913 176983913 1 + G C HNSC 176983912 + 176983892 176983932 41 TGAAACTCAAGAAGATGAGCCGAGAGAACCGGATCCGAGAA TGAAACTCAAGAAGATGAGCCCAGAGAACCGGATCCGAGAA < 41bp 0.836880955870115 0.580838983011856 0.73415947 0.31665516 prediction 0.512083945716519 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983912 chr2:176983913 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_63397 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:176983858-176983953
64251 chr2 238990768 238990768 1 + C T UCEC 238990766 + 238990746 238990786 41 CTACCTCCCATCCTCGTGCACACGGATGCTGCACAGGCCTT CTACCTCCCATCCTCGTGCACATGGATGCTGCACAGGCCTT < 41bp 0.763272714252731 0.507254668081158 0.17732003 0.31424302 prediction 0.512036092343146 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990766 chr2:238990768 nonsynonymous SNV 0.461 5 23 hm5C_associated_SNPs_63404 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:238990737-238990769
64251 chrX 139866217 139866217 1 + G T LUAD 139866214 + 139866194 139866234 41 TCCAAAAAATCCGGGTCTTCCAGGAAATCCGTGTCTTCCAG TCCAAAAAATCCGGGTCTTCCAGTAAATCCGTGTCTTCCAG < 41bp 0.89808046140402 0.642066231307041 0.8540397 0.31040308 prediction 0.512028460193958 Functional Loss - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139866214 chrX:139866217 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_63405 0 0 4 FUS POSTAR2 GSE40653,GSM998875 chrX:139866180-139866260
64251 chr1 156169978 156169978 1 + G T LUAD 156169975 + 156169955 156169995 41 AGAGTAACACAGTCAAATCACTGGTGGCTGGTGGCTCAGCC AGAGTAACACAGTCAAATCACTGTTGGCTGGTGGCTCAGCC < 41bp 0.756012318563607 0.363359487965993 0.4489007 0.19357255 prediction 0.512024637127214 Functional Loss - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156169975 chr1:156169978 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_63407 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156169960-156169980
64251 chr11 34162015 34162015 1 + C T COAD 34162013 + 34161993 34162033 41 GAAGCGGCTGGAGATGTATTCACGGAATATGGTGGACTATC GAAGCGGCTGGAGATGTATTCATGGAATATGGTGGACTATC < 41bp 0.791646937146942 0.535657389366272 0.8192729 0.83801407 prediction 0.511979095561338 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34162013 chr11:34162015 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_63416 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34161987-34162029
64251 chr1 52879660 52879660 1 + G T UCEC 52879657 + 52879637 52879677 41 GAGGAGTAGGAGCCGGTCTCCCAGAAGGTAAAGCCTAGTCA GAGGAGTAGGAGCCGGTCTCCCATAAGGTAAAGCCTAGTCA < 41bp 0.755988335858641 0.373180199169737 0.38656723 0.13803956 prediction 0.511976671717282 Functional Loss - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52879657 chr1:52879660 nonsynonymous SNV 0.883 1 24 hm5C_associated_SNPs_63417 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:52879634-52879660
64251 chr17 73518289 73518289 1 + C T COAD 73518287 + 73518267 73518307 41 GATCCCGAGGTGCAGCGGTGCTCCAGCTGGCGGGAGTACAA GATCCCGAGGTGCAGCGGTGCTTCAGCTGGCGGGAGTACAA < 41bp 0.804193103158494 0.548218861678049 0.5586066 0.24629933 prediction 0.51194848296089 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73518287 chr17:73518289 nonsynonymous SNV 0.981 1 23 hm5C_associated_SNPs_63423 0 0 1 PPIG POSTAR2 ENCODE chr17:73518261-73518320
64251 chr5 153830749 153830749 1 + C T UCEC 153830747 + 153830727 153830767 41 GTGACGATGGCGGAGATTCTCCCGAGCACGACACTGACATT GTGACGATGGCGGAGATTCTCCTGAGCACGACACTGACATT < 41bp 0.755974027999505 0.486336613697448 0.4352021 0.2960071 prediction 0.511948055999009 Functional Loss - SAP30L ENSG00000164576 CDS Human protein_coding chr5:153830747 chr5:153830749 synonymous SNV . 0 23 hm5C_associated_SNPs_63424 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:153830724-153830756
64251 chr17 36288293 36288293 1 + A C ESCA 36288289 + 36288269 36288309 41 GAAATGAAGTTGAAAAACCCCGGAAGATACCAGGTACGCTC GAAATGAAGTTGAAAAACCCCGGACGATACCAGGTACGCTC < 41bp 0.755967121452434 0.372803817888141 0.36338872 0.26360533 prediction 0.511934242904868 Functional Loss - TBC1D3;TBC1D3C;TBC1D3D;TBC1D3E;TBC1D3F;TBC1D3G;TBC1D3H;TBC1D3I;TBC1D3K;TBC1D3L ENSG00000185128 CDS Human other chr17:36288289 chr17:36288293 synonymous SNV . 0 25 hm5C_associated_SNPs_63426 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:36288262-36288293
64251 chr9 119460463 119460463 1 + G T LUAD 119460460 + 119460440 119460480 41 AAGCAGCTGAGGAGCGGCGTCGGGACTTTGGAGAGAAGTTA AAGCAGCTGAGGAGCGGCGTCGGTACTTTGGAGAGAAGTTA < 41bp 0.909477980318104 0.653526370181288 0.28552118 0.10399452 prediction 0.511903220273632 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460460 chr9:119460463 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_63432 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:119460440-119460471
64251 chr4 75167443 75167443 1 + C T SKCM 75167441 + 75167421 75167461 41 AAAGAAAGCTGGCTTTATCACTCCAGTTCCAGGAGGTGTGG AAAGAAAGCTGGCTTTATCACTTCAGTTCCAGGAGGTGTGG < 41bp 0.755938848957459 0.485839483155281 0.90017337 0.13091546 prediction 0.511877697914918 Functional Loss - MTHFD2L ENSG00000163738 CDS Human protein_coding chr4:75167441 chr4:75167443 nonsynonymous SNV 0.956 5 23 hm5C_associated_SNPs_63437 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:75167432-75167461
64251 chr19 50547988 50547988 1 + G T LUAD 50547986 + 50547966 50548006 41 TCTTCGAAGAAGGATTCTCCCAGGAGATTATAGAGATGTTA TCTTCGAAGAAGGATTCTCCCATGAGATTATAGAGATGTTA < 41bp 0.865197533089442 0.609259341549259 0.86499965 0.20497042 prediction 0.511876383080365 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50547986 chr19:50547988 nonsynonymous SNV 0.391 2 23 hm5C_associated_SNPs_63438 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50547953-50547991
64251 chr12 110566905 110566905 1 + G T HNSC 110566903 + 110566883 110566923 41 AGGTACCAAGTGAGTTTCTTCAGGATGAAACTGTGGCTGAC AGGTACCAAGTGAGTTTCTTCATGATGAAACTGTGGCTGAC < 41bp 0.848890986534755 0.592956401131239 0.8804722 0.07691249 prediction 0.511869170807031 Functional Loss - IFT81 ENSG00000122970 CDS Human protein_coding chr12:110566903 chr12:110566905 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_63440 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:110566879-110566912
64251 chr8 81426166 81426166 1 + C T LUSC 81426164 + 81426144 81426184 41 GATTTAGATGGTGCTCTACTCTCGGGGCCAGATGGTGATAG GATTTAGATGGTGCTCTACTCTTGGGGCCAGATGGTGATAG < 41bp 0.789012934204639 0.53308244625028 0.33825272 0.17849135 prediction 0.511860975908718 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81426164 chr8:81426166 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_63443 0 0 1 U2AF2 POSTAR2 ENCODE chr8:81426139-81426202
64251 chr17 73809956 73809956 1 + C T UCEC 73809954 + 73809934 73809974 41 GCACCGAGCAGCAGTTCCACCCCGAGGTGGGCCCCACAGCA GCACCGAGCAGCAGTTCCACCCTGAGGTGGGCCCCACAGCA < 41bp 0.755929723081894 0.48804331554431 0.34624302 0.27176046 prediction 0.511859446163788 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73809954 chr17:73809956 synonymous SNV . 0 23 hm5C_associated_SNPs_63444 0 0 1 PRPF8 POSTAR2 ENCODE chr17:73809952-73810044
64251 chr20 10032408 10032408 1 + G T UCEC 10032406 + 10032386 10032426 41 TGTTGAGCTTCTTGTTGAATCTGGAGCTTTAATAGATGCAG TGTTGAGCTTCTTGTTGAATCTTGAGCTTTAATAGATGCAG < 41bp 0.867122510222511 0.611197376618977 0.16282976 0.07350668 prediction 0.511850267207069 Functional Loss - ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10032406 chr20:10032408 stopgain 0.930 1 23 hm5C_associated_SNPs_63446 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:10032397-10032435
64251 chr2 178257556 178257556 1 + G T MESO 178257553 + 178257533 178257573 41 GCTGCAGCGGGTGGGACTGGCTTGGGCGCGGGCGCGAGCTA GCTGCAGCGGGTGGGACTGGCTTTGGCGCGGGCGCGAGCTA < 41bp 0.899925407774552 0.64400655916769 0.8571912 0.4747525 prediction 0.511837697213725 Functional Loss - AGPS ENSG00000018510 CDS Human protein_coding chr2:178257553 chr2:178257556 nonsynonymous SNV 0.014 1 24 hm5C_associated_SNPs_63449 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:178257540-178257560
64251 chr11 117066565 117066565 1 + C T rs139635942 117066563 + 117066543 117066583 41 ACAACCGGGACTGCATCCTCCTCGACTTCTTTGACGACCAC ACAACCGGGACTGCATCCTCCTTGACTTCTTTGACGACCAC < 41bp 0.820868090510835 0.564965085854751 0.44461557 0.09646329 prediction 0.511806009312167 Functional Loss - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117066563 chr11:117066565 synonymous SNV . 0 23 hm5C_associated_SNPs_63452 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:117066553-117066587
64251 chr10 7763668 7763668 1 + G T LUSC 7763666 + 7763646 7763686 41 AGAGAATATGCCCTAACTGCCGGGAGACTGCGGTAGATGGG AGAGAATATGCCCTAACTGCCGTGAGACTGCGGTAGATGGG < 41bp 0.88678987686414 0.630893643769002 0.89606833 0.29252034 prediction 0.511792466190275 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7763666 chr10:7763668 synonymous SNV . 0 23 hm5C_associated_SNPs_63457 0 0 6 LIN28B POSTAR2 ENCODE chr10:7763660-7763689
64251 chr11 112097144 112097144 1 + G C rs377086462 112097140 + 112097120 112097160 41 GCGGCGGGAGGAGGTGCCGGCCGAGCACCGCAGACAGCGCC GCGGCGGGAGGAGGTGCCGGCCGACCACCGCAGACAGCGCC < 41bp 0.796095252859843 0.540209573085732 0.25838727 0.355411 prediction 0.511771359548221 Functional Loss - PTS ENSG00000150787 UTR5 Human protein_coding chr11:112097140 chr11:112097144 . . 0 25 hm5C_associated_SNPs_63459 0 0 2 DDX3X POSTAR2 ENCODE chr11:112097111-112097178
64251 chr3 99979901 99979901 1 + G C BRCA 99979900 + 99979880 99979920 41 TGTGCCGCCGCTGCCAACGTCGAGCGGCGACGGCTGGTGAG TGTGCCGCCGCTGCCAACGTCCAGCGGCGACGGCTGGTGAG < 41bp 0.824088559456001 0.568228454892585 0.8499131 0.43007225 prediction 0.511720209126833 Functional Loss - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:99979900 chr3:99979901 synonymous SNV . 0 22 hm5C_associated_SNPs_63464 0 0 7 GRWD1 POSTAR2 ENCODE chr3:99979853-99979914
64251 chrX 115584233 115584233 1 + G T UCEC 115584230 + 115584210 115584250 41 AGAGGCTCTAGCCCAACTCCCAGGTGGTCCATTTTGGTCCA AGAGGCTCTAGCCCAACTCCCAGTTGGTCCATTTTGGTCCA < 41bp 0.755858236581653 0.363846269379721 0.8889822 0.08866462 prediction 0.511716473163305 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115584230 chrX:115584233 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_63466 0 0 2 SND1 POSTAR2 ENCODE chrX:115584198-115584251
64251 chr12 54448943 54448943 1 + C T HNSC 54448941 + 54448921 54448961 41 TCTGAAGACCACTCCCAGAGCGCCACGCCGCCGGAGCAGCA TCTGAAGACCACTCCCAGAGCGTCACGCCGCCGGAGCAGCA < 41bp 0.755851588706679 0.486437056823347 0.02916044 0.04086262 prediction 0.511703177413358 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448941 chr12:54448943 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_63467 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:54448908-54448945
64251 chr10 99504646 99504646 1 + C T SKCM 99504644 + 99504624 99504664 41 AGAGAGGTCGCCTGTCTCGTCCCGAGGCCGTGGCTGAGGTG AGAGAGGTCGCCTGTCTCGTCCTGAGGCCGTGGCTGAGGTG < 41bp 0.770574433838504 0.514725317399426 0.28479016 0.13433227 prediction 0.511698232878156 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99504644 chr10:99504646 synonymous SNV . 0 23 hm5C_associated_SNPs_63469 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:99504645-99504646
64251 chr11 124500738 124500738 1 + C T CESC 124500736 + 124500716 124500756 41 GATCCAGAGCTGTCCAGGAGCTCGAAAATGCATCAAGTAAG GATCCAGAGCTGTCCAGGAGCTTGAAAATGCATCAAGTAAG < 41bp 0.822226405212397 0.566392549717155 0.021382302 0.021330804 prediction 0.511667710990483 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124500736 chr11:124500738 stopgain 0.991 1 23 hm5C_associated_SNPs_63475 0 0 5 BUD13 POSTAR2 ENCODE chr11:124500680-124500749
64251 chr10 3189371 3189371 1 - C A UCEC 3189374 - 3189354 3189394 41 CTGAGGAAGCTCCCGCGTATCAAGAAACACTTGTTAAATGG CTGAGGAAGCTCCCGCGTATCAATAAACACTTGTTAAATGG < 41bp 0.755793200669506 0.373841385596555 0.5431864 0.13317624 prediction 0.511586401339013 Functional Loss - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189374 chr10:3189371 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_63480 0 0 4 BUD13 POSTAR2 ENCODE chr10:3189369-3189457
64251 chr3 51708516 51708516 1 + G C HNSC 51708512 + 51708492 51708532 41 GGTGAGACTGGGCGGCTTTTCACTGAGAGCTGCAGCATCTC GGTGAGACTGGGCGGCTTTTCACTCAGAGCTGCAGCATCTC < 41bp 0.755784015467023 0.475791042553554 0.21327588 0.1030069 prediction 0.511568030934046 Functional Loss - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51708512 chr3:51708516 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_63482 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr3:51708500-51708520
64251 chr6 12124262 12124262 1 + C T SKCM 12124260 + 12124240 12124280 41 GCAGCCTCCATCTTCACCTTCTCGAGTGGGAGTGACTGGGC GCAGCCTCCATCTTCACCTTCTTGAGTGGGAGTGACTGGGC < 41bp 0.781232964991452 0.525456809687663 0.18593925 0.0717192 prediction 0.511552310607579 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12124260 chr6:12124262 stopgain 0.012 0 23 hm5C_associated_SNPs_63484 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:12124243-12124275
64251 chr8 145064280 145064280 1 + G C rs529442056 145064276 + 145064256 145064296 41 CGCAGGCCCAGCTGAGCGGCCGCCGAGCGGGTGCGGGTGCG CGCAGGCCCAGCTGAGCGGCCGCCCAGCGGGTGCGGGTGCG < 41bp 0.768425492507064 0.51265166638322 0.866281 0.26903346 prediction 0.511547652247688 Functional Loss - GRINA ENSG00000178719 UTR5 Human protein_coding chr8:145064276 chr8:145064280 . . 0 25 hm5C_associated_SNPs_63487 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:145064260-145064280
64251 chr10 101514376 101514376 1 + C T COAD 101514374 + 101514354 101514394 41 TCTGCTCGGTCTACTAGAGACTCGGGAATGAAGTTTCGGTA TCTGCTCGGTCTACTAGAGACTTGGGAATGAAGTTTCGGTA < 41bp 0.811774209989725 0.556017566603284 0.10018778 0.1692957 prediction 0.511513286772882 Functional Loss - CUTC ENSG00000119929 CDS Human protein_coding chr10:101514374 chr10:101514376 nonsynonymous SNV 0.766 4 23 hm5C_associated_SNPs_63490 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr10:101514344-101514379
64251 chr11 73101965 73101965 1 + G T HNSC 73101963 + 73101943 73101983 41 ACTCTGTGGAGACTGCTGGCCTGGGTAAGCCAAAGGGAGTG ACTCTGTGGAGACTGCTGGCCTTGGTAAGCCAAAGGGAGTG < 41bp 0.755751980173917 0.406932128203682 0.34795344 0.1062915 prediction 0.511503960347834 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73101963 chr11:73101965 nonsynonymous SNV 0.888 5 23 hm5C_associated_SNPs_63491 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:73101939-73101968
64251 chr11 73101966 73101966 1 + G T STAD 73101963 + 73101943 73101983 41 ACTCTGTGGAGACTGCTGGCCTGGGTAAGCCAAAGGGAGTG ACTCTGTGGAGACTGCTGGCCTGTGTAAGCCAAAGGGAGTG < 41bp 0.755751980173917 0.361843494112112 0.34795344 0.14746767 prediction 0.511503960347834 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73101963 chr11:73101966 nonsynonymous SNV 0.883 5 24 hm5C_associated_SNPs_63492 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:73101939-73101968
64251 chr12 56531129 56531129 1 + C T UCEC 56531127 + 56531107 56531147 41 GCCCCACCTCGACCCTGTCACACGACTCCTGATAGCCAGTT GCCCCACCTCGACCCTGTCACATGACTCCTGATAGCCAGTT < 41bp 0.755744198571818 0.478925820235781 0.35493195 0.41613728 prediction 0.511488397143635 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531127 chr12:56531129 nonsynonymous SNV 0.744 4 23 hm5C_associated_SNPs_63493 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531114-56531137
64251 chr14 24108409 24108409 1 + A T rs555965971 24108405 + 24108385 24108425 41 CAGGATCGGCTTTGCCATCGCCCGACGTCTGGCCCGGGACG CAGGATCGGCTTTGCCATCGCCCGTCGTCTGGCCCGGGACG < 41bp 0.755733614706891 0.439164171622224 0.35099483 0.110458225 prediction 0.511467229413781 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108405 chr14:24108409 synonymous SNV . 0 25 hm5C_associated_SNPs_63498 0 0 6 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr16 30409300 30409300 1 + G T rs540599648 30409297 + 30409277 30409317 41 ATCAAGCACCAGCGGACACACCGGGGGGAGCAGCCCCCCCG ATCAAGCACCAGCGGACACACCGTGGGGAGCAGCCCCCCCG < 41bp 0.918008003004178 0.662275641689926 0.9274392 0.586693 prediction 0.511464722628505 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409297 chr16:30409300 synonymous SNV . 0 24 hm5C_associated_SNPs_63500 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:30409260-30409300
64251 chr19 36036220 36036220 1 - C G rs189484278 36036221 - 36036201 36036241 41 GCAGAGATACGGGACGCAGCCGTGAGCACTGTTTTTTATTT GCAGAGATACGGGACGCAGCCCTGAGCACTGTTTTTTATTT < 41bp 0.755731303671358 0.453886977110185 0.2969215 0.09737578 prediction 0.511462607342717 Functional Loss - TMEM147-AS1 ENSG00000236144;ENSG00000236144 ncRNA_exonic;splicing Human other chr19:36036221 chr19:36036220 . . 0 22 hm5C_associated_SNPs_63502 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36036188-36036220
64251 chr16 67943502 67943502 1 + G T LIHC 67943499 + 67943479 67943519 41 ACTCAGTGGACATGTGGGCGCTGGGCGTCATTGCCTACATC ACTCAGTGGACATGTGGGCGCTGTGCGTCATTGCCTACATC < 41bp 0.755721635335887 0.358064280009862 0.42990854 0.09173915 prediction 0.511443270671774 Functional Loss - PSKH1 ENSG00000159792 CDS Human protein_coding chr16:67943499 chr16:67943502 nonsynonymous SNV 0.984 5 24 hm5C_associated_SNPs_63504 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67943478-67943520
64251 chr17 41006598 41006598 1 + C T SKCM 41006596 + 41006576 41006616 41 TGGAGGAGCAGGCCGCCTTCCTCGTGGGAAGCGCCACCCCT TGGAGGAGCAGGCCGCCTTCCTTGTGGGAAGCGCCACCCCT < 41bp 0.786235042795975 0.530528818344764 0.118638724 0.13878465 prediction 0.511412448902421 Functional Loss - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006596 chr17:41006598 synonymous SNV . 0 23 hm5C_associated_SNPs_63508 0 0 1 PPIG POSTAR2 ENCODE chr17:41006505-41006620
64251 chr19 37211381 37211381 1 + A T COAD 37211377 + 37211357 37211397 41 TCATCATCAAAGAACTCATACGGGAGAGAAACCATATAAAT TCATCATCAAAGAACTCATACGGGTGAGAAACCATATAAAT < 41bp 0.844762062890229 0.589062105793003 0.2372328 0.086761594 prediction 0.511399914194452 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37211377 chr19:37211381 synonymous SNV . 0 25 hm5C_associated_SNPs_63509 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:37211373-37211409
64251 chr19 7709499 7709499 1 + G T UCEC 7709497 + 7709477 7709517 41 GACGGCTGACCCCATGCCCGCAGGACCTGGCCATGGGCTCC GACGGCTGACCCCATGCCCGCATGACCTGGCCATGGGCTCC < 41bp 0.785212294241918 0.529554217527492 0.80695283 0.14966068 prediction 0.511316153428852 Functional Loss - STXBP2 ENSG00000076944 splicing Human protein_coding chr19:7709497 chr19:7709499 . 0.854 0 23 hm5C_associated_SNPs_63517 0 0 11 DDX55 POSTAR2 ENCODE chr19:7709497-7709516
64251 chr20 61938933 61938933 1 + G T LUAD 61938931 + 61938911 61938951 41 GCATTGGCCACAGTCACTTCCAGCAGGTCAAGGACTTCCTG GCATTGGCCACAGTCACTTCCATCAGGTCAAGGACTTCCTG < 41bp 0.75565093282078 0.404543905089607 0.6514468 0.0814687 prediction 0.51130186564156 Functional Loss - COL20A1 ENSG00000101203 CDS Human protein_coding chr20:61938931 chr20:61938933 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_63519 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:61938925-61938963
64251 chr12 7289546 7289546 1 + G T UCEC 7289544 + 7289524 7289564 41 TCTACTGGTTCAATGGCACCCAGGCTGTGCAGGTGCCCCTG TCTACTGGTTCAATGGCACCCATGCTGTGCAGGTGCCCCTG < 41bp 0.755645055219505 0.400945424098114 0.4798131 0.15688753 prediction 0.51129011043901 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7289544 chr12:7289546 nonsynonymous SNV 0.968 4 23 hm5C_associated_SNPs_63521 0 0 4 FMR1 POSTAR2 ENCODE chr12:7289521-7289612
64251 chr7 44247777 44247777 1 + G T LUSC 44247774 + 44247754 44247794 41 TGACTAAAGTGCAGGCCGAACTAGATGAGACCAAAATCATT TGACTAAAGTGCAGGCCGAACTATATGAGACCAAAATCATT < 41bp 0.755644116680995 0.372189634866532 0.19082919 0.3912654 prediction 0.511288233361989 Functional Loss - YKT6 ENSG00000106636 CDS Human protein_coding chr7:44247774 chr7:44247777 nonsynonymous SNV 0.685 4 24 hm5C_associated_SNPs_63522 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:44247729-44247791
64251 chr19 46180329 46180329 1 + G C rs76439420 46180325 + 46180305 46180345 41 CCTGGTGCTCGTGGGAGGCTCCGAGGAGGGCCACTTCCGCT CCTGGTGCTCGTGGGAGGCTCCGACGAGGGCCACTTCCGCT < 41bp 0.755643365336764 0.458247151727815 0.89746594 0.71252495 prediction 0.511286730673528 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46180325 chr19:46180329 nonsynonymous SNV 0.955 4 25 hm5C_associated_SNPs_63523 0 0 1 RPS5 POSTAR2 ENCODE chr19:46180327-46180386
64251 chr6 26156742 26156742 1 + G C CESC 26156741 + 26156721 26156761 41 GCGTCTGGGCCCCCGGTGTCCGAGCTCATTACTAAAGCTGT GCGTCTGGGCCCCCGGTGTCCCAGCTCATTACTAAAGCTGT < 41bp 0.755641857872552 0.454645808159571 0.411314 0.051089168 prediction 0.511283715745103 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156741 chr6:26156742 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_63524 0 0 68 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:26156540-26156760
64251 chr5 10262622 10262622 1 + C T COAD 10262620 + 10262600 10262640 41 AGGAGGCGAAACGATCCCTTCACGATGCTTTGTGTGTCATC AGGAGGCGAAACGATCCCTTCATGATGCTTTGTGTGTCATC < 41bp 0.823081664521743 0.567442499530484 0.28049457 0.235941 prediction 0.511278329982518 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10262620 chr5:10262622 synonymous SNV . 0 23 hm5C_associated_SNPs_63526 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:10262597-10262623
64251 chr9 111696783 111696783 1 + A C rs138701847 111696779 + 111696759 111696799 41 AGGTCGCCATGGCTACCGAGCCCGAAGCCGCGGAGCCGGTG AGGTCGCCATGGCTACCGAGCCCGCAGCCGCGGAGCCGGTG < 41bp 0.902213629842085 0.646589404446957 0.21242121 0.255633 prediction 0.511248450790256 Functional Loss - FAM206A ENSG00000119328 CDS Human protein_coding chr9:111696779 chr9:111696783 nonsynonymous SNV 0.081 1 25 hm5C_associated_SNPs_63530 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:111696782-111696783
64251 chr14 102676053 102676053 1 + C T STAD 102676051 + 102676031 102676071 41 TCTGGGAACGCCCCTGTGTCCTCGAATGGAAGATGTTCCCT TCTGGGAACGCCCCTGTGTCCTTGAATGGAAGATGTTCCCT < 41bp 0.780794181598923 0.52518173707827 0.7180913 0.051389724 prediction 0.511224889041305 Functional Loss - WDR20 ENSG00000140153 CDS Human protein_coding chr14:102676051 chr14:102676053 stopgain 0.994 1 23 hm5C_associated_SNPs_63532 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102676040-102676060
64251 chr8 26265602 26265602 1 + C T COAD 26265600 + 26265580 26265620 41 TATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAG TATCAGACTGGTCCAGTAGACCTGAAAACATTCCACCCAAG < 41bp 0.803256550856279 0.547649701297434 0.0721654 0.12170684 prediction 0.51121369911769 Functional Loss - BNIP3L ENSG00000104765 CDS Human protein_coding chr8:26265600 chr8:26265602 synonymous SNV . 0 23 hm5C_associated_SNPs_63536 0 0 7 BUD13 POSTAR2 ENCODE chr8:26265510-26265630
64251 chr17 48548429 48548429 1 + C T HNSC 48548427 + 48548407 48548447 41 GAGAACAGTCCCGTGACATTCGCGCACTTCCCTGAGGACAC GAGAACAGTCCCGTGACATTCGTGCACTTCCCTGAGGACAC < 41bp 0.755597267143283 0.482005868288808 0.34499675 0.39026523 prediction 0.511194534286567 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48548427 chr17:48548429 nonsynonymous SNV 0.039 0 23 hm5C_associated_SNPs_63537 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48548424-48548457
64251 chr1 168161554 168161554 1 + A C rs181726518 168161550 + 168161530 168161570 41 GCTGAGATCGCACCACTGCACTCCAGCCCTCCAGCCTGGGC GCTGAGATCGCACCACTGCACTCCCGCCCTCCAGCCTGGGC < 41bp 0.755596689249894 0.387416015767292 0.8532038 0.051174313 prediction 0.511193378499788 Functional Loss - TIPRL ENSG00000143155 UTR3 Human protein_coding chr1:168161550 chr1:168161554 . . 0 25 hm5C_associated_SNPs_63538 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221660 chr1:168161540-168161560
64251 chrX 30236712 30236712 1 + G T COAD 30236710 + 30236690 30236730 41 CAGCCATCATGCCTCGTGGTCAGAAGAGTAAGCTCCGTGCC CAGCCATCATGCCTCGTGGTCATAAGAGTAAGCTCCGTGCC < 41bp 0.884014680045101 0.628442081968228 0.87440187 0.51436096 prediction 0.511145196153746 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236710 chrX:30236712 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_63541 0 0 2 DDX3X POSTAR2 ENCODE chrX:30236692-30236760
64251 chr17 61908724 61908724 1 + C T UCEC 61908722 + 61908702 61908742 41 AATAGGATTGATATCCTGGACTCGGCACTGCTTCGCCCAGG AATAGGATTGATATCCTGGACTTGGCACTGCTTCGCCCAGG < 41bp 0.798757935816637 0.543198056459459 0.07453719 0.064040154 prediction 0.511119758714355 Functional Loss - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908722 chr17:61908724 nonsynonymous SNV 0.800 2 23 hm5C_associated_SNPs_63543 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:61908692-61908734
64251 chr6 149699878 149699878 1 + A C rs541985795 149699874 + 149699854 149699894 41 CCTCATCTCAACAGCCAAATCAGCAAGGCCACCAGACCTCT CCTCATCTCAACAGCCAAATCAGCCAGGCCACCAGACCTCT < 41bp 0.755554050097946 0.338910623692689 0.11181384 0.09379125 prediction 0.511108100195892 Functional Loss - TAB2 ENSG00000055208 CDS Human protein_coding chr6:149699874 chr6:149699878 nonsynonymous SNV 0.786 0 25 hm5C_associated_SNPs_63545 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:149699791-149699957
64251 chr1 86046478 86046478 1 + G C rs536070981 86046477 + 86046457 86046497 41 GAGCGCCCCCGAGCAGCGCCCGCGCCCTCCGCGCCTTCTCC GAGCGCCCCCGAGCAGCGCCCCCGCCCTCCGCGCCTTCTCC < 41bp 0.755548679899394 0.472217704799754 0.42502642 0.2766263 prediction 0.511097359798788 Functional Loss - CYR61 ENSG00000142871 UTR5 Human protein_coding chr1:86046477 chr1:86046478 . . 0 22 hm5C_associated_SNPs_63546 0 0 1 DDX3X POSTAR2 ENCODE chr1:86046456-86046507
64251 chr16 2580743 2580743 1 + G T LUSC 2580741 + 2580721 2580761 41 GCCAGGGAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAG GCCAGGGAAGAACCACCTGCCTTGGCAGGGCCTCGCCTGAG < 41bp 0.869863137511749 0.614316111294375 0.30565882 0.07794988 prediction 0.511094052434746 Functional Loss - AMDHD2;CEMP1 ENSG00000162066;ENSG00000205923 CDS Human other chr16:2580741 chr16:2580743 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_63547 0 0 18 AARS POSTAR2 ENCODE chr16:2580707-2580755
64251 chr19 42584642 42584642 1 + G T STAD 42584639 + 42584619 42584659 41 CTGCTGGAGGTGCACCAGCTCGTGGTCCATGCCGGGCGCCA CTGCTGGAGGTGCACCAGCTCGTTGTCCATGCCGGGCGCCA < 41bp 0.755545924995087 0.366706776701427 0.75027454 0.2242566 prediction 0.511091849990174 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42584639 chr19:42584642 synonymous SNV . 0 24 hm5C_associated_SNPs_63548 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42584640-42584660
64251 chr17 49340655 49340655 1 + G C BLCA 49340654 + 49340634 49340674 41 GGTTCAAGAACATGAAGACTCGGGTGACTCAGAAGTGGAGA GGTTCAAGAACATGAAGACTCCGGTGACTCAGAAGTGGAGA < 41bp 0.755543851890321 0.445022935162322 0.9134463 0.46039644 prediction 0.511087703780642 Functional Loss - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49340654 chr17:49340655 synonymous SNV . 0 22 hm5C_associated_SNPs_63549 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:49340609-49340681
64251 chr7 21940666 21940666 1 - C G LUAD 21940667 - 21940647 21940687 41 GGCATGCCAGCTCCTTGAGACGGGCTTCAACAATGGTTCCT GGCATGCCAGCTCCTTGAGACCGGCTTCAACAATGGTTCCT < 41bp 0.755542937835333 0.498774300671805 0.75718725 0.25713557 prediction 0.511085875670666 Functional Loss - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21940667 chr7:21940666 nonsynonymous SNV 0.782 2 22 hm5C_associated_SNPs_63550 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr7:21940637-21940668
64251 chr10 75528797 75528797 1 + T C LAML 75528796 + 75528776 75528816 41 GTAGATTTCTTTGGAGCTTTCTACATGAGCAACACGACAGA GTAGATTTCTTTGGAGCTTTCCACATGAGCAACACGACAGA < 41bp 0.787646820129876 0.532104525270855 0.9214884 0.51839876 prediction 0.511084589718042 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75528796 chr10:75528797 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_63551 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75528769-75528804
64251 chr2 118579637 118579637 1 + G T UCEC 118579635 + 118579615 118579655 41 GCCGTCTGCTGGACCATATGCAGGTAAGAGATGTAGTGCTT GCCGTCTGCTGGACCATATGCATGTAAGAGATGTAGTGCTT < 41bp 0.755536951164058 0.437127100191409 0.87397623 0.32798177 prediction 0.511073902328116 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579635 chr2:118579637 nonsynonymous SNV 0.955 2 23 hm5C_associated_SNPs_63553 0 0 10 GRWD1 POSTAR2 ENCODE chr2:118579583-118579639
64251 chr7 99045771 99045771 1 + G T LAML 99045769 + 99045749 99045789 41 ATGTGTCCGTTTCGCCACATCAGTGGTGAGAAGACAGTTGT ATGTGTCCGTTTCGCCACATCATTGGTGAGAAGACAGTTGT < 41bp 0.755532892881025 0.411918645857933 0.36041695 0.22719702 prediction 0.51106578576205 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99045769 chr7:99045771 nonsynonymous SNV 0.761 1 23 hm5C_associated_SNPs_63554 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:99045751-99045785
64251 chr6 38120051 38120051 1 + C T STAD 38120049 + 38120029 38120069 41 TACATCGCCTCCCCGAGCAGCACGACTGCACATTCGACCAC TACATCGCCTCCCCGAGCAGCATGACTGCACATTCGACCAC < 41bp 0.755516466123506 0.495884511505913 0.21109483 0.20398289 prediction 0.511032932247013 Functional Loss - ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38120049 chr6:38120051 synonymous SNV . 0 23 hm5C_associated_SNPs_63559 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:38120013-38120051
64251 chr14 53178230 53178230 1 + G T LUAD 53178228 + 53178208 53178248 41 GAGGGCTATCAGAACAGATCCGGGAATTAAGAGAGGTTGGT GAGGGCTATCAGAACAGATCCGTGAATTAAGAGAGGTTGGT < 41bp 0.755500495814353 0.438251178676385 0.90074277 0.6504992 prediction 0.511000991628706 Functional Loss - PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53178228 chr14:53178230 synonymous SNV . 0 23 hm5C_associated_SNPs_63563 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:53178214-53178259
64251 chr15 80465430 80465430 1 + C T HNSC 80465428 + 80465408 80465448 41 GAGTTTTGGGACCACTGTCTCTCCGTGGGTGGTGCCCATGG GAGTTTTGGGACCACTGTCTCTTCGTGGGTGGTGCCCATGG < 41bp 0.826634184819905 0.571145706847048 0.6107258 0.21195367 prediction 0.510976955945716 Functional Loss - FAH ENSG00000103876 CDS Human protein_coding chr15:80465428 chr15:80465430 nonsynonymous SNV 0.760 5 23 hm5C_associated_SNPs_63565 0 0 2 RPS3 POSTAR2 ENCODE chr15:80465379-80465487
64251 chrX 154002935 154002935 1 + C T UCEC 154002933 + 154002913 154002953 41 CTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCAC CTGGACAAGCATGGGAAGCCCATAGACAGCACACCTGCCAC < 41bp 0.783889330423978 0.528419006331511 0.1517092 0.24999979 prediction 0.510940648184934 Functional Loss - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154002933 chrX:154002935 nonsynonymous SNV 0.420 2 23 hm5C_associated_SNPs_63571 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:154002878-154002941
64251 chr11 67378902 67378902 1 + C T SKCM 67378900 + 67378880 67378920 41 TCACGGGCGGCTGGGACAACCTCCTTGCTGTGATCCCTGGC TCACGGGCGGCTGGGACAACCTTCTTGCTGTGATCCCTGGC < 41bp 0.755468156326061 0.477973213503069 0.7167977 0.4973 prediction 0.510936312652122 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378900 chr11:67378902 synonymous SNV . 0 23 hm5C_associated_SNPs_63572 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:67378879-67378909
64251 chr8 28420373 28420373 1 + C T ESCA 28420371 + 28420351 28420391 41 ACTACCTCATGGCAGCATGTCACGACTAACAGATCACTCCA ACTACCTCATGGCAGCATGTCATGACTAACAGATCACTCCA < 41bp 0.782744880960011 0.527282734523853 0.098991245 0.12638912 prediction 0.510924292872316 Functional Loss - FZD3 ENSG00000104290 CDS Human protein_coding chr8:28420371 chr8:28420373 stopgain 0.999 0 23 hm5C_associated_SNPs_63574 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:28420362-28420390
64251 chr2 176982281 176982281 1 + C T UCEC 176982279 + 176982259 176982299 41 CTGAGGTCTCCGTGTCCAGTCCCGAAGTGCAGGAGAAGGAA CTGAGGTCTCCGTGTCCAGTCCTGAAGTGCAGGAGAAGGAA < 41bp 0.760925766344667 0.505465722908214 0.33622915 0.26506186 prediction 0.510920086872906 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982279 chr2:176982281 synonymous SNV . 0 23 hm5C_associated_SNPs_63577 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:176982243-176982283
64251 chr4 151504859 151504859 1 + G C HNSC 151504855 + 151504835 151504875 41 GACCGGCAAGCAGAGCTCGGCAGAGAGCGACGCCTGGGTGC GACCGGCAAGCAGAGCTCGGCAGACAGCGACGCCTGGGTGC < 41bp 0.811416882199266 0.555971990928931 0.80878145 0.35976183 prediction 0.51088978254067 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504855 chr4:151504859 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_63578 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr4:151504833-151504869
64251 chr17 7320633 7320633 1 + G T LUAD 7320631 + 7320611 7320651 41 GGACTCACGGGACTACTCCACGGAGCTGAGCGTCACCGTGG GGACTCACGGGACTACTCCACGTAGCTGAGCGTCACCGTGG < 41bp 0.755428268432199 0.409978315867446 0.9161757 0.42087668 prediction 0.510856536864398 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320631 chr17:7320633 stopgain 0.959 1 23 hm5C_associated_SNPs_63583 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7320594-7320633
64251 chr3 129214396 129214396 1 + C T rs116819033 129214394 + 129214374 129214414 41 AACTGTACAAGAGGAGTGGGCACGAGAACCTCGCGCTTGAA AACTGTACAAGAGGAGTGGGCATGAGAACCTCGCGCTTGAA < 41bp 0.762528235013348 0.507109246963236 0.6155346 0.4362019 prediction 0.510837976100224 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129214394 chr3:129214396 synonymous SNV . 0 23 hm5C_associated_SNPs_63585 1 0 1 PPIG POSTAR2 ENCODE chr3:129214335-129214407
64251 chr9 134098265 134098265 1 + A T UCEC 134098261 + 134098241 134098281 41 ACCCACTGGCACTTTCAGCTCTGGAGGAGGAAGTGTGGCAT ACCCACTGGCACTTTCAGCTCTGGTGGAGGAAGTGTGGCAT < 41bp 0.861999655390395 0.606584598014521 0.8396356 0.30546165 prediction 0.510830114751749 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134098261 chr9:134098265 synonymous SNV . 0 25 hm5C_associated_SNPs_63586 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:134098239-134098284
64251 chr2 158140834 158140834 1 + A T LUSC 158140830 + 158140810 158140850 41 GTTCACAATAACCTCCCAACCACCAGTGTCATCATGTGCTT GTTCACAATAACCTCCCAACCACCTGTGTCATCATGTGCTT < 41bp 0.868978453891782 0.613578624783622 0.03387159 0.043063313 prediction 0.51079965821632 Functional Loss - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158140830 chr2:158140834 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_63590 0 0 2 YBX3 POSTAR2 ENCODE chr2:158140803-158140880
64251 chr19 48830120 48830120 1 + G T LUAD 48830117 + 48830097 48830137 41 CAGCCATGTCACTCCTCTTGCTGGTGGTCTCAGCCCTTCAC CAGCCATGTCACTCCTCTTGCTGTTGGTCTCAGCCCTTCAC < 41bp 0.755396781479135 0.35757215300321 0.14967841 0.039102376 prediction 0.510793562958269 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48830117 chr19:48830120 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_63591 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr19:48830099-48830132
64251 chr19 48830119 48830119 1 + G T LUAD 48830117 + 48830097 48830137 41 CAGCCATGTCACTCCTCTTGCTGGTGGTCTCAGCCCTTCAC CAGCCATGTCACTCCTCTTGCTTGTGGTCTCAGCCCTTCAC < 41bp 0.755396781479135 0.40317658291008 0.14967841 0.06591469 prediction 0.510793562958269 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48830117 chr19:48830119 synonymous SNV . 0 23 hm5C_associated_SNPs_63592 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr19:48830099-48830132
64251 chr22 26114243 26114243 1 + C T COAD 26114241 + 26114221 26114261 41 TGGGGAAGGACTGTATTATGCACGGGTACATGCTGAAACTG TGGGGAAGGACTGTATTATGCATGGGTACATGCTGAAACTG < 41bp 0.764589270000927 0.509202733266457 0.26717427 0.27910727 prediction 0.51077307346894 Functional Loss - GRK3 ENSG00000100077 CDS Human protein_coding chr22:26114241 chr22:26114243 synonymous SNV . 0 23 hm5C_associated_SNPs_63596 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:26114238-26114267
64251 chr1 41236485 41236485 1 + G T GBM 41236483 + 41236463 41236503 41 CCTCCGACGGGCAGGCCCCCCAGGTGACCGGCGACTGAGGG CCTCCGACGGGCAGGCCCCCCATGTGACCGGCGACTGAGGG < 41bp 0.877184903884236 0.621807247628202 0.9016516 0.1996792 prediction 0.510755312512067 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41236483 chr1:41236485 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63598 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41236480-41236500
64251 chr1 89889961 89889961 1 + G T SKCM 89889959 + 89889939 89889979 41 ACTGAGAAGATGGAGAGCGACAGGGTCCAGTTGCTGGAAGA ACTGAGAAGATGGAGAGCGACATGGTCCAGTTGCTGGAAGA < 41bp 0.847630298856968 0.592256293994157 0.73318744 0.19330218 prediction 0.510748009725621 Functional Loss - GBP1P1 ENSG00000225492 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr1:89889959 chr1:89889961 . . 0 23 hm5C_associated_SNPs_63599 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:89889951-89889984
64251 chr1 162468011 162468011 1 + G T CHOL 162468009 + 162467989 162468029 41 TCTGCCGCCGAGTATGGTTTCCGCAAAGAGAGGGCGGCGCT TCTGCCGCCGAGTATGGTTTCCTCAAAGAGAGGGCGGCGCT < 41bp 0.755370977612197 0.417134012331889 0.28324646 0.7513337 prediction 0.510741955224393 Functional Loss - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162468009 chr1:162468011 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_63601 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:162468000-162468020
64251 chr12 117013966 117013966 1 + C T COAD 117013964 + 117013944 117013984 41 TAATTAGAAGGCGCTTACAGCTCAATGCTAATCAGGCCTTC TAATTAGAAGGCGCTTACAGCTTAATGCTAATCAGGCCTTC < 41bp 0.796584261027953 0.541216394783712 0.2424624 0.09270772 prediction 0.510735732488482 Functional Loss - MAP1LC3B2 ENSG00000171471 CDS Human other chr12:117013964 chr12:117013966 synonymous SNV . 0 23 hm5C_associated_SNPs_63602 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:117013945-117013989
64251 chr12 72287041 72287041 1 + G T SARC 72287039 + 72287019 72287059 41 GAACACTTCTTGTGAATTGTCAGAATAAGAGTCTTTCACAG GAACACTTCTTGTGAATTGTCATAATAAGAGTCTTTCACAG < 41bp 0.755365553502253 0.434089745834482 0.41985932 0.09499344 prediction 0.510731107004505 Functional Loss - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72287039 chr12:72287041 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_63603 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:72287019-72287080
64251 chr1 22843876 22843876 1 + G C LUSC 22843872 + 22843852 22843892 41 CGCCACGTGAGGACCCACACCGGGGACAAGCCCTATGTCTG CGCCACGTGAGGACCCACACCGGGCACAAGCCCTATGTCTG < 41bp 0.821963477082707 0.566601251813998 0.89809227 0.6776204 prediction 0.510724450537419 Functional Loss - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22843872 chr1:22843876 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_63605 0 0 1 GRWD1 POSTAR2 ENCODE chr1:22843826-22843905
64251 chr1 1430968 1430968 1 + A T rs189192055 1430964 + 1430944 1430984 41 ACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGG ACCGACAGAAGATGCGCTGGCTGATGGCGGAGGGGCCTGGG < 41bp 0.846282785171903 0.590928901975743 0.52487445 0.2173976 prediction 0.510707766392321 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1430964 chr1:1430968 nonsynonymous SNV 0.010 2 25 hm5C_associated_SNPs_63607 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:1430954-1431012
64251 chr1 60314090 60314090 1 + G T HNSC 60314087 + 60314067 60314107 41 GCAAGCAGGTGAAAACTTTACAGGAAACCAACATGATGTAT GCAAGCAGGTGAAAACTTTACAGTAAACCAACATGATGTAT < 41bp 0.755349916940433 0.407887345472168 0.7800214 0.37429908 prediction 0.510699833880867 Functional Loss - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60314087 chr1:60314090 stopgain 0.997 1 24 hm5C_associated_SNPs_63610 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:60314049-60314092
64251 chr11 117060739 117060739 1 + C T SKCM 117060737 + 117060717 117060757 41 GCGCCCACCCACTGGGCAATCTCAGGTGGGGGTCATGCTGG GCGCCCACCCACTGGGCAATCTTAGGTGGGGGTCATGCTGG < 41bp 0.780023020227063 0.524674307784919 0.2038346 0.31899983 prediction 0.510697424884287 Functional Loss - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117060737 chr11:117060739 synonymous SNV . 0 23 hm5C_associated_SNPs_63611 0 0 2 DDX24 POSTAR2 ENCODE chr11:117060713-117060742
64251 chr1 36748279 36748279 1 + C T BLCA 36748277 + 36748257 36748297 41 GTCCCGAAGCCGATCTCTCTCTCGTTCAAGGAAGCGCAGGC GTCCCGAAGCCGATCTCTCTCTTGTTCAAGGAAGCGCAGGC < 41bp 0.755344638224099 0.4725046872159 0.064372 0.06274748 prediction 0.510689276448199 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36748277 chr1:36748279 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63612 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36748241-36748279
64251 chr12 62860816 62860816 1 + G T rs184094253 62860814 + 62860794 62860834 41 GAGAAAAGCCAGAGGTGTTGCGGGGAAGCTGCTGGGGGACG GAGAAAAGCCAGAGGTGTTGCGTGGAAGCTGCTGGGGGACG < 41bp 0.855787871219703 0.600447212873901 0.915628 0.84482336 prediction 0.510681316691603 Functional Loss - MON2 ENSG00000061987 UTR5 Human protein_coding chr12:62860814 chr12:62860816 . . 0 23 hm5C_associated_SNPs_63614 0 0 6 FMR1 POSTAR2 ENCODE chr12:62860761-62860829
64251 chr16 66638408 66638408 1 + G C rs576030809 66638407 + 66638387 66638427 41 TGGGAGCTCCGAAGGGGTGCCGGGGCGGTGATCGGGAGGTC TGGGAGCTCCGAAGGGGTGCCCGGGCGGTGATCGGGAGGTC < 41bp 0.84011522977008 0.584774709663399 0.9217977 0.9075824 prediction 0.510681040213362 Functional Loss - CMTM3 ENSG00000140931 UTR5 Human protein_coding chr16:66638407 chr16:66638408 . . 0 22 hm5C_associated_SNPs_63615 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:66638381-66638416
64251 chr16 3714414 3714414 1 - G A SKCM 3714416 - 3714396 3714436 41 TACGAGTCCTCGGCGCTGCCCTCCGGGCAGCTAACCAGCCT TACGAGTCCTCGGCGCTGCCCTTCGGGCAGCTAACCAGCCT < 41bp 0.755339623563441 0.478806178553266 0.52927816 0.30117023 prediction 0.510679247126882 Functional Loss - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3714416 chr16:3714414 nonsynonymous SNV 0.038 2 23 hm5C_associated_SNPs_63616 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:3714390-3714418
64251 chr10 99498294 99498294 1 + G T UCEC 99498291 + 99498271 99498311 41 CTGAGCCCCAGCGTGATGCCCGAGGCTCCCCTGGAGTCTCC CTGAGCCCCAGCGTGATGCCCGATGCTCCCCTGGAGTCTCC < 41bp 0.755337665901684 0.362706157321971 0.8819741 0.27650422 prediction 0.510675331803367 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99498291 chr10:99498294 nonsynonymous SNV 0.008 2 24 hm5C_associated_SNPs_63617 0 0 5 BUD13 POSTAR2 ENCODE chr10:99498252-99498298
64251 chr4 108955681 108955681 1 + A T rs532458283 108955677 + 108955657 108955697 41 AGTGATTATTACACCAGTTACAGCAGTAATAGATTCTCCAT AGTGATTATTACACCAGTTACAGCTGTAATAGATTCTCCAT < 41bp 0.755327058850447 0.46576388710058 0.5791215 0.28117323 prediction 0.510654117700893 Functional Loss - HADH ENSG00000138796 UTR3 Human protein_coding chr4:108955677 chr4:108955681 . . 0 25 hm5C_associated_SNPs_63619 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr4:108955660-108955710
64251 chr19 36255943 36255943 1 + C T SKCM 36255941 + 36255921 36255961 41 CCTTCTCCCTGCAGCAAAGCCTCCATCTCCTCCTCCTCCTC CCTTCTCCCTGCAGCAAAGCCTTCATCTCCTCCTCCTCCTC < 41bp 0.821876232628027 0.56655357237422 0.96656716 0.058219343 prediction 0.510645320507615 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36255941 chr19:36255943 nonsynonymous SNV 0.957 2 23 hm5C_associated_SNPs_63621 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36255916-36255954
64251 chr6 148664260 148664260 1 + G T BLCA 148664258 + 148664238 148664278 41 AGCCTGAGCCCGAGCCCGAGCCGGAGCCCGAGCCCGCGCCG AGCCTGAGCCCGAGCCCGAGCCTGAGCCCGAGCCCGCGCCG < 41bp 0.887686204677907 0.632394761992902 0.8705963 0.40778077 prediction 0.51058288537001 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148664258 chr6:148664260 synonymous SNV . 0 23 hm5C_associated_SNPs_63632 0 0 1 PPIG POSTAR2 ENCODE chr6:148664123-148664270
64251 chr8 144680424 144680424 1 + G T KICH 144680422 + 144680402 144680442 41 GCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGGAG GCACTCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAG < 41bp 0.755280881262517 0.425378932141593 0.76891303 0.20994651 prediction 0.510561762525034 Functional Loss - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144680422 chr8:144680424 synonymous SNV . 0 23 hm5C_associated_SNPs_63633 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:144680424-144680425
64251 chr7 44797501 44797501 1 + G C LUSC 44797497 + 44797477 44797517 41 TTTCTGCAGCATGGAGGTCCCCGGGGGCCTAGTGTCCCCGC TTTCTGCAGCATGGAGGTCCCCGGCGGCCTAGTGTCCCCGC < 41bp 0.834623807894818 0.579349562610184 0.90711844 0.7757307 prediction 0.510548490569267 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44797497 chr7:44797501 nonsynonymous SNV 0.335 4 25 hm5C_associated_SNPs_63636 0 0 6 BUD13 POSTAR2 ENCODE chr7:44797497-44797514
64251 chr1 156595170 156595170 1 + G T UCEC 156595167 + 156595147 156595187 41 TATGGGACCTACTGCTACGCCGAGAATTAGGCGCCCACCGT TATGGGACCTACTGCTACGCCGATAATTAGGCGCCCACCGT < 41bp 0.910088072721972 0.654825687277432 0.5199795 0.11838743 prediction 0.51052477088908 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156595167 chr1:156595170 nonsynonymous SNV 0.590 1 24 hm5C_associated_SNPs_63640 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:156595170-156595206
64251 chr16 31046343 31046343 1 + A C LUAD 31046342 + 31046322 31046362 41 GAACTATAACTCCGTCAACACAAGAATGAGAAAAACCCAGG GAACTATAACTCCGTCAACACCAGAATGAGAAAAACCCAGG < 41bp 0.755255814573411 0.498927328901701 0.4442869 0.2798759 prediction 0.510511629146821 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31046342 chr16:31046343 synonymous SNV . 0 22 hm5C_associated_SNPs_63641 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31046314-31046345
64251 chr9 135906488 135906488 1 + G T CESC 135906485 + 135906465 135906505 41 CGCATGGTGTGCGTGGAGTACCCGGGAGTGGTGCGTGATGT CGCATGGTGTGCGTGGAGTACCCTGGAGTGGTGCGTGATGT < 41bp 0.755245846726982 0.378755232017232 0.43501925 0.22671708 prediction 0.510491693453964 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906485 chr9:135906488 synonymous SNV . 0 24 hm5C_associated_SNPs_63643 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135906473-135906494
64251 chr5 169015579 169015579 1 + G C HNSC 169015575 + 169015555 169015595 41 TAATGAAATGATGACCATGACTGAGGTAGGACTCTGGACTC TAATGAAATGATGACCATGACTGACGTAGGACTCTGGACTC < 41bp 0.80066536600939 0.545420394985855 0.41462946 0.34202906 prediction 0.510489942047071 Functional Loss - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169015575 chr5:169015579 nonsynonymous SNV 0.774 4 25 hm5C_associated_SNPs_63644 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:169015483-169015579
64251 chr19 41396876 41396876 1 + G C rs148809982 41396872 + 41396852 41396892 41 GTTGAGCTGAGAGGGAAGAACAGGGAGACTGGAAATATGAA GTTGAGCTGAGAGGGAAGAACAGGCAGACTGGAAATATGAA < 41bp 0.811458816714861 0.556215974516572 0.63466406 0.28461295 prediction 0.510485684396578 Functional Loss - CYP2G1P ENSG00000130612 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr19:41396872 chr19:41396876 . . 0 25 hm5C_associated_SNPs_63645 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:41396862-41396882
64251 chr9 2110307 2110307 1 + G T OV 2110305 + 2110285 2110325 41 GCTGAAGAAATTCAATGAACCTGGATCCCAGTATTTCATTT GCTGAAGAAATTCAATGAACCTTGATCCCAGTATTTCATTT < 41bp 0.755225126738113 0.42779127228386 0.10341841 0.021945924 prediction 0.510450253476227 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2110305 chr9:2110307 stopgain 1.000 1 23 hm5C_associated_SNPs_63650 0 0 1 GRWD1 POSTAR2 ENCODE chr9:2110251-2110312
64251 chr13 101101515 101101515 1 + C T UCEC 101101513 + 101101493 101101533 41 GTTTGTTTTTTAGTGTCTTTCTCGAGAAGCAGGTGGAAACA GTTTGTTTTTTAGTGTCTTTCTTGAGAAGCAGGTGGAAACA < 41bp 0.755220368875955 0.474046264793969 0.8604242 0.2373293 prediction 0.510440737751911 Functional Loss - PCCA ENSG00000175198 CDS Human protein_coding chr13:101101513 chr13:101101515 stopgain 1.000 1 23 hm5C_associated_SNPs_63652 0 0 1 PPIG POSTAR2 ENCODE chr13:101101509-101101541
64251 chr6 31785428 31785428 1 + G T LUAD 31785425 + 31785405 31785445 41 TCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCCACCATTG TCAGGGTCCCAAGGGAGGGTCTGTGTCAGGCCCCACCATTG < 41bp 0.755197939119836 0.372190308592078 0.89781106 0.29241252 prediction 0.510395878239672 Functional Loss - HSPA1A ENSG00000204389 CDS Human protein_coding chr6:31785425 chr6:31785428 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_63659 0 0 23 CDC40 POSTAR2 ENCODE chr6:31785333-31785439
64251 chr9 124535457 124535457 1 + C T UCEC 124535455 + 124535435 124535475 41 CACTGCCGCGGAGGAGCTGGCTCGGCGGCCCGGTGAGCTGG CACTGCCGCGGAGGAGCTGGCTTGGCGGCCCGGTGAGCTGG < 41bp 0.755197467536713 0.498678908916506 0.26702803 0.18318379 prediction 0.510394935073427 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535455 chr9:124535457 nonsynonymous SNV 0.622 3 23 hm5C_associated_SNPs_63660 0 0 1 PPIG POSTAR2 ENCODE chr9:124535418-124535465
64251 chr3 23996179 23996179 1 + G T UCEC 23996176 + 23996156 23996196 41 TCTGATACCAATGGTAATCCCAAGAATGGTGATCTCGCCAA TCTGATACCAATGGTAATCCCAATAATGGTGATCTCGCCAA < 41bp 0.905873847986492 0.650680173129219 0.5290953 0.3359762 prediction 0.510387349714546 Functional Loss - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:23996176 chr3:23996179 nonsynonymous SNV 0.345 1 24 hm5C_associated_SNPs_63661 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr3:23996143-23996197
64251 chr5 52942083 52942083 1 + A C rs31304 52942079 + 52942059 52942099 41 GTAGGATATCACTACTTTAACTGGAGTTCCAGAAGAGCATA GTAGGATATCACTACTTTAACTGGCGTTCCAGAAGAGCATA < 41bp 0.895840106359214 0.640651828537693 0.41486698 0.42522717 prediction 0.510376555643042 Functional Loss - NDUFS4 ENSG00000164258 CDS Human protein_coding chr5:52942079 chr5:52942083 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_63665 3 0 2 IGF2BP1 POSTAR2 ENCODE chr5:52942061-52942112
64251 chr17 5271721 5271721 1 + G T UCEC 5271719 + 5271699 5271739 41 AGATCTTACTTGAAGAGTTACAGCAGGGGCTTTCCCAGGCA AGATCTTACTTGAAGAGTTACATCAGGGGCTTTCCCAGGCA < 41bp 0.755168462701835 0.432897464090611 0.27746624 0.27283877 prediction 0.510336925403669 Functional Loss - RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5271719 chr17:5271721 nonsynonymous SNV 0.922 4 23 hm5C_associated_SNPs_63667 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:5271705-5271749
64251 chr1 100960422 100960422 1 + G T LUAD 100960419 + 100960399 100960439 41 AAATGAAAAATGGTATAACCCAGGGAGACAAACTACGTGCC AAATGAAAAATGGTATAACCCAGTGAGACAAACTACGTGCC < 41bp 0.755155177306824 0.388205729370811 0.92777264 0.88810027 prediction 0.510310354613648 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100960419 chr1:100960422 stopgain 0.995 1 24 hm5C_associated_SNPs_63669 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:100960412-100960441
64251 chr2 96072753 96072753 1 + C T COAD 96072751 + 96072731 96072771 41 AACCTTCCTGGCTCCAGTCACACGACCAGATAAGGTGGTGT AACCTTCCTGGCTCCAGTCACATGACCAGATAAGGTGGTGT < 41bp 0.793209195423028 0.538056214441782 0.3149432 0.44732907 prediction 0.510305961962493 Functional Loss - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96072751 chr2:96072753 stopgain 0.993 0 23 hm5C_associated_SNPs_63670 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:96072729-96072754
64251 chr1 226026434 226026434 1 + C T OV 226026432 + 226026412 226026452 41 CGAAGCCCTTGCTGATGGTGCACGGCTGGCCCGGCTCTTTC CGAAGCCCTTGCTGATGGTGCATGGCTGGCCCGGCTCTTTC < 41bp 0.775372769093572 0.520241765308288 0.24335614 0.22102311 prediction 0.510262007570568 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026432 chr1:226026434 synonymous SNV . 0 23 hm5C_associated_SNPs_63674 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:226026411-226026445
64251 chr8 43054619 43054619 1 + C T UCEC 43054617 + 43054597 43054637 41 AGCTGAAGGACAACCAGTCCCACAAGGAGCACCTGACTCAG AGCTGAAGGACAACCAGTCCCATAAGGAGCACCTGACTCAG < 41bp 0.786296462478806 0.531178125885162 0.16484052 0.19975281 prediction 0.510236673187288 Functional Loss - HGSNAT ENSG00000165102 CDS Human protein_coding chr8:43054617 chr8:43054619 synonymous SNV . 0 23 hm5C_associated_SNPs_63675 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:43054568-43054620
64251 chr16 84778424 84778424 1 + A T SKCM 84778420 + 84778400 84778440 41 ACTAAAGAAGCAAGCTATGGCTCCATCGACTGCCAGTACCC ACTAAAGAAGCAAGCTATGGCTCCTTCGACTGCCAGTACCC < 41bp 0.75511125331565 0.406926085880399 0.8481736 0.040441096 prediction 0.510222506631299 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778420 chr16:84778424 nonsynonymous SNV 0.044 1 25 hm5C_associated_SNPs_63679 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:84778402-84778463
64251 chr21 45110303 45110303 1 + T C UCEC 45110302 + 45110282 45110322 41 GAGCAGCACTGCCACCCACCCTCCAGGCCCTGCCGTCCAGG GAGCAGCACTGCCACCCACCCCCCAGGCCCTGCCGTCCAGG < 41bp 0.792710861802115 0.537627500422117 0.9411277 0.19787529 prediction 0.510166722759997 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45110302 chr21:45110303 synonymous SNV . 0 22 hm5C_associated_SNPs_63688 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45110279-45110317
64251 chr11 47594985 47594985 1 + G T UCEC 47594982 + 47594962 47595002 41 TGTCCACACATTATCACCTACGCGATAATAAATGACTGCGT TGTCCACACATTATCACCTACGCTATAATAAATGACTGCGT < 41bp 0.755066992932163 0.457570913940377 0.9047748 0.25331467 prediction 0.510133985864326 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594982 chr11:47594985 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_63691 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47594976-47595029
64251 chr17 38242991 38242991 1 + C T SKCM 38242989 + 38242969 38243009 41 ATTGGCCAGTCACCCATTGTCTCCATGCCGGACGGAGACAA ATTGGCCAGTCACCCATTGTCTTCATGCCGGACGGAGACAA < 41bp 0.836740549263061 0.581713295926406 0.9555136 0.32215714 prediction 0.510054506673312 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38242989 chr17:38242991 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63701 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:38242972-38242995
64251 chrX 100880308 100880308 1 + A C UCEC 100880307 + 100880287 100880327 41 GAAACGGGCTTCCCCCAATTCAGATGATACCGTTTTGTCCC GAAACGGGCTTCCCCCAATTCCGATGATACCGTTTTGTCCC < 41bp 0.75986960463893 0.504844734843363 0.3430934 0.172728 prediction 0.510049739591135 Functional Loss - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880307 chrX:100880308 synonymous SNV . 0 22 hm5C_associated_SNPs_63702 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chrX:100880294-100880309
64251 chrX 64949442 64949442 1 + A C PRAD 64949438 + 64949418 64949458 41 TGCAAGTGAAAGAGGGCATTCTCAATGATGATATTTACTGC TGCAAGTGAAAGAGGGCATTCTCACTGATGATATTTACTGC < 41bp 0.75499150904945 0.318703783163835 0.9173648 0.27302212 prediction 0.5099830180989 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64949438 chrX:64949442 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_63705 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64949380-64949480
64251 chr16 20435279 20435279 1 + C T LUAD 20435277 + 20435257 20435297 41 GAATCTGACATCTTCTGGAACACGACTGACACTGGCTGGGT GAATCTGACATCTTCTGGAACATGACTGACACTGGCTGGGT < 41bp 0.794867080921394 0.539880165732949 0.08206862 0.12668276 prediction 0.509973830376889 Functional Loss - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20435277 chr16:20435279 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_63706 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20435259-20435385
64251 chr19 4491797 4491797 1 + C T SKCM 4491795 + 4491775 4491815 41 GAAGAAAGCAGCGGTCCGGGCGCCACGGAGGGGCCCTCTGG GAAGAAAGCAGCGGTCCGGGCGTCACGGAGGGGCCCTCTGG < 41bp 0.768222374886392 0.513236736976208 0.5279668 0.5457918 prediction 0.509971275820368 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4491795 chr19:4491797 nonsynonymous SNV 0.430 2 23 hm5C_associated_SNPs_63707 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:4491797-4491798
64251 chr2 27320496 27320496 1 + G T LUSC 27320494 + 27320474 27320514 41 AGCCACGAGAGGAGCTCTTCCAGCTGTTTGGCTACGGAGAC AGCCACGAGAGGAGCTCTTCCATCTGTTTGGCTACGGAGAC < 41bp 0.75498160672722 0.408637776345652 0.45124966 0.25942427 prediction 0.50996321345444 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27320494 chr2:27320496 nonsynonymous SNV 0.870 2 23 hm5C_associated_SNPs_63709 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr2:27320485-27320511
64251 chr17 37667857 37667857 1 + A C BRCA 37667856 + 37667836 37667876 41 GCTAGGAGAGGAACGTTACACACCAGCCATAGATGTTTGGA GCTAGGAGAGGAACGTTACACCCCAGCCATAGATGTTTGGA < 41bp 0.757416606405918 0.502437302156564 0.15491071 0.04954198 prediction 0.509958608498708 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37667856 chr17:37667857 synonymous SNV . 0 22 hm5C_associated_SNPs_63710 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:37667834-37667859
64251 chr12 6647133 6647133 1 + C T LUAD 6647131 + 6647111 6647151 41 ACGCTGGGGCTGGCATTGCCCTCAACGACCACTTTGTCAAG ACGCTGGGGCTGGCATTGCCCTTAACGACCACTTTGTCAAG < 41bp 0.8077328991556 0.552768871602093 0.04043594 0.029714853 prediction 0.509928055107014 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647131 chr12:6647133 synonymous SNV . 0 23 hm5C_associated_SNPs_63715 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:6646999-6647137
64251 chr2 219679674 219679674 1 + G T CESC 219679671 + 219679651 219679691 41 GGTGGTCCTGGCCCCGGAGACGGGGGAGTTGAAGAGTGTGG GGTGGTCCTGGCCCCGGAGACGGTGGAGTTGAAGAGTGTGG < 41bp 0.916652852548902 0.661699872072942 0.9247284 0.46328786 prediction 0.50990596095192 Functional Loss - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679671 chr2:219679674 nonsynonymous SNV 0.027 1 24 hm5C_associated_SNPs_63718 0 0 4 DDX55 POSTAR2 ENCODE chr2:219679649-219679696
64251 chr3 10291033 10291033 1 + G T PAAD 10291031 + 10291011 10291051 41 GCGTCGCGTTCTGGAGGGCCCAGCAGCCCCAAGCGCCTGAA GCGTCGCGTTCTGGAGGGCCCATCAGCCCCAAGCGCCTGAA < 41bp 0.893149095011991 0.63819705819034 0.79676527 0.28419405 prediction 0.509904073643302 Functional Loss - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10291031 chr3:10291033 nonsynonymous SNV 0.340 1 23 hm5C_associated_SNPs_63719 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:10291004-10291034
64251 chr1 207263727 207263727 1 + G T GBM 207263724 + 207263704 207263744 41 AGGAGGTGGAAGGACAGATTCTGGGGACTTACGTTTGTATC AGGAGGTGGAAGGACAGATTCTGTGGACTTACGTTTGTATC < 41bp 0.914359764987789 0.659410760396928 0.899515 0.4331022 prediction 0.509898009181723 Functional Loss - C4BPB ENSG00000123843 CDS Human protein_coding chr1:207263724 chr1:207263727 nonsynonymous SNV 0.218 4 24 hm5C_associated_SNPs_63720 0 0 1 SND1 POSTAR2 ENCODE chr1:207263716-207263828
64251 chr8 107705019 107705019 1 + C T SKCM 107705017 + 107704997 107705037 41 TTTCACTGGTATTCGACCTGCACGAGTTGTATCTTCAACTT TTTCACTGGTATTCGACCTGCATGAGTTGTATCTTCAACTT < 41bp 0.782412531494577 0.527468453338427 0.06143099 0.20936033 prediction 0.5098881563123 Functional Loss - OXR1 ENSG00000164830 CDS Human protein_coding chr8:107705017 chr8:107705019 stopgain 0.859 1 23 hm5C_associated_SNPs_63723 0 0 2 GRWD1 POSTAR2 ENCODE chr8:107704955-107705060
64251 chr19 34890878 34890878 1 + C T CESC 34890876 + 34890856 34890896 41 GCAGTGCTCAAGTGACCTCTCACGACGCTTCTACCAATGGG GCAGTGCTCAAGTGACCTCTCATGACGCTTCTACCAATGGG < 41bp 0.773341077916728 0.518426381400129 0.031431973 0.08596137 prediction 0.509829393033197 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34890876 chr19:34890878 synonymous SNV . 0 23 hm5C_associated_SNPs_63730 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:34890800-34890880
64251 chr2 157406137 157406137 1 + C T BLCA 157406135 + 157406115 157406155 41 TGCAGGACAACATAACGATGCACGGATGAACCTTGCCATTG TGCAGGACAACATAACGATGCATGGATGAACCTTGCCATTG < 41bp 0.77143616519133 0.516522425722086 0.1262773 0.17628244 prediction 0.509827478938487 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157406135 chr2:157406137 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_63731 0 0 1 SF3B4 POSTAR2 ENCODE chr2:157406079-157406137
64251 chr12 64889308 64889308 1 + G C UCEC 64889307 + 64889287 64889327 41 GAAACCAGTCTTCAGGATATCGACAGCAGATTATCTCCAGG GAAACCAGTCTTCAGGATATCCACAGCAGATTATCTCCAGG < 41bp 0.833519146821316 0.578605847941736 0.34200403 0.13404045 prediction 0.50982659775916 Functional Loss - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64889307 chr12:64889308 nonsynonymous SNV 0.099 0 22 hm5C_associated_SNPs_63732 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:64889300-64889320
64251 chr20 47612370 47612370 1 + G T UCEC 47612367 + 47612347 47612387 41 AAAGACAGATGGCCAGCTTCCAAGAATCGGTTGGTGAGACC AAAGACAGATGGCCAGCTTCCAATAATCGGTTGGTGAGACC < 41bp 0.754909388171301 0.38240776906412 0.55947113 0.12237817 prediction 0.509818776342602 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47612367 chr20:47612370 stopgain 0.998 1 24 hm5C_associated_SNPs_63735 0 0 1 PPIG POSTAR2 ENCODE chr20:47612334-47612417
64251 chr20 47612371 47612371 1 + A C UCEC 47612367 + 47612347 47612387 41 AAAGACAGATGGCCAGCTTCCAAGAATCGGTTGGTGAGACC AAAGACAGATGGCCAGCTTCCAAGCATCGGTTGGTGAGACC < 41bp 0.754909388171301 0.34905811685596 0.55947113 0.4501803 prediction 0.509818776342602 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47612367 chr20:47612371 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_63736 0 0 1 PPIG POSTAR2 ENCODE chr20:47612334-47612417
64251 chr19 7986363 7986363 1 + A C STAD 7986359 + 7986339 7986379 41 GCGTAGCCCGGGAGGCCATTCAGAAAGTGCATCCGGGTGGC GCGTAGCCCGGGAGGCCATTCAGACAGTGCATCCGGGTGGC < 41bp 0.920089315881648 0.665180241062133 0.7852731 0.30183804 prediction 0.509818149639029 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7986359 chr19:7986363 nonsynonymous SNV 0.009 0 25 hm5C_associated_SNPs_63737 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:7986359-7986385
64251 chr3 130698210 130698210 1 + G T UCEC 130698207 + 130698187 130698227 41 TGTTACAACACTCATTGCCTCAGGAGTATCAATAAAAATGA TGTTACAACACTCATTGCCTCAGTAGTATCAATAAAAATGA < 41bp 0.754901734273193 0.403871364779993 0.7988234 0.071787566 prediction 0.509803468546385 Functional Loss - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130698207 chr3:130698210 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_63740 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:130698208-130698257
64251 chr19 16620383 16620383 1 + C T UCEC 16620381 + 16620361 16620401 41 GCGTCCACTGGGCAGGATGCCCCGAGGCAGGCCCAGGCGAG GCGTCCACTGGGCAGGATGCCCTGAGGCAGGCCCAGGCGAG < 41bp 0.754886624751514 0.496610816679962 0.30381465 0.21936941 prediction 0.509773249503028 Functional Loss - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16620381 chr19:16620383 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_63744 0 0 2 EIF3H POSTAR2 ENCODE chr19:16620311-16620428
64251 chr8 90937464 90937464 1 + G T ESCA 90937462 + 90937442 90937482 41 GAAGAAAATATTTAAGCTGTCTGCAGCAGTAGTATTGATAG GAAGAAAATATTTAAGCTGTCTTCAGCAGTAGTATTGATAG < 41bp 0.754878133858201 0.443051275308374 0.02180627 0.02476114 prediction 0.509756267716402 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937462 chr8:90937464 nonsynonymous SNV 0.897 1 23 hm5C_associated_SNPs_63747 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr8:90937439-90937464
64251 chr19 50000835 50000835 1 + G C LUSC 50000834 + 50000814 50000854 41 TCACTGGTAATGTGTCCATTCGAGGGCGGATCCTCTCTGGT TCACTGGTAATGTGTCCATTCCAGGGCGGATCCTCTCTGGT < 41bp 0.862764874759248 0.607887864834422 0.9395223 0.9136267 prediction 0.509754019849652 Functional Loss - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50000834 chr19:50000835 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_63748 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50000794-50000855
64251 chr1 40881966 40881966 1 + C T SKCM 40881964 + 40881944 40881984 41 AAGAAACAGCTCTCTAAAGACTCCATTCTTTCACTGTATGG AAGAAACAGCTCTCTAAAGACTTCATTCTTTCACTGTATGG < 41bp 0.754874670829291 0.455848340253591 0.9522227 0.09466514 prediction 0.509749341658582 Functional Loss - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40881964 chr1:40881966 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63752 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:40881962-40881983
64251 chr19 19153613 19153613 1 + C T UCEC 19153611 + 19153591 19153631 41 AGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTT AGACCTTTGATGCAGCTGTGCGTGAGAACATCGAGGAGTTT < 41bp 0.784883077280564 0.530012050064606 0.087685674 0.05987948 prediction 0.509742054431916 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19153611 chr19:19153613 synonymous SNV . 0 23 hm5C_associated_SNPs_63754 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:19153580-19153619
64251 chr3 42234641 42234641 1 + G T BLCA 42234638 + 42234618 42234658 41 CGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCTG CGGAAGATGCTGCCCGCCAGCAATAGGAGATCACACACCTG < 41bp 0.754868053934995 0.379688492771727 0.8915061 0.53657085 prediction 0.509736107869991 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42234638 chr3:42234641 stopgain 0.994 1 24 hm5C_associated_SNPs_63755 0 0 5 BUD13 POSTAR2 ENCODE chr3:42234588-42234700
64251 chr2 196581704 196581704 1 + C T UCEC 196581702 + 196581682 196581722 41 TGATCATGGGGGATGGCATCCACAACTTCAGTGATGGGCTC TGATCATGGGGGATGGCATCCATAACTTCAGTGATGGGCTC < 41bp 0.754864849294861 0.473381206565542 0.11738488 0.07242912 prediction 0.509729698589722 Functional Loss - SLC39A10 ENSG00000196950 CDS Human protein_coding chr2:196581702 chr2:196581704 synonymous SNV . 0 23 hm5C_associated_SNPs_63758 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:196581683-196581704
64251 chr1 27676231 27676231 1 + C T CESC 27676229 + 27676209 27676249 41 CGCATGCTCAGCAGCAGCTCCTCGGTGTCCAGCCTTAACTC CGCATGCTCAGCAGCAGCTCCTTGGTGTCCAGCCTTAACTC < 41bp 0.754859949727516 0.498596939069102 0.096407175 0.05796507 prediction 0.509719899455031 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27676229 chr1:27676231 nonsynonymous SNV 0.975 2 23 hm5C_associated_SNPs_63761 0 0 1 GRWD1 POSTAR2 ENCODE chr1:27676137-27676255
64251 chr2 73441463 73441463 1 + G T LUAD 73441460 + 73441440 73441480 41 GCGGGCCGCGCGCGGGTCTCCGTGGAAGTCCGTTTCGTGAG GCGGGCCGCGCGCGGGTCTCCGTTGAAGTCCGTTTCGTGAG < 41bp 0.906298902496677 0.651439076723813 0.74605596 0.30849752 prediction 0.509719651545729 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73441460 chr2:73441463 synonymous SNV . 0 24 hm5C_associated_SNPs_63762 0 0 5 DDX3X POSTAR2 ENCODE chr2:73441407-73441489
64251 chr22 44379823 44379823 1 + G T THYM 44379820 + 44379800 44379840 41 TGTTTTGTCCTAGGTTTTACCTTGGGGGACCCACAAGCATC TGTTTTGTCCTAGGTTTTACCTTTGGGGACCCACAAGCATC < 41bp 0.754852147474557 0.353571024060003 0.34467572 0.094827294 prediction 0.509704294949115 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379820 chr22:44379823 nonsynonymous SNV 0.024 4 24 hm5C_associated_SNPs_63766 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr10 114173031 114173031 1 + C T rs374513448 114173029 + 114173009 114173049 41 TTGAAGCCCACATTGTTTCCCGCGGTGCCTCGACTCCTTAA TTGAAGCCCACATTGTTTCCCGTGGTGCCTCGACTCCTTAA < 41bp 0.790209733558849 0.535361732375045 0.52763623 0.49161103 prediction 0.509696002367609 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114173029 chr10:114173031 nonsynonymous SNV 0.087 0 23 hm5C_associated_SNPs_63769 0 0 2 PPIG POSTAR2 ENCODE chr10:114173013-114173065
64251 chr4 17625401 17625401 1 + G T LIHC 17625399 + 17625379 17625419 41 GCAGGCATCTGCCAACATCCCTGCACCTCTGAAGCCAACGT GCAGGCATCTGCCAACATCCCTTCACCTCTGAAGCCAACGT < 41bp 0.864875770231235 0.610035015481927 0.16863558 0.097664446 prediction 0.509681509498615 Functional Loss - MED28 ENSG00000118579 CDS Human protein_coding chr4:17625399 chr4:17625401 nonsynonymous SNV 0.723 4 23 hm5C_associated_SNPs_63772 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:17625353-17625638
64251 chr17 1629280 1629280 1 + G T CESC 1629277 + 1629257 1629297 41 AACCTGGGCAACCCACTGGCCAGGAGGAACTTCGGAGCCTC AACCTGGGCAACCCACTGGCCAGTAGGAACTTCGGAGCCTC < 41bp 0.754815045853649 0.368916082201464 0.8046801 0.17651954 prediction 0.509630091707299 Functional Loss - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1629277 chr17:1629280 stopgain 0.485 0 24 hm5C_associated_SNPs_63778 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:1629264-1629290
64251 chr1 200017899 200017899 1 + T C SKCM 200017898 + 200017878 200017918 41 ATGGCAGATCAAACTCTCTTCTCCATTGTCGAGTGGGCCAG ATGGCAGATCAAACTCTCTTCCCCATTGTCGAGTGGGCCAG < 41bp 0.754808317604771 0.487592939877686 0.95140594 0.05412358 prediction 0.509616635209543 Functional Loss - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200017898 chr1:200017899 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_63780 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:200017877-200017943
64251 chr7 5959545 5959545 1 + G T COAD 5959543 + 5959523 5959563 41 CATCGTTGGGCCCCAGCTCACAGTGCTGGCCTCTGACATCT CATCGTTGGGCCCCAGCTCACATTGCTGGCCTCTGACATCT < 41bp 0.754806739218222 0.41276807742268 0.5555525 0.18415883 prediction 0.509613478436443 Functional Loss - CCZ1 ENSG00000122674 CDS Human protein_coding chr7:5959543 chr7:5959545 nonsynonymous SNV 0.954 1 23 hm5C_associated_SNPs_63781 0 0 1 YBX3 POSTAR2 ENCODE chr7:5959540-5959598
64251 chr19 19153573 19153573 1 + C T HNSC 19153571 + 19153551 19153591 41 TCAACACAGGCGAAGATGGTCTCCAAGCGCATTGCCCAGGA TCAACACAGGCGAAGATGGTCTTCAAGCGCATTGCCCAGGA < 41bp 0.816260404272491 0.561458136271398 0.96423995 0.90466833 prediction 0.509604536002187 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19153571 chr19:19153573 nonsynonymous SNV 0.279 1 23 hm5C_associated_SNPs_63783 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19153555-19153577
64251 chr2 74685760 74685760 1 + G C CESC 74685759 + 74685739 74685779 41 GCCAGCAGCGGGAACGGCAGCGAGGAGGCCTGGGGGGCACT GCCAGCAGCGGGAACGGCAGCCAGGAGGCCTGGGGGGCACT < 41bp 0.754787665329314 0.439812690674403 0.91769075 0.9183172 prediction 0.509575330658628 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74685759 chr2:74685760 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_63787 0 0 7 AARS POSTAR2 ENCODE chr2:74685735-74685792
64251 chr14 77787681 77787681 1 + G C rs77759067 77787677 + 77787657 77787697 41 GCACGCTCTGCGCCTGCGTGCTGCGCGCTGCCCGCTGGGGC GCACGCTCTGCGCCTGCGTGCTGCCCGCTGCCCGCTGGGGC < 41bp 0.754757373042926 0.466308784451666 0.17850393 0.08463323 prediction 0.509514746085852 Functional Loss - GSTZ1 ENSG00000100577 intronic Human protein_coding chr14:77787677 chr14:77787681 . . 0 25 hm5C_associated_SNPs_63797 0 0 1 XPO5 POSTAR2 ENCODE chr14:77787638-77787704
64251 chr6 16274664 16274664 1 + G T UCEC 16274662 + 16274642 16274682 41 TCAGGCAGGGAACGTGGTGACAGGAGAAATGGTAGAAGAGC TCAGGCAGGGAACGTGGTGACATGAGAAATGGTAGAAGAGC < 41bp 0.882335109748219 0.627582478894124 0.6961403 0.25618666 prediction 0.509505261708191 Functional Loss - GMPR ENSG00000137198 CDS Human protein_coding chr6:16274662 chr6:16274664 stopgain 0.994 1 23 hm5C_associated_SNPs_63798 0 0 3 SF3B1 POSTAR2 ENCODE chr6:16274645-16274672
64251 chr11 57457860 57457860 1 + C T UCEC 57457858 + 57457838 57457878 41 TTCATCCCTGTAGCTGGCCTCACGGGATTTCACGTGGTTCT TTCATCCCTGTAGCTGGCCTCATGGGATTTCACGTGGTTCT < 41bp 0.754751185090928 0.481527879443265 0.66469073 0.7345254 prediction 0.509502370181856 Functional Loss - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57457858 chr11:57457860 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_63799 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:57457847-57457871
64251 chrX 46913989 46913989 1 + C T STAD 46913987 + 46913967 46914007 41 AAAAGAGGAAAGCATTCACACTCGAATGAGAATGTTTATGC AAAAGAGGAAAGCATTCACACTTGAATGAGAATGTTTATGC < 41bp 0.831082587602895 0.576352595603605 0.32782185 0.100302756 prediction 0.509459983998579 Functional Loss - JADE3 ENSG00000102221 CDS Human protein_coding chrX:46913987 chrX:46913989 stopgain 0.998 1 23 hm5C_associated_SNPs_63805 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chrX:46913974-46913990
64251 chr16 19693604 19693604 1 + G T STAD 19693601 + 19693581 19693621 41 GAGAGCTTCTCAACGTGATCCAGGACTACACCTGGGAGGAC GAGAGCTTCTCAACGTGATCCAGTACTACACCTGGGAGGAC < 41bp 0.754716333326485 0.371358824302211 0.7737127 0.3394282 prediction 0.509432666652971 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19693601 chr16:19693604 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_63807 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:19693579-19693607
64251 chr3 10091106 10091106 1 + G T ESCA 10091104 + 10091084 10091124 41 TATCTGCAGTGGGAATGAAGCTGAAGTTGATACTGCCTTAG TATCTGCAGTGGGAATGAAGCTTAAGTTGATACTGCCTTAG < 41bp 0.75471459776801 0.428876921663392 0.15856656 0.031837374 prediction 0.50942919553602 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10091104 chr3:10091106 stopgain 0.991 1 23 hm5C_associated_SNPs_63808 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:10091058-10091106
64251 chr19 46173962 46173962 1 + G T OV 46173959 + 46173939 46173979 41 AACGGTACCGCAGGGAGTGCCAGGAGACCTTGGCAGCCGCG AACGGTACCGCAGGGAGTGCCAGTAGACCTTGGCAGCCGCG < 41bp 0.918694757412633 0.663982801728592 0.9017732 0.37917924 prediction 0.509423911368082 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46173959 chr19:46173962 stopgain 0.762 0 24 hm5C_associated_SNPs_63809 0 0 2 DDX24 POSTAR2 ENCODE chr19:46173882-46173964
64251 chr18 72178077 72178077 1 + C T UCEC 72178075 + 72178055 72178095 41 CTGTCAACGTCCGATTCTGCCTCGAAGGCATGGAGGAGTCA CTGTCAACGTCCGATTCTGCCTTGAAGGCATGGAGGAGTCA < 41bp 0.754703266005169 0.454991065749773 0.86414874 0.083560854 prediction 0.509406532010339 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72178075 chr18:72178077 synonymous SNV . 0 23 hm5C_associated_SNPs_63812 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:72178077-72178112
64251 chr7 140380909 140380909 1 + G C HNSC 140380908 + 140380888 140380928 41 ACTTGAAAAGGAAGATTGCACGGCTGGGGATCAACATGCTC ACTTGAAAAGGAAGATTGCACCGCTGGGGATCAACATGCTC < 41bp 0.754696271275037 0.440515661270816 0.08803439 0.022794902 prediction 0.509392542550073 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140380908 chr7:140380909 nonsynonymous SNV 0.352 0 22 hm5C_associated_SNPs_63815 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:140380885-140380916
64251 chr3 9984547 9984547 1 + T C HNSC 9984546 + 9984526 9984566 41 AACTGTGGAGCTGACCAATTCTGCGTGAACACTGAGGGCTC AACTGTGGAGCTGACCAATTCCGCGTGAACACTGAGGGCTC < 41bp 0.760246437274962 0.505566696167013 0.50379044 0.64090043 prediction 0.509359482215899 Functional Loss - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9984546 chr3:9984547 nonsynonymous SNV 0.991 5 22 hm5C_associated_SNPs_63820 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr3:9984542-9984565
64251 chr14 77576230 77576230 1 + G T UCEC 77576228 + 77576208 77576248 41 CTGAGCGCCTTAGGCTGGAGCAGAGAAGACAGGCCGAGGCA CTGAGCGCCTTAGGCTGGAGCATAGAAGACAGGCCGAGGCA < 41bp 0.754679367144305 0.40179358954049 0.8771739 0.49016425 prediction 0.509358734288609 Functional Loss - CIPC ENSG00000198894 CDS Human protein_coding chr14:77576228 chr14:77576230 nonsynonymous SNV 0.942 0 23 hm5C_associated_SNPs_63821 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:77576197-77576235
64251 chr9 135906405 135906405 1 + G T SARC 135906403 + 135906383 135906423 41 TGCCAGACGCACAGGGATGGCGGCGGAGGCGGCCGATTTGG TGCCAGACGCACAGGGATGGCGTCGGAGGCGGCCGATTTGG < 41bp 0.881712580502046 0.62703657334419 0.91126525 0.8764027 prediction 0.509352014315712 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906403 chr9:135906405 nonsynonymous SNV 0.529 1 23 hm5C_associated_SNPs_63824 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:135906400-135906420
64251 chr5 132440078 132440078 1 + G T SARC 132440076 + 132440056 132440096 41 TGCTGAGCAGGGTACAGACACAGCTGTGCCTTCGGATTCAG TGCTGAGCAGGGTACAGACACATCTGTGCCTTCGGATTCAG < 41bp 0.754674933980661 0.448642207804092 0.55121416 0.14396986 prediction 0.509349867961322 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132440076 chr5:132440078 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_63825 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:132440003-132440086
64251 chr9 96289498 96289498 1 + C T COAD 96289496 + 96289476 96289516 41 AAGCCACTCAGAGCCTCAGGCACGAGGAGACCCAGGAGACC AAGCCACTCAGAGCCTCAGGCATGAGGAGACCCAGGAGACC < 41bp 0.81350725945936 0.558842630341753 0.5622616 0.82090247 prediction 0.509329258235215 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96289496 chr9:96289498 stopgain 1.000 0 23 hm5C_associated_SNPs_63827 0 0 5 DDX24 POSTAR2 ENCODE chr9:96289436-96289516
64251 chr9 128103496 128103496 1 + G T UCEC 128103494 + 128103474 128103514 41 AGCGATGATGAGAAATCAGACAGGAACAGACCTTGGTGGAG AGCGATGATGAGAAATCAGACATGAACAGACCTTGGTGGAG < 41bp 0.754660327620051 0.432022131638747 0.38482243 0.07601765 prediction 0.509320655240102 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128103494 chr9:128103496 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63828 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:128103451-128103519
64251 chr15 64687693 64687693 1 + C T UCEC 64687691 + 64687671 64687711 41 CCTGCATTTACTGAACCTGACACGACTGCAGAGGTTAAAAC CCTGCATTTACTGAACCTGACATGACTGCAGAGGTTAAAAC < 41bp 0.803187176853527 0.548528239759249 0.10273495 0.24174687 prediction 0.509317874188555 Functional Loss - TRIP4 ENSG00000103671 CDS Human protein_coding chr15:64687691 chr15:64687693 nonsynonymous SNV 0.162 0 23 hm5C_associated_SNPs_63829 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:64687674-64687694
64251 chr12 123889576 123889576 1 + C T UCEC 123889574 + 123889554 123889594 41 CTGTACGCACAGGACCCTTCCACGGGCTGCTACATGTACTA CTGTACGCACAGGACCCTTCCATGGGCTGCTACATGTACTA < 41bp 0.80512691340033 0.550469121335413 0.6975206 0.8153125 prediction 0.509315584129835 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123889574 chr12:123889576 nonsynonymous SNV 0.880 3 23 hm5C_associated_SNPs_63830 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:123889539-123889576
64251 chr4 160253698 160253698 1 + T C LIHC 160253697 + 160253677 160253717 41 ATTAAAAAGGCCAGTCGCTACTCCATTCCAGATCTTGCTGT ATTAAAAAGGCCAGTCGCTACCCCATTCCAGATCTTGCTGT < 41bp 0.754655965157988 0.48848887740204 0.96099675 0.31624228 prediction 0.509311930315976 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160253697 chr4:160253698 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_63831 0 0 5 FUS POSTAR2 GSE40653,GSM998875 chr4:160253680-160253700
64251 chr13 88328648 88328648 1 + C T SKCM 88328646 + 88328626 88328666 41 TGAAGCCCCCTAAGGGGACTCGCCAACCCAACAAGCCCAGG TGAAGCCCCCTAAGGGGACTCGTCAACCCAACAAGCCCAGG < 41bp 0.754651087578294 0.481860262620098 0.3660343 0.23612535 prediction 0.509302175156588 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328646 chr13:88328648 synonymous SNV . 0 23 hm5C_associated_SNPs_63833 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88328620-88328660
64251 chr1 148932825 148932825 1 + A T LUSC 148932821 + 148932801 148932841 41 CCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTGCCCAGCAT CCCAAGCTAGCCCGCCAGGCCTCCTTAGAGCTGCCCAGCAT < 41bp 0.873169819173872 0.61852168784611 0.9577625 0.046655357 prediction 0.509296262655523 Functional Loss - LOC645166 ENSG00000232527 ncRNA_exonic Human lincRNA chr1:148932821 chr1:148932825 . . 0 25 hm5C_associated_SNPs_63835 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:148932805-148932854
64251 chr14 53237817 53237817 1 + A C UCEC 53237813 + 53237793 53237833 41 CCATGCAAGTGGCGACTGCACAGAATGGCTGACTTGAAGAG CCATGCAAGTGGCGACTGCACAGACTGGCTGACTTGAAGAG < 41bp 0.754622338721011 0.362219391864815 0.107316226 0.06394735 prediction 0.509244677442022 Functional Loss - STYX ENSG00000198252 CDS Human protein_coding chr14:53237813 chr14:53237817 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_63839 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:53237768-53237828
64251 chr7 155532557 155532557 1 + A C KIRP 155532553 + 155532533 155532573 41 CCCCACCCCAGCACCCACCACAGCACCCGCCGCAGCACCAG CCCCACCCCAGCACCCACCACAGCCCCCGCCGCAGCACCAG < 41bp 0.754610555810775 0.343970474041094 0.116699606 0.20471835 prediction 0.509221111621549 Functional Loss - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155532553 chr7:155532557 nonsynonymous SNV 0.050 2 25 hm5C_associated_SNPs_63843 0 0 2 DDX59 POSTAR2 ENCODE chr7:155532543-155532673
64251 chr22 18566320 18566320 1 + C T COAD 18566318 + 18566298 18566338 41 ATGGAGCCTTGGCAGAATTTCACGTGCAGCGGGTGCTGCTG ATGGAGCCTTGGCAGAATTTCATGTGCAGCGGGTGCTGCTG < 41bp 0.782822704651252 0.528220665099304 0.4004763 0.29640996 prediction 0.509204079103896 Functional Loss - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18566318 chr22:18566320 synonymous SNV . 0 23 hm5C_associated_SNPs_63844 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:18566270-18566330
64251 chrX 129147526 129147526 1 + C T LAML 129147524 + 129147504 129147544 41 AGCACCTGTCCCGGCTCTGGCTCCAGCGCCACCGTCAGTGC AGCACCTGTCCCGGCTCTGGCTTCAGCGCCACCGTCAGTGC < 41bp 0.754601725490089 0.490888086604878 0.92427015 0.2855008 prediction 0.509203450980177 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147524 chrX:129147526 nonsynonymous SNV 0.018 0 23 hm5C_associated_SNPs_63846 0 0 8 DDX59 POSTAR2 ENCODE chrX:129147486-129147543
64251 chr4 128703506 128703506 1 + G C rs565583286 128703505 + 128703485 128703525 41 AAGACCCAGGCTGCGGGACGCGGTGCAGGCTGCGGCGCTGA AAGACCCAGGCTGCGGGACGCCGTGCAGGCTGCGGCGCTGA < 41bp 0.826255761416005 0.571657079919883 0.7934801 0.404734 prediction 0.509197362992244 Functional Loss - HSPA4L ENSG00000164070 UTR5 Human protein_coding chr4:128703505 chr4:128703506 . . 0 22 hm5C_associated_SNPs_63848 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:128703483-128703521
64251 chr14 39646650 39646650 1 + C T CESC 39646648 + 39646628 39646668 41 GCGTCGGACCAGAAGAGAATCACGCCAGGAAAGCGACCCGG GCGTCGGACCAGAAGAGAATCATGCCAGGAAAGCGACCCGG < 41bp 0.783281711641193 0.528702166718638 0.25266355 0.42419717 prediction 0.50915908984511 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39646648 chr14:39646650 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63853 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39646613-39646680
64251 chr4 3424270 3424270 1 + G T UCEC 3424267 + 3424247 3424287 41 CATGGCATCAACGGGGCGGCCGCGGACCTCTTCCTGGTGGG CATGGCATCAACGGGGCGGCCGCTGACCTCTTCCTGGTGGG < 41bp 0.754550406479708 0.385878394109203 0.8520906 0.19502616 prediction 0.509100812959417 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3424267 chr4:3424270 synonymous SNV . 0 24 hm5C_associated_SNPs_63857 0 0 1 PPIG POSTAR2 ENCODE chr4:3424260-3424299
64251 chr9 133760430 133760430 1 + C T COAD 133760428 + 133760408 133760448 41 GGAGGAAAGCCCTCGCAGAGCCCGAGCCAGGAGGCGGCCGG GGAGGAAAGCCCTCGCAGAGCCTGAGCCAGGAGGCGGCCGG < 41bp 0.759268836070552 0.504722644199186 0.23925501 0.29295114 prediction 0.509092383742731 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760428 chr9:133760430 nonsynonymous SNV 0.897 0 23 hm5C_associated_SNPs_63859 0 0 2 SLTM POSTAR2 ENCODE chr9:133760423-133760470
64251 chr9 137982073 137982073 1 + G T LUSC 137982071 + 137982051 137982091 41 CCAACCCTGAGGAGAGCTGGCAGGTGTACAGCTCTGCCCAG CCAACCCTGAGGAGAGCTGGCATGTGTACAGCTCTGCCCAG < 41bp 0.89302456341485 0.638480270383182 0.9184908 0.4155784 prediction 0.509088586063336 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:137982071 chr9:137982073 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63860 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:137982049-137982073
64251 chr12 52450425 52450425 1 + C T UCEC 52450423 + 52450403 52450443 41 AGCACTGCCAAACTGGACTACTCCAAGGTGAGGTCCCACCC AGCACTGCCAAACTGGACTACTTCAAGGTGAGGTCCCACCC < 41bp 0.754542190722021 0.463600893050741 0.95905393 0.77687705 prediction 0.509084381444041 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52450423 chr12:52450425 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_63861 0 0 1 PRPF8 POSTAR2 ENCODE chr12:52450418-52450473
64251 chr1 33236936 33236936 1 + A T UCEC 33236932 + 33236912 33236952 41 AGACAACCTTGACTCCACTGCAGGAGTCTCCTGTCATCTCC AGACAACCTTGACTCCACTGCAGGTGTCTCCTGTCATCTCC < 41bp 0.840144560969931 0.585607241040807 0.9182369 0.79627746 prediction 0.509074639858247 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33236932 chr1:33236936 nonsynonymous SNV 0.046 1 25 hm5C_associated_SNPs_63863 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:33236920-33236940
64251 chr6 36454819 36454819 1 + C T GBM 36454817 + 36454797 36454837 41 TGTGTTCGAAGCAAATCCCTCACGAATCTGGTAGCTGCTGG TGTGTTCGAAGCAAATCCCTCATGAATCTGGTAGCTGCTGG < 41bp 0.787105430037925 0.532568358245239 0.06320077 0.23629364 prediction 0.509074143585372 Functional Loss - KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36454817 chr6:36454819 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_63865 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:36454788-36454820
64251 chr17 80011925 80011925 1 + G T UCEC 80011923 + 80011903 80011943 41 CGCAAGCTCTCAGAGGCCACCAGGTGAGGCCAGGGGCTTGG CGCAAGCTCTCAGAGGCCACCATGTGAGGCCAGGGGCTTGG < 41bp 0.754533505188305 0.400256131055486 0.9194449 0.3314251 prediction 0.50906701037661 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80011923 chr17:80011925 nonsynonymous SNV 0.894 1 23 hm5C_associated_SNPs_63867 0 0 1 RPS3 POSTAR2 ENCODE chr17:80011903-80011926
64251 chr16 88871286 88871286 1 + G T CESC 88871283 + 88871263 88871303 41 GAGTCCTGCACCCCAGAGGCCGAGGGCCGCCCTGAGGAGCC GAGTCCTGCACCCCAGAGGCCGATGGCCGCCCTGAGGAGCC < 41bp 0.754531744271479 0.365348310146492 0.8672185 0.27823472 prediction 0.509063488542957 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88871283 chr16:88871286 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_63868 0 0 3 BUD13 POSTAR2 ENCODE chr16:88871244-88871313
64251 chr19 39423186 39423186 1 + G T SARC 39423183 + 39423163 39423203 41 CTGTCGAGTGCGGCTCAGCACTGGCCGCGAGGCCGTCTGCT CTGTCGAGTGCGGCTCAGCACTGTCCGCGAGGCCGTCTGCT < 41bp 0.754521119789031 0.361731848943508 0.2711667 0.18206742 prediction 0.509042239578062 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423183 chr19:39423186 nonsynonymous SNV 0.665 4 24 hm5C_associated_SNPs_63874 0 0 4 DDX55 POSTAR2 ENCODE chr19:39423142-39423282
64251 chr14 59113795 59113795 1 + C T SKCM 59113793 + 59113773 59113813 41 AAATTAAGGCCTCACATAACCTCAAGAAGAAGATCCTCCGC AAATTAAGGCCTCACATAACCTTAAGAAGAAGATCCTCCGC < 41bp 0.793575209344749 0.53905506329566 0.16478884 0.17433146 prediction 0.509040292098176 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113793 chr14:59113795 synonymous SNV . 0 23 hm5C_associated_SNPs_63875 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59113776-59113828
64251 chr2 27121530 27121530 1 + G T STAD 27121528 + 27121508 27121548 41 GGCCAAGGTGATTGATGCCACAGGAAAACTGGTGATCCCTG GGCCAAGGTGATTGATGCCACATGAAAACTGGTGATCCCTG < 41bp 0.885608513170598 0.631094252995789 0.54880995 0.32239562 prediction 0.509028520349619 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27121528 chr2:27121530 stopgain 0.928 1 23 hm5C_associated_SNPs_63876 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27121517-27121538
64251 chr1 1459272 1459272 1 + G T UCEC 1459269 + 1459249 1459289 41 GCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTA GCCATAGCAACAAGGAACACCAATAAGAACCGCAGCCTGTA < 41bp 0.754512919639848 0.361537075218337 0.3403659 0.34375045 prediction 0.509025839279696 Functional Loss - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1459269 chr1:1459272 nonsynonymous SNV 0.018 1 24 hm5C_associated_SNPs_63877 0 0 10 NOP58 POSTAR2 GSE43666,GSM1067861 chr1:1459241-1459279
64251 chr8 21832234 21832234 1 + C T READ 21832232 + 21832212 21832252 41 GAAAAATAGCCTCTTCTTTTCGCGATTCATCATTATTTGAT GAAAAATAGCCTCTTCTTTTCGTGATTCATCATTATTTGAT < 41bp 0.754506803525664 0.471807729287386 0.3055512 0.30856526 prediction 0.509013607051328 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21832232 chr8:21832234 synonymous SNV . 0 23 hm5C_associated_SNPs_63879 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr8:21832220-21832279
64251 chr3 183490196 183490196 1 + C T PRAD 183490194 + 183490174 183490214 41 GCCAAGGCCAGCTCTTCTGTCTCCAAAGCAGTTGGGCCAAA GCCAAGGCCAGCTCTTCTGTCTTCAAAGCAGTTGGGCCAAA < 41bp 0.75448780697459 0.449943564553138 0.96334386 0.88934815 prediction 0.508975613949179 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183490194 chr3:183490196 nonsynonymous SNV 0.980 1 23 hm5C_associated_SNPs_63884 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:183490192-183490215
64251 chr8 19701662 19701662 1 + C T UCEC 19701660 + 19701640 19701680 41 GTTGCTTCAGCAAGAGTGGCCACGGGGCGAGAATCTTTTCC GTTGCTTCAGCAAGAGTGGCCATGGGGCGAGAATCTTTTCC < 41bp 0.754476486480915 0.489523014494454 0.48637196 0.39359942 prediction 0.50895297296183 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19701660 chr8:19701662 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_63887 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:19701658-19701682
64251 chr1 166818294 166818294 1 + G C LUAD 166818290 + 166818270 166818310 41 CTCCGTCTGCCTCGGGATATCACAGAGCTGCCCGAGTGGAG CTCCGTCTGCCTCGGGATATCACACAGCTGCCCGAGTGGAG < 41bp 0.75447481173843 0.466011139976116 0.8461321 0.28584814 prediction 0.50894962347686 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818290 chr1:166818294 nonsynonymous SNV 0.894 0 25 hm5C_associated_SNPs_63888 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:166818280-166818300
64251 chr17 41006560 41006560 1 + C T BRCA 41006558 + 41006538 41006578 41 GCTGCAGAGGCTGCAGGTGACCCGGAAGCTGCTGGAGATGG GCTGCAGAGGCTGCAGGTGACCTGGAAGCTGCTGGAGATGG < 41bp 0.754458621601437 0.497732786451851 0.36787066 0.36995092 prediction 0.508917243202873 Functional Loss - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006558 chr17:41006560 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_63894 0 0 3 PPIG POSTAR2 ENCODE chr17:41006505-41006620
64251 chr4 154237038 154237038 1 + C T LUSC 154237036 + 154237016 154237056 41 TTTTGGCATACGGGGACGCTCTCCGGGGCAGCTGCAGCGGC TTTTGGCATACGGGGACGCTCTTCGGGGCAGCTGCAGCGGC < 41bp 0.817454676856908 0.563012343448858 0.59054583 0.5125489 prediction 0.508884666816099 Functional Loss - TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154237036 chr4:154237038 nonsynonymous SNV 0.184 3 23 hm5C_associated_SNPs_63897 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:154237021-154237049
64251 chr12 2929267 2929267 1 + G C LUSC 2929266 + 2929246 2929286 41 CCACAGATGGAGATGGGTGTCGTGAGCTGGTGGTGGGCTAC CCACAGATGGAGATGGGTGTCCTGAGCTGGTGGTGGGCTAC < 41bp 0.857939305547085 0.603506122459356 0.467168 0.288263 prediction 0.508866366175458 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2929266 chr12:2929267 nonsynonymous SNV 0.684 1 22 hm5C_associated_SNPs_63901 0 0 6 BUD13 POSTAR2 ENCODE chr12:2929220-2929306
64251 chr5 10261724 10261724 1 + C T BRCA 10261722 + 10261702 10261742 41 GTCCCCAGGTTCTCAGAGCTCACAGCCGAGAAGCTGGGCTT GTCCCCAGGTTCTCAGAGCTCATAGCCGAGAAGCTGGGCTT < 41bp 0.803884007216547 0.549469355461208 0.72443944 0.7995694 prediction 0.508829303510676 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10261722 chr5:10261724 nonsynonymous SNV 0.873 2 23 hm5C_associated_SNPs_63904 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:10261675-10261758
64251 chr16 777537 777537 1 + G C LUAD 777536 + 777516 777556 41 GTCAAGGTCATCCCCGTGCTCGAGGACAACTACATGTACCT GTCAAGGTCATCCCCGTGCTCCAGGACAACTACATGTACCT < 41bp 0.754409902887796 0.448466820045808 0.8766507 0.1878924 prediction 0.508819805775591 Functional Loss - HAGHL ENSG00000103253 CDS Human protein_coding chr16:777536 chr16:777537 nonsynonymous SNV 0.985 2 22 hm5C_associated_SNPs_63905 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:777519-777537
64251 chr5 149361976 149361976 1 + G T rs143723255 149361973 + 149361953 149361993 41 TCTCATCAGAAGTCTAATACCTGGGCAGGTTTATAACATCC TCTCATCAGAAGTCTAATACCTGTGCAGGTTTATAACATCC < 41bp 0.754379764812848 0.395084209208229 0.12166822 0.032420903 prediction 0.508759529625695 Functional Loss - SLC26A2 ENSG00000155850 UTR3 Human protein_coding chr5:149361973 chr5:149361976 . . 0 24 hm5C_associated_SNPs_63912 5 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:149361964-149361981
64251 chr19 58152126 58152126 1 + G T LIHC 58152123 + 58152103 58152143 41 ACCTTCTGAACAGAGAATTTCTGGAGAAAGAGTGCCACAGT ACCTTCTGAACAGAGAATTTCTGTAGAAAGAGTGCCACAGT < 41bp 0.899404342924545 0.645025293670059 0.69673806 0.15914431 prediction 0.508758098508972 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58152123 chr19:58152126 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_63913 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58152120-58152136
64251 chr3 49569061 49569061 1 + C T SKCM 49569059 + 49569039 49569079 41 ACCCACGGTCACCATCCGGACTCGAGGCGCCATTATTCAAA ACCCACGGTCACCATCCGGACTTGAGGCGCCATTATTCAAA < 41bp 0.789416404716901 0.535053206918243 0.5693228 0.12696815 prediction 0.508726395597316 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569059 chr3:49569061 stopgain 0.997 1 23 hm5C_associated_SNPs_63920 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49569028-49569117
64251 chr2 220098090 220098090 1 + C T COAD 220098088 + 220098068 220098108 41 AGCCCAGGGGCTTCGGGATGCCCGAGGTGGGCCATCACACT AGCCCAGGGGCTTCGGGATGCCTGAGGTGGGCCATCACACT < 41bp 0.79230358541191 0.537952600955907 0.7670964 0.8083192 prediction 0.508701968912007 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098088 chr2:220098090 stopgain 0.646 1 23 hm5C_associated_SNPs_63924 0 0 5 GRWD1 POSTAR2 ENCODE chr2:220098070-220098097
64251 chr10 89692895 89692895 1 + G T LUSC 89692893 + 89692873 89692913 41 TGCAGCAATTCACTGTAAAGCTGGAAAGGGACGAACTGGTG TGCAGCAATTCACTGTAAAGCTTGAAAGGGACGAACTGGTG < 41bp 0.845189458436964 0.590839781626909 0.108899236 0.034669638 prediction 0.50869935362011 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89692893 chr10:89692895 stopgain 1.000 1 23 hm5C_associated_SNPs_63926 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:89692878-89692922
64251 chr11 35685280 35685280 1 + C T SKCM 35685278 + 35685258 35685298 41 TGTGTCCAGTCATTGGGGCTCACCAGGGCCACCAACTCTCC TGTGTCCAGTCATTGGGGCTCATCAGGGCCACCAACTCTCC < 41bp 0.789018990581717 0.534677580693109 0.603468 0.82061553 prediction 0.508682819777216 Functional Loss - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35685278 chr11:35685280 synonymous SNV . 0 23 hm5C_associated_SNPs_63928 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:35685268-35685318
64251 chrX 149642014 149642014 1 + C T UCEC 149642012 + 149641992 149642032 41 CGGTGAAGCCCCAGCATCAACACGGGAACTCTTTCACTAGC CGGTGAAGCCCCAGCATCAACATGGGAACTCTTTCACTAGC < 41bp 0.770817466843865 0.516481817536028 0.7567868 0.64207166 prediction 0.508671298615676 Functional Loss - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149642012 chrX:149642014 synonymous SNV . 0 23 hm5C_associated_SNPs_63929 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:149642000-149642020
64251 chr1 110882747 110882747 1 + C T LUAD 110882745 + 110882725 110882765 41 ATGCCAGAGGCCGCCTGGTGCTCTATGACCGGCCTCTGAAG ATGCCAGAGGCCGCCTGGTGCTTTATGACCGGCCTCTGAAG < 41bp 0.759391760009576 0.505077736157899 0.8435364 0.052449018 prediction 0.508628047703353 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882745 chr1:110882747 synonymous SNV . 0 23 hm5C_associated_SNPs_63936 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr1:110882731-110882750
64251 chr6 33658852 33658852 1 + C T READ 33658850 + 33658830 33658870 41 TCCTCAAGGATGACTTCATTCTCGAGGTCGACCGGCTGCCC TCCTCAAGGATGACTTCATTCTTGAGGTCGACCGGCTGCCC < 41bp 0.793727099285564 0.539414756735042 0.07766625 0.008479893 prediction 0.508624685101044 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33658850 chr6:33658852 synonymous SNV . 0 23 hm5C_associated_SNPs_63937 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917673 chr6:33658851-33658871
64251 chr19 55853326 55853326 1 + G T PAAD 55853324 + 55853304 55853344 41 CATGGGGCCCGACAGAGTGACAGCACGAGAACTGTGCGAGA CATGGGGCCCGACAGAGTGACATCACGAGAACTGTGCGAGA < 41bp 0.754311975044941 0.41065973438353 0.3356285 0.16785887 prediction 0.508623950089881 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55853324 chr19:55853326 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_63938 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:55853326-55853345
64251 chr3 157920940 157920940 1 + C T UCEC 157920938 + 157920918 157920958 41 CAGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTA CAGAAGAACGCGTAGTCGGTCTTGGGATAGAGAACGACGTA < 41bp 0.754310392198014 0.482970141657018 0.04088798 0.085173875 prediction 0.508620784396028 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157920938 chr3:157920940 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_63939 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:157920906-157920945
64251 chr18 48575104 48575104 1 + A T LUAD 48575100 + 48575080 48575120 41 CATGTGATCTATGCCCGTCTCTGGAGGTGGCCTGATCTTCA CATGTGATCTATGCCCGTCTCTGGTGGTGGCCTGATCTTCA < 41bp 0.754308487133326 0.447059977652628 0.3559867 0.16103607 prediction 0.508616974266653 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48575100 chr18:48575104 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_63940 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:48575064-48575104
64251 chr3 127396078 127396078 1 + C T HNSC 127396076 + 127396056 127396096 41 CCCCACCTGCAGACCCCCGCCTCCGGGAGGACATGGCGCTG CCCCACCTGCAGACCCCCGCCTTCGGGAGGACATGGCGCTG < 41bp 0.8018467036681 0.547545488990899 0.21950978 0.21371922 prediction 0.508602429354402 Functional Loss - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127396076 chr3:127396078 synonymous SNV . 0 23 hm5C_associated_SNPs_63942 0 0 1 PPIG POSTAR2 ENCODE chr3:127396042-127396129
64251 chr11 59556354 59556354 1 + G C LUAD 59556350 + 59556330 59556370 41 GCCTTTATTTACCCAGAAACCAAGGATGACCTAGAGCAGCT GCCTTTATTTACCCAGAAACCAAGCATGACCTAGAGCAGCT < 41bp 0.754261932952753 0.465134491623717 0.6620052 0.27119273 prediction 0.508523865905506 Functional Loss - STX3 ENSG00000166900 CDS Human protein_coding chr11:59556350 chr11:59556354 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_63950 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:59556351-59556381
64251 chr17 73818665 73818665 1 + C T SKCM 73818663 + 73818643 73818683 41 GCCAGGGGCTGCCGAGCTGGCCCGACTTCGGCAAGAGCTGG GCCAGGGGCTGCCGAGCTGGCCTGACTTCGGCAAGAGCTGG < 41bp 0.780692357278874 0.526436083550724 0.02919203 0.0344612 prediction 0.5085125474563 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73818663 chr17:73818665 stopgain 0.998 1 23 hm5C_associated_SNPs_63953 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:73818645-73818689
64251 chr8 22432219 22432219 1 + G T LUSC 22432216 + 22432196 22432236 41 CCAGAAATTCGGAACGTTCCCTGGAAATTACGTTGCCCCGG CCAGAAATTCGGAACGTTCCCTGTAAATTACGTTGCCCCGG < 41bp 0.907791018726057 0.653541544251979 0.40676066 0.1431809 prediction 0.508498948948155 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22432216 chr8:22432219 stopgain 0.995 3 24 hm5C_associated_SNPs_63955 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:22432199-22432220
64251 chr2 74438944 74438944 1 + C T UCEC 74438942 + 74438922 74438962 41 ATGTGGGAATAAATAGAGTTCACGATCCTGTAACTGCCAAA ATGTGGGAATAAATAGAGTTCATGATCCTGTAACTGCCAAA < 41bp 0.801756769342777 0.547508985370617 0.04013455 0.035530716 prediction 0.50849556794432 Functional Loss - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74438942 chr2:74438944 synonymous SNV . 0 23 hm5C_associated_SNPs_63956 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:74438874-74438987
64251 chr4 110384718 110384718 1 + A T LUSC 110384714 + 110384694 110384734 41 CAGTACTCTAACGTGGTCATCTCCAGGCCTTCCATCGACTC CAGTACTCTAACGTGGTCATCTCCTGGCCTTCCATCGACTC < 41bp 0.754244246000301 0.405535383680573 0.9330604 0.16422337 prediction 0.508488492000602 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110384714 chr4:110384718 synonymous SNV . 0 25 hm5C_associated_SNPs_63957 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:110384683-110384723
64251 chr5 74651235 74651235 1 + C T COAD 74651233 + 74651213 74651253 41 AGTCCTTGCAGATGGGATGACTCGTGGCCCAGTTGTGCGTC AGTCCTTGCAGATGGGATGACTTGTGGCCCAGTTGTGCGTC < 41bp 0.754231560016776 0.464968790220286 0.19563967 0.20005056 prediction 0.508463120033553 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74651233 chr5:74651235 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_63960 0 0 6 CELF2 POSTAR2 GSE71264,GSM1831620 chr5:74651220-74651240
64251 chr11 47594983 47594983 1 - G A rs143529938 47594985 - 47594965 47595005 41 CCAACGCAGTCATTTATTATCGCGTAGGTGATAATGTGTGG CCAACGCAGTCATTTATTATCGTGTAGGTGATAATGTGTGG < 41bp 0.75422731113115 0.4951230691247 0.7348833 0.6047579 prediction 0.5084546222623 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594985 chr11:47594983 synonymous SNV . 0 23 hm5C_associated_SNPs_63962 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:47594949-47594989
64251 chr12 4461606 4461606 1 + G T GBM 4461604 + 4461584 4461624 41 TAATTCAGACAGCGGTATTCCAGGATTAGCAGCCAGTGTCT TAATTCAGACAGCGGTATTCCATGATTAGCAGCCAGTGTCT < 41bp 0.866099604541578 0.61188656360482 0.87811077 0.21285182 prediction 0.508426081873516 Functional Loss - TIGAR ENSG00000078237 CDS Human protein_coding chr12:4461604 chr12:4461606 stopgain 0.008 0 23 hm5C_associated_SNPs_63965 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:4461583-4461619
64251 chr5 14681593 14681593 1 + G T rs147790160 14681591 + 14681571 14681611 41 AGGGCTATGAAGAGGTTTCTCAGAAGTTCACCTCCATACGG AGGGCTATGAAGAGGTTTCTCATAAGTTCACCTCCATACGG < 41bp 0.871265954308849 0.617071046241297 0.85536945 0.24377134 prediction 0.508389816135103 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14681591 chr5:14681593 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_63968 0 0 10 BUD13 POSTAR2 ENCODE chr5:14681546-14681632
64251 chr9 34241797 34241797 1 + T C LIHC 34241796 + 34241776 34241816 41 AGTGTCCCTCCCCCCTATACCTGCAGTAAGCAATATCAAAT AGTGTCCCTCCCCCCTATACCCGCAGTAAGCAATATCAAAT < 41bp 0.769600227109027 0.515423675466421 0.07308021 0.2721689 prediction 0.50835310328521 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241796 chr9:34241797 synonymous SNV . 0 22 hm5C_associated_SNPs_63973 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:34241761-34241797
64251 chr19 16989177 16989177 1 + C T UCEC 16989175 + 16989155 16989195 41 CCGAGGACTACATGTACCGTCGCGGGACCCTCTGCCGGGCC CCGAGGACTACATGTACCGTCGTGGGACCCTCTGCCGGGCC < 41bp 0.7541637789484 0.496449698122747 0.782174 0.8409351 prediction 0.508327557896799 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16989175 chr19:16989177 synonymous SNV . 0 23 hm5C_associated_SNPs_63976 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:16989163-16989188
64251 chr5 138163321 138163321 1 + C T THYM 138163319 + 138163299 138163339 41 GATGGCCGACTCGTCCTGCACGCGTGATGACCGTCGTGAGC GATGGCCGACTCGTCCTGCACGTGTGATGACCGTCGTGAGC < 41bp 0.802115465057185 0.547956740318043 0.34201166 0.3559092 prediction 0.508317449478283 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138163319 chr5:138163321 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_63977 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr5:138163299-138163324
64251 chr6 132172368 132172368 1 + A C rs1044498 132172367 + 132172347 132172387 41 TGTTCAGATGACTGCAAGGACAAGGGCGACTGCTGCATCAA TGTTCAGATGACTGCAAGGACCAGGGCGACTGCTGCATCAA < 41bp 0.754143627839451 0.496948404244501 0.53301775 0.4558395 prediction 0.508287255678902 Functional Loss - ENPP1 ENSG00000197594 CDS Human protein_coding chr6:132172367 chr6:132172368 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_63982 6 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:132172362-132172389
64251 chr3 136646939 136646939 1 + G T UCEC 136646937 + 136646917 136646957 41 AGAATGAGAGATTATGGCTTCTGGATGATTCTAAGTCCTGG AGAATGAGAGATTATGGCTTCTTGATGATTCTAAGTCCTGG < 41bp 0.854934751923683 0.600801457647443 0.28354377 0.10073838 prediction 0.508266588552479 Functional Loss - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136646937 chr3:136646939 synonymous SNV . 0 23 hm5C_associated_SNPs_63985 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr3:136646926-136646948
64251 chr17 49337993 49337993 1 + A C rs117093534 49337989 + 49337969 49338009 41 AATGAAACTGGACCGGAGAACCGGAGCGAAGCCGAAGCGGA AATGAAACTGGACCGGAGAACCGGCGCGAAGCCGAAGCGGA < 41bp 0.901055272212497 0.646925650348533 0.84620535 0.7190335 prediction 0.508259243727929 Functional Loss - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49337989 chr17:49337993 synonymous SNV . 0 25 hm5C_associated_SNPs_63986 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:49337972-49337999
64251 chr10 5496321 5496321 1 + G T LUAD 5496318 + 5496298 5496338 41 AGAAACAGGATCCAAGAGTCCAAGACTTCCTCCAGCGATGT AGAAACAGGATCCAAGAGTCCAATACTTCCTCCAGCGATGT < 41bp 0.754123364244964 0.363259197857348 0.054980963 0.020142794 prediction 0.508246728489928 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5496318 chr10:5496321 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_63987 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:5496289-5496327
64251 chr15 89164573 89164573 1 + G C rs545680983 89164572 + 89164552 89164592 41 TGTGGGAGCTGCCGGCTTTCCGGACGCCACGTGCAGACCGG TGTGGGAGCTGCCGGCTTTCCCGACGCCACGTGCAGACCGG < 41bp 0.823360923020209 0.569270322975352 0.923237 0.8944127 prediction 0.508181200089714 Functional Loss - AEN ENSG00000181026 UTR5 Human protein_coding chr15:89164572 chr15:89164573 . . 0 22 hm5C_associated_SNPs_63992 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:89164560-89164580
64251 chr1 160098533 160098533 1 + C T SARC 160098531 + 160098511 160098551 41 GAGACGCTGGGCTCCACGTCCACCATCTGCTCGGACAAGAC GAGACGCTGGGCTCCACGTCCATCATCTGCTCGGACAAGAC < 41bp 0.754084399789604 0.463427378330894 0.21838897 0.29745328 prediction 0.508168799579207 Functional Loss - ATP1A2 ENSG00000018625 CDS Human protein_coding chr1:160098531 chr1:160098533 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_63994 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585672 chr1:160098520-160098540
64251 chr17 80560120 80560120 1 + G T rs529205464 80560118 + 80560098 80560138 41 CGCATGGAACCTTGAGAACCCAGGGACGAGCCAGTGCCGGG CGCATGGAACCTTGAGAACCCATGGACGAGCCAGTGCCGGG < 41bp 0.869201316451867 0.615120317862572 0.7298756 0.25659674 prediction 0.508161997178591 Functional Loss - FOXK2 ENSG00000141568 UTR3 Human protein_coding chr17:80560118 chr17:80560120 . . 0 23 hm5C_associated_SNPs_63995 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:80560024-80560166
64251 chr4 7055893 7055893 1 + C T BRCA 7055891 + 7055871 7055911 41 ACCTGGGGAAGGCCTGCATCCCCGACACCATCCCCAACCGC ACCTGGGGAAGGCCTGCATCCCTGACACCATCCCCAACCGC < 41bp 0.754080958610651 0.487255741599703 0.20465219 0.10850802 prediction 0.508161917221303 Functional Loss - TADA2B ENSG00000173011 CDS Human protein_coding chr4:7055891 chr4:7055893 synonymous SNV . 0 23 hm5C_associated_SNPs_63996 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:7055886-7055954
64251 chr3 172048460 172048460 1 + C T LUSC 172048458 + 172048438 172048478 41 GTAAGCCAGAAGGCTGTTCACCCGAGGAAGTGATCACCTAC GTAAGCCAGAAGGCTGTTCACCTGAGGAAGTGATCACCTAC < 41bp 0.754073013445671 0.483501927223666 0.5653201 0.5807758 prediction 0.508146026891341 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172048458 chr3:172048460 synonymous SNV . 0 23 hm5C_associated_SNPs_63999 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:172048425-172048463
64251 chr6 33179254 33179254 1 + G T LUAD 33179252 + 33179232 33179272 41 GGCCCCCAGCCCCCCAGAGCCAGGTGGAGAAATTGAGCTCG GGCCCCCAGCCCCCCAGAGCCATGTGGAGAAATTGAGCTCG < 41bp 0.814269034769257 0.560203571345882 0.9363682 0.6020586 prediction 0.508130926846749 Functional Loss - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179252 chr6:33179254 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_64003 0 0 4 DDX24 POSTAR2 ENCODE chr6:33179198-33179254
64251 chr14 56763604 56763604 1 + C T UCEC 56763602 + 56763582 56763622 41 AACTGGGGCCATCGGAGTGACACGGAGGCCAACGAGAGGGA AACTGGGGCCATCGGAGTGACATGGAGGCCAACGAGAGGGA < 41bp 0.770616832169463 0.516559071312629 0.83496094 0.8151288 prediction 0.508115521713667 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56763602 chr14:56763604 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_64007 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:56763592-56763615
64251 chr17 4858482 4858482 1 + C T LAML 4858480 + 4858460 4858500 41 AAGGAAGCCATGCGCATTGGCGCCGAGGTCTACCACCACCT AAGGAAGCCATGCGCATTGGCGTCGAGGTCTACCACCACCT < 41bp 0.779918646136953 0.525870170318807 0.30943954 0.11846715 prediction 0.508096951636293 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858480 chr17:4858482 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_64010 0 0 1 SRSF9 POSTAR2 ENCODE chr17:4858434-4858580
64251 chr1 110882978 110882978 1 + T C KIRP 110882977 + 110882957 110882997 41 GGCTCTTGGCCGCCTGCCCCCTCCACCTCCGCCACCATTGC GGCTCTTGGCCGCCTGCCCCCCCCACCTCCGCCACCATTGC < 41bp 0.754043787193204 0.497676727709848 0.9154317 0.27034658 prediction 0.508087574386408 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882977 chr1:110882978 synonymous SNV . 0 22 hm5C_associated_SNPs_64013 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:110882923-110883012
64251 chr6 126359958 126359958 1 + G T UCEC 126359955 + 126359935 126359975 41 GGGGTAACAAAAAGAATTGCCAAGGAAGAAAAATCCACCCA GGGGTAACAAAAAGAATTGCCAATGAAGAAAAATCCACCCA < 41bp 0.754042260822967 0.385181980665758 0.37569007 0.063192695 prediction 0.508084521645933 Functional Loss - TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126359955 chr6:126359958 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_64014 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:126359928-126359962
64251 chr14 21167913 21167913 1 + C T UCEC 21167911 + 21167891 21167931 41 AGATATCGGGCCATAGCGAGCACTAGACGTGTTGTCATTGC AGATATCGGGCCATAGCGAGCATTAGACGTGTTGTCATTGC < 41bp 0.756686234583621 0.502650226044766 0.33906314 0.20459756 prediction 0.50807201707771 Functional Loss - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167911 chr14:21167913 nonsynonymous SNV 0.075 2 23 hm5C_associated_SNPs_64015 0 0 3 RPS3 POSTAR2 ENCODE chr14:21167911-21167965
64251 chr3 127337955 127337955 1 + G T OV 127337953 + 127337933 127337973 41 GAGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCGCCAT GAGGAGGGGCTGGCCAATGGCATCGCTGCTGAGCCCGCCAT < 41bp 0.894525969375939 0.640491054080888 0.835803 0.34253448 prediction 0.508069830590103 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127337953 chr3:127337955 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_64016 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127337936-127337957
64251 chr3 119217754 119217754 1 + C T LUAD 119217752 + 119217732 119217772 41 CGGAATCTGGATGGGACCGCCTCCGGGAGCTGTTTGGCAAA CGGAATCTGGATGGGACCGCCTTCGGGAGCTGTTTGGCAAA < 41bp 0.780753937935752 0.52673397836805 0.35815984 0.21873203 prediction 0.508039919135403 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119217752 chr3:119217754 synonymous SNV . 0 23 hm5C_associated_SNPs_64019 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:119217728-119217757
64251 chr7 99971834 99971834 1 + A C rs1859788 99971833 + 99971813 99971853 41 TGGAGACGGGGCCACTTCCACAGGCAGTCCTTCTACAGCAC TGGAGACGGGGCCACTTCCACCGGCAGTCCTTCTACAGCAC < 41bp 0.771977485593633 0.517961584620497 0.7983451 0.3514847 prediction 0.508031801946272 Functional Loss - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971833 chr7:99971834 synonymous SNV . 0 22 hm5C_associated_SNPs_64020 0 1 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99971805-99971835
64251 chr20 61917434 61917434 1 + G T UCEC 61917432 + 61917412 61917452 41 TGAGGCGCTCTGCGGACAGACGGGGAGGGAAGAGCAGGCCT TGAGGCGCTCTGCGGACAGACGTGGAGGGAAGAGCAGGCCT < 41bp 0.88266756770101 0.628677138927588 0.90380764 0.8595934 prediction 0.507980857546844 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61917432 chr20:61917434 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_64025 0 0 8 HNRNPM POSTAR2 ENCODE chr20:61917403-61917459
64251 chr14 78182137 78182137 1 + G T UCEC 78182135 + 78182115 78182155 41 GACAAGGAGACTGGCTTTCACAGAGGTTTGGGTTGGGTTCA GACAAGGAGACTGGCTTTCACATAGGTTTGGGTTGGGTTCA < 41bp 0.753974217816176 0.427072992420543 0.8875855 0.26224738 prediction 0.507948435632351 Functional Loss - SLIRP ENSG00000119705 CDS Human protein_coding chr14:78182135 chr14:78182137 stopgain 0.979 3 23 hm5C_associated_SNPs_64028 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr14:78182133-78182154
64251 chr19 51831948 51831948 1 + G T UCEC 51831946 + 51831926 51831966 41 CCCAGGATCCCTGGAGAACTCAGCCCCGAGGCCCCCAGGGC CCCAGGATCCCTGGAGAACTCATCCCCGAGGCCCCCAGGGC < 41bp 0.753920544498726 0.41305964892256 0.2625388 0.3128422 prediction 0.507841088997453 Functional Loss - IGLON5 ENSG00000142549 CDS Human protein_coding chr19:51831946 chr19:51831948 nonsynonymous SNV 0.977 2 23 hm5C_associated_SNPs_64041 0 0 1 BUD13 POSTAR2 ENCODE chr19:51831889-51831978
64251 chr12 53682997 53682997 1 + G C LUAD 53682996 + 53682976 53683016 41 TGGCCTTGTGCCTGGGCCACCGGGATCCTTATGCCACTGCT TGGCCTTGTGCCTGGGCCACCCGGATCCTTATGCCACTGCT < 41bp 0.753917246707083 0.435754460761613 0.811537 0.5313941 prediction 0.507834493414165 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53682996 chr12:53682997 nonsynonymous SNV 0.976 2 22 hm5C_associated_SNPs_64042 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:53682944-53682997
64251 chr13 28239969 28239969 1 + C T UCEC 28239967 + 28239947 28239987 41 CAGGCCCAGAAAGAAGAAAACCCGAAGAAACACAGAAGCCA CAGGCCCAGAAAGAAGAAAACCTGAAGAAACACAGAAGCCA < 41bp 0.757277588990257 0.50336639067736 0.1467869 0.0643968 prediction 0.507822396625794 Functional Loss - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28239967 chr13:28239969 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_64044 0 0 1 NOP58 POSTAR2 GSE43666,GSM1067862 chr13:28239959-28239997
64251 chr5 128442739 128442739 1 + G T COAD 128442737 + 128442717 128442757 41 TCATCAAGAAGCATGATGGACAGGATGTTTGCCCTCGAGGT TCATCAAGAAGCATGATGGACATGATGTTTGCCCTCGAGGT < 41bp 0.876097419368371 0.622188383999494 0.2857933 0.05999744 prediction 0.507818070737754 Functional Loss - ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128442737 chr5:128442739 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64046 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:128442724-128442748
64251 chr9 132566497 132566497 1 + G T UCEC 132566494 + 132566474 132566514 41 CACGGCTGGGCTGGCACAGGCAAGAATTTTGTCAGTCAAAT CACGGCTGGGCTGGCACAGGCAATAATTTTGTCAGTCAAAT < 41bp 0.75390858320649 0.359057425072958 0.25029993 0.22304302 prediction 0.50781716641298 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132566494 chr9:132566497 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_64047 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:132566475-132566504
64251 chrX 47040964 47040964 1 + C T STAD 47040962 + 47040942 47040982 41 TGTCGATGCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCT TGTCGATGCAGGCTTTCTCTCGTGCCCAGCCTGGTGCTGCT < 41bp 0.754711478641433 0.500819264419377 0.8856449 0.8944487 prediction 0.507784428444112 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47040962 chrX:47040964 synonymous SNV . 0 23 hm5C_associated_SNPs_64051 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47040923-47040967
64251 chr16 90102839 90102839 1 + G T LUAD 90102836 + 90102816 90102856 41 TGAAGATGCTGAGGGACGAACTCGACTTGCGGAGAAAGACT TGAAGATGCTGAGGGACGAACTCTACTTGCGGAGAAAGACT < 41bp 0.753881462314491 0.369960579554182 0.8920766 0.47694197 prediction 0.507762924628983 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90102836 chr16:90102839 nonsynonymous SNV 0.963 4 24 hm5C_associated_SNPs_64052 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr16:90102789-90102846
64251 chr14 76965080 76965080 1 + G T LUSC 76965077 + 76965057 76965097 41 GACGGTGCGGAGGCCTGGGCCAGGGCTGACTCCCTTCAGGA GACGGTGCGGAGGCCTGGGCCAGTGCTGACTCCCTTCAGGA < 41bp 0.753881454239921 0.348234769636231 0.9358832 0.69902045 prediction 0.507762908479842 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76965077 chr14:76965080 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_64053 0 0 5 DDX24 POSTAR2 ENCODE chr14:76964999-76965087
64251 chr14 76965079 76965079 1 + G T LUSC 76965077 + 76965057 76965097 41 GACGGTGCGGAGGCCTGGGCCAGGGCTGACTCCCTTCAGGA GACGGTGCGGAGGCCTGGGCCATGGCTGACTCCCTTCAGGA < 41bp 0.753881454239921 0.396646631326833 0.9358832 0.4681787 prediction 0.507762908479842 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76965077 chr14:76965079 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_64054 0 0 5 DDX24 POSTAR2 ENCODE chr14:76964999-76965087
64251 chr17 4858731 4858731 1 + G T STAD 4858728 + 4858708 4858748 41 AGCTGCTGAAGACGGCCATCCAGGCGGCTGGTTACCCAGAC AGCTGCTGAAGACGGCCATCCAGTCGGCTGGTTACCCAGAC < 41bp 0.753866282668812 0.349284558495388 0.8843744 0.2932922 prediction 0.507732565337623 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858728 chr17:4858731 nonsynonymous SNV 0.797 1 24 hm5C_associated_SNPs_64058 0 0 4 PPIG POSTAR2 ENCODE chr17:4858701-4858768
64251 chr17 27187487 27187487 1 + G T UCEC 27187484 + 27187464 27187504 41 CCGAAGGGCCACGTGATCTCCCAGATAGCACAGGAGGCAGG CCGAAGGGCCACGTGATCTCCCATATAGCACAGGAGGCAGG < 41bp 0.75386448560701 0.377864178221737 0.0720782 0.025801986 prediction 0.50772897121402 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27187484 chr17:27187487 nonsynonymous SNV 0.843 1 24 hm5C_associated_SNPs_64060 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:27187487-27187520
64251 chr9 35846991 35846991 1 + C T BLCA 35846989 + 35846969 35847009 41 ACCTTCACCATGTTCTTCTCCACGGTATGCGGTGGTGTCTG ACCTTCACCATGTTCTTCTCCATGGTATGCGGTGGTGTCTG < 41bp 0.767365291683216 0.513501166796368 0.20066217 0.10230309 prediction 0.507728249773697 Functional Loss - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35846989 chr9:35846991 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64061 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:35846980-35847009
64251 chr6 37250042 37250042 1 + C T SKCM 37250040 + 37250020 37250060 41 ATCCCCCTCGTTGCCCGGATCTCGGATCAGAACGCTTCTGG ATCCCCCTCGTTGCCCGGATCTTGGATCAGAACGCTTCTGG < 41bp 0.807480867240346 0.553626845776883 0.44969153 0.25929976 prediction 0.507708042926926 Functional Loss - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37250040 chr6:37250042 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_64067 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:37250041-37250098
64251 chr2 234368877 234368877 1 + A C LIHC 234368876 + 234368856 234368896 41 TGAAGTCCTGGGAAGACAAGCAGAAGTGCGAGCTGCCCCGC TGAAGTCCTGGGAAGACAAGCCGAAGTGCGAGCTGCCCCGC < 41bp 0.780996801846699 0.527153249776418 0.92153066 0.34323508 prediction 0.507687104140562 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234368876 chr2:234368877 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_64069 0 0 1 PPIG POSTAR2 ENCODE chr2:234368849-234368896
64251 chr20 56136665 56136665 1 + C T OV 56136663 + 56136643 56136683 41 AGATGGAGGAAGAGGGCATCCTCAGGCGGCTGAAGAAGTAT AGATGGAGGAAGAGGGCATCCTTAGGCGGCTGAAGAAGTAT < 41bp 0.769984455292532 0.516148855122382 0.2759927 0.7316943 prediction 0.507671200340298 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56136663 chr20:56136665 synonymous SNV . 0 23 hm5C_associated_SNPs_64070 0 0 3 BUD13 POSTAR2 ENCODE chr20:56136635-56136730
64251 chr2 233680442 233680442 1 + G T HNSC 233680440 + 233680420 233680460 41 GCAGCTAGAGAAGGCCAAAGCTGCAAAGGTCTGAAACTCAT GCAGCTAGAGAAGGCCAAAGCTTCAAAGGTCTGAAACTCAT < 41bp 0.753834493712516 0.448794501594168 0.27024138 0.17617232 prediction 0.507668987425031 Functional Loss - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233680440 chr2:233680442 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64071 0 0 4 U2AF2 POSTAR2 GSE83923,CSM2221661 chr2:233680440-233680460
64251 chr3 41280713 41280713 1 + C T LUSC 41280711 + 41280691 41280731 41 TGGAACATGAGATGGGTGGCCACCACCCTGGTGCTGACTAT TGGAACATGAGATGGGTGGCCATCACCCTGGTGCTGACTAT < 41bp 0.808450614712116 0.554618818199057 0.16076896 0.23428744 prediction 0.507663593026118 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41280711 chr3:41280713 synonymous SNV . 0 23 hm5C_associated_SNPs_64072 0 0 27 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:41280598-41280748
64251 chr17 61685600 61685600 1 + G T rs148429841 61685597 + 61685577 61685617 41 TCCCGACACCCTCTCGGATGCAGGGCAGGACCACCCAGCTG TCCCGACACCCTCTCGGATGCAGTGCAGGACCACCCAGCTG < 41bp 0.875379372034191 0.621557387979857 0.44592753 0.06455633 prediction 0.50764396810867 Functional Loss - TACO1 ENSG00000136463 UTR3 Human protein_coding chr17:61685597 chr17:61685600 . . 0 24 hm5C_associated_SNPs_64075 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:61685593-61685620
64251 chr11 43904227 43904227 1 + C T ESCA 43904225 + 43904205 43904245 41 GGAGGAAAAAAGACGGCGAGCCCGAGTTCAGGGAGCCTGGG GGAGGAAAAAAGACGGCGAGCCTGAGTTCAGGGAGCCTGGG < 41bp 0.78834863974038 0.534528045624226 0.20024928 0.21329093 prediction 0.507641188232308 Functional Loss - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43904225 chr11:43904227 stopgain 0.993 1 23 hm5C_associated_SNPs_64077 0 0 1 YBX3 POSTAR2 ENCODE chr11:43904199-43904250
64251 chr2 238978060 238978060 1 + G T LUSC 238978057 + 238978037 238978077 41 AAGCCCCATTTCATTACTTCCTCGGTGGAACACGACTCCAT AAGCCCCATTTCATTACTTCCTCTGTGGAACACGACTCCAT < 41bp 0.753815023544007 0.368059631319366 0.24344596 0.12928039 prediction 0.507630047088015 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238978057 chr2:238978060 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_64078 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:238978039-238978060
64251 chr8 145161313 145161313 1 + A C STAD 145161312 + 145161292 145161332 41 ACTTCAAGGATCTGAAACCACAGCTGTGGAACGCGGTGGAC ACTTCAAGGATCTGAAACCACCGCTGTGGAACGCGGTGGAC < 41bp 0.765357930596908 0.51155072027456 0.3909058 0.20307603 prediction 0.507614420644696 Functional Loss - MAF1 ENSG00000179632 CDS Human protein_coding chr8:145161312 chr8:145161313 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_64080 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:145161305-145161333
64251 chr12 9070294 9070294 1 + G T UCEC 9070292 + 9070272 9070312 41 TCATGGAGACTGAGAGCGAGCAGAACTCCAATTCCACCAAT TCATGGAGACTGAGAGCGAGCATAACTCCAATTCCACCAAT < 41bp 0.753804660092987 0.409819774645205 0.32807207 0.19813591 prediction 0.507609320185974 Functional Loss - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9070292 chr12:9070294 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64081 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:9070264-9070312
64251 chr19 54606463 54606463 1 + G T UCEC 54606461 + 54606441 54606481 41 GAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCG GAATGCCTGGGACAAGGAGCCATTGCTGGTCGTGTCCTTCG < 41bp 0.753798272391418 0.404242041237106 0.44755733 0.22871816 prediction 0.507596544782836 Functional Loss - NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54606461 chr19:54606463 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_64083 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54606459-54606484
64251 chr16 731848 731848 1 - C G UCEC 731849 - 731829 731869 41 CAATGCAGGCCTGCTGGGCCCGGACGTGGCTGTCGTCCTCA CAATGCAGGCCTGCTGGGCCCCGACGTGGCTGTCGTCCTCA < 41bp 0.772004103712898 0.518208934771885 0.7276361 0.04020813 prediction 0.507590337882025 Functional Loss - STUB1 ENSG00000103266 CDS Human protein_coding chr16:731849 chr16:731848 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_64084 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:731738-731882
64251 chr19 2810443 2810443 1 + C T COAD 2810441 + 2810421 2810461 41 CCGCACAGGCAGCGCCGTGCCCCGGGAGCTCCTGGAGAAGC CCGCACAGGCAGCGCCGTGCCCTGGGAGCTCCTGGAGAAGC < 41bp 0.765903760928351 0.512123274818287 0.07004157 0.055924863 prediction 0.507560972220128 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810441 chr19:2810443 nonsynonymous SNV 0.045 2 23 hm5C_associated_SNPs_64088 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:2810429-2810457
64251 chr2 209167032 209167032 1 + C T COAD 209167030 + 209167010 209167050 41 GGCTGGATTGTGTTAGTCATCACGACCAGCTTTTCAGAGAT GGCTGGATTGTGTTAGTCATCATGACCAGCTTTTCAGAGAT < 41bp 0.805719082055007 0.551939871940693 0.26126978 0.1962964 prediction 0.507558420228627 Functional Loss - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209167030 chr2:209167032 synonymous SNV . 0 23 hm5C_associated_SNPs_64089 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:209167029-209167050
64251 chr7 91570445 91570445 1 + A T STAD 91570441 + 91570421 91570461 41 ACGAGGAGAGACAGAAGAAGCTGGAGGCCGGCAAAGCCAAG ACGAGGAGAGACAGAAGAAGCTGGTGGCCGGCAAAGCCAAG < 41bp 0.757753698738268 0.503987063191776 0.4087186 0.35981432 prediction 0.507533271092984 Functional Loss - AKAP9 ENSG00000127914 CDS Human protein_coding chr7:91570441 chr7:91570445 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_64091 0 0 9 PRPF8 POSTAR2 ENCODE chr7:91570444-91570574
64251 chr1 154962880 154962880 1 + G T LUAD 154962877 + 154962857 154962897 41 GGCCCTGGGTGAACTGCAGGCACGGCACCCCCAGCTGGAGG GGCCCTGGGTGAACTGCAGGCACTGCACCCCCAGCTGGAGG < 41bp 0.913105212057022 0.659345223511754 0.12719843 0.07546386 prediction 0.507519977090537 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962877 chr1:154962880 nonsynonymous SNV 0.828 0 24 hm5C_associated_SNPs_64093 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154962867-154962923
64251 chr16 28847370 28847370 1 + G T BLCA 28847367 + 28847347 28847387 41 CATGGGGGGCCCCCCCAAGGCGCGGTGCCCCAGAGTGGGGT CATGGGGGGCCCCCCCAAGGCGCTGTGCCCCAGAGTGGGGT < 41bp 0.902048620635421 0.648290394404688 0.3678686 0.12652728 prediction 0.507516452461465 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847367 chr16:28847370 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_64094 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28847360-28847380
64251 chr14 24846882 24846882 1 + G T LAML 24846880 + 24846860 24846900 41 CCGAGACCTGAGTGGCTTCCCTGCACCTCCTGGAGAAGAGC CCGAGACCTGAGTGGCTTCCCTTCACCTCCTGGAGAAGAGC < 41bp 0.753752683535751 0.476228225588012 0.18926004 0.07643363 prediction 0.507505367071502 Functional Loss - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24846880 chr14:24846882 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_64096 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:24846845-24846882
64251 chr2 70015273 70015273 1 + G T LUSC 70015270 + 70015250 70015290 41 TGAGGAAGGCCATGAAAGGGCTCGGTATGTGTCCTGCTGGA TGAGGAAGGCCATGAAAGGGCTCTGTATGTGTCCTGCTGGA < 41bp 0.753739738058698 0.37216990297474 0.13584256 0.08235678 prediction 0.507479476117397 Functional Loss - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70015270 chr2:70015273 nonsynonymous SNV 0.112 4 24 hm5C_associated_SNPs_64100 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:70015264-70015285
64251 chr6 168291648 168291648 1 + G T OV 168291645 + 168291625 168291665 41 AAGGGAAAGGAGAGAGCTGACGGGTCTGGCTATGGCTCCAC AAGGGAAAGGAGAGAGCTGACGGTTCTGGCTATGGCTCCAC < 41bp 0.753712690483327 0.372359646857692 0.83108735 0.2102339 prediction 0.507425380966654 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168291645 chr6:168291648 synonymous SNV . 0 24 hm5C_associated_SNPs_64106 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:168291647-168291648
64251 chr5 140475046 140475046 1 + G T LUSC 140475043 + 140475023 140475063 41 CTAGATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGT CTAGATGGCGGGAGTCCACCCAGTTCCGGCACGGCCCTGGT < 41bp 0.753711948705731 0.345398301976667 0.8994322 0.34490836 prediction 0.507423897411462 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475043 chr5:140475046 nonsynonymous SNV 0.923 1 24 hm5C_associated_SNPs_64107 0 0 2 SND1 POSTAR2 ENCODE chr5:140475016-140475062
64251 chr21 47918713 47918713 1 + G T SARC 47918711 + 47918691 47918731 41 GCCGGGGGCCGCCGCTACCACTGCACTCGCAGGCCTCGAGG GCCGGGGGCCGCCGCTACCACTTCACTCGCAGGCCTCGAGG < 41bp 0.868048257865442 0.614339851579682 0.23324373 0.17091855 prediction 0.50741681257152 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47918711 chr21:47918713 nonsynonymous SNV 0.012 0 23 hm5C_associated_SNPs_64109 0 0 2 DDX24 POSTAR2 ENCODE chr21:47918672-47918745
64251 chr6 142468431 142468431 1 + G T LUAD 142468429 + 142468409 142468449 41 TGAGTTCGGAGTAGAGATGGCCGCGCTTGCACCGCTGCCCC TGAGTTCGGAGTAGAGATGGCCTCGCTTGCACCGCTGCCCC < 41bp 0.753700977803854 0.404693952646222 0.68164766 0.52551395 prediction 0.507401955607709 Functional Loss - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142468429 chr6:142468431 nonsynonymous SNV 0.982 0 23 hm5C_associated_SNPs_64113 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:142468408-142468433
64251 chr18 56348505 56348505 1 + G T UCEC 56348503 + 56348483 56348523 41 TGAAAAAGGTTGCACAGTCACAGAATTGAGTGATTTCCTGC TGAAAAAGGTTGCACAGTCACATAATTGAGTGATTTCCTGC < 41bp 0.880571695801201 0.626875954873118 0.616681 0.5341495 prediction 0.507391481856168 Functional Loss - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56348503 chr18:56348505 stopgain 0.990 0 23 hm5C_associated_SNPs_64114 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:56348484-56348514
64251 chr17 27015135 27015135 1 + C T UCEC 27015133 + 27015113 27015153 41 TGAAGCAGAACAACACCCGGCTCGAGAGCCGGACCCAGCTG TGAAGCAGAACAACACCCGGCTTGAGAGCCGGACCCAGCTG < 41bp 0.753689280588331 0.467233395717111 0.34329057 0.27539653 prediction 0.507378561176661 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27015133 chr17:27015135 synonymous SNV . 0 23 hm5C_associated_SNPs_64119 0 0 5 FMR1 POSTAR2 ENCODE chr17:27015123-27015187
64251 chr11 61897387 61897387 1 + G T LUAD 61897385 + 61897365 61897405 41 GCGTGTGACCCGTGCTGCGGCTGCAGCTGCCGCGGCTACCA GCGTGTGACCCGTGCTGCGGCTTCAGCTGCCGCGGCTACCA < 41bp 0.882190739392015 0.628521049746717 0.5847567 0.33842582 prediction 0.507339379290598 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897385 chr11:61897387 nonsynonymous SNV 0.006 4 23 hm5C_associated_SNPs_64123 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:61897386-61897387
64251 chr10 135165539 135165539 1 + C T rs145387630 135165537 + 135165517 135165557 41 GGGCGCCCGTGTGGTGGAGCCTCCGGAGAAGGACGACCAGC GGGCGCCCGTGTGGTGGAGCCTTCGGAGAAGGACGACCAGC < 41bp 0.7759616678978 0.522299544456591 0.7968328 0.75486267 prediction 0.507324246882418 Functional Loss - PRAP1 ENSG00000165828;ENSG00000198546 CDS Human other chr10:135165537 chr10:135165539 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_64124 0 0 3 RPS3 POSTAR2 ENCODE chr10:135165509-135165562
64251 chr2 176973654 176973654 1 + G T SKCM 176973652 + 176973632 176973672 41 CAGTTGCCCCCCAGCGGTCCCGGAAAAAGCGCTGTCCCTAT CAGTTGCCCCCCAGCGGTCCCGTAAAAAGCGCTGTCCCTAT < 41bp 0.753642977509811 0.424918576029903 0.7922407 0.1779382 prediction 0.507285955019623 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973652 chr2:176973654 synonymous SNV . 0 23 hm5C_associated_SNPs_64127 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176973620-176973720
64251 chrX 140993218 140993218 1 + G T LUAD 140993216 + 140993196 140993236 41 GGACAAGGATATGCCTACTGCTGGGATGCCGAGTCTTCTCC GGACAAGGATATGCCTACTGCTTGGATGCCGAGTCTTCTCC < 41bp 0.88326942426425 0.62962667647877 0.6777396 0.37159848 prediction 0.507285495570959 Functional Loss - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140993216 chrX:140993218 nonsynonymous SNV 0.020 2 23 hm5C_associated_SNPs_64128 0 0 1 RPS3 POSTAR2 ENCODE chrX:140993206-140993239
64251 chr11 47593141 47593141 1 + G T THCA 47593138 + 47593118 47593158 41 GTTCCACAAGCAGATTACTGCACGGGCAACAAAGGATGGGA GTTCCACAAGCAGATTACTGCACTGGCAACAAAGGATGGGA < 41bp 0.753617248179768 0.427527518338276 0.48998415 0.15028578 prediction 0.507234496359536 Functional Loss - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47593138 chr11:47593141 nonsynonymous SNV 0.814 0 24 hm5C_associated_SNPs_64133 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:47593118-47593141
64251 chr22 18185123 18185123 1 + G T rs78160286 18185121 + 18185101 18185141 41 GACATACCTGGAGGACTATTCGGCAGAGTACATCATTCAGC GACATACCTGGAGGACTATTCGTCAGAGTACATCATTCAGC < 41bp 0.856507667126061 0.602913148937667 0.8010901 0.13275105 prediction 0.507189036376787 Functional Loss - BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18185121 chr22:18185123 nonsynonymous SNV 0.942 4 23 hm5C_associated_SNPs_64139 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr22:18185092-18185126
64251 chr10 95279536 95279536 1 + G T UCEC 95279533 + 95279513 95279553 41 TCTTAAGGAGCTCCGAAAAGCAAGAAATCAAATAACACAGT TCTTAAGGAGCTCCGAAAAGCAATAAATCAAATAACACAGT < 41bp 0.753593618043119 0.380004959078731 0.8965389 0.90881026 prediction 0.507187236086237 Functional Loss - CEP55 ENSG00000138180 CDS Human protein_coding chr10:95279533 chr10:95279536 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_64140 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr10:95279527-95279563
64251 chr6 138197249 138197249 1 + G T LUSC 138197246 + 138197226 138197266 41 GCTACAGATACCCCATTGTTCTCGGCTATGACAGCCATCAT GCTACAGATACCCCATTGTTCTCTGCTATGACAGCCATCAT < 41bp 0.753592071283999 0.367782411064329 0.061233163 0.01908195 prediction 0.507184142567997 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138197246 chr6:138197249 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_64141 0 0 1 PPIG POSTAR2 ENCODE chr6:138197205-138197249
64251 chr11 57463496 57463496 1 + C T rs140343860 57463494 + 57463474 57463514 41 ACACAGGGTTGCGAACACACCTCGGCTTGGCTACTAATGAG ACACAGGGTTGCGAACACACCTTGGCTTGGCTACTAATGAG < 41bp 0.809902490630522 0.556311576829801 0.67290705 0.5773317 prediction 0.507181827601442 Functional Loss - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57463494 chr11:57463496 synonymous SNV . 0 23 hm5C_associated_SNPs_64142 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr11:57463486-57463512
64251 chr15 38591587 38591587 1 + C T HNSC 38591585 + 38591565 38591605 41 CTATTTTAGTAATAGTTATGCACGAGTGCGAGCTGTGGTGA CTATTTTAGTAATAGTTATGCATGAGTGCGAGCTGTGGTGA < 41bp 0.808163732219891 0.554578093432053 0.15850607 0.16492891 prediction 0.507171277575677 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591585 chr15:38591587 stopgain 1.000 1 23 hm5C_associated_SNPs_64143 1 0 2 DDX3X POSTAR2 ENCODE chr15:38591581-38591677
64251 chr7 65551821 65551821 1 + C T rs12536292 65551819 + 65551799 65551839 41 CCCTGGGGAGGTGGGTGAGGCTCCAGTGCCCCGAGGGCCTG CCCTGGGGAGGTGGGTGAGGCTTCAGTGCCCCGAGGGCCTG < 41bp 0.769594927783542 0.51601720086909 0.8940888 0.45427975 prediction 0.507155453828904 Functional Loss - ASL ENSG00000126522 intronic Human protein_coding chr7:65551819 chr7:65551821 . . 0 23 hm5C_associated_SNPs_64145 2 0 3 AKAP8L POSTAR2 ENCODE chr7:65551817-65551871
64251 chr12 124071422 124071422 1 + A T UCEC 124071418 + 124071398 124071438 41 TAACCGGATGTCCACCATGACTCCAAAAATAGTGATGTTCA TAACCGGATGTCCACCATGACTCCTAAAATAGTGATGTTCA < 41bp 0.753562033900714 0.396885529179713 0.9589765 0.02097696 prediction 0.507124067801428 Functional Loss - TMED2 ENSG00000086598 CDS Human protein_coding chr12:124071418 chr12:124071422 synonymous SNV . 0 25 hm5C_associated_SNPs_64148 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714641 chr12:124071293-124071427
64251 chr6 151670624 151670624 1 + C T STAD 151670622 + 151670602 151670642 41 AGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGCT AGGAGCCGGCAGAAAGTGCCCATGAGCCCCGGTTATCAGCT < 41bp 0.77507543594491 0.52153440852154 0.10132736 0.080244124 prediction 0.50708205484674 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670622 chr6:151670624 synonymous SNV . 0 23 hm5C_associated_SNPs_64152 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr6:151670613-151670631
64251 chrX 30237541 30237541 1 + G T ACC 30237539 + 30237519 30237559 41 GTGGGGTCCGAGAGCCTATGCTGAAACCAGCAAGATGAAAG GTGGGGTCCGAGAGCCTATGCTTAAACCAGCAAGATGAAAG < 41bp 0.753533051593626 0.420263285140951 0.31736487 0.2032617 prediction 0.507066103187251 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237539 chrX:30237541 stopgain 0.406 1 23 hm5C_associated_SNPs_64153 0 0 2 LIN28B POSTAR2 ENCODE chrX:30237494-30237556
64251 chr1 100366315 100366315 1 + G T LUSC 100366313 + 100366293 100366333 41 GGTGGTGGCTGCAGTGTATCCAGGATTACTGTAAAATGGTT GGTGGTGGCTGCAGTGTATCCATGATTACTGTAAAATGGTT < 41bp 0.862914118817559 0.609385847211866 0.49767664 0.16664702 prediction 0.507056543211385 Functional Loss - AGL ENSG00000162688 CDS Human protein_coding chr1:100366313 chr1:100366315 nonsynonymous SNV 0.988 3 23 hm5C_associated_SNPs_64157 0 0 1 ZNF622 POSTAR2 ENCODE chr1:100366256-100366330
64251 chr9 131482828 131482828 1 + C T UCEC 131482826 + 131482806 131482846 41 CCCACAGCCTCCTCACTGCCCGCCAACAGGCCGCCTTCCGG CCCACAGCCTCCTCACTGCCCGTCAACAGGCCGCCTTCCGG < 41bp 0.753516815533767 0.497017073947824 0.06936392 0.044860125 prediction 0.507033631067534 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131482826 chr9:131482828 synonymous SNV . 0 23 hm5C_associated_SNPs_64160 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131482802-131482922
64251 chr13 98086847 98086847 1 + C T LUSC 98086845 + 98086825 98086865 41 CCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGAT CCACCATCGAGGACTTCTACCGTAAGGAGATCGAGGTGGAT < 41bp 0.765650614247271 0.512136219100893 0.2677617 0.20500275 prediction 0.507028790292757 Functional Loss - RAP2A ENSG00000125249 CDS Human protein_coding chr13:98086845 chr13:98086847 synonymous SNV . 0 23 hm5C_associated_SNPs_64161 0 0 1 GRWD1 POSTAR2 ENCODE chr13:98086798-98087127
64251 chr20 61870935 61870935 1 + G C STAD 61870934 + 61870914 61870954 41 GCAGAGCCCCCGTCCGCAGCCGCGTGCGCACCTTCCTGTCC GCAGAGCCCCCGTCCGCAGCCCCGTGCGCACCTTCCTGTCC < 41bp 0.845884192589114 0.592375831632917 0.661935 0.16964218 prediction 0.507016721912395 Functional Loss - BIRC7 ENSG00000101197 CDS Human protein_coding chr20:61870934 chr20:61870935 nonsynonymous SNV 0.033 0 22 hm5C_associated_SNPs_64163 0 0 1 DDX55 POSTAR2 ENCODE chr20:61870878-61870947
64251 chr14 24620759 24620759 1 + C T rs111795824 24620757 + 24620737 24620777 41 CTCTCCAGGCATTGTTCCAGCACGGAGGTGATGTGTCACGG CTCTCCAGGCATTGTTCCAGCATGGAGGTGATGTGTCACGG < 41bp 0.773014088533899 0.519507744554176 0.8818617 0.83990526 prediction 0.507012687959446 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24620757 chr14:24620759 synonymous SNV . 0 23 hm5C_associated_SNPs_64164 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr14:24620756-24620783
64251 chr19 37210539 37210539 1 + G T UCEC 37210537 + 37210517 37210557 41 TGATCATCAGAGAACTCACACAGGAGAGAAACCCTTTGTTT TGATCATCAGAGAACTCACACATGAGAGAAACCCTTTGTTT < 41bp 0.871664911486127 0.618170997725283 0.89973927 0.3753921 prediction 0.506987827521687 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37210537 chr19:37210539 stopgain 0.611 0 23 hm5C_associated_SNPs_64166 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37210513-37210548
64251 chr7 5643549 5643549 1 + C T STAD 5643547 + 5643527 5643567 41 ACCGCCCCATCATCGTGTTCCGCGGGGAGCATGGCTTCATC ACCGCCCCATCATCGTGTTCCGTGGGGAGCATGGCTTCATC < 41bp 0.753489894601642 0.490135444675678 0.8779426 0.6682312 prediction 0.506979789203283 Functional Loss - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643547 chr7:5643549 synonymous SNV . 0 23 hm5C_associated_SNPs_64167 0 0 3 FMR1 POSTAR2 ENCODE chr7:5643540-5643609
64251 chr19 30935747 30935747 1 + G T LUSC 30935745 + 30935725 30935765 41 CCCAGGAGGCCCACGCCAACCTGTACTCCAGGTACCTCTCC CCCAGGAGGCCCACGCCAACCTTTACTCCAGGTACCTCTCC < 41bp 0.753473739896891 0.399861009632742 0.0674189 0.036902755 prediction 0.506947479793782 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935745 chr19:30935747 synonymous SNV . 0 23 hm5C_associated_SNPs_64174 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:30935744-30935782
64251 chr8 144732497 144732497 1 + C T UCEC 144732495 + 144732475 144732515 41 CATGCTGGGGAGAAACCTTACACGTGCGATCAGTGTGGGAA CATGCTGGGGAGAAACCTTACATGTGCGATCAGTGTGGGAA < 41bp 0.753472565062651 0.498879560803379 0.27527863 0.3231414 prediction 0.506945130125302 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732495 chr8:144732497 nonsynonymous SNV 0.590 0 23 hm5C_associated_SNPs_64175 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:144732473-144732504
64251 chr16 86602202 86602202 1 + G T COAD 86602199 + 86602179 86602219 41 AGCCCGGGGCCGCCGCGGCGCAGGCGGCCTCCTGGTATCTC AGCCCGGGGCCGCCGCGGCGCAGTCGGCCTCCTGGTATCTC < 41bp 0.753458610619039 0.378110104661779 0.8020417 0.3081107 prediction 0.506917221238077 Functional Loss - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86602199 chr16:86602202 nonsynonymous SNV 0.964 0 24 hm5C_associated_SNPs_64180 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:86602190-86602249
64251 chr1 33231403 33231403 1 + G C rs6702519 33231399 + 33231379 33231419 41 GTTCGTTGGCCGCCGCCTCCCGGCGCTCCTAGGGCTGTTTA GTTCGTTGGCCGCCGCCTCCCGGCCCTCCTAGGGCTGTTTA < 41bp 0.753429223265009 0.462544922120749 0.87995756 0.1931721 prediction 0.506858446530019 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33231399 chr1:33231403 synonymous SNV . 0 25 hm5C_associated_SNPs_64186 0 0 1 AARS POSTAR2 ENCODE chr1:33231384-33231425
64251 chr16 89788983 89788983 1 + G C LUAD 89788982 + 89788962 89789002 41 GGTCACTGTCGCCTCTGCCACGGGAAGTTTTCCTCGAGAAG GGTCACTGTCGCCTCTGCCACCGGAAGTTTTCCTCGAGAAG < 41bp 0.852014099139498 0.598594652855598 0.9258263 0.9074259 prediction 0.5068388925678 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89788982 chr16:89788983 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_64187 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:89788960-89789000
64251 chr1 24076373 24076373 1 + C T UCEC 24076371 + 24076351 24076391 41 CAGTAAATAGCTTGCGAAAACACGAGCATGTTGGAAGCTTT CAGTAAATAGCTTGCGAAAACATGAGCATGTTGGAAGCTTT < 41bp 0.819759337390519 0.566355150594428 0.35769397 0.32681978 prediction 0.506808373592182 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24076371 chr1:24076373 synonymous SNV . 0 23 hm5C_associated_SNPs_64189 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:24076351-24076377
64251 chr1 150315916 150315916 1 + C T SKCM 150315914 + 150315894 150315934 41 CAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGGTGCAT CAGGCTGGGCCTGATGCCTCCTTCAGAACCCAAAGGTGCAT < 41bp 0.753388198841594 0.453797062604088 0.9153675 0.021697849 prediction 0.506776397683188 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150315914 chr1:150315916 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_64192 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150315883-150315924
64251 chr11 11976640 11976640 1 + G T SARC 11976637 + 11976617 11976657 41 GATATTCATCAGGATTTAGACTGGAATCCTAAAGTTTCTAC GATATTCATCAGGATTTAGACTGTAATCCTAAAGTTTCTAC < 41bp 0.753377674386362 0.396248039076363 0.008077174 0.014382541 prediction 0.506755348772725 Functional Loss - USP47 ENSG00000170242 CDS Human protein_coding chr11:11976637 chr11:11976640 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_64194 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:11976619-11976653
64251 chr19 50157994 50157994 1 + C T SKCM 50157992 + 50157972 50158012 41 TTGGGTCTGCCCCCTGGCCCCTCCAGCTACCTGCTTCCTGG TTGGGTCTGCCCCCTGGCCCCTTCAGCTACCTGCTTCCTGG < 41bp 0.793097591850229 0.539726435212298 0.95854765 0.2519194 prediction 0.506742313275863 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50157992 chr19:50157994 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_64199 0 0 1 GRWD1 POSTAR2 ENCODE chr19:50157964-50158009
64251 chr6 107854764 107854764 1 + A T LUSC 107854760 + 107854740 107854780 41 GGAAGTGAGGTGAAAAGCTTCTGCAGCGAGAAGTGCTTTGC GGAAGTGAGGTGAAAAGCTTCTGCTGCGAGAAGTGCTTTGC < 41bp 0.753368177039421 0.410894011075705 0.40691385 0.2794494 prediction 0.506736354078842 Functional Loss - SOBP ENSG00000112320 CDS Human protein_coding chr6:107854760 chr6:107854764 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_64201 0 0 1 PPIG POSTAR2 ENCODE chr6:107854759-107854822
64251 chr14 75469779 75469779 1 + G C LIHC 75469778 + 75469758 75469798 41 TGAAGCGGGGTGGTGGGCCGCGCAGCTCCGAGGAAATGGCT TGAAGCGGGGTGGTGGGCCGCCCAGCTCCGAGGAAATGGCT < 41bp 0.753368070855796 0.442304387171099 0.33006477 0.23495868 prediction 0.506736141711592 Functional Loss - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75469778 chr14:75469779 nonsynonymous SNV 0.498 2 22 hm5C_associated_SNPs_64202 0 0 1 DDX3X POSTAR2 ENCODE chr14:75469652-75469784
64251 chr19 57839444 57839444 1 + G T LUSC 57839442 + 57839422 57839462 41 TCCTATAAATGTGAGGAATGCGGGAAAGTGTTTAAAAAGAA TCCTATAAATGTGAGGAATGCGTGAAAGTGTTTAAAAAGAA < 41bp 0.866544575156767 0.613176658410507 0.32260185 0.06708035 prediction 0.506735833492521 Functional Loss - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57839442 chr19:57839444 nonsynonymous SNV 0.036 3 23 hm5C_associated_SNPs_64203 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:57839437-57839460
64251 chrX 105905286 105905286 1 + A T UCEC 105905282 + 105905262 105905302 41 GCTAATCTGCAAGGGAAAGCCAGAAAAACTATAAGTGATAG GCTAATCTGCAAGGGAAAGCCAGATAAACTATAAGTGATAG < 41bp 0.753358749197481 0.444294856230737 0.9203664 0.724769 prediction 0.506717498394961 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105905282 chrX:105905286 stopgain 0.612 0 25 hm5C_associated_SNPs_64204 0 0 2 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chrX:105905280-105905300
64251 chr10 12131171 12131171 1 + C T LIHC 12131169 + 12131149 12131189 41 CCCCGTGGCCGTGGGCAAAACTCGCGGCAGGCAGCAGTCTC CCCCGTGGCCGTGGGCAAAACTTGCGGCAGGCAGCAGTCTC < 41bp 0.81480173007947 0.561446103511049 0.40363735 0.15386108 prediction 0.506711253136842 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131169 chr10:12131171 nonsynonymous SNV 0.945 4 23 hm5C_associated_SNPs_64207 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:12131170-12131171
64251 chrX 147026500 147026500 1 + G C LUSC 147026496 + 147026476 147026516 41 AAGAGAGGGAGAGCTTCCTGCGCAGAGGAGACGGACGGCGG AAGAGAGGGAGAGCTTCCTGCGCACAGGAGACGGACGGCGG < 41bp 0.803615047621927 0.55025982697568 0.30006188 0.121825784 prediction 0.506710441292493 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147026496 chrX:147026500 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_64208 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147026386-147026525
64251 chr7 87564431 87564431 1 + C T HNSC 87564429 + 87564409 87564449 41 CCACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAG CCACTGCGCCTCATCTACCGCTTGGGCGGCGAAGACGAAAG < 41bp 0.753343383058923 0.498698624663794 0.038284093 0.08019766 prediction 0.506686766117846 Functional Loss - ADAM22 ENSG00000008277 CDS Human protein_coding chr7:87564429 chr7:87564431 nonsynonymous SNV 0.300 0 23 hm5C_associated_SNPs_64210 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:87564402-87564432
64251 chrX 100667970 100667970 1 + G T LIHC 100667968 + 100667948 100667988 41 TGGCAGAGTTACCGGTGAGGCAGATGTTGAATTTGCTACTC TGGCAGAGTTACCGGTGAGGCATATGTTGAATTTGCTACTC < 41bp 0.753339021169699 0.43681880995805 0.46567082 0.2076875 prediction 0.506678042339397 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667968 chrX:100667970 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64211 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:100667922-100667970
64251 chr1 109238366 109238366 1 + G T SARC 109238364 + 109238344 109238384 41 GGAGAAAGGAAGCAGGAAAACAGCGGGCCAGACAGGGATGT GGAGAAAGGAAGCAGGAAAACATCGGGCCAGACAGGGATGT < 41bp 0.844289749040911 0.590957214613091 0.3739137 0.24903354 prediction 0.50666506885564 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109238364 chr1:109238366 nonsynonymous SNV 0.880 1 23 hm5C_associated_SNPs_64212 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:109238330-109238368
64251 chr10 89264991 89264991 1 + G T PAAD 89264988 + 89264968 89265008 41 TCCGCAAGCTGAGGCAGCTGCACGGGTTGCTGCAGGCCCGC TCCGCAAGCTGAGGCAGCTGCACTGGTTGCTGCAGGCCCGC < 41bp 0.918115249286814 0.664795585426022 0.6446065 0.26642027 prediction 0.506639327721583 Functional Loss - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89264988 chr10:89264991 nonsynonymous SNV 0.086 4 24 hm5C_associated_SNPs_64214 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr10:89264964-89265011
64251 chr16 90030592 90030592 1 + G T CESC 90030590 + 90030570 90030610 41 CTTGGCAGCTCCAGGATCGGCAGCATTTTGTGGAGAACGAC CTTGGCAGCTCCAGGATCGGCATCATTTTGTGGAGAACGAC < 41bp 0.75329997788484 0.418230880316255 0.30814326 0.24963942 prediction 0.506599955769681 Functional Loss - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90030590 chr16:90030592 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_64216 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:90030583-90030599
64251 chr1 9656970 9656970 1 + C T UCEC 9656968 + 9656948 9656988 41 AGTACTTGGAGCACCTGAACCACGTGGTGAGCAGCGCGCCC AGTACTTGGAGCACCTGAACCATGTGGTGAGCAGCGCGCCC < 41bp 0.753286463044169 0.497350758505393 0.86486584 0.88707626 prediction 0.506572926088338 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9656968 chr1:9656970 synonymous SNV . 0 23 hm5C_associated_SNPs_64221 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:9656932-9656973
64251 chrX 30738208 30738208 1 + G C LUSC 30738207 + 30738187 30738227 41 AAGCTGTTTGTTTCCAAACTCGAGAGGTAACAAATATGGGC AAGCTGTTTGTTTCCAAACTCCAGAGGTAACAAATATGGGC < 41bp 0.753275968088045 0.454929138054047 0.92434514 0.8737371 prediction 0.50655193617609 Functional Loss - GK ENSG00000198814 CDS Human protein_coding chrX:30738207 chrX:30738208 nonsynonymous SNV 0.994 5 22 hm5C_associated_SNPs_64225 0 0 3 PPIG POSTAR2 ENCODE chrX:30738176-30738213
64251 chr4 110754369 110754369 1 + A C UCEC 110754365 + 110754345 110754385 41 TACAAGGAACTTCGGACACCCACAAATGCAATTATTATTAA TACAAGGAACTTCGGACACCCACACATGCAATTATTATTAA < 41bp 0.753270688256703 0.338290308485723 0.16186228 0.0059925616 prediction 0.506541376513407 Functional Loss - RRH ENSG00000180245 CDS Human protein_coding chr4:110754365 chr4:110754369 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_64227 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:110754319-110754383
64251 chr4 1730122 1730122 1 + G C CESC 1730121 + 1730101 1730141 41 AGGCCAAATGGCCAGCTCCTCGAGGAGCGGACCTGTAAAAC AGGCCAAATGGCCAGCTCCTCCAGGAGCGGACCTGTAAAAC < 41bp 0.753267130805877 0.437735371469311 0.90563583 0.6801104 prediction 0.506534261611753 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730121 chr4:1730122 synonymous SNV . 0 22 hm5C_associated_SNPs_64228 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr4:1730090-1730122
64251 chr6 74210321 74210321 1 + G T LUSC 74210319 + 74210299 74210339 41 CGGGGCTGCTAGTCGCATACCCGGAGTAACACCTGCCGCCA CGGGGCTGCTAGTCGCATACCCTGAGTAACACCTGCCGCCA < 41bp 0.871436252119816 0.618169599444157 0.9121828 0.10165578 prediction 0.506533305351318 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74210319 chr6:74210321 stopgain 0.997 1 23 hm5C_associated_SNPs_64229 0 0 1 GRWD1 POSTAR2 ENCODE chr6:74210293-74210356
64251 chr8 22429908 22429908 1 + G C COAD 22429907 + 22429887 22429927 41 GAAGACGAGCTGGAGCTGCGCGAGGGGGACAGGGTGGATGT GAAGACGAGCTGGAGCTGCGCCAGGGGGACAGGGTGGATGT < 41bp 0.84814842835236 0.594891043198179 0.89098984 0.84377265 prediction 0.506514770308363 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22429907 chr8:22429908 nonsynonymous SNV 0.606 2 22 hm5C_associated_SNPs_64230 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22429906-22429931
64251 chr16 67902441 67902441 1 + C T BRCA 67902439 + 67902419 67902459 41 AAAATTCAGCACAGCATCACCGCGCAGGACCATCAGCCCAC AAAATTCAGCACAGCATCACCGTGCAGGACCATCAGCCCAC < 41bp 0.792521740938504 0.539264383756359 0.048690915 0.038517207 prediction 0.50651471436429 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67902439 chr16:67902441 nonsynonymous SNV 0.785 1 23 hm5C_associated_SNPs_64231 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:67902400-67902460
64251 chr7 30411222 30411222 1 + G C rs189447786 30411218 + 30411198 30411238 41 CTGTCCAAGATTGAAGAACTCCAGGGTCAACTGCAATATAA CTGTCCAAGATTGAAGAACTCCAGCGTCAACTGCAATATAA < 41bp 0.753248832363025 0.486062565248651 0.7647152 0.22516924 prediction 0.506497664726049 Functional Loss - DKFZP586I1420 ENSG00000235859 ncRNA_exonic Human processed_pseudogene chr7:30411218 chr7:30411222 . . 0 25 hm5C_associated_SNPs_64235 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:30411196-30411254
64251 chr11 582068 582068 1 + G T SARC 582066 + 582046 582086 41 GGGCGTCTGAGGAGGAAGACCTGGAAGACAGATCTGGTGAG GGGCGTCTGAGGAGGAAGACCTTGAAGACAGATCTGGTGAG < 41bp 0.869915082040254 0.616667408596282 0.7862823 0.3849569 prediction 0.506495346887945 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:582066 chr11:582068 synonymous SNV . 0 23 hm5C_associated_SNPs_64236 0 0 8 BUD13 POSTAR2 ENCODE chr11:581998-582089
64251 chr7 120629922 120629922 1 + A T UCEC 120629918 + 120629898 120629938 41 TCTGGTAATGCCCAGGAAACCAGAAAGGTAAGACTCTCATA TCTGGTAATGCCCAGGAAACCAGATAGGTAAGACTCTCATA < 41bp 0.811486152044707 0.558239114981578 0.41060412 0.34300506 prediction 0.506494074126259 Functional Loss - CPED1 ENSG00000106034 CDS Human protein_coding chr7:120629918 chr7:120629922 stopgain 0.926 1 25 hm5C_associated_SNPs_64237 0 0 2 IGF2BP1 POSTAR2 ENCODE chr7:120629876-120629924
64251 chr3 49050036 49050036 1 + G T ACC 49050033 + 49050013 49050053 41 GTACACTCAAGGCTGTGACTCTGGCTGGCTCTTGGCGACTG GTACACTCAAGGCTGTGACTCTGTCTGGCTCTTGGCGACTG < 41bp 0.753239872705957 0.350515290401577 0.55381113 0.21061411 prediction 0.506479745411915 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050033 chr3:49050036 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_64239 0 0 41 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49049960-49050040
64251 chr6 33654203 33654203 1 + C T rs145776727 33654201 + 33654181 33654221 41 GCCAGACTTGCATTGTGACTCACGAGTCCAATGGCATAGAC GCCAGACTTGCATTGTGACTCATGAGTCCAATGGCATAGAC < 41bp 0.764940893280713 0.511713645064063 0.10219121 0.056111783 prediction 0.506454496433301 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33654201 chr6:33654203 synonymous SNV . 0 23 hm5C_associated_SNPs_64242 0 0 1 YBX3 POSTAR2 ENCODE chr6:33654199-33654272
64251 chr1 220871985 220871985 1 + G C rs143875364 220871984 + 220871964 220872004 41 CAGGCAGCCCACAAGTTTCTCGTGGGGAGATGGAGGCAGAG CAGGCAGCCCACAAGTTTCTCCTGGGGAGATGGAGGCAGAG < 41bp 0.760075420153338 0.50686664100102 0.8992424 0.5619394 prediction 0.506417558304636 Functional Loss - C1orf115 ENSG00000162817 UTR3 Human protein_coding chr1:220871984 chr1:220871985 . . 0 22 hm5C_associated_SNPs_64250 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:220871960-220871985
64251 chr11 63884374 63884374 1 + C T UCEC 63884372 + 63884352 63884392 41 CTGGATGACAACCGCATCTCCACCATCCCGCTGCATGCCTT CTGGATGACAACCGCATCTCCATCATCCCGCTGCATGCCTT < 41bp 0.802694721777516 0.54950147157782 0.07084739 0.021672308 prediction 0.506386500399392 Functional Loss - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63884372 chr11:63884374 nonsynonymous SNV 0.986 1 23 hm5C_associated_SNPs_64254 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:63884333-63884385
64251 chr12 102569424 102569424 1 + A C CESC 102569420 + 102569400 102569440 41 GAAGGTGTTGTAGCTCTTAGCACCACTGACATCAGTCCTGC GAAGGTGTTGTAGCTCTTAGCACCCCTGACATCAGTCCTGC < 41bp 0.753191538335508 0.364868300675671 0.16967183 0.113776535 prediction 0.506383076671016 Functional Loss - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102569420 chr12:102569424 nonsynonymous SNV 0.959 0 25 hm5C_associated_SNPs_64255 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:102569390-102569429
64251 chr20 45353855 45353855 1 + C T UCEC 45353853 + 45353833 45353873 41 GCCTGCTCCTGGGGGCTCTCCTCGCCTCCCTGGTTGGTGGC GCCTGCTCCTGGGGGCTCTCCTTGCCTCCCTGGTTGGTGGC < 41bp 0.753187316892465 0.473510775070815 0.90211546 0.22944087 prediction 0.50637463378493 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353853 chr20:45353855 synonymous SNV . 0 23 hm5C_associated_SNPs_64258 0 0 2 DDX3X POSTAR2 ENCODE chr20:45353786-45353889
64251 chr15 58834792 58834792 1 + C T UCEC 58834790 + 58834770 58834810 41 TTGGGTACAGCCTGGGTGCACACGTGTCAGGATTTGCCGGC TTGGGTACAGCCTGGGTGCACATGTGTCAGGATTTGCCGGC < 41bp 0.793991362850605 0.540810142379837 0.23187071 0.16450697 prediction 0.506362440941536 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58834790 chr15:58834792 synonymous SNV . 0 23 hm5C_associated_SNPs_64261 0 0 2 SND1 POSTAR2 ENCODE chr15:58834772-58834838
64251 chr2 54365782 54365782 1 + G T STAD 54365780 + 54365760 54365800 41 TTTTTTCCTGAAACAGTATACAGAAGATGAAGCTAGGAAAA TTTTTTCCTGAAACAGTATACATAAGATGAAGCTAGGAAAA < 41bp 0.75317447574849 0.430212344996601 0.6569998 0.32559156 prediction 0.50634895149698 Functional Loss - ACYP2 ENSG00000170634 CDS Human protein_coding chr2:54365780 chr2:54365782 stopgain 0.941 1 23 hm5C_associated_SNPs_64262 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:54365777-54365820
64251 chr6 13977387 13977387 1 + C T OV 13977385 + 13977365 13977405 41 TCCTGAAGACACTGCGGAGTCTCAGGCCTCTGATGAGCTGG TCCTGAAGACACTGCGGAGTCTTAGGCCTCTGATGAGCTGG < 41bp 0.770207664292008 0.517036441946677 0.11728105 0.1605241 prediction 0.506342444690663 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977385 chr6:13977387 stopgain 0.788 0 23 hm5C_associated_SNPs_64263 0 0 2 YBX3 POSTAR2 ENCODE chr6:13977353-13977410
64251 chr15 80465390 80465390 1 + C T BLCA 80465388 + 80465368 80465408 41 AGAAGTGGGAGTATGTCCCTCTCGGGCCATTCCTTGGGAAG AGAAGTGGGAGTATGTCCCTCTTGGGCCATTCCTTGGGAAG < 41bp 0.753161051897918 0.478798561167891 0.5119508 0.3889482 prediction 0.506322103795837 Functional Loss - FAH ENSG00000103876 CDS Human protein_coding chr15:80465388 chr15:80465390 synonymous SNV . 0 23 hm5C_associated_SNPs_64269 0 0 2 BUD13 POSTAR2 ENCODE chr15:80465293-80465393
64251 chr9 36211770 36211770 1 + G T CESC 36211768 + 36211748 36211788 41 AAGCAGGCCCCGCTGGTGCACTGAAGAGCCACCCTGTGGAA AAGCAGGCCCCGCTGGTGCACTTAAGAGCCACCCTGTGGAA < 41bp 0.871712278835626 0.618574576614443 0.2798037 0.12909025 prediction 0.506275404442367 Functional Loss - CLTA ENSG00000122705 CDS Human protein_coding chr9:36211768 chr9:36211770 stoploss 1.000 0 23 hm5C_associated_SNPs_64277 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:36211751-36211804
64251 chr19 46177957 46177957 1 + G T UCEC 46177954 + 46177934 46177974 41 CCCTAGGCGGCTACATTGCACTAGAAACTATATCCACATCA CCCTAGGCGGCTACATTGCACTATAAACTATATCCACATCA < 41bp 0.753137574735782 0.356768094084045 0.028107852 0.012956768 prediction 0.506275149471564 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46177954 chr19:46177957 nonsynonymous SNV 0.945 4 24 hm5C_associated_SNPs_64278 0 0 1 UCHL5 POSTAR2 ENCODE chr19:46177954-46178010
64251 chr11 64854471 64854471 1 + C T SKCM 64854469 + 64854449 64854489 41 AGCCTTCTACAGCCAGGCCCCCCGGCCCCCAGCTTCCCCAG AGCCTTCTACAGCCAGGCCCCCTGGCCCCCAGCTTCCCCAG < 41bp 0.753135250554837 0.497347228104961 0.5358523 0.23062912 prediction 0.506270501109674 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854469 chr11:64854471 nonsynonymous SNV 0.024 2 23 hm5C_associated_SNPs_64279 0 0 1 RPS3 POSTAR2 ENCODE chr11:64854439-64854485
64251 chr7 114298221 114298221 1 + C T UCEC 114298219 + 114298199 114298239 41 ACACCAACGGCCCCAGTCACCCCGATTACCCAGGGACCCTC ACACCAACGGCCCCAGTCACCCTGATTACCCAGGGACCCTC < 41bp 0.75853703812474 0.505404009933728 0.029961705 0.022992134 prediction 0.506266056382026 Functional Loss - FOXP2 ENSG00000128573 CDS Human protein_coding chr7:114298219 chr7:114298221 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_64280 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr7:114298220-114298240
64251 chr18 21396406 21396406 1 + G T BLCA 21396403 + 21396383 21396423 41 CTCCATGTGCAGTGGGCCCTCGGGAGTGTGCCAGTGCCGAG CTCCATGTGCAGTGGGCCCTCGGTAGTGTGCCAGTGCCGAG < 41bp 0.885804991247549 0.632690019916061 0.9048327 0.2248877 prediction 0.506229942662974 Functional Loss - LAMA3 ENSG00000053747 CDS Human protein_coding chr18:21396403 chr18:21396406 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_64283 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:21396392-21396430
64251 chr13 50018738 50018738 1 + G C rs114928480 50018737 + 50018717 50018757 41 CCGCGGAGCCCTCGGCCGCCCGAGCAGGGGCTGGACCCCAG CCGCGGAGCCCTCGGCCGCCCCAGCAGGGGCTGGACCCCAG < 41bp 0.753110966900002 0.471926027719801 0.86207247 0.41397944 prediction 0.506221933800003 Functional Loss - SETDB2;SETDB2-PHF11 ENSG00000136169 UTR5 Human protein_coding chr13:50018737 chr13:50018738 . . 0 22 hm5C_associated_SNPs_64284 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr13:50018725-50018749
64251 chrX 105970199 105970199 1 + G T STAD 105970196 + 105970176 105970216 41 CCGCGGTGGCTGCGGCTTTTCCAGATTGCTGGCATGGTGCT CCGCGGTGGCTGCGGCTTTTCCATATTGCTGGCATGGTGCT < 41bp 0.907231985348374 0.654121736425397 0.7770144 0.21320873 prediction 0.506220497845954 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970196 chrX:105970199 nonsynonymous SNV 0.508 0 24 hm5C_associated_SNPs_64285 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chrX:105970172-105970214
64251 chr9 117405501 117405501 1 + C T STAD 117405499 + 117405479 117405519 41 GCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGA GCTCCCTCAGGCAATGGGGACATGACACACGAACTCTCCGA < 41bp 0.772202861569647 0.519107773068869 0.2641312 0.35814998 prediction 0.506190177001555 Functional Loss - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117405499 chr9:117405501 stopgain 0.519 0 23 hm5C_associated_SNPs_64289 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:117405448-117405517
64251 chr1 26878169 26878169 1 + G T LUSC 26878167 + 26878147 26878187 41 AGGGCAAGCTCTATCTCATTCTGGACTTCCTGCGTGGTGGG AGGGCAAGCTCTATCTCATTCTTGACTTCCTGCGTGGTGGG < 41bp 0.887863640706765 0.634768973344074 0.37541166 0.10978791 prediction 0.506189334725381 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26878167 chr1:26878169 synonymous SNV . 0 23 hm5C_associated_SNPs_64290 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:26878154-26878178
64251 chr1 26152864 26152864 1 + G T UCEC 26152861 + 26152841 26152881 41 CCTACCCTGGCTGACATCGCCTGGATTGCTGCGGATGAAGA CCTACCCTGGCTGACATCGCCTGTATTGCTGCGGATGAAGA < 41bp 0.851555909963448 0.598472596463625 0.33500656 0.10864073 prediction 0.506166626999645 Functional Loss - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26152861 chr1:26152864 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_64291 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:26152838-26152868
64251 chrX 136649760 136649760 1 + C T COAD 136649758 + 136649738 136649778 41 CTGCTACTGGGAGGAGTGCCCCCGGGAGGGCAAGTCTTTCA CTGCTACTGGGAGGAGTGCCCCTGGGAGGGCAAGTCTTTCA < 41bp 0.757453951540177 0.50437495200503 0.3251424 0.39374775 prediction 0.506157999070294 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649758 chrX:136649760 nonsynonymous SNV 0.993 5 23 hm5C_associated_SNPs_64293 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:136649760-136649780
64251 chr1 151263661 151263661 1 + G T SARC 151263659 + 151263639 151263679 41 GCATGGCGTTCATCAGGGCTCGGCAGGGGGCTGTTGGGGAC GCATGGCGTTCATCAGGGCTCGTCAGGGGGCTGTTGGGGAC < 41bp 0.869556610585527 0.616481823913198 0.8766266 0.74468726 prediction 0.506149573344658 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263659 chr1:151263661 synonymous SNV . 0 23 hm5C_associated_SNPs_64294 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151263630-151263671
64251 chr11 65835515 65835515 1 + C T LUSC 65835513 + 65835493 65835533 41 ACCCACATTTATGACATGTCCACGGTGAGTACTTGGAGGAT ACCCACATTTATGACATGTCCATGGTGAGTACTTGGAGGAT < 41bp 0.753071089764975 0.487300543824898 0.036758035 0.046400666 prediction 0.506142179529951 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65835513 chr11:65835515 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_64296 0 0 19 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65835483-65835517
64251 chr11 2411680 2411680 1 + C T HNSC 2411678 + 2411658 2411698 41 TCCTGGGTGTGGCCCTGTGGCTCCGCCATGACCCGCAGACC TCCTGGGTGTGGCCCTGTGGCTTCGCCATGACCCGCAGACC < 41bp 0.753050431937387 0.488607866764692 0.22533837 0.14377674 prediction 0.506100863874774 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2411678 chr11:2411680 synonymous SNV . 0 23 hm5C_associated_SNPs_64298 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chr11:2411654-2411684
64251 chr18 29125986 29125986 1 + G C LUAD 29125982 + 29125962 29126002 41 TGAGCAAACTATGGTTAATTCAGAGAATACCTACTCCTCTG TGAGCAAACTATGGTTAATTCAGACAATACCTACTCCTCTG < 41bp 0.753049689438511 0.469940005080115 0.31197962 0.07237831 prediction 0.506099378877022 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29125982 chr18:29125986 nonsynonymous SNV 0.016 0 25 hm5C_associated_SNPs_64299 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr18:29125966-29126002
64251 chr16 67916009 67916009 1 + C T SKCM 67916007 + 67915987 67916027 41 TGAGATCAAGAAGACAGTCCCTCCATGTGAGTTTTGCATGC TGAGATCAAGAAGACAGTCCCTTCATGTGAGTTTTGCATGC < 41bp 0.753049048683973 0.466277328946938 0.966082 0.12061167 prediction 0.506098097367946 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67916007 chr16:67916009 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_64300 0 0 4 PPIG POSTAR2 ENCODE chr16:67915960-67916010
64251 chr8 118540982 118540982 1 + G T CESC 118540979 + 118540959 118540999 41 CGCCAACTTTCAGTTCTCTTCAGGAAGCTGAGATTGGTATA CGCCAACTTTCAGTTCTCTTCAGTAAGCTGAGATTGGTATA < 41bp 0.90868663041782 0.65563998898212 0.31558597 0.10577685 prediction 0.5060932828714 Functional Loss - MED30 ENSG00000164758 CDS Human protein_coding chr8:118540979 chr8:118540982 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_64302 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:118540950-118540995
64251 chr19 13867062 13867062 1 + C T UCEC 13867060 + 13867040 13867080 41 CCACCCGCTTCGGGAGCGGGCTCGGAAGCTGTCACAGGGCA CCACCCGCTTCGGGAGCGGGCTTGGAAGCTGTCACAGGGCA < 41bp 0.753042513117314 0.48897591469966 0.17742568 0.13946682 prediction 0.506085026234628 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13867060 chr19:13867062 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64304 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:13867039-13867063
64251 chr2 220047026 220047026 1 + A C rs140249719 220047022 + 220047002 220047042 41 GACCAGTGGAGACACTGAGCCCCGAGACAGTGAGTGGTGGC GACCAGTGGAGACACTGAGCCCCGCGACAGTGAGTGGTGGC < 41bp 0.753031449142187 0.346623215804278 0.24615654 0.17800084 prediction 0.506062898284374 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220047022 chr2:220047026 nonsynonymous SNV 0.791 1 25 hm5C_associated_SNPs_64309 0 0 1 RPS3 POSTAR2 ENCODE chr2:220046989-220047038
64251 chr8 145735014 145735014 1 + G C rs534171481 145735010 + 145734990 145735030 41 GCTGGCCAGGCCGGGCTGCCCGCCGCTGTGGCGGGGTTGCT GCTGGCCAGGCCGGGCTGCCCGCCCCTGTGGCGGGGTTGCT < 41bp 0.807462580093306 0.554433334734424 0.021687567 0.010210782 prediction 0.506058490717763 Functional Loss - MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145735010 chr8:145735014 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_64310 0 0 1 ZRANB2 POSTAR2 ENCODE chr8:145734943-145735019
64251 chr5 7875450 7875450 1 + G T LUAD 7875448 + 7875428 7875468 41 GACTTCAAGAGCTTGGAGCCCGGCATTTCTATGACACTGGA GACTTCAAGAGCTTGGAGCCCGTCATTTCTATGACACTGGA < 41bp 0.871704939912212 0.618678567722043 0.16310084 0.027127355 prediction 0.506052744380338 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7875448 chr5:7875450 synonymous SNV . 0 23 hm5C_associated_SNPs_64311 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:7875420-7875454
64251 chr12 117290473 117290473 1 + A C UCEC 117290472 + 117290452 117290492 41 CAGATGCTGTTGAAGGGGCACAAGAAATTGGAGCTGGAGAA CAGATGCTGTTGAAGGGGCACCAGAAATTGGAGCTGGAGAA < 41bp 0.753023176265655 0.496263128685917 0.21025413 0.13188702 prediction 0.506046352531309 Functional Loss - RNFT2 ENSG00000135119 CDS Human protein_coding chr12:117290472 chr12:117290473 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_64314 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:117290463-117290493
64251 chr18 12014356 12014356 1 + G T LUSC 12014353 + 12014333 12014373 41 TTCTGCAATGGCCAGCGGCTCCGGGTCTCCGGGGAGACAGG TTCTGCAATGGCCAGCGGCTCCGTGTCTCCGGGGAGACAGG < 41bp 0.753015412913134 0.347280175253417 0.8906966 0.048534006 prediction 0.506030825826267 Functional Loss - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12014353 chr18:12014356 synonymous SNV . 0 24 hm5C_associated_SNPs_64316 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr18:12014339-12014368
64251 chr15 41857299 41857299 1 + G T LUAD 41857296 + 41857276 41857316 41 CGCTAGTGTGGCCTGGATGCCAGGTGCTGATGGCCGAGCTC CGCTAGTGTGGCCTGGATGCCAGTTGCTGATGGCCGAGCTC < 41bp 0.753012033716745 0.339062377377441 0.8164103 0.12869191 prediction 0.506024067433489 Functional Loss - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41857296 chr15:41857299 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_64318 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41857277-41857329
64251 chr18 29126191 29126191 1 + C T UCEC 29126189 + 29126169 29126209 41 TGTCACAGGGTCCACTATGCCACCAACCACTGTGATCCTGG TGTCACAGGGTCCACTATGCCATCAACCACTGTGATCCTGG < 41bp 0.753003979154477 0.473662266927151 0.11856523 0.06600806 prediction 0.506007958308955 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29126189 chr18:29126191 nonsynonymous SNV 0.845 0 23 hm5C_associated_SNPs_64321 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr18:29126191-29126192
64251 chr1 116932328 116932328 1 + C T COAD 116932326 + 116932306 116932346 41 GAAGGTTTGCTGGCCACTGTCACGGTAAGAGGCAGGTGATG GAAGGTTTGCTGGCCACTGTCATGGTAAGAGGCAGGTGATG < 41bp 0.770722423790665 0.517730980164136 0.80408007 0.8967782 prediction 0.50598288725306 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116932326 chr1:116932328 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_64323 0 0 10 IGF2BP1 POSTAR2 ENCODE chr1:116932306-116932329
64251 chr16 77228906 77228906 1 + G T LUSC 77228903 + 77228883 77228923 41 CCCTTGGTGCCATGCGTGCCCTTGGGGAGGCTGCCAGCTTC CCCTTGGTGCCATGCGTGCCCTTTGGGAGGCTGCCAGCTTC < 41bp 0.752973786775797 0.35583452096022 0.28469253 0.16893694 prediction 0.505947573551594 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228903 chr16:77228906 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_64326 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77228870-77228915
64251 chr1 15753677 15753677 1 + G T LUSC 15753675 + 15753655 15753695 41 ATCTTCCGCAAGGCGGCGGCCGGGGAGCTTCAGGAGGACAG ATCTTCCGCAAGGCGGCGGCCGTGGAGCTTCAGGAGGACAG < 41bp 0.888750048353542 0.635781867627672 0.9133066 0.48105958 prediction 0.505936361451741 Functional Loss - EFHD2 ENSG00000142634 CDS Human protein_coding chr1:15753675 chr1:15753677 nonsynonymous SNV 0.672 3 23 hm5C_associated_SNPs_64328 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:15753655-15753695
64251 chr7 134849577 134849577 1 + A C rs2288237 134849576 + 134849556 134849596 41 TGTGTCCTCTGTGCTGCTGGCAGGCGGCCTGGGCCTCTTCC TGTGTCCTCTGTGCTGCTGGCCGGCGGCCTGGGCCTCTTCC < 41bp 0.752964536676785 0.495541624450058 0.8981189 0.8237313 prediction 0.50592907335357 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849576 chr7:134849577 synonymous SNV . 0 22 hm5C_associated_SNPs_64330 0 0 1 SND1 POSTAR2 ENCODE chr7:134849517-134849680
64251 chr16 53504378 53504378 1 + A T LUSC 53504374 + 53504354 53504394 41 CAGGCACAAGCTGTGACAGGCTCCATCCAGCCCCTCAGTGC CAGGCACAAGCTGTGACAGGCTCCTTCCAGCCCCTCAGTGC < 41bp 0.752948841005175 0.401377243788257 0.8448528 0.09110671 prediction 0.50589768201035 Functional Loss - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53504374 chr16:53504378 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_64335 0 0 3 GRWD1 POSTAR2 ENCODE chr16:53504308-53504410
64251 chr1 32690050 32690050 1 + G T SARC 32690048 + 32690028 32690068 41 CTCACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGACTG CTCACTGGCTCAGCTGACAACATCTGTCGTCTCTGGGACTG < 41bp 0.75294699628158 0.422837259686073 0.35676292 0.092094034 prediction 0.50589399256316 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32690048 chr1:32690050 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_64336 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:32690020-32690058
64251 chr10 104572451 104572451 1 + A T STAD 104572447 + 104572427 104572467 41 GTGCCTTCCAGCTACAGCAGCAGCAGCTGCTGCCTCCACAG GTGCCTTCCAGCTACAGCAGCAGCTGCTGCTGCCTCCACAG < 41bp 0.752899654031701 0.439370420544485 0.17289758 0.3411811 prediction 0.505799308063401 Functional Loss - WBP1L ENSG00000166272 CDS Human protein_coding chr10:104572447 chr10:104572451 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_64350 0 0 1 IGF2BP1 POSTAR2 ENCODE chr10:104572382-104572571
64251 chr14 102368210 102368210 1 + C T SKCM 102368208 + 102368188 102368228 41 CGGCAGTTGGCCAAATGTGTCTCCAGCCCACACTTCCAGGT CGGCAGTTGGCCAAATGTGTCTTCAGCCCACACTTCCAGGT < 41bp 0.834102237546384 0.581226164379401 0.92534524 0.10315171 prediction 0.505752146333965 Functional Loss - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102368208 chr14:102368210 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_64356 0 0 2 IGF2BP2 POSTAR2 ENCODE chr14:102368198-102368220
64251 chr18 9257705 9257705 1 + G T LUSC 9257703 + 9257683 9257723 41 TGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATG TGCCAGGAAACTCTTGTGCTCATGATCCGGCATCCTTTATG < 41bp 0.752862921830168 0.431113747674969 0.91726017 0.18254486 prediction 0.505725843660337 Functional Loss - ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9257703 chr18:9257705 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_64360 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr18:9257700-9257724
64251 chr18 9257706 9257706 1 + G T LUSC 9257703 + 9257683 9257723 41 TGCCAGGAAACTCTTGTGCTCAGGATCCGGCATCCTTTATG TGCCAGGAAACTCTTGTGCTCAGTATCCGGCATCCTTTATG < 41bp 0.752862921830168 0.386178547894536 0.91726017 0.11032331 prediction 0.505725843660337 Functional Loss - ANKRD12 ENSG00000101745 CDS Human protein_coding chr18:9257703 chr18:9257706 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_64361 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr18:9257700-9257724
64251 chr13 113882348 113882348 1 + T C UCEC 113882347 + 113882327 113882367 41 AACACGTGCTGGCAGGACCACTGCAGACAAATGGTAAGCTT AACACGTGCTGGCAGGACCACCGCAGACAAATGGTAAGCTT < 41bp 0.755737854886766 0.502882603156025 0.33311325 0.09790522 prediction 0.505710503461481 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113882347 chr13:113882348 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_64362 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:113882310-113882360
64251 chr15 99465488 99465488 1 + G T UCEC 99465486 + 99465466 99465506 41 ACATCACCGACCCGGAAGAGCTGGAGACAGAGTACCCTTTC ACATCACCGACCCGGAAGAGCTTGAGACAGAGTACCCTTTC < 41bp 0.752850116187397 0.416487337994814 0.16728002 0.03576514 prediction 0.505700232374795 Functional Loss - IGF1R ENSG00000140443 CDS Human protein_coding chr15:99465486 chr15:99465488 synonymous SNV . 0 23 hm5C_associated_SNPs_64366 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:99465465-99465504
64251 chr2 74684548 74684548 1 + G T READ 74684546 + 74684526 74684566 41 CTGCCCACCTCCCGCCCTCACAGAGGAGATGCTGCTGAAGC CTGCCCACCTCCCGCCCTCACATAGGAGATGCTGCTGAAGC < 41bp 0.75284469627039 0.395286690201843 0.90986246 0.14526296 prediction 0.505689392540779 Functional Loss - INO80B ENSG00000115274;ENSG00000115274 exonic;splicing Human other chr2:74684546 chr2:74684548 stopgain 0.998 1 23 hm5C_associated_SNPs_64367 0 0 1 SRSF1 POSTAR2 ENCODE chr2:74684491-74684593
64251 chr6 109627314 109627314 1 + A C rs182173935 109627310 + 109627290 109627330 41 AGCCACTGGATCCACGGAGCCTCCAGGTGTGTTTCAGATGT AGCCACTGGATCCACGGAGCCTCCCGGTGTGTTTCAGATGT < 41bp 0.752825096122894 0.354331344975697 0.9416012 0.045478106 prediction 0.505650192245787 Functional Loss - CCDC162P ENSG00000203799 ncRNA_exonic Human transcribed_unitary_pseudogene chr6:109627310 chr6:109627314 . . 0 25 hm5C_associated_SNPs_64376 0 0 2 GRWD1 POSTAR2 ENCODE chr6:109627250-109627316
64251 chr11 64034914 64034914 1 + G C rs567001401 64034910 + 64034890 64034930 41 GAGCCTGCTGGGCGAGATGCCGGAGGGGCTGGGGGACGGGC GAGCCTGCTGGGCGAGATGCCGGACGGGCTGGGGGACGGGC < 41bp 0.783783755155427 0.530972668778662 0.9186115 0.41305125 prediction 0.50562217275353 Functional Loss - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64034910 chr11:64034914 nonsynonymous SNV 0.795 0 25 hm5C_associated_SNPs_64382 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:64034900-64034932
64251 chr7 128489503 128489503 1 + C T rs202027738 128489501 + 128489481 128489521 41 CCACGCCGGATGGGGCAGAGCTCGATGTGGATGTGGTTGAG CCACGCCGGATGGGGCAGAGCTTGATGTGGATGTGGTTGAG < 41bp 0.75280880722416 0.477935770736164 0.22514021 0.18307745 prediction 0.50561761444832 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128489501 chr7:128489503 synonymous SNV . 0 23 hm5C_associated_SNPs_64383 1 0 1 FXR2 POSTAR2 ENCODE chr7:128489482-128489505
64251 chr12 44782260 44782260 1 + A T LUAD 44782256 + 44782236 44782276 41 TAGCAAAGACATGGGAATCACTCGAGAAAACACCCAGGCTT TAGCAAAGACATGGGAATCACTCGTGAAAACACCCAGGCTT < 41bp 0.833116118781957 0.580307968456096 0.88759995 0.12116653 prediction 0.505616300651722 Functional Loss - TMEM117 ENSG00000139173 CDS Human protein_coding chr12:44782256 chr12:44782260 synonymous SNV . 0 25 hm5C_associated_SNPs_64384 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:44782244-44782263
64251 chr2 170608313 170608313 1 + G T rs541184927 170608310 + 170608290 170608330 41 AATTCATTGTGTTAGTGTAGCGGGATATGGAATGACTTTAT AATTCATTGTGTTAGTGTAGCGGTATATGGAATGACTTTAT < 41bp 0.811064813216626 0.558275731793755 0.80330867 0.2131542 prediction 0.505578162845743 Functional Loss - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 UTR3 Human protein_coding chr2:170608310 chr2:170608313 . . 0 24 hm5C_associated_SNPs_64391 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:170608220-170608329
64251 chr3 183353482 183353482 1 + G C rs553318815 183353478 + 183353458 183353498 41 GGAGAGTGCGCTGCGCCGCCCGCCGCTGAGGGACCGCGGGG GGAGAGTGCGCTGCGCCGCCCGCCCCTGAGGGACCGCGGGG < 41bp 0.794737574626774 0.541952374162842 0.20025459 0.04320991 prediction 0.505570400927864 Functional Loss - KLHL24 ENSG00000114796 UTR5 Human protein_coding chr3:183353478 chr3:183353482 . . 0 25 hm5C_associated_SNPs_64395 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr3:183353482-183353483
64251 chr13 24233225 24233225 1 + C T STAD 24233223 + 24233203 24233243 41 AACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCCACGGGA AACCTCGTGAAGATCGCGTCCATGGCCTCCAGCCCACGGGA < 41bp 0.752784303162263 0.479736775447879 0.17197135 0.09334397 prediction 0.505568606324525 Functional Loss - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24233223 chr13:24233225 nonsynonymous SNV 0.899 4 23 hm5C_associated_SNPs_64396 0 0 4 RPS3 POSTAR2 ENCODE chr13:24233187-24233235
64251 chr12 120934286 120934286 1 + C T THCA 120934284 + 120934264 120934304 41 TCGGAAGAGATGCAACAGGACTCGGTGGAGTGCGCTACTCA TCGGAAGAGATGCAACAGGACTTGGTGGAGTGCGCTACTCA < 41bp 0.810999242762798 0.558221750704166 0.29181746 0.19528344 prediction 0.505554984117265 Functional Loss - DYNLL1 ENSG00000088986 CDS Human protein_coding chr12:120934284 chr12:120934286 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_64400 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chr12:120934229-120934315
64251 chrX 153608125 153608125 1 + C T SKCM 153608123 + 153608103 153608143 41 CGGCGGCTCTCGCCCCCCAGCTCGTCCGCCGCCTCCTCTTA CGGCGGCTCTCGCCCCCCAGCTTGTCCGCCGCCTCCTCTTA < 41bp 0.765157992981208 0.512380826587726 0.24295989 0.21826664 prediction 0.505554332786964 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153608123 chrX:153608125 nonsynonymous SNV 0.079 3 23 hm5C_associated_SNPs_64401 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr7 102107893 102107893 1 + G T SARC 102107890 + 102107870 102107910 41 GCTGTCAGGGATGTCCGCTACGGGCCCGAGTCCCTCAGCGA GCTGTCAGGGATGTCCGCTACGGTCCCGAGTCCCTCAGCGA < 41bp 0.752774301563372 0.351524568270988 0.8148864 0.29235315 prediction 0.505548603126744 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102107890 chr7:102107893 synonymous SNV . 0 24 hm5C_associated_SNPs_64402 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:102107873-102107894
64251 chr7 152161408 152161408 1 + G T rs558299216 152161405 + 152161385 152161425 41 AGGAGCCGTGGTTCCGCGGACCTGGGCGCGCTCTCTCCCTG AGGAGCCGTGGTTCCGCGGACCTTGGCGCGCTCTCTCCCTG < 41bp 0.75276568842519 0.387879997442548 0.8416291 0.33599323 prediction 0.50553137685038 Functional Loss - LINC01003 ENSG00000261455 ncRNA_exonic Human lincRNA chr7:152161405 chr7:152161408 . . 0 24 hm5C_associated_SNPs_64405 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chr7:152161387-152161408
64251 chr16 2811824 2811824 1 + G C SKCM 2811823 + 2811803 2811843 41 CTCAACCTACCAAAGTTTCTCGGCATGCCAGCTCTTCCCCA CTCAACCTACCAAAGTTTCTCCGCATGCCAGCTCTTCCCCA < 41bp 0.752764409207062 0.440531793708838 0.84589875 0.3258642 prediction 0.505528818414124 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2811823 chr16:2811824 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_64407 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2811800-2811860
64251 chr3 12560653 12560653 1 + G T STAD 12560650 + 12560630 12560670 41 GCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGT GCCTACCATTACTTTCGAAGCAATGGCTGGGTGCCCAAAGT < 41bp 0.752753031938681 0.350560247502994 0.23668867 0.04978013 prediction 0.505506063877363 Functional Loss - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12560650 chr3:12560653 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_64411 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:12560645-12560676
64251 chr20 47706244 47706244 1 + C T PRAD 47706242 + 47706222 47706262 41 TTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCA TTCTTCAAGCATTCTTAGAACGTGGTTCAAACACAATAGCA < 41bp 0.752749651719846 0.483958309313539 0.3788134 0.41339433 prediction 0.505499303439692 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47706242 chr20:47706244 synonymous SNV . 0 23 hm5C_associated_SNPs_64412 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47706176-47706265
64251 chr15 89172601 89172601 1 + C T SKCM 89172599 + 89172579 89172619 41 CAGCGAGCCCGGCCTCCACACCCGGGCCCGGGTCTCTCTAA CAGCGAGCCCGGCCTCCACACCTGGGCCCGGGTCTCTCTAA < 41bp 0.773069462828065 0.520332802814306 0.81122375 0.6254485 prediction 0.505473320027519 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89172599 chr15:89172601 nonsynonymous SNV 0.045 3 23 hm5C_associated_SNPs_64415 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:89172565-89172601
64251 chr20 2378619 2378619 1 + A C LUAD 2378618 + 2378598 2378638 41 TCCTGGATCGAAGCCCCGGTCACCAAAACAACCCAGCCACC TCCTGGATCGAAGCCCCGGTCCCCAAAACAACCCAGCCACC < 41bp 0.752716687216578 0.490164989347448 0.04862222 0.052105814 prediction 0.505433374433155 Functional Loss - TGM6 ENSG00000166948 CDS Human protein_coding chr20:2378618 chr20:2378619 nonsynonymous SNV 0.531 3 22 hm5C_associated_SNPs_64418 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr20:2378580-2378620
64251 chr19 58904420 58904420 1 + C T UCEC 58904418 + 58904398 58904438 41 GGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATT GGTATGCCGCCAAACGCTTCCGTAAAGCTCAGTGTCCCATT < 41bp 0.812163059091538 0.559448058407991 0.6215104 0.58673865 prediction 0.505430001367094 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904418 chr19:58904420 synonymous SNV . 0 23 hm5C_associated_SNPs_64419 0 0 32 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58904340-58904500
64251 chr12 51319202 51319202 1 + G T STAD 51319199 + 51319179 51319219 41 GAGCGCTTTGTGGTAGCTGCCGGGGAGAACATGCACCAGGT GAGCGCTTTGTGGTAGCTGCCGGTGAGAACATGCACCAGGT < 41bp 0.910983662632004 0.6583089180574 0.9377141 0.4118006 prediction 0.505349489149209 Functional Loss - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51319199 chr12:51319202 synonymous SNV . 0 24 hm5C_associated_SNPs_64426 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr12:51319200-51319220
64251 chr8 17354633 17354633 1 + G C rs2517161 17354629 + 17354609 17354649 41 CGCGGCCGGCGGGCGCTCCTCTTCGCGGGACCAGCGAGGCG CGCGGCCGGCGGGCGCTCCTCTTCCCGGGACCAGCGAGGCG < 41bp 0.752643218620651 0.480599041382984 0.23431969 0.14886466 prediction 0.505286437241302 Functional Loss - SLC7A2 ENSG00000003989 UTR5 Human protein_coding chr8:17354629 chr8:17354633 . . 0 25 hm5C_associated_SNPs_64431 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr8:17354600-17354680
64251 chr14 99976540 99976540 1 + G C STAD 99976539 + 99976519 99976559 41 CTTAGGTGAGGCTGAGCCGCCGGGCCCTGTGGATGCCACTG CTTAGGTGAGGCTGAGCCGCCCGGCCCTGTGGATGCCACTG < 41bp 0.849498394786243 0.596868723688546 0.85329187 0.35732168 prediction 0.505259342195393 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99976539 chr14:99976540 synonymous SNV . 0 22 hm5C_associated_SNPs_64437 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:99976507-99976545
64251 chr20 55950016 55950016 1 + C T SKCM 55950014 + 55949994 55950034 41 AGGGGAAATTGCAGGACTTCCTCAAATGGTTGTGGGGATTC AGGGGAAATTGCAGGACTTCCTTAAATGGTTGTGGGGATTC < 41bp 0.752615674728447 0.490547948022687 0.8821951 0.23254335 prediction 0.505231349456893 Functional Loss - RAE1 ENSG00000101146 CDS Human protein_coding chr20:55950014 chr20:55950016 synonymous SNV . 0 23 hm5C_associated_SNPs_64440 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:55950004-55950059
64251 chr20 45355615 45355615 1 + C T BLCA 45355613 + 45355593 45355633 41 TCTTCATCAGCCTCTCCTTCCTCGATCTCATTGGTGAGTCC TCTTCATCAGCCTCTCCTTCCTTGATCTCATTGGTGAGTCC < 41bp 0.81900945161471 0.56642866168548 0.706805 0.1157662 prediction 0.50516157985846 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45355613 chr20:45355615 synonymous SNV . 0 23 hm5C_associated_SNPs_64449 0 0 1 PRPF8 POSTAR2 ENCODE chr20:45355603-45355667
64251 chr16 56792513 56792513 1 + G T UCS 56792511 + 56792491 56792531 41 TCTCCCAGCGATTGGAGAGTCTGAGTGCAGCCACCACCTTT TCTCCCAGCGATTGGAGAGTCTTAGTGCAGCCACCACCTTT < 41bp 0.752576222201158 0.420358290899494 0.13360545 0.18014795 prediction 0.505152444402316 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56792511 chr16:56792513 synonymous SNV . 0 23 hm5C_associated_SNPs_64453 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:56792496-56792525
64251 chr12 95676227 95676227 1 + C T BLCA 95676225 + 95676205 95676245 41 TCGTATCTTATCTGATGTGACTCAAGGTCTACCTCATGCTC TCGTATCTTATCTGATGTGACTTAAGGTCTACCTCATGCTC < 41bp 0.752568423044843 0.47286225431729 0.3276893 0.13871491 prediction 0.505136846089685 Functional Loss - VEZT ENSG00000028203 CDS Human protein_coding chr12:95676225 chr12:95676227 stopgain 0.997 1 23 hm5C_associated_SNPs_64455 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:95676211-95676295
64251 chr1 52249953 52249953 1 + G T UCEC 52249950 + 52249930 52249970 41 CCACAGGCTGTGTCTCATGTCTAGACTATGATGAACATTAC CCACAGGCTGTGTCTCATGTCTATACTATGATGAACATTAC < 41bp 0.752568173192887 0.387147960517486 0.03323978 0.04088062 prediction 0.505136346385773 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52249950 chr1:52249953 nonsynonymous SNV 0.954 4 24 hm5C_associated_SNPs_64456 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:52249950-52249984
64251 chr3 183882160 183882160 1 + C T UCEC 183882158 + 183882138 183882178 41 CACGGGAGGCATCGGGGACTCCCGACCCCCATCCTTCCAGT CACGGGAGGCATCGGGGACTCCTGACCCCCATCCTTCCAGT < 41bp 0.783902517817523 0.531366480391747 0.24521911 0.15419585 prediction 0.505072074851552 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882158 chr3:183882160 stopgain 1.000 1 23 hm5C_associated_SNPs_64460 0 0 8 DDX24 POSTAR2 ENCODE chr3:183882136-183882177
64251 chr1 43316724 43316724 1 + G T LUAD 43316721 + 43316701 43316741 41 AGTGGATGACTCAGAGGGTTCTTGGATCCCACCTGGGGAGA AGTGGATGACTCAGAGGGTTCTTTGATCCCACCTGGGGAGA < 41bp 0.752512438287417 0.364975037661347 0.03953263 0.059411973 prediction 0.505024876574834 Functional Loss - ZNF691 ENSG00000164011 CDS Human protein_coding chr1:43316721 chr1:43316724 nonsynonymous SNV 0.141 0 24 hm5C_associated_SNPs_64463 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43316700-43316734
64251 chr11 9499962 9499962 1 + G T SARC 9499960 + 9499940 9499980 41 GTTATGACCAGAGTGCATTACAGGCGGTTCAGCTGGAAGAT GTTATGACCAGAGTGCATTACATGCGGTTCAGCTGGAAGAT < 41bp 0.75248937288371 0.404449811683617 0.84447205 0.39516112 prediction 0.504978745767421 Functional Loss - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9499960 chr11:9499962 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_64470 0 0 2 PPIG POSTAR2 ENCODE chr11:9499962-9500065
64251 chr17 74381722 74381722 1 + G T UCEC 74381719 + 74381699 74381739 41 TGGCAGCGGGAGCCGCGGGTCGAGGTTATGGATCCAGGTTT TGGCAGCGGGAGCCGCGGGTCGATGTTATGGATCCAGGTTT < 41bp 0.882014025521192 0.629540066174426 0.90675354 0.37507343 prediction 0.504947918693531 Functional Loss - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74381719 chr17:74381722 nonsynonymous SNV 0.419 0 24 hm5C_associated_SNPs_64475 0 0 4 BUD13 POSTAR2 ENCODE chr17:74381719-74381814
64251 chr16 67654694 67654694 1 + T C STAD 67654693 + 67654673 67654713 41 CCAGCAGGGACACATACAAGCTGAAAAGGCACATGAGAACC CCAGCAGGGACACATACAAGCCGAAAAGGCACATGAGAACC < 41bp 0.753987670506244 0.501522288903967 0.36112672 0.15444687 prediction 0.504930763204553 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67654693 chr16:67654694 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_64476 0 0 1 DHX30 POSTAR2 ENCODE chr16:67654661-67654714
64251 chr4 120188591 120188591 1 + G T LUAD 120188588 + 120188568 120188608 41 GTTTCTACTGAGGATGCACTCAGGCAGGTCATCAGCTGGTC GTTTCTACTGAGGATGCACTCAGTCAGGTCATCAGCTGGTC < 41bp 0.752464931969438 0.369417984112917 0.8487244 0.11068961 prediction 0.504929863938876 Functional Loss - USP53 ENSG00000145390;ENSG00000145390 exonic;splicing Human other chr4:120188588 chr4:120188591 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_64477 0 0 1 GRWD1 POSTAR2 ENCODE chr4:120188468-120188636
64251 chr16 28838216 28838216 1 + C T COAD 28838214 + 28838194 28838234 41 GATTCAGCCATTGCCATGAACTCGAAAGTGAATGGGGAACA GATTCAGCCATTGCCATGAACTTGAAAGTGAATGGGGAACA < 41bp 0.819369595706326 0.566927330989842 0.31950665 0.08085838 prediction 0.504884529432968 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28838214 chr16:28838216 nonsynonymous SNV 0.927 3 23 hm5C_associated_SNPs_64483 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:28838180-28838220
64251 chr3 49569013 49569013 1 + C T HNSC 49569011 + 49568991 49569031 41 TCCAACAGAGACCATGGCTCCTCCAGTCAGGGATCCTGTTC TCCAACAGAGACCATGGCTCCTTCAGTCAGGGATCCTGTTC < 41bp 0.805778417088474 0.553355885638434 0.93911684 0.19399336 prediction 0.504845062900079 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569011 chr3:49569013 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64486 0 0 4 ALKBH5 POSTAR2 GSE38201,GSM936506 chr3:49568998-49569020
64251 chrX 114871204 114871204 1 + C T SKCM 114871202 + 114871182 114871222 41 GGAGGAACTTATGAAATTGTCTCCAGAAGAGCTTCTGCTTA GGAGGAACTTATGAAATTGTCTTCAGAAGAGCTTCTGCTTA < 41bp 0.825192862298743 0.572770697632859 0.9513129 0.79990995 prediction 0.504844329331767 Functional Loss - PLS3 ENSG00000102024 CDS Human protein_coding chrX:114871202 chrX:114871204 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_64487 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:114871180-114871220
64251 chr10 43604497 43604497 1 + A T GBM 43604493 + 43604473 43604513 41 CTGCAGGGCTGGTTCTCAACCGGAACCTCTCCATCTCGGAG CTGCAGGGCTGGTTCTCAACCGGATCCTCTCCATCTCGGAG < 41bp 0.752414720465568 0.430309465221263 0.10162982 0.05274403 prediction 0.504829440931135 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43604493 chr10:43604497 nonsynonymous SNV 0.257 2 25 hm5C_associated_SNPs_64488 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr16 1823777 1823777 1 + G C CESC 1823776 + 1823756 1823796 41 CTGGGCTGCGAGTGCCGCATCGAGCCCCAGCGCCCGGCCCG CTGGGCTGCGAGTGCCGCATCCAGCCCCAGCGCCCGGCCCG < 41bp 0.752404771201286 0.446618980666803 0.72799885 0.4088913 prediction 0.504809542402572 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1823776 chr16:1823777 nonsynonymous SNV 0.299 3 22 hm5C_associated_SNPs_64491 0 0 6 BUD13 POSTAR2 ENCODE chr16:1823729-1823825
64251 chr6 28264665 28264665 1 + C T rs139942981 28264663 + 28264643 28264683 41 GTGGTCACATCTGAGTCTGACTCGGAGGAACCTCTGTGGGA GTGGTCACATCTGAGTCTGACTTGGAGGAACCTCTGTGGGA < 41bp 0.787918891250775 0.535524407744687 0.17169964 0.24400273 prediction 0.504788967012176 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28264663 chr6:28264665 nonsynonymous SNV 0.131 1 23 hm5C_associated_SNPs_64494 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:28264631-28264699
64251 chr8 38095662 38095662 1 + C T rs2306899 38095660 + 38095640 38095680 41 GATGATTGGGGTTCAACACCCACGGAGCAGGGTCGACCAAG GATGATTGGGGTTCAACACCCATGGAGCAGGGTCGACCAAG < 41bp 0.783845800452806 0.531459306350593 0.45886272 0.25622174 prediction 0.504772988204426 Functional Loss - DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095660 chr8:38095662 nonsynonymous SNV 0.287 0 23 hm5C_associated_SNPs_64496 1 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:38095650-38095663
64251 chr1 52881036 52881036 1 + A T KIRC 52881032 + 52881012 52881052 41 CATCACCGTAGTCACAGACACAGGAGCCACTCAAAGTCTCC CATCACCGTAGTCACAGACACAGGTGCCACTCAAAGTCTCC < 41bp 0.752355934363145 0.435385795548379 0.8148658 0.4895522 prediction 0.50471186872629 Functional Loss - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52881032 chr1:52881036 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_64503 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:52881002-52881042
64251 chr3 133525492 133525492 1 + G C BLCA 133525488 + 133525468 133525508 41 TCCGGAGCAGAAGGAGCAGTCAGAGAGCTGTTCTTCTTGTT TCCGGAGCAGAAGGAGCAGTCAGACAGCTGTTCTTCTTGTT < 41bp 0.752350779697047 0.459325064146197 0.89229816 0.7262788 prediction 0.504701559394095 Functional Loss - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133525488 chr3:133525492 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_64504 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:133525461-133525503
64251 chrX 149764986 149764986 1 + G T UCS 149764983 + 149764963 149765003 41 CGTCTCGAGATGGAGTCAATCGAGATCTCACTGAGGCTGTT CGTCTCGAGATGGAGTCAATCGATATCTCACTGAGGCTGTT < 41bp 0.909426483601574 0.657084024118877 0.9002285 0.20497385 prediction 0.504684918965394 Functional Loss - MTM1 ENSG00000171100 CDS Human protein_coding chrX:149764983 chrX:149764986 nonsynonymous SNV 0.287 2 24 hm5C_associated_SNPs_64508 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:149764986-149764987
64251 chr19 58846408 58846408 1 + C T STAD 58846406 + 58846386 58846426 41 TGTGCTGTCAGTGGCTGCAGCCCGAGGCGCACTCCAAGGAG TGTGCTGTCAGTGGCTGCAGCCTGAGGCGCACTCCAAGGAG < 41bp 0.757509714059975 0.505168890237889 0.47965333 0.7050619 prediction 0.504681647644171 Functional Loss - ZSCAN22 ENSG00000182318 CDS Human protein_coding chr19:58846406 chr19:58846408 synonymous SNV . 0 23 hm5C_associated_SNPs_64511 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:58846402-58846423
64251 chr7 89909173 89909173 1 + A T STAD 89909169 + 89909149 89909189 41 CATGTCATGCCAGGGAAATGCTCGAGTCCTTGCATTTCTAG CATGTCATGCCAGGGAAATGCTCGTGTCCTTGCATTTCTAG < 41bp 0.871338768385764 0.619006624407227 0.80879277 0.31839716 prediction 0.504664287957075 Functional Loss - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89909169 chr7:89909173 synonymous SNV . 0 25 hm5C_associated_SNPs_64516 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:89909156-89909194
64251 chr10 7844286 7844286 1 + G T UCEC 7844283 + 7844263 7844303 41 CTGACGTGCTGCAAAATTACCAAGAATACAATCTGGCCAAC CTGACGTGCTGCAAAATTACCAATAATACAATCTGGCCAAC < 41bp 0.905153436299334 0.652828556291587 0.3221265 0.117453754 prediction 0.504649760015495 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844283 chr10:7844286 stopgain 0.994 1 24 hm5C_associated_SNPs_64520 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:7844248-7844304
64251 chr21 45220445 45220445 1 + C T LUAD 45220443 + 45220423 45220463 41 GACTGTTTGAAATGGCCAGCCGCCAGAGCACCCCTTCTCAG GACTGTTTGAAATGGCCAGCCGTCAGAGCACCCCTTCTCAG < 41bp 0.817142584424279 0.564819592971729 0.19423077 0.059130162 prediction 0.5046459829051 Functional Loss - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45220443 chr21:45220445 synonymous SNV . 0 23 hm5C_associated_SNPs_64522 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:45220395-45220461
64251 chr22 46719109 46719109 1 + A C OV 46719105 + 46719085 46719125 41 AGGTGACTCCCCGGACAGCTCAACACCAAAGCTTTCGCGGG AGGTGACTCCCCGGACAGCTCAACCCCAAAGCTTTCGCGGG < 41bp 0.752313841038803 0.331337287119289 0.19427425 0.11869997 prediction 0.504627682077606 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46719105 chr22:46719109 synonymous SNV . 0 25 hm5C_associated_SNPs_64524 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:46719066-46719111
64251 chr11 67376948 67376948 1 + G C HNSC 67376944 + 67376924 67376964 41 CCCAAGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGG CCCAAGTATCTGGTGGTGAACGCACACGAGGGGGAGCCGGG < 41bp 0.824631525773667 0.572319509346949 0.5217489 0.35626018 prediction 0.504624032853437 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376944 chr11:67376948 nonsynonymous SNV 0.935 5 25 hm5C_associated_SNPs_64525 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chrX 119387722 119387722 1 + A C UCEC 119387718 + 119387698 119387738 41 GTGACAAGAACCTTGTAATACAGAAATCAAAAGATGAAGCC GTGACAAGAACCTTGTAATACAGACATCAAAAGATGAAGCC < 41bp 0.752310972837219 0.356894512619578 0.17406535 0.19001871 prediction 0.504621945674438 Functional Loss - ZBTB33 ENSG00000177485 CDS Human protein_coding chrX:119387718 chrX:119387722 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_64526 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:119387722-119387723
64251 chrX 119387720 119387720 1 + G T UCEC 119387718 + 119387698 119387738 41 GTGACAAGAACCTTGTAATACAGAAATCAAAAGATGAAGCC GTGACAAGAACCTTGTAATACATAAATCAAAAGATGAAGCC < 41bp 0.752310972837219 0.426536928915453 0.17406535 0.1149216 prediction 0.504621945674438 Functional Loss - ZBTB33 ENSG00000177485 CDS Human protein_coding chrX:119387718 chrX:119387720 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_64527 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:119387700-119387720
64251 chr3 50152983 50152983 1 + C T SKCM 50152981 + 50152961 50153001 41 TGGCCTGTCTGCTCTGCCGGCGCCAGTTCCCGAACAAAGAT TGGCCTGTCTGCTCTGCCGGCGTCAGTTCCCGAACAAAGAT < 41bp 0.752306958956278 0.459214373569092 0.23837677 0.20884752 prediction 0.504613917912556 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50152981 chr3:50152983 synonymous SNV . 0 23 hm5C_associated_SNPs_64530 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:50152927-50152993
64251 chr5 78532835 78532835 1 + G C rs117234103 78532831 + 78532811 78532851 41 GCGGCTCTCCTCGGAGCACTCGCAGCCTTCTGGGGGACCCG GCGGCTCTCCTCGGAGCACTCGCACCCTTCTGGGGGACCCG < 41bp 0.752290723134846 0.466791452045891 0.8843752 0.35678554 prediction 0.504581446269692 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78532831 chr5:78532835 nonsynonymous SNV 0.011 0 25 hm5C_associated_SNPs_64533 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:78532835-78532857
64251 chr19 36431252 36431252 1 + G T LUAD 36431250 + 36431230 36431270 41 CTCACCACCTCTGGCTGTGCCCGCAGGTCGGCCGGCTGCCC CTCACCACCTCTGGCTGTGCCCTCAGGTCGGCCGGCTGCCC < 41bp 0.752281895807731 0.405287187229314 0.52274066 0.21487054 prediction 0.504563791615462 Functional Loss - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36431250 chr19:36431252 nonsynonymous SNV 0.516 0 23 hm5C_associated_SNPs_64535 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:36431229-36431271
64251 chr16 84778363 84778363 1 + C T PRAD 84778361 + 84778341 84778381 41 CTCAGGCCCCTGAATTTATTCTCGGTTGTACAGCTTCCAAA CTCAGGCCCCTGAATTTATTCTTGGTTGTACAGCTTCCAAA < 41bp 0.752279872626297 0.471150794965055 0.046872526 0.035451233 prediction 0.504559745252594 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778361 chr16:84778363 synonymous SNV . 0 23 hm5C_associated_SNPs_64536 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:84778247-84778365
64251 chr19 16962273 16962273 1 + C T rs149541599 16962271 + 16962251 16962291 41 ACAGCGTGCAGAAGAACGAGCACGACAAGACCCCGGAGCAC ACAGCGTGCAGAAGAACGAGCATGACAAGACCCCGGAGCAC < 41bp 0.771705772128292 0.519426671200604 0.30190235 0.3763346 prediction 0.504558201855377 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16962271 chr19:16962273 synonymous SNV . 0 23 hm5C_associated_SNPs_64537 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:16962260-16962280
64251 chr5 54624616 54624616 1 + A C LIHC 54624615 + 54624595 54624635 41 TCTAGTATCTGCACATACCTCAGCGGGAAAAACAGTATGCG TCTAGTATCTGCACATACCTCCGCGGGAAAAACAGTATGCG < 41bp 0.75736383737614 0.50509748828538 0.32806832 0.1749554 prediction 0.50453269818152 Functional Loss - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54624615 chr5:54624616 synonymous SNV . 0 22 hm5C_associated_SNPs_64541 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:54624578-54624616
64251 chr9 90264928 90264928 1 + G T STAD 90264925 + 90264905 90264945 41 GCCGGCTGTAACGTGAACATCAAGAACCGAGAAGGAGAGAC GCCGGCTGTAACGTGAACATCAATAACCGAGAAGGAGAGAC < 41bp 0.752261786629337 0.369672591686271 0.20799753 0.11539009 prediction 0.504523573258673 Functional Loss - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90264925 chr9:90264928 nonsynonymous SNV 0.954 2 24 hm5C_associated_SNPs_64542 0 0 2 GRWD1 POSTAR2 ENCODE chr9:90264843-90264951
64251 chr12 107168503 107168503 1 + G C rs368458606 107168502 + 107168482 107168522 41 TTGGGCGCGCAGAGCGGCCGCGGCTCCCCCGCACCTGCGGC TTGGGCGCGCAGAGCGGCCGCCGCTCCCCCGCACCTGCGGC < 41bp 0.75225470420277 0.460780643062477 0.39243495 0.27436495 prediction 0.50450940840554 Functional Loss - LOC100287944 ENSG00000111785;ENSG00000257545 CDS Human other chr12:107168502 chr12:107168503 synonymous SNV . 0 22 hm5C_associated_SNPs_64544 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:107168501-107168526
64251 chr12 50484057 50484057 1 + C T UCEC 50484055 + 50484035 50484075 41 TAAATTAGACCCCCGCCTAGCTCGACTCCTGGGCATCCATA TAAATTAGACCCCCGCCTAGCTTGACTCCTGGGCATCCATA < 41bp 0.752239607553943 0.455264374031133 0.08674082 0.06481156 prediction 0.504479215107886 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50484055 chr12:50484057 stopgain 0.998 1 23 hm5C_associated_SNPs_64546 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:50484037-50484070
64251 chr14 38091655 38091655 1 + G C rs546376326 38091654 + 38091634 38091674 41 TGCGGAGCTCCGCGTTCCTACGGCACCAGGCCCTGAAAAAG TGCGGAGCTCCGCGTTCCTACCGCACCAGGCCCTGAAAAAG < 41bp 0.75223717450543 0.458832416555159 0.24190933 0.10863972 prediction 0.504474349010859 Functional Loss - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38091654 chr14:38091655 nonsynonymous SNV 0.006 1 22 hm5C_associated_SNPs_64547 0 0 1 EIF3H POSTAR2 ENCODE chr14:38091638-38091682
64251 chr2 133403630 133403630 1 - C G OV 133403631 - 133403611 133403651 41 CCTCAAATTAGCCCTCTTCTCGGCACACTGCTGAAGCTGAA CCTCAAATTAGCCCTCTTCTCCGCACACTGCTGAAGCTGAA < 41bp 0.849382613923032 0.597152689000315 0.55134046 0.27552408 prediction 0.504459849845433 Functional Loss - LYPD1 ENSG00000150551 CDS Human protein_coding chr2:133403631 chr2:133403630 synonymous SNV . 0 22 hm5C_associated_SNPs_64548 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:133403612-133403634
64251 chr14 74040111 74040111 1 + G C rs118157277 74040107 + 74040087 74040127 41 CCAAGAACCTGGGCCCTTTCCTGGGATTGTGGACATGTTCG CCAAGAACCTGGGCCCTTTCCTGGCATTGTGGACATGTTCG < 41bp 0.752219027329403 0.45714566971564 0.8244701 0.45898017 prediction 0.504438054658805 Functional Loss - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040107 chr14:74040111 synonymous SNV . 0 25 hm5C_associated_SNPs_64553 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:74040089-74040120
64251 chr22 50649075 50649075 1 + C T GBM 50649073 + 50649053 50649093 41 GTGGCAGGTACGACCCCGACCACGTGTGCAATGCCTCCGAC GTGGCAGGTACGACCCCGACCATGTGTGCAATGCCTCCGAC < 41bp 0.754851705040366 0.502633693365569 0.4728973 0.37494618 prediction 0.504436023349594 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649073 chr22:50649075 unknown . 0 23 hm5C_associated_SNPs_64554 0 0 3 BUD13 POSTAR2 ENCODE chr22:50649056-50649093
64251 chr4 71768122 71768122 1 + G C rs546138735 71768121 + 71768101 71768141 41 GCCGAACTAGTTGCGGCCACCGAGCAGCCGGCTCTCGGCAC GCCGAACTAGTTGCGGCCACCCAGCAGCCGGCTCTCGGCAC < 41bp 0.752217240555826 0.461964034687073 0.42346266 0.11106902 prediction 0.504434481111651 Functional Loss - MOB1B ENSG00000173542 UTR5 Human protein_coding chr4:71768121 chr4:71768122 . . 0 22 hm5C_associated_SNPs_64555 0 0 3 SSB POSTAR2 GSE95683,GSM2521600 chr4:71768120-71768140
64251 chr17 57724940 57724940 1 + C T PRAD 57724938 + 57724918 57724958 41 AGCCAGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGGG AGCCAGTGAAAATGTTTGATCGTCATTCTAGCCTTGCAGGG < 41bp 0.752211292681632 0.468603107320258 0.829046 0.6083439 prediction 0.504422585363264 Functional Loss - CLTC ENSG00000141367 CDS Human protein_coding chr17:57724938 chr17:57724940 synonymous SNV . 0 23 hm5C_associated_SNPs_64559 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:57724860-57724967
64251 chr21 45563196 45563196 1 + G C BLCA 45563192 + 45563172 45563212 41 AAGTGGCCTTATGCCGGGACCGCAGAGGCCATCAAGGCCCT AAGTGGCCTTATGCCGGGACCGCACAGGCCATCAAGGCCCT < 41bp 0.752199580238719 0.469386490526476 0.60134065 0.3125993 prediction 0.504399160477438 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45563192 chr21:45563196 nonsynonymous SNV 0.101 1 25 hm5C_associated_SNPs_64565 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr21:45563178-45563216
64251 chr11 70263125 70263125 1 + C T LUSC 70263123 + 70263103 70263143 41 TGCCCTGTCTCTCCAGACTACTCCAGTGGTTTTGGCGGCAA TGCCCTGTCTCTCCAGACTACTTCAGTGGTTTTGGCGGCAA < 41bp 0.84144722813468 0.589252940892204 0.9558762 0.4750118 prediction 0.504388574484951 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70263123 chr11:70263125 nonsynonymous SNV 0.910 4 23 hm5C_associated_SNPs_64568 0 0 9 CPSF4 POSTAR2 GSE37401,GSM917667 chr11:70263118-70263143
64251 chr16 1814128 1814128 1 + G C UCS 1814127 + 1814107 1814147 41 TCCCTGCAGCTGAGTCCCAACGGGGGCCAGGAGGACACGCG TCCCTGCAGCTGAGTCCCAACCGGGGCCAGGAGGACACGCG < 41bp 0.752191567254423 0.435029880724964 0.91039634 0.9188029 prediction 0.504383134508846 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1814127 chr16:1814128 nonsynonymous SNV 0.829 3 22 hm5C_associated_SNPs_64569 0 0 4 BUD13 POSTAR2 ENCODE chr16:1814110-1814153
64251 chr20 2097904 2097904 1 + G T LUAD 2097901 + 2097881 2097921 41 TTGCACATCCCCCAAAAACGCAGGACTTCCATGTCTGAGGG TTGCACATCCCCCAAAAACGCAGTACTTCCATGTCTGAGGG < 41bp 0.752190279212291 0.388148431419206 0.88653207 0.41556343 prediction 0.504380558424583 Functional Loss - STK35 ENSG00000125834 CDS Human protein_coding chr20:2097901 chr20:2097904 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_64570 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:2097883-2097912
64251 chr14 74567910 74567910 1 + G T COAD 74567908 + 74567888 74567928 41 TGGAGAAGGTTCGAGGCCTACAGAACCTAGCCTATCAGCTG TGGAGAAGGTTCGAGGCCTACATAACCTAGCCTATCAGCTG < 41bp 0.752186431877742 0.411165718066668 0.19122693 0.08325902 prediction 0.504372863755484 Functional Loss - LIN52 ENSG00000205659 CDS Human protein_coding chr14:74567908 chr14:74567910 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64571 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:74567850-74567920
64251 chr16 1705889 1705889 1 + C T UCEC 1705887 + 1705867 1705907 41 CGGGCACTCAGCGGAAGACACTCGAGGAGCGGCAGCTGCAG CGGGCACTCAGCGGAAGACACTTGAGGAGCGGCAGCTGCAG < 41bp 0.808630297472011 0.55644417658898 0.5245293 0.2621335 prediction 0.504372241766064 Functional Loss - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1705887 chr16:1705889 synonymous SNV . 0 23 hm5C_associated_SNPs_64572 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:1705880-1705900
64251 chr1 160321032 160321032 1 + G T OV 160321030 + 160321010 160321050 41 AGTGCTATCAAGATCACAACCTGAGTCAGAATGGCTCAGCA AGTGCTATCAAGATCACAACCTTAGTCAGAATGGCTCAGCA < 41bp 0.752178785311632 0.409892883745161 0.1266875 0.057914287 prediction 0.504357570623263 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160321030 chr1:160321032 synonymous SNV . 0 23 hm5C_associated_SNPs_64577 0 0 1 TBRG4 POSTAR2 ENCODE chr1:160321018-160321044
64251 chr5 72370577 72370577 1 + C T COAD 72370575 + 72370555 72370595 41 TGTGTATATTCTAGGTGTGTCACGGGGTCCCAGCCCTGTCA TGTGTATATTCTAGGTGTGTCATGGGGTCCCAGCCCTGTCA < 41bp 0.752178750273689 0.484259918990785 0.89146847 0.8902749 prediction 0.504357500547378 Functional Loss - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72370575 chr5:72370577 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64578 0 0 3 BUD13 POSTAR2 ENCODE chr5:72370561-72370608
64251 chr2 3627721 3627721 1 + C T UCEC 3627719 + 3627699 3627739 41 GCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGAC GCCGTACTCTGACAGCTGTGCATGATGCCATCCTTGAGGAC < 41bp 0.764356543810145 0.512195280547981 0.0644362 0.15058663 prediction 0.504322526524327 Functional Loss - RPS7 ENSG00000171863 CDS Human protein_coding chr2:3627719 chr2:3627721 synonymous SNV . 0 23 hm5C_associated_SNPs_64586 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:3627688-3627731
64251 chr3 93768345 93768345 1 + C T UCEC 93768343 + 93768323 93768363 41 CTGTGCTCCTGAGAGTCCAACGCCACCCCCACCCCCTCCTC CTGTGCTCCTGAGAGTCCAACGTCACCCCCACCCCCTCCTC < 41bp 0.808527504901563 0.556377618039328 0.07411888 0.056340903 prediction 0.504299773724471 Functional Loss - ARL13B ENSG00000169379 CDS Human protein_coding chr3:93768343 chr3:93768345 nonsynonymous SNV 0.700 3 23 hm5C_associated_SNPs_64588 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:93768311-93768346
64251 chr11 94278589 94278589 1 + G T LUSC 94278586 + 94278566 94278606 41 ACCGAGAAGCTCTGGCGCAACGCGTTGCTCGCTGGGGCGGT ACCGAGAAGCTCTGGCGCAACGCTTTGCTCGCTGGGGCGGT < 41bp 0.752144330720046 0.359086875940567 0.57605547 0.23070142 prediction 0.504288661440091 Functional Loss - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94278586 chr11:94278589 synonymous SNV . 0 24 hm5C_associated_SNPs_64589 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr11:94278589-94278590
64251 chr2 48028079 48028079 1 + C T UCEC 48028077 + 48028057 48028097 41 CTGGAAATTCCTGAGAATTTCACCACTCGCAATTTGCCAGA CTGGAAATTCCTGAGAATTTCATCACTCGCAATTTGCCAGA < 41bp 0.802880655361779 0.550748829362806 0.037448913 0.055557817 prediction 0.504263651997946 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48028077 chr2:48028079 nonsynonymous SNV 0.982 1 23 hm5C_associated_SNPs_64591 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027990-48028096
64251 chr17 4906118 4906118 1 + C T STAD 4906116 + 4906096 4906136 41 CAGCGCTGCCATGACCAGCTCACGGGGCTGGACTCGGAGAA CAGCGCTGCCATGACCAGCTCATGGGGCTGGACTCGGAGAA < 41bp 0.752127566010722 0.489856581379686 0.58354616 0.67709124 prediction 0.504255132021443 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4906116 chr17:4906118 nonsynonymous SNV 0.746 2 23 hm5C_associated_SNPs_64593 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4906106-4906128
64251 chrX 134713730 134713730 1 + G T UCS 134713727 + 134713707 134713747 41 TTCCAGATGCTACTATCATTCACGATGGCCATGAGGAGAAG TTCCAGATGCTACTATCATTCACTATGGCCATGAGGAGAAG < 41bp 0.909254431376425 0.657139366922762 0.1616649 0.04019752 prediction 0.504230128907325 Functional Loss - INTS6L ENSG00000165359 CDS Human protein_coding chrX:134713727 chrX:134713730 nonsynonymous SNV 0.021 1 24 hm5C_associated_SNPs_64597 0 0 1 PUM2 POSTAR2 ENCODE chrX:134713710-134713751
64251 chr7 36460277 36460277 1 + A C LUAD 36460273 + 36460253 36460293 41 CAATAAAGCAGGTGATTGTTCGGAAGGAAGATGTTACTTCA CAATAAAGCAGGTGATTGTTCGGACGGAAGATGTTACTTCA < 41bp 0.752095878168624 0.34923804749338 0.4265925 0.80241513 prediction 0.504191756337248 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36460273 chr7:36460277 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_64602 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:36460226-36460288
64251 chr3 172482258 172482258 1 + C T LUSC 172482256 + 172482236 172482276 41 ATAGGGTCACTCCTAGATATCTCCAACACACCAGAGTCTAG ATAGGGTCACTCCTAGATATCTTCAACACACCAGAGTCTAG < 41bp 0.752090998401266 0.458330350563057 0.9228791 0.015128046 prediction 0.504181996802533 Functional Loss - ECT2 ENSG00000114346 CDS Human protein_coding chr3:172482256 chr3:172482258 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64603 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:172482240-172482269
64251 chr17 33319629 33319629 1 + C T UCEC 33319627 + 33319607 33319647 41 GTGGAGCGGGTCCTTCACAACGCGCAGGAGGTGGAGAAGGA GTGGAGCGGGTCCTTCACAACGTGCAGGAGGTGGAGAAGGA < 41bp 0.752082404675956 0.473425869720456 0.11043587 0.35519895 prediction 0.504164809351912 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33319627 chr17:33319629 nonsynonymous SNV 0.637 1 23 hm5C_associated_SNPs_64605 0 0 2 FXR2 POSTAR2 ENCODE chr17:33319554-33319712
64251 chr8 98078430 98078430 1 + G T LUAD 98078427 + 98078407 98078447 41 CATCAACTTTTGGATCCAAGCTGGAGTGCCTGGTAAGACCA CATCAACTTTTGGATCCAAGCTGTAGTGCCTGGTAAGACCA < 41bp 0.887359633334883 0.635281469330619 0.6518018 0.13588285 prediction 0.504156328008528 Functional Loss - CPQ ENSG00000104324 CDS Human protein_coding chr8:98078427 chr8:98078430 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_64606 0 0 3 PPIG POSTAR2 ENCODE chr8:98078409-98078445
64251 chr12 118577336 118577336 1 + C T COAD 118577334 + 118577314 118577354 41 GTCCTCTCCGATTATGTGGGCTCGGGGCCTCCCAAGGGCAC GTCCTCTCCGATTATGTGGGCTTGGGGCCTCCCAAGGGCAC < 41bp 0.752073575230686 0.476102160408177 0.1804252 0.17430937 prediction 0.504147150461373 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118577334 chr12:118577336 nonsynonymous SNV 0.968 2 23 hm5C_associated_SNPs_64607 0 0 6 FMR1 POSTAR2 ENCODE chr12:118577325-118577357
64251 chr5 135389707 135389707 1 + G T rs190842339 135389705 + 135389685 135389725 41 CTTTTCAGACAAGCCGGCCTCGGCAATCATCTCTCTGGAAG CTTTTCAGACAAGCCGGCCTCGTCAATCATCTCTCTGGAAG < 41bp 0.873888220535578 0.621846533485886 0.42621768 0.2384122 prediction 0.504083374099383 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135389705 chr5:135389707 nonsynonymous SNV 0.010 2 23 hm5C_associated_SNPs_64611 0 0 5 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:135389704-135389725
64251 chr16 5132575 5132575 1 + G C STAD 5132571 + 5132551 5132591 41 GCCTAGCAGGGTCGGCGGACCTGGGTGTCTGTCTGCACACG GCCTAGCAGGGTCGGCGGACCTGGCTGTCTGTCTGCACACG < 41bp 0.832214277569964 0.580172895384399 0.90587884 0.5884544 prediction 0.50408276437113 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5132571 chr16:5132575 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_64612 0 0 1 SND1 POSTAR2 ENCODE chr16:5132559-5132579
64251 chr11 120918293 120918293 1 + G T LUAD 120918291 + 120918271 120918311 41 CAGCTGTGGAATAACCTGTGCAGGAGATGAAAAAGAAATTG CAGCTGTGGAATAACCTGTGCATGAGATGAAAAAGAAATTG < 41bp 0.752029757839243 0.423737064017867 0.51480836 0.14253 prediction 0.504059515678486 Functional Loss - TBCEL ENSG00000154114 CDS Human protein_coding chr11:120918291 chr11:120918293 stopgain 0.998 1 23 hm5C_associated_SNPs_64617 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:120918265-120918299
64251 chr17 72443085 72443085 1 + C T rs200804586 72443083 + 72443063 72443103 41 CTGCGGGCTGAAGACATGTACTCGGCCCAGAGCCACCAGGC CTGCGGGCTGAAGACATGTACTTGGCCCAGAGCCACCAGGC < 41bp 0.775831226712405 0.523809463785448 0.4484023 0.26737136 prediction 0.504043525853915 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72443083 chr17:72443085 nonsynonymous SNV 0.976 0 23 hm5C_associated_SNPs_64619 0 0 1 RPS3 POSTAR2 ENCODE chr17:72443077-72443114
64251 chr5 43175184 43175184 1 + A C UCEC 43175180 + 43175160 43175200 41 GACCAAGCCAACAGTGGATTCTGAAGCAGAAAAGGCAGAGA GACCAAGCCAACAGTGGATTCTGACGCAGAAAAGGCAGAGA < 41bp 0.752009261345684 0.348837542198059 0.4188198 0.3400189 prediction 0.504018522691368 Functional Loss - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43175180 chr5:43175184 nonsynonymous SNV 0.683 0 25 hm5C_associated_SNPs_64621 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:43175138-43175187
64251 chr19 56171896 56171896 1 + A C MESO 56171892 + 56171872 56171912 41 CCTCCCCCAGTCGTTCCCCCCGCCACGAGAAGAAGAAGAAG CCTCCCCCAGTCGTTCCCCCCGCCCCGAGAAGAAGAAGAAG < 41bp 0.752005313531111 0.328081861700456 0.3875264 0.2232717 prediction 0.504010627062222 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56171892 chr19:56171896 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_64623 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:56171860-56171900
64251 chr20 43565290 43565290 1 + G T SARC 43565288 + 43565268 43565308 41 CACCATGCAGGTCCAGGAGCCGGCTGTGCACATCCCAGGAC CACCATGCAGGTCCAGGAGCCGTCTGTGCACATCCCAGGAC < 41bp 0.751992503749029 0.397450732512594 0.46183744 0.23418364 prediction 0.503985007498057 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43565288 chr20:43565290 nonsynonymous SNV 0.154 0 23 hm5C_associated_SNPs_64627 0 0 5 BUD13 POSTAR2 ENCODE chr20:43565280-43565371
64251 chr10 51769403 51769403 1 + C T UCEC 51769401 + 51769381 51769421 41 GTATTGAATGCTCAGGTATCCACCGCAGTCTTGGCCCCCAC GTATTGAATGCTCAGGTATCCATCGCAGTCTTGGCCCCCAC < 41bp 0.788354828058871 0.536371762168125 0.06143567 0.08690184 prediction 0.503966131781492 Functional Loss - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51769401 chr10:51769403 synonymous SNV . 0 23 hm5C_associated_SNPs_64628 0 0 1 BUD13 POSTAR2 ENCODE chr10:51769384-51769457
64251 chr14 65560472 65560472 1 - C A UCEC 65560474 - 65560454 65560494 41 CGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGA CGTAGGGACCACATCAAAGACATCTTTCACAGTTTGCGGGA < 41bp 0.751982446614575 0.437827847830163 0.1649031 0.06474927 prediction 0.503964893229151 Functional Loss - MAX ENSG00000125952 CDS Human protein_coding chr14:65560474 chr14:65560472 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_64629 0 0 8 TARDBP POSTAR2 DRA001158,DRS012385 chr14:65560441-65560479
64251 chr1 110527620 110527620 1 + A C rs536442460 110527616 + 110527596 110527636 41 CGCGCGGGCAGGCGGGCGGGCGCCAGAGGGGGAAAGAGGCG CGCGCGGGCAGGCGGGCGGGCGCCCGAGGGGGAAAGAGGCG < 41bp 0.879448683184132 0.627471799489432 0.9118843 0.891224 prediction 0.503953767389402 Functional Loss - AHCYL1 ENSG00000168710 UTR5 Human protein_coding chr1:110527616 chr1:110527620 . . 0 25 hm5C_associated_SNPs_64630 0 0 14 DDX3X POSTAR2 ENCODE chr1:110527543-110527698
64251 chr3 49736907 49736907 1 + A C rs145834474 49736906 + 49736886 49736926 41 GCTTAACTCTGGCACCTACCCAGTGGCAGGCTACCGGCCCC GCTTAACTCTGGCACCTACCCCGTGGCAGGCTACCGGCCCC < 41bp 0.773428770228409 0.521470957052648 0.47594476 0.47346133 prediction 0.503915626351522 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736906 chr3:49736907 synonymous SNV . 0 22 hm5C_associated_SNPs_64633 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:49736855-49736907
64251 chr15 79183876 79183876 1 + C T LUAD 79183874 + 79183854 79183894 41 CAGTGAGACCCCTCAGCCTCCTCGGAAGAAAAGGGCCCGGG CAGTGAGACCCCTCAGCCTCCTTGGAAGAAAAGGGCCCGGG < 41bp 0.815852621729291 0.56391349639589 0.120818496 0.105529964 prediction 0.503878250666801 Functional Loss - MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79183874 chr15:79183876 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_64636 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:79183838-79183877
64251 chr1 44684373 44684373 1 + C T rs35249619 44684371 + 44684351 44684391 41 TACCAGTATTTGATGCTGGGCACGAACGACGGCGGAAGGAA TACCAGTATTTGATGCTGGGCATGAACGACGGCGGAAGGAA < 41bp 0.815739583313076 0.563802303874483 0.10284653 0.13517228 prediction 0.503874558877185 Functional Loss - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684371 chr1:44684373 synonymous SNV . 0 23 hm5C_associated_SNPs_64637 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:44684360-44684380
64251 chr3 41280756 41280756 1 + G T THYM 41280753 + 41280733 41280773 41 CAGTTGATGGGCTGCCAGATCTGGGGCATGCCCAGGACCTC CAGTTGATGGGCTGCCAGATCTGTGGCATGCCCAGGACCTC < 41bp 0.906509926913926 0.654586708642347 0.862285 0.38683504 prediction 0.503846436543159 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41280753 chr3:41280756 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_64639 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:41280700-41280780
64251 chr1 26514789 26514789 1 + C T UCEC 26514787 + 26514767 26514807 41 TCCAGGCCGGGCCCCCCCACCCCGAGAGGAAGGTAGGTGTC TCCAGGCCGGGCCCCCCCACCCTGAGAGGAAGGTAGGTGTC < 41bp 0.795821762628095 0.543906512953896 0.55780035 0.572614 prediction 0.503830499348398 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26514787 chr1:26514789 stopgain 0.421 0 23 hm5C_associated_SNPs_64642 0 0 1 PPIG POSTAR2 ENCODE chr1:26514745-26514797
64251 chr6 345905 345905 1 + C T ESCA 345903 + 345883 345923 41 TCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTA TCATTCACGAGTGCCGGCTCCGTGGTGAGAGCTGCCTTGTA < 41bp 0.751910412282281 0.482335558747319 0.3498947 0.60562956 prediction 0.503820824564562 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:345903 chr6:345905 synonymous SNV . 0 23 hm5C_associated_SNPs_64644 0 0 5 BUD13 POSTAR2 ENCODE chr6:345878-345971
64251 chr2 183943837 183943837 1 + A C UCEC 183943833 + 183943813 183943853 41 GGGGTGGTTGTGGTTATGTGCAGGACCTTAGCTCGGACCTG GGGGTGGTTGTGGTTATGTGCAGGCCCTTAGCTCGGACCTG < 41bp 0.907618759943493 0.655713316607912 0.883864 0.87402487 prediction 0.503810886671164 Functional Loss - DUSP19 ENSG00000162999 CDS Human protein_coding chr2:183943833 chr2:183943837 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_64648 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:183943804-183943837
64251 chr2 47606971 47606971 1 + G T UCEC 47606968 + 47606948 47606988 41 TGACAGTAAATGGGGAACAACTGGATCTGGATCCTGGTCAA TGACAGTAAATGGGGAACAACTGTATCTGGATCCTGGTCAA < 41bp 0.909417757846089 0.657514591040858 0.7854998 0.1257045 prediction 0.503806333610462 Functional Loss - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47606968 chr2:47606971 nonsynonymous SNV 0.947 2 24 hm5C_associated_SNPs_64649 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:47606936-47606972
64251 chr11 65827302 65827302 1 + A T STAD 65827298 + 65827278 65827318 41 AGATGCACGATGTGACAGCGCAGGACCCTAAGCTCTTGGTT AGATGCACGATGTGACAGCGCAGGTCCCTAAGCTCTTGGTT < 41bp 0.861072416850408 0.609175551768264 0.72179186 0.45671743 prediction 0.503793730164288 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827298 chr11:65827302 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_64652 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:65827272-65827327
64251 chr20 2637071 2637071 1 + T C rs8958 2637070 + 2637050 2637090 41 CCTGAAGACAAGGGGTAACACTCCAAAATATGGACTCATTT CCTGAAGACAAGGGGTAACACCCCAAAATATGGACTCATTT < 41bp 0.751889459589601 0.489989876594169 0.97541124 0.054619998 prediction 0.503778919179203 Functional Loss - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2637070 chr20:2637071 synonymous SNV . 0 22 hm5C_associated_SNPs_64653 1 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:2636997-2637194
64251 chr2 73475003 73475003 1 + C T UCEC 73475001 + 73474981 73475021 41 TTGCCCTTTTGAATGTCGAGCTCGAGTTGAAAGCTGAGAAA TTGCCCTTTTGAATGTCGAGCTTGAGTTGAAAGCTGAGAAA < 41bp 0.817207970389121 0.565324555328119 0.1071915 0.07436177 prediction 0.503766830122005 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73475001 chr2:73475003 synonymous SNV . 0 23 hm5C_associated_SNPs_64654 0 0 25 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:73474936-73475046
64251 chr1 9780224 9780224 1 + C T rs368722127 9780222 + 9780202 9780242 41 ACTGTGCGCAGTAACCCCAACACGGATAGCGCCGCTGCCCT ACTGTGCGCAGTAACCCCAACATGGATAGCGCCGCTGCCCT < 41bp 0.768259070584986 0.5163851908481 0.38432407 0.5105321 prediction 0.503747759473772 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9780222 chr1:9780224 nonsynonymous SNV 0.431 1 23 hm5C_associated_SNPs_64661 0 0 2 BUD13 POSTAR2 ENCODE chr1:9780160-9780225
64251 chr14 95030068 95030068 1 + G T LUAD 95030065 + 95030045 95030085 41 TTTTTCTCCCCGCTGAGCATCTCGGCGGCCTACGCCATGCT TTTTTCTCCCCGCTGAGCATCTCTGCGGCCTACGCCATGCT < 41bp 0.751871829805528 0.341164306067077 0.8773227 0.16676971 prediction 0.503743659611056 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030065 chr14:95030068 synonymous SNV . 0 24 hm5C_associated_SNPs_64663 0 0 1 SND1 POSTAR2 ENCODE chr14:95030066-95030151
64251 chr10 12199989 12199989 1 + C T BLCA 12199987 + 12199967 12200007 41 CCCATCAAACTCTTCTACACCTCCAACATCCCCATCATCCT CCCATCAAACTCTTCTACACCTTCAACATCCCCATCATCCT < 41bp 0.751871100495758 0.44836118284436 0.94866174 0.007327169 prediction 0.503742200991515 Functional Loss - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12199987 chr10:12199989 nonsynonymous SNV 0.984 4 23 hm5C_associated_SNPs_64664 0 0 11 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr10:12199954-12199989
64251 chr13 114290368 114290368 1 + C T UCEC 114290366 + 114290346 114290386 41 AGCCGGCCACCGCCACCCAACTCAGTCATCCACCTGCCCTT AGCCGGCCACCGCCACCCAACTTAGTCATCCACCTGCCCTT < 41bp 0.751864975818664 0.473233132912291 0.06854501 0.016508728 prediction 0.503729951637328 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290366 chr13:114290368 nonsynonymous SNV 0.952 2 23 hm5C_associated_SNPs_64665 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:114290339-114290390
64251 chr19 47865848 47865848 1 + C T rs114512655 47865846 + 47865826 47865866 41 GCCGGGCGGGCCGCACGGGCCCCGGAGTCTGCTTCCGCCTC GCCGGGCGGGCCGCACGGGCCCTGGAGTCTGCTTCCGCCTC < 41bp 0.773545630293619 0.521697797616193 0.41834077 0.43819767 prediction 0.503695665354852 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47865846 chr19:47865848 synonymous SNV . 0 23 hm5C_associated_SNPs_64669 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47865844-47865881
64251 chr11 66249733 66249733 1 + A T LUAD 66249729 + 66249709 66249749 41 GCGTGTCTAGCCTGGACTGCCGTGAGGCCTTCCGCCTGCTG GCGTGTCTAGCCTGGACTGCCGTGTGGCCTTCCGCCTGCTG < 41bp 0.751845536286955 0.437766729417692 0.6573081 0.6145347 prediction 0.50369107257391 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249729 chr11:66249733 nonsynonymous SNV 0.985 1 25 hm5C_associated_SNPs_64670 0 0 3 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr11 57509396 57509396 1 + G C HNSC 57509395 + 57509375 57509415 41 AAGCCCCGGAGGGGCAGCTTCGAGGTGACGCTGCTGCGCCC AAGCCCCGGAGGGGCAGCTTCCAGGTGACGCTGCTGCGCCC < 41bp 0.862449102398605 0.610603967737296 0.9262252 0.9094491 prediction 0.503690269322619 Functional Loss - SELENOH ENSG00000211450 CDS Human protein_coding chr11:57509395 chr11:57509396 unknown 1.000 4 22 hm5C_associated_SNPs_64671 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:57509357-57509417
64251 chr11 75282989 75282989 1 + G C LUSC 75282988 + 75282968 75283008 41 TTGACCAGGACATCTACGGGCGCGAGGAGCTGCGCAGCCCC TTGACCAGGACATCTACGGGCCCGAGGAGCTGCGCAGCCCC < 41bp 0.859683675708699 0.607846508000492 0.50501376 0.09830153 prediction 0.503674335416414 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75282988 chr11:75282989 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_64674 0 0 9 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr11:75282968-75282989
64251 chr22 38471101 38471101 1 + G T SKCM 38471099 + 38471079 38471119 41 CAGGGATACACGAGGGGCTGCTGGGCCCTTGGACAAGGGTG CAGGGATACACGAGGGGCTGCTTGGCCCTTGGACAAGGGTG < 41bp 0.751832650112527 0.409584860738325 0.5633491 0.29879913 prediction 0.503665300225055 Functional Loss - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38471099 chr22:38471101 nonsynonymous SNV 0.906 1 23 hm5C_associated_SNPs_64675 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38471076-38471109
64251 chr11 75438556 75438556 1 + G T LUAD 75438554 + 75438534 75438574 41 CCCCATGGAGTCCTGGCAGTCGGAGCCTTTGCCAACCTGTG CCCCATGGAGTCCTGGCAGTCGTAGCCTTTGCCAACCTGTG < 41bp 0.75182726847079 0.37985316641392 0.93716013 0.22306576 prediction 0.503654536941579 Functional Loss - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75438554 chr11:75438556 nonsynonymous SNV 0.571 4 23 hm5C_associated_SNPs_64677 0 0 1 DDX3X POSTAR2 ENCODE chr11:75438526-75438590
64251 chr2 20647498 20647498 1 + C T BLCA 20647496 + 20647476 20647516 41 TTCTCGGTGGACAGCCCGGACTCGCTGGAGAACATCCCCGA TTCTCGGTGGACAGCCCGGACTTGCTGGAGAACATCCCCGA < 41bp 0.766303259331716 0.514494173027393 0.2693381 0.2546081 prediction 0.503618172608647 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647496 chr2:20647498 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_64682 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:20647425-20647519
64251 chr19 12921170 12921170 1 + G C KIRC 12921166 + 12921146 12921186 41 GCCGTGAAGAAATGGCAGTTCGTGGAGAAACTGCAGGACTT GCCGTGAAGAAATGGCAGTTCGTGCAGAAACTGCAGGACTT < 41bp 0.751800406416949 0.469362780541489 0.8207596 0.32783645 prediction 0.503600812833898 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12921166 chr19:12921170 nonsynonymous SNV 0.730 5 25 hm5C_associated_SNPs_64686 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12921153-12921212
64251 chr19 52085096 52085096 1 + C T UCEC 52085094 + 52085074 52085114 41 AATGCTAAAAGAAAAGGAGCCGCGTGTGGAGGAGGCTGAAG AATGCTAAAAGAAAAGGAGCCGTGTGTGGAGGAGGCTGAAG < 41bp 0.753678802371354 0.501879320388581 0.2527575 0.23382023 prediction 0.503598963965547 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52085094 chr19:52085096 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_64687 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:52085096-52085110
64251 chr2 178083870 178083870 1 + C T UCEC 178083868 + 178083848 178083888 41 GGCAGTTTTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGG GGCAGTTTTGGTGGAAGAAGCTTGGGCAGTCCCTATGGTGG < 41bp 0.751788976233562 0.482793431856944 0.38173747 0.33562714 prediction 0.503577952467124 Functional Loss - HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178083868 chr2:178083870 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64689 0 0 4 DDX24 POSTAR2 ENCODE chr2:178083851-178083889
64251 chr9 139700564 139700564 1 + C T CESC 139700562 + 139700542 139700582 41 CGCTTCCTGGCCCAGAGGAACACGGAGGAGAACCTGGAGCT CGCTTCCTGGCCCAGAGGAACATGGAGGAGAACCTGGAGCT < 41bp 0.768642069096948 0.516857313387779 0.7021871 0.48806444 prediction 0.503569511418339 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139700562 chr9:139700564 nonsynonymous SNV 0.562 3 23 hm5C_associated_SNPs_64690 0 0 7 BUD13 POSTAR2 ENCODE chr9:139700509-139700598
64251 chr5 159463735 159463735 1 + C T COAD 159463733 + 159463713 159463753 41 AAAGTTCTTATAGTCGAGCCCTCGAAATGTGCCCATCCTGC AAAGTTCTTATAGTCGAGCCCTTGAAATGTGCCCATCCTGC < 41bp 0.751773595573943 0.458467863554367 0.310265 0.026696324 prediction 0.503547191147885 Functional Loss - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159463733 chr5:159463735 synonymous SNV . 0 23 hm5C_associated_SNPs_64692 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:159463698-159463736
64251 chr11 125474114 125474114 1 + A T LIHC 125474110 + 125474090 125474130 41 TGTAGTTCCTGGATATATCTCCCGATCTGTGGCTGGCTCCT TGTAGTTCCTGGATATATCTCCCGTTCTGTGGCTGGCTCCT < 41bp 0.751772974121061 0.414482970342781 0.26323706 0.30021495 prediction 0.503545948242121 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125474110 chr11:125474114 synonymous SNV . 0 25 hm5C_associated_SNPs_64693 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:125474074-125474135
64251 chr5 140604641 140604641 1 + G C rs142548755 140604640 + 140604620 140604660 41 GCCCTCAGGTCGCTGGACTACGAGGCCCTACAGGAGTTCGA GCCCTCAGGTCGCTGGACTACCAGGCCCTACAGGAGTTCGA < 41bp 0.847754981052999 0.595984937026323 0.3008863 0.07954338 prediction 0.503540088053352 Functional Loss - PCDHB14 ENSG00000120327 CDS Human protein_coding chr5:140604640 chr5:140604641 nonsynonymous SNV 0.558 3 22 hm5C_associated_SNPs_64694 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140604620-140604665
64251 chr19 32873817 32873817 1 + C T BLCA 32873815 + 32873795 32873835 41 TCATATAGTTTAGAAAAAATCTCCAGTCTGGCCCCTCCTAG TCATATAGTTTAGAAAAAATCTTCAGTCTGGCCCCTCCTAG < 41bp 0.803303937863879 0.551536217670619 0.92291844 0.1327608 prediction 0.50353544038652 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32873815 chr19:32873817 nonsynonymous SNV 0.989 0 23 hm5C_associated_SNPs_64695 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr19:32873778-32873835
64251 chr1 160318843 160318843 1 + T C STAD 160318842 + 160318822 160318862 41 TAGTAGAGAAAGAGGAGGACCTACAGTGGGTATTGACTGAT TAGTAGAGAAAGAGGAGGACCCACAGTGGGTATTGACTGAT < 41bp 0.767286872302888 0.515521528614778 0.90492415 0.10148391 prediction 0.503530687376219 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160318842 chr1:160318843 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_64696 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:160318840-160318860
64251 chr6 37336783 37336783 1 + G T LUSC 37336781 + 37336761 37336801 41 ATGTTTAAGGTGACCATGTCCAGGATTCTGAGGCTCAAAAT ATGTTTAAGGTGACCATGTCCATGATTCTGAGGCTCAAAAT < 41bp 0.874957898722283 0.623198722001775 0.61605316 0.09894827 prediction 0.503518353441017 Functional Loss - RNF8 ENSG00000112130 CDS Human protein_coding chr6:37336781 chr6:37336783 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_64697 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:37336719-37336818
64251 chr11 74717427 74717427 1 + G T UCEC 74717424 + 74717404 74717444 41 TGTTTGAATGTGGGACCAAGCAAGAGTGTGAGCAGATTGCC TGTTTGAATGTGGGACCAAGCAATAGTGTGAGCAGATTGCC < 41bp 0.912145130643349 0.660397657252625 0.43856803 0.64636326 prediction 0.503494946781449 Functional Loss - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74717424 chr11:74717427 stopgain 0.457 1 24 hm5C_associated_SNPs_64698 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:74717406-74717439
64251 chr15 81294774 81294774 1 + G C rs11541231 81294773 + 81294753 81294793 41 GGCTGACCTGCTGCTGCTGTCGAGCGAGGCGCGGCCCGTGC GGCTGACCTGCTGCTGCTGTCCAGCGAGGCGCGGCCCGTGC < 41bp 0.85659344710105 0.604846804185908 0.91051745 0.52668774 prediction 0.503493285830285 Functional Loss - TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81294773 chr15:81294774 synonymous SNV . 0 22 hm5C_associated_SNPs_64699 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:81294731-81294776
64251 chr17 34893859 34893859 1 + C T COAD 34893857 + 34893837 34893877 41 TTGGTCTATTAAATGCCAACCGCGAAGGAATAATCTCTACC TTGGTCTATTAAATGCCAACCGTGAAGGAATAATCTCTACC < 41bp 0.802290420003299 0.550559256287803 0.27248144 0.17159685 prediction 0.503462327430991 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893857 chr17:34893859 synonymous SNV . 0 23 hm5C_associated_SNPs_64702 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:34893827-34893860
64251 chr1 52878240 52878240 1 + G T LUAD 52878237 + 52878217 52878257 41 TGGAGCCTCGAGTTAGTGCTCTGGAAGAGGACATGGATGAT TGGAGCCTCGAGTTAGTGCTCTGTAAGAGGACATGGATGAT < 41bp 0.911163000587507 0.659433543891191 0.08501628 0.089248806 prediction 0.503458913392632 Functional Loss - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52878237 chr1:52878240 stopgain 0.999 1 24 hm5C_associated_SNPs_64704 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:52878204-52878240
64251 chr5 10254914 10254914 1 + G T LUSC 10254911 + 10254891 10254931 41 TGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAGAT TGGTGGAACTGTCCAAGTCTCAGTATGATGAAATTGGAGAT < 41bp 0.900287718862119 0.648566546845685 0.87994266 0.25802842 prediction 0.503442344032868 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254911 chr5:10254914 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_64706 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr22 40364245 40364245 1 + A T HNSC 40364241 + 40364221 40364261 41 AGCAGCTGCAGCAGCCCCCACAGCAGCGATATCTGCAGCAC AGCAGCTGCAGCAGCCCCCACAGCTGCGATATCTGCAGCAC < 41bp 0.874788984086403 0.623080221685521 0.43296382 0.4781251 prediction 0.503417524801764 Functional Loss - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40364241 chr22:40364245 nonsynonymous SNV 0.629 0 25 hm5C_associated_SNPs_64712 0 0 1 UCHL5 POSTAR2 ENCODE chr22:40364229-40364271
64251 chr5 176678794 176678794 1 + G T ESCA 176678791 + 176678771 176678811 41 AGTGCTGTGGGGCTTTCCACCTGGAGTGCCTTGGATTGACT AGTGCTGTGGGGCTTTCCACCTGTAGTGCCTTGGATTGACT < 41bp 0.751701898967539 0.385973956726159 0.7409323 0.15808386 prediction 0.503403797935078 Functional Loss - NSD1 ENSG00000165671 CDS Human protein_coding chr5:176678791 chr5:176678794 stopgain 1.000 1 24 hm5C_associated_SNPs_64713 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr5:176678737-176678842
64251 chr19 48953993 48953993 1 + C T COAD 48953991 + 48953971 48954011 41 CTACGGACGGCGGCTCCTGGCACGTGGACCAGCGGCCATTC CTACGGACGGCGGCTCCTGGCATGTGGACCAGCGGCCATTC < 41bp 0.79283159413775 0.541137801333356 0.34273854 0.35266116 prediction 0.503387585608788 Functional Loss - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48953991 chr19:48953993 synonymous SNV . 0 23 hm5C_associated_SNPs_64717 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:48953952-48953994
64251 chr14 64892864 64892864 1 + G T UCEC 64892861 + 64892841 64892881 41 CCAAAGTTCTGCTGTCAGCACTAGAACGCCTGAAGCACCGG CCAAAGTTCTGCTGTCAGCACTATAACGCCTGAAGCACCGG < 41bp 0.751692337535418 0.352630659198972 0.06126362 0.16552165 prediction 0.503384675070837 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64892861 chr14:64892864 stopgain 0.737 0 24 hm5C_associated_SNPs_64718 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:64892844-64892891
64251 chr1 33239628 33239628 1 + G T rs529256904 33239626 + 33239606 33239646 41 CCCAGTGCTTCTAGGGCAGGCTGGGTGGTGGTCCCCTAGGT CCCAGTGCTTCTAGGGCAGGCTTGGTGGTGGTCCCCTAGGT < 41bp 0.751687137565976 0.438304797859084 0.7810689 0.4071675 prediction 0.503374275131952 Functional Loss - KIAA1522 ENSG00000162522 UTR3 Human protein_coding chr1:33239626 chr1:33239628 . . 0 23 hm5C_associated_SNPs_64720 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:33239612-33239636
64251 chr14 101521810 101521810 1 + G T LUAD 101521807 + 101521787 101521827 41 ATTCATCAAAGCGAGTCATACACGGCTCTCCTCTCTTTTAG ATTCATCAAAGCGAGTCATACACTGCTCTCCTCTCTTTTAG < 41bp 0.878186892986726 0.626510147497292 0.10015431 0.03512937 prediction 0.503353490978869 Functional Loss - MIR485 ENSG00000208027 ncRNA_exonic Human miRNA chr14:101521807 chr14:101521810 . . 0 24 hm5C_associated_SNPs_64721 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101521799-101521824
64251 chr5 156729888 156729888 1 + G T HNSC 156729886 + 156729866 156729906 41 ATGTTCCTGGCCAACCACAACAGGATCACCCAGGTGAGGGC ATGTTCCTGGCCAACCACAACATGATCACCCAGGTGAGGGC < 41bp 0.75167268320754 0.406473030790254 0.35203543 0.027689725 prediction 0.503345366415079 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156729886 chr5:156729888 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_64722 0 0 2 PPIG POSTAR2 ENCODE chr5:156729832-156729898
64251 chr22 24919673 24919673 1 + G T LUAD 24919670 + 24919650 24919690 41 CTCCTGGGCTGTCCCGTAGCCGGGATGGACTGCTAGTTGCT CTCCTGGGCTGTCCCGTAGCCGGTATGGACTGCTAGTTGCT < 41bp 0.917441362952423 0.665799225370278 0.89308065 0.2160643 prediction 0.50328427516429 Functional Loss - UPB1 ENSG00000100024 CDS Human protein_coding chr22:24919670 chr22:24919673 nonsynonymous SNV 0.112 5 24 hm5C_associated_SNPs_64731 0 0 1 HNRNPC POSTAR2 SRX1438577 chr22:24919660-24919680
64251 chr19 44470044 44470044 1 + A C rs151193849 44470043 + 44470023 44470063 41 GCAAATATGGGAACAAATTGCAAGTGACCTAACCAGGTCTC GCAAATATGGGAACAAATTGCCAGTGACCTAACCAGGTCTC < 41bp 0.760785720667331 0.509148548963229 0.41977137 0.29653898 prediction 0.503274343408204 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470043 chr19:44470044 synonymous SNV . 0 22 hm5C_associated_SNPs_64733 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44470023-44470053
64251 chr2 85531118 85531118 1 + A C LUAD 85531117 + 85531097 85531137 41 CCCCCTCGGCTGGCTCGTCCCACAGTAAGGAACCCACAGCC CCCCCTCGGCTGGCTCGTCCCCCAGTAAGGAACCCACAGCC < 41bp 0.751628046768267 0.490283760007725 0.092048824 0.032042533 prediction 0.503256093536534 Functional Loss - TCF7L1 ENSG00000152284 CDS Human protein_coding chr2:85531117 chr2:85531118 synonymous SNV . 0 22 hm5C_associated_SNPs_64734 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85531087-85531122
64251 chr19 42793230 42793230 1 + G T UCEC 42793228 + 42793208 42793248 41 AAGTAGACAGTCAGGCGCTACAGGAACTGACGCAGGTCTAG AAGTAGACAGTCAGGCGCTACATGAACTGACGCAGGTCTAG < 41bp 0.751625951632001 0.403972721745164 0.8172319 0.54804033 prediction 0.503251903264001 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42793228 chr19:42793230 nonsynonymous SNV 0.951 3 23 hm5C_associated_SNPs_64735 0 0 1 PRPF8 POSTAR2 ENCODE chr19:42793225-42793302
64251 chr8 23104195 23104195 1 + G T rs2294123 23104192 + 23104172 23104212 41 GGCTTGTGTTCGCAGCCTTGCCGGGGCTGGGGTTCCGATGT GGCTTGTGTTCGCAGCCTTGCCGTGGCTGGGGTTCCGATGT < 41bp 0.774470478845981 0.522858094405726 0.913707 0.57850116 prediction 0.503224768880511 Functional Loss - CHMP7 ENSG00000147457 UTR5 Human protein_coding chr8:23104192 chr8:23104195 . . 0 24 hm5C_associated_SNPs_64738 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:23104180-23104200
64251 chr3 9743521 9743521 1 + C T CESC 9743519 + 9743499 9743539 41 ACTCGGCTGCAGGAGGTGCGCTCAGCCTTCTTGGCTGCGTA ACTCGGCTGCAGGAGGTGCGCTTAGCCTTCTTGGCTGCGTA < 41bp 0.7549286455716 0.503318760928039 0.39981663 0.47399023 prediction 0.503219769287123 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9743519 chr3:9743521 nonsynonymous SNV 0.971 2 23 hm5C_associated_SNPs_64739 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:9743498-9743565
64251 chr19 17424890 17424890 1 + C T LGG 17424888 + 17424868 17424908 41 AGCAATTTTAGTCGATTTCACGCGGACTCCGTGTGCAAAGC AGCAATTTTAGTCGATTTCACGTGGACTCCGTGTGCAAAGC < 41bp 0.751600258537481 0.488142838128667 0.6561177 0.68252724 prediction 0.503200517074962 Functional Loss - DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424888 chr19:17424890 nonsynonymous SNV 0.431 1 23 hm5C_associated_SNPs_64744 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr19:17424875-17424904
64251 chr17 48745151 48745151 1 + C T SKCM 48745149 + 48745129 48745169 41 GCACAGGGCTGGGTCCCTGCCTCCAGGGCTCTGGGTGCCCA GCACAGGGCTGGGTCCCTGCCTTCAGGGCTCTGGGTGCCCA < 41bp 0.751593432154585 0.473872765733264 0.9407475 0.038259238 prediction 0.503186864309169 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745149 chr17:48745151 synonymous SNV . 0 23 hm5C_associated_SNPs_64747 0 0 1 PRPF8 POSTAR2 ENCODE chr17:48745092-48745159
64251 chr4 119621741 119621741 1 + C T UCS 119621739 + 119621719 119621759 41 AATTGATGAGATTGCAGCACCTCGATCATTTATTTTTCTCT AATTGATGAGATTGCAGCACCTTGATCATTTATTTTTCTCT < 41bp 0.751580002814271 0.460144922263896 0.78107476 0.155667 prediction 0.503160005628542 Functional Loss - METTL14 ENSG00000145388 CDS Human protein_coding chr4:119621739 chr4:119621741 stopgain 0.998 1 23 hm5C_associated_SNPs_64752 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:119621702-119621745
64251 chr2 198571795 198571795 1 + C T LUAD 198571793 + 198571773 198571813 41 TGGAGAGCTCTATTTCTTGCCTCGATTCTATGGACATCCAT TGGAGAGCTCTATTTCTTGCCTTGATTCTATGGACATCCAT < 41bp 0.789527479691862 0.537957439165059 0.62542784 0.03476587 prediction 0.503140081053607 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571793 chr2:198571795 stopgain 0.991 0 23 hm5C_associated_SNPs_64756 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:198571732-198571795
64251 chr9 35792993 35792993 1 + C T BLCA 35792991 + 35792971 35793011 41 AGGCCCTGCAGGGCAGCAACCTCAGTGTGCAGCACCAGGTG AGGCCCTGCAGGGCAGCAACCTTAGTGTGCAGCACCAGGTG < 41bp 0.763181143474972 0.511622687418331 0.6229897 0.32548106 prediction 0.503116912113283 Functional Loss - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792991 chr9:35792993 synonymous SNV . 0 23 hm5C_associated_SNPs_64759 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:35792967-35792995
64251 chr1 160388964 160388964 1 + C T LIHC 160388962 + 160388942 160388982 41 CTGGCACTGCTGTCTTTCCTCACGCCTCTGGCCTTCCTGCT CTGGCACTGCTGTCTTTCCTCATGCCTCTGGCCTTCCTGCT < 41bp 0.751547583517618 0.491098692299907 0.7459861 0.7663685 prediction 0.503095167035235 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160388962 chr1:160388964 nonsynonymous SNV 0.966 5 23 hm5C_associated_SNPs_64760 0 0 2 RBM15 POSTAR2 ENCODE chr1:160388954-160389060
64251 chr7 139102330 139102330 1 + C T UCEC 139102328 + 139102308 139102348 41 ACATCGATCTCGCTCCATGTCACGTGAACGCAAGAGGAGAA ACATCGATCTCGCTCCATGTCATGTGAACGCAAGAGGAGAA < 41bp 0.814916046334509 0.563386369221733 0.1649254 0.14953607 prediction 0.503059354225551 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139102328 chr7:139102330 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64762 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:139102281-139102404
64251 chr1 215793486 215793486 1 + G C LUAD 215793482 + 215793462 215793502 41 CAGAGAAAGTCCTTTATTAGCAAGGGCAAGAAGGACTGAGA CAGAGAAAGTCCTTTATTAGCAAGCGCAAGAAGGACTGAGA < 41bp 0.775544531204811 0.524032367993605 0.9070349 0.7204711 prediction 0.503024326422413 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215793482 chr1:215793486 nonsynonymous SNV 0.907 2 25 hm5C_associated_SNPs_64767 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:215793464-215793499
64251 chr11 397117 397117 1 + G C rs147617372 397113 + 397093 397133 41 GTGTCTGAGCAGCTGGAGCCCGCGGCCACCTCCACCTACAG GTGTCTGAGCAGCTGGAGCCCGCGCCCACCTCCACCTACAG < 41bp 0.825470929338896 0.573964722455716 0.9183581 0.8495627 prediction 0.503012413766361 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397113 chr11:397117 nonsynonymous SNV 0.013 0 25 hm5C_associated_SNPs_64769 0 0 1 FXR2 POSTAR2 ENCODE chr11:397102-397133
64251 chr12 4796211 4796211 1 + C T STAD 4796209 + 4796189 4796229 41 TTGAGGTGCTGCGGCGTCATCGCACTTACCGCTGGCTGTCT TTGAGGTGCTGCGGCGTCATCGTACTTACCGCTGGCTGTCT < 41bp 0.776925276665954 0.52542874650957 0.6673647 0.69273955 prediction 0.502993060312768 Functional Loss - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4796209 chr12:4796211 synonymous SNV . 0 23 hm5C_associated_SNPs_64770 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:4796181-4796239
64251 chr16 29824328 29824328 1 + G T SARC 29824326 + 29824306 29824346 41 TCCAGGGTTTGCCGCTGTCTCTGCTATTCCATCCTCCCCAT TCCAGGGTTTGCCGCTGTCTCTTCTATTCCATCCTCCCCAT < 41bp 0.751494536940762 0.490447721828788 0.13106862 0.047310174 prediction 0.502989073881523 Functional Loss - PRRT2 ENSG00000261962 ncRNA_intronic Human other chr16:29824326 chr16:29824328 . . 0 23 hm5C_associated_SNPs_64772 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr16:29824320-29824340
64251 chr15 69732770 69732770 1 + C T SKCM 69732768 + 69732748 69732788 41 TGAGAAGCCAGAGAGACCCTCTCGGGAGCGAGATCGAGAAA TGAGAAGCCAGAGAGACCCTCTTGGGAGCGAGATCGAGAAA < 41bp 0.751490890329426 0.46549917322953 0.27884537 0.17761377 prediction 0.502981780658852 Functional Loss - KIF23 ENSG00000137807 CDS Human protein_coding chr15:69732768 chr15:69732770 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_64773 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:69732749-69732785
64251 chr10 103919289 103919289 1 + G C LUSC 103919285 + 103919265 103919305 41 AGTGAGGATTCCTCCAGTGACGAGGAAGAGGAGCAAAAAAA AGTGAGGATTCCTCCAGTGACGAGCAAGAGGAGCAAAAAAA < 41bp 0.751468062873688 0.467204776750352 0.8799348 0.31796545 prediction 0.502936125747377 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919285 chr10:103919289 nonsynonymous SNV 0.977 3 25 hm5C_associated_SNPs_64776 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919229-103919298
64251 chr10 75550762 75550762 1 + C T COAD 75550760 + 75550740 75550780 41 AACTCCATGTATCTGTCTTCCACGGAGCCGCCAGCCGCTGC AACTCCATGTATCTGTCTTCCATGGAGCCGCCAGCCGCTGC < 41bp 0.766305950983458 0.514847802280718 0.37014887 0.41284692 prediction 0.502916297405479 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75550760 chr10:75550762 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64778 0 0 3 BUD13 POSTAR2 ENCODE chr10:75550745-75550765
64251 chr17 4799604 4799604 1 + G T THYM 4799601 + 4799581 4799621 41 TTCCATGCTGTGGATGTCGACTCGGGGAACAGCTATGACAT TTCCATGCTGTGGATGTCGACTCTGGGAACAGCTATGACAT < 41bp 0.751456440665033 0.368185022756212 0.28327018 0.10675183 prediction 0.502912881330067 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799601 chr17:4799604 synonymous SNV . 0 24 hm5C_associated_SNPs_64779 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr17:4799592-4799608
64251 chr22 29695662 29695662 1 + C T COAD 29695660 + 29695640 29695680 41 GCCTCATGGATCGTGGTGGTCCCGGTGGAATGTTCAGAGGT GCCTCATGGATCGTGGTGGTCCTGGTGGAATGTTCAGAGGT < 41bp 0.751454286747961 0.480632301158423 0.42217118 0.4148305 prediction 0.502908573495921 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695660 chr22:29695662 synonymous SNV . 0 23 hm5C_associated_SNPs_64782 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:29695600-29695680
64251 chr17 8167621 8167621 1 + A T LUSC 8167617 + 8167597 8167637 41 CCCTGCCAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTG CCCTGCCAACCCCTGTGGACCTGGTGCTCGAATGGGTGCTG < 41bp 0.871200834681932 0.619747472691799 0.12251982 0.065196574 prediction 0.502906723980266 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167617 chr17:8167621 nonsynonymous SNV 0.986 2 25 hm5C_associated_SNPs_64784 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:8167592-8167626
64251 chr7 6777129 6777129 1 + A T rs556600654 6777125 + 6777105 6777145 41 TGCAGCAGCGAGTGTGTGGCCAGCACCCCAGGGGACAGGGG TGCAGCAGCGAGTGTGTGGCCAGCTCCCCAGGGGACAGGGG < 41bp 0.751450508664663 0.454807751633171 0.15042552 0.23732933 prediction 0.502901017329327 Functional Loss - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777125 chr7:6777129 . . 0 25 hm5C_associated_SNPs_64785 0 0 1 EIF3H POSTAR2 ENCODE chr7:6777061-6777147
64251 chr7 6777127 6777127 1 + G T LUSC 6777125 + 6777105 6777145 41 TGCAGCAGCGAGTGTGTGGCCAGCACCCCAGGGGACAGGGG TGCAGCAGCGAGTGTGTGGCCATCACCCCAGGGGACAGGGG < 41bp 0.751450508664663 0.414945693446072 0.15042552 0.15428683 prediction 0.502901017329327 Functional Loss - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777125 chr7:6777127 . . 0 23 hm5C_associated_SNPs_64786 0 0 1 EIF3H POSTAR2 ENCODE chr7:6777061-6777147
64251 chr1 151259684 151259684 1 + C T SKCM 151259682 + 151259662 151259702 41 CCAGGAAGTCCCCAGAGTCCCTCTAGTGGGGCCGAGGCTGC CCAGGAAGTCCCCAGAGTCCCTTTAGTGGGGCCGAGGCTGC < 41bp 0.751448868747691 0.475809342834244 0.8963405 0.048229337 prediction 0.502897737495382 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151259682 chr1:151259684 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64787 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:151259678-151259701
64251 chr21 40823923 40823923 1 + C T SKCM 40823921 + 40823901 40823941 41 ACCCCTGGGCTGCTGCCAGCCCCGACCTGGCACTTGCTTGC ACCCCTGGGCTGCTGCCAGCCCTGACCTGGCACTTGCTTGC < 41bp 0.761007738772934 0.509559896748667 0.090656996 0.16008738 prediction 0.502895684048535 Functional Loss - SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40823921 chr21:40823923 synonymous SNV . 0 23 hm5C_associated_SNPs_64788 0 0 1 DDX3X POSTAR2 ENCODE chr21:40823878-40823960
64251 chr9 71395594 71395594 1 + C T UCEC 71395592 + 71395572 71395612 41 TGTAAGTAGCAACGGATTGCCTCCAAGCCCTATTCCCAGCC TGTAAGTAGCAACGGATTGCCTTCAAGCCCTATTCCCAGCC < 41bp 0.751446805964521 0.474987243240334 0.97455513 0.12467328 prediction 0.502893611929042 Functional Loss - FAM122A ENSG00000187866 CDS Human protein_coding chr9:71395592 chr9:71395594 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64789 0 0 3 PUM2 POSTAR2 ENCODE chr9:71395567-71395629
64251 chr19 3204605 3204605 1 + C T LUAD 3204603 + 3204583 3204623 41 CAGTTCCCTGAGGTACGGTTCTCCATGGTGCACAAGCGGAT CAGTTCCCTGAGGTACGGTTCTTCATGGTGCACAAGCGGAT < 41bp 0.805853869692945 0.554423120979487 0.9258492 0.14193746 prediction 0.502861497426916 Functional Loss - NCLN ENSG00000125912 CDS Human protein_coding chr19:3204603 chr19:3204605 nonsynonymous SNV 0.984 2 23 hm5C_associated_SNPs_64792 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:3204595-3204621
64251 chr14 39818103 39818103 1 + C T LUSC 39818101 + 39818081 39818121 41 ACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGAG ACCTCCTTTCCCCCCACCTCCTTCAGGAGCCATGTTTGGAG < 41bp 0.823569363727255 0.572154243688595 0.94967663 0.09569341 prediction 0.50283024007732 Functional Loss - MIA2 ENSG00000150527;ENSG00000258941 CDS Human other chr14:39818101 chr14:39818103 nonsynonymous SNV 0.928 2 23 hm5C_associated_SNPs_64798 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:39818098-39818131
64251 chr2 231222655 231222655 1 + G T rs10498250 231222653 + 231222633 231222673 41 TCCTTGAGGGCCTCCGCGATCGGGAACTCATCACAAATAAA TCCTTGAGGGCCTCCGCGATCGTGAACTCATCACAAATAAA < 41bp 0.751401939619894 0.422790879866698 0.82758105 0.17058304 prediction 0.502803879239787 Functional Loss - SP140L ENSG00000185404 CDS Human protein_coding chr2:231222653 chr2:231222655 synonymous SNV . 0 23 hm5C_associated_SNPs_64801 0 0 1 ZNF622 POSTAR2 ENCODE chr2:231222627-231222683
64251 chr7 55249005 55249005 1 + G T LUAD 55249003 + 55248983 55249023 41 CAGGAAGCCTACGTGATGGCCAGCGTGGACAACCCCCACGT CAGGAAGCCTACGTGATGGCCATCGTGGACAACCCCCACGT < 41bp 0.751395459510671 0.406916945994797 0.33462226 0.07835773 prediction 0.502790919021343 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55249003 chr7:55249005 nonsynonymous SNV 0.992 5 23 hm5C_associated_SNPs_64803 3 0 1 BUD13 POSTAR2 ENCODE chr7:55248940-55249065
64251 chr20 37169730 37169730 1 + G T COAD 37169727 + 37169707 37169747 41 GATTGTGGAACTGGGTATCTCAGGAAGTAAGTCCAAGAACA GATTGTGGAACTGGGTATCTCAGTAAGTAAGTCCAAGAACA < 41bp 0.751386068746312 0.370209095773751 0.8979572 0.21513528 prediction 0.502772137492623 Functional Loss - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37169727 chr20:37169730 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_64805 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr20:37169699-37169733
64251 chr15 68582588 68582588 1 + C T UCEC 68582586 + 68582566 68582606 41 TCTCGAAAAAGAGGTTCTTCCACCAATCCATGCTTATGGGA TCTCGAAAAAGAGGTTCTTCCATCAATCCATGCTTATGGGA < 41bp 0.751385074314216 0.467468817739802 0.11512911 0.065518945 prediction 0.502770148628432 Functional Loss - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68582586 chr15:68582588 nonsynonymous SNV 0.979 1 23 hm5C_associated_SNPs_64806 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr15:68582558-68582598
64251 chr4 177241318 177241318 1 + G C LUSC 177241314 + 177241294 177241334 41 ACCTTCGGCTGCTTCATCACCACCGCCTTCAAAGACAGGAG ACCTTCGGCTGCTTCATCACCACCCCCTTCAAAGACAGGAG < 41bp 0.777148418497657 0.525767465383075 0.12534198 0.06275666 prediction 0.502761906229164 Functional Loss - SPCS3 ENSG00000129128 CDS Human protein_coding chr4:177241314 chr4:177241318 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_64807 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:177241284-177241318
64251 chr11 35198159 35198159 1 + C T STAD 35198157 + 35198137 35198177 41 GCCGCTTTGCAGGTGTATTCCACGTGGAGAAAAATGGTCGC GCCGCTTTGCAGGTGTATTCCATGTGGAGAAAAATGGTCGC < 41bp 0.75134723149893 0.483355506519399 0.3870799 0.36388475 prediction 0.502694462997859 Functional Loss - CD44 ENSG00000026508 CDS Human protein_coding chr11:35198157 chr11:35198159 synonymous SNV . 0 23 hm5C_associated_SNPs_64819 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:35198140-35198160
64251 chr22 37964720 37964720 1 + G C HNSC 37964716 + 37964696 37964736 41 GCCTCCTGGGAGAGCCTGGACGAAGAGTGGAGGGCGCCCCA GCCTCCTGGGAGAGCCTGGACGAACAGTGGAGGGCGCCCCA < 41bp 0.813711299208825 0.562366888561593 0.8707907 0.59495497 prediction 0.502688821294463 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964716 chr22:37964720 nonsynonymous SNV 0.026 1 25 hm5C_associated_SNPs_64820 0 0 3 NKRF POSTAR2 ENCODE chr22:37964716-37964763
64251 chr22 35719502 35719502 1 + C T STAD 35719500 + 35719480 35719520 41 CCCTCTCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA CCCTCTCAGTCCTGGGCTGACGTGTTCCGCAGCTCGCCCGA < 41bp 0.771611635157094 0.520267332809168 0.17627198 0.14497256 prediction 0.502688604695851 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719500 chr22:35719502 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64821 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:35719487-35719521
64251 chr1 6688639 6688639 1 + C T rs138429240 6688637 + 6688617 6688657 41 AACTTCAAGCCCAAGCAGCACACGGTCATCTGCTCCGAGCA AACTTCAAGCCCAAGCAGCACATGGTCATCTGCTCCGAGCA < 41bp 0.784650977661122 0.53331141201884 0.3821861 0.36438847 prediction 0.502679131284565 Functional Loss - THAP3 ENSG00000041988 CDS Human protein_coding chr1:6688637 chr1:6688639 nonsynonymous SNV 0.977 3 23 hm5C_associated_SNPs_64824 0 0 3 GRWD1 POSTAR2 ENCODE chr1:6688568-6688717
64251 chr7 127231142 127231142 1 + G T ESCA 127231139 + 127231119 127231159 41 CTACAGCACTTACGCAGCCGCACGGTAGGGGTCCTGCCCAC CTACAGCACTTACGCAGCCGCACTGTAGGGGTCCTGCCCAC < 41bp 0.919400123915958 0.668064018266863 0.14298692 0.013406843 prediction 0.502672211298189 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231139 chr7:127231142 synonymous SNV . 0 24 hm5C_associated_SNPs_64825 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:127231125-127231142
64251 chr16 28834643 28834643 1 + G T GBM 28834641 + 28834621 28834661 41 AGCAGCCGCCCCCCACGCAACAGGCCGTGGCCCGTCGGCCC AGCAGCCGCCCCCCACGCAACATGCCGTGGCCCGTCGGCCC < 41bp 0.751309831844191 0.416571149698871 0.6736959 0.18862563 prediction 0.502619663688381 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28834641 chr16:28834643 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_64832 0 0 1 METAP2 POSTAR2 ENCODE chr16:28834502-28834645
64251 chr10 5953002 5953002 1 + G T HNSC 5952999 + 5952979 5953019 41 TGCCTCCGGAGACCCAGCTCCACGGTGACCATGCCAGATGT TGCCTCCGGAGACCCAGCTCCACTGTGACCATGCCAGATGT < 41bp 0.751292178424434 0.346197701298418 0.83020496 0.17856961 prediction 0.502584356848868 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5952999 chr10:5953002 synonymous SNV . 0 24 hm5C_associated_SNPs_64836 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:5952961-5953003
64251 chr6 155148320 155148320 1 + C T LUSC 155148318 + 155148298 155148338 41 CTGTCTAGGTTTCATGCCGCCTCCAGTTCCCCCACCTGTTG CTGTCTAGGTTTCATGCCGCCTTCAGTTCCCCCACCTGTTG < 41bp 0.75128277059542 0.457499030201723 0.9001068 0.10370651 prediction 0.502565541190841 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155148318 chr6:155148320 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_64839 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:155148319-155148320
64251 chr3 10242114 10242114 1 + A C UCEC 10242110 + 10242090 10242130 41 CTTCCCTGACTCTGTGAAGCCAGAAAAGCCTTTGGCAGCTT CTTCCCTGACTCTGTGAAGCCAGACAAGCCTTTGGCAGCTT < 41bp 0.751277756132962 0.335676953692562 0.37301356 0.320961 prediction 0.502555512265924 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10242110 chr3:10242114 nonsynonymous SNV 0.395 0 25 hm5C_associated_SNPs_64840 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:10242112-10242133
64251 chr3 10183846 10183846 1 + G T LUAD 10183843 + 10183823 10183863 41 TACCCAACGCTGCCGCCTGGCACGGGCCGCCGCATCCACAG TACCCAACGCTGCCGCCTGGCACTGGCCGCCGCATCCACAG < 41bp 0.904777353308 0.653499875841461 0.1347633 0.18823835 prediction 0.502554954933078 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10183843 chr3:10183846 synonymous SNV . 0 24 hm5C_associated_SNPs_64841 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:10183828-10183855
64251 chr1 114442672 114442672 1 - G A rs142732858 114442674 - 114442654 114442694 41 AAAAAGTTTTTTTGCTCCTACTCGGAGCCCCACTACATCAA AAAAAGTTTTTTTGCTCCTACTTGGAGCCCCACTACATCAA < 41bp 0.751248649033115 0.469425440266551 0.058849514 0.047132343 prediction 0.502497298066231 Functional Loss - AP4B1 ENSG00000134262 CDS Human protein_coding chr1:114442674 chr1:114442672 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64847 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:114442660-114442680
64251 chr19 45854274 45854274 1 + A C rs201136879 45854273 + 45854253 45854293 41 CTCCAAGGGCTCCTGGGACTCAGGTGAGGGGGACATCTGGG CTCCAAGGGCTCCTGGGACTCCGGTGAGGGGGACATCTGGG < 41bp 0.751237012180803 0.489418282589385 0.94268703 0.8403699 prediction 0.502474024361605 Functional Loss - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45854273 chr19:45854274 nonsynonymous SNV 0.687 3 22 hm5C_associated_SNPs_64850 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:45854242-45854275
64251 chr19 45854275 45854275 1 + G T STAD 45854273 + 45854253 45854293 41 CTCCAAGGGCTCCTGGGACTCAGGTGAGGGGGACATCTGGG CTCCAAGGGCTCCTGGGACTCATGTGAGGGGGACATCTGGG < 41bp 0.751237012180803 0.40645528346162 0.94268703 0.8248261 prediction 0.502474024361605 Functional Loss - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45854273 chr19:45854275 nonsynonymous SNV 0.745 3 23 hm5C_associated_SNPs_64851 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:45854242-45854275
64251 chr3 133524709 133524709 1 + C T BLCA 133524707 + 133524687 133524727 41 TCATCCATGGCTTCCGCGGACTCGCGCCGGGTGGCAGATGG TCATCCATGGCTTCCGCGGACTTGCGCCGGGTGGCAGATGG < 41bp 0.751236673214038 0.494173533594284 0.31276995 0.39443243 prediction 0.502473346428077 Functional Loss - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133524707 chr3:133524709 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_64852 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:133524665-133524719
64251 chr19 42411462 42411462 1 + A T rs564469141 42411458 + 42411438 42411478 41 TCTGCTTGGGGGACTCAGGGCTCCATTCTGGAGGGCACCAC TCTGCTTGGGGGACTCAGGGCTCCTTTCTGGAGGGCACCAC < 41bp 0.751221775443266 0.428966296989222 0.8622039 0.17496115 prediction 0.502443550886531 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42411458 chr19:42411462 nonsynonymous SNV 0.789 3 25 hm5C_associated_SNPs_64854 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:42411441-42411467
64251 chr2 89028831 89028831 1 + C T LUSC 89028829 + 89028809 89028849 41 TCCTGCAGTATGGCTTGACCCTCAGTGATCTGGATCGACAC TCCTGCAGTATGGCTTGACCCTTAGTGATCTGGATCGACAC < 41bp 0.821811816838865 0.570598181646641 0.10225433 0.031655997 prediction 0.502427270384449 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:89028829 chr2:89028831 synonymous SNV . 0 23 hm5C_associated_SNPs_64856 0 0 1 PPIG POSTAR2 ENCODE chr2:89028800-89028874
64251 chr9 96415638 96415638 1 + C T GBM 96415636 + 96415616 96415656 41 GGGGCGCCTCTGCCTGGTACCACGTGCTCAAGGTGAGCCAC GGGGCGCCTCTGCCTGGTACCATGTGCTCAAGGTGAGCCAC < 41bp 0.783534410803006 0.532325582908679 0.609834 0.3805865 prediction 0.502417655788653 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96415636 chr9:96415638 synonymous SNV . 0 23 hm5C_associated_SNPs_64859 0 0 2 DDX24 POSTAR2 ENCODE chr9:96415551-96415648
64251 chr16 2279646 2279646 1 + G T UCEC 2279644 + 2279624 2279664 41 GGTGGAGGCGGCCTCTCTGGCAGCAGACATCAGCCACGCAT GGTGGAGGCGGCCTCTCTGGCATCAGACATCAGCCACGCAT < 41bp 0.889265079115263 0.638076888967161 0.85726225 0.16165233 prediction 0.502376380296205 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2279644 chr16:2279646 nonsynonymous SNV 0.941 0 23 hm5C_associated_SNPs_64863 0 0 2 PPIG POSTAR2 ENCODE chr16:2279636-2279667
64251 chr10 38305807 38305807 1 + G T UCEC 38305805 + 38305785 38305825 41 TCTGAATGTTTCAGGTAGAACAGAAGTCCCAGGAGTCAGTA TCTGAATGTTTCAGGTAGAACATAAGTCCCAGGAGTCAGTA < 41bp 0.75118632739602 0.443289794237215 0.075820655 0.037440956 prediction 0.502372654792039 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38305805 chr10:38305807 nonsynonymous SNV 0.169 3 23 hm5C_associated_SNPs_64865 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:38305782-38305820
64251 chr1 93724375 93724375 1 + G T GBM 93724372 + 93724352 93724392 41 ACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCA ACGTGAAGCTCATTTAGAAGCAATAATGCAAGCAGAAATCA < 41bp 0.751183812339562 0.395100394309986 0.16305998 0.57240754 prediction 0.502367624679125 Functional Loss - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93724372 chr1:93724375 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_64866 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:93724362-93724420
64251 chr7 102109080 102109080 1 + C T STAD 102109078 + 102109058 102109098 41 GCCAGACGGGCATCGTGCTCCACAAGTACAAGGCACCCGGC GCCAGACGGGCATCGTGCTCCATAAGTACAAGGCACCCGGC < 41bp 0.788635508139307 0.53745321802793 0.1955252 0.1039536 prediction 0.502364580222756 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102109078 chr7:102109080 synonymous SNV . 0 23 hm5C_associated_SNPs_64867 0 0 2 DDX24 POSTAR2 ENCODE chr7:102109040-102109098
64251 chr10 75854054 75854054 1 + C T BRCA 75854052 + 75854032 75854072 41 GAAAGGAGATTCTCCAGAGGCTCGAGCCTTGGCCAAACAGG GAAAGGAGATTCTCCAGAGGCTTGAGCCTTGGCCAAACAGG < 41bp 0.751168719185839 0.460718646817026 0.8147821 0.67041874 prediction 0.502337438371678 Functional Loss - VCL ENSG00000035403 CDS Human protein_coding chr10:75854052 chr10:75854054 stopgain 1.000 1 23 hm5C_associated_SNPs_64870 0 0 5 DDX24 POSTAR2 ENCODE chr10:75854028-75854127
64251 chr5 41911179 41911179 1 + G T HNSC 41911177 + 41911157 41911197 41 ATTTGCTTGGGGATGAGCTACTGGAATGTCTCTCTTGGAGA ATTTGCTTGGGGATGAGCTACTTGAATGTCTCTCTTGGAGA < 41bp 0.873343304203687 0.622178849098001 0.22737205 0.08853978 prediction 0.502328910211373 Functional Loss - C5orf51 ENSG00000205765 CDS Human protein_coding chr5:41911177 chr5:41911179 synonymous SNV . 0 23 hm5C_associated_SNPs_64871 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:41911156-41911212
64251 chr12 69085781 69085781 1 + G T PRAD 69085779 + 69085759 69085799 41 GGATGACAGTAACTGGGCAGCTGCATTTTCATCACAGCGTT GGATGACAGTAACTGGGCAGCTTCATTTTCATCACAGCGTT < 41bp 0.751162108257607 0.436325169718674 0.21127635 0.15821749 prediction 0.502324216515214 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69085779 chr12:69085781 nonsynonymous SNV 0.956 1 23 hm5C_associated_SNPs_64872 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69085753-69085812
64251 chr2 9588429 9588429 1 + C T LUAD 9588427 + 9588407 9588447 41 TCACATAGAGGTTCATAATCCTCGGAATACAGAAGCAGTGA TCACATAGAGGTTCATAATCCTTGGAATACAGAAGCAGTGA < 41bp 0.751152849252847 0.472098889277665 0.29346174 0.14362863 prediction 0.502305698505694 Functional Loss - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9588427 chr2:9588429 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_64875 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:9588405-9588429
64251 chr1 229771836 229771836 1 + G T LUAD 229771833 + 229771813 229771853 41 CTGAGGCAGCCTGTGCTGGCCTCGGGCCCCTCCACGGTACT CTGAGGCAGCCTGTGCTGGCCTCTGGCCCCTCCACGGTACT < 41bp 0.751152479466925 0.348581943539274 0.30937225 0.064964116 prediction 0.502304958933851 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771833 chr1:229771836 synonymous SNV . 0 24 hm5C_associated_SNPs_64876 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:229771820-229771840
64251 chr11 70052536 70052536 1 + C T ACC 70052534 + 70052514 70052554 41 AACAGGAGTGGGGCCATGTCCCCGATGTCATGGAACTCAGA AACAGGAGTGGGGCCATGTCCCTGATGTCATGGAACTCAGA < 41bp 0.751148572034126 0.498721805654936 0.14010257 0.11789498 prediction 0.502297144068252 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70052534 chr11:70052536 nonsynonymous SNV 0.005 0 23 hm5C_associated_SNPs_64877 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:70052528-70052548
64251 chr17 18143931 18143931 1 + C T SKCM 18143929 + 18143909 18143949 41 ACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTA ACCATGTGGGCTGGCACCAACTTAGGCTCTGTGTTCGCCTA < 41bp 0.751128664471726 0.484007920769154 0.4462965 0.3145336 prediction 0.502257328943452 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18143929 chr17:18143931 nonsynonymous SNV 0.956 4 23 hm5C_associated_SNPs_64880 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18143912-18143947
64251 chr5 140044657 140044657 1 + G T SARC 140044654 + 140044634 140044674 41 TCCATCCGGCCCGTGACCTACTGGCTGCAGGGGACGTGGAC TCCATCCGGCCCGTGACCTACTGTCTGCAGGGGACGTGGAC < 41bp 0.751126204141713 0.368332354895348 0.5636392 0.26091903 prediction 0.502252408283426 Functional Loss - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140044654 chr5:140044657 nonsynonymous SNV 0.727 3 24 hm5C_associated_SNPs_64881 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:140044652-140044678
64251 chr2 63832446 63832446 1 + G T STAD 63832443 + 63832423 63832463 41 CAGCGTGGCGCTGCTGTCATCAAGGCTCGAAAACTATCCAG CAGCGTGGCGCTGCTGTCATCAATGCTCGAAAACTATCCAG < 41bp 0.914614465565511 0.663493638761065 0.556533 0.10513565 prediction 0.502241653608893 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63832443 chr2:63832446 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_64885 0 0 18 RTCB POSTAR2 GSE38201,GSM936508 chr2:63832417-63832448
64251 chr17 78938204 78938204 1 + G C rs3751936 78938200 + 78938180 78938220 41 AGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCGGC AGCTGTCACTCGCCGGGGCACGGGCCGTCGGCTGCTGCGGC < 41bp 0.817019896765357 0.565902593676188 0.94765186 0.92532855 prediction 0.502234606178338 Functional Loss - RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78938200 chr17:78938204 . . 0 25 hm5C_associated_SNPs_64886 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:78938178-78938204
64251 chr6 7247227 7247227 1 + G T LUSC 7247225 + 7247205 7247245 41 GTGGAGTCGGCCCCGGGTGCCGGGGAGGCCCCGGCGGAAAA GTGGAGTCGGCCCCGGGTGCCGTGGAGGCCCCGGCGGAAAA < 41bp 0.751112912101963 0.424183092144945 0.9093592 0.8414047 prediction 0.502225824203926 Functional Loss - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7247225 chr6:7247227 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_64888 0 0 3 EIF3H POSTAR2 ENCODE chr6:7247171-7247282
64251 chr16 88039782 88039782 1 + C T UCEC 88039780 + 88039760 88039800 41 CACGAGGACGGGGAGAGCGGCTCGGAGGCCAGCGACTCTGT CACGAGGACGGGGAGAGCGGCTTGGAGGCCAGCGACTCTGT < 41bp 0.751101395075188 0.481794932494413 0.5246221 0.21109381 prediction 0.502202790150375 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88039780 chr16:88039782 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_64892 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:88039781-88039782
64251 chr6 24412566 24412566 1 + C T STAD 24412564 + 24412544 24412584 41 AGTTGTCTGGAGAGGGTCAACTCGTTACATACCCTTTACCT AGTTGTCTGGAGAGGGTCAACTTGTTACATACCCTTTACCT < 41bp 0.819253630166659 0.568157068865716 0.025565058 0.021353304 prediction 0.502193122601885 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24412564 chr6:24412566 synonymous SNV . 0 23 hm5C_associated_SNPs_64894 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:24412548-24412584
64251 chr6 116938051 116938051 1 + G T GBM 116938048 + 116938028 116938068 41 CACCTGCTCCTGTCTCTCCGCGGGAGCCCTCTTCCTCTCCT CACCTGCTCCTGTCTCTCCGCGGTAGCCCTCTTCCTCTCCT < 41bp 0.912687707505736 0.661594475525003 0.8328943 0.19576156 prediction 0.502186463961466 Functional Loss - RSPH4A ENSG00000111834 CDS Human protein_coding chr6:116938048 chr6:116938051 stopgain 0.002 0 24 hm5C_associated_SNPs_64895 0 0 1 ELAVL1 POSTAR2 GSE29943,GSM741174 chr6:116938037-116938054
64251 chr13 26927935 26927935 1 + G T LUAD 26927932 + 26927912 26927952 41 CAAGAAGCCAGTTCAGTTACCTCGGGGAATGGTGAAGTCAC CAAGAAGCCAGTTCAGTTACCTCTGGGAATGGTGAAGTCAC < 41bp 0.751081548618494 0.369496235207395 0.30249423 0.12233022 prediction 0.502163097236989 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26927932 chr13:26927935 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_64898 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr13:26927905-26927952
64251 chr13 26927934 26927934 1 + C T SKCM 26927932 + 26927912 26927952 41 CAAGAAGCCAGTTCAGTTACCTCGGGGAATGGTGAAGTCAC CAAGAAGCCAGTTCAGTTACCTTGGGGAATGGTGAAGTCAC < 41bp 0.751081548618494 0.468737703625802 0.30249423 0.38879597 prediction 0.502163097236989 Functional Loss - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26927932 chr13:26927934 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_64899 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr13:26927905-26927952
64251 chr3 128990639 128990639 1 + G T LUSC 128990636 + 128990616 128990656 41 TGGCAGCAGTGCCAGAGTTCCGCGGTCTTGGGCCCCTCTTC TGGCAGCAGTGCCAGAGTTCCGCTGTCTTGGGCCCCTCTTC < 41bp 0.922100973086631 0.671025347916971 0.91226923 0.85261333 prediction 0.502151250339319 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128990636 chr3:128990639 nonsynonymous SNV 0.136 2 24 hm5C_associated_SNPs_64902 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:128990637-128990658
64251 chr9 140137531 140137531 1 + C T CESC 140137529 + 140137509 140137549 41 AGTACCGGGCGCTGACCGTGCCCGAGCTCACCCAGCAGATG AGTACCGGGCGCTGACCGTGCCTGAGCTCACCCAGCAGATG < 41bp 0.751050934108246 0.498435900617891 0.25953913 0.11844075 prediction 0.502101868216492 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137529 chr9:140137531 synonymous SNV . 0 23 hm5C_associated_SNPs_64908 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137480-140137540
64251 chr7 55231511 55231511 1 + G T UCEC 55231509 + 55231489 55231529 41 GGCCATGAACATCACCTGCACAGGACGGGTAAGAGCCCCTT GGCCATGAACATCACCTGCACATGACGGGTAAGAGCCCCTT < 41bp 0.751049854757318 0.41595524500191 0.26142788 0.053945035 prediction 0.502099709514637 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55231509 chr7:55231511 stopgain 0.456 1 23 hm5C_associated_SNPs_64909 0 0 1 SND1 POSTAR2 ENCODE chr7:55231460-55231517
64251 chr17 73222192 73222192 1 + T C UCEC 73222191 + 73222171 73222211 41 GTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGCA GTGAGAGCAGCCCAGAACCCCCGGACAACATCTTGTTGGCA < 41bp 0.765039680206235 0.513994409125615 0.34989527 0.39181963 prediction 0.50209054216124 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73222191 chr17:73222192 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_64910 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73222178-73222243
64251 chr19 58131694 58131694 1 + G T ESCA 58131691 + 58131671 58131711 41 ATTTTGCACCTGGATGAACACCAGGGTACACACCATGGACT ATTTTGCACCTGGATGAACACCATGGTACACACCATGGACT < 41bp 0.75104023316494 0.362405867642154 0.4586693 0.052773 prediction 0.50208046632988 Functional Loss - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58131691 chr19:58131694 nonsynonymous SNV 0.921 1 24 hm5C_associated_SNPs_64912 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:58131648-58131761
64251 chrX 51637427 51637427 1 + G C UCEC 51637426 + 51637406 51637446 41 TCAGAAAATGGACTGTGGTGCGGGCCTCCTCGGCTTCCAGG TCAGAAAATGGACTGTGGTGCCGGCCTCCTCGGCTTCCAGG < 41bp 0.751022212142026 0.437900114622919 0.8435956 0.27252686 prediction 0.502044424284052 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637426 chrX:51637427 synonymous SNV . 0 22 hm5C_associated_SNPs_64917 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:51637407-51637443
64251 chr8 145134983 145134983 1 + C T SKCM 145134981 + 145134961 145135001 41 CCTGTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCA CCTGTGAGATGGGCCTGCAGCTTCGCCAGACTTTCGAAGCA < 41bp 0.75101488128117 0.479017869872937 0.22336537 0.09122023 prediction 0.502029762562339 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145134981 chr8:145134983 synonymous SNV . 0 23 hm5C_associated_SNPs_64919 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:145134955-145135005
64251 chr14 68112474 68112474 1 + C T BLCA 68112472 + 68112452 68112492 41 TTACCACTTCATCAGGAAATCTCCATGGACAGCCAGTTTCA TTACCACTTCATCAGGAAATCTTCATGGACAGCCAGTTTCA < 41bp 0.842847392554524 0.59183634631289 0.9710487 0.123398095 prediction 0.502022092483267 Functional Loss - ARG2 ENSG00000081181 CDS Human protein_coding chr14:68112472 chr14:68112474 synonymous SNV . 0 23 hm5C_associated_SNPs_64920 0 0 4 IGF2BP1 POSTAR2 ENCODE chr14:68112473-68112520
64251 chr19 58048712 58048712 1 + A C rs541704077 58048708 + 58048688 58048728 41 TGTGAGATGTGTATCCTGGTCATGAAAGACATTTTGTACCT TGTGAGATGTGTATCCTGGTCATGCAAGACATTTTGTACCT < 41bp 0.751008700519063 0.357101389633881 0.24481109 0.12875003 prediction 0.502017401038126 Functional Loss - ZNF549 ENSG00000121406 CDS Human protein_coding chr19:58048708 chr19:58048712 nonsynonymous SNV 0.037 2 25 hm5C_associated_SNPs_64921 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58048674-58048734
64251 chr1 65858334 65858334 1 + A C LUAD 65858330 + 65858310 65858350 41 CCTTTTGGGCCTGGAAGGGTCTGCAATGAGTAACAGCTTCT CCTTTTGGGCCTGGAAGGGTCTGCCATGAGTAACAGCTTCT < 41bp 0.751003958760217 0.317311617945464 0.1671119 0.052114606 prediction 0.502007917520435 Functional Loss - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65858330 chr1:65858334 synonymous SNV . 0 25 hm5C_associated_SNPs_64922 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:65858308-65858337
64251 chr17 46928470 46928470 1 + A C UCEC 46928466 + 46928446 46928486 41 TATAGGAGGAGCTAGAAACCCTACAGAGCATCAATAAGAAG TATAGGAGGAGCTAGAAACCCTACCGAGCATCAATAAGAAG < 41bp 0.751000370947841 0.324865038457666 0.2895119 0.086040914 prediction 0.502000741895682 Functional Loss - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46928466 chr17:46928470 nonsynonymous SNV 0.682 1 25 hm5C_associated_SNPs_64923 0 0 2 UCHL5 POSTAR2 ENCODE chr17:46928451-46928485
64251 chr1 146747042 146747042 1 + A T UCEC 146747038 + 146747018 146747058 41 TGGAGTTGGCATGAACTTAACAGCAGCAGATACTGTGATTT TGGAGTTGGCATGAACTTAACAGCTGCAGATACTGTGATTT < 41bp 0.750990184309253 0.44138056115057 0.35577694 0.20256343 prediction 0.501980368618505 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146747038 chr1:146747042 synonymous SNV . 0 25 hm5C_associated_SNPs_64925 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:146747015-146747118
64251 chr5 137680742 137680742 1 + C T LUSC 137680740 + 137680720 137680760 41 AAGAGGCACTGCCGCTCACTCTCAGTGCCCGTGGACCTGTC AAGAGGCACTGCCGCTCACTCTTAGTGCCCGTGGACCTGTC < 41bp 0.787485151788158 0.536502577843841 0.2792961 0.3958882 prediction 0.501965147888635 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680740 chr5:137680742 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64927 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137680708-137680743
64251 chr3 50211374 50211374 1 + C T BRCA 50211372 + 50211352 50211392 41 TGGACCTGCACGACATCAACCGCGAGCCCCTCATTGTAAGG TGGACCTGCACGACATCAACCGTGAGCCCCTCATTGTAAGG < 41bp 0.750976230764632 0.479014715013384 0.20192477 0.102353245 prediction 0.501952461529263 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50211372 chr3:50211374 synonymous SNV . 0 23 hm5C_associated_SNPs_64931 0 0 1 GRWD1 POSTAR2 ENCODE chr3:50211258-50211376
64251 chr3 10291011 10291011 1 + G T SARC 10291009 + 10290989 10291029 41 CAGCCGGCCAGCTCAGAGGTCTGCGTCGCGTTCTGGAGGGC CAGCCGGCCAGCTCAGAGGTCTTCGTCGCGTTCTGGAGGGC < 41bp 0.750956309569651 0.399001964292797 0.3573472 0.41048634 prediction 0.501912619139302 Functional Loss - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10291009 chr3:10291011 nonsynonymous SNV 0.074 1 23 hm5C_associated_SNPs_64939 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr3:10291000-10291020
64251 chr6 41076090 41076090 1 + G T SARC 41076088 + 41076068 41076108 41 AGGTTATTGTTGGAGATGAGCGGCAGCAATACCTCTTGGTG AGGTTATTGTTGGAGATGAGCGTCAGCAATACCTCTTGGTG < 41bp 0.750954865586713 0.422454272457503 0.8521651 0.40751338 prediction 0.501909731173427 Functional Loss - ADCY10P1 ENSG00000161912 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:41076088 chr6:41076090 . . 0 23 hm5C_associated_SNPs_64941 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:41076062-41076097
64251 chr17 80320388 80320388 1 + C T SKCM 80320386 + 80320366 80320406 41 GGTCTGGACCCCCACTTTGTCCCCACTGAACTATGGCCTCA GGTCTGGACCCCCACTTTGTCCTCACTGAACTATGGCCTCA < 41bp 0.787260445280919 0.536309073120684 0.03355941 0.0531269 prediction 0.501902744320469 Functional Loss - TEX19 ENSG00000182459 CDS Human protein_coding chr17:80320386 chr17:80320388 nonsynonymous SNV 0.475 1 23 hm5C_associated_SNPs_64943 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:80320367-80320392
64251 chr2 239002529 239002529 1 + G C BLCA 239002525 + 239002505 239002545 41 GCGGAGCTGGTGACCCAGAACTGCGAGGCTTATGAGGCCCA GCGGAGCTGGTGACCCAGAACTGCCAGGCTTATGAGGCCCA < 41bp 0.829304542266122 0.57836044889891 0.33942246 0.104412794 prediction 0.501888186734424 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:239002525 chr2:239002529 nonsynonymous SNV 0.100 0 25 hm5C_associated_SNPs_64944 0 0 3 PPIG POSTAR2 ENCODE chr2:239002494-239002596
64251 chr14 101200802 101200802 1 + G T PAAD 101200800 + 101200780 101200820 41 TCTGTGCAAGCCCGAGTTCACAGGTCTCACCTGTGTCAAGA TCTGTGCAAGCCCGAGTTCACATGTCTCACCTGTGTCAAGA < 41bp 0.892915504596179 0.641972694506189 0.6756773 0.14710838 prediction 0.501885620179979 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200800 chr14:101200802 nonsynonymous SNV 0.049 5 23 hm5C_associated_SNPs_64945 0 0 6 RPS3 POSTAR2 ENCODE chr14:101200785-101200923
64251 chr7 66104107 66104107 1 + C T LUSC 66104105 + 66104085 66104125 41 CACTGCCTGGTCACGGACCTCTCGGCCCAGGGTCTCACCGT CACTGCCTGGTCACGGACCTCTTGGCCCAGGGTCTCACCGT < 41bp 0.797856943993183 0.546927256720506 0.49886614 0.230304 prediction 0.501859374545355 Functional Loss - KCTD7 ENSG00000243335 CDS Human protein_coding chr7:66104105 chr7:66104107 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_64950 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:66104081-66104108
64251 chr5 68805645 68805645 1 + A T UCEC 68805641 + 68805621 68805661 41 ACTACTGTGTTGTGGATCCCCAGGAGGTATGAGTGGTGTTT ACTACTGTGTTGTGGATCCCCAGGTGGTATGAGTGGTGTTT < 41bp 0.846526047776085 0.595617036072483 0.8712381 0.8172319 prediction 0.501818023407203 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68805641 chr5:68805645 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_64956 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68805616-68805647
64251 chr19 18047332 18047332 1 + G T ESCA 18047329 + 18047309 18047349 41 ATGCCAAGAAGCAGAAGGAGCTGGAGGATGCCTACTGGAAG ATGCCAAGAAGCAGAAGGAGCTGTAGGATGCCTACTGGAAG < 41bp 0.909472016526996 0.658569424479335 0.3771361 0.21664631 prediction 0.501805184095322 Functional Loss - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18047329 chr19:18047332 stopgain 1.000 1 24 hm5C_associated_SNPs_64960 0 0 16 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:18047302-18047338
64251 chr8 128752935 128752935 1 + G C LUAD 128752934 + 128752914 128752954 41 AGCCCCAGGTCCTCGGACACCGAGGAGAATGTCAAGAGGCG AGCCCCAGGTCCTCGGACACCCAGGAGAATGTCAAGAGGCG < 41bp 0.750893628426684 0.43922773618895 0.79172873 0.3696288 prediction 0.501787256853368 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128752934 chr8:128752935 nonsynonymous SNV 0.987 5 22 hm5C_associated_SNPs_64963 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:128752920-128752940
64251 chr9 131755506 131755506 1 + G T COAD 131755503 + 131755483 131755523 41 CAATGTCAGTGTATGCTTGTCTGGGCAATGATGCGGCTGCC CAATGTCAGTGTATGCTTGTCTGTGCAATGATGCGGCTGCC < 41bp 0.750887367836877 0.35628087710092 0.7657771 0.27144033 prediction 0.501774735673755 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131755503 chr9:131755506 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_64964 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131755485-131755513
64251 chr17 1678395 1678395 1 + G T UCEC 1678392 + 1678372 1678412 41 GACTCCAGAAAGACTTCCCTCGAGGATTTCTACTTGGATGA GACTCCAGAAAGACTTCCCTCGATGATTTCTACTTGGATGA < 41bp 0.750885292595794 0.352781994464319 0.8978681 0.1263834 prediction 0.501770585191587 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1678392 chr17:1678395 nonsynonymous SNV 0.897 1 24 hm5C_associated_SNPs_64965 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:1678380-1678409
64251 chr4 83375948 83375948 1 + G T LUAD 83375946 + 83375926 83375966 41 GAAGGTGTACATCTATTCCTCAGGGAGTGTGGAGGCACAGA GAAGGTGTACATCTATTCCTCATGGAGTGTGGAGGCACAGA < 41bp 0.881455075881148 0.630571726853369 0.82951355 0.1962181 prediction 0.501766698055556 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83375946 chr4:83375948 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_64967 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:83375933-83375965
64251 chr19 10747165 10747165 1 + C T PRAD 10747163 + 10747143 10747183 41 GTGCTGGCGCTGGGCCAGGTCACGCTGGCCGGGGCCTTTGC GTGCTGGCGCTGGGCCAGGTCATGCTGGCCGGGGCCTTTGC < 41bp 0.781676415160195 0.530795099961314 0.31211758 0.28006628 prediction 0.501762630397762 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10747163 chr19:10747165 nonsynonymous SNV 0.839 4 23 hm5C_associated_SNPs_64969 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:10747126-10747179
64251 chr2 176984454 176984454 1 + A T rs13403839 176984450 + 176984430 176984470 41 AAAAAAAGATTAAGAAAACCCACAAGTTGGAGGGAGGGGGA AAAAAAAGATTAAGAAAACCCACATGTTGGAGGGAGGGGGA < 41bp 0.750872753609177 0.478375318413388 0.12583119 0.12672979 prediction 0.501745507218353 Functional Loss - HOXD10 ENSG00000128710 UTR3 Human protein_coding chr2:176984450 chr2:176984454 . . 0 25 hm5C_associated_SNPs_64974 1 0 14 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:176984400-176984480
64251 chr17 40120250 40120250 1 + C T rs138346889 40120248 + 40120228 40120268 41 GCAAGACGCTCTTCATCTTGCGCGGCCTGCCAGGAAGCGGC GCAAGACGCTCTTCATCTTGCGTGGCCTGCCAGGAAGCGGC < 41bp 0.750872557838431 0.495350501885124 0.5615769 0.65703166 prediction 0.501745115676862 Functional Loss - CNP ENSG00000173786 CDS Human protein_coding chr17:40120248 chr17:40120250 synonymous SNV . 0 23 hm5C_associated_SNPs_64975 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:40120235-40120256
64251 chr8 86385979 86385979 1 + G T LUAD 86385977 + 86385957 86385997 41 TTGATTCAGTTTCACTTTCACTGGGGTTCACTTGATGGACA TTGATTCAGTTTCACTTTCACTTGGGTTCACTTGATGGACA < 41bp 0.878172625048358 0.627304422936801 0.4763093 0.15409252 prediction 0.501736404223114 Functional Loss - CA2 ENSG00000104267 CDS Human protein_coding chr8:86385977 chr8:86385979 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_64977 0 0 9 TARDBP POSTAR2 DRA001158,DRS012385 chr8:86385959-86386009
64251 chr6 147525742 147525742 1 + A T ESCA 147525738 + 147525718 147525758 41 CGTCCTCGGCGTCGCAGCAGCAACAGCAGCAGCATCCGCCT CGTCCTCGGCGTCGCAGCAGCAACTGCAGCAGCATCCGCCT < 41bp 0.750864146426373 0.44564145832864 0.22749376 0.3984205 prediction 0.501728292852746 Functional Loss - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147525738 chr6:147525742 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_64978 0 0 3 GRWD1 POSTAR2 ENCODE chr6:147525656-147525858
64251 chr19 57931823 57931823 1 + G T UCEC 57931821 + 57931801 57931841 41 AGGCTCACCTTGTTGGTCACCAGAAAATTCATACTGGAGAA AGGCTCACCTTGTTGGTCACCATAAAATTCATACTGGAGAA < 41bp 0.75086256081283 0.405822917914458 0.2956625 0.115125746 prediction 0.50172512162566 Functional Loss - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57931821 chr19:57931823 nonsynonymous SNV 0.161 1 23 hm5C_associated_SNPs_64979 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:57931820-57931840
64251 chr19 19312496 19312496 1 - C G rs1802498 19312500 - 19312480 19312520 41 GGTCAGCGGGCACCAGGTTGCTCTGGAAGAGCTTGAGGATG GGTCAGCGGGCACCAGGTTGCTCTCGAAGAGCTTGAGGATG < 41bp 0.750859707900657 0.483890174130437 0.61923337 0.6027672 prediction 0.501719415801314 Functional Loss - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19312500 chr19:19312496 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_64981 1 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19312483-19312503
64251 chr21 34922706 34922706 1 + C T SKCM 34922704 + 34922684 34922724 41 TTGCCGGGGCCACCTGCGACCTCCATGCCGGAGTTGCAGGG TTGCCGGGGCCACCTGCGACCTTCATGCCGGAGTTGCAGGG < 41bp 0.809095924737766 0.558241555062854 0.9527339 0.5195066 prediction 0.501708739349823 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922704 chr21:34922706 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_64983 0 0 31 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34922290-34922710
64251 chr19 49510571 49510571 1 + G C LUAD 49510567 + 49510547 49510587 41 CTCTCTGGCTAGGGAGGAGACGGAGATCATCGAAGGGGAGG CTCTCTGGCTAGGGAGGAGACGGACATCATCGAAGGGGAGG < 41bp 0.750853307445875 0.456688058582908 0.90625894 0.60722464 prediction 0.50170661489175 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49510567 chr19:49510571 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_64984 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:49510560-49510580
64251 chr10 99995908 99995908 1 + G T rs182012480 99995906 + 99995886 99995926 41 GAGAAGCAGAGCTCAAGAAACTGCAAGAAGCCAGAGGTGAG GAGAAGCAGAGCTCAAGAAACTTCAAGAAGCCAGAGGTGAG < 41bp 0.750831417959377 0.432490977775201 0.8099171 0.16406566 prediction 0.501662835918753 Functional Loss - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99995906 chr10:99995908 synonymous SNV . 0 23 hm5C_associated_SNPs_64989 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:99995880-99995913
64251 chr15 41023339 41023339 1 + C T UCEC 41023337 + 41023317 41023357 41 CCTGAAGCTGAAGCTATGTTCGCCATTAATGCAGATGGAGT CCTGAAGCTGAAGCTATGTTCGTCATTAATGCAGATGGAGT < 41bp 0.750830584147647 0.477640488211117 0.12264019 0.0921098 prediction 0.501661168295294 Functional Loss - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41023337 chr15:41023339 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_64990 0 0 1 DDX55 POSTAR2 ENCODE chr15:41023252-41023363
64251 chr1 160388965 160388965 1 + G A PRAD 160388962 + 160388942 160388982 41 CTGGCACTGCTGTCTTTCCTCACGCCTCTGGCCTTCCTGCT CTGGCACTGCTGTCTTTCCTCACACCTCTGGCCTTCCTGCT < 41bp 0.751547583517618 0.500725482710842 0.7459861 0.40643477 prediction 0.501644201613551 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160388962 chr1:160388965 synonymous SNV . 0 24 hm5C_associated_SNPs_64996 0 0 2 RBM15 POSTAR2 ENCODE chr1:160388954-160389060
64251 chr7 100799970 100799970 1 + C T rs77387752 100799968 + 100799948 100799988 41 AGGAACGGAAGAAGATGGTGCGCGAGCTCATGCAGGTTGTC AGGAACGGAAGAAGATGGTGCGTGAGCTCATGCAGGTTGTC < 41bp 0.799201873575355 0.548384197933457 0.38037568 0.22209167 prediction 0.501635351283796 Functional Loss - AP1S1 ENSG00000106367 CDS Human protein_coding chr7:100799968 chr7:100799970 synonymous SNV . 0 23 hm5C_associated_SNPs_64997 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100799958-100800039
64251 chr8 104064992 104064992 1 + C T GBM 104064990 + 104064970 104065010 41 GATTGATAATGACCTGAAATCTCGAGCATCTGCATACAATA GATTGATAATGACCTGAAATCTTGAGCATCTGCATACAATA < 41bp 0.836458625388994 0.585662188326876 0.57382435 0.09276748 prediction 0.501592874124235 Functional Loss - ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104064990 chr8:104064992 stopgain 0.997 1 23 hm5C_associated_SNPs_65005 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr8:104064962-104064993
64251 chrX 70514332 70514332 1 + C T UCEC 70514330 + 70514310 70514350 41 GTTCTCAGGGAAGCCAGCTGCTCGGAAAGCTCTGGACAGAT GTTCTCAGGGAAGCCAGCTGCTTGGAAAGCTCTGGACAGAT < 41bp 0.819159214329642 0.568369247850879 0.7592574 0.5966357 prediction 0.501579932957525 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70514330 chrX:70514332 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_65006 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:70514279-70514333
64251 chr1 166818200 166818200 1 + T C SARC 166818199 + 166818179 166818219 41 TGAAGAATCTGACGTAAAGCCTCCAGACTGGCCAAACCCAA TGAAGAATCTGACGTAAAGCCCCCAGACTGGCCAAACCCAA < 41bp 0.750781971086265 0.490771804735813 0.95491946 0.09668055 prediction 0.50156394217253 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818199 chr1:166818200 synonymous SNV . 0 22 hm5C_associated_SNPs_65007 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:166818176-166818214
64251 chr20 44463081 44463081 1 + G C rs150979976 44463077 + 44463057 44463097 41 CTGGCCCTGACCAGCTGCCCCTCGGGGATGGGACGTCAGGA CTGGCCCTGACCAGCTGCCCCTCGCGGATGGGACGTCAGGA < 41bp 0.801355733352758 0.55058259108222 0.19546199 0.2297126 prediction 0.501546284541076 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44463077 chr20:44463081 nonsynonymous SNV 0.309 2 25 hm5C_associated_SNPs_65008 0 0 1 GRWD1 POSTAR2 ENCODE chr20:44462987-44463090
64251 chr12 20786672 20786672 1 + G T SARC 20786670 + 20786650 20786690 41 GGAATCCTGCTGATGAGCCCCTGGAGAGAAGTGGGGTAGCC GGAATCCTGCTGATGAGCCCCTTGAGAGAAGTGGGGTAGCC < 41bp 0.750749908934665 0.414584526187329 0.20517871 0.052314818 prediction 0.50149981786933 Functional Loss - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20786670 chr12:20786672 synonymous SNV . 0 23 hm5C_associated_SNPs_65013 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:20786637-20786675
64251 chr2 70315942 70315942 1 + G T PAAD 70315940 + 70315920 70315960 41 TCTGAGAAGGGCATGGGGTGCAGCTAGAACAGTGTAGGTTC TCTGAGAAGGGCATGGGGTGCATCTAGAACAGTGTAGGTTC < 41bp 0.75074807789782 0.423974287082543 0.09509495 0.08950311 prediction 0.501496155795641 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315940 chr2:70315942 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_65015 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:70315858-70315961
64251 chr9 110068723 110068723 1 + G T UCEC 110068721 + 110068701 110068741 41 GTCAGCTCCTGCCAGCACTACAGCAGTTACTTCCTCCACCA GTCAGCTCCTGCCAGCACTACATCAGTTACTTCCTCCACCA < 41bp 0.88285803831682 0.632125224817283 0.39600033 0.07687956 prediction 0.501465626999074 Functional Loss - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068721 chr9:110068723 nonsynonymous SNV 0.030 0 23 hm5C_associated_SNPs_65018 0 0 15 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:110068700-110068740
64251 chr14 77579910 77579910 1 + C T UCEC 77579908 + 77579888 77579928 41 ACTGGTGAGAAAAAGTCCGACTCCAGGAACTACTTGCCCAT ACTGGTGAGAAAAAGTCCGACTTCAGGAACTACTTGCCCAT < 41bp 0.750731067928748 0.464553498570261 0.92328614 0.11676657 prediction 0.501462135857495 Functional Loss - CIPC ENSG00000198894 CDS Human protein_coding chr14:77579908 chr14:77579910 nonsynonymous SNV 0.991 2 23 hm5C_associated_SNPs_65019 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:77579902-77579935
64251 chr11 57559064 57559064 1 + G T LUSC 57559061 + 57559041 57559081 41 GAGGAGGAACGGCGCCACGTCTCGGCGCAGCTGGAACGCGT GAGGAGGAACGGCGCCACGTCTCTGCGCAGCTGGAACGCGT < 41bp 0.901106496231812 0.650378428642138 0.32584992 0.2057276 prediction 0.501456135179349 Functional Loss - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57559061 chr11:57559064 synonymous SNV . 0 24 hm5C_associated_SNPs_65020 0 0 3 GRWD1 POSTAR2 ENCODE chr11:57559058-57559141
64251 chr6 80745093 80745093 1 + G T LUSC 80745091 + 80745071 80745111 41 CCATGGGAACGCAAGAGTTACTGGAAAAATATGTTAGAGGC CCATGGGAACGCAAGAGTTACTTGAAAAATATGTTAGAGGC < 41bp 0.852281833628553 0.60158719746379 0.44225043 0.3090453 prediction 0.501389272329527 Functional Loss - TTK ENSG00000112742 CDS Human protein_coding chr6:80745091 chr6:80745093 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_65031 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:80745056-80745108
64251 chr19 49464129 49464129 1 + C T BLCA 49464127 + 49464107 49464147 41 TGGGCTGGACATTGGACTTCCTCCGGGAGCGGCTGTTGGGC TGGGCTGGACATTGGACTTCCTTCGGGAGCGGCTGTTGGGC < 41bp 0.750686302831712 0.475576477939575 0.301431 0.19746462 prediction 0.501372605663424 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464127 chr19:49464129 synonymous SNV . 0 23 hm5C_associated_SNPs_65033 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49464064-49464179
64251 chr19 49464131 49464131 1 + G C LUSC 49464127 + 49464107 49464147 41 TGGGCTGGACATTGGACTTCCTCCGGGAGCGGCTGTTGGGC TGGGCTGGACATTGGACTTCCTCCCGGAGCGGCTGTTGGGC < 41bp 0.750686302831712 0.471996773066955 0.301431 0.11038357 prediction 0.501372605663424 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464127 chr19:49464131 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_65034 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49464064-49464179
64251 chr2 198571068 198571068 1 + C T LUSC 198571066 + 198571046 198571086 41 ATATCATAGGTAAGGACATTCTCAAATTCCATGCCATCTAT ATATCATAGGTAAGGACATTCTTAAATTCCATGCCATCTAT < 41bp 0.750678038918859 0.483339839349825 0.8871614 0.13528681 prediction 0.501356077837717 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571066 chr2:198571068 synonymous SNV . 0 23 hm5C_associated_SNPs_65037 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:198570961-198571099
64251 chr15 96875553 96875553 1 + G T PAAD 96875551 + 96875531 96875571 41 CGGGTAGCGACAAGCAGCAGCAGCAGCAACACATCGAGTGC CGGGTAGCGACAAGCAGCAGCATCAGCAACACATCGAGTGC < 41bp 0.750676770293321 0.413568654901214 0.27353823 0.083058745 prediction 0.501353540586642 Functional Loss - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875551 chr15:96875553 nonsynonymous SNV 0.966 1 23 hm5C_associated_SNPs_65038 0 0 1 ZNF622 POSTAR2 ENCODE chr15:96875544-96875599
64251 chr16 779608 779608 1 + G T rs531236431 779605 + 779585 779625 41 GTGGGCAACCTGGTGCTTCCCGGGTGGACACACAGGACCAC GTGGGCAACCTGGTGCTTCCCGGTTGGACACACAGGACCAC < 41bp 0.859487823962965 0.608816083243513 0.8948886 0.2690601 prediction 0.501343481438904 Functional Loss - HAGHL ENSG00000103253 UTR3 Human protein_coding chr16:779605 chr16:779608 . . 0 24 hm5C_associated_SNPs_65040 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:779602-779651
64251 chr5 174156285 174156285 1 + C T BRCA 174156283 + 174156263 174156303 41 TTCCGTCAGAAACAGTACCTCTCCATTGCAGAGCGTGCAGA TTCCGTCAGAAACAGTACCTCTTCATTGCAGAGCGTGCAGA < 41bp 0.820476369122999 0.569805520766642 0.9558842 0.2644047 prediction 0.501341696712715 Functional Loss - MSX2 ENSG00000120149 CDS Human protein_coding chr5:174156283 chr5:174156285 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_65041 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:174156271-174156319
64251 chr8 87440021 87440021 1 + A C LUAD 87440017 + 87439997 87440037 41 ACCAATTGCAGGGAGCTATGCAACAGTTTAACCAACGATAC ACCAATTGCAGGGAGCTATGCAACCGTTTAACCAACGATAC < 41bp 0.750664258929253 0.340686079575396 0.08934036 0.08753803 prediction 0.501328517858506 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87440017 chr8:87440021 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_65043 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:87439980-87440021
64251 chrX 54841815 54841815 1 + C T BRCA 54841813 + 54841793 54841833 41 GAGCTCGAATGGGCATTGGGCTCGGCTCGGAGAATGCTGCC GAGCTCGAATGGGCATTGGGCTTGGCTCGGAGAATGCTGCC < 41bp 0.788918544352817 0.538259685563509 0.4248522 0.29248625 prediction 0.501317717578614 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841813 chrX:54841815 synonymous SNV . 0 23 hm5C_associated_SNPs_65045 0 0 5 FMR1 POSTAR2 ENCODE chrX:54841808-54841852
64251 chr7 150767073 150767073 1 + G T LUAD 150767070 + 150767050 150767090 41 TCTGGACCAGCAGACCCTGCCCGGAGTGGCCCACCAGGTGG TCTGGACCAGCAGACCCTGCCCGTAGTGGCCCACCAGGTGG < 41bp 0.750649249829247 0.34808908921469 0.8154757 0.15051353 prediction 0.501298499658493 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150767070 chr7:150767073 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_65047 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150767033-150767073
64251 chr6 26104300 26104300 1 + G T LUSC 26104298 + 26104278 26104318 41 ATTCGCCGTTTGGCTCGGCGCGGTGGCGTCAAGCGCATTTC ATTCGCCGTTTGGCTCGGCGCGTTGGCGTCAAGCGCATTTC < 41bp 0.883170217238333 0.632524196833198 0.34317023 0.14233312 prediction 0.50129204081027 Functional Loss - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104298 chr6:26104300 nonsynonymous SNV 0.006 2 23 hm5C_associated_SNPs_65049 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:26104160-26104340
64251 chr16 81076065 81076065 1 + C T STAD 81076063 + 81076043 81076083 41 CTCACATCTACCGAACTGGGCACGAGATACCTGCAGAACAC CTCACATCTACCGAACTGGGCATGAGATACCTGCAGAACAC < 41bp 0.797993651744564 0.547370847077138 0.3210153 0.30425817 prediction 0.501245609334853 Functional Loss - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81076063 chr16:81076065 synonymous SNV . 0 23 hm5C_associated_SNPs_65054 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr16:81076025-81076077
64251 chr8 26481822 26481822 1 + C T rs139123217 26481820 + 26481800 26481840 41 TGGAAGCGCTTGTGAAGGATCACGGTAGGTTGCACTGAGTC TGGAAGCGCTTGTGAAGGATCATGGTAGGTTGCACTGAGTC < 41bp 0.791719761790071 0.541105308301605 0.72867185 0.8269942 prediction 0.501228906976931 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26481820 chr8:26481822 synonymous SNV . 0 23 hm5C_associated_SNPs_65058 0 0 3 BUD13 POSTAR2 ENCODE chr8:26481792-26481843
64251 chr19 50295289 50295289 1 + C T UCEC 50295287 + 50295267 50295307 41 GCCCATGGGCGAGTGGACGGCGCGTGTGGTACACCTGCTCA GCCCATGGGCGAGTGGACGGCGTGTGTGGTACACCTGCTCA < 41bp 0.750610786550002 0.497241012352578 0.4442822 0.35259998 prediction 0.501221573100005 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50295287 chr19:50295289 nonsynonymous SNV 0.053 4 23 hm5C_associated_SNPs_65059 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50295271-50295303
64251 chr14 52186847 52186847 1 + C T PRAD 52186845 + 52186825 52186865 41 GGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTG GGACCAGCTGGAAAAACGGTCGTGGGCCAGCGGGAGCAGTG < 41bp 0.794625304731226 0.544025159496155 0.299323 0.36040238 prediction 0.501200290470142 Functional Loss - FRMD6 ENSG00000139926 CDS Human protein_coding chr14:52186845 chr14:52186847 nonsynonymous SNV 0.454 4 23 hm5C_associated_SNPs_65063 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:52186839-52186869
64251 chr9 35660849 35660849 1 + G T LGG 35660847 + 35660827 35660867 41 GGACAAGGATATGGAGGCTTCAGAACCAGGTGAAGGCTCGG GGACAAGGATATGGAGGCTTCATAACCAGGTGAAGGCTCGG < 41bp 0.750588234026007 0.425366544924082 0.08341807 0.0063960254 prediction 0.501176468052014 Functional Loss - CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35660847 chr9:35660849 stopgain 0.977 0 23 hm5C_associated_SNPs_65065 0 0 1 DDX3X POSTAR2 ENCODE chr9:35660833-35660868
64251 chr15 57524981 57524981 1 + C T GBM 57524979 + 57524959 57524999 41 CACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCA CACCAATGTCCAGCTTTCATCGTGGCAGTACCAGCAGTTCA < 41bp 0.759595811831475 0.509024000064108 0.81351805 0.85615426 prediction 0.501143623534734 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57524979 chr15:57524981 synonymous SNV . 0 23 hm5C_associated_SNPs_65069 1 0 7 IGF2BP1 POSTAR2 ENCODE chr15:57524964-57525006
64251 chr6 54806432 54806432 1 + G T UCEC 54806429 + 54806409 54806449 41 GGCAGGAGATGCCTCTGCCCCAAGATTTAACACTGAACAGA GGCAGGAGATGCCTCTGCCCCAATATTTAACACTGAACAGA < 41bp 0.750568776724348 0.371849479536456 0.47985566 0.11229989 prediction 0.501137553448695 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54806429 chr6:54806432 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65070 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:54806404-54806432
64251 chr16 23570949 23570949 1 + G T LUAD 23570947 + 23570927 23570967 41 CACCCAAAGATGCTGCGCAGCAGGATGCAAAGGCCGAAGAG CACCCAAAGATGCTGCGCAGCATGATGCAAAGGCCGAAGAG < 41bp 0.888967651920309 0.638399081725691 0.43243784 0.05375439 prediction 0.501137140389236 Functional Loss - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23570947 chr16:23570949 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_65071 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:23570936-23570968
64251 chr5 68709914 68709914 1 + G T HNSC 68709912 + 68709892 68709932 41 GGAATGATAGACCCTGACAGCGGAGATGAAGCCCAGCTTAA GGAATGATAGACCCTGACAGCGTAGATGAAGCCCAGCTTAA < 41bp 0.750566711422583 0.445154016969961 0.87681407 0.24637467 prediction 0.501133422845166 Functional Loss - RAD17 ENSG00000152942 CDS Human protein_coding chr5:68709912 chr5:68709914 nonsynonymous SNV 0.723 4 23 hm5C_associated_SNPs_65072 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:68709892-68709916
64251 chr7 36324326 36324326 1 + C T COAD 36324324 + 36324304 36324344 41 TATGCAGGATTCCTATGGGACGCGGCTGCCGGCATGGAGCT TATGCAGGATTCCTATGGGACGTGGCTGCCGGCATGGAGCT < 41bp 0.765021382416052 0.514455877346725 0.19086838 0.2509385 prediction 0.501131010138653 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36324324 chr7:36324326 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_65074 0 0 3 GRWD1 POSTAR2 ENCODE chr7:36324306-36324390
64251 chr11 607682 607682 1 + G C COAD 607678 + 607658 607698 41 CAGCAGGGTGCCCCGGGAGCCCGGGGTGCACACGGGCAGCT CAGCAGGGTGCCCCGGGAGCCCGGCGTGCACACGGGCAGCT < 41bp 0.82118128163149 0.570625972187429 0.9183538 0.8590536 prediction 0.501110618888122 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607678 chr11:607682 synonymous SNV . 0 25 hm5C_associated_SNPs_65078 0 0 1 EIF3H POSTAR2 ENCODE chr11:607660-607689
64251 chr19 56180459 56180459 1 + G T CESC 56180456 + 56180436 56180476 41 CCTCCAAACACAGGCCATTGCGGGGCTGAACGGCATGCAGC CCTCCAAACACAGGCCATTGCGGTGCTGAACGGCATGCAGC < 41bp 0.923362543990723 0.672808777862152 0.9547491 0.57452184 prediction 0.501107532257141 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56180456 chr19:56180459 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65079 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:56180440-56180460
64251 chr12 96641447 96641447 1 + T C UCEC 96641446 + 96641426 96641466 41 CTCTCCGGCACCGACATCGGCTCCATCGCCCTCAACAGCCC CTCTCCGGCACCGACATCGGCCCCATCGCCCTCAACAGCCC < 41bp 0.798066018601655 0.547513681073146 0.7653873 0.027945846 prediction 0.50110467505702 Functional Loss - ELK3 ENSG00000111145 CDS Human protein_coding chr12:96641446 chr12:96641447 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_65080 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704218 chr12:96641440-96641460
64251 chr9 33295380 33295380 1 + C T LGG 33295378 + 33295358 33295398 41 TCAAGTAGTATCTCCTTTCTCCCGAGGCAAACAGAACCATG TCAAGTAGTATCTCCTTTCTCCTGAGGCAAACAGAACCATG < 41bp 0.750536897192562 0.478740415100411 0.41734976 0.7202943 prediction 0.501073794385124 Functional Loss - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295378 chr9:33295380 stopgain 0.975 1 23 hm5C_associated_SNPs_65086 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:33295354-33295401
64251 chr12 57921342 57921342 1 + C T UCEC 57921340 + 57921320 57921360 41 CCACCTACCTCCAGTGTCACCACGGCAACTACTGACCCGGG CCACCTACCTCCAGTGTCACCATGGCAACTACTGACCCGGG < 41bp 0.768811252454378 0.518320830212425 0.37551332 0.39907128 prediction 0.500980844483907 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921340 chr12:57921342 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_65099 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:57921340-57921360
64251 chr11 134131678 134131678 1 + C T COAD 134131676 + 134131656 134131696 41 ATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAA ATGGCAACAAGGCTGGTGGCCGTGCGGCTGATGGTCCGCAA < 41bp 0.78785755970856 0.537387758298239 0.7491735 0.41072828 prediction 0.500939602820641 Functional Loss - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134131676 chr11:134131678 nonsynonymous SNV 0.714 4 23 hm5C_associated_SNPs_65102 0 0 1 PPIG POSTAR2 ENCODE chr11:134131656-134131724
64251 chr2 113317046 113317046 1 + C T SKCM 113317044 + 113317024 113317064 41 CTTCCTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGTG CTTCCTTTGTCCCGTGCATACCTCAGACGGGGAGCCCTGTG < 41bp 0.750448496301391 0.458190852187292 0.12086302 0.1448487 prediction 0.500896992602782 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113317044 chr2:113317046 nonsynonymous SNV 0.985 5 23 hm5C_associated_SNPs_65106 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr2:113317040-113317060
64251 chr8 48883249 48883249 1 + C T SKCM 48883247 + 48883227 48883267 41 CAGTACACGTCTGGGAAGGGCTCCAGTGCAGTTGGCCTCAC CAGTACACGTCTGGGAAGGGCTTCAGTGCAGTTGGCCTCAC < 41bp 0.852207048364133 0.601765858943127 0.9002169 0.41497338 prediction 0.500882378842011 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883247 chr8:48883249 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65109 0 0 17 FMR1 POSTAR2 GSE39682,GSM977616 chr8:48883184-48883255
64251 chr19 9267985 9267985 1 + G T COAD 9267982 + 9267962 9268002 41 GATGTCGCTGTGGACTTTACCGAGAAGGAGTGGCCCTTGCT GATGTCGCTGTGGACTTTACCGATAAGGAGTGGCCCTTGCT < 41bp 0.80725829678728 0.556834772889139 0.8982988 0.15729696 prediction 0.500847047796283 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9267982 chr19:9267985 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_65113 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:9267959-9267997
64251 chr11 47297655 47297655 1 + C T COAD 47297653 + 47297633 47297673 41 CTTTGCTCTTCCAGACCCATCTCGATTCACCCTAGTGGATT CTTTGCTCTTCCAGACCCATCTTGATTCACCCTAGTGGATT < 41bp 0.811326397530487 0.560907702901869 0.6687262 0.0685631 prediction 0.500837389257236 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47297653 chr11:47297655 stopgain 0.998 1 23 hm5C_associated_SNPs_65115 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:47297635-47297673
64251 chr7 92938234 92938234 1 + A C rs141252888 92938233 + 92938213 92938253 41 AGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAA AGACTATGTGGATGAGCAGACCGGAGATGGTCCTGTGAAAA < 41bp 0.750451224968094 0.500037395230068 0.8755804 0.69912666 prediction 0.500827659476053 Functional Loss - VPS50 ENSG00000004766 CDS Human protein_coding chr7:92938233 chr7:92938234 synonymous SNV . 0 22 hm5C_associated_SNPs_65117 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:92938214-92938241
64251 chr9 80921290 80921290 1 + C T GBM 80921288 + 80921268 80921308 41 GCCTCCTACGTGTATTATTGCGCAAATGAGACGGTGCATGG GCCTCCTACGTGTATTATTGCGTAAATGAGACGGTGCATGG < 41bp 0.826313273823645 0.575899663719299 0.54914576 0.39721048 prediction 0.500827220208692 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80921288 chr9:80921290 nonsynonymous SNV 0.937 1 23 hm5C_associated_SNPs_65118 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr9:80921238-80921356
64251 chr12 96350605 96350605 1 + C T GBM 96350603 + 96350583 96350623 41 TGCATGATGAGGGCTGGCACCACGCTGGTGGAGTGCAAGAG TGCATGATGAGGGCTGGCACCATGCTGGTGGAGTGCAAGAG < 41bp 0.807394482483674 0.556992099881164 0.15047157 0.16662192 prediction 0.500804765205019 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350603 chr12:96350605 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_65120 0 0 1 SRSF7 POSTAR2 ENCODE chr12:96350598-96350710
64251 chr20 62664245 62664245 1 + G T BLCA 62664242 + 62664222 62664262 41 GTGAGAGTGCAGAGCCTCGGCATGGGGAGCTGTGGTGCGCC GTGAGAGTGCAGAGCCTCGGCATTGGGAGCTGTGGTGCGCC < 41bp 0.750395390325934 0.352981185218012 0.78824997 0.25162202 prediction 0.500790780651868 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62664242 chr20:62664245 nonsynonymous SNV 0.248 4 24 hm5C_associated_SNPs_65123 0 0 7 DDX55 POSTAR2 ENCODE chr20:62664200-62664287
64251 chr6 88046820 88046820 1 + G T STAD 88046817 + 88046797 88046837 41 AGAGAAAGAGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCA AGAGAAAGAGTTTCAAAGCCCAGTGCTCAGAGGGGTGCGCA < 41bp 0.913393697411678 0.663005981466101 0.3752511 0.325575 prediction 0.500775431891155 Functional Loss - SMIM8 ENSG00000111850;ENSG00000226524 CDS Human other chr6:88046817 chr6:88046820 nonsynonymous SNV 0.941 4 24 hm5C_associated_SNPs_65125 0 0 1 GRWD1 POSTAR2 ENCODE chr6:88046743-88046880
64251 chr19 10220645 10220645 1 + A T LUAD 10220641 + 10220621 10220661 41 GCGGGATGAAGAAGCTGCTCCAGGAGAAGTTCCCCAACATG GCGGGATGAAGAAGCTGCTCCAGGTGAAGTTCCCCAACATG < 41bp 0.863159787733111 0.612775389608675 0.8699597 0.8861508 prediction 0.500768796248871 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10220641 chr19:10220645 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_65127 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10220640-10220660
64251 chr15 44053654 44053654 1 + G T LUAD 44053652 + 44053632 44053672 41 CAGCCACTTGAAGAAGCAGGCAGGACCAGCTTCAGTGCCTC CAGCCACTTGAAGAAGCAGGCATGACCAGCTTCAGTGCCTC < 41bp 0.750381520726785 0.399679800779542 0.78472877 0.18379891 prediction 0.50076304145357 Functional Loss - PDIA3 ENSG00000167004 CDS Human protein_coding chr15:44053652 chr15:44053654 stopgain 0.999 1 23 hm5C_associated_SNPs_65129 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr15:44053626-44053688
64251 chr1 228346341 228346341 1 + G C HNSC 228346340 + 228346320 228346360 41 CCACCTGGGCTTGGGCAGCGCGCAGGACGCGGTGCGCGGCC CCACCTGGGCTTGGGCAGCGCCCAGGACGCGGTGCGCGGCC < 41bp 0.848134842967949 0.597760314333003 0.583136 0.2788057 prediction 0.500749057269891 Functional Loss - GJC2 ENSG00000198835 CDS Human protein_coding chr1:228346340 chr1:228346341 synonymous SNV . 0 22 hm5C_associated_SNPs_65132 0 0 1 SND1 POSTAR2 ENCODE chr1:228346295-228346360
64251 chr3 122808133 122808133 1 + C T SKCM 122808131 + 122808111 122808151 41 AATAATGTACTGGTGCTTTACTCCAAATCTGGTGAGTGTCC AATAATGTACTGGTGCTTTACTTCAAATCTGGTGAGTGTCC < 41bp 0.750341528775771 0.449140090313986 0.95990026 0.15305835 prediction 0.500683057551543 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122808131 chr3:122808133 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_65143 0 0 2 DDX3X POSTAR2 ENCODE chr3:122808012-122808137
64251 chr1 100752704 100752704 1 + G T LUAD 100752701 + 100752681 100752721 41 TGGAGTTTCCAGAATAAAAACAGGACCAGTTACACTCCATA TGGAGTTTCCAGAATAAAAACAGTACCAGTTACACTCCATA < 41bp 0.750330713794235 0.397031475939408 0.24100193 0.13324755 prediction 0.50066142758847 Functional Loss - RTCA ENSG00000137996 CDS Human protein_coding chr1:100752701 chr1:100752704 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65146 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:100752691-100752744
64251 chr16 77228997 77228997 1 + T C COAD 77228996 + 77228976 77229016 41 CGCCGGGCCTCCGGCACTTCCTGTATAAGCCGCTGGACATC CGCCGGGCCTCCGGCACTTCCCGTATAAGCCGCTGGACATC < 41bp 0.766307902959858 0.515982079500794 0.50446534 0.30404347 prediction 0.500651646918128 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228996 chr16:77228997 nonsynonymous SNV 0.970 4 22 hm5C_associated_SNPs_65149 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:77228969-77228998
64251 chr13 108881771 108881771 1 + G T UCEC 108881769 + 108881749 108881789 41 GGATGTATTGCTTTATTTTCCAGAACAGCCATCCTCTTCAC GGATGTATTGCTTTATTTTCCATAACAGCCATCCTCTTCAC < 41bp 0.854206996329677 0.603898460117287 0.16674876 0.06639454 prediction 0.500617072424782 Functional Loss - ABHD13 ENSG00000139826 CDS Human protein_coding chr13:108881769 chr13:108881771 stopgain 0.999 1 23 hm5C_associated_SNPs_65155 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:108881739-108881777
64251 chr4 151505096 151505096 1 + G T SKCM 151505094 + 151505074 151505114 41 ACCGGCTCAACGGCATCCTGCTGCAGCTCATCTCCTGCCTG ACCGGCTCAACGGCATCCTGCTTCAGCTCATCTCCTGCCTG < 41bp 0.879021509269092 0.628720199319113 0.2351631 0.12345162 prediction 0.500602619899957 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151505094 chr4:151505096 synonymous SNV . 0 23 hm5C_associated_SNPs_65158 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585664 chr4:151505080-151505180
64251 chr15 90771850 90771850 1 + C T READ 90771848 + 90771828 90771868 41 CGGCCCCGGGTCCGCCTTGGCTCGGAGATCCGTGACTCTGT CGGCCCCGGGTCCGCCTTGGCTTGGAGATCCGTGACTCTGT < 41bp 0.750300246532211 0.487487697730064 0.23097831 0.18067747 prediction 0.500600493064421 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771848 chr15:90771850 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_65159 0 0 1 RPS3 POSTAR2 ENCODE chr15:90771812-90771888
64251 chr14 24845700 24845700 1 + G T OV 24845698 + 24845678 24845718 41 GCCCCCTCTGTACCCCCAGACGGGGCCCCCACCATCCTACA GCCCCCTCTGTACCCCCAGACGTGGCCCCCACCATCCTACA < 41bp 0.844283523150413 0.59398617085233 0.91745 0.09773597 prediction 0.500594704596165 Functional Loss - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24845698 chr14:24845700 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65160 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:24845693-24845712
64251 chr22 21272283 21272283 1 + C T BLCA 21272281 + 21272261 21272301 41 CTGGTATATGGGGCCGGTGTCTCGCCAGGAGGCGCAGACCC CTGGTATATGGGGCCGGTGTCTTGCCAGGAGGCGCAGACCC < 41bp 0.759488859824905 0.509202494938969 0.22704446 0.09039527 prediction 0.500572729771872 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21272281 chr22:21272283 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_65162 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:21272264-21272284
64251 chr19 58117676 58117676 1 + C T PAAD 58117674 + 58117654 58117694 41 TTCTTCGACACAGGAAAGCACACGGTAGAACAAGGACTCAT TTCTTCGACACAGGAAAGCACATGGTAGAACAAGGACTCAT < 41bp 0.751250712224355 0.500986748095565 0.35030234 0.6234519 prediction 0.500527928257582 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117674 chr19:58117676 synonymous SNV . 0 23 hm5C_associated_SNPs_65165 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:58117663-58117700
64251 chr8 104342230 104342230 1 + G T STAD 104342227 + 104342207 104342247 41 AGCATCCATCTCCAGACTCTCTGGGGAACAGGTCGACGGGA AGCATCCATCTCCAGACTCTCTGTGGAACAGGTCGACGGGA < 41bp 0.911661716528121 0.661404305839631 0.91186094 0.10249463 prediction 0.500514821376981 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342227 chr8:104342230 nonsynonymous SNV 0.503 0 24 hm5C_associated_SNPs_65168 0 0 1 GRWD1 POSTAR2 ENCODE chr8:104342102-104342250
64251 chr4 190862186 190862186 1 + A T PRAD 190862182 + 190862162 190862202 41 GCCATGGCCGAGTACTCCTACGTGAAGTCTACCAAGCTCGT GCCATGGCCGAGTACTCCTACGTGTAGTCTACCAAGCTCGT < 41bp 0.750245494323517 0.440049555349121 0.83718956 0.7523205 prediction 0.500490988647033 Functional Loss - FRG1 ENSG00000109536 CDS Human protein_coding chr4:190862182 chr4:190862186 stopgain 0.625 1 25 hm5C_associated_SNPs_65173 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:190862180-190862200
64251 chr12 52388891 52388891 1 + A C rs2854464 52388890 + 52388870 52388910 41 TCTTGGGTGTTAGTGTCAGCCATGGGAAATGAGCCAGCCCA TCTTGGGTGTTAGTGTCAGCCCTGGGAAATGAGCCAGCCCA < 41bp 0.750236666368532 0.489791841936779 0.49929065 0.18047798 prediction 0.500473332737064 Functional Loss - ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52388890 chr12:52388891 . . 0 22 hm5C_associated_SNPs_65177 0 0 14 EIF3G POSTAR2 GSE65004,GSM1585675 chr12:52388863-52388900
64251 chr17 38296815 38296815 1 + G C SKCM 38296814 + 38296794 38296834 41 TCCGTAAGATGGCGGACCGGCGGCGGCAGCGCGCTTCGCAA TCCGTAAGATGGCGGACCGGCCGCGGCAGCGCGCTTCGCAA < 41bp 0.848538154591421 0.598303135496103 0.87620527 0.4519295 prediction 0.500470038190635 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38296814 chr17:38296815 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_65179 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:38296802-38296827
64251 chr19 2477183 2477183 1 + C T SKCM 2477181 + 2477161 2477201 41 GCATGCAGCGCCTGGCGCAGCTCCTGGGAGAGCCGGCCGAG GCATGCAGCGCCTGGCGCAGCTTCTGGGAGAGCCGGCCGAG < 41bp 0.750225982747661 0.478173620825869 0.34936786 0.27756357 prediction 0.500451965495323 Functional Loss - GADD45B ENSG00000099860 CDS Human protein_coding chr19:2477181 chr19:2477183 synonymous SNV . 0 23 hm5C_associated_SNPs_65182 0 0 2 GRWD1 POSTAR2 ENCODE chr19:2477103-2477185
64251 chr3 106959893 106959893 1 + G C rs139177006 106959889 + 106959869 106959909 41 GGTACCAGTGCCGCTGGGCACACTGGCTTCACGCCGGCTCC GGTACCAGTGCCGCTGGGCACACTCGCTTCACGCCGGCTCC < 41bp 0.750224404689817 0.467806979233918 0.13512483 0.061774492 prediction 0.500448809379634 Functional Loss - DUBR ENSG00000243701 ncRNA_exonic Human lincRNA chr3:106959889 chr3:106959893 . . 0 25 hm5C_associated_SNPs_65183 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:106959860-106959918
64251 chr11 65043426 65043426 1 + C T UCEC 65043424 + 65043404 65043444 41 AACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATCAGCTAC AACAAAAAGGAGTGTGTCAACTTGTAGCCCCCATCAGCTAC < 41bp 0.813623457940331 0.563399260419655 0.20460281 0.123478085 prediction 0.500448395041352 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65043424 chr11:65043426 nonsynonymous SNV 0.288 2 23 hm5C_associated_SNPs_65184 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65043406-65043438
64251 chr19 54377349 54377349 1 + C T STAD 54377347 + 54377327 54377367 41 TTCGTTGCCTGCATCATCTTCGCGTTCATCAGCGACCCCAA TTCGTTGCCTGCATCATCTTCGTGTTCATCAGCGACCCCAA < 41bp 0.753287799923052 0.503066804404429 0.17711055 0.10527563 prediction 0.500441991037245 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377347 chr19:54377349 nonsynonymous SNV 0.088 0 23 hm5C_associated_SNPs_65187 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:54377297-54377349
64251 chr9 34249862 34249862 1 + C T HNSC 34249860 + 34249840 34249880 41 TCTGAACTGCAGATGCTGTCCCCCAGCGAGCGGCAGTGTGT TCTGAACTGCAGATGCTGTCCCTCAGCGAGCGGCAGTGTGT < 41bp 0.750214485691547 0.47218997047775 0.12921986 0.08704665 prediction 0.500428971383093 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34249860 chr9:34249862 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_65191 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:34249834-34249865
64251 chr1 45243396 45243396 1 + C T COAD 45243394 + 45243374 45243414 41 CATCGTGCTCATCGACAGCACACCGTACCGACAGTGGTACG CATCGTGCTCATCGACAGCACATCGTACCGACAGTGGTACG < 41bp 0.750210750448022 0.488987341986369 0.012247145 0.03087923 prediction 0.500421500896043 Functional Loss - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243394 chr1:45243396 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_65193 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243283-45243456
64251 chr20 33026406 33026406 1 + C T STAD 33026404 + 33026384 33026424 41 TTCTAGACCTCCAAGACCTTCACGACCACCACCACCCACCC TTCTAGACCTCCAAGACCTTCATGACCACCACCACCCACCC < 41bp 0.825867513786341 0.575663874394915 0.11393955 0.053457648 prediction 0.500407278782853 Functional Loss - ITCH ENSG00000078747 CDS Human protein_coding chr20:33026404 chr20:33026406 stopgain 0.996 0 23 hm5C_associated_SNPs_65194 0 0 2 ZNF622 POSTAR2 ENCODE chr20:33026381-33026421
64251 chr19 19166153 19166153 1 + G T HNSC 19166150 + 19166130 19166170 41 GAAAGATGCTATTGTCCGTGCTGGTGGGACGGAGTCCATCG GAAAGATGCTATTGTCCGTGCTGTTGGGACGGAGTCCATCG < 41bp 0.750199864205277 0.350387210455766 0.26875824 0.15924686 prediction 0.500399728410554 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166150 chr19:19166153 nonsynonymous SNV 0.016 4 24 hm5C_associated_SNPs_65195 0 0 3 FXR2 POSTAR2 ENCODE chr19:19166120-19166193
64251 chr2 61009110 61009110 1 + C T COAD 61009108 + 61009088 61009128 41 GTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAG GTATAATGTGTCCACATCAACTTGAACAGTAATGGTAGAAG < 41bp 0.750196172174411 0.455077414898241 0.41976476 0.201861 prediction 0.500392344348822 Functional Loss - PAPOLG ENSG00000115421 CDS Human protein_coding chr2:61009108 chr2:61009110 stopgain 1.000 1 23 hm5C_associated_SNPs_65197 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:61009093-61009131
64251 chr1 156084823 156084823 1 + C T BLCA 156084821 + 156084801 156084841 41 AGAAGGAGGACCTGCAGGAGCTCAATGATCGCTTGGCGGTC AGAAGGAGGACCTGCAGGAGCTTAATGATCGCTTGGCGGTC < 41bp 0.782674313305747 0.532480506241245 0.18055803 0.18715286 prediction 0.500387614129004 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156084821 chr1:156084823 synonymous SNV . 0 23 hm5C_associated_SNPs_65200 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:156084769-156084835
64251 chr14 68029195 68029195 1 + G C HNSC 68029191 + 68029171 68029211 41 TTCAGATGTAGTTCAGCTTCCTGGGGTGAGGGTCTGGTTAC TTCAGATGTAGTTCAGCTTCCTGGCGTGAGGGTCTGGTTAC < 41bp 0.828659270485078 0.578472403092903 0.6945837 0.19315997 prediction 0.500373734784351 Functional Loss - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68029191 chr14:68029195 nonsynonymous SNV 0.012 0 25 hm5C_associated_SNPs_65205 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:68029184-68029208
64251 chr7 7636041 7636041 1 + C T UCEC 7636039 + 7636019 7636059 41 TGGCTGTCGAAAACCACTTCCTCGATGTGCGCTTTGTCTCA TGGCTGTCGAAAACCACTTCCTTGATGTGCGCTTTGTCTCA < 41bp 0.845197001913264 0.595012367539686 0.92062706 0.1340195 prediction 0.500369268747157 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7636039 chr7:7636041 stopgain 1.000 1 23 hm5C_associated_SNPs_65207 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:7636015-7636058
64251 chr8 42173783 42173783 1 + C T UCEC 42173781 + 42173761 42173801 41 ACTGATGCTGATGTGGCACCCCCGACAGAGGGGCACGGATC ACTGATGCTGATGTGGCACCCCTGACAGAGGGGCACGGATC < 41bp 0.78295164922392 0.53276792820046 0.06393832 0.058362782 prediction 0.500367442046919 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42173781 chr8:42173783 stopgain 0.808 1 23 hm5C_associated_SNPs_65208 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr8:42173750-42173783
64251 chr6 116559441 116559441 1 + G T LUAD 116559439 + 116559419 116559459 41 GTCCTCATCCTGGAAGAACTCAGAGGGGATGAAGGCACGAG GTCCTCATCCTGGAAGAACTCATAGGGGATGAAGGCACGAG < 41bp 0.886574346573921 0.636394661259099 0.900266 0.41021624 prediction 0.500359370629643 Functional Loss - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116559439 chr6:116559441 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_65209 0 0 3 DDX6 POSTAR2 ENCODE chr6:116559408-116559468
64251 chr7 108213735 108213735 1 + A T LUAD 108213731 + 108213711 108213751 41 TTTCATGGATCTAGCAAGCACTGCAGGACTGTCACTCAACG TTTCATGGATCTAGCAAGCACTGCTGGACTGTCACTCAACG < 41bp 0.750177405341599 0.432303995746339 0.17513973 0.22623786 prediction 0.500354810683197 Functional Loss - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108213731 chr7:108213735 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_65212 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:108213714-108213750
64251 chr22 50957142 50957142 1 + C T UCEC 50957140 + 50957120 50957160 41 GCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAGGAGCCA GCAGGAGCCCTGTCCCAGCACTTGGCTTCTCCCAGGAGCCA < 41bp 0.771118115605225 0.520946358121327 0.08429867 0.0680193 prediction 0.500343514967795 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957140 chr22:50957142 synonymous SNV . 0 23 hm5C_associated_SNPs_65215 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:50957110-50957144
64251 chr14 55241746 55241746 1 + C T UCEC 55241744 + 55241724 55241764 41 GCGCCAGTACCAGATCCCCTCTCGGAACGTCCCTTCCGCCC GCGCCAGTACCAGATCCCCTCTTGGAACGTCCCTTCCGCCC < 41bp 0.799409975965516 0.549240872889916 0.9000155 0.43219355 prediction 0.500338206151199 Functional Loss - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55241744 chr14:55241746 nonsynonymous SNV 0.540 4 23 hm5C_associated_SNPs_65216 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:55241737-55241794
64251 chr10 51769716 51769716 1 + T C rs182767162 51769715 + 51769695 51769735 41 ATCCTGCTGCTGGCACATGGCTCCTGTGAGGAGGTGAACGA ATCCTGCTGCTGGCACATGGCCCCTGTGAGGAGGTGAACGA < 41bp 0.750167272803053 0.499956532982598 0.13140053 0.02915737 prediction 0.500334545606107 Functional Loss - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51769715 chr10:51769716 nonsynonymous SNV 0.035 2 22 hm5C_associated_SNPs_65217 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:51769694-51769730
64251 chr6 117043379 117043379 1 + T C UCEC 117043378 + 117043358 117043398 41 TGTTGGGCCCTTTCTTATCTCTCCGATGGACCCAATGATAA TGTTGGGCCCTTTCTTATCTCCCCGATGGACCCAATGATAA < 41bp 0.791274573690661 0.541112572705083 0.2961629 0.048200488 prediction 0.500324001971155 Functional Loss - KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117043378 chr6:117043379 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_65220 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:117043359-117043382
64251 chr20 2842729 2842729 1 + T C COAD 2842728 + 2842708 2842748 41 GAGGAAATCTTCAAAATTGCCTCAATGGCCCCCGGGGCGCT GAGGAAATCTTCAAAATTGCCCCAATGGCCCCCGGGGCGCT < 41bp 0.750150393024934 0.49095625021678 0.72066784 0.22137621 prediction 0.500300786049869 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2842728 chr20:2842729 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_65222 0 0 3 EFTUD2 POSTAR2 ENCODE chr20:2842667-2842739
64251 chr1 9780197 9780197 1 + C T STAD 9780195 + 9780175 9780215 41 AAGGGCGAGCTGCTGAACCCCACGGGCACTGTGCGCAGTAA AAGGGCGAGCTGCTGAACCCCATGGGCACTGTGCGCAGTAA < 41bp 0.782317859013981 0.532170602124376 0.27753562 0.33572793 prediction 0.500294513779209 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9780195 chr1:9780197 nonsynonymous SNV 0.067 0 23 hm5C_associated_SNPs_65223 0 0 8 BUD13 POSTAR2 ENCODE chr1:9780158-9780211
64251 chr17 29196272 29196272 1 + C T BLCA 29196270 + 29196250 29196290 41 TTGAATAATTTTTCAGATTTCTCGGGTGGCATAGACTTTAA TTGAATAATTTTTCAGATTTCTTGGGTGGCATAGACTTTAA < 41bp 0.750145117149706 0.476916548092912 0.27323484 0.23723611 prediction 0.500290234299413 Functional Loss - ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29196270 chr17:29196272 nonsynonymous SNV 0.028 0 23 hm5C_associated_SNPs_65224 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:29196260-29196280
64251 chr6 43147484 43147484 1 + A C rs529025033 43147483 + 43147463 43147503 41 CCTGAGTAGCTGGGCCTGTGCACTGGGCAGGTTCCTGGGGC CCTGAGTAGCTGGGCCTGTGCCCTGGGCAGGTTCCTGGGGC < 41bp 0.750142089514722 0.493650493602625 0.5137028 0.53269655 prediction 0.500284179029445 Functional Loss - SRF ENSG00000112658 UTR3 Human protein_coding chr6:43147483 chr6:43147484 . . 0 22 hm5C_associated_SNPs_65226 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:43147483-43147484
64251 chr4 1807536 1807536 1 + G A UCEC 1807533 + 1807513 1807553 41 GTAACCTGCGGGAGTTTCTGCGGGCGCGGCGGCCCCCGGGC GTAACCTGCGGGAGTTTCTGCGGACGCGGCGGCCCCCGGGC < 41bp 0.75014126622024 0.498697034226022 0.9261729 0.90288395 prediction 0.500282532440481 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807533 chr4:1807536 nonsynonymous SNV 0.837 5 24 hm5C_associated_SNPs_65227 0 0 4 DDX24 POSTAR2 ENCODE chr4:1807526-1807558
64251 chr11 709426 709426 1 + G C CESC 709425 + 709405 709445 41 ACCATGAGCCAGTCCGGGGCCGTGAGCTGCTGCCCGGGTGC ACCATGAGCCAGTCCGGGGCCCTGAGCTGCTGCCCGGGTGC < 41bp 0.750138993713842 0.443514078812184 0.2682475 0.22207853 prediction 0.500277987427684 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:709425 chr11:709426 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_65228 0 0 3 BUD13 POSTAR2 ENCODE chr11:709395-709433
64251 chr20 62614419 62614419 1 + C T COAD 62614417 + 62614397 62614437 41 CAGCGCCACTGGCTTCACCACGCGGTCAGACATTGGGCCCG CAGCGCCACTGGCTTCACCACGTGGTCAGACATTGGGCCCG < 41bp 0.792287364511833 0.542160026984696 0.8951228 0.90549326 prediction 0.500254675054274 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62614417 chr20:62614419 nonsynonymous SNV 0.927 4 23 hm5C_associated_SNPs_65230 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:62614400-62614420
64251 chrX 47518318 47518318 1 - C G LUSC 47518322 - 47518302 47518342 41 TCCCCAGGAGCCCATCATGGCGACGCCCCCTAAGCGGCGGG TCCCCAGGAGCCCATCATGGCGACCCCCCCTAAGCGGCGGG < 41bp 0.750127052956566 0.470225996644616 0.012688249 0.008729368 prediction 0.500254105913133 Functional Loss - UXT ENSG00000126756 CDS Human protein_coding chrX:47518322 chrX:47518318 synonymous SNV . 0 25 hm5C_associated_SNPs_65231 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:47518309-47518337
64251 chr2 74757877 74757877 1 + G C BLCA 74757873 + 74757853 74757893 41 GTCCGTGTGAGACTGCTAAGCGGCGACACGTATGAGGCCGT GTCCGTGTGAGACTGCTAAGCGGCCACACGTATGAGGCCGT < 41bp 0.825407260848533 0.575296742253624 0.6806681 0.26493222 prediction 0.500221037189817 Functional Loss - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757873 chr2:74757877 nonsynonymous SNV 0.939 4 25 hm5C_associated_SNPs_65234 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr2:74757852-74757883
64251 chr18 32825387 32825387 1 + G T COAD 32825384 + 32825364 32825404 41 AGAAACTAAGATCTCCTTCCCAAGGGGGCAGTTTTAGTCAA AGAAACTAAGATCTCCTTCCCAATGGGGCAGTTTTAGTCAA < 41bp 0.750092305878282 0.361818147317775 0.8946962 0.1560382 prediction 0.500184611756564 Functional Loss - ZNF397 ENSG00000186812 CDS Human protein_coding chr18:32825384 chr18:32825387 nonsynonymous SNV 0.508 2 24 hm5C_associated_SNPs_65235 0 0 1 AARS POSTAR2 ENCODE chr18:32825336-32825389
64251 chr15 22945048 22945048 1 + G T ESCA 22945045 + 22945025 22945065 41 GCCCGCCTTGTGCAGGTGGTCACGGGCTCGGGCCGCCAGGA GCCCGCCTTGTGCAGGTGGTCACTGGCTCGGGCCGCCAGGA < 41bp 0.915083517522 0.664994231726288 0.95902586 0.928216 prediction 0.500178571591424 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22945045 chr15:22945048 synonymous SNV . 0 24 hm5C_associated_SNPs_65237 0 0 5 BUD13 POSTAR2 ENCODE chr15:22944994-22945076
64251 chr20 44576334 44576334 1 + G C rs568412072 44576330 + 44576310 44576350 41 TTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACT TTCTTCCTCATCGTCCTCCTCGGACGCCAAGGACCGGGACT < 41bp 0.807431978465536 0.557348537425621 0.95008266 0.9326247 prediction 0.500166882079831 Functional Loss - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44576330 chr20:44576334 nonsynonymous SNV 0.056 0 25 hm5C_associated_SNPs_65239 0 0 1 DDX6 POSTAR2 ENCODE chr20:44576312-44576406
64251 chr19 52090816 52090816 1 + A C READ 52090812 + 52090792 52090832 41 ACTCAACCCTCATTATACATCAGAAAATTCATACTGGTGAG ACTCAACCCTCATTATACATCAGACAATTCATACTGGTGAG < 41bp 0.75007995194136 0.350835379387401 0.091261774 0.07945374 prediction 0.500159903882719 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090812 chr19:52090816 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_65240 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:52090774-52090827
64251 chr7 150746350 150746350 1 + G T LUSC 150746348 + 150746328 150746368 41 CCGCAGAGCACGCCGCCTTCCTGCGCGCCCTGGGCCGGCCC CCGCAGAGCACGCCGCCTTCCTTCGCGCCCTGGGCCGGCCC < 41bp 0.891206289729996 0.641128569157119 0.05895382 0.021522224 prediction 0.500155441145754 Functional Loss - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746348 chr7:150746350 synonymous SNV . 0 23 hm5C_associated_SNPs_65241 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:150746344-150746372
64251 chr11 372901 372901 1 + C T SKCM 372899 + 372879 372919 41 TTTGAGGACTGGTGTGGGGGCGCCGTGGGCCACCTGAGGAG TTTGAGGACTGGTGTGGGGGCGTCGTGGGCCACCTGAGGAG < 41bp 0.750076271587268 0.491657733136376 0.73418194 0.8002971 prediction 0.500152543174536 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:372899 chr11:372901 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_65243 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:372875-372914
64251 chr19 4359198 4359198 1 + C T HNSC 4359196 + 4359176 4359216 41 TCTACAAGGGTTCCCCTGACCTCGTGAGGCTCCAGGAACCC TCTACAAGGGTTCCCCTGACCTTGTGAGGCTCCAGGAACCC < 41bp 0.781427251776325 0.531355721315484 0.17250803 0.10387701 prediction 0.500143060921681 Functional Loss - MPND ENSG00000008382 CDS Human protein_coding chr19:4359196 chr19:4359198 synonymous SNV . 0 23 hm5C_associated_SNPs_65247 0 0 1 PPIG POSTAR2 ENCODE chr19:4359196-4359229
64251 chr15 39884924 39884924 1 + C T UCEC 39884922 + 39884902 39884942 41 GCAAGGGAGATGCCTGTGACCACGATGATGACAACGATGGC GCAAGGGAGATGCCTGTGACCATGATGATGACAACGATGGC < 41bp 0.793776046079184 0.543710357260028 0.10567433 0.106396526 prediction 0.500131377638311 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39884922 chr15:39884924 synonymous SNV . 0 23 hm5C_associated_SNPs_65250 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr15:39884920-39884940
64251 chr15 59911471 59911471 1 + C T LUSC 59911469 + 59911449 59911489 41 CGTGCACGGTGGATGCCTGGCTCTGTTCCCAACCACCCCAA CGTGCACGGTGGATGCCTGGCTTTGTTCCCAACCACCCCAA < 41bp 0.750058616631152 0.48347972709268 0.115620226 0.08892113 prediction 0.500117233262305 Functional Loss - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911469 chr15:59911471 nonsynonymous SNV 0.170 0 23 hm5C_associated_SNPs_65252 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr15:59911460-59911487
64251 chr11 66372815 66372815 1 + C T STAD 66372813 + 66372793 66372833 41 ACTGGATCTCATTCCAGCACCGCGGAGACCTGGGCAATGTC ACTGGATCTCATTCCAGCACCGTGGAGACCTGGGCAATGTC < 41bp 0.762659578607448 0.512602868587277 0.3575515 0.16262904 prediction 0.500113420040343 Functional Loss - CCS ENSG00000173992 CDS Human protein_coding chr11:66372813 chr11:66372815 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_65253 0 0 2 METTL3 POSTAR2 GSE46705,GSM1135006 chr11:66372800-66372820
64251 chr7 90042120 90042120 1 + A T UCEC 90042116 + 90042096 90042136 41 TTACGATTGATCACATTCAACAGAAACGAGAAGAACCTGAC TTACGATTGATCACATTCAACAGATACGAGAAGAACCTGAC < 41bp 0.750051531096846 0.441485672704228 0.26040968 0.5451911 prediction 0.500103062193692 Functional Loss - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042116 chr7:90042120 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_65257 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:90042080-90042120
64251 chrX 100088288 100088288 1 + C T GBM 100088286 + 100088266 100088306 41 GGAGGCCCGTGCGATGGAAGCTCGTGCAATGGAGGCCCGAG GGAGGCCCGTGCGATGGAAGCTTGTGCAATGGAGGCCCGAG < 41bp 0.787775701207683 0.53772965178357 0.34864056 0.16286778 prediction 0.500092098848227 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088286 chrX:100088288 nonsynonymous SNV 0.741 2 23 hm5C_associated_SNPs_65258 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:100088278-100088311
64251 chr21 18937762 18937762 1 + C T STAD 18937760 + 18937740 18937780 41 TTGCAGGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCA TTGCAGGGAAGATGTGCCACCTTCAAAGAGCCGTACGTCCA < 41bp 0.75003470498673 0.459115951147298 0.96823937 0.70851207 prediction 0.50006940997346 Functional Loss - CXADR ENSG00000154639 CDS Human protein_coding chr21:18937760 chr21:18937762 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_65265 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:18937741-18937773
64251 chr7 128455857 128455857 1 + G T BLCA 128455854 + 128455834 128455874 41 AAGCTAAATCCACAGAAGATCAGGAGGAAAATGAAGAGGAC AAGCTAAATCCACAGAAGATCAGTAGGAAAATGAAGAGGAC < 41bp 0.750031196516343 0.365347237958457 0.87711895 0.2558993 prediction 0.500062393032687 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128455854 chr7:128455857 stopgain 0.027 0 24 hm5C_associated_SNPs_65268 0 0 7 AGGF1 POSTAR2 ENCODE chr7:128455793-128455862
64251 chr4 158283987 158283987 1 + G T LUAD 158283985 + 158283965 158284005 41 CCTCAGTCTGAGCAACGTTGCTGGAGTATTCTACATCCTTG CCTCAGTCTGAGCAACGTTGCTTGAGTATTCTACATCCTTG < 41bp 0.865375381710024 0.615359032221988 0.59056973 0.11016995 prediction 0.500032698976073 Functional Loss - GRIA2 ENSG00000120251 CDS Human protein_coding chr4:158283985 chr4:158283987 stopgain 0.999 1 23 hm5C_associated_SNPs_65270 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:158283980-158284000
64251 chr4 38690565 38690565 1 + G T LUAD 38690563 + 38690543 38690583 41 CGCGGCATGGAATACGGAGCCCGGGGATCCTGCCCGTCATC CGCGGCATGGAATACGGAGCCCTGGGATCCTGCCCGTCATC < 41bp 0.891289914156117 0.641274563177432 0.8986659 0.56584597 prediction 0.500030701957371 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690563 chr4:38690565 synonymous SNV . 0 23 hm5C_associated_SNPs_65271 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr4:38690553-38690593
64251 chr12 9845688 9845688 1 + C T HNSC 9845686 + 9845666 9845706 41 TGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG TGCAAAGGTTTCACAAGTTCCTTGAATGAATCCAAGACCTG < 41bp 0.781258577335593 0.531258268770625 0.43747032 0.050589234 prediction 0.500000617129936 Functional Loss - CLEC2D ENSG00000069493 CDS Human protein_coding chr12:9845686 chr12:9845688 stopgain 0.001 0 23 hm5C_associated_SNPs_65275 0 0 2 PRPF8 POSTAR2 ENCODE chr12:9845686-9845750
64251 chrX 13727053 13727053 1 + C T UCEC 13727051 + 13727031 13727071 41 GTTACCATGCAGATTTGGGACACGGCAGGTCAGGAGCGATT GTTACCATGCAGATTTGGGACATGGCAGGTCAGGAGCGATT < 41bp 0.785084317538954 0.535084273204919 0.14886114 0.17641905 prediction 0.500000088668069 Functional Loss - RAB9A ENSG00000123595 CDS Human protein_coding chrX:13727051 chrX:13727053 nonsynonymous SNV 0.968 5 23 hm5C_associated_SNPs_65276 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:13727000-13727060
64251 chr15 40494809 40494809 1 + C T HNSC 40494807 + 40494787 40494827 41 CAGTCCTCCTGCAGATCCCCCACGAGTTTTAGCTCAACGAA CAGTCCTCCTGCAGATCCCCCATGAGTTTTAGCTCAACGAA < 41bp 0.749999037613224 0.47003490643946 0.089173555 0.050231695 prediction 0.499998075226449 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40494807 chr15:40494809 stopgain 0.166 0 23 hm5C_associated_SNPs_65277 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr15:40494807-40494828
64251 chr1 109756738 109756738 1 + G C BLCA 109756734 + 109756714 109756754 41 GACCAGCTGGTGAAGGCAGACAGCGAGTGGCGACGATGTAA GACCAGCTGGTGAAGGCAGACAGCCAGTGGCGACGATGTAA < 41bp 0.801460917625554 0.551462728395539 0.40240625 0.32969618 prediction 0.499996378460031 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109756734 chr1:109756738 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_65278 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:109756648-109756745
64251 chr5 14664879 14664879 1 + G T rs117369308 14664877 + 14664857 14664897 41 GCCACTGCCTGGCACCCCGACGGGAGGGGCTCCGGATCGTT GCCACTGCCTGGCACCCCGACGTGAGGGGCTCCGGATCGTT < 41bp 0.829975668472851 0.579997032814758 0.8767478 0.80211675 prediction 0.499957271316186 Functional Loss - OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664877 chr5:14664879 . . 0 23 hm5C_associated_SNPs_65285 0 0 5 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr11 60470914 60470914 1 + G C rs35956659 60470913 + 60470893 60470933 41 TCCATCATGGCGACGGTTCTCGTAGGGGAATACCTGTCTAT TCCATCATGGCGACGGTTCTCCTAGGGGAATACCTGTCTAT < 41bp 0.749970149701729 0.430525029119576 0.8872558 0.058439344 prediction 0.499940299403457 Functional Loss - MS4A8 ENSG00000166959 CDS Human protein_coding chr11:60470913 chr11:60470914 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_65286 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr11:60470905-60470923
64251 chr1 114512727 114512727 1 + G T LGG 114512725 + 114512705 114512745 41 TCCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATGGCAC TCCGTTTTGGAGGGGCCTGGCATAGTTGTGGCAGATGGCAC < 41bp 0.749952220256258 0.398662490030984 0.7990974 0.22292599 prediction 0.499904440512516 Functional Loss - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114512725 chr1:114512727 nonsynonymous SNV 0.937 3 23 hm5C_associated_SNPs_65289 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:114512665-114512734
64251 chr11 123448200 123448200 1 + C T STAD 123448198 + 123448178 123448218 41 GAGAAGGGCTCAGATCACTCCTCGGACAAGTCCCCGTCCAC GAGAAGGGCTCAGATCACTCCTTGGACAAGTCCCCGTCCAC < 41bp 0.812244152817913 0.562315542992073 0.37115583 0.2704683 prediction 0.49985721965168 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123448198 chr11:123448200 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_65297 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:123448180-123448200
64251 chr7 128852282 128852282 1 + C T HNSC 128852280 + 128852260 128852300 41 ACAGAACTCATGGATGCAGACTCGGACTTCTGAGCCTGCAG ACAGAACTCATGGATGCAGACTTGGACTTCTGAGCCTGCAG < 41bp 0.749921953016447 0.482475019279296 0.10561544 0.15213776 prediction 0.499843906032895 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128852280 chr7:128852282 nonsynonymous SNV 0.976 2 23 hm5C_associated_SNPs_65299 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:128852259-128852285
64251 chr19 15752396 15752396 1 + G T LUSC 15752394 + 15752374 15752414 41 GTTTCCCGCAACCCCCGAAACGGAATTGGTTCTTGGGTCAC GTTTCCCGCAACCCCCGAAACGTAATTGGTTCTTGGGTCAC < 41bp 0.881159177105025 0.631247271455796 0.867702 0.2264972 prediction 0.499823811298457 Functional Loss - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15752394 chr19:15752396 synonymous SNV . 0 23 hm5C_associated_SNPs_65302 0 0 3 GRWD1 POSTAR2 ENCODE chr19:15752328-15752397
64251 chr1 64102018 64102018 1 + C T rs79097301 64102016 + 64101996 64102036 41 ATTTCCAGCAGACTGGGGTCCGCGGCTTTGCACGGAGCATG ATTTCCAGCAGACTGGGGTCCGTGGCTTTGCACGGAGCATG < 41bp 0.803308094198181 0.553411799150623 0.41703397 0.2958671 prediction 0.499792590095116 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64102016 chr1:64102018 synonymous SNV . 0 23 hm5C_associated_SNPs_65304 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:64101996-64102022
64251 chr1 168148409 168148409 1 + G T LUAD 168148407 + 168148387 168148427 41 GACCCACATCATGAAGTCGGCGGATGTGGAGAAGTGAGGCT GACCCACATCATGAAGTCGGCGTATGTGGAGAAGTGAGGCT < 41bp 0.749880866513478 0.416829721964906 0.8690595 0.52015585 prediction 0.499761733026955 Functional Loss - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168148407 chr1:168148409 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_65309 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:168148394-168148412
64251 chr4 1332933 1332933 1 + A C COAD 1332929 + 1332909 1332949 41 CAAAGAAGTCTTCCACTTCTCACAAGCCGAGAAGGTGTACA CAAAGAAGTCTTCCACTTCTCACACGCCGAGAAGGTGTACA < 41bp 0.749877014178529 0.351888593936075 0.25333613 0.11826417 prediction 0.499754028357057 Functional Loss - MAEA ENSG00000090316 CDS Human protein_coding chr4:1332929 chr4:1332933 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_65310 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr4:1332920-1332940
64251 chr8 41355096 41355096 1 + C T rs17656952 41355094 + 41355074 41355114 41 TTTATGCAGAAGCAGAGAAGCTCGGCGGCCAGTCATATCTC TTTATGCAGAAGCAGAGAAGCTTGGCGGCCAGTCATATCTC < 41bp 0.821929847467817 0.572068226072539 0.18883282 0.13123798 prediction 0.499723242790555 Functional Loss - GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41355094 chr8:41355096 synonymous SNV . 0 23 hm5C_associated_SNPs_65314 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:41355065-41355101
64251 chr20 49575698 49575698 1 + G C COAD 49575694 + 49575674 49575714 41 CAGTACTTGGCAGCGGCCGGCGTGGGCCGCCTTGGCCTTGT CAGTACTTGGCAGCGGCCGGCGTGCGCCGCCTTGGCCTTGT < 41bp 0.749847172219862 0.477854392354209 0.8915188 0.41334128 prediction 0.499694344439724 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575694 chr20:49575698 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_65318 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49575697-49575722
64251 chrX 54836409 54836409 1 + G T UCEC 54836406 + 54836386 54836426 41 CAGGTTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGACAC CAGGTTCTGGCAGCTGAAAACAATAGTCTAGCAGCTGACAC < 41bp 0.914865429361003 0.665027784653674 0.41242266 0.17180917 prediction 0.499675289414657 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836406 chrX:54836409 nonsynonymous SNV 0.937 0 24 hm5C_associated_SNPs_65322 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54836367-54836422
64251 chr13 114290892 114290892 1 + G T CESC 114290889 + 114290869 114290909 41 TTGACAACACATTTGAAATCCACGATGACATAGAAGTGCTG TTGACAACACATTTGAAATCCACTATGACATAGAAGTGCTG < 41bp 0.74983269363073 0.370177131822942 0.028317839 0.03871301 prediction 0.499665387261459 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290889 chr13:114290892 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_65324 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:114290848-114290921
64251 chr4 88036320 88036320 1 + C T UCEC 88036318 + 88036298 88036338 41 GATCACCCTAGACCTGCTCTCTCGGATACCCCAGCCTCCCG GATCACCCTAGACCTGCTCTCTTGGATACCCCAGCCTCCCG < 41bp 0.749827759372897 0.484240835444159 0.2266329 0.2834977 prediction 0.499655518745794 Functional Loss - AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036318 chr4:88036320 nonsynonymous SNV 0.369 1 23 hm5C_associated_SNPs_65326 0 0 3 FMR1 POSTAR2 ENCODE chr4:88036309-88036355
64251 chr1 28863368 28863368 1 + G T LUAD 28863365 + 28863345 28863385 41 TCCAGGCTGCCTGCTGTCTCCTCGGTGGCTTGTGGGGCCTC TCCAGGCTGCCTGCTGTCTCCTCTGTGGCTTGTGGGGCCTC < 41bp 0.914323059081131 0.664496174746186 0.4175411 0.11193696 prediction 0.499653768669891 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863365 chr1:28863368 synonymous SNV . 0 24 hm5C_associated_SNPs_65327 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28863329-28863376
64251 chr20 1115866 1115866 1 + G A rs139986096 1115863 + 1115843 1115883 41 GCTAATGTAAGCAGTCCCCACCGGGAGTTCCCCCCTGCTAC GCTAATGTAAGCAGTCCCCACCGAGAGTTCCCCCCTGCTAC < 41bp 0.754937485631594 0.505111405957347 0.927436 0.56723684 prediction 0.499652159348494 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1115863 chr20:1115866 synonymous SNV . 0 24 hm5C_associated_SNPs_65328 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:1115847-1115869
64251 chr3 122422825 122422825 1 + G T READ 122422822 + 122422802 122422842 41 AATGGTAGCACATCTTCACTCAAGGTTGGGCCTGGTTTTGA AATGGTAGCACATCTTCACTCAATGTTGGGCCTGGTTTTGA < 41bp 0.749819999215656 0.367432024278091 0.9272288 0.46681774 prediction 0.499639998431312 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122422822 chr3:122422825 nonsynonymous SNV 0.182 2 24 hm5C_associated_SNPs_65329 0 0 1 PRPF8 POSTAR2 ENCODE chr3:122422800-122422857
64251 chr3 23959451 23959451 1 + C T BLCA 23959449 + 23959429 23959469 41 TGCTGGCAGTACCGCCAGCTCTCTGCTCTCCACAGGGCTCC TGCTGGCAGTACCGCCAGCTCTTTGCTCTCCACAGGGCTCC < 41bp 0.762337212563303 0.512517992590958 0.12804353 0.10681975 prediction 0.49963843994469 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23959449 chr3:23959451 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_65330 0 0 1 DDX55 POSTAR2 ENCODE chr3:23959404-23959469
64251 chr7 134632279 134632279 1 + G T UCEC 134632277 + 134632257 134632297 41 AGCCGCCCTGGAGGGAGGGCCAGCGTGGACACCAAGGAGGC AGCCGCCCTGGAGGGAGGGCCATCGTGGACACCAAGGAGGC < 41bp 0.749815490396379 0.413285177276631 0.6521001 0.21411133 prediction 0.499630980792758 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134632277 chr7:134632279 nonsynonymous SNV 0.040 0 23 hm5C_associated_SNPs_65332 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:134632267-134632318
64251 chr17 40931130 40931130 1 + G T rs61754308 40931128 + 40931108 40931148 41 CTTCTTACCTCCCACCTTTCCAGGGCTTTCAAAAGGAGACA CTTCTTACCTCCCACCTTTCCATGGCTTTCAAAAGGAGACA < 41bp 0.87648878722653 0.626675057570947 0.8363064 0.21275815 prediction 0.499627459311166 Functional Loss - VPS25 ENSG00000131475 UTR3 Human protein_coding chr17:40931128 chr17:40931130 . . 0 23 hm5C_associated_SNPs_65333 0 0 24 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:40931060-40931140
64251 chr22 18566270 18566270 1 + G T UCEC 18566267 + 18566247 18566287 41 ATGTGGTGGGTGCCTGGCTCCAAGACCCAGCCAATCAAAAC ATGTGGTGGGTGCCTGGCTCCAATACCCAGCCAATCAAAAC < 41bp 0.749812697071137 0.357207886473184 0.19606659 0.06469825 prediction 0.499625394142275 Functional Loss - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18566267 chr22:18566270 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_65336 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:18566270-18566330
64251 chr1 16770220 16770220 1 + G T BRCA 16770217 + 16770197 16770237 41 GCCTACATCAAGCTGGAGGACAGGACGTCAGGTAACCGGAA GCCTACATCAAGCTGGAGGACAGTACGTCAGGTAACCGGAA < 41bp 0.916239951858626 0.666434557284075 0.07444736 0.081778705 prediction 0.499610789149102 Functional Loss - NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16770217 chr1:16770220 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_65340 0 0 1 SRSF1 POSTAR2 ENCODE chr1:16770130-16770239
64251 chrX 48760269 48760269 1 + G T SARC 48760267 + 48760247 48760287 41 GACTGGCGCTGACACCACAGCAGCTGGGCCCCTCTTCCAGC GACTGGCGCTGACACCACAGCATCTGGGCCCCTCTTCCAGC < 41bp 0.749805019091523 0.432467167718489 0.12481552 0.10016915 prediction 0.499610038183045 Functional Loss - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48760267 chrX:48760269 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_65341 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48760259-48760292
64251 chr1 110581882 110581882 1 + G T LUAD 110581879 + 110581859 110581899 41 GATGGCTTGGAAGTCACTGCCAGGGAGAAGAGACTCAAGGT GATGGCTTGGAAGTCACTGCCAGTGAGAAGAGACTCAAGGT < 41bp 0.875706680200067 0.625905033966933 0.9414887 0.42493844 prediction 0.499603292466268 Functional Loss - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110581879 chr1:110581882 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_65342 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:110581874-110581887
64251 chr19 45567717 45567717 1 + G C rs571145118 45567716 + 45567696 45567736 41 GGGGCTACTACCGTTCCGGCCGCCACGCCCGCTCCCGGTCC GGGGCTACTACCGTTCCGGCCCCCACGCCCGCTCCCGGTCC < 41bp 0.857617034581392 0.607817074547879 0.87954473 0.28747123 prediction 0.499599920067026 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567716 chr19:45567717 nonsynonymous SNV 0.232 1 22 hm5C_associated_SNPs_65343 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:45567716-45567772
64251 chr5 133997053 133997053 1 + G T LUAD 133997051 + 133997031 133997071 41 GAATGCCATTACCTGCTTCTCAGAACCCAGCTACTACACCA GAATGCCATTACCTGCTTCTCATAACCCAGCTACTACACCA < 41bp 0.749787658360674 0.410708660465665 0.6788201 0.10899457 prediction 0.499575316721348 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:133997051 chr5:133997053 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_65347 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:133997036-133997067
64251 chr19 47865833 47865833 1 + G C HNSC 47865832 + 47865812 47865852 41 AGAGCAGCGGAAGGGCCGGGCGGGCCGCACGGGCCCCGGAG AGAGCAGCGGAAGGGCCGGGCCGGCCGCACGGGCCCCGGAG < 41bp 0.749787050789865 0.427876796409315 0.86593395 0.72781444 prediction 0.499574101579729 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47865832 chr19:47865833 synonymous SNV . 0 22 hm5C_associated_SNPs_65348 0 0 2 IGF2BP2 POSTAR2 ENCODE chr19:47865732-47865891
64251 chr15 48434255 48434255 1 - G A COAD 48434257 - 48434237 48434277 41 ATATCAAACACATTGGATCCCACGATGTTAGACATAGCCAT ATATCAAACACATTGGATCCCATGATGTTAGACATAGCCAT < 41bp 0.777790743242341 0.528027306597994 0.0137197375 0.033344746 prediction 0.499526873288694 Functional Loss - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48434257 chr15:48434255 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65353 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:48434230-48434266
64251 chr6 126661502 126661502 1 + G C rs41285260 126661501 + 126661481 126661521 41 TTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGT TTCTAAAGCGAGTCTTCAAGCCAAAGAAGCCTCAACTTCGT < 41bp 0.856715521430396 0.606953671179017 0.5383258 0.14471927 prediction 0.499523700502757 Functional Loss - CENPW ENSG00000203760 CDS Human protein_coding chr6:126661501 chr6:126661502 nonsynonymous SNV 0.006 1 22 hm5C_associated_SNPs_65354 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:126661488-126661526
64251 chr5 176863519 176863519 1 + G C rs1130857 176863515 + 176863495 176863535 41 GGGAGCTGGCATGCTGGAGCCGCCGTTCAAGCCTGACGTGA GGGAGCTGGCATGCTGGAGCCGCCCTTCAAGCCTGACGTGA < 41bp 0.799675046738018 0.549917824497493 0.25795949 0.15423563 prediction 0.49951444448105 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863515 chr5:176863519 synonymous SNV . 0 25 hm5C_associated_SNPs_65355 0 0 5 FXR2 POSTAR2 ENCODE chr5:176863489-176863537
64251 chr7 150068918 150068918 1 + G T PAAD 150068915 + 150068895 150068935 41 TGGGACCAGCTAGTTGCCCACAAGCGGGTGCACGTAGCTGA TGGGACCAGCTAGTTGCCCACAATCGGGTGCACGTAGCTGA < 41bp 0.749752554826337 0.354692778523911 0.3630973 0.017992675 prediction 0.499505109652674 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068915 chr7:150068918 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_65357 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150068860-150068920
64251 chr6 26598693 26598693 1 + G T UCEC 26598691 + 26598671 26598711 41 ATGGCTCCTGGACATTTGCCCAGCGTCCTACTGAGCAGGAA ATGGCTCCTGGACATTTGCCCATCGTCCTACTGAGCAGGAA < 41bp 0.749744757816896 0.420489751726486 0.63983476 0.24569845 prediction 0.499489515633792 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598691 chr6:26598693 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_65358 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:26598680-26598700
64251 chr19 10747259 10747259 1 + C T BLCA 10747257 + 10747237 10747277 41 TCTCTGCCTTTGGCCGGGCGCTCAGGTGGGCTGGCGTTGCA TCTCTGCCTTTGGCCGGGCGCTTAGGTGGGCTGGCGTTGCA < 41bp 0.749729815029683 0.493683704824913 0.899382 0.90969545 prediction 0.499459630059365 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10747257 chr19:10747259 synonymous SNV . 0 23 hm5C_associated_SNPs_65363 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10747235-10747261
64251 chr12 13154164 13154164 1 + G T rs139884751 13154161 + 13154141 13154181 41 GCGCCCGAGAGCCCGCGCGTCCCGGGCGTCCGTCGGGGTCC GCGCCCGAGAGCCCGCGCGTCCCTGGCGTCCGTCGGGGTCC < 41bp 0.892913530184911 0.643184146090344 0.84942055 0.38991925 prediction 0.499458768189134 Functional Loss - HTR7P1 ENSG00000183935 ncRNA_exonic Human transcribed_processed_pseudogene chr12:13154161 chr12:13154164 . . 0 24 hm5C_associated_SNPs_65364 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:13154157-13154182
64251 chr12 1755387 1755387 1 + C T UCEC 1755385 + 1755365 1755405 41 TTCGTCAGGTGTAAGAAGTGCACGGAGATCGTGGACCAGTA TTCGTCAGGTGTAAGAAGTGCATGGAGATCGTGGACCAGTA < 41bp 0.757269805698648 0.507544761253616 0.27362794 0.31690788 prediction 0.499450088890063 Functional Loss - WNT5B ENSG00000111186 CDS Human protein_coding chr12:1755385 chr12:1755387 nonsynonymous SNV 0.771 2 23 hm5C_associated_SNPs_65367 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:1755380-1755418
64251 chr17 40716590 40716590 1 + C T SKCM 40716588 + 40716568 40716608 41 GTTGGGGAACCTGCTTCGGCCTCCATATGTAAGCTCCTCTC GTTGGGGAACCTGCTTCGGCCTTCATATGTAAGCTCCTCTC < 41bp 0.833163426892391 0.583441232932216 0.94774604 0.527704 prediction 0.499444387920349 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40716588 chr17:40716590 nonsynonymous SNV 0.874 2 23 hm5C_associated_SNPs_65368 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr17:40716564-40716591
64251 chr2 160043511 160043511 1 + G T LUAD 160043508 + 160043488 160043528 41 TCCGCCGCCCTGGCCTCTCTCAGGAATCTCTATACTCCCAA TCCGCCGCCCTGGCCTCTCTCAGTAATCTCTATACTCCCAA < 41bp 0.912023477620242 0.662319311594923 0.943766 0.5078569 prediction 0.499408332050637 Functional Loss - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160043508 chr2:160043511 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_65374 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr2:160043511-160043530
64251 chr19 44570267 44570267 1 + G T LUAD 44570264 + 44570244 44570284 41 CTTTTCCAGAAGCAGGACCACATGAAGGGTGGTCCTGCCAG CTTTTCCAGAAGCAGGACCACATTAAGGGTGGTCCTGCCAG < 41bp 0.749699374688467 0.369268007624458 0.31528363 0.30332774 prediction 0.499398749376934 Functional Loss - ZNF223 ENSG00000178386;ENSG00000267022 CDS Human other chr19:44570264 chr19:44570267 stopgain 0.215 0 24 hm5C_associated_SNPs_65375 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44570267-44570295
64251 chr10 134014423 134014423 1 + C T STAD 134014421 + 134014401 134014441 41 GCTGTGGGCAAGGACAACTTCGCGCTGATCCCCGAGGGCAC GCTGTGGGCAAGGACAACTTCGTGCTGATCCCCGAGGGCAC < 41bp 0.801156000343894 0.551474803593849 0.23404792 0.20466697 prediction 0.499362393500091 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134014421 chr10:134014423 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_65379 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:134014423-134014424
64251 chr22 24123392 24123392 1 + C T LUAD 24123390 + 24123370 24123410 41 CCCACCCCAGCCAGACGCCCCGCCAGATGCCTGTGAGGCCT CCCACCCCAGCCAGACGCCCCGTCAGATGCCTGTGAGGCCT < 41bp 0.749679452772639 0.486096287347502 0.3943585 0.15687844 prediction 0.499358905545277 Functional Loss - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24123390 chr22:24123392 nonsynonymous SNV 0.741 3 23 hm5C_associated_SNPs_65380 0 0 1 SND1 POSTAR2 ENCODE chr22:24123379-24123411
64251 chr2 109066134 109066134 1 + G C BLCA 109066133 + 109066113 109066153 41 TCACCAGCTACCCCTGGGACCGGGAAATCTAAGGTGAAGAG TCACCAGCTACCCCTGGGACCCGGAAATCTAAGGTGAAGAG < 41bp 0.848884478918883 0.59921779159768 0.86446786 0.42981967 prediction 0.499333374642406 Functional Loss - GCC2 ENSG00000135968 CDS Human protein_coding chr2:109066133 chr2:109066134 nonsynonymous SNV 0.515 2 22 hm5C_associated_SNPs_65387 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109066101-109066145
64251 chr9 125033218 125033218 1 + C T OV 125033216 + 125033196 125033236 41 GCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCT GCATGGTCCACCCTACCTTTCGTAATTATCTTGCAGCCTCT < 41bp 0.797185742957405 0.547522043135823 0.40321684 0.530396 prediction 0.499327399643164 Functional Loss - MRRF ENSG00000148187 CDS Human protein_coding chr9:125033216 chr9:125033218 synonymous SNV . 0 23 hm5C_associated_SNPs_65390 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:125033199-125033224
64251 chr16 30012333 30012333 1 + C T SKCM 30012331 + 30012311 30012351 41 ACAGGGTTTCCCCTTCAGGCCTCCGGGGTCCCCTCCCCATA ACAGGGTTTCCCCTTCAGGCCTTCGGGGTCCCCTCCCCATA < 41bp 0.749652176279427 0.496963911406308 0.20644057 0.15718785 prediction 0.499304352558855 Functional Loss - INO80E ENSG00000169592 CDS Human protein_coding chr16:30012331 chr16:30012333 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_65395 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:30012312-30012349
64251 chrX 70612510 70612510 1 + C T ESCA 70612508 + 70612488 70612528 41 GTGACTGGGGTGGCAGATCCCACGGGGTGTGGTGAAGGATT GTGACTGGGGTGGCAGATCCCATGGGGTGTGGTGAAGGATT < 41bp 0.78549264851426 0.535844281092982 0.8856816 0.8861019 prediction 0.499296734842555 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70612508 chrX:70612510 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_65397 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70612509-70612534
64251 chr12 83526012 83526012 1 + G T LUAD 83526010 + 83525990 83526030 41 ATCCGGCTGCTTTGATGAACCTGGGAGCCATTCTGCACCTC ATCCGGCTGCTTTGATGAACCTTGGAGCCATTCTGCACCTC < 41bp 0.749643320956713 0.439668048059442 0.2129609 0.034148604 prediction 0.499286641913425 Functional Loss - TMTC2 ENSG00000179104 CDS Human protein_coding chr12:83526010 chr12:83526012 synonymous SNV . 0 23 hm5C_associated_SNPs_65398 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:83526000-83526038
64251 chr2 121036307 121036307 1 + G C BLCA 121036306 + 121036286 121036326 41 AAGGTGATCATGGTTGGCAGCGGAGGCGTTGGCAAGTCAGC AAGGTGATCATGGTTGGCAGCCGAGGCGTTGGCAAGTCAGC < 41bp 0.749635571812791 0.443294247787517 0.9261718 0.83559036 prediction 0.499271143625583 Functional Loss - RALB ENSG00000144118 CDS Human protein_coding chr2:121036306 chr2:121036307 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_65400 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:121036291-121036316
64251 chr9 80881427 80881427 1 + C T SKCM 80881425 + 80881405 80881445 41 CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTT CTTTCCTGTCCCAGTTTCTACTTCAGAGGGCTTAGGAACTT < 41bp 0.749633694215317 0.480588006879842 0.9587854 0.29453978 prediction 0.499267388430633 Functional Loss - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80881425 chr9:80881427 nonsynonymous SNV 0.075 0 23 hm5C_associated_SNPs_65401 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:80881423-80881453
64251 chr6 26273260 26273260 1 + G C OV 26273256 + 26273236 26273276 41 GAAGAAGGGCTCCAAGAAGGCGGTGACCAAGGCACAGAAGA GAAGAAGGGCTCCAAGAAGGCGGTCACCAAGGCACAGAAGA < 41bp 0.749617372377132 0.474400313689968 0.32904905 0.16080523 prediction 0.499234744754264 Functional Loss - HIST1H2BI ENSG00000168242 CDS Human other chr6:26273256 chr6:26273260 synonymous SNV . 0 25 hm5C_associated_SNPs_65404 0 0 1 GRWD1 POSTAR2 ENCODE chr6:26273225-26273310
64251 chr6 148664255 148664255 1 + G C CESC 148664254 + 148664234 148664274 41 CCGGAGCCTGAGCCCGAGCCCGAGCCGGAGCCCGAGCCCGC CCGGAGCCTGAGCCCGAGCCCCAGCCGGAGCCCGAGCCCGC < 41bp 0.749606550230705 0.452437880354899 0.5004936 0.39421922 prediction 0.499213100461409 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148664254 chr6:148664255 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_65405 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:148664255-148664256
64251 chr17 40940182 40940182 1 + G T GBM 40940179 + 40940159 40940199 41 ATCCATTCCACGTTCTGGCCCTGGAAGTGACTTTTCCCCCG ATCCATTCCACGTTCTGGCCCTGTAAGTGACTTTTCCCCCG < 41bp 0.749599509028647 0.351154948726217 0.1365346 0.029541701 prediction 0.499199018057293 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40940179 chr17:40940182 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_65408 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40940152-40940190
64251 chr5 112227772 112227772 1 + G T UCEC 112227769 + 112227749 112227789 41 AGGAAGCTGTGCAGAAGATGCTGGATCAGGCTGAAAATGAT AGGAAGCTGTGCAGAAGATGCTGTATCAGGCTGAAAATGAT < 41bp 0.893650599773941 0.644069034315496 0.14573693 0.026310503 prediction 0.49916313091689 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112227769 chr5:112227772 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_65415 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:112227742-112227775
64251 chr2 3425708 3425708 1 + C T UCEC 3425706 + 3425686 3425726 41 GCGGACGTCTCCTCACAGCCCACGGCCAGGGCTACGGCAAG GCGGACGTCTCCTCACAGCCCATGGCCAGGGCTACGGCAAG < 41bp 0.749571290439924 0.4850258469426 0.19158322 0.14563528 prediction 0.499142580879848 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3425706 chr2:3425708 synonymous SNV . 0 23 hm5C_associated_SNPs_65419 0 0 4 BUD13 POSTAR2 ENCODE chr2:3425618-3425731
64251 chr3 38411552 38411552 1 + G T UCEC 38411550 + 38411530 38411570 41 TTTCCTTCCTTCCTCAGGTTCTGGAATGAATTTGTTGCAGA TTTCCTTCCTTCCTCAGGTTCTTGAATGAATTTGTTGCAGA < 41bp 0.749571158547429 0.415286962019482 0.2605221 0.058292776 prediction 0.499142317094859 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38411550 chr3:38411552 stopgain 0.996 1 23 hm5C_associated_SNPs_65420 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr3:38411512-38411557
64251 chr22 41553249 41553249 1 + A T UCEC 41553245 + 41553225 41553265 41 AGTTAGACACTGGACAGTATCAGGAGCCCTGGCAGTATGTC AGTTAGACACTGGACAGTATCAGGTGCCCTGGCAGTATGTC < 41bp 0.749566541037408 0.429225712443643 0.9425107 0.9383099 prediction 0.499133082074816 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41553245 chr22:41553249 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_65422 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41553190-41553268
64251 chr15 31619950 31619950 1 + G C BLCA 31619949 + 31619929 31619969 41 GCGGGCTGCGAGAAAGTTTACGGGAAATCTTCGCACCTCAA GCGGGCTGCGAGAAAGTTTACCGGAAATCTTCGCACCTCAA < 41bp 0.840063882649587 0.59050064020715 0.9139918 0.8606378 prediction 0.499126484884874 Functional Loss - KLF13 ENSG00000169926 CDS Human protein_coding chr15:31619949 chr15:31619950 nonsynonymous SNV 0.906 3 22 hm5C_associated_SNPs_65423 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:31619944-31619970
64251 chr2 190660536 190660536 1 + G T rs143323454 190660533 + 190660513 190660553 41 AAAATTGAGGTGCGAGATAACGGGGAGGGTATCAAGGCTGT AAAATTGAGGTGCGAGATAACGGTGAGGGTATCAAGGCTGT < 41bp 0.892683599559727 0.643132383985173 0.922631 0.7392849 prediction 0.499102431149108 Functional Loss - PMS1 ENSG00000064933 CDS Human protein_coding chr2:190660533 chr2:190660536 synonymous SNV . 0 24 hm5C_associated_SNPs_65427 1 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:190660512-190660545
64251 chr1 64117380 64117380 1 + A T UCEC 64117376 + 64117356 64117396 41 GTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGA GTGGAAGCTGAGGGCGCAAACAAATTGATGAAGGACTTGGA < 41bp 0.749549929842458 0.427370196806319 0.87331235 0.8166115 prediction 0.499099859684917 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64117376 chr1:64117380 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_65428 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:64117367-64117388
64251 chr9 133753871 133753871 1 + A C STAD 133753870 + 133753850 133753890 41 ACCCGGGAATTGACCTGTCCCAGGTGTATGAGCTGCTAGAG ACCCGGGAATTGACCTGTCCCCGGTGTATGAGCTGCTAGAG < 41bp 0.749541155300231 0.479574610241249 0.841738 0.23002419 prediction 0.499082310600462 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133753870 chr9:133753871 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_65430 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:133753863-133753951
64251 chr7 66418350 66418350 1 + C T COAD 66418348 + 66418328 66418368 41 AGAGCAATCCTGAATTTTGTCCCGAGAAGGTGAGCGGTGGA AGAGCAATCCTGAATTTTGTCCTGAGAAGGTGAGCGGTGGA < 41bp 0.807606013809242 0.558065203164047 0.25824255 0.19343066 prediction 0.499081621290392 Functional Loss - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66418348 chr7:66418350 synonymous SNV . 0 23 hm5C_associated_SNPs_65431 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:66418317-66418362
64251 chr20 36687860 36687860 1 + G C LIHC 36687859 + 36687839 36687879 41 CATCAGGGGATGCTACTGTCCGACAGAAAATTGCTTCTCTG CATCAGGGGATGCTACTGTCCCACAGAAAATTGCTTCTCTG < 41bp 0.851705437249839 0.602171236968189 0.17307138 0.041944772 prediction 0.4990684005633 Functional Loss - RPRD1B ENSG00000101413 CDS Human protein_coding chr20:36687859 chr20:36687860 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_65433 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:36687810-36687860
64251 chr17 3565782 3565782 1 + G T rs80249487 3565779 + 3565759 3565799 41 ACGTGGGGTTGTGTCCCTCGCTGGGATACACGGAGTGCCCT ACGTGGGGTTGTGTCCCTCGCTGTGATACACGGAGTGCCCT < 41bp 0.872691000616872 0.623162798585952 0.4597617 0.10960528 prediction 0.499056404061841 Functional Loss - CTNS ENSG00000040531;ENSG00000213977;ENSG00000257950 downstream Human other chr17:3565779 chr17:3565782 . . 0 24 hm5C_associated_SNPs_65435 2 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:3565760-3565791
64251 chr7 75517458 75517458 1 + C T SKCM 75517456 + 75517436 75517476 41 CGGGCACATGCCCACCTTGCCTCCGTACCAGCCTGCCTCCG CGGGCACATGCCCACCTTGCCTTCGTACCAGCCTGCCTCCG < 41bp 0.762096295914735 0.512568999940455 0.4367098 0.07014361 prediction 0.499054591948561 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517456 chr7:75517458 nonsynonymous SNV 0.934 1 23 hm5C_associated_SNPs_65436 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:75517442-75517480
64251 chr4 78815401 78815401 1 + C T HNSC 78815399 + 78815379 78815419 41 TAAAAAATATCCAAAGCTTTCTCGAAGTAAGAGAATTCCTA TAAAAAATATCCAAAGCTTTCTTGAAGTAAGAGAATTCCTA < 41bp 0.801878488587689 0.552353410354904 0.21410093 0.06448287 prediction 0.49905015646557 Functional Loss - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78815399 chr4:78815401 stopgain 0.091 1 23 hm5C_associated_SNPs_65438 0 0 1 PRPF8 POSTAR2 ENCODE chr4:78815386-78815440
64251 chr9 135906488 135906488 1 + G T CESC 135906486 + 135906466 135906506 41 GCATGGTGTGCGTGGAGTACCCGGGAGTGGTGCGTGATGTG GCATGGTGTGCGTGGAGTACCCTGGAGTGGTGCGTGATGTG < 41bp 0.749521027548367 0.40847987173089 0.87386096 0.2039991 prediction 0.499042055096734 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906486 chr9:135906488 synonymous SNV . 0 23 hm5C_associated_SNPs_65440 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:135906473-135906494
64251 chr16 81739151 81739151 1 + C T PAAD 81739149 + 81739129 81739169 41 TGTCGGAACACCTCACCATGCTCCAGGTGCTGAACCTGTGC TGTCGGAACACCTCACCATGCTTCAGGTGCTGAACCTGTGC < 41bp 0.749517209824718 0.452995343003067 0.9060935 0.3557822 prediction 0.499034419649435 Functional Loss - CMIP ENSG00000153815 CDS Human protein_coding chr16:81739149 chr16:81739151 synonymous SNV . 0 23 hm5C_associated_SNPs_65441 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:81739146-81739164
64251 chr19 1255036 1255036 1 + G T LUAD 1255034 + 1255014 1255054 41 GAGCTTTGTGAATCACGCCCCGGGGGTCTTCTCAGGGACCT GAGCTTTGTGAATCACGCCCCGTGGGTCTTCTCAGGGACCT < 41bp 0.749512465035759 0.396314101394765 0.85604167 0.06313124 prediction 0.499024930071517 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1255034 chr19:1255036 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_65443 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1254993-1255040
64251 chr2 118579520 118579520 1 + C T COAD 118579518 + 118579498 118579538 41 TTAAGGAGCTGATGACTCACCACGTGCATACCTATGGCTTG TTAAGGAGCTGATGACTCACCATGTGCATACCTATGGCTTG < 41bp 0.778734286093313 0.529232326891909 0.67255056 0.47536117 prediction 0.499003918402808 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579518 chr2:118579520 synonymous SNV . 0 23 hm5C_associated_SNPs_65449 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579468-118579536
64251 chr11 128781781 128781781 1 + A T UCEC 128781777 + 128781757 128781797 41 GCGGAGACCCTCATGTTTTCCAACAACGCAGTCATCTCCAT GCGGAGACCCTCATGTTTTCCAACTACGCAGTCATCTCCAT < 41bp 0.749483120871037 0.417507707360304 0.13041952 0.2519641 prediction 0.498966241742073 Functional Loss - KCNJ5 ENSG00000120457 CDS Human protein_coding chr11:128781777 chr11:128781781 nonsynonymous SNV 0.962 3 25 hm5C_associated_SNPs_65454 0 0 1 DGCR8 POSTAR2 ENCODE chr11:128781754-128781796
64251 chr3 179336216 179336216 1 + G T UCEC 179336213 + 179336193 179336233 41 TCTCTTGTAGCATCCCATATCAAGATGGATTGCCCGTAATT TCTCTTGTAGCATCCCATATCAATATGGATTGCCCGTAATT < 41bp 0.749474018070338 0.396093590602254 0.9270033 0.084560275 prediction 0.498948036140675 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179336213 chr3:179336216 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_65456 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr3:179336210-179336236
64251 chr11 93528151 93528151 1 + C T SKCM 93528149 + 93528129 93528169 41 AGAAATTTTTGCACAGCTCTCTCGGGAAGCTGTTCAAATTA AGAAATTTTTGCACAGCTCTCTTGGGAAGCTGTTCAAATTA < 41bp 0.749472315156098 0.467882310810223 0.064608365 0.066551834 prediction 0.498944630312196 Functional Loss - MED17 ENSG00000042429 CDS Human protein_coding chr11:93528149 chr11:93528151 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_65459 0 0 1 GPKOW POSTAR2 ENCODE chr11:93528062-93528185
64251 chr19 1207118 1207118 1 + C T CESC 1207116 + 1207096 1207136 41 AAGGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGGAG AAGGTGAAGGAGGTGCTGGACTTGGAGACGCTGTGCAGGAG < 41bp 0.756125732227074 0.506663544655468 0.13789704 0.13495532 prediction 0.49892437514321 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207116 chr19:1207118 nonsynonymous SNV 0.916 3 23 hm5C_associated_SNPs_65460 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1207054-1207138
64251 chr5 153792490 153792490 1 + C T rs35448914 153792488 + 153792468 153792508 41 GGCTGTGTGCAGACACAAAGCACGGGGCCTTGGGCTCCCCA GGCTGTGTGCAGACACAAAGCATGGGGCCTTGGGCTCCCCA < 41bp 0.749443963465809 0.489837860535212 0.8825953 0.739628 prediction 0.498887926931619 Functional Loss - GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153792488 chr5:153792490 synonymous SNV . 0 23 hm5C_associated_SNPs_65467 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153792469-153792491
64251 chr6 34803959 34803959 1 + G T UCEC 34803957 + 34803937 34803977 41 CTCCACCAGCCCCCAGTGCCCAGCAGTCCTGGGCCCAGGCA CTCCACCAGCCCCCAGTGCCCATCAGTCCTGGGCCCAGGCA < 41bp 0.749433312774582 0.392946196339921 0.26452988 0.049824953 prediction 0.498866625549164 Functional Loss - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34803957 chr6:34803959 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_65469 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:34803916-34803960
64251 chr16 77228397 77228397 1 + A C HNSC 77228396 + 77228376 77228416 41 CCCGCATCTTCGCACACAAGCAGAACTATGACCTCCGCCGC CCCGCATCTTCGCACACAAGCCGAACTATGACCTCCGCCGC < 41bp 0.787315888264911 0.537889650972858 0.6277868 0.13513258 prediction 0.498852474584106 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228396 chr16:77228397 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_65470 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:77228366-77228425
64251 chr1 206623757 206623757 1 + C T SKCM 206623755 + 206623735 206623775 41 AGCCCTCATGGAGAGACTACCTCGGTTGAAGACTCAACCCA AGCCCTCATGGAGAGACTACCTTGGTTGAAGACTCAACCCA < 41bp 0.749426140719807 0.467705854188591 0.26496062 0.0810177 prediction 0.498852281439614 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206623755 chr1:206623757 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_65471 0 0 4 BUD13 POSTAR2 ENCODE chr1:206623716-206623776
64251 chr2 73478511 73478511 1 + G T LUSC 73478508 + 73478488 73478528 41 ACGCCAGCTGTGTGACAATGCTGGCTTTGATGCCACAAACA ACGCCAGCTGTGTGACAATGCTGTCTTTGATGCCACAAACA < 41bp 0.749424274935382 0.354236240790646 0.22617912 0.08944696 prediction 0.498848549870764 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73478508 chr2:73478511 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65472 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73478468-73478527
64251 chr20 25261605 25261605 1 + C T rs2228978 25261603 + 25261583 25261623 41 AGCACGTGGCCGCGCTGTTTCCCGGCGATGTGGACCGCCTG AGCACGTGGCCGCGCTGTTTCCTGGCGATGTGGACCGCCTG < 41bp 0.7754387155398 0.526015627019425 0.91436386 0.64287466 prediction 0.498846177040749 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25261603 chr20:25261605 synonymous SNV . 0 23 hm5C_associated_SNPs_65474 0 0 5 BUD13 POSTAR2 ENCODE chr20:25261577-25261638
64251 chr1 210415098 210415098 1 + G T UCEC 210415095 + 210415075 210415115 41 CTTTCAATGGCACCTCTGCCCAAGAGTGGTTTATGGCTCAA CTTTCAATGGCACCTCTGCCCAATAGTGGTTTATGGCTCAA < 41bp 0.914050106989949 0.664631145026369 0.8730732 0.34181917 prediction 0.49883792392716 Functional Loss - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415095 chr1:210415098 stopgain 0.998 1 24 hm5C_associated_SNPs_65477 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:210415072-210415098
64251 chr2 239040038 239040038 1 + G C HNSC 239040034 + 239040014 239040054 41 GAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTT GAGCACCTGGGCACCCACGGCTGGCAGGCTGTGCGCGCCTT < 41bp 0.825562532860235 0.576154885144084 0.88390243 0.43152156 prediction 0.4988152954323 Functional Loss - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239040034 chr2:239040038 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_65478 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:239040024-239040044
64251 chr5 64920635 64920635 1 + A T rs564028676 64920631 + 64920611 64920651 41 CCTAGGGGTGGTTTCTTTTCCTGCAGTCGCGATGTGTGATT CCTAGGGGTGGTTTCTTTTCCTGCTGTCGCGATGTGTGATT < 41bp 0.815772620380134 0.566374356202779 0.049408942 0.0144409835 prediction 0.498796528354709 Functional Loss - TRAPPC13 ENSG00000113597;ENSG00000253251 UTR5 Human other chr5:64920631 chr5:64920635 . . 0 25 hm5C_associated_SNPs_65480 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:64920616-64920644
64251 chr12 124103227 124103227 1 + G T UCEC 124103225 + 124103205 124103245 41 TGTGTGTGTAGTGCCCCCTGCAGGAGATGAAGCCCCAGAGA TGTGTGTGTAGTGCCCCCTGCATGAGATGAAGCCCCAGAGA < 41bp 0.891031344395471 0.64163486919857 0.90422624 0.36588538 prediction 0.498792950393801 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124103225 chr12:124103227 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_65481 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr12:124103118-124103242
64251 chr22 20760622 20760622 1 + C T SKCM 20760620 + 20760600 20760640 41 ACAGCCGCTCGCGCCTCACCCTCCACCAGAGGACGCACACG ACAGCCGCTCGCGCCTCACCCTTCACCAGAGGACGCACACG < 41bp 0.762859705194106 0.513468544013332 0.9336326 0.044144362 prediction 0.498782322361549 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760620 chr22:20760622 synonymous SNV . 0 23 hm5C_associated_SNPs_65484 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:20760620-20760640
64251 chr15 77776884 77776884 1 + A C rs139827665 77776883 + 77776863 77776903 41 GCTACACCATCCTGTCTTCTCAGCATCTCCTTGCCTGTTTT GCTACACCATCCTGTCTTCTCCGCATCTCCTTGCCTGTTTT < 41bp 0.749388057094078 0.499289421227056 0.16743189 0.08141178 prediction 0.498776114188155 Functional Loss - HMG20A ENSG00000140382 UTR3 Human protein_coding chr15:77776883 chr15:77776884 . . 0 22 hm5C_associated_SNPs_65486 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:77776852-77776897
64251 chr9 131233674 131233674 1 + G T SARC 131233671 + 131233651 131233691 41 TGGAGGAGGTGGCCCACGAACTGGCTGAGACTGAGCACGAG TGGAGGAGGTGGCCCACGAACTGTCTGAGACTGAGCACGAG < 41bp 0.749373958519965 0.383650249216113 0.24249545 0.053919464 prediction 0.498747917039931 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131233671 chr9:131233674 nonsynonymous SNV 0.023 1 24 hm5C_associated_SNPs_65490 0 0 10 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr9:131233660-131233680
64251 chr19 53959230 53959230 1 + G T LUAD 53959227 + 53959207 53959247 41 AAGACATAGGAGAATTCATACTGGAGAGAAACCATACAAGT AAGACATAGGAGAATTCATACTGTAGAGAAACCATACAAGT < 41bp 0.749370008317908 0.391630314783031 0.18229118 0.02287209 prediction 0.498740016635817 Functional Loss - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53959227 chr19:53959230 . 0.024 2 24 hm5C_associated_SNPs_65491 0 0 1 UCHL5 POSTAR2 ENCODE chr19:53959228-53959301
64251 chr5 96314940 96314940 1 + G T OV 96314937 + 96314917 96314957 41 AAGAGCCTTGTTTACATCCTCTAGAGCCTGATGAGGTGGAA AAGAGCCTTGTTTACATCCTCTATAGCCTGATGAGGTGGAA < 41bp 0.749360525544123 0.372683132868244 0.1795415 0.123437315 prediction 0.498721051088247 Functional Loss - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96314937 chr5:96314940 stopgain 0.996 1 24 hm5C_associated_SNPs_65493 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr5:96314919-96314940
64251 chr18 13056532 13056532 1 + G T UCEC 13056529 + 13056509 13056549 41 CTGTGGCTGTGGGAATTTGTCTAGGATCAAATATCGGCTCT CTGTGGCTGTGGGAATTTGTCTATGATCAAATATCGGCTCT < 41bp 0.749355906613207 0.382720629599203 0.6829281 0.09697747 prediction 0.498711813226414 Functional Loss - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056529 chr18:13056532 stopgain 0.011 1 24 hm5C_associated_SNPs_65495 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr18:13056520-13056540
64251 chr6 71570005 71570005 1 + G T HNSC 71570003 + 71569983 71570023 41 AGGATGGTCTGGAAGCTCATCAGGTCAGACTCTCAGCACAC AGGATGGTCTGGAAGCTCATCATGTCAGACTCTCAGCACAC < 41bp 0.749344160764936 0.418868927517234 0.87545127 0.36907178 prediction 0.498688321529873 Functional Loss - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71570003 chr6:71570005 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_65498 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr6:71569977-71570005
64251 chr14 24109060 24109060 1 + C T rs146755306 24109058 + 24109038 24109078 41 GTGCAGCGCAGGGGTCAACCCTCTGGTAGGGAGCACTCTGG GTGCAGCGCAGGGGTCAACCCTTTGGTAGGGAGCACTCTGG < 41bp 0.800257065550545 0.550913540867185 0.25523877 0.10285166 prediction 0.49868704936672 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24109058 chr14:24109060 synonymous SNV . 0 23 hm5C_associated_SNPs_65499 0 0 13 DDX24 POSTAR2 ENCODE chr14:24109008-24109096
64251 chr12 104458418 104458418 1 + G C LUAD 104458414 + 104458394 104458434 41 TCCCCCGCGCCCGGCACGGACACCGAGCGGTGGCCATCCGG TCCCCCGCGCCCGGCACGGACACCCAGCGGTGGCCATCCGG < 41bp 0.811888940609578 0.562545997960217 0.532802 0.20735046 prediction 0.498685885298721 Functional Loss - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104458414 chr12:104458418 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_65500 0 0 1 EIF3H POSTAR2 ENCODE chr12:104458314-104458426
64251 chr12 6947196 6947196 1 + C T rs78623250 6947194 + 6947174 6947214 41 GAGCCCAACGCCCTCACTGTCACGGTGCGTGGAGTGGGGGG GAGCCCAACGCCCTCACTGTCATGGTGCGTGGAGTGGGGGG < 41bp 0.768859858643517 0.519517298352855 0.5328565 0.8953928 prediction 0.498685120581323 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6947194 chr12:6947196 nonsynonymous SNV 0.943 3 23 hm5C_associated_SNPs_65501 0 0 5 GRWD1 POSTAR2 ENCODE chr12:6947149-6947203
64251 chr2 75113620 75113620 1 + C T LGG 75113618 + 75113598 75113638 41 GGTATCCTGTGATTGGCAGGCACGGGCAGCAATGCCTGCTA GGTATCCTGTGATTGGCAGGCATGGGCAGCAATGCCTGCTA < 41bp 0.792194371650817 0.542881859185472 0.63681424 0.83411705 prediction 0.49862502493069 Functional Loss - HK2 ENSG00000159399 CDS Human protein_coding chr2:75113618 chr2:75113620 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_65507 0 0 7 BUD13 POSTAR2 ENCODE chr2:75113612-75113648
64251 chrX 46322677 46322677 1 + G T UCEC 46322675 + 46322655 46322695 41 TGTGATCTTCAGGTTGGGACCAGGTGAAGAGTCCTGGATGG TGTGATCTTCAGGTTGGGACCATGTGAAGAGTCCTGGATGG < 41bp 0.890043586404681 0.640731733008521 0.9259654 0.56653655 prediction 0.49862370679232 Functional Loss - KRBOX4 ENSG00000147121 CDS Human protein_coding chrX:46322675 chrX:46322677 nonsynonymous SNV 0.976 3 23 hm5C_associated_SNPs_65508 0 0 3 GRWD1 POSTAR2 ENCODE chrX:46322647-46322742
64251 chr11 62434322 62434322 1 + G T SARC 62434320 + 62434300 62434340 41 ATGCTGTTGCCCGGGGAGGTCTGCCTAGGGCTTACCAGCTT ATGCTGTTGCCCGGGGAGGTCTTCCTAGGGCTTACCAGCTT < 41bp 0.749301695969468 0.417719502001986 0.26318884 0.22089425 prediction 0.498603391938937 Functional Loss - METTL12 ENSG00000214756 CDS Human protein_coding chr11:62434320 chr11:62434322 synonymous SNV . 0 23 hm5C_associated_SNPs_65510 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62434308-62434342
64251 chr14 101350883 101350883 1 + G T LUSC 101350881 + 101350861 101350901 41 CTATTTCCTTACGTGGGCCACTGGATGGCTCCTCCATGTCT CTATTTCCTTACGTGGGCCACTTGATGGCTCCTCCATGTCT < 41bp 0.863352429782702 0.6140508046633 0.20842609 0.057229817 prediction 0.498603250238804 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101350881 chr14:101350883 synonymous SNV . 0 23 hm5C_associated_SNPs_65511 0 0 2 DGCR8 POSTAR2 ENCODE chr14:101350881-101350899
64251 chr21 35446045 35446045 1 + G T rs571440239 35446043 + 35446023 35446063 41 TAATCCTGAAAGCCATGCAGCGGGTAAGTGACCTTCCCTCA TAATCCTGAAAGCCATGCAGCGTGTAAGTGACCTTCCCTCA < 41bp 0.749300535863613 0.416652432342636 0.85972524 0.36052445 prediction 0.498601071727226 Functional Loss - MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35446043 chr21:35446045 synonymous SNV . 0 23 hm5C_associated_SNPs_65512 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:35446031-35446052
64251 chr19 47634280 47634280 1 + G T UCEC 47634278 + 47634258 47634298 41 GCCTGTGGGGACTGGAGGCCCAGAAACGGTCAGGGCCGGCG GCCTGTGGGGACTGGAGGCCCATAAACGGTCAGGGCCGGCG < 41bp 0.879226794799689 0.62992731992798 0.43455595 0.3034113 prediction 0.498598949743418 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47634278 chr19:47634280 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_65513 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:47634253-47634280
64251 chr15 80478483 80478483 1 + G T LUAD 80478480 + 80478460 80478500 41 CCTCTGTTCCAGGGTACTGCCAGGGGGATGGTTACCGCATC CCTCTGTTCCAGGGTACTGCCAGTGGGATGGTTACCGCATC < 41bp 0.918282503720356 0.668991105652782 0.9432571 0.47662452 prediction 0.498582796135149 Functional Loss - FAH ENSG00000103876 CDS Human protein_coding chr15:80478480 chr15:80478483 nonsynonymous SNV 0.893 5 24 hm5C_associated_SNPs_65516 0 0 4 BUD13 POSTAR2 ENCODE chr15:80478451-80478520
64251 chr16 28847784 28847784 1 + G T LUSC 28847781 + 28847761 28847801 41 CCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCTGACTTAG CCTCCCCAGCTCTCAGTGACCCCTACTGTCTCCTGACTTAG < 41bp 0.749287456238984 0.373743203477092 0.09968874 0.11202803 prediction 0.498574912477969 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847781 chr16:28847784 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_65517 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chr16 28847783 28847783 1 + C T UCEC 28847781 + 28847761 28847801 41 CCTCCCCAGCTCTCAGTGACCCCGACTGTCTCCTGACTTAG CCTCCCCAGCTCTCAGTGACCCTGACTGTCTCCTGACTTAG < 41bp 0.749287456238984 0.497172879018097 0.09968874 0.039487094 prediction 0.498574912477969 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847781 chr16:28847783 synonymous SNV . 0 23 hm5C_associated_SNPs_65518 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:28847732-28847784
64251 chr19 58718460 58718460 1 + G T UCEC 58718457 + 58718437 58718477 41 TGCTGGTGCTGGAGCAGTTCCTAGGTGCACTGCCTGTGAAG TGCTGGTGCTGGAGCAGTTCCTATGTGCACTGCCTGTGAAG < 41bp 0.823608125848489 0.574336041622342 0.88547444 0.21671626 prediction 0.498544168452293 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58718457 chr19:58718460 nonsynonymous SNV 0.069 2 24 hm5C_associated_SNPs_65520 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:58718426-58718460
64251 chr7 148951066 148951066 1 + G T PAAD 148951064 + 148951044 148951084 41 GTCTTGTACACCTGAGGAGCCAGAGGAGAGCCTTAGGCCCA GTCTTGTACACCTGAGGAGCCATAGGAGAGCCTTAGGCCCA < 41bp 0.749269737760021 0.397994405638549 0.89365256 0.7984206 prediction 0.498539475520043 Functional Loss - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148951064 chr7:148951066 stopgain 0.845 0 23 hm5C_associated_SNPs_65522 0 0 1 RBM15 POSTAR2 ENCODE chr7:148951048-148951090
64251 chr3 186760727 186760727 1 + G T BLCA 186760725 + 186760705 186760745 41 CACAGGGGCCGCCAGACCCTCGGCAGTCTCAGAGGCCTAGC CACAGGGGCCGCCAGACCCTCGTCAGTCTCAGAGGCCTAGC < 41bp 0.88505635887524 0.635790736243877 0.87899685 0.10790038 prediction 0.498531245262726 Functional Loss - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186760725 chr3:186760727 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_65526 0 0 4 DDX3X POSTAR2 ENCODE chr3:186760651-186760729
64251 chr7 106509129 106509129 1 + C T PRAD 106509127 + 106509107 106509147 41 CATTGATATCCCCGTCCTGCCTCGGAACACCGACCTCACAG CATTGATATCCCCGTCCTGCCTTGGAACACCGACCTCACAG < 41bp 0.819045039431308 0.569780962788496 0.07204887 0.019875854 prediction 0.498528153285625 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509127 chr7:106509129 nonsynonymous SNV 0.113 3 23 hm5C_associated_SNPs_65527 0 0 1 FMR1 POSTAR2 ENCODE chr7:106509112-106509144
64251 chr10 75533198 75533198 1 + C T SKCM 75533196 + 75533176 75533216 41 GACTGGATGCCGAACAATCACTCCGTCATCCTGATTGATGA GACTGGATGCCGAACAATCACTTCGTCATCCTGATTGATGA < 41bp 0.801389364300359 0.552131129059298 0.2070764 0.024279386 prediction 0.498516470482121 Functional Loss - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75533196 chr10:75533198 nonsynonymous SNV 0.955 4 23 hm5C_associated_SNPs_65529 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:75533192-75533207
64251 chr3 119190201 119190201 1 + G T UCEC 119190198 + 119190178 119190218 41 CCTTTCCGAGGAGGCATCTCCAGGAAGATGATGGCAGAGGT CCTTTCCGAGGAGGCATCTCCAGTAAGATGATGGCAGAGGT < 41bp 0.894335674350252 0.64508607361067 0.7836223 0.20285508 prediction 0.498499201479164 Functional Loss - POGLUT1 ENSG00000163389 CDS Human protein_coding chr3:119190198 chr3:119190201 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_65533 0 0 1 UCHL5 POSTAR2 ENCODE chr3:119190156-119190300
64251 chr1 90181888 90181888 1 + G T rs534383763 90181885 + 90181865 90181905 41 CCCATGATACCGAGGGATGACTGGATATTAATCGATTTCCC CCCATGATACCGAGGGATGACTGTATATTAATCGATTTCCC < 41bp 0.885359363924757 0.636127863845326 0.25941575 0.080183834 prediction 0.498463000158862 Functional Loss - LRRC8C ENSG00000171488 UTR3 Human protein_coding chr1:90181885 chr1:90181888 . . 0 24 hm5C_associated_SNPs_65537 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr1:90181870-90181910
64251 chr3 16346793 16346793 1 + G T rs9852706 16346791 + 16346771 16346811 41 CAAAGTGAGCATCTCCAGTGCAGCATGGGATGGGAAGATAG CAAAGTGAGCATCTCCAGTGCATCATGGGATGGGAAGATAG < 41bp 0.818449969864665 0.569227985486456 0.34706113 0.26382828 prediction 0.498443968756419 Functional Loss - OXNAD1 ENSG00000154814 UTR3 Human protein_coding chr3:16346791 chr3:16346793 . . 0 23 hm5C_associated_SNPs_65540 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:16346777-16346807
64251 chr7 143079460 143079460 1 + G T PAAD 143079457 + 143079437 143079477 41 AATCATTTCCCCCTGCGCCTCTGGAGGAGGAGATCTTCCCT AATCATTTCCCCCTGCGCCTCTGTAGGAGGAGATCTTCCCT < 41bp 0.910822728481577 0.66160439751491 0.4333139 0.20435977 prediction 0.498436661933334 Functional Loss - ZYX ENSG00000159840 CDS Human protein_coding chr7:143079457 chr7:143079460 stopgain 1.000 0 24 hm5C_associated_SNPs_65542 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:143079429-143079485
64251 chr7 23239850 23239850 1 + G T LUSC 23239847 + 23239827 23239867 41 CTTTAGTTTTAAAACAAACTCTGGATTTGCTGCTGCCTCTT CTTTAGTTTTAAAACAAACTCTGTATTTGCTGCTGCCTCTT < 41bp 0.90980961428868 0.660596776853972 0.2691064 0.06863031 prediction 0.498425674869415 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23239847 chr7:23239850 nonsynonymous SNV 0.584 0 24 hm5C_associated_SNPs_65543 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:23239824-23239861
64251 chr3 51708435 51708435 1 + G T LUAD 51708433 + 51708413 51708453 41 GGCTGGGGTGGAAGTGAGTGCTGGGTCACCCCCCATCCGCA GGCTGGGGTGGAAGTGAGTGCTTGGTCACCCCCCATCCGCA < 41bp 0.883414561271062 0.63420706355005 0.4064194 0.17747605 prediction 0.498414995442024 Functional Loss - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51708433 chr3:51708435 nonsynonymous SNV 0.855 4 23 hm5C_associated_SNPs_65545 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:51708403-51708452
64251 chr11 134131182 134131182 1 + G T UCEC 134131180 + 134131160 134131200 41 CCCCTCTAGCTTCCTGCTCCCTGGGGGCTGCCCACGCCTCT CCCCTCTAGCTTCCTGCTCCCTTGGGGCTGCCCACGCCTCT < 41bp 0.895926506743831 0.64672130539196 0.40036622 0.06960523 prediction 0.498410402703743 Functional Loss - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134131180 chr11:134131182 synonymous SNV . 0 23 hm5C_associated_SNPs_65548 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:134131144-134131209
64251 chr2 112686742 112686742 1 + C T rs150870104 112686740 + 112686720 112686760 41 GCCAAGCCTTACCCGCTATTCCCGGGACCTTTTCCAGGGAG GCCAAGCCTTACCCGCTATTCCTGGGACCTTTTCCAGGGAG < 41bp 0.772038263524273 0.522845250041828 0.39921746 0.35159504 prediction 0.49838602696489 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112686740 chr2:112686742 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_65551 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:112686735-112686760
64251 chr19 57802506 57802506 1 + A C LUSC 57802505 + 57802485 57802525 41 TGTGAAGCCCTATGATTGCCCAGAATGTGGGAAAGCCTTCG TGTGAAGCCCTATGATTGCCCCGAATGTGGGAAAGCCTTCG < 41bp 0.771083801931612 0.521896661411598 0.12841654 0.035152942 prediction 0.498374281040028 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802505 chr19:57802506 synonymous SNV . 0 22 hm5C_associated_SNPs_65553 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57802418-57802692
64251 chrX 75397801 75397801 1 + G T LIHC 75397798 + 75397778 75397818 41 TCAATTGAGACTACAAGTACCACGGTGCTACTTGCACAGAC TCAATTGAGACTACAAGTACCACTGTGCTACTTGCACAGAC < 41bp 0.904681397601165 0.6555168100514 0.18916982 0.022685707 prediction 0.498329175099529 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397798 chrX:75397801 synonymous SNV . 0 24 hm5C_associated_SNPs_65560 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:75397787-75397812
64251 chr6 33258148 33258148 1 + G T TGCT 33258145 + 33258125 33258165 41 CCAACGTGGTCTTTAAACTTCTGGGTCCGGTGCTAGTCAAA CCAACGTGGTCTTTAAACTTCTGTGTCCGGTGCTAGTCAAA < 41bp 0.88017708067426 0.631017066612908 0.40504253 0.12579775 prediction 0.498320028122704 Functional Loss - PFDN6 ENSG00000204220 CDS Human protein_coding chr6:33258145 chr6:33258148 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_65563 0 0 20 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:33258133-33258154
64251 chr17 7158042 7158042 1 + T C BRCA 7158041 + 7158021 7158061 41 TCACCATTGCTCTCGATTCACTCAGCTGGCTGCTACTTCGC TCACCATTGCTCTCGATTCACCCAGCTGGCTGCTACTTCGC < 41bp 0.784839351290317 0.535679401483452 0.097617894 0.045051247 prediction 0.498319899613729 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7158041 chr17:7158042 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_65564 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:7157993-7158069
64251 chr9 130197442 130197442 1 + G A rs192043906 130197439 + 130197419 130197459 41 GAGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAGGAGG GAGGTGCCTCGTGTCTACTCCACAGGACAGGTTCAAGGAGG < 41bp 0.754512637765234 0.505357014164347 0.546829 0.235796 prediction 0.498311247201773 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130197439 chr9:130197442 nonsynonymous SNV 0.009 1 24 hm5C_associated_SNPs_65566 0 0 1 PPIG POSTAR2 ENCODE chr9:130197427-130197493
64251 chr3 44666593 44666593 1 + G C rs535412882 44666589 + 44666569 44666609 41 GTCATCTCCTAGCGGCCTGGCGCCGAGGCGGCGGTACGCAA GTCATCTCCTAGCGGCCTGGCGCCCAGGCGGCGGTACGCAA < 41bp 0.749139273930756 0.494168533523459 0.4109417 0.05725041 prediction 0.498278547861513 Functional Loss - ZNF197 ENSG00000236869 ncRNA_intronic Human antisense chr3:44666589 chr3:44666593 . . 0 25 hm5C_associated_SNPs_65575 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:44666583-44666606
64251 chr11 70049737 70049737 1 + G T LUAD 70049734 + 70049714 70049754 41 TGGAGCAGAACGACCTGGAGCCCGGGCACACCGAGCTCCTG TGGAGCAGAACGACCTGGAGCCCTGGCACACCGAGCTCCTG < 41bp 0.749131567155063 0.359437735614536 0.70330083 0.23318452 prediction 0.498263134310126 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049734 chr11:70049737 nonsynonymous SNV 0.265 4 24 hm5C_associated_SNPs_65578 0 0 1 RBM15 POSTAR2 ENCODE chr11:70049704-70049760
64251 chr5 148730727 148730727 1 + G T OV 148730724 + 148730704 148730744 41 ACTCATCTGTCATGTGCCAGCTGGTGTTGGGGTGCAGCCTG ACTCATCTGTCATGTGCCAGCTGTTGTTGGGGTGCAGCCTG < 41bp 0.900864531139336 0.651737930237028 0.37422436 0.19099385 prediction 0.498253201804617 Functional Loss - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148730724 chr5:148730727 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_65579 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:148730633-148730787
64251 chr17 76198810 76198810 1 + G A rs143041961 76198807 + 76198787 76198827 41 TGCCTTTCTTCCTGTTCTTTCACGGAGGATACTGGCAGAGC TGCCTTTCTTCCTGTTCTTTCACAGAGGATACTGGCAGAGC < 41bp 0.749124786339254 0.497783356551288 0.55612487 0.19285196 prediction 0.498249572678508 Functional Loss - AFMID ENSG00000183077 CDS Human protein_coding chr17:76198807 chr17:76198810 nonsynonymous SNV 0.557 4 24 hm5C_associated_SNPs_65580 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:76198785-76198823
64251 chr9 38397186 38397186 1 + C T PRAD 38397184 + 38397164 38397204 41 CAACATCGTCACCTGCCACACGCCATTTGGAGGGTTTAAGG CAACATCGTCACCTGCCACACGTCATTTGGAGGGTTTAAGG < 41bp 0.796854259402496 0.547734359627242 0.07211718 0.039592415 prediction 0.498239799550509 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38397184 chr9:38397186 nonsynonymous SNV 0.721 4 23 hm5C_associated_SNPs_65582 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:38397180-38397240
64251 chr16 28836700 28836700 1 + G T COAD 28836698 + 28836678 28836718 41 CTTTTATAGGGGACAGAGCACAGGAAAGGGACCCCCACAGT CTTTTATAGGGGACAGAGCACATGAAAGGGACCCCCACAGT < 41bp 0.873310025992477 0.624192752203326 0.34968057 0.16579023 prediction 0.498234547578302 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28836698 chr16:28836700 stopgain 0.998 1 23 hm5C_associated_SNPs_65583 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:28836673-28836704
64251 chr4 170625197 170625197 1 + G C PRAD 170625193 + 170625173 170625213 41 AGCATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGGAT AGCATGGCCATTGGAGCGATCGCACGAAGGATTGTGGGGAT < 41bp 0.749086099924746 0.471709472220388 0.90604615 0.31599903 prediction 0.498172199849492 Functional Loss - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170625193 chr4:170625197 nonsynonymous SNV 0.557 5 25 hm5C_associated_SNPs_65596 0 0 11 LIN28A POSTAR2 GSE39873,GSM980593 chr4:170625180-170625200
64251 chr17 34913103 34913103 1 + A C COAD 34913102 + 34913082 34913122 41 GAACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTGTAAC GAACCCCTAACAGTAGGGCCCCAGGGAGTCCTGTCTGTAAC < 41bp 0.749078773833085 0.491497704150631 0.81624234 0.552967 prediction 0.498157547666169 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34913102 chr17:34913103 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_65598 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:34913086-34913121
64251 chr17 34913105 34913105 1 + G T STAD 34913102 + 34913082 34913122 41 GAACCCCTAACAGTAGGGCCCAAGGGAGTCCTGTCTGTAAC GAACCCCTAACAGTAGGGCCCAATGGAGTCCTGTCTGTAAC < 41bp 0.749078773833085 0.356314849707761 0.81624234 0.102273345 prediction 0.498157547666169 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34913102 chr17:34913105 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_65599 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:34913086-34913121
64251 chr16 67574376 67574376 1 + C T UCEC 67574374 + 67574354 67574394 41 AACTCAGGGCTGGCTGGCTTCGCCAGGCTGTGTGTAGGCGA AACTCAGGGCTGGCTGGCTTCGTCAGGCTGTGTGTAGGCGA < 41bp 0.80856474158067 0.559497784904426 0.587411 0.23184216 prediction 0.498133913352488 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67574374 chr16:67574376 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65600 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr16:67574362-67574383
64251 chr20 42090712 42090712 1 + A C rs78975528 42090711 + 42090691 42090731 41 GTTTAACAGGCACTTAATCTCAGTAAAGTCAGTTGCCAGTT GTTTAACAGGCACTTAATCTCCGTAAAGTCAGTTGCCAGTT < 41bp 0.756104625018876 0.507068041321096 0.84622324 0.35286173 prediction 0.498073167395559 Functional Loss - SRSF6 ENSG00000124193 UTR3 Human protein_coding chr20:42090711 chr20:42090712 . . 0 22 hm5C_associated_SNPs_65606 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714641 chr20:42090543-42090758
64251 chr15 39881542 39881542 1 + C T rs571287917 39881540 + 39881520 39881560 41 GGCCAGGGTGTCGAACATGCCACGGCCAACAAACAGGTACA GGCCAGGGTGTCGAACATGCCATGGCCAACAAACAGGTACA < 41bp 0.749028074213164 0.490171131725818 0.17973465 0.12025002 prediction 0.498056148426329 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39881540 chr15:39881542 nonsynonymous SNV 0.761 0 23 hm5C_associated_SNPs_65608 0 0 1 SND1 POSTAR2 ENCODE chr15:39881445-39881554
64251 chr17 27014391 27014391 1 + G C LUSC 27014390 + 27014370 27014410 41 ATCAACCGAGTCAATGAGGTCGGGGTCGATGTCAACCGTGC ATCAACCGAGTCAATGAGGTCCGGGTCGATGTCAACCGTGC < 41bp 0.749024918626612 0.438326337490763 0.9114704 0.32122508 prediction 0.498049837253225 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014390 chr17:27014391 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_65609 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr17:27014326-27014405
64251 chr1 160318809 160318809 1 + G T UCEC 160318807 + 160318787 160318827 41 AGCTTCAATTAGTGGAGACACAGGGGTTATCCACGTAGTAG AGCTTCAATTAGTGGAGACACATGGGTTATCCACGTAGTAG < 41bp 0.883688130687833 0.63467906485781 0.89056313 0.28549165 prediction 0.498018131660046 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160318807 chr1:160318809 nonsynonymous SNV 0.979 4 23 hm5C_associated_SNPs_65612 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:160318808-160318846
64251 chr7 66413544 66413544 1 + C T UCEC 66413542 + 66413522 66413562 41 CTTTCATAGGCAGGGAAGCCCACGAGGAGATAAACATCACC CTTTCATAGGCAGGGAAGCCCATGAGGAGATAAACATCACC < 41bp 0.820692772502656 0.571696980957087 0.87047756 0.51558506 prediction 0.497991583091138 Functional Loss - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66413542 chr7:66413544 synonymous SNV . 0 23 hm5C_associated_SNPs_65615 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:66413540-66413560
64251 chrX 155127890 155127890 1 + T C STAD 155127889 + 155127869 155127909 41 TATGCCATGAATAGCGAGTTCTCAAGTGTCTTAGCTGCACA TATGCCATGAATAGCGAGTTCCCAAGTGTCTTAGCTGCACA < 41bp 0.748993652664956 0.495197323675789 0.73145115 0.044540137 prediction 0.497987305329913 Functional Loss - VAMP7 ENSG00000124333 CDS Human protein_coding chrX:155127889 chrX:155127890 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_65616 0 0 1 YBX3 POSTAR2 ENCODE chrX:155127861-155127913
64251 chr17 48797148 48797148 1 + G T SARC 48797145 + 48797125 48797165 41 TAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGC TAATGGGCCGGGACCGAAACCTATCCCCGGACGAGAAGCGC < 41bp 0.748979893600019 0.376239107427461 0.24990305 0.24257728 prediction 0.497959787200037 Functional Loss - LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48797145 chr17:48797148 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_65623 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:48797080-48797183
64251 chrX 51637403 51637403 1 + G T UCEC 51637400 + 51637380 51637420 41 CTTGCCAGAGGGACAGGAGCCATGGCTCAGAAAATGGACTG CTTGCCAGAGGGACAGGAGCCATTGCTCAGAAAATGGACTG < 41bp 0.7489687887612 0.492079192838381 0.2698211 0.52507937 prediction 0.497937577522399 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637400 chrX:51637403 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_65624 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:51637400-51637420
64251 chr2 233527596 233527596 1 + G T BLCA 233527594 + 233527574 233527614 41 TGGGGGCCCCCCAGACCCACCTGGGCCTGAAGAGCATGATC TGGGGGCCCCCCAGACCCACCTTGGCCTGAAGAGCATGATC < 41bp 0.748957609974483 0.392943032698866 0.5173594 0.12292224 prediction 0.497915219948966 Functional Loss - EFHD1 ENSG00000115468 CDS Human protein_coding chr2:233527594 chr2:233527596 synonymous SNV . 0 23 hm5C_associated_SNPs_65628 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:233527564-233527605
64251 chr9 4662753 4662753 1 + G C THCA 4662749 + 4662729 4662769 41 GGTGTGCGCGGGAGAGAGCTCGTCGTGGGGCAGCGTGCGAC GGTGTGCGCGGGAGAGAGCTCGTCCTGGGGCAGCGTGCGAC < 41bp 0.816490381191725 0.567533913721194 0.50177914 0.16988593 prediction 0.497912934941062 Functional Loss - PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4662749 chr9:4662753 synonymous SNV . 0 25 hm5C_associated_SNPs_65629 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:4662732-4662761
64251 chr20 23345844 23345844 1 + A C rs6048760 23345843 + 23345823 23345863 41 GGGTGGGCACGGAGATGGAGCAGGTTTCCAAAAATGAGGGT GGGTGGGCACGGAGATGGAGCCGGTTTCCAAAAATGAGGGT < 41bp 0.748943493014711 0.495108921413757 0.36859918 0.21927214 prediction 0.497886986029423 Functional Loss - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345843 chr20:23345844 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_65630 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:23345825-23345858
64251 chr1 179063289 179063289 1 + C T BLCA 179063287 + 179063267 179063307 41 GTTGCTCAAGGCTGGATGGTCCCGGGAAGAAATTACGATGG GTTGCTCAAGGCTGGATGGTCCTGGGAAGAAATTACGATGG < 41bp 0.790186883585944 0.541252174779805 0.43342146 0.4903397 prediction 0.497869417612277 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179063287 chr1:179063289 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_65634 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:179063270-179063290
64251 chr15 91496242 91496242 1 + C T rs8041035 91496240 + 91496220 91496260 41 GAGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTAACTT GAGATGATCCGCCGGGCAGCCATGGAGTGCATGTGTAACTT < 41bp 0.748930499201917 0.475669123118288 0.35946837 0.28753126 prediction 0.497860998403833 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496240 chr15:91496242 nonsynonymous SNV 0.946 4 23 hm5C_associated_SNPs_65636 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:91496240-91496260
64251 chr17 61908549 61908549 1 + A C STAD 61908545 + 61908525 61908565 41 AGCGCACGATGCTGGAGTTGCTCAACCAGCTCGACGGCTTT AGCGCACGATGCTGGAGTTGCTCACCCAGCTCGACGGCTTT < 41bp 0.748929734081438 0.315911897160713 0.61079943 0.08101624 prediction 0.497859468162877 Functional Loss - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908545 chr17:61908549 nonsynonymous SNV 0.997 5 25 hm5C_associated_SNPs_65637 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:61908527-61908556
64251 chr17 79079945 79079945 1 + A T ESCA 79079941 + 79079921 79079961 41 GATGGCAGTGACAGGCTGCACATGAGGTGAGCTCTGGGCCC GATGGCAGTGACAGGCTGCACATGTGGTGAGCTCTGGGCCC < 41bp 0.841471473170163 0.592547572429494 0.7023301 0.47085395 prediction 0.497847801481339 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79079941 chr17:79079945 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_65640 0 0 3 DDX55 POSTAR2 ENCODE chr17:79079907-79079953
64251 chr10 60029056 60029056 1 + G T SARC 60029054 + 60029034 60029074 41 ATGAGTCTGACTTCCAGTTCCAGCGTACGAGGTGAAGTGGG ATGAGTCTGACTTCCAGTTCCATCGTACGAGGTGAAGTGGG < 41bp 0.876422355743662 0.627498639202009 0.51580215 0.099702805 prediction 0.497847433083305 Functional Loss - CISD1 ENSG00000122873 CDS Human protein_coding chr10:60029054 chr10:60029056 nonsynonymous SNV 0.521 0 23 hm5C_associated_SNPs_65641 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:60029000-60029062
64251 chr17 78079630 78079630 1 + G T SARC 78079628 + 78079608 78079648 41 CGGGCACCGTCCCCACTCTACAGCGTGGAGTTCTCCGAGGA CGGGCACCGTCCCCACTCTACATCGTGGAGTTCTCCGAGGA < 41bp 0.74891125432659 0.395066020410636 0.15756005 0.08369514 prediction 0.497822508653179 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78079628 chr17:78079630 nonsynonymous SNV 0.951 1 23 hm5C_associated_SNPs_65642 0 0 2 PCBP2 POSTAR2 ENCODE chr17:78079546-78079642
64251 chr9 131671269 131671269 1 + C T BLCA 131671267 + 131671247 131671287 41 GACCTGGAGCGCATCCCCCACTCCATCTTCAGCCTCCACAA GACCTGGAGCGCATCCCCCACTTCATCTTCAGCCTCCACAA < 41bp 0.748907208879556 0.458680337159423 0.94207305 0.04305756 prediction 0.497814417759111 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671267 chr9:131671269 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65645 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:131671257-131671290
64251 chr12 94543591 94543591 1 + G C CESC 94543590 + 94543570 94543610 41 TTCCAGGGCCAGGCATCCCTCGACTGCGGCCACGGCCACCC TTCCAGGGCCAGGCATCCCTCCACTGCGGCCACGGCCACCC < 41bp 0.748897417461286 0.442002924732469 0.55809367 0.29381222 prediction 0.497794834922571 Functional Loss - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94543590 chr12:94543591 nonsynonymous SNV 0.966 0 22 hm5C_associated_SNPs_65647 0 0 1 EIF3H POSTAR2 ENCODE chr12:94543574-94543634
64251 chr11 33566806 33566806 1 + A C rs183458242 33566802 + 33566782 33566822 41 AGTGAAGGCCACCCGGTTGCCACCATTGCGAGCAGAAAACA AGTGAAGGCCACCCGGTTGCCACCCTTGCGAGCAGAAAACA < 41bp 0.748876433693487 0.317156925805631 0.10204193 0.014218181 prediction 0.497752867386975 Functional Loss - KIAA1549L ENSG00000110427 CDS Human protein_coding chr11:33566802 chr11:33566806 synonymous SNV . 0 25 hm5C_associated_SNPs_65653 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:33566785-33566816
64251 chr19 39873916 39873916 1 + G T UCEC 39873914 + 39873894 39873934 41 GTCTCTGTGTCTGAGCATGACAGAACACGCCTTGGGTGGTG GTCTCTGTGTCTGAGCATGACATAACACGCCTTGGGTGGTG < 41bp 0.748876126311591 0.415673077318399 0.28753662 0.0859223 prediction 0.497752252623182 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39873914 chr19:39873916 stopgain 1.000 1 23 hm5C_associated_SNPs_65654 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39873860-39873939
64251 chr12 48172892 48172892 1 + G T SARC 48172890 + 48172870 48172910 41 ACCTGGCTCAAGGGGCTGCGCGGCTTCTTCTTCGTGGGCGT ACCTGGCTCAAGGGGCTGCGCGTCTTCTTCTTCGTGGGCGT < 41bp 0.74886191465498 0.397086820250157 0.11180714 0.03917533 prediction 0.49772382930996 Functional Loss - SLC48A1 ENSG00000211584 CDS Human protein_coding chr12:48172890 chr12:48172892 nonsynonymous SNV 0.990 0 23 hm5C_associated_SNPs_65658 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:48172880-48172900
64251 chr8 27646479 27646479 1 + A T ACC 27646475 + 27646455 27646495 41 TACAGCATCACCACAGGTTTCTGGAAGGAATCAAATATGTG TACAGCATCACCACAGGTTTCTGGTAGGAATCAAATATGTG < 41bp 0.748859237365364 0.412385472904263 0.1644361 0.08758685 prediction 0.497718474730728 Functional Loss - ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27646475 chr8:27646479 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_65659 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:27646414-27646483
64251 chr2 219602936 219602936 1 + A C LUSC 219602935 + 219602915 219602955 41 GCCCATGGCCTCCTCATCCACAGAACCATACCTCTGCTTGG GCCCATGGCCTCCTCATCCACCGAACCATACCTCTGCTTGG < 41bp 0.7809425265281 0.532089771754376 0.38405532 0.12468079 prediction 0.497705509547449 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219602935 chr2:219602936 synonymous SNV . 0 22 hm5C_associated_SNPs_65660 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:219602920-219602940
64251 chrX 56591882 56591882 1 + G T LUAD 56591880 + 56591860 56591900 41 CACTGGCCCTGCAGCCCCCCCTGGCTCCACCGGCTCTGGTG CACTGGCCCTGCAGCCCCCCCTTGCTCCACCGGCTCTGGTG < 41bp 0.748848013650027 0.403805871875491 0.2752754 0.030258238 prediction 0.497696027300055 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591880 chrX:56591882 nonsynonymous SNV 0.951 3 23 hm5C_associated_SNPs_65661 0 0 4 RBM15 POSTAR2 ENCODE chrX:56591824-56591922
64251 chr19 4251073 4251073 1 + C T UCEC 4251071 + 4251051 4251091 41 CAAGGGGAAGAAATTCAATGCTCGGAAGGAGACGGTGCAGA CAAGGGGAAGAAATTCAATGCTTGGAAGGAGACGGTGCAGA < 41bp 0.748833473999807 0.485568026489476 0.42886016 0.43966943 prediction 0.497666947999615 Functional Loss - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4251071 chr19:4251073 nonsynonymous SNV 0.407 4 23 hm5C_associated_SNPs_65667 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:4251066-4251100
64251 chr12 132281732 132281732 1 + C T UCEC 132281730 + 132281710 132281750 41 TCTTGCCTTTCAGAAGTCCCCACGAGAAGAAGAAGAAGAGG TCTTGCCTTTCAGAAGTCCCCATGAGAAGAAGAAGAAGAGG < 41bp 0.767657443982315 0.518828463050836 0.27299434 0.12144184 prediction 0.497657961862958 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281730 chr12:132281732 synonymous SNV . 0 23 hm5C_associated_SNPs_65668 0 0 1 BUD13 POSTAR2 ENCODE chr12:132281713-132281784
64251 chrX 69640065 69640065 1 + A C LUAD 69640061 + 69640041 69640081 41 AAAAAGAAACGGGCTCTGGCCAGCAACACCAGCTTCTTCTC AAAAAGAAACGGGCTCTGGCCAGCCACACCAGCTTCTTCTC < 41bp 0.748821019821799 0.337249611295933 0.3997336 0.6827112 prediction 0.497642039643599 Functional Loss - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69640061 chrX:69640065 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_65670 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:69640044-69640082
64251 chr11 47256871 47256871 1 + G C BLCA 47256870 + 47256850 47256890 41 CTGACCACGGACCAGAAGAGCGAGATCCGAGTTTACTCTGC CTGACCACGGACCAGAAGAGCCAGATCCGAGTTTACTCTGC < 41bp 0.748811510038671 0.471399216780277 0.8864377 0.66839415 prediction 0.497623020077343 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256870 chr11:47256871 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_65672 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:47256854-47256890
64251 chrX 47040923 47040923 1 + G T LUAD 47040920 + 47040900 47040940 41 TTACAGGTCCCGAGGCCTCCCTAGAGCCTGGGGCCGACTCT TTACAGGTCCCGAGGCCTCCCTATAGCCTGGGGCCGACTCT < 41bp 0.915504997003207 0.666698351970663 0.033309817 0.020144552 prediction 0.497613290065088 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47040920 chrX:47040923 stopgain 0.988 0 24 hm5C_associated_SNPs_65673 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47040923-47040967
64251 chr5 36985422 36985422 1 + C T SKCM 36985420 + 36985400 36985440 41 GGGTGAAAGCCGGCCTGAGACTCCAAAACAAAAGAGTGATG GGGTGAAAGCCGGCCTGAGACTTCAAAACAAAAGAGTGATG < 41bp 0.748803386590671 0.494701846653131 0.93646836 0.24487585 prediction 0.497606773181342 Functional Loss - NIPBL ENSG00000164190 CDS Human protein_coding chr5:36985420 chr5:36985422 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_65675 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr5:36985394-36985424
64251 chr2 27887135 27887135 1 + G T BLCA 27887133 + 27887113 27887153 41 CCCCCTACAGCTTAGAGACCCTGAAGGGCGGCACTATCCTT CCCCCTACAGCTTAGAGACCCTTAAGGGCGGCACTATCCTT < 41bp 0.748800313057267 0.400800891550262 0.10646415 0.08000302 prediction 0.497600626114534 Functional Loss - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27887133 chr2:27887135 synonymous SNV . 0 23 hm5C_associated_SNPs_65676 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:27887120-27887140
64251 chr9 139887630 139887630 1 + C T SKCM 139887628 + 139887608 139887648 41 GTACCAGGCCCAGAGGCAGCCCCCAGGCTGCGGGCGCTGAC GTACCAGGCCCAGAGGCAGCCCTCAGGCTGCGGGCGCTGAC < 41bp 0.79512441377039 0.54633217239293 0.43333375 0.2157278 prediction 0.49758448275492 Functional Loss - C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887628 chr9:139887630 nonsynonymous SNV 0.594 0 23 hm5C_associated_SNPs_65677 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:139887612-139887648
64251 chr3 9969872 9969872 1 + C T SKCM 9969870 + 9969850 9969890 41 GTGTGGCCTCTGGAACCTGACTCCGTTAGGACGAACATCTG GTGTGGCCTCTGGAACCTGACTTCGTTAGGACGAACATCTG < 41bp 0.748789283887733 0.491045310939074 0.18113539 0.06257188 prediction 0.497578567775467 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9969870 chr3:9969872 nonsynonymous SNV 0.070 3 23 hm5C_associated_SNPs_65678 0 0 4 DDX24 POSTAR2 ENCODE chr3:9969848-9969905
64251 chr12 3000150 3000150 1 + G C BLCA 3000146 + 3000126 3000166 41 CGCTGCCGGCTCAGTCCCAGCGGCGACAGGTCAGACAGGGC CGCTGCCGGCTCAGTCCCAGCGGCCACAGGTCAGACAGGGC < 41bp 0.74878336121285 0.457474833999883 0.4077593 0.28735307 prediction 0.4975667224257 Functional Loss - TULP3 ENSG00000078246 CDS Human protein_coding chr12:3000146 chr12:3000150 nonsynonymous SNV 0.959 3 25 hm5C_associated_SNPs_65679 0 0 1 PRPF8 POSTAR2 ENCODE chr12:3000149-3000205
64251 chr1 33291713 33291713 1 + C T COAD 33291711 + 33291691 33291731 41 TTCTCCAGAAATGATGTGCTCACGGGTGCCCTCTGAACAGT TTCTCCAGAAATGATGTGCTCATGGGTGCCCTCTGAACAGT < 41bp 0.784915717325425 0.536136312247585 0.631272 0.61026573 prediction 0.497558810155678 Functional Loss - S100PBP ENSG00000116497 CDS Human protein_coding chr1:33291711 chr1:33291713 nonsynonymous SNV 0.688 1 23 hm5C_associated_SNPs_65681 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:33291711-33291739
64251 chr1 171763591 171763591 1 + G T OV 171763589 + 171763569 171763609 41 TTGACAGTAAGGACCCAACACTGGGAATGAGTTGTCCGCCC TTGACAGTAAGGACCCAACACTTGGAATGAGTTGTCCGCCC < 41bp 0.877187686164085 0.628416634043617 0.084429085 0.020331383 prediction 0.497542104240936 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763589 chr1:171763591 synonymous SNV . 0 23 hm5C_associated_SNPs_65685 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:171763561-171763597
64251 chr9 101594134 101594134 1 + C T SKCM 101594132 + 101594112 101594152 41 ACCTTCGAATACCTGGGGAACTCCGGGGAGCCCCAGATCGG ACCTTCGAATACCTGGGGAACTTCGGGGAGCCCCAGATCGG < 41bp 0.80480027412723 0.556036181503585 0.34657913 0.5778092 prediction 0.497528185247291 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101594132 chr9:101594134 nonsynonymous SNV 0.057 1 23 hm5C_associated_SNPs_65688 0 0 1 DDX24 POSTAR2 ENCODE chr9:101594118-101594152
64251 chr17 80544015 80544015 1 + A T rs188729988 80544011 + 80543991 80544031 41 TGGACAAGCTGTGGTCACCCCGGCAGCCGTGCTGGCCCCTC TGGACAAGCTGTGGTCACCCCGGCTGCCGTGCTGGCCCCTC < 41bp 0.877793766894785 0.629041356144805 0.88688976 0.86106694 prediction 0.49750482149996 Functional Loss - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544011 chr17:80544015 synonymous SNV . 0 25 hm5C_associated_SNPs_65694 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80543975-80544024
64251 chr2 187370550 187370550 1 + G T UCEC 187370547 + 187370527 187370567 41 GCAGATGATACCCGCTACACCCAGGGAACAGGTGGTGATGA GCAGATGATACCCGCTACACCCATGGAACAGGTGGTGATGA < 41bp 0.748749329834007 0.355032219148342 0.8892602 0.22873133 prediction 0.497498659668015 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370547 chr2:187370550 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_65695 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:187370453-187370568
64251 chr3 157841731 157841731 1 + G T LUAD 157841728 + 157841708 157841748 41 GTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCTATAGAGTT GTCGAAGTCGTTCAAGGGGTCGATGGAAATCCTATAGAGTT < 41bp 0.748744691209989 0.390591230843677 0.8388019 0.13970348 prediction 0.497489382419978 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157841728 chr3:157841731 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65698 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:157841697-157841734
64251 chr2 160604591 160604591 1 + C T UCEC 160604589 + 160604569 160604609 41 TTCAGAAAGGGTTGTTTCATCTCAAAGACCATTTCAAGAAT TTCAGAAAGGGTTGTTTCATCTTAAAGACCATTTCAAGAAT < 41bp 0.832624837805172 0.583882662357861 0.39332822 0.094401985 prediction 0.497484350894622 Functional Loss - MARCH7 ENSG00000136536 CDS Human protein_coding chr2:160604589 chr2:160604591 stopgain 1.000 0 23 hm5C_associated_SNPs_65699 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:160604560-160604600
64251 chr6 35378951 35378951 1 + C T BLCA 35378949 + 35378929 35378969 41 AGGCAGAAGGAGCCCCAGAGCTCAATGGGGGACCACAGCAT AGGCAGAAGGAGCCCCAGAGCTTAATGGGGGACCACAGCAT < 41bp 0.809402184052309 0.560660094549992 0.42738423 0.12524596 prediction 0.497484179004634 Functional Loss - PPARD ENSG00000112033 CDS Human protein_coding chr6:35378949 chr6:35378951 synonymous SNV . 0 23 hm5C_associated_SNPs_65700 0 0 1 UCHL5 POSTAR2 ENCODE chr6:35378888-35378966
64251 chr11 125497532 125497532 1 + A C KIRP 125497528 + 125497508 125497548 41 ACTTGCTGTGAATAGAGTAACTGAAGAAGCAGTCGCAGTGA ACTTGCTGTGAATAGAGTAACTGACGAAGCAGTCGCAGTGA < 41bp 0.748739244212337 0.340186119705883 0.20281032 0.13905367 prediction 0.497478488424673 Functional Loss - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125497528 chr11:125497532 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_65701 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125497503-125497584
64251 chr7 65553865 65553865 1 + T C UCEC 65553864 + 65553844 65553884 41 GCCGAGGACCTCATCCTCTACTGCACCAAGGAATTCAGCTT GCCGAGGACCTCATCCTCTACCGCACCAAGGAATTCAGCTT < 41bp 0.748735389420945 0.489342570365338 0.13502702 0.13213971 prediction 0.49747077884189 Functional Loss - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65553864 chr7:65553865 nonsynonymous SNV 0.979 3 22 hm5C_associated_SNPs_65702 0 0 6 BUD13 POSTAR2 ENCODE chr7:65553799-65553869
64251 chr3 25611395 25611395 1 + G T LUSC 25611392 + 25611372 25611412 41 CTTTCCCTTCACTCTGCCAGCTGGGTAAATACACCACGGTA CTTTCCCTTCACTCTGCCAGCTGTGTAAATACACCACGGTA < 41bp 0.74873339764802 0.364162350577328 0.7665286 0.23154226 prediction 0.49746679529604 Functional Loss - RARB ENSG00000077092 CDS Human protein_coding chr3:25611392 chr3:25611395 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65703 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:25611361-25611399
64251 chr19 12781095 12781095 1 + C T UCEC 12781093 + 12781073 12781113 41 GTGCGCAAATTCCGGGGCCACGCAGGGGTGAGTGAAAGCCT GTGCGCAAATTCCGGGGCCACGTAGGGGTGAGTGAAAGCCT < 41bp 0.748727850337466 0.484761533938632 0.12610966 0.24796715 prediction 0.497455700674932 Functional Loss - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12781093 chr19:12781095 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_65705 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:12781079-12781106
64251 chr14 67787027 67787027 1 + T C KIRP 67787026 + 67787006 67787046 41 AATAGGAAGAGACCTATCATCTTGATTGGTCCACAGAACTG AATAGGAAGAGACCTATCATCCTGATTGGTCCACAGAACTG < 41bp 0.764302792513494 0.515589905443692 0.2388207 0.1541872 prediction 0.497425774139603 Functional Loss - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67787026 chr14:67787027 synonymous SNV . 0 22 hm5C_associated_SNPs_65708 0 0 4 EWSR1 POSTAR2 SRX029344 chr14:67787003-67787029
64251 chr19 37209913 37209913 1 + G T UCEC 37209910 + 37209890 37209930 41 GGAACACCAAGAGAAGTATTCTAGATCAGTTGTAAGCATCA GGAACACCAAGAGAAGTATTCTATATCAGTTGTAAGCATCA < 41bp 0.748700577057026 0.382398737942591 0.17080024 0.16637045 prediction 0.497401154114052 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37209910 chr19:37209913 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_65712 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37209860-37209923
64251 chr13 113813025 113813025 1 + C T PAAD 113813023 + 113813003 113813043 41 GCCTGGTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTCA GCCTGGTCCTGGTCCTCGCCCTTCATCGTGTGGAGCCCTCA < 41bp 0.750547020951252 0.501856626194838 0.9486071 0.13624597 prediction 0.497380789512827 Functional Loss - PROZ ENSG00000126231 CDS Human protein_coding chr13:113813023 chr13:113813025 synonymous SNV . 0 23 hm5C_associated_SNPs_65716 0 0 1 GRWD1 POSTAR2 ENCODE chr13:113813000-113813030
64251 chr19 18305832 18305832 1 + G C BLCA 18305831 + 18305811 18305851 41 TCTTCGTGCCCCCCCAATTTCGAGTCACCTACATCAACGGC TCTTCGTGCCCCCCCAATTTCCAGTCACCTACATCAACGGC < 41bp 0.748683824464132 0.429569593746527 0.07638621 0.008577734 prediction 0.497367648928264 Functional Loss - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18305831 chr19:18305832 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_65718 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:18305820-18305840
64251 chr5 78376548 78376548 1 + G T PAAD 78376545 + 78376525 78376565 41 GCTGCTGCCTGTGACCTCGCCAGGGAAGTGGCTGGCAAAGG GCTGCTGCCTGTGACCTCGCCAGTGAAGTGGCTGGCAAAGG < 41bp 0.748682840255208 0.343724825909979 0.92583233 0.6885706 prediction 0.497365680510416 Functional Loss - BHMT2 ENSG00000132840 CDS Human protein_coding chr5:78376545 chr5:78376548 nonsynonymous SNV 0.766 1 24 hm5C_associated_SNPs_65719 0 0 1 U2AF2 POSTAR2 ENCODE chr5:78376486-78376564
64251 chr1 45793456 45793456 1 + G T SARC 45793454 + 45793434 45793474 41 CAGGGTTTGGGCTTGGGGGACTGAGGCTTACAGCCCTGCAG CAGGGTTTGGGCTTGGGGGACTTAGGCTTACAGCCCTGCAG < 41bp 0.748680554349061 0.401799833413724 0.9054061 0.9093132 prediction 0.497361108698122 Functional Loss - HPDL ENSG00000186603 CDS Human protein_coding chr1:45793454 chr1:45793456 synonymous SNV . 0 23 hm5C_associated_SNPs_65721 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:45793438-45793487
64251 chr11 65823007 65823007 1 + A C LUAD 65823006 + 65822986 65823026 41 AACTTGTTTTCTTTTTTAAGCAGGGAGATCATTCGCTGAAG AACTTGTTTTCTTTTTTAAGCCGGGAGATCATTCGCTGAAG < 41bp 0.748670441372981 0.4895285985923 0.9021462 0.8863303 prediction 0.497340882745962 Functional Loss - SF3B2 ENSG00000087365;ENSG00000087365 exonic;splicing Human other chr11:65823006 chr11:65823007 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_65725 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:65823000-65823020
64251 chr2 61258823 61258823 1 + A C LIHC 61258819 + 61258799 61258839 41 TTCCACCCAGTAGATTTGTTCAGCAAGCTGAAGAAAGCAGC TTCCACCCAGTAGATTTGTTCAGCCAGCTGAAGAAAGCAGC < 41bp 0.74865648883666 0.345983847357663 0.40792966 0.37661567 prediction 0.49731297767332 Functional Loss - PEX13 ENSG00000162928 CDS Human protein_coding chr2:61258819 chr2:61258823 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_65731 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:61258811-61258835
64251 chr5 175793474 175793474 1 + C T UCEC 175793472 + 175793452 175793492 41 CTGGATGGCGCAGGCAAGAGCACGTTCCTGCGCGTGTTGTC CTGGATGGCGCAGGCAAGAGCATGTTCCTGCGCGTGTTGTC < 41bp 0.786839244724096 0.538210149063278 0.44010687 0.43830603 prediction 0.497258191321634 Functional Loss - ARL10 ENSG00000175414 CDS Human protein_coding chr5:175793472 chr5:175793474 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_65738 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:175793474-175793475
64251 chr9 127101926 127101926 1 + G T LIHC 127101924 + 127101904 127101944 41 TCAAGTCCGACATCTGGTCCCTGGGCTGTCTGCTGTACGAG TCAAGTCCGACATCTGGTCCCTTGGCTGTCTGCTGTACGAG < 41bp 0.74861928156002 0.399791591822613 0.40210298 0.06193444 prediction 0.497238563120041 Functional Loss - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127101924 chr9:127101926 synonymous SNV . 0 23 hm5C_associated_SNPs_65741 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:127101920-127101940
64251 chr1 155278658 155278658 1 + G T rs140698672 155278656 + 155278636 155278676 41 CGCCCTTAGTGTGGGGAGAGCGGGAACTACTCGACCCACAG CGCCCTTAGTGTGGGGAGAGCGTGAACTACTCGACCCACAG < 41bp 0.797523822497737 0.54891303345514 0.92152745 0.34844977 prediction 0.497221578085193 Functional Loss - FDPS ENSG00000160752 UTR5 Human protein_coding chr1:155278656 chr1:155278658 . . 0 23 hm5C_associated_SNPs_65747 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:155278640-155278740
64251 chr5 36153144 36153144 1 + G T STAD 36153142 + 36153122 36153162 41 GCTAAATCGAGAGAACTTTCCAGGTAAGGACATGAGGGTAA GCTAAATCGAGAGAACTTTCCATGTAAGGACATGAGGGTAA < 41bp 0.748608678884904 0.41159862276597 0.709384 0.4152628 prediction 0.497217357769808 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36153142 chr5:36153144 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_65749 0 0 2 PRPF8 POSTAR2 ENCODE chr5:36153100-36153189
64251 chr7 100731112 100731112 1 + C T rs145410552 100731110 + 100731090 100731130 41 CGGCCCAGTGTCCCCAGCACCCCGGGGAGGCACTGCGCTTC CGGCCCAGTGTCCCCAGCACCCTGGGGAGGCACTGCGCTTC < 41bp 0.748603008561334 0.495545593066873 0.8672881 0.8595932 prediction 0.497206017122669 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731110 chr7:100731112 synonymous SNV . 0 23 hm5C_associated_SNPs_65751 0 0 3 EIF3H POSTAR2 ENCODE chr7:100731049-100731123
64251 chr12 17142053 17142053 1 + G T PAAD 17142051 + 17142031 17142071 41 GGCCGGCCGTCTCCTTAACACAGAACACCATGCCTTCAATT GGCCGGCCGTCTCCTTAACACATAACACCATGCCTTCAATT < 41bp 0.748571985221211 0.413390718888716 0.06053853 0.018510371 prediction 0.497143970442422 Functional Loss - SKP1P2 ENSG00000256211 upstream Human processed_pseudogene chr12:17142051 chr12:17142053 . . 0 23 hm5C_associated_SNPs_65756 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:17142040-17142060
64251 chr13 47315857 47315857 1 + C T CESC 47315855 + 47315835 47315875 41 CTGTTGACACTCTGCTGGCACTCGGGGAGAAAGCCCCACCA CTGTTGACACTCTGCTGGCACTTGGGGAGAAAGCCCCACCA < 41bp 0.748571086998734 0.477646703560038 0.6053774 0.8633458 prediction 0.497142173997468 Functional Loss - LRCH1 ENSG00000136141 CDS Human protein_coding chr13:47315855 chr13:47315857 synonymous SNV . 0 23 hm5C_associated_SNPs_65757 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr13:47315830-47315858
64251 chr13 47315858 47315858 1 + G T THCA 47315855 + 47315835 47315875 41 CTGTTGACACTCTGCTGGCACTCGGGGAGAAAGCCCCACCA CTGTTGACACTCTGCTGGCACTCTGGGAGAAAGCCCCACCA < 41bp 0.748571086998734 0.370540091381527 0.6053774 0.22780061 prediction 0.497142173997468 Functional Loss - LRCH1 ENSG00000136141 CDS Human protein_coding chr13:47315855 chr13:47315858 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65758 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr13:47315830-47315858
64251 chr20 62895850 62895850 1 + G T SARC 62895847 + 62895827 62895867 41 TAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACA TAGAGTATGCAAAGCAGAAACTGTACTTCTTCATCAGAACA < 41bp 0.748549869179085 0.407820039654954 0.7965071 0.2632537 prediction 0.49709973835817 Functional Loss - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62895847 chr20:62895850 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_65763 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62895843-62895869
64251 chr5 37396597 37396597 1 + C T SKCM 37396595 + 37396575 37396615 41 ATTTTATGGAGGAAGATATCCTCGGTCCTTTACCTCCACCT ATTTTATGGAGGAAGATATCCTTGGTCCTTTACCTCCACCT < 41bp 0.748549689371725 0.477513028499851 0.765738 0.31164527 prediction 0.49709937874345 Functional Loss - WDR70 ENSG00000082068 CDS Human protein_coding chr5:37396595 chr5:37396597 synonymous SNV . 0 23 hm5C_associated_SNPs_65764 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:37396580-37396600
64251 chr1 93602335 93602335 1 + G T LUSC 93602333 + 93602313 93602353 41 CAAGAAGAGCACTCCAGACTCAGAACTCAGAAATTGTAAAA CAAGAAGAGCACTCCAGACTCATAACTCAGAAATTGTAAAA < 41bp 0.748540872247274 0.449018024145961 0.40555224 0.1836896 prediction 0.497081744494548 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93602333 chr1:93602335 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_65766 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:93602285-93602339
64251 chr12 57965167 57965167 1 + G T SKCM 57965164 + 57965144 57965184 41 TCAAGCAGCAAATGCTGGACCAGGAAGAGGTAATAGGAGGG TCAAGCAGCAAATGCTGGACCAGTAAGAGGTAATAGGAGGG < 41bp 0.748539876312519 0.353076016401042 0.8309255 0.38961583 prediction 0.497079752625037 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57965164 chr12:57965167 stopgain 1.000 1 24 hm5C_associated_SNPs_65768 0 0 2 DDX24 POSTAR2 ENCODE chr12:57965156-57965168
64251 chr12 53776035 53776035 1 + C T STAD 53776033 + 53776013 53776053 41 CCTCACAGCCACACAACTTTCACAGGGTGCCAATGGCTGGC CCTCACAGCCACACAACTTTCATAGGGTGCCAATGGCTGGC < 41bp 0.748539278520966 0.477142099222106 0.0150415 0.046426088 prediction 0.497078557041932 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776033 chr12:53776035 stopgain 1.000 1 23 hm5C_associated_SNPs_65770 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:53776010-53776066
64251 chrX 55028760 55028760 1 + G T UCEC 55028758 + 55028738 55028778 41 TGAGTGGCCTGTTTGCCACCCAGAATGGGGATGTTGGTTGC TGAGTGGCCTGTTTGCCACCCATAATGGGGATGTTGGTTGC < 41bp 0.748538692296248 0.404625819318563 0.2040196 0.08084142 prediction 0.497077384592496 Functional Loss - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55028758 chrX:55028760 nonsynonymous SNV 0.793 0 23 hm5C_associated_SNPs_65771 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chrX:55028760-55028780
64251 chr17 41001198 41001198 1 + C T UCEC 41001196 + 41001176 41001216 41 GCTACAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGG GCTACAGCGCCCACAGCTGACTTGGCAGGTCCTGGGAAAGG < 41bp 0.801435944036742 0.552898089360193 0.111665756 0.19169894 prediction 0.497075709353097 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41001196 chr17:41001198 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_65773 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41001131-41001208
64251 chr20 62614414 62614414 1 + C T SKCM 62614412 + 62614392 62614432 41 TCCTGCAGCGCCACTGGCTTCACCACGCGGTCAGACATTGG TCCTGCAGCGCCACTGGCTTCATCACGCGGTCAGACATTGG < 41bp 0.748535891476815 0.465325958198197 0.58147997 0.4955236 prediction 0.49707178295363 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62614412 chr20:62614414 nonsynonymous SNV 0.987 3 23 hm5C_associated_SNPs_65774 0 0 28 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:62614400-62614420
64251 chr5 74647131 74647131 1 + G T UCEC 74647128 + 74647108 74647148 41 AGGAAGAGACAGGGATAAACCGAGAAAGAAAAGGTAACTTG AGGAAGAGACAGGGATAAACCGATAAAGAAAAGGTAACTTG < 41bp 0.899421808007586 0.650898297320621 0.8537251 0.477468 prediction 0.49704702137393 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74647128 chr5:74647131 stopgain 0.871 0 24 hm5C_associated_SNPs_65781 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:74647095-74647133
64251 chr4 134073825 134073825 1 + C T LUSC 134073823 + 134073803 134073843 41 TCTTAAGCCCTGCAGCCCTTCGCGGAGTACGGACACTGAGC TCTTAAGCCCTGCAGCCCTTCGTGGAGTACGGACACTGAGC < 41bp 0.751056165361799 0.502538308186802 0.3938426 0.5230739 prediction 0.497035714349993 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073823 chr4:134073825 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_65782 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:134073817-134073840
64251 chr14 70171364 70171364 1 + A T SKCM 70171360 + 70171340 70171380 41 ACTTGGGGTCCCCACGCTGTCTATAGTGGCTTCTACTGCCA ACTTGGGGTCCCCACGCTGTCTATTGTGGCTTCTACTGCCA < 41bp 0.748514201035021 0.405893932237049 0.25149107 0.039733797 prediction 0.497028402070041 Functional Loss - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70171360 chr14:70171364 synonymous SNV . 0 25 hm5C_associated_SNPs_65783 0 0 1 SF3B4 POSTAR2 ENCODE chr14:70171260-70171374
64251 chr20 20349964 20349964 1 + G C rs559019738 20349963 + 20349943 20349983 41 CGGCGGCAGCGACCGGGACACGCCGAGCCCCGGCGGCGTGT CGGCGGCAGCGACCGGGACACCCCGAGCCCCGGCGGCGTGT < 41bp 0.8539489843002 0.605448694226411 0.82596385 0.74950373 prediction 0.497000580147579 Functional Loss - INSM1 ENSG00000173404 CDS Human protein_coding chr20:20349963 chr20:20349964 synonymous SNV . 0 22 hm5C_associated_SNPs_65787 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:20349964-20349965
64251 chr5 162945236 162945236 1 + G T UCEC 162945233 + 162945213 162945253 41 TGTCCTAGGAGCACAACGTCCGAGAAATGCTCAGCTTGACT TGTCCTAGGAGCACAACGTCCGATAAATGCTCAGCTTGACT < 41bp 0.893658083204393 0.645158831156745 0.4955603 0.2234573 prediction 0.496998504095295 Functional Loss - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945233 chr5:162945236 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_65789 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:162945201-162945298
64251 chr9 71869414 71869414 1 + C T UCEC 71869412 + 71869392 71869432 41 GAGACGTGGTGGGACTCCAGCTCGTGTGTCCTCATGGAGAA GAGACGTGGTGGGACTCCAGCTTGTGTGTCCTCATGGAGAA < 41bp 0.748482253187053 0.494110096537786 0.1203897 0.056824207 prediction 0.496964506374106 Functional Loss - TJP2 ENSG00000269295 CDS Human other chr9:71869412 chr9:71869414 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_65792 0 0 1 RBM15 POSTAR2 ENCODE chr9:71869377-71869417
64251 chr1 46033816 46033816 1 + C T SKCM 46033814 + 46033794 46033834 41 GTCGGCAGATTGATGACATACTCAGTGTGGCCTCCGTGCGT GTCGGCAGATTGATGACATACTTAGTGTGGCCTCCGTGCGT < 41bp 0.806601769105767 0.558123336196232 0.026247442 0.0477809 prediction 0.496956865819071 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033814 chr1:46033816 synonymous SNV . 0 23 hm5C_associated_SNPs_65793 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:46033769-46033829
64251 chr22 29438502 29438502 1 + G C LIHC 29438501 + 29438481 29438521 41 AGGCCAAGCGAGCAGTACAGCGGGGAGCTACTGCAGTCATC AGGCCAAGCGAGCAGTACAGCCGGGAGCTACTGCAGTCATC < 41bp 0.748470297280754 0.423558836115529 0.9003327 0.7928475 prediction 0.496940594561508 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29438501 chr22:29438502 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_65794 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:29438496-29438521
64251 chr16 19710946 19710946 1 + C T STAD 19710944 + 19710924 19710964 41 TGTGGCACCTGGCACAGAGGCACGGCTGTGCAGACACCAGG TGTGGCACCTGGCACAGAGGCATGGCTGTGCAGACACCAGG < 41bp 0.78948344713878 0.541014819897967 0.1100598 0.1992493 prediction 0.496937254481626 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19710944 chr16:19710946 synonymous SNV . 0 23 hm5C_associated_SNPs_65796 0 0 1 ZNF622 POSTAR2 ENCODE chr16:19710900-19710969
64251 chr14 24617532 24617532 1 + C T COAD 24617530 + 24617510 24617550 41 AACCAGATGGGTTGAGCTTCCCCGAAGGGCAGGAGGAGCCA AACCAGATGGGTTGAGCTTCCCTGAAGGGCAGGAGGAGCCA < 41bp 0.748454105775736 0.468660483534943 0.14404482 0.08947712 prediction 0.496908211551473 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617530 chr14:24617532 synonymous SNV . 0 23 hm5C_associated_SNPs_65802 0 0 7 DDX55 POSTAR2 ENCODE chr14:24617457-24617545
64251 chr14 24617533 24617533 1 + G T HNSC 24617530 + 24617510 24617550 41 AACCAGATGGGTTGAGCTTCCCCGAAGGGCAGGAGGAGCCA AACCAGATGGGTTGAGCTTCCCCTAAGGGCAGGAGGAGCCA < 41bp 0.748454105775736 0.364319740593267 0.14404482 0.06288692 prediction 0.496908211551473 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617530 chr14:24617533 stopgain 0.991 1 24 hm5C_associated_SNPs_65803 0 0 7 DDX55 POSTAR2 ENCODE chr14:24617457-24617545
64251 chr1 22895810 22895810 1 + C T rs367916042 22895808 + 22895788 22895828 41 TGCTGGACACGTCGACCATCCACGGGGACTGGGGCTGGCTC TGCTGGACACGTCGACCATCCATGGGGACTGGGGCTGGCTC < 41bp 0.775709428670383 0.527263889848765 0.5952621 0.42247048 prediction 0.496891077643235 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22895808 chr1:22895810 synonymous SNV . 0 23 hm5C_associated_SNPs_65806 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:22895800-22895820
64251 chr15 22954217 22954217 1 + C T STAD 22954215 + 22954195 22954235 41 CTGTGTCCCCCGCAGGTGATCGCCATGATCAAAGGCCTGCA CTGTGTCCCCCGCAGGTGATCGTCATGATCAAAGGCCTGCA < 41bp 0.810626712363189 0.562194697441897 0.6359961 0.30345637 prediction 0.496864029842583 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22954215 chr15:22954217 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_65809 0 0 15 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:22954217-22954253
64251 chr12 42836513 42836513 1 + C T SKCM 42836511 + 42836491 42836531 41 AAATGGATCACGACGGAACCCCCGAAAACGAAGGCGAAGAG AAATGGATCACGACGGAACCCCTGAAAACGAAGGCGAAGAG < 41bp 0.780228369822589 0.531799841464914 0.026444793 0.04280427 prediction 0.49685705671535 Functional Loss - PPHLN1 ENSG00000134283 CDS Human protein_coding chr12:42836511 chr12:42836513 synonymous SNV . 0 23 hm5C_associated_SNPs_65810 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:42836486-42836514
64251 chr19 41271032 41271032 1 + C T STAD 41271030 + 41271010 41271050 41 GCCCTGCAGGGCTTTAAGATCACGCAGAACAACGCCATGAA GCCCTGCAGGGCTTTAAGATCATGCAGAACAACGCCATGAA < 41bp 0.758258262325382 0.509832462586403 0.17961732 0.19352183 prediction 0.496851599477958 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41271030 chr19:41271032 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_65811 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41271000-41271040
64251 chr14 23311685 23311685 1 + C T PAAD 23311683 + 23311663 23311703 41 AGGCCATTCGCAAGGCGTTCCGCGTGTGGGAGAGTGCCACA AGGCCATTCGCAAGGCGTTCCGTGTGTGGGAGAGTGCCACA < 41bp 0.792994931514428 0.544569993993779 0.9112275 0.8885124 prediction 0.496849875041297 Functional Loss - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23311683 chr14:23311685 synonymous SNV . 0 23 hm5C_associated_SNPs_65813 0 0 1 SND1 POSTAR2 ENCODE chr14:23311621-23311703
64251 chr2 211473190 211473190 1 + G T GBM 211473188 + 211473168 211473208 41 CAGCCTGTTTTGAACCTAGCCTGGATTACATGGTCACCAAG CAGCCTGTTTTGAACCTAGCCTTGATTACATGGTCACCAAG < 41bp 0.74842334751277 0.41733066684421 0.32016808 0.075425625 prediction 0.496846695025539 Functional Loss - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211473188 chr2:211473190 synonymous SNV . 0 23 hm5C_associated_SNPs_65814 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:211473163-211473191
64251 chr15 66599253 66599253 1 + C T GBM 66599251 + 66599231 66599271 41 CCAGCAATGCTGCTATCTGCCACGGGAAAGAGGAGAGTCCA CCAGCAATGCTGCTATCTGCCATGGGAAAGAGGAGAGTCCA < 41bp 0.811088647032719 0.562697762187799 0.17951652 0.17637166 prediction 0.49678176968984 Functional Loss - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66599251 chr15:66599253 nonsynonymous SNV 0.088 4 23 hm5C_associated_SNPs_65823 0 0 1 BUD13 POSTAR2 ENCODE chr15:66599142-66599291
64251 chr1 154960590 154960590 1 + C T SKCM 154960588 + 154960568 154960608 41 CTTCAACCCCCAGGGACACACTCAGGACACCAACACCTTCT CTTCAACCCCCAGGGACACACTTAGGACACCAACACCTTCT < 41bp 0.798566575136512 0.55017569482974 0.0037423074 0.0068517923 prediction 0.496781760613543 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960588 chr1:154960590 stopgain 1.000 1 23 hm5C_associated_SNPs_65824 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:154960492-154960624
64251 chr17 45016106 45016106 1 + G T OV 45016103 + 45016083 45016123 41 TGACCTGTGTGGTCATGTTCCTCGTGGTGCAGTACCTGACA TGACCTGTGTGGTCATGTTCCTCTTGGTGCAGTACCTGACA < 41bp 0.748382856548658 0.364198124664328 0.15108553 0.2866084 prediction 0.496765713097317 Functional Loss - GOSR2 ENSG00000108433 CDS Human protein_coding chr17:45016103 chr17:45016106 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_65825 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:45016089-45016117
64251 chr13 100959473 100959473 1 + G T THYM 100959471 + 100959451 100959491 41 AGTGGACAGTGGCATCCAACCAGGAAGTGATATTAGCATTT AGTGGACAGTGGCATCCAACCATGAAGTGATATTAGCATTT < 41bp 0.748377105846664 0.436063863652553 0.9039996 0.2808791 prediction 0.496754211693327 Functional Loss - PCCA ENSG00000175198 CDS Human protein_coding chr13:100959471 chr13:100959473 stopgain 1.000 1 23 hm5C_associated_SNPs_65828 0 0 6 U2AF1 POSTAR2 ENCODE chr13:100959461-100959484
64251 chr8 28608183 28608183 1 + C T COAD 28608181 + 28608161 28608201 41 CTCCCGTTTCCAGGTGACCTCACGGTGGACATTCCGATGCC CTCCCGTTTCCAGGTGACCTCATGGTGGACATTCCGATGCC < 41bp 0.774892517424116 0.526524630018357 0.92675185 0.91288 prediction 0.496735774811517 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28608181 chr8:28608183 nonsynonymous SNV 0.310 4 23 hm5C_associated_SNPs_65832 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28608171-28608223
64251 chr6 26156642 26156642 1 + G T STAD 26156639 + 26156619 26156659 41 ATGTCCGAGACTGCGCCTGCCGCGCCCGCTGCTCCGGCCCC ATGTCCGAGACTGCGCCTGCCGCTCCCGCTGCTCCGGCCCC < 41bp 0.748358337589219 0.368222839256038 0.1360785 0.12054852 prediction 0.496716675178438 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156639 chr6:26156642 synonymous SNV . 0 24 hm5C_associated_SNPs_65834 0 0 57 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr11 114311384 114311384 1 + G T UCEC 114311382 + 114311362 114311402 41 TTATTTTTAATTGCAGATGACAGGATTGGACATTGAGAAGG TTATTTTTAATTGCAGATGACATGATTGGACATTGAGAAGG < 41bp 0.748357141557825 0.431462521798458 0.40859282 0.14567897 prediction 0.496714283115649 Functional Loss - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114311382 chr11:114311384 stopgain 1.000 1 23 hm5C_associated_SNPs_65835 0 0 20 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:114311351-114311387
64251 chr5 140475639 140475639 1 + C T UCEC 140475637 + 140475617 140475657 41 ACCAGATCCGAATACAACATCACCATCACCGTCACCGACTT ACCAGATCCGAATACAACATCATCATCACCGTCACCGACTT < 41bp 0.748353267285494 0.489566731963976 0.019619197 0.012533933 prediction 0.496706534570987 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475637 chr5:140475639 nonsynonymous SNV 0.767 1 23 hm5C_associated_SNPs_65836 0 0 1 SND1 POSTAR2 ENCODE chr5:140475592-140475642
64251 chr12 12788786 12788786 1 + G T KIRC 12788783 + 12788763 12788803 41 AAATTGACTTGAAAGCAAAACTTGAGAGGAGCCGGCAGAGT AAATTGACTTGAAAGCAAAACTTTAGAGGAGCCGGCAGAGT < 41bp 0.74835216101077 0.366438638683426 0.071925044 0.06483641 prediction 0.49670432202154 Functional Loss - CREBL2 ENSG00000111269 CDS Human protein_coding chr12:12788783 chr12:12788786 stopgain 0.999 1 24 hm5C_associated_SNPs_65837 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:12788771-12788798
64251 chr20 61588288 61588288 1 + G T UCEC 61588286 + 61588266 61588306 41 TCTGGGGCTACTGCCTGACACAGGTTGTGGGCGGCCACCTC TCTGGGGCTACTGCCTGACACATGTTGTGGGCGGCCACCTC < 41bp 0.892699048344625 0.644349507186321 0.89042485 0.4174496 prediction 0.49669908231661 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61588286 chr20:61588288 nonsynonymous SNV 0.939 4 23 hm5C_associated_SNPs_65840 0 0 3 GRWD1 POSTAR2 ENCODE chr20:61588286-61588314
64251 chr12 58002452 58002452 1 + A C UCS 58002451 + 58002431 58002471 41 TATCGGCACGTCCATGACCACAGGGAGACCGAATGTCATCA TATCGGCACGTCCATGACCACCGGGAGACCGAATGTCATCA < 41bp 0.748349216527172 0.487145501690674 0.8139715 0.3497556 prediction 0.496698433054345 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002451 chr12:58002452 synonymous SNV . 0 22 hm5C_associated_SNPs_65841 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:58002440-58002460
64251 chr4 37848597 37848597 1 + G T LUAD 37848595 + 37848575 37848615 41 GCAATGAGTTGGGGGCCCTCCTGGGCTGGTGGCTTTTTACA GCAATGAGTTGGGGGCCCTCCTTGGCTGGTGGCTTTTTACA < 41bp 0.882127099306452 0.633778341800776 0.8813925 0.17104504 prediction 0.496697515011352 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37848595 chr4:37848597 synonymous SNV . 0 23 hm5C_associated_SNPs_65842 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr4:37848575-37848609
64251 chr2 175265748 175265748 1 + A T LUAD 175265744 + 175265724 175265764 41 CCTTGAAAGAGCTGATACAGCTGAAAAAGCCCTCAATGTCA CCTTGAAAGAGCTGATACAGCTGATAAAGCCCTCAATGTCA < 41bp 0.748318163763831 0.424155567254447 0.0870384 0.0482212 prediction 0.496636327527661 Functional Loss - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175265744 chr2:175265748 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_65852 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:175265730-175265767
64251 chr7 6194338 6194338 1 + C T LUSC 6194336 + 6194316 6194356 41 GGGGCCGGGAGAAGTTCTACCCCGACAGGCCGCGCTGGGAC GGGGCCGGGAGAAGTTCTACCCTGACAGGCCGCGCTGGGAC < 41bp 0.803300652622622 0.554993426523248 0.033993274 0.050278574 prediction 0.496614452198748 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6194336 chr7:6194338 synonymous SNV . 0 23 hm5C_associated_SNPs_65854 0 0 1 FXR2 POSTAR2 ENCODE chr7:6194290-6194351
64251 chr16 2806491 2806491 1 + G T SARC 2806489 + 2806469 2806509 41 ACTACAAGGGAGAGGAGGAACTGCGGCGCCTGGAGGCTGCC ACTACAAGGGAGAGGAGGAACTTCGGCGCCTGGAGGCTGCC < 41bp 0.748300423052145 0.410510397147523 0.7499831 0.5167494 prediction 0.49660084610429 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2806489 chr16:2806491 synonymous SNV . 0 23 hm5C_associated_SNPs_65856 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2806433-2806495
64251 chr19 13054702 13054702 1 + C T SKCM 13054700 + 13054680 13054720 41 GAAGATGAGGAGGAAGATGTCCCCGGCCAGGCCAAGGACGA GAAGATGAGGAGGAAGATGTCCTCGGCCAGGCCAAGGACGA < 41bp 0.748289629135066 0.495671077744142 0.17104486 0.12123644 prediction 0.496579258270133 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13054700 chr19:13054702 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_65859 0 0 50 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:13054537-13054774
64251 chr17 61684797 61684797 1 + A C OV 61684793 + 61684773 61684813 41 AGCTGAGGATGTCAAGGAAACTGAAGATGAAGAAGAAAGGA AGCTGAGGATGTCAAGGAAACTGACGATGAAGAAGAAAGGA < 41bp 0.748275988161835 0.329396652690223 0.6288697 0.2751738 prediction 0.496551976323669 Functional Loss - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61684793 chr17:61684797 nonsynonymous SNV 0.937 1 25 hm5C_associated_SNPs_65863 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:61684687-61684821
64251 chr11 119207119 119207119 1 + C T COAD 119207117 + 119207097 119207137 41 GCCGGGGCATCCTGCAGACCCTCAATGTCTACCTCTGAAGC GCCGGGGCATCCTGCAGACCCTTAATGTCTACCTCTGAAGC < 41bp 0.77096968651798 0.522697646630802 0.20525578 0.040213913 prediction 0.496544079774356 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119207117 chr11:119207119 synonymous SNV . 0 23 hm5C_associated_SNPs_65866 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:119207100-119207120
64251 chr17 34313607 34313607 1 - G A COAD 34313609 - 34313589 34313629 41 GACCAAGACTGAATCCTCCTCACGTGAGTGCAATGCCTTGT GACCAAGACTGAATCCTCCTCATGTGAGTGCAATGCCTTGT < 41bp 0.748263636798343 0.498740136499386 0.3209346 0.269454 prediction 0.496527273596687 Functional Loss - CCL14 ENSG00000213494;ENSG00000266956 CDS Human other chr17:34313609 chr17:34313607 stopgain 0.007 1 23 hm5C_associated_SNPs_65868 0 0 1 PRPF8 POSTAR2 ENCODE chr17:34313567-34313628
64251 chr17 34313606 34313606 1 - C A GBM 34313609 - 34313589 34313629 41 GACCAAGACTGAATCCTCCTCACGTGAGTGCAATGCCTTGT GACCAAGACTGAATCCTCCTCACTTGAGTGCAATGCCTTGT < 41bp 0.748263636798343 0.361602186947657 0.3209346 0.1596551 prediction 0.496527273596687 Functional Loss - CCL14 ENSG00000266956;ENSG00000161574;ENSG00000213494 exonic;splicing Human other chr17:34313609 chr17:34313606 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_65869 0 0 1 PRPF8 POSTAR2 ENCODE chr17:34313567-34313628
64251 chr9 97203305 97203305 1 + C T DLBC 97203303 + 97203283 97203323 41 ATTTCTGTGTCTGGAGTCTTCTCGGTCACGTTTTCTGTTAT ATTTCTGTGTCTGGAGTCTTCTTGGTCACGTTTTCTGTTAT < 41bp 0.748258643496297 0.460484979491658 0.52970344 0.38622117 prediction 0.496517286992593 Functional Loss - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97203303 chr9:97203305 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_65871 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:97203300-97203320
64251 chr3 169501317 169501317 1 + A T STAD 169501313 + 169501293 169501333 41 TGGGAAAAGTTTTATTTCCTCAGGAGAGCTCAACAAACACT TGGGAAAAGTTTTATTTCCTCAGGTGAGCTCAACAAACACT < 41bp 0.854442229734727 0.606185735897412 0.45149273 0.46502927 prediction 0.49651298767463 Functional Loss - MYNN ENSG00000085274 CDS Human protein_coding chr3:169501313 chr3:169501317 synonymous SNV . 0 25 hm5C_associated_SNPs_65873 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:169501301-169501324
64251 chr17 8160232 8160232 1 + C T STAD 8160230 + 8160210 8160250 41 AGTGCACAGGCCGCGGGGCCCACGTGGTGGCTGGCACTGCC AGTGCACAGGCCGCGGGGCCCATGTGGTGGCTGGCACTGCC < 41bp 0.748253908939209 0.483124060177281 0.7524916 0.56261444 prediction 0.496507817878417 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8160230 chr17:8160232 synonymous SNV . 0 23 hm5C_associated_SNPs_65874 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:8160232-8160233
64251 chr3 183910676 183910676 1 + A C UCEC 183910672 + 183910652 183910692 41 GTGCTGTGGAACTGCTGGCACGCAAGTTTCCTGGTGAGTTA GTGCTGTGGAACTGCTGGCACGCACGTTTCCTGGTGAGTTA < 41bp 0.748243304126537 0.331671958312337 0.3497907 0.15583384 prediction 0.496486608253074 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183910672 chr3:183910676 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_65876 0 0 4 PPIG POSTAR2 ENCODE chr3:183910643-183910684
64251 chr8 125499769 125499769 1 + A C rs76014606 125499768 + 125499748 125499788 41 GAAGCTGCTGCTGAATCTGACAGGGAATTGAACGAAGATGA GAAGCTGCTGCTGAATCTGACCGGGAATTGAACGAAGATGA < 41bp 0.758644164716066 0.51040178025776 0.7882998 0.3552446 prediction 0.496484768916613 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125499768 chr8:125499769 synonymous SNV . 0 22 hm5C_associated_SNPs_65877 0 0 7 CSTF2 POSTAR2 GSE37401,GSM917676 chr8:125499740-125499778
64251 chr11 118516195 118516195 1 + G T LUAD 118516192 + 118516172 118516212 41 GCACCCTTCCCAGCGGGCCCCTCGGGCTTCCCCCCTCTCAT GCACCCTTCCCAGCGGGCCCCTCTGGCTTCCCCCCTCTCAT < 41bp 0.748235875158264 0.363960883714734 0.510616 0.2427975 prediction 0.496471750316527 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516192 chr11:118516195 synonymous SNV . 0 24 hm5C_associated_SNPs_65880 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:118516188-118516236
64251 chr9 133498141 133498141 1 + G T SKCM 133498139 + 133498119 133498159 41 GGGATTGTAATAGGAAGAAACGGGGAAATGATCAAAAAGAT GGGATTGTAATAGGAAGAAACGTGGAAATGATCAAAAAGAT < 41bp 0.748233519523228 0.406646808105688 0.88948286 0.29810494 prediction 0.496467039046456 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133498139 chr9:133498141 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_65881 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr9:133498108-133498148
64251 chr1 156132760 156132760 1 + G T rs554765573 156132758 + 156132738 156132778 41 GGTTGGCGGGACCAGGAGCTCTGCGGTTTGTGCCTTCTCTC GGTTGGCGGGACCAGGAGCTCTTCGGTTTGTGCCTTCTCTC < 41bp 0.881565616147388 0.633335133399704 0.8520112 0.47202015 prediction 0.496460965495368 Functional Loss - SEMA4A ENSG00000196189 CDS Human protein_coding chr1:156132758 chr1:156132760 nonsynonymous SNV 0.977 4 23 hm5C_associated_SNPs_65882 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:156132750-156132790
64251 chr18 32886652 32886652 1 + G T LUAD 32886649 + 32886629 32886669 41 TCTGCATCAGAGAATCCATACTGGGGAGAAACCATATCCAT TCTGCATCAGAGAATCCATACTGTGGAGAAACCATATCCAT < 41bp 0.748217116128999 0.373859806008673 0.055933207 0.08034167 prediction 0.496434232257999 Functional Loss - ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32886649 chr18:32886652 . . 0 24 hm5C_associated_SNPs_65885 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr18:32886640-32886670
64251 chr10 93740301 93740301 1 + G T UCEC 93740298 + 93740278 93740318 41 TGGAAAGCAGCCAGGAAATTCTGGACCTTATTCACAAGGTA TGGAAAGCAGCCAGGAAATTCTGTACCTTATTCACAAGGTA < 41bp 0.748199976343477 0.376185878111281 0.2591953 0.2040816 prediction 0.496399952686954 Functional Loss - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93740298 chr10:93740301 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_65891 0 0 9 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:93740292-93740315
64251 chr7 64863920 64863920 1 + C T UCEC 64863918 + 64863898 64863938 41 GGCAAGGCCTTTAACCAGTTCTCGATTCTTAATAAACATAA GGCAAGGCCTTTAACCAGTTCTTGATTCTTAATAAACATAA < 41bp 0.748185760424299 0.475632176757221 0.10775468 0.04042822 prediction 0.496371520848598 Functional Loss - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64863918 chr7:64863920 nonsynonymous SNV 0.575 3 23 hm5C_associated_SNPs_65895 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr7:64863899-64863921
64251 chr8 59059474 59059474 1 + A C GBM 59059473 + 59059453 59059493 41 CCTCCCCTGCCTCCCAAGCCCAAAATCGCAGCCATCGCCTC CCTCCCCTGCCTCCCAAGCCCCAAATCGCAGCCATCGCCTC < 41bp 0.748156447698469 0.488512359397259 0.068113685 0.024143577 prediction 0.496312895396938 Functional Loss - FAM110B ENSG00000169122 CDS Human protein_coding chr8:59059473 chr8:59059474 nonsynonymous SNV 0.935 1 22 hm5C_associated_SNPs_65899 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:59059439-59059496
64251 chr12 58002361 58002361 1 + C T STAD 58002359 + 58002339 58002379 41 ACCACACGGGTGGCCTACCTCCCGGACTGCCCTGAGGGCAA ACCACACGGGTGGCCTACCTCCTGGACTGCCCTGAGGGCAA < 41bp 0.807763908458281 0.559632897967351 0.25220537 0.25691903 prediction 0.49626202098186 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002359 chr12:58002361 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_65905 0 0 1 PPIG POSTAR2 ENCODE chr12:58002340-58002401
64251 chr2 113955395 113955395 1 + C T CESC 113955393 + 113955373 113955413 41 TGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCC TGGATGAGCCCGTGGGGGTGCATCACTCGCTGGCCACCCCC < 41bp 0.819237931535746 0.571141715198281 0.39307284 0.46245706 prediction 0.49619243267493 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113955393 chr2:113955395 synonymous SNV . 0 23 hm5C_associated_SNPs_65910 0 0 1 PPIG POSTAR2 ENCODE chr2:113955322-113955409
64251 chr1 203036920 203036920 1 + G C LUSC 203036916 + 203036896 203036936 41 GAGGAGAGCCAGCATGAGATCAAGGGTAAGCTCGTCAGGCT GAGGAGAGCCAGCATGAGATCAAGCGTAAGCTCGTCAGGCT < 41bp 0.748087519050681 0.465058869652849 0.91992724 0.88831246 prediction 0.496175038101361 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203036916 chr1:203036920 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_65913 0 0 2 BUD13 POSTAR2 ENCODE chr1:203036848-203036933
64251 chr5 137803577 137803577 1 + C T BLCA 137803575 + 137803555 137803595 41 TCCTTCTCCTCTCCCGGCTCCTCGACCTACCCATCCCCTGT TCCTTCTCCTCTCCCGGCTCCTTGACCTACCCATCCCCTGT < 41bp 0.748085510591116 0.494625389666193 0.15104684 0.08294812 prediction 0.496171021182233 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803575 chr5:137803577 nonsynonymous SNV 0.955 4 23 hm5C_associated_SNPs_65914 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137803432-137803577
64251 chr8 97797535 97797535 1 + G T UCEC 97797533 + 97797513 97797553 41 ATAGCCATCCTGGGTCTTGGCAGCAGCATTGGGACTCCTCC ATAGCCATCCTGGGTCTTGGCATCAGCATTGGGACTCCTCC < 41bp 0.748083998915412 0.406600638932795 0.8999864 0.20620173 prediction 0.496167997830823 Functional Loss - CPQ ENSG00000104324 CDS Human protein_coding chr8:97797533 chr8:97797535 nonsynonymous SNV 0.904 1 23 hm5C_associated_SNPs_65915 0 0 6 BUD13 POSTAR2 ENCODE chr8:97797519-97797562
64251 chr6 26251932 26251932 1 + G C rs139273319 26251931 + 26251911 26251951 41 GAAGAAGGGCTCCAAGAAGGCGGTGACCAAGGCGCAGAAGA GAAGAAGGGCTCCAAGAAGGCCGTGACCAAGGCGCAGAAGA < 41bp 0.748075332010012 0.456342507291055 0.37666732 0.13712656 prediction 0.496150664020023 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26251931 chr6:26251932 synonymous SNV . 0 22 hm5C_associated_SNPs_65918 0 0 6 EIF3D POSTAR2 ENCODE chr6:26251884-26252016
64251 chr2 86716722 86716722 1 + A T ESCA 86716718 + 86716698 86716738 41 TATTGAAGGAAAAGAGAAGCCAGGAGCACTGTGGCACATAT TATTGAAGGAAAAGAGAAGCCAGGTGCACTGTGGCACATAT < 41bp 0.857487522586782 0.609418367169187 0.37579277 0.3950339 prediction 0.496138310835191 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86716718 chr2:86716722 synonymous SNV . 0 25 hm5C_associated_SNPs_65921 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:86716703-86716761
64251 chrX 115586549 115586549 1 + G T UCEC 115586547 + 115586527 115586567 41 GAACAGATTCATTGAGGATACAGAAATGATGATTGGAGCAA GAACAGATTCATTGAGGATACATAAATGATGATTGGAGCAA < 41bp 0.748062037739667 0.42338416686045 0.33744967 0.18962818 prediction 0.496124075479334 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115586547 chrX:115586549 stopgain 1.000 1 23 hm5C_associated_SNPs_65927 0 0 1 SMNDC1 POSTAR2 ENCODE chrX:115586548-115586610
64251 chr16 1549333 1549333 1 + C T GBM 1549331 + 1549311 1549351 41 CTGTTCTTACAGTCCCGGCTCACGGTGAGGACGCCACGGAG CTGTTCTTACAGTCCCGGCTCATGGTGAGGACGCCACGGAG < 41bp 0.749046025932391 0.500987194879409 0.4998212 0.59383017 prediction 0.496117662105964 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1549331 chr16:1549333 nonsynonymous SNV 0.645 2 23 hm5C_associated_SNPs_65928 0 0 6 PRPF8 POSTAR2 ENCODE chr16:1549324-1549371
64251 chr1 44878028 44878028 1 + G T LUAD 44878025 + 44878005 44878045 41 TGCCAGGCACTTTTGCCAATCGTGATTTCCCCCCTTCTCTA TGCCAGGCACTTTTGCCAATCGTTATTTCCCCCCTTCTCTA < 41bp 0.748052147343067 0.366621198048843 0.22753066 0.060376316 prediction 0.496104294686134 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878025 chr1:44878028 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65930 0 0 1 PCBP2 POSTAR2 ENCODE chr1:44877993-44878099
64251 chr18 33289661 33289661 1 + G T SARC 33289659 + 33289639 33289679 41 GAAGAGGATAGCCAGGTGCCCAGCATTAGAGACTGCAATGG GAAGAGGATAGCCAGGTGCCCATCATTAGAGACTGCAATGG < 41bp 0.852921301312652 0.604869575744839 0.12997031 0.12548795 prediction 0.496103451135626 Functional Loss - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33289659 chr18:33289661 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_65931 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:33289645-33289664
64251 chr10 112350867 112350867 1 + G C LUAD 112350863 + 112350843 112350883 41 CCTCTTAACAAGTTAGATGTCAGGGATACAGCCTATCCTGA CCTCTTAACAAGTTAGATGTCAGGCATACAGCCTATCCTGA < 41bp 0.808210111074413 0.560163093110673 0.9161595 0.3735193 prediction 0.49609403592748 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112350863 chr10:112350867 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_65932 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:112350802-112350957
64251 chr6 125284011 125284011 1 + G T SARC 125284009 + 125283989 125284029 41 CCTTGCCACTGCAGTTGGAGCTGGAGGAGGAAGAGGAGGAA CCTTGCCACTGCAGTTGGAGCTTGAGGAGGAAGAGGAGGAA < 41bp 0.879107636522227 0.631086476302133 0.83180285 0.3641131 prediction 0.49604232044019 Functional Loss - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125284009 chr6:125284011 synonymous SNV . 0 23 hm5C_associated_SNPs_65940 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221660 chr6:125284000-125284020
64251 chr12 54936449 54936449 1 + C T COAD 54936447 + 54936427 54936467 41 AAATGCCTATCGGGAGGTGTCTCGGGCCTTCCACCTAAACT AAATGCCTATCGGGAGGTGTCTTGGGCCTTCCACCTAAACT < 41bp 0.748012793754668 0.48348304532869 0.36490178 0.42836112 prediction 0.496025587509336 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54936447 chr12:54936449 nonsynonymous SNV 0.909 4 23 hm5C_associated_SNPs_65943 0 0 1 DDX55 POSTAR2 ENCODE chr12:54936433-54936543
64251 chr15 75094420 75094420 1 + G T UCEC 75094417 + 75094397 75094437 41 CTTTGGGCGAGTGCCTTATCCAAGAATTGTGAGTATGGGTA CTTTGGGCGAGTGCCTTATCCAATAATTGTGAGTATGGGTA < 41bp 0.748007467525854 0.367288192596319 0.6640841 0.075900465 prediction 0.496014935051708 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75094417 chr15:75094420 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_65944 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:75094407-75094480
64251 chr11 93486866 93486866 1 + G T LUSC 93486863 + 93486843 93486883 41 CTTAGGCATCTGTGGGAAAACTAGAATTGCAGAAGTTGGAG CTTAGGCATCTGTGGGAAAACTATAATTGCAGAAGTTGGAG < 41bp 0.900696943220783 0.652691691046045 0.4975885 0.48584327 prediction 0.496010504349476 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93486863 chr11:93486866 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_65945 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:93486861-93486891
64251 chr7 127326706 127326706 1 + C T BRCA 127326704 + 127326684 127326724 41 CATCATTGTCCGAGGTCAGCCTCGTGGTGGGCCTCCTCCTG CATCATTGTCCGAGGTCAGCCTTGTGGTGGGCCTCCTCCTG < 41bp 0.747992415336481 0.485936888346015 0.410509 0.5846045 prediction 0.495984830672963 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127326704 chr7:127326706 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_65950 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:127326702-127326724
64251 chr7 127326707 127326707 1 + G T STAD 127326704 + 127326684 127326724 41 CATCATTGTCCGAGGTCAGCCTCGTGGTGGGCCTCCTCCTG CATCATTGTCCGAGGTCAGCCTCTTGGTGGGCCTCCTCCTG < 41bp 0.747992415336481 0.381427040873978 0.410509 0.81603116 prediction 0.495984830672963 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127326704 chr7:127326707 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_65951 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:127326702-127326724
64251 chr3 42700986 42700986 1 + G T STAD 42700983 + 42700963 42701003 41 TCCCCACAGTCACATGGCCACACGGTCCCGGGAGAACGCCC TCCCCACAGTCACATGGCCACACTGTCCCGGGAGAACGCCC < 41bp 0.747988056273041 0.349786779069811 0.41300863 0.15505892 prediction 0.495976112546081 Functional Loss - ZBTB47 ENSG00000114853 CDS Human protein_coding chr3:42700983 chr3:42700986 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_65954 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:42700942-42700996
64251 chr9 6413381 6413381 1 + G C rs562598186 6413380 + 6413360 6413400 41 GTCCGGTGGGCGCGCTCGCCCGCCTGCCGCTGAGGGCCCGA GTCCGGTGGGCGCGCTCGCCCCCCTGCCGCTGAGGGCCCGA < 41bp 0.80886706637285 0.560881574406331 0.05791521 0.017359197 prediction 0.495970983933038 Functional Loss - UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413380 chr9:6413381 . . 0 22 hm5C_associated_SNPs_65955 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:6413379-6413407
64251 chr1 1387813 1387813 1 + C T LGG 1387811 + 1387791 1387831 41 GACCGGGACAAAGTGACAGCCACGGTAAACATACTCATAAA GACCGGGACAAAGTGACAGCCATGGTAAACATACTCATAAA < 41bp 0.780716017438747 0.532730727119079 0.7992524 0.282936 prediction 0.495970580639337 Functional Loss - ATAD3C ENSG00000215915 CDS Human protein_coding chr1:1387811 chr1:1387813 nonsynonymous SNV 0.834 5 23 hm5C_associated_SNPs_65956 0 0 1 BUD13 POSTAR2 ENCODE chr1:1387784-1387855
64251 chr22 50655553 50655553 1 + C T UCEC 50655551 + 50655531 50655571 41 GCTGCCGAGCGCGGGGACTTCTCAGAGGCAAGCACACGCCT GCTGCCGAGCGCGGGGACTTCTTAGAGGCAAGCACACGCCT < 41bp 0.78442792696249 0.53645003980683 0.42022043 0.24746993 prediction 0.49595577431132 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50655551 chr22:50655553 unknown 0.983 2 23 hm5C_associated_SNPs_65958 0 0 1 TBRG4 POSTAR2 ENCODE chr22:50655520-50655554
64251 chr6 170639566 170639566 1 + G C LUSC 170639562 + 170639542 170639582 41 ACCAGCACCTGCCTAGCTGTCAAGGAGTGGTTTGTGTATCC ACCAGCACCTGCCTAGCTGTCAAGCAGTGGTTTGTGTATCC < 41bp 0.83376386382435 0.585805123782406 0.893473 0.33248734 prediction 0.495917480083889 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170639562 chr6:170639566 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_65967 0 0 1 GRWD1 POSTAR2 ENCODE chr6:170639536-170639569
64251 chr9 133507634 133507634 1 + G T THYM 133507632 + 133507612 133507652 41 AGGGCTGGGGCAGCACCTACCAGGCGTGGCAGCAGCCCACA AGGGCTGGGGCAGCACCTACCATGCGTGGCAGCAGCCCACA < 41bp 0.897744854151247 0.649786928737397 0.8772118 0.10455096 prediction 0.495915850827701 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133507632 chr9:133507634 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_65968 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr9:133507611-133507637
64251 chr10 134015484 134015484 1 + C T COAD 134015482 + 134015462 134015502 41 ATGGACGAGAATGAGTTCGTCGCGGTGACCAGTACAAATGC ATGGACGAGAATGAGTTCGTCGTGGTGACCAGTACAAATGC < 41bp 0.784169540738537 0.536243186491778 0.5204026 0.5506312 prediction 0.495852708493519 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134015482 chr10:134015484 nonsynonymous SNV 0.013 4 23 hm5C_associated_SNPs_65973 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:134015461-134015509
64251 chr1 53392982 53392982 1 + G C rs184943760 53392981 + 53392961 53393001 41 GCCGCCCGCGGCCCTGGCTTCGGGCTTCAGGGAGCTCTGGT GCCGCCCGCGGCCCTGGCTTCCGGCTTCAGGGAGCTCTGGT < 41bp 0.747913971480619 0.477047910280006 0.92387056 0.74441665 prediction 0.495827942961238 Functional Loss - SCP2 ENSG00000116171 UTR5 Human protein_coding chr1:53392981 chr1:53392982 . . 0 22 hm5C_associated_SNPs_65975 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:53392980-53393000
64251 chr1 28087051 28087051 1 + A T LUAD 28087047 + 28087027 28087067 41 AAGCAGGCAGCTGCTTTGTCCAAGAGCAAGAAGTCAGAGAA AAGCAGGCAGCTGCTTTGTCCAAGTGCAAGAAGTCAGAGAA < 41bp 0.834644782014595 0.586743127350852 0.8181242 0.71645343 prediction 0.495803309327486 Functional Loss - FAM76A ENSG00000009780 CDS Human protein_coding chr1:28087047 chr1:28087051 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_65981 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:28087044-28087080
64251 chr19 4941939 4941939 1 + G C BLCA 4941938 + 4941918 4941958 41 AGCAGTGTTCCCAGCGAGGACGAGTGGTGAGTGCGGCCCTG AGCAGTGTTCCCAGCGAGGACCAGTGGTGAGTGCGGCCCTG < 41bp 0.747891694670824 0.442182354915982 0.63034487 0.6186556 prediction 0.495783389341648 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4941938 chr19:4941939 . 0.566 3 22 hm5C_associated_SNPs_65982 0 0 4 NOL12 POSTAR2 ENCODE chr19:4941905-4941953
64251 chr19 3530796 3530796 1 + C T COAD 3530794 + 3530774 3530814 41 TGACCTCTGCCTCCAGGTGACGCGGCTCTGTGACCTCTCAG TGACCTCTGCCTCCAGGTGACGTGGCTCTGTGACCTCTCAG < 41bp 0.766429040047382 0.518539880976266 0.26578307 0.26885426 prediction 0.495778318142233 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3530794 chr19:3530796 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_65983 0 0 5 DDX24 POSTAR2 ENCODE chr19:3530788-3530829
64251 chr16 67662336 67662336 1 + T C STAD 67662335 + 67662315 67662355 41 AAGCCTTACGCCTGCAGCCACTGCGATAAGACCTTCCGCCA AAGCCTTACGCCTGCAGCCACCGCGATAAGACCTTCCGCCA < 41bp 0.76925480360329 0.521372829926453 0.13887641 0.346869 prediction 0.495763947353674 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67662335 chr16:67662336 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_65987 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr5 96100942 96100942 1 + C T BRCA 96100940 + 96100920 96100960 41 TTCAGCAGAGTGACAAAGACCTCGATGATGCCTTGGATAAA TTCAGCAGAGTGACAAAGACCTTGATGATGCCTTGGATAAA < 41bp 0.760709254398004 0.512854377525729 0.138488 0.01704958 prediction 0.49570975374455 Functional Loss - CAST ENSG00000153113 CDS Human protein_coding chr5:96100940 chr5:96100942 synonymous SNV . 0 23 hm5C_associated_SNPs_65996 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:96100933-96100968
64251 chr4 95373088 95373088 1 + G C rs147199893 95373084 + 95373064 95373104 41 CGGTGGGGACGGCGCCCTCACCGCGAGTCACTTGTCAGCCC CGGTGGGGACGGCGCCCTCACCGCCAGTCACTTGTCAGCCC < 41bp 0.747847149305027 0.493410521142942 0.9084842 0.8473271 prediction 0.495694298610054 Functional Loss - PDLIM5 ENSG00000163110 UTR5 Human protein_coding chr4:95373084 chr4:95373088 . . 0 25 hm5C_associated_SNPs_66000 0 0 3 DDX3X POSTAR2 ENCODE chr4:95373085-95373147
64251 chr19 50902136 50902136 1 + G T UCEC 50902134 + 50902114 50902154 41 TGGCAAGCGGCGGCCAGGCCCAGGGCCCGGGGTGCCCCCAA TGGCAAGCGGCGGCCAGGCCCATGGCCCGGGGTGCCCCCAA < 41bp 0.895737565440905 0.647896691944355 0.901356 0.2145187 prediction 0.4956817469931 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902134 chr19:50902136 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_66001 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50902120-50902140
64251 chr5 34915948 34915948 1 + A C rs2069465 34915944 + 34915924 34915964 41 GCCGCCAGCTAAGCGGCACGCCACAGCAGAGGAGGTGGAGG GCCGCCAGCTAAGCGGCACGCCACCGCAGAGGAGGTGGAGG < 41bp 0.747833600449849 0.363239358714567 0.06382093 0.04905629 prediction 0.495667200899697 Functional Loss - BRIX1 ENSG00000113460 CDS Human protein_coding chr5:34915944 chr5:34915948 synonymous SNV . 0 25 hm5C_associated_SNPs_66004 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:34915934-34915964
64251 chr11 64083221 64083221 1 + G C THCA 64083220 + 64083200 64083240 41 CCGAGGCTGTGGAGCAGCTGCGAGAAGCTCTGCACGAGGCC CCGAGGCTGTGGAGCAGCTGCCAGAAGCTCTGCACGAGGCC < 41bp 0.863896672627349 0.616083561126441 0.8795851 0.84954226 prediction 0.495626223001816 Functional Loss - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64083220 chr11:64083221 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_66011 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64083194-64083235
64251 chr9 130982481 130982481 1 + G T THCA 130982479 + 130982459 130982499 41 GGCTACATTGGAGTGGTGAACCGGAGCCAGAAGGACATTGA GGCTACATTGGAGTGGTGAACCTGAGCCAGAAGGACATTGA < 41bp 0.747807656023206 0.397526978028682 0.883852 0.28643134 prediction 0.495615312046412 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130982479 chr9:130982481 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_66012 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:130982462-130982493
64251 chr20 13145505 13145505 1 + C T COAD 13145503 + 13145483 13145523 41 ATGATGAGACGAGCTTTGAACTCGAAGATTAAGTTTCCTGG ATGATGAGACGAGCTTTGAACTTGAAGATTAAGTTTCCTGG < 41bp 0.747788002443625 0.465563286442365 0.18344387 0.0582107 prediction 0.495576004887251 Functional Loss - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13145503 chr20:13145505 synonymous SNV . 0 23 hm5C_associated_SNPs_66015 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:13145490-13145510
64251 chr1 29609222 29609222 1 + C T UCEC 29609220 + 29609200 29609240 41 GATTGTGGAGGAGGAGCGGGCGCGGAGGCTGCGGCGGGAGC GATTGTGGAGGAGGAGCGGGCGTGGAGGCTGCGGCGGGAGC < 41bp 0.747787618011062 0.496825753646478 0.87885916 0.80640495 prediction 0.495575236022125 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29609220 chr1:29609222 nonsynonymous SNV 0.274 3 23 hm5C_associated_SNPs_66016 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:29609200-29609255
64251 chr4 56762984 56762984 1 + A C UCEC 56762983 + 56762963 56763003 41 TGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATG TGAAGAATTTGCTGGACTTGCCGAATCAATCTTCAAAAATG < 41bp 0.748449945229094 0.500674130419529 0.3748508 0.15698108 prediction 0.495551629619129 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56762983 chr4:56762984 synonymous SNV . 0 22 hm5C_associated_SNPs_66019 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr4:56762980-56763000
64251 chr12 56481413 56481413 1 + A T HNSC 56481409 + 56481389 56481429 41 GCGATGCTGGGGTCCTGGATCAGAAGACTGCCAGACATGTG GCGATGCTGGGGTCCTGGATCAGATGACTGCCAGACATGTG < 41bp 0.747764519061473 0.446803064096566 0.91682017 0.91967535 prediction 0.495529038122947 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56481409 chr12:56481413 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_66021 0 0 3 BUD13 POSTAR2 ENCODE chr12:56481351-56481435
64251 chr11 62556555 62556555 1 + G A UCEC 62556552 + 62556532 62556572 41 CCACCCTGAATGGCTCCTCCCTGGCCTTATCCCGTCCCTCA CCACCCTGAATGGCTCCTCCCTGACCTTATCCCGTCCCTCA < 41bp 0.749835737265947 0.502088396361442 0.06179169 0.02448672 prediction 0.49549468180901 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62556552 chr11:62556555 nonsynonymous SNV 0.933 0 24 hm5C_associated_SNPs_66026 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62556521-62556559
64251 chr1 25817986 25817986 1 + T C LIHC 25817985 + 25817965 25818005 41 TGCAAGACAAAACACAGCACCTGGAGAACAGCTTAAGTGCA TGCAAGACAAAACACAGCACCCGGAGAACAGCTTAAGTGCA < 41bp 0.774339737108075 0.526618963067844 0.39526808 0.6742074 prediction 0.495441548080463 Functional Loss - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25817985 chr1:25817986 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_66038 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:25817981-25818000
64251 chr17 7318355 7318355 1 + C T LGG 7318353 + 7318333 7318373 41 CTACCAGCCGCTCAAGTACACGCGGCTGCTGGCAGCCAAGG CTACCAGCCGCTCAAGTACACGTGGCTGCTGGCAGCCAAGG < 41bp 0.747707696017109 0.4902166141075 0.28800708 0.3366604 prediction 0.495415392034217 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318353 chr17:7318355 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_66042 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7318320-7318363
64251 chr17 7318356 7318356 1 + G T LUAD 7318353 + 7318333 7318373 41 CTACCAGCCGCTCAAGTACACGCGGCTGCTGGCAGCCAAGG CTACCAGCCGCTCAAGTACACGCTGCTGCTGGCAGCCAAGG < 41bp 0.747707696017109 0.344106915040833 0.28800708 0.06805697 prediction 0.495415392034217 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318353 chr17:7318356 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_66043 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7318320-7318363
64251 chr12 16516792 16516792 1 + G T OV 16516789 + 16516769 16516809 41 GGAATTGGCCTCCTGTATTCCTTGAGTGGTCCCGACCCCTC GGAATTGGCCTCCTGTATTCCTTTAGTGGTCCCGACCCCTC < 41bp 0.747706908746375 0.392827407966592 0.019606948 0.031073153 prediction 0.495413817492749 Functional Loss - MGST1 ENSG00000008394 CDS Human protein_coding chr12:16516789 chr12:16516792 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_66045 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:16516766-16516804
64251 chr17 40716806 40716806 1 + A C LUAD 40716805 + 40716785 40716825 41 CTGGGAAGAGCTCAATAGCTCAGCGACTGAAGGGCCTGGGG CTGGGAAGAGCTCAATAGCTCCGCGACTGAAGGGCCTGGGG < 41bp 0.747704554162152 0.487292490393682 0.49598458 0.21494296 prediction 0.495409108324304 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40716805 chr17:40716806 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_66046 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:40716788-40716824
64251 chr12 106704917 106704917 1 + C T UCEC 106704915 + 106704895 106704935 41 GCCAAGCGATTCTGATTCTTCCCGGTTTTCCGAAAGCATGG GCCAAGCGATTCTGATTCTTCCTGGTTTTCCGAAAGCATGG < 41bp 0.747691394265189 0.47698846353729 0.118575364 0.103827775 prediction 0.495382788530378 Functional Loss - TCP11L2 ENSG00000166046 CDS Human protein_coding chr12:106704915 chr12:106704917 nonsynonymous SNV 0.922 2 23 hm5C_associated_SNPs_66050 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:106704893-106704931
64251 chr2 28634919 28634919 1 + C T rs146012402 28634917 + 28634897 28634937 41 GCCCAGTGTGCAAGATTAGCCCCGAGGAGCGCCGATCGCCC GCCCAGTGTGCAAGATTAGCCCTGAGGAGCGCCGATCGCCC < 41bp 0.747688222630668 0.48607157715396 0.1723586 0.17386925 prediction 0.495376445261336 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28634917 chr2:28634919 synonymous SNV . 0 23 hm5C_associated_SNPs_66051 0 0 3 BUD13 POSTAR2 ENCODE chr2:28634847-28634991
64251 chr9 130566678 130566678 1 + C T rs41306702 130566676 + 130566656 130566696 41 AGCCATGGAACTGTACCTGGCACGGAGTGGGCTGCAGGTAA AGCCATGGAACTGTACCTGGCATGGAGTGGGCTGCAGGTAA < 41bp 0.768391094026557 0.520703514857387 0.3397205 0.44153205 prediction 0.495375158338339 Functional Loss - FPGS ENSG00000136877 CDS Human protein_coding chr9:130566676 chr9:130566678 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_66052 0 0 4 BUD13 POSTAR2 ENCODE chr9:130566671-130566688
64251 chr6 143795941 143795941 1 + C T SKCM 143795939 + 143795919 143795959 41 ATAGGCCTGTGGACTTTCTCCTCGAGACATTACCACTATTA ATAGGCCTGTGGACTTTCTCCTTGAGACATTACCACTATTA < 41bp 0.833609142881471 0.58592330633202 0.905126 0.14482799 prediction 0.495371673098902 Functional Loss - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143795939 chr6:143795941 stopgain 0.978 0 23 hm5C_associated_SNPs_66054 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:143795908-143795947
64251 chr7 6063002 6063002 1 + C T STAD 6063000 + 6062980 6063020 41 CGAAGGCGAAGGGAACATTGCACGTTTCTTGTTCTCTCTGT CGAAGGCGAAGGGAACATTGCATGTTTCTTGTTCTCTCTGT < 41bp 0.757108339224011 0.509427292549247 0.2654727 0.26741397 prediction 0.495362093349528 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063000 chr7:6063002 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_66058 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6062982-6063020
64251 chr19 18497006 18497006 1 + G T LUAD 18497004 + 18496984 18497024 41 CGCAACCTGCACAGCCATGCCCGGGCAAGAACTCAGGACGG CGCAACCTGCACAGCCATGCCCTGGCAAGAACTCAGGACGG < 41bp 0.747677498104711 0.407098837853008 0.91045195 0.24680763 prediction 0.495354996209422 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18497004 chr19:18497006 nonsynonymous SNV 0.000 3 23 hm5C_associated_SNPs_66059 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:18496985-18497006
64251 chr12 550057 550057 1 + C T HNSC 550055 + 550035 550075 41 GTTTACAGATAATGACAAAACGCTATGAGGCATTGGAGCGT GTTTACAGATAATGACAAAACGTTATGAGGCATTGGAGCGT < 41bp 0.747676537828282 0.451229117489066 0.04680705 0.030592203 prediction 0.495353075656564 Functional Loss - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:550055 chr12:550057 synonymous SNV . 0 23 hm5C_associated_SNPs_66060 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:550045-550060
64251 chrX 56591309 56591309 1 + A T UCEC 56591305 + 56591285 56591325 41 CAGAGTTCTGCAACTACCAGCACGACCACAAGCACTGGTAG CAGAGTTCTGCAACTACCAGCACGTCCACAAGCACTGGTAG < 41bp 0.747675791005686 0.432364804676651 0.5417391 0.4454005 prediction 0.495351582011372 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591305 chrX:56591309 nonsynonymous SNV 0.791 0 25 hm5C_associated_SNPs_66061 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:56591292-56591314
64251 chr1 156703202 156703202 1 + G A HNSC 156703199 + 156703179 156703219 41 CCCGCTTCATGGCTCTTGGCCTGGGGTTGATGGTGAAGAGC CCCGCTTCATGGCTCTTGGCCTGAGGTTGATGGTGAAGAGC < 41bp 0.750433986309879 0.502769634212975 0.3289125 0.22099492 prediction 0.495328704193809 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703199 chr1:156703202 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_66063 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:156703190-156703215
64251 chr5 177548892 177548892 1 + G T GBM 177548889 + 177548869 177548909 41 TGCGCTACCAGCGGGAGATCCAGGGAGGGTACATGGACATG TGCGCTACCAGCGGGAGATCCAGTGAGGGTACATGGACATG < 41bp 0.747648675778099 0.347583845645792 0.9155674 0.90632224 prediction 0.495297351556198 Functional Loss - N4BP3 ENSG00000145911 CDS Human protein_coding chr5:177548889 chr5:177548892 stopgain 0.997 0 24 hm5C_associated_SNPs_66067 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:177548885-177548929
64251 chr17 6674068 6674068 1 + C T STAD 6674066 + 6674046 6674086 41 GCTGCTGAAAATCAAACTTCCACGATGGAGAAAGATGTTCG GCTGCTGAAAATCAAACTTCCATGATGGAGAAAGATGTTCG < 41bp 0.747647186886098 0.475865170099274 0.07762113 0.1815736 prediction 0.495294373772196 Functional Loss - XAF1 ENSG00000132530 CDS Human protein_coding chr17:6674066 chr17:6674068 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_66069 0 0 1 DGCR8 POSTAR2 ENCODE chr17:6674051-6674082
64251 chr11 60696173 60696173 1 + G T PAAD 60696170 + 60696150 60696190 41 TCTCACAGGCCTCCACCACACGGGCCGAGCTGGCCTACACG TCTCACAGGCCTCCACCACACGGTCCGAGCTGGCCTACACG < 41bp 0.747636052398614 0.344930234380397 0.89335847 0.3177449 prediction 0.495272104797227 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696170 chr11:60696173 nonsynonymous SNV 0.293 2 24 hm5C_associated_SNPs_66072 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:60696148-60696178
64251 chr11 65735174 65735174 1 + G C rs660118 65735170 + 65735150 65735190 41 AGGAAGGTGGAGCTCCACCGCCGGGGTCCCCGCAGGTGCTG AGGAAGGTGGAGCTCCACCGCCGGCGTCCCCGCAGGTGCTG < 41bp 0.837494190490074 0.589865777507411 0.8260372 0.7724111 prediction 0.495256825965326 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65735170 chr11:65735174 nonsynonymous SNV 0.488 0 25 hm5C_associated_SNPs_66075 0 0 25 BUD13 POSTAR2 ENCODE chr11:65735137-65735221
64251 chr16 29818106 29818106 1 + G T BLCA 29818103 + 29818083 29818123 41 TCCCGGGGGGTGGGCGGCCTCATGAACTCCTTCCCGCCACC TCCCGGGGGGTGGGCGGCCTCATTAACTCCTTCCCGCCACC < 41bp 0.911369597855598 0.663746021083888 0.5840678 0.3064147 prediction 0.495247153543419 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29818103 chr16:29818106 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_66077 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:29817940-29818140
64251 chr16 72131617 72131617 1 + G T UCEC 72131614 + 72131594 72131634 41 GGCACAGCAGCAGATCAGAGCGAGATGGAGGGTCAGAGCGT GGCACAGCAGCAGATCAGAGCGATATGGAGGGTCAGAGCGT < 41bp 0.747616630194869 0.348120241541654 0.8940913 0.6023669 prediction 0.495233260389737 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72131614 chr16:72131617 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_66079 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:72131580-72131627
64251 chr18 72344210 72344210 1 + C T rs114313623 72344208 + 72344188 72344228 41 GCACACGGTAACAGTGTAACCTCGAGGCCAAGACCTGAGCG GCACACGGTAACAGTGTAACCTTGAGGCCAAGACCTGAGCG < 41bp 0.747603510795233 0.490091277639808 0.79715455 0.23622155 prediction 0.495207021590466 Functional Loss - ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72344208 chr18:72344210 nonsynonymous SNV 0.145 0 23 hm5C_associated_SNPs_66082 0 0 1 EIF3H POSTAR2 ENCODE chr18:72344158-72344217
64251 chr1 184023900 184023900 1 + G T READ 184023898 + 184023878 184023918 41 AGTAAACTGTGTAGGATTACCAGAACTCCAGCTCATCTGCC AGTAAACTGTGTAGGATTACCATAACTCCAGCTCATCTGCC < 41bp 0.878347519496318 0.630755931692016 0.50416094 0.14048907 prediction 0.495183175608604 Functional Loss - TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184023898 chr1:184023900 stopgain 0.999 1 23 hm5C_associated_SNPs_66085 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:184023873-184023917
64251 chr12 94072793 94072793 1 + G T LUAD 94072790 + 94072770 94072810 41 GATTCCCTACAGGAGTTTCCCTGGGTCAGGGAGAAGCTGAA GATTCCCTACAGGAGTTTCCCTGTGTCAGGGAGAAGCTGAA < 41bp 0.747587479038638 0.361229833998033 0.37755072 0.18137819 prediction 0.495174958077276 Functional Loss - CRADD ENSG00000169372 CDS Human protein_coding chr12:94072790 chr12:94072793 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_66087 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr12:94072782-94072811
64251 chr2 37475434 37475434 1 + C T CESC 37475432 + 37475412 37475452 41 TGGAAGATATCAGAGGAATGCACGTCAGTCAAAACCCTTTG TGGAAGATATCAGAGGAATGCATGTCAGTCAAAACCCTTTG < 41bp 0.762362587464462 0.514781454411874 0.23886532 0.22544518 prediction 0.495162266105176 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37475432 chr2:37475434 nonsynonymous SNV 0.293 0 23 hm5C_associated_SNPs_66090 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:37475424-37475461
64251 chr3 129225380 129225380 1 + G T UCEC 129225377 + 129225357 129225397 41 GGATGCTGTCCATGCAGTGCCTCGATATAGCTCAAGGTGTG GGATGCTGTCCATGCAGTGCCTCTATATAGCTCAAGGTGTG < 41bp 0.747570197219008 0.393641773877026 0.14540932 0.84125066 prediction 0.495140394438016 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129225377 chr3:129225380 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_66096 0 0 2 DDX24 POSTAR2 ENCODE chr3:129225327-129225391
64251 chr12 58112150 58112150 1 + C T SKCM 58112148 + 58112128 58112168 41 TTCCGTCAGACCGAGACCGGCTCCGTTCGGAGGTGAAGGCT TTCCGTCAGACCGAGACCGGCTTCGTTCGGAGGTGAAGGCT < 41bp 0.74756997129787 0.46532907127268 0.052155018 0.040377498 prediction 0.495139942595741 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58112148 chr12:58112150 synonymous SNV . 0 23 hm5C_associated_SNPs_66097 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:58112140-58112160
64251 chr2 150325219 150325219 1 + C T UCEC 150325217 + 150325197 150325237 41 ACAGGAAACAGTATCTCAGTCACCAAACGCTGTGTCCCACT ACAGGAAACAGTATCTCAGTCATCAAACGCTGTGTCCCACT < 41bp 0.747565325707012 0.457561056685829 0.16541126 0.08156651 prediction 0.495130651414023 Functional Loss - LYPD6 ENSG00000187123 CDS Human protein_coding chr2:150325217 chr2:150325219 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_66098 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:150325202-150325242
64251 chr17 76219684 76219684 1 + G T UCEC 76219682 + 76219662 76219702 41 CAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGCC CAGAGTGGCTGCACCACTTCCATGGTTTATTCCCTGGTGCC < 41bp 0.882074161870358 0.634511509862133 0.9044411 0.3798042 prediction 0.49512530401645 Functional Loss - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76219682 chr17:76219684 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_66100 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76219591-76219873
64251 chr1 230415067 230415067 1 + G C LUAD 230415063 + 230415043 230415083 41 TTGCAGAAATGGGAACAGATCGAGGGCAACTCCAAGCTGAG TTGCAGAAATGGGAACAGATCGAGCGCAACTCCAAGCTGAG < 41bp 0.747547201385774 0.474287929283148 0.92761636 0.8274974 prediction 0.495094402771548 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230415063 chr1:230415067 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_66105 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:230415040-230415080
64251 chr19 36145521 36145521 1 + C T SKCM 36145519 + 36145499 36145539 41 ACCGCTAAAGGAGGCGATATCTCTGTGTGCGAATGGTACCA ACCGCTAAAGGAGGCGATATCTTTGTGTGCGAATGGTACCA < 41bp 0.810304503673635 0.56275904248122 0.1273587 0.061210483 prediction 0.495090922384832 Functional Loss - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36145519 chr19:36145521 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_66107 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:36145480-36145560
64251 chr11 65154560 65154560 1 + A C rs78688868 65154559 + 65154539 65154579 41 CCGGCCCCGCTGAGCGATCCCACCGAAGCAGCGTGTCCTCC CCGGCCCCGCTGAGCGATCCCCCCGAAGCAGCGTGTCCTCC < 41bp 0.747544089428765 0.492349862944786 0.19655576 0.12532178 prediction 0.49508817885753 Functional Loss - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65154559 chr11:65154560 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_66108 0 0 8 BUD13 POSTAR2 ENCODE chr11:65154501-65154568
64251 chr20 55093181 55093181 1 + C T SKCM 55093179 + 55093159 55093199 41 TTCTGGAAAAGCTGGGAAGCCTCCGTGTGGAGCCACAAAGA TTCTGGAAAAGCTGGGAAGCCTTCGTGTGGAGCCACAAAGA < 41bp 0.807898365542936 0.560356635719158 0.13843957 0.036928326 prediction 0.495083459647557 Functional Loss - RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55093179 chr20:55093181 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_66109 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:55093164-55093196
64251 chr19 42728985 42728985 1 + G C LUSC 42728981 + 42728961 42729001 41 AACCAGATCCAATACCAGTGCTGGGACTGCCAGGAGCTGTT AACCAGATCCAATACCAGTGCTGGCACTGCCAGGAGCTGTT < 41bp 0.747526887295428 0.459268212688149 0.23261663 0.1313813 prediction 0.495053774590857 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728981 chr19:42728985 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_66115 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:42728966-42728988
64251 chr19 42728983 42728983 1 + G T SKCM 42728981 + 42728961 42729001 41 AACCAGATCCAATACCAGTGCTGGGACTGCCAGGAGCTGTT AACCAGATCCAATACCAGTGCTTGGACTGCCAGGAGCTGTT < 41bp 0.747526887295428 0.403733247281414 0.23261663 0.11626467 prediction 0.495053774590857 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728981 chr19:42728983 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_66116 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:42728966-42728988
64251 chr15 67482927 67482927 1 + A T rs535477771 67482923 + 67482903 67482943 41 GCTTGGGGAAAATGGCCATGCAGGAGGTGGAGAAAATTGGA GCTTGGGGAAAATGGCCATGCAGGTGGTGGAGAAAATTGGA < 41bp 0.821002076444883 0.573481187900757 0.7583778 0.5572581 prediction 0.495041777088252 Functional Loss - SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67482923 chr15:67482927 . . 0 25 hm5C_associated_SNPs_66118 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr15:67482926-67482975
64251 chr17 61877918 61877918 1 + A C COAD 61877914 + 61877894 61877934 41 AATCTAGAATATGATAGTGACGGAAATCCAATTGCACCTAC AATCTAGAATATGATAGTGACGGACATCCAATTGCACCTAC < 41bp 0.747518498835858 0.364554163250876 0.24849835 0.26610374 prediction 0.495036997671715 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61877914 chr17:61877918 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_66120 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61877853-61877932
64251 chr17 1657747 1657747 1 + C T SKCM 1657745 + 1657725 1657765 41 AGAGCCTGAAAGGCTTCCCCCGCGGAGACAAGCTTTTCGGC AGAGCCTGAAAGGCTTCCCCCGTGGAGACAAGCTTTTCGGC < 41bp 0.759463638477551 0.511945539390697 0.78255624 0.32952705 prediction 0.495036198173709 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657745 chr17:1657747 synonymous SNV . 0 23 hm5C_associated_SNPs_66121 0 0 2 SND1 POSTAR2 ENCODE chr17:1657714-1657755
64251 chr2 27659970 27659970 1 + G T LUAD 27659967 + 27659947 27659987 41 ACTCCTTTGGCATGTGTGCACTGGAGGTGAGGGGACTGGAG ACTCCTTTGGCATGTGTGCACTGTAGGTGAGGGGACTGGAG < 41bp 0.916941613687928 0.669426364948067 0.47608784 0.24620354 prediction 0.495030497479723 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27659967 chr2:27659970 stopgain 1.000 1 24 hm5C_associated_SNPs_66122 0 0 8 DDX24 POSTAR2 ENCODE chr2:27659917-27659973
64251 chr3 141163374 141163374 1 + C T HNSC 141163372 + 141163352 141163392 41 AGCTACAGTGGCTCTGCACCCTCGGTCATTGTACACAGCAG AGCTACAGTGGCTCTGCACCCTTGGTCATTGTACACAGCAG < 41bp 0.775301932670987 0.527792036842781 0.051278263 0.04475698 prediction 0.495019791656411 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141163372 chr3:141163374 nonsynonymous SNV 0.462 3 23 hm5C_associated_SNPs_66126 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:141163348-141163382
64251 chr11 76507266 76507266 1 + C T SKCM 76507264 + 76507244 76507284 41 GGCTCCATGCCGTGCCCAACCTCCGAGACTTGCCCCTGCGC GGCTCCATGCCGTGCCCAACCTTCGAGACTTGCCCCTGCGC < 41bp 0.803516333541644 0.556015476062137 0.4578254 0.4911284 prediction 0.495001714959013 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507264 chr11:76507266 synonymous SNV . 0 23 hm5C_associated_SNPs_66129 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76507119-76507299
64251 chr17 4906119 4906119 1 + G A UCEC 4906116 + 4906096 4906136 41 CAGCGCTGCCATGACCAGCTCACGGGGCTGGACTCGGAGAA CAGCGCTGCCATGACCAGCTCACAGGGCTGGACTCGGAGAA < 41bp 0.752127566010722 0.504637462431322 0.58354616 0.12903085 prediction 0.4949802071588 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4906116 chr17:4906119 synonymous SNV . 0 24 hm5C_associated_SNPs_66131 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4906106-4906128
64251 chr1 40424431 40424431 1 + C T GBM 40424429 + 40424409 40424449 41 GGCCGAGCCTGGGATGCCATCACAGACCCCCTGGTGGGCCT GGCCGAGCCTGGGATGCCATCATAGACCCCCTGGTGGGCCT < 41bp 0.747489032764917 0.488959232026781 0.3419566 0.31319976 prediction 0.494978065529834 Functional Loss - MFSD2A ENSG00000168389 CDS Human protein_coding chr1:40424429 chr1:40424431 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_66132 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:40424406-40424431
64251 chrX 51638243 51638243 1 + C T UCEC 51638241 + 51638221 51638261 41 CCACCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAGAG CCACCTACTAACCAGGCCACCGTAGCTGCTAGTCCCCAGAG < 41bp 0.747475452529525 0.484472164826237 0.6484094 0.18362942 prediction 0.49495090505905 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638241 chrX:51638243 nonsynonymous SNV 0.929 2 23 hm5C_associated_SNPs_66138 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:51638208-51638259
64251 chr10 99211611 99211611 1 + C T UCEC 99211609 + 99211589 99211629 41 TCCTTTGGGGGCAGTGACACCGCTGTTGATGCTGCCTTTGA TCCTTTGGGGGCAGTGACACCGTTGTTGATGCTGCCTTTGA < 41bp 0.779309876414587 0.531838065827413 0.6658275 0.56648374 prediction 0.494943621174347 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211609 chr10:99211611 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_66139 0 0 3 DDX3X POSTAR2 ENCODE chr10:99211596-99211650
64251 chr18 72344503 72344503 1 + G T LUAD 72344500 + 72344480 72344520 41 GCCAGGGGAGTGCCCGTCCTCCGGACTCCGGGCTGCATTCC GCCAGGGGAGTGCCCGTCCTCCGTACTCCGGGCTGCATTCC < 41bp 0.747471556685004 0.382247500445517 0.8362735 0.21144915 prediction 0.494943113370008 Functional Loss - ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72344500 chr18:72344503 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_66140 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr18:72344502-72344521
64251 chr1 31837019 31837019 1 + C T UCEC 31837017 + 31836997 31837037 41 AGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAG AGAAGAAAAAGAAGAAGAAGCATAAGAAGAAGCACAAGGAG < 41bp 0.747470894556091 0.492230092187355 0.26614285 0.22448912 prediction 0.494941789112182 Functional Loss - ZCCHC17 ENSG00000121766 CDS Human protein_coding chr1:31837017 chr1:31837019 synonymous SNV 0.981 0 23 hm5C_associated_SNPs_66141 0 0 8 CPSF6 POSTAR2 ENCODE chr1:31836919-31837038
64251 chr9 131256853 131256853 1 + C T HNSC 131256851 + 131256831 131256871 41 CTCCCTGACATCCTGAAGATCACGGAGGCGAAGCTGGCTGA CTCCCTGACATCCTGAAGATCATGGAGGCGAAGCTGGCTGA < 41bp 0.769542497562169 0.522077954355608 0.82525635 0.56317747 prediction 0.494929086413122 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131256851 chr9:131256853 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_66144 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:131256851-131256919
64251 chr1 222835427 222835427 1 + C T PAAD 222835425 + 222835405 222835445 41 GGACGGGCCTCTACCTCATCCTCGATGGTCAGCTGAGGCAT GGACGGGCCTCTACCTCATCCTTGATGGTCAGCTGAGGCAT < 41bp 0.835244429182493 0.587786179781989 0.40847132 0.20728272 prediction 0.494916498801007 Functional Loss - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222835425 chr1:222835427 stopgain 0.982 0 23 hm5C_associated_SNPs_66147 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:222835398-222835452
64251 chrX 38664412 38664412 1 + C T COAD 38664410 + 38664390 38664430 41 AGGAGCGCACGCCCCCAGTCCCCGACTCGGGAAGCGCCAAT AGGAGCGCACGCCCCCAGTCCCTGACTCGGGAAGCGCCAAT < 41bp 0.772837281394095 0.525405037457428 0.057475924 0.04710251 prediction 0.494864487873332 Functional Loss - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664410 chrX:38664412 synonymous SNV . 0 23 hm5C_associated_SNPs_66156 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:38664397-38664436
64251 chr3 45048925 45048925 1 + A T SARC 45048921 + 45048901 45048941 41 TGCCTTTGCAGATTGGCTATCGGCATGTGGTGGATGCTACT TGCCTTTGCAGATTGGCTATCGGCTTGTGGTGGATGCTACT < 41bp 0.869016733530818 0.621592378570778 0.9338452 0.89912033 prediction 0.49484870992008 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45048921 chr3:45048925 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_66158 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr3:45048911-45048932
64251 chr16 84778731 84778731 1 + C T SKCM 84778729 + 84778709 84778749 41 ACTTGTAACAGCCCCCAGAACTCCACAGACTCTGTCAGTGA ACTTGTAACAGCCCCCAGAACTTCACAGACTCTGTCAGTGA < 41bp 0.823160232591906 0.575746117319129 0.9433513 0.071389735 prediction 0.494828230545554 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778729 chr16:84778731 nonsynonymous SNV 0.245 0 23 hm5C_associated_SNPs_66163 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:84778682-84778741
64251 chr14 23567180 23567180 1 + G T UCEC 23567177 + 23567157 23567197 41 ATCTTTGGGATCAGTGGTTTCGAGGCTGGGCTGAGCAGGAG ATCTTTGGGATCAGTGGTTTCGATGCTGGGCTGAGCAGGAG < 41bp 0.911645288032274 0.664248185061284 0.88905585 0.41425246 prediction 0.49479420594198 Functional Loss - C14orf119 ENSG00000179933 CDS Human protein_coding chr14:23567177 chr14:23567180 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66169 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:23567140-23567180
64251 chr11 34152413 34152413 1 + A C LGG 34152412 + 34152392 34152432 41 AGCTAATTCAGCAGCTCCGTCAACAGAGCGCCCAGAGCCAG AGCTAATTCAGCAGCTCCGTCCACAGAGCGCCCAGAGCCAG < 41bp 0.747396096102 0.487877128750614 0.27882716 0.114423215 prediction 0.494792192204 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34152412 chr11:34152413 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_66170 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:34152361-34152414
64251 chr19 1221302 1221302 1 + G T LUSC 1221299 + 1221279 1221319 41 GGGAAGGGGAGCTACGCCATCCCGGGCGACTGTGGCCCCCC GGGAAGGGGAGCTACGCCATCCCTGGCGACTGTGGCCCCCC < 41bp 0.74738521712016 0.346321136689829 0.4877583 0.23472181 prediction 0.494770434240321 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1221299 chr19:1221302 synonymous SNV . 0 24 hm5C_associated_SNPs_66174 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1221272-1221302
64251 chr16 3077019 3077019 1 + C T UCEC 3077017 + 3076997 3077037 41 CCCTCCCCATCCCAGGAGTGCTCGAGGCCCCACAATGGGCG CCCTCCCCATCCCAGGAGTGCTTGAGGCCCCACAATGGGCG < 41bp 0.813259906104411 0.565881240349313 0.4189493 0.39492524 prediction 0.494757331510197 Functional Loss - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3077017 chr16:3077019 nonsynonymous SNV 0.878 1 23 hm5C_associated_SNPs_66177 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr16:3077009-3077046
64251 chr15 40750789 40750789 1 + C T UCEC 40750787 + 40750767 40750807 41 AGGGTGTGGAGCCAGGCATGCCCGAGAGCCCAGGTCACCTC AGGGTGTGGAGCCAGGCATGCCTGAGAGCCCAGGTCACCTC < 41bp 0.795130684740501 0.547760396303797 0.77363443 0.541295 prediction 0.494740576873409 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40750787 chr15:40750789 synonymous SNV . 0 23 hm5C_associated_SNPs_66179 0 0 1 FXR2 POSTAR2 ENCODE chr15:40750751-40750807
64251 chr17 27066165 27066165 1 + G A UCEC 27066162 + 27066142 27066182 41 AGGTGGCCTGTGGGGCCTCTCACGTGCTGGCCCTGTCCACT AGGTGGCCTGTGGGGCCTCTCACATGCTGGCCCTGTCCACT < 41bp 0.747367478658311 0.497750044158527 0.18092296 0.11018896 prediction 0.494734957316622 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27066162 chr17:27066165 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_66181 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:27066147-27066176
64251 chr11 66272113 66272113 1 + G C LUAD 66272109 + 66272089 66272129 41 AAGTCCACAGGGGATGTGGCCGGAGGGCGGGCCCTGTACGA AAGTCCACAGGGGATGTGGCCGGACGGCGGGCCCTGTACGA < 41bp 0.747356729803009 0.454023757351345 0.91605014 0.8595569 prediction 0.494713459606018 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66272109 chr11:66272113 nonsynonymous SNV 0.483 4 25 hm5C_associated_SNPs_66186 0 0 2 RPS3 POSTAR2 ENCODE chr11:66272082-66272163
64251 chr6 1611094 1611094 1 + G T UCEC 1611091 + 1611071 1611111 41 TCGCTCAACGAGTGCTTCGTCAAGGTGCCGCGCGACGACAA TCGCTCAACGAGTGCTTCGTCAATGTGCCGCGCGACGACAA < 41bp 0.912070063269284 0.664716726733672 0.74607635 0.056552023 prediction 0.494706673071223 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611091 chr6:1611094 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_66187 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:1611060-1611120
64251 chr19 19218738 19218738 1 + C T COAD 19218736 + 19218716 19218756 41 TTTCATGTCTTCATCCGCATCTCGAGAGAAGAGGGGCTGAA TTTCATGTCTTCATCCGCATCTTGAGAGAAGAGGGGCTGAA < 41bp 0.839274762444739 0.591932958431683 0.91669613 0.2430962 prediction 0.494683608026111 Functional Loss - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19218736 chr19:19218738 nonsynonymous SNV 0.973 1 23 hm5C_associated_SNPs_66190 0 0 1 PUM2 POSTAR2 ENCODE chr19:19218701-19218759
64251 chr18 29099832 29099832 1 + G A COAD 29099829 + 29099809 29099849 41 CTCATTTAGTGCGGCAAAAGCGCGCCTGGATCACCGCCCCC CTCATTTAGTGCGGCAAAAGCGCACCTGGATCACCGCCCCC < 41bp 0.76295195482672 0.515627942311957 0.8851248 0.46100387 prediction 0.494648025029526 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29099829 chr18:29099832 nonsynonymous SNV 0.664 1 24 hm5C_associated_SNPs_66195 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr18:29099811-29099860
64251 chr10 35842101 35842101 1 + C T BLCA 35842099 + 35842079 35842119 41 TGCCAGATCCTGAAAGACATCACGGTGGAGGACATGTGAGT TGCCAGATCCTGAAAGACATCATGGTGGAGGACATGTGAGT < 41bp 0.809048548422193 0.561725054494982 0.3071368 0.3263738 prediction 0.494646987854421 Functional Loss - CCNY ENSG00000108100 CDS Human protein_coding chr10:35842099 chr10:35842101 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_66196 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:35842050-35842106
64251 chr1 150463934 150463934 1 + C T OV 150463932 + 150463912 150463952 41 CCAGGAACTTACAGCTGCTGCTCGACCCTTCCGGAGGCTAG CCAGGAACTTACAGCTGCTGCTTGACCCTTCCGGAGGCTAG < 41bp 0.747320304112818 0.466162711893533 0.034692258 0.026209265 prediction 0.494640608225636 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463932 chr1:150463934 stopgain 0.932 0 23 hm5C_associated_SNPs_66199 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:150463906-150463935
64251 chr11 86663440 86663440 1 - T G BLCA 86663444 - 86663424 86663464 41 ATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAA ATCCCCATTGGCCCATGCGGCGGCCTGTGTCTTTCAGTCAA < 41bp 0.747315837603527 0.344895102767657 0.24239969 0.15138805 prediction 0.494631675207054 Functional Loss - FZD4 ENSG00000174804 CDS Human protein_coding chr11:86663444 chr11:86663440 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_66201 0 0 1 U2AF1 POSTAR2 ENCODE chr11:86663426-86663516
64251 chr14 99959201 99959201 1 + C T UCEC 99959199 + 99959179 99959219 41 GTTCATCTTTGATGTGGGCACACGTTTGGGGCTGTATCCTG GTTCATCTTTGATGTGGGCACATGTTTGGGGCTGTATCCTG < 41bp 0.795163837864207 0.547858023881443 0.6191345 0.8733771 prediction 0.494611627965529 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99959199 chr14:99959201 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_66204 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:99959179-99959206
64251 chr2 179404292 179404292 1 + C T CESC 179404290 + 179404270 179404310 41 GCTTTAGGCACTTCTCGTCTCTCGAGGATGTAGCCTAAGAT GCTTTAGGCACTTCTCGTCTCTTGAGGATGTAGCCTAAGAT < 41bp 0.781123020698893 0.533832009706593 0.47613966 0.15572104 prediction 0.4945820219846 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179404290 chr2:179404292 nonsynonymous SNV 0.983 3 23 hm5C_associated_SNPs_66206 3 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:179404260-179404300
64251 chr14 74040127 74040127 1 + G C UCEC 74040126 + 74040106 74040146 41 CCTGGGATTGTGGACATGTTCGGAACTGGAGGTGGCCTGCT CCTGGGATTGTGGACATGTTCCGAACTGGAGGTGGCCTGCT < 41bp 0.862071109645528 0.614789547807651 0.91015804 0.23737988 prediction 0.494563123675754 Functional Loss - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74040126 chr14:74040127 nonsynonymous SNV 0.015 4 22 hm5C_associated_SNPs_66211 0 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr14:74040109-74040127
64251 chr1 151262977 151262977 1 + C T rs61740560 151262975 + 151262955 151262995 41 AGAAACATGTCCAGGTCCGGCACGGCTTGCAGCTTGGGGCC AGAAACATGTCCAGGTCCGGCATGGCTTGCAGCTTGGGGCC < 41bp 0.774599146905196 0.52732937525581 0.29346722 0.26219386 prediction 0.494539543298772 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151262975 chr1:151262977 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_66214 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:151262958-151262981
64251 chr19 10781723 10781723 1 + A T UCS 10781719 + 10781699 10781739 41 ATTCTTCCGTTTATCCAACACAAGAGGAGCTGGAGGCAGTC ATTCTTCCGTTTATCCAACACAAGTGGAGCTGGAGGCAGTC < 41bp 0.747265697280117 0.434872816492922 0.20087028 0.093244284 prediction 0.494531394560234 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10781719 chr19:10781723 nonsynonymous SNV 0.983 4 25 hm5C_associated_SNPs_66215 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10781655-10781733
64251 chr2 220111502 220111502 1 + C T UCEC 220111500 + 220111480 220111520 41 AGCGAGAAGCCGACATGCATCGCCTCTTCAATCACCCCAAC AGCGAGAAGCCGACATGCATCGTCTCTTCAATCACCCCAAC < 41bp 0.79092622469929 0.543660889864764 0.024522275 0.012557179 prediction 0.494530669669052 Functional Loss - STK16 ENSG00000115661 CDS Human protein_coding chr2:220111500 chr2:220111502 synonymous SNV . 0 23 hm5C_associated_SNPs_66216 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:220111501-220111528
64251 chr2 234363496 234363496 1 + C T UCEC 234363494 + 234363474 234363514 41 CCCTGGACTTTAACAACAAGCGCGATGAGCACCCAGAGAAG CCCTGGACTTTAACAACAAGCGTGATGAGCACCCAGAGAAG < 41bp 0.747263166123993 0.470224474478123 0.15431821 0.2447513 prediction 0.494526332247986 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234363494 chr2:234363496 synonymous SNV . 0 23 hm5C_associated_SNPs_66217 0 0 3 DDX24 POSTAR2 ENCODE chr2:234363472-234363520
64251 chr6 31940512 31940512 1 + G T LGG 31940510 + 31940490 31940530 41 GTGTACAGCCTTGTGCCTGACAGGACCGTGGCCGACCGGCA GTGTACAGCCTTGTGCCTGACATGACCGTGGCCGACCGGCA < 41bp 0.818430535958289 0.571168246871095 0.8483014 0.28755605 prediction 0.494524578174389 Functional Loss - STK19 ENSG00000204344 CDS Human protein_coding chr6:31940510 chr6:31940512 nonsynonymous SNV 0.844 4 23 hm5C_associated_SNPs_66218 0 0 3 GRWD1 POSTAR2 ENCODE chr6:31940487-31940544
64251 chr10 102738982 102738982 1 + T C LGG 102738981 + 102738961 102739001 41 TGCAGCCTGGATGCTGAAACCTCAAGCCGTACACACTTCTA TGCAGCCTGGATGCTGAAACCCCAAGCCGTACACACTTCTA < 41bp 0.777410845526274 0.530153023377249 0.3608331 0.8193558 prediction 0.494515644298049 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738981 chr10:102738982 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_66219 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:102738960-102738983
64251 chr10 127434402 127434402 1 + C T rs369286039 127434400 + 127434380 127434420 41 GCCGCCCTTTTATTATGTAACACGGGAAGGCTCATGCGGAT GCCGCCCTTTTATTATGTAACATGGGAAGGCTCATGCGGAT < 41bp 0.799153809104933 0.551897478708965 0.23002854 0.37600553 prediction 0.494512660791937 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127434400 chr10:127434402 nonsynonymous SNV 0.910 1 23 hm5C_associated_SNPs_66222 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:127434363-127434404
64251 chr5 153433114 153433114 1 + G T LAML 153433112 + 153433092 153433132 41 GCTCTCTGAATGAACAAGGCCAGGAAATAGCAGTTCAGGTT GCTCTCTGAATGAACAAGGCCATGAAATAGCAGTTCAGGTT < 41bp 0.747252948177914 0.42513496964473 0.8748758 0.08380389 prediction 0.494505896355828 Functional Loss - MFAP3 ENSG00000037749 CDS Human protein_coding chr5:153433112 chr5:153433114 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_66223 0 0 4 RBM15 POSTAR2 GSE78030,GSM2064710 chr5:153433100-153433120
64251 chr17 16221220 16221220 1 + A C STAD 16221219 + 16221199 16221239 41 AGCAAAGAAGTGGCACAGGCCAAGGTGAGGATTGTAAATTC AGCAAAGAAGTGGCACAGGCCCAGGTGAGGATTGTAAATTC < 41bp 0.764791469978391 0.517544169335408 0.25728458 0.2741096 prediction 0.494494601285966 Functional Loss - PIGL ENSG00000108474 CDS Human protein_coding chr17:16221219 chr17:16221220 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_66226 0 0 5 GRWD1 POSTAR2 ENCODE chr17:16221109-16221227
64251 chr19 47856689 47856689 1 + C T GBM 47856687 + 47856667 47856707 41 CGGAGAGAGTGGCTGAGTTCCGCCGAGCCCTGTTGCACTAC CGGAGAGAGTGGCTGAGTTCCGTCGAGCCCTGTTGCACTAC < 41bp 0.747211550423117 0.484585077869571 0.40722635 0.18583527 prediction 0.494423100846235 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856687 chr19:47856689 synonymous SNV . 0 23 hm5C_associated_SNPs_66239 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47856660-47856692
64251 chr8 109489054 109489054 1 + G T COAD 109489051 + 109489031 109489071 41 ACTTGAAAACCTCGAACTTTCAAGAAAGTATTTTGCACAGG ACTTGAAAACCTCGAACTTTCAATAAAGTATTTTGCACAGG < 41bp 0.891905392339618 0.644718785046137 0.6596403 0.1680091 prediction 0.494373214586962 Functional Loss - EMC2 ENSG00000104412 CDS Human protein_coding chr8:109489051 chr8:109489054 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66247 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:109489041-109489069
64251 chr21 38862599 38862599 1 + C T UCEC 38862597 + 38862577 38862617 41 AGGGGTCTCTTTGAACCTAACACGAAAGTTTGCGCAACAGA AGGGGTCTCTTTGAACCTAACATGAAAGTTTGCGCAACAGA < 41bp 0.747179628143316 0.459650668013984 0.08629382 0.14242747 prediction 0.494359256286633 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38862597 chr21:38862599 stopgain 1.000 1 23 hm5C_associated_SNPs_66249 1 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:38862545-38862599
64251 chr16 677518 677518 1 + G C LUAD 677517 + 677497 677537 41 TACTCCCTGGCCAGCGGGGCCGGGGGCGGCGGCAGCAAGGG TACTCCCTGGCCAGCGGGGCCCGGGGCGGCGGCAGCAAGGG < 41bp 0.854730873945656 0.607552593643879 0.91548365 0.78424 prediction 0.494356560603552 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:677517 chr16:677518 nonsynonymous SNV 0.005 3 22 hm5C_associated_SNPs_66251 0 0 1 TBRG4 POSTAR2 ENCODE chr16:677496-677538
64251 chr9 133333898 133333898 1 + G A COAD 133333895 + 133333875 133333915 41 CTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAA CTCCTGGGCACCTCTCTTGCCAGACCCTGCATCGCCCGCAA < 41bp 0.75785140031083 0.510676046033608 0.8075719 0.45010054 prediction 0.494350708554444 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133333895 chr9:133333898 synonymous SNV . 0 24 hm5C_associated_SNPs_66253 0 0 2 PPIG POSTAR2 ENCODE chr9:133333826-133333907
64251 chr2 73453360 73453360 1 + A C rs74567063 73453356 + 73453336 73453376 41 CCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCCAGGGCCT CCACTCTAGGGTTTGAGGGGCTGGCATCAGGGCCAGGGCCT < 41bp 0.747167698945775 0.420731538825954 0.4430463 0.25819063 prediction 0.494335397891551 Functional Loss - SMYD5 ENSG00000135632 UTR3 Human protein_coding chr2:73453356 chr2:73453360 . . 0 25 hm5C_associated_SNPs_66256 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:73453347-73453375
64251 chr13 111920008 111920008 1 + C T rs376914209 111920006 + 111919986 111920026 41 CCTTCTGCAGTGAATGTCCTCACGGAACACAGGTGCGCTTG CCTTCTGCAGTGAATGTCCTCATGGAACACAGGTGCGCTTG < 41bp 0.772887201374892 0.525730798269057 0.5563583 0.21291056 prediction 0.49431280621167 Functional Loss - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111920006 chr13:111920008 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_66259 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:111919973-111920015
64251 chr9 133748310 133748310 1 + T C COAD 133748309 + 133748289 133748329 41 TCATGACCTACGGGAACCTCCTGGACTACCTGAGGGAGTGC TCATGACCTACGGGAACCTCCCGGACTACCTGAGGGAGTGC < 41bp 0.769262960879216 0.522114209896127 0.21348056 0.2494381 prediction 0.494297501966178 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133748309 chr9:133748310 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_66261 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr9:133748287-133748311
64251 chr16 15123878 15123878 1 + C T CESC 15123876 + 15123856 15123896 41 ATGGATCTGGAAGCTGAGGGCACGTGTTTGCGGTTCAGCCC ATGGATCTGGAAGCTGAGGGCATGTGTTTGCGGTTCAGCCC < 41bp 0.747141795723663 0.485013468539408 0.09798515 0.11096713 prediction 0.494283591447326 Functional Loss - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15123876 chr16:15123878 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_66262 0 0 4 FMR1 POSTAR2 ENCODE chr16:15123807-15123900
64251 chr12 124156647 124156647 1 + G T COAD 124156645 + 124156625 124156665 41 TGGAGTGCTGAACAATGAGACGGAAGACTGGAGCGTGACTG TGGAGTGCTGAACAATGAGACGTAAGACTGGAGCGTGACTG < 41bp 0.747133856625123 0.39641232282854 0.13148803 0.052432477 prediction 0.494267713250246 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124156645 chr12:124156647 stopgain 0.015 0 23 hm5C_associated_SNPs_66265 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:124156611-124156663
64251 chr3 14180779 14180779 1 + C T UCEC 14180777 + 14180757 14180797 41 CATGGGCCTCAACCTTATGACACGGATCCTCTACACCTTGG CATGGGCCTCAACCTTATGACATGGATCCTCTACACCTTGG < 41bp 0.785553353991746 0.538431139202838 0.28719318 0.30762178 prediction 0.494244429577816 Functional Loss - TMEM43 ENSG00000170876;ENSG00000268279 CDS Human other chr3:14180777 chr3:14180779 nonsynonymous SNV 0.979 4 23 hm5C_associated_SNPs_66270 0 0 2 PPIG POSTAR2 ENCODE chr3:14180674-14180797
64251 chrX 129146962 129146962 1 + C T HNSC 129146960 + 129146940 129146980 41 AGTTGGAAGTGGCAGCAATGCCCGGGGGGCAGACCCAGATG AGTTGGAAGTGGCAGCAATGCCTGGGGGGCAGACCCAGATG < 41bp 0.767791522415323 0.520673061963014 0.8039861 0.5599946 prediction 0.494236920904618 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129146960 chrX:129146962 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_66271 0 0 1 EIF3H POSTAR2 ENCODE chrX:129146925-129147004
64251 chr12 100613887 100613887 1 + C T LUSC 100613885 + 100613865 100613905 41 CTCAGAAGTTCGATGTCTTACTCCAACAGATTATGATGTTT CTCAGAAGTTCGATGTCTTACTTCAACAGATTATGATGTTT < 41bp 0.747111513927192 0.44449724704722 0.9470413 0.10941082 prediction 0.494223027854384 Functional Loss - ACTR6 ENSG00000075089 CDS Human protein_coding chr12:100613885 chr12:100613887 nonsynonymous SNV 0.964 4 23 hm5C_associated_SNPs_66275 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:100613849-100613892
64251 chr5 180657831 180657831 1 + G T UCEC 180657829 + 180657809 180657849 41 CAAGGAGGAGAGGCGAGTGACAGAACTGAAGGTGGGTGAAT CAAGGAGGAGAGGCGAGTGACATAACTGAAGGTGGGTGAAT < 41bp 0.747108351923529 0.416346165044932 0.41987538 0.28998065 prediction 0.494216703847058 Functional Loss - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180657829 chr5:180657831 stopgain 0.994 1 23 hm5C_associated_SNPs_66276 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr5:180657816-180657836
64251 chr20 18462387 18462387 1 + T C SKCM 18462386 + 18462366 18462406 41 GTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCA GTGTAGATGGACACATGAAACCGTACAGGGCAGTCAATCCA < 41bp 0.770727183816504 0.523619679526639 0.11675498 0.041739136 prediction 0.494215008579731 Functional Loss - POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462386 chr20:18462387 nonsynonymous SNV 0.983 2 22 hm5C_associated_SNPs_66277 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:18462307-18462390
64251 chr7 128481572 128481572 1 + C T SKCM 128481570 + 128481550 128481590 41 GTGGACAAGCCCGCTGAGTTCACCATTGATGCTCGTGCAGC GTGGACAAGCCCGCTGAGTTCATCATTGATGCTCGTGCAGC < 41bp 0.747102774272494 0.479369996762526 0.60061723 0.32504347 prediction 0.494205548544989 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128481570 chr7:128481572 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_66279 0 0 2 LIN28B POSTAR2 ENCODE chr7:128481558-128481620
64251 chr1 40506454 40506454 1 + A C rs145869294 40506450 + 40506430 40506470 41 GGAGAGCGGCTGATCGCAGTCCGGAGGTGAGGCGGAACTCT GGAGAGCGGCTGATCGCAGTCCGGCGGTGAGGCGGAACTCT < 41bp 0.806538606418695 0.559437071317268 0.9214785 0.9125407 prediction 0.494203070202854 Functional Loss - CAP1 ENSG00000131236 UTR5 Human protein_coding chr1:40506450 chr1:40506454 . . 0 25 hm5C_associated_SNPs_66280 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:40506440-40506460
64251 chr10 104182582 104182582 1 + C T BLCA 104182580 + 104182560 104182600 41 GGACATTGGCCGAGTACTGCCCCGTGCTGCGTTCGCTGCGG GGACATTGGCCGAGTACTGCCCTGTGCTGCGTTCGCTGCGG < 41bp 0.750933179506233 0.503862153403489 0.3433553 0.2937592 prediction 0.494142052205487 Functional Loss - FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104182580 chr10:104182582 synonymous SNV . 0 23 hm5C_associated_SNPs_66285 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104182563-104182636
64251 chr1 93698031 93698031 1 + G T UCEC 93698028 + 93698008 93698048 41 AGATAAAAAATCACAGTCTTCAAGAGACTTCTGAGCAAAAC AGATAAAAAATCACAGTCTTCAATAGACTTCTGAGCAAAAC < 41bp 0.74705216443375 0.385642136220278 0.67762864 0.21337968 prediction 0.494104328867499 Functional Loss - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93698028 chr1:93698031 stopgain 0.946 0 24 hm5C_associated_SNPs_66288 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:93698028-93698048
64251 chr3 45637103 45637103 1 + C T BLCA 45637101 + 45637081 45637121 41 GCAGGTCTTCTGAGGGTAGCCTCGGTGGTCAGAATAGTGGC GCAGGTCTTCTGAGGGTAGCCTTGGTGGTCAGAATAGTGGC < 41bp 0.788450717205114 0.541399093987186 0.5844902 0.32148108 prediction 0.494103246435856 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637101 chr3:45637103 synonymous SNV . 0 23 hm5C_associated_SNPs_66289 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:45637080-45637120
64251 chr16 29819011 29819011 1 + C T LUSC 29819009 + 29818989 29819029 41 AACCGACACAAGCTGTCGCACTCGGACGAGAAGCCCTACCA AACCGACACAAGCTGTCGCACTTGGACGAGAAGCCCTACCA < 41bp 0.753664215086494 0.506613657512452 0.047728956 0.09504408 prediction 0.494101115148085 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819009 chr16:29819011 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_66290 0 0 37 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:29818903-29819092
64251 chr17 4858863 4858863 1 + G T BLCA 4858860 + 4858840 4858880 41 GGCACATCACTGGGGAGAAGCTCGGAGAGCTGTATAAGAGC GGCACATCACTGGGGAGAAGCTCTGAGAGCTGTATAAGAGC < 41bp 0.747047953880262 0.349362402902616 0.5417289 0.36330253 prediction 0.494095907760524 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858860 chr17:4858863 stopgain 0.493 1 24 hm5C_associated_SNPs_66292 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4858844-4858868
64251 chr4 1244682 1244682 1 + A C rs11554784 1244681 + 1244661 1244701 41 ACATAAGGCTTTGGGTCCTGCAGGTGGGGCTGCCATGAGCA ACATAAGGCTTTGGGTCCTGCCGGTGGGGCTGCCATGAGCA < 41bp 0.75117929184037 0.504133817860497 0.42559242 0.15385538 prediction 0.494090947959745 Functional Loss - CTBP1-AS2 ENSG00000196810;ENSG00000196810 ncRNA_exonic;splicing Human other chr4:1244681 chr4:1244682 . . 0 22 hm5C_associated_SNPs_66293 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:1244668-1244697
64251 chr3 39436027 39436027 1 + A C UCEC 39436023 + 39436003 39436043 41 CTCATATGCAGCTTTATCCACTGAAGTTTCAATGGATTGGC CTCATATGCAGCTTTATCCACTGACGTTTCAATGGATTGGC < 41bp 0.747034582222101 0.333838424869029 0.10614371 0.13646272 prediction 0.494069164444201 Functional Loss - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39436023 chr3:39436027 nonsynonymous SNV 0.920 1 25 hm5C_associated_SNPs_66296 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:39435960-39436052
64251 chr12 7310207 7310207 1 + C T SKCM 7310205 + 7310185 7310225 41 CGTCTCAGGGGCCGGCGGGCCTCCAGGGGCCTCCAGTGACC CGTCTCAGGGGCCGGCGGGCCTTCAGGGGCCTCCAGTGACC < 41bp 0.833562382890221 0.586528090290129 0.9524318 0.4056218 prediction 0.494068585200183 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7310205 chr12:7310207 nonsynonymous SNV 0.098 0 23 hm5C_associated_SNPs_66297 0 0 5 DDX6 POSTAR2 ENCODE chr12:7310189-7310235
64251 chr1 36557280 36557280 1 + T C COAD 36557279 + 36557259 36557299 41 GGTGCTGGAGTAGTCACTGTCTTCAAGAAGCTCCTGAACCC GGTGCTGGAGTAGTCACTGTCCTCAAGAAGCTCCTGAACCC < 41bp 0.788127482492158 0.541099592269706 0.13109854 0.112917304 prediction 0.494055780444903 Functional Loss - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36557279 chr1:36557280 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_66299 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:36557260-36557280
64251 chr20 48600729 48600729 1 + C T UCEC 48600727 + 48600707 48600747 41 TGAGGCCAAGGATCTCCAGGCTCGAAAGGCCTTCAACTGCA TGAGGCCAAGGATCTCCAGGCTTGAAAGGCCTTCAACTGCA < 41bp 0.816701729092138 0.569678898211161 0.21850401 0.18468344 prediction 0.494045661761954 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600727 chr20:48600729 stopgain 0.976 1 23 hm5C_associated_SNPs_66301 0 0 1 IGF2BP1 POSTAR2 ENCODE chr20:48600693-48600749
64251 chr12 7044722 7044722 1 + C T BLCA 7044720 + 7044700 7044740 41 TTTTCTACAGCAGGAACTCCCTCGGCCACAGTCTCCCTCCG TTTTCTACAGCAGGAACTCCCTTGGCCACAGTCTCCCTCCG < 41bp 0.747017595078996 0.48246220368257 0.8426682 0.59385085 prediction 0.494035190157992 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7044720 chr12:7044722 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_66305 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:7044710-7044750
64251 chr19 54080852 54080852 1 + G T UCEC 54080849 + 54080829 54080869 41 GGTTCGAGCCTCGTTAAGCACGAGAGGATACATACGGGCGA GGTTCGAGCCTCGTTAAGCACGATAGGATACATACGGGCGA < 41bp 0.909745059892866 0.6627296856527 0.8831071 0.53250325 prediction 0.49403074848033 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080849 chr19:54080852 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_66306 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:54080840-54080860
64251 chr19 6772918 6772918 1 + G A CESC 6772915 + 6772895 6772935 41 ATGGGGCTCAGGTGTGTGAACTGGCCCAGGCCCTCCGGGAT ATGGGGCTCAGGTGTGTGAACTGACCCAGGCCCTCCGGGAT < 41bp 0.751315753135293 0.504302083169291 0.49377126 0.21430454 prediction 0.494027339932003 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6772915 chr19:6772918 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_66307 0 0 1 DDX3X POSTAR2 ENCODE chr19:6772842-6772921
64251 chr1 227149164 227149164 1 + C T rs150541057 227149162 + 227149142 227149182 41 CCCAGGCGGCCGTGGAAACCCACCTGCAGCACTTGGGCATC CCCAGGCGGCCGTGGAAACCCATCTGCAGCACTTGGGCATC < 41bp 0.795408069912844 0.548406002367604 0.21152732 0.35735807 prediction 0.49400413509048 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227149162 chr1:227149164 synonymous SNV . 0 23 hm5C_associated_SNPs_66310 1 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:227149156-227149194
64251 chrX 54841822 54841822 1 + G C KIRC 54841818 + 54841798 54841838 41 CGAATGGGCATTGGGCTCGGCTCGGAGAATGCTGCCGGGCC CGAATGGGCATTGGGCTCGGCTCGCAGAATGCTGCCGGGCC < 41bp 0.746997052441641 0.464693198193005 0.38095796 0.18939427 prediction 0.493994104883283 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841818 chrX:54841822 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_66311 0 0 5 FMR1 POSTAR2 ENCODE chrX:54841808-54841852
64251 chr15 68473620 68473620 1 + T C KIRC 68473619 + 68473599 68473639 41 CTTCCTGCTGTAGACACAAGCTACATTAATACCTCCCTCAT CTTCCTGCTGTAGACACAAGCCACATTAATACCTCCCTCAT < 41bp 0.746988156304629 0.480351209115429 0.08550346 0.038802266 prediction 0.493976312609259 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68473619 chr15:68473620 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_66313 0 0 10 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr15:68473600-68473620
64251 chr3 58486802 58486802 1 + C T BLCA 58486800 + 58486780 58486820 41 CTTCCCCACAGCTCGAGACCCTCAAGGCAATTACTTTATTG CTTCCCCACAGCTCGAGACCCTTAAGGCAATTACTTTATTG < 41bp 0.819474464035618 0.572499365588313 0.47659844 0.28580618 prediction 0.493950196894611 Functional Loss - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58486800 chr3:58486802 stopgain 1.000 1 23 hm5C_associated_SNPs_66317 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:58486778-58486804
64251 chr1 92495747 92495747 1 + C T CESC 92495745 + 92495725 92495765 41 TCTGCGCCTCCATCCACCTGCTCAAACTTTTGTGGAGCCTC TCTGCGCCTCCATCCACCTGCTTAAACTTTTGTGGAGCCTC < 41bp 0.746974820945296 0.488827102438195 0.042257488 0.04685521 prediction 0.493949641890592 Functional Loss - EPHX4 ENSG00000172031 CDS Human protein_coding chr1:92495745 chr1:92495747 synonymous SNV . 0 23 hm5C_associated_SNPs_66318 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:92495712-92495750
64251 chr4 54294260 54294260 1 + C T HNSC 54294258 + 54294238 54294278 41 CAAACCACCTCCGTTTTTCCCTCCAGGAGCTCCTCCCACTC CAAACCACCTCCGTTTTTCCCTTCAGGAGCTCCTCCCACTC < 41bp 0.83054812544158 0.583577601353254 0.9546377 0.043992817 prediction 0.493941048176652 Functional Loss - FIP1L1 ENSG00000145216 CDS Human protein_coding chr4:54294258 chr4:54294260 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_66319 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:54294240-54294260
64251 chr19 34291394 34291394 1 + C T CESC 34291392 + 34291372 34291412 41 AAGGAGCGGCCGAGCGGGTCCTCGCTTCACACACACGGCAG AAGGAGCGGCCGAGCGGGTCCTTGCTTCACACACACGGCAG < 41bp 0.77789054576883 0.530921207405728 0.035134137 0.047976494 prediction 0.493938676726203 Functional Loss - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34291392 chr19:34291394 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_66320 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34291383-34291408
64251 chr1 32796425 32796425 1 + G T LUAD 32796422 + 32796402 32796442 41 TTAACCTGCCTATGCTGATGCTGGGAGGCGGTGGTTACACC TTAACCTGCCTATGCTGATGCTGTGAGGCGGTGGTTACACC < 41bp 0.746965607777753 0.352160880909272 0.81427884 0.45863202 prediction 0.493931215555506 Functional Loss - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32796422 chr1:32796425 stopgain 1.000 1 24 hm5C_associated_SNPs_66321 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32796397-32796434
64251 chr2 24929991 24929991 1 + C T SKCM 24929989 + 24929969 24930009 41 ATGAATGAAGGACCCAATAACTCCGTTGGCTTCTCTGCCAG ATGAATGAAGGACCCAATAACTTCGTTGGCTTCTCTGCCAG < 41bp 0.746954793793614 0.455759377376616 0.28845862 0.16034177 prediction 0.493909587587228 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24929989 chr2:24929991 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_66326 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:24929971-24929997
64251 chr6 43412049 43412049 1 + G A SKCM 43412046 + 43412026 43412066 41 CTTACTGGAAGGCCGTGGGCCAGGGCTTGGCCTTAGCCATC CTTACTGGAAGGCCGTGGGCCAGAGCTTGGCCTTAGCCATC < 41bp 0.753786645180348 0.506832093492006 0.84099054 0.33524072 prediction 0.493909103376684 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43412046 chr6:43412049 nonsynonymous SNV 0.335 0 24 hm5C_associated_SNPs_66327 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43411992-43412050
64251 chr21 45107563 45107563 1 + G T BLCA 45107561 + 45107541 45107581 41 GGGAGCCCGAGGCCTCTGGGCTGAAAGCCCTGAAGGCACGT GGGAGCCCGAGGCCTCTGGGCTTAAAGCCCTGAAGGCACGT < 41bp 0.746950814559722 0.39747791379379 0.2544173 0.24321803 prediction 0.493901629119445 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107561 chr21:45107563 synonymous SNV . 0 23 hm5C_associated_SNPs_66329 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr21:45107562-45107563
64251 chr7 73969799 73969799 1 + G T LUSC 73969796 + 73969776 73969816 41 TCCGGGGACCCTCTGGTGGACGAGAGCCTGAAGAGACAGGG TCCGGGGACCCTCTGGTGGACGATAGCCTGAAGAGACAGGG < 41bp 0.74694128631174 0.349865612378892 0.4239617 0.22253594 prediction 0.49388257262348 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73969796 chr7:73969799 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_66333 0 0 1 PPIG POSTAR2 ENCODE chr7:73969764-73969807
64251 chr19 19790800 19790800 1 + A T HNSC 19790796 + 19790776 19790816 41 AGCACATGAAAGAGCTCACACTGGAGAAAGACCTTATGAAT AGCACATGAAAGAGCTCACACTGGTGAAAGACCTTATGAAT < 41bp 0.870399719907576 0.623481446726037 0.13696733 0.10477805 prediction 0.493836546363078 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790796 chr19:19790800 synonymous SNV . 0 25 hm5C_associated_SNPs_66342 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19790764-19790803
64251 chr20 58519187 58519187 1 + C T rs142191607 58519185 + 58519165 58519205 41 CAAGACGCAAAAGGAATCCACTCGGTTCCAGGTGTCAGGGG CAAGACGCAAAAGGAATCCACTTGGTTCCAGGTGTCAGGGG < 41bp 0.761827415611025 0.514911790884373 0.27232546 0.32916284 prediction 0.493831249453303 Functional Loss - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519185 chr20:58519187 synonymous SNV . 0 23 hm5C_associated_SNPs_66343 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:58519179-58519200
64251 chr6 126342315 126342315 1 + A T SKCM 126342311 + 126342291 126342331 41 CTGTTCTTTCTTCAGATACACTGAAGAGATGGTGCCTTGGC CTGTTCTTTCTTCAGATACACTGATGAGATGGTGCCTTGGC < 41bp 0.746914838854541 0.428074597166804 0.10919982 0.1850495 prediction 0.493829677709082 Functional Loss - TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126342311 chr6:126342315 nonsynonymous SNV 0.975 2 25 hm5C_associated_SNPs_66344 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704218 chr6:126342300-126342320
64251 chr8 23112792 23112792 1 + G T UCEC 23112790 + 23112770 23112810 41 AGGAGGTGTATCGTCTGTATCAGAACTCGCCCCTCTCCTCC AGGAGGTGTATCGTCTGTATCATAACTCGCCCCTCTCCTCC < 41bp 0.897188992202145 0.650274455445015 0.9379941 0.25349727 prediction 0.49382907351426 Functional Loss - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112790 chr8:23112792 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_66345 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:23112780-23112825
64251 chr20 57598640 57598640 1 + G C LAML 57598639 + 57598619 57598659 41 TTAGGAGCTCTCTTTCAACCCGACAGTTTTGTCCATGGTAT TTAGGAGCTCTCTTTCAACCCCACAGTTTTGTCCATGGTAT < 41bp 0.746908967780117 0.436555935062277 0.048223644 0.050563365 prediction 0.493817935560234 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598639 chr20:57598640 nonsynonymous SNV 0.303 4 22 hm5C_associated_SNPs_66347 0 0 2 GRWD1 POSTAR2 ENCODE chr20:57598618-57598655
64251 chr16 82069153 82069153 1 + G A COAD 82069150 + 82069130 82069170 41 TGTGGAGCTGGATGGTCTGCCTGGCAGGCCTCTGTGCAGTC TGTGGAGCTGGATGGTCTGCCTGACAGGCCTCTGTGCAGTC < 41bp 0.764401857227718 0.517493453636268 0.042473853 0.023105681 prediction 0.493816807182899 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82069150 chr16:82069153 nonsynonymous SNV 0.206 1 24 hm5C_associated_SNPs_66348 0 0 1 RPS3 POSTAR2 ENCODE chr16:82069117-82069206
64251 chr7 76026960 76026960 1 - G A LUSC 76026962 - 76026942 76026982 41 AACGCCTTCTTCGGCTATGGCACCGGACACATCCTGCTGGA AACGCCTTCTTCGGCTATGGCATCGGACACATCCTGCTGGA < 41bp 0.786598812125543 0.539694864699449 0.41383377 0.3174951 prediction 0.493807894852189 Functional Loss - SSC4D ENSG00000146700 CDS Human protein_coding chr7:76026962 chr7:76026960 nonsynonymous SNV 0.404 3 23 hm5C_associated_SNPs_66349 0 0 1 PPIG POSTAR2 ENCODE chr7:76026901-76026962
64251 chr3 186289915 186289915 1 + C T UCEC 186289913 + 186289893 186289933 41 CTATAAGATCTTGGGGGTGCCTCGAAGTGCCTCTATAAAGG CTATAAGATCTTGGGGGTGCCTTGAAGTGCCTCTATAAAGG < 41bp 0.84125338392932 0.594352071961719 0.87525165 0.05218509 prediction 0.4938026239352 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186289913 chr3:186289915 stopgain 1.000 1 23 hm5C_associated_SNPs_66350 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr3:186289888-186289916
64251 chr22 42475888 42475888 1 + G A GBM 42475885 + 42475865 42475905 41 CTCCGCCGCATGGAGCGGCTCAGGCCGGAGCCTGGTACCGT CTCCGCCGCATGGAGCGGCTCAGACCGGAGCCTGGTACCGT < 41bp 0.747727425958802 0.500828137872535 0.5732841 0.2803704 prediction 0.493798576172535 Functional Loss - SMDT1 ENSG00000183172 CDS Human protein_coding chr22:42475885 chr22:42475888 nonsynonymous SNV 0.033 0 24 hm5C_associated_SNPs_66352 0 0 6 LIN28A POSTAR2 GSE39873,GSM980594 chr22:42475877-42475898
64251 chr1 228646088 228646088 1 + G T PAAD 228646085 + 228646065 228646105 41 TCCCGCCTGGCACACTACAACAAGCGCTCCACCATCACGTC TCCCGCCTGGCACACTACAACAATCGCTCCACCATCACGTC < 41bp 0.746895223502282 0.360282526831033 0.7173791 0.36011612 prediction 0.493790447004564 Functional Loss - HIST3H2BB ENSG00000196890 CDS Human protein_coding chr1:228646085 chr1:228646088 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_66353 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:228646040-228646120
64251 chr7 134849631 134849631 1 + C T rs151231260 134849629 + 134849609 134849649 41 GGAAGTGGGTCAGGCTCTCCCTCCCGGGGCCTGGGTTTCTA GGAAGTGGGTCAGGCTCTCCCTTCCGGGGCCTGGGTTTCTA < 41bp 0.782594779001856 0.535721848645226 0.15244359 0.112172425 prediction 0.49374586071326 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849629 chr7:134849631 synonymous SNV . 0 23 hm5C_associated_SNPs_66358 0 0 1 SND1 POSTAR2 ENCODE chr7:134849517-134849680
64251 chr2 198571760 198571760 1 + C T CESC 198571758 + 198571738 198571778 41 TCTAGGCTGGGGGTCTCTGCCTCAGAGAGGAGTCTTGGAGA TCTAGGCTGGGGGTCTCTGCCTTAGAGAGGAGTCTTGGAGA < 41bp 0.781079904208514 0.534209554596863 0.12810603 0.07442495 prediction 0.493740699223303 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571758 chr2:198571760 nonsynonymous SNV 0.972 0 23 hm5C_associated_SNPs_66360 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:198571731-198571765
64251 chr11 65107973 65107973 1 + G T UCEC 65107970 + 65107950 65107990 41 GACTCACAGACCGGAGTAGCCCAGAGCAATTGTTACATCTG GACTCACAGACCGGAGTAGCCCATAGCAATTGTTACATCTG < 41bp 0.746870330456612 0.351468756490503 0.78534615 0.21298364 prediction 0.493740660913223 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65107970 chr11:65107973 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66361 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65107942-65107980
64251 chr1 161140930 161140930 1 + A C BLCA 161140929 + 161140909 161140949 41 TATAGAGAGTGGGCGCCAGGCAGCAGTCAGTGTCCTGGGCA TATAGAGAGTGGGCGCCAGGCCGCAGTCAGTGTCCTGGGCA < 41bp 0.755675571127419 0.508814369978469 0.32654893 0.24096444 prediction 0.493722402297899 Functional Loss - PPOX ENSG00000143224 CDS Human protein_coding chr1:161140929 chr1:161140930 synonymous SNV . 0 22 hm5C_associated_SNPs_66365 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:161140901-161140932
64251 chr3 136664643 136664643 1 + A C ESCA 136664639 + 136664619 136664659 41 GATGGGTGGTGGCGTGGTAGCTACAATGGACAAGTTGGATG GATGGGTGGTGGCGTGGTAGCTACCATGGACAAGTTGGATG < 41bp 0.923346472438096 0.676525400085917 0.30358312 0.03829238 prediction 0.49364214470436 Functional Loss - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664639 chr3:136664643 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_66377 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr3:136664638-136664668
64251 chr16 8942877 8942877 1 + G T rs186712555 8942874 + 8942854 8942894 41 ACACCCTCCATTGCTTGGTGCTGGGGTTGTGTGGCCTCCAC ACACCCTCCATTGCTTGGTGCTGTGGTTGTGTGGCCTCCAC < 41bp 0.885893576037677 0.639072578459693 0.78433716 0.13837418 prediction 0.493641995155969 Functional Loss - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942874 chr16:8942877 . . 0 24 hm5C_associated_SNPs_66378 1 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:8942860-8942880
64251 chr9 71835923 71835923 1 + T C PRAD 71835922 + 71835902 71835942 41 GGCAGAAGTTTCCGGAGTGGCTACAGCGAGAGGAGCCGGCT GGCAGAAGTTTCCGGAGTGGCCACAGCGAGAGGAGCCGGCT < 41bp 0.746819175247878 0.497462731654944 0.74136317 0.5303016 prediction 0.493638350495756 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71835922 chr9:71835923 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_66379 0 0 10 BUD13 POSTAR2 ENCODE chr9:71835893-71835967
64251 chr22 44527436 44527436 1 + T C UCEC 44527435 + 44527415 44527455 41 AAATAGGGCAGAAACAGAAGCTGCAGACGGTGCTGGAAGCA AAATAGGGCAGAAACAGAAGCCGCAGACGGTGCTGGAAGCA < 41bp 0.746818346152276 0.488180966693047 0.27272373 0.23052102 prediction 0.493636692304552 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44527435 chr22:44527436 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_66380 0 0 1 DDX24 POSTAR2 ENCODE chr22:44527364-44527448
64251 chr17 34171535 34171535 1 + G T LUAD 34171533 + 34171513 34171553 41 GGCTACAGAGGTCGTGGGGGCAGAGGTGGAGACCGAGGCGG GGCTACAGAGGTCGTGGGGGCATAGGTGGAGACCGAGGCGG < 41bp 0.895715797759327 0.648911973122726 0.8981389 0.8697816 prediction 0.493607649273202 Functional Loss - TAF15 ENSG00000172660 CDS Human other chr17:34171533 chr17:34171535 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_66383 0 0 17 RBPMS POSTAR2 SRX484627 chr17:34171480-34171540
64251 chr9 140507481 140507481 1 + G A rs76318189 140507478 + 140507458 140507498 41 GGTAAGTTTGGGAGCCAGTTCCCGAGTGGTGACCCCTGGGG GGTAAGTTTGGGAGCCAGTTCCCAAGTGGTGACCCCTGGGG < 41bp 0.757015921429819 0.510225626110383 0.75004303 0.30308777 prediction 0.493580590638872 Functional Loss - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140507478 chr9:140507481 synonymous SNV . 0 24 hm5C_associated_SNPs_66386 0 0 4 BUD13 POSTAR2 ENCODE chr9:140507456-140507526
64251 chr2 69969133 69969133 1 + G A rs13429773 69969130 + 69969110 69969150 41 GGCCGTCCCGGCCCGGGGCCCCAGGTGCGCTTCCCCTAGAG GGCCGTCCCGGCCCGGGGCCCCAAGTGCGCTTCCCCTAGAG < 41bp 0.74731717697995 0.500528047607622 0.8712243 0.18307987 prediction 0.493578258744656 Functional Loss - ANXA4 ENSG00000196975 UTR5 Human protein_coding chr2:69969130 chr2:69969133 . . 0 24 hm5C_associated_SNPs_66387 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:69969133-69969134
64251 chr5 118728655 118728655 1 + G T LUSC 118728653 + 118728633 118728673 41 GATGAGCTCTACAGAGTGACCAGGGAGTACACCCAAAACAA GATGAGCTCTACAGAGTGACCATGGAGTACACCCAAAACAA < 41bp 0.874566766169237 0.627794252111754 0.89914906 0.054258436 prediction 0.493545028114964 Functional Loss - TNFAIP8 ENSG00000145779 CDS Human protein_coding chr5:118728653 chr5:118728655 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_66394 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:118728632-118728656
64251 chr11 63719959 63719959 1 + C T UCEC 63719957 + 63719937 63719977 41 GACCGAGCCTGGTACCTCATCGCGTGGGAAAACAGCTCCGT GACCGAGCCTGGTACCTCATCGTGTGGGAAAACAGCTCCGT < 41bp 0.811876267788845 0.565112137797677 0.56567657 0.45420247 prediction 0.493528259982336 Functional Loss - NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719957 chr11:63719959 nonsynonymous SNV 0.978 3 23 hm5C_associated_SNPs_66397 0 0 3 GRWD1 POSTAR2 ENCODE chr11:63719953-63720040
64251 chr2 219619051 219619051 1 + G T UCEC 219619048 + 219619028 219619068 41 CAAGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCTCCA CAAGTGCTCTGGGCAGACTTCAATACTTTCTGCTTCCTCCA < 41bp 0.746756870081834 0.360910582767045 0.40706095 0.17098057 prediction 0.493513740163668 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219619048 chr2:219619051 nonsynonymous SNV 0.103 1 24 hm5C_associated_SNPs_66400 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:219619033-219619059
64251 chr14 93151468 93151468 1 + G A HNSC 93151465 + 93151445 93151485 41 GAGCGCCGGCGTACTCTCAACAAGGCCCGGGCCTCCCGCTC GAGCGCCGGCGTACTCTCAACAAAGCCCGGGCCTCCCGCTC < 41bp 0.747355659822049 0.50060439708596 0.46323276 0.16312245 prediction 0.493502525472177 Functional Loss - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93151465 chr14:93151468 synonymous SNV . 0 24 hm5C_associated_SNPs_66401 0 0 2 PRPF8 POSTAR2 ENCODE chr14:93151460-93151539
64251 chr15 75188504 75188504 1 + A C UCEC 75188500 + 75188480 75188520 41 CTGTGACCCTCAGCGGCTGCCGGAAACAACATGGAGGACAT CTGTGACCCTCAGCGGCTGCCGGACACAACATGGAGGACAT < 41bp 0.746749256313971 0.342987903577999 0.90035564 0.8890523 prediction 0.493498512627943 Functional Loss - MPI ENSG00000178802 CDS Human protein_coding chr15:75188500 chr15:75188504 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_66403 0 0 1 PPIG POSTAR2 ENCODE chr15:75188499-75188554
64251 chr6 1611048 1611048 1 + A C UCEC 1611047 + 1611027 1611067 41 GGGACAACAAGCAGGGCTGGCAGAACAGCATCCGCCACAAC GGGACAACAAGCAGGGCTGGCCGAACAGCATCCGCCACAAC < 41bp 0.747406358858219 0.500660645289917 0.53077054 0.26152122 prediction 0.493491427136604 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1611047 chr6:1611048 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_66405 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:1610943-1611052
64251 chr12 101012322 101012322 1 + G T UCEC 101012320 + 101012300 101012340 41 TCTGGGCCTGAAGATTCCATCAGCATTCCAAAATCATGCTG TCTGGGCCTGAAGATTCCATCATCATTCCAAAATCATGCTG < 41bp 0.880479088176651 0.633735439536446 0.1025638 0.027593672 prediction 0.49348729728041 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101012320 chr12:101012322 nonsynonymous SNV 0.920 0 23 hm5C_associated_SNPs_66407 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:101012312-101012340
64251 chr14 104198969 104198969 1 + G A UCEC 104198966 + 104198946 104198986 41 CTCTCCTCCAGGAGGCAACGCACGGGCCACAGGCATGTTCC CTCTCCTCCAGGAGGCAACGCACAGGCCACAGGCATGTTCC < 41bp 0.755148924271565 0.508412336815201 0.30838984 0.14940247 prediction 0.493473174912729 Functional Loss - ZFYVE21 ENSG00000100711 CDS Human protein_coding chr14:104198966 chr14:104198969 nonsynonymous SNV 0.782 3 24 hm5C_associated_SNPs_66410 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:104198961-104198990
64251 chr7 120629789 120629789 1 + G C HNSC 120629788 + 120629768 120629808 41 GACTCTGACCCTCCGAGGGTCGAGGAAGCTCACAGCCGCTG GACTCTGACCCTCCGAGGGTCCAGGAAGCTCACAGCCGCTG < 41bp 0.746730722015548 0.44003778378416 0.90916765 0.829957 prediction 0.493461444031097 Functional Loss - CPED1 ENSG00000106034 CDS Human protein_coding chr7:120629788 chr7:120629789 synonymous SNV . 0 22 hm5C_associated_SNPs_66413 0 0 1 RBM15 POSTAR2 ENCODE chr7:120629733-120629826
64251 chr10 7839090 7839090 1 + C T UCEC 7839088 + 7839068 7839108 41 GGTAGCGGCAGCAAAATATGCCCGAGCTGAGAGAGAGCTGA GGTAGCGGCAGCAAAATATGCCTGAGCTGAGAGAGAGCTGA < 41bp 0.82408256598157 0.577361858519029 0.07185441 0.083432436 prediction 0.493441414925081 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7839088 chr10:7839090 stopgain 0.998 1 23 hm5C_associated_SNPs_66416 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:7839060-7839100
64251 chr16 28911960 28911960 1 + C T UCEC 28911958 + 28911938 28911978 41 GACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGCTGTG GACCCTCCGCGCAAGGAGGTCATGGGCTCCATCCAGCTGTG < 41bp 0.797104442762797 0.550390562085347 0.39467517 0.29443026 prediction 0.493427761354899 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28911958 chr16:28911960 nonsynonymous SNV 0.963 1 23 hm5C_associated_SNPs_66418 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28911958-28911996
64251 chr4 190862151 190862151 1 + A C rs200478293 190862147 + 190862127 190862167 41 CCGGCCTCAGCCTCTCCGCGCAGAAGTTTCCCGGAGCCATG CCGGCCTCAGCCTCTCCGCGCAGACGTTTCCCGGAGCCATG < 41bp 0.746699510395095 0.495611142399148 0.60925436 0.5296114 prediction 0.49339902079019 Functional Loss - FRG1 ENSG00000109536 UTR5 Human protein_coding chr4:190862147 chr4:190862151 . . 0 25 hm5C_associated_SNPs_66423 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:190862151-190862152
64251 chr5 153765930 153765930 1 + C T rs185134666 153765928 + 153765908 153765948 41 ATCGGAAGTGGTTCTGGGAACTCGGCGGGTATGACCCAGGC ATCGGAAGTGGTTCTGGGAACTTGGCGGGTATGACCCAGGC < 41bp 0.746687793281229 0.473405744827082 0.76454926 0.7069284 prediction 0.493375586562459 Functional Loss - GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153765928 chr5:153765930 synonymous SNV . 0 23 hm5C_associated_SNPs_66427 0 0 1 ZNF622 POSTAR2 ENCODE chr5:153765891-153765971
64251 chr10 43612056 43612056 1 + C T UCEC 43612054 + 43612034 43612074 41 GGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTG GGATCCAAAGTGGGAATTCCCTTGGAAGAACTTGGTTCTTG < 41bp 0.746680307061957 0.463972459803161 0.075849295 0.11697036 prediction 0.493360614123914 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43612054 chr10:43612056 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_66432 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:43612041-43612067
64251 chr11 47179444 47179444 1 + C T BLCA 47179442 + 47179422 47179462 41 TATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAA TATGGATTCCTCATGGCTCTCTTAAAGCACCGTGGAATCAA < 41bp 0.746675021739114 0.451615204058543 0.22144449 0.045285642 prediction 0.493350043478229 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47179442 chr11:47179444 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_66437 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:47179431-47179456
64251 chr11 47179443 47179443 1 + T C COAD 47179442 + 47179422 47179462 41 TATGGATTCCTCATGGCTCTCTCAAAGCACCGTGGAATCAA TATGGATTCCTCATGGCTCTCCCAAAGCACCGTGGAATCAA < 41bp 0.746675021739114 0.472115318221777 0.22144449 0.102639616 prediction 0.493350043478229 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47179442 chr11:47179443 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_66438 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:47179431-47179456
64251 chr8 81399682 81399682 1 + G C CESC 81399678 + 81399658 81399698 41 AGCAGCAGCAGGCGGTCGGGCGGCGATGGCGGGGACGAAGT AGCAGCAGCAGGCGGTCGGGCGGCCATGGCGGGGACGAAGT < 41bp 0.746672510118647 0.482802926642894 0.8560934 0.82441866 prediction 0.493345020237294 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399678 chr8:81399682 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_66439 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:81399662-81399688
64251 chr16 30409512 30409512 1 + G A THCA 30409509 + 30409489 30409529 41 TGTGTGTGGAAAGGAGTTTGCCCGGGGATCCGACCTGGTGA TGTGTGTGGAAAGGAGTTTGCCCAGGGATCCGACCTGGTGA < 41bp 0.76144003357333 0.514768698551677 0.8621264 0.25126907 prediction 0.493342670043307 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409509 chr16:30409512 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_66442 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30409488-30409522
64251 chr6 43099823 43099823 1 + C T rs200192410 43099821 + 43099801 43099841 41 TGCTGACCCAGGTCCGGCCACGCAATGCAGGGATCTACCGC TGCTGACCCAGGTCCGGCCACGTAATGCAGGGATCTACCGC < 41bp 0.805489777065295 0.558840691894691 0.4598569 0.7333462 prediction 0.493298170341209 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43099821 chr6:43099823 synonymous SNV . 0 23 hm5C_associated_SNPs_66450 0 0 2 SND1 POSTAR2 ENCODE chr6:43099779-43099827
64251 chr6 33373178 33373178 1 + C T CESC 33373176 + 33373156 33373196 41 CCAGTTGGAGGGGCTGATCCCTCGGGCCCTGCGGCACCTCT CCAGTTGGAGGGGCTGATCCCTTGGGCCCTGCGGCACCTCT < 41bp 0.801003417760142 0.554357055602821 0.82976484 0.39751238 prediction 0.493292724314641 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33373176 chr6:33373178 nonsynonymous SNV 0.961 4 23 hm5C_associated_SNPs_66452 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33373151-33373201
64251 chr14 60585188 60585188 1 + C T rs189013229 60585186 + 60585166 60585206 41 TATACTCAACATTGTCTTTTCTCCATTCGTGTTGGTCATCA TATACTCAACATTGTCTTTTCTTCATTCGTGTTGGTCATCA < 41bp 0.746644796761022 0.43295197589637 0.97216845 0.46874264 prediction 0.493289593522044 Functional Loss - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60585186 chr14:60585188 nonsynonymous SNV 0.211 3 23 hm5C_associated_SNPs_66453 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:60585165-60585192
64251 chr16 31501786 31501786 1 - C T CESC 31501789 - 31501769 31501809 41 GGGCATTGAGGTTGACCACACGGGCCCAGCTCGGGTCCTCG GGGCATTGAGGTTGACCACACGGACCCAGCTCGGGTCCTCG < 41bp 0.746615694315016 0.495274760016253 0.43528432 0.17018178 prediction 0.493231388630031 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501789 chr16:31501786 nonsynonymous SNV 0.978 3 24 hm5C_associated_SNPs_66459 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:31501783-31501816
64251 chr2 163204218 163204218 1 + C T SKCM 163204216 + 163204196 163204236 41 ACTTATTCCTCAGCTGGTGACTCCGTGTATACTTACTTCAG ACTTATTCCTCAGCTGGTGACTTCGTGTATACTTACTTCAG < 41bp 0.746604998010011 0.46464531155859 0.082327545 0.043343455 prediction 0.493209996020022 Functional Loss - GCA ENSG00000115271 CDS Human protein_coding chr2:163204216 chr2:163204218 nonsynonymous SNV 0.077 0 23 hm5C_associated_SNPs_66465 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:163204214-163204236
64251 chr1 226027600 226027600 1 + G A GBM 226027597 + 226027577 226027617 41 TCTCTACCCTGACCCTCCTCCTGGGACAGCGTTTCGGGAGG TCTCTACCCTGACCCTCCTCCTGAGACAGCGTTTCGGGAGG < 41bp 0.759421688093247 0.512830793097055 0.8810022 0.5896236 prediction 0.493181789992383 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027597 chr1:226027600 nonsynonymous SNV 0.128 4 24 hm5C_associated_SNPs_66473 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:226027573-226027605
64251 chr3 101573503 101573503 1 + G T LUAD 101573501 + 101573481 101573521 41 AGATGAATGCACTTCACATGCTGGATATTAAAGAGCACAAT AGATGAATGCACTTCACATGCTTGATATTAAAGAGCACAAT < 41bp 0.87375844175744 0.627167845099278 0.25051373 0.1020709 prediction 0.493181193316323 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101573501 chr3:101573503 synonymous SNV . 0 23 hm5C_associated_SNPs_66474 0 0 5 BUD13 POSTAR2 ENCODE chr3:101573487-101573525
64251 chr15 51974034 51974034 1 + G T STAD 51974031 + 51974011 51974051 41 TCCCCAAACCTGGAGGAAGCCAAGGTATGTGAACACTTTTC TCCCCAAACCTGGAGGAAGCCAATGTATGTGAACACTTTTC < 41bp 0.746579569586841 0.367405227588291 0.24263915 0.12109542 prediction 0.493159139173681 Functional Loss - SCG3 ENSG00000104112 CDS Human protein_coding chr15:51974031 chr15:51974034 nonsynonymous SNV 0.825 4 24 hm5C_associated_SNPs_66481 0 0 1 DDX3X POSTAR2 ENCODE chr15:51973943-51974035
64251 chr19 3530836 3530836 1 + C T SKCM 3530834 + 3530814 3530854 41 GTGGAAGGGGACTCAGTGACCTCCGTGGGCTGGTCTGAGCG GTGGAAGGGGACTCAGTGACCTTCGTGGGCTGGTCTGAGCG < 41bp 0.802403852633659 0.555829853792877 0.86989033 0.41893625 prediction 0.493147997681563 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3530834 chr19:3530836 nonsynonymous SNV 0.981 4 23 hm5C_associated_SNPs_66483 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:3530798-3530836
64251 chrX 101970665 101970665 1 + A C LUSC 101970661 + 101970641 101970681 41 TCTGGATCTGAGGATGAGGCCAGCAACCCATTCTCCTTCTG TCTGGATCTGAGGATGAGGCCAGCCACCCATTCTCCTTCTG < 41bp 0.746571283460749 0.326028850650169 0.26718158 0.18145397 prediction 0.493142566921497 Functional Loss - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101970661 chrX:101970665 nonsynonymous SNV 0.350 2 25 hm5C_associated_SNPs_66484 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chrX:101970663-101970687
64251 chr11 33374802 33374802 1 + C T SKCM 33374800 + 33374780 33374820 41 ACCTGGCTGGAAATACACACCTCGGAGGACAGCCTACTCTA ACCTGGCTGGAAATACACACCTTGGAGGACAGCCTACTCTA < 41bp 0.746537511211996 0.476784626966826 0.094151825 0.036876053 prediction 0.493075022423991 Functional Loss - HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33374800 chr11:33374802 synonymous SNV . 0 23 hm5C_associated_SNPs_66496 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:33374768-33374806
64251 chr8 133829707 133829707 1 + G T LUAD 133829705 + 133829685 133829725 41 TCTTACCGTAATGAATGTCCCAGGGCAGAAAAAGAGGATAC TCTTACCGTAATGAATGTCCCATGGCAGAAAAAGAGGATAC < 41bp 0.746530104791027 0.405761404257994 0.7664008 0.16842622 prediction 0.493060209582054 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133829705 chr8:133829707 nonsynonymous SNV 0.983 1 23 hm5C_associated_SNPs_66498 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:133829679-133829710
64251 chr21 37711184 37711184 1 + G T COAD 37711181 + 37711161 37711201 41 GAACTTGATGCTATTATAGGCAAGAAGGGGACGAGGATCAT GAACTTGATGCTATTATAGGCAATAAGGGGACGAGGATCAT < 41bp 0.746522377085083 0.368029238715747 0.2707982 0.14250651 prediction 0.493044754170167 Functional Loss - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37711181 chr21:37711184 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_66500 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:37711135-37711185
64251 chr17 37075832 37075832 1 + A T rs571735283 37075828 + 37075808 37075848 41 TCCCCACGCCCACCCCCAGTCTCCAGGGACCCTTGCCTGCC TCCCCACGCCCACCCCCAGTCTCCTGGGACCCTTGCCTGCC < 41bp 0.746508005606911 0.406290551168208 0.9547562 0.2464386 prediction 0.493016011213822 Functional Loss - LASP1 ENSG00000265784 ncRNA_intronic Human antisense chr17:37075828 chr17:37075832 . . 0 25 hm5C_associated_SNPs_66503 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:37075813-37075844
64251 chr18 8609900 8609900 1 + A T TGCT 8609896 + 8609876 8609916 41 CGCGGCGTGGGCAAGACCAGCCTGATGGAGCGCTTCACCGA CGCGGCGTGGGCAAGACCAGCCTGTTGGAGCGCTTCACCGA < 41bp 0.746505016527626 0.427498526056857 0.3390866 0.29508263 prediction 0.493010033055253 Functional Loss - RAB12 ENSG00000206418 CDS Human protein_coding chr18:8609896 chr18:8609900 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_66504 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr18:8609880-8609900
64251 chr9 95381833 95381833 1 - G A rs150074671 95381835 - 95381815 95381855 41 CCCTGCAGGTGCAGCAGTACCGCGTCGCCATGACTGCCAAG CCCTGCAGGTGCAGCAGTACCGTGTCGCCATGACTGCCAAG < 41bp 0.803886849466169 0.557388723212315 0.22620508 0.15287578 prediction 0.492996252507707 Functional Loss - IPPK ENSG00000127080 CDS Human protein_coding chr9:95381835 chr9:95381833 synonymous SNV . 0 23 hm5C_associated_SNPs_66506 0 0 1 BUD13 POSTAR2 ENCODE chr9:95381820-95381918
64251 chr6 28094593 28094593 1 + C T LIHC 28094591 + 28094571 28094611 41 ATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCC ATTCAGAAAGACGGGACATACTTATGGACAAGTTGGCCCCC < 41bp 0.808403849843097 0.561911370944769 0.03042838 0.01552394 prediction 0.492984957796657 Functional Loss - ZSCAN16 ENSG00000196812 CDS Human protein_coding chr6:28094591 chr6:28094593 synonymous SNV . 0 23 hm5C_associated_SNPs_66508 0 0 2 GRWD1 POSTAR2 ENCODE chr6:28094573-28094679
64251 chr17 4619814 4619814 1 + C T BLCA 4619812 + 4619792 4619832 41 CGCCACCTACCAGGCCTTCCCCCCGGTGCCCAACCCACCCC CGCCACCTACCAGGCCTTCCCCTCGGTGCCCAACCCACCCC < 41bp 0.792741248841645 0.546262386450242 0.54016936 0.16366994 prediction 0.492957724782806 Functional Loss - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4619812 chr17:4619814 nonsynonymous SNV 0.907 3 23 hm5C_associated_SNPs_66511 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:4619799-4619864
64251 chrX 103041613 103041613 1 + G T OV 103041611 + 103041591 103041631 41 ATCAAGCTCATTCTTTGGAGCGGGTGTGTCATTGTTTGGGA ATCAAGCTCATTCTTTGGAGCGTGTGTGTCATTGTTTGGGA < 41bp 0.746474073510354 0.397824122089355 0.20723212 0.011224151 prediction 0.492948147020708 Functional Loss - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103041611 chrX:103041613 synonymous SNV . 0 23 hm5C_associated_SNPs_66513 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:103041580-103041620
64251 chr4 2695385 2695385 1 + C T rs200076543 2695383 + 2695363 2695403 41 GCCGCCCCGAGGAATAGCCCCACGGGCTTGGCCCCCCTCCC GCCGCCCCGAGGAATAGCCCCATGGGCTTGGCCCCCCTCCC < 41bp 0.778136084031941 0.531663787635453 0.84655136 0.87410206 prediction 0.492944592792977 Functional Loss - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2695383 chr4:2695385 nonsynonymous SNV 0.684 4 23 hm5C_associated_SNPs_66515 0 0 1 METAP2 POSTAR2 ENCODE chr4:2695380-2695472
64251 chr19 11097617 11097617 1 + C T LUAD 11097615 + 11097595 11097635 41 AACATGCCTCCCCCAGGACCCTCGGGCGTGCCCCCCGGGAT AACATGCCTCCCCCAGGACCCTTGGGCGTGCCCCCCGGGAT < 41bp 0.750606941818104 0.504143259814605 0.34351975 0.3258952 prediction 0.492927364006996 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11097615 chr19:11097617 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_66519 1 0 5 FMR1 POSTAR2 ENCODE chr19:11097592-11097672
64251 chr9 131256879 131256879 1 + G T PAAD 131256876 + 131256856 131256896 41 AGGCGAAGCTGGCTGAGTGCCAAGACCAACTGCAGGGCTAT AGGCGAAGCTGGCTGAGTGCCAATACCAACTGCAGGGCTAT < 41bp 0.746461711835712 0.389145136759295 0.3622613 0.16401774 prediction 0.492923423671424 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131256876 chr9:131256879 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_66521 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:131256851-131256919
64251 chr9 130207073 130207073 1 + C T COAD 130207071 + 130207051 130207091 41 GAGAAGCCCTACAGATGTGCCGCGTGTGGGAAGGCCTTCAG GAGAAGCCCTACAGATGTGCCGTGTGTGGGAAGGCCTTCAG < 41bp 0.781751498076424 0.535292321024315 0.09098604 0.052123904 prediction 0.492918354104218 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207071 chr9:130207073 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_66523 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:130207049-130207087
64251 chr22 20861926 20861926 1 + G C rs572832970 20861925 + 20861905 20861945 41 GACTGAGGCGGCGGCGGTGGCGGCCAAGCGGGATACGGGCG GACTGAGGCGGCGGCGGTGGCCGCCAAGCGGGATACGGGCG < 41bp 0.746442285920904 0.457296669008194 0.9073422 0.79538983 prediction 0.492884571841807 Functional Loss - MED15 ENSG00000099917 UTR5 Human protein_coding chr22:20861925 chr22:20861926 . . 0 22 hm5C_associated_SNPs_66528 0 0 4 GEMIN5 POSTAR2 ENCODE chr22:20861891-20862049
64251 chr12 98987826 98987826 1 + G C HNSC 98987825 + 98987805 98987845 41 CCACATCTGCAGCTGGTGCACGATGGTCTCGGGGACCTCCG CCACATCTGCAGCTGGTGCACCATGGTCTCGGGGACCTCCG < 41bp 0.857022501842577 0.610588069212528 0.34091616 0.07769364 prediction 0.492868865260097 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98987825 chr12:98987826 nonsynonymous SNV 0.809 2 22 hm5C_associated_SNPs_66532 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:98987740-98987860
64251 chr6 27100863 27100863 1 + G T BLCA 27100860 + 27100840 27100880 41 TTGCGCTCGCTATGTCTGGACGTGGCAAGCAGGGAGGCAAA TTGCGCTCGCTATGTCTGGACGTTGCAAGCAGGGAGGCAAA < 41bp 0.746428939346118 0.366159070567637 0.5287366 0.38089663 prediction 0.492857878692236 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100860 chr6:27100863 nonsynonymous SNV 0.090 2 24 hm5C_associated_SNPs_66534 0 0 57 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:27100820-27100880
64251 chr11 60698110 60698110 1 + G T LUAD 60698107 + 60698087 60698127 41 CCTCATCACCTGCCACCGTGCTGGGCTCACAGAGCCAGATT CCTCATCACCTGCCACCGTGCTGTGCTCACAGAGCCAGATT < 41bp 0.74642305518723 0.345353813143234 0.37555057 0.14390421 prediction 0.492846110374459 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60698107 chr11:60698110 nonsynonymous SNV 0.323 0 24 hm5C_associated_SNPs_66537 0 0 1 BUD13 POSTAR2 ENCODE chr11:60698056-60698121
64251 chr17 76167657 76167657 1 + C T UCEC 76167655 + 76167635 76167675 41 AACCAGTGGGCAGTCACCAACCCGAAGGACGTGCTGGTGGG AACCAGTGGGCAGTCACCAACCTGAAGGACGTGCTGGTGGG < 41bp 0.805697473091249 0.559282768891346 0.30566496 0.2009776 prediction 0.492829408399807 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167655 chr17:76167657 stopgain 0.000 1 23 hm5C_associated_SNPs_66541 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:76167640-76167660
64251 chr22 24836570 24836570 1 + G C SARC 24836569 + 24836549 24836589 41 AGGTACAATGGCTTGGTGACCGGCACGAGGGCTAAGGGCAT AGGTACAATGGCTTGGTGACCCGCACGAGGGCTAAGGGCAT < 41bp 0.854031818748784 0.607620442789495 0.3569754 0.0712966 prediction 0.492822751918579 Functional Loss - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24836569 chr22:24836570 nonsynonymous SNV 0.966 3 22 hm5C_associated_SNPs_66543 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr22:24836564-24836594
64251 chr3 127390319 127390319 1 + C T STAD 127390317 + 127390297 127390337 41 CACAACCAGCAGCTGCCAGGCGCGGGCCAGCCAGGTGCGCA CACAACCAGCAGCTGCCAGGCGTGGGCCAGCCAGGTGCGCA < 41bp 0.774115720697757 0.527709028379806 0.14062762 0.17315215 prediction 0.492813384635902 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127390317 chr3:127390319 nonsynonymous SNV 0.980 3 23 hm5C_associated_SNPs_66546 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:127390317-127390358
64251 chr18 9860925 9860925 1 + A C rs1065571 9860924 + 9860904 9860944 41 GGGAAACACTTATTTTGCTTCAAGAGTTCCACTTGGCTCTC GGGAAACACTTATTTTGCTTCCAGAGTTCCACTTGGCTCTC < 41bp 0.76132193944294 0.514916965878177 0.10005522 0.27856523 prediction 0.492809947129526 Functional Loss - RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9860924 chr18:9860925 . . 0 22 hm5C_associated_SNPs_66547 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:9860892-9860927
64251 chr16 1838189 1838189 1 + C T rs148673802 1838187 + 1838167 1838207 41 GCGGAGAGGAGCTGGCCCAGCTCGCCGGGGTGCCCTTCTTA GCGGAGAGGAGCTGGCCCAGCTTGCCGGGGTGCCCTTCTTA < 41bp 0.747280202487216 0.500879920731241 0.24166608 0.15961412 prediction 0.49280056351195 Functional Loss - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1838187 chr16:1838189 nonsynonymous SNV 0.005 1 23 hm5C_associated_SNPs_66552 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:1838167-1838190
64251 chr2 219602540 219602540 1 + G T rs61733652 219602538 + 219602518 219602558 41 GAGTCTGGCCTCAGGCCCATCAGCAAGTGAAGCCAATCTGG GAGTCTGGCCTCAGGCCCATCATCAAGTGAAGCCAATCTGG < 41bp 0.746400185738763 0.39895242101295 0.7755352 0.29167727 prediction 0.492800371477526 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219602538 chr2:219602540 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_66553 0 0 3 DDX3X POSTAR2 ENCODE chr2:219602436-219602540
64251 chr3 38414227 38414227 1 + G T UCEC 38414225 + 38414205 38414245 41 GGCCTTCACTGGGGACAACCCAGGTGAGTATCTCGGGGAGT GGCCTTCACTGGGGACAACCCATGTGAGTATCTCGGGGAGT < 41bp 0.746398602433289 0.393888057740065 0.9253217 0.32815465 prediction 0.492797204866578 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38414225 chr3:38414227 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_66554 0 0 12 BUD13 POSTAR2 ENCODE chr3:38414121-38414254
64251 chr16 46724994 46724994 1 + G T SARC 46724991 + 46724971 46725011 41 CCAGCAGTGCAGTCATGTGCCTGGACCTTGCAGCTTCCTGG CCAGCAGTGCAGTCATGTGCCTGTACCTTGCAGCTTCCTGG < 41bp 0.918423652393943 0.672026780322257 0.25711378 0.26307085 prediction 0.492793744143371 Functional Loss - ORC6 ENSG00000091651 CDS Human protein_coding chr16:46724991 chr16:46724994 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66557 0 0 38 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:46724915-46725014
64251 chr12 69995115 69995115 1 + C T STAD 69995113 + 69995093 69995133 41 CCACCCCTGTTAAGCATTCCCACGTGCTGTCGATCTTTGGA CCACCCCTGTTAAGCATTCCCATGTGCTGTCGATCTTTGGA < 41bp 0.746394372535853 0.49040829957239 0.12231392 0.15624022 prediction 0.492788745071706 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995113 chr12:69995115 synonymous SNV . 0 23 hm5C_associated_SNPs_66558 0 0 36 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:69995080-69995160
64251 chr19 53994537 53994537 1 + G T LUSC 53994535 + 53994515 53994555 41 ATGCCATCGTAGACTTCATACTGGAGAGAAACCTTTCAAGT ATGCCATCGTAGACTTCATACTTGAGAGAAACCTTTCAAGT < 41bp 0.86069260600683 0.614299406897234 0.08528906 0.025026768 prediction 0.492786398219192 Functional Loss - ZNF813 ENSG00000198346 CDS Human protein_coding chr19:53994535 chr19:53994537 stopgain 0.042 0 23 hm5C_associated_SNPs_66559 0 0 1 UCHL5 POSTAR2 ENCODE chr19:53994523-53994588
64251 chr11 121477578 121477578 1 + A T LUAD 121477574 + 121477554 121477594 41 TGCCAGATGCCCCTCGAAATCTCCAGCTGTCACTCCCCAGG TGCCAGATGCCCCTCGAAATCTCCTGCTGTCACTCCCCAGG < 41bp 0.746378900003177 0.400350914320384 0.9310165 0.10530764 prediction 0.492757800006355 Functional Loss - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121477574 chr11:121477578 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_66567 0 0 1 PPIG POSTAR2 ENCODE chr11:121477563-121477658
64251 chr13 24233219 24233219 1 + C T rs61756242 24233217 + 24233197 24233237 41 AAGGTCAACCTCGTGAAGATCGCGTCCACGGCCTCCAGCCC AAGGTCAACCTCGTGAAGATCGTGTCCACGGCCTCCAGCCC < 41bp 0.74637415669586 0.471759985690065 0.28122953 0.2511263 prediction 0.49274831339172 Functional Loss - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24233217 chr13:24233219 nonsynonymous SNV 0.745 2 23 hm5C_associated_SNPs_66568 0 0 5 BUD13 POSTAR2 ENCODE chr13:24233139-24233224
64251 chr1 36757044 36757044 1 + G T STAD 36757042 + 36757022 36757062 41 TCCATAGCAACAAAAAGGAACAGGAGTTTCGTTCCATTTTC TCCATAGCAACAAAAAGGAACATGAGTTTCGTTCCATTTTC < 41bp 0.746374004762516 0.402074412946426 0.40241823 0.16414392 prediction 0.492748009525031 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36757042 chr1:36757044 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_66570 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:36756988-36757046
64251 chr11 111908054 111908054 1 + G T GBM 111908051 + 111908031 111908071 41 AATCCTGGTCCCTGAAGGCACAAGAGATGTCCCTCTAGGAA AATCCTGGTCCCTGAAGGCACAATAGATGTCCCTCTAGGAA < 41bp 0.746372615415468 0.350159023399152 0.26287755 0.0664171 prediction 0.492745230830935 Functional Loss - DLAT ENSG00000150768 CDS Human protein_coding chr11:111908051 chr11:111908054 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66571 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:111908053-111908086
64251 chr19 19616217 19616217 1 + C T LUAD 19616215 + 19616195 19616235 41 AGAGCTCCTCGGCCGTGGACCGCCAGCGAGAGTACCTCCTG AGAGCTCCTCGGCCGTGGACCGTCAGCGAGAGTACCTCCTG < 41bp 0.794103983735514 0.547732573130685 0.4970754 0.10248345 prediction 0.492742821209658 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19616215 chr19:19616217 synonymous SNV . 0 23 hm5C_associated_SNPs_66572 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:19616179-19616218
64251 chr19 40485867 40485867 1 + A C BLCA 40485863 + 40485843 40485883 41 GACGAGATTGATGCCATCGCCACCAAGAGATTCGATGCTCA GACGAGATTGATGCCATCGCCACCCAGAGATTCGATGCTCA < 41bp 0.746355437821526 0.306694661081414 0.059295446 0.06518364 prediction 0.492710875643052 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40485863 chr19:40485867 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_66574 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40485800-40485878
64251 chr9 2652886 2652886 1 + T C COAD 2652885 + 2652865 2652905 41 TCCTGTGTACTTGAAAACCACTGAAGAGGACCTCTCCATAG TCCTGTGTACTTGAAAACCACCGAAGAGGACCTCTCCATAG < 41bp 0.754010877469155 0.507661198354891 0.12072101 0.031265616 prediction 0.492699358228528 Functional Loss - VLDLR ENSG00000147852 CDS Human protein_coding chr9:2652885 chr9:2652886 synonymous SNV . 0 22 hm5C_associated_SNPs_66576 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:2652865-2652899
64251 chr19 36279065 36279065 1 + G A LUAD 36279062 + 36279042 36279082 41 ACCCCCGAAGCCGTTCAGATCCCGGTCCCCCAGTCCCCCGC ACCCCCGAAGCCGTTCAGATCCCAGTCCCCCAGTCCCCCGC < 41bp 0.759458666235164 0.51311378775886 0.688993 0.2684198 prediction 0.492689756952608 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279062 chr19:36279065 nonsynonymous SNV 0.140 2 24 hm5C_associated_SNPs_66579 0 0 7 DDX59 POSTAR2 ENCODE chr19:36279037-36279113
64251 chr17 6941738 6941738 1 + G T UCEC 6941736 + 6941716 6941756 41 GACCCTGCTGTGGGTGGTCCCAGGGCCCAACTCACCTCTCT GACCCTGCTGTGGGTGGTCCCATGGCCCAACTCACCTCTCT < 41bp 0.902701830772995 0.656385151726819 0.9478272 0.56244844 prediction 0.492633358092352 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941736 chr17:6941738 nonsynonymous SNV 0.867 0 23 hm5C_associated_SNPs_66585 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:6941725-6941755
64251 chr12 122216934 122216934 1 - C T rs139204142 122216937 - 122216917 122216957 41 TTCCTTCCTTCCCCCAGGAACACGGAGGCCACCGAGGGGGC TTCCTTCCTTCCCCCAGGAACACAGAGGCCACCGAGGGGGC < 41bp 0.746316563130087 0.497721366323819 0.44339967 0.22586635 prediction 0.492633126260173 Functional Loss - RHOF;TMEM120B ENSG00000139725;ENSG00000188735 UTR3 Human other chr12:122216937 chr12:122216934 . . 0 24 hm5C_associated_SNPs_66586 0 0 1 PCBP2 POSTAR2 ENCODE chr12:122216916-122216985
64251 chr2 96933114 96933114 1 + G T LUAD 96933112 + 96933092 96933132 41 AAGGCCACCAGCGCACCGTGCGGAAGGTAGCCTGGTCCCCC AAGGCCACCAGCGCACCGTGCGTAAGGTAGCCTGGTCCCCC < 41bp 0.895993457389835 0.649680282820573 0.75074077 0.25845572 prediction 0.492626349138523 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96933112 chr2:96933114 synonymous SNV . 0 23 hm5C_associated_SNPs_66588 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:96933100-96933137
64251 chrX 101971348 101971348 1 + C T UCEC 101971346 + 101971326 101971366 41 CCACAAGCCCCTTTGGAATTCCCGAAGAGGCTTCTGAAATG CCACAAGCCCCTTTGGAATTCCTGAAGAGGCTTCTGAAATG < 41bp 0.746309169741619 0.473278293071337 0.08849889 0.060741693 prediction 0.492618339483238 Functional Loss - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971346 chrX:101971348 synonymous SNV . 0 23 hm5C_associated_SNPs_66589 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chrX:101971323-101971361
64251 chr1 118479447 118479447 1 + A T LUAD 118479443 + 118479423 118479463 41 ATGAAAGTGGTCTGTACCGTCTAAAGGGGCACAAGGATGCC ATGAAAGTGGTCTGTACCGTCTAATGGGGCACAAGGATGCC < 41bp 0.746294586480387 0.420341204117243 0.17922187 0.10981715 prediction 0.492589172960773 Functional Loss - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118479443 chr1:118479447 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_66593 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:118479407-118479463
64251 chr5 133477961 133477961 1 + G T BRCA 133477959 + 133477939 133477979 41 CCCGGCCATTGTGCCCCCCTCAGGGAAGCAGGAGCTGCAGC CCCGGCCATTGTGCCCCCCTCATGGAAGCAGGAGCTGCAGC < 41bp 0.896031855667652 0.649738861518545 0.9341669 0.82794833 prediction 0.492585988298215 Functional Loss - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133477959 chr5:133477961 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_66594 0 0 1 PCBP2 POSTAR2 ENCODE chr5:133477875-133477996
64251 chr17 40666448 40666448 1 + C T DLBC 40666446 + 40666426 40666466 41 CTCCTGATCATGGAGGGCCTCTCGGCCTTTCTCCACGCACT CTCCTGATCATGGAGGGCCTCTTGGCCTTTCTCCACGCACT < 41bp 0.746285303322866 0.48361854849758 0.2661367 0.059579223 prediction 0.492570606645731 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40666446 chr17:40666448 nonsynonymous SNV 0.977 5 23 hm5C_associated_SNPs_66596 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40666380-40666460
64251 chr7 75517439 75517439 1 + G A HNSC 75517436 + 75517416 75517456 41 TCCTGGCCCTCCTGCACCCCCGGGCACATGCCCACCTTGCC TCCTGGCCCTCCTGCACCCCCGGACACATGCCCACCTTGCC < 41bp 0.753656828547351 0.507388936806884 0.8157723 0.3282234 prediction 0.492535783480934 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517436 chr7:75517439 synonymous SNV . 0 24 hm5C_associated_SNPs_66603 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75517409-75517454
64251 chr5 251561 251561 1 + C T PAAD 251559 + 251539 251579 41 GCACGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTA GCACGGAAGGAGTCACGGGGCGTGCATGCCAGGGAAGACTA < 41bp 0.7462475844474 0.486729391457916 0.17473859 0.37206358 prediction 0.492495168894801 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:251559 chr5:251561 nonsynonymous SNV 0.004 4 23 hm5C_associated_SNPs_66610 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:251524-251578
64251 chr2 71357813 71357813 1 + G T LUSC 71357810 + 71357790 71357830 41 ACAGCCATGGCGCCGCAGGTCTGGCGTCGACGGACCCTGGA ACAGCCATGGCGCCGCAGGTCTGTCGTCGACGGACCCTGGA < 41bp 0.912529880906058 0.666284699293352 0.41899556 0.15745938 prediction 0.492490363225413 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71357810 chr2:71357813 nonsynonymous SNV 0.432 2 24 hm5C_associated_SNPs_66612 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:71357788-71357822
64251 chr16 25180465 25180465 1 + G T LUSC 25180462 + 25180442 25180482 41 GGTGATCGGTTTGGGCAGATCATGATTGAAAACCTGCGGAG GGTGATCGGTTTGGGCAGATCATTATTGAAAACCTGCGGAG < 41bp 0.921009343726257 0.674766605753697 0.22805813 0.1780673 prediction 0.492485475945118 Functional Loss - LCMT1 ENSG00000205629 CDS Human protein_coding chr16:25180462 chr16:25180465 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66615 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:25180456-25180482
64251 chr19 54080795 54080795 1 + C T rs149071213 54080793 + 54080773 54080813 41 TCCACACCGGTGAGAAGCCTCACGAATGTAAGGAGTGTGGG TCCACACCGGTGAGAAGCCTCATGAATGTAAGGAGTGTGGG < 41bp 0.76661218183177 0.520369654995597 0.11126804 0.23921627 prediction 0.492485053672346 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080793 chr19:54080795 synonymous SNV . 0 23 hm5C_associated_SNPs_66616 0 0 1 EIF3H POSTAR2 ENCODE chr19:54080752-54080853
64251 chr7 106508978 106508978 1 + A C rs849389 106508977 + 106508957 106508997 41 GGTGAGGAAGGAAGAGTGGCCACTGGTGGATGACTGCACGG GGTGAGGAAGGAAGAGTGGCCCCTGGTGGATGACTGCACGG < 41bp 0.779961069428158 0.533720479230526 0.16842133 0.13455838 prediction 0.492481180395265 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508977 chr7:106508978 synonymous SNV . 0 22 hm5C_associated_SNPs_66617 0 0 1 FXR2 POSTAR2 ENCODE chr7:106508931-106508996
64251 chr16 46960867 46960867 1 + T C LIHC 46960866 + 46960846 46960886 41 ATGGCTCCAGACATGTTCTACTGCATGAAGCTCCTGGAGGA ATGGCTCCAGACATGTTCTACCGCATGAAGCTCCTGGAGGA < 41bp 0.746238564796943 0.475493019259096 0.08030352 0.048162133 prediction 0.492477129593885 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46960866 chr16:46960867 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_66619 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:46960837-46960868
64251 chr11 47587452 47587452 1 + C T rs11537751 47587450 + 47587430 47587470 41 TTGCTGAGCCACCTCTTTGCCTCGGCAGCTGGTACAGGACG TTGCTGAGCCACCTCTTTGCCTTGGCAGCTGGTACAGGACG < 41bp 0.783109988634151 0.536896250829607 0.030417114 0.019657463 prediction 0.492427475609087 Functional Loss - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47587450 chr11:47587452 nonsynonymous SNV 0.988 3 23 hm5C_associated_SNPs_66629 0 1 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47587439-47587466
64251 chr6 151789675 151789675 1 + C T UCEC 151789673 + 151789653 151789693 41 CTACTAGAGTGTATATTGTTCTCGATAATTCTGGATTTGAG CTACTAGAGTGTATATTGTTCTTGATAATTCTGGATTTGAG < 41bp 0.746206912301711 0.465813790608136 0.20865369 0.020391703 prediction 0.492413824603421 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151789673 chr6:151789675 synonymous SNV . 0 23 hm5C_associated_SNPs_66631 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:151789646-151789686
64251 chr17 80521412 80521412 1 + C T STAD 80521410 + 80521390 80521430 41 ATCAGCCCTCTGCCCTCCCCCACGGGAACCATCAGGTGCGG ATCAGCCCTCTGCCCTCCCCCATGGGAACCATCAGGTGCGG < 41bp 0.789066323476374 0.542862275184465 0.08851105 0.054988652 prediction 0.492408096583818 Functional Loss - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80521410 chr17:80521412 nonsynonymous SNV 0.733 5 23 hm5C_associated_SNPs_66632 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80521376-80521414
64251 chr10 77167702 77167702 1 + A C rs528155123 77167698 + 77167678 77167718 41 TCAAGAAAGCTTGGGGACAGCTCCATGTTCCTTGGGGCGGA TCAAGAAAGCTTGGGGACAGCTCCCTGTTCCTTGGGGCGGA < 41bp 0.746202695184504 0.348917741214731 0.9285086 0.21410894 prediction 0.492405390369008 Functional Loss - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167698 chr10:77167702 . . 0 25 hm5C_associated_SNPs_66634 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:77167700-77167720
64251 chr8 87541223 87541223 1 + G T STAD 87541220 + 87541200 87541240 41 TGCTTGAATCCCCAATTTTCCAAGACATTTATTATTGATTA TGCTTGAATCCCCAATTTTCCAATACATTTATTATTGATTA < 41bp 0.746197777875043 0.385811665964563 0.52079046 0.1295022 prediction 0.492395555750085 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87541220 chr8:87541223 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_66637 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:87541223-87541248
64251 chr5 179155759 179155759 1 + C T rs189975498 179155757 + 179155737 179155777 41 TTCAGAAAACTTCAAGACATCACCATCAGCAGGCTCCAGTT TTCAGAAAACTTCAAGACATCATCATCAGCAGGCTCCAGTT < 41bp 0.785965967326489 0.539770191525552 0.004278451 0.0041168034 prediction 0.492391551601875 Functional Loss - CANX ENSG00000127022 UTR3 Human protein_coding chr5:179155757 chr5:179155759 . . 0 23 hm5C_associated_SNPs_66639 0 0 52 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179155598-179155917
64251 chr17 40766300 40766300 1 + C T STAD 40766298 + 40766278 40766318 41 GTGGCCAGCGTGAGGAAGACCACGGTCCTGGATGTCATGAG GTGGCCAGCGTGAGGAAGACCATGGTCCTGGATGTCATGAG < 41bp 0.806944692254896 0.560759656090302 0.8396869 0.51686656 prediction 0.492370072329188 Functional Loss - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40766298 chr17:40766300 nonsynonymous SNV 0.975 3 23 hm5C_associated_SNPs_66646 0 0 1 DGCR8 POSTAR2 ENCODE chr17:40766276-40766307
64251 chr2 99234698 99234698 1 + G T SARC 99234695 + 99234675 99234715 41 GCACCTCTGATTCTGCTCTACGGGCTTTCCCTGGCACTGGG GCACCTCTGATTCTGCTCTACGGTCTTTCCCTGGCACTGGG < 41bp 0.74618310498772 0.358336069055869 0.31005126 0.11964646 prediction 0.492366209975439 Functional Loss - UNC50 ENSG00000115446 CDS Human protein_coding chr2:99234695 chr2:99234698 synonymous SNV . 0 24 hm5C_associated_SNPs_66648 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:99234674-99234716
64251 chr19 9490252 9490252 1 + G T SARC 9490250 + 9490230 9490270 41 TCTCCAAGGTGGATCAAGAACAGCTGAAGACAGATGAAAGA TCTCCAAGGTGGATCAAGAACATCTGAAGACAGATGAAAGA < 41bp 0.746171032812763 0.400346449853503 0.74316764 0.1295631 prediction 0.492342065625525 Functional Loss - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9490250 chr19:9490252 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_66654 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:9490234-9490255
64251 chr9 95874555 95874555 1 + G T KIRP 95874553 + 95874533 95874573 41 CTGTGGGACTGGCCCTGCTCCTGTACTGCTATCCGCCAGGT CTGTGGGACTGGCCCTGCTCCTTTACTGCTATCCGCCAGGT < 41bp 0.746164127364644 0.411618608309669 0.23450094 0.1148963 prediction 0.492328254729288 Functional Loss - CARD19 ENSG00000165233 CDS Human protein_coding chr9:95874553 chr9:95874555 synonymous SNV . 0 23 hm5C_associated_SNPs_66655 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:95874507-95874555
64251 chr11 67258296 67258296 1 + C T COAD 67258294 + 67258274 67258314 41 ACTTCAAGCGGGGCAAGGCCCACGCGGCCGTGTGGAATGCC ACTTCAAGCGGGGCAAGGCCCATGCGGCCGTGTGGAATGCC < 41bp 0.767768033482646 0.521617942127528 0.21526924 0.17592514 prediction 0.492300182710236 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67258294 chr11:67258296 synonymous SNV . 0 23 hm5C_associated_SNPs_66660 0 0 1 PRPF8 POSTAR2 ENCODE chr11:67258244-67258298
64251 chr3 101520480 101520480 1 + G T UCEC 101520477 + 101520457 101520497 41 GTGGGCAGGGTGGTGGATTACCAGAATGGGTTTTACAAGGT GTGGGCAGGGTGGTGGATTACCATAATGGGTTTTACAAGGT < 41bp 0.746149147334932 0.368253251390457 0.33121383 0.20305705 prediction 0.492298294669863 Functional Loss - NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101520477 chr3:101520480 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_66661 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:101520430-101520487
64251 chr19 3531803 3531803 1 + C T COAD 3531801 + 3531781 3531821 41 CTGTCCATGTTGGAGGGCCACACGGCACGCGTCGGTGAGGA CTGTCCATGTTGGAGGGCCACATGGCACGCGTCGGTGAGGA < 41bp 0.769934682900781 0.523785786800327 0.08147642 0.17164591 prediction 0.492297792200907 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3531801 chr19:3531803 nonsynonymous SNV 0.914 3 23 hm5C_associated_SNPs_66662 0 0 2 PPIG POSTAR2 ENCODE chr19:3531771-3531814
64251 chr15 76630667 76630667 1 + G T PAAD 76630665 + 76630645 76630685 41 CTGGTGATGAGGGCGCGGGACAGCGTGTACCACATCGAGTG CTGGTGATGAGGGCGCGGGACATCGTGTACCACATCGAGTG < 41bp 0.746142231397459 0.393908976700678 0.36195755 0.45892817 prediction 0.492284462794918 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630665 chr15:76630667 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_66665 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:76630607-76630670
64251 chr17 7339584 7339584 1 + G C BLCA 7339583 + 7339563 7339603 41 CTGCTTCGTGGTGGGATTCGCGAGGGCTCCCTGGATCTGGG CTGCTTCGTGGTGGGATTCGCCAGGGCTCCCTGGATCTGGG < 41bp 0.86512109828837 0.6189811260724 0.9253525 0.8321074 prediction 0.492279944431939 Functional Loss - TMEM102 ENSG00000181284 CDS Human protein_coding chr17:7339583 chr17:7339584 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_66666 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7339570-7339606
64251 chr1 65858468 65858468 1 + G T LUAD 65858465 + 65858445 65858485 41 AGTGGAAGATGTGTTTCATCCTAGTGGACCTGCGTCTACCC AGTGGAAGATGTGTTTCATCCTATTGGACCTGCGTCTACCC < 41bp 0.746125612871181 0.350388800829193 0.31420726 0.06799936 prediction 0.492251225742363 Functional Loss - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65858465 chr1:65858468 nonsynonymous SNV 0.514 2 24 hm5C_associated_SNPs_66670 0 0 1 METAP2 POSTAR2 ENCODE chr1:65858387-65858488
64251 chr19 16345076 16345076 1 + C T PRAD 16345074 + 16345054 16345094 41 GCCCTGGGTGCGTTATATCACGCAGAATGGAGGTGAGTGAG GCCCTGGGTGCGTTATATCACGTAGAATGGAGGTGAGTGAG < 41bp 0.753091767637143 0.506971678069832 0.42693037 0.7786021 prediction 0.492240179134622 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16345074 chr19:16345076 stopgain 0.833 1 23 hm5C_associated_SNPs_66674 0 0 3 GRWD1 POSTAR2 ENCODE chr19:16345004-16345083
64251 chr22 18073013 18073013 1 + A C rs146621919 18073009 + 18072989 18073029 41 AGTGTTTTGACTAGACAGAGCTGGAGGTCAAGTCCCTGCGC AGTGTTTTGACTAGACAGAGCTGGCGGTCAAGTCCCTGCGC < 41bp 0.916539094972587 0.670420596667006 0.6575145 0.69300824 prediction 0.492236996611161 Functional Loss - SLC25A18 ENSG00000182902 UTR3 Human protein_coding chr22:18073009 chr22:18073013 . . 0 25 hm5C_associated_SNPs_66676 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr22:18072993-18073014
64251 chr16 31123564 31123564 1 + G T BRCA 31123562 + 31123542 31123582 41 CGGCTCCGCCACATCGATGGCCGGGAGGAAAGCTTCCGGAT CGGCTCCGCCACATCGATGGCCTGGAGGAAAGCTTCCGGAT < 41bp 0.746117615674392 0.40542344430216 0.8948773 0.33324036 prediction 0.492235231348785 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31123562 chr16:31123564 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_66678 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:31123549-31123604
64251 chr10 12129620 12129620 1 + C T rs12265659 12129618 + 12129598 12129638 41 AAAGCATGATGGGCTTTTTCCACGAGCTGCTGAAAATGTCG AAAGCATGATGGGCTTTTTCCATGAGCTGCTGAAAATGTCG < 41bp 0.83073023207738 0.584612829340477 0.86487246 0.66406417 prediction 0.492234805473806 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12129618 chr10:12129620 synonymous SNV . 0 23 hm5C_associated_SNPs_66679 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:12129600-12129620
64251 chr19 42791187 42791187 1 + G T BLCA 42791184 + 42791164 42791204 41 CTGAGTCGGCAGCTGTTGCTCATGAACGGCCACCAGGTGGG CTGAGTCGGCAGCTGTTGCTCATTAACGGCCACCAGGTGGG < 41bp 0.746110298000374 0.349966666445433 0.3974042 0.08969498 prediction 0.492220596000747 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791184 chr19:42791187 stopgain 0.983 0 24 hm5C_associated_SNPs_66681 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr19:42791187-42791215
64251 chr1 210411368 210411368 1 + A C UCEC 210411364 + 210411344 210411384 41 CATTGTCTCGGAAGGAGCTGCTGAAATTGCTGGGTACCAAA CATTGTCTCGGAAGGAGCTGCTGACATTGCTGGGTACCAAA < 41bp 0.746106619043604 0.326265797035779 0.2561739 0.20238414 prediction 0.492213238087208 Functional Loss - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210411364 chr1:210411368 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_66683 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:210411306-210411405
64251 chrX 147024827 147024827 1 + C T BRCA 147024825 + 147024805 147024845 41 GAAATAGGGGGCACGGCAGACGCGGTCCTGGATATACTTCA GAAATAGGGGGCACGGCAGACGTGGTCCTGGATATACTTCA < 41bp 0.789649113135605 0.543549693678026 0.6941029 0.45323873 prediction 0.492198838915158 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147024825 chrX:147024827 synonymous SNV . 0 23 hm5C_associated_SNPs_66687 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147024640-147024840
64251 chr5 131939124 131939124 1 + T C STAD 131939123 + 131939103 131939143 41 ACTCTTGGGTACAATAATGCCTGAAGAAGAAAGTGCCAAAG ACTCTTGGGTACAATAATGCCCGAAGAAGAAAGTGCCAAAG < 41bp 0.752295525651492 0.506198277053624 0.045936406 0.08067998 prediction 0.492194497195736 Functional Loss - RAD50 ENSG00000113522 CDS Human protein_coding chr5:131939123 chr5:131939124 synonymous SNV . 0 22 hm5C_associated_SNPs_66688 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr5:131939098-131939126
64251 chr2 231947621 231947621 1 + G T LUAD 231947618 + 231947598 231947638 41 TCGTTAGACACGGTGGCAGTCTGGGCCTTGGTTTGGCAGCC TCGTTAGACACGGTGGCAGTCTGTGCCTTGGTTTGGCAGCC < 41bp 0.746091517337871 0.360160574896223 0.8630549 0.11153269 prediction 0.492183034675742 Functional Loss - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231947618 chr2:231947621 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66690 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:231947606-231947657
64251 chr22 23438376 23438376 1 + C T COAD 23438374 + 23438354 23438394 41 AACGACCTGGAGCGCATCGCCGCAGCTGACTATATCCCCAC AACGACCTGGAGCGCATCGCCGTAGCTGACTATATCCCCAC < 41bp 0.777662795871353 0.531581799255229 0.5247385 0.4652152 prediction 0.492161993232248 Functional Loss - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438374 chr22:23438376 nonsynonymous SNV 0.289 3 23 hm5C_associated_SNPs_66691 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:23438339-23438409
64251 chr1 113615835 113615835 1 + G C rs146686899 113615834 + 113615814 113615854 41 AGGGGCGGACGAGAGGTGTCCGTCAGGCCGTGTGTCCCAGG AGGGGCGGACGAGAGGTGTCCCTCAGGCCGTGTGTCCCAGG < 41bp 0.839389976725779 0.59331605394817 0.18131116 0.1188128 prediction 0.492147845555218 Functional Loss - LRIG2 ENSG00000198799 UTR5 Human protein_coding chr1:113615834 chr1:113615835 . . 0 22 hm5C_associated_SNPs_66693 0 0 1 NCBP2 POSTAR2 ENCODE chr1:113615835-113615901
64251 chr1 226016558 226016558 1 + G A rs3738046 226016555 + 226016535 226016575 41 GCCAGGCACGAGGTCCGCAGCCAGGGAGGACGACAGCATCC GCCAGGCACGAGGTCCGCAGCCAAGGAGGACGACAGCATCC < 41bp 0.761785385754264 0.515717724642813 0.40929776 0.2802238 prediction 0.492135322222902 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016555 chr1:226016558 nonsynonymous SNV 0.179 0 24 hm5C_associated_SNPs_66694 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:226016537-226016595
64251 chr1 67724274 67724274 1 + G T UCEC 67724271 + 67724251 67724291 41 GAACACAAGCCTACAGACTACAAGAAGGAGAATACAGGACC GAACACAAGCCTACAGACTACAATAAGGAGAATACAGGACC < 41bp 0.746063093743456 0.42968010452674 0.18662277 0.047332585 prediction 0.492126187486913 Functional Loss - IL23R ENSG00000162594 CDS Human protein_coding chr1:67724271 chr1:67724274 nonsynonymous SNV 0.037 2 24 hm5C_associated_SNPs_66695 0 0 3 IGF2BP1 POSTAR2 ENCODE chr1:67724219-67724323
64251 chr4 154523780 154523780 1 + A T UCEC 154523776 + 154523756 154523796 41 ACCTAGAATTTCGCTTCACTCTCAATGTGACTCTCCCTCAT ACCTAGAATTTCGCTTCACTCTCATTGTGACTCTCCCTCAT < 41bp 0.886846055971216 0.640784867626672 0.20871142 0.10234454 prediction 0.492122376689087 Functional Loss - TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154523776 chr4:154523780 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_66696 0 0 1 ZNF622 POSTAR2 ENCODE chr4:154523736-154523780
64251 chr7 128445821 128445821 1 + G T UCEC 128445818 + 128445798 128445838 41 TTCCATTTCCCACATAGTGTCAGGAATTGTGTTGTGAGTTG TTCCATTTCCCACATAGTGTCAGTAATTGTGTTGTGAGTTG < 41bp 0.746039089357233 0.35136190602424 0.435879 0.029004961 prediction 0.492078178714467 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128445818 chr7:128445821 stopgain 0.139 0 24 hm5C_associated_SNPs_66699 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:128445815-128445845
64251 chr16 2258298 2258298 1 + C T UCEC 2258296 + 2258276 2258316 41 GACTAAGATCCCTGCCCACACGCGCTACGCCCTGCAGTGTC GACTAAGATCCCTGCCCACACGTGCTACGCCCTGCAGTGTC < 41bp 0.762521550898536 0.516486225985246 0.1586349 0.30821115 prediction 0.492070649826579 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258296 chr16:2258298 nonsynonymous SNV 0.792 4 23 hm5C_associated_SNPs_66701 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:2258260-2258300
64251 chr18 48252450 48252450 1 + A C SKCM 48252449 + 48252429 48252469 41 CCCTGAGGACGAGCCCACCTCACAACACCCCTTCCGCATTG CCCTGAGGACGAGCCCACCTCCCAACACCCCTTCCGCATTG < 41bp 0.771440148077951 0.525406772546795 0.03860593 0.04208827 prediction 0.492066751062312 Functional Loss - MAPK4 ENSG00000141639 CDS Human protein_coding chr18:48252449 chr18:48252450 synonymous SNV . 0 22 hm5C_associated_SNPs_66703 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:48252441-48252464
64251 chr1 54360171 54360171 1 + G A rs35678003 54360168 + 54360148 54360188 41 GGGGGTCTGGCCCCAAACTGCCCGGTGGTCCGCCTCTCAGG GGGGGTCTGGCCCCAAACTGCCCAGTGGTCCGCCTCTCAGG < 41bp 0.762914492336802 0.516887290060459 0.77459717 0.24822286 prediction 0.492054404552686 Functional Loss - DIO1 ENSG00000211452 CDS Human protein_coding chr1:54360168 chr1:54360171 synonymous SNV 0.416 0 24 hm5C_associated_SNPs_66705 0 0 1 SND1 POSTAR2 ENCODE chr1:54360115-54360193
64251 chr1 14104971 14104971 1 + C T SKCM 14104969 + 14104949 14104989 41 CACTTGAGCAGCCGGCCACCCTCCAGGAGGTGGCCAGTCAG CACTTGAGCAGCCGGCCACCCTTCAGGAGGTGGCCAGTCAG < 41bp 0.816979992001091 0.570967670472231 0.9472749 0.23738983 prediction 0.49202464305772 Functional Loss - PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14104969 chr1:14104971 synonymous SNV . 0 23 hm5C_associated_SNPs_66710 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:14104971-14104972
64251 chr10 79814352 79814352 1 + G C CESC 79814348 + 79814328 79814368 41 ATTTCCCAGGAAGAGAGATGCACAGATGTGAAGAACTCGAA ATTTCCCAGGAAGAGAGATGCACACATGTGAAGAACTCGAA < 41bp 0.746011004516713 0.45615597132509 0.37112895 0.07572812 prediction 0.492022009033425 Functional Loss - RPS24 ENSG00000138326 CDS Human protein_coding chr10:79814348 chr10:79814352 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_66711 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:79814326-79814357
64251 chr4 755105 755105 1 + C T UCEC 755103 + 755083 755123 41 AGTGTAACAGCAGCAAACTGCGCGGGCTGAAGCGGAAGTGG AGTGTAACAGCAGCAAACTGCGTGGGCTGAAGCGGAAGTGG < 41bp 0.784788742711532 0.538779949159675 0.63041186 0.5068865 prediction 0.492017587103713 Functional Loss - PCGF3 ENSG00000185619 CDS Human protein_coding chr4:755103 chr4:755105 synonymous SNV . 0 23 hm5C_associated_SNPs_66712 0 0 2 DDX24 POSTAR2 ENCODE chr4:755068-755119
64251 chr11 375934 375934 1 + C T UCEC 375932 + 375912 375952 41 GTGGTCAAGGACTTCCCGATCGCCAGATACCAGGGCCTGCA GTGGTCAAGGACTTCCCGATCGTCAGATACCAGGGCCTGCA < 41bp 0.797612635704481 0.551603843713779 0.89381504 0.6075984 prediction 0.492017583981404 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:375932 chr11:375934 nonsynonymous SNV 0.036 2 23 hm5C_associated_SNPs_66713 0 0 1 DDX24 POSTAR2 ENCODE chr11:375926-375949
64251 chr19 14517251 14517251 1 + G A LGG 14517248 + 14517228 14517268 41 AGCTCTACTTTCTTGTGGTGCGCGTGTTCCAAGGCCAGGGC AGCTCTACTTTCTTGTGGTGCGCATGTTCCAAGGCCAGGGC < 41bp 0.760207304001916 0.514206594782923 0.26437405 0.1798903 prediction 0.492001418437985 Functional Loss - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14517248 chr19:14517251 nonsynonymous SNV 0.970 2 24 hm5C_associated_SNPs_66718 0 0 2 SND1 POSTAR2 ENCODE chr19:14517234-14517295
64251 chr15 79603665 79603665 1 + G T LUSC 79603663 + 79603643 79603683 41 CTGCGCCGGGCCGAGCAGCCCTGCGGGGCCGAGCTCACCTT CTGCGCCGGGCCGAGCAGCCCTTCGGGGCCGAGCTCACCTT < 41bp 0.896121619792264 0.65012567397742 0.732723 0.38593274 prediction 0.491991891629689 Functional Loss - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79603663 chr15:79603665 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_66720 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr15:79603664-79603665
64251 chr6 4952539 4952539 1 + C T GBM 4952537 + 4952517 4952557 41 CAGTGGACGGAAGCTGACAGCGCAGGAGGCGTGTGGCAAGG CAGTGGACGGAAGCTGACAGCGTAGGAGGCGTGTGGCAAGG < 41bp 0.745984036741106 0.482420870844099 0.73445857 0.7707027 prediction 0.491968073482213 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4952537 chr6:4952539 stopgain 0.918 1 23 hm5C_associated_SNPs_66726 0 0 5 FMR1 POSTAR2 ENCODE chr6:4952516-4952616
64251 chr4 4322395 4322395 1 + C T SKCM 4322393 + 4322373 4322413 41 GTTTTGGGGGATCAGGTGACCTCCGCAGGCATGTCCGCACT GTTTTGGGGGATCAGGTGACCTTCGCAGGCATGTCCGCACT < 41bp 0.745975286319414 0.463492865866125 0.67289555 0.29334348 prediction 0.491950572638829 Functional Loss - ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4322393 chr4:4322395 synonymous SNV . 0 23 hm5C_associated_SNPs_66731 0 0 1 BUD13 POSTAR2 ENCODE chr4:4322356-4322421
64251 chr8 123964442 123964442 1 + G T LUSC 123964440 + 123964420 123964460 41 GAGATCCTCTCGAGACTCGGCGGGGTGGAGCTCCTCCAAGA GAGATCCTCTCGAGACTCGGCGTGGTGGAGCTCCTCCAAGA < 41bp 0.886711748665399 0.640736977309936 0.9294783 0.46402827 prediction 0.491949542710926 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964440 chr8:123964442 nonsynonymous SNV 0.023 0 23 hm5C_associated_SNPs_66732 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:123964433-123964456
64251 chr4 39064503 39064503 1 + G T UCEC 39064501 + 39064481 39064521 41 GGTCCAGCCAACTGGATTTTCAGAATTCACCTTCTTGGCCA GGTCCAGCCAACTGGATTTTCATAATTCACCTTCTTGGCCA < 41bp 0.878735468264078 0.632760760600249 0.468235 0.1913867 prediction 0.491949415327658 Functional Loss - KLHL5 ENSG00000109790 CDS Human protein_coding chr4:39064501 chr4:39064503 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_66733 0 0 1 RBM15 POSTAR2 ENCODE chr4:39064314-39064611
64251 chr1 162336953 162336953 1 + C T rs34398505 162336951 + 162336931 162336971 41 CTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGC CTGCATTCGCCGCCGCTGGGCGTGGGCTTGGCTGACTTTGC < 41bp 0.745970393632466 0.494977269646105 0.8439131 0.88716733 prediction 0.491940787264933 Functional Loss - NOS1AP ENSG00000198929;ENSG00000254706 CDS Human other chr1:162336951 chr1:162336953 nonsynonymous SNV 0.959 0 23 hm5C_associated_SNPs_66736 1 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162336927-162336965
64251 chr9 114659381 114659381 1 + A C rs538512226 114659377 + 114659357 114659397 41 CCCCCTCCGCCCTTTCCTCTCCCCACCTTCCTCTCGCCTCC CCCCCTCCGCCCTTTCCTCTCCCCCCCTTCCTCTCGCCTCC < 41bp 0.745964535873429 0.415365396802049 0.112382114 0.11772388 prediction 0.491929071746859 Functional Loss - UGCG ENSG00000148154 UTR5 Human protein_coding chr9:114659377 chr9:114659381 . . 0 25 hm5C_associated_SNPs_66739 0 0 11 EIF3A POSTAR2 GSE65004,GSM1585664 chr9:114659365-114659392
64251 chr3 47452816 47452816 1 + G T GBM 47452814 + 47452794 47452834 41 AGAGGCTGCGGCAGTTGCAGCAGGAGCTGGAGGCCTTTCGG AGAGGCTGCGGCAGTTGCAGCATGAGCTGGAGGCCTTTCGG < 41bp 0.893544006286329 0.647581549204568 0.9118886 0.31582904 prediction 0.491924914163522 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47452814 chr3:47452816 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_66740 0 0 3 RBM15 POSTAR2 ENCODE chr3:47452802-47452889
64251 chr1 40704062 40704062 1 + G T COAD 40704060 + 40704040 40704080 41 GTTGAAAGGTGATTGTTCTGCAGAACTTGGAGGTGATCCCA GTTGAAAGGTGATTGTTCTGCATAACTTGGAGGTGATCCCA < 41bp 0.745958552706419 0.424290810755203 0.3486642 0.10152659 prediction 0.491917105412838 Functional Loss - RLF ENSG00000117000 CDS Human protein_coding chr1:40704060 chr1:40704062 stopgain 0.945 0 23 hm5C_associated_SNPs_66741 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:40704015-40704072
64251 chr6 117201750 117201750 1 + C T UCEC 117201748 + 117201728 117201768 41 ATGTGAAGGAGTTTGCTTACCACGGTGCATTCTTTATGCAC ATGTGAAGGAGTTTGCTTACCATGGTGCATTCTTTATGCAC < 41bp 0.745958405772429 0.479785716529186 0.27967536 0.20300421 prediction 0.491916811544857 Functional Loss - RFX6 ENSG00000185002 CDS Human protein_coding chr6:117201748 chr6:117201750 nonsynonymous SNV 0.983 5 23 hm5C_associated_SNPs_66742 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:117201732-117201770
64251 chr7 100210514 100210514 1 + G C ESCA 100210510 + 100210490 100210530 41 CCTCCCTTGGGACCCGTTGTCCCGGTCCTGGTCTTTCCCCC CCTCCCTTGGGACCCGTTGTCCCGCTCCTGGTCTTTCCCCC < 41bp 0.801787220611484 0.555840354262391 0.84063613 0.3166165 prediction 0.491893732698187 Functional Loss - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100210510 chr7:100210514 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_66743 0 0 1 DDX3X POSTAR2 ENCODE chr7:100210507-100210562
64251 chr13 115002285 115002285 1 + G T PAAD 115002282 + 115002262 115002302 41 TTTTCCCTCCAGAAGAACCCCAGGACATCTATTGGTTGGCT TTTTCCCTCCAGAAGAACCCCAGTACATCTATTGGTTGGCT < 41bp 0.745944280900315 0.366580945545123 0.497824 0.15285662 prediction 0.49188856180063 Functional Loss - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115002282 chr13:115002285 nonsynonymous SNV 0.791 4 24 hm5C_associated_SNPs_66745 0 0 15 BUD13 POSTAR2 ENCODE chr13:115002260-115002308
64251 chr3 44442728 44442728 1 + G T PRAD 44442725 + 44442705 44442745 41 GCTCCAAGCTTGCATGAACTCGGGCATTTTAATATTCCAAC GCTCCAAGCTTGCATGAACTCGGTCATTTTAATATTCCAAC < 41bp 0.74593561640954 0.36316292826777 0.65224236 0.20203137 prediction 0.491871232819081 Functional Loss - TCAIM ENSG00000179152 CDS Human protein_coding chr3:44442725 chr3:44442728 synonymous SNV . 0 24 hm5C_associated_SNPs_66748 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:44442709-44442755
64251 chr20 32436358 32436358 1 + G T SARC 32436356 + 32436336 32436376 41 CATTATCAACCATCGAGTTCCAGCGGGAGGCCCTGGAGAAT CATTATCAACCATCGAGTTCCATCGGGAGGCCCTGGAGAAT < 41bp 0.745934674854953 0.397711895785086 0.42268556 0.082948714 prediction 0.491869349709906 Functional Loss - CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32436356 chr20:32436358 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_66749 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:32436340-32436360
64251 chr6 7590554 7590554 1 + G C LUSC 7590553 + 7590533 7590573 41 CAGGAGGAGCTGAACGAGTTCGTGGAGAGCGGCTGCCGGAC CAGGAGGAGCTGAACGAGTTCCTGGAGAGCGGCTGCCGGAC < 41bp 0.745934526152019 0.469303478329942 0.8727634 0.5771725 prediction 0.491869052304039 Functional Loss - SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7590553 chr6:7590554 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_66750 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:7590541-7590586
64251 chr1 32568247 32568247 1 + G T UCEC 32568245 + 32568225 32568265 41 ACTCATACTCTGCTAGCCCCCAGAGAGACCTGGACCACCGT ACTCATACTCTGCTAGCCCCCATAGAGACCTGGACCACCGT < 41bp 0.745912803303467 0.39793333953376 0.6295284 0.056491762 prediction 0.491825606606934 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32568245 chr1:32568247 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_66756 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32568225-32568247
64251 chr9 129642446 129642446 1 + G T UCEC 129642444 + 129642424 129642464 41 GCTGTTCCGACAGCTCCTCCCTGGGTGACGATGGGTACCAC GCTGTTCCGACAGCTCCTCCCTTGGTGACGATGGGTACCAC < 41bp 0.887753270308073 0.641843745033456 0.6987291 0.11086485 prediction 0.491819050549234 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642444 chr9:129642446 synonymous SNV . 0 23 hm5C_associated_SNPs_66757 0 0 1 DDX6 POSTAR2 ENCODE chr9:129642405-129642450
64251 chr19 39964988 39964988 1 + G T GBM 39964985 + 39964965 39965005 41 GCGCCAAGCCCAGCAGGCTACCAGAATACCCACTCCCCAGC GCGCCAAGCCCAGCAGGCTACCATAATACCCACTCCCCAGC < 41bp 0.745896206817202 0.366803458313647 0.2658323 0.051600188 prediction 0.491792413634403 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964985 chr19:39964988 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_66760 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:39964980-39965000
64251 chr11 64083221 64083221 1 + G C THCA 64083217 + 64083197 64083237 41 ATGCCGAGGCTGTGGAGCAGCTGCGAGAAGCTCTGCACGAG ATGCCGAGGCTGTGGAGCAGCTGCCAGAAGCTCTGCACGAG < 41bp 0.828337721045511 0.582464922135734 0.653852 0.25941017 prediction 0.491745597819555 Functional Loss - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64083217 chr11:64083221 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_66768 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64083194-64083235
64251 chr6 43029313 43029313 1 + C T UCEC 43029311 + 43029291 43029331 41 GTTCTATGGAAAACATTGAGCTCGGGCTGAGTGAGGCCCAG GTTCTATGGAAAACATTGAGCTTGGGCTGAGTGAGGCCCAG < 41bp 0.759151545459835 0.51328048698185 0.15812838 0.12979141 prediction 0.491742116955969 Functional Loss - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43029311 chr6:43029313 synonymous SNV . 0 23 hm5C_associated_SNPs_66769 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:43029299-43029320
64251 chr16 28507303 28507303 1 + C T SKCM 28507301 + 28507281 28507321 41 GGGGAGGAGGCTGAGACAGCCTCAGGCGGGGAGGAGGCTGA GGGGAGGAGGCTGAGACAGCCTTAGGCGGGGAGGAGGCTGA < 41bp 0.761549507869741 0.515681580415497 0.16339627 0.27115372 prediction 0.491735854908487 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507301 chr16:28507303 nonsynonymous SNV 0.014 1 23 hm5C_associated_SNPs_66772 0 0 1 DGCR8 POSTAR2 ENCODE chr16:28507270-28507312
64251 chr17 7157978 7157978 1 + G A UCEC 7157975 + 7157955 7157995 41 AGGCCTTTCCTGGGGGGCCGCTGGGAGCCTTGAGAGCCATG AGGCCTTTCCTGGGGGGCCGCTGAGAGCCTTGAGAGCCATG < 41bp 0.751884287185714 0.506017682433461 0.7896057 0.7742389 prediction 0.491733209504506 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7157975 chr17:7157978 nonsynonymous SNV 0.659 1 24 hm5C_associated_SNPs_66773 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7157945-7157995
64251 chr17 41352463 41352463 1 + G T GBM 41352460 + 41352440 41352480 41 GCGAGGTGCTGAAGGCAAGCCTGGGGTTGAGGCTGGGCAGG GCGAGGTGCTGAAGGCAAGCCTGTGGTTGAGGCTGGGCAGG < 41bp 0.921094905230397 0.675238440832699 0.8628057 0.34799296 prediction 0.491712928795396 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41352460 chr17:41352463 nonsynonymous SNV 0.954 0 24 hm5C_associated_SNPs_66777 0 0 4 FMR1 POSTAR2 ENCODE chr17:41352397-41352510
64251 chr2 101587484 101587484 1 + A C UCEC 101587480 + 101587460 101587500 41 ATGTCCGGGTGGAAAGGAGGCAGGAGCTGGCTCTGGAAGAC ATGTCCGGGTGGAAAGGAGGCAGGCGCTGGCTCTGGAAGAC < 41bp 0.921999004386435 0.676161042870621 0.8850415 0.81776875 prediction 0.491675923031629 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101587480 chr2:101587484 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_66785 0 0 3 PPIG POSTAR2 ENCODE chr2:101587444-101587543
64251 chrX 48436742 48436742 1 + C T rs782250316 48436740 + 48436720 48436760 41 GGGGGCAGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGA GGGGGCAGAGGTGGGCGGATCATCTGAGGTCAGGAGTTCGA < 41bp 0.747002469382188 0.501167564471044 0.6459438 0.5893773 prediction 0.491669809822288 Functional Loss - RBM3 ENSG00000102317 UTR3 Human protein_coding chrX:48436740 chrX:48436742 . . 0 23 hm5C_associated_SNPs_66787 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:48436716-48436752
64251 chr19 6750388 6750388 1 + C T ESCA 6750386 + 6750366 6750406 41 GCCCGGCCTCCCGACCCCCCCGCTAGCGCCCCGCCAGACAG GCCCGGCCTCCCGACCCCCCCGTTAGCGCCCCGCCAGACAG < 41bp 0.796916882238335 0.551089814470973 0.20884046 0.10568109 prediction 0.491654135534724 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750386 chr19:6750388 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_66789 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6750368-6750404
64251 chr5 162909750 162909750 1 + G T COAD 162909748 + 162909728 162909768 41 GGAAAAATGCAGAGGATGTTCAGCATCAGATTTTGGCAACT GGAAAAATGCAGAGGATGTTCATCATCAGATTTTGGCAACT < 41bp 0.868966591921027 0.623151598830894 0.16305971 0.07517186 prediction 0.491629986180265 Functional Loss - HMMR ENSG00000072571 CDS Human protein_coding chr5:162909748 chr5:162909750 nonsynonymous SNV 0.033 0 23 hm5C_associated_SNPs_66791 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:162909739-162909788
64251 chr17 8170704 8170704 1 + C T GBM 8170702 + 8170682 8170722 41 CCCCCAAGGTGGTCCCAGCCCCCGAGTCGCCATCTTGCGAG CCCCCAAGGTGGTCCCAGCCCCTGAGTCGCCATCTTGCGAG < 41bp 0.818962356786096 0.573174074979748 0.08502355 0.097507685 prediction 0.491576563612696 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170702 chr17:8170704 stopgain 0.950 1 23 hm5C_associated_SNPs_66795 0 0 1 SF3B4 POSTAR2 ENCODE chr17:8170649-8170709
64251 chr19 11559988 11559988 1 + A C BLCA 11559984 + 11559964 11560004 41 TGGCAGGGCCCCAACCGCTCCACCACCGTGAGTGCCTGCAA TGGCAGGGCCCCAACCGCTCCACCCCCGTGAGTGCCTGCAA < 41bp 0.745784075050056 0.316990290717588 0.1010125 0.034798622 prediction 0.491568150100112 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559984 chr19:11559988 nonsynonymous SNV 0.988 2 25 hm5C_associated_SNPs_66797 0 0 5 METAP2 POSTAR2 ENCODE chr19:11559938-11559990
64251 chr16 21416228 21416228 1 - G A rs568836414 21416230 - 21416210 21416250 41 ATGATAATCTCAAGACACCTCCCGAGTGTCTACTCACTCCC ATGATAATCTCAAGACACCTCCTGAGTGTCTACTCACTCCC < 41bp 0.745777624360678 0.465916532168799 0.23997185 0.1382778 prediction 0.491555248721355 Functional Loss - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416230 chr16:21416228 synonymous SNV . 0 23 hm5C_associated_SNPs_66800 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:21416199-21416228
64251 chr16 21416227 21416227 1 - C T UCEC 21416230 - 21416210 21416250 41 ATGATAATCTCAAGACACCTCCCGAGTGTCTACTCACTCCC ATGATAATCTCAAGACACCTCCCAAGTGTCTACTCACTCCC < 41bp 0.745777624360678 0.495207235180783 0.23997185 0.11574513 prediction 0.491555248721355 Functional Loss - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416230 chr16:21416227 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_66801 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:21416199-21416228
64251 chr12 72265927 72265927 1 + A T LUSC 72265923 + 72265903 72265943 41 TGACCAAGACGGCTTGATTTCAGGAATATTACGTGTTTTAG TGACCAAGACGGCTTGATTTCAGGTATATTACGTGTTTTAG < 41bp 0.859865727810389 0.614110786937639 0.89686257 0.8825221 prediction 0.491509881745501 Functional Loss - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72265923 chr12:72265927 synonymous SNV . 0 25 hm5C_associated_SNPs_66806 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:72265918-72265943
64251 chr11 9496156 9496156 1 + G T UCEC 9496154 + 9496134 9496174 41 ACAGTTAGAAGATGGTACCACAGCATTTATTCACCACACCT ACAGTTAGAAGATGGTACCACATCATTTATTCACCACACCT < 41bp 0.745749097352865 0.418941726635254 0.17324096 0.13906676 prediction 0.49149819470573 Functional Loss - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9496154 chr11:9496156 nonsynonymous SNV 0.981 4 23 hm5C_associated_SNPs_66809 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:9496140-9496160
64251 chr19 5661656 5661656 1 + A C UCEC 5661655 + 5661635 5661675 41 CAGCGGCTGGAGCGGGAGCGCATGGAGCGGGAACGGCTGGA CAGCGGCTGGAGCGGGAGCGCCTGGAGCGGGAACGGCTGGA < 41bp 0.74573229000582 0.49867897954063 0.8997971 0.90578365 prediction 0.491464580011639 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5661655 chr19:5661656 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_66814 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:5661655-5661656
64251 chr12 123892187 123892187 1 + C T SKCM 123892185 + 123892165 123892205 41 ACATCGCGGCTGGGGAGGAGCTCCTGTATGACTATGGGGAC ACATCGCGGCTGGGGAGGAGCTTCTGTATGACTATGGGGAC < 41bp 0.745727297092807 0.472460066440411 0.2385439 0.28999138 prediction 0.491454594185614 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892185 chr12:123892187 synonymous SNV . 0 23 hm5C_associated_SNPs_66815 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:123892150-123892191
64251 chr7 150741245 150741245 1 + C T SKCM 150741243 + 150741223 150741263 41 GCACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGTCCGT GCACGGTGCTGGTAATTGCCCATCGGCTCAGCACTGTCCGT < 41bp 0.745714866852897 0.493765051678616 0.039159954 0.06320357 prediction 0.491429733705794 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150741243 chr7:150741245 synonymous SNV . 0 23 hm5C_associated_SNPs_66821 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:150741240-150741260
64251 chr11 66262739 66262739 1 + G T UCEC 66262737 + 66262717 66262757 41 TCAACCCAGAGACGGGCGAGCAGGTGAGGGAGGCCTCAGCA TCAACCCAGAGACGGGCGAGCATGTGAGGGAGGCCTCAGCA < 41bp 0.745710730828472 0.382217546601755 0.91412956 0.7712829 prediction 0.491421461656944 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262737 chr11:66262739 nonsynonymous SNV 0.973 0 23 hm5C_associated_SNPs_66823 0 0 4 PPIG POSTAR2 ENCODE chr11:66262697-66262742
64251 chr11 118486878 118486878 1 + T C LIHC 118486877 + 118486857 118486897 41 CTCTACCCCTGTGGCAATGCCTGCACTATTGATGGGCTCCC CTCTACCCCTGTGGCAATGCCCGCACTATTGATGGGCTCCC < 41bp 0.76947302522332 0.523772506341361 0.13114041 0.106940866 prediction 0.491401037763919 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118486877 chr11:118486878 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_66826 0 0 1 DDX24 POSTAR2 ENCODE chr11:118486839-118486925
64251 chr1 114483926 114483926 1 + G T OV 114483923 + 114483903 114483943 41 GCCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGATCCA GCCACAGCCTTGATGAAGCTCAATAGTCTTGGTCTGATCCA < 41bp 0.745694840153226 0.360865563726839 0.8352492 0.27383977 prediction 0.491389680306452 Functional Loss - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114483923 chr1:114483926 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_66828 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:114483905-114483930
64251 chrX 55777611 55777611 1 + G T LUAD 55777608 + 55777588 55777628 41 TCTTGTTTCCGAACATCTATCTGGGATGAAACCCTCTATAA TCTTGTTTCCGAACATCTATCTGTGATGAAACCCTCTATAA < 41bp 0.916306151555 0.67061956047011 0.8925605 0.10573456 prediction 0.491373182169782 Functional Loss - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55777608 chrX:55777611 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66833 0 0 1 PPIG POSTAR2 ENCODE chrX:55777572-55777632
64251 chr5 60831405 60831405 1 + C T rs193297656 60831403 + 60831383 60831423 41 TCTTCACCTCTCTCCTACCTCACGATGCTGAATTGGCATAC TCTTCACCTCTCTCCTACCTCATGATGCTGAATTGGCATAC < 41bp 0.831009089107252 0.585323119143465 0.24840474 0.16412812 prediction 0.491371939927575 Functional Loss - ZSWIM6 ENSG00000130449 CDS Human protein_coding chr5:60831403 chr5:60831405 synonymous SNV . 0 23 hm5C_associated_SNPs_66834 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:60831378-60831406
64251 chr12 57485439 57485439 1 + G C HNSC 57485438 + 57485418 57485458 41 AGGAGAAGAGGAGGCTGGCTCGCCCCCCTTCTCCCCCCCTG AGGAGAAGAGGAGGCTGGCTCCCCCCCCTTCTCCCCCCCTG < 41bp 0.745683688762239 0.427096379836763 0.23386821 0.1963917 prediction 0.491367377524478 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485438 chr12:57485439 synonymous SNV . 0 22 hm5C_associated_SNPs_66836 0 0 2 GRSF1 POSTAR2 ENCODE chr12:57485416-57485508
64251 chr1 196648890 196648890 1 + G T LUSC 196648888 + 196648868 196648908 41 AAGAGGAGATGCTGTATGCACTGAATCTGGATGGCGTCCGT AAGAGGAGATGCTGTATGCACTTAATCTGGATGGCGTCCGT < 41bp 0.745676744864842 0.41871512105328 0.036332816 0.016193062 prediction 0.491353489729685 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196648888 chr1:196648890 stopgain 0.049 0 23 hm5C_associated_SNPs_66839 0 0 3 LIN28B POSTAR2 ENCODE chr1:196648840-196648923
64251 chr7 99226964 99226964 1 + G A LUSC 99226961 + 99226941 99226981 41 GCAGGAGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTC GCAGGAGCCTGGTGGCCCTGCAGACAGTGCGCCTGGGCTTC < 41bp 0.754411893682902 0.508751245224572 0.6433994 0.2607898 prediction 0.491321296916659 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99226961 chr7:99226964 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_66846 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:99226960-99226980
64251 chr17 16285291 16285291 1 + G C CESC 16285290 + 16285270 16285310 41 GTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAGAT GTGGAGCCCAGTGACACCATCCAAAATGTGAAGGCCAAGAT < 41bp 0.864432889775316 0.618777666702483 0.350178 0.15938324 prediction 0.491310446145666 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285290 chr17:16285291 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_66850 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:16285213-16285292
64251 chr16 57155644 57155644 1 + C T UCEC 57155642 + 57155622 57155662 41 AAGAAGAAGAACTATAAAAACTCGGGCATCATCATCCTGCG AAGAAGAAGAACTATAAAAACTTGGGCATCATCATCCTGCG < 41bp 0.825745673358823 0.580097389174762 0.24766657 0.21410239 prediction 0.491296568368121 Functional Loss - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57155642 chr16:57155644 nonsynonymous SNV 0.896 4 23 hm5C_associated_SNPs_66853 0 0 4 DDX24 POSTAR2 ENCODE chr16:57155625-57155684
64251 chr17 34964119 34964119 1 + A C UCEC 34964118 + 34964098 34964138 41 CCTTTCAGACCAAAGCCCAGCAGGGCTGGCTCGTGGCCGGC CCTTTCAGACCAAAGCCCAGCCGGGCTGGCTCGTGGCCGGC < 41bp 0.783346491023519 0.537699824126817 0.8946275 0.71702135 prediction 0.491293333793405 Functional Loss - MRM1 ENSG00000129282 CDS Human other chr17:34964118 chr17:34964119 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_66854 0 0 1 BUD13 POSTAR2 ENCODE chr17:34964087-34964171
64251 chr16 846984 846984 1 + C T rs531301865 846982 + 846962 847002 41 TGGATGGGAGCCCCCCAGGGCTCGAGGGTCTGCTGGGGGGC TGGATGGGAGCCCCCCAGGGCTTGAGGGTCTGCTGGGGGGC < 41bp 0.765445817773733 0.519813255942669 0.4064083 0.36441687 prediction 0.491265123662129 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:846982 chr16:846984 synonymous SNV . 0 23 hm5C_associated_SNPs_66860 0 0 1 LSM11 POSTAR2 ENCODE chr16:846961-846992
64251 chr1 228400286 228400286 1 - G A KIRC 228400288 - 228400268 228400308 41 CCGTCCTTCTTCCACACCGTCTCGGGCTTGGGCTCGCCGGT CCGTCCTTCTTCCACACCGTCTTGGGCTTGGGCTCGCCGGT < 41bp 0.749374054235722 0.503745394241866 0.09650326 0.1713863 prediction 0.491257319987713 Functional Loss - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228400288 chr1:228400286 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_66862 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228400269-228400301
64251 chr3 38407197 38407197 1 + C T LUAD 38407195 + 38407175 38407215 41 CTGTGGGTGGTGCTCAGGCTCTCAGCTGCCTCACGGGGTCC CTGTGGGTGGTGCTCAGGCTCTTAGCTGCCTCACGGGGTCC < 41bp 0.796118831262584 0.550492288910348 0.1095444 0.13423744 prediction 0.491253084704472 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38407195 chr3:38407197 synonymous SNV . 0 23 hm5C_associated_SNPs_66863 0 0 6 BUD13 POSTAR2 ENCODE chr3:38407114-38407219
64251 chr17 18793149 18793149 1 + G T KIRC 18793146 + 18793126 18793166 41 CTGTCACAGATCCCAGATTACAGGAATGCAGTAATCGTGGC CTGTCACAGATCCCAGATTACAGTAATGCAGTAATCGTGGC < 41bp 0.874064178133945 0.628437772292836 0.49670854 0.3163358 prediction 0.491252811682216 Functional Loss - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18793146 chr17:18793149 stopgain 1.000 1 24 hm5C_associated_SNPs_66864 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18793134-18793170
64251 chr2 96071347 96071347 1 + T C UCEC 96071346 + 96071326 96071366 41 GAAGGTTACTCACAGTTCTGCTGCAGGCTCAGAAGTGGCCC GAAGGTTACTCACAGTTCTGCCGCAGGCTCAGAAGTGGCCC < 41bp 0.745624519222206 0.497923667579213 0.11763409 0.10295579 prediction 0.491249038444412 Functional Loss - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96071346 chr2:96071347 nonsynonymous SNV 0.831 2 22 hm5C_associated_SNPs_66865 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:96071332-96071352
64251 chr11 44105286 44105286 1 + G T PAAD 44105283 + 44105263 44105303 41 AGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGT AGGTGCTTGCAGGCAAATCCCAATTGGCAGAAGACCCCCGT < 41bp 0.745619709217879 0.354882644572026 0.3524007 0.12803215 prediction 0.491239418435757 Functional Loss - ACCS ENSG00000110455 CDS Human protein_coding chr11:44105283 chr11:44105286 nonsynonymous SNV 0.022 0 24 hm5C_associated_SNPs_66868 0 0 1 LSM11 POSTAR2 ENCODE chr11:44105239-44105307
64251 chr6 151670468 151670468 1 + G T LUSC 151670465 + 151670445 151670485 41 TGGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGGATGA TGGCGCAAAAAGACCAGTTTCAGTAAGCCGAAGGAGGATGA < 41bp 0.745610534155956 0.367486608818009 0.8486092 0.2936581 prediction 0.491221068311913 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670465 chr6:151670468 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_66873 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:151670461-151670471
64251 chr9 124535443 124535443 1 + C T rs147657880 124535441 + 124535421 124535461 41 CTGGGAAGTTTCAGCACTGCCGCGGAGGAGCTGGCTCGGCG CTGGGAAGTTTCAGCACTGCCGTGGAGGAGCTGGCTCGGCG < 41bp 0.771951154500122 0.526342692660398 0.84809005 0.73881125 prediction 0.491216923679448 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535441 chr9:124535443 nonsynonymous SNV 0.795 0 23 hm5C_associated_SNPs_66874 0 0 2 PPIG POSTAR2 ENCODE chr9:124535418-124535465
64251 chr1 203830822 203830822 1 + A C STAD 203830818 + 203830798 203830838 41 GTGGCCAGGGTCAGAAAGTGCAGAAGGTTATGGTGCAGCCC GTGGCCAGGGTCAGAAAGTGCAGACGGTTATGGTGCAGCCC < 41bp 0.848957567312282 0.603353896326398 0.89107704 0.8900465 prediction 0.491207341971768 Functional Loss - SNRPE ENSG00000182004 CDS Human protein_coding chr1:203830818 chr1:203830822 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_66875 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:203830768-203830824
64251 chr12 69229704 69229704 1 + C T STAD 69229702 + 69229682 69229722 41 TAGAATTTGAAGTTGAATCTCTCGACTCAGAAGATTATAGC TAGAATTTGAAGTTGAATCTCTTGACTCAGAAGATTATAGC < 41bp 0.756466721691977 0.51086553115239 0.12765858 0.05322814 prediction 0.491202381079174 Functional Loss - MDM2 ENSG00000135679 CDS Human protein_coding chr12:69229702 chr12:69229704 synonymous SNV . 0 23 hm5C_associated_SNPs_66876 0 0 33 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:69229606-69229769
64251 chr2 47604206 47604206 1 + C T UCEC 47604204 + 47604184 47604224 41 CAACTGGATCCAAAATTTATCACGAGTATTTTGGTATGATT CAACTGGATCCAAAATTTATCATGAGTATTTTGGTATGATT < 41bp 0.791113327381194 0.545514975438085 0.20831886 0.19795308 prediction 0.491196703886218 Functional Loss - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47604204 chr2:47604206 nonsynonymous SNV 0.005 2 23 hm5C_associated_SNPs_66877 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:47604171-47604209
64251 chr19 36430917 36430917 1 + C T STAD 36430915 + 36430895 36430935 41 AACCTGCTGGCTTCTGTGCCCGCCGGCGCTTTTTCCCGCCT AACCTGCTGGCTTCTGTGCCCGTCGGCGCTTTTTCCCGCCT < 41bp 0.767362810876319 0.521769642698248 0.21562499 0.1109716 prediction 0.491186336356142 Functional Loss - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430915 chr19:36430917 nonsynonymous SNV 0.775 0 23 hm5C_associated_SNPs_66881 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36430879-36430917
64251 chr4 48343650 48343650 1 + G C rs569778728 48343649 + 48343629 48343669 41 GGCCTGGTCCTGCTATATGCCGGCGCCTCGGCTAGAGTGAG GGCCTGGTCCTGCTATATGCCCGCGCCTCGGCTAGAGTGAG < 41bp 0.745592144074081 0.465406127497898 0.9046034 0.29228866 prediction 0.491184288148163 Functional Loss - SLAIN2 ENSG00000109171 UTR5 Human protein_coding chr4:48343649 chr4:48343650 . . 0 22 hm5C_associated_SNPs_66882 0 0 1 DDX3X POSTAR2 ENCODE chr4:48343609-48343766
64251 chr16 88872235 88872235 1 + A T ACC 88872231 + 88872211 88872251 41 CCCACCTTCAAGGATGGCACCAGGAGGTCAGATTACCAGCT CCCACCTTCAAGGATGGCACCAGGTGGTCAGATTACCAGCT < 41bp 0.86520589806452 0.619619320636309 0.89133936 0.9030112 prediction 0.491173154856422 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88872231 chr16:88872235 nonsynonymous SNV 0.002 4 25 hm5C_associated_SNPs_66884 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88872194-88872241
64251 chr11 61563855 61563855 1 + A C CHOL 61563851 + 61563831 61563871 41 AAGGCAGCACCCAGGGCCGCCTGGATGATTTCTTCAAGGTG AAGGCAGCACCCAGGGCCGCCTGGCTGATTTCTTCAAGGTG < 41bp 0.745585763458909 0.335038699748684 0.39460647 0.16840446 prediction 0.491171526917818 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563851 chr11:61563855 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_66887 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:61563854-61563895
64251 chr1 2235813 2235813 1 + G T KICH 2235810 + 2235790 2235830 41 GGACCTGGGCTCCCCGGGTGCGCGTGCCCTGCCCTCGGCCG GGACCTGGGCTCCCCGGGTGCGCTTGCCCTGCCCTCGGCCG < 41bp 0.745574178461956 0.341970940604307 0.36216843 0.26266375 prediction 0.491148356923912 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2235810 chr1:2235813 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_66890 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:2235791-2235836
64251 chr16 720948 720948 1 + G C rs145947759 720944 + 720924 720964 41 GGCCCTGGAGGACGTGAAGACGGTGGTGTGCAGGAACGTGG GGCCCTGGAGGACGTGAAGACGGTCGTGTGCAGGAACGTGG < 41bp 0.820625506293239 0.575051792429996 0.7267304 0.6450366 prediction 0.491147427726487 Functional Loss - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:720944 chr16:720948 synonymous SNV . 0 25 hm5C_associated_SNPs_66891 0 0 4 GRWD1 POSTAR2 ENCODE chr16:720898-720952
64251 chr19 58146122 58146122 1 + G T LUAD 58146120 + 58146100 58146140 41 ACTTTGCACTTACGTCCTCCCTGGGTAAGGCCCTCATACTC ACTTTGCACTTACGTCCTCCCTTGGTAAGGCCCTCATACTC < 41bp 0.875023616621349 0.629458869721 0.2840309 0.007851481 prediction 0.4911294938007 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58146120 chr19:58146122 synonymous SNV . 0 23 hm5C_associated_SNPs_66892 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:58146086-58146124
64251 chr6 116914255 116914255 1 + A C UCEC 116914254 + 116914234 116914274 41 TGCTGACCCAGAGAGTGACTCAGCTGACTAATGGACTGTCC TGCTGACCCAGAGAGTGACTCCGCTGACTAATGGACTGTCC < 41bp 0.74556456666631 0.489658158280544 0.73226964 0.050408244 prediction 0.49112913333262 Functional Loss - RWDD1 ENSG00000111832 CDS Human protein_coding chr6:116914254 chr6:116914255 synonymous SNV . 0 22 hm5C_associated_SNPs_66893 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:116914163-116914289
64251 chr3 40353017 40353017 1 + G T SARC 40353015 + 40352995 40353035 41 CTGAATACGGAGAGGTTATTCAGCTTCAAGGTGACCAAAGA CTGAATACGGAGAGGTTATTCATCTTCAAGGTGACCAAAGA < 41bp 0.74556299092454 0.416637550095079 0.43129382 0.09544259 prediction 0.49112598184908 Functional Loss - EIF1B ENSG00000114784 CDS Human protein_coding chr3:40353015 chr3:40353017 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_66894 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:40352963-40353028
64251 chr11 134237200 134237200 1 + C T rs117422861 134237198 + 134237178 134237218 41 TACTGGACGGGGTGGTTTGACTCGTGGGGAGGCCCTCACAA TACTGGACGGGGTGGTTTGACTTGTGGGGAGGCCCTCACAA < 41bp 0.819278473642879 0.573735245808695 0.13617077 0.21356493 prediction 0.491086455668367 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134237198 chr11:134237200 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_66902 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:134237200-134237201
64251 chr15 85400935 85400935 1 + G A STAD 85400932 + 85400912 85400952 41 GTCCCAGGTGGGGGCAGCCACCGGAGGTCTGGTGCCCTCAG GTCCCAGGTGGGGGCAGCCACCGAAGGTCTGGTGCCCTCAG < 41bp 0.757295144632532 0.511753617286348 0.9108963 0.80219966 prediction 0.491083054692367 Functional Loss - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85400932 chr15:85400935 nonsynonymous SNV 0.002 2 24 hm5C_associated_SNPs_66903 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85400916-85400954
64251 chr14 105224174 105224174 1 + A C rs146621961 105224170 + 105224150 105224190 41 GCTGGCCTCCCACTCCTGCCCTGCACACCATCCTTGAGGGA GCTGGCCTCCCACTCCTGCCCTGCCCACCATCCTTGAGGGA < 41bp 0.745524712832619 0.364265590142939 0.066758454 0.08742964 prediction 0.491049425665238 Functional Loss - SIVA1 ENSG00000184990 intronic Human protein_coding chr14:105224170 chr14:105224174 . . 0 25 hm5C_associated_SNPs_66910 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr14:105224174-105224175
64251 chr12 14577448 14577448 1 + C T SKCM 14577446 + 14577426 14577466 41 GATGCCACTGCTGATGATCTCTCCTCTGGTGATCCCACCTC GATGCCACTGCTGATGATCTCTTCTCTGGTGATCCCACCTC < 41bp 0.745515430496947 0.481261636267802 0.040577292 0.023058861 prediction 0.491030860993894 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577446 chr12:14577448 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_66913 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14577351-14577468
64251 chr5 169020417 169020417 1 + C T UCEC 169020415 + 169020395 169020435 41 TTAGTGAAAAGCAGCTGAAGCACCAAGTAGATCATCAGAAG TTAGTGAAAAGCAGCTGAAGCATCAAGTAGATCATCAGAAG < 41bp 0.745513092756547 0.456713546507918 0.5468907 0.28604126 prediction 0.491026185513094 Functional Loss - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169020415 chr5:169020417 synonymous SNV . 0 23 hm5C_associated_SNPs_66915 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:169020347-169020429
64251 chr3 143708579 143708579 1 + G C LGG 143708575 + 143708555 143708595 41 ATTGCCAAAGATGGCCGGCTCGAGGCCTTGCTGGATGAGTG ATTGCCAAAGATGGCCGGCTCGAGCCCTTGCTGGATGAGTG < 41bp 0.806683574498528 0.561170943590186 0.7214403 0.21822724 prediction 0.491025261816685 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143708575 chr3:143708579 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_66916 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:143708562-143708601
64251 chr2 136396537 136396537 1 + C T STAD 136396535 + 136396515 136396555 41 ACTGAGAATGAGTTGAAGTACTCGGAACCACGACCCTGGAG ACTGAGAATGAGTTGAAGTACTTGGAACCACGACCCTGGAG < 41bp 0.82254506601772 0.577066451521443 0.09629509 0.11171478 prediction 0.490957228992555 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136396535 chr2:136396537 nonsynonymous SNV 0.962 0 23 hm5C_associated_SNPs_66927 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:136396506-136396571
64251 chr19 14574936 14574936 1 + C T PRAD 14574934 + 14574914 14574954 41 CAGCTCACCTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCC CAGCTCACCTCAGAAGAGCTCGTGGGATCCTCCTTCCAGCC < 41bp 0.783313906324491 0.537851727550851 0.6391419 0.7018836 prediction 0.490924357547281 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574934 chr19:14574936 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_66931 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr6 135507142 135507142 1 + G T UCEC 135507139 + 135507119 135507159 41 AAAGCGTCACTTGGGGAAAACAAGGTGGACCCGGGAAGAGG AAAGCGTCACTTGGGGAAAACAATGTGGACCCGGGAAGAGG < 41bp 0.745458060721827 0.417141605390155 0.9083588 0.19502604 prediction 0.490916121443653 Functional Loss - MYB ENSG00000118513 CDS Human protein_coding chr6:135507139 chr6:135507142 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_66934 0 0 7 DDX24 POSTAR2 ENCODE chr6:135507092-135507155
64251 chr9 128099784 128099784 1 + C T rs62637637 128099782 + 128099762 128099802 41 AAATGAAGAGCGAGAACTCCCTCCAGCTGCAGCCATTGGTG AAATGAAGAGCGAGAACTCCCTTCAGCTGCAGCCATTGGTG < 41bp 0.839568636895806 0.594110995960015 0.9233874 0.39484718 prediction 0.490915281871581 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128099782 chr9:128099784 nonsynonymous SNV 0.961 1 23 hm5C_associated_SNPs_66935 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:128099766-128099784
64251 chr12 54378956 54378956 1 + A C rs542271198 54378952 + 54378932 54378972 41 CCTTCTTTTTCCTCCCTCCCCTCCAACCGCGCCCCCCCTCC CCTTCTTTTTCCTCCCTCCCCTCCCACCGCGCCCCCCCTCC < 41bp 0.745439827333486 0.351472299161166 0.9634055 0.10148701 prediction 0.490879654666973 Functional Loss - HOXC-AS3 ENSG00000251151 ncRNA_intronic Human processed_transcript chr12:54378952 chr12:54378956 . . 0 25 hm5C_associated_SNPs_66938 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:54378956-54378957
64251 chr16 69350234 69350234 1 + C T UCEC 69350232 + 69350212 69350252 41 ATTTACGAAGCAAAGAGAAACACGGCAAGAAGCCAGTCAAA ATTTACGAAGCAAAGAGAAACATGGCAAGAAGCCAGTCAAA < 41bp 0.745435301825869 0.48529415766506 0.45473546 0.43955195 prediction 0.490870603651739 Functional Loss - VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69350232 chr16:69350234 synonymous SNV . 0 23 hm5C_associated_SNPs_66939 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:69350168-69350238
64251 chr17 16285294 16285294 1 + A T DLBC 16285290 + 16285270 16285310 41 GTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAGAT GTGGAGCCCAGTGACACCATCGAATATGTGAAGGCCAAGAT < 41bp 0.864432889775316 0.619010560826495 0.350178 0.25406116 prediction 0.490844657897642 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285290 chr17:16285294 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_66944 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:16285214-16285350
64251 chr11 75480093 75480093 1 + G T LUSC 75480090 + 75480070 75480110 41 CTGCGCGGCGAGCGTCAGGCCGAGGCTGACCGGAGCCAGCG CTGCGCGGCGAGCGTCAGGCCGATGCTGACCGGAGCCAGCG < 41bp 0.918630942644319 0.673208644696678 0.9219056 0.6022409 prediction 0.490844595895282 Functional Loss - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75480090 chr11:75480093 nonsynonymous SNV 0.094 1 24 hm5C_associated_SNPs_66945 0 0 2 DDX3X POSTAR2 ENCODE chr11:75480036-75480105
64251 chr2 228137730 228137730 1 + A T LUSC 228137726 + 228137706 228137746 41 TCCTGGCTCCCCTGGGTCCCCAGGACCTGCAGGACCAGCTG TCCTGGCTCCCCTGGGTCCCCAGGTCCTGCAGGACCAGCTG < 41bp 0.854139484030599 0.608724738675144 0.94092965 0.94414926 prediction 0.490829490710909 Functional Loss - COL4A3 ENSG00000169031 CDS Human protein_coding chr2:228137726 chr2:228137730 synonymous SNV . 0 25 hm5C_associated_SNPs_66946 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:228137692-228137730
64251 chr2 176959355 176959355 1 + C T SKCM 176959353 + 176959333 176959373 41 AAGGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCTATC AAGGACAAGCGGCGGCGTATCTTGGCTGCTACGAACCTATC < 41bp 0.793171855628695 0.547760521178696 0.81698287 0.092627466 prediction 0.490822668899997 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176959353 chr2:176959355 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_66947 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176959278-176959407
64251 chr3 101476681 101476681 1 + G T UCEC 101476679 + 101476659 101476699 41 TACTTTTATGCCAGTTGCATCAGGACTGTCTCCACTATCAC TACTTTTATGCCAGTTGCATCATGACTGTCTCCACTATCAC < 41bp 0.745397167354757 0.413926270977281 0.92521405 0.32985216 prediction 0.490794334709513 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101476679 chr3:101476681 stopgain 0.974 1 23 hm5C_associated_SNPs_66952 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:101476629-101476704
64251 chr16 1551745 1551745 1 + G T SARC 1551743 + 1551723 1551763 41 ATGGCGGCGTCCCCCAAGCACAGCTGGCGGGCTCTGACTCG ATGGCGGCGTCCCCCAAGCACATCTGGCGGGCTCTGACTCG < 41bp 0.745382979525167 0.398959080137381 0.13735655 0.120281994 prediction 0.490765959050333 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551743 chr16:1551745 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_66955 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr16:1551742-1551764
64251 chr22 25581054 25581054 1 + C T UCEC 25581052 + 25581032 25581072 41 AGCCTGGGGTGCTGGGCAGTCGCGTGCTGCCTTCCAGCATG AGCCTGGGGTGCTGGGCAGTCGTGTGCTGCCTTCCAGCATG < 41bp 0.796899128658362 0.551558903728865 0.30895376 0.29072565 prediction 0.490680449858995 Functional Loss - KIAA1671 ENSG00000197077 CDS Human protein_coding chr22:25581052 chr22:25581054 synonymous SNV . 0 23 hm5C_associated_SNPs_66968 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr22:25581053-25581074
64251 chr11 71821211 71821211 1 - C A LUSC 71821213 - 71821193 71821233 41 TGAGGATAGTGAAGAGGACTCAGAGGATGATGAGGATATGC TGAGGATAGTGAAGAGGACTCATAGGATGATGAGGATATGC < 41bp 0.745340088737445 0.401965547164544 0.703365 0.13921273 prediction 0.490680177474889 Functional Loss - ANAPC15 ENSG00000110200 CDS Human protein_coding chr11:71821213 chr11:71821211 stopgain 0.999 1 23 hm5C_associated_SNPs_66969 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr11:71821150-71821234
64251 chr22 41605899 41605899 1 + G A OV 41605896 + 41605876 41605916 41 CCCGCTGCATTTGCTCAGCCCTGGGACTCCTCGCTCCTTGG CCCGCTGCATTTGCTCAGCCCTGAGACTCCTCGCTCCTTGG < 41bp 0.745337493871388 0.492555330302378 0.7845321 0.2103082 prediction 0.490674987742776 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41605896 chr22:41605899 nonsynonymous SNV 0.433 1 24 hm5C_associated_SNPs_66971 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr22:41605886-41605931
64251 chr17 73126191 73126191 1 + A T rs151320396 73126187 + 73126167 73126207 41 CCCAGGAATGGCAGGTGCTACAAAAATGGTACCCACGTGGG CCCAGGAATGGCAGGTGCTACAAATATGGTACCCACGTGGG < 41bp 0.780810017151811 0.535478263435274 0.22883064 0.14125344 prediction 0.490663507433073 Functional Loss - ARMC7 ENSG00000125449 UTR3 Human protein_coding chr17:73126187 chr17:73126191 . . 0 25 hm5C_associated_SNPs_66973 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73126162-73126203
64251 chr11 65734948 65734948 1 + G T LUAD 65734946 + 65734926 65734966 41 GGCCTCCTTCCCTCAGACTGCGGGGACGGGGTCGCCGCCGA GGCCTCCTTCCCTCAGACTGCGTGGACGGGGTCGCCGCCGA < 41bp 0.898917557885276 0.653600464816104 0.90498817 0.48695478 prediction 0.490634186138343 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65734946 chr11:65734948 synonymous SNV . 0 23 hm5C_associated_SNPs_66976 0 0 9 DGCR8 POSTAR2 ENCODE chr11:65734944-65734953
64251 chr19 58846419 58846419 1 + C T HNSC 58846417 + 58846397 58846437 41 TGGCTGCAGCCCGAGGCGCACTCCAAGGAGCAGATACTGGA TGGCTGCAGCCCGAGGCGCACTTCAAGGAGCAGATACTGGA < 41bp 0.745314687906457 0.464684868564994 0.9350991 0.2656753 prediction 0.490629375812915 Functional Loss - ZSCAN22 ENSG00000182318 CDS Human protein_coding chr19:58846417 chr19:58846419 nonsynonymous SNV 0.572 2 23 hm5C_associated_SNPs_66977 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:58846402-58846423
64251 chr17 18218741 18218741 1 + G T rs575638776 18218738 + 18218718 18218758 41 CCTGCGGCGTCCCGTAGCCTCGCGTTAAGCCTTGTTCAGAG CCTGCGGCGTCCCGTAGCCTCGCTTTAAGCCTTGTTCAGAG < 41bp 0.745303761755168 0.397175239547702 0.25511295 0.04188347 prediction 0.490607523510337 Functional Loss - SMCR8 ENSG00000176994 UTR5 Human protein_coding chr17:18218738 chr17:18218741 . . 0 24 hm5C_associated_SNPs_66982 0 0 2 DDX3X POSTAR2 ENCODE chr17:18218669-18218806
64251 chr10 70863698 70863698 1 + C T rs146830092 70863696 + 70863676 70863716 41 TACTCTGGATCAGGCTTCGGCTCCGGCTCCGGCTCTGGATC TACTCTGGATCAGGCTTCGGCTTCGGCTCCGGCTCTGGATC < 41bp 0.801076324610715 0.555773776466923 0.20106578 0.14610064 prediction 0.490605096287584 Functional Loss - SRGN ENSG00000122862 CDS Human protein_coding chr10:70863696 chr10:70863698 nonsynonymous SNV 0.962 0 23 hm5C_associated_SNPs_66983 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:70863680-70863720
64251 chr3 141497196 141497196 1 + G T LUAD 141497194 + 141497174 141497214 41 CCTGCAGGCCCGGAAGCCCTCGGACTGCGACAGCAAAGAGC CCTGCAGGCCCGGAAGCCCTCGTACTGCGACAGCAAAGAGC < 41bp 0.745301472224148 0.383887631055299 0.7881777 0.29638517 prediction 0.490602944448295 Functional Loss - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497194 chr3:141497196 nonsynonymous SNV 0.053 2 23 hm5C_associated_SNPs_66984 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141497156-141497199
64251 chr16 4432189 4432189 1 + G A CESC 4432186 + 4432166 4432206 41 TGCTTGTGCCCCGAAGGCTTCACGGGCCTGTACTGTGAGAG TGCTTGTGCCCCGAAGGCTTCACAGGCCTGTACTGTGAGAG < 41bp 0.751139796104648 0.505842836350581 0.4231254 0.18918768 prediction 0.490593919508133 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4432186 chr16:4432189 synonymous SNV . 0 24 hm5C_associated_SNPs_66986 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4432165-4432199
64251 chr16 89805603 89805603 1 + C T STAD 89805601 + 89805581 89805621 41 ACTGTGCTTGTATCCCCAGCCACGAAGAGCTGGACCAGCTT ACTGTGCTTGTATCCCCAGCCATGAAGAGCTGGACCAGCTT < 41bp 0.778787004031591 0.533505238359605 0.32084626 0.2708612 prediction 0.490563531343972 Functional Loss - FANCA ENSG00000187741 CDS Human protein_coding chr16:89805601 chr16:89805603 nonsynonymous SNV 0.111 3 23 hm5C_associated_SNPs_66990 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89805582-89805604
64251 chr1 151263006 151263006 1 + G A UCEC 151263003 + 151262983 151263023 41 GCAGCTTGGGGCCCAGTCCCCTGGCCGGGGGACCACCTTGG GCAGCTTGGGGCCCAGTCCCCTGACCGGGGGACCACCTTGG < 41bp 0.754811266682676 0.509538379362186 0.7600516 0.34274656 prediction 0.490545774640981 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263003 chr1:151263006 stopgain 0.616 0 24 hm5C_associated_SNPs_66992 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:151263006-151263035
64251 chr19 18499205 18499205 1 + G T OV 18499202 + 18499182 18499222 41 CGGGCTCTGTTCCGGCTGTCCCCGACGGCGTCAAGGTCGTG CGGGCTCTGTTCCGGCTGTCCCCTACGGCGTCAAGGTCGTG < 41bp 0.745254784315424 0.359855627151194 0.08656907 0.0123205185 prediction 0.490509568630848 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499202 chr19:18499205 synonymous SNV . 0 24 hm5C_associated_SNPs_66997 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:18499190-18499227
64251 chr8 97345967 97345967 1 + C T COAD 97345965 + 97345945 97345985 41 TTGTTTCCCACAGACCTGGCCGCGTCAGGCAGATCATCGCC TTGTTTCCCACAGACCTGGCCGTGTCAGGCAGATCATCGCC < 41bp 0.761190677286789 0.515946891157539 0.35632175 0.20775908 prediction 0.490487572258501 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97345965 chr8:97345967 synonymous SNV . 0 23 hm5C_associated_SNPs_66999 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:97345926-97345974
64251 chr2 109380318 109380318 1 + G T LIHC 109380315 + 109380295 109380335 41 TTTTGGAAGCAAAAATGTGTCTGGAATTTCATTTACAGAAA TTTTGGAAGCAAAAATGTGTCTGTAATTTCATTTACAGAAA < 41bp 0.745229473894408 0.396944113162652 0.013693392 0.006590128 prediction 0.490458947788816 Functional Loss - RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109380315 chr2:109380318 nonsynonymous SNV 0.884 1 24 hm5C_associated_SNPs_67001 0 0 10 CSTF2 POSTAR2 GSE37401,GSM917676 chr2:109380300-109380320
64251 chr13 34405483 34405483 1 + T C COAD 34405482 + 34405462 34405502 41 TGCTATTGTCAGTCAGCAAACTCCACAAAGGTACCAGTATA TGCTATTGTCAGTCAGCAAACCCCACAAAGGTACCAGTATA < 41bp 0.745218852756164 0.478660490428601 0.88940454 0.0644958 prediction 0.490437705512328 Functional Loss - RFC3 ENSG00000133119 CDS Human protein_coding chr13:34405482 chr13:34405483 synonymous SNV . 0 22 hm5C_associated_SNPs_67003 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:34405380-34405498
64251 chr22 17528285 17528285 1 + G T LUAD 17528283 + 17528263 17528303 41 AGGACCAGCTGACTAAGGAGCTGCAGCAGCATGTAAAGTCA AGGACCAGCTGACTAAGGAGCTTCAGCAGCATGTAAAGTCA < 41bp 0.745217236127907 0.411000479240044 0.16994414 0.117346615 prediction 0.490434472255814 Functional Loss - CECR7 ENSG00000237438 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17528283 chr22:17528285 . . 0 23 hm5C_associated_SNPs_67005 0 0 4 UCHL5 POSTAR2 ENCODE chr22:17528211-17528335
64251 chrX 1531703 1531703 1 + G T UCEC 1531701 + 1531681 1531721 41 CAGTCATGCAGGATCCGGCACAGGACGTACAGCTCAGCGCT CAGTCATGCAGGATCCGGCACATGACGTACAGCTCAGCGCT < 41bp 0.745214806157458 0.384866914519514 0.71473825 0.37449837 prediction 0.490429612314916 Functional Loss - ASMTL ENSG00000169093 CDS Human protein_coding chrX:1531701 chrX:1531703 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_67008 0 0 2 GRWD1 POSTAR2 ENCODE chrX:1531692-1531705
64251 chr19 10663997 10663997 1 - C G rs77956256 10663998 - 10663978 10664018 41 GTCCAGTGCAAACTACAGTACGTGAGTCAGGCCCTGAGGGG GTCCAGTGCAAACTACAGTACCTGAGTCAGGCCCTGAGGGG < 41bp 0.815899920463103 0.570690380047292 0.684893 0.44341418 prediction 0.490419080831621 Functional Loss - ATG4D;KRI1 ENSG00000129347;ENSG00000130734 UTR3 Human other chr19:10663998 chr19:10663997 . . 0 22 hm5C_associated_SNPs_67012 0 0 1 LSM11 POSTAR2 ENCODE chr19:10663948-10664011
64251 chr17 43226847 43226847 1 + C T LUAD 43226845 + 43226825 43226865 41 AAGGGCCAGAATGGGGACGACTCGTCCGCTGGCGGCGACTT AAGGGCCAGAATGGGGACGACTTGTCCGCTGGCGGCGACTT < 41bp 0.754927000306229 0.509717546969671 0.115039796 0.09683126 prediction 0.490418906673117 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226845 chr17:43226847 nonsynonymous SNV 0.197 0 23 hm5C_associated_SNPs_67013 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:43226835-43226861
64251 chrX 23701803 23701803 1 + G T LIHC 23701801 + 23701781 23701821 41 CTTTTAGTCTGCCCTGCTGGCTGGAAACCTGGTAGTGAAAC CTTTTAGTCTGCCCTGCTGGCTTGAAACCTGGTAGTGAAAC < 41bp 0.745209072803408 0.415555397812438 0.29727554 0.10871339 prediction 0.490418145606816 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23701801 chrX:23701803 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_67014 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:23701785-23701814
64251 chr2 134884697 134884697 1 + G C rs10175383 134884696 + 134884676 134884716 41 GCACCTAGTTAGAGGCCCCACGTGGTGAGGATATGGCAGGG GCACCTAGTTAGAGGCCCCACCTGGTGAGGATATGGCAGGG < 41bp 0.809637853910346 0.564441202698867 0.29856116 0.071638525 prediction 0.490393302422957 Functional Loss - MIR3679 ENSG00000263813 ncRNA_exonic Human miRNA chr2:134884696 chr2:134884697 . . 0 22 hm5C_associated_SNPs_67019 0 0 2 SUGP2 POSTAR2 ENCODE chr2:134884663-134884722
64251 chr6 25983486 25983486 1 + G T UCEC 25983484 + 25983464 25983504 41 GTGGATACACCCAGGAGAATCAGGACACATCTTCCAGGAGA GTGGATACACCCAGGAGAATCATGACACATCTTCCAGGAGA < 41bp 0.876744139639309 0.631549604191086 0.9184128 0.3825232 prediction 0.490389070896447 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983484 chr6:25983486 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_67020 0 0 1 GRWD1 POSTAR2 ENCODE chr6:25983416-25983521
64251 chr11 44636870 44636870 1 + A T STAD 44636866 + 44636846 44636886 41 GTGACTGAGCTCATTCGAGACTACAACAGCAGTCGCGAGGA GTGACTGAGCTCATTCGAGACTACTACAGCAGTCGCGAGGA < 41bp 0.745191093940591 0.400539199192351 0.8880024 0.23923424 prediction 0.490382187881182 Functional Loss - CD82 ENSG00000085117 CDS Human protein_coding chr11:44636866 chr11:44636870 nonsynonymous SNV 0.022 1 25 hm5C_associated_SNPs_67021 0 0 1 SND1 POSTAR2 ENCODE chr11:44636869-44636924
64251 chr5 179036423 179036423 1 + G T COAD 179036421 + 179036401 179036441 41 ATCTTCTGCAACACCTGCTCCAGCAACGAGCTGGCCCTGCC ATCTTCTGCAACACCTGCTCCATCAACGAGCTGGCCCTGCC < 41bp 0.745177619430943 0.413740010906728 0.35615912 0.065692335 prediction 0.490355238861887 Functional Loss - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179036421 chr5:179036423 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_67027 0 0 4 BUD13 POSTAR2 ENCODE chr5:179036336-179036425
64251 chr3 44816791 44816791 1 + T C KIRC 44816790 + 44816770 44816810 41 TTTTGTGCGAATTCGTCCTCCTGCAGAAAGATCTGGGTCAG TTTTGTGCGAATTCGTCCTCCCGCAGAAAGATCTGGGTCAG < 41bp 0.776469660218182 0.531296873883907 0.08932832 0.06302917 prediction 0.490345572668551 Functional Loss - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44816790 chr3:44816791 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_67028 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:44816764-44816795
64251 chr2 120194773 120194773 1 + G T LUSC 120194770 + 120194750 120194790 41 ATTTTTGGCCTGGAGTTCCTCATGGTGTCCCAGTTGTGCGA ATTTTTGGCCTGGAGTTCCTCATTGTGTCCCAGTTGTGCGA < 41bp 0.745168829710187 0.354071479429542 0.38621938 0.023994565 prediction 0.490337659420374 Functional Loss - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194770 chr2:120194773 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_67031 0 0 3 DDX3X POSTAR2 ENCODE chr2:120194760-120194785
64251 chr19 11094864 11094864 1 + C T BLCA 11094862 + 11094842 11094882 41 CCCACCCCTGGGCGGAACTCCTCGGCCAGGTCCTTCCCCGG CCCACCCCTGGGCGGAACTCCTTGGCCAGGTCCTTCCCCGG < 41bp 0.772131215763281 0.526969970922759 0.88524437 0.4778285 prediction 0.490322489681043 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11094862 chr19:11094864 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_67034 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:11094856-11094894
64251 chr19 50303321 50303321 1 + G C SARC 50303320 + 50303300 50303340 41 ATCCGCATTGCGGGCGACTACGTGAGTGAGGAGGTGTGGTA ATCCGCATTGCGGGCGACTACCTGAGTGAGGAGGTGTGGTA < 41bp 0.861016503939834 0.615856514273067 0.72057736 0.54996455 prediction 0.490319979333535 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50303320 chr19:50303321 nonsynonymous SNV 0.901 4 22 hm5C_associated_SNPs_67035 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50303299-50303321
64251 chr6 44387305 44387305 1 + T C rs11571982 44387304 + 44387284 44387324 41 ACAGCGACAAGTTGTACAGACTCCAAACACAGTTCTCTCTA ACAGCGACAAGTTGTACAGACCCCAAACACAGTTCTCTCTA < 41bp 0.786733808534211 0.541600598545593 0.97591877 0.26596838 prediction 0.490266419977236 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44387304 chr6:44387305 synonymous SNV . 0 22 hm5C_associated_SNPs_67040 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:44387302-44387333
64251 chr17 7605013 7605013 1 + G A SKCM 7605010 + 7604990 7605030 41 GCCCATTCGCTCTGCTTCTCCCCGGATGGCTCCCAGCTCTT GCCCATTCGCTCTGCTTCTCCCCAGATGGCTCCCAGCTCTT < 41bp 0.749497319023297 0.50437639973328 0.40597692 0.17601094 prediction 0.490241838580032 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7605010 chr17:7605013 synonymous SNV . 0 24 hm5C_associated_SNPs_67043 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:7604998-7605052
64251 chr22 45939306 45939306 1 + C T rs375160844 45939304 + 45939284 45939324 41 TCAACGAGTGCCAGCGCTACCCCGGGCGCCTGTGTGGCCAC TCAACGAGTGCCAGCGCTACCCTGGGCGCCTGTGTGGCCAC < 41bp 0.806737813225631 0.561623770432747 0.39780164 0.21857122 prediction 0.490228085585769 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45939304 chr22:45939306 synonymous SNV . 0 23 hm5C_associated_SNPs_67044 0 0 3 LIN28B POSTAR2 ENCODE chr22:45939278-45939330
64251 chr19 7591763 7591763 1 + C T UCEC 7591761 + 7591741 7591781 41 AGCGGTACTACCACCGAGGCCACGTGGACCCGGCCAACGAC AGCGGTACTACCACCGAGGCCATGTGGACCCGGCCAACGAC < 41bp 0.745113034476517 0.481580960761432 0.21781713 0.17108393 prediction 0.490226068953035 Functional Loss - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7591761 chr19:7591763 synonymous SNV . 0 23 hm5C_associated_SNPs_67045 0 0 1 SND1 POSTAR2 ENCODE chr19:7591666-7591791
64251 chr19 37966852 37966852 1 + C T BLCA 37966850 + 37966830 37966870 41 ATGGGATTGTCTGGATTCTTCTCAAAGACATCTGTACAGTA ATGGGATTGTCTGGATTCTTCTTAAAGACATCTGTACAGTA < 41bp 0.745103770834947 0.453576304370508 0.19324955 0.10514951 prediction 0.490207541669894 Functional Loss - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37966850 chr19:37966852 stopgain 0.015 0 23 hm5C_associated_SNPs_67046 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37966827-37966878
64251 chr19 4224483 4224483 1 + T C LIHC 4224482 + 4224462 4224502 41 AGATTCTGCAGATGCAGAGACTCCAGGCTCAGGGCCGCTGA AGATTCTGCAGATGCAGAGACCCCAGGCTCAGGGCCGCTGA < 41bp 0.785934637673976 0.540834100706365 0.91465724 0.16008067 prediction 0.490201073935222 Functional Loss - ANKRD24 ENSG00000089847 CDS Human protein_coding chr19:4224482 chr19:4224483 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_67047 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:4224472-4224501
64251 chr6 10902994 10902994 1 + A T STAD 10902990 + 10902970 10903010 41 CTGTAAATCATTTGCTTCAACAGGAGGTGAGTTGCAAGTAA CTGTAAATCATTTGCTTCAACAGGTGGTGAGTTGCAAGTAA < 41bp 0.850397850054527 0.605299802799292 0.83336186 0.8435934 prediction 0.490196094510471 Functional Loss - SYCP2L ENSG00000153157 CDS Human protein_coding chr6:10902990 chr6:10902994 nonsynonymous SNV 0.590 4 25 hm5C_associated_SNPs_67048 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:10902988-10903020
64251 chr3 122399911 122399911 1 + G T UCEC 122399909 + 122399889 122399929 41 CTTCCTGGTGTTCTTCTACCCGGAGGACGGTGAGGGGCGCG CTTCCTGGTGTTCTTCTACCCGTAGGACGGTGAGGGGCGCG < 41bp 0.882272638508842 0.637175605933874 0.84730303 0.3175826 prediction 0.490194065149937 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399909 chr3:122399911 stopgain 0.788 0 23 hm5C_associated_SNPs_67049 0 0 2 DROSHA POSTAR2 ENCODE chr3:122399901-122399947
64251 chr1 227174193 227174193 1 + G T BLCA 227174190 + 227174170 227174210 41 ACTTGGATGCCATCCTCATCCTGGGGGAGGCCTTCGCCTCT ACTTGGATGCCATCCTCATCCTGTGGGAGGCCTTCGCCTCT < 41bp 0.914294569379657 0.669207453079823 0.7784615 0.19701615 prediction 0.490174232599668 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227174190 chr1:227174193 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_67050 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:227174177-227174215
64251 chr19 3381814 3381814 1 + C T UCEC 3381812 + 3381792 3381832 41 AGCGCAAGTACTTCAAGAAGCACGAGAAGCGGATGTCGAAG AGCGCAAGTACTTCAAGAAGCATGAGAAGCGGATGTCGAAG < 41bp 0.745084831316325 0.490008095852697 0.300439 0.25701812 prediction 0.490169662632651 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381812 chr19:3381814 synonymous SNV . 0 23 hm5C_associated_SNPs_67051 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:3381800-3381820
64251 chr1 38265357 38265357 1 + C T UCEC 38265355 + 38265335 38265375 41 GGCCTGGGCCCACCTCCTGACACCAAACGGGCCCCATTCGA GGCCTGGGCCCACCTCCTGACATCAAACGGGCCCCATTCGA < 41bp 0.745079257073267 0.468926933941356 0.049122572 0.058733642 prediction 0.490158514146533 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265355 chr1:38265357 nonsynonymous SNV 0.805 1 23 hm5C_associated_SNPs_67053 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:38265353-38265374
64251 chr10 102738692 102738692 1 + G C BLCA 102738688 + 102738668 102738708 41 GACAAGGTGTACTACTTCTTCACGGAGCGTGCCACTGAGGA GACAAGGTGTACTACTTCTTCACGCAGCGTGCCACTGAGGA < 41bp 0.745077246732068 0.450152688257152 0.22150815 0.18837115 prediction 0.490154493464135 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738688 chr10:102738692 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_67054 0 0 3 PPIG POSTAR2 ENCODE chr10:102738686-102738732
64251 chr1 71532472 71532472 1 - G A UCEC 71532474 - 71532454 71532494 41 CAAAAAAAGACGAACAAGATCACGGTCACCCGAAAGGTTTG CAAAAAAAGACGAACAAGATCATGGTCACCCGAAAGGTTTG < 41bp 0.77925412831383 0.534188324641247 0.36975107 0.37523222 prediction 0.490131607345166 Functional Loss - ZRANB2 ENSG00000132485 CDS Human protein_coding chr1:71532474 chr1:71532472 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_67058 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:71532417-71532480
64251 chr19 58846556 58846556 1 + G A rs149157552 58846553 + 58846533 58846573 41 TGCTGGTGGAGGATCTGACTCAGGTGCTGGACAAGAGAGGT TGCTGGTGGAGGATCTGACTCAGATGCTGGACAAGAGAGGT < 41bp 0.752883072914502 0.507823012187348 0.8607603 0.7217424 prediction 0.490120121454309 Functional Loss - ZSCAN22;ZSCAN22 ENSG00000182318 CDS Human protein_coding chr19:58846553 chr19:58846556 nonsynonymous SNV 0.051 0 24 hm5C_associated_SNPs_67061 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58846532-58846563
64251 chr19 7509252 7509252 1 + G A COAD 7509249 + 7509229 7509269 41 GACGCACAGCCACTTCCTCGCTCGGCTCAAGGAGCGCCGCC GACGCACAGCCACTTCCTCGCTCAGCTCAAGGAGCGCCGCC < 41bp 0.752308729240563 0.507257709889872 0.3209756 0.2334733 prediction 0.490102038701382 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7509249 chr19:7509252 nonsynonymous SNV 0.166 0 24 hm5C_associated_SNPs_67064 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:7509223-7509262
64251 chrX 105865928 105865928 1 + A C GBM 105865927 + 105865907 105865947 41 CTTGAAATGACCTGGACTAACAGAAGAAATTTTCCTGCATT CTTGAAATGACCTGGACTAACCGAAGAAATTTTCCTGCATT < 41bp 0.763248263908217 0.518211167041132 0.77041847 0.32979473 prediction 0.490074193734169 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105865927 chrX:105865928 synonymous SNV . 0 22 hm5C_associated_SNPs_67070 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:105865920-105865940
64251 chr2 130948089 130948089 1 + G T LUAD 130948087 + 130948067 130948107 41 CGGGGGAGCATTGGCCCTGGCGGAACGCAGCAGCCGCGAAG CGGGGGAGCATTGGCCCTGGCGTAACGCAGCAGCCGCGAAG < 41bp 0.886485436025409 0.641468111645041 0.86044157 0.4004338 prediction 0.490034648760736 Functional Loss - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130948087 chr2:130948089 stopgain 0.008 0 23 hm5C_associated_SNPs_67078 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:130948045-130948104
64251 chr3 152880516 152880516 1 + G T COAD 152880514 + 152880494 152880534 41 CAAAGTGGTGGTGCTGGGCTCGGGCGGCGTGGGCAAGTCCG CAAAGTGGTGGTGCTGGGCTCGTGCGGCGTGGGCAAGTCCG < 41bp 0.882610305862495 0.637596551579045 0.90859044 0.33134693 prediction 0.4900275085669 Functional Loss - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880514 chr3:152880516 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_67080 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:152880491-152880522
64251 chr16 3076282 3076282 1 + C T SKCM 3076280 + 3076260 3076300 41 GGAGCTGTGGCGTCGTCAGCCTCCATACAGGTGAGCAGGGC GGAGCTGTGGCGTCGTCAGCCTTCATACAGGTGAGCAGGGC < 41bp 0.836259323819124 0.591248441070454 0.9598062 0.6880388 prediction 0.49002176549734 Functional Loss - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3076280 chr16:3076282 nonsynonymous SNV 0.926 2 23 hm5C_associated_SNPs_67081 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:3076263-3076289
64251 chr2 162279943 162279943 1 + G T UCEC 162279941 + 162279921 162279961 41 CCAACGACTCGCCGCGCTCGCAGATCGTGCCCGGGGCCCGC CCAACGACTCGCCGCGCTCGCATATCGTGCCCGGGGCCCGC < 41bp 0.745009812446834 0.385883791733885 0.3465142 0.0738233 prediction 0.490019624893668 Functional Loss - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162279941 chr2:162279943 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_67082 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:162279925-162279968
64251 chr6 33371529 33371529 1 + G T CESC 33371527 + 33371507 33371547 41 ATCAGGTGTTCCTCCCATGGCAGGAGGGAAGAAACCCAGCA ATCAGGTGTTCCTCCCATGGCATGAGGGAAGAAACCCAGCA < 41bp 0.745001665548234 0.407752967209743 0.632128 0.45255283 prediction 0.490003331096468 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33371527 chr6:33371529 stopgain 0.112 0 23 hm5C_associated_SNPs_67086 0 0 8 BUD13 POSTAR2 ENCODE chr6:33371495-33371561
64251 chr15 40861942 40861942 1 + G C CESC 40861941 + 40861921 40861961 41 GCAGAAACCAGTTATTACTTCGAGGGCGGCCTGCGTAAGGT GCAGAAACCAGTTATTACTTCCAGGGCGGCCTGCGTAAGGT < 41bp 0.744997726801624 0.427552843854486 0.9107913 0.638975 prediction 0.489995453603248 Functional Loss - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40861941 chr15:40861942 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_67087 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:40861924-40861953
64251 chr1 1246415 1246415 1 + G A UCEC 1246412 + 1246392 1246432 41 AGACACGTGTAGCCCCAGCCCACGGCTTATTCCTCAAGTCA AGACACGTGTAGCCCCAGCCCACAGCTTATTCCTCAAGTCA < 41bp 0.754928464032057 0.509933550223498 0.1459074 0.11029929 prediction 0.489989827617118 Functional Loss - PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246412 chr1:1246415 nonsynonymous SNV 0.177 3 24 hm5C_associated_SNPs_67088 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:1246400-1246429
64251 chr6 74171593 74171593 1 + G T UCEC 74171590 + 74171570 74171610 41 CTCCCAGCATGTTCTACTTCCGAGGCTGTGGCCGTTGGGTC CTCCCAGCATGTTCTACTTCCGATGCTGTGGCCGTTGGGTC < 41bp 0.744988616816778 0.355175738516608 0.84571606 0.32712573 prediction 0.489977233633556 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74171590 chr6:74171593 nonsynonymous SNV 0.016 2 24 hm5C_associated_SNPs_67090 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:74171580-74171600
64251 chr2 96934294 96934294 1 + G C SKCM 96934290 + 96934270 96934310 41 ACCCTTGAGGGCCATGAATCCACTGTGTGGAGCTTGGCCTT ACCCTTGAGGGCCATGAATCCACTCTGTGGAGCTTGGCCTT < 41bp 0.744978666886858 0.468359053441351 0.4119237 0.21952307 prediction 0.489957333773717 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96934290 chr2:96934294 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_67093 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:96934247-96934313
64251 chr19 56203203 56203203 1 + G T LUAD 56203200 + 56203180 56203220 41 CCCTGGGGGGGCCCAGCACCCATGGCTGCTGCCGTCCCCAC CCCTGGGGGGGCCCAGCACCCATTGCTGCTGCCGTCCCCAC < 41bp 0.919720273860468 0.674742897121589 0.7289562 0.24209014 prediction 0.489954753477758 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56203200 chr19:56203203 nonsynonymous SNV 0.032 0 24 hm5C_associated_SNPs_67094 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:56203203-56203243
64251 chr4 39465225 39465225 1 + G T ESCA 39465222 + 39465202 39465242 41 GCCACCGCCACAGCCACGATCATGGTAGGGCCAGCCTCAAC GCCACCGCCACAGCCACGATCATTGTAGGGCCAGCCTCAAC < 41bp 0.744976940520902 0.345775233296399 0.90867317 0.123036385 prediction 0.489953881041803 Functional Loss - LIAS ENSG00000121897 CDS Human protein_coding chr4:39465222 chr4:39465225 nonsynonymous SNV 0.958 4 24 hm5C_associated_SNPs_67095 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:39465212-39465262
64251 chr17 7476746 7476746 1 + C T rs573926042 7476744 + 7476724 7476764 41 GCCTAACCCCGAGGAGCGGCCGCGTGAGGCACCAGGAGCCC GCCTAACCCCGAGGAGCGGCCGTGTGAGGCACCAGGAGCCC < 41bp 0.750140562153983 0.505167271524097 0.47811374 0.42025387 prediction 0.489946581259772 Functional Loss - SENP3-EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7476744 chr17:7476746 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_67096 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:7476691-7476746
64251 chr16 88925152 88925152 1 + G T UCEC 88925150 + 88925130 88925170 41 TGGGGAAGGCCCTGGTCGACCAGAGGGAGCTGTACCTGGGC TGGGGAAGGCCCTGGTCGACCATAGGGAGCTGTACCTGGGC < 41bp 0.892434128751017 0.647463707125787 0.9205289 0.8947253 prediction 0.48994084325046 Functional Loss - TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88925150 chr16:88925152 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_67097 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr16:88925128-88925152
64251 chr15 40750914 40750914 1 + G A rs368576045 40750911 + 40750891 40750931 41 CCTGGAGAATGTGGCCGGTCCCCGGAGTGCAGATGAGGCTG CCTGGAGAATGTGGCCGGTCCCCAGAGTGCAGATGAGGCTG < 41bp 0.756960036204876 0.511989974827228 0.5573554 0.10367036 prediction 0.489940122755296 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40750911 chr15:40750914 nonsynonymous SNV 0.966 0 24 hm5C_associated_SNPs_67098 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr15:40750909-40750945
64251 chr13 88330013 88330013 1 + C T rs534670956 88330011 + 88329991 88330031 41 AGGTCACCTACAGCAGCAACCACCACCTGCAGCAGCAGCAG AGGTCACCTACAGCAGCAACCATCACCTGCAGCAGCAGCAG < 41bp 0.744964281985904 0.483591549953267 0.18932092 0.117833436 prediction 0.489928563971809 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88330011 chr13:88330013 synonymous SNV . 0 23 hm5C_associated_SNPs_67101 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:88330000-88330020
64251 chr19 10395208 10395208 1 + C T rs1801714 10395206 + 10395186 10395226 41 GTTCCAGCCCAGCCACTGGGCCCGAGGGCCCAGCTCCTGCT GTTCCAGCCCAGCCACTGGGCCTGAGGGCCCAGCTCCTGCT < 41bp 0.744962104954494 0.480250344725742 0.2318489 0.19548753 prediction 0.489924209908988 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395206 chr19:10395208 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_67102 0 0 5 RPS3 POSTAR2 ENCODE chr19:10395185-10395236
64251 chr11 68700826 68700826 1 + C T UCEC 68700824 + 68700804 68700844 41 CGCCTGGCTGAGGAGTACGGCGCGAGGGTGGTGCGGACACT CGCCTGGCTGAGGAGTACGGCGTGAGGGTGGTGCGGACACT < 41bp 0.811204005309295 0.566255606064776 0.59222895 0.45015827 prediction 0.489896798489039 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68700824 chr11:68700826 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_67106 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:68700797-68700829
64251 chrX 152018931 152018931 1 + G T LUAD 152018929 + 152018909 152018949 41 AGCAAGGGTTTGATAATCCCCAGGTGCGGTTCTTTCTGGGT AGCAAGGGTTTGATAATCCCCATGTGCGGTTCTTTCTGGGT < 41bp 0.744938764750445 0.39093171591222 0.85398924 0.2734632 prediction 0.489877529500889 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152018929 chrX:152018931 nonsynonymous SNV 0.959 2 23 hm5C_associated_SNPs_67108 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:152018920-152018957
64251 chr13 28009312 28009312 1 + A T UCS 28009308 + 28009288 28009328 41 GCTGTTGTACATGATCCTGACAAGAAGAAAATGAAGCTCAA GCTGTTGTACATGATCCTGACAAGTAGAAAATGAAGCTCAA < 41bp 0.744924151437239 0.426864417006938 0.47281352 0.37747115 prediction 0.489848302874478 Functional Loss - GTF3A ENSG00000122034 CDS Human protein_coding chr13:28009308 chr13:28009312 stopgain 0.998 1 25 hm5C_associated_SNPs_67114 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28009271-28009329
64251 chr6 107349503 107349503 1 + G C rs562070319 107349499 + 107349479 107349519 41 AGTGCGCCTCTGCTGGCGCGCCGCGCCGGGCCCCCTGCCCG AGTGCGCCTCTGCTGGCGCGCCGCCCCGGGCCCCCTGCCCG < 41bp 0.830912267973528 0.586008816159898 0.22072512 0.16696286 prediction 0.489806903627261 Functional Loss - C6orf203 ENSG00000130349 UTR5 Human protein_coding chr6:107349499 chr6:107349503 . . 0 25 hm5C_associated_SNPs_67119 0 0 2 PRPF8 POSTAR2 ENCODE chr6:107349433-107349514
64251 chr12 113722420 113722420 1 + C T UCEC 113722418 + 113722398 113722438 41 CAGTCAACGGGGTCTGGATCCTCGTGGAGACATTTATGCTG CAGTCAACGGGGTCTGGATCCTTGTGGAGACATTTATGCTG < 41bp 0.744895098374105 0.461036582523534 0.7071871 0.39226452 prediction 0.489790196748211 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113722418 chr12:113722420 synonymous SNV . 0 23 hm5C_associated_SNPs_67121 0 0 7 BUD13 POSTAR2 ENCODE chr12:113722352-113722436
64251 chr14 45583431 45583431 1 + G T UCEC 45583429 + 45583409 45583449 41 ATCAAACACTCCTGAAAGAACAGGATTCTTTAAAAAGGAAA ATCAAACACTCCTGAAAGAACATGATTCTTTAAAAAGGAAA < 41bp 0.744882890146314 0.425558379034629 0.21168801 0.084536016 prediction 0.489765780292628 Functional Loss - PRPF39 ENSG00000185246 CDS Human protein_coding chr14:45583429 chr14:45583431 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_67125 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:45583403-45583439
64251 chr9 133750337 133750337 1 + G T SARC 133750335 + 133750315 133750355 41 TGGCCTGAGCAGGTTGATGACAGGGGACACCTACACAGCCC TGGCCTGAGCAGGTTGATGACATGGGACACCTACACAGCCC < 41bp 0.897466680974301 0.652590311916737 0.9260663 0.18120858 prediction 0.489752738115128 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133750335 chr9:133750337 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_67128 0 0 6 BUD13 POSTAR2 ENCODE chr9:133750306-133750356
64251 chr1 100356892 100356892 1 + C T UCEC 100356890 + 100356870 100356910 41 TGTCAGTAACCGGCTTATTTCACGATCAGGAACTATTGCTG TGTCAGTAACCGGCTTATTTCATGATCAGGAACTATTGCTG < 41bp 0.823889874981722 0.57901351866426 0.3090075 0.22149885 prediction 0.489752712634924 Functional Loss - AGL ENSG00000162688 CDS Human protein_coding chr1:100356890 chr1:100356892 stopgain 0.986 1 23 hm5C_associated_SNPs_67129 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:100356876-100356898
64251 chr3 97499503 97499503 1 + G T COAD 97499501 + 97499481 97499521 41 ATGTCAGGTCAAGGAAGATACAGAAATCTCTGGGAACACTA ATGTCAGGTCAAGGAAGATACATAAATCTCTGGGAACACTA < 41bp 0.744872159197552 0.422129683136934 0.095315844 0.024211854 prediction 0.489744318395104 Functional Loss - ARL6 ENSG00000113966 CDS Human protein_coding chr3:97499501 chr3:97499503 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_67130 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:97499468-97499503
64251 chr19 7524857 7524857 1 + C T UCEC 7524855 + 7524835 7524875 41 AGGAAGGTGGTCGAGGCCCGCGCCACGAGACTCCGGGACTT AGGAAGGTGGTCGAGGCCCGCGTCACGAGACTCCGGGACTT < 41bp 0.811063942553161 0.566211449442702 0.5593548 0.43389297 prediction 0.489704986220918 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7524855 chr19:7524857 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_67136 0 0 1 BUD13 POSTAR2 ENCODE chr19:7524794-7524873
64251 chr19 8438707 8438707 1 + C T UCEC 8438705 + 8438685 8438725 41 TCTGGAAGACCTGGCGGGGCCGCTACTACCCGCTGCAGGCC TCTGGAAGACCTGGCGGGGCCGTTACTACCCGCTGCAGGCC < 41bp 0.780944512888646 0.536093257673922 0.13009787 0.04708582 prediction 0.489702510429447 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8438705 chr19:8438707 synonymous SNV . 0 23 hm5C_associated_SNPs_67137 0 0 2 SND1 POSTAR2 ENCODE chr19:8438676-8438746
64251 chr1 155279692 155279692 1 + G T BLCA 155279689 + 155279669 155279709 41 TACGGCGGCCCTCCCTGGTGCACGGGTACCCAGTCCTGGCC TACGGCGGCCCTCCCTGGTGCACTGGTACCCAGTCCTGGCC < 41bp 0.920377707991156 0.675526798143244 0.85755885 0.32568967 prediction 0.489701819695824 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155279689 chr1:155279692 nonsynonymous SNV 0.615 0 24 hm5C_associated_SNPs_67138 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155279692-155279693
64251 chr6 26597330 26597330 1 + G T COAD 26597327 + 26597307 26597347 41 GAAGAAGCGGCCTGTGGCAGCAAGAAACGGGTAGTGCCAGG GAAGAAGCGGCCTGTGGCAGCAATAAACGGGTAGTGCCAGG < 41bp 0.91628249949322 0.671444705514284 0.46763557 0.21557477 prediction 0.489675587957873 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597327 chr6:26597330 nonsynonymous SNV 0.412 0 24 hm5C_associated_SNPs_67141 0 0 4 GRWD1 POSTAR2 ENCODE chr6:26597265-26597360
64251 chr17 45757887 45757887 1 + G T SARC 45757885 + 45757865 45757905 41 TTTGCACAGGGACTTATGTACAGCATTTGGGAAGGATGTAC TTTGCACAGGGACTTATGTACATCATTTGGGAAGGATGTAC < 41bp 0.744836320880762 0.420528138260227 0.19483429 0.13863331 prediction 0.489672641761524 Functional Loss - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45757885 chr17:45757887 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_67142 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45757863-45757984
64251 chr15 22853832 22853832 1 + G T UCEC 22853829 + 22853809 22853849 41 GGGCACCTGTGGGATGGCGCCAGGGAGTTCATCATCCAGAG GGGCACCTGTGGGATGGCGCCAGTGAGTTCATCATCCAGAG < 41bp 0.920289079937279 0.675455183723292 0.8799231 0.2806733 prediction 0.489667792427974 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22853829 chr15:22853832 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_67143 0 0 2 BUD13 POSTAR2 ENCODE chr15:22853751-22853836
64251 chr12 69652684 69652684 1 + C T COAD 69652682 + 69652662 69652702 41 TCCACTTGGGCCACCCCTTACACTAGCTCCTCCTCCGCATC TCCACTTGGGCCACCCCTTACATTAGCTCCTCCTCCGCATC < 41bp 0.817291702491892 0.572461628386025 0.319758 0.27650204 prediction 0.489660148211734 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652682 chr12:69652684 synonymous SNV . 0 23 hm5C_associated_SNPs_67144 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:69652642-69652686
64251 chr10 71860048 71860048 1 + C T UCEC 71860046 + 71860026 71860066 41 TCCCAAGGCCCTTTGGAAGTCGCCGAAGGTAAGTGTGGAAC TCCCAAGGCCCTTTGGAAGTCGTCGAAGGTAAGTGTGGAAC < 41bp 0.793593680872014 0.548769755408791 0.8436712 0.5391957 prediction 0.489647850926447 Functional Loss - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71860046 chr10:71860048 nonsynonymous SNV 0.955 2 23 hm5C_associated_SNPs_67147 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:71860033-71860052
64251 chr5 137515397 137515397 1 + G T SARC 137515395 + 137515375 137515415 41 GCAAGGGATCCTTTCTCCGCCAGCGGGCTTGCTGTCCGATG GCAAGGGATCCTTTCTCCGCCATCGGGCTTGCTGTCCGATG < 41bp 0.744816534987947 0.39147608886264 0.47090057 0.16313753 prediction 0.489633069975895 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137515395 chr5:137515397 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_67149 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137515380-137515400
64251 chr12 95656699 95656699 1 + C T UCEC 95656697 + 95656677 95656717 41 GCAAGGATATTGGATTCCGACTCGACTCATTACATACCATC GCAAGGATATTGGATTCCGACTTGACTCATTACATACCATC < 41bp 0.744814466184546 0.474705469252402 0.0059045255 0.001306504 prediction 0.489628932369091 Functional Loss - VEZT ENSG00000028203 CDS Human protein_coding chr12:95656697 chr12:95656699 synonymous SNV . 0 23 hm5C_associated_SNPs_67150 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:95656672-95656704
64251 chr9 19050016 19050016 1 + C T PAAD 19050014 + 19049994 19050034 41 ATCCTCCAGAACTCTCCTGACGCCAAAATCTTCTGCCTGGT ATCCTCCAGAACTCTCCTGACGTCAAAATCTTCTGCCTGGT < 41bp 0.802937035024367 0.55814788167755 0.12556034 0.044684798 prediction 0.489578306693633 Functional Loss - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19050014 chr9:19050016 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_67156 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:19049960-19050040
64251 chr16 1797085 1797085 1 + G T SARC 1797083 + 1797063 1797103 41 TCCTCGGCGGCCGCCACACCCAGCACCACAGGCACCAAGTC TCCTCGGCGGCCGCCACACCCATCACCACAGGCACCAAGTC < 41bp 0.744785158486986 0.39419824612665 0.87342227 0.09875202 prediction 0.489570316973973 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1797083 chr16:1797085 nonsynonymous SNV 0.917 5 23 hm5C_associated_SNPs_67158 0 0 1 UCHL5 POSTAR2 ENCODE chr16:1797030-1797087
64251 chr11 66264828 66264828 1 + C T UCEC 66264826 + 66264806 66264846 41 TGCTGGAGGCTGGCGAGGGACTCGTTACCATCACTCCCACC TGCTGGAGGCTGGCGAGGGACTTGTTACCATCACTCCCACC < 41bp 0.744784231499508 0.472438569583174 0.14726928 0.2600956 prediction 0.489568462999017 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66264826 chr11:66264828 synonymous SNV . 0 23 hm5C_associated_SNPs_67159 0 0 1 RPS3 POSTAR2 ENCODE chr11:66264827-66264866
64251 chr6 158349639 158349639 1 + A C STAD 158349635 + 158349615 158349655 41 CCGCCTTCACCCACAGAGAGCAGAAGTGCGAGGCTGTGGGG CCGCCTTCACCCACAGAGAGCAGACGTGCGAGGCTGTGGGG < 41bp 0.74478137184823 0.344483146508579 0.88417447 0.82242894 prediction 0.48956274369646 Functional Loss - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158349635 chr6:158349639 nonsynonymous SNV 0.844 3 25 hm5C_associated_SNPs_67161 0 0 4 DDX24 POSTAR2 ENCODE chr6:158349639-158349719
64251 chr1 109242492 109242492 1 + T C LIHC 109242491 + 109242471 109242511 41 TAGTCCCAGCAAAGAAAAATCTAGAAAGCGTAGTAGAAGCA TAGTCCCAGCAAAGAAAAATCCAGAAAGCGTAGTAGAAGCA < 41bp 0.752769111808743 0.507989278221995 0.06469017 0.17629075 prediction 0.489559667173496 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109242491 chr1:109242492 synonymous SNV . 0 22 hm5C_associated_SNPs_67162 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:109242457-109242587
64251 chr5 137522908 137522908 1 + A C rs17234961 137522907 + 137522887 137522927 41 CTCCAAGGCCAGGTTTCTGCCAAAAAGCGCCTTGGTACCAA CTCCAAGGCCAGGTTTCTGCCCAAAAGCGCCTTGGTACCAA < 41bp 0.758157422124711 0.513402599353996 0.49373782 0.43160897 prediction 0.489509645541431 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137522907 chr5:137522908 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_67166 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137522900-137522920
64251 chr11 44135765 44135765 1 + G C BLCA 44135761 + 44135741 44135781 41 GTTGGCTGGTGGCGGCTTTTCTACGTGGACTTACCGGCAAG GTTGGCTGGTGGCGGCTTTTCTACCTGGACTTACCGGCAAG < 41bp 0.843972435982637 0.599222969745375 0.35045373 0.21752816 prediction 0.489498932474525 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44135761 chr11:44135765 synonymous SNV . 0 25 hm5C_associated_SNPs_67167 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:44135755-44135776
64251 chr16 54967531 54967531 1 + C T BLCA 54967529 + 54967509 54967549 41 TCCAGGCGGGACGGTGCTGTCCCGGCCTCTCTACTACACCG TCCAGGCGGGACGGTGCTGTCCTGGCCTCTCTACTACACCG < 41bp 0.767820838169214 0.523076308344823 0.27694583 0.1349608 prediction 0.489489059648781 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967529 chr16:54967531 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_67170 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:54967520-54967540
64251 chr19 58118332 58118332 1 + G C HNSC 58118331 + 58118311 58118351 41 GTTGCAAAACTGACCTCATTCGACACCAGACAGTTCACACT GTTGCAAAACTGACCTCATTCCACACCAGACAGTTCACACT < 41bp 0.744734828777616 0.440179969277265 0.12063435 0.068995565 prediction 0.489469657555232 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58118331 chr19:58118332 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_67174 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58118315-58118341
64251 chr1 240370371 240370371 1 + G T STAD 240370368 + 240370348 240370388 41 ACTTCCCCCACGGAAGAGGGCGGGGTGCTGACACTGCCTCC ACTTCCCCCACGGAAGAGGGCGGTGTGCTGACACTGCCTCC < 41bp 0.744734756867752 0.348926876626938 0.5815418 0.28387243 prediction 0.489469513735504 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240370368 chr1:240370371 synonymous SNV . 0 24 hm5C_associated_SNPs_67175 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:240370347-240370377
64251 chr20 44639169 44639169 1 + C T SKCM 44639167 + 44639147 44639187 41 CCGCGGGCGGTGATTGACGACGCCTTTGCCCGCGCCTTCGC CCGCGGGCGGTGATTGACGACGTCTTTGCCCGCGCCTTCGC < 41bp 0.744729826511793 0.468565906594727 0.09445077 0.23404312 prediction 0.489459653023585 Functional Loss - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44639167 chr20:44639169 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_67177 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr20:44639164-44639182
64251 chr16 2510154 2510154 1 + G C rs186033526 2510153 + 2510133 2510173 41 CGCCGCCGCCTTCATGCTGCCGGCGGGCTGCTCGCGCCGGT CGCCGCCGCCTTCATGCTGCCCGCGGGCTGCTCGCGCCGGT < 41bp 0.863145020357444 0.61842580417258 0.8622667 0.32594597 prediction 0.489438432369729 Functional Loss - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2510153 chr16:2510154 synonymous SNV . 0 22 hm5C_associated_SNPs_67178 0 0 1 DDX3X POSTAR2 ENCODE chr16:2510141-2510173
64251 chr13 113975948 113975948 1 + G A COAD 113975945 + 113975925 113975965 41 GGCAATTCCTACAAGTGCAACGCGGAGGAGCACGTCCGTGT GGCAATTCCTACAAGTGCAACGCAGAGGAGCACGTCCGTGT < 41bp 0.747970503400806 0.50326823492949 0.20390186 0.07303974 prediction 0.489404536942632 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113975945 chr13:113975948 synonymous SNV . 0 24 hm5C_associated_SNPs_67184 0 0 6 RPS3 POSTAR2 ENCODE chr13:113975941-113975954
64251 chr3 57843845 57843845 1 + C T COAD 57843843 + 57843823 57843863 41 AGATGAAGATAGACTCTTATCACGGTTAGAAGTTATGGGAA AGATGAAGATAGACTCTTATCATGGTTAGAAGTTATGGGAA < 41bp 0.791457389526066 0.546780103443753 0.7941593 0.78873044 prediction 0.489354572164627 Functional Loss - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57843843 chr3:57843845 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_67193 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr3:57843832-57843853
64251 chr6 36652272 36652272 1 + G T BLCA 36652270 + 36652250 36652290 41 GGAGCAGGCTGAAGGGTCCCCAGGTGGACCTGGAGACTCTC GGAGCAGGCTGAAGGGTCCCCATGTGGACCTGGAGACTCTC < 41bp 0.744663457735859 0.421861660078649 0.92774296 0.4676709 prediction 0.489326915471719 Functional Loss - CDKN1A ENSG00000124762 CDS Human protein_coding chr6:36652270 chr6:36652272 nonsynonymous SNV 0.967 1 23 hm5C_associated_SNPs_67196 0 0 4 GRSF1 POSTAR2 ENCODE chr6:36652214-36652299
64251 chr19 3765212 3765212 1 + T C COAD 3765211 + 3765191 3765231 41 GTGCAGTGACCAGCGAGGCCCTCAAGGACCCCGACGTATGC GTGCAGTGACCAGCGAGGCCCCCAAGGACCCCGACGTATGC < 41bp 0.80185579600718 0.557194723314527 0.5270946 0.224484 prediction 0.489322145385306 Functional Loss - MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3765211 chr19:3765212 nonsynonymous SNV 0.337 3 22 hm5C_associated_SNPs_67198 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:3765186-3765230
64251 chr20 43566728 43566728 1 + G A HNSC 43566725 + 43566705 43566745 41 AGCGTCTCTACCCCCTTATCCATGATGTCCACACCCAGCTG AGCGTCTCTACCCCCTTATCCATAATGTCCACACCCAGCTG < 41bp 0.768305565683187 0.523657559629713 0.08977181 0.060720205 prediction 0.489296012106946 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566725 chr20:43566728 nonsynonymous SNV 0.078 0 24 hm5C_associated_SNPs_67199 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:43566720-43566740
64251 chr22 50962824 50962824 1 - C G LUAD 50962825 - 50962805 50962845 41 GATCCATGCTGCTGCTGACTCGGAGCCCCACAGCTTGGCAC GATCCATGCTGCTGCTGACTCCGAGCCCCACAGCTTGGCAC < 41bp 0.851495154005746 0.60684912185421 0.90619576 0.60979545 prediction 0.489292064303073 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962825 chr22:50962824 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_67200 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:50962811-50962849
64251 chr1 223940636 223940636 1 + G T LUAD 223940633 + 223940613 223940653 41 AACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCAGGAACTA AACTGGAGGCGGGGCTCCACCGCTGGAGGTTGCAGGAACTA < 41bp 0.91086202597746 0.666218365128702 0.89389586 0.32909894 prediction 0.489287321697517 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223940633 chr1:223940636 synonymous SNV . 0 24 hm5C_associated_SNPs_67202 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:223940602-223940640
64251 chr19 50154541 50154541 1 + G C CESC 50154537 + 50154517 50154557 41 TCCCAGAGCATCAGCCGCATCTCGGAGACCCTGGCGGGCAT TCCCAGAGCATCAGCCGCATCTCGCAGACCCTGGCGGGCAT < 41bp 0.818117229188266 0.573498845166161 0.60950947 0.4025026 prediction 0.48923676804421 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154537 chr19:50154541 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_67209 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:50154491-50154558
64251 chr16 89284292 89284292 1 + G C rs188881219 89284291 + 89284271 89284311 41 GCCGCCGCTCGCGGTAGACCCGGGCAGCGCTTCCATTCCGC GCCGCCGCTCGCGGTAGACCCCGGCAGCGCTTCCATTCCGC < 41bp 0.808438022638834 0.563820851460843 0.90627056 0.5346895 prediction 0.489234342355981 Functional Loss - ZNF778 ENSG00000170100 UTR5 Human protein_coding chr16:89284291 chr16:89284292 . . 0 22 hm5C_associated_SNPs_67210 0 0 1 BUD13 POSTAR2 ENCODE chr16:89284280-89284356
64251 chr1 44442294 44442294 1 + G T TGCT 44442292 + 44442272 44442312 41 TGTGAGGCTGTGGCCATCTACGGCATCATCATGGCAATTGT TGTGAGGCTGTGGCCATCTACGTCATCATCATGGCAATTGT < 41bp 0.88474278251837 0.640141427184635 0.17653033 0.033818126 prediction 0.489202710667469 Functional Loss - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44442292 chr1:44442294 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_67219 0 0 17 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:44442260-44442300
64251 chrX 41205597 41205597 1 + G T SARC 41205595 + 41205575 41205615 41 GCATCCATGGAGACCGTTCTCAGAGGGATAGAGAAGAGGCC GCATCCATGGAGACCGTTCTCATAGGGATAGAGAAGAGGCC < 41bp 0.744599637413255 0.399528963892501 0.93974423 0.85290706 prediction 0.48919927482651 Functional Loss - DDX3X ENSG00000215301 CDS Human protein_coding chrX:41205595 chrX:41205597 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_67220 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:41205482-41205631
64251 chr1 32671293 32671293 1 + A T BLCA 32671289 + 32671269 32671309 41 GGCAGTTGGCGCCCATGGAGCCAGAGCTGCTGGTTCGGAAG GGCAGTTGGCGCCCATGGAGCCAGTGCTGCTGGTTCGGAAG < 41bp 0.744595964964632 0.456656733684887 0.6932945 0.38727567 prediction 0.489191929929264 Functional Loss - IQCC ENSG00000160051 CDS Human protein_coding chr1:32671289 chr1:32671293 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_67223 0 0 1 DDX3X POSTAR2 ENCODE chr1:32671271-32671345
64251 chr12 96350678 96350678 1 + C T COAD 96350676 + 96350656 96350696 41 AGATGCTGCGCGTGATTGAGCGCGCCCGGCGGGAGCTGGAC AGATGCTGCGCGTGATTGAGCGTGCCCGGCGGGAGCTGGAC < 41bp 0.784922849349638 0.540329933144646 0.33236256 0.1749847 prediction 0.489185832409984 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350676 chr12:96350678 synonymous SNV . 0 23 hm5C_associated_SNPs_67225 0 0 2 BUD13 POSTAR2 ENCODE chr12:96350674-96350768
64251 chr2 29117667 29117667 1 + G C BLCA 29117666 + 29117646 29117686 41 TACTTCGCTTTGGCCTCTACCGACGGTCACTTACGAGTATG TACTTCGCTTTGGCCTCTACCCACGGTCACTTACGAGTATG < 41bp 0.850938241775694 0.606351560693588 0.9385682 0.8927646 prediction 0.489173362164213 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29117666 chr2:29117667 nonsynonymous SNV 0.894 4 22 hm5C_associated_SNPs_67228 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:29117643-29117671
64251 chr19 58991638 58991638 1 - C A rs36095067 58991641 - 58991621 58991661 41 CCCTGGGCGCACAGTGGGGGCAGGAGTGGCAGCCCCAGACA CCCTGGGCGCACAGTGGGGGCAGTAGTGGCAGCCCCAGACA < 41bp 0.819068793656304 0.574483922230347 0.90952563 0.87738675 prediction 0.489169742851916 Functional Loss - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58991641 chr19:58991638 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_67229 0 0 12 CDC40 POSTAR2 ENCODE chr19:58991603-58991680
64251 chr1 46033700 46033700 1 + T C STAD 46033699 + 46033679 46033719 41 AATGCTGATGGGACTATATGCTACGACTCCACCCACTACAA AATGCTGATGGGACTATATGCCACGACTCCACCCACTACAA < 41bp 0.758005375745513 0.513423967052912 0.05785033 0.027264714 prediction 0.489162817385202 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033699 chr1:46033700 nonsynonymous SNV 0.434 1 22 hm5C_associated_SNPs_67231 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46033684-46033710
64251 chr7 128457885 128457885 1 + G T LUSC 128457883 + 128457863 128457903 41 GTGGTCATCTCGGCTTTGCTCTGGTGCTGGTGGGCTGAGAC GTGGTCATCTCGGCTTTGCTCTTGTGCTGGTGGGCTGAGAC < 41bp 0.744579389039359 0.403604310433068 0.7907263 0.30230337 prediction 0.489158778078718 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128457883 chr7:128457885 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_67233 0 0 1 HNRNPM POSTAR2 ENCODE chr7:128457867-128457920
64251 chr6 36169261 36169261 1 + C T COAD 36169259 + 36169239 36169279 41 TGCCTACTGTGAGGCCCACTCGCCACCAGGTGCGGCCACTG TGCCTACTGTGAGGCCCACTCGTCACCAGGTGCGGCCACTG < 41bp 0.819135736937287 0.574566623337951 0.12739274 0.02314344 prediction 0.489138227198673 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36169259 chr6:36169261 nonsynonymous SNV 0.101 4 23 hm5C_associated_SNPs_67235 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:36169260-36169290
64251 chrX 57620234 57620234 1 + G T UCEC 57620232 + 57620212 57620252 41 TCTCTTAGCTCAGCTAGAAGCAGCAAATTCTCTCACACCCA TCTCTTAGCTCAGCTAGAAGCATCAAATTCTCTCACACCCA < 41bp 0.744547165683884 0.413048812578562 0.16513634 0.08104053 prediction 0.489094331367768 Functional Loss - ZXDB ENSG00000198455 CDS Human protein_coding chrX:57620232 chrX:57620234 nonsynonymous SNV 0.989 0 23 hm5C_associated_SNPs_67240 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chrX:57620220-57620240
64251 chr16 28909708 28909708 1 + G A UCEC 28909705 + 28909685 28909725 41 GCGCTGCTTGGCCCTGGCCACCCGGGACACCCCCCCGAAGC GCGCTGCTTGGCCCTGGCCACCCAGGACACCCCCCCGAAGC < 41bp 0.751494580090696 0.506948546448232 0.3417061 0.055903763 prediction 0.489092067284927 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28909705 chr16:28909708 nonsynonymous SNV 0.796 2 24 hm5C_associated_SNPs_67242 0 0 3 EIF3H POSTAR2 ENCODE chr16:28909674-28909708
64251 chr10 4877979 4877979 1 + C T UCEC 4877977 + 4877957 4877997 41 AACATGGTTATTCCCAGTGACACGGACTTCCTGGACACGTG AACATGGTTATTCCCAGTGACATGGACTTCCTGGACACGTG < 41bp 0.758056006186334 0.513514655815697 0.23198381 0.20608932 prediction 0.489082700741275 Functional Loss - AKR1E2 ENSG00000165568 CDS Human protein_coding chr10:4877977 chr10:4877979 nonsynonymous SNV 0.034 4 23 hm5C_associated_SNPs_67245 0 0 1 DDX24 POSTAR2 ENCODE chr10:4877930-4878003
64251 chr1 168037605 168037605 1 + C T UCEC 168037603 + 168037583 168037623 41 ACTTGCCTTGTAGGTTATAACTCGAAACGAACTCATGCTGG ACTTGCCTTGTAGGTTATAACTTGAAACGAACTCATGCTGG < 41bp 0.832786279021721 0.588285741651077 0.91039443 0.17004073 prediction 0.489001074741288 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168037603 chr1:168037605 stopgain 0.998 0 23 hm5C_associated_SNPs_67253 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:168037600-168037631
64251 chr4 134084246 134084246 1 + G T LUAD 134084244 + 134084224 134084264 41 CGCCAGGCTGCTGATTATCGCAGCAATCTGCATGTTCCTGG CGCCAGGCTGCTGATTATCGCATCAATCTGCATGTTCCTGG < 41bp 0.744498277170686 0.402106027664232 0.8917631 0.5030862 prediction 0.488996554341372 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134084244 chr4:134084246 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_67254 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:134084245-134084246
64251 chr20 42089177 42089177 1 + C T UCEC 42089175 + 42089155 42089195 41 GTCTCGATCTAGAAGACGGTCACGAAGTAGGAGTCGCAGGA GTCTCGATCTAGAAGACGGTCATGAAGTAGGAGTCGCAGGA < 41bp 0.830706783200154 0.586209235872685 0.33740276 0.4413712 prediction 0.488995094654938 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089175 chr20:42089177 stopgain 1.000 1 23 hm5C_associated_SNPs_67255 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003589 chr20:42089156-42089177
64251 chr17 43171164 43171164 1 + G C LUAD 43171163 + 43171143 43171183 41 ATGCTTTGGACCTGGGCGATCGTGGTGTGGTGAGTGGGCCC ATGCTTTGGACCTGGGCGATCCTGGTGTGGTGAGTGGGCCC < 41bp 0.7444954326932 0.427834073893264 0.90954494 0.85013336 prediction 0.4889908653864 Functional Loss - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43171163 chr17:43171164 nonsynonymous SNV 0.992 0 22 hm5C_associated_SNPs_67257 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:43171141-43171164
64251 chr13 53217246 53217246 1 + G A SKCM 53217243 + 53217223 53217263 41 CTGGAAACTTTGGTGGTGGTCGTGGAGATGGTTTCGGTGGG CTGGAAACTTTGGTGGTGGTCGTAGAGATGGTTTCGGTGGG < 41bp 0.744494478090631 0.496535954972582 0.8781835 0.8629967 prediction 0.488988956181261 Functional Loss - HNRNPA1L2 ENSG00000139675 CDS Human protein_coding chr13:53217243 chr13:53217246 nonsynonymous SNV 0.366 1 24 hm5C_associated_SNPs_67258 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:53217208-53217250
64251 chr16 1709935 1709935 1 + G A rs200608756 1709932 + 1709912 1709952 41 CAGCCTCAGTAAGGCCCGCCCAGGAGGAGCAGTCGATGACG CAGCCTCAGTAAGGCCCGCCCAGAAGGAGCAGTCGATGACG < 41bp 0.756097700592778 0.511604367056583 0.9017111 0.33159006 prediction 0.488986667072391 Functional Loss - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1709932 chr16:1709935 nonsynonymous SNV 0.749 3 24 hm5C_associated_SNPs_67259 0 0 1 UCHL5 POSTAR2 ENCODE chr16:1709884-1709947
64251 chr2 28631709 28631709 1 + G T STAD 28631707 + 28631687 28631727 41 CCAAGTGCCGGAACCGACGCCGGGAGCTGACAGAGAAGCTG CCAAGTGCCGGAACCGACGCCGTGAGCTGACAGAGAAGCTG < 41bp 0.89480530866315 0.650313012138018 0.86637366 0.38331896 prediction 0.488984593050265 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28631707 chr2:28631709 synonymous SNV . 0 23 hm5C_associated_SNPs_67262 0 0 3 BUD13 POSTAR2 ENCODE chr2:28631621-28631709
64251 chr1 223962943 223962943 1 + C T rs12043790 223962941 + 223962921 223962961 41 ATTGAGTCGCTCTCAAAGGACACGAGGCCCTTGGCAGGGAA ATTGAGTCGCTCTCAAAGGACATGAGGCCCTTGGCAGGGAA < 41bp 0.754691739687 0.510199464565707 0.13589233 0.24241778 prediction 0.488984550242587 Functional Loss - CAPN2 ENSG00000162909 UTR3 Human protein_coding chr1:223962941 chr1:223962943 . . 0 23 hm5C_associated_SNPs_67263 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:223962913-223962943
64251 chr2 10560261 10560261 1 + G T STAD 10560259 + 10560239 10560279 41 GCGAGATGCTGGAGATCGTGCAGGTACCGGCGCCCGAGGCC GCGAGATGCTGGAGATCGTGCATGTACCGGCGCCCGAGGCC < 41bp 0.744472381366806 0.388837881379159 0.4640252 0.31257004 prediction 0.488944762733611 Functional Loss - HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10560259 chr2:10560261 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_67271 0 0 1 PRPF8 POSTAR2 ENCODE chr2:10560243-10560301
64251 chr1 244217415 244217415 1 + C T rs151264221 244217413 + 244217393 244217433 41 TGCTAGCAGCTGCCAGTTATCTCCACATGTATGACATTGTC TGCTAGCAGCTGCCAGTTATCTTCACATGTATGACATTGTC < 41bp 0.824282528088007 0.579810920102074 0.93260527 0.42968133 prediction 0.488943215971867 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217413 chr1:244217415 synonymous SNV . 0 23 hm5C_associated_SNPs_67272 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:244217392-244217418
64251 chr2 238990408 238990408 1 + C T COAD 238990406 + 238990386 238990426 41 AGGCAGAGGTGGACGACATCCTCGCGGCAGTCCGCCCGACC AGGCAGAGGTGGACGACATCCTTGCGGCAGTCCGCCCGACC < 41bp 0.815662119014688 0.571191135585851 0.105163366 0.18696684 prediction 0.488941966857675 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990406 chr2:238990408 synonymous SNV . 0 23 hm5C_associated_SNPs_67273 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:238990408-238990409
64251 chr2 99181149 99181149 1 + T C UCEC 99181148 + 99181128 99181168 41 TCATTAAGCTGAGGAACTGCCTGCATGACGACGGCTTCCTG TCATTAAGCTGAGGAACTGCCCGCATGACGACGGCTTCCTG < 41bp 0.787061428244404 0.542593967543593 0.723385 0.17573625 prediction 0.488934921401621 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99181148 chr2:99181149 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_67275 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:99181135-99181151
64251 chr17 40933287 40933287 1 + G A SKCM 40933284 + 40933264 40933304 41 GCTCCTTCAAGACGGTGTATCGAGGGCTAGACACCGACACC GCTCCTTCAAGACGGTGTATCGAAGGCTAGACACCGACACC < 41bp 0.746719122497973 0.502254611263379 0.93882495 0.91205966 prediction 0.488929022469187 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40933284 chr17:40933287 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_67277 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:40933250-40933289
64251 chr11 248825 248825 1 + C T UCEC 248823 + 248803 248843 41 CGCTGGGGCTAGCAGGACTTCTCGGCGAGGGAGTTTTTAAC CGCTGGGGCTAGCAGGACTTCTTGGCGAGGGAGTTTTTAAC < 41bp 0.827047513306265 0.58259195973077 0.51403105 0.40703917 prediction 0.488911107150989 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:248823 chr11:248825 synonymous SNV . 0 23 hm5C_associated_SNPs_67281 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:248818-248838
64251 chr22 18022247 18022247 1 + C T COAD 18022245 + 18022225 18022265 41 CCTCTCACCAGCCTCGCACTCTCGGTCACGTGATGGATTCC CCTCTCACCAGCCTCGCACTCTTGGTCACGTGATGGATTCC < 41bp 0.744451636811219 0.46286391478991 0.08462283 0.096678644 prediction 0.488903273622439 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18022245 chr22:18022247 synonymous SNV . 0 23 hm5C_associated_SNPs_67285 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr22:18022241-18022260
64251 chr13 28240013 28240013 1 + C T STAD 28240011 + 28239991 28240031 41 TTACAAGCACAGCTTCCGCGCTCGAGGTTCCGCCAGTTACT TTACAAGCACAGCTTCCGCGCTTGAGGTTCCGCCAGTTACT < 41bp 0.795518959175419 0.551070057985144 0.16348764 0.17529738 prediction 0.488897802380552 Functional Loss - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28240011 chr13:28240013 stopgain 0.005 0 23 hm5C_associated_SNPs_67286 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:28240000-28240024
64251 chr4 20706381 20706381 1 + G T LUSC 20706379 + 20706359 20706399 41 GTCAACCAGTTCTCCAGAGTCTGCAAGAAAACTTCATCCTA GTCAACCAGTTCTCCAGAGTCTTCAAGAAAACTTCATCCTA < 41bp 0.841975930491816 0.597527223357544 0.67233014 0.6455047 prediction 0.488897414268544 Functional Loss - PACRGL ENSG00000163138 CDS Human protein_coding chr4:20706379 chr4:20706381 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_67287 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:20706358-20706393
64251 chr21 45096639 45096639 1 + C T UCEC 45096637 + 45096617 45096657 41 CACCCTGGTACAGACCATAGCTCGGGGTGTCTTCGAAGCTA CACCCTGGTACAGACCATAGCTTGGGGTGTCTTCGAAGCTA < 41bp 0.822912434758391 0.578467876598402 0.4167097 0.44963464 prediction 0.488889116319979 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45096637 chr21:45096639 nonsynonymous SNV 0.282 1 23 hm5C_associated_SNPs_67288 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr21:45096620-45096640
64251 chr17 37358657 37358657 1 + C T KIRP 37358655 + 37358635 37358675 41 CGGGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGG CGGGCTCGATGCCGGAAAAACATCTTGGCCCGCCGGAAGGG < 41bp 0.744429823246479 0.47403982957121 0.13653025 0.12589446 prediction 0.488859646492959 Functional Loss - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358655 chr17:37358657 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_67292 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:37358640-37358660
64251 chr19 1272348 1272348 1 + G A STAD 1272345 + 1272325 1272365 41 GTTGCTCCCCGGCCGCAGGCCGCGCCCTGGTCTGGCCTCTG GTTGCTCCCCGGCCGCAGGCCGCACCCTGGTCTGGCCTCTG < 41bp 0.744662362444318 0.500240397478968 0.362408 0.15651804 prediction 0.488843929930701 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272345 chr19:1272348 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_67296 0 0 7 BUD13 POSTAR2 ENCODE chr19:1272315-1272370
64251 chr17 45747095 45747095 1 + G T SARC 45747092 + 45747072 45747112 41 AAGACCCCAGTGTAGTTGTTCGAGATACAGCTGCATGGACT AAGACCCCAGTGTAGTTGTTCGATATACAGCTGCATGGACT < 41bp 0.744421896437302 0.355506966147753 0.7441292 0.30667716 prediction 0.488843792874604 Functional Loss - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45747092 chr17:45747095 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_67297 0 0 45 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45747039-45747124
64251 chr20 35812692 35812692 1 + G T LUAD 35812690 + 35812670 35812710 41 TGGAGAGACTAAAAGCCTCGCTGGATCGCCCTTTCACAAAT TGGAGAGACTAAAAGCCTCGCTTGATCGCCCTTTCACAAAT < 41bp 0.887377315478345 0.642957825981731 0.037782013 0.005361438 prediction 0.488838978993228 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35812690 chr20:35812692 synonymous SNV . 0 23 hm5C_associated_SNPs_67300 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:35812680-35812740
64251 chr4 96075811 96075811 1 + A T UCEC 96075807 + 96075787 96075827 41 TTGCCAAAATGTCAGAGTCCCAGGACATTAAACTCTGATAG TTGCCAAAATGTCAGAGTCCCAGGTCATTAAACTCTGATAG < 41bp 0.744406854025763 0.458907213827217 0.46119845 0.39968923 prediction 0.488813708051526 Functional Loss - BMPR1B ENSG00000138696 CDS Human protein_coding chr4:96075807 chr4:96075811 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_67308 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:96075789-96075822
64251 chr22 46704467 46704467 1 + G A rs141545267 46704464 + 46704444 46704484 41 AGCTGCCAAGCCTGAAGACCCTCGGAGCCAGGGCGTGGAAA AGCTGCCAAGCCTGAAGACCCTCAGAGCCAGGGCGTGGAAA < 41bp 0.769375612243653 0.52497138997253 0.3146721 0.09306413 prediction 0.488808444542247 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704464 chr22:46704467 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_67310 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:46704460-46704480
64251 chr13 111371924 111371924 1 + C T STAD 111371922 + 111371902 111371942 41 AACAACGAGAACCGTGAGAACGCGTCCAGCAACCACGACCA AACAACGAGAACCGTGAGAACGTGTCCAGCAACCACGACCA < 41bp 0.77048396743011 0.526083261111536 0.15585563 0.10264814 prediction 0.488801412637147 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371922 chr13:111371924 nonsynonymous SNV 0.891 1 23 hm5C_associated_SNPs_67312 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr13:111371900-111371930
64251 chr17 38327176 38327176 1 + A T rs548533439 38327172 + 38327152 38327192 41 CTTCTGGTTTTCTAGCCCCTCTGGATTCCCTTTTGACTCTT CTTCTGGTTTTCTAGCCCCTCTGGTTTCCCTTTTGACTCTT < 41bp 0.744398904077065 0.423814050141394 0.6771109 0.16572243 prediction 0.48879780815413 Functional Loss - CASC3 ENSG00000108349 UTR3 Human protein_coding chr17:38327172 chr17:38327176 . . 0 25 hm5C_associated_SNPs_67313 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38327135-38327207
64251 chrX 67938390 67938390 1 + G A LUAD 67938387 + 67938367 67938407 41 CATGAATGAGGCTGAGGCTGCGGGGCCCCTGGCTGGACTCC CATGAATGAGGCTGAGGCTGCGGAGCCCCTGGCTGGACTCC < 41bp 0.762002592666169 0.517611132682558 0.94312876 0.93281513 prediction 0.488782919967223 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67938387 chrX:67938390 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_67316 0 0 1 FMR1 POSTAR2 ENCODE chrX:67938371-67938417
64251 chr3 42633077 42633077 1 + G T LUAD 42633074 + 42633054 42633094 41 TGGAGTATCAGAACAAGGGCCGCGGGAACGAGTGCGTGCAG TGGAGTATCAGAACAAGGGCCGCTGGAACGAGTGCGTGCAG < 41bp 0.916228824563323 0.671838750366253 0.6524462 0.3539339 prediction 0.488780148394141 Functional Loss - SS18L2 ENSG00000008324 CDS Human protein_coding chr3:42633074 chr3:42633077 nonsynonymous SNV 0.860 2 24 hm5C_associated_SNPs_67317 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:42633031-42633081
64251 chr6 3106154 3106154 1 + G T UCEC 3106151 + 3106131 3106171 41 TGGAACAAGACCACTGGATCCAGGAACAGCAGGTCCCAGAG TGGAACAAGACCACTGGATCCAGTAACAGCAGGTCCCAGAG < 41bp 0.912868037093415 0.668480247297716 0.89435554 0.15082848 prediction 0.488775579591399 Functional Loss - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3106151 chr6:3106154 nonsynonymous SNV 0.275 1 24 hm5C_associated_SNPs_67319 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:3106123-3106155
64251 chr19 11040263 11040263 1 + C T rs117203028 11040261 + 11040241 11040281 41 AAGTACAAGCCTGTCGTGCTCACCGACGATCAGGTGGACCA AAGTACAAGCCTGTCGTGCTCATCGACGATCAGGTGGACCA < 41bp 0.744367621216266 0.48599608348871 0.06761721 0.093785554 prediction 0.488735242432532 Functional Loss - TIMM29 ENSG00000142444 CDS Human protein_coding chr19:11040261 chr19:11040263 nonsynonymous SNV 0.829 1 23 hm5C_associated_SNPs_67326 0 0 5 HNRNPC POSTAR2 SRX1438577 chr19:11040260-11040276
64251 chr1 161719736 161719736 1 + A T rs146495672 161719732 + 161719712 161719752 41 GCCGTCGCGGAGCCAGATCACCTGAGGGAAGCGGGCATCAC GCCGTCGCGGAGCCAGATCACCTGTGGGAAGCGGGCATCAC < 41bp 0.851305161551979 0.606942445110049 0.84703255 0.3903738 prediction 0.488725432883862 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719732 chr1:161719736 nonsynonymous SNV 0.849 3 25 hm5C_associated_SNPs_67329 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161719715-161719737
64251 chrX 48678558 48678558 1 + C T COAD 48678556 + 48678536 48678576 41 CTCAGCTGGCTTTGATGCTGCACGGGGGGATCCGCTGGGGG CTCAGCTGGCTTTGATGCTGCATGGGGGGATCCGCTGGGGG < 41bp 0.767568246859308 0.523205615260647 0.6374059 0.890311 prediction 0.488725263197322 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678556 chrX:48678558 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_67330 0 0 3 EIF3H POSTAR2 ENCODE chrX:48678530-48678610
64251 chr16 30776301 30776301 1 + G A rs186930335 30776298 + 30776278 30776318 41 TGAGGCGGCTCAGGCACACACCCGAGAGCTGGGCCGTGAGA TGAGGCGGCTCAGGCACACACCCAAGAGCTGGGCCGTGAGA < 41bp 0.745051973606056 0.50068976787284 0.18731517 0.12905172 prediction 0.488724411466432 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30776298 chr16:30776301 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_67331 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30776300-30776320
64251 chr14 45369771 45369771 1 + A T LUAD 45369767 + 45369747 45369787 41 GCTGGCCGCAAAGCAGTATCCTGTACACCACTCTATGTTGA GCTGGCCGCAAAGCAGTATCCTGTTCACCACTCTATGTTGA < 41bp 0.744346043154705 0.419349765117112 0.00392282 0.004354596 prediction 0.48869208630941 Functional Loss - C14orf28 ENSG00000179476 CDS Human protein_coding chr14:45369767 chr14:45369771 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_67336 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:45369759-45369783
64251 chr13 114164726 114164726 1 + G T LUAD 114164724 + 114164704 114164744 41 GGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGTAGG GGTTCCTCATGGGCAGTGCTCGTGGTGACAAAGAAGGTAGG < 41bp 0.896969433506558 0.652625806720298 0.95645887 0.88910186 prediction 0.488687253572521 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114164724 chr13:114164726 synonymous SNV . 0 23 hm5C_associated_SNPs_67337 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr13:114164712-114164730
64251 chr11 67052795 67052795 1 + C T UCEC 67052793 + 67052773 67052813 41 TGCAGTGGAAGAAGGAGCTGCGCGACGCCTACCGCGAGGCC TGCAGTGGAAGAAGGAGCTGCGTGACGCCTACCGCGAGGCC < 41bp 0.754392830604242 0.510055322518633 0.741712 0.7276524 prediction 0.488675016171217 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67052793 chr11:67052795 synonymous SNV . 0 23 hm5C_associated_SNPs_67338 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67052775-67052823
64251 chr15 52074974 52074974 1 + C T UCEC 52074972 + 52074952 52074992 41 AGGCTCTGGAGACCAACACTCACGTGAAGAAGTTCAGCCTG AGGCTCTGGAGACCAACACTCATGTGAAGAAGTTCAGCCTG < 41bp 0.7443372763401 0.468915178867013 0.29431766 0.32842636 prediction 0.488674552680201 Functional Loss - TMOD2 ENSG00000128872 CDS Human protein_coding chr15:52074972 chr15:52074974 synonymous SNV . 0 23 hm5C_associated_SNPs_67339 0 0 2 ZNF622 POSTAR2 ENCODE chr15:52074925-52075026
64251 chr8 146067482 146067482 1 + A T rs143516383 146067478 + 146067458 146067498 41 CCACCATCAGAGAATCCACACAGGAGAGAGGCCCTATGGTT CCACCATCAGAGAATCCACACAGGTGAGAGGCCCTATGGTT < 41bp 0.848846110620561 0.60450968126746 0.43591565 0.6907656 prediction 0.488672858706202 Functional Loss - ZNF7 ENSG00000147789 CDS Human protein_coding chr8:146067478 chr8:146067482 synonymous SNV . 0 25 hm5C_associated_SNPs_67340 0 0 1 GRWD1 POSTAR2 ENCODE chr8:146067477-146067567
64251 chr5 145435588 145435588 1 + C T UCEC 145435586 + 145435566 145435606 41 TCCCGGAGCCCTGGTCTCTACACCACATGGACGTTATCCAC TCCCGGAGCCCTGGTCTCTACATCACATGGACGTTATCCAC < 41bp 0.744331794638712 0.44998784902773 0.06548002 0.0745804 prediction 0.488663589277425 Functional Loss - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145435586 chr5:145435588 nonsynonymous SNV 0.871 1 23 hm5C_associated_SNPs_67342 0 0 1 U2AF2 POSTAR2 ENCODE chr5:145435536-145435599
64251 chr10 75552247 75552247 1 + C T UCEC 75552245 + 75552225 75552265 41 GCCCTCCACCCTGTCCTCTCCACGGTGGCTCCCGAGGCCCT GCCCTCCACCCTGTCCTCTCCATGGTGGCTCCCGAGGCCCT < 41bp 0.763184237278553 0.518864612190642 0.5366012 0.26799443 prediction 0.488639250175822 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75552245 chr10:75552247 synonymous SNV . 0 23 hm5C_associated_SNPs_67346 0 0 3 RBM15 POSTAR2 ENCODE chr10:75552206-75552264
64251 chr12 27933767 27933767 1 + C T PCPG 27933765 + 27933745 27933785 41 TGTGCAAGCCCCAGTTCCACCTCCTGGGGTCTCCTCCCCAA TGTGCAAGCCCCAGTTCCACCTTCTGGGGTCTCCTCCCCAA < 41bp 0.793568431993104 0.549255051124303 0.31080413 0.23476514 prediction 0.488626761737603 Functional Loss - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933765 chr12:27933767 synonymous SNV . 0 23 hm5C_associated_SNPs_67348 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:27933758-27933786
64251 chrX 153657478 153657478 1 + G T LUSC 153657476 + 153657456 153657496 41 CTACCTACTTAGATCCCGCCCTGGAGCTGGGTCCCAGGAAT CTACCTACTTAGATCCCGCCCTTGAGCTGGGTCCCAGGAAT < 41bp 0.88533486506452 0.641024243271057 0.24912688 0.12131137 prediction 0.488621243586927 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153657476 chrX:153657478 synonymous SNV . 0 23 hm5C_associated_SNPs_67349 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:153657460-153657480
64251 chr15 89172497 89172497 1 + C T LUAD 89172495 + 89172475 89172515 41 GGCAAGGTGGTGGTGGGGCACGCGCTGCACAACGACTTCCA GGCAAGGTGGTGGTGGGGCACGTGCTGCACAACGACTTCCA < 41bp 0.74430972640452 0.472713124578861 0.072532356 0.15483415 prediction 0.48861945280904 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89172495 chr15:89172497 nonsynonymous SNV 0.417 4 23 hm5C_associated_SNPs_67351 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:89172463-89172502
64251 chr15 89172498 89172498 1 + G T LUSC 89172495 + 89172475 89172515 41 GGCAAGGTGGTGGTGGGGCACGCGCTGCACAACGACTTCCA GGCAAGGTGGTGGTGGGGCACGCTCTGCACAACGACTTCCA < 41bp 0.74430972640452 0.343596519945416 0.072532356 0.029410511 prediction 0.48861945280904 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89172495 chr15:89172498 synonymous SNV . 0 24 hm5C_associated_SNPs_67352 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:89172463-89172502
64251 chr6 31473478 31473478 1 + A C rs202130166 31473474 + 31473454 31473494 41 GGTTTCTCGCTGAGGGACATCTGGATGGTCAGCCCTTCCTG GGTTTCTCGCTGAGGGACATCTGGCTGGTCAGCCCTTCCTG < 41bp 0.744304083517994 0.474574014972638 0.91116583 0.87108266 prediction 0.488608167035988 Functional Loss - MICB ENSG00000204516 CDS Human protein_coding chr6:31473474 chr6:31473478 nonsynonymous SNV 0.081 3 25 hm5C_associated_SNPs_67353 0 0 1 GRWD1 POSTAR2 ENCODE chr6:31473399-31473509
64251 chr20 34827963 34827963 1 + T C STAD 34827962 + 34827942 34827982 41 TCCCTCCAGGCATCCACTTCCTCCACTACAGCTCTGTGGAC TCCCTCCAGGCATCCACTTCCCCCACTACAGCTCTGTGGAC < 41bp 0.816021243025869 0.571721191801953 0.909885 0.0150977075 prediction 0.488600102447832 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34827962 chr20:34827963 nonsynonymous SNV 0.976 4 22 hm5C_associated_SNPs_67355 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:34827935-34827973
64251 chr19 10395209 10395209 1 + G A rs201383296 10395206 + 10395186 10395226 41 GTTCCAGCCCAGCCACTGGGCCCGAGGGCCCAGCTCCTGCT GTTCCAGCCCAGCCACTGGGCCCAAGGGCCCAGCTCCTGCT < 41bp 0.744962104954494 0.500676249428157 0.2318489 0.07801247 prediction 0.488571711052675 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395206 chr19:10395209 synonymous SNV . 0 24 hm5C_associated_SNPs_67359 0 0 5 RPS3 POSTAR2 ENCODE chr19:10395185-10395236
64251 chr12 69968447 69968447 1 + G T LUAD 69968445 + 69968425 69968465 41 AAATAGAATATTCAAGGCGTCGGGACTGTACACCAACAGTC AAATAGAATATTCAAGGCGTCGTGACTGTACACCAACAGTC < 41bp 0.744278725266743 0.435732248427164 0.2872752 0.074956566 prediction 0.488557450533487 Functional Loss - FRS2 ENSG00000166225 CDS Human protein_coding chr12:69968445 chr12:69968447 synonymous SNV . 0 23 hm5C_associated_SNPs_67363 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:69968427-69968456
64251 chr19 36245159 36245159 1 + G A LUAD 36245156 + 36245136 36245176 41 TGTCCATGCAGCCCTCTGAGCCCGAGCCCTCACCCTCCACA TGTCCATGCAGCCCTCTGAGCCCAAGCCCTCACCCTCCACA < 41bp 0.756647668073101 0.512382246125785 0.5049492 0.20564601 prediction 0.488530843894633 Functional Loss - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36245156 chr19:36245159 nonsynonymous SNV 0.285 0 24 hm5C_associated_SNPs_67369 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:36245113-36245166
64251 chr11 65338876 65338876 1 + G A UCEC 65338873 + 65338853 65338893 41 TCTTTTTAGCTCTGAATGCCCAGGCTGCCCTCTCCCAAGCT TCTTTTTAGCTCTGAATGCCCAGACTGCCCTCTCCCAAGCT < 41bp 0.753000923391945 0.50874005416475 0.6418757 0.37539297 prediction 0.488521738454391 Functional Loss - SSSCA1 ENSG00000173465 CDS Human protein_coding chr11:65338873 chr11:65338876 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_67371 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:65338847-65338889
64251 chr16 85690909 85690909 1 + G A STAD 85690906 + 85690886 85690926 41 AGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAA AGCTGAAGGATGCCGGCCTGCAGACGCCCAAGCCCGTCCAA < 41bp 0.75873794633124 0.514479006901037 0.8611965 0.78083944 prediction 0.488517878860405 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85690906 chr16:85690909 nonsynonymous SNV 0.913 0 24 hm5C_associated_SNPs_67372 0 0 6 BUD13 POSTAR2 ENCODE chr16:85690869-85690960
64251 chr8 99961782 99961782 1 + C T COAD 99961780 + 99961760 99961800 41 CACACGGACGAGAGGCCGTACACGTGTGACATCTGCCACAA CACACGGACGAGAGGCCGTACATGTGTGACATCTGCCACAA < 41bp 0.798001288826954 0.553746852812316 0.15379226 0.10426593 prediction 0.488508872029277 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961780 chr8:99961782 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_67374 0 0 1 RBM15 POSTAR2 ENCODE chr8:99961727-99961784
64251 chr10 70987106 70987106 1 + G A SKCM 70987103 + 70987083 70987123 41 AAGATGTTGCCCACCTTCGTCAGGGCCATTCCCGATGGTTC AAGATGTTGCCCACCTTCGTCAGAGCCATTCCCGATGGTTC < 41bp 0.751437233635019 0.507194415854895 0.92795753 0.90076405 prediction 0.488485635560248 Functional Loss - HKDC1 ENSG00000156510 CDS Human protein_coding chr10:70987103 chr10:70987106 synonymous SNV . 0 24 hm5C_associated_SNPs_67377 0 0 1 PRPF8 POSTAR2 ENCODE chr10:70987096-70987162
64251 chr14 45605472 45605472 1 + G C BLCA 45605468 + 45605448 45605488 41 AATGGCGGGTTCTGCACCTCCGCGGGCGCCCTGTGGATTTA AATGGCGGGTTCTGCACCTCCGCGCGCGCCCTGTGGATTTA < 41bp 0.834546570630641 0.590314713864317 0.3763823 0.42236474 prediction 0.488463713532649 Functional Loss - FANCM ENSG00000187790 CDS Human protein_coding chr14:45605468 chr14:45605472 nonsynonymous SNV 0.396 4 25 hm5C_associated_SNPs_67381 0 0 1 RBM15 POSTAR2 ENCODE chr14:45605425-45605535
64251 chr11 44639739 44639739 1 + T C LUAD 44639738 + 44639718 44639758 41 TGCTGCGGCTGGGTCAGCTTCTACAACTGGACAGACAACGC TGCTGCGGCTGGGTCAGCTTCCACAACTGGACAGACAACGC < 41bp 0.791210648459593 0.54700224079755 0.90323746 0.32802802 prediction 0.488416815324087 Functional Loss - CD82 ENSG00000085117 CDS Human protein_coding chr11:44639738 chr11:44639739 nonsynonymous SNV 0.958 0 22 hm5C_associated_SNPs_67387 0 0 1 SND1 POSTAR2 ENCODE chr11:44639711-44639850
64251 chr16 68592375 68592375 1 + G T SARC 68592373 + 68592353 68592393 41 CTTGTGTATTTACCCATGAGCAGGATATCAAGTTTCCAAGC CTTGTGTATTTACCCATGAGCATGATATCAAGTTTCCAAGC < 41bp 0.744204039837867 0.447449659564362 0.85436416 0.0791823 prediction 0.488408079675735 Functional Loss - ZFP90 ENSG00000184939 splicing Human protein_coding chr16:68592373 chr16:68592375 . 1.000 0 23 hm5C_associated_SNPs_67390 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr16:68592363-68592421
64251 chr3 37284763 37284763 1 + G C rs2271549 37284759 + 37284739 37284779 41 CCGCGCAAGCGCCCTTGGCGCACAGTTCACCTGCTGCCGTT CCGCGCAAGCGCCCTTGGCGCACACTTCACCTGCTGCCGTT < 41bp 0.744200237559048 0.462984666823932 0.17234749 0.10136801 prediction 0.488400475118097 Functional Loss - GOLGA4 ENSG00000176354;ENSG00000270194 ncRNA_exonic Human other chr3:37284759 chr3:37284763 . . 0 25 hm5C_associated_SNPs_67392 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:37284760-37284780
64251 chr7 6631468 6631468 1 + G A UCEC 6631465 + 6631445 6631485 41 GCGGTGGCTGTGTGTCGAATCCCGGTGTTGGAGTGTGCTGC GCGGTGGCTGTGTGTCGAATCCCAGTGTTGGAGTGTGCTGC < 41bp 0.74419748045185 0.49621281308371 0.44880837 0.2634058 prediction 0.488394960903701 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631465 chr7:6631468 synonymous SNV . 0 24 hm5C_associated_SNPs_67394 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr7:6631461-6631480
64251 chr15 96876792 96876792 1 + G A rs567596788 96876789 + 96876769 96876809 41 CGCTCTCTGCTTGTCTCTCACTGGGGGGGTTCCCCGCCGGG CGCTCTCTGCTTGTCTCTCACTGAGGGGGTTCCCCGCCGGG < 41bp 0.745060313326767 0.500865826290471 0.91033816 0.39139086 prediction 0.488388974072591 Functional Loss - NR2F2 ENSG00000185551 UTR5 Human protein_coding chr15:96876789 chr15:96876792 . . 0 24 hm5C_associated_SNPs_67395 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:96876781-96876804
64251 chr1 9784037 9784037 1 + G T UCEC 9784034 + 9784014 9784054 41 CTTCCCCACCCAGGGAGGCCCTGGATCGAGCCATTGAGGAG CTTCCCCACCCAGGGAGGCCCTGTATCGAGCCATTGAGGAG < 41bp 0.744176061853874 0.351544203252976 0.281658 0.06342462 prediction 0.488352123707748 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9784034 chr1:9784037 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_67402 0 0 5 BUD13 POSTAR2 ENCODE chr1:9784006-9784051
64251 chr10 115457341 115457341 1 + C T ESCA 115457339 + 115457319 115457359 41 GATGCTAAGCCAGACCGGTCCTCGTTTGTACCGTCCCTCTT GATGCTAAGCCAGACCGGTCCTTGTTTGTACCGTCCCTCTT < 41bp 0.744176026025645 0.471870166105556 0.1428968 0.032766223 prediction 0.488352052051289 Functional Loss - CASP7 ENSG00000165806 CDS Human protein_coding chr10:115457339 chr10:115457341 nonsynonymous SNV 0.056 0 23 hm5C_associated_SNPs_67403 0 0 2 GRWD1 POSTAR2 ENCODE chr10:115457290-115457379
64251 chr11 76823690 76823690 1 + C T PRAD 76823688 + 76823668 76823708 41 CCCGAAAAGCCCAACGCCTACGCGGGCATCTTCCACTTCCA CCCGAAAAGCCCAACGCCTACGTGGGCATCTTCCACTTCCA < 41bp 0.795865266723236 0.551690119080833 0.13557354 0.096839815 prediction 0.488350295284805 Functional Loss - CAPN5 ENSG00000149260 CDS Human protein_coding chr11:76823688 chr11:76823690 nonsynonymous SNV 0.599 3 23 hm5C_associated_SNPs_67404 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:76823683-76823714
64251 chr2 42508074 42508074 1 + G T UCEC 42508072 + 42508052 42508092 41 GTTGACAACTATGATGACATCAGAACGGAACTGCCTCCTGA GTTGACAACTATGATGACATCATAACGGAACTGCCTCCTGA < 41bp 0.744173442473869 0.413208640709687 0.1617055 0.048714787 prediction 0.488346884947738 Functional Loss - EML4 ENSG00000143924 CDS Human protein_coding chr2:42508072 chr2:42508074 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_67405 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:42508057-42508099
64251 chr17 40665946 40665946 1 + C T SKCM 40665944 + 40665924 40665964 41 GAGTACTGCCTGGGCTGCATCTCCAACACTGCCTCCTACTT GAGTACTGCCTGGGCTGCATCTTCAACACTGCCTCCTACTT < 41bp 0.84827929223343 0.604107111098693 0.9626059 0.33449 prediction 0.488344362269476 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40665944 chr17:40665946 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_67407 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:40665915-40665950
64251 chr10 22016839 22016839 1 + G C LUSC 22016838 + 22016818 22016858 41 TTGGCAGAGGAAGCTCACCCCGAGGAAGTCTCTCGCCACGG TTGGCAGAGGAAGCTCACCCCCAGGAAGTCTCTCGCCACGG < 41bp 0.840129811442002 0.595963001628454 0.8599999 0.13249117 prediction 0.488333619627096 Functional Loss - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22016838 chr10:22016839 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_67408 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:22016809-22016839
64251 chr1 150919402 150919402 1 + G A HNSC 150919399 + 150919379 150919419 41 GTGGATCTATCGAGGCTCTACACGGCTGGAGCCCATGTTCA GTGGATCTATCGAGGCTCTACACAGCTGGAGCCCATGTTCA < 41bp 0.745671295026634 0.501534641160708 0.14220262 0.088620126 prediction 0.488273307731852 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150919399 chr1:150919402 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_67420 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:150919370-150919408
64251 chr17 32955650 32955650 1 + C T BLCA 32955648 + 32955628 32955668 41 AGTGGCCAGTGGCATGTGACCTCGGAGCTGCTGACTGGGGC AGTGGCCAGTGGCATGTGACCTTGGAGCTGCTGACTGGGGC < 41bp 0.815695729947272 0.571565175790558 0.6015336 0.32402387 prediction 0.488261108313429 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32955648 chr17:32955650 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_67421 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:32955645-32955669
64251 chr19 56160660 56160660 1 + C T BLCA 56160658 + 56160638 56160678 41 CTTTTACAGTCTGAGCCCCTCTCGGAGAAACTTCGAGGGTG CTTTTACAGTCTGAGCCCCTCTTGGAGAAACTTCGAGGGTG < 41bp 0.744126810341929 0.481801872725137 0.39187387 0.29249159 prediction 0.488253620683858 Functional Loss - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56160658 chr19:56160660 nonsynonymous SNV 0.269 2 23 hm5C_associated_SNPs_67422 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56160646-56160672
64251 chr2 131128846 131128846 1 + A C rs4380289 131128842 + 131128822 131128862 41 ACTTCTCGCCATACCCCGCCCACCAGGAGGGGTCCTCAGGT ACTTCTCGCCATACCCCGCCCACCCGGAGGGGTCCTCAGGT < 41bp 0.744124649763296 0.31496639137069 0.12818953 0.08010641 prediction 0.488249299526592 Functional Loss - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131128842 chr2:131128846 synonymous SNV . 0 25 hm5C_associated_SNPs_67423 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr2:131128820-131128847
64251 chr17 40714711 40714711 1 + C T UCEC 40714709 + 40714689 40714729 41 TCCCTAGCCCCTCGCCTGGCCTCCATCCTGACCTCGGCGGC TCCCTAGCCCCTCGCCTGGCCTTCATCCTGACCTCGGCGGC < 41bp 0.799636493156221 0.555522378431201 0.9516988 0.087327 prediction 0.48822822945004 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40714709 chr17:40714711 nonsynonymous SNV 0.935 2 23 hm5C_associated_SNPs_67429 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr1 33240185 33240185 1 + G C rs8717 33240181 + 33240161 33240201 41 AACCAGGCCCTGGCAGCAACCTGGGAATGGCTGGAGGTGGG AACCAGGCCCTGGCAGCAACCTGGCAATGGCTGGAGGTGGG < 41bp 0.783111198223694 0.538999527689593 0.5699942 0.24223822 prediction 0.4882233410682 Functional Loss - KIAA1522 ENSG00000162522 UTR3 Human protein_coding chr1:33240181 chr1:33240185 . . 0 25 hm5C_associated_SNPs_67430 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:33240159-33240189
64251 chr4 160274740 160274740 1 + C T rs201405934 160274738 + 160274718 160274758 41 TCCCAGGATCAGGGGGATCGCGCGTCACTTGATGCTGCTGA TCCCAGGATCAGGGGGATCGCGTGTCACTTGATGCTGCTGA < 41bp 0.744103549089504 0.486468534168802 0.48776227 0.3522352 prediction 0.488207098179007 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160274738 chr4:160274740 nonsynonymous SNV 0.270 1 23 hm5C_associated_SNPs_67433 0 0 3 RBM15 POSTAR2 ENCODE chr4:160274706-160274793
64251 chr2 169312884 169312884 1 + G C rs529703750 169312883 + 169312863 169312903 41 GGCTCGGGGCCAGCCGGGCGCGCATCCCCGGGCGCCCTGCG GGCTCGGGGCCAGCCGGGCGCCCATCCCCGGGCGCCCTGCG < 41bp 0.745261344440401 0.501159321110195 0.62523407 0.3338532 prediction 0.488204046660412 Functional Loss - CERS6 ENSG00000172292 UTR5 Human protein_coding chr2:169312883 chr2:169312884 . . 0 22 hm5C_associated_SNPs_67434 0 0 7 FUS POSTAR2 GSE40653,GSM998875 chr2:169312880-169312900
64251 chr3 30713446 30713446 1 + G C LUAD 30713442 + 30713422 30713462 41 GGTGGGGAAAGGTCGCTTTGCTGAGGTCTATAAGGCCAAGC GGTGGGGAAAGGTCGCTTTGCTGACGTCTATAAGGCCAAGC < 41bp 0.74410056261303 0.450732789026862 0.8690568 0.45079643 prediction 0.48820112522606 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713442 chr3:30713446 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_67435 0 0 1 RBM15 POSTAR2 ENCODE chr3:30713397-30713446
64251 chrX 11129452 11129452 1 + A C rs772661172 11129451 + 11129431 11129471 41 ACGCCGGCGGTGACCGCAGCCACAGCGGTGACCGAGTGAGA ACGCCGGCGGTGACCGCAGCCCCAGCGGTGACCGAGTGAGA < 41bp 0.745791511723253 0.501691578069318 0.18021852 0.13928711 prediction 0.488199867307869 Functional Loss - HCCS ENSG00000004961 UTR5 Human protein_coding chrX:11129451 chrX:11129452 . . 0 22 hm5C_associated_SNPs_67436 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chrX:11129429-11129473
64251 chr12 124189157 124189157 1 + T C UCEC 124189156 + 124189136 124189176 41 GCCTGGATATTCCTGCTCACCTGAGCATCCGCATCCTCATC GCCTGGATATTCCTGCTCACCCGAGCATCCGCATCCTCATC < 41bp 0.749871773847999 0.505777546672464 0.056054115 0.20702708 prediction 0.48818845435107 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124189156 chr12:124189157 nonsynonymous SNV 0.013 4 22 hm5C_associated_SNPs_67441 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:124189143-124189198
64251 chr17 73267534 73267534 1 + A C rs3809715 73267530 + 73267510 73267550 41 CGGGCCCACGCCGGACCCGCCGGCACCTCGATCTTGCGCGT CGGGCCCACGCCGGACCCGCCGGCCCCTCGATCTTGCGCGT < 41bp 0.902485071570869 0.658394101525526 0.5557776 0.33948648 prediction 0.488181940090685 Functional Loss - LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73267530 chr17:73267534 . . 0 25 hm5C_associated_SNPs_67443 0 0 1 DDX3X POSTAR2 ENCODE chr17:73267477-73267555
64251 chr17 1631475 1631475 1 + C T UCEC 1631473 + 1631453 1631493 41 ACACGTCTGGCGTCAGCTTCCACGACCAGGCTGACCTCCCT ACACGTCTGGCGTCAGCTTCCATGACCAGGCTGACCTCCCT < 41bp 0.77039251621927 0.526310268241335 0.15711969 0.27138355 prediction 0.48816449595587 Functional Loss - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1631473 chr17:1631475 synonymous SNV . 0 23 hm5C_associated_SNPs_67447 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:1631449-1631485
64251 chr2 238881826 238881826 1 + C T LUSC 238881824 + 238881804 238881844 41 ACGGCAGCCACAGCGTCCGACTCGACTCGGAGGGTTTCTGT ACGGCAGCCACAGCGTCCGACTTGACTCGGAGGGTTTCTGT < 41bp 0.74407397562555 0.474620645197474 0.1408419 0.065773696 prediction 0.4881479512511 Functional Loss - UBE2F ENSG00000184182;ENSG00000258984 CDS Human other chr2:238881824 chr2:238881826 nonsynonymous SNV 0.656 1 23 hm5C_associated_SNPs_67450 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:238881816-238881867
64251 chrX 64960400 64960400 1 + A C rs184459095 64960399 + 64960379 64960419 41 TTAGGGACTCAATTTCTCCCCAGGGTGGATGGGGGAAATGG TTAGGGACTCAATTTCTCCCCCGGGTGGATGGGGGAAATGG < 41bp 0.798658933606736 0.554595180321072 0.19713196 0.051169425 prediction 0.488127506571328 Functional Loss - MSN ENSG00000147065 UTR3 Human protein_coding chrX:64960399 chrX:64960400 . . 0 22 hm5C_associated_SNPs_67458 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:64960375-64960417
64251 chr19 9271074 9271074 1 + G A OV 9271071 + 9271051 9271091 41 CACACCGGGGAGAAGCCTTACGAGTGCAGCGACTGCGGGAA CACACCGGGGAGAAGCCTTACGAATGCAGCGACTGCGGGAA < 41bp 0.75018416623425 0.506136001446478 0.37648624 0.25667053 prediction 0.488096329575546 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271071 chr19:9271074 synonymous SNV . 0 24 hm5C_associated_SNPs_67462 0 0 1 RBM15 POSTAR2 ENCODE chr19:9271074-9271118
64251 chr3 107492114 107492114 1 + A T LUAD 107492110 + 107492090 107492130 41 CGCAAGAAGGTCCGCACATCCTCAAGTGGCAAGGGAAGCAT CGCAAGAAGGTCCGCACATCCTCATGTGGCAAGGGAAGCAT < 41bp 0.744028345401453 0.401932598917822 0.35735714 0.14484304 prediction 0.488056690802905 Functional Loss - BBX ENSG00000114439 CDS Human protein_coding chr3:107492110 chr3:107492114 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_67468 0 0 3 GRWD1 POSTAR2 ENCODE chr3:107492022-107492122
64251 chr19 10745462 10745462 1 + G A HNSC 10745459 + 10745439 10745479 41 TCACTGCTACATGGAGTACTCCCGACTGCGTGGTGAGGCCG TCACTGCTACATGGAGTACTCCCAACTGCGTGGTGAGGCCG < 41bp 0.748854697059077 0.504841828846464 0.5108745 0.1746482 prediction 0.488025736425227 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10745459 chr19:10745462 nonsynonymous SNV 0.771 0 24 hm5C_associated_SNPs_67474 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10745440-10745483
64251 chr17 42254189 42254189 1 - C G rs75036136 42254193 - 42254173 42254213 41 ACATGTTGCTCCAGGCCGCGCGCCGCCGCCACGTGCAGGGG ACATGTTGCTCCAGGCCGCGCGCCCCCGCCACGTGCAGGGG < 41bp 0.744011825900721 0.455665827667357 0.04531598 0.04665366 prediction 0.488023651801443 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254193 chr17:42254189 nonsynonymous SNV 0.226 1 25 hm5C_associated_SNPs_67475 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:42254161-42254210
64251 chr2 242509637 242509637 1 + C T LUSC 242509635 + 242509615 242509655 41 AGCCTGCCATGGTCCACGCCCTCGTGGACTGCCTGGGGGAG AGCCTGCCATGGTCCACGCCCTTGTGGACTGCCTGGGGGAG < 41bp 0.744011128325783 0.482158362095424 0.232068 0.2323156 prediction 0.488022256651566 Functional Loss - BOK ENSG00000176720 CDS Human protein_coding chr2:242509635 chr2:242509637 synonymous SNV . 0 23 hm5C_associated_SNPs_67476 0 0 2 DDX3X POSTAR2 ENCODE chr2:242509637-242509655
64251 chr10 75510968 75510968 1 + A C LUAD 75510967 + 75510947 75510987 41 AGTTTGGCCAAGGAGATGTACAGAATGGGCCAAGCTCCACT AGTTTGGCCAAGGAGATGTACCGAATGGGCCAAGCTCCACT < 41bp 0.747918625534064 0.50390840820956 0.2790568 0.098246545 prediction 0.488020434649008 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75510967 chr10:75510968 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_67477 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75510950-75510970
64251 chr15 67479712 67479712 1 + T C COAD 67479711 + 67479691 67479731 41 TGTTTTTGGCAGGATGCAACCTGAAGATCTTCAACAACCAG TGTTTTTGGCAGGATGCAACCCGAAGATCTTCAACAACCAG < 41bp 0.762902503855422 0.518899021817041 0.17056343 0.1842834 prediction 0.488006964076762 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67479711 chr15:67479712 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_67480 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:67479707-67479745
64251 chr8 92401613 92401613 1 + G T LUSC 92401610 + 92401590 92401630 41 ATGAGAAGTGTTATTTAATCCTGGATTGCAGTGGATTTACC ATGAGAAGTGTTATTTAATCCTGTATTGCAGTGGATTTACC < 41bp 0.744000730476525 0.381580382429682 0.31335202 0.31344903 prediction 0.488001460953051 Functional Loss - SLC26A7 ENSG00000147606 CDS Human protein_coding chr8:92401610 chr8:92401613 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_67483 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:92401613-92401647
64251 chr8 75276278 75276278 1 + C T LUSC 75276276 + 75276256 75276296 41 TCACCCTGGCAGACGTCTCACTCGCTGTCACATTGCATCGA TCACCCTGGCAGACGTCTCACTTGCTGTCACATTGCATCGA < 41bp 0.744000527834774 0.467698725761841 0.031926364 0.028115213 prediction 0.488001055669547 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75276276 chr8:75276278 synonymous SNV . 0 23 hm5C_associated_SNPs_67485 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:75276249-75276279
64251 chr1 15541718 15541718 1 + T C STAD 15541717 + 15541697 15541737 41 CGCGGCCGAGAAGCCAACAGCTCAGGGCAGCAACAAGACCG CGCGGCCGAGAAGCCAACAGCCCAGGGCAGCAACAAGACCG < 41bp 0.743992375797982 0.491830813417095 0.3639891 0.29260355 prediction 0.487984751595965 Functional Loss - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15541717 chr1:15541718 synonymous SNV . 0 22 hm5C_associated_SNPs_67486 0 0 2 DDX3X POSTAR2 ENCODE chr1:15541657-15541727
64251 chr15 90784918 90784918 1 + C T SKCM 90784916 + 90784896 90784936 41 TCCTGGCTTCCTCTTTTACACTCGTGGGCCAGGGCCTGACT TCCTGGCTTCCTCTTTTACACTTGTGGGCCAGGGCCTGACT < 41bp 0.784001349952866 0.540015323137652 0.17437121 0.1303727 prediction 0.487972053630427 Functional Loss - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90784916 chr15:90784918 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_67488 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:90784878-90784937
64251 chr16 847743 847743 1 + C T rs2294451 847741 + 847721 847761 41 GTCGTCAGGAGCACAGCAGTCCCGAGTGCAGGTGTGTGTGG GTCGTCAGGAGCACAGCAGTCCTGAGTGCAGGTGTGTGTGG < 41bp 0.763926648366223 0.519954836487957 0.29319292 0.26804295 prediction 0.487943623756531 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847741 chr16:847743 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_67492 0 0 4 BUD13 POSTAR2 ENCODE chr16:847715-847747
64251 chr1 19583636 19583636 1 + C T rs1126682 19583634 + 19583614 19583654 41 ATGAATACAAAGACAACCTGCACCAGGTAAGTCTCTGGCCC ATGAATACAAAGACAACCTGCATCAGGTAAGTCTCTGGCCC < 41bp 0.818052203069007 0.57408352832909 0.30068564 0.31438202 prediction 0.487937349479833 Functional Loss - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19583634 chr1:19583636 synonymous SNV . 0 23 hm5C_associated_SNPs_67493 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:19583588-19583637
64251 chr9 140147732 140147732 1 - C G rs570548330 140147733 - 140147713 140147753 41 GGGGAGGCCATGGTTCCACTCGGTGGCCGGGCCAAGCAGGT GGGGAGGCCATGGTTCCACTCCGTGGCCGGGCCAAGCAGGT < 41bp 0.743958190625907 0.438901509362236 0.8223549 0.35595477 prediction 0.487916381251815 Functional Loss - STPG3 ENSG00000197768 CDS Human protein_coding chr9:140147733 chr9:140147732 synonymous SNV . 0 22 hm5C_associated_SNPs_67497 0 0 3 AARS POSTAR2 ENCODE chr9:140147719-140147761
64251 chr11 85989563 85989563 1 + G C BLCA 85989562 + 85989542 85989582 41 TTTGGCGCTGGGATCGACTTCGATAAAATACTTTTGCCTAA TTTGGCGCTGGGATCGACTTCCATAAAATACTTTTGCCTAA < 41bp 0.743955724507102 0.481009451193296 0.1775944 0.23843592 prediction 0.487911449014204 Functional Loss - EED ENSG00000074266 CDS Human protein_coding chr11:85989562 chr11:85989563 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_67499 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:85989502-85989566
64251 chr15 50489802 50489802 1 + T C LUSC 50489801 + 50489781 50489821 41 CAGATGGGATTGACTCTTTCCTGGACAAAGTGGATGAAGTA CAGATGGGATTGACTCTTTCCCGGACAAAGTGGATGAAGTA < 41bp 0.749041738382646 0.505091773591573 0.2331489 0.33544827 prediction 0.487899929582147 Functional Loss - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50489801 chr15:50489802 nonsynonymous SNV 0.831 0 22 hm5C_associated_SNPs_67502 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:50489801-50489823
64251 chrX 70321173 70321173 1 + G A UCEC 70321170 + 70321150 70321190 41 AAGGGTGCTTCTCCAGCTCCCAGGCTCTGGAGGCCCTGCTC AAGGGTGCTTCTCCAGCTCCCAGACTCTGGAGGCCCTGCTC < 41bp 0.764366823418529 0.520418770862123 0.80300474 0.30649996 prediction 0.487896105112813 Functional Loss - FOXO4 ENSG00000184481 CDS Human protein_coding chrX:70321170 chrX:70321173 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_67505 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:70321156-70321190
64251 chr16 332493 332493 1 + C T rs199970245 332491 + 332471 332511 41 ACAGGGAGATTGTCAGCGGCCTCAAGTGTCTGCACCACACC ACAGGGAGATTGTCAGCGGCCTTAAGTGTCTGCACCACACC < 41bp 0.749431851040458 0.505487167680065 0.47905716 0.41896543 prediction 0.487889366720785 Functional Loss - ARHGDIG ENSG00000242173 CDS Human protein_coding chr16:332491 chr16:332493 synonymous SNV . 0 23 hm5C_associated_SNPs_67506 0 0 1 DDX24 POSTAR2 ENCODE chr16:332467-332505
64251 chr10 1149646 1149646 1 + C T BLCA 1149644 + 1149624 1149664 41 TCCGCGTCCCACTGACATCCCTCAAGAGCCACCAGGGCGTG TCCGCGTCCCACTGACATCCCTTAAGAGCCACCAGGGCGTG < 41bp 0.743943932200832 0.461158258379119 0.08844498 0.02211672 prediction 0.487887864401664 Functional Loss - WDR37 ENSG00000047056 CDS Human protein_coding chr10:1149644 chr10:1149646 synonymous SNV . 0 23 hm5C_associated_SNPs_67507 0 0 1 GRWD1 POSTAR2 ENCODE chr10:1149638-1149716
64251 chrX 151870067 151870067 1 + G A LUSC 151870064 + 151870044 151870084 41 TGCTCACCCAATATTTCGTGCAGGAAAACTACCTGGAGTAC TGCTCACCCAATATTTCGTGCAGAAAAACTACCTGGAGTAC < 41bp 0.753953703844346 0.51001094736189 0.78891885 0.21079245 prediction 0.487885512964912 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870064 chrX:151870067 nonsynonymous SNV 0.029 2 24 hm5C_associated_SNPs_67508 0 0 3 RBM15 POSTAR2 ENCODE chrX:151870056-151870083
64251 chr8 146278499 146278499 1 + G A LUSC 146278496 + 146278476 146278516 41 GGTGTGTGGAGCAACTGGAGCTGGGCCTCAAGAGGCAGAAA GGTGTGTGGAGCAACTGGAGCTGAGCCTCAAGAGGCAGAAA < 41bp 0.743940729888077 0.49946966861677 0.4162934 0.32796925 prediction 0.487881459776154 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278496 chr8:146278499 nonsynonymous SNV 0.905 2 24 hm5C_associated_SNPs_67509 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:146278466-146278504
64251 chr2 99156090 99156090 1 + A T SKCM 99156086 + 99156066 99156106 41 TGGCAGAGAGCGTGCTCTCCCTGCACGTGCCCCGGCAGTTC TGGCAGAGAGCGTGCTCTCCCTGCTCGTGCCCCGGCAGTTC < 41bp 0.884159000278226 0.640232374627049 0.6594157 0.20248258 prediction 0.487853251302355 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99156086 chr2:99156090 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_67512 0 0 3 DDX24 POSTAR2 ENCODE chr2:99156028-99156121
64251 chr9 130438929 130438929 1 + C T STAD 130438927 + 130438907 130438947 41 TGTCTTGTGCCCTCAGGCATCACGGAGGAAAACCTGAACAA TGTCTTGTGCCCTCAGGCATCATGGAGGAAAACCTGAACAA < 41bp 0.806189013556542 0.562273640465977 0.6548091 0.4290108 prediction 0.48783074618113 Functional Loss - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130438927 chr9:130438929 nonsynonymous SNV 0.973 4 23 hm5C_associated_SNPs_67516 1 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:130438923-130438957
64251 chr10 7773949 7773949 1 + C T COAD 7773947 + 7773927 7773967 41 GATCAAATAGAGAGCGTTATCACGGCGACTTCGGTACTTCC GATCAAATAGAGAGCGTTATCATGGCGACTTCGGTACTTCC < 41bp 0.793514104106994 0.549602834926448 0.93684566 0.91296685 prediction 0.487822538361092 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7773947 chr10:7773949 nonsynonymous SNV 0.116 2 23 hm5C_associated_SNPs_67517 0 0 2 SND1 POSTAR2 ENCODE chr10:7773946-7773959
64251 chr7 108212208 108212208 1 + G T LUSC 108212206 + 108212186 108212226 41 TCAATTTTCATCTTTGCAATCTGCATTTTAATGATAACAGA TCAATTTTCATCTTTGCAATCTTCATTTTAATGATAACAGA < 41bp 0.743908340547461 0.434472395929587 0.1622577 0.24654096 prediction 0.487816681094922 Functional Loss - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108212206 chr7:108212208 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_67520 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:108212183-108212213
64251 chr10 54074811 54074811 1 + C T COAD 54074809 + 54074789 54074829 41 GCCGAAAACGCTGCATGCGTCACGCTATGTGCTGCCCCGGG GCCGAAAACGCTGCATGCGTCATGCTATGTGCTGCCCCGGG < 41bp 0.743899916879791 0.484266160472074 0.2656945 0.33855912 prediction 0.487799833759582 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074809 chr10:54074811 synonymous SNV . 0 23 hm5C_associated_SNPs_67524 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074800-54074820
64251 chr22 50615643 50615643 1 + G A HNSC 50615640 + 50615620 50615660 41 AGATCGACAACTGTTACCACCGGGCGGCCGAGGGCCGCGCG AGATCGACAACTGTTACCACCGGACGGCCGAGGGCCGCGCG < 41bp 0.743883927566143 0.498147490373619 0.9185255 0.81389654 prediction 0.487767855132286 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615640 chr22:50615643 nonsynonymous SNV 0.417 4 24 hm5C_associated_SNPs_67531 0 0 1 YBX3 POSTAR2 ENCODE chr22:50615607-50615662
64251 chrX 37553608 37553608 1 + G T UCEC 37553605 + 37553585 37553625 41 GAGCCTTATGTCAGTATCACCAAGAAGAGGCAAATGCCAAA GAGCCTTATGTCAGTATCACCAATAAGAGGCAAATGCCAAA < 41bp 0.743882424886983 0.364337241520782 0.60810065 0.103414565 prediction 0.487764849773965 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37553605 chrX:37553608 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_67534 0 0 1 IGF2BP1 POSTAR2 ENCODE chrX:37553538-37553616
64251 chr11 2424340 2424340 1 + C T UCEC 2424338 + 2424318 2424358 41 TCCCCGACTACGTGGCACACCCCGAGCGCTGGACCAAGTAC TCCCCGACTACGTGGCACACCCTGAGCGCTGGACCAAGTAC < 41bp 0.780763767142466 0.536885843394982 0.01321277 0.0069417953 prediction 0.487755847494968 Functional Loss - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424338 chr11:2424340 synonymous SNV . 0 23 hm5C_associated_SNPs_67536 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:2424323-2424354
64251 chr17 12883400 12883400 1 + C T SKCM 12883398 + 12883378 12883418 41 AACAAAAAGCAAGGAACTTTCTCCAGGCTCTGCACAGAAAG AACAAAAAGCAAGGAACTTTCTTCAGGCTCTGCACAGAAAG < 41bp 0.743876180523225 0.447957402843608 0.9395899 0.09064701 prediction 0.48775236104645 Functional Loss - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12883398 chr17:12883400 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_67537 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:12883391-12883414
64251 chr2 220371144 220371144 1 + G T LUAD 220371141 + 220371121 220371161 41 TGCTGCCTGCTATCACCATCCTGGGTATGGCTTCCTGGGGG TGCTGCCTGCTATCACCATCCTGTGTATGGCTTCCTGGGGG < 41bp 0.918006021082272 0.67413426985006 0.72189033 0.12039116 prediction 0.487743502464424 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220371141 chr2:220371144 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_67538 0 0 5 GRWD1 POSTAR2 ENCODE chr2:220371104-220371144
64251 chr2 113322044 113322044 1 + C T PAAD 113322042 + 113322022 113322062 41 CTGGGTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCTC CTGGGTGGATAAGGATCTTGCTTCAGGCATCGCAGATTCTC < 41bp 0.841218798643026 0.597351757419473 0.8534551 0.15514904 prediction 0.487734082447106 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113322042 chr2:113322044 nonsynonymous SNV 0.113 1 23 hm5C_associated_SNPs_67543 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr2:113322005-113322068
64251 chr19 13885348 13885348 1 + A C rs80019370 13885347 + 13885327 13885367 41 ACCCGCAAAGAGTAAGACGGCAGCGGCAGCCTCTGAAAAGA ACCCGCAAAGAGTAAGACGGCCGCGGCAGCCTCTGAAAAGA < 41bp 0.781861253631971 0.538000835299025 0.65763664 0.36551315 prediction 0.487720836665893 Functional Loss - C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13885347 chr19:13885348 nonsynonymous SNV 0.032 0 22 hm5C_associated_SNPs_67545 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr19:13885338-13885366
64251 chr17 41006617 41006617 1 + C T SKCM 41006615 + 41006595 41006635 41 CCTCGTGGGAAGCGCCACCCCTCGCTACCTGTACCTGGCCA CCTCGTGGGAAGCGCCACCCCTTGCTACCTGTACCTGGCCA < 41bp 0.814295323418526 0.570442923132193 0.28726688 0.01637873 prediction 0.487704800572665 Functional Loss - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006615 chr17:41006617 nonsynonymous SNV 0.021 3 23 hm5C_associated_SNPs_67547 0 0 1 PPIG POSTAR2 ENCODE chr17:41006505-41006620
64251 chr1 68152173 68152173 1 + G A SARC 68152170 + 68152150 68152190 41 CATCCTGCGCGTCAGCAACCCGGGCCGGCTGGCGGAGCTCC CATCCTGCGCGTCAGCAACCCGGACCGGCTGGCGGAGCTCC < 41bp 0.748427594108576 0.504590050776645 0.61811507 0.16443211 prediction 0.487675086663862 Functional Loss - GADD45A ENSG00000116717 CDS Human protein_coding chr1:68152170 chr1:68152173 nonsynonymous SNV 0.972 1 24 hm5C_associated_SNPs_67551 0 0 1 GRWD1 POSTAR2 ENCODE chr1:68152096-68152213
64251 chr19 34685433 34685433 1 + C T UCEC 34685431 + 34685411 34685451 41 GACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAAT GACAGATCGTCCAATACCACCTTGAGATGAAGTCTTTGAAT < 41bp 0.743835226856245 0.467844737761078 0.64670825 0.105870456 prediction 0.487670453712489 Functional Loss - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34685431 chr19:34685433 stopgain 1.000 1 23 hm5C_associated_SNPs_67553 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34685380-34685520
64251 chr14 99959163 99959163 1 + G C CESC 99959162 + 99959142 99959182 41 CAGCCACCGAGGCCCGGTACCGCCGAGAGGGCGCTCGGTTC CAGCCACCGAGGCCCGGTACCCCCGAGAGGGCGCTCGGTTC < 41bp 0.862856077706336 0.61903120489636 0.33272374 0.07698274 prediction 0.487649745619953 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99959162 chr14:99959163 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_67555 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:99959161-99959199
64251 chr19 13875456 13875456 1 + G T LUSC 13875454 + 13875434 13875474 41 GCTCCCTGCAGATCCTAGACCAGCTGCTGCTGCCCAAGCAG GCTCCCTGCAGATCCTAGACCATCTGCTGCTGCCCAAGCAG < 41bp 0.743824402415782 0.39295806367025 0.938684 0.2548123 prediction 0.487648804831564 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13875454 chr19:13875456 nonsynonymous SNV 0.916 4 23 hm5C_associated_SNPs_67556 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:13875430-13875468
64251 chrX 70787860 70787860 1 + C T CESC 70787858 + 70787838 70787878 41 TACAGGAGAGACTCTTGCTTCTCGAGTTGCAGCATCCCAGC TACAGGAGAGACTCTTGCTTCTTGAGTTGCAGCATCCCAGC < 41bp 0.842472088920661 0.598656858254196 0.42044607 0.042794734 prediction 0.487630461332931 Functional Loss - OGT ENSG00000147162 CDS Human protein_coding chrX:70787858 chrX:70787860 stopgain 1.000 1 23 hm5C_associated_SNPs_67559 0 0 27 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:70787820-70787880
64251 chrX 100667953 100667953 1 + G T LGG 100667951 + 100667931 100667971 41 ATTGAAATTGGACCCGATGGCAGAGTTACCGGTGAGGCAGA ATTGAAATTGGACCCGATGGCATAGTTACCGGTGAGGCAGA < 41bp 0.874804015568867 0.630990533577356 0.7682117 0.20090583 prediction 0.487626963983022 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667951 chrX:100667953 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_67560 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:100667904-100667958
64251 chr12 108086637 108086637 1 + G T LUAD 108086634 + 108086614 108086654 41 CTCTTGGGTCTTACGGTCTACGGGAGTAATGATCAAGATCC CTCTTGGGTCTTACGGTCTACGGTAGTAATGATCAAGATCC < 41bp 0.914281028415952 0.670472886026662 0.7467532 0.18208542 prediction 0.48761628477858 Functional Loss - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108086634 chr12:108086637 synonymous SNV . 0 24 hm5C_associated_SNPs_67564 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:108086600-108086640
64251 chr12 56549214 56549214 1 + C T STAD 56549212 + 56549192 56549232 41 CCAACCTCCAGAGCTGAAGTCGCGGCGTGTGGACTTTGAGA CCAACCTCCAGAGCTGAAGTCGTGGCGTGTGGACTTTGAGA < 41bp 0.743799600940734 0.489986046648344 0.9289354 0.8998106 prediction 0.487599201881468 Functional Loss - MYL6B ENSG00000196465 CDS Human protein_coding chr12:56549212 chr12:56549214 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_67569 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:56549207-56549226
64251 chr7 6631414 6631414 1 + G T rs10260097 6631411 + 6631391 6631431 41 GGGAACAAAGCCGATGACAGCCGGATGAGCTTGTTGGGAAA GGGAACAAAGCCGATGACAGCCGTATGAGCTTGTTGGGAAA < 41bp 0.743799140960698 0.35154953336955 0.48261514 0.256718 prediction 0.487598281921396 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6631411 chr7:6631414 synonymous SNV . 0 24 hm5C_associated_SNPs_67570 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:6631375-6631421
64251 chr16 1556998 1556998 1 + C T BLCA 1556996 + 1556976 1557016 41 TGGGAGAAGACCAGCTGGTTCTCGGAAGGCTGGCGCACACC TGGGAGAAGACCAGCTGGTTCTTGGAAGGCTGGCGCACACC < 41bp 0.743794018102306 0.473484632283052 0.9064871 0.8194271 prediction 0.487588036204613 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1556996 chr16:1556998 synonymous SNV . 0 23 hm5C_associated_SNPs_67575 0 0 1 BUD13 POSTAR2 ENCODE chr16:1556935-1557006
64251 chr17 73124937 73124937 1 + C T SKCM 73124935 + 73124915 73124955 41 CCGCCGGGCCGCAGCTTTCTCCCAGAGCTGACCGCCACGCC CCGCCGGGCCGCAGCTTTCTCCTAGAGCTGACCGCCACGCC < 41bp 0.746951412326556 0.503169495196666 0.7050433 0.3669386 prediction 0.487563834259779 Functional Loss - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73124935 chr17:73124937 nonsynonymous SNV 0.013 0 23 hm5C_associated_SNPs_67579 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:73124917-73124950
64251 chr3 16327891 16327891 1 + C T SKCM 16327889 + 16327869 16327909 41 GTGTGGAGCTGCCAGTGAGTCACCGTCAGTGAAGAGCCTCC GTGTGGAGCTGCCAGTGAGTCATCGTCAGTGAAGAGCCTCC < 41bp 0.743777561241851 0.460320915947083 0.10067579 0.18038332 prediction 0.487555122483702 Functional Loss - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16327889 chr3:16327891 nonsynonymous SNV 0.017 1 23 hm5C_associated_SNPs_67580 0 0 2 PPIG POSTAR2 ENCODE chr3:16327842-16327954
64251 chr2 182322980 182322980 1 + C T ESCA 182322978 + 182322958 182322998 41 CCAACGCTTCAGTGATCAATCCCGGGGCGATTTACAGATGC CCAACGCTTCAGTGATCAATCCTGGGGCGATTTACAGATGC < 41bp 0.799849826294792 0.556084590289575 0.93799436 0.935254 prediction 0.487530472010434 Functional Loss - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182322978 chr2:182322980 synonymous SNV . 0 23 hm5C_associated_SNPs_67585 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:182322974-182323001
64251 chr17 1657748 1657748 1 + G A rs144890920 1657745 + 1657725 1657765 41 AGAGCCTGAAAGGCTTCCCCCGCGGAGACAAGCTTTTCGGC AGAGCCTGAAAGGCTTCCCCCGCAGAGACAAGCTTTTCGGC < 41bp 0.759463638477551 0.515712444023158 0.78255624 0.22888604 prediction 0.487502388908785 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657745 chr17:1657748 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_67588 0 0 2 SND1 POSTAR2 ENCODE chr17:1657714-1657755
64251 chr8 48626154 48626154 1 + C T UCEC 48626152 + 48626132 48626172 41 AGCTGCCTGGCCCGGTGATGCTCGACAGCCTGGACTCTGCA AGCTGCCTGGCCCGGTGATGCTTGACAGCCTGGACTCTGCA < 41bp 0.783893624249304 0.540151515966494 0.6817477 0.22871143 prediction 0.48748421656562 Functional Loss - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48626152 chr8:48626154 synonymous SNV . 0 23 hm5C_associated_SNPs_67590 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:48626127-48626181
64251 chr6 33382864 33382864 1 + C T LUAD 33382862 + 33382842 33382882 41 TGGGGCCACCCTCAGCAGTGCGCAATCAGCCCGAGCCCCAG TGGGGCCACCCTCAGCAGTGCGTAATCAGCCCGAGCCCCAG < 41bp 0.743731341981938 0.490973107727391 0.058014303 0.062734574 prediction 0.487462683963876 Functional Loss - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33382862 chr6:33382864 stopgain 0.999 0 23 hm5C_associated_SNPs_67594 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:33382815-33382867
64251 chr1 233515261 233515261 1 + G A SKCM 233515258 + 233515238 233515278 41 GTGACTCTGAGATGCTCACTCCGGATTTTTGTCCCACTGCC GTGACTCTGAGATGCTCACTCCGAATTTTTGTCCCACTGCC < 41bp 0.751605537620513 0.507880661803629 0.8663949 0.22636428 prediction 0.487449751633767 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233515258 chr1:233515261 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_67595 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr1:233515223-233515271
64251 chr17 19232099 19232099 1 + C T rs148952227 19232097 + 19232077 19232117 41 GTACAATCTGTCCCCAAGAACTCGGACCCCTGGGCAGCTTC GTACAATCTGTCCCCAAGAACTTGGACCCCTGGGCAGCTTC < 41bp 0.812047858798573 0.568325446522825 0.20195386 0.12094292 prediction 0.487444824551495 Functional Loss - EPN2 ENSG00000072134 CDS Human protein_coding chr17:19232097 chr17:19232099 nonsynonymous SNV 0.227 1 23 hm5C_associated_SNPs_67596 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:19232094-19232117
64251 chr17 42266848 42266848 1 + C T HNSC 42266846 + 42266826 42266866 41 CCCCTGAGATCTGAGGATAGCACCTGCCTCCCTCCCAGCCC CCCCTGAGATCTGAGGATAGCATCTGCCTCCCTCCCAGCCC < 41bp 0.74372181908168 0.499685402151613 0.04617545 0.07159549 prediction 0.48744363816336 Functional Loss - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266846 chr17:42266848 nonsynonymous SNV 0.737 0 23 hm5C_associated_SNPs_67597 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:42266841-42266878
64251 chr8 23150856 23150856 1 + G A COAD 23150853 + 23150833 23150873 41 TTCAGTGGGTGGATGATACTCACGCACTCGGCATCTTTCCC TTCAGTGGGTGGATGATACTCACACACTCGGCATCTTTCCC < 41bp 0.743705638476033 0.498351096159008 0.05413875 0.038111 prediction 0.487411276952065 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23150853 chr8:23150856 nonsynonymous SNV 0.363 4 24 hm5C_associated_SNPs_67601 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr8:23150844-23150864
64251 chr20 61598731 61598731 1 + C T rs7271712 61598729 + 61598709 61598749 41 GGCGGCTACTTGATGGAGACCACGGGCTCCTGGACTTGCCT GGCGGCTACTTGATGGAGACCATGGGCTCCTGGACTTGCCT < 41bp 0.743686957142485 0.492908964138148 0.41569132 0.30775446 prediction 0.487373914284971 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598729 chr20:61598731 nonsynonymous SNV 0.857 2 23 hm5C_associated_SNPs_67608 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:61598717-61598746
64251 chr9 35658795 35658795 1 + C T rs553528072 35658793 + 35658773 35658813 41 GGGCGTGGGGATCCCCTGAGCCCGAATCTCCCATGGGGGTG GGGCGTGGGGATCCCCTGAGCCTGAATCTCCCATGGGGGTG < 41bp 0.75240951086583 0.508736296472562 0.34474814 0.2817732 prediction 0.487346428786535 Functional Loss - CCDC107 ENSG00000159884 intronic Human protein_coding chr9:35658793 chr9:35658795 . . 0 23 hm5C_associated_SNPs_67610 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35658720-35658819
64251 chr7 154738395 154738395 1 - C A UCEC 154738397 - 154738377 154738417 41 GGAAGCTCATGGAGCACAAGCAGAACTCGGTGGGTAGAGTG GGAAGCTCATGGAGCACAAGCATAACTCGGTGGGTAGAGTG < 41bp 0.743667907604998 0.40033719893335 0.4322676 0.25367063 prediction 0.487335815209996 Functional Loss - PAXIP1 ENSG00000157212 CDS Human protein_coding chr7:154738397 chr7:154738395 nonsynonymous SNV 0.932 3 23 hm5C_associated_SNPs_67614 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:154738380-154738400
64251 chr2 64112782 64112782 1 + G T UCEC 64112779 + 64112759 64112799 41 AGCAAAGGACGTGTCTTACTCAGGGGAAAATACAGAAGCTT AGCAAAGGACGTGTCTTACTCAGTGGAAAATACAGAAGCTT < 41bp 0.917550484888283 0.673890794545688 0.94557106 0.8761141 prediction 0.487319380685191 Functional Loss - UGP2 ENSG00000169764 CDS Human protein_coding chr2:64112779 chr2:64112782 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_67616 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:64112761-64112782
64251 chr1 41236482 41236482 1 + C T SKCM 41236480 + 41236460 41236500 41 AGCCCTCCGACGGGCAGGCCCCCCAGGTGACCGGCGACTGA AGCCCTCCGACGGGCAGGCCCCTCAGGTGACCGGCGACTGA < 41bp 0.794783263199052 0.551125109240871 0.29259047 0.30126035 prediction 0.487316307916363 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41236480 chr1:41236482 synonymous SNV 0.998 1 23 hm5C_associated_SNPs_67617 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41236480-41236500
64251 chr17 37818594 37818594 1 + C T SKCM 37818592 + 37818572 37818612 41 TCTGGATTCTTAATACAGATCTCAAGGTGGGGTGCTGGGGG TCTGGATTCTTAATACAGATCTTAAGGTGGGGTGCTGGGGG < 41bp 0.743651475439097 0.464899583847906 0.16926071 0.1880733 prediction 0.487302950878193 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37818592 chr17:37818594 synonymous SNV . 0 23 hm5C_associated_SNPs_67621 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:37818562-37818595
64251 chr11 8704798 8704798 1 + G C LAML 8704794 + 8704774 8704814 41 AACTTAGGGGCCACGTGAGCCACGGCCACGGCCGCATAGGT AACTTAGGGGCCACGTGAGCCACGCCCACGGCCGCATAGGT < 41bp 0.743647356290126 0.455340993956325 0.75375485 0.1692352 prediction 0.487294712580252 Functional Loss - RPL27A ENSG00000166441 CDS Human protein_coding chr11:8704794 chr11:8704798 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_67624 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:8704742-8704799
64251 chr6 116720798 116720798 1 + T C OV 116720797 + 116720777 116720817 41 GCCCGAGACATGGCCAAAGACTACATGGAGAGGATGGCAGC GCCCGAGACATGGCCAAAGACCACATGGAGAGGATGGCAGC < 41bp 0.743634819093063 0.479845938808739 0.91091096 0.15104315 prediction 0.487269638186125 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116720797 chr6:116720798 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_67628 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:116720758-116720802
64251 chr17 27067543 27067543 1 + G T STAD 27067541 + 27067521 27067561 41 CCAGCAGGTGCCCATGCCCCCAGGACAGGAAGCTCAGCGAG CCAGCAGGTGCCCATGCCCCCATGACAGGAAGCTCAGCGAG < 41bp 0.899718069263027 0.656085408479557 0.91852486 0.24700385 prediction 0.487265321566939 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27067541 chr17:27067543 stopgain 0.999 1 23 hm5C_associated_SNPs_67630 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:27067524-27067606
64251 chr16 87723611 87723611 1 + G A rs183515054 87723608 + 87723588 87723628 41 GTGTCCGCAGCGGTGCCCTGCGCGGCGGCCTGCTCGTGGAT GTGTCCGCAGCGGTGCCCTGCGCAGCGGCCTGCTCGTGGAT < 41bp 0.771269811132392 0.527639129736424 0.8599256 0.19002399 prediction 0.487261362791936 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87723608 chr16:87723611 nonsynonymous SNV 0.215 0 24 hm5C_associated_SNPs_67631 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:87723602-87723623
64251 chr5 43616149 43616149 1 + C T HNSC 43616147 + 43616127 43616167 41 CAGGGATATGATGCGCTAAGCTCCATGGCCAACATTGCGGG CAGGGATATGATGCGCTAAGCTTCATGGCCAACATTGCGGG < 41bp 0.743626171846919 0.441225081947828 0.9445971 0.07199344 prediction 0.487252343693839 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43616147 chr5:43616149 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_67632 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:43616142-43616163
64251 chr1 109241810 109241810 1 + G C LUAD 109241809 + 109241789 109241829 41 CAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCA CAAGGAGATCTCTGAGTCCACCGAGGTCCCCAAGAAGGTCA < 41bp 0.860012703449471 0.616388287385515 0.8770307 0.78308415 prediction 0.487248832127912 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241809 chr1:109241810 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_67634 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:109241790-109241811
64251 chr15 40494810 40494810 1 + G A rs28989187 40494807 + 40494787 40494827 41 CAGTCCTCCTGCAGATCCCCCACGAGTTTTAGCTCAACGAA CAGTCCTCCTGCAGATCCCCCACAAGTTTTAGCTCAACGAA < 41bp 0.749999037613224 0.506387582489611 0.089173555 0.026078075 prediction 0.487222910247228 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40494807 chr15:40494810 nonsynonymous SNV 0.159 0 24 hm5C_associated_SNPs_67637 2 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr15:40494807-40494828
64251 chr1 95428631 95428631 1 + A C rs183910396 95428630 + 95428610 95428650 41 CGTTGAAAAGCCTTTGACCACAGTGCAGGGAGCAGAAGACA CGTTGAAAAGCCTTTGACCACCGTGCAGGGAGCAGAAGACA < 41bp 0.770184200998799 0.526575534937192 0.14729905 0.22164536 prediction 0.487217332123214 Functional Loss - LOC729970 ENSG00000235501 ncRNA_exonic Human antisense chr1:95428630 chr1:95428631 . . 0 22 hm5C_associated_SNPs_67638 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:95428616-95428656
64251 chr2 148684693 148684693 1 + C T STAD 148684691 + 148684671 148684711 41 CCATTGAAGAATGTTGGGATCACGACGCAGAAGCCAGGTTA CCATTGAAGAATGTTGGGATCATGACGCAGAAGCCAGGTTA < 41bp 0.808723749016125 0.565115859786391 0.2320753 0.33427817 prediction 0.487215778459467 Functional Loss - ACVR2A ENSG00000121989 CDS Human protein_coding chr2:148684691 chr2:148684693 synonymous SNV . 0 23 hm5C_associated_SNPs_67640 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334288 chr2:148684680-148684700
64251 chr11 61536758 61536758 1 + C T MESO 61536756 + 61536736 61536776 41 CTGCCGGACTCTCCCCCAGACTCGGGCTCCGAGGCCTACTC CTGCCGGACTCTCCCCCAGACTTGGGCTCCGAGGCCTACTC < 41bp 0.743604434050601 0.474899103335339 0.6119041 0.37114632 prediction 0.487208868101203 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61536756 chr11:61536758 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_67643 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61536732-61536794
64251 chr1 114456304 114456304 1 + G T rs2455871 114456302 + 114456282 114456322 41 TCCTAGCTCAGTGACTGCCACAGGATGGGTCTTTCAGATTT TCCTAGCTCAGTGACTGCCACATGATGGGTCTTTCAGATTT < 41bp 0.799332273942805 0.555730373610809 0.8590237 0.3713712 prediction 0.487203800663992 Functional Loss - DCLRE1B ENSG00000118655 UTR3 Human protein_coding chr1:114456302 chr1:114456304 . . 0 23 hm5C_associated_SNPs_67644 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:114456276-114456311
64251 chr16 88870976 88870976 1 + G A rs140663920 88870973 + 88870953 88870993 41 GTTTCCAGCCCCAGTACCCCCGAGGCCCCAGACATCCCAGC GTTTCCAGCCCCAGTACCCCCGAAGCCCCAGACATCCCAGC < 41bp 0.745374566492376 0.501780282224093 0.8349027 0.36357623 prediction 0.487188568536566 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88870973 chr16:88870976 synonymous SNV . 0 24 hm5C_associated_SNPs_67649 0 0 4 DROSHA POSTAR2 ENCODE chr16:88870930-88871005
64251 chr2 31484537 31484537 1 + C T COAD 31484535 + 31484515 31484555 41 ATGGCCGGATCGAGCGGGAGCACCAGATCTCACCTGGGGAC ATGGCCGGATCGAGCGGGAGCATCAGATCTCACCTGGGGAC < 41bp 0.743594059361335 0.458409160627801 0.8300997 0.5874644 prediction 0.48718811872267 Functional Loss - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31484535 chr2:31484537 synonymous SNV . 0 23 hm5C_associated_SNPs_67650 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:31484510-31484540
64251 chr2 118860815 118860815 1 + G C LUAD 118860811 + 118860791 118860831 41 ACCCCTGCATTGACAGACATCTAGGAGAACCACATAAATTT ACCCCTGCATTGACAGACATCTAGCAGAACCACATAAATTT < 41bp 0.743582685266143 0.469644668148501 0.3754632 0.14890671 prediction 0.487165370532287 Functional Loss - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118860811 chr2:118860815 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_67654 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:118860778-118860816
64251 chr2 118860814 118860814 1 + G T LUAD 118860811 + 118860791 118860831 41 ACCCCTGCATTGACAGACATCTAGGAGAACCACATAAATTT ACCCCTGCATTGACAGACATCTATGAGAACCACATAAATTT < 41bp 0.743582685266143 0.365799950869551 0.3754632 0.20483896 prediction 0.487165370532287 Functional Loss - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118860811 chr2:118860814 stopgain 1.000 1 24 hm5C_associated_SNPs_67655 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:118860778-118860816
64251 chr13 111926284 111926284 1 + C T UCEC 111926282 + 111926262 111926302 41 ACCCTACGCTGCTCAAAGAGCTCGAGAGACACATGGAGGTA ACCCTACGCTGCTCAAAGAGCTTGAGAGACACATGGAGGTA < 41bp 0.743578897514165 0.462549474463436 0.08937144 0.09840512 prediction 0.487157795028329 Functional Loss - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111926282 chr13:111926284 synonymous SNV . 0 23 hm5C_associated_SNPs_67656 0 0 4 BUD13 POSTAR2 ENCODE chr13:111926135-111926285
64251 chr4 110788886 110788886 1 + G T TGCT 110788883 + 110788863 110788903 41 TTGACCCTGCTATAGTGCTTCTGGATCCACTGATGACTTGC TTGACCCTGCTATAGTGCTTCTGTATCCACTGATGACTTGC < 41bp 0.743577156107503 0.361069424513679 0.37750295 0.11299643 prediction 0.487154312215007 Functional Loss - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110788883 chr4:110788886 nonsynonymous SNV 0.851 4 24 hm5C_associated_SNPs_67658 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr4:110788879-110788902
64251 chr3 184577792 184577792 1 + G T SARC 184577789 + 184577769 184577809 41 TCAGGTAAAGAGAGATGAATCTGGAGCAATACATGTTACTA TCAGGTAAAGAGAGATGAATCTGTAGCAATACATGTTACTA < 41bp 0.74357092876748 0.385201020395303 0.34748775 0.16929999 prediction 0.487141857534959 Functional Loss - VPS8 ENSG00000156931 CDS Human protein_coding chr3:184577789 chr3:184577792 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_67661 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184577778-184577799
64251 chr8 26510829 26510829 1 + C T SKCM 26510827 + 26510807 26510847 41 TGTGACGCCCAAGACAGTCACTCCAGCCTCCTCGGCCAAGA TGTGACGCCCAAGACAGTCACTTCAGCCTCCTCGGCCAAGA < 41bp 0.849096917251561 0.605539742476201 0.9463204 0.30131418 prediction 0.48711434955072 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26510827 chr8:26510829 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_67664 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:26510823-26510846
64251 chr22 38468531 38468531 1 + G T SARC 38468529 + 38468509 38468549 41 CGGGGTGCGGGAGCCCCAGCCAGCTGCGAGCGAGGCTTTTG CGGGGTGCGGGAGCCCCAGCCATCTGCGAGCGAGGCTTTTG < 41bp 0.743543784795018 0.385324749137355 0.89335585 0.7319962 prediction 0.487087569590037 Functional Loss - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38468529 chr22:38468531 nonsynonymous SNV 0.279 1 23 hm5C_associated_SNPs_67670 0 0 2 DDX24 POSTAR2 ENCODE chr22:38468483-38468601
64251 chr20 62891601 62891601 1 + A C SKCM 62891600 + 62891580 62891620 41 GGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCAT GGCAGTGGCACTGGGTATCTCCGCTCCATGGTGGGCCTCAT < 41bp 0.743539122423654 0.484709327510892 0.390093 0.38198632 prediction 0.487078244847309 Functional Loss - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62891600 chr20:62891601 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_67673 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:62891558-62891615
64251 chr7 6624761 6624761 1 + C T UCEC 6624759 + 6624739 6624779 41 TACGTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCAT TACGTCTTGACCTTGACGGCCTTGGCTGCCACCGTCGCCAT < 41bp 0.743534433868432 0.463650413756443 0.15689486 0.18718302 prediction 0.487068867736863 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6624759 chr7:6624761 nonsynonymous SNV 0.171 2 23 hm5C_associated_SNPs_67674 0 0 3 GRWD1 POSTAR2 ENCODE chr7:6624684-6624829
64251 chr12 1893206 1893206 1 + C T rs185048932 1893204 + 1893184 1893224 41 CCCTGTATGCTGCCCGGATCCCCGAACGCTTTTTCCCTGGC CCCTGTATGCTGCCCGGATCCCTGAACGCTTTTTCCCTGGC < 41bp 0.841142746312208 0.597610320376654 0.26438642 0.09918782 prediction 0.487064851871108 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1893204 chr12:1893206 synonymous SNV . 0 23 hm5C_associated_SNPs_67675 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:1893170-1893207
64251 chr19 54378100 54378100 1 + A C rs379364 54378096 + 54378076 54378116 41 CTGGAGTGCAGTGGTGCGATCTCGACTCACTGCAACCCCCG CTGGAGTGCAGTGGTGCGATCTCGCCTCACTGCAACCCCCG < 41bp 0.912332789577675 0.668819231802548 0.8629205 0.32446146 prediction 0.487027115550255 Functional Loss - MYADM ENSG00000232220 ncRNA_intronic Human antisense chr19:54378096 chr19:54378100 . . 0 25 hm5C_associated_SNPs_67679 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54378065-54378116
64251 chr2 27666311 27666311 1 + G A LGG 27666308 + 27666288 27666328 41 CCCTTCTTTGCTCATGTCTGCAGGGGAGGCTGCTCTATCTG CCCTTCTTTGCTCATGTCTGCAGAGGAGGCTGCTCTATCTG < 41bp 0.744581910971381 0.50107925785485 0.9290011 0.8774878 prediction 0.487005306233062 Functional Loss - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27666308 chr2:27666311 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_67688 0 0 2 U2AF2 POSTAR2 ENCODE chr2:27666242-27666334
64251 chr11 977185 977185 1 + G T LUAD 977182 + 977162 977202 41 GATCTTGTCCCCATGGGCGACTGGACATCCCGAGTGGTGCA GATCTTGTCCCCATGGGCGACTGTACATCCCGAGTGGTGCA < 41bp 0.743499189207574 0.350262060458186 0.19145525 0.19000018 prediction 0.486998378415147 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:977182 chr11:977185 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_67691 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:977164-977187
64251 chr4 1388379 1388379 1 + G A rs56109734 1388376 + 1388356 1388396 41 ATGTGGAGTGCCCGCCTGCTCATGTGCCCATGTGGAGTGCC ATGTGGAGTGCCCGCCTGCTCATATGCCCATGTGGAGTGCC < 41bp 0.743928094782727 0.500429946602236 0.20325458 0.15631518 prediction 0.486996296360983 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388376 chr4:1388379 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_67693 0 0 2 DROSHA POSTAR2 ENCODE chr4:1388298-1388407
64251 chr12 124239023 124239023 1 + G T SARC 124239021 + 124239001 124239041 41 TCCATTCCATCGAGTACTGTCTGGGATGCATCTCCAACACC TCCATTCCATCGAGTACTGTCTTGGATGCATCTCCAACACC < 41bp 0.743472029060771 0.403995020919128 0.39426053 0.08632842 prediction 0.486944058121543 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239021 chr12:124239023 synonymous SNV . 0 23 hm5C_associated_SNPs_67704 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124239001-124239038
64251 chr22 50987891 50987891 1 + G A PRAD 50987888 + 50987868 50987908 41 ACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAGGCAC ACAGACGCCTGGACCCCACGCGCACCACTCCCCGCAGGCAC < 41bp 0.743470225759768 0.491566919734548 0.085978806 0.016817808 prediction 0.486940451519536 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987888 chr22:50987891 synonymous SNV . 0 24 hm5C_associated_SNPs_67706 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr6 43270114 43270114 1 + C T COAD 43270112 + 43270092 43270132 41 CAAGCTGGGACACTGCTGGGCACGGCCCTGGCGTTCGGCAC CAAGCTGGGACACTGCTGGGCATGGCCCTGGCGTTCGGCAC < 41bp 0.750605849105567 0.507136996753702 0.13875732 0.17420357 prediction 0.486937704703731 Functional Loss - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43270112 chr6:43270114 nonsynonymous SNV 0.081 3 23 hm5C_associated_SNPs_67708 0 0 1 GRWD1 POSTAR2 ENCODE chr6:43270053-43270126
64251 chr9 131256904 131256904 1 + A C CHOL 131256900 + 131256880 131256920 41 ACCAACTGCAGGGCTATGAGCGGAAGAACATCGACCTCACA ACCAACTGCAGGGCTATGAGCGGACGAACATCGACCTCACA < 41bp 0.743433063326581 0.365081038169561 0.9001686 0.9257903 prediction 0.486866126653162 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131256900 chr9:131256904 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_67718 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:131256851-131256919
64251 chr2 47249043 47249043 1 + G A BRCA 47249040 + 47249020 47249060 41 TTGCCATGATGGTGATCAGCCTCGGAGAGGAAGCCGGGGAG TTGCCATGATGGTGATCAGCCTCAGAGAGGAAGCCGGGGAG < 41bp 0.746094382033838 0.50266237817962 0.29122826 0.2771312 prediction 0.486864007708436 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47249040 chr2:47249043 nonsynonymous SNV 0.037 0 24 hm5C_associated_SNPs_67721 0 0 1 PPIG POSTAR2 ENCODE chr2:47249006-47249093
64251 chr4 134073044 134073044 1 + G T STAD 134073041 + 134073021 134073061 41 GCGCCTCTACCAGGGCGCAACGGGACTCCAGCGCGTGAGGT GCGCCTCTACCAGGGCGCAACGGTACTCCAGCGCGTGAGGT < 41bp 0.921669182847837 0.678238719281192 0.9385257 0.94423723 prediction 0.486860927133292 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073041 chr4:134073044 synonymous SNV . 0 24 hm5C_associated_SNPs_67722 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:134073044-134073045
64251 chr20 30385294 30385294 1 + A C KIRC 30385293 + 30385273 30385313 41 TCTCAGGAGCCCTTTGTTCCCAAGAAAGAGAAGAAATCAGT TCTCAGGAGCCCTTTGTTCCCCAGAAAGAGAAGAAATCAGT < 41bp 0.796758940320343 0.553332660157821 0.37652326 0.11328539 prediction 0.486852560325045 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30385293 chr20:30385294 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_67724 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:30385268-30385296
64251 chr17 73487171 73487171 1 + C T UCEC 73487169 + 73487149 73487189 41 GGGGCCACTTCCTGAGGGTGCTCGGGGGGACATCGCCAACG GGGGCCACTTCCTGAGGGTGCTTGGGGGGACATCGCCAACG < 41bp 0.791316893545671 0.547898994530347 0.84925395 0.92684126 prediction 0.486835798030647 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73487169 chr17:73487171 synonymous SNV . 0 23 hm5C_associated_SNPs_67731 0 0 3 DDX24 POSTAR2 ENCODE chr17:73487160-73487182
64251 chr19 37210537 37210537 1 + C T LUAD 37210535 + 37210515 37210555 41 ATTGATCATCAGAGAACTCACACAGGAGAGAAACCCTTTGT ATTGATCATCAGAGAACTCACATAGGAGAGAAACCCTTTGT < 41bp 0.743415533159651 0.490340462014066 0.123363614 0.36223605 prediction 0.486831066319301 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37210535 chr19:37210537 nonsynonymous SNV 0.502 4 23 hm5C_associated_SNPs_67734 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37210513-37210548
64251 chr17 41477378 41477378 1 + G T SARC 41477376 + 41477356 41477396 41 CTGTGGCGCTCTTATACCCGCCGGACAGACGGTCTAGTGTT CTGTGGCGCTCTTATACCCGCCTGACAGACGGTCTAGTGTT < 41bp 0.743400463321362 0.394826666327783 0.18504661 0.07161769 prediction 0.486800926642724 Functional Loss - ARL4D ENSG00000175906 CDS Human protein_coding chr17:41477376 chr17:41477378 nonsynonymous SNV 0.964 3 23 hm5C_associated_SNPs_67737 0 0 1 SLTM POSTAR2 ENCODE chr17:41477347-41477438
64251 chr19 36245009 36245009 1 + G A STAD 36245006 + 36244986 36245026 41 ACCCGGAGATGCCTGCAGATCCCGCATCCCATCTCCACTGC ACCCGGAGATGCCTGCAGATCCCACATCCCATCTCCACTGC < 41bp 0.755449590832925 0.512049842913352 0.11586669 0.07533339 prediction 0.486799495839147 Functional Loss - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36245006 chr19:36245009 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_67738 0 0 1 UCHL5 POSTAR2 ENCODE chr19:36244953-36245046
64251 chr7 150771788 150771788 1 + G A STAD 150771785 + 150771765 150771805 41 CTGAGCGTTCCCAGTGGATTCTCGGTGACTGCCCCAGAAAA CTGAGCGTTCCCAGTGGATTCTCAGTGACTGCCCCAGAAAA < 41bp 0.751877397317176 0.508489870778082 0.33715612 0.25101602 prediction 0.486775053078188 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771785 chr7:150771788 synonymous SNV . 0 24 hm5C_associated_SNPs_67741 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:150771781-150771801
64251 chr9 131446240 131446240 1 + G T rs191311210 131446238 + 131446218 131446258 41 AACCAAGACCACCTCCTGCTCTGGGACCGGAGGAGACATCG AACCAAGACCACCTCCTGCTCTTGGACCGGAGGAGACATCG < 41bp 0.884530577707196 0.641152136876374 0.24021888 0.06842172 prediction 0.486756881661643 Functional Loss - SET ENSG00000119335 CDS Human protein_coding chr9:131446238 chr9:131446240 synonymous SNV . 0 23 hm5C_associated_SNPs_67743 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131446213-131446248
64251 chrX 135586563 135586563 1 + C T COAD 135586561 + 135586541 135586581 41 TGAGAGGCGAGCCGGACCATCCCGGATGCGCCATGAGCGAG TGAGAGGCGAGCCGGACCATCCTGGATGCGCCATGAGCGAG < 41bp 0.794312577077595 0.550937023635402 0.17672083 0.20449045 prediction 0.486751106884385 Functional Loss - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135586561 chrX:135586563 nonsynonymous SNV 0.872 4 23 hm5C_associated_SNPs_67745 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chrX:135586555-135586581
64251 chr12 105536925 105536925 1 + C T GBM 105536923 + 105536903 105536943 41 AGTACATGTTCAGTGCTTTGCGCGACTGTGTACCTGCTATG AGTACATGTTCAGTGCTTTGCGTGACTGTGTACCTGCTATG < 41bp 0.743365131135622 0.463737066317748 0.114290684 0.16268888 prediction 0.486730262271244 Functional Loss - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105536923 chr12:105536925 synonymous SNV . 0 23 hm5C_associated_SNPs_67747 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:105536913-105536929
64251 chr12 66704320 66704320 1 + G T STAD 66704318 + 66704298 66704338 41 GGCTATAGAAGTTTTGCTCACAGCACCTACAGGGAAAGCAG GGCTATAGAAGTTTTGCTCACATCACCTACAGGGAAAGCAG < 41bp 0.74336249877238 0.415474043305518 0.36091873 0.06694627 prediction 0.48672499754476 Functional Loss - HELB ENSG00000127311 CDS Human protein_coding chr12:66704318 chr12:66704320 nonsynonymous SNV 0.076 4 23 hm5C_associated_SNPs_67748 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:66704295-66704321
64251 chr22 46611214 46611214 1 + C T COAD 46611212 + 46611192 46611232 41 GGCTATCATTACGGAGTCCACGCGTGTGAAGGCTGCAAGGT GGCTATCATTACGGAGTCCACGTGTGTGAAGGCTGCAAGGT < 41bp 0.77897309366845 0.535611640970198 0.18534866 0.12076026 prediction 0.486722905396504 Functional Loss - PPARA ENSG00000186951 CDS Human protein_coding chr22:46611212 chr22:46611214 nonsynonymous SNV 0.918 5 23 hm5C_associated_SNPs_67749 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:46611193-46611214
64251 chr1 224345396 224345396 1 + C T UCEC 224345394 + 224345374 224345414 41 CCTCGGAAACGAAAAAAGGCCACGGAAGCCATAGACTCTCT CCTCGGAAACGAAAAAAGGCCATGGAAGCCATAGACTCTCT < 41bp 0.768822598644897 0.525461908653067 0.20087019 0.19671509 prediction 0.486721379983661 Functional Loss - FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224345394 chr1:224345396 nonsynonymous SNV 0.056 0 23 hm5C_associated_SNPs_67750 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:224345380-224345400
64251 chr9 139973510 139973510 1 + C T UCEC 139973508 + 139973488 139973528 41 GCCGGGGAGTGGAGTTTGTGCACGTGTACTGTGTGGACAAC GCCGGGGAGTGGAGTTTGTGCATGTGTACTGTGTGGACAAC < 41bp 0.797873716181291 0.554528944850464 0.37508076 0.28304428 prediction 0.486689542661653 Functional Loss - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139973508 chr9:139973510 synonymous SNV . 0 23 hm5C_associated_SNPs_67758 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:139973475-139973523
64251 chr13 52158661 52158661 1 + G C rs531246959 52158657 + 52158637 52158677 41 GGTGCCTGAAGCAGGGAGCGCGGAGTCGTTCCCGAGAGAGG GGTGCCTGAAGCAGGGAGCGCGGACTCGTTCCCGAGAGAGG < 41bp 0.743341191224789 0.487036285408089 0.8433461 0.734442 prediction 0.486682382449578 Functional Loss - WDFY2 ENSG00000139668 UTR5 Human protein_coding chr13:52158657 chr13:52158661 . . 0 25 hm5C_associated_SNPs_67760 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr13:52158661-52158662
64251 chr2 220098866 220098866 1 + C T LUAD 220098864 + 220098844 220098884 41 TTTTATGGCAGAAGAAGACCCTCGGGAAGCAGTCAGACTGC TTTTATGGCAGAAGAAGACCCTTGGGAAGCAGTCAGACTGC < 41bp 0.798875443812189 0.555537670059919 0.2553916 0.18228677 prediction 0.486675547504539 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098864 chr2:220098866 nonsynonymous SNV 0.680 2 23 hm5C_associated_SNPs_67761 0 0 8 BUD13 POSTAR2 ENCODE chr2:220098849-220098957
64251 chr16 67168257 67168257 1 + G T UCEC 67168255 + 67168235 67168275 41 GCTCATTCTGTGTCTGTCCCCAGGGCTCCCATGATGCCTCT GCTCATTCTGTGTCTGTCCCCATGGCTCCCATGATGCCTCT < 41bp 0.743335294756299 0.381690219490266 0.89054567 0.49877775 prediction 0.486670589512599 Functional Loss - C16orf70 ENSG00000125149 splicing Human protein_coding chr16:67168255 chr16:67168257 . 0.976 0 23 hm5C_associated_SNPs_67762 0 0 11 BUD13 POSTAR2 ENCODE chr16:67168200-67168267
64251 chr20 31607460 31607460 1 + C T SKCM 31607458 + 31607438 31607478 41 GTGCCACACCTGTGGCCATGCTCCACACAAACAACGCCACC GTGCCACACCTGTGGCCATGCTTCACACAAACAACGCCACC < 41bp 0.743334820969999 0.470395152219394 0.44349623 0.20204088 prediction 0.486669641939998 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31607458 chr20:31607460 synonymous SNV . 0 23 hm5C_associated_SNPs_67763 0 0 2 RPS3 POSTAR2 ENCODE chr20:31607409-31607461
64251 chr22 30824464 30824464 1 + C T HNSC 30824462 + 30824442 30824482 41 CCTACAGGTCGGTGGATTTCCTCCTGGACTCCAGCCTGCGC CCTACAGGTCGGTGGATTTCCTTCTGGACTCCAGCCTGCGC < 41bp 0.743311644121124 0.475748910467033 0.070598334 0.07490933 prediction 0.486623288242247 Functional Loss - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30824462 chr22:30824464 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_67771 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:30824444-30824476
64251 chr1 110882461 110882461 1 + G T LUSC 110882459 + 110882439 110882479 41 GGCGAATCGCGCAGCAGCTCCCGGGGTGGAGGCGGGGAGTC GGCGAATCGCGCAGCAGCTCCCTGGGTGGAGGCGGGGAGTC < 41bp 0.888653930889882 0.645351704802003 0.9129416 0.40526843 prediction 0.486604452175758 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882459 chr1:110882461 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_67776 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:110882452-110882475
64251 chr1 227920610 227920610 1 - G A CESC 227920612 - 227920592 227920632 41 GAGGTCAGCGAGTGGAGGGACTCCATGCCCGACTGGCACCA GAGGTCAGCGAGTGGAGGGACTTCATGCCCGACTGGCACCA < 41bp 0.835695196924367 0.592394199894897 0.9393783 0.39925984 prediction 0.486601994058939 Functional Loss - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227920612 chr1:227920610 nonsynonymous SNV 0.991 2 23 hm5C_associated_SNPs_67777 0 0 2 PPIG POSTAR2 ENCODE chr1:227920598-227920667
64251 chr7 86813798 86813798 1 + G T UCEC 86813796 + 86813776 86813816 41 AGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAGCT AGCCAGGTGACATAGTCACACATGGTGTGTCTTGGGCAGCT < 41bp 0.884969411123682 0.6416690391382 0.88375294 0.30417633 prediction 0.486600743970963 Functional Loss - DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813796 chr7:86813798 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_67778 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:86813710-86813812
64251 chr16 4384864 4384864 1 + C T CESC 4384862 + 4384842 4384882 41 CCTTCCAGTTCTTCCTGCCCCTCGGCTCCGGGGGGGCCCTG CCTTCCAGTTCTTCCTGCCCCTTGGCTCCGGGGGGGCCCTG < 41bp 0.816424286383356 0.57312605226158 0.050170034 0.051408768 prediction 0.486596468243552 Functional Loss - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4384862 chr16:4384864 synonymous SNV . 0 23 hm5C_associated_SNPs_67781 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:4384860-4384880
64251 chr10 18823074 18823074 1 + C T READ 18823072 + 18823052 18823092 41 TTGCAGTTGGTGGTCCTTGACGCGGATACAATTAATCATCC TTGCAGTTGGTGGTCCTTGACGTGGATACAATTAATCATCC < 41bp 0.761318062681378 0.518023157042014 0.48564506 0.48054886 prediction 0.486589811278728 Functional Loss - CACNB2 ENSG00000165995 CDS Human protein_coding chr10:18823072 chr10:18823074 nonsynonymous SNV 0.480 4 23 hm5C_associated_SNPs_67783 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr10:18823053-18823074
64251 chr16 2867450 2867450 1 + G C rs71386691 2867446 + 2867426 2867466 41 CGCAGAGTCGCAGGAGGCGGCGCCGTTATCAGGTAGGGCGC CGCAGAGTCGCAGGAGGCGGCGCCCTTATCAGGTAGGGCGC < 41bp 0.82152959121015 0.578244690756317 0.8825513 0.8063768 prediction 0.486569800907666 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2867446 chr16:2867450 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_67786 0 0 11 BUD13 POSTAR2 ENCODE chr16:2867357-2867454
64251 chr17 37816701 37816701 1 + T C STAD 37816700 + 37816680 37816720 41 CCAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGG CCAGACCTTCCTGCCCTGTCCCGCGGAGCTCGTGTACCAGG < 41bp 0.756617068572962 0.513334483262535 0.6004451 0.8547129 prediction 0.486565170620854 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37816700 chr17:37816701 synonymous SNV . 0 22 hm5C_associated_SNPs_67788 0 0 5 DDX24 POSTAR2 ENCODE chr17:37816690-37816767
64251 chr16 129524 129524 1 + G C BRCA 129520 + 129500 129540 41 AGGCACCTGCAGAGCAGCCACACAGCTCGTCCGATGCAGCC AGGCACCTGCAGAGCAGCCACACACCTCGTCCGATGCAGCC < 41bp 0.743266844214648 0.45265140281888 0.7602857 0.29528314 prediction 0.486533688429295 Functional Loss - MPG ENSG00000103152 CDS Human protein_coding chr16:129520 chr16:129524 nonsynonymous SNV 0.070 1 25 hm5C_associated_SNPs_67794 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:129524-129564
64251 chr7 2472729 2472729 1 + C T STAD 2472727 + 2472707 2472747 41 GCATTCGACGACATCCCCAACTCGGAGCTGAGCCACCTGAT GCATTCGACGACATCCCCAACTTGGAGCTGAGCCACCTGAT < 41bp 0.756275667283489 0.513012483191037 0.27569532 0.22397634 prediction 0.486526368184904 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472727 chr7:2472729 nonsynonymous SNV 0.953 0 23 hm5C_associated_SNPs_67795 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr7:2472718-2472745
64251 chr22 35811868 35811868 1 + C T LUAD 35811866 + 35811846 35811886 41 AGCGCAGCTGGACTGACAGCCTCGGTGATGAGGGACCCTTC AGCGCAGCTGGACTGACAGCCTTGGTGATGAGGGACCCTTC < 41bp 0.74326134721951 0.46220652153524 0.19794187 0.17657295 prediction 0.48652269443902 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811866 chr22:35811868 nonsynonymous SNV 0.951 4 23 hm5C_associated_SNPs_67796 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr22:35811849-35811879
64251 chr19 15224472 15224472 1 + C T ESCA 15224470 + 15224450 15224490 41 GGCAGACCCCGAAGTGGTGACTCGGCCCCGCGGTCGAGGAG GGCAGACCCCGAAGTGGTGACTTGGCCCCGCGGTCGAGGAG < 41bp 0.743260367561932 0.493167397230977 0.34224534 0.32708263 prediction 0.486520735123865 Functional Loss - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15224470 chr19:15224472 nonsynonymous SNV 0.651 3 23 hm5C_associated_SNPs_67797 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:15224447-15224488
64251 chr9 129453232 129453232 1 + G T LUAD 129453230 + 129453210 129453250 41 TCTGCTGCTGCGTGTGTGAACGGCAGCTACGCAAGGGCGAC TCTGCTGCTGCGTGTGTGAACGTCAGCTACGCAAGGGCGAC < 41bp 0.899375271824994 0.656142272745834 0.32904977 0.24320045 prediction 0.486465998158319 Functional Loss - LMX1B ENSG00000136944 CDS Human protein_coding chr9:129453230 chr9:129453232 synonymous SNV . 0 23 hm5C_associated_SNPs_67804 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:129453204-129453244
64251 chr19 19609528 19609528 1 + C T UCEC 19609526 + 19609506 19609546 41 GGTGCAGAACCTACTGGAGACACAAGGTGAGTGGCCTGGAC GGTGCAGAACCTACTGGAGACATAAGGTGAGTGGCCTGGAC < 41bp 0.74323062311506 0.471015830089735 0.42517444 0.6799733 prediction 0.486461246230119 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19609526 chr19:19609528 stopgain 0.963 1 23 hm5C_associated_SNPs_67805 0 0 2 PRPF8 POSTAR2 ENCODE chr19:19609527-19609576
64251 chr2 66667041 66667041 1 + C T COAD 66667039 + 66667019 66667059 41 AATTAGCTACTTGTACCCCCCGCGAGCCGGGGGTGGCGGGC AATTAGCTACTTGTACCCCCCGTGAGCCGGGGGTGGCGGGC < 41bp 0.834263278561722 0.591036499623563 0.6850753 0.16313249 prediction 0.486453557876317 Functional Loss - MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66667039 chr2:66667041 synonymous SNV . 0 23 hm5C_associated_SNPs_67807 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:66667011-66667042
64251 chr1 160390898 160390898 1 + C T UCEC 160390896 + 160390876 160390916 41 GGCTGTGATTGCAGCGGCAGCTCGGAGGCGGGACAACAGTC GGCTGTGATTGCAGCGGCAGCTTGGAGGCGGGACAACAGTC < 41bp 0.743218308899477 0.460089720958943 0.83752775 0.8234022 prediction 0.486436617798954 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160390896 chr1:160390898 nonsynonymous SNV 0.725 5 23 hm5C_associated_SNPs_67809 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:160390893-160390916
64251 chr22 50649076 50649076 1 + G A THYM 50649073 + 50649053 50649093 41 GTGGCAGGTACGACCCCGACCACGTGTGCAATGCCTCCGAC GTGGCAGGTACGACCCCGACCACATGTGCAATGCCTCCGAC < 41bp 0.754851705040366 0.511638458289972 0.4728973 0.69116354 prediction 0.486426493500788 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649073 chr22:50649076 unknown 0.868 4 24 hm5C_associated_SNPs_67810 0 0 3 BUD13 POSTAR2 ENCODE chr22:50649056-50649093
64251 chr22 44328959 44328959 1 + G A UCEC 44328956 + 44328936 44328976 41 TCTCGAGAGCTTTTGTCCCCCCGGATCTCAAGGTGAGTTGG TCTCGAGAGCTTTTGTCCCCCCGAATCTCAAGGTGAGTTGG < 41bp 0.749706129605459 0.506497139463457 0.35035372 0.07670891 prediction 0.486417980284004 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44328956 chr22:44328959 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_67811 0 0 3 PPIG POSTAR2 ENCODE chr22:44328915-44328977
64251 chr12 4465384 4465384 1 + G C rs190864759 4465380 + 4465360 4465400 41 AGCAAGGCCAGGGATGTTGGCAGGGACCAGGCCAGAGTGCC AGCAAGGCCAGGGATGTTGGCAGGCACCAGGCCAGAGTGCC < 41bp 0.748545013460924 0.505338208555495 0.91990256 0.85499656 prediction 0.486413609810858 Functional Loss - TIGAR ENSG00000078237;ENSG00000118972 intergenic Human other chr12:4465380 chr12:4465384 . . 0 25 hm5C_associated_SNPs_67814 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:4465359-4465387
64251 chr1 156347250 156347250 1 + G A COAD 156347247 + 156347227 156347267 41 AGGGCTTTCTCCACTCCTTCCACGGTGGCCACATCCATGTT AGGGCTTTCTCCACTCCTTCCACAGTGGCCACATCCATGTT < 41bp 0.767955905824405 0.524749510175739 0.2507808 0.11565259 prediction 0.486412791297332 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156347247 chr1:156347250 nonsynonymous SNV 0.027 0 24 hm5C_associated_SNPs_67816 0 0 1 HNRNPK POSTAR2 ENCODE chr1:156347244-156347308
64251 chr16 67199689 67199689 1 + G A LUSC 67199686 + 67199666 67199706 41 AGGCCGGAGCGCGACCACGTCGAGTTCCAGCACCCGAGCTT AGGCCGGAGCGCGACCACGTCGAATTCCAGCACCCGAGCTT < 41bp 0.752267452688803 0.509061197185409 0.44282913 0.23156476 prediction 0.486412511006788 Functional Loss - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67199686 chr16:67199689 synonymous SNV . 0 24 hm5C_associated_SNPs_67817 0 0 2 BUD13 POSTAR2 ENCODE chr16:67199636-67199689
64251 chr19 16236305 16236305 1 + C T COAD 16236303 + 16236283 16236323 41 ATCATGCTGGTCTACGACATCACCAACGAGAAGTCCTTCGA ATCATGCTGGTCTACGACATCATCAACGAGAAGTCCTTCGA < 41bp 0.841132498350921 0.597930044242389 0.025150448 0.015885621 prediction 0.486404908217065 Functional Loss - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16236303 chr19:16236305 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_67818 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:16236281-16236312
64251 chr19 3382208 3382208 1 + G A LUSC 3382205 + 3382185 3382225 41 TTGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTGGCCTAC TTGGCGTGGCCGTCAAGGAGCTGAACCTCTACCTGGCCTAC < 41bp 0.760954002195349 0.517755225851032 0.38886485 0.7029394 prediction 0.486397552688634 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3382205 chr19:3382208 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_67820 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:3382177-3382218
64251 chr1 148932815 148932815 1 + C T SKCM 148932813 + 148932793 148932833 41 GCCAGACCCCCAAGCTAGCCCGCCAGGCCTCCATAGAGCTG GCCAGACCCCCAAGCTAGCCCGTCAGGCCTCCATAGAGCTG < 41bp 0.778257105201936 0.535082761184892 0.010473877 0.005887568 prediction 0.486348688034089 Functional Loss - LOC645166 ENSG00000232527 ncRNA_exonic Human lincRNA chr1:148932813 chr1:148932815 . . 0 23 hm5C_associated_SNPs_67832 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:148932805-148932854
64251 chr1 27661929 27661929 1 + C T SKCM 27661927 + 27661907 27661947 41 CTTCTCCTGGGCATCATCCTCACCGTCAGCCTGGTCTTTAA CTTCTCCTGGGCATCATCCTCATCGTCAGCCTGGTCTTTAA < 41bp 0.76425352485867 0.521084712089057 0.26657605 0.28324386 prediction 0.486337625539227 Functional Loss - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27661927 chr1:27661929 nonsynonymous SNV 0.570 1 23 hm5C_associated_SNPs_67835 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:27661885-27661931
64251 chr2 204103851 204103851 1 + C T UCEC 204103849 + 204103829 204103869 41 TGGTGGGAGCCGTGCTCTACCTCTATCCGGTGAGCGCCGTC TGGTGGGAGCCGTGCTCTACCTTTATCCGGTGAGCGCCGTC < 41bp 0.743161523942143 0.490112919181439 0.9283242 0.093260914 prediction 0.486323047884286 Functional Loss - CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204103849 chr2:204103851 synonymous SNV . 0 23 hm5C_associated_SNPs_67837 0 0 3 DDX3X POSTAR2 ENCODE chr2:204103800-204103864
64251 chr6 158502193 158502193 1 + C T rs145408972 158502191 + 158502171 158502211 41 TCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGG TCAGGAAGTCGATGTGGGTGCTTGGGAGAGGGTTTTCCAGG < 41bp 0.743152810308745 0.465738179928091 0.42182672 0.6655251 prediction 0.48630562061749 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158502191 chr6:158502193 nonsynonymous SNV 0.836 4 23 hm5C_associated_SNPs_67840 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr6:158502184-158502202
64251 chr9 139701456 139701456 1 + C T rs150880294 139701454 + 139701434 139701474 41 GTGAGGGACACCCTGGAGTCCTCGACTCTGATGGAGAAGTA GTGAGGGACACCCTGGAGTCCTTGACTCTGATGGAGAAGTA < 41bp 0.828459650866046 0.585314424046551 0.2223891 0.1646752 prediction 0.486290453638989 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139701454 chr9:139701456 nonsynonymous SNV 0.300 1 23 hm5C_associated_SNPs_67843 0 0 4 GRWD1 POSTAR2 ENCODE chr9:139701455-139701482
64251 chr6 27115055 27115055 1 + G A KIRC 27115052 + 27115032 27115072 41 AGCGGGTTGGAGCCGGCGCGCCAGTGTACCTGGCTGCGGTG AGCGGGTTGGAGCCGGCGCGCCAATGTACCTGGCTGCGGTG < 41bp 0.744567961262533 0.501422926709054 0.63900274 0.29405227 prediction 0.486290069106958 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115052 chr6:27115055 nonsynonymous SNV 0.323 4 24 hm5C_associated_SNPs_67845 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27114964-27115114
64251 chr7 137776584 137776584 1 + T C rs187887082 137776583 + 137776563 137776603 41 GGACACTCAGGGTCCTCCAGCTAGATTATGTGGATCTTTAC GGACACTCAGGGTCCTCCAGCCAGATTATGTGGATCTTTAC < 41bp 0.771757527460263 0.52861791987312 0.11368409 0.79664063 prediction 0.486279215174287 Functional Loss - AKR1D1 ENSG00000122787 CDS Human protein_coding chr7:137776583 chr7:137776584 nonsynonymous SNV 0.017 4 22 hm5C_associated_SNPs_67847 0 0 1 GRWD1 POSTAR2 ENCODE chr7:137776513-137776637
64251 chr1 168549377 168549377 1 + G T CESC 168549374 + 168549354 168549394 41 CGACTGCCGGTTAGCAGAATCAAGACCTACACCATCACGGA CGACTGCCGGTTAGCAGAATCAATACCTACACCATCACGGA < 41bp 0.921392052448868 0.678253098586146 0.5446172 0.09254143 prediction 0.486277907725444 Functional Loss - XCL1 ENSG00000143184 CDS Human protein_coding chr1:168549374 chr1:168549377 nonsynonymous SNV 0.960 2 24 hm5C_associated_SNPs_67848 0 0 1 U2AF2 POSTAR2 ENCODE chr1:168549286-168549377
64251 chr19 2917413 2917413 1 + C T STAD 2917411 + 2917391 2917431 41 GGGAGAGCCTTCATTTATCCCTCGACATTTCAAAGACACAT GGGAGAGCCTTCATTTATCCCTTGACATTTCAAAGACACAT < 41bp 0.743131920656448 0.465457879170611 0.033119053 0.0048252046 prediction 0.486263841312896 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917411 chr19:2917413 nonsynonymous SNV 0.011 2 23 hm5C_associated_SNPs_67850 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:2917397-2917425
64251 chr20 39741481 39741481 1 + G T UCEC 39741478 + 39741458 39741498 41 CGGCTGAAAAAATGTGTGGACAAGATCCGGAACCAGTATCG CGGCTGAAAAAATGTGTGGACAATATCCGGAACCAGTATCG < 41bp 0.743124916378477 0.350736601986948 0.3905088 0.15546077 prediction 0.486249832756953 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39741478 chr20:39741481 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_67855 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:39741463-39741493
64251 chr13 20235872 20235872 1 + C T PRAD 20235870 + 20235850 20235890 41 ATGACACTGGTGATGCTTGCCGCCGCCGGAGGGCAGGACGA ATGACACTGGTGATGCTTGCCGTCGCCGGAGGGCAGGACGA < 41bp 0.743121849276394 0.456536483595453 0.49502376 0.39605784 prediction 0.486243698552787 Functional Loss - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20235870 chr13:20235872 nonsynonymous SNV 0.364 4 23 hm5C_associated_SNPs_67858 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr13:20235871-20235872
64251 chr12 101777001 101777001 1 + C T UCEC 101776999 + 101776979 101777019 41 AGGAAGAGGTGAAGGAAGAGCTCGGCAGGCCGGCCACGCTG AGGAAGAGGTGAAGGAAGAGCTTGGCAGGCCGGCCACGCTG < 41bp 0.743116585535672 0.490327188574464 0.5813707 0.5645957 prediction 0.486233171071344 Functional Loss - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101776999 chr12:101777001 synonymous SNV . 0 23 hm5C_associated_SNPs_67860 0 0 9 AGGF1 POSTAR2 ENCODE chr12:101776899-101777071
64251 chr22 30818774 30818774 1 + G T rs141624081 30818772 + 30818752 30818792 41 ACTTCAGGGAAGTCAGCTGCCGGGGAGAAACTTGCTCCTAA ACTTCAGGGAAGTCAGCTGCCGTGGAGAAACTTGCTCCTAA < 41bp 0.743107608037363 0.413707239098984 0.9354257 0.8515307 prediction 0.486215216074726 Functional Loss - SEC14L2 ENSG00000100003 UTR3 Human protein_coding chr22:30818772 chr22:30818774 . . 0 23 hm5C_associated_SNPs_67867 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:30818760-30818795
64251 chr19 11759282 11759282 1 + G T UCEC 11759280 + 11759260 11759300 41 GATGTGATGTGGGAAATCATCAGGAACCTGATGTCTGTAGG GATGTGATGTGGGAAATCATCATGAACCTGATGTCTGTAGG < 41bp 0.873632641543538 0.630525439453396 0.8863965 0.40376952 prediction 0.486214404180284 Functional Loss - ZNF627;ZNF833P ENSG00000197332;ENSG00000267500 ncRNA_exonic Human other chr19:11759280 chr19:11759282 . . 0 23 hm5C_associated_SNPs_67868 0 0 4 UCHL5 POSTAR2 ENCODE chr19:11759210-11759295
64251 chr6 52268902 52268902 1 + G T LIHC 52268900 + 52268880 52268920 41 CCATCTGTACGCTCTCCCAGCTGGAGGCCATCCTCCTGGAC CCATCTGTACGCTCTCCCAGCTTGAGGCCATCCTCCTGGAC < 41bp 0.888326218392458 0.645223150124062 0.7088086 0.39320114 prediction 0.486206136536792 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268900 chr6:52268902 synonymous SNV . 0 23 hm5C_associated_SNPs_67871 0 0 3 IGF2BP2 POSTAR2 ENCODE chr6:52268889-52268981
64251 chr7 77325884 77325884 1 + C T CESC 77325882 + 77325862 77325902 41 TTTGGCAAGCTGCAACTCTCCTCCCGGGACCCTCCGGGTTC TTTGGCAAGCTGCAACTCTCCTTCCGGGACCCTCCGGGTTC < 41bp 0.743081410707917 0.486958524279134 0.32705382 0.09634724 prediction 0.486162821415834 Functional Loss - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77325882 chr7:77325884 nonsynonymous SNV 0.270 0 23 hm5C_associated_SNPs_67877 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:77325818-77325893
64251 chr19 2799757 2799757 1 + C T rs143179443 2799755 + 2799735 2799775 41 AACAAGAACCTGAACGAGGACACGACCTTCCTGCCCTTCAC AACAAGAACCTGAACGAGGACATGACCTTCCTGCCCTTCAC < 41bp 0.820064691458652 0.57698385494219 0.11662364 0.14166126 prediction 0.486161673032924 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2799755 chr19:2799757 nonsynonymous SNV 0.980 1 23 hm5C_associated_SNPs_67878 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:2799702-2799762
64251 chr3 42243952 42243952 1 + G C SKCM 42243951 + 42243931 42243971 41 CGATGAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAG CGATGAGCGGAGTAAGAAGCCCGGGACGCCGGGCACCCCAG < 41bp 0.85901071221757 0.615932343290747 0.93686795 0.883163 prediction 0.486156737853647 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42243951 chr3:42243952 synonymous SNV . 0 22 hm5C_associated_SNPs_67879 0 0 5 GRWD1 POSTAR2 ENCODE chr3:42243925-42244007
64251 chr11 64021948 64021948 1 + G T UCEC 64021946 + 64021926 64021966 41 CCCAATGGCTTCTTCTTGTACTGGACGGGCCCCAACATGGT CCCAATGGCTTCTTCTTGTACTTGACGGGCCCCAACATGGT < 41bp 0.743077796972762 0.412999944611962 0.18582433 0.08361769 prediction 0.486155593945525 Functional Loss - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64021946 chr11:64021948 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_67880 0 0 7 DDX24 POSTAR2 ENCODE chr11:64021931-64021964
64251 chrX 48433977 48433977 1 + G T SARC 48433975 + 48433955 48433995 41 TTGTCAAGGACCGGGAGACTCAGCGGTCCAGGGGTTTTGGT TTGTCAAGGACCGGGAGACTCATCGGTCCAGGGGTTTTGGT < 41bp 0.904506601581173 0.661428891412567 0.93275595 0.34322143 prediction 0.486155420337212 Functional Loss - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48433975 chrX:48433977 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_67881 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48433955-48434021
64251 chr20 42089159 42089159 1 + C T SKCM 42089157 + 42089137 42089177 41 TTGTTTTTCTCCTAATAGGTCTCGATCTAGAAGACGGTCAC TTGTTTTTCTCCTAATAGGTCTTGATCTAGAAGACGGTCAC < 41bp 0.743069153631805 0.450172169349521 0.100836664 0.0762929 prediction 0.486138307263611 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089157 chr20:42089159 stopgain 0.985 1 23 hm5C_associated_SNPs_67884 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221659 chr20:42089140-42089160
64251 chr9 124546143 124546143 1 + G A rs10985372 124546140 + 124546120 124546160 41 GAGCAGGAGCTTGGGTCTCTCTCGGCCCCTGTCTGTTCCCA GAGCAGGAGCTTGGGTCTCTCTCAGCCCCTGTCTGTTCCCA < 41bp 0.746532955667996 0.503475268074106 0.57840896 0.4384566 prediction 0.486115375187779 Functional Loss - DAB2IP ENSG00000136848 UTR3 Human protein_coding chr9:124546140 chr9:124546143 . . 0 24 hm5C_associated_SNPs_67889 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:124546120-124546144
64251 chr1 29611311 29611311 1 + G T UCEC 29611308 + 29611288 29611328 41 CGGAGGAGATGGGGCTTATCCTGGGCATCTGTGCAGGGGGG CGGAGGAGATGGGGCTTATCCTGTGCATCTGTGCAGGGGGG < 41bp 0.91738249473971 0.674326385790554 0.92374736 0.40279 prediction 0.486112217898312 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29611308 chr1:29611311 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_67890 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29611283-29611318
64251 chr19 30935400 30935400 1 + C T LGG 30935398 + 30935378 30935418 41 GTTGTGCGACTTCGCGGCTTCGCAGGAGGAGGAGCTCATCA GTTGTGCGACTTCGCGGCTTCGTAGGAGGAGGAGCTCATCA < 41bp 0.743053079417697 0.481167510436409 0.38545462 0.6392641 prediction 0.486106158835394 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935398 chr19:30935400 stopgain 0.998 1 23 hm5C_associated_SNPs_67892 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:30935391-30935419
64251 chr8 40011145 40011145 1 + C T SKCM 40011143 + 40011123 40011163 41 CTACCACTTCGACACAGCCTCTCGTAAGAAAGCCGTGGGCA CTACCACTTCGACACAGCCTCTTGTAAGAAAGCCGTGGGCA < 41bp 0.743050600012799 0.486707732884198 0.07149163 0.065250576 prediction 0.486101200025597 Functional Loss - C8orf4 ENSG00000176907 CDS Human protein_coding chr8:40011143 chr8:40011145 nonsynonymous SNV 0.953 4 23 hm5C_associated_SNPs_67895 0 0 1 GRWD1 POSTAR2 ENCODE chr8:40011064-40011221
64251 chr19 36273546 36273546 1 + C T UCEC 36273544 + 36273524 36273564 41 AGGAGCGTCTGGTGCGGGTGCACGATGTCATCCAGCAGCTG AGGAGCGTCTGGTGCGGGTGCATGATGTCATCCAGCAGCTG < 41bp 0.798787845038633 0.555748450838457 0.3113591 0.38152993 prediction 0.486078788400351 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36273544 chr19:36273546 synonymous SNV . 0 23 hm5C_associated_SNPs_67899 0 0 3 DDX24 POSTAR2 ENCODE chr19:36273498-36273578
64251 chr16 30974857 30974857 1 + G A rs141357385 30974854 + 30974834 30974874 41 CTGAGTGAGAAGTTCCAAGGCTCGGGTGCAGCCACTGAGAC CTGAGTGAGAAGTTCCAAGGCTCAGGTGCAGCCACTGAGAC < 41bp 0.743031694816531 0.498809512357937 0.13600734 0.110163 prediction 0.486063389633063 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30974854 chr16:30974857 synonymous SNV . 0 24 hm5C_associated_SNPs_67902 0 0 1 BUD13 POSTAR2 ENCODE chr16:30974844-30974882
64251 chr9 34657108 34657108 1 + G A UCEC 34657105 + 34657085 34657125 41 TCTTGCACTTGGAGTCCCAGCCAGATCAGCGGTTTACCCAC TCTTGCACTTGGAGTCCCAGCCAAATCAGCGGTTTACCCAC < 41bp 0.743018947346811 0.495638549520104 0.29715908 0.2777785 prediction 0.486037894693621 Functional Loss - IL11RA ENSG00000137070;ENSG00000258728 CDS Human other chr9:34657105 chr9:34657108 synonymous SNV . 0 24 hm5C_associated_SNPs_67906 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:34657087-34657111
64251 chr12 52467483 52467483 1 + G T LUAD 52467480 + 52467460 52467500 41 AGGTGTCGGTGGAGGGGCGGCAGGTGGAGGAGGCCATGCTG AGGTGTCGGTGGAGGGGCGGCAGTTGGAGGAGGCCATGCTG < 41bp 0.921128010735065 0.678114202173797 0.91702586 0.85479057 prediction 0.486027617122537 Functional Loss - ATG101 ENSG00000123395 CDS Human protein_coding chr12:52467480 chr12:52467483 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_67908 0 0 1 DDX55 POSTAR2 ENCODE chr12:52467354-52467511
64251 chr6 158485782 158485782 1 + G A SKCM 158485779 + 158485759 158485799 41 AGAGCCCTGGAAGGGAAGGCCAAGGTAGGGCCCCGCCGAGG AGAGCCCTGGAAGGGAAGGCCAAAGTAGGGCCCCGCCGAGG < 41bp 0.745230986472206 0.502225672232251 0.8418461 0.83348835 prediction 0.486010628479909 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158485779 chr6:158485782 synonymous SNV . 0 24 hm5C_associated_SNPs_67911 0 0 6 EFTUD2 POSTAR2 ENCODE chr6:158485778-158485895
64251 chr1 229779403 229779403 1 + G C SARC 229779399 + 229779379 229779419 41 TGGTGATGCAGTGTATTCTCCAGGGACTGGATGTCAGTAAC TGGTGATGCAGTGTATTCTCCAGGCACTGGATGTCAGTAAC < 41bp 0.74298799335383 0.450057105567441 0.9107932 0.80863416 prediction 0.485975986707661 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229779399 chr1:229779403 nonsynonymous SNV 0.068 3 25 hm5C_associated_SNPs_67916 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:229779344-229779435
64251 chr15 91136915 91136915 1 + G A rs112990767 91136912 + 91136892 91136932 41 GTTCGGGGAACCCGCCATCACGGGCTGGTGGAGAGGCCATC GTTCGGGGAACCCGCCATCACGGACTGGTGGAGAGGCCATC < 41bp 0.7663116692118 0.523333504524138 0.9211576 0.8886306 prediction 0.485956329375324 Functional Loss - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91136912 chr15:91136915 synonymous SNV . 0 24 hm5C_associated_SNPs_67920 0 0 3 PPIG POSTAR2 ENCODE chr15:91136872-91136989
64251 chr7 111846793 111846793 1 + G T LUSC 111846790 + 111846770 111846810 41 TAATGGCTGCTTCCAAGACCCAGGGGGCTGTCGCCCGAATG TAATGGCTGCTTCCAAGACCCAGTGGGCTGTCGCCCGAATG < 41bp 0.917246914738909 0.674275736741195 0.9120259 0.092861444 prediction 0.485942355995428 Functional Loss - ZNF277 ENSG00000198839 CDS Human protein_coding chr7:111846790 chr7:111846793 nonsynonymous SNV 0.035 3 24 hm5C_associated_SNPs_67922 0 0 5 DDX3X POSTAR2 ENCODE chr7:111846761-111846848
64251 chr17 7468005 7468005 1 + G T LGG 7468003 + 7467983 7468023 41 TCTGGGCCAGAAGGGGAGCGCAGCTTGGCACCCCCTGATGC TCTGGGCCAGAAGGGGAGCGCATCTTGGCACCCCCTGATGC < 41bp 0.742970327427483 0.408461008772724 0.33993223 0.21822134 prediction 0.485940654854966 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7468003 chr17:7468005 nonsynonymous SNV 0.966 1 23 hm5C_associated_SNPs_67923 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7467950-7468008
64251 chr19 52090212 52090212 1 + G T COAD 52090209 + 52090189 52090229 41 CAGAAAGTTTGAAGCTGAACCTAGAAGTGAACGGTCAGAAT CAGAAAGTTTGAAGCTGAACCTATAAGTGAACGGTCAGAAT < 41bp 0.742960706792401 0.37057015516964 0.059878945 0.0703125 prediction 0.485921413584801 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090209 chr19:52090212 stopgain 0.939 0 24 hm5C_associated_SNPs_67926 0 0 1 RBM15 POSTAR2 ENCODE chr19:52090178-52090230
64251 chr19 14829359 14829359 1 + C T UCEC 14829357 + 14829337 14829377 41 GGGCAAGCCTTCAAATATTCCTCGAATCTCCGGCGACACAT GGGCAAGCCTTCAAATATTCCTTGAATCTCCGGCGACACAT < 41bp 0.831762091753853 0.588811080102425 0.5263387 0.061820626 prediction 0.485902023302855 Functional Loss - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14829357 chr19:14829359 nonsynonymous SNV 0.057 3 23 hm5C_associated_SNPs_67928 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14829348-14829371
64251 chr7 30876318 30876318 1 + C T SKCM 30876316 + 30876296 30876336 41 AAGGGAAGAGGTCATCCTGTCGCCAGTCCCATCAGTGCTCA AAGGGAAGAGGTCATCCTGTCGTCAGTCCCATCAGTGCTCA < 41bp 0.841144610993839 0.598200659723227 0.40337998 0.28311664 prediction 0.485887902541223 Functional Loss - MINDY4 ENSG00000106125 CDS Human protein_coding chr7:30876316 chr7:30876318 nonsynonymous SNV 0.035 1 23 hm5C_associated_SNPs_67930 0 0 1 UCHL5 POSTAR2 ENCODE chr7:30876273-30876365
64251 chr17 52991175 52991175 1 + G T CESC 52991172 + 52991152 52991192 41 TCAAAGAAGTATACCTCGACCTGGTTAAGAAAGGCGTTCAG TCAAAGAAGTATACCTCGACCTGTTTAAGAAAGGCGTTCAG < 41bp 0.742939598467105 0.365397384717522 0.20244008 0.285877 prediction 0.48587919693421 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52991172 chr17:52991175 nonsynonymous SNV 0.981 0 24 hm5C_associated_SNPs_67934 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr17:52991153-52991180
64251 chr12 120899902 120899902 1 - G A CESC 120899904 - 120899884 120899924 41 CAGCTATGGCTACTCACGGTCTCGGTCTGGGTCAAGGGGCC CAGCTATGGCTACTCACGGTCTTGGTCTGGGTCAAGGGGCC < 41bp 0.742939223740298 0.470332527625571 0.024737835 0.052161694 prediction 0.485878447480596 Functional Loss - SRSF9 ENSG00000111786 CDS Human protein_coding chr12:120899904 chr12:120899902 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_67935 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:120899806-120899926
64251 chr2 62449850 62449850 1 + G T COAD 62449847 + 62449827 62449867 41 AGGCAAGCAATCCGGGAATCCTGGGGCCAAGAAAGCAACGC AGGCAAGCAATCCGGGAATCCTGTGGCCAAGAAAGCAACGC < 41bp 0.915477518636438 0.672541628021861 0.9002851 0.43355647 prediction 0.485871781229154 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449847 chr2:62449850 nonsynonymous SNV 0.958 5 24 hm5C_associated_SNPs_67936 0 0 5 FMR1 POSTAR2 ENCODE chr2:62449836-62449914
64251 chr19 13056800 13056800 1 + A C LIHC 13056796 + 13056776 13056816 41 TCACGCTCAAAACGCTGCAGCAGCAGACCTTCAAGATCCGC TCACGCTCAAAACGCTGCAGCAGCCGACCTTCAAGATCCGC < 41bp 0.742933891066171 0.3540136926394 0.27345207 0.2183735 prediction 0.485867782132342 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13056796 chr19:13056800 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_67937 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13056680-13056800
64251 chr20 46251037 46251037 1 + C T STAD 46251035 + 46251015 46251055 41 GGATCCACTGGCCAGTGATTCACGAAAACGCAAATTGCCAT GGATCCACTGGCCAGTGATTCATGAAAACGCAAATTGCCAT < 41bp 0.742928995078988 0.459552392229086 0.54925466 0.4147997 prediction 0.485857990157976 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46251035 chr20:46251037 stopgain 0.970 1 23 hm5C_associated_SNPs_67939 0 0 3 DDX24 POSTAR2 ENCODE chr20:46250993-46251064
64251 chr11 237137 237137 1 + A T LUSC 237133 + 237113 237153 41 TGGCACCGTCTGGAGGAGCTCTACACGAAGAAGTGAGCGCC TGGCACCGTCTGGAGGAGCTCTACTCGAAGAAGTGAGCGCC < 41bp 0.877409768461036 0.634493885170937 0.876593 0.14859158 prediction 0.485831766580198 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:237133 chr11:237137 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_67943 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:237100-237139
64251 chr1 44441472 44441472 1 + G T HNSC 44441469 + 44441449 44441489 41 CTTTTTCTCCCTCACTGCTGCAGGAGTCTGCTACACCATTT CTTTTTCTCCCTCACTGCTGCAGTAGTCTGCTACACCATTT < 41bp 0.742914436961032 0.474343137346615 0.8886091 0.21355817 prediction 0.485828873922064 Functional Loss - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44441469 chr1:44441472 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_67945 0 0 12 DDX3X POSTAR2 ENCODE chr1:44441471-44441485
64251 chr1 109242479 109242479 1 + G T LUAD 109242477 + 109242457 109242497 41 AAAAAACGGGAACATAGTCCCAGCAAAGAAAAATCTAGAAA AAAAAACGGGAACATAGTCCCATCAAAGAAAAATCTAGAAA < 41bp 0.742907807222111 0.437059813974241 0.10021323 0.06460151 prediction 0.485815614444222 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109242477 chr1:109242479 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_67949 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:109242457-109242587
64251 chr1 22853229 22853229 1 + G C rs2281353 22853225 + 22853205 22853245 41 GTGGGATGGGAGCTGGTGACCAGGGTACCCCAGGAGGCATG GTGGGATGGGAGCTGGTGACCAGGCTACCCCAGGAGGCATG < 41bp 0.848689850281304 0.605784056029069 0.89120245 0.791018 prediction 0.48581158850447 Functional Loss - ZBTB40 ENSG00000184677 UTR3 Human protein_coding chr1:22853225 chr1:22853229 . . 0 25 hm5C_associated_SNPs_67950 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:22853198-22853229
64251 chr17 33319679 33319679 1 + G T LUAD 33319676 + 33319656 33319696 41 AGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGACACCT AGAGACGAGCTCTGAGCGTCCAGTCCTCGCTGATGACACCT < 41bp 0.742898636372207 0.341643651369053 0.34709257 0.13783151 prediction 0.485797272744415 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33319676 chr17:33319679 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_67952 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:33319666-33319704
64251 chr20 37524334 37524334 1 + G A LUSC 37524331 + 37524311 37524351 41 CCACCTGCGGCCACATCAACCTGGTGAAGATCCTCGTTCAG CCACCTGCGGCCACATCAACCTGATGAAGATCCTCGTTCAG < 41bp 0.743482833665922 0.5005979538096 0.38638306 0.26816127 prediction 0.485769759712644 Functional Loss - PPP1R16B ENSG00000101445 CDS Human protein_coding chr20:37524331 chr20:37524334 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_67956 0 0 1 YBX3 POSTAR2 ENCODE chr20:37524261-37524337
64251 chr11 66613413 66613413 1 + A C KIRP 66613412 + 66613392 66613432 41 TTGCGCGGCCTTGGAGCACCCACAGAGGCGGCCCCTGCTGG TTGCGCGGCCTTGGAGCACCCCCAGAGGCGGCCCCTGCTGG < 41bp 0.773173285173338 0.53030066833279 0.3922964 0.77874696 prediction 0.485745233681096 Functional Loss - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66613412 chr11:66613413 synonymous SNV . 0 22 hm5C_associated_SNPs_67960 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:66613405-66613456
64251 chr22 29708221 29708221 1 + G A STAD 29708218 + 29708198 29708238 41 GGCCAATGGGCTGCCTGGGCCCCGAAGCCAAGCCCTTTCCA GGCCAATGGGCTGCCTGGGCCCCAAAGCCAAGCCCTTTCCA < 41bp 0.742871182814772 0.499150348876958 0.09259987 0.022916555 prediction 0.485742365629544 Functional Loss - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29708218 chr22:29708221 nonsynonymous SNV 0.953 2 24 hm5C_associated_SNPs_67961 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:29708054-29708228
64251 chr4 4861753 4861753 1 + A C rs565664559 4861752 + 4861732 4861772 41 GCCGCGGCCACGGCAGCCGCCATGGGCGCGGACGAGGAGGG GCCGCGGCCACGGCAGCCGCCCTGGGCGCGGACGAGGAGGG < 41bp 0.752892767388483 0.510029792856482 0.8842237 0.28604615 prediction 0.485725949064002 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4861752 chr4:4861753 nonsynonymous SNV 0.720 1 22 hm5C_associated_SNPs_67965 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr4:4861752-4861753
64251 chr19 38899412 38899412 1 + G A SKCM 38899409 + 38899389 38899429 41 AGGTGCTTATGGGCAACGTTCCAGACCGGGGGGGCCGCCCA AGGTGCTTATGGGCAACGTTCCAAACCGGGGGGGCCGCCCA < 41bp 0.74562476082076 0.50276326810411 0.09963438 0.106119156 prediction 0.485722985433301 Functional Loss - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38899409 chr19:38899412 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_67966 0 0 2 UCHL5 POSTAR2 ENCODE chr19:38899392-38899455
64251 chr2 74783592 74783592 1 + G C BRCA 74783588 + 74783568 74783608 41 CCGGACAGGGGCACGATGTTCTCAGAGCTGACTCCCATGAA CCGGACAGGGGCACGATGTTCTCACAGCTGACTCCCATGAA < 41bp 0.742856132533658 0.441905602879091 0.088903636 0.13367185 prediction 0.485712265067317 Functional Loss - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74783588 chr2:74783592 nonsynonymous SNV 0.644 0 25 hm5C_associated_SNPs_67968 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74783585-74783615
64251 chr17 78086425 78086425 1 + G A GBM 78086422 + 78086402 78086442 41 CGCCCATTTGTGATCTCCCGCTCGACCTTTGCTGGCCACGG CGCCCATTTGTGATCTCCCGCTCAACCTTTGCTGGCCACGG < 41bp 0.742855015873088 0.499689473285319 0.044078857 0.05846286 prediction 0.485710031746176 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78086422 chr17:78086425 synonymous SNV . 0 24 hm5C_associated_SNPs_67969 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:78086409-78086444
64251 chr17 73008954 73008954 1 + C T GBM 73008952 + 73008932 73008972 41 GAATCTCAGGGCTCGGACACCGCCTGGAGGGTCCCGGTGAG GAATCTCAGGGCTCGGACACCGTCTGGAGGGTCCCGGTGAG < 41bp 0.770363034956908 0.527514467090237 0.51247936 0.5670944 prediction 0.485697135733342 Functional Loss - MRPL58 ENSG00000167862 CDS Human protein_coding chr17:73008952 chr17:73008954 nonsynonymous SNV 0.992 0 23 hm5C_associated_SNPs_67972 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73008947-73008972
64251 chr1 220969991 220969991 1 + C T ESCA 220969989 + 220969969 220970009 41 CCTGCTACCCCTGCAGAGTGCACGGCCTGGAGATAGAGGGC CCTGCTACCCCTGCAGAGTGCATGGCCTGGAGATAGAGGGC < 41bp 0.788149023098256 0.545304395509013 0.3272102 0.28984055 prediction 0.485689255178485 Functional Loss - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220969989 chr1:220969991 synonymous SNV . 0 23 hm5C_associated_SNPs_67975 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:220969984-220970013
64251 chr4 69692179 69692179 1 + C T UCEC 69692177 + 69692157 69692197 41 AGATGCCTTAGGTCTCAATACTCGACTGTACAAGTGGATAC AGATGCCTTAGGTCTCAATACTTGACTGTACAAGTGGATAC < 41bp 0.837594674998992 0.594760398672447 0.4442406 0.17592433 prediction 0.48566855265309 Functional Loss - UGT2B10 ENSG00000109181 CDS Human protein_coding chr4:69692177 chr4:69692179 stopgain 0.282 0 23 hm5C_associated_SNPs_67979 0 0 1 SND1 POSTAR2 ENCODE chr4:69692161-69692196
64251 chr7 101183303 101183303 1 + C T UCEC 101183301 + 101183281 101183321 41 CCCTCTTGCTCACCCTGTGCCACGACAGAGAAGGCCCACGG CCCTCTTGCTCACCCTGTGCCATGACAGAGAAGGCCCACGG < 41bp 0.787684949072421 0.544853683519541 0.027534842 0.030347377 prediction 0.485662531105761 Functional Loss - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101183301 chr7:101183303 stopgain 0.274 0 23 hm5C_associated_SNPs_67981 0 0 1 SND1 POSTAR2 ENCODE chr7:101183303-101183330
64251 chr8 145235403 145235403 1 + C T rs145624802 145235401 + 145235381 145235421 41 CTGGGCGTGGCCAAGCAGGACACGGTGCGCGTGGCCTTCTG CTGGGCGTGGCCAAGCAGGACATGGTGCGCGTGGCCTTCTG < 41bp 0.742828994659007 0.499767403198474 0.32887238 0.39368793 prediction 0.485657989318013 Functional Loss - MROH1 ENSG00000179832 CDS Human protein_coding chr8:145235401 chr8:145235403 nonsynonymous SNV 0.010 2 23 hm5C_associated_SNPs_67983 0 0 2 EIF3D POSTAR2 ENCODE chr8:145235342-145235412
64251 chr10 14880394 14880394 1 + G T rs45622935 14880392 + 14880372 14880412 41 CATTCCTGCCGCTGCCGTCCCTGCTGCCTCATGGCGGCCAT CATTCCTGCCGCTGCCGTCCCTTCTGCCTCATGGCGGCCAT < 41bp 0.7428233400328 0.413009829607903 0.35888013 0.08658719 prediction 0.485646680065601 Functional Loss - HSPA14 ENSG00000187522 UTR5 Human protein_coding chr10:14880392 chr10:14880394 . . 0 23 hm5C_associated_SNPs_67985 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:14880320-14880400
64251 chr1 207242835 207242835 1 + G T COAD 207242832 + 207242812 207242852 41 ACCCAGAAGAGTTTGCACTTCGAGATCAAGAGAAGTATCTG ACCCAGAAGAGTTTGCACTTCGATATCAAGAGAAGTATCTG < 41bp 0.742821697497085 0.356484465560218 0.25408316 0.08031595 prediction 0.48564339499417 Functional Loss - PFKFB2 ENSG00000123836 CDS Human protein_coding chr1:207242832 chr1:207242835 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_67987 0 0 3 DDX24 POSTAR2 ENCODE chr1:207242796-207242871
64251 chr19 50385510 50385510 1 + G A SKCM 50385507 + 50385487 50385527 41 CCTCGTCCCCAGCGCTTCCTCCAGGATCCCTACTCCACCAC CCTCGTCCCCAGCGCTTCCTCCAAGATCCCTACTCCACCAC < 41bp 0.764798390992343 0.521987825031857 0.917359 0.7817093 prediction 0.485621131920973 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385507 chr19:50385510 synonymous SNV . 0 24 hm5C_associated_SNPs_67991 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50385506-50385538
64251 chr3 58111396 58111396 1 + T C BLCA 58111395 + 58111375 58111415 41 CACTGAAGGCTGCCAGCCATCTAGGGTGCAAGCCCAAGGAC CACTGAAGGCTGCCAGCCATCCAGGGTGCAAGCCCAAGGAC < 41bp 0.742810483561513 0.495280446821573 0.8492143 0.922546 prediction 0.485620967123027 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58111395 chr3:58111396 synonymous SNV . 0 22 hm5C_associated_SNPs_67992 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:58111396-58111424
64251 chr16 28883644 28883644 1 + C T HNSC 28883642 + 28883622 28883662 41 TGACTGGCGGCACTGGCTCCCACGGTGTCTTCCTGGTGCGC TGACTGGCGGCACTGGCTCCCATGGTGTCTTCCTGGTGCGC < 41bp 0.742803025424123 0.483398317369696 0.81214356 0.43052527 prediction 0.485606050848245 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883642 chr16:28883644 synonymous SNV . 0 23 hm5C_associated_SNPs_67993 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:28883603-28883653
64251 chr20 39729874 39729874 1 + C T SKCM 39729872 + 39729852 39729892 41 TGCCAAGGTTCCTTCTCCTCCTCCAGGACATAAGTGGAAAG TGCCAAGGTTCCTTCTCCTCCTTCAGGACATAAGTGGAAAG < 41bp 0.742800609899471 0.428953198818663 0.9251303 0.14416638 prediction 0.485601219798942 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39729872 chr20:39729874 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_67995 0 0 17 FMR1 POSTAR2 GSE39682,GSM977616 chr20:39729851-39729874
64251 chr9 140137532 140137532 1 + G A UCEC 140137529 + 140137509 140137549 41 AGTACCGGGCGCTGACCGTGCCCGAGCTCACCCAGCAGATG AGTACCGGGCGCTGACCGTGCCCAAGCTCACCCAGCAGATG < 41bp 0.751050934108246 0.508251909843827 0.25953913 0.1566864 prediction 0.485598048528837 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137529 chr9:140137532 nonsynonymous SNV 0.613 2 24 hm5C_associated_SNPs_67996 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137480-140137540
64251 chr4 39184169 39184169 1 + A C rs60800612 39184165 + 39184145 39184185 41 CTTCATAGTTCGCGTAGCGGCTCGAGCGTGGAGATGAAGGT CTTCATAGTTCGCGTAGCGGCTCGCGCGTGGAGATGAAGGT < 41bp 0.74277240321297 0.46602027471628 0.1692782 0.06992176 prediction 0.48554480642594 Functional Loss - WDR19 ENSG00000157796 UTR5 Human protein_coding chr4:39184165 chr4:39184169 . . 0 25 hm5C_associated_SNPs_68007 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:39184161-39184180
64251 chr7 150732998 150732998 1 + G T LUAD 150732995 + 150732975 150733015 41 AGGGCAATGGGCGTAGCAGACGAGGCCCTGGGCAATGTGCG AGGGCAATGGGCGTAGCAGACGATGCCCTGGGCAATGTGCG < 41bp 0.742765184158562 0.335182843014551 0.8663863 0.31004673 prediction 0.485530368317125 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150732995 chr7:150732998 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_68011 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150732968-150733016
64251 chrX 47101018 47101018 1 + G A UCEC 47101015 + 47100995 47101035 41 AGGAGCTGCTGTCATTCCTCCTGGACGGGCTGCATGAGGAC AGGAGCTGCTGTCATTCCTCCTGAACGGGCTGCATGAGGAC < 41bp 0.75910343339731 0.516339095157749 0.4878462 0.25214207 prediction 0.485528676479123 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101015 chrX:47101018 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_68012 0 0 15 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47100994-47101037
64251 chr1 201974754 201974754 1 + C T rs145130543 201974752 + 201974732 201974772 41 GCAGTGAGGTGGCCCAGACCCTCGCCAAGGAGACTTTTGCA GCAGTGAGGTGGCCCAGACCCTTGCCAAGGAGACTTTTGCA < 41bp 0.742761493878284 0.474624677834451 0.30908954 0.08123374 prediction 0.485522987756568 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201974752 chr1:201974754 synonymous SNV . 0 23 hm5C_associated_SNPs_68013 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:201974724-201974757
64251 chr19 11465369 11465369 1 + C T UCEC 11465367 + 11465347 11465387 41 CAAGAGCGGCCGCTCCTTCCCACCCGGTGCAGATCCTCCCC CAAGAGCGGCCGCTCCTTCCCATCCGGTGCAGATCCTCCCC < 41bp 0.753783845274841 0.511030220530646 0.18529448 0.0656949 prediction 0.485507249488391 Functional Loss - CCDC159 ENSG00000183401 CDS Human protein_coding chr19:11465367 chr19:11465369 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_68017 0 0 1 HNRNPK POSTAR2 ENCODE chr19:11465369-11465452
64251 chr11 117060969 117060969 1 + C T CESC 117060967 + 117060947 117060987 41 TCCTGCAACGGGAGATCAACCACAACCGGGCCCTGCTGCGC TCCTGCAACGGGAGATCAACCATAACCGGGCCCTGCTGCGC < 41bp 0.815130893129241 0.572380597978491 0.033396542 0.04113975 prediction 0.485500590301501 Functional Loss - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117060967 chr11:117060969 synonymous SNV . 0 23 hm5C_associated_SNPs_68018 0 0 7 BUD13 POSTAR2 ENCODE chr11:117060935-117061001
64251 chr5 169506014 169506014 1 + G T UCEC 169506011 + 169505991 169506031 41 ATTAGCATCACCCAAGACGCCGAGAGTGGAGCAGGAGGAAC ATTAGCATCACCCAAGACGCCGATAGTGGAGCAGGAGGAAC < 41bp 0.74274127120746 0.383743620993931 0.47404215 0.33194542 prediction 0.485482542414921 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169506011 chr5:169506014 nonsynonymous SNV 0.027 0 24 hm5C_associated_SNPs_68022 0 0 1 FXR2 POSTAR2 ENCODE chr5:169506000-169506079
64251 chr19 30935951 30935951 1 + C T LUAD 30935949 + 30935929 30935969 41 CCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCC CCCTCCTGGGATGCCTCAATCTTGTGCCGCCGCTGAAATCC < 41bp 0.802040206274166 0.55929942346517 0.839221 0.3866529 prediction 0.485481565617993 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935949 chr19:30935951 synonymous SNV . 0 23 hm5C_associated_SNPs_68023 0 0 2 FUS POSTAR2 SRX029328 chr19:30935924-30935952
64251 chrX 100646028 100646028 1 + A C STAD 100646027 + 100646007 100646047 41 CCGCGCCGATAGCGCTCACGCAAGCATGGTAGGACTTGCTG CCGCGCCGATAGCGCTCACGCCAGCATGGTAGGACTTGCTG < 41bp 0.74274017565223 0.487666676469207 0.40893373 0.23317769 prediction 0.48548035130446 Functional Loss - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646027 chrX:100646028 synonymous SNV . 0 22 hm5C_associated_SNPs_68024 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:100645997-100646036
64251 chr10 54074383 54074383 1 + G A STAD 54074380 + 54074360 54074400 41 CCAGGCTCTGCAGTCAGCGCCGCGCCGGGAATCCTGTACCC CCAGGCTCTGCAGTCAGCGCCGCACCGGGAATCCTGTACCC < 41bp 0.747669024657392 0.5049550802671 0.7006676 0.32533976 prediction 0.485427888780584 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074380 chr10:54074383 synonymous SNV . 0 24 hm5C_associated_SNPs_68033 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074360-54074400
64251 chr1 219384958 219384958 1 + C T GBM 219384956 + 219384936 219384976 41 TTAAAATCTCTAGGAGTGACCACGAAGTTTCATAGTTTTCC TTAAAATCTCTAGGAGTGACCATGAAGTTTCATAGTTTTCC < 41bp 0.742712190169566 0.478730754655745 0.029007643 0.052557677 prediction 0.485424380339132 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219384956 chr1:219384958 nonsynonymous SNV 0.148 1 23 hm5C_associated_SNPs_68035 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:219384935-219384959
64251 chr12 132241092 132241092 1 + G A COAD 132241089 + 132241069 132241109 41 AGTGATGCTGGGGAGGATGGCGCGCCTGAAGACGCAGCCGA AGTGATGCTGGGGAGGATGGCGCACCTGAAGACGCAGCCGA < 41bp 0.755570518520236 0.51286609274667 0.82477105 0.7000546 prediction 0.485408851547133 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132241089 chr12:132241092 synonymous SNV . 0 24 hm5C_associated_SNPs_68036 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:132241068-132241096
64251 chr7 44841646 44841646 1 + A C rs11984372 44841645 + 44841625 44841665 41 TGTTCACAGATCTTGTGTCTCAAAGGTAGGCAGAGGCAGGA TGTTCACAGATCTTGTGTCTCCAAGGTAGGCAGAGGCAGGA < 41bp 0.785248743558479 0.542547550164206 0.5504594 0.80785036 prediction 0.485402386788545 Functional Loss - PPIA ENSG00000196262 UTR3 Human protein_coding chr7:44841645 chr7:44841646 . . 0 22 hm5C_associated_SNPs_68039 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:44841639-44841669
64251 chr11 65486093 65486093 1 + G T UCEC 65486091 + 65486071 65486111 41 CTCCAAAGTGGAAGGGAAAACAGGGACCCCTGAGAAGCCCC CTCCAAAGTGGAAGGGAAAACATGGACCCCTGAGAAGCCCC < 41bp 0.893093576620245 0.650399907043636 0.8092827 0.31767923 prediction 0.485387339153219 Functional Loss - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65486091 chr11:65486093 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_68041 0 0 1 BUD13 POSTAR2 ENCODE chr11:65486063-65486103
64251 chr9 35846541 35846541 1 + G A rs76908268 35846538 + 35846518 35846558 41 TCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGCAA TCCCCATGCGTGGACGACTGCGGACCCTACGGCCAGTGCAA < 41bp 0.742688785502027 0.489541789531478 0.90964305 0.26919872 prediction 0.485377571004053 Functional Loss - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35846538 chr9:35846541 synonymous SNV . 0 24 hm5C_associated_SNPs_68042 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35846525-35846569
64251 chr1 228363254 228363254 1 + G C rs531800130 228363250 + 228363230 228363270 41 GGCGCAGGCTGATGGGGAGGCTGGGGCCTGGGGCCTTTGGC GGCGCAGGCTGATGGGGAGGCTGGCGCCTGGGGCCTTTGGC < 41bp 0.837251438048428 0.594564909205348 0.93273365 0.9188195 prediction 0.485373057686161 Functional Loss - IBA57 ENSG00000181873 UTR3 Human protein_coding chr1:228363250 chr1:228363254 . . 0 25 hm5C_associated_SNPs_68043 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:228363249-228363275
64251 chr4 6925365 6925365 1 + G A PRAD 6925362 + 6925342 6925382 41 CCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAA CCGGAGCCTGTACCCTGCAGCGCAGTCCACGTGAGGAGGAA < 41bp 0.75340416135039 0.510723471720888 0.3530851 0.19582832 prediction 0.485361379259005 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925362 chr4:6925365 synonymous SNV . 0 24 hm5C_associated_SNPs_68046 0 0 1 EIF3H POSTAR2 ENCODE chr4:6925359-6925419
64251 chr1 206566173 206566173 1 + G A BLCA 206566170 + 206566150 206566190 41 GCAGGAGGACCGGCAGACCCCACGCTCCCCTGACTCCACGG GCAGGAGGACCGGCAGACCCCACACTCCCCTGACTCCACGG < 41bp 0.746033469658153 0.50336493616414 0.33344978 0.28482813 prediction 0.485337066988027 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566170 chr1:206566173 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_68052 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206566170-206566192
64251 chr12 105553810 105553810 1 + C T UCEC 105553808 + 105553788 105553828 41 TTCAGTCCTCAGTGATCACACACGAAATTCTGCCGAAGGCA TTCAGTCCTCAGTGATCACACATGAAATTCTGCCGAAGGCA < 41bp 0.74266034065224 0.469570272728418 0.19947863 0.49351242 prediction 0.48532068130448 Functional Loss - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105553808 chr12:105553810 stopgain 1.000 1 23 hm5C_associated_SNPs_68053 0 0 1 PPIG POSTAR2 ENCODE chr12:105553791-105553828
64251 chr4 184182419 184182419 1 + C T UCEC 184182417 + 184182397 184182437 41 AAGTCTGTGGCCTCCCTGTCCTCGAGGTCCTCCCTTTCCTC AAGTCTGTGGCCTCCCTGTCCTTGAGGTCCTCCCTTTCCTC < 41bp 0.827918527445832 0.585260832752941 0.17179862 0.04265821 prediction 0.485315389385783 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184182417 chr4:184182419 nonsynonymous SNV 0.988 3 23 hm5C_associated_SNPs_68054 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:184182414-184182441
64251 chr19 17431362 17431362 1 + G T rs76045424 17431359 + 17431339 17431379 41 CCATGGTGCCAAGGATGGAGCGGGGTCAGCCCCCTGCCTGG CCATGGTGCCAAGGATGGAGCGGTGTCAGCCCCCTGCCTGG < 41bp 0.900145724206111 0.657491565264992 0.93046093 0.851609 prediction 0.485308317882239 Functional Loss - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17431359 chr19:17431362 . . 0 24 hm5C_associated_SNPs_68056 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:17431322-17431380
64251 chr19 19638159 19638159 1 + G T LUAD 19638157 + 19638137 19638177 41 TGTTACAGGCAGAAACCGACCGGAGGTAGCACCGCAGGGGC TGTTACAGGCAGAAACCGACCGTAGGTAGCACCGCAGGGGC < 41bp 0.897742741963077 0.655098064366372 0.8601225 0.22015622 prediction 0.48528935519341 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19638157 chr19:19638159 synonymous SNV . 0 23 hm5C_associated_SNPs_68057 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:19638159-19638160
64251 chr11 608234 608234 1 + G T LUAD 608232 + 608212 608252 41 GAGAGGAGCCCACAGAGAGCCAGGGCCTGGCTGCCCGGCTG GAGAGGAGCCCACAGAGAGCCATGGCCTGGCTGCCCGGCTG < 41bp 0.897943855935927 0.655304627831759 0.9307396 0.8393926 prediction 0.485278456208335 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608232 chr11:608234 nonsynonymous SNV 0.017 1 23 hm5C_associated_SNPs_68061 0 0 1 FMR1 POSTAR2 ENCODE chr11:608233-608284
64251 chr17 8167859 8167859 1 + G T UCEC 8167857 + 8167837 8167877 41 CCCCAGGGCTGAGCGTGCACCAGGCTCTGGAGAGGGTTCTG CCCCAGGGCTGAGCGTGCACCATGCTCTGGAGAGGGTTCTG < 41bp 0.7426298694645 0.381490324849364 0.4789782 0.070825934 prediction 0.485259738929001 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167857 chr17:8167859 nonsynonymous SNV 0.188 1 23 hm5C_associated_SNPs_68069 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:8167831-8167865
64251 chr10 115438980 115438980 1 + G C rs551872764 115438976 + 115438956 115438996 41 TCCACCAGCAAGCTGGGCTGCTGGGTGGGTACTTCCTTCAA TCCACCAGCAAGCTGGGCTGCTGGCTGGGTACTTCCTTCAA < 41bp 0.838900270614797 0.596291119120804 0.85519445 0.36214417 prediction 0.485218302987985 Functional Loss - CASP7 ENSG00000165806 UTR5 Human protein_coding chr10:115438976 chr10:115438980 . . 0 25 hm5C_associated_SNPs_68075 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:115438972-115438998
64251 chrX 19375832 19375832 1 + A C STAD 19375828 + 19375808 19375848 41 CGGACACAGTATGAGTGACCCTGGAGTCAGGTACGCTCATG CGGACACAGTATGAGTGACCCTGGCGTCAGGTACGCTCATG < 41bp 0.92903189430862 0.686428106777633 0.21027815 0.25711226 prediction 0.485207575061974 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19375828 chrX:19375832 synonymous SNV . 0 25 hm5C_associated_SNPs_68078 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:19375776-19375833
64251 chr12 102542066 102542066 1 + T C UCEC 102542065 + 102542045 102542085 41 TATTGACATGGAAATACTTGCTCCATGAGAAATTGAACTTA TATTGACATGGAAATACTTGCCCCATGAGAAATTGAACTTA < 41bp 0.762402235280123 0.519811236062126 0.9284493 0.23426163 prediction 0.485181998435993 Functional Loss - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102542065 chr12:102542066 nonsynonymous SNV 0.949 3 22 hm5C_associated_SNPs_68084 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:102542033-102542077
64251 chr12 110353251 110353251 1 + A C STAD 110353247 + 110353227 110353267 41 AGGCATGGGAAGCAGACCAGCAGGAGGAGGAGGAAGAGGAG AGGCATGGGAAGCAGACCAGCAGGCGGAGGAGGAAGAGGAG < 41bp 0.925295472424857 0.682705719350358 0.88630426 0.8772714 prediction 0.485179506148997 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110353247 chr12:110353251 nonsynonymous SNV 0.987 0 25 hm5C_associated_SNPs_68085 0 0 4 BUD13 POSTAR2 ENCODE chr12:110353208-110353327
64251 chr13 113975922 113975922 1 + G C UCEC 113975918 + 113975898 113975938 41 TCCCTGCGAGCGCTGCAGGCCACAGTCGGCAATTCCTACAA TCCCTGCGAGCGCTGCAGGCCACACTCGGCAATTCCTACAA < 41bp 0.742577797680125 0.457202217501378 0.027018338 0.0033216476 prediction 0.485155595360249 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113975918 chr13:113975922 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_68088 0 0 8 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr13:113975916-113975939
64251 chr10 70968663 70968663 1 + C T SKCM 70968661 + 70968641 70968681 41 GGTGCAGCAAGGACTCCTCACTCCAGACATGCTGAAACAGC GGTGCAGCAAGGACTCCTCACTTCAGACATGCTGAAACAGC < 41bp 0.833510451749644 0.590933005591754 0.9408319 0.07093945 prediction 0.48515489231578 Functional Loss - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968661 chr10:70968663 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_68089 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:70968637-70968668
64251 chr1 2237542 2237542 1 + G A rs146789646 2237539 + 2237519 2237559 41 CGTAACCTGCGGAAGGAGATCGAGCGTCTCCGCGCCGAGAA CGTAACCTGCGGAAGGAGATCGAACGTCTCCGCGCCGAGAA < 41bp 0.754194829649244 0.511620398338513 0.89494634 0.4171709 prediction 0.485148862621461 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2237539 chr1:2237542 synonymous SNV . 0 24 hm5C_associated_SNPs_68093 2 0 2 SRSF1 POSTAR2 GSE83923,GSM2221663 chr1:2237540-2237560
64251 chr17 42636197 42636197 1 + G T ESCA 42636195 + 42636175 42636215 41 CCTGGCCGCCTGGGCCGTGCCGGCCGTCAAGACCATCACCA CCTGGCCGCCTGGGCCGTGCCGTCCGTCAAGACCATCACCA < 41bp 0.742572389024934 0.401360570602798 0.30947194 0.09266481 prediction 0.485144778049868 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636195 chr17:42636197 nonsynonymous SNV 0.990 4 23 hm5C_associated_SNPs_68094 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42636166-42636219
64251 chr1 118483785 118483785 1 + G T LAML 118483783 + 118483763 118483803 41 GAAAAGCTGGTTCCATAATGCGGGAAGGAAGAGACAGAGTT GAAAAGCTGGTTCCATAATGCGTGAAGGAAGAGACAGAGTT < 41bp 0.873496866773338 0.630934541161279 0.2801777 0.06923589 prediction 0.485124651224119 Functional Loss - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118483783 chr1:118483785 synonymous SNV . 0 23 hm5C_associated_SNPs_68098 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:118483766-118483791
64251 chr9 140137745 140137745 1 + C T CESC 140137743 + 140137723 140137763 41 GGCTGTCTGTGACATCCCACCTCGGGGGCTAAAAATGTCCG GGCTGTCTGTGACATCCCACCTTGGGGGCTAAAAATGTCCG < 41bp 0.794257374624586 0.551698059753472 0.18168929 0.087393016 prediction 0.485118629742228 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137743 chr9:140137745 nonsynonymous SNV 0.974 3 23 hm5C_associated_SNPs_68101 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr9:140137717-140137746
64251 chr3 12623650 12623650 1 + G T SKCM 12623647 + 12623627 12623667 41 GTGCGGCTCTGGGATTTCATCGAGAACCGAGAAAGCCGGCA GTGCGGCTCTGGGATTTCATCGATAACCGAGAAAGCCGGCA < 41bp 0.913971820544585 0.671417545098921 0.8521633 0.27823085 prediction 0.485108550891329 Functional Loss - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12623647 chr3:12623650 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_68102 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:12623619-12623653
64251 chr6 7559514 7559514 1 + C T BLCA 7559512 + 7559492 7559532 41 TTATAAAGCCATCAGTGTCCCTCGAGTCCGCAGGGCCAGCT TTATAAAGCCATCAGTGTCCCTTGAGTCCGCAGGGCCAGCT < 41bp 0.828379056407998 0.585828349330583 0.36260703 0.12992877 prediction 0.485101414154829 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7559512 chr6:7559514 stopgain 0.997 1 23 hm5C_associated_SNPs_68103 3 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7559494-7559515
64251 chr12 51450271 51450271 1 + C T BLCA 51450269 + 51450249 51450289 41 GGGGATTGGCCAGCTGACTGCTCAGGAAGTAAAATCGGTAA GGGGATTGGCCAGCTGACTGCTTAGGAAGTAAAATCGGTAA < 41bp 0.742549162052027 0.474148127060246 0.3141235 0.27032483 prediction 0.485098324104055 Functional Loss - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51450269 chr12:51450271 stopgain 0.923 0 23 hm5C_associated_SNPs_68104 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:51450224-51450274
64251 chr17 27014467 27014467 1 + G A GBM 27014464 + 27014444 27014484 41 GTATGTTTGTGGCCTGGGACCTCGGAAAGGGACCCACCTCC GTATGTTTGTGGCCTGGGACCTCAGAAAGGGACCCACCTCC < 41bp 0.745673189210977 0.503126789885922 0.3627631 0.09505594 prediction 0.48509279865011 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27014464 chr17:27014467 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_68105 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr17:27014445-27014468
64251 chr12 56214131 56214131 1 + G C STAD 56214127 + 56214107 56214147 41 ATTGCTAAGTGTACTGCTGCCGAAGTTGCCCCAGTTCCATG ATTGCTAAGTGTACTGCTGCCGAACTTGCCCCAGTTCCATG < 41bp 0.742542265823021 0.468305836960366 0.3305838 0.06989375 prediction 0.485084531646042 Functional Loss - ORMDL2 ENSG00000123353;ENSG00000257390 CDS Human other chr12:56214127 chr12:56214131 nonsynonymous SNV 0.990 2 25 hm5C_associated_SNPs_68106 0 0 1 SND1 POSTAR2 ENCODE chr12:56214130-56214204
64251 chr9 71395143 71395143 1 + G C HNSC 71395142 + 71395122 71395162 41 GGGTACGGGCGGGAGCCCGGCGGAGGGCGGTGGCAGCGGCG GGGTACGGGCGGGAGCCCGGCCGAGGGCGGTGGCAGCGGCG < 41bp 0.841184172077587 0.598651461803745 0.85629404 0.7236739 prediction 0.485065420547686 Functional Loss - FAM122A ENSG00000187866 CDS Human protein_coding chr9:71395142 chr9:71395143 synonymous SNV . 0 22 hm5C_associated_SNPs_68109 0 0 1 SRSF9 POSTAR2 ENCODE chr9:71395096-71395186
64251 chr6 147525724 147525724 1 + C T SKCM 147525722 + 147525702 147525742 41 GGCCTGACCGCCGGCTCGTCCTCGGCGTCGCAGCAGCAACA GGCCTGACCGCCGGCTCGTCCTTGGCGTCGCAGCAGCAACA < 41bp 0.768531232076487 0.526008291724901 0.44464675 0.089835405 prediction 0.485045880703172 Functional Loss - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147525722 chr6:147525724 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_68113 0 0 4 BUD13 POSTAR2 ENCODE chr6:147525673-147525733
64251 chr1 26156151 26156151 1 + A C SKCM 26156150 + 26156130 26156170 41 GGTGGAGGTCCCTGAGCTTCCATCAGTCCCCCTGCTTTGTT GGTGGAGGTCCCTGAGCTTCCCTCAGTCCCCCTGCTTTGTT < 41bp 0.742501334749716 0.493516661151375 0.41542763 0.24914184 prediction 0.485002669499432 Functional Loss - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26156150 chr1:26156151 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_68119 0 0 1 PPIG POSTAR2 ENCODE chr1:26156092-26156157
64251 chrX 30237553 30237553 1 + A T PAAD 30237549 + 30237529 30237569 41 AGAGCCTATGCTGAAACCAGCAAGATGAAAGTCCTGGAGTT AGAGCCTATGCTGAAACCAGCAAGTTGAAAGTCCTGGAGTT < 41bp 0.845299993970436 0.602807771586004 0.8976866 0.86043286 prediction 0.484984444768863 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30237549 chrX:30237553 nonsynonymous SNV 0.947 2 25 hm5C_associated_SNPs_68120 0 0 1 LIN28B POSTAR2 ENCODE chrX:30237494-30237556
64251 chr20 2097588 2097588 1 + G T HNSC 2097585 + 2097565 2097605 41 TGGACTAAGCAAGGTCTGTGCTGGGCTGGCACCCCGAGGCA TGGACTAAGCAAGGTCTGTGCTGTGCTGGCACCCCGAGGCA < 41bp 0.742489907252855 0.338937165934511 0.7407771 0.3726489 prediction 0.48497981450571 Functional Loss - STK35 ENSG00000125834 CDS Human protein_coding chr20:2097585 chr20:2097588 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_68121 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:2097550-2097606
64251 chr12 64173835 64173835 1 + G C LUAD 64173831 + 64173811 64173851 41 CCTACCACGTCTTCTTCGGGCGCCGCCGCCAGGCGCCGGCC CCTACCACGTCTTCTTCGGGCGCCCCCGCCAGGCGCCGGCC < 41bp 0.829215088908446 0.586729843788157 0.25926322 0.091873914 prediction 0.484970490240578 Functional Loss - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173831 chr12:64173835 nonsynonymous SNV 0.882 2 25 hm5C_associated_SNPs_68124 0 0 1 DDX3X POSTAR2 ENCODE chr12:64173807-64173911
64251 chr14 39650827 39650827 1 + G T LUSC 39650824 + 39650804 39650844 41 AGTAGAAGTCGGAGTAGGGGCCGGGGACATAATAGAGATAG AGTAGAAGTCGGAGTAGGGGCCGTGGACATAATAGAGATAG < 41bp 0.74246358564036 0.357451241753702 0.59993064 0.21233836 prediction 0.484927171280719 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39650824 chr14:39650827 synonymous SNV . 0 24 hm5C_associated_SNPs_68133 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr8 123964007 123964007 1 + C T SKCM 123964005 + 123963985 123964025 41 GAGTGCAAATACTGCCCCTACTCCACGCAAAACCTGAACGA GAGTGCAAATACTGCCCCTACTTCACGCAAAACCTGAACGA < 41bp 0.742463185913746 0.443102627345309 0.9130128 0.10173845 prediction 0.484926371827492 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964005 chr8:123964007 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_68134 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:123963989-123964011
64251 chr11 61536759 61536759 1 + G A UCEC 61536756 + 61536736 61536776 41 CTGCCGGACTCTCCCCCAGACTCGGGCTCCGAGGCCTACTC CTGCCGGACTCTCCCCCAGACTCAGGCTCCGAGGCCTACTC < 41bp 0.743604434050601 0.501150364984011 0.6119041 0.32258317 prediction 0.484908138133181 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61536756 chr11:61536759 synonymous SNV . 0 24 hm5C_associated_SNPs_68137 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61536732-61536794
64251 chr1 156849035 156849035 1 + G T LUSC 156849033 + 156849013 156849053 41 TGCGGGGATGGTGTACCTGGCGGGTCTGCATTTTGTGCACC TGCGGGGATGGTGTACCTGGCGTGTCTGCATTTTGTGCACC < 41bp 0.742453911145828 0.384670226111286 0.7223494 0.26139677 prediction 0.484907822291656 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156849033 chr1:156849035 nonsynonymous SNV 0.938 3 23 hm5C_associated_SNPs_68138 0 0 1 RBM15 POSTAR2 ENCODE chr1:156849035-156849077
64251 chr20 43042402 43042402 1 + A T BRCA 43042398 + 43042378 43042418 41 TATGAGGACAGCAGCCTGCCCTCCATCAATGCGCTCCTGCA TATGAGGACAGCAGCCTGCCCTCCTTCAATGCGCTCCTGCA < 41bp 0.742448255743922 0.388088837177882 0.9591664 0.14281139 prediction 0.484896511487845 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43042398 chr20:43042402 nonsynonymous SNV 0.976 3 25 hm5C_associated_SNPs_68139 0 0 3 BUD13 POSTAR2 ENCODE chr20:43042400-43042421
64251 chr2 27728588 27728588 1 + G A SKCM 27728585 + 27728565 27728605 41 GGGTGTCTTCACCTCTTCAGCCCGAGGGTCTCAGCGGCTCC GGGTGTCTTCACCTCTTCAGCCCAAGGGTCTCAGCGGCTCC < 41bp 0.752011462345348 0.509567357775507 0.17356527 0.11035481 prediction 0.484888209139683 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27728585 chr2:27728588 nonsynonymous SNV 0.545 5 24 hm5C_associated_SNPs_68140 0 0 4 QKI POSTAR2 ENCODE chr2:27728503-27728622
64251 chr11 994111 994111 1 + G T SKCM 994108 + 994088 994128 41 AGATGCCCCCATTCCCGGAGCGGGAGTCCTCCATCTTGGCA AGATGCCCCCATTCCCGGAGCGGTAGTCCTCCATCTTGGCA < 41bp 0.742436888192087 0.335203536810697 0.9376018 0.53212446 prediction 0.484873776384175 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:994108 chr11:994111 stopgain 0.813 1 24 hm5C_associated_SNPs_68142 0 0 8 BUD13 POSTAR2 ENCODE chr11:994057-994117
64251 chr1 249211642 249211642 1 + G C LUAD 249211638 + 249211618 249211658 41 CGGGGGTCCAAGCAGCTGCACAGGGGGAAGCCTGTGCGACT CGGGGGTCCAAGCAGCTGCACAGGCGGAAGCCTGTGCGACT < 41bp 0.834480929759986 0.592050687035197 0.92836857 0.89328694 prediction 0.484860485449577 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211638 chr1:249211642 nonsynonymous SNV 0.010 3 25 hm5C_associated_SNPs_68143 0 0 4 RBM15 POSTAR2 ENCODE chr1:249211604-249211644
64251 chr8 61496823 61496823 1 + A C UCEC 61496819 + 61496799 61496839 41 GTCGTATTACAGAGGTGCAGCAGGAGCTTTACTAGTTTACG GTCGTATTACAGAGGTGCAGCAGGCGCTTTACTAGTTTACG < 41bp 0.742425181700587 0.342653851483269 0.30854678 0.30924475 prediction 0.484850363401174 Functional Loss - RAB2A ENSG00000104388 CDS Human protein_coding chr8:61496819 chr8:61496823 synonymous SNV . 0 25 hm5C_associated_SNPs_68147 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:61496807-61496825
64251 chr19 36278344 36278344 1 + G A UCEC 36278341 + 36278321 36278361 41 CCTCCCAACTCCCTAGCACACCCGGGTGCCTGGGTCCCGGG CCTCCCAACTCCCTAGCACACCCAGGTGCCTGGGTCCCGGG < 41bp 0.742596233639929 0.500172207797958 0.8996438 0.17580318 prediction 0.484848051683941 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278341 chr19:36278344 synonymous SNV . 0 24 hm5C_associated_SNPs_68149 0 0 3 HNRNPK POSTAR2 ENCODE chr19:36278274-36278353
64251 chr9 133574728 133574728 1 + G T LAML 133574726 + 133574706 133574746 41 TGTATTTCAGAGGAGAAGATCTGCAGAAGATGAGCTTGCAA TGTATTTCAGAGGAGAAGATCTTCAGAAGATGAGCTTGCAA < 41bp 0.742424023233075 0.418646810944047 0.4973089 0.77667 prediction 0.484848046466151 Functional Loss - EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133574726 chr9:133574728 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68150 0 0 22 ZC3H7B POSTAR2 GSE38201,GSM936510 chr9:133574689-133574731
64251 chr5 908535 908535 1 + C T HNSC 908533 + 908513 908553 41 CCGAGCCATCAGATGCCATCCGCGTGGTCAATGCTGTCTTG CCGAGCCATCAGATGCCATCCGTGTGGTCAATGCTGTCTTG < 41bp 0.82188448351303 0.579460919789963 0.5005399 0.24254203 prediction 0.484847127446135 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:908533 chr5:908535 synonymous SNV . 0 23 hm5C_associated_SNPs_68151 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:908515-908545
64251 chr11 111856033 111856033 1 + C T rs34966520 111856031 + 111856011 111856051 41 TCTGTGAACCAGGTGTCAATCCCGAGGAACAACTGGTGAGC TCTGTGAACCAGGTGTCAATCCTGAGGAACAACTGGTGAGC < 41bp 0.836071679179457 0.593666359741409 0.38513595 0.2372478 prediction 0.484810638876096 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111856031 chr11:111856033 synonymous SNV . 0 23 hm5C_associated_SNPs_68155 0 0 1 BUD13 POSTAR2 ENCODE chr11:111855945-111856046
64251 chr2 238671875 238671875 1 + G T UCEC 238671873 + 238671853 238671893 41 CGAAGAAGAGGGTGAAGAAACAGGATTAAGGGACGAGAAAC CGAAGAAGAGGGTGAAGAAACATGATTAAGGGACGAGAAAC < 41bp 0.871401285029348 0.628996076330673 0.87296724 0.35753185 prediction 0.484810417397349 Functional Loss - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238671873 chr2:238671875 stopgain 0.001 0 23 hm5C_associated_SNPs_68156 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:238671848-238671884
64251 chr20 33464492 33464492 1 + G T LUAD 33464490 + 33464470 33464510 41 GTCCGGAGCGGCAGCGGGAGCCGGGGCCAGGAGGAAGCTGG GTCCGGAGCGGCAGCGGGAGCCTGGGCCAGGAGGAAGCTGG < 41bp 0.899062805528681 0.6566911918977 0.9270284 0.9124112 prediction 0.484743227261961 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33464490 chr20:33464492 nonsynonymous SNV 0.039 0 23 hm5C_associated_SNPs_68169 0 0 8 DDX3X POSTAR2 ENCODE chr20:33464387-33464628
64251 chr10 5493825 5493825 1 + T C BLCA 5493824 + 5493804 5493844 41 TAAAAGAGTTCGACCTCTGGCTCGTGTCACGTCCTTGGCAA TAAAAGAGTTCGACCTCTGGCCCGTGTCACGTCCTTGGCAA < 41bp 0.763258560751999 0.520889820375951 0.050006628 0.02218169 prediction 0.484737480752097 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5493824 chr10:5493825 synonymous SNV . 0 22 hm5C_associated_SNPs_68171 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5493804-5493834
64251 chr7 5331432 5331432 1 + C T SKCM 5331430 + 5331410 5331450 41 ATCAACCTGGCCGCTGTGGGCACCGTGGCCTTCGGCTGCAC ATCAACCTGGCCGCTGTGGGCATCGTGGCCTTCGGCTGCAC < 41bp 0.742368234911531 0.484794053349995 0.29955637 0.32186374 prediction 0.484736469823062 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5331430 chr7:5331432 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_68172 0 0 2 BUD13 POSTAR2 ENCODE chr7:5331360-5331460
64251 chr9 82323121 82323121 1 + G T LUSC 82323118 + 82323098 82323138 41 CCCAGGCAGTAACTCTACTCCCGGATTGAGGCCTGTACCTG CCCAGGCAGTAACTCTACTCCCGTATTGAGGCCTGTACCTG < 41bp 0.74235945071635 0.474575940164026 0.20675126 0.07430434 prediction 0.484718901432699 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82323118 chr9:82323121 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_68175 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:82323090-82323145
64251 chr1 44132198 44132198 1 + T C LIHC 44132197 + 44132177 44132217 41 CCCTGATTTCCCCGTTAATGCTGAAGAAATATGGAATTCCC CCCTGATTTCCCCGTTAATGCCGAAGAAATATGGAATTCCC < 41bp 0.742343414537302 0.49294094124247 0.05158356 0.07122314 prediction 0.484686829074605 Functional Loss - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44132197 chr1:44132198 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_68180 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44132146-44132224
64251 chr16 70507040 70507040 1 + G A rs17881069 70507037 + 70507017 70507057 41 AGGATGGGGGCGAGGCCCTGCGAGCCTGGCGGGCCTCCTGG AGGATGGGGGCGAGGCCCTGCGAACCTGGCGGGCCTCCTGG < 41bp 0.742342732028563 0.488261440370796 0.91409683 0.8659181 prediction 0.484685464057125 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70507037 chr16:70507040 nonsynonymous SNV 0.970 0 24 hm5C_associated_SNPs_68181 0 0 4 BUD13 POSTAR2 ENCODE chr16:70507000-70507052
64251 chr16 89789017 89789017 1 + C T HNSC 89789015 + 89788995 89789035 41 TCGAGAAGCCTGCGCAGCATCTCCGAGAGGGCGCCTGGAGC TCGAGAAGCCTGCGCAGCATCTTCGAGAGGGCGCCTGGAGC < 41bp 0.742339612651108 0.473335727324709 0.3886223 0.052532136 prediction 0.484679225302216 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789015 chr16:89789017 nonsynonymous SNV 0.007 0 23 hm5C_associated_SNPs_68182 0 0 6 BUD13 POSTAR2 ENCODE chr16:89789007-89789064
64251 chr20 61460288 61460288 1 + G C BRCA 61460287 + 61460267 61460307 41 CCTCACAGGGAGAGGCTGGTCGCAACGGTGCTCCGGGAGAG CCTCACAGGGAGAGGCTGGTCCCAACGGTGCTCCGGGAGAG < 41bp 0.856846126391065 0.614507370708247 0.7513495 0.39795962 prediction 0.484677511365635 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61460287 chr20:61460288 nonsynonymous SNV 0.247 2 22 hm5C_associated_SNPs_68183 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:61460218-61460293
64251 chr7 75615261 75615261 1 + C T UCEC 75615259 + 75615239 75615279 41 AGGCAAGGAGGTGGGGGAGACGCTGCTGTACTACGGCTGCC AGGCAAGGAGGTGGGGGAGACGTTGCTGTACTACGGCTGCC < 41bp 0.747348701792772 0.505011619062457 0.6821212 0.78872824 prediction 0.484674165460632 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75615259 chr7:75615261 synonymous SNV . 0 23 hm5C_associated_SNPs_68185 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:75615260-75615283
64251 chr19 47646764 47646764 1 + C T BLCA 47646762 + 47646742 47646782 41 GTCTTACAGGCTGCGGGCCTCTCGGGTGCTTCTTGTCGGCT GTCTTACAGGCTGCGGGCCTCTTGGGTGCTTCTTGTCGGCT < 41bp 0.742330360189238 0.467196072620879 0.5007591 0.34954464 prediction 0.484660720378476 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47646762 chr19:47646764 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_68187 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:47646752-47646781
64251 chr14 93119266 93119266 1 + G A LUSC 93119263 + 93119243 93119283 41 GGCAGCCTGGTGCAGGACTACAAGGTGTACAGCCTGGAGAT GGCAGCCTGGTGCAGGACTACAAAGTGTACAGCCTGGAGAT < 41bp 0.742330001566165 0.492878716151794 0.8155551 0.5462187 prediction 0.48466000313233 Functional Loss - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93119263 chr14:93119266 synonymous SNV . 0 24 hm5C_associated_SNPs_68188 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:93119248-93119286
64251 chr10 7780691 7780691 1 + G T UCEC 7780688 + 7780668 7780708 41 TGGCACAAGGATCTCAGGTGCTAGAGTCCACGCCACCCCCA TGGCACAAGGATCTCAGGTGCTATAGTCCACGCCACCCCCA < 41bp 0.919122790810205 0.676794590224431 0.3938974 0.1943799 prediction 0.484656401171548 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7780688 chr10:7780691 stopgain 0.071 0 24 hm5C_associated_SNPs_68189 0 0 5 LIN28B POSTAR2 ENCODE chr10:7780669-7780714
64251 chr11 65827474 65827474 1 + G T UCEC 65827472 + 65827452 65827492 41 AGGAGATGCGAGAGGCCCTGCAGGAGAAGGTGAGGGCCTGG AGGAGATGCGAGAGGCCCTGCATGAGAAGGTGAGGGCCTGG < 41bp 0.893367941826687 0.651045373317878 0.8403581 0.33041367 prediction 0.484645137017619 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827472 chr11:65827474 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68192 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:65827451-65827477
64251 chr20 57766164 57766164 1 + G T UCEC 57766162 + 57766142 57766182 41 CTCCAGGGGCCCCAGGTGGCCAGGCCTCACCTCACCTGACC CTCCAGGGGCCCCAGGTGGCCATGCCTCACCTCACCTGACC < 41bp 0.742311583973992 0.395044147823296 0.9175619 0.70814705 prediction 0.484623167947983 Functional Loss - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57766162 chr20:57766164 nonsynonymous SNV 0.961 2 23 hm5C_associated_SNPs_68196 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:57766160-57766180
64251 chr10 5960424 5960424 1 + G A UCEC 5960421 + 5960401 5960441 41 TGTTCACAGTGCCCCACACCCACGTCTTCTATCTCACGCAG TGTTCACAGTGCCCCACACCCACATCTTCTATCTCACGCAG < 41bp 0.754821973177016 0.512534805501591 0.12927115 0.031867802 prediction 0.48457433535085 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5960421 chr10:5960424 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_68205 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:5960412-5960438
64251 chr17 38249553 38249553 1 + G T UCEC 38249551 + 38249531 38249571 41 GCGGTCTGTGGGGAAGACGACAGCAGTGAGGCGGACTCCCC GCGGTCTGTGGGGAAGACGACATCAGTGAGGCGGACTCCCC < 41bp 0.890709216271523 0.648423491401739 0.5863258 0.2527611 prediction 0.484571449739568 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38249551 chr17:38249553 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_68207 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:38249509-38249554
64251 chr1 170513942 170513942 1 + C T rs35872826 170513940 + 170513920 170513960 41 TGTCAGCTGACATTGGAATTCTCAGGAACCGGATTGATCAG TGTCAGCTGACATTGGAATTCTTAGGAACCGGATTGATCAG < 41bp 0.828991377117078 0.586712563451909 0.23671734 0.302123 prediction 0.484557627330338 Functional Loss - GORAB ENSG00000120370 CDS Human protein_coding chr1:170513940 chr1:170513942 synonymous SNV . 0 23 hm5C_associated_SNPs_68210 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:170513938-170513968
64251 chr1 27674319 27674319 1 + G A rs191472571 27674316 + 27674296 27674336 41 CAGGAGACCAGGCTCCAGGCCACGACAGGGAGGCTGAGGCT CAGGAGACCAGGCTCCAGGCCACAACAGGGAGGCTGAGGCT < 41bp 0.763169591074063 0.520890861087661 0.2634579 0.2598217 prediction 0.484557459972804 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27674316 chr1:27674319 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_68211 0 0 2 PPIG POSTAR2 ENCODE chr1:27674296-27674373
64251 chr6 160819069 160819069 1 + T C BLCA 160819068 + 160819048 160819088 41 TCACCCAAGCCATCCTGAACCTCGGCTTCCTGACTGGAGCA TCACCCAAGCCATCCTGAACCCCGGCTTCCTGACTGGAGCA < 41bp 0.785164882319332 0.542899306331084 0.3219378 0.22401303 prediction 0.484531151976495 Functional Loss - SLC22A3 ENSG00000146477 CDS Human protein_coding chr6:160819068 chr6:160819069 nonsynonymous SNV 0.965 3 22 hm5C_associated_SNPs_68216 0 0 3 BUD13 POSTAR2 ENCODE chr6:160819006-160819097
64251 chr12 58114203 58114203 1 + A C OV 58114202 + 58114182 58114222 41 TTTCCAGGGAAAATTGAGATCAAAATTGTCCGCCCATGGGC TTTCCAGGGAAAATTGAGATCCAAATTGTCCGCCCATGGGC < 41bp 0.77187075754904 0.529608289722814 0.0484522 0.02038762 prediction 0.484524935652451 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58114202 chr12:58114203 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_68219 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:58114192-58114252
64251 chr20 37657133 37657133 1 + G T UCEC 37657130 + 37657110 37657150 41 TGCAGCGAGGTTTCATTCTACTGGAGCTTATAGGTAACATG TGCAGCGAGGTTTCATTCTACTGTAGCTTATAGGTAACATG < 41bp 0.74225940550657 0.355506344999929 0.027859807 0.015813887 prediction 0.484518811013141 Functional Loss - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37657130 chr20:37657133 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_68221 0 0 1 PRPF8 POSTAR2 ENCODE chr20:37657133-37657169
64251 chr17 48457722 48457722 1 + G C rs77309724 48457718 + 48457698 48457738 41 TCCTTCTGTCTGGAGAGTGACTGGGCTGGAGGGGTGAAGGT TCCTTCTGTCTGGAGAGTGACTGGCCTGGAGGGGTGAAGGT < 41bp 0.825209420667312 0.582950964432348 0.834501 0.2737962 prediction 0.484516912469928 Functional Loss - EME1 ENSG00000154920 CDS Human protein_coding chr17:48457718 chr17:48457722 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_68222 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:48457716-48457740
64251 chr2 54856786 54856786 1 + C T COAD 54856784 + 54856764 54856804 41 TAAGGAGGTGGCAGAGCTGACGCGGCTGCGGAAGCAGGCAC TAAGGAGGTGGCAGAGCTGACGTGGCTGCGGAAGCAGGCAC < 41bp 0.759132622842271 0.516886428397333 0.8822615 0.8948661 prediction 0.484492388889876 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856784 chr2:54856786 nonsynonymous SNV 0.967 4 23 hm5C_associated_SNPs_68226 0 0 14 AGGF1 POSTAR2 ENCODE chr2:54856750-54856810
64251 chr5 65088371 65088371 1 + C T SKCM 65088369 + 65088349 65088389 41 GGATGATGGCAGTGGCTGCCCTCGTGGTGAACTTCTCACAG GGATGATGGCAGTGGCTGCCCTTGTGGTGAACTTCTCACAG < 41bp 0.829531529965659 0.587287983109355 0.073569566 0.083344966 prediction 0.484487093712606 Functional Loss - NLN ENSG00000123213 CDS Human protein_coding chr5:65088369 chr5:65088371 synonymous SNV . 0 23 hm5C_associated_SNPs_68228 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:65088366-65088389
64251 chr17 21094457 21094457 1 + G T UCEC 21094454 + 21094434 21094474 41 GCCAGAAAAGAGCGGAAATCCAAGAACTCCTAGTACTCTGA GCCAGAAAAGAGCGGAAATCCAATAACTCCTAGTACTCTGA < 41bp 0.912802777488333 0.670559260346215 0.28111905 0.058717966 prediction 0.484487034284236 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21094454 chr17:21094457 nonsynonymous SNV 0.813 5 24 hm5C_associated_SNPs_68229 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr17:21094439-21094464
64251 chr6 105526426 105526426 1 + C T DLBC 105526424 + 105526404 105526444 41 AAAAATGTTGCACAGCCACCCGCGAGTTCTCAGGGAAGACA AAAAATGTTGCACAGCCACCCGTGAGTTCTCAGGGAAGACA < 41bp 0.801342407524901 0.559099843236309 0.25135028 0.14543435 prediction 0.484485128577184 Functional Loss - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105526424 chr6:105526426 nonsynonymous SNV 0.242 0 23 hm5C_associated_SNPs_68230 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:105526357-105526436
64251 chr17 76219685 76219685 1 + G C rs17885521 76219681 + 76219661 76219701 41 CCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGC CCAGAGTGGCTGCACCACTTCCAGCGTTTATTCCCTGGTGC < 41bp 0.742231276017996 0.455034679360675 0.6158887 0.3259269 prediction 0.484462552035992 Functional Loss - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76219681 chr17:76219685 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_68231 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76219591-76219873
64251 chr17 76219684 76219684 1 + G T UCEC 76219681 + 76219661 76219701 41 CCAGAGTGGCTGCACCACTTCCAGGGTTTATTCCCTGGTGC CCAGAGTGGCTGCACCACTTCCATGGTTTATTCCCTGGTGC < 41bp 0.742231276017996 0.348989781520185 0.6158887 0.38214463 prediction 0.484462552035992 Functional Loss - BIRC5 ENSG00000089685;ENSG00000268310 CDS Human other chr17:76219681 chr17:76219684 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_68232 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76219591-76219873
64251 chr12 119563191 119563191 1 + G A UCEC 119563188 + 119563168 119563208 41 CCTTCTCATCCCCCCAAGATCTCGAAGCCGGCCCCGAAAGT CCTTCTCATCCCCCCAAGATCTCAAAGCCGGCCCCGAAAGT < 41bp 0.748725932603787 0.506509174347245 0.796677 0.07953739 prediction 0.484433516513085 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119563188 chr12:119563191 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_68236 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119563180-119563260
64251 chr17 48559584 48559584 1 + C T STAD 48559582 + 48559562 48559602 41 CTTGATGCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGC CTTGATGCTGGGGCTGCCGGCATAGCAGGTGGGGCCGTGGC < 41bp 0.742204934435263 0.481590274879887 0.1719864 0.24648374 prediction 0.484409868870526 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48559582 chr17:48559584 stopgain 0.180 1 23 hm5C_associated_SNPs_68240 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:48559558-48559595
64251 chr4 159750334 159750334 1 + G A SKCM 159750331 + 159750311 159750351 41 CATCTCTTCCCACAGTTCTTCTGGGGGATCTTCACATCATG CATCTCTTCCCACAGTTCTTCTGAGGGATCTTCACATCATG < 41bp 0.742202167917946 0.495700642826461 0.808538 0.3418203 prediction 0.484404335835892 Functional Loss - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159750331 chr4:159750334 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_68241 0 0 3 GRWD1 POSTAR2 ENCODE chr4:159750302-159750397
64251 chr9 2039784 2039784 1 + A C rs145170448 2039783 + 2039763 2039803 41 AACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAG AACAGCAGCAGCAACAGCAGCCGCAGCAGCAGCAGCAGCAG < 41bp 0.742190110104503 0.490550195515826 0.25562102 0.13193995 prediction 0.484380220209006 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2039783 chr9:2039784 nonsynonymous SNV 0.712 0 22 hm5C_associated_SNPs_68247 0 0 2 RBM15 POSTAR2 ENCODE chr9:2039728-2039789
64251 chr16 2812478 2812478 1 + G A BLCA 2812475 + 2812455 2812495 41 GAGAAGTGGCAGGTCACGCTCTAGAACCCCAGCTAGACGTG GAGAAGTGGCAGGTCACGCTCTAAAACCCCAGCTAGACGTG < 41bp 0.744625093452151 0.502445806939268 0.7164712 0.46492112 prediction 0.484358573025764 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812475 chr16:2812478 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_68252 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2812281-2812483
64251 chr19 17875207 17875207 1 + C T SKCM 17875205 + 17875185 17875225 41 GCCACCATCGAGGAGACCTACTCGAAGGCGATGGCGAAACT GCCACCATCGAGGAGACCTACTTGAAGGCGATGGCGAAACT < 41bp 0.847964048582719 0.605797832062843 0.94413614 0.42213538 prediction 0.484332433039752 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17875205 chr19:17875207 nonsynonymous SNV 0.974 3 23 hm5C_associated_SNPs_68255 0 0 3 DDX24 POSTAR2 ENCODE chr19:17875183-17875216
64251 chr1 235600748 235600748 1 + A T LUAD 235600744 + 235600724 235600764 41 GCAGAGACGGCGCGACTACTCATTATCGCCAGCATTGGCCA GCAGAGACGGCGCGACTACTCATTTTCGCCAGCATTGGCCA < 41bp 0.742163557726254 0.409557652108925 0.028695226 0.035726905 prediction 0.484327115452508 Functional Loss - TBCE ENSG00000116957 CDS Human protein_coding chr1:235600744 chr1:235600748 nonsynonymous SNV 0.003 4 25 hm5C_associated_SNPs_68257 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:235600722-235600754
64251 chr2 220371039 220371039 1 + G T LUSC 220371036 + 220371016 220371056 41 GCACCGTGGGACGCTGGGCCCGCGTGGAGGGTACCCCCAGT GCACCGTGGGACGCTGGGCCCGCTTGGAGGGTACCCCCAGT < 41bp 0.91952918351683 0.677372765065833 0.5509057 0.032027215 prediction 0.484312836901993 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220371036 chr2:220371039 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_68261 0 0 1 RPS3 POSTAR2 ENCODE chr2:220371039-220371111
64251 chr12 117188112 117188112 1 + G A HNSC 117188109 + 117188089 117188129 41 AACTGTGCTTTCAGCATAAGCTCGGTGAGTTCTGGGGGCAT AACTGTGCTTTCAGCATAAGCTCAGTGAGTTCTGGGGGCAT < 41bp 0.760133484014512 0.517980054010023 0.24135718 0.20631638 prediction 0.484306860008977 Functional Loss - RNFT2 ENSG00000135119 CDS Human protein_coding chr12:117188109 chr12:117188112 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_68264 0 0 1 PPIG POSTAR2 ENCODE chr12:117188035-117188113
64251 chr1 11808504 11808504 1 + G T UCEC 11808502 + 11808482 11808522 41 GCTTGCTGGCCACCATCTTCCTGGACATCGTGCACATCAGC GCTTGCTGGCCACCATCTTCCTTGACATCGTGCACATCAGC < 41bp 0.89225754369845 0.650105432869426 0.20595193 0.064162225 prediction 0.484304221658046 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808502 chr1:11808504 stopgain 0.995 0 23 hm5C_associated_SNPs_68265 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:11808490-11808511
64251 chr19 14674476 14674476 1 + A T HNSC 14674472 + 14674452 14674492 41 GCCCTGTTCTCCCCGCAGATCCGCAGTGGTACCCCGCCCGC GCCCTGTTCTCCCCGCAGATCCGCTGTGGTACCCCGCCCGC < 41bp 0.876001064340785 0.633853747988332 0.37101918 0.4127203 prediction 0.484294632704907 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14674472 chr19:14674476 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_68267 0 0 3 DDX24 POSTAR2 ENCODE chr19:14674461-14674514
64251 chr1 15988127 15988127 1 + G T LUAD 15988125 + 15988105 15988145 41 TCCGTGCTGGCTTTACTTTGCAGGAAGCTCTTGGAGCTTTG TCCGTGCTGGCTTTACTTTGCATGAAGCTCTTGGAGCTTTG < 41bp 0.868353759725776 0.626216823504701 0.6088291 0.20676032 prediction 0.48427387244215 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15988125 chr1:15988127 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68273 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:15988106-15988142
64251 chr11 86518768 86518768 1 + G T SKCM 86518766 + 86518746 86518786 41 GTGAGCCCTTACAGTGCCCCCTGGAAACCCACTTGGCCTGC GTGAGCCCTTACAGTGCCCCCTTGAAACCCACTTGGCCTGC < 41bp 0.880883003287133 0.638748009566991 0.35150093 0.08517623 prediction 0.484269987440284 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86518766 chr11:86518768 nonsynonymous SNV 0.940 0 23 hm5C_associated_SNPs_68275 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:86518761-86518785
64251 chrX 152113846 152113846 1 + C T UCEC 152113844 + 152113824 152113864 41 TATGAGGGGAAGGATGTGGCCACCAGGGTCGGAGAGGCCTG TATGAGGGGAAGGATGTGGCCATCAGGGTCGGAGAGGCCTG < 41bp 0.799586559002299 0.55745195681542 0.5726651 0.56421083 prediction 0.484269204373758 Functional Loss - ZNF185 ENSG00000147394 CDS Human protein_coding chrX:152113844 chrX:152113846 nonsynonymous SNV 0.005 1 23 hm5C_associated_SNPs_68276 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:152113827-152113849
64251 chr10 81109426 81109426 1 + T C UCEC 81109425 + 81109405 81109445 41 TCTCTTCGACCCTCAGAGAACTTCAGAGCCCTGTGCACTGG TCTCTTCGACCCTCAGAGAACCTCAGAGCCCTGTGCACTGG < 41bp 0.742107859860335 0.475200162574377 0.3170505 0.22247404 prediction 0.484215719720671 Functional Loss - PPIF ENSG00000108179 CDS Human protein_coding chr10:81109425 chr10:81109426 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_68284 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:81109420-81109440
64251 chr12 132241033 132241033 1 + G A LUSC 132241030 + 132241010 132241050 41 ATCTCTAGGCTGTGTCTGCACCAGAAGAGGCTCCCACAGAC ATCTCTAGGCTGTGTCTGCACCAAAAGAGGCTCCCACAGAC < 41bp 0.742102293883854 0.494627674522662 0.27353802 0.14873299 prediction 0.484204587767708 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132241030 chr12:132241033 nonsynonymous SNV 0.225 2 24 hm5C_associated_SNPs_68290 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:132241008-132241045
64251 chrX 47040965 47040965 1 + G A COAD 47040962 + 47040942 47040982 41 TGTCGATGCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTGCT TGTCGATGCAGGCTTTCTCTCGCACCCAGCCTGGTGCTGCT < 41bp 0.754711478641433 0.512612483016812 0.8856449 0.70557183 prediction 0.484197991249241 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47040962 chrX:47040965 nonsynonymous SNV 0.472 3 24 hm5C_associated_SNPs_68294 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47040923-47040967
64251 chr1 55527111 55527111 1 + G A UCEC 55527108 + 55527088 55527128 41 CAAGCCGCCTGTGCTGAGGCCACGAGGTCAGCCCAACCAGT CAAGCCGCCTGTGCTGAGGCCACAAGGTCAGCCCAACCAGT < 41bp 0.742093405868108 0.490666277379155 0.5720568 0.68908215 prediction 0.484186811736216 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55527108 chr1:55527111 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_68296 0 0 5 HNRNPC POSTAR2 SRX1438577 chr1:55527107-55527163
64251 chr7 148486869 148486869 1 + C T UCEC 148486867 + 148486847 148486887 41 TTCAGCATTCAAGTGCTGAGCTCCGGGTCCTGGCCCTTCCA TTCAGCATTCAAGTGCTGAGCTTCGGGTCCTGGCCCTTCCA < 41bp 0.742077871443409 0.457141759996921 0.26420552 0.16374663 prediction 0.484155742886817 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148486867 chr7:148486869 nonsynonymous SNV 0.225 4 23 hm5C_associated_SNPs_68305 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:148486856-148486886
64251 chr11 8008914 8008914 1 + G C LUAD 8008913 + 8008893 8008933 41 CGACAAGATGGCCACACCGGCGGTACCAGTAAGTGCTCCTC CGACAAGATGGCCACACCGGCCGTACCAGTAAGTGCTCCTC < 41bp 0.742067763996017 0.43134400388059 0.24670431 0.04700902 prediction 0.484135527992034 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8008913 chr11:8008914 synonymous SNV . 0 22 hm5C_associated_SNPs_68308 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:8008900-8008920
64251 chr21 45732051 45732051 1 + G T SARC 45732049 + 45732029 45732069 41 CACCAGGGAGGGGCGCCGGGCAGCGGCCTACAACCTGGTCC CACCAGGGAGGGGCGCCGGGCATCGGCCTACAACCTGGTCC < 41bp 0.742067216116952 0.390489883180063 0.73856884 0.5804213 prediction 0.484134432233905 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45732049 chr21:45732051 nonsynonymous SNV 0.789 3 23 hm5C_associated_SNPs_68309 0 0 5 METAP2 POSTAR2 ENCODE chr21:45732005-45732064
64251 chrX 48681417 48681417 1 + C T UCEC 48681415 + 48681395 48681435 41 GTTAGCTGAGCGGATGACCACACGAGAAAAGAAGGTTCTGG GTTAGCTGAGCGGATGACCACATGAGAAAAGAAGGTTCTGG < 41bp 0.78300512027903 0.540953148398989 0.51369834 0.54608 prediction 0.484103943760081 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681415 chrX:48681417 stopgain 0.036 0 23 hm5C_associated_SNPs_68313 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:48681386-48681438
64251 chr14 105958612 105958612 1 + G A SKCM 105958609 + 105958589 105958629 41 CGAGCAGATGCTGGCCCAGGCCCGAGTGCCTCTGGGTGACG CGAGCAGATGCTGGCCCAGGCCCAAGTGCCTCTGGGTGACG < 41bp 0.755355651109601 0.513306994001325 0.27422622 0.13263527 prediction 0.484097314216551 Functional Loss - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958609 chr14:105958612 nonsynonymous SNV 0.012 1 24 hm5C_associated_SNPs_68315 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr14:105958612-105958634
64251 chr19 39899177 39899177 1 + T C rs17885410 39899176 + 39899156 39899196 41 TGGCCTGGTTCGGACCCCCTCTGTACAGTCCCTGGGATCCG TGGCCTGGTTCGGACCCCCTCCGTACAGTCCCTGGGATCCG < 41bp 0.751070094892591 0.509025065670582 0.037162006 0.047541767 prediction 0.484090058444019 Functional Loss - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899176 chr19:39899177 synonymous SNV . 0 22 hm5C_associated_SNPs_68317 0 0 5 DDX59 POSTAR2 ENCODE chr19:39899175-39899221
64251 chr16 2578332 2578332 1 + G A STAD 2578329 + 2578309 2578349 41 TATGGGATGATTGCAGATGGCACGCACACCAACCCCGCCGC TATGGGATGATTGCAGATGGCACACACACCAACCCCGCCGC < 41bp 0.744046822519945 0.502009283481576 0.12912253 0.115109235 prediction 0.484075078076738 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578329 chr16:2578332 synonymous SNV . 0 24 hm5C_associated_SNPs_68321 0 0 3 BUD13 POSTAR2 ENCODE chr16:2578308-2578380
64251 chr15 89169738 89169738 1 + G A rs147477549 89169735 + 89169715 89169755 41 CATGCAGCAGAAGGCCTGCTCCCGGGAAAGCCTCAGGGCCC CATGCAGCAGAAGGCCTGCTCCCAGGAAAGCCTCAGGGCCC < 41bp 0.782389913459469 0.540355971954362 0.85322833 0.37573582 prediction 0.484067883010213 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169735 chr15:89169738 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_68323 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr15:89169715-89169748
64251 chr12 101018241 101018241 1 + A C UCEC 101018237 + 101018217 101018257 41 AAGCAAAGCCAGTCCCAGCACAGAAACTTAAATCGGCCTTG AAGCAAAGCCAGTCCCAGCACAGACACTTAAATCGGCCTTG < 41bp 0.742030118143524 0.337153599863822 0.14707959 0.08218524 prediction 0.484060236287048 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101018237 chr12:101018241 nonsynonymous SNV 0.181 1 25 hm5C_associated_SNPs_68329 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:101018234-101018251
64251 chr17 34842785 34842785 1 + G C SARC 34842784 + 34842764 34842804 41 CCTCTGTTGTTACAGCTGCTCGGTAGTCTGCTTCCGGAAGC CCTCTGTTGTTACAGCTGCTCCGTAGTCTGCTTCCGGAAGC < 41bp 0.862003488747203 0.619980403650789 0.14791915 0.057676226 prediction 0.484046170192829 Functional Loss - ZNHIT3 ENSG00000108278 CDS Human other chr17:34842784 chr17:34842785 synonymous SNV . 0 22 hm5C_associated_SNPs_68330 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:34842785-34842786
64251 chr3 14508101 14508101 1 + G A OV 14508098 + 14508078 14508118 41 CGAGGGCTGACGCTGCCGGGCGCGGGCGCAGGCATCAAGTT CGAGGGCTGACGCTGCCGGGCGCAGGCGCAGGCATCAAGTT < 41bp 0.742020837872934 0.492856426488261 0.4824392 0.4640234 prediction 0.484041675745868 Functional Loss - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14508098 chr3:14508101 synonymous SNV . 0 24 hm5C_associated_SNPs_68331 0 0 5 DDX24 POSTAR2 ENCODE chr3:14508047-14508118
64251 chr3 14508100 14508100 1 + C T UCEC 14508098 + 14508078 14508118 41 CGAGGGCTGACGCTGCCGGGCGCGGGCGCAGGCATCAAGTT CGAGGGCTGACGCTGCCGGGCGTGGGCGCAGGCATCAAGTT < 41bp 0.742020837872934 0.477027508699955 0.4824392 0.5032212 prediction 0.484041675745868 Functional Loss - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14508098 chr3:14508100 nonsynonymous SNV 0.012 3 23 hm5C_associated_SNPs_68332 0 0 5 DDX24 POSTAR2 ENCODE chr3:14508047-14508118
64251 chr19 36279138 36279138 1 + G A LUSC 36279135 + 36279115 36279155 41 CCGTACCCCTCATAGGGTGCCGGGTCCCTGGGGCCCTCCTG CCGTACCCCTCATAGGGTGCCGGATCCCTGGGGCCCTCCTG < 41bp 0.745955580625665 0.503937983499196 0.9096354 0.904866 prediction 0.484035194252938 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279135 chr19:36279138 nonsynonymous SNV 0.006 1 24 hm5C_associated_SNPs_68334 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36279096-36279166
64251 chr7 55223545 55223545 1 + C T TGCT 55223543 + 55223523 55223563 41 GTAATTATGTGGTGACAGATCACGGCTCGTGCGTCCGAGCC GTAATTATGTGGTGACAGATCATGGCTCGTGCGTCCGAGCC < 41bp 0.7925880887782 0.550572820362958 0.5917827 0.6288737 prediction 0.484030536830485 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55223543 chr7:55223545 synonymous SNV . 0 23 hm5C_associated_SNPs_68335 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr7:55223540-55223560
64251 chr4 111397707 111397707 1 + G A COAD 111397704 + 111397684 111397724 41 CTTGACCAGATCGTGTGACTCCAGCGGGGACGGCGGGCCGG CTTGACCAGATCGTGTGACTCCAACGGGGACGGCGGGCCGG < 41bp 0.742010875607394 0.494929120201935 0.45100018 0.25913122 prediction 0.484021751214788 Functional Loss - ENPEP ENSG00000138792 CDS Human protein_coding chr4:111397704 chr4:111397707 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68337 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:111397706-111397707
64251 chr4 88929246 88929246 1 + G T rs371898195 88929244 + 88929224 88929264 41 GATGGACGTAGAGTGGCGCCCGGGCAGCCGGAGGTCGGCCG GATGGACGTAGAGTGGCGCCCGTGCAGCCGGAGGTCGGCCG < 41bp 0.899411514153807 0.657420790129131 0.87299836 0.52504337 prediction 0.483981448049351 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88929244 chr4:88929246 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_68346 1 0 2 PPIG POSTAR2 ENCODE chr4:88929220-88929288
64251 chr7 75517636 75517636 1 + C T SKCM 75517634 + 75517614 75517654 41 GGCACACCAGGGGCTGCAGGCTCCAAGGAGTCCTCCAGGGT GGCACACCAGGGGCTGCAGGCTTCAAGGAGTCCTCCAGGGT < 41bp 0.805712128448194 0.563721801755826 0.91907597 0.38489294 prediction 0.483980653384736 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517634 chr7:75517636 nonsynonymous SNV 0.834 1 23 hm5C_associated_SNPs_68347 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75517629-75517693
64251 chr3 3178966 3178966 1 + C T GBM 3178964 + 3178944 3178984 41 AATTATTTGTCAAAGAGAATCACGAATTAAGAATAGCAGGA AATTATTTGTCAAAGAGAATCATGAATTAAGAATAGCAGGA < 41bp 0.741988234907487 0.46948829751324 0.15241009 0.41655266 prediction 0.483976469814974 Functional Loss - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3178964 chr3:3178966 synonymous SNV . 0 23 hm5C_associated_SNPs_68348 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:3178950-3178998
64251 chr14 93688699 93688699 1 + G T COAD 93688696 + 93688676 93688716 41 ACTGAACTTAAAGACTATCTCAAGAGATTTGCTGATGAAGG ACTGAACTTAAAGACTATCTCAATAGATTTGCTGATGAAGG < 41bp 0.74198171546868 0.363698894244729 0.8740864 0.1110003 prediction 0.48396343093736 Functional Loss - UBR7 ENSG00000012963 CDS Human protein_coding chr14:93688696 chr14:93688699 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_68350 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93688660-93688715
64251 chr14 45433477 45433477 1 + G T UCEC 45433475 + 45433455 45433495 41 GACTGGCTTTTGGCTGGTAACAGAACTCAGAGTGCACACTG GACTGGCTTTTGGCTGGTAACATAACTCAGAGTGCACACTG < 41bp 0.741972067635871 0.407751587025611 0.8690566 0.12085527 prediction 0.483944135271741 Functional Loss - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45433475 chr14:45433477 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68355 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr14:45433455-45433477
64251 chr18 77895899 77895899 1 + G A UCEC 77895896 + 77895876 77895916 41 GCCTCAGGCTGAGGGCACCCCCGGGAGCACCGGCAAGCGAG GCCTCAGGCTGAGGGCACCCCCGAGAGCACCGGCAAGCGAG < 41bp 0.772864576341799 0.530900619678499 0.8866296 0.2880144 prediction 0.483927913326601 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895896 chr18:77895899 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68360 0 0 3 EIF3H POSTAR2 ENCODE chr18:77895856-77895918
64251 chr12 108082471 108082471 1 + C T ESCA 108082469 + 108082449 108082489 41 GCAGAGTGCACGCACCCAGGCACGCCCAAGAGAGCCCCTGG GCAGAGTGCACGCACCCAGGCATGCCCAAGAGAGCCCCTGG < 41bp 0.74195582777234 0.477849696058552 0.039429635 0.04821527 prediction 0.48391165554468 Functional Loss - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082469 chr12:108082471 nonsynonymous SNV 0.980 1 23 hm5C_associated_SNPs_68363 0 0 8 DGCR8 POSTAR2 ENCODE chr12:108082461-108082505
64251 chr1 246797303 246797303 1 + G T UCEC 246797300 + 246797280 246797320 41 TCGCAAATCTTTCTGCCATTCAAGAACAGTGGGGTAAGTAC TCGCAAATCTTTCTGCCATTCAATAACAGTGGGGTAAGTAC < 41bp 0.74195548449253 0.35683826798951 0.85827583 0.2016123 prediction 0.48391096898506 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246797300 chr1:246797303 stopgain 0.998 1 24 hm5C_associated_SNPs_68365 0 0 1 UCHL5 POSTAR2 ENCODE chr1:246797290-246797312
64251 chr1 160385651 160385651 1 + G T LUAD 160385648 + 160385628 160385668 41 ATGGACACCGAGTCCCAGTACTCGGGCTATTCCTACAAGTC ATGGACACCGAGTCCCAGTACTCTGGCTATTCCTACAAGTC < 41bp 0.741949336516049 0.34350512447432 0.07160726 0.06823373 prediction 0.483898673032098 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160385648 chr1:160385651 synonymous SNV . 0 24 hm5C_associated_SNPs_68369 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:160385633-160385666
64251 chr7 129769318 129769318 1 + G T UCEC 129769315 + 129769295 129769335 41 GCTATAATGGAGAGGTGATCCTGGGAGATATCTGGAAGTTG GCTATAATGGAGAGGTGATCCTGTGAGATATCTGGAAGTTG < 41bp 0.741946022288456 0.355790517837066 0.89850867 0.75468993 prediction 0.483892044576911 Functional Loss - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129769315 chr7:129769318 stopgain 1.000 1 24 hm5C_associated_SNPs_68370 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:129769298-129769329
64251 chr4 57891648 57891648 1 + C T LUSC 57891646 + 57891626 57891666 41 GGTGGATGATAAGATTCACTCTCGTGCTAGGGGACCTATTC GGTGGATGATAAGATTCACTCTTGTGCTAGGGGACCTATTC < 41bp 0.741933031916515 0.45839094969236 0.19048697 0.108151466 prediction 0.48386606383303 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57891646 chr4:57891648 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_68374 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:57891623-57891662
64251 chr20 56934720 56934720 1 + C T SKCM 56934718 + 56934698 56934738 41 CTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAG CTGGCGGTAAGGGCTTCAAACTTCGAAGACAGCCTTCAGAG < 41bp 0.821678591770547 0.579748450346781 0.29445872 0.28361386 prediction 0.483860282847532 Functional Loss - RAB22A ENSG00000124209 CDS Human protein_coding chr20:56934718 chr20:56934720 synonymous SNV . 0 23 hm5C_associated_SNPs_68376 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:56934674-56934742
64251 chr20 49576260 49576260 1 + G T CESC 49576258 + 49576238 49576278 41 TCTATTCGGCTGCGGAGCCGCAGGCTCGACTGTGCAGCTTG TCTATTCGGCTGCGGAGCCGCATGCTCGACTGTGCAGCTTG < 41bp 0.741927398969748 0.388589554246734 0.9051108 0.44971985 prediction 0.483854797939496 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576258 chr20:49576260 nonsynonymous SNV 0.789 4 23 hm5C_associated_SNPs_68377 0 0 2 RBM15 POSTAR2 ENCODE chr20:49576230-49576289
64251 chr12 56109967 56109967 1 + C T HNSC 56109965 + 56109945 56109985 41 ACCAGGCCAAGCAGAATGAACGCAAGGAGCTGCAGGGTGAG ACCAGGCCAAGCAGAATGAACGTAAGGAGCTGCAGGGTGAG < 41bp 0.741925505852178 0.49270835281974 0.21207184 0.15698898 prediction 0.483851011704356 Functional Loss - BLOC1S1 ENSG00000135441;ENSG00000258311 CDS Human other chr12:56109965 chr12:56109967 synonymous SNV . 0 23 hm5C_associated_SNPs_68378 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:56109953-56109979
64251 chr3 150128558 150128558 1 + G A HNSC 150128555 + 150128535 150128575 41 GCAGCCGTGCCTCGGTCCTGCCGGGGCTGGGCAGCCCCAGT GCAGCCGTGCCTCGGTCCTGCCGAGGCTGGGCAGCCCCAGT < 41bp 0.750581981057544 0.508656601089549 0.9016588 0.8275084 prediction 0.483850759935989 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128555 chr3:150128558 nonsynonymous SNV 0.306 4 24 hm5C_associated_SNPs_68379 0 0 6 FMR1 POSTAR2 ENCODE chr3:150128518-150128558
64251 chr12 56380786 56380786 1 + G T LUAD 56380784 + 56380764 56380804 41 CTAGGCCCAATGGGCAACCCCAGGCCAGCAAAATTTGCCAG CTAGGCCCAATGGGCAACCCCATGCCAGCAAAATTTGCCAG < 41bp 0.74191733893803 0.387907440737664 0.31600472 0.13506648 prediction 0.483834677876061 Functional Loss - RAB5B ENSG00000111540 CDS Human protein_coding chr12:56380784 chr12:56380786 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68381 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr12:56380753-56380794
64251 chr10 101606756 101606756 1 + C T UCEC 101606754 + 101606734 101606774 41 CTGGAAGCCTGAGGATGAATCTCGACCCTTTCAACAACTAC CTGGAAGCCTGAGGATGAATCTTGACCCTTTCAACAACTAC < 41bp 0.741912891428363 0.454457243569114 0.04204157 0.0058684945 prediction 0.483825782856726 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101606754 chr10:101606756 synonymous SNV . 0 23 hm5C_associated_SNPs_68384 0 0 1 LSM11 POSTAR2 ENCODE chr10:101606748-101606819
64251 chr6 12163572 12163572 1 + A C OV 12163568 + 12163548 12163588 41 AGCTGAGCACAGCCCCCAGACAGCAGCGGGGATGCCTTCTG AGCTGAGCACAGCCCCCAGACAGCCGCGGGGATGCCTTCTG < 41bp 0.741900932922768 0.347558419526057 0.13911796 0.109178245 prediction 0.483801865845535 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12163568 chr6:12163572 synonymous SNV . 0 25 hm5C_associated_SNPs_68387 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:12163571-12163572
64251 chr19 42406968 42406968 1 + A T HNSC 42406964 + 42406944 42406984 41 GCCGCCCGCGGTGCCGCCGCCTGCAGCTGAAGGACATGATC GCCGCCCGCGGTGCCGCCGCCTGCTGCTGAAGGACATGATC < 41bp 0.741895336314636 0.401163069580012 0.5980587 0.19216368 prediction 0.483790672629272 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42406964 chr19:42406968 nonsynonymous SNV 0.982 4 25 hm5C_associated_SNPs_68388 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:42406951-42406972
64251 chr15 58830707 58830707 1 + C T rs7175412 58830705 + 58830685 58830725 41 TGCCTCTGGTGATGATAATCCACGGGTGGTCGGTAGGAAAT TGCCTCTGGTGATGATAATCCATGGGTGGTCGGTAGGAAAT < 41bp 0.802181511404726 0.560286526592176 0.46238115 0.32774392 prediction 0.4837899696251 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58830705 chr15:58830707 synonymous SNV . 0 23 hm5C_associated_SNPs_68389 1 0 2 SND1 POSTAR2 ENCODE chr15:58830696-58830718
64251 chr19 7707702 7707702 1 + C T rs201293382 7707700 + 7707680 7707720 41 TGTGAGAGCAAGAGGCTGACCACGGACAAGGTAGGGGCGGA TGTGAGAGCAAGAGGCTGACCATGGACAAGGTAGGGGCGGA < 41bp 0.753487271570476 0.511602927906884 0.31368512 0.33236977 prediction 0.483768687327184 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7707700 chr19:7707702 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_68393 0 0 9 GRWD1 POSTAR2 ENCODE chr19:7707672-7707708
64251 chr19 1054225 1054225 1 + G A LUAD 1054222 + 1054202 1054242 41 CCCAGAGACTGACCAGGGCTCTGGGCCAGACGCCGTGGGCC CCCAGAGACTGACCAGGGCTCTGAGCCAGACGCCGTGGGCC < 41bp 0.746577976298055 0.50470323903003 0.54814947 0.27699506 prediction 0.48374947453605 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1054222 chr19:1054225 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_68397 0 0 3 BUD13 POSTAR2 ENCODE chr19:1054196-1054239
64251 chr1 55518444 55518444 1 + C T COAD 55518442 + 55518422 55518462 41 CTCAACTGCCAAGGGAAGGGCACGGTTAGCGGCACCCTCAT CTCAACTGCCAAGGGAAGGGCATGGTTAGCGGCACCCTCAT < 41bp 0.784017965132415 0.542148710666484 0.4021845 0.5695553 prediction 0.483738508931863 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518442 chr1:55518444 nonsynonymous SNV 0.958 5 23 hm5C_associated_SNPs_68401 0 0 1 SF3B1 POSTAR2 ENCODE chr1:55518415-55518457
64251 chr6 44274727 44274727 1 - G A UCEC 44274729 - 44274709 44274749 41 CTGCGTCGAGCTGTGCGTTTCTCCATGGAGATCTTAAAGGC CTGCGTCGAGCTGTGCGTTTCTTCATGGAGATCTTAAAGGC < 41bp 0.86102466825007 0.619156402925631 0.9747491 0.10221583 prediction 0.483736530648879 Functional Loss - AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274729 chr6:44274727 stopgain 0.135 2 23 hm5C_associated_SNPs_68402 0 0 3 GRWD1 POSTAR2 ENCODE chr6:44274661-44274751
64251 chr16 29825042 29825042 1 + G A ESCA 29825039 + 29825019 29825059 41 CCCCCCGAGTGCTGCAGCAGCTGGTTGAGGAGGATCGAATG CCCCCCGAGTGCTGCAGCAGCTGATTGAGGAGGATCGAATG < 41bp 0.741867601803799 0.499340196278658 0.49371296 0.5198392 prediction 0.483735203607597 Functional Loss - PRRT2 ENSG00000167371 CDS Human protein_coding chr16:29825039 chr16:29825042 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_68403 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr16:29825041-29825042
64251 chrX 147013963 147013963 1 + C T CESC 147013961 + 147013941 147013981 41 CAGAGTTCAAGGCAGCTTGCCTCGAGATTTCATGAACAGTT CAGAGTTCAAGGCAGCTTGCCTTGAGATTTCATGAACAGTT < 41bp 0.741855655556565 0.458912017911397 0.2387437 0.017011672 prediction 0.48371131111313 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147013961 chrX:147013963 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_68407 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:147013945-147013971
64251 chr12 56428613 56428613 1 + G A STAD 56428610 + 56428590 56428630 41 TCGACTGGAGCTTCCAGGATCCCGAGAAGCAGGTGAGGGAC TCGACTGGAGCTTCCAGGATCCCAAGAAGCAGGTGAGGGAC < 41bp 0.742744255508461 0.500890787457523 0.5053922 0.12945685 prediction 0.483706936101876 Functional Loss - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428610 chr12:56428613 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_68408 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:56428592-56428618
64251 chr15 39874921 39874921 1 + A T SKCM 39874917 + 39874897 39874937 41 CTGGCCAGCATCGCCAGACTCCGCATCGCAAAGGGGGGCGT CTGGCCAGCATCGCCAGACTCCGCTTCGCAAAGGGGGGCGT < 41bp 0.741853251082492 0.394573148799436 0.18838683 0.1799911 prediction 0.483706502164984 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874917 chr15:39874921 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_68409 0 0 2 SND1 POSTAR2 ENCODE chr15:39874882-39874925
64251 chr22 45958920 45958920 1 + C T SKCM 45958918 + 45958898 45958938 41 GTGGTTTTCCGCATGGGCCCCTCCAGTGCTGTCCCCGGGGA GTGGTTTTCCGCATGGGCCCCTTCAGTGCTGTCCCCGGGGA < 41bp 0.74184434925343 0.471552154448124 0.9596417 0.17568284 prediction 0.48368869850686 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45958918 chr22:45958920 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_68412 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:45958910-45958934
64251 chr7 100799995 100799995 1 + C T LUSC 100799993 + 100799973 100800013 41 GCTCATGCAGGTTGTCCTGGCTCGAAAGCCCAAGATGTGCA GCTCATGCAGGTTGTCCTGGCTTGAAAGCCCAAGATGTGCA < 41bp 0.841671243033422 0.59983009122713 0.37557054 0.18856227 prediction 0.483682303612583 Functional Loss - AP1S1 ENSG00000106367 CDS Human protein_coding chr7:100799993 chr7:100799995 stopgain 0.998 1 23 hm5C_associated_SNPs_68414 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100799958-100800039
64251 chr19 54656669 54656669 1 + C T UCEC 54656667 + 54656647 54656687 41 CACCAGATGCCACCCCCACACTCGGACACTGTGGAATTCTA CACCAGATGCCACCCCCACACTTGGACACTGTGGAATTCTA < 41bp 0.741835582919127 0.457650281362348 0.099743634 0.16329738 prediction 0.483671165838254 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656667 chr19:54656669 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68416 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:54656655-54656687
64251 chr12 113873266 113873266 1 + G T LGG 113873264 + 113873244 113873284 41 GCCTGCTGGAGGTGGGCTGGCAGCATGTACCCATCATTGCC GCCTGCTGGAGGTGGGCTGGCATCATGTACCCATCATTGCC < 41bp 0.899471363593089 0.657644019501698 0.30389977 0.40201908 prediction 0.483654688182783 Functional Loss - SDSL ENSG00000139410 CDS Human protein_coding chr12:113873264 chr12:113873266 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_68417 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:113873234-113873266
64251 chr19 18702982 18702982 1 + G T SARC 18702980 + 18702960 18703000 41 CCTTAGGTTTGATGCGGAATCTGCCGAGTGATGGCGGCTCC CCTTAGGTTTGATGCGGAATCTTCCGAGTGATGGCGGCTCC < 41bp 0.809768342420949 0.56794923433989 0.80433095 0.7707279 prediction 0.483638216162117 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18702980 chr19:18702982 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_68421 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:18702944-18702985
64251 chr12 53777147 53777147 1 + C T BLCA 53777145 + 53777125 53777165 41 AGACTCTACAGCTGCAGAACCTCCAAGTTCAGAACCCACAA AGACTCTACAGCTGCAGAACCTTCAAGTTCAGAACCCACAA < 41bp 0.74181019137775 0.445737356320664 0.9560307 0.65077376 prediction 0.4836203827555 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53777145 chr12:53777147 synonymous SNV . 0 23 hm5C_associated_SNPs_68424 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:53777048-53777185
64251 chr5 145862252 145862252 1 + C T UCEC 145862250 + 145862230 145862270 41 GGCCATTGTCCCTCTGGAGGCTCGAATGAAGCAGTTCAAGG GGCCATTGTCCCTCTGGAGGCTTGAATGAAGCAGTTCAAGG < 41bp 0.845254421478792 0.603444621005459 0.3519494 0.22099248 prediction 0.483619600946667 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145862250 chr5:145862252 stopgain 0.999 1 23 hm5C_associated_SNPs_68425 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr5:145862225-145862254
64251 chr17 38508701 38508701 1 + C T SKCM 38508699 + 38508679 38508719 41 GCCAAGCAGCTGCCCGGCTTCACCACCCTCACCATCGCCGA GCCAAGCAGCTGCCCGGCTTCATCACCCTCACCATCGCCGA < 41bp 0.835646096789393 0.593837501145904 0.33084446 0.1999959 prediction 0.483617191286977 Functional Loss - RARA ENSG00000131759 CDS Human protein_coding chr17:38508699 chr17:38508701 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68426 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38508696-38508722
64251 chr8 128751084 128751084 1 + G T BLCA 128751081 + 128751061 128751101 41 GCCTCAGAGTGCATCGACCCCTCGGTGGTCTTCCCCTACCC GCCTCAGAGTGCATCGACCCCTCTGTGGTCTTCCCCTACCC < 41bp 0.924720316705825 0.682930712007253 0.13312238 0.051274836 prediction 0.483579209397145 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128751081 chr8:128751084 synonymous SNV . 0 24 hm5C_associated_SNPs_68437 0 0 5 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr8:128751071-128751108
64251 chr14 24108419 24108419 1 + C T PAAD 24108417 + 24108397 24108437 41 TGCCATCGCCCGACGTCTGGCCCGGGACGGGGCCCACGTGG TGCCATCGCCCGACGTCTGGCCTGGGACGGGGCCCACGTGG < 41bp 0.782114513042291 0.540325775208307 0.0109981 0.01583451 prediction 0.483577475667968 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108417 chr14:24108419 nonsynonymous SNV 0.025 2 23 hm5C_associated_SNPs_68438 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr7 6150815 6150815 1 + G T HNSC 6150813 + 6150793 6150833 41 CTTCAGACCCATCAGCCTATCAGAATCAGCCTGGCAGCTCC CTTCAGACCCATCAGCCTATCATAATCAGCCTGGCAGCTCC < 41bp 0.741778831683187 0.396984067264953 0.51432323 0.119524986 prediction 0.483557663366375 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6150813 chr7:6150815 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68443 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr7:6150796-6150836
64251 chr3 128532529 128532529 1 + A C rs114778883 128532528 + 128532508 128532548 41 GGGGTCTGCCTGCCCACCCACATGAGCCCGCGAGTATGGCA GGGGTCTGCCTGCCCACCCACCTGAGCCCGCGAGTATGGCA < 41bp 0.779605927219766 0.537844891202939 0.1847254 0.07827142 prediction 0.483522072033653 Functional Loss - RAB7A ENSG00000075785 UTR3 Human protein_coding chr3:128532528 chr3:128532529 . . 0 22 hm5C_associated_SNPs_68450 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:128532453-128532668
64251 chr16 1816752 1816752 1 + T C LIHC 1816751 + 1816731 1816771 41 GTGCACTCGGCTGTGGCCAACTGGAAGAAGTGCCTGCACTC GTGCACTCGGCTGTGGCCAACCGGAAGAAGTGCCTGCACTC < 41bp 0.768949129259235 0.527199994390381 0.945669 0.9503753 prediction 0.483498269737707 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1816751 chr16:1816752 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_68459 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:1816682-1816767
64251 chr19 48254313 48254313 1 + G A UCEC 48254310 + 48254290 48254330 41 CTTCTGCAACAAGGGCCAAGCCCGGGCCCCAGGACACCGTA CTTCTGCAACAAGGGCCAAGCCCAGGCCCCAGGACACCGTA < 41bp 0.750878448442269 0.509132736736315 0.6574669 0.25620857 prediction 0.483491423411908 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48254310 chr19:48254313 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_68462 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:48254302-48254331
64251 chr22 37964666 37964666 1 + G T UCEC 37964663 + 37964643 37964683 41 ACCCAGAGATGGATGCGCGGCAGGAGCGGGTGGAGGTGCTG ACCCAGAGATGGATGCGCGGCAGTAGCGGGTGGAGGTGCTG < 41bp 0.916664821938844 0.674920291587106 0.89065266 0.8668229 prediction 0.483489060703476 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964663 chr22:37964666 stopgain 0.012 1 24 hm5C_associated_SNPs_68463 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:37964639-37964688
64251 chr1 53393114 53393114 1 + G C UCEC 53393113 + 53393093 53393133 41 GCGACCCTGCGCCGGGTGTTCGTGGTGGGGGTTGGCATGAC GCGACCCTGCGCCGGGTGTTCCTGGTGGGGGTTGGCATGAC < 41bp 0.817586346249352 0.575845820563099 0.896006 0.6947949 prediction 0.483481051372507 Functional Loss - SCP2 ENSG00000116171 CDS Human protein_coding chr1:53393113 chr1:53393114 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_68464 0 0 4 DDX3X POSTAR2 ENCODE chr1:53393061-53393137
64251 chr10 103906724 103906724 1 + C T UCEC 103906722 + 103906702 103906742 41 GCTCCCGATGGAATGTCAAGCGCCATCAGGACATCACCATC GCTCCCGATGGAATGTCAAGCGTCATCAGGACATCACCATC < 41bp 0.741738809685315 0.461480177488208 0.19322005 0.0647544 prediction 0.483477619370629 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906722 chr10:103906724 synonymous SNV . 0 23 hm5C_associated_SNPs_68465 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:103906713-103906732
64251 chr7 99971833 99971833 1 + C T STAD 99971831 + 99971811 99971851 41 CCTGGAGACGGGGCCACTTCCACAGGCAGTCCTTCTACAGC CCTGGAGACGGGGCCACTTCCATAGGCAGTCCTTCTACAGC < 41bp 0.788592161069198 0.546857507981089 0.8324629 0.8798097 prediction 0.483469306176218 Functional Loss - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971831 chr7:99971833 synonymous SNV . 0 23 hm5C_associated_SNPs_68467 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99971805-99971835
64251 chr10 43882176 43882176 1 - T G STAD 43882177 - 43882157 43882197 41 GCATGGGGGTGTCTGCTGCCCAGGCCACTTACAGTGGCCTG GCATGGGGGTGTCTGCTGCCCCGGCCACTTACAGTGGCCTG < 41bp 0.766601339870594 0.524870870697396 0.32232308 0.273067 prediction 0.483460938346396 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882177 chr10:43882176 nonsynonymous SNV 0.540 2 22 hm5C_associated_SNPs_68469 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:43882034-43882243
64251 chr20 25193907 25193907 1 + G T THCA 25193905 + 25193885 25193925 41 TACCACGTTCACAGAGCGCTCAGGGAATCCGGGAACTACTG TACCACGTTCACAGAGCGCTCATGGAATCCGGGAACTACTG < 41bp 0.741724982633233 0.418205295689563 0.9244802 0.83618987 prediction 0.483449965266465 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25193905 chr20:25193907 nonsynonymous SNV 0.078 1 23 hm5C_associated_SNPs_68473 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:25193902-25193925
64251 chr17 8159907 8159907 1 + A C UCEC 8159906 + 8159886 8159926 41 CCACACGGCCAAGCCGCTTCCAGCAACAGCAAGGGCTGAGA CCACACGGCCAAGCCGCTTCCCGCAACAGCAAGGGCTGAGA < 41bp 0.741710834699642 0.470329419163084 0.25850457 0.17572233 prediction 0.483421669399284 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8159906 chr17:8159907 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_68480 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:8159895-8159915
64251 chr17 80708346 80708346 1 + C T OV 80708344 + 80708324 80708364 41 AGATTGTCCCCGCGTTGCTCCACGGGGATCTCTGGTCGGGA AGATTGTCCCCGCGTTGCTCCATGGGGATCTCTGGTCGGGA < 41bp 0.756933853967013 0.515224602230411 0.92913043 0.89887995 prediction 0.483418503473203 Functional Loss - FN3K ENSG00000167363 CDS Human protein_coding chr17:80708344 chr17:80708346 synonymous SNV . 0 23 hm5C_associated_SNPs_68482 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80708335-80708353
64251 chr19 44680813 44680813 1 + G T LGG 44680811 + 44680791 44680831 41 CTTCAAGTCTTCAGGCCCATCAGGGAGTTCACACTGGAGAG CTTCAAGTCTTCAGGCCCATCATGGAGTTCACACTGGAGAG < 41bp 0.890952354511936 0.649245302157059 0.8788971 0.3042265 prediction 0.483414104709753 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680811 chr19:44680813 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_68484 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44680800-44680820
64251 chr1 44169777 44169777 1 + T C COAD 44169776 + 44169756 44169796 41 GCTTCCCAAGAGAGTCAAATCTAGACTGGTGAGTATTTTCT GCTTCCCAAGAGAGTCAAATCCAGACTGGTGAGTATTTTCT < 41bp 0.741706084170429 0.490821785170032 0.2216315 0.25431293 prediction 0.483412168340857 Functional Loss - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44169776 chr1:44169777 synonymous SNV . 0 22 hm5C_associated_SNPs_68485 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:44169756-44169779
64251 chr20 45353991 45353991 1 + G A rs6094438 45353988 + 45353968 45354008 41 TGGCCTGGCTGGTCCTGGGCCGCGCTGTGGTTGGCTTCGCC TGGCCTGGCTGGTCCTGGGCCGCACTGTGGTTGGCTTCGCC < 41bp 0.741700191838582 0.490650210327371 0.17624757 0.08533785 prediction 0.483400383677163 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353988 chr20:45353991 nonsynonymous SNV 0.055 1 24 hm5C_associated_SNPs_68487 1 0 2 XPO5 POSTAR2 ENCODE chr20:45353931-45354016
64251 chr4 139964399 139964399 1 + G A UCEC 139964396 + 139964376 139964416 41 ATGCAGGGCCGTCCTGCACACCCGACCTCCCCGGTTCCAGA ATGCAGGGCCGTCCTGCACACCCAACCTCCCCGGTTCCAGA < 41bp 0.743581349272585 0.501887787382911 0.08094171 0.043183923 prediction 0.483387123779347 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139964396 chr4:139964399 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_68489 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr4:139964386-139964415
64251 chr19 39965349 39965349 1 + C T CESC 39965347 + 39965327 39965367 41 TGGGACAGACAGGTGTCATCCGCAGTGTCACGGTACGTGGG TGGGACAGACAGGTGTCATCCGTAGTGTCACGGTACGTGGG < 41bp 0.766740806798924 0.525052706889411 0.1563699 0.07182196 prediction 0.483376199819025 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39965347 chr19:39965349 synonymous SNV . 0 23 hm5C_associated_SNPs_68492 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr19:39965325-39965353
64251 chr22 29695615 29695615 1 + G T LUAD 29695613 + 29695593 29695633 41 TGATCGTGGCAGAGGTGGCCCTGGTGGCATGCGGGGAGGAA TGATCGTGGCAGAGGTGGCCCTTGTGGCATGCGGGGAGGAA < 41bp 0.741684392052015 0.398178120908168 0.5379262 0.24475387 prediction 0.48336878410403 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695613 chr22:29695615 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68494 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:29695595-29695631
64251 chr1 196654312 196654312 1 + G T LUAD 196654310 + 196654290 196654330 41 ATGGTTTTTATCCTGCAACCCGGGGAAATACAGCAAAATGC ATGGTTTTTATCCTGCAACCCGTGGAAATACAGCAAAATGC < 41bp 0.741671136960242 0.399671448263835 0.37402123 0.04674408 prediction 0.483342273920485 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196654310 chr1:196654312 synonymous SNV . 0 23 hm5C_associated_SNPs_68496 0 0 2 SND1 POSTAR2 ENCODE chr1:196654283-196654353
64251 chr19 6534765 6534765 1 + C T UCEC 6534763 + 6534743 6534783 41 TCTTTCAACTAGAGCTGCGGCGCGTGGTGGCCGGCGAGGGC TCTTTCAACTAGAGCTGCGGCGTGTGGTGGCCGGCGAGGGC < 41bp 0.755007208552883 0.513337988998245 0.4521241 0.39032277 prediction 0.483338439109277 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6534763 chr19:6534765 synonymous SNV . 0 23 hm5C_associated_SNPs_68498 0 0 2 RBM15 POSTAR2 ENCODE chr19:6534754-6534783
64251 chr1 160325672 160325672 1 + C T STAD 160325670 + 160325650 160325690 41 CAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGCTCT CAGGCCCTGGCAGATGTGGCCATGGTGCTGGGACGTGCTCT < 41bp 0.793825605911812 0.552173472213004 0.8813037 0.6563435 prediction 0.483304267397617 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160325670 chr1:160325672 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_68500 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:160325667-160325691
64251 chr15 85326964 85326964 1 + G T LUSC 85326962 + 85326942 85326982 41 TCGGACAGCCCTCGTAGCATCTGCAGTGACAGCAGCAGCAA TCGGACAGCCCTCGTAGCATCTTCAGTGACAGCAGCAGCAA < 41bp 0.892229974848377 0.650581886701158 0.09193471 0.086196005 prediction 0.483296176294438 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326962 chr15:85326964 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68503 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:85326925-85326964
64251 chr3 179460065 179460065 1 + G T LUAD 179460063 + 179460043 179460083 41 GCATTCAGTGCTGTCAGACCCGGAAAGTCCGCTACACGGAG GCATTCAGTGCTGTCAGACCCGTAAAGTCCGCTACACGGAG < 41bp 0.741643475151177 0.396939428625657 0.8715272 0.29143798 prediction 0.483286950302353 Functional Loss - USP13 ENSG00000058056 CDS Human protein_coding chr3:179460063 chr3:179460065 synonymous SNV . 0 23 hm5C_associated_SNPs_68507 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:179460065-179460089
64251 chr5 225597 225597 1 + A C UCEC 225596 + 225576 225616 41 TGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTG TGGAGGTGGCATTTCTACGACCCCGTGAAGGGCTCCGACTG < 41bp 0.759204119381852 0.517560751073028 0.19351375 0.3133802 prediction 0.483286736617649 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:225596 chr5:225597 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_68508 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr5:225580-225600
64251 chr4 17812771 17812771 1 + A C rs531531035 17812770 + 17812750 17812790 41 CGCAGCAGCCGCACCAGAACCAGGCGAAGCTGGTGGTGGCG CGCAGCAGCCGCACCAGAACCCGGCGAAGCTGGTGGTGGCG < 41bp 0.763705073274838 0.522064008894462 0.9081794 0.8915524 prediction 0.483282128760752 Functional Loss - NCAPG ENSG00000109805 CDS Human protein_coding chr4:17812770 chr4:17812771 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_68509 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:17812760-17812780
64251 chr11 2940624 2940624 1 + G T LUAD 2940622 + 2940602 2940642 41 GGCTACCTCATGTCCTTCTTCGGGCTCCTCCAGATGGTGAG GGCTACCTCATGTCCTTCTTCGTGCTCCTCCAGATGGTGAG < 41bp 0.741640871532685 0.386743248084462 0.91662216 0.23175526 prediction 0.48328174306537 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2940622 chr11:2940624 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_68510 0 0 2 PPIG POSTAR2 ENCODE chr11:2940562-2940632
64251 chr19 19576354 19576354 1 + C T READ 19576352 + 19576332 19576372 41 TTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAG TTGCTGAGGGCAACAGAGGCCATGGCCATGGCCATGGGCAG < 41bp 0.741638298704491 0.484565591943192 0.30839676 0.34905863 prediction 0.483276597408983 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19576352 chr19:19576354 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_68511 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:19576330-19576355
64251 chr1 229772997 229772997 1 + G A STAD 229772994 + 229772974 229773014 41 CAGAACTTACTGTCCCTGGTCAAGAGTGACTTCCCTATCCA CAGAACTTACTGTCCCTGGTCAAAAGTGACTTCCCTATCCA < 41bp 0.745656243534219 0.504020542780339 0.90423346 0.5094296 prediction 0.483271401507761 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772994 chr1:229772997 synonymous SNV . 0 24 hm5C_associated_SNPs_68512 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:229772911-229773005
64251 chr12 132632305 132632305 1 + G A STAD 132632302 + 132632282 132632322 41 GGCAGCCGTGGATGCCGTGGCCCGGGTCACTGGCCAGCACC GGCAGCCGTGGATGCCGTGGCCCAGGTCACTGGCCAGCACC < 41bp 0.773916281199946 0.532292693110014 0.8960223 0.56840104 prediction 0.483247176179862 Functional Loss - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132632302 chr12:132632305 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_68514 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132632292-132632313
64251 chr4 949616 949616 1 + C T STAD 949614 + 949594 949634 41 ACGAGCCACTCAGCAAGGAGCGCGTGGAAGCCTTCAGCGAC ACGAGCCACTCAGCAAGGAGCGTGTGGAAGCCTTCAGCGAC < 41bp 0.741623085305659 0.483904168691047 0.20394364 0.1636889 prediction 0.483246170611317 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:949614 chr4:949616 synonymous SNV . 0 23 hm5C_associated_SNPs_68515 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:949615-949616
64251 chr11 17393935 17393935 1 + C T rs76394293 17393933 + 17393913 17393953 41 AAACAAACCCCTAGGGAACACTCGGATGCAGTTCCGGATGC AAACAAACCCCTAGGGAACACTTGGATGCAGTTCCGGATGC < 41bp 0.741598743942362 0.478548893470335 0.12517244 0.12174526 prediction 0.483197487884723 Functional Loss - NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17393933 chr11:17393935 nonsynonymous SNV 0.075 1 23 hm5C_associated_SNPs_68521 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:17393912-17393940
64251 chr21 47969760 47969760 1 + G T CESC 47969758 + 47969738 47969778 41 TGAGCAGCGGCCGGATGCCTCGGAGGAGGACAGCTTCCAGT TGAGCAGCGGCCGGATGCCTCGTAGGAGGACAGCTTCCAGT < 41bp 0.741590515473325 0.397820948728838 0.91667354 0.41387713 prediction 0.48318103094665 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47969758 chr21:47969760 stopgain 0.914 1 23 hm5C_associated_SNPs_68525 0 0 6 AARS POSTAR2 ENCODE chr21:47969696-47969779
64251 chr10 13237117 13237117 1 + C T rs74881009 13237115 + 13237095 13237135 41 ACAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAGTTCC ACAGCCCCCTGCTCAGCCTCCATGGACAGGATCCGAGTTCC < 41bp 0.807874819361935 0.566299569034798 0.03141573 0.015903562 prediction 0.483150500654274 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13237115 chr10:13237117 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_68532 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:13237115-13237158
64251 chr16 30964697 30964697 1 + C T CESC 30964695 + 30964675 30964715 41 ACTCTGTCCACCAGTCGCCACACCAGAGACTGCACCGCTAC ACTCTGTCCACCAGTCGCCACATCAGAGACTGCACCGCTAC < 41bp 0.802144553221618 0.560570697379082 0.20740074 0.3362125 prediction 0.483147711685072 Functional Loss - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964695 chr16:30964697 synonymous SNV . 0 23 hm5C_associated_SNPs_68533 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:30964697-30964698
64251 chr2 228207487 228207487 1 + G T UCEC 228207484 + 228207464 228207504 41 GCACAGATCAGATTCTGCCCCAAGAAATAAAATTTCAAGGT GCACAGATCAGATTCTGCCCCAATAAATAAAATTTCAAGGT < 41bp 0.741561041251829 0.37819976982802 0.32354987 0.1278876 prediction 0.483122082503657 Functional Loss - MFF ENSG00000168958 CDS Human protein_coding chr2:228207484 chr2:228207487 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_68538 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr2:228207465-228207487
64251 chr19 18701700 18701700 1 + G A rs34613961 18701697 + 18701677 18701717 41 AGTTGATGGAGACGCCAGAGCTGGCGGGGCAGGAGGACGCT AGTTGATGGAGACGCCAGAGCTGACGGGGCAGGAGGACGCT < 41bp 0.742728614865752 0.501169103663669 0.81687737 0.40832007 prediction 0.483119022404166 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18701697 chr19:18701700 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68539 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:18701680-18701730
64251 chr2 12863643 12863643 1 + C T BLCA 12863641 + 12863621 12863661 41 GGGGGCTGGTGCTGCGGGACCTCAAGCTGCGGAAATTCATC GGGGGCTGGTGCTGCGGGACCTTAAGCTGCGGAAATTCATC < 41bp 0.741553704968324 0.447177711669896 0.121818125 0.13413364 prediction 0.483107409936647 Functional Loss - TRIB2 ENSG00000071575 CDS Human protein_coding chr2:12863641 chr2:12863643 synonymous SNV . 0 23 hm5C_associated_SNPs_68546 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:12863639-12863669
64251 chr9 130207060 130207060 1 + T C KIRC 130207059 + 130207039 130207079 41 ATTCACACCGGGGAGAAGCCCTACAGATGTGCCGCGTGTGG ATTCACACCGGGGAGAAGCCCCACAGATGTGCCGCGTGTGG < 41bp 0.775611638018894 0.534060606941828 0.570563 0.17847943 prediction 0.483102062154133 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207059 chr9:130207060 nonsynonymous SNV 0.784 1 22 hm5C_associated_SNPs_68548 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:130207049-130207087
64251 chr11 18424527 18424527 1 + G T LUAD 18424524 + 18424504 18424544 41 GAGTTCACCCATTAAGCTGTCATGGGTGGGTCCTTGGGGAA GAGTTCACCCATTAAGCTGTCATTGGTGGGTCCTTGGGGAA < 41bp 0.741546076589402 0.352347223522898 0.8828858 0.080721825 prediction 0.483092153178804 Functional Loss - LDHA ENSG00000134333 CDS Human protein_coding chr11:18424524 chr11:18424527 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_68549 0 0 12 DDX55 POSTAR2 ENCODE chr11:18424505-18424561
64251 chr7 128509529 128509529 1 + G C rs3736606 128509525 + 128509505 128509545 41 GTGGCGGGAGTTGAGCCGGACTGGGCGGGAGCCCCACGGGG GTGGCGGGAGTTGAGCCGGACTGGCCGGGAGCCCCACGGGG < 41bp 0.834817057286619 0.593271300374796 0.9175783 0.8548714 prediction 0.483091513823647 Functional Loss - LOC100130705 ENSG00000135253 ncRNA_intronic Human protein_coding chr7:128509525 chr7:128509529 . . 0 25 hm5C_associated_SNPs_68550 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr7:128509512-128509542
64251 chr12 56631103 56631103 1 + C T BLCA 56631101 + 56631081 56631121 41 GGGTCACTGCTGGGGTCTTCCTCTATGTGGCCCTTGTGGAC GGGTCACTGCTGGGGTCTTCCTTTATGTGGCCCTTGTGGAC < 41bp 0.824149690890431 0.582604479589224 0.9503957 0.21605355 prediction 0.483090422602413 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56631101 chr12:56631103 synonymous SNV . 0 23 hm5C_associated_SNPs_68551 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:56631078-56631105
64251 chr11 75431194 75431194 1 + G T LUAD 75431191 + 75431171 75431211 41 TGCTGGACTATATGGAAGTACATGAAGGACTATTTCCCCAT TGCTGGACTATATGGAAGTACATTAAGGACTATTTCCCCAT < 41bp 0.741543979959127 0.343343205945716 0.39372987 0.3181011 prediction 0.483087959918253 Functional Loss - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75431191 chr11:75431194 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_68552 0 0 1 PRPF8 POSTAR2 ENCODE chr11:75431194-75431275
64251 chr17 27068540 27068540 1 + G A rs192081177 27068537 + 27068517 27068557 41 TTGGATGAGACACACCCTTACACGGTGACTTCCGTGTCCTG TTGGATGAGACACACCCTTACACAGTGACTTCCGTGTCCTG < 41bp 0.743322266495468 0.501778821944375 0.75952387 0.26859528 prediction 0.483086889102186 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27068537 chr17:27068540 synonymous SNV . 0 24 hm5C_associated_SNPs_68553 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:27068490-27068555
64251 chr9 129796780 129796780 1 + G T STAD 129796778 + 129796758 129796798 41 CCTAACGTTGTGGCCTTTACCCGGAGGTTTAACCAGGTAAG CCTAACGTTGTGGCCTTTACCCTGAGGTTTAACCAGGTAAG < 41bp 0.741543147520326 0.393649629333535 0.92211485 0.38726312 prediction 0.483086295040652 Functional Loss - RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129796778 chr9:129796780 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_68554 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:129796771-129796793
64251 chr19 44777858 44777858 1 + C T ACC 44777856 + 44777836 44777876 41 CTACAGATGTCAGGTATATGCCCGGAGCTCCAACCAGAACT CTACAGATGTCAGGTATATGCCTGGAGCTCCAACCAGAACT < 41bp 0.771922837876468 0.530381442359174 0.385927 0.12291649 prediction 0.483082791034588 Functional Loss - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44777856 chr19:44777858 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_68555 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:44777850-44777865
64251 chr6 43488054 43488054 1 + G A UCEC 43488051 + 43488031 43488071 41 CATGGATCCCCCTGGGGAACCAGGCTGATCTCTTTCCAGAG CATGGATCCCCCTGGGGAACCAGACTGATCTCTTTCCAGAG < 41bp 0.754475853786102 0.51294861572501 0.81430537 0.43518203 prediction 0.483054476122184 Functional Loss - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488051 chr6:43488054 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_68560 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr6:43488047-43488068
64251 chr4 74303922 74303922 1 + G T UCEC 74303919 + 74303899 74303939 41 TATTTTTTGCCCAGTTTGTTCAAGAAGCCACTTACAAGGAA TATTTTTTGCCCAGTTTGTTCAATAAGCCACTTACAAGGAA < 41bp 0.741525836904868 0.364282285746744 0.5495746 0.19895124 prediction 0.483051673809735 Functional Loss - AFP ENSG00000081051 CDS Human protein_coding chr4:74303919 chr4:74303922 stopgain 0.500 0 24 hm5C_associated_SNPs_68561 0 0 6 IGF2BP3 POSTAR2 ENCODE chr4:74303922-74303938
64251 chr12 6626069 6626069 1 + G T LUSC 6626066 + 6626046 6626086 41 AGGTTCTCAGTGGCGATCAACTGGAAGCAGCAGCCCGAGAC AGGTTCTCAGTGGCGATCAACTGTAAGCAGCAGCCCGAGAC < 41bp 0.920397040234674 0.678875409616165 0.69347143 0.8076266 prediction 0.483043261237019 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6626066 chr12:6626069 stopgain 0.484 1 24 hm5C_associated_SNPs_68564 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr12:6626035-6626071
64251 chr14 39818102 39818102 1 + T C STAD 39818101 + 39818081 39818121 41 ACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGAG ACCTCCTTTCCCCCCACCTCCCCCAGGAGCCATGTTTGGAG < 41bp 0.823569363727255 0.582054583853576 0.94967663 0.0671621 prediction 0.483029559747359 Functional Loss - MIA2 ENSG00000150527;ENSG00000258941 CDS Human other chr14:39818101 chr14:39818102 synonymous SNV . 0 22 hm5C_associated_SNPs_68566 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:39818098-39818131
64251 chr13 28009582 28009582 1 + C T UCEC 28009580 + 28009560 28009600 41 ATTCCCAAAGGTCAAAAAATCTCGTGAAAAACGGAGTTTGG ATTCCCAAAGGTCAAAAAATCTTGTGAAAAACGGAGTTTGG < 41bp 0.741509008381975 0.486409538796911 0.37861782 0.30681378 prediction 0.48301801676395 Functional Loss - GTF3A ENSG00000122034 CDS Human protein_coding chr13:28009580 chr13:28009582 nonsynonymous SNV 0.915 2 23 hm5C_associated_SNPs_68567 0 0 5 AGGF1 POSTAR2 ENCODE chr13:28009569-28009643
64251 chr3 185324227 185324227 1 + G T UCEC 185324225 + 185324205 185324245 41 ACCTCAGGAACAGGCTGTAACAGAGATGATTTCTGAAGAGA ACCTCAGGAACAGGCTGTAACATAGATGATTTCTGAAGAGA < 41bp 0.7415053079892 0.392657743033494 0.887612 0.45833433 prediction 0.4830106159784 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185324225 chr3:185324227 stopgain 0.954 1 23 hm5C_associated_SNPs_68568 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:185324195-185324235
64251 chr12 1895294 1895294 1 + G A rs187669714 1895291 + 1895271 1895311 41 ACCAGGGCCTGCGGCACTTGCGGGCCTCCCTGCTGGCTACT ACCAGGGCCTGCGGCACTTGCGGACCTCCCTGCTGGCTACT < 41bp 0.743498979416772 0.501996871881911 0.94785607 0.932642 prediction 0.483004215069721 Functional Loss - ADIPOR2 ENSG00000006831 UTR3 Human protein_coding chr12:1895291 chr12:1895294 . . 0 24 hm5C_associated_SNPs_68570 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:1895257-1895312
64251 chr7 50450323 50450323 1 + G T LUAD 50450320 + 50450300 50450340 41 CGGCACATCAAGCTGCATTCCGGGGAGAAGCCCTTCAAATG CGGCACATCAAGCTGCATTCCGGTGAGAAGCCCTTCAAATG < 41bp 0.892179880722233 0.650684451521478 0.9315287 0.5582949 prediction 0.48299085840151 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50450320 chr7:50450323 synonymous SNV . 0 24 hm5C_associated_SNPs_68573 0 0 4 FMR1 POSTAR2 ENCODE chr7:50450287-50450399
64251 chr7 151073746 151073746 1 + C T rs370586827 151073744 + 151073724 151073764 41 TGTACATGGGTTTTGATGCACTCGTGGCCGAAGCTGCGCTG TGTACATGGGTTTTGATGCACTTGTGGCCGAAGCTGCGCTG < 41bp 0.765219284635881 0.523726780945893 0.24107397 0.20846951 prediction 0.482985007379977 Functional Loss - NUB1 ENSG00000013374 CDS Human protein_coding chr7:151073744 chr7:151073746 synonymous SNV . 0 23 hm5C_associated_SNPs_68574 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr7:151073726-151073769
64251 chr3 107447705 107447705 1 + C T COAD 107447703 + 107447683 107447723 41 CCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCT CCCAACACCCACTGTCAATCCATGAAAGAAACTTTGGGCCT < 41bp 0.840543787044357 0.599051599906575 0.14304781 0.092303514 prediction 0.482984374275563 Functional Loss - BBX ENSG00000114439 CDS Human protein_coding chr3:107447703 chr3:107447705 stopgain 1.000 1 23 hm5C_associated_SNPs_68575 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr3:107447677-107447706
64251 chr10 15145637 15145637 1 + C T STAD 15145635 + 15145615 15145655 41 TGTCAGGGTGGACGCCTGCACACGTCAGGAAGCAGCTTGCC TGTCAGGGTGGACGCCTGCACATGTCAGGAAGCAGCTTGCC < 41bp 0.765682110391703 0.524195607462891 0.14159676 0.100204706 prediction 0.482973005857624 Functional Loss - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145635 chr10:15145637 synonymous SNV . 0 23 hm5C_associated_SNPs_68579 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:15145607-15145638
64251 chr2 202137431 202137431 1 + A C UCEC 202137427 + 202137407 202137447 41 GAGAAGGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCCAA GAGAAGGAAAGTTGGACATCCTGACAAGAGTCTGTGCCCAA < 41bp 0.741484980421558 0.367155945713921 0.111650646 0.10540256 prediction 0.482969960843116 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202137427 chr2:202137431 nonsynonymous SNV 0.618 3 25 hm5C_associated_SNPs_68580 0 0 5 BUD13 POSTAR2 ENCODE chr2:202137388-202137483
64251 chr1 162467949 162467949 1 + C T BLCA 162467947 + 162467927 162467967 41 CTGGCTCGCCCCCCGGCGCCCTCAAGCAGTTCTTGCCGCCA CTGGCTCGCCCCCCGGCGCCCTTAAGCAGTTCTTGCCGCCA < 41bp 0.778769881139748 0.537288579118503 0.7641869 0.29950523 prediction 0.48296260404249 Functional Loss - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162467947 chr1:162467949 synonymous SNV . 0 23 hm5C_associated_SNPs_68581 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:162467940-162467960
64251 chr1 84961625 84961625 1 + C T HNSC 84961623 + 84961603 84961643 41 AATTCTGAATAATTTTACAACACGGCTGGGTCATTCAATTG AATTCTGAATAATTTTACAACATGGCTGGGTCATTCAATTG < 41bp 0.741475843903152 0.477010601341952 0.01594022 0.025010288 prediction 0.482951687806304 Functional Loss - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84961623 chr1:84961625 nonsynonymous SNV 0.945 3 23 hm5C_associated_SNPs_68586 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:84961567-84961636
64251 chr19 56658434 56658434 1 + G A COAD 56658431 + 56658411 56658451 41 TGTGCCGGGACTGGCTGCGGCCCGAGGTGCACACCAAGGAG TGTGCCGGGACTGGCTGCGGCCCAAGGTGCACACCAAGGAG < 41bp 0.754529978032613 0.513056679990103 0.59245324 0.53685766 prediction 0.482946596085019 Functional Loss - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56658431 chr19:56658434 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_68589 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:56658414-56658448
64251 chr6 26157158 26157158 1 + G T SARC 26157155 + 26157135 26157175 41 CCGAAAAAGGCGAAAGCAGCCAAGCCAAAAAAGGCGCCCAA CCGAAAAAGGCGAAAGCAGCCAATCCAAAAAAGGCGCCCAA < 41bp 0.74147011022811 0.362718663709745 0.34502432 0.46856982 prediction 0.48294022045622 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26157155 chr6:26157158 nonsynonymous SNV 0.893 1 24 hm5C_associated_SNPs_68592 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156940-26157180
64251 chr7 150762029 150762029 1 + G A rs182549949 150762026 + 150762006 150762046 41 GCCCCACCAGGAGGCGACTCCTCGGGCCTCCAAAGGGGCCC GCCCCACCAGGAGGCGACTCCTCAGGCCTCCAAAGGGGCCC < 41bp 0.741463532654912 0.497212760008913 0.895133 0.43028867 prediction 0.482927065309825 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150762026 chr7:150762029 nonsynonymous SNV 0.894 0 24 hm5C_associated_SNPs_68595 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:150761998-150762029
64251 chr5 6750571 6750571 1 + A C LUSC 6750567 + 6750547 6750587 41 GTCCAGCCCCCAGCTCCTGTCTTCAGGCTCCTCGGCCTCTT GTCCAGCCCCCAGCTCCTGTCTTCCGGCTCCTCGGCCTCTT < 41bp 0.741439664786684 0.301611496174238 0.2586339 0.07677472 prediction 0.482879329573368 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750567 chr5:6750571 synonymous SNV . 0 25 hm5C_associated_SNPs_68602 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:6750535-6750595
64251 chr5 70751716 70751716 1 + G T LIHC 70751713 + 70751693 70751733 41 CCTGCCTCCGCCATGTTCCGCAGGGCACGCCTTAGCGTGAA CCTGCCTCCGCCATGTTCCGCAGTGCACGCCTTAGCGTGAA < 41bp 0.741435227421318 0.379916882000498 0.9095416 0.76592106 prediction 0.482870454842635 Functional Loss - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70751713 chr5:70751716 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_68606 0 0 8 DDX3X POSTAR2 ENCODE chr5:70751626-70751734
64251 chr1 155296421 155296421 1 + G A rs140690414 155296418 + 155296398 155296438 41 CAGGATTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTG CAGGATTTTTCTCCCTGGCCCGCAGTGGTTGTCCCTCCCTG < 41bp 0.741433094035541 0.491607308605066 0.7544699 0.24154845 prediction 0.482866188071083 Functional Loss - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155296418 chr1:155296421 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_68607 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155296393-155296424
64251 chr14 45665409 45665409 1 + G T LAML 45665406 + 45665386 45665426 41 TTTGGAGGATTCTAGCACTTCAGGGGCATCCTGTTCCAAGT TTTGGAGGATTCTAGCACTTCAGTGGCATCCTGTTCCAAGT < 41bp 0.741416623488253 0.356165175532777 0.8834474 0.124925315 prediction 0.482833246976506 Functional Loss - FANCM ENSG00000187790 CDS Human protein_coding chr14:45665406 chr14:45665409 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_68615 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:45665395-45665412
64251 chr1 6270962 6270962 1 + G A COAD 6270959 + 6270939 6270979 41 GAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAG GAGAGGCTGCAGGGCATCGTCACACGGCCGCACCACCTAAG < 41bp 0.769166696965873 0.527753012139494 0.86500365 0.80824065 prediction 0.482827369652759 Functional Loss - RNF207 ENSG00000158286 CDS Human protein_coding chr1:6270959 chr1:6270962 synonymous SNV . 0 24 hm5C_associated_SNPs_68617 0 0 2 PPIG POSTAR2 ENCODE chr1:6270926-6270969
64251 chr1 196654313 196654313 1 + G A SKCM 196654310 + 196654290 196654330 41 ATGGTTTTTATCCTGCAACCCGGGGAAATACAGCAAAATGC ATGGTTTTTATCCTGCAACCCGGAGAAATACAGCAAAATGC < 41bp 0.741671136960242 0.500266912565018 0.37402123 0.19304803 prediction 0.482808448790448 Functional Loss - CFH ENSG00000000971 CDS Human protein_coding chr1:196654310 chr1:196654313 nonsynonymous SNV 0.000 3 24 hm5C_associated_SNPs_68619 0 0 2 SND1 POSTAR2 ENCODE chr1:196654283-196654353
64251 chr11 608145 608145 1 + G A STAD 608142 + 608122 608162 41 GTACAGAGCCCGAACCCCCTCTCGGACCGTCCTCCGCCATG GTACAGAGCCCGAACCCCCTCTCAGACCGTCCTCCGCCATG < 41bp 0.772424844136674 0.531022491612115 0.22203231 0.11438227 prediction 0.482804705049118 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608142 chr11:608145 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68620 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:608133-608162
64251 chr17 79080634 79080634 1 + G A LUAD 79080631 + 79080611 79080651 41 CCCCGATTACGGCGCCGCCTCCCGGGCCTTCCCCGCCCAGA CCCCGATTACGGCGCCGCCTCCCAGGCCTTCCCCGCCCAGA < 41bp 0.74867089256789 0.507276814607417 0.89804554 0.32055748 prediction 0.482788155920946 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080631 chr17:79080634 nonsynonymous SNV 0.410 0 24 hm5C_associated_SNPs_68625 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr6 26020744 26020744 1 + G T LUSC 26020742 + 26020722 26020762 41 CTCGCACTAAGCAAACTGCTCGGAAGTCTACTGGTGGCAAG CTCGCACTAAGCAAACTGCTCGTAAGTCTACTGGTGGCAAG < 41bp 0.8860037166527 0.644618639119808 0.46199006 0.15702155 prediction 0.482770155065784 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020742 chr6:26020744 synonymous SNV . 0 23 hm5C_associated_SNPs_68628 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26020694-26020761
64251 chr5 36168476 36168476 1 + G T LUSC 36168473 + 36168453 36168493 41 TTATAGAAGTGTCCACCCTCCACGGCATACTGTCTCAGTGT TTATAGAAGTGTCCACCCTCCACTGCATACTGTCTCAGTGT < 41bp 0.741373122082256 0.347722452390647 0.22856092 0.13556385 prediction 0.482746244164513 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36168473 chr5:36168476 nonsynonymous SNV 0.377 2 24 hm5C_associated_SNPs_68630 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:36168456-36168496
64251 chr16 1877400 1877400 1 + C T CESC 1877398 + 1877378 1877418 41 ACGGCCTACGCGCCCGAGGGCTCGCCCATCCTCATGCCCGC ACGGCCTACGCGCCCGAGGGCTTGCCCATCCTCATGCCCGC < 41bp 0.757851420000162 0.516489178596457 0.13157684 0.112942636 prediction 0.48272448280741 Functional Loss - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877398 chr16:1877400 nonsynonymous SNV 0.477 0 23 hm5C_associated_SNPs_68634 0 0 1 RPS3 POSTAR2 ENCODE chr16:1877360-1877426
64251 chr19 47673154 47673154 1 + C T UCEC 47673152 + 47673132 47673172 41 GCAAAGGCTGCTCTGAAGCGCACGACCTCCGACTACTTTCT GCAAAGGCTGCTCTGAAGCGCATGACCTCCGACTACTTTCT < 41bp 0.786016034022168 0.544658124498911 0.10877618 0.20520163 prediction 0.482715819046513 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47673152 chr19:47673154 nonsynonymous SNV 0.189 1 23 hm5C_associated_SNPs_68636 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47673086-47673172
64251 chr17 8157564 8157564 1 + C T SKCM 8157562 + 8157542 8157582 41 CTTACTGCTGGATGATGTTGCTCGGGAGTCCTGGCTCCTTC CTTACTGCTGGATGATGTTGCTTGGGAGTCCTGGCTCCTTC < 41bp 0.810252937464036 0.568908448740713 0.29787415 0.23456213 prediction 0.482688977446645 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8157562 chr17:8157564 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_68643 0 0 2 GRWD1 POSTAR2 ENCODE chr17:8157542-8157576
64251 chr1 150054883 150054883 1 + A C BRCA 150054879 + 150054859 150054899 41 GACAGTGGTTGGAGAACTGTCTCGATTGGTCAGTGAACGGA GACAGTGGTTGGAGAACTGTCTCGCTTGGTCAGTGAACGGA < 41bp 0.937260238865301 0.695917818687705 0.8706011 0.08737534 prediction 0.482684840355191 Functional Loss - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054879 chr1:150054883 synonymous SNV . 0 25 hm5C_associated_SNPs_68644 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150054861-150054889
64251 chr3 127327330 127327330 1 + G A STAD 127327327 + 127327307 127327347 41 ACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCA ACGCCATTCTCCTCGCAGATCTGATGGACAGCTGCAAGCCA < 41bp 0.761920926422605 0.520591713113498 0.26531714 0.17687002 prediction 0.482658426618215 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327327 chr3:127327330 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_68650 0 0 7 RTCB POSTAR2 GSE38201,GSM936508 chr3:127327299-127327337
64251 chr10 104161038 104161038 1 + C T ESCA 104161036 + 104161016 104161056 41 TGAAGGGCCTGAGAAGGACACCCGAAGCAGCTTCCGGGGCC TGAAGGGCCTGAGAAGGACACCTGAAGCAGCTTCCGGGGCC < 41bp 0.741329210525573 0.466838804049297 0.38622564 0.38007998 prediction 0.482658421051145 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104161036 chr10:104161038 stopgain 0.104 0 23 hm5C_associated_SNPs_68651 0 0 1 FXR2 POSTAR2 ENCODE chr10:104161024-104161078
64251 chr11 65822751 65822751 1 + G T COAD 65822749 + 65822729 65822769 41 GAAGTTGGCTCAGCAGCAGGCGGCATTGCTGATGCAGCAGG GAAGTTGGCTCAGCAGCAGGCGTCATTGCTGATGCAGCAGG < 41bp 0.892868228876448 0.651540215142371 0.2998004 0.1462723 prediction 0.482656027468154 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65822749 chr11:65822751 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_68652 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:65822715-65822752
64251 chr1 45243437 45243437 1 + G T OV 45243435 + 45243415 45243455 41 AGTCCCACTATGCGCTGCCCCTGGGCCGCAAGAAGGGAGCC AGTCCCACTATGCGCTGCCCCTTGGCCGCAAGAAGGGAGCC < 41bp 0.897653560126621 0.656337698369659 0.17245448 0.020697385 prediction 0.482631723513923 Functional Loss - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243435 chr1:45243437 synonymous SNV . 0 23 hm5C_associated_SNPs_68658 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243283-45243456
64251 chr1 21766663 21766663 1 + G C rs1566523 21766659 + 21766639 21766679 41 GGGTTGGGTGGCGGTTGAGACAGCGGCGGTACTGGGATGGG GGGTTGGGTGGCGGTTGAGACAGCCGCGGTACTGGGATGGG < 41bp 0.844455163502896 0.603141229890974 0.8532926 0.56602 prediction 0.482627867223843 Functional Loss - NBPF3 ENSG00000142794 UTR5 Human protein_coding chr1:21766659 chr1:21766663 . . 0 25 hm5C_associated_SNPs_68662 0 0 2 NCBP2 POSTAR2 ENCODE chr1:21766655-21766814
64251 chr1 36557540 36557540 1 + C T UCEC 36557538 + 36557518 36557558 41 GGCTCTCGGCCCAGCTGACACACGCCTCCTCCCTGGGTTAC GGCTCTCGGCCCAGCTGACACATGCCTCCTCCCTGGGTTAC < 41bp 0.786975087020248 0.545665275234067 0.41125458 0.45526758 prediction 0.482619623572364 Functional Loss - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36557538 chr1:36557540 synonymous SNV . 0 23 hm5C_associated_SNPs_68665 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:36557534-36557562
64251 chr12 13061795 13061795 1 + G A rs147078198 13061792 + 13061772 13061812 41 TTCACCTTCTGTGGTTCCTTCACGGGCTGGAAGAGACATGG TTCACCTTCTGTGGTTCCTTCACAGGCTGGAAGAGACATGG < 41bp 0.764560199085697 0.52325869317464 0.4692375 0.1859006 prediction 0.482603011822113 Functional Loss - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061792 chr12:13061795 synonymous SNV . 0 24 hm5C_associated_SNPs_68667 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:13061765-13061796
64251 chr3 52518594 52518594 1 + G A UCEC 52518591 + 52518571 52518611 41 CGTCCACTGACAGTCTGACTCCCGAGCACCAGCCCATTGCC CGTCCACTGACAGTCTGACTCCCAAGCACCAGCCCATTGCC < 41bp 0.754721887330868 0.513426905075946 0.44689247 0.3055203 prediction 0.482589964509843 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52518591 chr3:52518594 nonsynonymous SNV 0.887 0 24 hm5C_associated_SNPs_68670 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:52518560-52518606
64251 chr1 33236470 33236470 1 + C T SKCM 33236468 + 33236448 33236488 41 CAGCTGGGTACCTGGCTTGTCTCCGGGTGGTTCCCGGCGCC CAGCTGGGTACCTGGCTTGTCTTCGGGTGGTTCCCGGCGCC < 41bp 0.741289134559643 0.483164717023161 0.8086293 0.6895101 prediction 0.482578269119285 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33236468 chr1:33236470 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_68671 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:33236460-33236480
64251 chr2 65250027 65250027 1 + A C rs186278989 65250026 + 65250006 65250046 41 TGTCACCTGGGCCCTACAGACAGGGGCACACGCTTATGGAT TGTCACCTGGGCCCTACAGACCGGGGCACACGCTTATGGAT < 41bp 0.742872559995979 0.501588124978783 0.948614 0.93739676 prediction 0.482568870034393 Functional Loss - SLC1A4 ENSG00000115902 UTR3 Human protein_coding chr2:65250026 chr2:65250027 . . 0 22 hm5C_associated_SNPs_68676 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr2:65250005-65250055
64251 chr13 113887612 113887612 1 + A C PRAD 113887608 + 113887588 113887628 41 AGGAGCGGCGAGGCCGTGGACCGGAGCCTGTTGCGGAGCCT AGGAGCGGCGAGGCCGTGGACCGGCGCCTGTTGCGGAGCCT < 41bp 0.927177313222905 0.685895711656431 0.899326 0.8789543 prediction 0.482563203132949 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113887608 chr13:113887612 nonsynonymous SNV 0.212 1 25 hm5C_associated_SNPs_68677 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:113887600-113887620
64251 chr11 65408899 65408899 1 + C T PAAD 65408897 + 65408877 65408917 41 CACCTGGCTTTGTGTGTGAGCTCGGGGGTGAGGGTGAGCTA CACCTGGCTTTGTGTGTGAGCTTGGGGGTGAGGGTGAGCTA < 41bp 0.796031152140174 0.55475124645406 0.35748547 0.4151524 prediction 0.482559811372229 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408897 chr11:65408899 synonymous SNV . 0 23 hm5C_associated_SNPs_68679 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65408890-65408933
64251 chr11 20409612 20409612 1 + G T LUAD 20409610 + 20409590 20409630 41 GGAGGACCTGCCAGAACTGTCGGACAGCGGGGACGAGGCCG GGAGGACCTGCCAGAACTGTCGTACAGCGGGGACGAGGCCG < 41bp 0.741279162539437 0.386095920673302 0.8845933 0.3991548 prediction 0.482558325078874 Functional Loss - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20409610 chr11:20409612 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68681 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr11:20409612-20409613
64251 chr1 86047778 86047778 1 + C T HNSC 86047776 + 86047756 86047796 41 CAACTTGGGCTGTCCCAACCCTCGGCTGGTCAAAGTTACCG CAACTTGGGCTGTCCCAACCCTTGGCTGGTCAAAGTTACCG < 41bp 0.830993959295981 0.589718209675271 0.023876578 0.043078005 prediction 0.48255149924142 Functional Loss - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047776 chr1:86047778 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68684 0 0 2 SND1 POSTAR2 ENCODE chr1:86047746-86047796
64251 chr5 41917342 41917342 1 + G T UCEC 41917339 + 41917319 41917359 41 GTGAAGGACCCCTGAAAGAACAAGAATGGAATACAACGAAT GTGAAGGACCCCTGAAAGAACAATAATGGAATACAACGAAT < 41bp 0.741262690849196 0.403731645037594 0.26136288 0.225162 prediction 0.482525381698393 Functional Loss - C5orf51 ENSG00000205765 CDS Human protein_coding chr5:41917339 chr5:41917342 stopgain 1.000 1 24 hm5C_associated_SNPs_68688 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr5:41917258-41917357
64251 chr12 121009031 121009031 1 + G T UCEC 121009029 + 121009009 121009049 41 CTCTGTCACCCACTGCCAGTCAGGGCAGTCCCTCATTCTGC CTCTGTCACCCACTGCCAGTCATGGCAGTCCCTCATTCTGC < 41bp 0.741262033757422 0.380979998894348 0.91689706 0.3069244 prediction 0.482524067514843 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121009029 chr12:121009031 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68689 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:121008990-121009042
64251 chr3 107520042 107520042 1 + G C HNSC 107520038 + 107520018 107520058 41 CAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAAA CAACACCGAGGTCGGGGAGACGCGCAGCAGTACTCCAGAAA < 41bp 0.741256321400084 0.470456634049027 0.89882374 0.25192344 prediction 0.482512642800168 Functional Loss - BBX ENSG00000114439 CDS Human protein_coding chr3:107520038 chr3:107520042 nonsynonymous SNV 0.935 2 25 hm5C_associated_SNPs_68691 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:107520007-107520091
64251 chr2 187627166 187627166 1 + G T UCEC 187627164 + 187627144 187627184 41 TGAAAAAGGGCAAGAGAACCCAGAGCAATGACACCAGTCTG TGAAAAAGGGCAAGAGAACCCATAGCAATGACACCAGTCTG < 41bp 0.741251998487693 0.411280612124772 0.32087183 0.08352384 prediction 0.482503996975385 Functional Loss - FAM171B ENSG00000144369 CDS Human protein_coding chr2:187627164 chr2:187627166 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68694 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:187627160-187627180
64251 chr15 42042358 42042358 1 + A T LUAD 42042354 + 42042334 42042374 41 CATCTGAAGGGCCCCTTAACCAGGAAATGTGTTGGAGCTTC CATCTGAAGGGCCCCTTAACCAGGTAATGTGTTGGAGCTTC < 41bp 0.841745943240299 0.600495468401546 0.90437716 0.91381085 prediction 0.482500949677505 Functional Loss - MGA ENSG00000174197 CDS Human protein_coding chr15:42042354 chr15:42042358 stopgain 0.137 0 25 hm5C_associated_SNPs_68695 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:42042341-42042386
64251 chr4 159092310 159092310 1 - C A UCEC 159092312 - 159092292 159092332 41 GCTGAGAAGGGGCCACATCGCAGCCGCGACACCGCCGAGCC GCTGAGAAGGGGCCACATCGCATCCGCGACACCGCCGAGCC < 41bp 0.904626993796323 0.663397879992609 0.77584624 0.16156417 prediction 0.482458227607427 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092312 chr4:159092310 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_68698 0 0 1 EIF3D POSTAR2 ENCODE chr4:159092295-159092375
64251 chr11 65745041 65745041 1 + G T LUAD 65745039 + 65745019 65745059 41 CCCCTCCATCCCTAGGGCTGCTGGAGACCACAGTGCAGAAG CCCCTCCATCCCTAGGGCTGCTTGAGACCACAGTGCAGAAG < 41bp 0.741224089038058 0.39633955811332 0.13850516 0.04743725 prediction 0.482448178076117 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65745039 chr11:65745041 synonymous SNV . 0 23 hm5C_associated_SNPs_68701 0 0 6 DDX55 POSTAR2 ENCODE chr11:65745024-65745059
64251 chr14 24619877 24619877 1 + C T PAAD 24619875 + 24619855 24619895 41 ATTCACTGTACCTTCTGCAACTCGAGCCCTGGCTGGGTGTG ATTCACTGTACCTTCTGCAACTTGAGCCCTGGCTGGGTGTG < 41bp 0.741216936604296 0.453546764426783 0.09983462 0.09463388 prediction 0.482433873208592 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619875 chr14:24619877 nonsynonymous SNV 0.982 2 23 hm5C_associated_SNPs_68704 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24619851-24619900
64251 chrX 16859675 16859675 1 + A C MESO 16859674 + 16859654 16859694 41 AGGTGGAAGTCCTGAAAGAGCAGGTATCCATCAAAGCGGCC AGGTGGAAGTCCTGAAAGAGCCGGTATCCATCAAAGCGGCC < 41bp 0.741216424505797 0.489704107611689 0.27208924 0.0916954 prediction 0.482432849011593 Functional Loss - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16859674 chrX:16859675 nonsynonymous SNV 0.890 1 22 hm5C_associated_SNPs_68705 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16859630-16859675
64251 chr16 24788389 24788389 1 + A C rs4788428 24788385 + 24788365 24788405 41 ATCAGCAGCCACAGCAGCAGCAGCAACAGCAGCAGCCGCAG ATCAGCAGCCACAGCAGCAGCAGCCACAGCAGCAGCCGCAG < 41bp 0.741210392302606 0.335320356491134 0.205259 0.20851791 prediction 0.482420784605212 Functional Loss - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24788385 chr16:24788389 nonsynonymous SNV 0.017 1 25 hm5C_associated_SNPs_68708 0 0 1 SF3B1 POSTAR2 ENCODE chr16:24788384-24788415
64251 chr11 65408860 65408860 1 + G A LGG 65408857 + 65408837 65408877 41 GCCGAGGACCAGGCTGCCAGCTCGGACCTGCTGCATGGGGC GCCGAGGACCAGGCTGCCAGCTCAGACCTGCTGCATGGGGC < 41bp 0.748440636221415 0.507235928794159 0.117040604 0.10075343 prediction 0.482409414854512 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408857 chr11:65408860 synonymous SNV . 0 24 hm5C_associated_SNPs_68712 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:65408831-65408865
64251 chr8 27364421 27364421 1 + G T LUAD 27364419 + 27364399 27364439 41 TGGATGACATCGGGGCTAATCTGAAGCCAGCCCGTGACTTG TGGATGACATCGGGGCTAATCTTAAGCCAGCCCGTGACTTG < 41bp 0.887574768103558 0.646382488195652 0.6982696 0.2780848 prediction 0.482384559815812 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27364419 chr8:27364421 synonymous SNV . 0 23 hm5C_associated_SNPs_68715 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:27364401-27364421
64251 chr4 56815151 56815151 1 + G T rs376565886 56815149 + 56815129 56815169 41 CGCCGGAGCCCGTGCCTGGACGGAAGGAGCTAGTGGGGGAC CGCCGGAGCCCGTGCCTGGACGTAAGGAGCTAGTGGGGGAC < 41bp 0.85793125118294 0.616742728940054 0.8893484 0.7347427 prediction 0.482377044485772 Functional Loss - CEP135 ENSG00000174799 UTR5 Human protein_coding chr4:56815149 chr4:56815151 . . 0 23 hm5C_associated_SNPs_68717 0 0 1 FMR1 POSTAR2 ENCODE chr4:56815111-56815226
64251 chr21 42688752 42688752 1 + G T rs148108671 42688749 + 42688729 42688769 41 TTCCTGACCCAGGGGCTCCGCTGGCTGCGGTCGCCTGGGAG TTCCTGACCCAGGGGCTCCGCTGTCTGCGGTCGCCTGGGAG < 41bp 0.741155941227494 0.360796107221559 0.5591407 0.33751157 prediction 0.482311882454987 Functional Loss - FAM3B ENSG00000183844 UTR5 Human protein_coding chr21:42688749 chr21:42688752 . . 0 24 hm5C_associated_SNPs_68730 0 0 2 DDX3X POSTAR2 ENCODE chr21:42688727-42688793
64251 chr19 1207096 1207096 1 + A T LUAD 1207092 + 1207072 1207112 41 CTGCTGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGCT CTGCTGGGGGAAGGCTCTTACGGCTAGGTGAAGGAGGTGCT < 41bp 0.871217035177224 0.630062951497671 0.9079303 0.7487708 prediction 0.482308167359106 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207092 chr19:1207096 stopgain 1.000 1 25 hm5C_associated_SNPs_68731 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1207044-1207096
64251 chr1 52747474 52747474 1 + G C BLCA 52747473 + 52747453 52747493 41 ATCACTTTGTGCAGCTTTATCGGGATGCTCTGGCAGGTAGG ATCACTTTGTGCAGCTTTATCCGGATGCTCTGGCAGGTAGG < 41bp 0.857880698728339 0.616731032724 0.940065 0.9140987 prediction 0.482299332008679 Functional Loss - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52747473 chr1:52747474 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_68732 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:52747458-52747488
64251 chr19 16791335 16791335 1 + G A PRAD 16791332 + 16791312 16791352 41 AGATCGCGGTGGGCATCCATCACGCCCATCACCACTACCAC AGATCGCGGTGGGCATCCATCACACCCATCACCACTACCAC < 41bp 0.761027691470062 0.519917868395242 0.80148804 0.31018975 prediction 0.48221964614964 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16791332 chr19:16791335 nonsynonymous SNV 0.745 4 24 hm5C_associated_SNPs_68739 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:16791333-16791366
64251 chr15 59911456 59911456 1 + G A STAD 59911453 + 59911433 59911473 41 CTGGGCCACCCTTCAGCGTGCACGGTGGATGCCTGGCTCTG CTGGGCCACCCTTCAGCGTGCACAGTGGATGCCTGGCTCTG < 41bp 0.757898172922933 0.516791799874677 0.55784184 0.20855099 prediction 0.482212746096512 Functional Loss - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911453 chr15:59911456 nonsynonymous SNV 0.323 2 24 hm5C_associated_SNPs_68742 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585664 chr15:59911440-59911460
64251 chr19 1077972 1077972 1 + G A rs144574686 1077969 + 1077949 1077989 41 GAGGAGGAGCAGGCTGGCAGCGCGCCGGGAGCAGGCAGCAC GAGGAGGAGCAGGCTGGCAGCGCACCGGGAGCAGGCAGCAC < 41bp 0.741070276689603 0.499351893853402 0.5970124 0.45567122 prediction 0.482140553379206 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1077969 chr19:1077972 synonymous SNV . 0 24 hm5C_associated_SNPs_68760 0 0 2 GRWD1 POSTAR2 ENCODE chr19:1077865-1077978
64251 chr11 86519058 86519058 1 + C T SKCM 86519056 + 86519036 86519076 41 CTCAGGGTCTTCAGGAAAGTCTCGAAGGAAGCGGCAGATTT CTCAGGGTCTTCAGGAAAGTCTTGAAGGAAGCGGCAGATTT < 41bp 0.836029912917568 0.594959664230328 0.9304835 0.37394628 prediction 0.48214049737448 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86519056 chr11:86519058 stopgain 0.754 1 23 hm5C_associated_SNPs_68761 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:86519040-86519060
64251 chr20 31606510 31606510 1 + G A rs183328639 31606507 + 31606487 31606527 41 TGCCACCCCTTTTGTGTTGCCAAGGCATGTGGGTACCGAGG TGCCACCCCTTTTGTGTTGCCAAAGCATGTGGGTACCGAGG < 41bp 0.741058333493403 0.494285995900573 0.18137178 0.19003394 prediction 0.482116666986807 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31606507 chr20:31606510 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68764 0 0 1 RPS3 POSTAR2 ENCODE chr20:31606509-31606547
64251 chr10 71266675 71266675 1 + G A rs74139176 71266672 + 71266652 71266692 41 TCACTGATGGGCTCCTGGGGCCCGGTGCCAAGCCCAGCGTG TCACTGATGGGCTCCTGGGGCCCAGTGCCAAGCCCAGCGTG < 41bp 0.761255137307462 0.520204843930873 0.48792386 0.2989691 prediction 0.482100586753178 Functional Loss - TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71266672 chr10:71266675 nonsynonymous SNV 0.028 0 24 hm5C_associated_SNPs_68769 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:71266657-71266699
64251 chr1 36291531 36291531 1 + T C COAD 36291530 + 36291510 36291550 41 CCTTCTCTGTTTGTTAGTATCTGCAACTGCTTTCTACCGGG CCTTCTCTGTTTGTTAGTATCCGCAACTGCTTTCTACCGGG < 41bp 0.746444227461104 0.505395310384521 0.73043776 0.2876504 prediction 0.482097834153167 Functional Loss - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36291530 chr1:36291531 synonymous SNV . 0 22 hm5C_associated_SNPs_68770 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:36291512-36291539
64251 chr1 249212453 249212453 1 + A T LUAD 249212449 + 249212429 249212469 41 TGATTGGGCACTGGATTATCCATCAGGACAAGAGGACCCGG TGATTGGGCACTGGATTATCCATCTGGACAAGAGGACCCGG < 41bp 0.741027403070767 0.417976231184811 0.11326876 0.1043669 prediction 0.482054806141534 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212449 chr1:249212453 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_68776 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:249212436-249212459
64251 chr3 183873497 183873497 1 + C T OV 183873495 + 183873475 183873515 41 CTTGTGAAGCTGCCCCTGCCCGCCGAGCGCGTCACCTTGGC CTTGTGAAGCTGCCCCTGCCCGTCGAGCGCGTCACCTTGGC < 41bp 0.744620363720777 0.503593023179598 0.8369647 0.22012433 prediction 0.482054681082358 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183873495 chr3:183873497 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_68777 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:183873480-183873505
64251 chr10 98741970 98741970 1 + C T LGG 98741968 + 98741948 98741988 41 AGGAGGTGGAGACGTTTCACCTCGAAAAGAACCTCAAGAGC AGGAGGTGGAGACGTTTCACCTTGAAAAGAACCTCAAGAGC < 41bp 0.80367124241909 0.562655960878255 0.9035203 0.1594486 prediction 0.482030563081671 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98741968 chr10:98741970 stopgain 0.002 0 23 hm5C_associated_SNPs_68782 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:98741958-98741985
64251 chr5 176078790 176078790 1 + G T LUAD 176078788 + 176078768 176078808 41 ACATCTCAGCGCTGACAGATCTGGGAGGCCTTGACCCCGTG ACATCTCAGCGCTGACAGATCTTGGAGGCCTTGACCCCGTG < 41bp 0.891836660668611 0.650821751609396 0.92389214 0.41396654 prediction 0.48202981811843 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176078788 chr5:176078790 synonymous SNV . 0 23 hm5C_associated_SNPs_68783 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr5:176078785-176078823
64251 chr2 86718162 86718162 1 + G A UCEC 86718159 + 86718139 86718179 41 CTTGGGGATGTGGTGTTTATCCCGGCAGGAGCTCCACATCA CTTGGGGATGTGGTGTTTATCCCAGCAGGAGCTCCACATCA < 41bp 0.741720825457547 0.500708217737804 0.91716623 0.9110757 prediction 0.482025215439487 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86718159 chr2:86718162 synonymous SNV . 0 24 hm5C_associated_SNPs_68785 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:86718145-86718180
64251 chr14 65381212 65381212 1 + C T UCEC 65381210 + 65381190 65381230 41 ACATTCCCTGTTGACTGCGTCGCGATGTGTGGCGACTGTGT ACATTCCCTGTTGACTGCGTCGTGATGTGTGGCGACTGTGT < 41bp 0.776419890467157 0.535407884536735 0.8905821 0.65735734 prediction 0.482024011860844 Functional Loss - CHURC1;CHURC1-FNTB ENSG00000125954;ENSG00000258289 CDS Human other chr14:65381210 chr14:65381212 nonsynonymous SNV 0.045 1 23 hm5C_associated_SNPs_68786 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr14:65381160-65381220
64251 chr15 67358628 67358628 1 + G T SARC 67358626 + 67358606 67358646 41 GGTCAAGAAACTCAAGAAGACGGGGCAGCTGGACGAGCTGG GGTCAAGAAACTCAAGAAGACGTGGCAGCTGGACGAGCTGG < 41bp 0.741010759643109 0.392182178802999 0.63457966 0.18199503 prediction 0.482021519286218 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67358626 chr15:67358628 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_68787 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:67358617-67358654
64251 chr19 4429577 4429577 1 + G A UCEC 4429574 + 4429554 4429594 41 ATAAGAAGACGGCACTCATCCGCGCGCGAGACCCCTGGGCC ATAAGAAGACGGCACTCATCCGCACGCGAGACCCCTGGGCC < 41bp 0.771038582530689 0.530033860289404 0.7643269 0.4526033 prediction 0.48200944448257 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4429574 chr19:4429577 nonsynonymous SNV 0.006 2 24 hm5C_associated_SNPs_68791 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4429555-4429594
64251 chr6 161519335 161519335 1 + C T LUAD 161519333 + 161519313 161519353 41 TCGGAGCATGCCTTCCGACGCGCGGAGCCATGGCAGCCCTG TCGGAGCATGCCTTCCGACGCGTGGAGCCATGGCAGCCCTG < 41bp 0.784391950871991 0.543390290117551 0.4312363 0.7235354 prediction 0.482003321508879 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519333 chr6:161519335 nonsynonymous SNV 0.473 4 23 hm5C_associated_SNPs_68792 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:161519307-161519340
64251 chr12 51634826 51634826 1 + T C rs57917280 51634825 + 51634805 51634845 41 GGTCCCATCTATCCACCTGGCTCCACAGTGCTGGTGGAAGG GGTCCCATCTATCCACCTGGCCCCACAGTGCTGGTGGAAGG < 41bp 0.814754528663945 0.573757711900732 0.6169523 0.10652113 prediction 0.481993633526425 Functional Loss - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51634825 chr12:51634826 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_68793 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:51634793-51634826
64251 chrX 118604885 118604885 1 + C T COAD 118604883 + 118604863 118604903 41 GCTGACATCATGTACACAGGCACGCTTGACTGCTGGCGGAA GCTGACATCATGTACACAGGCATGCTTGACTGCTGGCGGAA < 41bp 0.740991662846256 0.479503759481363 0.013678461 0.011885464 prediction 0.481983325692512 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118604883 chrX:118604885 nonsynonymous SNV 0.916 3 23 hm5C_associated_SNPs_68796 0 0 30 TARDBP POSTAR2 DRA001158,DRS012387 chrX:118604868-118605068
64251 chr1 205494290 205494290 1 + G T BRCA 205494288 + 205494268 205494308 41 CAGACATTGGCTTTGGGAAACTGGAAACATACGTGAAACTG CAGACATTGGCTTTGGGAAACTTGAAACATACGTGAAACTG < 41bp 0.740980634471963 0.411980830060891 0.22553432 0.31905586 prediction 0.481961268943927 Functional Loss - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205494288 chr1:205494290 synonymous SNV . 0 23 hm5C_associated_SNPs_68798 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:205494260-205494300
64251 chr2 203139892 203139892 1 + T C rs139075493 203139891 + 203139871 203139911 41 TTTATGGAAAGAATTTGAAACTCCAGAGAAAGCAAACAAAA TTTATGGAAAGAATTTGAAACCCCAGAGAAAGCAAACAAAA < 41bp 0.772754874095245 0.531774522680797 0.929363 0.18100211 prediction 0.481960702828896 Functional Loss - NOP58 ENSG00000055044 CDS Human protein_coding chr2:203139891 chr2:203139892 synonymous SNV . 0 22 hm5C_associated_SNPs_68799 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:203139833-203139896
64251 chr19 13056794 13056794 1 + A C LIHC 13056793 + 13056773 13056813 41 CCATCACGCTCAAAACGCTGCAGCAGCAGACCTTCAAGATC CCATCACGCTCAAAACGCTGCCGCAGCAGACCTTCAAGATC < 41bp 0.759590270983053 0.518612828896122 0.15688917 0.09442422 prediction 0.481954884173861 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13056793 chr19:13056794 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_68802 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13056680-13056800
64251 chr20 35862472 35862472 1 + C T OV 35862470 + 35862450 35862490 41 AACTTCACTTTTGCTCCTAGCACGATTATATTTCACCTGGG AACTTCACTTTTGCTCCTAGCATGATTATATTTCACCTGGG < 41bp 0.82743000262139 0.586455938547845 0.28636798 0.44663072 prediction 0.48194812814709 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35862470 chr20:35862472 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_68803 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:35862440-35862474
64251 chr5 147796566 147796566 1 + C T SKCM 147796564 + 147796544 147796584 41 GGTTTTGCCTTAGGGTTGTGCTCGAGTTGGTCTGAGTGCAG GGTTTTGCCTTAGGGTTGTGCTTGAGTTGGTCTGAGTGCAG < 41bp 0.844150514236315 0.60318141158001 0.24669752 0.13399261 prediction 0.481938205312608 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147796564 chr5:147796566 stopgain 1.000 1 23 hm5C_associated_SNPs_68806 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr5:147796561-147796587
64251 chr17 40937333 40937333 1 + G A READ 40937330 + 40937310 40937350 41 ACGCCTTCTTCCGCGAGGAGCGCGGTGTGCACGTGGAACTA ACGCCTTCTTCCGCGAGGAGCGCAGTGTGCACGTGGAACTA < 41bp 0.766588588535923 0.525620982681024 0.8485272 0.3776691 prediction 0.481935211709797 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40937330 chr17:40937333 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_68807 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:40937312-40937336
64251 chr10 127426930 127426930 1 + C T SKCM 127426928 + 127426908 127426948 41 TCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG TCCAGCAGCTGACCCCAGCACTTCAATCCCGTTAAAATATG < 41bp 0.74096374545665 0.434012097175061 0.9543816 0.40145838 prediction 0.4819274909133 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127426928 chr10:127426930 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_68808 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr10:127426911-127426932
64251 chr5 140502213 140502213 1 + C T LUAD 140502211 + 140502191 140502231 41 AGCCTGAGTTCAGCTTAACCCTCGTGGCGCTGGATGGTGGG AGCCTGAGTTCAGCTTAACCCTTGTGGCGCTGGATGGTGGG < 41bp 0.802674767382101 0.561717002408115 0.59086174 0.3874634 prediction 0.481915529947973 Functional Loss - PCDHB4 ENSG00000081818 CDS Human protein_coding chr5:140502211 chr5:140502213 synonymous SNV . 0 23 hm5C_associated_SNPs_68811 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:140502200-140502220
64251 chr2 219114098 219114098 1 + C T BLCA 219114096 + 219114076 219114116 41 TCCGCCTTCAGTGCTGTTCCCTCGTCACACCAATGCCAGTG TCCGCCTTCAGTGCTGTTCCCTTGTCACACCAATGCCAGTG < 41bp 0.740957713744079 0.456806813464685 0.10536742 0.049445152 prediction 0.481915427488159 Functional Loss - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219114096 chr2:219114098 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_68812 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:219114094-219114110
64251 chr6 3085621 3085621 1 + G A UCEC 3085618 + 3085598 3085638 41 AGCTCTGCTGGGAAGCGAATCCGGAAGCTCGGCCGACATTT AGCTCTGCTGGGAAGCGAATCCGAAAGCTCGGCCGACATTT < 41bp 0.758936060928746 0.517979712339213 0.8909374 0.1342091 prediction 0.481912697179066 Functional Loss - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3085618 chr6:3085621 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_68813 0 0 2 PRPF8 POSTAR2 ENCODE chr6:3085591-3085677
64251 chr1 231473811 231473811 1 + G C rs112263680 231473810 + 231473790 231473830 41 ACGTTGAGGTTTGAAATAACCGGCAAAGAGTAAAGGCTGAA ACGTTGAGGTTTGAAATAACCCGCAAAGAGTAAAGGCTGAA < 41bp 0.828967109530715 0.58804971441765 0.17329186 0.019153506 prediction 0.48183479022613 Functional Loss - SPRTN ENSG00000010072 UTR5 Human protein_coding chr1:231473810 chr1:231473811 . . 0 22 hm5C_associated_SNPs_68826 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:231473800-231473818
64251 chr12 113867071 113867071 1 + G T UCEC 113867069 + 113867049 113867089 41 TGCAGGTGGTGCAGAGGCTGCAGGGGGAGGGGGCCGAGGTT TGCAGGTGGTGCAGAGGCTGCATGGGGAGGGGGCCGAGGTT < 41bp 0.9030454666245 0.662131056562016 0.91030574 0.85660744 prediction 0.481828820124968 Functional Loss - SDSL ENSG00000139410 CDS Human protein_coding chr12:113867069 chr12:113867071 nonsynonymous SNV 0.624 2 23 hm5C_associated_SNPs_68827 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:113867064-113867095
64251 chr3 14172368 14172368 1 + T C UCEC 14172367 + 14172347 14172387 41 CATTGGCTGAGGGGCTCTCGCTTGTGGTGTCTCCCGACAGC CATTGGCTGAGGGGCTCTCGCCTGTGGTGTCTCCCGACAGC < 41bp 0.762240557793453 0.521334117202812 0.07453123 0.11350754 prediction 0.481812881181282 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14172367 chr3:14172368 nonsynonymous SNV 0.981 0 22 hm5C_associated_SNPs_68830 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:14172333-14172382
64251 chr22 25577681 25577681 1 + G T UCEC 25577679 + 25577659 25577699 41 GCAACAGAGGAGAAATCACCCAGGAAGGAGGAGTCGGATGA GCAACAGAGGAGAAATCACCCATGAAGGAGGAGTCGGATGA < 41bp 0.74090219452992 0.396300047398337 0.7764199 0.30094934 prediction 0.481804389059839 Functional Loss - KIAA1671 ENSG00000197077 CDS Human protein_coding chr22:25577679 chr22:25577681 nonsynonymous SNV 0.593 2 23 hm5C_associated_SNPs_68832 0 0 2 BUD13 POSTAR2 ENCODE chr22:25577658-25577700
64251 chr2 97427348 97427348 1 + C T UCEC 97427346 + 97427326 97427366 41 GCATATTTTCTGGCCTCAACCTCGGGCTTATGGCCCTGGAC GCATATTTTCTGGCCTCAACCTTGGGCTTATGGCCCTGGAC < 41bp 0.788449086199064 0.547548006393873 0.35255402 0.2056582 prediction 0.481802159610383 Functional Loss - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97427346 chr2:97427348 synonymous SNV . 0 23 hm5C_associated_SNPs_68833 0 0 1 RBM15 POSTAR2 ENCODE chr2:97427337-97427372
64251 chr17 41585853 41585853 1 + C T BLCA 41585851 + 41585831 41585871 41 TCTTCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTC TCTTCCCAGTGAGATGCAGACCTGAATCTTTGACCCAGCTC < 41bp 0.740889760741265 0.451456632686241 0.43527824 0.48621905 prediction 0.481779521482529 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585851 chr17:41585853 stopgain 1.000 1 23 hm5C_associated_SNPs_68838 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:41585837-41585875
64251 chr7 99649196 99649196 1 + G T rs151107460 99649193 + 99649173 99649213 41 CTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACGGCGCCG CTCCCAAAGTGCTGGAATTACAGTTGTGAGCCACGGCGCCG < 41bp 0.90769892387366 0.666809185223592 0.90161693 0.45720464 prediction 0.481779477300136 Functional Loss - ZSCAN21 ENSG00000166529 UTR5 Human protein_coding chr7:99649193 chr7:99649196 . . 0 24 hm5C_associated_SNPs_68839 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr7:99649195-99649196
64251 chr3 100057992 100057992 1 + C T LGG 100057990 + 100057970 100058010 41 TCAAATCAGATAACGTCACTCGCGCTTGTAGCTTCATCCGG TCAAATCAGATAACGTCACTCGTGCTTGTAGCTTCATCCGG < 41bp 0.796766777386532 0.555878342879989 0.08205554 0.1627019 prediction 0.481776869013085 Functional Loss - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100057990 chr3:100057992 synonymous SNV . 0 23 hm5C_associated_SNPs_68840 0 0 3 PPIG POSTAR2 ENCODE chr3:100057974-100058039
64251 chr16 3334003 3334003 1 + T C LIHC 3334002 + 3333982 3334022 41 CCCGGGAAGCCCTCAGCCGGCTCCAAGAGCTTTGCCATGGG CCCGGGAAGCCCTCAGCCGGCCCCAAGAGCTTTGCCATGGG < 41bp 0.740886168309355 0.484757704404967 0.8909527 0.15317029 prediction 0.48177233661871 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3334002 chr16:3334003 nonsynonymous SNV 0.977 2 22 hm5C_associated_SNPs_68841 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3334000-3334020
64251 chr16 3334004 3334004 1 + C T OV 3334002 + 3333982 3334022 41 CCCGGGAAGCCCTCAGCCGGCTCCAAGAGCTTTGCCATGGG CCCGGGAAGCCCTCAGCCGGCTTCAAGAGCTTTGCCATGGG < 41bp 0.740886168309355 0.470870659268792 0.8909527 0.26268658 prediction 0.48177233661871 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3334002 chr16:3334004 synonymous SNV . 0 23 hm5C_associated_SNPs_68842 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3334000-3334020
64251 chr2 118864725 118864725 1 + G T SARC 118864722 + 118864702 118864742 41 GTTACCATGTATATTTTTTGCTGGAGGCATAACAATGGGAA GTTACCATGTATATTTTTTGCTGTAGGCATAACAATGGGAA < 41bp 0.901249803613884 0.660369365581576 0.56820595 0.24613139 prediction 0.481760876064614 Functional Loss - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118864722 chr2:118864725 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_68844 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:118864721-118864738
64251 chr7 37988585 37988585 1 + C T SKCM 37988583 + 37988563 37988603 41 TCCACCTTTGAAGACCAGTACTCCATCGGGGGGCCTCAGGA TCCACCTTTGAAGACCAGTACTTCATCGGGGGGCCTCAGGA < 41bp 0.740871562167551 0.431170845191087 0.95330584 0.061351985 prediction 0.481743124335102 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37988583 chr7:37988585 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68846 0 0 4 NOL12 POSTAR2 ENCODE chr7:37988565-37988609
64251 chr20 35826857 35826857 1 + T C rs146315738 35826856 + 35826836 35826876 41 AGCAATGTGGATTCCCTCTTCTACGCTGCCCAGGCCAGCCA AGCAATGTGGATTCCCTCTTCCACGCTGCCCAGGCCAGCCA < 41bp 0.740862604237329 0.477320448838468 0.11763957 0.0829995 prediction 0.481725208474658 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35826856 chr20:35826857 nonsynonymous SNV 0.875 1 22 hm5C_associated_SNPs_68851 1 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:35826800-35826860
64251 chr6 26376398 26376398 1 + G A rs187102646 26376395 + 26376375 26376415 41 AGCTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCT AGCTTGCAGTGAGCCGAGATCACACCACTGCACTCCAGCCT < 41bp 0.740854645933071 0.497984991204508 0.55645955 0.3862186 prediction 0.481709291866142 Functional Loss - BTN3A2 ENSG00000186470 UTR3 Human protein_coding chr6:26376395 chr6:26376398 . . 0 24 hm5C_associated_SNPs_68854 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr6:26376380-26376400
64251 chr4 38893400 38893400 1 + G T LUAD 38893398 + 38893378 38893418 41 TCCAAGTGGAGGAGGATGGGCAGGCTGGGGATCCTGGGGCA TCCAAGTGGAGGAGGATGGGCATGCTGGGGATCCTGGGGCA < 41bp 0.740851405274445 0.382678305524346 0.6758039 0.6261195 prediction 0.481702810548891 Functional Loss - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38893398 chr4:38893400 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_68856 0 0 4 BUD13 POSTAR2 ENCODE chr4:38893350-38893407
64251 chr9 125746965 125746965 1 + G T UCEC 125746962 + 125746942 125746982 41 CATTAGTAGGGCTCCAAAAACCAGAGATGAGCCTACCAGTG CATTAGTAGGGCTCCAAAAACCATAGATGAGCCTACCAGTG < 41bp 0.740847637839935 0.361526786945144 0.8930714 0.51507574 prediction 0.481695275679869 Functional Loss - RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125746962 chr9:125746965 stopgain 1.000 1 24 hm5C_associated_SNPs_68861 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:125746959-125746999
64251 chr3 148744621 148744621 1 + G C OV 148744620 + 148744600 148744640 41 GGCACAGCCGTTTGTATCCTCGGAAGAACGGAAGGAACGAT GGCACAGCCGTTTGTATCCTCCGAAGAACGGAAGGAACGAT < 41bp 0.86688741873017 0.626041200840597 0.36349595 0.24277917 prediction 0.481692435779147 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148744620 chr3:148744621 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_68862 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:148744604-148744630
64251 chr1 220970141 220970141 1 + G T UCEC 220970138 + 220970118 220970158 41 ATAGCAGACTTGTTCCGACCCAAGGACCAGGTGAGAGGTTC ATAGCAGACTTGTTCCGACCCAATGACCAGGTGAGAGGTTC < 41bp 0.740846119226761 0.340744307945422 0.17361107 0.06435096 prediction 0.481692238453522 Functional Loss - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220970138 chr1:220970141 nonsynonymous SNV 0.049 0 24 hm5C_associated_SNPs_68863 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:220970117-220970142
64251 chr9 38396881 38396881 1 + A T LUSC 38396877 + 38396857 38396897 41 TAGGCTACATCCAGCTTGGCCAGAAGGAGGGCGCAAAACTC TAGGCTACATCCAGCTTGGCCAGATGGAGGGCGCAAAACTC < 41bp 0.740845190220339 0.426172571975011 0.45252392 0.6717118 prediction 0.481690380440678 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396877 chr9:38396881 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_68866 0 0 4 GRWD1 POSTAR2 ENCODE chr9:38396845-38396893
64251 chr9 38396879 38396879 1 + G T STAD 38396877 + 38396857 38396897 41 TAGGCTACATCCAGCTTGGCCAGAAGGAGGGCGCAAAACTC TAGGCTACATCCAGCTTGGCCATAAGGAGGGCGCAAAACTC < 41bp 0.740845190220339 0.40339494978056 0.45252392 0.09122479 prediction 0.481690380440678 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396877 chr9:38396879 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_68867 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:38396855-38396879
64251 chr19 5667130 5667130 1 + C T SKCM 5667128 + 5667108 5667148 41 GATGGCTGGGGGGGCTATGGCTCTGACAAGAGGATGAGCGA GATGGCTGGGGGGGCTATGGCTTTGACAAGAGGATGAGCGA < 41bp 0.740844589201399 0.465846971161736 0.60133713 0.5348132 prediction 0.481689178402798 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667128 chr19:5667130 nonsynonymous SNV 0.505 4 23 hm5C_associated_SNPs_68868 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5667099-5667132
64251 chr19 58904394 58904394 1 + G T UCEC 58904392 + 58904372 58904412 41 CAAGTACCTGCCTCACAGTGCAGGGCGGTATGCCGCCAAAC CAAGTACCTGCCTCACAGTGCATGGCGGTATGCCGCCAAAC < 41bp 0.740839018321283 0.384125391454847 0.78868836 0.36879146 prediction 0.481678036642567 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904392 chr19:58904394 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_68871 0 0 34 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904340-58904400
64251 chr22 50957143 50957143 1 + G A rs141300835 50957140 + 50957120 50957160 41 GCAGGAGCCCTGTCCCAGCACTCGGCTTCTCCCAGGAGCCA GCAGGAGCCCTGTCCCAGCACTCAGCTTCTCCCAGGAGCCA < 41bp 0.771118115605225 0.530290237767562 0.08429867 0.038087368 prediction 0.481655755675326 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957140 chr22:50957143 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_68878 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:50957110-50957144
64251 chr12 48172891 48172891 1 + G A OV 48172888 + 48172868 48172908 41 GGACCTGGCTCAAGGGGCTGCGCGGCTTCTTCTTCGTGGGC GGACCTGGCTCAAGGGGCTGCGCAGCTTCTTCTTCGTGGGC < 41bp 0.76672758096461 0.525900424301754 0.17470405 0.008779138 prediction 0.481654313325713 Functional Loss - SLC48A1 ENSG00000211584 CDS Human protein_coding chr12:48172888 chr12:48172891 nonsynonymous SNV 0.978 1 24 hm5C_associated_SNPs_68880 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:48172880-48172900
64251 chr10 1046703 1046703 1 + C T SKCM 1046701 + 1046681 1046721 41 CCATCACTGCCCTGGCCCACCTCCGTGCTGCGGTCCTGTAT CCATCACTGCCCTGGCCCACCTTCGTGCTGCGGTCCTGTAT < 41bp 0.844574976823458 0.603752984302476 0.7600885 0.1620411 prediction 0.481643985041963 Functional Loss - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1046701 chr10:1046703 synonymous SNV . 0 23 hm5C_associated_SNPs_68882 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr10:1046680-1046703
64251 chr10 20290821 20290821 1 + C T PAAD 20290819 + 20290799 20290839 41 GACTTTCTCAAGGCGGTAGACACGAACCGAGCAAGCGTCGG GACTTTCTCAAGGCGGTAGACATGAACCGAGCAAGCGTCGG < 41bp 0.819000380857016 0.578178781689248 0.38790074 0.49795532 prediction 0.481643198335535 Functional Loss - PLXDC2 ENSG00000120594 CDS Human protein_coding chr10:20290819 chr10:20290821 nonsynonymous SNV 0.009 3 23 hm5C_associated_SNPs_68883 0 0 2 BUD13 POSTAR2 ENCODE chr10:20290807-20290929
64251 chr10 105128238 105128238 1 + G T BLCA 105128236 + 105128216 105128256 41 GCCCTGCGGCCCCCGACCCTCCGGGCACTGGCGCTTCGGGG GCCCTGCGGCCCCCGACCCTCCTGGCACTGGCGCTTCGGGG < 41bp 0.905290844326686 0.664469540839985 0.8913176 0.23457938 prediction 0.481642606973401 Functional Loss - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128236 chr10:105128238 synonymous SNV . 0 23 hm5C_associated_SNPs_68884 0 0 1 FXR2 POSTAR2 ENCODE chr10:105128109-105128256
64251 chr16 29816292 29816292 1 + C T STAD 29816290 + 29816270 29816310 41 CGCAGTCTTCAGCGCATTGGCCCGAAGAAGGCCCAGCTAAT CGCAGTCTTCAGCGCATTGGCCTGAAGAAGGCCCAGCTAAT < 41bp 0.740818666306528 0.46736829606659 0.36906856 0.36264986 prediction 0.481637332613056 Functional Loss - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816290 chr16:29816292 nonsynonymous SNV 0.960 1 23 hm5C_associated_SNPs_68886 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:29816274-29816298
64251 chr19 14070879 14070879 1 + C T HNSC 14070877 + 14070857 14070897 41 CCCCCACTGAGGAGGGCCAGCTCCGGTGAGCGCGGGGATCC CCCCCACTGAGGAGGGCCAGCTTCGGTGAGCGCGGGGATCC < 41bp 0.740816638416495 0.480369415152064 0.80500615 0.69590706 prediction 0.481633276832991 Functional Loss - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070877 chr19:14070879 synonymous SNV . 0 23 hm5C_associated_SNPs_68887 0 0 1 SUPV3L1 POSTAR2 ENCODE chr19:14070876-14070962
64251 chr8 126021503 126021503 1 + T C UCEC 126021502 + 126021482 126021522 41 CCAGATTTCATCCAGTGAAACTCGAGTACTTGTTGACATTA CCAGATTTCATCCAGTGAAACCCGAGTACTTGTTGACATTA < 41bp 0.801804824701147 0.561000528499794 0.29494387 0.17039812 prediction 0.481608592402706 Functional Loss - SQLE ENSG00000104549 CDS Human protein_coding chr8:126021502 chr8:126021503 synonymous SNV . 0 22 hm5C_associated_SNPs_68890 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:126021493-126021558
64251 chr1 155103945 155103945 1 + G A LUSC 155103942 + 155103922 155103962 41 ACATACTGTACCTGGTGGAGCATGAGGAGTACCAGCTGTGC ACATACTGTACCTGGTGGAGCATAAGGAGTACCAGCTGTGC < 41bp 0.740802251332914 0.49356925778798 0.66221184 0.43467084 prediction 0.481604502665829 Functional Loss - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155103942 chr1:155103945 nonsynonymous SNV 0.926 3 24 hm5C_associated_SNPs_68891 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155103924-155103946
64251 chr17 20135686 20135686 1 + C T UCEC 20135684 + 20135664 20135704 41 AGCTGGGGGATGTGCAGGGCCACGGCAGGGTGGTCACCAGC AGCTGGGGGATGTGCAGGGCCATGGCAGGGTGGTCACCAGC < 41bp 0.740795754172619 0.481615715733068 0.6209306 0.47399312 prediction 0.481591508345238 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135684 chr17:20135686 synonymous SNV . 0 23 hm5C_associated_SNPs_68892 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:20135644-20135687
64251 chr2 203630305 203630305 1 + A C BLCA 203630304 + 203630284 203630324 41 CCTACCCCGGATCTTACACTCAAGGGCTCTGGCCACAGCCT CCTACCCCGGATCTTACACTCCAGGGCTCTGGCCACAGCCT < 41bp 0.740787945745267 0.489539296581161 0.9339626 0.65064704 prediction 0.481575891490533 Functional Loss - FAM117B ENSG00000138439 CDS Human protein_coding chr2:203630304 chr2:203630305 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_68894 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:203630248-203630363
64251 chr14 37132621 37132621 1 + C T STAD 37132619 + 37132599 37132639 41 GCGGCGGCCGCCAAGGTGCCCACGCCACCCGGGGTGCCTGC GCGGCGGCCGCCAAGGTGCCCATGCCACCCGGGGTGCCTGC < 41bp 0.740779812625857 0.495581246237362 0.530379 0.24583179 prediction 0.481559625251714 Functional Loss - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132619 chr14:37132621 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_68898 1 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:37132602-37132634
64251 chr19 44514831 44514831 1 + C T UCEC 44514829 + 44514809 44514849 41 TCAGAGCTCATGTCTGCAAACTCGTGAGAGAGTCCACACTG TCAGAGCTCATGTCTGCAAACTTGTGAGAGAGTCCACACTG < 41bp 0.805048798483743 0.564275000415833 0.13260254 0.08526546 prediction 0.48154759613582 Functional Loss - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514829 chr19:44514831 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_68901 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44514822-44514848
64251 chr9 133738212 133738212 1 + G C LUAD 133738208 + 133738188 133738228 41 CGAGTTGGTTCATCATCATTCAACGGTGGCCGACGGGCTCA CGAGTTGGTTCATCATCATTCAACCGTGGCCGACGGGCTCA < 41bp 0.740771141472246 0.445412624989602 0.35518432 0.18884593 prediction 0.481542282944491 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738208 chr9:133738212 synonymous SNV . 0 25 hm5C_associated_SNPs_68902 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:133738195-133738219
64251 chrX 43587532 43587532 1 + C T UCEC 43587530 + 43587510 43587550 41 GAAGCAGTGCGGGGGCACCACTCGGATATTCTCTGTCACCA GAAGCAGTGCGGGGGCACCACTTGGATATTCTCTGTCACCA < 41bp 0.82511619453156 0.584350493644624 0.46720424 0.48295972 prediction 0.481531401773873 Functional Loss - MAOA ENSG00000189221 CDS Human protein_coding chrX:43587530 chrX:43587532 nonsynonymous SNV 0.990 5 23 hm5C_associated_SNPs_68904 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chrX:43587524-43587544
64251 chr19 7975100 7975100 1 + G T LIHC 7975098 + 7975078 7975118 41 CGCCAGTGGGGGGCAGGGGGCGGTGGCAGAGGCCCCAGGGA CGCCAGTGGGGGGCAGGGGGCGTTGGCAGAGGCCCCAGGGA < 41bp 0.740763962263944 0.453076984618432 0.9331111 0.9300227 prediction 0.481527924527889 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975098 chr19:7975100 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_68905 0 0 4 DDX42 POSTAR2 ENCODE chr19:7975083-7975139
64251 chr19 31039147 31039147 1 + C T rs202224296 31039145 + 31039125 31039165 41 GGAGATCACTCGGGGCAGGCCACGGGCATGTCTTCGGAGGT GGAGATCACTCGGGGCAGGCCATGGGCATGTCTTCGGAGGT < 41bp 0.740754484978332 0.47198314536371 0.31979072 0.45581728 prediction 0.481508969956663 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039145 chr19:31039147 nonsynonymous SNV 0.049 0 23 hm5C_associated_SNPs_68909 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:31039140-31039160
64251 chr16 58552896 58552896 1 + A T rs547105426 58552892 + 58552872 58552912 41 CCTTACAGGTTCGCTATGGTCAGAAGATGATCTTACATCAG CCTTACAGGTTCGCTATGGTCAGATGATGATCTTACATCAG < 41bp 0.849267745320314 0.608524012494344 0.7752216 0.8415118 prediction 0.48148746565194 Functional Loss - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58552892 chr16:58552896 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_68914 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:58552886-58552916
64251 chr20 44421354 44421354 1 + G T SARC 44421352 + 44421332 44421372 41 TGATAAAGCACCGGCAGGTGCAGCGGAGGGGCCGCCGCTCA TGATAAAGCACCGGCAGGTGCATCGGAGGGGCCGCCGCTCA < 41bp 0.902728065230214 0.661986850969214 0.8873131 0.6189821 prediction 0.481482428522 Functional Loss - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44421352 chr20:44421354 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_68915 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:44421351-44421375
64251 chr1 32568262 32568262 1 + C T STAD 32568260 + 32568240 32568280 41 GCCCCCAGAGAGACCTGGACCACCGTTTCTCCTGAGCCCTG GCCCCCAGAGAGACCTGGACCATCGTTTCTCCTGAGCCCTG < 41bp 0.752747217644016 0.51200726373167 0.13124228 0.22181985 prediction 0.481479907824692 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32568260 chr1:32568262 synonymous SNV . 0 23 hm5C_associated_SNPs_68916 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:32568237-32568271
64251 chr1 7887408 7887408 1 + G A COAD 7887405 + 7887385 7887425 41 TGCCCAGCCAGGCCCCTTACCTCGTCCCAGCTTTTCCCCTC TGCCCAGCCAGGCCCCTTACCTCATCCCAGCTTTTCCCCTC < 41bp 0.763302849161734 0.522566327481889 0.17873988 0.21078002 prediction 0.48147304335969 Functional Loss - PER3 ENSG00000049246 CDS Human protein_coding chr1:7887405 chr1:7887408 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_68918 0 0 1 SF3B1 POSTAR2 ENCODE chr1:7887384-7887427
64251 chr19 12858298 12858298 1 + G T LUSC 12858295 + 12858275 12858315 41 ATCCAGGAGCTGGCCAAGTGCAAGATTGACACACACAATAT ATCCAGGAGCTGGCCAAGTGCAATATTGACACACACAATAT < 41bp 0.921232301768101 0.680495870871302 0.20075583 0.031193316 prediction 0.481472861793597 Functional Loss - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858295 chr19:12858298 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_68920 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr19:12858274-12858298
64251 chr16 28592443 28592443 1 + A T SKCM 28592439 + 28592419 28592459 41 TTGCAGAACTTCTCACAGAGCTCCATCAGCTGATCAAACAA TTGCAGAACTTCTCACAGAGCTCCTTCAGCTGATCAAACAA < 41bp 0.740734639685351 0.379404199214557 0.6000351 0.07719046 prediction 0.481469279370702 Functional Loss - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28592439 chr16:28592443 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_68921 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:28592408-28592445
64251 chrX 48436426 48436426 1 + G A rs3200611 48436423 + 48436403 48436443 41 AGGTTGCAGTGAGCTAAGATCGCGCCACTGTACTCCAGCCT AGGTTGCAGTGAGCTAAGATCGCACCACTGTACTCCAGCCT < 41bp 0.775546874905107 0.534816190088774 0.78885263 0.43268526 prediction 0.481461369632666 Functional Loss - RBM3 ENSG00000102317 UTR3 Human protein_coding chrX:48436423 chrX:48436426 . . 0 24 hm5C_associated_SNPs_68922 0 1 17 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48436399-48436467
64251 chr9 138395463 138395463 1 + C T PAAD 138395461 + 138395441 138395481 41 TGGAACAGACAGCCACGCACCTCCAGCTGGCCTTGAACTTC TGGAACAGACAGCCACGCACCTTCAGCTGGCCTTGAACTTC < 41bp 0.828452146354301 0.587726405716432 0.8991302 0.018978477 prediction 0.481451481275737 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395461 chr9:138395463 synonymous SNV . 0 23 hm5C_associated_SNPs_68925 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:138395440-138395520
64251 chr8 121215961 121215961 1 + G T TGCT 121215958 + 121215938 121215978 41 TCTGTGTAAGGGGTGAAAAACGCGGATGTGAATGAGCTGCA TCTGTGTAAGGGGTGAAAAACGCTGATGTGAATGAGCTGCA < 41bp 0.74072400199485 0.361065043494852 0.857793 0.24275711 prediction 0.4814480039897 Functional Loss - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121215958 chr8:121215961 synonymous SNV . 0 24 hm5C_associated_SNPs_68926 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:121215952-121215979
64251 chr20 58519916 58519916 1 + G A BLCA 58519913 + 58519893 58519933 41 AAGAGTACGAAGCTGCAGCGCTGGGATCTGTCCGGCAGTGG AAGAGTACGAAGCTGCAGCGCTGAGATCTGTCCGGCAGTGG < 41bp 0.742186630840598 0.50146615894783 0.17035452 0.14725247 prediction 0.481440943785537 Functional Loss - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519913 chr20:58519916 stopgain 0.002 0 24 hm5C_associated_SNPs_68927 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:58519892-58519922
64251 chr14 105878108 105878108 1 + G T SARC 105878105 + 105878085 105878125 41 CCAACGCCTTCCAGGCCTTCCTGGCGCGCAGTGCGCCTTTC CCAACGCCTTCCAGGCCTTCCTGTCGCGCAGTGCGCCTTTC < 41bp 0.740714885191092 0.347097347366575 0.4164582 0.21391657 prediction 0.481429770382183 Functional Loss - TEX22 ENSG00000226174 CDS Human protein_coding chr14:105878105 chr14:105878108 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_68929 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:105878103-105878137
64251 chr2 66691281 66691281 1 + G T UCEC 66691278 + 66691258 66691298 41 TCATGATGACACGGCATCTACTCGTTCAGGAGGAACCCCAG TCATGATGACACGGCATCTACTCTTTCAGGAGGAACCCCAG < 41bp 0.740713943058399 0.356550596036249 0.14528057 0.026153177 prediction 0.481427886116798 Functional Loss - MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66691278 chr2:66691281 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_68930 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:66691272-66691301
64251 chr5 137680774 137680774 1 + G T LUAD 137680772 + 137680752 137680792 41 GGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCCT GGACCTGTCTCGCTGGCAGCCGTTGTGGCGGCCCGCCCCCT < 41bp 0.740711059478665 0.375828746430458 0.8221003 0.69794667 prediction 0.481422118957331 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680772 chr5:137680774 nonsynonymous SNV 0.991 0 23 hm5C_associated_SNPs_68932 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr19 52819203 52819203 1 + G C SKCM 52819199 + 52819179 52819219 41 TCAGATGGGAGGGAGTGCATCAAAGGTGTGAACACAGGTAA TCAGATGGGAGGGAGTGCATCAAACGTGTGAACACAGGTAA < 41bp 0.740708228732181 0.46026391956143 0.7494402 0.25003844 prediction 0.481416457464362 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52819199 chr19:52819203 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_68933 0 0 1 LARP4 POSTAR2 ENCODE chr19:52819181-52819216
64251 chr14 24619513 24619513 1 + G T LUAD 24619511 + 24619491 24619531 41 GCCTAGAACCTGATCTTGCACGGGGTCGGTGGGCCTGCCAG GCCTAGAACCTGATCTTGCACGTGGTCGGTGGGCCTGCCAG < 41bp 0.899305361607913 0.658597981425371 0.9117344 0.79823744 prediction 0.481414760365084 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619511 chr14:24619513 synonymous SNV . 0 23 hm5C_associated_SNPs_68934 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24619475-24619533
64251 chr20 30193193 30193193 1 + G T BLCA 30193190 + 30193170 30193210 41 TTCAGCCAGTCGCCAAGAATCATGAAAGTCGCCAGTGGCAG TTCAGCCAGTCGCCAAGAATCATTAAAGTCGCCAGTGGCAG < 41bp 0.769172912838602 0.528465674163431 0.4862969 0.23133528 prediction 0.481414477350341 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193190 chr20:30193193 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_68935 0 0 7 BUD13 POSTAR2 ENCODE chr20:30193155-30193218
64251 chr19 19616204 19616204 1 + C T LUSC 19616202 + 19616182 19616222 41 CTGGCGGTGCACAAGAGCTCCTCGGCCGTGGACCGCCAGCG CTGGCGGTGCACAAGAGCTCCTTGGCCGTGGACCGCCAGCG < 41bp 0.740692048303513 0.483254449074579 0.3434619 0.26257446 prediction 0.481384096607025 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19616202 chr19:19616204 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_68942 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:19616179-19616218
64251 chr19 50098694 50098694 1 + G T READ 50098692 + 50098672 50098712 41 CCGGGCCACGGGCCCTGAGGCAGCAGGGGGCGGTGGGGCTG CCGGGCCACGGGCCCTGAGGCATCAGGGGGCGGTGGGGCTG < 41bp 0.890269813249828 0.649588671944521 0.8871677 0.8574698 prediction 0.481362282610614 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50098692 chr19:50098694 nonsynonymous SNV 0.136 0 23 hm5C_associated_SNPs_68945 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:50098690-50098730
64251 chr2 241569821 241569821 1 + G A rs553719886 241569818 + 241569798 241569838 41 GGTCATCGGCTCCCTGGTGGCTCGCTGGCTCCTGGGGATTC GGTCATCGGCTCCCTGGTGGCTCACTGGCTCCTGGGGATTC < 41bp 0.758132146787379 0.517452269495084 0.12469953 0.16492406 prediction 0.481359754584589 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569818 chr2:241569821 nonsynonymous SNV 0.102 2 24 hm5C_associated_SNPs_68947 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241569799-241569831
64251 chr17 16203244 16203244 1 + C T HNSC 16203242 + 16203222 16203262 41 GCATGCAGTGGGACACAGAGCACGTGGCCAGAGTCCTCCTT GCATGCAGTGGGACACAGAGCATGTGGCCAGAGTCCTCCTT < 41bp 0.803378504212902 0.562700042694743 0.25270748 0.22556248 prediction 0.481356923036317 Functional Loss - PIGL ENSG00000108474 CDS Human protein_coding chr17:16203242 chr17:16203244 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_68949 0 0 1 PPIG POSTAR2 ENCODE chr17:16203199-16203309
64251 chr11 68350579 68350579 1 + G T UCEC 68350577 + 68350557 68350597 41 TTAAAGAAACGGGTTTCTCACAGGATTCTTCTTTGCAGCAA TTAAAGAAACGGGTTTCTCACATGATTCTTCTTTGCAGCAA < 41bp 0.864442027971919 0.623764691047579 0.90244406 0.2862992 prediction 0.481354673848679 Functional Loss - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68350577 chr11:68350579 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_68951 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:68350541-68350586
64251 chr5 145317736 145317736 1 + C T SKCM 145317734 + 145317714 145317754 41 GGAGTGCGCTCAGGGCAGAGCTCCGGGAGAGGGGGCTCCTT GGAGTGCGCTCAGGGCAGAGCTTCGGGAGAGGGGGCTCCTT < 41bp 0.740673764760128 0.495446413776547 0.91236794 0.91615033 prediction 0.481347529520256 Functional Loss - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145317734 chr5:145317736 nonsynonymous SNV 0.051 0 23 hm5C_associated_SNPs_68955 0 0 1 SRSF1 POSTAR2 ENCODE chr5:145317681-145317844
64251 chr6 43400685 43400685 1 + G A rs140348023 43400682 + 43400662 43400702 41 AGGGGCAGGAGCCACTAAGCCACGGCCTGCTCTATGCTCTG AGGGGCAGGAGCCACTAAGCCACAGCCTGCTCTATGCTCTG < 41bp 0.763406475415978 0.522738190367901 0.61188126 0.11882648 prediction 0.481336570096152 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43400682 chr6:43400685 nonsynonymous SNV 0.462 5 24 hm5C_associated_SNPs_68957 0 0 2 RBM15 POSTAR2 ENCODE chr6:43400617-43400695
64251 chr11 64088252 64088252 1 + G T rs142314160 64088249 + 64088229 64088269 41 GGCGAGTGGGGCCGAGCCCACAAGGCGGAAGGCAAGGTGAG GGCGAGTGGGGCCGAGCCCACAATGCGGAAGGCAAGGTGAG < 41bp 0.740665784284845 0.338430575931022 0.88801956 0.44145694 prediction 0.481331568569689 Functional Loss - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64088249 chr11:64088252 nonsynonymous SNV 0.900 0 24 hm5C_associated_SNPs_68960 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64088227-64088261
64251 chr19 17611419 17611419 1 + G A rs188376321 17611416 + 17611396 17611436 41 ATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCT ATCGCCCACAGCGTCTTCAGCAAAGGCGACAGCGCCTACCT < 41bp 0.778516619492268 0.537851441501619 0.9247837 0.8226286 prediction 0.481330355981299 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17611416 chr19:17611419 synonymous SNV . 0 24 hm5C_associated_SNPs_68961 0 0 1 PPIG POSTAR2 ENCODE chr19:17611410-17611476
64251 chr17 38991475 38991475 1 + C T BRCA 38991473 + 38991453 38991493 41 TGGCAAAGCCTCATATTACTCTCTAGTCTGGTTCAGCAGGA TGGCAAAGCCTCATATTACTCTTTAGTCTGGTTCAGCAGGA < 41bp 0.806659864629569 0.566007332859537 0.7362322 0.12511158 prediction 0.481305063540064 Functional Loss - TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38991473 chr17:38991475 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_68964 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:38991454-38991478
64251 chr19 35510426 35510426 1 + G A rs147684177 35510423 + 35510403 35510443 41 ATCCTGGGTCTGGCCCGGAACAAGGCGCGGCTCCGGTGAGT ATCCTGGGTCTGGCCCGGAACAAAGCGCGGCTCCGGTGAGT < 41bp 0.772919346098 0.53227615192678 0.90889084 0.6316828 prediction 0.481286388342438 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510423 chr19:35510426 synonymous SNV . 0 24 hm5C_associated_SNPs_68969 0 0 1 PRPF8 POSTAR2 ENCODE chr19:35510419-35510488
64251 chr15 42120356 42120356 1 + G C SARC 42120355 + 42120335 42120375 41 GCTTTGGAAGCCGTGCGGAGCGAGTTACGAGAATTCCCGGC GCTTTGGAAGCCGTGCGGAGCCAGTTACGAGAATTCCCGGC < 41bp 0.740641094136918 0.431149281707494 0.7507076 0.65142524 prediction 0.481282188273836 Functional Loss - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42120355 chr15:42120356 nonsynonymous SNV 0.286 0 22 hm5C_associated_SNPs_68970 0 0 1 PPIG POSTAR2 ENCODE chr15:42120353-42120386
64251 chr2 201436466 201436466 1 + A C STAD 201436465 + 201436445 201436485 41 AGATGAATGAACAGCTGGCTCAGGTGAATGAACTAAAGAAA AGATGAATGAACAGCTGGCTCCGGTGAATGAACTAAAGAAA < 41bp 0.7418659579753 0.501228369487306 0.50538933 0.23189443 prediction 0.481275176975988 Functional Loss - SGO2 ENSG00000163535 CDS Human protein_coding chr2:201436465 chr2:201436466 nonsynonymous SNV 0.005 2 22 hm5C_associated_SNPs_68971 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:201436450-201436515
64251 chrX 149809756 149809756 1 + C T UCEC 149809754 + 149809734 149809774 41 CCTCACAGGGCTTGCCCAATCACCATTGGAGAATAACTTTT CCTCACAGGGCTTGCCCAATCATCATTGGAGAATAACTTTT < 41bp 0.843380028472104 0.602746570308993 0.0438326 0.03309703 prediction 0.481266916326221 Functional Loss - MTM1 ENSG00000171100 CDS Human protein_coding chrX:149809754 chrX:149809756 synonymous SNV . 0 23 hm5C_associated_SNPs_68973 0 0 1 PPIG POSTAR2 ENCODE chrX:149809739-149809765
64251 chr1 46073489 46073489 1 + G A rs2230657 46073486 + 46073466 46073506 41 GTAGAAGCAGAGTCTTTAGACCCGACAGTCAAGCCAGTGGA GTAGAAGCAGAGTCTTTAGACCCAACAGTCAAGCCAGTGGA < 41bp 0.741780173631587 0.501169341113404 0.20483634 0.13723582 prediction 0.481221665036367 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073486 chr1:46073489 synonymous SNV . 0 24 hm5C_associated_SNPs_68979 0 1 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46073410-46073491
64251 chr3 45072372 45072372 1 + G A UCEC 45072369 + 45072349 45072389 41 TCAAGAGCCGTCTGGACACCCTGGCCCAGGAGGTGGCCCTG TCAAGAGCCGTCTGGACACCCTGACCCAGGAGGTGGCCCTG < 41bp 0.740604397591104 0.498785325206306 0.31329685 0.08733985 prediction 0.481208795182207 Functional Loss - CLEC3B ENSG00000163815 CDS Human protein_coding chr3:45072369 chr3:45072372 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_68981 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:45072350-45072378
64251 chr5 148682070 148682070 1 + T C LIHC 148682069 + 148682049 148682089 41 TCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCACA TCTGGGACCCGGCAAGTCGCCCGAGTACATCAGCTCCCACA < 41bp 0.747116680771291 0.50652180344855 0.124209404 0.2164886 prediction 0.481189754645483 Functional Loss - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148682069 chr5:148682070 synonymous SNV . 0 22 hm5C_associated_SNPs_68986 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:148682035-148682089
64251 chr7 86813796 86813796 1 + C T BLCA 86813794 + 86813774 86813814 41 TGAGCCAGGTGACATAGTCACACAGGGTGTGTCTTGGGCAG TGAGCCAGGTGACATAGTCACATAGGGTGTGTCTTGGGCAG < 41bp 0.812396292109414 0.571803598194546 0.41688552 0.7129771 prediction 0.481185387829737 Functional Loss - DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86813794 chr7:86813796 stopgain 1.000 1 23 hm5C_associated_SNPs_68988 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:86813710-86813812
64251 chr6 26217264 26217264 1 + G T CESC 26217261 + 26217241 26217281 41 AAAAGCTAAAACGCGTTCTTCCAGGGCCGGTCTTCAGTTTC AAAAGCTAAAACGCGTTCTTCCATGGCCGGTCTTCAGTTTC < 41bp 0.740586272019789 0.361004141521723 0.88415456 0.80222595 prediction 0.481172544039579 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217261 chr6:26217264 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_68989 0 0 2 RPS3 POSTAR2 ENCODE chr6:26217256-26217307
64251 chr17 41365910 41365910 1 + C T UCEC 41365908 + 41365888 41365928 41 CAGAGGCTGAAGCCCAAGCACACGTAAGCCCCCCTTCCTCC CAGAGGCTGAAGCCCAAGCACATGTAAGCCCCCCTTCCTCC < 41bp 0.786046731600643 0.545467950228018 0.20906535 0.26785964 prediction 0.481157562745251 Functional Loss - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41365908 chr17:41365910 nonsynonymous SNV 0.859 4 23 hm5C_associated_SNPs_68991 0 0 1 PRPF8 POSTAR2 ENCODE chr17:41365857-41365986
64251 chr22 50962076 50962076 1 + C T UCEC 50962074 + 50962054 50962094 41 TGCGGAAAGCCGCCATGTGCCGCCGCACACTGTCTGAGATC TGCGGAAAGCCGCCATGTGCCGTCGCACACTGTCTGAGATC < 41bp 0.740573620040073 0.494574037105165 0.09031111 0.015574843 prediction 0.481147240080146 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962074 chr22:50962076 synonymous SNV . 0 23 hm5C_associated_SNPs_68995 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:50962063-50962101
64251 chr16 2578249 2578249 1 + G A READ 2578246 + 2578226 2578266 41 CCCCTGCCCAGTTCCACCACCGCGACCCAGGCATCGTGGGG CCCCTGCCCAGTTCCACCACCGCAACCCAGGCATCGTGGGG < 41bp 0.740565621839988 0.499718333670978 0.20115274 0.20803052 prediction 0.481131243679977 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578246 chr16:2578249 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_68998 0 0 5 BUD13 POSTAR2 ENCODE chr16:2578216-2578296
64251 chr19 36122274 36122274 1 + G T UCEC 36122271 + 36122251 36122291 41 ATCGGAGTCACCTGGACAGCCCAGAGGCTCGAGAAGCCATG ATCGGAGTCACCTGGACAGCCCATAGGCTCGAGAAGCCATG < 41bp 0.740564900440541 0.343121047792898 0.21441135 0.08837134 prediction 0.481129800881083 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36122271 chr19:36122274 stopgain 0.999 0 24 hm5C_associated_SNPs_68999 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36122262-36122274
64251 chr14 105911845 105911845 1 + G A UCEC 105911842 + 105911822 105911862 41 TCATCGCCCTGGCCGACAAGCACGCAAGTGAGTCCGGCCTT TCATCGCCCTGGCCGACAAGCACACAAGTGAGTCCGGCCTT < 41bp 0.755797945700211 0.515237195083186 0.22666147 0.13141462 prediction 0.48112150123405 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105911842 chr14:105911845 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_69002 0 0 6 DDX24 POSTAR2 ENCODE chr14:105911754-105911846
64251 chr1 32542820 32542820 1 + G A COAD 32542817 + 32542797 32542837 41 CTCCATCCTGCTGTTCCTCACTCGCTTCACCGTTCTCACGG CTCCATCCTGCTGTTCCTCACTCACTTCACCGTTCTCACGG < 41bp 0.740560501553618 0.497012864946662 0.36274624 0.11435777 prediction 0.481121003107235 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32542817 chr1:32542820 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_69003 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:32542800-32542820
64251 chr14 20925201 20925201 1 + C T BLCA 20925199 + 20925179 20925219 41 GTGATTGTGGCTGAATTTGACTCGTTTGTGCTGGTAACAGC GTGATTGTGGCTGAATTTGACTTGTTTGTGCTGGTAACAGC < 41bp 0.809824693368073 0.569269628790259 0.3655541 0.20373616 prediction 0.481110129155628 Functional Loss - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20925199 chr14:20925201 nonsynonymous SNV 0.505 0 23 hm5C_associated_SNPs_69006 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr14:20925155-20925289
64251 chr7 76121570 76121570 1 + G T LUSC 76121568 + 76121548 76121588 41 CAGAGTCCAGCAGGCGCTCGCAGGTAGGTGCCTGACCTCGG CAGAGTCCAGCAGGCGCTCGCATGTAGGTGCCTGACCTCGG < 41bp 0.740544985277412 0.385477573278885 0.8997159 0.6686626 prediction 0.481089970554824 Functional Loss - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76121568 chr7:76121570 stopgain 0.872 2 23 hm5C_associated_SNPs_69009 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:76121539-76121616
64251 chr11 65631116 65631116 1 + C T UCEC 65631114 + 65631094 65631134 41 TCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGC TCCGAGAGCTACAGCGGCTGCATGTGACCCACACGGTGCGC < 41bp 0.796808366719404 0.556265459109156 0.4045058 0.26098058 prediction 0.481085815220496 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631114 chr11:65631116 synonymous SNV . 0 23 hm5C_associated_SNPs_69011 0 0 11 AGGF1 POSTAR2 ENCODE chr11:65631054-65631119
64251 chr17 42225860 42225860 1 + T C COAD 42225859 + 42225839 42225879 41 TGTCCGCCCAGGATGAGTCTCTAGATCCTGTCATCCAATGT TGTCCGCCCAGGATGAGTCTCCAGATCCTGTCATCCAATGT < 41bp 0.759726658982655 0.519188433429062 0.16851962 0.38972074 prediction 0.481076451107187 Functional Loss - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225859 chr17:42225860 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_69013 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:42225842-42225866
64251 chr2 219292714 219292714 1 + G A UCEC 219292711 + 219292691 219292731 41 CCGGAAAGGGGGCGTGGCTTCTGGCATGAAGCACGTGGAGA CCGGAAAGGGGGCGTGGCTTCTGACATGAAGCACGTGGAGA < 41bp 0.740533355134575 0.493708327438222 0.3927471 0.1952672 prediction 0.481066710269151 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292711 chr2:219292714 nonsynonymous SNV 0.040 3 24 hm5C_associated_SNPs_69014 0 0 4 BUD13 POSTAR2 ENCODE chr2:219292685-219292717
64251 chr10 54074812 54074812 1 + G A UCEC 54074809 + 54074789 54074829 41 GCCGAAAACGCTGCATGCGTCACGCTATGTGCTGCCCCGGG GCCGAAAACGCTGCATGCGTCACACTATGTGCTGCCCCGGG < 41bp 0.743899916879791 0.503368034067807 0.2656945 0.053855896 prediction 0.481063765623968 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074809 chr10:54074812 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_69015 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074800-54074820
64251 chr5 145838567 145838567 1 + G A CESC 145838564 + 145838544 145838584 41 CCCAGGCACAGGTTCAGGCTCAGGCCCAGGCGCAGGCTCAG CCCAGGCACAGGTTCAGGCTCAGACCCAGGCGCAGGCTCAG < 41bp 0.755826847734287 0.515297453553015 0.40671715 0.11076611 prediction 0.481058788362543 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838564 chr5:145838567 nonsynonymous SNV 0.914 0 24 hm5C_associated_SNPs_69016 0 0 1 XPO5 POSTAR2 ENCODE chr5:145838564-145838643
64251 chr11 65305955 65305955 1 + G C LUAD 65305954 + 65305934 65305974 41 CCCGGAAGAAGCGCGAGGAGCGGCGGCGGGAGATGGAGGCC CCCGGAAGAAGCGCGAGGAGCCGCGGCGGGAGATGGAGGCC < 41bp 0.861418814343009 0.62090215696541 0.9028053 0.7742436 prediction 0.481033314755198 Functional Loss - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65305954 chr11:65305955 nonsynonymous SNV 0.807 4 22 hm5C_associated_SNPs_69019 0 0 7 GRWD1 POSTAR2 ENCODE chr11:65305918-65305991
64251 chr12 7310610 7310610 1 + C T rs146012265 7310608 + 7310588 7310628 41 GAGGATGAGGACAGCAGTGACTCGGAGGTGGCCGATTCCCC GAGGATGAGGACAGCAGTGACTTGGAGGTGGCCGATTCCCC < 41bp 0.740516034653038 0.477052949171791 0.19187266 0.29639283 prediction 0.481032069306075 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7310608 chr12:7310610 nonsynonymous SNV 0.949 0 23 hm5C_associated_SNPs_69020 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:7310600-7310620
64251 chr17 9631616 9631616 1 + C T BLCA 9631614 + 9631594 9631634 41 CCAGCCGGGGTGCCCTGTCCCTCGGCTCAACCCAACCACTG CCAGCCGGGGTGCCCTGTCCCTTGGCTCAACCCAACCACTG < 41bp 0.774753732099734 0.534247107206752 0.2157704 0.15716633 prediction 0.481013249785964 Functional Loss - USP43 ENSG00000154914 CDS Human protein_coding chr17:9631614 chr17:9631616 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_69023 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:9631610-9631644
64251 chr19 34884674 34884674 1 + A C rs143733383 34884670 + 34884650 34884690 41 CAGCTGCTCTCGGGGGCTCACTGGATGGTGAGTGCTGAGGC CAGCTGCTCTCGGGGGCTCACTGGCTGGTGAGTGCTGAGGC < 41bp 0.930247600870713 0.689743469220451 0.9317881 0.36631078 prediction 0.481008263300523 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34884670 chr19:34884674 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_69024 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:34884636-34884674
64251 chr10 60145342 60145342 1 + G C rs1937 60145338 + 60145318 60145358 41 TCCGAAGCATGTGGGGCGTGCTGAGTGCCCTGGGAAGGTCT TCCGAAGCATGTGGGGCGTGCTGACTGCCCTGGGAAGGTCT < 41bp 0.740483663694863 0.45806295259984 0.70598096 0.67546237 prediction 0.480967327389725 Functional Loss - TFAM ENSG00000108064 CDS Human protein_coding chr10:60145338 chr10:60145342 nonsynonymous SNV 0.304 0 25 hm5C_associated_SNPs_69033 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:60145320-60145360
64251 chr19 56925439 56925439 1 + A T LUSC 56925435 + 56925415 56925455 41 AAAGTGATGTTGGAGAACTACAGGAGCTTGGTATCATTGGG AAAGTGATGTTGGAGAACTACAGGTGCTTGGTATCATTGGG < 41bp 0.861054277499941 0.620571902877829 0.7537132 0.7141274 prediction 0.480964749244225 Functional Loss - ZNF583 ENSG00000198440 CDS Human protein_coding chr19:56925435 chr19:56925439 nonsynonymous SNV 0.012 1 25 hm5C_associated_SNPs_69034 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:56925420-56925445
64251 chr11 44130799 44130799 1 + G T UCEC 44130796 + 44130776 44130816 41 ACATGTTGCCTGGAGGTCCCCCAGATTATAACACAGCCCTG ACATGTTGCCTGGAGGTCCCCCATATTATAACACAGCCCTG < 41bp 0.740471648616334 0.342721842441025 0.13598984 0.12804243 prediction 0.480943297232668 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44130796 chr11:44130799 nonsynonymous SNV 0.869 5 24 hm5C_associated_SNPs_69036 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:44130799-44130827
64251 chr12 6646823 6646823 1 + G T CESC 6646821 + 6646801 6646841 41 GGGAAACTGTGGCGTGATGGCCGCGGGGCTCTCCAGAACAT GGGAAACTGTGGCGTGATGGCCTCGGGGCTCTCCAGAACAT < 41bp 0.740465828341916 0.389624796932235 0.1521982 0.066204995 prediction 0.480931656683833 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646821 chr12:6646823 nonsynonymous SNV 0.863 2 23 hm5C_associated_SNPs_69039 0 0 47 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr12:6646779-6646849
64251 chr16 81069691 81069691 1 + G C rs200817365 81069687 + 81069667 81069707 41 GGCGGGGGAGCTGATCCAGCCGTCGGTGAGCGAGCTGTCCC GGCGGGGGAGCTGATCCAGCCGTCCGTGAGCGAGCTGTCCC < 41bp 0.814921049389657 0.574460273080222 0.49427754 0.3881703 prediction 0.480921552618871 Functional Loss - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81069687 chr16:81069691 synonymous SNV . 0 25 hm5C_associated_SNPs_69040 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr16:81069679-81069721
64251 chr1 151372652 151372652 1 + C T rs11557389 151372650 + 151372630 151372670 41 TCCAGTATTTGAAGCAAGTTCTCGGCCAGATGGTGTAAGTC TCCAGTATTTGAAGCAAGTTCTTGGCCAGATGGTGTAAGTC < 41bp 0.811790552464395 0.571342867838879 0.28046417 0.1503742 prediction 0.480895369251031 Functional Loss - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151372650 chr1:151372652 synonymous SNV . 0 23 hm5C_associated_SNPs_69047 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151372634-151372653
64251 chr19 49517793 49517793 1 + G A COAD 49517790 + 49517770 49517810 41 ACGGCATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTC ACGGCATCCCCATAGACCTGCTGAACCGGCTGCTTATCGTC < 41bp 0.741861320028122 0.501417318246654 0.074180365 0.0327003 prediction 0.480888003562937 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517790 chr19:49517793 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_69048 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49517755-49517804
64251 chr7 102939145 102939145 1 + C T BLCA 102939143 + 102939123 102939163 41 GCTTCGGAAGACTCTGGGCTCTCAACATGCACAGTAAGTGA GCTTCGGAAGACTCTGGGCTCTTAACATGCACAGTAAGTGA < 41bp 0.740434201375199 0.460314285505867 0.08289209 0.06590903 prediction 0.480868402750398 Functional Loss - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102939143 chr7:102939145 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_69053 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:102939106-102939145
64251 chr7 127229646 127229646 1 + C T LUSC 127229644 + 127229624 127229664 41 GCGGCACTACTTCCAGAACACTCAGGTGGAGTGTTGGGAGG GCGGCACTACTTCCAGAACACTTAGGTGGAGTGTTGGGAGG < 41bp 0.817159499447906 0.576728035231059 0.4246249 0.46085778 prediction 0.480862928433694 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127229644 chr7:127229646 stopgain 0.999 1 23 hm5C_associated_SNPs_69054 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:127229624-127229648
64251 chr1 118495266 118495266 1 + T C UCEC 118495265 + 118495245 118495285 41 GAACAAGGGAGCCTCTTATTCTTGAGGAAGAAAGGGAGATG GAACAAGGGAGCCTCTTATTCCTGAGGAAGAAAGGGAGATG < 41bp 0.754309895110448 0.513890362434939 0.33613676 0.43305093 prediction 0.48083906535102 Functional Loss - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118495265 chr1:118495266 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_69061 0 0 1 EWSR1 POSTAR2 SRX029344 chr1:118495245-118495268
64251 chr11 114182871 114182871 1 + C T HNSC 114182869 + 114182849 114182889 41 CTGGGGGCCGTCCCCTTACCCCCGGCTGACTGCGTGCTCAG CTGGGGGCCGTCCCCTTACCCCTGGCTGACTGCGTGCTCAG < 41bp 0.791795291687146 0.551375760619122 0.84882104 0.2859562 prediction 0.480839062136048 Functional Loss - NNMT ENSG00000166741 CDS Human protein_coding chr11:114182869 chr11:114182871 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_69062 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:114182861-114182879
64251 chr16 2256181 2256181 1 + G T SARC 2256179 + 2256159 2256199 41 CGCTTCTGGCAGGCCCACAGCGGCATCTGCACCCGGACGGT CGCTTCTGGCAGGCCCACAGCGTCATCTGCACCCGGACGGT < 41bp 0.877179758020058 0.636764979005008 0.70169044 0.059085578 prediction 0.480829558030101 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2256179 chr16:2256181 nonsynonymous SNV 0.923 4 23 hm5C_associated_SNPs_69063 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2256147-2256193
64251 chr1 29609223 29609223 1 + G A STAD 29609220 + 29609200 29609240 41 GATTGTGGAGGAGGAGCGGGCGCGGAGGCTGCGGCGGGAGC GATTGTGGAGGAGGAGCGGGCGCAGAGGCTGCGGCGGGAGC < 41bp 0.747787618011062 0.507385501390943 0.87885916 0.74911976 prediction 0.480804233240238 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29609220 chr1:29609223 nonsynonymous SNV 0.319 0 24 hm5C_associated_SNPs_69065 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:29609200-29609255
64251 chr2 241537444 241537444 1 + C T UCEC 241537442 + 241537422 241537462 41 GGCACCTACAAGGTTGTGCCCTCCACCTACCTGCCGGACAC GGCACCTACAAGGTTGTGCCCTTCACCTACCTGCCGGACAC < 41bp 0.815198962293311 0.574797283649396 0.9050841 0.3250513 prediction 0.48080335728783 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241537442 chr2:241537444 nonsynonymous SNV 0.930 5 23 hm5C_associated_SNPs_69066 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241537434-241537464
64251 chr12 123463812 123463812 1 + C T rs34010146 123463810 + 123463790 123463830 41 GTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGATGAG GTCCCATGTGCTGCCGTGAGCCTGACCTGGTGGACGATGAG < 41bp 0.740400172135059 0.495462059075023 0.094215006 0.06381494 prediction 0.480800344270118 Functional Loss - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463810 chr12:123463812 synonymous SNV . 0 23 hm5C_associated_SNPs_69067 0 0 3 NONO POSTAR2 ENCODE chr12:123463763-123463829
64251 chr20 55982776 55982776 1 + G A UCEC 55982773 + 55982753 55982793 41 CCATACGCCGCCTCGCCTGCCACGGCTGCCAGCTTCGTGGG CCATACGCCGCCTCGCCTGCCACAGCTGCCAGCTTCGTGGG < 41bp 0.740944499346401 0.500550119323973 0.46308511 0.29834765 prediction 0.480788760044855 Functional Loss - RBM38 ENSG00000132819 CDS Human protein_coding chr20:55982773 chr20:55982776 synonymous SNV . 0 24 hm5C_associated_SNPs_69068 0 0 2 IGF2BP2 POSTAR2 ENCODE chr20:55982748-55982803
64251 chr11 74907651 74907651 1 + G A UCEC 74907648 + 74907628 74907668 41 CCCTGTCTGCGACCCCAGCACTCGTGTGGAATACATCACAC CCCTGTCTGCGACCCCAGCACTCATGTGGAATACATCACAC < 41bp 0.764875048316099 0.524483488547408 0.15113205 0.07811937 prediction 0.480783119537383 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74907648 chr11:74907651 nonsynonymous SNV 0.137 0 24 hm5C_associated_SNPs_69069 0 0 1 PPIG POSTAR2 ENCODE chr11:74907620-74907704
64251 chr13 113803420 113803420 1 + G A UCEC 113803417 + 113803397 113803437 41 GAGCGTGACTGGGCCGAGTCCACGCTGATGACGCAGAAGAC GAGCGTGACTGGGCCGAGTCCACACTGATGACGCAGAAGAC < 41bp 0.762501646635555 0.522114196983537 0.7211223 0.51668245 prediction 0.480774899304037 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803417 chr13:113803420 synonymous SNV . 0 24 hm5C_associated_SNPs_69074 0 0 3 RPS3 POSTAR2 ENCODE chr13:113803402-113803445
64251 chr19 47858495 47858495 1 + G A STAD 47858492 + 47858472 47858512 41 CCTCCAGCGCCTGTTGCCCACGCGGCCTGACCTCAAGGTCA CCTCCAGCGCCTGTTGCCCACGCAGCCTGACCTCAAGGTCA < 41bp 0.740386372638477 0.488817347608081 0.25143352 0.038235396 prediction 0.480772745276953 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858492 chr19:47858495 nonsynonymous SNV 0.915 4 24 hm5C_associated_SNPs_69076 0 0 1 RBM15 POSTAR2 ENCODE chr19:47858456-47858505
64251 chr7 100803900 100803900 1 + G T rs570283203 100803898 + 100803878 100803918 41 TCCTGGCAGCGTGGCGGGAACGGCTGCTTCTCCTCTGCCCA TCCTGGCAGCGTGGCGGGAACGTCTGCTTCTCCTCTGCCCA < 41bp 0.88994389253083 0.649558354825798 0.6615841 0.20734951 prediction 0.480771075410063 Functional Loss - AP1S1 ENSG00000106367 UTR3 Human protein_coding chr7:100803898 chr7:100803900 . . 0 23 hm5C_associated_SNPs_69077 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:100803888-100803977
64251 chr11 61897468 61897468 1 + G A rs34210125 61897465 + 61897445 61897485 41 CCACGATGCTGACTAAGAAGCCCGAGGATAACCACACCCAG CCACGATGCTGACTAAGAAGCCCAAGGATAACCACACCCAG < 41bp 0.740379737226507 0.491034137259822 0.24979717 0.14353496 prediction 0.480759474453015 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897465 chr11:61897468 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_69079 0 0 1 GRWD1 POSTAR2 ENCODE chr11:61897454-61897468
64251 chr9 129455844 129455844 1 + C T STAD 129455842 + 129455822 129455862 41 CTGAGACGGGCCTCAGTGTGCGCGTGGTCCAGGTCTGGTTT CTGAGACGGGCCTCAGTGTGCGTGTGGTCCAGGTCTGGTTT < 41bp 0.740376967785263 0.467415831433691 0.1674526 0.07493064 prediction 0.480753935570527 Functional Loss - LMX1B ENSG00000136944 CDS Human protein_coding chr9:129455842 chr9:129455844 synonymous SNV . 0 23 hm5C_associated_SNPs_69081 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:129455839-129455863
64251 chr19 37368305 37368305 1 + G T LUAD 37368303 + 37368283 37368323 41 GTTTTGAATCAGCCCTTATTCGGCATCACAGAATTCACACA GTTTTGAATCAGCCCTTATTCGTCATCACAGAATTCACACA < 41bp 0.875070032889818 0.634694048447249 0.61476696 0.17328188 prediction 0.480751968885138 Functional Loss - ZNF345 ENSG00000251247 CDS Human protein_coding chr19:37368303 chr19:37368305 synonymous SNV . 0 23 hm5C_associated_SNPs_69082 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:37368289-37368313
64251 chr16 21172531 21172531 1 + T C UCEC 21172530 + 21172510 21172550 41 AAAGAGGAGCCCCAGAGTATCTCAAGGGACTTGCAGGAACT AAAGAGGAGCCCCAGAGTATCCCAAGGGACTTGCAGGAACT < 41bp 0.791730406195284 0.551365794900549 0.7069814 0.2674355 prediction 0.480729222589469 Functional Loss - TMEM159 ENSG00000011638 CDS Human protein_coding chr16:21172530 chr16:21172531 nonsynonymous SNV 0.368 1 22 hm5C_associated_SNPs_69085 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:21172531-21172532
64251 chrX 106888414 106888414 1 + T C LAML 106888413 + 106888393 106888433 41 GCTCTGTTTTGCAGAGTGACCTCCATTGCAGACAGGCTGAA GCTCTGTTTTGCAGAGTGACCCCCATTGCAGACAGGCTGAA < 41bp 0.78792451519717 0.547581909882008 0.94287956 0.02706796 prediction 0.480685210630325 Functional Loss - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106888413 chrX:106888414 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_69091 0 0 1 SF3B4 POSTAR2 ENCODE chrX:106888354-106888416
64251 chr3 50211375 50211375 1 + G A SKCM 50211372 + 50211352 50211392 41 TGGACCTGCACGACATCAACCGCGAGCCCCTCATTGTAAGG TGGACCTGCACGACATCAACCGCAAGCCCCTCATTGTAAGG < 41bp 0.750976230764632 0.510635851669043 0.20192477 0.068893045 prediction 0.480680758191178 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50211372 chr3:50211375 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_69094 0 0 1 GRWD1 POSTAR2 ENCODE chr3:50211258-50211376
64251 chr20 44569771 44569771 1 + G A CESC 44569768 + 44569748 44569788 41 CAGAGGTGCTGCCCCCGCATCCCGAAGTGGAACTGCTCCGC CAGAGGTGCTGCCCCCGCATCCCAAAGTGGAACTGCTCCGC < 41bp 0.760170512193341 0.519830201743674 0.3469106 0.34262 prediction 0.480680620899333 Functional Loss - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44569768 chr20:44569771 nonsynonymous SNV 0.319 4 24 hm5C_associated_SNPs_69096 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:44569771-44569809
64251 chr3 9781016 9781016 1 + T C STAD 9781015 + 9780995 9781035 41 CTACGGTGTCCCCTATATCCCTGAGGGCCAGTGGCTGTGCC CTACGGTGTCCCCTATATCCCCGAGGGCCAGTGGCTGTGCC < 41bp 0.74965703344958 0.509317323461779 0.3118891 0.82558393 prediction 0.480679419975602 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9781015 chr3:9781016 synonymous SNV . 0 22 hm5C_associated_SNPs_69097 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:9780992-9781017
64251 chr16 85105471 85105471 1 + C T SKCM 85105469 + 85105449 85105489 41 AAAAGGCCGGGAGTGGTTTGCTCGATACGTGAGTGCCCAGG AAAAGGCCGGGAGTGGTTTGCTTGATACGTGAGTGCCCAGG < 41bp 0.83785262263499 0.597513641062068 0.3877809 0.23360327 prediction 0.480677963145844 Functional Loss - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85105469 chr16:85105471 stopgain 0.958 1 23 hm5C_associated_SNPs_69099 0 0 1 DDX24 POSTAR2 ENCODE chr16:85105447-85105490
64251 chr20 32194794 32194794 1 + G T UCEC 32194792 + 32194772 32194812 41 GAAAAGGGTGCCAGCGATGCCTGGATCGCCTGTGGAAGTGA GAAAAGGGTGCCAGCGATGCCTTGATCGCCTGTGGAAGTGA < 41bp 0.740323858299941 0.416018765115204 0.15751597 0.03634721 prediction 0.480647716599882 Functional Loss - CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32194792 chr20:32194794 stopgain 0.998 1 23 hm5C_associated_SNPs_69103 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr20:32194787-32194820
64251 chr6 138202199 138202199 1 + C T SKCM 138202197 + 138202177 138202217 41 GAGCCAGCGCAGAGATGTGCCTCGAACCACACAAAGCACCT GAGCCAGCGCAGAGATGTGCCTTGAACCACACAAAGCACCT < 41bp 0.740320405683309 0.460338895591063 0.9081848 0.23049706 prediction 0.480640811366618 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138202197 chr6:138202199 stopgain 0.756 0 23 hm5C_associated_SNPs_69106 0 0 2 BUD13 POSTAR2 ENCODE chr6:138202153-138202263
64251 chr20 61870735 61870735 1 + G T LUAD 61870733 + 61870713 61870753 41 GGGTCAGTCCAGCCGAGGCCCAGAGGGCGTGGTGGGTTCTT GGGTCAGTCCAGCCGAGGCCCATAGGGCGTGGTGGGTTCTT < 41bp 0.740311717176141 0.385882602363428 0.48070908 0.09072879 prediction 0.480623434352282 Functional Loss - BIRC7 ENSG00000101197 CDS Human protein_coding chr20:61870733 chr20:61870735 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_69108 0 0 1 BUD13 POSTAR2 ENCODE chr20:61870729-61870803
64251 chr12 104476528 104476528 1 + G T UCEC 104476526 + 104476506 104476546 41 CCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCA CCACCCTAGTATCAGATTCTCATGAAGATAAAAAAAATTCA < 41bp 0.740299541296521 0.399052248632132 0.88938016 0.10661602 prediction 0.480599082593042 Functional Loss - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104476526 chr12:104476528 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_69113 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067862 chr12:104476520-104476540
64251 chr6 12164621 12164621 1 + G A UCEC 12164618 + 12164598 12164638 41 TCCCAGGCCCACAGCACTACCGCGGAGGCAGCCCACTGTGC TCCCAGGCCCACAGCACTACCGCAGAGGCAGCCCACTGTGC < 41bp 0.740296585777019 0.498415199489769 0.8874503 0.3955634 prediction 0.480593171554037 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12164618 chr6:12164621 nonsynonymous SNV 0.051 0 24 hm5C_associated_SNPs_69114 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:12164609-12164668
64251 chr11 73105540 73105540 1 + G A COAD 73105537 + 73105517 73105557 41 TGCAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTG TGCAGGCTGCCGCCAGCGCCCCCAAACGTGCCACACATCTG < 41bp 0.740292204446804 0.497233671410932 0.07633528 0.22167566 prediction 0.480584408893608 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73105537 chr11:73105540 synonymous SNV . 0 24 hm5C_associated_SNPs_69118 0 0 1 PPIG POSTAR2 ENCODE chr11:73105520-73105546
64251 chr2 27151141 27151141 1 + G A SKCM 27151138 + 27151118 27151158 41 TCCAGGGTGCTAAGGAGGCACTGGATTTGGGGATCACAGGC TCCAGGGTGCTAAGGAGGCACTGAATTTGGGGATCACAGGC < 41bp 0.756323189775859 0.516032003805797 0.46581203 0.35646352 prediction 0.480582371940124 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27151138 chr2:27151141 nonsynonymous SNV 0.971 2 24 hm5C_associated_SNPs_69119 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27151133-27151162
64251 chr10 75528883 75528883 1 + C T BRCA 75528881 + 75528861 75528901 41 AGTTCAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGCT AGTTCAAGCATGACGATCGGCTTAATGAAGAGAGCGGAGCT < 41bp 0.740289121426349 0.445206937935168 0.11359531 0.16931617 prediction 0.480578242852698 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75528881 chr10:75528883 synonymous SNV . 0 23 hm5C_associated_SNPs_69120 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:75528880-75528907
64251 chr19 4262063 4262063 1 + G A rs112738383 4262060 + 4262040 4262080 41 TCAGAGGATGAGGCTGCTCCCTCGCCCCTGCAGCCAGCCCT TCAGAGGATGAGGCTGCTCCCTCACCCCTGCAGCCAGCCCT < 41bp 0.740282692120849 0.492720333839262 0.17699292 0.13369781 prediction 0.480565384241697 Functional Loss - CCDC94 ENSG00000105248 CDS Human protein_coding chr19:4262060 chr19:4262063 synonymous SNV . 0 24 hm5C_associated_SNPs_69123 0 0 1 ZNF622 POSTAR2 ENCODE chr19:4261981-4262082
64251 chr8 64098995 64098995 1 + G T COAD 64098993 + 64098973 64099013 41 CATGGGGGACAAGTGGATCTCAGGGACAATCAACACAAAGT CATGGGGGACAAGTGGATCTCATGGACAATCAACACAAAGT < 41bp 0.740266108367893 0.409548353678308 0.9068011 0.16540048 prediction 0.480532216735785 Functional Loss - YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64098993 chr8:64098995 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_69126 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:64098924-64098996
64251 chr14 24846079 24846079 1 + A C COAD 24846075 + 24846055 24846095 41 TCCCTATCCAGGGTATCACGCTGGAGGAAGGTGGGTGTGGG TCCCTATCCAGGGTATCACGCTGGCGGAAGGTGGGTGTGGG < 41bp 0.892682253396838 0.652417988373769 0.5550212 0.755404 prediction 0.480528530046138 Functional Loss - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24846075 chr14:24846079 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_69127 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:24846069-24846164
64251 chr5 167850770 167850770 1 + G A SARC 167850767 + 167850747 167850787 41 CAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCCAAG CAGGCTGCATCACCACCATCCACAAGGATGAGGTGGCCAAG < 41bp 0.749170920404814 0.508908946665859 0.4532956 0.21992147 prediction 0.48052394747791 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850767 chr5:167850770 nonsynonymous SNV 0.974 2 24 hm5C_associated_SNPs_69128 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:167850735-167850770
64251 chr19 14038842 14038842 1 + C T rs138991278 14038840 + 14038820 14038860 41 CCTGTGCCGGCAGCTGTGCCCACAGTGAGACCCCCCACCCC CCTGTGCCGGCAGCTGTGCCCATAGTGAGACCCCCCACCCC < 41bp 0.755098235465312 0.514837603034553 0.31382608 0.3504022 prediction 0.480521264861518 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14038840 chr19:14038842 nonsynonymous SNV 0.778 0 23 hm5C_associated_SNPs_69129 0 0 3 DDX24 POSTAR2 ENCODE chr19:14038816-14038843
64251 chr17 80674766 80674766 1 + G T UCEC 80674763 + 80674743 80674783 41 GTGTTCGTGAAAGTGAACCCCAAGGCGGAGGTCAGGCAGCG GTGTTCGTGAAAGTGAACCCCAATGCGGAGGTCAGGCAGCG < 41bp 0.740251177127459 0.392090537097091 0.3737194 0.3208975 prediction 0.480502354254918 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80674763 chr17:80674766 nonsynonymous SNV 0.433 1 24 hm5C_associated_SNPs_69135 0 0 8 BUD13 POSTAR2 ENCODE chr17:80674751-80674772
64251 chrX 102841694 102841694 1 + G T UCEC 102841692 + 102841672 102841712 41 GCCACAAGACGAGAGAAAGCCAGAAGTAACTTGTACTCTGG GCCACAAGACGAGAGAAAGCCATAAGTAACTTGTACTCTGG < 41bp 0.878664168311834 0.638419599626618 0.9022015 0.46847084 prediction 0.480489137370433 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841692 chrX:102841694 stopgain 0.986 0 23 hm5C_associated_SNPs_69137 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:102841598-102841697
64251 chr6 42902285 42902285 1 + C T UCEC 42902283 + 42902263 42902303 41 AAGACCAAGGAGGTGATTGGCACGGGCTATGGCATCCTGGA AAGACCAAGGAGGTGATTGGCATGGGCTATGGCATCCTGGA < 41bp 0.806846869024923 0.566614123772941 0.9162682 0.89637065 prediction 0.480465490503963 Functional Loss - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42902283 chr6:42902285 nonsynonymous SNV 0.775 3 23 hm5C_associated_SNPs_69147 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:42902216-42902290
64251 chr19 41928996 41928996 1 + G T SARC 41928994 + 41928974 41929014 41 AACAGGACCACCCCATCTCCCGGCTGCGGCACTATCTGCTG AACAGGACCACCCCATCTCCCGTCTGCGGCACTATCTGCTG < 41bp 0.740231431441336 0.386217554368845 0.7537118 0.1462203 prediction 0.480462862882673 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41928994 chr19:41928996 synonymous SNV . 0 23 hm5C_associated_SNPs_69148 0 0 1 FMR1 POSTAR2 ENCODE chr19:41928933-41929043
64251 chr16 90001161 90001161 1 + G T COAD 90001159 + 90001139 90001179 41 CAGAGTGGGGCCGGCAACAACTGGGCCAAGGGTCACTACAC CAGAGTGGGGCCGGCAACAACTTGGCCAAGGGTCACTACAC < 41bp 0.89407702637145 0.653848690243483 0.89951503 0.20746848 prediction 0.480456672255934 Functional Loss - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001159 chr16:90001161 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69151 0 0 3 BUD13 POSTAR2 ENCODE chr16:90001107-90001162
64251 chr3 184063543 184063543 1 + G A rs141913527 184063540 + 184063520 184063560 41 AGCCAGCCGGGCTGCCCATTCACGCAGAGCTCTCTGAGCGG AGCCAGCCGGGCTGCCCATTCACACAGAGCTCTCTGAGCGG < 41bp 0.745054710782314 0.504828359611832 0.42982608 0.1956211 prediction 0.480452702340965 Functional Loss - FAM131A ENSG00000175182 UTR3 Human protein_coding chr3:184063540 chr3:184063543 . . 0 24 hm5C_associated_SNPs_69152 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:184063533-184063553
64251 chr20 45362433 45362433 1 + G T SARC 45362430 + 45362410 45362450 41 TGGCCACAGGCAGAACTCCACTGGCATCCCGTACAGCCGCA TGGCCACAGGCAGAACTCCACTGTCATCCCGTACAGCCGCA < 41bp 0.740224247456157 0.346085840465327 0.37337667 0.056012362 prediction 0.480448494912314 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45362430 chr20:45362433 nonsynonymous SNV 0.005 1 24 hm5C_associated_SNPs_69153 0 0 1 SND1 POSTAR2 ENCODE chr20:45362401-45362438
64251 chr6 109761966 109761966 1 + G T rs181183799 109761963 + 109761943 109761983 41 GTTGCTGGGCCGCCGGCGCGCGGGCGGCCGCGACCGCCGGG GTTGCTGGGCCGCCGGCGCGCGGTCGGCCGCGACCGCCGGG < 41bp 0.917871228466533 0.677652740939387 0.9163913 0.6283462 prediction 0.480436975054292 Functional Loss - PPIL6;SMPD2 ENSG00000135587;ENSG00000185250 UTR5 Human other chr6:109761963 chr6:109761966 . . 0 24 hm5C_associated_SNPs_69157 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr6:109761931-109761987
64251 chr3 197746225 197746225 1 + A T HNSC 197746221 + 197746201 197746241 41 CAGTTGCCGTGTGTAATTTGCAGAAGTTCCCTAAGCCTTTA CAGTTGCCGTGTGTAATTTGCAGATGTTCCCTAAGCCTTTA < 41bp 0.740218120302047 0.424157004136853 0.59190285 0.57048887 prediction 0.480436240604094 Functional Loss - LMLN ENSG00000185621 CDS Human protein_coding chr3:197746221 chr3:197746225 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_69158 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:197746224-197746247
64251 chr9 108456972 108456972 1 + G A SARC 108456969 + 108456949 108456989 41 CTCCATGGGACGAGTTGGCTCTGGCCTTCTCCCGCACGTCC CTCCATGGGACGAGTTGGCTCTGACCTTCTCCCGCACGTCC < 41bp 0.758056683661494 0.517842031768338 0.32233566 0.07230964 prediction 0.480429303786311 Functional Loss - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108456969 chr9:108456972 nonsynonymous SNV 0.586 0 24 hm5C_associated_SNPs_69162 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:108456936-108456973
64251 chr17 21215473 21215473 1 + G C HNSC 21215469 + 21215449 21215489 41 TGCAGATTGAGATGGCCATCCTGCGGTTCCCTTACGAGTCC TGCAGATTGAGATGGCCATCCTGCCGTTCCCTTACGAGTCC < 41bp 0.842373637740109 0.602162689878561 0.36669683 0.15584359 prediction 0.480421895723097 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21215469 chr17:21215473 nonsynonymous SNV 0.845 4 25 hm5C_associated_SNPs_69165 0 0 1 DGCR8 POSTAR2 ENCODE chr17:21215453-21215498
64251 chr1 181018307 181018307 1 + C T SKCM 181018305 + 181018285 181018325 41 CACCACATATGACAGTGTCACTCGGCAGAAGGAGCCACGGG CACCACATATGACAGTGTCACTTGGCAGAAGGAGCCACGGG < 41bp 0.802425967414639 0.562227535507229 0.08822876 0.19972861 prediction 0.48039686381482 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018305 chr1:181018307 nonsynonymous SNV 0.095 3 23 hm5C_associated_SNPs_69171 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr17 17991294 17991294 1 + G T rs142012845 17991291 + 17991271 17991311 41 CCGCCGTCAGACCGGAATTGCCGGTGCCGCCGCCACCGCTG CCGCCGTCAGACCGGAATTGCCGTTGCCGCCGCCACCGCTG < 41bp 0.740198431536859 0.41276707916414 0.90828407 0.5822091 prediction 0.480396863073717 Functional Loss - DRG2 ENSG00000108591 UTR5 Human protein_coding chr17:17991291 chr17:17991294 . . 0 24 hm5C_associated_SNPs_69172 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:17991278-17991323
64251 chr4 1348626 1348626 1 + G A COAD 1348623 + 1348603 1348643 41 AAGTTCCTGCCGGCTGTGTGCTCGTGGATCCAGGTGAGCCT AAGTTCCTGCCGGCTGTGTGCTCATGGATCCAGGTGAGCCT < 41bp 0.740191614804556 0.498981685378896 0.1761032 0.11090267 prediction 0.480383229609112 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1348623 chr4:1348626 synonymous SNV . 0 24 hm5C_associated_SNPs_69175 0 0 3 GRWD1 POSTAR2 ENCODE chr4:1348595-1348636
64251 chr16 30440430 30440430 1 - G A COAD 30440432 - 30440412 30440452 41 CTGGGAACAGTTCCATCAGCCTCGGAATCTCCTCCTGGCCT CTGGGAACAGTTCCATCAGCCTTGGAATCTCCTCCTGGCCT < 41bp 0.817075344228861 0.576893252047954 0.34059486 0.21590155 prediction 0.480364184361815 Functional Loss - DCTPP1 ENSG00000179958 CDS Human protein_coding chr16:30440432 chr16:30440430 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_69178 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr16:30440384-30440437
64251 chr14 55535064 55535064 1 + G C rs141621682 55535060 + 55535040 55535080 41 TCACAAATAATTAGTGCTACCTGGGGTACTCTCAAATATAC TCACAAATAATTAGTGCTACCTGGCGTACTCTCAAATATAC < 41bp 0.740164517825629 0.497626824905983 0.054616243 0.023999989 prediction 0.480329035651258 Functional Loss - MAPK1IP1L ENSG00000168175 UTR3 Human protein_coding chr14:55535060 chr14:55535064 . . 0 25 hm5C_associated_SNPs_69186 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:55535043-55535077
64251 chr2 27665507 27665507 1 + C T BLCA 27665505 + 27665485 27665525 41 TCGCGCTGATCTTGGTGGGCCACGTGAACCTGCTGCTGGGG TCGCGCTGATCTTGGTGGGCCATGTGAACCTGCTGCTGGGG < 41bp 0.740160699723903 0.49263131939542 0.3470656 0.3443172 prediction 0.480321399447807 Functional Loss - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27665505 chr2:27665507 synonymous SNV . 0 23 hm5C_associated_SNPs_69189 0 0 2 CSTF2 POSTAR2 ENCODE chr2:27665436-27665524
64251 chr18 77170980 77170980 1 + G T LUSC 77170978 + 77170958 77170998 41 GCACACTGCTGGGTTCCCCGCGGCACTCCCCCTCCACCTCG GCACACTGCTGGGTTCCCCGCGTCACTCCCCCTCCACCTCG < 41bp 0.88890925686932 0.648751952986449 0.850822 0.33444375 prediction 0.480314607765741 Functional Loss - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77170978 chr18:77170980 synonymous SNV . 0 23 hm5C_associated_SNPs_69192 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:77170934-77170981
64251 chr6 36075326 36075326 1 + C T rs28763973 36075324 + 36075304 36075344 41 ATGCCTACTTTGCTCAGTACCACGATCCTGATGATGAACCA ATGCCTACTTTGCTCAGTACCATGATCCTGATGATGAACCA < 41bp 0.847556990048199 0.607407981584453 0.19346377 0.2025441 prediction 0.480298016927492 Functional Loss - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:36075324 chr6:36075326 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_69195 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:36075313-36075343
64251 chr11 66258740 66258740 1 + T C LIHC 66258739 + 66258719 66258759 41 CCCAGAGCCTTCCCTGGACTCTGAGGTGACTTCCAAGCTGA CCCAGAGCCTTCCCTGGACTCCGAGGTGACTTCCAAGCTGA < 41bp 0.745858140230113 0.505717239606308 0.8467516 0.91294557 prediction 0.48028180124761 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66258739 chr11:66258740 synonymous SNV . 0 22 hm5C_associated_SNPs_69198 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:66258725-66258754
64251 chr7 6624762 6624762 1 + G A STAD 6624759 + 6624739 6624779 41 TACGTCTTGACCTTGACGGCCTCGGCTGCCACCGTCGCCAT TACGTCTTGACCTTGACGGCCTCAGCTGCCACCGTCGCCAT < 41bp 0.743534433868432 0.50340992962709 0.15689486 0.10555178 prediction 0.480249008482683 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6624759 chr7:6624762 synonymous SNV . 0 24 hm5C_associated_SNPs_69205 0 0 3 GRWD1 POSTAR2 ENCODE chr7:6624684-6624829
64251 chr6 4892081 4892081 1 + C T rs61749071 4892079 + 4892059 4892099 41 TGAACTGTGAGGAATACATCCACGACTTCAACAGACGCCAC TGAACTGTGAGGAATACATCCATGACTTCAACAGACGCCAC < 41bp 0.820323003806966 0.580201044545953 0.038627356 0.08090305 prediction 0.480243918522027 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892079 chr6:4892081 synonymous SNV . 0 23 hm5C_associated_SNPs_69206 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:4892074-4892095
64251 chr16 30771702 30771702 1 + G T UCEC 30771700 + 30771680 30771720 41 GGCAGAAAATGAGCGCGTGGCAGAAGAGGTCCAGGGTGATG GGCAGAAAATGAGCGCGTGGCATAAGAGGTCCAGGGTGATG < 41bp 0.849140655377173 0.609024331983888 0.71330404 0.490033 prediction 0.480232646786571 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30771700 chr16:30771702 nonsynonymous SNV 0.969 1 23 hm5C_associated_SNPs_69211 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30771681-30771730
64251 chr19 2810300 2810300 1 + A T LIHC 2810296 + 2810276 2810316 41 TCTGAGGCTCTGCCCCATCCCTGCAGGCGGAGTTCGCCATG TCTGAGGCTCTGCCCCATCCCTGCTGGCGGAGTTCGCCATG < 41bp 0.857310440875554 0.617204484858296 0.38698334 0.11403081 prediction 0.480211912034516 Functional Loss - THOP1 ENSG00000172009 splicing Human protein_coding chr19:2810296 chr19:2810300 . 0.696 0 25 hm5C_associated_SNPs_69214 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:2810262-2810300
64251 chr11 61897938 61897938 1 + G A BLCA 61897935 + 61897915 61897955 41 AGCCCGATCGCCCCGTCTTCCCCGAGTCCCCAAGTCTTAGC AGCCCGATCGCCCCGTCTTCCCCAAGTCCCCAAGTCTTAGC < 41bp 0.755641921537854 0.51554494407968 0.28547895 0.06078598 prediction 0.480193954916349 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897935 chr11:61897938 synonymous SNV . 0 24 hm5C_associated_SNPs_69220 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61897908-61897948
64251 chr15 75094676 75094676 1 + T C STAD 75094675 + 75094655 75094695 41 CCTCCCCCTGGCCACAGCCCCTGAAGGACGTCGTCCCTCGG CCTCCCCCTGGCCACAGCCCCCGAAGGACGTCGTCCCTCGG < 41bp 0.745396377358398 0.505301641286014 0.4813802 0.42269072 prediction 0.480189472144769 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75094675 chr15:75094676 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_69221 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:75094676-75094677
64251 chr11 63970972 63970972 1 + C T UCEC 63970970 + 63970950 63970990 41 TGATGGCGCAGTACAACCGGCACGACAGCCCCGAAGATGTG TGATGGCGCAGTACAACCGGCATGACAGCCCCGAAGATGTG < 41bp 0.740093219172768 0.460542336373295 0.24922177 0.31550938 prediction 0.480186438345537 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63970970 chr11:63970972 stopgain . 0 23 hm5C_associated_SNPs_69222 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:63970951-63970987
64251 chr17 61765906 61765906 1 + C T UCEC 61765904 + 61765884 61765924 41 CAGCCCATCCTTCCGGAAATCACGAATGTCCCGTGCCCAGA CAGCCCATCCTTCCGGAAATCATGAATGTCCCGTGCCCAGA < 41bp 0.843353653152039 0.603261158242816 0.3974798 0.28432694 prediction 0.480184989818446 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61765904 chr17:61765906 stopgain 0.975 1 23 hm5C_associated_SNPs_69223 0 0 2 PPIG POSTAR2 ENCODE chr17:61765901-61765951
64251 chr13 108881888 108881888 1 + G T LUAD 108881886 + 108881866 108881906 41 TCTTATTTTGATACGATACACTGGAGACAATTCACCCTATT TCTTATTTTGATACGATACACTTGAGACAATTCACCCTATT < 41bp 0.850288729901842 0.610197835920519 0.21648517 0.10159704 prediction 0.480181787962644 Functional Loss - ABHD13 ENSG00000139826 CDS Human protein_coding chr13:108881886 chr13:108881888 stopgain 1.000 1 23 hm5C_associated_SNPs_69224 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr13:108881853-108881888
64251 chr19 46025752 46025752 1 + G A rs200872555 46025749 + 46025729 46025769 41 CCACCCCCTGCACCCCCTCTCCCGGCAGCACAGGGCCCTGG CCACCCCCTGCACCCCCTCTCCCAGCAGCACAGGGCCCTGG < 41bp 0.76087577238595 0.520795417123621 0.87337947 0.5882933 prediction 0.480160710524657 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46025749 chr19:46025752 synonymous SNV . 0 24 hm5C_associated_SNPs_69226 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:46025745-46025811
64251 chr20 61919751 61919751 1 + G A rs560044808 61919748 + 61919728 61919768 41 CACGCTGCCATCCGACCACCCTCGGCTCCCGAGTCCACGCC CACGCTGCCATCCGACCACCCTCAGCTCCCGAGTCCACGCC < 41bp 0.769115821581686 0.529037922887037 0.2739206 0.14510885 prediction 0.480155797389297 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919748 chr20:61919751 unknown . 0 24 hm5C_associated_SNPs_69228 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61919725-61919847
64251 chr12 50152237 50152237 1 + G T COAD 50152235 + 50152215 50152255 41 ACCCTCAGTGCACTCTATGCCAGGCGCCGTAGCTACCTCTT ACCCTCAGTGCACTCTATGCCATGCGCCGTAGCTACCTCTT < 41bp 0.740076666753763 0.380560720268206 0.90212417 0.07589361 prediction 0.480153333507527 Functional Loss - TMBIM6 ENSG00000139644 CDS Human protein_coding chr12:50152235 chr12:50152237 nonsynonymous SNV 0.975 3 23 hm5C_associated_SNPs_69230 0 0 22 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:50152166-50152243
64251 chr19 45912598 45912598 1 + G A LUSC 45912595 + 45912575 45912615 41 AGCCTGAAGCCAGGGCAACTCCGGGATCCACCAAGAAGAGG AGCCTGAAGCCAGGGCAACTCCGAGATCCACCAAGAAGAGG < 41bp 0.764328913777421 0.524252689582943 0.8834698 0.11183709 prediction 0.480152448388955 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45912595 chr19:45912598 nonsynonymous SNV 0.014 1 24 hm5C_associated_SNPs_69231 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45912561-45912605
64251 chr10 72489879 72489879 1 + G A rs144469426 72489876 + 72489856 72489896 41 AGTCCCTGAGCCTGATCGAGCGCGGGAACCCCTCACGCAGC AGTCCCTGAGCCTGATCGAGCGCAGGAACCCCTCACGCAGC < 41bp 0.769437557867887 0.529366615033073 0.9100081 0.6579988 prediction 0.480141885669628 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72489876 chr10:72489879 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_69233 0 0 1 DDX24 POSTAR2 ENCODE chr10:72489858-72489894
64251 chr4 119552218 119552218 1 + G A CESC 119552215 + 119552195 119552235 41 TCTACATCCAGCTCATGCCTCACGGTGACCTCTCCAGGCAC TCTACATCCAGCTCATGCCTCACAGTGACCTCTCCAGGCAC < 41bp 0.755196715423844 0.515127287362427 0.34589162 0.047983915 prediction 0.480138856122835 Functional Loss - LOC729218 ENSG00000260404 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:119552215 chr4:119552218 . . 0 24 hm5C_associated_SNPs_69234 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr4:119552180-119552220
64251 chr6 18217997 18217997 1 + C T HNSC 18217995 + 18217975 18218015 41 TCCCACAAAGTATTTTGTCACTCGGTGGAGCACAGACCCAT TCCCACAAAGTATTTTGTCACTTGGTGGAGCACAGACCCAT < 41bp 0.740065878869237 0.447717536729244 0.2823534 0.3585772 prediction 0.480131757738474 Functional Loss - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18217995 chr6:18217997 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_69236 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:18217980-18218012
64251 chr1 166819052 166819052 1 + A C LUSC 166819051 + 166819031 166819071 41 GGCTGATGGGAGGAAGTTACCACCGTACATCATTTTGAGGG GGCTGATGGGAGGAAGTTACCCCCGTACATCATTTTGAGGG < 41bp 0.740064254708419 0.480166032813224 0.2864129 0.17320743 prediction 0.480128509416837 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166819051 chr1:166819052 synonymous SNV . 0 22 hm5C_associated_SNPs_69238 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:166819024-166819058
64251 chr20 54974411 54974411 1 + C T GBM 54974409 + 54974389 54974429 41 GGACGAACACTGGTCAGATACACGGGTATGTGAGACGTTGA GGACGAACACTGGTCAGATACATGGGTATGTGAGACGTTGA < 41bp 0.797638710275386 0.557579910447747 0.31833622 0.36874378 prediction 0.480117599655278 Functional Loss - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54974409 chr20:54974411 nonsynonymous SNV 0.819 5 23 hm5C_associated_SNPs_69243 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:54974362-54974412
64251 chr17 45286881 45286881 1 + T C UCEC 45286880 + 45286860 45286900 41 ACCAGCCCCTGCCCCAGCTCCTGAGGCTCCCAAGGAACCTG ACCAGCCCCTGCCCCAGCTCCCGAGGCTCCCAAGGAACCTG < 41bp 0.753512157420418 0.513453929062954 0.61891353 0.9002347 prediction 0.480116456714929 Functional Loss - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45286880 chr17:45286881 synonymous SNV . 0 22 hm5C_associated_SNPs_69244 0 0 1 DDX55 POSTAR2 ENCODE chr17:45286777-45286885
64251 chr17 46990326 46990326 1 + C T UCEC 46990324 + 46990304 46990344 41 CTGATGACAACGGGCAATAACACAGTGAGGTTTAACCCCAA CTGATGACAACGGGCAATAACATAGTGAGGTTTAACCCCAA < 41bp 0.740057931930443 0.459687716106624 0.71478987 0.82409966 prediction 0.480115863860886 Functional Loss - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:46990324 chr17:46990326 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_69245 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:46990300-46990336
64251 chr6 109764076 109764076 1 + C T LGG 109764074 + 109764054 109764094 41 TCATGATGCCTATCTTGAAACTCGGGACTTCAAGGTGAGGA TCATGATGCCTATCTTGAAACTTGGGACTTCAAGGTGAGGA < 41bp 0.740054979420951 0.466025077494547 0.05967176 0.04118976 prediction 0.480109958841902 Functional Loss - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764074 chr6:109764076 nonsynonymous SNV 0.058 2 23 hm5C_associated_SNPs_69248 0 0 1 PRPF8 POSTAR2 ENCODE chr6:109764076-109764122
64251 chr18 13103524 13103524 1 + C T LGG 13103522 + 13103502 13103542 41 TTTTAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACA TTTTAGAGAGCTGTCTAGAACTTGAGAATCATGGCACCACA < 41bp 0.740040261551162 0.462909624601977 0.23774049 0.08761108 prediction 0.480080523102324 Functional Loss - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13103522 chr18:13103524 synonymous SNV . 0 23 hm5C_associated_SNPs_69252 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:13103491-13103541
64251 chr2 203630413 203630413 1 + C T LUAD 203630411 + 203630391 203630431 41 CACAGAGCAAGACCGAGTCTCTCGAGGAACAAGTACAGTCA CACAGAGCAAGACCGAGTCTCTTGAGGAACAAGTACAGTCA < 41bp 0.83135639400233 0.591339442453807 0.80769646 0.3254196 prediction 0.480033903097046 Functional Loss - FAM117B ENSG00000138439 CDS Human protein_coding chr2:203630411 chr2:203630413 stopgain 0.999 1 23 hm5C_associated_SNPs_69265 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:203630413-203630447
64251 chr13 28197244 28197244 1 + C T CESC 28197242 + 28197222 28197262 41 AATTAATTTACGCATTCAGACTCGAGGTACCCTTCCAGCTG AATTAATTTACGCATTCAGACTTGAGGTACCCTTCCAGCTG < 41bp 0.819728317963791 0.579711585626162 0.07808286 0.17035836 prediction 0.480033464675259 Functional Loss - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197242 chr13:28197244 stopgain 0.997 0 23 hm5C_associated_SNPs_69266 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr13:28197180-28197320
64251 chr1 1421514 1421514 1 + G A UCEC 1421511 + 1421491 1421531 41 CCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACC CCAGCCTGGAAGCACGGGTGCGCAACATCGCCATAGCAACC < 41bp 0.757824899587564 0.517814961968145 0.6491612 0.22067037 prediction 0.480019875238839 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421511 chr1:1421514 nonsynonymous SNV 0.001 4 24 hm5C_associated_SNPs_69268 0 0 7 DDX24 POSTAR2 ENCODE chr1:1421497-1421566
64251 chr18 44037456 44037456 1 + A C rs376656864 44037455 + 44037435 44037475 41 TGAGGAAGGCAGCAGAGCTCCAGCAGGTGAAGGGAGAGTTC TGAGGAAGGCAGCAGAGCTCCCGCAGGTGAAGGGAGAGTTC < 41bp 0.759814121685051 0.519804797567901 0.8769155 0.3775645 prediction 0.480018648234299 Functional Loss - RNF165 ENSG00000141622 UTR3 Human protein_coding chr18:44037455 chr18:44037456 . . 0 22 hm5C_associated_SNPs_69269 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:44037423-44037457
64251 chr17 37358661 37358661 1 + G A UCEC 37358658 + 37358638 37358678 41 GCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAG GCTCGATGCCGGAAAAACACCTTAGCCCGCCGGAAGGGCAG < 41bp 0.742084219085517 0.502076024057191 0.12089035 0.047562808 prediction 0.480016390056651 Functional Loss - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37358658 chr17:37358661 synonymous SNV . 0 24 hm5C_associated_SNPs_69270 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:37358652-37358688
64251 chr19 11144114 11144114 1 + G T LUAD 11144112 + 11144092 11144132 41 GACCAGAAGGTGATCCAGGCCGGCATGTTCGACCAGAAGTC GACCAGAAGGTGATCCAGGCCGTCATGTTCGACCAGAAGTC < 41bp 0.739975300708034 0.423204270117898 0.78984666 0.45631912 prediction 0.479950601416068 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144112 chr19:11144114 nonsynonymous SNV 0.982 4 23 hm5C_associated_SNPs_69278 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:11144041-11144134
64251 chr17 1680560 1680560 1 + G T UCEC 1680557 + 1680537 1680577 41 AAGCTGACTCAGGTGGAACACCGGGCTGGCTTTGAGTGGAA AAGCTGACTCAGGTGGAACACCGTGCTGGCTTTGAGTGGAA < 41bp 0.739974301708199 0.343679090356897 0.86978495 0.45527804 prediction 0.479948603416399 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1680557 chr17:1680560 synonymous SNV . 0 24 hm5C_associated_SNPs_69280 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:1680552-1680582
64251 chr2 118579562 118579562 1 + T C READ 118579561 + 118579541 118579581 41 AATGGGTGGCAGTAACAGATCTGCTGAAGCACAGAAACTTG AATGGGTGGCAGTAACAGATCCGCTGAAGCACAGAAACTTG < 41bp 0.739972024983723 0.499454841690446 0.09791112 0.13514611 prediction 0.479944049967446 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118579561 chr2:118579562 synonymous SNV . 0 22 hm5C_associated_SNPs_69282 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118579554-118579619
64251 chr9 35609184 35609184 1 + C T COAD 35609182 + 35609162 35609202 41 GCCGCTCACTACCCTCATCCCCCGAGCTCCCCCGCCGTATG GCCGCTCACTACCCTCATCCCCTGAGCTCCCCCGCCGTATG < 41bp 0.739968710611827 0.48185514258003 0.26018524 0.22066328 prediction 0.479937421223654 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35609182 chr9:35609184 synonymous SNV . 0 23 hm5C_associated_SNPs_69283 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr9:35609165-35609185
64251 chr20 13797171 13797171 1 + G A COAD 13797168 + 13797148 13797188 41 TGCTGCATCGAGACACAATGCTGGCAGCTGCGGCAGTGTAC TGCTGCATCGAGACACAATGCTGACAGCTGCGGCAGTGTAC < 41bp 0.747176723362429 0.507210945001227 0.40479335 0.33336723 prediction 0.479931556722405 Functional Loss - NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13797168 chr20:13797171 nonsynonymous SNV 0.870 5 24 hm5C_associated_SNPs_69284 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr20:13797140-13797190
64251 chr5 36177320 36177320 1 + G T UCEC 36177318 + 36177298 36177338 41 TGCTAAAGAATGACTGCTTTCAGGAATTTTTCCAGCTCAAC TGCTAAAGAATGACTGCTTTCATGAATTTTTCCAGCTCAAC < 41bp 0.890469099015341 0.65050788121025 0.91079897 0.39648527 prediction 0.479922435610181 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36177318 chr5:36177320 nonsynonymous SNV 0.971 0 23 hm5C_associated_SNPs_69285 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:36177303-36177338
64251 chr6 119229073 119229073 1 + G T rs7765016 119229071 + 119229051 119229091 41 TGAAAGCACTTATAAAGAAACAGGAATCATTAGACCAGGTT TGAAAGCACTTATAAAGAAACATGAATCATTAGACCAGGTT < 41bp 0.853290574549901 0.613335198866676 0.8829046 0.43871918 prediction 0.479910751366451 Functional Loss - ASF1A ENSG00000111875 UTR3 Human protein_coding chr6:119229071 chr6:119229073 . . 0 23 hm5C_associated_SNPs_69288 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr6:119229053-119229074
64251 chr1 168282080 168282080 1 + C T SKCM 168282078 + 168282058 168282098 41 ACTTCACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTC ACTTCACCCCCTTCTGTGCTCTTCACCCAAGCACCCACTTC < 41bp 0.813998152722959 0.574043177393181 0.90913033 0.04743913 prediction 0.479909950659557 Functional Loss - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168282078 chr1:168282080 nonsynonymous SNV 0.019 2 23 hm5C_associated_SNPs_69289 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:168282057-168282088
64251 chr9 119460734 119460734 1 + G A UCEC 119460731 + 119460711 119460751 41 TGCAGAGGTGCAGGCTGTGTCTCGCTGTGACTACTTCCTGG TGCAGAGGTGCAGGCTGTGTCTCACTGTGACTACTTCCTGG < 41bp 0.739923930144654 0.493856403648149 0.2567684 0.1091741 prediction 0.479847860289307 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460731 chr9:119460734 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_69299 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr9:119460727-119460750
64251 chr6 3129391 3129391 1 + C T UCEC 3129389 + 3129369 3129409 41 CACAAGATGGTGATCTGGGGCGCCAACGCCTACGTCACTGA CACAAGATGGTGATCTGGGGCGTCAACGCCTACGTCACTGA < 41bp 0.739923805830284 0.456278223640259 0.38652605 0.24501482 prediction 0.479847611660569 Functional Loss - BPHL ENSG00000137274 CDS Human protein_coding chr6:3129389 chr6:3129391 nonsynonymous SNV 0.252 1 23 hm5C_associated_SNPs_69300 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:3129371-3129402
64251 chr16 53468553 53468553 1 + G C rs577332958 53468549 + 53468529 53468569 41 TCGGATGAGGAGGAGGAGGACGACGGCGAGGCGGAAGACGC TCGGATGAGGAGGAGGAGGACGACCGCGAGGCGGAAGACGC < 41bp 0.811078442214749 0.571158396529403 0.80043674 0.56041014 prediction 0.479840091370692 Functional Loss - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53468549 chr16:53468553 nonsynonymous SNV 0.828 1 25 hm5C_associated_SNPs_69301 0 0 1 FXR2 POSTAR2 ENCODE chr16:53468530-53468608
64251 chr4 113558337 113558337 1 + G C rs28364856 113558336 + 113558316 113558356 41 TAACCGAGACTATCAGGATCCGGAGACGGAAATGTCCGAAG TAACCGAGACTATCAGGATCCCGAGACGGAAATGTCCGAAG < 41bp 0.813402600268745 0.57348639919893 0.72838104 0.023080975 prediction 0.479832402139629 Functional Loss - LARP7 ENSG00000174720 UTR5 Human protein_coding chr4:113558336 chr4:113558337 . . 0 22 hm5C_associated_SNPs_69302 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:113558331-113558356
64251 chr6 36179174 36179174 1 + G A UCEC 36179171 + 36179151 36179191 41 CGTCGTGTCCGCCTGCTACGCCGGGAGATCAATGCCCTTCG CGTCGTGTCCGCCTGCTACGCCGAGAGATCAATGCCCTTCG < 41bp 0.759744958512989 0.519850931709286 0.88129514 0.53380305 prediction 0.479788053607408 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36179171 chr6:36179174 synonymous SNV . 0 24 hm5C_associated_SNPs_69305 0 0 2 BUD13 POSTAR2 ENCODE chr6:36179164-36179201
64251 chr2 23916248 23916248 1 + C T UCEC 23916246 + 23916226 23916266 41 CCTTCGCGCTGCAGATCTTCCCCGAGGTGGCCGCCCAGGAG CCTTCGCGCTGCAGATCTTCCCTGAGGTGGCCGCCCAGGAG < 41bp 0.7398890487639 0.463488925488849 0.35562223 0.21032065 prediction 0.479778097527801 Functional Loss - KLHL29 ENSG00000119771 CDS Human protein_coding chr2:23916246 chr2:23916248 synonymous SNV . 0 23 hm5C_associated_SNPs_69308 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:23916228-23916249
64251 chr16 777344 777344 1 + G C rs147676844 777343 + 777323 777363 41 GTGGAATTCCACGCGAGTGCCGGGGAGTTCCTGGGGAGCCG GTGGAATTCCACGCGAGTGCCCGGGAGTTCCTGGGGAGCCG < 41bp 0.739883642246688 0.446604714837277 0.9095344 0.58647364 prediction 0.479767284493376 Functional Loss - HAGHL ENSG00000103253 UTR5 Human protein_coding chr16:777343 chr16:777344 . . 0 22 hm5C_associated_SNPs_69311 0 0 10 BUD13 POSTAR2 ENCODE chr16:777209-777369
64251 chr2 27278691 27278691 1 + C T UCEC 27278689 + 27278669 27278709 41 ACTCCCAGAGTTCCTCTGAGCACCAGCCCAGTTCCTGTCTC ACTCCCAGAGTTCCTCTGAGCATCAGCCCAGTTCCTGTCTC < 41bp 0.822549732836024 0.582686532482447 0.1607402 0.13921383 prediction 0.479726400707154 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278689 chr2:27278691 synonymous SNV . 0 23 hm5C_associated_SNPs_69319 0 0 1 YBX3 POSTAR2 ENCODE chr2:27278607-27278712
64251 chr19 35504576 35504576 1 + G T LUSC 35504574 + 35504554 35504594 41 ACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGG ACGCCCAACCTTTCCCGAGCCATCAGCGACGCAGACCATGG < 41bp 0.739857214934364 0.388687297161964 0.41762412 0.09068933 prediction 0.479714429868728 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504574 chr19:35504576 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_69320 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chr9 116045694 116045694 1 + C T COAD 116045692 + 116045672 116045712 41 AATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTC AATGAAACGCTTGGAAGAGGCCTGACTCCATAAGGAGATTC < 41bp 0.739845084202783 0.454679196791193 0.23142445 0.20755225 prediction 0.479690168405566 Functional Loss - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116045692 chr9:116045694 stopgain 0.991 1 23 hm5C_associated_SNPs_69324 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:116045686-116045712
64251 chr6 33244991 33244991 1 + G C rs555363804 33244987 + 33244967 33245007 41 GCTTGCTGGCGGCGAGGCCGCGGCGACAAGGTAGCCACCCC GCTTGCTGGCGGCGAGGCCGCGGCCACAAGGTAGCCACCCC < 41bp 0.816769056946931 0.576927997932873 0.81702614 0.4687247 prediction 0.479682118028117 Functional Loss - B3GALT4 ENSG00000235863 UTR5 Human protein_coding chr6:33244987 chr6:33244991 . . 0 25 hm5C_associated_SNPs_69327 0 0 1 FKBP4 POSTAR2 ENCODE chr6:33244954-33245083
64251 chr20 25228991 25228991 1 + G A SKCM 25228988 + 25228968 25229008 41 TACTTCTTCGCGCTGGCGCACACGGTGCGCGACCACCTCGT TACTTCTTCGCGCTGGCGCACACAGTGCGCGACCACCTCGT < 41bp 0.748530949697076 0.508693752237118 0.16005939 0.09082559 prediction 0.479674394919917 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25228988 chr20:25228991 synonymous SNV . 0 24 hm5C_associated_SNPs_69331 0 0 1 DDX3X POSTAR2 ENCODE chr20:25228985-25229031
64251 chr1 166818940 166818940 1 + G A SKCM 166818937 + 166818917 166818957 41 CATTTGTTTAGAGGTGCCATCACGGGTAACTGTTGATAACC CATTTGTTTAGAGGTGCCATCACAGGTAACTGTTGATAACC < 41bp 0.757442796302718 0.517606757603118 0.90476733 0.8767996 prediction 0.479672077399199 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818937 chr1:166818940 nonsynonymous SNV 0.697 2 24 hm5C_associated_SNPs_69333 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166818920-166818940
64251 chr7 148921630 148921630 1 + G T COAD 148921628 + 148921608 148921648 41 CCCTACACGTGCGGCGAGTGCGGCAAGAGCTTCCGCTACAA CCCTACACGTGCGGCGAGTGCGTCAAGAGCTTCCGCTACAA < 41bp 0.88865045202281 0.648826646491448 0.7925912 0.29192108 prediction 0.479647611062724 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921628 chr7:148921630 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_69340 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:148921620-148921640
64251 chr12 72070691 72070691 1 + C T UCEC 72070689 + 72070669 72070709 41 ACAAAAGGAACGCAGAGCAACTCGAAGATGGATCAAAGCCA ACAAAAGGAACGCAGAGCAACTTGAAGATGGATCAAAGCCA < 41bp 0.739822487828576 0.459693310864598 0.21600541 0.03726417 prediction 0.479644975657152 Functional Loss - THAP2 ENSG00000173451 CDS Human protein_coding chr12:72070689 chr12:72070691 stopgain 0.995 0 23 hm5C_associated_SNPs_69341 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:72070672-72070702
64251 chr10 15145638 15145638 1 + G A STAD 15145635 + 15145615 15145655 41 TGTCAGGGTGGACGCCTGCACACGTCAGGAAGCAGCTTGCC TGTCAGGGTGGACGCCTGCACACATCAGGAAGCAGCTTGCC < 41bp 0.765682110391703 0.525870079418778 0.14159676 0.0576306 prediction 0.479624061945851 Functional Loss - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145635 chr10:15145638 nonsynonymous SNV 0.269 0 24 hm5C_associated_SNPs_69345 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:15145607-15145638
64251 chr18 76754200 76754200 1 + G A PRAD 76754197 + 76754177 76754217 41 ACCGTGCAAAGCCGCCCCTGCGCGTGCAGCACTCCTGCCCC ACCGTGCAAAGCCGCCCCTGCGCATGCAGCACTCCTGCCCC < 41bp 0.739799115835538 0.488698138251917 0.390641 0.2694018 prediction 0.479598231671075 Functional Loss - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76754197 chr18:76754200 nonsynonymous SNV 0.955 3 24 hm5C_associated_SNPs_69351 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:76754196-76754232
64251 chr12 22778393 22778393 1 + G T SARC 22778391 + 22778371 22778411 41 AATTACATCCACGTCCCTCCCGGCTCCCCGGAGGTGCCCAA AATTACATCCACGTCCCTCCCGTCTCCCCGGAGGTGCCCAA < 41bp 0.739792960286991 0.390699562983768 0.22545072 0.07024175 prediction 0.479585920573983 Functional Loss - ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22778391 chr12:22778393 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69353 0 0 5 GEMIN5 POSTAR2 ENCODE chr12:22778250-22778430
64251 chr3 183884242 183884242 1 + G T BLCA 183884239 + 183884219 183884259 41 CTGGTCCTTTCCCAGGTAAACGAGATCAACTTTGAGAACAT CTGGTCCTTTCCCAGGTAAACGATATCAACTTTGAGAACAT < 41bp 0.739786375679307 0.34245913179586 0.2830127 0.046103626 prediction 0.479572751358615 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183884239 chr3:183884242 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_69356 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:183884235-183884256
64251 chr2 33477873 33477873 1 + G T LUAD 33477871 + 33477851 33477891 41 TGTTGTAGTGTGGGCAAGGCCTGGGGCCCACACTGTGAGAA TGTTGTAGTGTGGGCAAGGCCTTGGGCCCACACTGTGAGAA < 41bp 0.881597804987549 0.64181517059172 0.21101445 0.04186514 prediction 0.479565268791658 Functional Loss - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33477871 chr2:33477873 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69358 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:33477852-33477890
64251 chr3 43389823 43389823 1 + C T UCEC 43389821 + 43389801 43389841 41 ACGTGGAAAATGTGCATTAGCTCCACAGGGAATGCAGGGCA ACGTGGAAAATGTGCATTAGCTTCACAGGGAATGCAGGGCA < 41bp 0.739781184253196 0.453797287319621 0.776389 0.18863526 prediction 0.479562368506391 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389821 chr3:43389823 nonsynonymous SNV 0.258 1 23 hm5C_associated_SNPs_69360 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:43389806-43389833
64251 chr19 38692595 38692595 1 + T C UCEC 38692594 + 38692574 38692614 41 CTGTCCACAGCCACCTGAGCCTGGAGAGGGGACCCCCGACC CTGTCCACAGCCACCTGAGCCCGGAGAGGGGACCCCCGACC < 41bp 0.761078499670426 0.52129780795353 0.37916154 0.5279292 prediction 0.479561383433792 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38692594 chr19:38692595 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_69361 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38692587-38692608
64251 chr11 36631673 36631673 1 + G T UCEC 36631670 + 36631650 36631690 41 AGGAATGTCTGCCCATATGTCAGGATTGGAAATAATGGATG AGGAATGTCTGCCCATATGTCAGTATTGGAAATAATGGATG < 41bp 0.739777006392007 0.425503937418065 0.28941298 0.02277413 prediction 0.479554012784013 Functional Loss - C11orf74 ENSG00000166352 CDS Human protein_coding chr11:36631670 chr11:36631673 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_69364 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:36631652-36631678
64251 chr4 106193843 106193843 1 + G T COAD 106193841 + 106193821 106193861 41 AGTTTGGGAGTGTGGAAGCTCAGGAGGAGAAAAAACGGAGT AGTTTGGGAGTGTGGAAGCTCATGAGGAGAAAAAACGGAGT < 41bp 0.73976727503229 0.415848262421221 0.8697225 0.45976737 prediction 0.47953455006458 Functional Loss - TET2 ENSG00000168769 CDS Human protein_coding chr4:106193841 chr4:106193843 nonsynonymous SNV 0.889 3 23 hm5C_associated_SNPs_69368 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:106193820-106193849
64251 chr11 66262925 66262925 1 + G A SKCM 66262922 + 66262902 66262942 41 GAAGAGTGCCGGGCTGAGAGCGTGGGTCTCTACCTCTGTCT GAAGAGTGCCGGGCTGAGAGCGTAGGTCTCTACCTCTGTCT < 41bp 0.73976235347533 0.482911360618186 0.9273554 0.81131554 prediction 0.47952470695066 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66262922 chr11:66262925 synonymous SNV . 0 24 hm5C_associated_SNPs_69369 0 0 1 PPIG POSTAR2 ENCODE chr11:66262906-66262954
64251 chr6 7727753 7727753 1 + G A rs531373129 7727750 + 7727730 7727770 41 CGCTCAACCGCAAGAGCCTTCTGGCCCCCGGATCTGGCAGC CGCTCAACCGCAAGAGCCTTCTGACCCCCGGATCTGGCAGC < 41bp 0.739756337206888 0.494732948920271 0.41338167 0.4159081 prediction 0.479512674413776 Functional Loss - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7727750 chr6:7727753 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_69370 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7727740-7727805
64251 chr10 126186628 126186628 1 + G A UCEC 126186625 + 126186605 126186645 41 TATGCCTGTGGCATCAAAGCCGAGGTGGTGGGGAAGCCTTC TATGCCTGTGGCATCAAAGCCGAAGTGGTGGGGAAGCCTTC < 41bp 0.746879102049576 0.507129212753696 0.662554 0.38715392 prediction 0.479499778591762 Functional Loss - LHPP ENSG00000107902 CDS Human protein_coding chr10:126186625 chr10:126186628 synonymous SNV . 0 24 hm5C_associated_SNPs_69371 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:126186619-126186652
64251 chr11 134229019 134229019 1 + G A LUSC 134229016 + 134228996 134229036 41 GACAACAAGGATGGGCTGAGCAAGGGGATTGTCCAGGGAGG GACAACAAGGATGGGCTGAGCAAAGGGATTGTCCAGGGAGG < 41bp 0.75990932604707 0.520170924690745 0.880004 0.4101351 prediction 0.47947680271265 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134229016 chr11:134229019 synonymous SNV . 0 24 hm5C_associated_SNPs_69374 0 0 3 BUD13 POSTAR2 ENCODE chr11:134228963-134229040
64251 chr19 44612139 44612139 1 + C T BRCA 44612137 + 44612117 44612157 41 GGGAAGGGCTTCAGCTGGTCCTCAACTCGTCTGACCCATCA GGGAAGGGCTTCAGCTGGTCCTTAACTCGTCTGACCCATCA < 41bp 0.739738357084364 0.473200188199395 0.12515706 0.112775415 prediction 0.479476714168727 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612137 chr19:44612139 nonsynonymous SNV 0.005 2 23 hm5C_associated_SNPs_69375 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44612106-44612139
64251 chr22 32302401 32302401 1 + C T COAD 32302399 + 32302379 32302419 41 GATCGGCTGCTGAAGGACTTCACGGACTTCTGCATCAACCG GATCGGCTGCTGAAGGACTTCATGGACTTCTGCATCAACCG < 41bp 0.752380670169184 0.51264273994859 0.077999264 0.019932121 prediction 0.479475860441188 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32302399 chr22:32302401 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_69376 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr22:32302395-32302419
64251 chr10 75551827 75551827 1 + G T THYM 75551825 + 75551805 75551845 41 AGCTGGCACTGTGCTGGGCCCGGGCCCTGCCCTCTCGGCCA AGCTGGCACTGTGCTGGGCCCGTGCCCTGCCCTCTCGGCCA < 41bp 0.739737521296296 0.386960196043377 0.27069157 0.056689978 prediction 0.479475042592593 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75551825 chr10:75551827 synonymous SNV . 0 23 hm5C_associated_SNPs_69377 0 0 5 DDX42 POSTAR2 ENCODE chr10:75551810-75551872
64251 chr14 103573136 103573136 1 + C T GBM 103573134 + 103573114 103573154 41 CTCCCCAGGACCAGTCTTCTCTCCAGGTTCCCAGGAACCCA CTCCCCAGGACCAGTCTTCTCTTCAGGTTCCCAGGAACCCA < 41bp 0.815020809084141 0.575285731685879 0.9337234 0.4090501 prediction 0.479470154796523 Functional Loss - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103573134 chr14:103573136 nonsynonymous SNV 0.562 1 23 hm5C_associated_SNPs_69379 0 0 4 SF3B4 POSTAR2 ENCODE chr14:103573063-103573196
64251 chr1 45480642 45480642 1 + G T STAD 45480640 + 45480620 45480660 41 TGGGGAAGACGGTGACATTGCAGGGCAACCTGGACCCCTGT TGGGGAAGACGGTGACATTGCATGGCAACCTGGACCCCTGT < 41bp 0.883168893356292 0.643434392375075 0.91211283 0.61870265 prediction 0.479469001962432 Functional Loss - UROD ENSG00000126088 CDS Human protein_coding chr1:45480640 chr1:45480642 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_69380 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45480629-45480663
64251 chr2 219114099 219114099 1 + G A UCEC 219114096 + 219114076 219114116 41 TCCGCCTTCAGTGCTGTTCCCTCGTCACACCAATGCCAGTG TCCGCCTTCAGTGCTGTTCCCTCATCACACCAATGCCAGTG < 41bp 0.740957713744079 0.501236974147971 0.10536742 0.11913502 prediction 0.479441479192217 Functional Loss - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219114096 chr2:219114099 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_69386 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:219114094-219114110
64251 chr15 90168761 90168761 1 + C T UCEC 90168759 + 90168739 90168779 41 CCATCTTGGAGGATTTTGAGCTCGAGGGAGTGTGCCAGCTC CCATCTTGGAGGATTTTGAGCTTGAGGGAGTGTGCCAGCTC < 41bp 0.809822715103813 0.570102455331759 0.36304075 0.395287 prediction 0.479440519544107 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90168759 chr15:90168761 synonymous SNV . 0 23 hm5C_associated_SNPs_69387 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr15:90168705-90168766
64251 chr8 37996541 37996541 1 + C T ESCA 37996539 + 37996519 37996559 41 CCCTGGCTGACGTCTTGTATCACGTGGAGACAGAAGTGGAT CCCTGGCTGACGTCTTGTATCATGTGGAGACAGAAGTGGAT < 41bp 0.79474907640734 0.555042488428999 0.50109 0.62696266 prediction 0.479413175956682 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37996539 chr8:37996541 synonymous SNV . 0 23 hm5C_associated_SNPs_69390 0 0 3 IGF2BP1 POSTAR2 ENCODE chr8:37996518-37996594
64251 chr2 219301981 219301981 1 + C T LUAD 219301979 + 219301959 219301999 41 TCATTGTGGTGAAGCAGGGACACGAGCCCCCCACCTTCACA TCATTGTGGTGAAGCAGGGACATGAGCCCCCCACCTTCACA < 41bp 0.81669039215845 0.576998475495247 0.1491647 0.21185353 prediction 0.479383833326406 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219301979 chr2:219301981 synonymous SNV . 0 23 hm5C_associated_SNPs_69396 0 0 3 GRWD1 POSTAR2 ENCODE chr2:219301970-219302009
64251 chr9 110081092 110081092 1 + G T GBM 110081089 + 110081069 110081109 41 TCATGTCAATGGGCTATGAACGAGAGCAAGTAATTGCAGCC TCATGTCAATGGGCTATGAACGATAGCAAGTAATTGCAGCC < 41bp 0.917916047257681 0.678225506258613 0.7832682 0.09907398 prediction 0.479381081998136 Functional Loss - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110081089 chr9:110081092 stopgain 1.000 1 24 hm5C_associated_SNPs_69397 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:110081032-110081115
64251 chr15 41105974 41105974 1 + C T LUSC 41105972 + 41105952 41105992 41 CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCC CATCCCTGCAGAGCAGGCTTCTTGACCCTGGACGCAACCCC < 41bp 0.830963146371715 0.591279156339453 0.46839112 0.2819209 prediction 0.479367980064525 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41105972 chr15:41105974 stopgain 0.001 0 23 hm5C_associated_SNPs_69399 0 0 5 BUD13 POSTAR2 ENCODE chr15:41105921-41106013
64251 chr19 44777859 44777859 1 + G A DLBC 44777856 + 44777836 44777876 41 CTACAGATGTCAGGTATATGCCCGGAGCTCCAACCAGAACT CTACAGATGTCAGGTATATGCCCAGAGCTCCAACCAGAACT < 41bp 0.771922837876468 0.532239531475354 0.385927 0.10322723 prediction 0.479366612802228 Functional Loss - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44777856 chr19:44777859 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_69401 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:44777850-44777865
64251 chr19 50386036 50386036 1 + C T SKCM 50386034 + 50386014 50386054 41 CCTGCAGGTGGAGCTGGGGCCTCGGCCAACCGTGGAGCGGG CCTGCAGGTGGAGCTGGGGCCTTGGCCAACCGTGGAGCGGG < 41bp 0.786694300136566 0.547013739811782 0.8887005 0.8477884 prediction 0.479361120649567 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386034 chr19:50386036 nonsynonymous SNV 0.045 4 23 hm5C_associated_SNPs_69403 0 0 5 DDX24 POSTAR2 ENCODE chr19:50386018-50386071
64251 chr8 95993116 95993116 1 + G T rs555956218 95993113 + 95993093 95993133 41 CTCAACAACCCATGAAGTGTCTGGAGCTCCACCCTCTGCTC CTCAACAACCCATGAAGTGTCTGTAGCTCCACCCTCTGCTC < 41bp 0.739675573636652 0.404793039320621 0.5636981 0.08838269 prediction 0.479351147273305 Functional Loss - TP53INP1;NDUFAF6 ENSG00000156170 UTR5 Human protein_coding chr8:95993113 chr8:95993116 . . 0 24 hm5C_associated_SNPs_69404 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:95993072-95993125
64251 chr6 160523631 160523631 1 + C T UCEC 160523629 + 160523609 160523649 41 GAACGGAGCCAGGCAGTCGGCGCGGTGCTCAGCCTGCTGCT GAACGGAGCCAGGCAGTCGGCGTGGTGCTCAGCCTGCTGCT < 41bp 0.755902177036008 0.516232115149306 0.90563655 0.87835824 prediction 0.479340123773405 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160523629 chr6:160523631 nonsynonymous SNV 0.586 0 23 hm5C_associated_SNPs_69406 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:160523610-160523635
64251 chr2 204193298 204193298 1 + G C LUAD 204193297 + 204193277 204193317 41 GGGGGCCGCCGGGCCCTCTTCGACAGCTACACAAATCTGGA GGGGGCCGCCGGGCCCTCTTCCACAGCTACACAAATCTGGA < 41bp 0.837727392011676 0.598058001486973 0.76165617 0.5504002 prediction 0.479338781049407 Functional Loss - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204193297 chr2:204193298 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_69407 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:204193221-204193315
64251 chr19 16976291 16976291 1 + G A KICH 16976288 + 16976268 16976308 41 AAGTGTGCAGAAGAAGCTATCTCGGATGGCGCCGGAAGACC AAGTGTGCAGAAGAAGCTATCTCAGATGGCGCCGGAAGACC < 41bp 0.757709239000007 0.518043683596141 0.6944169 0.10293648 prediction 0.479331110807732 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976288 chr19:16976291 nonsynonymous SNV 0.526 3 24 hm5C_associated_SNPs_69408 0 0 9 GRWD1 POSTAR2 ENCODE chr19:16976269-16976357
64251 chr17 8167625 8167625 1 + C T SKCM 8167623 + 8167603 8167643 41 CAACCCCTGTGGACCTGGAGCTCGAATGGGTGCTGGGCAAG CAACCCCTGTGGACCTGGAGCTTGAATGGGTGCTGGGCAAG < 41bp 0.824596969822752 0.584938043017343 0.13408473 0.14326927 prediction 0.479317853610817 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167623 chr17:8167625 synonymous SNV . 0 23 hm5C_associated_SNPs_69413 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:8167592-8167626
64251 chr12 49742816 49742816 1 + G A SKCM 49742813 + 49742793 49742833 41 CTGGGAGTTCTGGAAGCTCCCAAGCTTTGTAGCTCAGGCCA CTGGGAGTTCTGGAAGCTCCCAAACTTTGTAGCTCAGGCCA < 41bp 0.739657648815178 0.486608247128721 0.60761124 0.32431012 prediction 0.479315297630356 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742813 chr12:49742816 nonsynonymous SNV 0.959 1 24 hm5C_associated_SNPs_69414 0 0 2 EFTUD2 POSTAR2 ENCODE chr12:49742763-49742841
64251 chr17 38430155 38430155 1 + C T SKCM 38430153 + 38430133 38430173 41 GAGCCGAGGAAAGCCCCCACCTCCACCCTCAAGGACGCCAG GAGCCGAGGAAAGCCCCCACCTTCACCCTCAAGGACGCCAG < 41bp 0.844682384109452 0.605032985786217 0.91267437 0.31661734 prediction 0.47929879664647 Functional Loss - WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38430153 chr17:38430155 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_69419 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:38430116-38430156
64251 chr16 8868783 8868783 1 + G T LUAD 8868781 + 8868761 8868801 41 CTTGGTGGACGAGGTCCAGACCGGAGGAGGCTGCACGGGCA CTTGGTGGACGAGGTCCAGACCTGAGGAGGCTGCACGGGCA < 41bp 0.901104515436372 0.661460499090252 0.91370547 0.61509895 prediction 0.47928803269224 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8868781 chr16:8868783 stopgain 0.631 1 23 hm5C_associated_SNPs_69420 0 0 4 BUD13 POSTAR2 ENCODE chr16:8868682-8868825
64251 chr16 31120598 31120598 1 + G A READ 31120595 + 31120575 31120615 41 CCCGGGGGCGGGCTTCCGCTCCGGCCCCTCCTGGGACCCGC CCCGGGGGCGGGCTTCCGCTCCGACCCCTCCTGGGACCCGC < 41bp 0.764713726559776 0.525079750770421 0.56010413 0.22421205 prediction 0.47926795157871 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31120595 chr16:31120598 synonymous SNV . 0 24 hm5C_associated_SNPs_69423 0 0 2 DDX3X POSTAR2 ENCODE chr16:31120570-31120616
64251 chr3 131101048 131101048 1 + C T UCEC 131101046 + 131101026 131101066 41 GCACTGACTACCGCAGCTCCCACGTCGGGTCAGGGCCACGC GCACTGACTACCGCAGCTCCCATGTCGGGTCAGGGCCACGC < 41bp 0.754845892086208 0.515216413533082 0.1300669 0.1428115 prediction 0.479258957106252 Functional Loss - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131101046 chr3:131101048 synonymous SNV . 0 23 hm5C_associated_SNPs_69425 0 0 1 DDX3X POSTAR2 ENCODE chr3:131101000-131101068
64251 chr11 64972320 64972320 1 + G A rs374582196 64972317 + 64972297 64972337 41 GACATGGAGACTATTGGCTTCGCGGTCTACGAGGTCAGGAG GACATGGAGACTATTGGCTTCGCAGTCTACGAGGTCAGGAG < 41bp 0.73962903276752 0.497312534797739 0.7026802 0.25075835 prediction 0.47925806553504 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64972317 chr11:64972320 synonymous SNV . 0 24 hm5C_associated_SNPs_69426 0 0 4 BUD13 POSTAR2 ENCODE chr11:64972305-64972342
64251 chr3 51673569 51673569 1 + G T UCEC 51673566 + 51673546 51673586 41 CCACCACAGGGAACAAAAGGCAAGGGAGAGGATAGCACCTT CCACCACAGGGAACAAAAGGCAATGGAGAGGATAGCACCTT < 41bp 0.739625453353575 0.477697823709941 0.46114585 0.22103721 prediction 0.479250906707149 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51673566 chr3:51673569 nonsynonymous SNV 0.881 5 24 hm5C_associated_SNPs_69427 0 0 2 PPIG POSTAR2 ENCODE chr3:51673450-51673574
64251 chr1 171756913 171756913 1 + G T LUSC 171756910 + 171756890 171756930 41 GTGGGTGGGGACATTGGGGTCCGGACCGTTCAGCACCAAGA GTGGGTGGGGACATTGGGGTCCGTACCGTTCAGCACCAAGA < 41bp 0.739622269942237 0.339896946100207 0.31192103 0.10334039 prediction 0.479244539884474 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171756910 chr1:171756913 synonymous SNV . 0 24 hm5C_associated_SNPs_69430 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171756902-171756917
64251 chr1 171756912 171756912 1 + G T LUSC 171756910 + 171756890 171756930 41 GTGGGTGGGGACATTGGGGTCCGGACCGTTCAGCACCAAGA GTGGGTGGGGACATTGGGGTCCTGACCGTTCAGCACCAAGA < 41bp 0.739622269942237 0.389847820371902 0.31192103 0.11558744 prediction 0.479244539884474 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171756910 chr1:171756912 nonsynonymous SNV 0.874 4 23 hm5C_associated_SNPs_69431 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171756902-171756917
64251 chr16 58550418 58550418 1 + A C UCEC 58550417 + 58550397 58550437 41 CCGGTGCCTGCTCCAGGGCACAGGCGTACCTGAGGCCGTGG CCGGTGCCTGCTCCAGGGCACCGGCGTACCTGAGGCCGTGG < 41bp 0.797265612834488 0.557654151943674 0.8978199 0.7774159 prediction 0.479222921781627 Functional Loss - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550417 chr16:58550418 synonymous SNV . 0 22 hm5C_associated_SNPs_69436 0 0 2 EIF3H POSTAR2 ENCODE chr16:58550347-58550428
64251 chr8 363212 363212 1 + A T STAD 363208 + 363188 363228 41 AACCGTTGTAACATCAGTCACAGCATGTAAGTTACAGCTGA AACCGTTGTAACATCAGTCACAGCTTGTAAGTTACAGCTGA < 41bp 0.739608442533453 0.419696040154872 0.32449818 0.25116837 prediction 0.479216885066905 Functional Loss - FBXO25 ENSG00000147364 CDS Human protein_coding chr8:363208 chr8:363212 nonsynonymous SNV 0.925 0 25 hm5C_associated_SNPs_69441 0 0 1 GRWD1 POSTAR2 ENCODE chr8:363091-363216
64251 chr1 45101804 45101804 1 + G A COAD 45101801 + 45101781 45101821 41 GGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAA GGTGTGGACAGAAGCGGATACGGACCACCACTCTCCTGGAA < 41bp 0.740883822680669 0.501276697827777 0.7528006 0.36250094 prediction 0.479214249705783 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101801 chr1:45101804 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_69442 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:45101789-45101813
64251 chr19 36124047 36124047 1 + G A BLCA 36124044 + 36124024 36124064 41 TACGGCCCCCTCACCAGGCCCTCGTGGGCCCCCCTCTGCCT TACGGCCCCCTCACCAGGCCCTCATGGGCCCCCCTCTGCCT < 41bp 0.760686351301813 0.521084424748908 0.3427631 0.22044045 prediction 0.47920385310581 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124044 chr19:36124047 nonsynonymous SNV 0.854 3 24 hm5C_associated_SNPs_69446 0 0 3 FMR1 POSTAR2 ENCODE chr19:36124033-36124075
64251 chr16 29848270 29848270 1 + C T STAD 29848268 + 29848248 29848288 41 AGAATCAGCTGGGGCAGAAGCGCGTGGTCAAGGTGAGGTCC AGAATCAGCTGGGGCAGAAGCGTGTGGTCAAGGTGAGGTCC < 41bp 0.739600782235584 0.483837546832979 0.7822689 0.36547652 prediction 0.479201564471168 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29848268 chr16:29848270 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_69447 0 0 2 PRPF8 POSTAR2 ENCODE chr16:29848248-29848327
64251 chr14 65197874 65197874 1 + C T SARC 65197872 + 65197852 65197892 41 ATGAAGAGGAGGCATGAGCACGCGGTCCGGCTCCAGGTGCT ATGAAGAGGAGGCATGAGCACGTGGTCCGGCTCCAGGTGCT < 41bp 0.784457145339143 0.544856990969123 0.72324413 0.61737806 prediction 0.47920030874004 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65197872 chr14:65197874 nonsynonymous SNV 0.440 5 23 hm5C_associated_SNPs_69448 0 0 4 PPIG POSTAR2 ENCODE chr14:65197826-65197883
64251 chr1 29365931 29365931 1 + C T UCEC 29365929 + 29365909 29365949 41 GTAAACGGGCGTCCCGGAGCCTCGATGGAGGTTTGTATTGA GTAAACGGGCGTCCCGGAGCCTTGATGGAGGTTTGTATTGA < 41bp 0.83919095266713 0.599591752848764 0.90575397 0.26242098 prediction 0.479198399636732 Functional Loss - EPB41 ENSG00000159023 CDS Human protein_coding chr1:29365929 chr1:29365931 synonymous SNV . 0 23 hm5C_associated_SNPs_69449 0 0 2 GRWD1 POSTAR2 ENCODE chr1:29365905-29365938
64251 chr10 96353272 96353272 1 + C T COAD 96353270 + 96353250 96353290 41 TTTTAGATGCACAGCTTCAACACGGATCCAGAGGTGTTTAT TTTTAGATGCACAGCTTCAACATGGATCCAGAGGTGTTTAT < 41bp 0.805248016678216 0.565668561144644 0.41297445 0.35392272 prediction 0.479158911067144 Functional Loss - HELLS ENSG00000119969 CDS Human protein_coding chr10:96353270 chr10:96353272 nonsynonymous SNV 0.875 1 23 hm5C_associated_SNPs_69453 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chr10:96353260-96353280
64251 chr12 57883081 57883081 1 + G A HNSC 57883078 + 57883058 57883098 41 TTTTGTTATCTGGCTGGGAGCAAGATGACCTCACTAACCAG TTTTGTTATCTGGCTGGGAGCAAAATGACCTCACTAACCAG < 41bp 0.745870077713035 0.506297797982594 0.7422816 0.40246683 prediction 0.479144559460881 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57883078 chr12:57883081 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_69455 0 0 32 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:57883013-57883157
64251 chr17 80013096 80013096 1 + C T COAD 80013094 + 80013074 80013114 41 CTCACCAAGCTCAAGTGTGCCGCAGGTGAGGGCCTGGGTCA CTCACCAAGCTCAAGTGTGCCGTAGGTGAGGGCCTGGGTCA < 41bp 0.765058540608911 0.525497907832166 0.7343581 0.66850567 prediction 0.47912126555349 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80013094 chr17:80013096 nonsynonymous SNV 0.601 4 23 hm5C_associated_SNPs_69461 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80013072-80013099
64251 chr16 2546467 2546467 1 + G T SARC 2546465 + 2546445 2546485 41 CGCAGGTGCCCAGCTACTGCCTGAATGCACGCGGCGAGGGG CGCAGGTGCCCAGCTACTGCCTTAATGCACGCGGCGAGGGG < 41bp 0.739550042014736 0.387098600878132 0.1590758 0.091344655 prediction 0.479100084029471 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546465 chr16:2546467 synonymous SNV . 0 23 hm5C_associated_SNPs_69467 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2546467-2546497
64251 chr11 62557492 62557492 1 + C T BLCA 62557490 + 62557470 62557510 41 GGAGCTCTGAGACAGATGCTCTCGTTGGGTCACGCCTTTCC GGAGCTCTGAGACAGATGCTCTTGTTGGGTCACGCCTTTCC < 41bp 0.739548977537471 0.481113618741211 0.1614064 0.13799956 prediction 0.479097955074942 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62557490 chr11:62557492 synonymous SNV . 0 23 hm5C_associated_SNPs_69468 0 0 14 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr11:62557480-62557500
64251 chr3 69134355 69134355 1 + A C COAD 69134354 + 69134334 69134374 41 AACTACCTGGTGGTGGCTGCCATGATGATTTCCATTGTGGG AACTACCTGGTGGTGGCTGCCCTGATGATTTCCATTGTGGG < 41bp 0.765656413183898 0.526107446072668 0.1198833 0.03608361 prediction 0.479097934222461 Functional Loss - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69134354 chr3:69134355 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_69469 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:69134282-69134360
64251 chr19 58370655 58370655 1 + G A UCEC 58370652 + 58370632 58370672 41 TCAACATCAGCGAGTCCACACTGGACAGACAGCTTATCCCT TCAACATCAGCGAGTCCACACTGAACAGACAGCTTATCCCT < 41bp 0.749049369007638 0.50951615435931 0.120351255 0.030564189 prediction 0.479066429296657 Functional Loss - ZNF587 ENSG00000198466 CDS Human protein_coding chr19:58370652 chr19:58370655 nonsynonymous SNV 0.016 2 24 hm5C_associated_SNPs_69476 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr19:58370628-58370666
64251 chr19 45452429 45452429 1 + A C rs5126 45452428 + 45452408 45452448 41 CTCCCCAGGGACTTGTACAGCAAAAGCACAGCAGCCATGAG CTCCCCAGGGACTTGTACAGCCAAAGCACAGCAGCCATGAG < 41bp 0.73952999352334 0.481242590517937 0.21644565 0.15529072 prediction 0.479059987046681 Functional Loss - APOC2 ENSG00000224916;ENSG00000234906 CDS Human other chr19:45452428 chr19:45452429 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_69478 1 0 2 DDX55 POSTAR2 ENCODE chr19:45452415-45452451
64251 chr14 65208079 65208079 1 + G A KIRC 65208076 + 65208056 65208096 41 GCGATTTGTCAGCAGCTTCTCTCGGCGGAGCAGCGTGGCAC GCGATTTGTCAGCAGCTTCTCTCAGCGGAGCAGCGTGGCAC < 41bp 0.774824141632108 0.535303504792478 0.0782989 0.07014459 prediction 0.479041273679258 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65208076 chr14:65208079 nonsynonymous SNV 0.993 5 24 hm5C_associated_SNPs_69482 0 0 1 PPIG POSTAR2 ENCODE chr14:65207940-65208101
64251 chr1 22903296 22903296 1 + C T GBM 22903294 + 22903274 22903314 41 ACACCCAAGATGTACTGCAGCGCGGAGGGCGAGTGGCTCGT ACACCCAAGATGTACTGCAGCGTGGAGGGCGAGTGGCTCGT < 41bp 0.773579489132939 0.534061221734607 0.2651288 0.36259145 prediction 0.479036534796663 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22903294 chr1:22903296 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_69483 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:22903280-22903318
64251 chr8 87570619 87570619 1 + C T UCEC 87570617 + 87570597 87570637 41 CTTCCTCCCAAGAACCCAGCCACGAAACAACAGAAGCAGTG CTTCCTCCCAAGAACCCAGCCATGAAACAACAGAAGCAGTG < 41bp 0.739517921892929 0.468259948086545 0.04027942 0.08873731 prediction 0.479035843785858 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87570617 chr8:87570619 nonsynonymous SNV 0.066 1 23 hm5C_associated_SNPs_69484 0 0 2 IGF2BP1 POSTAR2 ENCODE chr8:87570573-87570654
64251 chr4 37848880 37848880 1 + G T LUSC 37848877 + 37848857 37848897 41 GAGCCAAACAGCTAATAGACCAGGGGAAAACTGTTTTATTT GAGCCAAACAGCTAATAGACCAGTGGAAAACTGTTTTATTT < 41bp 0.739517512716165 0.366883565886936 0.928244 0.9012754 prediction 0.479035025432331 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37848877 chr4:37848880 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_69485 0 0 1 PRPF8 POSTAR2 ENCODE chr4:37848723-37848884
64251 chr17 45009511 45009511 1 + G C HNSC 45009507 + 45009487 45009527 41 CTTCCAGCATCGGCGCCATGCAAGGGAGCAGCAGGAGAGAC CTTCCAGCATCGGCGCCATGCAAGCGAGCAGCAGGAGAGAC < 41bp 0.837869407301547 0.598354866363443 0.4325916 0.21686587 prediction 0.479029081876206 Functional Loss - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45009507 chr17:45009511 nonsynonymous SNV 0.113 3 25 hm5C_associated_SNPs_69487 0 0 1 UCHL5 POSTAR2 ENCODE chr17:45009474-45009562
64251 chr7 36324387 36324387 1 + C T CESC 36324385 + 36324365 36324405 41 AGAGCTCGCCAAGCAACGGGCACGGGAAGCTGGCGGGCCCC AGAGCTCGCCAAGCAACGGGCATGGGAAGCTGGCGGGCCCC < 41bp 0.772375507368485 0.532864783300977 0.6049683 0.582288 prediction 0.479021448135016 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36324385 chr7:36324387 synonymous SNV . 0 23 hm5C_associated_SNPs_69489 0 0 4 GRWD1 POSTAR2 ENCODE chr7:36324306-36324390
64251 chr21 15599511 15599511 1 + A T LAML 15599507 + 15599487 15599527 41 ACCTTTATCAGATGAATAAACGAAAGAGACAAAAGCAAACA ACCTTTATCAGATGAATAAACGAATGAGACAAAAGCAAACA < 41bp 0.864841969906932 0.625333956571138 0.7549239 0.8638352 prediction 0.479016026671589 Functional Loss - RBM11 ENSG00000185272 CDS Human protein_coding chr21:15599507 chr21:15599511 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_69490 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr21:15599510-15599542
64251 chr7 142562309 142562309 1 + G T SKCM 142562307 + 142562287 142562327 41 AGAGACGCAGGCCAGTGGGGCTGGGGGGGCCTCCCTGGTGG AGAGACGCAGGCCAGTGGGGCTTGGGGGGCCTCCCTGGTGG < 41bp 0.898492461911829 0.658984568074043 0.88225865 0.7906697 prediction 0.479015787675573 Functional Loss - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142562307 chr7:142562309 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_69491 0 0 2 RBM15 POSTAR2 ENCODE chr7:142562276-142562374
64251 chr19 18961640 18961640 1 + C T UCEC 18961638 + 18961618 18961658 41 CAGCTGCGGGCACGCCAGATCACGGCACAGCAGATCAACAA CAGCTGCGGGCACGCCAGATCATGGCACAGCAGATCAACAA < 41bp 0.739506727210219 0.476430514632211 0.82894874 0.84139335 prediction 0.479013454420438 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961638 chr19:18961640 nonsynonymous SNV 0.868 4 23 hm5C_associated_SNPs_69492 0 0 1 PPIG POSTAR2 ENCODE chr19:18961608-18961644
64251 chr16 28995161 28995161 1 + G A UCEC 28995158 + 28995138 28995178 41 CCTCCTTCTTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTC CCTCCTTCTTGTCCGAGTTCCGGACTCTGCAGTTCTCGCTC < 41bp 0.76601394194962 0.526519969476693 0.93599856 0.87356716 prediction 0.478987944945854 Functional Loss - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28995158 chr16:28995161 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_69501 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:28995107-28995258
64251 chr2 96874307 96874307 1 - C G rs7559215 96874308 - 96874288 96874328 41 TGGCTGCAGAGACAGATGAGCGGCGGCTCCTGGCCGCGGGA TGGCTGCAGAGACAGATGAGCCGCGGCTCCTGGCCGCGGGA < 41bp 0.77583629264719 0.536347632738565 0.85263145 0.483629 prediction 0.478977319817251 Functional Loss - STARD7-AS1 ENSG00000204685 ncRNA_exonic Human processed_transcript chr2:96874308 chr2:96874307 . . 0 22 hm5C_associated_SNPs_69502 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:96874300-96874320
64251 chr2 192194745 192194745 1 + A C SKCM 192194744 + 192194724 192194764 41 CATTACTGGGGAAAGTGGAGCAGGAAAAACAGGTAAGGCTC CATTACTGGGGAAAGTGGAGCCGGAAAAACAGGTAAGGCTC < 41bp 0.739471872227315 0.476539866528452 0.9158665 0.90887856 prediction 0.47894374445463 Functional Loss - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192194744 chr2:192194745 synonymous SNV . 0 22 hm5C_associated_SNPs_69509 0 0 3 BUD13 POSTAR2 ENCODE chr2:192194718-192194781
64251 chr17 42255005 42255005 1 - G A COAD 42255007 - 42254987 42255027 41 ATTAAGCAGGACTTCCAGGGCCCGAGGGAAGTTGGCGCAGT ATTAAGCAGGACTTCCAGGGCCTGAGGGAAGTTGGCGCAGT < 41bp 0.790423630247297 0.550955171885522 0.70306855 0.79658544 prediction 0.47893691672355 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42255007 chr17:42255005 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_69512 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:42254951-42255037
64251 chr11 12530148 12530148 1 + C T SKCM 12530146 + 12530126 12530166 41 TTCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAA TTCAGAAACGAGAAGGAATCCTTCAGTCTCGGCAAATCCAA < 41bp 0.739465918074205 0.429723826069508 0.9200511 0.14837837 prediction 0.47893183614841 Functional Loss - PARVA ENSG00000197702 CDS Human protein_coding chr11:12530146 chr11:12530148 synonymous SNV . 0 23 hm5C_associated_SNPs_69513 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:12530141-12530166
64251 chr8 73849624 73849624 1 + C T MESO 73849622 + 73849602 73849642 41 CAGTTGACATAACTGTGAACCTCGATGCCAGTGGCTCCCAG CAGTTGACATAACTGTGAACCTTGATGCCAGTGGCTCCCAG < 41bp 0.739463998874897 0.463501664088099 0.87456423 0.16713691 prediction 0.478927997749793 Functional Loss - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73849622 chr8:73849624 synonymous SNV . 0 23 hm5C_associated_SNPs_69515 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:73849602-73849640
64251 chr2 27151139 27151139 1 + T C GBM 27151138 + 27151118 27151158 41 TCCAGGGTGCTAAGGAGGCACTGGATTTGGGGATCACAGGC TCCAGGGTGCTAAGGAGGCACCGGATTTGGGGATCACAGGC < 41bp 0.756323189775859 0.516865808133587 0.46581203 0.38022313 prediction 0.478914763284545 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27151138 chr2:27151139 nonsynonymous SNV 0.951 4 22 hm5C_associated_SNPs_69517 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27151133-27151162
64251 chr20 25261606 25261606 1 + G A rs141916716 25261603 + 25261583 25261623 41 AGCACGTGGCCGCGCTGTTTCCCGGCGATGTGGACCGCCTG AGCACGTGGCCGCGCTGTTTCCCAGCGATGTGGACCGCCTG < 41bp 0.7754387155398 0.535981495904906 0.91436386 0.5524051 prediction 0.478914439269787 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25261603 chr20:25261606 nonsynonymous SNV 0.491 2 24 hm5C_associated_SNPs_69518 0 0 5 BUD13 POSTAR2 ENCODE chr20:25261577-25261638
64251 chrX 19373844 19373844 1 + G A BRCA 19373841 + 19373821 19373861 41 CCTGTGCGTCCGAGAGGCAACAAGGTTTGCTGCTGCCTATT CCTGTGCGTCCGAGAGGCAACAAAGTTTGCTGCTGCCTATT < 41bp 0.739456407549602 0.494201393898485 0.67400837 0.20733568 prediction 0.478912815099203 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19373841 chrX:19373844 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_69519 0 0 7 DDX24 POSTAR2 ENCODE chrX:19373815-19373881
64251 chr11 62557493 62557493 1 + G A LUAD 62557490 + 62557470 62557510 41 GGAGCTCTGAGACAGATGCTCTCGTTGGGTCACGCCTTTCC GGAGCTCTGAGACAGATGCTCTCATTGGGTCACGCCTTTCC < 41bp 0.739548977537471 0.50009898187125 0.1614064 0.072965175 prediction 0.478899991332443 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62557490 chr11:62557493 nonsynonymous SNV 0.047 0 24 hm5C_associated_SNPs_69522 0 0 16 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr11:62557480-62557500
64251 chr15 57816816 57816816 1 + T C UCEC 57816815 + 57816795 57816835 41 AGGCCTCCCGTACCTCAACCCTGGAGCTCCAGAACCAGCTG AGGCCTCCCGTACCTCAACCCCGGAGCTCCAGAACCAGCTG < 41bp 0.796529049139196 0.557091125735856 0.023017883 0.1230894 prediction 0.47887584680668 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57816815 chr15:57816816 nonsynonymous SNV 0.617 1 22 hm5C_associated_SNPs_69524 0 0 1 GRWD1 POSTAR2 ENCODE chr15:57816780-57816844
64251 chr3 147130344 147130344 1 + G C HNSC 147130343 + 147130323 147130363 41 GCGAGTTTGAGGGCTGTGACCGGCGCTTCGCTAACAGCAGC GCGAGTTTGAGGGCTGTGACCCGCGCTTCGCTAACAGCAGC < 41bp 0.878242516000788 0.638806224013812 0.9220221 0.3602816 prediction 0.478872583973952 Functional Loss - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147130343 chr3:147130344 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_69525 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:147130323-147130352
64251 chr12 665830 665830 1 + G A rs146749190 665827 + 665807 665847 41 GGCCAGCGCGTGGTGCGGCTCTCGGAGTATGTGTCTGCACG GGCCAGCGCGTGGTGCGGCTCTCAGAGTATGTGTCTGCACG < 41bp 0.767594415813364 0.528159568072899 0.40243185 0.2176593 prediction 0.478869695480929 Functional Loss - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:665827 chr12:665830 synonymous SNV . 0 24 hm5C_associated_SNPs_69527 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr12:665805-665833
64251 chr17 40839921 40839921 1 + G A COAD 40839918 + 40839898 40839938 41 GTCTGGGGGACGGGCTGGGCCACGTGGAGCTGACGCTCAGC GTCTGGGGGACGGGCTGGGCCACATGGAGCTGACGCTCAGC < 41bp 0.77017102281921 0.530738917029728 0.2217142 0.21204868 prediction 0.478864211578965 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40839918 chr17:40839921 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_69528 0 0 3 GRWD1 POSTAR2 ENCODE chr17:40839858-40839950
64251 chr9 131846956 131846956 1 + C T SKCM 131846954 + 131846934 131846974 41 TCTGTCTTGCCAGGTGATCTCTCTGGCCACCTCCTTGCCTA TCTGTCTTGCCAGGTGATCTCTTTGGCCACCTCCTTGCCTA < 41bp 0.815824669322461 0.576393967202246 0.883652 0.7979022 prediction 0.478861404240431 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846954 chr9:131846956 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_69530 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:131846940-131846960
64251 chr17 18141444 18141444 1 + C T OV 18141442 + 18141422 18141462 41 CGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAG CGCTCTCCCGGGTGAAGTCTCTTAAGAAGTCACTGCGCCAG < 41bp 0.834794185959937 0.595367067382007 0.878805 0.79795957 prediction 0.478854237155859 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18141442 chr17:18141444 synonymous SNV . 0 23 hm5C_associated_SNPs_69532 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:18141438-18141462
64251 chr9 139841131 139841131 1 + C T PRAD 139841129 + 139841109 139841149 41 GCGAGGCTGCAGACCAGTTCCACGTCCTGGACGGTGAGTGC GCGAGGCTGCAGACCAGTTCCATGTCCTGGACGGTGAGTGC < 41bp 0.750391014667819 0.510964221755957 0.406016 0.43520984 prediction 0.478853585823725 Functional Loss - C8G ENSG00000176919 CDS Human protein_coding chr9:139841129 chr9:139841131 synonymous SNV . 0 23 hm5C_associated_SNPs_69533 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:139841118-139841163
64251 chr1 2237624 2237624 1 + C T STAD 2237622 + 2237602 2237642 41 GAAGCGGGAGCTGGAGCAGGCGCGGCAGGCCCGGGTGTGCG GAAGCGGGAGCTGGAGCAGGCGTGGCAGGCCCGGGTGTGCG < 41bp 0.76722386609168 0.527799637602642 0.7036832 0.6464564 prediction 0.478848456978075 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2237622 chr1:2237624 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_69537 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2237574-2237643
64251 chr19 56669881 56669881 1 + G A UCEC 56669878 + 56669858 56669898 41 TTCAGGGGCCAGCAGCCTCCCCCGATGGGTCGTCAGCAACG TTCAGGGGCCAGCAGCCTCCCCCAATGGGTCGTCAGCAACG < 41bp 0.760019929104118 0.520599380497447 0.12324616 0.16954917 prediction 0.478841097213342 Functional Loss - ZNF444 ENSG00000167685 CDS Human protein_coding chr19:56669878 chr19:56669881 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_69539 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:56669854-56669882
64251 chr1 95583481 95583481 1 + G T rs538563426 95583479 + 95583459 95583499 41 GCCCGCGGCCCCCGCGCCGCCCGGGCGCCCCGCATTCCTCT GCCCGCGGCCCCCGCGCCGCCCTGGCGCCCCGCATTCCTCT < 41bp 0.739419694633086 0.392692040032286 0.2144998 0.09200731 prediction 0.478839389266172 Functional Loss - TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 UTR5 Human other chr1:95583479 chr1:95583481 . . 0 23 hm5C_associated_SNPs_69540 0 0 1 GEMIN5 POSTAR2 ENCODE chr1:95583426-95583493
64251 chr1 173735414 173735414 1 + C T LUAD 173735412 + 173735392 173735432 41 GCCAGGATGGTGTGTCTTGCCTCAACATTGTTGAGAGGTGA GCCAGGATGGTGTGTCTTGCCTTAACATTGTTGAGAGGTGA < 41bp 0.739414565307389 0.441568378999315 0.37201136 0.13765264 prediction 0.478829130614778 Functional Loss - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173735412 chr1:173735414 synonymous SNV . 0 23 hm5C_associated_SNPs_69543 0 0 1 UCHL5 POSTAR2 ENCODE chr1:173735383-173735425
64251 chr1 24861729 24861729 1 + G T SARC 24861727 + 24861707 24861747 41 GCGCCCCGACCCTCCGACCGCAGCGTTGAATGAGCCCCAGA GCGCCCCGACCCTCCGACCGCATCGTTGAATGAGCCCCAGA < 41bp 0.739413917319801 0.406844073861396 0.42837095 0.17127481 prediction 0.478827834639602 Functional Loss - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24861727 chr1:24861729 nonsynonymous SNV 0.021 1 23 hm5C_associated_SNPs_69544 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:24861704-24861734
64251 chr13 113536219 113536219 1 + G T UCEC 113536216 + 113536196 113536236 41 GGCTACCAGAGCACCTGTCCCTCGGCCGCCTGGTACAGCTC GGCTACCAGAGCACCTGTCCCTCTGCCGCCTGGTACAGCTC < 41bp 0.739410074453919 0.353649712209749 0.24088553 0.17028895 prediction 0.478820148907837 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536216 chr13:113536219 synonymous SNV . 0 24 hm5C_associated_SNPs_69545 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:113536200-113536220
64251 chr10 3189380 3189380 1 + C T rs3740607 3189378 + 3189358 3189398 41 TTAACAAGTGTTTCTTGATACGCGGGAGCTTCCTCAGGATG TTAACAAGTGTTTCTTGATACGTGGGAGCTTCCTCAGGATG < 41bp 0.739401655405082 0.489797002783137 0.035169184 0.11420596 prediction 0.478803310810164 Functional Loss - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189378 chr10:3189380 synonymous SNV . 0 23 hm5C_associated_SNPs_69547 0 1 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:3189362-3189383
64251 chr10 3189381 3189381 1 + G T LIHC 3189378 + 3189358 3189398 41 TTAACAAGTGTTTCTTGATACGCGGGAGCTTCCTCAGGATG TTAACAAGTGTTTCTTGATACGCTGGAGCTTCCTCAGGATG < 41bp 0.739401655405082 0.360598329768529 0.035169184 0.011897773 prediction 0.478803310810164 Functional Loss - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189378 chr10:3189381 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_69548 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:3189362-3189383
64251 chr7 141478735 141478735 1 + G A COAD 141478732 + 141478712 141478752 41 TTCACCACTTGCCTGTACATCACGCTTAGCCAGGCATCACC TTCACCACTTGCCTGTACATCACACTTAGCCAGGCATCACC < 41bp 0.743829063924865 0.504435992163761 0.070611864 0.025779635 prediction 0.478786143522208 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478732 chr7:141478735 synonymous SNV . 0 24 hm5C_associated_SNPs_69549 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:141478660-141478740
64251 chr16 19083337 19083337 1 + G T HNSC 19083335 + 19083315 19083355 41 GCAGCTGTGGATCGAATAATCCGGGTGGATCATGCAGGCGA GCAGCTGTGGATCGAATAATCCTGGTGGATCATGCAGGCGA < 41bp 0.89373153071495 0.654344667854126 0.91481173 0.58380693 prediction 0.478773725721648 Functional Loss - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19083335 chr16:19083337 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_69551 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:19083281-19083339
64251 chr12 14577288 14577288 1 + G T LUAD 14577286 + 14577266 14577306 41 GGATGCCGGAGATCCAGCCTCCGGAGTACTGGCCTCTGGTG GGATGCCGGAGATCCAGCCTCCTGAGTACTGGCCTCTGGTG < 41bp 0.892278728567552 0.652897878653636 0.8944707 0.4186563 prediction 0.478761699827832 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577286 chr12:14577288 stopgain 0.000 0 23 hm5C_associated_SNPs_69552 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14577261-14577298
64251 chr17 41063095 41063095 1 + G T UCEC 41063092 + 41063072 41063112 41 CTGTGGACTCTGGAGAAAGCCCAGAGGTGGTGCGAGCAGCC CTGTGGACTCTGGAGAAAGCCCATAGGTGGTGCGAGCAGCC < 41bp 0.739371281360981 0.348115238360922 0.26330897 0.17114988 prediction 0.478742562721962 Functional Loss - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063092 chr17:41063095 nonsynonymous SNV 0.864 1 24 hm5C_associated_SNPs_69556 0 0 3 RPS3 POSTAR2 ENCODE chr17:41063034-41063251
64251 chr16 19693584 19693584 1 + A C LUAD 19693580 + 19693560 19693600 41 ATGGGGTCCTGTTTCTTGTTCGAGAGCTTCTCAACGTGATC ATGGGGTCCTGTTTCTTGTTCGAGCGCTTCTCAACGTGATC < 41bp 0.739369945333788 0.336132742245728 0.78169906 0.70057666 prediction 0.478739890667576 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19693580 chr16:19693584 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_69558 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:19693579-19693607
64251 chr7 128846133 128846133 1 + G C SKCM 128846129 + 128846109 128846149 41 GGCACCACCTACCAGCCTCTCTCGGGCAAGACCTCCTACTT GGCACCACCTACCAGCCTCTCTCGCGCAAGACCTCCTACTT < 41bp 0.838948525653884 0.599585383627128 0.06627369 0.09346244 prediction 0.478726284053512 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128846129 chr7:128846133 nonsynonymous SNV 0.995 5 25 hm5C_associated_SNPs_69561 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:128846099-128846137
64251 chr22 18640439 18640439 1 + G A UCEC 18640436 + 18640416 18640456 41 TTGGAGTGATCACGAATGAGCAAGGCGTTTGGGCTCCTGAG TTGGAGTGATCACGAATGAGCAAAGCGTTTGGGCTCCTGAG < 41bp 0.785860619405453 0.546499507322366 0.87682784 0.25933802 prediction 0.478722224166175 Functional Loss - USP18 ENSG00000184979 CDS Human protein_coding chr22:18640436 chr22:18640439 synonymous SNV . 0 24 hm5C_associated_SNPs_69563 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr22:18640419-18640446
64251 chr2 131883461 131883461 1 + C T CESC 131883459 + 131883439 131883479 41 ATGGACTGCATCAACATCCGCACGGGGCAGGAATGTCGGGG ATGGACTGCATCAACATCCGCATGGGGCAGGAATGTCGGGG < 41bp 0.770948238659977 0.531593248420971 0.15268579 0.21877131 prediction 0.478709980478011 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131883459 chr2:131883461 nonsynonymous SNV 0.658 0 23 hm5C_associated_SNPs_69565 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:131883446-131883468
64251 chr17 4796018 4796018 1 + G A BRCA 4796015 + 4795995 4796035 41 ACAGCGTCCTTCCAGCCTCTCACGGGCACCTCCCCCAGGCT ACAGCGTCCTTCCAGCCTCTCACAGGCACCTCCCCCAGGCT < 41bp 0.739346979010974 0.485301352136668 0.73204607 0.10595626 prediction 0.478693958021948 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4796015 chr17:4796018 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_69571 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4795991-4796029
64251 chr5 40692295 40692295 1 + A C rs369680474 40692294 + 40692274 40692314 41 ATGGGCCTGGCCCAGGAAGACACCACCTCACTGAGGACTTT ATGGGCCTGGCCCAGGAAGACCCCACCTCACTGAGGACTTT < 41bp 0.76180229340098 0.522456012928917 0.31554505 0.33485544 prediction 0.478692560944126 Functional Loss - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40692294 chr5:40692295 nonsynonymous SNV 0.912 1 22 hm5C_associated_SNPs_69572 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:40692267-40692314
64251 chr1 11728998 11728998 1 + G T BLCA 11728996 + 11728976 11729016 41 CCTCCTGCGCAACCCGTGTGCTGAAGGTGGCATGGGGGCAG CCTCCTGCGCAACCCGTGTGCTTAAGGTGGCATGGGGGCAG < 41bp 0.883152551094844 0.643806463422066 0.4841705 0.3833642 prediction 0.478692175345556 Functional Loss - FBXO6 ENSG00000116663 CDS Human protein_coding chr1:11728996 chr1:11728998 stopgain 0.899 1 23 hm5C_associated_SNPs_69573 0 0 1 UCHL5 POSTAR2 ENCODE chr1:11728905-11729001
64251 chr1 203025622 203025622 1 + G T COAD 203025620 + 203025600 203025640 41 TTGGCCACCCAGCCCTGAGCCAGGAAGAAGGCAAGAGGTAA TTGGCCACCCAGCCCTGAGCCATGAAGAAGGCAAGAGGTAA < 41bp 0.739344548654275 0.390809880062788 0.759894 0.27279282 prediction 0.478689097308549 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203025620 chr1:203025622 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_69574 0 0 1 PPIG POSTAR2 ENCODE chr1:203025575-203025632
64251 chr2 120012348 120012348 1 + C T BRCA 120012346 + 120012326 120012366 41 CTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGT CTGGGAGTGCTGGCCCTCGGCATGTTGTCCCTGCTGGCCGT < 41bp 0.806070854181846 0.566747106602751 0.14226508 0.20996746 prediction 0.478647495158188 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120012346 chr2:120012348 nonsynonymous SNV 0.544 1 23 hm5C_associated_SNPs_69578 0 0 5 RPS3 POSTAR2 ENCODE chr2:120012314-120012364
64251 chr7 1028300 1028300 1 + G A SKCM 1028297 + 1028277 1028317 41 GCGTCTGTGTTGGGGAGCGCCTGGCCAGGACCGAGCTCTTC GCGTCTGTGTTGGGGAGCGCCTGACCAGGACCGAGCTCTTC < 41bp 0.742533172790636 0.503210756630348 0.18288022 0.19469795 prediction 0.478644832320577 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1028297 chr7:1028300 stopgain 0.956 5 24 hm5C_associated_SNPs_69579 0 0 1 SRSF9 POSTAR2 ENCODE chr7:1028263-1028300
64251 chr11 608380 608380 1 + A T GBM 608376 + 608356 608396 41 AGCCGGAAGCCCCACCCAGCCCGGACGTGCTGCAGGCTGCC AGCCGGAAGCCCCACCCAGCCCGGTCGTGCTGCAGGCTGCC < 41bp 0.739304713029653 0.428996896641635 0.30320334 0.3242126 prediction 0.478609426059306 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608376 chr11:608380 nonsynonymous SNV 0.034 1 25 hm5C_associated_SNPs_69587 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr11:608379-608402
64251 chr14 20940627 20940627 1 + C T LGG 20940625 + 20940605 20940645 41 CGGTGAAATCCCCAACTTTCCCCGAAGTACAGGTACTGGCA CGGTGAAATCCCCAACTTTCCCTGAAGTACAGGTACTGGCA < 41bp 0.739291507163809 0.455283806282323 0.43211645 0.25860426 prediction 0.478583014327617 Functional Loss - PNP ENSG00000198805 CDS Human protein_coding chr14:20940625 chr14:20940627 stopgain 0.692 0 23 hm5C_associated_SNPs_69593 1 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20940530-20940628
64251 chr14 20940629 20940629 1 + A T LUAD 20940625 + 20940605 20940645 41 CGGTGAAATCCCCAACTTTCCCCGAAGTACAGGTACTGGCA CGGTGAAATCCCCAACTTTCCCCGTAGTACAGGTACTGGCA < 41bp 0.739291507163809 0.399242970359677 0.43211645 0.30912173 prediction 0.478583014327617 Functional Loss - PNP ENSG00000198805 CDS Human protein_coding chr14:20940625 chr14:20940629 synonymous SNV . 0 25 hm5C_associated_SNPs_69594 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:20940611-20940631
64251 chr19 19576355 19576355 1 + G A UCEC 19576352 + 19576332 19576372 41 TTGCTGAGGGCAACAGAGGCCACGGCCATGGCCATGGGCAG TTGCTGAGGGCAACAGAGGCCACAGCCATGGCCATGGGCAG < 41bp 0.741638298704491 0.502358539938751 0.30839676 0.14082941 prediction 0.478559517531482 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19576352 chr19:19576355 synonymous SNV . 0 24 hm5C_associated_SNPs_69598 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:19576330-19576355
64251 chr3 30713741 30713741 1 + C T STAD 30713739 + 30713719 30713759 41 CAAGCTGGGCAGCTCCCTCGCCCGGGGGATTGCTCACCTCC CAAGCTGGGCAGCTCCCTCGCCTGGGGGATTGCTCACCTCC < 41bp 0.739254573276119 0.476413422796659 0.92567515 0.91408813 prediction 0.478509146552238 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713739 chr3:30713741 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_69607 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:30713718-30713746
64251 chr3 30713742 30713742 1 + G A UCEC 30713739 + 30713719 30713759 41 CAAGCTGGGCAGCTCCCTCGCCCGGGGGATTGCTCACCTCC CAAGCTGGGCAGCTCCCTCGCCCAGGGGATTGCTCACCTCC < 41bp 0.739254573276119 0.488431186388986 0.92567515 0.20663232 prediction 0.478509146552238 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713739 chr3:30713742 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_69608 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:30713718-30713746
64251 chr22 50636413 50636413 1 + G A LGG 50636410 + 50636390 50636430 41 CGCGCGGCGCCTCGAGCTGCCTCGGGCCTCTGACGGTGACG CGCGCGGCGCCTCGAGCTGCCTCAGGCCTCTGACGGTGACG < 41bp 0.750174798118485 0.510920571582516 0.4223165 0.31068718 prediction 0.478508453071938 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636410 chr22:50636413 nonsynonymous SNV 0.041 2 24 hm5C_associated_SNPs_69609 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50636373-50636413
64251 chr4 6698763 6698763 1 + C T BLCA 6698761 + 6698741 6698781 41 AGTACTTTGAGAAGGCAGGACTCAAATGATGCCCTGGAGAT AGTACTTTGAGAAGGCAGGACTTAAATGATGCCCTGGAGAT < 41bp 0.796791030320865 0.557538002382591 0.9029677 0.17115116 prediction 0.478506055876547 Functional Loss - S100P ENSG00000163993 CDS Human protein_coding chr4:6698761 chr4:6698763 synonymous SNV . 0 23 hm5C_associated_SNPs_69610 0 0 6 DDX55 POSTAR2 ENCODE chr4:6698759-6698814
64251 chr7 64167568 64167568 1 + G T LUAD 64167566 + 64167546 64167586 41 TAAACAGGAGAAAATTCATACTGGAGGGAAACTCAACAAAT TAAACAGGAGAAAATTCATACTTGAGGGAAACTCAACAAAT < 41bp 0.739252149585814 0.457864982563717 0.32901755 0.18469146 prediction 0.478504299171628 Functional Loss - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64167566 chr7:64167568 stopgain 0.018 0 23 hm5C_associated_SNPs_69612 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:64167555-64167583
64251 chr2 216190732 216190732 1 + T C rs140829407 216190731 + 216190711 216190751 41 TGGAGTAACCTTACTGAGAGCTGCAGCCAAAAACCACGCTC TGGAGTAACCTTACTGAGAGCCGCAGCCAAAAACCACGCTC < 41bp 0.739251708157066 0.494622023243349 0.4110511 0.39395726 prediction 0.478503416314133 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216190731 chr2:216190732 synonymous SNV . 0 22 hm5C_associated_SNPs_69613 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:216190713-216190739
64251 chr17 28712021 28712021 1 + G T UCEC 28712018 + 28711998 28712038 41 TTTTCAAAGGTTTGTGCTTTCTGGAAATCTGCATGGTGGCT TTTTCAAAGGTTTGTGCTTTCTGTAAATCTGCATGGTGGCT < 41bp 0.739244826208877 0.367515816993461 0.19049835 0.20422485 prediction 0.478489652417753 Functional Loss - CPD ENSG00000108582 CDS Human protein_coding chr17:28712018 chr17:28712021 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_69615 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:28712007-28712041
64251 chr2 63206380 63206380 1 + G T UCEC 63206378 + 63206358 63206398 41 GAGAGCTCGTCAGCTAATAGCAGAAGCTCGATCTGGAGTGA GAGAGCTCGTCAGCTAATAGCATAAGCTCGATCTGGAGTGA < 41bp 0.739243491503657 0.411409399424422 0.88956296 0.317218 prediction 0.478486983007314 Functional Loss - EHBP1 ENSG00000115504 CDS Human protein_coding chr2:63206378 chr2:63206380 stopgain 1.000 1 23 hm5C_associated_SNPs_69616 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:63206380-63206399
64251 chr8 75924705 75924705 1 + G T LUAD 75924703 + 75924683 75924723 41 CTGGAAAGATCTGCAGAATCCTGGGCTGAAAGTTGCTTGTG CTGGAAAGATCTGCAGAATCCTTGGCTGAAAGTTGCTTGTG < 41bp 0.890170804979906 0.65093007782683 0.8463018 0.14397004 prediction 0.478481454306152 Functional Loss - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75924703 chr8:75924705 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_69617 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr8:75924680-75924707
64251 chr16 68894071 68894071 1 + G A UCEC 68894068 + 68894048 68894088 41 GTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCTGCCCTG GTAAACCCAACCCTAGGACTCCGAAAGTTGCTCCTGCCCTG < 41bp 0.752431465534286 0.513198018584868 0.87773156 0.35339606 prediction 0.478466893898836 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68894068 chr16:68894071 nonsynonymous SNV 0.963 2 24 hm5C_associated_SNPs_69622 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:68894045-68894083
64251 chr7 128477785 128477785 1 + G T UCEC 128477782 + 128477762 128477802 41 GGCGAGGTGCTGGTCTACATCGAGGACCCTGAAGGCCACAC GGCGAGGTGCTGGTCTACATCGATGACCCTGAAGGCCACAC < 41bp 0.739226611176975 0.354605828574674 0.9188014 0.87695014 prediction 0.47845322235395 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128477782 chr7:128477785 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_69625 0 0 1 DDX24 POSTAR2 ENCODE chr7:128477750-128477794
64251 chr7 98258506 98258506 1 + G A rs185580957 98258503 + 98258483 98258523 41 CTGAAGAACGCCCAGCCTGCCCAGACAAAGCCCCGCCTTCC CTGAAGAACGCCCAGCCTGCCCAAACAAAGCCCCGCCTTCC < 41bp 0.746128067328321 0.506911396361258 0.23592073 0.044180304 prediction 0.478433341934127 Functional Loss - NPTX2 ENSG00000106236 UTR3 Human protein_coding chr7:98258503 chr7:98258506 . . 0 24 hm5C_associated_SNPs_69628 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:98258506-98258529
64251 chr16 1825372 1825372 1 + G A rs74763106 1825369 + 1825349 1825389 41 GCCAGAGAGCCCGAAGGTGGCCGGTGCCGAGGTGGCCGTCA GCCAGAGAGCCCGAAGGTGGCCGATGCCGAGGTGGCCGTCA < 41bp 0.741161470472246 0.501946094269802 0.52042407 0.33564374 prediction 0.478430752404886 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825369 chr16:1825372 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_69629 0 0 9 EIF3B POSTAR2 GSE65004,GSM1585668 chr16:1825371-1825390
64251 chr4 134073826 134073826 1 + G A UCEC 134073823 + 134073803 134073843 41 TCTTAAGCCCTGCAGCCCTTCGCGGAGTACGGACACTGAGC TCTTAAGCCCTGCAGCCCTTCGCAGAGTACGGACACTGAGC < 41bp 0.751056165361799 0.511848190571704 0.3938426 0.115513355 prediction 0.478415949580189 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073823 chr4:134073826 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_69632 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:134073817-134073840
64251 chr20 372134 372134 1 + G A SKCM 372131 + 372111 372151 41 GAGGCTGCCGTGCTCTTCCGCCAGATGGCCACCGCCCTGGC GAGGCTGCCGTGCTCTTCCGCCAAATGGCCACCGCCCTGGC < 41bp 0.739205923263264 0.484155523424863 0.8693726 0.55812615 prediction 0.478411846526527 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:372131 chr20:372134 synonymous SNV . 0 24 hm5C_associated_SNPs_69634 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:372113-372135
64251 chr19 810798 810798 1 + G C LUAD 810794 + 810774 810814 41 ACCTCGGGGAGAACCACCACCTGCGGGTCTCCTTCTCCAAG ACCTCGGGGAGAACCACCACCTGCCGGTCTCCTTCTCCAAG < 41bp 0.739202160495266 0.451603913241792 0.05290237 0.022127062 prediction 0.478404320990532 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:810794 chr19:810798 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_69638 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:810788-810839
64251 chr2 136537757 136537757 1 + G T TGCT 136537754 + 136537734 136537774 41 TTTGTTTATTAATTTCTAGGCAGGAAGACCAACTGCATCCA TTTGTTTATTAATTTCTAGGCAGTAAGACCAACTGCATCCA < 41bp 0.739200227642334 0.361661365056015 0.46109802 0.10613069 prediction 0.478400455284667 Functional Loss - UBXN4 ENSG00000144224 CDS Human protein_coding chr2:136537754 chr2:136537757 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_69640 0 0 5 GRWD1 POSTAR2 ENCODE chr2:136537753-136537772
64251 chr8 124810476 124810476 1 + C T HNSC 124810474 + 124810454 124810494 41 GCCTGTCAGCAGCTGCACCCCTCAGGTAAAGACCTACTTGG GCCTGTCAGCAGCTGCACCCCTTAGGTAAAGACCTACTTGG < 41bp 0.739198480418508 0.4663476100456 0.16936019 0.06595659 prediction 0.478396960837017 Functional Loss - FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124810474 chr8:124810476 stopgain 0.980 1 23 hm5C_associated_SNPs_69641 0 0 2 PRPF8 POSTAR2 ENCODE chr8:124810439-124810495
64251 chr12 54394243 54394243 1 + C T COAD 54394241 + 54394221 54394261 41 GCCCCACCTCGGCGCCGACACGCGCTACATGCGGACTTGGC GCCCCACCTCGGCGCCGACACGTGCTACATGCGGACTTGGC < 41bp 0.73919737318458 0.498901433488313 0.25630736 0.24499741 prediction 0.478394746369161 Functional Loss - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394241 chr12:54394243 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_69642 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:54394240-54394260
64251 chr6 146865059 146865059 1 + G A PRAD 146865056 + 146865036 146865076 41 GCCTGGGGGCGGCCGCCGCCCCAGCGCCCGAGACCCGCGAG GCCTGGGGGCGGCCGCCGCCCCAACGCCCGAGACCCGCGAG < 41bp 0.759572282097449 0.520379157732005 0.5009512 0.31343454 prediction 0.478386248730888 Functional Loss - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146865056 chr6:146865059 nonsynonymous SNV 0.409 0 24 hm5C_associated_SNPs_69643 0 0 2 DDX3X POSTAR2 ENCODE chr6:146865018-146865083
64251 chr17 40125596 40125596 1 + T C UCEC 40125595 + 40125575 40125615 41 TGGAGTTAAGCGAGCAGCAACTGCAGTTGTGGCCGAGTGAT TGGAGTTAAGCGAGCAGCAACCGCAGTTGTGGCCGAGTGAT < 41bp 0.784659011774327 0.545479312837639 0.46485713 0.16827539 prediction 0.478359397873377 Functional Loss - CNP ENSG00000173786 CDS Human protein_coding chr17:40125595 chr17:40125596 nonsynonymous SNV 0.920 4 22 hm5C_associated_SNPs_69648 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:40125582-40125621
64251 chr10 89717672 89717672 1 + C T CESC 89717670 + 89717650 89717690 41 TTCCTCCAATTCAGGACCCACACGACGGGAAGACAAGTTCA TTCCTCCAATTCAGGACCCACATGACGGGAAGACAAGTTCA < 41bp 0.739179109090182 0.451106791008172 0.027666122 0.027178556 prediction 0.478358218180365 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717670 chr10:89717672 stopgain 0.999 1 23 hm5C_associated_SNPs_69649 10 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:89717622-89717684
64251 chr7 55086780 55086780 1 + A C rs712830 55086776 + 55086756 55086796 41 CCCCCCGCACGGTGTGAGCGCCCGACGCGGCCGAGGCGGCC CCCCCCGCACGGTGTGAGCGCCCGCCGCGGCCGAGGCGGCC < 41bp 0.739174529306527 0.417353119196746 0.24355641 0.21156687 prediction 0.478349058613055 Functional Loss - EGFR ENSG00000146648 UTR5 Human protein_coding chr7:55086776 chr7:55086780 . . 0 25 hm5C_associated_SNPs_69652 1 0 2 DDX3X POSTAR2 ENCODE chr7:55086737-55086838
64251 chr10 102738691 102738691 1 + G A SKCM 102738688 + 102738668 102738708 41 GACAAGGTGTACTACTTCTTCACGGAGCGTGCCACTGAGGA GACAAGGTGTACTACTTCTTCACAGAGCGTGCCACTGAGGA < 41bp 0.745077246732068 0.50590618472045 0.22150815 0.08588025 prediction 0.478342124023235 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102738688 chr10:102738691 synonymous SNV . 0 24 hm5C_associated_SNPs_69654 0 0 3 PPIG POSTAR2 ENCODE chr10:102738686-102738732
64251 chr19 14554341 14554341 1 + G A STAD 14554338 + 14554318 14554358 41 GCTCGGCCACCAACCTGAGCCGCGTGGCGGGCCTGGAGAAG GCTCGGCCACCAACCTGAGCCGCATGGCGGGCCTGGAGAAG < 41bp 0.739167397883774 0.494271869221555 0.40556017 0.23858052 prediction 0.478334795767548 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14554338 chr19:14554341 nonsynonymous SNV 0.106 2 24 hm5C_associated_SNPs_69656 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:14554330-14554355
64251 chr3 10108949 10108949 1 + T C COAD 10108948 + 10108928 10108968 41 GATGAAGGGGAAGGTGCTCACTCGGTTAAAGCACATTGTAG GATGAAGGGGAAGGTGCTCACCCGGTTAAAGCACATTGTAG < 41bp 0.753815686610113 0.51465575708743 0.11477932 0.17927074 prediction 0.478319859045365 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10108948 chr3:10108949 synonymous SNV . 0 22 hm5C_associated_SNPs_69660 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10108918-10109001
64251 chr16 20792416 20792416 1 + C T UCEC 20792414 + 20792394 20792434 41 AGGGAGCATGTGTATTCACACACCATTTACCCCGTTTTGAG AGGGAGCATGTGTATTCACACATCATTTACCCCGTTTTGAG < 41bp 0.844537369269535 0.605384932683627 0.07403457 0.15890431 prediction 0.478304873171816 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20792414 chr16:20792416 synonymous SNV . 0 23 hm5C_associated_SNPs_69664 0 0 5 FXR1 POSTAR2 ENCODE chr16:20792411-20792453
64251 chr17 18001642 18001642 1 + C T PRAD 18001640 + 18001620 18001660 41 GAGGCAGCGTCCTATGAGTTCACCACTCTGACGTGTATTCC GAGGCAGCGTCCTATGAGTTCATCACTCTGACGTGTATTCC < 41bp 0.739152267649162 0.451179312668205 0.08459434 0.1359415 prediction 0.478304535298325 Functional Loss - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18001640 chr17:18001642 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_69665 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18001634-18001675
64251 chr19 47879766 47879766 1 + G A rs137983157 47879763 + 47879743 47879783 41 CCTGCGTCTTCGCTGGCAGCCCCGAGGTGCTGCACGCACAG CCTGCGTCTTCGCTGGCAGCCCCAAGGTGCTGCACGCACAG < 41bp 0.752088638311111 0.512938541534341 0.176115 0.43487385 prediction 0.478300193553541 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47879763 chr19:47879766 nonsynonymous SNV 0.137 1 24 hm5C_associated_SNPs_69666 0 0 1 FXR2 POSTAR2 ENCODE chr19:47879701-47879799
64251 chr3 58487103 58487103 1 + T C LAML 58487102 + 58487082 58487122 41 CCACTAAGGTCCATTCCTTACTAGAAGGCATCTCAAATTAT CCACTAAGGTCCATTCCTTACCAGAAGGCATCTCAAATTAT < 41bp 0.772428637057545 0.533279788511747 0.03278035 0.073938996 prediction 0.478297697091598 Functional Loss - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58487102 chr3:58487103 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_69668 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087850 chr3:58487100-58487120
64251 chr19 50028513 50028513 1 + G A rs76650499 50028510 + 50028490 50028530 41 TGATCCATTGCCGGTGTGACCGCGGCCGCTCGTGCTGTAGC TGATCCATTGCCGGTGTGACCGCAGCCGCTCGTGCTGTAGC < 41bp 0.754211033270886 0.51506456710761 0.9034966 0.6439085 prediction 0.478292932326551 Functional Loss - FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50028510 chr19:50028513 . . 0 24 hm5C_associated_SNPs_69671 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50028507-50028536
64251 chr19 11145695 11145695 1 + G T LUSC 11145693 + 11145673 11145713 41 GTGGATCATCAAGGACGACGCGGAGGTGGAGCGGCTGACCT GTGGATCATCAAGGACGACGCGTAGGTGGAGCGGCTGACCT < 41bp 0.739144153113967 0.406949784583371 0.6742813 0.19735923 prediction 0.478288306227934 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145693 chr19:11145695 stopgain 0.731 1 23 hm5C_associated_SNPs_69672 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:11145680-11145700
64251 chr2 198400313 198400313 1 + T C UCEC 198400312 + 198400292 198400332 41 TGACAAAATTCTTGAACCACCTGAAGGCCAAGATGAAGGTG TGACAAAATTCTTGAACCACCCGAAGGCCAAGATGAAGGTG < 41bp 0.740725347654115 0.501587168372598 0.18050545 0.101962626 prediction 0.478276358563034 Functional Loss - HSPE1-MOB4;MOB4 ENSG00000115540;ENSG00000270757 CDS Human other chr2:198400312 chr2:198400313 synonymous SNV . 0 22 hm5C_associated_SNPs_69675 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:198400286-198400320
64251 chr1 29630421 29630421 1 + C T rs559788899 29630419 + 29630399 29630439 41 AGCAGCCTCCTGGGGGGCTCCCCGAGGCGTCCCTGTGGCCG AGCAGCCTCCTGGGGGGCTCCCTGAGGCGTCCCTGTGGCCG < 41bp 0.810642919861242 0.571508504655443 0.7954494 0.35276496 prediction 0.478268830411597 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29630419 chr1:29630421 nonsynonymous SNV 0.079 2 23 hm5C_associated_SNPs_69679 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29630415-29630451
64251 chr8 23147706 23147706 1 + A C rs192368333 23147705 + 23147685 23147725 41 TGTGCTGATGACTCAGGGAACAGAGGACCTAAAGGGCCCAG TGTGCTGATGACTCAGGGAACCGAGGACCTAAAGGGCCCAG < 41bp 0.780629321339412 0.541505521111224 0.7689743 0.7930088 prediction 0.478247600456376 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147705 chr8:23147706 synonymous SNV . 0 22 hm5C_associated_SNPs_69685 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23147678-23147731
64251 chr16 83998841 83998841 1 + G T DLBC 83998839 + 83998819 83998859 41 AGGACTCCAGCCCCCTCTTCCAGGTGAGCGGCTTCCTGACC AGGACTCCAGCCCCCTCTTCCATGTGAGCGGCTTCCTGACC < 41bp 0.739114323009511 0.386962210497218 0.9050518 0.7974685 prediction 0.478228646019021 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83998839 chr16:83998841 nonsynonymous SNV 0.963 0 23 hm5C_associated_SNPs_69688 0 0 1 RPS3 POSTAR2 ENCODE chr16:83998787-83998846
64251 chr1 228335240 228335240 1 + G A GBM 228335237 + 228335217 228335257 41 CTGTGCAGCCGCCTTCACTGCACGTGCTGGTGTGTGCTGGG CTGTGCAGCCGCCTTCACTGCACATGCTGGTGTGTGCTGGG < 41bp 0.739112778294725 0.494631324006105 0.19474438 0.097109914 prediction 0.47822555658945 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335237 chr1:228335240 nonsynonymous SNV 0.128 1 24 hm5C_associated_SNPs_69689 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228335206-228335245
64251 chr1 9787419 9787419 1 + G A rs115660954 9787416 + 9787396 9787436 41 CCAGCAAAGACTGTTCTCCTCCCGAGGGAACCTTCTTCCCA CCAGCAAAGACTGTTCTCCTCCCAAGGGAACCTTCTTCCCA < 41bp 0.742942625963432 0.50383885047566 0.16780207 0.21826896 prediction 0.478207550975545 Functional Loss - PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9787416 chr1:9787419 . . 0 24 hm5C_associated_SNPs_69693 0 0 1 METAP2 POSTAR2 ENCODE chr1:9787413-9787531
64251 chr3 14183263 14183263 1 + C T OV 14183261 + 14183241 14183281 41 CCTTGTGCCCATCCTTGTTGCTCGGACACGGGTGCCAGCCA CCTTGTGCCCATCCTTGTTGCTTGGACACGGGTGCCAGCCA < 41bp 0.804836273950241 0.565740465376753 0.17373863 0.10555157 prediction 0.478191617146977 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14183261 chr3:14183263 nonsynonymous SNV 0.949 2 23 hm5C_associated_SNPs_69701 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:14183260-14183278
64251 chr17 38510573 38510573 1 + G A UCEC 38510570 + 38510550 38510590 41 CCAGATCCTGCGGATCTGCACGCGGTACACGCCCGAGCAGG CCAGATCCTGCGGATCTGCACGCAGTACACGCCCGAGCAGG < 41bp 0.764983577484525 0.525897971605407 0.4879243 0.098810166 prediction 0.478171211758237 Functional Loss - RARA ENSG00000131759 CDS Human protein_coding chr17:38510570 chr17:38510573 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_69704 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:38510558-38510579
64251 chr22 50636357 50636357 1 + C T STAD 50636355 + 50636335 50636375 41 ACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTAC ACCGCACCATCGTCTCGGAGCGTGACGTCTACCTAACCTAC < 41bp 0.801124624180332 0.562044308616317 0.21373138 0.28005606 prediction 0.47816063112803 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636355 chr22:50636357 synonymous SNV . 0 23 hm5C_associated_SNPs_69709 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221663 chr22:50636340-50636360
64251 chr8 145066090 145066090 1 + G A LUSC 145066087 + 145066067 145066107 41 CAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTT CAGCTGTCGGTGACCCTGTCCACAGTGTCTGTGTTCACTTT < 41bp 0.739069919434269 0.494021995670427 0.21802375 0.04732302 prediction 0.478139838868538 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066087 chr8:145066090 synonymous SNV . 0 24 hm5C_associated_SNPs_69718 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145066048-145066090
64251 chr8 145066089 145066089 1 + C T UCEC 145066087 + 145066067 145066107 41 CAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTT CAGCTGTCGGTGACCCTGTCCATGGTGTCTGTGTTCACTTT < 41bp 0.739069919434269 0.467884310152227 0.21802375 0.10212439 prediction 0.478139838868538 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066087 chr8:145066089 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_69719 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145066048-145066090
64251 chr9 132996634 132996634 1 + G A rs116694639 132996631 + 132996611 132996651 41 GGCTGCGGCCCACATGTCTTCACGGAGGCTTCCAGCGGTGC GGCTGCGGCCCACATGTCTTCACAGAGGCTTCCAGCGGTGC < 41bp 0.761393104043368 0.52232723820041 0.8993435 0.73112524 prediction 0.478131731685917 Functional Loss - NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132996631 chr9:132996634 . . 0 24 hm5C_associated_SNPs_69721 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:132996592-132996635
64251 chr19 16790828 16790828 1 + C T COAD 16790826 + 16790806 16790846 41 CTGTCCCGGCGCCACCCCATCGCGTCCTGGCTGTGCGCCAT CTGTCCCGGCGCCACCCCATCGTGTCCTGGCTGTGCGCCAT < 41bp 0.808825278932111 0.569766235647918 0.5036386 0.4970013 prediction 0.478118086568386 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16790826 chr19:16790828 nonsynonymous SNV 0.089 3 23 hm5C_associated_SNPs_69722 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16790823-16790852
64251 chr3 152018067 152018067 1 + C T KIRC 152018065 + 152018045 152018085 41 GTTCCAGAGGGGGACTTGCTCACGGCCAGACACGGAATGTA GTTCCAGAGGGGGACTTGCTCATGGCCAGACACGGAATGTA < 41bp 0.789853222965046 0.550799235353575 0.62211555 0.71307147 prediction 0.478107975222943 Functional Loss - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152018065 chr3:152018067 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69727 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:152017948-152018133
64251 chr17 78328357 78328357 1 - C A LIHC 78328359 - 78328339 78328379 41 TACCTGAATGTGCCCGCCTCCTGGAGAGCGTCCTGGTTGCA TACCTGAATGTGCCCGCCTCCTTGAGAGCGTCCTGGTTGCA < 41bp 0.892236871407171 0.653187509129671 0.33396778 0.16677046 prediction 0.478098724555 Functional Loss - RNF213 ENSG00000173821 CDS Human protein_coding chr17:78328359 chr17:78328357 nonsynonymous SNV 0.729 4 23 hm5C_associated_SNPs_69728 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78328327-78328365
64251 chr16 3712889 3712889 1 + G A UCEC 3712886 + 3712866 3712906 41 CCCCGGGAAAGCCTCACCTTCACGTTGGTGACACGCGACCC CCCCGGGAAAGCCTCACCTTCACATTGGTGACACGCGACCC < 41bp 0.752575044212066 0.513527019887566 0.49832362 0.4201597 prediction 0.478096048648999 Functional Loss - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712886 chr16:3712889 synonymous SNV . 0 24 hm5C_associated_SNPs_69729 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3712874-3712897
64251 chr18 163367 163367 1 + C T SKCM 163365 + 163345 163385 41 AGAATTGAATACAGATGAACCTCCAATGGTATTCAAGGCTC AGAATTGAATACAGATGAACCTTCAATGGTATTCAAGGCTC < 41bp 0.853336439152212 0.614297602807698 0.95429647 0.37803173 prediction 0.478077672689027 Functional Loss - USP14 ENSG00000101557 CDS Human protein_coding chr18:163365 chr18:163367 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69731 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:163309-163367
64251 chr6 30617548 30617548 1 + G T UCEC 30617546 + 30617526 30617566 41 AGGAAAGGGGGAGGAGGGACCAGGACCTGAGTTGCATAGCG AGGAAAGGGGGAGGAGGGACCATGACCTGAGTTGCATAGCG < 41bp 0.842146305335418 0.60311049881169 0.8976053 0.45792302 prediction 0.478071613047456 Functional Loss - C6orf136 ENSG00000204564 CDS Human protein_coding chr6:30617546 chr6:30617548 stopgain 0.983 1 23 hm5C_associated_SNPs_69732 0 0 3 EFTUD2 POSTAR2 ENCODE chr6:30617526-30617561
64251 chr21 47412687 47412687 1 + G A rs151158105 47412684 + 47412664 47412704 41 TGGCCCTGGAGAGAGAGGACCACGGGGGACCCCAGGCACGC TGGCCCTGGAGAGAGAGGACCACAGGGGACCCCAGGCACGC < 41bp 0.767632389745295 0.528604929438698 0.32921544 0.11254758 prediction 0.478054920613193 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47412684 chr21:47412687 nonsynonymous SNV 0.832 1 24 hm5C_associated_SNPs_69737 2 0 2 PPIG POSTAR2 ENCODE chr21:47412673-47412720
64251 chr19 37619640 37619640 1 + G T HNSC 37619638 + 37619618 37619658 41 TCAACATCAGCGAATTCACACTGGAGAAAAACCCTATGAAT TCAACATCAGCGAATTCACACTTGAGAAAAACCCTATGAAT < 41bp 0.88224010403422 0.643230469835096 0.23734415 0.055079848 prediction 0.478019268398248 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37619638 chr19:37619640 stopgain 0.306 0 23 hm5C_associated_SNPs_69743 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37619610-37619645
64251 chr1 54417905 54417905 1 + G T BLCA 54417902 + 54417882 54417922 41 TCATTTCATCTTCACATACACCCGAGAGGGGAATCTTCGGT TCATTTCATCTTCACATACACCCTAGAGGGGAATCTTCGGT < 41bp 0.739008817530423 0.348392206712636 0.031933993 0.013668746 prediction 0.478017635060846 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54417902 chr1:54417905 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_69745 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:54417880-54417905
64251 chr1 1420434 1420434 1 + A C rs150536426 1420433 + 1420413 1420453 41 GCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCG GCTGGCTGTCGGGGTCTACTCCGCCAAGAATGCGACAGCCG < 41bp 0.771418428090409 0.532409740568223 0.8517492 0.8563216 prediction 0.478017375044372 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1420433 chr1:1420434 synonymous SNV . 0 22 hm5C_associated_SNPs_69746 0 0 4 BUD13 POSTAR2 ENCODE chr1:1420394-1420493
64251 chr11 66258843 66258843 1 + G T LUAD 66258840 + 66258820 66258860 41 TCCAGAAGGTGGTGGAGCAGCTGGAGAAAGCCAAGGTTGGA TCCAGAAGGTGGTGGAGCAGCTGTAGAAAGCCAAGGTTGGA < 41bp 0.918155292260718 0.679165168050439 0.48674786 0.31707782 prediction 0.477980248420558 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66258840 chr11:66258843 stopgain 1.000 1 24 hm5C_associated_SNPs_69753 0 0 1 BUD13 POSTAR2 ENCODE chr11:66258803-66258855
64251 chr7 2418396 2418396 1 + T C LIHC 2418395 + 2418375 2418415 41 CGTTTGAGTCAGTCCAAAGCCTCAAAGGTGAGCCTCATTCC CGTTTGAGTCAGTCCAAAGCCCCAAAGGTGAGCCTCATTCC < 41bp 0.738981040310065 0.470294536196307 0.12987429 0.07568279 prediction 0.47796208062013 Functional Loss - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2418395 chr7:2418396 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_69757 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2418324-2418399
64251 chr19 49464862 49464862 1 + C T ESCA 49464860 + 49464840 49464880 41 TTTGTGGCGGGAGTGCTCACCGCCTCACTCACCATCTGGAA TTTGTGGCGGGAGTGCTCACCGTCTCACTCACCATCTGGAA < 41bp 0.738979747121952 0.493181884686916 0.1488955 0.06815797 prediction 0.477959494243904 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464860 chr19:49464862 nonsynonymous SNV 0.977 0 23 hm5C_associated_SNPs_69758 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr5 138163381 138163381 1 + G A BLCA 138163378 + 138163358 138163398 41 ATGCTGTCCGCCAGGCCCTGCAGGACCTGCTTTCGGAGTAC ATGCTGTCCGCCAGGCCCTGCAGAACCTGCTTTCGGAGTAC < 41bp 0.763972369056974 0.52499961981638 0.38849044 0.14752105 prediction 0.477945498481189 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138163378 chr5:138163381 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_69763 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:138163355-138163396
64251 chr6 30615027 30615027 1 + G T LUSC 30615024 + 30615004 30615044 41 AGATCATGTACCAGCCCAGCCGGGGTGCGGCCCGGCGTCTC AGATCATGTACCAGCCCAGCCGGTGTGCGGCCCGGCGTCTC < 41bp 0.877945005493638 0.638986653278514 0.92210895 0.60219043 prediction 0.477916704430248 Functional Loss - C6orf136 ENSG00000204564 CDS Human protein_coding chr6:30615024 chr6:30615027 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_69768 0 0 1 DDX3X POSTAR2 ENCODE chr6:30614965-30615056
64251 chr1 226026400 226026400 1 + C T BLCA 226026398 + 226026378 226026418 41 GTGAAGCCCCCCCAGCTGCCCGCAGGCCATACCCCGAAGCC GTGAAGCCCCCCCAGCTGCCCGTAGGCCATACCCCGAAGCC < 41bp 0.738957319469236 0.478867886998065 0.0991849 0.11336592 prediction 0.477914638938471 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026398 chr1:226026400 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_69769 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:226026400-226026401
64251 chr14 94582821 94582821 1 + C T rs2227974 94582819 + 94582799 94582839 41 TTGACCAAGTTCATCCTGGGCTCCATTGGGTCTGCCATTGC TTGACCAAGTTCATCCTGGGCTTCATTGGGTCTGCCATTGC < 41bp 0.815205245369582 0.57625230748813 0.89872944 0.14454493 prediction 0.477905875762905 Functional Loss - IFI27 ENSG00000165949 CDS Human protein_coding chr14:94582819 chr14:94582821 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_69771 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:94582805-94582829
64251 chr8 145134986 145134986 1 + C T LUSC 145134984 + 145134964 145135004 41 GTGAGATGGGCCTGCAGCTCCGCCAGACTTTCGAAGCAGCC GTGAGATGGGCCTGCAGCTCCGTCAGACTTTCGAAGCAGCC < 41bp 0.825709103095571 0.586757359983146 0.3661878 0.1516532 prediction 0.477903486224849 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145134984 chr8:145134986 synonymous SNV . 0 23 hm5C_associated_SNPs_69772 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:145134955-145135005
64251 chr1 248059112 248059112 1 + C T SKCM 248059110 + 248059090 248059130 41 TTCCTGGACCTCAGTTTCACCACCAGCTCCATCCCCCAGCT TTCCTGGACCTCAGTTTCACCATCAGCTCCATCCCCCAGCT < 41bp 0.794812473497514 0.555866223950167 0.104325324 0.040143102 prediction 0.477892499094694 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059110 chr1:248059112 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_69774 0 0 1 METAP2 POSTAR2 ENCODE chr1:248059067-248059146
64251 chr7 5036568 5036568 1 + G A rs186390122 5036565 + 5036545 5036585 41 CAACGTGGCTGAGGGCCACACCCGAGGCCGGGCCACCATCC CAACGTGGCTGAGGGCCACACCCAAGGCCGGGCCACCATCC < 41bp 0.755235588079532 0.516290591438742 0.7250946 0.23707592 prediction 0.477889993281578 Functional Loss - RNF216P1 ENSG00000196204 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:5036565 chr7:5036568 . . 0 24 hm5C_associated_SNPs_69775 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5036545-5036575
64251 chr9 37503059 37503059 1 + G C COAD 37503055 + 37503035 37503075 41 CTTAGGATGATGGAGATAGCCAAAGCCATGAGGCTGAAGAT CTTAGGATGATGGAGATAGCCAAACCCATGAGGCTGAAGAT < 41bp 0.738940851242247 0.454311680936344 0.66262025 0.36104327 prediction 0.477881702484494 Functional Loss - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37503055 chr9:37503059 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_69778 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:37503058-37503059
64251 chr17 38609323 38609323 1 + A C UCEC 38609319 + 38609299 38609339 41 TGCCTGCAGAAGCACTTCGCCAAAATTCGAGACCGGAGCAC TGCCTGCAGAAGCACTTCGCCAAACTTCGAGACCGGAGCAC < 41bp 0.738940490807235 0.319375588954471 0.14934805 0.30189645 prediction 0.477880981614471 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38609319 chr17:38609323 nonsynonymous SNV 0.966 0 25 hm5C_associated_SNPs_69779 0 0 2 LIN28A POSTAR2 GSE39873,GSM980593 chr17:38609320-38609340
64251 chr14 76633013 76633013 1 + A C HNSC 76633012 + 76632992 76633032 41 TACTCTTTTTACAGTGAAACCAGCAGTGTGTGTAGCAGCAG TACTCTTTTTACAGTGAAACCCGCAGTGTGTGTAGCAGCAG < 41bp 0.738937115531237 0.484456409462306 0.25513697 0.12977651 prediction 0.477874231062474 Functional Loss - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76633012 chr14:76633013 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_69781 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr14:76633007-76633034
64251 chr5 154330430 154330430 1 + C T CESC 154330428 + 154330408 154330448 41 AAGTGCTTCTCTTGACATTTCTCGAAAATGGGAGAAGAAGA AAGTGCTTCTCTTGACATTTCTTGAAAATGGGAGAAGAAGA < 41bp 0.738936332170748 0.441341658131062 0.84644115 0.25167343 prediction 0.477872664341495 Functional Loss - MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330428 chr5:154330430 stopgain 0.997 0 23 hm5C_associated_SNPs_69783 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:154330400-154330440
64251 chr22 41919908 41919908 1 + C T LUAD 41919906 + 41919886 41919926 41 AACTTCACGGGCCGCAACGACGCAAACCCCGAGACCCATGC AACTTCACGGGCCGCAACGACGTAAACCCCGAGACCCATGC < 41bp 0.738924442276299 0.454479490072315 0.059293598 0.077783346 prediction 0.477848884552598 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41919906 chr22:41919908 nonsynonymous SNV 0.528 2 23 hm5C_associated_SNPs_69785 0 0 1 FXR2 POSTAR2 ENCODE chr22:41919895-41919945
64251 chr20 44049006 44049006 1 + C T LUAD 44049004 + 44048984 44049024 41 TCCGGATGTTCTCCCGAACCCTCACGGAGCCCTGCCCCCTG TCCGGATGTTCTCCCGAACCCTTACGGAGCCCTGCCCCCTG < 41bp 0.770118287344228 0.531194815079539 0.10062903 0.10881066 prediction 0.477846944529379 Functional Loss - PIGT ENSG00000124155 CDS Human protein_coding chr20:44049004 chr20:44049006 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_69787 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:44048991-44049025
64251 chr11 838021 838021 1 + G T LUAD 838019 + 837999 838039 41 GCTGTGGGGATCGGCATTGCCTGTGTGCAGGTGAGGGCACA GCTGTGGGGATCGGCATTGCCTTTGTGCAGGTGAGGGCACA < 41bp 0.738923129651231 0.396152324962151 0.2728352 0.16556218 prediction 0.477846259302461 Functional Loss - CD151 ENSG00000177697 CDS Human protein_coding chr11:838019 chr11:838021 nonsynonymous SNV 0.940 1 23 hm5C_associated_SNPs_69788 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:837972-838021
64251 chr19 17837658 17837658 1 + G A UCEC 17837655 + 17837635 17837675 41 GCTCGAAGAGAGAGGGCCTCCTGGCCACCCACCCTAGACCT GCTCGAAGAGAGAGGGCCTCCTGACCACCCACCCTAGACCT < 41bp 0.738919331651148 0.493626266504772 0.42715502 0.15492526 prediction 0.477838663302296 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837655 chr19:17837658 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_69791 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17837648-17837681
64251 chr3 57994483 57994483 1 + C T UCEC 57994481 + 57994461 57994501 41 TCAGCCAGAAGCGCATGTACCGCAAGTACCATCAGCGGCCC TCAGCCAGAAGCGCATGTACCGTAAGTACCATCAGCGGCCC < 41bp 0.74482850875633 0.505936570646146 0.2345967 0.23537543 prediction 0.477783876220369 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:57994481 chr3:57994483 synonymous SNV . 0 23 hm5C_associated_SNPs_69804 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr3:57994483-57994484
64251 chr20 62660744 62660744 1 + G T ESCA 62660742 + 62660722 62660762 41 AATTATAGGTATCCTGTGGTCTGAGGCCATCTTCCTCGAGG AATTATAGGTATCCTGTGGTCTTAGGCCATCTTCCTCGAGG < 41bp 0.738886469856624 0.390314110231932 0.38524073 0.10497016 prediction 0.477772939713247 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62660742 chr20:62660744 stopgain 1.000 1 23 hm5C_associated_SNPs_69806 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr20:62660740-62660760
64251 chr6 345906 345906 1 + G A STAD 345903 + 345883 345923 41 TCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGTA TCATTCACGAGTGCCGGCTCCGCAGTGAGAGCTGCCTTGTA < 41bp 0.751910412282281 0.51302525463321 0.3498947 0.10642403 prediction 0.477770315298142 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:345903 chr6:345906 nonsynonymous SNV 0.601 4 24 hm5C_associated_SNPs_69807 0 0 5 BUD13 POSTAR2 ENCODE chr6:345878-345971
64251 chr17 61685207 61685207 1 + G T LUSC 61685204 + 61685184 61685224 41 TGCACCAAGTGAGGAAGAAGCTGGACTCCCTGGGCCTGTGT TGCACCAAGTGAGGAAGAAGCTGTACTCCCTGGGCCTGTGT < 41bp 0.918078760915293 0.679204172838425 0.90818787 0.5553682 prediction 0.477749176153737 Functional Loss - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61685204 chr17:61685207 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_69814 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:61685166-61685210
64251 chr1 201969078 201969078 1 + G C LUAD 201969074 + 201969054 201969094 41 CTGCAACGGGGCGGGCTCTGCTGCGTCAGCACATGGACATC CTGCAACGGGGCGGGCTCTGCTGCCTCAGCACATGGACATC < 41bp 0.848203860932374 0.609333583506242 0.47483402 0.36113352 prediction 0.477740554852264 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201969074 chr1:201969078 nonsynonymous SNV 0.708 1 25 hm5C_associated_SNPs_69815 0 0 1 DDX6 POSTAR2 ENCODE chr1:201969034-201969079
64251 chr19 50173480 50173480 1 + C T SKCM 50173478 + 50173458 50173498 41 TCTTCCACCCTACAGCTGGCCTCGGACCCCGCCCTGCGCAG TCTTCCACCCTACAGCTGGCCTTGGACCCCGCCCTGCGCAG < 41bp 0.744120637104535 0.505250849726487 0.31087294 0.17807189 prediction 0.477739574756096 Functional Loss - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50173478 chr19:50173480 nonsynonymous SNV 0.661 0 23 hm5C_associated_SNPs_69816 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:50173480-50173481
64251 chr1 1560526 1560526 1 + G T CESC 1560524 + 1560504 1560544 41 CCTCAAGTGTGTGGGCGAGGCAGCGGGCGGCTTCTACTACA CCTCAAGTGTGTGGGCGAGGCATCGGGCGGCTTCTACTACA < 41bp 0.738854873011045 0.403094629042987 0.5057029 0.3349878 prediction 0.47770974602209 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1560524 chr1:1560526 nonsynonymous SNV 0.136 0 23 hm5C_associated_SNPs_69824 0 0 6 BUD13 POSTAR2 ENCODE chr1:1560512-1560566
64251 chr20 33507309 33507309 1 + C T rs147058493 33507307 + 33507287 33507327 41 AGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAG AGGCAGGGGATGAGTGTGAGCCTGAGTGGTGTGATGCCGAG < 41bp 0.836039039423514 0.597184274037281 0.26060814 0.25189987 prediction 0.477709530772465 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33507307 chr20:33507309 synonymous SNV . 0 23 hm5C_associated_SNPs_69825 0 0 4 DDX24 POSTAR2 ENCODE chr20:33507308-33507376
64251 chr9 37428531 37428531 1 + C T ACC 37428529 + 37428509 37428549 41 TGGCTGTGTGGCTATGGACTCACGCAGAGCACTGTCGGCAT TGGCTGTGTGGCTATGGACTCATGCAGAGCACTGTCGGCAT < 41bp 0.763030701793945 0.524177719078514 0.14805707 0.2482127 prediction 0.477705965430862 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37428529 chr9:37428531 nonsynonymous SNV 0.947 2 23 hm5C_associated_SNPs_69826 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:37428502-37428542
64251 chr10 75525577 75525577 1 + G T CESC 75525575 + 75525555 75525595 41 CAGTTCCCCCCCAGTATTTTCAGCACCTGGATCATACCGGC CAGTTCCCCCCCAGTATTTTCATCACCTGGATCATACCGGC < 41bp 0.738850858492609 0.388491840862444 0.24564192 0.058589727 prediction 0.477701716985217 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75525575 chr10:75525577 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69828 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:75525568-75525609
64251 chr15 80455390 80455390 1 + G T rs182684650 80455387 + 80455367 80455407 41 CCAGTGCCATCAGTCACACACAGGAGCTGGGTTAGGGACGG CCAGTGCCATCAGTCACACACAGTAGCTGGGTTAGGGACGG < 41bp 0.738838870362369 0.356082884649099 0.90794015 0.4141753 prediction 0.477677740724737 Functional Loss - FAH ENSG00000103876 intronic Human protein_coding chr15:80455387 chr15:80455390 . . 0 24 hm5C_associated_SNPs_69833 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:80455383-80455411
64251 chr14 52182105 52182105 1 + G T KIRP 52182102 + 52182082 52182122 41 GCCCGGAAGCTCATATACTACACGGGGTGCCCCATGCGCTC GCCCGGAAGCTCATATACTACACTGGGTGCCCCATGCGCTC < 41bp 0.777161826621364 0.538325179260422 0.24268875 0.055971712 prediction 0.477673294721883 Functional Loss - FRMD6 ENSG00000139926 CDS Human protein_coding chr14:52182102 chr14:52182105 synonymous SNV . 0 24 hm5C_associated_SNPs_69834 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:52182082-52182105
64251 chr11 13736093 13736093 1 + C T COAD 13736091 + 13736071 13736111 41 CCACTTTCAAGAGGAATCCTCTCGAACAGGCCTTCAGACGG CCACTTTCAAGAGGAATCCTCTTGAACAGGCCTTCAGACGG < 41bp 0.850431703825057 0.611596224309746 0.9401587 0.23998705 prediction 0.477670959030623 Functional Loss - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13736091 chr11:13736093 synonymous SNV . 0 23 hm5C_associated_SNPs_69835 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:13736061-13736097
64251 chr14 65205488 65205488 1 + C T LUAD 65205486 + 65205466 65205506 41 GGGCGCAGGGAGTCTGAAAGCTCCAGGAGCAGCAGAAGGCC GGGCGCAGGGAGTCTGAAAGCTTCAGGAGCAGCAGAAGGCC < 41bp 0.838387706530588 0.59955352042199 0.7894907 0.14305794 prediction 0.477668372217196 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65205486 chr14:65205488 nonsynonymous SNV 0.781 1 23 hm5C_associated_SNPs_69836 0 0 1 BUD13 POSTAR2 ENCODE chr14:65205418-65205497
64251 chr17 4860152 4860152 1 + G A UCEC 4860149 + 4860129 4860169 41 AAGACTGGCGCCCCCTGCCGCTCGGAGCGTCTGGCCAAATA AAGACTGGCGCCCCCTGCCGCTCAGAGCGTCTGGCCAAATA < 41bp 0.743345802908011 0.504513769059317 0.22438341 0.13150105 prediction 0.477664067697388 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4860149 chr17:4860152 synonymous SNV . 0 24 hm5C_associated_SNPs_69837 0 0 4 PPIG POSTAR2 ENCODE chr17:4860126-4860184
64251 chr11 8111755 8111755 1 + G T LUAD 8111753 + 8111733 8111773 41 CTGGTGGAGTCCTACCTCAGCAGCAGTGGCAGCACCAGCTA CTGGTGGAGTCCTACCTCAGCATCAGTGGCAGCACCAGCTA < 41bp 0.897856700241729 0.659024932102797 0.34096426 0.20041999 prediction 0.477663536277865 Functional Loss - TUB ENSG00000166402 CDS Human protein_coding chr11:8111753 chr11:8111755 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_69838 0 0 2 BUD13 POSTAR2 ENCODE chr11:8111644-8111774
64251 chr10 60562911 60562911 1 + G A SKCM 60562908 + 60562888 60562928 41 TTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAG TTTGGCTGACAAGAAGGCTCCAGAGAGTGAGCGCGCTGCAG < 41bp 0.738830211231878 0.497168773879107 0.8972714 0.7351251 prediction 0.477660422463756 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60562908 chr10:60562911 nonsynonymous SNV 0.983 4 24 hm5C_associated_SNPs_69839 0 0 6 HNRNPD POSTAR2 GSE52971,GSM1279664 chr10:60562880-60562920
64251 chr17 8090308 8090308 1 + G C rs3027265 8090304 + 8090284 8090324 41 TCAGTTTTGTAGCATCAAAACTAGGATTTCTCTTGTTACCC TCAGTTTTGTAGCATCAAAACTAGCATTTCTCTTGTTACCC < 41bp 0.798636465612008 0.559806445573227 0.06895724 0.07819906 prediction 0.477660040077562 Functional Loss - MIR4521 ENSG00000266638 upstream Human other chr17:8090304 chr17:8090308 . . 0 25 hm5C_associated_SNPs_69840 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:8090234-8090320
64251 chr11 66261065 66261065 1 + C T UCEC 66261063 + 66261043 66261083 41 TCGATGTGCAGGTGGGCCTGCACGAGCTGCTGGGCCATGGC TCGATGTGCAGGTGGGCCTGCATGAGCTGCTGGGCCATGGC < 41bp 0.829918857898688 0.59108936750397 0.42943716 0.38092583 prediction 0.477658980789435 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66261063 chr11:66261065 synonymous SNV . 0 23 hm5C_associated_SNPs_69841 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:66261045-66261066
64251 chr15 41793881 41793881 1 + C T COAD 41793879 + 41793859 41793899 41 GGGCTGATCCTGAAGCGCTGCTCGGAGCCGGAGCGCTACTG GGGCTGATCCTGAAGCGCTGCTTGGAGCCGGAGCGCTACTG < 41bp 0.73882779853129 0.476840907106163 0.84475845 0.8124547 prediction 0.477655597062579 Functional Loss - ITPKA ENSG00000137825 CDS Human protein_coding chr15:41793879 chr15:41793881 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69845 0 0 4 DDX3X POSTAR2 ENCODE chr15:41793841-41793883
64251 chr4 71863888 71863888 1 + G T UCEC 71863885 + 71863865 71863905 41 GGTGCAATGTTCAAAGTACTCAAGATGAATTTGAGGTATGA GGTGCAATGTTCAAAGTACTCAATATGAATTTGAGGTATGA < 41bp 0.784853207800695 0.546028081355554 0.32112494 0.08903274 prediction 0.47765025289028 Functional Loss - DCK ENSG00000156136 CDS Human protein_coding chr4:71863885 chr4:71863888 nonsynonymous SNV 0.912 3 24 hm5C_associated_SNPs_69847 0 0 3 GRWD1 POSTAR2 ENCODE chr4:71863819-71863899
64251 chr1 233802686 233802686 1 + G T STAD 233802683 + 233802663 233802703 41 TGGCCTGGGGGATTATGTGCCTGGGGAAGGCTACAATCAAA TGGCCTGGGGGATTATGTGCCTGTGGAAGGCTACAATCAAA < 41bp 0.738819952652738 0.365150452247277 0.55358464 0.24564394 prediction 0.477639905305475 Functional Loss - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802683 chr1:233802686 nonsynonymous SNV 0.797 3 24 hm5C_associated_SNPs_69850 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:233802685-233802700
64251 chr2 136409574 136409574 1 + A C rs2305165 136409573 + 136409553 136409593 41 GCCAGCCTGTGCTCCAGCAGCAGGGATATATTCAGCAGCCA GCCAGCCTGTGCTCCAGCAGCCGGGATATATTCAGCAGCCA < 41bp 0.738810280025134 0.484005722022943 0.77565145 0.6650489 prediction 0.477620560050269 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136409573 chr2:136409574 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_69854 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:136409563-136409595
64251 chr12 120114397 120114397 1 + C T UCEC 120114395 + 120114375 120114415 41 AGGAGCCCTACGTCTGCAAACCCGAAGAGCGCTTTCGGGCA AGGAGCCCTACGTCTGCAAACCTGAAGAGCGCTTTCGGGCA < 41bp 0.839998784450033 0.601191295900145 0.11988297 0.094929755 prediction 0.477614977099777 Functional Loss - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120114395 chr12:120114397 synonymous SNV . 0 23 hm5C_associated_SNPs_69856 0 0 1 RPS3 POSTAR2 ENCODE chr12:120114343-120114399
64251 chr7 92020615 92020615 1 + C T UCEC 92020613 + 92020593 92020633 41 AGAATTCCTGGCATCTGTGGCTCGGGGAGTAGCTCCTGCAG AGAATTCCTGGCATCTGTGGCTTGGGGAGTAGCTCCTGCAG < 41bp 0.821334681210124 0.582543604291603 0.4482479 0.576711 prediction 0.477582153837043 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92020613 chr7:92020615 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_69861 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr7:92020595-92020621
64251 chr6 1612173 1612173 1 + C T PRAD 1612171 + 1612151 1612191 41 GCGGCGGCGGCCGCAGGCTACCCGGGCCAGCAGCAGAACTT GCGGCGGCGGCCGCAGGCTACCTGGGCCAGCAGCAGAACTT < 41bp 0.750518351581535 0.511727328247997 0.85774744 0.5792299 prediction 0.477582046667076 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1612171 chr6:1612173 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_69862 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378375 chr6:1612160-1612180
64251 chr1 204379802 204379802 1 - C A LUSC 204379805 - 204379785 204379825 41 CAGAACAGTGATGGAAATAGCGAGGTAGTCGGCTTCCAGAC CAGAACAGTGATGGAAATAGCGATGTAGTCGGCTTCCAGAC < 41bp 0.916003287689281 0.677219732950742 0.93815666 0.85533327 prediction 0.477567109477079 Functional Loss - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204379805 chr1:204379802 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_69865 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:204379715-204379809
64251 chrX 56592023 56592023 1 + C T THCA 56592021 + 56592001 56592041 41 GGCCCTGGCTGGAGCAAATGCTCCACAGCTGCCGAATCCAG GGCCCTGGCTGGAGCAAATGCTTCACAGCTGCCGAATCCAG < 41bp 0.738781069089658 0.458872464016781 0.88648033 0.14651 prediction 0.477562138179317 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592021 chrX:56592023 nonsynonymous SNV 0.942 0 23 hm5C_associated_SNPs_69866 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:56592018-56592049
64251 chr19 4491801 4491801 1 + G A UCEC 4491798 + 4491778 4491818 41 GAAAGCAGCGGTCCGGGCGCCACGGAGGGGCCCTCTGGGGG GAAAGCAGCGGTCCGGGCGCCACAGAGGGGCCCTCTGGGGG < 41bp 0.759742363320729 0.520967171533622 0.69960207 0.72620606 prediction 0.477550383574215 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4491798 chr19:4491801 nonsynonymous SNV 0.500 3 24 hm5C_associated_SNPs_69867 0 0 9 EFTUD2 POSTAR2 ENCODE chr19:4491775-4491845
64251 chr1 44456112 44456112 1 + C T HNSC 44456110 + 44456090 44456130 41 GCGGCCTCCGTCGTGGCCCCCTCGGGGCTGACACTAATGGA GCGGCCTCCGTCGTGGCCCCCTTGGGGCTGACACTAATGGA < 41bp 0.738771595712717 0.48135290454082 0.24409449 0.116665274 prediction 0.477543191425434 Functional Loss - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44456110 chr1:44456112 nonsynonymous SNV 0.831 1 23 hm5C_associated_SNPs_69871 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:44456077-44456119
64251 chr9 124519371 124519371 1 + G A STAD 124519368 + 124519348 124519388 41 CCAGCAGTGCGGTGGAGGCGCTGGACCTCAGCATGGAGGAA CCAGCAGTGCGGTGGAGGCGCTGAACCTCAGCATGGAGGAA < 41bp 0.738769500299319 0.4904558283969 0.40835756 0.49185082 prediction 0.477539000598637 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124519368 chr9:124519371 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_69872 0 0 1 EIF3H POSTAR2 ENCODE chr9:124519341-124519425
64251 chr5 10258573 10258573 1 + G T LUAD 10258570 + 10258550 10258590 41 AACCAAAAACAAAGCATAAGCTGGATGTGACCTCTGTCGAA AACCAAAAACAAAGCATAAGCTGTATGTGACCTCTGTCGAA < 41bp 0.916115980265572 0.677348977602289 0.34347257 0.093583375 prediction 0.477534005326564 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10258570 chr5:10258573 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_69874 0 0 32 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10258517-10258647
64251 chr19 10394764 10394764 1 + G A rs35956512 10394761 + 10394741 10394781 41 CCCCGGGTCCTAGAGGTGGACACGCAGGGGACCGTGGTCTG CCCCGGGTCCTAGAGGTGGACACACAGGGGACCGTGGTCTG < 41bp 0.751807677191321 0.513040843737735 0.102391124 0.066435546 prediction 0.477533666907172 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394761 chr19:10394764 synonymous SNV . 0 24 hm5C_associated_SNPs_69875 0 0 4 NOL12 POSTAR2 ENCODE chr19:10394735-10394786
64251 chr1 100741239 100741239 1 + G T UCEC 100741236 + 100741216 100741256 41 ATGTTAACATCCAGCCTGTTCAAGAACCTAAAGACCAAGCA ATGTTAACATCCAGCCTGTTCAATAACCTAAAGACCAAGCA < 41bp 0.738765441328077 0.359361342552105 0.059901297 0.054257482 prediction 0.477530882656154 Functional Loss - RTCA ENSG00000137996 CDS Human protein_coding chr1:100741236 chr1:100741239 stopgain 0.904 1 24 hm5C_associated_SNPs_69877 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:100741190-100741250
64251 chr1 1420477 1420477 1 + C T LUAD 1420475 + 1420455 1420495 41 CACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCC CACTGGCCGCTTCATCGAGGCTTGGCTGGGGAAGCCGTCCC < 41bp 0.800964402116037 0.56220082172617 0.30501395 0.32465452 prediction 0.477527160779732 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1420475 chr1:1420477 nonsynonymous SNV 0.000 5 23 hm5C_associated_SNPs_69878 0 0 5 BUD13 POSTAR2 ENCODE chr1:1420394-1420493
64251 chr12 123463779 123463779 1 + C T COAD 123463777 + 123463757 123463797 41 GGCTCCGAGCCTCTGCTGTGCGCAACAGCCTCTGTCCCATG GGCTCCGAGCCTCTGCTGTGCGTAACAGCCTCTGTCCCATG < 41bp 0.738762454190445 0.497214708463506 0.1739521 0.11310464 prediction 0.477524908380889 Functional Loss - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463777 chr12:123463779 synonymous SNV . 0 23 hm5C_associated_SNPs_69879 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:123463769-123463803
64251 chr1 226026435 226026435 1 + G A LGG 226026432 + 226026412 226026452 41 CGAAGCCCTTGCTGATGGTGCACGGCTGGCCCGGCTCTTTC CGAAGCCCTTGCTGATGGTGCACAGCTGGCCCGGCTCTTTC < 41bp 0.775372769093572 0.536618988559685 0.24335614 0.08030224 prediction 0.477507561067774 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026432 chr1:226026435 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_69881 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:226026411-226026445
64251 chr7 128850354 128850354 1 + G A BLCA 128850351 + 128850331 128850371 41 ATGAGCACCTGGGTCTGGACCAAGGCCACGCTGCTCATCTG ATGAGCACCTGGGTCTGGACCAAAGCCACGCTGCTCATCTG < 41bp 0.764235363740515 0.525482951441123 0.8855206 0.8102366 prediction 0.477504824598785 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128850351 chr7:128850354 synonymous SNV . 0 24 hm5C_associated_SNPs_69883 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:128850338-128850376
64251 chr14 21167850 21167850 1 + C T READ 21167848 + 21167828 21167868 41 CATGAGGGTGTAGTGAAGGTCACAGATTGCAGGGACACAGG CATGAGGGTGTAGTGAAGGTCATAGATTGCAGGGACACAGG < 41bp 0.738750680609416 0.48254431571283 0.1435934 0.17442277 prediction 0.477501361218831 Functional Loss - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167848 chr14:21167850 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_69885 0 0 3 RPS3 POSTAR2 ENCODE chr14:21167843-21167863
64251 chr11 60561549 60561549 1 + G A rs150419681 60561546 + 60561526 60561566 41 CTGGAGAGCCCATTTGAGTCCCCGATCTGGAGAATGTACCC CTGGAGAGCCCATTTGAGTCCCCAATCTGGAGAATGTACCC < 41bp 0.738749984532388 0.497400043951923 0.046409458 0.14387688 prediction 0.477499969064777 Functional Loss - MS4A10 ENSG00000172689 CDS Human protein_coding chr11:60561546 chr11:60561549 synonymous SNV . 0 24 hm5C_associated_SNPs_69886 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585664 chr11:60561540-60561560
64251 chr11 60561548 60561548 1 + C T UCEC 60561546 + 60561526 60561566 41 CTGGAGAGCCCATTTGAGTCCCCGATCTGGAGAATGTACCC CTGGAGAGCCCATTTGAGTCCCTGATCTGGAGAATGTACCC < 41bp 0.738749984532388 0.461136340815284 0.046409458 0.0632481 prediction 0.477499969064777 Functional Loss - MS4A10 ENSG00000172689 CDS Human protein_coding chr11:60561546 chr11:60561548 nonsynonymous SNV 0.005 0 23 hm5C_associated_SNPs_69887 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585664 chr11:60561540-60561560
64251 chr19 54377173 54377173 1 + C T KIRC 54377171 + 54377151 54377191 41 CCTATGTCCAGTTCCTGTCCCACGGCCGTTCGCGGGACCAC CCTATGTCCAGTTCCTGTCCCATGGCCGTTCGCGGGACCAC < 41bp 0.769660411384514 0.530911076174892 0.033822924 0.056759357 prediction 0.477498670419244 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377171 chr19:54377173 synonymous SNV . 0 23 hm5C_associated_SNPs_69888 0 0 9 PTBP1 POSTAR2 GSE57278,GSM1486178 chr19:54377160-54377180
64251 chr6 167708183 167708183 1 + G T SARC 167708181 + 167708161 167708201 41 TCCGTGGGCAACTTCTTCGCCAGCTGGTACGCAGCCACCAC TCCGTGGGCAACTTCTTCGCCATCTGGTACGCAGCCACCAC < 41bp 0.738738543267409 0.386453878272499 0.574948 0.13083935 prediction 0.477477086534817 Functional Loss - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167708181 chr6:167708183 nonsynonymous SNV 0.930 1 23 hm5C_associated_SNPs_69890 0 0 1 NOL12 POSTAR2 ENCODE chr6:167708135-167708185
64251 chr16 2203526 2203526 1 + G A rs375558851 2203523 + 2203503 2203543 41 TTGTTGCCCAGTGGCCAACGCCCGAGTGTCTGTTTTCAGGA TTGTTGCCCAGTGGCCAACGCCCAAGTGTCTGTTTTCAGGA < 41bp 0.738736078721077 0.499307406479211 0.11607978 0.08627814 prediction 0.477472157442153 Functional Loss - RAB26 ENSG00000167964 UTR3 Human protein_coding chr16:2203523 chr16:2203526 . . 0 24 hm5C_associated_SNPs_69894 0 0 1 RBM15 POSTAR2 ENCODE chr16:2203504-2203584
64251 chr19 6531261 6531261 1 + G C rs548530723 6531257 + 6531237 6531277 41 TCCGCGGCCAGCCCGAGACTCCGCGAGGGTCCCGAGCTTTC TCCGCGGCCAGCCCGAGACTCCGCCAGGGTCCCGAGCTTTC < 41bp 0.738730446838948 0.448661826974341 0.4372635 0.07386306 prediction 0.477460893677895 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6531257 chr19:6531261 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_69897 0 0 1 HNRNPC POSTAR2 SRX1438577 chr19:6531260-6531280
64251 chr11 63987045 63987045 1 + G A UCEC 63987042 + 63987022 63987062 41 CGGGGAGGTGGGGGAGCCGGCTGGCACAGACCCAGGGCTGG CGGGGAGGTGGGGGAGCCGGCTGACACAGACCCAGGGCTGG < 41bp 0.738729494656384 0.485581790605325 0.43069282 0.36002225 prediction 0.477458989312768 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987042 chr11:63987045 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_69898 0 0 5 DDX24 POSTAR2 ENCODE chr11:63987017-63987126
64251 chr11 63987936 63987936 1 + G A STAD 63987933 + 63987913 63987953 41 GCAGTATGCCCGCTGGATGGCTGGCTGCCGCCTGGCCTCCA GCAGTATGCCCGCTGGATGGCTGACTGCCGCCTGGCCTCCA < 41bp 0.738726813484796 0.498120363243673 0.1877358 0.17689684 prediction 0.477453626969592 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987933 chr11:63987936 nonsynonymous SNV 0.973 1 24 hm5C_associated_SNPs_69901 0 0 6 BUD13 POSTAR2 ENCODE chr11:63987864-63987936
64251 chr5 154193517 154193517 1 + G T HNSC 154193515 + 154193495 154193535 41 GGAGGTGGCGGCGGTGAGGGCAGGAAGCGGTGCCCCTCCCA GGAGGTGGCGGCGGTGAGGGCATGAAGCGGTGCCCCTCCCA < 41bp 0.888580235030332 0.649855731388729 0.90298134 0.83984685 prediction 0.477449007283206 Functional Loss - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154193515 chr5:154193517 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_69904 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:154193484-154193518
64251 chr10 101090132 101090132 1 + G A SKCM 101090129 + 101090109 101090149 41 ACTTCCCGTGGCTGCCGGCGCTCGTGTGCACCGGCGCGGTA ACTTCCCGTGGCTGCCGGCGCTCATGTGCACCGGCGCGGTA < 41bp 0.738720741766268 0.481811890259061 0.38157746 0.248613 prediction 0.477441483532535 Functional Loss - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101090129 chr10:101090132 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_69906 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:101090131-101090132
64251 chr19 50155866 50155866 1 + G A rs545504854 50155863 + 50155843 50155883 41 GACTCCGAGGGACTGAGCGGCGAGGAGCGGGGCGGCAAGAG GACTCCGAGGGACTGAGCGGCGAAGAGCGGGGCGGCAAGAG < 41bp 0.753545460466607 0.514827259197082 0.73348635 0.63709104 prediction 0.477436402539049 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155863 chr19:50155866 synonymous SNV . 0 24 hm5C_associated_SNPs_69909 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50155796-50155880
64251 chr19 58904472 58904472 1 + G A STAD 58904469 + 58904449 58904489 41 TCACTAACTCCATGATGATGCACGGCCGCAACAACGGCAAG TCACTAACTCCATGATGATGCACAGCCGCAACAACGGCAAG < 41bp 0.738714141834009 0.499174082095211 0.1095877 0.035951883 prediction 0.477428283668017 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904469 chr19:58904472 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_69915 0 0 27 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58904340-58904500
64251 chr19 58904471 58904471 1 + C T UCEC 58904469 + 58904449 58904489 41 TCACTAACTCCATGATGATGCACGGCCGCAACAACGGCAAG TCACTAACTCCATGATGATGCATGGCCGCAACAACGGCAAG < 41bp 0.738714141834009 0.482005590108074 0.1095877 0.11282867 prediction 0.477428283668017 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904469 chr19:58904471 synonymous SNV . 0 23 hm5C_associated_SNPs_69916 0 0 28 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58904340-58904500
64251 chr12 7055084 7055084 1 + G A CESC 7055081 + 7055061 7055101 41 TGGTGGCAGCGTGGCCGCCTCCTGAGAGTTGGCCCTCCCTT TGGTGGCAGCGTGGCCGCCTCCTAAGAGTTGGCCCTCCCTT < 41bp 0.76738856250995 0.528678291652276 0.18834579 0.052972883 prediction 0.477420541715348 Functional Loss - C12orf57 ENSG00000111678 CDS Human protein_coding chr12:7055081 chr12:7055084 synonymous SNV . 0 24 hm5C_associated_SNPs_69920 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:7055063-7055142
64251 chr1 150307469 150307469 1 + T C rs587699756 150307468 + 150307448 150307488 41 CCTGGATGAGCAAGGGCGCACTGTAGATGCAACAGGCAAGG CCTGGATGAGCAAGGGCGCACCGTAGATGCAACAGGCAAGG < 41bp 0.738708671897359 0.485701330221672 0.2077002 0.2696339 prediction 0.477417343794718 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307468 chr1:150307469 synonymous SNV . 0 22 hm5C_associated_SNPs_69922 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:150307425-150307549
64251 chr22 50962178 50962178 1 + G T BLCA 50962175 + 50962155 50962195 41 TAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTC TAGATGGCAATGGAGTGGTCCACTATGTAGTCCTGGTCCTC < 41bp 0.738701356158023 0.353670833113883 0.13090855 0.08127022 prediction 0.477402712316046 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962175 chr22:50962178 synonymous SNV . 0 24 hm5C_associated_SNPs_69927 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:50962133-50962178
64251 chr22 50962177 50962177 1 + C T COAD 50962175 + 50962155 50962195 41 TAGATGGCAATGGAGTGGTCCACGATGTAGTCCTGGTCCTC TAGATGGCAATGGAGTGGTCCATGATGTAGTCCTGGTCCTC < 41bp 0.738701356158023 0.470911310004718 0.13090855 0.19671908 prediction 0.477402712316046 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962175 chr22:50962177 nonsynonymous SNV 0.808 5 23 hm5C_associated_SNPs_69928 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:50962133-50962178
64251 chr8 418991 418991 1 + A C rs564896072 418990 + 418970 419010 41 CATCACTGAAAGTCAGAGGCCAAGGAAATCATTTCTACTTC CATCACTGAAAGTCAGAGGCCCAGGAAATCATTTCTACTTC < 41bp 0.738700818993381 0.483205796535643 0.3381927 0.32772955 prediction 0.477401637986762 Functional Loss - FBXO25 ENSG00000147364 UTR3 Human protein_coding chr8:418990 chr8:418991 . . 0 22 hm5C_associated_SNPs_69929 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr8:418973-418999
64251 chr1 86046594 86046594 1 + G T rs561065476 86046591 + 86046571 86046611 41 GCCACCCCGACCCCGCTGCGCACGGCCTGTCCGCTGCACAC GCCACCCCGACCCCGCTGCGCACTGCCTGTCCGCTGCACAC < 41bp 0.856966470385672 0.618266453749618 0.2215552 0.066503525 prediction 0.477400033272108 Functional Loss - CYR61 ENSG00000142871 UTR5 Human protein_coding chr1:86046591 chr1:86046594 . . 0 24 hm5C_associated_SNPs_69930 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:86046571-86046599
64251 chr2 241533448 241533448 1 + G T COAD 241533445 + 241533425 241533465 41 CCTGGGGCCGGCGGTGCTGGCAGGGGCTCTGGAGAGAGGGG CCTGGGGCCGGCGGTGCTGGCAGTGGCTCTGGAGAGAGGGG < 41bp 0.920727684741344 0.682034147162991 0.90214545 0.5046375 prediction 0.477387075156708 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241533445 chr2:241533448 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_69933 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:241533439-241533494
64251 chr6 4892576 4892576 1 + T C rs543325062 4892575 + 4892555 4892595 41 TCAGGTGCCCGGCCCTGTGACTGCAGCCATGGCCACAGGCT TCAGGTGCCCGGCCCTGTGACCGCAGCCATGGCCACAGGCT < 41bp 0.774872149909668 0.536184157963446 0.2558973 0.29702356 prediction 0.477375983892443 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892575 chr6:4892576 synonymous SNV . 0 22 hm5C_associated_SNPs_69935 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:4892556-4892583
64251 chr2 198571179 198571179 1 + G T UCEC 198571176 + 198571156 198571196 41 GTCTGTGGCCAAAAGATGTCCAAGAGCTTGGGCAACGTGGT GTCTGTGGCCAAAAGATGTCCAATAGCTTGGGCAACGTGGT < 41bp 0.738684690478644 0.346069192296939 0.06417087 0.056044728 prediction 0.477369380957287 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571176 chr2:198571179 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_69938 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:198571151-198571183
64251 chr7 152522171 152522171 1 + G T UCEC 152522169 + 152522149 152522189 41 ATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTG ATGTTGTTGATGAAGTAATACATAACTGCCCCATCGATGTG < 41bp 0.738684396391612 0.39218093181313 0.21073523 0.15473053 prediction 0.477368792783224 Functional Loss - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152522169 chr7:152522171 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_69939 0 0 3 GRWD1 POSTAR2 ENCODE chr7:152522129-152522243
64251 chr12 27863869 27863869 1 + G T SKCM 27863867 + 27863847 27863887 41 CTGCCGTCTACTCGGCCACTCCGGTCCCGACACCTAGCCTG CTGCCGTCTACTCGGCCACTCCTGTCCCGACACCTAGCCTG < 41bp 0.73868246043005 0.377988219228518 0.35663977 0.23026925 prediction 0.4773649208601 Functional Loss - MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27863867 chr12:27863869 synonymous SNV . 0 23 hm5C_associated_SNPs_69940 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:27863824-27863880
64251 chr17 6943112 6943112 1 + C T UCEC 6943110 + 6943090 6943130 41 CGGGATGTGACAGGCAACTACACGGCTTCTTTTGTGGTGGC CGGGATGTGACAGGCAACTACATGGCTTCTTTTGTGGTGGC < 41bp 0.738675017151113 0.479949928753319 0.8530489 0.59968024 prediction 0.477350034302227 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6943110 chr17:6943112 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_69945 0 0 2 U2AF2 POSTAR2 ENCODE chr17:6943069-6943163
64251 chr10 16528492 16528492 1 + G T SARC 16528489 + 16528469 16528509 41 TCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCT TCCAGGCCACAGCTCATGCCCAGTCTCAGCTTGGTTGTCCT < 41bp 0.738671886829292 0.335559112192353 0.4445744 0.01913017 prediction 0.477343773658585 Functional Loss - PTER ENSG00000165983 CDS Human protein_coding chr10:16528489 chr10:16528492 nonsynonymous SNV 0.922 0 24 hm5C_associated_SNPs_69948 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:16528480-16528525
64251 chr4 3447795 3447795 1 + C T SKCM 3447793 + 3447773 3447813 41 CCTCACCAGAGTCCAACTGTCACCGGATCTCCTGGCGACCC CCTCACCAGAGTCCAACTGTCATCGGATCTCCTGGCGACCC < 41bp 0.738654230091195 0.494941087464407 0.8362924 0.8548475 prediction 0.477308460182389 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3447793 chr4:3447795 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_69953 0 0 6 BUD13 POSTAR2 ENCODE chr4:3447715-3447798
64251 chr12 132404022 132404022 1 + C T COAD 132404020 + 132404000 132404040 41 CTGCCTGCCGCCCCCAGCTTCGCGGAACAGCTGGTGCTGTA CTGCCTGCCGCCCCCAGCTTCGTGGAACAGCTGGTGCTGTA < 41bp 0.784758263642693 0.546108421571572 0.8368999 0.8709386 prediction 0.477299684142241 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132404020 chr12:132404022 nonsynonymous SNV 0.015 1 23 hm5C_associated_SNPs_69955 0 0 13 BUD13 POSTAR2 ENCODE chr12:132403978-132404055
64251 chr8 67342103 67342103 1 + G T LUSC 67342100 + 67342080 67342120 41 CCTCCCCAAGGAGAAGGTGCCCCGGGGCTCCGGCAAGAAAA CCTCCCCAAGGAGAAGGTGCCCCTGGGCTCCGGCAAGAAAA < 41bp 0.738648682593264 0.349381948076093 0.73224485 0.30217797 prediction 0.477297365186528 Functional Loss - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67342100 chr8:67342103 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_69956 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:67342092-67342114
64251 chr2 64682545 64682545 1 + G T LUAD 64682542 + 64682522 64682562 41 TCAAGCGGACGTGTACTTCCCACGACTGGTAAATGATTTTG TCAAGCGGACGTGTACTTCCCACTACTGGTAAATGATTTTG < 41bp 0.90829181679073 0.669649446271391 0.05191195 0.08357534 prediction 0.477284741038678 Functional Loss - LGALSL ENSG00000119862 CDS Human protein_coding chr2:64682542 chr2:64682545 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_69960 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:64682499-64682545
64251 chr7 97822795 97822795 1 + C T COAD 97822793 + 97822773 97822813 41 CTCTGGAGTCAGTGGATGTCCACGAAGCGCTACTGGACTCT CTCTGGAGTCAGTGGATGTCCATGAAGCGCTACTGGACTCT < 41bp 0.738628430123772 0.46671697099888 0.17023808 0.15132636 prediction 0.477256860247543 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822793 chr7:97822795 synonymous SNV . 0 23 hm5C_associated_SNPs_69968 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:97822728-97822795
64251 chr21 47423894 47423894 1 + C T rs141237809 47423892 + 47423872 47423912 41 CCCTGCTCCGCGGTGTCTTCCACCAGACAGTCTCCAGGAAG CCCTGCTCCGCGGTGTCTTCCATCAGACAGTCTCCAGGAAG < 41bp 0.798716096684209 0.560105470974229 0.22137758 0.1641137 prediction 0.477221251419961 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47423892 chr21:47423894 synonymous SNV . 0 23 hm5C_associated_SNPs_69975 1 0 2 FUS POSTAR2 GSE40653,GSM998875 chr21:47423880-47423900
64251 chr16 778950 778950 1 + G C OV 778946 + 778926 778966 41 GTGGGGGGGGAGGGAACAGGCTTCGGGGTGGGGGGGGCTCT GTGGGGGGGGAGGGAACAGGCTTCCGGGTGGGGGGGGCTCT < 41bp 0.738610067450658 0.456206546139086 0.5621391 0.26613045 prediction 0.477220134901316 Functional Loss - HAGHL ENSG00000103253 CDS Human protein_coding chr16:778946 chr16:778950 nonsynonymous SNV 0.000 2 25 hm5C_associated_SNPs_69976 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:778945-778969
64251 chr17 72832676 72832676 1 + G A CESC 72832673 + 72832653 72832693 41 TTCCTGGTGTACCACTGCCGCAGGGACACCCAGCTGGCCTT TTCCTGGTGTACCACTGCCGCAGAGACACCCAGCTGGCCTT < 41bp 0.761811637454349 0.523208922844298 0.92124707 0.8920059 prediction 0.477205429220101 Functional Loss - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72832673 chr17:72832676 synonymous SNV . 0 24 hm5C_associated_SNPs_69979 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:72832676-72832677
64251 chr16 70806020 70806020 1 - A G STAD 70806021 - 70806001 70806041 41 TAGCGGCATCAGTGTCTTCACTGCAGCCAGGTAAGTGGCTT TAGCGGCATCAGTGTCTTCACCGCAGCCAGGTAAGTGGCTT < 41bp 0.78307700397068 0.544475819144188 0.14828172 0.08897656 prediction 0.477202369652984 Functional Loss - VAC14 ENSG00000103043 CDS Human protein_coding chr16:70806021 chr16:70806020 synonymous SNV . 0 22 hm5C_associated_SNPs_69980 0 0 2 PPIG POSTAR2 ENCODE chr16:70806009-70806068
64251 chr1 244218538 244218538 1 + G T LIHC 244218536 + 244218516 244218556 41 CGAGCGCAGGTTCACGCAGTCCGGGGACCTGTACAGACACA CGAGCGCAGGTTCACGCAGTCCTGGGACCTGTACAGACACA < 41bp 0.73859581107347 0.3991691632593 0.8846601 0.14330575 prediction 0.47719162214694 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218536 chr1:244218538 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_69984 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:244218534-244218559
64251 chr14 105936295 105936295 1 + G A CESC 105936292 + 105936272 105936312 41 GGATGAACTGGATCGACGCCCCGGATGACGTGTTCTACATG GGATGAACTGGATCGACGCCCCGAATGACGTGTTCTACATG < 41bp 0.738594888503915 0.494961817299601 0.77761114 0.20319635 prediction 0.47718977700783 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105936292 chr14:105936295 nonsynonymous SNV 0.934 0 24 hm5C_associated_SNPs_69985 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:105936276-105936298
64251 chr8 79627472 79627472 1 + C T SKCM 79627470 + 79627450 79627490 41 TTATAGAGCTAATGTCAAACCCCGAAATTCCACACCACCTA TTATAGAGCTAATGTCAAACCCTGAAATTCCACACCACCTA < 41bp 0.832806161512448 0.594217248644423 0.0549908 0.05243212 prediction 0.47717782573605 Functional Loss - ZC2HC1A ENSG00000104427 CDS Human protein_coding chr8:79627470 chr8:79627472 stopgain 0.872 0 23 hm5C_associated_SNPs_69987 0 0 1 U2AF2 POSTAR2 ENCODE chr8:79627448-79627523
64251 chr14 20940628 20940628 1 + G A PAAD 20940625 + 20940605 20940645 41 CGGTGAAATCCCCAACTTTCCCCGAAGTACAGGTACTGGCA CGGTGAAATCCCCAACTTTCCCCAAAGTACAGGTACTGGCA < 41bp 0.739291507163809 0.500709358846174 0.43211645 0.08135557 prediction 0.477164296635269 Functional Loss - PNP ENSG00000198805 CDS Human protein_coding chr14:20940625 chr14:20940628 nonsynonymous SNV 0.639 0 24 hm5C_associated_SNPs_69989 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20940530-20940628
64251 chr11 46726414 46726414 1 + G A LUSC 46726411 + 46726391 46726431 41 TTTCTTTGCACTGAGTGTGGCAAGAGCTATAGCTCAGAGGA TTTCTTTGCACTGAGTGTGGCAAAAGCTATAGCTCAGAGGA < 41bp 0.746770137288152 0.508191371822249 0.395384 0.15460974 prediction 0.477157530931806 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726411 chr11:46726414 synonymous SNV . 0 24 hm5C_associated_SNPs_69992 0 0 2 RBM15 POSTAR2 ENCODE chr11:46726372-46726419
64251 chr14 70235600 70235600 1 + C T BLCA 70235598 + 70235578 70235618 41 CCGTTTTAGTAGTCGCAGACCTCGAAATGATAGACGGTATG CCGTTTTAGTAGTCGCAGACCTTGAAATGATAGACGGTATG < 41bp 0.738578504732206 0.443474905623886 0.67300355 0.10924652 prediction 0.477157009464412 Functional Loss - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235598 chr14:70235600 stopgain 1.000 0 23 hm5C_associated_SNPs_69993 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:70235503-70235643
64251 chr6 89856219 89856219 1 + G T MESO 89856216 + 89856196 89856236 41 CTGCGAGTACGACGCGCTGCCCGGCATCGGCCACGCCTGCG CTGCGAGTACGACGCGCTGCCCGTCATCGGCCACGCCTGCG < 41bp 0.738577761871037 0.358442634299 0.2878312 0.021294504 prediction 0.477155523742073 Functional Loss - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89856216 chr6:89856219 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_69995 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:89856200-89856220
64251 chr7 112090830 112090830 1 + G C LUAD 112090826 + 112090806 112090846 41 AGGAGCAGCCGCAGCGACGGCGGCGACAGCAGGTAAGGGGT AGGAGCAGCCGCAGCGACGGCGGCCACAGCAGGTAAGGGGT < 41bp 0.834122475406732 0.595545238578381 0.85196185 0.83940804 prediction 0.477154473656703 Functional Loss - IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112090826 chr7:112090830 synonymous SNV . 0 25 hm5C_associated_SNPs_69996 0 0 2 BUD13 POSTAR2 ENCODE chr7:112090767-112090847
64251 chr1 181018350 181018350 1 + C T UCEC 181018348 + 181018328 181018368 41 CCATGGATGGCAGAGAACCTCGCGCCTGATCACTGGGAGAG CCATGGATGGCAGAGAACCTCGTGCCTGATCACTGGGAGAG < 41bp 0.7951383286433 0.556561300440803 0.5359862 0.66482013 prediction 0.477154056404993 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018348 chr1:181018350 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_69997 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr1 3394482 3394482 1 + G C BLCA 3394478 + 3394458 3394498 41 CCTCCCGGTGGCTGCTGAAGCGCGGAGAGCTGTTCTTAGTG CCTCCCGGTGGCTGCTGAAGCGCGCAGAGCTGTTCTTAGTG < 41bp 0.854747970414801 0.61617437438524 0.5608279 0.27574015 prediction 0.477147192059122 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3394478 chr1:3394482 nonsynonymous SNV 0.390 5 25 hm5C_associated_SNPs_70000 0 0 3 GRWD1 POSTAR2 ENCODE chr1:3394445-3394494
64251 chr1 44684367 44684367 1 + T C PAAD 44684366 + 44684346 44684386 41 TAAGATACCAGTATTTGATGCTGGGCACGAACGACGGCGGA TAAGATACCAGTATTTGATGCCGGGCACGAACGACGGCGGA < 41bp 0.73909296421104 0.500524257521748 0.51783204 0.833349 prediction 0.477137413378583 Functional Loss - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684366 chr1:44684367 synonymous SNV . 0 22 hm5C_associated_SNPs_70001 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:44684360-44684380
64251 chr2 238990769 238990769 1 + G A HNSC 238990766 + 238990746 238990786 41 CTACCTCCCATCCTCGTGCACACGGATGCTGCACAGGCCTT CTACCTCCCATCCTCGTGCACACAGATGCTGCACAGGCCTT < 41bp 0.763272714252731 0.524722961488299 0.17732003 0.057281703 prediction 0.477099505528866 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990766 chr2:238990769 synonymous SNV . 0 24 hm5C_associated_SNPs_70007 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:238990737-238990769
64251 chrX 55744305 55744305 1 + G A rs748908097 55744302 + 55744282 55744322 41 TGACTCTCCGAGCGGCCGGGCTCGGAAGCCACGAGCCAGCT TGACTCTCCGAGCGGCCGGGCTCAGAAGCCACGAGCCAGCT < 41bp 0.738545893472861 0.497738352363471 0.2010414 0.12738004 prediction 0.477091786945722 Functional Loss - RRAGB ENSG00000083750 UTR5 Human protein_coding chrX:55744302 chrX:55744305 . . 0 24 hm5C_associated_SNPs_70011 0 0 3 GRWD1 POSTAR2 ENCODE chrX:55744255-55744308
64251 chr13 28197120 28197120 1 + C T LUSC 28197118 + 28197098 28197138 41 ACTGTGTGACATTTGTATTGCACGAGGAAGACCATACCCTA ACTGTGTGACATTTGTATTGCATGAGGAAGACCATACCCTA < 41bp 0.805838489096731 0.567296432942149 0.20541012 0.23649234 prediction 0.477084112309164 Functional Loss - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28197118 chr13:28197120 synonymous SNV . 0 23 hm5C_associated_SNPs_70012 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:28197073-28197156
64251 chr5 177034356 177034356 1 + C T COAD 177034354 + 177034334 177034374 41 TTCCTGGAGAGCAGCAACAGCACGGACTACATTGCCATGCA TTCCTGGAGAGCAGCAACAGCATGGACTACATTGCCATGCA < 41bp 0.789268197818229 0.550727385736694 0.77396774 0.6626838 prediction 0.47708162416307 Functional Loss - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177034354 chr5:177034356 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_70013 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:177034350-177034365
64251 chr19 13889020 13889020 1 + G C rs74675515 13889016 + 13888996 13889036 41 CCAAGACACCTTCCTGAGGACGCTGGCCCCAGTGCAGGCCA CCAAGACACCTTCCTGAGGACGCTCGCCCCAGTGCAGGCCA < 41bp 0.738540489207835 0.455033052551398 0.23893648 0.23294905 prediction 0.477080978415669 Functional Loss - C19orf53 ENSG00000104979 UTR3 Human protein_coding chr19:13889016 chr19:13889020 . . 0 25 hm5C_associated_SNPs_70014 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:13888998-13889036
64251 chr5 156746857 156746857 1 + G T UCEC 156746855 + 156746835 156746875 41 CATCAGGAACACCATCTACGCGGCATTGCAGGACTTCGCCC CATCAGGAACACCATCTACGCGTCATTGCAGGACTTCGCCC < 41bp 0.889990607119371 0.651459833765856 0.28465563 0.04710409 prediction 0.477061546707029 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156746855 chr5:156746857 nonsynonymous SNV 0.622 1 23 hm5C_associated_SNPs_70017 0 0 1 BUD13 POSTAR2 ENCODE chr5:156746847-156746939
64251 chr7 100732007 100732007 1 + C T UCEC 100732005 + 100731985 100732025 41 AGGCAGGCTCAAGTCAATTTCCCGGGAGCCCAGCCCAGCCC AGGCAGGCTCAAGTCAATTTCCTGGGAGCCCAGCCCAGCCC < 41bp 0.780390457178775 0.541861004379031 0.87802577 0.78572357 prediction 0.477058905599488 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732005 chr7:100732007 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_70018 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731995-100732033
64251 chr11 102218007 102218007 1 + G C rs34115368 102218003 + 102217983 102218023 41 TCGGGAGCGCCCGGGCTGATCCGAGCCGAGCGGGCCGTATC TCGGGAGCGCCCGGGCTGATCCGACCCGAGCGGGCCGTATC < 41bp 0.826837203011379 0.588312367079753 0.905275 0.5601558 prediction 0.477049671863253 Functional Loss - BIRC2 ENSG00000110330 UTR5 Human protein_coding chr11:102218003 chr11:102218007 . . 0 25 hm5C_associated_SNPs_70020 0 0 10 EIF3B POSTAR2 GSE65004,GSM1585669 chr11:102218000-102218020
64251 chr14 64855129 64855129 1 + G T SARC 64855127 + 64855107 64855147 41 TTGGTGGTGTCCATCGTGGGCAGCGGACTAATAAAGGCCAT TTGGTGGTGTCCATCGTGGGCATCGGACTAATAAAGGCCAT < 41bp 0.738519821611619 0.478845704887902 0.48021588 0.11685389 prediction 0.477039643223238 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64855127 chr14:64855129 nonsynonymous SNV 0.684 1 23 hm5C_associated_SNPs_70025 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:64855080-64855140
64251 chr1 212273915 212273915 1 + G T UCEC 212273912 + 212273892 212273932 41 GGAGACCAAGATCATGTCTCCGAGAAAAGCCCTTATTCCTG GGAGACCAAGATCATGTCTCCGATAAAAGCCCTTATTCCTG < 41bp 0.738512055027365 0.346556435422449 0.42607316 0.13195482 prediction 0.477024110054731 Functional Loss - DTL ENSG00000143476 CDS Human protein_coding chr1:212273912 chr1:212273915 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_70028 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212273874-212273924
64251 chr2 28634831 28634831 1 + T C HNSC 28634830 + 28634810 28634850 41 TGGAGGAGGAGAAGTCAGGCCTGCAGAAGGAGATTGCTGAG TGGAGGAGGAGAAGTCAGGCCCGCAGAAGGAGATTGCTGAG < 41bp 0.757334349968182 0.518825247272156 0.5160909 0.23694694 prediction 0.477018205392051 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28634830 chr2:28634831 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_70030 0 0 3 DDX6 POSTAR2 ENCODE chr2:28634799-28634856
64251 chr17 17394956 17394956 1 + G A rs555612650 17394953 + 17394933 17394973 41 GGGGCTCCTGTGCTGCTGCGCGCGCTTCGCCTGTGCGGGAG GGGGCTCCTGTGCTGCTGCGCGCACTTCGCCTGTGCGGGAG < 41bp 0.756953935473286 0.518452008417334 0.15798944 0.053987175 prediction 0.477003854111904 Functional Loss - MED9 ENSG00000141026 UTR3 Human protein_coding chr17:17394953 chr17:17394956 . . 0 24 hm5C_associated_SNPs_70033 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:17394954-17394986
64251 chr5 94991874 94991874 1 + C T SKCM 94991872 + 94991852 94991892 41 TCAGCAAAACCCAAGTGGTGCTCCAAAGGAATAAAGCAAAG TCAGCAAAACCCAAGTGGTGCTTCAAAGGAATAAAGCAAAG < 41bp 0.738498079760937 0.452964727235394 0.68070656 0.085473746 prediction 0.476996159521875 Functional Loss - RFESD ENSG00000175449 CDS Human protein_coding chr5:94991872 chr5:94991874 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_70036 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:94991866-94991877
64251 chrX 68061004 68061004 1 + G A rs188235570 68061001 + 68060981 68061021 41 CAGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCAGGAA CAGTACAAGAGGGCCTGGGGCACAATGTGGTCAGCCAGGAA < 41bp 0.752852007512734 0.51435565282055 0.5070951 0.5048195 prediction 0.476992709384368 Functional Loss - EFNB1 ENSG00000090776 UTR3 Human protein_coding chrX:68061001 chrX:68061004 . . 0 24 hm5C_associated_SNPs_70037 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:68061001-68061012
64251 chr2 228221826 228221826 1 + G C CESC 228221825 + 228221805 228221845 41 TTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACATCAG TTAATAGCTGGCTCTGGTTTCCCCGCTAGAGGTAACATCAG < 41bp 0.738495444327631 0.442576220956845 0.38318342 0.192271 prediction 0.476990888655262 Functional Loss - MFF ENSG00000168958 CDS Human protein_coding chr2:228221825 chr2:228221826 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_70038 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:228221818-228221841
64251 chr3 15475910 15475910 1 + C T SKCM 15475908 + 15475888 15475928 41 GGAACAGCAGCCCACTCGTCCTCCACAGACGTCACAGCCAC GGAACAGCAGCCCACTCGTCCTTCACAGACGTCACAGCCAC < 41bp 0.859594781911869 0.621118833220967 0.89960027 0.035559654 prediction 0.476951897381803 Functional Loss - EAF1 ENSG00000144597 CDS Human protein_coding chr3:15475908 chr3:15475910 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_70046 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:15475886-15475911
64251 chr4 110415839 110415839 1 + C T BLCA 110415837 + 110415817 110415857 41 TGAACCTGATCCTGCTTCTGCTCCAGCTCCAGCTTCAGCTC TGAACCTGATCCTGCTTCTGCTTCAGCTCCAGCTTCAGCTC < 41bp 0.845586310411256 0.60712609415055 0.41465738 0.046024054 prediction 0.476920432521413 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415837 chr4:110415839 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_70052 0 0 5 IGF2BP1 POSTAR2 ENCODE chr4:110415823-110415933
64251 chr19 10225479 10225479 1 + G A rs118041227 10225476 + 10225456 10225496 41 GGAGAACCCTGAGGGCAGGGCCCGAGCCCCGACACATCCCT GGAGAACCCTGAGGGCAGGGCCCAAGCCCCGACACATCCCT < 41bp 0.753503588547559 0.515045398879328 0.1415928 0.084955096 prediction 0.476916379336461 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000244165 UTR3 Human protein_coding chr19:10225476 chr19:10225479 . . 0 24 hm5C_associated_SNPs_70053 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10225412-10225491
64251 chr11 129990686 129990686 1 + C T UCEC 129990684 + 129990664 129990704 41 GGATGGAGGTGTGTGAGAATCACCAGCACTGGCACACGGTA GGATGGAGGTGTGTGAGAATCATCAGCACTGGCACACGGTA < 41bp 0.827355958453473 0.588900424057606 0.21021837 0.16466436 prediction 0.476911068791734 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129990684 chr11:129990686 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_70054 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:129990660-129990703
64251 chr6 30593315 30593315 1 + G T LUAD 30593312 + 30593292 30593332 41 CCACATCCCCCAGGTTGAACCACGGGACCTTGACTTCAGTA CCACATCCCCCAGGTTGAACCACTGGACCTTGACTTCAGTA < 41bp 0.738452363838319 0.36718399754735 0.50628257 0.23077673 prediction 0.476904727676637 Functional Loss - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30593312 chr6:30593315 nonsynonymous SNV 0.314 3 24 hm5C_associated_SNPs_70056 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:30593279-30593349
64251 chr18 2913257 2913257 1 + G T KIRP 2913254 + 2913234 2913274 41 TTTGCATACCTGCGGGGGCCCGGGGGCATTCCACCTCATCG TTTGCATACCTGCGGGGGCCCGGTGGCATTCCACCTCATCG < 41bp 0.927694081153123 0.689247669118509 0.9438226 0.8565004 prediction 0.476892824069228 Functional Loss - EMILIN2 ENSG00000132205 CDS Human protein_coding chr18:2913254 chr18:2913257 nonsynonymous SNV 0.220 4 24 hm5C_associated_SNPs_70059 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:2913237-2913274
64251 chr4 146461145 146461145 1 + G T COAD 146461142 + 146461122 146461162 41 TAGCAGTTACCCAAACTCTCCTGGGAGCAGCAGCAGCACCT TAGCAGTTACCCAAACTCTCCTGTGAGCAGCAGCAGCACCT < 41bp 0.738445445171304 0.347901740975611 0.85090435 0.13436481 prediction 0.476890890342608 Functional Loss - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146461142 chr4:146461145 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_70061 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:146461121-146461148
64251 chr8 145066426 145066426 1 + C T BLCA 145066424 + 145066404 145066444 41 CAACTGCAGTCGGTCCTGACCGCCAGCCTGTCGTACATGGT CAACTGCAGTCGGTCCTGACCGTCAGCCTGTCGTACATGGT < 41bp 0.738438550214329 0.466836274898258 0.33744252 0.09603673 prediction 0.476877100428657 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066424 chr8:145066426 nonsynonymous SNV 0.900 0 23 hm5C_associated_SNPs_70067 0 0 2 SF3B4 POSTAR2 ENCODE chr8:145066366-145066426
64251 chr1 226026573 226026573 1 + T C rs140788022 226026572 + 226026552 226026592 41 TATGGCTTCTCAGAGGCATCCTCCAAGAAGGGTACGGGGCT TATGGCTTCTCAGAGGCATCCCCCAAGAAGGGTACGGGGCT < 41bp 0.738438513017895 0.463574286434367 0.96572506 0.2242091 prediction 0.476877026035791 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026572 chr1:226026573 nonsynonymous SNV 0.962 1 22 hm5C_associated_SNPs_70068 0 0 2 YBX3 POSTAR2 ENCODE chr1:226026522-226026575
64251 chr2 132021825 132021825 1 + A T SKCM 132021821 + 132021801 132021841 41 CAGGAGATGGCCACGGCGGCCTCCAGCTCCTCCCTAGAGAA CAGGAGATGGCCACGGCGGCCTCCTGCTCCTCCCTAGAGAA < 41bp 0.73843550586638 0.403810656095499 0.9261447 0.11393896 prediction 0.476871011732759 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021821 chr2:132021825 nonsynonymous SNV 0.412 4 25 hm5C_associated_SNPs_70070 0 0 6 EIF3H POSTAR2 ENCODE chr2:132021758-132021837
64251 chr12 69986785 69986785 1 + T C rs201962311 69986784 + 69986764 69986804 41 TTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAGAAA TTCCCGGGTAAGAGTTGACTCCACAGCAAAGGTTGCAGAAA < 41bp 0.738429967439244 0.478924865941402 0.8826057 0.24929166 prediction 0.476859934878487 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986784 chr12:69986785 synonymous SNV . 0 22 hm5C_associated_SNPs_70073 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69986738-69986799
64251 chr3 119526189 119526189 1 + C T UCEC 119526187 + 119526167 119526207 41 CCTGGAAAGCCCAGTGTCAACGCAGATGAGGAAGTCGGAGG CCTGGAAAGCCCAGTGTCAACGTAGATGAGGAAGTCGGAGG < 41bp 0.790981779352516 0.55255397569879 0.21603215 0.20299569 prediction 0.476855607307452 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119526187 chr3:119526189 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_70075 0 0 1 GRWD1 POSTAR2 ENCODE chr3:119526105-119526197
64251 chr2 202150023 202150023 1 + G T CESC 202150021 + 202150001 202150041 41 TCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGG TCCAGTCACTTTGCCAGAGCCTTAGAGAGCGATGTCCTCGG < 41bp 0.738423291999047 0.441669424556414 0.38227344 0.29129624 prediction 0.476846583998093 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202150021 chr2:202150023 synonymous SNV . 0 23 hm5C_associated_SNPs_70076 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:202149999-202150037
64251 chr11 15197436 15197436 1 + G A UCEC 15197433 + 15197413 15197453 41 CCTCATCCTGGCAGGTGGCCCTGGCCCTGGAGACCCCCTGC CCTCATCCTGGCAGGTGGCCCTGACCCTGGAGACCCCCTGC < 41bp 0.73842200006863 0.488267656091994 0.8271421 0.623922 prediction 0.47684400013726 Functional Loss - INSC ENSG00000188487 CDS Human protein_coding chr11:15197433 chr11:15197436 nonsynonymous SNV 0.783 0 24 hm5C_associated_SNPs_70077 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:15197394-15197442
64251 chr20 62642772 62642772 1 + G C KIRP 62642771 + 62642751 62642791 41 GGAGGAAGCCAATGGGAACACGCAGATGGTGGAGAAGATCA GGAGGAAGCCAATGGGAACACCCAGATGGTGGAGAAGATCA < 41bp 0.738421926398979 0.42390440800673 0.13135764 0.09050745 prediction 0.476843852797958 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62642771 chr20:62642772 synonymous SNV . 0 22 hm5C_associated_SNPs_70078 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62642743-62642773
64251 chr19 18960966 18960966 1 + G T SKCM 18960963 + 18960943 18960983 41 GGCCCCTGGGGGAGACAGTCCTGGAGTGCTACAACTGCGGC GGCCCCTGGGGGAGACAGTCCTGTAGTGCTACAACTGCGGC < 41bp 0.924496447308285 0.686075746910564 0.47987348 0.23798189 prediction 0.476841400795443 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18960963 chr19:18960966 stopgain 1.000 1 24 hm5C_associated_SNPs_70079 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:18960960-18961000
64251 chr14 75182761 75182761 1 + T C UCEC 75182760 + 75182740 75182780 41 ACTTTTCCATAAAAGCCAAACTGGACTTAGTGCAGTCAATG ACTTTTCCATAAAAGCCAAACCGGACTTAGTGCAGTCAATG < 41bp 0.768554667353713 0.530146031470797 0.0595403 0.08553472 prediction 0.476817271765833 Functional Loss - FCF1 ENSG00000119616 CDS Human protein_coding chr14:75182760 chr14:75182761 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_70085 0 0 1 IGF2BP1 POSTAR2 ENCODE chr14:75182744-75182803
64251 chr2 65301482 65301482 1 + G A HNSC 65301479 + 65301459 65301499 41 ATGTTGCAGATGTTACTGACCACGGGACTGCAGCCAGGTCC ATGTTGCAGATGTTACTGACCACAGGACTGCAGCCAGGTCC < 41bp 0.738387726050857 0.498559776777389 0.63809294 0.24605358 prediction 0.476775452101714 Functional Loss - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65301479 chr2:65301482 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_70093 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:65301460-65301488
64251 chr4 4304033 4304033 1 + T C TGCT 4304032 + 4304012 4304052 41 AAAACTACCCCCCTCATTTACTGCAGGAATGTTCAGCAGAT AAAACTACCCCCCTCATTTACCGCAGGAATGTTCAGCAGAT < 41bp 0.738386313383954 0.486057017508567 0.36507097 0.4469558 prediction 0.476772626767907 Functional Loss - ZBTB49 ENSG00000168826 CDS Human protein_coding chr4:4304032 chr4:4304033 nonsynonymous SNV 0.120 1 22 hm5C_associated_SNPs_70096 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:4304011-4304033
64251 chr19 6772993 6772993 1 + G T UCEC 6772990 + 6772970 6773010 41 TACCCCATGCCATCAACCTGCGTGAGGTCAACCTGCGCCCC TACCCCATGCCATCAACCTGCGTTAGGTCAACCTGCGCCCC < 41bp 0.73838601674392 0.348146244822745 0.26385587 0.15775672 prediction 0.47677203348784 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6772990 chr19:6772993 stopgain 0.932 0 24 hm5C_associated_SNPs_70097 0 0 2 YBX3 POSTAR2 ENCODE chr19:6772954-6773017
64251 chr16 67469706 67469706 1 + C T rs143819538 67469704 + 67469684 67469724 41 CCAAACCAGGAGACATTAGCCGCGTGCTAGAGTTCACCAAG CCAAACCAGGAGACATTAGCCGTGTGCTAGAGTTCACCAAG < 41bp 0.8059085499027 0.567538313743852 0.77037483 0.697067 prediction 0.476740472317698 Functional Loss - HSD11B2 ENSG00000176387 CDS Human protein_coding chr16:67469704 chr16:67469706 synonymous SNV . 0 23 hm5C_associated_SNPs_70106 0 0 2 PPIG POSTAR2 ENCODE chr16:67469652-67469744
64251 chr1 223947089 223947089 1 + C T UCEC 223947087 + 223947067 223947107 41 GCTCAACCGCTTCAAGCTGCCGCCAGGAGAGTACATTCTCG GCTCAACCGCTTCAAGCTGCCGTCAGGAGAGTACATTCTCG < 41bp 0.818611778099035 0.580245109803299 0.18202928 0.112127095 prediction 0.476733336591473 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223947087 chr1:223947089 nonsynonymous SNV 0.290 3 23 hm5C_associated_SNPs_70108 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:223947062-223947090
64251 chr19 12920927 12920927 1 + C T STAD 12920925 + 12920905 12920945 41 GATGCCAGAGACATACCAGGCGCGGCTGCAGCAAAGTTTTC GATGCCAGAGACATACCAGGCGTGGCTGCAGCAAAGTTTTC < 41bp 0.738364130571373 0.47762653036056 0.08764115 0.10921964 prediction 0.476728261142747 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12920925 chr19:12920927 nonsynonymous SNV 0.123 3 23 hm5C_associated_SNPs_70110 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12920894-12920940
64251 chr11 70260707 70260707 1 + G A rs143311444 70260704 + 70260684 70260724 41 AAGCACTGCTCGCAGGTGGACTCGGTCCGTGGCTTCGGAGG AAGCACTGCTCGCAGGTGGACTCAGTCCGTGGCTTCGGAGG < 41bp 0.753961850357532 0.515599294504401 0.59294134 0.31549242 prediction 0.476725111706263 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70260704 chr11:70260707 synonymous SNV . 0 24 hm5C_associated_SNPs_70111 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:70260684-70260720
64251 chr15 81295598 81295598 1 + C T CESC 81295596 + 81295576 81295616 41 CACAGGGAGAGGCTGAGGAACTCGGCCTGCGCCGTGTCTGA CACAGGGAGAGGCTGAGGAACTTGGCCTGCGCCGTGTCTGA < 41bp 0.738361353372535 0.499649580805098 0.39136928 0.37154347 prediction 0.476722706745071 Functional Loss - TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81295596 chr15:81295598 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_70112 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:81295593-81295641
64251 chr6 28056954 28056954 1 + T C GBM 28056953 + 28056933 28056973 41 TGCAGAGAGCTCAGATCTTACTAGACATCGGCGAATTCACA TGCAGAGAGCTCAGATCTTACCAGACATCGGCGAATTCACA < 41bp 0.738359857342688 0.496692241335256 0.23801073 0.38732654 prediction 0.476719714685376 Functional Loss - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28056953 chr6:28056954 synonymous SNV . 0 22 hm5C_associated_SNPs_70115 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:28056951-28056975
64251 chr22 50647059 50647059 1 + G A UCEC 50647056 + 50647036 50647076 41 ACGACATTCGAGTGCAGCTGCTCGACTATGTCATCAGCTCC ACGACATTCGAGTGCAGCTGCTCAACTATGTCATCAGCTCC < 41bp 0.755239527170723 0.516885086815022 0.26219368 0.19326079 prediction 0.476708880711402 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50647056 chr22:50647059 unknown 0.128 1 24 hm5C_associated_SNPs_70117 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:50647050-50647068
64251 chr7 102040047 102040047 1 + C T SKCM 102040045 + 102040025 102040065 41 TCCACGTGTACAGACATCTGCGCCGGAGAGAATATCAGCGA TCCACGTGTACAGACATCTGCGTCGGAGAGAATATCAGCGA < 41bp 0.738340391034199 0.457127822649593 0.35615945 0.26067728 prediction 0.476680782068398 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102040045 chr7:102040047 synonymous SNV . 0 23 hm5C_associated_SNPs_70119 0 0 16 NOP58 POSTAR2 GSE43666,GSM1067862 chr7:102040032-102040070
64251 chrX 64955264 64955264 1 + G T DLBC 64955261 + 64955241 64955281 41 AGCAGATGAAGGCACAGGCCCGGGAGGAGAAGCACCAGAAG AGCAGATGAAGGCACAGGCCCGGTAGGAGAAGCACCAGAAG < 41bp 0.925300282268562 0.686966949074301 0.89289975 0.39386332 prediction 0.476666666388523 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64955261 chrX:64955264 stopgain 1.000 1 24 hm5C_associated_SNPs_70123 0 0 4 FMR1 POSTAR2 ENCODE chrX:64955142-64955273
64251 chr16 29819329 29819329 1 + G C rs570400729 29819328 + 29819308 29819348 41 AGCAAGGGGTGGTCCTTTGTCGAGGAGGTGGGCCTTGGGGT AGCAAGGGGTGGTCCTTTGTCCAGGAGGTGGGCCTTGGGGT < 41bp 0.80996508533811 0.571636138197366 0.9377998 0.907218 prediction 0.476657894281489 Functional Loss - MAZ ENSG00000103495 UTR5 Human protein_coding chr16:29819328 chr16:29819329 . . 0 22 hm5C_associated_SNPs_70125 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:29819329-29819330
64251 chr19 50285818 50285818 1 + T C COAD 50285817 + 50285797 50285837 41 TTCATTTCTGTGCTGGTGAACTCGAACTCGGAGCTGATCCG TTCATTTCTGTGCTGGTGAACCCGAACTCGGAGCTGATCCG < 41bp 0.738322291509628 0.482407763841364 0.44997504 0.25049326 prediction 0.476644583019255 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285817 chr19:50285818 nonsynonymous SNV 0.849 4 22 hm5C_associated_SNPs_70127 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:50285797-50285839
64251 chr16 89212437 89212437 1 + G T LUAD 89212434 + 89212414 89212454 41 GAAGGACACTCACTGTCCCACAGGGAGCTCAAAGAGTGGGC GAAGGACACTCACTGTCCCACAGTGAGCTCAAAGAGTGGGC < 41bp 0.738313061395538 0.339942633775861 0.44528806 0.037231565 prediction 0.476626122791076 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89212434 chr16:89212437 nonsynonymous SNV 0.738 0 24 hm5C_associated_SNPs_70136 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89212421-89212447
64251 chr2 70015272 70015272 1 + C T UCEC 70015270 + 70015250 70015290 41 TGAGGAAGGCCATGAAAGGGCTCGGTATGTGTCCTGCTGGA TGAGGAAGGCCATGAAAGGGCTTGGTATGTGTCCTGCTGGA < 41bp 0.753739738058698 0.515435160427671 0.13584256 0.11400959 prediction 0.476609155262054 Functional Loss - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70015270 chr2:70015272 synonymous SNV . 0 23 hm5C_associated_SNPs_70143 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:70015264-70015285
64251 chr12 12871794 12871794 1 + G T BLCA 12871792 + 12871772 12871812 41 AAACAAAAGAGCCAACAGAACAGAAGAAAATGTTTCAGACG AAACAAAAGAGCCAACAGAACATAAGAAAATGTTTCAGACG < 41bp 0.738287140119442 0.401560099252965 0.8885798 0.14917871 prediction 0.476574280238883 Functional Loss - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12871792 chr12:12871794 stopgain 1.000 0 23 hm5C_associated_SNPs_70149 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:12871792-12871830
64251 chr16 842508 842508 1 + G T rs34595992 842506 + 842486 842526 41 GGAGGTGGGGCCACAGGGCCCGGCTGTGCCTTCGGGAGGCG GGAGGTGGGGCCACAGGGCCCGTCTGTGCCTTCGGGAGGCG < 41bp 0.738285376384956 0.39432863207456 0.36000672 0.069074124 prediction 0.476570752769911 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842506 chr16:842508 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_70150 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr11 63967673 63967673 1 + G T COAD 63967671 + 63967651 63967691 41 CCAGGCCATGAAGCATTATACAGAAGCCATCAAAAGGAACC CCAGGCCATGAAGCATTATACATAAGCCATCAAAAGGAACC < 41bp 0.738283601489599 0.38783003680858 0.61820626 0.053887248 prediction 0.476567202979198 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63967671 chr11:63967673 stopgain 1.000 1 23 hm5C_associated_SNPs_70153 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:63967640-63967680
64251 chr4 151504557 151504557 1 + C T UCEC 151504555 + 151504535 151504575 41 GGCGTCGGGCTATCTCTCAGCGCGTAAGATCCGCTCGCGTT GGCGTCGGGCTATCTCTCAGCGTGTAAGATCCGCTCGCGTT < 41bp 0.753562743787974 0.515284278257415 0.6200587 0.5600096 prediction 0.476556931061118 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504555 chr4:151504557 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_70160 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr4:151504524-151504567
64251 chr1 161722969 161722969 1 + G A STAD 161722966 + 161722946 161722986 41 ACCATCTTCCATGCTTACCACAGGGAGGCAAGCTCAATGTA ACCATCTTCCATGCTTACCACAGAGAGGCAAGCTCAATGTA < 41bp 0.748322050007161 0.510048407740444 0.6766081 0.2248905 prediction 0.476547284533434 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161722966 chr1:161722969 nonsynonymous SNV 0.709 0 24 hm5C_associated_SNPs_70165 0 0 2 GRWD1 POSTAR2 ENCODE chr1:161722945-161722988
64251 chr19 48229168 48229168 1 + C T BLCA 48229166 + 48229146 48229186 41 CTGGAGATCTCGGACGAGTTCTCAGAGGCCATCGGCGCGTT CTGGAGATCTCGGACGAGTTCTTAGAGGCCATCGGCGCGTT < 41bp 0.738272814718373 0.458648657982953 0.22570106 0.2523495 prediction 0.476545629436745 Functional Loss - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48229166 chr19:48229168 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_70166 0 0 1 RPS3 POSTAR2 ENCODE chr19:48229068-48229186
64251 chr12 122248120 122248120 1 + C T COAD 122248118 + 122248098 122248138 41 CCACAGCCGCTTTTGGGGCCCGCGACAGTGGGGAGTTCCGG CCACAGCCGCTTTTGGGGCCCGTGACAGTGGGGAGTTCCGG < 41bp 0.738269882262886 0.483513515944943 0.6627375 0.4100959 prediction 0.476539764525773 Functional Loss - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122248118 chr12:122248120 synonymous SNV . 0 23 hm5C_associated_SNPs_70169 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:122248100-122248120
64251 chr3 183887822 183887822 1 + C T UCEC 183887820 + 183887800 183887840 41 CCAACCTGTCTCTCCACGATCACGATGGCTCCAGTGGCGCC CCAACCTGTCTCTCCACGATCATGATGGCTCCAGTGGCGCC < 41bp 0.831605289610507 0.593348414983634 0.85588443 0.9241102 prediction 0.476513749253747 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183887820 chr3:183887822 synonymous SNV . 0 23 hm5C_associated_SNPs_70176 0 0 1 PRPF8 POSTAR2 ENCODE chr3:183887769-183887831
64251 chr22 37962412 37962412 1 + C T CESC 37962410 + 37962390 37962430 41 ACCATGAGCCTGGGCAAGCTCTCGCCTGTGGGCTGGGTGTC ACCATGAGCCTGGGCAAGCTCTTGCCTGTGGGCTGGGTGTC < 41bp 0.803107709676034 0.564852413434428 0.17404613 0.14282984 prediction 0.476510592483211 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962410 chr22:37962412 nonsynonymous SNV 0.953 1 23 hm5C_associated_SNPs_70177 0 0 2 DDX3X POSTAR2 ENCODE chr22:37962412-37962435
64251 chr4 108911132 108911132 1 + C T BLCA 108911130 + 108911110 108911150 41 TTCATGCGTTCCGTGTCCTCCTCGTCCACCGCCTCGGCCTC TTCATGCGTTCCGTGTCCTCCTTGTCCACCGCCTCGGCCTC < 41bp 0.738251749750659 0.493122719712726 0.3353658 0.2098814 prediction 0.476503499501317 Functional Loss - HADH ENSG00000138796 CDS Human protein_coding chr4:108911130 chr4:108911132 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_70180 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:108911113-108911143
64251 chr16 28912091 28912091 1 + G A ESCA 28912088 + 28912068 28912108 41 AGAACGAGGAGGTGGCCGATCGCGCCTACACGGGCCGAGAG AGAACGAGGAGGTGGCCGATCGCACCTACACGGGCCGAGAG < 41bp 0.780185606251789 0.541936036305168 0.85107416 0.43328747 prediction 0.476499139893242 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28912088 chr16:28912091 nonsynonymous SNV 0.849 3 24 hm5C_associated_SNPs_70182 0 0 1 GRWD1 POSTAR2 ENCODE chr16:28912070-28912092
64251 chrX 154306899 154306899 1 + T C GBM 154306898 + 154306878 154306918 41 TTGACAGACACACAGGTTGGCTGAACTGACAGGCCGCCCCA TTGACAGACACACAGGTTGGCCGAACTGACAGGCCGCCCCA < 41bp 0.738860026442414 0.500613812104786 0.2702266 0.2847658 prediction 0.476492428675256 Functional Loss - BRCC3 ENSG00000185515 CDS Human protein_coding chrX:154306898 chrX:154306899 synonymous SNV . 0 22 hm5C_associated_SNPs_70183 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:154306888-154306900
64251 chr7 157046743 157046743 1 + G A UCEC 157046740 + 157046720 157046760 41 GTGGCAGACTACAGGCTGAACAGGCAGATCCGCCAGCACTG GTGGCAGACTACAGGCTGAACAGACAGATCCGCCAGCACTG < 41bp 0.738238403799271 0.489650916683053 0.7998879 0.38732594 prediction 0.476476807598542 Functional Loss - UBE3C ENSG00000009335 CDS Human protein_coding chr7:157046740 chr7:157046743 synonymous SNV . 0 24 hm5C_associated_SNPs_70185 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:157046696-157046749
64251 chr8 23423746 23423746 1 + G A LUAD 23423743 + 23423723 23423763 41 CGAGGCGTCAACGTCATGATCATGGGTGCAGGGCCGGCCCA CGAGGCGTCAACGTCATGATCATAGGTGCAGGGCCGGCCCA < 41bp 0.760237422827116 0.522002636498793 0.93265235 0.9252664 prediction 0.476469572656645 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23423743 chr8:23423746 nonsynonymous SNV 0.950 1 24 hm5C_associated_SNPs_70189 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:23423731-23423751
64251 chr14 103059661 103059661 1 + C T SARC 103059659 + 103059639 103059679 41 CGGTGGTGCCCGACTTCGACCCCGGTGAGTAGCGGCCCCGG CGGTGGTGCCCGACTTCGACCCTGGTGAGTAGCGGCCCCGG < 41bp 0.763529222357484 0.52529498322713 0.19237232 0.19779712 prediction 0.476468478260708 Functional Loss - RCOR1 ENSG00000089902 CDS Human protein_coding chr14:103059659 chr14:103059661 synonymous SNV . 0 23 hm5C_associated_SNPs_70190 0 0 2 BUD13 POSTAR2 ENCODE chr14:103059587-103059665
64251 chr22 29704232 29704232 1 + C T SKCM 29704230 + 29704210 29704250 41 GCCTTGTACGGCCTGGGTCTCCCGGGTGGTGGCGATGGCTT GCCTTGTACGGCCTGGGTCTCCTGGGTGGTGGCGATGGCTT < 41bp 0.746408215097499 0.508178242137311 0.873745 0.6500279 prediction 0.476459945920376 Functional Loss - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29704230 chr22:29704232 nonsynonymous SNV 0.563 1 23 hm5C_associated_SNPs_70191 0 0 1 DDX3X POSTAR2 ENCODE chr22:29704207-29704277
64251 chr9 139840549 139840549 1 + G A BLCA 139840546 + 139840526 139840566 41 CTCTGCCCCAGCCCGAGACGCCCGAGGGGCTGTGCACGTGG CTCTGCCCCAGCCCGAGACGCCCAAGGGGCTGTGCACGTGG < 41bp 0.770057151217241 0.531828444250704 0.1537632 0.07861683 prediction 0.476457413933076 Functional Loss - C8G ENSG00000176919 CDS Human protein_coding chr9:139840546 chr9:139840549 nonsynonymous SNV 0.017 1 24 hm5C_associated_SNPs_70192 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:139840471-139840552
64251 chr12 13066051 13066051 1 + G C rs16908517 13066047 + 13066027 13066067 41 TTTTGTGAGGCTCTGTGGCCCAGAGCAGACCTGCATATCTG TTTTGTGAGGCTCTGTGGCCCAGACCAGACCTGCATATCTG < 41bp 0.738227756576588 0.447684488512584 0.36627585 0.07296181 prediction 0.476455513153176 Functional Loss - GPRC5A ENSG00000013588 UTR3 Human protein_coding chr12:13066047 chr12:13066051 . . 0 25 hm5C_associated_SNPs_70193 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:13066000-13066080
64251 chr9 99227685 99227685 1 + C T rs34274515 99227683 + 99227663 99227703 41 GAGGCCCGAGAGGGGGTATGCGCGGCAGAGGCAGAGGTGGC GAGGCCCGAGAGGGGGTATGCGTGGCAGAGGCAGAGGTGGC < 41bp 0.823201213558224 0.584988537167875 0.8177776 0.8097473 prediction 0.476425352780698 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99227683 chr9:99227685 synonymous SNV . 0 23 hm5C_associated_SNPs_70203 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:99227621-99227738
64251 chr7 148895722 148895722 1 + G T UCS 148895719 + 148895699 148895739 41 TGGAGAGCAAGTGGGCCGTGCTGGGGACCCTGCTGCAGGAG TGGAGAGCAAGTGGGCCGTGCTGTGGACCCTGCTGCAGGAG < 41bp 0.738212489919977 0.334896624484019 0.88998026 0.3328101 prediction 0.476424979839955 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148895719 chr7:148895722 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_70204 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:148895701-148895743
64251 chrX 21874671 21874671 1 + C T UCEC 21874669 + 21874649 21874689 41 CGGCAGATATTGTGGAGCTCCACGACATCAATGTGGAGCCC CGGCAGATATTGTGGAGCTCCATGACATCAATGTGGAGCCC < 41bp 0.738204066134688 0.476525583555529 0.23798773 0.35395187 prediction 0.476408132269377 Functional Loss - YY2 ENSG00000230797 CDS Human protein_coding chrX:21874669 chrX:21874671 synonymous SNV . 0 23 hm5C_associated_SNPs_70209 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:21874654-21874672
64251 chr19 55857947 55857947 1 + G A CESC 55857944 + 55857924 55857964 41 CCCTGGACAAGTACCAGCTGCGTGAGACCAAGCGGCGGCTG CCCTGGACAAGTACCAGCTGCGTAAGACCAAGCGGCGGCTG < 41bp 0.75013563934808 0.511940789540861 0.8139764 0.45103288 prediction 0.476389699614438 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857944 chr19:55857947 nonsynonymous SNV 0.927 2 24 hm5C_associated_SNPs_70212 0 0 3 BUD13 POSTAR2 ENCODE chr19:55857867-55857972
64251 chr5 53815305 53815305 1 + C T HNSC 53815303 + 53815283 53815323 41 GACGCCATTGGCGAGCTCTTCGCGGAGCAGCCCAGGCAGGA GACGCCATTGGCGAGCTCTTCGTGGAGCAGCCCAGGCAGGA < 41bp 0.788375527318806 0.550184928554448 0.8969135 0.7817892 prediction 0.476381197528716 Functional Loss - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815303 chr5:53815305 nonsynonymous SNV 0.963 4 23 hm5C_associated_SNPs_70214 0 0 1 RBM15 POSTAR2 ENCODE chr5:53815284-53815338
64251 chr21 42729091 42729091 1 + G A LGG 42729088 + 42729068 42729108 41 TCTGGCTGGCCTGCAGAGATCCAGATAGAAGGCTGCATACC TCTGGCTGGCCTGCAGAGATCCAAATAGAAGGCTGCATACC < 41bp 0.75405344790007 0.515868909755503 0.87127686 0.40552306 prediction 0.476369076289133 Functional Loss - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42729088 chr21:42729091 synonymous SNV . 0 24 hm5C_associated_SNPs_70216 0 0 1 BUD13 POSTAR2 ENCODE chr21:42729028-42729136
64251 chr8 59352269 59352269 1 + A C COAD 59352265 + 59352245 59352285 41 ATATGGAGGATCATCAGGATCAAGAATACATAAAACCTAGA ATATGGAGGATCATCAGGATCAAGCATACATAAAACCTAGA < 41bp 0.738181446603923 0.324039083408481 0.14449024 0.114480525 prediction 0.476362893207847 Functional Loss - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59352265 chr8:59352269 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_70218 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:59352232-59352273
64251 chr17 8159677 8159677 1 + A C rs371281535 8159676 + 8159656 8159696 41 TTGAGTCCATCATGAGCACCCAGGAATCCTCGAACCCCAAC TTGAGTCCATCATGAGCACCCCGGAATCCTCGAACCCCAAC < 41bp 0.809055063420982 0.570874742984588 0.35611832 0.09617701 prediction 0.476360640872788 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8159676 chr17:8159677 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_70221 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:8159652-8159719
64251 chr2 96933158 96933158 1 + G T SARC 96933156 + 96933136 96933176 41 GGTAATTACCTGGCCTCTGCCAGCTTTGATGCTACCACTTG GGTAATTACCTGGCCTCTGCCATCTTTGATGCTACCACTTG < 41bp 0.738179544139281 0.39518488086055 0.86219025 0.28150558 prediction 0.476359088278562 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96933156 chr2:96933158 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_70222 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:96933128-96933203
64251 chr2 71357836 71357836 1 + G C OV 71357832 + 71357812 71357852 41 GGCGTCGACGGACCCTGGAGCGGTGTCTGACGGAAGTCGGC GGCGTCGACGGACCCTGGAGCGGTCTCTGACGGAAGTCGGC < 41bp 0.738176796300588 0.44651088018672 0.40417427 0.26318017 prediction 0.476353592601177 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71357832 chr2:71357836 nonsynonymous SNV 0.498 4 25 hm5C_associated_SNPs_70223 0 0 12 DDX3X POSTAR2 ENCODE chr2:71357761-71357882
64251 chr19 1046354 1046354 1 + G A COAD 1046351 + 1046331 1046371 41 CGTGCTCAGCGGCGCCAACCCCCGGGCCGGCCTCTACCTGC CGTGCTCAGCGGCGCCAACCCCCAGGCCGGCCTCTACCTGC < 41bp 0.76528403249845 0.527108138460726 0.8268415 0.3756317 prediction 0.476351788075447 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1046351 chr19:1046354 nonsynonymous SNV 0.020 1 24 hm5C_associated_SNPs_70224 0 0 1 SUB1 POSTAR2 ENCODE chr19:1046342-1046379
64251 chr3 32860416 32860416 1 + G A GBM 32860413 + 32860393 32860433 41 GCCTCGGCTTCTGCCAGCACCACGACGACGAGGTGAGTGCG GCCTCGGCTTCTGCCAGCACCACAACGACGAGGTGAGTGCG < 41bp 0.753407508982044 0.515232667837354 0.340429 0.33079123 prediction 0.476349682289378 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32860413 chr3:32860416 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_70225 0 0 1 RBM15 POSTAR2 ENCODE chr3:32860350-32860421
64251 chr1 45116466 45116466 1 + G A rs374199001 45116463 + 45116443 45116483 41 TGTGAGCTATCTGCCCCAGGCAGGCCTCGCCTCCAGCAGCC TGTGAGCTATCTGCCCCAGGCAGACCTCGCCTCCAGCAGCC < 41bp 0.738170782484663 0.498313659057313 0.3937551 0.23855665 prediction 0.476341564969326 Functional Loss - RNF220 ENSG00000187147 UTR3 Human protein_coding chr1:45116463 chr1:45116466 . . 0 24 hm5C_associated_SNPs_70227 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:45116466-45116467
64251 chr19 47856634 47856634 1 + G A UCEC 47856631 + 47856611 47856651 41 CTCTGTTCTTGGCCCTGCCACGCGGGGCTCTCAGGGACTGG CTCTGTTCTTGGCCCTGCCACGCAGGGCTCTCAGGGACTGG < 41bp 0.797204343326538 0.559033880540517 0.4392296 0.16895396 prediction 0.476340925572042 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856631 chr19:47856634 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_70228 0 0 2 RBM15 POSTAR2 ENCODE chr19:47856609-47856668
64251 chr16 28507475 28507475 1 + G A LUSC 28507472 + 28507452 28507492 41 GGGACAGCCTCAGGAGGGGACGAGGCCTGGACAACCTCAGG GGGACAGCCTCAGGAGGGGACGAAGCCTGGACAACCTCAGG < 41bp 0.738170185836172 0.494569799554322 0.6757252 0.26031512 prediction 0.476340371672345 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507472 chr16:28507475 synonymous SNV . 0 24 hm5C_associated_SNPs_70229 0 0 2 GEMIN5 POSTAR2 ENCODE chr16:28507443-28507497
64251 chr11 118502965 118502965 1 + G T PAAD 118502963 + 118502943 118502983 41 AGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTG AGAAGGCAGTGGATCAGCTGCATGAGAAGCTGGTGGCCTTG < 41bp 0.738164380210318 0.406948793520955 0.89239377 0.39149168 prediction 0.476328760420636 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118502963 chr11:118502965 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_70234 0 0 4 BUD13 POSTAR2 ENCODE chr11:118502959-118503026
64251 chr2 242757862 242757862 1 + G A SKCM 242757859 + 242757839 242757879 41 CACTCCTCGGTCCTGGAGTCCACGAACCCCCAGAGGAGGCT CACTCCTCGGTCCTGGAGTCCACAAACCCCCAGAGGAGGCT < 41bp 0.752155895739152 0.514005481246951 0.2523959 0.25408047 prediction 0.476300828984401 Functional Loss - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242757859 chr2:242757862 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_70238 0 0 1 LARP4 POSTAR2 ENCODE chr2:242757828-242757866
64251 chr13 88329046 88329046 1 + G T LUAD 88329044 + 88329024 88329064 41 CGCCTCTACCTGAATGGCAACAGGATCGAGAGGCTGAGCCC CGCCTCTACCTGAATGGCAACATGATCGAGAGGCTGAGCCC < 41bp 0.898375643498248 0.660226727430058 0.7000096 0.032131374 prediction 0.476297832136381 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329044 chr13:88329046 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_70240 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr13:88329044-88329067
64251 chr1 29644387 29644387 1 + C T SKCM 29644385 + 29644365 29644405 41 CGCTGCCTGCCCTTCCTCATCTCCACTGATGGGGACTCCAA CGCTGCCTGCCCTTCCTCATCTTCACTGATGGGGACTCCAA < 41bp 0.738147560815705 0.441600748799643 0.9624258 0.5972718 prediction 0.47629512163141 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29644385 chr1:29644387 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_70241 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:29644369-29644392
64251 chr1 43161895 43161895 1 + G T UCEC 43161893 + 43161873 43161913 41 GCCATAAAGAAGAATAACCCCAGGAAGTACCTTCGCAGTGT GCCATAAAGAAGAATAACCCCATGAAGTACCTTCGCAGTGT < 41bp 0.880239313890385 0.642094938335327 0.6416646 0.12885419 prediction 0.476288751110116 Functional Loss - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43161893 chr1:43161895 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_70242 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:43161861-43161897
64251 chr1 212506884 212506884 1 + G T UCEC 212506881 + 212506861 212506901 41 CACTTCCTCCAAGTGATAATCCAGATTTTGATCCAGAAGAG CACTTCCTCCAAGTGATAATCCATATTTTGATCCAGAAGAG < 41bp 0.738136006503423 0.348364647384843 0.16854984 0.15431345 prediction 0.476272013006845 Functional Loss - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212506881 chr1:212506884 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_70243 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:212506865-212506892
64251 chr8 11644273 11644273 1 + A C rs8191671 11644269 + 11644249 11644289 41 AGCAGTCTTCATCTCAGCCTCCAGAGTAGCTGGGACTACAG AGCAGTCTTCATCTCAGCCTCCAGCGTAGCTGGGACTACAG < 41bp 0.738130873934833 0.363208334577461 0.756851 0.31056494 prediction 0.476261747869666 Functional Loss - NEIL2 ENSG00000154328 UTR3 Human protein_coding chr8:11644269 chr8:11644273 . . 0 25 hm5C_associated_SNPs_70246 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:11644272-11644317
64251 chr2 47238519 47238519 1 + C T rs114202807 47238517 + 47238497 47238537 41 GAGTGTGTGAAGTTGCGGCCCTCGGACCCCACCGTGCCCCT GAGTGTGTGAAGTTGCGGCCCTTGGACCCCACCGTGCCCCT < 41bp 0.810123892411043 0.571998198022338 0.1469461 0.078692704 prediction 0.476251388777411 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47238517 chr2:47238519 nonsynonymous SNV 0.952 1 23 hm5C_associated_SNPs_70248 0 0 1 PPIG POSTAR2 ENCODE chr2:47238500-47238581
64251 chr3 150127342 150127342 1 + G C CESC 150127341 + 150127321 150127361 41 GTCTGCGAGCGCAGCTCTTCCGAAGAGACGCTTAACAATGT GTCTGCGAGCGCAGCTCTTCCCAAGAGACGCTTAACAATGT < 41bp 0.738124992121092 0.424187628619034 0.6696124 0.43386734 prediction 0.476249984242184 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127341 chr3:150127342 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_70249 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:150127333-150127371
64251 chr1 10132131 10132131 1 + C T BLCA 10132129 + 10132109 10132149 41 ACTTGCTGGTGGACAGACCTCTCAGCCAACCACCCCACTCA ACTTGCTGGTGGACAGACCTCTTAGCCAACCACCCCACTCA < 41bp 0.738121273472733 0.466310538850748 0.12799913 0.10220632 prediction 0.476242546945466 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10132129 chr1:10132131 stopgain 0.995 1 23 hm5C_associated_SNPs_70253 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:10132120-10132159
64251 chr1 26570718 26570718 1 + G T COAD 26570715 + 26570695 26570735 41 GAATGGCAGACCCCAGTTATCTCGGAGCCCTTTCGGAGCCG GAATGGCAGACCCCAGTTATCTCTGAGCCCTTTCGGAGCCG < 41bp 0.921815674905992 0.683705035104168 0.83189875 0.41345155 prediction 0.476221279603648 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26570715 chr1:26570718 synonymous SNV . 0 24 hm5C_associated_SNPs_70259 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:26570703-26570721
64251 chr20 54974361 54974361 1 + T C rs150127192 54974360 + 54974340 54974380 41 TCTCTCAAGTGGAAAAGACTCTGTAGCTAAACTTTGGGAAA TCTCTCAAGTGGAAAAGACTCCGTAGCTAAACTTTGGGAAA < 41bp 0.756793984802473 0.518683727748412 0.10072446 0.051097095 prediction 0.476220514108121 Functional Loss - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54974360 chr20:54974361 synonymous SNV . 0 22 hm5C_associated_SNPs_70260 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:54974335-54974373
64251 chr10 103348155 103348155 1 + A C rs3730458 103348151 + 103348131 103348171 41 CCCAGAAGACTGCGCTGCTGCAGGACGGTAACTCGAGGGTC CCCAGAAGACTGCGCTGCTGCAGGCCGGTAACTCGAGGGTC < 41bp 0.919433052983768 0.681323945593472 0.61555487 0.54161644 prediction 0.476218214780592 Functional Loss - DPCD ENSG00000166171 CDS Human protein_coding chr10:103348151 chr10:103348155 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_70261 0 0 1 NCBP2 POSTAR2 ENCODE chr10:103348084-103348159
64251 chr16 1825652 1825652 1 + C T UCEC 1825650 + 1825630 1825670 41 GAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGC GAGCTGAGTCGGCACGTGTGCGTCGTTACCAAGGCTCTCGC < 41bp 0.776045863480732 0.537945706794887 0.12128219 0.088614345 prediction 0.476200313371691 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825650 chr16:1825652 nonsynonymous SNV 0.014 3 23 hm5C_associated_SNPs_70264 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr16:1825645-1825669
64251 chr9 131476511 131476511 1 + G A rs73669966 131476508 + 131476488 131476528 41 TGAGGGCTTCGCAGATGAACCTCGGCATGGCGGCCTGGGGG TGAGGGCTTCGCAGATGAACCTCAGCATGGCGGCCTGGGGG < 41bp 0.766660892106536 0.528563031741383 0.5863924 0.18372682 prediction 0.476195720730305 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131476508 chr9:131476511 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_70267 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr9:131476493-131476511
64251 chr1 179045032 179045032 1 + A T rs192735944 179045028 + 179045008 179045048 41 ACACCTCAATGATGGTAAAACAGCATCATCAGTAAGCTATC ACACCTCAATGATGGTAAAACAGCTTCATCAGTAAGCTATC < 41bp 0.73809664049025 0.478022102650422 0.103440166 0.0895178 prediction 0.476193280980499 Functional Loss - FAM20B ENSG00000116199 UTR3 Human protein_coding chr1:179045028 chr1:179045032 . . 0 25 hm5C_associated_SNPs_70269 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:179045004-179045037
64251 chr3 38411551 38411551 1 + T C GBM 38411550 + 38411530 38411570 41 TTTCCTTCCTTCCTCAGGTTCTGGAATGAATTTGTTGCAGA TTTCCTTCCTTCCTCAGGTTCCGGAATGAATTTGTTGCAGA < 41bp 0.749571158547429 0.511482655525472 0.2605221 0.124358535 prediction 0.476177006043914 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38411550 chr3:38411551 synonymous SNV . 0 22 hm5C_associated_SNPs_70272 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr3:38411512-38411557
64251 chr22 29704233 29704233 1 + G A SKCM 29704230 + 29704210 29704250 41 GCCTTGTACGGCCTGGGTCTCCCGGGTGGTGGCGATGGCTT GCCTTGTACGGCCTGGGTCTCCCAGGTGGTGGCGATGGCTT < 41bp 0.746408215097499 0.508322871881211 0.873745 0.39981028 prediction 0.476170686432575 Functional Loss - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29704230 chr22:29704233 synonymous SNV . 0 24 hm5C_associated_SNPs_70273 0 0 1 DDX3X POSTAR2 ENCODE chr22:29704207-29704277
64251 chr12 3121375 3121375 1 + C T SKCM 3121373 + 3121353 3121393 41 GGTGCTGGCTCGTCGCAAAGCTCGCGAGATCCAGGCCAAGC GGTGCTGGCTCGTCGCAAAGCTTGCGAGATCCAGGCCAAGC < 41bp 0.738083241621283 0.467850895469173 0.014261574 0.0072211325 prediction 0.476166483242567 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3121373 chr12:3121375 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_70275 0 0 1 PRPF8 POSTAR2 ENCODE chr12:3121358-3121427
64251 chr19 49632191 49632191 1 + G A LUSC 49632188 + 49632168 49632208 41 GTGAAGCGCCAGGCCCAGTCCCCGGGTGGGGTCTCCTCGGA GTGAAGCGCCAGGCCCAGTCCCCAGGTGGGGTCTCCTCGGA < 41bp 0.738080738493751 0.492444517620101 0.58969 0.3086545 prediction 0.476161476987502 Functional Loss - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49632188 chr19:49632191 synonymous SNV . 0 24 hm5C_associated_SNPs_70276 0 0 1 GRWD1 POSTAR2 ENCODE chr19:49632102-49632198
64251 chrX 117895177 117895177 1 + G T UCEC 117895175 + 117895155 117895195 41 ATGTGCAATGGGAGAATCCACAGAATTTTATTAGCAGATGC ATGTGCAATGGGAGAATCCACATAATTTTATTAGCAGATGC < 41bp 0.738070434577842 0.406429804810381 0.18088129 0.10827571 prediction 0.476140869155683 Functional Loss - IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117895175 chrX:117895177 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_70283 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:117895177-117895220
64251 chr3 53883706 53883706 1 + A C CESC 53883705 + 53883685 53883725 41 CATCTCCAGAGTGGATGCTACAACATGATCTAATCCCCGGA CATCTCCAGAGTGGATGCTACCACATGATCTAATCCCCGGA < 41bp 0.784631134876291 0.54657475020827 0.107929826 0.37588412 prediction 0.476112769336041 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53883705 chr3:53883706 nonsynonymous SNV 0.022 0 22 hm5C_associated_SNPs_70285 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:53883688-53883715
64251 chr2 33172411 33172411 1 + G C rs541957559 33172407 + 33172387 33172427 41 CCGCGATGGCGGGGGCCTGGCTCAGGTGGGGGCTCCTGCTC CCGCGATGGCGGGGGCCTGGCTCACGTGGGGGCTCCTGCTC < 41bp 0.785138112046034 0.547082024922758 0.8944485 0.6072136 prediction 0.476112174246553 Functional Loss - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33172407 chr2:33172411 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_70286 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:33172410-33172411
64251 chr12 133732744 133732744 1 + G T LUAD 133732741 + 133732721 133732761 41 GAATGTGGAAAGTCTTTCAGCCGGAGTTCTCACCTCATTGG GAATGTGGAAAGTCTTTCAGCCGTAGTTCTCACCTCATTGG < 41bp 0.738043949182121 0.346746146484002 0.34009445 0.07233274 prediction 0.476087898364243 Functional Loss - ZNF10 ENSG00000256223 CDS Human protein_coding chr12:133732741 chr12:133732744 synonymous SNV . 0 24 hm5C_associated_SNPs_70289 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr12:133732737-133732757
64251 chr9 132569490 132569490 1 + C T rs138707572 132569488 + 132569468 132569508 41 ACCAGTTACAGAAGTGGATCCGCGGTAATGTGAGTGCATGT ACCAGTTACAGAAGTGGATCCGTGGTAATGTGAGTGCATGT < 41bp 0.73804359289931 0.463174658324938 0.31547588 0.29775137 prediction 0.47608718579862 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132569488 chr9:132569490 synonymous SNV . 0 23 hm5C_associated_SNPs_70290 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:132569478-132569497
64251 chr16 46943813 46943813 1 + G T GBM 46943811 + 46943791 46943831 41 CACTGTGATCCTAAGGTGCTCTGCATAATCAACCCTGGGAA CACTGTGATCCTAAGGTGCTCTTCATAATCAACCCTGGGAA < 41bp 0.73804251676955 0.394666949890725 0.15901682 0.122811854 prediction 0.4760850335391 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46943811 chr16:46943813 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_70291 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:46943776-46943814
64251 chr3 32280178 32280178 1 + A C rs141871995 32280174 + 32280154 32280194 41 CCCCCTCCCCTCCTCCGGGCCTCCACCGCCTTCCCCGGCTG CCCCCTCCCCTCCTCCGGGCCTCCCCCGCCTTCCCCGGCTG < 41bp 0.738039928556479 0.380096090150158 0.93263996 0.13266075 prediction 0.476079857112957 Functional Loss - CMTM8 ENSG00000170293 UTR5 Human protein_coding chr3:32280174 chr3:32280178 . . 0 25 hm5C_associated_SNPs_70293 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:32280172-32280198
64251 chr1 48695050 48695050 1 + G T ESCA 48695048 + 48695028 48695068 41 TGGTCACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGC TGGTCACAATGCCGCAGTATCTTAAGAAGCGATTTGGGGGC < 41bp 0.871425523913548 0.633386698944016 0.31031078 0.20751816 prediction 0.476077649939064 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48695048 chr1:48695050 synonymous SNV . 0 23 hm5C_associated_SNPs_70295 0 0 1 UCHL5 POSTAR2 ENCODE chr1:48695012-48695057
64251 chr10 102748377 102748377 1 + G A COAD 102748374 + 102748354 102748394 41 GGAGGGGCGAGGGGATGGGGCCAGGGAGGGGTTTCTGCTTA GGAGGGGCGAGGGGATGGGGCCAAGGAGGGGTTTCTGCTTA < 41bp 0.771013011339831 0.532976226671677 0.90228105 0.88350177 prediction 0.476073569336308 Functional Loss - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748374 chr10:102748377 nonsynonymous SNV 0.007 1 24 hm5C_associated_SNPs_70296 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:102748373-102748390
64251 chr2 27322381 27322381 1 + C T STAD 27322379 + 27322359 27322399 41 CGGATGCTTTCCCGCCACCCCGCGTGGTGGATACACTGGGA CGGATGCTTTCCCGCCACCCCGTGTGGTGGATACACTGGGA < 41bp 0.809190426093843 0.571157254513833 0.41721004 0.38464168 prediction 0.47606634316002 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27322379 chr2:27322381 synonymous SNV . 0 23 hm5C_associated_SNPs_70298 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27322372-27322406
64251 chr6 43400684 43400684 1 + C T BLCA 43400682 + 43400662 43400702 41 AGGGGCAGGAGCCACTAAGCCACGGCCTGCTCTATGCTCTG AGGGGCAGGAGCCACTAAGCCATGGCCTGCTCTATGCTCTG < 41bp 0.763406475415978 0.525376285603856 0.61188126 0.42147315 prediction 0.476060379624242 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43400682 chr6:43400684 synonymous SNV . 0 23 hm5C_associated_SNPs_70300 0 0 2 RBM15 POSTAR2 ENCODE chr6:43400617-43400695
64251 chr12 9840661 9840661 1 + G T UCEC 9840659 + 9840639 9840679 41 CACAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAA CACAAGATGCTGATCTTGCTCATGTTGAAAGCTTCCAGGAA < 41bp 0.738025752248373 0.409049351116438 0.87423366 0.19586968 prediction 0.476051504496747 Functional Loss - CLEC2D ENSG00000069493 CDS Human protein_coding chr12:9840659 chr12:9840661 nonsynonymous SNV 0.057 0 23 hm5C_associated_SNPs_70307 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr12:9840642-9840683
64251 chr17 27371896 27371896 1 + G A LUSC 27371893 + 27371873 27371913 41 CCAGTTCTTTCTACCACACTCCCGAGGAAGCTCCCATGGAC CCAGTTCTTTCTACCACACTCCCAAGGAAGCTCCCATGGAC < 41bp 0.756240697544956 0.51821587523626 0.16442713 0.13907549 prediction 0.476049644617393 Functional Loss - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27371893 chr17:27371896 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_70308 0 0 4 GRWD1 POSTAR2 ENCODE chr17:27371876-27371939
64251 chr1 9784991 9784991 1 + C T CESC 9784989 + 9784969 9785009 41 GCTCCAAAGACATCCAGTATCTCAAGGTATGTGCCGGGCAG GCTCCAAAGACATCCAGTATCTTAAGGTATGTGCCGGGCAG < 41bp 0.820657935004848 0.582633258732512 0.42919415 0.30280313 prediction 0.476049352544672 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9784989 chr1:9784991 synonymous SNV . 0 23 hm5C_associated_SNPs_70309 0 0 3 PRPF8 POSTAR2 ENCODE chr1:9784989-9785036
64251 chr20 42089355 42089355 1 + G C HNSC 42089351 + 42089331 42089371 41 TTCCTTGTCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCAC TTCCTTGTCCAGTTCCAGGTCGCGCAGCAAAGGTCGATCAC < 41bp 0.816745586906079 0.5787227759589 0.38903514 0.31536227 prediction 0.476045621894357 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089351 chr20:42089355 synonymous SNV . 0 25 hm5C_associated_SNPs_70311 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:42089335-42089356
64251 chr9 135864570 135864570 1 + G A LUAD 135864567 + 135864547 135864587 41 GCTGTGAGCCTGGAGCAGCACACGCACGTCCACTCCCAGGT GCTGTGAGCCTGGAGCAGCACACACACGTCCACTCCCAGGT < 41bp 0.757315199340581 0.519293698686585 0.23009878 0.06252992 prediction 0.476043001307992 Functional Loss - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135864567 chr9:135864570 synonymous SNV . 0 24 hm5C_associated_SNPs_70312 0 0 1 BUD13 POSTAR2 ENCODE chr9:135864545-135864594
64251 chr7 65705728 65705728 1 + C T BRCA 65705726 + 65705706 65705746 41 AGAGGAAACCAGGGTCATTCCCCGAATCCTGGCCCTGAAGC AGAGGAAACCAGGGTCATTCCCTGAATCCTGGCCCTGAAGC < 41bp 0.838000590936451 0.599980728652421 0.27129596 0.15943697 prediction 0.476039724568061 Functional Loss - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705726 chr7:65705728 stopgain 1.000 1 23 hm5C_associated_SNPs_70313 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:65705696-65705749
64251 chr8 26481792 26481792 1 + G T UCEC 26481790 + 26481770 26481810 41 GTGAGTGGCATAAGGGCATCCAGGAGGAGATGGAAGCGCTT GTGAGTGGCATAAGGGCATCCATGAGGAGATGGAAGCGCTT < 41bp 0.896864514903997 0.658849580877693 0.4541794 0.124895036 prediction 0.476029868052609 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26481790 chr8:26481792 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_70315 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:26481790-26481805
64251 chr22 44322986 44322986 1 + G A LUSC 44322983 + 44322963 44323003 41 CAAAATAGGCATCTCTCTTACCAGAGTGTCTGATGGGGAAA CAAAATAGGCATCTCTCTTACCAAAGTGTCTGATGGGGAAA < 41bp 0.762684232531057 0.52467508897384 0.9009073 0.36071098 prediction 0.476018287114436 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44322983 chr22:44322986 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_70318 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:44322962-44322986
64251 chr15 41576234 41576234 1 + G T rs182275641 41576231 + 41576211 41576251 41 GCGAAGATGGCGGAGTAAGGCGTGCCGCTGCAAACTGGCCT GCGAAGATGGCGGAGTAAGGCGTTCCGCTGCAAACTGGCCT < 41bp 0.737996777830875 0.374843590945536 0.46977594 0.4012461 prediction 0.475993555661749 Functional Loss - OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41576231 chr15:41576234 . . 0 24 hm5C_associated_SNPs_70322 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41576227-41576254
64251 chr1 180243539 180243539 1 + C T STAD 180243537 + 180243517 180243557 41 TTGCTCAATGGGCTGGATTACACGGTGGACAGTAATTTGGG TTGCTCAATGGGCTGGATTACATGGTGGACAGTAATTTGGG < 41bp 0.807611653154614 0.569615378925226 0.39800566 0.4714057 prediction 0.475992548458777 Functional Loss - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180243537 chr1:180243539 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_70323 1 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:180243538-180243561
64251 chr16 31123565 31123565 1 + G A rs145180240 31123562 + 31123542 31123582 41 CGGCTCCGCCACATCGATGGCCGGGAGGAAAGCTTCCGGAT CGGCTCCGCCACATCGATGGCCGAGAGGAAAGCTTCCGGAT < 41bp 0.746117615674392 0.508123114644936 0.8948773 0.25898486 prediction 0.475989002058913 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31123562 chr16:31123565 synonymous SNV . 0 24 hm5C_associated_SNPs_70324 1 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:31123549-31123604
64251 chrX 15840963 15840963 1 + T C COAD 15840962 + 15840942 15840982 41 TAATAGAGACATCTACTTGTCTCCAGATCGGACTGGCTCCT TAATAGAGACATCTACTTGTCCCCAGATCGGACTGGCTCCT < 41bp 0.785757051119103 0.547773272569679 0.9119266 0.107114226 prediction 0.475967557098848 Functional Loss - ZRSR2 ENSG00000169249 CDS Human protein_coding chrX:15840962 chrX:15840963 synonymous SNV . 0 22 hm5C_associated_SNPs_70327 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:15840954-15840985
64251 chr3 152554233 152554233 1 + C T COAD 152554231 + 152554211 152554251 41 TATTTCATCTACAGCATGTGCACGACCGTGGCCATGTTCTG TATTTCATCTACAGCATGTGCATGACCGTGGCCATGTTCTG < 41bp 0.810719603878821 0.572738418186515 0.014053702 0.018586814 prediction 0.475962371384612 Functional Loss - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152554231 chr3:152554233 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_70328 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:152554223-152554235
64251 chr8 17132303 17132303 1 + C T PAAD 17132301 + 17132281 17132321 41 TCAGGGTTTTCCATTTCTTCCTCCATATCCTCCACAAGAAG TCAGGGTTTTCCATTTCTTCCTTCATATCCTCCACAAGAAG < 41bp 0.737980897796112 0.434745874385001 0.96008706 0.037569255 prediction 0.475961795592224 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17132301 chr8:17132303 nonsynonymous SNV 0.969 0 23 hm5C_associated_SNPs_70329 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:17132286-17132317
64251 chr20 43547571 43547571 1 + A C SARC 43547567 + 43547547 43547587 41 CTTTGTGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGG CTTTGTGGGTCACTTCAAGTCTCGCCGGGAGCGGGAGGCGG < 41bp 0.928162733406519 0.690187983381515 0.9206028 0.77332187 prediction 0.475949500050007 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547567 chr20:43547571 synonymous SNV . 0 25 hm5C_associated_SNPs_70331 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:43547547-43547575
64251 chr13 21751241 21751241 1 + C T BLCA 21751239 + 21751219 21751259 41 CCCGGGAGCAGGAGCGCGGCCACGCCGCGGTGCGCAGGAGG CCCGGGAGCAGGAGCGCGGCCATGCCGCGGTGCGCAGGAGG < 41bp 0.777277390320815 0.53930564455722 0.37673777 0.40780824 prediction 0.47594349152719 Functional Loss - MRPL57 ENSG00000173141 CDS Human protein_coding chr13:21751239 chr13:21751241 synonymous SNV . 0 23 hm5C_associated_SNPs_70332 0 0 8 DDX3X POSTAR2 ENCODE chr13:21751231-21751259
64251 chr2 172379144 172379144 1 + G T UCEC 172379142 + 172379122 172379162 41 TCGGTGATCTTCGCCCTCGTCTGGGTCCTCCACTACCGAGA TCGGTGATCTTCGCCCTCGTCTTGGTCCTCCACTACCGAGA < 41bp 0.896345925398835 0.65837738903352 0.9032819 0.21120358 prediction 0.475937072730629 Functional Loss - CYBRD1 ENSG00000071967 CDS Human protein_coding chr2:172379142 chr2:172379144 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_70334 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:172379106-172379148
64251 chr8 73921159 73921159 1 + G C LIHC 73921155 + 73921135 73921175 41 TTTCCTCAGCGGCCCCGAGCCCGCGGGGCTGTGCGGATGGT TTTCCTCAGCGGCCCCGAGCCCGCCGGGCTGTGCGGATGGT < 41bp 0.737957036187365 0.450432682825013 0.28381848 0.15123314 prediction 0.475914072374729 Functional Loss - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921155 chr8:73921159 nonsynonymous SNV 0.012 3 25 hm5C_associated_SNPs_70339 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr8:73921157-73921181
64251 chr13 111371692 111371692 1 + G A LUAD 111371689 + 111371669 111371709 41 CGCTGATCCGCAGCCAGGAGCTGGGCGACGAGAAGATCCAG CGCTGATCCGCAGCCAGGAGCTGAGCGACGAGAAGATCCAG < 41bp 0.748477385955141 0.51055741640092 0.8372667 0.87390757 prediction 0.475839939108443 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371689 chr13:111371692 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_70350 0 0 1 UCHL5 POSTAR2 ENCODE chr13:111371687-111371810
64251 chr17 42153069 42153069 1 + G A rs529935686 42153066 + 42153046 42153086 41 AGGTCCATCAGCCTAGCCTTCAAGTGGTGTGAGCGGCCTGA AGGTCCATCAGCCTAGCCTTCAAATGGTGTGAGCGGCCTGA < 41bp 0.748193196258692 0.51027411487607 0.812011 0.7849317 prediction 0.475838162765245 Functional Loss - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42153066 chr17:42153069 synonymous SNV . 0 24 hm5C_associated_SNPs_70351 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42153048-42153069
64251 chr11 554168 554168 1 + C T LGG 554166 + 554146 554186 41 GAGCCCTGGAGGTGGCCTCACGCCTGAGCCCTCGAGCCCAG GAGCCCTGGAGGTGGCCTCACGTCTGAGCCCTCGAGCCCAG < 41bp 0.767604051362591 0.529695935000284 0.36267984 0.36682934 prediction 0.475816232724612 Functional Loss - LRRC56 ENSG00000161328 CDS Human protein_coding chr11:554166 chr11:554168 synonymous SNV . 0 23 hm5C_associated_SNPs_70355 0 0 2 AKAP8L POSTAR2 ENCODE chr11:554124-554174
64251 chr3 101476585 101476585 1 + C T OV 101476583 + 101476563 101476603 41 TGTACACACTACGAGATATTCTCGAAATGATCTGCACCTGG TGTACACACTACGAGATATTCTTGAAATGATCTGCACCTGG < 41bp 0.848822560970308 0.610924503016013 0.926098 0.1323176 prediction 0.47579611590859 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101476583 chr3:101476585 stopgain 0.998 0 23 hm5C_associated_SNPs_70362 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr3:101476569-101476612
64251 chr17 43227360 43227360 1 + C T BLCA 43227358 + 43227338 43227378 41 GAGTTTCTGCAGCGGGACTTCTCGGAGACGTACGAGCGGTA GAGTTTCTGCAGCGGGACTTCTTGGAGACGTACGAGCGGTA < 41bp 0.809852531114408 0.57195506662814 0.79617554 0.35624245 prediction 0.475794928972535 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43227358 chr17:43227360 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_70363 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:43227338-43227367
64251 chr17 900500 900500 1 + C T BRCA 900498 + 900478 900518 41 GGTGGGTGACAAGCGTCAGCCCCGGCTCCTGGAGCCTGGGA GGTGGGTGACAAGCGTCAGCCCTGGCTCCTGGAGCCTGGGA < 41bp 0.762682298175615 0.524788592349282 0.7439706 0.48961043 prediction 0.475787411652667 Functional Loss - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900498 chr17:900500 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_70364 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:900467-900505
64251 chr16 3367399 3367399 1 + A C LUSC 3367395 + 3367375 3367415 41 AAAAGAAAGAAACTTTCAACCTGGAAACAAGAGCTGCTCAA AAAAGAAAGAAACTTTCAACCTGGCAACAAGAGCTGCTCAA < 41bp 0.922559388065627 0.684692058964883 0.24822721 0.18001482 prediction 0.475734658201488 Functional Loss - ZNF75A ENSG00000162086 CDS Human protein_coding chr16:3367395 chr16:3367399 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_70375 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:3367383-3367422
64251 chr3 47451773 47451773 1 + C T UCEC 47451771 + 47451751 47451791 41 CTACCCAGCCCCTGCCTACACACCGGAGCTGGGCCTTGTGC CTACCCAGCCCCTGCCTACACATCGGAGCTGGGCCTTGTGC < 41bp 0.745221485267272 0.507354933887181 0.16608676 0.14420775 prediction 0.475733102760182 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47451771 chr3:47451773 nonsynonymous SNV 0.264 0 23 hm5C_associated_SNPs_70376 0 0 4 DDX59 POSTAR2 ENCODE chr3:47451732-47451780
64251 chr3 9956940 9956940 1 + G A LUAD 9956937 + 9956917 9956957 41 GTTGCTTCCCGCCACCAGGCCCGGGCCCAGCGCGGCCAGTG GTTGCTTCCCGCCACCAGGCCCGAGCCCAGCGCGGCCAGTG < 41bp 0.751806505106801 0.513940813448907 0.42336732 0.1333929 prediction 0.475731383315787 Functional Loss - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9956937 chr3:9956940 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_70377 0 0 1 BUD13 POSTAR2 ENCODE chr3:9956896-9956960
64251 chr5 170863159 170863159 1 + G C LUAD 170863155 + 170863135 170863175 41 CGTGGAGAACCAGACGCGGGCTCGGGACGATGTGAGCCGTA CGTGGAGAACCAGACGCGGGCTCGCGACGATGTGAGCCGTA < 41bp 0.819402311226744 0.581542485541999 0.3443612 0.27717912 prediction 0.47571965136949 Functional Loss - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170863155 chr5:170863159 synonymous SNV . 0 25 hm5C_associated_SNPs_70381 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:170863129-170863174
64251 chr9 2056842 2056842 1 + C T SKCM 2056840 + 2056820 2056860 41 AGAGGAAACGCCGTCAGAAACACCAGGTTCTTAGACCCTGG AGAGGAAACGCCGTCAGAAACATCAGGTTCTTAGACCCTGG < 41bp 0.825289414079319 0.587440069947344 0.35751748 0.3027567 prediction 0.475698688263951 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2056840 chr9:2056842 synonymous SNV . 0 23 hm5C_associated_SNPs_70384 0 0 2 AGGF1 POSTAR2 ENCODE chr9:2056777-2056854
64251 chr10 105200312 105200312 1 + G T STAD 105200309 + 105200289 105200329 41 AGGCGCAGAAGCGGGGCGGGCGGGAGTGCCGGGAGTCTGGG AGGCGCAGAAGCGGGGCGGGCGGTAGTGCCGGGAGTCTGGG < 41bp 0.920638683304541 0.682793126798147 0.90957594 0.89468336 prediction 0.475691113012787 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105200309 chr10:105200312 stopgain 0.000 0 24 hm5C_associated_SNPs_70385 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr10:105200300-105200320
64251 chr7 97822506 97822506 1 + G T rs116651302 97822504 + 97822484 97822524 41 CTTGCTGATGACATCCTTGCCAGCAGGGTGAGTGTAGGGAG CTTGCTGATGACATCCTTGCCATCAGGGTGAGTGTAGGGAG < 41bp 0.737845476419493 0.442078414103683 0.31888908 0.20128328 prediction 0.475690952838985 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822504 chr7:97822506 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_70387 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:97822481-97822513
64251 chr5 901542 901542 1 + C T UCEC 901540 + 901520 901560 41 CCTGGAACCGGGTGGTGCTGCTCCACGGTAAATTATGCAGG CCTGGAACCGGGTGGTGCTGCTTCACGGTAAATTATGCAGG < 41bp 0.737843655278902 0.438671975765769 0.91353583 0.2450465 prediction 0.475687310557804 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:901540 chr5:901542 synonymous SNV . 0 23 hm5C_associated_SNPs_70389 0 0 3 PPIG POSTAR2 ENCODE chr5:901503-901546
64251 chr14 23070604 23070604 1 + C T GBM 23070602 + 23070582 23070622 41 TGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTTCCAT TGGCTGAGTAGCTGGCTGCCCATGTGGCGCCCCACTTCCAT < 41bp 0.798581169505957 0.560740587430965 0.15114343 0.13640097 prediction 0.475681164149984 Functional Loss - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23070602 chr14:23070604 nonsynonymous SNV 0.884 2 23 hm5C_associated_SNPs_70390 0 0 6 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:23070596-23070623
64251 chr1 156702804 156702804 1 + G T MESO 156702802 + 156702782 156702822 41 GAAGAAGCTGAGTGATTTCACAGGCTGCACCCAGGTTGTAG GAAGAAGCTGAGTGATTTCACATGCTGCACCCAGGTTGTAG < 41bp 0.737839073895732 0.383266042386002 0.8145391 0.17780095 prediction 0.475678147791464 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702802 chr1:156702804 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_70392 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156702777-156702832
64251 chr16 70500122 70500122 1 + T C UCEC 70500121 + 70500101 70500141 41 GCCCCCGTGGAAGCCTTGGTCTGCAACCTGGACTGCCTGCT GCCCCCGTGGAAGCCTTGGTCCGCAACCTGGACTGCCTGCT < 41bp 0.783944880002611 0.546106681465394 0.57235235 0.6931751 prediction 0.475676397074434 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70500121 chr16:70500122 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_70393 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:70500070-70500124
64251 chr8 20074767 20074767 1 + C T UCEC 20074765 + 20074745 20074785 41 CAATGTGCTGCCCTCACTATCACGGTTAATGAAGTCTGCTA CAATGTGCTGCCCTCACTATCATGGTTAATGAAGTCTGCTA < 41bp 0.818771695278164 0.580952354424496 0.9041303 0.9289187 prediction 0.475638681707336 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20074765 chr8:20074767 nonsynonymous SNV 0.867 5 23 hm5C_associated_SNPs_70401 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:20074751-20074775
64251 chr12 50869600 50869600 1 + C T READ 50869598 + 50869578 50869618 41 GGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGC GGCTATACCTCAGGGAGTGACTTGACGTAATGGCAAAGAGC < 41bp 0.822577972175903 0.584762409467592 0.40984756 0.3296463 prediction 0.475631125416623 Functional Loss - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869598 chr12:50869600 stopgain 1.000 1 23 hm5C_associated_SNPs_70404 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:50869543-50869618
64251 chr2 234367008 234367008 1 + C T SKCM 234367006 + 234366986 234367026 41 CAGCATGCAGATGGCCGTCTCTCGAGTCATCAGGCTACAGC CAGCATGCAGATGGCCGTCTCTTGAGTCATCAGGCTACAGC < 41bp 0.841378278071311 0.603577988488187 0.7332685 0.09512094 prediction 0.475600579166248 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234367006 chr2:234367008 stopgain 0.964 1 23 hm5C_associated_SNPs_70411 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr2:234366990-234367021
64251 chr8 23148976 23148976 1 + G A CESC 23148973 + 23148953 23148993 41 CTGGAGAGAAGGACCTTGCCCACGTGGTAGAGATCTATGAC CTGGAGAGAAGGACCTTGCCCACATGGTAGAGATCTATGAC < 41bp 0.743211350645289 0.50541759361585 0.15388593 0.16043496 prediction 0.475587514058877 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23148973 chr8:23148976 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_70417 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr8:23148960-23148989
64251 chr7 142962173 142962173 1 + C T COAD 142962171 + 142962151 142962191 41 CGTCCCGGGAGCTGTGGATGCGCGTCTGGTCAAGGGTGAGT CGTCCCGGGAGCTGTGGATGCGTGTCTGGTCAAGGGTGAGT < 41bp 0.816524833661786 0.578742757378013 0.1317488 0.16116169 prediction 0.475564152567546 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962171 chr7:142962173 synonymous SNV . 0 23 hm5C_associated_SNPs_70421 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:142962146-142962181
64251 chr5 115177721 115177721 1 + G C rs1050864 115177720 + 115177700 115177740 41 GCCCCCAGTGCCCACCCGGTCGGCCCGGCACAGCCATGATC GCCCCCAGTGCCCACCCGGTCCGCCCGGCACAGCCATGATC < 41bp 0.737780457469853 0.464917926303528 0.32101166 0.11833483 prediction 0.475560914939705 Functional Loss - AP3S1 ENSG00000177879 UTR5 Human protein_coding chr5:115177720 chr5:115177721 . . 0 22 hm5C_associated_SNPs_70423 0 0 5 DDX3X POSTAR2 ENCODE chr5:115177635-115177744
64251 chr17 7559462 7559462 1 + G A rs1641512 7559459 + 7559439 7559479 41 GGGAGCTGGGCTAAGATGGCCACGGAGGAGTTAGGAGCCTT GGGAGCTGGGCTAAGATGGCCACAGAGGAGTTAGGAGCCTT < 41bp 0.739339061042954 0.50156893609862 0.3229164 0.23524436 prediction 0.475540249888669 Functional Loss - ATP1B2 ENSG00000129244 UTR3 Human protein_coding chr17:7559459 chr17:7559462 . . 0 24 hm5C_associated_SNPs_70424 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:7559404-7559483
64251 chr19 49703643 49703643 1 + C T UCEC 49703641 + 49703621 49703661 41 GTGCGGCTGCTTCACATCTTCACGGTCAACAAACAGCTGGG GTGCGGCTGCTTCACATCTTCATGGTCAACAAACAGCTGGG < 41bp 0.73776274808095 0.466961060218437 0.18803436 0.22792256 prediction 0.475525496161901 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49703641 chr19:49703643 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_70429 0 0 1 DDX24 POSTAR2 ENCODE chr19:49703641-49703680
64251 chr17 73227683 73227683 1 + G A SARC 73227680 + 73227660 73227700 41 TATTCCAGTTTCGGTTCCAACATGAGAGAGTTCCTCCTGCT TATTCCAGTTTCGGTTCCAACATAAGAGAGTTCCTCCTGCT < 41bp 0.742110119933767 0.504349733828598 0.37663472 0.26394925 prediction 0.475520772210337 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73227680 chr17:73227683 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_70430 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:73227639-73227684
64251 chr1 228400285 228400285 1 - C T BLCA 228400288 - 228400268 228400308 41 CCGTCCTTCTTCCACACCGTCTCGGGCTTGGGCTCGCCGGT CCGTCCTTCTTCCACACCGTCTCAGGCTTGGGCTCGCCGGT < 41bp 0.749374054235722 0.511614799321576 0.09650326 0.058898985 prediction 0.475518509828293 Functional Loss - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228400288 chr1:228400285 synonymous SNV . 0 24 hm5C_associated_SNPs_70431 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228400269-228400301
64251 chr19 41903824 41903824 1 + G C LUAD 41903823 + 41903803 41903843 41 TGCTGCGGCAGCCTGGGGCTCGGGGACTGGCTAGATCTGTG TGCTGCGGCAGCCTGGGGCTCCGGGACTGGCTAGATCTGTG < 41bp 0.86350966497296 0.625759821191789 0.9054731 0.87076676 prediction 0.475499687562343 Functional Loss - BCKDHA ENSG00000248098 CDS Human protein_coding chr19:41903823 chr19:41903824 nonsynonymous SNV 0.946 2 22 hm5C_associated_SNPs_70437 0 0 2 DDX3X POSTAR2 ENCODE chr19:41903723-41903834
64251 chr18 12325335 12325335 1 + T C STAD 12325334 + 12325314 12325354 41 TCGGACACGGTGGTGGAGCCCTACAATGCCACACTGTCGGT TCGGACACGGTGGTGGAGCCCCACAATGCCACACTGTCGGT < 41bp 0.775857618462218 0.538115403552762 0.9485421 0.08030784 prediction 0.475484429818913 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325334 chr18:12325335 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_70440 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr18:12325334-12325335
64251 chrX 24228960 24228960 1 + G T UCS 24228957 + 24228937 24228977 41 AGCAACATGCTCTTATCCACCAAGAAAGCAAAACACACCAG AGCAACATGCTCTTATCCACCAATAAAGCAAAACACACCAG < 41bp 0.737741978735116 0.36917448278573 0.90566397 0.34537372 prediction 0.475483957470233 Functional Loss - ZFX ENSG00000005889 CDS Human protein_coding chrX:24228957 chrX:24228960 stopgain 1.000 1 24 hm5C_associated_SNPs_70441 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:24228928-24228960
64251 chr20 10030376 10030376 1 + G A BLCA 10030373 + 10030353 10030393 41 CTCACCTTCATGAGAAAACCCGGGGAGGAGGGGTCAATATT CTCACCTTCATGAGAAAACCCGGAGAGGAGGGGTCAATATT < 41bp 0.755205088319083 0.517468054920054 0.89826477 0.72958606 prediction 0.475474066798058 Functional Loss - ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10030373 chr20:10030376 nonsynonymous SNV 0.546 0 24 hm5C_associated_SNPs_70443 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:10030366-10030397
64251 chr2 121748067 121748067 1 + C T SKCM 121748065 + 121748045 121748085 41 GGCGATCACTCGAGTTTGTTCTCGGGTGCTCTGAGCCCCAG GGCGATCACTCGAGTTTGTTCTTGGGTGCTCTGAGCCCCAG < 41bp 0.737731374237725 0.48288211019781 0.24745142 0.20500827 prediction 0.47546274847545 Functional Loss - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121748065 chr2:121748067 nonsynonymous SNV 0.687 4 23 hm5C_associated_SNPs_70445 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:121748067-121748068
64251 chr22 50644876 50644876 1 + G A UCEC 50644873 + 50644853 50644893 41 CGTCCGAGTCCACGGTGGTGCGCGACGTGTTCTATGATGGT CGTCCGAGTCCACGGTGGTGCGCAACGTGTTCTATGATGGT < 41bp 0.737731270120937 0.490892200134047 0.32246196 0.16444066 prediction 0.475462540241874 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50644873 chr22:50644876 unknown 0.802 4 24 hm5C_associated_SNPs_70446 0 0 1 PPIG POSTAR2 ENCODE chr22:50644852-50644882
64251 chr14 38091460 38091460 1 + G A UCEC 38091457 + 38091437 38091477 41 CCCCGGCCCGGCCCGCCCCGCGCGCGTTTCCTGCGCCGCAG CCCCGGCCCGGCCCGCCCCGCGCACGTTTCCTGCGCCGCAG < 41bp 0.7515751734832 0.513847781077832 0.93727267 0.798111 prediction 0.475454784810736 Functional Loss - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38091457 chr14:38091460 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_70447 0 0 1 RBM15 POSTAR2 ENCODE chr14:38091366-38091471
64251 chr11 75438579 75438579 1 + G T LUSC 75438577 + 75438557 75438597 41 AGCCTTTGCCAACCTGTGCACTGAGAGCACAGGCTTCTCTT AGCCTTTGCCAACCTGTGCACTTAGAGCACAGGCTTCTCTT < 41bp 0.737716315275724 0.374901940692699 0.023956269 0.014051288 prediction 0.475432630551449 Functional Loss - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75438577 chr11:75438579 stopgain 0.946 1 23 hm5C_associated_SNPs_70453 0 0 1 DDX3X POSTAR2 ENCODE chr11:75438526-75438590
64251 chr20 61449889 61449889 1 + G A SKCM 61449886 + 61449866 61449906 41 ACAGGGAGAAGCTGGTCCTCCAGGTCTGCCTGGGCCCCCGG ACAGGGAGAAGCTGGTCCTCCAGATCTGCCTGGGCCCCCGG < 41bp 0.768133804955674 0.530419000096313 0.6718789 0.47279042 prediction 0.475429609718722 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61449886 chr20:61449889 nonsynonymous SNV 0.953 4 24 hm5C_associated_SNPs_70455 0 0 14 BUD13 POSTAR2 ENCODE chr20:61449869-61449905
64251 chr3 45561788 45561788 1 + G A STAD 45561785 + 45561765 45561805 41 ATGGGACTCAGCAATGCCCTCTCGGTAAGTGGCCTGTCCTC ATGGGACTCAGCAATGCCCTCTCAGTAAGTGGCCTGTCCTC < 41bp 0.751474481220952 0.513767381155831 0.11526367 0.040637314 prediction 0.475414200130242 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45561785 chr3:45561788 synonymous SNV . 0 24 hm5C_associated_SNPs_70460 0 0 1 PRPF8 POSTAR2 ENCODE chr3:45561764-45561822
64251 chr6 126278232 126278232 1 + A C LIHC 126278231 + 126278211 126278251 41 GGGACCTGTGAAGCCGCTGGCAAGTCACCAGAGCCCAAGGA GGGACCTGTGAAGCCGCTGGCCAGTCACCAGAGCCCAAGGA < 41bp 0.737696692020905 0.489167774932321 0.2894761 0.11304155 prediction 0.47539338404181 Functional Loss - HINT3 ENSG00000111911 CDS Human protein_coding chr6:126278231 chr6:126278232 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_70467 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:126278209-126278235
64251 chr16 8736394 8736394 1 + T C KIRP 8736393 + 8736373 8736413 41 GCCCACAGATTGAAAAATGCCTGCACAGCCATACTGTCGGT GCCCACAGATTGAAAAATGCCCGCACAGCCATACTGTCGGT < 41bp 0.80579961553221 0.568106689592396 0.11782208 0.040543586 prediction 0.475385851879628 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8736393 chr16:8736394 nonsynonymous SNV 0.974 2 22 hm5C_associated_SNPs_70469 0 0 4 PPIG POSTAR2 ENCODE chr16:8736373-8736440
64251 chr2 181927573 181927573 1 + C T COAD 181927571 + 181927551 181927591 41 ATTTGACCAACAGAGCAGAACACGACAGGATAGCCAGACAG ATTTGACCAACAGAGCAGAACATGACAGGATAGCCAGACAG < 41bp 0.810840088410434 0.573155270078251 0.17912433 0.16699365 prediction 0.475369636664366 Functional Loss - UBE2E3 ENSG00000170035 CDS Human protein_coding chr2:181927571 chr2:181927573 synonymous SNV . 0 23 hm5C_associated_SNPs_70478 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704215 chr2:181927560-181927580
64251 chr9 138011423 138011423 1 + C T UCEC 138011421 + 138011401 138011441 41 TCCATGGTTGACTTCATGAACACGGACAATTTCACCTCCCA TCCATGGTTGACTTCATGAACATGGACAATTTCACCTCCCA < 41bp 0.775700392002704 0.53801745818351 0.08747271 0.045670748 prediction 0.475365867638387 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011421 chr9:138011423 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_70482 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:138011400-138011440
64251 chr11 46726892 46726892 1 + G C LUSC 46726891 + 46726871 46726911 41 CGCCATCTCATCTCACACACCGGGGAGGCCCACTTGTGCCC CGCCATCTCATCTCACACACCCGGGAGGCCCACTTGTGCCC < 41bp 0.875728708916148 0.638051192029203 0.9056405 0.34628943 prediction 0.47535503377389 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726891 chr11:46726892 nonsynonymous SNV 0.932 4 22 hm5C_associated_SNPs_70483 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:46726872-46726895
64251 chr16 89784290 89784290 1 + G A rs534300862 89784287 + 89784267 89784307 41 TGCCCCGACCTCTGTGATCCCACGTCCAGGGGCTCCCCCGA TGCCCCGACCTCTGTGATCCCACATCCAGGGGCTCCCCCGA < 41bp 0.750224522773022 0.512554151472439 0.36254382 0.124441564 prediction 0.475340742601165 Functional Loss - VPS9D1-AS1 ENSG00000261373 ncRNA_exonic Human antisense chr16:89784287 chr16:89784290 . . 0 24 hm5C_associated_SNPs_70485 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:89784167-89784339
64251 chr19 15770046 15770046 1 + G A LUAD 15770043 + 15770023 15770063 41 CCCCAAGGAACTGCATCGGGCAGGCGTTCGCGATGGCGGAG CCCCAAGGAACTGCATCGGGCAGACGTTCGCGATGGCGGAG < 41bp 0.753096873141881 0.515430260728392 0.44408098 0.24654105 prediction 0.475333224826977 Functional Loss - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15770043 chr19:15770046 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_70488 0 0 2 PPIG POSTAR2 ENCODE chr19:15770029-15770094
64251 chrX 65480022 65480022 1 + T C LUSC 65480021 + 65480001 65480041 41 GGAGATGGTGGCCAGCAACCCTGGGACATGGCTGATGCACT GGAGATGGTGGCCAGCAACCCCGGGACATGGCTGATGCACT < 41bp 0.743653626221109 0.505999796194839 0.41442853 0.69769627 prediction 0.47530766005254 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65480021 chrX:65480022 synonymous SNV . 0 22 hm5C_associated_SNPs_70493 0 0 2 LIN28B POSTAR2 ENCODE chrX:65479993-65480039
64251 chr7 37988586 37988586 1 + C T SKCM 37988583 + 37988563 37988603 41 TCCACCTTTGAAGACCAGTACTCCATCGGGGGGCCTCAGGA TCCACCTTTGAAGACCAGTACTCTATCGGGGGGCCTCAGGA < 41bp 0.740871562167551 0.503218782235337 0.95330584 0.9251785 prediction 0.475305559864428 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37988583 chr7:37988586 synonymous SNV . 0 24 hm5C_associated_SNPs_70495 0 0 4 NOL12 POSTAR2 ENCODE chr7:37988565-37988609
64251 chr12 65564198 65564198 1 + G T GBM 65564196 + 65564176 65564216 41 ACGACGTGGCCTCCAGCAGACAGGTATTAAAGGACGACTCC ACGACGTGGCCTCCAGCAGACATGTATTAAAGGACGACTCC < 41bp 0.737639640077884 0.384926368383412 0.89752716 0.05853942 prediction 0.475279280155768 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564196 chr12:65564198 nonsynonymous SNV 0.764 0 23 hm5C_associated_SNPs_70504 0 0 1 UCHL5 POSTAR2 ENCODE chr12:65564193-65564299
64251 chr7 87505973 87505973 1 + G T rs561400295 87505971 + 87505951 87505991 41 CGGCCGTCCTGTCAACAGGCCGGGGGAAGCCGTGCTTTCGC CGGCCGTCCTGTCAACAGGCCGTGGGAAGCCGTGCTTTCGC < 41bp 0.81751888583993 0.579880298981862 0.9138466 0.47421673 prediction 0.475277173716135 Functional Loss - DBF4 ENSG00000006634 UTR5 Human protein_coding chr7:87505971 chr7:87505973 . . 0 23 hm5C_associated_SNPs_70505 0 0 1 DDX3X POSTAR2 ENCODE chr7:87505902-87506027
64251 chr9 4583043 4583043 1 + C T LUAD 4583041 + 4583021 4583061 41 CTGGTATGTTTCTGCAGTATCACGGCCACATCTGCCAGCAT CTGGTATGTTTCTGCAGTATCATGGCCACATCTGCCAGCAT < 41bp 0.80937181848187 0.571733471377827 0.8917595 0.91094655 prediction 0.475276694208086 Functional Loss - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4583041 chr9:4583043 nonsynonymous SNV 0.146 3 23 hm5C_associated_SNPs_70507 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:4583037-4583063
64251 chr4 83351845 83351845 1 + G T rs1045250 83351843 + 83351823 83351863 41 TGTCCTCTCCCCACGCGCGGCGGGCTGCACTTGGTCGCTGG TGTCCTCTCCCCACGCGCGGCGTGCTGCACTTGGTCGCTGG < 41bp 0.737630585087043 0.424659309451596 0.43383765 0.23848718 prediction 0.475261170174087 Functional Loss - ENOPH1 ENSG00000145293 UTR5 Human protein_coding chr4:83351843 chr4:83351845 . . 0 23 hm5C_associated_SNPs_70510 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:83351824-83351855
64251 chr22 35811869 35811869 1 + G A COAD 35811866 + 35811846 35811886 41 AGCGCAGCTGGACTGACAGCCTCGGTGATGAGGGACCCTTC AGCGCAGCTGGACTGACAGCCTCAGTGATGAGGGACCCTTC < 41bp 0.74326134721951 0.505631734806977 0.19794187 0.14944151 prediction 0.475259224825067 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811866 chr22:35811869 synonymous SNV . 0 24 hm5C_associated_SNPs_70511 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr22:35811849-35811879
64251 chr4 110452656 110452656 1 + G T LUAD 110452654 + 110452634 110452674 41 ATGATTCATCCCAACTTATACAGGATAGACAGATTGACAGA ATGATTCATCCCAACTTATACATGATAGACAGATTGACAGA < 41bp 0.737629205207064 0.413398214179579 0.51590455 0.03498903 prediction 0.475258410414129 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110452654 chr4:110452656 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_70512 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr4:110452636-110452656
64251 chr12 65564324 65564324 1 + C T rs183253527 65564322 + 65564302 65564342 41 CAGTTCAGGGAGGGGGAGGACTCGCGATGAATGACAGGGCG CAGTTCAGGGAGGGGGAGGACTTGCGATGAATGACAGGGCG < 41bp 0.801328526411698 0.56370621971278 0.8465719 0.7826361 prediction 0.475244613397836 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564322 chr12:65564324 synonymous SNV . 0 23 hm5C_associated_SNPs_70516 1 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:65564273-65564325
64251 chr5 43653246 43653246 1 + G A UCEC 43653243 + 43653223 43653263 41 CTGGAGGACTGGCAGCCACCCTCGGAGTCCTAAAACCGGGC CTGGAGGACTGGCAGCCACCCTCAGAGTCCTAAAACCGGGC < 41bp 0.758884873823622 0.521265846932211 0.46059498 0.20422 prediction 0.475238053782822 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43653243 chr5:43653246 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_70519 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:43653229-43653253
64251 chr2 234363497 234363497 1 + G A UCEC 234363494 + 234363474 234363514 41 CCCTGGACTTTAACAACAAGCGCGATGAGCACCCAGAGAAG CCCTGGACTTTAACAACAAGCGCAATGAGCACCCAGAGAAG < 41bp 0.747263166123993 0.509644999424031 0.15431821 0.06031558 prediction 0.475236333399924 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234363494 chr2:234363497 nonsynonymous SNV 0.660 4 24 hm5C_associated_SNPs_70521 0 0 3 DDX24 POSTAR2 ENCODE chr2:234363472-234363520
64251 chr19 18961599 18961599 1 + G T UCEC 18961596 + 18961576 18961616 41 TGCTTCCTGTCCTGGCTGGTCAAGATCCCCTCCGAGCAGGA TGCTTCCTGTCCTGGCTGGTCAATATCCCCTCCGAGCAGGA < 41bp 0.737615659225542 0.33444820447949 0.39488456 0.11935219 prediction 0.475231318451084 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18961596 chr19:18961599 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_70524 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:18961598-18961599
64251 chr16 83941865 83941865 1 + G A rs77493891 83941862 + 83941842 83941882 41 CGTTTTGCACGTGGCACTGACTGGTGACATCTCCAGCAACA CGTTTTGCACGTGGCACTGACTGATGACATCTCCAGCAACA < 41bp 0.737613308854471 0.491635253283894 0.0052480698 0.0008440614 prediction 0.475226617708942 Functional Loss - MLYCD ENSG00000103150;ENSG00000260300 CDS Human other chr16:83941862 chr16:83941865 nonsynonymous SNV 0.233 1 24 hm5C_associated_SNPs_70526 0 0 2 PPIG POSTAR2 ENCODE chr16:83941809-83941897
64251 chr4 155487137 155487137 1 + G A UCS 155487134 + 155487114 155487154 41 CTGATGCTGGAGGCTGTCTTCACGCTGACCCAGACCTGGTG CTGATGCTGGAGGCTGTCTTCACACTGACCCAGACCTGGTG < 41bp 0.749225295980821 0.51162149500507 0.30773944 0.28426677 prediction 0.475207601951502 Functional Loss - FGB ENSG00000171564 CDS Human protein_coding chr4:155487134 chr4:155487137 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_70528 1 0 4 RPS3 POSTAR2 ENCODE chr4:155487115-155487152
64251 chr7 149558959 149558959 1 + G A UCEC 149558956 + 149558936 149558976 41 GCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAA GCTTCAAGGATGGGCGGCTCCACAGCATCTGCTTGGACAAA < 41bp 0.769373166618599 0.531776279080311 0.33318627 0.13269794 prediction 0.475193775076576 Functional Loss - ZNF862 ENSG00000106479 CDS Human protein_coding chr7:149558956 chr7:149558959 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_70531 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:149558946-149558970
64251 chr9 80851454 80851454 1 + A T UCEC 80851450 + 80851430 80851470 41 GGGCGCCTCTGCTGAGCACCCTCAAGATCAATAAAGACCTG GGGCGCCTCTGCTGAGCACCCTCATGATCAATAAAGACCTG < 41bp 0.791227972831234 0.553634298138932 0.037612885 0.07623568 prediction 0.475187349384604 Functional Loss - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80851450 chr9:80851454 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_70533 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:80851453-80851481
64251 chr8 65294621 65294621 1 + C T rs117727185 65294619 + 65294599 65294639 41 CAATAAAACAACCCGGGCTTCGCAATGGGAGAACTTCGGTG CAATAAAACAACCCGGGCTTCGTAATGGGAGAACTTCGGTG < 41bp 0.794032516924417 0.556464583174671 0.23440215 0.2068196 prediction 0.475135867499493 Functional Loss - MIR124-2HG ENSG00000254377 ncRNA_exonic Human lincRNA chr8:65294619 chr8:65294621 . . 0 23 hm5C_associated_SNPs_70546 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:65294600-65294640
64251 chr17 40717008 40717008 1 + C T SKCM 40717006 + 40716986 40717026 41 GTCTGTGTTGTCCAGATATTCTCCATAAAGATGGCATCATC GTCTGTGTTGTCCAGATATTCTTCATAAAGATGGCATCATC < 41bp 0.858066656881243 0.620501891167929 0.9577632 0.034088284 prediction 0.475129531426627 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40717006 chr17:40717008 synonymous SNV . 0 23 hm5C_associated_SNPs_70547 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40717000-40717040
64251 chrX 48652490 48652490 1 + G T STAD 48652488 + 48652468 48652508 41 TGCCTTTCCCTGGACCCCTACTGGGCTCACCCACGGGCTCC TGCCTTTCCCTGGACCCCTACTTGGCTCACCCACGGGCTCC < 41bp 0.897582186197132 0.660023717619867 0.8491132 0.2036458 prediction 0.475116937154531 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652488 chrX:48652490 synonymous SNV . 0 23 hm5C_associated_SNPs_70549 0 0 2 DDX55 POSTAR2 ENCODE chrX:48652473-48652513
64251 chr16 2550317 2550317 1 + G A UCEC 2550314 + 2550294 2550334 41 AGTGGGTGGTGATCAAGCACCCCGAGCTGACCAAGCCCCCA AGTGGGTGGTGATCAAGCACCCCAAGCTGACCAAGCCCCCA < 41bp 0.740127276315594 0.502571678467974 0.1989618 0.06744763 prediction 0.475111195695239 Functional Loss - TBC1D24 ENSG00000162065 CDS Human protein_coding chr16:2550314 chr16:2550317 nonsynonymous SNV 0.933 3 24 hm5C_associated_SNPs_70551 0 0 1 UCHL5 POSTAR2 ENCODE chr16:2550244-2550318
64251 chr11 237093 237093 1 + G T LUAD 237090 + 237070 237110 41 CCTACAGCAGAGCCAGAACTCCGGGCCCGGGCAGCCCGCTG CCTACAGCAGAGCCAGAACTCCGTGCCCGGGCAGCCCGCTG < 41bp 0.922066128008686 0.6845115379549 0.9176291 0.893188 prediction 0.475109180107573 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:237090 chr11:237093 nonsynonymous SNV 0.930 1 24 hm5C_associated_SNPs_70553 0 0 8 DDX3X POSTAR2 ENCODE chr11:237063-237106
64251 chr20 54972782 54972782 1 + C T UCEC 54972780 + 54972760 54972800 41 TATGACCATGTGGATGAAGTCACGTGCCTTGCTTTCCACCC TATGACCATGTGGATGAAGTCATGTGCCTTGCTTTCCACCC < 41bp 0.836598834011726 0.599055767233122 0.75166917 0.5269993 prediction 0.475086133557208 Functional Loss - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54972780 chr20:54972782 nonsynonymous SNV 0.850 4 23 hm5C_associated_SNPs_70555 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:54972749-54972787
64251 chr12 56531130 56531130 1 + G A UCEC 56531127 + 56531107 56531147 41 GCCCCACCTCGACCCTGTCACACGACTCCTGATAGCCAGTT GCCCCACCTCGACCCTGTCACACAACTCCTGATAGCCAGTT < 41bp 0.755744198571818 0.51820976917155 0.35493195 0.32713154 prediction 0.475068858800535 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56531127 chr12:56531130 synonymous SNV . 0 24 hm5C_associated_SNPs_70559 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr12:56531114-56531137
64251 chr8 21959239 21959239 1 + C T STAD 21959237 + 21959217 21959257 41 AGTTCCAGGAGTGCAGCTCCCGCGTCGCCTCCTGGGGCTGG AGTTCCAGGAGTGCAGCTCCCGTGTCGCCTCCTGGGGCTGG < 41bp 0.737531305391986 0.47657913828506 0.3146761 0.27055764 prediction 0.475062610783971 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21959237 chr8:21959239 synonymous SNV . 0 23 hm5C_associated_SNPs_70561 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585664 chr8:21959220-21959240
64251 chr8 21959240 21959240 1 + G A STAD 21959237 + 21959217 21959257 41 AGTTCCAGGAGTGCAGCTCCCGCGTCGCCTCCTGGGGCTGG AGTTCCAGGAGTGCAGCTCCCGCATCGCCTCCTGGGGCTGG < 41bp 0.737531305391986 0.491559665370811 0.3146761 0.25612316 prediction 0.475062610783971 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21959237 chr8:21959240 nonsynonymous SNV 0.048 2 24 hm5C_associated_SNPs_70562 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585664 chr8:21959220-21959240
64251 chr11 85968606 85968606 1 + G T UCEC 85968603 + 85968583 85968623 41 CAATGAGCTGAAATTCCATCCAAGAGATCCAAATCTTCTCC CAATGAGCTGAAATTCCATCCAATAGATCCAAATCTTCTCC < 41bp 0.737529601507053 0.358726030953769 0.18017626 0.07197219 prediction 0.475059203014107 Functional Loss - EED ENSG00000074266 CDS Human protein_coding chr11:85968603 chr11:85968606 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_70564 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:85968587-85968628
64251 chr22 50637074 50637074 1 + G A rs3747940 50637071 + 50637051 50637091 41 CATGGGGGTCTGGGCCCGGCCTCGCCTGCCCTCCTGGGCCA CATGGGGGTCTGGGCCCGGCCTCACCTGCCCTCCTGGGCCA < 41bp 0.753358163998608 0.515830693295242 0.25206596 0.107087374 prediction 0.475054941406731 Functional Loss - TRABD ENSG00000170638 UTR3 Human protein_coding chr22:50637071 chr22:50637074 . . 0 24 hm5C_associated_SNPs_70565 0 0 1 DDX59 POSTAR2 ENCODE chr22:50637060-50637101
64251 chr20 34828032 34828032 1 + T C UCEC 34828031 + 34828011 34828051 41 GTATGGGTTTCTTCCTTAGCCTGCACCAGCGGGGGCTGACA GTATGGGTTTCTTCCTTAGCCCGCACCAGCGGGGGCTGACA < 41bp 0.786573101072906 0.549046934939457 0.06472197 0.048872918 prediction 0.475052332266898 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828031 chr20:34828032 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_70566 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:34828020-34828040
64251 chr16 46943763 46943763 1 + C T SKCM 46943761 + 46943741 46943781 41 GGGCGCTGAATGTGAATGAGCTCCGGCGGGCGGTGCAGGAG GGGCGCTGAATGTGAATGAGCTTCGGCGGGCGGTGCAGGAG < 41bp 0.737522560864495 0.446257666590079 0.39489803 0.41076672 prediction 0.475045121728991 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46943761 chr16:46943763 synonymous SNV . 0 23 hm5C_associated_SNPs_70568 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr16:46943746-46943784
64251 chr19 18499472 18499472 1 + G T KIRC 18499469 + 18499449 18499489 41 TGCCGTCTGCACACGGTCCGCGCGTCGCTGGAAGACCTGGG TGCCGTCTGCACACGGTCCGCGCTTCGCTGGAAGACCTGGG < 41bp 0.737521356210723 0.346866670601109 0.3650468 0.1526216 prediction 0.475042712421446 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499469 chr19:18499472 synonymous SNV . 0 24 hm5C_associated_SNPs_70569 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:18499426-18499492
64251 chr8 145608403 145608403 1 + G A rs546211953 145608400 + 145608380 145608420 41 GGGAGAAGAGGAGGATGCGGCTCGTGGTGGATGGCATGGGG GGGAGAAGAGGAGGATGCGGCTCATGGTGGATGGCATGGGG < 41bp 0.75058213919435 0.513062273815921 0.5776887 0.48437577 prediction 0.475039730756858 Functional Loss - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145608400 chr8:145608403 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_70570 0 0 1 GEMIN5 POSTAR2 ENCODE chr8:145608399-145608459
64251 chrX 44922802 44922802 1 + C T BLCA 44922800 + 44922780 44922820 41 GACCAGAGTGCCTAGCGTCTCTCAGCCTGGAGTCCGTCCTG GACCAGAGTGCCTAGCGTCTCTTAGCCTGGAGTCCGTCCTG < 41bp 0.737514842798454 0.465731191510002 0.29916993 0.18684423 prediction 0.475029685596907 Functional Loss - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44922800 chrX:44922802 stopgain 1.000 1 23 hm5C_associated_SNPs_70575 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:44922769-44922802
64251 chr8 56863306 56863306 1 + T C STAD 56863305 + 56863285 56863325 41 TTTGGCACCAGGAAATAGCGCTGGAGCTTTCCTTATTAGAG TTTGGCACCAGGAAATAGCGCCGGAGCTTTCCTTATTAGAG < 41bp 0.749432022729826 0.511919863734277 0.2640639 0.86770993 prediction 0.475024317991099 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56863305 chr8:56863306 synonymous SNV . 0 22 hm5C_associated_SNPs_70577 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:56863283-56863321
64251 chr6 100062437 100062437 1 + C T UCEC 100062435 + 100062415 100062455 41 GCGGCAAGGTACTTGTGCGCCGCCGGGACCTGGAGCGACAT GCGGCAAGGTACTTGTGCGCCGTCGGGACCTGGAGCGACAT < 41bp 0.766513238055127 0.529003496575211 0.27917433 0.13872483 prediction 0.475019482959832 Functional Loss - PRDM13 ENSG00000112238 CDS Human protein_coding chr6:100062435 chr6:100062437 synonymous SNV . 0 23 hm5C_associated_SNPs_70578 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:100062423-100062451
64251 chr1 55182315 55182315 1 + G T UCEC 55182313 + 55182293 55182333 41 ATTTATGTCGAGAGCGCCATCAGAAATTGATCCCAGGGAGA ATTTATGTCGAGAGCGCCATCATAAATTGATCCCAGGGAGA < 41bp 0.737509174756834 0.391684187264238 0.37797147 0.06816515 prediction 0.475018349513668 Functional Loss - TTC4 ENSG00000243725;ENSG00000271723 CDS Human other chr1:55182313 chr1:55182315 stopgain 0.975 0 23 hm5C_associated_SNPs_70579 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:55182301-55182320
64251 chr17 40723569 40723569 1 + T C STAD 40723568 + 40723548 40723588 41 TCTGCTGCCCTCGCCAGACCCTGCGGGAGATTGTGATTGGC TCTGCTGCCCTCGCCAGACCCCGCGGGAGATTGTGATTGGC < 41bp 0.750281256377624 0.512773595359964 0.32021534 0.4034626 prediction 0.475015322035319 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40723568 chr17:40723569 nonsynonymous SNV 0.455 5 22 hm5C_associated_SNPs_70580 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:40723562-40723586
64251 chr15 67473779 67473779 1 + C T CESC 67473777 + 67473757 67473797 41 GAATGCAGCAGTGGAGCTGACACGGAGACACATCGGTATGG GAATGCAGCAGTGGAGCTGACATGGAGACACATCGGTATGG < 41bp 0.809723619694715 0.572221246982606 0.74474996 0.5182241 prediction 0.475004745424218 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67473777 chr15:67473779 nonsynonymous SNV 0.015 5 23 hm5C_associated_SNPs_70582 2 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr15:67473754-67473792
64251 chr16 56871626 56871626 1 + C T COAD 56871624 + 56871604 56871644 41 AGGCTGAAGAACATGGCACTCTCCATTGCCGAACGGTAAGC AGGCTGAAGAACATGGCACTCTTCATTGCCGAACGGTAAGC < 41bp 0.859192960877845 0.621692845677893 0.9665406 0.81824636 prediction 0.475000230399905 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56871624 chr16:56871626 nonsynonymous SNV 0.918 2 23 hm5C_associated_SNPs_70584 0 0 2 YBX3 POSTAR2 ENCODE chr16:56871610-56871638
64251 chr16 29827702 29827702 1 + G C rs530483306 29827698 + 29827678 29827718 41 GTGGGGACTGAGCGCCCCCTCCCGGGGACGGGCGGTCTGGC GTGGGGACTGAGCGCCCCCTCCCGCGGACGGGCGGTCTGGC < 41bp 0.77369422388034 0.536201864065141 0.86861074 0.63766825 prediction 0.474984719630397 Functional Loss - PAGR1 ENSG00000261962 ncRNA_intronic Human other chr16:29827698 chr16:29827702 . . 0 25 hm5C_associated_SNPs_70587 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr16:29827683-29827732
64251 chr5 145838644 145838644 1 + G A PRAD 145838641 + 145838621 145838661 41 GCCCAGGCTCAGGCTCAGGCCCAGGCCCAGGCCCAGGCCCA GCCCAGGCTCAGGCTCAGGCCCAAGCCCAGGCCCAGGCCCA < 41bp 0.76132779987942 0.523837440623735 0.31621122 0.24163401 prediction 0.47498071851137 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838641 chr5:145838644 synonymous SNV . 0 24 hm5C_associated_SNPs_70590 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378376 chr5:145838640-145838660
64251 chr22 24837383 24837383 1 + G A LIHC 24837380 + 24837360 24837400 41 CAGACGTGGAGCTCCTTAGCCATGAGCTCAAGGGAGTGTGC CAGACGTGGAGCTCCTTAGCCATAAGCTCAAGGGAGTGTGC < 41bp 0.753078843629017 0.515589437522901 0.3932696 0.6532089 prediction 0.474978812212231 Functional Loss - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24837380 chr22:24837383 nonsynonymous SNV 0.798 0 24 hm5C_associated_SNPs_70591 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr22:24837363-24837388
64251 chr8 41363446 41363446 1 + C T UCEC 41363444 + 41363424 41363464 41 TGTCAGGTTCTGAAGAAAGTCTCCAAATACATTCAAGAGCA TGTCAGGTTCTGAAGAAAGTCTTCAAATACATTCAAGAGCA < 41bp 0.863472487640309 0.625986332911437 0.9655677 0.8098993 prediction 0.474972309457744 Functional Loss - GOLGA7 ENSG00000147533 CDS Human protein_coding chr8:41363444 chr8:41363446 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_70594 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:41363442-41363469
64251 chr16 67912726 67912726 1 + G T SARC 67912724 + 67912704 67912744 41 TCAGCAGAATACCTGATTCTCAGCGATGTGCAACGGAAGGT TCAGCAGAATACCTGATTCTCATCGATGTGCAACGGAAGGT < 41bp 0.737480797660681 0.388459514434711 0.8327826 0.23133329 prediction 0.474961595321363 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67912724 chr16:67912726 nonsynonymous SNV 0.985 3 23 hm5C_associated_SNPs_70595 0 0 1 PPIG POSTAR2 ENCODE chr16:67912666-67912743
64251 chr18 76829437 76829437 1 + G C rs116790577 76829436 + 76829416 76829456 41 GGACCAGATCCCGCTTTACCCGGTGCGTAGCGCAGCGGCGG GGACCAGATCCCGCTTTACCCCGTGCGTAGCGCAGCGGCGG < 41bp 0.737468308414279 0.44018062020173 0.8761467 0.3356827 prediction 0.474936616828557 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:76829436 chr18:76829437 synonymous SNV . 0 22 hm5C_associated_SNPs_70598 0 0 3 GRWD1 POSTAR2 ENCODE chr18:76829400-76829498
64251 chr19 58152547 58152547 1 + G T LUAD 58152544 + 58152524 58152564 41 AGTGGAAAAAGTCATCACAACTGGGGAAAATGCAGTAAAGC AGTGGAAAAAGTCATCACAACTGTGGAAAATGCAGTAAAGC < 41bp 0.737467605789277 0.35421280166711 0.41933385 0.08647734 prediction 0.474935211578555 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58152544 chr19:58152547 nonsynonymous SNV 0.072 0 24 hm5C_associated_SNPs_70599 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58152528-58152609
64251 chr11 118886117 118886117 1 + C T rs10111 118886115 + 118886095 118886135 41 GCTGGCTGCCCTCTTTTGGCCGCGTCTGGAATAATGGACGC GCTGGCTGCCCTCTTTTGGCCGTGTCTGGAATAATGGACGC < 41bp 0.807136985181286 0.569682291691136 0.20931026 0.1423817 prediction 0.4749093869803 Functional Loss - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118886115 chr11:118886117 synonymous SNV . 0 23 hm5C_associated_SNPs_70602 0 0 7 BUD13 POSTAR2 ENCODE chr11:118886091-118886150
64251 chr18 72346737 72346737 1 + C T SKCM 72346735 + 72346715 72346755 41 GACACCTGTGCCCTGTGACGCTCGATGGGGAGCGCTCGGCT GACACCTGTGCCCTGTGACGCTTGATGGGGAGCGCTCGGCT < 41bp 0.737454122522589 0.475881174046597 0.3870852 0.30772862 prediction 0.474908245045178 Functional Loss - ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72346735 chr18:72346737 synonymous SNV . 0 23 hm5C_associated_SNPs_70603 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:72346715-72346738
64251 chr22 35719820 35719820 1 + G T LUSC 35719818 + 35719798 35719838 41 CTGTGGGCACTGACTCCAGCCAGCAAGAGGACTCTGGCCAG CTGTGGGCACTGACTCCAGCCATCAAGAGGACTCTGGCCAG < 41bp 0.737452957245097 0.404659807593105 0.23266274 0.1410605 prediction 0.474905914490193 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719818 chr22:35719820 nonsynonymous SNV 0.009 0 23 hm5C_associated_SNPs_70604 0 0 1 BUD13 POSTAR2 ENCODE chr22:35719749-35719864
64251 chrX 44928977 44928977 1 + G T LUSC 44928974 + 44928954 44928994 41 TGCCTAGCAATTCAGTAACACAGGGGGCTGCTCTCAATCAC TGCCTAGCAATTCAGTAACACAGTGGGCTGCTCTCAATCAC < 41bp 0.737451216951384 0.355671179770628 0.8596215 0.14995557 prediction 0.474902433902767 Functional Loss - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44928974 chrX:44928977 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_70605 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:44928960-44929000
64251 chr9 35606932 35606932 1 + G T SARC 35606930 + 35606910 35606950 41 CCCTGGACATTGCCCGAGGCCTGCGGTACCTGCACTCCAAA CCCTGGACATTGCCCGAGGCCTTCGGTACCTGCACTCCAAA < 41bp 0.73744980876202 0.395577393939806 0.84499454 0.48416218 prediction 0.474899617524041 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35606930 chr9:35606932 synonymous SNV . 0 23 hm5C_associated_SNPs_70606 0 0 1 AARS POSTAR2 ENCODE chr9:35606922-35606967
64251 chr10 104309846 104309846 1 + G T HNSC 104309843 + 104309823 104309863 41 AGAGTTAATGCAGGGCTTGGCACGATACGTGTTCCAGTCAG AGAGTTAATGCAGGGCTTGGCACTATACGTGTTCCAGTCAG < 41bp 0.922939167311189 0.685490530973834 0.4765717 0.24030429 prediction 0.47489727267471 Functional Loss - SUFU ENSG00000107882 CDS Human protein_coding chr10:104309843 chr10:104309846 nonsynonymous SNV 0.928 5 24 hm5C_associated_SNPs_70608 0 0 1 GRWD1 POSTAR2 ENCODE chr10:104309753-104309864
64251 chr6 126342348 126342348 1 + C T UCEC 126342346 + 126342326 126342366 41 CTTGGCACCCTTGCCTGGAACTCGTTAGCAACTGCGAGCAG CTTGGCACCCTTGCCTGGAACTTGTTAGCAACTGCGAGCAG < 41bp 0.825045384944895 0.587603485786189 0.2420268 0.26219568 prediction 0.474883798317411 Functional Loss - TRMT11 ENSG00000066651 CDS Human protein_coding chr6:126342346 chr6:126342348 synonymous SNV . 0 23 hm5C_associated_SNPs_70613 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:126342314-126342361
64251 chr17 53398228 53398228 1 + C T UCEC 53398226 + 53398206 53398246 41 TTGCCAAGTATGAGGCCAGGCACGGGCCCCTGTAGGATGGC TTGCCAAGTATGAGGCCAGGCATGGGCCCCTGTAGGATGGC < 41bp 0.737424313853636 0.469723120091173 0.14192209 0.17658904 prediction 0.474848627707272 Functional Loss - HLF ENSG00000108924 CDS Human protein_coding chr17:53398226 chr17:53398228 synonymous SNV . 0 23 hm5C_associated_SNPs_70617 0 0 1 SRSF1 POSTAR2 ENCODE chr17:53398103-53398241
64251 chr2 220046873 220046873 1 + C T STAD 220046871 + 220046851 220046891 41 CTGTCAAGGCAAGCCCTGGACTCGGAGGAAGAGGAAGAGGA CTGTCAAGGCAAGCCCTGGACTTGGAGGAAGAGGAAGAGGA < 41bp 0.737423125679373 0.457449934811062 0.23911473 0.18689245 prediction 0.474846251358746 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046871 chr2:220046873 nonsynonymous SNV 0.758 0 23 hm5C_associated_SNPs_70618 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220046834-220046884
64251 chr20 36012632 36012632 1 + G A BLCA 36012629 + 36012609 36012649 41 TGGAGCCCGCCGAGAACGTGCACGGCGCTGGCGGGGGCGCT TGGAGCCCGCCGAGAACGTGCACAGCGCTGGCGGGGGCGCT < 41bp 0.762405596793398 0.524988387230873 0.3556283 0.22423092 prediction 0.474834419125051 Functional Loss - SRC ENSG00000197122 CDS Human protein_coding chr20:36012629 chr20:36012632 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_70621 0 0 1 PPIG POSTAR2 ENCODE chr20:36012564-36012644
64251 chr1 151139648 151139648 1 + A C COAD 151139644 + 151139624 151139664 41 AGCCGGGAAAGGAAAGAAAGCAGAATCCAAAACATCAGAAT AGCCGGGAAAGGAAAGAAAGCAGACTCCAAAACATCAGAAT < 41bp 0.737414943472675 0.321151569919762 0.23018834 0.15288445 prediction 0.47482988694535 Functional Loss - SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151139644 chr1:151139648 nonsynonymous SNV 0.957 1 25 hm5C_associated_SNPs_70622 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:151139624-151139662
64251 chr2 36691738 36691738 1 + A C ESCA 36691734 + 36691714 36691754 41 TGTGAGGTGGGATCCACTCCCCGCATAGTCTCTCGTGGCGA TGTGAGGTGGGATCCACTCCCCGCCTAGTCTCTCGTGGCGA < 41bp 0.737414021388903 0.319742628675525 0.105745465 0.028832823 prediction 0.474828042777807 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36691734 chr2:36691738 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_70623 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:36691738-36691739
64251 chr16 30092622 30092622 1 + G A UCEC 30092619 + 30092599 30092639 41 AGCAACGTGCAGAGGGTGGACTCGCCAGTCACAGTGAGTAC AGCAACGTGCAGAGGGTGGACTCACCAGTCACAGTGAGTAC < 41bp 0.737400031475818 0.498604250996057 0.21172035 0.044093728 prediction 0.474800062951637 Functional Loss - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30092619 chr16:30092622 synonymous SNV . 0 24 hm5C_associated_SNPs_70632 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:30092583-30092634
64251 chr17 20135688 20135688 1 + G T PAAD 20135686 + 20135666 20135706 41 CTGGGGGATGTGCAGGGCCACGGCAGGGTGGTCACCAGCAG CTGGGGGATGTGCAGGGCCACGTCAGGGTGGTCACCAGCAG < 41bp 0.884722988530249 0.64732509296467 0.75422776 0.57580906 prediction 0.474795791131157 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135686 chr17:20135688 nonsynonymous SNV 0.977 1 23 hm5C_associated_SNPs_70634 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:20135660-20135688
64251 chr19 50285820 50285820 1 + G A UCEC 50285817 + 50285797 50285837 41 TTCATTTCTGTGCTGGTGAACTCGAACTCGGAGCTGATCCG TTCATTTCTGTGCTGGTGAACTCAAACTCGGAGCTGATCCG < 41bp 0.738322291509628 0.500927722470907 0.44997504 0.49118426 prediction 0.474789138077442 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285817 chr19:50285820 synonymous SNV . 0 24 hm5C_associated_SNPs_70635 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:50285797-50285839
64251 chrX 13707366 13707366 1 + G T rs571369454 13707363 + 13707343 13707383 41 CTGTCCTCATTGCGCCCAGACGGGCCGGCCCAGAGCTCCCG CTGTCCTCATTGCGCCCAGACGGTCCGGCCCAGAGCTCCCG < 41bp 0.73739087636607 0.381299224564 0.8098475 0.2714395 prediction 0.474781752732141 Functional Loss - RAB9A ENSG00000123595 UTR5 Human protein_coding chrX:13707363 chrX:13707366 . . 0 24 hm5C_associated_SNPs_70636 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chrX:13707365-13707366
64251 chr1 46726526 46726526 1 + G C LUAD 46726525 + 46726505 46726545 41 CATTGATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAAG CATTGATGTGGACACTTTTACCCCAGAGTCCAGAGTGCAAG < 41bp 0.873623210748802 0.636238040562901 0.27749538 0.2839142 prediction 0.474770340371802 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46726525 chr1:46726526 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_70637 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:46726520-46726540
64251 chr4 20599946 20599946 1 + C T GBM 20599944 + 20599924 20599964 41 AAGGGTGACAAAGACCATATCGCGGTAGAACTCTATCGGGG AAGGGTGACAAAGACCATATCGTGGTAGAACTCTATCGGGG < 41bp 0.80491934900611 0.567540334800621 0.48472825 0.80164206 prediction 0.474758028410978 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20599944 chr4:20599946 nonsynonymous SNV 0.387 2 23 hm5C_associated_SNPs_70639 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:20599941-20599969
64251 chr10 5567333 5567333 1 + G A SKCM 5567330 + 5567310 5567350 41 GAGGCCTTCCGCGTGTTCGACAAGGACGGCAACGGCTTCGT GAGGCCTTCCGCGTGTTCGACAAAGACGGCAACGGCTTCGT < 41bp 0.746499376430283 0.509122213604759 0.85455275 0.41093028 prediction 0.474754325651047 Functional Loss - CALML3 ENSG00000178363 CDS Human protein_coding chr10:5567330 chr10:5567333 synonymous SNV . 0 24 hm5C_associated_SNPs_70640 0 0 1 METTL3 POSTAR2 GSE46705,GSM1135006 chr10:5567323-5567340
64251 chr6 13597207 13597207 1 + T C COAD 13597206 + 13597186 13597226 41 TTACTTCAGTGCTCCAGAACCTGGAACTCAAGATGCCAGCA TTACTTCAGTGCTCCAGAACCCGGAACTCAAGATGCCAGCA < 41bp 0.765915490400266 0.528538925084472 0.8375852 0.8599442 prediction 0.474753130631588 Functional Loss - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13597206 chr6:13597207 synonymous SNV . 0 22 hm5C_associated_SNPs_70641 0 0 3 PPIG POSTAR2 ENCODE chr6:13597194-13597273
64251 chr16 4745097 4745097 1 + G C BLCA 4745096 + 4745076 4745116 41 AAGGTGCTCAACATGATGCCCGAGGAGAAGCTGGTTGAGGC AAGGTGCTCAACATGATGCCCCAGGAGAAGCTGGTTGAGGC < 41bp 0.737371391703174 0.436710954037302 0.75899386 0.38295227 prediction 0.474742783406348 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4745096 chr16:4745097 nonsynonymous SNV 0.986 0 22 hm5C_associated_SNPs_70643 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:4745080-4745100
64251 chr19 41703808 41703808 1 + G T LUAD 41703806 + 41703786 41703826 41 TCCAGGCGGAGGCCCGGTGTCTGGTGGAGACATTCCAGGGG TCCAGGCGGAGGCCCGGTGTCTTGTGGAGACATTCCAGGGG < 41bp 0.899519295348991 0.66214965323896 0.88928306 0.64325243 prediction 0.474739284220063 Functional Loss - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41703806 chr19:41703808 synonymous SNV . 0 23 hm5C_associated_SNPs_70644 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41703802-41703830
64251 chr17 7320448 7320448 1 + C T BRCA 7320446 + 7320426 7320466 41 CCCCACCTGCACAACCTGCACACGGAGCTCTTCACCACCAC CCCCACCTGCACAACCTGCACATGGAGCTCTTCACCACCAC < 41bp 0.738035107658944 0.500669729942563 0.058171093 0.06601286 prediction 0.474730755432763 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320446 chr17:7320448 nonsynonymous SNV 0.984 1 23 hm5C_associated_SNPs_70647 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7320402-7320455
64251 chr19 35741237 35741237 1 + G T GBM 35741235 + 35741215 35741255 41 CAGCTCCTGCCAGGGCCATCCAGGTGACCGTGTCCAACCCC CAGCTCCTGCCAGGGCCATCCATGTGACCGTGTCCAACCCC < 41bp 0.737365009775245 0.373405155126175 0.92379117 0.5091785 prediction 0.47473001955049 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35741235 chr19:35741237 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_70648 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:35741220-35741240
64251 chr20 372148 372148 1 + T C STAD 372147 + 372127 372167 41 TCCGCCAGATGGCCACCGCCCTGGCGCACTGTCACCAGCAC TCCGCCAGATGGCCACCGCCCCGGCGCACTGTCACCAGCAC < 41bp 0.765738051109626 0.528373872281471 0.18404904 0.5726119 prediction 0.474728357656309 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:372147 chr20:372148 nonsynonymous SNV 0.462 1 22 hm5C_associated_SNPs_70649 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:372122-372157
64251 chr2 139322555 139322555 1 + G T LUAD 139322552 + 139322532 139322572 41 GGGTGTAAAGATGGGAAAAACTGGAACAGCAAGTAAGATGA GGGTGTAAAGATGGGAAAAACTGTAACAGCAAGTAAGATGA < 41bp 0.907123296979632 0.669768269971124 0.60917383 0.32162118 prediction 0.474710054017015 Functional Loss - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139322552 chr2:139322555 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_70652 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:139322537-139322562
64251 chr14 78374175 78374175 1 + G A HNSC 78374172 + 78374152 78374192 41 CGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGAT CGAATCCACTGGGACCTGTCCACAGAGCGGGTCCTCCTGAT < 41bp 0.75123999043314 0.513885913428122 0.8870867 0.1329081 prediction 0.474708154010035 Functional Loss - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78374172 chr14:78374175 synonymous SNV . 0 24 hm5C_associated_SNPs_70653 0 0 1 TBRG4 POSTAR2 ENCODE chr14:78374169-78374202
64251 chrX 129480547 129480547 1 + C T UCEC 129480545 + 129480525 129480565 41 CCCTGTGGACCTTACCAAAACACGACTTCAGGTTCAAGGCC CCCTGTGGACCTTACCAAAACATGACTTCAGGTTCAAGGCC < 41bp 0.835912190057627 0.598563798949901 0.0986352 0.08701208 prediction 0.474696782215452 Functional Loss - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129480545 chrX:129480547 stopgain 0.995 1 23 hm5C_associated_SNPs_70657 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129480519-129480548
64251 chr7 98984375 98984375 1 + G T UCEC 98984372 + 98984352 98984392 41 AAGAGCGGTGCCAAATGGACCAAGGTGCACGAGCTCAAGGA AAGAGCGGTGCCAAATGGACCAATGTGCACGAGCTCAAGGA < 41bp 0.737346906067433 0.333761832054186 0.3731488 0.03918603 prediction 0.474693812134865 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98984372 chr7:98984375 nonsynonymous SNV 0.673 1 24 hm5C_associated_SNPs_70660 0 0 5 DDX24 POSTAR2 ENCODE chr7:98984307-98984407
64251 chr9 133493282 133493282 1 + G T UCEC 133493280 + 133493260 133493300 41 CTGGAGATGCATTTAAAGTACAGGTAGGAAAGTGCCATGGG CTGGAGATGCATTTAAAGTACATGTAGGAAAGTGCCATGGG < 41bp 0.737345928814444 0.390483588558239 0.40645024 0.2922169 prediction 0.474691857628888 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133493280 chr9:133493282 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_70662 0 0 5 DDX24 POSTAR2 ENCODE chr9:133493245-133493283
64251 chr10 99519753 99519753 1 + G A rs4244329 99519750 + 99519730 99519770 41 GCCCCAATAGCTGGACAGACCTCGGCCTCCCCTCGAAGACA GCCCCAATAGCTGGACAGACCTCAGCCTCCCCTCGAAGACA < 41bp 0.755530044263046 0.51819360807541 0.07289636 0.010053575 prediction 0.474672872375272 Functional Loss - ZFYVE27 ENSG00000155256 UTR3 Human protein_coding chr10:99519750 chr10:99519753 . . 0 24 hm5C_associated_SNPs_70667 1 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:99519730-99519763
64251 chr1 117634475 117634475 1 + C T LUSC 117634473 + 117634453 117634493 41 GGGTCTGAGGAGCCTAGACACTCGGAGGCAGCAGACTCACC GGGTCTGAGGAGCCTAGACACTTGGAGGCAGCAGACTCACC < 41bp 0.818365588375924 0.581032170265893 0.057745278 0.2654761 prediction 0.474666836220061 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117634473 chr1:117634475 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_70668 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:117634471-117634495
64251 chr16 1741961 1741961 1 + G A UCEC 1741958 + 1741938 1741978 41 GTCTCCGGTCACTGCCACTTCACGCTTGGCACACCCAAACA GTCTCCGGTCACTGCCACTTCACACTTGGCACACCCAAACA < 41bp 0.759053534685122 0.521722215341147 0.049504757 0.028517067 prediction 0.474662638687948 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1741958 chr16:1741961 nonsynonymous SNV 0.112 1 24 hm5C_associated_SNPs_70670 0 0 17 EIF3B POSTAR2 GSE65004,GSM1585669 chr16:1741927-1741961
64251 chr16 84779039 84779039 1 + G A UCEC 84779036 + 84779016 84779056 41 TAGACTTGGACCCAACCAAACCCGAGAGTGCATCACCTCCT TAGACTTGGACCCAACCAAACCCAAGAGTGCATCACCTCCT < 41bp 0.75646600194997 0.519136629129108 0.16984978 0.09926778 prediction 0.474658745641723 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84779036 chr16:84779039 nonsynonymous SNV 0.004 1 24 hm5C_associated_SNPs_70671 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:84778999-84779043
64251 chr20 18462420 18462420 1 + C T LIHC 18462418 + 18462398 18462438 41 GTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACC GTCAATCCAATCATCCCTCCCATAGGTTTGGTCCGGGCACC < 41bp 0.737327099575899 0.461091769997033 0.08713862 0.16118807 prediction 0.474654199151799 Functional Loss - POLR3F ENSG00000132664 CDS Human protein_coding chr20:18462418 chr20:18462420 nonsynonymous SNV 0.687 2 23 hm5C_associated_SNPs_70672 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr20:18462388-18462420
64251 chr9 32552402 32552402 1 + A C rs199937352 32552398 + 32552378 32552418 41 ACTGTAAGGCCCGCAGCTCCCGCCAGCTCCCGCGGACTGCT ACTGTAAGGCCCGCAGCTCCCGCCCGCTCCCGCGGACTGCT < 41bp 0.926531619676359 0.689208748090102 0.3737465 0.13278824 prediction 0.474645743172513 Functional Loss - SMIM27 ENSG00000235453 ncRNA_exonic Human protein_coding chr9:32552398 chr9:32552402 . . 0 25 hm5C_associated_SNPs_70675 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:32552381-32552428
64251 chr2 99170940 99170940 1 + C T STAD 99170938 + 99170918 99170958 41 CTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGTGAGT CTTCCCTGCAGGTGGACTGGCATGAGGAGGAGTGGGTGAGT < 41bp 0.822837940145251 0.585515438052307 0.8772558 0.9097295 prediction 0.474645004185888 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99170938 chr2:99170940 synonymous SNV . 0 23 hm5C_associated_SNPs_70676 0 0 4 BUD13 POSTAR2 ENCODE chr2:99170861-99170950
64251 chr22 18570854 18570854 1 + A C rs561936774 18570853 + 18570833 18570873 41 CGTGACTGAGGGTCCCTGCGCACCACAGCCTCTCTGCTCCT CGTGACTGAGGGTCCCTGCGCCCCACAGCCTCTCTGCTCCT < 41bp 0.763376967685738 0.526054877534661 0.049468756 0.02826181 prediction 0.474644180302154 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18570853 chr22:18570854 . . 0 22 hm5C_associated_SNPs_70677 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:18570814-18570856
64251 chr10 99211881 99211881 1 + C T KIRC 99211879 + 99211859 99211899 41 CTGGTGATCGTGCTGACAGGCTCCATTGTAGCTATCGCCTA CTGGTGATCGTGCTGACAGGCTTCATTGTAGCTATCGCCTA < 41bp 0.852673726072457 0.615351767674144 0.9054359 0.10715255 prediction 0.474643916796627 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211879 chr10:99211881 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_70678 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr10:99211852-99211890
64251 chr7 101091009 101091009 1 + C T UCEC 101091007 + 101090987 101091027 41 ACCTACAGAGTGTCCTACCGCACGGTGACGGTGCTGGAGTG ACCTACAGAGTGTCCTACCGCATGGTGACGGTGCTGGAGTG < 41bp 0.810841916906465 0.573523181184636 0.3448866 0.32186127 prediction 0.474637471443658 Functional Loss - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101091007 chr7:101091009 nonsynonymous SNV 0.652 2 23 hm5C_associated_SNPs_70679 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:101090992-101091028
64251 chr3 158539834 158539834 1 + G T UCEC 158539832 + 158539812 158539852 41 TGGGCTCCTGGTGGATAAAACAGGGAAGAACATCATCTGGG TGGGCTCCTGGTGGATAAAACATGGAAGAACATCATCTGGG < 41bp 0.896575244982151 0.659256605868147 0.9030546 0.504073 prediction 0.474637278228009 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158539832 chr3:158539834 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_70680 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:158539810-158539839
64251 chr5 157182210 157182210 1 + C T UCEC 157182208 + 157182188 157182228 41 GGATTACCAGCAGGTATTCACTCGACACATAAATCAGATTT GGATTACCAGCAGGTATTCACTTGACACATAAATCAGATTT < 41bp 0.82167235557502 0.584360380784803 0.90143436 0.3291974 prediction 0.474623949580434 Functional Loss - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157182208 chr5:157182210 stopgain 1.000 1 23 hm5C_associated_SNPs_70683 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:157182189-157182210
64251 chr12 122398617 122398617 1 + G T UCEC 122398614 + 122398594 122398634 41 GTCTCCTGTTTGGGGTTTACCTGGACAGCAATGAGCCTAGA GTCTCCTGTTTGGGGTTTACCTGTACAGCAATGAGCCTAGA < 41bp 0.917710102194239 0.680409783733605 0.22211048 0.067154616 prediction 0.474600636921269 Functional Loss - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122398614 chr12:122398617 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_70687 0 0 1 PRPF8 POSTAR2 ENCODE chr12:122398615-122398732
64251 chr17 37814947 37814947 1 + C T rs200875771 37814945 + 37814925 37814965 41 GCTGCTAGGGTGTAACTGTCCTCGGTCCGGGACCGAGTCTG GCTGCTAGGGTGTAACTGTCCTTGGTCCGGGACCGAGTCTG < 41bp 0.753511776111169 0.516216306722863 0.26462126 0.19321105 prediction 0.474590938776612 Functional Loss - STARD3 ENSG00000131748 intronic Human protein_coding chr17:37814945 chr17:37814947 . . 0 23 hm5C_associated_SNPs_70690 0 0 11 BUD13 POSTAR2 ENCODE chr17:37814894-37814997
64251 chr1 210012330 210012330 1 + G T LUAD 210012328 + 210012308 210012348 41 ATCAGCCTCCTCGAGGGTGACAGCAAGAAGAAAATCATTGT ATCAGCCTCCTCGAGGGTGACATCAAGAAGAAAATCATTGT < 41bp 0.737295184555554 0.394490933862533 0.5515227 0.17438641 prediction 0.474590369111108 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012328 chr1:210012330 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_70691 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210012301-210012330
64251 chr1 156838432 156838432 1 + C T rs55909005 156838430 + 156838410 156838450 41 ACAGAGCTGGAGCAGTCAGCCACGGTGATGGTGAGAAGACC ACAGAGCTGGAGCAGTCAGCCATGGTGATGGTGAGAAGACC < 41bp 0.772725686733337 0.535431263807032 0.5936566 0.37014484 prediction 0.47458884585261 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156838430 chr1:156838432 nonsynonymous SNV 0.856 2 23 hm5C_associated_SNPs_70693 3 0 1 DDX24 POSTAR2 ENCODE chr1:156838341-156838432
64251 chr12 132237743 132237743 1 + G A BRCA 132237740 + 132237720 132237760 41 CTGCCTGGCGCCGCCCCCTCCCGGAATCGACGTGACTACTT CTGCCTGGCGCCGCCCCCTCCCGAAATCGACGTGACTACTT < 41bp 0.751384536817922 0.51409120891423 0.7793059 0.250187 prediction 0.474586655807385 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132237740 chr12:132237743 nonsynonymous SNV 0.075 4 24 hm5C_associated_SNPs_70695 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132237718-132237751
64251 chr12 8926333 8926333 1 + A C LUSC 8926332 + 8926312 8926352 41 AAGCTCCCAGGGGGCCTGTTCAACATGAACCAGCTGCTAGC AAGCTCCCAGGGGGCCTGTTCCACATGAACCAGCTGCTAGC < 41bp 0.740257635438311 0.502967995537645 0.12674683 0.17232925 prediction 0.474579279801333 Functional Loss - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926332 chr12:8926333 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_70698 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:8926312-8926350
64251 chr20 10603428 10603428 1 + G A COAD 10603425 + 10603405 10603445 41 CAAGGAGGAGGAATGATGGTCAGGCTTCCTCCAGTCCCCCA CAAGGAGGAGGAATGATGGTCAGACTTCCTCCAGTCCCCCA < 41bp 0.743030523043178 0.50574273317083 0.92313313 0.3744241 prediction 0.474575579744696 Functional Loss - SLX4IP ENSG00000149346 CDS Human protein_coding chr20:10603425 chr20:10603428 nonsynonymous SNV 0.149 0 24 hm5C_associated_SNPs_70700 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr20:10603428-10603449
64251 chr8 94935676 94935676 1 + A C GBM 94935675 + 94935655 94935695 41 ACAGATGCATGGCCTTTTAACAGAAAGGAGAACCAAAATGT ACAGATGCATGGCCTTTTAACCGAAAGGAGAACCAAAATGT < 41bp 0.778691318906587 0.541405707611582 0.82398325 0.4918986 prediction 0.474571222590009 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935675 chr8:94935676 synonymous SNV . 0 22 hm5C_associated_SNPs_70703 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:94935668-94935694
64251 chr17 6023840 6023840 1 + G A PAAD 6023837 + 6023817 6023857 41 AACAACAAGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTC AACAACAAGGAGGGCAGCTTCCGACGGCGCGGCCGGCGCTC < 41bp 0.737285042961453 0.495781940732884 0.93694305 0.9110054 prediction 0.474570085922907 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023837 chr17:6023840 synonymous SNV . 0 24 hm5C_associated_SNPs_70704 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6023833-6023862
64251 chrX 129147564 129147564 1 + G A UCEC 129147561 + 129147541 129147581 41 GTGCCCACGCTCATCTCTGACTCGAACCCCCTTTCTGTTTC GTGCCCACGCTCATCTCTGACTCAAACCCCCTTTCTGTTTC < 41bp 0.766035778025318 0.528755912060699 0.36926764 0.24966198 prediction 0.474559731929239 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147561 chrX:129147564 synonymous SNV . 0 24 hm5C_associated_SNPs_70706 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chrX:129147549-129147577
64251 chr1 165620324 165620324 1 + C T CESC 165620322 + 165620302 165620342 41 ATTCAGCGAGCCCACCAGAACACGTGAGTGTCGGCCCTGCC ATTCAGCGAGCCCACCAGAACATGTGAGTGTCGGCCCTGCC < 41bp 0.810811189697203 0.573539064822275 0.5748525 0.365093 prediction 0.474544249749856 Functional Loss - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165620322 chr1:165620324 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_70713 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:165620301-165620365
64251 chr12 6646556 6646556 1 + G A OV 6646553 + 6646533 6646573 41 TTTGGTATCGTGGAAGGACTCATGGTATGAGAGCTGGGGAA TTTGGTATCGTGGAAGGACTCATAGTATGAGAGCTGGGGAA < 41bp 0.755268925587808 0.51800647800541 0.55893725 0.19700518 prediction 0.474524895164796 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646553 chr12:6646556 nonsynonymous SNV 0.956 2 24 hm5C_associated_SNPs_70714 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:6646549-6646569
64251 chr20 35833196 35833196 1 + C T UCEC 35833194 + 35833174 35833214 41 TTGTTGCTCGCCTGGATGAACTCGGGGGCGTGTATCTCCAG TTGTTGCTCGCCTGGATGAACTTGGGGGCGTGTATCTCCAG < 41bp 0.842939309554703 0.605682018034695 0.52136993 0.62498 prediction 0.474514583040016 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35833194 chr20:35833196 synonymous SNV . 0 23 hm5C_associated_SNPs_70719 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:35833180-35833220
64251 chr3 32927506 32927506 1 + G A COAD 32927503 + 32927483 32927523 41 GTGCAGTCGGAGGTCAAAGCCGTGACGGCGAGGCATAAGAA GTGCAGTCGGAGGTCAAAGCCGTAACGGCGAGGCATAAGAA < 41bp 0.73725195746847 0.494157448992598 0.35743144 0.33756527 prediction 0.47450391493694 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32927503 chr3:32927506 synonymous SNV . 0 24 hm5C_associated_SNPs_70723 0 0 4 BUD13 POSTAR2 ENCODE chr3:32927383-32927519
64251 chr11 68703970 68703970 1 + G A rs111366439 68703967 + 68703947 68703987 41 CAGGGACCTGCTACGTCCACCAGGACCGGAAGCCAGCGGCA CAGGGACCTGCTACGTCCACCAGAACCGGAAGCCAGCGGCA < 41bp 0.780118124205344 0.542872374939529 0.90034324 0.8475996 prediction 0.47449149853163 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68703967 chr11:68703970 synonymous SNV . 0 24 hm5C_associated_SNPs_70726 1 0 1 PPIG POSTAR2 ENCODE chr11:68703957-68704004
64251 chr9 77745531 77745531 1 + G T GBM 77745529 + 77745509 77745549 41 TGGAAAGGCACCTCCAAAGGCAGGACTGGACTAATTCCAAG TGGAAAGGCACCTCCAAAGGCATGACTGGACTAATTCCAAG < 41bp 0.894593413535688 0.657350026331259 0.15232718 0.053881884 prediction 0.474486774408858 Functional Loss - OSTF1 ENSG00000134996 CDS Human protein_coding chr9:77745529 chr9:77745531 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_70728 0 0 3 RBM15 POSTAR2 ENCODE chr9:77745488-77745531
64251 chr7 75615286 75615286 1 + C T rs370645073 75615284 + 75615264 75615304 41 CTGTACTACGGCTGCCGCCGCTCGGATGAGGACTACCTGTA CTGTACTACGGCTGCCGCCGCTTGGATGAGGACTACCTGTA < 41bp 0.798966874587496 0.561730066556901 0.3989119 0.43534636 prediction 0.474473616061189 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75615284 chr7:75615286 nonsynonymous SNV 0.166 1 23 hm5C_associated_SNPs_70731 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:75615267-75615302
64251 chrX 47104880 47104880 1 + T C UCEC 47104879 + 47104859 47104899 41 ACCCTGGAGAAGGAAAACCCCTGGTGAGGGGCCAGAGCGGG ACCCTGGAGAAGGAAAACCCCCGGTGAGGGGCCAGAGCGGG < 41bp 0.751899246840732 0.514677058226212 0.2984696 0.32511285 prediction 0.474444377229042 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47104879 chrX:47104880 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_70737 0 0 2 FXR2 POSTAR2 ENCODE chrX:47104800-47104884
64251 chr19 16198861 16198861 1 + G T UCEC 16198858 + 16198838 16198878 41 TAGCTCGTAAGCTGGTCATCCTGGAGGGTGAGCTGGAGAGG TAGCTCGTAAGCTGGTCATCCTGTAGGGTGAGCTGGAGAGG < 41bp 0.924522576401427 0.687304944686661 0.24516428 0.21084777 prediction 0.474435263429531 Functional Loss - TPM4 ENSG00000167460 CDS Human protein_coding chr19:16198858 chr19:16198861 stopgain 0.992 0 24 hm5C_associated_SNPs_70741 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:16198860-16198880
64251 chr1 45267395 45267395 1 + C T LUSC 45267393 + 45267373 45267413 41 GCCTCAAGTACTTGCACCAGCGCGGCATCTTGCACCGGGAC GCCTCAAGTACTTGCACCAGCGTGGCATCTTGCACCGGGAC < 41bp 0.737212746611726 0.484374728750961 0.6583807 0.4562934 prediction 0.474425493223453 Functional Loss - PLK3 ENSG00000173846 CDS Human protein_coding chr1:45267393 chr1:45267395 synonymous SNV . 0 23 hm5C_associated_SNPs_70746 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr1:45267384-45267414
64251 chr8 27362496 27362496 1 + A T KIRC 27362492 + 27362472 27362512 41 GGATTCACTACTGCCATCCTCACCAACACCTGGCTGGACGA GGATTCACTACTGCCATCCTCACCTACACCTGGCTGGACGA < 41bp 0.737211933385064 0.390229113133293 0.3306116 0.2130591 prediction 0.474423866770128 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27362492 chr8:27362496 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_70747 0 0 2 UCHL5 POSTAR2 ENCODE chr8:27362473-27362608
64251 chr8 27362494 27362494 1 + C T UCEC 27362492 + 27362472 27362512 41 GGATTCACTACTGCCATCCTCACCAACACCTGGCTGGACGA GGATTCACTACTGCCATCCTCATCAACACCTGGCTGGACGA < 41bp 0.737211933385064 0.446057731506717 0.3306116 0.15700555 prediction 0.474423866770128 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27362492 chr8:27362494 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_70748 0 0 2 UCHL5 POSTAR2 ENCODE chr8:27362473-27362608
64251 chrX 54837426 54837426 1 + G T GBM 54837423 + 54837403 54837443 41 ATCAAGGACTCGGTTGGCTGCTTGGGCCCGGAGAGCCTTGC ATCAAGGACTCGGTTGGCTGCTTTGGCCCGGAGAGCCTTGC < 41bp 0.737210081666829 0.342837981376196 0.10693976 0.07884079 prediction 0.474420163333659 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837423 chrX:54837426 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_70749 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:54837396-54837427
64251 chr1 162773287 162773287 1 + C T SKCM 162773285 + 162773265 162773305 41 TTTGACATATGGAATTCTGCCTCCGTTTATATGGACGCTGT TTTGACATATGGAATTCTGCCTTCGTTTATATGGACGCTGT < 41bp 0.737188733063368 0.44889558206637 0.06283596 0.043660402 prediction 0.474377466126736 Functional Loss - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162773285 chr1:162773287 nonsynonymous SNV 0.039 0 23 hm5C_associated_SNPs_70760 0 0 1 PRPF8 POSTAR2 ENCODE chr1:162773282-162773356
64251 chr17 40937388 40937388 1 + T C PRAD 40937387 + 40937367 40937407 41 GCGAGAAGCCGGGCCTCAAGCTCTGGCTGCGCATGGAGGAC GCGAGAAGCCGGGCCTCAAGCCCTGGCTGCGCATGGAGGAC < 41bp 0.737186818820433 0.48516360985785 0.2322805 0.16039541 prediction 0.474373637640866 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40937387 chr17:40937388 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_70761 0 0 5 BUD13 POSTAR2 ENCODE chr17:40937386-40937421
64251 chr7 75610444 75610444 1 + G A UCEC 75610441 + 75610421 75610461 41 TGGACAAGCGGCTGGAGCAGCTCGGCGCCCAGCGCATCTTT TGGACAAGCGGCTGGAGCAGCTCAGCGCCCAGCGCATCTTT < 41bp 0.766454947049231 0.529270548699341 0.37006187 0.20320028 prediction 0.474368796699779 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75610441 chr7:75610444 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_70762 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:75610428-75610452
64251 chr1 32655677 32655677 1 + C T UCEC 32655675 + 32655655 32655695 41 GGAAGAAGGTGTGCAGCGGGCCCGGGAGGAGGAGGAGAAGC GGAAGAAGGTGTGCAGCGGGCCTGGGAGGAGGAGGAGAAGC < 41bp 0.73717960102625 0.470578475112856 0.30322486 0.33267257 prediction 0.474359202052501 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32655675 chr1:32655677 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_70765 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32655657-32655692
64251 chr11 32610272 32610272 1 + T C KIRC 32610271 + 32610251 32610291 41 GTGAACGCCCGTCTCTGAGACTGCAGTTGTAAGTTAAGATC GTGAACGCCCGTCTCTGAGACCGCAGTTGTAAGTTAAGATC < 41bp 0.755866039700395 0.518686749599966 0.22756994 0.23285735 prediction 0.474358580200858 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32610271 chr11:32610272 nonsynonymous SNV 0.913 2 22 hm5C_associated_SNPs_70766 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:32610130-32610277
64251 chr11 34153078 34153078 1 + T C UCEC 34153077 + 34153057 34153097 41 CCTTGCCTGAAGCTTGTGAACTGTATCCTCCTCTGGGTTTC CCTTGCCTGAAGCTTGTGAACCGTATCCTCCTCTGGGTTTC < 41bp 0.737177654015974 0.48676580581838 0.3540128 0.3904156 prediction 0.474355308031949 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34153077 chr11:34153078 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_70768 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34152983-34153106
64251 chr6 35995941 35995941 1 + C T SKCM 35995939 + 35995919 35995959 41 CGGCTGCCGCTGGAAAATGTCTCAGGAGAGGCCCACGTTCT CGGCTGCCGCTGGAAAATGTCTTAGGAGAGGCCCACGTTCT < 41bp 0.737170053381689 0.479923213449145 0.016358912 0.040477723 prediction 0.474340106763378 Functional Loss - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:35995939 chr6:35995941 stopgain 0.998 1 23 hm5C_associated_SNPs_70769 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:35995938-35995977
64251 chr10 13684804 13684804 1 + G A rs11258493 13684801 + 13684781 13684821 41 GAGGAGGCTTCAGGCTCTCCCACGGGCAGTTTTTAGGGTGT GAGGAGGCTTCAGGCTCTCCCACAGGCAGTTTTTAGGGTGT < 41bp 0.737169113469086 0.498587233149986 0.8067167 0.4427272 prediction 0.474338226938173 Functional Loss - FRMD4A ENSG00000239665 intronic Human processed_transcript chr10:13684801 chr10:13684804 . . 0 24 hm5C_associated_SNPs_70770 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:13684779-13684809
64251 chr12 53677876 53677876 1 + G A BLCA 53677873 + 53677853 53677893 41 TCCTGGTGCTGAAGGGCGAGCTGGAGCTGGCCCGCAATGAC TCCTGGTGCTGAAGGGCGAGCTGAAGCTGGCCCGCAATGAC < 41bp 0.756835382815984 0.519669133231597 0.5218187 0.39977562 prediction 0.474332499168774 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53677873 chr12:53677876 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_70772 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53677852-53677890
64251 chr3 127981028 127981028 1 + C T GBM 127981026 + 127981006 127981046 41 AGCCGGGGGGACCAGAGGCCCCCGAAACTGAAGCTCCACAG AGCCGGGGGGACCAGAGGCCCCTGAAACTGAAGCTCCACAG < 41bp 0.737165864259804 0.471646315111383 0.84713364 0.8713206 prediction 0.474331728519608 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981026 chr3:127981028 synonymous SNV . 0 23 hm5C_associated_SNPs_70773 0 0 2 BUD13 POSTAR2 ENCODE chr3:127981000-127981039
64251 chr2 44079585 44079585 1 + C T LAML 44079583 + 44079563 44079603 41 GGGGGTTGTCGGGGGGTGAGCGCAGGAGAGTCAGCATTGGG GGGGGTTGTCGGGGGGTGAGCGTAGGAGAGTCAGCATTGGG < 41bp 0.791781497374236 0.554620707168233 0.9107728 0.9117591 prediction 0.474321580412008 Functional Loss - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44079583 chr2:44079585 synonymous SNV . 0 23 hm5C_associated_SNPs_70774 0 0 1 RPS3 POSTAR2 ENCODE chr2:44079506-44079586
64251 chr1 9670637 9670637 1 + G A rs182793432 9670634 + 9670614 9670654 41 CCAGCGCCTTCCGTGGCCGGCTCGGTGGCCTCCAGCTCCGG CCAGCGCCTTCCGTGGCCGGCTCAGTGGCCTCCAGCTCCGG < 41bp 0.743988808577975 0.506856555629599 0.42323807 0.3920681 prediction 0.474264505896751 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9670634 chr1:9670637 synonymous SNV . 0 24 hm5C_associated_SNPs_70777 0 0 2 IGF2BP2 POSTAR2 ENCODE chr1:9670571-9670648
64251 chr1 95709918 95709918 1 + G T UCEC 95709916 + 95709896 95709936 41 CTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAG CTGAACAGTTGACCAGGGCCCATTGTGTGACTGTGAAAGAG < 41bp 0.737120358075561 0.413114924410735 0.12090886 0.039943397 prediction 0.474240716151122 Functional Loss - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95709916 chr1:95709918 nonsynonymous SNV 0.926 4 23 hm5C_associated_SNPs_70783 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:95709872-95709928
64251 chr10 64913808 64913808 1 + C T LUAD 64913806 + 64913786 64913826 41 GTCAGAGTTATGGAGCTTGCCACCACATGCAGAAACTGCTA GTCAGAGTTATGGAGCTTGCCATCACATGCAGAAACTGCTA < 41bp 0.839814739225183 0.602695420731236 0.09985587 0.065250516 prediction 0.474238636987895 Functional Loss - NRBF2 ENSG00000148572 CDS Human protein_coding chr10:64913806 chr10:64913808 nonsynonymous SNV 0.899 0 23 hm5C_associated_SNPs_70784 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:64913796-64913817
64251 chr9 127088704 127088704 1 + G A SARC 127088701 + 127088681 127088721 41 GTGGAGCACATGCATTCACGCCGGGTGATGCACCGAGGTAC GTGGAGCACATGCATTCACGCCGAGTGATGCACCGAGGTAC < 41bp 0.776886515651956 0.539768903574935 0.8743137 0.47000134 prediction 0.474235224154042 Functional Loss - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127088701 chr9:127088704 synonymous SNV . 0 24 hm5C_associated_SNPs_70786 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:127088697-127088717
64251 chr19 10789837 10789837 1 + G A COAD 10789834 + 10789814 10789854 41 GGTCTTGAGGGACCTGTGCACTCGCGTGCCCACCTGGGGTC GGTCTTGAGGGACCTGTGCACTCACGTGCCCACCTGGGGTC < 41bp 0.764963098350783 0.527848254556862 0.85166395 0.6051388 prediction 0.474229687587842 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10789834 chr19:10789837 nonsynonymous SNV 0.804 4 24 hm5C_associated_SNPs_70789 0 0 22 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10789768-10789838
64251 chr19 41928947 41928947 1 + C T COAD 41928945 + 41928925 41928965 41 GACGACAGTTCAGCGTACCGCTCGGTGGATGAGGTCAATTA GACGACAGTTCAGCGTACCGCTTGGTGGATGAGGTCAATTA < 41bp 0.831755797480024 0.594647542127991 0.19519347 0.17827949 prediction 0.474216510704067 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41928945 chr19:41928947 nonsynonymous SNV 0.666 5 23 hm5C_associated_SNPs_70793 0 0 1 FMR1 POSTAR2 ENCODE chr19:41928933-41929043
64251 chr1 107599942 107599942 1 + A C UCEC 107599938 + 107599918 107599958 41 CCCCCATCAGCGACCAGATGCTGGAATGGCGCCTGGGCTTC CCCCCATCAGCGACCAGATGCTGGCATGGCGCCTGGGCTTC < 41bp 0.922120315510499 0.685015108183394 0.9017565 0.78246605 prediction 0.47421041465421 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599938 chr1:107599942 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_70795 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr1:107599941-107599942
64251 chr11 118869166 118869166 1 + C T KIRP 118869164 + 118869144 118869184 41 AGGCGGCCCGCAAGGCCATCCGCGCCGCTCAGGTGGAGCGC AGGCGGCCCGCAAGGCCATCCGTGCCGCTCAGGTGGAGCGC < 41bp 0.788792403836358 0.551696791552588 0.43520766 0.3843713 prediction 0.47419122456754 Functional Loss - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118869164 chr11:118869166 synonymous SNV . 0 23 hm5C_associated_SNPs_70799 0 0 2 PPIG POSTAR2 ENCODE chr11:118869138-118869167
64251 chr16 48396001 48396001 1 - T G UCEC 48396005 - 48395985 48396025 41 TGAAATAACTCTGCCACACACAGAAAAAGCAGACCATGAAG TGAAATAACTCTGCCACACACAGACAAAGCAGACCATGAAG < 41bp 0.737094486312646 0.325836915324514 0.4216409 0.040859193 prediction 0.474188972625291 Functional Loss - SIAH1 ENSG00000196470 CDS Human protein_coding chr16:48396005 chr16:48396001 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_70800 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:48395964-48396001
64251 chr1 236341849 236341849 1 + G A COAD 236341846 + 236341826 236341866 41 GTGCGAGTGGCCATTAATGACACGCTCTTCGTGCTGTGTGC GTGCGAGTGGCCATTAATGACACACTCTTCGTGCTGTGTGC < 41bp 0.737088991530171 0.496974785174255 0.041799784 0.02028042 prediction 0.474177983060343 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236341846 chr1:236341849 synonymous SNV . 0 24 hm5C_associated_SNPs_70802 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:236341840-236341860
64251 chr1 116916064 116916064 1 + A C rs546221648 116916060 + 116916040 116916080 41 CCTGGTCCCGCTCGCTCGGCCGGGAGCTGCTCTGTGCTTTT CCTGGTCCCGCTCGCTCGGCCGGGCGCTGCTCTGTGCTTTT < 41bp 0.910522728274267 0.673436042720495 0.88068616 0.5002389 prediction 0.474173371107543 Functional Loss - ATP1A1 ENSG00000269279 CDS Human other chr1:116916060 chr1:116916064 synonymous SNV . 0 25 hm5C_associated_SNPs_70806 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:116915900-116916120
64251 chr19 34706141 34706141 1 + T C LUAD 34706140 + 34706120 34706160 41 AGCTGTTGGGAGAAGGAGTCCTGTATCAACCAGGCCTTTGC AGCTGTTGGGAGAAGGAGTCCCGTATCAACCAGGCCTTTGC < 41bp 0.793339342374648 0.55625899161212 0.36387807 0.40136296 prediction 0.474160701525056 Functional Loss - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34706140 chr19:34706141 synonymous SNV . 0 22 hm5C_associated_SNPs_70809 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34706118-34706152
64251 chr1 109779109 109779109 1 + C T LUAD 109779107 + 109779087 109779127 41 TTGGTCTCCTGTTCTAATTGCACGGATTACCAGGCTCGCCG TTGGTCTCCTGTTCTAATTGCATGGATTACCAGGCTCGCCG < 41bp 0.75262753961816 0.515558064319578 0.3340968 0.40312827 prediction 0.474138950597163 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109779107 chr1:109779109 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_70816 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:109779047-109779123
64251 chr3 10858144 10858144 1 + G A GBM 10858141 + 10858121 10858161 41 GGAGTTCGTGCTGAGCGTGGCCGGGGAGATCATTGGGCTGG GGAGTTCGTGCTGAGCGTGGCCGAGGAGATCATTGGGCTGG < 41bp 0.762266613211571 0.52520410801333 0.9024768 0.57790715 prediction 0.474125010396482 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10858141 chr3:10858144 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_70820 0 0 1 RPS3 POSTAR2 ENCODE chr3:10858121-10858196
64251 chr5 33455163 33455163 1 + C T HNSC 33455161 + 33455141 33455181 41 GATTCTATTATGACATGTACCTCGAAGAAGGGTAAGCCATC GATTCTATTATGACATGTACCTTGAAGAAGGGTAAGCCATC < 41bp 0.737057490686986 0.444104033553178 0.20331872 0.017024815 prediction 0.474114981373972 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33455161 chr5:33455163 synonymous SNV . 0 23 hm5C_associated_SNPs_70823 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33455077-33455165
64251 chr14 95034559 95034559 1 + G A UCEC 95034556 + 95034536 95034576 41 ATTTTGCCCAGGCTGGGCTTCACGGATCTGTTCTCCAAGTG ATTTTGCCCAGGCTGGGCTTCACAGATCTGTTCTCCAAGTG < 41bp 0.737056832108053 0.490282957545429 0.19476849 0.13593212 prediction 0.474113664216106 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95034556 chr14:95034559 synonymous SNV . 0 24 hm5C_associated_SNPs_70825 0 0 2 RPS3 POSTAR2 ENCODE chr14:95034525-95034592
64251 chr1 43827899 43827899 1 + G C CESC 43827895 + 43827875 43827915 41 ATCCTCTGGTCTCCCCATTACAAGGAGCTCATCTCAGGCCA ATCCTCTGGTCTCCCCATTACAAGCAGCTCATCTCAGGCCA < 41bp 0.841865497885177 0.604812216687539 0.600562 0.1597347 prediction 0.474106562395278 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43827895 chr1:43827899 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_70827 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:43827868-43827906
64251 chr3 183911471 183911471 1 + C T UCEC 183911469 + 183911449 183911489 41 TCCTCCAGGAACAGTTCCGCCGCGAAGGCTTCCTCTAGGGC TCCTCCAGGAACAGTTCCGCCGTGAAGGCTTCCTCTAGGGC < 41bp 0.814420504081464 0.577368006492085 0.6525794 0.3609357 prediction 0.474104995178756 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183911469 chr3:183911471 synonymous SNV . 0 23 hm5C_associated_SNPs_70828 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:183911460-183911480
64251 chr1 156595020 156595020 1 + G T COAD 156595018 + 156594998 156595038 41 GGAAGTTTTCGGGGCTAGACCAGTGCGACGGCGGCTGGCTG GGAAGTTTTCGGGGCTAGACCATTGCGACGGCGGCTGGCTG < 41bp 0.737050154182631 0.392284149756326 0.9016074 0.62901175 prediction 0.474100308365263 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156595018 chr1:156595020 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_70831 0 0 1 RBM15 POSTAR2 ENCODE chr1:156595006-156595056
64251 chr19 7532188 7532188 1 + G A UCEC 7532185 + 7532165 7532205 41 GCAGTTCCGGCTGCAGTCGACGCGTGGGAACCTGCTGCTGG GCAGTTCCGGCTGCAGTCGACGCATGGGAACCTGCTGCTGG < 41bp 0.737049646062632 0.495916023168903 0.84001184 0.77030075 prediction 0.474099292125263 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7532185 chr19:7532188 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_70832 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:7532183-7532204
64251 chr6 148865648 148865648 1 + C T UCEC 148865646 + 148865626 148865666 41 CCAGTGGGGCCCTCCCCAGTCCCGATGCGCCATGCCTGCCA CCAGTGGGGCCCTCCCCAGTCCTGATGCGCCATGCCTGCCA < 41bp 0.801796582354696 0.564753689574938 0.18783912 0.18944308 prediction 0.474085785559516 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865646 chr6:148865648 synonymous SNV . 0 23 hm5C_associated_SNPs_70834 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr6:148865644-148865664
64251 chr19 30935282 30935282 1 + G C LUSC 30935281 + 30935261 30935301 41 GGAGGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTGTACCT GGAGGACGCGGTGGCCCCGGCCGCGGGCTTCCGCTGTACCT < 41bp 0.880171174693223 0.643131514129777 0.88617945 0.40594855 prediction 0.474079321126891 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935281 chr19:30935282 synonymous SNV . 0 22 hm5C_associated_SNPs_70836 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30935280-30935300
64251 chr15 42129021 42129021 1 + C T rs371510124 42129019 + 42128999 42129039 41 CCCCTTGGCGCCAGACCTAGCACGGTACCCTAGTTACAGTC CCCCTTGGCGCCAGACCTAGCATGGTACCCTAGTTACAGTC < 41bp 0.737036400603413 0.483645989140107 0.81196743 0.77056986 prediction 0.474072801206826 Functional Loss - JMJD7 ENSG00000168970;ENSG00000243789 CDS Human other chr15:42129019 chr15:42129021 nonsynonymous SNV 0.412 2 23 hm5C_associated_SNPs_70839 0 0 1 DDX24 POSTAR2 ENCODE chr15:42128998-42129059
64251 chr15 42129022 42129022 1 + G A UCEC 42129019 + 42128999 42129039 41 CCCCTTGGCGCCAGACCTAGCACGGTACCCTAGTTACAGTC CCCCTTGGCGCCAGACCTAGCACAGTACCCTAGTTACAGTC < 41bp 0.737036400603413 0.498909414933366 0.81196743 0.32727104 prediction 0.474072801206826 Functional Loss - JMJD7 ENSG00000168970;ENSG00000243789 CDS Human other chr15:42129019 chr15:42129022 nonsynonymous SNV 0.398 0 24 hm5C_associated_SNPs_70840 0 0 1 DDX24 POSTAR2 ENCODE chr15:42128998-42129059
64251 chr2 176988697 176988697 1 + A C LAML 176988693 + 176988673 176988713 41 GCGAACTGGATCCACGCTCGCTCCACCCGGAAAAAGCGCTG GCGAACTGGATCCACGCTCGCTCCCCCCGGAAAAAGCGCTG < 41bp 0.737034342154328 0.31286376701357 0.39794824 0.06932378 prediction 0.474068684308655 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988693 chr2:176988697 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_70841 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176988662-176988703
64251 chr8 22475212 22475212 1 + G A STAD 22475209 + 22475189 22475229 41 TTATCTTGGCCTTTCTGTAGCAGGAGCAAAGCTGGAGGATT TTATCTTGGCCTTTCTGTAGCAGAAGCAAAGCTGGAGGATT < 41bp 0.758179133793689 0.52114614905453 0.9302426 0.77234316 prediction 0.474065969478318 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22475209 chr8:22475212 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_70843 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22475211-22475234
64251 chr11 68377432 68377432 1 + C T BLCA 68377430 + 68377410 68377450 41 GTAAAGACGCAGAGGAGTGTCCCGAGACTGCAGAGGCGAAG GTAAAGACGCAGAGGAGTGTCCTGAGACTGCAGAGGCGAAG < 41bp 0.823328225625275 0.586297360581459 0.16759014 0.22989973 prediction 0.474061730087632 Functional Loss - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68377430 chr11:68377432 synonymous SNV . 0 23 hm5C_associated_SNPs_70846 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:68377401-68377461
64251 chr1 26769302 26769302 1 + G T UCEC 26769299 + 26769279 26769319 41 ATTGAGAACTTCAAACGCTCCAAGAGTGAGGTAGACGGGCT ATTGAGAACTTCAAACGCTCCAATAGTGAGGTAGACGGGCT < 41bp 0.810797928441543 0.573771303979504 0.11781058 0.10068017 prediction 0.474053248924078 Functional Loss - DHDDS ENSG00000117682 CDS Human protein_coding chr1:26769299 chr1:26769302 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_70849 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:26769275-26769319
64251 chr12 57960994 57960994 1 + C T GBM 57960992 + 57960972 57961012 41 TCAAATCGTCATGTGGCTGTCACCAGTGAGTGAGGATACAA TCAAATCGTCATGTGGCTGTCATCAGTGAGTGAGGATACAA < 41bp 0.737024075355933 0.452277934379611 0.3337683 0.22142538 prediction 0.474048150711866 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57960992 chr12:57960994 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_70851 0 0 1 DDX24 POSTAR2 ENCODE chr12:57960953-57960995
64251 chr4 56768534 56768534 1 + C T UCEC 56768532 + 56768512 56768552 41 TTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAA TTTCTTTGAAGGTGTTGAAGCTTGCGTGGCACAGGGCATAA < 41bp 0.73702406893468 0.449000770559193 0.10190037 0.058504164 prediction 0.474048137869361 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56768532 chr4:56768534 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_70852 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr4:56768524-56768545
64251 chr12 6623472 6623472 1 + C T SKCM 6623470 + 6623450 6623490 41 TACCGCCTTCTGGAGAATCCCACCATTAATCACCAGAAGAA TACCGCCTTCTGGAGAATCCCATCATTAATCACCAGAAGAA < 41bp 0.737023465088257 0.435008684240592 0.5458211 0.14714754 prediction 0.474046930176513 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6623470 chr12:6623472 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_70853 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr12:6623446-6623472
64251 chr2 10263519 10263519 1 + T C LGG 10263518 + 10263498 10263538 41 TTTTCTCCCCCAACAGAAAACTAAAGCAGCTGCCCCCGGCG TTTTCTCCCCCAACAGAAAACCAAAGCAGCTGCCCCCGGCG < 41bp 0.749386208065448 0.512365118817768 0.48030332 0.35795844 prediction 0.474042178495359 Functional Loss - RRM2 ENSG00000171848 CDS Human protein_coding chr2:10263518 chr2:10263519 synonymous SNV . 0 22 hm5C_associated_SNPs_70855 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:10263518-10263519
64251 chr2 210570356 210570356 1 + C T STAD 210570354 + 210570334 210570374 41 TCTTCTCTCCCAAGACCTTCCTCCATTCTCCCTCCTCGGCG TCTTCTCTCCCAAGACCTTCCTTCATTCTCCCTCCTCGGCG < 41bp 0.737019263607744 0.434491729935781 0.94335866 0.12272346 prediction 0.474038527215488 Functional Loss - MAP2 ENSG00000078018 CDS Human protein_coding chr2:210570354 chr2:210570356 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_70857 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:210570340-210570360
64251 chr10 70661161 70661161 1 + G T LIHC 70661158 + 70661138 70661178 41 GTAATGCCTGGGAAACTCCTCTGGGGGGACATTATGGAGCT GTAATGCCTGGGAAACTCCTCTGTGGGGACATTATGGAGCT < 41bp 0.913794394452269 0.676777840257272 0.57413745 0.13259894 prediction 0.474033108389995 Functional Loss - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70661158 chr10:70661161 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_70859 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70661138-70661166
64251 chr11 73372619 73372619 1 + C T BLCA 73372617 + 73372597 73372637 41 GCCACTGGGGCGGCGCTGGGCTCGCTCATGTGGTCGCCCTG GCCACTGGGGCGGCGCTGGGCTTGCTCATGTGGTCGCCCTG < 41bp 0.796087094976008 0.559079696834393 0.29171497 0.37403476 prediction 0.47401479628323 Functional Loss - PLEKHB1 ENSG00000021300 CDS Human protein_coding chr11:73372617 chr11:73372619 nonsynonymous SNV 0.550 4 23 hm5C_associated_SNPs_70862 0 0 2 LARP4 POSTAR2 ENCODE chr11:73372611-73372725
64251 chr9 128509808 128509808 1 + G C UCEC 128509804 + 128509784 128509824 41 GGCCACTCGGTGCAGGGGGGCATGGCCCTGCCGCCTCCCCC GGCCACTCGGTGCAGGGGGGCATGCCCCTGCCGCCTCCCCC < 41bp 0.73699994136299 0.462568124409119 0.8382734 0.57209 prediction 0.47399988272598 Functional Loss - PBX3 ENSG00000167081 CDS Human protein_coding chr9:128509804 chr9:128509808 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_70869 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr9:128509803-128509831
64251 chr19 7964965 7964965 1 + C T HNSC 7964963 + 7964943 7964983 41 GCACCTGGAGGGGCTTTTCCCCCAGGAGCTAGCTCGGGCAG GCACCTGGAGGGGCTTTTCCCCTAGGAGCTAGCTCGGGCAG < 41bp 0.742191961408528 0.505194805175915 0.31140602 0.43473697 prediction 0.473994312465225 Functional Loss - LRRC8E ENSG00000171017;ENSG00000214248 CDS Human other chr19:7964963 chr19:7964965 stopgain 0.855 0 23 hm5C_associated_SNPs_70872 0 0 1 RBM15 POSTAR2 ENCODE chr19:7964956-7965004
64251 chr16 67179309 67179309 1 + C T UCEC 67179307 + 67179287 67179327 41 GATGGTCAGACAGAAACATGCACGACCTACAGCAAGGTGAG GATGGTCAGACAGAAACATGCATGACCTACAGCAAGGTGAG < 41bp 0.736996699616216 0.456182455728171 0.31617254 0.2670762 prediction 0.473993399232432 Functional Loss - C16orf70 ENSG00000125149 CDS Human protein_coding chr16:67179307 chr16:67179309 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_70874 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:67179267-67179345
64251 chr7 5633104 5633104 1 + C T SKCM 5633102 + 5633082 5633122 41 GCGTCGACTCGCTCATCACCCTCGCCTTCCAGGACCAGCGC GCGTCGACTCGCTCATCACCCTTGCCTTCCAGGACCAGCGC < 41bp 0.736991877523357 0.492127550638988 0.06043732 0.02587244 prediction 0.473983755046715 Functional Loss - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5633102 chr7:5633104 synonymous SNV . 0 23 hm5C_associated_SNPs_70875 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:5633053-5633105
64251 chr7 116339281 116339281 1 + C T UCEC 116339279 + 116339259 116339299 41 TATCAGCTTCCCAACTTCACCGCGGAAACACCCATCCAGAA TATCAGCTTCCCAACTTCACCGTGGAAACACCCATCCAGAA < 41bp 0.757570446599393 0.520592815813817 0.05548477 0.03228402 prediction 0.47395526157115 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116339279 chr7:116339281 nonsynonymous SNV 0.875 3 23 hm5C_associated_SNPs_70877 0 0 1 DDX3X POSTAR2 ENCODE chr7:116339270-116339295
64251 chr11 993307 993307 1 + C T STAD 993305 + 993285 993325 41 CTCTTCAGGCTCCCGCGTGCCACGAGAACCTGGTCAAAGTG CTCTTCAGGCTCCCGCGTGCCATGAGAACCTGGTCAAAGTG < 41bp 0.84721107921203 0.610236480907913 0.24585223 0.22127128 prediction 0.473949196608235 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:993305 chr11:993307 synonymous SNV . 0 23 hm5C_associated_SNPs_70879 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:993300-993320
64251 chr16 3712902 3712902 1 + G A rs565099748 3712899 + 3712879 3712919 41 TCACCTTCACGTTGGTGACACGCGACCCCAGCACATTTCTC TCACCTTCACGTTGGTGACACGCAACCCCAGCACATTTCTC < 41bp 0.736968767608781 0.493821833387652 0.46601638 0.26440114 prediction 0.473937535217562 Functional Loss - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712899 chr16:3712902 nonsynonymous SNV 0.611 0 24 hm5C_associated_SNPs_70882 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:3712902-3712952
64251 chr9 35853543 35853543 1 + G A UCEC 35853540 + 35853520 35853560 41 CGCCGGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTT CGCCGGCACTGCTACCCACCCACATGGCGCCGCTGGCTTTT < 41bp 0.763978978528386 0.527020913790212 0.2207101 0.1288499 prediction 0.473916129476347 Functional Loss - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35853540 chr9:35853543 synonymous SNV . 0 24 hm5C_associated_SNPs_70888 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35853543-35853582
64251 chr4 146479012 146479012 1 + G T LUAD 146479009 + 146478989 146479029 41 GCTGGATTGAGATACATCTGCACGGCCCCCTCCAGTGGCTG GCTGGATTGAGATACATCTGCACTGCCCCCTCCAGTGGCTG < 41bp 0.736941108543673 0.349032960748266 0.15489438 0.11606082 prediction 0.473882217087346 Functional Loss - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146479009 chr4:146479012 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_70891 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:146478999-146479028
64251 chr8 17409495 17409495 1 + G A COAD 17409492 + 17409472 17409512 41 TTCTCTCTGCGCCTTGTCAACAAGGTACATTGCATCGCCTT TTCTCTCTGCGCCTTGTCAACAAAGTACATTGCATCGCCTT < 41bp 0.749475092342235 0.512534103502863 0.85859805 0.27099663 prediction 0.473881977678744 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17409492 chr8:17409495 nonsynonymous SNV 0.973 5 24 hm5C_associated_SNPs_70892 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:17409471-17409495
64251 chr2 173369391 173369391 1 + C T rs114005087 173369389 + 173369369 173369409 41 CCTGCTGCGCAGACGTCCATCACGTTAGCTGTCCCACATCA CCTGCTGCGCAGACGTCCATCATGTTAGCTGTCCCACATCA < 41bp 0.746255240125259 0.509315532779059 0.42370307 0.42669046 prediction 0.473879414692399 Functional Loss - ITGA6 ENSG00000225205 ncRNA_intronic Human antisense chr2:173369389 chr2:173369391 . . 0 23 hm5C_associated_SNPs_70893 1 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr2:173369380-173369440
64251 chr4 6863244 6863244 1 + G T LUSC 6863242 + 6863222 6863262 41 AGAAATAGGGAGAAAAGATCCTGGGAGCACTGAAGGAAAAG AGAAATAGGGAGAAAAGATCCTTGGAGCACTGAAGGAAAAG < 41bp 0.736938628040959 0.403224260001693 0.14382169 0.021315426 prediction 0.473877256081919 Functional Loss - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6863242 chr4:6863244 nonsynonymous SNV 0.037 3 23 hm5C_associated_SNPs_70894 0 0 1 RBM15 POSTAR2 ENCODE chr4:6863239-6863276
64251 chr22 20761250 20761250 1 + C T UCEC 20761248 + 20761228 20761268 41 TTTCTCCCTGGGGAGCAAACCTCGAAACTAACATGATGTGC TTTCTCCCTGGGGAGCAAACCTTGAAACTAACATGATGTGC < 41bp 0.796326043968244 0.559396730039464 0.9106194 0.2824728 prediction 0.473858627857559 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20761248 chr22:20761250 stopgain 0.050 0 23 hm5C_associated_SNPs_70899 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr22:20761240-20761260
64251 chr7 6049088 6049088 1 + G T BLCA 6049085 + 6049065 6049105 41 TGTACCGGCTCCCCAACGTGCACGGCAGGAGCTACGGCCCA TGTACCGGCTCCCCAACGTGCACTGCAGGAGCTACGGCCCA < 41bp 0.916846939120091 0.679918359973041 0.42922845 0.17160434 prediction 0.473857158294101 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6049085 chr7:6049088 nonsynonymous SNV 0.161 0 24 hm5C_associated_SNPs_70901 0 0 1 PRPF8 POSTAR2 ENCODE chr7:6049088-6049174
64251 chr12 6956028 6956028 1 + G T THYM 6956025 + 6956005 6956045 41 TGACGGGATGGCTGTGGCCACAGGTTCCTGGGACAGCTTCC TGACGGGATGGCTGTGGCCACAGTTTCCTGGGACAGCTTCC < 41bp 0.736912801699724 0.340248099663059 0.9059586 0.36442322 prediction 0.473825603399447 Functional Loss - CDCA3;GNB3 ENSG00000111664;ENSG00000111665 CDS Human other chr12:6956025 chr12:6956028 nonsynonymous SNV 0.963 4 24 hm5C_associated_SNPs_70910 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr12:6955996-6956034
64251 chr6 7585967 7585967 1 + G C rs2744380 7585963 + 7585943 7585983 41 TTACAACATGTCTTCGGCTCCGGGGTCCCGCTCCGGCTCCC TTACAACATGTCTTCGGCTCCGGGCTCCCGCTCCGGCTCCC < 41bp 0.807958294132975 0.571046161022306 0.9136253 0.84849447 prediction 0.473824266221338 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7585963 chr6:7585967 synonymous SNV . 0 25 hm5C_associated_SNPs_70911 7 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:7585967-7585968
64251 chr10 127530320 127530320 1 + A C LUAD 127530319 + 127530299 127530339 41 TCATTAAGGATACCTGTTACCATGGCTGCGATTGTTAGCAC TCATTAAGGATACCTGTTACCCTGGCTGCGATTGTTAGCAC < 41bp 0.79048864066489 0.553579965034716 0.6191825 0.12336865 prediction 0.473817351260348 Functional Loss - DHX32 ENSG00000089876 CDS Human protein_coding chr10:127530319 chr10:127530320 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_70914 0 0 17 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr10:127530200-127530328
64251 chr11 71238615 71238615 1 + G A BLCA 71238612 + 71238592 71238632 41 TTCTAAGGGGGGCTGTGGTTCTTGTGGCTGCTCCCAGTGCA TTCTAAGGGGGGCTGTGGTTCTTATGGCTGCTCCCAGTGCA < 41bp 0.74672303055317 0.509821165097948 0.83877254 0.52648586 prediction 0.473803730910444 Functional Loss - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238612 chr11:71238615 nonsynonymous SNV 0.041 1 24 hm5C_associated_SNPs_70916 0 0 2 DDX6 POSTAR2 ENCODE chr11:71238583-71238632
64251 chr16 83941852 83941852 1 + G A COAD 83941849 + 83941829 83941869 41 GGGAGCCCCTGGTCGTTTTGCACGTGGCACTGACTGGTGAC GGGAGCCCCTGGTCGTTTTGCACATGGCACTGACTGGTGAC < 41bp 0.764213690855629 0.527313945921976 0.46579757 0.32661244 prediction 0.473799489867306 Functional Loss - MLYCD ENSG00000103150;ENSG00000260300 CDS Human other chr16:83941849 chr16:83941852 nonsynonymous SNV 0.191 5 24 hm5C_associated_SNPs_70917 0 0 1 PPIG POSTAR2 ENCODE chr16:83941809-83941897
64251 chr6 131962640 131962640 1 + G T CESC 131962637 + 131962617 131962657 41 TCATGTCACTTGGATTAGGCCTGGGGCTTGGACTCAGGAAA TCATGTCACTTGGATTAGGCCTGTGGCTTGGACTCAGGAAA < 41bp 0.73689807037629 0.345461672810033 0.41107056 0.24582478 prediction 0.47379614075258 Functional Loss - ENPP3 ENSG00000154269 CDS Human protein_coding chr6:131962637 chr6:131962640 nonsynonymous SNV 0.854 2 24 hm5C_associated_SNPs_70918 0 0 4 DDX24 POSTAR2 ENCODE chr6:131962634-131962658
64251 chr12 98993742 98993742 1 + G A LUSC 98993739 + 98993719 98993759 41 TCTTGATTTCCTAGATTCTACAAGGGGGTTGCTCCTCTCTG TCTTGATTTCCTAGATTCTACAAAGGGGTTGCTCCTCTCTG < 41bp 0.737492276014459 0.500595139829097 0.5385491 0.25071585 prediction 0.473794272370724 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98993739 chr12:98993742 synonymous SNV . 0 24 hm5C_associated_SNPs_70920 0 0 23 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:98993707-98993760
64251 chr5 1816018 1816018 1 + G T UCEC 1816016 + 1815996 1816036 41 ACTGTGGGCTCCAGTTCAGACAGCACCACCACTAGAGCGTG ACTGTGGGCTCCAGTTCAGACATCACCACCACTAGAGCGTG < 41bp 0.887816707981427 0.650925467589965 0.13413137 0.04304412 prediction 0.473782480782926 Functional Loss - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1816016 chr5:1816018 nonsynonymous SNV 0.281 1 23 hm5C_associated_SNPs_70924 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:1815971-1816030
64251 chr14 76964573 76964573 1 + G A LUSC 76964570 + 76964550 76964590 41 CCTGCAGATTCCATGTACATCGAGGATCTAGAGGCTGTCCA CCTGCAGATTCCATGTACATCGAAGATCTAGAGGCTGTCCA < 41bp 0.736883201963944 0.499551249422734 0.38296768 0.13036123 prediction 0.473766403927889 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76964570 chr14:76964573 synonymous SNV . 0 24 hm5C_associated_SNPs_70929 0 0 1 ZNF622 POSTAR2 ENCODE chr14:76964572-76964715
64251 chr4 951856 951856 1 + T C UCEC 951855 + 951835 951875 41 CCACTAGCCTACCAGCAGACCTCGGCCTTCGCCCGGCAGCC CCACTAGCCTACCAGCAGACCCCGGCCTTCGCCCGGCAGCC < 41bp 0.736871606276307 0.499564034362773 0.30291116 0.28464672 prediction 0.473743212552615 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951855 chr4:951856 nonsynonymous SNV 0.872 1 22 hm5C_associated_SNPs_70934 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:951841-951869
64251 chr17 4923933 4923933 1 + G A SKCM 4923930 + 4923910 4923950 41 ACTTTGCCCAGAAGGAACTGCTGGAGCAGCAAGGCATCGAC ACTTTGCCCAGAAGGAACTGCTGAAGCAGCAAGGCATCGAC < 41bp 0.743951331342311 0.5071028198054 0.2831594 0.15701854 prediction 0.473697023073823 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4923930 chr17:4923933 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_70945 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:4923896-4923933
64251 chr17 4618317 4618317 1 + G A UCEC 4618314 + 4618294 4618334 41 TTCTGTTTTGTTAGGGTCTTCAAGAAGTCGAGCCCTAACTG TTCTGTTTTGTTAGGGTCTTCAAAAAGTCGAGCCCTAACTG < 41bp 0.737511871641151 0.500681229611647 0.8583205 0.3327657 prediction 0.473661284059008 Functional Loss - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4618314 chr17:4618317 synonymous SNV . 0 24 hm5C_associated_SNPs_70946 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:4618312-4618344
64251 chr19 18778578 18778578 1 + C T UCEC 18778576 + 18778556 18778596 41 ATCATCGACTTCGCCTACAGCGCCGAGGTGACACTGGACCT ATCATCGACTTCGCCTACAGCGTCGAGGTGACACTGGACCT < 41bp 0.761313032276951 0.524483395857582 0.14142448 0.22666565 prediction 0.473659272838739 Functional Loss - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18778576 chr19:18778578 nonsynonymous SNV 0.183 2 23 hm5C_associated_SNPs_70947 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:18778568-18778591
64251 chr2 109292356 109292356 1 + C T UCEC 109292354 + 109292334 109292374 41 GAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAGC GAAGGAGCTGACTGCCGATGCATGGGAGCTGAAAGGGGAGC < 41bp 0.736824443635293 0.463711521265484 0.39255637 0.4057509 prediction 0.473648887270586 Functional Loss - LIMS1 ENSG00000169756 CDS Human protein_coding chr2:109292354 chr2:109292356 nonsynonymous SNV 0.980 5 23 hm5C_associated_SNPs_70948 0 0 3 METAP2 POSTAR2 ENCODE chr2:109292332-109292373
64251 chr2 109292357 109292357 1 + G T UCEC 109292354 + 109292334 109292374 41 GAAGGAGCTGACTGCCGATGCACGGGAGCTGAAAGGGGAGC GAAGGAGCTGACTGCCGATGCACTGGAGCTGAAAGGGGAGC < 41bp 0.736824443635293 0.344921588619118 0.39255637 0.376465 prediction 0.473648887270586 Functional Loss - LIMS1 ENSG00000169756 CDS Human protein_coding chr2:109292354 chr2:109292357 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_70949 0 0 3 METAP2 POSTAR2 ENCODE chr2:109292332-109292373
64251 chr1 150131409 150131409 1 + G A LUAD 150131406 + 150131386 150131426 41 CCCAACCCGGGGCAGCTGTCCCGGATCCAGGACCTGGTAGC CCCAACCCGGGGCAGCTGTCCCGAATCCAGGACCTGGTAGC < 41bp 0.749893316669782 0.513070202696297 0.877766 0.34692293 prediction 0.473646227946969 Functional Loss - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131406 chr1:150131409 synonymous SNV . 0 24 hm5C_associated_SNPs_70950 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131400-150131422
64251 chr17 71232575 71232575 1 + T C UCEC 71232574 + 71232554 71232594 41 AAATGCAGAGAAAAGTATGTCTGCAACAGAAAAGCAGGAAC AAATGCAGAGAAAAGTATGTCCGCAACAGAAAAGCAGGAAC < 41bp 0.764197405505325 0.527381295850535 0.32915735 0.21191636 prediction 0.47363221930958 Functional Loss - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232574 chr17:71232575 synonymous SNV . 0 22 hm5C_associated_SNPs_70954 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232572-71232607
64251 chr19 14574937 14574937 1 + G A rs114585039 14574934 + 14574914 14574954 41 CAGCTCACCTCAGAAGAGCTCGCGGGATCCTCCTTCCAGCC CAGCTCACCTCAGAAGAGCTCGCAGGATCCTCCTTCCAGCC < 41bp 0.783313906324491 0.546503418161862 0.6391419 0.28267634 prediction 0.47362097632526 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574934 chr19:14574937 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_70955 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14574929-14574952
64251 chr8 104342280 104342280 1 + C T BRCA 104342278 + 104342258 104342298 41 AGGCAGTGTATCTGAAAGTGCGCGGAGTGAAGGAAGGTGAG AGGCAGTGTATCTGAAAGTGCGTGGAGTGAAGGAAGGTGAG < 41bp 0.736808735049352 0.47884333999176 0.2702968 0.24703747 prediction 0.473617470098703 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342278 chr8:104342280 nonsynonymous SNV 0.031 2 23 hm5C_associated_SNPs_70957 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:104342241-104342286
64251 chr19 16989037 16989037 1 + C T UCEC 16989035 + 16989015 16989055 41 CCGGTGGCAGAGCGAGCAGGCGCGGGCCCTGCGCGGTGAGG CCGGTGGCAGAGCGAGCAGGCGTGGGCCCTGCGCGGTGAGG < 41bp 0.772426996323837 0.535618272895535 0.8901274 0.8652468 prediction 0.473617446856605 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16989035 chr19:16989037 nonsynonymous SNV 0.403 4 23 hm5C_associated_SNPs_70958 0 0 4 BUD13 POSTAR2 ENCODE chr19:16989031-16989066
64251 chr9 36671152 36671152 1 + A C UCEC 36671151 + 36671131 36671171 41 GGTTCTGCCAGAGACGGGCCCAGAAGACTAAAGGTAAGCAG GGTTCTGCCAGAGACGGGCCCCGAAGACTAAAGGTAAGCAG < 41bp 0.775948457826494 0.539142612688321 0.26215523 0.2238844 prediction 0.473611690276346 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36671151 chr9:36671152 synonymous SNV . 0 22 hm5C_associated_SNPs_70960 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36671124-36671163
64251 chr1 22895811 22895811 1 + G A UCEC 22895808 + 22895788 22895828 41 TGCTGGACACGTCGACCATCCACGGGGACTGGGGCTGGCTC TGCTGGACACGTCGACCATCCACAGGGACTGGGGCTGGCTC < 41bp 0.775709428670383 0.538912547351888 0.5952621 0.09983349 prediction 0.473593762636989 Functional Loss - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22895808 chr1:22895811 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_70966 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:22895800-22895820
64251 chrX 16836904 16836904 1 + G T UCEC 16836901 + 16836881 16836921 41 TGAGCCCAGCATACTGCACGCAAGAATCAAGAGAGGAAATC TGAGCCCAGCATACTGCACGCAATAATCAAGAGAGGAAATC < 41bp 0.736794562229412 0.35332399579724 0.12894434 0.07074693 prediction 0.473589124458825 Functional Loss - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16836901 chrX:16836904 stopgain 0.407 1 24 hm5C_associated_SNPs_70968 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:16836858-16836908
64251 chr2 233244934 233244934 1 + G A rs149065046 233244931 + 233244911 233244951 41 GGCCGAAAGTACATGTTTCGCATGGGAACCCCAGACCCTGA GGCCGAAAGTACATGTTTCGCATAGGAACCCCAGACCCTGA < 41bp 0.749824214953458 0.513029734536134 0.36087862 0.10466793 prediction 0.473588960834647 Functional Loss - ALPP ENSG00000163283 CDS Human protein_coding chr2:233244931 chr2:233244934 nonsynonymous SNV 0.038 1 24 hm5C_associated_SNPs_70969 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:233244919-233244940
64251 chr17 76219978 76219978 1 + C T rs141087478 76219976 + 76219956 76219996 41 CTAGAGCTGACAGCTTTGTTCGCGTGGGCAGAGCCTTCCAC CTAGAGCTGACAGCTTTGTTCGTGTGGGCAGAGCCTTCCAC < 41bp 0.742765795576779 0.505974829658732 0.6985901 0.5602071 prediction 0.473581931836095 Functional Loss - BIRC5 ENSG00000268310 CDS Human other chr17:76219976 chr17:76219978 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_70970 0 0 51 TARDBP POSTAR2 DRA001158,DRS012387 chr17:76219707-76220123
64251 chr1 201972397 201972397 1 + G A SKCM 201972394 + 201972374 201972414 41 TTGATCGATGGCTGAATACCCCCGGCTGGCCCCCGTACCTC TTGATCGATGGCTGAATACCCCCAGCTGGCCCCCGTACCTC < 41bp 0.762241831098653 0.525456394279203 0.3189862 0.14338261 prediction 0.473570873638899 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201972394 chr1:201972397 nonsynonymous SNV 0.975 4 24 hm5C_associated_SNPs_70974 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:201972362-201972398
64251 chr17 57812798 57812798 1 + T C STAD 57812797 + 57812777 57812817 41 TTACCTTGCAGTATTTTTCTCTGGAAATCCTTGTAATCTTG TTACCTTGCAGTATTTTTCTCCGGAAATCCTTGTAATCTTG < 41bp 0.762667930783602 0.525897782876383 0.2850275 0.31803113 prediction 0.473540295814438 Functional Loss - VMP1 ENSG00000062716 CDS Human protein_coding chr17:57812797 chr17:57812798 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_70982 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:57812763-57812800
64251 chr16 68894270 68894270 1 + G A UCEC 68894267 + 68894247 68894287 41 TGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCT TGATGCTGCCCCCGATGCAACTCAAAGACTGTACACCAGCT < 41bp 0.775844211746348 0.539074077196987 0.7736821 0.34740382 prediction 0.473540269098722 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68894267 chr16:68894270 nonsynonymous SNV 0.926 0 24 hm5C_associated_SNPs_70983 0 0 2 EIF3H POSTAR2 ENCODE chr16:68894250-68894288
64251 chr11 2939298 2939298 1 + G T LIHC 2939295 + 2939275 2939315 41 CAGACGTCCCGAGGATCTTCCTGGTGAAGGTGGCCTCCAAC CAGACGTCCCGAGGATCTTCCTGTTGAAGGTGGCCTCCAAC < 41bp 0.736762910049054 0.33438527853025 0.8864276 0.49482778 prediction 0.473525820098107 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2939295 chr11:2939298 nonsynonymous SNV 0.120 0 24 hm5C_associated_SNPs_70988 0 0 3 GRWD1 POSTAR2 ENCODE chr11:2939262-2939326
64251 chr2 203155921 203155921 1 + A C PCPG 203155920 + 203155900 203155940 41 AGTTGAAGCAGAAGTGAAAGCAGCTGCAGAGATATCAATGG AGTTGAAGCAGAAGTGAAAGCCGCTGCAGAGATATCAATGG < 41bp 0.779603070889826 0.542863160802399 0.8893547 0.5042281 prediction 0.473479820174852 Functional Loss - NOP58 ENSG00000055044 CDS Human protein_coding chr2:203155920 chr2:203155921 synonymous SNV . 0 22 hm5C_associated_SNPs_70997 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:203155849-203155978
64251 chr3 183882984 183882984 1 + G A UCEC 183882981 + 183882961 183883001 41 GCGGCGGAAGCAGAAGGTTTCTCGGATTGAGCGGGTATGGG GCGGCGGAAGCAGAAGGTTTCTCAGATTGAGCGGGTATGGG < 41bp 0.749849056980515 0.513120173347051 0.79895556 0.38358796 prediction 0.473457767266928 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882981 chr3:183882984 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_71000 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:183882945-183882989
64251 chr7 156976656 156976656 1 + C T CESC 156976654 + 156976634 156976674 41 TTACCAGTCTCTCCTGCCAGCGCGAGCTGTCACGACTCAGC TTACCAGTCTCTCCTGCCAGCGTGAGCTGTCACGACTCAGC < 41bp 0.77431829650862 0.537590850136307 0.34843075 0.39135513 prediction 0.473454892744626 Functional Loss - UBE3C ENSG00000009335 CDS Human protein_coding chr7:156976654 chr7:156976656 nonsynonymous SNV 0.086 0 23 hm5C_associated_SNPs_71001 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:156976635-156976693
64251 chr4 1219303 1219303 1 - G A COAD 1219305 - 1219285 1219325 41 TCTGTGGAGGAGACGGCCGACTCGACGCTGTGCCACATCCT TCTGTGGAGGAGACGGCCGACTTGACGCTGTGCCACATCCT < 41bp 0.820782166844287 0.584060135487458 0.10361746 0.10694581 prediction 0.473444062713657 Functional Loss - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1219305 chr4:1219303 nonsynonymous SNV 0.863 3 23 hm5C_associated_SNPs_71002 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:1219277-1219309
64251 chr5 150856254 150856254 1 + T C STAD 150856253 + 150856233 150856273 41 TCTACATCAGCCTGGGGTGTCTGGGGTACCTGCAATTTGGA TCTACATCAGCCTGGGGTGTCCGGGGTACCTGCAATTTGGA < 41bp 0.736718263339714 0.486155601937323 0.8939713 0.932547 prediction 0.473436526679429 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150856253 chr5:150856254 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_71005 0 0 2 PPIG POSTAR2 ENCODE chr5:150856157-150856281
64251 chr19 1036584 1036584 1 + C T rs557984689 1036582 + 1036562 1036602 41 GTGGGGCTCGCCCGGGTGCCCCCGACTCCTCTCCCTGCCCC GTGGGGCTCGCCCGGGTGCCCCTGACTCCTCTCCCTGCCCC < 41bp 0.785957620208268 0.549251759165976 0.2037409 0.24841681 prediction 0.473411722084583 Functional Loss - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036582 chr19:1036584 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_71015 0 0 3 PCBP2 POSTAR2 ENCODE chr19:1036576-1036633
64251 chr4 71859310 71859310 1 + G T rs574983334 71859308 + 71859288 71859328 41 GCGCTGGAGGCGGGCGAGGGCCGAGGGGCAGCTAGGGAGCG GCGCTGGAGGCGGGCGAGGGCCTAGGGGCAGCTAGGGAGCG < 41bp 0.895806295532627 0.659111955123122 0.71906644 0.45008528 prediction 0.47338868081901 Functional Loss - DCK ENSG00000156136 UTR5 Human protein_coding chr4:71859308 chr4:71859310 . . 0 23 hm5C_associated_SNPs_71019 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:71859309-71859310
64251 chr19 7711139 7711139 1 + C T COAD 7711137 + 7711117 7711157 41 TCCCTGCCCTGCCTGTAGGGCTCGGGGACCTCCAGCCGGCT TCCCTGCCCTGCCTGTAGGGCTTGGGGACCTCCAGCCGGCT < 41bp 0.736690990460056 0.491066193485522 0.26545268 0.3445742 prediction 0.473381980920112 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711137 chr19:7711139 nonsynonymous SNV 0.042 0 23 hm5C_associated_SNPs_71020 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7711136-7711164
64251 chr1 16767271 16767271 1 + G A STAD 16767268 + 16767248 16767288 41 GGCGTCGCGATGGAGGAGAGCGGGTACGAGTCGGTGCTCTG GGCGTCGCGATGGAGGAGAGCGGATACGAGTCGGTGCTCTG < 41bp 0.747483867128282 0.510802581702737 0.8798852 0.81544113 prediction 0.473362570851089 Functional Loss - NECAP2;NECAP2 ENSG00000157191;ENSG00000157191 exonic;splicing Human other chr1:16767268 chr1:16767271 synonymous SNV 0.423 0 24 hm5C_associated_SNPs_71026 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:16767240-16767280
64251 chr2 176981673 176981673 1 + C T LUAD 176981671 + 176981651 176981691 41 CAGCGCCAGCATGTACATGCCACCACCTAGCGCAGACATGG CAGCGCCAGCATGTACATGCCATCACCTAGCGCAGACATGG < 41bp 0.736670060239595 0.462399375928227 0.024147213 0.032545567 prediction 0.473340120479191 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981671 chr2:176981673 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_71032 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:176981640-176981678
64251 chr7 98985760 98985760 1 + C T COAD 98985758 + 98985738 98985778 41 GGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCA GGGCCGCACATGGAAGCCCACGTTGGTCATCCTGCGGATCA < 41bp 0.804562930663095 0.56789868656215 0.16300365 0.21534973 prediction 0.47332848820189 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985758 chr7:98985760 synonymous SNV . 0 23 hm5C_associated_SNPs_71034 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985750-98985774
64251 chr7 6628428 6628428 1 + C T SKCM 6628426 + 6628406 6628446 41 TTGTCCCCTTGTGGCCTGGCCTCCGTCAGCAGAGCCCCAAG TTGTCCCCTTGTGGCCTGGCCTTCGTCAGCAGAGCCCCAAG < 41bp 0.807179620208483 0.570519262794244 0.049248904 0.037632406 prediction 0.473320714828478 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628426 chr7:6628428 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_71037 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6628403-6628452
64251 chr11 65823050 65823050 1 + G T UCEC 65823048 + 65823028 65823068 41 AACATGAGCTCTTGGAGCAGCAGAAGCGGGTAATACCCCTC AACATGAGCTCTTGGAGCAGCATAAGCGGGTAATACCCCTC < 41bp 0.736659015910493 0.383948588993843 0.8788214 0.7085786 prediction 0.473318031820987 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65823048 chr11:65823050 nonsynonymous SNV 0.974 2 23 hm5C_associated_SNPs_71039 0 0 18 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:65823020-65823050
64251 chr15 49575910 49575910 1 + G T SARC 49575908 + 49575888 49575928 41 GGTGATGGAGTGTCGGCTGGCTGCGAAGGTATGAACTTGGC GGTGATGGAGTGTCGGCTGGCTTCGAAGGTATGAACTTGGC < 41bp 0.736655385901566 0.406355335680289 0.24503934 0.2270706 prediction 0.473310771803132 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49575908 chr15:49575910 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_71043 0 0 3 DDX24 POSTAR2 ENCODE chr15:49575837-49575916
64251 chr13 103498673 103498673 1 + C T LUSC 103498671 + 103498651 103498691 41 GCTCCGGGCGGCAGGTCAGCCCCGAAGCGCTGGAAGGGAAG GCTCCGGGCGGCAGGTCAGCCCTGAAGCGCTGGAAGGGAAG < 41bp 0.736650846635127 0.485737096431362 0.37392938 0.27503407 prediction 0.473301693270255 Functional Loss - ERCC5 ENSG00000134899 CDS Human protein_coding chr13:103498671 chr13:103498673 synonymous SNV . 0 23 hm5C_associated_SNPs_71046 0 0 1 FXR2 POSTAR2 ENCODE chr13:103498606-103498691
64251 chr2 33586542 33586542 1 + T C rs144016941 33586541 + 33586521 33586561 41 AGGGAAAGGTTTTGTGCCTGCTGGAGAATCATCTTCTGAAG AGGGAAAGGTTTTGTGCCTGCCGGAGAATCATCTTCTGAAG < 41bp 0.748522672380644 0.511877988164425 0.41165173 0.80515456 prediction 0.473289368432438 Functional Loss - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33586541 chr2:33586542 synonymous SNV . 0 22 hm5C_associated_SNPs_71047 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:33586508-33586542
64251 chr16 67179310 67179310 1 + G A COAD 67179307 + 67179287 67179327 41 GATGGTCAGACAGAAACATGCACGACCTACAGCAAGGTGAG GATGGTCAGACAGAAACATGCACAACCTACAGCAAGGTGAG < 41bp 0.736996699616216 0.500353380602237 0.31617254 0.10047594 prediction 0.473286638027959 Functional Loss - C16orf70 ENSG00000125149 CDS Human protein_coding chr16:67179307 chr16:67179310 synonymous SNV . 0 24 hm5C_associated_SNPs_71049 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:67179267-67179345
64251 chr7 37988591 37988591 1 + G T LUSC 37988589 + 37988569 37988609 41 TTTGAAGACCAGTACTCCATCGGGGGGCCTCAGGAGCAGAT TTTGAAGACCAGTACTCCATCGTGGGGCCTCAGGAGCAGAT < 41bp 0.894941399902647 0.658302184163454 0.9622518 0.9303725 prediction 0.473278431478386 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37988589 chr7:37988591 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_71050 0 0 4 NOL12 POSTAR2 ENCODE chr7:37988565-37988609
64251 chr1 1336006 1336006 1 + C T rs111876693 1336004 + 1335984 1336024 41 GGCTGGTAGCTCAGGGATGTCTCGTCTGTGAGTTACAGCTG GGCTGGTAGCTCAGGGATGTCTTGTCTGTGAGTTACAGCTG < 41bp 0.73663751498999 0.487767282008536 0.081346005 0.038689643 prediction 0.473275029979979 Functional Loss - LOC148413 ENSG00000224870 CDS Human processed_transcript chr1:1336004 chr1:1336006 synonymous SNV . 0 23 hm5C_associated_SNPs_71053 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:1336006-1336043
64251 chr19 15795970 15795970 1 + G A SKCM 15795967 + 15795947 15795987 41 AGCGCTGCCGACAGGAGGTGCAAGAGCTTCTGAAGGACCGC AGCGCTGCCGACAGGAGGTGCAAAAGCTTCTGAAGGACCGC < 41bp 0.782550029730351 0.545919603157732 0.45118296 0.33708495 prediction 0.473260853145239 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15795967 chr19:15795970 nonsynonymous SNV 0.753 1 24 hm5C_associated_SNPs_71057 0 0 3 PPIG POSTAR2 ENCODE chr19:15795943-15795992
64251 chr19 7529551 7529551 1 + G A HNSC 7529548 + 7529528 7529568 41 GCTCAGTGACAGTGACATTCCTGGGAGCTCTGAGGAATCGC GCTCAGTGACAGTGACATTCCTGAGAGCTCTGAGGAATCGC < 41bp 0.759973979026524 0.523345981161591 0.27198088 0.17315096 prediction 0.473255995729865 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7529548 chr19:7529551 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_71058 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:7529531-7529554
64251 chr6 111409054 111409054 1 + G A COAD 111409051 + 111409031 111409071 41 GGGGCCGCTCCGCCGCCCGGCCCGGGACCCTCGGACAGCCC GGGGCCGCTCCGCCGCCCGGCCCAGGACCCTCGGACAGCCC < 41bp 0.761316536140158 0.52469113456141 0.15261614 0.15131846 prediction 0.473250803157497 Functional Loss - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111409051 chr6:111409054 synonymous SNV . 0 24 hm5C_associated_SNPs_71061 0 0 1 RPS3 POSTAR2 ENCODE chr6:111409007-111409110
64251 chr9 117087382 117087382 1 + G A rs183397033 117087379 + 117087359 117087399 41 TGGGAGAGTTCTACGAAGCTCTCGACTGCTTGCGCATTCCC TGGGAGAGTTCTACGAAGCTCTCAACTGCTTGCGCATTCCC < 41bp 0.762047191253638 0.525434149736028 0.7765126 0.44848984 prediction 0.47322608303522 Functional Loss - ORM1 ENSG00000229314 CDS Human protein_coding chr9:117087379 chr9:117087382 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_71065 0 0 6 LARP4 POSTAR2 ENCODE chr9:117087373-117087402
64251 chr19 10782177 10782177 1 + A T LUAD 10782173 + 10782153 10782193 41 AGAAGCCCACAACCGCCCTCCTGGACAAGGTGGCCGACAAC AGAAGCCCACAACCGCCCTCCTGGTCAAGGTGGCCGACAAC < 41bp 0.736576761252911 0.405260165791981 0.253016 0.11218086 prediction 0.473153522505822 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10782173 chr19:10782177 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_71084 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10782157-10782181
64251 chr20 23345832 23345832 1 + C T COAD 23345830 + 23345810 23345850 41 CAAAGCCCGGACAGGGTGGGCACGGAGATGGAGCAGGTTTC CAAAGCCCGGACAGGGTGGGCATGGAGATGGAGCAGGTTTC < 41bp 0.771184612324969 0.534611454316545 0.51092595 0.47722098 prediction 0.473146316016849 Functional Loss - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345830 chr20:23345832 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_71086 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:23345825-23345858
64251 chr1 154947386 154947386 1 + G C BLCA 154947385 + 154947365 154947405 41 ATAGAATTGGCGCATGCGTACGAGGTGCGAACGGGCAATGG ATAGAATTGGCGCATGCGTACCAGGTGCGAACGGGCAATGG < 41bp 0.736564210494204 0.433966924920461 0.8739375 0.45862672 prediction 0.473128420988407 Functional Loss - CKS1B ENSG00000173207 CDS Human protein_coding chr1:154947385 chr1:154947386 synonymous SNV . 0 22 hm5C_associated_SNPs_71092 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154947301-154947388
64251 chr1 110882424 110882424 1 + A C UCEC 110882420 + 110882400 110882440 41 AGTTATAGCTCCCCGAGCACCAAAAATTCTTCGGGCGGGGG AGTTATAGCTCCCCGAGCACCAAACATTCTTCGGGCGGGGG < 41bp 0.736563539019563 0.348733533923185 0.279525 0.20041138 prediction 0.473127078039125 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882420 chr1:110882424 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_71093 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:110882416-110882442
64251 chr15 75093361 75093361 1 + G C LUAD 75093360 + 75093340 75093380 41 CGTCCTGCCCCAGGCAACTGCGGCATAGCAACCTGGTGCAG CGTCCTGCCCCAGGCAACTGCCGCATAGCAACCTGGTGCAG < 41bp 0.736561972444795 0.409160148132766 0.8652542 0.15797433 prediction 0.47312394488959 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75093360 chr15:75093361 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_71094 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:75093360-75093380
64251 chr8 25337499 25337499 1 + A C LUAD 25337498 + 25337478 25337518 41 TTCGCCTGACACGTTCACAGCAGAAGTGAGCTCAGACGCAG TTCGCCTGACACGTTCACAGCCGAAGTGAGCTCAGACGCAG < 41bp 0.736552494040789 0.492914796011626 0.33412242 0.26378602 prediction 0.473104988081578 Functional Loss - CDCA2 ENSG00000184661 CDS Human protein_coding chr8:25337498 chr8:25337499 synonymous SNV . 0 22 hm5C_associated_SNPs_71097 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:25337450-25337501
64251 chr22 38870608 38870608 1 + A C rs568333738 38870604 + 38870584 38870624 41 GACCTGTTCACCAACTTCATCTCCATCTACAACACAGTAAT GACCTGTTCACCAACTTCATCTCCCTCTACAACACAGTAAT < 41bp 0.736538187597622 0.290978734217084 0.9170948 0.029341042 prediction 0.473076375195245 Functional Loss - KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38870604 chr22:38870608 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_71103 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:38870564-38870616
64251 chr15 38773633 38773633 1 + G A HNSC 38773630 + 38773610 38773650 41 AGGACAAGTAGTGGCACCAGCCGGGAGAAGACCGCATGTGC AGGACAAGTAGTGGCACCAGCCGAGAGAAGACCGCATGTGC < 41bp 0.765369185611018 0.528847909974781 0.8951094 0.42919755 prediction 0.473042551272472 Functional Loss - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38773630 chr15:38773633 synonymous SNV . 0 24 hm5C_associated_SNPs_71115 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:38773589-38773635
64251 chrX 101971349 101971349 1 + G A BLCA 101971346 + 101971326 101971366 41 CCACAAGCCCCTTTGGAATTCCCGAAGAGGCTTCTGAAATG CCACAAGCCCCTTTGGAATTCCCAAAGAGGCTTCTGAAATG < 41bp 0.746309169741619 0.509790785437839 0.08849889 0.050077677 prediction 0.47303676860756 Functional Loss - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971346 chrX:101971349 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_71117 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chrX:101971323-101971361
64251 chr7 143001776 143001776 1 + C T GBM 143001774 + 143001754 143001794 41 CTTTTGGTTGCAGGGACTGCCGCCATGCGGAACACCAAACG CTTTTGGTTGCAGGGACTGCCGTCATGCGGAACACCAAACG < 41bp 0.841502320915846 0.604989693997162 0.81091976 0.3473896 prediction 0.473025253837369 Functional Loss - CASP2 ENSG00000106144 CDS Human protein_coding chr7:143001774 chr7:143001776 nonsynonymous SNV 0.946 4 23 hm5C_associated_SNPs_71119 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:143001755-143001798
64251 chr5 172386880 172386880 1 + A C KIRC 172386876 + 172386856 172386896 41 CGCCCTTTGTAGAGGGTCACCATGAAGTTCAATCCCTTCGT CGCCCTTTGTAGAGGGTCACCATGCAGTTCAATCCCTTCGT < 41bp 0.779217777501585 0.542708553340731 0.12998423 0.06676036 prediction 0.473018448321709 Functional Loss - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172386876 chr5:172386880 nonsynonymous SNV 0.953 2 25 hm5C_associated_SNPs_71120 0 0 2 DDX3X POSTAR2 ENCODE chr5:172386865-172386889
64251 chr22 20909385 20909385 1 + C T COAD 20909383 + 20909363 20909403 41 GGGCAGCCGCCTCCTGGGACCTCGGGGATGGCCCCTCACAG GGGCAGCCGCCTCCTGGGACCTTGGGGATGGCCCCTCACAG < 41bp 0.752520268315506 0.516034229246561 0.54513764 0.2496 prediction 0.472972078137889 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20909383 chr22:20909385 nonsynonymous SNV 0.864 3 23 hm5C_associated_SNPs_71132 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:20909369-20909403
64251 chr15 85383851 85383851 1 + G A SKCM 85383848 + 85383828 85383868 41 CGGGCGCCTGGGGAGAGTCCCAAGGGGAAGGCACCCCTCAG CGGGCGCCTGGGGAGAGTCCCAAAGGGAAGGCACCCCTCAG < 41bp 0.782735296509527 0.546251254411672 0.94569534 0.91574025 prediction 0.472968084195709 Functional Loss - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85383848 chr15:85383851 synonymous SNV . 0 24 hm5C_associated_SNPs_71133 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85383846-85383874
64251 chr9 132397613 132397613 1 + G T COAD 132397611 + 132397591 132397631 41 GTGATTCTGGACGACGTGGACAGCAGCGTGTGCCGGGACCT GTGATTCTGGACGACGTGGACATCAGCGTGTGCCGGGACCT < 41bp 0.891214823456303 0.654731277518771 0.66075593 0.31663722 prediction 0.472967091875063 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397611 chr9:132397613 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_71134 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:132397591-132397618
64251 chr8 118533169 118533169 1 + G T LUAD 118533166 + 118533146 118533186 41 ATGGCGCCCGGGCCCTTCGCCGGGCCCCAGGCTCAGCAGGC ATGGCGCCCGGGCCCTTCGCCGGTCCCCAGGCTCAGCAGGC < 41bp 0.919178866475069 0.68270204275965 0.92040193 0.8594165 prediction 0.472953647430838 Functional Loss - MED30 ENSG00000164758 CDS Human protein_coding chr8:118533166 chr8:118533169 synonymous SNV . 0 24 hm5C_associated_SNPs_71138 0 0 4 DDX3X POSTAR2 ENCODE chr8:118533163-118533277
64251 chr15 83788397 83788397 1 + T C GBM 83788396 + 83788376 83788416 41 GGGATGGCTCTGCTCATTATCTGATGTACCTGGTGATGGTG GGGATGGCTCTGCTCATTATCCGATGTACCTGGTGATGGTG < 41bp 0.736475071037497 0.496263541182388 0.79326576 0.902946 prediction 0.472950142074994 Functional Loss - TM6SF1 ENSG00000136404 CDS Human protein_coding chr15:83788396 chr15:83788397 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_71139 0 0 1 SF3B4 POSTAR2 ENCODE chr15:83788390-83788456
64251 chr22 50988282 50988282 1 + G A UCEC 50988279 + 50988259 50988299 41 CTGGGGGGACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCC CTGGGGGGACTGCCCAGTTCCAGACCAAGGAGCTGCAGCCC < 41bp 0.777594860523917 0.541127608226958 0.9083468 0.46377957 prediction 0.472934504593918 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50988279 chr22:50988282 nonsynonymous SNV 0.965 0 24 hm5C_associated_SNPs_71142 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50988275-50988318
64251 chr3 183860047 183860047 1 + C T HNSC 183860045 + 183860025 183860065 41 GTGGTCGTGGGCCCAAATATCACGCTGCCTGAGGGCTCGGT GTGGTCGTGGGCCCAAATATCATGCTGCCTGAGGGCTCGGT < 41bp 0.736467246429598 0.467277641324618 0.5625751 0.7370883 prediction 0.472934492859197 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860045 chr3:183860047 nonsynonymous SNV 0.912 1 23 hm5C_associated_SNPs_71143 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:183860022-183860065
64251 chr3 20156432 20156432 1 + G A COAD 20156429 + 20156409 20156449 41 AAAACTCTCCCATCTGGGATCAGGATTTTCTCTCAGCCTCT AAAACTCTCCCATCTGGGATCAGAATTTTCTCTCAGCCTCT < 41bp 0.755877061952455 0.519409866969365 0.8806455 0.40330136 prediction 0.47293438996618 Functional Loss - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20156429 chr3:20156432 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_71144 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:20156406-20156438
64251 chr12 6624076 6624076 1 + T C HNSC 6624075 + 6624055 6624095 41 TGTGCATTTTGCTAGATCACCTGGATGGAGAAGTAGGTGGT TGTGCATTTTGCTAGATCACCCGGATGGAGAAGTAGGTGGT < 41bp 0.788293081651757 0.551825964124553 0.41599512 0.49852616 prediction 0.472934235054408 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6624075 chr12:6624076 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_71145 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6623967-6624079
64251 chr15 41021022 41021022 1 + G A SKCM 41021019 + 41020999 41021039 41 ATCAGCCATGATGGTAGAATCTAGGTATGTGTTCAGTATAA ATCAGCCATGATGGTAGAATCTAAGTATGTGTTCAGTATAA < 41bp 0.738293954185872 0.501830336521685 0.23257792 0.14132485 prediction 0.472927235328374 Functional Loss - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41021019 chr15:41021022 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_71148 0 0 2 RPS3 POSTAR2 ENCODE chr15:41020961-41021023
64251 chrX 56591627 56591627 1 + G T LUAD 56591624 + 56591604 56591644 41 TCCTGCAGCAGATGCAGAATCCAGACACACTATCAGCCATG TCCTGCAGCAGATGCAGAATCCATACACACTATCAGCCATG < 41bp 0.736461483488108 0.347216442146334 0.29934445 0.12652588 prediction 0.472922966976217 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591624 chrX:56591627 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_71150 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:56591620-56591640
64251 chr6 117043316 117043316 1 + C T PRAD 117043314 + 117043294 117043334 41 ACCTTGCTTAAATGTCCTGTCACGACTGTTGTTTAGCAGTG ACCTTGCTTAAATGTCCTGTCATGACTGTTGTTTAGCAGTG < 41bp 0.842959508950552 0.606500161179188 0.2663652 0.27004707 prediction 0.472918695542727 Functional Loss - KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117043314 chr6:117043316 stopgain 0.966 1 23 hm5C_associated_SNPs_71152 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:117043288-117043368
64251 chr9 136310084 136310084 1 + C T SKCM 136310082 + 136310062 136310102 41 AGGGGCAGATGGCCTGGAGGCTCCAGTGACTGAGGGGCCTG AGGGGCAGATGGCCTGGAGGCTTCAGTGACTGAGGGGCCTG < 41bp 0.798382077746404 0.561924628114506 0.8595661 0.22359052 prediction 0.472914899263797 Functional Loss - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136310082 chr9:136310084 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_71153 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:136310055-136310093
64251 chr9 138395594 138395594 1 + G A COAD 138395591 + 138395571 138395611 41 CTGTGGCGAGTACGCCCACACTCGCTACTTCAGGGGCGGCA CTGTGGCGAGTACGCCCACACTCACTACTTCAGGGGCGGCA < 41bp 0.752214765879569 0.515759632445809 0.16580063 0.028364658 prediction 0.472910266867521 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395591 chr9:138395594 nonsynonymous SNV 0.929 2 24 hm5C_associated_SNPs_71154 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395550-138395602
64251 chr19 50910593 50910593 1 + G A CESC 50910590 + 50910570 50910610 41 TTCTCCCCTCCCAGGCCATGCACGAGGGGCTGCTGATGCCC TTCTCCCCTCCCAGGCCATGCACAAGGGGCTGCTGATGCCC < 41bp 0.777721734351463 0.541268834803796 0.068181485 0.02602446 prediction 0.472905799095334 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50910590 chr19:50910593 nonsynonymous SNV 0.959 0 24 hm5C_associated_SNPs_71157 1 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50910580-50910600
64251 chr7 155090172 155090172 1 + G T LUSC 155090169 + 155090149 155090189 41 GGTGCCCCGGACGCTGACCCCGCGCCCAGGGGCCGCAGTGC GGTGCCCCGGACGCTGACCCCGCTCCCAGGGGCCGCAGTGC < 41bp 0.920770119990151 0.684320693649964 0.302254 0.081177175 prediction 0.472898852680374 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090169 chr7:155090172 synonymous SNV . 0 24 hm5C_associated_SNPs_71159 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:155090160-155090200
64251 chr3 49753337 49753337 1 + C T GBM 49753335 + 49753315 49753355 41 TGTGCCACCTGCTTTGACCTCTCGGTCAGCCTGCTGCGTGT TGTGCCACCTGCTTTGACCTCTTGGTCAGCCTGCTGCGTGT < 41bp 0.736447319878349 0.45055329412157 0.24782014 0.12896094 prediction 0.472894639756697 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49753335 chr3:49753337 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_71161 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49753318-49753356
64251 chr9 134073033 134073033 1 + G A rs191753687 134073030 + 134073010 134073050 41 CCCCCGGTGTTAGGGAAGCACACGGAGCCCCCTGTGACATC CCCCCGGTGTTAGGGAAGCACACAGAGCCCCCTGTGACATC < 41bp 0.752533533668547 0.516091175586428 0.17131722 0.04095632 prediction 0.472884716164238 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134073030 chr9:134073033 synonymous SNV . 0 24 hm5C_associated_SNPs_71162 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:134073027-134073069
64251 chr11 703075 703075 1 + C T BLCA 703073 + 703053 703093 41 TGTTGTGGGCGGACTGGGCCCTCAGCGCCACGCTCCTGGCC TGTTGTGGGCGGACTGGGCCCTTAGCGCCACGCTCCTGGCC < 41bp 0.736441808709801 0.485371528372192 0.28233767 0.11270508 prediction 0.472883617419601 Functional Loss - TMEM80 ENSG00000177042 CDS Human protein_coding chr11:703073 chr11:703075 synonymous SNV . 0 23 hm5C_associated_SNPs_71163 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:703039-703075
64251 chr12 6954785 6954785 1 + G A STAD 6954782 + 6954762 6954802 41 GGAGAGGCCATCTGCACGGGCTCGGATGACGCTTCCTGCCG GGAGAGGCCATCTGCACGGGCTCAGATGACGCTTCCTGCCG < 41bp 0.778791824629093 0.542351572926326 0.081130356 0.04902506 prediction 0.472880503405535 Functional Loss - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6954782 chr12:6954785 synonymous SNV . 0 24 hm5C_associated_SNPs_71166 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6954776-6954806
64251 chrX 17768275 17768275 1 + G T BRCA 17768273 + 17768253 17768293 41 AGTGCATCCCTCAGATTTCTCTGAGCATAATTGTCAGCCGT AGTGCATCCCTCAGATTTCTCTTAGCATAATTGTCAGCCGT < 41bp 0.736435299332901 0.392516352706159 0.6634762 0.41211396 prediction 0.472870598665802 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768273 chrX:17768275 stopgain 0.000 0 23 hm5C_associated_SNPs_71168 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr8 11615876 11615876 1 + A C rs7830178 11615875 + 11615855 11615895 41 CTCGGCCCTGAAGCTCTCCCCACAAGGCTATGCGTCTCCCG CTCGGCCCTGAAGCTCTCCCCCCAAGGCTATGCGTCTCCCG < 41bp 0.736434695340422 0.478224100561161 0.09726861 0.044940412 prediction 0.472869390680844 Functional Loss - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11615875 chr8:11615876 synonymous SNV . 0 22 hm5C_associated_SNPs_71169 1 0 1 PCBP2 POSTAR2 ENCODE chr8:11615832-11615882
64251 chr14 93275863 93275863 1 + C T UCEC 93275861 + 93275841 93275881 41 AGCCTTACAGAGTGAAAAATCACGGTAGGTGATTCTATGAA AGCCTTACAGAGTGAAAAATCATGGTAGGTGATTCTATGAA < 41bp 0.816677270480627 0.580245263182251 0.63094115 0.56855905 prediction 0.472864014596752 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93275861 chr14:93275863 stopgain 0.926 0 23 hm5C_associated_SNPs_71171 0 0 1 SF3B1 POSTAR2 ENCODE chr14:93275836-93275865
64251 chr19 10793909 10793909 1 + G C LUAD 10793905 + 10793885 10793925 41 TACGAGCTCATCTCCGAGACCGGGGGCAGCCACGACAAGCG TACGAGCTCATCTCCGAGACCGGGCGCAGCCACGACAAGCG < 41bp 0.855131341853391 0.618703574446415 0.9125829 0.8465564 prediction 0.472855534813952 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10793905 chr19:10793909 nonsynonymous SNV 0.804 3 25 hm5C_associated_SNPs_71173 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:10793822-10793919
64251 chr9 129645610 129645610 1 + C T rs61133304 129645608 + 129645588 129645628 41 TTTTCACTCAGGCTTGGGGCCTCCAGCGAGGTTTCCAGAGC TTTTCACTCAGGCTTGGGGCCTTCAGCGAGGTTTCCAGAGC < 41bp 0.736423462616823 0.477668141527989 0.945359 0.07334727 prediction 0.472846925233645 Functional Loss - ZBTB34 ENSG00000177125 UTR3 Human protein_coding chr9:129645608 chr9:129645610 . . 0 23 hm5C_associated_SNPs_71174 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:129645580-129645613
64251 chr1 212788580 212788580 1 + G A UCEC 212788577 + 212788557 212788597 41 TCACTGTCAGCGACAGACCCCTCGGGGTGTCCATCACAAAA TCACTGTCAGCGACAGACCCCTCAGGGTGTCCATCACAAAA < 41bp 0.753023297663044 0.516600275421643 0.040590584 0.048279434 prediction 0.472846044482804 Functional Loss - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212788577 chr1:212788580 nonsynonymous SNV 0.166 0 24 hm5C_associated_SNPs_71175 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:212788556-212788592
64251 chr15 41549162 41549162 1 + G T BLCA 41549159 + 41549139 41549179 41 GCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTT GCCATCAACCCACTGGGGGACCGTATCATCAATGCCTTCTT < 41bp 0.736416995935411 0.341123801061619 0.20587984 0.022301793 prediction 0.472833991870822 Functional Loss - CHP1 ENSG00000187446 CDS Human protein_coding chr15:41549159 chr15:41549162 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_71178 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:41549134-41549165
64251 chr19 1440105 1440105 1 + C T UCEC 1440103 + 1440083 1440123 41 AGCAGCACTCCCTGCTGAAGCGCCTGCGCAAGGCCAAGAAG AGCAGCACTCCCTGCTGAAGCGTCTGCGCAAGGCCAAGAAG < 41bp 0.736409654293429 0.488064975906523 0.43236774 0.44532797 prediction 0.472819308586858 Functional Loss - RPS15 ENSG00000115268 CDS Human protein_coding chr19:1440103 chr19:1440105 synonymous SNV . 0 23 hm5C_associated_SNPs_71180 0 0 3 DDX55 POSTAR2 ENCODE chr19:1440079-1440108
64251 chr22 50649116 50649116 1 + G T LGG 50649114 + 50649094 50649134 41 AACACCGGCCGCTACGCGTACAGCAAGCAGCCCGAGGTGTG AACACCGGCCGCTACGCGTACATCAAGCAGCCCGAGGTGTG < 41bp 0.736395776625415 0.384493798841414 0.15989584 0.04612145 prediction 0.472791553250831 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649114 chr22:50649116 unknown 0.920 1 23 hm5C_associated_SNPs_71186 0 0 2 NOL12 POSTAR2 ENCODE chr22:50649096-50649183
64251 chr12 7037504 7037504 1 + G A rs193192226 7037501 + 7037481 7037521 41 GCCCCCCAGAGGCGCCGGAGCCCGGAATCCCGCTCGGAGCC GCCCCCCAGAGGCGCCGGAGCCCAGAATCCCGCTCGGAGCC < 41bp 0.755180346482991 0.518788267978619 0.835456 0.5426271 prediction 0.472784157008745 Functional Loss - ATN1 ENSG00000111676 UTR5 Human protein_coding chr12:7037501 chr12:7037504 . . 0 24 hm5C_associated_SNPs_71187 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7037495-7037528
64251 chr19 58718367 58718367 1 + G T LUAD 58718364 + 58718344 58718384 41 ATGACAGGTCCCCGGGAGCCCTGGACCAGCTCCGAGAGCTG ATGACAGGTCCCCGGGAGCCCTGTACCAGCTCCGAGAGCTG < 41bp 0.86163772039744 0.62526509009615 0.6813132 0.24565059 prediction 0.472745260602579 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58718364 chr19:58718367 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_71192 0 0 1 FXR2 POSTAR2 ENCODE chr19:58718361-58718411
64251 chr5 235284 235284 1 + G A PAAD 235281 + 235261 235301 41 GCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCAC GCTGTGGCCCTGAGAAAGATCACATCTACCTGCAGCTGCAC < 41bp 0.766474605084815 0.530104754725066 0.32456976 0.15371013 prediction 0.472739700719497 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:235281 chr5:235284 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_71193 2 0 1 RPS3 POSTAR2 ENCODE chr5:235282-235385
64251 chr19 8316045 8316045 1 + G T ESCA 8316042 + 8316022 8316062 41 CGTGGACAGAGCTAGAAGACCGGGATGGCCGTGTCTACCCC CGTGGACAGAGCTAGAAGACCGGTATGGCCGTGTCTACCCC < 41bp 0.922603572570456 0.686235813072405 0.7790802 0.12822676 prediction 0.472735518996101 Functional Loss - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8316042 chr19:8316045 nonsynonymous SNV 0.230 2 24 hm5C_associated_SNPs_71194 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:8316015-8316048
64251 chr5 150632828 150632828 1 + C T CESC 150632826 + 150632806 150632846 41 TGATCGCCCTGGGCTTGCTTCTCGCGGCCCCTGCGCAAGCC TGATCGCCCTGGGCTTGCTTCTTGCGGCCCCTGCGCAAGCC < 41bp 0.775764392518704 0.539399184971575 0.30694222 0.09414777 prediction 0.472730415094259 Functional Loss - GM2A ENSG00000196743 CDS Human protein_coding chr5:150632826 chr5:150632828 synonymous SNV . 0 23 hm5C_associated_SNPs_71196 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:150632796-150632828
64251 chr17 7577581 7577581 1 - A G COAD 7577582 - 7577562 7577602 41 TCTGACTGTACCACCATCCACTACAACTACATGTGTAACAG TCTGACTGTACCACCATCCACCACAACTACATGTGTAACAG < 41bp 0.776477065576714 0.540113740581153 0.6024087 0.015852273 prediction 0.472726649991122 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577582 chr17:7577581 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_71197 15 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7577567-7577594
64251 chr20 5987125 5987125 1 + G C rs568654866 5987121 + 5987101 5987141 41 CGGGCGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCG CGGGCGCGGGGAAGGCGGCTCCCACGCCAGCGGCCGGAGCG < 41bp 0.82417137716781 0.587822844383568 0.5746095 0.27844527 prediction 0.472697065568484 Functional Loss - CRLS1 ENSG00000088766 CDS Human protein_coding chr20:5987121 chr20:5987125 nonsynonymous SNV 0.025 0 25 hm5C_associated_SNPs_71202 0 0 6 DDX3X POSTAR2 ENCODE chr20:5987073-5987179
64251 chr13 37580266 37580266 1 + A C GBM 37580265 + 37580245 37580285 41 AATCAAGTTCACAGATAATTCAGAAAGAGGACTTATGCATT AATCAAGTTCACAGATAATTCCGAAAGAGGACTTATGCATT < 41bp 0.782380446055548 0.546035335512714 0.15535206 0.1112465 prediction 0.47269022108567 Functional Loss - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37580265 chr13:37580266 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_71203 0 0 1 EFTUD2 POSTAR2 ENCODE chr13:37580202-37580269
64251 chr16 68390655 68390655 1 + G A UCEC 68390652 + 68390632 68390672 41 TGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC TGGATGGAGTACCACCTGACCCCAGAGTGCACGCTCAGCAC < 41bp 0.763364773463571 0.527022712156728 0.13538912 0.19677898 prediction 0.472684122613686 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390652 chr16:68390655 synonymous SNV . 0 24 hm5C_associated_SNPs_71205 0 0 3 PPIG POSTAR2 ENCODE chr16:68390631-68390704
64251 chr15 22933766 22933766 1 + G A COAD 22933763 + 22933743 22933783 41 TTCAGTCTCTGCAGCAGCAGCTCGAAGTGATTTCTGGCTAC TTCAGTCTCTGCAGCAGCAGCTCAAAGTGATTTCTGGCTAC < 41bp 0.762669229805171 0.526335094100729 0.5688276 0.7462827 prediction 0.472668271408883 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22933763 chr15:22933766 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_71209 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:22933746-22933779
64251 chr1 229438646 229438646 1 + G T LUAD 229438644 + 229438624 229438664 41 AAAGAATGGGCTCAGGTATTCAGTACGGAGATGCTGCCTTG AAAGAATGGGCTCAGGTATTCATTACGGAGATGCTGCCTTG < 41bp 0.892527186550938 0.6561958157151 0.23311603 0.13316488 prediction 0.472662741671677 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229438644 chr1:229438646 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_71211 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:229438589-229438677
64251 chr22 50956689 50956689 1 + A T LUAD 50956685 + 50956665 50956705 41 ATGGAACCAGCGGGCGTTTCCCCCATGCCAGGGACCCAGAA ATGGAACCAGCGGGCGTTTCCCCCTTGCCAGGGACCCAGAA < 41bp 0.736329121651457 0.397159175336759 0.4988836 0.10230833 prediction 0.472658243302914 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50956685 chr22:50956689 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_71213 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50956638-50956703
64251 chr12 81627233 81627233 1 + G T BRCA 81627231 + 81627211 81627251 41 TGTTGCAGGTCACAGAATTTCTGCAGGCGCCATTGAAGAGG TGTTGCAGGTCACAGAATTTCTTCAGGCGCCATTGAAGAGG < 41bp 0.877466331471245 0.641143369020068 0.124914646 0.12407291 prediction 0.472645924902354 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81627231 chr12:81627233 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_71216 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:81627137-81627252
64251 chr10 17750824 17750824 1 + C T KIRC 17750822 + 17750802 17750842 41 GCCTACCTGGTTGCAGGGAACGCGCAGATGAGCCACCTCCA GCCTACCTGGTTGCAGGGAACGTGCAGATGAGCCACCTCCA < 41bp 0.820282595191193 0.583960963881083 0.7363924 0.53768384 prediction 0.47264326262022 Functional Loss - STAM ENSG00000136738 CDS Human protein_coding chr10:17750822 chr10:17750824 nonsynonymous SNV 0.827 0 23 hm5C_associated_SNPs_71217 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr10:17750778-17750826
64251 chr20 43052891 43052891 1 + G A SKCM 43052888 + 43052868 43052908 41 ACCTGTTGCAGGAGATGCTGCTGGGAGGTCCGTGCCAAGCC ACCTGTTGCAGGAGATGCTGCTGAGAGGTCCGTGCCAAGCC < 41bp 0.769621233027699 0.533302506967107 0.4051561 0.16582164 prediction 0.472637452121184 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43052888 chr20:43052891 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_71219 0 0 5 EFTUD2 POSTAR2 ENCODE chr20:43052869-43052964
64251 chr10 133761153 133761153 1 + G T ESCA 133761151 + 133761131 133761171 41 GATGACCAGAGACTACCTGTCGGTGAAGGTGTGGGACCTCA GATGACCAGAGACTACCTGTCGTTGAAGGTGTGGGACCTCA < 41bp 0.736309854390684 0.385703937685761 0.29826277 0.091765195 prediction 0.472619708781367 Functional Loss - PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133761151 chr10:133761153 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_71223 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:133761116-133761162
64251 chr11 114315275 114315275 1 + A C BLCA 114315274 + 114315254 114315294 41 CTCTTGCAGTCTGGCCTTACCAAGGCAGTGAAGGAGAGTAC CTCTTGCAGTCTGGCCTTACCCAGGCAGTGAAGGAGAGTAC < 41bp 0.783478800176889 0.547171585270689 0.8813361 0.39335775 prediction 0.4726144298124 Functional Loss - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114315274 chr11:114315275 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_71224 0 0 7 DDX42 POSTAR2 ENCODE chr11:114315226-114315291
64251 chr6 25726441 25726441 1 - C G LUAD 25726445 - 25726425 25726465 41 TTTGGGCGGCGTGACCATTGCCCAGGGCGGAGTCCTGCCTA TTTGGGCGGCGTGACCATTGCCCACGGCGGAGTCCTGCCTA < 41bp 0.736305468346894 0.465961951232825 0.52882344 0.3006147 prediction 0.472610936693789 Functional Loss - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726445 chr6:25726441 nonsynonymous SNV 0.131 2 25 hm5C_associated_SNPs_71225 0 0 2 YBX3 POSTAR2 ENCODE chr6:25726401-25726460
64251 chr6 27833221 27833221 1 + G C CESC 27833220 + 27833200 27833240 41 GTCTCCAGTTCCCCGTGGGCCGAGTGCACCGACTGCTCCGC GTCTCCAGTTCCCCGTGGGCCCAGTGCACCGACTGCTCCGC < 41bp 0.86338290332004 0.627079344005052 0.46280164 0.29889774 prediction 0.472607118629977 Functional Loss - HIST1H2AL ENSG00000198374 CDS Human other chr6:27833220 chr6:27833221 nonsynonymous SNV 0.460 0 22 hm5C_associated_SNPs_71227 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27833158-27833223
64251 chr4 1807877 1807877 1 + G A COAD 1807874 + 1807854 1807894 41 TGGCCCGGGACGTGCACAACCTCGACTACTACAAGAAGACG TGGCCCGGGACGTGCACAACCTCAACTACTACAAGAAGACG < 41bp 0.739646703704509 0.503352172825274 0.14585906 0.26830775 prediction 0.472589061758471 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807874 chr4:1807877 nonsynonymous SNV 0.943 5 24 hm5C_associated_SNPs_71230 0 0 2 DDX24 POSTAR2 ENCODE chr4:1807848-1807897
64251 chr1 224301991 224301991 1 + G A COAD 224301988 + 224301968 224302008 41 AGGCGCTCCCAGCCCCCGCGCTGGCTCCGGACCAGCTGCCT AGGCGCTCCCAGCCCCCGCGCTGACTCCGGACCAGCTGCCT < 41bp 0.736278258946251 0.493960189849885 0.34082896 0.36604974 prediction 0.472556517892502 Functional Loss - FBXO28 ENSG00000143756 CDS Human protein_coding chr1:224301988 chr1:224301991 nonsynonymous SNV 0.673 0 24 hm5C_associated_SNPs_71236 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:224301977-224302002
64251 chr3 147130327 147130327 1 + G A UCEC 147130324 + 147130304 147130344 41 GGGGAGAAGCCCTTCAAGTGCGAGTTTGAGGGCTGTGACCG GGGGAGAAGCCCTTCAAGTGCGAATTTGAGGGCTGTGACCG < 41bp 0.76365117037524 0.527387369004397 0.26244253 0.18479174 prediction 0.472527602741686 Functional Loss - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147130324 chr3:147130327 synonymous SNV . 0 24 hm5C_associated_SNPs_71243 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:147130323-147130352
64251 chr14 55004904 55004904 1 + G T LUAD 55004902 + 55004882 55004922 41 TGAAAGTGAAGTTGAGCCATCGGAAGAGAACAGCAAGGACT TGAAAGTGAAGTTGAGCCATCGTAAGAGAACAGCAAGGACT < 41bp 0.871740034156669 0.635478551011697 0.64954925 0.297155 prediction 0.472522966289944 Functional Loss - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:55004902 chr14:55004904 stopgain 0.049 1 23 hm5C_associated_SNPs_71245 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:55004889-55004921
64251 chr9 124534959 124534959 1 + G T LUAD 124534957 + 124534937 124534977 41 GTTTTTTGTCACAAGGTCCTCCGGGGTCCAGCCCTCACCTG GTTTTTTGTCACAAGGTCCTCCTGGGTCCAGCCCTCACCTG < 41bp 0.736258714283164 0.380944955208776 0.94801617 0.36289895 prediction 0.472517428566328 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124534957 chr9:124534959 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_71247 0 0 2 RBM15 POSTAR2 ENCODE chr9:124534937-124534985
64251 chr6 155153743 155153743 1 + G T UCEC 155153741 + 155153721 155153761 41 TTGGGAATGATAACATTCAACAGGAAGGAGATAGAGATTAC TTGGGAATGATAACATTCAACATGAAGGAGATAGAGATTAC < 41bp 0.73625692609355 0.422067526221232 0.17915529 0.059024394 prediction 0.4725138521871 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155153741 chr6:155153743 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_71249 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:155153693-155153761
64251 chr2 43455530 43455530 1 + A C rs143794357 43455529 + 43455509 43455549 41 TGCAGAGCTGTGGGGGCACCCAAGTCCTGGACCCTAGGACT TGCAGAGCTGTGGGGGCACCCCAGTCCTGGACCCTAGGACT < 41bp 0.750004364656849 0.513765649471865 0.22586644 0.29060528 prediction 0.472477430369967 Functional Loss - LINC01126 ENSG00000115970 intronic Human protein_coding chr2:43455529 chr2:43455530 . . 0 22 hm5C_associated_SNPs_71258 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:43455456-43455547
64251 chr16 30768826 30768826 1 + G A LUAD 30768823 + 30768803 30768843 41 GGTCTTGCTCTTGCCTTTACCCGGAGGTAGCTGGAAGGGCC GGTCTTGCTCTTGCCTTTACCCGAAGGTAGCTGGAAGGGCC < 41bp 0.75984839989727 0.523611218051168 0.9296427 0.8806067 prediction 0.472474363692204 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30768823 chr16:30768826 nonsynonymous SNV 0.557 0 24 hm5C_associated_SNPs_71259 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30768798-30768844
64251 chr16 2124276 2124276 1 + T C STAD 2124275 + 2124255 2124295 41 TGCGTCGTGGCCTTGTCCATCTGCAGCGTGGAGATGCCTGA TGCGTCGTGGCCTTGTCCATCCGCAGCGTGGAGATGCCTGA < 41bp 0.78418667743897 0.547957688701616 0.18167263 0.11575943 prediction 0.472457977474708 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2124275 chr16:2124276 nonsynonymous SNV 0.977 5 22 hm5C_associated_SNPs_71266 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2124252-2124279
64251 chr2 172841176 172841176 1 + C T rs77061901 172841174 + 172841154 172841194 41 TCAAGATTTGCCCTGTTTTTCCCGGGAAAAATTAATGCAAG TCAAGATTTGCCCTGTTTTTCCTGGGAAAAATTAATGCAAG < 41bp 0.736222629759234 0.469175017674539 0.911006 0.8303546 prediction 0.472445259518467 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172841174 chr2:172841176 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_71269 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:172841156-172841181
64251 chr5 137803578 137803578 1 + G A COAD 137803575 + 137803555 137803595 41 TCCTTCTCCTCTCCCGGCTCCTCGACCTACCCATCCCCTGT TCCTTCTCCTCTCCCGGCTCCTCAACCTACCCATCCCCTGT < 41bp 0.748085510591116 0.511864828435454 0.15104684 0.23214045 prediction 0.472441364311324 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803575 chr5:137803578 synonymous SNV . 0 24 hm5C_associated_SNPs_71270 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137803560-137803580
64251 chr4 41984210 41984210 1 + C T CESC 41984208 + 41984188 41984228 41 GTGAAGTCCCTGTGCTGGGCCTCGCTGAACCAGTTGGACTC GTGAAGTCCCTGTGCTGGGCCTTGCTGAACCAGTTGGACTC < 41bp 0.736218253462375 0.467330029868745 0.13461542 0.09863898 prediction 0.47243650692475 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984208 chr4:41984210 nonsynonymous SNV 0.843 3 23 hm5C_associated_SNPs_71271 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:41984201-41984247
64251 chr16 67578271 67578271 1 + G A HNSC 67578268 + 67578248 67578288 41 CCCAGTGCCCGCCCCCTCAGCACGGGGTGTCCAGCTCTGGA CCCAGTGCCCGCCCCCTCAGCACAGGGTGTCCAGCTCTGGA < 41bp 0.736217901225489 0.490965321850105 0.42302746 0.18735647 prediction 0.472435802450978 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578268 chr16:67578271 synonymous SNV . 0 24 hm5C_associated_SNPs_71272 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:67578267-67578303
64251 chr16 67578270 67578270 1 + C T LGG 67578268 + 67578248 67578288 41 CCCAGTGCCCGCCCCCTCAGCACGGGGTGTCCAGCTCTGGA CCCAGTGCCCGCCCCCTCAGCATGGGGTGTCCAGCTCTGGA < 41bp 0.736217901225489 0.47800469695214 0.42302746 0.43234277 prediction 0.472435802450978 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578268 chr16:67578270 nonsynonymous SNV 0.526 4 23 hm5C_associated_SNPs_71273 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:67578267-67578303
64251 chr22 38062013 38062013 1 + G A rs143202367 38062010 + 38061990 38062030 41 GCACCGGGGTGGGGCTGGGACCCGGGGAAGGTTTGAGGGCC GCACCGGGGTGGGGCTGGGACCCAGGGAAGGTTTGAGGGCC < 41bp 0.768591809418524 0.532379628175493 0.9009203 0.6757159 prediction 0.472424362486062 Functional Loss - PDXP ENSG00000100092;ENSG00000241360 UTR3 Human other chr22:38062010 chr22:38062013 . . 0 24 hm5C_associated_SNPs_71276 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:38061985-38062016
64251 chr6 127608039 127608039 1 + T C LGG 127608038 + 127608018 127608058 41 CCTTGTTGTCACCAGAAGAACTCAAGGCAGCAAGTAGAGGA CCTTGTTGTCACCAGAAGAACCCAAGGCAGCAAGTAGAGGA < 41bp 0.736210798380815 0.482828851891871 0.17869246 0.1881721 prediction 0.47242159676163 Functional Loss - RNF146 ENSG00000118518 CDS Human protein_coding chr6:127608038 chr6:127608039 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_71279 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221659 chr6:127608038-127608039
64251 chr1 84945147 84945147 1 + G T SARC 84945145 + 84945125 84945165 41 TTTCGGAGATTAAAAACAAACAGCGGCGACACTTAATGTTC TTTCGGAGATTAAAAACAAACATCGGCGACACTTAATGTTC < 41bp 0.890602385254371 0.654407832452195 0.18700936 0.088871926 prediction 0.472389105604351 Functional Loss - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84945145 chr1:84945147 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_71282 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:84945132-84945161
64251 chr12 7050100 7050100 1 + G A UCEC 7050097 + 7050077 7050117 41 GGCCTCAGGGTCTCACCTTACCCGGATCCCCTACCCAGCTG GGCCTCAGGGTCTCACCTTACCCAGATCCCCTACCCAGCTG < 41bp 0.752054000146057 0.515863240749821 0.31146654 0.082515776 prediction 0.472381518792471 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7050097 chr12:7050100 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_71285 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:7050066-7050104
64251 chr21 40762703 40762703 1 + C T COAD 40762701 + 40762681 40762721 41 CAGGACATGAAGCAGGAGCTCTCCACAGTCAACATGATGGA CAGGACATGAAGCAGGAGCTCTTCACAGTCAACATGATGGA < 41bp 0.84568102602131 0.609500945448289 0.9259857 0.16287267 prediction 0.472360161146041 Functional Loss - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40762701 chr21:40762703 nonsynonymous SNV 0.547 4 23 hm5C_associated_SNPs_71288 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:40762663-40762710
64251 chr16 84695244 84695244 1 + C T HNSC 84695242 + 84695222 84695262 41 TCGTGTACATCTCGGGGGGCCACGACTACCAAATTGGCCCC TCGTGTACATCTCGGGGGGCCATGACTACCAAATTGGCCCC < 41bp 0.811808647023732 0.575640416380375 0.28009707 0.24680468 prediction 0.472336461286714 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695242 chr16:84695244 synonymous SNV . 0 23 hm5C_associated_SNPs_71293 0 0 3 BUD13 POSTAR2 ENCODE chr16:84695239-84695287
64251 chr10 134219725 134219725 1 + C T ACC 134219723 + 134219703 134219743 41 ATAACCGAGGCTGCAAATGCCGCAAGACACGTGGCCCCGGA ATAACCGAGGCTGCAAATGCCGTAAGACACGTGGCCCCGGA < 41bp 0.787127333684161 0.550962452368921 0.66230094 0.5568083 prediction 0.47232976263048 Functional Loss - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219723 chr10:134219725 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_71294 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:134219715-134219764
64251 chr3 49212502 49212502 1 + G A CESC 49212499 + 49212479 49212519 41 CTCCCCTCTCCTGCAGGGTCCTGGACCAAATTGCCCCGCAG CTCCCCTCTCCTGCAGGGTCCTGAACCAAATTGCCCCGCAG < 41bp 0.747898191630433 0.511736206425458 0.8800224 0.3494156 prediction 0.47232397040995 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212499 chr3:49212502 stopgain 0.999 1 24 hm5C_associated_SNPs_71295 0 0 4 BUD13 POSTAR2 ENCODE chr3:49212443-49212504
64251 chr11 58891839 58891839 1 + G T UCEC 58891836 + 58891816 58891856 41 CTTTACGTTGAATGGAAACTCCAGAAAATTAGACCGTAGTG CTTTACGTTGAATGGAAACTCCATAAAATTAGACCGTAGTG < 41bp 0.73615760942824 0.365716081374246 0.15554059 0.052253783 prediction 0.47231521885648 Functional Loss - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58891836 chr11:58891839 nonsynonymous SNV 0.007 2 24 hm5C_associated_SNPs_71296 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:58891803-58891842
64251 chr1 38260241 38260241 1 + G T ACC 38260238 + 38260218 38260258 41 TACATTCACTGGGACCACGTCATGGTGCCGCACTGGGACCC TACATTCACTGGGACCACGTCATTGTGCCGCACTGGGACCC < 41bp 0.736155760435107 0.343173311793638 0.30906495 0.15028909 prediction 0.472311520870214 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38260238 chr1:38260241 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_71298 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:38260235-38260273
64251 chr2 118575133 118575133 1 + G T ACC 118575131 + 118575111 118575151 41 GCCCATGAATGTGGGCTTATCAGAAACTCAAAATGGAGGCA GCCCATGAATGTGGGCTTATCATAAACTCAAAATGGAGGCA < 41bp 0.736154456045253 0.443799391909433 0.8185494 0.14641187 prediction 0.472308912090506 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118575131 chr2:118575133 stopgain 0.024 0 23 hm5C_associated_SNPs_71299 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118575028-118575210
64251 chr9 138011625 138011625 1 + G A COAD 138011622 + 138011602 138011642 41 CACTACGCCTGGGGTGGCCACTCGGACATCGACCTCATGGT CACTACGCCTGGGGTGGCCACTCAGACATCGACCTCATGGT < 41bp 0.746886924197961 0.510733766720277 0.2614257 0.09978449 prediction 0.472306314955369 Functional Loss - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011622 chr9:138011625 synonymous SNV . 0 24 hm5C_associated_SNPs_71300 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:138011536-138011664
64251 chr17 19470503 19470503 1 + G T LUSC 19470501 + 19470481 19470521 41 TATGTGGTTGGCCTCCCCATCGGGATCGCGCTGATGTTTGC TATGTGGTTGGCCTCCCCATCGTGATCGCGCTGATGTTTGC < 41bp 0.893697696542654 0.657553561698188 0.90728915 0.39905587 prediction 0.472288269688931 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19470501 chr17:19470503 nonsynonymous SNV 0.098 4 23 hm5C_associated_SNPs_71303 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:19470471-19470513
64251 chr1 161179294 161179294 1 + G A UCEC 161179291 + 161179271 161179311 41 AGTGCTGTTTGGAGAAATCACACGTTTGTTGAACCACATCA AGTGCTGTTTGGAGAAATCACACATTTGTTGAACCACATCA < 41bp 0.740212902975565 0.504071182597803 0.21464819 0.06227854 prediction 0.472283440755523 Functional Loss - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161179291 chr1:161179294 nonsynonymous SNV 0.740 5 24 hm5C_associated_SNPs_71305 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:161179279-161179311
64251 chr22 35812650 35812650 1 + T C LIHC 35812649 + 35812629 35812669 41 AGGCTGGGATCACCACCACCCTGAACTCCCGCTGCTCCGTC AGGCTGGGATCACCACCACCCCGAACTCCCGCTGCTCCGTC < 41bp 0.790344296075894 0.554205015011096 0.24370643 0.29278165 prediction 0.472278562129596 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35812649 chr22:35812650 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_71307 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:35812632-35812670
64251 chr16 72048500 72048500 1 + T C COAD 72048499 + 72048479 72048519 41 TGTTGAGATAGGAAGTGTGACTCCAAAACCTCAGGAAGGAA TGTTGAGATAGGAAGTGTGACCCCAAAACCTCAGGAAGGAA < 41bp 0.736138239958453 0.46305535506016 0.95983714 0.27428415 prediction 0.472276479916907 Functional Loss - DHODH ENSG00000102967 CDS Human protein_coding chr16:72048499 chr16:72048500 synonymous SNV . 0 22 hm5C_associated_SNPs_71310 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:72048475-72048502
64251 chr5 640714 640714 1 + G C BLCA 640710 + 640690 640730 41 GCGGAGCTGCACCACACACACAAGGAGCTGGTGAGCCCGCC GCGGAGCTGCACCACACACACAAGCAGCTGGTGAGCCCGCC < 41bp 0.822832145018918 0.586702112183493 0.88724375 0.61662567 prediction 0.472260065670851 Functional Loss - CEP72 ENSG00000112877 CDS Human protein_coding chr5:640710 chr5:640714 nonsynonymous SNV 0.629 2 25 hm5C_associated_SNPs_71311 0 0 1 BUD13 POSTAR2 ENCODE chr5:640649-640722
64251 chr2 109303103 109303103 1 + G T rs373064183 109303100 + 109303080 109303120 41 ACATTAGCCAGGCGTGGTGGCGGGCGCTTGTAGTCCCAGCT ACATTAGCCAGGCGTGGTGGCGGTCGCTTGTAGTCCCAGCT < 41bp 0.736124766800923 0.39673198572748 0.90263724 0.4222558 prediction 0.472249533601846 Functional Loss - LIMS1 ENSG00000169756 UTR3 Human protein_coding chr2:109303100 chr2:109303103 . . 0 24 hm5C_associated_SNPs_71312 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:109303078-109303127
64251 chr10 75519806 75519806 1 + G A SKCM 75519803 + 75519783 75519823 41 AACATCGCTGGCTTCAGCCTCAGGAAGTTTCCCTAACTCTG AACATCGCTGGCTTCAGCCTCAGAAAGTTTCCCTAACTCTG < 41bp 0.738682455942587 0.502560040068085 0.93348646 0.9174656 prediction 0.472244831749004 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519803 chr10:75519806 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_71314 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr10:75519800-75519820
64251 chr6 114181672 114181672 1 + G T LUAD 114181670 + 114181650 114181690 41 GGAGGAGCCCGCGGCCGCCGCAGCCTCGTCAGCCTGCGCAG GGAGGAGCCCGCGGCCGCCGCATCCTCGTCAGCCTGCGCAG < 41bp 0.890811847288093 0.654699607503494 0.35520083 0.13225359 prediction 0.472224479569198 Functional Loss - MARCKS ENSG00000155130 CDS Human other chr6:114181670 chr6:114181672 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_71319 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:114181660-114181680
64251 chr22 41623175 41623175 1 + C T BRCA 41623173 + 41623153 41623193 41 CCCCGGCTCATCTGTGTGGCCACGGTGAAACGAGTGGTGCA CCCCGGCTCATCTGTGTGGCCATGGTGAAACGAGTGGTGCA < 41bp 0.8169020204498 0.580794006120656 0.58124954 0.51542395 prediction 0.472216028658288 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41623173 chr22:41623175 nonsynonymous SNV 0.956 4 23 hm5C_associated_SNPs_71321 0 0 2 EFTUD2 POSTAR2 ENCODE chr22:41623142-41623182
64251 chr15 91346807 91346807 1 + C T COAD 91346805 + 91346785 91346825 41 TGGAAAAGGATCTGCTTATTCACGACACAATGCCGAAAGAC TGGAAAAGGATCTGCTTATTCATGACACAATGCCGAAAGAC < 41bp 0.839437026468988 0.603332190295777 0.10909209 0.11265537 prediction 0.472209672346422 Functional Loss - BLM ENSG00000197299 CDS Human protein_coding chr15:91346805 chr15:91346807 stopgain 1.000 1 23 hm5C_associated_SNPs_71323 1 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr15:91346766-91346819
64251 chr9 131670684 131670684 1 + A T HNSC 131670680 + 131670660 131670700 41 ACCTCAACAACGAGTGGACGCTGGACAAGCTCCGGCAGCGG ACCTCAACAACGAGTGGACGCTGGTCAAGCTCCGGCAGCGG < 41bp 0.884022530327521 0.647919584763871 0.51198566 0.259903 prediction 0.472205891127301 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670680 chr9:131670684 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_71325 0 0 1 SND1 POSTAR2 ENCODE chr9:131670605-131670687
64251 chr17 1939270 1939270 1 + G A COAD 1939267 + 1939247 1939287 41 CGCCCCTGTGCCCGCAGGTTCACGGAGGCCGAAGTGATGGT CGCCCCTGTGCCCGCAGGTTCACAGAGGCCGAAGTGATGGT < 41bp 0.757205444594721 0.521106313602338 0.62018716 0.3140633 prediction 0.472198261984766 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1939267 chr17:1939270 synonymous SNV . 0 24 hm5C_associated_SNPs_71326 0 0 6 DDX24 POSTAR2 ENCODE chr17:1939263-1939338
64251 chr12 119583193 119583193 1 + G T COAD 119583190 + 119583170 119583210 41 GTCTTTTTGCTTTCAGATCACTGGGTCGGGGTCTGCTGCTG GTCTTTTTGCTTTCAGATCACTGTGTCGGGGTCTGCTGCTG < 41bp 0.736091826243378 0.334975361772769 0.69980276 0.021992147 prediction 0.472183652486757 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119583190 chr12:119583193 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_71329 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119583180-119583340
64251 chr1 155289624 155289624 1 + G C LUAD 155289623 + 155289603 155289643 41 TTTGGGGACCCCAGTGTGACCGGCAAAATTGGCACTGACAT TTTGGGGACCCCAGTGTGACCCGCAAAATTGGCACTGACAT < 41bp 0.863339406063217 0.627248308359677 0.37118047 0.087530345 prediction 0.47218219540708 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155289623 chr1:155289624 nonsynonymous SNV 0.966 4 22 hm5C_associated_SNPs_71330 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:155289588-155289639
64251 chr11 43775630 43775630 1 + G T SARC 43775628 + 43775608 43775648 41 GGAATGAAGGTTGTCCTTATCAGCAGATCAAAGGATAAACT GGAATGAAGGTTGTCCTTATCATCAGATCAAAGGATAAACT < 41bp 0.879664929781357 0.64357674981934 0.85192096 0.23403835 prediction 0.472176359924035 Functional Loss - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43775628 chr11:43775630 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_71331 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:43775605-43775630
64251 chr7 99688914 99688914 1 + G A UCEC 99688911 + 99688891 99688931 41 CCATCAAGATGCTGCACAGCCGCGTCAAGCTCATCTTGGAG CCATCAAGATGCTGCACAGCCGCATCAAGCTCATCTTGGAG < 41bp 0.756492868186191 0.520419838403467 0.062678784 0.029293925 prediction 0.472146059565447 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688911 chr7:99688914 nonsynonymous SNV 0.930 1 24 hm5C_associated_SNPs_71334 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:99688914-99688928
64251 chr19 1924671 1924671 1 + G C rs114349190 1924667 + 1924647 1924687 41 TCCTCCCAGAGCTGCTGGCGCTGAGGTCAGAGCGGGTCTGA TCCTCCCAGAGCTGCTGGCGCTGACGTCAGAGCGGGTCTGA < 41bp 0.857590881553233 0.621525138813121 0.8383336 0.65718204 prediction 0.472131485480225 Functional Loss - SCAMP4 ENSG00000227500 UTR3 Human protein_coding chr19:1924667 chr19:1924671 . . 0 25 hm5C_associated_SNPs_71337 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:1924646-1924686
64251 chr16 31087899 31087899 1 + C T SKCM 31087897 + 31087877 31087917 41 ACCACCTGTGGCAAGGACTTCTCCAATCCCATGGCTCTCAA ACCACCTGTGGCAAGGACTTCTTCAATCCCATGGCTCTCAA < 41bp 0.73606148501577 0.443770005633051 0.9634174 0.21210736 prediction 0.47212297003154 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31087897 chr16:31087899 nonsynonymous SNV 0.160 0 23 hm5C_associated_SNPs_71339 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:31087875-31087926
64251 chr2 197521713 197521713 1 + G T UCEC 197521711 + 197521691 197521731 41 AAGATCGACTGAATGCAATACAGGAAGAGCATTCTAAGGAC AAGATCGACTGAATGCAATACATGAAGAGCATTCTAAGGAC < 41bp 0.73605934211072 0.402891474001489 0.21116146 0.10247156 prediction 0.472118684221441 Functional Loss - CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197521711 chr2:197521713 nonsynonymous SNV 0.783 4 23 hm5C_associated_SNPs_71340 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:197521686-197521722
64251 chr11 118509692 118509692 1 + G A UCEC 118509689 + 118509669 118509709 41 TCAGAACGCCTGGCCCGGGACAAGAATGCCTCCTTACAGCT TCAGAACGCCTGGCCCGGGACAAAAATGCCTCCTTACAGCT < 41bp 0.749666072018253 0.513607623077944 0.43571076 0.20059666 prediction 0.472116897880618 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118509689 chr11:118509692 synonymous SNV . 0 24 hm5C_associated_SNPs_71342 0 0 1 BUD13 POSTAR2 ENCODE chr11:118509615-118509720
64251 chr12 57961391 57961391 1 + G A SKCM 57961388 + 57961368 57961408 41 GCTGTATCTGGTGGACCTGGCAGGGAGTGAGAAGGTAGGGG GCTGTATCTGGTGGACCTGGCAGAGAGTGAGAAGGTAGGGG < 41bp 0.773235711851377 0.537178059633204 0.8760711 0.4627314 prediction 0.472115304436345 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57961388 chr12:57961391 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_71343 1 0 2 DDX24 POSTAR2 ENCODE chr12:57961383-57961402
64251 chr5 8460395 8460395 1 + C T rs373050790 8460393 + 8460373 8460413 41 ACTGCCCTGTTGCTTGCAGGCTCGCCTGAGCTGAAAGGCAG ACTGCCCTGTTGCTTGCAGGCTTGCCTGAGCTGAAAGGCAG < 41bp 0.744236767543785 0.508187111620688 0.07366705 0.10851723 prediction 0.472099311846195 Functional Loss - MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8460393 chr5:8460395 . . 0 23 hm5C_associated_SNPs_71351 0 0 1 PCBP2 POSTAR2 ENCODE chr5:8460328-8460432
64251 chr19 58152147 58152147 1 + G T STAD 58152145 + 58152125 58152165 41 GGAGAAAGAGTGCCACAGTTCAGGACTTCCAAAGAAGGTTC GGAGAAAGAGTGCCACAGTTCATGACTTCCAAAGAAGGTTC < 41bp 0.873925938504706 0.637883759222527 0.35436267 0.056659907 prediction 0.472084358564358 Functional Loss - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58152145 chr19:58152147 nonsynonymous SNV 0.200 2 23 hm5C_associated_SNPs_71353 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58152133-58152163
64251 chr2 74687401 74687401 1 + G T UCEC 74687398 + 74687378 74687418 41 ACGAGGATGTGGTTCACCGCCCAGGCACACCACCCCCCCCT ACGAGGATGTGGTTCACCGCCCATGCACACCACCCCCCCCT < 41bp 0.736039294471592 0.339127653408113 0.056052446 0.022338301 prediction 0.472078588943183 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687398 chr2:74687401 nonsynonymous SNV 0.976 2 24 hm5C_associated_SNPs_71355 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:74687378-74687408
64251 chr22 46671279 46671279 1 + G A UCEC 46671276 + 46671256 46671296 41 ACAGATGAGAGATTCTGTTGCTCGAATTTACCCCTTCTGGA ACAGATGAGAGATTCTGTTGCTCAAATTTACCCCTTCTGGA < 41bp 0.736030940771158 0.497422547956453 0.05947268 0.05255115 prediction 0.472061881542316 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46671276 chr22:46671279 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_71360 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46671279-46671302
64251 chr7 155090062 155090062 1 + C T SKCM 155090060 + 155090040 155090080 41 CAGCGCGAGGCGCCGAGGCCCCCCGCGAGCCAGCGCCGCGG CAGCGCGAGGCGCCGAGGCCCCTCGCGAGCCAGCGCCGCGG < 41bp 0.772575498176779 0.536546722266916 0.13736251 0.13886654 prediction 0.472057551819726 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090060 chr7:155090062 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_71361 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:155090027-155090064
64251 chr20 57598583 57598583 1 + G T UCEC 57598580 + 57598560 57598600 41 CCCGAGCAGTCTTGGTGGACCTAGAACCTGGGACGATGGAC CCCGAGCAGTCTTGGTGGACCTATAACCTGGGACGATGGAC < 41bp 0.736026741990114 0.344028448777038 0.16939086 0.17698157 prediction 0.472053483980227 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598580 chr20:57598583 stopgain 0.999 1 24 hm5C_associated_SNPs_71363 0 0 2 BUD13 POSTAR2 ENCODE chr20:57598538-57598583
64251 chr10 73983730 73983730 1 + G T SKCM 73983728 + 73983708 73983748 41 GGTCAGTGGAAGTTCTGTCACTGGATCTGGTTTCAGTGTCT GGTCAGTGGAAGTTCTGTCACTTGATCTGGTTTCAGTGTCT < 41bp 0.875388119145556 0.639363023828366 0.4655649 0.16797927 prediction 0.47205019063438 Functional Loss - ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73983728 chr10:73983730 stopgain 1.000 1 23 hm5C_associated_SNPs_71365 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:73983712-73983746
64251 chr17 40666449 40666449 1 + G A rs148307432 40666446 + 40666426 40666466 41 CTCCTGATCATGGAGGGCCTCTCGGCCTTTCTCCACGCACT CTCCTGATCATGGAGGGCCTCTCAGCCTTTCTCCACGCACT < 41bp 0.746285303322866 0.510264655383887 0.2661367 0.15051103 prediction 0.472041295877957 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40666446 chr17:40666449 synonymous SNV . 0 24 hm5C_associated_SNPs_71371 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40666380-40666460
64251 chr6 130460836 130460836 1 + A C COAD 130460835 + 130460815 130460855 41 ATTAAACTGGGCCCTGCTCTCAAAATTTTCAATTCCATCCT ATTAAACTGGGCCCTGCTCTCCAAATTTTCAATTCCATCCT < 41bp 0.736008471909837 0.496144495120778 0.394336 0.2356207 prediction 0.472016943819674 Functional Loss - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130460835 chr6:130460836 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_71374 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:130460830-130460856
64251 chr20 44433951 44433951 1 + G T UCEC 44433949 + 44433929 44433969 41 GGCTTTTACTTTTCAGAGCCCTGGGGATGGGGGGCACCAGA GGCTTTTACTTTTCAGAGCCCTTGGGATGGGGGGCACCAGA < 41bp 0.736007970714734 0.392232262688829 0.5613887 0.13454857 prediction 0.472015941429468 Functional Loss - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44433949 chr20:44433951 synonymous SNV . 0 23 hm5C_associated_SNPs_71375 0 0 2 GRWD1 POSTAR2 ENCODE chr20:44433946-44433978
64251 chr19 33696501 33696501 1 + C T rs146896886 33696499 + 33696479 33696519 41 CAGACCTGTTCGGCGCCGCTCGCGGGCCCTCAGACCTTCAC CAGACCTGTTCGGCGCCGCTCGTGGGCCCTCAGACCTTCAC < 41bp 0.736003418053309 0.487642953397071 0.89207363 0.8966764 prediction 0.472006836106618 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696499 chr19:33696501 synonymous SNV . 0 23 hm5C_associated_SNPs_71377 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:33696472-33696520
64251 chr19 33696502 33696502 1 + G A STAD 33696499 + 33696479 33696519 41 CAGACCTGTTCGGCGCCGCTCGCGGGCCCTCAGACCTTCAC CAGACCTGTTCGGCGCCGCTCGCAGGCCCTCAGACCTTCAC < 41bp 0.736003418053309 0.494043050071074 0.89207363 0.36690983 prediction 0.472006836106618 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696499 chr19:33696502 nonsynonymous SNV 0.501 3 24 hm5C_associated_SNPs_71378 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:33696472-33696520
64251 chr1 156845919 156845919 1 + G A SKCM 156845916 + 156845896 156845936 41 ACATCGTGCTCAAGTGGGAGCTGGGGGAGGGCGCCTTTGGG ACATCGTGCTCAAGTGGGAGCTGAGGGAGGGCGCCTTTGGG < 41bp 0.736001280036253 0.486945412658769 0.87878394 0.8292365 prediction 0.472002560072505 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156845916 chr1:156845919 nonsynonymous SNV 0.966 5 24 hm5C_associated_SNPs_71382 0 0 2 DDX24 POSTAR2 ENCODE chr1:156845904-156845973
64251 chr16 50667336 50667336 1 + G A STAD 50667333 + 50667313 50667353 41 TTGTGAGGTCCCCCAAGGCCCAGGGCAAGAGTGTGGGTGTG TTGTGAGGTCCCCCAAGGCCCAGAGCAAGAGTGTGGGTGTG < 41bp 0.751346371857851 0.515347263413314 0.6401146 0.48099166 prediction 0.471998216889074 Functional Loss - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50667333 chr16:50667336 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_71383 0 0 6 EIF3H POSTAR2 ENCODE chr16:50667312-50667336
64251 chrX 56590789 56590789 1 + G T LUAD 56590786 + 56590766 56590806 41 CTTAGCAGCCTGGGCTTGAGCTCGACCAACTTCTCTGAGCT CTTAGCAGCCTGGGCTTGAGCTCTACCAACTTCTCTGAGCT < 41bp 0.917976070670958 0.681991564333285 0.26688528 0.8491166 prediction 0.471969012675346 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590786 chrX:56590789 synonymous SNV . 0 24 hm5C_associated_SNPs_71391 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chrX:56590721-56590792
64251 chr19 49377810 49377810 1 + G A rs140767023 49377807 + 49377787 49377827 41 GTGTATCGGCCAGGAGAGGACACGGAGGAGGAGGAAGATGA GTGTATCGGCCAGGAGAGGACACAGAGGAGGAGGAAGATGA < 41bp 0.756796205222384 0.520812056868651 0.68979305 0.30425662 prediction 0.471968296707466 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377807 chr19:49377810 synonymous SNV . 0 24 hm5C_associated_SNPs_71392 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:49377795-49377837
64251 chr15 91009561 91009561 1 + T C rs551596531 91009560 + 91009540 91009580 41 GTGGTGATGTTGGCAAAACACTGAGTGCCCTTCGCTCCCCT GTGGTGATGTTGGCAAAACACCGAGTGCCCTTCGCTCCCCT < 41bp 0.735979088534512 0.491636525750598 0.83155876 0.77176166 prediction 0.471958177069024 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91009560 chr15:91009561 nonsynonymous SNV 0.972 3 22 hm5C_associated_SNPs_71396 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91009560-91009576
64251 chr19 49686348 49686348 1 + C T BLCA 49686346 + 49686326 49686366 41 TGCTGGCAGATGTATCTGCTCTCGGACAAGGCCACCTCGCC TGCTGGCAGATGTATCTGCTCTTGGACAAGGCCACCTCGCC < 41bp 0.772454717782017 0.536476052574609 0.2070424 0.13534546 prediction 0.471957330414816 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49686346 chr19:49686348 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_71397 0 0 1 RPS3 POSTAR2 ENCODE chr19:49686334-49686357
64251 chr20 42089580 42089580 1 + G C LUAD 42089576 + 42089556 42089596 41 GAGCCAGTCCCGTTCCAATTCGCCGCTACCTGTTCCACCCT GAGCCAGTCCCGTTCCAATTCGCCCCTACCTGTTCCACCCT < 41bp 0.830617688432213 0.594639454484902 0.18809241 0.03742692 prediction 0.471956467894621 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089576 chr20:42089580 synonymous SNV . 0 25 hm5C_associated_SNPs_71398 0 0 34 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:42089513-42089664
64251 chr1 44386147 44386147 1 + C T CESC 44386145 + 44386125 44386165 41 AGCCCCCTGAGATTCGAATCCTCAACCCATATTTCATCCAG AGCCCCCTGAGATTCGAATCCTTAACCCATATTTCATCCAG < 41bp 0.754660311867 0.518685403158222 0.1597079 0.17620367 prediction 0.471949817417558 Functional Loss - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44386145 chr1:44386147 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_71399 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44386140-44386165
64251 chr2 31489768 31489768 1 + C T rs150263934 31489766 + 31489746 31489786 41 TTTGGGCACACCTCCAAGTTCTCGGGATTAGAAGGACAAGA TTTGGGCACACCTCCAAGTTCTTGGGATTAGAAGGACAAGA < 41bp 0.735970104155786 0.494467215731001 0.0808765 0.14064309 prediction 0.471940208311571 Functional Loss - EHD3 ENSG00000013016 UTR3 Human protein_coding chr2:31489766 chr2:31489768 . . 0 23 hm5C_associated_SNPs_71400 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:31489738-31489785
64251 chr2 158114721 158114721 1 + C T LUSC 158114719 + 158114699 158114739 41 CTCATTCAGTGAGATCAACACTCGGGTCATCAAGGAAGACA CTCATTCAGTGAGATCAACACTTGGGTCATCAAGGAAGACA < 41bp 0.735968375466729 0.474096379462772 0.052588254 0.021194309 prediction 0.471936750933458 Functional Loss - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158114719 chr2:158114721 nonsynonymous SNV 0.948 2 23 hm5C_associated_SNPs_71401 0 0 1 YBX3 POSTAR2 ENCODE chr2:158114720-158114765
64251 chr10 5948509 5948509 1 + G A UCEC 5948506 + 5948486 5948526 41 TGCCTAGTGAGGTCCTGAGGCACGTGTTTGCCTTCCTCCCG TGCCTAGTGAGGTCCTGAGGCACATGTTTGCCTTCCTCCCG < 41bp 0.735967895545401 0.491165703011538 0.4500393 0.27273345 prediction 0.471935791090802 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948506 chr10:5948509 nonsynonymous SNV 0.799 2 24 hm5C_associated_SNPs_71402 0 0 7 EFTUD2 POSTAR2 ENCODE chr10:5948445-5948509
64251 chr17 37899223 37899223 1 + G A UCEC 37899220 + 37899200 37899240 41 CAGCAGGTGCCACAGCTCGCCACGTGTGTGAAATGCTGGTG CAGCAGGTGCCACAGCTCGCCACATGTGTGAAATGCTGGTG < 41bp 0.735965325603851 0.495238269782725 0.8892564 0.9063327 prediction 0.471930651207701 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37899220 chr17:37899223 nonsynonymous SNV 0.425 3 24 hm5C_associated_SNPs_71404 0 0 4 PPIG POSTAR2 ENCODE chr17:37899159-37899228
64251 chrX 119005903 119005903 1 + C T BLCA 119005901 + 119005881 119005921 41 TTCGAGATTCTCCCCGGACTCTCCGTCATGGGCGTGTGCTT TTCGAGATTCTCCCCGGACTCTTCGTCATGGGCGTGTGCTT < 41bp 0.799225287635377 0.563260467554037 0.033379793 0.011497766 prediction 0.47192964016268 Functional Loss - NDUFA1 ENSG00000125356 CDS Human protein_coding chrX:119005901 chrX:119005903 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_71405 0 0 43 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:119005800-119005940
64251 chr7 99226926 99226926 1 + C T rs149961438 99226924 + 99226904 99226944 41 CCTCTCTCCAGGGCCCTGGGCTCGGAAGGGTCTGTGAGCAG CCTCTCTCCAGGGCCCTGGGCTTGGAAGGGTCTGTGAGCAG < 41bp 0.735951986456555 0.483527842126793 0.31329024 0.20852193 prediction 0.471903972913111 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99226924 chr7:99226926 synonymous SNV . 0 23 hm5C_associated_SNPs_71410 0 0 3 RBM15 POSTAR2 ENCODE chr7:99226898-99226937
64251 chr3 139062880 139062880 1 + C T ESCA 139062878 + 139062858 139062898 41 TTCTGATAATCATGGCGCCCCTCGGAACAACTGTATTGCTG TTCTGATAATCATGGCGCCCCTTGGAACAACTGTATTGCTG < 41bp 0.747212956171567 0.511264944230565 0.023228586 0.013481736 prediction 0.471896023882003 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062878 chr3:139062880 synonymous SNV . 0 23 hm5C_associated_SNPs_71413 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:139062860-139062880
64251 chr4 113568585 113568585 1 + G T LUSC 113568583 + 113568563 113568603 41 TAGCTTACCTGAAGTCAGAACAGGGAAGAGGAAGAGAAGCA TAGCTTACCTGAAGTCAGAACATGGAAGAGGAAGAGAAGCA < 41bp 0.735946931768461 0.422948023101375 0.83343726 0.350147 prediction 0.471893863536923 Functional Loss - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113568583 chr4:113568585 nonsynonymous SNV 0.086 2 23 hm5C_associated_SNPs_71414 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:113568580-113568616
64251 chr4 187130329 187130329 1 + C T UCEC 187130327 + 187130307 187130347 41 ATCCGAGATACTTCCCCAACCCCGAGGAGTTCCAGCCTGAG ATCCGAGATACTTCCCCAACCCTGAGGAGTTCCAGCCTGAG < 41bp 0.735944950646145 0.45134757593061 0.047554404 0.05737406 prediction 0.47188990129229 Functional Loss - CYP4V2 ENSG00000145476;ENSG00000164344 CDS Human other chr4:187130327 chr4:187130329 synonymous SNV . 0 23 hm5C_associated_SNPs_71415 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:187130324-187130362
64251 chr12 105151192 105151192 1 + G C rs148230565 105151191 + 105151171 105151211 41 ATCAAACGCCAGCGGAAGAACGCCACCCAGGAGGCCCTGCG ATCAAACGCCAGCGGAAGAACCCCACCCAGGAGGCCCTGCG < 41bp 0.735944001023479 0.423644676998 0.11300275 0.052117467 prediction 0.471888002046958 Functional Loss - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105151191 chr12:105151192 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_71417 0 0 3 METAP2 POSTAR2 ENCODE chr12:105151111-105151216
64251 chr8 11615827 11615827 1 + G A STAD 11615824 + 11615804 11615844 41 GTTCTCAGTCAGTGCGATGTCTGGCCATGGGCCCTCCATCC GTTCTCAGTCAGTGCGATGTCTGACCATGGGCCCTCCATCC < 41bp 0.754040972103131 0.518100034475602 0.046759456 0.02672702 prediction 0.471881875255057 Functional Loss - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11615824 chr8:11615827 nonsynonymous SNV 0.925 1 24 hm5C_associated_SNPs_71418 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:11615813-11615829
64251 chr4 152025340 152025340 1 + G T UCEC 152025338 + 152025318 152025358 41 CTGGTTTGCAGGATTCCAGACAGCATTGGAAAAGACATAGA CTGGTTTGCAGGATTCCAGACATCATTGGAAAAGACATAGA < 41bp 0.770731966247951 0.534792390571209 0.053956687 0.08228308 prediction 0.471879151353483 Functional Loss - RPS3A ENSG00000145425 CDS Human protein_coding chr4:152025338 chr4:152025340 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_71420 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr4:152025323-152025355
64251 chr14 37132666 37132666 1 + G A STAD 37132663 + 37132643 37132683 41 CCCCGGTTCGGTGGCCATGCCGCGCACCTGGCCCTCCTCGC CCCCGGTTCGGTGGCCATGCCGCACACCTGGCCCTCCTCGC < 41bp 0.766889711047055 0.530951848703055 0.39407265 0.08316991 prediction 0.471875724688001 Functional Loss - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132663 chr14:37132666 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_71424 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:37132638-37132672
64251 chr8 95653617 95653617 1 + G C STAD 95653613 + 95653593 95653633 41 CTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGAGAAGGAG CTGGGGCCACCGGGGCCAAGCTAGCCTCGGATGAGAAGGAG < 41bp 0.834409670361536 0.598480034396853 0.86418676 0.3973639 prediction 0.471859271929364 Functional Loss - ESRP1 ENSG00000104413 CDS Human protein_coding chr8:95653613 chr8:95653617 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_71427 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:95653613-95653644
64251 chr12 121159512 121159512 1 + C T rs188705633 121159510 + 121159490 121159530 41 GTGCTGGCCTTGGATTCAGCCCCGAGAGAGGGGAGAGACCA GTGCTGGCCTTGGATTCAGCCCTGAGAGAGGGGAGAGACCA < 41bp 0.74940939662069 0.513498107438199 0.061986 0.067867994 prediction 0.471822578364981 Functional Loss - UNC119B ENSG00000256569 ncRNA_exonic Human antisense chr12:121159510 chr12:121159512 . . 0 23 hm5C_associated_SNPs_71432 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:121159479-121159513
64251 chr12 110781105 110781105 1 + T C LUSC 110781104 + 110781084 110781124 41 TTCAGCTGCTCTGGGTCAATCTGGTGACAGATGGCCTGCCT TTCAGCTGCTCTGGGTCAATCCGGTGACAGATGGCCTGCCT < 41bp 0.771312121003527 0.535402843977545 0.6467808 0.87960804 prediction 0.471818554051964 Functional Loss - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110781104 chr12:110781105 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_71433 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:110781037-110781107
64251 chr8 126011789 126011789 1 + C T HNSC 126011787 + 126011767 126011807 41 TGCTCTCCTACCGCTGTCGCCACCGAAACGGGGGTCTCCTC TGCTCTCCTACCGCTGTCGCCATCGAAACGGGGGTCTCCTC < 41bp 0.753864106019508 0.517956275746917 0.40093577 0.90529764 prediction 0.471815660545183 Functional Loss - SQLE ENSG00000104549 CDS Human protein_coding chr8:126011787 chr8:126011789 synonymous SNV . 0 23 hm5C_associated_SNPs_71435 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:126011771-126011791
64251 chr20 330326 330326 1 + C T GBM 330324 + 330304 330344 41 ATCGTTCCTGCAGCTGCAGCCGCGGCCCCAGCGTGGAGGAT ATCGTTCCTGCAGCTGCAGCCGTGGCCCCAGCGTGGAGGAT < 41bp 0.768715360808922 0.532809001854496 0.866611 0.69287175 prediction 0.471812717908853 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:330324 chr20:330326 synonymous SNV . 0 23 hm5C_associated_SNPs_71436 0 0 1 DDX3X POSTAR2 ENCODE chr20:330297-330361
64251 chr1 11345849 11345849 1 + G A rs146002977 11345846 + 11345826 11345866 41 ATCCCCCTCGCCCTCAGCACCGAGGCCATTCTCCATTCCAA ATCCCCCTCGCCCTCAGCACCGAAGCCATTCTCCATTCCAA < 41bp 0.753781242314696 0.517876659947375 0.08006662 0.037759393 prediction 0.471809164734642 Functional Loss - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11345846 chr1:11345849 synonymous SNV . 0 24 hm5C_associated_SNPs_71438 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:11345840-11345860
64251 chr1 1421563 1421563 1 + G T STAD 1421561 + 1421541 1421581 41 AAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGG AAGAAGAACCGGGGCCTGTACATGCACATCCTGCTGTATGG < 41bp 0.735889546183363 0.369394443788649 0.9005139 0.3782769 prediction 0.471779092366726 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421561 chr1:1421563 nonsynonymous SNV 0.003 5 23 hm5C_associated_SNPs_71445 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1421560-1421580
64251 chr8 145745194 145745194 1 + G A COAD 145745191 + 145745171 145745211 41 AGGCCCTGCCCTTGCTGCCACGCGAACTCTTCCCCCTGCTG AGGCCCTGCCCTTGCTGCCACGCAAACTCTTCCCCCTGCTG < 41bp 0.782162195099814 0.546275657326126 0.55615866 0.12422931 prediction 0.471773075547376 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745191 chr8:145745194 nonsynonymous SNV 0.955 2 24 hm5C_associated_SNPs_71447 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145745159-145745198
64251 chr22 24237108 24237108 1 + G A rs201099096 24237105 + 24237085 24237125 41 CTGCTGTGCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCC CTGCTGTGCGGCCTGCTGGCCGAACGCCTGCGCATCAGCCC < 41bp 0.735963621080973 0.500088613630372 0.5380639 0.1730155 prediction 0.471750014901202 Functional Loss - MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237105 chr22:24237108 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_71453 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr16 30775599 30775599 1 + T C KIRP 30775598 + 30775578 30775618 41 GTGAGGAGGTGGAGCTGGAGCTGCAAGGCCGAATGGAGTTC GTGAGGAGGTGGAGCTGGAGCCGCAAGGCCGAATGGAGTTC < 41bp 0.782455228205937 0.546582766844104 0.38287827 0.42089164 prediction 0.471744922723668 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30775598 chr16:30775599 nonsynonymous SNV 0.964 4 22 hm5C_associated_SNPs_71454 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:30775574-30775634
64251 chr10 99216547 99216547 1 + C T COAD 99216545 + 99216525 99216565 41 CTCTTCTAGGCACTGGCTTACTCGGGTGCTCTTACCTTCTA CTCTTCTAGGCACTGGCTTACTTGGGTGCTCTTACCTTCTA < 41bp 0.814105010578539 0.578241509951845 0.18382293 0.20370269 prediction 0.471727001253388 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99216545 chr10:99216547 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_71455 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr10:99216541-99216566
64251 chr19 582960 582960 1 + G A rs118187381 582957 + 582937 582977 41 TCTGAAGTGTTTCACGAGAGCCCGGGAGCTGCTGCCCTGCG TCTGAAGTGTTTCACGAGAGCCCAGGAGCTGCTGCCCTGCG < 41bp 0.739199057897186 0.503343669030604 0.24788621 0.15090883 prediction 0.471710777733164 Functional Loss - BSG ENSG00000172270 UTR3 Human protein_coding chr19:582957 chr19:582960 . . 0 24 hm5C_associated_SNPs_71457 0 0 46 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr19:582860-582960
64251 chr1 1469599 1469599 1 + G C rs3128343 1469598 + 1469578 1469618 41 CCCCAGGATGTCTTGTGGTGCGGGTCGGCCGTTCTGCCCCC CCCCAGGATGTCTTGTGGTGCCGGTCGGCCGTTCTGCCCCC < 41bp 0.851899666101433 0.616048419506009 0.59678465 0.37479752 prediction 0.471702493190847 Functional Loss - ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469598 chr1:1469599 . . 0 22 hm5C_associated_SNPs_71458 0 0 1 UPF1 POSTAR2 ENCODE chr1:1469587-1469613
64251 chr12 70215623 70215623 1 + G T rs138554776 70215620 + 70215600 70215640 41 TTGCTCTATGGCCCACCATCCTGGATTGTCTCCCTGACACC TTGCTCTATGGCCCACCATCCTGTATTGTCTCCCTGACACC < 41bp 0.869723546819277 0.633877540730693 0.2479491 0.019626528 prediction 0.471692012177169 Functional Loss - RAB3IP ENSG00000127328 UTR3 Human protein_coding chr12:70215620 chr12:70215623 . . 0 24 hm5C_associated_SNPs_71461 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:70215605-70215631
64251 chr5 71627179 71627179 1 + G T COAD 71627177 + 71627157 71627197 41 CGAGTTGGATCTCGAGGAATCTGCAGTGGAGCTCATGAAAG CGAGTTGGATCTCGAGGAATCTTCAGTGGAGCTCATGAAAG < 41bp 0.764909595588596 0.529067002363999 0.8654863 0.89523494 prediction 0.471685186449193 Functional Loss - PTCD2 ENSG00000049883 CDS Human protein_coding chr5:71627177 chr5:71627179 nonsynonymous SNV 0.408 4 23 hm5C_associated_SNPs_71465 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:71627166-71627181
64251 chr17 73663525 73663525 1 + G C LUAD 73663524 + 73663504 73663544 41 TCAGAGCCCGAGTCTGATGGCGAGGCTGGAATCGAGGCGGT TCAGAGCCCGAGTCTGATGGCCAGGCTGGAATCGAGGCGGT < 41bp 0.869135822426854 0.633295118145179 0.8332824 0.34569198 prediction 0.471681408563349 Functional Loss - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73663524 chr17:73663525 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_71467 0 0 13 GRWD1 POSTAR2 ENCODE chr17:73663445-73663558
64251 chr7 50455154 50455154 1 + G T LUAD 50455151 + 50455131 50455171 41 CTTGGAAAGCATGGGCCTTCCGGGCACACTGTACCCAGGTA CTTGGAAAGCATGGGCCTTCCGGTCACACTGTACCCAGGTA < 41bp 0.735838525381483 0.38368609927803 0.46898937 0.16077775 prediction 0.471677050762966 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50455151 chr7:50455154 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_71469 0 0 1 PRPF8 POSTAR2 ENCODE chr7:50455101-50455234
64251 chr2 32289029 32289029 1 + G A LUAD 32289026 + 32289006 32289046 41 GCCGGGCCGGCCCCTCCGCCCGAGTCGCCGCATAAGCGGAA GCCGGGCCGGCCCCTCCGCCCGAATCGCCGCATAAGCGGAA < 41bp 0.758608821787509 0.522771022513347 0.22625485 0.054064095 prediction 0.471675598548325 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32289026 chr2:32289029 synonymous SNV . 0 24 hm5C_associated_SNPs_71470 0 0 4 BUD13 POSTAR2 ENCODE chr2:32288990-32289038
64251 chr19 39964917 39964917 1 + C T OV 39964915 + 39964895 39964935 41 TCCCTATGCTGCCCCCTCCCCACAAGGTTCCTACCAGCCCA TCCCTATGCTGCCCCCTCCCCATAAGGTTCCTACCAGCCCA < 41bp 0.824711355962871 0.588873760120234 0.0595015 0.063863605 prediction 0.471675191685273 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964915 chr19:39964917 stopgain 0.989 1 23 hm5C_associated_SNPs_71471 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39964889-39964920
64251 chr1 230820946 230820946 1 + G T COAD 230820944 + 230820924 230820964 41 ATCGCCTGTGGAGACTCACTCTGCAGATTTTGGCACGATAC ATCGCCTGTGGAGACTCACTCTTCAGATTTTGGCACGATAC < 41bp 0.889913309146543 0.654079648917146 0.4704293 0.5299159 prediction 0.471667320458793 Functional Loss - COG2 ENSG00000135775 CDS Human protein_coding chr1:230820944 chr1:230820946 synonymous SNV . 0 23 hm5C_associated_SNPs_71473 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:230820907-230820948
64251 chr19 41884317 41884317 1 + T C rs200174497 41884316 + 41884296 41884336 41 AGGCATGAGCTGGGGTCCCCCTTAAGAGAGATAGCCTTTGC AGGCATGAGCTGGGGTCCCCCCTAAGAGAGATAGCCTTTGC < 41bp 0.735824774068988 0.483520205814107 0.06498808 0.11120841 prediction 0.471649548137975 Functional Loss - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884316 chr19:41884317 synonymous SNV . 0 22 hm5C_associated_SNPs_71478 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41884298-41884321
64251 chr3 113499957 113499957 1 + G T UCEC 113499955 + 113499935 113499975 41 GAGCTGGTGAGAGTGGGCCACAGCGAATTGGTTGGAGAGAT GAGCTGGTGAGAGTGGGCCACATCGAATTGGTTGGAGAGAT < 41bp 0.735823979118581 0.39158346871146 0.41703278 0.23836008 prediction 0.471647958237162 Functional Loss - ATP6V1A ENSG00000114573 CDS Human protein_coding chr3:113499955 chr3:113499957 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_71481 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:113499924-113500041
64251 chr17 7611332 7611332 1 + T C UCEC 7611331 + 7611311 7611351 41 AGATCGGGGACCGGCTAGACCTGCTCTGCCCCCGGGCCCGG AGATCGGGGACCGGCTAGACCCGCTCTGCCCCCGGGCCCGG < 41bp 0.779701330168021 0.543878904558477 0.19317111 0.12977287 prediction 0.471644851219088 Functional Loss - EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611331 chr17:7611332 nonsynonymous SNV 0.989 5 22 hm5C_associated_SNPs_71482 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7611331-7611366
64251 chr11 65292703 65292703 1 + G A rs566948339 65292700 + 65292680 65292720 41 AGCCCCCAGAGGGCGGCCTGCCCGGGCCCTGGGCCCTGCAC AGCCCCCAGAGGGCGGCCTGCCCAGGCCCTGGGCCCTGCAC < 41bp 0.755339850809649 0.519526460877209 0.7675041 0.3186767 prediction 0.47162677986488 Functional Loss - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65292700 chr11:65292703 nonsynonymous SNV 0.596 1 24 hm5C_associated_SNPs_71489 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65292688-65292717
64251 chr1 213415178 213415178 1 + G T UCEC 213415176 + 213415156 213415196 41 AGCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTGTTAC AGCTGTTGATCATAGTAGTTCATGAGATATGTCTTTGTTAC < 41bp 0.735806031559577 0.413102482290313 0.6449249 0.22054455 prediction 0.471612063119153 Functional Loss - RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213415176 chr1:213415178 stopgain 0.184 0 23 hm5C_associated_SNPs_71491 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:213415146-213415185
64251 chr16 67196957 67196957 1 + G A UCEC 67196954 + 67196934 67196974 41 AGAAAAACCGCTCTTCGACGCGGGCCGCGACGTCCTGGAGG AGAAAAACCGCTCTTCGACGCGGACCGCGACGTCCTGGAGG < 41bp 0.735798908697632 0.485259501188104 0.9128356 0.747414 prediction 0.471597817395264 Functional Loss - FBXL8 ENSG00000135722 CDS Human protein_coding chr16:67196954 chr16:67196957 nonsynonymous SNV 0.819 4 24 hm5C_associated_SNPs_71495 0 0 1 RBM15 POSTAR2 ENCODE chr16:67196952-67196970
64251 chr8 55047821 55047821 1 + G T rs115113743 55047818 + 55047798 55047838 41 TCCGAGCAGCTCAGGGCGCCCTTGAAAGTTCTTGGATCTGC TCCGAGCAGCTCAGGGCGCCCTTTAAAGTTCTTGGATCTGC < 41bp 0.735792712699595 0.423275057020563 0.111795485 0.27519858 prediction 0.471585425399189 Functional Loss - MRPL15 ENSG00000137547 UTR5 Human protein_coding chr8:55047818 chr8:55047821 . . 0 24 hm5C_associated_SNPs_71501 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55047820-55047840
64251 chr1 116935580 116935580 1 + G A UCEC 116935577 + 116935557 116935597 41 GAAAGATACGCCAAAATCGTCGAGATACCCTTCAACTCCAC GAAAGATACGCCAAAATCGTCGAAATACCCTTCAACTCCAC < 41bp 0.742773209880126 0.506981538196073 0.101915 0.09077579 prediction 0.471583343368104 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116935577 chr1:116935580 synonymous SNV . 0 24 hm5C_associated_SNPs_71504 0 0 35 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116935486-116935605
64251 chr8 125487509 125487509 1 + C T KIRP 125487507 + 125487487 125487527 41 AAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCTC AAAGCCGGTTCTGCATCGTGCTTCAGATCTTCCTCCGGCTC < 41bp 0.799487969731831 0.563701900675282 0.24716076 0.10322592 prediction 0.471572138113099 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125487507 chr8:125487509 synonymous SNV . 0 23 hm5C_associated_SNPs_71505 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:125487488-125487520
64251 chr11 32956717 32956717 1 + A T LUAD 32956713 + 32956693 32956733 41 CTTGCTGTACGAATGCCTAACAGGACTAGACGGCCAGGGAC CTTGCTGTACGAATGCCTAACAGGTCTAGACGGCCAGGGAC < 41bp 0.861957033370936 0.626189827349252 0.90266985 0.8204312 prediction 0.471534412043369 Functional Loss - QSER1 ENSG00000060749 CDS Human protein_coding chr11:32956713 chr11:32956717 nonsynonymous SNV 0.232 2 25 hm5C_associated_SNPs_71516 0 0 19 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:32956640-32956720
64251 chr14 65207892 65207892 1 + G A SKCM 65207889 + 65207869 65207909 41 TTGATGCCCACCAGGGCCTTCTGGGGATGGACCCCCCAGGT TTGATGCCCACCAGGGCCTTCTGAGGATGGACCCCCCAGGT < 41bp 0.774250169244766 0.538483292455585 0.79214233 0.39685577 prediction 0.471533753578363 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65207889 chr14:65207892 nonsynonymous SNV 0.009 2 24 hm5C_associated_SNPs_71517 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:65207871-65207897
64251 chr22 39448671 39448671 1 + G A SKCM 39448668 + 39448648 39448688 41 TAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAG TAAAATACAACTTTCTATTCCTGAACAGCAAGCTGCAGGAG < 41bp 0.752438165485735 0.516674638467891 0.021111757 0.025300592 prediction 0.47152705403569 Functional Loss - APOBEC3F ENSG00000128394 CDS Human protein_coding chr22:39448668 chr22:39448671 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_71519 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr22:39448645-39448671
64251 chr7 98992103 98992103 1 + G T UCEC 98992100 + 98992080 98992120 41 GAGTCAGCCTTGAAGGACCTCAAGATCAAATGACCTGTGAG GAGTCAGCCTTGAAGGACCTCAATATCAAATGACCTGTGAG < 41bp 0.735757224037665 0.344305036604572 0.2845705 0.19006273 prediction 0.47151444807533 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98992100 chr7:98992103 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_71520 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:98992080-98992123
64251 chr21 48055602 48055602 1 + G T rs2277829 48055599 + 48055579 48055619 41 GCGGGTTGAGGGCGGTGGCTCAGGCTCCTGGAAAGGACCGT GCGGGTTGAGGGCGGTGGCTCAGTCTCCTGGAAAGGACCGT < 41bp 0.735753268544789 0.387282435068025 0.89175916 0.48476622 prediction 0.471506537089578 Functional Loss - PRMT2 ENSG00000160310 UTR5 Human protein_coding chr21:48055599 chr21:48055602 . . 0 24 hm5C_associated_SNPs_71521 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr21:48055600-48055620
64251 chr17 43912051 43912051 1 + G T LUSC 43912048 + 43912028 43912068 41 GGACAAGCACTCGATCCGTGCCCGAGTGGCCCGTGCCATGT GGACAAGCACTCGATCCGTGCCCTAGTGGCCCGTGCCATGT < 41bp 0.735745629015211 0.416308339628973 0.10095772 0.009219378 prediction 0.471491258030422 Functional Loss - CRHR1;LINC02210-CRHR1 ENSG00000120088 CDS Human protein_coding chr17:43912048 chr17:43912051 stopgain 0.292 4 24 hm5C_associated_SNPs_71524 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43912032-43912059
64251 chr19 54625967 54625967 1 + G A UCEC 54625964 + 54625944 54625984 41 AATGCACTGGATTACATCCGCACGGTCAAGGTGAGCGCAGA AATGCACTGGATTACATCCGCACAGTCAAGGTGAGCGCAGA < 41bp 0.750531347692926 0.514790417626935 0.3828085 0.089107156 prediction 0.471481860131981 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54625964 chr19:54625967 synonymous SNV . 0 24 hm5C_associated_SNPs_71529 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54625947-54625970
64251 chr5 145838729 145838729 1 + G A STAD 145838726 + 145838706 145838746 41 CACAAGCTCAGGCCCAGGCCCAGGCTCAGGTCCAGGCCCAG CACAAGCTCAGGCCCAGGCCCAGACTCAGGTCCAGGCCCAG < 41bp 0.735738429635831 0.487650782704161 0.45816293 0.116247594 prediction 0.471476859271663 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838726 chr5:145838729 nonsynonymous SNV 0.105 0 24 hm5C_associated_SNPs_71532 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr22 39388567 39388567 1 + A C rs186931724 39388566 + 39388546 39388586 41 CATCTCCAGCTGCTCACAGACACCAGCAAAGCAATGTGCTC CATCTCCAGCTGCTCACAGACCCCAGCAAAGCAATGTGCTC < 41bp 0.789266381043436 0.553537003669626 0.024623305 0.026881725 prediction 0.471458754747621 Functional Loss - APOBEC3B-AS1 ENSG00000249310 ncRNA_exonic Human antisense chr22:39388566 chr22:39388567 . . 0 22 hm5C_associated_SNPs_71536 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr22:39388537-39388572
64251 chr16 31050934 31050934 1 + G A STAD 31050931 + 31050911 31050951 41 ACGTGGAACGTGGGCAGGAGCACGTCAAGACGGCCCTGGAG ACGTGGAACGTGGGCAGGAGCACATCAAGACGGCCCTGGAG < 41bp 0.765757937632418 0.530030322034972 0.35155112 0.24926817 prediction 0.47145523119489 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31050931 chr16:31050934 nonsynonymous SNV 0.905 0 24 hm5C_associated_SNPs_71537 0 0 6 DDX55 POSTAR2 ENCODE chr16:31050887-31050950
64251 chr20 34145234 34145234 1 + C T UCEC 34145232 + 34145212 34145252 41 TTCGCTCATCTACCACTCAGCACGAGCCATCCAGAAGAAAA TTCGCTCATCTACCACTCAGCATGAGCCATCCAGAAGAAAA < 41bp 0.735715406662216 0.487535055603171 0.020104527 0.01420331 prediction 0.471430813324432 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34145232 chr20:34145234 stopgain 0.988 1 23 hm5C_associated_SNPs_71544 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:34145180-34145240
64251 chr12 97334248 97334248 1 + G T LUAD 97334246 + 97334226 97334266 41 AAACAGACAGTGGAAAAAATCAGGATTTCTCCAGCTTTGAT AAACAGACAGTGGAAAAAATCATGATTTCTCCAGCTTTGAT < 41bp 0.881876281830258 0.646163211731225 0.92183924 0.040920466 prediction 0.471426140198065 Functional Loss - NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97334246 chr12:97334248 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_71546 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr12:97334238-97334259
64251 chr12 132630208 132630208 1 + A C LUAD 132630207 + 132630187 132630227 41 GGCCACCCCTCCTTTCAGGTCAAGGTGGGTCATTGGGCTGG GGCCACCCCTCCTTTCAGGTCCAGGTGGGTCATTGGGCTGG < 41bp 0.79985161338007 0.564144900312162 0.8388768 0.52386224 prediction 0.471413426135816 Functional Loss - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132630207 chr12:132630208 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_71548 0 0 3 PRPF8 POSTAR2 ENCODE chr12:132630199-132630238
64251 chr9 38395964 38395964 1 + G A SKCM 38395961 + 38395941 38395981 41 GGGCACGTGGCTGAAGGTGACCGGGCTGATGTGGATCGGGC GGGCACGTGGCTGAAGGTGACCGAGCTGATGTGGATCGGGC < 41bp 0.743447722720388 0.507741113367584 0.45032668 0.26931304 prediction 0.471413218705608 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38395961 chr9:38395964 synonymous SNV . 0 24 hm5C_associated_SNPs_71549 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:38395947-38395971
64251 chr9 131038608 131038608 1 + C T STAD 131038606 + 131038586 131038626 41 GGTGCACCTGAGAGGTCGCTCTCCGACTCCCGCGCTGGACC GGTGCACCTGAGAGGTCGCTCTTCGACTCCCGCGCTGGACC < 41bp 0.762749981004334 0.527046919963704 0.47471255 0.35596192 prediction 0.471406122081259 Functional Loss - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131038606 chr9:131038608 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_71551 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:131038603-131038649
64251 chr3 141011219 141011219 1 + T C SKCM 141011218 + 141011198 141011238 41 CCAGCTCTATTTAGAGACCACTGGGAAAAGCCGGACCCTAC CCAGCTCTATTTAGAGACCACCGGGAAAAGCCGGACCCTAC < 41bp 0.747337742086702 0.511641570861594 0.81319 0.87622356 prediction 0.471392342450214 Functional Loss - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141011218 chr3:141011219 synonymous SNV . 0 22 hm5C_associated_SNPs_71553 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141011193-141011241
64251 chr17 34893834 34893834 1 + G A UCEC 34893831 + 34893811 34893851 41 TGGCACTGATGGTAGTGGCACACGGGTTGGTCTATTAAATG TGGCACTGATGGTAGTGGCACACAGGTTGGTCTATTAAATG < 41bp 0.742838483963957 0.507145663856316 0.08077338 0.01179418 prediction 0.471385640215282 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893831 chr17:34893834 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_71555 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:34893794-34893843
64251 chr19 48830831 48830831 1 + G A COAD 48830828 + 48830808 48830848 41 CTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAA CTGAATCTCTGGTACGACTGCACATGGAACAACGACACCAA < 41bp 0.74607430936076 0.510385326891824 0.25165883 0.12674299 prediction 0.471377964937872 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48830828 chr19:48830831 synonymous SNV . 0 24 hm5C_associated_SNPs_71558 0 0 7 BUD13 POSTAR2 ENCODE chr19:48830744-48830844
64251 chr19 13264125 13264125 1 + G T UCEC 13264123 + 13264103 13264143 41 CAGCTGTCGCTGGTCATGCGCAGCGCCCGGGAGCTCTACCT CAGCTGTCGCTGGTCATGCGCATCGCCCGGGAGCTCTACCT < 41bp 0.735681431641016 0.375716583944193 0.82062846 0.11605504 prediction 0.471362863282033 Functional Loss - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264123 chr19:13264125 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_71562 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:13264112-13264133
64251 chr19 18499617 18499617 1 + G A COAD 18499614 + 18499594 18499634 41 CGAGCCTGCACCGCCTGAAGCCCGACACGGTGCCAGCGCCC CGAGCCTGCACCGCCTGAAGCCCAACACGGTGCCAGCGCCC < 41bp 0.780557099118508 0.544875984918718 0.08963731 0.08232507 prediction 0.47136222839958 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499614 chr19:18499617 nonsynonymous SNV 0.009 1 24 hm5C_associated_SNPs_71563 0 0 9 FMR1 POSTAR2 ENCODE chr19:18499600-18499655
64251 chr16 31091514 31091514 1 + G A HNSC 31091511 + 31091491 31091531 41 ACGGCGTGGGGGTGGGGGCACCCGAAAGGCGACTCGGGAAG ACGGCGTGGGGGTGGGGGCACCCAAAAGGCGACTCGGGAAG < 41bp 0.776009234131844 0.540330133097261 0.4953364 0.36241567 prediction 0.471358202069166 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091511 chr16:31091514 nonsynonymous SNV 0.340 0 24 hm5C_associated_SNPs_71566 0 0 1 SLTM POSTAR2 ENCODE chr16:31091513-31091535
64251 chr1 36039163 36039163 1 - C G rs376654065 36039164 - 36039144 36039184 41 CAGCATGGGGCGGTGAGTGCCGGGCGCGAGGCGTGGCGGCG CAGCATGGGGCGGTGAGTGCCCGGCGCGAGGCGTGGCGGCG < 41bp 0.852263538747594 0.616586143687394 0.91755474 0.8274375 prediction 0.471354790120399 Functional Loss - TFAP2E ENSG00000239636 ncRNA_intronic Human antisense chr1:36039164 chr1:36039163 . . 0 22 hm5C_associated_SNPs_71568 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr1:36039151-36039181
64251 chr11 33083117 33083117 1 + G C BLCA 33083113 + 33083093 33083133 41 ACCCAGTGGCTGGAAGAAGCCTCAGAGGACCTTATGACTCA ACCCAGTGGCTGGAAGAAGCCTCACAGGACCTTATGACTCA < 41bp 0.735669239338479 0.438441852463664 0.08515161 0.08017966 prediction 0.471338478676958 Functional Loss - TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33083113 chr11:33083117 nonsynonymous SNV 0.147 0 25 hm5C_associated_SNPs_71571 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:33083108-33083124
64251 chr1 154437778 154437778 1 + G T LUAD 154437775 + 154437755 154437795 41 AGCCTGGGGTCTGACAATACCTCGAGCCACAACCGACCAGA AGCCTGGGGTCTGACAATACCTCTAGCCACAACCGACCAGA < 41bp 0.918864927059947 0.68319631906624 0.75792384 0.88410616 prediction 0.471337215987414 Functional Loss - IL6R ENSG00000160712 CDS Human protein_coding chr1:154437775 chr1:154437778 synonymous SNV . 0 24 hm5C_associated_SNPs_71572 0 0 2 IGF2BP1 POSTAR2 ENCODE chr1:154437664-154437816
64251 chr5 108133938 108133938 1 + G T LUAD 108133935 + 108133915 108133955 41 ATGAAGCAGTGTTAAAATTGCAAGACTGGGAATTACGGTTA ATGAAGCAGTGTTAAAATTGCAATACTGGGAATTACGGTTA < 41bp 0.73566707204692 0.382403877858103 0.3295653 0.36511475 prediction 0.47133414409384 Functional Loss - FER ENSG00000151422 CDS Human protein_coding chr5:108133935 chr5:108133938 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_71574 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:108133918-108133939
64251 chr17 7604841 7604841 1 + G A UCEC 7604838 + 7604818 7604858 41 ACGCATTCACTGGAGAGCTCCGGGCTTCCTTTCGCGCCTAC ACGCATTCACTGGAGAGCTCCGGACTTCCTTTCGCGCCTAC < 41bp 0.769941194547838 0.534278512573062 0.9084588 0.8713876 prediction 0.471325363949552 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7604838 chr17:7604841 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_71578 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:7604818-7604858
64251 chr19 58102135 58102135 1 + G A BLCA 58102132 + 58102112 58102152 41 TGACCACCAGAAAATACACACTGGAGCAAGGCCTTATGAGT TGACCACCAGAAAATACACACTGAAGCAAGGCCTTATGAGT < 41bp 0.73566197970609 0.496261418361823 0.25691414 0.21533987 prediction 0.471323959412181 Functional Loss - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58102132 chr19:58102135 nonsynonymous SNV 0.006 3 24 hm5C_associated_SNPs_71580 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58102124-58102145
64251 chr2 46987120 46987120 1 + T C PAAD 46987119 + 46987099 46987139 41 ATAGGACTTTCCCTTTTAGCCTGCAGTATATCTGTCGCGCG ATAGGACTTTCCCTTTTAGCCCGCAGTATATCTGTCGCGCG < 41bp 0.75165634771007 0.516001700347728 0.12818524 0.15847027 prediction 0.471309294724684 Functional Loss - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46987119 chr2:46987120 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_71581 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:46987084-46987124
64251 chr3 9948059 9948059 1 + G A rs59269999 9948056 + 9948036 9948076 41 TCCCCTGCACAGGTCTTCAACGGGGCCTCTTCCACCTCCTG TCCCCTGCACAGGTCTTCAACGGAGCCTCTTCCACCTCCTG < 41bp 0.759190646909791 0.52353788099462 0.9436899 0.9226855 prediction 0.471305531830342 Functional Loss - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9948056 chr3:9948059 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_71582 0 0 1 SF3A3 POSTAR2 ENCODE chr3:9948010-9948062
64251 chr21 45222388 45222388 1 + G A rs114461291 45222385 + 45222365 45222405 41 TGAGTGCCGAGTCCCCCATCCTGGGTGCCTGCTATCCACGC TGAGTGCCGAGTCCCCCATCCTGAGTGCCTGCTATCCACGC < 41bp 0.740364824378016 0.504716026632045 0.77841806 0.32986593 prediction 0.471297595491942 Functional Loss - RRP1 ENSG00000160214 intronic Human protein_coding chr21:45222385 chr21:45222388 . . 0 24 hm5C_associated_SNPs_71584 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:45222346-45222405
64251 chr4 83351931 83351931 1 + G T rs367651805 83351929 + 83351909 83351949 41 GGCCGCAGCCGCAGCCGGCGCCGCCCTCCGCCCTCCCCAAC GGCCGCAGCCGCAGCCGGCGCCTCCCTCCGCCCTCCCCAAC < 41bp 0.735648122109271 0.465133520019268 0.27209657 0.15216663 prediction 0.471296244218543 Functional Loss - ENOPH1 ENSG00000145293 UTR5 Human protein_coding chr4:83351929 chr4:83351931 . . 0 23 hm5C_associated_SNPs_71586 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:83351919-83351951
64251 chr4 1729938 1729938 1 + G T SARC 1729935 + 1729915 1729955 41 AGCACCCCTGCAGGGTCTGCCTGGCGAAGCCCTGGGCTGCC AGCACCCCTGCAGGGTCTGCCTGTCGAAGCCCTGGGCTGCC < 41bp 0.73564809210233 0.334651469182365 0.8009764 0.30504072 prediction 0.471296184204661 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729935 chr4:1729938 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_71587 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:1729897-1729938
64251 chr17 18003938 18003938 1 + C T LUSC 18003936 + 18003916 18003956 41 ACAGTCACGCTGACCCAGTGCTCGGAAAAGCTGGTGCAGCT ACAGTCACGCTGACCCAGTGCTTGGAAAAGCTGGTGCAGCT < 41bp 0.735639192369408 0.443688687928519 0.4341045 0.10186395 prediction 0.471278384738815 Functional Loss - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18003936 chr17:18003938 nonsynonymous SNV 0.948 2 23 hm5C_associated_SNPs_71590 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18003933-18003952
64251 chr16 28963514 28963514 1 + G A UCEC 28963511 + 28963491 28963531 41 CCTCCTGAAACTCTACCCTCCAGGGGATGAGGAAGGTAAGG CCTCCTGAAACTCTACCCTCCAGAGGATGAGGAAGGTAAGG < 41bp 0.759926524790368 0.524297294216402 0.9077499 0.87370336 prediction 0.471258461147932 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28963511 chr16:28963514 nonsynonymous SNV 0.285 0 24 hm5C_associated_SNPs_71592 0 0 10 BUD13 POSTAR2 ENCODE chr16:28963500-28963569
64251 chr4 134073055 134073055 1 + G A PRAD 134073052 + 134073032 134073072 41 AGGGCGCAACGGGACTCCAGCGCGTGAGGTGCTGCCCCGCT AGGGCGCAACGGGACTCCAGCGCATGAGGTGCTGCCCCGCT < 41bp 0.776584057222584 0.540957518929197 0.8896569 0.854293 prediction 0.471253076586774 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073052 chr4:134073055 nonsynonymous SNV 0.771 2 24 hm5C_associated_SNPs_71593 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:134073054-134073055
64251 chr21 45736343 45736343 1 + C T UCEC 45736341 + 45736321 45736361 41 GTTCAGAGGCTGGGCTTCGACACCCGTGTAACTGTGCTGGG GTTCAGAGGCTGGGCTTCGACATCCGTGTAACTGTGCTGGG < 41bp 0.735626024332165 0.491416828674614 0.28792328 0.35064495 prediction 0.471252048664331 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45736341 chr21:45736343 nonsynonymous SNV 0.634 4 23 hm5C_associated_SNPs_71594 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45736325-45736355
64251 chr3 180685945 180685945 1 + G T SARC 180685943 + 180685923 180685963 41 ATGATCGAGACAGCCGACATCAGCGTGACAGCAGGAGACGC ATGATCGAGACAGCCGACATCATCGTGACAGCAGGAGACGC < 41bp 0.735622764529039 0.394408764936935 0.8717133 0.41488904 prediction 0.471245529058078 Functional Loss - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180685943 chr3:180685945 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_71597 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:180685891-180685951
64251 chr3 43381978 43381978 1 + G A BLCA 43381975 + 43381955 43381995 41 TGCTTGGGGACATAGCGGATCGAGACGCCATTGTAGAGTAC TGCTTGGGGACATAGCGGATCGAAACGCCATTGTAGAGTAC < 41bp 0.762965199418887 0.527345100052157 0.4054299 0.036703408 prediction 0.47124019873346 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43381975 chr3:43381978 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_71600 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:43381974-43381998
64251 chrX 68049052 68049052 1 + A C rs534650507 68049051 + 68049031 68049071 41 GCTCTTCTAAGTACACTGAGCAGGGCCCGCGCTGAAGTAGA GCTCTTCTAAGTACACTGAGCCGGGCCCGCGCTGAAGTAGA < 41bp 0.774765451611835 0.539147627620917 0.43724886 0.3943924 prediction 0.471235647981836 Functional Loss - EFNB1 ENSG00000090776 UTR5 Human protein_coding chrX:68049051 chrX:68049052 . . 0 22 hm5C_associated_SNPs_71601 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chrX:68049010-68049053
64251 chr19 1273620 1273620 1 + C T rs145538399 1273618 + 1273598 1273638 41 AGCCTATGGAAGCTGCAGCCCTCGGAGGACAGAAGTGTTGT AGCCTATGGAAGCTGCAGCCCTTGGAGGACAGAAGTGTTGT < 41bp 0.766919583778464 0.53131064425078 0.21783575 0.18359742 prediction 0.471217879055369 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1273618 chr19:1273620 unknown . 0 23 hm5C_associated_SNPs_71605 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1273537-1273717
64251 chr3 11404346 11404346 1 + G A BLCA 11404343 + 11404323 11404363 41 GTGAGTCGTCCAGGACTGGCCGTGATTGCAGGAGCCCTGGC GTGAGTCGTCCAGGACTGGCCGTAATTGCAGGAGCCCTGGC < 41bp 0.736902941108243 0.501295025588798 0.26364398 0.24962336 prediction 0.471215831038891 Functional Loss - ATG7 ENSG00000197548 CDS Human protein_coding chr3:11404343 chr3:11404346 synonymous SNV . 0 24 hm5C_associated_SNPs_71606 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:11404340-11404369
64251 chr11 64977543 64977543 1 + A T OV 64977539 + 64977519 64977559 41 TCGGGCAGCATGAGTGCCTACGAGATGCGGATGGCCATTGA TCGGGCAGCATGAGTGCCTACGAGTTGCGGATGGCCATTGA < 41bp 0.88121325205765 0.645606450618144 0.48905316 0.16032079 prediction 0.471213602879012 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64977539 chr11:64977543 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_71607 0 0 6 DDX24 POSTAR2 ENCODE chr11:64977487-64977565
64251 chr5 179264366 179264366 1 + C T rs559679314 179264364 + 179264344 179264384 41 GTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGT GTCCCTCCTAACAAGTGTATCTTGATTAATAACCTGCCAGT < 41bp 0.760116320859042 0.524512264398332 0.62111664 0.24825546 prediction 0.471208112921422 Functional Loss - MRNIP;SQSTM1 ENSG00000161010;ENSG00000161011 UTR3 Human other chr5:179264364 chr5:179264366 . . 0 23 hm5C_associated_SNPs_71608 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:179264258-179264397
64251 chr19 8431098 8431098 1 + G A BLCA 8431095 + 8431075 8431115 41 TCCCATCCTAGTTTGGCCTCCTGGACCACAAGCACCTAGAC TCCCATCCTAGTTTGGCCTCCTGAACCACAAGCACCTAGAC < 41bp 0.740942270851827 0.505341470716371 0.36535114 0.30585444 prediction 0.471201600270912 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8431095 chr19:8431098 stopgain 0.074 0 24 hm5C_associated_SNPs_71609 0 0 1 BUD13 POSTAR2 ENCODE chr19:8431020-8431115
64251 chr8 146278248 146278248 1 + G A rs571241836 146278245 + 146278225 146278265 41 GCGAGAAGGCCTCAGAGAAACTCGCCCCAGAAGAAGTTCCC GCGAGAAGGCCTCAGAGAAACTCACCCCAGAAGAAGTTCCC < 41bp 0.739388803006313 0.503788502230824 0.3218249 0.21972352 prediction 0.471200601550977 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278245 chr8:146278248 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_71610 0 0 6 LIN28B POSTAR2 ENCODE chr8:146278216-146278280
64251 chr2 89036088 89036088 1 + G A rs72930711 89036085 + 89036065 89036105 41 AATCTCGGGGATCAGTGGCACAAGGGAATCCCCATCGAGGT AATCTCGGGGATCAGTGGCACAAAGGAATCCCCATCGAGGT < 41bp 0.747167607126737 0.511568349701786 0.40723562 0.08399096 prediction 0.471198514849902 Functional Loss - RPIA ENSG00000153574 CDS Human protein_coding chr2:89036085 chr2:89036088 synonymous SNV . 0 24 hm5C_associated_SNPs_71611 1 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:89036082-89036101
64251 chr16 23681485 23681485 1 + G T rs6497678 23681482 + 23681462 23681502 41 CCTCAGACCTTACCCCAGCTCAAGATAAGTCTCAGATTGCA CCTCAGACCTTACCCCAGCTCAATATAAGTCTCAGATTGCA < 41bp 0.735597744906364 0.378309264054675 0.37017733 0.11443189 prediction 0.471195489812729 Functional Loss - DCTN5 ENSG00000260482 ncRNA_exonic Human 3prime_overlapping_ncRNA chr16:23681482 chr16:23681485 . . 0 24 hm5C_associated_SNPs_71612 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:23681477-23681506
64251 chr14 24619510 24619510 1 + A C ESCA 24619509 + 24619489 24619529 41 AGGCCTAGAACCTGATCTTGCACGGGGTCGGTGGGCCTGCC AGGCCTAGAACCTGATCTTGCCCGGGGTCGGTGGGCCTGCC < 41bp 0.786580387630306 0.550983418706376 0.8998137 0.88703024 prediction 0.471193937847861 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619509 chr14:24619510 synonymous SNV . 0 22 hm5C_associated_SNPs_71615 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr14:24619509-24619510
64251 chr5 126113488 126113488 1 + G C rs189717541 126113487 + 126113467 126113507 41 GCGACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGC GCGACGCGCGCTCGACGACACCGCCCGCGAGCGCGCCAAGC < 41bp 0.735594167023533 0.428079879060533 0.029483408 0.030473173 prediction 0.471188334047067 Functional Loss - LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126113487 chr5:126113488 synonymous SNV . 0 22 hm5C_associated_SNPs_71616 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:126113480-126113500
64251 chr7 65557837 65557837 1 + C T MESO 65557835 + 65557815 65557855 41 TGGTGCCCTGGGCGGCACTGCGCGCTCCAGCGTCGACTGGC TGGTGCCCTGGGCGGCACTGCGTGCTCCAGCGTCGACTGGC < 41bp 0.757859666688255 0.522272894243494 0.34614024 0.27879852 prediction 0.471173544889521 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65557835 chr7:65557837 nonsynonymous SNV 0.138 4 23 hm5C_associated_SNPs_71620 0 0 8 DDX55 POSTAR2 ENCODE chr7:65557749-65557879
64251 chr15 41245731 41245731 1 + G A rs140168040 41245728 + 41245708 41245748 41 TCCGTCGGTCTTTCCGTGCCCACGCCGGAGACCAGCCCCGG TCCGTCGGTCTTTCCGTGCCCACACCGGAGACCAGCCCCGG < 41bp 0.741148823325074 0.505562433974151 0.091819525 0.095172465 prediction 0.471172778701847 Functional Loss - CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41245728 chr15:41245731 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_71621 0 0 1 DDX3X POSTAR2 ENCODE chr15:41245691-41245772
64251 chr3 50225261 50225261 1 + C T BRCA 50225259 + 50225239 50225279 41 CAACTTTAAGCACGTCGTCACACGAGTGCAGCTGCATGTAC CAACTTTAAGCACGTCGTCACATGAGTGCAGCTGCATGTAC < 41bp 0.735584738490704 0.476695845645427 0.34074754 0.48697913 prediction 0.471169476981409 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50225259 chr3:50225261 stopgain 0.945 1 23 hm5C_associated_SNPs_71623 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:50225253-50225290
64251 chr2 219267781 219267781 1 + C T rs2227255 219267779 + 219267759 219267799 41 TCTACGTGTTGAAGCGTCCTCACGTGGATGAGTTCCTGCAG TCTACGTGTTGAAGCGTCCTCATGTGGATGAGTTCCTGCAG < 41bp 0.79839429088988 0.562811829238692 0.46519986 0.4513346 prediction 0.471164923302377 Functional Loss - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219267779 chr2:219267781 synonymous SNV . 0 23 hm5C_associated_SNPs_71625 0 0 5 BUD13 POSTAR2 ENCODE chr2:219267729-219267805
64251 chr12 52378999 52378999 1 + G A COAD 52378996 + 52378976 52379016 41 GGAAGCCTGGAATTGCTCATCGAGACTTAAAGTCAAAGAAC GGAAGCCTGGAATTGCTCATCGAAACTTAAAGTCAAAGAAC < 41bp 0.735578655572528 0.499824937010129 0.71432185 0.3136084 prediction 0.471157311145056 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52378996 chr12:52378999 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_71627 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:52378974-52379010
64251 chr15 39876366 39876366 1 + T C HNSC 39876365 + 39876345 39876385 41 TGCGCACCATTGTGACCACGCTGCAGGACAGCATCCGCAAA TGCGCACCATTGTGACCACGCCGCAGGACAGCATCCGCAAA < 41bp 0.809997062217808 0.574429209469197 0.5601467 0.87635785 prediction 0.471135705497222 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39876365 chr15:39876366 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_71632 0 0 3 GRWD1 POSTAR2 ENCODE chr15:39876294-39876373
64251 chr9 74865665 74865665 1 + G T LUAD 74865663 + 74865643 74865683 41 TTTAATATCTTGCTCTCTGACAGGAAAGAAACAATTCACTT TTTAATATCTTGCTCTCTGACATGAAAGAAACAATTCACTT < 41bp 0.735566470085731 0.442157181410557 0.6394942 0.2619552 prediction 0.471132940171461 Functional Loss - GDA ENSG00000119125 splicing Human protein_coding chr9:74865663 chr9:74865665 . 0.975 0 23 hm5C_associated_SNPs_71634 0 0 1 U2AF2 POSTAR2 GSE61603,GSM1509288 chr9:74865560-74865680
64251 chr15 84868517 84868517 1 - C A COAD 84868519 - 84868499 84868539 41 CTGCAACCAGGTGTCGTCCACGGGCGGGGGCATGGTAACAG CTGCAACCAGGTGTCGTCCACGTGCGGGGGCATGGTAACAG < 41bp 0.735555631012973 0.384327102295495 0.8909533 0.37121978 prediction 0.471111262025947 Functional Loss - GOLGA2P7;LOC440300 ENSG00000225151 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:84868519 chr15:84868517 . . 0 23 hm5C_associated_SNPs_71637 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:84868487-84868523
64251 chr4 71648884 71648884 1 + T C HNSC 71648883 + 71648863 71648903 41 AAGAGGAAAGTTCCTACATACTGGAATCCAATCGGAAGGTT AAGAGGAAAGTTCCTACATACCGGAATCCAATCGGAAGGTT < 41bp 0.758186536260342 0.522635334110783 0.041973025 0.077470034 prediction 0.471102404299118 Functional Loss - RUFY3 ENSG00000018189 CDS Human protein_coding chr4:71648883 chr4:71648884 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_71639 0 0 2 BUD13 POSTAR2 ENCODE chr4:71648840-71648901
64251 chr16 14989420 14989420 1 + C T SARC 14989418 + 14989398 14989438 41 AGCCGGCTACAGGGAGTCCGCGCGCTCGGCCAGGCAGCCTC AGCCGGCTACAGGGAGTCCGCGTGCTCGGCCAGGCAGCCTC < 41bp 0.802004875176942 0.566453867245591 0.25612658 0.279053 prediction 0.471102015862701 Functional Loss - NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14989418 chr16:14989420 nonsynonymous SNV 0.349 1 23 hm5C_associated_SNPs_71640 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:14989409-14989443
64251 chr7 148480941 148480941 1 + G T CESC 148480939 + 148480919 148480959 41 ATACAATGCCCTGGTAATGTCTGCATTCAACAATGACGCTG ATACAATGCCCTGGTAATGTCTTCATTCAACAATGACGCTG < 41bp 0.885978179288685 0.650429118117618 0.29398626 0.11310682 prediction 0.471098122342135 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148480939 chr7:148480941 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_71641 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148480893-148480959
64251 chr4 184367481 184367481 1 + G T UCEC 184367479 + 184367459 184367499 41 CGATCTGTTTCCAGCCAAAGCAGCAGCAGCGTTTCCTCTCA CGATCTGTTTCCAGCCAAAGCATCAGCAGCGTTTCCTCTCA < 41bp 0.87285363802037 0.637308698752058 0.2626845 0.034813255 prediction 0.471089878536625 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367479 chr4:184367481 nonsynonymous SNV 0.695 0 23 hm5C_associated_SNPs_71643 0 0 1 ZNF622 POSTAR2 ENCODE chr4:184367442-184367531
64251 chr6 160828180 160828180 1 + T C LIHC 160828179 + 160828159 160828199 41 TGTTTGTGATCTTCCGCTTCCTGCAAGGTGTATTTGGAAAG TGTTTGTGATCTTCCGCTTCCCGCAAGGTGTATTTGGAAAG < 41bp 0.735537002820422 0.46307131342404 0.058605254 0.056572348 prediction 0.471074005640844 Functional Loss - SLC22A3 ENSG00000146477 CDS Human protein_coding chr6:160828179 chr6:160828180 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_71645 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:160828180-160828200
64251 chr4 17843988 17843988 1 + A C COAD 17843984 + 17843964 17844004 41 GAACAGGAGGTGTCAGACTGCTGAAGCCGACTCTGAAAGGT GAACAGGAGGTGTCAGACTGCTGACGCCGACTCTGAAAGGT < 41bp 0.735535686177624 0.328554062170964 0.11475757 0.10270715 prediction 0.471071372355248 Functional Loss - NCAPG ENSG00000109805 CDS Human protein_coding chr4:17843984 chr4:17843988 nonsynonymous SNV 0.012 0 25 hm5C_associated_SNPs_71648 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:17843920-17843994
64251 chr8 92082576 92082576 1 + G A rs201838277 92082573 + 92082553 92082593 41 AAGGTGCCTACTAGCCGGTGCAGGTTTCTTCTAGCGCGTGT AAGGTGCCTACTAGCCGGTGCAGATTTCTTCTAGCGCGTGT < 41bp 0.736231343968301 0.500701297790235 0.77633214 0.34457684 prediction 0.471060092356133 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92082573 chr8:92082576 synonymous SNV . 0 24 hm5C_associated_SNPs_71650 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:92082552-92082576
64251 chr2 36726453 36726453 1 + C T PAAD 36726451 + 36726431 36726471 41 ACTGCATTAATGGTTTCAAACGCGATCACAATGGTTGTCGG ACTGCATTAATGGTTTCAAACGTGATCACAATGGTTGTCGG < 41bp 0.847447926920422 0.611937034048173 0.3522939 0.29607198 prediction 0.471021785744497 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36726451 chr2:36726453 synonymous SNV . 0 23 hm5C_associated_SNPs_71658 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:36726440-36726460
64251 chrX 149639635 149639635 1 + A T HNSC 149639631 + 149639611 149639651 41 CGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAA CGGCCACTGCCACCTTGCAGCTGCTGCAGCAGCAGCAGCAA < 41bp 0.735510406804181 0.395584650881006 0.24614823 0.25701445 prediction 0.471020813608361 Functional Loss - MAMLD1 ENSG00000013619 CDS Human protein_coding chrX:149639631 chrX:149639635 nonsynonymous SNV 0.986 0 25 hm5C_associated_SNPs_71659 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:149639601-149639636
64251 chr1 48713044 48713044 1 + G A UCEC 48713041 + 48713021 48713061 41 TGGGGAAAGTTGCTCTGGAGCTGGTTCTGTGGGCTCTCTGG TGGGGAAAGTTGCTCTGGAGCTGATTCTGTGGGCTCTCTGG < 41bp 0.768769034746349 0.533259099069725 0.10591805 0.13201606 prediction 0.471019871353247 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48713041 chr1:48713044 stopgain 0.898 1 24 hm5C_associated_SNPs_71660 0 0 1 SND1 POSTAR2 ENCODE chr1:48713029-48713138
64251 chr1 226032928 226032928 1 + G A rs4149229 226032925 + 226032905 226032945 41 CCTGAAAAGTGGGTGAGGTTCAAGTACCCAAAGCTCATCTC CCTGAAAAGTGGGTGAGGTTCAAATACCCAAAGCTCATCTC < 41bp 0.739048609155064 0.503542632285738 0.14157602 0.08896893 prediction 0.471011953738652 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226032925 chr1:226032928 synonymous SNV . 0 24 hm5C_associated_SNPs_71664 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:226032885-226032935
64251 chr4 152024450 152024450 1 + C T rs187100259 152024448 + 152024428 152024468 41 GTCTTGCTCTGTTGCCCAGGCTCGAGTGCAGTATTGTGATC GTCTTGCTCTGTTGCCCAGGCTTGAGTGCAGTATTGTGATC < 41bp 0.739216336820811 0.50371226915461 0.10572517 0.116181254 prediction 0.471008135332402 Functional Loss - RPS3A ENSG00000145425 UTR3 Human protein_coding chr4:152024448 chr4:152024450 . . 0 23 hm5C_associated_SNPs_71665 0 0 4 AGGF1 POSTAR2 ENCODE chr4:152024414-152024453
64251 chr16 88874625 88874625 1 + C T UCEC 88874623 + 88874603 88874643 41 TACGTCAAGCTGGACAAGGCCGCGGACCTCGCCCACATCAC TACGTCAAGCTGGACAAGGCCGTGGACCTCGCCCACATCAC < 41bp 0.763410421533285 0.527908369321464 0.5380019 0.28438067 prediction 0.471004104423641 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874623 chr16:88874625 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_71666 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:88874569-88874629
64251 chrX 47074246 47074246 1 + G C SKCM 47074245 + 47074225 47074265 41 GAAAGCTGGGCCGCCACGTGCGGGCGCTGGTGCTTGAGCTG GAAAGCTGGGCCGCCACGTGCCGGCGCTGGTGCTTGAGCTG < 41bp 0.735501878341401 0.417448059855523 0.91051733 0.82389665 prediction 0.471003756682802 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47074245 chrX:47074246 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_71667 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chrX:47074190-47074250
64251 chr6 7583554 7583554 1 + G A SKCM 7583551 + 7583531 7583571 41 TCGGGGTGCAGGATCTATCGCTGGAGCATCTGCTTCTCCTA TCGGGGTGCAGGATCTATCGCTGAAGCATCTGCTTCTCCTA < 41bp 0.741602710001383 0.506105247824198 0.3628532 0.115775794 prediction 0.470994924354369 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7583551 chr6:7583554 nonsynonymous SNV 0.917 4 24 hm5C_associated_SNPs_71671 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr6:7583514-7583569
64251 chr6 44200588 44200588 1 + G C SKCM 44200584 + 44200564 44200604 41 GCTGCCAAGCCTGGTGCTGGCCCGGCTGGTGTTTGTGCCAC GCTGCCAAGCCTGGTGCTGGCCCGCCTGGTGTTTGTGCCAC < 41bp 0.843701088691783 0.608219370077679 0.046915114 0.020535558 prediction 0.470963437228207 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200584 chr6:44200588 synonymous SNV . 0 25 hm5C_associated_SNPs_71679 0 0 5 LIN28B POSTAR2 ENCODE chr6:44200540-44200610
64251 chr17 6941531 6941531 1 + G A rs150152415 6941528 + 6941508 6941548 41 CTGCCTGTCCTGTTATTTCTCTCGCCGACGATCCCTGGCCA CTGCCTGTCCTGTTATTTCTCTCACCGACGATCCCTGGCCA < 41bp 0.735479134526374 0.482687891469367 0.8031814 0.28789267 prediction 0.470958269052749 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941528 chr17:6941531 nonsynonymous SNV 0.377 2 24 hm5C_associated_SNPs_71681 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr17:6941520-6941540
64251 chr2 131976234 131976234 1 + G A GBM 131976231 + 131976211 131976251 41 ACGTGGGCGCTTCTGGAGACCACGACGACTCTGCTATGAAG ACGTGGGCGCTTCTGGAGACCACAACGACTCTGCTATGAAG < 41bp 0.735476911167145 0.497071809468063 0.044810742 0.022502631 prediction 0.470953822334291 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976231 chr2:131976234 nonsynonymous SNV 0.012 2 24 hm5C_associated_SNPs_71682 0 0 2 TRA2A POSTAR2 ENCODE chr2:131976223-131976378
64251 chr2 131976233 131976233 1 + C T LUAD 131976231 + 131976211 131976251 41 ACGTGGGCGCTTCTGGAGACCACGACGACTCTGCTATGAAG ACGTGGGCGCTTCTGGAGACCATGACGACTCTGCTATGAAG < 41bp 0.735476911167145 0.486151653960743 0.044810742 0.020053208 prediction 0.470953822334291 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976231 chr2:131976233 synonymous SNV . 0 23 hm5C_associated_SNPs_71683 0 0 2 TRA2A POSTAR2 ENCODE chr2:131976223-131976378
64251 chr3 14725819 14725819 1 + G A rs116284917 14725816 + 14725796 14725836 41 CAGCTCCTCCACCTCAATGCCAAGGAGATGGCCTTCAACTG CAGCTCCTCCACCTCAATGCCAAAGAGATGGCCTTCAACTG < 41bp 0.735473502047927 0.487681747519931 0.20431423 0.13302332 prediction 0.470947004095854 Functional Loss - C3orf20 ENSG00000131379 CDS Human protein_coding chr3:14725816 chr3:14725819 synonymous SNV . 0 24 hm5C_associated_SNPs_71686 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr3:14725817-14725848
64251 chr16 31235527 31235527 1 + G A UCEC 31235524 + 31235504 31235544 41 CTGGAGGAGCTGACCTTTGACCCGAGCTCTGCGCACCCGAG CTGGAGGAGCTGACCTTTGACCCAAGCTCTGCGCACCCGAG < 41bp 0.74125335177589 0.50578198306105 0.5278372 0.27252817 prediction 0.470942737429679 Functional Loss - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31235524 chr16:31235527 synonymous SNV . 0 24 hm5C_associated_SNPs_71687 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31235513-31235568
64251 chr8 92082574 92082574 1 + A C rs199542428 92082573 + 92082553 92082593 41 AAGGTGCCTACTAGCCGGTGCAGGTTTCTTCTAGCGCGTGT AAGGTGCCTACTAGCCGGTGCCGGTTTCTTCTAGCGCGTGT < 41bp 0.736231343968301 0.5007628215693 0.77633214 0.36531717 prediction 0.470937044798003 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92082573 chr8:92082574 synonymous SNV . 0 22 hm5C_associated_SNPs_71688 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:92082552-92082576
64251 chr8 56015486 56015486 1 + G A SKCM 56015483 + 56015463 56015503 41 CGCGGCCAGCGCTGGTGGTTCGGGCTCACGCTCTTCTTCGT CGCGGCCAGCGCTGGTGGTTCGGACTCACGCTCTTCTTCGT < 41bp 0.752336699391881 0.516871871057278 0.8916716 0.41697127 prediction 0.470929656669206 Functional Loss - XKR4 ENSG00000206579 CDS Human protein_coding chr8:56015483 chr8:56015486 synonymous SNV . 0 24 hm5C_associated_SNPs_71695 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:56015480-56015500
64251 chr12 101005838 101005838 1 + C T COAD 101005836 + 101005816 101005856 41 TGCATCAGGTTCATTCTTTGCTCGGGACAATACCGCAAACT TGCATCAGGTTCATTCTTTGCTTGGGACAATACCGCAAACT < 41bp 0.83428990981594 0.598825787148922 0.12834659 0.05236 prediction 0.470928245334036 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101005836 chr12:101005838 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_71696 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:101005811-101005856
64251 chr17 38347604 38347604 1 + G A HNSC 38347601 + 38347581 38347621 41 ACTACGTGTTCCACGGGGAGCGCGGCCGCCGGGAGACGGCC ACTACGTGTTCCACGGGGAGCGCAGCCGCCGGGAGACGGCC < 41bp 0.767362289885716 0.531900006888667 0.4765248 0.5361974 prediction 0.470924565994098 Functional Loss - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38347601 chr17:38347604 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_71697 0 0 3 EIF3H POSTAR2 ENCODE chr17:38347571-38347653
64251 chr15 29346175 29346175 1 + G C CESC 29346174 + 29346154 29346194 41 GTCCCTCACAGCCAGGAGCCCGAGAGCGAGGACATGGAGCT GTCCCTCACAGCCAGGAGCCCCAGAGCGAGGACATGGAGCT < 41bp 0.73545979101845 0.421043547269216 0.23511606 0.14835143 prediction 0.470919582036901 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346174 chr15:29346175 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_71698 0 0 2 DDX3X POSTAR2 ENCODE chr15:29346147-29346239
64251 chr5 153832978 153832978 1 + T C GBM 153832977 + 153832957 153832997 41 CCTAGGTTGATCTGTTCCAGCTGCAGGTGAACACCCTACGA CCTAGGTTGATCTGTTCCAGCCGCAGGTGAACACCCTACGA < 41bp 0.773431103848949 0.538006790247147 0.38870496 0.50549173 prediction 0.470848627203603 Functional Loss - SAP30L ENSG00000164576 CDS Human protein_coding chr5:153832977 chr5:153832978 nonsynonymous SNV 0.854 4 22 hm5C_associated_SNPs_71712 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:153832959-153832985
64251 chr7 99688940 99688940 1 + G A LAML 99688937 + 99688917 99688957 41 AAGCTCATCTTGGAGTACGTCAAGGCCTCTGAAGCGGGTAG AAGCTCATCTTGGAGTACGTCAAAGCCTCTGAAGCGGGTAG < 41bp 0.7354151003699 0.493654612013073 0.5243438 0.27274847 prediction 0.470830200739801 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688937 chr7:99688940 synonymous SNV . 0 24 hm5C_associated_SNPs_71719 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:99688916-99688943
64251 chr19 10818192 10818192 1 + G T GBM 10818189 + 10818169 10818209 41 GTTGCAGGTCAATCCGCTGGCTGGACCGGTGCATTGCAGCC GTTGCAGGTCAATCCGCTGGCTGTACCGGTGCATTGCAGCC < 41bp 0.92401753260867 0.688602481459094 0.34981805 0.10195637 prediction 0.470830102299152 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10818189 chr19:10818192 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_71720 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:10818173-10818197
64251 chr6 24403396 24403396 1 + G C LUAD 24403395 + 24403375 24403415 41 CTCCCGTTGCTGCCTGCGGCCGCCGAGCCAACCTGATTGGA CTCCCGTTGCTGCCTGCGGCCCCCGAGCCAACCTGATTGGA < 41bp 0.735405184154092 0.42894133831243 0.34938425 0.09386304 prediction 0.470810368308183 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24403395 chr6:24403396 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_71725 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378375 chr6:24403380-24403400
64251 chr16 87678058 87678058 1 + C T SKCM 87678056 + 87678036 87678076 41 GGCCGGCAGCCCGGCCGTGTCCCGCGGGGGCTTCGTGCTCG GGCCGGCAGCCCGGCCGTGTCCTGCGGGGGCTTCGTGCTCG < 41bp 0.735403885728648 0.480863006226654 0.2786039 0.2973547 prediction 0.470807771457295 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678056 chr16:87678058 nonsynonymous SNV 0.915 4 23 hm5C_associated_SNPs_71726 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:87678058-87678059
64251 chr19 10369180 10369180 1 + C T SKCM 10369178 + 10369158 10369198 41 CACTACCGCCGCTGGGGGGACTCCGTACTCCTCGTGGACTT CACTACCGCCGCTGGGGGGACTTCGTACTCCTCGTGGACTT < 41bp 0.73540284513659 0.455750632312165 0.695423 0.5463593 prediction 0.470805690273181 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10369178 chr19:10369180 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_71728 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10369156-10369186
64251 chr15 40751684 40751684 1 + G T BLCA 40751681 + 40751661 40751701 41 AGGAGTCACCTGCCCCTAAGCAGGAACTGCATCAGCCCTCT AGGAGTCACCTGCCCCTAAGCAGTAACTGCATCAGCCCTCT < 41bp 0.925171274855815 0.68977501632041 0.8376223 0.2210581 prediction 0.470792517070811 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751681 chr15:40751684 stopgain 1.000 1 24 hm5C_associated_SNPs_71730 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:40751652-40751718
64251 chr15 22947044 22947044 1 + G A HNSC 22947041 + 22947021 22947061 41 GCTGAAGAGTACGAGCGTGCCACGCGCTACAACTACACCAG GCTGAAGAGTACGAGCGTGCCACACGCTACAACTACACCAG < 41bp 0.744465341921577 0.509074338095983 0.14919761 0.09750837 prediction 0.470782007651188 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22947041 chr15:22947044 synonymous SNV . 0 24 hm5C_associated_SNPs_71733 0 0 6 BUD13 POSTAR2 ENCODE chr15:22946974-22947049
64251 chr12 123342707 123342707 1 + G C LUSC 123342706 + 123342686 123342726 41 ACGAGCAGTTCGCAGTGTTGCGGGGCGCTGCTGCCGAGGCC ACGAGCAGTTCGCAGTGTTGCCGGGCGCTGCTGCCGAGGCC < 41bp 0.875656111319783 0.640266531234821 0.91990864 0.8869102 prediction 0.470779160169924 Functional Loss - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123342706 chr12:123342707 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_71735 0 0 2 BUD13 POSTAR2 ENCODE chr12:123342603-123342735
64251 chr19 58011421 58011421 1 + G T rs12463137 58011418 + 58011398 58011438 41 AGGGTGGCCCGGGCCCTTTCCTCGGTCGTTGTCTCACCGCC AGGGTGGCCCGGGCCCTTTCCTCTGTCGTTGTCTCACCGCC < 41bp 0.856076005106377 0.620694946449918 0.89293647 0.38222516 prediction 0.470762117312919 Functional Loss - ZNF773 ENSG00000152439 UTR5 Human protein_coding chr19:58011418 chr19:58011421 . . 0 24 hm5C_associated_SNPs_71739 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:58011411-58011436
64251 chr11 5730854 5730854 1 + G A rs61735327 5730851 + 5730831 5730871 41 CCTTGGAACTGCCTAGTCCCCATGACTGTGTGCCCACCGAG CCTTGGAACTGCCTAGTCCCCATAACTGTGTGCCCACCGAG < 41bp 0.745793728063932 0.510415877177043 0.1793679 0.18732676 prediction 0.470755701773778 Functional Loss - TRIM22 ENSG00000132274 CDS Human protein_coding chr11:5730851 chr11:5730854 nonsynonymous SNV 0.022 0 24 hm5C_associated_SNPs_71740 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:5730828-5730854
64251 chr17 78092070 78092070 1 + C T rs121907943 78092068 + 78092048 78092088 41 CCTGACCAAGGGTGGGGAGGCCCGAGGGGAGCTGTTCTGGG CCTGACCAAGGGTGGGGAGGCCTGAGGGGAGCTGTTCTGGG < 41bp 0.802830804443587 0.567455470207617 0.7451361 0.80403936 prediction 0.470750668471939 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78092068 chr17:78092070 stopgain 0.021 0 23 hm5C_associated_SNPs_71742 2 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78092070-78092089
64251 chr9 137007838 137007838 1 + G A UCEC 137007835 + 137007815 137007855 41 CCAGCTCACTCGGATCCAGTCTCGGCCGTAAGTCCCTCTGA CCAGCTCACTCGGATCCAGTCTCAGCCGTAAGTCCCTCTGA < 41bp 0.781762445410027 0.546390093243312 0.15935254 0.09888378 prediction 0.470744704333429 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137007835 chr9:137007838 synonymous SNV . 0 24 hm5C_associated_SNPs_71747 0 0 8 EFTUD2 POSTAR2 ENCODE chr9:137007803-137007863
64251 chr22 32352791 32352791 1 + G A rs1049583 32352788 + 32352768 32352808 41 GAAGGCAACTGAAGATCCTTCAGGTCCCCTGGCCCTTCCTT GAAGGCAACTGAAGATCCTTCAGATCCCCTGGCCCTTCCTT < 41bp 0.776252649169087 0.54088557992189 0.8250457 0.5349341 prediction 0.470734138494395 Functional Loss - YWHAH ENSG00000128245 UTR3 Human protein_coding chr22:32352788 chr22:32352791 . . 0 24 hm5C_associated_SNPs_71750 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:32352686-32352803
64251 chr2 97020014 97020014 1 + G A COAD 97020011 + 97019991 97020031 41 AGAGTGACTGTGGAGACTTCCCCGATGGGTCCCTGGGGGAT AGAGTGACTGTGGAGACTTCCCCAATGGGTCCCTGGGGGAT < 41bp 0.735366127260029 0.493876638762928 0.06870043 0.09639129 prediction 0.470732254520059 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97020011 chr2:97020014 nonsynonymous SNV 0.068 0 24 hm5C_associated_SNPs_71751 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:97019964-97020026
64251 chr13 80095068 80095068 1 + C T SKCM 80095066 + 80095046 80095086 41 ACTTGAAACTGACTCTTCCCCTCCACCATATAGTAGTATTA ACTTGAAACTGACTCTTCCCCTTCACCATATAGTAGTATTA < 41bp 0.735351719327351 0.431139022811643 0.91254735 0.07499948 prediction 0.470703438654701 Functional Loss - NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80095066 chr13:80095068 nonsynonymous SNV 0.702 2 23 hm5C_associated_SNPs_71759 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr13:80095035-80095068
64251 chr12 56630209 56630209 1 + C T rs139155884 56630207 + 56630187 56630227 41 GCAGGCGAAAACGAAGGAATCTCGAAACACGCAACTTGGAT GCAGGCGAAAACGAAGGAATCTTGAAACACGCAACTTGGAT < 41bp 0.822280025603829 0.58692948159269 0.93186927 0.85735583 prediction 0.470701088022279 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56630207 chr12:56630209 synonymous SNV . 0 23 hm5C_associated_SNPs_71761 0 0 1 PPIG POSTAR2 ENCODE chr12:56630202-56630277
64251 chr19 1434847 1434847 1 + G A STAD 1434844 + 1434824 1434864 41 AGGGTCGGGGGGCCCCCCCGCCGGCGGCAGCGGCTTTGGAC AGGGTCGGGGGGCCCCCCCGCCGACGGCAGCGGCTTTGGAC < 41bp 0.735344387473086 0.493037409182234 0.79847795 0.42313492 prediction 0.470688774946173 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434844 chr19:1434847 nonsynonymous SNV 0.809 2 24 hm5C_associated_SNPs_71764 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1434792-1434865
64251 chr7 106840692 106840692 1 + T C rs113938562 106840691 + 106840671 106840711 41 ATTAGAAGCAAAGGCTTTGGCTGAAGAACAGAAACGTTTAA ATTAGAAGCAAAGGCTTTGGCCGAAGAACAGAAACGTTTAA < 41bp 0.763267897646856 0.527926124532678 0.15261504 0.25976688 prediction 0.470683546228356 Functional Loss - HBP1 ENSG00000105856 CDS Human protein_coding chr7:106840691 chr7:106840692 synonymous SNV . 0 22 hm5C_associated_SNPs_71765 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr7:106840611-106840694
64251 chr15 22855171 22855171 1 + G T HNSC 22855168 + 22855148 22855188 41 AGTGACCAGGGGCCCTCCAGCAGGCAGCACACCATGGTGTC AGTGACCAGGGGCCCTCCAGCAGTCAGCACACCATGGTGTC < 41bp 0.735338233167305 0.327297293051557 0.9348891 0.7067783 prediction 0.470676466334609 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22855168 chr15:22855171 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_71766 0 0 1 BUD13 POSTAR2 ENCODE chr15:22855149-22855231
64251 chr19 14574778 14574778 1 + C T GBM 14574776 + 14574756 14574796 41 CCAGGATCCGAGGCCCGGACCACGGGGTAAGGAAGGAGGGC CCAGGATCCGAGGCCCGGACCATGGGGTAAGGAAGGAGGGC < 41bp 0.746831726983558 0.511495178581847 0.90483993 0.8636091 prediction 0.47067309680342 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574776 chr19:14574778 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_71768 0 0 4 DDX6 POSTAR2 ENCODE chr19:14574745-14574780
64251 chr1 155290374 155290374 1 + C T SKCM 155290372 + 155290352 155290392 41 AGCCGTCTTTCTGGGGCTTGCGCGCAAAATCTACAAGCGGA AGCCGTCTTTCTGGGGCTTGCGTGCAAAATCTACAAGCGGA < 41bp 0.735334641483626 0.471405350319957 0.40554264 0.45612577 prediction 0.470669282967253 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155290372 chr1:155290374 nonsynonymous SNV 0.018 0 23 hm5C_associated_SNPs_71769 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155290326-155290378
64251 chr7 99217518 99217518 1 + G A UCEC 99217515 + 99217495 99217535 41 AGTTCCTCACTATCCTGCCCCGCGAGTTCTACGCCTGGATC AGTTCCTCACTATCCTGCCCCGCAAGTTCTACGCCTGGATC < 41bp 0.752051417039543 0.516717406663666 0.55686045 0.2951795 prediction 0.470668020751755 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99217515 chr7:99217518 nonsynonymous SNV 0.544 4 24 hm5C_associated_SNPs_71770 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr7:99217494-99217518
64251 chr5 10261748 10261748 1 + G A rs143444882 10261745 + 10261725 10261765 41 AGCCGAGAAGCTGGGCTTTGCTGGTCTTGTACAGGAGATCT AGCCGAGAAGCTGGGCTTTGCTGATCTTGTACAGGAGATCT < 41bp 0.748944072197161 0.513615016102029 0.7091054 0.54638445 prediction 0.470658112190264 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10261745 chr5:10261748 nonsynonymous SNV 0.730 3 24 hm5C_associated_SNPs_71774 1 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:10261675-10261758
64251 chr8 22476454 22476454 1 + T C STAD 22476453 + 22476433 22476473 41 TGATTAACGTGGGGAGCCTGCTGCAGCGCGCGGAGCAGCAG TGATTAACGTGGGGAGCCTGCCGCAGCGCGCGGAGCAGCAG < 41bp 0.805382510818186 0.570063731024444 0.30703878 0.29753166 prediction 0.470637559587485 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22476453 chr8:22476454 nonsynonymous SNV 0.918 4 22 hm5C_associated_SNPs_71781 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr8:22476434-22476458
64251 chr11 866626 866626 1 + C T LGG 866624 + 866604 866644 41 GTCAAGGCAGACACCTACTGCGCGTAGGCCGCCCACCGCCC GTCAAGGCAGACACCTACTGCGTGTAGGCCGCCCACCGCCC < 41bp 0.749654447523606 0.514341820375064 0.3999319 0.26453894 prediction 0.470625254297085 Functional Loss - TSPAN4 ENSG00000214063 CDS Human protein_coding chr11:866624 chr11:866626 nonsynonymous SNV 0.084 1 23 hm5C_associated_SNPs_71783 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:866615-866653
64251 chr8 75263683 75263683 1 + G T GBM 75263680 + 75263660 75263700 41 CCACTCAGATCATTGATTATCTTGAACAGACTTTCCTGGAT CCACTCAGATCATTGATTATCTTTAACAGACTTTCCTGGAT < 41bp 0.735312376714517 0.361194814741423 0.24855256 0.23085868 prediction 0.470624753429034 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75263680 chr8:75263683 stopgain 1.000 1 24 hm5C_associated_SNPs_71784 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:75263680-75263700
64251 chr2 33246016 33246016 1 + C T HNSC 33246014 + 33245994 33246034 41 GTCAGAATGGAGGGATGTGTCTCCGGCCACAACTCTGTGTG GTCAGAATGGAGGGATGTGTCTTCGGCCACAACTCTGTGTG < 41bp 0.735308982201905 0.459704457020564 0.26466554 0.20098153 prediction 0.470617964403809 Functional Loss - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33246014 chr2:33246016 synonymous SNV . 0 23 hm5C_associated_SNPs_71786 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:33245980-33246018
64251 chr19 47858389 47858389 1 + G A SKCM 47858386 + 47858366 47858406 41 TGCTCCTGCGACAAATCCAGCGGGAACCCAGCCTGCCCCAG TGCTCCTGCGACAAATCCAGCGGAAACCCAGCCTGCCCCAG < 41bp 0.779905092943885 0.544600414308974 0.90247977 0.7946873 prediction 0.470609357269822 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858386 chr19:47858389 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_71788 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:47858375-47858400
64251 chr5 61923060 61923060 1 + T C LUSC 61923059 + 61923039 61923079 41 TCAAGGCACAGCAGGAGATGCTAGGAGAACAAGGTTTCCAG TCAAGGCACAGCAGGAGATGCCAGGAGAACAAGGTTTCCAG < 41bp 0.735303744244012 0.497448610086764 0.8146994 0.8963202 prediction 0.470607488488025 Functional Loss - IPO11 ENSG00000086200 CDS Human protein_coding chr5:61923059 chr5:61923060 nonsynonymous SNV 0.803 3 22 hm5C_associated_SNPs_71789 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:61923037-61923065
64251 chr15 89021203 89021203 1 + A C UCEC 89021199 + 89021179 89021219 41 GCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGA GCTGCCGCCCCAGGAAGGCTCGGACGCTGTGATGGGAAGGA < 41bp 0.925703994108692 0.690401272849933 0.6042984 0.33148372 prediction 0.470605442517517 Functional Loss - MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89021199 chr15:89021203 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_71791 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:89021202-89021226
64251 chr16 56904597 56904597 1 + G A COAD 56904594 + 56904574 56904614 41 ATCCGCATCATTGCCGTGGTCTCGGTCACTGTGCTGCTGGC ATCCGCATCATTGCCGTGGTCTCAGTCACTGTGCTGCTGGC < 41bp 0.772921202633247 0.537621853638815 0.2220357 0.16803578 prediction 0.470598697988863 Functional Loss - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56904594 chr16:56904597 synonymous SNV . 0 24 hm5C_associated_SNPs_71792 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr16:56904576-56904597
64251 chr21 37444226 37444226 1 + G T SARC 37444223 + 37444203 37444243 41 TAATCTGCCGCTGCTTAACTCTGGGCCCATTTTAACTCCCC TAATCTGCCGCTGCTTAACTCTGTGCCCATTTTAACTCCCC < 41bp 0.735296864964378 0.347297759570898 0.8450767 0.15520123 prediction 0.470593729928755 Functional Loss - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37444223 chr21:37444226 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_71794 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:37444204-37444228
64251 chr16 85645058 85645058 1 + G C rs565657609 85645054 + 85645034 85645074 41 ATAGCGTCCGGCCAAGGCCGCAAGGGGGGCGCCGCCGGTGA ATAGCGTCCGGCCAAGGCCGCAAGCGGGGCGCCGCCGGTGA < 41bp 0.821389701562444 0.586095530382672 0.87438303 0.49270824 prediction 0.470588342359545 Functional Loss - GSE1 ENSG00000131149 UTR5 Human protein_coding chr16:85645054 chr16:85645058 . . 0 25 hm5C_associated_SNPs_71795 0 0 22 AARS POSTAR2 ENCODE chr16:85645032-85645080
64251 chr19 49518862 49518862 1 + G A UCEC 49518859 + 49518839 49518879 41 TGCAGGTGGATGACATCAAGCGGGTCTACTCACTCTTCCTG TGCAGGTGGATGACATCAAGCGGATCTACTCACTCTTCCTG < 41bp 0.735292011512253 0.492080173917025 0.8656579 0.6240494 prediction 0.470584023024507 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49518859 chr19:49518862 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_71798 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:49518850-49518872
64251 chr20 3785506 3785506 1 + C T UCEC 3785504 + 3785484 3785524 41 AGGACTACCGGCCCATGAACCACGAGGCCTTCAAGGATGAG AGGACTACCGGCCCATGAACCATGAGGCCTTCAAGGATGAG < 41bp 0.799180308432348 0.563890534314574 0.4050358 0.28757092 prediction 0.470579548235548 Functional Loss - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3785504 chr20:3785506 synonymous SNV . 0 23 hm5C_associated_SNPs_71800 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:3785477-3785517
64251 chrX 129546493 129546493 1 + C T LUAD 129546491 + 129546471 129546511 41 CAGCAAGAACTCAGAGAGAGCTCAGAAGTCAGAGCCCAGGG CAGCAAGAACTCAGAGAGAGCTTAGAAGTCAGAGCCCAGGG < 41bp 0.79686532328343 0.561590093580229 0.028971732 0.0126538575 prediction 0.470550459406403 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546491 chrX:129546493 stopgain 0.079 0 23 hm5C_associated_SNPs_71804 0 0 3 TRA2A POSTAR2 ENCODE chrX:129546400-129546529
64251 chr11 720103 720103 1 + G A UCEC 720100 + 720080 720120 41 ATGGACAAGAGCGAAGCCATCACGTCTGTGGACGACGCCAT ATGGACAAGAGCGAAGCCATCACATCTGTGGACGACGCCAT < 41bp 0.736248994840319 0.500979732581918 0.12379673 0.0730941 prediction 0.470538524516802 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:720100 chr11:720103 synonymous SNV . 0 24 hm5C_associated_SNPs_71806 0 0 1 GRWD1 POSTAR2 ENCODE chr11:720103-720120
64251 chr17 38325656 38325656 1 + G A UCEC 38325653 + 38325633 38325673 41 GCAGCCAAAGCCCTCCCCACCCCGGAGGACTCCCCAGCCAG GCAGCCAAAGCCCTCCCCACCCCAGAGGACTCCCCAGCCAG < 41bp 0.73525441163144 0.4868180997412 0.50782377 0.17633659 prediction 0.470508823262881 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38325653 chr17:38325656 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_71810 0 0 1 ZRANB2 POSTAR2 ENCODE chr17:38325607-38325679
64251 chr2 172952885 172952885 1 + G A BLCA 172952882 + 172952862 172952902 41 CTGGAACCCTAACTCTTCATCCGGGAAGGGCTCAGGAGGAA CTGGAACCCTAACTCTTCATCCGAGAAGGGCTCAGGAGGAA < 41bp 0.74505861600509 0.509808747971488 0.9094237 0.8543211 prediction 0.470499736067204 Functional Loss - DLX1 ENSG00000144355 CDS Human protein_coding chr2:172952882 chr2:172952885 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_71814 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:172952853-172952888
64251 chr5 135385184 135385184 1 + G A CESC 135385181 + 135385161 135385201 41 CTTGAAGGTAACGGCCAGTACACGCTTTTGGCCCCGACCAA CTTGAAGGTAACGGCCAGTACACACTTTTGGCCCCGACCAA < 41bp 0.78290952317719 0.547665632466602 0.13550329 0.051223457 prediction 0.470487781421176 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135385181 chr5:135385184 synonymous SNV . 0 24 hm5C_associated_SNPs_71817 0 0 2 SND1 POSTAR2 ENCODE chr5:135385182-135385204
64251 chr9 104170330 104170330 1 + G T LUSC 104170327 + 104170307 104170347 41 GAATCAAAAGTGAAATTGACCAGGATCCTATGGGTAGAGAA GAATCAAAAGTGAAATTGACCAGTATCCTATGGGTAGAGAA < 41bp 0.735243265891464 0.370313413750487 0.33844084 0.046942264 prediction 0.470486531782927 Functional Loss - ZNF189 ENSG00000136870 CDS Human protein_coding chr9:104170327 chr9:104170330 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_71818 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:104170317-104170374
64251 chr12 58335598 58335598 1 + G A STAD 58335595 + 58335575 58335615 41 CGTCTGGCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCCAG CGTCTGGCCCAGGGGAATCCCCAACAAGGGTTCTTCTCCAG < 41bp 0.735238057266738 0.493408780377525 0.0827339 0.08117744 prediction 0.470476114533476 Functional Loss - ATP23 ENSG00000166896 CDS Human protein_coding chr12:58335595 chr12:58335598 synonymous SNV . 0 24 hm5C_associated_SNPs_71821 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:58335597-58335598
64251 chr4 3445868 3445868 1 + C T SKCM 3445866 + 3445846 3445886 41 TGCAGCTGCCCCCGGGCCTTCACCGGCAAGGACTGCGGCAC TGCAGCTGCCCCCGGGCCTTCATCGGCAAGGACTGCGGCAC < 41bp 0.735234995714636 0.488293684098124 0.4035923 0.4214717 prediction 0.470469991429271 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3445866 chr4:3445868 nonsynonymous SNV 0.815 4 23 hm5C_associated_SNPs_71826 0 0 1 PPIG POSTAR2 ENCODE chr4:3445865-3445877
64251 chr11 12231140 12231140 1 + T C STAD 12231139 + 12231119 12231159 41 CCGATGGCCGCAGGAACACCCTGGAAGGTGAAGACTCTTCT CCGATGGCCGCAGGAACACCCCGGAAGGTGAAGACTCTTCT < 41bp 0.782821909511921 0.547589683155577 0.51169574 0.52969104 prediction 0.470464452712688 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12231139 chr11:12231140 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_71827 0 0 3 FMR1 POSTAR2 ENCODE chr11:12231048-12231146
64251 chr19 36258849 36258849 1 + C T UCEC 36258847 + 36258827 36258867 41 GGCAACCACAGTCAAGGCCTCGCCGCCAGCCTTCCAGGTGG GGCAACCACAGTCAAGGCCTCGTCGCCAGCCTTCCAGGTGG < 41bp 0.749524961553894 0.514304318155537 0.23593092 0.12840807 prediction 0.470441286796714 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36258847 chr19:36258849 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_71833 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36258836-36258858
64251 chr11 61507974 61507974 1 + G A LAML 61507971 + 61507951 61507991 41 GAGCCCACATACTTTGCCATCTGGGGCGACAACAAGGCCTT GAGCCCACATACTTTGCCATCTGAGGCGACAACAAGGCCTT < 41bp 0.755358786902919 0.520141083052856 0.9095508 0.8160714 prediction 0.470435407700126 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507971 chr11:61507974 stopgain 1.000 1 24 hm5C_associated_SNPs_71834 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61507958-61507991
64251 chr6 35392157 35392157 1 + G A UCEC 35392154 + 35392134 35392174 41 TGTGGCAGGCAGAGAAGGGGCTGGTGTGGAAGCAGTTGGTG TGTGGCAGGCAGAGAAGGGGCTGATGTGGAAGCAGTTGGTG < 41bp 0.744204393481408 0.508989097419976 0.6970032 0.66932386 prediction 0.470430592122865 Functional Loss - PPARD ENSG00000112033 CDS Human protein_coding chr6:35392154 chr6:35392157 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_71839 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:35392147-35392168
64251 chr1 226027005 226027005 1 + G T LUAD 226027003 + 226026983 226027023 41 TTCTACATTCAAGGAGGGGACTGGGGGTCCCTGATCTGCAC TTCTACATTCAAGGAGGGGACTTGGGGTCCCTGATCTGCAC < 41bp 0.901897934128598 0.666684310577762 0.9042113 0.8546362 prediction 0.470427247101672 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226027003 chr1:226027005 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_71840 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:226026964-226027006
64251 chr1 236645820 236645820 1 + G T LUAD 236645818 + 236645798 236645838 41 AGTTCTTGCTCCGGAACAGTCAGAGGACGGTGGGCCAGCTG AGTTCTTGCTCCGGAACAGTCATAGGACGGTGGGCCAGCTG < 41bp 0.901129633024426 0.665918364589435 0.92212635 0.6893511 prediction 0.470422536869982 Functional Loss - EDARADD ENSG00000186197 CDS Human protein_coding chr1:236645818 chr1:236645820 nonsynonymous SNV 0.829 0 23 hm5C_associated_SNPs_71841 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:236645820-236645849
64251 chr12 6948168 6948168 1 + G A SKCM 6948165 + 6948145 6948185 41 CCTGCCCTCATCCCTCCAGGCTCGGGTGCGTCCTCGCTGTG CCTGCCCTCATCCCTCCAGGCTCAGGTGCGTCCTCGCTGTG < 41bp 0.761054332304091 0.525843648402684 0.7783605 0.43469062 prediction 0.470421367802814 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6948165 chr12:6948168 nonsynonymous SNV 0.913 0 24 hm5C_associated_SNPs_71843 0 0 2 NOL12 POSTAR2 ENCODE chr12:6948156-6948307
64251 chr20 57766527 57766527 1 + C T COAD 57766525 + 57766505 57766545 41 ACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGT ACCTGTGTCCGCACTGTGGTCGTGACTGCCTGAAGCCCAGT < 41bp 0.766543839247614 0.531342263646852 0.8350868 0.5993366 prediction 0.470403151201525 Functional Loss - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57766525 chr20:57766527 synonymous SNV . 0 23 hm5C_associated_SNPs_71847 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:57766509-57766544
64251 chr1 1246414 1246414 1 + C T rs566981480 1246412 + 1246392 1246432 41 AGACACGTGTAGCCCCAGCCCACGGCTTATTCCTCAAGTCA AGACACGTGTAGCCCCAGCCCATGGCTTATTCCTCAAGTCA < 41bp 0.754928464032057 0.519730245428673 0.1459074 0.10753077 prediction 0.470396437206769 Functional Loss - PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1246412 chr1:1246414 synonymous SNV . 0 23 hm5C_associated_SNPs_71853 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:1246400-1246429
64251 chr19 7533816 7533816 1 + G A STAD 7533813 + 7533793 7533833 41 GGCCAGAGTACGCAGAGCGCCCCGAGGTGGCTCGCCGGGAC GGCCAGAGTACGCAGAGCGCCCCAAGGTGGCTCGCCGGGAC < 41bp 0.759310601462962 0.52411350435821 0.27956372 0.28624928 prediction 0.470394194209504 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7533813 chr19:7533816 nonsynonymous SNV 0.704 3 24 hm5C_associated_SNPs_71854 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7533816-7533848
64251 chr11 122775027 122775027 1 + C T LUAD 122775025 + 122775005 122775045 41 CCTGCCGGGATCACGTGGCCCTCGGCGAAGGAAATCCAAAC CCTGCCGGGATCACGTGGCCCTTGGCGAAGGAAATCCAAAC < 41bp 0.735191804534197 0.454238304657563 0.29432452 0.17287698 prediction 0.470383609068393 Functional Loss - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122775025 chr11:122775027 nonsynonymous SNV 0.853 3 23 hm5C_associated_SNPs_71855 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:122774999-122775028
64251 chr11 122775028 122775028 1 + G A UCEC 122775025 + 122775005 122775045 41 CCTGCCGGGATCACGTGGCCCTCGGCGAAGGAAATCCAAAC CCTGCCGGGATCACGTGGCCCTCAGCGAAGGAAATCCAAAC < 41bp 0.735191804534197 0.499468570463801 0.29432452 0.16466925 prediction 0.470383609068393 Functional Loss - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122775025 chr11:122775028 nonsynonymous SNV 0.829 1 24 hm5C_associated_SNPs_71856 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:122774999-122775028
64251 chr5 121356362 121356362 1 + A C COAD 121356358 + 121356338 121356378 41 CAGTTAAGGAACAAAAACCACTAGAAAAAGTGTTTCTTAAA CAGTTAAGGAACAAAAACCACTAGCAAAAGTGTTTCTTAAA < 41bp 0.735187780378436 0.327555768200742 0.8055179 0.07943976 prediction 0.470375560756872 Functional Loss - SRFBP1 ENSG00000151304 CDS Human protein_coding chr5:121356358 chr5:121356362 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_71857 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr5:121356348-121356379
64251 chr2 233708862 233708862 1 + C T BRCA 233708860 + 233708840 233708880 41 GTCAGCAAACCTTCAGGTACCACGAAATCTCTTCTGGAGAT GTCAGCAAACCTTCAGGTACCATGAAATCTCTTCTGGAGAT < 41bp 0.735182955006648 0.455292854470394 0.10280648 0.16122743 prediction 0.470365910013296 Functional Loss - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233708860 chr2:233708862 nonsynonymous SNV 0.977 2 23 hm5C_associated_SNPs_71861 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:233708860-233708880
64251 chr15 90119447 90119447 1 + G A OV 90119444 + 90119424 90119464 41 GCCCGAAAAATCACCTTCTACTGGGTGGATACCACCGAATG GCCCGAAAAATCACCTTCTACTGAGTGGATACCACCGAATG < 41bp 0.735177634741501 0.495316533966078 0.85511357 0.34175402 prediction 0.470355269483002 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90119444 chr15:90119447 stopgain 1.000 1 24 hm5C_associated_SNPs_71863 0 0 10 BUD13 POSTAR2 ENCODE chr15:90119392-90119478
64251 chr12 110353227 110353227 1 + A C BLCA 110353226 + 110353206 110353246 41 AGGTTGCAGAGCGCCGGCTGCAGGCATGGGAAGCAGACCAG AGGTTGCAGAGCGCCGGCTGCCGGCATGGGAAGCAGACCAG < 41bp 0.735170661699404 0.473707672915397 0.82704926 0.8074077 prediction 0.470341323398807 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110353226 chr12:110353227 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_71865 0 0 3 BUD13 POSTAR2 ENCODE chr12:110353208-110353327
64251 chr1 16101338 16101338 1 + G A LUSC 16101335 + 16101315 16101355 41 GGTGGGGTGCAGGGACAGGGCGAGACCCAAGCAGGGTGAAG GGTGGGGTGCAGGGACAGGGCGAAACCCAAGCAGGGTGAAG < 41bp 0.761805739184595 0.526648230108237 0.45746025 0.3354395 prediction 0.470315018152716 Functional Loss - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16101335 chr1:16101338 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_71872 0 0 2 PRPF8 POSTAR2 ENCODE chr1:16101257-16101358
64251 chr15 89728662 89728662 1 + G A UCEC 89728659 + 89728639 89728679 41 GCTGTGGTTCTTCCAGGGCCCAGGAAACCTTCATGCAATGG GCTGTGGTTCTTCCAGGGCCCAGAAAACCTTCATGCAATGG < 41bp 0.740318463704679 0.505165687620241 0.26686293 0.15483546 prediction 0.470305552168875 Functional Loss - ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89728659 chr15:89728662 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_71874 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:89728660-89728680
64251 chr2 131976305 131976305 1 + G T LUAD 131976302 + 131976282 131976322 41 TGCCACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAGCAA TGCCACTGCTTCCCCTGCTGCAGTGGGAGCGGCAAGAGCAA < 41bp 0.735143808397867 0.341968289353182 0.8891499 0.53263056 prediction 0.470287616795733 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976302 chr2:131976305 nonsynonymous SNV 0.092 1 24 hm5C_associated_SNPs_71878 0 0 11 DDX24 POSTAR2 ENCODE chr2:131976256-131976375
64251 chr21 33686912 33686912 1 - G A rs115917390 33686914 - 33686894 33686934 41 GAGCTCATCACAGGAAATAGCTCGAGTTTGAGGCAGCACTT GAGCTCATCACAGGAAATAGCTTGAGTTTGAGGCAGCACTT < 41bp 0.783962002078511 0.548819279032346 0.38818422 0.19472513 prediction 0.47028544609233 Functional Loss - MRAP ENSG00000170262 CDS Human protein_coding chr21:33686914 chr21:33686912 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_71879 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:33686846-33686919
64251 chr16 19729693 19729693 1 + C T LUSC 19729691 + 19729671 19729711 41 AAGCCCAGCTGCTCTACAGACTCGTCGTTCACCCGGACGCC AAGCCCAGCTGCTCTACAGACTTGTCGTTCACCCGGACGCC < 41bp 0.735137349128843 0.48224714343156 0.1408506 0.13991809 prediction 0.470274698257686 Functional Loss - IQCK ENSG00000174628 CDS Human protein_coding chr16:19729691 chr16:19729693 nonsynonymous SNV 0.044 1 23 hm5C_associated_SNPs_71885 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:19729692-19729754
64251 chr4 7780519 7780519 1 + G A HNSC 7780516 + 7780496 7780536 41 CGTCCTTTTCACAACAGCCGCGGGATCCGCTTTCTTTGGCT CGTCCTTTTCACAACAGCCGCGGAATCCGCTTTCTTTGGCT < 41bp 0.765102427771685 0.529970801913773 0.9037641 0.82354176 prediction 0.470263251715823 Functional Loss - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7780516 chr4:7780519 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_71889 0 0 1 METAP2 POSTAR2 ENCODE chr4:7780498-7780579
64251 chr18 8786056 8786056 1 + C T SARC 8786054 + 8786034 8786074 41 CAGACGGGGACACCGGGAGCCACGGGCTGGGAGGCCAGACC CAGACGGGGACACCGGGAGCCATGGGCTGGGAGGCCAGACC < 41bp 0.796828373516911 0.561709000358277 0.9041811 0.9052321 prediction 0.470238746317267 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8786054 chr18:8786056 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_71896 0 0 1 FXR2 POSTAR2 ENCODE chr18:8785948-8786077
64251 chr11 61488302 61488302 1 + G T THCA 61488299 + 61488279 61488319 41 CCATCATCTGGCTGAGCATGCGCGGGGGCATCCTCTACACG CCATCATCTGGCTGAGCATGCGCTGGGGCATCCTCTACACG < 41bp 0.735106305904684 0.327415042744064 0.7928456 0.32975182 prediction 0.470212611809367 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61488299 chr11:61488302 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_71901 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:61488278-61488328
64251 chr1 6680018 6680018 1 + G T SARC 6680016 + 6679996 6680036 41 ACCTGCAGCCTACTCTCTTGCAGCGAGCCAAGCCCAGTAAC ACCTGCAGCCTACTCTCTTGCATCGAGCCAAGCCCAGTAAC < 41bp 0.735098181534984 0.388522397126348 0.66554517 0.20016792 prediction 0.470196363069968 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6680016 chr1:6680018 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_71904 0 0 4 PPIG POSTAR2 ENCODE chr1:6679983-6680197
64251 chr14 73425327 73425327 1 + G T UCEC 73425325 + 73425305 73425345 41 TCTCCTCTTTCCTAGTGGGCCAGGACTGCTACACGAGAATC TCTCCTCTTTCCTAGTGGGCCATGACTGCTACACGAGAATC < 41bp 0.735091490159508 0.393610939303134 0.5919056 0.28131574 prediction 0.470182980319016 Functional Loss - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73425325 chr14:73425327 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_71906 0 0 1 SF3B4 POSTAR2 ENCODE chr14:73425267-73425350
64251 chr2 118854157 118854157 1 + C T LUAD 118854155 + 118854135 118854175 41 GGCAGAAGGAGAGACAGAGTCACCTGGGCCCAAAAAGTGTG GGCAGAAGGAGAGACAGAGTCATCTGGGCCCAAAAAGTGTG < 41bp 0.735089725419361 0.454158560128199 0.11847615 0.16306633 prediction 0.470179450838722 Functional Loss - INSIG2 ENSG00000125629 CDS Human protein_coding chr2:118854155 chr2:118854157 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_71909 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr2:118854136-118854157
64251 chr2 48026290 48026290 1 + G A LGG 48026287 + 48026267 48026307 41 ACAGGAGGAGGCCTGATCACCCCGATTTTGATGCATCTACA ACAGGAGGAGGCCTGATCACCCCAATTTTGATGCATCTACA < 41bp 0.735532665271486 0.500448600863518 0.15170375 0.16758782 prediction 0.470168128815937 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026287 chr2:48026290 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_71911 1 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:48026231-48026295
64251 chr17 80010207 80010207 1 + T C rs146708684 80010206 + 80010186 80010226 41 AGGGATAGCTCGGCCCCCAGCTCGGCCTCCTCGTCAGTGAC AGGGATAGCTCGGCCCCCAGCCCGGCCTCCTCGTCAGTGAC < 41bp 0.735083382598237 0.496764489141764 0.20535645 0.28043038 prediction 0.470166765196474 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80010206 chr17:80010207 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_71913 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80010169-80010213
64251 chr11 32615458 32615458 1 + G C HNSC 32615454 + 32615434 32615474 41 GTGGAATTGCTCGGAAGTTACACAGAGGACAATGCTTCCCA GTGGAATTGCTCGGAAGTTACACACAGGACAATGCTTCCCA < 41bp 0.828608544898996 0.593527771821184 0.043667257 0.009908825 prediction 0.470161546155624 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32615454 chr11:32615458 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_71918 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:32615421-32615462
64251 chr22 41626816 41626816 1 + G A rs73428532 41626813 + 41626793 41626833 41 CTCTGCTCCTCCTAGCTCCCCAGGGATGTTGGGGACCCAGC CTCTGCTCCTCCTAGCTCCCCAGAGATGTTGGGGACCCAGC < 41bp 0.735071982525335 0.487866328400858 0.90141404 0.6863524 prediction 0.470143965050669 Functional Loss - L3MBTL2 ENSG00000100395 UTR3 Human protein_coding chr22:41626813 chr22:41626816 . . 0 24 hm5C_associated_SNPs_71923 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:41626752-41626825
64251 chr16 88781082 88781082 1 + C T rs61744519 88781080 + 88781060 88781100 41 CTGACTGAGACCCGGACACCCCCGGGGCCCTGCTGTTCTCC CTGACTGAGACCCGGACACCCCTGGGGCCCTGCTGTTCTCC < 41bp 0.76601395956337 0.530942655400689 0.5473682 0.20824176 prediction 0.470142608325363 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781080 chr16:88781082 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_71924 0 0 1 PPIG POSTAR2 ENCODE chr16:88781056-88781136
64251 chr9 139739805 139739805 1 + G A UCEC 139739802 + 139739782 139739822 41 TACCCCAGGCCCTATCCGTCCGAGGAGCTCTCGGGGCCCAG TACCCCAGGCCCTATCCGTCCGAAGAGCTCTCGGGGCCCAG < 41bp 0.768977083769115 0.533906261206508 0.9053551 0.44272423 prediction 0.470141645125214 Functional Loss - C9orf172 ENSG00000232434 CDS Human protein_coding chr9:139739802 chr9:139739805 synonymous SNV . 0 24 hm5C_associated_SNPs_71925 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:139739770-139739808
64251 chr10 13151232 13151232 1 + C T UCEC 13151230 + 13151210 13151250 41 CCAAACCTGGACACGTTTACCCCGGAGGAGCTGCTGCAGCA CCAAACCTGGACACGTTTACCCTGGAGGAGCTGCTGCAGCA < 41bp 0.821064252196732 0.585995337341937 0.5590883 0.3972947 prediction 0.470137829709589 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13151230 chr10:13151232 nonsynonymous SNV 0.961 2 23 hm5C_associated_SNPs_71926 0 0 2 GRWD1 POSTAR2 ENCODE chr10:13151201-13151268
64251 chr12 52369092 52369092 1 + G A COAD 52369089 + 52369069 52369109 41 AGCTGCCTCCAGGCCAACTACACGTGTGAGACAGATGGGGC AGCTGCCTCCAGGCCAACTACACATGTGAGACAGATGGGGC < 41bp 0.759880804259812 0.524814506985845 0.90121996 0.88982487 prediction 0.470132594547933 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52369089 chr12:52369092 synonymous SNV . 0 24 hm5C_associated_SNPs_71928 0 0 4 FUS POSTAR2 GSE40653,GSM998875 chr12:52369080-52369100
64251 chr11 74351824 74351824 1 + G T rs535745499 74351822 + 74351802 74351842 41 GAGGAAATAAACTGCCATCTCTGGTAGATCAGAGACTTGGA GAGGAAATAAACTGCCATCTCTTGTAGATCAGAGACTTGGA < 41bp 0.73505920015081 0.4051617706372 0.16696987 0.1681292 prediction 0.47011840030162 Functional Loss - POLD3 ENSG00000077514 UTR3 Human protein_coding chr11:74351822 chr11:74351824 . . 0 23 hm5C_associated_SNPs_71930 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr11:74351807-74351826
64251 chr11 74351825 74351825 1 + G T rs556003065 74351822 + 74351802 74351842 41 GAGGAAATAAACTGCCATCTCTGGTAGATCAGAGACTTGGA GAGGAAATAAACTGCCATCTCTGTTAGATCAGAGACTTGGA < 41bp 0.73505920015081 0.351035207419057 0.16696987 0.057323635 prediction 0.47011840030162 Functional Loss - POLD3 ENSG00000077514 UTR3 Human protein_coding chr11:74351822 chr11:74351825 . . 0 24 hm5C_associated_SNPs_71931 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr11:74351807-74351826
64251 chr22 50988318 50988318 1 + G T CESC 50988316 + 50988296 50988336 41 GCCCTTCCCCTTGGGGAGCACCGGGGTCCTCAGTCCATTCA GCCCTTCCCCTTGGGGAGCACCTGGGTCCTCAGTCCATTCA < 41bp 0.735048488035453 0.385530246738597 0.91450346 0.47620735 prediction 0.470096976070907 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50988316 chr22:50988318 nonsynonymous SNV 0.031 3 23 hm5C_associated_SNPs_71936 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50988275-50988318
64251 chr3 127323901 127323901 1 + G A TGCT 127323898 + 127323878 127323918 41 GTGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACC GTGGGTGAGCATGGCGGGCCCCCAGCTGGAGATCCACCACC < 41bp 0.73504694700183 0.482488348686201 0.38215482 0.18463716 prediction 0.47009389400366 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323898 chr3:127323901 nonsynonymous SNV 0.557 3 24 hm5C_associated_SNPs_71937 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127323882-127323901
64251 chr4 3419203 3419203 1 + C T SKCM 3419201 + 3419181 3419221 41 AAGCGGAAAGGCGCGTTTTTCTCGTGGTCGCGGACCAGGAG AAGCGGAAAGGCGCGTTTTTCTTGTGGTCGCGGACCAGGAG < 41bp 0.812497584542833 0.577455091845271 0.8491738 0.6112141 prediction 0.470084985395124 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3419201 chr4:3419203 nonsynonymous SNV 0.362 2 23 hm5C_associated_SNPs_71939 0 0 3 BUD13 POSTAR2 ENCODE chr4:3419192-3419263
64251 chr14 32295860 32295860 1 + G T LAML 32295858 + 32295838 32295878 41 CTGTGATTGTCTCCACGCCCCAGGACATCGCATTGATGGAT CTGTGATTGTCTCCACGCCCCATGACATCGCATTGATGGAT < 41bp 0.735041056894472 0.390481705171667 0.24217078 0.00684312 prediction 0.470082113788944 Functional Loss - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32295858 chr14:32295860 nonsynonymous SNV 0.398 3 23 hm5C_associated_SNPs_71940 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:32295854-32295896
64251 chr9 32384649 32384649 1 + A C rs144354424 32384648 + 32384628 32384668 41 GGGGCGGAGCGTGGAGGCGGCAGCTGGAACCGCGCAGCGCA GGGGCGGAGCGTGGAGGCGGCCGCTGGAACCGCGCAGCGCA < 41bp 0.738636743429581 0.503596497881967 0.87990916 0.7849498 prediction 0.470080491095227 Functional Loss - ACO1 ENSG00000122729 UTR5 Human protein_coding chr9:32384648 chr9:32384649 . . 0 22 hm5C_associated_SNPs_71941 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:32384648-32384649
64251 chr9 127637317 127637317 1 + G A LUSC 127637314 + 127637294 127637334 41 TCAAGAGCAGTGAGATTGAGCAGGCTGTGCAGTCACTGGAC TCAAGAGCAGTGAGATTGAGCAGACTGTGCAGTCACTGGAC < 41bp 0.772504587667733 0.537468574709046 0.69483495 0.15885848 prediction 0.470072025917374 Functional Loss - ARPC5L ENSG00000136950 CDS Human protein_coding chr9:127637314 chr9:127637317 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_71943 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:127637278-127637393
64251 chr14 61278708 61278708 1 + C T LUSC 61278706 + 61278686 61278726 41 ATATAAATTTTTGTTTTAGACTCGAGAACAGGAAGAACTGG ATATAAATTTTTGTTTTAGACTTGAGAACAGGAAGAACTGG < 41bp 0.844053213234584 0.60901853726299 0.22592449 0.06042239 prediction 0.470069351943187 Functional Loss - MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61278706 chr14:61278708 stopgain 0.998 1 23 hm5C_associated_SNPs_71945 0 0 7 BUD13 POSTAR2 ENCODE chr14:61278695-61278779
64251 chr1 90487884 90487884 1 + C T COAD 90487882 + 90487862 90487902 41 AAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTA AAATAATCCAATAGTGAAGGCGTGATATGAACGTTTTGTTA < 41bp 0.735029486045579 0.457021962252615 0.14110044 0.18893519 prediction 0.470058972091158 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90487882 chr1:90487884 stopgain 0.975 1 23 hm5C_associated_SNPs_71946 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:90487822-90487894
64251 chr1 90487886 90487886 1 + A C KIRC 90487882 + 90487862 90487902 41 AAATAATCCAATAGTGAAGGCGCGATATGAACGTTTTGTTA AAATAATCCAATAGTGAAGGCGCGCTATGAACGTTTTGTTA < 41bp 0.735029486045579 0.332801759186201 0.14110044 0.057082236 prediction 0.470058972091158 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90487882 chr1:90487886 synonymous SNV . 0 25 hm5C_associated_SNPs_71947 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:90487822-90487894
64251 chr19 7528840 7528840 1 + G A LIHC 7528837 + 7528817 7528857 41 GACTGCACAAACAGCCCCACCAAGAGTAAGAGCGGGGCCGT GACTGCACAAACAGCCCCACCAAAAGTAAGAGCGGGGCCGT < 41bp 0.7630951353316 0.528065991662281 0.92772055 0.9218762 prediction 0.470058287338637 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7528837 chr19:7528840 synonymous SNV . 0 24 hm5C_associated_SNPs_71948 0 0 1 PRPF8 POSTAR2 ENCODE chr19:7528835-7528885
64251 chr5 153792491 153792491 1 + G A GBM 153792488 + 153792468 153792508 41 GGCTGTGTGCAGACACAAAGCACGGGGCCTTGGGCTCCCCA GGCTGTGTGCAGACACAAAGCACAGGGCCTTGGGCTCCCCA < 41bp 0.749443963465809 0.514420860333082 0.8825953 0.5455332 prediction 0.470046206265455 Functional Loss - GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153792488 chr5:153792491 nonsynonymous SNV 0.919 2 24 hm5C_associated_SNPs_71952 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153792469-153792491
64251 chr10 64565434 64565434 1 + G A rs35803962 64565431 + 64565411 64565451 41 GTGGAAGGGCCTGCCGCCTTCCTGGACATCCTGGCCCCGCC GTGGAAGGGCCTGCCGCCTTCCTAGACATCCTGGCCCCGCC < 41bp 0.735300562478017 0.500288388008696 0.17413124 0.06877634 prediction 0.470024348938644 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64565431 chr10:64565434 synonymous SNV . 0 24 hm5C_associated_SNPs_71958 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64565354-64565541
64251 chr20 20007478 20007478 1 + G T GBM 20007475 + 20007455 20007495 41 CTAGGGAAGAATGGCACGGGCACGTCACAGCTCTGTCTGTT CTAGGGAAGAATGGCACGGGCACTTCACAGCTCTGTCTGTT < 41bp 0.735009602023581 0.340237426875798 0.07473442 0.08810562 prediction 0.470019204047163 Functional Loss - NAA20 ENSG00000173418 CDS Human protein_coding chr20:20007475 chr20:20007478 nonsynonymous SNV 0.952 4 24 hm5C_associated_SNPs_71960 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:20007430-20007484
64251 chr3 47446239 47446239 1 + C T rs149197378 47446237 + 47446217 47446257 41 CAGAGTCGGGTCCCCATGGGCTCGGGCCAGGAGGCCGCTGT CAGAGTCGGGTCCCCATGGGCTTGGGCCAGGAGGCCGCTGT < 41bp 0.734999180936202 0.481213703977917 0.33227462 0.34638277 prediction 0.469998361872403 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47446237 chr3:47446239 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_71964 0 0 3 GRWD1 POSTAR2 ENCODE chr3:47446205-47446253
64251 chr3 47446240 47446240 1 + G A COAD 47446237 + 47446217 47446257 41 CAGAGTCGGGTCCCCATGGGCTCGGGCCAGGAGGCCGCTGT CAGAGTCGGGTCCCCATGGGCTCAGGCCAGGAGGCCGCTGT < 41bp 0.734999180936202 0.497924519758517 0.33227462 0.22520593 prediction 0.469998361872403 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47446237 chr3:47446240 synonymous SNV . 0 24 hm5C_associated_SNPs_71965 0 0 3 GRWD1 POSTAR2 ENCODE chr3:47446205-47446253
64251 chr6 106960867 106960867 1 + G A SKCM 106960864 + 106960844 106960884 41 GACGCCGACGGCTTGAAGCCCAGGAACCATTTCGGCGTGGG GACGCCGACGGCTTGAAGCCCAGAAACCATTTCGGCGTGGG < 41bp 0.753528417816873 0.518531874303728 0.5092173 0.30358252 prediction 0.46999308702629 Functional Loss - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106960864 chr6:106960867 synonymous SNV . 0 24 hm5C_associated_SNPs_71966 0 0 1 EIF3H POSTAR2 ENCODE chr6:106960768-106960902
64251 chr19 12920928 12920928 1 + G A COAD 12920925 + 12920905 12920945 41 GATGCCAGAGACATACCAGGCGCGGCTGCAGCAAAGTTTTC GATGCCAGAGACATACCAGGCGCAGCTGCAGCAAAGTTTTC < 41bp 0.738364130571373 0.503375967866749 0.08764115 0.01564315 prediction 0.469976325409248 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12920925 chr19:12920928 nonsynonymous SNV 0.160 3 24 hm5C_associated_SNPs_71971 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12920894-12920940
64251 chr3 158519869 158519869 1 + G C rs370824770 158519865 + 158519845 158519885 41 TCATGTGACCGCCGTCTTGACAGTGTTCCACGGGCGCTGCT TCATGTGACCGCCGTCTTGACAGTCTTCCACGGGCGCTGCT < 41bp 0.734981540422069 0.437979621641063 0.07591301 0.11761448 prediction 0.469963080844138 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519865 chr3:158519869 synonymous SNV . 0 25 hm5C_associated_SNPs_71974 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:158519869-158519890
64251 chr22 50615829 50615829 1 + C T CESC 50615827 + 50615807 50615847 41 CCTGGCCAAGCTGTACCTGGCGCGGCACGTGCTGATCCTGC CCTGGCCAAGCTGTACCTGGCGTGGCACGTGCTGATCCTGC < 41bp 0.744268861527095 0.509288902148643 0.707873 0.56297076 prediction 0.469959918756904 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615827 chr22:50615829 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_71977 0 0 1 UCHL5 POSTAR2 ENCODE chr22:50615737-50615861
64251 chr22 39127461 39127461 1 + C T rs376261872 39127459 + 39127439 39127479 41 GATTATAGGACTCTCCCCATCTCGGGCCCTGACCCTGACCC GATTATAGGACTCTCCCCATCTTGGGCCCTGACCCTGACCC < 41bp 0.734978522810367 0.496105037814846 0.2121737 0.23944744 prediction 0.469957045620735 Functional Loss - GTPBP1 ENSG00000100226 UTR3 Human protein_coding chr22:39127459 chr22:39127461 . . 0 23 hm5C_associated_SNPs_71979 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39127403-39127492
64251 chr17 57288253 57288253 1 + C T UCEC 57288251 + 57288231 57288271 41 AGCCCTCAAGGTAGAACCTCCTCGGAACCAAGACCCAGCTC AGCCCTCAAGGTAGAACCTCCTTGGAACCAAGACCCAGCTC < 41bp 0.801691052720191 0.566713230897495 0.15817967 0.08084524 prediction 0.469955643645392 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57288251 chr17:57288253 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_71980 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:57288215-57288253
64251 chr14 59970736 59970736 1 + T C UCEC 59970735 + 59970715 59970755 41 AGCCCTTTTTTACTTGTTCACTGCAAAATTTACCGAACCTT AGCCCTTTTTTACTTGTTCACCGCAAAATTTACCGAACCTT < 41bp 0.734977113778189 0.487655768953985 0.13175654 0.04244724 prediction 0.469954227556378 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59970735 chr14:59970736 synonymous SNV . 0 22 hm5C_associated_SNPs_71982 0 0 4 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chr14:59970720-59970740
64251 chr3 183885731 183885731 1 + C T CESC 183885729 + 183885709 183885749 41 TACCACAATGTGGAAGGCTTCACGGACCGGAGGGAGGCCCG TACCACAATGTGGAAGGCTTCATGGACCGGAGGGAGGCCCG < 41bp 0.824134991762949 0.589159818175566 0.24638093 0.16009283 prediction 0.469950347174767 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885729 chr3:183885731 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_71985 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:183885708-183885732
64251 chr12 2930444 2930444 1 + C T UCEC 2930442 + 2930422 2930462 41 GCACAGGGAGACCCCAGCTGCCCGAGACGTGGTGCTGCACC GCACAGGGAGACCCCAGCTGCCTGAGACGTGGTGCTGCACC < 41bp 0.734973959017056 0.450654511418865 0.09262091 0.13896796 prediction 0.469947918034111 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930442 chr12:2930444 stopgain 0.985 1 23 hm5C_associated_SNPs_71986 0 0 1 PPIG POSTAR2 ENCODE chr12:2930426-2930460
64251 chr1 165859500 165859500 1 + G T UCEC 165859497 + 165859477 165859517 41 CAGAATGAGGTGGACTATCGCCAGAAGCAGGTGGTCATCCT CAGAATGAGGTGGACTATCGCCATAAGCAGGTGGTCATCCT < 41bp 0.734970967829656 0.341054131231803 0.9283216 0.9185424 prediction 0.469941935659312 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165859497 chr1:165859500 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_71990 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:165859450-165859517
64251 chr17 19445795 19445795 1 + G A LUSC 19445792 + 19445772 19445812 41 AAGCTGGAGCTGGATGCAGTCACGCTGGCAATCGCGGTACG AAGCTGGAGCTGGATGCAGTCACACTGGCAATCGCGGTACG < 41bp 0.734970648045107 0.495872673919606 0.41152903 0.4068179 prediction 0.469941296090213 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19445792 chr17:19445795 synonymous SNV . 0 24 hm5C_associated_SNPs_71991 0 0 3 DDX3X POSTAR2 ENCODE chr17:19445728-19445801
64251 chr8 56863296 56863296 1 + G A SKCM 56863293 + 56863273 56863313 41 AGAAAGGCAGCTTTTGGCACCAGGAAATAGCGCTGGAGCTT AGAAAGGCAGCTTTTGGCACCAGAAAATAGCGCTGGAGCTT < 41bp 0.734965539105097 0.498943894065418 0.5160777 0.28721857 prediction 0.469931078210194 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56863293 chr8:56863296 nonsynonymous SNV 0.819 1 24 hm5C_associated_SNPs_71993 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:56863283-56863321
64251 chr17 1939269 1939269 1 + C T TGCT 1939267 + 1939247 1939287 41 CGCCCCTGTGCCCGCAGGTTCACGGAGGCCGAAGTGATGGT CGCCCCTGTGCCCGCAGGTTCATGGAGGCCGAAGTGATGGT < 41bp 0.757205444594721 0.522246259845925 0.62018716 0.6653413 prediction 0.46991836949759 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1939267 chr17:1939269 nonsynonymous SNV 0.946 4 23 hm5C_associated_SNPs_71996 0 0 6 DDX24 POSTAR2 ENCODE chr17:1939263-1939338
64251 chr7 56119593 56119593 1 + G T SARC 56119590 + 56119570 56119610 41 AGGCCGAGGTGGCCCGAGCGCAGGCGGCGCTGGCGGTCAAC AGGCCGAGGTGGCCCGAGCGCAGTCGGCGCTGGCGGTCAAC < 41bp 0.923640485987325 0.688681695490308 0.8980102 0.8280127 prediction 0.469917580994035 Functional Loss - CCT6A ENSG00000146731 CDS Human protein_coding chr7:56119590 chr7:56119593 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_71998 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:56119587-56119624
64251 chr22 29442814 29442814 1 + C T BLCA 29442812 + 29442792 29442832 41 GCTGTGGGGCCCTGGACACACTCAGCAGCAGCTCCACGTCC GCTGTGGGGCCCTGGACACACTTAGCAGCAGCTCCACGTCC < 41bp 0.734948901816233 0.453009376376446 0.029615074 0.08491227 prediction 0.469897803632466 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29442812 chr22:29442814 synonymous SNV . 0 23 hm5C_associated_SNPs_72000 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:29442757-29442815
64251 chr17 30650030 30650030 1 + G T rs34202966 30650027 + 30650007 30650047 41 TAGCAGGGTCCAGGGTCAGTCAGGCCAGGCATTTGGGGTCT TAGCAGGGTCCAGGGTCAGTCAGTCCAGGCATTTGGGGTCT < 41bp 0.734941312330618 0.366411928511264 0.9201387 0.86351264 prediction 0.469882624661235 Functional Loss - RHBDL3 ENSG00000141314 UTR3 Human protein_coding chr17:30650027 chr17:30650030 . . 0 24 hm5C_associated_SNPs_72002 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr17:30650020-30650040
64251 chr7 120629802 120629802 1 + G T LUAD 120629800 + 120629780 120629820 41 CCGAGGGTCGAGGAAGCTCACAGCCGCTGCCCCTGGGGCTG CCGAGGGTCGAGGAAGCTCACATCCGCTGCCCCTGGGGCTG < 41bp 0.734940531505219 0.384594558104457 0.56251997 0.16740209 prediction 0.469881063010437 Functional Loss - CPED1 ENSG00000106034 CDS Human protein_coding chr7:120629800 chr7:120629802 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_72003 0 0 1 RBM15 POSTAR2 ENCODE chr7:120629733-120629826
64251 chr11 63721885 63721885 1 + G A rs374740879 63721882 + 63721862 63721902 41 TGCTCCTATGAGATCCTGAGCCGGAGGACCAAGTTTGGGGA TGCTCCTATGAGATCCTGAGCCGAAGGACCAAGTTTGGGGA < 41bp 0.734937750952998 0.498687740053417 0.87320316 0.31297967 prediction 0.469875501905997 Functional Loss - NAA40 ENSG00000110583 CDS Human protein_coding chr11:63721882 chr11:63721885 synonymous SNV . 0 24 hm5C_associated_SNPs_72004 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:63721845-63721892
64251 chr17 4925485 4925485 1 + G A UCEC 4925482 + 4925462 4925502 41 CGGGAGCAGCTGCCGCCCACCACGGTCCAGACCATTGTCAA CGGGAGCAGCTGCCGCCCACCACAGTCCAGACCATTGTCAA < 41bp 0.734932803681393 0.497626953825415 0.13186023 0.19883701 prediction 0.469865607362785 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4925482 chr17:4925485 synonymous SNV . 0 24 hm5C_associated_SNPs_72007 0 0 3 GRWD1 POSTAR2 ENCODE chr17:4925438-4925487
64251 chr8 95655623 95655623 1 + G T LUSC 95655621 + 95655601 95655641 41 AGCTTCATGTCAGGCAAATCCTGCATCCTGAGGCTTCCAAG AGCTTCATGTCAGGCAAATCCTTCATCCTGAGGCTTCCAAG < 41bp 0.890210747403848 0.655280395213762 0.34360367 0.11962488 prediction 0.469860704380173 Functional Loss - ESRP1 ENSG00000104413 CDS Human protein_coding chr8:95655621 chr8:95655623 synonymous SNV . 0 23 hm5C_associated_SNPs_72009 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:95655590-95655628
64251 chr16 83999319 83999319 1 + G A LUSC 83999316 + 83999296 83999336 41 GCCAGGCCGTGTTCCAGGACCTCGAGGGTGTCGAGAAGGTG GCCAGGCCGTGTTCCAGGACCTCAAGGGTGTCGAGAAGGTG < 41bp 0.77132472232063 0.536394626146889 0.50323594 0.44760746 prediction 0.469860192347481 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83999316 chr16:83999319 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_72010 0 0 1 RBM15 POSTAR2 ENCODE chr16:83999315-83999373
64251 chr7 150771274 150771274 1 + G A UCEC 150771271 + 150771251 150771291 41 GCAGTCTGGGCAGGGGAAGCCCCGGGGCCAGCCCAACACGG GCAGTCTGGGCAGGGGAAGCCCCAGGGCCAGCCCAACACGG < 41bp 0.734924895255186 0.485828203991367 0.8665565 0.9064736 prediction 0.469849790510372 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771271 chr7:150771274 nonsynonymous SNV 0.542 0 24 hm5C_associated_SNPs_72011 0 0 2 GRSF1 POSTAR2 ENCODE chr7:150771208-150771317
64251 chrX 153667407 153667407 1 + G A COAD 153667404 + 153667384 153667424 41 GTGACTCGCTACCTGGACTTCAAGGTGGTGGAGGGCAGCTT GTGACTCGCTACCTGGACTTCAAAGTGGTGGAGGGCAGCTT < 41bp 0.75327820750277 0.518356971425902 0.81413686 0.6935891 prediction 0.469842472153736 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153667404 chrX:153667407 synonymous SNV . 0 24 hm5C_associated_SNPs_72013 1 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:153667377-153667426
64251 chr12 110019342 110019342 1 + G C PRAD 110019338 + 110019318 110019358 41 ATCCCAAACCCGCTGAAGGACGGGGATTGCGTCAACAGGTA ATCCCAAACCCGCTGAAGGACGGGCATTGCGTCAACAGGTA < 41bp 0.856670262472416 0.621750974537816 0.8492748 0.34052733 prediction 0.4698385758692 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110019338 chr12:110019342 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_72015 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:110019317-110019346
64251 chr1 32669914 32669914 1 + T C UCEC 32669913 + 32669893 32669933 41 AGAGGAAGAGGATGGGGTCACTGAGGGGCTGCCAGAGGAGC AGAGGAAGAGGATGGGGTCACCGAGGGGCTGCCAGAGGAGC < 41bp 0.763591700034768 0.528675402266182 0.76778984 0.786132 prediction 0.469832595537171 Functional Loss - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32669913 chr1:32669914 synonymous SNV . 0 22 hm5C_associated_SNPs_72017 0 0 9 DDX55 POSTAR2 ENCODE chr1:32669860-32669930
64251 chr9 100396052 100396052 1 + G C rs73551097 100396051 + 100396031 100396071 41 GTGGCGAGCTAGTGCGCCTGCGTGCCGGCCCATCCGCGCGC GTGGCGAGCTAGTGCGCCTGCCTGCCGGCCCATCCGCGCGC < 41bp 0.746556953437349 0.511648329566907 0.90258926 0.57453 prediction 0.469817247740884 Functional Loss - NCBP1 ENSG00000136937 UTR5 Human protein_coding chr9:100396051 chr9:100396052 . . 0 22 hm5C_associated_SNPs_72019 0 0 4 DDX3X POSTAR2 ENCODE chr9:100396023-100396071
64251 chr19 49507654 49507654 1 + G T UCEC 49507652 + 49507632 49507672 41 TATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCA TATTGCTGGCCAGCCGGGCACGTGGAAGACGGCCATCGCCA < 41bp 0.906076126630417 0.6711693142477 0.9042694 0.498905 prediction 0.469813624765434 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49507652 chr19:49507654 nonsynonymous SNV 0.221 3 23 hm5C_associated_SNPs_72022 0 0 10 DDX24 POSTAR2 ENCODE chr19:49507603-49507673
64251 chr22 50609275 50609275 1 + C T COAD 50609273 + 50609253 50609293 41 GACAAGGCGGGCGCGCTGGCCGCGCTGCTTCTGCAGCTGAA GACAAGGCGGGCGCGCTGGCCGTGCTGCTTCTGCAGCTGAA < 41bp 0.7406018130644 0.505698222755015 0.19261104 0.18044081 prediction 0.469807180618771 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50609273 chr22:50609275 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_72026 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:50609256-50609291
64251 chr17 40715086 40715086 1 + C T BLCA 40715084 + 40715064 40715104 41 AGCTGTTGTCCGCGACTGGCCTCGGTGCTGCTATACTCCGA AGCTGTTGTCCGCGACTGGCCTTGGTGCTGCTATACTCCGA < 41bp 0.79536488056848 0.560467924695666 0.18291125 0.2327351 prediction 0.469793911745629 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40715084 chr17:40715086 nonsynonymous SNV 0.113 4 23 hm5C_associated_SNPs_72028 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:40715046-40715099
64251 chr13 113783916 113783916 1 + G T SARC 113783914 + 113783894 113783934 41 GCCCGCGAGGTCTTTGAGGACAGCGACAAGACGGTAAGGGC GCCCGCGAGGTCTTTGAGGACATCGACAAGACGGTAAGGGC < 41bp 0.734893405069129 0.375895688901035 0.64087385 0.4160476 prediction 0.469786810138259 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113783914 chr13:113783916 nonsynonymous SNV 0.014 1 23 hm5C_associated_SNPs_72030 0 0 3 GRWD1 POSTAR2 ENCODE chr13:113783901-113783925
64251 chr1 173703125 173703125 1 + A T KIRC 173703121 + 173703101 173703141 41 CTACTTCCGAGCTATGTTTACAGGAGAATTGGCAGAGAGCC CTACTTCCGAGCTATGTTTACAGGTGAATTGGCAGAGAGCC < 41bp 0.868464221082734 0.6335743949685 0.9004098 0.9009639 prediction 0.469779652228467 Functional Loss - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173703121 chr1:173703125 synonymous SNV . 0 25 hm5C_associated_SNPs_72032 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:173703121-173703161
64251 chr10 70513716 70513716 1 + G T UCEC 70513713 + 70513693 70513733 41 GGTGGATGCTTTCCCTTTGTCAAGACCATTTCAGCTGGGAA GGTGGATGCTTTCCCTTTGTCAATACCATTTCAGCTGGGAA < 41bp 0.734883708609009 0.355846859287819 0.3495891 0.06912464 prediction 0.469767417218017 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70513713 chr10:70513716 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72036 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70513578-70513819
64251 chr19 51729165 51729165 1 + G A SKCM 51729162 + 51729142 51729182 41 GCCTGTGAGCAGGGAACACCCCCGATCTTCTCCTGGTTGTC GCCTGTGAGCAGGGAACACCCCCAATCTTCTCCTGGTTGTC < 41bp 0.762680386673743 0.527800130678759 0.2417363 0.11643574 prediction 0.469760511989968 Functional Loss - CD33 ENSG00000105383 CDS Human protein_coding chr19:51729162 chr19:51729165 synonymous SNV . 0 24 hm5C_associated_SNPs_72037 0 0 2 IGF2BP2 POSTAR2 ENCODE chr19:51729074-51729290
64251 chrX 54839433 54839433 1 + A C SARC 54839432 + 54839412 54839452 41 GTGCTTCTTAGCATCATCTTCATGAATGGAAATCGGTCCAG GTGCTTCTTAGCATCATCTTCCTGAATGGAAATCGGTCCAG < 41bp 0.802177302612335 0.567305381425515 0.10923582 0.093830466 prediction 0.469743842373639 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54839432 chrX:54839433 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_72041 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54839418-54839446
64251 chr1 207241638 207241638 1 + T C LUSC 207241637 + 207241617 207241657 41 CCTATGAGCAGTGGAAGATTCTGAATGAGATTGATGCTGTG CCTATGAGCAGTGGAAGATTCCGAATGAGATTGATGCTGTG < 41bp 0.768387941818544 0.533518222518588 0.6270625 0.3537282 prediction 0.469739438599911 Functional Loss - PFKFB2 ENSG00000123836 CDS Human protein_coding chr1:207241637 chr1:207241638 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_72042 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:207241592-207241645
64251 chr1 112002231 112002231 1 + C T UCEC 112002229 + 112002209 112002249 41 TGATAAATTGGGTGGAGAAGCACGTGGTGCAAAGCATCTCC TGATAAATTGGGTGGAGAAGCATGTGGTGCAAAGCATCTCC < 41bp 0.81211829526607 0.577260198865416 0.33429283 0.23637605 prediction 0.469716192801308 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:112002229 chr1:112002231 synonymous SNV . 0 23 hm5C_associated_SNPs_72045 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr1:112002210-112002240
64251 chr9 131285047 131285047 1 + T C UCEC 131285046 + 131285026 131285066 41 GGTTTGATGAATGGAAGGAACTGAAGCAGCATAAAGAATTC GGTTTGATGAATGGAAGGAACCGAAGCAGCATAAAGAATTC < 41bp 0.734848020389719 0.486562945865446 0.34050086 0.2344639 prediction 0.469696040779438 Functional Loss - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131285046 chr9:131285047 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_72050 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131285029-131285051
64251 chr4 177069435 177069435 1 + C T UCEC 177069433 + 177069413 177069453 41 TACTATAAAAGTATGGGACACTCGAGAAGGAACTTGTGTGG TACTATAAAAGTATGGGACACTTGAGAAGGAACTTGTGTGG < 41bp 0.734845950860022 0.442255072679663 0.34688848 0.12562853 prediction 0.469691901720043 Functional Loss - WDR17 ENSG00000150627 CDS Human protein_coding chr4:177069433 chr4:177069435 stopgain 0.993 1 23 hm5C_associated_SNPs_72051 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr4:177069421-177069459
64251 chr16 28996757 28996757 1 + G T rs181949767 28996754 + 28996734 28996774 41 TGCAGATGGAGGAGGCCATCCTGGTCCCCTGCGTGCTGGGG TGCAGATGGAGGAGGCCATCCTGTTCCCCTGCGTGCTGGGG < 41bp 0.734840925796936 0.4073254203807 0.25313014 0.06311381 prediction 0.469681851593873 Functional Loss - LAT ENSG00000213658 CDS Human protein_coding chr16:28996754 chr16:28996757 nonsynonymous SNV 0.005 1 24 hm5C_associated_SNPs_72054 0 0 1 PPIG POSTAR2 ENCODE chr16:28996744-28996842
64251 chr3 122399911 122399911 1 + G T UCEC 122399908 + 122399888 122399928 41 GCTTCCTGGTGTTCTTCTACCCGGAGGACGGTGAGGGGCGC GCTTCCTGGTGTTCTTCTACCCGTAGGACGGTGAGGGGCGC < 41bp 0.908620570979465 0.67378700035155 0.87722224 0.2582097 prediction 0.469667141255829 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399908 chr3:122399911 stopgain 0.788 0 24 hm5C_associated_SNPs_72060 0 0 2 DROSHA POSTAR2 ENCODE chr3:122399901-122399947
64251 chr19 13875821 13875821 1 + G T rs201171443 13875818 + 13875798 13875838 41 GCTGAGCTTCCTCGTCACCGCCCGGCCCACCGCTGTCAACA GCTGAGCTTCCTCGTCACCGCCCTGCCCACCGCTGTCAACA < 41bp 0.734831837954737 0.332975998656165 0.29930028 0.07982063 prediction 0.469663675909474 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13875818 chr19:13875821 nonsynonymous SNV 0.004 4 24 hm5C_associated_SNPs_72061 0 0 2 PPIG POSTAR2 ENCODE chr19:13875806-13875843
64251 chr15 64418364 64418364 1 + G A SKCM 64418361 + 64418341 64418381 41 GGTCTTTATGAGAAGCTTTCCGAGAAGCACTCTCAGAATGG GGTCTTTATGAGAAGCTTTCCGAAAAGCACTCTCAGAATGG < 41bp 0.752317520239416 0.517485978652409 0.7419864 0.21079326 prediction 0.469663083174014 Functional Loss - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418361 chr15:64418364 synonymous SNV . 0 24 hm5C_associated_SNPs_72062 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr20 61457204 61457204 1 + G A CESC 61457201 + 61457181 61457221 41 CCCCCTGGGCCCGCCGGCCTCCCGGGCAGCGTGGGGCTGCA CCCCCTGGGCCCGCCGGCCTCCCAGGCAGCGTGGGGCTGCA < 41bp 0.759714771201847 0.524899368245722 0.4749749 0.17273316 prediction 0.46963080591225 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61457201 chr20:61457204 synonymous SNV . 0 24 hm5C_associated_SNPs_72072 0 0 5 BUD13 POSTAR2 ENCODE chr20:61457169-61457220
64251 chr22 24034583 24034583 1 - C A PCPG 24034585 - 24034565 24034605 41 ATCCGGAAAGATGACCGTTGCGGGGGCTGATAGTAAACTGA ATCCGGAAAGATGACCGTTGCGTGGGCTGATAGTAAACTGA < 41bp 0.734810836715101 0.393284374065758 0.9047798 0.56471425 prediction 0.469621673430202 Functional Loss - RGL4 ENSG00000159496 CDS Human protein_coding chr22:24034585 chr22:24034583 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_72074 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:24034482-24034605
64251 chr4 25315715 25315715 1 + C T COAD 25315713 + 25315693 25315733 41 GACCCAAGGGAAAGAAGAAACTCGGAGGTTTTATGCCTGTT GACCCAAGGGAAAGAAGAAACTTGGAGGTTTTATGCCTGTT < 41bp 0.838045637281 0.603236853020577 0.20379585 0.18654671 prediction 0.469617568520846 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25315713 chr4:25315715 nonsynonymous SNV 0.973 1 23 hm5C_associated_SNPs_72076 0 0 1 UCHL5 POSTAR2 ENCODE chr4:25315681-25315736
64251 chr16 70497609 70497609 1 + A C BRCA 70497608 + 70497588 70497628 41 GACCCAGAGAAGCGTGTGGGCAGCGGAGGAGCCACCCTCAA GACCCAGAGAAGCGTGTGGGCCGCGGAGGAGCCACCCTCAA < 41bp 0.782872141236421 0.54806381396278 0.90311176 0.597901 prediction 0.469616654547284 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70497608 chr16:70497609 nonsynonymous SNV 0.875 3 22 hm5C_associated_SNPs_72077 0 0 2 BUD13 POSTAR2 ENCODE chr16:70497594-70497646
64251 chr16 27374148 27374148 1 + C T rs34727572 27374146 + 27374126 27374166 41 ACAGAGACGCCCCTCGTCATCGCAGGCAACCCTGCTTACCG ACAGAGACGCCCCTCGTCATCGTAGGCAACCCTGCTTACCG < 41bp 0.77188757584377 0.537079658098403 0.904884 0.9241065 prediction 0.469615835490734 Functional Loss - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374146 chr16:27374148 nonsynonymous SNV 0.031 1 23 hm5C_associated_SNPs_72079 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:27374119-27374167
64251 chr9 101904939 101904939 1 + G A LUSC 101904936 + 101904916 101904956 41 ATGATAAAACTTGCTCTGTCCACGGCGAGCGGTCTTGCCCA ATGATAAAACTTGCTCTGTCCACAGCGAGCGGTCTTGCCCA < 41bp 0.753307724695653 0.518501074284389 0.24995628 0.06133181 prediction 0.469613300822528 Functional Loss - TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101904936 chr9:101904939 synonymous SNV . 0 24 hm5C_associated_SNPs_72081 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:101904918-101904942
64251 chrX 47032551 47032551 1 + G A COAD 47032548 + 47032528 47032568 41 TCCGTGGCCAGCTGCAGTCGCACGGCGTGCAAGCACGGGAG TCCGTGGCCAGCTGCAGTCGCACAGCGTGCAAGCACGGGAG < 41bp 0.785897463060791 0.551092901380001 0.26624334 0.16017514 prediction 0.46960912336158 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47032548 chrX:47032551 nonsynonymous SNV 0.899 4 24 hm5C_associated_SNPs_72083 0 0 1 PRPF8 POSTAR2 ENCODE chrX:47032536-47032633
64251 chr7 2472730 2472730 1 + G A rs61754096 2472727 + 2472707 2472747 41 GCATTCGACGACATCCCCAACTCGGAGCTGAGCCACCTGAT GCATTCGACGACATCCCCAACTCAGAGCTGAGCCACCTGAT < 41bp 0.756275667283489 0.521481303360584 0.27569532 0.14406636 prediction 0.46958872784581 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472727 chr7:2472730 synonymous SNV . 0 24 hm5C_associated_SNPs_72088 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr7:2472718-2472745
64251 chr1 240371060 240371060 1 + G A BLCA 240371057 + 240371037 240371077 41 ACCTCCTCCACCCCCTCTACCCGGAGCGGGCATACCCCCTC ACCTCCTCCACCCCCTCTACCCGAAGCGGGCATACCCCCTC < 41bp 0.761942565312607 0.527162032088803 0.9459838 0.82051355 prediction 0.469561066447609 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240371057 chr1:240371060 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_72097 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:240371060-240371080
64251 chrX 67937975 67937975 1 + C T BLCA 67937973 + 67937953 67937993 41 GCAACGAGTAGAGCTGTGGTCTCGGGCCATGTACCCAGACC GCAACGAGTAGAGCTGTGGTCTTGGGCCATGTACCCAGACC < 41bp 0.801041538865155 0.566267762323916 0.2647075 0.2334145 prediction 0.469547553082479 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67937973 chrX:67937975 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_72102 0 0 3 FMR1 POSTAR2 ENCODE chrX:67937955-67938002
64251 chr1 28598336 28598336 1 + C T COAD 28598334 + 28598314 28598354 41 CTGCACTACCTGCTGCTGCACACGGATGGTCCCTTGGCCAG CTGCACTACCTGCTGCTGCACATGGATGGTCCCTTGGCCAG < 41bp 0.807234570630603 0.572470917959114 0.37588474 0.49574274 prediction 0.469527305342979 Functional Loss - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28598334 chr1:28598336 nonsynonymous SNV 0.974 1 23 hm5C_associated_SNPs_72104 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:28598297-28598344
64251 chr4 7055807 7055807 1 + G A UCEC 7055804 + 7055784 7055824 41 CGTAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACT CGTAGGAAGATATGGCTGCCCACATTGGTGCTTCCCGGACT < 41bp 0.745774926172236 0.511017117233819 0.20370507 0.13347614 prediction 0.469515617876832 Functional Loss - TADA2B ENSG00000173011 CDS Human protein_coding chr4:7055804 chr4:7055807 nonsynonymous SNV 0.010 1 24 hm5C_associated_SNPs_72107 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:7055798-7055842
64251 chr11 76257110 76257110 1 + T C PRAD 76257109 + 76257089 76257129 41 TCTTGCCACTAGCATGCTCACTGGTGAAGCAGGATCATTAC TCTTGCCACTAGCATGCTCACCGGTGAAGCAGGATCATTAC < 41bp 0.734746059442305 0.498269187410926 0.21041039 0.23081642 prediction 0.46949211888461 Functional Loss - EMSY ENSG00000158636 CDS Human protein_coding chr11:76257109 chr11:76257110 synonymous SNV . 0 22 hm5C_associated_SNPs_72118 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:76257087-76257122
64251 chr22 44547423 44547423 1 + G A CESC 44547420 + 44547400 44547440 41 TGAATTTGGAGGTGACGGAACTGGAGACCCAGGTATGTGCT TGAATTTGGAGGTGACGGAACTGAAGACCCAGGTATGTGCT < 41bp 0.734743024181676 0.491982763489117 0.6965407 0.35043755 prediction 0.469486048363352 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44547420 chr22:44547423 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_72121 0 0 1 DDX24 POSTAR2 ENCODE chr22:44547384-44547434
64251 chr19 12024455 12024455 1 + C T rs169404 12024453 + 12024433 12024473 41 AGACCTCATGATTCGCCTGCCTCGGCCTCCCAAAATGCTGG AGACCTCATGATTCGCCTGCCTTGGCCTCCCAAAATGCTGG < 41bp 0.734738958069231 0.498002195176711 0.113784224 0.11469647 prediction 0.469477916138461 Functional Loss - ZNF69 ENSG00000198429 UTR3 Human protein_coding chr19:12024453 chr19:12024455 . . 0 23 hm5C_associated_SNPs_72123 0 0 1 ILF3 POSTAR2 ENCODE chr19:12024441-12024506
64251 chr2 228389506 228389506 1 + A C PRAD 228389505 + 228389485 228389525 41 TTGTAGGTCGTTCTCAAGGGCAGCAGCAGGAGAAGAAGCAA TTGTAGGTCGTTCTCAAGGGCCGCAGCAGGAGAAGAAGCAA < 41bp 0.734729316446426 0.491114653659968 0.1301988 0.07880247 prediction 0.469458632892852 Functional Loss - AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228389505 chr2:228389506 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_72125 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:228389491-228389516
64251 chr15 89020277 89020277 1 + G T STAD 89020275 + 89020255 89020295 41 TGTGGTGAAAGGCCTGGGGCCAGGACGCTTGGTAAGTTACA TGTGGTGAAAGGCCTGGGGCCATGACGCTTGGTAAGTTACA < 41bp 0.734728185271399 0.38952387596146 0.4625224 0.12854531 prediction 0.469456370542799 Functional Loss - MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89020275 chr15:89020277 stopgain 0.995 1 23 hm5C_associated_SNPs_72126 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:89020249-89020282
64251 chr3 38045795 38045795 1 + A C rs184474807 38045791 + 38045771 38045811 41 CAGCCACGACTGTTTGAGTGCTCCAGCCACATGGGCTGCCT CAGCCACGACTGTTTGAGTGCTCCCGCCACATGGGCTGCCT < 41bp 0.734704956579917 0.293660257021149 0.61910206 0.07221338 prediction 0.469409913159834 Functional Loss - VILL ENSG00000136059 CDS Human protein_coding chr3:38045791 chr3:38045795 nonsynonymous SNV 0.975 1 25 hm5C_associated_SNPs_72131 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039845 chr3:38045780-38045800
64251 chr15 42129083 42129083 1 + C T rs117869806 42129081 + 42129061 42129101 41 CGGTGCGGGCCGGTGAGATGCTCTATCTGCCGGCTCTGTGG CGGTGCGGGCCGGTGAGATGCTTTATCTGCCGGCTCTGTGG < 41bp 0.734701692203534 0.465009299472447 0.9361467 0.30655295 prediction 0.469403384407067 Functional Loss - JMJD7 ENSG00000168970;ENSG00000243789 CDS Human other chr15:42129081 chr15:42129083 synonymous SNV . 0 23 hm5C_associated_SNPs_72134 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:42129083-42129106
64251 chr1 90473104 90473104 1 + C T SKCM 90473102 + 90473082 90473122 41 TCTAGCTGGGAAGCACCTTACTCCCGTTCAAAATTGAGGCC TCTAGCTGGGAAGCACCTTACTTCCGTTCAAAATTGAGGCC < 41bp 0.7346899287531 0.446603718414536 0.2935782 0.22074252 prediction 0.4693798575062 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473102 chr1:90473104 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_72139 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr1:90473069-90473111
64251 chr3 87302886 87302886 1 + C T READ 87302884 + 87302864 87302904 41 GGCCAAAGCTCCATCAGCTGCTCGAAGCTTACCATCTGCCT GGCCAAAGCTCCATCAGCTGCTTGAAGCTTACCATCTGCCT < 41bp 0.805634311210689 0.570950610342372 0.29973823 0.040712267 prediction 0.469367401736634 Functional Loss - CHMP2B ENSG00000083937 CDS Human protein_coding chr3:87302884 chr3:87302886 stopgain 0.145 1 23 hm5C_associated_SNPs_72142 2 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:87302867-87302906
64251 chr10 5790031 5790031 1 + A C UCEC 5790027 + 5790007 5790047 41 TCCTGAAAAACTGGTAAAATCAGGAAATCCATTGCAGCCAG TCCTGAAAAACTGGTAAAATCAGGCAATCCATTGCAGCCAG < 41bp 0.915218704122024 0.680535562638968 0.90812373 0.89570546 prediction 0.469366282966112 Functional Loss - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5790027 chr10:5790031 synonymous SNV . 0 25 hm5C_associated_SNPs_72143 0 0 8 CSTF2 POSTAR2 GSE37401,GSM917676 chr10:5789998-5790036
64251 chr7 100732402 100732402 1 + G T LUAD 100732399 + 100732379 100732419 41 GCACTGCCTAGCGGGGACCGCGTGGCTGTCAGCGTGGCGGG GCACTGCCTAGCGGGGACCGCGTTGCTGTCAGCGTGGCGGG < 41bp 0.734677453555819 0.335377526901635 0.6649331 0.21306887 prediction 0.469354907111639 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732399 chr7:100732402 synonymous SNV . 0 24 hm5C_associated_SNPs_72144 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr7:100732376-100732407
64251 chr7 134613556 134613556 1 + G T SARC 134613554 + 134613534 134613574 41 AAGAGGAGGCAGCCCGGGAACGGCGCCGCCGAGCCCGACAG AAGAGGAGGCAGCCCGGGAACGTCGCCGCCGAGCCCGACAG < 41bp 0.894526820413714 0.659850056610671 0.5971314 0.23368844 prediction 0.469353527606085 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134613554 chr7:134613556 synonymous SNV . 0 23 hm5C_associated_SNPs_72145 0 0 6 AGGF1 POSTAR2 ENCODE chr7:134613549-134613651
64251 chr13 113976753 113976753 1 + A C rs548499764 113976752 + 113976732 113976772 41 TCTAGCCTGGTGCACGCAGGCACAGCAGCTGCAGGGGCCTC TCTAGCCTGGTGCACGCAGGCCCAGCAGCTGCAGGGGCCTC < 41bp 0.734676218516453 0.477394349769497 0.049334407 0.027187228 prediction 0.469352437032907 Functional Loss - LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113976752 chr13:113976753 . . 0 22 hm5C_associated_SNPs_72146 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:113976751-113976790
64251 chr17 79682526 79682526 1 + C T UCEC 79682524 + 79682504 79682544 41 CCAGATGACCTACTCCCTGACTCGGTTCGCCATCTACGAGA CCAGATGACCTACTCCCTGACTTGGTTCGCCATCTACGAGA < 41bp 0.813554850402897 0.578883067643783 0.0122538805 0.0066744685 prediction 0.469343565518229 Functional Loss - SLC25A10 ENSG00000183048;ENSG00000262660 CDS Human other chr17:79682524 chr17:79682526 nonsynonymous SNV 0.990 4 23 hm5C_associated_SNPs_72147 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:79682500-79682560
64251 chr7 100469281 100469281 1 + C T BLCA 100469279 + 100469259 100469299 41 GCGTGGTGTGTCACCGCGGCCTCGACGGCATCCCCTTCACA GCGTGGTGTGTCACCGCGGCCTTGACGGCATCCCCTTCACA < 41bp 0.835266435494922 0.600595268746695 0.1323176 0.037649244 prediction 0.469342333496454 Functional Loss - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100469279 chr7:100469281 synonymous SNV . 0 23 hm5C_associated_SNPs_72149 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:100469222-100469300
64251 chr16 2868924 2868924 1 + G A SKCM 2868921 + 2868901 2868941 41 TCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGAC TCCACATTTGAGTTTGAGAACCGAACAGACTGCTGGGTGAC < 41bp 0.742196350125021 0.507526689730375 0.8394458 0.5247735 prediction 0.469339320789292 Functional Loss - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2868921 chr16:2868924 synonymous SNV . 0 24 hm5C_associated_SNPs_72150 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:2868900-2868940
64251 chr14 70420220 70420220 1 + G T UCEC 70420217 + 70420197 70420237 41 CTCAGGAAGCTGTGTTTGTCCCAGAGTGTGGCGAGGATGGC CTCAGGAAGCTGTGTTTGTCCCATAGTGTGGCGAGGATGGC < 41bp 0.734664119580517 0.338767384659499 0.4323177 0.14900672 prediction 0.469328239161033 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70420217 chr14:70420220 stopgain 0.985 1 24 hm5C_associated_SNPs_72153 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr14:70420189-70420232
64251 chrX 73218813 73218813 1 + G A rs187606237 73218810 + 73218790 73218830 41 CTGGAGTGCAGTGGCGCAATCTCGGCTCTCTGCAACCTTCA CTGGAGTGCAGTGGCGCAATCTCAGCTCTCTGCAACCTTCA < 41bp 0.764997560378967 0.530342682201221 0.40647396 0.2559173 prediction 0.469309756355494 Functional Loss - JPX ENSG00000225470 ncRNA_exonic Human lincRNA chrX:73218810 chrX:73218813 . . 0 24 hm5C_associated_SNPs_72155 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:73218800-73218820
64251 chr17 79954502 79954502 1 + C T UCEC 79954500 + 79954480 79954520 41 AAGCAGAGCACAAGGGCACCCGCAGCTGCCCCCTTTGTTCC AAGCAGAGCACAAGGGCACCCGTAGCTGCCCCCTTTGTTCC < 41bp 0.78447956618951 0.549835717823695 0.05636549 0.10149762 prediction 0.46928769673163 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79954500 chr17:79954502 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_72161 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:79954495-79954534
64251 chr2 176981904 176981904 1 + A T LUAD 176981900 + 176981880 176981920 41 ATTAAGGAAGAATCCAATTGCTGCATGTATTCTGATAAGCG ATTAAGGAAGAATCCAATTGCTGCTTGTATTCTGATAAGCG < 41bp 0.734643387339278 0.391189639670267 0.16298509 0.03749475 prediction 0.469286774678556 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981900 chr2:176981904 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_72162 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176981860-176981960
64251 chr5 137803193 137803193 1 + C T CESC 137803191 + 137803171 137803211 41 TGTGATCGCCGCTTCTCCCGCTCCGACGAGCTCACCCGCCA TGTGATCGCCGCTTCTCCCGCTTCGACGAGCTCACCCGCCA < 41bp 0.73463963083949 0.47178057459039 0.13662606 0.09805253 prediction 0.46927926167898 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803191 chr5:137803193 nonsynonymous SNV 0.660 4 23 hm5C_associated_SNPs_72166 0 0 3 RBM15 POSTAR2 ENCODE chr5:137803161-137803209
64251 chr17 7466973 7466973 1 + C T SKCM 7466971 + 7466951 7466991 41 TGACTCCCCCCGGGGGCCACCTCCACCCCGGCTGGGTCTGC TGACTCCCCCCGGGGGCCACCTTCACCCCGGCTGGGTCTGC < 41bp 0.819308459166819 0.58467358101895 0.93821037 0.12045112 prediction 0.469269756295737 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466971 chr17:7466973 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_72167 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7466951-7466987
64251 chr15 41770792 41770792 1 + G A UCEC 41770789 + 41770769 41770809 41 CCAACAGATGGATCCCTTTACTCGGCGGCAGTGCAAGCCTA CCAACAGATGGATCCCTTTACTCAGCGGCAGTGCAAGCCTA < 41bp 0.747737266597395 0.51310387305413 0.47543877 0.14310724 prediction 0.469266787086532 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41770789 chr15:41770792 nonsynonymous SNV 0.852 3 24 hm5C_associated_SNPs_72168 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr15:41770775-41770796
64251 chr7 128444785 128444785 1 + C T COAD 128444783 + 128444763 128444803 41 CAGGAGAGCAACAGCAGCCTCACGGGGCAGCTTGCAGATCT CAGGAGAGCAACAGCAGCCTCATGGGGCAGCTTGCAGATCT < 41bp 0.824429463624175 0.589796184866285 0.90076435 0.89476 prediction 0.469266557515781 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128444783 chr7:128444785 nonsynonymous SNV 0.986 1 23 hm5C_associated_SNPs_72169 0 0 1 DDX24 POSTAR2 ENCODE chr7:128444741-128444787
64251 chr7 142563239 142563239 1 + G A LUSC 142563236 + 142563216 142563256 41 CTCTGCCTCCTCAGCCTGCCCACGGGGGCTCTATAAGTCTT CTCTGCCTCCTCAGCCTGCCCACAGGGGCTCTATAAGTCTT < 41bp 0.767082278667614 0.532453410078758 0.80234575 0.23358431 prediction 0.469257737177712 Functional Loss - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142563236 chr7:142563239 nonsynonymous SNV 0.106 0 24 hm5C_associated_SNPs_72170 0 0 1 SF3B4 POSTAR2 ENCODE chr7:142563159-142563242
64251 chr19 19168390 19168390 1 + G C LUSC 19168389 + 19168369 19168409 41 CGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTGGAC CGGGACCTGGGTTGTCATGTCCAGCTCCGAGAGCTGTGGAC < 41bp 0.73462815771244 0.431879535370783 0.57666314 0.30397564 prediction 0.469256315424881 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19168389 chr19:19168390 nonsynonymous SNV 0.014 2 22 hm5C_associated_SNPs_72171 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:19168377-19168394
64251 chr4 1244607 1244607 1 + G A COAD 1244604 + 1244584 1244624 41 GGGGAGGAATTCCTGGCTCCCGCGTGGACTTGCAGAGCTCA GGGGAGGAATTCCTGGCTCCCGCATGGACTTGCAGAGCTCA < 41bp 0.734622458188881 0.496433296133517 0.46285516 0.3974663 prediction 0.469244916377762 Functional Loss - CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1244604 chr4:1244607 . . 0 24 hm5C_associated_SNPs_72172 0 0 3 RBM15 POSTAR2 ENCODE chr4:1244585-1244616
64251 chr15 90744608 90744608 1 + G C rs528107056 90744604 + 90744584 90744624 41 AGCCGAGGCTGCGGGGCCGGCGCCGGCGGGAGGACTGCGGT AGCCGAGGCTGCGGGGCCGGCGCCCGCGGGAGGACTGCGGT < 41bp 0.734618041961612 0.439866296207062 0.88469154 0.5752262 prediction 0.469236083923224 Functional Loss - SEMA4B ENSG00000185033 UTR5 Human protein_coding chr15:90744604 chr15:90744608 . . 0 25 hm5C_associated_SNPs_72176 0 0 2 DDX3X POSTAR2 ENCODE chr15:90744583-90744642
64251 chrX 84520157 84520157 1 + C T SKCM 84520155 + 84520135 84520175 41 ATTGTCACAGAGAGTGAGTACACCAGTGGACATTCAGTAGC ATTGTCACAGAGAGTGAGTACATCAGTGGACATTCAGTAGC < 41bp 0.851132154260286 0.616515159209812 0.3293558 0.24757725 prediction 0.469233990100948 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84520155 chrX:84520157 nonsynonymous SNV 0.989 0 23 hm5C_associated_SNPs_72177 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:84520120-84520180
64251 chr13 52603174 52603174 1 + A C CHOL 52603170 + 52603150 52603190 41 GTCAGAGTTCAGTGTCAGTTCTGAAGGATCAGGAGAAAAGC GTCAGAGTTCAGTGTCAGTTCTGACGGATCAGGAGAAAAGC < 41bp 0.734613564421948 0.333644666168773 0.29796976 0.1729114 prediction 0.469227128843896 Functional Loss - UTP14C ENSG00000253797 CDS Human protein_coding chr13:52603170 chr13:52603174 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_72178 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:52603098-52603183
64251 chr12 4385251 4385251 1 + G A SKCM 4385248 + 4385228 4385268 41 GACCGTTTCTTGGCTGGGGTCCCGACTCCGAAGTCCCATCT GACCGTTTCTTGGCTGGGGTCCCAACTCCGAAGTCCCATCT < 41bp 0.753303100198113 0.518694201471866 0.13531101 0.18135962 prediction 0.469217797452494 Functional Loss - CCND2 ENSG00000118971 CDS Human protein_coding chr12:4385248 chr12:4385251 synonymous SNV . 0 24 hm5C_associated_SNPs_72180 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:4385225-4385251
64251 chr1 32670821 32670821 1 + C T COAD 32670819 + 32670799 32670839 41 AAGCTGCACCTGGCCGAGAACGCCGAGCCTGAGGAGCAGTC AAGCTGCACCTGGCCGAGAACGTCGAGCCTGAGGAGCAGTC < 41bp 0.801829199493965 0.567221682794012 0.7459388 0.4454698 prediction 0.469215033399906 Functional Loss - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32670819 chr1:32670821 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_72182 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32670799-32670832
64251 chr3 50223738 50223738 1 + G T LUAD 50223736 + 50223716 50223756 41 GGAGCCGCCGGCAGGACGTCCGGCACGGAAACCCCATCAGG GGAGCCGCCGGCAGGACGTCCGTCACGGAAACCCCATCAGG < 41bp 0.734602392082368 0.375174084692894 0.14454558 0.12071195 prediction 0.469204784164737 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50223736 chr3:50223738 synonymous SNV . 0 23 hm5C_associated_SNPs_72184 0 0 1 RBFOX2 POSTAR2 ENCODE chr3:50223563-50223738
64251 chr5 145834749 145834749 1 + C T UCEC 145834747 + 145834727 145834767 41 GCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTC GCGAGGCCCTCCTCCACCACCATGGCCGCCCTTTGGACGTC < 41bp 0.813105209646557 0.578529137431344 0.64793575 0.4129767 prediction 0.469152144430427 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145834747 chr5:145834749 nonsynonymous SNV 0.966 3 23 hm5C_associated_SNPs_72191 0 0 2 BUD13 POSTAR2 ENCODE chr5:145834723-145834751
64251 chr7 73588738 73588738 1 + G C ESCA 73588734 + 73588714 73588754 41 ATGGCGGACTTCGACACCTACGACGATCGGGCCTACAGCAG ATGGCGGACTTCGACACCTACGACCATCGGGCCTACAGCAG < 41bp 0.840031253769225 0.605459833627464 0.056311607 0.05287829 prediction 0.469142840283523 Functional Loss - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73588734 chr7:73588738 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_72196 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:73588714-73588761
64251 chr13 113803351 113803351 1 + G A BLCA 113803348 + 113803328 113803368 41 GACATCGCCGTGCTCCGGCTCAAGACCCCCATCACCTTCCG GACATCGCCGTGCTCCGGCTCAAAACCCCCATCACCTTCCG < 41bp 0.776617913354825 0.542052774994946 0.14138669 0.057137907 prediction 0.469130276719759 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803348 chr13:113803351 nonsynonymous SNV 0.962 3 24 hm5C_associated_SNPs_72197 0 0 1 RPS3 POSTAR2 ENCODE chr13:113803327-113803360
64251 chr6 43581996 43581996 1 + A C STAD 43581992 + 43581972 43582012 41 CTTCAGCTTCCAAATCTGTGCTGGAGGTGACTCAGAAAGCA CTTCAGCTTCCAAATCTGTGCTGGCGGTGACTCAGAAAGCA < 41bp 0.734558833610306 0.340277967945134 0.30717543 0.2457954 prediction 0.469117667220613 Functional Loss - POLH ENSG00000170734 CDS Human protein_coding chr6:43581992 chr6:43581996 nonsynonymous SNV 0.007 1 25 hm5C_associated_SNPs_72201 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:43581983-43582006
64251 chr20 56138663 56138663 1 + G A UCEC 56138660 + 56138640 56138680 41 CTGAGGGTGAGAAGAAGTACCTGGCGGCCGCATTTCCCAGC CTGAGGGTGAGAAGAAGTACCTGACGGCCGCATTTCCCAGC < 41bp 0.758079022149092 0.523522834760429 0.4888776 0.1469593 prediction 0.469112374777325 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56138660 chr20:56138663 nonsynonymous SNV 0.745 1 24 hm5C_associated_SNPs_72203 0 0 1 PPIG POSTAR2 ENCODE chr20:56138655-56138772
64251 chr3 133478078 133478078 1 + G A SKCM 133478075 + 133478055 133478095 41 AGTGGTGTGCGCTGAGCCACCACGAGAGGCTCAAGTGTGAT AGTGGTGTGCGCTGAGCCACCACAAGAGGCTCAAGTGTGAT < 41bp 0.754187422803328 0.519637725642096 0.43926015 0.30060768 prediction 0.469099394322464 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133478075 chr3:133478078 nonsynonymous SNV 0.011 4 24 hm5C_associated_SNPs_72204 0 0 6 DHX30 POSTAR2 ENCODE chr3:133478046-133478138
64251 chr9 4844532 4844532 1 + G T LUSC 4844530 + 4844510 4844550 41 CCTTTGTATCTCCAGGTCTCCGGGCTTTGGGTTGTCACTGG CCTTTGTATCTCCAGGTCTCCGTGCTTTGGGTTGTCACTGG < 41bp 0.734546620970637 0.389255974735326 0.9255779 0.17572832 prediction 0.469093241941274 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4844530 chr9:4844532 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_72208 0 0 3 BUD13 POSTAR2 ENCODE chr9:4844507-4844616
64251 chr17 42427072 42427072 1 + G A BLCA 42427069 + 42427049 42427089 41 GGATGGCCATCACTGCTGCCCACGGGGCTTCCACTGCAGTG GGATGGCCATCACTGCTGCCCACAGGGCTTCCACTGCAGTG < 41bp 0.782210788657784 0.547666323589682 0.41996622 0.16173062 prediction 0.469088930136204 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42427069 chr17:42427072 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_72209 0 0 5 RPS3 POSTAR2 ENCODE chr17:42427033-42427079
64251 chr8 87440008 87440008 1 + G T GBM 87440005 + 87439985 87440025 41 AATCTCAGCGGAACCAATTGCAGGGAGCTATGCAACAGTTT AATCTCAGCGGAACCAATTGCAGTGAGCTATGCAACAGTTT < 41bp 0.734543813873003 0.349636608140225 0.91111445 0.34025535 prediction 0.469087627746007 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87440005 chr8:87440008 stopgain 1.000 1 24 hm5C_associated_SNPs_72210 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:87439980-87440021
64251 chr2 216965176 216965176 1 + A T SARC 216965172 + 216965152 216965192 41 GGTCTGGAGGACTGTTCTCCCTACAGCATTGTGGAGTTGCT GGTCTGGAGGACTGTTCTCCCTACTGCATTGTGGAGTTGCT < 41bp 0.734532444169965 0.40818384733531 0.39518568 0.10266912 prediction 0.46906488833993 Functional Loss - TMEM169 ENSG00000163449 CDS Human protein_coding chr2:216965172 chr2:216965176 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_72216 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr2:216965153-216965177
64251 chr19 56170693 56170693 1 + G A UCEC 56170690 + 56170670 56170710 41 CCGGGACCAGCGGAGCGCCTCCCGGGACAGGCGACGACGCA CCGGGACCAGCGGAGCGCCTCCCAGGACAGGCGACGACGCA < 41bp 0.747858003748717 0.513325605651196 0.6930778 0.41629517 prediction 0.469064796195042 Functional Loss - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56170690 chr19:56170693 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_72217 0 0 2 SRSF1 POSTAR2 ENCODE chr19:56170585-56170707
64251 chr7 128845480 128845480 1 + G A CESC 128845477 + 128845457 128845497 41 TTCGTGGCTGACTGGCGGAACTCGAATCGCTACCCTGCTGT TTCGTGGCTGACTGGCGGAACTCAAATCGCTACCCTGCTGT < 41bp 0.734531101847307 0.484064215574167 0.85391736 0.39785683 prediction 0.469062203694615 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128845477 chr7:128845480 synonymous SNV . 0 24 hm5C_associated_SNPs_72218 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:128845455-128845480
64251 chr7 128845479 128845479 1 + C T STAD 128845477 + 128845457 128845497 41 TTCGTGGCTGACTGGCGGAACTCGAATCGCTACCCTGCTGT TTCGTGGCTGACTGGCGGAACTTGAATCGCTACCCTGCTGT < 41bp 0.734531101847307 0.439962818880161 0.85391736 0.44340673 prediction 0.469062203694615 Functional Loss - SMO ENSG00000128602 CDS Human protein_coding chr7:128845477 chr7:128845479 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_72219 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:128845455-128845480
64251 chr5 1816029 1816029 1 + A T LUAD 1816025 + 1816005 1816045 41 TCCAGTTCAGACAGCACCACCACTAGAGCGTGTGGCACGCC TCCAGTTCAGACAGCACCACCACTTGAGCGTGTGGCACGCC < 41bp 0.734528973651179 0.400259181443406 0.1741099 0.1403234 prediction 0.469057947302359 Functional Loss - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1816025 chr5:1816029 stoploss 0.193 0 25 hm5C_associated_SNPs_72223 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:1815971-1816030
64251 chr4 83839358 83839358 1 + C T LUSC 83839356 + 83839336 83839376 41 CATCTTTGACATTTCAATTGCTCGAAGGAAAGACTTGGCGC CATCTTTGACATTTCAATTGCTTGAAGGAAAGACTTGGCGC < 41bp 0.839767079748169 0.605238281288027 0.108374655 0.14529186 prediction 0.469057596920284 Functional Loss - THAP9 ENSG00000168152 CDS Human protein_coding chr4:83839356 chr4:83839358 stopgain 0.687 0 23 hm5C_associated_SNPs_72224 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:83839350-83839383
64251 chr19 10781760 10781760 1 + G A rs1802642 10781757 + 10781737 10781777 41 GTCCAGAACATGGTGTCCCACACGGAGCGGGCGCTCAAAGC GTCCAGAACATGGTGTCCCACACAGAGCGGGCGCTCAAAGC < 41bp 0.734519836923347 0.497574718224646 0.1386405 0.04628119 prediction 0.469039673846694 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10781757 chr19:10781760 synonymous SNV . 0 24 hm5C_associated_SNPs_72230 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10781751-10781776
64251 chrX 16860427 16860427 1 + C T rs779093005 16860425 + 16860405 16860445 41 CTTTTTGAAAACATTTATATCTCGGGACAAATTGAGATGGC CTTTTTGAAAACATTTATATCTTGGGACAAATTGAGATGGC < 41bp 0.784050833900539 0.549535312062239 0.1642676 0.23000485 prediction 0.469031043676598 Functional Loss - TXLNG ENSG00000086712 UTR3 Human protein_coding chrX:16860425 chrX:16860427 . . 0 23 hm5C_associated_SNPs_72231 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:16860404-16860438
64251 chr6 144179072 144179072 1 + G C LUSC 144179071 + 144179051 144179091 41 GGAAACAAAGAGTCGCTTCACGGAGTATTCGATGACTTCCT GGAAACAAAGAGTCGCTTCACCGAGTATTCGATGACTTCCT < 41bp 0.794677028542324 0.560172212602365 0.9064779 0.20276141 prediction 0.469009631879917 Functional Loss - LTV1 ENSG00000135521 CDS Human protein_coding chr6:144179071 chr6:144179072 synonymous SNV . 0 22 hm5C_associated_SNPs_72235 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:144179039-144179074
64251 chr19 52877654 52877654 1 + G T LUSC 52877652 + 52877632 52877672 41 ATAGCAAACAATCCAGGTGGCAGGGAGTGCATCAAAGGTGT ATAGCAAACAATCCAGGTGGCATGGAGTGCATCAAAGGTGT < 41bp 0.899505943408639 0.66500215597714 0.81084776 0.4701753 prediction 0.469007574862999 Functional Loss - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52877652 chr19:52877654 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_72237 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52877635-52877668
64251 chr15 40617124 40617124 1 + G C rs11540714 40617123 + 40617103 40617143 41 TTTAAGTAAGCTGAAGCTCTCGAAAGGAGGAGGGCACCAAA TTTAAGTAAGCTGAAGCTCTCCAAAGGAGGAGGGCACCAAA < 41bp 0.734483508077736 0.423939610617626 0.89921427 0.5796733 prediction 0.468967016155472 Functional Loss - INAFM2 ENSG00000259330 upstream Human protein_coding chr15:40617123 chr15:40617124 . . 0 22 hm5C_associated_SNPs_72246 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:40617073-40617125
64251 chr6 1610966 1610966 1 + G T LUSC 1610963 + 1610943 1610983 41 CCATGGCCATCCAGAACGCCCCGGACAAGAAGATCACCCTG CCATGGCCATCCAGAACGCCCCGTACAAGAAGATCACCCTG < 41bp 0.734478071016768 0.351168995806838 0.26421428 0.067062706 prediction 0.468956142033536 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1610963 chr6:1610966 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72249 0 0 18 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:1610925-1610982
64251 chr6 158483196 158483196 1 + G A GBM 158483193 + 158483173 158483213 41 AAAGGGGGAGAACGTCAGTCCACGGTGAGGCTCGCTGCGCA AAAGGGGGAGAACGTCAGTCCACAGTGAGGCTCGCTGCGCA < 41bp 0.766868379732723 0.532393503279654 0.2654583 0.060017496 prediction 0.468949752906139 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158483193 chr6:158483196 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_72250 0 0 3 DDX24 POSTAR2 ENCODE chr6:158483152-158483199
64251 chr8 19805748 19805748 1 + C T BRCA 19805746 + 19805726 19805766 41 GCCCTAAGGACCCCTGAAGACACAGCTGAGGACACTTGCCA GCCCTAAGGACCCCTGAAGACATAGCTGAGGACACTTGCCA < 41bp 0.734474711558932 0.453597330689907 0.06711155 0.06817514 prediction 0.468949423117865 Functional Loss - LPL ENSG00000175445 CDS Human protein_coding chr8:19805746 chr8:19805748 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_72251 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:19805744-19805776
64251 chr15 49170673 49170673 1 + G T UCEC 49170670 + 49170650 49170690 41 TTCGAGAGCGAGGACGAGGGCGAGGAATTTGATGACTGGGA TTCGAGAGCGAGGACGAGGGCGATGAATTTGATGACTGGGA < 41bp 0.919960147885561 0.685504695855913 0.73633283 0.3808345 prediction 0.468910904059296 Functional Loss - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170670 chr15:49170673 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_72258 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:49170635-49170673
64251 chr13 48937009 48937009 1 + G T LUSC 48937006 + 48936986 48937026 41 ACACCCAGGCGAGGTCAGAACAGGAGTGCACGGATAGCAAA ACACCCAGGCGAGGTCAGAACAGTAGTGCACGGATAGCAAA < 41bp 0.913566967306819 0.679116430272052 0.73837703 0.24470422 prediction 0.468901074069535 Functional Loss - RB1 ENSG00000139687 CDS Human protein_coding chr13:48937006 chr13:48937009 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_72260 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48936989-48937032
64251 chrX 208186 208186 1 + G A BLCA 208183 + 208163 208203 41 CAGGACACACTCACGGAAATCTCGGAGTGGCTGGAGCGGCA CAGGACACACTCACGGAAATCTCAGAGTGGCTGGAGCGGCA < 41bp 0.734444661444688 0.496783196621501 0.894356 0.41216102 prediction 0.468889322889376 Functional Loss - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:208183 chrX:208186 synonymous SNV . 0 24 hm5C_associated_SNPs_72262 0 0 2 PPIG POSTAR2 ENCODE chrX:208160-208226
64251 chr19 17883491 17883491 1 + G T SARC 17883489 + 17883469 17883509 41 AAGCAGAACATCGAGAACGTCAGCGTGGAGATGCTACTCAG AAGCAGAACATCGAGAACGTCATCGTGGAGATGCTACTCAG < 41bp 0.734443311358587 0.377808450023861 0.3809788 0.1757726 prediction 0.468886622717173 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17883489 chr19:17883491 nonsynonymous SNV 0.750 1 23 hm5C_associated_SNPs_72263 0 0 6 DDX24 POSTAR2 ENCODE chr19:17883477-17883552
64251 chr19 4155013 4155013 1 + G A GBM 4155010 + 4154990 4155030 41 AGCTGGGCGAGGGCTGGGGTCACGTCAAGGACCAGGTGAGG AGCTGGGCGAGGGCTGGGGTCACATCAAGGACCAGGTGAGG < 41bp 0.755430555824152 0.520989075001227 0.8125081 0.85871947 prediction 0.468882961645851 Functional Loss - CREB3L3 ENSG00000060566 CDS Human protein_coding chr19:4155010 chr19:4155013 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_72265 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:4154988-4155018
64251 chr21 44437080 44437080 1 + G A UCEC 44437077 + 44437057 44437097 41 GGAATTGTGGTGCCGGCGTCCGCGCTGCAGCAGGGAAACGT GGAATTGTGGTGCCGGCGTCCGCACTGCAGCAGGGAAACGT < 41bp 0.752655156132698 0.518214851742737 0.39918536 0.3226015 prediction 0.468880608779923 Functional Loss - PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44437077 chr21:44437080 synonymous SNV . 0 24 hm5C_associated_SNPs_72267 0 0 1 DDX24 POSTAR2 ENCODE chr21:44437041-44437108
64251 chr17 6023726 6023726 1 + G T CESC 6023723 + 6023703 6023743 41 CGGCTGCTGGTGGTGCACTACGAGGAGCTGCGGCGCAGCCT CGGCTGCTGGTGGTGCACTACGATGAGCTGCGGCGCAGCCT < 41bp 0.73443043157706 0.341823539701813 0.7587445 0.37264305 prediction 0.468860863154121 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023723 chr17:6023726 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_72271 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr17:6023717-6023752
64251 chr3 140785442 140785442 1 + G T STAD 140785439 + 140785419 140785459 41 GCGTGGCCTACCCGGCCTTTCTGGGGCCCGACGAGGCCTTT GCGTGGCCTACCCGGCCTTTCTGTGGCCCGACGAGGCCTTT < 41bp 0.925261265459466 0.690836157440123 0.89643955 0.16805363 prediction 0.468850216038686 Functional Loss - SPSB4 ENSG00000175093 CDS Human protein_coding chr3:140785439 chr3:140785442 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_72272 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr3:140785438-140785471
64251 chr15 91492571 91492571 1 + G A SKCM 91492568 + 91492548 91492588 41 CAAGCCAAGCTTCGTGCGGGCTCGGGTGAAGAAGCTGCTGG CAAGCCAAGCTTCGTGCGGGCTCAGGTGAAGAAGCTGCTGG < 41bp 0.750058130538057 0.515635841592956 0.24525422 0.13853022 prediction 0.468844577890203 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492568 chr15:91492571 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_72274 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr15:91492554-91492575
64251 chr18 72178078 72178078 1 + G A COAD 72178075 + 72178055 72178095 41 CTGTCAACGTCCGATTCTGCCTCGAAGGCATGGAGGAGTCA CTGTCAACGTCCGATTCTGCCTCAAAGGCATGGAGGAGTCA < 41bp 0.754703266005169 0.520286960569496 0.86414874 0.28107196 prediction 0.468832610871346 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72178075 chr18:72178078 nonsynonymous SNV 0.964 4 24 hm5C_associated_SNPs_72276 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:72178077-72178112
64251 chr1 46033769 46033769 1 + G T OV 46033766 + 46033746 46033786 41 TGGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGTCCAAC TGGTGGCTAAGGGGCTGGTGCAGTCGCTGGGCCTGTCCAAC < 41bp 0.734415498518969 0.323122073572894 0.6190002 0.355753 prediction 0.468830997037938 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033766 chr1:46033769 nonsynonymous SNV 0.018 1 24 hm5C_associated_SNPs_72277 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:46033742-46033771
64251 chr12 1889790 1889790 1 + C T STAD 1889788 + 1889768 1889808 41 CTGCCACTCAGAGGGGGTCTCTCGGCTCTTCTCTAAGTAAG CTGCCACTCAGAGGGGGTCTCTTGGCTCTTCTCTAAGTAAG < 41bp 0.734410192739713 0.455763564049105 0.0761784 0.04207468 prediction 0.468820385479427 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1889788 chr12:1889790 nonsynonymous SNV 0.937 2 23 hm5C_associated_SNPs_72281 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:1889707-1889795
64251 chr19 38573161 38573161 1 + G C LUSC 38573157 + 38573137 38573177 41 AGGGGGAGGCTGGGCGTTCCCCGGGGGAGGCCGACGAGGGC AGGGGGAGGCTGGGCGTTCCCCGGCGGAGGCCGACGAGGGC < 41bp 0.845516271287148 0.611109209585898 0.92318714 0.88481504 prediction 0.468814123402499 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573157 chr19:38573161 nonsynonymous SNV 0.090 0 25 hm5C_associated_SNPs_72282 0 0 1 EIF3H POSTAR2 ENCODE chr19:38573096-38573178
64251 chr14 35782182 35782182 1 + G T UCEC 35782180 + 35782160 35782200 41 TGGGTTTAAAGCCACTGCAGCGGGAGTTAAACAAACTGAGT TGGGTTTAAAGCCACTGCAGCGTGAGTTAAACAAACTGAGT < 41bp 0.734401697607511 0.401564019728906 0.8990768 0.24841776 prediction 0.468803395215022 Functional Loss - PSMA6 ENSG00000100902 CDS Human protein_coding chr14:35782180 chr14:35782182 stopgain 0.997 1 23 hm5C_associated_SNPs_72286 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chr14:35782131-35782184
64251 chr19 44352264 44352264 1 + G A READ 44352261 + 44352241 44352281 41 TTGTAGTGGGTATCAACTTACTCGACATCAGGTATTTCACA TTGTAGTGGGTATCAACTTACTCAACATCAGGTATTTCACA < 41bp 0.734400401548898 0.49864524712826 0.03058353 0.030931413 prediction 0.468800803097795 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352261 chr19:44352264 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_72288 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44352174-44352292
64251 chr19 44352263 44352263 1 + C T STAD 44352261 + 44352241 44352281 41 TTGTAGTGGGTATCAACTTACTCGACATCAGGTATTTCACA TTGTAGTGGGTATCAACTTACTTGACATCAGGTATTTCACA < 41bp 0.734400401548898 0.455689608932268 0.03058353 0.013286769 prediction 0.468800803097795 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352261 chr19:44352263 stopgain 0.003 0 23 hm5C_associated_SNPs_72289 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44352174-44352292
64251 chr17 34894046 34894046 1 + C T BLCA 34894044 + 34894024 34894064 41 AGTAAATGTAGAAGCAGTATCTCGAAGAATGGCAAATTTAG AGTAAATGTAGAAGCAGTATCTTGAAGAATGGCAAATTTAG < 41bp 0.828081162623658 0.593681220598016 0.7587616 0.07494661 prediction 0.468799884051284 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34894044 chr17:34894046 stopgain 1.000 1 23 hm5C_associated_SNPs_72290 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:34894014-34894051
64251 chrX 17768177 17768177 1 + G A UCEC 17768174 + 17768154 17768194 41 TAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGG TAATTCCCCGAGCAACCTTCCAAAGCCATCCTTTTGCATGG < 41bp 0.771867875699584 0.537471966975404 0.750118 0.33200037 prediction 0.468791817448361 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768174 chrX:17768177 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_72291 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr19 39964988 39964988 1 + G T GBM 39964986 + 39964966 39965006 41 CGCCAAGCCCAGCAGGCTACCAGAATACCCACTCCCCAGCC CGCCAAGCCCAGCAGGCTACCATAATACCCACTCCCCAGCC < 41bp 0.894804730690656 0.660412452032115 0.78133345 0.15914345 prediction 0.468784557317082 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39964986 chr19:39964988 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_72293 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:39964980-39965000
64251 chr22 50956610 50956610 1 + G A rs201367371 50956607 + 50956587 50956627 41 CGGAAGGATTTCAGGATGAACACGTGCGTTCCCCACCCCAG CGGAAGGATTTCAGGATGAACACATGCGTTCCCCACCCCAG < 41bp 0.734388096138202 0.485956418082772 0.4476383 0.17871091 prediction 0.468776192276404 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50956607 chr22:50956610 synonymous SNV . 0 24 hm5C_associated_SNPs_72295 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50956583-50956621
64251 chr17 45994280 45994280 1 + A C rs200972130 45994276 + 45994256 45994296 41 CGCGGACAACATCATCCAGGCAGGAAATAACCTGCTCATTG CGCGGACAACATCATCCAGGCAGGCAATAACCTGCTCATTG < 41bp 0.734385010237556 0.332987968137529 0.8424685 0.823082 prediction 0.468770020475112 Functional Loss - SP2 ENSG00000167182 CDS Human protein_coding chr17:45994276 chr17:45994280 synonymous SNV . 0 25 hm5C_associated_SNPs_72296 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:45994268-45994280
64251 chr14 29237048 29237048 1 + C T COAD 29237046 + 29237026 29237066 41 AAGCCGCCGTTCAGCTACAACGCGCTCATCATGATGGCCAT AAGCCGCCGTTCAGCTACAACGTGCTCATCATGATGGCCAT < 41bp 0.787286731509779 0.552904578261225 0.15420887 0.14717272 prediction 0.468764306497107 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237046 chr14:29237048 nonsynonymous SNV 0.990 4 23 hm5C_associated_SNPs_72297 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:29237046-29237082
64251 chr11 125479485 125479485 1 + G A UCEC 125479482 + 125479462 125479502 41 GCTCCTCGTCTTCATGTTTCCAGGTATGTGGCCTCGTGTTC GCTCCTCGTCTTCATGTTTCCAGATATGTGGCCTCGTGTTC < 41bp 0.740387339837479 0.506006684253755 0.6986986 0.84830844 prediction 0.468761311167448 Functional Loss - STT3A ENSG00000134910 splicing Human protein_coding chr11:125479482 chr11:125479485 . 0.967 0 24 hm5C_associated_SNPs_72298 0 0 6 IGF2BP1 POSTAR2 ENCODE chr11:125479460-125479485
64251 chr1 164529151 164529151 1 + G T rs192264696 164529148 + 164529128 164529168 41 CCAGCACTTGCAGGATGGGGCCGGAGGGACCGAGGGGGAGG CCAGCACTTGCAGGATGGGGCCGTAGGGACCGAGGGGGAGG < 41bp 0.734380296006202 0.366044724521374 0.9160414 0.8674903 prediction 0.468760592012405 Functional Loss - PBX1 ENSG00000185630 CDS Human protein_coding chr1:164529148 chr1:164529151 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_72299 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:164529135-164529159
64251 chr16 31120554 31120554 1 + G A UCEC 31120551 + 31120531 31120571 41 AAAGGAGCAAGACGATGATCCTGGCGTCGGTGCTGAGGAGC AAAGGAGCAAGACGATGATCCTGACGTCGGTGCTGAGGAGC < 41bp 0.734377364287993 0.482328522012449 0.9092731 0.84147495 prediction 0.468754728575986 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31120551 chr16:31120554 nonsynonymous SNV 0.488 0 24 hm5C_associated_SNPs_72301 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr16:31120507-31120565
64251 chr11 64135651 64135651 1 + G T LUAD 64135648 + 64135628 64135668 41 ATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCT ATTCTCTTTGACCACAACAACGCTGTGATGACCGATGGGCT < 41bp 0.734376345724438 0.32612574503851 0.83325166 0.11641517 prediction 0.468752691448875 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64135648 chr11:64135651 synonymous SNV . 0 24 hm5C_associated_SNPs_72302 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585669 chr11:64135637-64135669
64251 chr7 76026899 76026899 1 + G A COAD 76026896 + 76026876 76026916 41 TGCACACCCCAGCCCAGGCTCTGGCAGGCTGCCAGGCGGGG TGCACACCCCAGCCCAGGCTCTGACAGGCTGCCAGGCGGGG < 41bp 0.734372187079399 0.490406570771881 0.34718394 0.2506793 prediction 0.468744374158799 Functional Loss - SSC4D ENSG00000146700 CDS Human protein_coding chr7:76026896 chr7:76026899 synonymous SNV . 0 24 hm5C_associated_SNPs_72304 0 0 1 DDX3X POSTAR2 ENCODE chr7:76026866-76026931
64251 chr3 183906039 183906039 1 + G C STAD 183906035 + 183906015 183906055 41 TACTGAAGATGCTGGCCACCCGGAGTCTGCGGGTTCCAGCC TACTGAAGATGCTGGCCACCCGGACTCTGCGGGTTCCAGCC < 41bp 0.859138643832709 0.624792067352565 0.9062691 0.304285 prediction 0.468693152960289 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906035 chr3:183906039 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_72314 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183906010-183906039
64251 chr1 110173651 110173651 1 + C T UCEC 110173649 + 110173629 110173669 41 GGACCAATGTGCCAGACATCCGCGTGGGCTACCGCTACGAG GGACCAATGTGCCAGACATCCGTGTGGGCTACCGCTACGAG < 41bp 0.785076160537115 0.550732881732181 0.6515517 0.7338836 prediction 0.468686557609868 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110173649 chr1:110173651 synonymous SNV . 0 23 hm5C_associated_SNPs_72316 0 0 1 GRWD1 POSTAR2 ENCODE chr1:110173628-110173693
64251 chr7 889619 889619 1 + C T UCEC 889617 + 889597 889637 41 CACAGCCGCCCACTCGCAGTCGCCACGGCTGCCCGGTCGGG CACAGCCGCCCACTCGCAGTCGTCACGGCTGCCCGGTCGGG < 41bp 0.776248815578784 0.541906342301307 0.38577384 0.23223421 prediction 0.468684946554954 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:889617 chr7:889619 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_72317 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:889599-889632
64251 chr12 57894254 57894254 1 + G C KIRP 57894250 + 57894230 57894270 41 CTTCTGTGGCTATGAGGAGGCTCGGGGTGACCAGTGTGACA CTTCTGTGGCTATGAGGAGGCTCGCGGTGACCAGTGTGACA < 41bp 0.833087802498077 0.598751197489979 0.65686095 0.31706566 prediction 0.468673210016196 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57894250 chr12:57894254 synonymous SNV . 0 25 hm5C_associated_SNPs_72320 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr12:57894224-57894274
64251 chr8 43055943 43055943 1 + G A rs61743005 43055940 + 43055920 43055960 41 CCTTCCCCGGCGAGATGGCCCTCGGCCTGTGCCGCTGCTTC CCTTCCCCGGCGAGATGGCCCTCAGCCTGTGCCGCTGCTTC < 41bp 0.766686659259548 0.532351668921684 0.28375876 0.17643836 prediction 0.468669980675728 Functional Loss - HGSNAT ENSG00000165102 UTR3 Human protein_coding chr8:43055940 chr8:43055943 . . 0 24 hm5C_associated_SNPs_72321 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:43055933-43055961
64251 chr11 62554927 62554927 1 + C T LUAD 62554925 + 62554905 62554945 41 TGGCGCTGTCCTGGCTGCAGCGCGTCGAGCTTGCGCTCTTT TGGCGCTGTCCTGGCTGCAGCGTGTCGAGCTTGCGCTCTTT < 41bp 0.734330802519727 0.499884263222352 0.84501874 0.8043786 prediction 0.468661605039454 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62554925 chr11:62554927 synonymous SNV . 0 23 hm5C_associated_SNPs_72323 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:62554914-62554944
64251 chr15 23812084 23812084 1 + G T UCEC 23812082 + 23812062 23812102 41 TGGAGGAGGAGGAAGAGAAGCAGAAACTTATTCAGCAATAC TGGAGGAGGAGGAAGAGAAGCATAAACTTATTCAGCAATAC < 41bp 0.734329598014022 0.396201194129739 0.850165 0.224426 prediction 0.468659196028043 Functional Loss - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23812082 chr15:23812084 nonsynonymous SNV 0.961 2 23 hm5C_associated_SNPs_72325 0 0 3 GEMIN5 POSTAR2 ENCODE chr15:23812064-23812156
64251 chrX 65414953 65414953 1 + G A SKCM 65414950 + 65414930 65414970 41 CATTTTCCAGGGCCAGTGATCCGGGCTGAGGTGGGTGACAC CATTTTCCAGGGCCAGTGATCCGAGCTGAGGTGGGTGACAC < 41bp 0.734322152532266 0.492217883619612 0.9337542 0.92148566 prediction 0.468644305064531 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65414950 chrX:65414953 synonymous SNV . 0 24 hm5C_associated_SNPs_72328 0 0 8 BUD13 POSTAR2 ENCODE chrX:65414926-65414985
64251 chr20 62630972 62630972 1 + C T COAD 62630970 + 62630950 62630990 41 TCATAGTGATATCAAGAAGGCGCGACTGCTCCTCAAGTCTG TCATAGTGATATCAAGAAGGCGTGACTGCTCCTCAAGTCTG < 41bp 0.82858626972205 0.594265022472462 0.23814026 0.2275114 prediction 0.468642494499176 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62630970 chr20:62630972 stopgain 0.639 1 23 hm5C_associated_SNPs_72329 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr20:62630960-62630980
64251 chr3 14713457 14713457 1 + G A rs537977414 14713454 + 14713434 14713474 41 ACCTCCCTGTCGCCCCCATGCTCGGCTTCCTCACATTCAGG ACCTCCCTGTCGCCCCCATGCTCAGCTTCCTCACATTCAGG < 41bp 0.734315644743031 0.494599628343988 0.093308926 0.039246917 prediction 0.468631289486061 Functional Loss - CCDC174 ENSG00000154781 UTR3 Human protein_coding chr3:14713454 chr3:14713457 . . 0 24 hm5C_associated_SNPs_72333 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:14713431-14713463
64251 chr17 48172779 48172779 1 + A C rs7221362 48172778 + 48172758 48172798 41 GCCCGCGCGGGGACCACAACCAAAGTCGCGGCCGCCGCAGC GCCCGCGCGGGGACCACAACCCAAGTCGCGGCCGCCGCAGC < 41bp 0.769684450822627 0.535369635112902 0.9006678 0.75549066 prediction 0.46862963141945 Functional Loss - PDK2 ENSG00000005882 UTR5 Human protein_coding chr17:48172778 chr17:48172779 . . 0 22 hm5C_associated_SNPs_72334 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:48172779-48172780
64251 chr7 26411513 26411513 1 + A T LUSC 26411509 + 26411489 26411529 41 CTTACAGAGCCATCTGAATTCAGAAGACATTGAGGCGTGTG CTTACAGAGCCATCTGAATTCAGATGACATTGAGGCGTGTG < 41bp 0.876448841030786 0.642136205925554 0.39668933 0.57970494 prediction 0.468625270210464 Functional Loss - SNX10 ENSG00000086300 CDS Human protein_coding chr7:26411509 chr7:26411513 nonsynonymous SNV 0.981 1 25 hm5C_associated_SNPs_72336 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:26411512-26411539
64251 chr7 135263592 135263592 1 + G A SKCM 135263589 + 135263569 135263609 41 CTCACAGCTTTGGAAACTGCCTGGGCTCCAAGCCACTGTTA CTCACAGCTTTGGAAACTGCCTGAGCTCCAAGCCACTGTTA < 41bp 0.734310499613108 0.499934811688347 0.29101443 0.09769896 prediction 0.468620999226217 Functional Loss - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135263589 chr7:135263592 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_72339 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:135263581-135263604
64251 chr12 123342728 123342728 1 + C T BLCA 123342726 + 123342706 123342746 41 CGGGGCGCTGCTGCCGAGGCCGCGGGCATCCTGCAGGATGC CGGGGCGCTGCTGCCGAGGCCGTGGGCATCCTGCAGGATGC < 41bp 0.774321435104278 0.540016626642908 0.65154135 0.5362463 prediction 0.46860961692274 Functional Loss - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123342726 chr12:123342728 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_72345 0 0 2 BUD13 POSTAR2 ENCODE chr12:123342603-123342735
64251 chr6 44397572 44397572 1 + T C COAD 44397571 + 44397551 44397591 41 CAGTCAAGTTTTATATCTTCCTGGGCAGAGCCGCTACACAC CAGTCAAGTTTTATATCTTCCCGGGCAGAGCCGCTACACAC < 41bp 0.765632205168356 0.53133207850042 0.086055696 0.10610694 prediction 0.468600253335871 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44397571 chr6:44397572 synonymous SNV . 0 22 hm5C_associated_SNPs_72348 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44397527-44397600
64251 chr16 3713453 3713453 1 - C T THYM 3713456 - 3713436 3713476 41 GACATAGTCGTGGATCACTACAAGGAGGAGAAGTTTGAGGA GACATAGTCGTGGATCACTACAAAGAGGAGAAGTTTGAGGA < 41bp 0.756598961235997 0.522301993653072 0.8652618 0.49399292 prediction 0.468593935165851 Functional Loss - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3713456 chr16:3713453 synonymous SNV . 0 24 hm5C_associated_SNPs_72350 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:3713434-3713455
64251 chr11 63961765 63961765 1 + G T BLCA 63961763 + 63961743 63961783 41 ACGAGGCAAATAACCCTCAACTGAAAGAGGGTTTACAGAAT ACGAGGCAAATAACCCTCAACTTAAAGAGGGTTTACAGAAT < 41bp 0.734293220201727 0.40185045524506 0.28963593 0.11405009 prediction 0.468586440403453 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63961763 chr11:63961765 synonymous SNV . 0 23 hm5C_associated_SNPs_72353 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:63961735-63961765
64251 chr3 52727344 52727344 1 + G T UCEC 52727342 + 52727322 52727362 41 ACTGCTGTGGTCTGAGTGGACAGGGTAAGCTTTCTTTTCTG ACTGCTGTGGTCTGAGTGGACATGGTAAGCTTTCTTTTCTG < 41bp 0.740777279369459 0.506485241080519 0.8984808 0.23735094 prediction 0.468584076577879 Functional Loss - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52727342 chr3:52727344 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_72354 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:52727240-52727460
64251 chr10 15145328 15145328 1 + T C THCA 15145327 + 15145307 15145347 41 TTTCAAAATGGCTGCAGCTCCTCAAGCACCGGGGCGGGGAT TTTCAAAATGGCTGCAGCTCCCCAAGCACCGGGGCGGGGAT < 41bp 0.776874425156843 0.542587141687998 0.32743892 0.11550757 prediction 0.46857456693769 Functional Loss - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15145327 chr10:15145328 synonymous SNV . 0 22 hm5C_associated_SNPs_72357 0 0 1 SF3B1 POSTAR2 ENCODE chr10:15145322-15145348
64251 chr11 64082538 64082538 1 + G A UCEC 64082535 + 64082515 64082555 41 AGAGCGTGTGGATGGAGGTGCTGGTGCTGGGTGTGGCCCAG AGAGCGTGTGGATGGAGGTGCTGATGCTGGGTGTGGCCCAG < 41bp 0.734285358642133 0.483288026098251 0.45463476 0.40720117 prediction 0.468570717284267 Functional Loss - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64082535 chr11:64082538 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_72359 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:64082504-64082547
64251 chr20 34526910 34526910 1 + C T LUAD 34526908 + 34526888 34526928 41 TGGAGACGAGGGGCTCTGCCCTCGACGATGCGGTCAACCCC TGGAGACGAGGGGCTCTGCCCTTGACGATGCGGTCAACCCC < 41bp 0.854623857120645 0.620340187693754 0.42753947 0.14110819 prediction 0.468567338853783 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526908 chr20:34526910 synonymous SNV . 0 23 hm5C_associated_SNPs_72361 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34526905-34526928
64251 chr2 219292998 219292998 1 + G A LUAD 219292995 + 219292975 219293015 41 ACCGAGGGGATGTTTTCCTCCTGGACCTTGGGAAGCTTATC ACCGAGGGGATGTTTTCCTCCTGAACCTTGGGAAGCTTATC < 41bp 0.739736855958526 0.50546516835668 0.09677732 0.066452265 prediction 0.468543375203693 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292995 chr2:219292998 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_72366 0 0 5 GRWD1 POSTAR2 ENCODE chr2:219292959-219293060
64251 chr9 96860102 96860102 1 + C T SKCM 96860099 + 96860079 96860119 41 GACAATCGAGGCATGATTTTCTCCAATGAGCAACAGTTTGA GACAATCGAGGCATGATTTTCTCTAATGAGCAACAGTTTGA < 41bp 0.739035757551852 0.504771162351088 0.95657325 0.9344942 prediction 0.468529190401529 Functional Loss - PTPDC1 ENSG00000158079 CDS Human protein_coding chr9:96860099 chr9:96860102 synonymous SNV . 0 24 hm5C_associated_SNPs_72371 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr9:96860093-96860106
64251 chr20 43704660 43704660 1 + G A rs144896941 43704657 + 43704637 43704677 41 TACCAGGGACTCTCAGCAAACACGGGACTGTGTTCAGTCCA TACCAGGGACTCTCAGCAAACACAGGACTGTGTTCAGTCCA < 41bp 0.735624733545031 0.501366881233487 0.32547015 0.1886282 prediction 0.468515704623087 Functional Loss - STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43704657 chr20:43704660 . . 0 24 hm5C_associated_SNPs_72376 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:43704626-43704660
64251 chr8 87464813 87464813 1 + C T BRCA 87464811 + 87464791 87464831 41 AATGACAGAATGGCGTTTTTCTCGAGGAGTACAAGAACAGA AATGACAGAATGGCGTTTTTCTTGAGGAGTACAAGAACAGA < 41bp 0.854420684075953 0.620163549294675 0.18969044 0.040630728 prediction 0.468514269562555 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87464811 chr8:87464813 stopgain 1.000 1 23 hm5C_associated_SNPs_72377 0 0 1 SF3B1 POSTAR2 ENCODE chr8:87464808-87464848
64251 chr7 155251672 155251672 1 + G A rs80239010 155251669 + 155251649 155251689 41 GTGAGCTCGGACTCGGACAGCTCGCAAGCCGGCGCCAACCT GTGAGCTCGGACTCGGACAGCTCACAAGCCGGCGCCAACCT < 41bp 0.745550805425951 0.511294170770209 0.122831285 0.0729917 prediction 0.468513269311482 Functional Loss - EN2 ENSG00000164778 CDS Human protein_coding chr7:155251669 chr7:155251672 synonymous SNV . 0 24 hm5C_associated_SNPs_72379 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:155251664-155251709
64251 chr16 77227493 77227493 1 + G A LUAD 77227490 + 77227470 77227510 41 AGTAGCTCTGGAGGCCAGGGCGGGGACCCCAGTGATGAGGA AGTAGCTCTGGAGGCCAGGGCGGAGACCCCAGTGATGAGGA < 41bp 0.789462577348894 0.555210310825301 0.9072875 0.8992747 prediction 0.468504533047186 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77227490 chr16:77227493 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_72383 0 0 1 ZRANB2 POSTAR2 ENCODE chr16:77227466-77227604
64251 chr19 34972892 34972892 1 + A C rs12609305 34972888 + 34972868 34972908 41 GCGGGCCGGGCCATGCAGCGCTCCAGGGCGGGCGCGGACGA GCGGGCCGGGCCATGCAGCGCTCCCGGGCGGGCGCGGACGA < 41bp 0.909672526853874 0.675426612330864 0.87723887 0.34638065 prediction 0.468491829046019 Functional Loss - WTIP ENSG00000142279 CDS Human protein_coding chr19:34972888 chr19:34972892 synonymous SNV . 0 25 hm5C_associated_SNPs_72385 0 0 1 DDX3X POSTAR2 ENCODE chr19:34972824-34972923
64251 chr9 7165251 7165251 1 + T C LIHC 7165250 + 7165230 7165270 41 TTCTGCAGAGCCGAGACTGTCTGAAGCTGGGCCCACCTGCT TTCTGCAGAGCCGAGACTGTCCGAAGCTGGGCCCACCTGCT < 41bp 0.749294249685366 0.51504849953975 0.87605584 0.7497749 prediction 0.468491500291232 Functional Loss - KDM4C ENSG00000107077 CDS Human protein_coding chr9:7165250 chr9:7165251 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_72386 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:7165242-7165271
64251 chr12 100732507 100732507 1 + G T PRAD 100732505 + 100732485 100732525 41 CAATATGGGCTTTCAGACTTCAGGATTCAACATGCCCGTTA CAATATGGGCTTTCAGACTTCATGATTCAACATGCCCGTTA < 41bp 0.859453556520864 0.625212583778575 0.30728406 0.043501407 prediction 0.468481945484579 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100732505 chr12:100732507 stopgain 1.000 1 23 hm5C_associated_SNPs_72387 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:100732498-100732536
64251 chr19 41758777 41758777 1 + G A SARC 41758774 + 41758754 41758794 41 TCTGTTTCCAGGGTTCTGAACGAGAGAGCTTCCCAGCACCT TCTGTTTCCAGGGTTCTGAACGAAAGAGCTTCCCAGCACCT < 41bp 0.783850658136177 0.54961340065255 0.92218447 0.5105939 prediction 0.468474514967253 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41758774 chr19:41758777 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_72390 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:41758760-41758780
64251 chr18 73000169 73000169 1 + C T UCEC 73000167 + 73000147 73000187 41 ATCTCGAAGTTTACTGGGCTCTCCATGACCACCATCAGCCA ATCTCGAAGTTTACTGGGCTCTTCATGACCACCATCAGCCA < 41bp 0.7342306297121 0.447645072596716 0.94231176 0.024591565 prediction 0.468461259424199 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000167 chr18:73000169 nonsynonymous SNV 0.850 4 23 hm5C_associated_SNPs_72396 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:73000147-73000173
64251 chr7 64378018 64378018 1 + G T UCEC 64378016 + 64377996 64378036 41 CTCTGGAGGAGTGGCAATGCCTGGACACTTCACAGCAGAAT CTCTGGAGGAGTGGCAATGCCTTGACACTTCACAGCAGAAT < 41bp 0.756699826357204 0.52247454904263 0.073717445 0.035396487 prediction 0.468450554629149 Functional Loss - ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64378016 chr7:64378018 synonymous SNV . 0 23 hm5C_associated_SNPs_72400 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:64378003-64378038
64251 chr2 106497841 106497841 1 + C T UCEC 106497839 + 106497819 106497859 41 GATGCGTCCCCCACGCCCAGCACGGACGCCGAGTACCCCGC GATGCGTCCCCCACGCCCAGCATGGACGCCGAGTACCCCGC < 41bp 0.771671661010553 0.537446574232686 0.31563795 0.31004867 prediction 0.468450173555734 Functional Loss - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106497839 chr2:106497841 nonsynonymous SNV 0.982 2 23 hm5C_associated_SNPs_72401 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr2:106497838-106497864
64251 chr8 75263608 75263608 1 + T C LIHC 75263607 + 75263587 75263627 41 CCTTGGTTTATGCGTTTGAACTCAACTGGAGAAGTGCCTGT CCTTGGTTTATGCGTTTGAACCCAACTGGAGAAGTGCCTGT < 41bp 0.792627043715191 0.558416990380583 0.14313087 0.058199793 prediction 0.468420106669217 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75263607 chr8:75263608 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_72405 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:75263590-75263621
64251 chr19 17448961 17448961 1 + A C rs1864112 17448960 + 17448940 17448980 41 CCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCCCC CCACGCCCTCCGAATTCTCACCGCACCCCGAGACCTGCCCC < 41bp 0.816530989821329 0.582324412180794 0.42946076 0.24594042 prediction 0.468413155281071 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17448960 chr19:17448961 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_72407 1 0 1 GEMIN5 POSTAR2 ENCODE chr19:17448940-17449015
64251 chr5 129096286 129096286 1 + T C rs143028454 129096285 + 129096265 129096305 41 TTCCCTGCACACAAACCTCTCTGGACATCTGAAGGTACTCA TTCCCTGCACACAAACCTCTCCGGACATCTGAAGGTACTCA < 41bp 0.754617358467163 0.52041456926033 0.020003527 0.14445254 prediction 0.468405578413665 Functional Loss - KIAA1024L ENSG00000186367 CDS Human protein_coding chr5:129096285 chr5:129096286 synonymous SNV . 0 22 hm5C_associated_SNPs_72409 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:129096257-129096287
64251 chr4 74313258 74313258 1 + T C COAD 74313257 + 74313237 74313277 41 AATGCTGCAAACTGACCACGCTGGAACGTGGTCAATGTATA AATGCTGCAAACTGACCACGCCGGAACGTGGTCAATGTATA < 41bp 0.75458653566863 0.520385459957094 0.060171396 0.0458273 prediction 0.468402151423071 Functional Loss - AFP ENSG00000081051 CDS Human protein_coding chr4:74313257 chr4:74313258 nonsynonymous SNV 0.002 2 22 hm5C_associated_SNPs_72410 0 0 2 SND1 POSTAR2 ENCODE chr4:74313253-74313272
64251 chr2 179449491 179449491 1 + G T THCA 179449489 + 179449469 179449509 41 CCGGAAGATGTACTCCTGGCCTGGGATCAGCTTTCCAACCC CCGGAAGATGTACTCCTGGCCTTGGATCAGCTTTCCAACCC < 41bp 0.734177219482613 0.41578425151722 0.48373714 0.1181564 prediction 0.468354438965227 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179449489 chr2:179449491 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_72425 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:179449462-179449496
64251 chr16 69350235 69350235 1 + G A rs570971398 69350232 + 69350212 69350252 41 ATTTACGAAGCAAAGAGAAACACGGCAAGAAGCCAGTCAAA ATTTACGAAGCAAAGAGAAACACAGCAAGAAGCCAGTCAAA < 41bp 0.745435301825869 0.511263338266476 0.45473546 0.37539288 prediction 0.468343927118786 Functional Loss - VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69350232 chr16:69350235 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_72426 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:69350168-69350238
64251 chr17 78971093 78971093 1 + T C STAD 78971092 + 78971072 78971112 41 GCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCA GCTCCTGGCAGGAAGCTTCACCCAGGAGGATGAAGACGCCA < 41bp 0.734167767974453 0.483584400111475 0.017891139 0.029663593 prediction 0.468335535948907 Functional Loss - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78971092 chr17:78971093 synonymous SNV . 0 22 hm5C_associated_SNPs_72428 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78971089-78971128
64251 chr9 110084309 110084309 1 + C T GBM 110084307 + 110084287 110084327 41 TCAGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGG TCAGGCTGTGGTTGACCCCCCTTAAGCAGCTAGTACTGGGG < 41bp 0.734166391269376 0.440012437620785 0.19164038 0.09809998 prediction 0.468332782538752 Functional Loss - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110084307 chr9:110084309 stopgain 0.819 0 23 hm5C_associated_SNPs_72429 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:110084268-110084309
64251 chr16 56862949 56862949 1 + G T LUSC 56862946 + 56862926 56862966 41 TTGCATCAGGCCCAGCTGGGCGGGGTGCCTGGGACTTACCA TTGCATCAGGCCCAGCTGGGCGGTGTGCCTGGGACTTACCA < 41bp 0.734162142370245 0.33192630249674 0.9296591 0.2590826 prediction 0.468324284740491 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56862946 chr16:56862949 synonymous SNV . 0 24 hm5C_associated_SNPs_72432 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:56862940-56862954
64251 chr11 608811 608811 1 + C T BLCA 608809 + 608789 608829 41 AAGGAGATCAGCGTCCAGACCTCGGGGAAGGGAGTGCTCCC AAGGAGATCAGCGTCCAGACCTTGGGGAAGGGAGTGCTCCC < 41bp 0.734156072760543 0.474629963053175 0.41938758 0.4253533 prediction 0.468312145521086 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608809 chr11:608811 nonsynonymous SNV 0.012 1 23 hm5C_associated_SNPs_72435 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr11:608810-608811
64251 chr3 141464912 141464912 1 + G A rs375149297 141464909 + 141464889 141464929 41 ACTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCC ACTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCC < 41bp 0.734148232629946 0.497939355354128 0.08403185 0.07050556 prediction 0.468296465259892 Functional Loss - RNF7 ENSG00000114125 UTR3 Human protein_coding chr3:141464909 chr3:141464912 . . 0 24 hm5C_associated_SNPs_72437 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:141464882-141464913
64251 chr17 70120341 70120341 1 + C T HNSC 70120339 + 70120319 70120359 41 GACTACACCGACCACCAGAACTCCAGCTCCTACTACAGCCA GACTACACCGACCACCAGAACTTCAGCTCCTACTACAGCCA < 41bp 0.734135190127247 0.447814833723978 0.40047407 0.07279518 prediction 0.468270380254493 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70120339 chr17:70120341 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_72441 0 0 7 IGF2BP1 POSTAR2 ENCODE chr17:70120251-70120405
64251 chr11 111866190 111866190 1 + G A SKCM 111866187 + 111866167 111866207 41 TGCGCAACAGCTTCAGTGGCCACGATCCTCAGCACCACACT TGCGCAACAGCTTCAGTGGCCACAATCCTCAGCACCACACT < 41bp 0.747224031320222 0.513090162969856 0.10830802 0.073768824 prediction 0.468267736700732 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111866187 chr11:111866190 nonsynonymous SNV 0.956 3 24 hm5C_associated_SNPs_72442 0 0 1 PPIG POSTAR2 ENCODE chr11:111866190-111866286
64251 chr16 27640151 27640151 1 + G T LUAD 27640148 + 27640128 27640168 41 CCTCCCACACGGAGGGGACACACGGTGAGCACAGGCCCTCC CCTCCCACACGGAGGGGACACACTGTGAGCACAGGCCCTCC < 41bp 0.734130611050169 0.340163979119516 0.25834692 0.051138908 prediction 0.468261222100338 Functional Loss - KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27640148 chr16:27640151 nonsynonymous SNV 0.389 2 24 hm5C_associated_SNPs_72443 0 0 2 PPIG POSTAR2 ENCODE chr16:27640110-27640154
64251 chr11 67258438 67258438 1 + C T CESC 67258436 + 67258416 67258456 41 GAAGGACGAAGAGGACAAAGCCCGGTTCCGGGGGATCTTCT GAAGGACGAAGAGGACAAAGCCTGGTTCCGGGGGATCTTCT < 41bp 0.734123037442535 0.485622296848443 0.21196169 0.1562052 prediction 0.46824607488507 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67258436 chr11:67258438 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_72445 0 0 1 LARP4 POSTAR2 ENCODE chr11:67258417-67258554
64251 chr12 100784797 100784797 1 + G C LUSC 100784793 + 100784773 100784813 41 TTCCAGACAGCACAGTTTAACTGGGATCCAGAAACAGTGGG TTCCAGACAGCACAGTTTAACTGGCATCCAGAAACAGTGGG < 41bp 0.73412025501871 0.453039357423397 0.39141035 0.28252375 prediction 0.468240510037419 Functional Loss - SLC17A8 ENSG00000179520 CDS Human protein_coding chr12:100784793 chr12:100784797 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_72447 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:100784785-100784807
64251 chr4 57871482 57871482 1 + G T UCEC 57871479 + 57871459 57871499 41 TGCACTAAATTTCATTGGTTCAAGAGGAGCAAAGCCTGGTG TGCACTAAATTTCATTGGTTCAATAGGAGCAAAGCCTGGTG < 41bp 0.734114844497161 0.356166236352781 0.8431011 0.2012972 prediction 0.468229688994322 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57871479 chr4:57871482 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72450 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:57871452-57871533
64251 chr12 132397757 132397757 1 + G T THYM 132397755 + 132397735 132397775 41 CCCTGCAGGTGACCTGGTGGCTGAGGCGCCCAGTGCCAAAC CCCTGCAGGTGACCTGGTGGCTTAGGCGCCCAGTGCCAAAC < 41bp 0.734112948425078 0.372556362135096 0.41231915 0.13978982 prediction 0.468225896850157 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132397755 chr12:132397757 stopgain 0.244 1 23 hm5C_associated_SNPs_72451 0 0 2 DDX24 POSTAR2 ENCODE chr12:132397740-132397795
64251 chr6 52268953 52268953 1 + C T PAAD 52268951 + 52268931 52268971 41 GGCAGGAGATCTTCCTGCAGCGCCATGGACCCCTATCTGTC GGCAGGAGATCTTCCTGCAGCGTCATGGACCCCTATCTGTC < 41bp 0.823460088871892 0.589358802063928 0.405994 0.41030812 prediction 0.468202573615927 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268951 chr6:52268953 synonymous SNV . 0 23 hm5C_associated_SNPs_72458 0 0 2 IGF2BP2 POSTAR2 ENCODE chr6:52268889-52268981
64251 chr6 27777859 27777859 1 + G A TGCT 27777856 + 27777836 27777876 41 ATCTAGCTCTGAAGGCATGGCGCGTACGAAGCAGACTGCTC ATCTAGCTCTGAAGGCATGGCGCATACGAAGCAGACTGCTC < 41bp 0.734099957226706 0.496644089731076 0.30553728 0.12549806 prediction 0.468199914453411 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27777856 chr6:27777859 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_72459 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27777830-27777874
64251 chr14 93278058 93278058 1 + G T CESC 93278055 + 93278035 93278075 41 TGAACTTGGAGTCCTCTAAGCAGGAATTAATTGACTACAAG TGAACTTGGAGTCCTCTAAGCAGTAATTAATTGACTACAAG < 41bp 0.734094208076538 0.365862683979555 0.9038985 0.3545329 prediction 0.468188416153077 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93278055 chr14:93278058 stopgain 1.000 1 24 hm5C_associated_SNPs_72464 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93278030-93278074
64251 chr15 40764358 40764358 1 + C T BLCA 40764356 + 40764336 40764376 41 GGTGCTGGAGTGGGTACGGGCACCACCTCACGTCCGATTTC GGTGCTGGAGTGGGTACGGGCATCACCTCACGTCCGATTTC < 41bp 0.792579935666362 0.558487667194973 0.07525954 0.18993685 prediction 0.468184536942777 Functional Loss - CHST14 ENSG00000169105 CDS Human protein_coding chr15:40764356 chr15:40764358 nonsynonymous SNV 0.883 1 23 hm5C_associated_SNPs_72467 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:40764349-40764379
64251 chr19 34832986 34832986 1 + G A LGG 34832983 + 34832963 34833003 41 CACACCTCTGACACCCCAGCCGGGACTGGCACCTCAGCAGC CACACCTCTGACACCCCAGCCGGAACTGGCACCTCAGCAGC < 41bp 0.785096745892805 0.55101089105895 0.89823365 0.7834035 prediction 0.468171709667709 Functional Loss - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832983 chr19:34832986 nonsynonymous SNV 0.105 2 24 hm5C_associated_SNPs_72470 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:34832900-34832998
64251 chr14 23946717 23946717 1 + G T UCEC 23946715 + 23946695 23946735 41 TCTCCATCTGTCTCCAGGATCAGAATCCTATTAAGAAGCGG TCTCCATCTGTCTCCAGGATCATAATCCTATTAAGAAGCGG < 41bp 0.734079848479708 0.403276852896184 0.31928265 0.1699189 prediction 0.468159696959417 Functional Loss - NGDN ENSG00000129460 CDS Human protein_coding chr14:23946715 chr14:23946717 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_72472 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:23946677-23946750
64251 chr1 87805770 87805770 1 + G T SKCM 87805767 + 87805747 87805787 41 CTGCCGGAATCGCCTGGTCCCGGGAGATCGGTTTCACTACA CTGCCGGAATCGCCTGGTCCCGGTAGATCGGTTTCACTACA < 41bp 0.919098394963467 0.685028287421469 0.9404409 0.4955473 prediction 0.468140215083998 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805767 chr1:87805770 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_72475 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr3 178927439 178927439 1 + G A UCEC 178927436 + 178927416 178927456 41 TCCTGATCTTCCTCGTGCTGCTCGACTTTGCCTTTCCATTT TCCTGATCTTCCTCGTGCTGCTCAACTTTGCCTTTCCATTT < 41bp 0.737335645387651 0.503273881788555 0.008788258 0.0099154115 prediction 0.468123527198192 Functional Loss - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178927436 chr3:178927439 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_72480 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:178927406-178927453
64251 chr16 29852988 29852988 1 + C T rs144709938 29852986 + 29852966 29853006 41 TGTGGGAGAAAGAGCTGCCTCCCGGGGTGGAGGAGCTGCTG TGTGGGAGAAAGAGCTGCCTCCTGGGGTGGAGGAGCTGCTG < 41bp 0.813979462696881 0.579918303103221 0.26190597 0.32230806 prediction 0.468122319187319 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29852986 chr16:29852988 synonymous SNV . 0 23 hm5C_associated_SNPs_72481 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29852973-29853004
64251 chr6 54735158 54735158 1 + C T UCEC 54735156 + 54735136 54735176 41 CCATTGATATTCTGATTGAACACGGGTTAGAAGCATACCAA CCATTGATATTCTGATTGAACATGGGTTAGAAGCATACCAA < 41bp 0.812845721442832 0.578793190599643 0.2577198 0.18148625 prediction 0.468105061686378 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54735156 chr6:54735158 synonymous SNV . 0 23 hm5C_associated_SNPs_72484 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:54735148-54735162
64251 chr19 18499616 18499616 1 + C T STAD 18499614 + 18499594 18499634 41 CGAGCCTGCACCGCCTGAAGCCCGACACGGTGCCAGCGCCC CGAGCCTGCACCGCCTGAAGCCTGACACGGTGCCAGCGCCC < 41bp 0.780557099118508 0.546512429571039 0.08963731 0.062125415 prediction 0.468089339094938 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499614 chr19:18499616 synonymous SNV . 0 23 hm5C_associated_SNPs_72487 0 0 9 FMR1 POSTAR2 ENCODE chr19:18499600-18499655
64251 chr17 2937014 2937014 1 + G T rs374512836 2937012 + 2936992 2937032 41 TGGGGGGAGCTCAGCAGTGACTGGGGAGCTGGTCTGCCTCA TGGGGGGAGCTCAGCAGTGACTTGGGAGCTGGTCTGCCTCA < 41bp 0.73403830110926 0.432220807880831 0.8900467 0.63726765 prediction 0.468076602218521 Functional Loss - RAP1GAP2 ENSG00000132359 UTR3 Human protein_coding chr17:2937012 chr17:2937014 . . 0 23 hm5C_associated_SNPs_72489 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:2936972-2937065
64251 chr2 235951492 235951492 1 + C T SKCM 235951490 + 235951470 235951510 41 TCAGCGAGGAGCGGGTCAGGCTCCGGGGCCAGCTGTGGACC TCAGCGAGGAGCGGGTCAGGCTTCGGGGCCAGCTGTGGACC < 41bp 0.822815153966391 0.588811940824615 0.3652767 0.2847279 prediction 0.468006426283552 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235951490 chr2:235951492 synonymous SNV . 0 23 hm5C_associated_SNPs_72506 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:235951454-235951492
64251 chr19 11031515 11031515 1 + C T COAD 11031513 + 11031493 11031533 41 CTCTGTCTCTGCCATAGATACACGGGCACAACGCCCTCACC CTCTGTCTCTGCCATAGATACATGGGCACAACGCCCTCACC < 41bp 0.760632673301757 0.526633850198956 0.37317494 0.35009485 prediction 0.467997646205603 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11031513 chr19:11031515 nonsynonymous SNV 0.376 3 23 hm5C_associated_SNPs_72508 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:11031500-11031520
64251 chrX 129058886 129058886 1 + G A BLCA 129058883 + 129058863 129058903 41 GAGGGGACTATTCCCCAGGTCCAGAGAGAGGAACCTGCCCC GAGGGGACTATTCCCCAGGTCCAAAGAGAGGAACCTGCCCC < 41bp 0.733998717108642 0.484499988971548 0.32849807 0.08079368 prediction 0.467997434217285 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129058883 chrX:129058886 synonymous SNV . 0 24 hm5C_associated_SNPs_72509 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:129058863-129058886
64251 chr13 115090131 115090131 1 + C T UCEC 115090129 + 115090109 115090149 41 TCCAGAATCTCGGAAGTCAGCCCGGACTACCTCCCCTGAGC TCCAGAATCTCGGAAGTCAGCCTGGACTACCTCCCCTGAGC < 41bp 0.786756462139937 0.552759191601856 0.9223771 0.8945087 prediction 0.467994541076163 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090129 chr13:115090131 nonsynonymous SNV 0.973 2 23 hm5C_associated_SNPs_72511 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:115090069-115090146
64251 chr12 100728014 100728014 1 + A T LUAD 100728010 + 100727990 100728030 41 AGTCTGAACATAAGACTAAACTGGAGCAACTTCATATAATG AGTCTGAACATAAGACTAAACTGGTGCAACTTCATATAATG < 41bp 0.878832799062007 0.644836208139246 0.02767101 0.03848636 prediction 0.467993181845522 Functional Loss - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100728010 chr12:100728014 nonsynonymous SNV 0.962 4 25 hm5C_associated_SNPs_72512 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:100727994-100728020
64251 chr19 46020999 46020999 1 + G T PRAD 46020996 + 46020976 46021016 41 AAGCGATGGCTCCCTGCTGGCACGGGTCCCCAGGCCTTCAG AAGCGATGGCTCCCTGCTGGCACTGGTCCCCAGGCCTTCAG < 41bp 0.92341366976648 0.689431590807177 0.51003635 0.11453283 prediction 0.467964157918607 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46020996 chr19:46020999 synonymous SNV . 0 24 hm5C_associated_SNPs_72521 0 0 1 METAP2 POSTAR2 ENCODE chr19:46020931-46021010
64251 chr22 32211195 32211195 1 + C T UCEC 32211193 + 32211173 32211213 41 CTCCTTGGGATACACCAGCACTCGAGGTAAGAGTGCTGAAG CTCCTTGGGATACACCAGCACTTGAGGTAAGAGTGCTGAAG < 41bp 0.733971686600349 0.465855587376375 0.40055126 0.35263252 prediction 0.467943373200697 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32211193 chr22:32211195 stopgain 0.997 1 23 hm5C_associated_SNPs_72524 1 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:32211169-32211196
64251 chr1 3546247 3546247 1 + A T rs192366199 3546243 + 3546223 3546263 41 GTTGCAGTGAGCTGAGATGGCACCACTTATTGCACTCCAGC GTTGCAGTGAGCTGAGATGGCACCTCTTATTGCACTCCAGC < 41bp 0.834750766360984 0.600781248002548 0.4375812 0.60865724 prediction 0.467939036716872 Functional Loss - TPRG1L ENSG00000158109 UTR3 Human protein_coding chr1:3546243 chr1:3546247 . . 0 25 hm5C_associated_SNPs_72526 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:3546229-3546254
64251 chr18 63477081 63477081 1 + T C LUSC 63477080 + 63477060 63477100 41 GATCGTGAGGAGCAGGCCTACTACACGCTCCGAGCTCAAGC GATCGTGAGGAGCAGGCCTACCACACGCTCCGAGCTCAAGC < 41bp 0.733954626209968 0.459079653753345 0.5880215 0.25234824 prediction 0.467909252419936 Functional Loss - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63477080 chr18:63477081 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_72538 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:63477072-63477099
64251 chr1 27675935 27675935 1 + G A rs34639587 27675932 + 27675912 27675952 41 GTCTGTGCCGAGGAGGCTGACCCGGAGCTGGAGCCCGCGTC GTCTGTGCCGAGGAGGCTGACCCAGAGCTGGAGCCCGCGTC < 41bp 0.733951237615589 0.487757421573331 0.7881415 0.7089032 prediction 0.467902475231179 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27675932 chr1:27675935 synonymous SNV . 0 24 hm5C_associated_SNPs_72540 0 0 6 GRWD1 POSTAR2 ENCODE chr1:27675915-27675988
64251 chr2 27560185 27560185 1 - C A LUSC 27560187 - 27560167 27560207 41 AGGCCGCTCCCTACCTGCCCCAGGAGGAGAAGTCTCCATTG AGGCCGCTCCCTACCTGCCCCATGAGGAGAAGTCTCCATTG < 41bp 0.900871990849595 0.666924158880065 0.9077269 0.061101317 prediction 0.46789566393906 Functional Loss - GTF3C2 ENSG00000115207 CDS Human protein_coding chr2:27560187 chr2:27560185 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_72541 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27560137-27560186
64251 chr10 8006409 8006409 1 + T C STAD 8006408 + 8006388 8006428 41 ATCCAAAGAAAAGAAATCACCTGGACGTTCCAAGAGCCCCA ATCCAAAGAAAAGAAATCACCCGGACGTTCCAAGAGCCCCA < 41bp 0.773102245333712 0.539155158784002 0.38706747 0.43792397 prediction 0.46789417309942 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006408 chr10:8006409 synonymous SNV . 0 22 hm5C_associated_SNPs_72542 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:8006401-8006427
64251 chr4 41984211 41984211 1 + G A LGG 41984208 + 41984188 41984228 41 GTGAAGTCCCTGTGCTGGGCCTCGCTGAACCAGTTGGACTC GTGAAGTCCCTGTGCTGGGCCTCACTGAACCAGTTGGACTC < 41bp 0.736218253462375 0.502282148057578 0.13461542 0.03782302 prediction 0.467872210809594 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984208 chr4:41984211 synonymous SNV . 0 24 hm5C_associated_SNPs_72546 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:41984201-41984247
64251 chr7 98985759 98985759 1 + G A COAD 98985756 + 98985736 98985776 41 AAGGGCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGAT AAGGGCCGCACATGGAAGCCCACACTGGTCATCCTGCGGAT < 41bp 0.733933824716555 0.481585221985088 0.11587012 0.068104565 prediction 0.46786764943311 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985756 chr7:98985759 synonymous SNV . 0 24 hm5C_associated_SNPs_72548 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985750-98985774
64251 chr1 209849155 209849155 1 + G A BRCA 209849152 + 209849132 209849172 41 CTCTTCGGCGTGGTGCTCGGCCTGATGGAGACTGTGTGCAG CTCTTCGGCGTGGTGCTCGGCCTAATGGAGACTGTGTGCAG < 41bp 0.74141019289896 0.50748247796747 0.18669021 0.17686057 prediction 0.467855429862981 Functional Loss - G0S2 ENSG00000123689 CDS Human protein_coding chr1:209849152 chr1:209849155 synonymous SNV . 0 24 hm5C_associated_SNPs_72553 0 0 3 RBM15 POSTAR2 ENCODE chr1:209849149-209849192
64251 chr14 76905887 76905887 1 + G A READ 76905884 + 76905864 76905904 41 GGACTCGCCACCCATGTTTGCAGGCGCCGGGCTGGGAGGCA GGACTCGCCACCCATGTTTGCAGACGCCGGGCTGGGAGGCA < 41bp 0.733920475538513 0.485844151478219 0.9030687 0.6854241 prediction 0.467840951077027 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76905884 chr14:76905887 nonsynonymous SNV 0.702 2 24 hm5C_associated_SNPs_72556 0 0 1 RBM15 POSTAR2 ENCODE chr14:76905880-76905923
64251 chr16 29848061 29848061 1 + G A PRAD 29848058 + 29848038 29848078 41 TGCAGACAGCCCTGCACCTCCGGGCTCGGCGGAACTTCCGG TGCAGACAGCCCTGCACCTCCGGACTCGGCGGAACTTCCGG < 41bp 0.733919093007621 0.486087195265304 0.8804436 0.74227315 prediction 0.467838186015242 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29848058 chr16:29848061 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_72557 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29848042-29848077
64251 chr10 45499485 45499485 1 + C T SKCM 45499483 + 45499463 45499503 41 GAAGGAAGTCTGTGGCTGGTCTCCGTTAAGTATAGGGCTTT GAAGGAAGTCTGTGGCTGGTCTTCGTTAAGTATAGGGCTTT < 41bp 0.733918435983201 0.4586557979102 0.02642721 0.030879617 prediction 0.467836871966403 Functional Loss - ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45499483 chr10:45499485 synonymous SNV . 0 23 hm5C_associated_SNPs_72558 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr10:45499457-45499489
64251 chr19 11141565 11141565 1 + A C COAD 11141564 + 11141544 11141584 41 TTGACAGCGACTGGAATCCTCACCAGGTAAAAGCGGGCCGG TTGACAGCGACTGGAATCCTCCCCAGGTAAAAGCGGGCCGG < 41bp 0.733914396173093 0.488670630865751 0.19836405 0.08644655 prediction 0.467828792346186 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141564 chr19:11141565 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_72560 0 0 17 AARS POSTAR2 ENCODE chr19:11141543-11141576
64251 chr20 61929342 61929342 1 + G A PRAD 61929339 + 61929319 61929359 41 GAGAGTCGGAGGGGAGCGGCCTCGGCTACCTGGTGCAGGTG GAGAGTCGGAGGGGAGCGGCCTCAGCTACCTGGTGCAGGTG < 41bp 0.755921316705872 0.522011212183521 0.8404633 0.5845717 prediction 0.467820209044702 Functional Loss - COL20A1 ENSG00000101203 CDS Human protein_coding chr20:61929339 chr20:61929342 nonsynonymous SNV 0.046 3 24 hm5C_associated_SNPs_72563 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:61929312-61929345
64251 chr6 148841012 148841012 1 + G A rs149965187 148841009 + 148840989 148841029 41 AGGGGGAGATGAAGAAGGGTCTCGGGTCCCTAAGCCACGGG AGGGGGAGATGAAGAAGGGTCTCAGGTCCCTAAGCCACGGG < 41bp 0.767904437332486 0.533994603220888 0.6395493 0.5487416 prediction 0.467819668223197 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148841009 chr6:148841012 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_72565 0 0 2 EFTUD2 POSTAR2 ENCODE chr6:148841011-148841079
64251 chr19 50099342 50099342 1 + G T LGG 50099340 + 50099320 50099360 41 TCCACCTGGAGTCGGCTCTCCAGGAGCCCCTGGCAAATACC TCCACCTGGAGTCGGCTCTCCATGAGCCCCTGGCAAATACC < 41bp 0.733908132446003 0.379302123823091 0.91171926 0.20243815 prediction 0.467816264892006 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099340 chr19:50099342 stopgain 0.978 0 23 hm5C_associated_SNPs_72566 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:50099342-50099343
64251 chr16 30997010 30997010 1 + G A UCEC 30997007 + 30996987 30997027 41 ACTCTGCACAGGCCCAGAAGCTGGTGTACCTGGTCACAGGG ACTCTGCACAGGCCCAGAAGCTGATGTACCTGGTCACAGGG < 41bp 0.769252881692052 0.53535051635501 0.38023156 0.35075298 prediction 0.467804730674084 Functional Loss - HSD3B7 ENSG00000099377;ENSG00000268863 CDS Human other chr16:30997007 chr16:30997010 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_72568 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30997004-30997018
64251 chr16 67063678 67063678 1 + C T DLBC 67063676 + 67063656 67063696 41 GCCCCACGAGGAACGCCAGGCACGCTTCCAGAACGCCTGCC GCCCCACGAGGAACGCCAGGCATGCTTCCAGAACGCCTGCC < 41bp 0.733900203857764 0.480977704096584 0.14196554 0.1996584 prediction 0.467800407715528 Functional Loss - CBFB ENSG00000067955 CDS Human protein_coding chr16:67063676 chr16:67063678 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_72569 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:67063660-67063711
64251 chr11 77301121 77301121 1 + G A rs192278505 77301118 + 77301098 77301138 41 ATGCTGTCGGTGGTGCTGCTCATGGGGCTGGCCCGCGTAGT ATGCTGTCGGTGGTGCTGCTCATAGGGCTGGCCCGCGTAGT < 41bp 0.789694862756304 0.555795563928045 0.8102809 0.378548 prediction 0.46779859765652 Functional Loss - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301118 chr11:77301121 nonsynonymous SNV 0.851 0 24 hm5C_associated_SNPs_72571 0 0 2 DDX3X POSTAR2 ENCODE chr11:77301120-77301158
64251 chr9 116268695 116268695 1 + A T LUAD 116268691 + 116268671 116268711 41 GTCCGGCGGAACGGGCAGGGCTGCAGCAGCTGGACACGGTG GTCCGGCGGAACGGGCAGGGCTGCTGCAGCTGGACACGGTG < 41bp 0.73389886716755 0.423823258543241 0.60723454 0.7301757 prediction 0.467797734335099 Functional Loss - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116268691 chr9:116268695 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_72572 0 0 4 BUD13 POSTAR2 ENCODE chr9:116268646-116268708
64251 chr1 165620323 165620323 1 + A C GBM 165620322 + 165620302 165620342 41 ATTCAGCGAGCCCACCAGAACACGTGAGTGTCGGCCCTGCC ATTCAGCGAGCCCACCAGAACCCGTGAGTGTCGGCCCTGCC < 41bp 0.810811189697203 0.576914463528544 0.5748525 0.39990276 prediction 0.467793452337318 Functional Loss - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165620322 chr1:165620323 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_72573 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:165620301-165620365
64251 chr12 96350520 96350520 1 + G T LUSC 96350518 + 96350498 96350538 41 CGGAGGAGGGATCCACTTTACCGTGGAGCGCACGCGCCAAG CGGAGGAGGGATCCACTTTACCTTGGAGCGCACGCGCCAAG < 41bp 0.733891375440613 0.369601219083337 0.43367597 0.11855513 prediction 0.467782750881226 Functional Loss - AMDHD1 ENSG00000139344 CDS Human protein_coding chr12:96350518 chr12:96350520 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_72579 0 0 2 GRWD1 POSTAR2 ENCODE chr12:96350503-96350542
64251 chr10 115664637 115664637 1 + A C UCEC 115664633 + 115664613 115664653 41 GCCCGTTCCTAGTAGAAAAACAGAAGACATTACCCAAACTA GCCCGTTCCTAGTAGAAAAACAGACGACATTACCCAAACTA < 41bp 0.733869970828475 0.333933055575746 0.48932824 0.31199798 prediction 0.467739941656949 Functional Loss - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115664633 chr10:115664637 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_72588 0 0 2 FBL POSTAR2 GSE43666,GSM1067864 chr10:115664624-115664655
64251 chrX 102885010 102885010 1 + G A BLCA 102885007 + 102884987 102885027 41 TCTTTCCTGAGGAGCTCTTGCCTGAGCTCCTGCCTGAGATG TCTTTCCTGAGGAGCTCTTGCCTAAGCTCCTGCCTGAGATG < 41bp 0.772965025244128 0.539101489380236 0.2153497 0.10140687 prediction 0.467727071727784 Functional Loss - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102885007 chrX:102885010 nonsynonymous SNV 0.949 3 24 hm5C_associated_SNPs_72591 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102885007-102885082
64251 chr17 4352554 4352554 1 + C T LGG 4352552 + 4352532 4352572 41 GGAGTTTCGTGTGGTCGACCCTCGGAGTGACCGCCATGGCC GGAGTTTCGTGTGGTCGACCCTTGGAGTGACCGCCATGGCC < 41bp 0.810922514735992 0.577062585568071 0.39659783 0.16836154 prediction 0.467719858335844 Functional Loss - SPNS3 ENSG00000182557 CDS Human protein_coding chr17:4352552 chr17:4352554 synonymous SNV . 0 23 hm5C_associated_SNPs_72594 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:4352540-4352560
64251 chr8 28595053 28595053 1 + G A UCEC 28595050 + 28595030 28595070 41 TTCAAGGGTGTGGAGAGAAGCTCGGGACCGCATCGTGGGCT TTCAAGGGTGTGGAGAGAAGCTCAGGACCGCATCGTGGGCT < 41bp 0.733849759652233 0.496226094610409 0.36168203 0.23767042 prediction 0.467699519304466 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28595050 chr8:28595053 nonsynonymous SNV 0.978 5 24 hm5C_associated_SNPs_72601 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28595040-28595080
64251 chr1 161681011 161681011 1 + C T SKCM 161681009 + 161680989 161681029 41 GGACCATAGACTGGCTGATCCTCCAAGGTCCAGCCAAGCCA GGACCATAGACTGGCTGATCCTTCAAGGTCCAGCCAAGCCA < 41bp 0.783672002458513 0.549823648017614 0.9726357 0.07936227 prediction 0.467696708881797 Functional Loss - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681009 chr1:161681011 synonymous SNV . 0 23 hm5C_associated_SNPs_72603 0 0 1 SND1 POSTAR2 ENCODE chr1:161681001-161681146
64251 chr12 56364906 56364906 1 + G T UCEC 56364903 + 56364883 56364923 41 TCTTTCGGACTCTGGGGACCCCAGATGAGGTGGTGTGGCCA TCTTTCGGACTCTGGGGACCCCATATGAGGTGGTGTGGCCA < 41bp 0.733843673724746 0.339499330120731 0.9018204 0.9096197 prediction 0.467687347449491 Functional Loss - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56364903 chr12:56364906 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72605 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:56364856-56364934
64251 chr11 120530999 120530999 1 + G T LIHC 120530997 + 120530977 120531017 41 GAGTTATGTCATGCCCAGGCCAGCAGGGGGCTCCATGAGGA GAGTTATGTCATGCCCAGGCCATCAGGGGGCTCCATGAGGA < 41bp 0.773590404327734 0.539765976708356 0.06756231 0.09964502 prediction 0.467648855238757 Functional Loss - GRIK4 ENSG00000149403 UTR5 Human protein_coding chr11:120530997 chr11:120530999 . . 0 23 hm5C_associated_SNPs_72616 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:120530989-120531013
64251 chr3 101395629 101395629 1 - C T rs3749323 101395632 - 101395612 101395652 41 CTGCCGCCTGCTACGTGGTGCGCGGCGGGACTCTGTATTAC CTGCCGCCTGCTACGTGGTGCGCAGCGGGACTCTGTATTAC < 41bp 0.74667196189554 0.512853435156578 0.32947427 0.10218254 prediction 0.467637053477923 Functional Loss - ZBTB11 ENSG00000066422 CDS Human protein_coding chr3:101395632 chr3:101395629 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_72620 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:101395614-101395633
64251 chr1 26506964 26506964 1 + G A SKCM 26506961 + 26506941 26506981 41 CAGGTCTTGACGACTCCCTGCAGGACTATCCCTTTGAGGAC CAGGTCTTGACGACTCCCTGCAGAACTATCCCTTTGAGGAC < 41bp 0.769876251178534 0.536066792352739 0.5329195 0.18016338 prediction 0.467618917651591 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26506961 chr1:26506964 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_72621 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:26506944-26506975
64251 chr12 132605051 132605051 1 + C T rs113735087 132605049 + 132605029 132605069 41 TGCTGAAGCTGCAGGAGGCCCACGACCCAAGTCCCACTGGG TGCTGAAGCTGCAGGAGGCCCATGACCCAAGTCCCACTGGG < 41bp 0.78654715758762 0.55274105609479 0.48218012 0.7439057 prediction 0.467612202985659 Functional Loss - EP400NL ENSG00000185684 UTR3 Human protein_coding chr12:132605049 chr12:132605051 . . 0 23 hm5C_associated_SNPs_72623 0 0 2 PPIG POSTAR2 ENCODE chr12:132604965-132605082
64251 chr13 100635377 100635377 1 + C T rs1831992 100635375 + 100635355 100635395 41 GCTCCGAGAACCTCAAGATCCACAAAAGGACCCACACAGGT GCTCCGAGAACCTCAAGATCCATAAAAGGACCCACACAGGT < 41bp 0.733794935671767 0.479326993817525 0.011622012 0.020938545 prediction 0.467589871343534 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100635375 chr13:100635377 synonymous SNV . 0 23 hm5C_associated_SNPs_72630 1 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:100635347-100635385
64251 chr2 224822360 224822360 1 + C T UCEC 224822358 + 224822338 224822378 41 TTCTGCGGTGCCCGCCGCCGCCCGTGCGCCGGTAGGAGCCA TTCTGCGGTGCCCGCCGCCGCCTGTGCGCCGGTAGGAGCCA < 41bp 0.737561077601682 0.503783942889108 0.2505455 0.17741323 prediction 0.467554269425149 Functional Loss - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224822358 chr2:224822360 synonymous SNV . 0 23 hm5C_associated_SNPs_72637 0 0 1 PRPF8 POSTAR2 ENCODE chr2:224822359-224822413
64251 chr6 56919132 56919132 1 + A C UCEC 56919131 + 56919111 56919151 41 TATTACTAGACAATATAATTCAGCACATGAACCTACGCCTT TATTACTAGACAATATAATTCCGCACATGAACCTACGCCTT < 41bp 0.746994853449659 0.513224564429628 0.52752525 0.2405526 prediction 0.467540578040063 Functional Loss - KIAA1586 ENSG00000168116 CDS Human protein_coding chr6:56919131 chr6:56919132 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_72644 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:56919119-56919147
64251 chr19 6750366 6750366 1 + G A LUAD 6750363 + 6750343 6750383 41 GGGGAGACAGCCTGAGCCGGCACGCCCGGCCTCCCGACCCC GGGGAGACAGCCTGAGCCGGCACACCCGGCCTCCCGACCCC < 41bp 0.733765741436876 0.47919713840291 0.1607188 0.106588006 prediction 0.467531482873752 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750363 chr19:6750366 nonsynonymous SNV 0.810 0 24 hm5C_associated_SNPs_72648 0 0 2 DDX55 POSTAR2 ENCODE chr19:6750341-6750396
64251 chr4 151504558 151504558 1 + G A UCEC 151504555 + 151504535 151504575 41 GGCGTCGGGCTATCTCTCAGCGCGTAAGATCCGCTCGCGTT GGCGTCGGGCTATCTCTCAGCGCATAAGATCCGCTCGCGTT < 41bp 0.753562743787974 0.519806841545052 0.6200587 0.43787917 prediction 0.467511804485843 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504555 chr4:151504558 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_72651 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr4:151504524-151504567
64251 chr19 44612005 44612005 1 - A G rs3746321 44612006 - 44611986 44612026 41 TTCACATTTGAATGGTTTTTCTCCACTGTGCAGTCTCTGAT TTCACATTTGAATGGTTTTTCCCCACTGTGCAGTCTCTGAT < 41bp 0.733752755555208 0.485027119325646 0.9172945 0.05541134 prediction 0.467505511110416 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612006 chr19:44612005 synonymous SNV . 0 22 hm5C_associated_SNPs_72653 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:44611981-44612017
64251 chr16 30783205 30783205 1 + G A COAD 30783202 + 30783182 30783222 41 ACCTGAAGGTGCAGCTGGAGCACGTGCAGACTCGGCTGCGG ACCTGAAGGTGCAGCTGGAGCACATGCAGACTCGGCTGCGG < 41bp 0.749567734724496 0.51581700641628 0.19356582 0.18660197 prediction 0.467501456616431 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30783202 chr16:30783205 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_72654 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30783199-30783225
64251 chr3 186299271 186299271 1 + G C SARC 186299267 + 186299247 186299287 41 CCTGGGCGCTTCCAAATGACCCAGGAGGTGGTCTGCGACGA CCTGGGCGCTTCCAAATGACCCAGCAGGTGGTCTGCGACGA < 41bp 0.733748522795469 0.452717469487976 0.14979929 0.054683417 prediction 0.467497045590937 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186299267 chr3:186299271 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_72656 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:186299245-186299283
64251 chr17 694808 694808 1 + G A rs543556679 694805 + 694785 694825 41 GCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGGGCGCACA GCCTGGGAGCCCAAAGTGCTCCGAGCGGGTATGGGCGCACA < 41bp 0.739176251042085 0.505428989384285 0.41096303 0.22604889 prediction 0.4674945233156 Functional Loss - MRM3 ENSG00000171861 CDS Human protein_coding chr17:694805 chr17:694808 synonymous SNV . 0 24 hm5C_associated_SNPs_72658 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:694789-694834
64251 chr11 63676896 63676896 1 + A C rs182664 63676892 + 63676872 63676912 41 GGGGGTGGGAGATTGTTCTCCAGCACCCCACATTCACCCCT GGGGGTGGGAGATTGTTCTCCAGCCCCCCACATTCACCCCT < 41bp 0.73374571144283 0.340208846763394 0.088020265 0.19691655 prediction 0.467491422885659 Functional Loss - MARK2 ENSG00000072518 UTR3 Human protein_coding chr11:63676892 chr11:63676896 . . 0 25 hm5C_associated_SNPs_72661 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1486177 chr11:63676895-63676896
64251 chr5 156727797 156727797 1 + T C ESCA 156727796 + 156727776 156727816 41 GCGCAGGAAGGACTTTGTCTCTGAGGCCTACCTCCTGACCC GCGCAGGAAGGACTTTGTCTCCGAGGCCTACCTCCTGACCC < 41bp 0.745496660608694 0.51175419691627 0.8848505 0.9286062 prediction 0.467484927384847 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156727796 chr5:156727797 synonymous SNV . 0 22 hm5C_associated_SNPs_72662 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:156727790-156727826
64251 chr2 242509546 242509546 1 + C T UCEC 242509544 + 242509524 242509564 41 ATCTCTCTCCCTGCAGGCATCACGTGGGGCAAGGTGGTGTC ATCTCTCTCCCTGCAGGCATCATGTGGGGCAAGGTGGTGTC < 41bp 0.796963906410932 0.563221668644696 0.86748004 0.82533735 prediction 0.467484475532472 Functional Loss - BOK ENSG00000176720 CDS Human protein_coding chr2:242509544 chr2:242509546 nonsynonymous SNV 0.635 4 23 hm5C_associated_SNPs_72663 0 0 2 LIN28B POSTAR2 ENCODE chr2:242509546-242509613
64251 chr8 143808869 143808869 1 + C T rs202056172 143808867 + 143808847 143808887 41 CGTGCGCCGTGCTGCGCGCGCGCCTGCTGCAGCCGCGCGTC CGTGCGCCGTGCTGCGCGCGCGTCTGCTGCAGCCGCGCGTC < 41bp 0.734309453051875 0.500567898744548 0.61820084 0.82720923 prediction 0.467483108614655 Functional Loss - THEM6 ENSG00000130193 CDS Human protein_coding chr8:143808867 chr8:143808869 synonymous SNV . 0 23 hm5C_associated_SNPs_72666 0 0 4 DDX3X POSTAR2 ENCODE chr8:143808812-143808891
64251 chr1 150049214 150049214 1 + G A COAD 150049211 + 150049191 150049231 41 CCCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCTCCTT CCCAGCTATCTAGAACAACTCAAAGGCTTACAGCTCTCCTT < 41bp 0.733738138631689 0.500004192316158 0.89464223 0.40476942 prediction 0.467467892631061 Functional Loss - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150049211 chr1:150049214 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_72670 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:150049204-150049235
64251 chr11 61563658 61563658 1 + C T SKCM 61563656 + 61563636 61563676 41 ACCCTGTGCCAGAAAATTGGCTCCACAAGGAGGCTCACCAG ACCCTGTGCCAGAAAATTGGCTTCACAAGGAGGCTCACCAG < 41bp 0.845513049656163 0.611784575085262 0.82898426 0.19942105 prediction 0.467456949141801 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563656 chr11:61563658 synonymous SNV . 0 23 hm5C_associated_SNPs_72674 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:61563640-61563660
64251 chr20 57598802 57598802 1 + C T PAAD 57598800 + 57598780 57598820 41 AACTGGGCCAAAGGCCACTACACGGAGGGAGCCGAGCTGAT AACTGGGCCAAAGGCCACTACATGGAGGGAGCCGAGCTGAT < 41bp 0.803140382755543 0.56941380285185 0.8942943 0.9091643 prediction 0.467453159807387 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598800 chr20:57598802 nonsynonymous SNV 0.882 4 23 hm5C_associated_SNPs_72675 0 0 1 PPIG POSTAR2 ENCODE chr20:57598764-57598805
64251 chr18 72173101 72173101 1 + G C STAD 72173097 + 72173077 72173117 41 TGCTCAGCTCCCTGATGGCTCGGAGATCCCGCTCCCTCCTA TGCTCAGCTCCCTGATGGCTCGGACATCCCGCTCCCTCCTA < 41bp 0.733726519412227 0.422142070325163 0.88467014 0.12725905 prediction 0.467453038824453 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72173097 chr18:72173101 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_72676 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:72173081-72173114
64251 chr19 7523519 7523519 1 + C T BLCA 7523517 + 7523497 7523537 41 CCGGAGATGTATGAAATCTACACGAGCTCCAAAGAGGACAG CCGGAGATGTATGAAATCTACATGAGCTCCAAAGAGGACAG < 41bp 0.832483271487758 0.598776467845795 0.14678979 0.10679817 prediction 0.467413607283926 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7523517 chr19:7523519 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_72684 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:7523510-7523528
64251 chr19 36038064 36038064 1 + G A UCEC 36038061 + 36038041 36038081 41 TGCTCAGGTCTGGATGATAACACGCTATGATCTGTACCACA TGCTCAGGTCTGGATGATAACACACTATGATCTGTACCACA < 41bp 0.733698568326475 0.492626424158407 0.13456497 0.1527077 prediction 0.46739713665295 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36038061 chr19:36038064 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72685 0 0 9 SSB POSTAR2 GSE95683,GSM2521599 chr19:36038043-36038069
64251 chr5 149918868 149918868 1 + G T ESCA 149918865 + 149918845 149918885 41 ACCCTGGCGGCTCCAGTGAGCTGGACAAGATCATCAACGGG ACCCTGGCGGCTCCAGTGAGCTGTACAAGATCATCAACGGG < 41bp 0.73369821393918 0.335383633154099 0.15035051 0.10032013 prediction 0.46739642787836 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149918865 chr5:149918868 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_72686 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:149918860-149918880
64251 chr4 76708240 76708240 1 + C T BRCA 76708238 + 76708218 76708258 41 GTTCGTGTATTGGTATCTCCCACCAACCCTCCTGGTGCTAC GTTCGTGTATTGGTATCTCCCATCAACCCTCCTGGTGCTAC < 41bp 0.848141918590883 0.614444284768675 0.042922437 0.042295992 prediction 0.467395267644415 Functional Loss - USO1 ENSG00000138768 CDS Human protein_coding chr4:76708238 chr4:76708240 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_72687 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:76708230-76708254
64251 chr1 218458683 218458683 1 + C T COAD 218458681 + 218458661 218458701 41 GGCAGCCGCCGCTCCGGACTCACGTGTGAGTGAGGAAGAAA GGCAGCCGCCGCTCCGGACTCATGTGTGAGTGAGGAAGAAA < 41bp 0.758257481632125 0.524563125192582 0.43623605 0.38740897 prediction 0.467388712879087 Functional Loss - RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458681 chr1:218458683 nonsynonymous SNV 0.780 2 23 hm5C_associated_SNPs_72690 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr1:218458658-218458683
64251 chr9 139872093 139872093 1 + G T COAD 139872091 + 139872071 139872111 41 TGGGGGTGCTGGGCGACCTGCAGGCAGCACCGGAGGCCCAG TGGGGGTGCTGGGCGACCTGCATGCAGCACCGGAGGCCCAG < 41bp 0.733692958380237 0.370537571276488 0.6996403 0.10302165 prediction 0.467385916760475 Functional Loss - PTGDS ENSG00000107317 CDS Human protein_coding chr9:139872091 chr9:139872093 nonsynonymous SNV 0.014 0 23 hm5C_associated_SNPs_72693 0 0 1 FUS POSTAR2 GSE43308,GSM1060383 chr9:139872080-139872100
64251 chr11 13729478 13729478 1 + C T UCEC 13729476 + 13729456 13729496 41 TCAGTTAAATGTGATTGCAACGCGACAGCTTATTCTCCTTG TCAGTTAAATGTGATTGCAACGTGACAGCTTATTCTCCTTG < 41bp 0.733689410131369 0.45148753111632 0.27298805 0.121889025 prediction 0.467378820262737 Functional Loss - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13729476 chr11:13729478 stopgain 0.327 0 23 hm5C_associated_SNPs_72695 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:13729453-13729499
64251 chr15 89173301 89173301 1 + G A COAD 89173298 + 89173278 89173318 41 CTCGTCAGTAGGTGGGCCAGCACGGGCACTCATCAGTAGAA CTCGTCAGTAGGTGGGCCAGCACAGGCACTCATCAGTAGAA < 41bp 0.765191621065515 0.531509236112191 0.6422858 0.7856295 prediction 0.467364769906648 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89173298 chr15:89173301 nonsynonymous SNV 0.247 4 24 hm5C_associated_SNPs_72699 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:89173288-89173313
64251 chr18 77796710 77796710 1 + G A UCEC 77796707 + 77796687 77796727 41 AGTCCTTCCTTGGGTTCTCACTCGGTGAGTATAAGCCATGA AGTCCTTCCTTGGGTTCTCACTCAGTGAGTATAAGCCATGA < 41bp 0.743299118825903 0.509626894195784 0.1728198 0.14799914 prediction 0.467344449260238 Functional Loss - RBFA ENSG00000101546 CDS Human protein_coding chr18:77796707 chr18:77796710 synonymous SNV . 0 24 hm5C_associated_SNPs_72702 0 0 3 EFTUD2 POSTAR2 ENCODE chr18:77796678-77796742
64251 chr4 8469962 8469962 1 + C T BRCA 8469960 + 8469940 8469980 41 GAGGAACTGTGCCGCCCTGCCACGAGATTTTATTGACCAAG GAGGAACTGTGCCGCCCTGCCATGAGATTTTATTGACCAAG < 41bp 0.733663833808438 0.444332545533969 0.24281001 0.29397428 prediction 0.467327667616875 Functional Loss - TRMT44 ENSG00000155275 CDS Human protein_coding chr4:8469960 chr4:8469962 stopgain 0.005 1 23 hm5C_associated_SNPs_72705 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:8469953-8469974
64251 chr13 114291015 114291015 1 + G T UCEC 114291013 + 114290993 114291033 41 GGCTCTGGAGCCATACGTGACAGGTCAGCAATGCCCAGACA GGCTCTGGAGCCATACGTGACATGTCAGCAATGCCCAGACA < 41bp 0.733663516969478 0.374848728877583 0.3429736 0.13510033 prediction 0.467327033938955 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114291013 chr13:114291015 stopgain 0.625 1 23 hm5C_associated_SNPs_72706 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:114290985-114291015
64251 chr7 133749196 133749196 1 + C T UCEC 133749194 + 133749174 133749214 41 GGGGAACTGACCACCCAGAACACGAGGCTGCAGAGGCTCAA GGGGAACTGACCACCCAGAACATGAGGCTGCAGAGGCTCAA < 41bp 0.765999203428879 0.532336960441596 0.5203991 0.37696934 prediction 0.467324485974566 Functional Loss - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133749194 chr7:133749196 nonsynonymous SNV 0.552 0 23 hm5C_associated_SNPs_72708 0 0 1 FMR1 POSTAR2 ENCODE chr7:133749083-133749250
64251 chr19 7676674 7676674 1 + C T rs200273174 7676672 + 7676652 7676692 41 GTGCTCCTCCGCTCTGTGAGCTCGGACAGCCTGGGCCCCCC GTGCTCCTCCGCTCTGTGAGCTTGGACAGCCTGGGCCCCCC < 41bp 0.805605429361071 0.571948291055628 0.49995628 0.38538906 prediction 0.467314276610885 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676672 chr19:7676674 nonsynonymous SNV 0.812 3 23 hm5C_associated_SNPs_72710 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr2 220396750 220396750 1 + G C ESCA 220396749 + 220396729 220396769 41 CGTCGTTTGAGGCAGGTATTCGGGTGCAGATCCACAGCCAG CGTCGTTTGAGGCAGGTATTCCGGTGCAGATCCACAGCCAG < 41bp 0.877047301486271 0.643400292623006 0.91869754 0.90032244 prediction 0.467294017726529 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220396749 chr2:220396750 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_72712 0 0 4 DDX24 POSTAR2 ENCODE chr2:220396736-220396794
64251 chr10 131959247 131959247 1 + A C COAD 131959246 + 131959226 131959266 41 TGTTTATGAAAGGAACTCCTCAAGAACCACGCTGTGGTAAG TGTTTATGAAAGGAACTCCTCCAGAACCACGCTGTGGTAAG < 41bp 0.789526110527077 0.555883633142349 0.3264969 0.15299952 prediction 0.467284954769456 Functional Loss - GLRX3 ENSG00000108010 CDS Human protein_coding chr10:131959246 chr10:131959247 nonsynonymous SNV 0.856 1 22 hm5C_associated_SNPs_72715 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr10:131959246-131959267
64251 chr6 69665970 69665970 1 + C T UCEC 69665968 + 69665948 69665988 41 AGCCAGTGCTCAGTAACGTGCTCGAATGGGACTCAGCAGAG AGCCAGTGCTCAGTAACGTGCTTGAATGGGACTCAGCAGAG < 41bp 0.780971220642711 0.547331803131428 0.38398877 0.3663747 prediction 0.467278835022566 Functional Loss - ADGRB3 ENSG00000135298 CDS Human protein_coding chr6:69665968 chr6:69665970 nonsynonymous SNV 0.261 2 23 hm5C_associated_SNPs_72719 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr6:69665960-69665988
64251 chr3 25833286 25833286 1 + G C LUAD 25833282 + 25833262 25833302 41 GCCCGGGCTCTGAGCACAAACTCAGATCCCAAGTTGGCATG GCCCGGGCTCTGAGCACAAACTCACATCCCAAGTTGGCATG < 41bp 0.844100032558269 0.61047863545883 0.06464031 0.040886253 prediction 0.467242794198878 Functional Loss - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833282 chr3:25833286 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_72726 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:25833279-25833305
64251 chr6 3078169 3078169 1 + G T UCEC 3078166 + 3078146 3078186 41 CTGATGCACGTGCTGAAAGCCGAGGTAGAGAGGGCCCCTCC CTGATGCACGTGCTGAAAGCCGATGTAGAGAGGGCCCCTCC < 41bp 0.872702519507089 0.639081519055676 0.9114709 0.45065767 prediction 0.467242000902826 Functional Loss - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3078166 chr6:3078169 nonsynonymous SNV 0.230 0 24 hm5C_associated_SNPs_72728 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:3078149-3078189
64251 chr18 59854894 59854894 1 + G C rs200431709 59854890 + 59854870 59854910 41 AAGTGGCCTAGATCCTGGCTCTGCGGGCTCGCTGTCGCCAC AAGTGGCCTAGATCCTGGCTCTGCCGGCTCGCTGTCGCCAC < 41bp 0.835782432893119 0.602167577160109 0.36990276 0.20140055 prediction 0.46722971146602 Functional Loss - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59854890 chr18:59854894 synonymous SNV . 0 25 hm5C_associated_SNPs_72729 0 0 2 EIF3H POSTAR2 ENCODE chr18:59854839-59854959
64251 chr16 57180055 57180055 1 + G A UCEC 57180052 + 57180032 57180072 41 CATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGG CATCAGTGACATGGAGGAGACACAGCATGCCGTGGTGCAGG < 41bp 0.733609792751719 0.494751913225701 0.20699531 0.13543767 prediction 0.467219585503438 Functional Loss - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57180052 chr16:57180055 nonsynonymous SNV 0.958 4 24 hm5C_associated_SNPs_72732 0 0 1 DHX30 POSTAR2 ENCODE chr16:57180035-57180066
64251 chr9 124535444 124535444 1 + G A rs368800049 124535441 + 124535421 124535461 41 CTGGGAAGTTTCAGCACTGCCGCGGAGGAGCTGGCTCGGCG CTGGGAAGTTTCAGCACTGCCGCAGAGGAGCTGGCTCGGCG < 41bp 0.771951154500122 0.538341845997531 0.84809005 0.50884145 prediction 0.467218617005183 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535441 chr9:124535444 synonymous SNV . 0 24 hm5C_associated_SNPs_72733 0 0 2 PPIG POSTAR2 ENCODE chr9:124535418-124535465
64251 chr22 41572908 41572908 1 + C T COAD 41572906 + 41572886 41572926 41 CCCAGAGCCCAGGCGATTCTCGCCGCCTGAGTATCCAGCGC CCCAGAGCCCAGGCGATTCTCGTCGCCTGAGTATCCAGCGC < 41bp 0.733607075735935 0.4722141207908 0.8619734 0.8408893 prediction 0.467214151471871 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41572906 chr22:41572908 synonymous SNV . 0 23 hm5C_associated_SNPs_72734 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:41572907-41572940
64251 chr3 133524717 133524717 1 + G C rs1107413 133524713 + 133524693 133524733 41 ATGGCTTCCGCGGACTCGCGCCGGGTGGCAGATGGCGGCGG ATGGCTTCCGCGGACTCGCGCCGGCTGGCAGATGGCGGCGG < 41bp 0.847879701994415 0.614277100125122 0.91874987 0.87998915 prediction 0.467205203738586 Functional Loss - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133524713 chr3:133524717 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_72737 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:133524665-133524719
64251 chrX 134988269 134988269 1 + G T STAD 134988267 + 134988247 134988287 41 CGTCTTGTCAACTGGTCCCACAGGGCTTATTAATATGGCAG CGTCTTGTCAACTGGTCCCACATGGCTTATTAATATGGCAG < 41bp 0.733596172182773 0.378990241415844 0.23620105 0.035443246 prediction 0.467192344365545 Functional Loss - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134988267 chrX:134988269 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_72739 0 0 2 UCHL5 POSTAR2 ENCODE chrX:134988244-134988298
64251 chr10 103314098 103314098 1 + G A rs41291482 103314095 + 103314075 103314115 41 CATCAGGGCCTGTGAATACCCAGGTGCCTGTATCTTTGCCA CATCAGGGCCTGTGAATACCCAGATGCCTGTATCTTTGCCA < 41bp 0.75319717308921 0.519613746694515 0.3666189 0.25838575 prediction 0.467166852789389 Functional Loss - BTRC ENSG00000166167 UTR3 Human protein_coding chr10:103314095 chr10:103314098 . . 0 24 hm5C_associated_SNPs_72747 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr10:103314088-103314112
64251 chr5 80256799 80256799 1 + G T UCEC 80256797 + 80256777 80256817 41 GAACGAACGCCCGCGCCACCCAGGGCCGGCGCCGGGCAGGG GAACGAACGCCCGCGCCACCCATGGCCGGCGCCGGGCAGGG < 41bp 0.900227106148981 0.666656005860033 0.8976985 0.38374457 prediction 0.467142200577897 Functional Loss - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80256797 chr5:80256799 nonsynonymous SNV 0.832 0 23 hm5C_associated_SNPs_72751 0 0 3 GRWD1 POSTAR2 ENCODE chr5:80256696-80256818
64251 chr19 39691058 39691058 1 + G A STAD 39691055 + 39691035 39691075 41 CTGCTGGCGGCCGACCGCCGCACGGTCATTGCTCAGCACCA CTGCTGGCGGCCGACCGCCGCACAGTCATTGCTCAGCACCA < 41bp 0.781143092572174 0.547577109934498 0.44679755 0.05537966 prediction 0.467131965275353 Functional Loss - NCCRP1 ENSG00000188505 CDS Human protein_coding chr19:39691055 chr19:39691058 synonymous SNV . 0 24 hm5C_associated_SNPs_72752 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:39691054-39691080
64251 chr19 49132455 49132455 1 + C T LUAD 49132453 + 49132433 49132473 41 CTGGGGTGGGGCTGGGGATGCTCCGCTGTCCCCGGACCCAC CTGGGGTGGGGCTGGGGATGCTTCGCTGTCCCCGGACCCAC < 41bp 0.799399475800423 0.565836774793868 0.38494048 0.42883682 prediction 0.467125402013111 Functional Loss - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132453 chr19:49132455 nonsynonymous SNV 0.746 0 23 hm5C_associated_SNPs_72754 0 0 1 TBRG4 POSTAR2 ENCODE chr19:49132436-49132474
64251 chr19 18702978 18702978 1 + A T STAD 18702974 + 18702954 18702994 41 CCAGGACCTTAGGTTTGATGCGGAATCTGCCGAGTGATGGC CCAGGACCTTAGGTTTGATGCGGATTCTGCCGAGTGATGGC < 41bp 0.830161055774162 0.596600044209958 0.90334785 0.8009087 prediction 0.467122023128408 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18702974 chr19:18702978 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_72755 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:18702944-18702985
64251 chr10 5951204 5951204 1 + G A BLCA 5951201 + 5951181 5951221 41 TGAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTG TGAGGGACCACCCCCTCCTCCCCAAGGCTGAGGCGTGTGTG < 41bp 0.733554550073805 0.476544555926382 0.3899814 0.20554778 prediction 0.467109100147609 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951201 chr10:5951204 nonsynonymous SNV 0.052 0 24 hm5C_associated_SNPs_72758 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr10:5951164-5951204
64251 chr10 5951203 5951203 1 + C T UCEC 5951201 + 5951181 5951221 41 TGAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTG TGAGGGACCACCCCCTCCTCCCTGAGGCTGAGGCGTGTGTG < 41bp 0.733554550073805 0.458399264766609 0.3899814 0.24204773 prediction 0.467109100147609 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951201 chr10:5951203 synonymous SNV . 0 23 hm5C_associated_SNPs_72759 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr10:5951164-5951204
64251 chr5 94024243 94024243 1 + T C UCEC 94024242 + 94024222 94024262 41 TTTACCAGCCTTGGGGAAAACTGGTGTGCTTGGGTCTGGAA TTTACCAGCCTTGGGGAAAACCGGTGTGCTTGGGTCTGGAA < 41bp 0.754737309736579 0.521183050047093 0.79725426 0.8284121 prediction 0.467108519378972 Functional Loss - SLF1 ENSG00000133302 CDS Human protein_coding chr5:94024242 chr5:94024243 synonymous SNV . 0 22 hm5C_associated_SNPs_72760 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:94024240-94024259
64251 chr11 111754535 111754535 1 + T C KIRC 111754534 + 111754514 111754554 41 CTGGTTCCCAGGACATCAACCTGAACTGGATCCTCCCCGAT CTGGTTCCCAGGACATCAACCCGAACTGGATCCTCCCCGAT < 41bp 0.733551762483973 0.48275391777203 0.13917688 0.19870684 prediction 0.467103524967946 Functional Loss - C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111754534 chr11:111754535 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_72763 0 0 2 IGF2BP1 POSTAR2 ENCODE chr11:111754494-111754562
64251 chr6 148854931 148854931 1 + A C OV 148854930 + 148854910 148854950 41 GGAGATATCATCGATATAATCAGCAAGCCACCCATGGGGAC GGAGATATCATCGATATAATCCGCAAGCCACCCATGGGGAC < 41bp 0.799268666079897 0.565721760979822 0.6456631 0.1288448 prediction 0.46709381020015 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148854930 chr6:148854931 nonsynonymous SNV 0.975 4 22 hm5C_associated_SNPs_72765 0 0 2 GRWD1 POSTAR2 ENCODE chr6:148854915-148855019
64251 chr14 20822321 20822321 1 + G T STAD 20822319 + 20822299 20822339 41 CACAGCTAGATCTTCGGGTACAGGAGTTAATAAAGTTGATC CACAGCTAGATCTTCGGGTACATGAGTTAATAAAGTTGATC < 41bp 0.733544910118888 0.391425195945078 0.8723264 0.22950524 prediction 0.467089820237776 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20822319 chr14:20822321 nonsynonymous SNV 0.839 3 23 hm5C_associated_SNPs_72766 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20822295-20822324
64251 chr12 54917225 54917225 1 + G T GBM 54917222 + 54917202 54917242 41 ACAATCAGCAAAGCCAAGAACAAGAAAACCAGGAAGCAGAG ACAATCAGCAAAGCCAAGAACAATAAAACCAGGAAGCAGAG < 41bp 0.733543263331655 0.341831700618478 0.91323054 0.90848696 prediction 0.467086526663311 Functional Loss - NCKAP1L ENSG00000123338 CDS Human protein_coding chr12:54917222 chr12:54917225 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_72767 0 0 1 DDX24 POSTAR2 ENCODE chr12:54917177-54917255
64251 chr16 2079717 2079717 1 + C T rs200227663 2079715 + 2079695 2079735 41 AGCGAGGGCTCCCACCCGCCCACGACCCCTGGGAGCCGAAG AGCGAGGGCTCCCACCCGCCCATGACCCCTGGGAGCCGAAG < 41bp 0.798671658976654 0.565145891891182 0.008326322 0.019732118 prediction 0.467051534170944 Functional Loss - SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2079715 chr16:2079717 synonymous SNV . 0 23 hm5C_associated_SNPs_72773 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2079687-2079735
64251 chr7 116166689 116166689 1 + G A HNSC 116166686 + 116166666 116166706 41 CAAGTGTACGACGCGCACACCAAGGAGATCGACCTGGTCAA CAAGTGTACGACGCGCACACCAAAGAGATCGACCTGGTCAA < 41bp 0.733524475669004 0.49109415409658 0.520116 0.35742128 prediction 0.467048951338008 Functional Loss - CAV1 ENSG00000105974 CDS Human protein_coding chr7:116166686 chr7:116166689 synonymous SNV . 0 24 hm5C_associated_SNPs_72774 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:116166672-116166710
64251 chr4 40104402 40104402 1 + C T UCEC 40104400 + 40104380 40104420 41 AGGTGGGGATCAGAAATCTACTCGGGTCTCTGATGTGTTTC AGGTGGGGATCAGAAATCTACTTGGGTCTCTGATGTGTTTC < 41bp 0.733515232685723 0.46757261883975 0.3229364 0.28164762 prediction 0.467030465371446 Functional Loss - N4BP2 ENSG00000078177 CDS Human protein_coding chr4:40104400 chr4:40104402 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_72779 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:40104395-40104416
64251 chr19 11152105 11152105 1 + C T UCEC 11152103 + 11152083 11152123 41 CGACCACCAGCACCCGCAGCCGCGACAAGGACGACGAGAGC CGACCACCAGCACCCGCAGCCGTGACAAGGACGACGAGAGC < 41bp 0.733513262226146 0.474948924052216 0.58597463 0.23471615 prediction 0.467026524452293 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152103 chr19:11152105 synonymous SNV . 0 23 hm5C_associated_SNPs_72780 2 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:11152100-11152120
64251 chr19 37211342 37211342 1 + G T STAD 37211339 + 37211319 37211359 41 CAGTGTGGGAAAGCCTTTAGCAGGAAGTCATATCTCATTCA CAGTGTGGGAAAGCCTTTAGCAGTAAGTCATATCTCATTCA < 41bp 0.922036358128162 0.688532412118563 0.8133727 0.08097044 prediction 0.467007892019197 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37211339 chr19:37211342 nonsynonymous SNV 0.640 2 24 hm5C_associated_SNPs_72788 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37211332-37211348
64251 chr5 901546 901546 1 + G A UCEC 901543 + 901523 901563 41 GGAACCGGGTGGTGCTGCTCCACGGTAAATTATGCAGGCTT GGAACCGGGTGGTGCTGCTCCACAGTAAATTATGCAGGCTT < 41bp 0.756504381965301 0.523007044899505 0.68804455 0.24171999 prediction 0.466994674131592 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:901543 chr5:901546 nonsynonymous SNV 0.174 5 24 hm5C_associated_SNPs_72794 0 0 3 PPIG POSTAR2 ENCODE chr5:901503-901546
64251 chr3 183976322 183976322 1 + G T LIHC 183976319 + 183976299 183976339 41 CCACCTCACCTTGCTTCCTTCAGGACTCAGATCATGAGGAC CCACCTCACCTTGCTTCCTTCAGTACTCAGATCATGAGGAC < 41bp 0.733489995232859 0.353729818801826 0.29606947 0.12435964 prediction 0.466979990465718 Functional Loss - ECE2 ENSG00000145194 CDS Human protein_coding chr3:183976319 chr3:183976322 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_72799 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:183976282-183976322
64251 chr12 104697533 104697533 1 + G T rs571496486 104697530 + 104697510 104697550 41 AGTGCGCATGGGCGGGCGTCCTCGGCTCTAACTGCCGCCAC AGTGCGCATGGGCGGGCGTCCTCTGCTCTAACTGCCGCCAC < 41bp 0.909019495208253 0.675533335102858 0.86797583 0.4486548 prediction 0.46697232021079 Functional Loss - EID3 ENSG00000255150 UTR5 Human protein_coding chr12:104697530 chr12:104697533 . . 0 24 hm5C_associated_SNPs_72801 0 0 7 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr12:104697516-104697537
64251 chr7 127727067 127727067 1 + G A UCEC 127727064 + 127727044 127727084 41 CGGGTGCTGCCAGCTCAAGCCACGGAGTATGCCTTCGCCTT CGGGTGCTGCCAGCTCAAGCCACAGAGTATGCCTTCGCCTT < 41bp 0.735726465353732 0.502240586919379 0.87619865 0.50182074 prediction 0.466971756868707 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127727064 chr7:127727067 synonymous SNV . 0 24 hm5C_associated_SNPs_72802 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:127727037-127727070
64251 chr1 12065913 12065913 1 + C T STAD 12065911 + 12065891 12065931 41 ACATTGAGTTCCATTTCTCTCTCGGATGGACCATGCTGGTG ACATTGAGTTCCATTTCTCTCTTGGATGGACCATGCTGGTG < 41bp 0.831202672408207 0.597726891218139 0.032755196 0.1768114 prediction 0.466951562380137 Functional Loss - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12065911 chr1:12065913 synonymous SNV . 0 23 hm5C_associated_SNPs_72806 2 0 10 FXR2 POSTAR2 GSE39682,GSM977620 chr1:12065898-12065914
64251 chr19 38573180 38573180 1 + G A SKCM 38573177 + 38573157 38573197 41 CCGGGGGAGGCCGACGAGGGCCGGAGCCCCCCGGAAGCCAG CCGGGGGAGGCCGACGAGGGCCGAAGCCCCCCGGAAGCCAG < 41bp 0.763707276988705 0.53023375879206 0.8175771 0.33153832 prediction 0.46694703639329 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573177 chr19:38573180 synonymous SNV . 0 24 hm5C_associated_SNPs_72809 0 0 1 BUD13 POSTAR2 ENCODE chr19:38573177-38573202
64251 chr7 157177592 157177592 1 + G A CESC 157177589 + 157177569 157177609 41 TCATTTGGGTCACTAGGTCACGGGGGCCTCACTTCATTCTC TCATTTGGGTCACTAGGTCACGGAGGCCTCACTTCATTCTC < 41bp 0.733473370390022 0.493480976051644 0.9052003 0.8699067 prediction 0.466946740780044 Functional Loss - DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157177589 chr7:157177592 synonymous SNV . 0 24 hm5C_associated_SNPs_72810 1 0 2 U2AF2 POSTAR2 ENCODE chr7:157177540-157177602
64251 chr20 1099450 1099450 1 + G T STAD 1099448 + 1099428 1099468 41 GGAGGTACTGTTCGCATCGGCAGCGCCGGCCATCACCTGCA GGAGGTACTGTTCGCATCGGCATCGCCGGCCATCACCTGCA < 41bp 0.733470782155754 0.374344373510808 0.3048255 0.1343408 prediction 0.466941564311509 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1099448 chr20:1099450 nonsynonymous SNV 0.449 0 23 hm5C_associated_SNPs_72812 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:1099433-1099458
64251 chr17 80684765 80684765 1 + G A LGG 80684762 + 80684742 80684782 41 ATCATCCCAGCCTTACTCCACGGGGACCTCTGGGGTGGAAA ATCATCCCAGCCTTACTCCACGGAGACCTCTGGGGTGGAAA < 41bp 0.758918430586715 0.525451395661988 0.6341301 0.24400812 prediction 0.466934069849454 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684762 chr17:80684765 synonymous SNV . 0 24 hm5C_associated_SNPs_72816 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:80684751-80684778
64251 chr3 49004687 49004687 1 + G A CESC 49004684 + 49004664 49004704 41 GGGAGCAGCACTGCTCAGTTCTCGTCAAGGACGGCGTGGGC GGGAGCAGCACTGCTCAGTTCTCATCAAGGACGGCGTGGGC < 41bp 0.733466942432321 0.489054504009029 0.55652046 0.28809682 prediction 0.466933884864643 Functional Loss - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49004684 chr3:49004687 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_72817 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:49004655-49004694
64251 chr2 48687004 48687004 1 + C T STAD 48687002 + 48686982 48687022 41 AGCTGTGGTTGACGGTCTCACCCGGAAGTACATGGAAACCA AGCTGTGGTTGACGGTCTCACCTGGAAGTACATGGAAACCA < 41bp 0.733464524216213 0.459254368199669 0.22264352 0.275913 prediction 0.466929048432426 Functional Loss - PPP1R21 ENSG00000162869 CDS Human protein_coding chr2:48687002 chr2:48687004 nonsynonymous SNV 0.953 2 23 hm5C_associated_SNPs_72819 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr2:48687000-48687020
64251 chr12 3103944 3103944 1 + G A rs112824104 3103941 + 3103921 3103961 41 CCAAGCGGAGCCTTGGAGGGCACGGCCGGCACCATTACCTC CCAAGCGGAGCCTTGGAGGGCACAGCCGGCACCATTACCTC < 41bp 0.7411930152305 0.50773021948246 0.4659954 0.78103286 prediction 0.466925591496081 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3103941 chr12:3103944 synonymous SNV . 0 24 hm5C_associated_SNPs_72820 0 0 1 DDX3X POSTAR2 ENCODE chr12:3103903-3103957
64251 chr2 29404720 29404720 1 + G T LUSC 29404718 + 29404698 29404738 41 GACCGAGCAGAGTGACCTATCGGGGAATTAATGGGTCAAAA GACCGAGCAGAGTGACCTATCGTGGAATTAATGGGTCAAAA < 41bp 0.885815242734811 0.652353862123341 0.9385993 0.9033133 prediction 0.46692276122294 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29404718 chr2:29404720 synonymous SNV . 0 23 hm5C_associated_SNPs_72822 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:29404720-29404740
64251 chr7 36438949 36438949 1 + G A rs34285732 36438946 + 36438926 36438966 41 TGCAGCCTCCTCAGTTAAAACACGTATGCAAAAACTTGCAG TGCAGCCTCCTCAGTTAAAACACATATGCAAAAACTTGCAG < 41bp 0.738663329208904 0.505202797436154 0.2548026 0.13827205 prediction 0.466921063545499 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36438946 chr7:36438949 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_72824 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:36438941-36438970
64251 chr19 18779269 18779269 1 + G A LGG 18779266 + 18779246 18779286 41 ATGGAGGTAGGCTGCAGCCACACGTGCGTGGCCGTGCTGGA ATGGAGGTAGGCTGCAGCCACACATGCGTGGCCGTGCTGGA < 41bp 0.733454564453498 0.485744091742833 0.8191124 0.17575353 prediction 0.466909128906995 Functional Loss - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779266 chr19:18779269 synonymous SNV . 0 24 hm5C_associated_SNPs_72827 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:18779269-18779270
64251 chr7 28449695 28449695 1 + G C rs547674326 28449694 + 28449674 28449714 41 ACCTAGGGGGCGGGTGGGCGCGCGCGCAGGGGGCTCGCTCT ACCTAGGGGGCGGGTGGGCGCCCGCGCAGGGGGCTCGCTCT < 41bp 0.834353991796224 0.600900797779676 0.90072054 0.8130065 prediction 0.466906388033095 Functional Loss - CREB5 ENSG00000146592 intronic Human protein_coding chr7:28449694 chr7:28449695 . . 0 22 hm5C_associated_SNPs_72828 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr7:28449671-28449695
64251 chr8 22418864 22418864 1 + G A UCEC 22418861 + 22418841 22418881 41 CCTGCAGACTTGCAGCTGGACTGGACCTTCGAGGAGCCACC CCTGCAGACTTGCAGCTGGACTGAACCTTCGAGGAGCCACC < 41bp 0.752947572055063 0.519498765665539 0.5058435 0.16409022 prediction 0.466897612779049 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22418861 chr8:22418864 stopgain 0.810 1 24 hm5C_associated_SNPs_72830 0 0 6 BUD13 POSTAR2 ENCODE chr8:22418824-22418907
64251 chr20 42203600 42203600 1 + T C LUAD 42203599 + 42203579 42203619 41 CCTTATGATCGAGCAGTGGACTGGTGGTGCTTGGGGGCAGT CCTTATGATCGAGCAGTGGACCGGTGGTGCTTGGGGGCAGT < 41bp 0.765294579254736 0.53185241662505 0.30488956 0.25978535 prediction 0.466884325259371 Functional Loss - SGK2 ENSG00000101049 CDS Human protein_coding chr20:42203599 chr20:42203600 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_72832 0 0 3 BUD13 POSTAR2 ENCODE chr20:42203600-42203632
64251 chr3 51979111 51979111 1 + G A BLCA 51979108 + 51979088 51979128 41 GAGGAGGCCCTGAAAGGCCCCACGGATGGTGGCCAAAGCCT GAGGAGGCCCTGAAAGGCCCCACAGATGGTGGCCAAAGCCT < 41bp 0.772647130957532 0.539209963729284 0.18819496 0.1505146 prediction 0.466874334456497 Functional Loss - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51979108 chr3:51979111 synonymous SNV . 0 24 hm5C_associated_SNPs_72835 0 0 1 PPIG POSTAR2 ENCODE chr3:51979055-51979123
64251 chr6 123039017 123039017 1 + C T UCEC 123039015 + 123038995 123039035 41 CATCTTCAGCAAGGGCAGGCCGCCGGAATGCCTTACCAGAC CATCTTCAGCAAGGGCAGGCCGTCGGAATGCCTTACCAGAC < 41bp 0.840276594553713 0.606839511356968 0.06499988 0.033390343 prediction 0.46687416639349 Functional Loss - PKIB ENSG00000135549 CDS Human protein_coding chr6:123039015 chr6:123039017 synonymous SNV . 0 23 hm5C_associated_SNPs_72836 0 0 1 UPF1 POSTAR2 ENCODE chr6:123039006-123039109
64251 chr1 223947107 223947107 1 + G A GBM 223947104 + 223947084 223947124 41 TGCCGCCAGGAGAGTACATTCTCGTGCCTTCCACCTTCGAA TGCCGCCAGGAGAGTACATTCTCATGCCTTCCACCTTCGAA < 41bp 0.762322493766239 0.528894015842355 0.13828033 0.06476438 prediction 0.466856955847768 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223947104 chr1:223947107 nonsynonymous SNV 0.922 5 24 hm5C_associated_SNPs_72837 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:223947100-223947120
64251 chr14 20813132 20813132 1 + C T SKCM 20813130 + 20813110 20813150 41 AGTTAATAATGGCAACACGGCTCCAGAAGACTCTTCCCCTG AGTTAATAATGGCAACACGGCTTCAGAAGACTCTTCCCCTG < 41bp 0.847313448630956 0.613888888006562 0.8545458 0.088534415 prediction 0.466849121248787 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20813130 chr14:20813132 nonsynonymous SNV 0.019 0 23 hm5C_associated_SNPs_72838 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20813123-20813153
64251 chr2 28635263 28635263 1 + G T STAD 28635261 + 28635241 28635281 41 GCTCACCGCAGAAGCAGTAGCAGCGGGGACCAATCATCAGA GCTCACCGCAGAAGCAGTAGCATCGGGGACCAATCATCAGA < 41bp 0.733415055019156 0.390984318036361 0.23486495 0.06979513 prediction 0.466830110038311 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28635261 chr2:28635263 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_72842 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:28635260-28635300
64251 chr20 43118017 43118017 1 + G A rs36121075 43118014 + 43117994 43118034 41 CTGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGA CTGGACACTGCCACCTGGAACGCAGTACTGCTGGCTTCAGA < 41bp 0.734756756551816 0.501350316933612 0.4296952 0.18380806 prediction 0.466812879236407 Functional Loss - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43118014 chr20:43118017 synonymous SNV . 0 24 hm5C_associated_SNPs_72846 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:43118003-43118023
64251 chr2 74684625 74684625 1 + G T UCEC 74684622 + 74684602 74684642 41 GCGCGGCGGGCAGAAGAGCACAAGAACCAGACTATCGAGCG GCGCGGCGGGCAGAAGAGCACAATAACCAGACTATCGAGCG < 41bp 0.92120179747592 0.687799406655322 0.8740167 0.75288886 prediction 0.466804781641197 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74684622 chr2:74684625 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_72847 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:74684622-74684654
64251 chr9 34241267 34241267 1 + A C rs140613134 34241266 + 34241246 34241286 41 GCCGAGCGGGAAGCAGAGTGCAAAATTGCGGAAGCAGAAGC GCCGAGCGGGAAGCAGAGTGCCAAATTGCGGAAGCAGAAGC < 41bp 0.733394421034265 0.482756020871413 0.3566233 0.16827136 prediction 0.466788842068531 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241266 chr9:34241267 nonsynonymous SNV 0.219 1 22 hm5C_associated_SNPs_72852 0 0 1 UCHL5 POSTAR2 ENCODE chr9:34241249-34241329
64251 chr6 24785964 24785964 1 + A C COAD 24785963 + 24785943 24785983 41 GGATTCTCTAGTGGAAGACTCAGAAATTGGCACGTGTGCTG GGATTCTCTAGTGGAAGACTCCGAAATTGGCACGTGTGCTG < 41bp 0.785036593398209 0.551655336773814 0.574766 0.25978473 prediction 0.466762513248791 Functional Loss - GMNN ENSG00000112312 CDS Human protein_coding chr6:24785963 chr6:24785964 synonymous SNV . 0 22 hm5C_associated_SNPs_72854 0 0 27 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:24785860-24786300
64251 chr15 72875582 72875582 1 + G T PAAD 72875580 + 72875560 72875600 41 GTCGACGAAGGGTTTTGTTACAGCATGTGCATGAAGGCTAT GTCGACGAAGGGTTTTGTTACATCATGTGCATGAAGGCTAT < 41bp 0.733375297523376 0.417344922262733 0.21215451 0.09295362 prediction 0.466750595046753 Functional Loss - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72875580 chr15:72875582 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_72856 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:72875538-72875671
64251 chr10 73767334 73767334 1 + C T COAD 73767332 + 73767312 73767352 41 GAGCCGGGGGGCGCCAACGCCGCGGGCTCGGCCCTGGTGTA GAGCCGGGGGGCGCCAACGCCGTGGGCTCGGCCCTGGTGTA < 41bp 0.772859274616327 0.539489067866363 0.88953793 0.884771 prediction 0.466740413499929 Functional Loss - CHST3 ENSG00000122863 CDS Human protein_coding chr10:73767332 chr10:73767334 nonsynonymous SNV 0.798 2 23 hm5C_associated_SNPs_72859 0 0 1 SND1 POSTAR2 ENCODE chr10:73767295-73767348
64251 chr17 21075427 21075427 1 + G A SKCM 21075424 + 21075404 21075444 41 CTGGGCGTCTTCGGCCTCTTCCGGCTGCTGCAGTGGGTGCG CTGGGCGTCTTCGGCCTCTTCCGACTGCTGCAGTGGGTGCG < 41bp 0.73336968056068 0.474319770428865 0.9014394 0.8543112 prediction 0.466739361121361 Functional Loss - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21075424 chr17:21075427 synonymous SNV . 0 24 hm5C_associated_SNPs_72860 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr17:21075402-21075460
64251 chr14 24646742 24646742 1 + T C rs201931905 24646741 + 24646721 24646761 41 GCTGGGAACCTGGGGCCCTACTCATGGGTGAGTGCCCACCA GCTGGGAACCTGGGGCCCTACCCATGGGTGAGTGCCCACCA < 41bp 0.733360808990526 0.47698602350994 0.17833742 0.23051617 prediction 0.466721617981053 Functional Loss - REC8 ENSG00000100918 CDS Human protein_coding chr14:24646741 chr14:24646742 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_72865 0 0 3 EFTUD2 POSTAR2 ENCODE chr14:24646648-24646775
64251 chr16 31539884 31539884 1 + C T SKCM 31539882 + 31539862 31539902 41 GCAGCAGGTGACAGGGGAGCCCCAAGAGCGAGACAAGGCTC GCAGCAGGTGACAGGGGAGCCCTAAGAGCGAGACAAGGCTC < 41bp 0.822396845531385 0.589051217022901 0.14501667 0.30654457 prediction 0.466691257016967 Functional Loss - AHSP ENSG00000169877 CDS Human protein_coding chr16:31539882 chr16:31539884 stopgain 0.085 0 23 hm5C_associated_SNPs_72871 0 0 1 DDX55 POSTAR2 ENCODE chr16:31539851-31539891
64251 chr22 38870562 38870562 1 + C T SKCM 38870560 + 38870540 38870580 41 AGAGCCAGATCCTGTTTGCTCTCGTCTTCACCACCAGGTAC AGAGCCAGATCCTGTTTGCTCTTGTCTTCACCACCAGGTAC < 41bp 0.806652605326952 0.573313723909492 0.080334485 0.057313234 prediction 0.46667776283492 Functional Loss - KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38870560 chr22:38870562 synonymous SNV . 0 23 hm5C_associated_SNPs_72875 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:38870543-38870589
64251 chr8 27293308 27293308 1 + G A rs41276291 27293305 + 27293285 27293325 41 CGACGAAACCCTGCGAAGGCCCGGAGGTAGGTTCTCGACCC CGACGAAACCCTGCGAAGGCCCGAAGGTAGGTTCTCGACCC < 41bp 0.750741382025703 0.517407648621835 0.90058625 0.34535915 prediction 0.466667466807737 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27293305 chr8:27293308 nonsynonymous SNV 0.371 1 24 hm5C_associated_SNPs_72879 0 0 1 AARS POSTAR2 ENCODE chr8:27293305-27293349
64251 chr16 11272777 11272777 1 + G A rs199894071 11272774 + 11272754 11272794 41 GCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTG GCTGGGACCAGCGGAGACACCGCAGCGAATGCAGATGACTG < 41bp 0.745818191293201 0.512485728272691 0.5183078 0.12405765 prediction 0.46666492604102 Functional Loss - CLEC16A ENSG00000038532 UTR3 Human protein_coding chr16:11272774 chr16:11272777 . . 0 24 hm5C_associated_SNPs_72880 0 0 1 SLTM POSTAR2 ENCODE chr16:11272738-11272792
64251 chr19 16964967 16964967 1 + T C KIRP 16964966 + 16964946 16964986 41 CTCTGCAGGTCCGCCGGGTGCTGAAGAGCCAGGAGGTGTAT CTCTGCAGGTCCGCCGGGTGCCGAAGAGCCAGGAGGTGTAT < 41bp 0.733328251529156 0.476808055930253 0.5934303 0.5877602 prediction 0.466656503058312 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16964966 chr19:16964967 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_72885 0 0 5 DDX24 POSTAR2 ENCODE chr19:16964952-16964993
64251 chr22 50280304 50280304 1 + C T STAD 50280302 + 50280282 50280322 41 GCCGCCTGTCTGCCACCCTCCACGACCCGCGGTACGTCTTC GCCGCCTGTCTGCCACCCTCCATGACCCGCGGTACGTCTTC < 41bp 0.803354376309178 0.570028096639263 0.032961935 0.046904534 prediction 0.466652559339832 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50280302 chr22:50280304 synonymous SNV . 0 23 hm5C_associated_SNPs_72887 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr22:50280300-50280320
64251 chrX 135067928 135067928 1 + G A GBM 135067925 + 135067905 135067945 41 ACCCTCACCATTCTCACAATCTGGCTCTTCAAGCACCGCCG ACCCTCACCATTCTCACAATCTGACTCTTCAAGCACCGCCG < 41bp 0.769801907309761 0.536486131169899 0.03133264 0.003231734 prediction 0.466631552279725 Functional Loss - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135067925 chrX:135067928 stopgain 1.000 0 24 hm5C_associated_SNPs_72892 0 0 1 ZNF622 POSTAR2 ENCODE chrX:135067846-135067958
64251 chr12 4657923 4657923 1 + T C LIHC 4657922 + 4657902 4657942 41 AAGAAAAGCAGCATCTAAAGCTGCAGCACAGCAGAGGAAGA AAGAAAAGCAGCATCTAAAGCCGCAGCACAGCAGAGGAAGA < 41bp 0.800130761902288 0.566818478165094 0.21374974 0.37474528 prediction 0.466624567474389 Functional Loss - RAD51AP1 ENSG00000111247 CDS Human protein_coding chr12:4657922 chr12:4657923 synonymous SNV . 0 22 hm5C_associated_SNPs_72893 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:4657894-4657928
64251 chr17 28508034 28508034 1 + G T UCEC 28508032 + 28508012 28508052 41 AAATGCAGCTTTCGTGAAGCCAGGTGAGGAGACGTGTATGA AAATGCAGCTTTCGTGAAGCCATGTGAGGAGACGTGTATGA < 41bp 0.733311831957468 0.395871280813563 0.92546415 0.6727572 prediction 0.466623663914935 Functional Loss - NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28508032 chr17:28508034 nonsynonymous SNV 0.923 1 23 hm5C_associated_SNPs_72894 0 0 3 PRPF8 POSTAR2 ENCODE chr17:28508015-28508174
64251 chr4 1205877 1205877 1 - G A rs562305900 1205879 - 1205859 1205899 41 GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTC GGGAGGGGGCAGCGCTGGGCCTTGTGTCGCTTGTCGTCGTC < 41bp 0.762847426551954 0.529539337436324 0.20955253 0.2550872 prediction 0.466616178231259 Functional Loss - CTBP1-AS ENSG00000159692 UTR3 Human protein_coding chr4:1205879 chr4:1205877 . . 0 23 hm5C_associated_SNPs_72896 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:1205699-1205877
64251 chr11 118404209 118404209 1 + G T KIRC 118404206 + 118404186 118404226 41 CTGGGCTTGCACTGGGCACCCTCGTGGGGTTCAGCACCTTG CTGGGCTTGCACTGGGCACCCTCTTGGGGTTCAGCACCTTG < 41bp 0.733306117619566 0.344486670130638 0.096950084 0.034089 prediction 0.466612235239133 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118404206 chr11:118404209 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_72897 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118404176-118404241
64251 chr11 118404208 118404208 1 + C T THYM 118404206 + 118404186 118404226 41 CTGGGCTTGCACTGGGCACCCTCGTGGGGTTCAGCACCTTG CTGGGCTTGCACTGGGCACCCTTGTGGGGTTCAGCACCTTG < 41bp 0.733306117619566 0.45313589336901 0.096950084 0.102365375 prediction 0.466612235239133 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118404206 chr11:118404208 synonymous SNV . 0 23 hm5C_associated_SNPs_72898 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118404176-118404241
64251 chrX 152612596 152612596 1 + C T SKCM 152612594 + 152612574 152612614 41 TTAATGAGCACAGGAAAAGCCACGTAGCTGCGGAGCCCCAG TTAATGAGCACAGGAAAAGCCATGTAGCTGCGGAGCCCCAG < 41bp 0.733305781433838 0.481514211840538 0.35536948 0.37892014 prediction 0.466611562867676 Functional Loss - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152612594 chrX:152612596 synonymous SNV . 0 23 hm5C_associated_SNPs_72899 0 0 3 RBM15 POSTAR2 ENCODE chrX:152612487-152612624
64251 chr10 64565386 64565386 1 + G A COAD 64565383 + 64565363 64565403 41 CCCTGCATCCTCACACCGCACCGGGACAACCTGCACCAGAT CCCTGCATCCTCACACCGCACCGAGACAACCTGCACCAGAT < 41bp 0.73330520762946 0.492885898073841 0.8675851 0.16974324 prediction 0.46661041525892 Functional Loss - ADO ENSG00000181915 CDS Human protein_coding chr10:64565383 chr10:64565386 synonymous SNV . 0 24 hm5C_associated_SNPs_72900 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:64565351-64565387
64251 chr16 72699121 72699121 1 + G A rs374220180 72699118 + 72699098 72699138 41 TGGGGCTGCGGCCGTTTCCTCCGGAGCACCCACGGGACTGT TGGGGCTGCGGCCGTTTCCTCCGAAGCACCCACGGGACTGT < 41bp 0.733302142790782 0.497973523675558 0.91191864 0.81547725 prediction 0.466604285581564 Functional Loss - LINC01572 ENSG00000259768 ncRNA_exonic Human antisense chr16:72699118 chr16:72699121 . . 0 24 hm5C_associated_SNPs_72902 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:72699082-72699137
64251 chr3 127981041 127981041 1 + C T SARC 127981039 + 127981019 127981059 41 AGAGGCCCCCGAAACTGAAGCTCCACAGGGCATTCCAGAGC AGAGGCCCCCGAAACTGAAGCTTCACAGGGCATTCCAGAGC < 41bp 0.733301021212456 0.455051554809097 0.91476333 0.19118974 prediction 0.466602042424912 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981039 chr3:127981041 nonsynonymous SNV 0.980 1 23 hm5C_associated_SNPs_72903 0 0 1 GRWD1 POSTAR2 ENCODE chr3:127980982-127981049
64251 chr1 240371804 240371804 1 + G A SKCM 240371801 + 240371781 240371821 41 CCCACTCCCTCCACCTGGGACAGGAATCCCACCGCCCCCTC CCCACTCCCTCCACCTGGGACAGAAATCCCACCGCCCCCTC < 41bp 0.754701173560556 0.521400731672837 0.5911893 0.07857162 prediction 0.466600883775438 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240371801 chr1:240371804 nonsynonymous SNV 0.009 2 24 hm5C_associated_SNPs_72904 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:240371800-240371820
64251 chr1 155282083 155282083 1 + G T STAD 155282081 + 155282061 155282101 41 GCCATTGGAGGCAAGTATAACCGGGGTTTGACGGTGGTAGT GCCATTGGAGGCAAGTATAACCTGGGTTTGACGGTGGTAGT < 41bp 0.733293416649311 0.381093610783968 0.90621567 0.2975823 prediction 0.466586833298622 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155282081 chr1:155282083 nonsynonymous SNV 0.590 4 23 hm5C_associated_SNPs_72907 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:155282077-155282113
64251 chr11 74459939 74459939 1 + G A rs189351853 74459936 + 74459916 74459956 41 GGGAAACAAGATGGCGGCTGCAGGTCCGAGTACTCGGGCCT GGGAAACAAGATGGCGGCTGCAGATCCGAGTACTCGGGCCT < 41bp 0.734342430790014 0.501053109420734 0.7086729 0.405388 prediction 0.46657864273856 Functional Loss - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74459936 chr11:74459939 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_72912 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:74459922-74459950
64251 chr22 40755001 40755001 1 + G A rs148411623 40754998 + 40754978 40755018 41 TAAAGGGTACCACTGGCACTCAGGCCAGTTTCCTGCAGCTC TAAAGGGTACCACTGGCACTCAGACCAGTTTCCTGCAGCTC < 41bp 0.753592259168509 0.520307429980166 0.93374574 0.91596776 prediction 0.466569658376687 Functional Loss - ADSL ENSG00000239900 CDS Human protein_coding chr22:40754998 chr22:40755001 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_72913 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:40754988-40755012
64251 chr16 54967425 54967425 1 + G A rs375662858 54967422 + 54967402 54967442 41 TCTCCATGCCCACCGTGTCCCGGGCCCATAGCCGGGCAAGC TCTCCATGCCCACCGTGTCCCGGACCCATAGCCGGGCAAGC < 41bp 0.77414862560976 0.54086708520156 0.9200673 0.8724346 prediction 0.4665630808164 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967422 chr16:54967425 synonymous SNV 0.585 0 24 hm5C_associated_SNPs_72916 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:54967396-54967432
64251 chr6 7585433 7585433 1 + G A UCEC 7585430 + 7585410 7585450 41 CGGGGCATCGTTGACAGCATCACGGGTCAGAGGCTTCTGGA CGGGGCATCGTTGACAGCATCACAGGTCAGAGGCTTCTGGA < 41bp 0.740672755597717 0.507399369582512 0.5543406 0.12525946 prediction 0.466546772030411 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7585430 chr6:7585433 synonymous SNV . 0 24 hm5C_associated_SNPs_72920 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:7585404-7585433
64251 chr1 156844703 156844703 1 + G A LUSC 156844700 + 156844680 156844720 41 ACCCCTGTCCCCCACCAGGTCTCGGTGGCTGTGGGCCTGGC ACCCCTGTCCCCCACCAGGTCTCAGTGGCTGTGGGCCTGGC < 41bp 0.767881861865161 0.534614077437073 0.19974428 0.12334213 prediction 0.466535568856176 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156844700 chr1:156844703 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_72921 0 0 1 DDX24 POSTAR2 ENCODE chr1:156844695-156844790
64251 chr11 2939325 2939325 1 + G T COAD 2939323 + 2939303 2939343 41 GGTGGCCTCCAACTGCCCCACAGGTGAGTCCCAACTACTGC GGTGGCCTCCAACTGCCCCACATGTGAGTCCCAACTACTGC < 41bp 0.733267718116227 0.380268655221288 0.8809862 0.3206152 prediction 0.466535436232455 Functional Loss - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2939323 chr11:2939325 nonsynonymous SNV 0.039 4 23 hm5C_associated_SNPs_72922 0 0 3 GRWD1 POSTAR2 ENCODE chr11:2939262-2939326
64251 chr4 3447966 3447966 1 + G T UCEC 3447964 + 3447944 3447984 41 CATCGGGGACAGCTTCTGCGCCGGGAGCCTGGTCCACACCT CATCGGGGACAGCTTCTGCGCCTGGAGCCTGGTCCACACCT < 41bp 0.733267687380558 0.372007980074129 0.8672641 0.2384595 prediction 0.466535374761115 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3447964 chr4:3447966 nonsynonymous SNV 0.058 5 23 hm5C_associated_SNPs_72923 0 0 2 GRWD1 POSTAR2 ENCODE chr4:3447942-3448001
64251 chr10 99424653 99424653 1 + G A UCEC 99424650 + 99424630 99424670 41 CTTGCTCTTCAGGACACAGACTGGGTGGTGGTGAAGGAGCC CTTGCTCTTCAGGACACAGACTGAGTGGTGGTGAAGGAGCC < 41bp 0.733267603352371 0.494863325239822 0.3141924 0.09891212 prediction 0.466535206704741 Functional Loss - PI4K2A ENSG00000155252;ENSG00000249967 CDS Human other chr10:99424650 chr10:99424653 stopgain 1.000 1 24 hm5C_associated_SNPs_72924 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:99424635-99424665
64251 chr17 79985312 79985312 1 + G A HNSC 79985309 + 79985289 79985329 41 AAGCAGCGAGAAGAGATGGCCAAGAGCAGCAGGTGAGCGGG AAGCAGCGAGAAGAGATGGCCAAAAGCAGCAGGTGAGCGGG < 41bp 0.753463026618946 0.520197962227563 0.5121985 0.3544348 prediction 0.466530128782766 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79985309 chr17:79985312 synonymous SNV . 0 24 hm5C_associated_SNPs_72928 0 0 8 BUD13 POSTAR2 ENCODE chr17:79985305-79985318
64251 chr22 45944543 45944543 1 + T C STAD 45944542 + 45944522 45944562 41 GGCCACATCTGCTCCTACCGCTGCATCAACATCCCTGGAAG GGCCACATCTGCTCCTACCGCCGCATCAACATCCCTGGAAG < 41bp 0.817544112459353 0.584283993174503 0.05834639 0.10008097 prediction 0.4665202385697 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45944542 chr22:45944543 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_72930 0 0 1 RPS3 POSTAR2 ENCODE chr22:45944492-45944608
64251 chr7 75511505 75511505 1 + C T LUAD 75511503 + 75511483 75511523 41 TGGGTGCCTCGTGGCTCATTCCCCAGACCTCTTTCCTCAGT TGGGTGCCTCGTGGCTCATTCCTCAGACCTCTTTCCTCAGT < 41bp 0.733254207632883 0.452318779403519 0.036189377 0.04216382 prediction 0.466508415265765 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75511503 chr7:75511505 synonymous SNV . 0 23 hm5C_associated_SNPs_72933 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:75511481-75511522
64251 chr12 113664623 113664623 1 + G A rs186758678 113664620 + 113664600 113664640 41 ACCAGAGACTATTTCAAGCCCTGGATATCATATCCTGAGGG ACCAGAGACTATTTCAAGCCCTGAATATCATATCCTGAGGG < 41bp 0.733234682735537 0.489785731622087 0.24256116 0.1389673 prediction 0.466469365471075 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113664620 chr12:113664623 nonsynonymous SNV 0.095 1 24 hm5C_associated_SNPs_72940 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:113664594-113664626
64251 chr12 113664624 113664624 1 + A C rs142521727 113664620 + 113664600 113664640 41 ACCAGAGACTATTTCAAGCCCTGGATATCATATCCTGAGGG ACCAGAGACTATTTCAAGCCCTGGCTATCATATCCTGAGGG < 41bp 0.733234682735537 0.314797560375506 0.24256116 0.14281645 prediction 0.466469365471075 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113664620 chr12:113664624 synonymous SNV . 0 25 hm5C_associated_SNPs_72941 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:113664594-113664626
64251 chr11 65480859 65480859 1 + C T UCEC 65480857 + 65480837 65480877 41 AGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCG AGCGGGAAGACCTTGCCAATCCTGGTCCAGATCACACTCCG < 41bp 0.805245053975779 0.5720202602407 0.47817346 0.55777466 prediction 0.466449587470157 Functional Loss - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65480857 chr11:65480859 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_72947 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65480851-65480877
64251 chr19 8550724 8550724 1 + G C LUSC 8550723 + 8550703 8550743 41 ACATGGCCTCCAGCATTGAGCGCATGGGCCAGACCATGGAG ACATGGCCTCCAGCATTGAGCCCATGGGCCAGACCATGGAG < 41bp 0.733223412116198 0.403305846510777 0.06414646 0.017442286 prediction 0.466446824232396 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550723 chr19:8550724 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_72948 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8550680-8550800
64251 chr4 88977264 88977264 1 + G A OV 88977261 + 88977241 88977281 41 TTCAAATTCATCAATTTTAACAGGACCATGAGCCAGCTCTC TTCAAATTCATCAATTTTAACAGAACCATGAGCCAGCTCTC < 41bp 0.744937863250608 0.511718964240029 0.79945093 0.30546826 prediction 0.466437798021158 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88977261 chr4:88977264 synonymous SNV . 0 24 hm5C_associated_SNPs_72950 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:88977237-88977269
64251 chr9 132569491 132569491 1 + G A STAD 132569488 + 132569468 132569508 41 ACCAGTTACAGAAGTGGATCCGCGGTAATGTGAGTGCATGT ACCAGTTACAGAAGTGGATCCGCAGTAATGTGAGTGCATGT < 41bp 0.73804359289931 0.504827263458404 0.31547588 0.18841088 prediction 0.466432658881811 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132569488 chr9:132569491 nonsynonymous SNV 0.529 3 24 hm5C_associated_SNPs_72953 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr9:132569478-132569497
64251 chr3 126571530 126571530 1 + G C UCEC 126571526 + 126571506 126571546 41 GCAGAGAGGCAGAGCTAAGACGCCGTGACACCTTCTACAAG GCAGAGAGGCAGAGCTAAGACGCCCTGACACCTTCTACAAG < 41bp 0.843734456232226 0.610518921082099 0.19912603 0.07440141 prediction 0.466431070300253 Functional Loss - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126571526 chr3:126571530 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_72954 0 0 2 PPIG POSTAR2 ENCODE chr3:126571489-126571595
64251 chr9 104307082 104307082 1 + T C UCEC 104307081 + 104307061 104307101 41 TGGAGGAAGCAGTGCAGGAGCTGAACTCTTTCCTCGCACAG TGGAGGAAGCAGTGCAGGAGCCGAACTCTTTCCTCGCACAG < 41bp 0.733210249035904 0.486123499955768 0.35668305 0.32737702 prediction 0.466420498071809 Functional Loss - RNF20 ENSG00000155827 CDS Human protein_coding chr9:104307081 chr9:104307082 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_72958 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:104307060-104307086
64251 chr7 50367295 50367295 1 + C T UCEC 50367293 + 50367273 50367313 41 GCGATGAGCCCATGCCGATCCCCGAGGACCTCTCCACCACC GCGATGAGCCCATGCCGATCCCTGAGGACCTCTCCACCACC < 41bp 0.789302652431017 0.556097276221174 0.73512846 0.15163913 prediction 0.466410752419686 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50367293 chr7:50367295 synonymous SNV . 0 23 hm5C_associated_SNPs_72960 0 0 1 DDX24 POSTAR2 ENCODE chr7:50367281-50367340
64251 chr3 49059954 49059954 1 + T C KICH 49059953 + 49059933 49059973 41 CCCTGCGCTCTGCTCCCGCACTCGGTGGTGCAGTGGAACGT CCCTGCGCTCTGCTCCCGCACCCGGTGGTGCAGTGGAACGT < 41bp 0.794625504377189 0.561430942123264 0.17699763 0.2655657 prediction 0.46638912450785 Functional Loss - NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49059953 chr3:49059954 nonsynonymous SNV 0.375 2 22 hm5C_associated_SNPs_72967 0 0 8 TARDBP POSTAR2 DRA001158,DRS012385 chr3:49059911-49059954
64251 chr19 39219726 39219726 1 + C T UCEC 39219724 + 39219704 39219744 41 AGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGG AGCCTTCATCGACTTCATGTCGTGGGAGACCACCGACACGG < 41bp 0.82133649244884 0.588143704006158 0.9100625 0.8934141 prediction 0.466385576885364 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39219724 chr19:39219726 nonsynonymous SNV 0.972 3 23 hm5C_associated_SNPs_72968 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39219701-39219787
64251 chr11 119003653 119003653 1 + T C STAD 119003652 + 119003632 119003672 41 TACAGGTGTGATTTTGAGAACTGCACCTTCAGTGCCCGATC TACAGGTGTGATTTTGAGAACCGCACCTTCAGTGCCCGATC < 41bp 0.803123147144521 0.569931298047698 0.1863702 0.22730866 prediction 0.466383698193646 Functional Loss - HINFP ENSG00000172273 CDS Human protein_coding chr11:119003652 chr11:119003653 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_72969 0 0 2 DDX24 POSTAR2 ENCODE chr11:119003573-119003705
64251 chr7 36327313 36327313 1 + G T READ 36327310 + 36327290 36327330 41 GCCCTGACCCTCCTGGGGAGCGAGAATCCCAGCAAGAATCA GCCCTGACCCTCCTGGGGAGCGATAATCCCAGCAAGAATCA < 41bp 0.733184427159028 0.334995028214439 0.58639 0.20075014 prediction 0.466368854318055 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36327310 chr7:36327313 nonsynonymous SNV 0.437 1 24 hm5C_associated_SNPs_72973 0 0 1 GRWD1 POSTAR2 ENCODE chr7:36327296-36327389
64251 chr17 76166922 76166922 1 + T C STAD 76166921 + 76166901 76166941 41 TTCGCCTTGATCGTGTTCTCCTGCATCTATGGTGAGGGCTA TTCGCCTTGATCGTGTTCTCCCGCATCTATGGTGAGGGCTA < 41bp 0.777036795730401 0.543853303592628 0.51909614 0.39781812 prediction 0.466366984275544 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76166921 chr17:76166922 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_72975 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr17:76166898-76166944
64251 chr11 95552020 95552020 1 + C T SKCM 95552018 + 95551998 95552038 41 TGCAAGAGTTGGAAGCAAAACTCCATGAAGAAGAACAGGAA TGCAAGAGTTGGAAGCAAAACTTCATGAAGAAGAACAGGAA < 41bp 0.866661357374127 0.633482268284384 0.9424534 0.061757118 prediction 0.466358178179486 Functional Loss - CEP57 ENSG00000166037 CDS Human protein_coding chr11:95552018 chr11:95552020 synonymous SNV . 0 23 hm5C_associated_SNPs_72977 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:95551996-95552033
64251 chr12 124102337 124102337 1 + G A BLCA 124102334 + 124102314 124102354 41 GCATCGCTGCGGTCGCACAGCTCGCATTGGCCACGGGGGCA GCATCGCTGCGGTCGCACAGCTCACATTGGCCACGGGGGCA < 41bp 0.733178717989292 0.481197286974348 0.10016072 0.059804052 prediction 0.466357435978584 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124102334 chr12:124102337 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_72978 0 0 1 DDX24 POSTAR2 ENCODE chr12:124102303-124102354
64251 chr6 25972267 25972267 1 + C T BLCA 25972265 + 25972245 25972285 41 TGGGGCTGAAGAGCAATGAACTCAAGAGCCACATCCTGGAA TGGGGCTGAAGAGCAATGAACTTAAGAGCCACATCCTGGAA < 41bp 0.820805606835212 0.587634215873282 0.5347408 0.45930833 prediction 0.466342781923861 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25972265 chr6:25972267 synonymous SNV . 0 23 hm5C_associated_SNPs_72981 0 0 4 RBM15 POSTAR2 ENCODE chr6:25972159-25972272
64251 chr10 111967798 111967798 1 + G C rs147367954 111967797 + 111967777 111967817 41 CAGAACGTGCAGATTCTGCTCGAGGCCGCCAGCTACCTGGA CAGAACGTGCAGATTCTGCTCCAGGCCGCCAGCTACCTGGA < 41bp 0.733169283175185 0.421569645446011 0.90169084 0.85394275 prediction 0.46633856635037 Functional Loss - MXI1 ENSG00000119950 CDS Human protein_coding chr10:111967797 chr10:111967798 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_72982 0 0 2 GRWD1 POSTAR2 ENCODE chr10:111967772-111967831
64251 chr19 58198887 58198887 1 + G A rs532637422 58198884 + 58198864 58198904 41 TCGACATAGAAGAGTTCACACTGGAGAAATGCCTTATCAGT TCGACATAGAAGAGTTCACACTGAAGAAATGCCTTATCAGT < 41bp 0.747780931628814 0.514632982232901 0.078134 0.022877008 prediction 0.466295898791826 Functional Loss - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198884 chr19:58198887 nonsynonymous SNV 0.879 1 24 hm5C_associated_SNPs_72988 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:58198865-58198894
64251 chr9 140510182 140510182 1 - G A COAD 140510184 - 140510164 140510204 41 GACCTGGGCAAGCCCCTCCACGCGCCAGCGGGTTTCTCAGC GACCTGGGCAAGCCCCTCCACGTGCCAGCGGGTTTCTCAGC < 41bp 0.748673556526775 0.515525707760407 0.037116736 0.020686865 prediction 0.466295697532736 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510184 chr9:140510182 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_72989 0 0 2 DDX3X POSTAR2 GSE59096,GSM1427358 chr9:140510180-140510200
64251 chr10 22016857 22016857 1 + G T READ 22016854 + 22016834 22016874 41 ACCCCGAGGAAGTCTCTCGCCACGGTAAGCGCTATTTACAC ACCCCGAGGAAGTCTCTCGCCACTGTAAGCGCTATTTACAC < 41bp 0.733147349476192 0.373094995124029 0.74113786 0.14433238 prediction 0.466294698952384 Functional Loss - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:22016854 chr10:22016857 nonsynonymous SNV 0.739 5 24 hm5C_associated_SNPs_72990 0 0 2 PRPF8 POSTAR2 ENCODE chr10:22016784-22016884
64251 chr17 42427660 42427660 1 + G A rs543344476 42427657 + 42427637 42427677 41 TTCGAATGCCCGGACTTCTCCACGTGCTGTGTTATGGTCGA TTCGAATGCCCGGACTTCTCCACATGCTGTGTTATGGTCGA < 41bp 0.733143605525741 0.486243292843272 0.90259403 0.2031546 prediction 0.466287211051483 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42427657 chr17:42427660 synonymous SNV . 0 24 hm5C_associated_SNPs_72991 0 0 10 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr17:42427640-42427660
64251 chr17 38609374 38609374 1 + C T UCEC 38609372 + 38609352 38609392 41 GATGAAGGTCAATGGGGCGCCCCGGGAGGATGCCCGGCCTG GATGAAGGTCAATGGGGCGCCCTGGGAGGATGCCCGGCCTG < 41bp 0.79129971364259 0.558177235221011 0.8512845 0.87408775 prediction 0.466244956843159 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38609372 chr17:38609374 nonsynonymous SNV 0.795 2 23 hm5C_associated_SNPs_73002 0 0 1 SND1 POSTAR2 ENCODE chr17:38609370-38609392
64251 chr7 94294955 94294955 1 + A C rs559209797 94294954 + 94294934 94294974 41 GCCACAGCCGCCGCCTCCACCACCACCACCGCCGCCGCCTC GCCACAGCCGCCGCCTCCACCCCCACCACCGCCGCCGCCTC < 41bp 0.775157647137319 0.542040881747545 0.301665 0.17820495 prediction 0.466233530779548 Functional Loss - PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94294954 chr7:94294955 . . 0 22 hm5C_associated_SNPs_73005 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:94294940-94294960
64251 chr11 375665 375665 1 + G A STAD 375662 + 375642 375682 41 AGTCAGCCTTGAAGATGGACCACGTGGCGCACGTCCCCCAG AGTCAGCCTTGAAGATGGACCACATGGCGCACGTCCCCCAG < 41bp 0.766263057385113 0.533161189423919 0.21960121 0.08065355 prediction 0.466203735922389 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:375662 chr11:375665 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_73015 0 0 3 GRWD1 POSTAR2 ENCODE chr11:375638-375677
64251 chr16 72143392 72143392 1 + G A STAD 72143389 + 72143369 72143409 41 CCATGTTCTATAGCGTGAAACAGGCGGGCAAGTCACGGCAG CCATGTTCTATAGCGTGAAACAGACGGGCAAGTCACGGCAG < 41bp 0.787208637601669 0.554114063132828 0.40697283 0.2581586 prediction 0.466189148937682 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72143389 chr16:72143392 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_73018 0 0 3 EIF3H POSTAR2 ENCODE chr16:72143378-72143410
64251 chr9 127636024 127636024 1 + C T UCEC 127636022 + 127636002 127636042 41 TTGCGGAACTCTCCCGTCAACACCAAGAATCAAGCTGTGAA TTGCGGAACTCTCCCGTCAACATCAAGAATCAAGCTGTGAA < 41bp 0.843528362605366 0.61043395043225 0.14821038 0.04783547 prediction 0.466188824346233 Functional Loss - ARPC5L ENSG00000136950 CDS Human protein_coding chr9:127636022 chr9:127636024 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_73019 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:127635970-127636032
64251 chr6 139017762 139017762 1 + G A rs578213074 139017759 + 139017739 139017779 41 CCTATGGACAGAAGTGCGGGCAAGGAGCTTTGTTCCTCCCC CCTATGGACAGAAGTGCGGGCAAAGAGCTTTGTTCCTCCCC < 41bp 0.734409874838009 0.501321024502772 0.8495457 0.7567182 prediction 0.466177700670474 Functional Loss - FLJ46906 ENSG00000225177 ncRNA_exonic Human antisense chr6:139017759 chr6:139017762 . . 0 24 hm5C_associated_SNPs_73022 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr6:139017733-139017765
64251 chr7 1026366 1026366 1 + G A BLCA 1026363 + 1026343 1026383 41 TCTGAGGACCCTCCTGGAGGCGCGGAGGCCCCACGTGTGCC TCTGAGGACCCTCCTGGAGGCGCAGAGGCCCCACGTGTGCC < 41bp 0.768637393864346 0.53554944233261 0.8016205 0.6324315 prediction 0.466175903063472 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1026363 chr7:1026366 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_73023 0 0 7 GRWD1 POSTAR2 ENCODE chr7:1026330-1026390
64251 chr1 11082258 11082258 1 + C T rs528733699 11082256 + 11082236 11082276 41 TATCCAATGCCGAACCTAAGCACAATAGCAATAGACAGTTA TATCCAATGCCGAACCTAAGCATAATAGCAATAGACAGTTA < 41bp 0.820010781569992 0.586928442962725 0.046511084 0.036676794 prediction 0.466164677214532 Functional Loss - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11082256 chr1:11082258 synonymous SNV . 0 23 hm5C_associated_SNPs_73025 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11082178-11082508
64251 chr5 162939126 162939126 1 + G T LUAD 162939124 + 162939104 162939144 41 CATGCAGTTGGCTGTGGTTTCAGAAGAGCAAGACCAAAATT CATGCAGTTGGCTGTGGTTTCATAAGAGCAAGACCAAAATT < 41bp 0.885411609904626 0.652333419044852 0.3650195 0.12335235 prediction 0.466156381719549 Functional Loss - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162939124 chr5:162939126 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_73027 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:162939063-162939134
64251 chr22 23524240 23524240 1 + G A GBM 23524237 + 23524217 23524257 41 CCACCACCTACCGCATGTTCCGGGACAAAAGCCGCTCTCCC CCACCACCTACCGCATGTTCCGGAACAAAAGCCGCTCTCCC < 41bp 0.738168118449697 0.50509460701527 0.93052685 0.8998107 prediction 0.466147022868856 Functional Loss - BCR ENSG00000186716 CDS Human protein_coding chr22:23524237 chr22:23524240 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_73028 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:23524233-23524260
64251 chr21 48083366 48083366 1 + C T CESC 48083364 + 48083344 48083384 41 GTCCATACAGGAGACGTGGTCACGGGTTCAGTTGTGTTGCA GTCCATACAGGAGACGTGGTCATGGGTTCAGTTGTGTTGCA < 41bp 0.791078588047139 0.558007198019271 0.88066375 0.88328063 prediction 0.466142780055736 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48083364 chr21:48083366 nonsynonymous SNV 0.238 1 23 hm5C_associated_SNPs_73029 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr21:48083359-48083397
64251 chr10 74034625 74034625 1 + G A BLCA 74034622 + 74034602 74034642 41 ATGCCTAGCCAGTTGGTAAGCCAGGTGGGCAAAGAACTACT ATGCCTAGCCAGTTGGTAAGCCAAGTGGGCAAAGAACTACT < 41bp 0.734567795226694 0.501497113233694 0.87909484 0.5629554 prediction 0.466141363986001 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034622 chr10:74034625 synonymous SNV . 0 24 hm5C_associated_SNPs_73032 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:74034600-74034629
64251 chr19 16337310 16337310 1 + G A UCEC 16337307 + 16337287 16337327 41 GAGTCTTCCTCTCGGGCATGCCCGAGCTGCGCCTGGGCCTC GAGTCTTCCTCTCGGGCATGCCCAAGCTGCGCCTGGGCCTC < 41bp 0.73304856735542 0.481007781809827 0.2574051 0.1683217 prediction 0.46609713471084 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16337307 chr19:16337310 nonsynonymous SNV 0.702 4 24 hm5C_associated_SNPs_73043 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:16337306-16337331
64251 chr5 138979986 138979986 1 + A T ESCA 138979982 + 138979962 138980002 41 GAATGATCTGGCACGGGACCCTCCAGCACAGTGTTCAGCAG GAATGATCTGGCACGGGACCCTCCTGCACAGTGTTCAGCAG < 41bp 0.756204638423533 0.523157669395345 0.94369245 0.065910816 prediction 0.466093938056375 Functional Loss - UBE2D2 ENSG00000131508 CDS Human protein_coding chr5:138979982 chr5:138979986 synonymous SNV . 0 25 hm5C_associated_SNPs_73045 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:138979954-138979988
64251 chr6 170201148 170201148 1 + G A UCEC 170201145 + 170201125 170201165 41 TGCTGGGGTTTCCCTCGTGTCTGGGAGGTGGTGTGCTTGGT TGCTGGGGTTTCCCTCGTGTCTGAGAGGTGGTGTGCTTGGT < 41bp 0.77999340771406 0.546948251999973 0.41540068 0.13408521 prediction 0.466090311428174 Functional Loss - LINC00574 ENSG00000231690 ncRNA_exonic Human lincRNA chr6:170201145 chr6:170201148 . . 0 24 hm5C_associated_SNPs_73046 0 0 1 AGGF1 POSTAR2 ENCODE chr6:170201131-170201203
64251 chr2 239002507 239002507 1 + G A BLCA 239002504 + 239002484 239002524 41 TTGTGTGTCTGCCCCCAGGCCGCGGAGCTGGTGACCCAGAA TTGTGTGTCTGCCCCCAGGCCGCAGAGCTGGTGACCCAGAA < 41bp 0.778162655953501 0.545119829532932 0.8342993 0.4193412 prediction 0.466085652841137 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:239002504 chr2:239002507 synonymous SNV . 0 24 hm5C_associated_SNPs_73047 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:239002466-239002512
64251 chr1 222802455 222802455 1 + A C UCEC 222802451 + 222802431 222802471 41 TCTTAAAACTCAAAACCAACCTAGATTCTCCTCTCCAGATG TCTTAAAACTCAAAACCAACCTAGCTTCTCCTCTCCAGATG < 41bp 0.733038443440093 0.340056166599927 0.05403152 0.049077243 prediction 0.466076886880187 Functional Loss - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222802451 chr1:222802455 nonsynonymous SNV 0.060 0 25 hm5C_associated_SNPs_73051 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:222802429-222802467
64251 chr10 114799852 114799852 1 + G T UCEC 114799849 + 114799829 114799869 41 CTCCAGAGTAGACAAGCCCTCAAGGATGCCCGGTCCCCATC CTCCAGAGTAGACAAGCCCTCAATGATGCCCGGTCCCCATC < 41bp 0.832959722561858 0.599937832121072 0.91922665 0.22589937 prediction 0.466043780881572 Functional Loss - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114799849 chr10:114799852 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_73057 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:114799825-114799853
64251 chr9 132397704 132397704 1 + C T LUAD 132397702 + 132397682 132397722 41 AGGAGAGGCAGGAGAACCTCCCCGATGAGATCTACCATGTC AGGAGAGGCAGGAGAACCTCCCTGATGAGATCTACCATGTC < 41bp 0.733018329275655 0.46317071515665 0.29348338 0.2636075 prediction 0.466036658551311 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397702 chr9:132397704 synonymous SNV . 0 23 hm5C_associated_SNPs_73058 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:132397703-132397704
64251 chr1 201835979 201835979 1 + G A UCEC 201835976 + 201835956 201835996 41 TCAGCTCAGAGGTCCTCAACCTGGTGATGGAGACCCTGTGC TCAGCTCAGAGGTCCTCAACCTGATGATGGAGACCCTGTGC < 41bp 0.757717040466527 0.524700038114808 0.5652755 0.2401962 prediction 0.466034004703437 Functional Loss - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201835976 chr1:201835979 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73059 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:201835952-201836041
64251 chr9 136891933 136891933 1 + A C rs549945474 136891932 + 136891912 136891952 41 GGCTACGCCCGCCTCCGGTACAGGGACACCTCCTTGCTCAT GGCTACGCCCGCCTCCGGTACCGGGACACCTCCTTGCTCAT < 41bp 0.73301585239846 0.471262082827501 0.9019557 0.91885436 prediction 0.466031704796921 Functional Loss - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136891932 chr9:136891933 . . 0 22 hm5C_associated_SNPs_73060 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:136891894-136891967
64251 chr9 131669896 131669896 1 + G A PAAD 131669893 + 131669873 131669913 41 TTCAAATTCCCGCGCACCAGCTCGAAGCTGGAGCACTTTGT TTCAAATTCCCGCGCACCAGCTCAAAGCTGGAGCACTTTGT < 41bp 0.765948704895241 0.532933094137819 0.40469116 0.14734322 prediction 0.466031221514843 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669893 chr9:131669896 synonymous SNV . 0 24 hm5C_associated_SNPs_73061 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131669876-131669907
64251 chr11 59540740 59540740 1 + G A UCEC 59540737 + 59540717 59540757 41 GTTGAGATTGCTATCGACAACACGGCTTTTATGGACGAGTT GTTGAGATTGCTATCGACAACACAGCTTTTATGGACGAGTT < 41bp 0.741389840713376 0.5083787132984 0.005301386 0.0071067214 prediction 0.466022254829952 Functional Loss - STX3 ENSG00000166900 CDS Human protein_coding chr11:59540737 chr11:59540740 synonymous SNV . 0 24 hm5C_associated_SNPs_73064 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:59540735-59540755
64251 chr8 56866484 56866484 1 + G A BLCA 56866481 + 56866461 56866501 41 TAAAGATGCCTGGGAGATCCCCCGGGAGTCCATCAAGTTGG TAAAGATGCCTGGGAGATCCCCCAGGAGTCCATCAAGTTGG < 41bp 0.76784893642044 0.534838041164386 0.15688372 0.02421999 prediction 0.466021790512108 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56866481 chr8:56866484 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_73065 0 0 2 LIN28B POSTAR2 ENCODE chr8:56866458-56866523
64251 chr11 60689458 60689458 1 + C T COAD 60689456 + 60689436 60689476 41 GTCGGTGCCTGACCCTTCCACCCGGGCCCTGCTACTCCTGG GTCGGTGCCTGACCCTTCCACCTGGGCCCTGCTACTCCTGG < 41bp 0.761743407856579 0.528735414546676 0.3270408 0.20622176 prediction 0.466015986619806 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689456 chr11:60689458 nonsynonymous SNV 0.873 2 23 hm5C_associated_SNPs_73068 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:60689440-60689475
64251 chr4 17585203 17585203 1 + C T CESC 17585201 + 17585181 17585221 41 CGGAGGGAGCGGTGCTTGGTCTCTATGAATACGATGACCTA CGGAGGGAGCGGTGCTTGGTCTTTATGAATACGATGACCTA < 41bp 0.850422530495774 0.617421979550733 0.9035154 0.073764354 prediction 0.466001101890083 Functional Loss - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17585201 chr4:17585203 synonymous SNV . 0 23 hm5C_associated_SNPs_73071 0 0 10 FXR2 POSTAR2 ENCODE chr4:17585115-17585216
64251 chr19 49633831 49633831 1 + C T SKCM 49633829 + 49633809 49633849 41 GGCAAGGCAGAGGAAGCCAACTCCAAGCTGCAGCGCGACCT GGCAAGGCAGAGGAAGCCAACTTCAAGCTGCAGCGCGACCT < 41bp 0.821964317220391 0.588967860112299 0.9378737 0.34240386 prediction 0.465992914216184 Functional Loss - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49633829 chr19:49633831 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_73073 0 0 1 PPIG POSTAR2 ENCODE chr19:49633686-49633849
64251 chr19 12903546 12903546 1 + G A KIRP 12903543 + 12903523 12903563 41 CCGCCGGCCTCCTCCGGGAGCAGGTGGCCCAGCTCAAACAG CCGCCGGCCTCCTCCGGGAGCAGATGGCCCAGCTCAAACAG < 41bp 0.758893733644025 0.525898063481799 0.85946655 0.7589245 prediction 0.465991340324452 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12903543 chr19:12903546 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73075 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:12903520-12903571
64251 chrX 150573488 150573488 1 + G T UCEC 150573485 + 150573465 150573505 41 GCCCTCTTTGTGTATGTGGCCTGGAATGAAGGCTCACGACA GCCCTCTTTGTGTATGTGGCCTGTAATGAAGGCTCACGACA < 41bp 0.91417778257162 0.681184942905208 0.31014264 0.13745219 prediction 0.465985679332824 Functional Loss - VMA21 ENSG00000160131 CDS Human protein_coding chrX:150573485 chrX:150573488 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73076 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:150573415-150573489
64251 chr14 37132609 37132609 1 + C T KIRC 37132607 + 37132587 37132627 41 AGCCCTATCACGGCGGCGGCCGCCAAGGTGCCCACGCCACC AGCCCTATCACGGCGGCGGCCGTCAAGGTGCCCACGCCACC < 41bp 0.813833655887054 0.580841208201272 0.896812 0.40607584 prediction 0.465984895371563 Functional Loss - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132607 chr14:37132609 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_73077 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr14:37132602-37132634
64251 chr6 43411736 43411736 1 + G A LUAD 43411733 + 43411713 43411753 41 AAGCCTGGGCTGAGAATGGACAAGAGTCTGACTCAGGTATG AAGCCTGGGCTGAGAATGGACAAAAGTCTGACTCAGGTATG < 41bp 0.773018280693515 0.540025983711619 0.7508707 0.42463943 prediction 0.465984593963792 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43411733 chr6:43411736 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_73078 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:43411712-43411736
64251 chr17 40812334 40812334 1 + G T UCEC 40812332 + 40812312 40812352 41 ACTGGGCCAGCGGATTCTCCCAGGTGTCCTAGCGACCATTC ACTGGGCCAGCGGATTCTCCCATGTGTCCTAGCGACCATTC < 41bp 0.797971867517519 0.564994537973322 0.9059969 0.0834648 prediction 0.465954659088394 Functional Loss - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40812332 chr17:40812334 nonsynonymous SNV 0.963 1 23 hm5C_associated_SNPs_73088 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40812327-40812361
64251 chr1 46740259 46740259 1 + T C UCEC 46740258 + 46740238 46740278 41 GCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAAC GCAAAGCTGGGGGCTGTGGCCCCAATCTCATTGGGGCTAAC < 41bp 0.818151089179124 0.585174462268459 0.85856926 0.5666747 prediction 0.465953253821328 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46740258 chr1:46740259 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_73089 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:46740247-46740270
64251 chr19 7987347 7987347 1 + G A READ 7987344 + 7987324 7987364 41 CACTAGAGTCCGCTGTGGTCCTCGACCTGCTCATGTCACTT CACTAGAGTCCGCTGTGGTCCTCAACCTGCTCATGTCACTT < 41bp 0.753873051780115 0.520898475125946 0.33894145 0.23286134 prediction 0.465949153308338 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987344 chr19:7987347 nonsynonymous SNV 0.636 0 24 hm5C_associated_SNPs_73091 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7987336-7987358
64251 chr9 132642461 132642461 1 + A C COAD 132642457 + 132642437 132642477 41 ACAGCCTGTATGGAGGTGGCCCCGAGATTGCCATCCGCCAG ACAGCCTGTATGGAGGTGGCCCCGCGATTGCCATCCGCCAG < 41bp 0.732958932641153 0.33237776635407 0.25801787 0.7168506 prediction 0.465917865282305 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132642457 chr9:132642461 nonsynonymous SNV 0.158 4 25 hm5C_associated_SNPs_73100 0 0 1 FXR2 POSTAR2 ENCODE chr9:132642456-132642492
64251 chr7 98249103 98249103 1 + C T LUAD 98249101 + 98249081 98249121 41 TCCCTGCTGCACAATGAGACCTCGGCTCACCGGCAGAAGAC TCCCTGCTGCACAATGAGACCTTGGCTCACCGGCAGAAGAC < 41bp 0.817590965035858 0.58463766878094 0.1467528 0.13522208 prediction 0.465906592509836 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98249101 chr7:98249103 nonsynonymous SNV 0.954 1 23 hm5C_associated_SNPs_73104 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98249077-98249104
64251 chr22 18562773 18562773 1 + G A GBM 18562770 + 18562750 18562790 41 AAAAGCTACCCCCCAAAGTCCTGGAGCTGTGGTAAGTCTTC AAAAGCTACCCCCCAAAGTCCTGAAGCTGTGGTAAGTCTTC < 41bp 0.757352188308531 0.524402028353496 0.31216776 0.13263169 prediction 0.46590031991007 Functional Loss - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18562770 chr22:18562773 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_73106 0 0 2 GRWD1 POSTAR2 ENCODE chr22:18562636-18562800
64251 chr17 40762178 40762178 1 + G A BRCA 40762175 + 40762155 40762195 41 GCCGAGCATGGTATCAGCCCCGAGGGCATCGTGGAGGAGTT GCCGAGCATGGTATCAGCCCCGAAGGCATCGTGGAGGAGTT < 41bp 0.755000491341056 0.522068808472227 0.4180213 0.15451908 prediction 0.465863365737659 Functional Loss - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40762175 chr17:40762178 synonymous SNV . 0 24 hm5C_associated_SNPs_73121 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr17:40762160-40762180
64251 chr22 46685395 46685395 1 + C T UCEC 46685393 + 46685373 46685413 41 CTGAGGACGGGAACCCTGACCGCGTCCTGGAGCTGCTCCTG CTGAGGACGGGAACCCTGACCGTGTCCTGGAGCTGCTCCTG < 41bp 0.81398503682639 0.58106297533336 0.3876556 0.3209781 prediction 0.46584412298606 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46685393 chr22:46685395 synonymous SNV . 0 23 hm5C_associated_SNPs_73123 0 0 3 RPS3 POSTAR2 ENCODE chr22:46685314-46685404
64251 chr20 62641573 62641573 1 + T C LIHC 62641572 + 62641552 62641592 41 GCCCTCGAGCATGTTCCAAACTCGGTTCGCTTGTGGAAAGC GCCCTCGAGCATGTTCCAAACCCGGTTCGCTTGTGGAAAGC < 41bp 0.809813139667382 0.576893825605912 0.27002093 0.12386516 prediction 0.465838628122941 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62641572 chr20:62641573 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_73127 0 0 2 BUD13 POSTAR2 ENCODE chr20:62641550-62641579
64251 chr2 238002771 238002771 1 + G A STAD 238002768 + 238002748 238002788 41 GCGCCTTTGCCCTGGTCTCTCAAGCGTATACTTCAATCATC GCGCCTTTGCCCTGGTCTCTCAAACGTATACTTCAATCATC < 41bp 0.772789220033454 0.539872732954789 0.648703 0.23642555 prediction 0.465832974157329 Functional Loss - COPS8 ENSG00000198612 CDS Human protein_coding chr2:238002768 chr2:238002771 nonsynonymous SNV 0.516 2 24 hm5C_associated_SNPs_73129 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr2:238002748-238002771
64251 chr19 2873531 2873531 1 + C T COAD 2873529 + 2873509 2873549 41 GAAGACGTGGTTGTGGATTTCACGCTGGAGGAGTGGGCCTT GAAGACGTGGTTGTGGATTTCATGCTGGAGGAGTGGGCCTT < 41bp 0.732915580515735 0.457067033994406 0.2743673 0.23260337 prediction 0.46583116103147 Functional Loss - ZNF556 ENSG00000172000 CDS Human protein_coding chr19:2873529 chr19:2873531 nonsynonymous SNV 0.015 3 23 hm5C_associated_SNPs_73130 0 0 2 GRWD1 POSTAR2 ENCODE chr19:2873504-2873635
64251 chr19 2873532 2873532 1 + G T GBM 2873529 + 2873509 2873549 41 GAAGACGTGGTTGTGGATTTCACGCTGGAGGAGTGGGCCTT GAAGACGTGGTTGTGGATTTCACTCTGGAGGAGTGGGCCTT < 41bp 0.732915580515735 0.331018796873834 0.2743673 0.1594094 prediction 0.46583116103147 Functional Loss - ZNF556 ENSG00000172000 CDS Human protein_coding chr19:2873529 chr19:2873532 synonymous SNV . 0 24 hm5C_associated_SNPs_73131 0 0 2 GRWD1 POSTAR2 ENCODE chr19:2873504-2873635
64251 chr4 3447852 3447852 1 + A T LIHC 3447848 + 3447828 3447868 41 TCCCCGGGGCGCCAGGCCTGCGGCAGGAGGCACAAGAAGAG TCCCCGGGGCGCCAGGCCTGCGGCTGGAGGCACAAGAAGAG < 41bp 0.87214790023515 0.63923356557105 0.7856152 0.7628405 prediction 0.4658286693282 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3447848 chr4:3447852 nonsynonymous SNV 0.922 3 25 hm5C_associated_SNPs_73132 0 0 2 GRWD1 POSTAR2 ENCODE chr4:3447784-3447854
64251 chr15 91500936 91500936 1 + G A LUAD 91500933 + 91500913 91500953 41 GCTGAGGTGGCCGCGGGGGGCTGGCATTCTGTGTGTGTGAG GCTGAGGTGGCCGCGGGGGGCTGACATTCTGTGTGTGTGAG < 41bp 0.732911613565003 0.490207397620844 0.3395294 0.25542617 prediction 0.465823227130006 Functional Loss - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91500933 chr15:91500936 stopgain 0.999 1 24 hm5C_associated_SNPs_73133 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585674 chr15:91500919-91500943
64251 chr9 117350190 117350190 1 + G T UCEC 117350187 + 117350167 117350207 41 CGGGCAGCCGAGAAGGTGTCCGAGGCCCGCAAAAGTGAGTT CGGGCAGCCGAGAAGGTGTCCGATGCCCGCAAAAGTGAGTT < 41bp 0.913866935984474 0.680977611580986 0.81099117 0.47822443 prediction 0.465778648806977 Functional Loss - ATP6V1G1 ENSG00000136888 CDS Human protein_coding chr9:117350187 chr9:117350190 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_73141 0 0 8 DDX3X POSTAR2 ENCODE chr9:117350044-117350194
64251 chr1 151020407 151020407 1 + G T UCEC 151020404 + 151020384 151020424 41 GCGGGGGCCCAAGGCCTGACCCAGACTCCGACCGAAATGCA GCGGGGGCCCAAGGCCTGACCCATACTCCGACCGAAATGCA < 41bp 0.732873933588353 0.33776025563528 0.34325632 0.30891943 prediction 0.465747867176705 Functional Loss - C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020404 chr1:151020407 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_73151 0 0 1 DDX3X POSTAR2 ENCODE chr1:151020364-151020410
64251 chr12 51325582 51325582 1 + A C rs539284466 51325581 + 51325561 51325601 41 CGGTCTTGAACTCCTGGGCTCAAGTGATTCTCCCACCTTGA CGGTCTTGAACTCCTGGGCTCCAGTGATTCTCCCACCTTGA < 41bp 0.732873320628055 0.488064155572835 0.3162946 0.21263984 prediction 0.46574664125611 Functional Loss - METTL7A ENSG00000185432 UTR3 Human protein_coding chr12:51325581 chr12:51325582 . . 0 22 hm5C_associated_SNPs_73153 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:51325551-51325608
64251 chr5 34929981 34929981 1 + C T UCEC 34929979 + 34929959 34929999 41 GCGACGCCAGCGAGGAGGAGCTCAAGAAGGCCTATCGGAAG GCGACGCCAGCGAGGAGGAGCTTAAGAAGGCCTATCGGAAG < 41bp 0.774954889620398 0.542083847324504 0.68357384 0.33688444 prediction 0.465742084591788 Functional Loss - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34929979 chr5:34929981 synonymous SNV . 0 23 hm5C_associated_SNPs_73155 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:34929980-34930000
64251 chr19 45912334 45912334 1 + G A BRCA 45912331 + 45912311 45912351 41 GGACCATGGCGCCTCAACAGCCAGAAGGAGCGAAGCCTCAG GGACCATGGCGCCTCAACAGCCAAAAGGAGCGAAGCCTCAG < 41bp 0.781152620830502 0.548286403094039 0.7726377 0.35416397 prediction 0.465732435472926 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45912331 chr19:45912334 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73156 0 0 1 UCHL5 POSTAR2 ENCODE chr19:45912201-45912344
64251 chr20 45353840 45353840 1 + C T SKCM 45353838 + 45353818 45353858 41 AGTTCCTGGTGGGCAGCCTGCTCCTGGGGGCTCTCCTCGCC AGTTCCTGGTGGGCAGCCTGCTTCTGGGGGCTCTCCTCGCC < 41bp 0.848706201717919 0.615843363218224 0.1492297 0.2116741 prediction 0.46572567699939 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353838 chr20:45353840 synonymous SNV . 0 23 hm5C_associated_SNPs_73158 0 0 4 DDX3X POSTAR2 ENCODE chr20:45353786-45353889
64251 chr9 80851322 80851322 1 + A T LUAD 80851318 + 80851298 80851338 41 GCGCGGCGGACTTCTTCTCCCACTACGAGTACCTGTGCGCG GCGCGGCGGACTTCTTCTCCCACTTCGAGTACCTGTGCGCG < 41bp 0.732858076839856 0.449234239092168 0.013796151 0.0165219 prediction 0.465716153679711 Functional Loss - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80851318 chr9:80851322 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_73161 0 0 5 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr9:80851298-80851324
64251 chrX 153663684 153663684 1 + G A UCEC 153663681 + 153663661 153663701 41 ACTGGTTTACCATGGAGCGCCTCGAAGTCCACAGCAATGGC ACTGGTTTACCATGGAGCGCCTCAAAGTCCACAGCAATGGC < 41bp 0.762397272935713 0.529542427014355 0.55303776 0.90079784 prediction 0.465709691842714 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663681 chrX:153663684 nonsynonymous SNV 0.910 2 24 hm5C_associated_SNPs_73164 1 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:153663680-153663780
64251 chr17 40716853 40716853 1 + G A UCEC 40716850 + 40716830 40716870 41 TTGTCATTGACAGTGACCACCTGGGTCATCGGGCCTATGCC TTGTCATTGACAGTGACCACCTGAGTCATCGGGCCTATGCC < 41bp 0.780797258315179 0.54794982465633 0.7417244 0.35402238 prediction 0.465694867317699 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40716850 chr17:40716853 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_73168 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:40716814-40716858
64251 chr14 24767927 24767927 1 + A C rs186877859 24767923 + 24767903 24767943 41 CTCCGGAGTAGCTGCTGGGACTGCAGGAACGTGCCACCATG CTCCGGAGTAGCTGCTGGGACTGCCGGAACGTGCCACCATG < 41bp 0.732846845686254 0.352078556646906 0.55295855 0.28331357 prediction 0.465693691372508 Functional Loss - DHRS1 ENSG00000157379 intronic Human protein_coding chr14:24767923 chr14:24767927 . . 0 25 hm5C_associated_SNPs_73170 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:24767916-24767951
64251 chr19 1918142 1918142 1 + C T COAD 1918140 + 1918120 1918160 41 TCGCAGTTTACTGCGCCACCCTCGGCGTCAACCTCATTGCC TCGCAGTTTACTGCGCCACCCTTGGCGTCAACCTCATTGCC < 41bp 0.732845491679392 0.463957195747707 0.21391243 0.105710715 prediction 0.465690983358784 Functional Loss - SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1918140 chr19:1918142 synonymous SNV . 0 23 hm5C_associated_SNPs_73172 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:1918133-1918162
64251 chr10 74034918 74034918 1 + C T BLCA 74034916 + 74034896 74034936 41 ATCAAGAAGAAGCTGTACAGCTCGGAACAGCTGCTCATTGA ATCAAGAAGAAGCTGTACAGCTTGGAACAGCTGCTCATTGA < 41bp 0.814905521928912 0.582076060520646 0.21545851 0.13056064 prediction 0.465658922816531 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034916 chr10:74034918 nonsynonymous SNV 0.934 3 23 hm5C_associated_SNPs_73181 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:74034872-74034966
64251 chr19 14582448 14582448 1 + C T LUSC 14582446 + 14582426 14582466 41 CTGCCACCGCCCTTTGTGCCCACGCTGTCCGGCCGCACCGA CTGCCACCGCCCTTTGTGCCCATGCTGTCCGGCCGCACCGA < 41bp 0.732821774734454 0.493741639946687 0.18337736 0.19232902 prediction 0.465643549468908 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14582446 chr19:14582448 nonsynonymous SNV 0.361 1 23 hm5C_associated_SNPs_73183 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14582443-14582465
64251 chr22 40802205 40802205 1 + C T UCEC 40802203 + 40802183 40802223 41 TCCCGGGTGCTGTTCCAGCTCACGCTGGGCATGCTGCACCT TCCCGGGTGCTGTTCCAGCTCATGCTGGGCATGCTGCACCT < 41bp 0.818843170782732 0.586026878267728 0.18694934 0.20789346 prediction 0.465632585030009 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802203 chr22:40802205 nonsynonymous SNV 0.482 1 23 hm5C_associated_SNPs_73187 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:40802179-40802215
64251 chr1 154960758 154960758 1 + G A LUSC 154960755 + 154960735 154960775 41 CAGGGGGCATCGGCCCCACTCATGATGATGTGACCTTTGAG CAGGGGGCATCGGCCCCACTCATAATGATGTGACCTTTGAG < 41bp 0.780919695344844 0.548106552946847 0.420349 0.2582937 prediction 0.465626284795995 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960755 chr1:154960758 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_73190 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:154960717-154960759
64251 chr6 26020768 26020768 1 + A C rs145452674 26020767 + 26020747 26020787 41 GTCTACTGGTGGCAAGGCGCCACGCAAACAGTTGGCCACTA GTCTACTGGTGGCAAGGCGCCCCGCAAACAGTTGGCCACTA < 41bp 0.732805187724179 0.492210189569405 0.22742608 0.13461575 prediction 0.465610375448357 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020767 chr6:26020768 synonymous SNV . 0 22 hm5C_associated_SNPs_73195 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr6:26020747-26020770
64251 chr15 42092056 42092056 1 + T C LUSC 42092055 + 42092035 42092075 41 GGTGCTGGGAATTACAGTGTCTGGAGGCAGAGGACTTGCCT GGTGCTGGGAATTACAGTGTCCGGAGGCAGAGGACTTGCCT < 41bp 0.735194745449778 0.502392795027976 0.85438883 0.9103327 prediction 0.465603900843606 Functional Loss - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42092055 chr15:42092056 synonymous SNV . 0 22 hm5C_associated_SNPs_73196 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:42092049-42092074
64251 chr10 43612057 43612057 1 + G A STAD 43612054 + 43612034 43612074 41 GGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTG GGATCCAAAGTGGGAATTCCCTCAGAAGAACTTGGTTCTTG < 41bp 0.746680307061957 0.513884824006399 0.075849295 0.070774645 prediction 0.465590966111116 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43612054 chr10:43612057 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_73202 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:43612041-43612067
64251 chr9 127637392 127637392 1 + G T COAD 127637390 + 127637370 127637410 41 TAAAGGCTTTGAGAAGCCCACAGAAAATAGCAGCGCAGTGT TAAAGGCTTTGAGAAGCCCACATAAAATAGCAGCGCAGTGT < 41bp 0.732793927341539 0.394878790835568 0.47644836 0.093247235 prediction 0.465587854683078 Functional Loss - ARPC5L ENSG00000136950 CDS Human protein_coding chr9:127637390 chr9:127637392 stopgain 1.000 1 23 hm5C_associated_SNPs_73203 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:127637278-127637393
64251 chr4 83996452 83996452 1 + C T BLCA 83996450 + 83996430 83996470 41 TACATTTTTTTTCCCCTTAGCACGAGAAGCCCTGCCAACGT TACATTTTTTTTCCCCTTAGCATGAGAAGCCCTGCCAACGT < 41bp 0.79931179187766 0.566521481704136 0.34142286 0.41199133 prediction 0.465580620347047 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83996450 chr4:83996452 stopgain 0.898 1 23 hm5C_associated_SNPs_73207 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:83996452-83996453
64251 chr19 18685735 18685735 1 + C T SKCM 18685733 + 18685713 18685753 41 GTGGCATTATTGAGCCTTCTCTCCGCCAGCTTGCCCAGAAA GTGGCATTATTGAGCCTTCTCTTCGCCAGCTTGCCCAGAAA < 41bp 0.83522082408139 0.602430892158148 0.58955604 0.33871996 prediction 0.465579863846485 Functional Loss - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18685733 chr19:18685735 synonymous SNV . 0 23 hm5C_associated_SNPs_73208 0 0 46 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18685677-18685750
64251 chrX 47063094 47063094 1 + C T UCEC 47063092 + 47063072 47063112 41 CTTTTCCGGCCCTGGGATGTCACGGTGAGTAGGGTAGGAGG CTTTTCCGGCCCTGGGATGTCATGGTGAGTAGGGTAGGAGG < 41bp 0.810355126551605 0.577565907449989 0.74130434 0.69762284 prediction 0.465578438203232 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47063092 chrX:47063094 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_73210 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47063066-47063095
64251 chr1 240370405 240370405 1 + G T UCEC 240370403 + 240370383 240370423 41 GCCTCCTGTGGATGGGCTGCCAGGGCGTCCTCCATGCCCCC GCCTCCTGTGGATGGGCTGCCATGGCGTCCTCCATGCCCCC < 41bp 0.732786539816641 0.370368841049554 0.9281368 0.37666327 prediction 0.465573079633282 Functional Loss - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240370403 chr1:240370405 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_73214 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:240370377-240370405
64251 chr10 45480350 45480350 1 + G A rs35924448 45480347 + 45480327 45480367 41 GCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAG GCCAGAGGAGGCCCAAGTGCCGCACCCCCGGTGAGGCCCAG < 41bp 0.763180038764057 0.530406657945683 0.09359622 0.02991122 prediction 0.465546761636749 Functional Loss - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480347 chr10:45480350 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73218 0 0 1 PPIG POSTAR2 ENCODE chr10:45480253-45480410
64251 chr8 145133745 145133745 1 + G T rs143107280 145133742 + 145133722 145133762 41 GTGTTCGCGCAGGCTGACGGCTCGGCCTACATTGAGCAGGG GTGTTCGCGCAGGCTGACGGCTCTGCCTACATTGAGCAGGG < 41bp 0.732771258185087 0.348718847987178 0.09309903 0.1201607 prediction 0.465542516370174 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145133742 chr8:145133745 synonymous SNV . 0 24 hm5C_associated_SNPs_73219 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:145133724-145133759
64251 chr3 129221680 129221680 1 + C T SKCM 129221678 + 129221658 129221698 41 CCTACCTGAAGATGGGTGACCTCAAGTCCCTGGTGCAGCTG CCTACCTGAAGATGGGTGACCTTAAGTCCCTGGTGCAGCTG < 41bp 0.831256572828483 0.598486059034938 0.8929898 0.7619822 prediction 0.46554102758709 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129221678 chr3:129221680 synonymous SNV . 0 23 hm5C_associated_SNPs_73220 0 0 1 PPIG POSTAR2 ENCODE chr3:129221661-129221746
64251 chr6 27220676 27220676 1 + T C LIHC 27220675 + 27220655 27220695 41 GAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGT GAGCACAGAACCTCAACTGTCCGGTGTGGGTGACCGGCAGT < 41bp 0.750961113928224 0.518192881480395 0.481602 0.7019218 prediction 0.465536464895657 Functional Loss - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27220675 chr6:27220676 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_73222 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:27220658-27220690
64251 chrX 102192923 102192923 1 + C T UCEC 102192921 + 102192901 102192941 41 AGAAGCCACCTCAAGTCCTTCTCCATGGCTAAGGGCCTGAA AGAAGCCACCTCAAGTCCTTCTTCATGGCTAAGGGCCTGAA < 41bp 0.823021167311616 0.590254250249262 0.95082164 0.23570365 prediction 0.465533834124707 Functional Loss - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192921 chrX:102192923 nonsynonymous SNV 0.857 2 23 hm5C_associated_SNPs_73223 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:102192893-102192931
64251 chr6 13977525 13977525 1 + C T UCEC 13977523 + 13977503 13977543 41 CATAGACTTTGGGGACTCCCCACAAGGTGTCATTGTCTGTC CATAGACTTTGGGGACTCCCCATAAGGTGTCATTGTCTGTC < 41bp 0.839206712892058 0.60643998330088 0.11983749 0.17799002 prediction 0.465533459182356 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977523 chr6:13977525 stopgain 0.994 0 23 hm5C_associated_SNPs_73224 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977461-13977549
64251 chr17 39847059 39847059 1 + T C ACC 39847058 + 39847038 39847078 41 GACTGGCTAAGGACGATCAGCTGAAGGTTCATGGGTTTTAA GACTGGCTAAGGACGATCAGCCGAAGGTTCATGGGTTTTAA < 41bp 0.732764331069758 0.49658881520227 0.7006889 0.4933964 prediction 0.465528662139516 Functional Loss - EIF1 ENSG00000173812 CDS Human protein_coding chr17:39847058 chr17:39847059 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_73226 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:39847022-39847067
64251 chr1 193053764 193053764 1 + C T SKCM 193053762 + 193053742 193053782 41 GGAATGACATCAAATGGTTTCACCATTGCAGACCCAGATGA GGAATGACATCAAATGGTTTCATCATTGCAGACCCAGATGA < 41bp 0.732758328460571 0.451338015199757 0.051662713 0.055033237 prediction 0.465516656921141 Functional Loss - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193053762 chr1:193053764 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_73235 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:193053710-193053766
64251 chr5 135170424 135170424 1 + G C rs191890954 135170420 + 135170400 135170440 41 TGGGTTTGGAGTAGGACCTGCGGCGTGCTCGAGACTCCGAC TGGGTTTGGAGTAGGACCTGCGGCCTGCTCGAGACTCCGAC < 41bp 0.732749375887398 0.455307298333656 0.89239824 0.85323775 prediction 0.465498751774796 Functional Loss - SLC25A48 ENSG00000145832 UTR5 Human protein_coding chr5:135170420 chr5:135170424 . . 0 25 hm5C_associated_SNPs_73243 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr5:135170420-135170440
64251 chr20 55101089 55101089 1 + C T UCEC 55101087 + 55101067 55101107 41 CCTGCAGATCCATACCATGTCACGATCTGTGAAATATGGGG CCTGCAGATCCATACCATGTCATGATCTGTGAAATATGGGG < 41bp 0.803988319418446 0.571252651576272 0.27288106 0.33737087 prediction 0.465471335684349 Functional Loss - FAM209A ENSG00000124103 CDS Human protein_coding chr20:55101087 chr20:55101089 nonsynonymous SNV 0.001 4 23 hm5C_associated_SNPs_73250 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr20:55101078-55101099
64251 chr1 11896114 11896114 1 + G A rs368128231 11896111 + 11896091 11896131 41 CTGGTGAGCATCCTGCGCACCACGGTCCACCATGCCTTCCC CTGGTGAGCATCCTGCGCACCACAGTCCACCATGCCTTCCC < 41bp 0.761369013747868 0.52863438915168 0.03539124 0.020571947 prediction 0.465469249192376 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11896111 chr1:11896114 synonymous SNV . 0 24 hm5C_associated_SNPs_73251 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:11896031-11896118
64251 chr17 79073865 79073865 1 + G A CESC 79073862 + 79073842 79073882 41 TGCGCCGTGGCCAAGAACTCCGCGGCCTACCACTCCAAGGT TGCGCCGTGGCCAAGAACTCCGCAGCCTACCACTCCAAGGT < 41bp 0.764865918419018 0.53214018810928 0.88551056 0.80952215 prediction 0.465451460619477 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79073862 chr17:79073865 synonymous SNV . 0 24 hm5C_associated_SNPs_73254 0 0 3 BUD13 POSTAR2 ENCODE chr17:79073798-79073906
64251 chr6 33636907 33636907 1 + C T rs2077163 33636905 + 33636885 33636925 41 AGGCGCGGGCCGGCAACGCCCACGACGAGAATGTGCTCAGC AGGCGCGGGCCGGCAACGCCCATGACGAGAATGTGCTCAGC < 41bp 0.789468861753599 0.556743815518998 0.24566266 0.3531308 prediction 0.465450092469202 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33636905 chr6:33636907 synonymous SNV . 0 23 hm5C_associated_SNPs_73255 0 0 1 UCHL5 POSTAR2 ENCODE chr6:33636869-33636911
64251 chr11 32611116 32611116 1 + G T UCEC 32611113 + 32611093 32611133 41 GTTAGAAAATGGATTTCTGACTGGAATCTCACCACTGAAAA GTTAGAAAATGGATTTCTGACTGTAATCTCACCACTGAAAA < 41bp 0.905861682357903 0.673138712561507 0.2079812 0.16131279 prediction 0.465445939592791 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32611113 chr11:32611116 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73256 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32611095-32611131
64251 chr19 39868164 39868164 1 + G T BLCA 39868161 + 39868141 39868181 41 GGAACCTACGAAACGCTCTGCAGGAGCTGCAGCAGATCATC GGAACCTACGAAACGCTCTGCAGTAGCTGCAGCAGATCATC < 41bp 0.732708500417122 0.324830676454853 0.68312085 0.2279371 prediction 0.465417000834245 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868161 chr19:39868164 stopgain 1.000 1 24 hm5C_associated_SNPs_73267 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39868136-39868172
64251 chr14 32560563 32560563 1 + C T COAD 32560561 + 32560541 32560581 41 TCTTGTAGTGGAAACATCAGCACGATTTAATGTCAACATTG TCTTGTAGTGGAAACATCAGCATGATTTAATGTCAACATTG < 41bp 0.732701810571775 0.471284137799725 0.20017403 0.1957649 prediction 0.465403621143549 Functional Loss - ARHGAP5 ENSG00000100852 CDS Human protein_coding chr14:32560561 chr14:32560563 stopgain 1.000 1 23 hm5C_associated_SNPs_73272 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:32560527-32560563
64251 chr17 34854983 34854983 1 - C T UCEC 34854986 - 34854966 34855006 41 AGCCATTCGTTCCTGGTTAACTCGGAAACACATCCAGAGGC AGCCATTCGTTCCTGGTTAACTCAGAAACACATCCAGAGGC < 41bp 0.732690904536968 0.494395787257949 0.22625437 0.18577391 prediction 0.465381809073936 Functional Loss - MYO19 ENSG00000141140 CDS Human other chr17:34854986 chr17:34854983 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_73277 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:34854959-34855020
64251 chr11 65272006 65272006 1 + G T LUAD 65272004 + 65271984 65272024 41 GCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGTA GCTGAGTGTTGAGGAAATTTCTTCAGTTTTAAGCAGTCGTA < 41bp 0.732689653409144 0.477144401647188 0.2225833 0.09593049 prediction 0.465379306818289 Functional Loss - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272004 chr11:65272006 . . 0 23 hm5C_associated_SNPs_73278 0 0 113 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65271900-65272140
64251 chr20 49197898 49197898 1 + C T UCEC 49197896 + 49197876 49197916 41 CCAAAGGGGAGCCGTCACTGCCCGAGAAGGACGAGGACCAT CCAAAGGGGAGCCGTCACTGCCTGAGAAGGACGAGGACCAT < 41bp 0.823424349889236 0.590740992808825 0.3298102 0.27624547 prediction 0.465366714160821 Functional Loss - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197896 chr20:49197898 synonymous SNV . 0 23 hm5C_associated_SNPs_73281 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:49197879-49197927
64251 chr16 57416298 57416298 1 + C T STAD 57416296 + 57416276 57416316 41 CAGGATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAGTGCC CAGGATGGAGGGCCTGTGGGCATGGAGCTTTTCCGAGTGCC < 41bp 0.751206304704152 0.518530444363706 0.31843948 0.26712057 prediction 0.465351720680891 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416296 chr16:57416298 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_73284 0 0 2 SND1 POSTAR2 ENCODE chr16:57416268-57416304
64251 chr16 90001180 90001180 1 + G A UCEC 90001177 + 90001157 90001197 41 AACTGGGCCAAGGGTCACTACACGGAGGGGGCGGAGCTGGT AACTGGGCCAAGGGTCACTACACAGAGGGGGCGGAGCTGGT < 41bp 0.758595602192812 0.525920388999287 0.8702992 0.40699703 prediction 0.465350426387051 Functional Loss - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001177 chr16:90001180 synonymous SNV . 0 24 hm5C_associated_SNPs_73285 0 0 2 RBM15 POSTAR2 ENCODE chr16:90001064-90001260
64251 chr4 15004876 15004876 1 + G A rs146101385 15004873 + 15004853 15004893 41 CACCTTCCCCACCCTCCGGACTCGAAGCCGCCGCCGCCGCC CACCTTCCCCACCCTCCGGACTCAAAGCCGCCGCCGCCGCC < 41bp 0.766692499663017 0.534021067078981 0.59107894 0.06629336 prediction 0.465342865168072 Functional Loss - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15004873 chr4:15004876 synonymous SNV . 0 24 hm5C_associated_SNPs_73286 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:15004847-15004876
64251 chr1 15986540 15986540 1 + A C rs34830712 15986536 + 15986516 15986556 41 AGCTGTGAAGGCTTTGAAGGCTTCAGCTGAATTCCAGCTAA AGCTGTGAAGGCTTTGAAGGCTTCCGCTGAATTCCAGCTAA < 41bp 0.732660724287252 0.320112379614486 0.07743055 0.061410815 prediction 0.465321448574504 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15986536 chr1:15986540 synonymous SNV . 0 25 hm5C_associated_SNPs_73291 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:15986511-15986558
64251 chr1 9667766 9667766 1 + C T UCEC 9667764 + 9667744 9667784 41 CCAGCAGCTCTTCCGGTCTCCTCGACGGACCTCACCCTCCT CCAGCAGCTCTTCCGGTCTCCTTGACGGACCTCACCCTCCT < 41bp 0.803728819553075 0.571084871968541 0.86144316 0.24980745 prediction 0.465287895169066 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9667764 chr1:9667766 stopgain 0.986 1 23 hm5C_associated_SNPs_73298 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:9667750-9667789
64251 chr3 25611265 25611265 1 + G T COAD 25611262 + 25611242 25611282 41 TTTCCAGCTGTCAGGAATGACAGGAACAAGAAAAAGAAGGA TTTCCAGCTGTCAGGAATGACAGTAACAAGAAAAAGAAGGA < 41bp 0.732638785561439 0.357497162707991 0.74947786 0.15677032 prediction 0.465277571122879 Functional Loss - RARB ENSG00000077092 CDS Human protein_coding chr3:25611262 chr3:25611265 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73302 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr3:25611253-25611286
64251 chr7 2701826 2701826 1 + G A rs55930249 2701823 + 2701803 2701843 41 GCCTGCTGGCCACTGAGGGACAGGGACACGTGCCACCTGCT GCCTGCTGGCCACTGAGGGACAGAGACACGTGCCACCTGCT < 41bp 0.76874685019751 0.536111420464503 0.93431795 0.853487 prediction 0.465270859466014 Functional Loss - TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2701823 chr7:2701826 . . 0 24 hm5C_associated_SNPs_73304 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2701702-2701850
64251 chr7 29923986 29923986 1 + G C COAD 29923985 + 29923965 29924005 41 TGCGCAGGAGCCTCCCGCCCCGCCGCCCCCGCTCCCCCCTT TGCGCAGGAGCCTCCCGCCCCCCCGCCCCCGCTCCCCCCTT < 41bp 0.732628999837954 0.411206193859739 0.1302993 0.11255571 prediction 0.465257999675907 Functional Loss - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29923985 chr7:29923986 synonymous SNV . 0 22 hm5C_associated_SNPs_73306 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:29923972-29924004
64251 chr20 61467613 61467613 1 + C T rs76559905 61467611 + 61467591 61467631 41 CCAGCGGTGTTCAGGGTGTCCCCGGGCCCCCCGGTCCTCTG CCAGCGGTGTTCAGGGTGTCCCTGGGCCCCCCGGTCCTCTG < 41bp 0.765147115341898 0.532522448555863 0.89820087 0.42013878 prediction 0.465249333572069 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467611 chr20:61467613 synonymous SNV . 0 23 hm5C_associated_SNPs_73309 2 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:61467606-61467638
64251 chr13 114150007 114150007 1 + C T rs112476446 114150005 + 114149985 114150025 41 AGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCC AGCGTGTGATCAAACTGCACCGTGGGCGAGGGGTGGCTGCC < 41bp 0.816095278510654 0.583473437373997 0.19739261 0.10178116 prediction 0.465243682273313 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150005 chr13:114150007 synonymous SNV . 0 23 hm5C_associated_SNPs_73312 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114150006-114150036
64251 chr19 16625435 16625435 1 + G A UCEC 16625432 + 16625412 16625452 41 TCCCTCCTGCGCTCCCTGGACGCGGACTCCTTCCACTACCA TCCCTCCTGCGCTCCCTGGACGCAGACTCCTTCCACTACCA < 41bp 0.780757578601393 0.548139966167009 0.1772787 0.077293396 prediction 0.465235224868769 Functional Loss - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16625432 chr19:16625435 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_73314 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:16625422-16625458
64251 chr2 120714440 120714440 1 + T C UCEC 120714439 + 120714419 120714459 41 GCAACTGTATCGGAAAAAACCTGGAATGACAATGTCCTGTG GCAACTGTATCGGAAAAAACCCGGAATGACAATGTCCTGTG < 41bp 0.746495018881027 0.513883614742268 0.612147 0.5580793 prediction 0.465222808277519 Functional Loss - PTPN4 ENSG00000088179 CDS Human protein_coding chr2:120714439 chr2:120714440 synonymous SNV . 0 22 hm5C_associated_SNPs_73317 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:120714420-120714443
64251 chr6 149700237 149700237 1 + G T UCEC 149700235 + 149700215 149700255 41 TATTTCAGCGAATGCTGCCACAGGAGATGAACAGGTCATGC TATTTCAGCGAATGCTGCCACATGAGATGAACAGGTCATGC < 41bp 0.886569236311295 0.653958787674088 0.79634875 0.3193087 prediction 0.465220897274414 Functional Loss - TAB2 ENSG00000055208 CDS Human protein_coding chr6:149700235 chr6:149700237 stopgain 0.997 1 23 hm5C_associated_SNPs_73318 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:149700220-149700262
64251 chr18 13057601 13057601 1 + G C BLCA 13057600 + 13057580 13057620 41 CCAGGGAGTGTCCGAGTGCCCGAGGAGTTGAAGCTTCCTCA CCAGGGAGTGTCCGAGTGCCCCAGGAGTTGAAGCTTCCTCA < 41bp 0.732594299529963 0.435688126288135 0.8850844 0.81126726 prediction 0.465188599059925 Functional Loss - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13057600 chr18:13057601 nonsynonymous SNV 0.224 3 22 hm5C_associated_SNPs_73323 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr18:13057582-13057603
64251 chr7 106508556 106508556 1 + C T HNSC 106508554 + 106508534 106508574 41 GCGCCGTGGCTTGGTGACCCCGCGCATGGCGGAGGTGGCCA GCGCCGTGGCTTGGTGACCCCGTGCATGGCGGAGGTGGCCA < 41bp 0.822098834672281 0.589507001234414 0.24454468 0.23362032 prediction 0.465183666875734 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508554 chr7:106508556 nonsynonymous SNV 0.490 0 23 hm5C_associated_SNPs_73324 0 0 4 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr7 150731483 150731483 1 + A C rs140819512 150731482 + 150731462 150731502 41 ATGACTGAGTCCCAGAATCTCAGCACCCACCTGCTTATCCT ATGACTGAGTCCCAGAATCTCCGCACCCACCTGCTTATCCT < 41bp 0.732591077656334 0.475051401504115 0.37746373 0.17844167 prediction 0.465182155312668 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150731482 chr7:150731483 nonsynonymous SNV 0.016 2 22 hm5C_associated_SNPs_73325 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150731451-150731489
64251 chr7 65554141 65554141 1 + G A ACC 65554138 + 65554118 65554158 41 AGTTTGGAGCTGATCCGGAGCAAGGCTGGGCGTGTGTTTGG AGTTTGGAGCTGATCCGGAGCAAAGCTGGGCGTGTGTTTGG < 41bp 0.732580949691506 0.488449061342148 0.49040902 0.38085127 prediction 0.465161899383011 Functional Loss - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65554138 chr7:65554141 synonymous SNV . 0 24 hm5C_associated_SNPs_73334 0 0 3 GRWD1 POSTAR2 ENCODE chr7:65554119-65554145
64251 chr10 135126329 135126329 1 + C T UCEC 135126327 + 135126307 135126347 41 CTGCTTTGGTCAGGGTGCCGCTCGAGGATTTAAAAGCAACA CTGCTTTGGTCAGGGTGCCGCTTGAGGATTTAAAAGCAACA < 41bp 0.758775372872198 0.526197645845059 0.29120076 0.2665963 prediction 0.465155454054279 Functional Loss - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135126327 chr10:135126329 stopgain 0.577 0 23 hm5C_associated_SNPs_73336 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:135126291-135126344
64251 chr22 42299073 42299073 1 + G A UCEC 42299070 + 42299050 42299090 41 AGGCTGTGGGGGAGACCTACCACGCGTCAGGCGCTGAACTG AGGCTGTGGGGGAGACCTACCACACGTCAGGCGCTGAACTG < 41bp 0.756070790437674 0.52349817868295 0.56794965 0.2339718 prediction 0.465145223509448 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42299070 chr22:42299073 nonsynonymous SNV 0.412 4 24 hm5C_associated_SNPs_73337 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr22:42299060-42299080
64251 chr19 19162542 19162542 1 + G A STAD 19162539 + 19162519 19162559 41 AGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCC AGGACAAGGCCTGCCGCTTCCTCACGGCCCAGAAGGGGGCC < 41bp 0.769970837093617 0.537403091843621 0.11305931 0.05085358 prediction 0.465135490499992 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19162539 chr19:19162542 nonsynonymous SNV 0.541 4 24 hm5C_associated_SNPs_73340 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:19162540-19162560
64251 chr17 57288827 57288827 1 + G T UCEC 57288824 + 57288804 57288844 41 AGAGGACTTGGGGTCACCCACTGGAGAGCTAACATCTAAGA AGAGGACTTGGGGTCACCCACTGTAGAGCTAACATCTAAGA < 41bp 0.915200714968561 0.682636807749608 0.43818212 0.16846985 prediction 0.465127814437905 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57288824 chr17:57288827 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_73341 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57288799-57288846
64251 chr8 23117745 23117745 1 + C T UCEC 23117743 + 23117723 23117763 41 TGGATCTGCCTGACAACCCCCGCAATAGGCATTTTACCAAC TGGATCTGCCTGACAACCCCCGTAATAGGCATTTTACCAAC < 41bp 0.732563000754326 0.435248305902975 0.15356904 0.19457081 prediction 0.465126001508651 Functional Loss - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23117743 chr8:23117745 synonymous SNV . 0 23 hm5C_associated_SNPs_73343 0 0 3 FUS POSTAR2 GSE43308,GSM1060381 chr8:23117740-23117760
64251 chr7 158695262 158695262 1 + G T UCEC 158695260 + 158695240 158695280 41 GTTTCAGAAGCGAGGTAGAACAGAATTTGAAAAGGAGCCCA GTTTCAGAAGCGAGGTAGAACATAATTTGAAAAGGAGCCCA < 41bp 0.732554824956921 0.402707463036356 0.3226878 0.2819931 prediction 0.465109649913841 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158695260 chr7:158695262 stopgain 0.003 1 23 hm5C_associated_SNPs_73349 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:158695241-158695262
64251 chr8 145247305 145247305 1 + G A UCEC 145247302 + 145247282 145247322 41 TCTTGGCTGCACTGCACTCCCAGGTAGGAGGCGGGCGTCAG TCTTGGCTGCACTGCACTCCCAGATAGGAGGCGGGCGTCAG < 41bp 0.744824195138225 0.512269765949442 0.8047462 0.46195698 prediction 0.465108858377568 Functional Loss - MROH1 ENSG00000179832 splicing Human protein_coding chr8:145247302 chr8:145247305 . 0.886 0 24 hm5C_associated_SNPs_73350 0 0 2 PRPF8 POSTAR2 ENCODE chr8:145247294-145247351
64251 chr4 3446112 3446112 1 + G A rs16844370 3446109 + 3446089 3446129 41 GGGCCCGCGTGCGCCAGGGCCACGTGGAACAGTGCGAGTGC GGGCCCGCGTGCGCCAGGGCCACATGGAACAGTGCGAGTGC < 41bp 0.779614598167803 0.547060234375247 0.80689585 0.45968142 prediction 0.465108727585113 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3446109 chr4:3446112 nonsynonymous SNV 0.112 4 24 hm5C_associated_SNPs_73351 0 0 2 PPIG POSTAR2 ENCODE chr4:3446053-3446146
64251 chr7 87005030 87005030 1 + C T READ 87005028 + 87005008 87005048 41 ATTAACTAGTGAGGAGCGAACTCGATGGGCTAAGGTTCTGA ATTAACTAGTGAGGAGCGAACTTGATGGGCTAAGGTTCTGA < 41bp 0.852610727109863 0.620065379574325 0.8776537 0.45370063 prediction 0.465090695071076 Functional Loss - CROT ENSG00000005469 CDS Human protein_coding chr7:87005028 chr7:87005030 stopgain 0.992 0 23 hm5C_associated_SNPs_73358 0 0 1 PPIG POSTAR2 ENCODE chr7:87004979-87005044
64251 chr3 14170992 14170992 1 + G A CESC 14170989 + 14170969 14171009 41 GGCTTCCTGGAACGGCTGAGCGAGACCTCGGGTGGGATGTT GGCTTCCTGGAACGGCTGAGCGAAACCTCGGGTGGGATGTT < 41bp 0.785686777203507 0.553147888220535 0.9054402 0.5679995 prediction 0.465077777965944 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14170989 chr3:14170992 synonymous SNV . 0 24 hm5C_associated_SNPs_73361 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:14170983-14171007
64251 chr19 42791817 42791817 1 + G T LGG 42791814 + 42791794 42791834 41 ACCGGACCGTCAGCAAGATCCTGGGCGAGTGGTGGTATGCC ACCGGACCGTCAGCAAGATCCTGTGCGAGTGGTGGTATGCC < 41bp 0.732537137877964 0.333567383175615 0.8727877 0.45744073 prediction 0.465074275755927 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791814 chr19:42791817 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73363 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:42791810-42791825
64251 chr15 41191372 41191372 1 + C T COAD 41191370 + 41191350 41191390 41 CTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAA CTGCTGATTGCCCTGAGCAGCATGGAGGTCCTCTACGTGAA < 41bp 0.732533740604844 0.475948845823076 0.33500582 0.29590616 prediction 0.465067481209688 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191370 chr15:41191372 nonsynonymous SNV 0.931 1 23 hm5C_associated_SNPs_73364 0 0 2 DHX30 POSTAR2 ENCODE chr15:41191332-41191387
64251 chr11 68704044 68704044 1 + G A LUAD 68704041 + 68704021 68704061 41 ACAGGGCCGGAAGAAGCCGGCTGGGAAGTCTCTGGCCTCTG ACAGGGCCGGAAGAAGCCGGCTGAGAAGTCTCTGGCCTCTG < 41bp 0.776681393597479 0.544147944306357 0.3092057 0.13962516 prediction 0.465066898582244 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68704041 chr11:68704044 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_73365 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68704026-68704057
64251 chr10 89717663 89717663 1 + G T UCEC 89717661 + 89717641 89717681 41 GAAGATATATTCCTCCAATTCAGGACCCACACGACGGGAAG GAAGATATATTCCTCCAATTCATGACCCACACGACGGGAAG < 41bp 0.892604093329503 0.660092077137079 0.75852597 0.034549385 prediction 0.465024032384849 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717661 chr10:89717663 stopgain 1.000 0 23 hm5C_associated_SNPs_73374 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:89717622-89717684
64251 chr17 17700014 17700014 1 + C T COAD 17700012 + 17699992 17700032 41 CGCAGCAGCAGCAGCAGCAACGCCAGTGGCAATGGGGGAGA CGCAGCAGCAGCAGCAGCAACGTCAGTGGCAATGGGGGAGA < 41bp 0.732509953572872 0.47831783414411 0.8731015 0.63130766 prediction 0.465019907145744 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17700012 chr17:17700014 nonsynonymous SNV 0.474 1 23 hm5C_associated_SNPs_73378 0 0 2 FXR2 POSTAR2 ENCODE chr17:17700009-17700080
64251 chr11 64129359 64129359 1 + G A UCEC 64129356 + 64129336 64129376 41 GTGCTCCCCTCCCTTCCCCCCTCGGATCGGGCCCGTGGCGC GTGCTCCCCTCCCTTCCCCCCTCAGATCGGGCCCGTGGCGC < 41bp 0.785637792539984 0.553131081523807 0.032287717 0.026703626 prediction 0.465013422032354 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64129356 chr11:64129359 nonsynonymous SNV 0.981 0 24 hm5C_associated_SNPs_73383 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:64129338-64129364
64251 chr22 40745955 40745955 1 + C T HNSC 40745953 + 40745933 40745973 41 TACGACATGATGTGATGGCTCACGTGCACACATTTGGCCAC TACGACATGATGTGATGGCTCATGTGCACACATTTGGCCAC < 41bp 0.833854940919203 0.601349073229236 0.20913693 0.23151541 prediction 0.465011735379934 Functional Loss - ADSL ENSG00000239900 CDS Human protein_coding chr22:40745953 chr22:40745955 synonymous SNV . 0 23 hm5C_associated_SNPs_73384 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:40745938-40745975
64251 chr19 41263354 41263354 1 + G T LUAD 41263352 + 41263332 41263372 41 GTCATCTTCAAGGAGGTCAGCAGCGCCACCAACGCCCTGCG GTCATCTTCAAGGAGGTCAGCATCGCCACCAACGCCCTGCG < 41bp 0.732505406001076 0.365256844486949 0.83390033 0.25858098 prediction 0.465010812002152 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41263352 chr19:41263354 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_73386 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:41263351-41263398
64251 chr3 158363516 158363516 1 + T C LUAD 158363515 + 158363495 158363535 41 TCACATTGATTCTGGGAAAACTACATTAACAGAACGAGTCC TCACATTGATTCTGGGAAAACCACATTAACAGAACGAGTCC < 41bp 0.759244780488926 0.526742310360406 0.94669163 0.2929616 prediction 0.465004940257039 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158363515 chr3:158363516 synonymous SNV . 0 22 hm5C_associated_SNPs_73390 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:158363499-158363541
64251 chr15 81046693 81046693 1 + C T rs146877484 81046691 + 81046671 81046711 41 GACTAAAACAGTTCATATCTCACGAACTTCCTAATTCCTGA GACTAAAACAGTTCATATCTCATGAACTTCCTAATTCCTGA < 41bp 0.73250028448943 0.461481468469906 0.09578508 0.06956178 prediction 0.465000568978859 Functional Loss - ABHD17C ENSG00000136379 CDS Human protein_coding chr15:81046691 chr15:81046693 synonymous SNV . 0 23 hm5C_associated_SNPs_73395 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr15:81046671-81046694
64251 chr15 81046694 81046694 1 + G T COAD 81046691 + 81046671 81046711 41 GACTAAAACAGTTCATATCTCACGAACTTCCTAATTCCTGA GACTAAAACAGTTCATATCTCACTAACTTCCTAATTCCTGA < 41bp 0.73250028448943 0.36836843100841 0.09578508 0.07521054 prediction 0.465000568978859 Functional Loss - ABHD17C ENSG00000136379 CDS Human protein_coding chr15:81046691 chr15:81046694 stopgain 0.982 1 24 hm5C_associated_SNPs_73396 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr15:81046671-81046694
64251 chr16 28890060 28890060 1 + G A HNSC 28890057 + 28890037 28890077 41 TTTTGGGGTGAGTGAGACCACGGGCCTCACCCCGGACCAAG TTTTGGGGTGAGTGAGACCACGGACCTCACCCCGGACCAAG < 41bp 0.770532651040379 0.53803870363407 0.88466334 0.79729277 prediction 0.464987894812618 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28890057 chr16:28890060 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_73401 0 0 1 SRSF1 POSTAR2 ENCODE chr16:28890034-28890138
64251 chr2 235950157 235950157 1 + G A rs143331239 235950154 + 235950134 235950174 41 AGCAAGCGCTCCTACAGTCTCTCGGAACTCTCCGTCCTCCA AGCAAGCGCTCCTACAGTCTCTCAGAACTCTCCGTCCTCCA < 41bp 0.791233859791637 0.558741505581567 0.26181424 0.10573313 prediction 0.46498470842014 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950154 chr2:235950157 synonymous SNV . 0 24 hm5C_associated_SNPs_73403 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr2:235950140-235950160
64251 chr16 46723645 46723645 1 + G A rs574592042 46723642 + 46723622 46723662 41 GGTCGGAGCTGATCGGGCGCCTAGCCCCGCGCCTGGGCCTC GGTCGGAGCTGATCGGGCGCCTAACCCCGCGCCTGGGCCTC < 41bp 0.732482131033998 0.487638538680287 0.6100704 0.5672076 prediction 0.464964262067995 Functional Loss - ORC6 ENSG00000091651 CDS Human protein_coding chr16:46723642 chr16:46723645 nonsynonymous SNV 0.011 4 24 hm5C_associated_SNPs_73406 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:46723600-46723660
64251 chrX 153672549 153672549 1 + G C rs781870554 153672548 + 153672528 153672568 41 GTCGCTGTCGCCGCCGCCGCCGCCCGCCGCCGCCGCCGCCG GTCGCTGTCGCCGCCGCCGCCCCCCGCCGCCGCCGCCGCCG < 41bp 0.784059273878884 0.551579722907469 0.7262707 0.27302444 prediction 0.464959101942829 Functional Loss - FAM50A ENSG00000071859 UTR5 Human protein_coding chrX:153672548 chrX:153672549 . . 0 22 hm5C_associated_SNPs_73408 0 0 10 DDX3X POSTAR2 ENCODE chrX:153672494-153672562
64251 chr6 28333312 28333312 1 + T C UCEC 28333311 + 28333291 28333331 41 AGAAGACATTGCCCAGATTCCTACATGTGCAGAAGCTGGTG AGAAGACATTGCCCAGATTCCCACATGTGCAGAAGCTGGTG < 41bp 0.774867799985675 0.542399200941262 0.91579497 0.77247053 prediction 0.464937198088826 Functional Loss - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333311 chr6:28333312 synonymous SNV . 0 22 hm5C_associated_SNPs_73411 0 0 1 PPIG POSTAR2 ENCODE chr6:28333211-28333384
64251 chr11 34156814 34156814 1 + G T BLCA 34156812 + 34156792 34156832 41 AAAAGGTCCTTGAGACACCACAGGAAATTCACACCGTAAGC AAAAGGTCCTTGAGACACCACATGAAATTCACACCGTAAGC < 41bp 0.732463931186662 0.381275031906777 0.6634542 0.14866117 prediction 0.464927862373324 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34156812 chr11:34156814 nonsynonymous SNV 0.128 0 23 hm5C_associated_SNPs_73415 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:34156800-34156827
64251 chr15 90809556 90809556 1 + G T UCEC 90809554 + 90809534 90809574 41 AGAAACAAGCAATCCGATTCCAGAAAATTCGGAGGCAAATG AGAAACAAGCAATCCGATTCCATAAAATTCGGAGGCAAATG < 41bp 0.789129423901625 0.556667352787171 0.82375294 0.31038305 prediction 0.464924142228909 Functional Loss - NGRN ENSG00000182768 CDS Human protein_coding chr15:90809554 chr15:90809556 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_73416 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr15:90809535-90809556
64251 chr9 35749850 35749850 1 + C T BLCA 35749848 + 35749828 35749868 41 GTCACCAACCCCCTTCCGCCCACGGCCACTTCTGCATCCAG GTCACCAACCCCCTTCCGCCCATGGCCACTTCTGCATCCAG < 41bp 0.770077439213246 0.537619382699063 0.09474796 0.06617957 prediction 0.464916113028367 Functional Loss - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35749848 chr9:35749850 nonsynonymous SNV 0.704 0 23 hm5C_associated_SNPs_73419 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:35749818-35749856
64251 chr17 7350169 7350169 1 + G A UCEC 7350166 + 7350146 7350186 41 CACTAGGAGTGGACTGACTACAGGCTGAGCTGGGACCCTGC CACTAGGAGTGGACTGACTACAGACTGAGCTGGGACCCTGC < 41bp 0.732454526298572 0.485713045672511 0.57867885 0.1503264 prediction 0.464909052597145 Functional Loss - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7350166 chr17:7350169 synonymous SNV . 0 24 hm5C_associated_SNPs_73420 0 0 1 PPIG POSTAR2 ENCODE chr17:7350151-7350253
64251 chr20 30193562 30193562 1 + G T CESC 30193560 + 30193540 30193580 41 CCCCCGGGGGCCGAGGGCTGCCGGTCCGGGCTCCGCTCAGC CCCCCGGGGGCCGAGGGCTGCCTGTCCGGGCTCCGCTCAGC < 41bp 0.73245408235782 0.372692417156333 0.3339268 0.041552663 prediction 0.464908164715639 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193560 chr20:30193562 synonymous SNV . 0 23 hm5C_associated_SNPs_73422 0 0 4 DDX6 POSTAR2 ENCODE chr20:30193532-30193582
64251 chr11 65417519 65417519 1 + G A ESCA 65417516 + 65417496 65417536 41 CCATTCTGGAGTCGCTGTCCCGAGAGGGTGAGGCCACCAGG CCATTCTGGAGTCGCTGTCCCGAAAGGGTGAGGCCACCAGG < 41bp 0.732449652623513 0.484141370793433 0.8948282 0.2943763 prediction 0.464899305247026 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65417516 chr11:65417519 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_73425 0 0 1 PPIG POSTAR2 ENCODE chr11:65417445-65417526
64251 chr17 42429583 42429583 1 + G T THCA 42429580 + 42429560 42429600 41 GGGCAGACCTGCTGCCCGAGCCTGGGTGGGAGCTGGGCCTG GGGCAGACCTGCTGCCCGAGCCTTGGTGGGAGCTGGGCCTG < 41bp 0.732440748766386 0.327204401241343 0.90398014 0.68852973 prediction 0.464881497532771 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42429580 chr17:42429583 synonymous SNV . 0 24 hm5C_associated_SNPs_73427 0 0 7 EFTUD2 POSTAR2 ENCODE chr17:42429560-42429608
64251 chr19 4429578 4429578 1 + C T UCEC 4429576 + 4429556 4429596 41 AAGAAGACGGCACTCATCCGCGCGCGAGACCCCTGGGCCCA AAGAAGACGGCACTCATCCGCGTGCGAGACCCCTGGGCCCA < 41bp 0.732435758113168 0.475975227217026 0.49736387 0.47779757 prediction 0.464871516226335 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4429576 chr19:4429578 nonsynonymous SNV 0.005 3 23 hm5C_associated_SNPs_73429 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:4429555-4429594
64251 chr1 150484918 150484918 1 + C T UCEC 150484916 + 150484896 150484936 41 CCGCCACCCTCCCAGCCCTACTCGGGATGAGTGCTTTGCCC CCGCCACCCTCCCAGCCCTACTTGGGATGAGTGCTTTGCCC < 41bp 0.828992920597758 0.596566306389896 0.41799662 0.35954213 prediction 0.464853228415724 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484916 chr1:150484918 nonsynonymous SNV 0.721 5 23 hm5C_associated_SNPs_73439 0 0 1 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr7 87506063 87506063 1 + A C STAD 87506062 + 87506042 87506082 41 ACTGCCATGAACTCCGGAGCCATGAGGATCCACAGTAAAGG ACTGCCATGAACTCCGGAGCCCTGAGGATCCACAGTAAAGG < 41bp 0.788578662110569 0.556152832267281 0.31327975 0.18494624 prediction 0.464851659686576 Functional Loss - DBF4 ENSG00000006634 CDS Human protein_coding chr7:87506062 chr7:87506063 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_73440 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:87506025-87506074
64251 chr17 7324499 7324499 1 + C T COAD 7324497 + 7324477 7324517 41 GGGGACCTGGGTTCCCTGGTCTCAGGATGCCCCAGAGTCCC GGGGACCTGGGTTCCCTGGTCTTAGGATGCCCCAGAGTCCC < 41bp 0.77942994513408 0.547010062463458 0.04292494 0.1162239 prediction 0.464839765341243 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324497 chr17:7324499 stopgain 0.023 0 23 hm5C_associated_SNPs_73444 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7324461-7324511
64251 chr13 113897351 113897351 1 + A C SKCM 113897350 + 113897330 113897370 41 GTCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCACGT GTCCAAGACCTGTTGGACTTCCAGGACAAGGTGGACCACGT < 41bp 0.781981669196763 0.549564604880682 0.5410608 0.58623147 prediction 0.464834128632163 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113897350 chr13:113897351 nonsynonymous SNV 0.928 2 22 hm5C_associated_SNPs_73448 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113897333-113897366
64251 chr3 3170829 3170829 1 + C T rs368274081 3170827 + 3170807 3170847 41 TCACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTC TCACAATGAAGTTGCAGTCTCCTGAATTCCAGTCACTTTTC < 41bp 0.834615934397391 0.602205086071807 0.12939945 0.068399906 prediction 0.464821696651169 Functional Loss - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3170827 chr3:3170829 synonymous SNV . 0 23 hm5C_associated_SNPs_73451 1 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:3170799-3170830
64251 chr20 43042366 43042366 1 + C T GBM 43042364 + 43042344 43042384 41 TGAGCGGGACCGGATCAGCACTCGAAGGTCAAGCTATGAGG TGAGCGGGACCGGATCAGCACTTGAAGGTCAAGCTATGAGG < 41bp 0.846353160020511 0.613945111695371 0.509585 0.10879168 prediction 0.46481609665028 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43042364 chr20:43042366 stopgain 0.287 1 23 hm5C_associated_SNPs_73454 0 0 6 BUD13 POSTAR2 ENCODE chr20:43042330-43042369
64251 chr6 30877747 30877747 1 + G T UCEC 30877745 + 30877725 30877765 41 ACAGGGCTGCTGAGCGGCCTCCGGATCTGGCACACACAGCT ACAGGGCTGCTGAGCGGCCTCCTGATCTGGCACACACAGCT < 41bp 0.848086715290471 0.615680369942766 0.8525281 0.17967495 prediction 0.464812690695411 Functional Loss - GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30877745 chr6:30877747 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_73456 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:30877721-30877750
64251 chr17 48560755 48560755 1 + G A rs200350428 48560752 + 48560732 48560772 41 TGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGC TGGAGGCCACACCCGGGAGGCTCAGATCCAGACACTGGAGC < 41bp 0.732385869015688 0.491603374657962 0.5343069 0.3531906 prediction 0.464771738031377 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560752 chr17:48560755 nonsynonymous SNV 0.811 2 24 hm5C_associated_SNPs_73464 0 0 7 BUD13 POSTAR2 ENCODE chr17:48560710-48560762
64251 chr14 76621204 76621204 1 + G T LUAD 76621202 + 76621182 76621222 41 GGTTCAAGTCTGCTAAGAAGCAGCGTCTGTCCCGCTGGAAG GGTTCAAGTCTGCTAAGAAGCATCGTCTGTCCCGCTGGAAG < 41bp 0.732381863386679 0.387186844642654 0.73343253 0.17022139 prediction 0.464763726773357 Functional Loss - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76621202 chr14:76621204 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_73467 0 0 2 EIF3H POSTAR2 ENCODE chr14:76621178-76621248
64251 chr22 41617260 41617260 1 + C T CESC 41617258 + 41617238 41617278 41 CTCATGAAACGGCTGGTGGGCTCCAGGACGCTTCCCGTGGA CTCATGAAACGGCTGGTGGGCTTCAGGACGCTTCCCGTGGA < 41bp 0.847635862675882 0.615265741115163 0.77878344 0.44850373 prediction 0.464740243121438 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41617258 chr22:41617260 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_73473 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:41617246-41617260
64251 chr3 43381920 43381920 1 + G A UCEC 43381917 + 43381897 43381937 41 CTTGTGTCATACAAAAATCTCTCGGAAGAGGAGCACAACAG CTTGTGTCATACAAAAATCTCTCAGAAGAGGAGCACAACAG < 41bp 0.74434479848748 0.511986968062094 0.027412891 0.035159618 prediction 0.464715660850772 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43381917 chr3:43381920 synonymous SNV . 0 24 hm5C_associated_SNPs_73480 0 0 1 ZNF622 POSTAR2 ENCODE chr3:43381817-43381943
64251 chr6 41754045 41754045 1 + G A COAD 41754042 + 41754022 41754062 41 GATGCAGGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGC GATGCAGGCTCGAGCTGGGCCGGAGCACTGGAAGGGCAGGC < 41bp 0.771807984151669 0.539452582192067 0.75692636 0.50726956 prediction 0.464710803919203 Functional Loss - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41754042 chr6:41754045 synonymous SNV . 0 24 hm5C_associated_SNPs_73482 0 0 1 EIF3H POSTAR2 ENCODE chr6:41753932-41754060
64251 chr16 772362 772362 1 + G A ESCA 772359 + 772339 772379 41 GAGCTGCCTGCTGGGGCCCGCGTGGTGTCTGGGCGCTTCCC GAGCTGCCTGCTGGGGCCCGCGTAGTGTCTGGGCGCTTCCC < 41bp 0.753344003161525 0.520994314439988 0.54694486 0.08638531 prediction 0.464699377443075 Functional Loss - FAM173A ENSG00000103254 CDS Human protein_coding chr16:772359 chr16:772362 synonymous SNV . 0 24 hm5C_associated_SNPs_73484 0 0 1 BUD13 POSTAR2 ENCODE chr16:772259-772363
64251 chr20 43034785 43034785 1 + C T COAD 43034783 + 43034763 43034803 41 GCCATCTGCGGGGACCGGGCCACGGGCAAACACTACGGTGC GCCATCTGCGGGGACCGGGCCATGGGCAAACACTACGGTGC < 41bp 0.813946755992135 0.581600600708247 0.8752329 0.6541406 prediction 0.464692310567776 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43034783 chr20:43034785 nonsynonymous SNV 0.706 5 23 hm5C_associated_SNPs_73486 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:43034780-43034839
64251 chr14 105926780 105926780 1 + C T SKCM 105926778 + 105926758 105926798 41 CATGAGCGCCGCAGCTGCCTCCCGAGACATCACCCTGGTAA CATGAGCGCCGCAGCTGCCTCCTGAGACATCACCCTGGTAA < 41bp 0.817903730380572 0.585558123426948 0.114349335 0.1452457 prediction 0.464691213907247 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105926778 chr14:105926780 stopgain 0.947 1 23 hm5C_associated_SNPs_73487 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105926738-105926783
64251 chr1 167666690 167666690 1 + G T UCEC 167666688 + 167666668 167666708 41 GGAGGTGGACGGCCAGCACCCGGCCCAAGAGGAGGTCCCGG GGAGGTGGACGGCCAGCACCCGTCCCAAGAGGAGGTCCCGG < 41bp 0.73234116887152 0.373890840668412 0.86890423 0.30001667 prediction 0.464682337743039 Functional Loss - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167666688 chr1:167666690 nonsynonymous SNV 0.002 3 23 hm5C_associated_SNPs_73489 0 0 2 UCHL5 POSTAR2 ENCODE chr1:167666644-167666709
64251 chr11 3847083 3847083 1 + G T rs76317697 3847081 + 3847061 3847101 41 ACCACAGCCATTTCTCTGCACGGGGGTCATTCATAGGACTA ACCACAGCCATTTCTCTGCACGTGGGTCATTCATAGGACTA < 41bp 0.732333776631543 0.41462613438403 0.874178 0.19268703 prediction 0.464667553263086 Functional Loss - PGAP2 ENSG00000148985 UTR3 Human protein_coding chr11:3847081 chr11:3847083 . . 0 23 hm5C_associated_SNPs_73495 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:3847057-3847089
64251 chrX 24483633 24483633 1 + C T LUSC 24483631 + 24483611 24483651 41 CAAGCAGATCGAGCGCTACTCGCGCTTTTCGCCGTCGCCGC CAAGCAGATCGAGCGCTACTCGTGCTTTTCGCCGTCGCCGC < 41bp 0.751905089977326 0.519573735974652 0.24922484 0.2573735 prediction 0.464662708005347 Functional Loss - PDK3 ENSG00000067992 CDS Human protein_coding chrX:24483631 chrX:24483633 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_73496 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:24483621-24483642
64251 chr20 47852933 47852933 1 + C T HNSC 47852931 + 47852911 47852951 41 CCACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCTGGGC CCACCGGGTGGGGCGAACAGCATGTGCTGGCAGGGCTGGGC < 41bp 0.825644323889888 0.593315738863667 0.3824783 0.31729636 prediction 0.464657170052441 Functional Loss - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47852931 chr20:47852933 nonsynonymous SNV 0.293 5 23 hm5C_associated_SNPs_73498 0 0 5 FXR2 POSTAR2 ENCODE chr20:47852905-47852960
64251 chr19 1220485 1220485 1 + C T SKCM 1220483 + 1220463 1220503 41 ACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGGCCGA ACCGGTGGCACCCTCAAAATCTTCGACCTGGGCGTGGCCGA < 41bp 0.821010489294992 0.588685617071388 0.21008378 0.06977081 prediction 0.464649744447208 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220483 chr19:1220485 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_73500 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:1220462-1220490
64251 chr3 141535803 141535803 1 + G T LUSC 141535801 + 141535781 141535821 41 GCAGGAAGAAATTATAGAAACGGGACTGTTTGAGGAACTGA GCAGGAAGAAATTATAGAAACGTGACTGTTTGAGGAACTGA < 41bp 0.887093872204548 0.654770326212312 0.44955012 0.28347337 prediction 0.464647091984471 Functional Loss - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141535801 chr3:141535803 stopgain 0.625 1 23 hm5C_associated_SNPs_73501 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:141535777-141535804
64251 chr1 87805280 87805280 1 + G A KIRC 87805277 + 87805257 87805297 41 AGTCGATTCCTGCGAGTGAACTCGTCATGAGGGCGCAAGGC AGTCGATTCCTGCGAGTGAACTCATCATGAGGGCGCAAGGC < 41bp 0.764046063734724 0.531725148721932 0.19480526 0.11110747 prediction 0.464641830025584 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805277 chr1:87805280 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_73504 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805221-87805288
64251 chr19 11558330 11558330 1 + C T SKCM 11558328 + 11558308 11558348 41 GAGGAGCAGCCGCCAGTGCCCTCGTCGCCCACAGAGGAGGA GAGGAGCAGCCGCCAGTGCCCTTGTCGCCCACAGAGGAGGA < 41bp 0.732319711463968 0.467590371381691 0.053569198 0.056352526 prediction 0.464639422927936 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11558328 chr19:11558330 nonsynonymous SNV 0.096 0 23 hm5C_associated_SNPs_73505 0 0 6 RPS3 POSTAR2 ENCODE chr19:11558254-11558339
64251 chr15 41672702 41672702 1 + A C rs76600371 41672701 + 41672681 41672721 41 CCTGCTGGTTCTAATATTAACAGAACTGCAGTCTTCTGCTA CCTGCTGGTTCTAATATTAACCGAACTGCAGTCTTCTGCTA < 41bp 0.742792699861595 0.510474455194921 0.69577056 0.25036097 prediction 0.464636489333348 Functional Loss - NUSAP1 ENSG00000137804 UTR3 Human protein_coding chr15:41672701 chr15:41672702 . . 0 22 hm5C_associated_SNPs_73506 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:41672658-41672774
64251 chr10 121436366 121436366 1 + G A OV 121436363 + 121436343 121436383 41 AAGCCATCCTGGAGAAGGTACAGGGGCTGGAGCAGGCTGTA AAGCCATCCTGGAGAAGGTACAGAGGCTGGAGCAGGCTGTA < 41bp 0.756930083791791 0.524612850898138 0.7389839 0.48585722 prediction 0.464634465787305 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436363 chr10:121436366 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_73507 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr10:121436362-121436384
64251 chr12 69652651 69652651 1 + C T BLCA 69652649 + 69652629 69652669 41 ACCTCCAGGCCCCTTTCCACCTCGTCCACCCGGTCCACTTG ACCTCCAGGCCCCTTTCCACCTTGTCCACCCGGTCCACTTG < 41bp 0.831468763761856 0.599152667143137 0.022673935 0.009869903 prediction 0.464632193237437 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652649 chr12:69652651 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_73509 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69652632-69652670
64251 chr2 86693766 86693766 1 + G T LUAD 86693764 + 86693744 86693784 41 TACAAAGGCTTCTTCTAAGGCAGAATTGGAAATTGCCAATC TACAAAGGCTTCTTCTAAGGCATAATTGGAAATTGCCAATC < 41bp 0.732313923829314 0.398401880651647 0.18307608 0.14244244 prediction 0.464627847658629 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86693764 chr2:86693766 stopgain 0.168 0 23 hm5C_associated_SNPs_73511 0 0 4 MTPAP POSTAR2 ENCODE chr2:86693694-86693771
64251 chr11 35198190 35198190 1 + C T SKCM 35198188 + 35198168 35198208 41 AAATGGTCGCTACAGCATCTCTCGGACGGAGGCCGCTGACC AAATGGTCGCTACAGCATCTCTTGGACGGAGGCCGCTGACC < 41bp 0.826954934481583 0.594641995741128 0.2165432 0.25103998 prediction 0.464625877480911 Functional Loss - CD44 ENSG00000026508 CDS Human protein_coding chr11:35198188 chr11:35198190 nonsynonymous SNV 0.937 3 23 hm5C_associated_SNPs_73513 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr11:35198180-35198200
64251 chr10 69647285 69647285 1 + C T UCEC 69647283 + 69647263 69647303 41 TAGTGACTGGACTCCAAGGCCACGGATAGGTATGGCTCAGA TAGTGACTGGACTCCAAGGCCATGGATAGGTATGGCTCAGA < 41bp 0.732306723757134 0.460619234768541 0.27004266 0.35563523 prediction 0.464613447514268 Functional Loss - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69647283 chr10:69647285 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_73518 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:69647257-69647288
64251 chr16 89294082 89294082 1 + G A rs142208886 89294079 + 89294059 89294099 41 GGGAAAGCCTTCTGTACATCCTCGGGCCTTACTGAGCATGT GGGAAAGCCTTCTGTACATCCTCAGGCCTTACTGAGCATGT < 41bp 0.755948662344538 0.523642150784695 0.026659757 0.008528203 prediction 0.464613023119687 Functional Loss - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89294079 chr16:89294082 synonymous SNV . 0 24 hm5C_associated_SNPs_73519 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:89294068-89294094
64251 chr10 103907024 103907024 1 + C T PAAD 103907022 + 103907002 103907042 41 GCTGGCAGGGCCGCCGAGGCCGCAACAGCCGTTCTGTCAGC GCTGGCAGGGCCGCCGAGGCCGTAACAGCCGTTCTGTCAGC < 41bp 0.826447974151839 0.594141664139834 0.66432464 0.65825766 prediction 0.46461262002401 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103907022 chr10:103907024 synonymous SNV . 0 23 hm5C_associated_SNPs_73520 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:103907020-103907040
64251 chr11 117109649 117109649 1 + G T UCEC 117109647 + 117109627 117109667 41 CATACTAAGCAGCTTGCCTCCAGGAATTGCTCTGAAGAGAA CATACTAAGCAGCTTGCCTCCATGAATTGCTCTGAAGAGAA < 41bp 0.895342253301679 0.663047852635323 0.48001948 0.231096 prediction 0.464588801332712 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117109647 chr11:117109649 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_73523 0 0 1 GRWD1 POSTAR2 ENCODE chr11:117109640-117109679
64251 chr1 206153991 206153991 1 + G C CESC 206153987 + 206153967 206154007 41 CCTACTTTGGGGCAACTTGCCAGAGATAGAAGAGAGTACAG CCTACTTTGGGGCAACTTGCCAGACATAGAAGAGAGTACAG < 41bp 0.806595468824016 0.574304941771431 0.6502061 0.3233921 prediction 0.464581054105169 Functional Loss - FAM72A;FAM72C ENSG00000196550 CDS Human protein_coding chr1:206153987 chr1:206153991 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_73524 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:206153961-206153999
64251 chr1 53068137 53068137 1 + C T COAD 53068135 + 53068115 53068155 41 CTCCTGTGGGCTGCGGCCTGCGCGCAGCAGGAGCAGGACTT CTCCTGTGGGCTGCGGCCTGCGTGCAGCAGGAGCAGGACTT < 41bp 0.745937170293554 0.513649085945343 0.09623647 0.19809738 prediction 0.464576168696422 Functional Loss - GPX7 ENSG00000116157 CDS Human protein_coding chr1:53068135 chr1:53068137 nonsynonymous SNV 0.825 0 23 hm5C_associated_SNPs_73527 0 0 2 DDX3X POSTAR2 ENCODE chr1:53068095-53068146
64251 chr7 158683965 158683965 1 + G A COAD 158683962 + 158683942 158683982 41 TCTCTCTCCATTAGCATGGCCACGAGGAAGGCTCTTCTGTG TCTCTCTCCATTAGCATGGCCACAAGGAAGGCTCTTCTGTG < 41bp 0.745535193718708 0.513253442541383 0.43849915 0.15974584 prediction 0.464563502354648 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158683962 chr7:158683965 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_73529 0 0 5 BUD13 POSTAR2 ENCODE chr7:158683954-158683971
64251 chr5 140595174 140595174 1 + C T LUSC 140595172 + 140595152 140595192 41 TCACCTACTCGCTGCTGCCGCCCCAGGACCCGCACCTGCCC TCACCTACTCGCTGCTGCCGCCTCAGGACCCGCACCTGCCC < 41bp 0.732281040045589 0.483013607320789 0.06853464 0.056470424 prediction 0.464562080091179 Functional Loss - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595172 chr5:140595174 synonymous SNV . 0 23 hm5C_associated_SNPs_73530 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140595165-140595203
64251 chr9 95599683 95599683 1 + C T SARC 95599681 + 95599661 95599701 41 ACACTGCGCAGGCTCTGGTTCTCCACTTTCAGACTGGTGAT ACACTGCGCAGGCTCTGGTTCTTCACTTTCAGACTGGTGAT < 41bp 0.801049104624697 0.568770883441132 0.8773221 0.10164502 prediction 0.464556442367129 Functional Loss - ANKRD19P ENSG00000187984;ENSG00000226721 ncRNA_exonic Human other chr9:95599681 chr9:95599683 . . 0 23 hm5C_associated_SNPs_73531 0 0 2 RBM15 POSTAR2 GSE78030,GSM2064710 chr9:95599680-95599700
64251 chr5 130506723 130506723 1 + G A UCEC 130506720 + 130506700 130506740 41 CGGTGAGGAGAGCCATGGGACGGGCAGTCAAGGTGACAGGG CGGTGAGGAGAGCCATGGGACGGACAGTCAAGGTGACAGGG < 41bp 0.760411832970188 0.528142263984385 0.3919364 0.21009529 prediction 0.464539137971606 Functional Loss - LYRM7 ENSG00000186687 CDS Human protein_coding chr5:130506720 chr5:130506723 nonsynonymous SNV 0.097 0 24 hm5C_associated_SNPs_73535 0 0 3 DDX3X POSTAR2 ENCODE chr5:130506660-130506731
64251 chr19 19790235 19790235 1 + A C rs138984536 19790234 + 19790214 19790254 41 CGCCCCGTAAACAGAAACAACATGGGAAAGCCTCCATTTCC CGCCCCGTAAACAGAAACAACCTGGGAAAGCCTCCATTTCC < 41bp 0.732266148748921 0.467381867575161 0.22877455 0.13461295 prediction 0.464532297497841 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790234 chr19:19790235 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_73538 0 0 1 UCHL5 POSTAR2 ENCODE chr19:19790118-19790242
64251 chr1 43130609 43130609 1 + C T SKCM 43130607 + 43130587 43130627 41 TTTTAAACTTAGACACTCAGCTCCAGGCCTGCTTTCCATGG TTTTAAACTTAGACACTCAGCTTCAGGCCTGCTTTCCATGG < 41bp 0.851482031147495 0.619219387451002 0.7113912 0.047667503 prediction 0.464525287392985 Functional Loss - PPIH ENSG00000171960 CDS Human protein_coding chr1:43130607 chr1:43130609 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_73539 0 0 1 DDX55 POSTAR2 ENCODE chr1:43130575-43130626
64251 chr20 57598602 57598602 1 + G T GBM 57598600 + 57598580 57598620 41 CTAGAACCTGGGACGATGGACAGCATTCGATCTAGCAAATT CTAGAACCTGGGACGATGGACATCATTCGATCTAGCAAATT < 41bp 0.732261818193266 0.38565364868768 0.23537257 0.12536493 prediction 0.464523636386532 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598600 chr20:57598602 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_73540 0 0 1 PPIG POSTAR2 ENCODE chr20:57598543-57598608
64251 chr14 64989393 64989393 1 + C T GBM 64989391 + 64989371 64989411 41 TGGTAGGAAAACTCTAAAACCTCGAATGTCAGTAAGTGCTG TGGTAGGAAAACTCTAAAACCTTGAATGTCAGTAAGTGCTG < 41bp 0.848765201580617 0.616514349541437 0.89428306 0.08913532 prediction 0.464501704078359 Functional Loss - ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64989391 chr14:64989393 stopgain 0.985 1 23 hm5C_associated_SNPs_73542 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:64989377-64989406
64251 chr20 44439823 44439823 1 + C T SARC 44439821 + 44439801 44439841 41 GCATCGTGCTGTTGAAGCACCTCCACAGACCTGAGGCCGGG GCATCGTGCTGTTGAAGCACCTTCACAGACCTGAGGCCGGG < 41bp 0.835726136339072 0.603499956470288 0.9609147 0.37031764 prediction 0.464452359737569 Functional Loss - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44439821 chr20:44439823 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_73551 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:44439774-44439824
64251 chr4 20618601 20618601 1 + G T LUAD 20618598 + 20618578 20618618 41 GGCAGAACGGAACCAGCTTCCACGGCTGCATCCGGAACCTT GGCAGAACGGAACCAGCTTCCACTGCTGCATCCGGAACCTT < 41bp 0.732222870363212 0.358922075506529 0.48793042 0.2695248 prediction 0.464445740726424 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20618598 chr4:20618601 nonsynonymous SNV 0.990 5 24 hm5C_associated_SNPs_73554 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:20618600-20618620
64251 chr4 20618600 20618600 1 + C T UCEC 20618598 + 20618578 20618618 41 GGCAGAACGGAACCAGCTTCCACGGCTGCATCCGGAACCTT GGCAGAACGGAACCAGCTTCCATGGCTGCATCCGGAACCTT < 41bp 0.732222870363212 0.463223451600062 0.48793042 0.37979242 prediction 0.464445740726424 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20618598 chr4:20618600 synonymous SNV . 0 23 hm5C_associated_SNPs_73555 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:20618600-20618620
64251 chr7 128490875 128490875 1 + C T UCEC 128490873 + 128490853 128490893 41 GCAGGAGAGGTGCGGATGCCCTCGGGGAAGACGGCACGGCC GCAGGAGAGGTGCGGATGCCCTTGGGGAAGACGGCACGGCC < 41bp 0.788563245542199 0.556340616382033 0.15870714 0.1458044 prediction 0.464445258320331 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128490873 chr7:128490875 nonsynonymous SNV 0.931 5 23 hm5C_associated_SNPs_73556 0 0 4 FMR1 POSTAR2 ENCODE chr7:128490862-128490892
64251 chr14 58666950 58666950 1 + G T UCEC 58666947 + 58666927 58666967 41 CTTACTACCATGCCGCTCTACGAGGGCCTGGGGAGCGGCGG CTTACTACCATGCCGCTCTACGATGGCCTGGGGAGCGGCGG < 41bp 0.919747061107058 0.687527450471844 0.4202221 0.29561782 prediction 0.464439221270429 Functional Loss - ACTR10 ENSG00000131966 CDS Human protein_coding chr14:58666947 chr14:58666950 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_73557 0 0 4 DDX3X POSTAR2 ENCODE chr14:58666906-58667014
64251 chr5 43659345 43659345 1 + G T LUAD 43659343 + 43659323 43659363 41 CACTGTGCTGAACAGCTACTCAGGCTGGGCCCTGTGTGCAG CACTGTGCTGAACAGCTACTCATGCTGGGCCCTGTGTGCAG < 41bp 0.732213906222517 0.38216743317109 0.8380393 0.32100916 prediction 0.464427812445035 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43659343 chr5:43659345 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_73559 0 0 3 FMR1 POSTAR2 ENCODE chr5:43659283-43659380
64251 chr8 97285557 97285557 1 + G T BRCA 97285554 + 97285534 97285574 41 TCTGTTCCAGAAGACAACATCTGGAGAGGCATCCTCTCTGT TCTGTTCCAGAAGACAACATCTGTAGAGGCATCCTCTCTGT < 41bp 0.922593206236844 0.690384939886003 0.8456697 0.38610494 prediction 0.464416532701682 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97285554 chr8:97285557 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_73563 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:97285540-97285560
64251 chr7 150068690 150068690 1 + C T LUSC 150068688 + 150068668 150068708 41 ACCTGGGCTTTGCCTGCCACCTCTGTGGGCAGAGCTTCCGA ACCTGGGCTTTGCCTGCCACCTTTGTGGGCAGAGCTTCCGA < 41bp 0.732204462932057 0.483686620632199 0.19596177 0.14974862 prediction 0.464408925864114 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068688 chr7:150068690 synonymous SNV . 0 23 hm5C_associated_SNPs_73564 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150068580-150068740
64251 chr19 580461 580461 1 + G A LUSC 580458 + 580438 580478 41 GCACGGCCAACATCCAGCTCCACGGTGAGTCCTGCAGCCAG GCACGGCCAACATCCAGCTCCACAGTGAGTCCTGCAGCCAG < 41bp 0.754623382199839 0.522427126420357 0.2737549 0.20826706 prediction 0.464392511558964 Functional Loss - BSG ENSG00000172270 CDS Human protein_coding chr19:580458 chr19:580461 nonsynonymous SNV 0.007 3 24 hm5C_associated_SNPs_73569 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:580430-580461
64251 chr7 73634311 73634311 1 + G T UCEC 73634308 + 73634288 73634328 41 AGTGGTCGGGCAGGCATGGCCAGGACCCCTGGCGGACATGG AGTGGTCGGGCAGGCATGGCCAGTACCCCTGGCGGACATGG < 41bp 0.93172852551083 0.699534452522844 0.9000355 0.2174578 prediction 0.464388145975974 Functional Loss - LAT2 ENSG00000086730 CDS Human protein_coding chr7:73634308 chr7:73634311 nonsynonymous SNV 0.033 3 24 hm5C_associated_SNPs_73571 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:73634287-73634313
64251 chr11 4150363 4150363 1 + C T STAD 4150361 + 4150341 4150381 41 ACCTATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAAG ACCTATGGGACTGGAAGGTTCTTAAGGAGAAGATTGCAAAG < 41bp 0.732193481072085 0.4378379053988 0.226071 0.226971 prediction 0.46438696214417 Functional Loss - RRM1 ENSG00000167325 CDS Human protein_coding chr11:4150361 chr11:4150363 synonymous SNV . 0 23 hm5C_associated_SNPs_73572 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4150327-4150363
64251 chr16 89293777 89293777 1 + G T LUAD 89293775 + 89293755 89293795 41 TAAACACGTCCAAACAGACCCTGGACAGAAGCCCTATGAAT TAAACACGTCCAAACAGACCCTTGACAGAAGCCCTATGAAT < 41bp 0.732192889618681 0.405743453273937 0.11591926 0.064647615 prediction 0.464385779237362 Functional Loss - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293775 chr16:89293777 stopgain 0.010 0 23 hm5C_associated_SNPs_73573 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89293767-89293793
64251 chr12 121003283 121003283 1 + C T COAD 121003281 + 121003261 121003301 41 AAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATT AAAAGAAGGCTCGGGAGGAACGTCGCCGAGAGCGCAGGATT < 41bp 0.732192506660337 0.443294763966255 0.24988729 0.22443801 prediction 0.464385013320673 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121003281 chr12:121003283 synonymous SNV . 0 23 hm5C_associated_SNPs_73574 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:121003263-121003302
64251 chr12 105380143 105380143 1 + G A rs12580271 105380140 + 105380120 105380160 41 TTGAGGGAAGCATGGAGGTCCATGGCAAGCCCAAGGCTAGC TTGAGGGAAGCATGGAGGTCCATAGCAAGCCCAAGGCTAGC < 41bp 0.740472745073781 0.508281475157612 0.26614726 0.20834899 prediction 0.464382539832339 Functional Loss - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380140 chr12:105380143 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_73575 0 0 3 DDX3X POSTAR2 ENCODE chr12:105380103-105380246
64251 chr19 32975540 32975540 1 + G A rs73569254 32975537 + 32975517 32975557 41 GCCCCGGAGTCTCCATCTCTCTCGTAAGCCACCTGCCACAG GCCCCGGAGTCTCCATCTCTCTCATAAGCCACCTGCCACAG < 41bp 0.732187486842308 0.49221839068204 0.07744396 0.0398705 prediction 0.464374973684615 Functional Loss - DPY19L3 ENSG00000178904 UTR3 Human protein_coding chr19:32975537 chr19:32975540 . . 0 24 hm5C_associated_SNPs_73577 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr19:32975540-32975572
64251 chr3 9486878 9486878 1 + G A COAD 9486875 + 9486855 9486895 41 AGAGACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGA AGAGACTAGACGTAGAAAAGCACAACGGAAAGAGCTAGAGA < 41bp 0.740013963152405 0.507827716003759 0.14947647 0.117866725 prediction 0.464372494297292 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9486875 chr3:9486878 nonsynonymous SNV 0.989 5 24 hm5C_associated_SNPs_73578 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:9486833-9486904
64251 chr12 50480065 50480065 1 + G T LUAD 50480063 + 50480043 50480083 41 CAGTCAGGGATGGATCAGTCCCGCAAGAGACCTGCCCCTCA CAGTCAGGGATGGATCAGTCCCTCAAGAGACCTGCCCCTCA < 41bp 0.732182014961298 0.382552165217357 0.19919708 0.10447642 prediction 0.464364029922596 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50480063 chr12:50480065 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_73580 0 0 1 FMR1 POSTAR2 ENCODE chr12:50479988-50480110
64251 chr3 14170970 14170970 1 + G T SARC 14170967 + 14170947 14170987 41 AGTTAAAACCAGCTCCCAGCCAGGCTTCCTGGAACGGCTGA AGTTAAAACCAGCTCCCAGCCAGTCTTCCTGGAACGGCTGA < 41bp 0.732181572395214 0.324834881505823 0.5793201 0.10195136 prediction 0.464363144790428 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14170967 chr3:14170970 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_73581 0 0 3 NOL12 POSTAR2 ENCODE chr3:14170943-14171008
64251 chr9 132397705 132397705 1 + G A PAAD 132397702 + 132397682 132397722 41 AGGAGAGGCAGGAGAACCTCCCCGATGAGATCTACCATGTC AGGAGAGGCAGGAGAACCTCCCCAATGAGATCTACCATGTC < 41bp 0.733018329275655 0.500838272330789 0.29348338 0.1972712 prediction 0.464360113889733 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397702 chr9:132397705 nonsynonymous SNV 0.575 1 24 hm5C_associated_SNPs_73582 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:132397704-132397705
64251 chr10 102753234 102753234 1 + C T GBM 102753232 + 102753212 102753252 41 GCTCAGGCCAGGCCCCCACTCCCGACCAGCCAGACACCTCC GCTCAGGCCAGGCCCCCACTCCTGACCAGCCAGACACCTCC < 41bp 0.800388566457638 0.568213079248286 0.1741738 0.07988608 prediction 0.464350974418705 Functional Loss - TWNK ENSG00000107815 CDS Human protein_coding chr10:102753232 chr10:102753234 synonymous SNV . 0 23 hm5C_associated_SNPs_73586 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:102753192-102753234
64251 chr11 6630568 6630568 1 + G A HNSC 6630565 + 6630545 6630585 41 TGGCAGGGCAATGACATTGTCGTGAAGGTGCTGAAGGTTCG TGGCAGGGCAATGACATTGTCGTAAAGGTGCTGAAGGTTCG < 41bp 0.732161202136776 0.498789934553989 0.22430375 0.1237824 prediction 0.464322404273552 Functional Loss - ILK ENSG00000166333 CDS Human protein_coding chr11:6630565 chr11:6630568 synonymous SNV . 0 24 hm5C_associated_SNPs_73591 0 0 3 DDX24 POSTAR2 ENCODE chr11:6630540-6630600
64251 chr7 141478568 141478568 1 + A T STAD 141478564 + 141478544 141478584 41 TTGTGTTTCATGTTTTTGGACTCGAGCAGTGTCTGGTTTGT TTGTGTTTCATGTTTTTGGACTCGTGCAGTGTCTGGTTTGT < 41bp 0.732156254393147 0.42063287444497 0.2036041 0.18012473 prediction 0.464312508786294 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478564 chr7:141478568 nonsynonymous SNV 0.095 0 25 hm5C_associated_SNPs_73596 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:141478510-141478575
64251 chr7 141478566 141478566 1 + C T UCEC 141478564 + 141478544 141478584 41 TTGTGTTTCATGTTTTTGGACTCGAGCAGTGTCTGGTTTGT TTGTGTTTCATGTTTTTGGACTTGAGCAGTGTCTGGTTTGT < 41bp 0.732156254393147 0.46982551969655 0.2036041 0.1867171 prediction 0.464312508786294 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478564 chr7:141478566 nonsynonymous SNV 0.202 0 23 hm5C_associated_SNPs_73597 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:141478510-141478575
64251 chr1 246784911 246784911 1 + G A SKCM 246784908 + 246784888 246784928 41 TGAAGTTGAGCAGTTGGATTCAAGAGCACTTCCCCTTTGCC TGAAGTTGAGCAGTTGGATTCAAAAGCACTTCCCCTTTGCC < 41bp 0.775605382174534 0.543449988817753 0.8753214 0.24082017 prediction 0.464310786713562 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246784908 chr1:246784911 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_73600 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:246784890-246784926
64251 chr14 60581897 60581897 1 + T C BLCA 60581896 + 60581876 60581916 41 TCATGGAAGGAATGCCTTTTCTACATCATTATATTAGTCTT TCATGGAAGGAATGCCTTTTCCACATCATTATATTAGTCTT < 41bp 0.79443527584039 0.562286718998917 0.8380364 0.07497999 prediction 0.464297113682947 Functional Loss - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60581896 chr14:60581897 nonsynonymous SNV 0.943 0 22 hm5C_associated_SNPs_73604 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:60581880-60581900
64251 chr19 50905762 50905762 1 + T C rs1143666 50905761 + 50905741 50905781 41 CAACTGGCTGGAGCTCCCAGCTGGGAAATACGCCCTGAGGC CAACTGGCTGGAGCTCCCAGCCGGGAAATACGCCCTGAGGC < 41bp 0.759051786880916 0.526910961033576 0.41736573 0.7891063 prediction 0.464281651694681 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905761 chr19:50905762 synonymous SNV . 0 22 hm5C_associated_SNPs_73609 1 0 7 FMR1 POSTAR2 ENCODE chr19:50905712-50905765
64251 chr7 100730995 100730995 1 + G A ESCA 100730992 + 100730972 100731012 41 TTGTGCCAGGCCTGTGCCGACGGGCACCGCTGCACCCGCCA TTGTGCCAGGCCTGTGCCGACGGACACCGCTGCACCCGCCA < 41bp 0.775773469340185 0.543636473781097 0.6412976 0.3503567 prediction 0.464273991118177 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730992 chr7:100730995 synonymous SNV . 0 24 hm5C_associated_SNPs_73614 0 0 2 FXR2 POSTAR2 ENCODE chr7:100730973-100731013
64251 chr2 239076096 239076096 1 + C T rs143517409 239076094 + 239076074 239076114 41 TTCTCATGGAGTGCAAAGTGCACCAGCCAGGGCCCCTACCT TTCTCATGGAGTGCAAAGTGCATCAGCCAGGGCCCCTACCT < 41bp 0.746742312900929 0.514608359703297 0.17862767 0.16566524 prediction 0.464267906395263 Functional Loss - ERFE ENSG00000178752 UTR3 Human protein_coding chr2:239076094 chr2:239076096 . . 0 23 hm5C_associated_SNPs_73615 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:239076071-239076101
64251 chr5 80419585 80419585 1 + A C rs143742782 80419581 + 80419561 80419601 41 GCACCTCCGCTATCGACAGCCTGGAGGTAAGAGCTCAAGAG GCACCTCCGCTATCGACAGCCTGGCGGTAAGAGCTCAAGAG < 41bp 0.732130459418108 0.328128426067919 0.39435554 0.1909652 prediction 0.464260918836217 Functional Loss - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80419581 chr5:80419585 synonymous SNV . 0 25 hm5C_associated_SNPs_73616 0 0 2 PRPF8 POSTAR2 ENCODE chr5:80419547-80419607
64251 chr5 80419582 80419582 1 + T C LIHC 80419581 + 80419561 80419601 41 GCACCTCCGCTATCGACAGCCTGGAGGTAAGAGCTCAAGAG GCACCTCCGCTATCGACAGCCCGGAGGTAAGAGCTCAAGAG < 41bp 0.732130459418108 0.489801828530363 0.39435554 0.3929238 prediction 0.464260918836217 Functional Loss - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80419581 chr5:80419582 synonymous SNV . 0 22 hm5C_associated_SNPs_73617 0 0 2 PRPF8 POSTAR2 ENCODE chr5:80419547-80419607
64251 chr2 27247085 27247085 1 + G A UCEC 27247082 + 27247062 27247102 41 GGATTACAACCCTCTGCTGGCGCGGCAGGGCCAGGACGTAG GGATTACAACCCTCTGCTGGCGCAGCAGGGCCAGGACGTAG < 41bp 0.765041785370305 0.532911999803792 0.36176604 0.29074836 prediction 0.464259571133026 Functional Loss - MAPRE3 ENSG00000084764 CDS Human protein_coding chr2:27247082 chr2:27247085 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_73618 0 0 1 SRSF1 POSTAR2 ENCODE chr2:27247042-27247126
64251 chr11 70049785 70049785 1 + G T LIHC 70049782 + 70049762 70049802 41 TGCTCGCCTCCCTGCGGCGCCACGACCTGCTGCGGCGCGTC TGCTCGCCTCCCTGCGGCGCCACTACCTGCTGCGGCGCGTC < 41bp 0.918771379654556 0.686643491158288 0.07962376 0.025654137 prediction 0.464255776992536 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70049782 chr11:70049785 nonsynonymous SNV 0.991 5 24 hm5C_associated_SNPs_73619 0 0 1 DHX30 POSTAR2 ENCODE chr11:70049760-70049812
64251 chr11 6415569 6415569 1 + A T KIRC 6415565 + 6415545 6415585 41 GGCAGCTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCC GGCAGCTTCTCTACAGGGCTCGAGTAACCTATGGGCTGCCC < 41bp 0.874325784777565 0.642201758934507 0.5174046 0.1677748 prediction 0.464248051686114 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415565 chr11:6415569 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_73620 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:6415532-6415600
64251 chr14 89030019 89030019 1 + G T UCEC 89030016 + 89029996 89030036 41 GTGCCATTAAGGGGAAATTACAAGAATTAGGAGCTTATGTT GTGCCATTAAGGGGAAATTACAATAATTAGGAGCTTATGTT < 41bp 0.732121958725697 0.364688329044071 0.4883417 0.08431718 prediction 0.464243917451394 Functional Loss - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89030016 chr14:89030019 stopgain 0.998 1 24 hm5C_associated_SNPs_73622 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:89029998-89030025
64251 chr11 35685045 35685045 1 + G T UCEC 35685043 + 35685023 35685063 41 GATGAGGAGAGTGAAGAAGACAGCGAGGAAGAAATGGAGGA GATGAGGAGAGTGAAGAAGACATCGAGGAAGAAATGGAGGA < 41bp 0.732119432594298 0.388958397745509 0.17011091 0.09556365 prediction 0.464238865188595 Functional Loss - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35685043 chr11:35685045 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_73624 0 0 33 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:35684985-35685065
64251 chr10 70930992 70930992 1 + A T UCEC 70930988 + 70930968 70931008 41 TCACCAGCGATTTGAATCTCCAGAATCACAGGCATCTGCCG TCACCAGCGATTTGAATCTCCAGATTCACAGGCATCTGCCG < 41bp 0.732113495495753 0.433836974218539 0.43564457 0.83232796 prediction 0.464226990991507 Functional Loss - VPS26A ENSG00000122958 CDS Human protein_coding chr10:70930988 chr10:70930992 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_73630 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:70930940-70931000
64251 chr19 19790374 19790374 1 + T C rs138381823 19790373 + 19790353 19790393 41 AATCCATCAAAGAACTCACACTGGAAAGAGGTCCTATAAAT AATCCATCAAAGAACTCACACCGGAAAGAGGTCCTATAAAT < 41bp 0.732109209139298 0.489232503296014 0.054516464 0.07998517 prediction 0.464218418278596 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790373 chr19:19790374 synonymous SNV . 0 22 hm5C_associated_SNPs_73631 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:19790353-19790376
64251 chr11 44101043 44101043 1 + A C rs143463105 44101039 + 44101019 44101059 41 CCCTGTGGGACGCATCTGCCCTACACACTAAGTCTCTCCTC CCCTGTGGGACGCATCTGCCCTACCCACTAAGTCTCTCCTC < 41bp 0.732107165702019 0.392153855679183 0.11530611 0.08434898 prediction 0.464214331404037 Functional Loss - ACCS ENSG00000110455 intronic Human protein_coding chr11:44101039 chr11:44101043 . . 0 25 hm5C_associated_SNPs_73633 0 0 2 SF3B4 POSTAR2 ENCODE chr11:44101010-44101089
64251 chr16 1825336 1825336 1 + G A STAD 1825333 + 1825313 1825353 41 CAGGTCTCGCCAGCACGTTTCCCGGGGGACACAGCAGCCAG CAGGTCTCGCCAGCACGTTTCCCAGGGGACACAGCAGCCAG < 41bp 0.732094466586022 0.482163057009931 0.91034853 0.19782314 prediction 0.464188933172043 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825333 chr16:1825336 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73639 0 0 14 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr21 47706973 47706973 1 + A C THCA 47706969 + 47706949 47706989 41 GTGTTGACAACAAGAATATTCAGCACATTAATAGAATCTAC GTGTTGACAACAAGAATATTCAGCCCATTAATAGAATCTAC < 41bp 0.732091861424432 0.321410575681146 0.18204123 0.10074782 prediction 0.464183722848864 Functional Loss - YBEY ENSG00000182362 CDS Human protein_coding chr21:47706969 chr21:47706973 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_73640 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr21:47706960-47706980
64251 chr19 50548134 50548134 1 + C T GBM 50548132 + 50548112 50548152 41 GCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGA GCCACCAACGGGGAAAGTCCCATGGAATGCAAGAGTCATGA < 41bp 0.789943948819459 0.557854053038384 0.33478084 0.23712781 prediction 0.46417979156215 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548132 chr19:50548134 nonsynonymous SNV 0.013 1 23 hm5C_associated_SNPs_73642 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50548106-50548135
64251 chr11 67050628 67050628 1 + T C KIRC 67050627 + 67050607 67050647 41 GCTGCCCGACTCCTTCTCCCCTGAACTACGCTCCCTGCTGG GCTGCCCGACTCCTTCTCCCCCGAACTACGCTCCCTGCTGG < 41bp 0.794693581278831 0.562611068103765 0.22157353 0.17567173 prediction 0.464165026350133 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67050627 chr11:67050628 synonymous SNV . 0 22 hm5C_associated_SNPs_73647 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:67050599-67050629
64251 chr9 37304308 37304308 1 + C T PRAD 37304306 + 37304286 37304326 41 ATCAAAAAACTGCCCCTTACCACGAGTACGTGAAATATGCT ATCAAAAAACTGCCCCTTACCATGAGTACGTGAAATATGCT < 41bp 0.732075859872007 0.44312022745997 0.352455 0.27821583 prediction 0.464151719744015 Functional Loss - ZCCHC7 ENSG00000147905 CDS Human protein_coding chr9:37304306 chr9:37304308 stopgain 0.737 0 23 hm5C_associated_SNPs_73654 0 0 1 YBX3 POSTAR2 ENCODE chr9:37304276-37304310
64251 chr19 50390808 50390808 1 + C T HNSC 50390806 + 50390786 50390826 41 TTCAAGAGGGAATTCCCCTTCCCGGATGTCCTTCGGCTGTG TTCAAGAGGGAATTCCCCTTCCTGGATGTCCTTCGGCTGTG < 41bp 0.732069033659065 0.466513285142183 0.31727654 0.2931877 prediction 0.464138067318129 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50390806 chr19:50390808 nonsynonymous SNV 0.988 0 23 hm5C_associated_SNPs_73659 0 0 2 PPIG POSTAR2 ENCODE chr19:50390790-50390817
64251 chr3 9787362 9787362 1 + C T SKCM 9787359 + 9787339 9787379 41 GGCACTGAGAATGAGGCCTACTCCGTGGGCACTGGCCGCGG GGCACTGAGAATGAGGCCTACTCTGTGGGCACTGGCCGCGG < 41bp 0.734255706582262 0.502188720158941 0.29262453 0.1830166 prediction 0.464133972846642 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9787359 chr3:9787362 synonymous SNV . 0 24 hm5C_associated_SNPs_73660 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:9787346-9787366
64251 chr19 10940926 10940926 1 + G A UCEC 10940923 + 10940903 10940943 41 GTGGGGGCAGCAGCCTCCTTCTCGGCGCCCCCAATCCCATC GTGGGGGCAGCAGCCTCCTTCTCAGCGCCCCCAATCCCATC < 41bp 0.732058282823975 0.492337514920317 0.45154324 0.27723905 prediction 0.46411656564795 Functional Loss - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10940923 chr19:10940926 synonymous SNV . 0 24 hm5C_associated_SNPs_73664 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:10940915-10940958
64251 chr2 70314758 70314758 1 + G C rs528717582 70314754 + 70314734 70314774 41 CCGCCCGCTCCCGCTCGCTCCCGCGGCCCTCGCTCGCCTCG CCGCCCGCTCCCGCTCGCTCCCGCCGCCCTCGCTCGCCTCG < 41bp 0.776888621039298 0.544834080196467 0.93954563 0.91869247 prediction 0.464109081685663 Functional Loss - PCBP1 ENSG00000179818 ncRNA_intronic Human processed_transcript chr2:70314754 chr2:70314758 . . 0 25 hm5C_associated_SNPs_73666 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:70314746-70314772
64251 chr7 42972004 42972004 1 + G T UCEC 42972001 + 42971981 42972021 41 GGAAAATGGCGCTGGCCATGCTGGTCTTGGTGGTTTCGCCG GGAAAATGGCGCTGGCCATGCTGTTCTTGGTGGTTTCGCCG < 41bp 0.916714753003376 0.684661137609169 0.30736464 0.2444408 prediction 0.464107230788414 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42972001 chr7:42972004 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73667 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:42972000-42972020
64251 chr10 21959512 21959512 1 + T C LUAD 21959511 + 21959491 21959531 41 TGGAAAAGATGTTTCAGAGACTAGAGGGTCAGAGGGCAAAG TGGAAAAGATGTTTCAGAGACCAGAGGGTCAGAGGGCAAAG < 41bp 0.755131695935962 0.52308691779374 0.090661764 0.21952742 prediction 0.464089556284445 Functional Loss - MLLT10 ENSG00000078403 CDS Human protein_coding chr10:21959511 chr10:21959512 synonymous SNV . 0 22 hm5C_associated_SNPs_73672 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:21959501-21959532
64251 chr11 46726950 46726950 1 + G C LUSC 46726946 + 46726926 46726966 41 CCCTCCGAGACCCACACACGCTCCGAGCTCACGAGCGCCTG CCCTCCGAGACCCACACACGCTCCCAGCTCACGAGCGCCTG < 41bp 0.732044573421506 0.44625052994741 0.07294047 0.06053421 prediction 0.464089146843011 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726946 chr11:46726950 nonsynonymous SNV 0.978 4 25 hm5C_associated_SNPs_73673 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:46726945-46726972
64251 chr17 34942353 34942353 1 + G T LUAD 34942351 + 34942331 34942371 41 AACAGGTTCTCGGGAGGGTTCGGATGTTGCCTGCACTGAAG AACAGGTTCTCGGGAGGGTTCGTATGTTGCCTGCACTGAAG < 41bp 0.732044529224882 0.38492747876612 0.8852719 0.092707545 prediction 0.464089058449764 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34942351 chr17:34942353 nonsynonymous SNV 0.968 3 23 hm5C_associated_SNPs_73674 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:34942336-34942358
64251 chr12 113711406 113711406 1 + G A COAD 113711403 + 113711383 113711423 41 TGTGATGATGCCCTCCTACTCCCGGAACCCCTGGTCCTGCG TGTGATGATGCCCTCCTACTCCCAGAACCCCTGGTCCTGCG < 41bp 0.73204024033367 0.485477719087983 0.062167853 0.03325361 prediction 0.46408048066734 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113711403 chr12:113711406 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73675 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:113711392-113711435
64251 chr3 111732356 111732356 1 + G T COAD 111732353 + 111732333 111732373 41 GGCAGCAACAAGGGAGCCTCCCAGGCGGGCATGACAGGGTA GGCAGCAACAAGGGAGCCTCCCATGCGGGCATGACAGGGTA < 41bp 0.732039111169655 0.340363022549834 0.27051395 0.083571315 prediction 0.46407822233931 Functional Loss - TAGLN3 ENSG00000144834 CDS Human protein_coding chr3:111732353 chr3:111732356 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_73676 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039843 chr3:111732340-111732360
64251 chr22 45683324 45683324 1 + G A UCEC 45683321 + 45683301 45683341 41 AACGCACCCCTGTCGGCAGCCACGGAGTACAGGTGGGTGTA AACGCACCCCTGTCGGCAGCCACAGAGTACAGGTGGGTGTA < 41bp 0.732033297765387 0.488658138976314 0.41746104 0.32345235 prediction 0.464066595530773 Functional Loss - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45683321 chr22:45683324 synonymous SNV . 0 24 hm5C_associated_SNPs_73682 0 0 1 PRPF8 POSTAR2 ENCODE chr22:45683304-45683374
64251 chr12 7310611 7310611 1 + G A PAAD 7310608 + 7310588 7310628 41 GAGGATGAGGACAGCAGTGACTCGGAGGTGGCCGATTCCCC GAGGATGAGGACAGCAGTGACTCAGAGGTGGCCGATTCCCC < 41bp 0.740516034653038 0.508483578907871 0.19187266 0.16274372 prediction 0.464064911490332 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7310608 chr12:7310611 synonymous SNV . 0 24 hm5C_associated_SNPs_73683 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr12:7310600-7310620
64251 chr16 89167717 89167717 1 + A C rs538548478 89167716 + 89167696 89167736 41 AGTGGGACCACGGGGAGGCCCAAGGGCGTGCTGAGCACGCA AGTGGGACCACGGGGAGGCCCCAGGGCGTGCTGAGCACGCA < 41bp 0.786105035871583 0.554077240618479 0.89547545 0.8483076 prediction 0.464055590506209 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89167716 chr16:89167717 nonsynonymous SNV 0.132 5 22 hm5C_associated_SNPs_73685 0 0 7 AGGF1 POSTAR2 ENCODE chr16:89167683-89167735
64251 chr22 50313456 50313456 1 + G T UCEC 50313454 + 50313434 50313474 41 GCAATCAGATGCTAGAGGCGCAGGAGGAGCACCTGGAGGCC GCAATCAGATGCTAGAGGCGCATGAGGAGCACCTGGAGGCC < 41bp 0.904120846712447 0.67209506003436 0.87547815 0.8170525 prediction 0.464051573356174 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50313454 chr22:50313456 nonsynonymous SNV 0.368 0 23 hm5C_associated_SNPs_73686 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50313426-50313462
64251 chr19 16631654 16631654 1 + G A UCEC 16631651 + 16631631 16631671 41 TTTTACCTGTTCCTCTTCTCCTGGCCTTTCCTCCGCCGGGC TTTTACCTGTTCCTCTTCTCCTGACCTTTCCTCCGCCGGGC < 41bp 0.75685954591313 0.524836297384855 0.8246571 0.41775984 prediction 0.464046497056551 Functional Loss - CHERP ENSG00000085872 CDS Human protein_coding chr19:16631651 chr19:16631654 synonymous SNV . 0 24 hm5C_associated_SNPs_73688 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:16631573-16631673
64251 chr22 28397720 28397720 1 + G T rs470102 28397717 + 28397697 28397737 41 CCCTGCAGGAGCGGCACCAACTGGCATGCTCGCTTGTGGAC CCCTGCAGGAGCGGCACCAACTGTCATGCTCGCTTGTGGAC < 41bp 0.732020038685596 0.365367273535425 0.44411504 0.22940588 prediction 0.464040077371192 Functional Loss - TTC28-AS1 ENSG00000235954 ncRNA_exonic Human processed_transcript chr22:28397717 chr22:28397720 . . 0 24 hm5C_associated_SNPs_73690 0 0 1 BUD13 POSTAR2 ENCODE chr22:28397659-28397729
64251 chr14 70490067 70490067 1 + G T COAD 70490064 + 70490044 70490084 41 GTGAAGAAGAAAGCCAAGCCCAAGAAATGTGCCCGGCGTTT GTGAAGAAGAAAGCCAAGCCCAATAAATGTGCCCGGCGTTT < 41bp 0.732009384569281 0.335783218933663 0.30099732 0.15849447 prediction 0.464018769138562 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70490064 chr14:70490067 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73695 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:70490065-70490103
64251 chr17 35825566 35825566 1 + G T UCEC 35825564 + 35825544 35825584 41 GGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATG GGCGGTATCCCAAGGAGGTCCATGACCTGTATGAAACAATG < 41bp 0.732000493662441 0.388355659175224 0.36440855 0.20670536 prediction 0.464000987324881 Functional Loss - TADA2A ENSG00000108264 CDS Human other chr17:35825564 chr17:35825566 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_73696 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:35825540-35825572
64251 chr5 154393911 154393911 1 + G T BLCA 154393909 + 154393889 154393929 41 AGAAAGCTCAAATAAATATACGGGAGGATCCTAAGGAAGGC AGAAAGCTCAAATAAATATACGTGAGGATCCTAAGGAAGGC < 41bp 0.888463841243734 0.656463740428779 0.33042866 0.17657065 prediction 0.464000201629909 Functional Loss - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154393909 chr5:154393911 synonymous SNV . 0 23 hm5C_associated_SNPs_73697 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154393900-154393920
64251 chr1 236925826 236925826 1 + G T LUSC 236925823 + 236925803 236925843 41 GATCAGGCCCAGTACTGCATCAAGAGGATGCCCGCCTACTC GATCAGGCCCAGTACTGCATCAATAGGATGCCCGCCTACTC < 41bp 0.920871429392102 0.688871779122203 0.893326 0.3778793 prediction 0.463999300539797 Functional Loss - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236925823 chr1:236925826 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_73698 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:236925803-236925826
64251 chr14 89038503 89038503 1 + C T rs199755342 89038501 + 89038481 89038521 41 CCACCACTTGCCATTCCTAGCGCGAGACCTGAAAAAAGAGA CCACCACTTGCCATTCCTAGCGTGAGACCTGAAAAAAGAGA < 41bp 0.824703400924681 0.592704747132056 0.3139053 0.36578417 prediction 0.463997307585251 Functional Loss - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89038501 chr14:89038503 nonsynonymous SNV 0.042 1 23 hm5C_associated_SNPs_73699 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:89038476-89038509
64251 chr2 11758561 11758561 1 + C T rs376336903 11758559 + 11758539 11758579 41 CGGGCAAGTCAGGGGCCACCCTCGGCCATCAGCAGGCACAG CGGGCAAGTCAGGGGCCACCCTTGGCCATCAGCAGGCACAG < 41bp 0.731994112232977 0.480734408476699 0.73848444 0.45618814 prediction 0.463988224465955 Functional Loss - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11758559 chr2:11758561 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_73702 0 0 1 EIF3H POSTAR2 ENCODE chr2:11758536-11758575
64251 chr19 14578764 14578764 1 + G A UCEC 14578761 + 14578741 14578781 41 GAAGAAAGGGGACATTGTGGCCCGAGACGAGGTGGAGAGGT GAAGAAAGGGGACATTGTGGCCCAAGACGAGGTGGAGAGGT < 41bp 0.743292132111426 0.511301776034822 0.20680934 0.08127296 prediction 0.463980712153207 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14578761 chr19:14578764 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_73704 0 0 5 DDX55 POSTAR2 ENCODE chr19:14578761-14578779
64251 chr19 9272065 9272065 1 + G A UCEC 9272062 + 9272042 9272082 41 GGAGCCACGTGAAAACTCACCGGGGAGAGAAGCTCTTTGTG GGAGCCACGTGAAAACTCACCGGAGAGAGAAGCTCTTTGTG < 41bp 0.775646796843036 0.543660555703025 0.8731555 0.6796777 prediction 0.463972482280023 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9272062 chr19:9272065 nonsynonymous SNV 0.537 2 24 hm5C_associated_SNPs_73705 0 0 1 SRSF9 POSTAR2 ENCODE chr19:9271993-9272073
64251 chr10 105037756 105037756 1 + C T UCEC 105037754 + 105037734 105037774 41 GTGGCTAAACCAGACCTGACCTCGGCTCTGAGGGAGATCCG GTGGCTAAACCAGACCTGACCTTGGCTCTGAGGGAGATCCG < 41bp 0.814519780433899 0.582533679879415 0.4209864 0.17798284 prediction 0.463972201108969 Functional Loss - INA ENSG00000148798 CDS Human protein_coding chr10:105037754 chr10:105037756 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_73706 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:105037746-105037769
64251 chr12 57865760 57865760 1 + G C STAD 57865756 + 57865736 57865776 41 TGGACATACCCCACCTCCCTCTGGGCCCCCCAACATGGCTG TGGACATACCCCACCTCCCTCTGGCCCCCCCAACATGGCTG < 41bp 0.7319765817551 0.43483768557008 0.3960726 0.059590876 prediction 0.4639531635102 Functional Loss - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57865756 chr12:57865760 synonymous SNV . 0 25 hm5C_associated_SNPs_73709 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:57865760-57865781
64251 chr1 166818983 166818983 1 + G T UCEC 166818980 + 166818960 166819000 41 GGCGAAAAGCCTGTCTTGGTCAAGACACCAGGCAGGGAAAA GGCGAAAAGCCTGTCTTGGTCAATACACCAGGCAGGGAAAA < 41bp 0.73197601679923 0.333406527510581 0.4633739 0.12340757 prediction 0.463952033598459 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818980 chr1:166818983 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73711 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166818925-166818986
64251 chrX 69711983 69711983 1 + G A CESC 69711980 + 69711960 69712000 41 CCTGTTTGATTATGATCGGACTCGGGACAGCTGCCTGCCAA CCTGTTTGATTATGATCGGACTCAGGACAGCTGCCTGCCAA < 41bp 0.759192335859184 0.5272186354571 0.858016 0.621825 prediction 0.463947400804168 Functional Loss - DLG3 ENSG00000082458 CDS Human protein_coding chrX:69711980 chrX:69711983 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_73714 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:69711970-69712008
64251 chr8 26441409 26441409 1 + C T CESC 26441407 + 26441387 26441427 41 CGGAGGAATTGACGTCCACACTCGTTTCCAGATGCCTGATC CGGAGGAATTGACGTCCACACTTGTTTCCAGATGCCTGATC < 41bp 0.731973542362593 0.441663008147973 0.033383816 0.04946986 prediction 0.463947084725187 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26441407 chr8:26441409 nonsynonymous SNV 0.690 2 23 hm5C_associated_SNPs_73716 0 0 2 GRWD1 POSTAR2 ENCODE chr8:26441399-26441443
64251 chr8 26441410 26441410 1 + G A STAD 26441407 + 26441387 26441427 41 CGGAGGAATTGACGTCCACACTCGTTTCCAGATGCCTGATC CGGAGGAATTGACGTCCACACTCATTTCCAGATGCCTGATC < 41bp 0.731973542362593 0.483588667598917 0.033383816 0.036301285 prediction 0.463947084725187 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26441407 chr8:26441410 nonsynonymous SNV 0.803 3 24 hm5C_associated_SNPs_73717 0 0 2 GRWD1 POSTAR2 ENCODE chr8:26441399-26441443
64251 chr8 28573612 28573612 1 + G A COAD 28573609 + 28573589 28573629 41 ACCATGCTGCGGAATGGGGGCGCGGGGAACGGAGGTCAGAC ACCATGCTGCGGAATGGGGGCGCAGGGAACGGAGGTCAGAC < 41bp 0.731973140585241 0.497045450431289 0.77533805 0.6561854 prediction 0.463946281170483 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28573609 chr8:28573612 synonymous SNV . 0 24 hm5C_associated_SNPs_73719 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28573592-28573615
64251 chrX 153060173 153060173 1 + G T BRCA 153060170 + 153060150 153060190 41 CGATGGCATCTCTCGGCGCCCTGGCGCTGCTCCTGCTGTCC CGATGGCATCTCTCGGCGCCCTGTCGCTGCTCCTGCTGTCC < 41bp 0.731970835316526 0.33158494567069 0.81789374 0.27716884 prediction 0.463941670633051 Functional Loss - SSR4 ENSG00000180879 CDS Human protein_coding chrX:153060170 chrX:153060173 nonsynonymous SNV 0.837 0 24 hm5C_associated_SNPs_73720 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153060101-153060209
64251 chr19 44611218 44611218 1 + G T UCEC 44611215 + 44611195 44611235 41 TAAGAGCTTCTGTGGTAGATCAAGACTTAATAGGCATTCCA TAAGAGCTTCTGTGGTAGATCAATACTTAATAGGCATTCCA < 41bp 0.731960893367645 0.338041066709193 0.30329084 0.124004364 prediction 0.46392178673529 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611215 chr19:44611218 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73724 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44611188-44611307
64251 chr5 140855856 140855856 1 + T C GBM 140855855 + 140855835 140855875 41 TCGCGAACCTTGGTTTGGATCTCGGTAGCCTCTCAGCCCGC TCGCGAACCTTGGTTTGGATCCCGGTAGCCTCTCAGCCCGC < 41bp 0.742048822114743 0.510088447968202 0.82416743 0.87241864 prediction 0.463920748293081 Functional Loss - PCDHGC3 ENSG00000240184 CDS Human protein_coding chr5:140855855 chr5:140855856 nonsynonymous SNV 0.993 0 22 hm5C_associated_SNPs_73726 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:140855845-140855875
64251 chr16 84778796 84778796 1 + A T LUAD 84778792 + 84778772 84778812 41 CCCGGAGCACTCGGCAGTGACACCAGGACTGCAGGGCAGCC CCCGGAGCACTCGGCAGTGACACCTGGACTGCAGGGCAGCC < 41bp 0.884350849450758 0.652390718189399 0.42324495 0.28866038 prediction 0.463920262522717 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778792 chr16:84778796 nonsynonymous SNV 0.930 3 25 hm5C_associated_SNPs_73727 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:84778760-84778860
64251 chr2 99812092 99812092 1 + C T STAD 99812090 + 99812070 99812110 41 GCAGAGGAGAACATGTCTAACACGTGCCTCAAAAGCACTGG GCAGAGGAGAACATGTCTAACATGTGCCTCAAAAGCACTGG < 41bp 0.784955083200482 0.553005565376382 0.08076951 0.029179573 prediction 0.4638990356482 Functional Loss - MRPL30 ENSG00000185414;ENSG00000241962 CDS Human other chr2:99812090 chr2:99812092 nonsynonymous SNV 0.960 1 23 hm5C_associated_SNPs_73731 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:99812084-99812109
64251 chr3 101443556 101443556 1 + C T LUAD 101443554 + 101443534 101443574 41 GCGTGGACGCGGCTTTGCCTCCCGGAGAAGGTAAGGCGATC GCGTGGACGCGGCTTTGCCTCCTGGAGAAGGTAAGGCGATC < 41bp 0.733260787039368 0.501311288106557 0.7118928 0.3904517 prediction 0.463898997865622 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101443554 chr3:101443556 synonymous SNV . 0 23 hm5C_associated_SNPs_73732 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:101443524-101443559
64251 chr19 39116671 39116671 1 + G A LUSC 39116668 + 39116648 39116688 41 TTAATGCTTCCTCCTCCCAGCAAGAAGAACGGCCAATCCGA TTAATGCTTCCTCCTCCCAGCAAAAAGAACGGCCAATCCGA < 41bp 0.773682746398109 0.54173495487072 0.20051593 0.13492456 prediction 0.463895583054777 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39116668 chr19:39116671 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_73733 0 0 6 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:39116660-39116680
64251 chr19 41826289 41826289 1 + G A UCEC 41826286 + 41826266 41826306 41 TCGGAGGCCTGGGTTCCCGACTCGGAGGAGAGGCTGATCCT TCGGAGGCCTGGGTTCCCGACTCAGAGGAGAGGCTGATCCT < 41bp 0.770865437911424 0.538919534204663 0.33837914 0.27610856 prediction 0.463891807413521 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41826286 chr19:41826289 synonymous SNV . 0 24 hm5C_associated_SNPs_73736 0 0 1 SRSF1 POSTAR2 ENCODE chr19:41826247-41826345
64251 chr19 33696315 33696315 1 + C T rs3745978 33696313 + 33696293 33696333 41 AGCCTCCAGGCAGCCTGTGCCCCGGGGGGACCTTCCCATGC AGCCTCCAGGCAGCCTGTGCCCTGGGGGGACCTTCCCATGC < 41bp 0.74481344634477 0.512869037666152 0.5654856 0.48856124 prediction 0.463888817357236 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696313 chr19:33696315 synonymous SNV . 0 23 hm5C_associated_SNPs_73737 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:33696286-33696316
64251 chr6 13977498 13977498 1 + A C BRCA 13977497 + 13977477 13977517 41 GTTTGTGCCAAATGCCTCTACAAGATCATAGACTTTGGGGA GTTTGTGCCAAATGCCTCTACCAGATCATAGACTTTGGGGA < 41bp 0.776817510580794 0.544874300446437 0.067941934 0.12403673 prediction 0.463886420268715 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977497 chr6:13977498 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_73738 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977461-13977549
64251 chrX 41206679 41206679 1 + C T HNSC 41206677 + 41206657 41206697 41 GCCGCAGTGGCGGAGGTGGCCACGGTAGCAGCAGAGGATTT GCCGCAGTGGCGGAGGTGGCCATGGTAGCAGCAGAGGATTT < 41bp 0.803758272082878 0.571817007182003 0.851792 0.84443736 prediction 0.46388252980175 Functional Loss - DDX3X ENSG00000215301 CDS Human protein_coding chrX:41206677 chrX:41206679 synonymous SNV . 0 23 hm5C_associated_SNPs_73740 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:41206660-41206680
64251 chr10 13214724 13214724 1 + G T UCEC 13214721 + 13214701 13214741 41 GCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTC GCTTGATGTCCCTGCGCTACCAATAACCAAGAGGGTGGCTC < 41bp 0.925508367224931 0.693569381460269 0.57479596 0.07705641 prediction 0.463877971529324 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13214721 chr10:13214724 nonsynonymous SNV 0.065 1 24 hm5C_associated_SNPs_73741 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:13214696-13214724
64251 chr7 150020563 150020563 1 + G C rs566237395 150020562 + 150020542 150020582 41 GGGCTGCGGCTCTTACCTGCCGAGGAGGCGCCGGCTCTGCG GGGCTGCGGCTCTTACCTGCCCAGGAGGCGCCGGCTCTGCG < 41bp 0.731937845314456 0.425011749354701 0.9017224 0.4242758 prediction 0.463875690628912 Functional Loss - ACTR3C;LRRC61 ENSG00000106526 CDS Human protein_coding chr7:150020562 chr7:150020563 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_73742 0 0 11 EIF3G POSTAR2 GSE65004,GSM1585675 chr7:150020552-150020580
64251 chr18 9102712 9102712 1 + G T rs139650842 9102709 + 9102689 9102729 41 CGCTCGGGATTCTCGCCTGGCGCGGCTGGGGAAGGTGAACA CGCTCGGGATTCTCGCCTGGCGCTGCTGGGGAAGGTGAACA < 41bp 0.851208429556001 0.619271890108992 0.334028 0.18656063 prediction 0.463873078894017 Functional Loss - NDUFV2 ENSG00000178127 UTR5 Human protein_coding chr18:9102709 chr18:9102712 . . 0 24 hm5C_associated_SNPs_73745 1 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:9102696-9102712
64251 chr4 25415296 25415296 1 + C T UCEC 25415294 + 25415274 25415314 41 TTTGCTGTTTCCTTATTATCCTCGAAAATCATTGCATTTTG TTTGCTGTTTCCTTATTATCCTTGAAAATCATTGCATTTTG < 41bp 0.845318311599235 0.613387062116232 0.5583216 0.030326635 prediction 0.463862498966008 Functional Loss - ANAPC4 ENSG00000053900 CDS Human protein_coding chr4:25415294 chr4:25415296 stopgain 1.000 1 23 hm5C_associated_SNPs_73751 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:25415270-25415297
64251 chr9 140111154 140111154 1 + G A rs58383921 140111151 + 140111131 140111171 41 TTCCCAGTCAAGGTGGTGGCCTGGGCCGCTCCACCTCACCG TTCCCAGTCAAGGTGGTGGCCTGAGCCGCTCCACCTCACCG < 41bp 0.759556387277431 0.527632724360505 0.8661761 0.74032164 prediction 0.463847325833851 Functional Loss - NDOR1 ENSG00000188566 UTR3 Human protein_coding chr9:140111151 chr9:140111154 . . 0 24 hm5C_associated_SNPs_73753 0 0 2 BUD13 POSTAR2 ENCODE chr9:140111133-140111178
64251 chr19 57132791 57132791 1 + G T HNSC 57132789 + 57132769 57132809 41 GTGGGAACCAGGCAGCTGGCCAGAGAGGCCGCGGGGAGATG GTGGGAACCAGGCAGCTGGCCATAGAGGCCGCGGGGAGATG < 41bp 0.731922313021045 0.378241361938141 0.6414928 0.5497278 prediction 0.46384462604209 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57132789 chr19:57132791 stopgain 0.003 0 23 hm5C_associated_SNPs_73756 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:57132790-57132791
64251 chr4 164436521 164436521 1 + G T UCEC 164436519 + 164436499 164436539 41 ATTGAGTTACATAACAGTATCAGGGACAGGCAGGGGAGGCG ATTGAGTTACATAACAGTATCATGGACAGGCAGGGGAGGCG < 41bp 0.892990920331267 0.661077308058695 0.8913758 0.2567705 prediction 0.463827224545144 Functional Loss - TMA16 ENSG00000198498 CDS Human protein_coding chr4:164436519 chr4:164436521 nonsynonymous SNV 0.959 2 23 hm5C_associated_SNPs_73764 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:164436508-164436537
64251 chr9 133346226 133346226 1 + C T rs10901072 133346224 + 133346204 133346244 41 CTGTCTCTTTCCTGCAGCAACACGGGATTCCCATCCCGGTC CTGTCTCTTTCCTGCAGCAACATGGGATTCCCATCCCGGTC < 41bp 0.806980385644868 0.575070359622191 0.48099864 0.79995126 prediction 0.463820052045354 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133346224 chr9:133346226 synonymous SNV . 0 23 hm5C_associated_SNPs_73767 2 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:133346220-133346241
64251 chr12 119583327 119583327 1 + C T LUSC 119583325 + 119583305 119583345 41 GCAAACCAGCTCAGCCAGGTCTCGGGGCCAGGAGAAGGGGA GCAAACCAGCTCAGCCAGGTCTTGGGGCCAGGAGAAGGGGA < 41bp 0.731909953365307 0.446534370026577 0.14858517 0.38964236 prediction 0.463819906730614 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119583325 chr12:119583327 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_73768 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119583180-119583340
64251 chr16 8858626 8858626 1 + C T UCEC 8858624 + 8858604 8858644 41 AAAGGGATGTCCCAGCTCATCACCATGGCCTGCGGCTCCTG AAAGGGATGTCCCAGCTCATCATCATGGCCTGCGGCTCCTG < 41bp 0.852283294427136 0.620378113504327 0.10376182 0.12528619 prediction 0.463810361845619 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8858624 chr16:8858626 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_73771 0 0 2 EIF3D POSTAR2 ENCODE chr16:8858594-8858637
64251 chr6 26199817 26199817 1 + C T PRAD 26199815 + 26199795 26199835 41 ACCTGCTAAGTCCGCTCCTGCTCCAAAAAAGGGCTCCAAAA ACCTGCTAAGTCCGCTCCTGCTTCAAAAAAGGGCTCCAAAA < 41bp 0.772471688208095 0.540567004011724 0.91257524 0.31259805 prediction 0.463809368392741 Functional Loss - HIST1H2BF ENSG00000197846 CDS Human other chr6:26199815 chr6:26199817 nonsynonymous SNV 0.389 1 23 hm5C_associated_SNPs_73772 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26199760-26199880
64251 chr5 148730810 148730810 1 + G A UCEC 148730807 + 148730787 148730827 41 GCCGCACCATTAGGCTTGCCCGAGTGGAAGTGGCAGTGGAG GCCGCACCATTAGGCTTGCCCGAATGGAAGTGGCAGTGGAG < 41bp 0.735152170191639 0.503251836367737 0.55865616 0.28997993 prediction 0.463800667647804 Functional Loss - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148730807 chr5:148730810 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_73775 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr5:148730772-148730833
64251 chr19 40480518 40480518 1 + C T LGG 40480516 + 40480496 40480536 41 GAGGCCGTGGAGCTCCCGCTCACGCATTTCGAGCTCTACAA GAGGCCGTGGAGCTCCCGCTCATGCATTTCGAGCTCTACAA < 41bp 0.816177627479855 0.584291410681179 0.3660419 0.7487923 prediction 0.463772433597352 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480516 chr19:40480518 nonsynonymous SNV 0.039 5 23 hm5C_associated_SNPs_73779 0 0 4 GRWD1 POSTAR2 ENCODE chr19:40480492-40480540
64251 chr14 101351056 101351056 1 + C T SKCM 101351054 + 101351034 101351074 41 TTGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGG TTGGATGAGCCCTCGGAGGACTTCATTTGTTTTGATGATGG < 41bp 0.787050529115365 0.555172340951431 0.95401096 0.24178645 prediction 0.463756376327868 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101351054 chr14:101351056 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_73785 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101351040-101351060
64251 chr2 65245340 65245340 1 + G A UCEC 65245337 + 65245317 65245357 41 GCCATCTTCCAGTGTGTGGCCGCGGTGTTCATTGCGCAACT GCCATCTTCCAGTGTGTGGCCGCAGTGTTCATTGCGCAACT < 41bp 0.731875598555223 0.493122257260584 0.80373585 0.7038427 prediction 0.463751197110447 Functional Loss - SLC1A4 ENSG00000115902 CDS Human protein_coding chr2:65245337 chr2:65245340 synonymous SNV . 0 24 hm5C_associated_SNPs_73787 0 0 3 RPS3 POSTAR2 ENCODE chr2:65245326-65245360
64251 chr11 64854058 64854058 1 + G A STAD 64854055 + 64854035 64854075 41 GCTGGCCACAGTCAACTGGGCCCGGGCAGGACTGGGCCTCC GCTGGCCACAGTCAACTGGGCCCAGGCAGGACTGGGCCTCC < 41bp 0.765334443674767 0.533471328930919 0.22603673 0.15891275 prediction 0.463726229487695 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854055 chr11:64854058 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73795 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:64854032-64854063
64251 chr6 12121553 12121553 1 + G A LIHC 12121550 + 12121530 12121570 41 CTGATGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAG CTGATGAGAGACAGCATGACCTGAGCGCCATGGAGCTGCAG < 41bp 0.751865771919373 0.520003378687146 0.46495005 0.12987587 prediction 0.463724786464456 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12121550 chr6:12121553 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_73796 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr6:12121549-12121570
64251 chr17 18088106 18088106 1 + C T BLCA 18088104 + 18088084 18088124 41 TGGTGGAGCACCGCGTCATCCCCGAGGGCTTCGTCAACAGC TGGTGGAGCACCGCGTCATCCCTGAGGGCTTCGTCAACAGC < 41bp 0.807534314232862 0.575672064921105 0.2549125 0.06890151 prediction 0.463724498623514 Functional Loss - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18088104 chr17:18088106 synonymous SNV . 0 23 hm5C_associated_SNPs_73797 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:18088076-18088114
64251 chr20 44463645 44463645 1 + C T PAAD 44463643 + 44463623 44463663 41 GTGGGGCAGTCAGCTCCTGGCGCGGCAGCTGCAGGATTTCT GTGGGGCAGTCAGCTCCTGGCGTGGCAGCTGCAGGATTTCT < 41bp 0.735126434272804 0.503266736508163 0.468331 0.43177754 prediction 0.463719395529281 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44463643 chr20:44463645 nonsynonymous SNV 0.009 3 23 hm5C_associated_SNPs_73799 0 0 1 DDX6 POSTAR2 ENCODE chr20:44463610-44463649
64251 chr1 1459243 1459243 1 + G A rs573924414 1459240 + 1459220 1459260 41 CCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACA CCAGCCTGGAAGCACGGGTGCGCAACATCGCCATAGCAACA < 41bp 0.764922901141656 0.533066438043075 0.39659703 0.14831993 prediction 0.463712926197162 Functional Loss - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1459240 chr1:1459243 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_73800 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1459238-1459265
64251 chr17 79078359 79078359 1 + T C STAD 79078358 + 79078338 79078378 41 CGAGCTCCATGGCAGCCGGCCTGGAGCGCAATGGCCGTATG CGAGCTCCATGGCAGCCGGCCCGGAGCGCAATGGCCGTATG < 41bp 0.78868104780476 0.556828845731735 0.4621145 0.4087779 prediction 0.463704404146049 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79078358 chr17:79078359 nonsynonymous SNV 0.214 3 22 hm5C_associated_SNPs_73805 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:79078321-79078375
64251 chr2 197595663 197595663 1 + A C LIHC 197595662 + 197595642 197595682 41 GAAAGAAGCCAGTGTGGAATCAGAACAGGTGAGCCAGACCC GAAAGAAGCCAGTGTGGAATCCGAACAGGTGAGCCAGACCC < 41bp 0.773965809501702 0.542116891199647 0.47030857 0.3280644 prediction 0.46369783660411 Functional Loss - CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197595662 chr2:197595663 synonymous SNV . 0 22 hm5C_associated_SNPs_73807 0 0 5 BUD13 POSTAR2 ENCODE chr2:197595596-197595677
64251 chr15 42130831 42130831 1 + C T rs77608793 42130829 + 42130809 42130849 41 TCAGCCCCTGGCAGCAAGCTCTCCAGGCTGGGATTGCAGGG TCAGCCCCTGGCAGCAAGCTCTTCAGGCTGGGATTGCAGGG < 41bp 0.761114152343504 0.529265284179522 0.9537442 0.32641378 prediction 0.463697736327966 Functional Loss - JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708 intronic Human other chr15:42130829 chr15:42130831 . . 0 23 hm5C_associated_SNPs_73809 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:42130819-42130839
64251 chrX 105970490 105970490 1 + G A COAD 105970487 + 105970467 105970507 41 GGGAAGCACCGTGCAAGTCTCTTGGTTGGCCCTCATCCAAC GGGAAGCACCGTGCAAGTCTCTTAGTTGGCCCTCATCCAAC < 41bp 0.776877459065425 0.545031897896565 0.51539975 0.33705768 prediction 0.46369112233772 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970487 chrX:105970490 stopgain 1.000 1 24 hm5C_associated_SNPs_73810 0 0 2 SND1 POSTAR2 ENCODE chrX:105970438-105970523
64251 chr9 102730857 102730857 1 + G T STAD 102730855 + 102730835 102730875 41 TGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGATACAAA TGGTGGGGTGTTGGGCTTCACATGTGGAAAATTGATACAAA < 41bp 0.731842032728365 0.406126314918067 0.9041842 0.4264142 prediction 0.463684065456729 Functional Loss - STX17 ENSG00000136874 CDS Human protein_coding chr9:102730855 chr9:102730857 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_73813 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr9:102730847-102730868
64251 chr6 36179264 36179264 1 + A C STAD 36179263 + 36179243 36179283 41 AGTATCCAATGGGGAGCTGCCAGCAGGGCCCCAGGGGGATG AGTATCCAATGGGGAGCTGCCCGCAGGGCCCCAGGGGGATG < 41bp 0.804099933440065 0.572262035752533 0.29214716 0.07742584 prediction 0.463675795375063 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36179263 chr6:36179264 synonymous SNV . 0 22 hm5C_associated_SNPs_73815 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:36179244-36179289
64251 chr4 38690482 38690482 1 + C T SKCM 38690480 + 38690460 38690500 41 AAAAAAATACTCACCCCCTTCTCCAGGCGTGCAGCCCTTCG AAAAAAATACTCACCCCCTTCTTCAGGCGTGCAGCCCTTCG < 41bp 0.848679665632595 0.616843622048261 0.9469135 0.28893283 prediction 0.463672087168667 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690480 chr4:38690482 nonsynonymous SNV 0.397 1 23 hm5C_associated_SNPs_73816 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:38690457-38690485
64251 chr5 76326695 76326695 1 + A T LUAD 76326691 + 76326671 76326711 41 GGAAGGTGGAGAAGTTGGAACGTGAACTGCGGAGCTGCAAG GGAAGGTGGAGAAGTTGGAACGTGTACTGCGGAGCTGCAAG < 41bp 0.859709103043607 0.627877297011578 0.8231698 0.8164549 prediction 0.463663612064057 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76326691 chr5:76326695 nonsynonymous SNV 0.975 4 25 hm5C_associated_SNPs_73818 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:76326680-76326700
64251 chr5 149391886 149391886 1 + G A UCEC 149391883 + 149391863 149391903 41 ATGTTGCCTCTGCCTGCCTACTCGGTTGTGGAGAACCCCAC ATGTTGCCTCTGCCTGCCTACTCAGTTGTGGAGAACCCCAC < 41bp 0.762397828976044 0.530569544481946 0.06813455 0.0786733 prediction 0.463656568988195 Functional Loss - HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149391883 chr5:149391886 synonymous SNV . 0 24 hm5C_associated_SNPs_73820 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:149391813-149391897
64251 chr1 222903028 222903028 1 + C T TGCT 222903025 + 222903005 222903045 41 GCGGTGAAGCAATCAGGTCTCTCCAAGAAGCAGAAAAATGT GCGGTGAAGCAATCAGGTCTCTCTAAGAAGCAGAAAAATGT < 41bp 0.748058261533661 0.516232549298298 0.9365095 0.8828549 prediction 0.463651424470725 Functional Loss - BROX ENSG00000162819 CDS Human protein_coding chr1:222903025 chr1:222903028 stopgain 1.000 1 24 hm5C_associated_SNPs_73821 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:222903004-222903038
64251 chr11 123493258 123493258 1 + C T COAD 123493256 + 123493236 123493276 41 TTCAGAACGGCATCAGGTCCCGCGACTACACGTCGGAAAGT TTCAGAACGGCATCAGGTCCCGTGACTACACGTCGGAAAGT < 41bp 0.833148285838646 0.601326612927152 0.3650929 0.33113807 prediction 0.463643345822987 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123493256 chr11:123493258 synonymous SNV . 0 23 hm5C_associated_SNPs_73824 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:123493240-123493260
64251 chr18 29797785 29797785 1 + C T rs200254969 29797783 + 29797763 29797803 41 GTGTGAAAAGAGAGGCTCCACCCGAGACACCATAGTCATTG GTGTGAAAAGAGAGGCTCCACCTGAGACACCATAGTCATTG < 41bp 0.834272285962528 0.602451927883677 0.04180637 0.032021463 prediction 0.463640716157702 Functional Loss - MEP1B ENSG00000141434 CDS Human protein_coding chr18:29797783 chr18:29797785 stopgain 0.344 0 23 hm5C_associated_SNPs_73826 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29797751-29797788
64251 chr1 161130616 161130616 1 + G T LUAD 161130614 + 161130594 161130634 41 GGCCAGGTCTGCCTGATGAACGGCTCAAGAAACTGGAGCTG GGCCAGGTCTGCCTGATGAACGTCTCAAGAAACTGGAGCTG < 41bp 0.731815959627199 0.37847146171052 0.6732875 0.69510084 prediction 0.463631919254398 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130614 chr1:161130616 synonymous SNV . 0 23 hm5C_associated_SNPs_73829 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161130578-161130622
64251 chr9 135929329 135929329 1 + G A UCEC 135929326 + 135929306 135929346 41 GAATCCGTTGTGGAATGAAACACGGTAAAAATTCCTGAAAG GAATCCGTTGTGGAATGAAACACAGTAAAAATTCCTGAAAG < 41bp 0.748892484953332 0.517082231420113 0.9388539 0.78508186 prediction 0.463620507066438 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929326 chr9:135929329 nonsynonymous SNV 0.901 3 24 hm5C_associated_SNPs_73831 0 0 1 DDX24 POSTAR2 ENCODE chr9:135929292-135929330
64251 chr2 202900525 202900525 1 + G A COAD 202900522 + 202900502 202900542 41 TCGCAGTACTTCCACCTGGCCGCGTGGGCCGTGCCCGCCGT TCGCAGTACTTCCACCTGGCCGCATGGGCCGTGCCCGCCGT < 41bp 0.770747615515352 0.538939361040764 0.26399457 0.15885255 prediction 0.463616508949176 Functional Loss - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202900522 chr2:202900525 synonymous SNV . 0 24 hm5C_associated_SNPs_73834 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:202900520-202900540
64251 chr16 2257280 2257280 1 + C T STAD 2257278 + 2257258 2257298 41 ACGAGCAGCTGATCCCTGAGCCCGAGGTCTCCATCACGTCC ACGAGCAGCTGATCCCTGAGCCTGAGGTCTCCATCACGTCC < 41bp 0.731806209628809 0.462325846946399 0.10036805 0.07875803 prediction 0.463612419257618 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257278 chr16:2257280 synonymous SNV . 0 23 hm5C_associated_SNPs_73837 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2257259-2257284
64251 chr22 50987888 50987888 1 + C T GBM 50987886 + 50987866 50987906 41 GAACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAGGC GAACAGACGCCTGGACCCCACGTGCGCCACTCCCCGCAGGC < 41bp 0.731801237652918 0.498373329661241 0.2905008 0.27007276 prediction 0.463602475305836 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987886 chr22:50987888 synonymous SNV . 0 23 hm5C_associated_SNPs_73840 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr22 50987889 50987889 1 + G A STAD 50987886 + 50987866 50987906 41 GAACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAGGC GAACAGACGCCTGGACCCCACGCACGCCACTCCCCGCAGGC < 41bp 0.731801237652918 0.477113576036852 0.2905008 0.037400305 prediction 0.463602475305836 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987886 chr22:50987889 nonsynonymous SNV 0.046 3 24 hm5C_associated_SNPs_73841 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr17 16285701 16285701 1 + G T LUAD 16285698 + 16285678 16285718 41 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCAC ATGCAGATCTTCGTGAAGACCCTTACCGGCAAGACCATCAC < 41bp 0.731798801451006 0.340079325967979 0.2405546 0.26177287 prediction 0.463597602902012 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285698 chr17:16285701 synonymous SNV . 0 24 hm5C_associated_SNPs_73845 0 0 34 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:16285680-16285720
64251 chr8 145746021 145746021 1 + C T rs569308081 145746019 + 145745999 145746039 41 GCCTGTCTGTGATCATCCCACACGTGGCCCGCTTCCAGCAC GCCTGTCTGTGATCATCCCACATGTGGCCCGCTTCCAGCAC < 41bp 0.781926509975321 0.550135602243961 0.19628742 0.17962801 prediction 0.463581815462721 Functional Loss - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145746019 chr8:145746021 synonymous SNV . 0 23 hm5C_associated_SNPs_73852 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145745975-145746021
64251 chr8 21844684 21844684 1 + G A SKCM 21844681 + 21844661 21844701 41 GCTGATGAACCTAACAGATTCTCGTTTGGCCCAGGCGGGTA GCTGATGAACCTAACAGATTCTCATTTGGCCCAGGCGGGTA < 41bp 0.751592562215911 0.51980186201486 0.075918466 0.064629436 prediction 0.463581400402101 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844681 chr8:21844684 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_73853 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr8:21844664-21844702
64251 chr19 42799090 42799090 1 + C T STAD 42799088 + 42799068 42799108 41 ATCATGCAGGCTGCCACTCCCACGGAGCAGCCCCCTGGAGC ATCATGCAGGCTGCCACTCCCATGGAGCAGCCCCCTGGAGC < 41bp 0.773841323483679 0.54205520118571 0.80028284 0.73945946 prediction 0.463572244595939 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42799088 chr19:42799090 nonsynonymous SNV 0.982 2 23 hm5C_associated_SNPs_73855 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42799088-42799125
64251 chr8 21958395 21958395 1 + G A HNSC 21958392 + 21958372 21958412 41 CCTACTTCACCGACAGCTTCCTGGATTCCGGCTTTCAAACT CCTACTTCACCGACAGCTTCCTGAATTCCGGCTTTCAAACT < 41bp 0.759460082003748 0.527675815117968 0.043862462 0.0188964 prediction 0.46356853377156 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958392 chr8:21958395 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_73857 0 0 2 GRWD1 POSTAR2 ENCODE chr8:21958385-21958480
64251 chr3 127396377 127396377 1 + G A SKCM 127396374 + 127396354 127396394 41 GCTGCCCTGACATCTGCTTCCGAGTGGCTGGCTGCAGCTTC GCTGCCCTGACATCTGCTTCCGAATGGCTGGCTGCAGCTTC < 41bp 0.762531743476341 0.530753032484326 0.7381835 0.3156319 prediction 0.46355742198403 Functional Loss - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127396374 chr3:127396377 nonsynonymous SNV 0.848 4 24 hm5C_associated_SNPs_73858 0 0 1 PPIG POSTAR2 ENCODE chr3:127396370-127396432
64251 chr8 74893475 74893475 1 + A C HNSC 74893471 + 74893451 74893491 41 TACACAAAATAATGCTATTTCTGAAAGTGTGCCTCTGCCTA TACACAAAATAATGCTATTTCTGACAGTGTGCCTCTGCCTA < 41bp 0.731776391046216 0.336357718805756 0.15263885 0.036432803 prediction 0.463552782092431 Functional Loss - TMEM70 ENSG00000175606 CDS Human protein_coding chr8:74893471 chr8:74893475 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_73859 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:74893421-74893519
64251 chr8 128428510 128428510 1 + G A SKCM 128428507 + 128428487 128428527 41 AAGGAGAAGCTAGAGCAAAACCCGGAGAAGTCCCAGGACAT AAGGAGAAGCTAGAGCAAAACCCAGAGAAGTCCCAGGACAT < 41bp 0.731774077283156 0.483641515839319 0.5627019 0.24097931 prediction 0.463548154566312 Functional Loss - POU5F1B ENSG00000212993 CDS Human protein_coding chr8:128428507 chr8:128428510 synonymous SNV . 0 24 hm5C_associated_SNPs_73862 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr8:128428500-128428520
64251 chr1 201798353 201798353 1 + G T CESC 201798351 + 201798331 201798371 41 AGAAAAGATGGCGGCGGCGGCGGCAGCTGGTGCGGCCTCCG AGAAAAGATGGCGGCGGCGGCGTCAGCTGGTGCGGCCTCCG < 41bp 0.891643192642003 0.659870206230557 0.90954226 0.8944495 prediction 0.46354597282289 Functional Loss - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201798351 chr1:201798353 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_73863 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:201798340-201798360
64251 chr16 87678075 87678075 1 + C T rs138715600 87678073 + 87678053 87678093 41 TGTCCCGCGGGGGCTTCGTGCTCGTGGCCCACAGTGACTCC TGTCCCGCGGGGGCTTCGTGCTTGTGGCCCACAGTGACTCC < 41bp 0.7317719212635 0.466188723697712 0.4358523 0.24693733 prediction 0.463543842527 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678073 chr16:87678075 synonymous SNV . 0 23 hm5C_associated_SNPs_73864 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:87678075-87678076
64251 chr16 87678076 87678076 1 + G A rs9934067 87678073 + 87678053 87678093 41 TGTCCCGCGGGGGCTTCGTGCTCGTGGCCCACAGTGACTCC TGTCCCGCGGGGGCTTCGTGCTCATGGCCCACAGTGACTCC < 41bp 0.7317719212635 0.48307842729763 0.4358523 0.35107267 prediction 0.463543842527 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678073 chr16:87678076 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_73865 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:87678075-87678076
64251 chr21 46640924 46640924 1 + G A ACC 46640921 + 46640901 46640941 41 ACTGTCGCTGGATGCGTGTGCACGGCAAGGTACTGAGGCGC ACTGTCGCTGGATGCGTGTGCACAGCAAGGTACTGAGGCGC < 41bp 0.742432100814014 0.510667546938966 0.73881483 0.2385265 prediction 0.463529107750096 Functional Loss - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46640921 chr21:46640924 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_73869 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:46640899-46640925
64251 chr17 41006599 41006599 1 + G A PAAD 41006596 + 41006576 41006616 41 TGGAGGAGCAGGCCGCCTTCCTCGTGGGAAGCGCCACCCCT TGGAGGAGCAGGCCGCCTTCCTCATGGGAAGCGCCACCCCT < 41bp 0.786235042795975 0.554472444253236 0.118638724 0.07081795 prediction 0.463525197085477 Functional Loss - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006596 chr17:41006599 nonsynonymous SNV 0.010 0 24 hm5C_associated_SNPs_73870 0 0 1 PPIG POSTAR2 ENCODE chr17:41006505-41006620
64251 chr2 101192906 101192906 1 + C T GBM 101192904 + 101192884 101192924 41 ATTGAAGACGTGTTGCTGTCCTCAGTGCGGCGCTCTGTCCT ATTGAAGACGTGTTGCTGTCCTTAGTGCGGCGCTCTGTCCT < 41bp 0.818951732989186 0.587202410766389 0.11618805 0.067163885 prediction 0.463498644445593 Functional Loss - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101192904 chr2:101192906 nonsynonymous SNV 0.222 2 23 hm5C_associated_SNPs_73874 0 0 1 UCHL5 POSTAR2 ENCODE chr2:101192841-101192912
64251 chr6 44116336 44116336 1 + A C LUSC 44116332 + 44116312 44116352 41 CCTCATCCTGCAGCGAGTCCCTGCACATCTCCAACTGGACC CCTCATCCTGCAGCGAGTCCCTGCCCATCTCCAACTGGACC < 41bp 0.731742883455616 0.299295161963335 0.013071775 0.00462389 prediction 0.463485766911233 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116332 chr6:44116336 nonsynonymous SNV 0.847 1 25 hm5C_associated_SNPs_73878 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:44116304-44116344
64251 chr1 207307917 207307917 1 + G A BLCA 207307914 + 207307894 207307934 41 AGGAGATGGCACGTGGAGTCCCCGAACACCATCATGTGGAG AGGAGATGGCACGTGGAGTCCCCAAACACCATCATGTGGAG < 41bp 0.750898772402901 0.5191630555842 0.18086591 0.5542276 prediction 0.463471433637402 Functional Loss - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207307914 chr1:207307917 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_73884 0 0 2 SND1 POSTAR2 ENCODE chr1:207307896-207307930
64251 chr16 2816657 2816657 1 + G A GBM 2816654 + 2816634 2816674 41 ACTGTTACCACGCAAACGTTCTCGAAGTCGCTCACCACTTG ACTGTTACCACGCAAACGTTCTCAAAGTCGCTCACCACTTG < 41bp 0.733092619048735 0.501358418854695 0.60535294 0.26302478 prediction 0.463468400388079 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816654 chr16:2816657 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73885 0 0 14 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816600-2816680
64251 chr21 37775114 37775114 1 + G C LGG 37775110 + 37775090 37775130 41 TGAAGTCTTTCTTCCGTAGACTGAGTTTCACTCCCGACGGA TGAAGTCTTTCTTCCGTAGACTGACTTTCACTCCCGACGGA < 41bp 0.731731512793121 0.439330787475955 0.35343307 0.28244472 prediction 0.463463025586242 Functional Loss - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37775110 chr21:37775114 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_73888 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr21:37775091-37775136
64251 chr8 30034704 30034704 1 + C T STAD 30034702 + 30034682 30034722 41 CCAAAACCTATGATCATTGGCACCAATAATGTGTTTGAAGT CCAAAACCTATGATCATTGGCATCAATAATGTGTTTGAAGT < 41bp 0.731730208162458 0.438456304927463 0.0147538185 0.031024903 prediction 0.463460416324916 Functional Loss - DCTN6 ENSG00000104671 CDS Human protein_coding chr8:30034702 chr8:30034704 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_73890 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:30034696-30034707
64251 chr1 150471087 150471087 1 + C T UCEC 150471085 + 150471065 150471105 41 TGGTGGTCTGGGGGGACTGACCCGACTGCGGTGCTTCCAGC TGGTGGTCTGGGGGGACTGACCTGACTGCGGTGCTTCCAGC < 41bp 0.849307807192966 0.617578067436856 0.6722167 0.83668935 prediction 0.463459479512221 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150471085 chr1:150471087 stopgain 0.466 1 23 hm5C_associated_SNPs_73891 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150471079-150471107
64251 chr11 22747884 22747884 1 + G A COAD 22747881 + 22747861 22747901 41 ATGCAAAACCAGTGCACCCTCGGGCTCCTTTTTTGCCAGAG ATGCAAAACCAGTGCACCCTCGGACTCCTTTTTTGCCAGAG < 41bp 0.745254761864887 0.513525566555248 0.8830565 0.40377995 prediction 0.463458390619278 Functional Loss - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22747881 chr11:22747884 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_73892 0 0 2 GRWD1 POSTAR2 ENCODE chr11:22747837-22747895
64251 chr1 156024741 156024741 1 + A C STAD 156024737 + 156024717 156024757 41 CAAGCCAACACTGGAGGCGTCCAGAGCACCCTGTGAGTGCA CAAGCCAACACTGGAGGCGTCCAGCGCACCCTGTGAGTGCA < 41bp 0.73172543942269 0.33697712955965 0.2816611 0.17441326 prediction 0.46345087884538 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156024737 chr1:156024741 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_73895 0 0 3 DDX3X POSTAR2 ENCODE chr1:156024608-156024747
64251 chr11 61488319 61488319 1 + G A UCEC 61488316 + 61488296 61488336 41 ATGCGCGGGGGCATCCTCTACACGGAGCCCCGTGACTCCAT ATGCGCGGGGGCATCCTCTACACAGAGCCCCGTGACTCCAT < 41bp 0.76999852834698 0.538273642975367 0.7304573 0.44519714 prediction 0.463449770743225 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61488316 chr11:61488319 synonymous SNV . 0 24 hm5C_associated_SNPs_73896 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:61488278-61488328
64251 chr15 41591475 41591475 1 + G A rs80024738 41591472 + 41591452 41591492 41 GGATTACAGGCGCGCACCACCACGCTCAGCCTGATTTCTAG GGATTACAGGCGCGCACCACCACACTCAGCCTGATTTCTAG < 41bp 0.76359750661758 0.531879375902869 0.31976646 0.10076192 prediction 0.463436261429423 Functional Loss - OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41591472 chr15:41591475 . . 0 24 hm5C_associated_SNPs_73901 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41591448-41591484
64251 chr1 212254045 212254045 1 + C T ESCA 212254043 + 212254023 212254063 41 CCAGGAGGTGATAAACTTTCCACGGTGGGTTGGGCCTCTCA CCAGGAGGTGATAAACTTTCCATGGTGGGTTGGGCCTCTCA < 41bp 0.828874240108921 0.597159012978425 0.4672082 0.4797702 prediction 0.463430454260991 Functional Loss - DTL ENSG00000143476 CDS Human protein_coding chr1:212254043 chr1:212254045 nonsynonymous SNV 0.981 0 23 hm5C_associated_SNPs_73904 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212254019-212254064
64251 chr14 71444452 71444452 1 + G A rs149375520 71444449 + 71444429 71444469 41 AGTACCAACAGTGGGGTTCACGAGGCCAAGGACCCCACCCC AGTACCAACAGTGGGGTTCACGAAGCCAAGGACCCCACCCC < 41bp 0.742433417253778 0.510723142058156 0.92063856 0.85544777 prediction 0.463420550391245 Functional Loss - PCNX1 ENSG00000100731 CDS Human protein_coding chr14:71444449 chr14:71444452 synonymous SNV . 0 24 hm5C_associated_SNPs_73906 0 0 1 EIF3H POSTAR2 ENCODE chr14:71444323-71444468
64251 chr3 179426668 179426668 1 + G T LUAD 179426666 + 179426646 179426686 41 TTTGACAGCTCTGGGGGCAACGGGCATGCGCTGGAGCATTA TTTGACAGCTCTGGGGGCAACGTGCATGCGCTGGAGCATTA < 41bp 0.73170710250603 0.377693096715859 0.77053106 0.64446235 prediction 0.463414205012059 Functional Loss - USP13 ENSG00000058056 CDS Human protein_coding chr3:179426666 chr3:179426668 nonsynonymous SNV 0.474 4 23 hm5C_associated_SNPs_73907 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:179426660-179426680
64251 chr10 18828318 18828318 1 + T C LUAD 18828317 + 18828297 18828337 41 AGTGGGACAAGTCGCGGCCTCTCCAGGCAAGAGACATTTGA AGTGGGACAAGTCGCGGCCTCCCCAGGCAAGAGACATTTGA < 41bp 0.744160270489463 0.512455756113781 0.93191636 0.07281393 prediction 0.463409028751363 Functional Loss - CACNB2 ENSG00000165995 CDS Human protein_coding chr10:18828317 chr10:18828318 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_73909 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:18828296-18828323
64251 chrX 21900747 21900747 1 + G T UCEC 21900744 + 21900724 21900764 41 TTTTGGCTGCCAATGTGACCCTGGGACTCTGGATGGTTACA TTTTGGCTGCCAATGTGACCCTGTGACTCTGGATGGTTACA < 41bp 0.731703893601228 0.353918339121759 0.33014262 0.039210826 prediction 0.463407787202456 Functional Loss - MBTPS2 ENSG00000012174 CDS Human protein_coding chrX:21900744 chrX:21900747 stopgain 1.000 1 24 hm5C_associated_SNPs_73911 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chrX:21900720-21900753
64251 chr11 57235182 57235182 1 + G T OV 57235179 + 57235159 57235199 41 TGCTACTCATCCCCGCCCACCGTGAGCTGCCAGGCCAACAA TGCTACTCATCCCCGCCCACCGTTAGCTGCCAGGCCAACAA < 41bp 0.731691024260297 0.341175231907946 0.24553841 0.02798742 prediction 0.463382048520594 Functional Loss - RTN4RL2 ENSG00000186907 CDS Human protein_coding chr11:57235179 chr11:57235182 synonymous SNV . 0 24 hm5C_associated_SNPs_73917 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57235149-57235217
64251 chr16 1395034 1395034 1 + C T HNSC 1395032 + 1395012 1395052 41 AAGATGACCCTGGAGGTGGCCTCGGGGCTCTTTGAGCTCTA AAGATGACCCTGGAGGTGGCCTTGGGGCTCTTTGAGCTCTA < 41bp 0.731688379844209 0.453163331685284 0.66105133 0.289985 prediction 0.463376759688418 Functional Loss - BAIAP3 ENSG00000007516 CDS Human protein_coding chr16:1395032 chr16:1395034 nonsynonymous SNV 0.994 0 23 hm5C_associated_SNPs_73921 0 0 1 PPIG POSTAR2 ENCODE chr16:1394968-1395047
64251 chr10 60560686 60560686 1 + G A COAD 60560683 + 60560663 60560703 41 TTTTGTTGAAGTAGGCATGCCTCGAAGTCCTTCCCATTCTG TTTTGTTGAAGTAGGCATGCCTCAAAGTCCTTCCCATTCTG < 41bp 0.731684946870139 0.492980015901008 0.8608762 0.8571672 prediction 0.463369893740278 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60560683 chr10:60560686 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73924 0 0 2 HNRNPD POSTAR2 GSE52971,GSM1279667 chr10:60560680-60560720
64251 chr1 201860549 201860549 1 + G T UCEC 201860547 + 201860527 201860567 41 AGGCCAGGAGATTCCAATGACAGGCATCCCAGTGCAGCCAG AGGCCAGGAGATTCCAATGACATGCATCCCAGTGCAGCCAG < 41bp 0.731680434679096 0.377659834515742 0.6036057 0.20596698 prediction 0.463360869358192 Functional Loss - SHISA4 ENSG00000198892 CDS Human protein_coding chr1:201860547 chr1:201860549 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_73928 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:201860531-201860554
64251 chr19 50156464 50156464 1 + G A UCEC 50156461 + 50156441 50156481 41 GCAGCGGGGGCAGTGGTGGCCAGGTGTCGCTGAAGAAGTCC GCAGCGGGGGCAGTGGTGGCCAGATGTCGCTGAAGAAGTCC < 41bp 0.754718988091161 0.523039027374377 0.8642173 0.89944875 prediction 0.463359921433568 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50156461 chr19:50156464 nonsynonymous SNV 0.004 1 24 hm5C_associated_SNPs_73929 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50156441-50156469
64251 chr12 69965192 69965192 1 + T C LIHC 69965191 + 69965171 69965211 41 TCAGACAGAATTGGAAGTCCCTAGAACACCTCGAACACCTA TCAGACAGAATTGGAAGTCCCCAGAACACCTCGAACACCTA < 41bp 0.731670192117222 0.476262027742932 0.25355226 0.19050395 prediction 0.463340384234443 Functional Loss - FRS2 ENSG00000166225 CDS Human protein_coding chr12:69965191 chr12:69965192 synonymous SNV . 0 22 hm5C_associated_SNPs_73933 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69965167-69965206
64251 chr19 36277956 36277956 1 + G T STAD 36277953 + 36277933 36277973 41 AGGAGATGTGCAGCAAGCTCCGGGGAGCCCAGGGCCCACTC AGGAGATGTGCAGCAAGCTCCGGTGAGCCCAGGGCCCACTC < 41bp 0.926014298844201 0.694359190808134 0.9434007 0.8936792 prediction 0.463310216072133 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277953 chr19:36277956 stopgain 0.702 0 24 hm5C_associated_SNPs_73939 0 0 1 PPIG POSTAR2 ENCODE chr19:36277889-36277973
64251 chr1 161130985 161130985 1 + G A CESC 161130982 + 161130962 161131002 41 GCTTCCCATGGCTCCTTCCACATGATATCCGCCCGGTCCTC GCTTCCCATGGCTCCTTCCACATAATATCCGCCCGGTCCTC < 41bp 0.778867951261395 0.547214623653271 0.15798113 0.07435128 prediction 0.463306655216248 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130982 chr1:161130985 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_73941 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:161130945-161130985
64251 chr19 14552023 14552023 1 + G T LUSC 14552020 + 14552000 14552040 41 GGGGCAGACCTGGCGGCCCCCGGGGTACAGCAGCAGCTGGA GGGGCAGACCTGGCGGCCCCCGGTGTACAGCAGCAGCTGGA < 41bp 0.925051292031553 0.693400889023785 0.9102272 0.82387507 prediction 0.463300806015536 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14552020 chr19:14552023 synonymous SNV . 0 24 hm5C_associated_SNPs_73943 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14552006-14552029
64251 chr12 57484919 57484919 1 + G A UCEC 57484916 + 57484896 57484936 41 CCTCCTTCTCAGGCCCAGTGCCCGAGCCATGGCACTGCCTC CCTCCTTCTCAGGCCCAGTGCCCAAGCCATGGCACTGCCTC < 41bp 0.765734846466261 0.534091187361705 0.16918603 0.027610958 prediction 0.463287318209113 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57484916 chr12:57484919 nonsynonymous SNV 0.706 0 24 hm5C_associated_SNPs_73947 0 0 2 BUD13 POSTAR2 ENCODE chr12:57484870-57484929
64251 chr1 44685836 44685836 1 + G A COAD 44685833 + 44685813 44685853 41 GCACCGTCATGAGGCACTGGCCCGGGCTGGTGTGCTAGGGG GCACCGTCATGAGGCACTGGCCCAGGCTGGTGTGCTAGGGG < 41bp 0.769220102401057 0.537577811348753 0.36588567 0.34082144 prediction 0.463284582104607 Functional Loss - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44685833 chr1:44685836 nonsynonymous SNV 0.895 1 24 hm5C_associated_SNPs_73949 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr1:44685820-44685847
64251 chr5 176863232 176863232 1 + G A UCEC 176863229 + 176863209 176863249 41 AGCGGCTGGTGAAGGAGGTCCCCGAGGAGTATTCCGAGCGC AGCGGCTGGTGAAGGAGGTCCCCAAGGAGTATTCCGAGCGC < 41bp 0.782165207431708 0.550523910526519 0.6006347 0.4692602 prediction 0.463282593810377 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863229 chr5:176863232 nonsynonymous SNV 0.574 1 24 hm5C_associated_SNPs_73950 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr5:176863210-176863237
64251 chr17 70117890 70117890 1 + C T COAD 70117888 + 70117868 70117908 41 CATGGTGTGGGCGCAGGCGGCGCGCAGGAAGCTCGCGGACC CATGGTGTGGGCGCAGGCGGCGTGCAGGAAGCTCGCGGACC < 41bp 0.774263880763886 0.542626924381045 0.5605526 0.6128166 prediction 0.463273912765682 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70117888 chr17:70117890 nonsynonymous SNV 0.880 4 23 hm5C_associated_SNPs_73953 0 0 2 RPS3 POSTAR2 ENCODE chr17:70117881-70117920
64251 chr19 39913516 39913516 1 + G A GBM 39913513 + 39913493 39913533 41 AAGGGCTGGAGATGGATGAACGGGGGCCTTCCCCACTCCAC AAGGGCTGGAGATGGATGAACGGAGGCCTTCCCCACTCCAC < 41bp 0.79370426377951 0.562073280887808 0.9347737 0.92069954 prediction 0.463261965783405 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39913513 chr19:39913516 nonsynonymous SNV 0.912 0 24 hm5C_associated_SNPs_73956 0 0 1 EIF3H POSTAR2 ENCODE chr19:39913503-39913553
64251 chr15 91496243 91496243 1 + G A rs140310728 91496240 + 91496220 91496260 41 GAGATGATCCGCCGGGCAGCCACGGAGTGCATGTGTAACTT GAGATGATCCGCCGGGCAGCCACAGAGTGCATGTGTAACTT < 41bp 0.748930499201917 0.517304355184075 0.35946837 0.36416173 prediction 0.463252288035682 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91496240 chr15:91496243 synonymous SNV . 0 24 hm5C_associated_SNPs_73957 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:91496240-91496260
64251 chr18 657610 657610 1 + G C rs367994610 657609 + 657589 657629 41 GGAAGAGGCGGAGCGCGGGACGGCCGCGGGAAAAGGCGCGC GGAAGAGGCGGAGCGCGGGACCGCCGCGGGAAAAGGCGCGC < 41bp 0.849160923640397 0.617542238326758 0.73787904 0.82166404 prediction 0.463237370627278 Functional Loss - TYMS ENSG00000176890 UTR5 Human protein_coding chr18:657609 chr18:657610 . . 0 22 hm5C_associated_SNPs_73961 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr18:657600-657620
64251 chr15 41773278 41773278 1 + A T rs575127630 41773274 + 41773254 41773294 41 GCAGCACCAGGCGGTCTCCTCTACAGACTGCCTTGGCCCAC GCAGCACCAGGCGGTCTCCTCTACTGACTGCCTTGGCCCAC < 41bp 0.885474586409427 0.653864584163228 0.87118006 0.17556512 prediction 0.463220004492398 Functional Loss - RTF1 ENSG00000137815 UTR3 Human protein_coding chr15:41773274 chr15:41773278 . . 0 25 hm5C_associated_SNPs_73964 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:41773274-41773317
64251 chr13 115091399 115091399 1 + T C rs9525332 115091398 + 115091378 115091418 41 AGAAAAAGAAGCTTTTATCTCTGAAGAGGAGATTGCAAAAT AGAAAAAGAAGCTTTTATCTCCGAAGAGGAGATTGCAAAAT < 41bp 0.731609954685035 0.495615155260989 0.099876285 0.37668586 prediction 0.46321990937007 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115091398 chr13:115091399 synonymous SNV . 0 22 hm5C_associated_SNPs_73965 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:115091359-115091488
64251 chrX 48760292 48760292 1 + G T SARC 48760290 + 48760270 48760310 41 CTGGGCCCCTCTTCCAGCAGCGGCCGTATCCATCCCCAGGG CTGGGCCCCTCTTCCAGCAGCGTCCGTATCCATCCCCAGGG < 41bp 0.731608519910862 0.410225982842945 0.7248899 0.507799 prediction 0.463217039821724 Functional Loss - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48760290 chrX:48760292 synonymous SNV . 0 23 hm5C_associated_SNPs_73966 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:48760259-48760292
64251 chr12 6499481 6499481 1 + C T UCEC 6499479 + 6499459 6499499 41 CCAGGGAGCCGCAGTTGGAACCCGGGGAGCAGAGCCAGGTG CCAGGGAGCCGCAGTTGGAACCTGGGGAGCAGAGCCAGGTG < 41bp 0.789623674120332 0.558020256145403 0.87230223 0.6863356 prediction 0.463206835949858 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6499479 chr12:6499481 synonymous SNV . 0 23 hm5C_associated_SNPs_73969 0 0 1 GRWD1 POSTAR2 ENCODE chr12:6499437-6499498
64251 chr1 41304094 41304094 1 + G T OV 41304091 + 41304071 41304111 41 TGCAAGTGCCGCTGTTCGACCCCGACATCACCTCCGACTAC TGCAAGTGCCGCTGTTCGACCCCTACATCACCTCCGACTAC < 41bp 0.731602012869614 0.342798198121095 0.15198198 0.40700084 prediction 0.463204025739228 Functional Loss - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41304091 chr1:41304094 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73970 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:41304069-41304106
64251 chr22 46708156 46708156 1 + G A rs201701933 46708153 + 46708133 46708173 41 TGCTGTCAATGTGCCGGCCGCCGGAAGCCACTTGGGCCAGG TGCTGTCAATGTGCCGGCCGCCGAAAGCCACTTGGGCCAGG < 41bp 0.731600292891426 0.478241745908279 0.8820302 0.53837305 prediction 0.463200585782852 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46708153 chr22:46708156 nonsynonymous SNV 0.010 1 24 hm5C_associated_SNPs_73971 0 0 3 BUD13 POSTAR2 ENCODE chr22:46708126-46708169
64251 chrX 56591133 56591133 1 + A C LUAD 56591132 + 56591112 56591152 41 GGCGCATGTACACTGACATTCAAGAGCCGATGCTGAATGCC GGCGCATGTACACTGACATTCCAGAGCCGATGCTGAATGCC < 41bp 0.79112216740732 0.55952572479104 0.32030457 0.30058348 prediction 0.463192885232559 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591132 chrX:56591133 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_73972 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chrX:56591105-56591135
64251 chr16 1877337 1877337 1 + G T PAAD 1877335 + 1877315 1877355 41 GACCACGTCAGGGAGATGCGCAGCGCGGTGTTGAGCGAGCC GACCACGTCAGGGAGATGCGCATCGCGGTGTTGAGCGAGCC < 41bp 0.73159521199729 0.368330644419675 0.5354318 0.23819363 prediction 0.46319042399458 Functional Loss - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877335 chr16:1877337 nonsynonymous SNV 0.897 2 23 hm5C_associated_SNPs_73976 0 0 1 RPS3 POSTAR2 ENCODE chr16:1877298-1877369
64251 chr17 7559490 7559490 1 + G A rs181025749 7559487 + 7559467 7559507 41 AGTTAGGAGCCTTTCTAGTTCTGGTTTAGCTGTGAGAGCTA AGTTAGGAGCCTTTCTAGTTCTGATTTAGCTGTGAGAGCTA < 41bp 0.785011619071864 0.553420204532251 0.1888425 0.1653814 prediction 0.463182829079225 Functional Loss - ATP1B2 ENSG00000129244 UTR3 Human protein_coding chr17:7559487 chr17:7559490 . . 0 24 hm5C_associated_SNPs_73977 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7559469-7559523
64251 chr19 11030602 11030602 1 + G A OV 11030599 + 11030579 11030619 41 TGCTGCATTCAGGGCTGGTCCACGGCCTGGCTTTCTGGTTT TGCTGCATTCAGGGCTGGTCCACAGCCTGGCTTTCTGGTTT < 41bp 0.777371665415703 0.545788483341531 0.09563416 0.01664123 prediction 0.463166364148345 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11030599 chr19:11030602 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_73982 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11030592-11030615
64251 chr4 1219224 1219224 1 - C T CESC 1219227 - 1219207 1219247 41 CTGCGGGAGGGCACACGAGTCCAGAGCGTCGAGCAGATCCG CTGCGGGAGGGCACACGAGTCCAAAGCGTCGAGCAGATCCG < 41bp 0.757874254806916 0.526295283036456 0.32976013 0.15584329 prediction 0.46315794354092 Functional Loss - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1219227 chr4:1219224 synonymous SNV . 0 24 hm5C_associated_SNPs_73984 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:1219181-1219226
64251 chr1 207241029 207241029 1 + G A COAD 207241026 + 207241006 207241046 41 GGGGAAGATTGGGGGTGACTCTGGCCTCTCGGTGCGGGGAA GGGGAAGATTGGGGGTGACTCTGACCTCTCGGTGCGGGGAA < 41bp 0.792223760927239 0.560645176603905 0.898224 0.70831984 prediction 0.463157168646667 Functional Loss - PFKFB2 ENSG00000123836 CDS Human protein_coding chr1:207241026 chr1:207241029 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_73985 0 0 1 DDX24 POSTAR2 ENCODE chr1:207240985-207241053
64251 chr16 87723644 87723644 1 + G T UCEC 87723641 + 87723621 87723661 41 TCGTGGATGACTTCCGCACCCGAGGTTCGGGCCGCAAGCAG TCGTGGATGACTTCCGCACCCGATGTTCGGGCCGCAAGCAG < 41bp 0.925732073376259 0.6941552951385 0.878141 0.27776355 prediction 0.463153556475518 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87723641 chr16:87723644 nonsynonymous SNV 0.005 1 24 hm5C_associated_SNPs_73989 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:87723622-87723682
64251 chr17 4635160 4635160 1 + G A STAD 4635157 + 4635137 4635177 41 CCTTCACCGCTTCAGTGCAACACGTGGAGGCGGAGCTGTCA CCTTCACCGCTTCAGTGCAACACATGGAGGCGGAGCTGTCA < 41bp 0.739018851598743 0.507442800842803 0.0992074 0.15871862 prediction 0.463152101511881 Functional Loss - MED11 ENSG00000161920 CDS Human protein_coding chr17:4635157 chr17:4635160 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_73990 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:4635151-4635165
64251 chr11 4141133 4141133 1 + G A GBM 4141130 + 4141110 4141150 41 GAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTG GAGAGTATATAACAACACAGCTCAATATGTGGATCAAGGTG < 41bp 0.741779002349252 0.510212743717709 0.0946365 0.022895128 prediction 0.463132517263087 Functional Loss - RRM1 ENSG00000167325 CDS Human protein_coding chr11:4141130 chr11:4141133 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_73995 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:4141090-4141141
64251 chr3 38454461 38454461 1 + T C STAD 38454460 + 38454440 38454480 41 TTCTCCCCCAGTATGCCAAACTCGAGCAGAGAATCTTGTCT TTCTCCCCCAGTATGCCAAACCCGAGCAGAGAATCTTGTCT < 41bp 0.731554960872783 0.479318186202708 0.46386844 0.3222369 prediction 0.463109921745567 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38454460 chr3:38454461 nonsynonymous SNV 0.069 3 22 hm5C_associated_SNPs_74001 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:38454452-38454502
64251 chr12 56630789 56630789 1 + G A COAD 56630786 + 56630766 56630806 41 TCTTCTGCCATGAGCTGCCCCACGAACTGGGTAGGAATGGC TCTTCTGCCATGAGCTGCCCCACAAACTGGGTAGGAATGGC < 41bp 0.743616586481435 0.512076020287859 0.05725801 0.024820656 prediction 0.463081132387152 Functional Loss - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56630786 chr12:56630789 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_74008 0 0 1 GRWD1 POSTAR2 ENCODE chr12:56630746-56630789
64251 chr2 74425784 74425784 1 + C T BRCA 74425782 + 74425762 74425802 41 GCGGTCTATGGCTGCGACTTCTCTAATGTCTGCTTTGGCTG GCGGTCTATGGCTGCGACTTCTTTAATGTCTGCTTTGGCTG < 41bp 0.75226174162272 0.520721888630416 0.93082523 0.1759451 prediction 0.463079705984609 Functional Loss - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74425782 chr2:74425784 synonymous SNV . 0 23 hm5C_associated_SNPs_74010 0 0 51 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74425713-74425863
64251 chr8 75276279 75276279 1 + G A BRCA 75276276 + 75276256 75276296 41 TCACCCTGGCAGACGTCTCACTCGCTGTCACATTGCATCGA TCACCCTGGCAGACGTCTCACTCACTGTCACATTGCATCGA < 41bp 0.744000527834774 0.512463214960347 0.031926364 0.017371804 prediction 0.463074625748854 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75276276 chr8:75276279 nonsynonymous SNV 0.798 3 24 hm5C_associated_SNPs_74013 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:75276249-75276279
64251 chr1 167663537 167663537 1 + A T LUSC 167663533 + 167663513 167663553 41 GGCAGTCATCTGCCCTGTTACAACAAGGTAAATTCTAGCTC GGCAGTCATCTGCCCTGTTACAACTAGGTAAATTCTAGCTC < 41bp 0.731536550065215 0.392428929058672 0.36583027 0.13779604 prediction 0.46307310013043 Functional Loss - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167663533 chr1:167663537 stopgain 0.960 1 25 hm5C_associated_SNPs_74015 0 0 2 YBX3 POSTAR2 ENCODE chr1:167663512-167663540
64251 chr9 77745523 77745523 1 + C T LUAD 77745520 + 77745500 77745540 41 ACCAATTGGTGGAAAGGCACCTCCAAAGGCAGGACTGGACT ACCAATTGGTGGAAAGGCACCTCTAAAGGCAGGACTGGACT < 41bp 0.731533445254784 0.495817919800542 0.9647661 0.9375599 prediction 0.463066890509567 Functional Loss - OSTF1 ENSG00000134996 CDS Human protein_coding chr9:77745520 chr9:77745523 synonymous SNV . 0 24 hm5C_associated_SNPs_74017 0 0 3 RBM15 POSTAR2 ENCODE chr9:77745488-77745531
64251 chr1 151238001 151238001 1 + T C LAML 151238000 + 151237980 151238020 41 CATCAGTTCTCCGATTTTGGCTGGTGAAGGTGGTGCCATGC CATCAGTTCTCCGATTTTGGCCGGTGAAGGTGGTGCCATGC < 41bp 0.767758379978774 0.536227402054699 0.5126139 0.50837415 prediction 0.46306195584815 Functional Loss - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151238000 chr1:151238001 synonymous SNV . 0 22 hm5C_associated_SNPs_74020 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151237948-151238044
64251 chr3 49059908 49059908 1 + G A BLCA 49059905 + 49059885 49059925 41 AGCTACAACAGCCGCGGCTTCATGATAAACGGAAACCGCGT AGCTACAACAGCCGCGGCTTCATAATAAACGGAAACCGCGT < 41bp 0.755060382441081 0.52353350876628 0.11877164 0.08926788 prediction 0.463053747349602 Functional Loss - NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49059905 chr3:49059908 nonsynonymous SNV 0.814 0 24 hm5C_associated_SNPs_74024 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:49059884-49059908
64251 chr19 49686349 49686349 1 + G A STAD 49686346 + 49686326 49686366 41 TGCTGGCAGATGTATCTGCTCTCGGACAAGGCCACCTCGCC TGCTGGCAGATGTATCTGCTCTCAGACAAGGCCACCTCGCC < 41bp 0.772454717782017 0.540937642538914 0.2070424 0.077579916 prediction 0.463034150486207 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49686346 chr19:49686349 synonymous SNV . 0 24 hm5C_associated_SNPs_74030 0 0 1 RPS3 POSTAR2 ENCODE chr19:49686334-49686357
64251 chr7 150094853 150094853 1 + G A rs7780011 150094850 + 150094830 150094870 41 CGGTCCCCGGGGGCCCGGGACACGCTGTGGGGCCGGGGACA CGGTCCCCGGGGGCCCGGGACACACTGTGGGGCCGGGGACA < 41bp 0.783355675744326 0.55184189705273 0.59583074 0.54787475 prediction 0.463027557383192 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150094850 chr7:150094853 synonymous SNV . 0 24 hm5C_associated_SNPs_74032 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr7:150094852-150094853
64251 chr1 2493144 2493144 1 + G T LUAD 2493141 + 2493121 2493161 41 GCTGGTGACGAAGGCCGGAGCTGGGACCAGCAGCTCCCACT GCTGGTGACGAAGGCCGGAGCTGTGACCAGCAGCTCCCACT < 41bp 0.925194843625468 0.693683439330916 0.8959414 0.77046055 prediction 0.463022808589104 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2493141 chr1:2493144 nonsynonymous SNV 0.060 3 24 hm5C_associated_SNPs_74036 0 0 1 PPIG POSTAR2 ENCODE chr1:2493115-2493161
64251 chrX 30236867 30236867 1 + G A UCEC 30236864 + 30236844 30236884 41 TGCTTCAAGCTCTCCTGCTGCTGGCATTCCCCAGGAGCCTC TGCTTCAAGCTCTCCTGCTGCTGACATTCCCCAGGAGCCTC < 41bp 0.77861742442546 0.547107737735357 0.51009834 0.23285842 prediction 0.463019373380206 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236864 chrX:30236867 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_74039 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:30236828-30236897
64251 chr18 47920414 47920414 1 + A T rs74730636 47920410 + 47920390 47920430 41 TGTGCCAGGAAGGTGACGCACTCCAGCTTTATGAAGTCAGC TGTGCCAGGAAGGTGACGCACTCCTGCTTTATGAAGTCAGC < 41bp 0.83469427428798 0.603186540708828 0.76115954 0.05049157 prediction 0.463015467158304 Functional Loss - SKA1 ENSG00000154839 UTR3 Human protein_coding chr18:47920410 chr18:47920414 . . 0 25 hm5C_associated_SNPs_74042 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chr18:47920344-47920458
64251 chr21 45107682 45107682 1 + G A COAD 45107679 + 45107659 45107699 41 GCACAATAAAAGGAAACGGCCACGGAAGAAGAGCCCGAGGG GCACAATAAAAGGAAACGGCCACAGAAGAAGAGCCCGAGGG < 41bp 0.731499364518217 0.483502905385049 0.112226486 0.072156906 prediction 0.462998729036434 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107679 chr21:45107682 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_74050 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45107680-45107735
64251 chr21 45107681 45107681 1 + C T STAD 45107679 + 45107659 45107699 41 GCACAATAAAAGGAAACGGCCACGGAAGAAGAGCCCGAGGG GCACAATAAAAGGAAACGGCCATGGAAGAAGAGCCCGAGGG < 41bp 0.731499364518217 0.48017384908033 0.112226486 0.16108072 prediction 0.462998729036434 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107679 chr21:45107681 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_74051 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45107680-45107735
64251 chr15 29406180 29406180 1 + C T UCEC 29406178 + 29406158 29406198 41 AGAGCGTGGTGGCCACAGCCCACGAGAAGATAGTCCAAGCT AGAGCGTGGTGGCCACAGCCCATGAGAAGATAGTCCAAGCT < 41bp 0.829190346646138 0.597696009374283 0.30817717 0.09588686 prediction 0.462988674543708 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29406178 chr15:29406180 synonymous SNV . 0 23 hm5C_associated_SNPs_74055 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:29406147-29406188
64251 chr17 25639344 25639344 1 + G T SKCM 25639342 + 25639322 25639362 41 TGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCC TGATGCCCACCCAAGAAGTTCATGAGCTGCCGATTCCTTCC < 41bp 0.88921303682879 0.657719480841932 0.9208396 0.056931853 prediction 0.462987111973717 Functional Loss - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25639342 chr17:25639344 nonsynonymous SNV 0.785 1 23 hm5C_associated_SNPs_74056 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:25639333-25639370
64251 chr1 228362690 228362690 1 + C T COAD 228362688 + 228362668 228362708 41 CCCTGGTGCCCGGGGGCCGGCTCGGGGACTTGTGGGATTAT CCCTGGTGCCCGGGGGCCGGCTTGGGGACTTGTGGGATTAT < 41bp 0.731486217305509 0.47577345090277 0.79763234 0.8952626 prediction 0.462972434611018 Functional Loss - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362688 chr1:228362690 synonymous SNV . 0 23 hm5C_associated_SNPs_74063 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:228362687-228362730
64251 chr2 3750128 3750128 1 + C T BLCA 3750126 + 3750106 3750146 41 GAGAAGCCCATGTTGAAGTTCTCGGTGAGCTTCAAAGCAAA GAGAAGCCCATGTTGAAGTTCTTGGTGAGCTTCAAAGCAAA < 41bp 0.814558863137002 0.583074033833793 0.21430847 0.2533667 prediction 0.462969658606419 Functional Loss - ALLC ENSG00000151360 CDS Human protein_coding chr2:3750126 chr2:3750128 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_74065 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:3750121-3750155
64251 chr19 47259316 47259316 1 + C T STAD 47259314 + 47259294 47259334 41 GAGATGCTGTGGTGCTCCTGCGCGCCCGCGACCTCTTCAAC GAGATGCTGTGGTGCTCCTGCGTGCCCGCGACCTCTTCAAC < 41bp 0.731481541775351 0.483715635204622 0.4155487 0.46469623 prediction 0.462963083550702 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259314 chr19:47259316 synonymous SNV . 0 23 hm5C_associated_SNPs_74066 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:47259296-47259320
64251 chr1 1269330 1269330 1 + G T rs565867201 1269328 + 1269308 1269348 41 TGCCTGCGGGGGCCCTGGGCCTGGCTGGTGGTGCTGCTGGC TGCCTGCGGGGGCCCTGGGCCTTGCTGGTGGTGCTGCTGGC < 41bp 0.731480693998928 0.386580950587649 0.44518405 0.2915225 prediction 0.462961387997856 Functional Loss - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269328 chr1:1269330 nonsynonymous SNV 0.548 5 23 hm5C_associated_SNPs_74067 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:1269301-1269334
64251 chr12 132281820 132281820 1 + C T STAD 132281818 + 132281798 132281838 41 ACCCAGCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGG ACCCAGCAAGCAGGCAGCGCCCTGGCCCGCGGCCCCCGCGG < 41bp 0.742061194105033 0.510590524322219 0.6317462 0.4053654 prediction 0.46294133956563 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281818 chr12:132281820 nonsynonymous SNV 0.008 2 23 hm5C_associated_SNPs_74071 0 0 3 PPIG POSTAR2 ENCODE chr12:132281793-132281830
64251 chr19 34859589 34859589 1 + G A CESC 34859586 + 34859566 34859606 41 GAGGTCAACAAGGTTCTGGACAAGATGAAGTCTTTCTGCCA GAGGTCAACAAGGTTCTGGACAAAATGAAGTCTTTCTGCCA < 41bp 0.758518160829264 0.527048631427951 0.43038088 0.41949457 prediction 0.462939058802626 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34859586 chr19:34859589 synonymous SNV . 0 24 hm5C_associated_SNPs_74072 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34859520-34859605
64251 chr14 70235601 70235601 1 + G A READ 70235598 + 70235578 70235618 41 CCGTTTTAGTAGTCGCAGACCTCGAAATGATAGACGGTATG CCGTTTTAGTAGTCGCAGACCTCAAAATGATAGACGGTATG < 41bp 0.738578504732206 0.507109251141124 0.67300355 0.12330294 prediction 0.462938507182163 Functional Loss - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70235598 chr14:70235601 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_74073 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:70235503-70235643
64251 chr1 154227704 154227704 1 + A T GBM 154227700 + 154227680 154227720 41 CCCTCTCAATGAAACGGTATCTGCAGCTTCCTTACTGACGA CCCTCTCAATGAAACGGTATCTGCTGCTTCCTTACTGACGA < 41bp 0.731464847408871 0.398363342946313 0.05227211 0.026793003 prediction 0.462929694817742 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154227700 chr1:154227704 synonymous SNV . 0 25 hm5C_associated_SNPs_74075 0 0 21 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:154227647-154227751
64251 chr1 1563724 1563724 1 + T C STAD 1563723 + 1563703 1563743 41 AGGAGGACGGCTTCACGGCGCTGCATCTGGCTGCCCTCAAC AGGAGGACGGCTTCACGGCGCCGCATCTGGCTGCCCTCAAC < 41bp 0.759807874658704 0.528345636165112 0.10833117 0.117204845 prediction 0.462924476987184 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1563723 chr1:1563724 nonsynonymous SNV 0.097 4 22 hm5C_associated_SNPs_74077 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:1563715-1563735
64251 chr16 5128824 5128824 1 + G T LUAD 5128822 + 5128802 5128842 41 AGCGGGATGCTGGGAGCGGGCTGGTGACGCGTCTCCGTGAG AGCGGGATGCTGGGAGCGGGCTTGTGACGCGTCTCCGTGAG < 41bp 0.906284526817855 0.674827721705519 0.41527998 0.2665615 prediction 0.462913610224673 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128822 chr16:5128824 synonymous SNV . 0 23 hm5C_associated_SNPs_74082 0 0 7 DDX3X POSTAR2 ENCODE chr16:5128815-5128855
64251 chr19 47878770 47878770 1 + G T ACC 47878768 + 47878748 47878788 41 TGGCTGGGGCCCAGGCCGCGCAGGTAGGGGACAGCTACAGT TGGCTGGGGCCCAGGCCGCGCATGTAGGGGACAGCTACAGT < 41bp 0.731454087543381 0.371847467933464 0.40463853 0.35552564 prediction 0.462908175086761 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47878768 chr19:47878770 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_74083 0 0 4 BUD13 POSTAR2 ENCODE chr19:47878728-47878776
64251 chr18 32827018 32827018 1 + G C rs116351575 32827014 + 32826994 32827034 41 GAAGGATGAGGAGGAGTTAGCCAAGGTGGTACTCTAGGGAA GAAGGATGAGGAGGAGTTAGCCAACGTGGTACTCTAGGGAA < 41bp 0.731450724483884 0.482099034723127 0.9009403 0.4565266 prediction 0.462901448967768 Functional Loss - ZNF397 ENSG00000186812 UTR3 Human protein_coding chr18:32827014 chr18:32827018 . . 0 25 hm5C_associated_SNPs_74084 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:32826945-32827023
64251 chr12 56143619 56143619 1 + T C COAD 56143618 + 56143598 56143638 41 AATGACAAGCAGCAGATTATCTACGGCAAGATCCCTGGCAT AATGACAAGCAGCAGATTATCCACGGCAAGATCCCTGGCAT < 41bp 0.770051792721828 0.538603715670511 0.1526441 0.3050851 prediction 0.462896154102634 Functional Loss - GDF11 ENSG00000135414 CDS Human protein_coding chr12:56143618 chr12:56143619 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_74086 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:56143601-56143624
64251 chr1 38158641 38158641 1 + C T HNSC 38158639 + 38158619 38158659 41 TCCTCAAGGAGGTGGATAACCTCTACAACATCGAGATCCTG TCCTCAAGGAGGTGGATAACCTTTACAACATCGAGATCCTG < 41bp 0.73144448563315 0.438890991410445 0.8501435 0.117578566 prediction 0.462888971266299 Functional Loss - CDCA8 ENSG00000134690 CDS Human protein_coding chr1:38158639 chr1:38158641 synonymous SNV . 0 23 hm5C_associated_SNPs_74089 0 0 1 ZNF622 POSTAR2 ENCODE chr1:38158640-38158683
64251 chr17 37809851 37809851 1 + G T STAD 37809848 + 37809828 37809868 41 GCCTGCCTGCCGTGGCCTCCCTGGGCTCCTCACTGTCCCAC GCCTGCCTGCCGTGGCCTCCCTGTGCTCCTCACTGTCCCAC < 41bp 0.923302037223638 0.691858345935246 0.84679294 0.14546326 prediction 0.462887382576785 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37809848 chr17:37809851 nonsynonymous SNV 0.491 3 24 hm5C_associated_SNPs_74090 0 0 3 DDX3X POSTAR2 ENCODE chr17:37809812-37809891
64251 chr6 148865804 148865804 1 + G A UCEC 148865801 + 148865781 148865821 41 CCCTGGCTCTCAGAGCTCCCCGAGAACACAAGCCTCCAGGA CCCTGGCTCTCAGAGCTCCCCGAAAACACAAGCCTCCAGGA < 41bp 0.776446618840706 0.545006328604882 0.8484262 0.2969936 prediction 0.462880580471647 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148865801 chr6:148865804 synonymous SNV . 0 24 hm5C_associated_SNPs_74094 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:148865771-148865834
64251 chr7 55229255 55229255 1 + G A rs2227983 55229252 + 55229232 55229272 41 GGGCTGCTGGGGCCCGGAGCCCAGGGACTGCGTCTCTTGCC GGGCTGCTGGGGCCCGGAGCCCAAGGACTGCGTCTCTTGCC < 41bp 0.74841351569392 0.516975456282507 0.9018718 0.45080572 prediction 0.462876118822828 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55229252 chr7:55229255 nonsynonymous SNV 0.247 0 24 hm5C_associated_SNPs_74095 2 0 1 SND1 POSTAR2 ENCODE chr7:55229185-55229271
64251 chr10 23408343 23408343 1 + C T HNSC 23408341 + 23408321 23408361 41 ATCCTGAGACGTCTGGATACCTCGTTAGGATCAGCTCGCAC ATCCTGAGACGTCTGGATACCTTGTTAGGATCAGCTCGCAC < 41bp 0.827598183004282 0.596160317530354 0.06275129 0.084079444 prediction 0.462875730947856 Functional Loss - MSRB2 ENSG00000148450 CDS Human protein_coding chr10:23408341 chr10:23408343 nonsynonymous SNV 0.073 4 23 hm5C_associated_SNPs_74096 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:23408308-23408349
64251 chr3 127358234 127358234 1 + G T LUSC 127358232 + 127358212 127358252 41 TGAGACCATGGGCCTGGGAGCTGGGCTGGGAGCCCCTGGCT TGAGACCATGGGCCTGGGAGCTTGGCTGGGAGCCCCTGGCT < 41bp 0.903048869866652 0.671617293496495 0.86415124 0.4519774 prediction 0.462863152740314 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127358232 chr3:127358234 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_74101 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:127358199-127358237
64251 chr9 140109063 140109063 1 + C T BRCA 140109061 + 140109041 140109081 41 GTGCTGATTCAGCCCTCCAACTCGGCTGCCCATGTCCAGCG GTGCTGATTCAGCCCTCCAACTTGGCTGCCCATGTCCAGCG < 41bp 0.825047238674215 0.593622308634538 0.6111814 0.3818868 prediction 0.462849860079353 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140109061 chr9:140109063 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_74104 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:140109024-140109074
64251 chr2 200820839 200820839 1 + G A BLCA 200820836 + 200820816 200820856 41 GAGGAGAAGCCCCAGCAGCACCAGAAAACCAAGATGATCGT GAGGAGAAGCCCCAGCAGCACCAAAAAACCAAGATGATCGT < 41bp 0.764530476481122 0.533116175544583 0.38378605 0.13162455 prediction 0.462828601873076 Functional Loss - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820836 chr2:200820839 synonymous SNV . 0 24 hm5C_associated_SNPs_74110 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:200820839-200820840
64251 chr22 20920998 20920998 1 + A C UCEC 20920997 + 20920977 20921017 41 CCCAGCAGCCTCCAGTTGCTCAGAACCAACCATCACAACTC CCCAGCAGCCTCCAGTTGCTCCGAACCAACCATCACAACTC < 41bp 0.788138684256133 0.556725382011934 0.23058131 0.015467972 prediction 0.462826604488398 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20920997 chr22:20920998 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_74112 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr22:20920980-20921000
64251 chr11 65631144 65631144 1 + G A COAD 65631141 + 65631121 65631161 41 CCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGG CCCACACGGTGCGCAAGCTGCACATTGGAGATTTTGTGTGG < 41bp 0.767670110422134 0.536267180577511 0.22882333 0.16110545 prediction 0.462805859689244 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631141 chr11:65631144 nonsynonymous SNV 0.958 1 24 hm5C_associated_SNPs_74115 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65631125-65631154
64251 chr12 27470306 27470306 1 + C T SKCM 27470303 + 27470283 27470323 41 TGGGACACCAGATTACATTGCTCCAGAAGTATTCATGCAGA TGGGACACCAGATTACATTGCTCTAGAAGTATTCATGCAGA < 41bp 0.731398746350095 0.496574130304496 0.29949522 0.22151026 prediction 0.46279749270019 Functional Loss - STK38L ENSG00000211455 CDS Human protein_coding chr12:27470303 chr12:27470306 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_74116 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:27470282-27470309
64251 chr18 67992718 67992718 1 + G T LUAD 67992715 + 67992695 67992735 41 AGGATGAGAGTCAGGTAGACCAGGACCTAGTTGTCGCCCCA AGGATGAGAGTCAGGTAGACCAGTACCTAGTTGTCGCCCCA < 41bp 0.922342242168601 0.690943893380974 0.8932934 0.20674714 prediction 0.462796697575254 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992715 chr18:67992718 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_74117 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:67992709-67992738
64251 chr14 100996221 100996221 1 + C T SKCM 100996219 + 100996199 100996239 41 GACTTGCTGGTGACGGGCAGCGCCGATGGCCGGGTCCTGAT GACTTGCTGGTGACGGGCAGCGTCGATGGCCGGGTCCTGAT < 41bp 0.807060807144668 0.575673954380354 0.3709733 0.42894855 prediction 0.462773705528628 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996219 chr14:100996221 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_74122 0 0 1 PUM2 POSTAR2 ENCODE chr14:100996201-100996250
64251 chr9 108467982 108467982 1 + C T SKCM 108467980 + 108467960 108468000 41 CTGTCTACTGCTTGCAGAGCCTCCATTGAAGTTTCTTGCAA CTGTCTACTGCTTGCAGAGCCTTCATTGAAGTTTCTTGCAA < 41bp 0.868954584941255 0.637570161442818 0.9676791 0.5016029 prediction 0.462768846996874 Functional Loss - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108467980 chr9:108467982 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_74124 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:108467951-108468028
64251 chr5 147820773 147820773 1 + C T COAD 147820771 + 147820751 147820791 41 TGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACG TGCAGAGCCCAACAGCTTCGCTTGATACGACTTTGAAGACG < 41bp 0.853490909700417 0.622109769622624 0.17912206 0.066028595 prediction 0.462762280155587 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820771 chr5:147820773 stopgain 0.942 1 23 hm5C_associated_SNPs_74126 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:147820754-147820790
64251 chr9 139566889 139566889 1 + G A rs11558192 139566886 + 139566866 139566906 41 TCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCCCCAGACCC TCCTCTTCCTCCTCCCCTTCCTCAGGAGGCTCCCCAGACCC < 41bp 0.771393342684716 0.540019381179494 0.07698667 0.019584507 prediction 0.462747923010444 Functional Loss - EGFL7 ENSG00000172889 UTR3 Human protein_coding chr9:139566886 chr9:139566889 . . 0 24 hm5C_associated_SNPs_74127 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139566871-139566926
64251 chr4 2695386 2695386 1 + G A STAD 2695383 + 2695363 2695403 41 GCCGCCCCGAGGAATAGCCCCACGGGCTTGGCCCCCCTCCC GCCGCCCCGAGGAATAGCCCCACAGGCTTGGCCCCCCTCCC < 41bp 0.778136084031941 0.546765959545562 0.84655136 0.45411584 prediction 0.462740248972759 Functional Loss - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2695383 chr4:2695386 synonymous SNV . 0 24 hm5C_associated_SNPs_74131 0 0 1 METAP2 POSTAR2 ENCODE chr4:2695380-2695472
64251 chr16 12136874 12136874 1 + T C COAD 12136873 + 12136853 12136893 41 GCGCCTGGCTGCGCTGTGCCCTCAACGAACACTCCCTGGAG GCGCCTGGCTGCGCTGTGCCCCCAACGAACACTCCCTGGAG < 41bp 0.778678102945501 0.547308480854 0.3632779 0.22324258 prediction 0.462739244183002 Functional Loss - SNX29 ENSG00000048471 CDS Human protein_coding chr16:12136873 chr16:12136874 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_74132 0 0 2 GRWD1 POSTAR2 ENCODE chr16:12136751-12136891
64251 chr3 42265625 42265625 1 + G A rs141809893 42265622 + 42265602 42265642 41 GAATTCCGTGGCTGGCACACCACGAGCTGTCACGCGGCACG GAATTCCGTGGCTGGCACACCACAAGCTGTCACGCGGCACG < 41bp 0.731368844762708 0.490305367942235 0.3431946 0.12770438 prediction 0.462737689525417 Functional Loss - TRAK1 ENSG00000182606 UTR3 Human protein_coding chr3:42265622 chr3:42265625 . . 0 24 hm5C_associated_SNPs_74133 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:42265603-42265646
64251 chr2 63832497 63832497 1 + C T UCEC 63832495 + 63832475 63832515 41 CTGCAAAAGCCATCTGTGACCACGTCAGGGACATCTGGTTT CTGCAAAAGCCATCTGTGACCATGTCAGGGACATCTGGTTT < 41bp 0.731360456734886 0.452419685279616 0.21968085 0.2126897 prediction 0.462720913469772 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63832495 chr2:63832497 synonymous SNV . 0 23 hm5C_associated_SNPs_74134 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63832451-63832522
64251 chr20 35827521 35827521 1 + G A UCEC 35827518 + 35827498 35827538 41 AGTGAGGACTCATCTGTTACCCAGATCTACCATGCAGTTGC AGTGAGGACTCATCTGTTACCCAAATCTACCATGCAGTTGC < 41bp 0.756122122971195 0.524764768888038 0.71925646 0.45275053 prediction 0.462714708166313 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35827518 chr20:35827521 synonymous SNV . 0 24 hm5C_associated_SNPs_74136 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:35827520-35827540
64251 chr3 40571807 40571807 1 + G A rs200611775 40571804 + 40571784 40571824 41 AGATTCTGAGAGGCATCAGTCAAGGTGAGTATGAGAATCCA AGATTCTGAGAGGCATCAGTCAAAGTGAGTATGAGAATCCA < 41bp 0.731347082397837 0.499402394104222 0.90928733 0.8979702 prediction 0.462694164795673 Functional Loss - ZNF621 ENSG00000172888 CDS Human protein_coding chr3:40571804 chr3:40571807 nonsynonymous SNV 0.077 1 24 hm5C_associated_SNPs_74141 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:40571781-40571819
64251 chr11 65119684 65119684 1 + G C rs187984335 65119680 + 65119660 65119700 41 GCAAGCTGAGGCCACGTCCACAAGGAGCTTTTCATGCCCCT GCAAGCTGAGGCCACGTCCACAAGCAGCTTTTCATGCCCCT < 41bp 0.855105661473432 0.623765165555571 0.8930799 0.53395855 prediction 0.462680991835723 Functional Loss - DPF2 ENSG00000133884 UTR3 Human protein_coding chr11:65119680 chr11:65119684 . . 0 25 hm5C_associated_SNPs_74149 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65119672-65119706
64251 chr19 50185184 50185184 1 + G T SARC 50185181 + 50185161 50185201 41 CCCTAGGAGATGCTGAAGGACGAGGTGCGCACCCTCACTTA CCCTAGGAGATGCTGAAGGACGATGTGCGCACCCTCACTTA < 41bp 0.931528024182719 0.70018878204046 0.59749776 0.07021561 prediction 0.462678484284518 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185181 chr19:50185184 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_74152 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:50185160-50185200
64251 chr7 50468064 50468064 1 + C T UCEC 50468062 + 50468042 50468082 41 TGTCGCTCAAGGAGGAGCACCGCGCCTACGACCTGCTGCGC TGTCGCTCAAGGAGGAGCACCGTGCCTACGACCTGCTGCGC < 41bp 0.731780107772433 0.500441825454306 0.46320292 0.5041216 prediction 0.462676564636252 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50468062 chr7:50468064 synonymous SNV . 0 23 hm5C_associated_SNPs_74153 0 0 3 FMR1 POSTAR2 ENCODE chr7:50468044-50468128
64251 chr1 2235825 2235825 1 + C T TGCT 2235823 + 2235803 2235843 41 CCGGGTGCGCGTGCCCTGCCCTCGGCCGTCCCTGATGCTGC CCGGGTGCGCGTGCCCTGCCCTTGGCCGTCCCTGATGCTGC < 41bp 0.795939321992433 0.564612926957247 0.19261497 0.184939 prediction 0.462652790070371 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2235823 chr1:2235825 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_74157 1 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:2235791-2235836
64251 chr19 47258797 47258797 1 + G T SARC 47258795 + 47258775 47258815 41 ATGTCTCGTGGCTGCAGCACCAGCCTAGGAATTCCCGGGCC ATGTCTCGTGGCTGCAGCACCATCCTAGGAATTCCCGGGCC < 41bp 0.731314737352382 0.385396079906592 0.23755875 0.14107016 prediction 0.462629474704763 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258795 chr19:47258797 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_74164 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:47258774-47258798
64251 chr2 96993757 96993757 1 + C T rs2279105 96993755 + 96993735 96993775 41 CTCTTGCTACGGCTGCCCCTCACGGACTGGGCCCACAACAT CTCTTGCTACGGCTGCCCCTCATGGACTGGGCCCACAACAT < 41bp 0.731314543004931 0.484446164934579 0.032440215 0.04441321 prediction 0.462629086009862 Functional Loss - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96993755 chr2:96993757 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_74165 0 0 1 IGF2BP1 POSTAR2 ENCODE chr2:96993727-96993820
64251 chr8 145583398 145583398 1 + G T LUAD 145583395 + 145583375 145583415 41 AAGGACGAGCAGGTCCCCATCCGGGTGGTGCAGGTGCTGGG AAGGACGAGCAGGTCCCCATCCGTGTGGTGCAGGTGCTGGG < 41bp 0.824351073809537 0.593040263180533 0.91331977 0.26341447 prediction 0.462621621258008 Functional Loss - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583395 chr8:145583398 synonymous SNV . 0 24 hm5C_associated_SNPs_74168 0 0 2 HNRNPM POSTAR2 ENCODE chr8:145583310-145583433
64251 chr22 39884721 39884721 1 + G A UCEC 39884718 + 39884698 39884738 41 AGCGGGACCTGAACTACATCCGCGGCCTGATCCGCACCGGG AGCGGGACCTGAACTACATCCGCAGCCTGATCCGCACCGGG < 41bp 0.783849396992706 0.55254440118714 0.5501452 0.18079942 prediction 0.462609991611131 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884718 chr22:39884721 nonsynonymous SNV 0.547 0 24 hm5C_associated_SNPs_74170 0 0 1 YBX3 POSTAR2 ENCODE chr22:39884703-39884774
64251 chr20 2844013 2844013 1 + G T SARC 2844011 + 2843991 2844031 41 CTTCCTGAAGTACAGGGCGTCAGCAGGATCCTGGCCCACTG CTTCCTGAAGTACAGGGCGTCATCAGGATCCTGGCCCACTG < 41bp 0.90277515916727 0.671480692519093 0.8184999 0.32623154 prediction 0.462588933296355 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2844011 chr20:2844013 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_74174 0 0 1 DGCR8 POSTAR2 ENCODE chr20:2843996-2844038
64251 chr1 171763663 171763663 1 + T C LUAD 171763662 + 171763642 171763682 41 GGTTAAAAGCATCTTGACTCCTGAAGGTATGGAGAACAAAA GGTTAAAAGCATCTTGACTCCCGAAGGTATGGAGAACAAAA < 41bp 0.731291551651191 0.487114749023327 0.29079008 0.48314744 prediction 0.462583103302383 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171763662 chr1:171763663 synonymous SNV . 0 22 hm5C_associated_SNPs_74177 0 0 2 BUD13 POSTAR2 ENCODE chr1:171763652-171763696
64251 chr9 115336694 115336694 1 + G T LAML 115336691 + 115336671 115336711 41 GGAGACCAGTGAAAGCAAAGCTAGACTGTAACCGGACCAGA GGAGACCAGTGAAAGCAAAGCTATACTGTAACCGGACCAGA < 41bp 0.731283466335935 0.391790739785628 0.21107745 0.12189451 prediction 0.462566932671869 Functional Loss - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115336691 chr9:115336694 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_74184 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:115336678-115336723
64251 chr1 110167930 110167930 1 + C T COAD 110167928 + 110167908 110167948 41 CATCACTGTCTCTGCAGAGGCTCGGGGTGGTCTGGGGGCCC CATCACTGTCTCTGCAGAGGCTTGGGGTGGTCTGGGGGCCC < 41bp 0.772195849150048 0.540918738184302 0.58683175 0.8774148 prediction 0.462554221931492 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110167928 chr1:110167930 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_74187 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:110167927-110167953
64251 chr15 42113917 42113917 1 + G A SKCM 42113914 + 42113894 42113934 41 TTGAAGATGGTATTGTCTACCCGGAGCCGAGTGACAACCCC TTGAAGATGGTATTGTCTACCCGAAGCCGAGTGACAACCCC < 41bp 0.731276584308996 0.497397680684628 0.3825825 0.07997444 prediction 0.462553168617993 Functional Loss - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42113914 chr15:42113917 nonsynonymous SNV 0.654 2 24 hm5C_associated_SNPs_74190 0 0 2 PPIG POSTAR2 ENCODE chr15:42113882-42113943
64251 chr1 27121174 27121174 1 + C T LUSC 27121172 + 27121152 27121192 41 TGTTGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTCT TGTTGGCTTCCTCATGCATTCTTAATGCCAAGGCTTTTTCT < 41bp 0.731270839332073 0.436070924472195 0.3139662 0.188443 prediction 0.462541678664145 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121172 chr1:27121174 stopgain 0.891 1 23 hm5C_associated_SNPs_74194 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:27121174-27121204
64251 chr15 40861878 40861878 1 + G A rs200775057 40861875 + 40861855 40861895 41 AGGGAGCGTGTCGTGCCGCCCCCGAAGAAGCGGCGGACCGG AGGGAGCGTGTCGTGCCGCCCCCAAAGAAGCGGCGGACCGG < 41bp 0.775879007254134 0.544613132126559 0.10697976 0.075490594 prediction 0.46253175025515 Functional Loss - RPUSD2 ENSG00000166133 CDS Human protein_coding chr15:40861875 chr15:40861878 synonymous SNV . 0 24 hm5C_associated_SNPs_74196 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:40861877-40861878
64251 chr17 1678376 1678376 1 + C T BLCA 1678374 + 1678354 1678394 41 CAGTGGGTAACAAAGTTTGACTCCAGAAAGACTTCCCTCGA CAGTGGGTAACAAAGTTTGACTTCAGAAAGACTTCCCTCGA < 41bp 0.73126311887431 0.426471501380525 0.9416444 0.10020873 prediction 0.462526237748621 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1678374 chr17:1678376 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_74197 0 0 5 LIN28B POSTAR2 ENCODE chr17:1678373-1678493
64251 chr17 4800051 4800051 1 + G A LGG 4800048 + 4800028 4800068 41 GTGGAGACGGGCCACCTCGACGGGGTCTTCATGCACAAACG GTGGAGACGGGCCACCTCGACGGAGTCTTCATGCACAAACG < 41bp 0.775168208568181 0.543905242386728 0.3744712 0.08782047 prediction 0.462525932362908 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800048 chr17:4800051 synonymous SNV . 0 24 hm5C_associated_SNPs_74198 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4800022-4800060
64251 chr12 77158109 77158109 1 + G C LUAD 77158105 + 77158085 77158125 41 CTGTGTGCCCCTTCTCCACCCAGAGGTGAGGAACCGTGCTG CTGTGTGCCCCTTCTCCACCCAGACGTGAGGAACCGTGCTG < 41bp 0.839305229870036 0.608049954209294 0.9240352 0.31679857 prediction 0.462510551321484 Functional Loss - ZDHHC17 ENSG00000186908 CDS Human protein_coding chr12:77158105 chr12:77158109 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_74201 0 0 3 GRWD1 POSTAR2 ENCODE chr12:77158040-77158111
64251 chr4 140599771 140599771 1 + G T UCEC 140599769 + 140599749 140599789 41 CCCAGCAGTCACTGGGTCACCAGAGTTTGAGAGAGTATTTC CCCAGCAGTCACTGGGTCACCATAGTTTGAGAGAGTATTTC < 41bp 0.731246281424983 0.378916704857442 0.39410788 0.093216926 prediction 0.462492562849967 Functional Loss - MGST2 ENSG00000085871 CDS Human protein_coding chr4:140599769 chr4:140599771 stopgain 0.935 0 23 hm5C_associated_SNPs_74204 0 0 2 RPS3 POSTAR2 ENCODE chr4:140599726-140599794
64251 chr17 27075534 27075534 1 + C T HNSC 27075532 + 27075512 27075552 41 TACTTCTGTGGCCCCAGAGCCACCAGTACCAGTGCCCAAGG TACTTCTGTGGCCCCAGAGCCATCAGTACCAGTGCCCAAGG < 41bp 0.84796466611979 0.616723898405507 0.2638696 0.15224871 prediction 0.462481535428566 Functional Loss - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075532 chr17:27075534 synonymous SNV . 0 23 hm5C_associated_SNPs_74206 0 0 11 BUD13 POSTAR2 ENCODE chr17:27075507-27075566
64251 chr5 150639418 150639418 1 + G T SKCM 150639416 + 150639396 150639436 41 GCCTGACCCCATCATCGTTCCTGGAAATGTGACCCTCAGTG GCCTGACCCCATCATCGTTCCTTGAAATGTGACCCTCAGTG < 41bp 0.898803774769755 0.66756577670255 0.24900144 0.08856338 prediction 0.462475996134411 Functional Loss - GM2A ENSG00000196743 CDS Human protein_coding chr5:150639416 chr5:150639418 stopgain 0.180 1 23 hm5C_associated_SNPs_74208 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:150639389-150639420
64251 chr3 111697944 111697944 1 + G C LUAD 111697940 + 111697920 111697960 41 GCGCTTGGCAGCTGTGGCGGCCTGGGTACCTTGTCGGAGCT GCGCTTGGCAGCTGTGGCGGCCTGCGTACCTTGTCGGAGCT < 41bp 0.731234048165714 0.445026506286025 0.5662971 0.33819735 prediction 0.462468096331428 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111697940 chr3:111697944 nonsynonymous SNV 0.008 0 25 hm5C_associated_SNPs_74209 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:111697927-111697955
64251 chr19 16192765 16192765 1 + G A STAD 16192762 + 16192742 16192782 41 CCCTCAACCGACGCATCCAGCTCGTTGAGGAGGAGTTGGAC CCCTCAACCGACGCATCCAGCTCATTGAGGAGGAGTTGGAC < 41bp 0.731225559654352 0.48952891428416 0.29914755 0.2886172 prediction 0.462451119308704 Functional Loss - TPM4 ENSG00000167460 CDS Human protein_coding chr19:16192762 chr19:16192765 nonsynonymous SNV 0.843 2 24 hm5C_associated_SNPs_74212 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16192733-16192791
64251 chr20 57597970 57597970 1 + A C rs463312 57597969 + 57597949 57597989 41 ACCGCGGGGCCTCGGCCTTGCAGCTGGAGAGAATCAGCGTG ACCGCGGGGCCTCGGCCTTGCCGCTGGAGAGAATCAGCGTG < 41bp 0.818277782115692 0.587057289562923 0.3562709 0.2605843 prediction 0.462440985105537 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57597969 chr20:57597970 nonsynonymous SNV 0.895 4 22 hm5C_associated_SNPs_74214 0 1 4 BUD13 POSTAR2 ENCODE chr20:57597897-57598034
64251 chr3 193854767 193854767 1 + G A UCEC 193854764 + 193854744 193854784 41 ATGCAGAGCTCGCGGCATTCCAAGCTGGAGAAGGCGGACAT ATGCAGAGCTCGCGGCATTCCAAACTGGAGAAGGCGGACAT < 41bp 0.75713823684382 0.525928415637671 0.46464676 0.31575817 prediction 0.462419642412298 Functional Loss - HES1 ENSG00000114315 CDS Human protein_coding chr3:193854764 chr3:193854767 synonymous SNV . 0 24 hm5C_associated_SNPs_74219 0 0 2 PRPF8 POSTAR2 ENCODE chr3:193854731-193854778
64251 chr1 181018348 181018348 1 + C T COAD 181018346 + 181018326 181018366 41 CCCCATGGATGGCAGAGAACCTCGCGCCTGATCACTGGGAG CCCCATGGATGGCAGAGAACCTTGCGCCTGATCACTGGGAG < 41bp 0.731201336817664 0.457783224736704 0.26479053 0.17202437 prediction 0.462402673635328 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018346 chr1:181018348 synonymous SNV . 0 23 hm5C_associated_SNPs_74222 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr1 181018349 181018349 1 + G T LUAD 181018346 + 181018326 181018366 41 CCCCATGGATGGCAGAGAACCTCGCGCCTGATCACTGGGAG CCCCATGGATGGCAGAGAACCTCTCGCCTGATCACTGGGAG < 41bp 0.731201336817664 0.33303322805433 0.26479053 0.059076488 prediction 0.462402673635328 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018346 chr1:181018349 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_74223 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr15 89169451 89169451 1 + G A rs142698453 89169448 + 89169428 89169468 41 TGAGCTGACTGGAATGGTACCCCGGGAGGCCCCTGAGTCTG TGAGCTGACTGGAATGGTACCCCAGGAGGCCCCTGAGTCTG < 41bp 0.731201027194718 0.478977917492119 0.22402242 0.08933571 prediction 0.462402054389437 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169448 chr15:89169451 nonsynonymous SNV 0.032 0 24 hm5C_associated_SNPs_74224 0 0 15 EIF3G POSTAR2 GSE65004,GSM1585673 chr15:89169434-89169462
64251 chr8 28013527 28013527 1 + G T UCEC 28013524 + 28013504 28013544 41 CCTGAGAGAGCTGGCACTTGCAAGAATGAAAGACCTCGGAA CCTGAGAGAGCTGGCACTTGCAATAATGAAAGACCTCGGAA < 41bp 0.924166663498114 0.692966319492825 0.78812087 0.19387871 prediction 0.462400688010578 Functional Loss - ELP3 ENSG00000134014 CDS Human protein_coding chr8:28013524 chr8:28013527 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_74225 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:28013469-28013533
64251 chr22 42209326 42209326 1 + G A rs75440668 42209323 + 42209303 42209343 41 GGCGATGTGGTGCTGCGCTTCCCGAGGATTGTGCACTATTA GGCGATGTGGTGCTGCGCTTCCCAAGGATTGTGCACTATTA < 41bp 0.756537339480766 0.525350988397388 0.30181202 0.10240346 prediction 0.462372702166756 Functional Loss - CCDC134 ENSG00000100147 CDS Human protein_coding chr22:42209323 chr22:42209326 synonymous SNV . 0 24 hm5C_associated_SNPs_74235 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:42209299-42209339
64251 chr17 15903505 15903505 1 + G C SKCM 15903501 + 15903481 15903521 41 GGGAGCCGACGGGGCCGCTGCCGAGGACGGGGCGGACGAGG GGGAGCCGACGGGGCCGCTGCCGACGACGGGGCGGACGAGG < 41bp 0.763998079031325 0.532815557468649 0.9011282 0.7457797 prediction 0.462365043125352 Functional Loss - TTC19 ENSG00000011295 CDS Human protein_coding chr17:15903501 chr17:15903505 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_74236 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:15903500-15903520
64251 chr2 179238682 179238682 1 + C T SKCM 179238679 + 179238659 179238699 41 GTAGCCAATGAGAGCCGCCTCTCCATGTCAGAGTCTGTTTC GTAGCCAATGAGAGCCGCCTCTCTATGTCAGAGTCTGTTTC < 41bp 0.743453980276606 0.512277509339407 0.9596182 0.9201623 prediction 0.462352941874396 Functional Loss - OSBPL6 ENSG00000079156 CDS Human protein_coding chr2:179238679 chr2:179238682 synonymous SNV . 0 24 hm5C_associated_SNPs_74239 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:179238682-179238683
64251 chr17 80696402 80696402 1 + A C UCEC 80696398 + 80696378 80696418 41 TTGAGGGGGAGGTGGCCAGCCTGGAGGCCCTCAGGAGCACG TTGAGGGGGAGGTGGCCAGCCTGGCGGCCCTCAGGAGCACG < 41bp 0.925612587634078 0.694438382780121 0.61552334 0.5666889 prediction 0.462348409707914 Functional Loss - FN3K ENSG00000167363 CDS Human protein_coding chr17:80696398 chr17:80696402 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_74242 0 0 6 CSTF2T POSTAR2 ENCODE chr17:80696377-80696440
64251 chr12 132281825 132281825 1 + C T rs140589847 132281823 + 132281803 132281843 41 GCAAGCAGGCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCAC GCAAGCAGGCAGCGCCCCGGCCTGCGGCCCCCGCGGCCCAC < 41bp 0.731173512323286 0.492086030603214 0.54896706 0.43183848 prediction 0.462347024646572 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281823 chr12:132281825 synonymous SNV . 0 23 hm5C_associated_SNPs_74243 0 0 3 PPIG POSTAR2 ENCODE chr12:132281793-132281830
64251 chr19 41822332 41822332 1 + G A LAML 41822329 + 41822309 41822349 41 GGGCACTGGGGTGAGCTGAGCCGGACACCAGTCCCATCTAA GGGCACTGGGGTGAGCTGAGCCGAACACCAGTCCCATCTAA < 41bp 0.731165330390817 0.49025899348748 0.84526813 0.39503625 prediction 0.462330660781635 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822329 chr19:41822332 synonymous SNV . 0 24 hm5C_associated_SNPs_74247 0 0 1 SF3B4 POSTAR2 ENCODE chr19:41822235-41822344
64251 chr2 27147901 27147901 1 + G T LUSC 27147898 + 27147878 27147918 41 GCCCTCCACGTGGGGATCACCTGGTGGGCACCCAAGGTAAC GCCCTCCACGTGGGGATCACCTGTTGGGCACCCAAGGTAAC < 41bp 0.731161255599537 0.328099792301844 0.45556024 0.04806328 prediction 0.462322511199075 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27147898 chr2:27147901 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_74252 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27147863-27147913
64251 chr19 49979782 49979782 1 + G A PRAD 49979779 + 49979759 49979799 41 AGATGCAAGGCTTGCTGGAGCGCGTGAACACGGAGATACAC AGATGCAAGGCTTGCTGGAGCGCATGAACACGGAGATACAC < 41bp 0.731157635673744 0.487214839815643 0.33378512 0.18820953 prediction 0.462315271347489 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49979779 chr19:49979782 nonsynonymous SNV 0.586 2 24 hm5C_associated_SNPs_74256 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:49979744-49979782
64251 chr18 12325505 12325505 1 + G A UCEC 12325502 + 12325482 12325522 41 ACCATGAGTGGGGTCACCACCTCGCTGCGCTTCCCGGGCCA ACCATGAGTGGGGTCACCACCTCACTGCGCTTCCCGGGCCA < 41bp 0.785707631158136 0.554552475062774 0.89602065 0.24321875 prediction 0.462310312190723 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325502 chr18:12325505 synonymous SNV . 0 24 hm5C_associated_SNPs_74257 0 0 1 RPS3 POSTAR2 ENCODE chr18:12325487-12325523
64251 chr2 219292725 219292725 1 + G T SARC 219292722 + 219292702 219292742 41 GCGTGGCTTCTGGCATGAAGCACGTGGAGACCAACTCCTAT GCGTGGCTTCTGGCATGAAGCACTTGGAGACCAACTCCTAT < 41bp 0.731148262185642 0.332299805768958 0.2903322 0.11731908 prediction 0.462296524371283 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292722 chr2:219292725 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_74264 0 0 1 SF3B4 POSTAR2 ENCODE chr2:219292633-219292728
64251 chr4 56734654 56734654 1 + G T LGG 56734652 + 56734632 56734672 41 CTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGC CTCGAATGCGGAAGCCTTTGCATAAAAATTGTCCAGAGAGC < 41bp 0.731139151102844 0.389808300244716 0.17379293 0.08681515 prediction 0.462278302205689 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56734652 chr4:56734654 stopgain 0.998 1 23 hm5C_associated_SNPs_74269 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr4:56734627-56734654
64251 chrX 40450535 40450535 1 + G A UCEC 40450532 + 40450512 40450552 41 GGGTAACCTGTTTCATCGTCCTCGGGCTACCGTCATGGTGA GGGTAACCTGTTTCATCGTCCTCAGGCTACCGTCATGGTGA < 41bp 0.740371370807102 0.509247996104385 0.05556363 0.02541855 prediction 0.462246749405435 Functional Loss - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450532 chrX:40450535 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_74279 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:40450516-40450549
64251 chr19 50099218 50099218 1 + G A rs143035740 50099215 + 50099195 50099235 41 ACCGGCCATTCCCCAGCGCTCTCGGGCCATGGGGGTGGCTG ACCGGCCATTCCCCAGCGCTCTCAGGCCATGGGGGTGGCTG < 41bp 0.765171226881867 0.534049523555572 0.24291453 0.13422033 prediction 0.462243406652588 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099215 chr19:50099218 synonymous SNV . 0 24 hm5C_associated_SNPs_74281 0 1 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50099194-50099236
64251 chr5 32712408 32712408 1 + C T STAD 32712406 + 32712386 32712426 41 CTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCGCCTACG CTCTGAGTACTCGCACCTCACGTGCGTGGCGCCCGCCTACG < 41bp 0.731118123941732 0.487593648152544 0.41736087 0.64086324 prediction 0.462236247883465 Functional Loss - NPR3 ENSG00000113389 CDS Human protein_coding chr5:32712406 chr5:32712408 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_74286 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:32712338-32712430
64251 chr11 119050942 119050942 1 + G A UCEC 119050939 + 119050919 119050959 41 TGAACTTGGCCTCCTGCCAGCTAGATCCTGCTGGGCTGCGC TGAACTTGGCCTCCTGCCAGCTAAATCCTGCTGGGCTGCGC < 41bp 0.764482443220588 0.533366478451086 0.25279146 0.37929937 prediction 0.462231929539004 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050939 chr11:119050942 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_74290 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119050942-119050979
64251 chr12 7047972 7047972 1 + G A PAAD 7047969 + 7047949 7047989 41 CCTCCGTGACCGCCTCAAGCCTGGCTTTGAGGTGAAGCCTA CCTCCGTGACCGCCTCAAGCCTGACTTTGAGGTGAAGCCTA < 41bp 0.731114358548772 0.486700601398995 0.16908595 0.033521175 prediction 0.462228717097543 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7047969 chr12:7047972 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_74292 0 0 4 ALKBH5 POSTAR2 GSE38201,GSM936506 chr12:7047952-7047982
64251 chr11 67257834 67257834 1 + G A rs141715817 67257831 + 67257811 67257851 41 ATCCAGCTGGACCAGCAGATCACGCCGCTGCTGCTCAACTA ATCCAGCTGGACCAGCAGATCACACCGCTGCTGCTCAACTA < 41bp 0.770195687864955 0.539085813674342 0.62871885 0.28233093 prediction 0.462219748381225 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67257831 chr11:67257834 synonymous SNV . 0 24 hm5C_associated_SNPs_74300 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67257827-67257850
64251 chr11 82643195 82643195 1 + A T SKCM 82643191 + 82643171 82643211 41 GTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATC GTAAGGCCTTTGGTACTCTTCAGCTGAACAGAAAGTCCATC < 41bp 0.731102969322708 0.414600333197356 0.3865734 0.34879315 prediction 0.462205938645415 Functional Loss - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82643191 chr11:82643195 nonsynonymous SNV 0.381 2 25 hm5C_associated_SNPs_74305 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:82643171-82643196
64251 chr2 26616401 26616401 1 + A T rs1367231 26616397 + 26616377 26616417 41 TTGCATGTGCTTAGAAAGGCCAGGATCCCAGAATTGGAAGG TTGCATGTGCTTAGAAAGGCCAGGTTCCCAGAATTGGAAGG < 41bp 0.731096633591437 0.470592743225234 0.2459555 0.16107017 prediction 0.462193267182874 Functional Loss - SELENOI ENSG00000138018 UTR3 Human protein_coding chr2:26616397 chr2:26616401 . . 0 25 hm5C_associated_SNPs_74309 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704216 chr2:26616390-26616411
64251 chr4 41984148 41984148 1 + C T COAD 41984146 + 41984126 41984166 41 CTCTGAAGATCCCTTCGTTCCACGTGTACGTGCTCAGAAAC CTCTGAAGATCCCTTCGTTCCATGTGTACGTGCTCAGAAAC < 41bp 0.796833121064393 0.565737869209586 0.5144447 0.38591146 prediction 0.462190503709615 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984146 chr4:41984148 synonymous SNV . 0 23 hm5C_associated_SNPs_74311 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:41984108-41984154
64251 chr1 222906491 222906491 1 + G A rs149847057 222906488 + 222906468 222906508 41 CTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAACCCTCC CTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCCTCC < 41bp 0.767323465911525 0.536235001539816 0.84905595 0.44976625 prediction 0.462176928743417 Functional Loss - BROX ENSG00000162819 UTR3 Human protein_coding chr1:222906488 chr1:222906491 . . 0 24 hm5C_associated_SNPs_74315 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:222906480-222906500
64251 chr1 45479413 45479413 1 + C T UCEC 45479411 + 45479391 45479431 41 GTTCCAAGCCATCACCCTTACCCGACAACGACTGGCTGGAC GTTCCAAGCCATCACCCTTACCTGACAACGACTGGCTGGAC < 41bp 0.841499571659274 0.610425555630729 0.18644547 0.25756177 prediction 0.462148032057091 Functional Loss - UROD ENSG00000126088 CDS Human protein_coding chr1:45479411 chr1:45479413 stopgain 1.000 1 23 hm5C_associated_SNPs_74320 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:45479403-45479432
64251 chr8 27657117 27657117 1 + T C STAD 27657116 + 27657096 27657136 41 CCCAAGCTCTACGGAATGTCCTAGGGCTTGGCAATGTTCAG CCCAAGCTCTACGGAATGTCCCAGGGCTTGGCAATGTTCAG < 41bp 0.775903792032527 0.544833544413065 0.07167849 0.21846196 prediction 0.462140495238924 Functional Loss - ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27657116 chr8:27657117 synonymous SNV . 0 22 hm5C_associated_SNPs_74322 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:27657113-27657136
64251 chr16 3339416 3339416 1 + G A LUAD 3339413 + 3339393 3339433 41 GAGAAGAGAAATTTGAGAACCTGGAAGGTGTTCCGTCTGTA GAGAAGAGAAATTTGAGAACCTGAAAGGTGTTCCGTCTGTA < 41bp 0.740068757432787 0.509001403618286 0.42829204 0.2599563 prediction 0.462134707629001 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339413 chr16:3339416 stopgain 0.056 0 24 hm5C_associated_SNPs_74324 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:3339400-3339420
64251 chr2 242509595 242509595 1 + G A SKCM 242509592 + 242509572 242509612 41 GCGGTGGCCGCGGGGCTGGCCGTGGACTGTGTGAGGCAGGC GCGGTGGCCGCGGGGCTGGCCGTAGACTGTGTGAGGCAGGC < 41bp 0.743210688103029 0.512153867805107 0.82917625 0.64264494 prediction 0.462113640595844 Functional Loss - BOK ENSG00000176720 CDS Human protein_coding chr2:242509592 chr2:242509595 synonymous SNV . 0 24 hm5C_associated_SNPs_74330 0 0 5 WTAP POSTAR2 GSE46705,GSM1135010 chr2:242509590-242509607
64251 chr17 79968738 79968738 1 + G C UCEC 79968734 + 79968714 79968754 41 CTACAGGGCTTCTTCCGCCCCAGCGAGACAGGTGGGCAGCG CTACAGGGCTTCTTCCGCCCCAGCCAGACAGGTGGGCAGCG < 41bp 0.731055027979229 0.434591672591871 0.58781683 0.13538581 prediction 0.462110055958457 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79968734 chr17:79968738 nonsynonymous SNV 0.828 4 25 hm5C_associated_SNPs_74331 0 0 3 GRWD1 POSTAR2 ENCODE chr17:79968708-79968740
64251 chrX 56755883 56755883 1 + C T UCEC 56755881 + 56755861 56755901 41 AAAGCGCTGCCTCCTCGCTCCGCGTTGGGATTATCCGGAAG AAAGCGCTGCCTCCTCGCTCCGTGTTGGGATTATCCGGAAG < 41bp 0.73105216362767 0.484135974034584 0.32376686 0.2165429 prediction 0.462104327255339 Functional Loss - NBDY ENSG00000204272 ncRNA_exonic Human protein_coding chrX:56755881 chrX:56755883 . . 0 23 hm5C_associated_SNPs_74334 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:56755864-56755889
64251 chrX 56755884 56755884 1 + G A UCEC 56755881 + 56755861 56755901 41 AAAGCGCTGCCTCCTCGCTCCGCGTTGGGATTATCCGGAAG AAAGCGCTGCCTCCTCGCTCCGCATTGGGATTATCCGGAAG < 41bp 0.73105216362767 0.489079945286942 0.32376686 0.025527775 prediction 0.462104327255339 Functional Loss - NBDY ENSG00000204272 ncRNA_exonic Human protein_coding chrX:56755881 chrX:56755884 . . 0 24 hm5C_associated_SNPs_74335 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:56755864-56755889
64251 chr22 21922044 21922044 1 + G T LIHC 21922042 + 21922022 21922062 41 ACCAAATCCAAGATGGCGGCCAGCAGGAGGCTGATGAAGGT ACCAAATCCAAGATGGCGGCCATCAGGAGGCTGATGAAGGT < 41bp 0.731045177624097 0.392976191935342 0.41381016 0.38645673 prediction 0.462090355248195 Functional Loss - UBE2L3 ENSG00000185651 CDS Human protein_coding chr22:21922042 chr22:21922044 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_74340 0 0 3 NCBP2 POSTAR2 ENCODE chr22:21922012-21922066
64251 chr20 61909505 61909505 1 + G A rs143542168 61909502 + 61909482 61909522 41 CCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTTTGAAGA CCGCAGAGTGTGACCGCCTCCTCAGACAAGGCTTTTGAAGA < 41bp 0.748621069034776 0.517575986125646 0.061045915 0.020027786 prediction 0.46209016581826 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61909502 chr20:61909505 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_74341 0 0 13 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr20:61909480-61909520
64251 chr14 59789695 59789695 1 + C T UCEC 59789693 + 59789673 59789713 41 GGACTACGAGACCTCAGAGTCTCGAATACATACTTCTCTCA GGACTACGAGACCTCAGAGTCTTGAATACATACTTCTCTCA < 41bp 0.731041934430189 0.427205892841707 0.5797049 0.07150528 prediction 0.462083868860377 Functional Loss - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59789693 chr14:59789695 stopgain 0.999 1 23 hm5C_associated_SNPs_74342 0 0 5 BUD13 POSTAR2 ENCODE chr14:59789599-59789703
64251 chr9 133577570 133577570 1 + A T LUAD 133577566 + 133577546 133577586 41 TTTCCCCCTCCCTGGTGAAACGGCAGAAGACCCACTTTCAT TTTCCCCCTCCCTGGTGAAACGGCTGAAGACCCACTTTCAT < 41bp 0.88765771316626 0.656619299067063 0.41924104 0.38568127 prediction 0.462076828198394 Functional Loss - EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133577566 chr9:133577570 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_74343 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr9:133577560-133577581
64251 chr11 65729347 65729347 1 + C T UCS 65729345 + 65729325 65729365 41 CCACCGAGCAGCCGCCGCGGCACCGGGAACACAAAAAACAC CCACCGAGCAGCCGCCGCGGCATCGGGAACACAAAAAACAC < 41bp 0.731034476497871 0.497693724317162 0.13393697 0.18373686 prediction 0.462068952995742 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65729345 chr11:65729347 synonymous SNV . 0 23 hm5C_associated_SNPs_74347 0 0 1 DDX3X POSTAR2 ENCODE chr11:65729200-65729358
64251 chr5 141309176 141309176 1 + G A rs201802656 141309173 + 141309153 141309193 41 GACAACACATCCTCCCCAGCCCCGATGGCCCAGCTCCCAGG GACAACACATCCTCCCCAGCCCCAATGGCCCAGCTCCCAGG < 41bp 0.785018331779112 0.553989715331691 0.06420401 0.21116146 prediction 0.462057232894842 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141309173 chr5:141309176 nonsynonymous SNV 0.031 0 24 hm5C_associated_SNPs_74351 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr5:141309176-141309177
64251 chr3 197483348 197483348 1 + G T UCEC 197483345 + 197483325 197483365 41 AGGGAAGAAGCAGAATTTTCCAAGACTAAATAGAAGACTCC AGGGAAGAAGCAGAATTTTCCAATACTAAATAGAAGACTCC < 41bp 0.731026095885656 0.45716038032433 0.25309885 0.061369717 prediction 0.462052191771311 Functional Loss - FYTTD1 ENSG00000122068 CDS Human protein_coding chr3:197483345 chr3:197483348 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_74353 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:197483313-197483353
64251 chr11 118947771 118947771 1 + C T rs114313869 118947769 + 118947749 118947789 41 TATACCAAGCTCAAGGACAGCTCGAAGCTGGAGGAGTTCAT TATACCAAGCTCAAGGACAGCTTGAAGCTGGAGGAGTTCAT < 41bp 0.731025077968855 0.443039868133336 0.117402315 0.0840528 prediction 0.46205015593771 Functional Loss - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118947769 chr11:118947771 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_74355 0 0 1 ZNF622 POSTAR2 ENCODE chr11:118947767-118947795
64251 chr2 130940331 130940331 1 + G A rs375693364 130940328 + 130940308 130940348 41 GGCCGTGTCTCTGCCCACGTCGAGCGTGCCCGAGACCCGAG GGCCGTGTCTCTGCCCACGTCGAACGTGCCCGAGACCCGAG < 41bp 0.765453724682584 0.534429474868499 0.7641865 0.29350114 prediction 0.462048499628171 Functional Loss - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130940328 chr2:130940331 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_74356 0 0 6 LARP4 POSTAR2 ENCODE chr2:130940322-130940348
64251 chr6 27776021 27776021 1 + C T BLCA 27776019 + 27775999 27776039 41 TGGCAAGCAGGGAGGCAAAGCTCGCGCCAAGGCCAAGACCC TGGCAAGCAGGGAGGCAAAGCTTGCGCCAAGGCCAAGACCC < 41bp 0.739769595236909 0.508750065823301 0.34362638 0.28908765 prediction 0.462039058827216 Functional Loss - HIST1H2AI ENSG00000196747 CDS Human protein_coding chr6:27776019 chr6:27776021 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_74359 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27775975-27776029
64251 chr4 166385732 166385732 1 + G C LUSC 166385728 + 166385708 166385748 41 CCCAGATGGCTTTGAGAAGGCAGCGTCTCAGGTGAGTGCCA CCCAGATGGCTTTGAGAAGGCAGCCTCTCAGGTGAGTGCCA < 41bp 0.731013072323847 0.441521657795203 0.079679966 0.06262785 prediction 0.462026144647694 Functional Loss - CPE ENSG00000109472 CDS Human protein_coding chr4:166385728 chr4:166385732 synonymous SNV . 0 25 hm5C_associated_SNPs_74361 0 0 4 PRPF8 POSTAR2 ENCODE chr4:166385720-166385765
64251 chr2 242274603 242274603 1 + G T UCEC 242274601 + 242274581 242274621 41 ATTCCTAACTGATCTGTACCCAGAAAGAGTCATACCTGGAG ATTCCTAACTGATCTGTACCCATAAAGAGTCATACCTGGAG < 41bp 0.731011564260326 0.393501895122162 0.8868412 0.33256692 prediction 0.462023128520652 Functional Loss - SEPT2 ENSG00000168385 CDS Human protein_coding chr2:242274601 chr2:242274603 stopgain 1.000 1 23 hm5C_associated_SNPs_74363 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:242274527-242274611
64251 chr1 32625048 32625048 1 + G T COAD 32625046 + 32625026 32625066 41 ATATTGCCTCTGGAACCTCTCAGCAGACCAAAATTGTCATT ATATTGCCTCTGGAACCTCTCATCAGACCAAAATTGTCATT < 41bp 0.730999437953057 0.386962605666946 0.85438585 0.25690138 prediction 0.461998875906114 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32625046 chr1:32625048 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_74370 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:32625019-32625054
64251 chr18 8784364 8784364 1 + G A SKCM 8784361 + 8784341 8784381 41 CCTGTTGGCGGGGAGAGTGACTCGGAGGAAATGTTTGAGAA CCTGTTGGCGGGGAGAGTGACTCAGAGGAAATGTTTGAGAA < 41bp 0.769775551054506 0.538781258145387 0.23878929 0.08915624 prediction 0.461988585818239 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784361 chr18:8784364 synonymous SNV . 0 24 hm5C_associated_SNPs_74373 0 0 2 EIF3H POSTAR2 ENCODE chr18:8784316-8784404
64251 chr22 41924576 41924576 1 + G A UCEC 41924573 + 41924553 41924593 41 AGACGCAGATTGAGTGGTTCCGCGCTGGCAGTGCCCTCAAC AGACGCAGATTGAGTGGTTCCGCACTGGCAGTGCCCTCAAC < 41bp 0.751568716932348 0.520576361417011 0.09452647 0.046019375 prediction 0.461984711030674 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924573 chr22:41924576 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_74374 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:41924558-41924580
64251 chr1 9662277 9662277 1 + G A rs369146558 9662274 + 9662254 9662294 41 TTGTGCTGCCTGGTTGGCTTCACGGCGGCTGTGGCCACAAG TTGTGCTGCCTGGTTGGCTTCACAGCGGCTGTGGCCACAAG < 41bp 0.730992174583724 0.494676897445157 0.40475753 0.30183524 prediction 0.461984349167448 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9662274 chr1:9662277 synonymous SNV . 0 24 hm5C_associated_SNPs_74375 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:9662270-9662294
64251 chr20 56138162 56138162 1 + C T SKCM 56138160 + 56138140 56138180 41 CCTGACCGCAGAGAGATCATCTCCTTTGGCAGTGGGTACGG CCTGACCGCAGAGAGATCATCTTCTTTGGCAGTGGGTACGG < 41bp 0.730991678152423 0.436148428397315 0.17074955 0.06247735 prediction 0.461983356304846 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56138160 chr20:56138162 nonsynonymous SNV 0.966 4 23 hm5C_associated_SNPs_74376 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:56138154-56138179
64251 chr19 48832637 48832637 1 + G A rs535964111 48832634 + 48832614 48832654 41 CTGAAGGCGGTGCAGGTCCTCATGGTGCTCTCCCTCATTCT CTGAAGGCGGTGCAGGTCCTCATAGTGCTCTCCCTCATTCT < 41bp 0.777127273292305 0.546148221224668 0.26043332 0.31639326 prediction 0.461958104135275 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832634 chr19:48832637 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_74384 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48832620-48832640
64251 chr16 29814250 29814250 1 + G A BLCA 29814247 + 29814227 29814267 41 AGACAGTGGAAGAGAAGGACCTAGAGATTGAGGTACGTGTT AGACAGTGGAAGAGAAGGACCTAAAGATTGAGGTACGTGTT < 41bp 0.747914834366927 0.516941835359114 0.056971252 0.020199507 prediction 0.461945998015626 Functional Loss - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29814247 chr16:29814250 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_74386 0 0 6 DDX24 POSTAR2 ENCODE chr16:29814236-29814257
64251 chr5 138266342 138266342 1 + C T KIRP 138266340 + 138266320 138266360 41 GATGGAGATGACAGACTTTACCCGGTGAGCAGCACCCCGGC GATGGAGATGACAGACTTTACCTGGTGAGCAGCACCCCGGC < 41bp 0.813590725337006 0.582651586606299 0.9062781 0.8974971 prediction 0.461878277461414 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266340 chr5:138266342 stopgain 0.979 1 23 hm5C_associated_SNPs_74397 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:138266308-138266342
64251 chr19 54652195 54652195 1 + A C COAD 54652191 + 54652171 54652211 41 CCTAGCGGAGGCGGAGGCGGCGGCAGCGGAGGTGGAGGGAG CCTAGCGGAGGCGGAGGCGGCGGCCGCGGAGGTGGAGGGAG < 41bp 0.927591262647844 0.696658426363239 0.9156834 0.9136679 prediction 0.46186567256921 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652191 chr19:54652195 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_74401 0 0 4 BUD13 POSTAR2 ENCODE chr19:54652156-54652200
64251 chr4 86491782 86491782 1 + G T STAD 86491779 + 86491759 86491799 41 AGTGTGGGTGGCTGAGGAAGCAAGGAGGCTTTGTCAAGACT AGTGTGGGTGGCTGAGGAAGCAATGAGGCTTTGTCAAGACT < 41bp 0.730932401633856 0.367668696424586 0.38452068 0.06857377 prediction 0.461864803267712 Functional Loss - ARHGAP24 ENSG00000138639 CDS Human protein_coding chr4:86491779 chr4:86491782 stopgain 1.000 1 24 hm5C_associated_SNPs_74404 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:86491760-86491796
64251 chr14 24605579 24605579 1 + A C rs557284323 24605575 + 24605555 24605595 41 CTGGAGCGGCCGGGGGCATCCCCGACCCGCCCCCCAGGCTC CTGGAGCGGCCGGGGGCATCCCCGCCCCGCCCCCCAGGCTC < 41bp 0.897251342866378 0.666323588573496 0.5178055 0.5452649 prediction 0.461855508585763 Functional Loss - PSME1 ENSG00000092010 intronic Human protein_coding chr14:24605575 chr14:24605579 . . 0 25 hm5C_associated_SNPs_74405 0 0 3 BUD13 POSTAR2 ENCODE chr14:24605553-24605580
64251 chr20 61468563 61468563 1 + G A HNSC 61468560 + 61468540 61468580 41 CCATTGGTCACCCTGGCGCTCGAGGACCCCCTGGATACCGC CCATTGGTCACCCTGGCGCTCGAAGACCCCCTGGATACCGC < 41bp 0.744156530492095 0.513229033963068 0.9137653 0.74761176 prediction 0.461854993058054 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468560 chr20:61468563 nonsynonymous SNV 0.500 4 24 hm5C_associated_SNPs_74406 0 0 1 SND1 POSTAR2 ENCODE chr20:61468544-61468617
64251 chr5 131719911 131719911 1 + G A COAD 131719908 + 131719888 131719928 41 TTCAGCTTCCTGCAGATCTTCTCGAAGAATTTTGAGATGTT TTCAGCTTCCTGCAGATCTTCTCAAAGAATTTTGAGATGTT < 41bp 0.730925878760667 0.492256377249254 0.89837384 0.4699948 prediction 0.461851757521335 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131719908 chr5:131719911 synonymous SNV . 0 24 hm5C_associated_SNPs_74407 0 0 1 SF3B4 POSTAR2 ENCODE chr5:131719781-131719919
64251 chr12 54447926 54447926 1 + G C OV 54447922 + 54447902 54447942 41 CAGTATAGCTGCACCAGTCTCCAGGGGCCCGGCAATTCGCG CAGTATAGCTGCACCAGTCTCCAGCGGCCCGGCAATTCGCG < 41bp 0.730924685480828 0.443163628587318 0.952029 0.810453 prediction 0.461849370961656 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54447922 chr12:54447926 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_74408 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:54447905-54447935
64251 chr7 116538860 116538860 1 + C T OV 116538858 + 116538838 116538878 41 GTATAACTTGGACCAGTTTACTCCAGTAAAAATTGAAGGTT GTATAACTTGGACCAGTTTACTTCAGTAAAAATTGAAGGTT < 41bp 0.856384783557321 0.625465203200446 0.90825766 0.15827352 prediction 0.461839160713749 Functional Loss - CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116538858 chr7:116538860 nonsynonymous SNV 0.984 2 23 hm5C_associated_SNPs_74411 0 0 13 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:116538836-116538863
64251 chr19 48259848 48259848 1 + C T GBM 48259846 + 48259826 48259866 41 GAGGAGGAATATGATCGAGCCTCGAGAGAGAGCCAAGTAAG GAGGAGGAATATGATCGAGCCTTGAGAGAGAGCCAAGTAAG < 41bp 0.834901841796626 0.603983914662276 0.39244753 0.11948943 prediction 0.4618358542687 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259846 chr19:48259848 stopgain 0.912 1 23 hm5C_associated_SNPs_74413 0 0 6 LIN28B POSTAR2 ENCODE chr19:48259815-48259861
64251 chrX 18912456 18912456 1 - C T PRAD 18912459 - 18912439 18912479 41 TGCTGAACCGCGTGCCGCAGCCCGAGTACCGGCAGCTGCTG TGCTGAACCGCGTGCCGCAGCCCAAGTACCGGCAGCTGCTG < 41bp 0.730911545088078 0.487672115302342 0.27453047 0.2272701 prediction 0.461823090176156 Functional Loss - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912459 chrX:18912456 nonsynonymous SNV 0.964 5 24 hm5C_associated_SNPs_74416 0 0 5 BUD13 POSTAR2 ENCODE chrX:18912454-18912501
64251 chr12 3120212 3120212 1 + G A THYM 3120209 + 3120189 3120229 41 CCGCTACATCAAGCTCCGGACAGGGAAGACCCGCACCAGGA CCGCTACATCAAGCTCCGGACAGAGAAGACCCGCACCAGGA < 41bp 0.780123357397968 0.549214368970236 0.81653106 0.21770635 prediction 0.461817976855463 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3120209 chr12:3120212 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_74418 0 0 2 BUD13 POSTAR2 ENCODE chr12:3120169-3120222
64251 chr22 37964748 37964748 1 + G T UCEC 37964746 + 37964726 37964766 41 AGGGCGCCCCAGGCAGGCAGCAGGACCCCAGTGCCCAGCAC AGGGCGCCCCAGGCAGGCAGCATGACCCCAGTGCCCAGCAC < 41bp 0.903108466972248 0.672202210519574 0.8502326 0.34372485 prediction 0.461812512905349 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964746 chr22:37964748 nonsynonymous SNV 0.019 4 23 hm5C_associated_SNPs_74419 0 0 3 NKRF POSTAR2 ENCODE chr22:37964716-37964763
64251 chr17 18003719 18003719 1 + C T BLCA 18003717 + 18003697 18003737 41 TGGAGTCTGTGGGCATCCGCCTCAACAAGCACAAGCCTAAC TGGAGTCTGTGGGCATCCGCCTTAACAAGCACAAGCCTAAC < 41bp 0.730901459436791 0.431627509996157 0.124058306 0.06505367 prediction 0.461802918873581 Functional Loss - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18003717 chr17:18003719 stopgain . 0 23 hm5C_associated_SNPs_74421 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:18003693-18003724
64251 chr12 110352349 110352349 1 + G A SKCM 110352346 + 110352326 110352366 41 GGGAGCAACTTATTCGAAATCTTGAGGAGGTGAGAGAGTTG GGGAGCAACTTATTCGAAATCTTAAGGAGGTGAGAGAGTTG < 41bp 0.747319208031244 0.516424393874604 0.11888301 0.15708286 prediction 0.461789628313279 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110352346 chr12:110352349 nonsynonymous SNV 0.111 4 24 hm5C_associated_SNPs_74424 0 0 1 ZNF622 POSTAR2 ENCODE chr12:110352322-110352395
64251 chr12 57906729 57906729 1 + T C STAD 57906728 + 57906708 57906748 41 ATTCTGAGCTGCTTAACAACCTGGGCAACTTCATCAACAGG ATTCTGAGCTGCTTAACAACCCGGGCAACTTCATCAACAGG < 41bp 0.756571664168103 0.525688407754466 0.051601738 0.19752675 prediction 0.461766512827273 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57906728 chr12:57906729 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_74427 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:57906703-57906746
64251 chr1 165859550 165859550 1 + C T LUAD 165859548 + 165859528 165859568 41 AGCTTCTACCGTGTCCTTACCTCGGAGCAGAAGGCCAAAGC AGCTTCTACCGTGTCCTTACCTTGGAGCAGAAGGCCAAAGC < 41bp 0.834139947807367 0.603264334517819 0.31410876 0.10404751 prediction 0.461751226579097 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165859548 chr1:165859550 nonsynonymous SNV 0.927 1 23 hm5C_associated_SNPs_74434 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:165859520-165859555
64251 chr7 150764060 150764060 1 + G T LUAD 150764057 + 150764037 150764077 41 CCACACCTCGGGCCCGACCCCGGGCCCCCCACAAGCCCCAT CCACACCTCGGGCCCGACCCCGGTCCCCCCACAAGCCCCAT < 41bp 0.730861935196925 0.327218841190047 0.88099337 0.8124943 prediction 0.461723870393851 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150764057 chr7:150764060 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_74442 0 0 3 DDX3X POSTAR2 ENCODE chr7:150764009-150764061
64251 chr5 93989039 93989039 1 + G T UCEC 93989036 + 93989016 93989056 41 TATACTTTGAGGAGAAAACGCAAGAAAGGAAAAGAAAGCAA TATACTTTGAGGAGAAAACGCAATAAAGGAAAAGAAAGCAA < 41bp 0.730859142159412 0.360052046640375 0.6053009 0.33355206 prediction 0.461718284318823 Functional Loss - SLF1 ENSG00000133302 CDS Human protein_coding chr5:93989036 chr5:93989039 nonsynonymous SNV 0.923 1 24 hm5C_associated_SNPs_74444 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:93989000-93989040
64251 chr5 76129104 76129104 1 + G T LUSC 76129101 + 76129081 76129121 41 TTCATTCCTGCCCTGAACATCACGACCTGTCATGATGTTTT TTCATTCCTGCCCTGAACATCACTACCTGTCATGATGTTTT < 41bp 0.730858147762455 0.339404654628286 0.13127974 0.06345984 prediction 0.46171629552491 Functional Loss - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76129101 chr5:76129104 synonymous SNV . 0 24 hm5C_associated_SNPs_74446 0 0 2 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:76129074-76129104
64251 chr22 29696151 29696151 1 + G T STAD 29696148 + 29696128 29696168 41 GAGCGCAGAGATCGGCCCTACTAGATGCAGAGACCCCGCAG GAGCGCAGAGATCGGCCCTACTATATGCAGAGACCCCGCAG < 41bp 0.915913502434862 0.685062796380152 0.28985056 0.29433525 prediction 0.461701412109421 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29696148 chr22:29696151 stoploss 0.991 0 24 hm5C_associated_SNPs_74451 0 0 39 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:29696115-29696198
64251 chr10 71266623 71266623 1 + G A CESC 71266620 + 71266600 71266640 41 CTGACGCTGCTGTACATCACCCGGGTGGAGGACATCATCAT CTGACGCTGCTGTACATCACCCGAGTGGAGGACATCATCAT < 41bp 0.750498574691755 0.519649930104474 0.48110777 0.34484908 prediction 0.461697289174562 Functional Loss - TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71266620 chr10:71266623 synonymous SNV . 0 24 hm5C_associated_SNPs_74452 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:71266616-71266651
64251 chr6 26045818 26045818 1 + G A LUAD 26045815 + 26045795 26045835 41 CGTCGCTACCAGAAGTCCACCGAGCTGCTGATCCGGAAGCT CGTCGCTACCAGAAGTCCACCGAACTGCTGATCCGGAAGCT < 41bp 0.767598655399406 0.536759648794057 0.7141519 0.73097646 prediction 0.461678013210698 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045815 chr6:26045818 synonymous SNV . 0 24 hm5C_associated_SNPs_74456 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:26045818-26045845
64251 chr10 102729419 102729419 1 + G C rs576210688 102729415 + 102729395 102729435 41 GCTGCGGGCCGGGGGTCGGGCAAGGCCTCCCCCACGTCCAT GCTGCGGGCCGGGGGTCGGGCAAGCCCTCCCCCACGTCCAT < 41bp 0.730830708320324 0.443118104682953 0.37004685 0.1871947 prediction 0.461661416640647 Functional Loss - SLF2;SEMA4G ENSG00000095539;ENSG00000055950 UTR5;UTR3 Human other chr10:102729415 chr10:102729419 . . 0 25 hm5C_associated_SNPs_74460 0 0 5 EFTUD2 POSTAR2 ENCODE chr10:102729385-102729514
64251 chr1 1168134 1168134 1 + C T SKCM 1168132 + 1168112 1168152 41 GTGCTCAAGGCGGACGACGACTCCTTCGCGCGGCTGGACGC GTGCTCAAGGCGGACGACGACTTCTTCGCGCGGCTGGACGC < 41bp 0.778610556220029 0.547780867973857 0.049653858 0.03582108 prediction 0.461659376492343 Functional Loss - B3GALT6 ENSG00000176022 CDS Human protein_coding chr1:1168132 chr1:1168134 nonsynonymous SNV 0.980 3 23 hm5C_associated_SNPs_74461 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:1168108-1168155
64251 chr1 155701790 155701790 1 + G A UCEC 155701787 + 155701767 155701807 41 GACTGGGTCTCTCTTTAAGCCCCGGAAAGCCTATCTGCCCC GACTGGGTCTCTCTTTAAGCCCCAGAAAGCCTATCTGCCCC < 41bp 0.768356844923714 0.537533184713232 0.30745995 0.1022211 prediction 0.461647320420965 Functional Loss - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155701787 chr1:155701790 nonsynonymous SNV 0.399 1 24 hm5C_associated_SNPs_74466 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:155701760-155701790
64251 chr7 148895636 148895636 1 + C T UCEC 148895634 + 148895614 148895654 41 CTGCTGAACCTGGAGGGGCGCACGGGGACAGCCGAGAAGAA CTGCTGAACCTGGAGGGGCGCATGGGGACAGCCGAGAAGAA < 41bp 0.730809627092881 0.470020287716683 0.89340323 0.88930905 prediction 0.461619254185761 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148895634 chr7:148895636 nonsynonymous SNV 0.427 4 23 hm5C_associated_SNPs_74470 0 0 2 PPIG POSTAR2 ENCODE chr7:148895594-148895639
64251 chr2 239353226 239353226 1 + C T UCEC 239353224 + 239353204 239353244 41 TCATGGATGCTGTTCTGCGCCACGGCTGTGAGGCAGCCTTC TCATGGATGCTGTTCTGCGCCATGGCTGTGAGGCAGCCTTC < 41bp 0.818833169717191 0.588026582925274 0.09582901 0.11763096 prediction 0.461613173583834 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239353224 chr2:239353226 synonymous SNV . 0 23 hm5C_associated_SNPs_74475 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:239353206-239353241
64251 chr19 36430384 36430384 1 + A C LUAD 36430380 + 36430360 36430400 41 GCCGCTGGCCCCTGCCTCATCCCCACCCCAGTCAGCCACAC GCCGCTGGCCCCTGCCTCATCCCCCCCCCAGTCAGCCACAC < 41bp 0.730799498192191 0.318042740180742 0.09588534 0.02504763 prediction 0.461598996384382 Functional Loss - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430380 chr19:36430384 synonymous SNV . 0 25 hm5C_associated_SNPs_74476 0 0 1 PCBP2 POSTAR2 ENCODE chr19:36430339-36430450
64251 chr2 9614683 9614683 1 + G C rs376507579 9614679 + 9614659 9614699 41 TGGCTGGCGGCCCCGCCCCGCCCCGCCCGGCTGCTCCATGG TGGCTGGCGGCCCCGCCCCGCCCCCCCCGGCTGCTCCATGG < 41bp 0.730786894275885 0.452950983798668 0.16323107 0.16551194 prediction 0.46157378855177 Functional Loss - IAH1 ENSG00000134330 UTR5 Human protein_coding chr2:9614679 chr2:9614683 . . 0 25 hm5C_associated_SNPs_74483 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:9614680-9614700
64251 chr1 46743873 46743873 1 + G A KIRC 46743870 + 46743850 46743890 41 GGGCTCCGGGATGAGGTACTCCAGGCTGCCTGGGATGCTGC GGGCTCCGGGATGAGGTACTCCAAGCTGCCTGGGATGCTGC < 41bp 0.742657098411161 0.511878703417324 0.9002325 0.53457874 prediction 0.461556789987675 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46743870 chr1:46743873 synonymous SNV . 0 24 hm5C_associated_SNPs_74484 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46743812-46743873
64251 chr20 56140545 56140545 1 + G A COAD 56140542 + 56140522 56140562 41 ATCTTCCATGTCAACTGGTTCCGGAAGGACAAGGAAGGCAA ATCTTCCATGTCAACTGGTTCCGAAAGGACAAGGAAGGCAA < 41bp 0.730774871331213 0.494875698325068 0.82503253 0.1840094 prediction 0.461549742662426 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140542 chr20:56140545 synonymous SNV . 0 24 hm5C_associated_SNPs_74485 0 0 2 GRWD1 POSTAR2 ENCODE chr20:56140519-56140620
64251 chr3 43756547 43756547 1 + C T SKCM 43756544 + 43756524 43756564 41 CTACCACTGTAATGTGCAGACTCCAAGGTGAGGGTTAGGAT CTACCACTGTAATGTGCAGACTCTAAGGTGAGGGTTAGGAT < 41bp 0.742824464568097 0.512051401623517 0.93033016 0.34272408 prediction 0.461546125889159 Functional Loss - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43756544 chr3:43756547 nonsynonymous SNV 0.979 5 24 hm5C_associated_SNPs_74488 0 0 1 EIF4G2 POSTAR2 ENCODE chr3:43756518-43756644
64251 chr7 6441972 6441972 1 + G A rs143737695 6441969 + 6441949 6441989 41 GCTGTAAAATACCTGGAGTGCTCGGCGCTCACACAGCGAGG GCTGTAAAATACCTGGAGTGCTCAGCGCTCACACAGCGAGG < 41bp 0.754194672621053 0.523422453014618 0.2731828 0.1604664 prediction 0.461544439212872 Functional Loss - RAC1 ENSG00000136238 CDS Human protein_coding chr7:6441969 chr7:6441972 synonymous SNV . 0 24 hm5C_associated_SNPs_74490 0 0 18 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:6441940-6441980
64251 chr2 220379699 220379699 1 + G A UCEC 220379696 + 220379676 220379716 41 CGCTGGCTGCCTTCCTGTACCAGGCGGCTGGCCTGGCCCGG CGCTGGCTGCCTTCCTGTACCAGACGGCTGGCCTGGCCCGG < 41bp 0.796728764687213 0.565958520568274 0.9353676 0.8095471 prediction 0.461540488237878 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379696 chr2:220379699 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_74491 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379653-220379732
64251 chr1 171755175 171755175 1 + G T LUSC 171755172 + 171755152 171755192 41 CATCCAAGCTGAGCTGTCGGCTAGAGTCATGGAGCTGGCCC CATCCAAGCTGAGCTGTCGGCTATAGTCATGGAGCTGGCCC < 41bp 0.924116910959835 0.693358311407439 0.18073192 0.1929776 prediction 0.461517199104792 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755172 chr1:171755175 nonsynonymous SNV 0.953 0 24 hm5C_associated_SNPs_74497 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:171755147-171755195
64251 chr12 31244706 31244706 1 + G A UCEC 31244703 + 31244683 31244723 41 CATGCGGCCACTCGGCAGGCCGCGGGCATCCGGCTGCAGGA CATGCGGCCACTCGGCAGGCCGCAGGCATCCGGCTGCAGGA < 41bp 0.766765967551909 0.536026341602983 0.88129026 0.61676043 prediction 0.461479251897852 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244703 chr12:31244706 synonymous SNV . 0 24 hm5C_associated_SNPs_74509 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr16 4432789 4432789 1 + A C LUAD 4432788 + 4432768 4432808 41 CTTGGAGCCAGGCCCGAAGGCAACAGAGGGCGGTGGAGAGG CTTGGAGCCAGGCCCGAAGGCCACAGAGGGCGGTGGAGAGG < 41bp 0.777800796845084 0.547065146501023 0.29955113 0.14856151 prediction 0.461471300688122 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4432788 chr16:4432789 synonymous SNV . 0 22 hm5C_associated_SNPs_74511 0 0 5 RPS3 POSTAR2 ENCODE chr16:4432731-4432797
64251 chr12 1893103 1893103 1 + C T SKCM 1893101 + 1893081 1893121 41 CCTACCTTGCACTATGTCATCTCGGAGGGGTTCCTTAAGGC CCTACCTTGCACTATGTCATCTTGGAGGGGTTCCTTAAGGC < 41bp 0.848867094301472 0.61813692717094 0.3055122 0.14709258 prediction 0.461460334261064 Functional Loss - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1893101 chr12:1893103 nonsynonymous SNV 0.929 0 23 hm5C_associated_SNPs_74513 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:1893079-1893116
64251 chr1 100732121 100732121 1 + C T CESC 100732119 + 100732099 100732139 41 TCTCTACGGCCTTGAGCTGTCTCCTAGGCCTCCCCTTGCGG TCTCTACGGCCTTGAGCTGTCTTCTAGGCCTCCCCTTGCGG < 41bp 0.825595586027859 0.594870684842791 0.41970387 0.5292535 prediction 0.461449802370135 Functional Loss - RTCA ENSG00000137996 CDS Human protein_coding chr1:100732119 chr1:100732121 synonymous SNV . 0 23 hm5C_associated_SNPs_74517 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:100732089-100732145
64251 chr10 75532995 75532995 1 + G A SKCM 75532992 + 75532972 75533012 41 CAGAATCGGGAGCTGCCTACCGCGCGGCTACAGGACACAGC CAGAATCGGGAGCTGCCTACCGCACGGCTACAGGACACAGC < 41bp 0.743698570108529 0.512975075910229 0.508084 0.2182706 prediction 0.461446988396601 Functional Loss - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75532992 chr10:75532995 synonymous SNV . 0 24 hm5C_associated_SNPs_74518 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:75532976-75533004
64251 chr9 128118025 128118025 1 + C T UCEC 128118023 + 128118003 128118043 41 CAGGATGTCATATGGCAAAACGCGAGTGAAGAACAGCTTCA CAGGATGTCATATGGCAAAACGTGAGTGAAGAACAGCTTCA < 41bp 0.836089976180483 0.605374261211084 0.38377073 0.20348766 prediction 0.461431429938799 Functional Loss - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128118023 chr9:128118025 nonsynonymous SNV 0.821 4 23 hm5C_associated_SNPs_74523 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:128118018-128118036
64251 chr3 12475550 12475550 1 + C T BLCA 12475548 + 12475528 12475568 41 ACAGACCTCAGACAGATTGTCACGGAACACGTGCAGCTACT ACAGACCTCAGACAGATTGTCATGGAACACGTGCAGCTACT < 41bp 0.7307071550483 0.47367396841135 0.83702004 0.81676066 prediction 0.461414310096599 Functional Loss - PPARG ENSG00000132170 CDS Human protein_coding chr3:12475548 chr3:12475550 nonsynonymous SNV 0.947 5 23 hm5C_associated_SNPs_74525 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:12475487-12475552
64251 chr16 84695566 84695566 1 + G T BLCA 84695564 + 84695544 84695584 41 CGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCGTGC CGGCTACAGCTGGGAGAACACTTCCTTCTCCAAGACCGTGC < 41bp 0.730706671240646 0.400618501901008 0.17671734 0.09013951 prediction 0.461413342481292 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695564 chr16:84695566 nonsynonymous SNV 0.989 0 23 hm5C_associated_SNPs_74527 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84695533-84695566
64251 chr1 46978132 46978132 1 + C T UCEC 46978130 + 46978110 46978150 41 CGGCTCCGGGCCAAGCAGCACGCGGCCTCCCTGGGACTCGA CGGCTCCGGGCCAAGCAGCACGTGGCCTCCCTGGGACTCGA < 41bp 0.785296911220384 0.554594475170259 0.59593123 0.32010925 prediction 0.461404872100251 Functional Loss - DMBX1 ENSG00000197587 CDS Human protein_coding chr1:46978130 chr1:46978132 nonsynonymous SNV 0.820 5 23 hm5C_associated_SNPs_74528 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46978127-46978165
64251 chr19 10747160 10747160 1 + G T UCEC 10747158 + 10747138 10747178 41 ACTTCGTGCTGGCGCTGGGCCAGGTCACGCTGGCCGGGGCC ACTTCGTGCTGGCGCTGGGCCATGTCACGCTGGCCGGGGCC < 41bp 0.730701197700055 0.368660061905555 0.82382846 0.2805885 prediction 0.46140239540011 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10747158 chr19:10747160 nonsynonymous SNV 0.897 2 23 hm5C_associated_SNPs_74529 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:10747134-10747160
64251 chr6 13977722 13977722 1 + G A COAD 13977719 + 13977699 13977739 41 TCTCTGGTCAGTCCTTCTCACACGTCCTCCAACTGCCTGGT TCTCTGGTCAGTCCTTCTCACACATCCTCCAACTGCCTGGT < 41bp 0.76864596829131 0.537945757192142 0.08647776 0.013879776 prediction 0.461400422198338 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977719 chr6:13977722 synonymous SNV . 0 24 hm5C_associated_SNPs_74530 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977674-13977732
64251 chr9 133967192 133967192 1 + G A rs187922750 133967189 + 133967169 133967209 41 CAGTGAGGGCTGCCCAGATCCCCGGCACACACTCCCCCACC CAGTGAGGGCTGCCCAGATCCCCAGCACACACTCCCCCACC < 41bp 0.744108439542333 0.513409925103307 0.1885482 0.08977008 prediction 0.461397028878053 Functional Loss - LAMC3 ENSG00000050555 UTR3 Human protein_coding chr9:133967189 chr9:133967192 . . 0 24 hm5C_associated_SNPs_74531 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133967169-133967219
64251 chr5 156723741 156723741 1 + G A SKCM 156723738 + 156723718 156723758 41 ATGAGAAGACAGTAGAGGTGCTGGAGCCGGAGGTCACCAAG ATGAGAAGACAGTAGAGGTGCTGAAGCCGGAGGTCACCAAG < 41bp 0.73077444263948 0.500076617214506 0.1969384 0.18535599 prediction 0.461395650849947 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156723738 chr5:156723741 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_74532 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:156723715-156723751
64251 chr2 96933137 96933137 1 + G T LUAD 96933135 + 96933115 96933155 41 AAGGTAGCCTGGTCCCCCTGCGGTAATTACCTGGCCTCTGC AAGGTAGCCTGGTCCCCCTGCGTTAATTACCTGGCCTCTGC < 41bp 0.730694307111233 0.38202673661375 0.4178542 0.404074 prediction 0.461388614222466 Functional Loss - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96933135 chr2:96933137 nonsynonymous SNV 0.916 4 23 hm5C_associated_SNPs_74536 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:96933100-96933137
64251 chr19 2917148 2917148 1 + T C LUSC 2917147 + 2917127 2917167 41 GGTGAGGAATGTAAGCAGGCCTGCATTTGTCCCTCACACCT GGTGAGGAATGTAAGCAGGCCCGCATTTGTCCCTCACACCT < 41bp 0.751752020790889 0.521065731253619 0.12132451 0.061375916 prediction 0.46137257907454 Functional Loss - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917147 chr19:2917148 nonsynonymous SNV 0.027 2 22 hm5C_associated_SNPs_74540 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:2917140-2917160
64251 chr6 150464584 150464584 1 + G A UCEC 150464581 + 150464561 150464601 41 GTAAGGAGCTTCGGAAGCGGCTGGTGCTGGAGGAATGGATC GTAAGGAGCTTCGGAAGCGGCTGATGCTGGAGGAATGGATC < 41bp 0.739324945778181 0.508642906096073 0.3305567 0.36621344 prediction 0.461364079364216 Functional Loss - PPP1R14C ENSG00000198729 CDS Human protein_coding chr6:150464581 chr6:150464584 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_74542 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr6:150464577-150464598
64251 chr17 27061926 27061926 1 + G A SKCM 27061923 + 27061903 27061943 41 CTCATCCTGCACCGAGACCTCAAGACCCAGAACATCCTGCT CTCATCCTGCACCGAGACCTCAAAACCCAGAACATCCTGCT < 41bp 0.7436778620918 0.513016888421884 0.21529695 0.102647215 prediction 0.461321947339832 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061923 chr17:27061926 synonymous SNV . 0 24 hm5C_associated_SNPs_74549 0 0 2 GRWD1 POSTAR2 ENCODE chr17:27061825-27062073
64251 chr4 160268094 160268094 1 + C T LUSC 160268092 + 160268072 160268112 41 AACCAGGGACTACAGGTTCCCGCCGTGTCCCTTTATCCTTC AACCAGGGACTACAGGTTCCCGTCGTGTCCCTTTATCCTTC < 41bp 0.826514719790349 0.595855197809567 0.027148128 0.032725662 prediction 0.461319043961564 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160268092 chr4:160268094 nonsynonymous SNV 0.776 1 23 hm5C_associated_SNPs_74551 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:160268082-160268102
64251 chr4 110384735 110384735 1 + A C rs144453883 110384734 + 110384714 110384754 41 CTCCAGGCCTTCCATCGACTCAAGACAATCTCATCCGAAAC CTCCAGGCCTTCCATCGACTCCAGACAATCTCATCCGAAAC < 41bp 0.730657886477107 0.467156667002103 0.2968759 0.18016055 prediction 0.461315772954214 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110384734 chr4:110384735 nonsynonymous SNV 0.312 1 22 hm5C_associated_SNPs_74552 0 0 12 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr4:110384709-110384750
64251 chrX 65417678 65417678 1 + G A LUSC 65417675 + 65417655 65417695 41 TCCCATAAGAGACACAAATTCTGGCCTGGTGGGCCCGCTGC TCCCATAAGAGACACAAATTCTGACCTGGTGGGCCCGCTGC < 41bp 0.780505132876835 0.549861329475946 0.36354506 0.092166185 prediction 0.461287606801779 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65417675 chrX:65417678 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_74559 0 0 3 FMR1 POSTAR2 ENCODE chrX:65417673-65417737
64251 chr16 50583366 50583366 1 + G A HNSC 50583363 + 50583343 50583383 41 CGCCGTGAGCGCTGCCTGGGCTCGGAAGGGCATCGAGGAGT CGCCGTGAGCGCTGCCTGGGCTCAGAAGGGCATCGAGGAGT < 41bp 0.775643136965994 0.5450011371485 0.17333242 0.099617094 prediction 0.461283999634988 Functional Loss - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50583363 chr16:50583366 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_74561 0 0 5 BUD13 POSTAR2 ENCODE chr16:50583327-50583370
64251 chr11 126201348 126201348 1 + A C UCEC 126201344 + 126201324 126201364 41 CTGCCACAGAGAAACACCTGCAGAAGTACCTGCGCCAGGAC CTGCCACAGAGAAACACCTGCAGACGTACCTGCGCCAGGAC < 41bp 0.730639329462586 0.312649173746767 0.8806937 0.8917959 prediction 0.461278658925172 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126201344 chr11:126201348 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_74562 0 0 1 IGF2BP2 POSTAR2 ENCODE chr11:126201344-126201446
64251 chr19 12924273 12924273 1 + G T PAAD 12924271 + 12924251 12924291 41 CGCGGCCTGGAGTCAGCAACCAGCCTCTAGCAGCTGCCTCT CGCGGCCTGGAGTCAGCAACCATCCTCTAGCAGCTGCCTCT < 41bp 0.730636369058618 0.379605411730582 0.2668259 0.12773967 prediction 0.461272738117236 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924271 chr19:12924273 nonsynonymous SNV 0.730 1 23 hm5C_associated_SNPs_74565 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:12924230-12924311
64251 chr7 148427271 148427271 1 + G A HNSC 148427268 + 148427248 148427288 41 CTGAAGCAGATTGGCCTGGACCAGATCTGGGACGACCTCAG CTGAAGCAGATTGGCCTGGACCAAATCTGGGACGACCTCAG < 41bp 0.751205027877111 0.520572065028049 0.5165745 0.3813004 prediction 0.461265925698123 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148427268 chr7:148427271 synonymous SNV . 0 24 hm5C_associated_SNPs_74568 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148427087-148427303
64251 chr22 42905063 42905063 1 + G A PRAD 42905060 + 42905040 42905080 41 AACAGCATTGACTTCGTCAGCAGGGAGCTGTGTGCGCATTC AACAGCATTGACTTCGTCAGCAGAGAGCTGTGTGCGCATTC < 41bp 0.750741517773889 0.520120991142859 0.9061616 0.87067485 prediction 0.461241053262061 Functional Loss - SERHL ENSG00000172250 ncRNA_exonic Human processed_transcript chr22:42905060 chr22:42905063 . . 0 24 hm5C_associated_SNPs_74576 0 0 1 BUD13 POSTAR2 ENCODE chr22:42905027-42905109
64251 chrX 129150017 129150017 1 + G A READ 129150014 + 129149994 129150034 41 TCGGGCTAAGGCCGGGCAGGCTCGAGTGAAACAGGAAAGCG TCGGGCTAAGGCCGGGCAGGCTCAAGTGAAACAGGAAAGCG < 41bp 0.764247094461114 0.533627536294068 0.22900748 0.26754797 prediction 0.461239116334092 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129150014 chrX:129150017 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_74577 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149992-129150017
64251 chr8 27296909 27296909 1 + A T LUAD 27296905 + 27296885 27296925 41 TTCACGACAGCCAGTGACGTCTGGATGTTCGGTGAGTGCTG TTCACGACAGCCAGTGACGTCTGGTTGTTCGGTGAGTGCTG < 41bp 0.730618684365125 0.399190330505408 0.33948863 0.1798271 prediction 0.46123736873025 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27296905 chr8:27296909 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_74579 0 0 1 DDX24 POSTAR2 ENCODE chr8:27296869-27296920
64251 chr7 97823767 97823767 1 + G T SARC 97823765 + 97823745 97823785 41 GCAACGAGGACGGAAGGCACCTGCGGAGTCTGTTGAAGCCC GCAACGAGGACGGAAGGCACCTTCGGAGTCTGTTGAAGCCC < 41bp 0.730617959261223 0.390116439990735 0.26601064 0.079478055 prediction 0.461235918522447 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97823765 chr7:97823767 synonymous SNV . 0 23 hm5C_associated_SNPs_74580 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr7:97823745-97823795
64251 chr2 3392343 3392343 1 + C T UCEC 3392341 + 3392321 3392361 41 CTGGCTTCCCGGCGAGGCTACGCGTGGAGTCCTGCGGGCCG CTGGCTTCCCGGCGAGGCTACGTGTGGAGTCCTGCGGGCCG < 41bp 0.799370480250425 0.568766167541135 0.53502053 0.5942872 prediction 0.46120862541858 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3392341 chr2:3392343 nonsynonymous SNV 0.003 4 23 hm5C_associated_SNPs_74589 0 0 2 RBM15 POSTAR2 ENCODE chr2:3392268-3392348
64251 chr2 179404315 179404315 1 + G T COAD 179404313 + 179404293 179404333 41 GAGGATGTAGCCTAAGATGTCAGCACCACCATCATCAGCAG GAGGATGTAGCCTAAGATGTCATCACCACCATCATCAGCAG < 41bp 0.730601354350023 0.410621839814251 0.11853272 0.029063672 prediction 0.461202708700047 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179404313 chr2:179404315 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_74592 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr2:179404286-179404334
64251 chr11 64950385 64950385 1 + G A CESC 64950382 + 64950362 64950402 41 GTACCCCAGAGCCTGGGTTACAAGGACCTGGGTCCCAATTC GTACCCCAGAGCCTGGGTTACAAAGACCTGGGTCCCAATTC < 41bp 0.782990957206723 0.552391526030229 0.9245502 0.36198807 prediction 0.461198862352987 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950382 chr11:64950385 synonymous SNV . 0 24 hm5C_associated_SNPs_74594 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64950373-64950412
64251 chr2 219294047 219294047 1 + G A LAML 219294044 + 219294024 219294064 41 AGGAGATCCGAGACCAGGAGCGGGGAGGGCGCACCTATGTA AGGAGATCCGAGACCAGGAGCGGAGAGGGCGCACCTATGTA < 41bp 0.799635490159646 0.569037312979425 0.73222905 0.32696643 prediction 0.461196354360443 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219294044 chr2:219294047 nonsynonymous SNV 0.404 4 24 hm5C_associated_SNPs_74595 0 0 1 RPS3 POSTAR2 ENCODE chr2:219294006-219294069
64251 chr2 70033627 70033627 1 + G A BRCA 70033624 + 70033604 70033644 41 GTGCAAGAGCTGCGAAGGGCCATGAAGGTCTGTGCTCTTCC GTGCAAGAGCTGCGAAGGGCCATAAAGGTCTGTGCTCTTCC < 41bp 0.743311745321096 0.512718150745764 0.18829796 0.22230998 prediction 0.461187189150664 Functional Loss - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70033624 chr2:70033627 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_74599 0 0 8 GRWD1 POSTAR2 ENCODE chr2:70033559-70033632
64251 chr20 4667334 4667334 1 + G C rs6052766 4667333 + 4667313 4667353 41 TGACGCGTCTCGGGCCTGCCCGGCTGCGCTGGTCTCCGCTC TGACGCGTCTCGGGCCTGCCCCGCTGCGCTGGTCTCCGCTC < 41bp 0.845972713698576 0.615379856823533 0.87625504 0.48026934 prediction 0.461185713750086 Functional Loss - PRNP ENSG00000171867 UTR5 Human protein_coding chr20:4667333 chr20:4667334 . . 0 22 hm5C_associated_SNPs_74600 0 0 1 HNRNPM POSTAR2 ENCODE chr20:4667251-4667379
64251 chr6 155577707 155577707 1 - G A DLBC 155577709 - 155577689 155577729 41 GTGCCGCTGCTCAAGCTGCCCTCGTCAGAGTCCAGCAAGGT GTGCCGCTGCTCAAGCTGCCCTTGTCAGAGTCCAGCAAGGT < 41bp 0.736202240626543 0.505610574302945 0.19910935 0.10953057 prediction 0.461183332647197 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577709 chr6:155577707 nonsynonymous SNV 0.881 0 23 hm5C_associated_SNPs_74601 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:155577677-155577715
64251 chr2 20647530 20647530 1 + G A BLCA 20647527 + 20647507 20647547 41 ACATCCCCGAGAAGTGGGTCCCCGAGGTGAAGCACTTCTGT ACATCCCCGAGAAGTGGGTCCCCAAGGTGAAGCACTTCTGT < 41bp 0.73997975805463 0.509388850818826 0.8991481 0.4027656 prediction 0.461181814471608 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647527 chr2:20647530 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_74602 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:20647460-20647640
64251 chr20 43541419 43541419 1 + G T UCEC 43541416 + 43541396 43541436 41 GGTGTGGGCAACATCTTCATCAAGAACCTGGAGGACTCCAT GGTGTGGGCAACATCTTCATCAATAACCTGGAGGACTCCAT < 41bp 0.73059060009 0.354217602393154 0.20792538 0.10769394 prediction 0.46118120018 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43541416 chr20:43541419 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_74603 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:43541378-43541459
64251 chr5 167826532 167826532 1 + G A UCEC 167826529 + 167826509 167826549 41 GAGAGATGGTTCACCTCCAGCACGAGCTGCAGTTCAAAGAG GAGAGATGGTTCACCTCCAGCACAAGCTGCAGTTCAAAGAG < 41bp 0.778945878566343 0.548357554696376 0.13749167 0.069542736 prediction 0.461176647739933 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167826529 chr5:167826532 nonsynonymous SNV 0.987 4 24 hm5C_associated_SNPs_74605 0 0 3 BUD13 POSTAR2 ENCODE chr5:167826521-167826588
64251 chr17 46138082 46138082 1 + G A rs148447094 46138079 + 46138059 46138099 41 CACTGGGGAGTCACCCTTCCCTCGGGCCTCTGCCTACCAAC CACTGGGGAGTCACCCTTCCCTCAGGCCTCTGCCTACCAAC < 41bp 0.731147138459842 0.500562740316508 0.11649087 0.024401337 prediction 0.461168796286669 Functional Loss - NFE2L1 ENSG00000082641 UTR3 Human protein_coding chr17:46138079 chr17:46138082 . . 0 24 hm5C_associated_SNPs_74608 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46137930-46138097
64251 chr11 75280084 75280084 1 + C T BLCA 75280082 + 75280062 75280102 41 TCATCATCCTCATGCCCCATCACGTGGAGCCTCTCGAGCGC TCATCATCCTCATGCCCCATCATGTGGAGCCTCTCGAGCGC < 41bp 0.730583950595898 0.458237871565239 0.21350646 0.22239017 prediction 0.461167901191796 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75280082 chr11:75280084 synonymous SNV . 0 23 hm5C_associated_SNPs_74609 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:75280049-75280088
64251 chr9 37486484 37486484 1 + C T UCEC 37486482 + 37486462 37486502 41 CTCCTTCCGCGAGACATTCCCTCCTGTCACAGCCCCTCCCC CTCCTTCCGCGAGACATTCCCTTCTGTCACAGCCCCTCCCC < 41bp 0.730580430113656 0.477216991320061 0.13388047 0.02408877 prediction 0.461160860227312 Functional Loss - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486482 chr9:37486484 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_74611 0 0 5 DDX59 POSTAR2 ENCODE chr9:37486473-37486573
64251 chr17 7591997 7591997 1 + C T rs17880282 7591995 + 7591975 7592015 41 TTTGGAGACTCAACCGTTAGCTCCGGACTGCTGTCCTTCAG TTTGGAGACTCAACCGTTAGCTTCGGACTGCTGTCCTTCAG < 41bp 0.774940580437142 0.544362923699823 0.32715714 0.2611558 prediction 0.461155313474638 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7591995 chr17:7591997 nonsynonymous SNV 0.201 1 23 hm5C_associated_SNPs_74614 2 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7591966-7592004
64251 chr4 148402402 148402402 1 + A C rs13306318 148402398 + 148402378 148402418 41 AAGCCGGGGAAGCTGTGCAGCCGAAGCCGCCGCCGCGCCGG AAGCCGGGGAAGCTGTGCAGCCGACGCCGCCGCCGCGCCGG < 41bp 0.871838170791725 0.641271860633543 0.37772912 0.3017587 prediction 0.461132620316364 Functional Loss - EDNRA ENSG00000151617 UTR5 Human protein_coding chr4:148402398 chr4:148402402 . . 0 25 hm5C_associated_SNPs_74618 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr4:148402401-148402402
64251 chr7 106509047 106509047 1 + G T UCEC 106509044 + 106509024 106509064 41 ACCATCCACGGCAAGGACCACGAGAGTGTGTTCACCGTGTC ACCATCCACGGCAAGGACCACGATAGTGTGTTCACCGTGTC < 41bp 0.926584492518278 0.696018863475799 0.39803198 0.2111541 prediction 0.461131258084959 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509044 chr7:106509047 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_74619 0 0 2 FMR1 POSTAR2 ENCODE chr7:106509031-106509074
64251 chr11 94801254 94801254 1 + G T BLCA 94801252 + 94801232 94801272 41 CTCTTAAGAAAATGATGCATCAGGAAGCAACGTGATGGAGG CTCTTAAGAAAATGATGCATCATGAAGCAACGTGATGGAGG < 41bp 0.730562913121463 0.395445110790798 0.47895128 0.20651439 prediction 0.461125826242925 Functional Loss - SRSF8 ENSG00000180771 ncRNA_exonic Human other chr11:94801252 chr11:94801254 . . 0 23 hm5C_associated_SNPs_74620 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:94801216-94801254
64251 chr19 44589908 44589908 1 + G T CESC 44589906 + 44589886 44589926 41 GTTGGAGTCTGTTCCAGAAACAGGACCACATGAAGAGTGGT GTTGGAGTCTGTTCCAGAAACATGACCACATGAAGAGTGGT < 41bp 0.730562898703781 0.437726624428388 0.43069953 0.081481844 prediction 0.461125797407563 Functional Loss - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44589906 chr19:44589908 stopgain 0.038 0 23 hm5C_associated_SNPs_74621 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44589907-44589922
64251 chr8 104384013 104384013 1 + G A UCEC 104384010 + 104383990 104384030 41 GGGAAGCAAAAGGCGCAGCTCCGGCAGAGGGAGGTGGTGGA GGGAAGCAAAAGGCGCAGCTCCGACAGAGGGAGGTGGTGGA < 41bp 0.730561737282081 0.489030467905521 0.39347196 0.16101378 prediction 0.461123474564163 Functional Loss - CTHRC1 ENSG00000164932 CDS Human protein_coding chr8:104384010 chr8:104384013 synonymous SNV . 0 24 hm5C_associated_SNPs_74622 0 0 1 DDX3X POSTAR2 ENCODE chr8:104383831-104384020
64251 chr20 368883 368883 1 + G A rs61740293 368880 + 368860 368900 41 GGCCCTATGTCCTCCTGGAGCCCGAGGAGGGCGGGCGGGCC GGCCCTATGTCCTCCTGGAGCCCAAGGAGGGCGGGCGGGCC < 41bp 0.784005484316501 0.553452829470366 0.8666035 0.6918104 prediction 0.46110530969227 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:368880 chr20:368883 nonsynonymous SNV 0.029 0 24 hm5C_associated_SNPs_74627 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:368854-368885
64251 chr5 37479969 37479969 1 + A C rs61742643 37479968 + 37479948 37479988 41 GTCATTACAGTATAGTAACACAGGAGACATGATTCTTGTTG GTCATTACAGTATAGTAACACCGGAGACATGATTCTTGTTG < 41bp 0.779681324824494 0.549133827567861 0.7709019 0.2931521 prediction 0.461094994513266 Functional Loss - WDR70 ENSG00000082068 CDS Human protein_coding chr5:37479968 chr5:37479969 synonymous SNV . 0 22 hm5C_associated_SNPs_74631 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:37479940-37479974
64251 chr11 9424896 9424896 1 + G T KIRC 9424894 + 9424874 9424914 41 AGATTACTATGTCGGAACAGCTGGATTTACCTGTGAGACAG AGATTACTATGTCGGAACAGCTTGATTTACCTGTGAGACAG < 41bp 0.883996113801625 0.653449280849999 0.7993535 0.162997 prediction 0.461093665903251 Functional Loss - IPO7 ENSG00000205339 CDS Human protein_coding chr11:9424894 chr11:9424896 synonymous SNV . 0 23 hm5C_associated_SNPs_74632 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:9424856-9424897
64251 chr22 24837367 24837367 1 + G A SKCM 24837364 + 24837344 24837384 41 GGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCATGA GGGAACACGGGCCTCCCAGACGTAGAGCTCCTTAGCCATGA < 41bp 0.774864331646125 0.544321667769689 0.86074907 0.68758035 prediction 0.461085327752871 Functional Loss - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24837364 chr22:24837367 synonymous SNV . 0 24 hm5C_associated_SNPs_74633 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr22:24837363-24837388
64251 chr7 6769501 6769501 1 + G C rs547497669 6769500 + 6769480 6769520 41 GACGAGAATCGCTGAGCCTGCGGGGCTGGACGCTGAGCGCC GACGAGAATCGCTGAGCCTGCCGGGCTGGACGCTGAGCGCC < 41bp 0.856647595725499 0.626105781554151 0.90133065 0.85073346 prediction 0.461083628342697 Functional Loss - ZNF12;PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6769500 chr7:6769501 . . 0 22 hm5C_associated_SNPs_74634 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:6769482-6769506
64251 chr20 10023813 10023813 1 + C T UCEC 10023811 + 10023791 10023831 41 TACCGACTAAGCGGCATTATCGCTGTGCTCTGATCGCCCTT TACCGACTAAGCGGCATTATCGTTGTGCTCTGATCGCCCTT < 41bp 0.730538134778332 0.455002349463472 0.59997994 0.41409713 prediction 0.461076269556663 Functional Loss - ANKEF1 ENSG00000132623 CDS Human protein_coding chr20:10023811 chr20:10023813 synonymous SNV . 0 23 hm5C_associated_SNPs_74636 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:10023780-10023813
64251 chr9 35733117 35733117 1 + G A UCEC 35733114 + 35733094 35733134 41 TGACCACACCTACTCCCTCCCACGGGAAACTGTCTCTATGG TGACCACACCTACTCCCTCCCACAGGAAACTGTCTCTATGG < 41bp 0.783782153033077 0.553244939883679 0.10678339 0.044570327 prediction 0.461074426298796 Functional Loss - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733114 chr9:35733117 nonsynonymous SNV 0.203 0 24 hm5C_associated_SNPs_74637 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35733095-35733232
64251 chr1 38265692 38265692 1 + G A SKCM 38265689 + 38265669 38265709 41 GCGGCCCTGACAGTGAGGCCCGAGATCGTTTCCATTACCTC GCGGCCCTGACAGTGAGGCCCGAAATCGTTTCCATTACCTC < 41bp 0.758115926981992 0.527586986830958 0.060385704 0.052673787 prediction 0.461057880302068 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265689 chr1:38265692 synonymous SNV . 0 24 hm5C_associated_SNPs_74640 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:38265654-38265692
64251 chr15 57524992 57524992 1 + G T SARC 57524990 + 57524970 57525010 41 AGCTTTCATCGCGGCAGTACCAGCAGTTCACCTTACGTTGC AGCTTTCATCGCGGCAGTACCATCAGTTCACCTTACGTTGC < 41bp 0.873015697568467 0.642487491850832 0.5863242 0.18552187 prediction 0.46105641143527 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57524990 chr15:57524992 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_74641 0 0 6 IGF2BP1 POSTAR2 ENCODE chr15:57524964-57525006
64251 chr7 99688875 99688875 1 + A T COAD 99688871 + 99688851 99688891 41 CCCCTTGCAGTGGCTGAACACCTGATAGCACAGCACAGCGC CCCCTTGCAGTGGCTGAACACCTGTTAGCACAGCACAGCGC < 41bp 0.730526485373293 0.400897564526171 0.28462553 0.14202917 prediction 0.461052970746586 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688871 chr7:99688875 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_74644 0 0 4 BUD13 POSTAR2 ENCODE chr7:99688840-99688893
64251 chr7 99688874 99688874 1 + G T COAD 99688871 + 99688851 99688891 41 CCCCTTGCAGTGGCTGAACACCTGATAGCACAGCACAGCGC CCCCTTGCAGTGGCTGAACACCTTATAGCACAGCACAGCGC < 41bp 0.730526485373293 0.330720910898416 0.28462553 0.07555798 prediction 0.461052970746586 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688871 chr7:99688874 synonymous SNV . 0 24 hm5C_associated_SNPs_74645 0 0 4 BUD13 POSTAR2 ENCODE chr7:99688840-99688893
64251 chr17 42153185 42153185 1 + A C rs34491309 42153184 + 42153164 42153204 41 TGCACTCTCCCTGCTATGCCCAGGTGCGTCGGGCACAGCTG TGCACTCTCCCTGCTATGCCCCGGTGCGTCGGGCACAGCTG < 41bp 0.813642616087766 0.583119880844023 0.89294577 0.26927876 prediction 0.461045470487486 Functional Loss - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42153184 chr17:42153185 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_74647 0 0 4 RPS3 POSTAR2 ENCODE chr17:42153092-42153209
64251 chr3 195400700 195400700 1 + C T UCEC 195400698 + 195400678 195400718 41 CCTTTCCACAGGTCCTGAGGCACGGGAATGGCCAGGATCAG CCTTTCCACAGGTCCTGAGGCATGGGAATGGCCAGGATCAG < 41bp 0.730511045210685 0.487470946099706 0.24365312 0.21906188 prediction 0.46102209042137 Functional Loss - SDHAP2 ENSG00000215837;ENSG00000242086 ncRNA_exonic Human other chr3:195400698 chr3:195400700 . . 0 23 hm5C_associated_SNPs_74651 0 0 1 BUD13 POSTAR2 ENCODE chr3:195400696-195400743
64251 chr5 31538694 31538694 1 + T C LIHC 31538693 + 31538673 31538713 41 ATGCCAGACTGCTGCCAGCACTGGGGAAATTCTGGAAATTT ATGCCAGACTGCTGCCAGCACCGGGGAAATTCTGGAAATTT < 41bp 0.743768681726984 0.513258535264778 0.3993753 0.89585197 prediction 0.46102029292441 Functional Loss - C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31538693 chr5:31538694 synonymous SNV . 0 22 hm5C_associated_SNPs_74652 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:31538666-31538698
64251 chr12 1613442 1613442 1 + G A rs11061789 1613439 + 1613419 1613459 41 CCAGGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAAT CCAGGATAATCTCATGAGAGCACAGATGCTTTGCCCAGAAT < 41bp 0.732501309765381 0.501991292579113 0.21834052 0.14211631 prediction 0.461020034372535 Functional Loss - LINC00942 ENSG00000249628 ncRNA_intronic Human lincRNA chr12:1613439 chr12:1613442 . . 0 24 hm5C_associated_SNPs_74653 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:1613440-1613460
64251 chr4 38091583 38091583 1 + G A UCEC 38091580 + 38091560 38091600 41 AGAGCTGGGAGAGCTTCCCCCACGATCTCCTTTAGAACCAG AGAGCTGGGAGAGCTTCCCCCACAATCTCCTTTAGAACCAG < 41bp 0.759588993097761 0.529079529643308 0.40556985 0.2632228 prediction 0.461018926908906 Functional Loss - TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38091580 chr4:38091583 nonsynonymous SNV 0.971 3 24 hm5C_associated_SNPs_74654 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr4:38091564-38091585
64251 chr19 58117677 58117677 1 + G A rs9676259 58117674 + 58117654 58117694 41 TTCTTCGACACAGGAAAGCACACGGTAGAACAAGGACTCAT TTCTTCGACACAGGAAAGCACACAGTAGAACAAGGACTCAT < 41bp 0.751250712224355 0.520741837522839 0.35030234 0.26391047 prediction 0.461017749403032 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117674 chr19:58117677 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_74655 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:58117663-58117700
64251 chr22 50615792 50615792 1 + C T STAD 50615790 + 50615770 50615810 41 TCGAGAAGTACCTGGAGCGCCGCGGCCGCAGCAACTTCCTG TCGAGAAGTACCTGGAGCGCCGTGGCCGCAGCAACTTCCTG < 41bp 0.730507054336585 0.481593612899958 0.61202633 0.6459584 prediction 0.461014108673169 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615790 chr22:50615792 synonymous SNV . 0 23 hm5C_associated_SNPs_74656 0 0 1 UCHL5 POSTAR2 ENCODE chr22:50615737-50615861
64251 chr6 158454626 158454626 1 + G A COAD 158454623 + 158454603 158454643 41 CCAAGGCCTGCCTCGTCTCTCGCGTTAGCTGTGAGCGCACA CCAAGGCCTGCCTCGTCTCTCGCATTAGCTGTGAGCGCACA < 41bp 0.750436928971368 0.519937100107301 0.4960706 0.34075215 prediction 0.460999657728135 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158454623 chr6:158454626 nonsynonymous SNV 0.742 0 24 hm5C_associated_SNPs_74659 0 0 1 PPIG POSTAR2 ENCODE chr6:158454574-158454632
64251 chr17 79954329 79954329 1 + G T UCEC 79954326 + 79954306 79954346 41 AAGTGCTACGACCCCGTGGGCAAGACCCCAGGAAGCCTGGG AAGTGCTACGACCCCGTGGGCAATACCCCAGGAAGCCTGGG < 41bp 0.730499559556917 0.331357614669954 0.44281435 0.2165358 prediction 0.460999119113833 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79954326 chr17:79954329 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_74660 0 0 3 PPIG POSTAR2 ENCODE chr17:79954295-79954393
64251 chr20 61451327 61451327 1 + G A SKCM 61451324 + 61451304 61451344 41 CCCTGGACCCAAGGGTGCCCCTGGGGAACGGGTAAGTGCCT CCCTGGACCCAAGGGTGCCCCTGAGGAACGGGTAAGTGCCT < 41bp 0.765176683085734 0.534678021309403 0.24250326 0.12565815 prediction 0.460997323552663 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61451324 chr20:61451327 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_74661 0 0 11 EFTUD2 POSTAR2 ENCODE chr20:61451255-61451336
64251 chr19 41239168 41239168 1 + G A BLCA 41239165 + 41239145 41239185 41 TGGACCCTGGGGCCCCTACCCCTGAGGAGCATGCCCAGGGT TGGACCCTGGGGCCCCTACCCCTAAGGAGCATGCCCAGGGT < 41bp 0.779954806193827 0.549457803947667 0.34136444 0.27673528 prediction 0.46099400449232 Functional Loss - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239165 chr19:41239168 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_74662 0 0 3 LIN28B POSTAR2 ENCODE chr19:41239156-41239212
64251 chr19 38643532 38643532 1 + G A LUSC 38643529 + 38643509 38643549 41 CTCTTGATCCCCACTTCAGCCACGATGGGACGTCCAGCGGC CTCTTGATCCCCACTTCAGCCACAATGGGACGTCCAGCGGC < 41bp 0.770724835010686 0.540236850179733 0.19584599 0.20904812 prediction 0.460975969661906 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38643529 chr19:38643532 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_74668 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr19:38643504-38643535
64251 chr10 5959443 5959443 1 + G C BLCA 5959439 + 5959419 5959459 41 ATGCGGAAGCTGGGGGAGTGCACAGAAGAGGCGCACCAGAT ATGCGGAAGCTGGGGGAGTGCACACAAGAGGCGCACCAGAT < 41bp 0.730487391329191 0.432560094623233 0.6663481 0.305239 prediction 0.460974782658383 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5959439 chr10:5959443 nonsynonymous SNV 0.698 2 25 hm5C_associated_SNPs_74670 0 0 5 BUD13 POSTAR2 ENCODE chr10:5959387-5959448
64251 chr8 9635090 9635090 1 + G A rs1567834 9635087 + 9635067 9635107 41 GTACTGGAGATGCAGGTTGACACGGGCTTGAGTTCCAAGGT GTACTGGAGATGCAGGTTGACACAGGCTTGAGTTCCAAGGT < 41bp 0.742223143689409 0.511741670624616 0.8892164 0.8189666 prediction 0.460962946129587 Functional Loss - TNKS ENSG00000173273 UTR3 Human protein_coding chr8:9635087 chr8:9635090 . . 0 24 hm5C_associated_SNPs_74677 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:9635050-9635100
64251 chr1 233514958 233514958 1 + G A SKCM 233514955 + 233514935 233514975 41 TCCTTCTGGCATCGGTGGCTCTGGGACTGGACCTCAGAGAG TCCTTCTGGCATCGGTGGCTCTGAGACTGGACCTCAGAGAG < 41bp 0.7304800528019 0.475588637346691 0.5696415 0.34623185 prediction 0.460960105603799 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233514955 chr1:233514958 nonsynonymous SNV 0.301 4 24 hm5C_associated_SNPs_74679 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:233514906-233514969
64251 chr1 65211041 65211041 1 + G T SARC 65211039 + 65211019 65211059 41 CCGCGCGACTGCAGCGGATGCAGCGGGAGCTGAGCAACCGC CCGCGCGACTGCAGCGGATGCATCGGGAGCTGAGCAACCGC < 41bp 0.90530311174985 0.67483429579413 0.85128707 0.52024555 prediction 0.460937631911439 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65211039 chr1:65211041 nonsynonymous SNV 0.939 1 23 hm5C_associated_SNPs_74682 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:65210970-65211075
64251 chr21 44180449 44180449 1 + C T UCEC 44180447 + 44180427 44180467 41 GCCTCCCGCAGTTCTGCGTCCACGACAACTACAGAAACAAC GCCTCCCGCAGTTCTGCGTCCATGACAACTACAGAAACAAC < 41bp 0.765551983966831 0.535085255845985 0.093426645 0.10422298 prediction 0.460933456241692 Functional Loss - PDE9A ENSG00000160191 CDS Human protein_coding chr21:44180447 chr21:44180449 synonymous SNV . 0 23 hm5C_associated_SNPs_74684 0 0 1 TBRG4 POSTAR2 ENCODE chr21:44180437-44180462
64251 chr1 41483426 41483426 1 + G A STAD 41483423 + 41483403 41483443 41 GGAGTCCACCAGCAGGCGTGCGCGGTCCTCGTCACGGTGGC GGAGTCCACCAGCAGGCGTGCGCAGTCCTCGTCACGGTGGC < 41bp 0.778424747934194 0.547959671238696 0.86731935 0.796504 prediction 0.460930153390996 Functional Loss - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483423 chr1:41483426 nonsynonymous SNV 0.006 3 24 hm5C_associated_SNPs_74685 0 0 2 NONO POSTAR2 ENCODE chr1:41483385-41483436
64251 chr19 10823297 10823297 1 + G A GBM 10823294 + 10823274 10823314 41 GTTCGACTGCGTCTTCCCCACACGGACAGCGGTGAGGCTCT GTTCGACTGCGTCTTCCCCACACAGACAGCGGTGAGGCTCT < 41bp 0.77110858052944 0.540650973740877 0.3362664 0.04926294 prediction 0.460915213577126 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823294 chr19:10823297 nonsynonymous SNV 0.929 3 24 hm5C_associated_SNPs_74689 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823272-10823303
64251 chr19 19612078 19612078 1 + G A SKCM 19612075 + 19612055 19612095 41 ACCAACCAGAAGAAGGCGCTCAAGGTGGAGCACACCAGCCG ACCAACCAGAAGAAGGCGCTCAAAGTGGAGCACACCAGCCG < 41bp 0.762716000769572 0.532258598398361 0.8633833 0.4342853 prediction 0.460914804742422 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19612075 chr19:19612078 synonymous SNV . 0 24 hm5C_associated_SNPs_74690 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:19612018-19612079
64251 chr10 25312256 25312256 1 + G T COAD 25312253 + 25312233 25312273 41 ACATGCACAGCGATTTCTTTCAAGAACCTTTGCACTTGCGG ACATGCACAGCGATTTCTTTCAATAACCTTTGCACTTGCGG < 41bp 0.730454552746942 0.352491167861313 0.817032 0.3032251 prediction 0.460909105493885 Functional Loss - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312253 chr10:25312256 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_74691 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:25312228-25312264
64251 chr6 33371530 33371530 1 + G A CESC 33371527 + 33371507 33371547 41 ATCAGGTGTTCCTCCCATGGCAGGAGGGAAGAAACCCAGCA ATCAGGTGTTCCTCCCATGGCAGAAGGGAAGAAACCCAGCA < 41bp 0.745001665548234 0.514561146009053 0.632128 0.35345972 prediction 0.460881039078363 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33371527 chr6:33371530 nonsynonymous SNV 0.133 0 24 hm5C_associated_SNPs_74700 0 0 8 BUD13 POSTAR2 ENCODE chr6:33371495-33371561
64251 chr16 847846 847846 1 + G A rs371911391 847843 + 847823 847863 41 CCCTGTGGCCCCGCAGGGGACACGGCCCCGGAGCAGGACTC CCCTGTGGCCCCGCAGGGGACACAGCCCCGGAGCAGGACTC < 41bp 0.753226583454537 0.522787656783317 0.46680418 0.31294468 prediction 0.46087785334244 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847843 chr16:847846 synonymous SNV . 0 24 hm5C_associated_SNPs_74704 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:847840-847860
64251 chr16 67917910 67917910 1 + G T LUAD 67917908 + 67917888 67917928 41 ACCACAGTGACCCCATCACTCGGGACCACATGGGCTCCGTT ACCACAGTGACCCCATCACTCGTGACCACATGGGCTCCGTT < 41bp 0.899240259960007 0.668804004539015 0.9335903 0.8151977 prediction 0.460872510841983 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917908 chr16:67917910 synonymous SNV . 0 23 hm5C_associated_SNPs_74707 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67917869-67917927
64251 chr1 229771022 229771022 1 + G T SARC 229771019 + 229770999 229771039 41 TGGGGGCACATGGACGCAGGCTGGCCAGGGCCAGCTGAGGC TGGGGGCACATGGACGCAGGCTGTCCAGGGCCAGCTGAGGC < 41bp 0.73043609877897 0.331066359265048 0.10972875 0.07886976 prediction 0.46087219755794 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771019 chr1:229771022 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_74708 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229770991-229771032
64251 chr12 31254815 31254815 1 + G T GBM 31254813 + 31254793 31254833 41 TAACCTGTGCGGTGTGGTTCCTGGAGGGGTGGTCTGTTTCT TAACCTGTGCGGTGTGGTTCCTTGAGGGGTGGTCTGTTTCT < 41bp 0.887262615669085 0.656827211272848 0.72783375 0.28260535 prediction 0.460870808792473 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31254813 chr12:31254815 stopgain 0.087 1 23 hm5C_associated_SNPs_74709 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:31254782-31254843
64251 chr20 61340658 61340658 1 + G A STAD 61340655 + 61340635 61340675 41 CTGGAGGAGGCGCTGCTGGCCCCGGGCTTCGGCAACGCTTC CTGGAGGAGGCGCTGCTGGCCCCAGGCTTCGGCAACGCTTC < 41bp 0.772152961978154 0.54173560391475 0.19243449 0.09188196 prediction 0.460834716126807 Functional Loss - NTSR1 ENSG00000101188 CDS Human protein_coding chr20:61340655 chr20:61340658 synonymous SNV . 0 24 hm5C_associated_SNPs_74717 0 0 2 SSB POSTAR2 GSE95683,GSM2521600 chr20:61340640-61340660
64251 chr1 90475793 90475793 1 + G T UCEC 90475790 + 90475770 90475810 41 AAGCCCAGTGGAACCTTTATCAAGAAACCCAAACTAGCAAA AAGCCCAGTGGAACCTTTATCAATAAACCCAAACTAGCAAA < 41bp 0.905516514254522 0.675099745774561 0.49837962 0.1205996 prediction 0.460833536959923 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90475790 chr1:90475793 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_74718 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:90475766-90475794
64251 chr18 56819825 56819825 1 + G T LUSC 56819822 + 56819802 56819842 41 CTCCTGTTCCTCACAAATTTCCGGGAAGACCCAATCAGAGC CTCCTGTTCCTCACAAATTTCCGTGAAGACCCAATCAGAGC < 41bp 0.730414842768321 0.33691620441852 0.32308757 0.16591111 prediction 0.460829685536642 Functional Loss - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56819822 chr18:56819825 synonymous SNV . 0 24 hm5C_associated_SNPs_74721 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:56819798-56819831
64251 chr18 56819824 56819824 1 + G T SARC 56819822 + 56819802 56819842 41 CTCCTGTTCCTCACAAATTTCCGGGAAGACCCAATCAGAGC CTCCTGTTCCTCACAAATTTCCTGGAAGACCCAATCAGAGC < 41bp 0.730414842768321 0.387441626434593 0.32308757 0.06975263 prediction 0.460829685536642 Functional Loss - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56819822 chr18:56819824 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_74722 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:56819798-56819831
64251 chr1 229770844 229770844 1 + G A BLCA 229770841 + 229770821 229770861 41 GCTGGTCGGCCTGCAGGCAGCCCGAAGGAGCTGTGGTAGCC GCTGGTCGGCCTGCAGGCAGCCCAAAGGAGCTGTGGTAGCC < 41bp 0.759882889500408 0.529476058144841 0.23593608 0.35332495 prediction 0.460813662711134 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770841 chr1:229770844 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_74723 0 0 2 RBM15 POSTAR2 ENCODE chr1:229770813-229770861
64251 chr1 110168842 110168842 1 + G A COAD 110168839 + 110168819 110168859 41 TTCCTGAAGACGGACAGTGACTCGGACCTACAGTGAGGAGG TTCCTGAAGACGGACAGTGACTCAGACCTACAGTGAGGAGG < 41bp 0.730406701005363 0.495028226098181 0.1935344 0.22702482 prediction 0.460813402010726 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168839 chr1:110168842 synonymous SNV . 0 24 hm5C_associated_SNPs_74724 0 0 6 DDX24 POSTAR2 ENCODE chr1:110168816-110168851
64251 chr17 6920597 6920597 1 + G A SKCM 6920594 + 6920574 6920614 41 AGACAGCCTGACCCTGGATTCTGGCCTTCTCATGACCTCTG AGACAGCCTGACCCTGGATTCTGACCTTCTCATGACCTCTG < 41bp 0.732981743173708 0.502580084323345 0.079215765 0.06359869 prediction 0.460803317700726 Functional Loss - C17orf49 ENSG00000161939;ENSG00000258315 CDS Human other chr17:6920594 chr17:6920597 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_74727 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:6920583-6920615
64251 chrX 65418856 65418856 1 + C T GBM 65418854 + 65418834 65418874 41 GATATTGAGGGCTTCCAAGACTCCAATCGGATGCATGGTAT GATATTGAGGGCTTCCAAGACTTCAATCGGATGCATGGTAT < 41bp 0.730398340056024 0.424528510741336 0.94530594 0.40415263 prediction 0.460796680112049 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65418854 chrX:65418856 nonsynonymous SNV 0.894 5 23 hm5C_associated_SNPs_74729 0 0 2 GPKOW POSTAR2 ENCODE chrX:65418852-65418907
64251 chr17 1936810 1936810 1 + C T HNSC 1936808 + 1936788 1936828 41 ATCCATTCTAGGTCGGGCCCCTCGGGGCCGCGTGGCCAATC ATCCATTCTAGGTCGGGCCCCTTGGGGCCGCGTGGCCAATC < 41bp 0.730398141254774 0.471204467308827 0.26794463 0.27828455 prediction 0.460796282509548 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1936808 chr17:1936810 nonsynonymous SNV 0.036 3 23 hm5C_associated_SNPs_74730 0 0 1 NCBP2 POSTAR2 ENCODE chr17:1936796-1936873
64251 chr3 100467319 100467319 1 + C T COAD 100467317 + 100467297 100467337 41 AAGTGGGCCTAATCCTTATGCGCGTAACCGTCCTCCCTTTG AAGTGGGCCTAATCCTTATGCGTGTAACCGTCCTCCCTTTG < 41bp 0.806404640452398 0.576010375630217 0.4672092 0.5668957 prediction 0.460788529644362 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100467317 chr3:100467319 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_74733 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:100467240-100467320
64251 chr17 80680718 80680718 1 + C T HNSC 80680716 + 80680696 80680736 41 GGAGGAACGGCCCTTTGTGGCCCGGTTTGGATTTGACGTGG GGAGGAACGGCCCTTTGTGGCCTGGTTTGGATTTGACGTGG < 41bp 0.814933551443171 0.584547414821688 0.054112196 0.08747691 prediction 0.460772273242964 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680716 chr17:80680718 nonsynonymous SNV 0.373 3 23 hm5C_associated_SNPs_74742 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80680700-80680736
64251 chr12 123332640 123332640 1 + G T UCEC 123332638 + 123332618 123332658 41 CCGTGAAGGAGAAGCACGCCCGGCGTATCCTTGGCCGGCTC CCGTGAAGGAGAAGCACGCCCGTCGTATCCTTGGCCGGCTC < 41bp 0.73037816433212 0.378706435150386 0.84077716 0.35078728 prediction 0.460756328664239 Functional Loss - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123332638 chr12:123332640 synonymous SNV . 0 23 hm5C_associated_SNPs_74745 0 0 1 BUD13 POSTAR2 ENCODE chr12:123332568-123332640
64251 chr13 28006937 28006937 1 + C T UCEC 28006935 + 28006915 28006955 41 TGAAACGACATGCCAAGGCCCACGAGGGTGTGTACGGATAG TGAAACGACATGCCAAGGCCCATGAGGGTGTGTACGGATAG < 41bp 0.817570987740487 0.587203466544764 0.26658767 0.20297164 prediction 0.460735042391447 Functional Loss - GTF3A ENSG00000122034 CDS Human protein_coding chr13:28006935 chr13:28006937 synonymous SNV . 0 23 hm5C_associated_SNPs_74751 0 0 4 GRWD1 POSTAR2 ENCODE chr13:28006867-28006939
64251 chr1 15944203 15944203 1 + C T UCEC 15944201 + 15944181 15944221 41 TACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCT TACTGTGTGCGGAGGGACCTCTTCGAGGTGACCTTTTCCCT < 41bp 0.804630418248537 0.574263150223347 0.22149503 0.18787524 prediction 0.46073453605038 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15944201 chr1:15944203 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_74752 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:15944181-15944213
64251 chr20 43057083 43057083 1 + G T UCEC 43057081 + 43057061 43057101 41 AACACAATGCCCACTCACCTCAGCAACGGACAGATGTGTGA AACACAATGCCCACTCACCTCATCAACGGACAGATGTGTGA < 41bp 0.730365054198707 0.39015291703834 0.2706105 0.15365279 prediction 0.460730108397413 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43057081 chr20:43057083 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_74754 0 0 2 GRWD1 POSTAR2 ENCODE chr20:43057011-43057085
64251 chr3 10284151 10284151 1 + G A rs562943497 10284148 + 10284128 10284168 41 CTGGGCTTTGTTAGTCAGAGCAGGGGATCAGAGGAGACTGA CTGGGCTTTGTTAGTCAGAGCAGAGGATCAGAGGAGACTGA < 41bp 0.755005603579814 0.524642348975512 0.92572415 0.9106638 prediction 0.460726509208605 Functional Loss - IRAK2 ENSG00000134070 UTR3 Human protein_coding chr3:10284148 chr3:10284151 . . 0 24 hm5C_associated_SNPs_74756 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10284143-10284162
64251 chr8 94935526 94935526 1 + G T LIHC 94935524 + 94935504 94935544 41 TAAGGCCACAGGATAAGTTTCTGGTGTTGGCTACTGATGGG TAAGGCCACAGGATAAGTTTCTTGTGTTGGCTACTGATGGG < 41bp 0.730362148124476 0.393891615327578 0.35821235 0.14198738 prediction 0.460724296248951 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935524 chr8:94935526 synonymous SNV . 0 23 hm5C_associated_SNPs_74757 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr8:94935520-94935540
64251 chr17 46128750 46128750 1 + G T UCEC 46128748 + 46128728 46128768 41 TCCTCAGTCAGGTGAGGGCCCTGGACAGGTTCCAGGTGCCA TCCTCAGTCAGGTGAGGGCCCTTGACAGGTTCCAGGTGCCA < 41bp 0.73035342378983 0.387004274864241 0.43751144 0.19693005 prediction 0.46070684757966 Functional Loss - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128748 chr17:46128750 synonymous SNV . 0 23 hm5C_associated_SNPs_74761 0 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:46128660-46128760
64251 chr4 144434889 144434889 1 + A C rs147870798 144434885 + 144434865 144434905 41 CCTAGAGCCCCGCGGAAGAGCAGAACGTTTGGGAGTGTGCA CCTAGAGCCCCGCGGAAGAGCAGACCGTTTGGGAGTGTGCA < 41bp 0.730347933152717 0.419703155885219 0.3078255 0.2554469 prediction 0.460695866305435 Functional Loss - SMARCA5-AS1 ENSG00000245112 ncRNA_exonic Human antisense chr4:144434885 chr4:144434889 . . 0 25 hm5C_associated_SNPs_74763 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr4:144434869-144434897
64251 chr7 56045863 56045863 1 + T C HNSC 56045862 + 56045842 56045882 41 GATCTCGAGAAGACAGCTGGCTAAAATCCTTATTTGTCCGG GATCTCGAGAAGACAGCTGGCCAAAATCCTTATTTGTCCGG < 41bp 0.730342650912876 0.48114433990268 0.24812761 0.23749375 prediction 0.460685301825752 Functional Loss - NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56045862 chr7:56045863 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_74767 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:56045820-56045880
64251 chr19 1079932 1079932 1 + G A SKCM 1079929 + 1079909 1079949 41 CTCCGGTGCCGCCCGCAGGCCACGATCTCCTACTACCAGAT CTCCGGTGCCGCCCGCAGGCCACAATCTCCTACTACCAGAT < 41bp 0.73034175133179 0.482960973566615 0.09154263 0.05722457 prediction 0.460683502663581 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1079929 chr19:1079932 synonymous SNV . 0 24 hm5C_associated_SNPs_74768 0 0 3 DDX24 POSTAR2 ENCODE chr19:1079928-1079960
64251 chr20 1918401 1918401 1 + C T rs111565548 1918399 + 1918379 1918419 41 TCCAGCACTTCCTGGGCAGCCACGGCCCCCTCCCCCCACAT TCCAGCACTTCCTGGGCAGCCATGGCCCCCTCCCCCCACAT < 41bp 0.740514873087736 0.510175383074895 0.25582647 0.15723214 prediction 0.460678980025681 Functional Loss - SIRPA ENSG00000198053 UTR3 Human protein_coding chr20:1918399 chr20:1918401 . . 0 23 hm5C_associated_SNPs_74770 0 0 1 PCBP2 POSTAR2 ENCODE chr20:1918361-1918418
64251 chr17 41585854 41585854 1 + G A UCEC 41585851 + 41585831 41585871 41 TCTTCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTC TCTTCCCAGTGAGATGCAGACCCAAATCTTTGACCCAGCTC < 41bp 0.740889760741265 0.510552451601889 0.43527824 0.25636375 prediction 0.460674618278752 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585851 chr17:41585854 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_74771 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:41585837-41585875
64251 chr8 123965484 123965484 1 + G A rs34092125 123965481 + 123965461 123965501 41 AGAGAGATCGACTCCTGGTTCTCGGAGAGGCGGAAGCTTCG AGAGAGATCGACTCCTGGTTCTCAGAGAGGCGGAAGCTTCG < 41bp 0.73033521720692 0.488411179660752 0.29587203 0.08256844 prediction 0.460670434413839 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965481 chr8:123965484 synonymous SNV . 0 24 hm5C_associated_SNPs_74772 0 0 1 SLTM POSTAR2 ENCODE chr8:123965440-123965492
64251 chr17 34956148 34956148 1 + G A STAD 34956145 + 34956125 34956165 41 CACAATTCGCCTTCAAACTCCACGACAAGGACCCTGAGAAG CACAATTCGCCTTCAAACTCCACAACAAGGACCCTGAGAAG < 41bp 0.766616991994367 0.536285899261043 0.039254278 0.019067168 prediction 0.460662185466648 Functional Loss - DHRS11 ENSG00000108272 CDS Human other chr17:34956145 chr17:34956148 nonsynonymous SNV 0.947 1 24 hm5C_associated_SNPs_74774 0 0 1 PPIG POSTAR2 ENCODE chr17:34956083-34956179
64251 chr6 155131253 155131253 1 + G A UCEC 155131250 + 155131230 155131270 41 AGAAAGAAAGAGGAAATCATCACGGTCGTATTCAAGTGAAA AGAAAGAAAGAGGAAATCATCACAGTCGTATTCAAGTGAAA < 41bp 0.753916034668417 0.523593718850496 0.5278088 0.3028307 prediction 0.460644631635842 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155131250 chr6:155131253 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_74778 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:155131240-155131260
64251 chr11 122774741 122774741 1 + G A PAAD 122774738 + 122774718 122774758 41 GTGGAAGCGTTGCCGGAGTCCACGGACAGCTCTTTAGAAAA GTGGAAGCGTTGCCGGAGTCCACAGACAGCTCTTTAGAAAA < 41bp 0.772067917984756 0.541759351964707 0.83003044 0.23195457 prediction 0.460617132040098 Functional Loss - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122774738 chr11:122774741 synonymous SNV . 0 24 hm5C_associated_SNPs_74790 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:122774727-122774756
64251 chr7 99217449 99217449 1 + G A PRAD 99217446 + 99217426 99217466 41 TCTGTCGTCGGTGGCTGAGGCCCGAGTTGCACACCAAGGAG TCTGTCGTCGGTGGCTGAGGCCCAAGTTGCACACCAAGGAG < 41bp 0.759770213950159 0.5294627386789 0.8513255 0.484325 prediction 0.460614950542518 Functional Loss - ZSCAN25 ENSG00000197037 CDS Human protein_coding chr7:99217446 chr7:99217449 nonsynonymous SNV 0.260 4 24 hm5C_associated_SNPs_74791 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:99217427-99217452
64251 chr1 36319147 36319147 1 + G A COAD 36319144 + 36319124 36319164 41 AGAGCAACGGCCGGGATCCTCAGGCCTTGGCTAAGGCTGTG AGAGCAACGGCCGGGATCCTCAGACCTTGGCTAAGGCTGTG < 41bp 0.732878147789118 0.502575267257413 0.8988426 0.86062455 prediction 0.46060576106341 Functional Loss - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36319144 chr1:36319147 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_74793 0 0 3 U2AF2 POSTAR2 ENCODE chr1:36319069-36319155
64251 chr22 50962514 50962514 1 - G A rs75485962 50962516 - 50962496 50962536 41 GCGACTTCCACCTGCTGGATCACAGAGGCCGGGCTCGCTGC GCGACTTCCACCTGCTGGATCATAGAGGCCGGGCTCGCTGC < 41bp 0.758319945609576 0.528019853953132 0.27265137 0.340423 prediction 0.46060018331289 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962516 chr22:50962514 synonymous SNV . 0 23 hm5C_associated_SNPs_74795 4 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50962466-50962518
64251 chr16 28990484 28990484 1 + G A UCEC 28990481 + 28990461 28990501 41 GGTCTCTCTCCCCAGCATTTCTGGCTGCTCCTCCTGACCCG GGTCTCTCTCCCCAGCATTTCTGACTGCTCCTCCTGACCCG < 41bp 0.793953307461877 0.563653478994041 0.722492 0.3038811 prediction 0.460599656935671 Functional Loss - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28990481 chr16:28990484 stopgain 0.998 1 24 hm5C_associated_SNPs_74796 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:28990475-28990502
64251 chr5 135391445 135391445 1 + G T LUAD 135391443 + 135391423 135391463 41 GGGACCCTGTTCACGATGGACCGGGTGCTGACCCCCCCAAT GGGACCCTGTTCACGATGGACCTGGTGCTGACCCCCCCAAT < 41bp 0.730293525723679 0.37301129924831 0.9002203 0.41659984 prediction 0.460587051447358 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135391443 chr5:135391445 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_74805 0 0 7 LARP4 POSTAR2 ENCODE chr5:135391442-135391467
64251 chr6 41751245 41751245 1 + G A UCEC 41751242 + 41751222 41751262 41 AGAACTCTGGCTGGCCCCACCAAGAAGACAGCCCCAAGCCC AGAACTCTGGCTGGCCCCACCAAAAAGACAGCCCCAAGCCC < 41bp 0.799638396703558 0.56934736465629 0.25389922 0.07369223 prediction 0.460582064094536 Functional Loss - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41751242 chr6:41751245 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_74807 0 0 1 BUD13 POSTAR2 ENCODE chr6:41751210-41751285
64251 chr22 21237835 21237835 1 + C T CESC 21237833 + 21237813 21237853 41 ACCCACACCTTCGAGCCTATCACCAGAAGATCGACAGCAAC ACCCACACCTTCGAGCCTATCATCAGAAGATCGACAGCAAC < 41bp 0.851003328430183 0.620713946968621 0.17765161 0.14263767 prediction 0.460578762923124 Functional Loss - SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21237833 chr22:21237835 synonymous SNV . 0 23 hm5C_associated_SNPs_74808 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:21237817-21237851
64251 chr2 54853190 54853190 1 + T C LAML 54853189 + 54853169 54853209 41 TGGTAGCCGTGGCCAGGGAGCTCGAGGCCGAGAATTACCAC TGGTAGCCGTGGCCAGGGAGCCCGAGGCCGAGAATTACCAC < 41bp 0.800655413775448 0.570370264403015 0.74571913 0.8053707 prediction 0.460570298744866 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54853189 chr2:54853190 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_74811 0 0 12 LIN28A POSTAR2 GSE39873,GSM980593 chr2:54853160-54853220
64251 chr10 112340727 112340727 1 + T C COAD 112340726 + 112340706 112340746 41 ATTAAGAGAAGTAGCTGGTACTAGAGTGTATGACGAACGAA ATTAAGAGAAGTAGCTGGTACCAGAGTGTATGACGAACGAA < 41bp 0.769276794921868 0.538993574503406 0.29063076 0.77882385 prediction 0.460566440836923 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112340726 chr10:112340727 synonymous SNV . 0 22 hm5C_associated_SNPs_74812 0 0 16 SRRM4 POSTAR2 GSE57278,GSM1378374 chr10:112340700-112340740
64251 chr7 5340191 5340191 1 + T C LIHC 5340190 + 5340170 5340210 41 CTCCGTCACCCCGCCTGGCCCTGCATCTTCTCACTGCTCAT CTCCGTCACCCCGCCTGGCCCCGCATCTTCTCACTGCTCAT < 41bp 0.730277693006399 0.469346012079216 0.100783795 0.042929888 prediction 0.460555386012797 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5340190 chr7:5340191 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_74814 0 0 1 PCBP2 POSTAR2 ENCODE chr7:5340104-5340217
64251 chr10 38654418 38654418 1 + G A GBM 38654415 + 38654395 38654435 41 GACAATCCATCTCAGCTCATCTGGACATCATCTCGCAATGC GACAATCCATCTCAGCTCATCTGAACATCATCTCGCAATGC < 41bp 0.735809783972309 0.505537640728503 0.061829656 0.025867075 prediction 0.460544286487612 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654415 chr10:38654418 . . 0 24 hm5C_associated_SNPs_74819 0 0 1 GRWD1 POSTAR2 ENCODE chr10:38654399-38654460
64251 chr4 6865466 6865466 1 + A T UCEC 6865462 + 6865442 6865482 41 TTCTGCATCCGAACTGTCCCCAGGAGGAGGAAGCGAGTCAG TTCTGCATCCGAACTGTCCCCAGGTGGAGGAAGCGAGTCAG < 41bp 0.871204040477616 0.640932342830227 0.89619815 0.891008 prediction 0.460543395294778 Functional Loss - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6865462 chr4:6865466 synonymous SNV . 0 25 hm5C_associated_SNPs_74820 0 0 1 RBM15 POSTAR2 ENCODE chr4:6865412-6865490
64251 chr11 34118200 34118200 1 + G C COAD 34118196 + 34118176 34118216 41 GAGGCTTGATGAATGGATACCGGGGCCCTGCCAATGGATTC GAGGCTTGATGAATGGATACCGGGCCCCTGCCAATGGATTC < 41bp 0.730268745269579 0.444371093961021 0.8377975 0.15022331 prediction 0.460537490539157 Functional Loss - CAPRIN1 ENSG00000135387 CDS Human protein_coding chr11:34118196 chr11:34118200 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_74823 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr11:34118126-34118213
64251 chr14 56755201 56755201 1 + C T UCEC 56755199 + 56755179 56755219 41 ATCGACTTCGTTGTCACAGACACGATTTCTGGCAGCCAGAA ATCGACTTCGTTGTCACAGACATGATTTCTGGCAGCCAGAA < 41bp 0.855783446886709 0.625517993626113 0.02406913 0.06326741 prediction 0.460530906521191 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56755199 chr14:56755201 nonsynonymous SNV 0.504 4 23 hm5C_associated_SNPs_74828 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr14:56755197-56755209
64251 chr9 140136391 140136391 1 + C T UCEC 140136389 + 140136369 140136409 41 AGTACGTGCCCCGCGCCGTGCTCGTGGATCTGGAGCCCGGC AGTACGTGCCCCGCGCCGTGCTTGTGGATCTGGAGCCCGGC < 41bp 0.751240844220321 0.520982426353182 0.11007592 0.08550376 prediction 0.460516835734278 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140136389 chr9:140136391 synonymous SNV . 0 23 hm5C_associated_SNPs_74830 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:140136360-140136400
64251 chr6 117890851 117890851 1 - C A LUAD 117890854 - 117890834 117890874 41 TCCTCATCTCTGAGATCCATCCGGGGCAACCTGCTGATAGA TCCTCATCTCTGAGATCCATCCGTGGCAACCTGCTGATAGA < 41bp 0.730248931261454 0.333614888398774 0.9484496 0.27186057 prediction 0.460497862522908 Functional Loss - GOPC ENSG00000047932 CDS Human protein_coding chr6:117890854 chr6:117890851 nonsynonymous SNV 0.600 4 24 hm5C_associated_SNPs_74835 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:117890822-117890863
64251 chr2 177016484 177016484 1 + G A CESC 177016481 + 177016461 177016501 41 GCCGACTACTACGGCGGCGGCGCGCAGGGCGCAGACTTCCA GCCGACTACTACGGCGGCGGCGCACAGGGCGCAGACTTCCA < 41bp 0.757294800731091 0.527049212665698 0.85776526 0.67360836 prediction 0.460491176130785 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016481 chr2:177016484 synonymous SNV . 0 24 hm5C_associated_SNPs_74838 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:177016480-177016500
64251 chr3 50655078 50655078 1 + C T GBM 50655076 + 50655056 50655096 41 CGGACCCGGCTTGGGCGGTGCTCCGGGGGGGCGGCGGGAGC CGGACCCGGCTTGGGCGGTGCTTCGGGGGGGCGGCGGGAGC < 41bp 0.813399440175178 0.583160436064914 0.8988018 0.9058577 prediction 0.460478008220527 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50655076 chr3:50655078 nonsynonymous SNV 0.027 0 23 hm5C_associated_SNPs_74843 0 0 2 DDX55 POSTAR2 ENCODE chr3:50655005-50655141
64251 chr20 62374241 62374241 1 + C T CESC 62374239 + 62374219 62374259 41 ACCCCCCGCACAGGAAGCCCCGCGGCGACGCGAAGAAGTGC ACCCCCCGCACAGGAAGCCCCGTGGCGACGCGAAGAAGTGC < 41bp 0.778008351164166 0.547771750158752 0.5249764 0.32378986 prediction 0.460473202010828 Functional Loss - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62374239 chr20:62374241 synonymous SNV . 0 23 hm5C_associated_SNPs_74845 0 0 4 BUD13 POSTAR2 ENCODE chr20:62374232-62374246
64251 chr12 6499942 6499942 1 + G A LGG 6499939 + 6499919 6499959 41 CTGGAGACCTCCCAGCTACCCCCGAACCTCCATACCCCATT CTGGAGACCTCCCAGCTACCCCCAAACCTCCATACCCCATT < 41bp 0.735709237070034 0.505473889795007 0.043739557 0.031502336 prediction 0.460470694550054 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6499939 chr12:6499942 nonsynonymous SNV 0.041 1 24 hm5C_associated_SNPs_74846 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:6499916-6499965
64251 chr12 9809721 9809721 1 + G T rs7316769 9809719 + 9809699 9809739 41 AGACTCCAGAATGGTGGAATCAGCAGCAGCTTCCACCATGC AGACTCCAGAATGGTGGAATCATCAGCAGCTTCCACCATGC < 41bp 0.880911637470244 0.650687098470971 0.9158784 0.41630223 prediction 0.460449077998546 Functional Loss - LOC374443 ENSG00000256594 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr12:9809719 chr12:9809721 . . 0 23 hm5C_associated_SNPs_74850 0 0 7 FASTKD2 POSTAR2 ENCODE chr12:9809669-9809767
64251 chr5 178287009 178287009 1 + G T rs7446382 178287007 + 178286987 178287027 41 TCTGCGGAGCTTTCGCTGCCCGGTGAGCGGCGCCGGGCTTG TCTGCGGAGCTTTCGCTGCCCGTTGAGCGGCGCCGGGCTTG < 41bp 0.894587215093619 0.664363033128688 0.70074546 0.06266883 prediction 0.460448363929861 Functional Loss - ZNF354B ENSG00000178338 UTR5 Human protein_coding chr5:178287007 chr5:178287009 . . 0 23 hm5C_associated_SNPs_74851 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr5:178286975-178287010
64251 chr4 55589852 55589852 1 + G A UCEC 55589849 + 55589829 55589869 41 AATAGATTGGTATTTTTGTCCAGGAACTGAGCAGAGGTGAG AATAGATTGGTATTTTTGTCCAGAAACTGAGCAGAGGTGAG < 41bp 0.735536839720714 0.505320383394125 0.8306673 0.7106005 prediction 0.460432912653178 Functional Loss - KIT ENSG00000157404 CDS Human protein_coding chr4:55589849 chr4:55589852 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_74853 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr4:55589833-55589863
64251 chr11 563475 563475 1 + G A UCEC 563472 + 563452 563492 41 TGCTGGTGCCCAGCCTAGGCCCCGAGGGTATGTCTGTGCCC TGCTGGTGCCCAGCCTAGGCCCCAAGGGTATGTCTGTGCCC < 41bp 0.776991311909204 0.546783978207089 0.18829757 0.06486225 prediction 0.460414667404229 Functional Loss - RASSF7 ENSG00000099849 CDS Human protein_coding chr11:563472 chr11:563475 nonsynonymous SNV 0.040 1 24 hm5C_associated_SNPs_74859 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:563439-563481
64251 chr3 49052346 49052346 1 + C T STAD 49052344 + 49052324 49052364 41 CCACCCGTGAGGGCCACCATCTCGTGGCCAGTGGCAGTGAA CCACCCGTGAGGGCCACCATCTTGTGGCCAGTGGCAGTGAA < 41bp 0.730205664333453 0.459992443313415 0.15272409 0.09637776 prediction 0.460411328666906 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49052344 chr3:49052346 synonymous SNV . 0 23 hm5C_associated_SNPs_74860 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49052330-49052362
64251 chr19 42582950 42582950 1 + G A HNSC 42582947 + 42582927 42582967 41 GCCACAGACACAGCTTCAGGCACGGGCCTCTATCAGACCCT GCCACAGACACAGCTTCAGGCACAGGCCTCTATCAGACCCT < 41bp 0.730205181099822 0.484375075100905 0.19847906 0.06834054 prediction 0.460410362199645 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42582947 chr19:42582950 synonymous SNV . 0 24 hm5C_associated_SNPs_74861 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:42582924-42582968
64251 chr11 64938924 64938924 1 + C T SKCM 64938922 + 64938902 64938942 41 AAGGTGGGGGCAATGGGTTCCTCCGTTTTCGCCAGCACCAG AAGGTGGGGGCAATGGGTTCCTTCGTTTTCGCCAGCACCAG < 41bp 0.807103989883282 0.576899923827718 0.1620121 0.10705584 prediction 0.460408132111129 Functional Loss - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64938922 chr11:64938924 synonymous SNV . 0 23 hm5C_associated_SNPs_74863 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64938902-64938927
64251 chr10 44112215 44112215 1 + T C UCEC 44112214 + 44112194 44112234 41 ATTCATACTGGCCAGAAACCCTACAAATGTAATGACTGTGG ATTCATACTGGCCAGAAACCCCACAAATGTAATGACTGTGG < 41bp 0.786610298044944 0.556407118790083 0.5347865 0.102865726 prediction 0.460406358509722 Functional Loss - ZNF485 ENSG00000198298 CDS Human protein_coding chr10:44112214 chr10:44112215 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_74864 0 0 1 UCHL5 POSTAR2 ENCODE chr10:44112176-44112325
64251 chr5 96315382 96315382 1 + C T UCEC 96315380 + 96315360 96315400 41 AGCCTACACCCGAACCTAACCTCGATGACATTCAGGGGTTC AGCCTACACCCGAACCTAACCTTGATGACATTCAGGGGTTC < 41bp 0.860466583209568 0.630263475631341 0.26805592 0.033663332 prediction 0.460406215156454 Functional Loss - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96315380 chr5:96315382 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_74865 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:96315349-96315382
64251 chr12 104732944 104732944 1 + G A UCEC 104732941 + 104732921 104732961 41 GTGTTGTGGGCTTTCACGTACTGGGTCCAAATGCTGGAGAA GTGTTGTGGGCTTTCACGTACTGAGTCCAAATGCTGGAGAA < 41bp 0.734271534335044 0.504070585039083 0.40489766 0.30400223 prediction 0.460401898591922 Functional Loss - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104732941 chr12:104732944 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_74868 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr12:104732923-104732976
64251 chr8 22428578 22428578 1 + G A UCEC 22428575 + 22428555 22428595 41 GACGACGGCCCCCAGCTCCCCACGTCTCCCCGCCTGACCGC GACGACGGCCCCCAGCTCCCCACATCTCCCCGCCTGACCGC < 41bp 0.730198926070734 0.481425011125493 0.16229373 0.10397068 prediction 0.460397852141469 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22428575 chr8:22428578 synonymous SNV . 0 24 hm5C_associated_SNPs_74872 0 0 1 IGF2BP2 POSTAR2 ENCODE chr8:22428547-22428735
64251 chr2 47703619 47703619 1 + T C KIRC 47703618 + 47703598 47703638 41 GCAGAAGTGTCCATTGTGGACTGCATCTTAGCCCGAGTAGG GCAGAAGTGTCCATTGTGGACCGCATCTTAGCCCGAGTAGG < 41bp 0.730196202274435 0.470997363729682 0.05505082 0.061941057 prediction 0.46039240454887 Functional Loss - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47703618 chr2:47703619 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_74873 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:47703583-47703620
64251 chrX 77380482 77380482 1 + C T rs183087139 77380480 + 77380460 77380500 41 ATTTGAATGGGAAGCTTTTGCCCGGGGAACCAAAGCTCTCA ATTTGAATGGGAAGCTTTTGCCTGGGGAACCAAAGCTCTCA < 41bp 0.8181821124708 0.587990919708707 0.85694313 0.5750361 prediction 0.460382385524185 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77380480 chrX:77380482 nonsynonymous SNV 0.604 2 23 hm5C_associated_SNPs_74877 0 0 21 TARDBP POSTAR2 DRA001158,DRS012386 chrX:77380405-77380487
64251 chr10 112361903 112361903 1 + G T HNSC 112361901 + 112361881 112361921 41 TGATGAATGTACTTGAACTTCGGAAATATGAAGCTATTCAG TGATGAATGTACTTGAACTTCGTAAATATGAAGCTATTCAG < 41bp 0.730189150324964 0.416630417731173 0.03211668 0.028293073 prediction 0.460378300649928 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112361901 chr10:112361903 synonymous SNV . 0 23 hm5C_associated_SNPs_74879 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:112361876-112361921
64251 chr12 108082460 108082460 1 + G A CESC 108082457 + 108082437 108082477 41 AGAAGATGGCATGCAGAGTGCACGCACCCAGGCACGCCCAA AGAAGATGGCATGCAGAGTGCACACACCCAGGCACGCCCAA < 41bp 0.785011619939347 0.554833821233356 0.030160427 0.018037915 prediction 0.460355597411982 Functional Loss - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108082457 chr12:108082460 nonsynonymous SNV 0.948 0 24 hm5C_associated_SNPs_74883 0 0 8 FMR1 POSTAR2 ENCODE chr12:108082402-108082543
64251 chr1 114448282 114448282 1 + G A COAD 114448279 + 114448259 114448299 41 CCTGCGCCGGGCTGGCACCGCACGTCTCTTCTTCTTGTCTC CCTGCGCCGGGCTGGCACCGCACATCTCTTCTTCTTGTCTC < 41bp 0.766738904545057 0.536579738797156 0.27513528 0.17891821 prediction 0.460318331495802 Functional Loss - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114448279 chr1:114448282 nonsynonymous SNV 0.494 4 24 hm5C_associated_SNPs_74892 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:114448255-114448311
64251 chr7 21469945 21469945 1 + G T CESC 21469942 + 21469922 21469962 41 CTAATGGAATGCAGAATGCACAGGATCAATCAAATTCTCTT CTAATGGAATGCAGAATGCACAGTATCAATCAAATTCTCTT < 41bp 0.730158555425095 0.344792441170907 0.028236508 0.022515237 prediction 0.460317110850189 Functional Loss - SP4 ENSG00000105866 CDS Human protein_coding chr7:21469942 chr7:21469945 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_74894 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:21469939-21469977
64251 chr7 21469946 21469946 1 + A C UCEC 21469942 + 21469922 21469962 41 CTAATGGAATGCAGAATGCACAGGATCAATCAAATTCTCTT CTAATGGAATGCAGAATGCACAGGCTCAATCAAATTCTCTT < 41bp 0.730158555425095 0.327568738689391 0.028236508 0.18572795 prediction 0.460317110850189 Functional Loss - SP4 ENSG00000105866 CDS Human protein_coding chr7:21469942 chr7:21469946 nonsynonymous SNV 0.990 2 25 hm5C_associated_SNPs_74895 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:21469939-21469977
64251 chr8 145161326 145161326 1 + G A COAD 145161323 + 145161303 145161343 41 CTGAAACCACAGCTGTGGAACGCGGTGGACGAGGAGATCTG CTGAAACCACAGCTGTGGAACGCAGTGGACGAGGAGATCTG < 41bp 0.764866510182672 0.534723524494801 0.6430103 0.21110743 prediction 0.460285971375742 Functional Loss - MAF1 ENSG00000179632 CDS Human protein_coding chr8:145161323 chr8:145161326 synonymous SNV . 0 24 hm5C_associated_SNPs_74901 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:145161305-145161333
64251 chr11 57569254 57569254 1 + T C PRAD 57569253 + 57569233 57569273 41 GTGCCATCGGATCAATACTACTGGGCTCCTTTGGCCCAGCA GTGCCATCGGATCAATACTACCGGGCTCCTTTGGCCCAGCA < 41bp 0.759994973834691 0.529855733201666 0.38753346 0.30470306 prediction 0.460278481266051 Functional Loss - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57569253 chr11:57569254 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_74904 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:57569217-57569260
64251 chr12 49742746 49742746 1 + G A BRCA 49742743 + 49742723 49742763 41 TGTACCTGGGAAGGGACAGCCACGCCCTGCTCTGGATGCTG TGTACCTGGGAAGGGACAGCCACACCCTGCTCTGGATGCTG < 41bp 0.730137336651826 0.487621820763664 0.2270498 0.07283571 prediction 0.460274673303653 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742743 chr12:49742746 nonsynonymous SNV 0.952 4 24 hm5C_associated_SNPs_74905 0 0 2 DDX3X POSTAR2 ENCODE chr12:49742746-49742806
64251 chr16 88874666 88874666 1 + C T COAD 88874664 + 88874644 88874684 41 TGCACGCCTGGCCCACCAGACACGTGCTGAGGAGGGGCTGT TGCACGCCTGGCCCACCAGACATGTGCTGAGGAGGGGCTGT < 41bp 0.730135856608039 0.491441617902322 0.2185652 0.30009854 prediction 0.460271713216078 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874664 chr16:88874666 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_74906 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88874618-88874682
64251 chr3 133489414 133489414 1 + G T LUAD 133489411 + 133489391 133489431 41 CCAGACTGTCCCACAGAACACTGGGGGTAAGTGCACCTGCT CCAGACTGTCCCACAGAACACTGTGGGTAAGTGCACCTGCT < 41bp 0.730128669171739 0.333413251533303 0.9360929 0.8038244 prediction 0.460257338343479 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133489411 chr3:133489414 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_74912 0 0 6 LIN28B POSTAR2 ENCODE chr3:133489411-133489416
64251 chr3 111805250 111805250 1 + G C rs376310649 111805249 + 111805229 111805269 41 GCCGCTCAGACTTTCCCTGCCGGCACATGGACCTGGCCCAA GCCGCTCAGACTTTCCCTGCCCGCACATGGACCTGGCCCAA < 41bp 0.8647449054498 0.634629138125054 0.31817678 0.034925878 prediction 0.460231534649494 Functional Loss - C3orf52 ENSG00000114529 UTR5 Human protein_coding chr3:111805249 chr3:111805250 . . 0 22 hm5C_associated_SNPs_74922 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585670 chr3:111805237-111805257
64251 chr21 48064353 48064353 1 + G A UCEC 48064350 + 48064330 48064370 41 AGCACGTGGATGAGTACGACCCCGAGGACACGTGGCAGGAT AGCACGTGGATGAGTACGACCCCAAGGACACGTGGCAGGAT < 41bp 0.761181541237074 0.53107449117232 0.37725067 0.2285169 prediction 0.460214100129509 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48064350 chr21:48064353 nonsynonymous SNV 0.193 3 24 hm5C_associated_SNPs_74926 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr21:48064323-48064355
64251 chr4 110415857 110415857 1 + C T LGG 110415855 + 110415835 110415875 41 TGCTCCAGCTCCAGCTTCAGCTCCAGCTCCTGTCGTCCCTC TGCTCCAGCTCCAGCTTCAGCTTCAGCTCCTGTCGTCCCTC < 41bp 0.84975470560345 0.619650507805718 0.4471722 0.058923125 prediction 0.460208395595463 Functional Loss - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415855 chr4:110415857 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_74929 0 0 5 IGF2BP1 POSTAR2 ENCODE chr4:110415848-110415993
64251 chr5 172362214 172362214 1 + G A UCEC 172362211 + 172362191 172362231 41 GAATACGTCGCCTACAGCCACACGGGCCGCATCATCCCTGC GAATACGTCGCCTACAGCCACACAGGCCGCATCATCCCTGC < 41bp 0.730091242561421 0.490463247036806 0.27566192 0.015557766 prediction 0.460182485122843 Functional Loss - ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172362211 chr5:172362214 synonymous SNV . 0 24 hm5C_associated_SNPs_74943 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:172362207-172362226
64251 chr10 104488286 104488286 1 + G T GBM 104488284 + 104488264 104488304 41 GCGGCTTCCCCCACATCAGTCAGGTAGGAGACCTGAACCCC GCGGCTTCCCCCACATCAGTCATGTAGGAGACCTGAACCCC < 41bp 0.730081903081261 0.370642357548969 0.87895274 0.21437863 prediction 0.460163806162522 Functional Loss - SFXN2 ENSG00000156398 CDS Human protein_coding chr10:104488284 chr10:104488286 nonsynonymous SNV 0.897 1 23 hm5C_associated_SNPs_74949 0 0 4 PPIG POSTAR2 ENCODE chr10:104488230-104488304
64251 chr5 78573778 78573778 1 + G A rs35345418 78573775 + 78573755 78573795 41 CAGAGAGCATGGTGGAGCTTCTGGACTTGTATCAGATGGAG CAGAGAGCATGGTGGAGCTTCTGAACTTGTATCAGATGGAG < 41bp 0.730080478066804 0.493973953637312 0.22101128 0.15701336 prediction 0.460160956133608 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78573775 chr5:78573778 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_74951 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:78573745-78573783
64251 chr1 154951413 154951413 1 + G A rs6910 154951410 + 154951390 154951430 41 TGCTGGTAACTGCTTTGCTTCTTGAGTAGAGCCACCACCAC TGCTGGTAACTGCTTTGCTTCTTAAGTAGAGCCACCACCAC < 41bp 0.747188981343851 0.517115355511574 0.06960338 0.027950883 prediction 0.460147251664554 Functional Loss - CKS1B ENSG00000173207 UTR3 Human protein_coding chr1:154951410 chr1:154951413 . . 0 24 hm5C_associated_SNPs_74956 0 0 1 UPF1 POSTAR2 ENCODE chr1:154951412-154951438
64251 chr7 6624862 6624862 1 + C T SKCM 6624859 + 6624839 6624879 41 ACATCGATGACCTTGGACACCTCCATGTTATGGACACGGTC ACATCGATGACCTTGGACACCTCTATGTTATGGACACGGTC < 41bp 0.733889364741959 0.503832092773172 0.96122885 0.90215814 prediction 0.460114543937573 Functional Loss - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6624859 chr7:6624862 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_74964 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr7:6624854-6624864
64251 chr7 99103728 99103728 1 + G T MESO 99103725 + 99103705 99103745 41 ACCCCCCAGCTGAGACTTCCCAGGAGCAGGAAGACCTTTTC ACCCCCCAGCTGAGACTTCCCAGTAGCAGGAAGACCTTTTC < 41bp 0.888891570519941 0.658846489451355 0.89761996 0.17808512 prediction 0.460090162137172 Functional Loss - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99103725 chr7:99103728 stopgain 0.998 0 24 hm5C_associated_SNPs_74967 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:99103647-99103734
64251 chr3 126423232 126423232 1 + A C rs202222271 126423228 + 126423208 126423248 41 AGGAGGAGCGGGTCCGGGTGCTGCAGGGTGTCCGGGTGAGC AGGAGGAGCGGGTCCGGGTGCTGCCGGGTGTCCGGGTGAGC < 41bp 0.915426510949075 0.685381686203893 0.43154 0.4345111 prediction 0.460089649490364 Functional Loss - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126423228 chr3:126423232 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_74969 0 0 6 BUD13 POSTAR2 ENCODE chr3:126423185-126423242
64251 chr14 65197822 65197822 1 + A C ESCA 65197818 + 65197798 65197838 41 GTGGTGGAGGATGCCATTGACACCATGACCTGTGTGGCCTG GTGGTGGAGGATGCCATTGACACCCTGACCTGTGTGGCCTG < 41bp 0.730043204774394 0.295877985054767 0.30721462 0.18147066 prediction 0.460086409548788 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65197818 chr14:65197822 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_74971 0 0 1 PPIG POSTAR2 ENCODE chr14:65197778-65197888
64251 chr19 55900174 55900174 1 + A C rs118132990 55900173 + 55900153 55900193 41 GATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACA GATGAGATGACTTTTGCATCCCGGGAGTGGGTGCAGCCACA < 41bp 0.8020228364701 0.571988340406168 0.82449937 0.6875755 prediction 0.460068992127863 Functional Loss - RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55900173 chr19:55900174 . . 0 22 hm5C_associated_SNPs_74974 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:55900137-55900217
64251 chr22 29445207 29445207 1 + G A GBM 29445204 + 29445184 29445224 41 GAACAAAAGGGAAACCCAAGCGCGGTGTGTGTGGAGACCAG GAACAAAAGGGAAACCCAAGCGCAGTGTGTGTGGAGACCAG < 41bp 0.752855023260404 0.522821060915654 0.39667523 0.15189883 prediction 0.460067924689499 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445204 chr22:29445207 synonymous SNV . 0 24 hm5C_associated_SNPs_74975 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:29445184-29445216
64251 chr17 79205719 79205719 1 - G A CESC 79205721 - 79205701 79205741 41 AACAGCGACCTGAGCAGGGTCTCGGACTCGGGCAGTCATTC AACAGCGACCTGAGCAGGGTCTTGGACTCGGGCAGTCATTC < 41bp 0.730030724870992 0.447352327574213 0.52541834 0.28650367 prediction 0.460061449741984 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205721 chr17:79205719 nonsynonymous SNV 0.012 1 23 hm5C_associated_SNPs_74978 0 0 3 BUD13 POSTAR2 ENCODE chr17:79205671-79205720
64251 chr1 158064905 158064905 1 + G A UCEC 158064902 + 158064882 158064922 41 TCCAGCAGCGCATGCAGACTCACGTGTAGGGGCCAGAGCCT TCCAGCAGCGCATGCAGACTCACATGTAGGGGCCAGAGCCT < 41bp 0.774430203335373 0.544399869581333 0.63340217 0.33784753 prediction 0.460060667508079 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158064902 chr1:158064905 nonsynonymous SNV 0.972 3 24 hm5C_associated_SNPs_74979 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158064898-158064966
64251 chr4 1347099 1347099 1 + G T UCEC 1347097 + 1347077 1347117 41 ACAGCCATCCCAGACAGCCACAGGTGACCCCTCAGATGAGG ACAGCCATCCCAGACAGCCACATGTGACCCCTCAGATGAGG < 41bp 0.730029968577572 0.362327206653553 0.46620825 0.1600272 prediction 0.460059937155144 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347097 chr4:1347099 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_74980 0 0 4 BUD13 POSTAR2 ENCODE chr4:1347097-1347157
64251 chr15 22833543 22833543 1 + C T rs201313425 22833541 + 22833521 22833561 41 GAACATGGCGCGGCACGGGCCACCGTGGAGTCGGTTGGACG GAACATGGCGCGGCACGGGCCATCGTGGAGTCGGTTGGACG < 41bp 0.756191485018631 0.526161637155019 0.38548198 0.4996241 prediction 0.460059695727224 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22833541 chr15:22833543 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_74981 0 0 1 SRSF1 POSTAR2 ENCODE chr15:22833522-22833627
64251 chr11 22248881 22248881 1 + A C LUAD 22248877 + 22248857 22248897 41 GATGGAAGAACTTATTTTGTCAAGATCCATGCCCCTTGGGA GATGGAAGAACTTATTTTGTCAAGCTCCATGCCCCTTGGGA < 41bp 0.730029616104425 0.332237220857791 0.5247357 0.21224794 prediction 0.46005923220885 Functional Loss - ANO5 ENSG00000171714 CDS Human protein_coding chr11:22248877 chr11:22248881 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_74983 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:22248869-22248905
64251 chr16 2035999 2035999 1 + C T rs1802834 2035997 + 2035977 2036017 41 CAAAAGTGGATGAGCGCTGGCGCGACGGCTGGAAGGATGGC CAAAAGTGGATGAGCGCTGGCGTGACGGCTGGAAGGATGGC < 41bp 0.818955096579858 0.58892576507133 0.39247996 0.2867428 prediction 0.460058663017056 Functional Loss - GFER ENSG00000127554 CDS Human protein_coding chr16:2035997 chr16:2035999 synonymous SNV . 0 23 hm5C_associated_SNPs_74984 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:2035980-2036000
64251 chr12 132379629 132379629 1 + C T GBM 132379627 + 132379607 132379647 41 CTGATCGGCCACGGCGCCTTCGCGGTGGTCTTCAAGGGCCG CTGATCGGCCACGGCGCCTTCGTGGTGGTCTTCAAGGGCCG < 41bp 0.742887475122723 0.512858576746159 0.7978878 0.86968243 prediction 0.460057796753129 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132379627 chr12:132379629 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_74985 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:132379609-132379642
64251 chr4 3446111 3446111 1 + C T STAD 3446109 + 3446089 3446129 41 GGGCCCGCGTGCGCCAGGGCCACGTGGAACAGTGCGAGTGC GGGCCCGCGTGCGCCAGGGCCATGTGGAACAGTGCGAGTGC < 41bp 0.779614598167803 0.549598592745942 0.80689585 0.61794037 prediction 0.460032010843723 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3446109 chr4:3446111 synonymous SNV . 0 23 hm5C_associated_SNPs_74991 0 0 2 PPIG POSTAR2 ENCODE chr4:3446053-3446146
64251 chr5 137766111 137766111 1 + C T SARC 137766109 + 137766089 137766129 41 TCATACCTGCTGGAGCCCCACACCAGGTGGGTTCCTGCTTG TCATACCTGCTGGAGCCCCACATCAGGTGGGTTCCTGCTTG < 41bp 0.730013737599771 0.440281644320596 0.15256551 0.19166368 prediction 0.460027475199541 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137766109 chr5:137766111 synonymous SNV . 0 23 hm5C_associated_SNPs_74992 0 0 1 BUD13 POSTAR2 ENCODE chr5:137766079-137766115
64251 chr21 30716114 30716114 1 + G A rs561332310 30716111 + 30716091 30716131 41 GAATGTTGCTTACTTTTTACCAGGAGTGCAGTTCATTTTTT GAATGTTGCTTACTTTTTACCAGAAGTGCAGTTCATTTTTT < 41bp 0.732564330686798 0.502560974791419 0.9320419 0.91550016 prediction 0.460006711790757 Functional Loss - BACH1 ENSG00000156273 UTR3 Human protein_coding chr21:30716111 chr21:30716114 . . 0 24 hm5C_associated_SNPs_74996 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30716077-30716124
64251 chr12 64818918 64818918 1 + G T COAD 64818916 + 64818896 64818936 41 ATCTCATGGTGCTCACTTCTCAGGTGATGTTTCAAAAGCTA ATCTCATGGTGCTCACTTCTCATGTGATGTTTCAAAAGCTA < 41bp 0.730002529324551 0.383780508253144 0.8865024 0.31909603 prediction 0.460005058649102 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64818916 chr12:64818918 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_74998 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:64818883-64818983
64251 chr19 54609317 54609317 1 + A C GBM 54609316 + 54609296 54609336 41 GGCCACGCCCTACAACTACCCAGGTGAGTGGGGGCCAGGCA GGCCACGCCCTACAACTACCCCGGTGAGTGGGGGCCAGGCA < 41bp 0.812175942945462 0.582179452638136 0.8338398 0.25329936 prediction 0.459992980614654 Functional Loss - NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54609316 chr19:54609317 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_75003 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:54609287-54609318
64251 chr17 79968738 79968738 1 + G C UCEC 79968737 + 79968717 79968757 41 CAGGGCTTCTTCCGCCCCAGCGAGACAGGTGGGCAGCGCTG CAGGGCTTCTTCCGCCCCAGCCAGACAGGTGGGCAGCGCTG < 41bp 0.871595513758423 0.641602369931499 0.8708738 0.33191335 prediction 0.459986287653847 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79968737 chr17:79968738 nonsynonymous SNV 0.828 4 22 hm5C_associated_SNPs_75006 0 0 3 GRWD1 POSTAR2 ENCODE chr17:79968708-79968740
64251 chr19 19618294 19618294 1 + G A rs10411169 19618291 + 19618271 19618311 41 TCTATGCAGTGGCTGGGGATCAGGCATCCAGACCGAAGTCA TCTATGCAGTGGCTGGGGATCAGACATCCAGACCGAAGTCA < 41bp 0.750210228115294 0.520222247822708 0.60714144 0.23860458 prediction 0.459975960585172 Functional Loss - GATAD2A ENSG00000167491 UTR3 Human protein_coding chr19:19618291 chr19:19618294 . . 0 24 hm5C_associated_SNPs_75011 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:19618267-19618298
64251 chr11 65688806 65688806 1 + C T SKCM 65688804 + 65688784 65688824 41 TGCCTTCTGCCCTGCAGCCCCCCGACACCCTTCCTGCCCTT TGCCTTCTGCCCTGCAGCCCCCTGACACCCTTCCTGCCCTT < 41bp 0.788317031749421 0.558329476451684 0.28530926 0.20796725 prediction 0.459975110595475 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65688804 chr11:65688806 nonsynonymous SNV 0.592 0 23 hm5C_associated_SNPs_75012 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:65688800-65688820
64251 chr2 220396815 220396815 1 + G T UCEC 220396813 + 220396793 220396833 41 GCTGGGGTTCGGGGTGTCCCCAGGCTTCCAGACCTTTGTGT GCTGGGGTTCGGGGTGTCCCCATGCTTCCAGACCTTTGTGT < 41bp 0.899063812467752 0.669078231997057 0.919852 0.7788925 prediction 0.459971160941391 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220396813 chr2:220396815 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75014 0 0 2 EIF4G2 POSTAR2 ENCODE chr2:220396815-220396822
64251 chr19 49983671 49983671 1 + G A UCEC 49983668 + 49983648 49983688 41 TGCCCGTGGGCCTCCTGCTGCTGGCCGCTGCCTGGTGCCTG TGCCCGTGGGCCTCCTGCTGCTGACCGCTGCCTGGTGCCTG < 41bp 0.729984674819026 0.476356460053246 0.13691002 0.11767903 prediction 0.459969349638052 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49983668 chr19:49983671 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_75015 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:49983643-49983688
64251 chr9 131742985 131742985 1 + G A SKCM 131742982 + 131742962 131743002 41 ACTGCTCCGAGCCCTGGTATCAGGGAAGTCCACAGCCAAAA ACTGCTCCGAGCCCTGGTATCAGAGAAGTCCACAGCCAAAA < 41bp 0.762553687883394 0.532575205213995 0.94213545 0.92799187 prediction 0.459956965338797 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131742982 chr9:131742985 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75019 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:131742978-131743001
64251 chr9 100396052 100396052 1 + G C rs73551097 100396048 + 100396028 100396068 41 GCCGTGGCGAGCTAGTGCGCCTGCGTGCCGGCCCATCCGCG GCCGTGGCGAGCTAGTGCGCCTGCCTGCCGGCCCATCCGCG < 41bp 0.736487006955227 0.506509296974201 0.54078335 0.67131364 prediction 0.459955419962051 Functional Loss - NCBP1 ENSG00000136937 UTR5 Human protein_coding chr9:100396048 chr9:100396052 . . 0 25 hm5C_associated_SNPs_75020 0 0 4 DDX3X POSTAR2 ENCODE chr9:100396023-100396071
64251 chr16 82131894 82131894 1 + G A LUSC 82131891 + 82131871 82131911 41 AAGAGCCCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTA AAGAGCCCTTTTGCCTATTACACACCAGGGAAAGGCGCTTA < 41bp 0.729960550909847 0.485300922339587 0.13392368 0.06503773 prediction 0.459921101819695 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82131891 chr16:82131894 synonymous SNV . 0 24 hm5C_associated_SNPs_75025 0 0 2 LARP4 POSTAR2 ENCODE chr16:82131875-82132014
64251 chr16 82131893 82131893 1 + C T UCEC 82131891 + 82131871 82131911 41 AAGAGCCCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTA AAGAGCCCTTTTGCCTATTACATGCCAGGGAAAGGCGCTTA < 41bp 0.729960550909847 0.472380780777951 0.13392368 0.15777269 prediction 0.459921101819695 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82131891 chr16:82131893 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_75026 0 0 2 LARP4 POSTAR2 ENCODE chr16:82131875-82132014
64251 chr9 101589095 101589095 1 + C T BRCA 101589093 + 101589073 101589113 41 TGCCCAAGGTGCGCCTGATCCGCGCCAACAAGAGAGAGGGC TGCCCAAGGTGCGCCTGATCCGTGCCAACAAGAGAGAGGGC < 41bp 0.832969815291388 0.603012380723895 0.5958634 0.26179498 prediction 0.459914869134985 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101589093 chr9:101589095 synonymous SNV . 0 23 hm5C_associated_SNPs_75028 0 0 1 DDX24 POSTAR2 ENCODE chr9:101589031-101589106
64251 chr3 186793702 186793702 1 + G A rs2239611 186793699 + 186793679 186793719 41 TCCAGCCTGCTCCTTTTACTCTAGGGGCCTCTGTCAGCAAG TCCAGCCTGCTCCTTTTACTCTAAGGGCCTCTGTCAGCAAG < 41bp 0.757168743867681 0.527211857892974 0.8949256 0.39561272 prediction 0.459913771949415 Functional Loss - ST6GAL1 ENSG00000073849 UTR3 Human protein_coding chr3:186793699 chr3:186793702 . . 0 24 hm5C_associated_SNPs_75031 0 0 8 IGF2BP1 POSTAR2 ENCODE chr3:186793697-186793754
64251 chr5 143586723 143586723 1 + G T CESC 143586720 + 143586700 143586740 41 TGCCTCCCAAGGAAGCGACACAAGAATCTGCCCCCCTTCCT TGCCTCCCAAGGAAGCGACACAATAATCTGCCCCCCTTCCT < 41bp 0.729953338848151 0.343349862339075 0.16894549 0.16071126 prediction 0.459906677696303 Functional Loss - KCTD16 ENSG00000183775 CDS Human protein_coding chr5:143586720 chr5:143586723 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_75032 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:143586720-143586740
64251 chr9 131348188 131348188 1 + G T CESC 131348185 + 131348165 131348205 41 ACGAGGCTGAATCCTGGATGCGGGAGAAGGAACCCATTGTG ACGAGGCTGAATCCTGGATGCGGTAGAAGGAACCCATTGTG < 41bp 0.729949701557505 0.371624025197643 0.9070567 0.8322209 prediction 0.45989940311501 Functional Loss - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131348185 chr9:131348188 stopgain 1.000 1 24 hm5C_associated_SNPs_75034 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131348151-131348201
64251 chr1 26448562 26448562 1 + C T BRCA 26448560 + 26448540 26448580 41 GCCTGATAACATCCTGATTTCTCAAACCAGGTTGGATACCA GCCTGATAACATCCTGATTTCTTAAACCAGGTTGGATACCA < 41bp 0.729948726171939 0.440825233127334 0.4597565 0.05721593 prediction 0.459897452343878 Functional Loss - PDIK1L ENSG00000175087 CDS Human protein_coding chr1:26448560 chr1:26448562 stopgain 0.998 1 23 hm5C_associated_SNPs_75035 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:26448544-26448573
64251 chr19 14517156 14517156 1 + G T KIRP 14517154 + 14517134 14517174 41 GCCCCGCAGGTGGGGCTGCGCTGCCGCCTGGTGGCCGGGCT GCCCCGCAGGTGGGGCTGCGCTTCCGCCTGGTGGCCGGGCT < 41bp 0.729942261644055 0.372925790892611 0.051334083 0.06591511 prediction 0.459884523288109 Functional Loss - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14517154 chr19:14517156 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75040 0 0 2 SND1 POSTAR2 ENCODE chr19:14517142-14517171
64251 chr19 39395976 39395976 1 + C T UCEC 39395974 + 39395954 39395994 41 TGGCCTGCCGTGTGGGGGCACACGCCTGTGCCCGTGCCCTG TGGCCTGCCGTGTGGGGGCACATGCCTGTGCCCGTGCCCTG < 41bp 0.78092905066009 0.550987069984295 0.2408832 0.3791682 prediction 0.45988396135159 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395974 chr19:39395976 synonymous SNV . 0 23 hm5C_associated_SNPs_75041 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39395956-39395977
64251 chr19 2807643 2807643 1 + G A UCEC 2807640 + 2807620 2807660 41 TCAAGGAGTACTTCCCCGTGCAGGTGGTCACGCACGGGCTG TCAAGGAGTACTTCCCCGTGCAGATGGTCACGCACGGGCTG < 41bp 0.72993628006737 0.479907856402756 0.92165816 0.8555074 prediction 0.45987256013474 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2807640 chr19:2807643 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_75046 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:2807640-2807660
64251 chr9 35607978 35607978 1 + T C rs7018639 35607977 + 35607957 35607997 41 TGAGCTCATCGCCCGAGTACCTGCAGACCCTGACTACCTAC TGAGCTCATCGCCCGAGTACCCGCAGACCCTGACTACCTAC < 41bp 0.729933292810456 0.465009862558481 0.5537188 0.15969318 prediction 0.459866585620911 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35607977 chr9:35607978 synonymous SNV . 0 22 hm5C_associated_SNPs_75047 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr9:35607967-35607994
64251 chr1 186389414 186389414 1 + G C rs185080818 186389413 + 186389393 186389433 41 AATCAGAAACAAGAAGACATCGGAATCTGAGATGCTGCCCT AATCAGAAACAAGAAGACATCCGAATCTGAGATGCTGCCCT < 41bp 0.826058731548103 0.596140830331321 0.7835617 0.11396775 prediction 0.459835802433565 Functional Loss - C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186389413 chr1:186389414 . . 0 22 hm5C_associated_SNPs_75056 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:186389391-186389433
64251 chr16 31121625 31121625 1 + G A BRCA 31121622 + 31121602 31121642 41 CCCTCTTGGCAGAGGGCCTACGTGAGAGCCGGAAGCACATA CCCTCTTGGCAGAGGGCCTACGTAAGAGCCGGAAGCACATA < 41bp 0.757768321207504 0.527855025384168 0.41968346 0.33681327 prediction 0.459826591646673 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31121622 chr16:31121625 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_75058 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:31121592-31121643
64251 chr5 137521329 137521329 1 + C T STAD 137521326 + 137521306 137521346 41 CAAAGGTTGGCAGCTTCTGCCTCCACCCAGCAGCTTCAGGA CAAAGGTTGGCAGCTTCTGCCTCTACCCAGCAGCTTCAGGA < 41bp 0.750337533410898 0.520428588902662 0.9119617 0.8490677 prediction 0.459817889016473 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137521326 chr5:137521329 synonymous SNV . 0 24 hm5C_associated_SNPs_75059 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:137521306-137521344
64251 chr12 113730818 113730818 1 + G C GBM 113730814 + 113730794 113730834 41 CCTGGAGCTCTACCGGGAGGCACGGGGGGCCTCCTCGGATG CCTGGAGCTCTACCGGGAGGCACGCGGGGCCTCCTCGGATG < 41bp 0.856746390120968 0.626837736454906 0.91957176 0.33429176 prediction 0.459817307332124 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113730814 chr12:113730818 synonymous SNV . 0 25 hm5C_associated_SNPs_75060 0 0 7 BUD13 POSTAR2 ENCODE chr12:113730797-113730856
64251 chr11 77907300 77907300 1 + G A ESCA 77907297 + 77907277 77907317 41 CGCAGCGCGGGCGCCATGGACAAGATCTTGGAGGCGGTGGT CGCAGCGCGGGCGCCATGGACAAAATCTTGGAGGCGGTGGT < 41bp 0.760895175374938 0.530986716834179 0.8713002 0.44683707 prediction 0.459816917081518 Functional Loss - USP35 ENSG00000118369 CDS Human protein_coding chr11:77907297 chr11:77907300 synonymous SNV . 0 24 hm5C_associated_SNPs_75061 0 0 1 BUD13 POSTAR2 ENCODE chr11:77907264-77907327
64251 chr5 224575 224575 1 + G A CESC 224572 + 224552 224592 41 TGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTG TGCATTTGGCCTTTCTGAGGCAGAGTTTAATACAGCATGTG < 41bp 0.775266686886959 0.545359454650837 0.84935164 0.5811175 prediction 0.459814464472245 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:224572 chr5:224575 nonsynonymous SNV 0.740 4 24 hm5C_associated_SNPs_75063 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:224550-224586
64251 chr11 70221118 70221118 1 + C T rs142482070 70221116 + 70221096 70221136 41 ATCTTATAGAGAGTGGTGTTCACGGAGCACTTCTGGCCTTA ATCTTATAGAGAGTGGTGTTCATGGAGCACTTCTGGCCTTA < 41bp 0.729902705230607 0.45766663734584 0.5888234 0.41598848 prediction 0.459805410461214 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70221116 chr11:70221118 synonymous SNV . 0 23 hm5C_associated_SNPs_75066 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:70221100-70221120
64251 chr3 57542835 57542835 1 + G A UCEC 57542832 + 57542812 57542852 41 ACCCCGTCCAATGCCGACATCGGGCTAAGGCTCAAGCTTCA ACCCCGTCCAATGCCGACATCGGACTAAGGCTCAAGCTTCA < 41bp 0.729900514817046 0.488558047416651 0.89560544 0.83309144 prediction 0.459801029634092 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542832 chr3:57542835 synonymous SNV . 0 24 hm5C_associated_SNPs_75067 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:57542817-57542840
64251 chr20 42271137 42271137 1 + A T UCEC 42271133 + 42271113 42271153 41 TCTTAGGTACTGAAGAAGACCTGGAATTTTATGTCAGGAAG TCTTAGGTACTGAAGAAGACCTGGTATTTTATGTCAGGAAG < 41bp 0.729896396944438 0.411357723538957 0.27369586 0.290241 prediction 0.459792793888876 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42271133 chr20:42271137 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_75071 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42271136-42271160
64251 chr4 7780517 7780517 1 + G A SKCM 7780514 + 7780494 7780534 41 CCCGTCCTTTTCACAACAGCCGCGGGATCCGCTTTCTTTGG CCCGTCCTTTTCACAACAGCCGCAGGATCCGCTTTCTTTGG < 41bp 0.762486919873727 0.532592243599007 0.43034148 0.08976868 prediction 0.459789352549441 Functional Loss - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7780514 chr4:7780517 synonymous SNV . 0 24 hm5C_associated_SNPs_75073 0 0 1 METAP2 POSTAR2 ENCODE chr4:7780498-7780579
64251 chr8 145135431 145135431 1 + G A rs142724505 145135428 + 145135408 145135448 41 GGAGGCTGCTGCCCAGGCTGCCCGAGATGTGCACACCCTCT GGAGGCTGCTGCCCAGGCTGCCCAAGATGTGCACACCCTCT < 41bp 0.729891103816428 0.493266039624534 0.27237976 0.116762936 prediction 0.459782207632857 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135428 chr8:145135431 nonsynonymous SNV 0.940 1 24 hm5C_associated_SNPs_75077 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145135366-145135433
64251 chr16 31139397 31139397 1 + C T LUSC 31139395 + 31139375 31139415 41 AGTGCCAGTGGCGGCAGCCCCCCGGGAAAGAGATCTACCGC AGTGCCAGTGGCGGCAGCCCCCTGGGAAAGAGATCTACCGC < 41bp 0.830674646510633 0.600791944349379 0.21555248 0.14957413 prediction 0.459765404322508 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31139395 chr16:31139397 synonymous SNV . 0 23 hm5C_associated_SNPs_75082 0 0 2 DDX24 POSTAR2 ENCODE chr16:31139369-31139425
64251 chr15 76206487 76206487 1 + T C UCEC 76206486 + 76206466 76206506 41 GTATGGAAACAGCACTTGCCCTTGAGAAGCTATTCCCCAAA GTATGGAAACAGCACTTGCCCCTGAGAAGCTATTCCCCAAA < 41bp 0.79135025758597 0.561472644707354 0.046105504 0.065932214 prediction 0.459755225757232 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76206486 chr15:76206487 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_75086 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:76206443-76206492
64251 chr16 28885076 28885076 1 + C T CESC 28885074 + 28885054 28885094 41 GGTGCAGCTGCAGCAGTCACCACTAGGGGGTGATGGAGAGG GGTGCAGCTGCAGCAGTCACCATTAGGGGGTGATGGAGAGG < 41bp 0.729868826749779 0.489730215197724 0.4736302 0.25608963 prediction 0.459737653499559 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28885074 chr16:28885076 synonymous SNV . 0 23 hm5C_associated_SNPs_75088 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:28885060-28885091
64251 chr14 31139516 31139516 1 + C T SKCM 31139514 + 31139494 31139534 41 ATCTTCAGGAGTGGAAAACTCTCCAGCTGGTGCTAGACCAA ATCTTCAGGAGTGGAAAACTCTTCAGCTGGTGCTAGACCAA < 41bp 0.865846125371498 0.635981535272669 0.9338746 0.31471673 prediction 0.459729180197658 Functional Loss - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31139514 chr14:31139516 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_75091 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:31139489-31139523
64251 chr22 24999249 24999249 1 + G A rs73404982 24999246 + 24999226 24999266 41 GTGCCCCAGTGCTGTGTGACCCAGAGGCGCCGCTCACCCTC GTGCCCCAGTGCTGTGTGACCCAAAGGCGCCGCTCACCCTC < 41bp 0.729863867105488 0.487905043412645 0.9065974 0.8454238 prediction 0.459727734210977 Functional Loss - GGT1 ENSG00000100031 UTR5 Human protein_coding chr22:24999246 chr22:24999249 . . 0 24 hm5C_associated_SNPs_75092 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr22:24999236-24999281
64251 chr6 108985139 108985139 1 + G A CESC 108985136 + 108985116 108985156 41 GCCGTGCACGGTGGAACTGCCACGGCTGACTGATATGGCAG GCCGTGCACGGTGGAACTGCCACAGCTGACTGATATGGCAG < 41bp 0.768386234319638 0.538524133468402 0.48532316 0.2810672 prediction 0.459724201702472 Functional Loss - FOXO3 ENSG00000118689 CDS Human protein_coding chr6:108985136 chr6:108985139 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_75094 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:108985120-108985140
64251 chr7 1131389 1131389 1 + G A PRAD 1131386 + 1131366 1131406 41 TGGATGTGACTTCCCAAGCCCGGGGCGTGGGCCTGGAGATG TGGATGTGACTTCCCAAGCCCGGAGCGTGGGCCTGGAGATG < 41bp 0.801867610449885 0.57201811726342 0.87512326 0.7693609 prediction 0.45969898637293 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131386 chr7:1131389 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_75101 0 0 1 RBM15 POSTAR2 ENCODE chr7:1131349-1131425
64251 chr22 46454047 46454047 1 + A C rs115868216 46454046 + 46454026 46454066 41 CAGTAGAGACATGGGTGACCCAAGGGCTCTGTTCAAGTCCT CAGTAGAGACATGGGTGACCCCAGGGCTCTGTTCAAGTCCT < 41bp 0.783404798696234 0.553555674411419 0.84719217 0.8359225 prediction 0.459698248569629 Functional Loss - PRR34-AS1 ENSG00000197182 intronic Human lincRNA chr22:46454046 chr22:46454047 . . 0 22 hm5C_associated_SNPs_75103 0 0 1 DGCR8 POSTAR2 ENCODE chr22:46454044-46454074
64251 chr22 21288253 21288253 1 + G A SKCM 21288250 + 21288230 21288270 41 CAGTGGTGGAGTGCCCGGAACAAGGATGGCCGGGTTGGGAT CAGTGGTGGAGTGCCCGGAACAAAGATGGCCGGGTTGGGAT < 41bp 0.729849000239303 0.482236499473106 0.43902698 0.26263028 prediction 0.459698000478606 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21288250 chr22:21288253 synonymous SNV . 0 24 hm5C_associated_SNPs_75104 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr22:21288208-21288254
64251 chr4 25335045 25335045 1 + C T CESC 25335043 + 25335023 25335063 41 TGGTAGACTTACTTTCTGCCCTCGGATTCAGAAGAGTACTG TGGTAGACTTACTTTCTGCCCTTGGATTCAGAAGAGTACTG < 41bp 0.729838728100759 0.444603399281704 0.03952548 0.025520533 prediction 0.459677456201519 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25335043 chr4:25335045 synonymous SNV . 0 23 hm5C_associated_SNPs_75112 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:25335026-25335064
64251 chr4 25335046 25335046 1 + G A UCEC 25335043 + 25335023 25335063 41 TGGTAGACTTACTTTCTGCCCTCGGATTCAGAAGAGTACTG TGGTAGACTTACTTTCTGCCCTCAGATTCAGAAGAGTACTG < 41bp 0.729838728100759 0.494937140936082 0.03952548 0.021920472 prediction 0.459677456201519 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25335043 chr4:25335046 nonsynonymous SNV 0.569 3 24 hm5C_associated_SNPs_75113 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:25335026-25335064
64251 chr2 96993248 96993248 1 + G A rs75541112 96993245 + 96993225 96993265 41 GTGCACCACCACAGGGACCCCTCGGCAGTCTTGGGGAAGTG GTGCACCACCACAGGGACCCCTCAGCAGTCTTGGGGAAGTG < 41bp 0.773957484502657 0.544120852338699 0.032117635 0.031077385 prediction 0.459673264327917 Functional Loss - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96993245 chr2:96993248 synonymous SNV . 0 24 hm5C_associated_SNPs_75114 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:96993180-96993280
64251 chr8 43046706 43046706 1 + G T OV 43046703 + 43046683 43046723 41 CTGGAAGGCCTGTGGCTGGGCTTGACATTCCTCCTGCCAGT CTGGAAGGCCTGTGGCTGGGCTTTACATTCCTCCTGCCAGT < 41bp 0.72983065896526 0.325813119770119 0.2930957 0.3326881 prediction 0.45966131793052 Functional Loss - HGSNAT ENSG00000165102 CDS Human protein_coding chr8:43046703 chr8:43046706 nonsynonymous SNV 0.710 0 24 hm5C_associated_SNPs_75121 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:43046696-43046709
64251 chr18 21057044 21057044 1 + T C OV 21057043 + 21057023 21057063 41 GTATAACATGCTGTGGCATGCTGGAAAGGTGAGGAGCACAT GTATAACATGCTGTGGCATGCCGGAAAGGTGAGGAGCACAT < 41bp 0.776942907071372 0.547115764563692 0.11344895 0.13927591 prediction 0.45965428501536 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21057043 chr18:21057044 synonymous SNV . 0 22 hm5C_associated_SNPs_75123 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr18:21056970-21057050
64251 chr19 37619518 37619518 1 + G A UCEC 37619515 + 37619495 37619535 41 TGAATGTGGAAAGGCCTTTGCGCGTGGCTTACTACTTATAC TGAATGTGGAAAGGCCTTTGCGCATGGCTTACTACTTATAC < 41bp 0.729822445303499 0.488950954850682 0.2672161 0.18552828 prediction 0.459644890606998 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37619515 chr19:37619518 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_75126 0 0 3 EWSR1 POSTAR2 SRX029343 chr19:37619514-37619543
64251 chr3 157920882 157920882 1 + C T SKCM 157920880 + 157920860 157920900 41 GGTCCAGGTCAAGACCTCGTCTCCGTTCTCATAGTCGTAGC GGTCCAGGTCAAGACCTCGTCTTCGTTCTCATAGTCGTAGC < 41bp 0.729821031378943 0.448817802906539 0.22033417 0.09388429 prediction 0.459642062757886 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157920880 chr3:157920882 synonymous SNV . 0 23 hm5C_associated_SNPs_75127 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr3:157920867-157920901
64251 chr16 24888677 24888677 1 + G A rs9932619 24888674 + 24888654 24888694 41 CTGGCCATCACTGCTGTATACACGGTTGCTGGTAAGACTGA CTGGCCATCACTGCTGTATACACAGTTGCTGGTAAGACTGA < 41bp 0.76345927237909 0.533639843880924 0.4489249 0.16594654 prediction 0.459638856996332 Functional Loss - SLC5A11 ENSG00000158865 CDS Human protein_coding chr16:24888674 chr16:24888677 synonymous SNV . 0 24 hm5C_associated_SNPs_75128 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:24888660-24888680
64251 chr5 140476411 140476411 1 + A C COAD 140476410 + 140476390 140476430 41 CCTGCTGCTCCCGGAGGCGGCACCGGCCCAGGCCCAGGCCG CCTGCTGCTCCCGGAGGCGGCCCCGGCCCAGGCCCAGGCCG < 41bp 0.782714117836047 0.552897845384831 0.8826635 0.8911748 prediction 0.459632544902433 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476410 chr5:140476411 synonymous SNV . 0 22 hm5C_associated_SNPs_75129 0 0 1 SND1 POSTAR2 ENCODE chr5:140476365-140476432
64251 chr16 30409511 30409511 1 + C T GBM 30409509 + 30409489 30409529 41 TGTGTGTGGAAAGGAGTTTGCCCGGGGATCCGACCTGGTGA TGTGTGTGGAAAGGAGTTTGCCTGGGGATCCGACCTGGTGA < 41bp 0.76144003357333 0.53162978530849 0.8621264 0.87745744 prediction 0.459620496529681 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409509 chr16:30409511 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_75133 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30409488-30409522
64251 chr11 13734568 13734568 1 + T C UCEC 13734567 + 13734547 13734587 41 GGCAGCACTAATCCTTTCCACTGGGGTGAAGTTGGTATGAT GGCAGCACTAATCCTTTCCACCGGGGTGAAGTTGGTATGAT < 41bp 0.749829078711605 0.520019190308873 0.2970266 0.44737703 prediction 0.459619776805464 Functional Loss - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13734567 chr11:13734568 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_75134 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:13734533-13734571
64251 chr6 53764595 53764595 1 + G A rs145944021 53764592 + 53764572 53764612 41 TGTTTAGATGTCTCTGAAAACAGGTTGGAAAGACTTCCTGA TGTTTAGATGTCTCTGAAAACAGATTGGAAAGACTTCCTGA < 41bp 0.733147405231832 0.503337984037808 0.4858679 0.36486262 prediction 0.459618842388049 Functional Loss - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53764592 chr6:53764595 synonymous SNV . 0 24 hm5C_associated_SNPs_75135 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:53764586-53764622
64251 chr2 216209508 216209508 1 + G A rs141872658 216209505 + 216209485 216209525 41 TTGTGTATGTGTTTCAGTTGCCAGAGTCTGCCCTCCGAGAC TTGTGTATGTGTTTCAGTTGCCAAAGTCTGCCCTCCGAGAC < 41bp 0.729799704777713 0.483321221874879 0.5369257 0.19059461 prediction 0.459599409555425 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216209505 chr2:216209508 nonsynonymous SNV 0.392 1 24 hm5C_associated_SNPs_75139 1 0 6 BUD13 POSTAR2 ENCODE chr2:216209502-216209582
64251 chr10 13164482 13164482 1 + G A BLCA 13164479 + 13164459 13164499 41 AGAATGATGAAGAGAAAGGCCCGGAGACTGTGAGTCCTAAG AGAATGATGAAGAGAAAGGCCCGAAGACTGTGAGTCCTAAG < 41bp 0.749346154620084 0.519551768332359 0.24658129 0.102522105 prediction 0.45958877257545 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13164479 chr10:13164482 nonsynonymous SNV 0.342 2 24 hm5C_associated_SNPs_75141 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:13164454-13164488
64251 chr2 177054586 177054586 1 + A T COAD 177054582 + 177054562 177054602 41 AGCCCCTCCAGCGCGATCCGCACGAATTTCAGCACCAAGCA AGCCCCTCCAGCGCGATCCGCACGTATTTCAGCACCAAGCA < 41bp 0.886528701493794 0.656736043965622 0.09755334 0.067546785 prediction 0.459585315056344 Functional Loss - HOXD1 ENSG00000128645 CDS Human protein_coding chr2:177054582 chr2:177054586 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_75144 0 0 1 PRPF8 POSTAR2 ENCODE chr2:177054525-177054589
64251 chr19 54966659 54966659 1 + C T COAD 54966657 + 54966637 54966677 41 TCGGAGGAGGACAAGGACCGCACGGAAAAGCTGCTCAAGGA TCGGAGGAGGACAAGGACCGCATGGAAAAGCTGCTCAAGGA < 41bp 0.729792349703805 0.471906183979243 0.72951543 0.61558163 prediction 0.45958469940761 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54966657 chr19:54966659 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_75145 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:54966580-54966660
64251 chr10 12131232 12131232 1 + G A LUAD 12131229 + 12131209 12131249 41 TCCAGACAACTCAGCCCAGCCGGGGGACAGGGTCATTTGCT TCCAGACAACTCAGCCCAGCCGGAGGACAGGGTCATTTGCT < 41bp 0.77539713827687 0.5456089559454 0.92178893 0.8667034 prediction 0.45957636466294 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131229 chr10:12131232 nonsynonymous SNV 0.902 5 24 hm5C_associated_SNPs_75149 0 0 2 DROSHA POSTAR2 ENCODE chr10:12131228-12131255
64251 chr12 56733288 56733288 1 + G T UCEC 56733285 + 56733265 56733305 41 GTGGAGATGGCTGTGACCCCCAAGGACTCAGGGACAACAGT GTGGAGATGGCTGTGACCCCCAATGACTCAGGGACAACAGT < 41bp 0.729785243689225 0.32528128552715 0.2755419 0.008899897 prediction 0.459570487378451 Functional Loss - IL23A ENSG00000110944 CDS Human protein_coding chr12:56733285 chr12:56733288 stopgain 1.000 1 24 hm5C_associated_SNPs_75150 0 0 1 ZNF622 POSTAR2 ENCODE chr12:56733211-56733308
64251 chr20 30102531 30102531 1 + C T rs116584522 30102529 + 30102509 30102549 41 TGCGCTCCGTACGCTGCGCCCGCGGCAAGGTAGGGTCAGCG TGCGCTCCGTACGCTGCGCCCGTGGCAAGGTAGGGTCAGCG < 41bp 0.790678221697548 0.560901002349856 0.593476 0.4847014 prediction 0.459554438695384 Functional Loss - HM13 ENSG00000101294 CDS Human protein_coding chr20:30102529 chr20:30102531 synonymous SNV . 0 23 hm5C_associated_SNPs_75154 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:30102493-30102537
64251 chr9 132995386 132995386 1 + G A rs11552458 132995383 + 132995363 132995403 41 ACACAGCCGGCTGCCCTTGACCCGGGAGGCCCCGGCTCTCC ACACAGCCGGCTGCCCTTGACCCAGGAGGCCCCGGCTCTCC < 41bp 0.779892271858202 0.550117933504982 0.37229347 0.046667337 prediction 0.45954867670644 Functional Loss - NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995383 chr9:132995386 . . 0 24 hm5C_associated_SNPs_75158 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:132995362-132995391
64251 chr1 65273018 65273018 1 + C T COAD 65273016 + 65272996 65273036 41 ACTCAGGAGAAACAGCCAGCCACGGTGGGAATGGCAGAAGG ACTCAGGAGAAACAGCCAGCCATGGTGGGAATGGCAGAAGG < 41bp 0.827450509369226 0.597684636297714 0.41276127 0.45256045 prediction 0.459531746143024 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65273016 chr1:65273018 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_75166 0 0 2 LIN28A POSTAR2 GSE39873,GSM980594 chr1:65273000-65273020
64251 chr5 154395908 154395908 1 + G T LUSC 154395906 + 154395886 154395926 41 CTAGAGACTGAAATGGAACTCAGGAGTGCTCAGATTGCTGA CTAGAGACTGAAATGGAACTCATGAGTGCTCAGATTGCTGA < 41bp 0.888872476143462 0.659111584897342 0.85001063 0.14837122 prediction 0.45952178249224 Functional Loss - KIF4B ENSG00000226650 CDS Human protein_coding chr5:154395906 chr5:154395908 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_75170 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154395901-154395915
64251 chr13 100635181 100635181 1 + C T BLCA 100635179 + 100635159 100635199 41 CACGAGCTGGTGACACACGTCTCGGTGGAGCACGTCGGCGG CACGAGCTGGTGACACACGTCTTGGTGGAGCACGTCGGCGG < 41bp 0.818376664476946 0.588616648186422 0.30656058 0.37193155 prediction 0.459520032581049 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100635179 chr13:100635181 nonsynonymous SNV 0.677 4 23 hm5C_associated_SNPs_75172 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:100635172-100635211
64251 chr1 91980446 91980446 1 + C T UCEC 91980443 + 91980423 91980463 41 AACAAAAAAGAAGGCTATTTCTACAAAAGTTATGAATAGTG AACAAAAAAGAAGGCTATTTCTATAAAAGTTATGAATAGTG < 41bp 0.732262193207785 0.502503661163496 0.8961963 0.5566459 prediction 0.459517064088578 Functional Loss - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980443 chr1:91980446 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_75175 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:91980440-91980460
64251 chr9 117379536 117379536 1 + G T TGCT 117379534 + 117379514 117379554 41 CCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCCTG CCCATTGCCCCCCTCCTCCCCTTGCTGGAGTGCCCTGCCTG < 41bp 0.729753549653136 0.404289576776462 0.34676012 0.1419949 prediction 0.459507099306272 Functional Loss - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117379534 chr9:117379536 nonsynonymous SNV 0.078 2 23 hm5C_associated_SNPs_75179 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr9:117379513-117379536
64251 chr9 132630354 132630354 1 + C T COAD 132630352 + 132630332 132630372 41 CTCAAGGAGCCGGTGGTGGCCACGGTGGCGCTGACGGAGGC CTCAAGGAGCCGGTGGTGGCCATGGTGGCGCTGACGGAGGC < 41bp 0.817991370117261 0.588245888096857 0.8126607 0.8656386 prediction 0.459490964040808 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132630352 chr9:132630354 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_75184 0 0 4 FMR1 POSTAR2 ENCODE chr9:132630281-132630383
64251 chr17 35872943 35872943 1 + G C UCEC 35872942 + 35872922 35872962 41 ACGTCTATGAGAAGGAGTCCCGACACCTGATGCCTTACTGG ACGTCTATGAGAAGGAGTCCCCACACCTGATGCCTTACTGG < 41bp 0.729742556029585 0.421523167480663 0.5273091 0.42485392 prediction 0.45948511205917 Functional Loss - DUSP14 ENSG00000161326 CDS Human other chr17:35872942 chr17:35872943 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_75186 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:35872928-35872952
64251 chr3 196439352 196439352 1 + G A rs145199963 196439349 + 196439329 196439369 41 TGCGGGCGGCCAGGCCCCTTCCTGCGTCCGCACCTGGCCCC TGCGGGCGGCCAGGCCCCTTCCTACGTCCGCACCTGGCCCC < 41bp 0.729732936943416 0.490170084028488 0.6504323 0.39509994 prediction 0.459465873886833 Functional Loss - PIGX ENSG00000163964 UTR5 Human protein_coding chr3:196439349 chr3:196439352 . . 0 24 hm5C_associated_SNPs_75190 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:196439300-196439360
64251 chr7 100731459 100731459 1 + G A rs558501923 100731456 + 100731436 100731476 41 GGAGGCTGCCGAAGAAGCTGCTCGGGAGAGGCTGGCGGAGC GGAGGCTGCCGAAGAAGCTGCTCAGGAGAGGCTGGCGGAGC < 41bp 0.785637945901288 0.555911564471328 0.28572664 0.2793172 prediction 0.459452762859919 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731456 chr7:100731459 nonsynonymous SNV 0.600 1 24 hm5C_associated_SNPs_75195 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:100731459-100731486
64251 chr17 73221238 73221238 1 + G A UCEC 73221235 + 73221215 73221255 41 GCAGGGCCGGCTGGATGAGGCCCGACAGATGCTCTCCAAGG GCAGGGCCGGCTGGATGAGGCCCAACAGATGCTCTCCAAGG < 41bp 0.777671573279361 0.547954778586754 0.16516188 0.094730884 prediction 0.459433589385214 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73221235 chr17:73221238 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_75198 0 0 4 BUD13 POSTAR2 ENCODE chr17:73221196-73221238
64251 chr17 27068463 27068463 1 + C T STAD 27068461 + 27068441 27068481 41 GTACTCTTGGGGCAAAGGGGCGCGAGGTCGATTGGGAAGGA GTACTCTTGGGGCAAAGGGGCGTGAGGTCGATTGGGAAGGA < 41bp 0.841414098833588 0.61170411934057 0.5117609 0.54551214 prediction 0.459419958986036 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27068461 chr17:27068463 stopgain 0.998 1 23 hm5C_associated_SNPs_75205 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:27068441-27068466
64251 chr10 11894094 11894094 1 + G A UCEC 11894091 + 11894071 11894111 41 GTGGAGATGCCTGTAACCCACCGGAAATCAGACGCATCTGA GTGGAGATGCCTGTAACCCACCGAAAATCAGACGCATCTGA < 41bp 0.774104112125536 0.544397015499707 0.20890087 0.20627916 prediction 0.459414193251659 Functional Loss - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11894091 chr10:11894094 synonymous SNV . 0 24 hm5C_associated_SNPs_75206 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:11894037-11894140
64251 chr11 59828645 59828645 1 + C T CESC 59828643 + 59828623 59828663 41 AAACAACCCCAATGGCCTCCCACGAAGTTGATAATGCAGAG AAACAACCCCAATGGCCTCCCATGAAGTTGATAATGCAGAG < 41bp 0.808879539417215 0.57917406217675 0.15799636 0.21397245 prediction 0.459410954480931 Functional Loss - MS4A3 ENSG00000149516 CDS Human protein_coding chr11:59828643 chr11:59828645 synonymous SNV . 0 23 hm5C_associated_SNPs_75209 0 0 1 DDX3X POSTAR2 ENCODE chr11:59828618-59828722
64251 chr19 39423466 39423466 1 + G A rs147259166 39423463 + 39423443 39423483 41 GCCACTCATGGATTCAAGTCCTGGCTCCGCCTCTTCCATCA GCCACTCATGGATTCAAGTCCTGACTCCGCCTCTTCCATCA < 41bp 0.766471282688374 0.536772863228272 0.34562564 0.13722944 prediction 0.459396838920204 Functional Loss - MRPS12 ENSG00000128626 UTR3 Human protein_coding chr19:39423463 chr19:39423466 . . 0 24 hm5C_associated_SNPs_75211 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:39423420-39423540
64251 chr5 176867757 176867757 1 + G A PAAD 176867754 + 176867734 176867774 41 ATTGAACAGTTCTCTACGGTCAAGGGCGTGGAGCTGGAGCC ATTGAACAGTTCTCTACGGTCAAAGGCGTGGAGCTGGAGCC < 41bp 0.769868486150017 0.540177886804751 0.83191156 0.5051626 prediction 0.459381198690533 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176867754 chr5:176867757 synonymous SNV . 0 24 hm5C_associated_SNPs_75218 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:176867711-176867782
64251 chr18 72998124 72998124 1 + G A rs79904500 72998121 + 72998101 72998141 41 CGGTGCAAAGACTGCAGTGCCGCGTACGACACGCTGGTGGA CGGTGCAAAGACTGCAGTGCCGCATACGACACGCTGGTGGA < 41bp 0.729690542243324 0.488874149474824 0.38588715 0.05241248 prediction 0.459381084486649 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998121 chr18:72998124 synonymous SNV . 0 24 hm5C_associated_SNPs_75219 1 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:72998095-72998137
64251 chr4 145567970 145567970 1 + T C LUAD 145567969 + 145567949 145567989 41 ATGGGAACCCCCCGAAGCGCCTGAAAAGGAGAGACAGGAGG ATGGGAACCCCCCGAAGCGCCCGAAAAGGAGAGACAGGAGG < 41bp 0.748203211621492 0.518514018951693 0.077435166 0.049953967 prediction 0.459378385339598 Functional Loss - HHIP ENSG00000164161 CDS Human protein_coding chr4:145567969 chr4:145567970 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_75221 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:145567970-145567971
64251 chr19 50185273 50185273 1 + G A GBM 50185270 + 50185250 50185290 41 GCTGGACGTCGGCTCGGGCACCGGCATCCTCTGCATGTTTG GCTGGACGTCGGCTCGGGCACCGACATCCTCTGCATGTTTG < 41bp 0.729680151385038 0.487216998139597 0.19858584 0.061967343 prediction 0.459360302770076 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185270 chr19:50185273 nonsynonymous SNV 0.604 5 24 hm5C_associated_SNPs_75230 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:50185220-50185300
64251 chr6 27861471 27861471 1 + G T UCEC 27861468 + 27861448 27861488 41 ATCTTTGAGCGCATCGCTGGCGAGGCTTCCCGCCTGGCGCA ATCTTTGAGCGCATCGCTGGCGATGCTTCCCGCCTGGCGCA < 41bp 0.92270306189237 0.693026778414088 0.90226173 0.0949772 prediction 0.459352566956563 Functional Loss - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861468 chr6:27861471 nonsynonymous SNV 0.812 0 24 hm5C_associated_SNPs_75232 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:27861382-27861480
64251 chr16 3165366 3165366 1 - G A PRAD 3165368 - 3165348 3165388 41 CATTTCCTGATGAGGATGTCCACGATCTGGAACCTAGAAAG CATTTCCTGATGAGGATGTCCATGATCTGGAACCTAGAAAG < 41bp 0.796218236160992 0.566542870585641 0.15727237 0.32088494 prediction 0.459350731150703 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3165368 chr16:3165366 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_75236 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:3165364-3165388
64251 chr19 11024628 11024628 1 + G A UCEC 11024625 + 11024605 11024645 41 AGGTGGAGGAGGTGTCACTCCCCGAGCAGGTGGACATCATC AGGTGGAGGAGGTGTCACTCCCCAAGCAGGTGGACATCATC < 41bp 0.757669110595331 0.527998492215049 0.33805394 0.07415837 prediction 0.459341236760564 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024625 chr19:11024628 nonsynonymous SNV 0.720 2 24 hm5C_associated_SNPs_75238 0 0 3 BUD13 POSTAR2 ENCODE chr19:11024600-11024650
64251 chr2 54014488 54014488 1 + G A UCEC 54014485 + 54014465 54014505 41 GACATCCCTTTCCGAGTCAACTGGCCCGGCACCGAGTTCTC GACATCCCTTTCCGAGTCAACTGACCCGGCACCGAGTTCTC < 41bp 0.729664001257316 0.489983532665076 0.13888735 0.048131853 prediction 0.459328002514632 Functional Loss - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014485 chr2:54014488 stopgain 0.999 1 24 hm5C_associated_SNPs_75242 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:54014465-54014497
64251 chr17 66039284 66039284 1 + G A COAD 66039281 + 66039261 66039301 41 CGCAACAAGAATCCTGCACCCCCGATAGATGCTGTTGAGCA CGCAACAAGAATCCTGCACCCCCAATAGATGCTGTTGAGCA < 41bp 0.729662281097842 0.498239049317955 0.027778894 0.042571634 prediction 0.459324562195685 Functional Loss - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039281 chr17:66039284 synonymous SNV . 0 24 hm5C_associated_SNPs_75245 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:66039280-66039300
64251 chr17 66039283 66039283 1 + C T OV 66039281 + 66039261 66039301 41 CGCAACAAGAATCCTGCACCCCCGATAGATGCTGTTGAGCA CGCAACAAGAATCCTGCACCCCTGATAGATGCTGTTGAGCA < 41bp 0.729662281097842 0.434077176255356 0.027778894 0.043273002 prediction 0.459324562195685 Functional Loss - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66039281 chr17:66039283 nonsynonymous SNV 0.148 1 23 hm5C_associated_SNPs_75246 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:66039280-66039300
64251 chr12 69652685 69652685 1 + T C SKCM 69652684 + 69652664 69652704 41 CACTTGGGCCACCCCTTACACTAGCTCCTCCTCCGCATCTT CACTTGGGCCACCCCTTACACCAGCTCCTCCTCCGCATCTT < 41bp 0.776211936498711 0.546559991076058 0.25003472 0.35448542 prediction 0.459303890845306 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652684 chr12:69652685 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_75254 0 0 17 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:69652642-69652686
64251 chr4 166414410 166414410 1 + G T LUAD 166414407 + 166414387 166414427 41 TCTCCGTGGAAGGAATAGACCACGATGTTACATCCGGTGGG TCTCCGTGGAAGGAATAGACCACTATGTTACATCCGGTGGG < 41bp 0.921038721668932 0.691388238457834 0.18987498 0.13314125 prediction 0.459300966422196 Functional Loss - CPE ENSG00000109472 CDS Human protein_coding chr4:166414407 chr4:166414410 nonsynonymous SNV 0.356 4 24 hm5C_associated_SNPs_75255 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:166414370-166414413
64251 chr17 79973232 79973232 1 + G A BLCA 79973229 + 79973209 79973249 41 CACAAGCACGTGGGGACAGGCCGGGTAGGCTGCCTGGCTCA CACAAGCACGTGGGGACAGGCCGAGTAGGCTGCCTGGCTCA < 41bp 0.771512847817126 0.541869317479806 0.87235534 0.65780795 prediction 0.45928706067464 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79973229 chr17:79973232 synonymous SNV . 0 24 hm5C_associated_SNPs_75261 0 0 5 FAM120A POSTAR2 ENCODE chr17:79973218-79973251
64251 chr6 26022123 26022123 1 + T C BLCA 26022122 + 26022102 26022142 41 GTGATCCGTGACGCTGTCACCTATACGGAGCACGCCAAGCG GTGATCCGTGACGCTGTCACCCATACGGAGCACGCCAAGCG < 41bp 0.730985080299586 0.501343218279035 0.45091903 0.098953724 prediction 0.459283724041103 Functional Loss - HIST1H4A ENSG00000196176 CDS Human other chr6:26022122 chr6:26022123 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_75262 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26021880-26022220
64251 chr14 21960969 21960969 1 + G A rs7617 21960966 + 21960946 21960986 41 CCAGCCACAGTGGTGACCTCCCGGGGGCTCCAACTAGGCCA CCAGCCACAGTGGTGACCTCCCGAGGGCTCCAACTAGGCCA < 41bp 0.781567171438157 0.551931954710869 0.9321834 0.82713187 prediction 0.459270433454576 Functional Loss - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21960966 chr14:21960969 synonymous SNV . 0 24 hm5C_associated_SNPs_75267 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:21960953-21960975
64251 chr4 1807812 1807812 1 + T C OV 1807811 + 1807791 1807831 41 ACCTGGCTGCCCGCAATGTGCTGGTGACCGAGGACAACGTG ACCTGGCTGCCCGCAATGTGCCGGTGACCGAGGACAACGTG < 41bp 0.729634679131356 0.483205897720668 0.22003412 0.2725078 prediction 0.459269358262713 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807811 chr4:1807812 nonsynonymous SNV 0.843 5 22 hm5C_associated_SNPs_75268 0 0 2 EFTUD2 POSTAR2 ENCODE chr4:1807778-1807820
64251 chr17 58740467 58740467 1 + C T HNSC 58740465 + 58740445 58740485 41 AGAGGTTTCAGCTGAGATAGCTCGAGAGAATGTCCAAGGTG AGAGGTTTCAGCTGAGATAGCTTGAGAGAATGTCCAAGGTG < 41bp 0.821904679017007 0.592271424135679 0.23471135 0.17372611 prediction 0.459266509762656 Functional Loss - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58740465 chr17:58740467 stopgain 0.965 0 23 hm5C_associated_SNPs_75270 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:58740443-58740468
64251 chr3 57542849 57542849 1 + T C LIHC 57542848 + 57542828 57542868 41 ACATCGGGCTAAGGCTCAAGCTTCACTGCACCCCAGGCGAT ACATCGGGCTAAGGCTCAAGCCTCACTGCACCCCAGGCGAT < 41bp 0.729630413992271 0.486484959401522 0.016633064 0.021415621 prediction 0.459260827984543 Functional Loss - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542848 chr3:57542849 nonsynonymous SNV 0.926 4 22 hm5C_associated_SNPs_75272 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:57542820-57542851
64251 chr19 45150717 45150717 1 + C T UCEC 45150715 + 45150695 45150735 41 TTCGTGGCAGCCAGACTGGGCGCGGAGCTGCGGAATGCCTC TTCGTGGCAGCCAGACTGGGCGTGGAGCTGCGGAATGCCTC < 41bp 0.729624902836975 0.479420680088122 0.5623252 0.37511674 prediction 0.45924980567395 Functional Loss - PVR ENSG00000073008 CDS Human protein_coding chr19:45150715 chr19:45150717 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_75277 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:45150708-45150744
64251 chr11 47296686 47296686 1 + T C UCEC 47296685 + 47296665 47296705 41 AGCGCCTTCTGGGCAAGAAACTGGGCATCCCTCGAGGCGTA AGCGCCTTCTGGGCAAGAAACCGGGCATCCCTCGAGGCGTA < 41bp 0.729620861506957 0.494281082117909 0.9065738 0.8944122 prediction 0.459241723013914 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47296685 chr11:47296686 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_75280 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:47296683-47296703
64251 chr1 151239676 151239676 1 + G T OV 151239673 + 151239653 151239693 41 AGGATGATTACGACGTGATGCAGGACCCCGAGTTCCTTCAG AGGATGATTACGACGTGATGCAGTACCCCGAGTTCCTTCAG < 41bp 0.925475834094679 0.695855755482266 0.7395831 0.22348216 prediction 0.459240157224826 Functional Loss - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151239673 chr1:151239676 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_75281 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:151239649-151239686
64251 chr12 133727701 133727701 1 + A T SKCM 133727697 + 133727677 133727717 41 ACTGCTCAGCAGATCGTGTACAGAAATGTGATGCTGGAGAA ACTGCTCAGCAGATCGTGTACAGATATGTGATGCTGGAGAA < 41bp 0.874110088002451 0.644491679203227 0.3831554 0.34003595 prediction 0.459236817598448 Functional Loss - ZNF10 ENSG00000090612;ENSG00000256223;ENSG00000256825 CDS Human other chr12:133727697 chr12:133727701 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_75282 0 0 1 ZNF622 POSTAR2 ENCODE chr12:133727613-133727709
64251 chr1 246755005 246755005 1 + G A LAML 246755002 + 246754982 246755022 41 GAAAATCAGCTTGACGGGGACGGGCATGAGCATCTGACCAG GAAAATCAGCTTGACGGGGACGGACATGAGCATCTGACCAG < 41bp 0.729613246548784 0.487746908672385 0.4204448 0.28280482 prediction 0.459226493097567 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246755002 chr1:246755005 synonymous SNV . 0 24 hm5C_associated_SNPs_75285 0 0 1 MTPAP POSTAR2 ENCODE chr1:246754916-246755023
64251 chr3 108394705 108394705 1 + G T UCEC 108394702 + 108394682 108394722 41 ATTGTGGCAGATGTTAGAAACAAGATTGCATTCCTCAGGGT ATTGTGGCAGATGTTAGAAACAATATTGCATTCCTCAGGGT < 41bp 0.729612983453262 0.346061935269412 0.40025946 0.4343441 prediction 0.459225966906524 Functional Loss - DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108394702 chr3:108394705 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_75286 0 0 1 PRPF8 POSTAR2 ENCODE chr3:108394695-108394752
64251 chr6 42658866 42658866 1 + G T COAD 42658864 + 42658844 42658884 41 CAGAGGAAATTGGACATGCACAGGAAGCCAATCAGACACTG CAGAGGAAATTGGACATGCACATGAAGCCAATCAGACACTG < 41bp 0.729611691010313 0.425161094832136 0.63207823 0.11442295 prediction 0.459223382020625 Functional Loss - UBR2 ENSG00000024048 CDS Human protein_coding chr6:42658864 chr6:42658866 nonsynonymous SNV 0.956 3 23 hm5C_associated_SNPs_75287 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr6:42658866-42658867
64251 chr6 36566754 36566754 1 + G A UCS 36566751 + 36566731 36566771 41 TCGTAGGAGGAGTCCTCCACCTCGTCGCAGGTACTTGAGAG TCGTAGGAGGAGTCCTCCACCTCATCGCAGGTACTTGAGAG < 41bp 0.731473182105942 0.501864728931255 0.34958375 0.28299314 prediction 0.459216906349375 Functional Loss - SRSF3 ENSG00000112081 CDS Human protein_coding chr6:36566751 chr6:36566754 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_75290 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:36566724-36566760
64251 chr22 39884097 39884097 1 + C T COAD 39884095 + 39884075 39884115 41 CTTCACGGCTTATGGGGAGCCGCGGCCGCTCAAGTTCCGGG CTTCACGGCTTATGGGGAGCCGTGGCCGCTCAAGTTCCGGG < 41bp 0.811168688243865 0.581562151086075 0.5555886 0.3653611 prediction 0.45921307431558 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884095 chr22:39884097 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75292 0 0 1 METAP2 POSTAR2 ENCODE chr22:39884061-39884102
64251 chr6 155574156 155574156 1 - C T UCEC 155574159 - 155574139 155574179 41 TTCCCCAGTCTGACTTGAAGCGCGGAGATGGGGATCAACCA TTCCCCAGTCTGACTTGAAGCGCAGAGATGGGGATCAACCA < 41bp 0.742807934216299 0.513203519462244 0.13152575 0.043079466 prediction 0.45920882950811 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155574159 chr6:155574156 synonymous SNV . 0 24 hm5C_associated_SNPs_75293 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:155574137-155574158
64251 chr17 25952289 25952289 1 + G A rs1807183 25952286 + 25952266 25952306 41 ATGTCAGCTCAGCCGTCCAACTGGGAGGAACAGTAGGCTCA ATGTCAGCTCAGCCGTCCAACTGAGAGGAACAGTAGGCTCA < 41bp 0.764108633421846 0.534508673764864 0.85882527 0.76153505 prediction 0.459199919313964 Functional Loss - KSR1;LGALS9 ENSG00000141068 UTR3 Human protein_coding chr17:25952286 chr17:25952289 . . 0 24 hm5C_associated_SNPs_75296 0 0 2 EIF3H POSTAR2 ENCODE chr17:25952249-25952349
64251 chr7 89982168 89982168 1 + G T LUSC 89982165 + 89982145 89982185 41 GATAAGCTAAGACTCTTCACCAGGGGAGGATCCGGTGGAAT GATAAGCTAAGACTCTTCACCAGTGGAGGATCCGGTGGAAT < 41bp 0.729598429581784 0.345285569838197 0.90289974 0.25802332 prediction 0.459196859163567 Functional Loss - GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:89982165 chr7:89982168 nonsynonymous SNV 0.665 0 24 hm5C_associated_SNPs_75299 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:89982148-89982172
64251 chr17 26370220 26370220 1 + A T THYM 26370216 + 26370196 26370236 41 GGGGCAGGCTCCTGGACCAGCTGCAGCAGCCCCAGCTCAGG GGGGCAGGCTCCTGGACCAGCTGCTGCAGCCCCAGCTCAGG < 41bp 0.893562585895013 0.663966451757733 0.7122293 0.71948665 prediction 0.45919226827456 Functional Loss - NLK ENSG00000087095 CDS Human protein_coding chr17:26370216 chr17:26370220 synonymous SNV . 0 25 hm5C_associated_SNPs_75300 0 0 4 GEMIN5 POSTAR2 ENCODE chr17:26370179-26370223
64251 chr16 67197172 67197172 1 + C T UCEC 67197170 + 67197150 67197190 41 CGAGCTACTGGAGGCCTGCCCGCGCCTGCGCGCTCTCGGCC CGAGCTACTGGAGGCCTGCCCGTGCCTGCGCGCTCTCGGCC < 41bp 0.729591777753755 0.489353232163439 0.91915274 0.67504805 prediction 0.459183555507509 Functional Loss - FBXL8 ENSG00000135722 CDS Human protein_coding chr16:67197170 chr16:67197172 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_75304 0 0 2 RBM15 POSTAR2 ENCODE chr16:67197110-67197192
64251 chr10 75541845 75541845 1 + C T SKCM 75541843 + 75541823 75541863 41 CTTGGTGCGCTATGGCGACACCCAGCCTGCGGGGTCGTCTG CTTGGTGCGCTATGGCGACACCTAGCCTGCGGGGTCGTCTG < 41bp 0.756549400415315 0.526960354016693 0.1338113 0.15968665 prediction 0.459178092797244 Functional Loss - CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75541843 chr10:75541845 synonymous SNV . 0 23 hm5C_associated_SNPs_75306 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:75541800-75541880
64251 chr6 43488442 43488442 1 + G A STAD 43488439 + 43488419 43488459 41 GACATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGA GACATCACCCTGCTTGAGCCCGTAGAAGGGGAGGCAGCTGA < 41bp 0.7576046115011 0.528038314389804 0.3625831 0.17819458 prediction 0.459132594222593 Functional Loss - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488439 chr6:43488442 synonymous SNV . 0 24 hm5C_associated_SNPs_75322 0 0 1 ZRANB2 POSTAR2 ENCODE chr6:43488433-43488495
64251 chr19 578966 578966 1 + G A rs543561666 578963 + 578943 578983 41 GATGGTCTCGATCTCCCGACCTCGAGATCCACCCGCCTTGG GATGGTCTCGATCTCCCGACCTCAAGATCCACCCGCCTTGG < 41bp 0.729560910733303 0.498235051483212 0.58853334 0.045263708 prediction 0.459121821466606 Functional Loss - BSG ENSG00000172270 intronic Human protein_coding chr19:578963 chr19:578966 . . 0 24 hm5C_associated_SNPs_75324 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:578958-578990
64251 chr11 1009762 1009762 1 + C T COAD 1009760 + 1009740 1009780 41 GTGGGAGCTGGAATCATCCACACGAAAACCACCCAGATTGG GTGGGAGCTGGAATCATCCACATGAAAACCACCCAGATTGG < 41bp 0.729560620762889 0.453514094444193 0.32884994 0.348253 prediction 0.459121241525779 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:1009760 chr11:1009762 nonsynonymous SNV 0.989 2 23 hm5C_associated_SNPs_75325 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:1009750-1009775
64251 chr1 154229710 154229710 1 + C T UCEC 154229708 + 154229688 154229728 41 CTCCACTGTCACAGCCTCGACTCGAAGCTCAGTTGCTACGA CTCCACTGTCACAGCCTCGACTTGAAGCTCAGTTGCTACGA < 41bp 0.844728465657334 0.61517167301744 0.9175476 0.18392444 prediction 0.459113585279789 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229708 chr1:154229710 stopgain 1.000 0 23 hm5C_associated_SNPs_75332 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:154229684-154229719
64251 chr8 144732870 144732870 1 + G A UCEC 144732867 + 144732847 144732887 41 GGGAAATCCTTCATAAGGAGCTCGAGCCTCATTCGCCATTA GGGAAATCCTTCATAAGGAGCTCAAGCCTCATTCGCCATTA < 41bp 0.773035161658169 0.543480158027735 0.30605912 0.15972137 prediction 0.459110007260868 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732867 chr8:144732870 synonymous SNV . 0 24 hm5C_associated_SNPs_75333 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:144732849-144732872
64251 chr17 26646322 26646322 1 + C T BLCA 26646320 + 26646300 26646340 41 GGCTGCTGGGCCTCTACTTCCTCAGCCACATCCCCATCACC GGCTGCTGGGCCTCTACTTCCTTAGCCACATCCCCATCACC < 41bp 0.76665134080027 0.537098894781387 0.24870506 0.12373808 prediction 0.459104892037766 Functional Loss - TMEM97 ENSG00000109084 CDS Human protein_coding chr17:26646320 chr17:26646322 stopgain 0.864 0 23 hm5C_associated_SNPs_75335 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:26646293-26646343
64251 chr19 17837059 17837059 1 + T C KIRC 17837058 + 17837038 17837078 41 TGGACCGCGTGGATGCCGTGCTGGTGACCCACCCTGGCGCC TGGACCGCGTGGATGCCGTGCCGGTGACCCACCCTGGCGCC < 41bp 0.731244255195821 0.501694725096742 0.63431835 0.8501942 prediction 0.459099060198158 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837058 chr19:17837059 nonsynonymous SNV 0.081 3 22 hm5C_associated_SNPs_75339 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:17837046-17837066
64251 chr19 57865133 57865133 1 + G T LUAD 57865130 + 57865110 57865150 41 GGATGTGTTCGTGTACTTCTCTCGGGAGGAGTGGGAACTCC GGATGTGTTCGTGTACTTCTCTCTGGAGGAGTGGGAACTCC < 41bp 0.928118377867744 0.698583342910747 0.23095688 0.2800197 prediction 0.459070069913995 Functional Loss - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57865130 chr19:57865133 nonsynonymous SNV 0.950 0 24 hm5C_associated_SNPs_75344 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:57865097-57865147
64251 chr1 2116115 2116115 1 - G A ESCA 2116117 - 2116097 2116137 41 TCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTG TCATCGTCTGGGGTCAGCTGCATGGGCTCGCTGGTGAACTG < 41bp 0.768590421409415 0.539056064050341 0.878437 0.84269094 prediction 0.459068714718149 Functional Loss - PRKCZ ENSG00000067606 CDS Human protein_coding chr1:2116117 chr1:2116115 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75345 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:2116114-2116143
64251 chr19 36279064 36279064 1 + C T KIRP 36279062 + 36279042 36279082 41 ACCCCCGAAGCCGTTCAGATCCCGGTCCCCCAGTCCCCCGC ACCCCCGAAGCCGTTCAGATCCTGGTCCCCCAGTCCCCCGC < 41bp 0.759458666235164 0.529924779687373 0.688993 0.47852096 prediction 0.459067773095582 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279062 chr19:36279064 synonymous SNV . 0 23 hm5C_associated_SNPs_75347 0 0 7 DDX59 POSTAR2 ENCODE chr19:36279037-36279113
64251 chr17 42226180 42226180 1 + C T LUAD 42226178 + 42226158 42226198 41 GACTAGCTCTGGATTATTTCCTCGGATACCCTTACAACCGC GACTAGCTCTGGATTATTTCCTTGGATACCCTTACAACCGC < 41bp 0.820255653363045 0.590721861645419 0.45075557 0.20412472 prediction 0.459067583435252 Functional Loss - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42226178 chr17:42226180 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_75348 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42226105-42226196
64251 chr15 41192186 41192186 1 + C T UCEC 41192184 + 41192164 41192204 41 AGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGA AGCGGGCTGTCTTCCGCTACCATGTGCAACGGGAGGCCCGA < 41bp 0.816564495912439 0.587031804369939 0.22559142 0.23703295 prediction 0.459065383084999 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192184 chr15:41192186 synonymous SNV . 0 23 hm5C_associated_SNPs_75349 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr11 117117545 117117545 1 + G T UCEC 117117543 + 117117523 117117563 41 AGGAGATATTAAAGGCTATTCAGGATGTGACAATAAAGCGG AGGAGATATTAAAGGCTATTCATGATGTGACAATAAAGCGG < 41bp 0.729527695062076 0.426587511631977 0.55137366 0.29804677 prediction 0.459055390124151 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117117543 chr11:117117545 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_75351 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr11:117117537-117117552
64251 chr7 107557805 107557805 1 + T C UCEC 107557804 + 107557784 107557824 41 TATCTGTGTTGAAGGAATGGCTGGTGGTGCTGTGCACATTG TATCTGTGTTGAAGGAATGGCCGGTGGTGCTGTGCACATTG < 41bp 0.729527646662538 0.495618836411203 0.08741504 0.0913592 prediction 0.459055293325077 Functional Loss - DLD ENSG00000091140 CDS Human protein_coding chr7:107557804 chr7:107557805 synonymous SNV . 0 22 hm5C_associated_SNPs_75352 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:107557785-107557821
64251 chr16 31213958 31213958 1 - C T ACC 31213961 - 31213941 31213981 41 GCGCTGGAGAACCTGACCGCCGAGGAGCTCAAGAAGTTCAA GCGCTGGAGAACCTGACCGCCGAAGAGCTCAAGAAGTTCAA < 41bp 0.72952082045446 0.498901664225615 0.4209377 0.23322153 prediction 0.459041640908921 Functional Loss - PYCARD ENSG00000103490;ENSG00000261359 CDS Human other chr16:31213961 chr16:31213958 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_75353 0 0 1 DDX3X POSTAR2 ENCODE chr16:31213941-31214065
64251 chr22 33254032 33254032 1 + G A UCEC 33254029 + 33254009 33254049 41 GTCTATGATGGCAAGATGTACACGGGGCTGTGCAACTTCGT GTCTATGATGGCAAGATGTACACAGGGCTGTGCAACTTCGT < 41bp 0.7295202329871 0.489461219614274 0.15574682 0.03928733 prediction 0.4590404659742 Functional Loss - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33254029 chr22:33254032 synonymous SNV . 0 24 hm5C_associated_SNPs_75354 0 0 3 RPS3 POSTAR2 ENCODE chr22:33254026-33254096
64251 chr22 33254031 33254031 1 + C T UCEC 33254029 + 33254009 33254049 41 GTCTATGATGGCAAGATGTACACGGGGCTGTGCAACTTCGT GTCTATGATGGCAAGATGTACATGGGGCTGTGCAACTTCGT < 41bp 0.7295202329871 0.453694541287425 0.15574682 0.14714244 prediction 0.4590404659742 Functional Loss - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33254029 chr22:33254031 nonsynonymous SNV 0.867 5 23 hm5C_associated_SNPs_75355 0 0 3 RPS3 POSTAR2 ENCODE chr22:33254026-33254096
64251 chr19 46206208 46206208 1 + G A STAD 46206205 + 46206185 46206225 41 TCCACGCCCTTCCCTGCTGTCTGGCACACCCCTGCGGACAC TCCACGCCCTTCCCTGCTGTCTGACACACCCCTGCGGACAC < 41bp 0.729517844406328 0.490960126860907 0.48853412 0.33291715 prediction 0.459035688812656 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46206205 chr19:46206208 stopgain 0.878 1 24 hm5C_associated_SNPs_75360 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163974 chr19:46206208-46206209
64251 chr9 139694931 139694931 1 + G A GBM 139694928 + 139694908 139694948 41 ACCTGCTGTATTTGGACCTGCTGGATTATCTGAAGACAGTG ACCTGCTGTATTTGGACCTGCTGAATTATCTGAAGACAGTG < 41bp 0.775552099274407 0.546036203162092 0.12858039 0.10000548 prediction 0.45903179222463 Functional Loss - CCDC183 ENSG00000213213;ENSG00000272896 CDS Human other chr9:139694928 chr9:139694931 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_75362 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:139694898-139694933
64251 chr15 99671178 99671178 1 + G T UCEC 99671176 + 99671156 99671196 41 CTTGGCAGGATGAAATCGTGCAGGGGACTCGAAGGAGGACA CTTGGCAGGATGAAATCGTGCATGGGACTCGAAGGAGGACA < 41bp 0.729512726868964 0.364606724626014 0.7509979 0.2797194 prediction 0.459025453737929 Functional Loss - SYNM ENSG00000182253 CDS Human protein_coding chr15:99671176 chr15:99671178 nonsynonymous SNV 0.385 2 23 hm5C_associated_SNPs_75364 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:99671148-99671182
64251 chr19 58899511 58899511 1 + G C HNSC 58899510 + 58899490 58899530 41 TCACCCTGTCCCAGGATGACCGAGTGGGAGACAGCAGCACC TCACCCTGTCCCAGGATGACCCAGTGGGAGACAGCAGCACC < 41bp 0.729510322334642 0.411661122625887 0.34835345 0.35009933 prediction 0.459020644669284 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58899510 chr19:58899511 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_75365 0 0 17 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:58899500-58899520
64251 chr3 149678729 149678729 1 + A T LUSC 149678725 + 149678705 149678745 41 CCAGTCATTTGGGGCTTTATCGGAATCCCGCTCACATCAGA CCAGTCATTTGGGGCTTTATCGGATTCCCGCTCACATCAGA < 41bp 0.861692124536273 0.632182530997598 0.934528 0.93013984 prediction 0.45901918707735 Functional Loss - RNF13 ENSG00000082996 CDS Human protein_coding chr3:149678725 chr3:149678729 nonsynonymous SNV 0.593 1 25 hm5C_associated_SNPs_75367 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr3:149678710-149678742
64251 chr7 129093175 129093175 1 + C T SKCM 129093172 + 129093152 129093192 41 TCTCCACCTTCCTGGAGCTACTCCACATGGAAATTGAGTGA TCTCCACCTTCCTGGAGCTACTCTACATGGAAATTGAGTGA < 41bp 0.729508938209459 0.499439619185929 0.93568623 0.9039887 prediction 0.459017876418917 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129093172 chr7:129093175 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75368 0 0 4 DDX24 POSTAR2 ENCODE chr7:129093084-129093189
64251 chr5 126860372 126860372 1 + C T GBM 126860370 + 126860350 126860390 41 TCCTGCAGTTCCTTCTGTCCCACCACTTGTTACTTCTATGC TCCTGCAGTTCCTTCTGTCCCATCACTTGTTACTTCTATGC < 41bp 0.813015056684017 0.583507462944341 0.05367446 0.15307122 prediction 0.459015187479352 Functional Loss - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126860370 chr5:126860372 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_75371 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:126860340-126860377
64251 chr7 100730795 100730795 1 + G C ESCA 100730794 + 100730774 100730814 41 GAGACAGTGCCTGTGCCGCCCGAGGGTGTGGCCTCCTTCAA GAGACAGTGCCTGTGCCGCCCCAGGGTGTGGCCTCCTTCAA < 41bp 0.875584074780889 0.646078503681226 0.90220404 0.7049013 prediction 0.459011142199325 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730794 chr7:100730795 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_75372 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100730769-100730814
64251 chr17 80436695 80436695 1 + G A rs149086254 80436692 + 80436672 80436712 41 CCAGGCTGGGTCCGATACGCCGAGCGGGTGCTGGGTCGCCC CCAGGCTGGGTCCGATACGCCGAACGGGTGCTGGGTCGCCC < 41bp 0.784435649890976 0.554933446897317 0.7760729 0.2465398 prediction 0.459004405987317 Functional Loss - NARF ENSG00000141562 CDS Human protein_coding chr17:80436692 chr17:80436695 synonymous SNV . 0 24 hm5C_associated_SNPs_75374 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:80436694-80436695
64251 chr15 41100015 41100015 1 + G A KIRP 41100012 + 41099992 41100032 41 CCTGCGGTGCTGGGAGCCACCATGGAGAGTAGGTGCTACGG CCTGCGGTGCTGGGAGCCACCATAGAGAGTAGGTGCTACGG < 41bp 0.729499280514074 0.486321192516267 0.17170471 0.13277578 prediction 0.458998561028148 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41100012 chr15:41100015 stopgain 0.977 2 24 hm5C_associated_SNPs_75376 0 0 7 BUD13 POSTAR2 ENCODE chr15:41099926-41100037
64251 chr9 132897543 132897543 1 + C T rs73541567 132897541 + 132897521 132897561 41 ACATGGCTGGAGCACAGTGCCGCGGAAACCTGATTTTGTAC ACATGGCTGGAGCACAGTGCCGTGGAAACCTGATTTTGTAC < 41bp 0.77464603250804 0.545148939330334 0.39905572 0.37434042 prediction 0.458994186355412 Functional Loss - GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132897541 chr9:132897543 . . 0 23 hm5C_associated_SNPs_75378 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:132897530-132897552
64251 chr5 43161948 43161948 1 + T C LIHC 43161947 + 43161927 43161967 41 AGTCAGTAAGAAGCAAAGAACTGGGAAAAAAATTCATGTAT AGTCAGTAAGAAGCAAAGAACCGGGAAAAAAATTCATGTAT < 41bp 0.729496346097496 0.498598050267629 0.36918014 0.9034648 prediction 0.458992692194991 Functional Loss - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43161947 chr5:43161948 synonymous SNV . 0 22 hm5C_associated_SNPs_75379 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr5:43161940-43161960
64251 chr17 36891515 36891515 1 - C A UCEC 36891518 - 36891498 36891538 41 TCCTCCACCAGCAGGGGGCGCAAGATGACTGTCAACGGCGC TCCTCCACCAGCAGGGGGCGCAATATGACTGTCAACGGCGC < 41bp 0.729495373315949 0.3375385539436 0.51040477 0.3096128 prediction 0.458990746631898 Functional Loss - PCGF2 ENSG00000056661 CDS Human other chr17:36891518 chr17:36891515 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_75381 0 0 4 CELF2 POSTAR2 GSE71264,GSM1831633 chr17:36891500-36891520
64251 chr1 162535885 162535885 1 + G A BLCA 162535882 + 162535862 162535902 41 AACATTAATGACCTCAAACTCACGTTGTCCAAAGCTGGGCA AACATTAATGACCTCAAACTCACATTGTCCAAAGCTGGGCA < 41bp 0.746829264306425 0.517341836613557 0.092225194 0.016599178 prediction 0.458974855385735 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162535882 chr1:162535885 synonymous SNV . 0 24 hm5C_associated_SNPs_75382 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:162535861-162535890
64251 chr17 12028638 12028638 1 + C T ESCA 12028636 + 12028616 12028656 41 AAGAATAGACCCAAGCGCATCACGACAAGGATATGATGTCC AAGAATAGACCCAAGCGCATCATGACAAGGATATGATGTCC < 41bp 0.729486731416652 0.433515809031532 0.01791498 0.03089407 prediction 0.458973462833304 Functional Loss - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12028636 chr17:12028638 stopgain 0.995 1 23 hm5C_associated_SNPs_75384 0 0 1 BUD13 POSTAR2 ENCODE chr17:12028560-12028718
64251 chr17 12028639 12028639 1 + G A UCEC 12028636 + 12028616 12028656 41 AAGAATAGACCCAAGCGCATCACGACAAGGATATGATGTCC AAGAATAGACCCAAGCGCATCACAACAAGGATATGATGTCC < 41bp 0.729486731416652 0.497120141581165 0.01791498 0.032816052 prediction 0.458973462833304 Functional Loss - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12028636 chr17:12028639 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_75385 0 0 1 BUD13 POSTAR2 ENCODE chr17:12028560-12028718
64251 chr14 38170629 38170629 1 + G A UCEC 38170626 + 38170606 38170646 41 TGTTGACTTGCGCCTGGCTTCTCGAGTGTATCACACTGCTA TGTTGACTTGCGCCTGGCTTCTCAAGTGTATCACACTGCTA < 41bp 0.73328280633625 0.503805726420887 0.8825789 0.6444057 prediction 0.458954159830726 Functional Loss - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38170626 chr14:38170629 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_75390 0 0 2 GRWD1 POSTAR2 ENCODE chr14:38170576-38170657
64251 chr12 7050052 7050052 1 + C T UCEC 7050050 + 7050030 7050070 41 CTCTGCCCTCCAGCCTCTGCCTCGGTGCACCCTCTCATTGA CTCTGCCCTCCAGCCTCTGCCTTGGTGCACCCTCTCATTGA < 41bp 0.72947644385376 0.448572513035 0.17410746 0.07345322 prediction 0.45895288770752 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7050050 chr12:7050052 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_75391 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7050039-7050066
64251 chr8 19694617 19694617 1 + G T UCEC 19694614 + 19694594 19694634 41 GCTACATGGTACTCCCCATTCAAGATGGAGGCAAATCCCAG GCTACATGGTACTCCCCATTCAATATGGAGGCAAATCCCAG < 41bp 0.921434458796736 0.69196047389223 0.2845692 0.11338267 prediction 0.458947969809011 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19694614 chr8:19694617 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_75393 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:19694594-19694617
64251 chr16 19194968 19194968 1 + C T STAD 19194966 + 19194946 19194986 41 TGCTCAGACGGACCTATAACCCCGACGACTATTTCAGGAAG TGCTCAGACGGACCTATAACCCTGACGACTATTTCAGGAAG < 41bp 0.729463273453396 0.43938469043843 0.45610505 0.30151874 prediction 0.458926546906792 Functional Loss - SYT17 ENSG00000103528 CDS Human protein_coding chr16:19194966 chr16:19194968 synonymous SNV . 0 23 hm5C_associated_SNPs_75398 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:19194929-19194968
64251 chr3 160474291 160474291 1 + G T UCEC 160474288 + 160474268 160474308 41 ATGGTGAAGGGCAAGGTAGCCGAGATCATGCAGAACGATCG ATGGTGAAGGGCAAGGTAGCCGATATCATGCAGAACGATCG < 41bp 0.838367260235849 0.608906828921298 0.6810526 0.18072325 prediction 0.458920862629103 Functional Loss - PPM1L ENSG00000163590 CDS Human protein_coding chr3:160474288 chr3:160474291 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_75400 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:160474272-160474293
64251 chr2 63832498 63832498 1 + G A STAD 63832495 + 63832475 63832515 41 CTGCAAAAGCCATCTGTGACCACGTCAGGGACATCTGGTTT CTGCAAAAGCCATCTGTGACCACATCAGGGACATCTGGTTT < 41bp 0.731360456734886 0.50190212865348 0.21968085 0.42593694 prediction 0.458916656162811 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63832495 chr2:63832498 nonsynonymous SNV 0.890 0 24 hm5C_associated_SNPs_75401 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63832451-63832522
64251 chr17 1946300 1946300 1 + G A UCEC 1946297 + 1946277 1946317 41 TGCAACTGGCCAGCCAATTTCCCGGAGCCATCACCCTCACC TGCAACTGGCCAGCCAATTTCCCAGAGCCATCACCCTCACC < 41bp 0.758672378147996 0.52921597460455 0.50077516 0.21071765 prediction 0.458912807086892 Functional Loss - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946297 chr17:1946300 nonsynonymous SNV 0.749 1 24 hm5C_associated_SNPs_75402 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:1946268-1946305
64251 chrX 106034405 106034405 1 + G T LUAD 106034402 + 106034382 106034422 41 TCGCAGCGAGACCGCATCATCTGGATATGCTTCAGTACAGG TCGCAGCGAGACCGCATCATCTGTATATGCTTCAGTACAGG < 41bp 0.922792169300105 0.693342017973712 0.42237628 0.100889325 prediction 0.458900302652785 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:106034402 chrX:106034405 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_75409 0 0 4 GRWD1 POSTAR2 ENCODE chrX:106034313-106034458
64251 chr7 141478567 141478567 1 + G A UCEC 141478564 + 141478544 141478584 41 TTGTGTTTCATGTTTTTGGACTCGAGCAGTGTCTGGTTTGT TTGTGTTTCATGTTTTTGGACTCAAGCAGTGTCTGGTTTGT < 41bp 0.732156254393147 0.502709055120836 0.2036041 0.13772354 prediction 0.458894398544621 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478564 chr7:141478567 synonymous SNV . 0 24 hm5C_associated_SNPs_75410 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:141478510-141478575
64251 chr2 175263070 175263070 1 + G T UCEC 175263068 + 175263048 175263088 41 CCTCCAGCAACAGTCGATAACAGGATTATTTTTGGAAAAAA CCTCCAGCAACAGTCGATAACATGATTATTTTTGGAAAAAA < 41bp 0.885731624240113 0.656287573169727 0.9311163 0.230254 prediction 0.458888102140772 Functional Loss - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175263068 chr2:175263070 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_75411 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:175263037-175263073
64251 chr10 124268215 124268215 1 + G T COAD 124268212 + 124268192 124268232 41 TAACACTTTGAAAGTGACAGCTGGAATCTCCTTTGCAATCC TAACACTTTGAAAGTGACAGCTGTAATCTCCTTTGCAATCC < 41bp 0.729443064164897 0.337875081835736 0.16415462 0.09207058 prediction 0.458886128329795 Functional Loss - HTRA1 ENSG00000166033 CDS Human protein_coding chr10:124268212 chr10:124268215 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_75412 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:124268201-124268228
64251 chr2 192194747 192194747 1 + G A BLCA 192194744 + 192194724 192194764 41 CATTACTGGGGAAAGTGGAGCAGGAAAAACAGGTAAGGCTC CATTACTGGGGAAAGTGGAGCAGAAAAAACAGGTAAGGCTC < 41bp 0.739471872227315 0.510033642838894 0.9158665 0.8484682 prediction 0.458876458776841 Functional Loss - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192194744 chr2:192194747 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_75415 0 0 3 BUD13 POSTAR2 ENCODE chr2:192194718-192194781
64251 chr13 113536261 113536261 1 + G A rs115526941 113536258 + 113536238 113536278 41 CACTCTCAGCAGGTGACACTCGCGGCCTGGAAGGAGAAGGT CACTCTCAGCAGGTGACACTCGCAGCCTGGAAGGAGAAGGT < 41bp 0.74643772037969 0.517005118227103 0.8926505 0.23802915 prediction 0.458865204305173 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536258 chr13:113536261 synonymous SNV . 0 24 hm5C_associated_SNPs_75416 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:113536233-113536266
64251 chr1 20230884 20230884 1 + G A UCEC 20230881 + 20230861 20230901 41 CCAGAAAGTTTGTAATGCAACTGGATGTTCAGTTAGTATTT CCAGAAAGTTTGTAATGCAACTGAATGTTCAGTTAGTATTT < 41bp 0.751785047926181 0.52235408848499 0.1756095 0.12631837 prediction 0.458861918882382 Functional Loss - OTUD3 ENSG00000169914 CDS Human protein_coding chr1:20230881 chr1:20230884 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_75418 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:20230873-20230893
64251 chr3 49569108 49569108 1 + T C BLCA 49569107 + 49569087 49569127 41 CCTAGGCCCCATCCAGCCTACTCGGGTGTCAGAAGCTGGCA CCTAGGCCCCATCCAGCCTACCCGGGTGTCAGAAGCTGGCA < 41bp 0.782907066465726 0.553478858891527 0.093110174 0.08102411 prediction 0.4588564151484 Functional Loss - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569107 chr3:49569108 synonymous SNV . 0 22 hm5C_associated_SNPs_75419 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49569028-49569117
64251 chr19 44470960 44470960 1 + C T COAD 44470958 + 44470938 44470978 41 GAAGGGATTTTATACAAATTCACGACGATCTTCCCATCAGA GAAGGGATTTTATACAAATTCATGACGATCTTCCCATCAGA < 41bp 0.818668287294561 0.589241526125352 0.025809228 0.01777196 prediction 0.458853522338419 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470958 chr19:44470960 stopgain 0.002 0 23 hm5C_associated_SNPs_75421 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:44470934-44470977
64251 chr12 56109844 56109844 1 + G A LUAD 56109841 + 56109821 56109861 41 CAGCGGTCACGTGACATGGCCCCGGGGAGCCGAGGTGAGCG CAGCGGTCACGTGACATGGCCCCAGGGAGCCGAGGTGAGCG < 41bp 0.768713631680867 0.539304824874799 0.30082956 0.2940668 prediction 0.458817613612137 Functional Loss - BLOC1S1 ENSG00000135441;ENSG00000258311 CDS Human other chr12:56109841 chr12:56109844 synonymous SNV . 0 24 hm5C_associated_SNPs_75428 0 0 2 DDX3X POSTAR2 ENCODE chr12:56109836-56109921
64251 chr10 98741280 98741280 1 + G T LUAD 98741278 + 98741258 98741298 41 ATCAGAAGAGGCTTGGAACTCAGGGTTTATGGGGAACTCAT ATCAGAAGAGGCTTGGAACTCATGGTTTATGGGGAACTCAT < 41bp 0.729407694663772 0.405415216825145 0.91479445 0.4735957 prediction 0.458815389327543 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98741278 chr10:98741280 nonsynonymous SNV 0.978 2 23 hm5C_associated_SNPs_75430 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:98741232-98741321
64251 chr5 179146718 179146718 1 + G A rs140056120 179146715 + 179146695 179146735 41 CAGATGAAGAGGCCACAAAACCCGAAGGCTGGTTAGATGAT CAGATGAAGAGGCCACAAAACCCAAAGGCTGGTTAGATGAT < 41bp 0.730050039924769 0.500650692813611 0.39331833 0.2322925 prediction 0.458798694222315 Functional Loss - CANX ENSG00000127022 CDS Human protein_coding chr5:179146715 chr5:179146718 nonsynonymous SNV 0.938 2 24 hm5C_associated_SNPs_75437 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:179146690-179146718
64251 chr6 170700107 170700107 1 + C T rs61733633 170700105 + 170700085 170700125 41 TCTGGTCTGTTTGCAGAGATCTCGGCTCACCAAATTCCACA TCTGGTCTGTTTGCAGAGATCTTGGCTCACCAAATTCCACA < 41bp 0.824985885882055 0.595589443502382 0.05355251 0.0288513 prediction 0.458792884759346 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170700105 chr6:170700107 nonsynonymous SNV 0.986 0 23 hm5C_associated_SNPs_75438 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:170700083-170700115
64251 chr19 10201949 10201949 1 + G A CESC 10201946 + 10201926 10201966 41 GTATCCCGGTGCCGGAAATGCCGGAAGCGCTACGAGCCAGT GTATCCCGGTGCCGGAAATGCCGAAAGCGCTACGAGCCAGT < 41bp 0.782949773921062 0.553553662455646 0.9103745 0.7652123 prediction 0.458792222930831 Functional Loss - C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10201946 chr19:10201949 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_75439 0 0 4 GRWD1 POSTAR2 ENCODE chr19:10201923-10201977
64251 chr11 65088450 65088450 1 + G A HNSC 65088447 + 65088427 65088467 41 AAGCTTCGGGACCTGCTGTCCTCGGACATGATCAGCCCACC AAGCTTCGGGACCTGCTGTCCTCAGACATGATCAGCCCACC < 41bp 0.756005113793177 0.526609169469014 0.5824424 0.47548798 prediction 0.458791888648325 Functional Loss - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088447 chr11:65088450 synonymous SNV . 0 24 hm5C_associated_SNPs_75441 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65088441-65088498
64251 chr20 35125219 35125219 1 + A C UCEC 35125215 + 35125195 35125235 41 AGAGCAGTACTGAGTCTGCCCAGGACACCTACCTGGACAGC AGAGCAGTACTGAGTCTGCCCAGGCCACCTACCTGGACAGC < 41bp 0.729394530123317 0.320240414258405 0.88657784 0.86904633 prediction 0.458789060246634 Functional Loss - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35125215 chr20:35125219 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_75444 0 0 3 IGF2BP1 POSTAR2 ENCODE chr20:35125178-35125250
64251 chr4 41984044 41984044 1 + G A UCEC 41984041 + 41984021 41984061 41 GCGACCGATTTAACTTCATTCTGGCGAGTACCAACAGCGAC GCGACCGATTTAACTTCATTCTGACGAGTACCAACAGCGAC < 41bp 0.741178075919138 0.511788416266227 0.35966426 0.2489146 prediction 0.458779319305822 Functional Loss - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984041 chr4:41984044 nonsynonymous SNV 0.143 2 24 hm5C_associated_SNPs_75448 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:41984025-41984047
64251 chr22 41622690 41622690 1 + G T SKCM 41622688 + 41622668 41622708 41 TATGAGGCACAGACTTTCAACTGGGAGAACTACTTGGAGAA TATGAGGCACAGACTTTCAACTTGGAGAACTACTTGGAGAA < 41bp 0.7293868185641 0.386990623490047 0.8975308 0.42167383 prediction 0.4587736371282 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41622688 chr22:41622690 nonsynonymous SNV 0.840 4 23 hm5C_associated_SNPs_75449 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:41622669-41622704
64251 chr3 127379771 127379771 1 + C T STAD 127379769 + 127379749 127379789 41 CAGCTGGTTTGTCTGGCCAGCACGAGGAGGTGCCGGCCTTG CAGCTGGTTTGTCTGGCCAGCATGAGGAGGTGCCGGCCTTG < 41bp 0.797530558591839 0.56814781576753 0.87157977 0.89418113 prediction 0.458765485648618 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379769 chr3:127379771 synonymous SNV . 0 23 hm5C_associated_SNPs_75452 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:127379736-127379823
64251 chr7 144062359 144062359 1 + G A LAML 144062356 + 144062336 144062376 41 CAGGGGGAGGAGCAGGAGCACTCGGGGAGGACATATGAACT CAGGGGGAGGAGCAGGAGCACTCAGGGAGGACATATGAACT < 41bp 0.745850227475622 0.516470631879912 0.44932547 0.24335533 prediction 0.45875919119142 Functional Loss - ARHGEF5 ENSG00000050327 CDS Human protein_coding chr7:144062356 chr7:144062359 nonsynonymous SNV 0.102 0 24 hm5C_associated_SNPs_75454 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:144062339-144062379
64251 chr20 34502088 34502088 1 + T C LIHC 34502087 + 34502067 34502107 41 GCAGCTTCATGGCCCAGAATCTGGACACCACAAAGGGAAAG GCAGCTTCATGGCCCAGAATCCGGACACCACAAAGGGAAAG < 41bp 0.801722792764914 0.572349782590374 0.5229919 0.84149534 prediction 0.458746020349081 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34502087 chr20:34502088 synonymous SNV . 0 22 hm5C_associated_SNPs_75460 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr20:34502070-34502096
64251 chr6 36178238 36178238 1 + C T COAD 36178236 + 36178216 36178256 41 CAGAGAACATCGGCTATGACCCCGAGAGGGGCACTCACCTG CAGAGAACATCGGCTATGACCCTGAGAGGGGCACTCACCTG < 41bp 0.841716631847415 0.612345884875451 0.47093752 0.37410015 prediction 0.458741493943927 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36178236 chr6:36178238 synonymous SNV . 0 23 hm5C_associated_SNPs_75461 0 0 2 FXR2 POSTAR2 ENCODE chr6:36178211-36178269
64251 chr11 1977613 1977613 1 + C T SKCM 1977611 + 1977591 1977631 41 CAGCAGAGGCAGAGCAGCGACCCGCGGCGGGGCGGCGTCCC CAGCAGAGGCAGAGCAGCGACCTGCGGCGGGGCGGCGTCCC < 41bp 0.729368341052384 0.49019803978446 0.5002932 0.30345845 prediction 0.458736682104769 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1977611 chr11:1977613 nonsynonymous SNV 0.036 0 23 hm5C_associated_SNPs_75462 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:1977600-1977620
64251 chr20 47591350 47591350 1 + C T HNSC 47591348 + 47591328 47591368 41 TGGAGTGCCTCGTGTCCATTCTCAAGTGCATGGTGGAGTGG TGGAGTGCCTCGTGTCCATTCTTAAGTGCATGGTGGAGTGG < 41bp 0.729362249135819 0.431316284707134 0.24250886 0.068243384 prediction 0.458724498271637 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47591348 chr20:47591350 synonymous SNV . 0 23 hm5C_associated_SNPs_75467 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:47591332-47591370
64251 chr8 145730386 145730386 1 + T C COAD 145730385 + 145730365 145730405 41 TCCTGCCCGAGTCCAGGGGCCTACAGCGTCAGCTCCGGCAT TCCTGCCCGAGTCCAGGGGCCCACAGCGTCAGCTCCGGCAT < 41bp 0.729360458588592 0.478017056424637 0.58452076 0.14303723 prediction 0.458720917177185 Functional Loss - GPT ENSG00000167701 CDS Human protein_coding chr8:145730385 chr8:145730386 nonsynonymous SNV 0.132 4 22 hm5C_associated_SNPs_75468 0 0 2 PPIG POSTAR2 ENCODE chr8:145730383-145730405
64251 chr11 31531535 31531535 1 + A C LUAD 31531534 + 31531514 31531554 41 GCTGGTATCAACCGGGCTCCCAGCCCTAGACCAGCTCTTAG GCTGGTATCAACCGGGCTCCCCGCCCTAGACCAGCTCTTAG < 41bp 0.768692334166742 0.539333150259551 0.20978975 0.06654158 prediction 0.458718367814382 Functional Loss - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31531534 chr11:31531535 synonymous SNV . 0 22 hm5C_associated_SNPs_75469 0 0 1 PPIG POSTAR2 ENCODE chr11:31531487-31531549
64251 chr2 74435816 74435816 1 + C T SKCM 74435813 + 74435793 74435833 41 GTATTCCATGTTACCGGCTACTCCATGGGGTGTGTGGGAAA GTATTCCATGTTACCGGCTACTCTATGGGGTGTGTGGGAAA < 41bp 0.7293587826301 0.489674488822926 0.96412313 0.9347738 prediction 0.4587175652602 Functional Loss - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74435813 chr2:74435816 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_75470 0 0 34 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:74435691-74435834
64251 chr4 1389271 1389271 1 + G A LGG 1389268 + 1389248 1389288 41 ATGGAGTGCCCGCCTGCTCACACGTGCCATTGTGGAGTGCC ATGGAGTGCCCGCCTGCTCACACATGCCATTGTGGAGTGCC < 41bp 0.763156195162994 0.533804480409545 0.0728167 0.051440597 prediction 0.458703429506897 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389268 chr4:1389271 synonymous SNV . 0 24 hm5C_associated_SNPs_75471 0 0 2 EIF3H POSTAR2 ENCODE chr4:1389235-1389306
64251 chr12 113730845 113730845 1 + G T HNSC 113730843 + 113730823 113730863 41 CCTCCTCGGATGTCACCAGGCTGCTGGAGACCCTCTCCCAG CCTCCTCGGATGTCACCAGGCTTCTGGAGACCCTCTCCCAG < 41bp 0.729351205580718 0.376152351733963 0.77913934 0.66940576 prediction 0.458702411161437 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113730843 chr12:113730845 synonymous SNV . 0 23 hm5C_associated_SNPs_75473 0 0 4 BUD13 POSTAR2 ENCODE chr12:113730797-113730856
64251 chr12 13061403 13061403 1 + G A UCEC 13061400 + 13061380 13061420 41 CTACTCAGTTTCTCTTCCTCCTGGGTGTGTTGGGCATCTTT CTACTCAGTTTCTCTTCCTCCTGAGTGTGTTGGGCATCTTT < 41bp 0.729341432657301 0.482619814947132 0.53211105 0.1622937 prediction 0.458682865314603 Functional Loss - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061400 chr12:13061403 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_75475 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:13061385-13061423
64251 chr12 54383620 54383620 1 + C T rs186245023 54383618 + 54383598 54383638 41 AACCAGAGAGGGTCTGTAATCTCGCAGAGCACAGGCAGAAT AACCAGAGAGGGTCTGTAATCTTGCAGAGCACAGGCAGAAT < 41bp 0.729340929811191 0.479503398688666 0.31146777 0.24021566 prediction 0.458681859622383 Functional Loss - HOXC10 ENSG00000180818 UTR3 Human protein_coding chr12:54383618 chr12:54383620 . . 0 23 hm5C_associated_SNPs_75476 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:54383588-54383620
64251 chr8 38827163 38827163 1 + G A COAD 38827160 + 38827140 38827180 41 ACTTCAGAGGACTCCTTGTTCACGCCTCGTCCTGGGGAGGG ACTTCAGAGGACTCCTTGTTCACACCTCGTCCTGGGGAGGG < 41bp 0.780677396118948 0.55133703504263 0.2572114 0.29197216 prediction 0.458680722152636 Functional Loss - PLEKHA2 ENSG00000169499 CDS Human protein_coding chr8:38827160 chr8:38827163 synonymous SNV . 0 24 hm5C_associated_SNPs_75477 0 0 1 RBM15 POSTAR2 ENCODE chr8:38827154-38827185
64251 chrX 2772118 2772118 1 + G A COAD 2772115 + 2772095 2772135 41 CCTTTCTGAAGAGACCTGAGCTCGGGCTCACCCTCACCAAG CCTTTCTGAAGAGACCTGAGCTCAGGCTCACCCTCACCAAG < 41bp 0.793702962372896 0.564364190339104 0.14885661 0.082532436 prediction 0.458677544067585 Functional Loss - GYG2 ENSG00000056998 CDS Human protein_coding chrX:2772115 chrX:2772118 nonsynonymous SNV 0.661 3 24 hm5C_associated_SNPs_75479 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:2772102-2772129
64251 chr16 2812592 2812592 1 + G T UCEC 2812590 + 2812570 2812610 41 TCACGCTCCAGAACACCAGCCAGGAGAGGGAGGTCTCGGTC TCACGCTCCAGAACACCAGCCATGAGAGGGAGGTCTCGGTC < 41bp 0.729336054840538 0.376160637855842 0.869382 0.46464276 prediction 0.458672109681076 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812590 chr16:2812592 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_75482 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:2812533-2812685
64251 chr3 9739418 9739418 1 + G A UCEC 9739415 + 9739395 9739435 41 ATCAGTGGACCATCCCCTGCCCGGATCCTCTCTCTCCACAG ATCAGTGGACCATCCCCTGCCCGAATCCTCTCTCTCCACAG < 41bp 0.759832151564386 0.530499159347213 0.21282509 0.02849847 prediction 0.458665984434347 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9739415 chr3:9739418 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_75483 0 0 1 DDX24 POSTAR2 ENCODE chr3:9739418-9739457
64251 chr9 133333811 133333811 1 + G A SKCM 133333808 + 133333788 133333828 41 GTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTT GTGTTCATTGAGGATGTCAGCAGAGAGTTTGTGGAGGAGTT < 41bp 0.775072857825111 0.545756916909994 0.9097794 0.794413 prediction 0.458631881830235 Functional Loss - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133333808 chr9:133333811 synonymous SNV . 0 24 hm5C_associated_SNPs_75500 0 0 1 UPF1 POSTAR2 ENCODE chr9:133333808-133333923
64251 chr3 24003903 24003903 1 + T C OV 24003902 + 24003882 24003922 41 GTAGTGAGAGCCAGCAGCATCTCAATGGACAGTTCAAAGGG GTAGTGAGAGCCAGCAGCATCCCAATGGACAGTTCAAAGGG < 41bp 0.813514166865361 0.584198794847257 0.90891254 0.18711528 prediction 0.458630744036208 Functional Loss - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:24003902 chr3:24003903 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_75501 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr3:24003826-24003962
64251 chr15 90897952 90897952 1 + C T rs8023776 90897950 + 90897930 90897970 41 GACACTGCTTAGAGAATCCTCTCCAGGAATGCCACCCAGCA GACACTGCTTAGAGAATCCTCTTCAGGAATGCCACCCAGCA < 41bp 0.857135720698817 0.627823686135781 0.9496808 0.10217732 prediction 0.458624069126073 Functional Loss - ZNF774 ENSG00000196391 CDS Human protein_coding chr15:90897950 chr15:90897952 synonymous SNV . 0 23 hm5C_associated_SNPs_75504 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90897939-90897969
64251 chr4 1389399 1389399 1 + G A rs142215664 1389396 + 1389376 1389416 41 GGAGTGCCCGCCTGCTCACACACGTGCCCATGTGGAGTGCC GGAGTGCCCGCCTGCTCACACACATGCCCATGTGGAGTGCC < 41bp 0.769527922222857 0.540216229001713 0.106681645 0.035693318 prediction 0.458623386442288 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389396 chr4:1389399 nonsynonymous SNV 0.030 1 24 hm5C_associated_SNPs_75505 0 0 1 RPS5 POSTAR2 ENCODE chr4:1389391-1389448
64251 chr1 28879629 28879629 1 + G T SARC 28879627 + 28879607 28879647 41 ACCCCGGTGCGCGGGTATGGCGGCCAGCCTGTGGATGGGCG ACCCCGGTGCGCGGGTATGGCGTCCAGCCTGTGGATGGGCG < 41bp 0.729310469407692 0.385716462886768 0.31432444 0.1613748 prediction 0.458620938815384 Functional Loss - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28879627 chr1:28879629 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_75506 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:28879613-28879640
64251 chr14 59961874 59961874 1 + G T LIHC 59961871 + 59961851 59961891 41 TTGATGCTTTCTGACTGGTACACGATGCTTTACAACCCAAG TTGATGCTTTCTGACTGGTACACTATGCTTTACAACCCAAG < 41bp 0.729304820423294 0.354474072493101 0.06581816 0.055596083 prediction 0.458609640846588 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59961871 chr14:59961874 synonymous SNV . 0 24 hm5C_associated_SNPs_75508 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr14:59961860-59961880
64251 chr14 59961873 59961873 1 + C T UCEC 59961871 + 59961851 59961891 41 TTGATGCTTTCTGACTGGTACACGATGCTTTACAACCCAAG TTGATGCTTTCTGACTGGTACATGATGCTTTACAACCCAAG < 41bp 0.729304820423294 0.44566907050446 0.06581816 0.11466834 prediction 0.458609640846588 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59961871 chr14:59961873 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75509 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr14:59961860-59961880
64251 chr11 640099 640099 1 + A C rs34662058 640098 + 640078 640118 41 GACTGTGCGCCCGCCGCGCCCAGCCTCCCCCAGGACCCCTG GACTGTGCGCCCGCCGCGCCCCGCCTCCCCCAGGACCCCTG < 41bp 0.76029340259107 0.530990627935974 0.12915018 0.024217218 prediction 0.458605549310191 Functional Loss - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640098 chr11:640099 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_75510 0 0 1 XRN2 POSTAR2 ENCODE chr11:640066-640103
64251 chrX 70824046 70824046 1 + G C HNSC 70824042 + 70824022 70824062 41 AGTGATGATTCGGAAGCTCCCGACGACAAGAGTGATGATTC AGTGATGATTCGGAAGCTCCCGACCACAAGAGTGATGATTC < 41bp 0.729296035131526 0.426511768643345 0.6729344 0.3298524 prediction 0.458592070263051 Functional Loss - GCNA ENSG00000147174 CDS Human protein_coding chrX:70824042 chrX:70824046 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_75512 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70824036-70824060
64251 chrX 48457983 48457983 1 + G A COAD 48457980 + 48457960 48458000 41 CCTATTGGGGCCCAGGCCCCCTGGCAGCGTGGTGCCCACGT CCTATTGGGGCCCAGGCCCCCTGACAGCGTGGTGCCCACGT < 41bp 0.729291649892332 0.492965557440745 0.07931456 0.03130302 prediction 0.458583299784664 Functional Loss - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48457980 chrX:48457983 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75517 0 0 7 BUD13 POSTAR2 ENCODE chrX:48457905-48458006
64251 chr16 11274397 11274397 1 + A T rs145082036 11274393 + 11274373 11274413 41 AGGACCACAGCATCAGGAGACGGGACACGCCACACCCAGCA AGGACCACAGCATCAGGAGACGGGTCACGCCACACCCAGCA < 41bp 0.836822451452371 0.607533131132565 0.6155232 0.32467717 prediction 0.458578640639614 Functional Loss - CLEC16A ENSG00000038532 UTR3 Human protein_coding chr16:11274393 chr16:11274397 . . 0 25 hm5C_associated_SNPs_75519 0 0 1 RBM22 POSTAR2 ENCODE chr16:11274351-11274407
64251 chr10 103899717 103899717 1 + C T UCEC 103899715 + 103899695 103899735 41 GGAGGCTGAGGTCATCTTCTCGCGGGCAGTCTACTGTAGGT GGAGGCTGAGGTCATCTTCTCGTGGGCAGTCTACTGTAGGT < 41bp 0.79746865596672 0.568180581335005 0.89488506 0.8953799 prediction 0.458576149263429 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103899715 chr10:103899717 synonymous SNV . 0 23 hm5C_associated_SNPs_75520 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:103899677-103899719
64251 chr7 66237049 66237049 1 + T C SKCM 66237048 + 66237028 66237068 41 CAGAAGCAGATTCAGGAGGACTGGGAGCTGGCGGAGCGGTA CAGAAGCAGATTCAGGAGGACCGGGAGCTGGCGGAGCGGTA < 41bp 0.749805608482334 0.520519844303988 0.90331084 0.91147536 prediction 0.458571528356691 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66237048 chr7:66237049 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_75521 0 0 2 UCHL5 POSTAR2 ENCODE chr7:66237042-66237066
64251 chr15 66599257 66599257 1 + A C rs367709961 66599253 + 66599233 66599273 41 AGCAATGCTGCTATCTGCCACGGGAAAGAGGAGAGTCCATG AGCAATGCTGCTATCTGCCACGGGCAAGAGGAGAGTCCATG < 41bp 0.729285689902203 0.316843973528345 0.8143002 0.4529916 prediction 0.458571379804406 Functional Loss - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66599253 chr15:66599257 nonsynonymous SNV 0.086 3 25 hm5C_associated_SNPs_75522 0 0 1 BUD13 POSTAR2 ENCODE chr15:66599142-66599291
64251 chr11 93528152 93528152 1 + G A LUSC 93528149 + 93528129 93528169 41 AGAAATTTTTGCACAGCTCTCTCGGGAAGCTGTTCAAATTA AGAAATTTTTGCACAGCTCTCTCAGGAAGCTGTTCAAATTA < 41bp 0.749472315156098 0.520194418303774 0.064608365 0.019208401 prediction 0.458555793704648 Functional Loss - MED17 ENSG00000042429 CDS Human protein_coding chr11:93528149 chr11:93528152 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_75524 0 0 1 GPKOW POSTAR2 ENCODE chr11:93528062-93528185
64251 chr9 35750883 35750883 1 + G T LUSC 35750881 + 35750861 35750901 41 TAGAGGGACCACCCTCCTTTCGGGGTCAGTCAGTCAAGTAC TAGAGGGACCACCCTCCTTTCGTGGTCAGTCAGTCAAGTAC < 41bp 0.89923267660164 0.669960394282357 0.9479226 0.8772458 prediction 0.458544564638565 Functional Loss - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35750881 chr9:35750883 synonymous SNV . 0 23 hm5C_associated_SNPs_75528 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr9:35750865-35750893
64251 chr13 53227190 53227190 1 + G T GBM 53227187 + 53227167 53227207 41 TGTTTTCCTGACAGGTTTTTCCAGAGCTTCTCGGATGCCCT TGTTTTCCTGACAGGTTTTTCCATAGCTTCTCGGATGCCCT < 41bp 0.729271596216761 0.377470216121046 0.88796616 0.37937516 prediction 0.458543192433521 Functional Loss - SUGT1 ENSG00000165416 CDS Human protein_coding chr13:53227187 chr13:53227190 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_75529 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:53227180-53227200
64251 chr19 1913106 1913106 1 + G A STAD 1913103 + 1913083 1913123 41 ACCACCGCTTCCAGGTGTTCCGCGGGGTGCTGGAGGAGCAG ACCACCGCTTCCAGGTGTTCCGCAGGGTGCTGGAGGAGCAG < 41bp 0.729271343798403 0.490281973295555 0.89971304 0.2526555 prediction 0.458542687596806 Functional Loss - ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913103 chr19:1913106 nonsynonymous SNV 0.596 3 24 hm5C_associated_SNPs_75530 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:1913094-1913129
64251 chr4 7780516 7780516 1 + C T STAD 7780514 + 7780494 7780534 41 CCCGTCCTTTTCACAACAGCCGCGGGATCCGCTTTCTTTGG CCCGTCCTTTTCACAACAGCCGTGGGATCCGCTTTCTTTGG < 41bp 0.762486919873727 0.533223181393253 0.43034148 0.6739883 prediction 0.458527476960948 Functional Loss - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7780514 chr4:7780516 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_75535 0 0 1 METAP2 POSTAR2 ENCODE chr4:7780498-7780579
64251 chr5 224567 224567 1 + T C CESC 224566 + 224546 224586 41 GCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAG GCGAGCTGCATTTGGCCTTTCCGAGGCAGGGTTTAATACAG < 41bp 0.770582487547174 0.541325433380891 0.55909973 0.8866486 prediction 0.458514108332564 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:224566 chr5:224567 synonymous SNV . 0 22 hm5C_associated_SNPs_75539 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:224550-224586
64251 chr17 65739701 65739701 1 + A C COAD 65739700 + 65739680 65739720 41 TTTACAAGCTTGTAAAATCTCAGGTTTGTGATTATTTGATA TTTACAAGCTTGTAAAATCTCCGGTTTGTGATTATTTGATA < 41bp 0.729243836668731 0.479697943290425 0.3410207 0.05654919 prediction 0.458487673337463 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65739700 chr17:65739701 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_75548 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:65739680-65739713
64251 chr12 51318911 51318911 1 + G A SKCM 51318908 + 51318888 51318928 41 AACTTTCTGGGCTTGTGGAGCTGGATATGCAAAAAATGGTT AACTTTCTGGGCTTGTGGAGCTGAATATGCAAAAAATGGTT < 41bp 0.729243190587626 0.490816838734044 0.4494331 0.33478624 prediction 0.458486381175252 Functional Loss - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51318908 chr12:51318911 stopgain 0.679 0 24 hm5C_associated_SNPs_75549 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:51318887-51318911
64251 chr12 6626089 6626089 1 + C T SKCM 6626086 + 6626066 6626106 41 CTGGAAGCAGCAGCCCGAGACACCAGAGACCAGTTCTTGGA CTGGAAGCAGCAGCCCGAGACACTAGAGACCAGTTCTTGGA < 41bp 0.734115278062314 0.504874417455065 0.1540446 0.086693734 prediction 0.458481721214498 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6626086 chr12:6626089 synonymous SNV . 0 24 hm5C_associated_SNPs_75552 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:6626060-6626127
64251 chr22 17978494 17978494 1 + G T LUSC 17978491 + 17978471 17978511 41 GCCATTGGGTGAAGACAATTCTGGGGCACTATATTGGTATT GCCATTGGGTGAAGACAATTCTGTGGCACTATATTGGTATT < 41bp 0.729239585411669 0.449961765062563 0.88334537 0.320051 prediction 0.458479170823338 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:17978491 chr22:17978494 nonsynonymous SNV 0.676 2 24 hm5C_associated_SNPs_75554 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:17978484-17978506
64251 chr22 17978493 17978493 1 + G T UCEC 17978491 + 17978471 17978511 41 GCCATTGGGTGAAGACAATTCTGGGGCACTATATTGGTATT GCCATTGGGTGAAGACAATTCTTGGGCACTATATTGGTATT < 41bp 0.729239585411669 0.4696758664114 0.88334537 0.29654485 prediction 0.458479170823338 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:17978491 chr22:17978493 nonsynonymous SNV 0.685 3 23 hm5C_associated_SNPs_75555 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:17978484-17978506
64251 chr19 49132743 49132743 1 + C T UCEC 49132741 + 49132721 49132761 41 CCTGGTGGCAGCTCCGCATGCGCGCTTCGACGACGGCCTGG CCTGGTGGCAGCTCCGCATGCGTGCTTCGACGACGGCCTGG < 41bp 0.771218740583343 0.541980026810258 0.33944955 0.36908114 prediction 0.458477427546171 Functional Loss - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132741 chr19:49132743 nonsynonymous SNV 0.427 2 23 hm5C_associated_SNPs_75556 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49132716-49132781
64251 chr20 61467614 61467614 1 + G A STAD 61467611 + 61467591 61467631 41 CCAGCGGTGTTCAGGGTGTCCCCGGGCCCCCCGGTCCTCTG CCAGCGGTGTTCAGGGTGTCCCCAGGCCCCCCGGTCCTCTG < 41bp 0.765147115341898 0.535910018437523 0.89820087 0.8362224 prediction 0.45847419380875 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467611 chr20:61467614 nonsynonymous SNV 0.003 5 24 hm5C_associated_SNPs_75557 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:61467606-61467638
64251 chr1 163298075 163298075 1 + A C OV 163298074 + 163298054 163298094 41 ATGGAAGGCTTCTTACCATTCAGCAATTTAGTTACTCATCT ATGGAAGGCTTCTTACCATTCCGCAATTTAGTTACTCATCT < 41bp 0.779110457196987 0.549874943204651 0.09777784 0.07981512 prediction 0.458471027984673 Functional Loss - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163298074 chr1:163298075 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_75558 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:163298053-163298085
64251 chr4 1803385 1803385 1 + G A rs147769045 1803382 + 1803362 1803402 41 TGGAGCCTGGTCATGGAAAGCGTGGTGCCCTCGGACCGCGG TGGAGCCTGGTCATGGAAAGCGTAGTGCCCTCGGACCGCGG < 41bp 0.774917181250557 0.545684302840606 0.7521839 0.3259666 prediction 0.458465756819902 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1803382 chr4:1803385 synonymous SNV . 0 24 hm5C_associated_SNPs_75560 0 0 7 GRWD1 POSTAR2 ENCODE chr4:1803374-1803408
64251 chr19 36276186 36276186 1 + A T LIHC 36276182 + 36276162 36276202 41 GCCGGGGCCCCAGTGTCCCTCGAAAGAAGCCCCTGCCCTGG GCCGGGGCCCCAGTGTCCCTCGAATGAAGCCCCTGCCCTGG < 41bp 0.875848986330496 0.646618001532833 0.9091391 0.88393426 prediction 0.458461969595325 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36276182 chr19:36276186 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_75562 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:36276156-36276202
64251 chr17 20107730 20107730 1 + G T UCEC 20107727 + 20107707 20107747 41 CTCAAGAGAGAGGTCTGTGCCACGTGGTCCCTCCAACCCCA CTCAAGAGAGAGGTCTGTGCCACTTGGTCCCTCCAACCCCA < 41bp 0.729223785447497 0.345691559567244 0.025234967 0.0031591356 prediction 0.458447570894995 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20107727 chr17:20107730 nonsynonymous SNV 0.944 4 24 hm5C_associated_SNPs_75566 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:20107716-20107756
64251 chr17 18638563 18638563 1 + C T GBM 18638561 + 18638541 18638581 41 AAGCTGGCCCTTTCTGGAGGCTCGGGGTCTATATTGACTTC AAGCTGGCCCTTTCTGGAGGCTTGGGGTCTATATTGACTTC < 41bp 0.729216537977433 0.449847941428254 0.5161221 0.58298975 prediction 0.458433075954865 Functional Loss - TRIM16L ENSG00000108448 CDS Human protein_coding chr17:18638561 chr17:18638563 synonymous SNV . 0 23 hm5C_associated_SNPs_75568 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:18638516-18638572
64251 chr2 220379714 220379714 1 + C T LGG 220379712 + 220379692 220379732 41 GTACCAGGCGGCTGGCCTGGCCCGGGGCTACCTGACCCGGC GTACCAGGCGGCTGGCCTGGCCTGGGGCTACCTGACCCGGC < 41bp 0.76786186268114 0.538646663077361 0.6507375 0.82476264 prediction 0.458430399207559 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379712 chr2:220379714 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_75570 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379653-220379732
64251 chr17 1940223 1940223 1 + G A CESC 1940220 + 1940200 1940240 41 GATCCTGGGCTGCACATCCCCCCGACTGTCCAAAGAGGTGG GATCCTGGGCTGCACATCCCCCCAACTGTCCAAAGAGGTGG < 41bp 0.740096228320231 0.510892237857099 0.0141046345 0.015465587 prediction 0.458407980926264 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1940220 chr17:1940223 nonsynonymous SNV 0.760 0 24 hm5C_associated_SNPs_75577 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr17:1940200-1940223
64251 chr16 57787314 57787314 1 + T C COAD 57787313 + 57787293 57787333 41 GCTCCCAGGGTGAAGCAGAACTCAGAGAGCGAGCGCCGCAG GCTCCCAGGGTGAAGCAGAACCCAGAGAGCGAGCGCCGCAG < 41bp 0.794974064103176 0.56577335213909 0.37701243 0.19476476 prediction 0.458401423928173 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57787313 chr16:57787314 nonsynonymous SNV 0.985 0 22 hm5C_associated_SNPs_75581 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:57787314-57787315
64251 chr11 65733421 65733421 1 + G A CESC 65733418 + 65733398 65733438 41 AGCATGCCATTGATTCCTTCCGAGAAGGGGAGACAATGATT AGCATGCCATTGATTCCTTCCGAAAAGGGGAGACAATGATT < 41bp 0.729199153567294 0.486758493184053 0.16781813 0.053316236 prediction 0.458398307134588 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733418 chr11:65733421 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_75583 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65733383-65733421
64251 chr4 146044398 146044398 1 + G C LUAD 146044394 + 146044374 146044414 41 CATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTT CATTATCTGGTGGTGAACTACAGCCAGTAGCTTTAGCCCTT < 41bp 0.729198014538213 0.447328663170589 0.37715572 0.0905143 prediction 0.458396029076426 Functional Loss - ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146044394 chr4:146044398 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_75585 0 0 4 PPIG POSTAR2 ENCODE chr4:146044366-146044416
64251 chr5 177034312 177034312 1 + G A PAAD 177034309 + 177034289 177034329 41 CCCACCCTGCACAGGTTCAACCGGGCAGCGCTCATCAACGT CCCACCCTGCACAGGTTCAACCGAGCAGCGCTCATCAACGT < 41bp 0.749806184034473 0.520608440964907 0.51550317 0.3217748 prediction 0.458395486139132 Functional Loss - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177034309 chr5:177034312 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_75586 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585666 chr5:177034303-177034328
64251 chr8 128750820 128750820 1 + G A DLBC 128750817 + 128750797 128750837 41 GACCAGCTGGAGATGGTGACCGAGCTGCTGGGAGGAGACAT GACCAGCTGGAGATGGTGACCGAACTGCTGGGAGGAGACAT < 41bp 0.729196693105731 0.495627624740466 0.8741973 0.6567836 prediction 0.458393386211463 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128750817 chr8:128750820 synonymous SNV . 0 24 hm5C_associated_SNPs_75587 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:128750800-128750820
64251 chr6 26156989 26156989 1 + G A SKCM 26156986 + 26156966 26157006 41 CAAGCCTAAGGCTAAAAAGGCAGGCGCGGCCAAGGCCAAGA CAAGCCTAAGGCTAAAAAGGCAGACGCGGCCAAGGCCAAGA < 41bp 0.77447840105302 0.545290795218497 0.8472457 0.48415157 prediction 0.458375211669046 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156986 chr6:26156989 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_75595 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:26156916-26157005
64251 chr2 132021439 132021439 1 + T C OV 132021438 + 132021418 132021458 41 CTCCCGAGGAGCACCCCATCCTGCTGACCGAGGCCCCCCTG CTCCCGAGGAGCACCCCATCCCGCTGACCGAGGCCCCCCTG < 41bp 0.787858702864188 0.558682045407022 0.28881758 0.3922474 prediction 0.458353314914332 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021438 chr2:132021439 nonsynonymous SNV 0.443 4 22 hm5C_associated_SNPs_75602 0 0 4 RBM15 POSTAR2 ENCODE chr2:132021390-132021456
64251 chr1 146714392 146714392 1 + G C rs1890042 146714391 + 146714371 146714411 41 TACTAGCCGCGGGGGCCAAGCGCCTGGCTTCTTACTGCGGC TACTAGCCGCGGGGGCCAAGCCCCTGGCTTCTTACTGCGGC < 41bp 0.729175362642907 0.421663695245485 0.6466973 0.4746569 prediction 0.458350725285815 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146714391 chr1:146714392 synonymous SNV . 0 22 hm5C_associated_SNPs_75603 0 0 10 DDX3X POSTAR2 ENCODE chr1:146714349-146714405
64251 chr12 100928782 100928782 1 + C T GBM 100928780 + 100928760 100928800 41 CGTGACTTGCGACAAGTGACCTCGACAACAAAGTCATGCAG CGTGACTTGCGACAAGTGACCTTGACAACAAAGTCATGCAG < 41bp 0.848415864165535 0.619246025777132 0.116615415 0.039806306 prediction 0.458339676776807 Functional Loss - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100928780 chr12:100928782 nonsynonymous SNV 0.858 5 23 hm5C_associated_SNPs_75606 0 0 1 UCHL5 POSTAR2 ENCODE chr12:100928712-100928792
64251 chr16 70500818 70500818 1 + T C UCEC 70500817 + 70500797 70500837 41 TCCCCGCCAGGCGTGTGGGTCTGCAGCACCGACATGCTGCT TCCCCGCCAGGCGTGTGGGTCCGCAGCACCGACATGCTGCT < 41bp 0.729165199266816 0.471264407427915 0.5047545 0.3312197 prediction 0.458330398533632 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70500817 chr16:70500818 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_75613 0 0 4 DDX24 POSTAR2 ENCODE chr16:70500777-70500823
64251 chr21 34635499 34635499 1 + G A UCEC 34635496 + 34635476 34635516 41 CCCGAAGAGGACTACAGCTCCACGGAGGGGTCTGGGGGCAG CCCGAAGAGGACTACAGCTCCACAGAGGGGTCTGGGGGCAG < 41bp 0.749307335385734 0.520145300949287 0.3364453 0.23424718 prediction 0.458324068872894 Functional Loss - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635496 chr21:34635499 synonymous SNV . 0 24 hm5C_associated_SNPs_75615 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34635496-34635514
64251 chr3 122842988 122842988 1 + A C BRCA 122842987 + 122842967 122843007 41 TACAGCGTGCGCGGCTTCCCCACCATCTGCTATTTTGAGTA TACAGCGTGCGCGGCTTCCCCCCCATCTGCTATTTTGAGTA < 41bp 0.810664923838373 0.581516958398587 0.23416457 0.100320816 prediction 0.45829593087957 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122842987 chr3:122842988 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_75622 0 0 4 PRPF8 POSTAR2 ENCODE chr3:122842973-122843047
64251 chr1 6279359 6279359 1 + G A LUAD 6279356 + 6279336 6279376 41 TCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCCTCTC TCAGAGCCTAAAGGAAACAGCTGAGCTCCGAACGGCCTCTC < 41bp 0.767320156336361 0.538190746116951 0.38561457 0.21835491 prediction 0.45825882043882 Functional Loss - RNF207 ENSG00000158286 CDS Human protein_coding chr1:6279356 chr1:6279359 stopgain 0.072 0 24 hm5C_associated_SNPs_75632 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:6279341-6279362
64251 chr16 27720232 27720232 1 + G A BLCA 27720229 + 27720209 27720249 41 GAGCTGGGCCGCCTCGTCAACAGGAACTTAGCTGTGAGTGG GAGCTGGGCCGCCTCGTCAACAGAAACTTAGCTGTGAGTGG < 41bp 0.779578684474485 0.550449920156428 0.8926996 0.62377757 prediction 0.458257528636114 Functional Loss - KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27720229 chr16:27720232 synonymous SNV . 0 24 hm5C_associated_SNPs_75633 0 0 3 BUD13 POSTAR2 ENCODE chr16:27720180-27720240
64251 chr19 36244981 36244981 1 + G A LUAD 36244978 + 36244958 36244998 41 AGCTGCCGCCACCCACACCCCCGGGGCCACCCGGAGATGCC AGCTGCCGCCACCCACACCCCCGAGGCCACCCGGAGATGCC < 41bp 0.729124645784305 0.479240237903032 0.1692406 0.019150168 prediction 0.458249291568611 Functional Loss - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36244978 chr19:36244981 nonsynonymous SNV 0.356 1 24 hm5C_associated_SNPs_75636 0 0 1 UCHL5 POSTAR2 ENCODE chr19:36244953-36245046
64251 chr20 58519188 58519188 1 + G A UCEC 58519185 + 58519165 58519205 41 CAAGACGCAAAAGGAATCCACTCGGTTCCAGGTGTCAGGGG CAAGACGCAAAAGGAATCCACTCAGTTCCAGGTGTCAGGGG < 41bp 0.761827415611025 0.532705766329064 0.27232546 0.11573672 prediction 0.458243298563921 Functional Loss - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519185 chr20:58519188 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_75637 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:58519179-58519200
64251 chr20 3557593 3557593 1 + G A ESCA 3557590 + 3557570 3557610 41 CCAGCTGCAGGAGCTGTGCCCTGGACCAGAACTGCCAGTGG CCAGCTGCAGGAGCTGTGCCCTGAACCAGAACTGCCAGTGG < 41bp 0.766092377048579 0.536972707930661 0.62036836 0.3902284 prediction 0.458239338235835 Functional Loss - ATRN ENSG00000088812 CDS Human protein_coding chr20:3557590 chr20:3557593 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_75639 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:3557576-3557611
64251 chr20 11903564 11903564 1 + C T SKCM 11903562 + 11903542 11903582 41 TCCAGACACTAGAAAGTATTCTCCGTAGGGAAACTCTGAAT TCCAGACACTAGAAAGTATTCTTCGTAGGGAAACTCTGAAT < 41bp 0.729116564899688 0.442497214830301 0.07990739 0.20812467 prediction 0.458233129799376 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903562 chr20:11903564 synonymous SNV . 0 23 hm5C_associated_SNPs_75640 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:11903505-11903576
64251 chr19 13189483 13189483 1 + C T BLCA 13189481 + 13189461 13189501 41 CTTCTGCAGTGCCCTCTCCTCTCAGGGCAGCTCCCCGCGCA CTTCTGCAGTGCCCTCTCCTCTTAGGGCAGCTCCCCGCGCA < 41bp 0.838215310257861 0.609098824355697 0.60575724 0.37691328 prediction 0.458232971804327 Functional Loss - NFIX ENSG00000008441 CDS Human protein_coding chr19:13189481 chr19:13189483 stopgain 1.000 0 23 hm5C_associated_SNPs_75641 0 0 1 RBFOX2 POSTAR2 ENCODE chr19:13189483-13189619
64251 chr11 119156042 119156042 1 + A T LUSC 119156038 + 119156018 119156058 41 AAGACGCCCCTTGCCTTGTACACCAGGCGACTGTCCCTCCA AAGACGCCCCTTGCCTTGTACACCTGGCGACTGTCCCTCCA < 41bp 0.729116470152304 0.376562537405719 0.033014983 0.026934773 prediction 0.458232940304607 Functional Loss - CBL ENSG00000110395 CDS Human protein_coding chr11:119156038 chr11:119156042 synonymous SNV . 0 25 hm5C_associated_SNPs_75642 0 0 2 IGF2BP2 POSTAR2 ENCODE chr11:119156021-119156130
64251 chr10 93719804 93719804 1 + G T UCEC 93719802 + 93719782 93719822 41 TTTAAAACACATGAACGAAACAGGAGTTCATAAGACTGTGG TTTAAAACACATGAACGAAACATGAGTTCATAAGACTGTGG < 41bp 0.729113821322714 0.403261255542994 0.32508948 0.08899602 prediction 0.458227642645427 Functional Loss - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93719802 chr10:93719804 stopgain 1.000 1 23 hm5C_associated_SNPs_75646 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:93719764-93719854
64251 chr14 23072983 23072983 1 + G A LUSC 23072980 + 23072960 23073000 41 GTTCTTCGAGTAGCTGGGCCCTGGGGTGAGTAGCCTGTAGT GTTCTTCGAGTAGCTGGGCCCTGAGGTGAGTAGCCTGTAGT < 41bp 0.762216181891997 0.533108711739641 0.8863398 0.31510708 prediction 0.458214940304712 Functional Loss - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23072980 chr14:23072983 stopgain 1.000 1 24 hm5C_associated_SNPs_75649 0 0 2 PPIG POSTAR2 ENCODE chr14:23072957-23073000
64251 chr14 70442476 70442476 1 + G T LUAD 70442474 + 70442454 70442494 41 GGTACTGCTGGTGTGTCACCCCGGATGGGAAGCCCATCAGT GGTACTGCTGGTGTGTCACCCCTGATGGGAAGCCCATCAGT < 41bp 0.729106382470353 0.375930326720832 0.70831406 0.25501674 prediction 0.458212764940707 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70442474 chr14:70442476 synonymous SNV . 0 23 hm5C_associated_SNPs_75650 0 0 3 RPS3 POSTAR2 ENCODE chr14:70442471-70442515
64251 chr14 70442477 70442477 1 + G A UCEC 70442474 + 70442454 70442494 41 GGTACTGCTGGTGTGTCACCCCGGATGGGAAGCCCATCAGT GGTACTGCTGGTGTGTCACCCCGAATGGGAAGCCCATCAGT < 41bp 0.729106382470353 0.478982362110383 0.70831406 0.24940583 prediction 0.458212764940707 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70442474 chr14:70442477 nonsynonymous SNV 0.977 2 24 hm5C_associated_SNPs_75651 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr14:70442477-70442504
64251 chr2 26407968 26407968 1 + G A rs564228432 26407965 + 26407945 26407985 41 GTGAGCCCCGACTGGGCAGCCGCGCCCGAGCCCGCCGCGCC GTGAGCCCCGACTGGGCAGCCGCACCCGAGCCCGCCGCGCC < 41bp 0.782405200931579 0.553300473602687 0.3641646 0.23600724 prediction 0.458209454657783 Functional Loss - GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26407965 chr2:26407968 synonymous SNV . 0 24 hm5C_associated_SNPs_75652 0 0 1 DDX3X POSTAR2 ENCODE chr2:26407878-26408006
64251 chr4 142150788 142150788 1 + G T HNSC 142150785 + 142150765 142150805 41 GTAGGAAATGTCTCAGTACACATGCTTGTGCCTGCCCTCTT GTAGGAAATGTCTCAGTACACATTCTTGTGCCTGCCCTCTT < 41bp 0.729104538469436 0.335489335252728 0.15161377 0.035102785 prediction 0.458209076938872 Functional Loss - ZNF330 ENSG00000109445 CDS Human protein_coding chr4:142150785 chr4:142150788 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_75653 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr4:142150702-142150852
64251 chr16 310063 310063 1 + G C CESC 310059 + 310039 310079 41 GTGGCCCAAGACGTGGCCCTCGTGGAGTGTGCTGTGCCCCA GTGGCCCAAGACGTGGCCCTCGTGCAGTGTGCTGTGCCCCA < 41bp 0.729100958241563 0.42563178470942 0.9040233 0.52027386 prediction 0.458201916483127 Functional Loss - FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:310059 chr16:310063 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_75654 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:310060-310077
64251 chr15 69706663 69706663 1 + G C rs192748396 69706659 + 69706639 69706679 41 ATGCGCCAGGCGGGAGCTCACCTGGGCTCTTAGCGTCGCCG ATGCGCCAGGCGGGAGCTCACCTGCGCTCTTAGCGTCGCCG < 41bp 0.729100600455594 0.45439859727518 0.87240064 0.20375812 prediction 0.458201200911187 Functional Loss - LOC145694 ENSG00000259426 ncRNA_exonic Human antisense chr15:69706659 chr15:69706663 . . 0 25 hm5C_associated_SNPs_75655 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:69706660-69706680
64251 chr19 14162734 14162734 1 + G A UCEC 14162731 + 14162711 14162751 41 AAAGTGCTGCCCCGCTGGGTCTGGGAGAAAGTTCCTGATCC AAAGTGCTGCCCCGCTGGGTCTGAGAGAAAGTTCCTGATCC < 41bp 0.791644423511951 0.562544924541285 0.5857561 0.16927016 prediction 0.458198997941331 Functional Loss - IL27RA ENSG00000104998 CDS Human protein_coding chr19:14162731 chr19:14162734 stopgain 0.990 0 24 hm5C_associated_SNPs_75656 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14162714-14162763
64251 chr14 67768707 67768707 1 + G A BLCA 67768704 + 67768684 67768724 41 AACAGGCACTTTTACTGGCCCACGATAAGGTTGCTGAGCAG AACAGGCACTTTTACTGGCCCACAATAAGGTTGCTGAGCAG < 41bp 0.729097835547261 0.496911266813004 0.15931648 0.05295372 prediction 0.458195671094523 Functional Loss - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67768704 chr14:67768707 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_75657 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:67768696-67768726
64251 chr10 104156761 104156761 1 + C T LUSC 104156759 + 104156739 104156779 41 AGTCTGGTGGGCAAGCAATGCTCGGAGCTGGGGATCTGCGC AGTCTGGTGGGCAAGCAATGCTTGGAGCTGGGGATCTGCGC < 41bp 0.834835752455341 0.605744206379356 0.54928786 0.42677552 prediction 0.458183092151971 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104156759 chr10:104156761 nonsynonymous SNV 0.191 2 23 hm5C_associated_SNPs_75661 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104156754-104156798
64251 chr7 97822796 97822796 1 + G A UCEC 97822793 + 97822773 97822813 41 CTCTGGAGTCAGTGGATGTCCACGAAGCGCTACTGGACTCT CTCTGGAGTCAGTGGATGTCCACAAAGCGCTACTGGACTCT < 41bp 0.738628430123772 0.509538573965194 0.17023808 0.13081259 prediction 0.458179712317155 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822793 chr7:97822796 nonsynonymous SNV 0.849 2 24 hm5C_associated_SNPs_75663 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:97822781-97822799
64251 chr12 14576892 14576892 1 + C T UCEC 14576890 + 14576870 14576910 41 TCAGAAAAAAGTCTTTAAGGCTCGAAAAACGATGAGAGTGA TCAGAAAAAAGTCTTTAAGGCTTGAAAAACGATGAGAGTGA < 41bp 0.729085321953778 0.444938984247272 0.25775257 0.076954186 prediction 0.458170643907556 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14576890 chr12:14576892 stopgain 1.000 1 23 hm5C_associated_SNPs_75668 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr12:14576880-14576900
64251 chr8 42019805 42019805 1 + C T UCEC 42019803 + 42019783 42019823 41 ATATTAATTGCCTCAGGAAGCACGAATGTGGGTGACCAGCT ATATTAATTGCCTCAGGAAGCATGAATGTGGGTGACCAGCT < 41bp 0.843975061344966 0.614892538544503 0.13807973 0.12181577 prediction 0.458165045600926 Functional Loss - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42019803 chr8:42019805 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_75672 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:42019804-42019805
64251 chr17 8171970 8171970 1 + G A rs150994580 8171967 + 8171947 8171987 41 GCTGTCAACTGCTGGCTCTGCTCGGCTGGGTGGGAGGCGAC GCTGTCAACTGCTGGCTCTGCTCAGCTGGGTGGGAGGCGAC < 41bp 0.775946422071321 0.546869826544992 0.14530772 0.0680857 prediction 0.458153191052658 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8171967 chr17:8171970 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_75675 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:8171943-8171981
64251 chr11 73964689 73964689 1 + G A rs3741133 73964686 + 73964666 73964706 41 GGCTCCCGGTAGACGGGCACCCCGAGATGTACCAACCTTTT GGCTCCCGGTAGACGGGCACCCCAAGATGTACCAACCTTTT < 41bp 0.731189801131662 0.502119165328746 0.23432377 0.1687977 prediction 0.458141271605832 Functional Loss - PPME1 ENSG00000214517 UTR3 Human protein_coding chr11:73964686 chr11:73964689 . . 0 24 hm5C_associated_SNPs_75677 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:73964660-73964689
64251 chr6 105526436 105526436 1 + G T LUAD 105526434 + 105526414 105526454 41 CACAGCCACCCGCGAGTTCTCAGGGAAGACAGGAAGCAGAA CACAGCCACCCGCGAGTTCTCATGGAAGACAGGAAGCAGAA < 41bp 0.899765772628608 0.670698763798136 0.9499831 0.8757026 prediction 0.458134017660945 Functional Loss - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105526434 chr6:105526436 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_75680 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:105526357-105526436
64251 chr16 30960706 30960706 1 + C T BLCA 30960704 + 30960684 30960724 41 CCACGTACCGGGAGTTCGTGCACCGCGGCTACCTGGACCTC CCACGTACCGGGAGTTCGTGCATCGCGGCTACCTGGACCTC < 41bp 0.729062868552168 0.490090018977649 0.7355533 0.6771085 prediction 0.458125737104337 Functional Loss - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960704 chr16:30960706 synonymous SNV . 0 23 hm5C_associated_SNPs_75684 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:30960703-30960727
64251 chr19 10398280 10398280 1 + G A BRCA 10398277 + 10398257 10398297 41 GGAAATACACTTTGCGCTGCCACGTGACGCAGGTGTTCCCG GGAAATACACTTTGCGCTGCCACATGACGCAGGTGTTCCCG < 41bp 0.770773316703483 0.541712052314164 0.6557569 0.90282714 prediction 0.458122528778639 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398277 chr19:10398280 nonsynonymous SNV 0.955 2 24 hm5C_associated_SNPs_75685 0 0 1 SND1 POSTAR2 ENCODE chr19:10398239-10398312
64251 chr14 20943381 20943381 1 + G A LUSC 20943378 + 20943358 20943398 41 TTGAGACTGTGGCAGAATGTCGTGTGCTGCAGAAGCTGGGA TTGAGACTGTGGCAGAATGTCGTATGCTGCAGAAGCTGGGA < 41bp 0.72905678755173 0.48479919246816 0.8279994 0.5795726 prediction 0.45811357510346 Functional Loss - PNP ENSG00000198805 CDS Human protein_coding chr14:20943378 chr14:20943381 nonsynonymous SNV 0.434 1 24 hm5C_associated_SNPs_75692 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:20943373-20943399
64251 chr2 18112940 18112940 1 + T C LUAD 18112939 + 18112919 18112959 41 GAGAAGTGGATGATCCGGTGCTGGAAGGAGTGGAGATCGCG GAGAAGTGGATGATCCGGTGCCGGAAGGAGTGGAGATCGCG < 41bp 0.774081032558176 0.545025614680336 0.12847114 0.63967496 prediction 0.45811083575568 Functional Loss - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18112939 chr2:18112940 nonsynonymous SNV 0.992 5 22 hm5C_associated_SNPs_75693 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:18112936-18112961
64251 chr1 28099877 28099877 1 + G C BLCA 28099873 + 28099853 28099893 41 CGGGGCCCTCGGGGCCCCAGCTCCGGGACTTCAGCAGCATC CGGGGCCCTCGGGGCCCCAGCTCCCGGACTTCAGCAGCATC < 41bp 0.836358656058538 0.607308074620993 0.8445456 0.50527525 prediction 0.458101162875091 Functional Loss - STX12 ENSG00000117758 CDS Human protein_coding chr1:28099873 chr1:28099877 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_75695 0 0 2 DDX3X POSTAR2 ENCODE chr1:28099820-28099887
64251 chr3 47384226 47384226 1 + C T CESC 47384224 + 47384204 47384244 41 TGAAGATGGACAGTGGTGACCTCGATGAGCTCGAATCGCAG TGAAGATGGACAGTGGTGACCTTGATGAGCTCGAATCGCAG < 41bp 0.729049694897136 0.427387812735956 0.7173791 0.11390221 prediction 0.458099389794272 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47384224 chr3:47384226 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_75697 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:47384214-47384234
64251 chr2 197541324 197541324 1 + G T ACC 197541321 + 197541301 197541341 41 ACCAGTGTATCCAGAAAGCACAGGATGCTGAAAAGAGAACA ACCAGTGTATCCAGAAAGCACAGTATGCTGAAAAGAGAACA < 41bp 0.729044191567865 0.345268804154483 0.32060754 0.32845742 prediction 0.45808838313573 Functional Loss - CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197541321 chr2:197541324 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_75701 0 0 1 DDX24 POSTAR2 ENCODE chr2:197541321-197541456
64251 chr16 19592878 19592878 1 + A C UCEC 19592877 + 19592857 19592897 41 AGGAGCTGTTGAACTTGACTCAGCAGGATTACGTGAACCGC AGGAGCTGTTGAACTTGACTCCGCAGGATTACGTGAACCGC < 41bp 0.812027334200467 0.58299699792405 0.5489999 0.2893561 prediction 0.458060672552834 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19592877 chr16:19592878 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_75708 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:19592873-19592904
64251 chr20 55949872 55949872 1 + G A rs41310034 55949869 + 55949849 55949889 41 TGGTCAAAGGTGAGAACTCCCGGGCCTGCTCTGGGTGCTCC TGGTCAAAGGTGAGAACTCCCGGACCTGCTCTGGGTGCTCC < 41bp 0.771794040207796 0.542763763055828 0.9110744 0.8320929 prediction 0.458060554303936 Functional Loss - RAE1 ENSG00000101146 CDS Human protein_coding chr20:55949869 chr20:55949872 synonymous SNV . 0 24 hm5C_associated_SNPs_75709 0 0 6 BUD13 POSTAR2 ENCODE chr20:55949821-55949902
64251 chr19 57802140 57802140 1 + G A GBM 57802137 + 57802117 57802157 41 TTGCCTGAGGAAGTCTCACTCCAGGAACAGCTGGCACAGGG TTGCCTGAGGAAGTCTCACTCCAAGAACAGCTGGCACAGGG < 41bp 0.756851947014506 0.527830457801746 0.46246475 0.11952096 prediction 0.45804297842552 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802137 chr19:57802140 synonymous SNV . 0 24 hm5C_associated_SNPs_75713 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57802079-57802161
64251 chr19 42796484 42796484 1 + C T UCEC 42796482 + 42796462 42796502 41 GTGCAGTCAGCGGGCGGGCACGCGCTGCCCCTGGGTACCAG GTGCAGTCAGCGGGCGGGCACGTGCTGCCCCTGGGTACCAG < 41bp 0.729015305106026 0.477415053510404 0.30395705 0.33215022 prediction 0.458030610212053 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42796482 chr19:42796484 nonsynonymous SNV 0.883 2 23 hm5C_associated_SNPs_75717 0 0 9 DDX24 POSTAR2 ENCODE chr19:42796455-42796500
64251 chr1 244218336 244218336 1 + G A COAD 244218333 + 244218313 244218353 41 GCCGCCGATGTCAACGTGCCCACGTGCTCGCTGTGTGGGAA GCCGCCGATGTCAACGTGCCCACATGCTCGCTGTGTGGGAA < 41bp 0.742127591979511 0.51311466699341 0.11682543 0.2688542 prediction 0.4580258499722 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218333 chr1:244218336 synonymous SNV . 0 24 hm5C_associated_SNPs_75718 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:244218320-244218340
64251 chr13 88328551 88328551 1 + C T ESCA 88328549 + 88328529 88328569 41 CCGCAGACGCCTTTGAGCACCACGGGGTATTTACACACCAC CCGCAGACGCCTTTGAGCACCATGGGGTATTTACACACCAC < 41bp 0.812138382445707 0.583125500047977 0.36892584 0.47363937 prediction 0.458025764795459 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328549 chr13:88328551 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_75719 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:88328508-88328562
64251 chr22 19119675 19119675 1 - C T COAD 19119678 - 19119658 19119698 41 GTGGAGCCGCTGGCTGACGTCGGGCTGCAGCATGCGGTAGA GTGGAGCCGCTGGCTGACGTCGGACTGCAGCATGCGGTAGA < 41bp 0.774809361054598 0.545800305393108 0.8935664 0.829586 prediction 0.45801811132298 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119678 chr22:19119675 nonsynonymous SNV 0.984 3 24 hm5C_associated_SNPs_75720 0 0 1 SLTM POSTAR2 ENCODE chr22:19119669-19119763
64251 chr17 19452969 19452969 1 + G A BRCA 19452966 + 19452946 19452986 41 AGGCTTACCCAGACCTATGTCACGATCTTCATTCCAGCTCT AGGCTTACCCAGACCTATGTCACAATCTTCATTCCAGCTCT < 41bp 0.759634731354659 0.530625973935923 0.25975543 0.09208068 prediction 0.458017514837471 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19452966 chr17:19452969 nonsynonymous SNV 0.913 0 24 hm5C_associated_SNPs_75721 0 0 2 GRWD1 POSTAR2 ENCODE chr17:19452946-19452992
64251 chr1 7837252 7837252 1 + G A SKCM 7837249 + 7837229 7837269 41 ATAATGCGAGTTAACGTGGACAAGGTTCTGGAAAGAGACCA ATAATGCGAGTTAACGTGGACAAAGTTCTGGAAAGAGACCA < 41bp 0.730857371198897 0.501850028885028 0.0912275 0.049110293 prediction 0.458014684627738 Functional Loss - VAMP3 ENSG00000049245 CDS Human protein_coding chr1:7837249 chr1:7837252 synonymous SNV . 0 24 hm5C_associated_SNPs_75724 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr1:7837228-7837269
64251 chr18 21033427 21033427 1 + G C UCEC 21033426 + 21033406 21033446 41 GGATCTGGTAGGAGTGGCATCGCCTGAGCCCGGGACGGCAG GGATCTGGTAGGAGTGGCATCCCCTGAGCCCGGGACGGCAG < 41bp 0.866445411311065 0.637452274490497 0.28783086 0.06674293 prediction 0.457986273641135 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21033426 chr18:21033427 synonymous SNV . 0 22 hm5C_associated_SNPs_75736 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:21033376-21033431
64251 chr1 25168518 25168518 1 + G T rs76330923 25168515 + 25168495 25168535 41 TATAAAAGAAAGATAAAACACAGGTCACCAATTTTCTCATT TATAAAAGAAAGATAAAACACAGTTCACCAATTTTCTCATT < 41bp 0.728990058725293 0.366707725600325 0.3049627 0.09445807 prediction 0.457980117450586 Functional Loss - CLIC4 ENSG00000169504 UTR3 Human protein_coding chr1:25168515 chr1:25168518 . . 0 24 hm5C_associated_SNPs_75738 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:25168433-25168814
64251 chr6 167711546 167711546 1 + G A SKCM 167711543 + 167711523 167711563 41 AGCAGCTGGTCTACACCCTCCTGGGCATCTACACTGGTACG AGCAGCTGGTCTACACCCTCCTGAGCATCTACACTGGTACG < 41bp 0.728977650996179 0.47500684623778 0.33035985 0.09397966 prediction 0.457955301992358 Functional Loss - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167711543 chr6:167711546 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75744 0 0 1 BUD13 POSTAR2 ENCODE chr6:167711509-167711582
64251 chr2 157407168 157407168 1 + C T STAD 157407166 + 157407146 157407186 41 ATCAATGCCACGGGACCTTTCACGGACTCTGTGCGCAAAAT ATCAATGCCACGGGACCTTTCATGGACTCTGTGCGCAAAAT < 41bp 0.728977638708306 0.44218271004683 0.5107824 0.56102836 prediction 0.457955277416612 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407166 chr2:157407168 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_75745 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157407145-157407179
64251 chr2 157407169 157407169 1 + G A UCEC 157407166 + 157407146 157407186 41 ATCAATGCCACGGGACCTTTCACGGACTCTGTGCGCAAAAT ATCAATGCCACGGGACCTTTCACAGACTCTGTGCGCAAAAT < 41bp 0.728977638708306 0.487415719926139 0.5107824 0.22045845 prediction 0.457955277416612 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407166 chr2:157407169 synonymous SNV . 0 24 hm5C_associated_SNPs_75746 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157407145-157407179
64251 chr7 87564433 87564433 1 + G T LUAD 87564431 + 87564411 87564451 41 ACTGCGCCTCATCTACCGCTCGGGCGGCGAAGACGAAAGTC ACTGCGCCTCATCTACCGCTCGTGCGGCGAAGACGAAAGTC < 41bp 0.728977403624463 0.390814746796716 0.9096067 0.47867408 prediction 0.457954807248926 Functional Loss - ADAM22 ENSG00000008277 CDS Human protein_coding chr7:87564431 chr7:87564433 nonsynonymous SNV 0.286 2 23 hm5C_associated_SNPs_75747 0 0 1 PPIG POSTAR2 ENCODE chr7:87564420-87564499
64251 chr1 6679955 6679955 1 + G A CESC 6679952 + 6679932 6679972 41 GACGCGGGTTTCTCAGACATCGCGTCCTCAGTGCCCTTGCC GACGCGGGTTTCTCAGACATCGCATCCTCAGTGCCCTTGCC < 41bp 0.728968781421693 0.48785756753375 0.17755127 0.09367043 prediction 0.457937562843386 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6679952 chr1:6679955 synonymous SNV . 0 24 hm5C_associated_SNPs_75752 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:6679913-6679962
64251 chr17 14207283 14207283 1 + G A rs76109634 14207280 + 14207260 14207300 41 GCAAGCTATGGAAATCCCCACAGGAAGGCTCACGCAGTCTC GCAAGCTATGGAAATCCCCACAGAAAGGCTCACGCAGTCTC < 41bp 0.756284048510431 0.527317502471311 0.7459381 0.2936922 prediction 0.457933092078239 Functional Loss - MGC12916 ENSG00000266709 ncRNA_exonic Human lincRNA chr17:14207280 chr17:14207283 . . 0 24 hm5C_associated_SNPs_75754 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:14207272-14207300
64251 chr12 67699358 67699358 1 + G T LUAD 67699355 + 67699335 67699375 41 AAAGGCATTGACACTGATTGCTGGGTCACCTTTGAAGATAG AAAGGCATTGACACTGATTGCTGTGTCACCTTTGAAGATAG < 41bp 0.728960869630469 0.344138933348256 0.34033167 0.10939106 prediction 0.457921739260939 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699355 chr12:67699358 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75757 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:67699340-67699360
64251 chr17 40174518 40174518 1 + C T UCEC 40174515 + 40174495 40174535 41 GTTTCTATGACACCCGGGGGCTCCGAGATGGGGCCGAACTG GTTTCTATGACACCCGGGGGCTCTGAGATGGGGCCGAACTG < 41bp 0.728955582041244 0.495865856973585 0.29906777 0.30624598 prediction 0.457911164082488 Functional Loss - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40174515 chr17:40174518 stopgain 0.997 1 24 hm5C_associated_SNPs_75758 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr17:40174470-40174519
64251 chr4 95377418 95377418 1 + C T rs190069211 95377416 + 95377396 95377436 41 CTGGAGTGCAGTGGCGCAATCTCGGCTCACCACAACCTCCA CTGGAGTGCAGTGGCGCAATCTTGGCTCACCACAACCTCCA < 41bp 0.748483842533075 0.519528373274842 0.3754954 0.3850622 prediction 0.457910938516465 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95377416 chr4:95377418 synonymous SNV . 0 23 hm5C_associated_SNPs_75759 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr4:95377405-95377426
64251 chr12 101777002 101777002 1 + G A rs148427016 101776999 + 101776979 101777019 41 AGGAAGAGGTGAAGGAAGAGCTCGGCAGGCCGGCCACGCTG AGGAAGAGGTGAAGGAAGAGCTCAGCAGGCCGGCCACGCTG < 41bp 0.743116585535672 0.514161279250748 0.5813707 0.36024308 prediction 0.457910612569848 Functional Loss - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101776999 chr12:101777002 nonsynonymous SNV 0.010 0 24 hm5C_associated_SNPs_75761 0 0 9 AGGF1 POSTAR2 ENCODE chr12:101776899-101777071
64251 chr19 39200089 39200089 1 + G A BLCA 39200086 + 39200066 39200106 41 TCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTG TCGAAGTGGCTGAGAAATACCTCAACATCCCCAAGATGCTG < 41bp 0.728954077143483 0.490363374507963 0.24276593 0.1604034 prediction 0.457908154286966 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39200086 chr19:39200089 nonsynonymous SNV 0.964 2 24 hm5C_associated_SNPs_75762 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr19:39200035-39200094
64251 chrX 24227093 24227093 1 + C T BLCA 24227091 + 24227071 24227111 41 ACATAGATGAGTCTGCTGGCCTCGGCAGACTGGCTAAACAA ACATAGATGAGTCTGCTGGCCTTGGCAGACTGGCTAAACAA < 41bp 0.72895356151854 0.444805985866523 0.047084153 0.05384752 prediction 0.45790712303708 Functional Loss - ZFX ENSG00000005889 CDS Human protein_coding chrX:24227091 chrX:24227093 synonymous SNV . 0 23 hm5C_associated_SNPs_75763 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:24227069-24227093
64251 chr2 220098575 220098575 1 + C T SKCM 220098573 + 220098553 220098593 41 ACCCCTGCAAAGGGGGGATCCCCGACTTTGGGATATCCCCC ACCCCTGCAAAGGGGGGATCCCTGACTTTGGGATATCCCCC < 41bp 0.72895225470522 0.444591156971118 0.61515975 0.6083874 prediction 0.457904509410439 Functional Loss - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220098573 chr2:220098575 stopgain 0.999 1 23 hm5C_associated_SNPs_75766 0 0 2 FXR2 POSTAR2 ENCODE chr2:220098527-220098607
64251 chr14 57101670 57101670 1 + G T UCEC 57101667 + 57101647 57101687 41 CAATGAAGAAATGTGGCAAGCGAGGTGACTATTCTACATTT CAATGAAGAAATGTGGCAAGCGATGTGACTATTCTACATTT < 41bp 0.728939387946223 0.352816168614427 0.85358614 0.092708915 prediction 0.457878775892446 Functional Loss - TMEM260 ENSG00000070269 CDS Human protein_coding chr14:57101667 chr14:57101670 nonsynonymous SNV 0.923 4 24 hm5C_associated_SNPs_75771 0 0 1 BUD13 POSTAR2 ENCODE chr14:57101590-57101687
64251 chr8 133849985 133849985 1 + G T SARC 133849983 + 133849963 133850003 41 GAGTGCTTGTGTTGGCAACACAGCGTGTGCATGGGGCTGCT GAGTGCTTGTGTTGGCAACACATCGTGTGCATGGGGCTGCT < 41bp 0.728938401550882 0.38897134664465 0.12160441 0.08575678 prediction 0.457876803101765 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133849983 chr8:133849985 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_75772 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133849954-133850035
64251 chr2 176973690 176973690 1 + C T GBM 176973688 + 176973668 176973708 41 CCTATACCAAGTACCAGATCCGCGAACTGGAACGCGAGTTT CCTATACCAAGTACCAGATCCGTGAACTGGAACGCGAGTTT < 41bp 0.728937938825339 0.459417554562935 0.33131295 0.3040225 prediction 0.457875877650677 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973688 chr2:176973690 synonymous SNV . 0 23 hm5C_associated_SNPs_75773 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176973620-176973720
64251 chr2 220046874 220046874 1 + G A SKCM 220046871 + 220046851 220046891 41 CTGTCAAGGCAAGCCCTGGACTCGGAGGAAGAGGAAGAGGA CTGTCAAGGCAAGCCCTGGACTCAGAGGAAGAGGAAGAGGA < 41bp 0.737423125679373 0.508489265370188 0.23911473 0.16466963 prediction 0.457867720618371 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046871 chr2:220046874 synonymous SNV . 0 24 hm5C_associated_SNPs_75774 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220046834-220046884
64251 chr16 2809575 2809575 1 + G A UCEC 2809572 + 2809552 2809592 41 GTGGTGGTCTTCCTTCAGGTCTCGAAGTACAACACCAGCCC GTGGTGGTCTTCCTTCAGGTCTCAAAGTACAACACCAGCCC < 41bp 0.766812778597206 0.537880909184351 0.8717608 0.14932793 prediction 0.457863738825711 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2809572 chr16:2809575 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_75777 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:2809560-2809580
64251 chr4 146435918 146435918 1 + G T LUSC 146435916 + 146435896 146435936 41 AGAAAGGTGCCATGGAGGAACTGGAAAAGGCCTTGAGCTGC AGAAAGGTGCCATGGAGGAACTTGAAAAGGCCTTGAGCTGC < 41bp 0.888472596997111 0.659541150829147 0.39150608 0.34211692 prediction 0.457862892335929 Functional Loss - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146435916 chr4:146435918 synonymous SNV . 0 23 hm5C_associated_SNPs_75778 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr4:146435894-146435932
64251 chr7 134346544 134346544 1 + G A BRCA 134346541 + 134346521 134346561 41 AATGAGCGTCACTATGGGGCCTTGATCGGTCTCAACAGGGA AATGAGCGTCACTATGGGGCCTTAATCGGTCTCAACAGGGA < 41bp 0.746303779516578 0.517374849740652 0.032456815 0.04254195 prediction 0.457857859551853 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346541 chr7:134346544 synonymous SNV . 0 24 hm5C_associated_SNPs_75780 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:134346503-134346544
64251 chr6 123117003 123117003 1 + T C COAD 123117002 + 123116982 123117022 41 ATTTGATTTTATTAAAAATTCTGGACAAGAAGCATCTTTCA ATTTGATTTTATTAAAAATTCCGGACAAGAAGCATCTTTCA < 41bp 0.728928201671613 0.496962576011394 0.13048553 0.22015992 prediction 0.457856403343227 Functional Loss - SMPDL3A ENSG00000172594 CDS Human protein_coding chr6:123117002 chr6:123117003 synonymous SNV . 0 22 hm5C_associated_SNPs_75781 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:123116969-123117007
64251 chr16 29820130 29820130 1 + G A STAD 29820127 + 29820107 29820147 41 CGCCTGGCCAGACGCCTTGCCACGGATACGGGTTAAGGGTG CGCCTGGCCAGACGCCTTGCCACAGATACGGGTTAAGGGTG < 41bp 0.781958555530876 0.553030862454348 0.6258698 0.35107678 prediction 0.457855386153056 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820127 chr16:29820130 synonymous SNV . 0 24 hm5C_associated_SNPs_75782 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:29820120-29820140
64251 chr2 219677673 219677673 1 + G A rs190012697 219677670 + 219677650 219677690 41 AGAAGCTGATTGATGAGAAGCTCGAAGATATGGAGGCCCAA AGAAGCTGATTGATGAGAAGCTCAAAGATATGGAGGCCCAA < 41bp 0.774836925171332 0.545921133414236 0.25357643 0.28771248 prediction 0.457831583514192 Functional Loss - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677670 chr2:219677673 nonsynonymous SNV 0.043 0 24 hm5C_associated_SNPs_75790 1 0 3 LIN28B POSTAR2 ENCODE chr2:219677657-219677713
64251 chr1 156027849 156027849 1 + C T LUAD 156027847 + 156027827 156027867 41 AGACCGTGGGCTTTGGAATGCTCAAGGCCAAGGTGTGTATG AGACCGTGGGCTTTGGAATGCTTAAGGCCAAGGTGTGTATG < 41bp 0.836409115843538 0.607495773008169 0.2112379 0.077744514 prediction 0.457826685670738 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156027847 chr1:156027849 synonymous SNV . 0 23 hm5C_associated_SNPs_75791 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156027845-156027910
64251 chr12 53687097 53687097 1 + G A KIRP 53687094 + 53687074 53687114 41 ATCTCTGGGATGTGACTGACCGCGACATTGACCGCTACACG ATCTCTGGGATGTGACTGACCGCAACATTGACCGCTACACG < 41bp 0.763127721654903 0.534224726054455 0.17465195 0.1163674 prediction 0.457805991200895 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53687094 chr12:53687097 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_75795 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:53687073-53687097
64251 chr20 13765904 13765904 1 + G T BLCA 13765901 + 13765881 13765921 41 AGAACTGGGCAGCCCGGCAGCCCGAGCCGACCAAATTTGAC AGAACTGGGCAGCCCGGCAGCCCTAGCCGACCAAATTTGAC < 41bp 0.728877753514078 0.349684286159254 0.09872368 0.039064646 prediction 0.457755507028155 Functional Loss - NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13765901 chr20:13765904 stopgain 0.526 0 24 hm5C_associated_SNPs_75810 0 0 7 FBL POSTAR2 GSE43666,GSM1067865 chr20:13765880-13765909
64251 chr2 198339136 198339136 1 + A C rs186535488 198339135 + 198339115 198339155 41 AGTAAAAACTTTGGGCTGGGCACAGTGGCTCACACCTGTAA AGTAAAAACTTTGGGCTGGGCCCAGTGGCTCACACCTGTAA < 41bp 0.798007643411155 0.569132197715748 0.21989468 0.16499323 prediction 0.457750891390814 Functional Loss - COQ10B ENSG00000115520 UTR3 Human protein_coding chr2:198339135 chr2:198339136 . . 0 22 hm5C_associated_SNPs_75812 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:198339107-198339137
64251 chr3 9425908 9425908 1 + G T UCEC 9425905 + 9425885 9425925 41 TTCTATTATAGGATGGGATCCAAGAAGAGAAACTGGAACCT TTCTATTATAGGATGGGATCCAATAAGAGAAACTGGAACCT < 41bp 0.728874832556553 0.35620045111586 0.39158 0.1481319 prediction 0.457749665113105 Functional Loss - THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9425905 chr3:9425908 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_75813 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:9425894-9425908
64251 chr7 38259225 38259225 1 + G T LIHC 38259223 + 38259203 38259243 41 ACTTATACCTGGTGGTCTTTCTGATGGTCAGTTTTATTCCC ACTTATACCTGGTGGTCTTTCTTATGGTCAGTTTTATTCCC < 41bp 0.72887432493372 0.390343647843969 0.39577332 0.17602873 prediction 0.45774864986744 Functional Loss - STARD3NL ENSG00000010270 CDS Human protein_coding chr7:38259223 chr7:38259225 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75815 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:38259180-38259226
64251 chr14 93264048 93264048 1 + G A UCEC 93264045 + 93264025 93264065 41 TGCAAATGTGAAAGTAGGATCTCGGACACCAGTAGAGGCCT TGCAAATGTGAAAGTAGGATCTCAGACACCAGTAGAGGCCT < 41bp 0.763448969389298 0.534581644931253 0.39548698 0.35601425 prediction 0.457734648916089 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93264045 chr14:93264048 nonsynonymous SNV 0.931 1 24 hm5C_associated_SNPs_75819 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93264019-93264069
64251 chr3 128516835 128516835 1 + A C CESC 128516831 + 128516811 128516851 41 CAGTATGTGAATAAGAAATTCAGCAATCAGTACAAAGCCAC CAGTATGTGAATAAGAAATTCAGCCATCAGTACAAAGCCAC < 41bp 0.72886243678358 0.310011725307298 0.10143331 0.07274279 prediction 0.45772487356716 Functional Loss - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128516831 chr3:128516835 nonsynonymous SNV 0.931 1 25 hm5C_associated_SNPs_75823 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:128516791-128516889
64251 chr3 128516832 128516832 1 + A C HNSC 128516831 + 128516811 128516851 41 CAGTATGTGAATAAGAAATTCAGCAATCAGTACAAAGCCAC CAGTATGTGAATAAGAAATTCCGCAATCAGTACAAAGCCAC < 41bp 0.72886243678358 0.479113577987006 0.10143331 0.06806591 prediction 0.45772487356716 Functional Loss - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128516831 chr3:128516832 nonsynonymous SNV 0.974 1 22 hm5C_associated_SNPs_75824 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:128516791-128516889
64251 chr3 128516833 128516833 1 + G T TGCT 128516831 + 128516811 128516851 41 CAGTATGTGAATAAGAAATTCAGCAATCAGTACAAAGCCAC CAGTATGTGAATAAGAAATTCATCAATCAGTACAAAGCCAC < 41bp 0.72886243678358 0.403726538234068 0.10143331 0.06676841 prediction 0.45772487356716 Functional Loss - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128516831 chr3:128516833 nonsynonymous SNV 0.946 1 23 hm5C_associated_SNPs_75825 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:128516791-128516889
64251 chr22 39078362 39078362 1 + T C COAD 39078361 + 39078341 39078381 41 TGTCGGAGAGACTATGGGGCCTGACGGAGATGTTTCCGGAG TGTCGGAGAGACTATGGGGCCCGACGGAGATGTTTCCGGAG < 41bp 0.733173655230629 0.504314244559895 0.17314893 0.0763599 prediction 0.457718821341468 Functional Loss - TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078361 chr22:39078362 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_75826 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:39078326-39078364
64251 chr1 207307905 207307905 1 + C T UCEC 207307903 + 207307883 207307923 41 GCTATATGCCAAGGAGATGGCACGTGGAGTCCCCGAACACC GCTATATGCCAAGGAGATGGCATGTGGAGTCCCCGAACACC < 41bp 0.728853629342364 0.467924182814099 0.17881641 0.13993773 prediction 0.457707258684729 Functional Loss - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207307903 chr1:207307905 nonsynonymous SNV 0.084 3 23 hm5C_associated_SNPs_75827 0 0 2 SND1 POSTAR2 ENCODE chr1:207307896-207307930
64251 chr1 156146722 156146722 1 + G A SKCM 156146719 + 156146699 156146739 41 GAGCAACACCTCCAGTCTCCCAAGGAATGCAGGACCTCTGC GAGCAACACCTCCAGTCTCCCAAAGAATGCAGGACCTCTGC < 41bp 0.775463249111261 0.546614685664153 0.81306267 0.21737906 prediction 0.457697126894214 Functional Loss - SEMA4A ENSG00000196189 CDS Human protein_coding chr1:156146719 chr1:156146722 synonymous SNV . 0 24 hm5C_associated_SNPs_75828 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156146720-156146777
64251 chr9 139887582 139887582 1 + C T UCEC 139887580 + 139887560 139887600 41 CTGACGCTTTCAGGGGGGCCCTCGGCACTGGCCTTTGACCT CTGACGCTTTCAGGGGGGCCCTTGGCACTGGCCTTTGACCT < 41bp 0.728844812272493 0.468565567100153 0.4250161 0.35673034 prediction 0.457689624544987 Functional Loss - C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887580 chr9:139887582 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_75832 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:139887562-139887592
64251 chr6 168351990 168351990 1 + T C COAD 168351989 + 168351969 168352009 41 GGATAAATCAGAGCTCCTCACTGGACTCCAGTACCTCTAGC GGATAAATCAGAGCTCCTCACCGGACTCCAGTACCTCTAGC < 41bp 0.728844331520629 0.486144976272011 0.41641253 0.53839093 prediction 0.457688663041258 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168351989 chr6:168351990 nonsynonymous SNV 0.334 1 22 hm5C_associated_SNPs_75833 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168351941-168352001
64251 chr7 102106473 102106473 1 + G T UCEC 102106471 + 102106451 102106491 41 TTCCCCAAGCTCGAGGAACTCAGCCTGGAGGGCAACCCCTT TTCCCCAAGCTCGAGGAACTCATCCTGGAGGGCAACCCCTT < 41bp 0.728838033144775 0.371976875353281 0.5564192 0.66029036 prediction 0.45767606628955 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102106471 chr7:102106473 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_75838 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:102106461-102106498
64251 chr1 173726238 173726238 1 + A C UCEC 173726234 + 173726214 173726254 41 GCGGAGTTGGGGTCAGTGTTCTTGATGATCTGTTATATGCA GCGGAGTTGGGGTCAGTGTTCTTGCTGATCTGTTATATGCA < 41bp 0.728836997897832 0.31098714836607 0.16749752 0.20320398 prediction 0.457673995795663 Functional Loss - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173726234 chr1:173726238 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_75839 0 0 1 UCHL5 POSTAR2 ENCODE chr1:173726201-173726254
64251 chr17 4790994 4790994 1 + A C COAD 4790990 + 4790970 4791010 41 AGCAGCAGCTGCAGCAGCAGCAGCAGCGAGACCCCGAGGCA AGCAGCAGCTGCAGCAGCAGCAGCCGCGAGACCCCGAGGCA < 41bp 0.728833912723332 0.356237472657772 0.31816804 0.20076632 prediction 0.457667825446665 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4790990 chr17:4790994 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_75841 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4790960-4790996
64251 chr3 122514299 122514299 1 + G A GBM 122514296 + 122514276 122514316 41 GCGCCAGGCCTACGGCTTCTCCAGCTGGGACATCGCGCTGC GCGCCAGGCCTACGGCTTCTCCAACTGGGACATCGCGCTGC < 41bp 0.728826696201059 0.484183516334264 0.7035778 0.32872874 prediction 0.457653392402118 Functional Loss - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122514296 chr3:122514299 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_75846 0 0 1 RPS3 POSTAR2 ENCODE chr3:122514281-122514342
64251 chr1 68152171 68152171 1 + G A rs149179509 68152168 + 68152148 68152188 41 AACATCCTGCGCGTCAGCAACCCGGGCCGGCTGGCGGAGCT AACATCCTGCGCGTCAGCAACCCAGGCCGGCTGGCGGAGCT < 41bp 0.728826047063038 0.488387432040632 0.7511077 0.26979202 prediction 0.457652094126076 Functional Loss - GADD45A ENSG00000116717 CDS Human protein_coding chr1:68152168 chr1:68152171 synonymous SNV . 0 24 hm5C_associated_SNPs_75848 0 0 1 GRWD1 POSTAR2 ENCODE chr1:68152096-68152213
64251 chr7 94917904 94917904 1 + G T LUSC 94917902 + 94917882 94917922 41 AGTGTCAGAATCGGGCCGTTCAGGAATGGAGTGTGCAGCAG AGTGTCAGAATCGGGCCGTTCATGAATGGAGTGTGCAGCAG < 41bp 0.728822845002393 0.40719727005762 0.6655432 0.13464344 prediction 0.457645690004785 Functional Loss - PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917902 chr7:94917904 nonsynonymous SNV 0.281 0 23 hm5C_associated_SNPs_75850 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr3 127379692 127379692 1 + G A HNSC 127379689 + 127379669 127379709 41 GGCCACAGTGCTGCCAGCTGCAGGGCTTGGGGTAGAGTTCG GGCCACAGTGCTGCCAGCTGCAGAGCTTGGGGTAGAGTTCG < 41bp 0.797234167392753 0.568415045608061 0.8854444 0.6186541 prediction 0.457638243569383 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379689 chr3:127379692 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_75851 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:127379667-127379699
64251 chr11 608545 608545 1 + C T CESC 608543 + 608523 608563 41 TCTGAATCCAGGGACAGGAGCTCGAGGTCAGCGTCACCATC TCTGAATCCAGGGACAGGAGCTTGAGGTCAGCGTCACCATC < 41bp 0.807866277380414 0.579063752833806 0.5082334 0.3010978 prediction 0.457605049093215 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608543 chr11:608545 nonsynonymous SNV 0.326 3 23 hm5C_associated_SNPs_75857 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr11:608516-608546
64251 chr20 2636146 2636146 1 + C T UCEC 2636144 + 2636124 2636164 41 TAAGGCTATTCTGGATGCCTCACGGTCCTCCATGGGTCAGT TAAGGCTATTCTGGATGCCTCATGGTCCTCCATGGGTCAGT < 41bp 0.728799769626605 0.469947912377139 0.09046051 0.19318101 prediction 0.457599539253209 Functional Loss - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2636144 chr20:2636146 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_75860 0 0 22 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:2636128-2636147
64251 chr6 26463619 26463619 1 + C T BLCA 26463617 + 26463597 26463637 41 GCGCCTGCCCTGAAAGAGGTCTCCATGCCTGATGCAGACGG GCGCCTGCCCTGAAAGAGGTCTTCATGCCTGATGCAGACGG < 41bp 0.860202096073644 0.631403125237171 0.9499793 0.35919145 prediction 0.457597941672947 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26463617 chr6:26463619 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_75861 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:26463601-26463624
64251 chr11 64126759 64126759 1 + G T UCEC 64126757 + 64126737 64126777 41 CGCCGTGGAGCTGCGGATCACAGAAGGTGGGTGTGGGGCCT CGCCGTGGAGCTGCGGATCACATAAGGTGGGTGTGGGGCCT < 41bp 0.8970212254891 0.668222282674896 0.8675776 0.41634193 prediction 0.457597885628409 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64126757 chr11:64126759 stopgain 0.969 0 23 hm5C_associated_SNPs_75862 0 0 2 DDX3X POSTAR2 ENCODE chr11:64126642-64126761
64251 chr1 26507079 26507079 1 + G T LUSC 26507077 + 26507057 26507097 41 CACCAGGAGCTCATCCTGGGCGGGGTGGAACAGCTCCAGGC CACCAGGAGCTCATCCTGGGCGTGGTGGAACAGCTCCAGGC < 41bp 0.905048088535065 0.676250911370318 0.9104364 0.7394019 prediction 0.457594354329495 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26507077 chr1:26507079 nonsynonymous SNV 0.683 4 23 hm5C_associated_SNPs_75864 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:26507060-26507098
64251 chr15 89169569 89169569 1 + G A HNSC 89169566 + 89169546 89169586 41 CAGCACCAGCGGTTCATGGCCCGGAAGGCCTTGCTGCAGGA CAGCACCAGCGGTTCATGGCCCGAAAGGCCTTGCTGCAGGA < 41bp 0.782786322534558 0.553992237381468 0.59489197 0.41340658 prediction 0.457588170306179 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169566 chr15:89169569 synonymous SNV . 0 24 hm5C_associated_SNPs_75867 0 0 2 BUD13 POSTAR2 ENCODE chr15:89169562-89169613
64251 chr4 154387597 154387597 1 + G C rs71620317 154387593 + 154387573 154387613 41 GCCCGGCTGCTACTGCCGCACCGCGGCGGCCGTGAACCTCC GCCCGGCTGCTACTGCCGCACCGCCGCGGCCGTGAACCTCC < 41bp 0.728791565527264 0.450129521484378 0.45863003 0.11342877 prediction 0.457583131054528 Functional Loss - TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154387593 chr4:154387597 synonymous SNV . 0 25 hm5C_associated_SNPs_75869 0 0 1 DDX3X POSTAR2 ENCODE chr4:154387576-154387625
64251 chr15 90996087 90996087 1 + G A UCEC 90996084 + 90996064 90996104 41 CTGTTTTGGAACTGATGAATCCCGAAGCCCAGCTGCCCCAG CTGTTTTGGAACTGATGAATCCCAAAGCCCAGCTGCCCCAG < 41bp 0.774231446908977 0.545446105512349 0.78281754 0.3434273 prediction 0.457570682793255 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:90996084 chr15:90996087 nonsynonymous SNV 0.975 1 24 hm5C_associated_SNPs_75872 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90996042-90996088
64251 chr5 94027907 94027907 1 + G A STAD 94027904 + 94027884 94027924 41 TGGACGGGGTGACTCCTTTGCATGATGCACTGTCAAACGGA TGGACGGGGTGACTCCTTTGCATAATGCACTGTCAAACGGA < 41bp 0.728778751032778 0.493117197523453 0.5444817 0.27526903 prediction 0.457557502065555 Functional Loss - SLF1 ENSG00000133302 CDS Human protein_coding chr5:94027904 chr5:94027907 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_75878 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:94027900-94027920
64251 chr19 56128118 56128118 1 + G C rs61738853 56128114 + 56128094 56128134 41 TGGCGCACAAGGCCGAGAACCTCGGGGGGCCTGGAGCAGGG TGGCGCACAAGGCCGAGAACCTCGCGGGGCCTGGAGCAGGG < 41bp 0.828265579583376 0.599492195340598 0.7395546 0.19641054 prediction 0.457546768485556 Functional Loss - ZNF865 ENSG00000261221 CDS Human protein_coding chr19:56128114 chr19:56128118 nonsynonymous SNV 0.374 0 25 hm5C_associated_SNPs_75884 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56128110-56128155
64251 chr4 155490382 155490382 1 + G T LUSC 155490380 + 155490360 155490400 41 GACGGTAGTGTTGACTTTGGCAGGAAATGGGATCCATATAA GACGGTAGTGTTGACTTTGGCATGAAATGGGATCCATATAA < 41bp 0.893297417799944 0.664527956712152 0.90773 0.2835173 prediction 0.457538922175585 Functional Loss - FGB ENSG00000171564 CDS Human protein_coding chr4:155490380 chr4:155490382 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_75886 0 0 3 RPS3 POSTAR2 ENCODE chr4:155490340-155490400
64251 chr13 113508844 113508844 1 + G A BLCA 113508841 + 113508821 113508861 41 CCTGACCAGAGACAACCTGTCCGGGTAGGCAGCGCGTCCCC CCTGACCAGAGACAACCTGTCCGAGTAGGCAGCGCGTCCCC < 41bp 0.728766014596554 0.48564778884552 0.6820005 0.053209513 prediction 0.457532029193109 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113508841 chr13:113508844 nonsynonymous SNV 0.119 1 24 hm5C_associated_SNPs_75889 0 0 2 EFTUD2 POSTAR2 ENCODE chr13:113508809-113508868
64251 chr14 24769917 24769917 1 + T C COAD 24769916 + 24769896 24769936 41 AGACCCTGGAGGAGCTGGTCCTGGGACTAGCCGCTGAGGTG AGACCCTGGAGGAGCTGGTCCCGGGACTAGCCGCTGAGGTG < 41bp 0.771011636765723 0.542248372775874 0.5966137 0.89397275 prediction 0.457526527979697 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24769916 chr14:24769917 nonsynonymous SNV 0.963 4 22 hm5C_associated_SNPs_75893 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24769884-24769934
64251 chr3 52239986 52239986 1 + C T GBM 52239984 + 52239964 52240004 41 GATGCCGCACTCTTGTTTTCCTCGTGCTTTGTGGCCAATGA GATGCCGCACTCTTGTTTTCCTTGTGCTTTGTGGCCAATGA < 41bp 0.728758924156636 0.438824172128878 0.157724 0.16107848 prediction 0.457517848313272 Functional Loss - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52239984 chr3:52239986 nonsynonymous SNV 0.971 5 23 hm5C_associated_SNPs_75895 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52239934-52240003
64251 chr17 47886538 47886538 1 + G A GBM 47886535 + 47886515 47886555 41 AAAGGATGCTGTCTCACAGGCAAGATGACAACAACAGGCAT AAAGGATGCTGTCTCACAGGCAAAATGACAACAACAGGCAT < 41bp 0.748034670644009 0.519280019097819 0.2743024 0.09857449 prediction 0.457509303092379 Functional Loss - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47886535 chr17:47886538 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_75902 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47886506-47886541
64251 chrX 47101902 47101902 1 + C T LGG 47101900 + 47101880 47101920 41 TGTGTGGCTCTGTCCAAACACACGGGCATCTCGCCAGAGAG TGTGTGGCTCTGTCCAAACACATGGGCATCTCGCCAGAGAG < 41bp 0.822950055569425 0.594197691814602 0.3230713 0.41624883 prediction 0.457504727509646 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101900 chrX:47101902 nonsynonymous SNV 0.674 3 23 hm5C_associated_SNPs_75904 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:47101891-47101916
64251 chr17 14205168 14205168 1 + G A rs62636622 14205165 + 14205145 14205185 41 ATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCAGAGTCCCGA ATGGCCGAGGGCGCTGCGAGCCCAGAGGAGCAGAGTCCCGA < 41bp 0.778066852824448 0.54931645766757 0.3903097 0.25072265 prediction 0.457500790313756 Functional Loss - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14205165 chr17:14205168 synonymous SNV . 0 24 hm5C_associated_SNPs_75905 0 0 3 DDX3X POSTAR2 ENCODE chr17:14205168-14205187
64251 chr6 41757059 41757059 1 + G A COAD 41757056 + 41757036 41757076 41 TGACCTCATGGCACCTCAGCCAGGGGTGTAGCCAAGTAGGT TGACCTCATGGCACCTCAGCCAGAGGTGTAGCCAAGTAGGT < 41bp 0.741631465816348 0.512881699885304 0.92336166 0.90517056 prediction 0.457499531862088 Functional Loss - TOMM6 ENSG00000214736 CDS Human protein_coding chr6:41757056 chr6:41757059 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_75907 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:41756976-41757069
64251 chr19 11022924 11022924 1 + G A UCEC 11022921 + 11022901 11022941 41 TTTTGCCGCCCAAGCTGGAGCACGGAAAATCTACGCGGTGG TTTTGCCGCCCAAGCTGGAGCACAGAAAATCTACGCGGTGG < 41bp 0.775579730064777 0.546832220841969 0.32916245 0.18707386 prediction 0.457495018445616 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11022921 chr19:11022924 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_75908 0 0 1 DDX3X POSTAR2 ENCODE chr19:11022915-11022960
64251 chr19 6750315 6750315 1 + G T BLCA 6750313 + 6750293 6750333 41 CTCCTCCCAGGCGTGGCTGGCAGAAGCTGAAAGTCGAGTCC CTCCTCCCAGGCGTGGCTGGCATAAGCTGAAAGTCGAGTCC < 41bp 0.728746057257455 0.362882778384647 0.8920547 0.32733572 prediction 0.457492114514909 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750313 chr19:6750315 stopgain 0.997 1 23 hm5C_associated_SNPs_75909 0 0 8 DDX24 POSTAR2 ENCODE chr19:6750301-6750362
64251 chr2 61391524 61391524 1 + T C UCEC 61391523 + 61391503 61391543 41 GAAAATACACACATCTGTCACTAGAACTCCTTCAGTTGTTG GAAAATACACACATCTGTCACCAGAACTCCTTCAGTTGTTG < 41bp 0.728745644928163 0.499810355049644 0.07580164 0.12970734 prediction 0.457491289856325 Functional Loss - C2orf74 ENSG00000237651 CDS Human protein_coding chr2:61391523 chr2:61391524 synonymous SNV . 0 22 hm5C_associated_SNPs_75910 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:61391512-61391537
64251 chr18 33738801 33738801 1 + G T BLCA 33738798 + 33738778 33738818 41 TATTATATTTTCTATTCTAGCAAGATAGTGATCTTCCAGAA TATTATATTTTCTATTCTAGCAATATAGTGATCTTCCAGAA < 41bp 0.728745179579069 0.363677233169209 0.43283683 0.10197067 prediction 0.457490359158139 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33738798 chr18:33738801 nonsynonymous SNV 0.096 0 24 hm5C_associated_SNPs_75912 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr18:33738801-33738802
64251 chr20 57768967 57768967 1 + G A UCEC 57768964 + 57768944 57768984 41 CCTGGGGACCAAGGCACAGCCAGGACTCTCTCTGCAGCAGT CCTGGGGACCAAGGCACAGCCAGAACTCTCTCTGCAGCAGT < 41bp 0.78463730910729 0.555894521488856 0.86535716 0.39659 prediction 0.457485575236868 Functional Loss - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57768964 chr20:57768967 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_75916 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:57768906-57768992
64251 chr21 45733838 45733838 1 + G T SARC 45733835 + 45733815 45733855 41 GCACTGGCCTCAGGGGCCGACTGGCTGTTCATCCCCGAGGC GCACTGGCCTCAGGGGCCGACTGTCTGTTCATCCCCGAGGC < 41bp 0.728738900547355 0.335701219824887 0.33565715 0.22736171 prediction 0.457477801094709 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45733835 chr21:45733838 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_75917 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr21:45733815-45733840
64251 chr19 18700384 18700384 1 + C T BLCA 18700382 + 18700362 18700402 41 ACCCAGGCCTTCGCCGCCGCCTCGCGGGAGGTGCTGGCGGT ACCCAGGCCTTCGCCGCCGCCTTGCGGGAGGTGCTGGCGGT < 41bp 0.795593803016903 0.566856167989337 0.19721958 0.18123826 prediction 0.457475270055131 Functional Loss - C19orf60 ENSG00000006015 CDS Human protein_coding chr19:18700382 chr19:18700384 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_75918 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18700365-18700408
64251 chr15 77770713 77770713 1 + C T UCEC 77770711 + 77770691 77770731 41 GGAATGCAGCCCTGCAAAAGCACGTGGAGAGCATGCGCACA GGAATGCAGCCCTGCAAAAGCATGTGGAGAGCATGCGCACA < 41bp 0.825951082495692 0.597216970067786 0.20979041 0.15183699 prediction 0.457468224855813 Functional Loss - HMG20A ENSG00000140382 CDS Human protein_coding chr15:77770711 chr15:77770713 synonymous SNV . 0 23 hm5C_associated_SNPs_75920 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:77770707-77770732
64251 chr2 67632359 67632359 1 + A T UCEC 67632355 + 67632335 67632375 41 ACTGGAAGTATGTCTGATACCAAAATTACACAGGGTGTGGA ACTGGAAGTATGTCTGATACCAAATTTACACAGGGTGTGGA < 41bp 0.728729009853939 0.426722281684946 0.10987303 0.088781476 prediction 0.457458019707877 Functional Loss - ETAA1 ENSG00000143971 CDS Human protein_coding chr2:67632355 chr2:67632359 nonsynonymous SNV 0.485 0 25 hm5C_associated_SNPs_75927 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr2:67632342-67632366
64251 chr19 17534839 17534839 1 + T C SKCM 17534838 + 17534818 17534858 41 TGGATGGGGTTCCCTTCACACTCCACCCACGATTTGAGGGC TGGATGGGGTTCCCTTCACACCCCACCCACGATTTGAGGGC < 41bp 0.828312514877701 0.599588017165284 0.89443505 0.03888595 prediction 0.457448995424833 Functional Loss - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17534838 chr19:17534839 nonsynonymous SNV 0.984 4 22 hm5C_associated_SNPs_75930 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17534826-17534853
64251 chr14 68036693 68036693 1 + G A CESC 68036690 + 68036670 68036710 41 TCTTTCTCTGGCCTGGTCTACAAGAATGTCACTGTGCCTGT TCTTTCTCTGGCCTGGTCTACAAAAATGTCACTGTGCCTGT < 41bp 0.758783974765912 0.530060619641116 0.7857102 0.19012949 prediction 0.457446710249592 Functional Loss - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68036690 chr14:68036693 synonymous SNV . 0 24 hm5C_associated_SNPs_75931 0 0 5 FUS POSTAR2 GSE40653,GSM998875 chr14:68036680-68036700
64251 chr3 49050759 49050759 1 + G A LGG 49050756 + 49050736 49050776 41 CCTACTACCAGCTGTTTGTACGAGACGGCCAGCTCCAGCCA CCTACTACCAGCTGTTTGTACGAAACGGCCAGCTCCAGCCA < 41bp 0.757867106436728 0.529147544535796 0.43005708 0.08393261 prediction 0.457439123801864 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050756 chr3:49050759 nonsynonymous SNV 0.508 0 24 hm5C_associated_SNPs_75935 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:49050639-49051052
64251 chr19 50905725 50905725 1 + C T rs76131127 50905723 + 50905703 50905743 41 CCCTCCAGGTTCATGGTGGACACGGACATCGTCGGCTGCAA CCCTCCAGGTTCATGGTGGACATGGACATCGTCGGCTGCAA < 41bp 0.801837013943032 0.573122041148808 0.3847888 0.5111069 prediction 0.457429945588448 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905723 chr19:50905725 nonsynonymous SNV 0.270 0 23 hm5C_associated_SNPs_75939 2 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:50905715-50905742
64251 chr7 23224757 23224757 1 + T C LUAD 23224756 + 23224736 23224776 41 GTCATCCAGCCATCCAGTTTCTCCAAATCCACACCATGGGG GTCATCCAGCCATCCAGTTTCCCCAAATCCACACCATGGGG < 41bp 0.786012052651991 0.557297611177901 0.96649086 0.09211692 prediction 0.457428882948181 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23224756 chr7:23224757 nonsynonymous SNV 0.989 0 22 hm5C_associated_SNPs_75943 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:23224740-23224760
64251 chr6 43608145 43608145 1 + G A BLCA 43608142 + 43608122 43608162 41 TTCGACCCAAGCTCAACTATCGAGTGCCCAGCCGGGGCCAT TTCGACCCAAGCTCAACTATCGAATGCCCAGCCGGGGCCAT < 41bp 0.755430557434035 0.526727349452411 0.8928404 0.7173182 prediction 0.457406415963248 Functional Loss - MAD2L1BP ENSG00000124688 CDS Human protein_coding chr6:43608142 chr6:43608145 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_75949 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr6:43608120-43608152
64251 chr18 47110036 47110036 1 + G A HNSC 47110033 + 47110013 47110053 41 CTGGGAGGGGGCCTCTCAGTCTTGGTACAACCTGTGGAAGG CTGGGAGGGGGCCTCTCAGTCTTAGTACAACCTGTGGAAGG < 41bp 0.728698816688471 0.48313146882061 0.30555528 0.11496252 prediction 0.457397633376943 Functional Loss - LIPG ENSG00000101670 CDS Human protein_coding chr18:47110033 chr18:47110036 stopgain 0.621 1 24 hm5C_associated_SNPs_75951 0 0 1 SND1 POSTAR2 ENCODE chr18:47109984-47110124
64251 chr7 141478734 141478734 1 + C T UCEC 141478732 + 141478712 141478752 41 TTCACCACTTGCCTGTACATCACGCTTAGCCAGGCATCACC TTCACCACTTGCCTGTACATCATGCTTAGCCAGGCATCACC < 41bp 0.743829063924865 0.515133512948984 0.070611864 0.052570105 prediction 0.457391101951762 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478732 chr7:141478734 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_75953 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:141478660-141478740
64251 chr16 1549266 1549266 1 + G A UCEC 1549263 + 1549243 1549283 41 TTTCGAGACTGCTGGGGAACCTGGTGGTGAAGAACAAGAAG TTTCGAGACTGCTGGGGAACCTGATGGTGAAGAACAAGAAG < 41bp 0.760659341330569 0.53196390286568 0.51463777 0.34669745 prediction 0.457390876929777 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1549263 chr16:1549266 nonsynonymous SNV 0.715 5 24 hm5C_associated_SNPs_75954 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:1549245-1549281
64251 chr9 131670604 131670604 1 + C T SKCM 131670601 + 131670581 131670621 41 GACCAATACGACCCGCTCTACTCCAAGCGCTTCGCCGTCTT GACCAATACGACCCGCTCTACTCTAAGCGCTTCGCCGTCTT < 41bp 0.728693525627487 0.494202825204141 0.9681528 0.9495864 prediction 0.457387051254973 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131670601 chr9:131670604 synonymous SNV . 0 24 hm5C_associated_SNPs_75958 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:131670568-131670624
64251 chr2 27306318 27306318 1 + G A LUAD 27306315 + 27306295 27306335 41 GGGGCCCAAGCCGTGGGCCCCTGGACGGCTTCAGCGTGTTT GGGGCCCAAGCCGTGGGCCCCTGAACGGCTTCAGCGTGTTT < 41bp 0.780342012115135 0.551653413848122 0.45265263 0.26501068 prediction 0.457377196534026 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27306315 chr2:27306318 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_75960 0 0 1 GRSF1 POSTAR2 ENCODE chr2:27306280-27306337
64251 chr15 41555047 41555047 1 + C T SKCM 41555045 + 41555025 41555065 41 AGAGCAAAGATGTGAATGGACCCGAACCACTCAACAGCCGA AGAGCAAAGATGTGAATGGACCTGAACCACTCAACAGCCGA < 41bp 0.728687398107316 0.437008751071334 0.051161915 0.0678395 prediction 0.457374796214632 Functional Loss - CHP1 ENSG00000187446 CDS Human protein_coding chr15:41555045 chr15:41555047 synonymous SNV . 0 23 hm5C_associated_SNPs_75962 0 0 1 GRWD1 POSTAR2 ENCODE chr15:41554998-41555080
64251 chr2 70488475 70488475 1 + C T SKCM 70488472 + 70488452 70488492 41 GGCGCTATGGATTTCAATCCCTCCGTATGCACATGTGGGTA GGCGCTATGGATTTCAATCCCTCTGTATGCACATGTGGGTA < 41bp 0.731422348961396 0.502743454812691 0.040281683 0.02189523 prediction 0.457357788297411 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70488472 chr2:70488475 nonsynonymous SNV 0.872 4 24 hm5C_associated_SNPs_75964 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:70488455-70488476
64251 chrX 154004501 154004501 1 + C T CESC 154004499 + 154004479 154004519 41 GAGTGAAAGTGACGAGACTCCTCCAGCAGCTCCTCAGTTGA GAGTGAAAGTGACGAGACTCCTTCAGCAGCTCCTCAGTTGA < 41bp 0.865464479519631 0.636788262610833 0.9466933 0.029080182 prediction 0.457352433817596 Functional Loss - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154004499 chrX:154004501 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_75967 0 0 28 TARDBP POSTAR2 DRA001158,DRS012387 chrX:154004461-154004524
64251 chr17 1628566 1628566 1 + G A rs572880682 1628563 + 1628543 1628583 41 GGCTGCCTGCCGGCTGGACGCGCGTGGAGGTGCATGGGCTG GGCTGCCTGCCGGCTGGACGCGCATGGAGGTGCATGGGCTG < 41bp 0.768244143934974 0.539570670194455 0.6184773 0.48966372 prediction 0.457346947481037 Functional Loss - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1628563 chr17:1628566 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_75969 0 0 2 EIF3H POSTAR2 ENCODE chr17:1628536-1628572
64251 chr2 74329138 74329138 1 + G A BLCA 74329135 + 74329115 74329155 41 CAGCAGGAGGCCAAGCTCTACGGGAAGAAGCGCAAGTGGGG CAGCAGGAGGCCAAGCTCTACGGAAAGAAGCGCAAGTGGGG < 41bp 0.748795447328449 0.520145671682076 0.46707064 0.29778448 prediction 0.457299551292747 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74329135 chr2:74329138 synonymous SNV . 0 24 hm5C_associated_SNPs_75981 0 0 1 EIF3H POSTAR2 ENCODE chr2:74329098-74329151
64251 chr6 35391746 35391746 1 + G T LUAD 35391743 + 35391723 35391763 41 CTATCCGTTTTGGTCGGATGCCGGAGGCTGAGAAGAGGAAG CTATCCGTTTTGGTCGGATGCCGTAGGCTGAGAAGAGGAAG < 41bp 0.728637419040574 0.333271502351738 0.8646779 0.2997532 prediction 0.457274838081147 Functional Loss - PPARD ENSG00000112033 CDS Human protein_coding chr6:35391743 chr6:35391746 stopgain 0.976 1 24 hm5C_associated_SNPs_75986 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:35391746-35391747
64251 chr4 115544185 115544185 1 + A C SARC 115544184 + 115544164 115544204 41 CAGCCTTGCACGAGAGAGGCCACCATACAGTGTTCCTCCTC CAGCCTTGCACGAGAGAGGCCCCCATACAGTGTTCCTCCTC < 41bp 0.797903610104875 0.569269664105645 0.16541651 0.15095201 prediction 0.457267891998459 Functional Loss - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544184 chr4:115544185 nonsynonymous SNV 0.914 4 22 hm5C_associated_SNPs_75987 0 0 1 RBM15 POSTAR2 ENCODE chr4:115544161-115544193
64251 chr8 136561083 136561083 1 + T C STAD 136561082 + 136561062 136561102 41 CATTGAAGTGTTTGCCCCACCTGCAGAAGCTTATGCCAGGA CATTGAAGTGTTTGCCCCACCCGCAGAAGCTTATGCCAGGA < 41bp 0.82389985618025 0.595269746140943 0.15049887 0.08151454 prediction 0.457260220078614 Functional Loss - KHDRBS3 ENSG00000131773 CDS Human protein_coding chr8:136561082 chr8:136561083 synonymous SNV . 0 22 hm5C_associated_SNPs_75990 0 0 1 GRWD1 POSTAR2 ENCODE chr8:136560994-136561145
64251 chr17 27075363 27075363 1 + G T STAD 27075361 + 27075341 27075381 41 TGATGCGGCGGCTGCTGGCCCAGCATGCCACCTCTGAGTGC TGATGCGGCGGCTGCTGGCCCATCATGCCACCTCTGAGTGC < 41bp 0.899298125100941 0.670680859767454 0.14728516 0.28180942 prediction 0.457234530666975 Functional Loss - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075361 chr17:27075363 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_75999 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:27075358-27075375
64251 chr2 135922214 135922214 1 + G A BLCA 135922211 + 135922191 135922231 41 TGAAGTGTTAGTCACCGGTGCAGGAAGAGGACATGCTGGCA TGAAGTGTTAGTCACCGGTGCAGAAAGAGGACATGCTGGCA < 41bp 0.768041958104599 0.539428047135897 0.7229712 0.17471895 prediction 0.457227821937403 Functional Loss - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135922211 chr2:135922214 nonsynonymous SNV 0.968 3 24 hm5C_associated_SNPs_76000 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:135922183-135922214
64251 chr15 22928193 22928193 1 + G A LUSC 22928190 + 22928170 22928210 41 GTACACCTGGAGGAGCTGCTCCCGGGCCATCCCACAGGTGC GTACACCTGGAGGAGCTGCTCCCAGGCCATCCCACAGGTGC < 41bp 0.728610653276418 0.482668246145113 0.33290386 0.078680515 prediction 0.457221306552836 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22928190 chr15:22928193 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_76001 0 0 4 DDX24 POSTAR2 ENCODE chr15:22928134-22928207
64251 chr2 239234538 239234538 1 + G A STAD 239234535 + 239234515 239234555 41 GCCACTGTTGGCCAAACCAGCCCGAATCGTGGCGGGGCATG GCCACTGTTGGCCAAACCAGCCCAAATCGTGGCGGGGCATG < 41bp 0.728605384845797 0.483650659811481 0.27200526 0.14165571 prediction 0.457210769691593 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239234535 chr2:239234538 nonsynonymous SNV 0.590 4 24 hm5C_associated_SNPs_76004 0 0 2 EFTUD2 POSTAR2 ENCODE chr2:239234523-239234579
64251 chr18 77170535 77170535 1 + C T CESC 77170533 + 77170513 77170553 41 ATCCCGCCGGCGGATCACCCCTCGGGGTACGGAGCAGCTTT ATCCCGCCGGCGGATCACCCCTTGGGGTACGGAGCAGCTTT < 41bp 0.789106966494606 0.560502920790935 0.40142307 0.12790811 prediction 0.457208091407341 Functional Loss - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77170533 chr18:77170535 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_76005 0 0 1 DROSHA POSTAR2 ENCODE chr18:77170521-77170646
64251 chr8 118543009 118543009 1 + G T LUSC 118543007 + 118542987 118543027 41 ATGGCTCAAAGAATGATGATCGGGCTGGCCCACCTCGTTTT ATGGCTCAAAGAATGATGATCGTGCTGGCCCACCTCGTTTT < 41bp 0.728603883853846 0.380429252442764 0.55844104 0.06389892 prediction 0.457207767707692 Functional Loss - MED30 ENSG00000164758 CDS Human protein_coding chr8:118543007 chr8:118543009 synonymous SNV . 0 23 hm5C_associated_SNPs_76007 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:118542993-118543019
64251 chr17 78081619 78081619 1 + G A UCEC 78081616 + 78081596 78081636 41 CAGCCCGGTGCGAACCTCTACGGGTCTCACCCTTTCTACCT CAGCCCGGTGCGAACCTCTACGGATCTCACCCTTTCTACCT < 41bp 0.787223436114129 0.558621269073742 0.2682339 0.122764945 prediction 0.457204334080774 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78081616 chr17:78081619 synonymous SNV . 0 24 hm5C_associated_SNPs_76008 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78081582-78081620
64251 chr15 89169799 89169799 1 + C T UCEC 89169797 + 89169777 89169817 41 ATCGACTGTGAGATGGTGGGCACGGGACCCCGAGGGCGGGT ATCGACTGTGAGATGGTGGGCATGGGACCCCGAGGGCGGGT < 41bp 0.728595601736241 0.473871667564126 0.73171544 0.6602777 prediction 0.457191203472482 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169797 chr15:89169799 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_76012 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr15:89169763-89169808
64251 chr1 48705037 48705037 1 + T C CESC 48705036 + 48705016 48705056 41 TTGGCCTGGGAGTGGGGCTTCTGCGTATGATCCTGGAGTTC TTGGCCTGGGAGTGGGGCTTCCGCGTATGATCCTGGAGTTC < 41bp 0.762423516646143 0.533828012266327 0.30363122 0.46304387 prediction 0.457191008759633 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48705036 chr1:48705037 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_76013 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:48705017-48705040
64251 chr19 50920507 50920507 1 + G A BLCA 50920504 + 50920484 50920524 41 AGCGCTGCCAGGGCAGCCTGCACGAGGACGTCATCTGCACC AGCGCTGCCAGGGCAGCCTGCACAAGGACGTCATCTGCACC < 41bp 0.775181121895414 0.546592196197331 0.4514175 0.1110166 prediction 0.457177851396164 Functional Loss - POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50920504 chr19:50920507 nonsynonymous SNV 0.846 1 24 hm5C_associated_SNPs_76015 0 0 1 DDX24 POSTAR2 ENCODE chr19:50920501-50920527
64251 chr4 1388306 1388306 1 + G A BLCA 1388303 + 1388283 1388323 41 GTGTCCCTGCACCTCTTATGCATGAGCCCTCGCTTTGTGCC GTGTCCCTGCACCTCTTATGCATAAGCCCTCGCTTTGTGCC < 41bp 0.77604270035401 0.547469183974493 0.16525418 0.05213681 prediction 0.457147032759033 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388303 chr4:1388306 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_76018 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831631 chr4:1388300-1388320
64251 chr4 95204388 95204388 1 + A T LUSC 95204384 + 95204364 95204404 41 CAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCT CAGCAAATGTTGTTATACTTCACGTTATTGACTGTAATCCT < 41bp 0.728572979230018 0.398566833715088 0.029635996 0.052220374 prediction 0.457145958460036 Functional Loss - SMARCAD1 ENSG00000163104 CDS Human protein_coding chr4:95204384 chr4:95204388 nonsynonymous SNV 0.993 5 25 hm5C_associated_SNPs_76019 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:95204370-95204400
64251 chr19 33698321 33698321 1 + G A SKCM 33698318 + 33698298 33698338 41 CCCAGCTCCTGCAGATGCACCTCGGGAGCCCTGCTCAGCCC CCCAGCTCCTGCAGATGCACCTCAGGAGCCCTGCTCAGCCC < 41bp 0.788447985000787 0.559878757498326 0.40738416 0.12308347 prediction 0.457138455004922 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33698318 chr19:33698321 nonsynonymous SNV 0.154 1 24 hm5C_associated_SNPs_76021 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:33698314-33698378
64251 chr7 55240808 55240808 1 + G T UCEC 55240806 + 55240786 55240826 41 GCACGCTGCGGAGGCTGCTGCAGGAGAGGGAGGTGAGTGCC GCACGCTGCGGAGGCTGCTGCATGAGAGGGAGGTGAGTGCC < 41bp 0.898854710307431 0.670289697460803 0.91433626 0.8259419 prediction 0.457130025693256 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55240806 chr7:55240808 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_76024 0 0 1 SND1 POSTAR2 ENCODE chr7:55240684-55240818
64251 chr1 226026412 226026412 1 + C T rs373688139 226026410 + 226026390 226026430 41 CAGCTGCCCGCAGGCCATACCCCGAAGCCCTTGCTGATGGT CAGCTGCCCGCAGGCCATACCCTGAAGCCCTTGCTGATGGT < 41bp 0.728562384219361 0.436501254827305 0.07041067 0.08616719 prediction 0.457124768438722 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026410 chr1:226026412 nonsynonymous SNV 0.112 0 23 hm5C_associated_SNPs_76026 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:226026411-226026445
64251 chr2 3623248 3623248 1 + G A LGG 3623245 + 3623225 3623265 41 TGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGC TGAAGCCCAATGGCGAGAAGCCGAACGAGTTCGAGTCCGGC < 41bp 0.736801771230586 0.508239455494605 0.65803087 0.71330625 prediction 0.457124631471961 Functional Loss - RPS7 ENSG00000171863 CDS Human protein_coding chr2:3623245 chr2:3623248 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_76027 0 0 8 DDX3X POSTAR2 ENCODE chr2:3623245-3623265
64251 chr18 77067143 77067143 1 + G A rs34750827 77067140 + 77067120 77067160 41 CGTGACCCCCGTGTATGAGTCTCGGGCCGGCGTTACTGAGG CGTGACCCCCGTGTATGAGTCTCAGGCCGGCGTTACTGAGG < 41bp 0.761882181755829 0.533328088535034 0.17098677 0.09821704 prediction 0.45710818644159 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77067140 chr18:77067143 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_76034 0 0 1 EIF3H POSTAR2 ENCODE chr18:77067059-77067228
64251 chr14 24619512 24619512 1 + G A UCEC 24619509 + 24619489 24619529 41 AGGCCTAGAACCTGATCTTGCACGGGGTCGGTGGGCCTGCC AGGCCTAGAACCTGATCTTGCACAGGGTCGGTGGGCCTGCC < 41bp 0.786580387630306 0.558031603868719 0.8998137 0.29187876 prediction 0.457097567523174 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619509 chr14:24619512 nonsynonymous SNV 0.939 3 24 hm5C_associated_SNPs_76037 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24619475-24619533
64251 chr11 44095008 44095008 1 + C T ESCA 44095006 + 44094986 44095026 41 TCTGTCCCCAGCTGAGTCAGCGCGACATGCAGAGGGTGGAG TCTGTCCCCAGCTGAGTCAGCGTGACATGCAGAGGGTGGAG < 41bp 0.830012537984638 0.6014714194756 0.48039952 0.47279114 prediction 0.457082237018076 Functional Loss - ACCS ENSG00000110455 CDS Human protein_coding chr11:44095006 chr11:44095008 synonymous SNV . 0 23 hm5C_associated_SNPs_76038 0 0 2 BUD13 POSTAR2 ENCODE chr11:44094992-44095031
64251 chr2 114647551 114647551 1 + G C rs1504044 114647547 + 114647527 114647567 41 ACCGGCGGCCATCTTGGCTTCCCGGGGAAAGGCGGCGTGAG ACCGGCGGCCATCTTGGCTTCCCGCGGAAAGGCGGCGTGAG < 41bp 0.825450442638123 0.596913299622866 0.811533 0.28079128 prediction 0.457074286030513 Functional Loss - LOC101060091 ENSG00000115091 UTR5 Human protein_coding chr2:114647547 chr2:114647551 . . 0 25 hm5C_associated_SNPs_76041 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:114647531-114647563
64251 chr19 39395718 39395718 1 + G A CESC 39395715 + 39395695 39395735 41 CTGGATTTTCTTCTAGGCTTCTCGGCCGGCACTGAGTACAT CTGGATTTTCTTCTAGGCTTCTCAGCCGGCACTGAGTACAT < 41bp 0.759276158190116 0.530744530501326 0.1974369 0.19507074 prediction 0.45706325537758 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395715 chr19:39395718 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_76045 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39395677-39395739
64251 chr8 38854597 38854597 1 + G A STAD 38854594 + 38854574 38854614 41 TCGGCCGAGATGGGGTCTGGCGCGCGCTTTCCCTCGGGGAC TCGGCCGAGATGGGGTCTGGCGCACGCTTTCCCTCGGGGAC < 41bp 0.774218370171528 0.545701296056795 0.27569124 0.18126294 prediction 0.457034148229466 Functional Loss - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38854594 chr8:38854597 synonymous SNV . 0 24 hm5C_associated_SNPs_76047 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:38854587-38854609
64251 chr10 17271484 17271484 1 - G A SKCM 17271486 - 17271466 17271506 41 TCCGGCTGGAGCTCGGCCGGCTCGCGGTGCCCGGGCCGCCG TCCGGCTGGAGCTCGGCCGGCTTGCGGTGCCCGGGCCGCCG < 41bp 0.773902288477323 0.545386500268855 0.81429034 0.8313834 prediction 0.457031576416936 Functional Loss - VIM ENSG00000026025 CDS Human protein_coding chr10:17271486 chr10:17271484 synonymous SNV . 0 23 hm5C_associated_SNPs_76048 0 0 1 EWSR1 POSTAR2 ENCODE chr10:17271476-17271502
64251 chr5 176860194 176860194 1 + G A UCEC 176860191 + 176860171 176860211 41 TGGCCCCTTTTGCCGACTACCTCGACAGCATCTACTTCAAC TGGCCCCTTTTGCCGACTACCTCAACAGCATCTACTTCAAC < 41bp 0.769296440478796 0.540781939531567 0.23311737 0.22190335 prediction 0.457029001894458 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176860191 chr5:176860194 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76049 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:176860183-176860195
64251 chr12 56536179 56536179 1 + G T GBM 56536177 + 56536157 56536197 41 GGTTTACACTCAGCAGTGGTCAGGGGCAGGTGCTACTGAGA GGTTTACACTCAGCAGTGGTCATGGGCAGGTGCTACTGAGA < 41bp 0.728512293793011 0.408304968183021 0.926316 0.74043965 prediction 0.457024587586022 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536177 chr12:56536179 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_76051 0 0 3 DDX24 POSTAR2 ENCODE chr12:56536167-56536191
64251 chr10 124008212 124008212 1 + T C GBM 124008211 + 124008191 124008231 41 AGACGGTGCAGCAGCTGGTTCTGGAGAAGGAGCAAGCCCTG AGACGGTGCAGCAGCTGGTTCCGGAGAAGGAGCAAGCCCTG < 41bp 0.728509559856581 0.488768985275897 0.7189591 0.9056138 prediction 0.457019119713162 Functional Loss - TACC2 ENSG00000138162 CDS Human protein_coding chr10:124008211 chr10:124008212 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_76053 0 0 2 GRWD1 POSTAR2 ENCODE chr10:124008155-124008241
64251 chr1 2237625 2237625 1 + G A UCEC 2237622 + 2237602 2237642 41 GAAGCGGGAGCTGGAGCAGGCGCGGCAGGCCCGGGTGTGCG GAAGCGGGAGCTGGAGCAGGCGCAGCAGGCCCGGGTGTGCG < 41bp 0.76722386609168 0.5387234587208 0.7036832 0.5059147 prediction 0.45700081474176 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2237622 chr1:2237625 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_76057 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2237574-2237643
64251 chr7 66104098 66104098 1 + C T ESCA 66104096 + 66104076 66104116 41 GACCTGCTGCACTGCCTGGTCACGGACCTCTCGGCCCAGGG GACCTGCTGCACTGCCTGGTCATGGACCTCTCGGCCCAGGG < 41bp 0.813997059214512 0.58549730070766 0.33160383 0.0949412 prediction 0.456999517013705 Functional Loss - KCTD7 ENSG00000243335 CDS Human protein_coding chr7:66104096 chr7:66104098 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_76058 1 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:66104081-66104108
64251 chr10 86185535 86185535 1 + G C UCEC 86185534 + 86185514 86185554 41 ACCGACCAGACAGAAATGTTCGGCAGCCTCAGGAAGGTTTT ACCGACCAGACAGAAATGTTCCGCAGCCTCAGGAAGGTTTT < 41bp 0.728494490208681 0.415564453710967 0.8861074 0.23513013 prediction 0.456988980417362 Functional Loss - CCSER2 ENSG00000107771 CDS Human protein_coding chr10:86185534 chr10:86185535 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_76061 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr10:86185531-86185556
64251 chr8 42183529 42183529 1 + G A rs78448523 42183526 + 42183506 42183546 41 GTCAGTGGAAGCCCGGATAGCATGAATGCCTCTCGACTTAG GTCAGTGGAAGCCCGGATAGCATAAATGCCTCTCGACTTAG < 41bp 0.758004897659177 0.529514196186372 0.12605828 0.067032576 prediction 0.45698140294561 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42183526 chr8:42183529 nonsynonymous SNV 0.493 1 24 hm5C_associated_SNPs_76064 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:42183514-42183536
64251 chr6 26598757 26598757 1 + C T STAD 26598755 + 26598735 26598775 41 GCCAGGGGGACGTGAACGGGCTCGCCTGGCAACTGCCCAGG GCCAGGGGGACGTGAACGGGCTTGCCTGGCAACTGCCCAGG < 41bp 0.812860094195047 0.584379708826549 0.13542795 0.17693067 prediction 0.456960770736996 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598755 chr6:26598757 nonsynonymous SNV 0.145 3 23 hm5C_associated_SNPs_76072 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr11 47602520 47602520 1 + G A UCEC 47602517 + 47602497 47602537 41 GACAGCAGTGGACGTCCCAACTCGGCAAAACCGTTTTGAGG GACAGCAGTGGACGTCCCAACTCAGCAAAACCGTTTTGAGG < 41bp 0.72846446371936 0.490445344285908 0.087176114 0.07510269 prediction 0.45692892743872 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47602517 chr11:47602520 nonsynonymous SNV 0.980 5 24 hm5C_associated_SNPs_76075 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:47602487-47602522
64251 chrX 2638406 2638406 1 + G A UCEC 2638403 + 2638383 2638423 41 TCTTTCACAAACAGACGACCCACGACCACCGAACCCACCCA TCTTTCACAAACAGACGACCCACAACCACCGAACCCACCCA < 41bp 0.752451278845787 0.523999808728787 0.03604701 0.011820644 prediction 0.456902940234001 Functional Loss - CD99 ENSG00000002586 CDS Human protein_coding chrX:2638403 chrX:2638406 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_76082 0 0 1 TBRG4 POSTAR2 ENCODE chrX:2638395-2638435
64251 chr15 38776519 38776519 1 + G A CESC 38776516 + 38776496 38776536 41 ATGAAATTGAACCACCACCTCCAGAAATGCCCCCTTGGCAA ATGAAATTGAACCACCACCTCCAAAAATGCCCCCTTGGCAA < 41bp 0.765931603596271 0.537485011149352 0.1569379 0.019195884 prediction 0.456893184893838 Functional Loss - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38776516 chr15:38776519 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_76084 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:38776487-38776521
64251 chr19 55901040 55901040 1 + G A rs116824796 55901037 + 55901017 55901057 41 TCTGCTCCAGTCTTGCCCAGCTCGAAGGAGAGCAGATCTGA TCTGCTCCAGTCTTGCCCAGCTCAAAGGAGAGCAGATCTGA < 41bp 0.752726287769164 0.524281784711381 0.2847607 0.2101509 prediction 0.456889006115567 Functional Loss - RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901037 chr19:55901040 . . 0 24 hm5C_associated_SNPs_76085 0 0 6 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:55901018-55901063
64251 chr20 39729986 39729986 1 + G A BLCA 39729983 + 39729963 39730003 41 CATCATGCTTAACCCTAGTTCACGAATCAAGGTAAGGGGAT CATCATGCTTAACCCTAGTTCACAAATCAAGGTAAGGGGAT < 41bp 0.732481060753687 0.504041825428724 0.023370892 0.016157776 prediction 0.456878470649926 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39729983 chr20:39729986 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_76086 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39729957-39729990
64251 chr19 10794630 10794630 1 + G A rs2229383 10794627 + 10794607 10794647 41 AGCTATGGGTACGGAGGCAACTCGGCGACAGCAGGCTACAG AGCTATGGGTACGGAGGCAACTCAGCGACAGCAGGCTACAG < 41bp 0.765644408532037 0.537206894099529 0.5843768 0.17050526 prediction 0.456875028865017 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10794627 chr19:10794630 synonymous SNV . 0 24 hm5C_associated_SNPs_76088 0 1 10 DGCR8 POSTAR2 GSE39086,GSM955513 chr19:10794619-10794640
64251 chr12 52056845 52056845 1 + G T LUSC 52056842 + 52056822 52056862 41 AAGGCCTGGTTGCAGTTCCCCTGGAGGACTTTGACCCATAC AAGGCCTGGTTGCAGTTCCCCTGTAGGACTTTGACCCATAC < 41bp 0.728436543327139 0.356850830066282 0.06985062 0.00530082 prediction 0.456873086654278 Functional Loss - SCN8A ENSG00000196876 CDS Human protein_coding chr12:52056842 chr12:52056845 stopgain 1.000 0 24 hm5C_associated_SNPs_76089 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:52056834-52056857
64251 chr1 46032600 46032600 1 + C T COAD 46032598 + 46032578 46032618 41 TGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCC TGTGGAACACCAAGCACCACCCTGAGGATGTGGAGCCTGCC < 41bp 0.72843184187452 0.443252291665487 0.13856113 0.056027234 prediction 0.456863683749039 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46032598 chr1:46032600 synonymous SNV . 0 23 hm5C_associated_SNPs_76092 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:46032578-46032614
64251 chr11 57564295 57564295 1 + G A UCEC 57564292 + 57564272 57564312 41 ATGTGTATGGGCCCCAACCCCAGGTTCGGGTAGGTGGGAGC ATGTGTATGGGCCCCAACCCCAGATTCGGGTAGGTGGGAGC < 41bp 0.728430553637266 0.493338356424546 0.6356877 0.551853 prediction 0.456861107274533 Functional Loss - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57564292 chr11:57564295 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_76095 0 0 20 FMR1 POSTAR2 GSE39682,GSM977616 chr11:57564280-57564300
64251 chr8 146278525 146278525 1 + G A UCEC 146278522 + 146278502 146278542 41 CTCAAGAGGCAGAAACCCACCCCGAAACAGAGTAAGGGACC CTCAAGAGGCAGAAACCCACCCCAAAACAGAGTAAGGGACC < 41bp 0.753525321604647 0.525095442064211 0.09909207 0.09745771 prediction 0.456859759080872 Functional Loss - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278522 chr8:146278525 synonymous SNV . 0 24 hm5C_associated_SNPs_76096 0 0 2 GEMIN5 POSTAR2 ENCODE chr8:146278478-146278527
64251 chr7 40234623 40234623 1 + G C HNSC 40234622 + 40234602 40234642 41 CTGGGATATGAAGATATAGACGAGATTGCTCCTCACATCAT CTGGGATATGAAGATATAGACCAGATTGCTCCTCACATCAT < 41bp 0.728426992847177 0.469485013584963 0.39043167 0.11241317 prediction 0.456853985694354 Functional Loss - SUGCT ENSG00000175600 CDS Human protein_coding chr7:40234622 chr7:40234623 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_76097 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:40234594-40234635
64251 chr5 76028487 76028487 1 + C T HNSC 76028485 + 76028465 76028505 41 GTGTACATGCTGCACCTGGCCACGGCAGATGTGCTGTTTGT GTGTACATGCTGCACCTGGCCATGGCAGATGTGCTGTTTGT < 41bp 0.728416794275218 0.475835561655391 0.21232745 0.19079813 prediction 0.456833588550436 Functional Loss - F2R ENSG00000181104 CDS Human protein_coding chr5:76028485 chr5:76028487 nonsynonymous SNV 0.226 0 23 hm5C_associated_SNPs_76101 0 0 1 RBM15 POSTAR2 ENCODE chr5:76028417-76028511
64251 chr12 7272113 7272113 1 + A T UCEC 7272109 + 7272089 7272129 41 CCCCCAGATGGTTTACCTGCCTGGACAGCAAGATGATGGCT CCCCCAGATGGTTTACCTGCCTGGTCAGCAAGATGATGGCT < 41bp 0.728411249080701 0.429379808668338 0.18207914 0.1391311 prediction 0.456822498161401 Functional Loss - C1RL-AS1 ENSG00000205885 ncRNA_exonic Human antisense chr12:7272109 chr12:7272113 . . 0 25 hm5C_associated_SNPs_76105 0 0 1 PPIG POSTAR2 ENCODE chr12:7272095-7272151
64251 chr1 167653175 167653175 1 + G A rs112577989 167653172 + 167653152 167653192 41 ACCAATGCCAATGTGGACAACTCGGCGTCCCCCTCGGTGGC ACCAATGCCAATGTGGACAACTCAGCGTCCCCCTCGGTGGC < 41bp 0.794083692193684 0.565673186729269 0.28615877 0.113936245 prediction 0.456821010928829 Functional Loss - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167653172 chr1:167653175 synonymous SNV . 0 24 hm5C_associated_SNPs_76106 0 0 2 DDX3X POSTAR2 ENCODE chr1:167653133-167653239
64251 chr10 7762845 7762845 1 + G T CESC 7762843 + 7762823 7762863 41 ATGTGTGGGTTATCGAACCACAGGGACTGAGATTTCTTCAT ATGTGTGGGTTATCGAACCACATGGACTGAGATTTCTTCAT < 41bp 0.728408889775883 0.377871755607008 0.9037776 0.33030075 prediction 0.456817779551767 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7762843 chr10:7762845 nonsynonymous SNV 0.211 3 23 hm5C_associated_SNPs_76108 0 0 2 SND1 POSTAR2 ENCODE chr10:7762842-7762847
64251 chr17 79987488 79987488 1 + A C rs547906951 79987487 + 79987467 79987507 41 GAGGAGGAGCTGATCAAGGCCAAGAGCCAGGCCCGCCTGGA GAGGAGGAGCTGATCAAGGCCCAGAGCCAGGCCCGCCTGGA < 41bp 0.803789749533766 0.575388552176231 0.78140473 0.72037154 prediction 0.456802394715069 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79987487 chr17:79987488 nonsynonymous SNV 0.931 2 22 hm5C_associated_SNPs_76111 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:79987471-79987505
64251 chr17 7480000 7480000 1 + G A rs61730297 7479997 + 7479977 7480017 41 CGTGTGTTTGATATGCTTAACCGGAGATACCTGTGTGAGTA CGTGTGTTTGATATGCTTAACCGAAGATACCTGTGTGAGTA < 41bp 0.728398251978233 0.482366593339098 0.8676814 0.41040093 prediction 0.456796503956466 Functional Loss - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479997 chr17:7480000 synonymous SNV . 0 24 hm5C_associated_SNPs_76113 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:7479863-7480009
64251 chr19 49510383 49510383 1 + G C KIRC 49510379 + 49510359 49510399 41 AGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGC AGGCGCTGACGCAGGCCTTCCGGCCGTCCATCGGCGTTCGC < 41bp 0.856901077559642 0.628505321484808 0.4508599 0.13795185 prediction 0.456791512149668 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49510379 chr19:49510383 nonsynonymous SNV 0.234 1 25 hm5C_associated_SNPs_76114 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:49510370-49510390
64251 chr2 11718519 11718519 1 + G A UCEC 11718516 + 11718496 11718536 41 CTTCCCCAGCGAGCCCGTTCCTGGGACGAACCCCAGCATCC CTTCCCCAGCGAGCCCGTTCCTGAGACGAACCCCAGCATCC < 41bp 0.78734178245035 0.558946714014454 0.89842355 0.41422006 prediction 0.456790136871793 Functional Loss - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11718516 chr2:11718519 nonsynonymous SNV 0.003 2 24 hm5C_associated_SNPs_76115 0 0 2 PPIG POSTAR2 ENCODE chr2:11718488-11718557
64251 chr3 9970273 9970273 1 + G A COAD 9970270 + 9970250 9970290 41 CTCTCTTTCCACAGAAGGTTCTCGAGTTCCCATTGCTGAAA CTCTCTTTCCACAGAAGGTTCTCAAGTTCCCATTGCTGAAA < 41bp 0.737856403638417 0.509469516350182 0.1981073 0.09192893 prediction 0.45677377457647 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9970270 chr3:9970273 nonsynonymous SNV 0.010 0 24 hm5C_associated_SNPs_76119 0 0 2 PPIG POSTAR2 ENCODE chr3:9970270-9970311
64251 chr14 68113451 68113451 1 + G T OV 68113449 + 68113429 68113469 41 TCTGAGAGACGTGGACCCTCCTGAACAGTAAGTTGATGCAT TCTGAGAGACGTGGACCCTCCTTAACAGTAAGTTGATGCAT < 41bp 0.728375766200675 0.395851098860922 0.17470187 0.054819763 prediction 0.45675153240135 Functional Loss - ARG2 ENSG00000081181 CDS Human protein_coding chr14:68113449 chr14:68113451 stopgain 0.999 1 23 hm5C_associated_SNPs_76131 0 0 2 PUM2 POSTAR2 ENCODE chr14:68113406-68113454
64251 chr12 6946231 6946231 1 + C T COAD 6946229 + 6946209 6946249 41 CATGAACGCTTCGAGGGGCTCACGGTGCTTAAGGCTGCGCA CATGAACGCTTCGAGGGGCTCATGGTGCTTAAGGCTGCGCA < 41bp 0.811901712853525 0.583525960688962 0.78103715 0.30176678 prediction 0.456751504329125 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6946229 chr12:6946231 nonsynonymous SNV 0.964 3 23 hm5C_associated_SNPs_76132 0 0 1 BUD13 POSTAR2 ENCODE chr12:6946218-6946274
64251 chr19 58790459 58790459 1 + G A LUSC 58790456 + 58790436 58790476 41 GGGCGATCCAGCATGGACCCCGAGGACGAAGGGGTAGCGGG GGGCGATCCAGCATGGACCCCGAAGACGAAGGGGTAGCGGG < 41bp 0.781515425505319 0.55314031591878 0.793013 0.31673497 prediction 0.456750219173077 Functional Loss - ZNF8 ENSG00000083842;ENSG00000267216;ENSG00000273439 CDS Human other chr19:58790456 chr19:58790459 synonymous SNV . 0 24 hm5C_associated_SNPs_76134 0 0 4 DDX3X POSTAR2 ENCODE chr19:58790359-58790499
64251 chr5 109025714 109025714 1 + G T rs560653994 109025711 + 109025691 109025731 41 CCTCCCCTGGGTGAGGAGGACACGCCTGCCCTCGTCGAGAA CCTCCCCTGGGTGAGGAGGACACTCCTGCCCTCGTCGAGAA < 41bp 0.72836617935096 0.40533361678817 0.14428023 0.15462494 prediction 0.456732358701921 Functional Loss - MAN2A1 ENSG00000112893 UTR5 Human protein_coding chr5:109025711 chr5:109025714 . . 0 24 hm5C_associated_SNPs_76139 0 0 3 DDX3X POSTAR2 ENCODE chr5:109025634-109025724
64251 chr8 56879416 56879416 1 + G A SKCM 56879413 + 56879393 56879433 41 AGGCTCTACGCTGTGGTCACCAGGGAGGAGCCCATTTACAT AGGCTCTACGCTGTGGTCACCAGAGAGGAGCCCATTTACAT < 41bp 0.758944409282423 0.53058005273382 0.9085288 0.71762025 prediction 0.456728713097207 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56879413 chr8:56879416 synonymous SNV . 0 24 hm5C_associated_SNPs_76141 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:56879415-56879441
64251 chr19 11018764 11018764 1 + G T BLCA 11018762 + 11018742 11018782 41 AAACCTGCCGGGGCCACACCCTGGAGCGGTCTGTGTTCAGC AAACCTGCCGGGGCCACACCCTTGAGCGGTCTGTGTTCAGC < 41bp 0.902341303606469 0.673979171281464 0.87249374 0.1539351 prediction 0.45672426465001 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11018762 chr19:11018764 synonymous SNV . 0 23 hm5C_associated_SNPs_76143 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11018758-11018779
64251 chr1 156105054 156105054 1 + G A LUSC 156105051 + 156105031 156105071 41 CCACGAGGAGCTGCAGCAGTCGCGCATCCGCATCGACAGCC CCACGAGGAGCTGCAGCAGTCGCACATCCGCATCGACAGCC < 41bp 0.765391839346166 0.537029777281558 0.6923276 0.3555978 prediction 0.456724124129217 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156105051 chr1:156105054 nonsynonymous SNV 0.877 2 24 hm5C_associated_SNPs_76144 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:156105054-156105076
64251 chr11 46404188 46404188 1 + G A PAAD 46404185 + 46404165 46404205 41 GGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAG GGGTGCGTGTGATGGGGGCACAGACACCAAAGTCCGCCAAG < 41bp 0.760326149130695 0.531968266342847 0.8851019 0.42235506 prediction 0.456715765575695 Functional Loss - MDK ENSG00000110492 CDS Human protein_coding chr11:46404185 chr11:46404188 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_76147 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr11:46404144-46404195
64251 chr7 87505973 87505973 1 + G T rs561400295 87505970 + 87505950 87505990 41 GCGGCCGTCCTGTCAACAGGCCGGGGGAAGCCGTGCTTTCG GCGGCCGTCCTGTCAACAGGCCGTGGGAAGCCGTGCTTTCG < 41bp 0.728356737643712 0.449378867484069 0.9042156 0.40996653 prediction 0.456713475287423 Functional Loss - DBF4 ENSG00000006634 UTR5 Human protein_coding chr7:87505970 chr7:87505973 . . 0 24 hm5C_associated_SNPs_76150 0 0 1 DDX3X POSTAR2 ENCODE chr7:87505902-87506027
64251 chr1 179064563 179064563 1 + A T rs190431521 179064559 + 179064539 179064579 41 CTTTTTTTTGGAGGTCCCACCGAGATAGATAGGAACTTGGA CTTTTTTTTGGAGGTCCCACCGAGTTAGATAGGAACTTGGA < 41bp 0.728355780182452 0.425720705233106 0.6193519 0.38744694 prediction 0.456711560364903 Functional Loss - TOR3A ENSG00000186283 UTR3 Human protein_coding chr1:179064559 chr1:179064563 . . 0 25 hm5C_associated_SNPs_76152 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:179064530-179064563
64251 chr12 10373129 10373129 1 + C T UCEC 10373127 + 10373107 10373147 41 GTCAACAACACCATCCCTCCCACCAGTGCTACCATGGGCCA GTCAACAACACCATCCCTCCCATCAGTGCTACCATGGGCCA < 41bp 0.845543044669387 0.617194993045186 0.25013596 0.046534628 prediction 0.4566961032484 Functional Loss - GABARAPL1 ENSG00000139112 CDS Human protein_coding chr12:10373127 chr12:10373129 nonsynonymous SNV 0.983 2 23 hm5C_associated_SNPs_76156 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr12:10373100-10373140
64251 chr19 44740466 44740466 1 + G A LGG 44740463 + 44740443 44740483 41 GGTACATCAGAGAGTCCATACTGGAGAGAAGCCATACAAAT GGTACATCAGAGAGTCCATACTGAAGAGAAGCCATACAAAT < 41bp 0.731602097452599 0.503269142704094 0.3550214 0.20020029 prediction 0.456665909497011 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44740463 chr19:44740466 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_76161 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:44740394-44740474
64251 chr17 17968940 17968940 1 + G A rs187613009 17968937 + 17968917 17968957 41 CAGCCTTGGTGCTCAGTGGTCCCGAGGCCCTAGACCCCCAC CAGCCTTGGTGCTCAGTGGTCCCAAGGCCCTAGACCCCCAC < 41bp 0.768110222452441 0.539787704461418 0.85085773 0.5215546 prediction 0.456645035982046 Functional Loss - GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17968937 chr17:17968940 . . 0 24 hm5C_associated_SNPs_76164 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr17:17968909-17968967
64251 chr1 53675834 53675834 1 + T C STAD 53675833 + 53675813 53675853 41 CTGTTTCTGCCATCCGGTTTCTGAAGACACTCCGGGCTGGC CTGTTTCTGCCATCCGGTTTCCGAAGACACTCCGGGCTGGC < 41bp 0.787837140151368 0.559520639404512 0.18979323 0.6505828 prediction 0.456633001493713 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53675833 chr1:53675834 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_76167 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:53675815-53675836
64251 chr22 18570802 18570802 1 + T C UCEC 18570801 + 18570781 18570821 41 CTTCCGCTGGATCCGGAAGGCTGCATTTTCTCGCCTCTACC CTTCCGCTGGATCCGGAAGGCCGCATTTTCTCGCCTCTACC < 41bp 0.778353490571635 0.550038019782096 0.16293594 0.15173033 prediction 0.456630941579076 Functional Loss - PEX26 ENSG00000215193 CDS Human protein_coding chr22:18570801 chr22:18570802 synonymous SNV . 0 22 hm5C_associated_SNPs_76169 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:18570769-18570803
64251 chr22 21133909 21133909 1 + G A BLCA 21133906 + 21133886 21133926 41 GTCGACAGTCTGTCAGTTTCCCCGACAGACTCTGATGTGAG GTCGACAGTCTGTCAGTTTCCCCAACAGACTCTGATGTGAG < 41bp 0.728313594012132 0.48900743054983 0.08262119 0.06890553 prediction 0.456627188024264 Functional Loss - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21133906 chr22:21133909 synonymous SNV . 0 24 hm5C_associated_SNPs_76170 0 0 4 RPS3 POSTAR2 ENCODE chr22:21133883-21133920
64251 chr19 57955623 57955623 1 + C T UCEC 57955621 + 57955601 57955641 41 TGTTTATGGACAGCTTCACACTCGGTAGACATCAGAGAGTT TGTTTATGGACAGCTTCACACTTGGTAGACATCAGAGAGTT < 41bp 0.8253412690478 0.59702996063407 0.0270167 0.08418831 prediction 0.456622616827461 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955621 chr19:57955623 synonymous SNV . 0 23 hm5C_associated_SNPs_76172 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:57955603-57955625
64251 chr21 45107562 45107562 1 + T C rs9306160 45107561 + 45107541 45107581 41 GGGAGCCCGAGGCCTCTGGGCTGAAAGCCCTGAAGGCACGT GGGAGCCCGAGGCCTCTGGGCCGAAAGCCCTGAAGGCACGT < 41bp 0.746950814559722 0.518651585458894 0.2544173 0.28962642 prediction 0.456598458201657 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107561 chr21:45107562 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_76180 0 1 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr21:45107561-45107562
64251 chr22 29446701 29446701 1 + G A UCEC 29446698 + 29446678 29446718 41 GACTGTGATCTGGGCCTGCCCTCGGACTGCCAAGGGACCCA GACTGTGATCTGGGCCTGCCCTCAGACTGCCAAGGGACCCA < 41bp 0.781724860820968 0.553427355639041 0.18397018 0.19303355 prediction 0.456595010363854 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446698 chr22:29446701 synonymous SNV . 0 24 hm5C_associated_SNPs_76184 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:29446614-29446739
64251 chr17 12044531 12044531 1 + T C BRCA 12044530 + 12044510 12044550 41 CATGCTATGTTTGTAAAATCCTGGATCAAATGCCAGCTACT CATGCTATGTTTGTAAAATCCCGGATCAAATGCCAGCTACT < 41bp 0.771102229893999 0.542811898201262 0.6460912 0.5445826 prediction 0.456580663385475 Functional Loss - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12044530 chr17:12044531 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_76185 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:12044524-12044540
64251 chr16 77228363 77228363 1 + C T UCEC 77228361 + 77228341 77228381 41 ACAGATCGTGAGCACACTTACACGTGCAAGTGTCGCCCGCA ACAGATCGTGAGCACACTTACATGTGCAAGTGTCGCCCGCA < 41bp 0.72827443464394 0.456611029033257 0.2547359 0.3152986 prediction 0.45654886928788 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228361 chr16:77228363 nonsynonymous SNV 0.584 3 23 hm5C_associated_SNPs_76193 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:77228339-77228364
64251 chr20 61599043 61599043 1 + G A rs910937 61599040 + 61599020 61599060 41 AGGGTGGGGTGGGCCTGGGTCCAGACCAGGCTCGCTGCTCT AGGGTGGGGTGGGCCTGGGTCCAAACCAGGCTCGCTGCTCT < 41bp 0.773028035059734 0.544758789251509 0.8608211 0.83831364 prediction 0.45653849161645 Functional Loss - SLC17A9 ENSG00000101194 UTR3 Human protein_coding chr20:61599040 chr20:61599043 . . 0 24 hm5C_associated_SNPs_76194 0 0 3 EIF3H POSTAR2 ENCODE chr20:61599021-61599056
64251 chr7 99048377 99048377 1 + C T BLCA 99048375 + 99048355 99048395 41 GAGTCATCTGTGTGAATTACCTCGTGGGATTCTGCCCGGAG GAGTCATCTGTGTGAATTACCTTGTGGGATTCTGCCCGGAG < 41bp 0.8452941582928 0.617050627093283 0.04595822 0.0405007 prediction 0.456487062399033 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99048375 chr7:99048377 synonymous SNV . 0 23 hm5C_associated_SNPs_76199 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr7:99048358-99048378
64251 chr5 145838711 145838711 1 + G A UCEC 145838708 + 145838688 145838728 41 CCCAGGCTCAGGCTCAGGCACAAGCTCAGGCCCAGGCCCAG CCCAGGCTCAGGCTCAGGCACAAACTCAGGCCCAGGCCCAG < 41bp 0.784815957530975 0.556572453365337 0.36362988 0.1860576 prediction 0.456487008331278 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838708 chr5:145838711 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_76200 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr5:145838700-145838720
64251 chr8 145065567 145065567 1 + A C KIRP 145065566 + 145065546 145065586 41 ACGGTCAGCCAGGGTACCCCCATGGCCCCAGCCCCTACCCC ACGGTCAGCCAGGGTACCCCCCTGGCCCCAGCCCCTACCCC < 41bp 0.790507178579059 0.562264149744793 0.8951341 0.3454473 prediction 0.456486057668533 Functional Loss - GRINA ENSG00000178719 CDS Human protein_coding chr8:145065566 chr8:145065567 nonsynonymous SNV 0.946 0 22 hm5C_associated_SNPs_76201 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145065555-145065600
64251 chr12 118454653 118454653 1 + G A PRAD 118454650 + 118454630 118454670 41 GCCATGGAGACCTCAGCACTCAAGCAGCAGGAGCAGCCCGC GCCATGGAGACCTCAGCACTCAAACAGCAGGAGCAGCCCGC < 41bp 0.751502113286169 0.52326174209977 0.41794524 0.18728897 prediction 0.456480742372797 Functional Loss - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118454650 chr12:118454653 synonymous SNV . 0 24 hm5C_associated_SNPs_76205 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:118454632-118454658
64251 chr17 79988658 79988658 1 + A C SKCM 79988654 + 79988634 79988674 41 GCTTACGTGCAGGCGTCCCCCGTGAGGACCCTGAGCCCCCC GCTTACGTGCAGGCGTCCCCCGTGCGGACCCTGAGCCCCCC < 41bp 0.924763432688427 0.696523985580978 0.40691712 0.4529861 prediction 0.456478894214897 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79988654 chr17:79988658 synonymous SNV . 0 25 hm5C_associated_SNPs_76207 0 0 1 SMNDC1 POSTAR2 ENCODE chr17:79988658-79988705
64251 chr4 1347003 1347003 1 + C T PRAD 1347001 + 1346981 1347021 41 CCGGTCTGGCACCCCTGACCCCCGGGACGGGGAGCAGCCCT CCGGTCTGGCACCCCTGACCCCTGGGACGGGGAGCAGCCCT < 41bp 0.805543148769065 0.577304789431276 0.13427442 0.18580571 prediction 0.456476718675578 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347001 chr4:1347003 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_76208 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:1346985-1347023
64251 chr17 7320632 7320632 1 + G A UCEC 7320629 + 7320609 7320649 41 GGGGACTCACGGGACTACTCCACGGAGCTGAGCGTCACCGT GGGGACTCACGGGACTACTCCACAGAGCTGAGCGTCACCGT < 41bp 0.782787743241799 0.554553578150327 0.9136399 0.7819196 prediction 0.456468330182944 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320629 chr17:7320632 synonymous SNV . 0 24 hm5C_associated_SNPs_76211 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7320594-7320633
64251 chr3 9962622 9962622 1 + C T rs139727834 9962620 + 9962600 9962640 41 TCTCCTCAGACTGCAGGGGGCTCGAAGTCTGGAACAGCATC TCTCCTCAGACTGCAGGGGGCTTGAAGTCTGGAACAGCATC < 41bp 0.728233538457659 0.465411837171808 0.22706956 0.37598437 prediction 0.456467076915319 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9962620 chr3:9962622 synonymous SNV . 0 23 hm5C_associated_SNPs_76213 0 0 2 EFTUD2 POSTAR2 ENCODE chr3:9962615-9962662
64251 chr8 48641525 48641525 1 + G T LUSC 48641523 + 48641503 48641543 41 TTTCCTGTGGGGACTGCTCCCGGGTGGTCACATCTCCTGTT TTTCCTGTGGGGACTGCTCCCGTGTGGTCACATCTCCTGTT < 41bp 0.728228423908159 0.41286716793269 0.9094279 0.6392362 prediction 0.456456847816317 Functional Loss - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48641523 chr8:48641525 synonymous SNV . 0 23 hm5C_associated_SNPs_76215 0 0 2 DDX24 POSTAR2 ENCODE chr8:48641519-48641589
64251 chr3 127379772 127379772 1 + G A COAD 127379769 + 127379749 127379789 41 CAGCTGGTTTGTCTGGCCAGCACGAGGAGGTGCCGGCCTTG CAGCTGGTTTGTCTGGCCAGCACAAGGAGGTGCCGGCCTTG < 41bp 0.797530558591839 0.569320533928407 0.87157977 0.86141634 prediction 0.456420049326864 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379769 chr3:127379772 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_76221 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:127379736-127379823
64251 chr22 19119283 19119283 1 - T G SARC 19119287 - 19119267 19119307 41 ATGTCCAGGTCGTGGCAGTACTTGACGGCGGAGGAGAGCTG ATGTCCAGGTCGTGGCAGTACTTGCCGGCGGAGGAGAGCTG < 41bp 0.728209836775227 0.33749303765811 0.41719046 0.3235601 prediction 0.456419673550455 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119287 chr22:19119283 nonsynonymous SNV 0.957 2 25 hm5C_associated_SNPs_76222 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:19119263-19119289
64251 chr1 171753468 171753468 1 + G T LUAD 171753465 + 171753445 171753485 41 AGCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTATGCC AGCGGCTGGCCGAGGCGGTGCAGTAGCGACAGCAGTATGCC < 41bp 0.928228046577454 0.700026106777289 0.88502586 0.8085253 prediction 0.456403879600331 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753465 chr1:171753468 stopgain 0.919 1 24 hm5C_associated_SNPs_76227 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:171753446-171753468
64251 chr22 50615458 50615458 1 + C T COAD 50615456 + 50615436 50615476 41 TGCTGGACGGAGCTGCGGGACGCGCTGCCCGGCGTGGACGC TGCTGGACGGAGCTGCGGGACGTGCTGCCCGGCGTGGACGC < 41bp 0.789252654638722 0.561053231318323 0.10363904 0.17431515 prediction 0.456398846640799 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615456 chr22:50615458 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_76229 0 0 1 RBM15 POSTAR2 ENCODE chr22:50615392-50615459
64251 chr2 174229538 174229538 1 + C T STAD 174229536 + 174229516 174229556 41 TGTTTAGCAATCAAGGAGACCGCGAAGGCGTACATTCCCGG TGTTTAGCAATCAAGGAGACCGTGAAGGCGTACATTCCCGG < 41bp 0.841218628438016 0.613027706428816 0.31229734 0.19473648 prediction 0.456381844018399 Functional Loss - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174229536 chr2:174229538 stopgain 0.001 0 23 hm5C_associated_SNPs_76237 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:174229523-174229570
64251 chr1 90048859 90048859 1 + G A UCEC 90048856 + 90048836 90048876 41 ACAGCCAGGTTTGGAGTCAGCTGGCATAGAAAGCCCAACTT ACAGCCAGGTTTGGAGTCAGCTGACATAGAAAGCCCAACTT < 41bp 0.759976412735912 0.531794948303268 0.24293938 0.28377053 prediction 0.456362928865288 Functional Loss - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048856 chr1:90048859 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_76240 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:90048852-90048873
64251 chr9 100071779 100071779 1 + G A BLCA 100071776 + 100071756 100071796 41 CTGAAGAGTGGCAGGATACCCATGATGAAGAAGGTGGAGAC CTGAAGAGTGGCAGGATACCCATAATGAAGAAGGTGGAGAC < 41bp 0.757661135742172 0.529482824076996 0.3502813 0.25123554 prediction 0.456356623330351 Functional Loss - CCDC180 ENSG00000197816 CDS Human protein_coding chr9:100071776 chr9:100071779 nonsynonymous SNV 0.281 0 24 hm5C_associated_SNPs_76241 0 0 2 PPIG POSTAR2 ENCODE chr9:100071695-100071823
64251 chr12 25260772 25260772 1 + G T COAD 25260769 + 25260749 25260789 41 AGTTATGACACAATAGCTTCCTGGGCAACAAATCTCAAGTC AGTTATGACACAATAGCTTCCTGTGCAACAAATCTCAAGTC < 41bp 0.728175216119532 0.347049493596938 0.046345174 0.012393445 prediction 0.456350432239063 Functional Loss - LRMP ENSG00000118308 CDS Human protein_coding chr12:25260769 chr12:25260772 nonsynonymous SNV 0.760 2 24 hm5C_associated_SNPs_76242 0 0 2 TROVE2 POSTAR2 ENCODE chr12:25260760-25260809
64251 chr9 135862164 135862164 1 + G T LUSC 135862162 + 135862142 135862182 41 TCTGGCCTCCTGCCCTTACCCCGGGTGAGTCAGAGCCCGGG TCTGGCCTCCTGCCCTTACCCCTGGTGAGTCAGAGCCCGGG < 41bp 0.905795023070019 0.677632100118938 0.9110658 0.19315326 prediction 0.456325845902163 Functional Loss - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135862162 chr9:135862164 synonymous SNV . 0 23 hm5C_associated_SNPs_76246 0 0 1 SF3B4 POSTAR2 ENCODE chr9:135862161-135862214
64251 chr19 5654163 5654163 1 + G A PAAD 5654160 + 5654140 5654180 41 GTGGAGAAAAGAGTAAGGACCAAGATGATCAGAAACCTGGC GTGGAGAAAAGAGTAAGGACCAAAATGATCAGAAACCTGGC < 41bp 0.769749318132899 0.541592083622622 0.7015432 0.40802872 prediction 0.456314469020553 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5654160 chr19:5654163 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_76252 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:5654077-5654194
64251 chr1 898587 898587 1 + C T SKCM 898585 + 898565 898605 41 CTCCATGTCCACGCGCCGGGCCCGGGTGGGAGTGGCTGCGG CTCCATGTCCACGCGCCGGGCCTGGGTGGGAGTGGCTGCGG < 41bp 0.728147086882367 0.475776348761652 0.17452118 0.22445053 prediction 0.456294173764734 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898585 chr1:898587 nonsynonymous SNV 0.841 4 23 hm5C_associated_SNPs_76254 0 0 1 RBFOX2 POSTAR2 ENCODE chr1:898571-898644
64251 chr1 149858932 149858932 1 + A C rs193136269 149858931 + 149858911 149858951 41 ATAAATGCAGACAAACAAACCAAGACCAAAGGCTCTTTTTA ATAAATGCAGACAAACAAACCCAGACCAAAGGCTCTTTTTA < 41bp 0.783891975128113 0.555747971527889 0.112730324 0.03849688 prediction 0.456288007200449 Functional Loss - HIST2H2AC ENSG00000184260 UTR3 Human protein_coding chr1:149858931 chr1:149858932 . . 0 22 hm5C_associated_SNPs_76255 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:149858820-149858940
64251 chr3 32860396 32860396 1 + T C SKCM 32860395 + 32860375 32860415 41 TCTCAGTGTTTCCCGAGCGCCTCGGCTTCTGCCAGCACCAC TCTCAGTGTTTCCCGAGCGCCCCGGCTTCTGCCAGCACCAC < 41bp 0.731580777884807 0.503437771926366 0.3311196 0.35262966 prediction 0.456286011916883 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32860395 chr3:32860396 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_76256 0 0 2 RBM15 POSTAR2 ENCODE chr3:32860355-32860410
64251 chr1 205501843 205501843 1 + A C rs8027 205501839 + 205501819 205501859 41 GCCCACCTCAGGCCCCCACCCTCCACTCCTCCCCACGGTAC GCCCACCTCAGGCCCCCACCCTCCCCTCCTCCCCACGGTAC < 41bp 0.728139551084091 0.377265424175511 0.9157349 0.072333515 prediction 0.456279102168181 Functional Loss - CDK18 ENSG00000117266 UTR3 Human protein_coding chr1:205501839 chr1:205501843 . . 0 25 hm5C_associated_SNPs_76260 0 0 1 HNRNPK POSTAR2 ENCODE chr1:205501800-205501849
64251 chr1 160182974 160182974 1 + A C ACC 160182973 + 160182953 160182993 41 CTCACTATGGTGGTTGACTACAGAACCCGTGTGCTGAAGAT CTCACTATGGTGGTTGACTACCGAACCCGTGTGCTGAAGAT < 41bp 0.800187229744205 0.572048448170881 0.23221874 0.15547511 prediction 0.456277563146648 Functional Loss - PEA15 ENSG00000162734 CDS Human protein_coding chr1:160182973 chr1:160182974 synonymous SNV . 0 22 hm5C_associated_SNPs_76263 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:160182931-160182998
64251 chr11 64875291 64875291 1 + G T SARC 64875289 + 64875269 64875309 41 CCCCAGGGGTCCACGCGCTGCTGCGGAAGCTGCAGTTCCTC CCCCAGGGGTCCACGCGCTGCTTCGGAAGCTGCAGTTCCTC < 41bp 0.728135037620251 0.378728841362141 0.71896815 0.11413771 prediction 0.456270075240503 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64875289 chr11:64875291 synonymous SNV . 0 23 hm5C_associated_SNPs_76265 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chr11:64875266-64875303
64251 chr19 5135484 5135484 1 + G A COAD 5135481 + 5135461 5135501 41 TTCACCTCTGGCGGTGAGAACACGGAGCCGCTGCCTGCCAA TTCACCTCTGGCGGTGAGAACACAGAGCCGCTGCCTGCCAA < 41bp 0.797205532909755 0.569070962108929 0.923326 0.38144532 prediction 0.45626914160165 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5135481 chr19:5135484 synonymous SNV . 0 24 hm5C_associated_SNPs_76266 0 0 3 FXR2 POSTAR2 ENCODE chr19:5135438-5135498
64251 chr13 28009581 28009581 1 + T C PAAD 28009580 + 28009560 28009600 41 ATTCCCAAAGGTCAAAAAATCTCGTGAAAAACGGAGTTTGG ATTCCCAAAGGTCAAAAAATCCCGTGAAAAACGGAGTTTGG < 41bp 0.741509008381975 0.513383479887171 0.37861782 0.4056943 prediction 0.456251056989608 Functional Loss - GTF3A ENSG00000122034 CDS Human protein_coding chr13:28009580 chr13:28009581 synonymous SNV . 0 22 hm5C_associated_SNPs_76269 0 0 5 AGGF1 POSTAR2 ENCODE chr13:28009569-28009643
64251 chr3 5220660 5220660 1 + A C rs181573664 5220659 + 5220639 5220679 41 CATGTGTAGAGCTTTAAAAACAGAAAAAAAACCCCATATAC CATGTGTAGAGCTTTAAAAACCGAAAAAAAACCCCATATAC < 41bp 0.793517247310553 0.565396418376614 0.6855907 0.3441802 prediction 0.456241657867877 Functional Loss - ARL8B ENSG00000233912 ncRNA_intronic Human antisense chr3:5220659 chr3:5220660 . . 0 22 hm5C_associated_SNPs_76271 0 0 11 MOV10 POSTAR2 GSE37524,GSM921128 chr3:5220630-5220661
64251 chr17 37627629 37627629 1 + C T SARC 37627626 + 37627606 37627646 41 ACTGAAAGAGGAGATTGTTACTCCAAAGGAGACAGAAACAT ACTGAAAGAGGAGATTGTTACTCTAAAGGAGACAGAAACAT < 41bp 0.728120367802921 0.491834305762382 0.96160245 0.9319575 prediction 0.456240735605843 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37627626 chr17:37627629 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76273 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37627362-37627655
64251 chr19 4433403 4433403 1 + C T CESC 4433401 + 4433381 4433421 41 AGCTATGTGACATCGGTGCCCTCGGCCCCCAAAGAGGACAG AGCTATGTGACATCGGTGCCCTTGGCCCCCAAAGAGGACAG < 41bp 0.728117817415686 0.464793886586889 0.25758258 0.28387344 prediction 0.456235634831371 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4433401 chr19:4433403 nonsynonymous SNV 0.048 1 23 hm5C_associated_SNPs_76274 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:4433364-4433418
64251 chr19 4433404 4433404 1 + G A STAD 4433401 + 4433381 4433421 41 AGCTATGTGACATCGGTGCCCTCGGCCCCCAAAGAGGACAG AGCTATGTGACATCGGTGCCCTCAGCCCCCAAAGAGGACAG < 41bp 0.728117817415686 0.486160965672915 0.25758258 0.18649894 prediction 0.456235634831371 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4433401 chr19:4433404 synonymous SNV . 0 24 hm5C_associated_SNPs_76275 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:4433364-4433418
64251 chr1 33959045 33959045 1 + T C STAD 33959044 + 33959024 33959064 41 TCTATGAGGAACTGGACTCGCTGATGAGGGCTCGGGCTGCA TCTATGAGGAACTGGACTCGCCGATGAGGGCTCGGGCTGCA < 41bp 0.728112712335555 0.481625456674523 0.30777436 0.46967834 prediction 0.45622542467111 Functional Loss - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33959044 chr1:33959045 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_76277 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:33959037-33959055
64251 chr17 6941553 6941553 1 + G A CESC 6941550 + 6941530 6941570 41 CGCCGACGATCCCTGGCCACCGGGCTGGCACTGACAGGCGT CGCCGACGATCCCTGGCCACCGGACTGGCACTGACAGGCGT < 41bp 0.72810942576301 0.478535951753526 0.4493155 0.27518874 prediction 0.456218851526019 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941550 chr17:6941553 synonymous SNV . 0 24 hm5C_associated_SNPs_76280 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:6941545-6941557
64251 chr11 10517233 10517233 1 + G A STAD 10517230 + 10517210 10517250 41 GCCTACTGGTTCATCCAGCACAAGGTCTACTCTCCCAACAT GCCTACTGGTTCATCCAGCACAAAGTCTACTCTCCCAACAT < 41bp 0.786320427453127 0.55821138977086 0.4840311 0.134639 prediction 0.456218075364534 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10517230 chr11:10517233 synonymous SNV . 0 24 hm5C_associated_SNPs_76281 0 0 1 ZNF622 POSTAR2 ENCODE chr11:10517174-10517295
64251 chr7 98258429 98258429 1 + C T rs181890605 98258427 + 98258407 98258447 41 CTCGCAGCAAGCGGCTACCCCCCGATCTGCAAAAGGGCCTC CTCGCAGCAAGCGGCTACCCCCTGATCTGCAAAAGGGCCTC < 41bp 0.728108900575394 0.482105668769011 0.026933014 0.052189767 prediction 0.456217801150789 Functional Loss - NPTX2 ENSG00000106236 UTR3 Human protein_coding chr7:98258427 chr7:98258429 . . 0 23 hm5C_associated_SNPs_76282 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:98258404-98258438
64251 chr6 33359610 33359610 1 + A C rs144394879 33359606 + 33359586 33359626 41 GGGTGGTGGCCGTTGGAATTCAAAAGTGGCGGGTGTGGCGC GGGTGGTGGCCGTTGGAATTCAAACGTGGCGGGTGTGGCGC < 41bp 0.728106876675585 0.49395149580645 0.3413456 0.42548734 prediction 0.456213753351171 Functional Loss - KIFC1 ENSG00000237649 UTR5 Human protein_coding chr6:33359606 chr6:33359610 . . 0 25 hm5C_associated_SNPs_76285 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585668 chr6:33359601-33359622
64251 chr19 2243439 2243439 1 + G A LUSC 2243436 + 2243416 2243456 41 CCATGGACTTCCAGCATCGCCCCGGGGGCAAGACCGGGAGC CCATGGACTTCCAGCATCGCCCCAGGGGCAAGACCGGGAGC < 41bp 0.784473205259955 0.5563667657211 0.3509336 0.13421604 prediction 0.45621287907771 Functional Loss - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2243436 chr19:2243439 nonsynonymous SNV 0.937 4 24 hm5C_associated_SNPs_76286 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:2243382-2243449
64251 chr2 70485372 70485372 1 + G A CESC 70485369 + 70485349 70485389 41 TGCTGTGCAGCTGCGGATGCCCCGAGGGCGCCGAGCTGCGT TGCTGTGCAGCTGCGGATGCCCCAAGGGCGCCGAGCTGCGT < 41bp 0.747580967278457 0.51948257848174 0.11634904 0.32172704 prediction 0.456196777593433 Functional Loss - PCYOX1 ENSG00000116005 CDS Human protein_coding chr2:70485369 chr2:70485372 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_76292 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:70485353-70485372
64251 chr19 18499830 18499830 1 + A C rs114929417 18499826 + 18499806 18499846 41 TGTGGAATGGGCTCAAGGTTCCTGAGACACCCGATTCCTGC TGTGGAATGGGCTCAAGGTTCCTGCGACACCCGATTCCTGC < 41bp 0.72809418168148 0.346871347314364 0.1468848 0.090331376 prediction 0.456188363362961 Functional Loss - GDF15 ENSG00000130513 UTR3 Human protein_coding chr19:18499826 chr19:18499830 . . 0 25 hm5C_associated_SNPs_76294 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:18499802-18499837
64251 chrX 44928907 44928907 1 + C T LUAD 44928905 + 44928885 44928925 41 CCACTGGGCCTTCCCAGCATCTCCAGGCAGCTGGCTCTGGT CCACTGGGCCTTCCCAGCATCTTCAGGCAGCTGGCTCTGGT < 41bp 0.728092150365871 0.425742731941042 0.95574486 0.20775995 prediction 0.456184300731743 Functional Loss - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44928905 chrX:44928907 synonymous SNV . 0 23 hm5C_associated_SNPs_76296 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:44928906-44928907
64251 chr19 38573359 38573359 1 + C T STAD 38573357 + 38573337 38573377 41 GCCTCGGCCATGGCCTCCCTCACGGCCTCGCGGGCCCACAG GCCTCGGCCATGGCCTCCCTCATGGCCTCGCGGGCCCACAG < 41bp 0.759632711556078 0.531541344799296 0.92697096 0.9246822 prediction 0.456182733513563 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573357 chr19:38573359 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_76297 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:38573326-38573359
64251 chr19 13051231 13051231 1 + G A COAD 13051228 + 13051208 13051248 41 AACCGGAAGACTGGGATGAGCGGGCCAAGATCGATGATCCC AACCGGAAGACTGGGATGAGCGGACCAAGATCGATGATCCC < 41bp 0.72808933548063 0.48606681819198 0.8570601 0.6884311 prediction 0.456178670961261 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13051228 chr19:13051231 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76298 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:13051056-13051262
64251 chr12 122623425 122623425 1 + G A SKCM 122623422 + 122623402 122623442 41 ACCCGGCGCCAGTTTGATCACATGAAAGACATGTTTGACGA ACCCGGCGCCAGTTTGATCACATAAAAGACATGTTTGACGA < 41bp 0.742691839723933 0.51461114988872 0.45965412 0.3940984 prediction 0.456161379670425 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122623422 chr12:122623425 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76302 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:122623419-122623497
64251 chr16 57416511 57416511 1 + C T CESC 57416509 + 57416489 57416529 41 GTGTGGGGTCAGGGACAGAGCCCCAGGCCAGAGAACTCTCT GTGTGGGGTCAGGGACAGAGCCTCAGGCCAGAGAACTCTCT < 41bp 0.728075110894015 0.4720777944028 0.10015607 0.09967986 prediction 0.456150221788029 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416509 chr16:57416511 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_76306 0 0 6 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:57416506-57416542
64251 chr15 63336325 63336325 1 + G T STAD 63336322 + 63336302 63336342 41 TCAAAGATGCCCAGGAGAAGCTGGAGCTGGCAGAGAAAAAG TCAAAGATGCCCAGGAGAAGCTGTAGCTGGCAGAGAAAAAG < 41bp 0.910412458838633 0.682342170668892 0.4082287 0.20788538 prediction 0.456140576339484 Functional Loss - TPM1 ENSG00000140416 CDS Human protein_coding chr15:63336322 chr15:63336325 stopgain 1.000 1 24 hm5C_associated_SNPs_76309 0 0 3 GRWD1 POSTAR2 ENCODE chr15:63336221-63336345
64251 chr8 61496798 61496798 1 + G T UCEC 61496795 + 61496775 61496815 41 AGAATCCTTTCGTTCCATCACAAGGTCGTATTACAGAGGTG AGAATCCTTTCGTTCCATCACAATGTCGTATTACAGAGGTG < 41bp 0.72806421083939 0.333157679697675 0.6950297 0.10136896 prediction 0.456128421678779 Functional Loss - RAB2A ENSG00000104388 CDS Human protein_coding chr8:61496795 chr8:61496798 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_76314 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:61496776-61496798
64251 chr20 32378854 32378854 1 + C T rs558538914 32378852 + 32378832 32378872 41 TTCAGCCGCCGTGCCCACCTCGCCGAGCATCAGCGCGCCCA TTCAGCCGCCGTGCCCACCTCGTCGAGCATCAGCGCGCCCA < 41bp 0.816598903523455 0.588534814264271 0.55460346 0.3618262 prediction 0.456128178518367 Functional Loss - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32378852 chr20:32378854 nonsynonymous SNV 0.925 0 23 hm5C_associated_SNPs_76315 0 0 1 PUM2 POSTAR2 ENCODE chr20:32378842-32378888
64251 chr16 2086453 2086453 1 + G A STAD 2086450 + 2086430 2086470 41 CAGTACATCCGCTCTGTGGACCCGGGCTCACCTGCCGCCCG CAGTACATCCGCTCTGTGGACCCAGGCTCACCTGCCGCCCG < 41bp 0.728062738076196 0.483212510428638 0.7897475 0.30864626 prediction 0.456125476152392 Functional Loss - SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2086450 chr16:2086453 synonymous SNV . 0 24 hm5C_associated_SNPs_76316 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:2086435-2086462
64251 chr19 4154995 4154995 1 + G A SKCM 4154992 + 4154972 4155012 41 GCATCCTGAGACACGTGGAGCTGGGCGAGGGCTGGGGTCAC GCATCCTGAGACACGTGGAGCTGAGCGAGGGCTGGGGTCAC < 41bp 0.782010336328529 0.553948192518458 0.82144725 0.7799732 prediction 0.456124287620142 Functional Loss - CREB3L3 ENSG00000060566 CDS Human protein_coding chr19:4154992 chr19:4154995 nonsynonymous SNV 0.140 1 24 hm5C_associated_SNPs_76317 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:4154988-4155018
64251 chr9 137020841 137020841 1 + G A UCEC 137020838 + 137020818 137020858 41 CTGAAGACGTACACTGGCCACAAGAATGAGAAATACTGCAT CTGAAGACGTACACTGGCCACAAAAATGAGAAATACTGCAT < 41bp 0.728059667298304 0.494690648516736 0.06268364 0.05875662 prediction 0.456119334596607 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137020838 chr9:137020841 synonymous SNV . 0 24 hm5C_associated_SNPs_76318 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:137020827-137020842
64251 chr9 137020839 137020839 1 + A C UCEC 137020838 + 137020818 137020858 41 CTGAAGACGTACACTGGCCACAAGAATGAGAAATACTGCAT CTGAAGACGTACACTGGCCACCAGAATGAGAAATACTGCAT < 41bp 0.728059667298304 0.457874472428997 0.06268364 0.07227206 prediction 0.456119334596607 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137020838 chr9:137020839 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_76319 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:137020827-137020842
64251 chr9 37428495 37428495 1 + C T CESC 37428493 + 37428473 37428513 41 CCCCTCAGTGGTGGCTGGACCTCGTGGAAGCCCCTCTGGCT CCCCTCAGTGGTGGCTGGACCTTGTGGAAGCCCCTCTGGCT < 41bp 0.79530649318115 0.567250475896224 0.47078228 0.16762584 prediction 0.456112034569853 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37428493 chr9:37428495 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_76322 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:37428480-37428500
64251 chr17 79410194 79410194 1 + G A CESC 79410191 + 79410171 79410211 41 AGCGCAAGGCTGGCGCCTACCTGGACCCCTTTGGCAGTGGC AGCGCAAGGCTGGCGCCTACCTGAACCCCTTTGGCAGTGGC < 41bp 0.765286885265531 0.537241586222319 0.27984115 0.12435871 prediction 0.456090598086424 Functional Loss - BAHCC1 ENSG00000171282 CDS Human other chr17:79410191 chr17:79410194 nonsynonymous SNV 0.761 0 24 hm5C_associated_SNPs_76325 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:79410170-79410213
64251 chr7 75614201 75614201 1 + G T SARC 75614198 + 75614178 75614218 41 CCGCGTACCAACGTGCTGTACGAGCTGGCGCAGTACGCCTC CCGCGTACCAACGTGCTGTACGATCTGGCGCAGTACGCCTC < 41bp 0.728042478261948 0.325605710567487 0.22977415 0.021491677 prediction 0.456084956523896 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75614198 chr7:75614201 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_76327 0 0 6 DDX55 POSTAR2 ENCODE chr7:75614123-75614209
64251 chr5 916028 916028 1 + G A SKCM 916025 + 916005 916045 41 TTTTCTTTACACAGGAAGAGCGAGGGCCTCAGCGGCCGGGT TTTTCTTTACACAGGAAGAGCGAAGGCCTCAGCGGCCGGGT < 41bp 0.799310182277619 0.571271376227616 0.89321357 0.48829907 prediction 0.456077612100006 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:916025 chr5:916028 synonymous SNV . 0 24 hm5C_associated_SNPs_76329 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:916016-916061
64251 chr1 171755056 171755056 1 + G A SKCM 171755053 + 171755033 171755073 41 GAGACCGAGTGGCTCTTTGGCATGGATGAGGGCCGGAAACA GAGACCGAGTGGCTCTTTGGCATAGATGAGGGCCGGAAACA < 41bp 0.7280341769918 0.486539008200578 0.64322865 0.5451024 prediction 0.456068353983599 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755053 chr1:171755056 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_76334 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:171755052-171755062
64251 chr19 36124154 36124154 1 + G T BLCA 36124152 + 36124132 36124172 41 TGGCTGCACTGAGGCCCCCTCTGGTGAGTGTGAACAGGGAA TGGCTGCACTGAGGCCCCCTCTTGTGAGTGTGAACAGGGAA < 41bp 0.728031102501583 0.380571254914734 0.18924648 0.062154323 prediction 0.456062205003166 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124152 chr19:36124154 synonymous SNV . 0 23 hm5C_associated_SNPs_76335 0 0 3 PRPF8 POSTAR2 ENCODE chr19:36124150-36124206
64251 chr9 133498142 133498142 1 + G A SKCM 133498139 + 133498119 133498159 41 GGGATTGTAATAGGAAGAAACGGGGAAATGATCAAAAAGAT GGGATTGTAATAGGAAGAAACGGAGAAATGATCAAAAAGAT < 41bp 0.748233519523228 0.520209227719207 0.88948286 0.84496665 prediction 0.456048583608041 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133498139 chr9:133498142 synonymous SNV . 0 24 hm5C_associated_SNPs_76337 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr9:133498108-133498148
64251 chr3 9776203 9776203 1 + G A UCEC 9776200 + 9776180 9776220 41 TGTCAGAGGATGAGGAAGCCCCCGAGGAGGCCCCTGAGAAT TGTCAGAGGATGAGGAAGCCCCCAAGGAGGCCCCTGAGAAT < 41bp 0.756914267668009 0.528893285664759 0.38031593 0.21669862 prediction 0.456041964006501 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9776200 chr3:9776203 nonsynonymous SNV 0.870 1 24 hm5C_associated_SNPs_76338 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:9776197-9776232
64251 chr17 38318122 38318122 1 + C T LUAD 38318119 + 38318099 38318139 41 AAGGGAGAAGAAAAGCCTGACACCAAAAGCACTGTGACTGG AAGGGAGAAGAAAAGCCTGACACTAAAAGCACTGTGACTGG < 41bp 0.731641636642669 0.503621930959515 0.05666536 0.08464503 prediction 0.456039411366309 Functional Loss - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38318119 chr17:38318122 synonymous SNV . 0 24 hm5C_associated_SNPs_76341 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003588 chr17:38318106-38318127
64251 chr2 121747144 121747144 1 + G T UCEC 121747141 + 121747121 121747161 41 GCCCCCTCCCAGGGCATCCCCAGGGTAAACTACATGCAGCA GCCCCCTCCCAGGGCATCCCCAGTGTAAACTACATGCAGCA < 41bp 0.728010242529053 0.339014889954419 0.92614526 0.17392105 prediction 0.456020485058106 Functional Loss - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121747141 chr2:121747144 nonsynonymous SNV 0.024 4 24 hm5C_associated_SNPs_76344 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:121747106-121747144
64251 chr1 41285881 41285881 1 + C T GBM 41285879 + 41285859 41285899 41 CCCTGAAGGTCCAGGAGCAGCACCGGCAGAAGCACTTCGAG CCCTGAAGGTCCAGGAGCAGCATCGGCAGAAGCACTTCGAG < 41bp 0.728005881277542 0.466090348199746 0.419186 0.43775037 prediction 0.456011762555083 Functional Loss - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41285879 chr1:41285881 synonymous SNV . 0 23 hm5C_associated_SNPs_76347 0 0 1 DDX24 POSTAR2 ENCODE chr1:41285880-41285937
64251 chr19 11998756 11998756 1 + C T rs3810315 11998754 + 11998734 11998774 41 ACGCTATGCCCTGCTGTAGTCACAGGAGGTGTAGAGAGGAC ACGCTATGCCCTGCTGTAGTCATAGGAGGTGTAGAGAGGAC < 41bp 0.773433594152591 0.54542934590295 0.89517766 0.9004129 prediction 0.456008496499281 Functional Loss - ZNF69 ENSG00000198429 CDS Human protein_coding chr19:11998754 chr19:11998756 synonymous SNV . 0 23 hm5C_associated_SNPs_76348 0 0 2 TARBP2 POSTAR2 GSE49648,GSM1204358 chr19:11998740-11998760
64251 chr4 48385778 48385778 1 + G A COAD 48385775 + 48385755 48385795 41 AGTGCCAAACGGAGGAATACCTCGTATGCAACCTCAGGCTT AGTGCCAAACGGAGGAATACCTCATATGCAACCTCAGGCTT < 41bp 0.748722720063198 0.5207189559796 0.12707561 0.09411758 prediction 0.456007528167196 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48385775 chr4:48385778 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_76349 0 0 2 IGF2BP1 POSTAR2 ENCODE chr4:48385708-48385799
64251 chr19 10823451 10823451 1 + G T LAML 10823449 + 10823429 10823469 41 CACAGCGCTTTGGCTCTGCCCTGGTGCCCACTGGGAACCTG CACAGCGCTTTGGCTCTGCCCTTGTGCCCACTGGGAACCTG < 41bp 0.727999495311761 0.371950074523576 0.23069566 0.12845433 prediction 0.455998990623521 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823449 chr19:10823451 synonymous SNV . 0 23 hm5C_associated_SNPs_76352 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10823436-10823472
64251 chr22 21363655 21363655 1 - T G UCEC 21363659 - 21363639 21363679 41 TCTGGGTTCGTGTCTCTGCTCATGAAGCGGCTCTCGGTGGA TCTGGGTTCGTGTCTCTGCTCATGCAGCGGCTCTCGGTGGA < 41bp 0.727998521099595 0.350738780778336 0.40353748 0.31023166 prediction 0.455997042199191 Functional Loss - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363659 chr22:21363655 . . 0 25 hm5C_associated_SNPs_76353 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:21363640-21363660
64251 chr12 57850274 57850274 1 + G T LUAD 57850272 + 57850252 57850292 41 CCAATGAGCCTGGAGCAGGCCGGGCCAGGAGGAGGACCCCC CCAATGAGCCTGGAGCAGGCCGTGCCAGGAGGAGGACCCCC < 41bp 0.727998173061995 0.384129012438523 0.84154963 0.5442539 prediction 0.455996346123989 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850272 chr12:57850274 synonymous SNV . 0 23 hm5C_associated_SNPs_76354 0 0 2 SND1 POSTAR2 ENCODE chr12:57850205-57850294
64251 chr22 21288426 21288426 1 + G T UCEC 21288423 + 21288403 21288443 41 ACCTGCAGTTTCCGGTTCTCCTGGGGCAGCAATCACCCCTT ACCTGCAGTTTCCGGTTCTCCTGTGGCAGCAATCACCCCTT < 41bp 0.926511158954657 0.698534966277002 0.9226734 0.39338484 prediction 0.455952385355309 Functional Loss - CRKL ENSG00000099942 CDS Human protein_coding chr22:21288423 chr22:21288426 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76367 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:21288341-21288441
64251 chr19 45451745 45451745 1 + C T BLCA 45451743 + 45451723 45451763 41 GTCTCTGGACACTATGGGCACACGACTCCTCCCAGCTCTGT GTCTCTGGACACTATGGGCACATGACTCCTCCCAGCTCTGT < 41bp 0.80327013295852 0.575302822090451 0.03346762 0.07593316 prediction 0.455934621736138 Functional Loss - APOC2 ENSG00000224916;ENSG00000234906 CDS Human other chr19:45451743 chr19:45451745 stopgain 0.158 0 23 hm5C_associated_SNPs_76376 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45451723-45451746
64251 chr11 12901363 12901363 1 + C T UCEC 12901361 + 12901341 12901381 41 GCTGGGGCTGCCTGGGATTCCACGCCCGACCTTCCCAGGGG GCTGGGGCTGCCTGGGATTCCATGCCCGACCTTCCCAGGGG < 41bp 0.817322854658814 0.589355900503982 0.29651025 0.32793054 prediction 0.455933908309664 Functional Loss - TEAD1 ENSG00000187079 CDS Human protein_coding chr11:12901361 chr11:12901363 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_76377 0 0 1 PRPF8 POSTAR2 ENCODE chr11:12901358-12901465
64251 chr1 156702141 156702141 1 + G T BRCA 156702138 + 156702118 156702158 41 GGCGTGTGCCCTGGCCTTTACCCGGATGCCTGGCTTTCAGA GGCGTGTGCCCTGGCCTTTACCCTGATGCCTGGCTTTCAGA < 41bp 0.72796048362143 0.320518633446887 0.9192251 0.30954415 prediction 0.45592096724286 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702138 chr1:156702141 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_76381 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156702115-156702151
64251 chr1 156702140 156702140 1 + C T LGG 156702138 + 156702118 156702158 41 GGCGTGTGCCCTGGCCTTTACCCGGATGCCTGGCTTTCAGA GGCGTGTGCCCTGGCCTTTACCTGGATGCCTGGCTTTCAGA < 41bp 0.72796048362143 0.451892295080522 0.9192251 0.37732977 prediction 0.45592096724286 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702138 chr1:156702140 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_76382 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156702115-156702151
64251 chr17 4789811 4789811 1 + C T UCEC 4789809 + 4789789 4789829 41 ACTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGAAGTT ACTTACCTGAGCCGCCCACCCATGGAGCAGCTACTGAAGTT < 41bp 0.727960341823892 0.488539865534776 0.3823194 0.39992347 prediction 0.455920683647785 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4789809 chr17:4789811 nonsynonymous SNV 0.136 4 23 hm5C_associated_SNPs_76383 0 0 4 DDX24 POSTAR2 ENCODE chr17:4789779-4789812
64251 chr16 30999441 30999441 1 + G A CESC 30999438 + 30999418 30999458 41 TTCGGCTATGAGCCCCTGTTCTCGTGGGAGGATAGCCGGAC TTCGGCTATGAGCCCCTGTTCTCATGGGAGGATAGCCGGAC < 41bp 0.781898688240527 0.553939754481704 0.40888152 0.30309308 prediction 0.455917867517648 Functional Loss - HSD3B7 ENSG00000099377 CDS Human protein_coding chr16:30999438 chr16:30999441 synonymous SNV . 0 24 hm5C_associated_SNPs_76384 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:30999417-30999476
64251 chr9 124522422 124522422 1 + G T LUAD 124522419 + 124522399 124522439 41 AGAAGGAGCGCAACAGTTACCTGGGCCTGGTGAGCCTACCT AGAAGGAGCGCAACAGTTACCTGTGCCTGGTGAGCCTACCT < 41bp 0.727951159458663 0.327938763284463 0.5146617 0.2257472 prediction 0.455902318917327 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124522419 chr9:124522422 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_76386 0 0 2 FASTKD2 POSTAR2 ENCODE chr9:124522410-124522475
64251 chr19 6751284 6751284 1 + C T CESC 6751282 + 6751262 6751302 41 GCTTCTGGGCCACGGGGAGCCCCAGGACCTATGCACTTTAT GCTTCTGGGCCACGGGGAGCCCTAGGACCTATGCACTTTAT < 41bp 0.727948185491153 0.483435966204213 0.32242483 0.22223711 prediction 0.455896370982305 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751282 chr19:6751284 stopgain 0.964 0 23 hm5C_associated_SNPs_76387 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr19:6751252-6751305
64251 chr1 205210708 205210708 1 + C T COAD 205210706 + 205210686 205210726 41 GTTCCACAGCCGCCGTCGGTCTCGGGAAAGGGAGCACCAGA GTTCCACAGCCGCCGTCGGTCTTGGGAAAGGGAGCACCAGA < 41bp 0.829157851708061 0.601221300110085 0.07310116 0.10816616 prediction 0.455873103195952 Functional Loss - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205210706 chr1:205210708 nonsynonymous SNV 0.983 2 23 hm5C_associated_SNPs_76390 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:205210700-205210720
64251 chr7 148489858 148489858 1 + C T UCEC 148489856 + 148489836 148489876 41 GCTATCCTGCTTCAGTACAACACGGAAGATGCCTACACTGT GCTATCCTGCTTCAGTACAACATGGAAGATGCCTACACTGT < 41bp 0.727936109542409 0.451564938534281 0.20484644 0.19485077 prediction 0.455872219084817 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148489856 chr7:148489858 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_76391 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148489833-148489890
64251 chr7 100304707 100304707 1 + C T OV 100304705 + 100304685 100304725 41 ATCAACCGCGCCATCAACATCGCGCTGCAGCTGCAGGCGGG ATCAACCGCGCCATCAACATCGTGCTGCAGCTGCAGGCGGG < 41bp 0.790410493154476 0.562477005842708 0.37586528 0.4250587 prediction 0.455866974623537 Functional Loss - POP7 ENSG00000172336 CDS Human protein_coding chr7:100304705 chr7:100304707 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_76392 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:100304657-100304710
64251 chr6 27861614 27861614 1 + C T SKCM 27861612 + 27861592 27861632 41 GCCGTCACCAAGTACACCAGCTCCAAGTGAGCTCTCGCAGC GCCGTCACCAAGTACACCAGCTTCAAGTGAGCTCTCGCAGC < 41bp 0.771713500045424 0.543781079528347 0.53266305 0.062664896 prediction 0.455864841034153 Functional Loss - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861612 chr6:27861614 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_76393 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27861520-27861640
64251 chr16 68877550 68877550 1 + G T OV 68877547 + 68877527 68877567 41 GCCCGACAGGCCGTGGGCAGCGGGGCTCAGGAGACATGCGG GCCCGACAGGCCGTGGGCAGCGGTGCTCAGGAGACATGCGG < 41bp 0.925937723425638 0.69800883741857 0.90643877 0.8168508 prediction 0.455857772014135 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68877547 chr16:68877550 synonymous SNV . 0 24 hm5C_associated_SNPs_76394 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:68877533-68877571
64251 chr7 115890320 115890320 1 + G A BLCA 115890317 + 115890297 115890337 41 TGGCAAAGCAGCTCCCTGCACATGACCAGGACCCTTCAAAG TGGCAAAGCAGCTCCCTGCACATAACCAGGACCCTTCAAAG < 41bp 0.758860996028132 0.530935758095376 0.14035383 0.07339224 prediction 0.455850475865512 Functional Loss - TES ENSG00000135269 CDS Human protein_coding chr7:115890317 chr7:115890320 nonsynonymous SNV 0.981 5 24 hm5C_associated_SNPs_76396 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:115890301-115890390
64251 chr12 69145871 69145871 1 + G T LUAD 69145869 + 69145849 69145889 41 CAATGCAGCTGCTGTACTACCAGGCTCCGATGTCATCTGCC CAATGCAGCTGCTGTACTACCATGCTCCGATGTCATCTGCC < 41bp 0.72791909892473 0.372335553137792 0.71500194 0.107500106 prediction 0.45583819784946 Functional Loss - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69145869 chr12:69145871 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_76399 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:69145838-69145882
64251 chr17 61769160 61769160 1 + G A STAD 61769157 + 61769137 61769177 41 GAGCGTGACCCGAAAGTACACGCGGCAGATCCTGGAGGGCA GAGCGTGACCCGAAAGTACACGCAGCAGATCCTGGAGGGCA < 41bp 0.74297833391695 0.515060923560665 0.2216559 0.17326787 prediction 0.455834820712569 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61769157 chr17:61769160 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_76402 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr17:61769144-61769168
64251 chr2 201760010 201760010 1 + G A BLCA 201760007 + 201759987 201760027 41 GACTGGTAATGAGGAACAAACACGGATTAATCTGAATTGTA GACTGGTAATGAGGAACAAACACAGATTAATCTGAATTGTA < 41bp 0.741891136001725 0.513977195721097 0.31492174 0.10535446 prediction 0.455827880561256 Functional Loss - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201760007 chr2:201760010 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_76406 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:201759993-201760021
64251 chr12 52451147 52451147 1 + G A UCEC 52451144 + 52451124 52451164 41 TCTGCCTGCCAGGTCTAAGCCAGGCGAGGGCAAGCTCATCT TCTGCCTGCCAGGTCTAAGCCAGACGAGGGCAAGCTCATCT < 41bp 0.72791387568374 0.48775249336779 0.7294399 0.47421643 prediction 0.455827751367481 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52451144 chr12:52451147 nonsynonymous SNV 0.379 1 24 hm5C_associated_SNPs_76407 0 0 1 DGCR8 POSTAR2 ENCODE chr12:52451124-52451166
64251 chr15 89820092 89820092 1 + C T rs376956791 89820090 + 89820070 89820110 41 CAAACCAGCATGCATGTAAGCTCGGAGCTAATATCCTGTTG CAAACCAGCATGCATGTAAGCTTGGAGCTAATATCCTGTTG < 41bp 0.727913693601497 0.445313613910088 0.12306556 0.15915611 prediction 0.455827387202995 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89820090 chr15:89820092 synonymous SNV . 0 23 hm5C_associated_SNPs_76408 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:89820078-89820092
64251 chr15 89820093 89820093 1 + G A UCEC 89820090 + 89820070 89820110 41 CAAACCAGCATGCATGTAAGCTCGGAGCTAATATCCTGTTG CAAACCAGCATGCATGTAAGCTCAGAGCTAATATCCTGTTG < 41bp 0.727913693601497 0.498279562909801 0.12306556 0.11692512 prediction 0.455827387202995 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89820090 chr15:89820093 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_76409 1 0 3 FUS POSTAR2 DRA001158,DRS012384 chr15:89820078-89820110
64251 chrX 153662667 153662667 1 + G A UCEC 153662664 + 153662644 153662684 41 AGTTACAATGACACCGCTCCCCGGATCCTGTTCTGGGCCCA AGTTACAATGACACCGCTCCCCGAATCCTGTTCTGGGCCCA < 41bp 0.748688289202621 0.52078066307446 0.7998639 0.35713765 prediction 0.455815252256321 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153662664 chrX:153662667 synonymous SNV . 0 24 hm5C_associated_SNPs_76412 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chrX:153662659-153662685
64251 chr20 49576416 49576416 1 + A T KIRC 49576412 + 49576392 49576432 41 TCACCGACTATAAGCGACTGCTGGATTCTGGGGCATTCCAC TCACCGACTATAAGCGACTGCTGGTTTCTGGGGCATTCCAC < 41bp 0.877656186089844 0.649752315625014 0.3652242 0.06780425 prediction 0.455807740929661 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576412 chr20:49576416 nonsynonymous SNV 0.963 2 25 hm5C_associated_SNPs_76413 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:49576385-49576434
64251 chr12 112915738 112915738 1 + G A STAD 112915735 + 112915715 112915755 41 ACACAAGGCTGCCTGCAAAACACGGTGAATGACTTTTGGCG ACACAAGGCTGCCTGCAAAACACAGTGAATGACTTTTGGCG < 41bp 0.752594584439261 0.524693697332669 0.2822591 0.14308453 prediction 0.455801774213183 Functional Loss - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915735 chr12:112915738 synonymous SNV . 0 24 hm5C_associated_SNPs_76415 1 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr12:112915708-112915817
64251 chr15 65903882 65903882 1 + G A rs62013112 65903879 + 65903859 65903899 41 TCCCCTGGGCCCCGTCGGTGCACGAGCCCAACCCTTCCTGC TCCCCTGGGCCCCGTCGGTGCACAAGCCCAACCCTTCCTGC < 41bp 0.727900079786761 0.499407508626699 0.31329447 0.18140823 prediction 0.455800159573521 Functional Loss - SLC24A1 ENSG00000074621 UTR5 Human protein_coding chr15:65903879 chr15:65903882 . . 0 24 hm5C_associated_SNPs_76416 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:65903856-65903899
64251 chr16 31501829 31501829 1 - C T COAD 31501832 - 31501812 31501852 41 GCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATGAG GCATAGAAGCCCCAGAGGAACACAGCCACTGCCATCATGAG < 41bp 0.785582154009713 0.557682430739371 0.085048884 0.054463893 prediction 0.455799446540683 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501832 chr16:31501829 synonymous SNV . 0 24 hm5C_associated_SNPs_76418 0 0 2 UPF1 POSTAR2 ENCODE chr16:31501807-31501870
64251 chr8 133844569 133844569 1 + C T UCEC 133844567 + 133844547 133844587 41 TTCTGGGAGTTCTCTGGCTTCACGAAGCATGTTTACGGAGA TTCTGGGAGTTCTCTGGCTTCATGAAGCATGTTTACGGAGA < 41bp 0.857169739367758 0.629280878215077 0.09780601 0.12269232 prediction 0.455777722305362 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133844567 chr8:133844569 stopgain 0.892 0 23 hm5C_associated_SNPs_76424 0 0 3 GRWD1 POSTAR2 ENCODE chr8:133844481-133844652
64251 chr12 6952179 6952179 1 + C T HNSC 6952177 + 6952157 6952197 41 GGGACGAGTCCAGATGCGGACGCGGCGGACGTTAAGGGGAC GGGACGAGTCCAGATGCGGACGTGGCGGACGTTAAGGGGAC < 41bp 0.827785451577227 0.599898846397507 0.75078183 0.778268 prediction 0.455773210359439 Functional Loss - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6952177 chr12:6952179 nonsynonymous SNV 0.933 4 23 hm5C_associated_SNPs_76425 0 0 1 PPIG POSTAR2 ENCODE chr12:6952133-6952245
64251 chr4 74319582 74319582 1 + G A SKCM 74319579 + 74319559 74319599 41 GCCTGTTGGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTC GCCTGTTGGAGAAATGCTGCCAAAGCCAGGAACAGGAAGTC < 41bp 0.74914140785996 0.521254903667503 0.16938734 0.20958495 prediction 0.455773008384914 Functional Loss - AFP ENSG00000081051 CDS Human protein_coding chr4:74319579 chr4:74319582 nonsynonymous SNV 0.017 0 24 hm5C_associated_SNPs_76426 0 0 2 RPS3 POSTAR2 ENCODE chr4:74319540-74319582
64251 chrX 48557334 48557334 1 + G A UCEC 48557331 + 48557311 48557351 41 AGTCTTCTTGGAATCAGCTGCAGGACCTGTGCCGCCTGGCC AGTCTTCTTGGAATCAGCTGCAGAACCTGTGCCGCCTGGCC < 41bp 0.727884238901144 0.481506533122623 0.8551014 0.61258775 prediction 0.455768477802288 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48557331 chrX:48557334 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76427 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:48557300-48557340
64251 chr12 57921343 57921343 1 + G A UCEC 57921340 + 57921320 57921360 41 CCACCTACCTCCAGTGTCACCACGGCAACTACTGACCCGGG CCACCTACCTCCAGTGTCACCACAGCAACTACTGACCCGGG < 41bp 0.768811252454378 0.540929238408535 0.37551332 0.32023144 prediction 0.455764028091686 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921340 chr12:57921343 synonymous SNV . 0 24 hm5C_associated_SNPs_76428 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:57921340-57921360
64251 chr12 16109906 16109906 1 + C T PRAD 16109904 + 16109884 16109924 41 TCCAAAATACAAGTGAATCACCCGGCAGTTCTGAGGCGTGC TCCAAAATACAAGTGAATCACCTGGCAGTTCTGAGGCGTGC < 41bp 0.727882001219971 0.455515278146078 0.32271665 0.30421638 prediction 0.455764002439942 Functional Loss - DERA ENSG00000023697 CDS Human protein_coding chr12:16109904 chr12:16109906 nonsynonymous SNV 0.567 1 23 hm5C_associated_SNPs_76429 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr12:16109898-16109918
64251 chrX 47041209 47041209 1 + G T LUSC 47041206 + 47041186 47041226 41 GCTCCAGAGCCCTACCCATCCTAGTTCTGCTCTCCCACCGG GCTCCAGAGCCCTACCCATCCTATTTCTGCTCTCCCACCGG < 41bp 0.727881740434954 0.324583551147491 0.28277022 0.18724328 prediction 0.455763480869909 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47041206 chrX:47041209 nonsynonymous SNV 0.938 3 24 hm5C_associated_SNPs_76430 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:47041200-47041220
64251 chr7 128450358 128450358 1 + G A SARC 128450355 + 128450335 128450375 41 GTTTCAAAGAGTCTCATTTCCAGGAAGTGTTGGAGAATCCC GTTTCAAAGAGTCTCATTTCCAGAAAGTGTTGGAGAATCCC < 41bp 0.733379626123231 0.505514548046107 0.18996936 0.11695945 prediction 0.455730156154248 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128450355 chr7:128450358 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_76436 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:128450340-128450360
64251 chr3 14708374 14708374 1 + G C BRCA 14708373 + 14708353 14708393 41 ATATGAGAAAAGAACTTCAGCGCCAGCAATGGGAGGAAGAA ATATGAGAAAAGAACTTCAGCCCCAGCAATGGGAGGAAGAA < 41bp 0.727863391698669 0.418451815374488 0.09654969 0.025611341 prediction 0.455726783397337 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14708373 chr3:14708374 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_76438 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:14708345-14708377
64251 chr22 30090765 30090765 1 + C T COAD 30090763 + 30090743 30090783 41 CACCTTGCAGAGCGCCAAGTCCCGAGTGGCCTTCTTTGAAG CACCTTGCAGAGCGCCAAGTCCTGAGTGGCCTTCTTTGAAG < 41bp 0.808494739650011 0.580634033091944 0.13143778 0.12027368 prediction 0.455721413116133 Functional Loss - NF2 ENSG00000186575 CDS Human protein_coding chr22:30090763 chr22:30090765 stopgain 0.998 0 23 hm5C_associated_SNPs_76440 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:30090746-30090773
64251 chr12 69980090 69980090 1 + G T UCEC 69980087 + 69980067 69980107 41 ACCTGTTAACATCTTTAAGGCAGGAGCTGATGAAGAGAGAG ACCTGTTAACATCTTTAAGGCAGTAGCTGATGAAGAGAGAG < 41bp 0.727857370854487 0.412536160563395 0.15415385 0.110836774 prediction 0.455714741708974 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69980087 chr12:69980090 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_76442 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:69980053-69980091
64251 chr9 139309052 139309052 1 + C T UCEC 139309050 + 139309030 139309070 41 GCTGATAGCAAAGGCTTGGACACGGTGGTTGCCTTACTGGC GCTGATAGCAAAGGCTTGGACATGGTGGTTGCCTTACTGGC < 41bp 0.800286554942146 0.572440058613559 0.4640755 0.4444214 prediction 0.455692992657173 Functional Loss - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139309050 chr9:139309052 nonsynonymous SNV 0.958 3 23 hm5C_associated_SNPs_76449 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139309048-139309071
64251 chr4 1801486 1801486 1 + C T HNSC 1801484 + 1801464 1801504 41 TGCCTTGCAGACGCTCCATCCTCGGGAGATGACGAAGACGG TGCCTTGCAGACGCTCCATCCTTGGGAGATGACGAAGACGG < 41bp 0.727840859729666 0.461397647684671 0.09359014 0.07770452 prediction 0.455681719459332 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1801484 chr4:1801486 nonsynonymous SNV 0.818 4 23 hm5C_associated_SNPs_76454 0 0 5 BUD13 POSTAR2 ENCODE chr4:1801479-1801536
64251 chr16 1797222 1797222 1 + G A STAD 1797219 + 1797199 1797239 41 GCAAGCGTGCCCGGGAGAAGCGCGACAGCCGCAACATGGAA GCAAGCGTGCCCGGGAGAAGCGCAACAGCCGCAACATGGAA < 41bp 0.76845199982062 0.540614034019937 0.3849492 0.29448217 prediction 0.455675931601366 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1797219 chr16:1797222 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_76455 0 0 6 BUD13 POSTAR2 ENCODE chr16:1797218-1797262
64251 chr16 30016683 30016683 1 + C T BLCA 30016681 + 30016661 30016701 41 CACGATCCTGAGCACGGTCCCTCGGCAGATGTTCAGCGATG CACGATCCTGAGCACGGTCCCTTGGCAGATGTTCAGCGATG < 41bp 0.804203087671869 0.576374632983981 0.024458438 0.026774138 prediction 0.455656909375777 Functional Loss - INO80E ENSG00000169592 CDS Human protein_coding chr16:30016681 chr16:30016683 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_76461 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30016661-30016689
64251 chr19 17887474 17887474 1 + G A rs139750085 17887471 + 17887451 17887491 41 TGCTGGGAAACCCCAGAGACCTCGGTCTGCCCCCAGAACCA TGCTGGGAAACCCCAGAGACCTCAGTCTGCCCCCAGAACCA < 41bp 0.727819408468358 0.472300101796169 0.38694102 0.25423378 prediction 0.455638816936717 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887471 chr19:17887474 nonsynonymous SNV 0.816 0 24 hm5C_associated_SNPs_76465 0 0 2 SF3B4 POSTAR2 ENCODE chr19:17887388-17887504
64251 chr1 110587643 110587643 1 + G A OV 110587640 + 110587620 110587660 41 CCTTCTTTATTCTCCAGTGACACGAACACAGTGGTGGGGCT CCTTCTTTATTCTCCAGTGACACAAACACAGTGGTGGGGCT < 41bp 0.756618127009951 0.528801159610297 0.35001925 0.14325038 prediction 0.455633934799307 Functional Loss - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110587640 chr1:110587643 synonymous SNV . 0 24 hm5C_associated_SNPs_76466 0 0 2 BUD13 POSTAR2 ENCODE chr1:110587637-110587656
64251 chr8 55060079 55060079 1 + G A BLCA 55060076 + 55060056 55060096 41 TGGCGGATCCTGCCAAATTTCCTGAAGCACGACTTGAACTC TGGCGGATCCTGCCAAATTTCCTAAAGCACGACTTGAACTC < 41bp 0.727816850367679 0.498486950791221 0.2840438 0.153209 prediction 0.455633700735358 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060076 chr8:55060079 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76467 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55060020-55060100
64251 chr17 73489821 73489821 1 + G A SKCM 73489818 + 73489798 73489838 41 CTACCAGCGAGCCTGCCTGTCTGGGTATTGCTCTGCCTTCG CTACCAGCGAGCCTGCCTGTCTGAGTATTGCTCTGCCTTCG < 41bp 0.786049449162178 0.558237194746752 0.8832911 0.40055254 prediction 0.455624508830851 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73489818 chr17:73489821 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_76470 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr17:73489796-73489822
64251 chr5 167944883 167944883 1 + G T UCEC 167944880 + 167944860 167944900 41 CAAAAAGCTGCTCGAGAAACCAAGATTCTTTTGGATCATGA CAAAAAGCTGCTCGAGAAACCAATATTCTTTTGGATCATGA < 41bp 0.727806403712036 0.347224193641199 0.46235907 0.40828645 prediction 0.455612807424073 Functional Loss - RARS ENSG00000113643 CDS Human protein_coding chr5:167944880 chr5:167944883 nonsynonymous SNV 0.955 0 24 hm5C_associated_SNPs_76473 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167944840-167944989
64251 chr22 18607010 18607010 1 + G A STAD 18607007 + 18606987 18607027 41 GGATGCAGCCAACAACTATGCCCGGGGCCACTACACGGTGG GGATGCAGCCAACAACTATGCCCAGGGCCACTACACGGTGG < 41bp 0.790183783421315 0.5623787414961 0.5715436 0.30871302 prediction 0.45561008385043 Functional Loss - TUBA8 ENSG00000183785 CDS Human protein_coding chr22:18607007 chr22:18607010 nonsynonymous SNV 0.949 4 24 hm5C_associated_SNPs_76475 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:18606994-18607023
64251 chr11 10518462 10518462 1 + G A THCA 10518459 + 10518439 10518479 41 CTATCAACCCCCAAGATCATCGAGAGCTTCACCTCTTCCTT CTATCAACCCCCAAGATCATCGAAAGCTTCACCTCTTCCTT < 41bp 0.785022284261076 0.557223666282365 0.8696028 0.48553878 prediction 0.455597235957422 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10518459 chr11:10518462 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_76476 0 0 1 ZNF622 POSTAR2 ENCODE chr11:10518409-10518478
64251 chr16 30764558 30764558 1 + G C LUSC 30764557 + 30764537 30764577 41 CCCCTCCTTCCCTTAGGATGCGGAAGGGAGAGCTGTTTGAC CCCCTCCTTCCCTTAGGATGCCGAAGGGAGAGCTGTTTGAC < 41bp 0.727797755392816 0.393274591023803 0.8839817 0.5088614 prediction 0.455595510785632 Functional Loss - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30764557 chr16:30764558 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_76479 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:30764520-30764560
64251 chr20 42089160 42089160 1 + G A BLCA 42089157 + 42089137 42089177 41 TTGTTTTTCTCCTAATAGGTCTCGATCTAGAAGACGGTCAC TTGTTTTTCTCCTAATAGGTCTCAATCTAGAAGACGGTCAC < 41bp 0.743069153631805 0.515274537229138 0.100836664 0.06760839 prediction 0.455589232805334 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089157 chr20:42089160 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_76481 0 0 12 U2AF2 POSTAR2 GSE83923,CSM2221659 chr20:42089140-42089160
64251 chr13 80113872 80113872 1 + G T STAD 80113870 + 80113850 80113890 41 TTCAGTGATGCAGACCAGCTCAGAGTGGGGAATGATGGCAT TTCAGTGATGCAGACCAGCTCATAGTGGGGAATGATGGCAT < 41bp 0.727792398075134 0.386872255280682 0.888714 0.78944683 prediction 0.455584796150267 Functional Loss - NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80113870 chr13:80113872 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_76483 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:80113844-80113872
64251 chr6 31939963 31939963 1 - C G BRCA 31939964 - 31939944 31939984 41 CTCCGCCAGGCCGGGCCCCACGCCGGCCGCGGATTGGCTCC CTCCGCCAGGCCGGGCCCCACCCCGGCCGCGGATTGGCTCC < 41bp 0.72778288662727 0.467902745776808 0.22735181 0.20644796 prediction 0.45556577325454 Functional Loss - STK19 ENSG00000204344 CDS Human protein_coding chr6:31939964 chr6:31939963 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_76489 0 0 1 NCBP2 POSTAR2 ENCODE chr6:31939833-31940026
64251 chr6 2770469 2770469 1 + T C UCEC 2770468 + 2770448 2770488 41 GCCGCTGTCGAGTGATTGTTCTTGAGAAGCTTCCAGTAGAG GCCGCTGTCGAGTGATTGTTCCTGAGAAGCTTCCAGTAGAG < 41bp 0.813893258004358 0.58611499812482 0.14041004 0.20287368 prediction 0.455556519759078 Functional Loss - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2770468 chr6:2770469 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_76493 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr6:2770429-2770471
64251 chr1 179064186 179064186 1 + G A PCPG 179064183 + 179064163 179064203 41 TCCTGCCTTTGGAGTACCGTCACGTGAGGCTGTGTGCACGG TCCTGCCTTTGGAGTACCGTCACATGAGGCTGTGTGCACGG < 41bp 0.741121834605001 0.513347434843057 0.44282842 0.6007328 prediction 0.455548799523889 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179064183 chr1:179064186 nonsynonymous SNV 0.967 4 24 hm5C_associated_SNPs_76494 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:179064138-179064188
64251 chr16 4431830 4431830 1 + G A COAD 4431827 + 4431807 4431847 41 GCCCCTGGGTGCGCGAGAGCCACGTCACACTGGCCAGCCCT GCCCCTGGGTGCGCGAGAGCCACATCACACTGGCCAGCCCT < 41bp 0.779748901793215 0.55197847413439 0.1884112 0.07301456 prediction 0.455540855317651 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4431827 chr16:4431830 nonsynonymous SNV 0.020 0 24 hm5C_associated_SNPs_76497 0 0 1 DDX6 POSTAR2 ENCODE chr16:4431761-4431842
64251 chr12 49743212 49743212 1 + G C rs144310855 49743208 + 49743188 49743228 41 TCAGTGTGCGGCTCTATCGTCTGGGCTTGGCTTACCTTGCT TCAGTGTGCGGCTCTATCGTCTGGCCTTGGCTTACCTTGCT < 41bp 0.864730783294152 0.636971570083142 0.8222685 0.589761 prediction 0.45551842642202 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49743208 chr12:49743212 nonsynonymous SNV 0.963 2 25 hm5C_associated_SNPs_76502 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:49743193-49743239
64251 chr4 727556 727556 1 + G A rs35762433 727553 + 727533 727573 41 GGGTACCTCATCGACGCCACCACGGTGACCGAGTGTCTGCA GGGTACCTCATCGACGCCACCACAGTGACCGAGTGTCTGCA < 41bp 0.731958329386913 0.504203561797366 0.18331915 0.060044944 prediction 0.455509535179095 Functional Loss - PCGF3 ENSG00000185619 CDS Human protein_coding chr4:727553 chr4:727556 synonymous SNV . 0 24 hm5C_associated_SNPs_76503 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:727553-727578
64251 chr8 15519781 15519781 1 + G T COAD 15519778 + 15519758 15519798 41 AACTTGGAGTTCATCTATAACAAGACTGGTTGGGCCATGGT AACTTGGAGTTCATCTATAACAATACTGGTTGGGCCATGGT < 41bp 0.7277518389612 0.347382949353029 0.47217238 0.23879883 prediction 0.4555036779224 Functional Loss - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15519778 chr8:15519781 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_76505 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:15519766-15519788
64251 chr17 17697397 17697397 1 + A T LUSC 17697393 + 17697373 17697413 41 CCCTACAGCCAGCAGCCGCTCAGCACCGGGGCCTTCCCCGC CCCTACAGCCAGCAGCCGCTCAGCTCCGGGGCCTTCCCCGC < 41bp 0.727743892499451 0.391940168731717 0.19895789 0.17997324 prediction 0.455487784998902 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697393 chr17:17697397 nonsynonymous SNV 0.078 1 25 hm5C_associated_SNPs_76507 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697396-17697417
64251 chr3 14523294 14523294 1 + G T SARC 14523292 + 14523272 14523312 41 CTGGCCCTTTCCTCCATGCTCTGCGTTCCCTTGGTCATCGT CTGGCCCTTTCCTCCATGCTCTTCGTTCCCTTGGTCATCGT < 41bp 0.727738890582287 0.380666377069463 0.10976687 0.078222126 prediction 0.455477781164575 Functional Loss - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14523292 chr3:14523294 nonsynonymous SNV 0.554 1 23 hm5C_associated_SNPs_76511 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:14523251-14523310
64251 chr22 20908732 20908732 1 + A C rs634622 20908731 + 20908711 20908751 41 TGGCATGGTGGCCCTGCACACAGGGGCCCAGGCTGAGTTGG TGGCATGGTGGCCCTGCACACCGGGGCCCAGGCTGAGTTGG < 41bp 0.732600480360311 0.5048687097577 0.9302701 0.9010519 prediction 0.455463541205222 Functional Loss - MED15 ENSG00000099917 intronic Human protein_coding chr22:20908731 chr22:20908732 . . 0 22 hm5C_associated_SNPs_76515 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:20908731-20908754
64251 chr7 100212577 100212577 1 + C T COAD 100212575 + 100212555 100212595 41 GCCTTCCTGCTGCTCCCACTCCCGGACGAACTCGGCAGCCA GCCTTCCTGCTGCTCCCACTCCTGGACGAACTCGGCAGCCA < 41bp 0.826398679002889 0.59867415871221 0.2912026 0.30960548 prediction 0.455449040581358 Functional Loss - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100212575 chr7:100212577 nonsynonymous SNV 0.540 0 23 hm5C_associated_SNPs_76516 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:100212576-100212614
64251 chr17 79974973 79974973 1 + G A rs74795907 79974970 + 79974950 79974990 41 AGGAGCCTGGGCAAGGTGCCCAAGTGGCTGAAGCTGCCGGG AGGAGCCTGGGCAAGGTGCCCAAATGGCTGAAGCTGCCGGG < 41bp 0.758634362933093 0.530910357480499 0.671057 0.48842704 prediction 0.455448010905188 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79974970 chr17:79974973 synonymous SNV . 0 24 hm5C_associated_SNPs_76517 0 0 9 DDX55 POSTAR2 ENCODE chr17:79974919-79974989
64251 chr16 4431012 4431012 1 + C T UCEC 4431010 + 4430990 4431030 41 TGCACTGCCCGCCAGGGGACCACGGTGCCCCGAGACGTGCC TGCACTGCCCGCCAGGGGACCATGGTGCCCCGAGACGTGCC < 41bp 0.727723805131175 0.4904667158964 0.52320707 0.2674686 prediction 0.455447610262349 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4431010 chr16:4431012 nonsynonymous SNV 0.677 2 23 hm5C_associated_SNPs_76519 0 0 1 DDX3X POSTAR2 ENCODE chr16:4430998-4431032
64251 chrX 12809712 12809712 1 + G C BLCA 12809711 + 12809691 12809731 41 GGAGCTGGGCAAGGTGGTCACGAAGAAGTTCAGCAACCAGG GGAGCTGGGCAAGGTGGTCACCAAGAAGTTCAGCAACCAGG < 41bp 0.86831301464825 0.640600185657008 0.6997168 0.06155753 prediction 0.455425657982483 Functional Loss - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12809711 chrX:12809712 synonymous SNV . 0 22 hm5C_associated_SNPs_76527 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:12809677-12809712
64251 chr21 45563112 45563112 1 + G T LUAD 45563109 + 45563089 45563129 41 TGTGCTGCATTGCACCTGTCCTCGCGGCCAAGGTGCTCAGA TGTGCTGCATTGCACCTGTCCTCTCGGCCAAGGTGCTCAGA < 41bp 0.727702971528415 0.32233018680776 0.5533923 0.19500446 prediction 0.45540594305683 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45563109 chr21:45563112 nonsynonymous SNV 0.241 4 24 hm5C_associated_SNPs_76537 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45563072-45563157
64251 chr20 60963205 60963205 1 + G C rs148454502 60963201 + 60963181 60963221 41 CCCCCCCGACCCCGCTCCACCATAGTCAGGCTGCAGGCTGC CCCCCCCGACCCCGCTCCACCATACTCAGGCTGCAGGCTGC < 41bp 0.727699419073357 0.439383160236755 0.226758 0.11571801 prediction 0.455398838146714 Functional Loss - RPS21 ENSG00000171858 UTR3 Human protein_coding chr20:60963201 chr20:60963205 . . 0 25 hm5C_associated_SNPs_76540 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:60963175-60963229
64251 chr16 81053826 81053826 1 + C T COAD 81053823 + 81053803 81053843 41 CGTGGTGTACTACTCCCAGACTCCGTACGCCTTCACGTCCT CGTGGTGTACTACTCCCAGACTCTGTACGCCTTCACGTCCT < 41bp 0.753435747699983 0.525737457917762 0.54633015 0.05318457 prediction 0.455396579564443 Functional Loss - CENPN ENSG00000166451 CDS Human protein_coding chr16:81053823 chr16:81053826 nonsynonymous SNV 0.106 3 24 hm5C_associated_SNPs_76542 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:81053814-81053828
64251 chr22 35811830 35811830 1 + G A rs188820496 35811827 + 35811807 35811847 41 ACCCCACTGCCCCAGGTATACACGTCTGGGAAAGGCAGCAG ACCCCACTGCCCCAGGTATACACATCTGGGAAAGGCAGCAG < 41bp 0.756734519700779 0.529038804381197 0.31619334 0.15446642 prediction 0.455391430639164 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35811827 chr22:35811830 synonymous SNV . 0 24 hm5C_associated_SNPs_76544 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:35811830-35811849
64251 chr6 5086072 5086072 1 + A C rs34969826 5086071 + 5086051 5086091 41 GCGAGGGGGCGGAGGACGCACAGCTCGGCCCGGGCGGCTGC GCGAGGGGGCGGAGGACGCACCGCTCGGCCCGGGCGGCTGC < 41bp 0.78406971356522 0.556377918458704 0.41429836 0.43586743 prediction 0.455383590213031 Functional Loss - PPP1R3G ENSG00000219607 CDS Human protein_coding chr6:5086071 chr6:5086072 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_76547 0 0 1 RBM22 POSTAR2 ENCODE chr6:5086037-5086144
64251 chr12 72179411 72179411 1 + T C rs34468898 72179410 + 72179390 72179430 41 ACAGATTATTGATGATGAACCTCAAGCCCAGACCAGTGGTG ACAGATTATTGATGATGAACCCCAAGCCCAGACCAGTGGTG < 41bp 0.781531672187173 0.553843591947514 0.24020165 0.15940857 prediction 0.455376160479317 Functional Loss - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72179410 chr12:72179411 synonymous SNV . 0 22 hm5C_associated_SNPs_76549 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:72179306-72179465
64251 chr6 43581993 43581993 1 + T C UCEC 43581992 + 43581972 43582012 41 CTTCAGCTTCCAAATCTGTGCTGGAGGTGACTCAGAAAGCA CTTCAGCTTCCAAATCTGTGCCGGAGGTGACTCAGAAAGCA < 41bp 0.734558833610306 0.506873444517336 0.30717543 0.7016519 prediction 0.455370778185942 Functional Loss - POLH ENSG00000170734 CDS Human protein_coding chr6:43581992 chr6:43581993 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_76552 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:43581983-43582006
64251 chr3 51979064 51979064 1 + G T UCEC 51979061 + 51979041 51979081 41 TGAGCAAGCAACAGATTGCACGGGGTTTCGAGGCCTTGGAG TGAGCAAGCAACAGATTGCACGGTGTTTCGAGGCCTTGGAG < 41bp 0.931594932694211 0.703915424073636 0.9252962 0.8489635 prediction 0.45535901724115 Functional Loss - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51979061 chr3:51979064 nonsynonymous SNV 0.264 4 24 hm5C_associated_SNPs_76556 0 0 2 PPIG POSTAR2 ENCODE chr3:51979055-51979123
64251 chr14 55529570 55529570 1 + C T SKCM 55529568 + 55529548 55529588 41 CACCGGACCACCTCCAGGACCCCCAGCACCCTTTCCTCCTT CACCGGACCACCTCCAGGACCCTCAGCACCCTTTCCTCCTT < 41bp 0.727674035355633 0.433219994266634 0.053537637 0.1236583 prediction 0.455348070711266 Functional Loss - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529568 chr14:55529570 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_76560 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:55529500-55529620
64251 chrX 30738986 30738986 1 + G A SKCM 30738983 + 30738963 30739003 41 CCTCAGTGAAGCCCTCAATGCCCGAAACCACTGCACTGGGT CCTCAGTGAAGCCCTCAATGCCCAAAACCACTGCACTGGGT < 41bp 0.739189254445175 0.511518157223312 0.16928655 0.092941135 prediction 0.455342194443726 Functional Loss - GK ENSG00000198814 CDS Human protein_coding chrX:30738983 chrX:30738986 nonsynonymous SNV 0.970 4 24 hm5C_associated_SNPs_76563 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:30738966-30739009
64251 chr4 99966411 99966411 1 + G A UCEC 99966408 + 99966388 99966428 41 TGGAGAAGTGGATGATGGAGCACGGAAACTTGTTCAGACCA TGGAGAAGTGGATGATGGAGCACAGAAACTTGTTCAGACCA < 41bp 0.758194437630762 0.530523723539014 0.27730262 0.13425076 prediction 0.455341428183497 Functional Loss - METAP1 ENSG00000164024 CDS Human protein_coding chr4:99966408 chr4:99966411 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_76564 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:99966359-99966422
64251 chr2 177017717 177017717 1 + G T SARC 177017715 + 177017695 177017735 41 TCCCTGCGCACCAGGCTGAGCCGAAGCTGCGGGGGCAGGCC TCCCTGCGCACCAGGCTGAGCCTAAGCTGCGGGGGCAGGCC < 41bp 0.72767054256842 0.395389467813319 0.65520346 0.18350881 prediction 0.45534108513684 Functional Loss - HOXD4 ENSG00000128652;ENSG00000170166 UTR5;UTR3 Human other chr2:177017715 chr2:177017717 . . 0 23 hm5C_associated_SNPs_76565 0 0 1 DGCR8 POSTAR2 ENCODE chr2:177017705-177017741
64251 chr3 52570868 52570868 1 + G A UCEC 52570865 + 52570845 52570885 41 TCCTGCCCTTCTTTTTTGTCCTGGGAGGAACGATGGAGTGG TCCTGCCCTTCTTTTTTGTCCTGAGAGGAACGATGGAGTGG < 41bp 0.777604737254558 0.549940321439163 0.40708512 0.19563499 prediction 0.455328831630791 Functional Loss - SMIM4 ENSG00000168273 CDS Human protein_coding chr3:52570865 chr3:52570868 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_76567 0 0 12 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:52570849-52570871
64251 chr12 120650309 120650309 1 + G A LUAD 120650306 + 120650286 120650326 41 GAACACAGCGAGCCGCGCCGCTCGTGGTAGTGCACCTCACA GAACACAGCGAGCCGCGCCGCTCATGGTAGTGCACCTCACA < 41bp 0.727659854379731 0.494363542169779 0.31216758 0.26606768 prediction 0.455319708759462 Functional Loss - PXN ENSG00000089159 CDS Human protein_coding chr12:120650306 chr12:120650309 synonymous SNV . 0 24 hm5C_associated_SNPs_76570 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:120650267-120650315
64251 chr10 116602895 116602895 1 + C T BLCA 116602893 + 116602873 116602913 41 TGTCCACAAGCTTGGATAACCTCAGTGTCACCTCACTGCCA TGTCCACAAGCTTGGATAACCTTAGTGTCACCTCACTGCCA < 41bp 0.727658853658637 0.445168929861417 0.26515448 0.24881709 prediction 0.455317707317273 Functional Loss - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116602893 chr10:116602895 synonymous SNV . 0 23 hm5C_associated_SNPs_76571 0 0 5 GRWD1 POSTAR2 ENCODE chr10:116602795-116602935
64251 chr7 6634101 6634101 1 + G A COAD 6634098 + 6634078 6634118 41 GTTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATGACTA GTTTACTGTGTGAGGTTAGCCAAAGCCCTTGTAGATGACTA < 41bp 0.754465960459085 0.526808434433685 0.38914454 0.36401916 prediction 0.4553150520508 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6634098 chr7:6634101 synonymous SNV . 0 24 hm5C_associated_SNPs_76572 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:6634065-6634117
64251 chr20 18296671 18296671 1 + G T OV 18296668 + 18296648 18296688 41 AAGGAGTGTGGGCGATGCTTCAGGCAGAGGACCACCCTTGT AAGGAGTGTGGGCGATGCTTCAGTCAGAGGACCACCCTTGT < 41bp 0.727657387922585 0.326242202306897 0.23365566 0.003140211 prediction 0.45531477584517 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296668 chr20:18296671 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_76573 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:18296647-18296680
64251 chr8 11644060 11644060 1 + G A rs527634800 11644057 + 11644037 11644077 41 GATGGGTAAGGGGAAAACTTCCCGGAAGGCAATGGGGCAAG GATGGGTAAGGGGAAAACTTCCCAGAAGGCAATGGGGCAAG < 41bp 0.770908921349964 0.543260205225116 0.4093666 0.1512906 prediction 0.455297432249695 Functional Loss - NEIL2 ENSG00000154328 UTR3 Human protein_coding chr8:11644057 chr8:11644060 . . 0 24 hm5C_associated_SNPs_76577 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:11644034-11644070
64251 chr22 41625657 41625657 1 - G A UCEC 41625659 - 41625639 41625679 41 CCAGCCCGGTGGCTCTTACTCTCGCCAGGAACAGGCTCCGA CCAGCCCGGTGGCTCTTACTCTTGCCAGGAACAGGCTCCGA < 41bp 0.769667533712553 0.542020592342737 0.06072387 0.024386197 prediction 0.455293882739633 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41625659 chr22:41625657 nonsynonymous SNV 0.473 1 23 hm5C_associated_SNPs_76579 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:41625654-41625673
64251 chr20 17956382 17956382 1 + C T UCEC 17956380 + 17956360 17956400 41 CCTTGGAAAGCATACTTTCACCCCAGGAAACCTTAAAAGAG CCTTGGAAAGCATACTTTCACCTCAGGAAACCTTAAAAGAG < 41bp 0.727646764368545 0.452261548930627 0.14395303 0.10700458 prediction 0.455293528737091 Functional Loss - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17956380 chr20:17956382 synonymous SNV . 0 23 hm5C_associated_SNPs_76580 0 0 3 U2AF1 POSTAR2 ENCODE chr20:17956289-17956388
64251 chr11 5632139 5632139 1 + T C UCEC 5632138 + 5632118 5632158 41 AGCATTATGACTGTAGTGTCCTGGGCTCCCAGCACTTCTCC AGCATTATGACTGTAGTGTCCCGGGCTCCCAGCACTTCTCC < 41bp 0.72764649547098 0.496179496656089 0.5229263 0.86139905 prediction 0.455292990941961 Functional Loss - TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632138 chr11:5632139 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_76581 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:5632123-5632162
64251 chr19 42818427 42818427 1 + T C UCEC 42818426 + 42818406 42818446 41 ACTGGGCCCCTTTTTCAGGACTGGGTGTTCCTGACAAGATT ACTGGGCCCCTTTTTCAGGACCGGGTGTTCCTGACAAGATT < 41bp 0.727643657372166 0.485942657821333 0.06961861 0.2876969 prediction 0.455287314744331 Functional Loss - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42818426 chr19:42818427 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_76583 0 0 1 BUD13 POSTAR2 ENCODE chr19:42818411-42818467
64251 chr6 158349730 158349730 1 + G A COAD 158349727 + 158349707 158349747 41 CAGGAGCACTGGAAGCGCTGCACGGGCCGTAAGTCCACTCC CAGGAGCACTGGAAGCGCTGCACAGGCCGTAAGTCCACTCC < 41bp 0.783790177899108 0.556151014894549 0.35821268 0.12935802 prediction 0.455278326009117 Functional Loss - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158349727 chr6:158349730 synonymous SNV . 0 24 hm5C_associated_SNPs_76586 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:158349706-158349731
64251 chr5 68572947 68572947 1 + G T UCEC 68572944 + 68572924 68572964 41 TGCTTCCTAGGAGGATTGCCCAAGAAACTAATTTTTTAAAG TGCTTCCTAGGAGGATTGCCCAATAAACTAATTTTTTAAAG < 41bp 0.727635767701746 0.363082916575951 0.66432524 0.29850715 prediction 0.455271535403492 Functional Loss - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68572944 chr5:68572947 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76589 0 0 1 U2AF2 POSTAR2 ENCODE chr5:68572920-68572964
64251 chr22 44386194 44386194 1 + G A UCEC 44386191 + 44386171 44386211 41 AAGCTGGCTGAGTGCATCCGCTGGTCGTACGGGGCCGGGAT AAGCTGGCTGAGTGCATCCGCTGATCGTACGGGGCCGGGAT < 41bp 0.785255191573698 0.557623190520041 0.1783984 0.09042585 prediction 0.455264002107315 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44386191 chr22:44386194 stopgain 0.969 1 24 hm5C_associated_SNPs_76591 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:44386184-44386207
64251 chr19 17450321 17450321 1 + G A COAD 17450318 + 17450298 17450338 41 GGAGACCCCAGTCGACCTGGCCGGATTTCCTGTGCTGCTGA GGAGACCCCAGTCGACCTGGCCGAATTTCCTGTGCTGCTGA < 41bp 0.727631303928236 0.478891065985973 0.4174479 0.043856382 prediction 0.455262607856472 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450318 chr19:17450321 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_76593 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:17450275-17450328
64251 chr3 69154013 69154013 1 + C T UCEC 69154011 + 69153991 69154031 41 TCCTATTGTGTCTGAAGTTTCACGTGTGTTTATGAAATCTA TCCTATTGTGTCTGAAGTTTCATGTGTGTTTATGAAATCTA < 41bp 0.727630440635131 0.48267027421929 0.08761358 0.104029655 prediction 0.455260881270261 Functional Loss - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69154011 chr3:69154013 nonsynonymous SNV 0.920 0 23 hm5C_associated_SNPs_76594 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:69153899-69154055
64251 chr19 42373177 42373177 1 + G T UCEC 42373175 + 42373155 42373195 41 CCAAGATCTATGGGGGACGTCAGAGAAACGGCGTCATGCCC CCAAGATCTATGGGGGACGTCATAGAAACGGCGTCATGCCC < 41bp 0.72762147935832 0.364604161090053 0.8561182 0.1619071 prediction 0.455242958716641 Functional Loss - RPS19 ENSG00000105372 CDS Human protein_coding chr19:42373175 chr19:42373177 stopgain 1.000 2 23 hm5C_associated_SNPs_76599 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:42373099-42373268
64251 chr12 58002900 58002900 1 + G A HNSC 58002897 + 58002877 58002917 41 CCACCTACCTGACCCGGGTGCAAGAGGAGCTGAGAGCGAAG CCACCTACCTGACCCGGGTGCAAAAGGAGCTGAGAGCGAAG < 41bp 0.727619021222627 0.498464704352852 0.8214106 0.72475725 prediction 0.455238042445254 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002897 chr12:58002900 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76601 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:58002880-58002900
64251 chr2 128183757 128183757 1 + G A COAD 128183754 + 128183734 128183774 41 CCAAGAAGACCAAGTAGATCCGCGGCTCATTGATGGGAAGA CCAAGAAGACCAAGTAGATCCGCAGCTCATTGATGGGAAGA < 41bp 0.727618805594964 0.48465803750256 0.21702337 0.09758082 prediction 0.455237611189929 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128183754 chr2:128183757 nonsynonymous SNV 0.002 3 24 hm5C_associated_SNPs_76602 0 0 7 GRWD1 POSTAR2 ENCODE chr2:128183728-128183757
64251 chrX 24228499 24228499 1 + T C STAD 24228498 + 24228478 24228518 41 AGATAAGTTTACACAACCACCTGGAGAGCCACAAGCTGACC AGATAAGTTTACACAACCACCCGGAGAGCCACAAGCTGACC < 41bp 0.777826292542115 0.5502082159431 0.11228916 0.32666975 prediction 0.455236153198031 Functional Loss - ZFX ENSG00000005889 CDS Human protein_coding chrX:24228498 chrX:24228499 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_76605 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:24228374-24228513
64251 chr22 30069391 30069391 1 + C T UCEC 30069389 + 30069369 30069409 41 ATCAAGGCCACAGCGATTCGCACGGAGGAGGAGAAGCGCCT ATCAAGGCCACAGCGATTCGCATGGAGGAGGAGAAGCGCCT < 41bp 0.72761659542839 0.480642770206908 0.33323407 0.5093385 prediction 0.455233190856779 Functional Loss - NF2 ENSG00000186575 CDS Human protein_coding chr22:30069389 chr22:30069391 nonsynonymous SNV 0.944 3 23 hm5C_associated_SNPs_76607 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:30069374-30069414
64251 chr3 100009461 100009461 1 + G A UCEC 100009458 + 100009438 100009478 41 GGGAGACCATTTCATCTCTTCAGGTTGCTCATCCAATACCA GGGAGACCATTTCATCTCTTCAGATTGCTCATCCAATACCA < 41bp 0.727614340015634 0.488842311134164 0.06363714 0.03242463 prediction 0.455228680031267 Functional Loss - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100009458 chr3:100009461 synonymous SNV . 0 24 hm5C_associated_SNPs_76608 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:100009434-100009468
64251 chr20 60854354 60854354 1 + G A SKCM 60854351 + 60854331 60854371 41 CTCAAGTTCTGGGGCAAAAGCGTGGAGGCGGAGCCCCGAGG CTCAAGTTCTGGGGCAAAAGCGTAGAGGCGGAGCCCCGAGG < 41bp 0.807553064773365 0.579951485612092 0.83671355 0.5622683 prediction 0.455203158322546 Functional Loss - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60854351 chr20:60854354 synonymous SNV . 0 24 hm5C_associated_SNPs_76613 0 0 5 BUD13 POSTAR2 ENCODE chr20:60854334-60854445
64251 chr3 158519984 158519984 1 + G C LUSC 158519983 + 158519963 158520003 41 GCGCGGGCGCTCCTGGCAGGCGGCCCTGACGAGGCCGACAG GCGCGGGCGCTCCTGGCAGGCCGCCCTGACGAGGCCGACAG < 41bp 0.864909215749937 0.637308917620196 0.80034536 0.28368714 prediction 0.455200596259481 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519983 chr3:158519984 nonsynonymous SNV 0.033 0 22 hm5C_associated_SNPs_76615 0 0 3 DDX3X POSTAR2 ENCODE chr3:158519900-158520009
64251 chr1 116929941 116929941 1 + T C UCEC 116929940 + 116929920 116929960 41 CTGCTCGTGCAGCTGAGATCCTGGCGCGAGATGGTCCCAAC CTGCTCGTGCAGCTGAGATCCCGGCGCGAGATGGTCCCAAC < 41bp 0.782260975822356 0.554665868694029 0.66748005 0.80108726 prediction 0.455190214256655 Functional Loss - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116929940 chr1:116929941 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_76616 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:116929914-116929952
64251 chr19 6750571 6750571 1 + G A LUAD 6750568 + 6750548 6750588 41 AGCCAGGACACCCCCATTTACACGGAGTTTGATGAGGATTT AGCCAGGACACCCCCATTTACACAGAGTTTGATGAGGATTT < 41bp 0.727593064263395 0.485155001602539 0.19512734 0.07862669 prediction 0.45518612852679 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750568 chr19:6750571 synonymous SNV . 0 24 hm5C_associated_SNPs_76618 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:6750549-6750571
64251 chr19 56164026 56164026 1 + G A UCEC 56164023 + 56164003 56164043 41 AGTACTCCCGCCGCTGCTTTCTGGCCCTGGACGACGAGACG AGTACTCCCGCCGCTGCTTTCTGACCCTGGACGACGAGACG < 41bp 0.727589353311357 0.491688455916173 0.13266048 0.034175217 prediction 0.455178706622715 Functional Loss - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56164023 chr19:56164026 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_76620 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:56164018-56164043
64251 chr1 40536573 40536573 1 + G T UCEC 40536570 + 40536550 40536590 41 GGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTGTGA GGCTGCCATGCTTACCTGAGCAATAATTCCCTGGATTGTGA < 41bp 0.727588981408765 0.336831187087059 0.664689 0.2585193 prediction 0.455177962817529 Functional Loss - CAP1 ENSG00000131236 CDS Human protein_coding chr1:40536570 chr1:40536573 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76621 0 0 1 PUM2 POSTAR2 ENCODE chr1:40536560-40536602
64251 chr2 99778887 99778887 1 + T C UCS 99778886 + 99778866 99778906 41 CCAAAAGATTTGACCTTTTACTTGATGGACAGTTTAAAATC CCAAAAGATTTGACCTTTTACCTGATGGACAGTTTAAAATC < 41bp 0.791246210832243 0.563657888713285 0.14846766 0.14945942 prediction 0.455176644237915 Functional Loss - LIPT1 ENSG00000144182 CDS Human protein_coding chr2:99778886 chr2:99778887 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_76622 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99778887-99778912
64251 chr2 29169362 29169362 1 + T C UCEC 29169361 + 29169341 29169381 41 TGAAATAGCAGATAAGGATTCTGAAGTGAGTGATTTGTTCC TGAAATAGCAGATAAGGATTCCGAAGTGAGTGATTTGTTCC < 41bp 0.753195322051258 0.525610414365619 0.17346516 0.09076807 prediction 0.455169815371278 Functional Loss - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29169361 chr2:29169362 synonymous SNV . 0 22 hm5C_associated_SNPs_76624 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:29169315-29169388
64251 chr16 721776 721776 1 + G A CESC 721773 + 721753 721793 41 TGCAGAGAGTGTTTGAGAAGCACGACCAGGTGAGAGCATGG TGCAGAGAGTGTTTGAGAAGCACAACCAGGTGAGAGCATGG < 41bp 0.765416235678352 0.537833482741165 0.12068105 0.04422328 prediction 0.455165505874375 Functional Loss - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:721773 chr16:721776 nonsynonymous SNV 0.861 3 24 hm5C_associated_SNPs_76625 0 0 5 DDX24 POSTAR2 ENCODE chr16:721771-721778
64251 chr9 110062451 110062451 1 + T C UCEC 110062450 + 110062430 110062470 41 ACTGAAAGAGAAGATTGAATCTGAAAAGGGGAAAGATGCCT ACTGAAAGAGAAGATTGAATCCGAAAAGGGGAAAGATGCCT < 41bp 0.727580449993759 0.484329679984244 0.06001368 0.06273085 prediction 0.455160899987519 Functional Loss - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110062450 chr9:110062451 synonymous SNV . 0 22 hm5C_associated_SNPs_76626 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:110062420-110062458
64251 chr4 15683492 15683492 1 + G C rs117606668 15683488 + 15683468 15683508 41 GAGAGACCTGAGGCTTGCAGCGCTGGGCCCGGCCGGGTCGC GAGAGACCTGAGGCTTGCAGCGCTCGGCCCGGCCGGGTCGC < 41bp 0.816096858038167 0.588520684389413 0.29392642 0.15685385 prediction 0.455152347297507 Functional Loss - FAM200B ENSG00000237765 UTR5 Human protein_coding chr4:15683488 chr4:15683492 . . 0 25 hm5C_associated_SNPs_76629 0 0 4 DDX3X POSTAR2 ENCODE chr4:15683449-15683546
64251 chr8 22107923 22107923 1 + G A UCEC 22107920 + 22107900 22107940 41 AATTGGCAGGAGCTGGTGTCCGTGGGCCTTGGAGACAGTAG AATTGGCAGGAGCTGGTGTCCGTAGGCCTTGGAGACAGTAG < 41bp 0.735473724506879 0.507903142226606 0.85031474 0.78286076 prediction 0.455141164560546 Functional Loss - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22107920 chr8:22107923 synonymous SNV . 0 24 hm5C_associated_SNPs_76633 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr8:22107905-22107934
64251 chr19 30102791 30102791 1 + C T LUAD 30102788 + 30102768 30102808 41 GATACAGCCTTTTCCTCCCTCTCCATGAACTCTGGAAACAG GATACAGCCTTTTCCTCCCTCTCTATGAACTCTGGAAACAG < 41bp 0.727564380967133 0.485614610728202 0.9616108 0.9052672 prediction 0.455128761934266 Functional Loss - POP4 ENSG00000105171 CDS Human protein_coding chr19:30102788 chr19:30102791 nonsynonymous SNV 0.242 3 24 hm5C_associated_SNPs_76637 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:30102760-30102800
64251 chr3 12574191 12574191 1 + C T UCEC 12574189 + 12574169 12574209 41 TCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAG TCTGAGTCGATGGGTTTCTTCATGAGAGAGGAGTGACCAAG < 41bp 0.819040316000446 0.591477141449353 0.24673912 0.3412809 prediction 0.455126349102185 Functional Loss - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12574189 chr3:12574191 stopgain 0.991 1 23 hm5C_associated_SNPs_76638 0 0 1 U2AF2 POSTAR2 ENCODE chr3:12574146-12574211
64251 chr19 19166730 19166730 1 + G T LUSC 19166727 + 19166707 19166747 41 GAAGGCACACCCGCAGAAGGCCGGCGTGCAGGTGGGCAGGG GAAGGCACACCCGCAGAAGGCCGTCGTGCAGGTGGGCAGGG < 41bp 0.727560088532711 0.335260205554485 0.48839256 0.15766409 prediction 0.455120177065422 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166727 chr19:19166730 nonsynonymous SNV 0.001 3 24 hm5C_associated_SNPs_76639 0 0 2 PRPF8 POSTAR2 ENCODE chr19:19166681-19166803
64251 chr2 47703546 47703546 1 + T C OV 47703545 + 47703525 47703565 41 ATCAACATATATTCGACAAACTGGGGTGATAGTACTCATGG ATCAACATATATTCGACAAACCGGGGTGATAGTACTCATGG < 41bp 0.778603706039009 0.551044356339017 0.8741168 0.92844194 prediction 0.455118699399984 Functional Loss - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47703545 chr2:47703546 synonymous SNV . 0 22 hm5C_associated_SNPs_76641 0 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:47703512-47703549
64251 chr1 55524212 55524212 1 + G A rs146960060 55524209 + 55524189 55524229 41 AGGACTGTATGGTCAGCACACTCGGGGCCTACACGGATGGC AGGACTGTATGGTCAGCACACTCAGGGCCTACACGGATGGC < 41bp 0.801980768998065 0.574421996387624 0.36332953 0.09412107 prediction 0.455117545220882 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55524209 chr1:55524212 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_76642 0 0 10 DDX6 POSTAR2 ENCODE chr1:55524184-55524224
64251 chr11 57457840 57457840 1 + C T BLCA 57457837 + 57457817 57457857 41 ATGTGTGTGGCTGGCTTATTCTTCATCCCTGTAGCTGGCCT ATGTGTGTGGCTGGCTTATTCTTTATCCCTGTAGCTGGCCT < 41bp 0.734030668024365 0.506472239155409 0.20774168 0.13660946 prediction 0.455116857737912 Functional Loss - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57457837 chr11:57457840 synonymous SNV . 0 24 hm5C_associated_SNPs_76643 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr11:57457812-57457841
64251 chr19 8464942 8464942 1 + C T ACC 8464940 + 8464920 8464960 41 CGCTACCGCGCCATCACCTCCGCGTGCGTGTCGGCAGCCTG CGCTACCGCGCCATCACCTCCGTGTGCGTGTCGGCAGCCTG < 41bp 0.727553935550666 0.486646191938078 0.79840136 0.75220525 prediction 0.455107871101332 Functional Loss - RAB11B ENSG00000185236 CDS Human protein_coding chr19:8464940 chr19:8464942 nonsynonymous SNV 0.921 4 23 hm5C_associated_SNPs_76645 0 0 1 AKAP8L POSTAR2 ENCODE chr19:8464872-8464942
64251 chr19 53960302 53960302 1 + G T UCEC 53960299 + 53960279 53960319 41 TTCGCACCTGGCACAACATGCTAGAATTCACACTGGAGAGA TTCGCACCTGGCACAACATGCTATAATTCACACTGGAGAGA < 41bp 0.727553898016484 0.363094108126821 0.097560674 0.06484443 prediction 0.455107796032969 Functional Loss - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53960299 chr19:53960302 . . 0 24 hm5C_associated_SNPs_76646 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:53960255-53960302
64251 chr4 52943136 52943136 1 + C T STAD 52943134 + 52943114 52943154 41 TATTCCCAGGCCCGCCTGGACGCGCAGTGCCTGCTGCGGCG TATTCCCAGGCCCGCCTGGACGTGCAGTGCCTGCTGCGGCG < 41bp 0.834637349993177 0.607085564777292 0.54185313 0.41589242 prediction 0.455103570431769 Functional Loss - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52943134 chr4:52943136 nonsynonymous SNV 0.735 4 23 hm5C_associated_SNPs_76648 0 0 1 GRWD1 POSTAR2 ENCODE chr4:52943079-52943249
64251 chr12 57894252 57894252 1 + C T UCEC 57894250 + 57894230 57894270 41 CTTCTGTGGCTATGAGGAGGCTCGGGGTGACCAGTGTGACA CTTCTGTGGCTATGAGGAGGCTTGGGGTGACCAGTGTGACA < 41bp 0.833087802498077 0.605536234785023 0.65686095 0.7903522 prediction 0.455103135426109 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57894250 chr12:57894252 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_76649 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr12:57894224-57894274
64251 chrX 107169984 107169984 1 + G T CESC 107169982 + 107169962 107170002 41 TCCTCATGGGTCTTCTCTCGCTGCAATAGTAACTTCGTGGT TCCTCATGGGTCTTCTCTCGCTTCAATAGTAACTTCGTGGT < 41bp 0.727543983634503 0.396768842426223 0.10417217 0.036348283 prediction 0.455087967269006 Functional Loss - MID2 ENSG00000080561 CDS Human protein_coding chrX:107169982 chrX:107169984 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_76654 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:107169955-107169986
64251 chr10 103899634 103899634 1 + C T SKCM 103899632 + 103899612 103899652 41 AGCACCAGGTTCCCAGAGAGCTCGAAAGGGCAGGAAGAAGA AGCACCAGGTTCCCAGAGAGCTTGAAAGGGCAGGAAGAAGA < 41bp 0.828681927074421 0.601138442358989 0.10614535 0.08964929 prediction 0.455086969430864 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103899632 chr10:103899634 stopgain 0.984 0 23 hm5C_associated_SNPs_76655 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:103899617-103899648
64251 chr19 8464928 8464928 1 + C T CESC 8464926 + 8464906 8464946 41 CCGCTGGCCAGGAGCGCTACCGCGCCATCACCTCCGCGTGC CCGCTGGCCAGGAGCGCTACCGTGCCATCACCTCCGCGTGC < 41bp 0.787176201406348 0.559636902896204 0.370785 0.32624832 prediction 0.455078597020288 Functional Loss - RAB11B ENSG00000185236 CDS Human protein_coding chr19:8464926 chr19:8464928 synonymous SNV . 0 23 hm5C_associated_SNPs_76656 0 0 3 AKAP8L POSTAR2 ENCODE chr19:8464872-8464942
64251 chr16 66612856 66612856 1 + G A SKCM 66612853 + 66612833 66612873 41 GAAAGGAAGCTTTCCCCCGCCAAGGACGCCTACCCCGAAAC GAAAGGAAGCTTTCCCCCGCCAAAGACGCCTACCCCGAAAC < 41bp 0.771271821820249 0.543732623664372 0.8696826 0.9154712 prediction 0.455078396311754 Functional Loss - CKLF-CMTM1;CMTM1 ENSG00000089505;ENSG00000254788 CDS Human other chr16:66612853 chr16:66612856 synonymous SNV . 0 24 hm5C_associated_SNPs_76657 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:66612829-66612857
64251 chr16 72137913 72137913 1 + G A OV 72137910 + 72137890 72137930 41 TTGATCAAATACATGACTGACGGGATCCTGCTCCGAGAGTC TTGATCAAATACATGACTGACGGAATCCTGCTCCGAGAGTC < 41bp 0.736952281408199 0.509421481304996 0.65070266 0.351739 prediction 0.455061600206406 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72137910 chr16:72137913 synonymous SNV . 0 24 hm5C_associated_SNPs_76660 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:72137904-72137924
64251 chrX 120181920 120181920 1 + T C UCEC 120181919 + 120181899 120181939 41 CCCATCCGGCGCGACGACGGCTCCTGGGAGGTCATCGAAGG CCCATCCGGCGCGACGACGGCCCCTGGGAGGTCATCGAAGG < 41bp 0.727528023194155 0.483652096062811 0.23358357 0.2850466 prediction 0.455056046388311 Functional Loss - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120181919 chrX:120181920 nonsynonymous SNV 0.300 2 22 hm5C_associated_SNPs_76662 0 0 1 RPS3 POSTAR2 ENCODE chrX:120181887-120181981
64251 chr22 50987890 50987890 1 + C T CESC 50987888 + 50987868 50987908 41 ACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAGGCAC ACAGACGCCTGGACCCCACGCGTGCCACTCCCCGCAGGCAC < 41bp 0.743470225759768 0.515950043014049 0.085978806 0.15288395 prediction 0.455040365491438 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987888 chr22:50987890 nonsynonymous SNV 0.060 3 23 hm5C_associated_SNPs_76671 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr15 60678259 60678259 1 - C T COAD 60678262 - 60678242 60678282 41 CCTTCAAAATGTCTACTGTTCACGAAATCCTGTGCAAGCTC CCTTCAAAATGTCTACTGTTCACAAAATCCTGTGCAAGCTC < 41bp 0.741367779942925 0.513852700415628 0.16153765 0.06372723 prediction 0.455030159054595 Functional Loss - ANXA2 ENSG00000182718 CDS Human protein_coding chr15:60678262 chr15:60678259 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_76676 0 0 2 BUD13 POSTAR2 ENCODE chr15:60678192-60678332
64251 chr3 32932948 32932948 1 + G A GBM 32932945 + 32932925 32932965 41 CTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACC CTGGAAGCACTTTGACTCCCCACAGGGTGTGGCCTTCAACC < 41bp 0.72751048314634 0.477232561677548 0.8134967 0.3405251 prediction 0.45502096629268 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932945 chr3:32932948 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_76684 0 0 3 DDX6 POSTAR2 ENCODE chr3:32932912-32932958
64251 chr3 32932947 32932947 1 + C T UCEC 32932945 + 32932925 32932965 41 CTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCAACC CTGGAAGCACTTTGACTCCCCATGGGGTGTGGCCTTCAACC < 41bp 0.72751048314634 0.462683316170637 0.8134967 0.83303416 prediction 0.45502096629268 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932945 chr3:32932947 nonsynonymous SNV 0.951 3 23 hm5C_associated_SNPs_76685 0 0 3 DDX6 POSTAR2 ENCODE chr3:32932912-32932958
64251 chrX 12809648 12809648 1 + C T STAD 12809646 + 12809626 12809666 41 ATCGTGCTGTTCAGCGGCAGCTCGCATCAGGACCTGTCCCA ATCGTGCTGTTCAGCGGCAGCTTGCATCAGGACCTGTCCCA < 41bp 0.79599995112849 0.568494705552508 0.24950337 0.35137933 prediction 0.455010491151964 Functional Loss - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12809646 chrX:12809648 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_76690 0 0 3 GEMIN5 POSTAR2 ENCODE chrX:12809537-12809667
64251 chr19 5119803 5119803 1 + G A CESC 5119800 + 5119780 5119820 41 AGGCTGGGCCGGAGGTTGACCCCGAGGAGGAGGAGGAGGAG AGGCTGGGCCGGAGGTTGACCCCAAGGAGGAGGAGGAGGAG < 41bp 0.7275031189545 0.47684095289067 0.36251813 0.21631116 prediction 0.455006237909 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5119800 chr19:5119803 nonsynonymous SNV 0.905 0 24 hm5C_associated_SNPs_76693 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:5119803-5119804
64251 chr15 90785150 90785150 1 + G A COAD 90785147 + 90785127 90785167 41 TGTTGCCCTCTGTGAGCTGGCTGGGCACCTCCCTGTCAAAA TGTTGCCCTCTGTGAGCTGGCTGAGCACCTCCCTGTCAAAA < 41bp 0.77210110450942 0.54460356399672 0.21529612 0.15494812 prediction 0.454995081025401 Functional Loss - GDPGP1 ENSG00000183208 CDS Human protein_coding chr15:90785147 chr15:90785150 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_76698 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:90785138-90785193
64251 chr15 29409816 29409816 1 + G A rs188719852 29409813 + 29409793 29409833 41 GCTGCCTCTGCCACTGACTGCAGGGACACGGGCAGCCTGGC GCTGCCTCTGCCACTGACTGCAGAGACACGGGCAGCCTGGC < 41bp 0.749257084215055 0.521760319440481 0.90890086 0.88492006 prediction 0.454993529549147 Functional Loss - APBA2 ENSG00000034053 UTR3 Human protein_coding chr15:29409813 chr15:29409816 . . 0 24 hm5C_associated_SNPs_76700 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29409791-29409820
64251 chr2 198318354 198318354 1 + G T SARC 198318352 + 198318332 198318372 41 ATGCCGTCCGAAGTCGGCGACAGCGGCCGGGGCGCAGGCGC ATGCCGTCCGAAGTCGGCGACATCGGCCGGGGCGCAGGCGC < 41bp 0.909675404936637 0.682179359790288 0.7604878 0.45589387 prediction 0.454992090292699 Functional Loss - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198318352 chr2:198318354 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_76701 0 0 2 DDX3X POSTAR2 ENCODE chr2:198318297-198318374
64251 chr16 68961558 68961558 1 + G A LUAD 68961555 + 68961535 68961575 41 CATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTC CATACCCTGATCCGGTCATCCAAAAACTCGCTGTTGATCTC < 41bp 0.754931979314011 0.527448150912385 0.17705315 0.06312242 prediction 0.454967656803253 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68961555 chr16:68961558 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_76712 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:68961535-68961571
64251 chr1 236702362 236702362 1 + G A UCEC 236702359 + 236702339 236702379 41 AGAGAAAAGTCTTTTGAGATCGTGATTATGGTGCTGAAGGA AGAGAAAAGTCTTTTGAGATCGTAATTATGGTGCTGAAGGA < 41bp 0.748257956683906 0.520776610445082 0.2119512 0.08182874 prediction 0.454962692477648 Functional Loss - LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236702359 chr1:236702362 synonymous SNV . 0 24 hm5C_associated_SNPs_76715 0 0 3 BUD13 POSTAR2 ENCODE chr1:236702359-236702441
64251 chr16 3339743 3339743 1 + G T BLCA 3339741 + 3339721 3339761 41 GTGTATGGGTGTGGACTGCACTGAAATCTTTGGTGGGAACC GTGTATGGGTGTGGACTGCACTTAAATCTTTGGTGGGAACC < 41bp 0.727480744189684 0.393920146508588 0.2868858 0.110871166 prediction 0.454961488379368 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339741 chr16:3339743 stopgain 0.062 0 23 hm5C_associated_SNPs_76717 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr16:3339718-3339747
64251 chr16 3339745 3339745 1 + A T UCEC 3339741 + 3339721 3339761 41 GTGTATGGGTGTGGACTGCACTGAAATCTTTGGTGGGAACC GTGTATGGGTGTGGACTGCACTGATATCTTTGGTGGGAACC < 41bp 0.727480744189684 0.406968816761606 0.2868858 0.24605098 prediction 0.454961488379368 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339741 chr16:3339745 nonsynonymous SNV 0.080 0 25 hm5C_associated_SNPs_76718 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr16:3339718-3339747
64251 chr19 51920436 51920436 1 + G A UCEC 51920433 + 51920413 51920453 41 TGTGACTCATCCTGCATCTGCGCGTCTCTGATCACCAAGGA TGTGACTCATCCTGCATCTGCGCATCTCTGATCACCAAGGA < 41bp 0.782794097324993 0.555319065314026 0.06621665 0.06654194 prediction 0.454950064021936 Functional Loss - SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51920433 chr19:51920436 synonymous SNV . 0 24 hm5C_associated_SNPs_76722 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:51920416-51920442
64251 chr12 4412344 4412344 1 + C T rs3217931 4412342 + 4412322 4412362 41 CTTTCCACTCTTCCTGTAGTCCCGAGGCCCCTGGGTCCTTC CTTTCCACTCTTCCTGTAGTCCTGAGGCCCCTGGGTCCTTC < 41bp 0.727473385841028 0.499650008710656 0.03561154 0.035041243 prediction 0.454946771682056 Functional Loss - CCND2 ENSG00000118971 UTR3 Human protein_coding chr12:4412342 chr12:4412344 . . 0 23 hm5C_associated_SNPs_76724 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:4412222-4412363
64251 chr19 49979420 49979420 1 + G T UCEC 49979417 + 49979397 49979437 41 CGCAGTCTGACTACCTGCTTCAAGATTACCCAGTCACCGTG CGCAGTCTGACTACCTGCTTCAATATTACCCAGTCACCGTG < 41bp 0.727469717456499 0.407279918398171 0.256369 0.0693447 prediction 0.454939434912999 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49979417 chr19:49979420 nonsynonymous SNV 0.627 2 24 hm5C_associated_SNPs_76728 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49979420-49979449
64251 chr1 213415603 213415603 1 + C T BLCA 213415601 + 213415581 213415621 41 ATAGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAAC ATAGAGAGGGAATTGTGTGCCGTGATTTGAACCCAAACAAC < 41bp 0.8216577441245 0.594192036523648 0.16651085 0.15554726 prediction 0.454931415201703 Functional Loss - RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213415601 chr1:213415603 synonymous SNV . 0 23 hm5C_associated_SNPs_76729 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:213415582-213415607
64251 chr3 47385140 47385140 1 + G T UCEC 47385137 + 47385117 47385157 41 GGAGCCGCCTCCCTGGGGAGCAAGATGTTTGTCTGCGGGGG GGAGCCGCCTCCCTGGGGAGCAATATGTTTGTCTGCGGGGG < 41bp 0.727460171036567 0.332061627454223 0.82578325 0.25687116 prediction 0.454920342073134 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385137 chr3:47385140 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76732 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:47385140-47385160
64251 chr11 68675672 68675672 1 + T C SKCM 68675671 + 68675651 68675691 41 AGTCAGCTGGCCACTGGGATCTTGACCCGGGTCACCCAGAA AGTCAGCTGGCCACTGGGATCCTGACCCGGGTCACCCAGAA < 41bp 0.727450891117548 0.465551785199307 0.4634337 0.47155714 prediction 0.454901782235096 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68675671 chr11:68675672 synonymous SNV . 0 22 hm5C_associated_SNPs_76736 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68675654-68675676
64251 chr16 28884863 28884863 1 + G A BLCA 28884860 + 28884840 28884880 41 CAGAAGAGGCGTCGAGGGCGCCAGAAGTGGCGGCAGCAGCA CAGAAGAGGCGTCGAGGGCGCCAAAAGTGGCGGCAGCAGCA < 41bp 0.737566267185384 0.510119735709269 0.9054259 0.83290327 prediction 0.45489306295223 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884860 chr16:28884863 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76737 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:28884845-28884872
64251 chr3 9490114 9490114 1 + G A SKCM 9490111 + 9490091 9490131 41 TGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGC TGAATGACAAAGCAGAGAAGCAAAAGTGCCCTGTTGAGTGC < 41bp 0.735233203383866 0.507788242095234 0.8489461 0.31633335 prediction 0.454889922577264 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9490111 chr3:9490114 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_76738 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9490076-9490208
64251 chr2 220044864 220044864 1 + T C UCEC 220044863 + 220044843 220044883 41 GGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTG GGTCAGGCGCCCGGCCGCACCCGCTGAGTGTGCCCGAGTTG < 41bp 0.790895707731398 0.563454135617795 0.25790858 0.11299333 prediction 0.454883144227205 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044863 chr2:220044864 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_76741 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220044851-220044880
64251 chr8 38948831 38948831 1 + G T CESC 38948828 + 38948808 38948848 41 TAGACAGCCGGGGAGTGTTCCTCGACATGTTTCTCCAGTGA TAGACAGCCGGGGAGTGTTCCTCTACATGTTTCTCCAGTGA < 41bp 0.727435679102471 0.350160653401408 0.24901524 0.8572643 prediction 0.454871358204941 Functional Loss - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38948828 chr8:38948831 nonsynonymous SNV 0.172 1 24 hm5C_associated_SNPs_76745 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:38948820-38948840
64251 chr8 38948830 38948830 1 + C T UCEC 38948828 + 38948808 38948848 41 TAGACAGCCGGGGAGTGTTCCTCGACATGTTTCTCCAGTGA TAGACAGCCGGGGAGTGTTCCTTGACATGTTTCTCCAGTGA < 41bp 0.727435679102471 0.425630944635832 0.24901524 0.033205688 prediction 0.454871358204941 Functional Loss - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38948828 chr8:38948830 stopgain 0.223 0 23 hm5C_associated_SNPs_76746 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:38948820-38948840
64251 chr7 872217 872217 1 + C T STAD 872215 + 872195 872235 41 CCCCAGTGTGTGCCGGAGAACACGGGCTACACGTATGCGCT CCCCAGTGTGTGCCGGAGAACATGGGCTACACGTATGCGCT < 41bp 0.784340050242037 0.556908914496607 0.6922128 0.43708205 prediction 0.454862271490861 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:872215 chr7:872217 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_76749 0 0 3 DDX3X POSTAR2 ENCODE chr7:872154-872230
64251 chr19 54656670 54656670 1 + G A UCEC 54656667 + 54656647 54656687 41 CACCAGATGCCACCCCCACACTCGGACACTGTGGAATTCTA CACCAGATGCCACCCCCACACTCAGACACTGTGGAATTCTA < 41bp 0.741835582919127 0.514407951509711 0.099743634 0.093602866 prediction 0.454855262818832 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656667 chr19:54656670 synonymous SNV . 0 24 hm5C_associated_SNPs_76750 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:54656655-54656687
64251 chr19 5133912 5133912 1 + G A SKCM 5133909 + 5133889 5133929 41 TCTAGAGGCATCCCCTTTCTCCGGGGAGGAAGATGTGAGTG TCTAGAGGCATCCCCTTTCTCCGAGGAGGAAGATGTGAGTG < 41bp 0.727422146964305 0.479932491372583 0.92432284 0.89571565 prediction 0.45484429392861 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5133909 chr19:5133912 nonsynonymous SNV 0.358 2 24 hm5C_associated_SNPs_76753 0 0 7 BUD13 POSTAR2 ENCODE chr19:5133886-5133945
64251 chr15 98513938 98513938 1 + G T UCEC 98513935 + 98513915 98513955 41 GTCCTGTGTTTGCCTGTATACAAGAATTCCGGTTTCAACCC GTCCTGTGTTTGCCTGTATACAATAATTCCGGTTTCAACCC < 41bp 0.924536283061623 0.69711487288035 0.2772003 0.10802585 prediction 0.454842820362546 Functional Loss - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98513935 chr15:98513938 stopgain 0.913 1 24 hm5C_associated_SNPs_76754 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:98513938-98513960
64251 chr11 640051 640051 1 + G A rs557382507 640048 + 640028 640068 41 CCGACTGTGCGCCCCCCGCGCCCGGCCTTCCCCGGGGTCCC CCGACTGTGCGCCCCCCGCGCCCAGCCTTCCCCGGGGTCCC < 41bp 0.727412679440132 0.484876441663225 0.4844016 0.33943903 prediction 0.454825358880265 Functional Loss - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640048 chr11:640051 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_76758 0 0 3 AGGF1 POSTAR2 ENCODE chr11:640032-640068
64251 chr15 42841088 42841088 1 + G A rs542482693 42841085 + 42841065 42841105 41 CGAGCCATGGCCGCTGCCAACCCGTGGGACCCGGCGTCCGC CGAGCCATGGCCGCTGCCAACCCATGGGACCCGGCGTCCGC < 41bp 0.771372260876376 0.543961285898217 0.3088262 0.09711805 prediction 0.454821949956319 Functional Loss - HAUS2 ENSG00000137814 CDS Human protein_coding chr15:42841085 chr15:42841088 synonymous SNV . 0 24 hm5C_associated_SNPs_76759 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:42841071-42841092
64251 chr15 64426947 64426947 1 + C T CESC 64426945 + 64426925 64426965 41 GAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACA GAAGAAGCGGGAGGCCGAGGCTTGGCTGCTGTGGGCCAACA < 41bp 0.834238164194241 0.606830095644267 0.655762 0.40803096 prediction 0.45481613709995 Functional Loss - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64426945 chr15:64426947 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_76761 0 0 8 BUD13 POSTAR2 ENCODE chr15:64426930-64427047
64251 chr17 37819263 37819263 1 + C T rs551097184 37819261 + 37819241 37819281 41 ACTGCCCACATGGGACCTGGCCCCAGGCTGTCACCCTCCAC ACTGCCCACATGGGACCTGGCCTCAGGCTGTCACCCTCCAC < 41bp 0.727407603889881 0.480565371385855 0.5006153 0.14658543 prediction 0.454815207779761 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819261 chr17:37819263 nonsynonymous SNV 0.056 1 23 hm5C_associated_SNPs_76762 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:37819242-37819272
64251 chr3 108403149 108403149 1 + G A rs151259123 108403146 + 108403126 108403166 41 CCTCAAATGCCTGCAGTTTGCCCGGGAGTCGTCTCTGCAAC CCTCAAATGCCTGCAGTTTGCCCAGGAGTCGTCTCTGCAAC < 41bp 0.762527161287901 0.535120613546435 0.2681263 0.07491496 prediction 0.454813095482932 Functional Loss - DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108403146 chr3:108403149 synonymous SNV . 0 24 hm5C_associated_SNPs_76763 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:108403132-108403162
64251 chr3 121575953 121575953 1 + C T SKCM 121575950 + 121575930 121575970 41 TCCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGT TCCCAATCTTGTAAAACATTCTCTATCTGAAGATAAGATGT < 41bp 0.746418815117124 0.519016288390093 0.90559435 0.20742282 prediction 0.454805053454063 Functional Loss - EAF2 ENSG00000145088 CDS Human protein_coding chr3:121575950 chr3:121575953 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_76766 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:121575941-121575966
64251 chr1 113933893 113933893 1 + A C UCEC 113933892 + 113933872 113933912 41 GAGGTAAACGGGACGCCTGTCAGCGGGCTCACCAACCGGGA GAGGTAAACGGGACGCCTGTCCGCGGGCTCACCAACCGGGA < 41bp 0.76317438190557 0.535777161728186 0.73374826 0.22734585 prediction 0.454794440354768 Functional Loss - MAGI3 ENSG00000081026 CDS Human protein_coding chr1:113933892 chr1:113933893 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_76769 0 0 1 SRSF1 POSTAR2 ENCODE chr1:113933820-113933941
64251 chr4 95585166 95585166 1 + C T SKCM 95585164 + 95585144 95585184 41 TTGGAAGGTCAGACCTTTTTCTCCAAGAAGGACAAGCCCCT TTGGAAGGTCAGACCTTTTTCTTCAAGAAGGACAAGCCCCT < 41bp 0.727396302616235 0.441405299133632 0.94727194 0.07227725 prediction 0.45479260523247 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95585164 chr4:95585166 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_76770 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr4:95585153-95585198
64251 chr19 50028742 50028742 1 + G A LAML 50028739 + 50028719 50028759 41 CCAGCCAAGTCCTCCGTGCTCGTGGTGGGAATCGTCATCGG CCAGCCAAGTCCTCCGTGCTCGTAGTGGGAATCGTCATCGG < 41bp 0.78283883168119 0.555443601481113 0.911635 0.85909593 prediction 0.454790460400153 Functional Loss - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50028739 chr19:50028742 synonymous SNV . 0 24 hm5C_associated_SNPs_76771 0 0 5 DDX55 POSTAR2 ENCODE chr19:50028732-50028807
64251 chr2 239006934 239006934 1 + G C LUAD 239006933 + 239006913 239006953 41 GGCCGCAGCACCACCAGGGCCGAGGTGGACCTCGTCGTGCA GGCCGCAGCACCACCAGGGCCCAGGTGGACCTCGTCGTGCA < 41bp 0.869078147628286 0.641684221971907 0.81987953 0.29363665 prediction 0.454787851312758 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:239006933 chr2:239006934 nonsynonymous SNV 0.146 1 22 hm5C_associated_SNPs_76772 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:239006918-239006959
64251 chr22 42209293 42209293 1 + G A UCEC 42209290 + 42209270 42209310 41 TTCTCCCACGTGGTGGAGAACACGGCCTTCTTCGGCGATGT TTCTCCCACGTGGTGGAGAACACAGCCTTCTTCGGCGATGT < 41bp 0.727393847363323 0.480900120542491 0.36273026 0.16687632 prediction 0.454787694726646 Functional Loss - CCDC134 ENSG00000100147 CDS Human protein_coding chr22:42209290 chr22:42209293 synonymous SNV . 0 24 hm5C_associated_SNPs_76773 0 0 3 DDX24 POSTAR2 ENCODE chr22:42209276-42209330
64251 chrX 46434747 46434747 1 + C T SKCM 46434745 + 46434725 46434765 41 CATGCGTCTGCTCGCCTACCCTCGCAGCGGAGAGGAGGGCG CATGCGTCTGCTCGCCTACCCTTGCAGCGGAGAGGAGGGCG < 41bp 0.750762463622357 0.523373702959824 0.825336 0.31075764 prediction 0.454777521325066 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46434745 chrX:46434747 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_76775 0 0 1 DDX6 POSTAR2 ENCODE chrX:46434705-46434764
64251 chr1 150463952 150463952 1 + G A LUAD 150463949 + 150463929 150463969 41 CTGCTCGACCCTTCCGGAGGCTAGAGGCTTCACGGGATCAG CTGCTCGACCCTTCCGGAGGCTAAAGGCTTCACGGGATCAG < 41bp 0.727382900627938 0.487194623349386 0.30890924 0.22061539 prediction 0.454765801255876 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463949 chr1:150463952 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_76780 0 0 1 PRPF8 POSTAR2 ENCODE chr1:150463948-150464029
64251 chr5 72864293 72864293 1 + C T GBM 72864291 + 72864271 72864311 41 AGAACCTATAAAAACCTTTTCTCGATTTAAAGACACAGCAT AGAACCTATAAAAACCTTTTCTTGATTTAAAGACACAGCAT < 41bp 0.850417451993546 0.623049808141649 0.26701975 0.049259245 prediction 0.454735287703794 Functional Loss - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72864291 chr5:72864293 stopgain 0.998 1 23 hm5C_associated_SNPs_76787 0 0 4 FUS POSTAR2 SRX029328 chr5:72864272-72864294
64251 chr11 95564631 95564631 1 + C T rs187690283 95564629 + 95564609 95564649 41 AAACCAGGGGAGTTTTAAAGCCCGAGAAACCACACATAATC AAACCAGGGGAGTTTTAAAGCCTGAGAAACCACACATAATC < 41bp 0.792937680918718 0.565573734540463 0.11378214 0.029401422 prediction 0.45472789275651 Functional Loss - CEP57 ENSG00000166037 UTR3 Human protein_coding chr11:95564629 chr11:95564631 . . 0 23 hm5C_associated_SNPs_76790 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:95564604-95564632
64251 chr19 19646432 19646432 1 + C T UCEC 19646430 + 19646410 19646450 41 GTCGGGGGCCCCTGCACCCGCGCGCTGGCCACGCTCAAGCT GTCGGGGGCCCCTGCACCCGCGTGCTGGCCACGCTCAAGCT < 41bp 0.778848668693987 0.551485886543738 0.90236413 0.9098247 prediction 0.454725564300498 Functional Loss - YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19646430 chr19:19646432 nonsynonymous SNV 0.573 0 23 hm5C_associated_SNPs_76791 0 0 1 LSM11 POSTAR2 ENCODE chr19:19646382-19646444
64251 chr5 137520243 137520243 1 + C T OV 137520240 + 137520220 137520260 41 TGCAACTGGGATTCCCATCCCTGCACTCGTTCATCAAGGAA TGCAACTGGGATTCCCATCCCTGTACTCGTTCATCAAGGAA < 41bp 0.727361330212756 0.497509404738675 0.074564785 0.08703625 prediction 0.454722660425511 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137520240 chr5:137520243 nonsynonymous SNV 0.902 1 24 hm5C_associated_SNPs_76792 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:137520224-137520243
64251 chr11 608689 608689 1 + G T CESC 608687 + 608667 608707 41 AAGGACAAGAGCAGGGAGCACAGGCGGGGCCCCTGGGGCCA AAGGACAAGAGCAGGGAGCACATGCGGGGCCCCTGGGGCCA < 41bp 0.727360839851214 0.368048816813674 0.90069914 0.6787414 prediction 0.454721679702428 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608687 chr11:608689 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_76793 0 0 4 EIF3H POSTAR2 ENCODE chr11:608649-608694
64251 chr9 139702125 139702125 1 + A C rs202106813 139702124 + 139702104 139702144 41 GAGGGGAAGCTCAAGGCGGCCAAGAAAAAGAAGAAGTAGCC GAGGGGAAGCTCAAGGCGGCCCAGAAAAAGAAGAAGTAGCC < 41bp 0.818494833807373 0.591137243537099 0.9187325 0.89989245 prediction 0.454715180540547 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139702124 chr9:139702125 nonsynonymous SNV 0.427 3 22 hm5C_associated_SNPs_76795 0 0 4 GRWD1 POSTAR2 ENCODE chr9:139702106-139702160
64251 chr11 63987951 63987951 1 + C T LGG 63987949 + 63987929 63987969 41 ATGGCTGGCTGCCGCCTGGCCTCCAAAGGCCGCACCATGGC ATGGCTGGCTGCCGCCTGGCCTTCAAAGGCCGCACCATGGC < 41bp 0.845999248401937 0.618651064443776 0.96741605 0.37685937 prediction 0.454696367916321 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987949 chr11:63987951 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_76801 0 0 3 FMR1 POSTAR2 ENCODE chr11:63987907-63987962
64251 chr3 171969147 171969147 1 + C T GBM 171969145 + 171969125 171969165 41 TGAAAGACCGCCAGATCGATCGCCAGAACCGCCTCAACAGC TGAAAGACCGCCAGATCGATCGTCAGAACCGCCTCAACAGC < 41bp 0.727341878628382 0.434856685847924 0.3483944 0.21951663 prediction 0.454683757256765 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:171969145 chr3:171969147 synonymous SNV . 0 23 hm5C_associated_SNPs_76803 0 0 2 DDX24 POSTAR2 ENCODE chr3:171969049-171969173
64251 chr16 29819072 29819072 1 + G A BLCA 29819069 + 29819049 29819089 41 CGCTTCAAGCGCAAGGACCGCATGAGCTACCACGTGCGCTC CGCTTCAAGCGCAAGGACCGCATAAGCTACCACGTGCGCTC < 41bp 0.746808962594665 0.519469782481774 0.2738778 0.106717706 prediction 0.454678360225782 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819069 chr16:29819072 nonsynonymous SNV 0.974 3 24 hm5C_associated_SNPs_76804 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:29818903-29819092
64251 chr6 26200113 26200113 1 + G C LUSC 26200109 + 26200089 26200129 41 GCTGCTGCCCGGGGAGCTGGCTAAGCACGCCGTGTCAGAGG GCTGCTGCCCGGGGAGCTGGCTAACCACGCCGTGTCAGAGG < 41bp 0.818529522481849 0.59119627721847 0.13520023 0.17542303 prediction 0.454666490526757 Functional Loss - HIST1H2BF ENSG00000197846 CDS Human other chr6:26200109 chr6:26200113 nonsynonymous SNV 0.992 2 25 hm5C_associated_SNPs_76809 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26200060-26200120
64251 chr1 181058313 181058313 1 + G A rs3747955 181058310 + 181058290 181058330 41 AGAGCCGCCCCCGCCCGCCGCTCGTGCCTCTTGGCCGGAGA AGAGCCGCCCCCGCCCGCCGCTCATGCCTCTTGGCCGGAGA < 41bp 0.776923595394395 0.549591014961213 0.31868452 0.16309983 prediction 0.454665160866364 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058310 chr1:181058313 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_76810 0 0 1 SERBP1 POSTAR2 ENCODE chr1:181058298-181058339
64251 chr20 49575482 49575482 1 + G T CESC 49575480 + 49575460 49575500 41 GCTGGCGTCGGCTCTTTTGGCTGAGCAGGAACCGCAGCCAG GCTGGCGTCGGCTCTTTTGGCTTAGCAGGAACCGCAGCCAG < 41bp 0.898605769003762 0.671278516433687 0.23725495 0.1451681 prediction 0.45465450514015 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575480 chr20:49575482 stopgain 0.033 0 23 hm5C_associated_SNPs_76814 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:49575457-49575482
64251 chr3 49450057 49450057 1 + G A BRCA 49450054 + 49450034 49450074 41 TTCTACGGGAATACAGTGACCGGGTTGTATCACCGTCCAGG TTCTACGGGAATACAGTGACCGGATTGTATCACCGTCCAGG < 41bp 0.727326848669078 0.493018049446487 0.52004933 0.39673403 prediction 0.454653697338157 Functional Loss - TCTA ENSG00000145022 CDS Human protein_coding chr3:49450054 chr3:49450057 synonymous SNV . 0 24 hm5C_associated_SNPs_76815 0 0 2 PPIG POSTAR2 ENCODE chr3:49450030-49450077
64251 chr20 25187902 25187902 1 + G A rs35296506 25187899 + 25187879 25187919 41 CACCAGGGCAGCCCCGGGGGCCCGGTGGGGTCAGCAGGCCC CACCAGGGCAGCCCCGGGGGCCCAGTGGGGTCAGCAGGCCC < 41bp 0.737789338402806 0.510465488915996 0.71872747 0.74442947 prediction 0.454647698973619 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187899 chr20:25187902 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_76816 0 0 4 DDX3X POSTAR2 ENCODE chr20:25187847-25187915
64251 chrX 105855709 105855709 1 + G A SKCM 105855706 + 105855686 105855726 41 GGCATTCAAATGAGAATTTCCAGGGTCTCATGTCTTTACAA GGCATTCAAATGAGAATTTCCAGAGTCTCATGTCTTTACAA < 41bp 0.727319893631524 0.4896378341207 0.8490385 0.55743825 prediction 0.454639787263049 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855706 chrX:105855709 synonymous SNV . 0 24 hm5C_associated_SNPs_76818 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:105855687-105855717
64251 chr1 32688163 32688163 1 + G A CESC 32688160 + 32688140 32688180 41 AGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAG AGCCGATCCTACTGCAGGGCCATAAGCGGTCCATTACGCAG < 41bp 0.759977786946385 0.532659479908429 0.20205486 0.18804723 prediction 0.454636614075913 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32688160 chr1:32688163 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76819 0 0 14 EIF3A POSTAR2 GSE65004,GSM1585666 chr1:32688138-32688163
64251 chr2 85510676 85510676 1 + C T STAD 85510674 + 85510654 85510694 41 TCCAGCGCCACAGTCAAGGACACGAGGTCACCATCTCCAGC TCCAGCGCCACAGTCAAGGACATGAGGTCACCATCTCCAGC < 41bp 0.7273182659957 0.453265847541938 0.0440301 0.16378215 prediction 0.454636531991399 Functional Loss - TCF7L1 ENSG00000152284 CDS Human protein_coding chr2:85510674 chr2:85510676 nonsynonymous SNV 0.906 4 23 hm5C_associated_SNPs_76820 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:85510666-85510692
64251 chr6 105526589 105526589 1 + G A SKCM 105526586 + 105526566 105526606 41 TCACCTCAAGAAGCTTCCTCCACGAAGTCATCTATAGCACC TCACCTCAAGAAGCTTCCTCCACAAAGTCATCTATAGCACC < 41bp 0.731752322955783 0.504436701054526 0.39666054 0.07680762 prediction 0.454631243802513 Functional Loss - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105526586 chr6:105526589 synonymous SNV . 0 24 hm5C_associated_SNPs_76822 0 0 2 GRWD1 POSTAR2 ENCODE chr6:105526531-105526643
64251 chr17 21217526 21217526 1 + T C COAD 21217525 + 21217505 21217545 41 CTGCCTTCGTGAAGGAGATCCTGGGAGAAGACTCATAGGGG CTGCCTTCGTGAAGGAGATCCCGGGAGAAGACTCATAGGGG < 41bp 0.727312639179788 0.49401652581662 0.54112715 0.8610458 prediction 0.454625278359576 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21217525 chr17:21217526 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_76823 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:21217494-21217534
64251 chr19 50001257 50001257 1 + G C BLCA 50001256 + 50001236 50001276 41 ATCCGCAAGTACAACCGCTTCGAGAAGCGCCACAAGAACAT ATCCGCAAGTACAACCGCTTCCAGAAGCGCCACAAGAACAT < 41bp 0.88187695504657 0.654567967197142 0.35169944 0.37924784 prediction 0.454617975698855 Functional Loss - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50001256 chr19:50001257 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_76825 0 0 45 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50001160-50001280
64251 chr17 18226187 18226187 1 + G A UCEC 18226184 + 18226164 18226204 41 ACCACCTGCACCTGCCTACCCACGACAAGGAGACAGAGGAG ACCACCTGCACCTGCCTACCCACAACAAGGAGACAGAGGAG < 41bp 0.777377574786555 0.550069398395765 0.12908745 0.07384908 prediction 0.45461635278158 Functional Loss - SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18226184 chr17:18226187 nonsynonymous SNV 0.328 0 24 hm5C_associated_SNPs_76826 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:18226105-18226194
64251 chr19 8464939 8464939 1 + C T HNSC 8464937 + 8464917 8464957 41 GAGCGCTACCGCGCCATCACCTCCGCGTGCGTGTCGGCAGC GAGCGCTACCGCGCCATCACCTTCGCGTGCGTGTCGGCAGC < 41bp 0.820125390691888 0.592820264380634 0.8281902 0.07023853 prediction 0.454610252622507 Functional Loss - RAB11B ENSG00000185236 CDS Human protein_coding chr19:8464937 chr19:8464939 nonsynonymous SNV 0.956 4 23 hm5C_associated_SNPs_76828 0 0 1 AKAP8L POSTAR2 ENCODE chr19:8464872-8464942
64251 chr5 251562 251562 1 + G A GBM 251559 + 251539 251579 41 GCACGGAAGGAGTCACGGGGCGCGCATGCCAGGGAAGACTA GCACGGAAGGAGTCACGGGGCGCACATGCCAGGGAAGACTA < 41bp 0.7462475844474 0.518947673592867 0.17473859 0.18030688 prediction 0.454599821709066 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:251559 chr5:251562 synonymous SNV . 0 24 hm5C_associated_SNPs_76830 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:251524-251578
64251 chr15 43641185 43641185 1 + C T rs62019439 43641182 + 43641162 43641202 41 GGGCATGGAACATTTCTCAACTCCGGTGAGGGAGGATCCCT GGGCATGGAACATTTCTCAACTCTGGTGAGGGAGGATCCCT < 41bp 0.751232328221338 0.523933059288367 0.278899 0.27649266 prediction 0.454598537865942 Functional Loss - ADAL ENSG00000168803 CDS Human protein_coding chr15:43641182 chr15:43641185 synonymous SNV . 0 24 hm5C_associated_SNPs_76831 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:43641157-43641186
64251 chr1 65721296 65721296 1 + G C rs187058173 65721292 + 65721272 65721312 41 AAACACTGAAGTGTGCTAAGCAGGGAAGTGACCTGATCTGG AAACACTGAAGTGTGCTAAGCAGGCAAGTGACCTGATCTGG < 41bp 0.727294745943762 0.420992225243453 0.8474846 0.47848475 prediction 0.454589491887524 Functional Loss - AK4;DNAJC6 ENSG00000116675 intronic Human protein_coding chr1:65721292 chr1:65721296 . . 0 25 hm5C_associated_SNPs_76834 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:65721281-65721318
64251 chr16 30764754 30764754 1 + C T SKCM 30764752 + 30764732 30764772 41 TGCTGGAAGCAGTGAGCTTTCTCCATGCCAACAACATTGTG TGCTGGAAGCAGTGAGCTTTCTTCATGCCAACAACATTGTG < 41bp 0.86859308961752 0.641302434914887 0.95878696 0.23095345 prediction 0.454581309405265 Functional Loss - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30764752 chr16:30764754 synonymous SNV . 0 23 hm5C_associated_SNPs_76836 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:30764721-30764811
64251 chr13 111371749 111371749 1 + C T PRAD 111371747 + 111371727 111371767 41 GGAGCTGGTGGAGAACCGCACGCGGCAGGTGGACAGCCACG GGAGCTGGTGGAGAACCGCACGTGGCAGGTGGACAGCCACG < 41bp 0.794890035844347 0.567601968255823 0.49802938 0.5254265 prediction 0.454576135177048 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371747 chr13:111371749 nonsynonymous SNV 0.799 4 23 hm5C_associated_SNPs_76837 0 0 3 PPIG POSTAR2 ENCODE chr13:111371703-111371798
64251 chr4 154387597 154387597 1 + G C rs71620317 154387596 + 154387576 154387616 41 CGGCTGCTACTGCCGCACCGCGGCGGCCGTGAACCTCCTGC CGGCTGCTACTGCCGCACCGCCGCGGCCGTGAACCTCCTGC < 41bp 0.86375807536562 0.63647225106046 0.75919676 0.37810272 prediction 0.45457164861032 Functional Loss - TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154387596 chr4:154387597 synonymous SNV . 0 22 hm5C_associated_SNPs_76838 0 0 1 DDX3X POSTAR2 ENCODE chr4:154387576-154387625
64251 chr20 47845325 47845325 1 + C T UCEC 47845323 + 47845303 47845343 41 CCCGCCAGGCTCCAGTCACCCGCGTGCTGGTGCTAGTGCCC CCCGCCAGGCTCCAGTCACCCGTGTGCTGGTGCTAGTGCCC < 41bp 0.841677931923689 0.614400348905228 0.40231237 0.40366516 prediction 0.454555166036923 Functional Loss - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47845323 chr20:47845325 synonymous SNV . 0 23 hm5C_associated_SNPs_76840 0 0 2 UCHL5 POSTAR2 ENCODE chr20:47845321-47845344
64251 chr7 148427336 148427336 1 + G A BLCA 148427333 + 148427313 148427353 41 ACGGCAGAGCATGGCCAAGTCCAGATATATGGAGCTCTACA ACGGCAGAGCATGGCCAAGTCCAAATATATGGAGCTCTACA < 41bp 0.727277289858064 0.489016638818735 0.37864324 0.17289844 prediction 0.454554579716127 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148427333 chr7:148427336 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76841 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:148427306-148427352
64251 chr7 148921201 148921201 1 + G A MESO 148921198 + 148921178 148921218 41 CGCGGAGGCGGGGACGGGGGCAGGCGGCGGCTGTGGCAGCT CGCGGAGGCGGGGACGGGGGCAGACGGCGGCTGTGGCAGCT < 41bp 0.737236470907843 0.509965242764432 0.9257972 0.9197359 prediction 0.454542456286823 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921198 chr7:148921201 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_76843 0 0 10 BUD13 POSTAR2 ENCODE chr7:148921175-148921216
64251 chr1 214171022 214171022 1 + G A STAD 214171019 + 214170999 214171039 41 AGCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCTCCAG AGCCCTCCCGCCAGGTTCCTCAGATCTTCCCACCTCTCCAG < 41bp 0.727268454959297 0.490135367844539 0.89250267 0.4821527 prediction 0.454536909918594 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171019 chr1:214171022 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_76844 0 0 2 PCBP2 POSTAR2 ENCODE chr1:214171009-214171056
64251 chr8 27657152 27657152 1 + C T LGG 27657149 + 27657129 27657169 41 ATGTTCAGATGTACCAGAACCTGCAGTCTGTGGGATAAGTA ATGTTCAGATGTACCAGAACCTGTAGTCTGTGGGATAAGTA < 41bp 0.727268107631508 0.494440344021871 0.30180898 0.21924308 prediction 0.454536215263016 Functional Loss - ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27657149 chr8:27657152 nonsynonymous SNV 0.843 4 24 hm5C_associated_SNPs_76846 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:27657115-27657163
64251 chr11 47183130 47183130 1 + C T UCEC 47183128 + 47183108 47183148 41 CTGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGA CTGGAGACCTCTCCATCATTCCTGAAAAGTGGATGGAGAGA < 41bp 0.72726636955275 0.455903671137191 0.22578266 0.12104857 prediction 0.454532739105501 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47183128 chr11:47183130 stopgain 0.996 1 23 hm5C_associated_SNPs_76848 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47183072-47183131
64251 chr12 58113926 58113926 1 + C T HNSC 58113923 + 58113903 58113943 41 TCCGGGTCCGGGTCACCAAGCTCCGTCTCGGAGGCCCTAAT TCCGGGTCCGGGTCACCAAGCTCTGTCTCGGAGGCCCTAAT < 41bp 0.727719550083449 0.500466615694496 0.14717925 0.061357588 prediction 0.454505868777906 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58113923 chr12:58113926 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_76856 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:58113920-58113948
64251 chr12 101720957 101720957 1 + G T LUSC 101720955 + 101720935 101720975 41 ATTGTCCTGCGGTTCCTGGCCGGGACCCAACCTGAGGAGAT ATTGTCCTGCGGTTCCTGGCCGTGACCCAACCTGAGGAGAT < 41bp 0.727251234062367 0.40393551431024 0.6819929 0.04229039 prediction 0.454502468124734 Functional Loss - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101720955 chr12:101720957 nonsynonymous SNV 0.800 3 23 hm5C_associated_SNPs_76858 0 0 1 FMR1 POSTAR2 ENCODE chr12:101720905-101720981
64251 chr19 39898696 39898696 1 + C T BLCA 39898694 + 39898674 39898714 41 ACTGAGCTATGTCGGACCTTCTCAGAGAGTGGGCGCTGCCG ACTGAGCTATGTCGGACCTTCTTAGAGAGTGGGCGCTGCCG < 41bp 0.727242708602928 0.46179868217351 0.37874055 0.41782913 prediction 0.454485417205856 Functional Loss - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898694 chr19:39898696 nonsynonymous SNV 0.974 1 23 hm5C_associated_SNPs_76861 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:39898681-39898708
64251 chr7 128399055 128399055 1 + T C UCEC 128399054 + 128399034 128399074 41 GTTCACAGCTTTCCTGCACCCTGAGGAGTATGACTACATGA GTTCACAGCTTTCCTGCACCCCGAGGAGTATGACTACATGA < 41bp 0.766415983471916 0.539176172503638 0.17696035 0.18347135 prediction 0.454479621936554 Functional Loss - CALU ENSG00000128595 CDS Human protein_coding chr7:128399054 chr7:128399055 synonymous SNV . 0 22 hm5C_associated_SNPs_76863 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:128399001-128399072
64251 chr17 7605786 7605786 1 + C T LUSC 7605784 + 7605764 7605804 41 CCTGGGATGATGGCTCCCCTCTCGCCTTGCTGGGAGGGCAC CCTGGGATGATGGCTCCCCTCTTGCCTTGCTGGGAGGGCAC < 41bp 0.825854120477223 0.598619899346556 0.3979119 0.1675832 prediction 0.454468442261335 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7605784 chr17:7605786 synonymous SNV . 0 23 hm5C_associated_SNPs_76868 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7605763-7605787
64251 chr19 36276380 36276380 1 + G T LUAD 36276378 + 36276358 36276398 41 TCTCTGTCATCGCAGGCCAGCGGGGCTGGTGAGCAAGGCGG TCTCTGTCATCGCAGGCCAGCGTGGCTGGTGAGCAAGGCGG < 41bp 0.72723220388498 0.368566981190552 0.91475374 0.81121814 prediction 0.454464407769959 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36276378 chr19:36276380 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_76869 0 0 3 DDX24 POSTAR2 ENCODE chr19:36276341-36276385
64251 chr19 36149530 36149530 1 + C T STAD 36149528 + 36149508 36149548 41 GATGAGCAACGGGCTGAAGGCACGTTTCCCGGGAAGATCTG GATGAGCAACGGGCTGAAGGCATGTTTCCCGGGAAGATCTG < 41bp 0.818493771983488 0.591262725091017 0.04631251 0.05823061 prediction 0.454462093784942 Functional Loss - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36149528 chr19:36149530 nonsynonymous SNV 0.946 2 23 hm5C_associated_SNPs_76870 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36149499-36149554
64251 chr12 12870877 12870877 1 + C T SKCM 12870875 + 12870855 12870895 41 GCCTGCAGGAACCTCTTCGGCCCGGTGGACCACGAAGAGTT GCCTGCAGGAACCTCTTCGGCCTGGTGGACCACGAAGAGTT < 41bp 0.72722140701038 0.470883354848078 0.42432845 0.32820433 prediction 0.454442814020759 Functional Loss - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12870875 chr12:12870877 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_76877 1 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:12870857-12870954
64251 chr5 75979002 75979002 1 + G T LUAD 75979000 + 75978980 75979020 41 ATGACTTACTGAGTGAATTGCTGGGGTCGCTGGGAGAGGTG ATGACTTACTGAGTGAATTGCTTGGGTCGCTGGGAGAGGTG < 41bp 0.727219258943934 0.383811925689388 0.86395895 0.25481692 prediction 0.454438517887869 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75979000 chr5:75979002 synonymous SNV . 0 23 hm5C_associated_SNPs_76878 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:75978995-75979015
64251 chr5 75979003 75979003 1 + G A OV 75979000 + 75978980 75979020 41 ATGACTTACTGAGTGAATTGCTGGGGTCGCTGGGAGAGGTG ATGACTTACTGAGTGAATTGCTGAGGTCGCTGGGAGAGGTG < 41bp 0.727219258943934 0.485690354571066 0.86395895 0.54976207 prediction 0.454438517887869 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75979000 chr5:75979003 nonsynonymous SNV 0.020 2 24 hm5C_associated_SNPs_76879 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:75978995-75979015
64251 chr2 132289309 132289309 1 + T C COAD 132289308 + 132289288 132289328 41 ACGTCTCCCAGAAGGCGGACCTGGAAGAGGAGCCCCTACTT ACGTCTCCCAGAAGGCGGACCCGGAAGAGGAGCCCCTACTT < 41bp 0.810504929334212 0.583289843090045 0.43492252 0.67850554 prediction 0.454430172488334 Functional Loss - CCDC74A ENSG00000163040 CDS Human protein_coding chr2:132289308 chr2:132289309 nonsynonymous SNV 0.086 3 22 hm5C_associated_SNPs_76881 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:132289282-132289320
64251 chr2 27730607 27730607 1 + G A STAD 27730604 + 27730584 27730624 41 ACTTCCATCCTTCCCTCTCTCACGGAAATCGATACTGTGGT ACTTCCATCCTTCCCTCTCTCACAGAAATCGATACTGTGGT < 41bp 0.783588170109217 0.556374018894424 0.44600403 0.12772328 prediction 0.454428302429585 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27730604 chr2:27730607 synonymous SNV . 0 24 hm5C_associated_SNPs_76883 0 0 1 PPIG POSTAR2 ENCODE chr2:27730607-27730644
64251 chr1 32566178 32566178 1 + C T LUAD 32566176 + 32566156 32566196 41 GCTTCCATGTGAGTCTCCTCCCCGGGGAAGGAGGGTTGGGG GCTTCCATGTGAGTCTCCTCCCTGGGGAAGGAGGGTTGGGG < 41bp 0.727212690930816 0.480789765875985 0.59702677 0.23980567 prediction 0.454425381861632 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32566176 chr1:32566178 synonymous SNV . 0 23 hm5C_associated_SNPs_76884 0 0 4 PRPF8 POSTAR2 ENCODE chr1:32566155-32566237
64251 chr19 52877610 52877610 1 + G T UCEC 52877608 + 52877588 52877628 41 TGGAGCAAAGGAGAGATCCCCGGAATCTGCAGAGTGAAGTG TGGAGCAAAGGAGAGATCCCCGTAATCTGCAGAGTGAAGTG < 41bp 0.897969721839537 0.670760221366004 0.90876603 0.5341697 prediction 0.454419000947065 Functional Loss - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52877608 chr19:52877610 synonymous SNV . 0 23 hm5C_associated_SNPs_76886 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:52877591-52877627
64251 chr7 76026893 76026893 1 + G A LUAD 76026890 + 76026870 76026910 41 CAGTTGTGCACACCCCAGCCCAGGCTCTGGCAGGCTGCCAG CAGTTGTGCACACCCCAGCCCAGACTCTGGCAGGCTGCCAG < 41bp 0.765138295201345 0.53792972635596 0.8783928 0.66910934 prediction 0.45441713769077 Functional Loss - SSC4D ENSG00000146700 CDS Human protein_coding chr7:76026890 chr7:76026893 synonymous SNV . 0 24 hm5C_associated_SNPs_76887 0 0 1 DDX3X POSTAR2 ENCODE chr7:76026866-76026931
64251 chr1 161089011 161089011 1 + G T UCEC 161089009 + 161088989 161089029 41 CATCGACGCCAGACAAGCAACAGAACTTTAAAACATGTGCT CATCGACGCCAGACAAGCAACATAACTTTAAAACATGTGCT < 41bp 0.727208271307606 0.386418588522754 0.13029611 0.10431737 prediction 0.454416542615211 Functional Loss - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161089009 chr1:161089011 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_76888 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161088976-161089014
64251 chr17 73106122 73106122 1 + A C rs79652007 73106121 + 73106101 73106141 41 CCCCCTCCGCGAGCCCCAACCAGTAGACGGTTCCCTGTCTC CCCCCTCCGCGAGCCCCAACCCGTAGACGGTTCCCTGTCTC < 41bp 0.79065134512776 0.563443493941717 0.913501 0.32352993 prediction 0.454415702372085 Functional Loss - ARMC7 ENSG00000125449 UTR5 Human protein_coding chr17:73106121 chr17:73106122 . . 0 22 hm5C_associated_SNPs_76889 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:73106120-73106140
64251 chr9 134038531 134038531 1 + G A UCEC 134038528 + 134038508 134038548 41 ACTTCCCTGTGGAGCCTGTCCTCGGCTGTTCCTTCCCAGAG ACTTCCCTGTGGAGCCTGTCCTCAGCTGTTCCTTCCCAGAG < 41bp 0.778846135157761 0.551640943869294 0.33829713 0.19500163 prediction 0.454410382576935 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134038528 chr9:134038531 synonymous SNV . 0 24 hm5C_associated_SNPs_76892 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:134038525-134038546
64251 chr2 138771444 138771444 1 + T C STAD 138771443 + 138771423 138771463 41 CAGATGACCTCACTCAGATGCTGGACAACCTAGGGCTTAAG CAGATGACCTCACTCAGATGCCGGACAACCTAGGGCTTAAG < 41bp 0.772933027436475 0.5457303319823 0.31070822 0.24543118 prediction 0.45440539090835 Functional Loss - HNMT ENSG00000150540 CDS Human protein_coding chr2:138771443 chr2:138771444 nonsynonymous SNV 0.650 4 22 hm5C_associated_SNPs_76893 1 0 1 UCHL5 POSTAR2 ENCODE chr2:138771342-138771468
64251 chr1 33065784 33065784 1 - C G LAML 33065788 - 33065768 33065808 41 ATTCTGCAAGACACTCATTACACAGTCTGTAGCGCCTGGTT ATTCTGCAAGACACTCATTACACACTCTGTAGCGCCTGGTT < 41bp 0.727199924015905 0.45461643627703 0.0741705 0.022420645 prediction 0.45439984803181 Functional Loss - ZBTB8A ENSG00000160062 CDS Human protein_coding chr1:33065788 chr1:33065784 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_76894 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:33065759-33065785
64251 chr19 55897765 55897765 1 + T C COAD 55897764 + 55897744 55897784 41 TGGATGGTCGTGCGGAACTGCTCCAGTTTCCTGATCAAGAG TGGATGGTCGTGCGGAACTGCCCCAGTTTCCTGATCAAGAG < 41bp 0.820517832916209 0.593326201063139 0.88457334 0.1008656 prediction 0.454383263706141 Functional Loss - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55897764 chr19:55897765 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_76897 0 0 27 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897715-55897787
64251 chr22 46719098 46719098 1 + G A SKCM 46719095 + 46719075 46719115 41 TCTTGGACTTAGGTGACTCCCCGGACAGCTCAACACCAAAG TCTTGGACTTAGGTGACTCCCCGAACAGCTCAACACCAAAG < 41bp 0.781657208225836 0.55447829642114 0.36097366 0.224531 prediction 0.454357823609392 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46719095 chr22:46719098 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_76906 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:46719066-46719111
64251 chr17 79857807 79857807 1 + G A COAD 79857804 + 79857784 79857824 41 TCCCCTCCGTAGGCAAGGTGCCCGGCGACGACTGCCCGCTG TCCCCTCCGTAGGCAAGGTGCCCAGCGACGACTGCCCGCTG < 41bp 0.75574053653908 0.528565196247542 0.4974603 0.14571321 prediction 0.454350680583075 Functional Loss - ANAPC11 ENSG00000141552 CDS Human protein_coding chr17:79857804 chr17:79857807 nonsynonymous SNV 0.852 0 24 hm5C_associated_SNPs_76908 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79857797-79857836
64251 chr20 48808476 48808476 1 + G A LUSC 48808473 + 48808453 48808493 41 CGCAACCTGGAGACGCAGCACAAGGTCCTGGAGCTCACGGC CGCAACCTGGAGACGCAGCACAAAGTCCTGGAGCTCACGGC < 41bp 0.765998057115713 0.538824406121568 0.7214222 0.40706474 prediction 0.454347301988289 Functional Loss - CEBPB ENSG00000172216 CDS Human protein_coding chr20:48808473 chr20:48808476 synonymous SNV . 0 24 hm5C_associated_SNPs_76910 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:48808440-48808495
64251 chr6 131992466 131992466 1 + C T SARC 131992464 + 131992444 131992484 41 CCAAATCATTACACCATTGTCACGGTAAGTGCTTGACCCAG CCAAATCATTACACCATTGTCATGGTAAGTGCTTGACCCAG < 41bp 0.789625294303358 0.562453694175078 0.8391415 0.8305685 prediction 0.454343200256561 Functional Loss - ENPP3 ENSG00000154269 CDS Human protein_coding chr6:131992464 chr6:131992466 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_76911 0 0 5 PRPF8 POSTAR2 ENCODE chr6:131992441-131992511
64251 chr5 148632354 148632354 1 + G A LUAD 148632351 + 148632331 148632371 41 TGAACTGCTGCTGGTGACTACAAGAGGAAGAAACCGACTGC TGAACTGCTGCTGGTGACTACAAAAGGAAGAAACCGACTGC < 41bp 0.730547023504884 0.503383629265357 0.56991935 0.16231698 prediction 0.454326788479054 Functional Loss - ABLIM3 ENSG00000173210 CDS Human protein_coding chr5:148632351 chr5:148632354 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_76920 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:148632319-148632357
64251 chr2 184024289 184024289 1 + T C UCEC 184024288 + 184024268 184024308 41 TTACACCACCAATCAAAACTCTAGGTACACCAACACAACCT TTACACCACCAATCAAAACTCCAGGTACACCAACACAACCT < 41bp 0.788410805877381 0.561247875439902 0.115359575 0.27325356 prediction 0.454325860874958 Functional Loss - NUP35 ENSG00000163002 CDS Human protein_coding chr2:184024288 chr2:184024289 nonsynonymous SNV 0.969 0 22 hm5C_associated_SNPs_76921 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:184024230-184024291
64251 chr18 12325985 12325985 1 + G A UCEC 12325982 + 12325962 12326002 41 AAGGCCTTCCTGCACTGGTTCACGGGTGAGGGCATGGATGA AAGGCCTTCCTGCACTGGTTCACAGGTGAGGGCATGGATGA < 41bp 0.783563363782264 0.556402551393073 0.46147838 0.20220166 prediction 0.454321624778381 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325982 chr18:12325985 synonymous SNV . 0 24 hm5C_associated_SNPs_76922 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:12325967-12325991
64251 chr7 148483671 148483671 1 + G A BLCA 148483668 + 148483648 148483688 41 AGAACCCAGAGGAGGCAGAACTAGAAGACACACTCAATCAA AGAACCCAGAGGAGGCAGAACTAAAAGACACACTCAATCAA < 41bp 0.727158876785421 0.48855568171688 0.2485317 0.21527138 prediction 0.454317753570842 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148483668 chr7:148483671 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_76923 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148483636-148483676
64251 chr14 76964613 76964613 1 + G A SKCM 76964610 + 76964590 76964630 41 AGAAGCTGCAGGACCTGCTGCACGAGGCACTGCAGGACTAC AGAAGCTGCAGGACCTGCTGCACAAGGCACTGCAGGACTAC < 41bp 0.780768123831841 0.553618005195679 0.37833184 0.29946503 prediction 0.454300237272324 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76964610 chr14:76964613 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_76929 0 0 2 UCHL5 POSTAR2 ENCODE chr14:76964586-76964688
64251 chr19 37853945 37853945 1 + G A OV 37853942 + 37853922 37853962 41 GGAGAGAAGCCTTACATTTGCAGGGAGTGTGAGCAAGGCTT GGAGAGAAGCCTTACATTTGCAGAGAGTGTGAGCAAGGCTT < 41bp 0.780379475477178 0.553236651961178 0.81259334 0.18973559 prediction 0.454285647032001 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853942 chr19:37853945 synonymous SNV . 0 24 hm5C_associated_SNPs_76930 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37853852-37853945
64251 chr8 104068114 104068114 1 + G A CESC 104068111 + 104068091 104068131 41 TGCAGGTTAAACCACAACGACTGGATTAAGCAGTATGAAAC TGCAGGTTAAACCACAACGACTGAATTAAGCAGTATGAAAC < 41bp 0.729813312031202 0.502672391204241 0.09983221 0.0393039 prediction 0.454281841653922 Functional Loss - ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104068111 chr8:104068114 stopgain 1.000 1 24 hm5C_associated_SNPs_76932 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:104068099-104068127
64251 chr16 29675600 29675600 1 + G A STAD 29675597 + 29675577 29675617 41 GGAGACTTCCAAAGGCACCTCTGGACCCCCTGTTACCATGG GGAGACTTCCAAAGGCACCTCTGAACCCCCTGTTACCATGG < 41bp 0.772989921521899 0.545853544964777 0.41266474 0.31721964 prediction 0.454272753114244 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675597 chr16:29675600 nonsynonymous SNV 0.002 2 24 hm5C_associated_SNPs_76933 0 0 3 IGF2BP2 POSTAR2 ENCODE chr16:29675576-29675668
64251 chr17 7577518 7577518 1 - T A BRCA 7577522 - 7577502 7577542 41 AACCGGAGGCCCATCCTCACCATCATCACACTGGAAGACTC AACCGGAGGCCCATCCTCACCATCTTCACACTGGAAGACTC < 41bp 0.727111434268705 0.418073061961041 0.06403765 0.10579181 prediction 0.454222868537411 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577522 chr17:7577518 nonsynonymous SNV 0.948 4 25 hm5C_associated_SNPs_76942 7 0 31 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:7577500-7577520
64251 chr14 55227114 55227114 1 + T C LUAD 55227113 + 55227093 55227133 41 CGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGC CGGCCGGGGCCAGCGGGGGGCCCCAGCCGCACCAGCTGAGC < 41bp 0.727110020190186 0.469761154731421 0.89996964 0.49503806 prediction 0.454220040380372 Functional Loss - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55227113 chr14:55227114 nonsynonymous SNV 0.872 2 22 hm5C_associated_SNPs_76943 0 0 1 BUD13 POSTAR2 ENCODE chr14:55227100-55227214
64251 chr3 52518529 52518529 1 + G A SKCM 52518526 + 52518506 52518546 41 CCCACCCGCCCTGGTCTCTCCAGGAATCATGTTCGTTCAGG CCCACCCGCCCTGGTCTCTCCAGAAATCATGTTCGTTCAGG < 41bp 0.727107767515178 0.496028444489982 0.719741 0.2752273 prediction 0.454215535030356 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52518526 chr3:52518529 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_76944 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:52518529-52518530
64251 chr19 16976364 16976364 1 + C T COAD 16976362 + 16976342 16976382 41 GCACGTCGGAGGTGATCCAGCGCCGTGCCATTTATCGCATC GCACGTCGGAGGTGATCCAGCGTCGTGCCATTTATCGCATC < 41bp 0.727095276954472 0.452765362191015 0.36876166 0.3678787 prediction 0.454190553908945 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976362 chr19:16976364 synonymous SNV . 0 23 hm5C_associated_SNPs_76947 0 0 7 GRWD1 POSTAR2 ENCODE chr19:16976357-16976460
64251 chr5 140481851 140481851 1 + G T LUSC 140481848 + 140481828 140481868 41 GCGCCACAGACCGTGGCTCCCCGGCTTTGAGCAGCGAGGCG GCGCCACAGACCGTGGCTCCCCGTCTTTGAGCAGCGAGGCG < 41bp 0.727088757908622 0.324138370550956 0.18276343 0.040157795 prediction 0.454177515817244 Functional Loss - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140481848 chr5:140481851 nonsynonymous SNV 0.029 1 24 hm5C_associated_SNPs_76951 0 0 1 FUS POSTAR2 GSE43308,GSM1060383 chr5:140481840-140481860
64251 chr22 33257395 33257395 1 + A C rs190591971 33257391 + 33257371 33257411 41 GTGTGAGCAGAAGCTGATGCCAGCATGTCACTGGTTTTGAA GTGTGAGCAGAAGCTGATGCCAGCCTGTCACTGGTTTTGAA < 41bp 0.727084380232967 0.361822422256933 0.116925955 0.022568941 prediction 0.454168760465933 Functional Loss - TIMP3 ENSG00000100234 UTR3 Human protein_coding chr22:33257391 chr22:33257395 . . 0 25 hm5C_associated_SNPs_76952 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr22:33257389-33257409
64251 chr6 26598535 26598535 1 + G A CESC 26598532 + 26598512 26598552 41 GGTCCCACCTCAGCGAGCACCTCGCCTTTGAGCGCCAGGTG GGTCCCACCTCAGCGAGCACCTCACCTTTGAGCGCCAGGTG < 41bp 0.762593448687311 0.535522782387442 0.087521106 0.10828927 prediction 0.454141332599739 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598532 chr6:26598535 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_76955 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26598522-26598560
64251 chr7 75608840 75608840 1 + G T UCEC 75608837 + 75608817 75608857 41 GAGTTTGCCAACCGCCTGTCCAAGGACGCCCACCGCTACGG GAGTTTGCCAACCGCCTGTCCAATGACGCCCACCGCTACGG < 41bp 0.727068396656627 0.311419615997246 0.7994677 0.43199575 prediction 0.454136793313254 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75608837 chr7:75608840 stopgain 1.000 4 24 hm5C_associated_SNPs_76959 0 0 13 BUD13 POSTAR2 ENCODE chr7:75608825-75608897
64251 chr6 158485894 158485894 1 + C T COAD 158485892 + 158485872 158485912 41 GGATGGAGCCCGGTCCATGTCTCGAACCATCCAGTCCAACT GGATGGAGCCCGGTCCATGTCTTGAACCATCCAGTCCAACT < 41bp 0.858923574799538 0.631858482421961 0.80839485 0.006520599 prediction 0.454130184755154 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158485892 chr6:158485894 stopgain 0.999 1 23 hm5C_associated_SNPs_76960 0 0 4 BUD13 POSTAR2 ENCODE chr6:158485807-158485921
64251 chr11 68675722 68675722 1 + C T rs144401213 68675720 + 68675700 68675740 41 CGGTGGCCTTTGATGAGTCCCACGATTTCCAGTTGAGCTTG CGGTGGCCTTTGATGAGTCCCATGATTTCCAGTTGAGCTTG < 41bp 0.849264462761949 0.622214752474586 0.0398255 0.18647659 prediction 0.454099420574725 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68675720 chr11:68675722 synonymous SNV . 0 23 hm5C_associated_SNPs_76968 2 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68675711-68675749
64251 chr1 155036349 155036349 1 + G T SARC 155036347 + 155036327 155036367 41 GTCCTCTGGGCCGCGTTCCTCGGCTCCCCTCTGCGCGGGGG GTCCTCTGGGCCGCGTTCCTCGTCTCCCCTCTGCGCGGGGG < 41bp 0.727049664409129 0.376432406496985 0.81014585 0.22529843 prediction 0.454099328818258 Functional Loss - EFNA4 ENSG00000143590;ENSG00000243364;ENSG00000251246 CDS Human other chr1:155036347 chr1:155036349 nonsynonymous SNV 0.909 3 23 hm5C_associated_SNPs_76969 0 0 4 DDX3X POSTAR2 ENCODE chr1:155036307-155036386
64251 chr6 26104378 26104378 1 + G C HNSC 26104377 + 26104357 26104397 41 TTTTCTTAGAGAACGTTATTCGAGACGCCGTCACCTATACG TTTTCTTAGAGAACGTTATTCCAGACGCCGTCACCTATACG < 41bp 0.87069524969057 0.6436477343559 0.30194694 0.256694 prediction 0.45409503066934 Functional Loss - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104377 chr6:26104378 nonsynonymous SNV 0.005 2 22 hm5C_associated_SNPs_76971 0 0 51 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26104160-26104500
64251 chr17 61905165 61905165 1 + C T rs546520536 61905163 + 61905143 61905183 41 ACGGGACGCCAGTCCTTTGGCTCCGTTCCGCTGGCTCCTTC ACGGGACGCCAGTCCTTTGGCTTCGTTCCGCTGGCTCCTTC < 41bp 0.749292215558461 0.522245751291797 0.25119704 0.20830423 prediction 0.454092928533328 Functional Loss - PSMC5 ENSG00000087191 UTR5 Human protein_coding chr17:61905163 chr17:61905165 . . 0 23 hm5C_associated_SNPs_76972 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:61905145-61905183
64251 chr4 7055912 7055912 1 + G A STAD 7055909 + 7055889 7055929 41 TCCCCGACACCATCCCCAACCGCGTGACAGACCACACCTGT TCCCCGACACCATCCCCAACCGCATGACAGACCACACCTGT < 41bp 0.747751117999969 0.520704730854864 0.35131907 0.20204201 prediction 0.45409277429021 Functional Loss - TADA2B ENSG00000173011 CDS Human protein_coding chr4:7055909 chr4:7055912 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_76973 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:7055886-7055954
64251 chr8 11615857 11615857 1 + C T GBM 11615855 + 11615835 11615875 41 CCCTCCATCCACCCTGTCCTCTCGGCCCTGAAGCTCTCCCC CCCTCCATCCACCCTGTCCTCTTGGCCCTGAAGCTCTCCCC < 41bp 0.823727525284187 0.596681460888291 0.15826595 0.051532567 prediction 0.454092128791791 Functional Loss - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11615855 chr8:11615857 nonsynonymous SNV 0.605 2 23 hm5C_associated_SNPs_76974 0 0 2 BUD13 POSTAR2 ENCODE chr8:11615823-11615866
64251 chr16 72094525 72094525 1 + C T rs112933438 72094523 + 72094503 72094543 41 ATTATGAAGGCAGCACAGTCCCCGAAAAGAAGACACCGAAG ATTATGAAGGCAGCACAGTCCCTGAAAAGAAGACACCGAAG < 41bp 0.826171314307216 0.599130367489405 0.03126064 0.0214473 prediction 0.454081893635624 Functional Loss - HP ENSG00000257017 CDS Human protein_coding chr16:72094523 chr16:72094525 synonymous SNV . 0 23 hm5C_associated_SNPs_76975 0 0 2 RPS3 POSTAR2 ENCODE chr16:72094505-72094597
64251 chr5 43174846 43174846 1 + G T LUAD 43174844 + 43174824 43174864 41 GGTGGATTCAGCACAAGTGACTGTGGAACAAGTCCATCCAG GGTGGATTCAGCACAAGTGACTTTGGAACAAGTCCATCCAG < 41bp 0.727034869898501 0.409430591618448 0.1579501 0.22910911 prediction 0.454069739797002 Functional Loss - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43174844 chr5:43174846 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_76981 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:43174805-43174879
64251 chr2 99812108 99812108 1 + T C rs7572157 99812107 + 99812087 99812127 41 TAACACGTGCCTCAAAAGCACTGGGGAGTTAGTAGTGCAGT TAACACGTGCCTCAAAAGCACCGGGGAGTTAGTAGTGCAGT < 41bp 0.731916954909658 0.504882337094828 0.2657321 0.2526471 prediction 0.454069235629661 Functional Loss - MRPL30 ENSG00000185414;ENSG00000241962 CDS Human other chr2:99812107 chr2:99812108 synonymous SNV . 0 22 hm5C_associated_SNPs_76982 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:99812084-99812109
64251 chr1 236902625 236902625 1 + G A COAD 236902622 + 236902602 236902642 41 CTTTTGGAATGGATTCGTCGCACGATCCCCTGGCTGGAGAA CTTTTGGAATGGATTCGTCGCACAATCCCCTGGCTGGAGAA < 41bp 0.76513198648069 0.538098191795978 0.33523524 0.19167662 prediction 0.454067589369425 Functional Loss - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236902622 chr1:236902625 synonymous SNV . 0 24 hm5C_associated_SNPs_76983 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:236902623-236902661
64251 chr3 119236143 119236143 1 + G T LUSC 119236140 + 119236120 119236160 41 AGAAGGATCGAAAGGCACTCCATGAGCTAAAACTGGAAGAG AGAAGGATCGAAAGGCACTCCATTAGCTAAAACTGGAAGAG < 41bp 0.727033425275738 0.337522287841983 0.07732996 0.055284888 prediction 0.454066850551476 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119236140 chr3:119236143 stopgain 0.608 0 24 hm5C_associated_SNPs_76985 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:119236072-119236147
64251 chr12 101017384 101017384 1 + G A LUAD 101017381 + 101017361 101017401 41 ATGGTTCGCGTTGGTGGAGGCTGGGATACTCTTCAAGGATT ATGGTTCGCGTTGGTGGAGGCTGAGATACTCTTCAAGGATT < 41bp 0.737535615110991 0.510502596918166 0.5726725 0.29462084 prediction 0.454066036385649 Functional Loss - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017381 chr12:101017384 stopgain 1.000 1 24 hm5C_associated_SNPs_76986 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr12:101017370-101017397
64251 chr1 33764619 33764619 1 + G T CESC 33764617 + 33764597 33764637 41 CCCCAGAGGACGGAGTCCCCCGGCATCCCGGTGCGAATCTC CCCCAGAGGACGGAGTCCCCCGTCATCCCGGTGCGAATCTC < 41bp 0.892365667508194 0.665332898389525 0.66740257 0.106978 prediction 0.454065538237339 Functional Loss - ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33764617 chr1:33764619 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_76987 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:33764602-33764631
64251 chr3 133485204 133485204 1 + G C LUSC 133485203 + 133485183 133485223 41 AGGCAAGAAGTCCTGCCATACGGCAGTTGGCAGAACCGCTG AGGCAAGAAGTCCTGCCATACCGCAGTTGGCAGAACCGCTG < 41bp 0.885840345351717 0.658815404656134 0.28240138 0.37680387 prediction 0.454049881391166 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133485203 chr3:133485204 synonymous SNV . 0 22 hm5C_associated_SNPs_76994 0 0 7 DHX30 POSTAR2 ENCODE chr3:133485161-133485250
64251 chr10 95278683 95278683 1 + G A rs75139274 95278680 + 95278660 95278700 41 AAAGCAGCAAGAAGAACAAACAAGGGTAGCTCTGTTGGAAC AAAGCAGCAAGAAGAACAAACAAAGGTAGCTCTGTTGGAAC < 41bp 0.727017381938562 0.485768612836095 0.9405873 0.9200947 prediction 0.454034763877124 Functional Loss - CEP55 ENSG00000138180 CDS Human protein_coding chr10:95278680 chr10:95278683 nonsynonymous SNV 0.829 1 24 hm5C_associated_SNPs_76999 0 0 2 UCHL5 POSTAR2 ENCODE chr10:95278633-95278685
64251 chr16 4383476 4383476 1 + G A CESC 4383473 + 4383453 4383493 41 ATGGCAGCAGCTCGCTGTCCCCCGAGCGCCAGGGCAACGGG ATGGCAGCAGCTCGCTGTCCCCCAAGCGCCAGGGCAACGGG < 41bp 0.791706308410114 0.564689755708846 0.051438928 0.034085542 prediction 0.454033105402538 Functional Loss - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4383473 chr16:4383476 nonsynonymous SNV 0.965 4 24 hm5C_associated_SNPs_77000 0 0 1 DGCR8 POSTAR2 ENCODE chr16:4383446-4383477
64251 chr16 8941653 8941653 1 + C T rs142459706 8941651 + 8941631 8941671 41 CGTGACAGCGCCTGAGGACACGCGCAGGATCTGTGAACTGC CGTGACAGCGCCTGAGGACACGTGCAGGATCTGTGAACTGC < 41bp 0.814571374275298 0.587557353356152 0.021927387 0.0755814 prediction 0.454028041838291 Functional Loss - PMM2 ENSG00000140650 CDS Human protein_coding chr16:8941651 chr16:8941653 nonsynonymous SNV 0.265 2 23 hm5C_associated_SNPs_77001 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8941603-8941680
64251 chr9 136307846 136307846 1 + T C UCEC 136307845 + 136307825 136307865 41 CGTGGCCAGAGGCCTGCGTGCTCGAACCCTGCCCTCCCTAG CGTGGCCAGAGGCCTGCGTGCCCGAACCCTGCCCTCCCTAG < 41bp 0.763674286257353 0.536665776369376 0.18051824 0.113863766 prediction 0.454017019775955 Functional Loss - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136307845 chr9:136307846 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_77004 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:136307846-136307872
64251 chr7 129094344 129094344 1 + C T LUSC 129094342 + 129094322 129094362 41 CCCCTGTGGGTGGAGAACAGCCCGGGAGACCTTCCGCACTG CCCCTGTGGGTGGAGAACAGCCTGGGAGACCTTCCGCACTG < 41bp 0.833680448370625 0.606679841385724 0.85065675 0.53670764 prediction 0.454001213969803 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129094342 chr7:129094344 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_77010 0 0 3 DDX24 POSTAR2 ENCODE chr7:129094298-129094363
64251 chr2 74687380 74687380 1 + G C HNSC 74687379 + 74687359 74687399 41 ACCTTCAAGCCCCCAGCCTACGAGGATGTGGTTCACCGCCC ACCTTCAAGCCCCCAGCCTACCAGGATGTGGTTCACCGCCC < 41bp 0.883374844681108 0.656376032897101 0.84691155 0.32510966 prediction 0.453997623568016 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687379 chr2:74687380 nonsynonymous SNV 0.983 3 22 hm5C_associated_SNPs_77011 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:74687360-74687380
64251 chr10 99211553 99211553 1 + T C STAD 99211552 + 99211532 99211572 41 GGTCTAGTACAGCGCTGGCGCTACGGCAAGGTCTGCCTGCG GGTCTAGTACAGCGCTGGCGCCACGGCAAGGTCTGCCTGCG < 41bp 0.785794713078216 0.558800934432821 0.3038991 0.46642277 prediction 0.453987557290788 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211552 chr10:99211553 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_77014 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr10:99211502-99211559
64251 chrX 149814302 149814302 1 + C T CESC 149814299 + 149814279 149814319 41 AATAAACAAATTTCTAAACTCACCATTTATGATGCAAGACC AATAAACAAATTTCTAAACTCACTATTTATGATGCAAGACC < 41bp 0.726993755825216 0.497321301497549 0.19498497 0.30675498 prediction 0.453987511650432 Functional Loss - MTM1 ENSG00000171100 CDS Human protein_coding chrX:149814299 chrX:149814302 synonymous SNV . 0 24 hm5C_associated_SNPs_77015 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:149814275-149814309
64251 chr6 7727766 7727766 1 + G A UCEC 7727763 + 7727743 7727783 41 GAGCCTTCTGGCCCCCGGATCTGGCAGCGGCGGCGCGTCCC GAGCCTTCTGGCCCCCGGATCTGACAGCGGCGGCGCGTCCC < 41bp 0.802409812498795 0.575416658981383 0.42895716 0.22228119 prediction 0.453986307034824 Functional Loss - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7727763 chr6:7727766 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_77016 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7727740-7727805
64251 chr3 191097987 191097987 1 + C T COAD 191097984 + 191097964 191098004 41 GATGAAAGAAGCTGTATCTACTCCATCACGAATGGCCCACA GATGAAAGAAGCTGTATCTACTCTATCACGAATGGCCCACA < 41bp 0.726990663792078 0.493735633478234 0.90634656 0.59810424 prediction 0.453981327584156 Functional Loss - CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191097984 chr3:191097987 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_77018 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:191097971-191097987
64251 chr5 6750570 6750570 1 + C T BLCA 6750567 + 6750547 6750587 41 GTCCAGCCCCCAGCTCCTGTCTTCAGGCTCCTCGGCCTCTT GTCCAGCCCCCAGCTCCTGTCTTTAGGCTCCTCGGCCTCTT < 41bp 0.741439664786684 0.514452788285866 0.2586339 0.15748087 prediction 0.453973753001637 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750567 chr5:6750570 nonsynonymous SNV 0.209 1 24 hm5C_associated_SNPs_77020 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:6750535-6750595
64251 chr11 64128048 64128048 1 + T C UCEC 64128047 + 64128027 64128067 41 GGGGTGAGATCGTGCTGGCCCTGGAACACCTGCACAAGGTG GGGGTGAGATCGTGCTGGCCCCGGAACACCTGCACAAGGTG < 41bp 0.780353382501205 0.553368638169525 0.5112646 0.72756004 prediction 0.453969488663359 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128047 chr11:64128048 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_77022 0 0 4 BUD13 POSTAR2 ENCODE chr11:64128023-64128126
64251 chr1 2519892 2519892 1 + G A UCEC 2519889 + 2519869 2519909 41 CCCGTGCGTGATGTGGCTGCCAAGGTGTGTGCGGGTCAAGG CCCGTGCGTGATGTGGCTGCCAAAGTGTGTGCGGGTCAAGG < 41bp 0.748089021200738 0.521114073545679 0.521025 0.35387024 prediction 0.453949895310116 Functional Loss - FAM213B ENSG00000157870 CDS Human protein_coding chr1:2519889 chr1:2519892 synonymous SNV . 0 24 hm5C_associated_SNPs_77025 0 0 2 DDX3X POSTAR2 ENCODE chr1:2519873-2519893
64251 chr22 44372652 44372652 1 + G A UCEC 44372649 + 44372629 44372669 41 GCACGCCATGGTCATCGATTCTCGGAATTCTTCCATCTTAC GCACGCCATGGTCATCGATTCTCAGAATTCTTCCATCTTAC < 41bp 0.726965496728264 0.482406411706974 0.59271187 0.15408158 prediction 0.453930993456528 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44372649 chr22:44372652 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77027 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr22:44372639-44372666
64251 chr6 16254927 16254927 1 + G A BLCA 16254924 + 16254904 16254944 41 TCAGAACATTTTGTGGAATTCGTGAAACTTGTCCGTGCCAA TCAGAACATTTTGTGGAATTCGTAAAACTTGTCCGTGCCAA < 41bp 0.729048084189791 0.502085444667896 0.20274016 0.11419928 prediction 0.45392527904379 Functional Loss - GMPR ENSG00000137198 CDS Human protein_coding chr6:16254924 chr6:16254927 synonymous SNV . 0 24 hm5C_associated_SNPs_77031 0 0 1 SUB1 POSTAR2 ENCODE chr6:16254921-16254963
64251 chr7 128852511 128852511 1 + G A rs41274236 128852508 + 128852488 128852528 41 CTCACCCCAGGGACAGGGCCCTGGAGCTCAGGGTCCTTGTT CTCACCCCAGGGACAGGGCCCTGAAGCTCAGGGTCCTTGTT < 41bp 0.790407679957549 0.563449975367245 0.6359422 0.6202329 prediction 0.453915409180607 Functional Loss - SMO ENSG00000243230 ncRNA_intronic Human antisense chr7:128852508 chr7:128852511 . . 0 24 hm5C_associated_SNPs_77036 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:128852471-128852511
64251 chr20 35125326 35125326 1 + C T STAD 35125324 + 35125304 35125344 41 TACCCGACCGCCCAGCGTGACACGGGGTGGAGTCGCCCCAG TACCCGACCGCCCAGCGTGACATGGGGTGGAGTCGCCCCAG < 41bp 0.819824914004837 0.592867679850667 0.8142939 0.9016206 prediction 0.453914468308339 Functional Loss - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35125324 chr20:35125326 nonsynonymous SNV 0.524 3 23 hm5C_associated_SNPs_77037 0 0 1 GRWD1 POSTAR2 ENCODE chr20:35125243-35125375
64251 chr16 88874626 88874626 1 + G A rs77893539 88874623 + 88874603 88874643 41 TACGTCAAGCTGGACAAGGCCGCGGACCTCGCCCACATCAC TACGTCAAGCTGGACAAGGCCGCAGACCTCGCCCACATCAC < 41bp 0.763410421533285 0.536459221163291 0.5380019 0.32296246 prediction 0.453902400739986 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874623 chr16:88874626 synonymous SNV . 0 24 hm5C_associated_SNPs_77039 1 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:88874569-88874629
64251 chr5 159912420 159912420 1 + G T UCEC 159912418 + 159912398 159912438 41 GTTGTGTCAGTGTCAGACCTCTGAAATTCAGTTCTTCAGCT GTTGTGTCAGTGTCAGACCTCTTAAATTCAGTTCTTCAGCT < 41bp 0.726950533287813 0.411904790695941 0.77679807 0.8142088 prediction 0.453901066575625 Functional Loss - MIR146A;MIR3142HG ENSG00000253522 ncRNA_exonic Human lincRNA chr5:159912418 chr5:159912420 . . 0 23 hm5C_associated_SNPs_77041 0 0 2 DGCR8 POSTAR2 ENCODE chr5:159912386-159912437
64251 chr22 40802522 40802522 1 + G A UCEC 40802519 + 40802499 40802539 41 ATCCCGTCGCAGATGGAGGACGCGGAGCTGCTTCTGGGGGT ATCCCGTCGCAGATGGAGGACGCAGAGCTGCTTCTGGGGGT < 41bp 0.790101347640005 0.563151402630506 0.4277982 0.23958632 prediction 0.453899890018997 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802519 chr22:40802522 synonymous SNV . 0 24 hm5C_associated_SNPs_77042 0 0 1 SRSF7 POSTAR2 ENCODE chr22:40802505-40802571
64251 chr2 113325622 113325622 1 + G T LUSC 113325620 + 113325600 113325640 41 AGGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTTACCA AGGAAAACCAAGTCTGTACCCATGATTGTTCCTTTTTACCA < 41bp 0.893502077783662 0.666553295571708 0.9150293 0.34792218 prediction 0.453897564423908 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113325620 chr2:113325622 stopgain 1.000 1 23 hm5C_associated_SNPs_77043 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113325609-113325625
64251 chr6 138200288 138200288 1 + G A UCEC 138200285 + 138200265 138200305 41 GCGTTCCAAGTCAGATCCCTCGCGGCTCGTCCGGAGCCCCT GCGTTCCAAGTCAGATCCCTCGCAGCTCGTCCGGAGCCCCT < 41bp 0.790480607305139 0.563540214392372 0.54424214 0.1862118 prediction 0.453880785825534 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200285 chr6:138200288 nonsynonymous SNV 0.046 0 24 hm5C_associated_SNPs_77046 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:138200274-138200317
64251 chr5 76129488 76129488 1 + G A SKCM 76129485 + 76129465 76129505 41 TACTTTGTTTCACATGATTTCAGGGATCATGCAAAGAACGC TACTTTGTTTCACATGATTTCAGAGATCATGCAAAGAACGC < 41bp 0.745866545403395 0.518940250376948 0.890426 0.53008264 prediction 0.453852590052894 Functional Loss - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76129485 chr5:76129488 synonymous SNV . 0 24 hm5C_associated_SNPs_77052 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:76129400-76129491
64251 chr20 62783241 62783241 1 + C T rs4809257 62783239 + 62783219 62783259 41 AACCGGTGGCAGAATGTTCCCGCGTTTCTGGTCCTCATCAG AACCGGTGGCAGAATGTTCCCGTGTTTCTGGTCCTCATCAG < 41bp 0.746032843319784 0.519107126522332 0.38317007 0.27639467 prediction 0.453851433594904 Functional Loss - NPBWR2;MYT1 ENSG00000196132 UTR5 Human protein_coding chr20:62783239 chr20:62783241 . . 0 23 hm5C_associated_SNPs_77053 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr20:62783232-62783257
64251 chr10 5948356 5948356 1 + C T COAD 5948354 + 5948334 5948374 41 AGAAGCAGAGGACAGTACGTCTCGGCTCTCTGCGGAGTCTG AGAAGCAGAGGACAGTACGTCTTGGCTCTCTGCGGAGTCTG < 41bp 0.820147994878036 0.593226571722666 0.10203859 0.031955928 prediction 0.453842846310741 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948354 chr10:5948356 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_77059 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5948344-5948365
64251 chr1 89150278 89150278 1 + C T MESO 89150276 + 89150256 89150296 41 GGAGCGCAATGGCGTCCAACCCCGAACGGGGGGAGATTCTG GGAGCGCAATGGCGTCCAACCCTGAACGGGGGGAGATTCTG < 41bp 0.804160695727448 0.577243286497365 0.074804395 0.029564083 prediction 0.453834818460167 Functional Loss - PKN2 ENSG00000065243 CDS Human protein_coding chr1:89150276 chr1:89150278 synonymous SNV . 0 23 hm5C_associated_SNPs_77061 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:89150278-89150301
64251 chr3 33174168 33174168 1 + G A rs1135128 33174165 + 33174145 33174185 41 CACAGGGACACTTGGGGCCTCTCGGATGAGCACTTCCAGCC CACAGGGACACTTGGGGCCTCTCAGATGAGCACTTCCAGCC < 41bp 0.776468534714175 0.549559962064911 0.82639897 0.8451538 prediction 0.453817145298527 Functional Loss - CRTAP ENSG00000170275 CDS Human protein_coding chr3:33174165 chr3:33174168 synonymous SNV . 0 24 hm5C_associated_SNPs_77069 2 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:33174147-33174170
64251 chr16 29857217 29857217 1 + C T STAD 29857215 + 29857195 29857235 41 AGAGACTGGAGCAGGAAGCCCGCGGCCGGCTTGAGCGGCAG AGAGACTGGAGCAGGAAGCCCGTGGCCGGCTTGAGCGGCAG < 41bp 0.826734892417076 0.599835767940272 0.7455972 0.47758368 prediction 0.453798248953609 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29857215 chr16:29857217 synonymous SNV . 0 23 hm5C_associated_SNPs_77073 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29857206-29857235
64251 chr2 192265163 192265163 1 + C T UCEC 192265161 + 192265141 192265181 41 AAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTG AAGCGCTGTAAGGAAGCAGTCATGACCATTGCTGCATATTG < 41bp 0.726894618674179 0.432462599008259 0.13819104 0.13883218 prediction 0.453789237348358 Functional Loss - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192265161 chr2:192265163 nonsynonymous SNV 0.990 2 23 hm5C_associated_SNPs_77074 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:192265118-192265176
64251 chr19 46025462 46025462 1 + G A UCEC 46025459 + 46025439 46025479 41 CCGTCGGAGCACATAGAGCGCCGGGTCTCCAATGCAGGTGA CCGTCGGAGCACATAGAGCGCCGAGTCTCCAATGCAGGTGA < 41bp 0.726887563839302 0.476085767027526 0.7870311 0.05820021 prediction 0.453775127678604 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46025459 chr19:46025462 synonymous SNV . 0 24 hm5C_associated_SNPs_77078 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585675 chr19:46025449-46025472
64251 chr5 138268273 138268273 1 + G A UCEC 138268270 + 138268250 138268290 41 GCCTGCTCTCTCTTCAGTGCCCCGACTCGGCTTGCAAGCAG GCCTGCTCTCTCTTCAGTGCCCCAACTCGGCTTGCAAGCAG < 41bp 0.726885989144751 0.490103644987216 0.16297105 0.12269139 prediction 0.453771978289503 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138268270 chr5:138268273 nonsynonymous SNV 0.911 2 24 hm5C_associated_SNPs_77080 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:138268273-138268274
64251 chr10 70968575 70968575 1 + T C LIHC 70968574 + 70968554 70968594 41 AAGGACACGCGGCACCAAAGCTCTAGGGAGTAAAGCTACTG AAGGACACGCGGCACCAAAGCCCTAGGGAGTAAAGCTACTG < 41bp 0.801232316609642 0.574348953499414 0.33384645 0.10204199 prediction 0.453766726220457 Functional Loss - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968574 chr10:70968575 synonymous SNV . 0 22 hm5C_associated_SNPs_77081 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70968571-70968610
64251 chr3 38565619 38565619 1 + G A COAD 38565616 + 38565596 38565636 41 TTGGATAGAACTAGTGATATCCGGAATATCTGCTCTGTGGA TTGGATAGAACTAGTGATATCCGAAATATCTGCTCTGTGGA < 41bp 0.729696998986656 0.502816373200709 0.88202965 0.43411106 prediction 0.453761251571894 Functional Loss - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565616 chr3:38565619 synonymous SNV . 0 24 hm5C_associated_SNPs_77083 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38565534-38565655
64251 chr20 5990444 5990444 1 + G T GBM 5990441 + 5990421 5990461 41 TATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGAC TATGAAAACCCATGGACAATCCCTAATATGTTGTCAATGAC < 41bp 0.72687908236523 0.348098083293481 0.2554171 0.117923945 prediction 0.453758164730459 Functional Loss - CRLS1 ENSG00000088766 CDS Human protein_coding chr20:5990441 chr20:5990444 synonymous SNV . 0 24 hm5C_associated_SNPs_77084 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:5990437-5990479
64251 chr20 5990443 5990443 1 + C T LUSC 5990441 + 5990421 5990461 41 TATGAAAACCCATGGACAATCCCGAATATGTTGTCAATGAC TATGAAAACCCATGGACAATCCTGAATATGTTGTCAATGAC < 41bp 0.72687908236523 0.435469316872725 0.2554171 0.24370605 prediction 0.453758164730459 Functional Loss - CRLS1 ENSG00000088766 CDS Human protein_coding chr20:5990441 chr20:5990443 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_77085 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:5990418-5990443
64251 chr2 131890529 131890529 1 + C T SKCM 131890527 + 131890507 131890547 41 GACATCCGTGGTTTCCTCACCTCCACCATACACGGCCTATG GACATCCGTGGTTTCCTCACCTTCACCATACACGGCCTATG < 41bp 0.726878958078919 0.445433218621388 0.87216413 0.06344545 prediction 0.453757916157838 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131890527 chr2:131890529 nonsynonymous SNV 0.003 2 23 hm5C_associated_SNPs_77086 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:131890507-131890540
64251 chr2 131890528 131890528 1 + T C STAD 131890527 + 131890507 131890547 41 GACATCCGTGGTTTCCTCACCTCCACCATACACGGCCTATG GACATCCGTGGTTTCCTCACCCCCACCATACACGGCCTATG < 41bp 0.726878958078919 0.461080342144683 0.87216413 0.09242797 prediction 0.453757916157838 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131890527 chr2:131890528 synonymous SNV . 0 22 hm5C_associated_SNPs_77087 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:131890503-131890528
64251 chr11 67053770 67053770 1 + G T rs1131563 67053767 + 67053747 67053787 41 CTATCAGTGTGCCCCCCATCCTGGCCCATCAGTGTACCCCC CTATCAGTGTGCCCCCCATCCTGTCCCATCAGTGTACCCCC < 41bp 0.726875850007757 0.387585565162973 0.6990584 0.25728545 prediction 0.453751700015513 Functional Loss - GRK2 ENSG00000173020 UTR3 Human protein_coding chr11:67053767 chr11:67053770 . . 0 24 hm5C_associated_SNPs_77089 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:67053739-67053793
64251 chr2 101587467 101587467 1 + G A SKCM 101587464 + 101587444 101587484 41 CTGTACAGTTACGCAGATGTCCGGGTGGAAAGGAGGCAGGA CTGTACAGTTACGCAGATGTCCGAGTGGAAAGGAGGCAGGA < 41bp 0.777689000934716 0.550817227415404 0.9166081 0.545586 prediction 0.453743547038624 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101587464 chr2:101587467 synonymous SNV . 0 24 hm5C_associated_SNPs_77094 0 0 3 PPIG POSTAR2 ENCODE chr2:101587444-101587543
64251 chr6 26597328 26597328 1 + A T KIRP 26597324 + 26597304 26597344 41 TCCGAAGAAGCGGCCTGTGGCAGCAAGAAACGGGTAGTGCC TCCGAAGAAGCGGCCTGTGGCAGCTAGAAACGGGTAGTGCC < 41bp 0.877316917557601 0.650446335418485 0.4578528 0.42624718 prediction 0.453741164278232 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26597324 chr6:26597328 stopgain 0.415 0 25 hm5C_associated_SNPs_77095 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:26597327-26597328
64251 chrX 48121246 48121246 1 + C T UCEC 48121244 + 48121224 48121264 41 GGCAGGCTCCACAGAATCATCCCGAAGGTGAGTATCTCTCA GGCAGGCTCCACAGAATCATCCTGAAGGTGAGTATCTCTCA < 41bp 0.833275271817777 0.606409355377515 0.20550823 0.08873659 prediction 0.453731832880524 Functional Loss - SSX1 ENSG00000126752 CDS Human protein_coding chrX:48121244 chrX:48121246 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_77099 0 0 1 ZNF622 POSTAR2 ENCODE chrX:48121201-48121248
64251 chr19 11350343 11350343 1 + G T UCEC 11350340 + 11350320 11350360 41 GTGCCTGCTCTGTGCCTGCTCTGGGCCCTGGCAATGGTGAC GTGCCTGCTCTGTGCCTGCTCTGTGCCCTGGCAATGGTGAC < 41bp 0.7268484609421 0.344187205663158 0.37430954 0.066536754 prediction 0.453696921884201 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350340 chr19:11350343 nonsynonymous SNV 0.167 1 24 hm5C_associated_SNPs_77107 0 0 6 DDX3X POSTAR2 ENCODE chr19:11350309-11350415
64251 chr1 161479719 161479719 1 + G A LUAD 161479716 + 161479696 161479736 41 CTGGTCAAGGTCACATTCTTCCAGAATGGAAAATCCCAGAA CTGGTCAAGGTCACATTCTTCCAAAATGGAAAATCCCAGAA < 41bp 0.765806173061448 0.538959400042954 0.21160245 0.19141519 prediction 0.453693546036989 Functional Loss - FCGR2A ENSG00000143226 CDS Human protein_coding chr1:161479716 chr1:161479719 synonymous SNV . 0 24 hm5C_associated_SNPs_77108 0 0 1 SND1 POSTAR2 ENCODE chr1:161479719-161479799
64251 chr1 227946777 227946777 1 + G A UCEC 227946774 + 227946754 227946794 41 ACACCACCGGAAACAAAGCCCAGGGAAGATGTCTCCATGAC ACACCACCGGAAACAAAGCCCAGAGAAGATGTCTCCATGAC < 41bp 0.741720013064549 0.514874868072318 0.62360543 0.33158326 prediction 0.453690289984462 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227946774 chr1:227946777 synonymous SNV . 0 24 hm5C_associated_SNPs_77110 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:227946736-227946873
64251 chr1 40214601 40214601 1 + G A BLCA 40214598 + 40214578 40214618 41 ATTTCCGCTGCCTGTGCACTCATGAAAAGGGCTTTGGCTTT ATTTCCGCTGCCTGTGCACTCATAAAAAGGGCTTTGGCTTT < 41bp 0.726844450912682 0.496743273982315 0.35738575 0.16283524 prediction 0.453688901825364 Functional Loss - PPIE ENSG00000084072 CDS Human protein_coding chr1:40214598 chr1:40214601 nonsynonymous SNV 0.734 4 24 hm5C_associated_SNPs_77111 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:40214571-40214601
64251 chr11 114278448 114278448 1 + G T STAD 114278445 + 114278425 114278465 41 GATGATTTCTTCTATGAAGACAGGAATCATGATGACTGGAG GATGATTTCTTCTATGAAGACAGTAATCATGATGACTGGAG < 41bp 0.901465384657066 0.674641195208657 0.3682726 0.56049776 prediction 0.453648378896817 Functional Loss - RBM7 ENSG00000076053 CDS Human protein_coding chr11:114278445 chr11:114278448 nonsynonymous SNV 0.791 3 24 hm5C_associated_SNPs_77119 0 0 14 WDR33 POSTAR2 GSE61123,GSM1496985 chr11:114278417-114278451
64251 chr19 2810444 2810444 1 + G A COAD 2810441 + 2810421 2810461 41 CCGCACAGGCAGCGCCGTGCCCCGGGAGCTCCTGGAGAAGC CCGCACAGGCAGCGCCGTGCCCCAGGAGCTCCTGGAGAAGC < 41bp 0.765903760928351 0.539081032413081 0.07004157 0.02351427 prediction 0.45364545703054 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810441 chr19:2810444 nonsynonymous SNV 0.057 0 24 hm5C_associated_SNPs_77120 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:2810429-2810457
64251 chr1 150131408 150131408 1 + G A PRAD 150131405 + 150131385 150131425 41 CCCCAACCCGGGGCAGCTGTCCCGGATCCAGGACCTGGTAG CCCCAACCCGGGGCAGCTGTCCCAGATCCAGGACCTGGTAG < 41bp 0.777599090706368 0.550776485418355 0.84408045 0.39555416 prediction 0.453645210576027 Functional Loss - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131405 chr1:150131408 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_77121 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131400-150131422
64251 chr16 3071909 3071909 1 + G A BLCA 3071906 + 3071886 3071926 41 GCCAGTCTCTGCCTCCCAGACGCGGCGGGAGCCAAGCTCCT GCCAGTCTCTGCCTCCCAGACGCAGCGGGAGCCAAGCTCCT < 41bp 0.784072758248577 0.55725072463984 0.1260975 0.08035421 prediction 0.453644067217473 Functional Loss - TNFRSF12A ENSG00000006327 CDS Human protein_coding chr16:3071906 chr16:3071909 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_77122 0 0 3 IGF2BP1 POSTAR2 ENCODE chr16:3071871-3071910
64251 chr22 39917531 39917531 1 + T C SKCM 39917530 + 39917510 39917550 41 CGACCAGTCGGGTTTGGGGGCTGAAGAAAGCCTAGGTCTCT CGACCAGTCGGGTTTGGGGGCCGAAGAAAGCCTAGGTCTCT < 41bp 0.726812943670318 0.496752069725758 0.86229944 0.88664055 prediction 0.453625887340637 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917530 chr22:39917531 synonymous SNV . 0 22 hm5C_associated_SNPs_77127 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:39917520-39917560
64251 chr9 34343411 34343411 1 + C T UCEC 34343409 + 34343389 34343429 41 AGGCAGCGCTCCAAGAAGGACACCAGTTTCTTTGCTCCATA AGGCAGCGCTCCAAGAAGGACATCAGTTTCTTTGCTCCATA < 41bp 0.836422585666361 0.609611326192817 0.41196755 0.56657994 prediction 0.453622518947087 Functional Loss - NUDT2 ENSG00000164978 CDS Human protein_coding chr9:34343409 chr9:34343411 synonymous SNV . 0 23 hm5C_associated_SNPs_77129 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:34343407-34343430
64251 chr8 128750933 128750933 1 + C T COAD 128750931 + 128750911 128750951 41 TGGAGCGGCTTCTCGGCCGCCGCCAAGCTCGTCTCAGAGAA TGGAGCGGCTTCTCGGCCGCCGTCAAGCTCGTCTCAGAGAA < 41bp 0.862067341384632 0.635261391931771 0.76602435 0.3398214 prediction 0.453611898905721 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128750931 chr8:128750933 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_77132 0 0 7 GEMIN5 POSTAR2 ENCODE chr8:128750897-128750959
64251 chrX 17768235 17768235 1 + C T BRCA 17768233 + 17768213 17768253 41 AGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCA AGCTGGAGGAGGACCCGATCCTTAGCCGCACTCCGAGTCCA < 41bp 0.821878127141043 0.595072421370599 0.15920633 0.042639166 prediction 0.453611411540888 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768233 chrX:17768235 synonymous SNV . 0 23 hm5C_associated_SNPs_77133 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr7 96747140 96747140 1 + G A BLCA 96747137 + 96747117 96747157 41 AAATCCCTGGGCGACCAGTACGTGAAAGACGAATTTAGGAG AAATCCCTGGGCGACCAGTACGTAAAAGACGAATTTAGGAG < 41bp 0.760124951456456 0.533328134108077 0.47006524 0.28354728 prediction 0.453593634696757 Functional Loss - SDHAF3 ENSG00000196636 CDS Human protein_coding chr7:96747137 chr7:96747140 synonymous SNV . 0 24 hm5C_associated_SNPs_77139 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:96747089-96747140
64251 chr1 150307438 150307438 1 + C T LIHC 150307435 + 150307415 150307455 41 GTTAAAAGACCAAACGAAACCTACACCACTGATCCTGGATG GTTAAAAGACCAAACGAAACCTATACCACTGATCCTGGATG < 41bp 0.728314856114745 0.501518521900358 0.1355538 0.09959754 prediction 0.453592668428773 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150307435 chr1:150307438 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_77141 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:150307417-150307454
64251 chr7 150741112 150741112 1 + G A UCEC 150741109 + 150741089 150741129 41 GAAGCAGCGCCTGGCCATCGCCCGAGCCCTTATCAAGCAGC GAAGCAGCGCCTGGCCATCGCCCAAGCCCTTATCAAGCAGC < 41bp 0.726791829987986 0.480074104807922 0.5408814 0.21970701 prediction 0.453583659975971 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150741109 chr7:150741112 nonsynonymous SNV 0.964 5 24 hm5C_associated_SNPs_77144 0 0 1 SND1 POSTAR2 ENCODE chr7:150741057-150741198
64251 chr22 39066939 39066939 1 + G A UCEC 39066936 + 39066916 39066956 41 CTGGGCTTGGAATACGGATCCCCGACTATGAACCTGGCAGG CTGGGCTTGGAATACGGATCCCCAACTATGAACCTGGCAGG < 41bp 0.788325969821176 0.561538536870753 0.07469264 0.12732318 prediction 0.453574865900846 Functional Loss - CBY1 ENSG00000100211 CDS Human protein_coding chr22:39066936 chr22:39066939 synonymous SNV . 0 24 hm5C_associated_SNPs_77147 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39066896-39066942
64251 chr1 15988105 15988105 1 + T C LUSC 15988104 + 15988084 15988124 41 CCACAGATATTGACCGCATTCTCCGTGCTGGCTTTACTTTG CCACAGATATTGACCGCATTCCCCGTGCTGGCTTTACTTTG < 41bp 0.78426157802033 0.557474921815195 0.2401858 0.11830068 prediction 0.453573312410269 Functional Loss - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15988104 chr1:15988105 nonsynonymous SNV 0.849 3 22 hm5C_associated_SNPs_77149 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:15988074-15988116
64251 chr19 1430334 1430334 1 + C T LUSC 1430332 + 1430312 1430352 41 TCCCCCTCCCCAGGGCTTCCCTCAGGGCTACGGTGCCCCGC TCCCCCTCCCCAGGGCTTCCCTTAGGGCTACGGTGCCCCGC < 41bp 0.825045676137233 0.59825920771364 0.82125497 0.4517094 prediction 0.453572936847186 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1430332 chr19:1430334 stopgain 0.997 1 23 hm5C_associated_SNPs_77150 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr19:1430286-1430334
64251 chr7 134221470 134221470 1 + G T UCEC 134221467 + 134221447 134221487 41 GTCTCCAATTTCAGCCACTTCCAGATCGAGAAGCTCTTGAA GTCTCCAATTTCAGCCACTTCCATATCGAGAAGCTCTTGAA < 41bp 0.726782425895917 0.332255283548321 0.2931881 0.117723286 prediction 0.453564851791834 Functional Loss - AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134221467 chr7:134221470 nonsynonymous SNV 0.837 4 24 hm5C_associated_SNPs_77153 0 0 1 RPS3 POSTAR2 ENCODE chr7:134221450-134221484
64251 chr16 675478 675478 1 + G T UCEC 675476 + 675456 675496 41 ACCAACCGCTGGTCCTTTGACGGCATCGACCGCTGGATCAA ACCAACCGCTGGTCCTTTGACGTCATCGACCGCTGGATCAA < 41bp 0.90375802979967 0.676977067628819 0.41950706 0.12326288 prediction 0.453561924341701 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:675476 chr16:675478 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_77156 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:675472-675491
64251 chr7 65551751 65551751 1 + G A UCEC 65551748 + 65551728 65551768 41 CAGCCACGCCGTGGCACTGACCCGAGACTCTGAGCGGCTGC CAGCCACGCCGTGGCACTGACCCAAGACTCTGAGCGGCTGC < 41bp 0.772937438506346 0.546158444191486 0.28018254 0.16132101 prediction 0.453557988629719 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65551748 chr7:65551751 nonsynonymous SNV 0.930 3 24 hm5C_associated_SNPs_77157 1 0 5 BUD13 POSTAR2 ENCODE chr7:65551724-65551812
64251 chr1 44456052 44456052 1 + C T LUAD 44456050 + 44456030 44456070 41 GTACCAGGTCTTGGAGGTGTCTCGGCAACCACTCTTCACCA GTACCAGGTCTTGGAGGTGTCTTGGCAACCACTCTTCACCA < 41bp 0.815417689676513 0.588638743234949 0.5490255 0.26683894 prediction 0.453557892883127 Functional Loss - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44456050 chr1:44456052 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_77158 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:44456040-44456060
64251 chr19 39955587 39955587 1 + G A UCEC 39955584 + 39955564 39955604 41 AACCAGCAGATGGTGCCCATCAAGGAGATGACAGACGTGCT AACCAGCAGATGGTGCCCATCAAAGAGATGACAGACGTGCT < 41bp 0.729235780159549 0.502481994589072 0.4246288 0.3175053 prediction 0.453507571140955 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39955584 chr19:39955587 synonymous SNV . 0 24 hm5C_associated_SNPs_77168 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:39955547-39955596
64251 chr15 44158934 44158934 1 + C T rs553846182 44158932 + 44158912 44158952 41 CCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTAAG CCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGACTCCTAAG < 41bp 0.797365303068039 0.570613412860739 0.21498209 0.18050364 prediction 0.4535037804146 Functional Loss - WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44158932 chr15:44158934 . . 0 23 hm5C_associated_SNPs_77170 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:44158882-44158950
64251 chr8 28876364 28876364 1 + G A UCEC 28876361 + 28876341 28876381 41 TCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGAC TCCCCCAGTCTCTGCCACATCTGATACTTTCCGACTGCGAC < 41bp 0.726746373911866 0.488702737660797 0.37394196 0.37949964 prediction 0.453492747823733 Functional Loss - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28876361 chr8:28876364 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_77175 0 0 6 DDX24 POSTAR2 ENCODE chr8:28876276-28876368
64251 chr19 731160 731160 1 + C T LUSC 731158 + 731138 731178 41 CCAGCCACTGCCAAGGAGAACGCGGCGGCCCCGAGCCCAGT CCAGCCACTGCCAAGGAGAACGTGGCGGCCCCGAGCCCAGT < 41bp 0.774277107988624 0.547534463083175 0.8527545 0.4720908 prediction 0.453485289810897 Functional Loss - PALM ENSG00000099864 CDS Human protein_coding chr19:731158 chr19:731160 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_77178 0 0 3 DDX24 POSTAR2 ENCODE chr19:731112-731161
64251 chr12 53509369 53509369 1 + G A UCEC 53509366 + 53509346 53509386 41 GCCCACGCCGTGGTGCTCTGCGCGCTGCCGGTCCACGTGGC GCCCACGCCGTGGTGCTCTGCGCACTGCCGGTCCACGTGGC < 41bp 0.795371144364196 0.568631858091263 0.21850753 0.18064728 prediction 0.453478572545865 Functional Loss - SOAT2 ENSG00000167780 CDS Human protein_coding chr12:53509366 chr12:53509369 synonymous SNV . 0 24 hm5C_associated_SNPs_77180 0 0 1 RPS3 POSTAR2 ENCODE chr12:53509341-53509384
64251 chr10 14939285 14939285 1 + T C LUAD 14939284 + 14939264 14939304 41 AAAATGTTGTCCTGCTGAAGCTGGAGTTCTTTTGGCTTATA AAAATGTTGTCCTGCTGAAGCCGGAGTTCTTTTGGCTTATA < 41bp 0.780667904783823 0.553933937927491 0.31697434 0.5992938 prediction 0.453467933712663 Functional Loss - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14939284 chr10:14939285 synonymous SNV . 0 22 hm5C_associated_SNPs_77185 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr10:14939254-14939297
64251 chr11 70052514 70052514 1 + A T HNSC 70052510 + 70052490 70052530 41 GTTCAGCAGGCCCGTGACCTCCAGAACAGGAGTGGGGCCAT GTTCAGCAGGCCCGTGACCTCCAGTACAGGAGTGGGGCCAT < 41bp 0.869536158077384 0.642802373431209 0.47701493 0.22194648 prediction 0.453467569292349 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70052510 chr11:70052514 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_77186 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:70052460-70052520
64251 chr5 150175109 150175109 1 + C T rs61736140 150175107 + 150175087 150175127 41 GCCACCATTGTCATCATGACCTCGTTGTTGCTGTGCCCAGC GCCACCATTGTCATCATGACCTTGTTGTTGCTGTGCCCAGC < 41bp 0.726732620630841 0.451671142277882 0.049187362 0.04910797 prediction 0.453465241261682 Functional Loss - SMIM3 ENSG00000256235 CDS Human protein_coding chr5:150175107 chr5:150175109 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_77192 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:150175104-150175136
64251 chr11 43469578 43469578 1 + G A ACC 43469575 + 43469555 43469595 41 AAAAACGTGACTACCAGCGTCTGGGATGGCCCAGCCCGGAC AAAAACGTGACTACCAGCGTCTGAGATGGCCCAGCCCGGAC < 41bp 0.761896295943822 0.53516369192772 0.31872547 0.16266999 prediction 0.453465208032206 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43469575 chr11:43469578 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77193 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:43469569-43469593
64251 chr1 156106916 156106916 1 + G T UCEC 156106914 + 156106894 156106934 41 TCCTCTCCAGATCTGGGCTGCAGGAGCTGGGGCCACCCACA TCCTCTCCAGATCTGGGCTGCATGAGCTGGGGCCACCCACA < 41bp 0.726731494866192 0.375413859203343 0.9006136 0.29358596 prediction 0.453462989732385 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156106914 chr1:156106916 stopgain 1.000 1 23 hm5C_associated_SNPs_77195 0 0 10 BUD13 POSTAR2 ENCODE chr1:156106884-156106953
64251 chr2 62450246 62450246 1 + T C LGG 62450245 + 62450225 62450265 41 CATCCCAGAAGTTGTTTACTCTGGCCTCTACCCACCCTATG CATCCCAGAAGTTGTTTACTCCGGCCTCTACCCACCCTATG < 41bp 0.726731144352242 0.498576291847595 0.6754044 0.87521565 prediction 0.453462288704483 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62450245 chr2:62450246 synonymous SNV . 0 22 hm5C_associated_SNPs_77196 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:62450235-62450264
64251 chr2 62450248 62450248 1 + G A UCEC 62450245 + 62450225 62450265 41 CATCCCAGAAGTTGTTTACTCTGGCCTCTACCCACCCTATG CATCCCAGAAGTTGTTTACTCTGACCTCTACCCACCCTATG < 41bp 0.726731144352242 0.4855338895939 0.6754044 0.43478456 prediction 0.453462288704483 Functional Loss - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62450245 chr2:62450248 nonsynonymous SNV 0.771 4 24 hm5C_associated_SNPs_77197 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:62450235-62450264
64251 chr6 43139817 43139817 1 + G T UCEC 43139815 + 43139795 43139835 41 CCAAGCCGGGTAAGAAGACCCGGGGCCGCGTGAAGATCAAG CCAAGCCGGGTAAGAAGACCCGTGGCCGCGTGAAGATCAAG < 41bp 0.726718600070768 0.370069256784174 0.8175905 0.21407646 prediction 0.453437200141536 Functional Loss - SRF ENSG00000112658 CDS Human protein_coding chr6:43139815 chr6:43139817 synonymous SNV . 0 23 hm5C_associated_SNPs_77202 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:43139808-43139835
64251 chr4 186260653 186260653 1 + A C STAD 186260652 + 186260632 186260672 41 GGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTAGTTTT GGCATGTGGAAAGCCTCCATCCCCAGTGGAGAGGTAGTTTT < 41bp 0.795451594640118 0.568733527497775 0.5448116 0.4044635 prediction 0.453436134284687 Functional Loss - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186260652 chr4:186260653 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_77204 0 0 1 PPIG POSTAR2 ENCODE chr4:186260583-186260663
64251 chr16 69832624 69832624 1 + G A UCEC 69832621 + 69832601 69832641 41 CAAGGTGCATAATCGTCAACCTCGAATTAACTCCTACGTGG CAAGGTGCATAATCGTCAACCTCAAATTAACTCCTACGTGG < 41bp 0.757746157238782 0.531031186827265 0.19175234 0.27598083 prediction 0.453429940823035 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69832621 chr16:69832624 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_77205 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:69832607-69832637
64251 chr19 8438778 8438778 1 + G A rs61512436 8438775 + 8438755 8438795 41 AGAGGCAGCCTCCTAGCGTCCTGGCTGGGCCTGGTCCCAGG AGAGGCAGCCTCCTAGCGTCCTGACTGGGCCTGGTCCCAGG < 41bp 0.771034505882608 0.544320530298922 0.09566668 0.041112483 prediction 0.453427951167371 Functional Loss - ANGPTL4 ENSG00000167772 UTR3 Human protein_coding chr19:8438775 chr19:8438778 . . 0 24 hm5C_associated_SNPs_77206 0 0 1 SND1 POSTAR2 ENCODE chr19:8438685-8438797
64251 chr12 53448150 53448150 1 - C G LIHC 53448151 - 53448131 53448171 41 GCCCCGGTGCCGCTGTTCATCGGGCCGCGCGGGGAAGGCGG GCCCCGGTGCCGCTGTTCATCCGGCCGCGCGGGGAAGGCGG < 41bp 0.870880853714094 0.644168628541612 0.89235246 0.44365302 prediction 0.453424450344963 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53448151 chr12:53448150 synonymous SNV . 0 22 hm5C_associated_SNPs_77208 0 0 1 NCBP2 POSTAR2 ENCODE chr12:53448109-53448207
64251 chr11 64085809 64085809 1 + G T SARC 64085806 + 64085786 64085826 41 CAGTGAAGGAGAGTGGGCGTCTGGCGGGGTCCGCAGTTTCA CAGTGAAGGAGAGTGGGCGTCTGTCGGGGTCCGCAGTTTCA < 41bp 0.726709302314541 0.340468538454825 0.6241079 0.20942864 prediction 0.453418604629083 Functional Loss - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64085806 chr11:64085809 nonsynonymous SNV 0.191 1 24 hm5C_associated_SNPs_77213 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:64085780-64085820
64251 chr19 41828534 41828534 1 + G A PRAD 41828531 + 41828511 41828551 41 ACAACCCCGACTTCGACAACCTCGACATCGTGGCACGGGAT ACAACCCCGACTTCGACAACCTCAACATCGTGGCACGGGAT < 41bp 0.726708602574435 0.497610488034351 0.27482447 0.14031693 prediction 0.453417205148869 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41828531 chr19:41828534 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_77214 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:41828497-41828536
64251 chr12 56552228 56552228 1 + G C LUAD 56552227 + 56552207 56552247 41 GAGACGGGCAGGATTGGGGACGAGAGGCAGGAAGAGACGGG GAGACGGGCAGGATTGGGGACCAGAGGCAGGAAGAGACGGG < 41bp 0.876537690499934 0.649833165538302 0.8042096 0.7915255 prediction 0.453409049923265 Functional Loss - MYL6 ENSG00000092841 CDS Human protein_coding chr12:56552227 chr12:56552228 nonsynonymous SNV 0.029 1 22 hm5C_associated_SNPs_77220 0 0 9 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr12:56552200-56552240
64251 chr17 78973280 78973280 1 + G A rs560447837 78973277 + 78973257 78973297 41 TTCCCCTGCAGTCCCAGCCCCGCGTGGCTCGCGCTCGTCTG TTCCCCTGCAGTCCCAGCCCCGCATGGCTCGCGCTCGTCTG < 41bp 0.774164829624471 0.547463378501079 0.74375314 0.22546643 prediction 0.453402902246783 Functional Loss - CHMP6 ENSG00000176108 UTR3 Human protein_coding chr17:78973277 chr17:78973280 . . 0 24 hm5C_associated_SNPs_77221 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:78973280-78973300
64251 chr1 9649091 9649091 1 + A C rs562921900 9649087 + 9649067 9649107 41 GCGGCCGGCGTGTTGCTCTACCGGATCGCGCGGAGGTGAGT GCGGCCGGCGTGTTGCTCTACCGGCTCGCGCGGAGGTGAGT < 41bp 0.726681638845301 0.354604431433545 0.13087496 0.08316013 prediction 0.453363277690602 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9649087 chr1:9649091 nonsynonymous SNV 0.979 0 25 hm5C_associated_SNPs_77234 0 0 1 DDX3X POSTAR2 ENCODE chr1:9648993-9649094
64251 chr1 155300265 155300265 1 + T C STAD 155300264 + 155300244 155300284 41 GCTTCCGGCGTGGGGAAGTGCTGCGTGTCATCACCACAGTG GCTTCCGGCGTGGGGAAGTGCCGCGTGTCATCACCACAGTG < 41bp 0.73024174647578 0.503567083509974 0.33745918 0.51924765 prediction 0.453349325931611 Functional Loss - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155300264 chr1:155300265 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_77236 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155300229-155300354
64251 chr1 154408561 154408561 1 + G A STAD 154408558 + 154408538 154408578 41 GGCGAGTGGAGCGAGTGGAGCCCGGAGGCCATGGGCACGCC GGCGAGTGGAGCGAGTGGAGCCCAGAGGCCATGGGCACGCC < 41bp 0.726670012351083 0.470275481584211 0.8723469 0.62442726 prediction 0.453340024702166 Functional Loss - IL6R ENSG00000160712 CDS Human protein_coding chr1:154408558 chr1:154408561 synonymous SNV . 0 24 hm5C_associated_SNPs_77241 0 0 1 SRSF1 POSTAR2 ENCODE chr1:154408518-154408594
64251 chrX 115572265 115572265 1 + G A SKCM 115572262 + 115572242 115572282 41 GGAGGATTCTTCCATTGTTTCAAGGTTGGTATTAAAGCGTT GGAGGATTCTTCCATTGTTTCAAAGTTGGTATTAAAGCGTT < 41bp 0.726667371211926 0.494754069063595 0.88798463 0.81026125 prediction 0.453334742423852 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115572262 chrX:115572265 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_77246 0 0 1 PRPF8 POSTAR2 ENCODE chrX:115572254-115572301
64251 chr19 17838807 17838807 1 + C T DLBC 17838805 + 17838785 17838825 41 GCCCCTGGCCCGCCCCAACTCACGCGCTGCCGCCCCCAAAG GCCCCTGGCCCGCCCCAACTCATGCGCTGCCGCCCCCAAAG < 41bp 0.748670951079924 0.522004918866157 0.86443186 0.7838138 prediction 0.453332064427534 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17838805 chr19:17838807 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_77248 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17838731-17838812
64251 chr19 11022887 11022887 1 + G T SKCM 11022885 + 11022865 11022905 41 TCTTGATGTTGGCTGTGGCTCTGGGATCCTGTCGTTTTTTG TCTTGATGTTGGCTGTGGCTCTTGGATCCTGTCGTTTTTTG < 41bp 0.900055721799784 0.67339419548827 0.43735686 0.07504046 prediction 0.453323052623028 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11022885 chr19:11022887 nonsynonymous SNV 0.984 5 23 hm5C_associated_SNPs_77250 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:11022859-11022887
64251 chr5 140768224 140768224 1 + G T HNSC 140768221 + 140768201 140768241 41 CCTTTCAGAAAACGTGTACCCGGGGACCACGGTGCTACAGG CCTTTCAGAAAACGTGTACCCGGTGACCACGGTGCTACAGG < 41bp 0.726655663063897 0.363837039120333 0.9200276 0.70542514 prediction 0.453311326127794 Functional Loss - PCDHGB4 ENSG00000253953 CDS Human protein_coding chr5:140768221 chr5:140768224 nonsynonymous SNV 0.004 3 24 hm5C_associated_SNPs_77253 0 0 1 SND1 POSTAR2 ENCODE chr5:140768218-140768260
64251 chr10 6255657 6255657 1 + T C OV 6255656 + 6255636 6255676 41 CTCCCCGCCCGGGGCAAGACCTACATCTCCAAGAAGCTGAC CTCCCCGCCCGGGGCAAGACCCACATCTCCAAGAAGCTGAC < 41bp 0.726651601235329 0.457027855692401 0.5725708 0.08255464 prediction 0.453303202470658 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6255656 chr10:6255657 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_77256 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:6255656-6255657
64251 chr20 18516317 18516317 1 + G A UCEC 18516314 + 18516294 18516334 41 CAGGAGCTTGGTGTTGGTGGCACGAGTCAGTGGAAAATCTG CAGGAGCTTGGTGTTGGTGGCACAAGTCAGTGGAAAATCTG < 41bp 0.759925568896819 0.533276666629265 0.2982964 0.23348865 prediction 0.453297804535109 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18516314 chr20:18516317 synonymous SNV . 0 24 hm5C_associated_SNPs_77259 1 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr20:18516313-18516334
64251 chr1 181018351 181018351 1 + G A GBM 181018348 + 181018328 181018368 41 CCATGGATGGCAGAGAACCTCGCGCCTGATCACTGGGAGAG CCATGGATGGCAGAGAACCTCGCACCTGATCACTGGGAGAG < 41bp 0.7951383286433 0.568492264931212 0.5359862 0.35101902 prediction 0.453292127424176 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018348 chr1:181018351 synonymous SNV . 0 24 hm5C_associated_SNPs_77261 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr1 173446551 173446551 1 + G T SARC 173446549 + 173446529 173446569 41 CCGTCGCCATGCCCGGAGGTCTGCTTCTCGGGGACGTGGCT CCGTCGCCATGCCCGGAGGTCTTCTTCTCGGGGACGTGGCT < 41bp 0.726634852596718 0.376263391561095 0.30982336 0.15288603 prediction 0.453269705193437 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173446549 chr1:173446551 synonymous SNV . 0 23 hm5C_associated_SNPs_77265 0 0 26 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:173446460-173446560
64251 chr2 27279587 27279587 1 + G A BLCA 27279584 + 27279564 27279604 41 CAGAGAAGAATATGTATGCCCGAGACCGTAGAGATGGCCAG CAGAGAAGAATATGTATGCCCGAAACCGTAGAGATGGCCAG < 41bp 0.758143167534535 0.531509158397707 0.14532664 0.12031153 prediction 0.453268018273657 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27279584 chr2:27279587 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77267 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27279543-27279600
64251 chr19 53950534 53950534 1 + C T SKCM 53950532 + 53950512 53950552 41 GGAGTCAGGGATGGCTTTTTCTCAGGTGAGATGATATTTTC GGAGTCAGGGATGGCTTTTTCTTAGGTGAGATGATATTTTC < 41bp 0.812228051339267 0.585599624065238 0.23177081 0.24697793 prediction 0.453256854548058 Functional Loss - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53950532 chr19:53950534 . 0.013 0 23 hm5C_associated_SNPs_77269 0 0 2 PRPF8 POSTAR2 ENCODE chr19:53950481-53950570
64251 chr5 174919150 174919150 1 + G T LUSC 174919147 + 174919127 174919167 41 AAACATTAACATCAAGGAACCTCGATGGGATCAAAGCACTT AAACATTAACATCAAGGAACCTCTATGGGATCAAAGCACTT < 41bp 0.726618983480464 0.390747633240799 0.33502012 0.91840106 prediction 0.453237966960929 Functional Loss - SFXN1 ENSG00000164466 CDS Human protein_coding chr5:174919147 chr5:174919150 nonsynonymous SNV 0.750 1 24 hm5C_associated_SNPs_77273 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:174919107-174919249
64251 chr12 64824009 64824009 1 + G A COAD 64824006 + 64823986 64824026 41 TAGAAAAGTTGATGCTGGCACAAGATGAAGAAAGGCAAGCC TAGAAAAGTTGATGCTGGCACAAAATGAAGAAAGGCAAGCC < 41bp 0.731764839762171 0.505149058893441 0.52160317 0.4668388 prediction 0.453231561737461 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64824006 chr12:64824009 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_77276 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:64823963-64824014
64251 chr7 36324354 36324354 1 + G T THCA 36324351 + 36324331 36324371 41 GCCGGCATGGAGCTGAGAGACGCGGGTTCACAGGAGAGCTC GCCGGCATGGAGCTGAGAGACGCTGGTTCACAGGAGAGCTC < 41bp 0.930029434191467 0.703422866174113 0.82473356 0.22309646 prediction 0.453213136034707 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36324351 chr7:36324354 synonymous SNV . 0 24 hm5C_associated_SNPs_77279 0 0 3 GRWD1 POSTAR2 ENCODE chr7:36324306-36324390
64251 chr8 6616240 6616240 1 + C T rs143980487 6616238 + 6616218 6616258 41 CTGTGTTCCAGGAACCAGATCACGATTTTTAGCCATGGAAC CTGTGTTCCAGGAACCAGATCATGATTTTTAGCCATGGAAC < 41bp 0.726605789339382 0.487763289370517 0.20462084 0.12541112 prediction 0.453211578678765 Functional Loss - AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6616238 chr8:6616240 . . 0 23 hm5C_associated_SNPs_77282 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr8:6616128-6616271
64251 chr10 5496393 5496393 1 + C T BLCA 5496391 + 5496371 5496411 41 TTGGAGTTTCCTAGATATCCCTCGAAGTCGCCTAGTCAAAT TTGGAGTTTCCTAGATATCCCTTGAAGTCGCCTAGTCAAAT < 41bp 0.726605588483478 0.420102328610441 0.27485305 0.05198002 prediction 0.453211176966955 Functional Loss - NET1 ENSG00000173848 CDS Human protein_coding chr10:5496391 chr10:5496393 stopgain 1.000 0 23 hm5C_associated_SNPs_77283 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr10:5496358-5496394
64251 chr3 158369945 158369945 1 + G T GBM 158369943 + 158369923 158369963 41 GGGCGGCGGCCACTGACCACCGGCAGGAGCTAATTGAATGT GGGCGGCGGCCACTGACCACCGTCAGGAGCTAATTGAATGT < 41bp 0.890760041460913 0.66415668312142 0.38925987 0.20712748 prediction 0.453206716678987 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158369943 chr3:158369945 synonymous SNV . 0 23 hm5C_associated_SNPs_77284 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:158369919-158369948
64251 chr2 37468922 37468922 1 + G A STAD 37468919 + 37468899 37468939 41 TTTCCTGGTACCGAGATCTGCACGATGTTCCAAAAGGTAAT TTTCCTGGTACCGAGATCTGCACAATGTTCCAAAAGGTAAT < 41bp 0.726599528261997 0.497480530632791 0.053102672 0.027246684 prediction 0.453199056523994 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37468919 chr2:37468922 nonsynonymous SNV 0.770 4 24 hm5C_associated_SNPs_77287 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:37468920-37468940
64251 chr2 157439382 157439382 1 + C T SKCM 157439380 + 157439360 157439400 41 TGAAAACTGCAGAAGAGAACCTCGACAGAAGAGTTCCAATT TGAAAACTGCAGAAGAGAACCTTGACAGAAGAGTTCCAATT < 41bp 0.726598414866832 0.436964368690684 0.51575357 0.17628324 prediction 0.453196829733664 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157439380 chr2:157439382 synonymous SNV . 0 23 hm5C_associated_SNPs_77288 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:157439377-157439412
64251 chr10 89264834 89264834 1 + G A SKCM 89264831 + 89264811 89264851 41 TTCGGCACCAAGACTCGCTACGAGGATGTCAACCCCGTGCT TTCGGCACCAAGACTCGCTACGAAGATGTCAACCCCGTGCT < 41bp 0.791093525018977 0.564503186403031 0.81688035 0.28196585 prediction 0.453180677231892 Functional Loss - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89264831 chr10:89264834 synonymous SNV . 0 24 hm5C_associated_SNPs_77293 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:89264800-89264840
64251 chr7 99688740 99688740 1 + G A SKCM 99688737 + 99688717 99688757 41 CATTGGTGTAGACCACGTAGCCCGAATGACAGCAACAGGCA CATTGGTGTAGACCACGTAGCCCAAATGACAGCAACAGGCA < 41bp 0.777557866449465 0.550975446424313 0.30434328 0.12101242 prediction 0.453164840050304 Functional Loss - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688737 chr7:99688740 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_77296 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99688664-99688754
64251 chr11 118406159 118406159 1 + G A rs184827825 118406156 + 118406136 118406176 41 AGCCCTCTTTGTGGCTTCCCCACGTTTGGCCTTCTGGGATT AGCCCTCTTTGTGGCTTCCCCACATTTGGCCTTCTGGGATT < 41bp 0.734513411119381 0.507936687559819 0.1498647 0.0307087 prediction 0.453153447119123 Functional Loss - TMEM25 ENSG00000149582 UTR3 Human protein_coding chr11:118406156 chr11:118406159 . . 0 24 hm5C_associated_SNPs_77299 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:118406135-118406174
64251 chr20 3002788 3002788 1 + C T GBM 3002786 + 3002766 3002806 41 GACTTTGGGGTGCCTTTTACCCCGATCGGCATGCTCAAGTT GACTTTGGGGTGCCTTTTACCCTGATCGGCATGCTCAAGTT < 41bp 0.859555216881278 0.632981252964458 0.13512695 0.1136294 prediction 0.453147927833641 Functional Loss - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3002786 chr20:3002788 nonsynonymous SNV 0.982 3 23 hm5C_associated_SNPs_77302 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3002766-3002798
64251 chr1 9613837 9613837 1 + G A BLCA 9613834 + 9613814 9613854 41 GGAATGGTGAGACCAACATCCGTGACACCTGGACTCTTTCA GGAATGGTGAGACCAACATCCGTAACACCTGGACTCTTTCA < 41bp 0.75243527164584 0.525861395278433 0.3654927 0.19445214 prediction 0.453147752734814 Functional Loss - SLC25A33 ENSG00000171612 CDS Human protein_coding chr1:9613834 chr1:9613837 synonymous SNV . 0 24 hm5C_associated_SNPs_77303 0 0 1 PRPF8 POSTAR2 ENCODE chr1:9613821-9613924
64251 chr21 40752355 40752355 1 + C T rs536050361 40752353 + 40752333 40752373 41 ACTGGGCGTGGTTGCTGGTGCTCAGCTTCGTGTTTGGATGC ACTGGGCGTGGTTGCTGGTGCTTAGCTTCGTGTTTGGATGC < 41bp 0.747850204850587 0.521276500979651 0.075237095 0.08571094 prediction 0.453147407741871 Functional Loss - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40752353 chr21:40752355 synonymous SNV . 0 23 hm5C_associated_SNPs_77304 0 0 3 DDX3X POSTAR2 ENCODE chr21:40752259-40752413
64251 chr16 57790310 57790310 1 + G T THYM 57790308 + 57790288 57790328 41 CCTCCCTGAAGCTGATCCTGCAGCGGTTTCTGCCCCTCATC CCTCCCTGAAGCTGATCCTGCATCGGTTTCTGCCCCTCATC < 41bp 0.726571227617542 0.363135558918546 0.77905214 0.23381624 prediction 0.453142455235083 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57790308 chr16:57790310 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_77305 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57790295-57790325
64251 chr20 4163473 4163473 1 + G A COAD 4163470 + 4163450 4163490 41 GAGGCAGTGGCCGAGATCTGCACGGAGATGCTGCGTCAGTT GAGGCAGTGGCCGAGATCTGCACAGAGATGCTGCGTCAGTT < 41bp 0.768138386925885 0.541571088524399 0.58057725 0.25572717 prediction 0.453134596802973 Functional Loss - SMOX ENSG00000088826 CDS Human protein_coding chr20:4163470 chr20:4163473 synonymous SNV . 0 24 hm5C_associated_SNPs_77308 0 0 2 PPIG POSTAR2 ENCODE chr20:4163429-4163486
64251 chr1 65845091 65845091 1 + G T LGG 65845089 + 65845069 65845109 41 TGCTGTGCTCCCTTAGGTCTCAGAATGCAGTTGGCCCATTA TGCTGTGCTCCCTTAGGTCTCATAATGCAGTTGGCCCATTA < 41bp 0.726563432400989 0.376433410177189 0.7880046 0.21109763 prediction 0.453126864801977 Functional Loss - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65845089 chr1:65845091 stopgain 0.999 1 23 hm5C_associated_SNPs_77313 0 0 1 GPKOW POSTAR2 ENCODE chr1:65845071-65845101
64251 chr19 41038580 41038580 1 + C T UCEC 41038578 + 41038558 41038598 41 GCTGATGGCGCGGGATGGCACGCGGGAGGACAACCACAAGC GCTGATGGCGCGGGATGGCACGTGGGAGGACAACCACAAGC < 41bp 0.797487283421766 0.570927233349298 0.76225746 0.84936196 prediction 0.453120100144937 Functional Loss - SPTBN4 ENSG00000160460 CDS Human protein_coding chr19:41038578 chr19:41038580 nonsynonymous SNV 0.804 3 23 hm5C_associated_SNPs_77315 0 0 2 UCHL5 POSTAR2 ENCODE chr19:41038531-41038664
64251 chr19 2918343 2918343 1 + C T rs113742858 2918341 + 2918321 2918361 41 ACATTAATTCATGTATAATGCTCCAGAAAATTCACACCAGG ACATTAATTCATGTATAATGCTTCAGAAAATTCACACCAGG < 41bp 0.761602741025358 0.535055808567343 0.35009125 0.04741189 prediction 0.453093864916031 Functional Loss - ZNF57 ENSG00000253392 ncRNA_intronic Human antisense chr19:2918341 chr19:2918343 . . 0 23 hm5C_associated_SNPs_77320 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:2918313-2918344
64251 chr2 219616465 219616465 1 + C T COAD 219616462 + 219616442 219616482 41 TGGGGACAAATGTCGAATGGCTCCAGAGCATGTCACTGCAC TGGGGACAAATGTCGAATGGCTCTAGAGCATGTCACTGCAC < 41bp 0.744399131942455 0.517862494440551 0.8871793 0.69450223 prediction 0.453073275003809 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219616462 chr2:219616465 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_77328 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:219616458-219616470
64251 chr6 43100234 43100234 1 + C T UCEC 43100232 + 43100212 43100252 41 GAGCGTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGCC GAGCGTGTGACCTGCCTTCCCCTCAAGGGTCTGCCAGAGCC < 41bp 0.726535773946723 0.437018521778018 0.045845836 0.052586615 prediction 0.453071547893447 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43100232 chr6:43100234 nonsynonymous SNV 0.799 3 23 hm5C_associated_SNPs_77330 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr6:43100207-43100235
64251 chr4 184930569 184930569 1 + G A STAD 184930566 + 184930546 184930586 41 TGTCAGGGAAAGGACATTGCCCCGAAACCACTGCGACTCTT TGTCAGGGAAAGGACATTGCCCCAAAACCACTGCGACTCTT < 41bp 0.729450140793681 0.502924773760058 0.2845378 0.27570727 prediction 0.453050734067246 Functional Loss - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184930566 chr4:184930569 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_77332 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:184930562-184930583
64251 chr1 46073451 46073451 1 + G A rs201219258 46073448 + 46073428 46073468 41 CTGTGGTGACTCTAGAAAAGCAGGGCACTGCAGTGGAGGTA CTGTGGTGACTCTAGAAAAGCAGAGCACTGCAGTGGAGGTA < 41bp 0.787628725016561 0.561104094069699 0.8961264 0.85952294 prediction 0.453049261893725 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073448 chr1:46073451 nonsynonymous SNV 0.210 2 24 hm5C_associated_SNPs_77333 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46073410-46073491
64251 chrX 147018105 147018105 1 + A C UCEC 147018101 + 147018081 147018121 41 TGTGAGGGTGAGGATTGAGGCTGAAAATGAGAAAAATGTTC TGTGAGGGTGAGGATTGAGGCTGACAATGAGAAAAATGTTC < 41bp 0.726523970093689 0.322374500642618 0.04536915 0.049557388 prediction 0.453047940187379 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147018101 chrX:147018105 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_77335 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147018023-147018124
64251 chr16 88779160 88779160 1 + G A UCEC 88779157 + 88779137 88779177 41 GCTGGGGGCCGGGGGTGGTCCTGGCCCGACTCAAGGGGAGG GCTGGGGGCCGGGGGTGGTCCTGACCCGACTCAAGGGGAGG < 41bp 0.792056330438508 0.565535277266076 0.8467221 0.7712293 prediction 0.453042106344864 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779157 chr16:88779160 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_77338 0 0 1 FMR1 POSTAR2 ENCODE chr16:88779102-88779219
64251 chr22 41895779 41895779 1 + G C HNSC 41895775 + 41895755 41895795 41 ATGTGGCCTCAGTCCTGTGCCAACGGGCCAAGGTGGCGATG ATGTGGCCTCAGTCCTGTGCCAACCGGCCAAGGTGGCGATG < 41bp 0.726518933189159 0.43161922834428 0.07342985 0.07446781 prediction 0.453037866378319 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41895775 chr22:41895779 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_77340 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:41895760-41895780
64251 chr8 104337214 104337214 1 + A C UCEC 104337210 + 104337190 104337230 41 TTCATGCTTTTGTATTTTTTCACAATGGCTGGCACTGTGTG TTCATGCTTTTGTATTTTTTCACACTGGCTGGCACTGTGTG < 41bp 0.726515480590557 0.306766451412105 0.10623014 0.06477091 prediction 0.453030961181114 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104337210 chr8:104337214 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_77343 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr8:104337195-104337216
64251 chr12 69083327 69083327 1 + G T UCEC 69083324 + 69083304 69083344 41 GTTGTACAGTTCAGGCATCTCAAGATGAAAATTTTGGTAAT GTTGTACAGTTCAGGCATCTCAATATGAAAATTTTGGTAAT < 41bp 0.800721156516174 0.574209522769906 0.8045403 0.24536854 prediction 0.453023267492535 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69083324 chr12:69083327 nonsynonymous SNV 0.941 1 24 hm5C_associated_SNPs_77345 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:69083320-69083340
64251 chr1 146650721 146650721 1 + G T HNSC 146650718 + 146650698 146650738 41 TTTGTCATGCAGGAGGATTTCTCGCGTGATGGGAATGCTCT TTTGTCATGCAGGAGGATTTCTCTCGTGATGGGAATGCTCT < 41bp 0.726510093809568 0.349796406512917 0.04577273 0.051554292 prediction 0.453020187619136 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650718 chr1:146650721 . . 0 24 hm5C_associated_SNPs_77346 0 0 2 LIN28A POSTAR2 GSE39873,GSM980593 chr1:146650704-146650725
64251 chr1 146650720 146650720 1 + C T LUAD 146650718 + 146650698 146650738 41 TTTGTCATGCAGGAGGATTTCTCGCGTGATGGGAATGCTCT TTTGTCATGCAGGAGGATTTCTTGCGTGATGGGAATGCTCT < 41bp 0.726510093809568 0.457104852899454 0.04577273 0.053866178 prediction 0.453020187619136 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650718 chr1:146650720 . . 0 23 hm5C_associated_SNPs_77347 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:146650700-146650720
64251 chr16 67232523 67232523 1 + G A rs77960079 67232520 + 67232500 67232540 41 CTCTCACGTGCCCACTTCTGCTGGGCCTTTAGCCCTAGAAC CTCTCACGTGCCCACTTCTGCTGAGCCTTTAGCCCTAGAAC < 41bp 0.768330296905677 0.541836233118129 0.26596582 0.11885077 prediction 0.452988127575095 Functional Loss - E2F4 ENSG00000205250 UTR3 Human protein_coding chr16:67232520 chr16:67232523 . . 0 24 hm5C_associated_SNPs_77353 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67232461-67232531
64251 chr12 123463813 123463813 1 + G A UCEC 123463810 + 123463790 123463830 41 GTCCCATGTGCTGCCGTGAGCCCGACCTGGTGGACGATGAG GTCCCATGTGCTGCCGTGAGCCCAACCTGGTGGACGATGAG < 41bp 0.740400172135059 0.513906765672693 0.094215006 0.07359004 prediction 0.452986812924733 Functional Loss - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463810 chr12:123463813 nonsynonymous SNV 0.067 1 24 hm5C_associated_SNPs_77354 0 0 3 NONO POSTAR2 ENCODE chr12:123463763-123463829
64251 chr5 82808062 82808062 1 + G C LUSC 82808061 + 82808041 82808081 41 GGCTTTGACCAGTGCGATTACGGGTGGCTGTCGGATGCCAG GGCTTTGACCAGTGCGATTACCGGTGGCTGTCGGATGCCAG < 41bp 0.726488060119351 0.431816032009414 0.6994134 0.3268093 prediction 0.452976120238702 Functional Loss - VCAN ENSG00000038427 CDS Human protein_coding chr5:82808061 chr5:82808062 nonsynonymous SNV 0.980 4 22 hm5C_associated_SNPs_77356 0 0 3 GRWD1 POSTAR2 ENCODE chr5:82807935-82808171
64251 chr3 49044877 49044877 1 + G A BLCA 49044874 + 49044854 49044894 41 CGAGGATCGACATGGACGCTCTCGAGGACTACGTTTGGCCG CGAGGATCGACATGGACGCTCTCAAGGACTACGTTTGGCCG < 41bp 0.754419939098106 0.527934096255418 0.57091725 0.27118188 prediction 0.452971685685375 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49044874 chr3:49044877 nonsynonymous SNV 0.839 0 24 hm5C_associated_SNPs_77357 0 0 26 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:49044820-49044880
64251 chr2 20647760 20647760 1 + G A DLBC 20647757 + 20647737 20647777 41 TTCGAGACGGCCACGCGCGCCGCGCTGCAGAAGCGCTACGG TTCGAGACGGCCACGCGCGCCGCACTGCAGAAGCGCTACGG < 41bp 0.767003416692425 0.540518074348888 0.20039678 0.07622087 prediction 0.452970684687074 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647757 chr2:20647760 synonymous SNV . 0 24 hm5C_associated_SNPs_77358 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:20647760-20647780
64251 chr17 37871598 37871598 1 + T C SKCM 37871597 + 37871577 37871617 41 AGCTCCAAGTGTTTGAGACTCTGGAAGAGATCACAGGTGGG AGCTCCAAGTGTTTGAGACTCCGGAAGAGATCACAGGTGGG < 41bp 0.784727699908267 0.558242766404853 0.4322979 0.4881733 prediction 0.452969867006828 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37871597 chr17:37871598 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_77359 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:37871588-37871611
64251 chr14 76668066 76668066 1 + G T OV 76668064 + 76668044 76668084 41 TGCAGTGGAGCCAACCACACCAGCATCACAAGCCCCCAAAT TGCAGTGGAGCCAACCACACCATCATCACAAGCCCCCAAAT < 41bp 0.726481266786256 0.387495682524138 0.0670535 0.004723698 prediction 0.452962533572511 Functional Loss - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76668064 chr14:76668066 nonsynonymous SNV 0.284 0 23 hm5C_associated_SNPs_77363 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:76668038-76668067
64251 chr7 131128432 131128432 1 + C T UCEC 131128430 + 131128410 131128450 41 TGGGCCTGAGGACATCCAGTCTCGAATAGGACACTGCATGT TGGGCCTGAGGACATCCAGTCTTGAATAGGACACTGCATGT < 41bp 0.726476410379701 0.428971502386154 0.7189522 0.056639493 prediction 0.452952820759402 Functional Loss - MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131128430 chr7:131128432 stopgain 1.000 1 23 hm5C_associated_SNPs_77368 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr7:131128364-131128447
64251 chr8 28574774 28574774 1 + T C LIHC 28574773 + 28574753 28574793 41 CAGGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACC CAGGTCCTGGTGGAATTCACCCGCAAAAACCAGCCCAAACC < 41bp 0.72647445494366 0.471360745872781 0.263915 0.17516369 prediction 0.45294890988732 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574773 chr8:28574774 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_77369 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:28574753-28574778
64251 chr19 10748940 10748940 1 + G T LUSC 10748937 + 10748917 10748957 41 TTCTTCTTCACCCACCGTATCAGGATCGTGCAGGATACAGC TTCTTCTTCACCCACCGTATCAGTATCGTGCAGGATACAGC < 41bp 0.726471908255702 0.319496500286162 0.584976 0.020171553 prediction 0.452943816511404 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10748937 chr19:10748940 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_77372 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:10748940-10748960
64251 chr9 137007160 137007160 1 + G A UCEC 137007157 + 137007137 137007177 41 TTGAAGATATGGGACGTGAGCTCGGTAAGTGACACTCAGTG TTGAAGATATGGGACGTGAGCTCAGTAAGTGACACTCAGTG < 41bp 0.762266932081966 0.53580353460258 0.12498909 0.11045802 prediction 0.452926794958771 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137007157 chr9:137007160 synonymous SNV . 0 24 hm5C_associated_SNPs_77376 0 0 2 PPIG POSTAR2 ENCODE chr9:137007119-137007160
64251 chr19 47258794 47258794 1 + C T LUSC 47258792 + 47258772 47258812 41 TCTATGTCTCGTGGCTGCAGCACCAGCCTAGGAATTCCCGG TCTATGTCTCGTGGCTGCAGCATCAGCCTAGGAATTCCCGG < 41bp 0.810111768315739 0.583652231659487 0.3370034 0.29502144 prediction 0.452919073312504 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258792 chr19:47258794 synonymous SNV . 0 23 hm5C_associated_SNPs_77381 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:47258774-47258798
64251 chr19 42799091 42799091 1 + G A UCEC 42799088 + 42799068 42799108 41 ATCATGCAGGCTGCCACTCCCACGGAGCAGCCCCCTGGAGC ATCATGCAGGCTGCCACTCCCACAGAGCAGCCCCCTGGAGC < 41bp 0.773841323483679 0.547384357333526 0.80028284 0.25387126 prediction 0.452913932300306 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42799088 chr19:42799091 synonymous SNV . 0 24 hm5C_associated_SNPs_77383 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42799088-42799125
64251 chr19 15784434 15784434 1 + C T KIRC 15784432 + 15784412 15784452 41 GTTGTGGGCTCCTGGCTACTCGCCCGCATCCTGGCTTGGAC GTTGTGGGCTCCTGGCTACTCGTCCGCATCCTGGCTTGGAC < 41bp 0.812541123326059 0.586089038992141 0.022963166 0.020487368 prediction 0.452904168667837 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784432 chr19:15784434 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_77386 0 0 1 DDX3X POSTAR2 ENCODE chr19:15784344-15784448
64251 chr10 85909981 85909981 1 + G A rs377523783 85909978 + 85909958 85909998 41 CCCTGGGAGTGGGCCTGGGTCTCGTCTTTGTGTCCTCATTG CCCTGGGAGTGGGCCTGGGTCTCATCTTTGTGTCCTCATTG < 41bp 0.790859663137942 0.564411272718734 0.22259453 0.12379566 prediction 0.452896780838415 Functional Loss - GHITM ENSG00000165678 CDS Human protein_coding chr10:85909978 chr10:85909981 nonsynonymous SNV 0.964 2 24 hm5C_associated_SNPs_77390 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:85909933-85909983
64251 chrX 100646010 100646010 1 + C T KIRP 100646008 + 100645988 100646028 41 CCTCGCGGTTTCTTTCTTTCCGCGCCGATAGCGCTCACGCA CCTCGCGGTTTCTTTCTTTCCGTGCCGATAGCGCTCACGCA < 41bp 0.772201762978668 0.545755630895904 0.07288906 0.055777162 prediction 0.452892264165528 Functional Loss - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646008 chrX:100646010 synonymous SNV . 0 23 hm5C_associated_SNPs_77393 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:100645987-100646011
64251 chr8 99961765 99961765 1 + G A SKCM 99961762 + 99961742 99961782 41 CTCATCCATGAGAGGACCCACACGGACGAGAGGCCGTACAC CTCATCCATGAGAGGACCCACACAGACGAGAGGCCGTACAC < 41bp 0.770891847247783 0.544451966350865 0.114587486 0.0205338 prediction 0.452879761793834 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961762 chr8:99961765 synonymous SNV . 0 24 hm5C_associated_SNPs_77395 0 0 1 RBM15 POSTAR2 ENCODE chr8:99961727-99961784
64251 chr4 4411393 4411393 1 + G A KIRC 4411390 + 4411370 4411410 41 ACAAGTATGACCGCGCCTGCCCCGATGGGTTCGTCCTCAAG ACAAGTATGACCGCGCCTGCCCCAATGGGTTCGTCCTCAAG < 41bp 0.726435741400828 0.480999827618728 0.11599401 0.1460155 prediction 0.452871482801656 Functional Loss - NSG1 ENSG00000168824 CDS Human protein_coding chr4:4411390 chr4:4411393 nonsynonymous SNV 0.704 1 24 hm5C_associated_SNPs_77397 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:4411368-4411402
64251 chr17 48745040 48745040 1 + G T LUAD 48745038 + 48745018 48745058 41 AGCAGGTGGAGGGCATCAGGCAGGGTGAGCTCCAGCTGCTG AGCAGGTGGAGGGCATCAGGCATGGTGAGCTCCAGCTGCTG < 41bp 0.916213857464303 0.689779510266496 0.9046812 0.8291861 prediction 0.452868694395614 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745038 chr17:48745040 nonsynonymous SNV 0.719 1 23 hm5C_associated_SNPs_77398 0 0 1 U2AF1 POSTAR2 ENCODE chr17:48745028-48745052
64251 chr1 6681484 6681484 1 + G A LGG 6681481 + 6681461 6681501 41 TTCCTTCCAGATGACGATTCCTGGGACCTCGTGACCTGCTT TTCCTTCCAGATGACGATTCCTGAGACCTCGTGACCTGCTT < 41bp 0.726433505156345 0.487921605917531 0.27636033 0.16171029 prediction 0.452867010312691 Functional Loss - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681481 chr1:6681484 stopgain 1.000 1 24 hm5C_associated_SNPs_77399 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:6681472-6681500
64251 chr19 11475547 11475547 1 + G A rs568564744 11475544 + 11475524 11475564 41 TCTCTGGCCCTCTGAGATATCCCGATGGGCACAAATGGAAG TCTCTGGCCCTCTGAGATATCCCAATGGGCACAAATGGAAG < 41bp 0.7547340941158 0.52830070468761 0.16762233 0.07729185 prediction 0.45286677885638 Functional Loss - PLPPR2 ENSG00000105520 UTR3 Human protein_coding chr19:11475544 chr19:11475547 . . 0 24 hm5C_associated_SNPs_77400 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11475517-11475547
64251 chr16 11770334 11770334 1 + G A rs112174821 11770331 + 11770311 11770351 41 GTCATCGCATGCACTGATGCCCGGGGACCTGGCTGTCCTGG GTCATCGCATGCACTGATGCCCGAGGACCTGGCTGTCCTGG < 41bp 0.726430024540836 0.482034342875666 0.93517417 0.8868551 prediction 0.452860049081671 Functional Loss - SNN ENSG00000184602 UTR3 Human protein_coding chr16:11770331 chr16:11770334 . . 0 24 hm5C_associated_SNPs_77404 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:11770320-11770340
64251 chr2 220072422 220072422 1 + G T CESC 220072419 + 220072399 220072439 41 TAATGTGCCTGTGCCTGTGGCCAGAGGGGAGCCCCCTGACC TAATGTGCCTGTGCCTGTGGCCATAGGGGAGCCCCCTGACC < 41bp 0.726417959125941 0.333725117044751 0.880807 0.79183763 prediction 0.452835918251882 Functional Loss - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072419 chr2:220072422 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77410 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:220072411-220072436
64251 chr1 219366581 219366581 1 + A C UCEC 219366580 + 219366560 219366600 41 AAAAGTGGCATCAAGAAGAACAGGATATTAATAGGTAAGAC AAAAGTGGCATCAAGAAGAACCGGATATTAATAGGTAAGAC < 41bp 0.765968965217414 0.539557570438418 0.479704 0.5862939 prediction 0.452822789557992 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219366580 chr1:219366581 synonymous SNV . 0 22 hm5C_associated_SNPs_77417 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:219366486-219366583
64251 chr20 46281219 46281219 1 + G A SKCM 46281216 + 46281196 46281236 41 TCCCAATGCAATGATGTCGTCAAGAATGGGTCCCTCCCAGA TCCCAATGCAATGATGTCGTCAAAAATGGGTCCCTCCCAGA < 41bp 0.757156847153511 0.530748762948395 0.23333928 0.14481705 prediction 0.452816168410232 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46281216 chr20:46281219 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_77421 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr20:46281200-46281220
64251 chrX 118603845 118603845 1 + C T UCEC 118603843 + 118603823 118603863 41 ACAAGAGAACCCAGTTTTGGCTCTACTTTGCAGGGAATCTG ACAAGAGAACCCAGTTTTGGCTTTACTTTGCAGGGAATCTG < 41bp 0.726394995184261 0.439534877844708 0.12016624 0.095427334 prediction 0.452789990368522 Functional Loss - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603843 chrX:118603845 synonymous SNV . 0 23 hm5C_associated_SNPs_77424 0 0 25 SRRM4 POSTAR2 GSE57278,GSM1378374 chrX:118603780-118603880
64251 chr16 90001296 90001296 1 + G A UCEC 90001293 + 90001273 90001313 41 GCTGGGGGGCGGCACGGGCTCCGGCATGGGCACGTTGCTCA GCTGGGGGGCGGCACGGGCTCCGACATGGGCACGTTGCTCA < 41bp 0.77470175089343 0.548311709449044 0.4256654 0.06434065 prediction 0.452780082888771 Functional Loss - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001293 chr16:90001296 nonsynonymous SNV 0.791 5 24 hm5C_associated_SNPs_77427 0 0 1 RPS3 POSTAR2 ENCODE chr16:90001169-90001316
64251 chr19 35504556 35504556 1 + G A rs146626930 35504553 + 35504533 35504573 41 GGTTCGCGCCGTGGCCATGTCACGCCCAACCTTTCCCGAGC GGTTCGCGCCGTGGCCATGTCACACCCAACCTTTCCCGAGC < 41bp 0.726389011905503 0.471891748626533 0.06277445 0.0136678815 prediction 0.452778023811005 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504553 chr19:35504556 synonymous SNV . 0 24 hm5C_associated_SNPs_77429 0 0 3 DDX24 POSTAR2 ENCODE chr19:35504426-35504557
64251 chr12 124069186 124069186 1 + G T COAD 124069183 + 124069163 124069203 41 GGCTTCGGCCTCAGCCCCACCATGGTGACGCTTGCTGAACT GGCTTCGGCCTCAGCCCCACCATTGTGACGCTTGCTGAACT < 41bp 0.779011690833672 0.552629485695587 0.8813133 0.21485874 prediction 0.45276441027617 Functional Loss - TMED2 ENSG00000086598 CDS Human protein_coding chr12:124069183 chr12:124069186 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_77431 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819215 chr12:124069100-124069300
64251 chr17 27065703 27065703 1 + A C rs141650477 27065702 + 27065682 27065722 41 TCCCCAGACAGAGGCATCATCATGACATTCGGCAGCGGCAG TCCCCAGACAGAGGCATCATCCTGACATTCGGCAGCGGCAG < 41bp 0.726376874923262 0.451638292289912 0.410635 0.3719351 prediction 0.452753749846525 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27065702 chr17:27065703 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_77436 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:27065700-27065720
64251 chr17 27065705 27065705 1 + G T OV 27065702 + 27065682 27065722 41 TCCCCAGACAGAGGCATCATCATGACATTCGGCAGCGGCAG TCCCCAGACAGAGGCATCATCATTACATTCGGCAGCGGCAG < 41bp 0.726376874923262 0.318276090790876 0.410635 0.2087762 prediction 0.452753749846525 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27065702 chr17:27065705 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_77437 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:27065700-27065720
64251 chr11 75479883 75479883 1 + G C rs539976120 75479879 + 75479859 75479899 41 TCTCTCGCGCCACCACTGGCCGCCGGCCGCAGCTCCAGGTG TCTCTCGCGCCACCACTGGCCGCCCGCCGCAGCTCCAGGTG < 41bp 0.837283923240733 0.610922314122083 0.5516606 0.065007806 prediction 0.4527232182373 Functional Loss - DGAT2 ENSG00000062282 UTR5 Human protein_coding chr11:75479879 chr11:75479883 . . 0 25 hm5C_associated_SNPs_77443 0 0 4 DDX3X POSTAR2 ENCODE chr11:75479856-75479935
64251 chr11 86519161 86519161 1 + G T LUSC 86519158 + 86519138 86519178 41 AACATCAGTGAAGTTATCCACGGGCTGCACCGGCACCCTGG AACATCAGTGAAGTTATCCACGGTCTGCACCGGCACCCTGG < 41bp 0.726360595773294 0.327908956014951 0.6540225 0.2715472 prediction 0.452721191546587 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86519158 chr11:86519161 nonsynonymous SNV 0.969 5 24 hm5C_associated_SNPs_77444 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:86519123-86519161
64251 chr17 38350184 38350184 1 + G A rs60094150 38350181 + 38350161 38350201 41 AGAGGTCGATGGATTTACCCCTGGACCCATAAGTCTGTTCA AGAGGTCGATGGATTTACCCCTGAACCCATAAGTCTGTTCA < 41bp 0.777271660277425 0.550911232254315 0.4105913 0.21358854 prediction 0.452720856046221 Functional Loss - RAPGEFL1 ENSG00000108352 UTR3 Human protein_coding chr17:38350181 chr17:38350184 . . 0 24 hm5C_associated_SNPs_77445 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039847-ERR039848 chr17:38350180-38350200
64251 chr7 150069948 150069948 1 + G T SKCM 150069945 + 150069925 150069965 41 CCCACCGCAAGAGCCACATCCGGGACGGCGCCTTCTGCTGT CCCACCGCAAGAGCCACATCCGGTACGGCGCCTTCTGCTGT < 41bp 0.927097685875596 0.700743144188802 0.91564476 0.1833936 prediction 0.452709083373588 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069945 chr7:150069948 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_77450 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150069900-150070020
64251 chr2 10350596 10350596 1 + G T LUAD 10350593 + 10350573 10350613 41 CTGTTTCAGAATGAAGTTATCTGGGTGGGAACTCACCAAGA CTGTTTCAGAATGAAGTTATCTGTGTGGGAACTCACCAAGA < 41bp 0.925566870886646 0.699213398688581 0.92769456 0.39168376 prediction 0.452706944396131 Functional Loss - C2orf48 ENSG00000163009 CDS Human lincRNA chr2:10350593 chr2:10350596 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_77452 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:10350583-10350606
64251 chr19 50173481 50173481 1 + G A STAD 50173478 + 50173458 50173498 41 TCTTCCACCCTACAGCTGGCCTCGGACCCCGCCCTGCGCAG TCTTCCACCCTACAGCTGGCCTCAGACCCCGCCCTGCGCAG < 41bp 0.744120637104535 0.517771731750632 0.31087294 0.1776092 prediction 0.452697810707807 Functional Loss - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50173478 chr19:50173481 synonymous SNV . 0 24 hm5C_associated_SNPs_77454 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:50173480-50173481
64251 chr2 101587504 101587504 1 + C T LGG 101587502 + 101587482 101587522 41 GGAGCTGGCTCTGGAAGACCCGCCATCCGAGGCCCTCCACT GGAGCTGGCTCTGGAAGACCCGTCATCCGAGGCCCTCCACT < 41bp 0.841504793134859 0.61516367139875 0.90260255 0.45231822 prediction 0.452682243472219 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101587502 chr2:101587504 nonsynonymous SNV 0.043 0 23 hm5C_associated_SNPs_77458 0 0 2 PPIG POSTAR2 ENCODE chr2:101587444-101587543
64251 chr1 89251812 89251812 1 + C T COAD 89251810 + 89251790 89251830 41 ATGTCTGTGCTGTTTTGAAGCTCGATAATACTGTGGTTGGC ATGTCTGTGCTGTTTTGAAGCTTGATAATACTGTGGTTGGC < 41bp 0.726335836532094 0.429590495258582 0.06447461 0.030573875 prediction 0.452671673064189 Functional Loss - PKN2 ENSG00000065243 CDS Human protein_coding chr1:89251810 chr1:89251812 synonymous SNV . 0 23 hm5C_associated_SNPs_77463 0 0 20 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:89251782-89251812
64251 chr20 34130292 34130292 1 + C T UCEC 34130290 + 34130270 34130310 41 TGAGCTCTACGTGGACAAGTCGCGGGGAGATAAACTGAAGA TGAGCTCTACGTGGACAAGTCGTGGGGAGATAAACTGAAGA < 41bp 0.836252656789077 0.609922249549054 0.88512516 0.8561225 prediction 0.452660814480046 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34130290 chr20:34130292 nonsynonymous SNV 0.974 4 23 hm5C_associated_SNPs_77466 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:34130266-34130299
64251 chr9 91930206 91930206 1 + G T LUSC 91930203 + 91930183 91930223 41 GCTGGGTTCATTACATGATTCATGAGCCAGGTAAGCTATGC GCTGGGTTCATTACATGATTCATTAGCCAGGTAAGCTATGC < 41bp 0.726317892143622 0.354174103683535 0.14803755 0.050843447 prediction 0.452635784287243 Functional Loss - CKS2 ENSG00000123975 CDS Human protein_coding chr9:91930203 chr9:91930206 stopgain 1.000 1 24 hm5C_associated_SNPs_77471 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:91930167-91930206
64251 chr19 17581502 17581502 1 + G C LUSC 17581501 + 17581481 17581521 41 GCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTGTGAG GCGCATCGTCTGCAAGACCGCCAGGCGAGACCTCTTGTGAG < 41bp 0.726317883682871 0.406382798980303 0.91300714 0.89319444 prediction 0.452635767365743 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17581501 chr19:17581502 synonymous SNV . 0 22 hm5C_associated_SNPs_77472 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17581479-17581506
64251 chr16 67662356 67662356 1 + G A BLCA 67662353 + 67662333 67662373 41 CACTGCGATAAGACCTTCCGCCAGAAGCAGCTTCTCGACAT CACTGCGATAAGACCTTCCGCCAAAAGCAGCTTCTCGACAT < 41bp 0.72631454746778 0.48630602626398 0.39836052 0.3663618 prediction 0.45262909493556 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67662353 chr16:67662356 synonymous SNV . 0 24 hm5C_associated_SNPs_77475 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662332-67662368
64251 chr19 18967817 18967817 1 + C T BLCA 18967815 + 18967795 18967835 41 AGTGCATGGTTCCCGTGGTCCTCGGGGCCAAGCAGGTGGGC AGTGCATGGTTCCCGTGGTCCTTGGGGCCAAGCAGGTGGGC < 41bp 0.726314237196881 0.451641127017328 0.25300312 0.14771694 prediction 0.452628474393762 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18967815 chr19:18967817 synonymous SNV . 0 23 hm5C_associated_SNPs_77476 0 0 13 DDX24 POSTAR2 ENCODE chr19:18967790-18967829
64251 chr19 18967816 18967816 1 + T C STAD 18967815 + 18967795 18967835 41 AGTGCATGGTTCCCGTGGTCCTCGGGGCCAAGCAGGTGGGC AGTGCATGGTTCCCGTGGTCCCCGGGGCCAAGCAGGTGGGC < 41bp 0.726314237196881 0.468087084160748 0.25300312 0.33960736 prediction 0.452628474393762 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18967815 chr19:18967816 nonsynonymous SNV 0.977 5 22 hm5C_associated_SNPs_77477 0 0 13 DDX24 POSTAR2 ENCODE chr19:18967790-18967829
64251 chr5 175717342 175717342 1 + G A rs147486006 175717339 + 175717319 175717359 41 ACCTCAAGAAGTGCCATGCCCTCGGCAGAATATCCCAGGCC ACCTCAAGAAGTGCCATGCCCTCAGCAGAATATCCCAGGCC < 41bp 0.726313511408557 0.471682661543772 0.10068244 0.11137766 prediction 0.452627022817113 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717339 chr5:175717342 nonsynonymous SNV 0.019 0 24 hm5C_associated_SNPs_77478 0 0 2 YBX3 POSTAR2 ENCODE chr5:175717319-175717367
64251 chr5 175717341 175717341 1 + C T BRCA 175717339 + 175717319 175717359 41 ACCTCAAGAAGTGCCATGCCCTCGGCAGAATATCCCAGGCC ACCTCAAGAAGTGCCATGCCCTTGGCAGAATATCCCAGGCC < 41bp 0.726313511408557 0.453068195100838 0.10068244 0.10506347 prediction 0.452627022817113 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717339 chr5:175717341 nonsynonymous SNV 0.104 2 23 hm5C_associated_SNPs_77479 0 0 3 IGF2BP2 POSTAR2 ENCODE chr5:175717225-175717341
64251 chr20 48604525 48604525 1 + C T COAD 48604523 + 48604503 48604543 41 GTACCAGTGCCAGGCGTGTGCTCGGACCTTCTCCCGAATGT GTACCAGTGCCAGGCGTGTGCTTGGACCTTCTCCCGAATGT < 41bp 0.818064745931282 0.59175136090537 0.34848344 0.24418998 prediction 0.452626770051823 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48604523 chr20:48604525 nonsynonymous SNV 0.540 4 23 hm5C_associated_SNPs_77482 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:48604520-48604538
64251 chr11 118242324 118242324 1 + A C rs145949976 118242323 + 118242303 118242343 41 TCTCTCTGCTGATCGAGATGCAGGAGAGAGGCACATTTTTT TCTCTCTGCTGATCGAGATGCCGGAGAGAGGCACATTTTTT < 41bp 0.726305596766798 0.466086296405414 0.5866529 0.36220694 prediction 0.452611193533596 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118242323 chr11:118242324 synonymous SNV . 0 22 hm5C_associated_SNPs_77487 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:118242319-118242344
64251 chr9 124074720 124074720 1 + G A UCEC 124074717 + 124074697 124074737 41 CAACGAGCGGAGTGGCCGGGCCCGAGTGCACGTGTCTGAGG CAACGAGCGGAGTGGCCGGGCCCAAGTGCACGTGTCTGAGG < 41bp 0.726304301009446 0.497895287928783 0.12061688 0.12010455 prediction 0.452608602018893 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124074717 chr9:124074720 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_77488 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr9:124074720-124074740
64251 chrX 55784683 55784683 1 + T C UCEC 55784682 + 55784662 55784702 41 TCCGCCCCCGCCCTCAGCTTCTGCAGCTACTCTGATCAACA TCCGCCCCCGCCCTCAGCTTCCGCAGCTACTCTGATCAACA < 41bp 0.726293619306912 0.466593754427476 0.16977003 0.121381134 prediction 0.452587238613824 Functional Loss - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55784682 chrX:55784683 synonymous SNV . 0 22 hm5C_associated_SNPs_77497 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:55784683-55784721
64251 chr2 102493513 102493513 1 + G T GBM 102493511 + 102493491 102493531 41 AGTGGCCTGATGCTGCTGGACAGAAGTGGCCAAGGGAAGGT AGTGGCCTGATGCTGCTGGACATAAGTGGCCAAGGGAAGGT < 41bp 0.726290738316007 0.406009144885426 0.36933476 0.20529467 prediction 0.452581476632014 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102493511 chr2:102493513 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_77499 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:102493513-102493532
64251 chr5 167891893 167891893 1 + G A COAD 167891890 + 167891870 167891910 41 AGCTGGAACAAGCCAAGAGCCACGGGGAGAAGGAGCTGCCA AGCTGGAACAAGCCAAGAGCCACAGGGAGAAGGAGCTGCCA < 41bp 0.756253987295758 0.529965087195563 0.43365502 0.39169157 prediction 0.452577800200389 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167891890 chr5:167891893 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_77500 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:167891880-167891900
64251 chr19 1271983 1271983 1 + G A HNSC 1271980 + 1271960 1272000 41 AACGTTTGTCTGTCTTGCAGCCGGAGTCAGAGTGGTGGCTA AACGTTTGTCTGTCTTGCAGCCGAAGTCAGAGTGGTGGCTA < 41bp 0.784412691319188 0.558133985643315 0.79495645 0.20235804 prediction 0.452557411351746 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271980 chr19:1271983 synonymous SNV . 0 24 hm5C_associated_SNPs_77505 0 0 8 DDX24 POSTAR2 ENCODE chr19:1271978-1271990
64251 chr7 16823328 16823328 1 + C T rs79521643 16823326 + 16823306 16823346 41 GAAACTTGTGGTCTCTGAAGCTCGGTGGCACCTGGAATTTA GAAACTTGTGGTCTCTGAAGCTTGGTGGCACCTGGAATTTA < 41bp 0.726277950444084 0.475915229905662 0.31224024 0.22523615 prediction 0.452555900888168 Functional Loss - TSPAN13 ENSG00000106537 UTR3 Human protein_coding chr7:16823326 chr7:16823328 . . 0 23 hm5C_associated_SNPs_77508 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:16823096-16823525
64251 chr5 56526749 56526749 1 + A T SKCM 56526745 + 56526725 56526765 41 GTTATGATGTGAACCGTCGACGACACAACTCTTCAGATGGC GTTATGATGTGAACCGTCGACGACTCAACTCTTCAGATGGC < 41bp 0.726273465901908 0.392873540334248 0.25826108 0.12710953 prediction 0.452546931803815 Functional Loss - GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56526745 chr5:56526749 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_77510 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:56526679-56526750
64251 chr4 140587125 140587125 1 + A T rs2132845 140587121 + 140587101 140587141 41 GGAAGGTCAGCATTCAAAGTCAAGAAGCGCCATTTATCTTC GGAAGGTCAGCATTCAAAGTCAAGTAGCGCCATTTATCTTC < 41bp 0.727561726807909 0.501288872615642 0.28371435 0.22389889 prediction 0.452545708384534 Functional Loss - MGST2 ENSG00000085871 UTR5 Human protein_coding chr4:140587121 chr4:140587125 . . 0 25 hm5C_associated_SNPs_77512 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:140587097-140587125
64251 chr3 10283890 10283890 1 + G T LUAD 10283888 + 10283868 10283908 41 TACAAAGAGGAAAAAGTGGACAGCATTGAGCTCTTTGGCCC TACAAAGAGGAAAAAGTGGACATCATTGAGCTCTTTGGCCC < 41bp 0.726271911910406 0.401973307408106 0.6504374 0.6307539 prediction 0.452543823820811 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10283888 chr3:10283890 nonsynonymous SNV 0.873 3 23 hm5C_associated_SNPs_77514 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr3:10283890-10283911
64251 chr8 19709344 19709344 1 + C T rs186558993 19709342 + 19709322 19709362 41 GACCTTTCCACCAGACACAGCTCGGGCCTGTGTAATTGTAG GACCTTTCCACCAGACACAGCTTGGGCCTGTGTAATTGTAG < 41bp 0.726268713076422 0.484469807704917 0.03395191 0.01659742 prediction 0.452537426152844 Functional Loss - INTS10 ENSG00000104613 UTR3 Human protein_coding chr8:19709342 chr8:19709344 . . 0 23 hm5C_associated_SNPs_77516 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:19709338-19709378
64251 chr8 23147951 23147951 1 + C T UCEC 23147949 + 23147929 23147969 41 GAGGATGGCCCCAGCAGCTGCTCGGAGGACGATTACAGTGA GAGGATGGCCCCAGCAGCTGCTTGGAGGACGATTACAGTGA < 41bp 0.815894429352753 0.589646258034594 0.81691223 0.28180537 prediction 0.452496342636317 Functional Loss - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147949 chr8:23147951 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_77526 0 0 3 DDX24 POSTAR2 ENCODE chr8:23147941-23147994
64251 chr1 223936755 223936755 1 + G A UCEC 223936752 + 223936732 223936772 41 TGTTTGCAGATCACCAGCGCCGCGGACTCGGAGGCCATCAC TGTTTGCAGATCACCAGCGCCGCAGACTCGGAGGCCATCAC < 41bp 0.764375876759497 0.538127942250565 0.88978827 0.34736782 prediction 0.452495869017862 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223936752 chr1:223936755 synonymous SNV . 0 24 hm5C_associated_SNPs_77527 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:223936740-223936760
64251 chr19 11728257 11728257 1 + G A rs143884853 11728254 + 11728234 11728274 41 CTTTTTGAATGTAAGGAATGCGGGAAGGCTTTGACTTGTCT CTTTTTGAATGTAAGGAATGCGGAAAGGCTTTGACTTGTCT < 41bp 0.732092780942711 0.505846003733292 0.5009912 0.21433663 prediction 0.452493554418838 Functional Loss - ZNF627 ENSG00000198551 CDS Human protein_coding chr19:11728254 chr19:11728257 synonymous SNV . 0 24 hm5C_associated_SNPs_77529 0 0 1 RBM15 POSTAR2 ENCODE chr19:11728250-11728324
64251 chr4 2065543 2065543 1 + C T PRAD 2065541 + 2065521 2065561 41 CGTGGTGGGCATTGTGGCTGCACGGGCCCACGAGGAGGACA CGTGGTGGGCATTGTGGCTGCATGGGCCCACGAGGAGGACA < 41bp 0.775989650558596 0.549758321992182 0.8725179 0.8977584 prediction 0.452462657132828 Functional Loss - NAT8L ENSG00000185818 CDS Human protein_coding chr4:2065541 chr4:2065543 nonsynonymous SNV 0.090 3 23 hm5C_associated_SNPs_77537 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:2065540-2065560
64251 chr20 47845307 47845307 1 + C T PRAD 47845305 + 47845285 47845325 41 AGCGTCTGATTTATAAACCCCGCCAGGCTCCAGTCACCCGC AGCGTCTGATTTATAAACCCCGTCAGGCTCCAGTCACCCGC < 41bp 0.862505661932325 0.636278855428833 0.46677378 0.24575514 prediction 0.452453613006984 Functional Loss - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47845305 chr20:47845307 synonymous SNV . 0 23 hm5C_associated_SNPs_77540 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47845292-47845317
64251 chr9 90341034 90341034 1 + A C rs372804383 90341033 + 90341013 90341053 41 AGAGTCAGGCGAAGCTGGGCCAGAACCGCGACCTCCGCAAC AGAGTCAGGCGAAGCTGGGCCCGAACCGCGACCTCCGCAAC < 41bp 0.760970644384817 0.534745822522656 0.799426 0.23252735 prediction 0.452449643724322 Functional Loss - CTSL ENSG00000135047 UTR5 Human protein_coding chr9:90341033 chr9:90341034 . . 0 22 hm5C_associated_SNPs_77541 0 0 1 RPS3 POSTAR2 ENCODE chr9:90341020-90341051
64251 chr6 26157263 26157263 1 + A T rs151006379 26157259 + 26157239 26157279 41 GGCAGCCAAGCCAAAGAAGGCGGCAGCCAAGAAAAAGTAGA GGCAGCCAAGCCAAAGAAGGCGGCTGCCAAGAAAAAGTAGA < 41bp 0.726220284919427 0.413791980538354 0.43886688 0.3590176 prediction 0.452440569838855 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26157259 chr6:26157263 synonymous SNV . 0 25 hm5C_associated_SNPs_77542 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:26157260-26157280
64251 chr7 44252661 44252661 1 + G A rs185204845 44252658 + 44252638 44252678 41 CAGGAAAGGGGGATGTTTTCCTGGTGTTTGGATGGTCAGCT CAGGAAAGGGGGATGTTTTCCTGATGTTTGGATGGTCAGCT < 41bp 0.752136550584734 0.525918684721438 0.8816203 0.8120749 prediction 0.452435731726592 Functional Loss - YKT6 ENSG00000106636 UTR3 Human protein_coding chr7:44252658 chr7:44252661 . . 0 24 hm5C_associated_SNPs_77543 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:44252625-44252663
64251 chr2 75186008 75186008 1 + G A UCEC 75186005 + 75185985 75186025 41 GACAGGAAGCCATCTTCATTCTGGCACGAGCCGCGGTGCGC GACAGGAAGCCATCTTCATTCTGACACGAGCCGCGGTGCGC < 41bp 0.745484259679205 0.519276456380318 0.32461107 0.11991942 prediction 0.452415606597774 Functional Loss - POLE4 ENSG00000115350 CDS Human protein_coding chr2:75186005 chr2:75186008 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_77547 0 0 3 DDX55 POSTAR2 ENCODE chr2:75185922-75186020
64251 chr8 97311963 97311963 1 + G A HNSC 97311960 + 97311940 97311980 41 CTCCCCAATTTTGCCGAGTGCTGGTGGGATCAAGTCATTCT CTCCCCAATTTTGCCGAGTGCTGATGGGATCAAGTCATTCT < 41bp 0.72619282868162 0.489232133657724 0.17351207 0.09083733 prediction 0.45238565736324 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97311960 chr8:97311963 stopgain 1.000 1 24 hm5C_associated_SNPs_77553 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:97311933-97311965
64251 chr6 33179753 33179753 1 + A T HNSC 33179749 + 33179729 33179769 41 AGTGAAAAGCAGTACACCATCTACATCGCACCTGGAGGCGG AGTGAAAAGCAGTACACCATCTACTTCGCACCTGGAGGCGG < 41bp 0.846092061649148 0.619910313630193 0.36716795 0.078786045 prediction 0.45236349603791 Functional Loss - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179749 chr6:33179753 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_77562 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr6:33179740-33179762
64251 chr6 26124473 26124473 1 + G A ACC 26124470 + 26124450 26124490 41 GTCTGATTGCAATGTCTGGACGTGGTAAGCAAGGAGGCAAA GTCTGATTGCAATGTCTGGACGTAGTAAGCAAGGAGGCAAA < 41bp 0.726178096192993 0.489679644556211 0.747857 0.3761678 prediction 0.452356192385986 Functional Loss - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124470 chr6:26124473 nonsynonymous SNV 0.206 2 24 hm5C_associated_SNPs_77564 0 0 53 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26124458-26124481
64251 chr21 45089829 45089829 1 + G T UCEC 45089827 + 45089807 45089847 41 TCTTCTACTGCATGTGGGTGCAGGATGAACCCCTTCTACAG TCTTCTACTGCATGTGGGTGCATGATGAACCCCTTCTACAG < 41bp 0.907120903468701 0.680944220643486 0.90340495 0.39895582 prediction 0.452353365650429 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45089827 chr21:45089829 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_77565 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45089811-45089847
64251 chr16 772507 772507 1 + G A UCEC 772504 + 772484 772524 41 GGATACCCATCCAGGCTGCCCCCGGACCTAGTTCTGCCCCC GGATACCCATCCAGGCTGCCCCCAGACCTAGTTCTGCCCCC < 41bp 0.768593611556143 0.542418093047535 0.45990202 0.13603804 prediction 0.452351037017217 Functional Loss - FAM173A ENSG00000103254 CDS Human protein_coding chr16:772504 chr16:772507 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_77566 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:772471-772507
64251 chr3 45038709 45038709 1 + C T STAD 45038707 + 45038687 45038727 41 AAAGACCCTCTGCATTAGTCCTCGGGAGCACTGCTGGGTTC AAAGACCCTCTGCATTAGTCCTTGGGAGCACTGCTGGGTTC < 41bp 0.852360037991112 0.626186087225019 0.19999775 0.15725261 prediction 0.452347901532187 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45038707 chr3:45038709 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_77567 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:45038700-45038720
64251 chr15 50786321 50786321 1 + G T CESC 50786318 + 50786298 50786338 41 GCAGAAGAATTTGGTATAATCATGAAAGCCCTGTGGACAGG GCAGAAGAATTTGGTATAATCATTAAAGCCCTGTGGACAGG < 41bp 0.726173658561388 0.346773667401652 0.1964578 0.08402866 prediction 0.452347317122776 Functional Loss - USP8 ENSG00000138592 CDS Human protein_coding chr15:50786318 chr15:50786321 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_77568 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:50786311-50786333
64251 chr8 73849625 73849625 1 + G A COAD 73849622 + 73849602 73849642 41 CAGTTGACATAACTGTGAACCTCGATGCCAGTGGCTCCCAG CAGTTGACATAACTGTGAACCTCAATGCCAGTGGCTCCCAG < 41bp 0.739463998874897 0.513293913254872 0.87456423 0.8415462 prediction 0.452340171240049 Functional Loss - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73849622 chr8:73849625 nonsynonymous SNV 0.394 0 24 hm5C_associated_SNPs_77571 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:73849602-73849640
64251 chr11 63964764 63964764 1 + G A LUAD 63964761 + 63964741 63964781 41 AGGCACTGAAAGAAAAAGAGCTGGGGAACGATGCCTACAAG AGGCACTGAAAGAAAAAGAGCTGAGGAACGATGCCTACAAG < 41bp 0.749419884274064 0.523249872549932 0.32831746 0.3087693 prediction 0.452340023448265 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63964761 chr11:63964764 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_77572 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:63964760-63964785
64251 chr2 177017375 177017375 1 + G A UCEC 177017372 + 177017352 177017392 41 CGGTGGGGAACCCAAGCGGTCCCGAACGGCCTACACCCGGC CGGTGGGGAACCCAAGCGGTCCCAAACGGCCTACACCCGGC < 41bp 0.726168005414617 0.496364990158239 0.31816486 0.107735574 prediction 0.452336010829234 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177017372 chr2:177017375 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_77573 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr2:177017375-177017376
64251 chr22 24125892 24125892 1 + G A rs28382576 24125889 + 24125869 24125909 41 TACAACCACCATGACAACTGCCGGGAGGGCCACGCAGGTCG TACAACCACCATGACAACTGCCGAGAGGGCCACGCAGGTCG < 41bp 0.726166408999626 0.478763188078857 0.45404863 0.21416691 prediction 0.452332817999253 Functional Loss - MMP11 ENSG00000267954 CDS Human other chr22:24125889 chr22:24125892 nonsynonymous SNV 0.927 0 24 hm5C_associated_SNPs_77574 0 0 1 DDX55 POSTAR2 ENCODE chr22:24125865-24125942
64251 chr19 10394362 10394362 1 + C T COAD 10394360 + 10394340 10394380 41 CGGTGCTGGTGAGGAGAGATCACCATGGAGCCAATTTCTCG CGGTGCTGGTGAGGAGAGATCATCATGGAGCCAATTTCTCG < 41bp 0.839308572468557 0.613147148434875 0.27487028 0.28211182 prediction 0.452322848067365 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394360 chr19:10394362 synonymous SNV . 0 23 hm5C_associated_SNPs_77579 0 0 5 NOL12 POSTAR2 ENCODE chr19:10394300-10394366
64251 chr19 30935952 30935952 1 + G A HNSC 30935949 + 30935929 30935969 41 CCCTCCTGGGATGCCTCAATCTCGTGCCGCCGCTGAAATCC CCCTCCTGGGATGCCTCAATCTCATGCCGCCGCTGAAATCC < 41bp 0.802040206274166 0.575879602530969 0.839221 0.2805637 prediction 0.452321207486394 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935949 chr19:30935952 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_77581 0 0 2 FUS POSTAR2 SRX029328 chr19:30935924-30935952
64251 chr17 42824479 42824479 1 + C T HNSC 42824477 + 42824457 42824497 41 CAAGGATGGAGAGCCAAGCCCACGATCAGCTGCCCACACCA CAAGGATGGAGAGCCAAGCCCATGATCAGCTGCCCACACCA < 41bp 0.829191705816139 0.603035352459303 0.24602368 0.11943337 prediction 0.452312706713671 Functional Loss - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42824477 chr17:42824479 stopgain 0.000 0 23 hm5C_associated_SNPs_77585 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:42824458-42824479
64251 chr5 76129575 76129575 1 + G A SKCM 76129572 + 76129552 76129592 41 CTCACCTCAAAGAAACACTCCAGGAAATCCAGCTCTTACTC CTCACCTCAAAGAAACACTCCAGAAAATCCAGCTCTTACTC < 41bp 0.773082003138596 0.546930220117128 0.28729725 0.1443305 prediction 0.452303566042936 Functional Loss - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76129572 chr5:76129575 synonymous SNV . 0 24 hm5C_associated_SNPs_77586 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:76129559-76129595
64251 chr12 56495503 56495503 1 + C T CESC 56495501 + 56495481 56495521 41 ACATGGATGTGGGGTCAGACCTCAGTGCCTCTCTGGGCAGC ACATGGATGTGGGGTCAGACCTTAGTGCCTCTCTGGGCAGC < 41bp 0.726151772719735 0.454383906621023 0.2665802 0.14899895 prediction 0.45230354543947 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56495501 chr12:56495503 synonymous SNV . 0 23 hm5C_associated_SNPs_77587 0 0 2 PTBP1 POSTAR2 ENCODE chr12:56495475-56495511
64251 chr5 176733460 176733460 1 + G A ESCA 176733457 + 176733437 176733477 41 AAAACACTTGTTGAGACAGCCAAGGAAGCCAAGGAGAAGGC AAAACACTTGTTGAGACAGCCAAAGAAGCCAAGGAGAAGGC < 41bp 0.744350777688311 0.518201750416271 0.593694 0.24301049 prediction 0.45229805454408 Functional Loss - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176733457 chr5:176733460 synonymous SNV . 0 24 hm5C_associated_SNPs_77589 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:176733440-176733460
64251 chr14 24771499 24771499 1 + G A ESCA 24771496 + 24771476 24771516 41 GACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCCCAAGA GACTCCTGGAGCAGGTCCTGCTGATGTTGGAGCCCCCAAGA < 41bp 0.795361000154769 0.569217408385358 0.7083208 0.5077237 prediction 0.452287183538821 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771496 chr14:24771499 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_77593 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:24771474-24771499
64251 chr16 2816252 2816252 1 + G A BLCA 2816249 + 2816229 2816269 41 AAGGTCCAGGACTTCAGTGACTCGACGAAGATCCCGGTCAA AAGGTCCAGGACTTCAGTGACTCAACGAAGATCCCGGTCAA < 41bp 0.741765503297849 0.515628782887193 0.303618 0.3451007 prediction 0.452273440821312 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816249 chr16:2816252 nonsynonymous SNV 0.978 3 24 hm5C_associated_SNPs_77597 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2816068-2816556
64251 chr17 48548430 48548430 1 + G A BLCA 48548427 + 48548407 48548447 41 GAGAACAGTCCCGTGACATTCGCGCACTTCCCTGAGGACAC GAGAACAGTCCCGTGACATTCGCACACTTCCCTGAGGACAC < 41bp 0.755597267143283 0.529461117677883 0.34499675 0.17116913 prediction 0.4522722989308 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48548427 chr17:48548430 synonymous SNV . 0 24 hm5C_associated_SNPs_77599 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48548424-48548457
64251 chr16 14738262 14738262 1 + T C DLBC 14738261 + 14738241 14738281 41 ACCTTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTCAG ACCTTGAGAGAGATGAACCTCCCAAAAGCACCGGCCCTCAG < 41bp 0.811586087313381 0.585451967718164 0.42420465 0.13681582 prediction 0.452268239190434 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14738261 chr16:14738262 nonsynonymous SNV 0.017 1 22 hm5C_associated_SNPs_77603 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:14738154-14738269
64251 chr12 27109584 27109584 1 + G T UCEC 27109581 + 27109561 27109601 41 GACAAATCAGAGAGTTGCAACAAGAAAACAAAGGTAAGATA GACAAATCAGAGAGTTGCAACAATAAAACAAAGGTAAGATA < 41bp 0.726133615045134 0.36166035413751 0.5915874 0.62130994 prediction 0.452267230090268 Functional Loss - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27109581 chr12:27109584 stopgain 0.998 1 24 hm5C_associated_SNPs_77604 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:27109561-27109585
64251 chr21 45553649 45553649 1 + G A LIHC 45553646 + 45553626 45553666 41 CTGCATTCACGTCCCTGTCCCCCGGCGGTCGGACGCCTTCC CTGCATTCACGTCCCTGTCCCCCAGCGGTCGGACGCCTTCC < 41bp 0.726132291163521 0.469977789529377 0.3150406 0.1058642 prediction 0.452264582327042 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45553646 chr21:45553649 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_77605 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45553579-45553667
64251 chr13 100038285 100038285 1 + G A rs75653253 100038282 + 100038262 100038302 41 GGGATGGAGAAGAACAACAGCAGGCTTCCTGGAGCCACATG GGGATGGAGAAGAACAACAGCAGACTTCCTGGAGCCACATG < 41bp 0.739977182090613 0.513847009498515 0.8539248 0.6841885 prediction 0.452260345184196 Functional Loss - UBAC2 ENSG00000134882 UTR3 Human protein_coding chr13:100038282 chr13:100038285 . . 0 24 hm5C_associated_SNPs_77608 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:100038279-100038307
64251 chr1 29585178 29585178 1 + G A PRAD 29585175 + 29585155 29585195 41 GCACCCTGGGCGTCTACGTGCGCGTTAATGGGGGCCCCCTG GCACCCTGGGCGTCTACGTGCGCATTAATGGGGGCCCCCTG < 41bp 0.72612915727261 0.482599552836934 0.555414 0.3140384 prediction 0.452258314545219 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29585175 chr1:29585178 nonsynonymous SNV 0.838 4 24 hm5C_associated_SNPs_77609 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:29585155-29585184
64251 chr1 29585177 29585177 1 + C T UCEC 29585175 + 29585155 29585195 41 GCACCCTGGGCGTCTACGTGCGCGTTAATGGGGGCCCCCTG GCACCCTGGGCGTCTACGTGCGTGTTAATGGGGGCCCCCTG < 41bp 0.72612915727261 0.470465921294059 0.555414 0.59827614 prediction 0.452258314545219 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29585175 chr1:29585177 synonymous SNV . 0 23 hm5C_associated_SNPs_77610 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:29585155-29585184
64251 chr12 121135208 121135208 1 + G A rs138111377 121135205 + 121135185 121135225 41 TAGCCAAGAAGGGAAGGAGACACGGGGATTTGGGGTTCTCT TAGCCAAGAAGGGAAGGAGACACAGGGATTTGGGGTTCTCT < 41bp 0.726124354640763 0.490760516146573 0.5863757 0.32429624 prediction 0.452248709281526 Functional Loss - MLEC ENSG00000256364 ncRNA_exonic Human antisense chr12:121135205 chr12:121135208 . . 0 24 hm5C_associated_SNPs_77613 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121135179-121135234
64251 chr4 56233865 56233865 1 + G A UCEC 56233862 + 56233842 56233882 41 AGTATAAGTGCCATGTTATTCTCGGCAATCTCAGGAAAAAT AGTATAAGTGCCATGTTATTCTCAGCAATCTCAGGAAAAAT < 41bp 0.734484539499511 0.508364366119038 0.30192587 0.12311253 prediction 0.452240346760945 Functional Loss - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56233862 chr4:56233865 nonsynonymous SNV 0.034 0 24 hm5C_associated_SNPs_77616 0 0 2 YBX3 POSTAR2 ENCODE chr4:56233846-56233871
64251 chr2 228137698 228137698 1 + C T SKCM 228137696 + 228137676 228137716 41 TGAGAAAGGGGACCAAGGTCCTCCAGGGGATCCTGGCTCCC TGAGAAAGGGGACCAAGGTCCTTCAGGGGATCCTGGCTCCC < 41bp 0.726106532006172 0.434765675804996 0.9445605 0.72694045 prediction 0.452213064012344 Functional Loss - COL4A3 ENSG00000169031 CDS Human protein_coding chr2:228137696 chr2:228137698 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_77622 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:228137692-228137730
64251 chr2 16082322 16082322 1 + G A SKCM 16082319 + 16082299 16082339 41 GCGGCCCCGACTCGACCCCCCCGGGGGAGGACATCTGGAAG GCGGCCCCGACTCGACCCCCCCGAGGGAGGACATCTGGAAG < 41bp 0.726101727046538 0.479132824061944 0.8609724 0.20416316 prediction 0.452203454093075 Functional Loss - MYCN ENSG00000134323 CDS Human protein_coding chr2:16082319 chr2:16082322 nonsynonymous SNV 0.939 3 24 hm5C_associated_SNPs_77624 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:16082292-16082335
64251 chr19 4652282 4652282 1 + A C KIRC 4652281 + 4652261 4652301 41 TGCACCAGGCCGTGGGTCCCCACCTGACCGCCAAGTCCCAC TGCACCAGGCCGTGGGTCCCCCCCTGACCGCCAAGTCCCAC < 41bp 0.801810050619368 0.575718232563315 0.102800936 0.04166776 prediction 0.452183636112107 Functional Loss - TNFAIP8L1 ENSG00000185361 CDS Human protein_coding chr19:4652281 chr19:4652282 nonsynonymous SNV 0.031 3 22 hm5C_associated_SNPs_77635 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:4652263-4652286
64251 chr17 7557506 7557506 1 + C T HNSC 7557503 + 7557483 7557523 41 CGGACCCAGCTGGGCAACTGCTCCGGCATTGGGGACTCCAC CGGACCCAGCTGGGCAACTGCTCTGGCATTGGGGACTCCAC < 41bp 0.741407071359419 0.515317613948049 0.5075559 0.24902883 prediction 0.452178914822741 Functional Loss - ATP1B2 ENSG00000129244 CDS Human protein_coding chr17:7557503 chr17:7557506 synonymous SNV . 0 24 hm5C_associated_SNPs_77637 0 0 4 IGF2BP1 POSTAR2 ENCODE chr17:7557481-7557562
64251 chr3 172025228 172025228 1 + C T rs36032820 172025226 + 172025206 172025246 41 TCACCACCCACAGCTGTGCACCCGAGTGTCCTTTCCCCCCT TCACCACCCACAGCTGTGCACCTGAGTGTCCTTTCCCCCCT < 41bp 0.726086589055267 0.441377670957229 0.030145109 0.020293266 prediction 0.452173178110534 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172025226 chr3:172025228 synonymous SNV . 0 23 hm5C_associated_SNPs_77638 0 0 4 DDX24 POSTAR2 ENCODE chr3:172025152-172025232
64251 chr6 142737023 142737023 1 + G A SKCM 142737020 + 142737000 142737040 41 CTCCTCTTCCTCCTAGATGGCTGGATCACCTCCTTCAATGT CTCCTCTTCCTCCTAGATGGCTGAATCACCTCCTTCAATGT < 41bp 0.763246763942043 0.537165824602578 0.05840242 0.036108136 prediction 0.452161878678929 Functional Loss - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142737020 chr6:142737023 stopgain 0.967 1 24 hm5C_associated_SNPs_77641 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:142737009-142737047
64251 chr2 3627722 3627722 1 + G A UCEC 3627719 + 3627699 3627739 41 GCCGTACTCTGACAGCTGTGCACGATGCCATCCTTGAGGAC GCCGTACTCTGACAGCTGTGCACAATGCCATCCTTGAGGAC < 41bp 0.764356543810145 0.538277109736558 0.0644362 0.018007904 prediction 0.452158868147174 Functional Loss - RPS7 ENSG00000171863 CDS Human protein_coding chr2:3627719 chr2:3627722 nonsynonymous SNV 0.893 2 24 hm5C_associated_SNPs_77642 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:3627688-3627731
64251 chr2 241534059 241534059 1 + G T LUSC 241534056 + 241534036 241534076 41 GTGGAGGAGGAGGAGTTCCTCAGGGAGTTTGACGAGCTCAC GTGGAGGAGGAGGAGTTCCTCAGTGAGTTTGACGAGCTCAC < 41bp 0.923755757994798 0.69767884750447 0.91586095 0.5161902 prediction 0.452153820980655 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241534056 chr2:241534059 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_77643 0 0 1 BUD13 POSTAR2 ENCODE chr2:241534015-241534118
64251 chr3 183873439 183873439 1 + A T BLCA 183873435 + 183873415 183873455 41 GCCAGAGCCATGGGCGAGACCAAGATCATCTACCACTTGGA GCCAGAGCCATGGGCGAGACCAAGTTCATCTACCACTTGGA < 41bp 0.86106892103468 0.634992072812606 0.78912765 0.37297243 prediction 0.452153696444148 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183873435 chr3:183873439 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_77644 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183873420-183873456
64251 chr11 65178932 65178932 1 + G A rs536039335 65178929 + 65178909 65178949 41 GCAACAGTCTCATGGGTCACCACGTGGGGAGGGCTGCCTCA GCAACAGTCTCATGGGTCACCACATGGGGAGGGCTGCCTCA < 41bp 0.75964804879274 0.533573487475141 0.7049608 0.90445876 prediction 0.452149122635198 Functional Loss - FRMD8 ENSG00000126391 UTR3 Human protein_coding chr11:65178929 chr11:65178932 . . 0 24 hm5C_associated_SNPs_77647 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr11:65178924-65178944
64251 chr16 72046132 72046132 1 + C T STAD 72046130 + 72046110 72046150 41 CACCTCCCTGGGGCTCCTTCCACGGGCCAGATTTCAAGACT CACCTCCCTGGGGCTCCTTCCATGGGCCAGATTTCAAGACT < 41bp 0.83838468522391 0.612310404796214 0.88134265 0.82125425 prediction 0.452148560855391 Functional Loss - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046130 chr16:72046132 nonsynonymous SNV 0.386 3 23 hm5C_associated_SNPs_77648 0 0 2 PPIG POSTAR2 ENCODE chr16:72046042-72046150
64251 chr1 156025075 156025075 1 + A C STAD 156025074 + 156025054 156025094 41 GCTGCTGAATAACGAGGGATCACTGCTGGCCTACTCTGGTT GCTGCTGAATAACGAGGGATCCCTGCTGGCCTACTCTGGTT < 41bp 0.726068284529867 0.468769029302718 0.4327548 0.29491168 prediction 0.452136569059735 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156025074 chr1:156025075 synonymous SNV . 0 22 hm5C_associated_SNPs_77650 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156025060-156025080
64251 chrX 151870029 151870029 1 + G T LUSC 151870027 + 151870007 151870047 41 GGGAGGGAAGACAGTATCTTCGGGGATCCCAAGAAGCTGCT GGGAGGGAAGACAGTATCTTCGTGGATCCCAAGAAGCTGCT < 41bp 0.90342367540017 0.677364065883737 0.8992164 0.21405095 prediction 0.452119219032865 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870027 chrX:151870029 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_77652 0 0 5 DHX30 POSTAR2 ENCODE chrX:151870028-151870040
64251 chr3 9803194 9803194 1 - A G STAD 9803195 - 9803175 9803215 41 GAAGTCCTGGCCCAGAAGCCCTACAGCAAGGCTGTGGATTG GAAGTCCTGGCCCAGAAGCCCCACAGCAAGGCTGTGGATTG < 41bp 0.726059471189899 0.455984367435208 0.8769768 0.14741641 prediction 0.452118942379798 Functional Loss - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803195 chr3:9803194 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_77653 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:9803163-9803211
64251 chr22 42967403 42967403 1 + G A rs137047 42967400 + 42967380 42967420 41 AAGGTCAGAGGAGGGGAGGGCTCGGGCAGCAGGGGATGGGC AAGGTCAGAGGAGGGGAGGGCTCAGGCAGCAGGGGATGGGC < 41bp 0.726054358796634 0.493199546211677 0.82768595 0.7980725 prediction 0.452108717593267 Functional Loss - SERHL2 ENSG00000182841 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr22:42967400 chr22:42967403 . . 0 24 hm5C_associated_SNPs_77659 0 0 4 AARS POSTAR2 ENCODE chr22:42967359-42967425
64251 chr14 70420231 70420231 1 + G A SKCM 70420228 + 70420208 70420248 41 GTGTTTGTCCCAGAGTGTGGCGAGGATGGCTCCTTTACCCA GTGTTTGTCCCAGAGTGTGGCGAAGATGGCTCCTTTACCCA < 41bp 0.72605099109867 0.46737667638363 0.8981781 0.6712081 prediction 0.45210198219734 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70420228 chr14:70420231 synonymous SNV . 0 24 hm5C_associated_SNPs_77662 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr14:70420189-70420232
64251 chr13 98009818 98009818 1 + C T SKCM 98009816 + 98009796 98009836 41 GGTACCAGCGCGGTCTTTAACCCCAGCGTCTTGCACTACCA GGTACCAGCGCGGTCTTTAACCTCAGCGTCTTGCACTACCA < 41bp 0.851464699013598 0.625414066627501 0.4263099 0.15918651 prediction 0.452101264772194 Functional Loss - MBNL2 ENSG00000139793 CDS Human protein_coding chr13:98009816 chr13:98009818 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_77663 0 0 3 IGF2BP1 POSTAR2 ENCODE chr13:98009810-98009886
64251 chr2 39893425 39893425 1 + G T LUAD 39893423 + 39893403 39893443 41 GGCGGGCTGGACGCCGAGTGCGGCCGGCCCCTCTTCGCCAC GGCGGGCTGGACGCCGAGTGCGTCCGGCCCCTCTTCGCCAC < 41bp 0.898763004788572 0.67271342963395 0.8707837 0.2644853 prediction 0.452099150309245 Functional Loss - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39893423 chr2:39893425 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_77664 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr2:39893420-39893440
64251 chrX 51640071 51640071 1 + G T LUSC 51640069 + 51640049 51640089 41 GGCCAATTCCACCTGACTGGCAGAACCTGCGCCCCTCGCCT GGCCAATTCCACCTGACTGGCATAACCTGCGCCCCTCGCCT < 41bp 0.726047149858451 0.362526665934993 0.4761844 0.16630378 prediction 0.452094299716903 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640069 chrX:51640071 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_77666 0 0 1 YBX3 POSTAR2 ENCODE chrX:51639990-51640116
64251 chr6 7542253 7542253 1 + G A rs77445784 7542250 + 7542230 7542270 41 TACGAGGTGACCAGCGGCGGCGGGGGCACCAGCAGGATGTA TACGAGGTGACCAGCGGCGGCGGAGGCACCAGCAGGATGTA < 41bp 0.754364363291161 0.528319257292738 0.91218877 0.90935385 prediction 0.452090211996845 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7542250 chr6:7542253 synonymous SNV . 0 24 hm5C_associated_SNPs_77667 8 0 2 DDX3X POSTAR2 ENCODE chr6:7542220-7542266
64251 chr19 8553643 8553643 1 + G C BLCA 8553642 + 8553622 8553662 41 GGGTGTGGCGTGGTTAAGTTCGAGTCGCCAGAGGTGGCCGA GGGTGTGGCGTGGTTAAGTTCCAGTCGCCAGAGGTGGCCGA < 41bp 0.876394956974713 0.650362266921759 0.4286657 0.2460686 prediction 0.452065380105909 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8553642 chr19:8553643 nonsynonymous SNV 0.921 4 22 hm5C_associated_SNPs_77673 0 0 22 TARDBP POSTAR2 DRA001158,DRS012387 chr19:8553585-8553996
64251 chrX 70443602 70443602 1 + G T ESCA 70443600 + 70443580 70443620 41 CCTTGCTCAGTGGCGTGAACCGGCATTCTACTGCCATTGGC CCTTGCTCAGTGGCGTGAACCGTCATTCTACTGCCATTGGC < 41bp 0.896712297165984 0.670682795753132 0.56187993 0.4627702 prediction 0.452059002825703 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70443600 chrX:70443602 synonymous SNV . 0 23 hm5C_associated_SNPs_77676 0 0 1 RPS3 POSTAR2 ENCODE chrX:70443577-70443638
64251 chr6 30539327 30539327 1 + G T SKCM 30539324 + 30539304 30539344 41 TGGATCGGGGACGGAGAGAGCACGAGCCCATCAGGTGAGGC TGGATCGGGGACGGAGAGAGCACTAGCCCATCAGGTGAGGC < 41bp 0.72602162591374 0.438385035621 0.43239772 0.2707333 prediction 0.45204325182748 Functional Loss - ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30539324 chr6:30539327 synonymous SNV . 0 24 hm5C_associated_SNPs_77678 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:30539303-30539332
64251 chr21 37757707 37757707 1 + G C rs541601358 37757703 + 37757683 37757723 41 GGCGCGCGGGAAGCGGCGCGCGCTGCGCGGGAGGTGACGGT GGCGCGCGGGAAGCGGCGCGCGCTCCGCGGGAGGTGACGGT < 41bp 0.726017261110616 0.450000598681098 0.80909353 0.58960426 prediction 0.452034522221233 Functional Loss - CHAF1B ENSG00000159259 UTR5 Human protein_coding chr21:37757703 chr21:37757707 . . 0 25 hm5C_associated_SNPs_77681 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr21:37757680-37757720
64251 chr3 69153909 69153909 1 + A C rs189129559 69153908 + 69153888 69153928 41 TACCACCCAATTATCTATGGCAGCATGCATGTATAGGCCGA TACCACCCAATTATCTATGGCCGCATGCATGTATAGGCCGA < 41bp 0.726016937320362 0.475200560918231 0.074103534 0.10785478 prediction 0.452033874640725 Functional Loss - ARL6IP5 ENSG00000144746 UTR3 Human protein_coding chr3:69153908 chr3:69153909 . . 0 22 hm5C_associated_SNPs_77682 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:69153883-69153909
64251 chr14 24619997 24619997 1 + G A STAD 24619994 + 24619974 24620014 41 ACCCCCCAAGCCTGGGCCCCCACGACGCCTTAGTGCCCCCC ACCCCCCAAGCCTGGGCCCCCACAACGCCTTAGTGCCCCCC < 41bp 0.783384555969739 0.557370073079396 0.07833275 0.10786268 prediction 0.452028965780686 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619994 chr14:24619997 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_77687 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:24619969-24620007
64251 chr4 88379096 88379096 1 + C T UCEC 88379094 + 88379074 88379114 41 GAAGCTTTATGCCAGTCACTCTCAATTCATCAAACTTGTGG GAAGCTTTATGCCAGTCACTCTTAATTCATCAAACTTGTGG < 41bp 0.726014310649205 0.448968265971272 0.09862417 0.07101387 prediction 0.45202862129841 Functional Loss - NUDT9 ENSG00000170502 CDS Human protein_coding chr4:88379094 chr4:88379096 stopgain 0.981 0 23 hm5C_associated_SNPs_77689 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr4:88379084-88379117
64251 chr20 56140474 56140474 1 + G A LGG 56140471 + 56140451 56140491 41 GCTACAACTTCGGCAAATACCTGGCCCACTGGCTTAGCATG GCTACAACTTCGGCAAATACCTGACCCACTGGCTTAGCATG < 41bp 0.726011853040506 0.485889676856461 0.58839315 0.11169678 prediction 0.452023706081011 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140471 chr20:56140474 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_77691 0 0 2 GRWD1 POSTAR2 ENCODE chr20:56140429-56140519
64251 chr12 122413223 122413223 1 + G A LUAD 122413220 + 122413200 122413240 41 ATGGTCTGCTGTCTGGTGGCCGGGAAGGAAAATTCTACAGG ATGGTCTGCTGTCTGGTGGCCGGAAAGGAAAATTCTACAGG < 41bp 0.767852313032915 0.541840556001939 0.30498433 0.25397947 prediction 0.452023514061951 Functional Loss - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122413220 chr12:122413223 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_77692 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:122413199-122413229
64251 chr10 46222883 46222883 1 + G A BLCA 46222880 + 46222860 46222900 41 TGCAGATGAACCGGACGACCCCCGACCAGGAGCTGGTGCCG TGCAGATGAACCGGACGACCCCCAACCAGGAGCTGGTGCCG < 41bp 0.789869509924441 0.563861316220443 0.1492286 0.026863009 prediction 0.452016387407996 Functional Loss - WASHC2C ENSG00000172661 CDS Human protein_coding chr10:46222880 chr10:46222883 nonsynonymous SNV 0.230 2 24 hm5C_associated_SNPs_77694 0 0 4 EFTUD2 POSTAR2 ENCODE chr10:46222832-46222886
64251 chr1 90400236 90400236 1 + G A UCEC 90400233 + 90400213 90400253 41 AGACTGCTTTTAGCTTTCTTCGCGATCACTTGAGATGCCTT AGACTGCTTTTAGCTTTCTTCGCAATCACTTGAGATGCCTT < 41bp 0.725993621693989 0.498335047255629 0.6607114 0.2884627 prediction 0.451987243387979 Functional Loss - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90400233 chr1:90400236 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_77697 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:90400220-90400240
64251 chrX 70517280 70517280 1 + G T CESC 70517277 + 70517257 70517297 41 GGATGGAAGAGCTGCACAACCAAGAGGTGCAAAAACGAAAG GGATGGAAGAGCTGCACAACCAATAGGTGCAAAAACGAAAG < 41bp 0.926751243753298 0.700757755432385 0.83206254 0.14445221 prediction 0.451986976641824 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70517277 chrX:70517280 stopgain 1.000 1 24 hm5C_associated_SNPs_77698 0 0 11 U2AF2 POSTAR2 GSE61603,GSM1509288 chrX:70517280-70517360
64251 chr1 110038388 110038388 1 + G T CESC 110038386 + 110038366 110038406 41 CTATGTTCACAGTTCTGCCTCTGCATGGCTGAAGCCATCCT CTATGTTCACAGTTCTGCCTCTTCATGGCTGAAGCCATCCT < 41bp 0.725988174854509 0.416469649093908 0.30550042 0.16153932 prediction 0.451976349709018 Functional Loss - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110038386 chr1:110038388 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_77704 0 0 2 BUD13 POSTAR2 ENCODE chr1:110038352-110038458
64251 chr17 40714723 40714723 1 + C T BLCA 40714721 + 40714701 40714741 41 CGCCTGGCCTCCATCCTGACCTCGGCGGCCCGGCTGGTGAA CGCCTGGCCTCCATCCTGACCTTGGCGGCCCGGCTGGTGAA < 41bp 0.809802780267994 0.58382052190241 0.24511829 0.096394986 prediction 0.451964516731168 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40714721 chr17:40714723 nonsynonymous SNV 0.944 1 23 hm5C_associated_SNPs_77707 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr8 74888464 74888464 1 + G A rs150775418 74888461 + 74888441 74888481 41 AGTCGGGTGGGAAGCCGTGTCTCGCAGTCGTGGACTCGTGC AGTCGGGTGGGAAGCCGTGTCTCACAGTCGTGGACTCGTGC < 41bp 0.765683680527878 0.539710428233046 0.4982655 0.3127886 prediction 0.451946504589665 Functional Loss - TMEM70 ENSG00000175606 UTR5 Human protein_coding chr8:74888461 chr8:74888464 . . 0 24 hm5C_associated_SNPs_77714 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:74888458-74888480
64251 chr8 145724317 145724317 1 - C T COAD 145724320 - 145724300 145724340 41 CAGGAGCTGCTGCACCATCTCTCGGAAATCATCAATGCAGC CAGGAGCTGCTGCACCATCTCTCAGAAATCATCAATGCAGC < 41bp 0.769574139904317 0.543607786706357 0.1329071 0.10789743 prediction 0.451932706395921 Functional Loss - PPP1R16A ENSG00000160972 CDS Human protein_coding chr8:145724320 chr8:145724317 stopgain 0.246 0 24 hm5C_associated_SNPs_77718 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:145724295-145724346
64251 chrX 70316439 70316439 1 + G A UCEC 70316436 + 70316416 70316456 41 CCGCGATCATAGACCTAGATCCCGACTTCGAACCCCAGAGC CCGCGATCATAGACCTAGATCCCAACTTCGAACCCCAGAGC < 41bp 0.725963898493766 0.473759148079406 0.2423478 0.14228389 prediction 0.451927796987533 Functional Loss - FOXO4 ENSG00000184481 CDS Human protein_coding chrX:70316436 chrX:70316439 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_77719 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chrX:70316420-70316440
64251 chr22 25017006 25017006 1 + G A rs114926965 25017003 + 25016983 25017023 41 GCCTTCTACAACGGCAGCCTCACGGCCCAGATTGTGAAGGA GCCTTCTACAACGGCAGCCTCACAGCCCAGATTGTGAAGGA < 41bp 0.725962630680935 0.490101059399998 0.26681387 0.11694002 prediction 0.451925261361871 Functional Loss - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25017003 chr22:25017006 synonymous SNV . 0 24 hm5C_associated_SNPs_77720 0 0 1 SND1 POSTAR2 ENCODE chr22:25016902-25017013
64251 chr11 76507144 76507144 1 + G A rs148661218 76507141 + 76507121 76507161 41 ACAGTCAGGGCCGGGCACTACACGTGGACCTCTCCCACAAC ACAGTCAGGGCCGGGCACTACACATGGACCTCTCCCACAAC < 41bp 0.797376995715761 0.571418779669922 0.5470432 0.20394886 prediction 0.451916432091676 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507141 chr11:76507144 nonsynonymous SNV 0.884 2 24 hm5C_associated_SNPs_77722 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76507119-76507299
64251 chr6 43416866 43416866 1 + G C OV 43416862 + 43416842 43416882 41 CAGGTGGTCTGGATGGTGAGCTGGGTGAGGGGGGCCGGAGC CAGGTGGTCTGGATGGTGAGCTGGCTGAGGGGGGCCGGAGC < 41bp 0.725956880393056 0.42585237487839 0.908957 0.8768883 prediction 0.451913760786111 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43416862 chr6:43416866 nonsynonymous SNV 0.653 3 25 hm5C_associated_SNPs_77725 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:43416853-43416879
64251 chr9 103348507 103348507 1 + G A ESCA 103348504 + 103348484 103348524 41 GGCTGAAGGTGAGGAATGTGCCAGGGAGATGGGTGTGGACA GGCTGAAGGTGAGGAATGTGCCAAGGAGATGGGTGTGGACA < 41bp 0.782478861731096 0.556524337221539 0.7200315 0.19148383 prediction 0.451909049019114 Functional Loss - CAVIN4 ENSG00000170681 CDS Human protein_coding chr9:103348504 chr9:103348507 nonsynonymous SNV 0.746 0 24 hm5C_associated_SNPs_77727 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:103348482-103348520
64251 chr5 154173201 154173201 1 + A C PRAD 154173197 + 154173177 154173217 41 ATTACAAATAGACATGAAGCCTGAAGTGCCCAGAGAGAAAC ATTACAAATAGACATGAAGCCTGACGTGCCCAGAGAGAAAC < 41bp 0.725942812160939 0.299656149732274 0.05861181 0.08574659 prediction 0.451885624321878 Functional Loss - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154173197 chr5:154173201 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_77733 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:154173162-154173210
64251 chr11 32608616 32608616 1 + C T UCEC 32608614 + 32608594 32608634 41 GCTGAGATTTCAGAAGAGAACTCGGAAGGTGGACTTCATGT GCTGAGATTTCAGAAGAGAACTTGGAAGGTGGACTTCATGT < 41bp 0.836842548819838 0.610900736736115 0.3821867 0.27695477 prediction 0.451883624167447 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32608614 chr11:32608616 nonsynonymous SNV 0.828 2 23 hm5C_associated_SNPs_77734 0 0 36 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32608555-32608690
64251 chr8 144732969 144732969 1 + C T SKCM 144732967 + 144732947 144732987 41 ATCGCTCAGACCTTATTGAACACCAGAGAATTCACACCGGA ATCGCTCAGACCTTATTGAACATCAGAGAATTCACACCGGA < 41bp 0.725933263583033 0.445970733395275 0.26486182 0.33000225 prediction 0.451866527166066 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732967 chr8:144732969 synonymous SNV . 0 23 hm5C_associated_SNPs_77736 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:144732952-144732976
64251 chr1 74670495 74670495 1 + G T UCEC 74670492 + 74670472 74670512 41 TTTTTGTCAACAGGACTTTGCTGGGGGTGACATTGCCGATC TTTTTGTCAACAGGACTTTGCTGTGGGTGACATTGCCGATC < 41bp 0.725932186719527 0.346192311166214 0.92022765 0.099666744 prediction 0.451864373439054 Functional Loss - FPGT ENSG00000254685 CDS Human protein_coding chr1:74670492 chr1:74670495 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_77738 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:74670489-74670500
64251 chr7 94297385 94297385 1 + G A rs184904316 94297382 + 94297362 94297402 41 CTGTAGCCCTGGCATGTGCACACGGACATTTGCCACCACTG CTGTAGCCCTGGCATGTGCACACAGACATTTGCCACCACTG < 41bp 0.745312541846686 0.519381864907419 0.39502394 0.15794542 prediction 0.451861353878534 Functional Loss - PEG10 ENSG00000242265 UTR3 Human protein_coding chr7:94297382 chr7:94297385 . . 0 24 hm5C_associated_SNPs_77739 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94297297-94297532
64251 chr19 35550894 35550894 1 + C T CESC 35550892 + 35550872 35550912 41 CAGAGGCTGCTGGAGGTCATCTCCGTGTGGTGAGGAGGGCA CAGAGGCTGCTGGAGGTCATCTTCGTGTGGTGAGGAGGGCA < 41bp 0.725929380250899 0.448144823812233 0.87560594 0.34502107 prediction 0.451858760501798 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35550892 chr19:35550894 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_77741 0 0 1 PPIG POSTAR2 ENCODE chr19:35550888-35550900
64251 chr14 23235906 23235906 1 + G A HNSC 23235903 + 23235883 23235923 41 CGCAAAAGCAAGTCCTCTTCCGGGCAAAATGGCGATGGGAC CGCAAAAGCAAGTCCTCTTCCGGACAAAATGGCGATGGGAC < 41bp 0.776825198100377 0.550898041593175 0.8744799 0.3392464 prediction 0.451854313014403 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23235903 chr14:23235906 nonsynonymous SNV 0.836 0 24 hm5C_associated_SNPs_77742 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr14:23235900-23235940
64251 chr17 7286770 7286770 1 + C T rs111534860 7286768 + 7286748 7286788 41 TTGGAGGTTTTGCCCCTGAGCACAAGGAGCCCACCCTGCCC TTGGAGGTTTTGCCCCTGAGCATAAGGAGCCCACCCTGCCC < 41bp 0.795267976690054 0.569341261046089 0.27831507 0.3292275 prediction 0.451853431287929 Functional Loss - TNK1 ENSG00000174292 CDS Human protein_coding chr17:7286768 chr17:7286770 synonymous SNV . 0 23 hm5C_associated_SNPs_77743 0 0 2 BUD13 POSTAR2 ENCODE chr17:7286708-7286796
64251 chr2 27278661 27278661 1 + T C rs201486305 27278660 + 27278640 27278680 41 TCTCTACCACCATGTGCACTCTCGTCTGAACTCCCAGAGTT TCTCTACCACCATGTGCACTCCCGTCTGAACTCCCAGAGTT < 41bp 0.725920390189948 0.471086906816138 0.16871843 0.19492522 prediction 0.451840780379897 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278660 chr2:27278661 synonymous SNV . 0 22 hm5C_associated_SNPs_77750 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:27278630-27278663
64251 chr2 27278663 27278663 1 + G A LGG 27278660 + 27278640 27278680 41 TCTCTACCACCATGTGCACTCTCGTCTGAACTCCCAGAGTT TCTCTACCACCATGTGCACTCTCATCTGAACTCCCAGAGTT < 41bp 0.725920390189948 0.482336274813677 0.16871843 0.11977944 prediction 0.451840780379897 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278660 chr2:27278663 nonsynonymous SNV 0.521 1 24 hm5C_associated_SNPs_77751 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:27278630-27278663
64251 chr1 150470035 150470035 1 + G A OV 150470032 + 150470012 150470052 41 TATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACT TATGCCCATCGTGGTTTCTCCGAAGTGAAAACTCCCACACT < 41bp 0.798107328310751 0.57219678634534 0.92315483 0.42218044 prediction 0.451821083930823 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150470032 chr1:150470035 synonymous SNV . 0 24 hm5C_associated_SNPs_77758 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:150470019-150470039
64251 chr15 40477831 40477831 1 + G A rs1801376 40477828 + 40477808 40477848 41 TCCATATGTGGAAGAGACTGCACGACAGCCAGTTATGTGAG TCCATATGTGGAAGAGACTGCACAACAGCCAGTTATGTGAG < 41bp 0.773545541212655 0.547636719411739 0.2999118 0.19520202 prediction 0.451817643601833 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40477828 chr15:40477831 nonsynonymous SNV 0.977 0 24 hm5C_associated_SNPs_77759 2 0 2 PRPF8 POSTAR2 ENCODE chr15:40477809-40477866
64251 chr19 42580354 42580354 1 + G C rs529803887 42580350 + 42580330 42580370 41 ACGGAGCAGGCGAGAGGCGACGGCGAGAGCTAGAGCGGGCG ACGGAGCAGGCGAGAGGCGACGGCCAGAGCTAGAGCGGGCG < 41bp 0.72590810290569 0.442135366479378 0.5632505 0.432699 prediction 0.45181620581138 Functional Loss - ZNF574 ENSG00000105732 UTR5 Human protein_coding chr19:42580350 chr19:42580354 . . 0 25 hm5C_associated_SNPs_77760 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:42580320-42580360
64251 chr19 15795987 15795987 1 + C T UCEC 15795985 + 15795965 15796005 41 TGCAAGAGCTTCTGAAGGACCGCGATCCTAAAGAGATTGAA TGCAAGAGCTTCTGAAGGACCGTGATCCTAAAGAGATTGAA < 41bp 0.83732469251934 0.611419673207101 0.24120575 0.19562653 prediction 0.451810038624477 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15795985 chr19:15795987 synonymous SNV . 0 23 hm5C_associated_SNPs_77763 0 0 3 PPIG POSTAR2 ENCODE chr19:15795943-15795992
64251 chr20 5931470 5931470 1 + G C rs113221796 5931466 + 5931446 5931486 41 AGATGGGGTTCAGCACCGCGCGGGGACGACAGGAAAGCTGC AGATGGGGTTCAGCACCGCGCGGGCACGACAGGAAAGCTGC < 41bp 0.857470607797493 0.631566165766177 0.8949646 0.8452669 prediction 0.451808884062633 Functional Loss - MCM8 ENSG00000125885 UTR5 Human protein_coding chr20:5931466 chr20:5931470 . . 0 25 hm5C_associated_SNPs_77766 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917662 chr20:5931460-5931480
64251 chr2 37471013 37471013 1 + C T SKCM 37471010 + 37470990 37471030 41 GTTATTTTGTGTTTAGAAAACACCACAGGGATGGCGAGAAG GTTATTTTGTGTTTAGAAAACACTACAGGGATGGCGAGAAG < 41bp 0.72590408834659 0.494969262455853 0.032268047 0.17696449 prediction 0.45180817669318 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37471010 chr2:37471013 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_77767 0 0 2 U2AF2 POSTAR2 ENCODE chr2:37470990-37471056
64251 chr18 39575919 39575919 1 + C T STAD 39575917 + 39575897 39575937 41 TAAGAAGTGGACCTTCTGACCACGATCTGAAACCCAATGCT TAAGAAGTGGACCTTCTGACCATGATCTGAAACCCAATGCT < 41bp 0.725902882330555 0.460060641572863 0.3090036 0.2937609 prediction 0.45180576466111 Functional Loss - PIK3C3 ENSG00000078142 CDS Human protein_coding chr18:39575917 chr18:39575919 synonymous SNV . 0 23 hm5C_associated_SNPs_77768 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:39575910-39575947
64251 chr2 160084388 160084388 1 + G A CESC 160084385 + 160084365 160084405 41 GTATGCCTTAAGAAAGTTTCCTCGAGAAGGATTCGGAGAGG GTATGCCTTAAGAAAGTTTCCTCAAGAAGGATTCGGAGAGG < 41bp 0.726872819106426 0.500976974844854 0.2847885 0.029851854 prediction 0.451791688523143 Functional Loss - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160084385 chr2:160084388 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_77773 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:160084380-160084417
64251 chr9 140137264 140137264 1 + G A LUSC 140137261 + 140137241 140137281 41 CAGCTCGTAGAAAACACAGACGAGACCTACTGCATTGATAA CAGCTCGTAGAAAACACAGACGAAACCTACTGCATTGATAA < 41bp 0.730875181340517 0.504985692405428 0.110099226 0.05590868 prediction 0.451778977870177 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137261 chr9:140137264 synonymous SNV . 0 24 hm5C_associated_SNPs_77775 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140137223-140137270
64251 chr7 112090758 112090758 1 + G T UCEC 112090755 + 112090735 112090775 41 CGTCCCACGATGCCGAAGAACAAGAAGCGGAACACTCCCCA CGTCCCACGATGCCGAAGAACAATAAGCGGAACACTCCCCA < 41bp 0.882712494124287 0.656823747278064 0.4943858 0.2815259 prediction 0.451777493692446 Functional Loss - IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112090755 chr7:112090758 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_77776 0 0 2 GRWD1 POSTAR2 ENCODE chr7:112090715-112090804
64251 chr8 99961236 99961236 1 + C T SKCM 99961234 + 99961214 99961254 41 CTCCACCCGTCGCTGCAGCTCACCAATTACTCCTTCCTGCA CTCCACCCGTCGCTGCAGCTCATCAATTACTCCTTCCTGCA < 41bp 0.849308706597768 0.623427619546838 0.31509727 0.17520747 prediction 0.451762174101859 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961234 chr8:99961236 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_77780 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585664 chr8:99961231-99961252
64251 chr20 61468560 61468560 1 + C T GBM 61468558 + 61468538 61468578 41 CTCCATTGGTCACCCTGGCGCTCGAGGACCCCCTGGATACC CTCCATTGGTCACCCTGGCGCTTGAGGACCCCCTGGATACC < 41bp 0.82782544386994 0.601960104263974 0.081567585 0.054389745 prediction 0.451730679211933 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468558 chr20:61468560 stopgain 0.455 1 23 hm5C_associated_SNPs_77786 0 0 1 SND1 POSTAR2 ENCODE chr20:61468544-61468617
64251 chr7 881705 881705 1 + G A STAD 881702 + 881682 881722 41 CAGCCTGCAGGATGCTGTGACTCGACGGCCTCCTGTATTGG CAGCCTGCAGGATGCTGTGACTCAACGGCCTCCTGTATTGG < 41bp 0.766369598034587 0.540508493108341 0.8386269 0.9302151 prediction 0.451722209852491 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:881702 chr7:881705 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_77788 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:881686-881714
64251 chr5 134033600 134033600 1 + C T COAD 134033598 + 134033578 134033618 41 TTCTCTTCCAGGTTGTATTTCTCGGTATTCAGCAGGTAGTG TTCTCTTCCAGGTTGTATTTCTTGGTATTCAGCAGGTAGTG < 41bp 0.725851218230339 0.438394226298307 0.09763068 0.09826043 prediction 0.451702436460678 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134033598 chr5:134033600 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_77794 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:134033600-134033620
64251 chr5 134033601 134033601 1 + G A GBM 134033598 + 134033578 134033618 41 TTCTCTTCCAGGTTGTATTTCTCGGTATTCAGCAGGTAGTG TTCTCTTCCAGGTTGTATTTCTCAGTATTCAGCAGGTAGTG < 41bp 0.725851218230339 0.486412184180449 0.09763068 0.094216645 prediction 0.451702436460678 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134033598 chr5:134033601 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_77795 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:134033600-134033620
64251 chr19 17392883 17392883 1 + T C COAD 17392882 + 17392862 17392902 41 GCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGACCCT GCAGGGCAGTAGAGGAGCTGCCGCGCTGCGGCGCGGACCCT < 41bp 0.758823984214204 0.532973784708407 0.80689895 0.4126323 prediction 0.451700399011593 Functional Loss - ANKLE1 ENSG00000160117 CDS Human protein_coding chr19:17392882 chr19:17392883 nonsynonymous SNV 0.716 4 22 hm5C_associated_SNPs_77796 0 0 2 PPIG POSTAR2 ENCODE chr19:17392861-17392997
64251 chr20 61595023 61595023 1 + C T UCEC 61595021 + 61595001 61595041 41 CCTTCTTCGAGGAGACCTTCCCCGACGCCAAGGTGAGTCGG CCTTCTTCGAGGAGACCTTCCCTGACGCCAAGGTGAGTCGG < 41bp 0.725844253007777 0.452808983732425 0.2828973 0.25353545 prediction 0.451688506015553 Functional Loss - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61595021 chr20:61595023 synonymous SNV . 0 23 hm5C_associated_SNPs_77800 0 0 5 GRWD1 POSTAR2 ENCODE chr20:61595016-61595033
64251 chr14 99976510 99976510 1 + C T ESCA 99976508 + 99976488 99976528 41 CTGCAGACCGGAAGCCTCCCCTCGCTGCTGCCTTAGGTGAG CTGCAGACCGGAAGCCTCCCCTTGCTGCTGCCTTAGGTGAG < 41bp 0.725842688053704 0.453917205173814 0.75499886 0.28395066 prediction 0.451685376107408 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99976508 chr14:99976510 synonymous SNV . 0 23 hm5C_associated_SNPs_77801 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:99976493-99976519
64251 chrX 99925838 99925838 1 + A C THYM 99925834 + 99925814 99925854 41 CGCCTCACTCGCTCCTACTTCAACATGGTGTTGATTGACAA CGCCTCACTCGCTCCTACTTCAACCTGGTGTTGATTGACAA < 41bp 0.725841595024186 0.30674884313825 0.18026295 0.35807073 prediction 0.451683190048373 Functional Loss - SRPX2 ENSG00000102359 CDS Human protein_coding chrX:99925834 chrX:99925838 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_77804 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:99925832-99925860
64251 chr2 27434983 27434983 1 + G C rs562421855 27434979 + 27434959 27434999 41 CTGAGGGAGTCTGCAGTCGGCTCCGGGAAGCCGCGCGGCGA CTGAGGGAGTCTGCAGTCGGCTCCCGGAAGCCGCGCGGCGA < 41bp 0.794999383247963 0.569160590610405 0.5700714 0.15460315 prediction 0.451677585275116 Functional Loss - ATRAID;SLC5A6 ENSG00000138074;ENSG00000138085 UTR5 Human other chr2:27434979 chr2:27434983 . . 0 25 hm5C_associated_SNPs_77805 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:27434960-27435000
64251 chr17 7578443 7578443 1 - A G HNSC 7578444 - 7578424 7578464 41 CGCGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACAT CGCGTCCGCGCCATGGCCATCCACAAGCAGTCACAGCACAT < 41bp 0.791531440292176 0.565695295336961 0.9150708 0.15695018 prediction 0.45167228991043 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7578444 chr17:7578443 nonsynonymous SNV 0.690 5 22 hm5C_associated_SNPs_77807 14 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:7578422-7578456
64251 chr21 44324331 44324331 1 + G A UCEC 44324328 + 44324308 44324348 41 GCAGCGCTGAAGCTTGAGGCCGAGGGCGAGGCCATGGAAGA GCAGCGCTGAAGCTTGAGGCCGAAGGCGAGGCCATGGAAGA < 41bp 0.776600957537864 0.550767324919164 0.3373403 0.13580185 prediction 0.451667265237398 Functional Loss - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324328 chr21:44324331 synonymous SNV . 0 24 hm5C_associated_SNPs_77809 0 0 2 GRWD1 POSTAR2 ENCODE chr21:44324261-44324384
64251 chr9 4685143 4685143 1 + G A ACC 4685140 + 4685120 4685160 41 TGGAGCACGGATGCCATTAGCAAGGATGTTTTTAATAAGGT TGGAGCACGGATGCCATTAGCAAAGATGTTTTTAATAAGGT < 41bp 0.725831760544146 0.494062340929579 0.7850348 0.53362375 prediction 0.451663521088292 Functional Loss - CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4685140 chr9:4685143 synonymous SNV . 0 24 hm5C_associated_SNPs_77813 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:4685103-4685158
64251 chr2 228212087 228212087 1 + G T HNSC 228212084 + 228212064 228212104 41 ACCAGCAGATCTTGGATGTGCTGGATGAAAATCGCAGGTGA ACCAGCAGATCTTGGATGTGCTGTATGAAAATCGCAGGTGA < 41bp 0.913321140014984 0.687492806337906 0.52003235 0.26735312 prediction 0.451656667354156 Functional Loss - MFF ENSG00000168958 CDS Human protein_coding chr2:228212084 chr2:228212087 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77814 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr2:228212056-228212094
64251 chr11 94862455 94862455 1 + G T LUAD 94862452 + 94862432 94862472 41 CCCTGGAAGGTGCTCAAGGTCGTGGCCAAAGTCATCAGGGC CCCTGGAAGGTGCTCAAGGTCGTTGCCAAAGTCATCAGGGC < 41bp 0.725822296549294 0.326400474181286 0.49000153 0.18615213 prediction 0.451644593098587 Functional Loss - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94862452 chr11:94862455 synonymous SNV . 0 24 hm5C_associated_SNPs_77817 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:94862432-94862463
64251 chr20 31023545 31023545 1 + G A UCEC 31023542 + 31023522 31023562 41 TCTGACTTTGAAGGTCACCTCACGGAGGACAGCAGTGAGGC TCTGACTTTGAAGGTCACCTCACAGAGGACAGCAGTGAGGC < 41bp 0.72581556448002 0.49185501861782 0.90256596 0.31810063 prediction 0.451631128960039 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31023542 chr20:31023545 synonymous SNV . 0 24 hm5C_associated_SNPs_77820 0 0 6 EIF3H POSTAR2 ENCODE chr20:31023545-31023577
64251 chr20 54941327 54941327 1 + C T LGG 54941324 + 54941304 54941344 41 AAAAGTGGGATTTTTTAAACCTCCAGCTGCAAAACCTTAAT AAAAGTGGGATTTTTTAAACCTCTAGCTGCAAAACCTTAAT < 41bp 0.729322007659741 0.503511622902048 0.6311675 0.16598353 prediction 0.451620769515385 Functional Loss - FAM210B ENSG00000124098 CDS Human protein_coding chr20:54941324 chr20:54941327 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_77824 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:54941312-54941345
64251 chr10 13687095 13687095 1 + G A rs116699415 13687092 + 13687072 13687112 41 CAGGTGTGTGTGTGCCCCAGCTCGACTCTCGGTGGTCTCCA CAGGTGTGTGTGTGCCCCAGCTCAACTCTCGGTGGTCTCCA < 41bp 0.767904067811313 0.54209834084576 0.13985279 0.18378243 prediction 0.451611453931107 Functional Loss - FRMD4A ENSG00000151474 UTR3 Human protein_coding chr10:13687092 chr10:13687095 . . 0 24 hm5C_associated_SNPs_77827 0 0 1 BUD13 POSTAR2 ENCODE chr10:13687023-13687114
64251 chr1 65613901 65613901 1 + C T rs114871912 65613899 + 65613879 65613919 41 GGCGCTCAGTCCGCCTGCTACTCGGTCCCGGCGCTGGGCTG GGCGCTCAGTCCGCCTGCTACTTGGTCCCGGCGCTGGGCTG < 41bp 0.780920933986056 0.555115489366765 0.61647075 0.5239607 prediction 0.451610889238581 Functional Loss - AK4 ENSG00000162433 UTR5 Human protein_coding chr1:65613899 chr1:65613901 . . 0 23 hm5C_associated_SNPs_77828 0 0 3 DDX3X POSTAR2 ENCODE chr1:65613877-65613924
64251 chr16 85111073 85111073 1 + C T LUSC 85111071 + 85111051 85111091 41 CCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTA CCGGAGTCCCGGGAGAAGCCCGTGGGCAGCATCGACTCCTA < 41bp 0.83111798334123 0.605325327496589 0.88230747 0.7090635 prediction 0.451585311689282 Functional Loss - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85111071 chr16:85111073 nonsynonymous SNV 0.013 0 23 hm5C_associated_SNPs_77835 0 0 2 BUD13 POSTAR2 ENCODE chr16:85111010-85111117
64251 chr10 74034805 74034805 1 + G A UCEC 74034802 + 74034782 74034822 41 CTGCGCCTGGACTCACGACTCTGGCCCAAGATCCAGGGGCT CTGCGCCTGGACTCACGACTCTGACCCAAGATCCAGGGGCT < 41bp 0.725787701740947 0.476097690194293 0.43770385 0.15563926 prediction 0.451575403481894 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034802 chr10:74034805 stopgain 1.000 1 24 hm5C_associated_SNPs_77837 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:74034743-74034873
64251 chr18 29126062 29126062 1 + G A COAD 29126059 + 29126039 29126079 41 CCAATGCAGAGAAAGTAACTCAGGAAATAGTCACTGAAAGA CCAATGCAGAGAAAGTAACTCAGAAAATAGTCACTGAAAGA < 41bp 0.741914639948554 0.516132093662897 0.83448994 0.26043433 prediction 0.451565092571313 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29126059 chr18:29126062 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_77840 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:29126039-29126074
64251 chr19 8551153 8551153 1 + G T LUAD 8551151 + 8551131 8551171 41 ATGGGCCTGGCCATGGGTGGCGGTGGCGGTGCCAGCTTTGA ATGGGCCTGGCCATGGGTGGCGTTGGCGGTGCCAGCTTTGA < 41bp 0.725782219586283 0.368849016808807 0.62108004 0.33573085 prediction 0.451564439172567 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551151 chr19:8551153 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_77841 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:8551123-8551153
64251 chr1 110009219 110009219 1 + G C rs569776837 110009218 + 110009198 110009238 41 ACAGAAGTTTGAATCCGAGTCGGGGGCTTTCTGCTGCCGGC ACAGAAGTTTGAATCCGAGTCCGGGGCTTTCTGCTGCCGGC < 41bp 0.838512279736764 0.612730097116429 0.9226321 0.9012141 prediction 0.45156436524067 Functional Loss - SYPL2 ENSG00000143028 UTR5 Human protein_coding chr1:110009218 chr1:110009219 . . 0 22 hm5C_associated_SNPs_77842 0 0 1 QKI POSTAR2 GSE21578,GSM545211 chr1:110009209-110009226
64251 chr4 2068725 2068725 1 + G A rs372704919 2068722 + 2068702 2068742 41 GCAGCTGAGGGCTGAAGCGCCTCGGGATGCCCCACACTGCC GCAGCTGAGGGCTGAAGCGCCTCAGGATGCCCCACACTGCC < 41bp 0.72891322708571 0.503133351253609 0.40090814 0.102772176 prediction 0.451559751664202 Functional Loss - NAT8L ENSG00000185818 UTR3 Human protein_coding chr4:2068722 chr4:2068725 . . 0 24 hm5C_associated_SNPs_77845 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr4:2068708-2068745
64251 chr6 7580718 7580718 1 + A C BLCA 7580717 + 7580697 7580737 41 GGGTGGAAGAAGACATCCAACAGCAAAAGGCCACTGGCTCT GGGTGGAAGAAGACATCCAACCGCAAAAGGCCACTGGCTCT < 41bp 0.725779490475573 0.478574746788358 0.21461925 0.19407493 prediction 0.451558980951146 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7580717 chr6:7580718 nonsynonymous SNV 0.949 3 22 hm5C_associated_SNPs_77846 0 0 1 AGGF1 POSTAR2 ENCODE chr6:7580662-7580754
64251 chr12 121435467 121435467 1 + C T HNSC 121435465 + 121435445 121435485 41 TGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCC TGGCTCAGCTGCAGAGCCCCCATGGTGAGCGCCCTGTGCCC < 41bp 0.806282326744261 0.580504324491346 0.5076823 0.4268349 prediction 0.451556004505831 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121435465 chr12:121435467 synonymous SNV 0.793 0 23 hm5C_associated_SNPs_77848 0 0 2 PRPF8 POSTAR2 ENCODE chr12:121435445-121435505
64251 chr18 46190853 46190853 1 + A C GBM 46190849 + 46190829 46190869 41 GGGACCTGCAGCCGGAAAAGCTGGACTTCACCCAGTTCCAC GGGACCTGCAGCCGGAAAAGCTGGCCTTCACCCAGTTCCAC < 41bp 0.72577263916824 0.338330062309584 0.39150852 0.2950138 prediction 0.451545278336479 Functional Loss - CTIF ENSG00000134030 CDS Human protein_coding chr18:46190849 chr18:46190853 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_77850 0 0 5 DDX24 POSTAR2 ENCODE chr18:46190817-46190874
64251 chr19 44680489 44680489 1 + G A rs2178342 44680486 + 44680466 44680506 41 AATGTTCATTGCAAGGTCCACACGGCAGAGAAACCTTATAA AATGTTCATTGCAAGGTCCACACAGCAGAGAAACCTTATAA < 41bp 0.742803416839428 0.517034886012341 0.032099873 0.011002898 prediction 0.451537061654173 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44680486 chr19:44680489 synonymous SNV . 0 24 hm5C_associated_SNPs_77851 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44680334-44680539
64251 chr20 61431539 61431539 1 + G A rs150726996 61431536 + 61431516 61431556 41 TCCTGTCACCCCCTCCGTGCCACGCACTGAAGGCCACCCCC TCCTGTCACCCCCTCCGTGCCACACACTGAAGGCCACCCCC < 41bp 0.758371395275234 0.53260432954705 0.1051105 0.05849588 prediction 0.451534131456369 Functional Loss - MRGBP ENSG00000101189 UTR3 Human protein_coding chr20:61431536 chr20:61431539 . . 0 24 hm5C_associated_SNPs_77852 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61431520-61431540
64251 chr4 106863545 106863545 1 + G A SKCM 106863542 + 106863522 106863562 41 TACCATTTTAAAGGGTGACACAGGAAATAATAATTGGATTC TACCATTTTAAAGGGTGACACAGAAAATAATAATTGGATTC < 41bp 0.756761324473159 0.530995282639082 0.8504599 0.33414996 prediction 0.451532083668154 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106863542 chr4:106863545 nonsynonymous SNV 0.794 3 24 hm5C_associated_SNPs_77853 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr4:106863540-106863560
64251 chr18 19209655 19209655 1 + C T rs192509712 19209653 + 19209633 19209673 41 AGTAGGGTACCGTCTGTTTACACGTCCAGTTAGGCTACAGT AGTAGGGTACCGTCTGTTTACATGTCCAGTTAGGCTACAGT < 41bp 0.736022034264848 0.510259280364319 0.113058865 0.12803942 prediction 0.45152550780106 Functional Loss - SNRPD1 ENSG00000167088 UTR3 Human protein_coding chr18:19209653 chr18:19209655 . . 0 23 hm5C_associated_SNPs_77856 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr18:19209567-19209679
64251 chr14 103193140 103193140 1 + C T rs542364643 103193138 + 103193118 103193158 41 CCGCCTCTCCCGCCGGAGCCCCCGAGCCCCACCAATGGCAG CCGCCTCTCCCGCCGGAGCCCCTGAGCCCCACCAATGGCAG < 41bp 0.725762043987193 0.477085174213046 0.30681968 0.27352238 prediction 0.451524087974386 Functional Loss - RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103193138 chr14:103193140 . . 0 23 hm5C_associated_SNPs_77859 0 0 2 IGF2BP2 POSTAR2 ENCODE chr14:103193107-103193153
64251 chr7 43635616 43635616 1 + A C UCEC 43635612 + 43635592 43635632 41 ATTGTCGGATGGAAATAATTCATGAGATTGCTGTACTTGAA ATTGTCGGATGGAAATAATTCATGCGATTGCTGTACTTGAA < 41bp 0.72576180805262 0.319177913422513 0.25692743 0.24112019 prediction 0.451523616105239 Functional Loss - STK17A ENSG00000164543 CDS Human protein_coding chr7:43635612 chr7:43635616 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_77860 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:43635612-43635634
64251 chr9 124091220 124091220 1 + G A UCEC 124091217 + 124091197 124091237 41 GGCTGCCTACCGCACATCCCCACGGCTGAAGGACAAGAAGA GGCTGCCTACCGCACATCCCCACAGCTGAAGGACAAGAAGA < 41bp 0.725759576981924 0.492664429572073 0.2910417 0.1159077 prediction 0.451519153963847 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124091217 chr9:124091220 nonsynonymous SNV 0.926 3 24 hm5C_associated_SNPs_77862 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:124091200-124091220
64251 chr9 108097935 108097935 1 + G A UCEC 108097932 + 108097912 108097952 41 GTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGT GTGTAGCAGCGTGTCCAAGGCAAAAACTGAAAACTCTGAGT < 41bp 0.72575902254514 0.494043719037124 0.16832346 0.10313338 prediction 0.45151804509028 Functional Loss - SLC44A1 ENSG00000070214 CDS Human protein_coding chr9:108097932 chr9:108097935 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_77863 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:108097920-108097940
64251 chr3 41266471 41266471 1 + C T HNSC 41266469 + 41266449 41266489 41 TGATGGACAGTATGCAATGACTCGAGCTCAGAGGGTACGAG TGATGGACAGTATGCAATGACTTGAGCTCAGAGGGTACGAG < 41bp 0.863804742914483 0.638051117607947 0.034319848 0.016628504 prediction 0.451507250613072 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266469 chr3:41266471 stopgain 0.994 1 23 hm5C_associated_SNPs_77865 0 0 21 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:41266440-41266500
64251 chr6 7405157 7405157 1 + C T GBM 7405155 + 7405135 7405175 41 TGTCTCTGGCCCATAGGTACCACGGTGGAGGCGTGTATATC TGTCTCTGGCCCATAGGTACCATGGTGGAGGCGTGTATATC < 41bp 0.830395401790082 0.604642451387907 0.18602109 0.2545421 prediction 0.451505900804351 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7405155 chr6:7405157 synonymous SNV . 0 23 hm5C_associated_SNPs_77866 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:7405140-7405160
64251 chr8 42179965 42179965 1 + C T UCEC 42179962 + 42179942 42179982 41 ATGAGAAGACTGTTGTCCGGCTGCAGGAGAAGCGGCAGAAG ATGAGAAGACTGTTGTCCGGCTGTAGGAGAAGCGGCAGAAG < 41bp 0.732656247705787 0.506904949805065 0.60176104 0.3949617 prediction 0.451502595801444 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42179962 chr8:42179965 stopgain 0.995 1 24 hm5C_associated_SNPs_77869 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr8:42179925-42179980
64251 chr1 220307791 220307791 1 + G C LUSC 220307790 + 220307770 220307810 41 TTGGAAGGAAAAGACCAGCTCGGGGGTTGGTTTCAGTCATC TTGGAAGGAAAAGACCAGCTCCGGGGTTGGTTTCAGTCATC < 41bp 0.877611745584235 0.651860900361818 0.92321396 0.89012945 prediction 0.451501690444835 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220307790 chr1:220307791 nonsynonymous SNV 0.984 3 22 hm5C_associated_SNPs_77870 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr1:220307758-220307791
64251 chr14 77795519 77795519 1 + G T LGG 77795517 + 77795497 77795537 41 AGATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGC AGATGCAGCTGACCTGGGCCCATAACGCCATCACTTGTGGC < 41bp 0.72574646389254 0.365418157842856 0.35121137 0.40726382 prediction 0.451492927785081 Functional Loss - GSTZ1 ENSG00000100577 CDS Human protein_coding chr14:77795517 chr14:77795519 nonsynonymous SNV 0.763 1 23 hm5C_associated_SNPs_77874 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:77795493-77795519
64251 chr1 36306800 36306800 1 + G T STAD 36306797 + 36306777 36306817 41 TCCAGCAGCCTGTCATCTTCCTGGGAGCGGATGTCACACAC TCCAGCAGCCTGTCATCTTCCTGTGAGCGGATGTCACACAC < 41bp 0.92470180253668 0.698955549820288 0.7532151 0.07794288 prediction 0.451492505432784 Functional Loss - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36306797 chr1:36306800 stopgain 0.997 1 24 hm5C_associated_SNPs_77875 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36306768-36306806
64251 chr9 133760409 133760409 1 + G T LUAD 133760406 + 133760386 133760426 41 AGCAGCCTCTGCAGGGAAGGCTGGAGGAAAGCCCTCGCAGA AGCAGCCTCTGCAGGGAAGGCTGTAGGAAAGCCCTCGCAGA < 41bp 0.927626851141255 0.701881500190146 0.6183205 0.28776044 prediction 0.451490701902219 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133760406 chr9:133760409 nonsynonymous SNV 0.185 2 24 hm5C_associated_SNPs_77877 0 0 1 SUB1 POSTAR2 ENCODE chr9:133760401-133760432
64251 chr3 10183798 10183798 1 + C T BLCA 10183796 + 10183776 10183816 41 GCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCG GCGTCGTGCTGCCCGTATGGCTTAACTTCGACGGCGAGCCG < 41bp 0.805746337136419 0.580010226737856 0.105397075 0.099707276 prediction 0.451472220797127 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10183796 chr3:10183798 synonymous SNV . 0 23 hm5C_associated_SNPs_77880 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:10183720-10183808
64251 chr19 608089 608089 1 + G A LUSC 608086 + 608066 608106 41 ATCTGGCTGACCATGCTCAGCATGATTGTGGGTGCCACCTG ATCTGGCTGACCATGCTCAGCATAATTGTGGGTGCCACCTG < 41bp 0.725734835840044 0.484835085169913 0.3923172 0.40006846 prediction 0.451469671680087 Functional Loss - HCN2 ENSG00000099822 CDS Human protein_coding chr19:608086 chr19:608089 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_77881 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:608074-608099
64251 chr12 120106173 120106173 1 + G A BLCA 120106170 + 120106150 120106190 41 CCAAGATCCTGATGGACAGCCCCGAAGACGCCGACCTCTTC CCAAGATCCTGATGGACAGCCCCAAAGACGCCGACCTCTTC < 41bp 0.7257285105134 0.492837847706192 0.17990267 0.11692017 prediction 0.451457021026801 Functional Loss - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120106170 chr12:120106173 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_77882 0 0 1 PRPF8 POSTAR2 ENCODE chr12:120106173-120106271
64251 chr4 155491688 155491688 1 + G A UCEC 155491685 + 155491665 155491705 41 TACTGGGGTGGACAGTACACCTGGGACATGGCAAAGCATGG TACTGGGGTGGACAGTACACCTGAGACATGGCAAAGCATGG < 41bp 0.725727496475855 0.495205976733527 0.71959656 0.36757487 prediction 0.45145499295171 Functional Loss - FGB ENSG00000171564 CDS Human protein_coding chr4:155491685 chr4:155491688 stopgain 0.966 1 24 hm5C_associated_SNPs_77883 0 0 4 LARP4 POSTAR2 ENCODE chr4:155491663-155491706
64251 chr17 79205419 79205419 1 - G A rs151331201 79205421 - 79205401 79205441 41 GGACTGTGACTCGGGGACCACGCGCCTTCCTGAGCCGCGAG GGACTGTGACTCGGGGACCACGTGCCTTCCTGAGCCGCGAG < 41bp 0.725725043366839 0.45241477924345 0.59879065 0.79463017 prediction 0.451450086733678 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205421 chr17:79205419 synonymous SNV . 0 23 hm5C_associated_SNPs_77885 0 0 3 BUD13 POSTAR2 ENCODE chr17:79205359-79205434
64251 chr17 79205418 79205418 1 - C T UCEC 79205421 - 79205401 79205441 41 GGACTGTGACTCGGGGACCACGCGCCTTCCTGAGCCGCGAG GGACTGTGACTCGGGGACCACGCACCTTCCTGAGCCGCGAG < 41bp 0.725725043366839 0.472817923323294 0.59879065 0.27714264 prediction 0.451450086733678 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205421 chr17:79205418 nonsynonymous SNV 0.083 0 24 hm5C_associated_SNPs_77886 0 0 3 BUD13 POSTAR2 ENCODE chr17:79205359-79205434
64251 chr12 121003284 121003284 1 + C T LUAD 121003281 + 121003261 121003301 41 AAAAGAAGGCTCGGGAGGAACGCCGCCGAGAGCGCAGGATT AAAAGAAGGCTCGGGAGGAACGCTGCCGAGAGCGCAGGATT < 41bp 0.732192506660337 0.506483707655394 0.24988729 0.124720454 prediction 0.451417598009884 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121003281 chr12:121003284 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_77892 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:121003263-121003302
64251 chr19 17450401 17450401 1 + C T BRCA 17450399 + 17450379 17450419 41 GCAGGAGGGCGTGCGGCGCGCCCGGGAGAGGTGGGCGGACA GCAGGAGGGCGTGCGGCGCGCCTGGGAGAGGTGGGCGGACA < 41bp 0.760281720658346 0.534576977559117 0.35805368 0.33592576 prediction 0.451409486198458 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17450399 chr19:17450401 nonsynonymous SNV 0.047 1 23 hm5C_associated_SNPs_77893 0 0 4 GTF2F1 POSTAR2 ENCODE chr19:17450332-17450449
64251 chr11 117117621 117117621 1 + G A READ 117117618 + 117117598 117117638 41 AGGAGTTTTTGCAGAAGGAGCAGGATCTGAAAGCTGAAATT AGGAGTTTTTGCAGAAGGAGCAGAATCTGAAAGCTGAAATT < 41bp 0.725697383072368 0.489209001774603 0.7157259 0.48654184 prediction 0.451394766144736 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117117618 chr11:117117621 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_77896 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:117117591-117117627
64251 chr6 25726475 25726475 1 - A G BRCA 25726476 - 25726456 25726496 41 CGATCCGCAATGATGAGGAACTCAATAAGCTTTTGGGCGGC CGATCCGCAATGATGAGGAACCCAATAAGCTTTTGGGCGGC < 41bp 0.725697340645657 0.486933060309252 0.84606963 0.28212005 prediction 0.451394681291314 Functional Loss - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726476 chr6:25726475 nonsynonymous SNV 0.032 4 22 hm5C_associated_SNPs_77897 0 0 1 SLBP POSTAR2 ENCODE chr6:25726465-25726497
64251 chr7 29603946 29603946 1 + G C rs190568006 29603945 + 29603925 29603965 41 GCGCGCCCCCTTCGTGCTCTCGGCCGCGTTCACCGCGCGAG GCGCGCCCCCTTCGTGCTCTCCGCCGCGTTCACCGCGCGAG < 41bp 0.725697093885465 0.464130735044298 0.896976 0.35780597 prediction 0.45139418777093 Functional Loss - PRR15 ENSG00000176532 UTR5 Human protein_coding chr7:29603945 chr7:29603946 . . 0 22 hm5C_associated_SNPs_77898 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:29603925-29603950
64251 chr8 145730809 145730809 1 + G T rs141187317 145730806 + 145730786 145730826 41 TGGCCGAGCTTCACCGTGCACTGGGCCAGGCGCGTGACCAC TGGCCGAGCTTCACCGTGCACTGTGCCAGGCGCGTGACCAC < 41bp 0.93062245047282 0.704927238280275 0.59202075 0.18323037 prediction 0.451390424385091 Functional Loss - GPT ENSG00000167701 CDS Human protein_coding chr8:145730806 chr8:145730809 nonsynonymous SNV 0.012 1 24 hm5C_associated_SNPs_77899 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145730744-145730814
64251 chr17 4837070 4837070 1 - C T rs147455264 4837073 - 4837053 4837093 41 GTTTGGGGCGGGCTCCGGGACGGGCTCTGAGGTGGTCGGGC GTTTGGGGCGGGCTCCGGGACGGACTCTGAGGTGGTCGGGC < 41bp 0.797370267546772 0.57167745032236 0.8493011 0.5589619 prediction 0.451385634448825 Functional Loss - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837073 chr17:4837070 nonsynonymous SNV 0.058 0 24 hm5C_associated_SNPs_77903 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr17:4837066-4837092
64251 chrX 118123421 118123421 1 + G T STAD 118123418 + 118123398 118123438 41 AGTCAGGAGGAAGCAGCAGCCAGGGGAGATGGCAGCAGTCT AGTCAGGAGGAAGCAGCAGCCAGTGGAGATGGCAGCAGTCT < 41bp 0.931648000792262 0.705959684604884 0.8948787 0.46023732 prediction 0.451376632374755 Functional Loss - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118123418 chrX:118123421 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_77904 0 0 2 BUD13 POSTAR2 ENCODE chrX:118123310-118123427
64251 chr1 41204589 41204589 1 + G T UCEC 41204586 + 41204566 41204606 41 AAGCCTACAGTCGTTCTGGCCTCGGGTCATGGAAGAAATCC AAGCCTACAGTCGTTCTGGCCTCTGGTCATGGAAGAAATCC < 41bp 0.725672861264529 0.345418304531757 0.08696276 0.049550414 prediction 0.451345722529058 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41204586 chr1:41204589 nonsynonymous SNV 0.987 3 24 hm5C_associated_SNPs_77915 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:41204578-41204600
64251 chr16 8866730 8866730 1 + G A STAD 8866727 + 8866707 8866747 41 AGTCCGAGGGTGGAGACAACCACGCATCCGATGACTTCTTT AGTCCGAGGGTGGAGACAACCACACATCCGATGACTTCTTT < 41bp 0.761635586371493 0.535962741396608 0.20202586 0.10078341 prediction 0.45134568994977 Functional Loss - ABAT ENSG00000183044 CDS Human protein_coding chr16:8866727 chr16:8866730 nonsynonymous SNV 0.105 4 24 hm5C_associated_SNPs_77916 0 0 4 BUD13 POSTAR2 ENCODE chr16:8866720-8866865
64251 chr3 50683688 50683688 1 + T C UCEC 50683687 + 50683667 50683707 41 TCCTGAGTGGTCAGAAGTCTCTGAGGATGGTGAGTGAACCT TCCTGAGTGGTCAGAAGTCTCCGAGGATGGTGAGTGAACCT < 41bp 0.776619737499327 0.550952791699824 0.358715 0.82185185 prediction 0.451333891599006 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683687 chr3:50683688 synonymous SNV . 0 22 hm5C_associated_SNPs_77919 0 0 1 PPIG POSTAR2 ENCODE chr3:50683633-50683712
64251 chr6 33383799 33383799 1 + G T UCEC 33383797 + 33383777 33383817 41 CTGTCCCGAGGGGACCCTGTCCGGGTCCTTGCTCGGAGAGT CTGTCCCGAGGGGACCCTGTCCTGGTCCTTGCTCGGAGAGT < 41bp 0.72566097858881 0.375422221496007 0.9315232 0.19540977 prediction 0.451321957177619 Functional Loss - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383797 chr6:33383799 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_77922 0 0 5 HNRNPK POSTAR2 ENCODE chr6:33383738-33383817
64251 chr13 113536260 113536260 1 + C T COAD 113536258 + 113536238 113536278 41 CACTCTCAGCAGGTGACACTCGCGGCCTGGAAGGAGAAGGT CACTCTCAGCAGGTGACACTCGTGGCCTGGAAGGAGAAGGT < 41bp 0.74643772037969 0.520777959288702 0.8926505 0.9297309 prediction 0.451319522181975 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536258 chr13:113536260 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_77923 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:113536233-113536266
64251 chr1 46073549 46073549 1 + A C STAD 46073545 + 46073525 46073565 41 AGAGGAGAAGGTAGTTACCTCTGAAAACGAGGCAGGAAAGG AGAGGAGAAGGTAGTTACCTCTGACAACGAGGCAGGAAAGG < 41bp 0.725656292722457 0.316430623619915 0.20613682 0.17347738 prediction 0.451312585444914 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073545 chr1:46073549 nonsynonymous SNV 0.269 1 25 hm5C_associated_SNPs_77925 0 0 14 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:46073532-46073553
64251 chr1 155039354 155039354 1 + G T LIHC 155039351 + 155039331 155039371 41 GGCCAGGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCC GGCCAGGCTATGAGTCCTGCCAGTCAGAGGGCCCCCGGGCC < 41bp 0.725656103761491 0.313295015784908 0.5307887 0.16576293 prediction 0.451312207522982 Functional Loss - EFNA4 ENSG00000243364 CDS Human protein_coding chr1:155039351 chr1:155039354 nonsynonymous SNV 0.445 1 24 hm5C_associated_SNPs_77926 0 0 1 SND1 POSTAR2 ENCODE chr1:155039314-155039394
64251 chr6 30529704 30529704 1 + G C SKCM 30529700 + 30529680 30529720 41 CTTGGGGTAGAGGCCCAATTCGGAGAGGGCTTGGCCCCAGG CTTGGGGTAGAGGCCCAATTCGGACAGGGCTTGGCCCCAGG < 41bp 0.820204660049276 0.594551943556568 0.9030012 0.32803392 prediction 0.451305432985415 Functional Loss - PRR3 ENSG00000204576 CDS Human protein_coding chr6:30529700 chr6:30529704 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_77930 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr6:30529692-30529725
64251 chr15 89174540 89174540 1 + C T rs73465626 89174538 + 89174518 89174558 41 CCTGAACCTGGTCTGGTGCCCCCGAACCTGGTCTGATGCCC CCTGAACCTGGTCTGGTGCCCCTGAACCTGGTCTGATGCCC < 41bp 0.725652703498569 0.49494721024839 0.17599067 0.21665692 prediction 0.451305406997138 Functional Loss - AEN ENSG00000181026 UTR3 Human protein_coding chr15:89174538 chr15:89174540 . . 0 23 hm5C_associated_SNPs_77931 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:89174338-89174616
64251 chr9 71866253 71866253 1 + G T LUSC 71866251 + 71866231 71866271 41 AGGCCAGGTTACAGAGAATGCAGGAGCTCCAGGAAGCACAG AGGCCAGGTTACAGAGAATGCATGAGCTCCAGGAAGCACAG < 41bp 0.725652292822632 0.385764401747628 0.8826233 0.19968098 prediction 0.451304585645264 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71866251 chr9:71866253 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_77932 0 0 2 UCHL5 POSTAR2 ENCODE chr9:71866223-71866279
64251 chr11 65048558 65048558 1 + G A KICH 65048555 + 65048535 65048575 41 GAGGGAGACCGGGAACATTCCTCGGGTGCTCAAATTCCAGT GAGGGAGACCGGGAACATTCCTCAGGTGCTCAAATTCCAGT < 41bp 0.769811146391804 0.544161423691621 0.4041891 0.07087445 prediction 0.451299445400367 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048555 chr11:65048558 synonymous SNV . 0 24 hm5C_associated_SNPs_77934 0 0 2 GRWD1 POSTAR2 ENCODE chr11:65048522-65048597
64251 chr4 84516068 84516068 1 + G T LUAD 84516066 + 84516046 84516086 41 GTCAAGGCTTGTCCTCATGTCTGGTTTGAACGCTCAGAAAT GTCAAGGCTTGTCCTCATGTCTTGTTTGAACGCTCAGAAAT < 41bp 0.725649710901902 0.385806765602321 0.19287625 0.078572005 prediction 0.451299421803804 Functional Loss - GPAT3 ENSG00000138678 CDS Human protein_coding chr4:84516066 chr4:84516068 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_77935 0 0 1 SND1 POSTAR2 ENCODE chr4:84515997-84516071
64251 chr5 149216176 149216176 1 + G A SKCM 149216173 + 149216153 149216193 41 GGGAGCCGTCTGGGGTTCACCTTGAGGACTGGCCCCAGCAG GGGAGCCGTCTGGGGTTCACCTTAAGGACTGGCCCCAGCAG < 41bp 0.788562214253533 0.562915668608907 0.77979803 0.77527577 prediction 0.451293091289253 Functional Loss - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149216173 chr5:149216176 nonsynonymous SNV 0.221 0 24 hm5C_associated_SNPs_77937 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:149216142-149216178
64251 chr9 136218179 136218179 1 + C T STAD 136218177 + 136218157 136218197 41 CTGTGGCTCGTATCGCCAAGCTCGAAAAGGCAAAGGCTAAA CTGTGGCTCGTATCGCCAAGCTTGAAAAGGCAAAGGCTAAA < 41bp 0.854447559300348 0.628803104110302 0.04048887 0.039912462 prediction 0.451288910380091 Functional Loss - RPL7A ENSG00000148303 CDS Human protein_coding chr9:136218177 chr9:136218179 synonymous SNV . 0 23 hm5C_associated_SNPs_77940 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136218126-136218182
64251 chr19 34302357 34302357 1 + G A BLCA 34302354 + 34302334 34302374 41 CGAGGAGGTCTTCCCCGAGACCGGAGACGTCATGTGCAACT CGAGGAGGTCTTCCCCGAGACCGAAGACGTCATGTGCAACT < 41bp 0.770069407341519 0.544427076659223 0.44686025 0.04407975 prediction 0.451284661364593 Functional Loss - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302354 chr19:34302357 nonsynonymous SNV 0.922 3 24 hm5C_associated_SNPs_77941 0 0 1 PPIG POSTAR2 ENCODE chr19:34302319-34302380
64251 chr13 113536149 113536149 1 + G A LUAD 113536146 + 113536126 113536166 41 GCAGAATGGGTGCGCACAGCCTCGGGACCGCGACTCAGAAT GCAGAATGGGTGCGCACAGCCTCAGGACCGCGACTCAGAAT < 41bp 0.725641963301675 0.48440654394244 0.057120085 0.04350531 prediction 0.451283926603351 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536146 chr13:113536149 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_77942 0 0 4 SF3A3 POSTAR2 ENCODE chr13:113536074-113536193
64251 chr1 109777924 109777924 1 + C T SKCM 109777922 + 109777902 109777942 41 AGCAGCCCATTGCTGCCCTGCACCGGGATGAGTGGCTCCGG AGCAGCCCATTGCTGCCCTGCATCGGGATGAGTGGCTCCGG < 41bp 0.725634754312178 0.471945279847387 0.17526188 0.20003814 prediction 0.451269508624357 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109777922 chr1:109777924 synonymous SNV . 0 23 hm5C_associated_SNPs_77949 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr5 1222921 1222921 1 + G A rs550316572 1222918 + 1222898 1222938 41 GTGTTTGTCCTTGCCACAGTCACGGGGTGCATGTGCAGAGG GTGTTTGTCCTTGCCACAGTCACAGGGTGCATGTGCAGAGG < 41bp 0.762586749618737 0.536958321643879 0.40060508 0.22664183 prediction 0.451256855949716 Functional Loss - SLC6A19 ENSG00000174358 UTR3 Human protein_coding chr5:1222918 chr5:1222921 . . 0 24 hm5C_associated_SNPs_77954 0 0 1 EIF4G2 POSTAR2 ENCODE chr5:1222897-1222985
64251 chr17 73096184 73096184 1 + G T LUAD 73096181 + 73096161 73096201 41 CGCCGGCGGGTGCTGGCCAACGCGCTGGCCTCGATGGGCGT CGCCGGCGGGTGCTGGCCAACGCTCTGGCCTCGATGGGCGT < 41bp 0.725626950227685 0.32696688772917 0.28071976 0.06450227 prediction 0.45125390045537 Functional Loss - SLC16A5 ENSG00000170190 CDS Human protein_coding chr17:73096181 chr17:73096184 synonymous SNV . 0 24 hm5C_associated_SNPs_77956 0 0 2 RBM15 POSTAR2 ENCODE chr17:73096152-73096208
64251 chr5 134223521 134223521 1 + G C LUAD 134223520 + 134223500 134223540 41 GGCAGCAGAAGAGGCCAATGCGGTGCTGGGGCTGGACACCC GGCAGCAGAAGAGGCCAATGCCGTGCTGGGGCTGGACACCC < 41bp 0.877473398576752 0.651846953438577 0.8167691 0.5082235 prediction 0.45125289027635 Functional Loss - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134223520 chr5:134223521 synonymous SNV . 0 22 hm5C_associated_SNPs_77957 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:134223502-134223541
64251 chr11 66272178 66272178 1 + C T BLCA 66272176 + 66272156 66272196 41 CCCCCGAGTGCTTCCTCACCCTCAGGGACACGGTGCTGCTG CCCCCGAGTGCTTCCTCACCCTTAGGGACACGGTGCTGCTG < 41bp 0.725609969013064 0.446595123619907 0.016722202 0.02637893 prediction 0.451219938026127 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66272176 chr11:66272178 synonymous SNV . 0 23 hm5C_associated_SNPs_77960 0 0 1 SND1 POSTAR2 ENCODE chr11:66272105-66272197
64251 chr12 121855361 121855361 1 + G T COAD 121855358 + 121855338 121855378 41 GCTCCGTTTGTTCAGTCTTACAAGAAAATCTCCGTAGATGT GCTCCGTTTGTTCAGTCTTACAATAAAATCTCCGTAGATGT < 41bp 0.725606052871231 0.341037796386776 0.33168378 0.19758648 prediction 0.451212105742463 Functional Loss - RNF34 ENSG00000170633 CDS Human protein_coding chr12:121855358 chr12:121855361 stopgain 1.000 1 24 hm5C_associated_SNPs_77963 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr12:121855347-121855371
64251 chr9 4860569 4860569 1 + G A rs1260073 4860566 + 4860546 4860586 41 AGTCGTGCTGCTAGAACAGTCTCGTAGCTGCAGTTCAGCTG AGTCGTGCTGCTAGAACAGTCTCATAGCTGCAGTTCAGCTG < 41bp 0.761462263281201 0.535856584459693 0.15387443 0.12493491 prediction 0.451211357643017 Functional Loss - RCL1 ENSG00000120158 UTR3 Human protein_coding chr9:4860566 chr9:4860569 . . 0 24 hm5C_associated_SNPs_77964 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:4860545-4860576
64251 chr8 133816130 133816130 1 + C T CHOL 133816128 + 133816108 133816148 41 GAACAAAACAGGGAGTAAACCTCGAACCAGCGCTAACAGCA GAACAAAACAGGGAGTAAACCTTGAACCAGCGCTAACAGCA < 41bp 0.869278057630284 0.643677951109308 0.90057874 0.50203294 prediction 0.451200213041951 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133816128 chr8:133816130 stopgain 0.996 1 23 hm5C_associated_SNPs_77968 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:133816111-133816147
64251 chr1 207818519 207818519 1 + G A rs569066729 207818516 + 207818496 207818536 41 ACTCAGAAGGGACTTCCCTGCTCGGCTGGCTTTCGGTTTCT ACTCAGAAGGGACTTCCCTGCTCAGCTGGCTTTCGGTTTCT < 41bp 0.730347768418664 0.504760811710005 0.3443547 0.22161812 prediction 0.451173913417319 Functional Loss - CR1L ENSG00000197721 UTR5 Human protein_coding chr1:207818516 chr1:207818519 . . 0 24 hm5C_associated_SNPs_77975 0 0 3 GEMIN5 POSTAR2 ENCODE chr1:207818493-207818520
64251 chr10 95931002 95931002 1 + A T LUAD 95930998 + 95930978 95931018 41 CCTTCAAGTTCAGCTGGGATCAGCAAGGAGCTGATCGATCT CCTTCAAGTTCAGCTGGGATCAGCTAGGAGCTGATCGATCT < 41bp 0.725585910842998 0.403073060895737 0.48072448 0.181714 prediction 0.451171821685996 Functional Loss - PLCE1 ENSG00000138193 CDS Human protein_coding chr10:95930998 chr10:95931002 stopgain 0.995 1 25 hm5C_associated_SNPs_77976 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:95931001-95931028
64251 chr18 9535999 9535999 1 + G A rs150889840 9535996 + 9535976 9536016 41 ACCCGTGCATCTTACTGTAACCCGGGGGCCAGGCCGGCTCT ACCCGTGCATCTTACTGTAACCCAGGGGCCAGGCCGGCTCT < 41bp 0.787880007405091 0.562295016838372 0.40180457 0.03774014 prediction 0.451169981133438 Functional Loss - RALBP1 ENSG00000017797 UTR3 Human protein_coding chr18:9535996 chr18:9535999 . . 0 24 hm5C_associated_SNPs_77977 0 0 3 FXR2 POSTAR2 ENCODE chr18:9535990-9536030
64251 chr3 196613120 196613120 1 + G A GBM 196613117 + 196613097 196613137 41 AATGGCAGTGCCACAAACGCCTGGGACCAGTCATCCTGTTC AATGGCAGTGCCACAAACGCCTGAGACCAGTCATCCTGTTC < 41bp 0.725584726408209 0.487564562339527 0.21718329 0.12894148 prediction 0.451169452816417 Functional Loss - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196613117 chr3:196613120 stopgain 0.931 0 24 hm5C_associated_SNPs_77979 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr3:196613079-196613135
64251 chr10 28971145 28971145 1 + G A UCEC 28971142 + 28971122 28971162 41 CCCGTTTGCACTACAGCTTTCACGGACACCATTCCAAAAAG CCCGTTTGCACTACAGCTTTCACAGACACCATTCCAAAAAG < 41bp 0.725581271785479 0.488135363277168 0.203771 0.10940775 prediction 0.451162543570957 Functional Loss - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28971142 chr10:28971145 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_77980 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr10:28971129-28971161
64251 chr19 11350955 11350955 1 + G T UCEC 11350952 + 11350932 11350972 41 CCTGGCTGGGCCCTGCCTACCGAGAATTTGAGGTCTTAAAG CCTGGCTGGGCCCTGCCTACCGATAATTTGAGGTCTTAAAG < 41bp 0.927524130643128 0.701951791095406 0.8827387 0.4675151 prediction 0.451144679095443 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350952 chr19:11350955 stopgain 0.402 0 24 hm5C_associated_SNPs_77982 0 0 3 BUD13 POSTAR2 ENCODE chr19:11350955-11351019
64251 chrX 102004415 102004415 1 + G C LUAD 102004411 + 102004391 102004431 41 GGCCGATTGCAAACCTAGGTCAGGGGCTGAGGAGGAGGAGG GGCCGATTGCAAACCTAGGTCAGGCGCTGAGGAGGAGGAGG < 41bp 0.860401809915216 0.634832583841411 0.90124243 0.79150045 prediction 0.45113845214761 Functional Loss - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102004411 chrX:102004415 synonymous SNV . 0 25 hm5C_associated_SNPs_77985 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:102004400-102004420
64251 chr5 149901304 149901304 1 + G T SARC 149901302 + 149901282 149901322 41 GACAAGTACTGTGTGGCCTACGGCGTGGGCATCATTGGCTT GACAAGTACTGTGTGGCCTACGTCGTGGGCATCATTGGCTT < 41bp 0.725567651464953 0.373794493708252 0.5217494 0.2642324 prediction 0.451135302929905 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149901302 chr5:149901304 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_77986 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:149901276-149901314
64251 chr22 18640453 18640453 1 + T C CESC 18640452 + 18640432 18640472 41 TGAGCAAGGCGTTTGGGCTCCTGAGGCAAATCTGTCAGTCC TGAGCAAGGCGTTTGGGCTCCCGAGGCAAATCTGTCAGTCC < 41bp 0.730544294406717 0.504977636690377 0.7021725 0.66341686 prediction 0.45113331543268 Functional Loss - USP18 ENSG00000184979 CDS Human protein_coding chr22:18640452 chr22:18640453 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_77988 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:18640441-18640461
64251 chr17 54912249 54912249 1 + G T LUAD 54912247 + 54912227 54912267 41 TGTGGACGCTGTGCTCGGTCCTGCTGCCGGTGTTCATCACC TGTGGACGCTGTGCTCGGTCCTTCTGCCGGTGTTCATCACC < 41bp 0.725564581750326 0.383248481432819 0.24183723 0.08436671 prediction 0.451129163500652 Functional Loss - DGKE ENSG00000153933 CDS Human protein_coding chr17:54912247 chr17:54912249 synonymous SNV . 0 23 hm5C_associated_SNPs_77990 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:54912234-54912263
64251 chr9 130870088 130870088 1 + G A rs188541776 130870085 + 130870065 130870105 41 CCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTC CCTTGCAGCCAGCTGTTGGCCACAGCCCCTGCCCTCTGGTC < 41bp 0.793159706081655 0.567600676009908 0.13789448 0.08314395 prediction 0.451118060143495 Functional Loss - SLC25A25 ENSG00000148339 UTR3 Human protein_coding chr9:130870085 chr9:130870088 . . 0 24 hm5C_associated_SNPs_77995 0 0 5 FXR2 POSTAR2 ENCODE chr9:130870083-130870117
64251 chr12 118577338 118577338 1 + G T LUAD 118577336 + 118577316 118577356 41 CCTCTCCGATTATGTGGGCTCGGGGCCTCCCAAGGGCACAG CCTCTCCGATTATGTGGGCTCGTGGCCTCCCAAGGGCACAG < 41bp 0.911996042932852 0.686437248392799 0.8840403 0.20455194 prediction 0.451117589080106 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118577336 chr12:118577338 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_77996 0 0 6 FMR1 POSTAR2 ENCODE chr12:118577325-118577357
64251 chr10 134015485 134015485 1 + G A rs3736257 134015482 + 134015462 134015502 41 ATGGACGAGAATGAGTTCGTCGCGGTGACCAGTACAAATGC ATGGACGAGAATGAGTTCGTCGCAGTGACCAGTACAAATGC < 41bp 0.784169540738537 0.558613817869571 0.5204026 0.39442277 prediction 0.451111445737932 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134015482 chr10:134015485 synonymous SNV . 0 24 hm5C_associated_SNPs_77998 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:134015461-134015509
64251 chr19 24270126 24270126 1 + G A BRCA 24270123 + 24270103 24270143 41 AGCTAAGATGCCAGGACCCCCTAGAAGCCTAGAAATGGTGA AGCTAAGATGCCAGGACCCCCTAAAAGCCTAGAAATGGTGA < 41bp 0.735738048466012 0.510184747021615 0.27325535 0.087411225 prediction 0.451106602888794 Functional Loss - ZNF254 ENSG00000213096 CDS Human protein_coding chr19:24270123 chr19:24270126 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_78000 0 0 1 DDX3X POSTAR2 ENCODE chr19:24270019-24270126
64251 chr12 53676087 53676087 1 + G A COAD 53676084 + 53676064 53676104 41 CTCTGCTGCTGTCTGTGCTTCGGGATCCTGCCCTCCAGAAG CTCTGCTGCTGTCTGTGCTTCGGAATCCTGCCCTCCAGAAG < 41bp 0.816256868613368 0.590705501883616 0.9130132 0.5885916 prediction 0.451102733459505 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53676084 chr12:53676087 nonsynonymous SNV 0.942 0 24 hm5C_associated_SNPs_78002 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr12:53676054-53676099
64251 chr10 82185704 82185704 1 + G T UCEC 82185702 + 82185682 82185722 41 GCAGTGGTAAAGGAGCACATCAGGACTGAAGTGAAGGATTT GCAGTGGTAAAGGAGCACATCATGACTGAAGTGAAGGATTT < 41bp 0.89761386136976 0.672069202915468 0.37590364 0.07903007 prediction 0.451089316908583 Functional Loss - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82185702 chr10:82185704 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_78006 0 0 5 GRWD1 POSTAR2 ENCODE chr10:82185647-82185741
64251 chr4 30723326 30723326 1 + G A GBM 30723323 + 30723303 30723343 41 AGCGAGCGGCGCATCGACCGCGAGAAGCTGCCCCAGTGTCA AGCGAGCGGCGCATCGACCGCGAAAAGCTGCCCCAGTGTCA < 41bp 0.72554154790303 0.481716407854493 0.87500715 0.53050864 prediction 0.451083095806059 Functional Loss - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30723323 chr4:30723326 synonymous SNV . 0 24 hm5C_associated_SNPs_78009 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:30723319-30723380
64251 chr1 229772285 229772285 1 + C T rs115230066 229772283 + 229772263 229772303 41 ATAGGTGTTGCTCTGGAGATCTCGAACCTCCCTTCGTTGCT ATAGGTGTTGCTCTGGAGATCTTGAACCTCCCTTCGTTGCT < 41bp 0.725540650631105 0.450119413755036 0.91898596 0.2934117 prediction 0.451081301262211 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772283 chr1:229772285 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_78011 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:229772148-229772311
64251 chr1 226033083 226033083 1 + A C rs4653695 226033082 + 226033062 226033102 41 CCCCGCCTGCCACCTCCCCCCACAAGTGCCCTCCAGGCTTT CCCCGCCTGCCACCTCCCCCCCCAAGTGCCCTCCAGGCTTT < 41bp 0.815727304058986 0.590187671769317 0.24484843 0.30432564 prediction 0.451079264579337 Functional Loss - EPHX1 ENSG00000242861 ncRNA_intronic Human antisense chr1:226033082 chr1:226033083 . . 0 22 hm5C_associated_SNPs_78012 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:226033066-226033113
64251 chr7 106508561 106508561 1 + G A LUSC 106508558 + 106508538 106508578 41 CGTGGCTTGGTGACCCCGCGCATGGCGGAGGTGGCCAGCCG CGTGGCTTGGTGACCCCGCGCATAGCGGAGGTGGCCAGCCG < 41bp 0.794777801858731 0.569243547846126 0.30033237 0.10352409 prediction 0.451068508025211 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508558 chr7:106508561 nonsynonymous SNV 0.424 0 24 hm5C_associated_SNPs_78016 0 0 5 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr2 101591290 101591290 1 + G A STAD 101591287 + 101591267 101591307 41 CAAGGGCTCAAGCCTGGAACCTCGGCAGCACTTTAACACAC CAAGGGCTCAAGCCTGGAACCTCAGCAGCACTTTAACACAC < 41bp 0.775177957369395 0.54965135367459 0.04910922 0.053232312 prediction 0.451053207389609 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101591287 chr2:101591290 nonsynonymous SNV 0.935 0 24 hm5C_associated_SNPs_78018 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101591274-101591328
64251 chr19 5131486 5131486 1 + G T LUSC 5131483 + 5131463 5131503 41 AGTTTCCCCCATGGAGCTGACGGGGCCAGAGGACGGTGCAG AGTTTCCCCCATGGAGCTGACGGTGCCAGAGGACGGTGCAG < 41bp 0.725526075190465 0.316373259507922 0.91595626 0.65354043 prediction 0.451052150380929 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5131483 chr19:5131486 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_78020 0 0 8 BUD13 POSTAR2 ENCODE chr19:5131486-5131515
64251 chr7 100861498 100861498 1 + G T LUAD 100861496 + 100861476 100861516 41 AATGGTGGAGAAGAAAACTTCGGGTATGTGAGCCCCCGCGG AATGGTGGAGAAGAAAACTTCGTGTATGTGAGCCCCCGCGG < 41bp 0.902621400978868 0.677097961213761 0.8939116 0.30355835 prediction 0.451046879530214 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100861496 chr7:100861498 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_78021 0 0 5 DDX3X POSTAR2 ENCODE chr7:100861462-100861500
64251 chr2 238647880 238647880 1 + G A UCEC 238647877 + 238647857 238647897 41 CGGTGGCTGTGTGGGCAGCCCTCGGAGTACAGCGGCCACCT CGGTGGCTGTGTGGGCAGCCCTCAGAGTACAGCGGCCACCT < 41bp 0.78163429139127 0.556119956886824 0.7985524 0.3315053 prediction 0.451028669008892 Functional Loss - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238647877 chr2:238647880 synonymous SNV . 0 24 hm5C_associated_SNPs_78025 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:238647880-238647900
64251 chr2 219460424 219460424 1 + C T rs3731873 219460422 + 219460402 219460442 41 TCTTTTCTGCCCACATCTCACACAATTGAGGTGTCTGAACA TCTTTTCTGCCCACATCTCACATAATTGAGGTGTCTGAACA < 41bp 0.726337628004861 0.500828314199841 0.025621861 0.12964621 prediction 0.451018627610041 Functional Loss - CNOT9 ENSG00000144580 UTR3 Human protein_coding chr2:219460422 chr2:219460424 . . 0 23 hm5C_associated_SNPs_78026 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:219460362-219460441
64251 chr7 148949845 148949845 1 + T C rs79258601 148949844 + 148949824 148949864 41 CGGAGTTGGGTACAGAGATGCTGGGTGACTTGGAAGAGGAA CGGAGTTGGGTACAGAGATGCCGGGTGACTTGGAAGAGGAA < 41bp 0.725485863813115 0.477960073885453 0.77868056 0.8959056 prediction 0.45097172762623 Functional Loss - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148949844 chr7:148949845 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_78034 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:148949808-148949862
64251 chr17 79857947 79857947 1 + G A COAD 79857944 + 79857924 79857964 41 TGGAAGTTCAAGGAGTGAGGCCCGACCTGGCTCTCGCTGGA TGGAAGTTCAAGGAGTGAGGCCCAACCTGGCTCTCGCTGGA < 41bp 0.725480722511525 0.488290960110129 0.15375558 0.15769476 prediction 0.450961445023049 Functional Loss - ANAPC11 ENSG00000141552 CDS Human protein_coding chr17:79857944 chr17:79857947 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_78039 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79857862-79858053
64251 chr1 26885418 26885418 1 + C T SKCM 26885416 + 26885396 26885436 41 GCCCCGCAGGCACCCCTGCACTCGGTGGTACAGGTGAGGGG GCCCCGCAGGCACCCCTGCACTTGGTGGTACAGGTGAGGGG < 41bp 0.830136678224322 0.604657306054566 0.25201195 0.2998167 prediction 0.450958744339512 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885416 chr1:26885418 nonsynonymous SNV 0.871 1 23 hm5C_associated_SNPs_78040 0 0 3 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr17 79954451 79954451 1 + C T BLCA 79954449 + 79954429 79954469 41 CGTCCGGAGGACGCGGACACCTCAGGGCCCTGCTGCGAGCA CGTCCGGAGGACGCGGACACCTTAGGGCCCTGCTGCGAGCA < 41bp 0.808587715626485 0.5831107344121 0.5580339 0.24920669 prediction 0.45095396242877 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79954449 chr17:79954451 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_78042 0 0 5 GRWD1 POSTAR2 ENCODE chr17:79954446-79954473
64251 chr17 7490441 7490441 1 + T C rs372968763 7490440 + 7490420 7490460 41 TTGGGGGAGCATGGGAAGAGCTCAGGTGACAGAGCCAAAGG TTGGGGGAGCATGGGAAGAGCCCAGGTGACAGAGCCAAAGG < 41bp 0.749082914296359 0.52362013302919 0.3089822 0.4351856 prediction 0.450925562534339 Functional Loss - MPDU1 ENSG00000129255 intronic Human protein_coding chr17:7490440 chr17:7490441 . . 0 22 hm5C_associated_SNPs_78046 0 0 2 BUD13 POSTAR2 ENCODE chr17:7490377-7490471
64251 chr7 73610437 73610437 1 + G C rs560357870 73610433 + 73610413 73610453 41 AGTTCACTCCTTTCGCCGTGCGTGGTGGAGGCTGGCCTCTC AGTTCACTCCTTTCGCCGTGCGTGCTGGAGGCTGGCCTCTC < 41bp 0.725460536079143 0.434626701611359 0.7789574 0.32829368 prediction 0.450921072158287 Functional Loss - EIF4H ENSG00000106682 UTR3 Human protein_coding chr7:73610433 chr7:73610437 . . 0 25 hm5C_associated_SNPs_78048 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:73610437-73610468
64251 chr19 8436235 8436235 1 + T C SKCM 8436234 + 8436214 8436254 41 AACGCCGAGTTGCTGCAGTTCTCCGTGCACCTGGGTGGCGA AACGCCGAGTTGCTGCAGTTCCCCGTGCACCTGGGTGGCGA < 41bp 0.833311720760474 0.607852485617873 0.17543626 0.043009073 prediction 0.450918470285201 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436234 chr19:8436235 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_78050 0 0 1 SND1 POSTAR2 ENCODE chr19:8436131-8436286
64251 chr3 42240734 42240734 1 + T C STAD 42240733 + 42240713 42240753 41 GCAGTTGGAAGAGGCCGAGTCTCCAGACATCACGTACGGCC GCAGTTGGAAGAGGCCGAGTCCCCAGACATCACGTACGGCC < 41bp 0.725451845688353 0.453443418792523 0.9391922 0.16197494 prediction 0.450903691376705 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42240733 chr3:42240734 synonymous SNV . 0 22 hm5C_associated_SNPs_78054 0 0 8 BUD13 POSTAR2 ENCODE chr3:42240664-42240742
64251 chr17 18145296 18145296 1 + C T BRCA 18145294 + 18145274 18145314 41 CTCTGGACATTAACTGGCCCCGCGATGCCACCCAGGCCAGG CTCTGGACATTAACTGGCCCCGTGATGCCACCCAGGCCAGG < 41bp 0.823052233067241 0.597602555649304 0.035872072 0.052497298 prediction 0.450899354835873 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18145294 chr17:18145296 synonymous SNV . 0 23 hm5C_associated_SNPs_78056 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:18145257-18145297
64251 chr18 12308748 12308748 1 + G C CESC 12308747 + 12308727 12308767 41 CGGAGGCTACGTGGGAGACTCGGCGCTGCAGCTGGAGAGAA CGGAGGCTACGTGGGAGACTCCGCGCTGCAGCTGGAGAGAA < 41bp 0.779075202587549 0.553628524484211 0.8943635 0.6082239 prediction 0.450893356206677 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12308747 chr18:12308748 synonymous SNV . 0 22 hm5C_associated_SNPs_78058 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr18:12308720-12308760
64251 chr8 40011185 40011185 1 + A C LIHC 40011184 + 40011164 40011204 41 ACATCTTTGAAAACACAGACCAAGAATCACTAGAAAGGCTC ACATCTTTGAAAACACAGACCCAGAATCACTAGAAAGGCTC < 41bp 0.778330395357369 0.552890837982722 0.022023529 0.051391065 prediction 0.450879114749293 Functional Loss - C8orf4 ENSG00000176907 CDS Human protein_coding chr8:40011184 chr8:40011185 nonsynonymous SNV 0.748 2 22 hm5C_associated_SNPs_78060 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr8:40011160-40011200
64251 chr15 91308599 91308599 1 + G A COAD 91308596 + 91308576 91308616 41 GTCACTGTTGTCATTTCTCCCTTGAGATCACTTATCGTAGA GTCACTGTTGTCATTTCTCCCTTAAGATCACTTATCGTAGA < 41bp 0.725439455142362 0.494505273243789 0.032717466 0.021636724 prediction 0.450878910284724 Functional Loss - BLM ENSG00000197299 CDS Human protein_coding chr15:91308596 chr15:91308599 synonymous SNV . 0 24 hm5C_associated_SNPs_78061 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:91308582-91308612
64251 chr6 44121578 44121578 1 + C T UCEC 44121576 + 44121556 44121596 41 CTCTTCTTTTCCACCATGCGCACGGGTGAGGGATCCCTACC CTCTTCTTTTCCACCATGCGCATGGGTGAGGGATCCCTACC < 41bp 0.725437830357088 0.469625984330713 0.7719847 0.8386966 prediction 0.450875660714175 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44121576 chr6:44121578 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_78063 0 0 2 DDX55 POSTAR2 ENCODE chr6:44121563-44121579
64251 chr19 36033431 36033431 1 - G A rs200556774 36033433 - 36033413 36033453 41 ATTGGTGCATCCGGTGAGGGCGCGGAGATGACCACACGTTG ATTGGTGCATCCGGTGAGGGCGTGGAGATGACCACACGTTG < 41bp 0.792295941753834 0.566858184470583 0.8167181 0.6836177 prediction 0.450875514566503 Functional Loss - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36033433 chr19:36033431 nonsynonymous SNV 0.016 4 23 hm5C_associated_SNPs_78064 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36033403-36033445
64251 chr19 50309968 50309968 1 + G C LUAD 50309964 + 50309944 50309984 41 CGGCTGACCCTGCGCACCAGCAAGGAGCCCGTCTCCCGTCA CGGCTGACCCTGCGCACCAGCAAGCAGCCCGTCTCCCGTCA < 41bp 0.852480000195593 0.627043746672737 0.8910712 0.7129221 prediction 0.450872507045712 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50309964 chr19:50309968 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_78066 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:50309949-50309980
64251 chr14 101348302 101348302 1 + C T CESC 101348300 + 101348280 101348320 41 AGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCG AGAAGGATCATGATGGGCTCCTTGGTGTTCTCCAGGTAGCG < 41bp 0.73684624484732 0.511414567335575 0.17964637 0.10361746 prediction 0.45086335502349 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101348300 chr14:101348302 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_78068 0 0 6 TNRC6B POSTAR2 GSE21578,GSM545219 chr14:101348285-101348306
64251 chr11 65265258 65265258 1 + G T rs116042952 65265255 + 65265235 65265275 41 AAAGGACTGGGGCCCCGCAACTGGCCTCTCCTGCCCTCTTA AAAGGACTGGGGCCCCGCAACTGTCCTCTCCTGCCCTCTTA < 41bp 0.725429490249035 0.347952092662339 0.30171 0.16498733 prediction 0.45085898049807 Functional Loss - MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65265255 chr11:65265258 . . 0 24 hm5C_associated_SNPs_78069 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65265234-65265272
64251 chr5 251542 251542 1 + C T COAD 251540 + 251520 251560 41 GACCATCTACGGAGCAGAGGCACGGAAGGAGTCACGGGGCG GACCATCTACGGAGCAGAGGCATGGAAGGAGTCACGGGGCG < 41bp 0.830662007843603 0.605234175762396 0.57155246 0.518198 prediction 0.450855664162415 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:251540 chr5:251542 nonsynonymous SNV 0.664 4 23 hm5C_associated_SNPs_78071 4 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:251524-251578
64251 chr16 83933047 83933047 1 + G T LUAD 83933044 + 83933024 83933064 41 CGCGGGGCTTCGGCGTGGACCACGGCCAGGTGGCGGAGCAG CGCGGGGCTTCGGCGTGGACCACTGCCAGGTGGCGGAGCAG < 41bp 0.927887037895413 0.702462966385295 0.42846724 0.32591248 prediction 0.450848143020237 Functional Loss - MLYCD ENSG00000103150 CDS Human protein_coding chr16:83933044 chr16:83933047 nonsynonymous SNV 0.841 3 24 hm5C_associated_SNPs_78073 0 0 1 FASTKD2 POSTAR2 ENCODE chr16:83932959-83933061
64251 chr16 2757632 2757632 1 + G A rs543426311 2757629 + 2757609 2757649 41 AGACACTCCCAGTCAGCCCGCTCGATCCTGAAGATCGTGTG AGACACTCCCAGTCAGCCCGCTCAATCCTGAAGATCGTGTG < 41bp 0.754848185898172 0.529426235568026 0.059527427 0.042493492 prediction 0.450843900660293 Functional Loss - KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2757629 chr16:2757632 . . 0 24 hm5C_associated_SNPs_78075 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2757611-2757638
64251 chr12 81472066 81472066 1 + C T PAAD 81472064 + 81472044 81472084 41 CGGGGATGCAGGGCACTGTCCTCCGGCAGTGGCAGCGAGTA CGGGGATGCAGGGCACTGTCCTTCGGCAGTGGCAGCGAGTA < 41bp 0.813924385067318 0.588507034930959 0.6097826 0.37993872 prediction 0.450834700272718 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81472064 chr12:81472066 nonsynonymous SNV 0.016 1 23 hm5C_associated_SNPs_78077 0 0 3 DDX3X POSTAR2 ENCODE chr12:81471999-81472089
64251 chr4 1806609 1806609 1 + G T UCEC 1806606 + 1806586 1806626 41 CACACCACTGGTGCGCATCGCAAGGCTGTCCTCAGGGGAGG CACACCACTGGTGCGCATCGCAATGCTGTCCTCAGGGGAGG < 41bp 0.725415645597212 0.318617821466694 0.4081987 0.14433819 prediction 0.450831291194424 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1806606 chr4:1806609 nonsynonymous SNV 0.713 5 24 hm5C_associated_SNPs_78079 0 0 4 DDX24 POSTAR2 ENCODE chr4:1806560-1806668
64251 chr17 1650432 1650432 1 + G A UCEC 1650429 + 1650409 1650449 41 TGGGCCCCGGCGCGTTCCGACTGGCTGCCAGGATGTACCTG TGGGCCCCGGCGCGTTCCGACTGACTGCCAGGATGTACCTG < 41bp 0.725413880004755 0.465296515900433 0.095786035 0.02754724 prediction 0.45082776000951 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1650429 chr17:1650432 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_78080 0 0 1 SND1 POSTAR2 ENCODE chr17:1650356-1650436
64251 chr18 673016 673016 1 + C T rs699517 673014 + 672994 673034 41 TTAGGGTGCTTTCAAAGGAGCTCGAAGGATATTGTCAGTCT TTAGGGTGCTTTCAAAGGAGCTTGAAGGATATTGTCAGTCT < 41bp 0.807154377795513 0.581740794938272 0.13978946 0.12405026 prediction 0.450827165714481 Functional Loss - ENOSF1;TYMS ENSG00000132199;ENSG00000176890 UTR3 Human other chr18:673014 chr18:673016 . . 0 23 hm5C_associated_SNPs_78081 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:672973-673064
64251 chr1 13944185 13944185 1 + A C rs140776225 13944184 + 13944164 13944204 41 CCTCAGATTCCATATTTGAACACCAGCTGATTGAGAGAAGG CCTCAGATTCCATATTTGAACCCCAGCTGATTGAGAGAAGG < 41bp 0.731450960209672 0.506047130394915 0.17269716 0.11978546 prediction 0.450807659629514 Functional Loss - PDPN ENSG00000162493 UTR3 Human protein_coding chr1:13944184 chr1:13944185 . . 0 22 hm5C_associated_SNPs_78087 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:13944137-13944192
64251 chr10 89717673 89717673 1 + G A BLCA 89717670 + 89717650 89717690 41 TTCCTCCAATTCAGGACCCACACGACGGGAAGACAAGTTCA TTCCTCCAATTCAGGACCCACACAACGGGAAGACAAGTTCA < 41bp 0.739179109090182 0.513780136032038 0.027666122 0.0059271753 prediction 0.450797946116289 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717670 chr10:89717673 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_78088 9 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:89717622-89717684
64251 chr12 85695231 85695231 1 + C T UCEC 85695229 + 85695209 85695249 41 ATGAAAGCCAAGGAGCACACCGCCAATATTTCATGGGCCAT ATGAAAGCCAAGGAGCACACCGTCAATATTTCATGGGCCAT < 41bp 0.725396803964625 0.441275015406388 0.19040295 0.033494145 prediction 0.45079360792925 Functional Loss - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85695229 chr12:85695231 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_78090 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:85695223-85695250
64251 chr2 200824584 200824584 1 + C T SKCM 200824581 + 200824561 200824601 41 TTTACATCAACAGGAGACATCTCCATTTACTATGATGAGAA TTTACATCAACAGGAGACATCTCTATTTACTATGATGAGAA < 41bp 0.725393714174615 0.492842352916383 0.9511856 0.80394673 prediction 0.45078742834923 Functional Loss - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200824581 chr2:200824584 synonymous SNV . 0 24 hm5C_associated_SNPs_78093 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr2:200824558-200824599
64251 chr3 88189320 88189320 1 + A C COAD 88189319 + 88189299 88189339 41 AGCTGCCGTTCCAGCTTGCCCAGCACACAAAAAGTCACAGG AGCTGCCGTTCCAGCTTGCCCCGCACACAAAAAGTCACAGG < 41bp 0.777414031884213 0.552029702420577 0.13672996 0.03728652 prediction 0.450768658927272 Functional Loss - ZNF654 ENSG00000175105 CDS Human protein_coding chr3:88189319 chr3:88189320 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_78101 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:88189313-88189335
64251 chr6 53660063 53660063 1 + C T rs139186286 53660061 + 53660041 53660081 41 CGGCGGGGGCGGCGATGTTCCACTGCATCCCCCTGTGGCGG CGGCGGGGGCGGCGATGTTCCATTGCATCCCCCTGTGGCGG < 41bp 0.771899886439828 0.546517321752986 0.028051496 0.04187563 prediction 0.450765129373683 Functional Loss - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53660061 chr6:53660063 synonymous SNV . 0 23 hm5C_associated_SNPs_78104 0 0 2 DDX3X POSTAR2 ENCODE chr6:53660026-53660097
64251 chr16 3169876 3169876 1 + G A LUSC 3169873 + 3169853 3169893 41 GCCAAGCGCTTCACCCGCCGCTCGGACTTGGTCACCCACCA GCCAAGCGCTTCACCCGCCGCTCAGACTTGGTCACCCACCA < 41bp 0.779698505270327 0.554318373498163 0.31430295 0.12042445 prediction 0.450760263544327 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3169873 chr16:3169876 synonymous SNV . 0 24 hm5C_associated_SNPs_78106 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3169872-3169886
64251 chr21 45564711 45564711 1 + C T rs34002183 45564709 + 45564689 45564729 41 GTAACTCTGCACACGAAGCTCACGTGGACCAGAAAAACAAG GTAACTCTGCACACGAAGCTCATGTGGACCAGAAAAACAAG < 41bp 0.725379599347622 0.465894766855301 0.35701185 0.2964084 prediction 0.450759198695245 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45564709 chr21:45564711 synonymous SNV . 0 23 hm5C_associated_SNPs_78107 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:45564660-45564723
64251 chr3 134268926 134268926 1 + G T SARC 134268923 + 134268903 134268943 41 AGTTGAAAGAACAGATTTTACAGGGTGAACAAAGTTACAGT AGTTGAAAGAACAGATTTTACAGTGTGAACAAAGTTACAGT < 41bp 0.725376192451982 0.336998101249287 0.6531883 0.09475407 prediction 0.450752384903964 Functional Loss - CEP63 ENSG00000182923 CDS Human protein_coding chr3:134268923 chr3:134268926 nonsynonymous SNV 0.972 1 24 hm5C_associated_SNPs_78110 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:134268916-134268936
64251 chr19 11094925 11094925 1 + G A BLCA 11094922 + 11094902 11094942 41 AGCCATGCTGGGCCCTAGCCCGGGTCCCTCGCCGGGCTCCG AGCCATGCTGGGCCCTAGCCCGGATCCCTCGCCGGGCTCCG < 41bp 0.755668014229306 0.530292219165439 0.90333366 0.880321 prediction 0.450751590127734 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11094922 chr19:11094925 nonsynonymous SNV 0.487 5 24 hm5C_associated_SNPs_78112 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11094917-11094940
64251 chr19 33183393 33183393 1 + G A PAAD 33183390 + 33183370 33183410 41 CGACCGCGTGCGCCAGGACCCGCGCCACTTCCTGCGGCTGT CGACCGCGTGCGCCAGGACCCGCACCACTTCCTGCGGCTGT < 41bp 0.78133222768227 0.555958105131067 0.3336153 0.2189349 prediction 0.450748245102406 Functional Loss - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33183390 chr19:33183393 nonsynonymous SNV 0.167 0 24 hm5C_associated_SNPs_78113 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:33183383-33183423
64251 chr12 108959132 108959132 1 + T C HNSC 108959131 + 108959111 108959151 41 AAAGGGGAAGATTGTGGATGCTAGGTTTAAAACATTTGGCT AAAGGGGAAGATTGTGGATGCCAGGTTTAAAACATTTGGCT < 41bp 0.725367771564278 0.488839224748016 0.13281146 0.27113962 prediction 0.450735543128556 Functional Loss - ISCU ENSG00000136003 CDS Human protein_coding chr12:108959131 chr12:108959132 synonymous SNV . 0 22 hm5C_associated_SNPs_78116 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:108959094-108959132
64251 chr12 124181003 124181003 1 + A T UCEC 124180999 + 124180979 124181019 41 CCTGTCCGAGCTCTAAATATCAACAGGATGAATAATGTCAC CCTGTCCGAGCTCTAAATATCAACTGGATGAATAATGTCAC < 41bp 0.725365494480782 0.391982128754475 0.1701827 0.115181684 prediction 0.450730988961564 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124180999 chr12:124181003 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_78119 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:124180988-124181015
64251 chr5 1038278 1038278 1 + C T rs200848747 1038276 + 1038256 1038296 41 CCCCACCGCCACCCTACGGCCACAAGCGGTACCGCCAAAAG CCCCACCGCCACCCTACGGCCATAAGCGGTACCGCCAAAAG < 41bp 0.74689524278054 0.52153250901032 0.36653793 0.45843816 prediction 0.45072546754044 Functional Loss - NKD2 ENSG00000145506 CDS Human protein_coding chr5:1038276 chr5:1038278 synonymous SNV . 0 23 hm5C_associated_SNPs_78121 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:1038218-1038288
64251 chr19 990282 990282 1 + C T UCEC 990280 + 990260 990300 41 AGGCACGTCTGGTCTCACCACGCGCTCCCCATCACGGACCT AGGCACGTCTGGTCTCACCACGTGCTCCCCATCACGGACCT < 41bp 0.808651774369572 0.583291830721985 0.44453144 0.4932682 prediction 0.450719887295174 Functional Loss - WDR18 ENSG00000065268 CDS Human protein_coding chr19:990280 chr19:990282 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_78123 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:990281-990282
64251 chr17 79952715 79952715 1 + C T THCA 79952713 + 79952693 79952733 41 CCAGGGAGTGCCTGCAGCACCCCGGCGGGGCCACCCCAGTC CCAGGGAGTGCCTGCAGCACCCTGGCGGGGCCACCCCAGTC < 41bp 0.774728476591281 0.549372630592329 0.07655555 0.111144215 prediction 0.450711691997904 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79952713 chr17:79952715 synonymous SNV . 0 23 hm5C_associated_SNPs_78127 0 0 5 BUD13 POSTAR2 ENCODE chr17:79952685-79952734
64251 chr2 37464951 37464951 1 + G T PAAD 37464949 + 37464929 37464969 41 GATGGCCACTGGAAAAAGCACAGCTTTCCAGCTGGTGGAAC GATGGCCACTGGAAAAAGCACATCTTTCCAGCTGGTGGAAC < 41bp 0.725345907835807 0.375635670098909 0.050920874 0.072203875 prediction 0.450691815671615 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37464949 chr2:37464951 nonsynonymous SNV 0.850 0 23 hm5C_associated_SNPs_78134 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:37464951-37464977
64251 chr19 2873574 2873574 1 + C T SKCM 2873572 + 2873552 2873592 41 TGAATCCTGCTCAGAGAAAACTCTACAGAGATGTCATGCTG TGAATCCTGCTCAGAGAAAACTTTACAGAGATGTCATGCTG < 41bp 0.725344753286235 0.429697719346221 0.8013343 0.0387263 prediction 0.450689506572471 Functional Loss - ZNF556 ENSG00000172000 CDS Human protein_coding chr19:2873572 chr19:2873574 synonymous SNV . 0 23 hm5C_associated_SNPs_78136 0 0 2 GRWD1 POSTAR2 ENCODE chr19:2873504-2873635
64251 chr6 74210321 74210321 1 + G T LUSC 74210318 + 74210298 74210338 41 TCGGGGCTGCTAGTCGCATACCCGGAGTAACACCTGCCGCC TCGGGGCTGCTAGTCGCATACCCTGAGTAACACCTGCCGCC < 41bp 0.725342770664924 0.336640881143868 0.24537417 0.05183947 prediction 0.450685541329849 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74210318 chr6:74210321 stopgain 0.997 1 24 hm5C_associated_SNPs_78137 0 0 1 GRWD1 POSTAR2 ENCODE chr6:74210293-74210356
64251 chr6 151670625 151670625 1 + G A rs149525947 151670622 + 151670602 151670642 41 AGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGCT AGGAGCCGGCAGAAAGTGCCCACAAGCCCCGGTTATCAGCT < 41bp 0.77507543594491 0.549734445140631 0.10132736 0.24160004 prediction 0.450681981608558 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670622 chr6:151670625 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_78140 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr6:151670613-151670631
64251 chr14 67787833 67787833 1 + C T SKCM 67787831 + 67787811 67787851 41 TAGAGATTACCACTTTGTTTCGCGGCAAGCATTCGAGGCAG TAGAGATTACCACTTTGTTTCGTGGCAAGCATTCGAGGCAG < 41bp 0.842358513112026 0.617019641599042 0.5554439 0.79110265 prediction 0.450677743025967 Functional Loss - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67787831 chr14:67787833 nonsynonymous SNV 0.982 4 23 hm5C_associated_SNPs_78142 0 0 1 UCHL5 POSTAR2 ENCODE chr14:67787792-67787873
64251 chr17 30815228 30815228 1 + C T STAD 30815226 + 30815206 30815246 41 TGGCAGGACCAGGGCTTCATCACGCCGGCCAACGTGGTCTT TGGCAGGACCAGGGCTTCATCATGCCGGCCAACGTGGTCTT < 41bp 0.831396485227546 0.606067498505773 0.9290025 0.91683245 prediction 0.450657973443545 Functional Loss - CDK5R1 ENSG00000176749 CDS Human protein_coding chr17:30815226 chr17:30815228 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_78149 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:30815209-30815229
64251 chr6 31947235 31947235 1 + G T READ 31947233 + 31947213 31947253 41 GACCGTATGCTGGGGCAGTGCAGAAATTTCTAGCTTCAGTA GACCGTATGCTGGGGCAGTGCATAAATTTCTAGCTTCAGTA < 41bp 0.725325861801516 0.452190028718315 0.2656507 0.22131637 prediction 0.450651723603031 Functional Loss - STK19 ENSG00000204344 CDS Human protein_coding chr6:31947233 chr6:31947235 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_78154 0 0 1 BUD13 POSTAR2 ENCODE chr6:31947179-31947239
64251 chr3 122432362 122432362 1 + G A SKCM 122432359 + 122432339 122432379 41 CAGGTGGCTTCTGGAGATATCACGAAAGAAGAGGCAGATGT CAGGTGGCTTCTGGAGATATCACAAAAGAAGAGGCAGATGT < 41bp 0.731052532478443 0.505728147146549 0.2142849 0.16846728 prediction 0.450648770663788 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122432359 chr3:122432362 synonymous SNV . 0 24 hm5C_associated_SNPs_78155 0 0 2 EIF3H POSTAR2 ENCODE chr3:122432310-122432378
64251 chr8 98656880 98656880 1 + G A UCEC 98656877 + 98656857 98656897 41 GCTGGAGCCGAAACGGTACCCCGGCTGGGTGATCCTGGTGG GCTGGAGCCGAAACGGTACCCCGACTGGGTGATCCTGGTGG < 41bp 0.768685595434868 0.543363039972282 0.15919086 0.09014794 prediction 0.450645110925172 Functional Loss - MTDH ENSG00000147649 CDS Human protein_coding chr8:98656877 chr8:98656880 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_78157 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:98656872-98656893
64251 chr20 36031656 36031656 1 + C T LUAD 36031654 + 36031634 36031674 41 CGGAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCAGTGC CGGAGTGTCCCGAGTCCCTGCATGACCTCATGTGCCAGTGC < 41bp 0.813919059026687 0.588602024990029 0.09076381 0.19980803 prediction 0.450634068073317 Functional Loss - SRC ENSG00000197122 CDS Human protein_coding chr20:36031654 chr20:36031656 synonymous SNV . 0 23 hm5C_associated_SNPs_78158 0 0 1 RPS3 POSTAR2 ENCODE chr20:36031612-36031663
64251 chr3 148714590 148714590 1 + G C LUSC 148714586 + 148714566 148714606 41 AATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTC AATTGTCAGCAGCACCAGACCCAGCGTGGCCTGACTGCTTC < 41bp 0.725313808665842 0.433840371176278 0.8087454 0.36639926 prediction 0.450627617331683 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148714586 chr3:148714590 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_78162 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:148714590-148714616
64251 chr12 88440676 88440676 1 + G A rs9262 88440673 + 88440653 88440693 41 CTTCATTGAAGCACAATGATCTCGTGTCCTGGTTTGAAGAT CTTCATTGAAGCACAATGATCTCATGTCCTGGTTTGAAGAT < 41bp 0.726616411576938 0.501305726074432 0.032059968 0.0220941 prediction 0.450621371005013 Functional Loss - C12orf29 ENSG00000133641 CDS Human protein_coding chr12:88440673 chr12:88440676 nonsynonymous SNV 0.975 0 24 hm5C_associated_SNPs_78164 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:88440641-88440695
64251 chr2 187370550 187370550 1 + G T UCEC 187370548 + 187370528 187370568 41 CAGATGATACCCGCTACACCCAGGGAACAGGTGGTGATGAG CAGATGATACCCGCTACACCCATGGAACAGGTGGTGATGAG < 41bp 0.901177393936586 0.675869070546025 0.9117116 0.79649764 prediction 0.450616646781121 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370548 chr2:187370550 nonsynonymous SNV 0.985 0 23 hm5C_associated_SNPs_78166 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:187370453-187370568
64251 chr17 34964140 34964140 1 + C T UCEC 34964138 + 34964118 34964158 41 CAGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAAGCAC CAGGGCTGGCTCGTGGCCGGCATGGTGGGCTGCCCAAGCAC < 41bp 0.821082196776491 0.595781385349598 0.88698035 0.8903717 prediction 0.450601622853785 Functional Loss - MRM1 ENSG00000129282 CDS Human other chr17:34964138 chr17:34964140 nonsynonymous SNV 0.651 3 23 hm5C_associated_SNPs_78169 0 0 1 BUD13 POSTAR2 ENCODE chr17:34964087-34964171
64251 chr21 45938788 45938788 1 + A T rs587648381 45938784 + 45938764 45938804 41 CCAGTATGATCCTGATGACACATGACTGGTGTGGAGCCCCG CCAGTATGATCCTGATGACACATGTCTGGTGTGGAGCCCCG < 41bp 0.725289623481465 0.436269200353832 0.33914596 0.3196139 prediction 0.45057924696293 Functional Loss - TSPEAR-AS2 ENSG00000182912 UTR3 Human antisense chr21:45938784 chr21:45938788 . . 0 25 hm5C_associated_SNPs_78171 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45938745-45938867
64251 chr11 134131669 134131669 1 + T C UCEC 134131668 + 134131648 134131688 41 TGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATG TGGCTGATATGGCAACAAGGCCGGTGGCCGCGCGGCTGATG < 41bp 0.774019328178535 0.548730595666802 0.50704557 0.6721325 prediction 0.450577465023465 Functional Loss - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134131668 chr11:134131669 nonsynonymous SNV 0.994 5 22 hm5C_associated_SNPs_78172 0 0 1 PPIG POSTAR2 ENCODE chr11:134131656-134131724
64251 chr19 7518461 7518461 1 + G T LUSC 7518459 + 7518439 7518479 41 TGTGAGAAGGGCCAGCGCCTCAGGGAGATCGCAGGGAAGAT TGTGAGAAGGGCCAGCGCCTCATGGAGATCGCAGGGAAGAT < 41bp 0.725287119493322 0.369679591682475 0.88484 0.31199145 prediction 0.450574238986643 Functional Loss - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7518459 chr19:7518461 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_78173 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7518435-7518473
64251 chr7 128454866 128454866 1 + G A rs61730174 128454863 + 128454843 128454883 41 CTTCTGTTGTCAAAGAAGCCCGGGGGAAGAATGCTAATAAG CTTCTGTTGTCAAAGAAGCCCGGAGGAAGAATGCTAATAAG < 41bp 0.725284816250589 0.480979936860359 0.5230852 0.35334566 prediction 0.450569632501179 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128454863 chr7:128454866 nonsynonymous SNV 0.409 3 24 hm5C_associated_SNPs_78174 0 0 2 SLTM POSTAR2 ENCODE chr7:128454754-128454873
64251 chr17 53398199 53398199 1 + A C LUSC 53398195 + 53398175 53398215 41 AGGAAGGAGCTGGGCAAATGCAAGAACATACTTGCCAAGTA AGGAAGGAGCTGGGCAAATGCAAGCACATACTTGCCAAGTA < 41bp 0.929819846000693 0.704535041983241 0.86742544 0.5909558 prediction 0.450569608034904 Functional Loss - HLF ENSG00000108924 CDS Human protein_coding chr17:53398195 chr17:53398199 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_78175 0 0 2 PPIG POSTAR2 ENCODE chr17:53398106-53398202
64251 chr19 2807451 2807451 1 + C T LUSC 2807449 + 2807429 2807469 41 CCTCCCCGCAGATGAGCTGGCGCAGAAGCTGAAGCCCCTGG CCTCCCCGCAGATGAGCTGGCGTAGAAGCTGAAGCCCCTGG < 41bp 0.72528244137101 0.478065141713076 0.33970514 0.24995542 prediction 0.450564882742021 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2807449 chr19:2807451 stopgain 0.952 0 23 hm5C_associated_SNPs_78176 0 0 4 GRWD1 POSTAR2 ENCODE chr19:2807441-2807480
64251 chr16 87438036 87438036 1 + G T rs140810953 87438033 + 87438013 87438053 41 GTTTACTGTAACGGGGAAAACCAGATTCTTTGCATCTGGGC GTTTACTGTAACGGGGAAAACCATATTCTTTGCATCTGGGC < 41bp 0.725281786762111 0.346145352481432 0.90345824 0.8726052 prediction 0.450563573524223 Functional Loss - MAP1LC3B ENSG00000140941 UTR3 Human protein_coding chr16:87438033 chr16:87438036 . . 0 24 hm5C_associated_SNPs_78177 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:87437920-87438124
64251 chr15 90168628 90168628 1 + C T rs572113617 90168626 + 90168606 90168646 41 AAGAGGGCGGTGGGCTGTGGCGCCGGCTCCTCTTCCGGGAG AAGAGGGCGGTGGGCTGTGGCGTCGGCTCCTCTTCCGGGAG < 41bp 0.802699929481311 0.57742210190922 0.3509122 0.33851165 prediction 0.450555655144182 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90168626 chr15:90168628 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_78181 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:90168595-90168630
64251 chr20 46130955 46130955 1 + G A rs552132892 46130952 + 46130932 46130972 41 GCCGCGCCGCTTCCCCTCAGCCCGGGGGGCGGCCCGCGGCG GCCGCGCCGCTTCCCCTCAGCCCAGGGGGCGGCCCGCGGCG < 41bp 0.725277231631146 0.472005764097909 0.80565023 0.4100448 prediction 0.450554463262293 Functional Loss - NCOA3 ENSG00000124151 intronic Human protein_coding chr20:46130952 chr20:46130955 . . 0 24 hm5C_associated_SNPs_78184 0 0 7 EFTUD2 POSTAR2 ENCODE chr20:46130902-46130971
64251 chr9 36657333 36657333 1 + A C TGCT 36657329 + 36657309 36657349 41 TTGGTGTGAAGATGATTTATCAACAGGTGCTGCTACTCCCC TTGGTGTGAAGATGATTTATCAACCGGTGCTGCTACTCCCC < 41bp 0.725269056954146 0.323298935583555 0.2665534 0.25610793 prediction 0.450538113908292 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36657329 chr9:36657333 synonymous SNV . 0 25 hm5C_associated_SNPs_78190 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36657279-36657360
64251 chr2 110373120 110373120 1 + G A STAD 110373117 + 110373097 110373137 41 CCCTGCACTTGGCAGCCATGCACGGCCACGTGGAGGTGGTG CCCTGCACTTGGCAGCCATGCACAGCCACGTGGAGGTGGTG < 41bp 0.774130832701251 0.548861843568623 0.213296 0.077435136 prediction 0.450537978265256 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373117 chr2:110373120 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_78191 0 0 1 RBM15 POSTAR2 ENCODE chr2:110373106-110373142
64251 chr20 4680430 4680430 1 + G A STAD 4680427 + 4680407 4680447 41 AATATCACAATCAAGCAGCACACGGTCACCACAACCACCAA AATATCACAATCAAGCAGCACACAGTCACCACAACCACCAA < 41bp 0.758221022076535 0.532952080847708 0.11959094 0.06884125 prediction 0.450537882457654 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680427 chr20:4680430 synonymous SNV . 0 24 hm5C_associated_SNPs_78192 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr20:4680404-4680448
64251 chr1 236343283 236343283 1 + G T SARC 236343280 + 236343260 236343300 41 ATCCTGTCATTTTCTCAGAACAAGAGCGTCCATTCCTTTGA ATCCTGTCATTTTCTCAGAACAATAGCGTCCATTCCTTTGA < 41bp 0.725266203723969 0.332886377307975 0.15200853 0.045139104 prediction 0.450532407447938 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236343280 chr1:236343283 nonsynonymous SNV 0.801 0 24 hm5C_associated_SNPs_78195 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:236343226-236343289
64251 chr16 89789921 89789921 1 + G C rs201594480 89789917 + 89789897 89789937 41 ATGGGACAAAGAGACGGCGCCACGGCTGCCCCAGCACCGAG ATGGGACAAAGAGACGGCGCCACGCCTGCCCCAGCACCGAG < 41bp 0.72526485913427 0.43135166835874 0.39963478 0.17338318 prediction 0.450529718268541 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789917 chr16:89789921 nonsynonymous SNV 0.016 1 25 hm5C_associated_SNPs_78196 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89789913-89789962
64251 chr16 89789920 89789920 1 + G T LUAD 89789917 + 89789897 89789937 41 ATGGGACAAAGAGACGGCGCCACGGCTGCCCCAGCACCGAG ATGGGACAAAGAGACGGCGCCACTGCTGCCCCAGCACCGAG < 41bp 0.72526485913427 0.340827367884495 0.39963478 0.1664317 prediction 0.450529718268541 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789917 chr16:89789920 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_78197 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:89789900-89789920
64251 chr5 137754711 137754711 1 + C T rs114783842 137754709 + 137754689 137754729 41 CTCTGGTGGAGGAGGACCGGCACCAGTAACAACTCCAGAGC CTCTGGTGGAGGAGGACCGGCATCAGTAACAACTCCAGAGC < 41bp 0.725260302099187 0.428234323636839 0.28058642 0.23393467 prediction 0.450520604198375 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137754709 chr5:137754711 nonsynonymous SNV 0.174 0 23 hm5C_associated_SNPs_78198 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137754683-137754717
64251 chr19 31039137 31039137 1 + G C OV 31039133 + 31039113 31039153 41 GTTCTCTCCTCTGGAGATCACTCGGGGCAGGCCACGGGCAT GTTCTCTCCTCTGGAGATCACTCGCGGCAGGCCACGGGCAT < 41bp 0.858219443389642 0.632968805671711 0.54333305 0.2241399 prediction 0.450501275435863 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039133 chr19:31039137 nonsynonymous SNV 0.082 1 25 hm5C_associated_SNPs_78202 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:31039114-31039142
64251 chr9 138395624 138395624 1 + C T rs34149047 138395622 + 138395602 138395642 41 AGGGGCGGCATGCTGACCAACGCGCGCCTCCTCTTTGGCCC AGGGGCGGCATGCTGACCAACGTGCGCCTCCTCTTTGGCCC < 41bp 0.80330782231062 0.578057437349695 0.16970363 0.25570446 prediction 0.45050076992185 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395622 chr9:138395624 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_78203 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr17 41576268 41576268 1 + C T SKCM 41576266 + 41576246 41576286 41 TGAATTGGTTGAGGAAGAGCCTCCATTCCTGAGAGGGCACA TGAATTGGTTGAGGAAGAGCCTTCATTCCTGAGAGGGCACA < 41bp 0.725247860880244 0.40936624366574 0.9588223 0.31218517 prediction 0.450495721760488 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41576266 chr17:41576268 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_78204 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41576243-41576279
64251 chr14 50065825 50065825 1 + G A UCEC 50065822 + 50065802 50065842 41 CGGGGCAAGGGCGTCCGAGCCGTGTTGAGCCTCTGTCAGCA CGGGGCAAGGGCGTCCGAGCCGTATTGAGCCTCTGTCAGCA < 41bp 0.778753839169846 0.553512353975581 0.30111367 0.29710037 prediction 0.450482970388529 Functional Loss - LRR1 ENSG00000165501 CDS Human protein_coding chr14:50065822 chr14:50065825 synonymous SNV . 0 24 hm5C_associated_SNPs_78211 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:50065817-50065855
64251 chr1 111999270 111999270 1 + G A CESC 111999267 + 111999247 111999287 41 TGTAGCAAAAACTTGCCCAACTAGAAGAGGCGAAGCAGGCT TGTAGCAAAAACTTGCCCAACTAAAAGAGGCGAAGCAGGCT < 41bp 0.750351217266365 0.525110369017305 0.1846818 0.39711466 prediction 0.45048169649812 Functional Loss - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:111999267 chr1:111999270 nonsynonymous SNV 0.975 1 24 hm5C_associated_SNPs_78212 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:111999256-111999291
64251 chr19 49464183 49464183 1 + C T STAD 49464181 + 49464161 49464201 41 AGGGTGGTTGGGTGAGACTCCTCAAGCCTCCTCACCCCCAC AGGGTGGTTGGGTGAGACTCCTTAAGCCTCCTCACCCCCAC < 41bp 0.815165574014798 0.589925535569109 0.41555545 0.28195632 prediction 0.450480076891379 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464181 chr19:49464183 synonymous SNV . 0 23 hm5C_associated_SNPs_78213 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49464155-49464183
64251 chr19 804112 804112 1 + G T PRAD 804110 + 804090 804130 41 CCTCTAGAGTGATCCACATCCGGAAGCTCCCCATCGACGTC CCTCTAGAGTGATCCACATCCGTAAGCTCCCCATCGACGTC < 41bp 0.909698241749332 0.684473119311108 0.8559562 0.115030795 prediction 0.450450244876448 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804110 chr19:804112 synonymous SNV . 0 23 hm5C_associated_SNPs_78215 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:804037-804135
64251 chr22 30823345 30823345 1 + C T STAD 30823343 + 30823323 30823363 41 GTCCGCAAGTGGACCACCACCGCGCTTGGGCTGTTGACCAT GTCCGCAAGTGGACCACCACCGTGCTTGGGCTGTTGACCAT < 41bp 0.824987009062861 0.599764954014271 0.30178988 0.29746228 prediction 0.450444110097181 Functional Loss - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30823343 chr22:30823345 nonsynonymous SNV 0.017 0 23 hm5C_associated_SNPs_78216 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr22:30823290-30823346
64251 chr3 49049981 49049981 1 + G A UCEC 49049978 + 49049958 49049998 41 GGGTACCGGGGATTGGGGGTCTCGGCTCTCTGCTTCAAGTC GGGTACCGGGGATTGGGGGTCTCAGCTCTCTGCTTCAAGTC < 41bp 0.80796898611306 0.582749148341263 0.47276506 0.37482107 prediction 0.450439675543593 Functional Loss - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49049978 chr3:49049981 synonymous SNV . 0 24 hm5C_associated_SNPs_78218 0 0 42 FMR1 POSTAR2 GSE39682,GSM977616 chr3:49049915-49049989
64251 chr10 79814655 79814655 1 + A C UCEC 79814651 + 79814631 79814671 41 CCAGAAGCCTTGTCAGCAACCTTGACTCTGTCACCCCACAT CCAGAAGCCTTGTCAGCAACCTTGCCTCTGTCACCCCACAT < 41bp 0.725218625242193 0.323876984603229 0.3574287 0.32409954 prediction 0.450437250484386 Functional Loss - RPS24 ENSG00000138326 CDS Human protein_coding chr10:79814651 chr10:79814655 nonsynonymous SNV 0.017 1 25 hm5C_associated_SNPs_78219 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:79814604-79814663
64251 chr7 5257579 5257579 1 + C T OV 5257577 + 5257557 5257597 41 CTGCAAACATGATTCCGGCTCACGACAGTCCTTTAGCGGCA CTGCAAACATGATTCCGGCTCATGACAGTCCTTTAGCGGCA < 41bp 0.725218116482948 0.431734396219962 0.26477814 0.25336766 prediction 0.450436232965896 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5257577 chr7:5257579 synonymous SNV . 0 23 hm5C_associated_SNPs_78220 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:5257560-5257600
64251 chr8 26481823 26481823 1 + G A PRAD 26481820 + 26481800 26481840 41 TGGAAGCGCTTGTGAAGGATCACGGTAGGTTGCACTGAGTC TGGAAGCGCTTGTGAAGGATCACAGTAGGTTGCACTGAGTC < 41bp 0.791719761790071 0.566506438286567 0.72867185 0.49163732 prediction 0.450426647007008 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26481820 chr8:26481823 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_78223 0 0 3 BUD13 POSTAR2 ENCODE chr8:26481792-26481843
64251 chr18 72999303 72999303 1 + G A rs141313878 72999300 + 72999280 72999320 41 GAGGAGCTGGTGGAGAAGGTCACGGGCAAGGTCAACATCAA GAGGAGCTGGTGGAGAAGGTCACAGGCAAGGTCAACATCAA < 41bp 0.769639419070862 0.54443131348252 0.39956468 0.111591995 prediction 0.450416211176683 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999300 chr18:72999303 synonymous SNV . 0 24 hm5C_associated_SNPs_78225 1 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:72999280-72999311
64251 chr5 40692145 40692145 1 + C T GBM 40692143 + 40692123 40692163 41 TTCTGCCATGTCAGGCCACTCTCGCTCCTTCATCTCCCGGG TTCTGCCATGTCAGGCCACTCTTGCTCCTTCATCTCCCGGG < 41bp 0.725202135268307 0.449689099772086 0.13483784 0.086248845 prediction 0.450404270536615 Functional Loss - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40692143 chr5:40692145 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_78228 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:40692110-40692160
64251 chr1 213415130 213415130 1 + G A LUSC 213415127 + 213415107 213415147 41 TAACAGAGAAACACTATGCACAGGAGGATCCCAGGATGTTA TAACAGAGAAACACTATGCACAGAAGGATCCCAGGATGTTA < 41bp 0.725201241415891 0.494854379167812 0.59136635 0.23814404 prediction 0.450402482831783 Functional Loss - RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213415127 chr1:213415130 nonsynonymous SNV 0.381 0 24 hm5C_associated_SNPs_78231 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:213415121-213415144
64251 chr19 9939519 9939519 1 + G A COAD 9939516 + 9939496 9939536 41 ATGTCTCTTTTTCTTAGGTACACGATTTTTAAGGACCACGT ATGTCTCTTTTTCTTAGGTACACAATTTTTAAGGACCACGT < 41bp 0.743151283163799 0.517951053625702 0.03748557 0.019422114 prediction 0.450400459076193 Functional Loss - UBL5 ENSG00000198258 CDS Human protein_coding chr19:9939516 chr19:9939519 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_78232 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:9939511-9939550
64251 chr7 150027911 150027911 1 + T C UCEC 150027910 + 150027890 150027930 41 CCCACCAGGGTAGCCAAGAGCTCCGGGGTGGAGGGGAGAAG CCCACCAGGGTAGCCAAGAGCCCCGGGGTGGAGGGGAGAAG < 41bp 0.760851032148627 0.53565461118399 0.5805096 0.5848584 prediction 0.450392841929273 Functional Loss - ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150027910 chr7:150027911 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_78234 0 0 2 RBM15 POSTAR2 ENCODE chr7:150027904-150027966
64251 chr22 35719503 35719503 1 + G A GBM 35719500 + 35719480 35719520 41 CCCTCTCAGTCCTGGGCTGACGCGTTCCGCAGCTCGCCCGA CCCTCTCAGTCCTGGGCTGACGCATTCCGCAGCTCGCCCGA < 41bp 0.771611635157094 0.546417350519749 0.17627198 0.13310444 prediction 0.45038856927469 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719500 chr22:35719503 synonymous SNV . 0 24 hm5C_associated_SNPs_78235 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:35719487-35719521
64251 chr5 76028911 76028911 1 + G A GBM 76028908 + 76028888 76028928 41 TTTGTGCCGCTGATCATTTCCACGGTCTGTTATGTGTCTAT TTTGTGCCGCTGATCATTTCCACAGTCTGTTATGTGTCTAT < 41bp 0.725193684362354 0.498049580232034 0.6367563 0.46904024 prediction 0.450387368724708 Functional Loss - F2R ENSG00000181104 CDS Human protein_coding chr5:76028908 chr5:76028911 synonymous SNV . 0 24 hm5C_associated_SNPs_78236 0 0 3 PTBP1 POSTAR2 GSE19323,GSM480479 chr5:76028900-76028920
64251 chr5 76028910 76028910 1 + C T STAD 76028908 + 76028888 76028928 41 TTTGTGCCGCTGATCATTTCCACGGTCTGTTATGTGTCTAT TTTGTGCCGCTGATCATTTCCATGGTCTGTTATGTGTCTAT < 41bp 0.725193684362354 0.471331710498436 0.6367563 0.61710155 prediction 0.450387368724708 Functional Loss - F2R ENSG00000181104 CDS Human protein_coding chr5:76028908 chr5:76028910 nonsynonymous SNV 0.980 0 23 hm5C_associated_SNPs_78237 0 0 3 PTBP1 POSTAR2 GSE19323,GSM480479 chr5:76028900-76028920
64251 chr11 63753935 63753935 1 + G T SARC 63753933 + 63753913 63753953 41 GCGGCGCTGTTTAAAGATGGCGGCGGAGGAACCTCAGCAGC GCGGCGCTGTTTAAAGATGGCGTCGGAGGAACCTCAGCAGC < 41bp 0.83178930318997 0.606595991162878 0.8701861 0.6632729 prediction 0.450386624054184 Functional Loss - OTUB1 ENSG00000167770;ENSG00000256100 CDS Human other chr11:63753933 chr11:63753935 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_78238 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:63753920-63753940
64251 chr7 98957329 98957329 1 + G A LUSC 98957326 + 98957306 98957346 41 GCCACAACTGAGGACCGCAACACGGCCTTGGAGACGCTGCA GCCACAACTGAGGACCGCAACACAGCCTTGGAGACGCTGCA < 41bp 0.725189443938571 0.482819063416706 0.35002786 0.06284934 prediction 0.450378887877141 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98957326 chr7:98957329 synonymous SNV . 0 24 hm5C_associated_SNPs_78240 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:98957325-98957350
64251 chr7 98957328 98957328 1 + C T STAD 98957326 + 98957306 98957346 41 GCCACAACTGAGGACCGCAACACGGCCTTGGAGACGCTGCA GCCACAACTGAGGACCGCAACATGGCCTTGGAGACGCTGCA < 41bp 0.725189443938571 0.455346872278391 0.35002786 0.30930668 prediction 0.450378887877141 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98957326 chr7:98957328 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_78241 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:98957325-98957350
64251 chr7 134643009 134643009 1 + A C LUSC 134643008 + 134642988 134643028 41 GCAATAGTCTCCAAGATTGACAGCAGACTGGAGCAGTATAC GCAATAGTCTCCAAGATTGACCGCAGACTGGAGCAGTATAC < 41bp 0.725189259795353 0.480841752224386 0.41617343 0.18414313 prediction 0.450378519590707 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134643008 chr7:134643009 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_78242 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:134642994-134643023
64251 chrX 75397794 75397794 1 + G A UCEC 75397791 + 75397771 75397811 41 CTATGACTCAATTGAGACTACAAGTACCACGGTGCTACTTG CTATGACTCAATTGAGACTACAAATACCACGGTGCTACTTG < 41bp 0.737626288421942 0.512437898042065 0.7997804 0.2766857 prediction 0.450376780759755 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397791 chrX:75397794 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_78243 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:75397787-75397812
64251 chr5 137803252 137803252 1 + A C BRCA 137803248 + 137803228 137803268 41 GGCCAGAAGCCCTTCCAGTGCCGCATCTGCATGCGCAACTT GGCCAGAAGCCCTTCCAGTGCCGCCTCTGCATGCGCAACTT < 41bp 0.725156746873465 0.3207068381771 0.049530208 0.047266692 prediction 0.45031349374693 Functional Loss - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803248 chr5:137803252 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_78257 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137803240-137803260
64251 chr17 40717265 40717265 1 + G A GBM 40717262 + 40717242 40717282 41 CAGAAGCAGCTGAAGATACTCACGGACATTATGTGGCCAAT CAGAAGCAGCTGAAGATACTCACAGACATTATGTGGCCAAT < 41bp 0.768906055103623 0.54374935010256 0.76796997 0.35782135 prediction 0.450313410002127 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40717262 chr17:40717265 synonymous SNV . 0 24 hm5C_associated_SNPs_78258 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:40717242-40717266
64251 chr17 37809812 37809812 1 + C T UCEC 37809810 + 37809790 37809830 41 CAAGCTGCCCAGGGAGCTGACCCGAGACTTGGAGCGCAGCC CAAGCTGCCCAGGGAGCTGACCTGAGACTTGGAGCGCAGCC < 41bp 0.725152785198445 0.462182530813199 0.7266345 0.8431262 prediction 0.450305570396889 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37809810 chr17:37809812 stopgain 0.003 0 23 hm5C_associated_SNPs_78262 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:37809800-37809820
64251 chr4 160253700 160253700 1 + C T SKCM 160253697 + 160253677 160253717 41 ATTAAAAAGGCCAGTCGCTACTCCATTCCAGATCTTGCTGT ATTAAAAAGGCCAGTCGCTACTCTATTCCAGATCTTGCTGT < 41bp 0.754655965157988 0.529507206936299 0.96099675 0.93230635 prediction 0.450297516443379 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160253697 chr4:160253700 synonymous SNV . 0 24 hm5C_associated_SNPs_78266 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr4:160253680-160253700
64251 chrX 54835802 54835802 1 + G A COAD 54835799 + 54835779 54835819 41 CGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGTAAGGCCTC CGAGAGTGGTGCAGGTCTAACTCACTTCCAGGTAAGGCCTC < 41bp 0.725135699291678 0.472764155926383 0.25796986 0.2002976 prediction 0.450271398583357 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54835799 chrX:54835802 nonsynonymous SNV 0.980 2 24 hm5C_associated_SNPs_78272 0 0 3 DDX3X POSTAR2 ENCODE chrX:54835776-54835810
64251 chr13 80107522 80107522 1 + T C UCEC 80107521 + 80107501 80107541 41 TAGCGTTGCTACCTCTCTTCCTACATACGATGAAGCTGAGA TAGCGTTGCTACCTCTCTTCCCACATACGATGAAGCTGAGA < 41bp 0.72512973666337 0.453401447250446 0.88908947 0.23514244 prediction 0.45025947332674 Functional Loss - NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80107521 chr13:80107522 synonymous SNV . 0 22 hm5C_associated_SNPs_78274 0 0 7 CPSF1 POSTAR2 GSE37401,GSM917672 chr13:80107499-80107531
64251 chr8 15397958 15397958 1 + C T rs201741917 15397956 + 15397936 15397976 41 CGCGATGGGGGCCCGGGGCGCTCCTTCACGCCGTAGGCAAG CGCGATGGGGGCCCGGGGCGCTTCTTCACGCCGTAGGCAAG < 41bp 0.777683152292423 0.55256359352939 0.35528165 0.3071928 prediction 0.450239117526067 Functional Loss - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15397956 chr8:15397958 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_78285 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:15397939-15397964
64251 chr17 37357471 37357471 1 + T C UCEC 37357470 + 37357450 37357490 41 TTTTCTGTGTGTCTAGTATGCTCAGGCTTCAGAAGAGGCTC TTTTCTGTGTGTCTAGTATGCCCAGGCTTCAGAAGAGGCTC < 41bp 0.772669468659671 0.547560241199765 0.106850386 0.120996535 prediction 0.450218454919811 Functional Loss - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37357470 chr17:37357471 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_78291 0 0 26 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:37357460-37357480
64251 chr10 99340624 99340624 1 + G T SARC 99340622 + 99340602 99340642 41 CTGGGGACAGTTCCGTCGGACAGCACTGCACCGAGCTTCCC CTGGGGACAGTTCCGTCGGACATCACTGCACCGAGCTTCCC < 41bp 0.725107666790705 0.367711441664304 0.24427417 0.16857603 prediction 0.450215333581411 Functional Loss - ANKRD2 ENSG00000165887 CDS Human protein_coding chr10:99340622 chr10:99340624 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_78293 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:99340605-99340624
64251 chr7 50468108 50468108 1 + C T STAD 50468106 + 50468086 50468126 41 GCCTCCGAGAACTCGCAGGACGCGCTCCGCGTGGTCAGCAC GCCTCCGAGAACTCGCAGGACGTGCTCCGCGTGGTCAGCAC < 41bp 0.750084232578279 0.524981136966795 0.19339088 0.27490622 prediction 0.450206191222969 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50468106 chr7:50468108 nonsynonymous SNV 0.293 2 23 hm5C_associated_SNPs_78299 0 0 2 FMR1 POSTAR2 ENCODE chr7:50468044-50468128
64251 chr1 167973219 167973219 1 + G A UCEC 167973216 + 167973196 167973236 41 CAATAGAGGACGAGGAAGATCTCGACCCAGAGGTAATTTTT CAATAGAGGACGAGGAAGATCTCAACCCAGAGGTAATTTTT < 41bp 0.741244327625423 0.516145312074435 0.4353797 0.15083107 prediction 0.450198031101976 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:167973216 chr1:167973219 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_78302 0 0 7 DDX24 POSTAR2 ENCODE chr1:167973127-167973220
64251 chr1 210411352 210411352 1 + C T BLCA 210411350 + 210411330 210411370 41 AGATTCTGCGAGCCCATTGTCTCGGAAGGAGCTGCTGAAAT AGATTCTGCGAGCCCATTGTCTTGGAAGGAGCTGCTGAAAT < 41bp 0.850089501595099 0.624991927118426 0.7491117 0.39734298 prediction 0.450195148953345 Functional Loss - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210411350 chr1:210411352 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_78305 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:210411306-210411405
64251 chr11 44146379 44146379 1 + C T rs150687734 44146376 + 44146356 44146396 41 TCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAG TCCTGTCATCTCAGGTGGGTCTCTATCCTGAGTACAGAGAG < 41bp 0.760574768807516 0.535487000803178 0.9339206 0.41189086 prediction 0.450175536008677 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44146376 chr11:44146379 nonsynonymous SNV 0.384 4 24 hm5C_associated_SNPs_78313 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:44146374-44146403
64251 chr10 38345116 38345116 1 + G T LIHC 38345113 + 38345093 38345133 41 ATTTTCCATGAGAGAAAGCACACGGGGGAGAAACCCTATGA ATTTTCCATGAGAGAAAGCACACTGGGGAGAAACCCTATGA < 41bp 0.725085627491922 0.364158427284735 0.39852098 0.20829609 prediction 0.450171254983843 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38345113 chr10:38345116 synonymous SNV . 0 24 hm5C_associated_SNPs_78314 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:38345078-38345116
64251 chr10 38345115 38345115 1 + C T UCEC 38345113 + 38345093 38345133 41 ATTTTCCATGAGAGAAAGCACACGGGGGAGAAACCCTATGA ATTTTCCATGAGAGAAAGCACATGGGGGAGAAACCCTATGA < 41bp 0.725085627491922 0.481426477518452 0.39852098 0.50533515 prediction 0.450171254983843 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38345113 chr10:38345115 nonsynonymous SNV 0.856 3 23 hm5C_associated_SNPs_78315 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:38345078-38345116
64251 chr1 2520061 2520061 1 + A C STAD 2520057 + 2520037 2520077 41 AGCGGAGGGCTGCTGGTGGTCAGCAAAGGTGGGTCGAGGGA AGCGGAGGGCTGCTGGTGGTCAGCCAAGGTGGGTCGAGGGA < 41bp 0.930927745737611 0.705842897635837 0.54063004 0.35602805 prediction 0.450169696203548 Functional Loss - FAM213B ENSG00000157870 CDS Human protein_coding chr1:2520057 chr1:2520061 nonsynonymous SNV 0.929 4 25 hm5C_associated_SNPs_78316 0 0 2 DDX24 POSTAR2 ENCODE chr1:2520009-2520074
64251 chr5 176795163 176795163 1 + G A rs112465391 176795160 + 176795140 176795180 41 TCGCTCCCTCTTCACTAGAGCTGGGCGGGACTGCAAACGCC TCGCTCCCTCTTCACTAGAGCTGAGCGGGACTGCAAACGCC < 41bp 0.725084073684816 0.473148814745778 0.62890595 0.314431 prediction 0.450168147369633 Functional Loss - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176795160 chr5:176795163 nonsynonymous SNV 0.103 0 24 hm5C_associated_SNPs_78318 0 0 2 GEMIN5 POSTAR2 ENCODE chr5:176795139-176795222
64251 chr15 85182979 85182979 1 + G T rs374017454 85182976 + 85182956 85182996 41 CACTGGGGATACAAAGAAACCAAGATTTTTCTGGGAATTCT CACTGGGGATACAAAGAAACCAATATTTTTCTGGGAATTCT < 41bp 0.725082478993714 0.345695320242753 0.87156904 0.8705236 prediction 0.450164957987428 Functional Loss - SCAND2P ENSG00000176700 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:85182976 chr15:85182979 . . 0 24 hm5C_associated_SNPs_78321 0 0 1 RBM15 POSTAR2 ENCODE chr15:85182979-85183046
64251 chr11 65820161 65820161 1 + G A CHOL 65820158 + 65820138 65820178 41 CTGCAGGTAATCGCGAGGAGCTGGTGGAGCGGCTGCAGAGC CTGCAGGTAATCGCGAGGAGCTGATGGAGCGGCTGCAGAGC < 41bp 0.800306254645843 0.575224809913482 0.8787545 0.9012052 prediction 0.450162889464722 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65820158 chr11:65820161 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_78322 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65820146-65820178
64251 chr7 6193722 6193722 1 + C T rs200010499 6193720 + 6193700 6193740 41 ATCGCGGAGGGCCCGCGGGACTCGGCGTTGGCGGAAGCCCC ATCGCGGAGGGCCCGCGGGACTTGGCGTTGGCGGAAGCCCC < 41bp 0.725080961526152 0.464908253005082 0.5316857 0.3143835 prediction 0.450161923052305 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193720 chr7:6193722 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_78323 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:6193678-6193735
64251 chr5 6751223 6751223 1 + G A BLCA 6751220 + 6751200 6751240 41 CTGCAAGCGCCAGCTCCTCTCATGGCCGGCTTACCCACCGC CTGCAAGCGCCAGCTCCTCTCATAGCCGGCTTACCCACCGC < 41bp 0.795722443826251 0.570642207642107 0.88379705 0.73459435 prediction 0.450160472368286 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6751220 chr5:6751223 nonsynonymous SNV 0.753 0 24 hm5C_associated_SNPs_78324 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:6751212-6751239
64251 chrX 69563737 69563737 1 + G A KIRC 69563734 + 69563714 69563754 41 TTTGAATTTTCAGCTGCAAACTGGATCTTCAAAAGCTAGTG TTTGAATTTTCAGCTGCAAACTGAATCTTCAAAAGCTAGTG < 41bp 0.725075137497574 0.497564718455434 0.06223029 0.036021203 prediction 0.450150274995148 Functional Loss - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69563734 chrX:69563737 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_78327 0 0 1 FXR2 POSTAR2 ENCODE chrX:69563726-69563754
64251 chr2 239257977 239257977 1 + G A COAD 239257974 + 239257954 239257994 41 ATTTGGGTTTAGAAGAATTCCTCGGCCTGGGAGTGCAAGAC ATTTGGGTTTAGAAGAATTCCTCAGCCTGGGAGTGCAAGAC < 41bp 0.774310389047036 0.549237656399192 0.28843856 0.1546087 prediction 0.450145465295689 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239257974 chr2:239257977 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_78329 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:239257955-239257986
64251 chr9 135553705 135553705 1 + C T STAD 135553703 + 135553683 135553723 41 ATGAGGCCCCGGAAGGAAATCTCGGGGATTTTGCTGAGTTT ATGAGGCCCCGGAAGGAAATCTTGGGGATTTTGCTGAGTTT < 41bp 0.83824751780702 0.613187255716846 0.54830253 0.37890783 prediction 0.450120524180349 Functional Loss - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135553703 chr9:135553705 synonymous SNV . 0 23 hm5C_associated_SNPs_78338 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:135553698-135553720
64251 chr6 74201963 74201963 1 + C T PAAD 74201961 + 74201941 74201981 41 TTTCATATATTTGCAGAGCTCTCGATGTTCTGAAGTATGAG TTTCATATATTTGCAGAGCTCTTGATGTTCTGAAGTATGAG < 41bp 0.725059356521595 0.425614357716369 0.60501456 0.10981262 prediction 0.45011871304319 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74201961 chr6:74201963 synonymous SNV . 0 23 hm5C_associated_SNPs_78341 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:74201960-74201980
64251 chr8 22429919 22429919 1 + G A UCEC 22429916 + 22429896 22429936 41 CTGGAGCTGCGCGAGGGGGACAGGGTGGATGTCATGCAGCA CTGGAGCTGCGCGAGGGGGACAGAGTGGATGTCATGCAGCA < 41bp 0.781234178856447 0.556189644175544 0.8858679 0.8426265 prediction 0.450089069361806 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22429916 chr8:22429919 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_78351 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22429906-22429931
64251 chr8 94935896 94935896 1 + G T UCEC 94935893 + 94935873 94935913 41 TTGTAGGGGCGTATCAAAACCAAGAATAGTGAGTGGCTCTT TTGTAGGGGCGTATCAAAACCAATAATAGTGAGTGGCTCTT < 41bp 0.725040881762712 0.350033850718617 0.85055506 0.90567386 prediction 0.450081763525424 Functional Loss - PDP1 ENSG00000164951 CDS Human protein_coding chr8:94935893 chr8:94935896 stopgain 0.996 0 24 hm5C_associated_SNPs_78356 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:94935880-94935900
64251 chr12 34175543 34175543 1 + G C BLCA 34175539 + 34175519 34175559 41 GGCTGTGGGAGCTGGAATGGCGCAGCTGGAAGGTTACTATT GGCTGTGGGAGCTGGAATGGCGCACCTGGAAGGTTACTATT < 41bp 0.849941157672652 0.624905245311864 0.8824841 0.33107218 prediction 0.450071824721576 Functional Loss - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175539 chr12:34175543 nonsynonymous SNV 0.818 1 25 hm5C_associated_SNPs_78359 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:34175543-34175564
64251 chr8 90937709 90937709 1 + G T GBM 90937707 + 90937687 90937727 41 CACGCTGTTTAGCTACAAGACAGAAGAAAAAGCATTTGTTT CACGCTGTTTAGCTACAAGACATAAGAAAAAGCATTTGTTT < 41bp 0.725034748495597 0.394429518966409 0.22812918 0.036269754 prediction 0.450069496991194 Functional Loss - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937707 chr8:90937709 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_78361 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:90937693-90937714
64251 chr14 23235939 23235939 1 + G T LUSC 23235937 + 23235917 23235957 41 ATGGGACTAATGTGCGGACGCCGGGAGCTTCTGCGCTTGCT ATGGGACTAATGTGCGGACGCCTGGAGCTTCTGCGCTTGCT < 41bp 0.725033490764147 0.362268218657781 0.89526904 0.7955718 prediction 0.450066981528295 Functional Loss - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23235937 chr14:23235939 nonsynonymous SNV 0.014 0 23 hm5C_associated_SNPs_78362 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819210 chr14:23235900-23235940
64251 chr20 37400215 37400215 1 + C T UCEC 37400213 + 37400193 37400233 41 GTGTTTCAGGTTCAACTTGCCTCGAACCCTGTGCTGGATGC GTGTTTCAGGTTCAACTTGCCTTGAACCCTGTGCTGGATGC < 41bp 0.851012175136337 0.625979246055165 0.9002887 0.15531564 prediction 0.450065858162345 Functional Loss - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37400213 chr20:37400215 nonsynonymous SNV 0.941 0 23 hm5C_associated_SNPs_78363 0 0 1 BUD13 POSTAR2 ENCODE chr20:37400192-37400243
64251 chr16 20781367 20781367 1 + G A LGG 20781364 + 20781344 20781384 41 TCCAACAAGACTGATGCTAGCTCGTGTCACCAGGAAGATGC TCCAACAAGACTGATGCTAGCTCATGTCACCAGGAAGATGC < 41bp 0.737684194414169 0.512665678437403 0.08580133 0.062255472 prediction 0.450037031953531 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20781364 chr16:20781367 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_78370 0 0 6 DDX3X POSTAR2 ENCODE chr16:20781352-20781478
64251 chr19 10823857 10823857 1 + G A UCEC 10823854 + 10823834 10823874 41 AGCGCTTCCCGGACTTCGTGCGGGACTTCATGGGCGCCATG AGCGCTTCCCGGACTTCGTGCGGAACTTCATGGGCGCCATG < 41bp 0.80107302964427 0.576062489879397 0.92128336 0.8911466 prediction 0.450021079529747 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823854 chr19:10823857 nonsynonymous SNV 0.613 0 24 hm5C_associated_SNPs_78376 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:10823849-10823875
64251 chr16 88780820 88780820 1 + G A rs61730419 88780817 + 88780797 88780837 41 TGAGAAGCTGGTGAAGGGCCCCCGGGATGGCCCTGCTGCTG TGAGAAGCTGGTGAAGGGCCCCCAGGATGGCCCTGCTGCTG < 41bp 0.725010143717769 0.471568630055612 0.2495569 0.10814062 prediction 0.450020287435537 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780817 chr16:88780820 nonsynonymous SNV 0.021 1 24 hm5C_associated_SNPs_78377 0 0 2 PUM2 POSTAR2 ENCODE chr16:88780788-88780822
64251 chr22 21224644 21224644 1 + G C BLCA 21224640 + 21224620 21224660 41 CCCAGGAGCTCGCCCGTCAGCGAGGAGTCCTGGAGCGCACA CCCAGGAGCTCGCCCGTCAGCGAGCAGTCCTGGAGCGCACA < 41bp 0.866502825826802 0.641492808152608 0.9027916 0.7121836 prediction 0.450020035348388 Functional Loss - SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21224640 chr22:21224644 nonsynonymous SNV 0.987 2 25 hm5C_associated_SNPs_78378 0 0 2 FMR1 POSTAR2 ENCODE chr22:21224624-21224660
64251 chr11 123471203 123471203 1 + G A SKCM 123471200 + 123471180 123471220 41 TCTTCACTTCGTTTGGGGCCCGGGATAGGACATATATGATG TCTTCACTTCGTTTGGGGCCCGGAATAGGACATATATGATG < 41bp 0.76171213568421 0.536702522752974 0.39957586 0.24282229 prediction 0.450019225862471 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123471200 chr11:123471203 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_78379 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:123471200-123471220
64251 chr1 26801131 26801131 1 + A T LUSC 26801127 + 26801107 26801147 41 TGGCAAGGAGGGGAATAACCCTGCAGAAAATGGAGATGCCA TGGCAAGGAGGGGAATAACCCTGCTGAAAATGGAGATGCCA < 41bp 0.897065329555748 0.672061806422298 0.40023687 0.70007885 prediction 0.450007046266901 Functional Loss - HMGN2 ENSG00000198830 CDS Human protein_coding chr1:26801127 chr1:26801131 synonymous SNV . 0 25 hm5C_associated_SNPs_78385 0 0 1 UCHL5 POSTAR2 ENCODE chr1:26801101-26801158
64251 chr12 25260968 25260968 1 + C T rs146082101 25260965 + 25260945 25260985 41 TCTTGTGGCCATTTACCAGACTCCGACACAATGGGCCACCA TCTTGTGGCCATTTACCAGACTCTGACACAATGGGCCACCA < 41bp 0.745160748653953 0.520163021005173 0.089800894 0.09550315 prediction 0.449995455297561 Functional Loss - LRMP ENSG00000118308 CDS Human protein_coding chr12:25260965 chr12:25260968 stopgain 0.989 0 24 hm5C_associated_SNPs_78387 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:25260938-25260969
64251 chr10 60562922 60562922 1 + G A COAD 60562919 + 60562899 60562939 41 AGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCA AGAAGGCTCCAGGGAGTGAGCGCACTGCAGAGAGGGCAGCA < 41bp 0.777497817823272 0.552519913901365 0.46522206 0.36541396 prediction 0.449955807843814 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60562919 chr10:60562922 nonsynonymous SNV 0.982 4 24 hm5C_associated_SNPs_78397 0 0 3 LIN28B POSTAR2 GSE44616,GSM1087851 chr10:60562880-60562960
64251 chr19 35655077 35655077 1 + C T HNSC 35655075 + 35655055 35655095 41 TCAGCTCATCCCACTGATGACACCACGACGCTCTCTGAGAG TCAGCTCATCCCACTGATGACATCACGACGCTCTCTGAGAG < 41bp 0.724971780127648 0.449967298006782 0.042939484 0.048955113 prediction 0.449943560255296 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35655075 chr19:35655077 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_78400 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35655058-35655081
64251 chr9 130868675 130868675 1 + C T BRCA 130868673 + 130868653 130868693 41 CTGCGGAAGACAGGCCAGTACTCAGGAATGCTGGACTGCGC CTGCGGAAGACAGGCCAGTACTTAGGAATGCTGGACTGCGC < 41bp 0.724970851670354 0.43786490571946 0.56323814 0.22120789 prediction 0.449941703340707 Functional Loss - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868673 chr9:130868675 nonsynonymous SNV 0.957 0 23 hm5C_associated_SNPs_78402 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr9:130868675-130868696
64251 chr12 57911098 57911098 1 - G A SKCM 57911101 - 57911081 57911121 41 GGACCTGCAAGAGGTCCTGTCTTCAGATGAAAATGGGGGTA GGACCTGCAAGAGGTCCTGTCTTTAGATGAAAATGGGGGTA < 41bp 0.738814791338458 0.51384617266014 0.37012377 0.12961456 prediction 0.449937237356637 Functional Loss - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911101 chr12:57911098 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_78404 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:57911056-57911100
64251 chr2 97476736 97476736 1 + C T rs10172803 97476734 + 97476714 97476754 41 GGGTGCAGCAGGAGCTGGGTCCCGAGAGCCTGGCAGGTGAA GGGTGCAGCAGGAGCTGGGTCCTGAGAGCCTGGCAGGTGAA < 41bp 0.732894616500728 0.507926309290174 0.6519598 0.6603699 prediction 0.449936614421107 Functional Loss - CNNM4 ENSG00000158158 UTR3 Human protein_coding chr2:97476734 chr2:97476736 . . 0 23 hm5C_associated_SNPs_78405 1 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:97476710-97476739
64251 chr7 155538159 155538159 1 + C T UCEC 155538157 + 155538137 155538177 41 GCCAGCTGTCCCCCAGACTCCTCGAGTGGCGTCCATCCAGG GCCAGCTGTCCCCCAGACTCCTTGAGTGGCGTCCATCCAGG < 41bp 0.846863393723551 0.621906799733712 0.80405045 0.19014618 prediction 0.449913187979679 Functional Loss - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155538157 chr7:155538159 stopgain 0.003 1 23 hm5C_associated_SNPs_78408 0 0 6 GRWD1 POSTAR2 ENCODE chr7:155538054-155538182
64251 chr3 119217606 119217606 1 + G A COAD 119217603 + 119217583 119217623 41 GGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTCTGTAGAG GGAGGTGCCGCCACCGGCACCGCAGAGCTTTCTCTGTAGAG < 41bp 0.79719847032686 0.572244447207156 0.85587865 0.29917097 prediction 0.449908046239407 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119217603 chr3:119217606 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_78410 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:119217552-119217694
64251 chr19 3114975 3114975 1 + G A SKCM 3114972 + 3114952 3114992 41 GACGTTGACCGCATCGCCACCTTGGGCTACCTGCCCACCCA GACGTTGACCGCATCGCCACCTTAGGCTACCTGCCCACCCA < 41bp 0.724950903593388 0.477770762474999 0.53260726 0.16952014 prediction 0.449901807186776 Functional Loss - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3114972 chr19:3114975 synonymous SNV . 0 24 hm5C_associated_SNPs_78411 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:3114945-3114980
64251 chr12 6948605 6948605 1 + C T COAD 6948603 + 6948583 6948623 41 AGACAAGACTGGAAGGGCACCTCGGGTTCGGGAGGAGCTGT AGACAAGACTGGAAGGGCACCTTGGGTTCGGGAGGAGCTGT < 41bp 0.798564945848343 0.573615542014321 0.25324452 0.10835689 prediction 0.449898807668045 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6948603 chr12:6948605 nonsynonymous SNV 0.598 1 23 hm5C_associated_SNPs_78412 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:6948604-6948618
64251 chr5 145608539 145608539 1 + G A CESC 145608536 + 145608516 145608556 41 AGGAGCCAGCAGAGGAAGAACGAGATGGCAGAAAAAAGAAA AGGAGCCAGCAGAGGAAGAACGAAATGGCAGAAAAAAGAAA < 41bp 0.730378570029424 0.505431129513378 0.7471009 0.41304004 prediction 0.449894881032093 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145608536 chr5:145608539 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_78413 0 0 4 BUD13 POSTAR2 ENCODE chr5:145608509-145608556
64251 chr6 26217307 26217307 1 + C T LUSC 26217305 + 26217285 26217325 41 TTGGCCGTGTGCACCGCCTCCTCCGCAAAGGCAACTACTCC TTGGCCGTGTGCACCGCCTCCTTCGCAAAGGCAACTACTCC < 41bp 0.767925668800253 0.542978919808896 0.043697357 0.07559833 prediction 0.449893497982714 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217305 chr6:26217307 synonymous SNV . 0 23 hm5C_associated_SNPs_78414 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26217287-26217314
64251 chr3 49452431 49452431 1 + G C rs79105338 49452427 + 49452407 49452447 41 CAGGGAGTACCCAGTGCCTACAGGGCTGGGCCTCTTCTGCC CAGGGAGTACCCAGTGCCTACAGGCCTGGGCCTCTTCTGCC < 41bp 0.865597536477055 0.640653628736276 0.8398458 0.527668 prediction 0.449887815481558 Functional Loss - TCTA ENSG00000145022 UTR3 Human protein_coding chr3:49452427 chr3:49452431 . . 0 25 hm5C_associated_SNPs_78416 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:49452429-49452454
64251 chr1 231475598 231475598 1 + G T UCEC 231475595 + 231475575 231475615 41 ACCCCTTTTGAAGTTGAGGCCAAGAAAGGATCTTGTAGAGG ACCCCTTTTGAAGTTGAGGCCAATAAAGGATCTTGTAGAGG < 41bp 0.724928313643219 0.334501576881083 0.11707169 0.04827407 prediction 0.449856627286437 Functional Loss - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231475595 chr1:231475598 nonsynonymous SNV 0.917 3 24 hm5C_associated_SNPs_78424 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231475524-231475598
64251 chr8 33357867 33357867 1 + G T SARC 33357865 + 33357845 33357885 41 CCTTTACCCGTCCTTGAGAACAGCGGTCCAGGAGAATCAGG CCTTTACCCGTCCTTGAGAACATCGGTCCAGGAGAATCAGG < 41bp 0.875562603362584 0.650638888501216 0.49363166 0.22567123 prediction 0.449847429722737 Functional Loss - TTI2 ENSG00000129696 CDS Human protein_coding chr8:33357865 chr8:33357867 synonymous SNV . 0 23 hm5C_associated_SNPs_78427 0 0 11 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:33357840-33357880
64251 chr12 104337594 104337594 1 + A C LUSC 104337593 + 104337573 104337613 41 AGCCAGTACGGATGGTCTGGCAACATGGAGAGAATCATGAA AGCCAGTACGGATGGTCTGGCCACATGGAGAGAATCATGAA < 41bp 0.724917517663908 0.470333982606141 0.46485555 0.64031935 prediction 0.449835035327816 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104337593 chr12:104337594 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_78430 0 0 30 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:104337553-104337617
64251 chr7 129767252 129767252 1 + G T LUSC 129767250 + 129767230 129767270 41 TGTGTGTTTGGCAGGCTTTCCTGCAGCCCGAAGGTGTCACA TGTGTGTTTGGCAGGCTTTCCTTCAGCCCGAAGGTGTCACA < 41bp 0.724914104231337 0.386129623875646 0.47684535 0.122335285 prediction 0.449828208462675 Functional Loss - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129767250 chr7:129767252 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_78434 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr7:129767233-129767265
64251 chr19 57723710 57723710 1 + G A STAD 57723707 + 57723687 57723727 41 TTCAACCACCGATCCTACCTCAAGAGGCACCAGCGGATTCA TTCAACCACCGATCCTACCTCAAAAGGCACCAGCGGATTCA < 41bp 0.779176535771002 0.55426491827179 0.84694785 0.41637442 prediction 0.449823234998423 Functional Loss - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57723707 chr19:57723710 synonymous SNV . 0 24 hm5C_associated_SNPs_78435 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:57723693-57723722
64251 chr9 34241424 34241424 1 + G A CESC 34241421 + 34241401 34241441 41 CAACAGCATCCTCACACCAACTCGGGTCAGCAGTAGTGCCA CAACAGCATCCTCACACCAACTCAGGTCAGCAGTAGTGCCA < 41bp 0.76084398617772 0.535937241075223 0.25821653 0.22994995 prediction 0.449813490204993 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241421 chr9:34241424 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_78441 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr9:34241420-34241440
64251 chr9 96323466 96323466 1 + G T LUAD 96323464 + 96323444 96323484 41 GTTGGCCATTGGGCTGGGAGCAGGCGGGGCCGTGGGGGCCG GTTGGCCATTGGGCTGGGAGCATGCGGGGCCGTGGGGGCCG < 41bp 0.906981841528834 0.682076288124266 0.91380644 0.8942498 prediction 0.449811106809137 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96323464 chr9:96323466 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_78443 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr9:96323429-96323475
64251 chr7 89856300 89856300 1 + A T UCEC 89856296 + 89856276 89856316 41 TTTCCACAGGTTTATATATGCAGCAACAATATTCAAGCGCG TTTCCACAGGTTTATATATGCAGCTACAATATTCAAGCGCG < 41bp 0.724888940586679 0.412016339049707 0.14531234 0.19665992 prediction 0.449777881173357 Functional Loss - STEAP2 ENSG00000157214 CDS Human protein_coding chr7:89856296 chr7:89856300 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_78454 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:89856280-89856300
64251 chrX 65414978 65414978 1 + G A BLCA 65414975 + 65414955 65414995 41 CTGAGGTGGGTGACACCATTCAGGTGGTCTTCTACAACCGT CTGAGGTGGGTGACACCATTCAGATGGTCTTCTACAACCGT < 41bp 0.724887392364779 0.474530788317644 0.5613872 0.38038695 prediction 0.449774784729557 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65414975 chrX:65414978 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_78455 0 0 4 BUD13 POSTAR2 ENCODE chrX:65414926-65414985
64251 chr10 104679282 104679282 1 + A C LUSC 104679281 + 104679261 104679301 41 CTCGTGGCCGTGGTAGTCTCCACCATCGGTATCGTCATCTT CTCGTGGCCGTGGTAGTCTCCCCCATCGGTATCGTCATCTT < 41bp 0.787902902887793 0.563023397658476 0.08693007 0.1099689 prediction 0.449759010458634 Functional Loss - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679281 chr10:104679282 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_78460 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr10:104679264-104679294
64251 chr19 1924168 1924168 1 + C T rs200769074 1924166 + 1924146 1924186 41 AAGGCACAGACGGAGTGGAACACGGGCACTTGGCGGAACCC AAGGCACAGACGGAGTGGAACATGGGCACTTGGCGGAACCC < 41bp 0.790671086175931 0.565800185051634 0.31688738 0.16529855 prediction 0.449741802248594 Functional Loss - SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1924166 chr19:1924168 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_78465 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1924119-1924185
64251 chr19 52786596 52786596 1 + G A UCEC 52786593 + 52786573 52786613 41 ATGAAGCAAAGGACAGAGCCCTGGACTGTGGAGAATGAAAT ATGAAGCAAAGGACAGAGCCCTGAACTGTGGAGAATGAAAT < 41bp 0.731317799645727 0.506448085690931 0.03144729 0.023276716 prediction 0.449739427909593 Functional Loss - ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52786593 chr19:52786596 stopgain 0.648 0 24 hm5C_associated_SNPs_78466 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:52786579-52786619
64251 chr17 8167651 8167651 1 + G A LGG 8167648 + 8167628 8167668 41 ATGGGTGCTGGGCAAGATGCCTCGGAAGGTATGTGGGGTTG ATGGGTGCTGGGCAAGATGCCTCAGAAGGTATGTGGGGTTG < 41bp 0.788851726099905 0.563982928242839 0.31821853 0.13546339 prediction 0.449737595714131 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8167648 chr17:8167651 nonsynonymous SNV 0.914 0 24 hm5C_associated_SNPs_78468 0 0 2 PPIG POSTAR2 ENCODE chr17:8167602-8167656
64251 chr11 32615446 32615446 1 + G A GBM 32615443 + 32615423 32615463 41 CAAAAGTCATGGTGGAATTGCTCGGAAGTTACACAGAGGAC CAAAAGTCATGGTGGAATTGCTCAGAAGTTACACAGAGGAC < 41bp 0.77888245377895 0.5540171780558 0.090634525 0.04457584 prediction 0.4497305514463 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32615443 chr11:32615446 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_78472 0 0 29 EIF3B POSTAR2 GSE65004,GSM1585668 chr11:32615421-32615447
64251 chr7 128509224 128509224 1 + C T rs3736612 128509222 + 128509202 128509242 41 TTGCCCGCCCCTCACCTGGCCCCGAGGGCCCGCAGCCGCTC TTGCCCGCCCCTCACCTGGCCCTGAGGGCCCGCAGCCGCTC < 41bp 0.754430942396057 0.529566688074432 0.059955865 0.04691881 prediction 0.449728508643252 Functional Loss - LOC100130705 ENSG00000135253 ncRNA_intronic Human protein_coding chr7:128509222 chr7:128509224 . . 0 23 hm5C_associated_SNPs_78473 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:128509202-128509278
64251 chr9 124546734 124546734 1 + C T rs115662058 124546732 + 124546712 124546752 41 CCGGGGCCTGGACAGGCGGGCTCGGAGGCTACCCGCTGTGG CCGGGGCCTGGACAGGCGGGCTTGGAGGCTACCCGCTGTGG < 41bp 0.747274054389427 0.522412414425223 0.8265607 0.7776439 prediction 0.449723279928407 Functional Loss - DAB2IP ENSG00000136848 UTR3 Human protein_coding chr9:124546732 chr9:124546734 . . 0 23 hm5C_associated_SNPs_78476 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:124546733-124546734
64251 chr10 99510205 99510205 1 + C T COAD 99510203 + 99510183 99510223 41 AAGGATGGTCTGATGGACAGCACGCCTGCCCTCACACCCAC AAGGATGGTCTGATGGACAGCATGCCTGCCCTCACACCCAC < 41bp 0.724849636676517 0.483777693562611 0.20177162 0.1809695 prediction 0.449699273353035 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99510203 chr10:99510205 nonsynonymous SNV 0.476 4 23 hm5C_associated_SNPs_78481 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:99510186-99510222
64251 chr10 99510206 99510206 1 + G A UCEC 99510203 + 99510183 99510223 41 AAGGATGGTCTGATGGACAGCACGCCTGCCCTCACACCCAC AAGGATGGTCTGATGGACAGCACACCTGCCCTCACACCCAC < 41bp 0.724849636676517 0.486612968456536 0.20177162 0.17895475 prediction 0.449699273353035 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99510203 chr10:99510206 synonymous SNV . 0 24 hm5C_associated_SNPs_78482 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:99510186-99510222
64251 chr16 28911961 28911961 1 + G A LUSC 28911958 + 28911938 28911978 41 GACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGCTGTG GACCCTCCGCGCAAGGAGGTCACAGGCTCCATCCAGCTGTG < 41bp 0.797104442762797 0.572260786822812 0.39467517 0.23648378 prediction 0.44968731187997 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28911958 chr16:28911961 synonymous SNV . 0 24 hm5C_associated_SNPs_78486 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28911958-28911996
64251 chr20 57598005 57598005 1 + T C UCEC 57598004 + 57597984 57598024 41 AGCGTGTACTACAACGAAGCCTACGGTAGGACTGGCGGGGC AGCGTGTACTACAACGAAGCCCACGGTAGGACTGGCGGGGC < 41bp 0.800308294231874 0.575467277872318 0.35003245 0.44719154 prediction 0.449682032719111 Functional Loss - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57598004 chr20:57598005 nonsynonymous SNV 0.931 0 22 hm5C_associated_SNPs_78488 0 0 2 BUD13 POSTAR2 ENCODE chr20:57597897-57598034
64251 chr10 6263397 6263397 1 + C T UCEC 6263395 + 6263375 6263415 41 AGCAGAACCTGAAGGACCTGCGCGTGTGGACCAGCCAGCTG AGCAGAACCTGAAGGACCTGCGTGTGTGGACCAGCCAGCTG < 41bp 0.724840101753525 0.460324231880781 0.42211744 0.38071632 prediction 0.449680203507051 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6263395 chr10:6263397 synonymous SNV . 0 23 hm5C_associated_SNPs_78489 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr10:6263379-6263402
64251 chr3 52828887 52828887 1 + C T rs528961799 52828885 + 52828865 52828905 41 AGCTTGGCAGCCTCTGGCTTCCCGAGAAGCCCCTTTCGGCT AGCTTGGCAGCCTCTGGCTTCCTGAGAAGCCCCTTTCGGCT < 41bp 0.724824869273691 0.485361347421893 0.31102622 0.42265633 prediction 0.449649738547383 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52828885 chr3:52828887 nonsynonymous SNV 0.143 0 23 hm5C_associated_SNPs_78502 0 0 3 DDX3X POSTAR2 ENCODE chr3:52828842-52828913
64251 chr12 10339039 10339039 1 + C T READ 10339037 + 10339017 10339057 41 AGGTTGCTAGTGGTAATTGGCGCGCTGCTTCTCCTGTGTGG AGGTTGCTAGTGGTAATTGGCGTGCTGCTTCTCCTGTGTGG < 41bp 0.816479674309371 0.591656920198569 0.35160547 0.4680079 prediction 0.449645508221604 Functional Loss - TMEM52B ENSG00000165685 CDS Human protein_coding chr12:10339037 chr12:10339039 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_78504 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163975 chr12:10339039-10339040
64251 chr10 25312524 25312524 1 + A T BLCA 25312520 + 25312500 25312540 41 AAAAGCTGTGTTAAACTTCTCTGCATCTGGAAGTGTGATTT AAAAGCTGTGTTAAACTTCTCTGCTTCTGGAAGTGTGATTT < 41bp 0.724819598618144 0.389608734602772 0.08228949 0.08271581 prediction 0.449639197236287 Functional Loss - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312520 chr10:25312524 synonymous SNV . 0 25 hm5C_associated_SNPs_78507 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr10:25312501-25312531
64251 chr2 71299832 71299832 1 + C T LUAD 71299829 + 71299809 71299849 41 AGGCTCATCAACCCTGATGGCTCCGAGAGTGGCTGCGGCGG AGGCTCATCAACCCTGATGGCTCTGAGAGTGGCTGCGGCGG < 41bp 0.727131857997807 0.5023144045574 0.3213134 0.19815686 prediction 0.449634906880816 Functional Loss - NAGK ENSG00000124357 CDS Human protein_coding chr2:71299829 chr2:71299832 synonymous SNV . 0 24 hm5C_associated_SNPs_78508 0 0 2 BUD13 POSTAR2 ENCODE chr2:71299720-71299965
64251 chr8 125498395 125498395 1 + G T UCEC 125498393 + 125498373 125498413 41 TCCTGTAATAGGCTTAATCACAGAGCTACCATTACACATCA TCCTGTAATAGGCTTAATCACATAGCTACCATTACACATCA < 41bp 0.724817377073691 0.39465182654517 0.84537935 0.17320374 prediction 0.449634754147381 Functional Loss - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125498393 chr8:125498395 stopgain 1.000 1 23 hm5C_associated_SNPs_78509 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:125498371-125498429
64251 chrX 46322662 46322662 1 + T C GBM 46322661 + 46322641 46322681 41 GTTGCGAAGCCAGATGTGATCTTCAGGTTGGGACCAGGTGA GTTGCGAAGCCAGATGTGATCCTCAGGTTGGGACCAGGTGA < 41bp 0.792467717233655 0.567651319667107 0.15260097 0.0267497 prediction 0.449632795133097 Functional Loss - KRBOX4 ENSG00000147121 CDS Human protein_coding chrX:46322661 chrX:46322662 nonsynonymous SNV 0.973 0 22 hm5C_associated_SNPs_78511 0 0 3 GRWD1 POSTAR2 ENCODE chrX:46322647-46322742
64251 chr19 17534606 17534606 1 + C T ESCA 17534604 + 17534584 17534624 41 GCCTCCAGCCTCTATGGCATCTCAGGTGAGCACAGAGTGGG GCCTCCAGCCTCTATGGCATCTTAGGTGAGCACAGAGTGGG < 41bp 0.724805748705477 0.449173265796116 0.5052556 0.2700721 prediction 0.449611497410954 Functional Loss - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17534604 chr19:17534606 stopgain 0.999 4 23 hm5C_associated_SNPs_78515 0 0 1 PRPF8 POSTAR2 ENCODE chr19:17534602-17534648
64251 chr12 64173754 64173754 1 + G T LUAD 64173751 + 64173731 64173771 41 CCCGAGTGGGATGCGGCTGACGCGGAAGCGGCTCTGCTCGT CCCGAGTGGGATGCGGCTGACGCTGAAGCGGCTCTGCTCGT < 41bp 0.926012170602617 0.701207688773218 0.90032053 0.19871292 prediction 0.449608963658798 Functional Loss - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64173751 chr12:64173754 nonsynonymous SNV 0.923 0 24 hm5C_associated_SNPs_78516 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:64173749-64173775
64251 chr19 30103069 30103069 1 + C T rs142203789 30103067 + 30103047 30103087 41 AGCTCTTAAAGGCAGATCTTCACGGGGCTATTATTTCAGGT AGCTCTTAAAGGCAGATCTTCATGGGGCTATTATTTCAGGT < 41bp 0.724803346018102 0.44778951617286 0.5981637 0.52477646 prediction 0.449606692036204 Functional Loss - POP4 ENSG00000105171 CDS Human protein_coding chr19:30103067 chr19:30103069 synonymous SNV . 0 23 hm5C_associated_SNPs_78518 0 0 15 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:30103027-30103084
64251 chr15 99250976 99250976 1 + G A BLCA 99250973 + 99250953 99250993 41 TGCTGTTCCGAGTGGCTGGCCTCGAGAGCCTCGGAGACCTC TGCTGTTCCGAGTGGCTGGCCTCAAGAGCCTCGGAGACCTC < 41bp 0.760390253003249 0.535591061462145 0.5373451 0.16484192 prediction 0.449598383082206 Functional Loss - IGF1R ENSG00000140443 CDS Human protein_coding chr15:99250973 chr15:99250976 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_78521 0 0 1 DDX3X POSTAR2 ENCODE chr15:99250947-99250999
64251 chr10 76910316 76910316 1 + C T rs151328415 76910314 + 76910294 76910334 41 GTCCTAATCAACTCTGCATTCGCCGCTGGACTACCAAGCAT GTCCTAATCAACTCTGCATTCGTCGCTGGACTACCAAGCAT < 41bp 0.838923615663732 0.614135769193958 0.07022244 0.06771734 prediction 0.449575692939549 Functional Loss - SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76910314 chr10:76910316 synonymous SNV . 0 23 hm5C_associated_SNPs_78530 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr10:76910295-76910363
64251 chr19 50549313 50549313 1 + C T UCEC 50549311 + 50549291 50549331 41 AAGTGCCACGAGAGTGTTCACGCCAGAGAAAAACAAGGATT AAGTGCCACGAGAGTGTTCACGTCAGAGAAAAACAAGGATT < 41bp 0.832515923513198 0.607734530420198 0.28627878 0.16154242 prediction 0.449562786185999 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549311 chr19:50549313 nonsynonymous SNV 0.039 0 23 hm5C_associated_SNPs_78532 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50549301-50549319
64251 chr16 31089893 31089893 1 + G A LUSC 31089890 + 31089870 31089910 41 AGAGGGATGAGACCCATTTCCAGGGTGATAAAGAGAGCGGA AGAGGGATGAGACCCATTTCCAGAGTGATAAAGAGAGCGGA < 41bp 0.781620775867886 0.556846528364847 0.9065035 0.7937943 prediction 0.449548495006078 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089890 chr16:31089893 nonsynonymous SNV 0.858 0 24 hm5C_associated_SNPs_78538 0 0 1 SLTM POSTAR2 ENCODE chr16:31089876-31089922
64251 chr15 40318222 40318222 1 + G T STAD 40318220 + 40318200 40318240 41 GGCAGACAGAGAAGCGTGTGCTGGAGACTGAACTTGTGGAC GGCAGACAGAGAAGCGTGTGCTTGAGACTGAACTTGTGGAC < 41bp 0.724769944371766 0.423192970814988 0.9040681 0.414001 prediction 0.449539888743532 Functional Loss - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40318220 chr15:40318222 synonymous SNV . 0 23 hm5C_associated_SNPs_78541 0 0 6 GRWD1 POSTAR2 ENCODE chr15:40318182-40318285
64251 chr15 42127204 42127204 1 + G T UCEC 42127201 + 42127181 42127221 41 TCCACAGAGGTGAGTGTGGCCGTGACCCCAGATGGTTACGC TCCACAGAGGTGAGTGTGGCCGTTACCCCAGATGGTTACGC < 41bp 0.724767263697033 0.332132483902718 0.502774 0.34740043 prediction 0.449534527394065 Functional Loss - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127201 chr15:42127204 synonymous SNV . 0 24 hm5C_associated_SNPs_78543 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:42127187-42127211
64251 chr16 19710916 19710916 1 + C T UCEC 19710913 + 19710893 19710933 41 AACAACAAGCTCAACCAGCTCTCCGTCAACCTGTGGCACCT AACAACAAGCTCAACCAGCTCTCTGTCAACCTGTGGCACCT < 41bp 0.724764830690159 0.490879450584509 0.076004714 0.08782941 prediction 0.449529661380317 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19710913 chr16:19710916 synonymous SNV . 0 24 hm5C_associated_SNPs_78544 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:19710885-19710923
64251 chr7 98249013 98249013 1 + T C UCEC 98249012 + 98248992 98249032 41 CCGGCGACTTCCGCGAGGTGCTCCAGCAGCGGCTGGGGGAG CCGGCGACTTCCGCGAGGTGCCCCAGCAGCGGCTGGGGGAG < 41bp 0.833637352368456 0.608878205027388 0.9293753 0.3344621 prediction 0.449518294682136 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98249012 chr7:98249013 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_78546 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:98249006-98249054
64251 chr2 220045847 220045847 1 + G A STAD 220045844 + 220045824 220045864 41 GCTGATCCAGAGGATGTACACTCGCCTGGAGCCCCTGCTCA GCTGATCCAGAGGATGTACACTCACCTGGAGCCCCTGCTCA < 41bp 0.79062744929598 0.565873189371707 0.16287646 0.047273427 prediction 0.449508519848546 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220045844 chr2:220045847 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_78548 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:220045818-220045856
64251 chr2 192542965 192542965 1 + C T rs541440668 192542963 + 192542943 192542983 41 CGGGACAGGCTGGGCGCGCGCCCGTGTGAGTGAGCGGGACT CGGGACAGGCTGGGCGCGCGCCTGTGTGAGTGAGCGGGACT < 41bp 0.746993077414678 0.522243091054956 0.4313766 0.42318732 prediction 0.449499972719442 Functional Loss - NABP1 ENSG00000173559 UTR5 Human protein_coding chr2:192542963 chr2:192542965 . . 0 23 hm5C_associated_SNPs_78550 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr2:192542960-192542980
64251 chrX 51640147 51640147 1 + C T COAD 51640145 + 51640125 51640165 41 GAACCCAGGTGCTGCACAGCCCCGAGATGTGGCCCTTCTTC GAACCCAGGTGCTGCACAGCCCTGAGATGTGGCCCTTCTTC < 41bp 0.850762387338375 0.626013303421738 0.29572108 0.3294616 prediction 0.449498167833274 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640145 chrX:51640147 stopgain 0.999 0 23 hm5C_associated_SNPs_78552 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:51640125-51640176
64251 chr19 50172182 50172182 1 + C T SKCM 50172180 + 50172160 50172200 41 GGTCCAAGAGCAGCTGAAATCTCCGCCCAGCCCAGGTGAGG GGTCCAAGAGCAGCTGAAATCTTCGCCCAGCCCAGGTGAGG < 41bp 0.79849284551707 0.573744038861936 0.69467413 0.48208788 prediction 0.449497613310267 Functional Loss - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50172180 chr19:50172182 nonsynonymous SNV 0.827 4 23 hm5C_associated_SNPs_78553 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr19:50172159-50172189
64251 chrX 47060918 47060918 1 + C T rs193168226 47060916 + 47060896 47060936 41 CCTGCCTGGATGAGGCCCGACACGGGTTTGAGAGCGGGGAC CCTGCCTGGATGAGGCCCGACATGGGTTTGAGAGCGGGGAC < 41bp 0.840934975335095 0.616189735198935 0.06530535 0.10129398 prediction 0.449490480272322 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47060916 chrX:47060918 synonymous SNV . 0 23 hm5C_associated_SNPs_78554 1 0 17 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:47060900-47060920
64251 chrX 47058305 47058305 1 + C T UCEC 47058303 + 47058283 47058323 41 TCCGTGTTGTCCGAAGTGCCCTCGGTGCCAACCAACGTGAG TCCGTGTTGTCCGAAGTGCCCTTGGTGCCAACCAACGTGAG < 41bp 0.82441162732025 0.599676582846998 0.16092017 0.12134081 prediction 0.449470088946505 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058303 chrX:47058305 nonsynonymous SNV 0.992 0 23 hm5C_associated_SNPs_78559 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:47058266-47058309
64251 chr19 44611668 44611668 1 + G T OV 44611665 + 44611645 44611685 41 CTTTCACCAGCGCGTCCATACAGGAGAGAAACTGTATAATT CTTTCACCAGCGCGTCCATACAGTAGAGAAACTGTATAATT < 41bp 0.926057547697356 0.701323265749642 0.17507881 0.019991845 prediction 0.449468563895428 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611665 chr19:44611668 nonsynonymous SNV 0.179 3 24 hm5C_associated_SNPs_78560 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr19:44611667-44611686
64251 chr20 34206899 34206899 1 + G A GBM 34206896 + 34206876 34206916 41 ATGAGGATTTTGTGCGGAAGCCCGACTATGCTTTGAGCTCT ATGAGGATTTTGTGCGGAAGCCCAACTATGCTTTGAGCTCT < 41bp 0.752835226294188 0.52810462686797 0.17896155 0.30117238 prediction 0.449461198852435 Functional Loss - SPAG4 ENSG00000061656 CDS Human protein_coding chr20:34206896 chr20:34206899 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_78563 0 0 2 NOL12 POSTAR2 ENCODE chr20:34206899-34206924
64251 chr22 50962224 50962224 1 + C T UCEC 50962222 + 50962202 50962242 41 GGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCT GGGGCCTGCATTGTAGTACACGTGGTAACTGTGACTAGCCT < 41bp 0.803037802116026 0.578312591764568 0.37822384 0.5798601 prediction 0.449450420702916 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962222 chr22:50962224 nonsynonymous SNV 0.547 5 23 hm5C_associated_SNPs_78565 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50962198-50962249
64251 chr7 134849404 134849404 1 + G A BLCA 134849401 + 134849381 134849421 41 AGTGTCACCAGTTCCCTGAGCTGGAAGCCCTGGGGGTGCCT AGTGTCACCAGTTCCCTGAGCTGAAAGCCCTGGGGGTGCCT < 41bp 0.744537773170027 0.519813674363193 0.55513406 0.34415457 prediction 0.449448197613669 Functional Loss - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849401 chr7:134849404 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_78567 0 0 1 RPS3 POSTAR2 ENCODE chr7:134849402-134849462
64251 chr12 58112151 58112151 1 + C T SKCM 58112148 + 58112128 58112168 41 TTCCGTCAGACCGAGACCGGCTCCGTTCGGAGGTGAAGGCT TTCCGTCAGACCGAGACCGGCTCTGTTCGGAGGTGAAGGCT < 41bp 0.74756997129787 0.522854516332084 0.052155018 0.044587135 prediction 0.449430909931573 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58112148 chr12:58112151 nonsynonymous SNV 0.967 3 24 hm5C_associated_SNPs_78572 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:58112140-58112160
64251 chr20 55983731 55983731 1 + G A rs188223169 55983728 + 55983708 55983748 41 TAATAAAGTGTCTGCCGGCTCGCGGGCCAGGATCCTCTCGG TAATAAAGTGTCTGCCGGCTCGCAGGCCAGGATCCTCTCGG < 41bp 0.760006863679657 0.53529339710893 0.9007312 0.2696879 prediction 0.449426933141453 Functional Loss - RBM38 ENSG00000132819 UTR3 Human protein_coding chr20:55983728 chr20:55983731 . . 0 24 hm5C_associated_SNPs_78573 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:55983717-55983747
64251 chr11 67254515 67254515 1 + G T UCEC 67254512 + 67254492 67254532 41 CGGACGCTGCACAGTGACGACGAGGGCACCGTGCTGGACGA CGGACGCTGCACAGTGACGACGATGGCACCGTGCTGGACGA < 41bp 0.932367807865801 0.707660507762595 0.51148134 0.16851646 prediction 0.449414600206412 Functional Loss - AIP ENSG00000110711 CDS Human protein_coding chr11:67254512 chr11:67254515 nonsynonymous SNV 0.045 1 24 hm5C_associated_SNPs_78576 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:67254503-67254526
64251 chr10 49618113 49618113 1 + G A LAML 49618110 + 49618090 49618130 41 TCATGGATGCAAATCTTTGCCAAGTGATTCAGATGGAGCTA TCATGGATGCAAATCTTTGCCAAATGATTCAGATGGAGCTA < 41bp 0.730585902564213 0.505880897237652 0.20382231 0.19998121 prediction 0.449410010653121 Functional Loss - MAPK8 ENSG00000107643 CDS Human protein_coding chr10:49618110 chr10:49618113 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_78580 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:49618095-49618131
64251 chr7 55221800 55221800 1 + G A BRCA 55221797 + 55221777 55221817 41 CGTACCAGATGGATGTGAACCCCGAGGGCAAATACAGCTTT CGTACCAGATGGATGTGAACCCCAAGGGCAAATACAGCTTT < 41bp 0.724697971632177 0.493145017211175 0.05865535 0.098863125 prediction 0.449395943264354 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55221797 chr7:55221800 nonsynonymous SNV 0.520 0 24 hm5C_associated_SNPs_78590 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:55221780-55221800
64251 chr4 100532601 100532601 1 + C T LUSC 100532599 + 100532579 100532619 41 ACATTGGGAAGGCTGGTCTTCACGGTAGCCAGGTAACTCAC ACATTGGGAAGGCTGGTCTTCATGGTAGCCAGGTAACTCAC < 41bp 0.837442401877001 0.61274502539243 0.41540423 0.30490446 prediction 0.449394752969142 Functional Loss - MTTP ENSG00000138823 CDS Human protein_coding chr4:100532599 chr4:100532601 synonymous SNV . 0 23 hm5C_associated_SNPs_78591 0 0 4 LIN28B POSTAR2 ENCODE chr4:100532589-100532611
64251 chr20 47706245 47706245 1 + G A UCEC 47706242 + 47706222 47706262 41 TTCTTCAAGCATTCTTAGAACGCGGTTCAAACACAATAGCA TTCTTCAAGCATTCTTAGAACGCAGTTCAAACACAATAGCA < 41bp 0.752749651719846 0.528057876981962 0.3788134 0.15605074 prediction 0.449383549475768 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47706242 chr20:47706245 nonsynonymous SNV 0.620 1 24 hm5C_associated_SNPs_78594 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47706176-47706265
64251 chr7 106545679 106545679 1 + G T LUSC 106545677 + 106545657 106545697 41 AAGAAGACATTGAATATATCCGGGATGCCCTCACAGTGGGG AAGAAGACATTGAATATATCCGTGATGCCCTCACAGTGGGG < 41bp 0.724689741961332 0.402308121006515 0.7046786 0.12716112 prediction 0.449379483922663 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106545677 chr7:106545679 synonymous SNV . 0 23 hm5C_associated_SNPs_78597 0 0 1 UCHL5 POSTAR2 ENCODE chr7:106545649-106545710
64251 chr19 47879211 47879211 1 + G T LUSC 47879208 + 47879188 47879228 41 AGTTCAAGCTTCGGCATGACCTGGCGCAGCTGCAGGCCGCT AGTTCAAGCTTCGGCATGACCTGTCGCAGCTGCAGGCCGCT < 41bp 0.72468761923084 0.311566486827147 0.80728245 0.18478978 prediction 0.449375238461681 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47879208 chr19:47879211 nonsynonymous SNV 0.625 0 24 hm5C_associated_SNPs_78600 0 0 10 FXR2 POSTAR2 GSE39682,GSM977620 chr19:47879189-47879211
64251 chr3 158531837 158531837 1 + C T LUAD 158531835 + 158531815 158531855 41 GTTCTGCTGGTCACACAACCCTCGGGATCACACTTATGATT GTTCTGCTGGTCACACAACCCTTGGGATCACACTTATGATT < 41bp 0.837951157064467 0.613264436989506 0.033183634 0.026845992 prediction 0.449373440149922 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158531835 chr3:158531837 synonymous SNV . 0 23 hm5C_associated_SNPs_78601 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:158531830-158531852
64251 chr16 84695452 84695452 1 + C T STAD 84695450 + 84695430 84695470 41 GGGCGTGGAGGCCTACAGCCCGCAGTGCAACCAGTGGACCC GGGCGTGGAGGCCTACAGCCCGTAGTGCAACCAGTGGACCC < 41bp 0.784264675645956 0.559578777683668 0.3106474 0.20721665 prediction 0.449371795924574 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695450 chr16:84695452 stopgain 1.000 1 23 hm5C_associated_SNPs_78602 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:84695451-84695452
64251 chr2 176988674 176988674 1 + C T READ 176988672 + 176988652 176988692 41 CTCTTTGTAGACAACCCCGCCGCGAACTGGATCCACGCTCG CTCTTTGTAGACAACCCCGCCGTGAACTGGATCCACGCTCG < 41bp 0.809656918188021 0.584972080317344 0.36408177 0.3635882 prediction 0.449369675741354 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988672 chr2:176988674 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_78603 0 0 9 U2AF2 POSTAR2 GSE83923,CSM2221660 chr2:176988660-176988680
64251 chr15 90760693 90760693 1 + C T BLCA 90760691 + 90760671 90760711 41 GCTCTGAAGAGCGGCCATTCCTCAGATTCGAAGCTGAACAC GCTCTGAAGAGCGGCCATTCCTTAGATTCGAAGCTGAACAC < 41bp 0.724680431825672 0.446227675468987 0.76106685 0.5439715 prediction 0.449360863651344 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90760691 chr15:90760693 synonymous SNV . 0 23 hm5C_associated_SNPs_78606 0 0 1 BUD13 POSTAR2 ENCODE chr15:90760638-90760699
64251 chr2 54856389 54856389 1 + G A ACC 54856386 + 54856366 54856406 41 AAGGAAGGCGAAGACATGATCGCGGAGGAGCACTTCGGGTC AAGGAAGGCGAAGACATGATCGCAGAGGAGCACTTCGGGTC < 41bp 0.774488527003777 0.549812350663454 0.8971604 0.8778584 prediction 0.449352352680645 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856386 chr2:54856389 synonymous SNV . 0 24 hm5C_associated_SNPs_78608 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr2:54856383-54856408
64251 chr1 171761219 171761219 1 + G A UCEC 171761216 + 171761196 171761236 41 GCAGCCTCCCCCTCTTTGTCCACGATCATTTTCCAAAGTCC GCAGCCTCCCCCTCTTTGTCCACAATCATTTTCCAAAGTCC < 41bp 0.798640113506852 0.573967948411553 0.25250477 0.061050475 prediction 0.449344330190597 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171761216 chr1:171761219 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_78611 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:171761213-171761233
64251 chr6 3259313 3259313 1 + G C CESC 3259312 + 3259292 3259332 41 CTCCCTGCACAACTTCAGCGCGAGGCTGTGGGAGCAGCTGG CTCCCTGCACAACTTCAGCGCCAGGCTGTGGGAGCAGCTGG < 41bp 0.724668668749092 0.409237936744074 0.81952924 0.30629086 prediction 0.449337337498185 Functional Loss - PSMG4 ENSG00000180822 CDS Human protein_coding chr6:3259312 chr6:3259313 synonymous SNV . 0 22 hm5C_associated_SNPs_78612 0 0 19 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:3259300-3259320
64251 chr2 197511104 197511104 1 + C T LGG 197511102 + 197511082 197511122 41 AGTGTCCAGACCGGTCCTTTCTCCAACCCACATCAACGCTA AGTGTCCAGACCGGTCCTTTCTTCAACCCACATCAACGCTA < 41bp 0.724667928338176 0.428205381373935 0.9602436 0.052363545 prediction 0.449335856676352 Functional Loss - CCDC150 ENSG00000144395 CDS Human protein_coding chr2:197511102 chr2:197511104 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_78613 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:197511098-197511119
64251 chr9 96429453 96429453 1 + C T SKCM 96429451 + 96429431 96429471 41 GTCAAGAAGGAGAGTGGGAGCTCGGCAGCTGGCATCTTGGA GTCAAGAAGGAGAGTGGGAGCTTGGCAGCTGGCATCTTGGA < 41bp 0.724665844146844 0.440183435850321 0.20724568 0.22453827 prediction 0.449331688293688 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96429451 chr9:96429453 nonsynonymous SNV 0.521 1 23 hm5C_associated_SNPs_78615 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:96429442-96429463
64251 chr11 71701743 71701743 1 + T C UCEC 71701742 + 71701722 71701762 41 TTTGCAGAAATGTGTGCAGACTACATGGCATCTACCATAGG TTTGCAGAAATGTGTGCAGACCACATGGCATCTACCATAGG < 41bp 0.724663071947832 0.451192371980009 0.92908216 0.09342438 prediction 0.449326143895665 Functional Loss - RNF121 ENSG00000137522 CDS Human protein_coding chr11:71701742 chr11:71701743 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_78616 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:71701740-71701761
64251 chr15 66838995 66838995 1 + G T UCEC 66838993 + 66838973 66839013 41 TTCTTTACTAACATGGTTACCTGCAGCCAGGTGCATTTCAA TTCTTTACTAACATGGTTACCTTCAGCCAGGTGCATTTCAA < 41bp 0.724654812663809 0.399429572716276 0.09735197 0.04807791 prediction 0.449309625327619 Functional Loss - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66838993 chr15:66838995 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_78623 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:66838978-66839008
64251 chr19 58805711 58805711 1 + G A rs34451432 58805708 + 58805688 58805728 41 GGCTACAAAACTCTCAGACTCAGGGAAAACTGCGTCCTGAG GGCTACAAAACTCTCAGACTCAGAGAAAACTGCGTCCTGAG < 41bp 0.775286376576335 0.550637055125118 0.92625296 0.8737831 prediction 0.449298642902434 Functional Loss - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58805708 chr19:58805711 synonymous SNV . 0 24 hm5C_associated_SNPs_78629 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58805679-58805713
64251 chr6 161519333 161519333 1 + C T COAD 161519331 + 161519311 161519351 41 ACTCGGAGCATGCCTTCCGACGCGCGGAGCCATGGCAGCCC ACTCGGAGCATGCCTTCCGACGTGCGGAGCCATGGCAGCCC < 41bp 0.724641977285359 0.449238531450714 0.3281934 0.6243142 prediction 0.449283954570718 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161519331 chr6:161519333 nonsynonymous SNV 0.027 0 23 hm5C_associated_SNPs_78635 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:161519307-161519340
64251 chr2 113405310 113405310 1 + C T SKCM 113405307 + 113405287 113405327 41 TCCTGGTTCGTGCATTCATCCTCCATAAGGTAACCTTTCTC TCCTGGTTCGTGCATTCATCCTCTATAAGGTAACCTTTCTC < 41bp 0.724638884138932 0.495619242814699 0.9657755 0.94101036 prediction 0.449277768277865 Functional Loss - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113405307 chr2:113405310 nonsynonymous SNV 0.988 2 24 hm5C_associated_SNPs_78639 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:113405293-113405314
64251 chr17 42254194 42254194 1 - C T COAD 42254197 - 42254177 42254217 41 AGCCACATGTTGCTCCAGGCCGCGCGCCGCCGCCACGTGCA AGCCACATGTTGCTCCAGGCCGCACGCCGCCGCCACGTGCA < 41bp 0.800882000942516 0.576243839869854 0.13710168 0.0400953 prediction 0.449276322145326 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254197 chr17:42254194 nonsynonymous SNV 0.342 0 24 hm5C_associated_SNPs_78640 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:42254161-42254210
64251 chr20 42089353 42089353 1 + C T PAAD 42089351 + 42089331 42089371 41 TTCCTTGTCCAGTTCCAGGTCGCGGAGCAAAGGTCGATCAC TTCCTTGTCCAGTTCCAGGTCGTGGAGCAAAGGTCGATCAC < 41bp 0.816745586906079 0.592107475252091 0.38903514 0.35729653 prediction 0.449276223307976 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089351 chr20:42089353 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_78641 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:42089335-42089356
64251 chr19 17873612 17873612 1 + G A CESC 17873609 + 17873589 17873629 41 TTTGAGGTCCTGTACCACAGCGTGAAGCAGGGGCCCATCTC TTTGAGGTCCTGTACCACAGCGTAAAGCAGGGGCCCATCTC < 41bp 0.783831503100094 0.559194463847252 0.19908205 0.12752941 prediction 0.449274078505685 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17873609 chr19:17873612 synonymous SNV . 0 24 hm5C_associated_SNPs_78642 0 0 5 DDX24 POSTAR2 ENCODE chr19:17873567-17873632
64251 chr6 13977623 13977623 1 + G A rs144985032 13977620 + 13977600 13977640 41 GACAACAACATCCTTGTAAACTTGACTTGTGGAGGCAAAGG GACAACAACATCCTTGTAAACTTAACTTGTGGAGGCAAAGG < 41bp 0.724636710041797 0.495017995329302 0.19097176 0.11321437 prediction 0.449273420083593 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977620 chr6:13977623 synonymous SNV . 0 24 hm5C_associated_SNPs_78643 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977565-13977643
64251 chr6 13977624 13977624 1 + A C UCEC 13977620 + 13977600 13977640 41 GACAACAACATCCTTGTAAACTTGACTTGTGGAGGCAAAGG GACAACAACATCCTTGTAAACTTGCCTTGTGGAGGCAAAGG < 41bp 0.724636710041797 0.306937909670058 0.19097176 0.088024795 prediction 0.449273420083593 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977620 chr6:13977624 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_78644 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977565-13977643
64251 chr14 59113460 59113460 1 + G T ACC 59113457 + 59113437 59113477 41 GGGAGAATGTGGGGCTGTACCCCGCGCCTGTGCCTCTGCCC GGGAGAATGTGGGGCTGTACCCCTCGCCTGTGCCTCTGCCC < 41bp 0.724631850749629 0.325320421895408 0.16720161 0.12988752 prediction 0.449263701499259 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113457 chr14:59113460 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_78645 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:59113453-59113505
64251 chr4 128807079 128807079 1 + G A LUAD 128807076 + 128807056 128807096 41 CATTTCACCAGAAATTGCCACTCGAAGTGCACATGGCCTTG CATTTCACCAGAAATTGCCACTCAAAGTGCACATGGCCTTG < 41bp 0.741557430122589 0.516926829801368 0.44007093 0.10991609 prediction 0.449261200642444 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128807076 chr4:128807079 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_78646 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:128807060-128807080
64251 chr1 151261143 151261143 1 + G T LUAD 151261141 + 151261121 151261161 41 GCCAATTTTCAGACCCATCTCCGGGAGGCCTGTCTGCACGT GCCAATTTTCAGACCCATCTCCTGGAGGCCTGTCTGCACGT < 41bp 0.724624038984135 0.369565254075652 0.9332323 0.20132646 prediction 0.44924807796827 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151261141 chr1:151261143 nonsynonymous SNV 0.992 0 23 hm5C_associated_SNPs_78650 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:151261132-151261153
64251 chr1 117618328 117618328 1 + G A UCEC 117618325 + 117618305 117618345 41 GGGAGCCCCCTACTCTTTGACTCGACTCTGGACTTAGAGAC GGGAGCCCCCTACTCTTTGACTCAACTCTGGACTTAGAGAC < 41bp 0.779083461089863 0.554461737478486 0.14378771 0.06290582 prediction 0.449243447222753 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618325 chr1:117618328 synonymous SNV . 0 24 hm5C_associated_SNPs_78652 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:117618290-117618341
64251 chr17 15641669 15641669 1 + A C SKCM 15641668 + 15641648 15641688 41 TCACTTTTGCTAGATATTGACAGAATCAAGTCCCAGAACCC TCACTTTTGCTAGATATTGACCGAATCAAGTCCCAGAACCC < 41bp 0.724619881533217 0.450006034126004 0.8000084 0.42346588 prediction 0.449239763066434 Functional Loss - TBC1D26 ENSG00000214946 CDS Human protein_coding chr17:15641668 chr17:15641669 synonymous SNV . 0 22 hm5C_associated_SNPs_78653 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:15641659-15641697
64251 chr16 53907748 53907748 1 + C T STAD 53907746 + 53907726 53907766 41 TGTTTTGGCCGGTTCACAACCTCGGTTTAGTTCCACCCACC TGTTTTGGCCGGTTCACAACCTTGGTTTAGTTCCACCCACC < 41bp 0.841954018569811 0.617337752966254 0.5712589 0.75920904 prediction 0.449232531207113 Functional Loss - FTO ENSG00000140718 CDS Human protein_coding chr16:53907746 chr16:53907748 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_78654 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:53907737-53907769
64251 chr5 141309289 141309289 1 + G T UCEC 141309287 + 141309267 141309307 41 CTTTGAGAGGAGCTCGTCCTCAGGACCCCTCTGAGGAAGGT CTTTGAGAGGAGCTCGTCCTCATGACCCCTCTGAGGAAGGT < 41bp 0.908038363704301 0.683422317628662 0.86910546 0.12486121 prediction 0.449232092151278 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141309287 chr5:141309289 nonsynonymous SNV 0.046 0 23 hm5C_associated_SNPs_78655 0 0 3 DDX24 POSTAR2 ENCODE chr5:141309230-141309306
64251 chr3 141163624 141163624 1 + T C UCEC 141163623 + 141163603 141163643 41 GTCAAACTATGTTGCTGATCCTGGAGGATCACTGAGCAAAA GTCAAACTATGTTGCTGATCCCGGAGGATCACTGAGCAAAA < 41bp 0.753245924558432 0.528630943215066 0.29425 0.884063 prediction 0.449229962686733 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141163623 chr3:141163624 synonymous SNV . 0 22 hm5C_associated_SNPs_78656 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141163620-141163641
64251 chr16 67660551 67660551 1 + A C STAD 67660550 + 67660530 67660570 41 ATGAGCGCTATGCCCTCATCCAGCATCAGAAGTCACACAAG ATGAGCGCTATGCCCTCATCCCGCATCAGAAGTCACACAAG < 41bp 0.805938682322672 0.581324793352011 0.08473545 0.034614205 prediction 0.449227777941323 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67660550 chr16:67660551 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_78657 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:67660487-67660559
64251 chr1 161771958 161771958 1 + G A UCEC 161771955 + 161771935 161771975 41 GAGTCACACAGCTCCCTAATCACGTGGTGAATGTGGTACCA GAGTCACACAGCTCCCTAATCACATGGTGAATGTGGTACCA < 41bp 0.776661472800021 0.552053728245143 0.84239435 0.45184746 prediction 0.449215489109755 Functional Loss - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161771955 chr1:161771958 nonsynonymous SNV 0.942 0 24 hm5C_associated_SNPs_78661 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:161771956-161771992
64251 chr16 2282320 2282320 1 + G T UCEC 2282317 + 2282297 2282337 41 CAGGTGAAGCTACTGGTGAACAAGGATGGCCGCTATGTGTG CAGGTGAAGCTACTGGTGAACAATGATGGCCGCTATGTGTG < 41bp 0.724607350917773 0.407336069579663 0.45020735 0.21139547 prediction 0.449214701835547 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2282317 chr16:2282320 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_78662 0 0 7 BUD13 POSTAR2 ENCODE chr16:2282304-2282341
64251 chr17 42266404 42266404 1 + G T UCEC 42266402 + 42266382 42266422 41 TCCTGCAGCGTGGACCCTGCCAGCAGCCAGGCCATGGAGCT TCCTGCAGCGTGGACCCTGCCATCAGCCAGGCCATGGAGCT < 41bp 0.811359338524954 0.586760666303249 0.3762837 0.049684882 prediction 0.44919734444341 Functional Loss - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266402 chr17:42266404 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_78664 0 0 2 BUD13 POSTAR2 ENCODE chr17:42266371-42266424
64251 chr9 127990287 127990287 1 + G A BLCA 127990284 + 127990264 127990304 41 CAGGGACAAAGCTCTTCATCCACGGAGGCTTGGCGGGGGAC CAGGGACAAAGCTCTTCATCCACAGAGGCTTGGCGGGGGAC < 41bp 0.77174864597634 0.547150198849297 0.85016537 0.2088368 prediction 0.449196894254085 Functional Loss - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127990284 chr9:127990287 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_78665 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:127990281-127990304
64251 chr1 60338555 60338555 1 + G A CESC 60338552 + 60338532 60338572 41 CACTGGTGCGTGCACTCCTGCGCGGTCTTTCTTAGCGCAGC CACTGGTGCGTGCACTCCTGCGCAGTCTTTCTTAGCGCAGC < 41bp 0.724598177504896 0.4915003644502 0.24305713 0.07581726 prediction 0.449196355009793 Functional Loss - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60338552 chr1:60338555 nonsynonymous SNV 0.531 1 24 hm5C_associated_SNPs_78667 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:60338530-60338555
64251 chr3 43345197 43345197 1 + G T UCEC 43345195 + 43345175 43345215 41 GTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAA GTTCAGCAACAAATTTCAACCATGGAAGAAGCTCACTACAA < 41bp 0.724592615647324 0.390874756767828 0.93641424 0.32172996 prediction 0.449185231294648 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43345195 chr3:43345197 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_78668 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:43345180-43345200
64251 chr10 43882891 43882891 1 - C T LGG 43882894 - 43882874 43882914 41 GGATCACATTGCCTGTGGACCCCGAAGGCAAGATTACAGGG GGATCACATTGCCTGTGGACCCCAAAGGCAAGATTACAGGG < 41bp 0.724583880626124 0.480211428274598 0.17089593 0.2281732 prediction 0.449167761252248 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882894 chr10:43882891 nonsynonymous SNV 0.954 1 24 hm5C_associated_SNPs_78670 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43882846-43882894
64251 chr10 43882892 43882892 1 - G A STAD 43882894 - 43882874 43882914 41 GGATCACATTGCCTGTGGACCCCGAAGGCAAGATTACAGGG GGATCACATTGCCTGTGGACCCTGAAGGCAAGATTACAGGG < 41bp 0.724583880626124 0.443467305402086 0.17089593 0.16369444 prediction 0.449167761252248 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882894 chr10:43882892 synonymous SNV . 0 23 hm5C_associated_SNPs_78671 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:43882846-43882894
64251 chr1 35852806 35852806 1 + G A UCEC 35852803 + 35852783 35852823 41 GTCCCAGCATGTTGGGTTTGCACGAAGTGTTGTGAAACTCA GTCCCAGCATGTTGGGTTTGCACAAAGTGTTGTGAAACTCA < 41bp 0.749726365386675 0.525158090120293 0.1171951 0.07251316 prediction 0.449136550532765 Functional Loss - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35852803 chr1:35852806 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_78676 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35852803-35852861
64251 chr4 25316954 25316954 1 + A C COAD 25316950 + 25316930 25316970 41 TCTCTTTCAGTTGTCAGGAGCTAGACTTGCTGCCCGAGAAG TCTCTTTCAGTTGTCAGGAGCTAGCCTTGCTGCCCGAGAAG < 41bp 0.724565765814314 0.316193583973332 0.7348479 0.34940618 prediction 0.449131531628629 Functional Loss - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25316950 chr4:25316954 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_78678 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:25316937-25316972
64251 chr1 42925448 42925448 1 + C T LUSC 42925446 + 42925426 42925466 41 GGTGGCTAATATCCTTGAGTCACGACAGTCCTTTGTGTTTA GGTGGCTAATATCCTTGAGTCATGACAGTCCTTTGTGTTTA < 41bp 0.838184570968725 0.613622288683429 0.17855254 0.22223222 prediction 0.449124564570591 Functional Loss - PPCS ENSG00000127125 CDS Human protein_coding chr1:42925446 chr1:42925448 stopgain 0.857 0 23 hm5C_associated_SNPs_78680 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42925419-42925463
64251 chr14 100344863 100344863 1 + G A BLCA 100344860 + 100344840 100344880 41 CTCTTCTGAACGAGTGTCTCCTGGGGGTCGAAGGGAAAGCA CTCTTCTGAACGAGTGTCTCCTGAGGGTCGAAGGGAAAGCA < 41bp 0.724559516131492 0.481789810388157 0.89366716 0.63522625 prediction 0.449119032262983 Functional Loss - EML1 ENSG00000066629 CDS Human protein_coding chr14:100344860 chr14:100344863 nonsynonymous SNV 0.075 1 24 hm5C_associated_SNPs_78681 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:100344848-100344874
64251 chr1 166818283 166818283 1 + G A SARC 166818280 + 166818260 166818300 41 CAGCTTTGGCCTCCGTCTGCCTCGGGATATCACAGAGCTGC CAGCTTTGGCCTCCGTCTGCCTCAGGATATCACAGAGCTGC < 41bp 0.724558301149468 0.483618896933805 0.12811476 0.07115778 prediction 0.449116602298936 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818280 chr1:166818283 nonsynonymous SNV 0.951 0 24 hm5C_associated_SNPs_78682 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:166818256-166818285
64251 chr18 12009902 12009902 1 + C T COAD 12009900 + 12009880 12009920 41 AGGTTCATTGCAGAAGAGGCCGCGGCTTCTGGGGCCAAGTG AGGTTCATTGCAGAAGAGGCCGTGGCTTCTGGGGCCAAGTG < 41bp 0.724554813019955 0.454916948463912 0.7850962 0.28412363 prediction 0.449109626039909 Functional Loss - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12009900 chr18:12009902 nonsynonymous SNV 0.266 0 23 hm5C_associated_SNPs_78683 0 0 2 GRWD1 POSTAR2 ENCODE chr18:12009881-12009934
64251 chr1 87797721 87797721 1 + C T BLCA 87797719 + 87797699 87797739 41 ATGGTGAATCCGGGCAGCAGCTCGCAGCCGCCCCCGGTGAC ATGGTGAATCCGGGCAGCAGCTTGCAGCCGCCCCCGGTGAC < 41bp 0.828435351597492 0.603890275817388 0.41073096 0.4390444 prediction 0.449090151560208 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87797719 chr1:87797721 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_78692 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:87797704-87797722
64251 chr11 118516456 118516456 1 + G A UCEC 118516453 + 118516433 118516473 41 TCTTCCCCTTCTCTCCCCAGCGCGAGTGGTCTGGACATGGG TCTTCCCCTTCTCTCCCCAGCGCAAGTGGTCTGGACATGGG < 41bp 0.753172711529246 0.528628983191115 0.3602613 0.3388313 prediction 0.449087456676261 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516453 chr11:118516456 synonymous SNV . 0 24 hm5C_associated_SNPs_78694 0 0 1 GRWD1 POSTAR2 ENCODE chr11:118516455-118516565
64251 chr16 20430608 20430608 1 + G T THYM 20430606 + 20430586 20430626 41 AGAAGGACCTCAAGTACCGGCTGCAGGCGTCCAGGGCCAAG AGAAGGACCTCAAGTACCGGCTTCAGGCGTCCAGGGCCAAG < 41bp 0.724535716735904 0.380701245226981 0.12695628 0.07891995 prediction 0.449071433471809 Functional Loss - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20430606 chr16:20430608 synonymous SNV . 0 23 hm5C_associated_SNPs_78698 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20430566-20430712
64251 chr12 520947 520947 1 + A C rs4980895 520946 + 520926 520966 41 TCCAAACGTGGTGTTGCCGTCAGTGGTCCCACCAAGAGGAG TCCAAACGTGGTGTTGCCGTCCGTGGTCCCACCAAGAGGAG < 41bp 0.724535704798801 0.459463437880881 0.52174044 0.34024745 prediction 0.449071409597601 Functional Loss - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:520946 chr12:520947 nonsynonymous SNV 0.013 1 22 hm5C_associated_SNPs_78699 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:520930-520963
64251 chr16 58537758 58537758 1 + C T SKCM 58537756 + 58537736 58537776 41 ATGTAGTGATCCGGGGCTCCCCCAAGGGGAACCGCCCAGCC ATGTAGTGATCCGGGGCTCCCCTAAGGGGAACCGCCCAGCC < 41bp 0.724532159625697 0.44041679077082 0.40275374 0.40046647 prediction 0.449064319251394 Functional Loss - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58537756 chr16:58537758 synonymous SNV . 0 23 hm5C_associated_SNPs_78700 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:58537740-58537760
64251 chr7 100732120 100732120 1 + G A SKCM 100732117 + 100732097 100732137 41 CCTGGAGACAAGCGGTCCCCCCGGATCACCGGGCTCTGTCC CCTGGAGACAAGCGGTCCCCCCGAATCACCGGGCTCTGTCC < 41bp 0.804088448672038 0.579557308812088 0.13518581 0.013310105 prediction 0.4490622797199 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732117 chr7:100732120 synonymous SNV . 0 24 hm5C_associated_SNPs_78701 0 0 2 RBM15 POSTAR2 ENCODE chr7:100732073-100732122
64251 chr2 74758723 74758723 1 + G T UCEC 74758721 + 74758701 74758741 41 AACTGGGGGCTGTATCCCTGCAGGATGGGGAGGTGATTGGA AACTGGGGGCTGTATCCCTGCATGATGGGGAGGTGATTGGA < 41bp 0.724527619988481 0.384951031698991 0.8593577 0.42319113 prediction 0.449055239976962 Functional Loss - HTRA2;HTRA2 ENSG00000115317;ENSG00000115317 exonic;splicing Human other chr2:74758721 chr2:74758723 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_78703 0 0 7 BUD13 POSTAR2 ENCODE chr2:74758722-74758803
64251 chr19 14071304 14071304 1 + G A SKCM 14071301 + 14071281 14071321 41 AGTGTCTGGAGCTCCTACCGCAAGAGCTGCGTGGACATGGT AGTGTCTGGAGCTCCTACCGCAAAAGCTGCGTGGACATGGT < 41bp 0.778029615930608 0.55351041392541 0.4578951 0.21021307 prediction 0.449038404010396 Functional Loss - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14071301 chr19:14071304 synonymous SNV . 0 24 hm5C_associated_SNPs_78709 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14071255-14071304
64251 chr18 72998479 72998479 1 + G C DLBC 72998475 + 72998455 72998495 41 CCTGAGCCAGCAGGAATGGCCGCAGAGGTGGCCCTGAGTGA CCTGAGCCAGCAGGAATGGCCGCACAGGTGGCCCTGAGTGA < 41bp 0.724513047048554 0.43023105809992 0.31194293 0.10153362 prediction 0.449026094097107 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998475 chr18:72998479 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_78714 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr18:72998478-72998479
64251 chr1 26873383 26873383 1 + C T SKCM 26873381 + 26873361 26873401 41 GAGGGCGTCCTCAAGGAGATCTCCATCACGCACCACGTCAA GAGGGCGTCCTCAAGGAGATCTTCATCACGCACCACGTCAA < 41bp 0.72451191904805 0.428972423276361 0.9597261 0.1258829 prediction 0.449023838096101 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26873381 chr1:26873383 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_78716 0 0 1 PPIG POSTAR2 ENCODE chr1:26873357-26873397
64251 chr1 26873382 26873382 1 + T C SKCM 26873381 + 26873361 26873401 41 GAGGGCGTCCTCAAGGAGATCTCCATCACGCACCACGTCAA GAGGGCGTCCTCAAGGAGATCCCCATCACGCACCACGTCAA < 41bp 0.72451191904805 0.448050701048366 0.9597261 0.16445875 prediction 0.449023838096101 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26873381 chr1:26873382 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_78717 0 0 1 PPIG POSTAR2 ENCODE chr1:26873357-26873397
64251 chr19 10398019 10398019 1 + G A KICH 10398016 + 10397996 10398036 41 ACGTGAGGGCCTGGAGCTCCCTCGCGCACTGCCTCGTGACC ACGTGAGGGCCTGGAGCTCCCTCACGCACTGCCTCGTGACC < 41bp 0.804615470972367 0.580106310206545 0.23757711 0.12083626 prediction 0.449018321531643 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398016 chr19:10398019 nonsynonymous SNV 0.012 1 24 hm5C_associated_SNPs_78721 0 0 2 GEMIN5 POSTAR2 ENCODE chr19:10398012-10398051
64251 chr16 1838703 1838703 1 + G A rs11540961 1838700 + 1838680 1838720 41 AAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGACTAAG AAGATTCTGGACGCGACGCCCGCATGCCTCCCCTGACTAAG < 41bp 0.772752782231517 0.548252061537526 0.13914528 0.02577284 prediction 0.449001441387983 Functional Loss - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1838700 chr16:1838703 synonymous SNV . 0 24 hm5C_associated_SNPs_78729 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1838682-1838717
64251 chr19 56190155 56190155 1 + G A UCEC 56190152 + 56190132 56190172 41 ACCTACAACGTTGTCGCCTTCTCGGAGATCATGAGCATGAT ACCTACAACGTTGTCGCCTTCTCAGAGATCATGAGCATGAT < 41bp 0.761545224271067 0.537046234361959 0.14970618 0.04299563 prediction 0.448997979818216 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56190152 chr19:56190155 synonymous SNV . 0 24 hm5C_associated_SNPs_78730 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56190143-56190210
64251 chr8 55047874 55047874 1 + C T SARC 55047872 + 55047852 55047892 41 TCCCTTGCAGGGCGGTGGGGCCCGGGCCCTGGACCTACTCC TCCCTTGCAGGGCGGTGGGGCCTGGGCCCTGGACCTACTCC < 41bp 0.729937993481141 0.505439242974594 0.5546411 0.48441756 prediction 0.448997501013094 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55047872 chr8:55047874 nonsynonymous SNV 0.053 1 23 hm5C_associated_SNPs_78731 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:55047832-55047882
64251 chr4 5754671 5754671 1 + G A rs183114391 5754668 + 5754648 5754688 41 GCCGGCTGGCTGCCATCTCCCACGGCCTGGAGCTGCTGGCT GCCGGCTGGCTGCCATCTCCCACAGCCTGGAGCTGCTGGCT < 41bp 0.809623884208246 0.58512671204841 0.7268968 0.36168522 prediction 0.448994344319672 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5754668 chr4:5754671 nonsynonymous SNV 0.187 0 24 hm5C_associated_SNPs_78734 0 0 2 EIF3H POSTAR2 ENCODE chr4:5754642-5754754
64251 chr5 145838728 145838728 1 + G A rs568528395 145838725 + 145838705 145838745 41 GCACAAGCTCAGGCCCAGGCCCAGGCTCAGGTCCAGGCCCA GCACAAGCTCAGGCCCAGGCCCAAGCTCAGGTCCAGGCCCA < 41bp 0.797395776613129 0.572900669552734 0.47939616 0.2314539 prediction 0.44899021412079 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838725 chr5:145838728 synonymous SNV . 0 24 hm5C_associated_SNPs_78736 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr19 35556871 35556871 1 + G A GBM 35556868 + 35556848 35556888 41 GTTGGGGCACTGGCTGTGCCCTGGCCCAGAAGCCAGGCGTC GTTGGGGCACTGGCTGTGCCCTGACCCAGAAGCCAGGCGTC < 41bp 0.724488622125231 0.467735342989726 0.2575326 0.091026664 prediction 0.448977244250462 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35556868 chr19:35556871 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_78740 0 0 1 SRSF9 POSTAR2 ENCODE chr19:35556813-35556884
64251 chr19 4488702 4488702 1 + C T UCEC 4488700 + 4488680 4488720 41 GCTCCTCCGACAGCGAGGCCCCCGAGGCCAACCCCGCCGAC GCTCCTCCGACAGCGAGGCCCCTGAGGCCAACCCCGCCGAC < 41bp 0.814339998294772 0.589856503781708 0.70694077 0.46693033 prediction 0.448966989026128 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4488700 chr19:4488702 synonymous SNV . 0 23 hm5C_associated_SNPs_78741 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:4488688-4488743
64251 chr3 122399790 122399790 1 + G T BLCA 122399787 + 122399767 122399807 41 GGCTCCTGGGGCCCCGACCCCCCGAAGAACTTGAACACCAA GGCTCCTGGGGCCCCGACCCCCCTAAGAACTTGAACACCAA < 41bp 0.724483198373192 0.352990486433618 0.31841558 0.20731962 prediction 0.448966396746384 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399787 chr3:122399790 synonymous SNV . 0 24 hm5C_associated_SNPs_78742 0 0 4 DDX3X POSTAR2 ENCODE chr3:122399731-122399804
64251 chr16 1816093 1816093 1 + G A GBM 1816090 + 1816070 1816110 41 TGCCACCCGCTGCAACGTGCCGCGGAGCAACTGCTCCTCCC TGCCACCCGCTGCAACGTGCCGCAGAGCAACTGCTCCTCCC < 41bp 0.764768170331669 0.540285085435135 0.89664996 0.7146393 prediction 0.448966169793069 Functional Loss - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1816090 chr16:1816093 nonsynonymous SNV 0.023 1 24 hm5C_associated_SNPs_78743 0 0 4 AKAP8L POSTAR2 ENCODE chr16:1816062-1816097
64251 chr10 6262819 6262819 1 + G T UCEC 6262817 + 6262797 6262837 41 GCGACTCAGGCCTGTCCAGCCGGGGCAAGAAGGTGCGGGGT GCGACTCAGGCCTGTCCAGCCGTGGCAAGAAGGTGCGGGGT < 41bp 0.909405323197598 0.684925622564693 0.9368105 0.38782528 prediction 0.448959401265811 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6262817 chr10:6262819 synonymous SNV . 0 23 hm5C_associated_SNPs_78746 0 0 1 PPIG POSTAR2 ENCODE chr10:6262758-6262824
64251 chr2 233735112 233735112 1 + G T SARC 233735110 + 233735090 233735130 41 GGTCTCCGGGGTTCTGGCCCCTGCGGTGCTCACAGGTAAGA GGTCTCCGGGGTTCTGGCCCCTTCGGTGCTCACAGGTAAGA < 41bp 0.724477393099985 0.400106326071874 0.27594876 0.109487444 prediction 0.448954786199971 Functional Loss - C2orf82 ENSG00000182600 CDS Human protein_coding chr2:233735110 chr2:233735112 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_78748 0 0 4 DDX3X POSTAR2 ENCODE chr2:233735020-233735125
64251 chr19 11352346 11352346 1 + G T SARC 11352344 + 11352324 11352364 41 CTCCCTCCCCAGACTCCACACAGCGGCGCTCCCAGCCTGAA CTCCCTCCCCAGACTCCACACATCGGCGCTCCCAGCCTGAA < 41bp 0.72447536523753 0.37462591155811 0.44897902 0.16923898 prediction 0.448950730475061 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11352344 chr19:11352346 nonsynonymous SNV 0.893 1 23 hm5C_associated_SNPs_78750 0 0 1 SF3A3 POSTAR2 ENCODE chr19:11352269-11352360
64251 chr2 61258969 61258969 1 + C T BLCA 61258967 + 61258947 61258987 41 GGATGTAGCAAATCACTTTTCCCGATTGAAAATACACTTTA GGATGTAGCAAATCACTTTTCCTGATTGAAAATACACTTTA < 41bp 0.724470802682506 0.440452550928815 0.19559366 0.2433593 prediction 0.448941605365012 Functional Loss - PEX13 ENSG00000162928 CDS Human protein_coding chr2:61258967 chr2:61258969 stopgain 0.989 1 23 hm5C_associated_SNPs_78754 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:61258960-61258980
64251 chr11 32610202 32610202 1 + G T UCEC 32610199 + 32610179 32610219 41 TGATCCTGGAACCAGACAAGCAAGAAGCTTTGATTGAAAGC TGATCCTGGAACCAGACAAGCAATAAGCTTTGATTGAAAGC < 41bp 0.724469970714232 0.336209912512974 0.24958643 0.25443286 prediction 0.448939941428465 Functional Loss - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32610199 chr11:32610202 stopgain 0.997 1 24 hm5C_associated_SNPs_78755 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:32610130-32610277
64251 chr3 45776851 45776851 1 + C T SKCM 45776848 + 45776828 45776868 41 GTTTGTTAGCTCGTCGTTCACTTCAGGCCCAACTTCAGGTG GTTTGTTAGCTCGTCGTTCACTTTAGGCCCAACTTCAGGTG < 41bp 0.724459842270659 0.498892049772215 0.068630576 0.063693136 prediction 0.448919684541317 Functional Loss - SACM1L ENSG00000211456 CDS Human protein_coding chr3:45776848 chr3:45776851 stopgain 0.947 1 24 hm5C_associated_SNPs_78758 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:45776775-45776857
64251 chr21 30715022 30715022 1 + G A UCEC 30715019 + 30714999 30715039 41 GGAAACAGTGAGCCTGGCTACGCGCGAGGGCAGGAGTCCCA GGAAACAGTGAGCCTGGCTACGCACGAGGGCAGGAGTCCCA < 41bp 0.753039689397613 0.528580747120575 0.1055021 0.086711824 prediction 0.448917884554075 Functional Loss - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715019 chr21:30715022 synonymous SNV . 0 24 hm5C_associated_SNPs_78762 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:30715021-30715022
64251 chr7 73245568 73245568 1 + C T GBM 73245566 + 73245546 73245586 41 GCTACAGGTAATGGGCATCGCGCTGGCCGTCCTGGGCTGGC GCTACAGGTAATGGGCATCGCGTTGGCCGTCCTGGGCTGGC < 41bp 0.736329580733053 0.511871699396763 0.30682817 0.34071216 prediction 0.448915762672579 Functional Loss - CLDN4 ENSG00000189143 CDS Human protein_coding chr7:73245566 chr7:73245568 synonymous SNV . 0 23 hm5C_associated_SNPs_78765 0 0 4 DDX3X POSTAR2 ENCODE chr7:73245550-73245624
64251 chr1 46159078 46159078 1 + G A LUSC 46159075 + 46159055 46159095 41 GCAGAAGCAAGCACTTCTAGCCAGACCCTCAAGCACCATCA GCAGAAGCAAGCACTTCTAGCCAAACCCTCAAGCACCATCA < 41bp 0.766590111336264 0.542135535343084 0.26013023 0.083958566 prediction 0.44890915198636 Functional Loss - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46159075 chr1:46159078 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_78769 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:46159078-46159107
64251 chr16 2258299 2258299 1 + G A GBM 2258296 + 2258276 2258316 41 GACTAAGATCCCTGCCCACACGCGCTACGCCCTGCAGTGTC GACTAAGATCCCTGCCCACACGCACTACGCCCTGCAGTGTC < 41bp 0.762521550898536 0.53806798724896 0.1586349 0.09437868 prediction 0.448907127299151 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258296 chr16:2258299 nonsynonymous SNV 0.877 2 24 hm5C_associated_SNPs_78771 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:2258260-2258300
64251 chr19 58904797 58904797 1 + C T GBM 58904795 + 58904775 58904815 41 AGGACTCCACACGCATTGGGCGCGCCGGGACTGTGAGACGA AGGACTCCACACGCATTGGGCGTGCCGGGACTGTGAGACGA < 41bp 0.724447345569449 0.455137314843179 0.100091904 0.09504327 prediction 0.448894691138897 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58904795 chr19:58904797 synonymous SNV . 0 23 hm5C_associated_SNPs_78776 0 0 82 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58904740-58904820
64251 chr1 153614905 153614905 1 + G A SKCM 153614902 + 153614882 153614922 41 TTAGGGGCGGGATGTCACTCCGAGGTCAGTGCTGTGTACCC TTAGGGGCGGGATGTCACTCCGAAGTCAGTGCTGTGTACCC < 41bp 0.781495622350041 0.557048528100231 0.9206393 0.71450686 prediction 0.44889418849962 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153614902 chr1:153614905 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_78777 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:153614873-153614908
64251 chr20 39728858 39728858 1 + G A UCEC 39728855 + 39728835 39728875 41 TGCTGAAGAGACGAATCATGCCCGAGGATATAATCATCAAC TGCTGAAGAGACGAATCATGCCCAAGGATATAATCATCAAC < 41bp 0.724446852103238 0.484511906479167 0.14551428 0.03295806 prediction 0.448893704206475 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39728855 chr20:39728858 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_78778 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39728840-39728860
64251 chr20 33080348 33080348 1 + C T GBM 33080345 + 33080325 33080365 41 ATGAGAAGAGAATGAGACTTCTGCAGTTTGTTACTGGAACC ATGAGAAGAGAATGAGACTTCTGTAGTTTGTTACTGGAACC < 41bp 0.724445869364938 0.496985985399528 0.36404505 0.3249731 prediction 0.448891738729876 Functional Loss - ITCH ENSG00000078747 CDS Human protein_coding chr20:33080345 chr20:33080348 stopgain 0.998 1 24 hm5C_associated_SNPs_78780 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:33080315-33080378
64251 chr10 7839117 7839117 1 + C T UCEC 7839115 + 7839095 7839135 41 TGAGAGAGAGCTGAAACCAGCTCGAATATATGGATTGGGAT TGAGAGAGAGCTGAAACCAGCTTGAATATATGGATTGGGAT < 41bp 0.858291363792631 0.633845974610928 0.20061848 0.06163749 prediction 0.448890778363406 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7839115 chr10:7839117 stopgain 0.547 1 23 hm5C_associated_SNPs_78781 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:7839062-7839119
64251 chr3 139075824 139075824 1 + G T COAD 139075821 + 139075801 139075841 41 AACTAACACTGCAGACTTATCAAGAAGCACTCAGTCGCCAT AACTAACACTGCAGACTTATCAATAAGCACTCAGTCGCCAT < 41bp 0.920727914316595 0.696285671627522 0.8674278 0.09722915 prediction 0.448884485378146 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139075821 chr3:139075824 stopgain 0.973 1 24 hm5C_associated_SNPs_78784 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:139075774-139075831
64251 chr3 30713295 30713295 1 + G A SKCM 30713292 + 30713272 30713312 41 AACCTGGGAAACCGGCAAGACGCGGAAGCTCATGGAGTTCA AACCTGGGAAACCGGCAAGACGCAGAAGCTCATGGAGTTCA < 41bp 0.776127840492152 0.551691818324127 0.18163195 0.10011011 prediction 0.448872044336049 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713292 chr3:30713295 nonsynonymous SNV 0.085 1 24 hm5C_associated_SNPs_78785 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:30713271-30713309
64251 chr7 148921513 148921513 1 + C T LUAD 148921511 + 148921491 148921531 41 CAGAACCACCAGCGGCTGCACACGGGCGAGCGGCCTTTCCA CAGAACCACCAGCGGCTGCACATGGGCGAGCGGCCTTTCCA < 41bp 0.724433758920919 0.464762882625876 0.34922147 0.5806366 prediction 0.448867517841839 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921511 chr7:148921513 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_78786 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148921508-148921536
64251 chr1 168014265 168014265 1 + A C READ 168014261 + 168014241 168014281 41 ATCTGAAAAAGCCAAGGAACCAGAAACTTCAGATCAGACTA ATCTGAAAAAGCCAAGGAACCAGACACTTCAGATCAGACTA < 41bp 0.72443018557493 0.310762182648935 0.39015642 0.33188868 prediction 0.448860371149861 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014261 chr1:168014265 nonsynonymous SNV 0.051 0 25 hm5C_associated_SNPs_78789 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:168014253-168014280
64251 chr16 46952655 46952655 1 + G T UCEC 46952652 + 46952632 46952672 41 GCCTCCTTCCACTCCACCTCCAAGGGCTACATGGGCGAGTA GCCTCCTTCCACTCCACCTCCAATGGCTACATGGGCGAGTA < 41bp 0.724430016483883 0.319123312016021 0.86930585 0.6649226 prediction 0.448860032967767 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46952652 chr16:46952655 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_78790 0 0 5 FUS POSTAR2 SRX029328 chr16:46952628-46952655
64251 chr17 40647696 40647696 1 + G T GBM 40647694 + 40647674 40647714 41 ACAGCTGAACCCAGCCCTCCCTGGAGTGTTTGGTGGACCAT ACAGCTGAACCCAGCCCTCCCTTGAGTGTTTGGTGGACCAT < 41bp 0.88693510507751 0.662505759909745 0.3205803 0.0123232305 prediction 0.44885869033553 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40647694 chr17:40647696 stopgain 0.966 1 23 hm5C_associated_SNPs_78791 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:40647651-40647712
64251 chr10 23409753 23409753 1 + A C LUAD 23409752 + 23409732 23409772 41 AATGGTCAGAGGTTTTGCATCAACAGTGTGGCTTTGAAGTT AATGGTCAGAGGTTTTGCATCCACAGTGTGGCTTTGAAGTT < 41bp 0.784240186179498 0.559813056966578 0.06368968 0.041542143 prediction 0.44885425842584 Functional Loss - MSRB2 ENSG00000148450 CDS Human protein_coding chr10:23409752 chr10:23409753 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_78793 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:23409708-23409753
64251 chr1 90473123 90473123 1 + T C UCEC 90473122 + 90473102 90473142 41 CTCCCGTTCAAAATTGAGGCCTGGGTTTATGGAGGACAGAG CTCCCGTTCAAAATTGAGGCCCGGGTTTATGGAGGACAGAG < 41bp 0.724425040817078 0.4892804870015 0.08689329 0.19538715 prediction 0.448850081634156 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90473122 chr1:90473123 synonymous SNV . 0 22 hm5C_associated_SNPs_78794 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:90473110-90473138
64251 chr9 4662369 4662369 1 + A C rs301487 4662365 + 4662345 4662385 41 CCAGGTCCCGGGATCCGGGCCGCCAGCTGCGATGCCAAGTC CCAGGTCCCGGGATCCGGGCCGCCCGCTGCGATGCCAAGTC < 41bp 0.823824782221904 0.599401198372278 0.8957325 0.09874961 prediction 0.448847167699252 Functional Loss - PLPP6 ENSG00000205808 UTR5 Human protein_coding chr9:4662365 chr9:4662369 . . 0 25 hm5C_associated_SNPs_78795 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:4662368-4662369
64251 chr17 26686008 26686008 1 + C T SKCM 26686005 + 26685985 26686025 41 TCTCCCAGAGGTTGTGAAGCCTCCACGGGTATGTAAGGGAT TCTCCCAGAGGTTGTGAAGCCTCTACGGGTATGTAAGGGAT < 41bp 0.775425272377132 0.551012731215628 0.9357729 0.59826887 prediction 0.448825082323008 Functional Loss - TMEM199 ENSG00000244045 CDS Human protein_coding chr17:26686005 chr17:26686008 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_78803 0 0 1 PRPF8 POSTAR2 ENCODE chr17:26685907-26686054
64251 chr11 118245629 118245629 1 + G A UCEC 118245626 + 118245606 118245646 41 AACAGTTCATGGCTCAGTTCCACGAAAAGATCTACCAGATG AACAGTTCATGGCTCAGTTCCACAAAAAGATCTACCAGATG < 41bp 0.724564854745006 0.500157328836645 0.049940497 0.030915141 prediction 0.448815051816721 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118245626 chr11:118245629 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_78806 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:118245622-118245664
64251 chr4 6698726 6698726 1 + C T COAD 6698724 + 6698704 6698744 41 ATAGTGTTCGTGGCTGCAATCACGTCTGCCTGTCACAAGTA ATAGTGTTCGTGGCTGCAATCATGTCTGCCTGTCACAAGTA < 41bp 0.821758583379187 0.597356200406184 0.29216847 0.29153728 prediction 0.448804765946005 Functional Loss - S100P ENSG00000163993 CDS Human protein_coding chr4:6698724 chr4:6698726 nonsynonymous SNV 0.230 1 23 hm5C_associated_SNPs_78808 0 0 5 DDX55 POSTAR2 ENCODE chr4:6698652-6698759
64251 chr12 113629502 113629502 1 + G A TGCT 113629499 + 113629479 113629519 41 CCTCAGGATCTCAGGCCTTCCACGTCAGGGGTGACCTTCCG CCTCAGGATCTCAGGCCTTCCACATCAGGGGTGACCTTCCG < 41bp 0.767459523754608 0.543057937588019 0.15536842 0.14205539 prediction 0.448803172333178 Functional Loss - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629499 chr12:113629502 synonymous SNV . 0 24 hm5C_associated_SNPs_78810 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:113629485-113629532
64251 chr6 159006392 159006392 1 + G A UCEC 159006389 + 159006369 159006409 41 TTAAAGTCGATGGTGTAGCTCAAGATGGAACCACGATGTAC TTAAAGTCGATGGTGTAGCTCAAAATGGAACCACGATGTAC < 41bp 0.724385169788161 0.48789585150014 0.2518736 0.052137226 prediction 0.448770339576322 Functional Loss - TMEM181 ENSG00000146433 CDS Human protein_coding chr6:159006389 chr6:159006392 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_78823 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:159006377-159006403
64251 chr10 82185667 82185667 1 + G T LUSC 82185664 + 82185644 82185684 41 TGAAAAGCATGTTGGACCAGCTGGGCGTCCCCCTCTATGCA TGAAAAGCATGTTGGACCAGCTGTGCGTCCCCCTCTATGCA < 41bp 0.724382221309859 0.31291764393555 0.38194925 0.06425217 prediction 0.448764442619718 Functional Loss - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82185664 chr10:82185667 nonsynonymous SNV 0.526 4 24 hm5C_associated_SNPs_78826 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:82185654-82185676
64251 chrX 153678268 153678268 1 + G A LUSC 153678265 + 153678245 153678285 41 CGACTTCATCGTCACCAAGGCACGGGGGAAGAGTGGTGAGT CGACTTCATCGTCACCAAGGCACAGGGGAAGAGTGGTGAGT < 41bp 0.785997860743443 0.561617276658262 0.2681507 0.121495694 prediction 0.448761168170361 Functional Loss - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678265 chrX:153678268 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_78827 0 0 2 PRPF8 POSTAR2 ENCODE chrX:153678200-153678279
64251 chr1 156180113 156180113 1 + C T BLCA 156180111 + 156180091 156180131 41 TGGGGCCTCATGAAGGGCCTCTCGGCCAGAATCATCTCAGC TGGGGCCTCATGAAGGGCCTCTTGGCCAGAATCATCTCAGC < 41bp 0.724377229612771 0.450183507486198 0.42106047 0.13375738 prediction 0.448754459225543 Functional Loss - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156180111 chr1:156180113 nonsynonymous SNV 0.940 3 23 hm5C_associated_SNPs_78829 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:156180095-156180119
64251 chr6 38120150 38120150 1 + G A LGG 38120147 + 38120127 38120167 41 GGGCGCTCCTGCCAGCGCATCGGGGAGGGGTGCTCCTGAAG GGGCGCTCCTGCCAGCGCATCGGAGAGGGGTGCTCCTGAAG < 41bp 0.783272192023339 0.558897889626194 0.93155044 0.90913135 prediction 0.448748604794289 Functional Loss - ZFAND3 ENSG00000156639 CDS Human protein_coding chr6:38120147 chr6:38120150 synonymous SNV . 0 24 hm5C_associated_SNPs_78831 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr6:38120143-38120167
64251 chr4 8477525 8477525 1 + G A UCEC 8477522 + 8477502 8477542 41 TGAATGGGAGAGTTCACATCCGCGACTGGCGAGAGGAGACA TGAATGGGAGAGTTCACATCCGCAACTGGCGAGAGGAGACA < 41bp 0.724373986845034 0.496198604445672 0.1950784 0.12270501 prediction 0.448747973690068 Functional Loss - TRMT44 ENSG00000155275 CDS Human protein_coding chr4:8477522 chr4:8477525 nonsynonymous SNV 0.867 1 24 hm5C_associated_SNPs_78832 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:8477518-8477553
64251 chr5 44815042 44815042 1 + G A UCEC 44815039 + 44815019 44815059 41 CTGGAGTGAAGCAGATGTTACTCGACCTTTTGTCTCCCAGG CTGGAGTGAAGCAGATGTTACTCAACCTTTTGTCTCCCAGG < 41bp 0.767407515245691 0.54304243410263 0.37879288 0.5198276 prediction 0.448730162286122 Functional Loss - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44815039 chr5:44815042 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_78841 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:44815019-44815054
64251 chr11 63671487 63671487 1 + C T STAD 63671485 + 63671465 63671505 41 ATGCCAGGGTCCCGGGCCTCCACGGCTTCTGCTTCTGCCGC ATGCCAGGGTCCCGGGCCTCCATGGCTTCTGCTTCTGCCGC < 41bp 0.82017285986273 0.595808445874562 0.5773162 0.6379398 prediction 0.448728827976335 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63671485 chr11:63671487 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_78842 0 0 1 QKI POSTAR2 ENCODE chr11:63671441-63671505
64251 chr7 152550654 152550654 1 + G A BRCA 152550651 + 152550631 152550671 41 TGTGGTTCGGAGGCTCCATGCTGGCCTCGACTGTAAGTCCC TGTGGTTCGGAGGCTCCATGCTGACCTCGACTGTAAGTCCC < 41bp 0.724355817500479 0.478172242062516 0.38812098 0.1154165 prediction 0.448711635000958 Functional Loss - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152550651 chr7:152550654 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_78848 0 0 2 PRPF8 POSTAR2 ENCODE chr7:152550653-152550703
64251 chr16 11772464 11772464 1 + G C rs553453502 11772460 + 11772440 11772480 41 CCCTGGTGCCAGGGACGTACCTGGGAGTTTGAATCAGGCCC CCCTGGTGCCAGGGACGTACCTGGCAGTTTGAATCAGGCCC < 41bp 0.807610694337982 0.583256887524136 0.8698157 0.34336632 prediction 0.448707613627692 Functional Loss - SNN ENSG00000184602 UTR3 Human protein_coding chr16:11772460 chr16:11772464 . . 0 25 hm5C_associated_SNPs_78850 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:11772431-11772466
64251 chr11 111945510 111945510 1 + G C rs551249421 111945509 + 111945489 111945529 41 GTGGGAAGGCTGCGTTTTCACGAAGGACTCGGGTGAAGCTG GTGGGAAGGCTGCGTTTTCACCAAGGACTCGGGTGAAGCTG < 41bp 0.819742701066677 0.595390400957629 0.89760816 0.5140507 prediction 0.448704600218096 Functional Loss - C11orf57 ENSG00000150776 UTR5 Human protein_coding chr11:111945509 chr11:111945510 . . 0 22 hm5C_associated_SNPs_78852 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:111945484-111945540
64251 chr6 131971248 131971248 1 + G C KIRC 131971244 + 131971224 131971264 41 GTGATGTGGCATGTAAAGACCGAGGTGATTGCTGCTGGGAT GTGATGTGGCATGTAAAGACCGAGCTGATTGCTGCTGGGAT < 41bp 0.724348785945184 0.429846987560095 0.88662624 0.5078205 prediction 0.448697571890369 Functional Loss - ENPP3 ENSG00000154269 CDS Human protein_coding chr6:131971244 chr6:131971248 nonsynonymous SNV 0.558 2 25 hm5C_associated_SNPs_78853 0 0 7 BUD13 POSTAR2 ENCODE chr6:131971184-131971292
64251 chr21 44324289 44324289 1 + C T HNSC 44324287 + 44324267 44324307 41 CAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAAAGACA CAGTTCCTGTTGAGAATAACCATGGTTTCCATGAAAAGACA < 41bp 0.724344268148434 0.467617206460049 0.40367442 0.29801023 prediction 0.448688536296867 Functional Loss - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324287 chr21:44324289 synonymous SNV . 0 23 hm5C_associated_SNPs_78854 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr21:44324280-44324300
64251 chr21 44324290 44324290 1 + G T UCEC 44324287 + 44324267 44324307 41 CAGTTCCTGTTGAGAATAACCACGGTTTCCATGAAAAGACA CAGTTCCTGTTGAGAATAACCACTGTTTCCATGAAAAGACA < 41bp 0.724344268148434 0.336466973384601 0.40367442 0.18090531 prediction 0.448688536296867 Functional Loss - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324287 chr21:44324290 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_78855 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr21:44324280-44324300
64251 chr6 26157095 26157095 1 + G C STAD 26157091 + 26157071 26157111 41 CAAGAAGACCCCAAAGAAGGCGAAGAAGCCGGCTGCAGCTG CAAGAAGACCCCAAAGAAGGCGAACAAGCCGGCTGCAGCTG < 41bp 0.724340389729213 0.436737718888187 0.37150204 0.26515195 prediction 0.448680779458426 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26157091 chr6:26157095 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_78857 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156940-26157180
64251 chr2 10192466 10192466 1 + G A rs550244177 10192463 + 10192443 10192483 41 GGGGAGAAGAAGTTTGTGTGCCCGGTGTGTGACCGACGTTT GGGGAGAAGAAGTTTGTGTGCCCAGTGTGTGACCGACGTTT < 41bp 0.724336414828108 0.481119798474418 0.25706905 0.083899885 prediction 0.448672829656217 Functional Loss - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10192463 chr2:10192466 synonymous SNV . 0 24 hm5C_associated_SNPs_78858 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:10192449-10192484
64251 chr2 85604584 85604584 1 + G A CESC 85604581 + 85604561 85604601 41 GCAGGAGATTTTCCGCCTGTCTCGTCACCACATCCAGGTGA GCAGGAGATTTTCCGCCTGTCTCATCACCACATCCAGGTGA < 41bp 0.724325446526817 0.483452541936086 0.37131384 0.22339591 prediction 0.448650893053633 Functional Loss - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85604581 chr2:85604584 nonsynonymous SNV 0.958 0 24 hm5C_associated_SNPs_78865 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:85604569-85604595
64251 chr2 172841177 172841177 1 + G A COAD 172841174 + 172841154 172841194 41 TCAAGATTTGCCCTGTTTTTCCCGGGAAAAATTAATGCAAG TCAAGATTTGCCCTGTTTTTCCCAGGAAAAATTAATGCAAG < 41bp 0.736222629759234 0.511897941512357 0.911006 0.35264108 prediction 0.448649376493753 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172841174 chr2:172841177 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_78866 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:172841156-172841181
64251 chr1 201798356 201798356 1 + G T SARC 201798354 + 201798334 201798374 41 AAAGATGGCGGCGGCGGCGGCAGCTGGTGCGGCCTCCGGGC AAAGATGGCGGCGGCGGCGGCATCTGGTGCGGCCTCCGGGC < 41bp 0.724324248323211 0.376388032861634 0.92177105 0.9127612 prediction 0.448648496646421 Functional Loss - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201798354 chr1:201798356 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_78867 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:201798340-201798360
64251 chr11 63995065 63995065 1 + A C SKCM 63995064 + 63995044 63995084 41 TGTGCCCTGGTGGCAGCCCCCAGCACCAGGACCTCGCTGGG TGTGCCCTGGTGGCAGCCCCCCGCACCAGGACCTCGCTGGG < 41bp 0.811141350100152 0.586817735172009 0.47013637 0.27681452 prediction 0.448647229856285 Functional Loss - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63995064 chr11:63995065 nonsynonymous SNV 0.976 0 22 hm5C_associated_SNPs_78869 0 0 1 DDX55 POSTAR2 ENCODE chr11:63995040-63995201
64251 chr6 26020742 26020742 1 + C T LUAD 26020740 + 26020720 26020760 41 GGCTCGCACTAAGCAAACTGCTCGGAAGTCTACTGGTGGCA GGCTCGCACTAAGCAAACTGCTTGGAAGTCTACTGGTGGCA < 41bp 0.771157407658009 0.546838285163641 0.24837747 0.16046977 prediction 0.448638244988735 Functional Loss - HIST1H3A ENSG00000198366 CDS Human other chr6:26020740 chr6:26020742 nonsynonymous SNV 0.111 1 23 hm5C_associated_SNPs_78870 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:26020694-26020761
64251 chr12 57944160 57944160 1 + G A BRCA 57944157 + 57944137 57944177 41 ACAAGTTCATCCCCATTTTCCAAGGGGACGACAGCGTCGTT ACAAGTTCATCCCCATTTTCCAAAGGGACGACAGCGTCGTT < 41bp 0.772776921121962 0.548461565550299 0.93769884 0.91702986 prediction 0.448630711143325 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57944157 chr12:57944160 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_78873 0 0 2 RBM15 POSTAR2 ENCODE chr12:57944152-57944201
64251 chr12 54423739 54423739 1 + A C LUAD 54423735 + 54423715 54423755 41 AAGAGACAGAAGAGGAGAAGCAGAAAGAGTGACCAGGACTG AAGAGACAGAAGAGGAGAAGCAGACAGAGTGACCAGGACTG < 41bp 0.724304759355094 0.331664914490478 0.3912001 0.21979827 prediction 0.448609518710188 Functional Loss - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54423735 chr12:54423739 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_78878 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:54423739-54423768
64251 chr8 136561054 136561054 1 + C T LUSC 136561051 + 136561031 136561071 41 ACTTCCATCTCAATGATGATCTCCATGTTCTCATTGAAGTG ACTTCCATCTCAATGATGATCTCTATGTTCTCATTGAAGTG < 41bp 0.724298827106795 0.491445093069631 0.94371355 0.8879949 prediction 0.448597654213591 Functional Loss - KHDRBS3 ENSG00000131773 CDS Human protein_coding chr8:136561051 chr8:136561054 nonsynonymous SNV 0.967 4 24 hm5C_associated_SNPs_78879 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:136561024-136561057
64251 chr17 2265068 2265068 1 + G A UCEC 2265065 + 2265045 2265085 41 GGGAGATTTGCCACAAGGTACAGGAGCTGCAGCAACAAGCA GGGAGATTTGCCACAAGGTACAGAAGCTGCAGCAACAAGCA < 41bp 0.724298351177009 0.47575710000619 0.6276052 0.4519303 prediction 0.448596702354018 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2265065 chr17:2265068 nonsynonymous SNV 0.988 2 24 hm5C_associated_SNPs_78880 0 0 4 BUD13 POSTAR2 ENCODE chr17:2265002-2265093
64251 chr3 141497156 141497156 1 + G A CESC 141497153 + 141497133 141497173 41 GACATGGGGGCCCTGGACAACCTGATCGCCAACACCGCCTA GACATGGGGGCCCTGGACAACCTAATCGCCAACACCGCCTA < 41bp 0.765826277500807 0.541538309374751 0.081976056 0.12194514 prediction 0.448575936252112 Functional Loss - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141497153 chr3:141497156 synonymous SNV . 0 24 hm5C_associated_SNPs_78887 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141497156-141497199
64251 chr14 67850087 67850087 1 + T C PRAD 67850086 + 67850066 67850106 41 TTGCGAGGCAGATGGAGAGGCTTGAAAGAGAAAATGCCGAA TTGCGAGGCAGATGGAGAGGCCTGAAAGAGAAAATGCCGAA < 41bp 0.724283426160375 0.48420483592877 0.53011715 0.56626403 prediction 0.44856685232075 Functional Loss - EIF2S1 ENSG00000134001 CDS Human protein_coding chr14:67850086 chr14:67850087 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_78889 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:67850038-67850089
64251 chr17 2923829 2923829 1 + C T STAD 2923827 + 2923807 2923847 41 CGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCCCGCCT CGGAGTCCCATCAAGCGACGCTTGGGGCTCTTCCCCCGCCT < 41bp 0.724276676439254 0.443908613861105 0.7594757 0.77972865 prediction 0.448553352878508 Functional Loss - RAP1GAP2 ENSG00000132359 CDS Human protein_coding chr17:2923827 chr17:2923829 nonsynonymous SNV 0.947 4 23 hm5C_associated_SNPs_78892 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:2923823-2923844
64251 chr12 105536926 105536926 1 + G A rs181933198 105536923 + 105536903 105536943 41 AGTACATGTTCAGTGCTTTGCGCGACTGTGTACCTGCTATG AGTACATGTTCAGTGCTTTGCGCAACTGTGTACCTGCTATG < 41bp 0.743365131135622 0.519091874727856 0.114290684 0.04789284 prediction 0.448546512815532 Functional Loss - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105536923 chr12:105536926 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_78895 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:105536913-105536929
64251 chr1 201489297 201489297 1 + G T UCEC 201489294 + 201489274 201489314 41 AAGCACCCGGAGCTGGCAGACAAGAATGCGCCCAACCTTCG AAGCACCCGGAGCTGGCAGACAATAATGCGCCCAACCTTCG < 41bp 0.914691514308806 0.690420887319595 0.17628223 0.23748541 prediction 0.448541253978422 Functional Loss - RPS10P7 ENSG00000223396;ENSG00000242150 ncRNA_exonic Human other chr1:201489294 chr1:201489297 . . 0 24 hm5C_associated_SNPs_78897 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:201489276-201489313
64251 chr12 132425853 132425853 1 + G A COAD 132425850 + 132425830 132425870 41 CCCCTAGGACTGAAGCGGGTCACGGGCGGGTTTAACTCCAA CCCCTAGGACTGAAGCGGGTCACAGGCGGGTTTAACTCCAA < 41bp 0.724262985959659 0.492469556297243 0.8914266 0.8942829 prediction 0.448525971919319 Functional Loss - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132425850 chr12:132425853 synonymous SNV . 0 24 hm5C_associated_SNPs_78903 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:132425840-132425860
64251 chr21 45876632 45876632 1 + G T LGG 45876630 + 45876610 45876650 41 ACCTGGGCGCCGCCTGCCCACAGCCCTGCCGGTGCCCTGAC ACCTGGGCGCCGCCTGCCCACATCCCTGCCGGTGCCCTGAC < 41bp 0.72425887187073 0.369586865493275 0.24189764 0.10670996 prediction 0.44851774374146 Functional Loss - LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876630 chr21:45876632 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_78908 0 0 2 DDX3X POSTAR2 ENCODE chr21:45876589-45876646
64251 chr16 30594463 30594463 1 - G A COAD 30594465 - 30594445 30594485 41 GTCAGGCGCGTTTCTCCCAGCGCAGGTACCTGCTCCAGCAT GTCAGGCGCGTTTCTCCCAGCGTAGGTACCTGCTCCAGCAT < 41bp 0.766724032513469 0.542470655749183 0.42193952 0.40554017 prediction 0.44850675352857 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594465 chr16:30594463 synonymous SNV . 0 23 hm5C_associated_SNPs_78910 0 0 1 GEMIN5 POSTAR2 ENCODE chr16:30594413-30594487
64251 chr3 38182689 38182689 1 + T C UCS 38182688 + 38182668 38182708 41 AGAAAGAGTTCCCCAGCATCCTGAGGTTCATCACTGTCTGC AGAAAGAGTTCCCCAGCATCCCGAGGTTCATCACTGTCTGC < 41bp 0.752191745125112 0.527943789434419 0.1399793 0.2650611 prediction 0.448495911381386 Functional Loss - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38182688 chr3:38182689 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_78912 0 0 2 GRWD1 POSTAR2 ENCODE chr3:38182672-38182746
64251 chr1 179035954 179035954 1 + G A UCEC 179035951 + 179035931 179035971 41 TCAGCTTTGGGAACCCCTCGCTGGATGAAAGAAGCATTCTT TCAGCTTTGGGAACCCCTCGCTGAATGAAAGAAGCATTCTT < 41bp 0.724239125887862 0.492575959749229 0.29369247 0.058639467 prediction 0.448478251775724 Functional Loss - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179035951 chr1:179035954 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_78919 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:179035932-179035960
64251 chr19 14512260 14512260 1 + A T rs16979636 14512256 + 14512236 14512276 41 TGGAGACGTAGAGGCCCTGGCGCCACCTGTCCGGCACCTCA TGGAGACGTAGAGGCCCTGGCGCCTCCTGTCCGGCACCTCA < 41bp 0.724238373094461 0.379148918575157 0.27539825 0.1145919 prediction 0.448476746188923 Functional Loss - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512256 chr19:14512260 synonymous SNV . 0 25 hm5C_associated_SNPs_78920 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:14512228-14512263
64251 chrX 100880053 100880053 1 + T C LUSC 100880052 + 100880032 100880072 41 CTATTGCATTTATAGACTGACTAGGGGAAGAAAACAGAACA CTATTGCATTTATAGACTGACCAGGGGAAGAAAACAGAACA < 41bp 0.748181948715471 0.523943684435315 0.26402372 0.42960262 prediction 0.448476528560312 Functional Loss - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880052 chrX:100880053 synonymous SNV . 0 22 hm5C_associated_SNPs_78921 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:100880041-100880071
64251 chr9 21854706 21854706 1 + G A UCEC 21854703 + 21854683 21854723 41 AATGGTCACAATCGAGGGACCTCGTTTTAGCTCCCGGGCAG AATGGTCACAATCGAGGGACCTCATTTTAGCTCCCGGGCAG < 41bp 0.745178669935702 0.520940456533074 0.07630178 0.04710713 prediction 0.448476426805257 Functional Loss - MTAP ENSG00000099810 CDS Human protein_coding chr9:21854703 chr9:21854706 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_78922 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:21854693-21854723
64251 chr16 77227572 77227572 1 + C T COAD 77227570 + 77227550 77227590 41 GGCTGGCAAGCCCATCTACTCGCGGTATGGTAGTGTGGAGG GGCTGGCAAGCCCATCTACTCGTGGTATGGTAGTGTGGAGG < 41bp 0.818320698604384 0.594088243062693 0.80407095 0.88072544 prediction 0.448464911083381 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77227570 chr16:77227572 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_78926 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:77227559-77227578
64251 chr4 952241 952241 1 + G A SKCM 952238 + 952218 952258 41 ACACCCCCCGCCAGCCCCCACGGGCCAGGACGACCCACAGT ACACCCCCCGCCAGCCCCCACGGACCAGGACGACCCACAGT < 41bp 0.782962659385391 0.558738438724358 0.90689456 0.41183883 prediction 0.448448441322065 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:952238 chr4:952241 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_78928 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:952216-952287
64251 chr12 93771740 93771740 1 + G C rs540625370 93771736 + 93771716 93771756 41 GCTGCTCAGTGGGAGCGGGTCTTCGCAACTGTCTCCGCGTG GCTGCTCAGTGGGAGCGGGTCTTCCCAACTGTCTCCGCGTG < 41bp 0.724223956109192 0.441604595795523 0.33010685 0.28516844 prediction 0.448447912218383 Functional Loss - NUDT4P2 ENSG00000173598 UTR5 Human protein_coding chr12:93771736 chr12:93771740 . . 0 25 hm5C_associated_SNPs_78929 0 0 1 GEMIN5 POSTAR2 ENCODE chr12:93771699-93771744
64251 chr13 113783900 113783900 1 + G A UCEC 113783897 + 113783877 113783917 41 CCTGCTCATACGAAGAGGCCCGCGAGGTCTTTGAGGACAGC CCTGCTCATACGAAGAGGCCCGCAAGGTCTTTGAGGACAGC < 41bp 0.786574146275446 0.562351556198153 0.35665125 0.13850182 prediction 0.448445180154586 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113783897 chr13:113783900 nonsynonymous SNV 0.068 5 24 hm5C_associated_SNPs_78930 0 0 2 GRWD1 POSTAR2 ENCODE chr13:113783869-113783901
64251 chr14 75348709 75348709 1 + C T HNSC 75348707 + 75348687 75348727 41 GCGTTCAGCCGCTCGCTCTCCGCCTTCCAGAAGGTACGGTC GCGTTCAGCCGCTCGCTCTCCGTCTTCCAGAAGGTACGGTC < 41bp 0.724218747989023 0.480235620498154 0.32835782 0.3017099 prediction 0.448437495978046 Functional Loss - DLST ENSG00000119689 CDS Human protein_coding chr14:75348707 chr14:75348709 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_78932 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:75348689-75348716
64251 chr12 94072723 94072723 1 + T C COAD 94072722 + 94072702 94072742 41 TCCGGAAAACAATGCTCCTGCTGGATATCCTACCTTCCAGG TCCGGAAAACAATGCTCCTGCCGGATATCCTACCTTCCAGG < 41bp 0.782998907499691 0.5587834964411 0.2731641 0.36035264 prediction 0.44843082211718 Functional Loss - CRADD ENSG00000169372 CDS Human protein_coding chr12:94072722 chr12:94072723 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_78934 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:94072720-94072740
64251 chr22 38355455 38355455 1 + G A COAD 38355452 + 38355432 38355472 41 TGACCAAGTACGAGCGAGCCCGCGTGCTGGGCACCCGAGCG TGACCAAGTACGAGCGAGCCCGCATGCTGGGCACCCGAGCG < 41bp 0.799068230275769 0.57485951808654 0.4208135 0.32821193 prediction 0.448417424378459 Functional Loss - POLR2F ENSG00000100142 CDS Human protein_coding chr22:38355452 chr22:38355455 nonsynonymous SNV 0.972 4 24 hm5C_associated_SNPs_78939 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38355416-38355478
64251 chr10 126673379 126673379 1 + G C LUSC 126673375 + 126673355 126673395 41 GAACAGCAAGAAAAACTGCTCAGGGAGTGGCTGGACTGCTG GAACAGCAAGAAAAACTGCTCAGGCAGTGGCTGGACTGCTG < 41bp 0.840651554139763 0.61644396779335 0.9319116 0.9075847 prediction 0.448415172692827 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126673375 chr10:126673379 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_78941 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr10:126673360-126673400
64251 chr1 26606424 26606424 1 + G A rs186537648 26606421 + 26606401 26606441 41 TGCGTGGGACGGGTCCGTTGCGCGCCTGGTAACCGAGGGGG TGCGTGGGACGGGTCCGTTGCGCACCTGGTAACCGAGGGGG < 41bp 0.743090785364615 0.518885843706453 0.21948859 0.11559224 prediction 0.448409883316325 Functional Loss - SH3BGRL3 ENSG00000142669 UTR5 Human protein_coding chr1:26606421 chr1:26606424 . . 0 24 hm5C_associated_SNPs_78944 0 0 1 SF3B1 POSTAR2 ENCODE chr1:26606422-26606455
64251 chr2 112751928 112751928 1 + G A rs7604639 112751925 + 112751905 112751945 41 AGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTGGGCCCT AGTGAGGATTGCAGCCGTCACCAAAGGGGGAGTTGGGCCCT < 41bp 0.800752487858743 0.576550840734109 0.90479666 0.6479682 prediction 0.448403294249267 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112751925 chr2:112751928 nonsynonymous SNV 0.328 0 24 hm5C_associated_SNPs_78947 1 0 1 GRWD1 POSTAR2 ENCODE chr2:112751900-112751943
64251 chr19 15224460 15224460 1 + G A COAD 15224457 + 15224437 15224477 41 TGCACCTGCCGCTGGCAGACCCCGAAGTGGTGACTCGGCCC TGCACCTGCCGCTGGCAGACCCCAAAGTGGTGACTCGGCCC < 41bp 0.724200328267926 0.471359698917139 0.3553964 0.33536214 prediction 0.448400656535853 Functional Loss - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15224457 chr19:15224460 nonsynonymous SNV 0.787 0 24 hm5C_associated_SNPs_78948 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:15224447-15224488
64251 chr6 74201964 74201964 1 + G A COAD 74201961 + 74201941 74201981 41 TTTCATATATTTGCAGAGCTCTCGATGTTCTGAAGTATGAG TTTCATATATTTGCAGAGCTCTCAATGTTCTGAAGTATGAG < 41bp 0.725059356521595 0.500876678513841 0.60501456 0.11542195 prediction 0.448365356015508 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74201961 chr6:74201964 nonsynonymous SNV 0.968 2 24 hm5C_associated_SNPs_78956 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:74201960-74201980
64251 chr20 61919087 61919087 1 + G A COAD 61919084 + 61919064 61919104 41 ACCTCCACCGAGAGGAGGAGCTCGGACAGCTGGGAGGTGTG ACCTCCACCGAGAGGAGGAGCTCAGACAGCTGGGAGGTGTG < 41bp 0.750687112200589 0.526507352032937 0.9062197 0.88893485 prediction 0.448359520335303 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919084 chr20:61919087 synonymous SNV . 0 24 hm5C_associated_SNPs_78958 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:61919061-61919087
64251 chr12 56863068 56863068 1 + C T rs117958275 56863066 + 56863046 56863086 41 AGTGGCAGATGTGGACATGTCCCGGGATAGCTGCATTGGTG AGTGGCAGATGTGGACATGTCCTGGGATAGCTGCATTGGTG < 41bp 0.82049321669833 0.596314667155701 0.46123633 0.5304643 prediction 0.448357099085259 Functional Loss - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863066 chr12:56863068 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_78959 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:56863031-56863074
64251 chr14 24884896 24884896 1 + G A UCEC 24884893 + 24884873 24884913 41 GTTCGTCTGCATCCACATGTCGGGCTACTGCTTCTACCGTG GTTCGTCTGCATCCACATGTCGGACTACTGCTTCTACCGTG < 41bp 0.724172799877687 0.469067589389398 0.73558116 0.23168278 prediction 0.448345599755374 Functional Loss - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884893 chr14:24884896 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_78961 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:24884886-24884916
64251 chr12 122079119 122079119 1 + C T UCEC 122079117 + 122079097 122079137 41 AGCAACGTGCACAATCTCAACTCGGTCAAGGAGTCCCCCCA AGCAACGTGCACAATCTCAACTTGGTCAAGGAGTCCCCCCA < 41bp 0.80071119764817 0.57654046689494 0.20945227 0.20117038 prediction 0.448341461506459 Functional Loss - ORAI1 ENSG00000182500 CDS Human other chr12:122079117 chr12:122079119 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_78964 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122079094-122079120
64251 chr19 8431137 8431137 1 + C T BLCA 8431135 + 8431115 8431155 41 CCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCG CCATGAGGTGGCCAAGCCTGCCTGAAGAAAGAGGCTGCCCG < 41bp 0.724167273936517 0.458468687253172 0.074863315 0.06861383 prediction 0.448334547873033 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8431135 chr19:8431137 stopgain 0.033 0 23 hm5C_associated_SNPs_78965 0 0 2 PPIG POSTAR2 ENCODE chr19:8431099-8431159
64251 chr19 8431138 8431138 1 + G A UCEC 8431135 + 8431115 8431155 41 CCATGAGGTGGCCAAGCCTGCCCGAAGAAAGAGGCTGCCCG CCATGAGGTGGCCAAGCCTGCCCAAAGAAAGAGGCTGCCCG < 41bp 0.724167273936517 0.479202884844098 0.074863315 0.028821707 prediction 0.448334547873033 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8431135 chr19:8431138 nonsynonymous SNV 0.036 0 24 hm5C_associated_SNPs_78966 0 0 2 PPIG POSTAR2 ENCODE chr19:8431099-8431159
64251 chr16 58540489 58540489 1 + G A UCEC 58540486 + 58540466 58540506 41 CCGGCCTAACTAGCACTTTACCCGACACGGTGCTCTCCCAC CCGGCCTAACTAGCACTTTACCCAACACGGTGCTCTCCCAC < 41bp 0.724166990587702 0.478655227773146 0.13117626 0.220341 prediction 0.448333981175404 Functional Loss - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58540486 chr16:58540489 nonsynonymous SNV 0.519 3 24 hm5C_associated_SNPs_78967 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:58540480-58540511
64251 chr1 46739130 46739130 1 + G T SARC 46739128 + 46739108 46739148 41 GCTCTAAGGCCCTGGAGCCCCAGCTGTCAGGTGACCCTTTT GCTCTAAGGCCCTGGAGCCCCATCTGTCAGGTGACCCTTTT < 41bp 0.724164035192442 0.370533400853864 0.42545733 0.07902166 prediction 0.448328070384883 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739128 chr1:46739130 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_78969 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46739127-46739145
64251 chr8 90770311 90770311 1 + G T SARC 90770309 + 90770289 90770329 41 ATGAACGGGGAGGCCATCTGCAGCGCCCTGCCCACCATTCC ATGAACGGGGAGGCCATCTGCATCGCCCTGCCCACCATTCC < 41bp 0.911053978714172 0.686900841948275 0.81535006 0.18444636 prediction 0.448306273531794 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90770309 chr8:90770311 nonsynonymous SNV 0.715 1 23 hm5C_associated_SNPs_78976 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:90770310-90770346
64251 chr6 143793363 143793363 1 + C T COAD 143793361 + 143793341 143793381 41 AACTAAAAGAAATCAGAAATCTCGTTGAGCAGCATAAGTCT AACTAAAAGAAATCAGAAATCTTGTTGAGCAGCATAAGTCT < 41bp 0.724140147512091 0.44000845431216 0.46476328 0.34955502 prediction 0.448280295024183 Functional Loss - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143793361 chr6:143793363 synonymous SNV . 0 23 hm5C_associated_SNPs_78981 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:143793358-143793374
64251 chr22 29383151 29383151 1 + G T UCEC 29383149 + 29383129 29383169 41 AGTGGTGAAGCTGGAACAGCCAGAATTGGACCCGAAACCAT AGTGGTGAAGCTGGAACAGCCATAATTGGACCCGAAACCAT < 41bp 0.724129214728163 0.374991834434282 0.44624686 0.3295158 prediction 0.448258429456327 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29383149 chr22:29383151 stopgain 1.000 1 23 hm5C_associated_SNPs_78986 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:29383151-29383152
64251 chr19 3463848 3463848 1 + A C rs540624959 3463847 + 3463827 3463867 41 TGGTTTAAGTGCCTGATTACCACCACCCGCCCCCCCCTTTG TGGTTTAAGTGCCTGATTACCCCCACCCGCCCCCCCCTTTG < 41bp 0.724128006881773 0.474897430083615 0.032521456 0.06294909 prediction 0.448256013763546 Functional Loss - NFIC ENSG00000141905 UTR3 Human protein_coding chr19:3463847 chr19:3463848 . . 0 22 hm5C_associated_SNPs_78987 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3463841-3463872
64251 chr6 12124263 12124263 1 + G A UCEC 12124260 + 12124240 12124280 41 GCAGCCTCCATCTTCACCTTCTCGAGTGGGAGTGACTGGGC GCAGCCTCCATCTTCACCTTCTCAAGTGGGAGTGACTGGGC < 41bp 0.781232964991452 0.557110254271019 0.18593925 0.0594894 prediction 0.448245421440865 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12124260 chr6:12124263 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_78989 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:12124243-12124275
64251 chr2 174229714 174229714 1 + G A SKCM 174229711 + 174229691 174229731 41 AGGAAGACCGTGGATGGCTACATGAATGTGAGTTCTCCGCA AGGAAGACCGTGGATGGCTACATAAATGTGAGTTCTCCGCA < 41bp 0.724121059236401 0.486061598479556 0.32497844 0.22045732 prediction 0.448242118472803 Functional Loss - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174229711 chr2:174229714 nonsynonymous SNV 0.156 0 24 hm5C_associated_SNPs_78991 0 0 5 BUD13 POSTAR2 ENCODE chr2:174229674-174229715
64251 chr9 116268707 116268707 1 + C T UCEC 116268705 + 116268685 116268725 41 GCAGGGCTGCAGCAGCTGGACACGGTGCTGCAGCTGAATGA GCAGGGCTGCAGCAGCTGGACATGGTGCTGCAGCTGAATGA < 41bp 0.795516849123489 0.57139700098464 0.19719112 0.16785073 prediction 0.448239696277698 Functional Loss - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116268705 chr9:116268707 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_78992 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:116268699-116268724
64251 chr7 102105566 102105566 1 + G A rs79978502 102105563 + 102105543 102105583 41 GCGCGGCTGCTAATGCAGCGCGGGCGCCCCAAGAGCGACCG GCGCGGCTGCTAATGCAGCGCGGACGCCCCAAGAGCGACCG < 41bp 0.762842082827355 0.538722256531428 0.57882786 0.26649165 prediction 0.448239652591855 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102105563 chr7:102105566 synonymous SNV . 0 24 hm5C_associated_SNPs_78993 0 0 4 DDX3X POSTAR2 ENCODE chr7:102105451-102105604
64251 chr2 113951501 113951501 1 + G A HNSC 113951498 + 113951478 113951518 41 CTGAATGGGCTGAGGGATGGCGGGAACTTCCCCAAGGAGCT CTGAATGGGCTGAGGGATGGCGGAAACTTCCCCAAGGAGCT < 41bp 0.781168100215946 0.557050146941334 0.7453845 0.5713191 prediction 0.448235906549224 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113951498 chr2:113951501 synonymous SNV . 0 24 hm5C_associated_SNPs_78996 0 0 6 BUD13 POSTAR2 ENCODE chr2:113951463-113951520
64251 chr11 111853203 111853203 1 + G T UCEC 111853201 + 111853181 111853221 41 GGAAGCAAAGAAAATGATATCAGGACTACAGGTAGCTCTCT GGAAGCAAAGAAAATGATATCATGACTACAGGTAGCTCTCT < 41bp 0.724116934507381 0.389487190402829 0.9004239 0.09616071 prediction 0.448233869014762 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111853201 chr11:111853203 stopgain 0.996 0 23 hm5C_associated_SNPs_78998 0 0 3 EFTUD2 POSTAR2 ENCODE chr11:111853180-111853246
64251 chr6 10961579 10961579 1 + A T STAD 10961575 + 10961555 10961595 41 GCTTTCAAAATTTGGTTCTTCAAGAGTTGAGCAGTCTTAAG GCTTTCAAAATTTGGTTCTTCAAGTGTTGAGCAGTCTTAAG < 41bp 0.72411067883741 0.403464867308558 0.375475 0.43781295 prediction 0.44822135767482 Functional Loss - SYCP2L ENSG00000153157 CDS Human protein_coding chr6:10961575 chr6:10961579 nonsynonymous SNV 0.868 4 25 hm5C_associated_SNPs_79002 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:10961566-10961588
64251 chr16 68909060 68909060 1 + G A HNSC 68909057 + 68909037 68909077 41 ATCTCTCTCCATTGTGCCAGCGGGAGCAGCTGGTGGAAGTG ATCTCTCTCCATTGTGCCAGCGGAAGCAGCTGGTGGAAGTG < 41bp 0.785086193443114 0.560979705692739 0.91364896 0.86881804 prediction 0.44821297550075 Functional Loss - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68909057 chr16:68909060 nonsynonymous SNV 0.097 2 24 hm5C_associated_SNPs_79003 0 0 6 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:68909060-68909100
64251 chr13 46090388 46090388 1 + G T UCEC 46090385 + 46090365 46090405 41 AAGGAAATTTCCCTGGACCTCAAGAAAACTAGAGGTACTTT AAGGAAATTTCCCTGGACCTCAATAAAACTAGAGGTACTTT < 41bp 0.724103084941969 0.344142074422766 0.55053484 0.32712388 prediction 0.448206169883937 Functional Loss - COG3 ENSG00000136152 CDS Human protein_coding chr13:46090385 chr13:46090388 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_79005 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:46090380-46090400
64251 chr2 220044484 220044484 1 + A C OV 220044483 + 220044463 220044503 41 CCAGAGGAGCCACACTCTGACAGGTGAGTACAGGCCACCTC CCAGAGGAGCCACACTCTGACCGGTGAGTACAGGCCACCTC < 41bp 0.838870582982589 0.614784359320599 0.8917733 0.06857574 prediction 0.448172447323979 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044483 chr2:220044484 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_79012 0 0 4 DDX3X POSTAR2 ENCODE chr2:220044460-220044485
64251 chr4 1806690 1806690 1 + G A COAD 1806687 + 1806667 1806707 41 CGACCCCAAATGGGAGCTGTCTCGGGCCCGGTCAGTGGTGC CGACCCCAAATGGGAGCTGTCTCAGGCCCGGTCAGTGGTGC < 41bp 0.779519835091635 0.555435591701855 0.77263904 0.29477924 prediction 0.44816848677956 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1806687 chr4:1806690 nonsynonymous SNV 0.984 5 24 hm5C_associated_SNPs_79013 0 0 2 PPIG POSTAR2 ENCODE chr4:1806685-1806694
64251 chr11 118472007 118472007 1 + G C rs372691491 118472003 + 118471983 118472023 41 CCCAGGCTGGTCGCGAACTCCTGAGCTCAGGCAATCCGCCC CCCAGGCTGGTCGCGAACTCCTGACCTCAGGCAATCCGCCC < 41bp 0.870545424057378 0.646479093725931 0.4917971 0.32050303 prediction 0.448132660662895 Functional Loss - ARCN1 ENSG00000095139 UTR3 Human protein_coding chr11:118472003 chr11:118472007 . . 0 25 hm5C_associated_SNPs_79022 0 0 2 TIA1 POSTAR2 ENCODE chr11:118471968-118472021
64251 chr19 14266216 14266216 1 + G A UCEC 14266213 + 14266193 14266233 41 AAGACGAAGATGAAGACCCCCTGGAAGGCGTTGAAGGTGGT AAGACGAAGATGAAGACCCCCTGAAAGGCGTTGAAGGTGGT < 41bp 0.734969989037634 0.51090372614944 0.3247378 0.11248362 prediction 0.448132525776388 Functional Loss - ADGRL1 ENSG00000072071 CDS Human protein_coding chr19:14266213 chr19:14266216 synonymous SNV . 0 24 hm5C_associated_SNPs_79023 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:14266191-14266219
64251 chr8 126379036 126379036 1 + C T SKCM 126379034 + 126379014 126379054 41 CCTCAAATTGGCTGTAGCCACACGGATATAAGAAAGTCAGA CCTCAAATTGGCTGTAGCCACATGGATATAAGAAAGTCAGA < 41bp 0.724063626361373 0.45822136441805 0.4148357 0.7500817 prediction 0.448127252722746 Functional Loss - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126379034 chr8:126379036 nonsynonymous SNV 0.658 1 23 hm5C_associated_SNPs_79024 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:126379021-126379047
64251 chr3 184769678 184769678 1 + G A rs6810212 184769675 + 184769655 184769695 41 CCTTTGCAGCTGGCTCTCCTCACGGAACTCTCCCAGAATCG CCTTTGCAGCTGGCTCTCCTCACAGAACTCTCCCAGAATCG < 41bp 0.748802301801475 0.524741080699314 0.3968061 0.22149184 prediction 0.448122442204321 Functional Loss - VPS8 ENSG00000156931 CDS Human protein_coding chr3:184769675 chr3:184769678 synonymous SNV . 0 24 hm5C_associated_SNPs_79027 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:184769672-184769702
64251 chr16 2256583 2256583 1 + G A COAD 2256580 + 2256560 2256600 41 GACGGCGTCAACAAGAACATCGCGTCTGTGGGCTTCCACGA GACGGCGTCAACAAGAACATCGCATCTGTGGGCTTCCACGA < 41bp 0.724056891366355 0.487355181525042 0.1826806 0.27938247 prediction 0.448113782732709 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2256580 chr16:2256583 synonymous SNV . 0 24 hm5C_associated_SNPs_79032 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2256566-2256602
64251 chr16 845201 845201 1 + G A UCEC 845198 + 845178 845218 41 TGGGTGCTGTGTGTGTGGCCCTCGACTGGCTGGCCTTCGAT TGGGTGCTGTGTGTGTGGCCCTCAACTGGCTGGCCTTCGAT < 41bp 0.794591313297092 0.570534760668906 0.9218004 0.61219215 prediction 0.448113105256372 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845198 chr16:845201 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_79033 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:845172-845216
64251 chr2 15770167 15770167 1 + G T LUSC 15770165 + 15770145 15770185 41 GTACCATTTCTCAGGTTGAGCCGGATATAAAGGTACCAGTG GTACCATTTCTCAGGTTGAGCCTGATATAAAGGTACCAGTG < 41bp 0.724054521660323 0.38855798245032 0.5874869 0.19050312 prediction 0.448109043320645 Functional Loss - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770165 chr2:15770167 synonymous SNV . 0 23 hm5C_associated_SNPs_79035 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:15770128-15770210
64251 chr9 15460681 15460681 1 + G A rs545609058 15460678 + 15460658 15460698 41 GGATCACAGGCGTGAGCCACCGCGCCCGGCTGCTTTGGGGG GGATCACAGGCGTGAGCCACCGCACCCGGCTGCTTTGGGGG < 41bp 0.756168825023747 0.532122400828222 0.8846245 0.639773 prediction 0.448092848391051 Functional Loss - SNAPC3 ENSG00000164975 UTR3 Human protein_coding chr9:15460678 chr9:15460681 . . 0 24 hm5C_associated_SNPs_79039 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:15460662-15460698
64251 chr3 142443429 142443429 1 + G T UCS 142443427 + 142443407 142443447 41 GGCGGCCCTGTACCCGAGCACGGACCTCTCGGGCGCCTCCT GGCGGCCCTGTACCCGAGCACGTACCTCTCGGGCGCCTCCT < 41bp 0.724044468254567 0.37101824297571 0.8737681 0.36497742 prediction 0.448088936509134 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142443427 chr3:142443429 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_79041 0 0 6 RBM15 POSTAR2 GSE78030,GSM2064710 chr3:142443420-142443440
64251 chr11 67164800 67164800 1 + C T rs201788835 67164797 + 67164777 67164817 41 CCCAAGAGCCCCGGTCCCCACTCCGAGGAGGAAGATGAGGC CCCAAGAGCCCCGGTCCCCACTCTGAGGAGGAAGATGAGGC < 41bp 0.741168475623744 0.517124686289144 0.3663382 0.16214576 prediction 0.448087578669201 Functional Loss - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67164797 chr11:67164800 synonymous SNV . 0 24 hm5C_associated_SNPs_79044 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:67164800-67164801
64251 chr2 178299082 178299082 1 + A C BLCA 178299081 + 178299061 178299101 41 TCTTAGTGGCATGGGTTTACCAACATTTAAAGAATGGATCC TCTTAGTGGCATGGGTTTACCCACATTTAAAGAATGGATCC < 41bp 0.776346478289365 0.552310647233049 0.21353963 0.12751737 prediction 0.448071662112633 Functional Loss - AGPS ENSG00000018510 CDS Human protein_coding chr2:178299081 chr2:178299082 synonymous SNV . 0 22 hm5C_associated_SNPs_79046 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:178299069-178299092
64251 chr9 34251512 34251512 1 + T C rs569137877 34251511 + 34251491 34251531 41 TGCTTTGGAAGACCTCATGGCTCGGGCAGGAGCCAGCTGAG TGCTTTGGAAGACCTCATGGCCCGGGCAGGAGCCAGCTGAG < 41bp 0.724034303788159 0.480915281342441 0.23933765 0.16523543 prediction 0.448068607576318 Functional Loss - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34251511 chr9:34251512 synonymous SNV . 0 22 hm5C_associated_SNPs_79047 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:34251476-34251527
64251 chr8 67590042 67590042 1 + C T rs148867765 67590040 + 67590020 67590060 41 GTCGGGAGCACTTCGAAAACCACTGGAAAGGCCGGGCACGG GTCGGGAGCACTTCGAAAACCATTGGAAAGGCCGGGCACGG < 41bp 0.724033815353671 0.470201909628152 0.61663526 0.3866362 prediction 0.448067630707343 Functional Loss - C8orf44 ENSG00000213865 CDS Human protein_coding chr8:67590040 chr8:67590042 synonymous SNV . 0 23 hm5C_associated_SNPs_79048 0 0 1 U2AF1 POSTAR2 ENCODE chr8:67589960-67590068
64251 chr9 131469299 131469299 1 + T C UCEC 131469298 + 131469278 131469318 41 ACAGGACCGCAAGGCACTGGCTGAGGTCAGGCCCCAGCCCT ACAGGACCGCAAGGCACTGGCCGAGGTCAGGCCCCAGCCCT < 41bp 0.771256853812969 0.547224697368734 0.7893082 0.8994504 prediction 0.448064312888469 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131469298 chr9:131469299 synonymous SNV . 0 22 hm5C_associated_SNPs_79049 0 0 7 BUD13 POSTAR2 ENCODE chr9:131469265-131469301
64251 chr1 100329990 100329990 1 + G A COAD 100329987 + 100329967 100330007 41 ATTGCAGACTCTTGGACTATCTAGGTCATGCTACTCCCTTG ATTGCAGACTCTTGGACTATCTAAGTCATGCTACTCCCTTG < 41bp 0.732633299238806 0.508601499915265 0.3337234 0.08821246 prediction 0.448063598647081 Functional Loss - AGL ENSG00000162688 CDS Human protein_coding chr1:100329987 chr1:100329990 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_79050 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:100329983-100330009
64251 chr15 50716633 50716633 1 + G A rs2241769 50716630 + 50716610 50716650 41 CTGGCTTCCGTCCTGGTAGCCAAGGCTAATTCTCCCTCGAG CTGGCTTCCGTCCTGGTAGCCAAAGCTAATTCTCCCTCGAG < 41bp 0.745629030842283 0.521598171448786 0.873211 0.8582673 prediction 0.448061718786994 Functional Loss - USP8 ENSG00000138592 UTR5 Human protein_coding chr15:50716630 chr15:50716633 . . 0 24 hm5C_associated_SNPs_79051 0 0 3 DDX3X POSTAR2 ENCODE chr15:50716609-50716733
64251 chr19 19613182 19613182 1 + G T UCEC 19613179 + 19613159 19613199 41 GGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGTTC GGGGTTCGGCCACGACGCCCCGATGTGTCCTGCACACGTTC < 41bp 0.724022133838515 0.314774732761865 0.90066695 0.21301532 prediction 0.44804426767703 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19613179 chr19:19613182 nonsynonymous SNV 0.674 4 24 hm5C_associated_SNPs_79056 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19613172-19613201
64251 chr20 61458629 61458629 1 + G A LUAD 61458626 + 61458606 61458646 41 AGAGGGGCCCAGAAGGGTTCCGCGGCCCCAAGGGTGACCTC AGAGGGGCCCAGAAGGGTTCCGCAGCCCCAAGGGTGACCTC < 41bp 0.782681083603981 0.558669672590073 0.5852014 0.08594105 prediction 0.448022822027816 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61458626 chr20:61458629 nonsynonymous SNV 0.438 5 24 hm5C_associated_SNPs_79060 0 0 8 BUD13 POSTAR2 ENCODE chr20:61458596-61458642
64251 chr2 29404610 29404610 1 + G A LUSC 29404607 + 29404587 29404627 41 CTTCAGGTATCTGGCTTGGACTTGAGCTCCGAAGCGCCAAG CTTCAGGTATCTGGCTTGGACTTAAGCTCCGAAGCGCCAAG < 41bp 0.751613527260274 0.527609116401684 0.20662415 0.18035841 prediction 0.44800882171718 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29404607 chr2:29404610 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_79063 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:29404595-29404617
64251 chr19 50100518 50100518 1 + G C rs201508997 50100514 + 50100494 50100534 41 CCTGAGGACGAGGGGGACCCCAAGGCTGGCGCTGGGCCACC CCTGAGGACGAGGGGGACCCCAAGCCTGGCGCTGGGCCACC < 41bp 0.849650946658838 0.625646954233268 0.87596714 0.8196621 prediction 0.448007984851141 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50100514 chr19:50100518 nonsynonymous SNV 0.356 1 25 hm5C_associated_SNPs_79064 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50100443-50100526
64251 chr1 4772086 4772086 1 + C T HNSC 4772084 + 4772064 4772104 41 GCCCGGGGCCGGAGTTCTGGCTCCTGCCGCGGTCGCCGCCC GCCCGGGGCCGGAGTTCTGGCTTCTGCCGCGGTCGCCGCCC < 41bp 0.825183738178987 0.6011835595476 0.4017812 0.26785505 prediction 0.448000357262773 Functional Loss - AJAP1 ENSG00000196581 CDS Human protein_coding chr1:4772084 chr1:4772086 synonymous SNV . 0 23 hm5C_associated_SNPs_79066 0 0 3 FASTKD2 POSTAR2 ENCODE chr1:4772081-4772102
64251 chr10 86259689 86259689 1 + G A COAD 86259686 + 86259666 86259706 41 GGGCTCCTTCCAGGGGATCCCACGGACTGTTCCACCGCACC GGGCTCCTTCCAGGGGATCCCACAGACTGTTCCACCGCACC < 41bp 0.723998208603637 0.489875871209286 0.8814994 0.48242784 prediction 0.447996417207273 Functional Loss - CCSER2 ENSG00000107771 CDS Human protein_coding chr10:86259686 chr10:86259689 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79067 0 0 2 U2AF2 POSTAR2 ENCODE chr10:86259592-86259698
64251 chr20 49575810 49575810 1 + C T BLCA 49575808 + 49575788 49575828 41 AAGGCCTTTTCGGCCGCCGCCTCGCTGCGCCGCCTCAATTC AAGGCCTTTTCGGCCGCCGCCTTGCTGCGCCGCCTCAATTC < 41bp 0.723997261323629 0.469884201794256 0.15070817 0.07019219 prediction 0.447994522647258 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575808 chr20:49575810 nonsynonymous SNV 0.881 1 23 hm5C_associated_SNPs_79069 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:49575810-49575811
64251 chr22 37964251 37964251 1 + C T CESC 37964249 + 37964229 37964269 41 TCTTGTCCTTCCGCCTGGACCTCGACCTTGGGCCCTCACTC TCTTGTCCTTCCGCCTGGACCTTGACCTTGGGCCCTCACTC < 41bp 0.8364835769551 0.612488466712813 0.33040267 0.18333572 prediction 0.447990220484575 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964249 chr22:37964251 synonymous SNV . 0 23 hm5C_associated_SNPs_79070 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:37964183-37964292
64251 chr8 19703277 19703277 1 + G T UCEC 19703274 + 19703254 19703294 41 AGGAAGGTGGGAAAATTCATCTGGAATTACTACCCAATCAA AGGAAGGTGGGAAAATTCATCTGTAATTACTACCCAATCAA < 41bp 0.92233403853102 0.698339658265312 0.8761897 0.37052056 prediction 0.447988760531416 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19703274 chr8:19703277 stopgain 1.000 1 24 hm5C_associated_SNPs_79071 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:19703255-19703290
64251 chr4 84457546 84457546 1 + G C rs566716136 84457542 + 84457522 84457562 41 GCGGTGGCTTCAGCCCAGACCTGGGCAGCCAGCGGAGAAAG GCGGTGGCTTCAGCCCAGACCTGGCCAGCCAGCGGAGAAAG < 41bp 0.853765283402193 0.629772718777069 0.40027565 0.20705879 prediction 0.447985129250247 Functional Loss - GPAT3 ENSG00000138678 intronic Human protein_coding chr4:84457542 chr4:84457546 . . 0 25 hm5C_associated_SNPs_79072 0 0 1 DDX3X POSTAR2 ENCODE chr4:84457507-84457596
64251 chr12 122460019 122460019 1 + G A LUSC 122460016 + 122459996 122460036 41 CCATGTCGGGCAGGTCGGTTCGAGCCGAGACGAGGAGCCGG CCATGTCGGGCAGGTCGGTTCGAACCGAGACGAGGAGCCGG < 41bp 0.781533074533072 0.557542597550465 0.8957721 0.86543024 prediction 0.447980953965214 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122460016 chr12:122460019 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79074 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:122459997-122460051
64251 chr1 180794316 180794316 1 + G T COAD 180794313 + 180794293 180794333 41 TTTACTAGATTGCTGGATTCCTCGGGATATTGTGGTGCCTG TTTACTAGATTGCTGGATTCCTCTGGATATTGTGGTGCCTG < 41bp 0.723988816298621 0.348568162352957 0.0663169 0.08780837 prediction 0.447977632597243 Functional Loss - XPR1 ENSG00000143324 CDS Human protein_coding chr1:180794313 chr1:180794316 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_79076 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:180794308-180794333
64251 chr1 180794315 180794315 1 + C T COAD 180794313 + 180794293 180794333 41 TTTACTAGATTGCTGGATTCCTCGGGATATTGTGGTGCCTG TTTACTAGATTGCTGGATTCCTTGGGATATTGTGGTGCCTG < 41bp 0.723988816298621 0.434057252700071 0.0663169 0.11527833 prediction 0.447977632597243 Functional Loss - XPR1 ENSG00000143324 CDS Human protein_coding chr1:180794313 chr1:180794315 synonymous SNV . 0 23 hm5C_associated_SNPs_79077 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:180794308-180794333
64251 chr1 78546488 78546488 1 + G T HNSC 78546486 + 78546466 78546506 41 AGAAGTGAATGTGTATAAATCTGAGGATTCACTTGGTCTCA AGAAGTGAATGTGTATAAATCTTAGGATTCACTTGGTCTCA < 41bp 0.723988032163592 0.393888554731491 0.53752714 0.0584718 prediction 0.447976064327185 Functional Loss - GIPC2 ENSG00000137960 CDS Human protein_coding chr1:78546486 chr1:78546488 stopgain 0.374 1 23 hm5C_associated_SNPs_79078 0 0 1 PPIG POSTAR2 ENCODE chr1:78546418-78546530
64251 chr15 90814656 90814656 1 + G A UCEC 90814653 + 90814633 90814673 41 CCCTGCAGGCCACTCTGTATCAGGCTCTTTGCTTATGCCAG CCCTGCAGGCCACTCTGTATCAGACTCTTTGCTTATGCCAG < 41bp 0.810252490423873 0.58626501981659 0.9360672 0.90932065 prediction 0.447974941214567 Functional Loss - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814653 chr15:90814656 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_79079 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr15:90814591-90814659
64251 chr2 105472917 105472917 1 + C T STAD 105472915 + 105472895 105472935 41 CCCGCACTCGGACGAGGACACGCCGACGTCGGACGACCTGG CCCGCACTCGGACGAGGACACGTCGACGTCGGACGACCTGG < 41bp 0.735034695697034 0.511051254911028 0.20759112 0.28872085 prediction 0.447966881572012 Functional Loss - POU3F3 ENSG00000198914 CDS Human protein_coding chr2:105472915 chr2:105472917 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_79081 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:105472913-105472928
64251 chr9 133762404 133762404 1 + G A rs143273040 133762401 + 133762381 133762421 41 AGCACGCCTGCCATCTTCTCCCCGAGGCTGCCCCAGGCCGG AGCACGCCTGCCATCTTCTCCCCAAGGCTGCCCCAGGCCGG < 41bp 0.723981983704538 0.495842115062681 0.8285165 0.43351045 prediction 0.447963967409075 Functional Loss - ABL1 ENSG00000097007 UTR3 Human protein_coding chr9:133762401 chr9:133762404 . . 0 24 hm5C_associated_SNPs_79082 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:133762370-133762409
64251 chr7 7612689 7612689 1 + C T GBM 7612687 + 7612667 7612707 41 TCTGTCTCTTTGTTGGCTTCCACGAGACCAGAAACTTCTCC TCTGTCTCTTTGTTGGCTTCCATGAGACCAGAAACTTCTCC < 41bp 0.851066683815865 0.627087502828248 0.12148473 0.14815965 prediction 0.447958361975233 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7612687 chr7:7612689 stopgain 1.000 1 23 hm5C_associated_SNPs_79084 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:7612674-7612713
64251 chr16 4384872 4384872 1 + G A LGG 4384869 + 4384849 4384889 41 GTTCTTCCTGCCCCTCGGCTCCGGGGGGGCCCTGCACCTGC GTTCTTCCTGCCCCTCGGCTCCGAGGGGGCCCTGCACCTGC < 41bp 0.803498207745203 0.579522399598738 0.93811 0.36488384 prediction 0.447951616292931 Functional Loss - GLIS2 ENSG00000126603 CDS Human protein_coding chr16:4384869 chr16:4384872 nonsynonymous SNV 0.265 1 24 hm5C_associated_SNPs_79085 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:4384860-4384880
64251 chr15 42602622 42602622 1 + G A PRAD 42602619 + 42602599 42602639 41 GGTATTTTCTGGCTGAATGCCTCGGAAACACTGGTGGAGAT GGTATTTTCTGGCTGAATGCCTCAGAAACACTGGTGGAGAT < 41bp 0.760385675856771 0.536411221217072 0.09840453 0.10888621 prediction 0.447948909279398 Functional Loss - GANC ENSG00000214013 CDS Human protein_coding chr15:42602619 chr15:42602622 synonymous SNV . 0 24 hm5C_associated_SNPs_79086 0 0 1 BUD13 POSTAR2 ENCODE chr15:42602612-42602672
64251 chr9 131768820 131768820 1 + G A OV 131768817 + 131768797 131768837 41 GCCTCTCGCGCTACTTCCGCCGGGGAGCCCCCAGCTCCCCT GCCTCTCGCGCTACTTCCGCCGGAGAGCCCCCAGCTCCCCT < 41bp 0.767368305778325 0.543399217848245 0.8941579 0.8655295 prediction 0.447938175860159 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131768817 chr9:131768820 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_79089 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:131768794-131768843
64251 chr19 40485867 40485867 1 + A C BLCA 40485866 + 40485846 40485886 41 GAGATTGATGCCATCGCCACCAAGAGATTCGATGCTCAGAC GAGATTGATGCCATCGCCACCCAGAGATTCGATGCTCAGAC < 41bp 0.82035352923507 0.596384508522337 0.5810448 0.42588067 prediction 0.447938041425466 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40485866 chr19:40485867 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_79090 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40485800-40485878
64251 chr7 104753587 104753587 1 + T C LIHC 104753586 + 104753566 104753606 41 TACCTGTCACAGGTCCTCATCTCCAGCCCCAAGGACCAAAC TACCTGTCACAGGTCCTCATCCCCAGCCCCAAGGACCAAAC < 41bp 0.72396795516195 0.450859206325175 0.91807073 0.11421755 prediction 0.447935910323901 Functional Loss - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104753586 chr7:104753587 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_79093 0 0 7 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:104753582-104753640
64251 chr5 74655042 74655042 1 + G T UCEC 74655039 + 74655019 74655059 41 ATGATTGAGGTCAACATTAACAAGAATTTAGTGGGCTCTGC ATGATTGAGGTCAACATTAACAATAATTTAGTGGGCTCTGC < 41bp 0.723962489744831 0.384981255621397 0.6762495 0.28712848 prediction 0.447924979489662 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74655039 chr5:74655042 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_79097 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:74655037-74655082
64251 chr1 221055680 221055680 1 + C T BRCA 221055678 + 221055658 221055698 41 CTGGCGGCGATGCTGGGCCTCACGGACGCACAGGTAAGGCA CTGGCGGCGATGCTGGGCCTCATGGACGCACAGGTAAGGCA < 41bp 0.723962312519957 0.466411088489695 0.62288964 0.72089636 prediction 0.447924625039913 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221055678 chr1:221055680 nonsynonymous SNV 0.668 3 23 hm5C_associated_SNPs_79098 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:221055663-221055690
64251 chr1 221055681 221055681 1 + G A UCEC 221055678 + 221055658 221055698 41 CTGGCGGCGATGCTGGGCCTCACGGACGCACAGGTAAGGCA CTGGCGGCGATGCTGGGCCTCACAGACGCACAGGTAAGGCA < 41bp 0.723962312519957 0.475418525910737 0.62288964 0.62205446 prediction 0.447924625039913 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221055678 chr1:221055681 synonymous SNV . 0 24 hm5C_associated_SNPs_79099 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:221055663-221055690
64251 chr7 5104408 5104408 1 + G A BLCA 5104405 + 5104385 5104425 41 AGTGTGGGAAATTCTTTTCTCGGGTGTCATACCTCACTATA AGTGTGGGAAATTCTTTTCTCGGATGTCATACCTCACTATA < 41bp 0.72396049009704 0.480282908465813 0.94280165 0.92457175 prediction 0.447920980194081 Functional Loss - RBAK ENSG00000146587 CDS Human protein_coding chr7:5104405 chr7:5104408 nonsynonymous SNV 0.940 3 24 hm5C_associated_SNPs_79100 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr7:5104397-5104423
64251 chr3 45052761 45052761 1 + C T LIHC 45052759 + 45052739 45052779 41 GTGGGCAAGGTACTGCATGCCTCCTTGCAGAGTGTTGTGCA GTGGGCAAGGTACTGCATGCCTTCTTGCAGAGTGTTGTGCA < 41bp 0.723959787710263 0.430490024820329 0.0064133108 0.0043154955 prediction 0.447919575420527 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45052759 chr3:45052761 nonsynonymous SNV 0.457 2 23 hm5C_associated_SNPs_79101 0 0 1 BUD13 POSTAR2 ENCODE chr3:45052662-45052787
64251 chr15 50521172 50521172 1 + A C UCEC 50521168 + 50521148 50521188 41 AGGGGAAAATGTGGCCACCACTGAAGTTGCTGATACAGTTG AGGGGAAAATGTGGCCACCACTGACGTTGCTGATACAGTTG < 41bp 0.723948196977553 0.293979754495594 0.3898821 0.31590328 prediction 0.447896393955105 Functional Loss - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50521168 chr15:50521172 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_79104 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:50521153-50521179
64251 chr16 66919272 66919272 1 + G T COAD 66919270 + 66919250 66919290 41 TGGAGTAAAGAGTTGCAGCGCAGCATTCTGGAGAGGGGCTT TGGAGTAAAGAGTTGCAGCGCATCATTCTGGAGAGGGGCTT < 41bp 0.723947485337862 0.390261309291271 0.11908287 0.10454926 prediction 0.447894970675723 Functional Loss - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919270 chr16:66919272 nonsynonymous SNV 0.324 1 23 hm5C_associated_SNPs_79105 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:66919254-66919292
64251 chr10 6373217 6373217 1 + G A rs77984028 6373214 + 6373194 6373234 41 GGTTGAGAACTATTGTTCAACGCGAACTTCACATATGAAGC GGTTGAGAACTATTGTTCAACGCAAACTTCACATATGAAGC < 41bp 0.751288703973298 0.527341390842771 0.026091963 0.017753959 prediction 0.447894626261054 Functional Loss - LOC399715 ENSG00000215244 ncRNA_exonic Human lincRNA chr10:6373214 chr10:6373217 . . 0 24 hm5C_associated_SNPs_79106 0 0 7 CELF2 POSTAR2 GSE71264,GSM1831621 chr10:6373180-6373220
64251 chr8 42179460 42179460 1 + C T UCEC 42179458 + 42179438 42179478 41 CAGGAGACTAAGGGAAAAACCTCGAGGTAAGTGGGGTTCTG CAGGAGACTAAGGGAAAAACCTTGAGGTAAGTGGGGTTCTG < 41bp 0.856318396731205 0.632374252521362 0.8124504 0.33747935 prediction 0.447888288419686 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42179458 chr8:42179460 stopgain 0.008 1 23 hm5C_associated_SNPs_79107 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:42179460-42179496
64251 chr9 126777472 126777472 1 + G A COAD 126777469 + 126777449 126777489 41 CTCGGAGATGGTGATGCGCGCTCGGGACTTGGTTTATCACC CTCGGAGATGGTGATGCGCGCTCAGGACTTGGTTTATCACC < 41bp 0.791289550570193 0.567353109458501 0.09163284 0.061181545 prediction 0.447872882223385 Functional Loss - LHX2 ENSG00000106689 CDS Human protein_coding chr9:126777469 chr9:126777472 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79109 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr9:126777458-126777494
64251 chr19 13879704 13879704 1 + A C UCEC 13879703 + 13879683 13879723 41 CCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAG CCAACAAGGTGGGCACCTACCCGCTGGCCATTGTCGCCAAG < 41bp 0.828598672471163 0.604664411578365 0.3097421 0.123568654 prediction 0.447868521785594 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879703 chr19:13879704 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_79110 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:13879692-13879720
64251 chr6 76344455 76344455 1 + G A LIHC 76344452 + 76344432 76344472 41 GCAAAATACGTCATTATGTTCTGGAACTGTAGTTCATGGTA GCAAAATACGTCATTATGTTCTGAAACTGTAGTTCATGGTA < 41bp 0.73043405583632 0.506500713306461 0.05984491 0.031830817 prediction 0.447866685059717 Functional Loss - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76344452 chr6:76344455 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_79113 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:76344429-76344487
64251 chr8 123965254 123965254 1 + A C GBM 123965253 + 123965233 123965273 41 CAAAGGGGCATCGTCCACATCACCAGCGAATCCCTTGCCAA CAAAGGGGCATCGTCCACATCCCCAGCGAATCCCTTGCCAA < 41bp 0.805709482666701 0.581776838909937 0.22524858 0.20305687 prediction 0.447865287513529 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965253 chr8:123965254 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_79114 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:123965223-123965254
64251 chr7 152549306 152549306 1 + C T LUAD 152549304 + 152549284 152549324 41 TGGTGGATGCTAGGCTGAGGCTCAGCGAGGAGCTCAGCGGC TGGTGGATGCTAGGCTGAGGCTTAGCGAGGAGCTCAGCGGC < 41bp 0.723929775286759 0.442350000800239 0.8679401 0.88608336 prediction 0.447859550573518 Functional Loss - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152549304 chr7:152549306 synonymous SNV . 0 23 hm5C_associated_SNPs_79116 0 0 1 HNRNPUL1 POSTAR2 ENCODE chr7:152549212-152549384
64251 chr11 67378977 67378977 1 + C T UCEC 67378974 + 67378954 67378994 41 TGTGAGACGGTGCTGATGGACTTCGATGCGCTGGTGCAGGC TGTGAGACGGTGCTGATGGACTTTGATGCGCTGGTGCAGGC < 41bp 0.727525564707502 0.503605752081304 0.14508605 0.08285916 prediction 0.447839625252397 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378974 chr11:67378977 synonymous SNV . 0 24 hm5C_associated_SNPs_79123 2 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67378881-67378978
64251 chr11 59570198 59570198 1 + G A rs79797606 59570195 + 59570175 59570215 41 TGAAACGGTTCTGGCTCTGTCTCGATGCAGAAACACAATGA TGAAACGGTTCTGGCTCTGTCTCAATGCAGAAACACAATGA < 41bp 0.737363858320012 0.513455447773073 0.8877297 0.53527874 prediction 0.44781682109388 Functional Loss - STX3 ENSG00000166900 UTR3 Human protein_coding chr11:59570195 chr11:59570198 . . 0 24 hm5C_associated_SNPs_79130 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:59570177-59570205
64251 chr6 37138786 37138786 1 + G A UCEC 37138783 + 37138763 37138803 41 ATCAAACACGTGGAGAAGGACCGGATTTCCGACTGGGGAGA ATCAAACACGTGGAGAAGGACCGAATTTCCGACTGGGGAGA < 41bp 0.785225575830393 0.561321123238053 0.36870652 0.13753366 prediction 0.44780890518468 Functional Loss - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37138783 chr6:37138786 synonymous SNV . 0 24 hm5C_associated_SNPs_79132 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:37138771-37138787
64251 chr1 228675570 228675570 1 + G C rs61827301 228675566 + 228675546 228675586 41 GGAACCGCGCTGGAGGAAGGCGCTGCGCGGCAAGGTGCGCG GGAACCGCGCTGGAGGAAGGCGCTCCGCGGCAAGGTGCGCG < 41bp 0.723901339853437 0.455393597720448 0.57344705 0.53864115 prediction 0.447802679706875 Functional Loss - RNF187 ENSG00000168159 CDS Human protein_coding chr1:228675566 chr1:228675570 synonymous SNV . 0 25 hm5C_associated_SNPs_79135 0 0 2 RPS3 POSTAR2 ENCODE chr1:228675513-228675580
64251 chr1 33219734 33219734 1 + G C rs528325747 33219733 + 33219713 33219753 41 GGAAGGCCCCCAGCGGTCCCCGGGTCCGCAGCTTCTGGCGG GGAAGGCCCCCAGCGGTCCCCCGGTCCGCAGCTTCTGGCGG < 41bp 0.723900654709957 0.410986992603719 0.8859142 0.3603201 prediction 0.447801309419914 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33219733 chr1:33219734 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_79137 0 0 2 DDX3X POSTAR2 ENCODE chr1:33219706-33219747
64251 chr16 2816201 2816201 1 + G A UCEC 2816198 + 2816178 2816218 41 AAGCCGACGTAGGTCCAGATCTCGAACTTCACCAGTCAGCC AAGCCGACGTAGGTCCAGATCTCAAACTTCACCAGTCAGCC < 41bp 0.723898144290968 0.482085380199393 0.6171387 0.12756747 prediction 0.447796288581937 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816198 chr16:2816201 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_79139 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2816068-2816556
64251 chr1 27676925 27676925 1 + G A rs6702341 27676922 + 27676902 27676942 41 CCGGATAAGCAGAGCAAGCGCAAGACGGCGGTGAAGAAACG CCGGATAAGCAGAGCAAGCGCAAAACGGCGGTGAAGAAACG < 41bp 0.77470507488051 0.550812013736843 0.7331048 0.5882412 prediction 0.447786122287334 Functional Loss - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27676922 chr1:27676925 synonymous SNV . 0 24 hm5C_associated_SNPs_79141 0 0 1 PRPF8 POSTAR2 ENCODE chr1:27676867-27676947
64251 chr20 31021302 31021302 1 + G T LUAD 31021299 + 31021279 31021319 41 AAAACAGGAGTCAGAACAAGCAGGGGTTGCTAAGGATGCAA AAAACAGGAGTCAGAACAAGCAGTGGTTGCTAAGGATGCAA < 41bp 0.723881465386927 0.32101839645328 0.8945919 0.76389337 prediction 0.447762930773853 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021299 chr20:31021302 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_79145 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:31021292-31021339
64251 chr17 6023847 6023847 1 + G T BLCA 6023844 + 6023824 6023864 41 AGGAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGAC AGGAGGGCAGCTTCCGGCGGCGCTGCCGGCGCTCCCACGAC < 41bp 0.723877068319067 0.324809795346257 0.9220665 0.8769046 prediction 0.447754136638134 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023844 chr17:6023847 nonsynonymous SNV 0.499 4 24 hm5C_associated_SNPs_79149 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6023833-6023862
64251 chr17 4859418 4859418 1 + G A rs527864393 4859415 + 4859395 4859435 41 CTGAAGGTCAACCAGATCGGCTCGGTGACCGAATCGATCCA CTGAAGGTCAACCAGATCGGCTCAGTGACCGAATCGATCCA < 41bp 0.723860181361542 0.480646177932392 0.13703388 0.088754416 prediction 0.447720362723083 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4859415 chr17:4859418 synonymous SNV . 0 24 hm5C_associated_SNPs_79163 1 0 5 GRWD1 POSTAR2 ENCODE chr17:4859372-4859440
64251 chr3 38406773 38406773 1 + G T rs704943 38406771 + 38406751 38406791 41 ACCTCCGGCTACACCAGCAGCTGCAGGTAACTGTGGCTACG ACCTCCGGCTACACCAGCAGCTTCAGGTAACTGTGGCTACG < 41bp 0.723856219881356 0.377000591781597 0.40736616 0.054222256 prediction 0.447712439762711 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38406771 chr3:38406773 synonymous SNV . 0 23 hm5C_associated_SNPs_79165 0 0 4 EFTUD2 POSTAR2 ENCODE chr3:38406770-38406849
64251 chr17 41367905 41367905 1 + G A rs554375910 41367902 + 41367882 41367922 41 GTCCGTCATTGTGCAGCCTGCAGGCCTCAACTCCTCCACAG GTCCGTCATTGTGCAGCCTGCAGACCTCAACTCCTCCACAG < 41bp 0.808085559986134 0.584232544796891 0.43119946 0.19557041 prediction 0.447706030378486 Functional Loss - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41367902 chr17:41367905 nonsynonymous SNV 0.897 3 24 hm5C_associated_SNPs_79167 0 0 1 GRWD1 POSTAR2 ENCODE chr17:41367862-41367965
64251 chrX 67937976 67937976 1 + G A rs55962426 67937973 + 67937953 67937993 41 GCAACGAGTAGAGCTGTGGTCTCGGGCCATGTACCCAGACC GCAACGAGTAGAGCTGTGGTCTCAGGCCATGTACCCAGACC < 41bp 0.801041538865155 0.577192536576022 0.2647075 0.20284483 prediction 0.447698004578265 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67937973 chrX:67937976 nonsynonymous SNV 0.991 0 24 hm5C_associated_SNPs_79170 0 0 3 FMR1 POSTAR2 ENCODE chrX:67937955-67938002
64251 chr2 27320391 27320391 1 + G T KIRC 27320389 + 27320369 27320409 41 AGGGCCGGAACGCATCGGAGCAGGTGAAGATGCTGCAGCGG AGGGCCGGAACGCATCGGAGCATGTGAAGATGCTGCAGCGG < 41bp 0.723848090845486 0.354762899719465 0.93505853 0.3221815 prediction 0.447696181690973 Functional Loss - KHK ENSG00000138030 CDS Human protein_coding chr2:27320389 chr2:27320391 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_79172 0 0 3 BUD13 POSTAR2 ENCODE chr2:27320345-27320395
64251 chr3 131082318 131082318 1 + G A SKCM 131082315 + 131082295 131082335 41 AGCAGTTACTGGATACCCTCCAGGACTTGGGAGTGGTGGAA AGCAGTTACTGGATACCCTCCAGAACTTGGGAGTGGTGGAA < 41bp 0.73499881719587 0.511159272903725 0.65463024 0.26496446 prediction 0.447679088584291 Functional Loss - NUDT16P1 ENSG00000246082 ncRNA_exonic Human transcribed_unitary_pseudogene chr3:131082315 chr3:131082318 . . 0 24 hm5C_associated_SNPs_79177 0 0 1 DDX3X POSTAR2 ENCODE chr3:131082232-131082328
64251 chr6 88138454 88138454 1 + C T rs34588434 88138452 + 88138432 88138472 41 TTCAGCCATTCTTGGGTGCTCACGAACTATACTTTCCTGAG TTCAGCCATTCTTGGGTGCTCATGAACTATACTTTCCTGAG < 41bp 0.854036153016703 0.630199478093354 0.36662564 0.26032245 prediction 0.447673349846699 Functional Loss - CFAP206 ENSG00000213204;ENSG00000272514 CDS Human other chr6:88138452 chr6:88138454 synonymous SNV . 0 23 hm5C_associated_SNPs_79179 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:88138434-88138461
64251 chr16 3452365 3452365 1 + G A CESC 3452362 + 3452342 3452382 41 GCAGCAAGGAGATTGTGACCCTCGTGGAAGATTTTCACAGA GCAGCAAGGAGATTGTGACCCTCATGGAAGATTTTCACAGA < 41bp 0.768105429585824 0.54426914153115 0.119945675 0.14254785 prediction 0.447672576109347 Functional Loss - ZNF174 ENSG00000103343 CDS Human protein_coding chr16:3452362 chr16:3452365 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_79180 0 0 1 ZNF622 POSTAR2 ENCODE chr16:3452325-3452414
64251 chr10 124810615 124810615 1 + A C UCEC 124810611 + 124810591 124810631 41 GGCCACCCAGCTGGAAGCTGCAAGATTACTAACATACAATG GGCCACCCAGCTGGAAGCTGCAAGCTTACTAACATACAATG < 41bp 0.723834498182459 0.316626392931627 0.22048947 0.133892 prediction 0.447668996364919 Functional Loss - ACADSB ENSG00000196177 CDS Human protein_coding chr10:124810611 chr10:124810615 nonsynonymous SNV 0.891 3 25 hm5C_associated_SNPs_79183 0 0 3 GRWD1 POSTAR2 ENCODE chr10:124810564-124810615
64251 chr1 173454641 173454641 1 + C T COAD 173454639 + 173454619 173454659 41 AAAGGGCATGCCTGTGACAGCTCGTGTGGTAGGTCATACAA AAAGGGCATGCCTGTGACAGCTTGTGTGGTAGGTCATACAA < 41bp 0.837978019020094 0.614146747867031 0.18133408 0.09707224 prediction 0.447662542306125 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173454639 chr1:173454641 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_79186 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:173454567-173454644
64251 chr17 19285336 19285336 1 + C T UCEC 19285334 + 19285314 19285354 41 AAGCCTGTTGGAACGCTGGACTCGAATGGCCCGGCCCGCAG AAGCCTGTTGGAACGCTGGACTTGAATGGCCCGGCCCGCAG < 41bp 0.84907683320989 0.625245995864723 0.9072409 0.32385784 prediction 0.447661674690335 Functional Loss - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19285334 chr17:19285336 stopgain 0.998 0 23 hm5C_associated_SNPs_79187 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:19285335-19285336
64251 chr19 57743955 57743955 1 + C T SKCM 57743953 + 57743933 57743973 41 ATAACTATTTCCATGATGCACGCCGGGTGTACCTGATTCTG ATAACTATTTCCATGATGCACGTCGGGTGTACCTGATTCTG < 41bp 0.723830442908222 0.447369766560764 0.018993378 0.018432528 prediction 0.447660885816445 Functional Loss - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743953 chr19:57743955 synonymous SNV . 0 23 hm5C_associated_SNPs_79190 0 0 1 ZNF622 POSTAR2 ENCODE chr19:57743948-57744043
64251 chr5 56111445 56111445 1 + G A rs192120973 56111442 + 56111422 56111462 41 CGCGCCTCGTCGTCGGGATTCCCGGGCGCCAGGGCTACGAG CGCGCCTCGTCGTCGGGATTCCCAGGCGCCAGGGCTACGAG < 41bp 0.791378808868499 0.567548699232166 0.92571485 0.89577395 prediction 0.447660219272667 Functional Loss - MAP3K1 ENSG00000095015 CDS Human protein_coding chr5:56111442 chr5:56111445 synonymous SNV . 0 24 hm5C_associated_SNPs_79191 0 0 1 RPS3 POSTAR2 ENCODE chr5:56111430-56111494
64251 chr22 45581825 45581825 1 + G A rs180854610 45581822 + 45581802 45581842 41 GGTCAGTGCCCAAGGGCTCCCGCGTGTGTGTTCTGATCTTC GGTCAGTGCCCAAGGGCTCCCGCATGTGTGTTCTGATCTTC < 41bp 0.763777667476792 0.539952303890784 0.35578698 0.26610458 prediction 0.447650727172014 Functional Loss - LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45581822 chr22:45581825 . . 0 24 hm5C_associated_SNPs_79193 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr22:45581793-45581846
64251 chr9 90322224 90322224 1 + C T UCEC 90322222 + 90322202 90322242 41 AATGGCCAGGAGGCCTATGCCTCGAGCTGCAACAGCGGCAC AATGGCCAGGAGGCCTATGCCTTGAGCTGCAACAGCGGCAC < 41bp 0.8547587166216 0.630934426587251 0.43591627 0.18049106 prediction 0.447648580068699 Functional Loss - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90322222 chr9:90322224 nonsynonymous SNV 0.934 1 23 hm5C_associated_SNPs_79194 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:90322211-90322246
64251 chr17 38243103 38243103 1 + C T rs2230702 38243100 + 38243080 38243120 41 GCCAAAAAACTGCCCATGTTCTCCGAGGTGAGTGGCAGAAG GCCAAAAAACTGCCCATGTTCTCTGAGGTGAGTGGCAGAAG < 41bp 0.752858083683164 0.529037569158197 0.14695966 0.14964989 prediction 0.447641029049934 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38243100 chr17:38243103 synonymous SNV . 0 24 hm5C_associated_SNPs_79199 0 0 3 AGGF1 POSTAR2 ENCODE chr17:38243091-38243190
64251 chr7 7613768 7613768 1 + C T SKCM 7613765 + 7613745 7613785 41 AGAAGATATGGATCAGAAATCTCCAGGCAACAAAGGATCAT AGAAGATATGGATCAGAAATCTCTAGGCAACAAAGGATCAT < 41bp 0.73632221522704 0.512503897082101 0.66946495 0.21711272 prediction 0.447636636289879 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7613765 chr7:7613768 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_79203 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:7613742-7613775
64251 chr5 145838696 145838696 1 + C T LUAD 145838694 + 145838674 145838714 41 AGCCCAAGCCCAGGCCCAGGCTCAGGCTCAGGCACAAGCTC AGCCCAAGCCCAGGCCCAGGCTTAGGCTCAGGCACAAGCTC < 41bp 0.81194673502929 0.588139414207183 0.18460551 0.19273764 prediction 0.447614641644213 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838694 chr5:145838696 stopgain 0.115 1 23 hm5C_associated_SNPs_79207 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr3 124458996 124458996 1 + G T BLCA 124458994 + 124458974 124459014 41 TCGGGGGTGCCTCCTTATTGCGGAAATGAGCTCCACCGGCT TCGGGGGTGCCTCCTTATTGCGTAAATGAGCTCCACCGGCT < 41bp 0.897793910238762 0.673998804875792 0.90172136 0.14838576 prediction 0.447590210725941 Functional Loss - UMPS ENSG00000114491 CDS Human protein_coding chr3:124458994 chr3:124458996 stopgain 0.989 1 23 hm5C_associated_SNPs_79212 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:124458972-124459007
64251 chr10 3189824 3189824 1 - C A SKCM 3189827 - 3189807 3189847 41 GGGCACCTGTACGCATCCATCAGGGCAGGCCGGACCCTCAC GGGCACCTGTACGCATCCATCAGTGCAGGCCGGACCCTCAC < 41bp 0.932936395889246 0.709143466325332 0.95224977 0.6710335 prediction 0.447585859127828 Functional Loss - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189827 chr10:3189824 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_79213 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:3189824-3189860
64251 chr2 220072755 220072755 1 + G A UCEC 220072752 + 220072732 220072772 41 GGGGAGGGGCACCCAACCAGCCGGGCAGGGTAATGGCAGCC GGGGAGGGGCACCCAACCAGCCGAGCAGGGTAATGGCAGCC < 41bp 0.72378650058132 0.48057683920386 0.7540941 0.7339834 prediction 0.447573001162641 Functional Loss - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072752 chr2:220072755 synonymous SNV . 0 24 hm5C_associated_SNPs_79215 0 0 5 BUD13 POSTAR2 ENCODE chr2:220072693-220072756
64251 chr13 88328456 88328456 1 + C T DLBC 88328454 + 88328434 88328474 41 GTGAGACCCCCTTCCGCTTACACGGAAGGGACTTGGACGAG GTGAGACCCCCTTCCGCTTACATGGAAGGGACTTGGACGAG < 41bp 0.834415954061655 0.610629595514253 0.26281106 0.39755225 prediction 0.447572717094805 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328454 chr13:88328456 synonymous SNV . 0 23 hm5C_associated_SNPs_79216 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88328420-88328460
64251 chr19 36237720 36237720 1 + C T SKCM 36237718 + 36237698 36237738 41 GGTGCCCTTGGGGACTACCTCTCCTTCACCATACCCCTGGG GGTGCCCTTGGGGACTACCTCTTCTTCACCATACCCCTGGG < 41bp 0.833450959482755 0.609669307984781 0.278318 0.0666081 prediction 0.447563302995946 Functional Loss - PSENEN ENSG00000205155 CDS Human protein_coding chr19:36237718 chr19:36237720 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_79219 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:36237682-36237724
64251 chr9 136307848 136307848 1 + G A rs36221451 136307845 + 136307825 136307865 41 CGTGGCCAGAGGCCTGCGTGCTCGAACCCTGCCCTCCCTAG CGTGGCCAGAGGCCTGCGTGCTCAAACCCTGCCCTCCCTAG < 41bp 0.763674286257353 0.539898739014011 0.18051824 0.16323137 prediction 0.447551094486684 Functional Loss - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136307845 chr9:136307848 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_79225 2 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:136307846-136307872
64251 chr9 33342786 33342786 1 + C T SKCM 33342783 + 33342763 33342803 41 CTTTGATTTGTGGGAGGAAACTCCGTTGTGGCCTTCATAGG CTTTGATTTGTGGGAGGAAACTCTGTTGTGGCCTTCATAGG < 41bp 0.761110241839455 0.537336914777423 0.32699895 0.23520821 prediction 0.447546654124064 Functional Loss - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33342783 chr9:33342786 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_79227 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:33342782-33342819
64251 chr9 37762114 37762114 1 + G A STAD 37762111 + 37762091 37762131 41 ACAGGCAGTACGGCATGGTGCTCGGTGAGTGCGTGAATTGC ACAGGCAGTACGGCATGGTGCTCAGTGAGTGCGTGAATTGC < 41bp 0.789053782198566 0.565281627576779 0.1660409 0.10104886 prediction 0.447544309243572 Functional Loss - TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37762111 chr9:37762114 nonsynonymous SNV 0.712 2 24 hm5C_associated_SNPs_79229 0 0 2 BUD13 POSTAR2 ENCODE chr9:37762018-37762152
64251 chr10 75552519 75552519 1 + G A rs200013804 75552516 + 75552496 75552536 41 TCTGAATGCCCAGGATGGGGCTGGGGGCGAGGAAGAGAAGG TCTGAATGCCCAGGATGGGGCTGAGGGCGAGGAAGAGAAGG < 41bp 0.723766937174105 0.485324323052878 0.83245945 0.7158805 prediction 0.44753387434821 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75552516 chr10:75552519 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_79232 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75552499-75552527
64251 chr8 6616057 6616057 1 + A C rs534300382 6616056 + 6616036 6616076 41 AAGCCCTTGTGAGTGGGCTTCACCAGCTACTGCAGAGGCAT AAGCCCTTGTGAGTGGGCTTCCCCAGCTACTGCAGAGGCAT < 41bp 0.723758805913434 0.465941119556077 0.24684256 0.21389249 prediction 0.447517611826868 Functional Loss - AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6616056 chr8:6616057 . . 0 22 hm5C_associated_SNPs_79238 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:6616040-6616060
64251 chr11 118938621 118938621 1 + C T rs141677018 118938619 + 118938599 118938639 41 TGAGCAATGATGGGGCCGCTCCCGGGGCCACACCTGCTTCT TGAGCAATGATGGGGCCGCTCCTGGGGCCACACCTGCTTCT < 41bp 0.747040612675049 0.523289315550528 0.6195648 0.48659566 prediction 0.44750259424904 Functional Loss - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118938619 chr11:118938621 synonymous SNV . 0 23 hm5C_associated_SNPs_79244 0 0 1 DDX3X POSTAR2 ENCODE chr11:118938554-118938641
64251 chr7 76026960 76026960 1 + G A LUSC 76026957 + 76026937 76026977 41 CGTTGTCCAGCAGGATGTGTCCGGTGCCATAGCCGAAGAAG CGTTGTCCAGCAGGATGTGTCCGATGCCATAGCCGAAGAAG < 41bp 0.723748955693976 0.480028477777194 0.67295694 0.1741536 prediction 0.447497911387952 Functional Loss - SSC4D ENSG00000146700 CDS Human protein_coding chr7:76026957 chr7:76026960 nonsynonymous SNV 0.404 3 24 hm5C_associated_SNPs_79245 0 0 1 DDX3X POSTAR2 ENCODE chr7:76026931-76027028
64251 chr1 113236720 113236720 1 + G T OV 113236718 + 113236698 113236738 41 TTTTGTCCTCGGAGACACACCAGGAGGACCCCATCACATAT TTTTGTCCTCGGAGACACACCATGAGGACCCCATCACATAT < 41bp 0.907337172315682 0.683588222727096 0.8206043 0.06727281 prediction 0.447497899177172 Functional Loss - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113236718 chr1:113236720 nonsynonymous SNV 0.882 1 23 hm5C_associated_SNPs_79246 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:113236711-113236741
64251 chr1 156770179 156770179 1 + A C COAD 156770175 + 156770155 156770195 41 CCTTGCCACAGGCCAAGGAGCGGGAGCTGGAACTGAAGAAC CCTTGCCACAGGCCAAGGAGCGGGCGCTGGAACTGAAGAAC < 41bp 0.926877348052816 0.703134374285681 0.9115884 0.84750736 prediction 0.447485947534271 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156770175 chr1:156770179 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_79248 0 0 14 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:156770160-156770180
64251 chr2 176958177 176958177 1 + G A COAD 176958174 + 176958154 176958194 41 CGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTC CGGCCAACGAGGTGCCAGCGCGAACCAAGGAGGTATCCTTC < 41bp 0.723736799744116 0.468607804384333 0.7953402 0.56552595 prediction 0.447473599488232 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176958174 chr2:176958177 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_79252 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:176958160-176958200
64251 chr6 43109925 43109925 1 + G A GBM 43109922 + 43109902 43109942 41 CCCGACAGGATGCACATCTTCCAGAATGGCTCCCTGGTGAT CCCGACAGGATGCACATCTTCCAAAATGGCTCCCTGGTGAT < 41bp 0.723732926185535 0.479110952598066 0.30053392 0.24507385 prediction 0.447465852371069 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43109922 chr6:43109925 synonymous SNV . 0 24 hm5C_associated_SNPs_79258 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr6:43109923-43109974
64251 chrX 152612875 152612875 1 + G A LUSC 152612872 + 152612852 152612892 41 TTCGCCTGCAAGGCGTGCAGCAGGGATTTCCTGGATCGCCA TTCGCCTGCAAGGCGTGCAGCAGAGATTTCCTGGATCGCCA < 41bp 0.804787060054966 0.581061233207456 0.90512896 0.5279574 prediction 0.44745165369502 Functional Loss - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152612872 chrX:152612875 synonymous SNV . 0 24 hm5C_associated_SNPs_79260 0 0 3 RBM15 POSTAR2 ENCODE chrX:152612857-152612971
64251 chr6 155143508 155143508 1 + G A rs372358045 155143505 + 155143485 155143525 41 AGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTCCCTCCT AGGAGACAGTGGTCACAACCCAGACAGAGGTTTTCCCTCCT < 41bp 0.723718470071923 0.478458267662373 0.54106736 0.033627927 prediction 0.447436940143846 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155143505 chr6:155143508 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_79265 0 0 1 IGF2BP2 POSTAR2 ENCODE chr6:155143478-155143532
64251 chr1 15953255 15953255 1 + A T SKCM 15953251 + 15953231 15953271 41 GGGACGTTGTGATTTTACGACAGAAGGAGAATGCAGACCCT GGGACGTTGTGATTTTACGACAGATGGAGAATGCAGACCCT < 41bp 0.723718079365074 0.393310566222506 0.29041195 0.3205409 prediction 0.447436158730147 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15953251 chr1:15953255 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_79267 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:15953228-15953264
64251 chr19 50905747 50905747 1 + G A KIRC 50905744 + 50905724 50905764 41 ACGGACATCGTCGGCTGCAACTGGCTGGAGCTCCCAGCTGG ACGGACATCGTCGGCTGCAACTGACTGGAGCTCCCAGCTGG < 41bp 0.808090479725705 0.584374844706614 0.33795768 0.1897636 prediction 0.447431270038181 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905744 chr19:50905747 stopgain 0.967 0 24 hm5C_associated_SNPs_79269 0 0 8 FMR1 POSTAR2 ENCODE chr19:50905712-50905765
64251 chr8 22472422 22472422 1 + C T rs201108674 22472420 + 22472400 22472440 41 GGTCTCCTTCCCTGGATGGCCTCGACCCCCAGGCTGACCCG GGTCTCCTTCCCTGGATGGCCTTGACCCCCAGGCTGACCCG < 41bp 0.856938441807719 0.633223374404659 0.8798126 0.7020971 prediction 0.447430134806121 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22472420 chr8:22472422 synonymous SNV . 0 23 hm5C_associated_SNPs_79270 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:22472401-22472423
64251 chr19 50154813 50154813 1 + G A rs75405162 50154810 + 50154790 50154830 41 CCCCTGCTGCCGCCCGGCGACTCGGAGATCGAGGAAGGGGA CCCCTGCTGCCGCCCGGCGACTCAGAGATCGAGGAAGGGGA < 41bp 0.778904957173335 0.555191593180814 0.5007235 0.35343632 prediction 0.447426727985041 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154810 chr19:50154813 synonymous SNV . 0 24 hm5C_associated_SNPs_79272 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50154790-50154814
64251 chr16 67228323 67228323 1 + G A CESC 67228320 + 67228300 67228340 41 GGAGATACCCTCTTGGCCATCCGGGCCCCATCAGGCACCAG GGAGATACCCTCTTGGCCATCCGAGCCCCATCAGGCACCAG < 41bp 0.791635599838019 0.567924407195065 0.22991553 0.3452231 prediction 0.447422385285909 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67228320 chr16:67228323 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_79273 0 0 10 BUD13 POSTAR2 ENCODE chr16:67228297-67228346
64251 chr9 131250230 131250230 1 + G T BLCA 131250227 + 131250207 131250247 41 AGGAGAAGATGCGGGAAGACCGGGATAGCCTGGTGGAGAGA AGGAGAAGATGCGGGAAGACCGGTATAGCCTGGTGGAGAGA < 41bp 0.915044159333487 0.691347388675061 0.89998424 0.40348846 prediction 0.447393541316853 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131250227 chr9:131250230 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79279 0 0 10 BUD13 POSTAR2 ENCODE chr9:131250205-131250256
64251 chr2 101604651 101604651 1 + G T LUAD 101604648 + 101604628 101604668 41 GCAGTGACTCAGCCCCAGCTCGGGGCGGGCCCCCAACTTCC GCAGTGACTCAGCCCCAGCTCGGTGCGGGCCCCCAACTTCC < 41bp 0.933919196077214 0.710223861959104 0.93252486 0.5116783 prediction 0.447390668236219 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101604648 chr2:101604651 synonymous SNV . 0 24 hm5C_associated_SNPs_79281 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101604623-101604709
64251 chr20 3781635 3781635 1 + G A BLCA 3781632 + 3781612 3781652 41 CTGCAGGATGGATTTGTCTTCAAGATGCCATGGAAGCCCAC CTGCAGGATGGATTTGTCTTCAAAATGCCATGGAAGCCCAC < 41bp 0.760387374076587 0.536699236235811 0.26730612 0.19605461 prediction 0.447376275681553 Functional Loss - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781632 chr20:3781635 synonymous SNV . 0 24 hm5C_associated_SNPs_79287 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:3781614-3781652
64251 chr2 220402018 220402018 1 + T C COAD 220402017 + 220401997 220402037 41 GGGCCAGCATCCTCACGTTGCTGGAGATCCTCGACTACATC GGGCCAGCATCCTCACGTTGCCGGAGATCCTCGACTACATC < 41bp 0.723687493988362 0.496049274010287 0.5119958 0.86534643 prediction 0.447374987976724 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220402017 chr2:220402018 nonsynonymous SNV 0.879 4 22 hm5C_associated_SNPs_79289 0 0 3 DDX24 POSTAR2 ENCODE chr2:220402006-220402036
64251 chr8 22477160 22477160 1 + T C UCEC 22477159 + 22477139 22477179 41 TGTTTCAAACAGGCTGACAGCTGGGTGGAGAAGGAGGAGCC TGTTTCAAACAGGCTGACAGCCGGGTGGAGAAGGAGGAGCC < 41bp 0.75321300358243 0.529530561449233 0.44129002 0.8984004 prediction 0.447364884266394 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22477159 chr8:22477160 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_79290 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:22477148-22477172
64251 chr1 185191035 185191035 1 + G A SKCM 185191032 + 185191012 185191052 41 AAAACACAGTGACTAAAAAGCAGGAAGGTACTTCATTGAAG AAAACACAGTGACTAAAAAGCAGAAAGGTACTTCATTGAAG < 41bp 0.731897764898793 0.50821660928976 0.32188815 0.12907067 prediction 0.447362311218065 Functional Loss - SWT1 ENSG00000116668 CDS Human protein_coding chr1:185191032 chr1:185191035 nonsynonymous SNV 0.370 2 24 hm5C_associated_SNPs_79292 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:185191032-185191059
64251 chr1 150923546 150923546 1 + C T UCEC 150923543 + 150923523 150923563 41 GAATTTCTGGTTGGCTGTGACTGCAAGGATGGGTGTCGGGA GAATTTCTGGTTGGCTGTGACTGTAAGGATGGGTGTCGGGA < 41bp 0.749329881297535 0.525660741787975 0.33864725 0.07033357 prediction 0.447338279019119 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923543 chr1:150923546 synonymous SNV . 0 24 hm5C_associated_SNPs_79295 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:150923509-150923549
64251 chr6 43581903 43581903 1 + T C rs9333554 43581902 + 43581882 43581922 41 TTTGTGAAGGGGTGTCGAAGCTAGAAGAATCCTCTAAAGCA TTTGTGAAGGGGTGTCGAAGCCAGAAGAATCCTCTAAAGCA < 41bp 0.749124630423447 0.52546088168878 0.2503609 0.42507783 prediction 0.447327497469334 Functional Loss - POLH ENSG00000170734 CDS Human protein_coding chr6:43581902 chr6:43581903 nonsynonymous SNV 0.135 0 22 hm5C_associated_SNPs_79296 0 0 3 RBM15 POSTAR2 ENCODE chr6:43581880-43581924
64251 chr19 30936347 30936347 1 + G A HNSC 30936344 + 30936324 30936364 41 AACCTGCAGGGTCCTGGGAACATGAAGGAGAAGCCCACCGA AACCTGCAGGGTCCTGGGAACATAAAGGAGAAGCCCACCGA < 41bp 0.723651185178223 0.484614814783809 0.5410929 0.3182658 prediction 0.447302370356445 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936344 chr19:30936347 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_79301 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30936323-30936351
64251 chrX 47060944 47060944 1 + C T SKCM 47060942 + 47060922 47060962 41 TTTGAGAGCGGGGACTTTGTCTCCTTTTCAGAAGTACAGGG TTTGAGAGCGGGGACTTTGTCTTCTTTTCAGAAGTACAGGG < 41bp 0.723647586982315 0.421227430284653 0.11088964 0.17440951 prediction 0.44729517396463 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47060942 chrX:47060944 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_79304 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:47060916-47060950
64251 chrX 70516801 70516801 1 + G A SKCM 70516798 + 70516778 70516818 41 TTGAGATGGAGAAGCAGCAGCAGGACCAAGTGGACCGCAAC TTGAGATGGAGAAGCAGCAGCAGAACCAAGTGGACCGCAAC < 41bp 0.767556320159987 0.54391508014199 0.800057 0.53259385 prediction 0.447282480035994 Functional Loss - NONO ENSG00000147140 CDS Human protein_coding chrX:70516798 chrX:70516801 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_79309 0 0 21 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:70516780-70516840
64251 chr20 61440966 61440966 1 + T C STAD 61440965 + 61440945 61440985 41 ATTGAGGACATTCTTCAGAACTGGACGGACAACTATGACCT ATTGAGGACATTCTTCAGAACCGGACGGACAACTATGACCT < 41bp 0.794082619965483 0.570443154057359 0.38441777 0.6021418 prediction 0.447278931816248 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61440965 chr20:61440966 nonsynonymous SNV 0.952 4 22 hm5C_associated_SNPs_79312 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:61440945-61440981
64251 chr7 21516840 21516840 1 + C T UCEC 21516837 + 21516817 21516857 41 AAGTGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAG AAGTGCATTTGCAGCAAGGCCAGTAGACTTCTGATCAAGAG < 41bp 0.724870841094323 0.501231664316275 0.22262448 0.16092417 prediction 0.447278353556096 Functional Loss - SP4 ENSG00000105866 CDS Human protein_coding chr7:21516837 chr7:21516840 stopgain 0.993 1 24 hm5C_associated_SNPs_79313 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:21516814-21516840
64251 chr6 107811679 107811679 1 + G C rs561639000 107811678 + 107811658 107811698 41 GGCGCCTGCCCTCCCCCTCGCGGCTCGGTCCGGCCCCGCCA GGCGCCTGCCCTCCCCCTCGCCGCTCGGTCCGGCCCCGCCA < 41bp 0.723633897409815 0.464318303459773 0.7143665 0.094717234 prediction 0.447267794819629 Functional Loss - SOBP ENSG00000112320 UTR5 Human protein_coding chr6:107811678 chr6:107811679 . . 0 22 hm5C_associated_SNPs_79317 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:107811652-107811697
64251 chr16 677608 677608 1 + T C KIRP 677607 + 677587 677627 41 CAGAACTGCTCGCGGAGTAACTGCAAGATCTCCTAGCGGGG CAGAACTGCTCGCGGAGTAACCGCAAGATCTCCTAGCGGGG < 41bp 0.723632846073261 0.479825599295348 0.5712555 0.34963763 prediction 0.447265692146522 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:677607 chr16:677608 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_79318 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:677598-677631
64251 chr2 198324736 198324736 1 + G A COAD 198324733 + 198324713 198324753 41 TTTGCCTAAGGAGATATGTGCACGAACTTTCTTCAAAATCA TTTGCCTAAGGAGATATGTGCACAAACTTTCTTCAAAATCA < 41bp 0.751573839335054 0.527949044736542 0.037446916 0.0062007606 prediction 0.447249589197024 Functional Loss - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198324733 chr2:198324736 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_79327 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:198324728-198324746
64251 chr9 131105564 131105564 1 + C T STAD 131105562 + 131105542 131105582 41 TCTTCATCAAGACCATCAGGCGCGATATCTTGTGAGTACCT TCTTCATCAAGACCATCAGGCGTGATATCTTGTGAGTACCT < 41bp 0.723614845491631 0.448981124739029 0.40405267 0.3562749 prediction 0.447229690983261 Functional Loss - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131105562 chr9:131105564 synonymous SNV . 0 23 hm5C_associated_SNPs_79333 0 0 1 PRPF8 POSTAR2 ENCODE chr9:131105561-131105602
64251 chr4 158041734 158041734 1 + G A UCEC 158041731 + 158041711 158041751 41 GCAGTCAGCAGAGGACCTTGCCCGAGTACCTGCCAACTCCA GCAGTCAGCAGAGGACCTTGCCCAAGTACCTGCCAACTCCA < 41bp 0.758824185789463 0.53520937184655 0.5406951 0.21889263 prediction 0.447229627885827 Functional Loss - GLRB ENSG00000109738 CDS Human protein_coding chr4:158041731 chr4:158041734 nonsynonymous SNV 0.418 2 24 hm5C_associated_SNPs_79334 0 0 2 DDX3X POSTAR2 GSE59096,GSM1427358 chr4:158041720-158041740
64251 chr12 54423569 54423569 1 + G A STAD 54423566 + 54423546 54423586 41 CGGCGCATCGAGATCGCCAACGCGCTTTGCCTGACCGAGCG CGGCGCATCGAGATCGCCAACGCACTTTGCCTGACCGAGCG < 41bp 0.723609139742694 0.486345777458153 0.46498665 0.377971 prediction 0.447218279485387 Functional Loss - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54423566 chr12:54423569 synonymous SNV . 0 24 hm5C_associated_SNPs_79339 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54423560-54423580
64251 chr12 54423568 54423568 1 + C T UCEC 54423566 + 54423546 54423586 41 CGGCGCATCGAGATCGCCAACGCGCTTTGCCTGACCGAGCG CGGCGCATCGAGATCGCCAACGTGCTTTGCCTGACCGAGCG < 41bp 0.723609139742694 0.459388846735306 0.46498665 0.85553014 prediction 0.447218279485387 Functional Loss - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54423566 chr12:54423568 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_79340 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54423560-54423580
64251 chr7 128482927 128482927 1 + G A UCEC 128482924 + 128482904 128482944 41 GACATTGACTTCGACATCATCAAGAATGACAACGACACCTT GACATTGACTTCGACATCATCAAAAATGACAACGACACCTT < 41bp 0.723607330467908 0.491577589164147 0.3386812 0.0619182 prediction 0.447214660935816 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128482924 chr7:128482927 synonymous SNV . 0 24 hm5C_associated_SNPs_79343 0 0 1 FXR1 POSTAR2 ENCODE chr7:128482924-128482983
64251 chr20 2638932 2638932 1 + G A rs151092895 2638929 + 2638909 2638949 41 AAAAGTTCCATAAAGCATCCCAGGAAGATTAGAATGCAAAT AAAAGTTCCATAAAGCATCCCAGAAAGATTAGAATGCAAAT < 41bp 0.759444242177134 0.535839625283775 0.15093324 0.09492031 prediction 0.447209233786719 Functional Loss - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2638929 chr20:2638932 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_79347 0 0 5 DDX55 POSTAR2 ENCODE chr20:2638931-2638994
64251 chr19 50028774 50028774 1 + C T UVM 50028772 + 50028752 50028792 41 GTCATCGGTGTCTTGCTACTCACGGCAGCGGCTGTAGGAGG GTCATCGGTGTCTTGCTACTCATGGCAGCGGCTGTAGGAGG < 41bp 0.78236436054899 0.558762244719397 0.3548639 0.3389709 prediction 0.447204231659186 Functional Loss - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50028772 chr19:50028774 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_79348 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50028748-50028807
64251 chr19 48830826 48830826 1 + T C UCEC 48830825 + 48830805 48830845 41 TCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACAC TCCCTGAATCTCTGGTACGACCGCACGTGGAACAACGACAC < 41bp 0.826388128612453 0.602795137973204 0.2130993 0.115207136 prediction 0.447185981278499 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48830825 chr19:48830826 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_79354 0 0 8 BUD13 POSTAR2 ENCODE chr19:48830744-48830844
64251 chr19 54657010 54657010 1 + C T rs367687183 54657008 + 54656988 54657028 41 CAGTTGCCCACTGGCTCACCCGCGGCCCCTCCCCAGCCCTG CAGTTGCCCACTGGCTCACCCGTGGCCCCTCCCCAGCCCTG < 41bp 0.723591537809643 0.489010398526774 0.6949214 0.60446405 prediction 0.447183075619286 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54657008 chr19:54657010 synonymous SNV . 0 23 hm5C_associated_SNPs_79355 0 0 3 DDX59 POSTAR2 ENCODE chr19:54656942-54657087
64251 chr19 54657011 54657011 1 + G A rs114617329 54657008 + 54656988 54657028 41 CAGTTGCCCACTGGCTCACCCGCGGCCCCTCCCCAGCCCTG CAGTTGCCCACTGGCTCACCCGCAGCCCCTCCCCAGCCCTG < 41bp 0.723591537809643 0.468847789890556 0.6949214 0.10084587 prediction 0.447183075619286 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54657008 chr19:54657011 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_79356 0 0 3 DDX59 POSTAR2 ENCODE chr19:54656942-54657087
64251 chr19 50434180 50434180 1 + G A COAD 50434177 + 50434157 50434197 41 CAGCTAGTGGGCTGGGATGGCTCGTAGACTATGGGAAACTC CAGCTAGTGGGCTGGGATGGCTCATAGACTATGGGAAACTC < 41bp 0.72358921046014 0.494845917269461 0.3657856 0.26476255 prediction 0.44717842092028 Functional Loss - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50434177 chr19:50434180 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_79358 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:50434160-50434180
64251 chr17 55123352 55123352 1 + C T UCEC 55123350 + 55123330 55123370 41 CAGCTCGTCAACGGCATCATCACGCCCGCCACCATCCCCAG CAGCTCGTCAACGGCATCATCATGCCCGCCACCATCCCCAG < 41bp 0.727521674857757 0.503940651973686 0.41557467 0.22046083 prediction 0.447162045768141 Functional Loss - RNF126P1 ENSG00000261192 ncRNA_exonic Human transcribed_processed_pseudogene chr17:55123350 chr17:55123352 . . 0 23 hm5C_associated_SNPs_79361 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:55123343-55123391
64251 chrX 106884202 106884202 1 + C T LUSC 106884200 + 106884180 106884220 41 GCAGGTGCAGATCATATTATCACCATGGACCTACATGCTTC GCAGGTGCAGATCATATTATCATCATGGACCTACATGCTTC < 41bp 0.849138088151566 0.625563037883851 0.13336268 0.07579127 prediction 0.447150100535429 Functional Loss - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106884200 chrX:106884202 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_79364 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:106884163-106884202
64251 chr11 721696 721696 1 + A C rs370435617 721695 + 721675 721715 41 CAAGAAGGCGCCAGCAGGTGCAGGGGACAGGGACGGGGCCG CAAGAAGGCGCCAGCAGGTGCCGGGGACAGGGACGGGGCCG < 41bp 0.784512416976909 0.560946387618608 0.90620506 0.9033687 prediction 0.447132058716603 Functional Loss - EPS8L2 ENSG00000269915 ncRNA_intronic Human antisense chr11:721695 chr11:721696 . . 0 22 hm5C_associated_SNPs_79366 0 0 3 EFTUD2 POSTAR2 ENCODE chr11:721691-721717
64251 chr6 36189968 36189968 1 + G T SARC 36189966 + 36189946 36189986 41 GGTCTGACGCCCCCCAAACGCAGCCGTGGGAAGCCAGCCCT GGTCTGACGCCCCCCAAACGCATCCGTGGGAAGCCAGCCCT < 41bp 0.723562822684383 0.36589583002188 0.8359771 0.33955008 prediction 0.447125645368765 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36189966 chr6:36189968 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_79368 0 0 1 BUD13 POSTAR2 ENCODE chr6:36189898-36189981
64251 chr1 110884619 110884619 1 + T C STAD 110884618 + 110884598 110884638 41 TGCCATTCTTTTGGCTGTGCCTGGAAGTTCTGACAGCCGGT TGCCATTCTTTTGGCTGTGCCCGGAAGTTCTGACAGCCGGT < 41bp 0.72355650528448 0.486558935285648 0.29293782 0.60419786 prediction 0.44711301056896 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884618 chr1:110884619 synonymous SNV . 0 22 hm5C_associated_SNPs_79371 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:110884523-110884635
64251 chr17 1933486 1933486 1 + G T SARC 1933483 + 1933463 1933503 41 GATGGCGGCGCTGGTCGTATCCGGGGCAGCGGAGCAGGGCG GATGGCGGCGCTGGTCGTATCCGTGGCAGCGGAGCAGGGCG < 41bp 0.927890670844255 0.704338813752487 0.9181192 0.863608 prediction 0.447103714183537 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1933483 chr17:1933486 nonsynonymous SNV 0.042 0 24 hm5C_associated_SNPs_79377 0 0 1 NCBP2 POSTAR2 ENCODE chr17:1933440-1933537
64251 chr14 103803041 103803041 1 + T C STAD 103803040 + 103803020 103803060 41 CCAAATATTTTGGTTGTGAGCTGGGAGCACAGACCCAGTTT CCAAATATTTTGGTTGTGAGCCGGGAGCACAGACCCAGTTT < 41bp 0.744419705716875 0.520869137419361 0.14983931 0.47393924 prediction 0.447101136595029 Functional Loss - EIF5 ENSG00000100664 CDS Human protein_coding chr14:103803040 chr14:103803041 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_79378 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:103803013-103803045
64251 chr3 56603413 56603413 1 + C T rs143181508 56603411 + 56603391 56603431 41 GGCCTCAGGAAGCTTTTACTCACGGTGGAAGGCAAAGGGGG GGCCTCAGGAAGCTTTTACTCATGGTGGAAGGCAAAGGGGG < 41bp 0.733968856828542 0.510424552405736 0.85043454 0.8864106 prediction 0.447088608845611 Functional Loss - CCDC66 ENSG00000180376 UTR3 Human protein_coding chr3:56603411 chr3:56603413 . . 0 23 hm5C_associated_SNPs_79379 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221667 chr3:56603400-56603420
64251 chr7 89982286 89982286 1 + C T OV 89982284 + 89982264 89982304 41 ACAACTTAAAGACAGGTATCCTCGGAAACGGTTTGTGGCTG ACAACTTAAAGACAGGTATCCTTGGAAACGGTTTGTGGCTG < 41bp 0.723537119751051 0.438102532528071 0.71448153 0.39705527 prediction 0.447074239502102 Functional Loss - GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:89982284 chr7:89982286 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_79382 0 0 2 GRWD1 POSTAR2 ENCODE chr7:89982137-89982325
64251 chr7 89982285 89982285 1 + T C UCEC 89982284 + 89982264 89982304 41 ACAACTTAAAGACAGGTATCCTCGGAAACGGTTTGTGGCTG ACAACTTAAAGACAGGTATCCCCGGAAACGGTTTGTGGCTG < 41bp 0.723537119751051 0.474951745977684 0.71448153 0.70385283 prediction 0.447074239502102 Functional Loss - GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:89982284 chr7:89982285 synonymous SNV . 0 22 hm5C_associated_SNPs_79383 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:89982284-89982285
64251 chr19 47761828 47761828 1 + G A COAD 47761825 + 47761805 47761845 41 CCCGGTCTCAGGCAGCCACACTCGATTTGAAATCAAAGGAG CCCGGTCTCAGGCAGCCACACTCAATTTGAAATCAAAGGAG < 41bp 0.79397317379339 0.570438800302046 0.4335906 0.10008252 prediction 0.447068746982688 Functional Loss - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47761825 chr19:47761828 nonsynonymous SNV 0.845 4 24 hm5C_associated_SNPs_79384 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:47761780-47761829
64251 chr5 137522831 137522831 1 + T C BLCA 137522830 + 137522810 137522850 41 ACAACATGGTGCTAGTGAAACTGGACCTTCGGAAGAAGGCA ACAACATGGTGCTAGTGAAACCGGACCTTCGGAAGAAGGCA < 41bp 0.739608555220223 0.516086339399385 0.25680438 0.27581024 prediction 0.447044431641676 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137522830 chr5:137522831 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_79386 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:137522783-137522883
64251 chr12 8248234 8248234 1 + G A STAD 8248231 + 8248211 8248251 41 TTGGATTCTCCTGCTCCTGTCACGACACCAGCACCAACTCC TTGGATTCTCCTGCTCCTGTCACAACACCAGCACCAACTCC < 41bp 0.791483719183914 0.567963251382042 0.10458338 0.108958095 prediction 0.447040935603745 Functional Loss - NECAP1 ENSG00000089818 CDS Human protein_coding chr12:8248231 chr12:8248234 synonymous SNV . 0 24 hm5C_associated_SNPs_79387 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:8248208-8248234
64251 chr10 103920492 103920492 1 + G T ESCA 103920490 + 103920470 103920510 41 CTCTATCTCTGCCTGCCAAGCAGGCTCCTCAGGGTAGTAGG CTCTATCTCTGCCTGCCAAGCATGCTCCTCAGGGTAGTAGG < 41bp 0.723516796410005 0.350920310156644 0.89486027 0.25867873 prediction 0.447033592820009 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920490 chr10:103920492 nonsynonymous SNV 0.747 1 23 hm5C_associated_SNPs_79389 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:103920454-103920498
64251 chr16 88873021 88873021 1 + C T ACC 88873019 + 88872999 88873039 41 GCGCTGCCCCAGCCACCCGCCACGGAGAAGCTCACCACTGC GCGCTGCCCCAGCCACCCGCCATGGAGAAGCTCACCACTGC < 41bp 0.808247358931625 0.584731969446548 0.63720185 0.64637166 prediction 0.447030778970153 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873019 chr16:88873021 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_79390 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88872993-88873041
64251 chr1 207269885 207269885 1 + G A UCEC 207269882 + 207269862 207269902 41 CTCAGGGGACTGTGACCCTCCTGGGAATCCAGTTCATGGCT CTCAGGGGACTGTGACCCTCCTGAGAATCCAGTTCATGGCT < 41bp 0.756235093113673 0.532719826749415 0.3437863 0.16886345 prediction 0.447030532728515 Functional Loss - C4BPB ENSG00000123843 CDS Human protein_coding chr1:207269882 chr1:207269885 nonsynonymous SNV 0.950 0 24 hm5C_associated_SNPs_79391 0 0 7 SF3A3 POSTAR2 ENCODE chr1:207269811-207269896
64251 chr16 2259370 2259370 1 + G T SKCM 2259368 + 2259348 2259388 41 GGCCAGGTCGGGGGCTCAGTCTGGGAGGTAATAAAAGCAGA GGCCAGGTCGGGGGCTCAGTCTTGGAGGTAATAAAAGCAGA < 41bp 0.811290747443773 0.587777986551906 0.91318667 0.42239392 prediction 0.447025521783735 Functional Loss - BRICD5 ENSG00000182685 CDS Human protein_coding chr16:2259368 chr16:2259370 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_79392 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2259333-2259376
64251 chr2 112686861 112686861 1 + G T LUAD 112686859 + 112686839 112686879 41 CCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCC CCAGCCTGGAAGACCACATACATGAAACGTAGCCATTCCCC < 41bp 0.90543477220579 0.681925868524348 0.7746358 0.3726396 prediction 0.447017807362885 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112686859 chr2:112686861 stopgain 0.002 0 23 hm5C_associated_SNPs_79395 0 0 2 GRWD1 POSTAR2 ENCODE chr2:112686831-112686892
64251 chr19 19212626 19212626 1 + G T SARC 19212624 + 19212604 19212644 41 AGTGCTCAGCTCCCTGCTGTCTGGGGCCCTGGCTGGTGCCC AGTGCTCAGCTCCCTGCTGTCTTGGGCCCTGGCTGGTGCCC < 41bp 0.917233311490047 0.693724805667461 0.8842782 0.29160124 prediction 0.447017011645173 Functional Loss - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19212624 chr19:19212626 nonsynonymous SNV 0.970 5 23 hm5C_associated_SNPs_79396 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:19212625-19212626
64251 chr1 119683216 119683216 1 - C T LGG 119683219 - 119683199 119683239 41 GTGAGCGCTGGAGCTTCATCCGGGCACTTCATAAGGGATCC GTGAGCGCTGGAGCTTCATCCGGACACTTCATAAGGGATCC < 41bp 0.769842764786356 0.546336282186713 0.9091753 0.7472547 prediction 0.447012965199286 Functional Loss - WARS2 ENSG00000116874 CDS Human protein_coding chr1:119683219 chr1:119683216 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79397 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:119683204-119683226
64251 chr5 236650 236650 1 + G A UCEC 236647 + 236627 236667 41 GCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGT GCCAACCGCCTCGGGGCAAACTCACTCTTGGACCTGGTTGT < 41bp 0.79337791239773 0.569879169010886 0.4202269 0.24928436 prediction 0.446997486773689 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:236647 chr5:236650 synonymous SNV . 0 24 hm5C_associated_SNPs_79403 3 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:236640-236660
64251 chr19 14581019 14581019 1 + G A LUAD 14581016 + 14580996 14581036 41 CCAGCACATTCTGTGGGACCCCGGAGTTCCTGGCCCCTGAG CCAGCACATTCTGTGGGACCCCGAAGTTCCTGGCCCCTGAG < 41bp 0.763687289663605 0.540188697528046 0.8988528 0.81414086 prediction 0.446997184271118 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14581016 chr19:14581019 nonsynonymous SNV 0.942 1 24 hm5C_associated_SNPs_79404 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14581003-14581109
64251 chr7 43635615 43635615 1 + G A HNSC 43635612 + 43635592 43635632 41 ATTGTCGGATGGAAATAATTCATGAGATTGCTGTACTTGAA ATTGTCGGATGGAAATAATTCATAAGATTGCTGTACTTGAA < 41bp 0.72576180805262 0.50226514308339 0.25692743 0.15086818 prediction 0.446993329938459 Functional Loss - STK17A ENSG00000164543 CDS Human protein_coding chr7:43635612 chr7:43635615 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79407 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:43635612-43635634
64251 chr8 1949293 1949293 1 + G T rs143973546 1949290 + 1949270 1949310 41 CTGGAAACCCCGGAGTAAGGCTCGACCTTGGCCAGACCTGC CTGGAAACCCCGGAGTAAGGCTCTACCTTGGCCAGACCTGC < 41bp 0.723491524945084 0.436333298030019 0.29664913 0.23764804 prediction 0.446983049890169 Functional Loss - KBTBD11 ENSG00000176595 UTR5 Human protein_coding chr8:1949290 chr8:1949293 . . 0 24 hm5C_associated_SNPs_79410 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:1949293-1949294
64251 chr6 71567716 71567716 1 + A T OV 71567712 + 71567692 71567732 41 ATCGATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATAG ATCGATGGGCGTGCCTGTGCCTGCTGCTCCTGGCCTTATAG < 41bp 0.898129229076381 0.67463773287111 0.5964181 0.23386434 prediction 0.446982992410543 Functional Loss - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71567712 chr6:71567716 synonymous SNV . 0 25 hm5C_associated_SNPs_79411 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:71567695-71567718
64251 chr9 15461794 15461794 1 + C T rs373666590 15461792 + 15461772 15461812 41 ATTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATGTCTA ATTGGCTTGGAGATGACAAGCATGAGTTTCTGGTATGTCTA < 41bp 0.723490023059656 0.478437319234142 0.3256483 0.28643882 prediction 0.446980046119313 Functional Loss - SNAPC3 ENSG00000164975 UTR3 Human protein_coding chr9:15461792 chr9:15461794 . . 0 23 hm5C_associated_SNPs_79412 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:15461768-15461795
64251 chr16 31090554 31090554 1 + T C UCEC 31090553 + 31090533 31090573 41 GTGGTCAGACCTACGATGACCTGGGGAGCCTGGAGCGTCAC GTGGTCAGACCTACGATGACCCGGGGAGCCTGGAGCGTCAC < 41bp 0.740472642289814 0.516984720657312 0.90045285 0.91411734 prediction 0.446975843265003 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31090553 chr16:31090554 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_79413 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:31090544-31090569
64251 chr1 151065737 151065737 1 + C T LUSC 151065734 + 151065714 151065754 41 TGCATTGGGCCACAGAGCGCCACCATCGAGATGTCGTAGAG TGCATTGGGCCACAGAGCGCCACTATCGAGATGTCGTAGAG < 41bp 0.723478892176506 0.489224758297336 0.0118424 0.003990501 prediction 0.446957784353011 Functional Loss - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151065734 chr1:151065737 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_79422 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:151065714-151065740
64251 chrX 47100265 47100265 1 + C T UCEC 47100263 + 47100243 47100283 41 GGCAACACGTGCTTCATGAACTCGGCCCTGCAGGTTGGGCC GGCAACACGTGCTTCATGAACTTGGCCCTGCAGGTTGGGCC < 41bp 0.723477096529007 0.446287738128036 0.21437013 0.25588316 prediction 0.446954193058015 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47100263 chrX:47100265 nonsynonymous SNV 0.925 4 23 hm5C_associated_SNPs_79424 0 0 2 GRWD1 POSTAR2 ENCODE chrX:47100241-47100281
64251 chr1 29647207 29647207 1 + G A rs528853967 29647204 + 29647184 29647224 41 GGTTTCCCTGCAGAGCTACACACGGAGTGCGGCCTTCATCG GGTTTCCCTGCAGAGCTACACACAGAGTGCGGCCTTCATCG < 41bp 0.795260408367081 0.571783429912181 0.57883483 0.13132691 prediction 0.446953956909798 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29647204 chr1:29647207 nonsynonymous SNV 0.900 2 24 hm5C_associated_SNPs_79425 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29647194-29647232
64251 chr17 34842521 34842521 1 + A C rs4796224 34842517 + 34842497 34842537 41 GTGAGAGGCGCGCGGCGGCGCAGTAAACAGTCTCCTTCCAC GTGAGAGGCGCGCGGCGGCGCAGTCAACAGTCTCCTTCCAC < 41bp 0.723470870867534 0.357029959538782 0.8665597 0.311279 prediction 0.446941741735069 Functional Loss - ZNHIT3 ENSG00000108278 UTR5 Human other chr17:34842517 chr17:34842521 . . 0 25 hm5C_associated_SNPs_79430 0 0 2 YBX3 POSTAR2 ENCODE chr17:34842518-34842630
64251 chr9 91943789 91943789 1 + A T LUAD 91943785 + 91943765 91943805 41 AAGAGAAGTAGTAAAACCAGCTGCAGTGTTATCAAAGGTGA AAGAGAAGTAGTAAAACCAGCTGCTGTGTTATCAAAGGTGA < 41bp 0.723468456299201 0.393230263537425 0.2096138 0.15061241 prediction 0.446936912598402 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91943785 chr9:91943789 synonymous SNV . 0 25 hm5C_associated_SNPs_79431 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:91943779-91943801
64251 chr19 21203488 21203488 1 + G A rs73012943 21203485 + 21203465 21203505 41 CCCTCGCTGTGGCCTGAGCTCCAGGTCTCGTCTTCAGCGCT CCCTCGCTGTGGCCTGAGCTCCAAGTCTCGTCTTCAGCGCT < 41bp 0.753381521565673 0.529920868020907 0.89045227 0.50319177 prediction 0.446921307089531 Functional Loss - ZNF430 ENSG00000118620 UTR5 Human protein_coding chr19:21203485 chr19:21203488 . . 0 24 hm5C_associated_SNPs_79439 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:21203449-21203498
64251 chrX 135067912 135067912 1 + C T LUAD 135067910 + 135067890 135067930 41 TTCATCCTGCTGCTCACCCTCACCATTCTCACAATCTGGCT TTCATCCTGCTGCTCACCCTCATCATTCTCACAATCTGGCT < 41bp 0.832486066811338 0.609025958997294 0.06358671 0.079520494 prediction 0.446920215628089 Functional Loss - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135067910 chrX:135067912 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_79440 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:135067901-135067927
64251 chr6 28200604 28200604 1 + G A UCEC 28200601 + 28200581 28200621 41 TCGACATCAAAGAATTCATACTGGAGAAAGACCTTATGAAT TCGACATCAAAGAATTCATACTGAAGAAAGACCTTATGAAT < 41bp 0.756621548744304 0.533163197919739 0.08954391 0.030783504 prediction 0.446916701649131 Functional Loss - ZSCAN9 ENSG00000137185 CDS Human protein_coding chr6:28200601 chr6:28200604 nonsynonymous SNV 0.427 2 24 hm5C_associated_SNPs_79441 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:28200589-28200615
64251 chr19 40480456 40480456 1 + G A rs34344223 40480453 + 40480433 40480473 41 CAGAAGCCAGATGTGATGTACGCGGACATCGGAGGCATGGA CAGAAGCCAGATGTGATGTACGCAGACATCGGAGGCATGGA < 41bp 0.787417061076799 0.563959127951517 0.35428342 0.24665281 prediction 0.446915866250564 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480453 chr19:40480456 synonymous SNV . 0 24 hm5C_associated_SNPs_79443 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:40480443-40480464
64251 chr17 72436372 72436372 1 + G A SKCM 72436369 + 72436349 72436389 41 CCCGGAAGAACCACGGGCCCCGGGGCTGGGTGATCTTCACT CCCGGAAGAACCACGGGCCCCGGAGCTGGGTGATCTTCACT < 41bp 0.793226062541814 0.569773822787071 0.890799 0.77490926 prediction 0.446904479509486 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436369 chr17:72436372 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_79445 0 0 5 DDX3X POSTAR2 ENCODE chr17:72436322-72436382
64251 chr9 131392631 131392631 1 + G A UCEC 131392628 + 131392608 131392648 41 TGGTGGAAGAGTCGGGGACCCTCGAATCCCAGCTTGAAGCT TGGTGGAAGAGTCGGGGACCCTCAAATCCCAGCTTGAAGCT < 41bp 0.729555829944389 0.506107761379424 0.91444695 0.89647686 prediction 0.44689613712993 Functional Loss - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131392628 chr9:131392631 nonsynonymous SNV 0.755 4 24 hm5C_associated_SNPs_79446 0 0 1 SND1 POSTAR2 ENCODE chr9:131392614-131392655
64251 chr7 44240615 44240615 1 + G C rs569954309 44240614 + 44240594 44240634 41 GAGGAAGCCGGCGGTGGCCCCGTCAGCAGCCGGCTGCTGAG GAGGAAGCCGGCGGTGGCCCCCTCAGCAGCCGGCTGCTGAG < 41bp 0.85540511560949 0.631957697501882 0.077199966 0.020054847 prediction 0.446894836215215 Functional Loss - YKT6 ENSG00000106636 UTR5 Human protein_coding chr7:44240614 chr7:44240615 . . 0 22 hm5C_associated_SNPs_79447 0 0 4 DDX3X POSTAR2 ENCODE chr7:44240590-44240693
64251 chr6 13977390 13977390 1 + G T LUSC 13977387 + 13977367 13977407 41 CTGAAGACACTGCGGAGTCTCAGGCCTCTGATGAGCTGGAG CTGAAGACACTGCGGAGTCTCAGTCCTCTGATGAGCTGGAG < 41bp 0.723439272761226 0.331246107573413 0.88810134 0.20728657 prediction 0.446878545522452 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977387 chr6:13977390 nonsynonymous SNV 0.778 1 24 hm5C_associated_SNPs_79448 0 0 2 YBX3 POSTAR2 ENCODE chr6:13977353-13977410
64251 chr15 91185787 91185787 1 + G A rs371097657 91185784 + 91185764 91185804 41 GGCGGGCCCGGAGTGGGAGGCTCGGCCTGGGGCGGCGGCAC GGCGGGCCCGGAGTGGGAGGCTCAGCCTGGGGCGGCGGCAC < 41bp 0.783489258713715 0.560059141365705 0.9044343 0.90934795 prediction 0.446860234696022 Functional Loss - CRTC3-AS1 ENSG00000259736 ncRNA_intronic Human antisense chr15:91185784 chr15:91185787 . . 0 24 hm5C_associated_SNPs_79451 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:91185778-91185805
64251 chr12 68043673 68043673 1 + C T GBM 68043671 + 68043651 68043691 41 GTGGGGACTGGCCCGCCCTCCCCCATCGCCCTGCCGCCTCT GTGGGGACTGGCCCGCCCTCCCTCATCGCCCTGCCGCCTCT < 41bp 0.838683207291278 0.615256244399771 0.32346612 0.1772838 prediction 0.446853925783014 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68043671 chr12:68043673 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_79452 0 0 1 XRN2 POSTAR2 ENCODE chr12:68043640-68043698
64251 chr19 13884043 13884043 1 + G A rs555046014 13884040 + 13884020 13884060 41 ACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACTCAAATG ACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACTCAAATG < 41bp 0.76559403082606 0.542172422922872 0.7385248 0.43697232 prediction 0.446843215806374 Functional Loss - MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884040 chr19:13884043 . . 0 24 hm5C_associated_SNPs_79455 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr19:13884040-13884060
64251 chr4 177243342 177243342 1 + T C LIHC 177243341 + 177243321 177243361 41 AAAAAATGTAGAAGATTTCACTGGACCTAGAGAAAGAAGTG AAAAAATGTAGAAGATTTCACCGGACCTAGAGAAAGAAGTG < 41bp 0.743072341990257 0.51966044994806 0.5003677 0.5668267 prediction 0.446823784084393 Functional Loss - SPCS3 ENSG00000129128 CDS Human protein_coding chr4:177243341 chr4:177243342 synonymous SNV . 0 22 hm5C_associated_SNPs_79463 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:177243323-177243353
64251 chr19 17628609 17628609 1 + C T UCEC 17628607 + 17628587 17628627 41 ACTACCTGTCCTGAATGCAGCACGAACTGTCATCTTTGTGG ACTACCTGTCCTGAATGCAGCATGAACTGTCATCTTTGTGG < 41bp 0.723402847353438 0.44865872998595 0.041218698 0.041342944 prediction 0.446805694706876 Functional Loss - PGLS ENSG00000130313 CDS Human protein_coding chr19:17628607 chr19:17628609 stopgain 0.937 1 23 hm5C_associated_SNPs_79471 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17628599-17628632
64251 chr8 42174363 42174363 1 + G T LUAD 42174360 + 42174340 42174380 41 AGGAGGACCAGGAGCTGCTGCAGGAAGCGGGCCTGGCGTTG AGGAGGACCAGGAGCTGCTGCAGTAAGCGGGCCTGGCGTTG < 41bp 0.926141102486028 0.702745347394862 0.83659434 0.48063815 prediction 0.446791510182331 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42174360 chr8:42174363 stopgain 0.937 1 24 hm5C_associated_SNPs_79475 0 0 2 BUD13 POSTAR2 ENCODE chr8:42174308-42174406
64251 chr1 151236495 151236495 1 + C T COAD 151236493 + 151236473 151236513 41 TCACCTTCTGCACGGGCATCCGCGTGGCCCATGTGAGTCCT TCACCTTCTGCACGGGCATCCGTGTGGCCCATGTGAGTCCT < 41bp 0.838329578257641 0.614938784150952 0.36020476 0.21043766 prediction 0.44678158821338 Functional Loss - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151236493 chr1:151236495 synonymous SNV . 0 23 hm5C_associated_SNPs_79476 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:151236462-151236500
64251 chr1 181058297 181058297 1 + C T rs199708789 181058295 + 181058275 181058315 41 ACCCGCCGGCTGGGGAGAGCCGCCCCCGCCCGCCGCTCGTG ACCCGCCGGCTGGGGAGAGCCGTCCCCGCCCGCCGCTCGTG < 41bp 0.733213912475114 0.509828489959342 0.87161154 0.6661079 prediction 0.446770845031544 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058295 chr1:181058297 nonsynonymous SNV 0.386 0 23 hm5C_associated_SNPs_79480 0 0 1 RPS3 POSTAR2 ENCODE chr1:181058271-181058305
64251 chr6 96986556 96986556 1 + A C COAD 96986555 + 96986535 96986575 41 AAGATGCTGCCATATTGCTTCAGCAGGTGATGAGGGCATTC AAGATGCTGCCATATTGCTTCCGCAGGTGATGAGGGCATTC < 41bp 0.791328855805945 0.56794643075592 0.21343762 0.16370338 prediction 0.446764850100049 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96986555 chr6:96986556 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_79482 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:96986534-96986557
64251 chr2 27278095 27278095 1 + C T COAD 27278093 + 27278073 27278113 41 AGCTGATTCCCATGTTGAACCCCGATGGTGTGGTCCGGGGA AGCTGATTCCCATGTTGAACCCTGATGGTGTGGTCCGGGGA < 41bp 0.723380166994076 0.442962608291605 0.31566244 0.14654034 prediction 0.446760333988151 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278093 chr2:27278095 synonymous SNV . 0 23 hm5C_associated_SNPs_79486 0 0 2 PPIG POSTAR2 ENCODE chr2:27278068-27278141
64251 chr19 47673155 47673155 1 + G A rs145737324 47673152 + 47673132 47673172 41 GCAAAGGCTGCTCTGAAGCGCACGACCTCCGACTACTTTCT GCAAAGGCTGCTCTGAAGCGCACAACCTCCGACTACTTTCT < 41bp 0.786016034022168 0.562636106761226 0.10877618 0.06927186 prediction 0.446759854521884 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47673152 chr19:47673155 synonymous SNV . 0 24 hm5C_associated_SNPs_79487 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:47673155-47673180
64251 chr7 1024668 1024668 1 + G A SKCM 1024665 + 1024645 1024685 41 CTGCACAGCCTGGGCGTGGGCCGGGAGCCGGTGGCTGACAA CTGCACAGCCTGGGCGTGGGCCGAGAGCCGGTGGCTGACAA < 41bp 0.788398401003296 0.56502008373138 0.9154806 0.6095462 prediction 0.446756634543832 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1024665 chr7:1024668 synonymous SNV . 0 24 hm5C_associated_SNPs_79488 0 0 4 PPIG POSTAR2 ENCODE chr7:1024653-1024688
64251 chr3 180320089 180320089 1 + G T STAD 180320086 + 180320066 180320106 41 TGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCT TGCGGCAGTCGCTAAATTGCCACTGGTCGTCTTTGCTCTCT < 41bp 0.919449404224583 0.696071184290145 0.8933838 0.24156472 prediction 0.446756439868875 Functional Loss - TTC14 ENSG00000163728 CDS Human protein_coding chr3:180320086 chr3:180320089 nonsynonymous SNV 0.372 4 24 hm5C_associated_SNPs_79489 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:180320074-180320112
64251 chr9 140510463 140510463 1 - C T BRCA 140510466 - 140510446 140510486 41 CCCTTCGCCCTAAAGGAGAACTGGAATTTGAACCCAGAGCC CCCTTCGCCCTAAAGGAGAACTGAAATTTGAACCCAGAGCC < 41bp 0.783158629416949 0.559781173597231 0.3671502 0.8704626 prediction 0.446754911639437 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510466 chr9:140510463 stopgain . 0 24 hm5C_associated_SNPs_79490 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140510460-140510480
64251 chr14 90451011 90451011 1 + G A UCEC 90451008 + 90450988 90451028 41 GGATAGATGTCATTCACAAGCACGATCTCTCTGAAACAAAG GGATAGATGTCATTCACAAGCACAATCTCTCTGAAACAAAG < 41bp 0.72337553858701 0.493203098993247 0.096884936 0.07775304 prediction 0.446751077174019 Functional Loss - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90451008 chr14:90451011 nonsynonymous SNV 0.742 3 24 hm5C_associated_SNPs_79491 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:90451004-90451024
64251 chr16 69951744 69951744 1 + C T SKCM 69951742 + 69951722 69951762 41 GGCAGTCGCAGCGGAATCAGCTCCAGGGGGCCATGCAGCAC GGCAGTCGCAGCGGAATCAGCTTCAGGGGGCCATGCAGCAC < 41bp 0.863091450009554 0.639719705494168 0.8018236 0.2173726 prediction 0.446743489030772 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69951742 chr16:69951744 synonymous SNV . 0 23 hm5C_associated_SNPs_79492 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:69951726-69951753
64251 chr13 28854571 28854571 1 + A C HNSC 28854570 + 28854550 28854590 41 TATTTGTTGACTGACCAAAACAGGATGCGAAGTGTAAATGA TATTTGTTGACTGACCAAAACCGGATGCGAAGTGTAAATGA < 41bp 0.788279153772681 0.564907981476572 0.7580097 0.7852665 prediction 0.446742344592219 Functional Loss - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28854570 chr13:28854571 synonymous SNV . 0 22 hm5C_associated_SNPs_79493 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr13:28854554-28854584
64251 chr5 147821817 147821817 1 + C T rs148537296 147821815 + 147821795 147821835 41 ATGCAGTTGGGAGGTCCTGGCTCGGTTTGCTATATAGGGAA ATGCAGTTGGGAGGTCCTGGCTTGGTTTGCTATATAGGGAA < 41bp 0.816132581648521 0.592762524858665 0.17664275 0.1030792 prediction 0.446740113579711 Functional Loss - FBXO38 ENSG00000145868 UTR3 Human protein_coding chr5:147821815 chr5:147821817 . . 0 23 hm5C_associated_SNPs_79495 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:147821785-147821821
64251 chr19 55494101 55494101 1 + G A SKCM 55494098 + 55494078 55494118 41 CCCAGGGCCCTGAGGGACCTCCGGATCCTGGCGGAGGAGCC CCCAGGGCCCTGAGGGACCTCCGAATCCTGGCGGAGGAGCC < 41bp 0.798976734776877 0.575607566450697 0.8951538 0.86024475 prediction 0.44673833665236 Functional Loss - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494098 chr19:55494101 synonymous SNV . 0 24 hm5C_associated_SNPs_79497 0 0 2 FMR1 POSTAR2 ENCODE chr19:55494060-55494133
64251 chr16 30676984 30676984 1 + G A COAD 30676981 + 30676961 30677001 41 CACGAACCCTGAGCTGCCACCACGACTGGGGCCGGTGCCGA CACGAACCCTGAGCTGCCACCACAACTGGGGCCGGTGCCGA < 41bp 0.770770221743145 0.547402342206887 0.045300633 0.07735172 prediction 0.446735759072515 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30676981 chr16:30676984 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79499 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30676984-30676997
64251 chr19 42396123 42396123 1 + G T BRCA 42396120 + 42396100 42396140 41 GCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAG GCTGTCTGCATGCCGACATGCTGTGCTCACTGGGCCCCAAG < 41bp 0.723366503797732 0.32704643904043 0.66061234 0.1183207 prediction 0.446733007595465 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42396120 chr19:42396123 nonsynonymous SNV 0.951 1 24 hm5C_associated_SNPs_79501 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:42396119-42396149
64251 chr4 39109240 39109240 1 + G T LUAD 39109238 + 39109218 39109258 41 GCCGTAGGAGGACATGATGGCTGGAGCTATCTGAACACAGT GCCGTAGGAGGACATGATGGCTTGAGCTATCTGAACACAGT < 41bp 0.89786331504991 0.674497240187921 0.5490146 0.29421657 prediction 0.446732149723979 Functional Loss - KLHL5 ENSG00000109790 CDS Human protein_coding chr4:39109238 chr4:39109240 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_79502 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:39109221-39109245
64251 chr2 26410198 26410198 1 + C T CESC 26410196 + 26410176 26410216 41 GACTGCAAGGTGGGCGAGTCCTCTAGCCGCCCAGCCCCCGG GACTGCAAGGTGGGCGAGTCCTTTAGCCGCCCAGCCCCCGG < 41bp 0.833997852888771 0.610634714814418 0.88618755 0.1100027 prediction 0.446726276148706 Functional Loss - GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26410196 chr2:26410198 nonsynonymous SNV 0.877 1 23 hm5C_associated_SNPs_79508 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:26410198-26410199
64251 chr14 56763605 56763605 1 + G A UCEC 56763602 + 56763582 56763622 41 AACTGGGGCCATCGGAGTGACACGGAGGCCAACGAGAGGGA AACTGGGGCCATCGGAGTGACACAGAGGCCAACGAGAGGGA < 41bp 0.770616832169463 0.547259197907841 0.83496094 0.63882875 prediction 0.446715268523244 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56763602 chr14:56763605 synonymous SNV . 0 24 hm5C_associated_SNPs_79511 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:56763592-56763615
64251 chr14 103998985 103998985 1 + C T UCEC 103998983 + 103998963 103999003 41 GCACCCACGGGTCACCTGCACACGGTGGAGTTCCACCAGCA GCACCCACGGGTCACCTGCACATGGTGGAGTTCCACCAGCA < 41bp 0.802558212709795 0.579203882722033 0.6538817 0.81872773 prediction 0.446708659975524 Functional Loss - TRMT61A ENSG00000166166 CDS Human protein_coding chr14:103998983 chr14:103998985 nonsynonymous SNV 0.949 4 23 hm5C_associated_SNPs_79513 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:103998963-103999001
64251 chr2 103380843 103380843 1 + C T CESC 103380840 + 103380820 103380860 41 GCTTACCTGTCTCCGTACCCCTTCATGAGAGGCGAGCACAA GCTTACCTGTCTCCGTACCCCTTTATGAGAGGCGAGCACAA < 41bp 0.723347107928909 0.488341928257201 0.24114001 0.023042768 prediction 0.446694215857819 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103380840 chr2:103380843 synonymous SNV . 0 24 hm5C_associated_SNPs_79518 0 0 2 YBX3 POSTAR2 ENCODE chr2:103380821-103380882
64251 chr4 184367413 184367413 1 + G C CESC 184367409 + 184367389 184367429 41 ATCAGAGAGTGGGAACTCAGCTCGGAGCTCTGGCATCTCCA ATCAGAGAGTGGGAACTCAGCTCGCAGCTCTGGCATCTCCA < 41bp 0.838996365248961 0.615654126020692 0.3546339 0.16547361 prediction 0.446684478456538 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367409 chr4:184367413 synonymous SNV . 0 25 hm5C_associated_SNPs_79523 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:184367364-184367425
64251 chr12 118574060 118574060 1 + G T UCEC 118574057 + 118574037 118574077 41 GGTCCGGGCCCTTGAGCCTGCAAGAAGTGGACGAGCAGCCG GGTCCGGGCCCTTGAGCCTGCAATAAGTGGACGAGCAGCCG < 41bp 0.921951028794774 0.698610968321824 0.728902 0.42919216 prediction 0.4466801209459 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118574057 chr12:118574060 stopgain 0.999 1 24 hm5C_associated_SNPs_79529 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:118574031-118574060
64251 chr3 111604186 111604186 1 + G A SKCM 111604183 + 111604163 111604203 41 AAGCAGTATTAGCTCCATTTCAGGACGTGATGACCTGATGG AAGCAGTATTAGCTCCATTTCAGAACGTGATGACCTGATGG < 41bp 0.759820868720438 0.536491477466959 0.8787345 0.51149863 prediction 0.446658782506957 Functional Loss - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111604183 chr3:111604186 nonsynonymous SNV 0.979 4 24 hm5C_associated_SNPs_79531 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:111604180-111604200
64251 chr11 130013326 130013326 1 + G A SKCM 130013323 + 130013303 130013343 41 AGAACCCCACCTACAAATACCTGGAGCAGATGCAGATTTAG AGAACCCCACCTACAAATACCTGAAGCAGATGCAGATTTAG < 41bp 0.74593317992826 0.522605344712247 0.26724404 0.1046609 prediction 0.446655670432028 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:130013323 chr11:130013326 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_79532 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:130013262-130013326
64251 chr16 67914748 67914748 1 + G T LUSC 67914745 + 67914725 67914765 41 AGCTCGGCCCCCAGCTCGGGCTTGATGGAGGCCCTGGGGAT AGCTCGGCCCCCAGCTCGGGCTTTATGGAGGCCCTGGGGAT < 41bp 0.723327453316075 0.321693166524006 0.40344775 0.47904116 prediction 0.44665490663215 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914745 chr16:67914748 nonsynonymous SNV 0.968 2 24 hm5C_associated_SNPs_79533 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:67914740-67914760
64251 chr1 161480730 161480730 1 + G A STAD 161480727 + 161480707 161480747 41 GTAGTGGCCTTGATCTACTGCAGGAAAAAGCGGATTTCAGG GTAGTGGCCTTGATCTACTGCAGAAAAAAGCGGATTTCAGG < 41bp 0.784109885620183 0.560786653205708 0.5080596 0.17684653 prediction 0.446646464828951 Functional Loss - FCGR2A ENSG00000143226 CDS Human protein_coding chr1:161480727 chr1:161480730 synonymous SNV . 0 24 hm5C_associated_SNPs_79538 0 0 1 PRPF8 POSTAR2 ENCODE chr1:161480723-161480781
64251 chr16 12145791 12145791 1 + G A rs118191509 12145788 + 12145768 12145808 41 TGAGGAAGATGAGCAGAACTCTGGGGACGTGTTTAAAAAGA TGAGGAAGATGAGCAGAACTCTGAGGACGTGTTTAAAAAGA < 41bp 0.723320669713417 0.494958048501979 0.5453319 0.1468656 prediction 0.446641339426834 Functional Loss - SNX29 ENSG00000048471 CDS Human protein_coding chr16:12145788 chr16:12145791 nonsynonymous SNV 0.583 1 24 hm5C_associated_SNPs_79539 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:12145758-12145796
64251 chr4 100540230 100540230 1 + G A LUSC 100540227 + 100540207 100540247 41 TGGAGTTTAGCTTGTGGTATCGTGAGTCTAAAACCCGAGTG TGGAGTTTAGCTTGTGGTATCGTAAGTCTAAAACCCGAGTG < 41bp 0.748723650036265 0.525405733276155 0.7395444 0.6007809 prediction 0.446635833520221 Functional Loss - MTTP ENSG00000138823 CDS Human protein_coding chr4:100540227 chr4:100540230 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79542 0 0 2 LIN28B POSTAR2 ENCODE chr4:100540153-100540240
64251 chr20 33514954 33514954 1 + T C GBM 33514953 + 33514933 33514973 41 CCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATCTG CCATGACCTCGGGGACATGTCCACTGTGGCTGACCCATCTG < 41bp 0.723317910597423 0.474528163141227 0.16791552 0.120669305 prediction 0.446635821194846 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33514953 chr20:33514954 synonymous SNV . 0 22 hm5C_associated_SNPs_79543 0 0 2 DDX24 POSTAR2 ENCODE chr20:33514941-33514958
64251 chr15 100106199 100106199 1 + G C rs535240545 100106198 + 100106178 100106218 41 CCGGTGTGGGGATCCGTGCGCGGATGTCCCGGCGAGTCCCG CCGGTGTGGGGATCCGTGCGCCGATGTCCCGGCGAGTCCCG < 41bp 0.863456409494797 0.640141281706132 0.9047923 0.36045593 prediction 0.446630255577329 Functional Loss - MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106198 chr15:100106199 . . 0 22 hm5C_associated_SNPs_79545 0 0 2 DDX3X POSTAR2 ENCODE chr15:100106183-100106249
64251 chr19 15769357 15769357 1 + G A ESCA 15769354 + 15769334 15769374 41 ATCACAACCCAGCCGTGTGGCCGGACCCTGAGGTGCGGGCC ATCACAACCCAGCCGTGTGGCCGAACCCTGAGGTGCGGGCC < 41bp 0.723314650174399 0.474135531479113 0.40870818 0.21567401 prediction 0.446629300348798 Functional Loss - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15769354 chr19:15769357 nonsynonymous SNV 0.720 1 24 hm5C_associated_SNPs_79546 0 0 2 PPIG POSTAR2 ENCODE chr19:15769323-15769367
64251 chr4 6925579 6925579 1 + T C UCEC 6925578 + 6925558 6925598 41 CTGACCCGCAGCGATGATGTCTCCGTCTGCAGCGTGTCCAG CTGACCCGCAGCGATGATGTCCCCGTCTGCAGCGTGTCCAG < 41bp 0.723313178827537 0.453259648347776 0.4221411 0.22257489 prediction 0.446626357655075 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925578 chr4:6925579 nonsynonymous SNV 0.062 4 22 hm5C_associated_SNPs_79547 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr4:6925576-6925593
64251 chr20 61468506 61468506 1 + G T SARC 61468504 + 61468484 61468524 41 GTCCATTGGTCGGCCCGGTCCAGCTGGCCCCCCTGGGCCCC GTCCATTGGTCGGCCCGGTCCATCTGGCCCCCCTGGGCCCC < 41bp 0.723302945056781 0.366603069398762 0.46685067 0.14366135 prediction 0.446605890113562 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468504 chr20:61468506 nonsynonymous SNV 0.076 4 23 hm5C_associated_SNPs_79552 0 0 2 RPS3 POSTAR2 ENCODE chr20:61468505-61468527
64251 chr19 11474491 11474491 1 + G A UCEC 11474488 + 11474468 11474508 41 CCCCCACCATGGATAGCCCCCTCGAAAAGTTAAGTGTGGCG CCCCCACCATGGATAGCCCCCTCAAAAAGTTAAGTGTGGCG < 41bp 0.762515625982156 0.53921466593529 0.77203405 0.3039928 prediction 0.446601920093732 Functional Loss - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11474488 chr19:11474491 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79553 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:11474435-11474491
64251 chr19 11152043 11152043 1 + C T STAD 11152041 + 11152021 11152061 41 GGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACA GGTCCGGCAGAAGAAATCATCATGGAAGCGCAAGCGAGACA < 41bp 0.723293017038953 0.470748974065144 0.684327 0.84948516 prediction 0.446586034077905 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152041 chr19:11152043 nonsynonymous SNV 0.878 5 23 hm5C_associated_SNPs_79557 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:11152013-11152044
64251 chr19 11152044 11152044 1 + G A UCEC 11152041 + 11152021 11152061 41 GGTCCGGCAGAAGAAATCATCACGGAAGCGCAAGCGAGACA GGTCCGGCAGAAGAAATCATCACAGAAGCGCAAGCGAGACA < 41bp 0.723293017038953 0.498971027319071 0.684327 0.61122674 prediction 0.446586034077905 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152041 chr19:11152044 nonsynonymous SNV 0.922 4 24 hm5C_associated_SNPs_79558 3 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:11152013-11152044
64251 chr14 21961140 21961140 1 + G A UCEC 21961137 + 21961117 21961157 41 TTACAACAGATGCCACAGCCCCCGACTCAGCAGCAAGTTAC TTACAACAGATGCCACAGCCCCCAACTCAGCAGCAAGTTAC < 41bp 0.764231098594123 0.540942871112285 0.011057138 0.017421871 prediction 0.446576454963675 Functional Loss - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961137 chr14:21961140 synonymous SNV . 0 24 hm5C_associated_SNPs_79562 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:21961115-21961151
64251 chr9 132395060 132395060 1 + G A SKCM 132395057 + 132395037 132395077 41 TACTGGAAACAAATCCCACCCACGGTGGACGGCATGCTTGG TACTGGAAACAAATCCCACCCACAGTGGACGGCATGCTTGG < 41bp 0.773893994320585 0.550611265688915 0.40175086 0.15891808 prediction 0.44656545726334 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132395057 chr9:132395060 synonymous SNV . 0 24 hm5C_associated_SNPs_79566 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:132395033-132395060
64251 chr5 172395581 172395581 1 + C T rs17075427 172395579 + 172395559 172395599 41 AGGCCAACGGCACAACTGTCCACGTGGGCATTCACCCAAGC AGGCCAACGGCACAACTGTCCATGTGGGCATTCACCCAAGC < 41bp 0.817813572604468 0.594534817212346 0.37464303 0.36122495 prediction 0.446557510784244 Functional Loss - RPL26L1 ENSG00000037241 CDS Human protein_coding chr5:172395579 chr5:172395581 synonymous SNV . 0 23 hm5C_associated_SNPs_79569 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:172395558-172395595
64251 chr22 50962223 50962223 1 - G A UCEC 50962225 - 50962205 50962245 41 CCCAGGCTAGTCACAGTTACCGCGTGTACTACAATGCAGGC CCCAGGCTAGTCACAGTTACCGTGTGTACTACAATGCAGGC < 41bp 0.797460971301698 0.574186696347734 0.86253345 0.84747523 prediction 0.446548549907927 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962225 chr22:50962223 synonymous SNV . 0 23 hm5C_associated_SNPs_79570 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50962180-50962360
64251 chr19 44635117 44635117 1 + C T SKCM 44635115 + 44635095 44635135 41 GACTTAACCAGGTTTCAAGACTCCATGGTAAACAGCTTTCA GACTTAACCAGGTTTCAAGACTTCATGGTAAACAGCTTTCA < 41bp 0.72327241669127 0.452089668021264 0.9612755 0.27429056 prediction 0.446544833382539 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44635115 chr19:44635117 nonsynonymous SNV 0.017 2 23 hm5C_associated_SNPs_79573 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44635086-44635154
64251 chr1 236647387 236647387 1 + C T rs201710490 236647385 + 236647365 236647405 41 TGGGGAGCTTGGCAGAAGTTCACGGCCAGTGCAGGAATCCA TGGGGAGCTTGGCAGAAGTTCATGGCCAGTGCAGGAATCCA < 41bp 0.724040627218263 0.500769475550563 0.81722903 0.608542 prediction 0.446542303335399 Functional Loss - EDARADD ENSG00000244457 ncRNA_exonic Human transcribed_processed_pseudogene chr1:236647385 chr1:236647387 . . 0 23 hm5C_associated_SNPs_79574 1 0 1 LIN28B POSTAR2 ENCODE chr1:236647358-236647430
64251 chr5 80422965 80422965 1 + G A SARC 80422962 + 80422942 80422982 41 TGCAATAGCCACAGCTGCAGCAGGACATGGGAGTCCACCAG TGCAATAGCCACAGCTGCAGCAGAACATGGGAGTCCACCAG < 41bp 0.760232535807593 0.536963740762874 0.7873131 0.3084855 prediction 0.446537590089436 Functional Loss - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80422962 chr5:80422965 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79575 0 0 2 BUD13 POSTAR2 ENCODE chr5:80422929-80422985
64251 chr9 137023136 137023136 1 + G A rs35209649 137023133 + 137023113 137023153 41 TAAGTCCCTTTGCTCCTGCCCGCGAGAGACTGTCGGGAAGT TAAGTCCCTTTGCTCCTGCCCGCAAGAGACTGTCGGGAAGT < 41bp 0.74739712749217 0.524129159515014 0.7482134 0.36378267 prediction 0.446535935954311 Functional Loss - WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137023133 chr9:137023136 . . 0 24 hm5C_associated_SNPs_79576 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:137023080-137023160
64251 chr4 88977295 88977295 1 + C T SKCM 88977293 + 88977273 88977313 41 CCAGCTCTCGACAACCATGTCTCGATGTGCCAAAGACCTGT CCAGCTCTCGACAACCATGTCTTGATGTGCCAAAGACCTGT < 41bp 0.723266247759093 0.415097333406774 0.8723546 0.16879597 prediction 0.446532495518187 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88977293 chr4:88977295 stopgain 0.996 1 23 hm5C_associated_SNPs_79577 0 0 1 PPIG POSTAR2 ENCODE chr4:88977257-88977316
64251 chr4 88977296 88977296 1 + G A UCEC 88977293 + 88977273 88977313 41 CCAGCTCTCGACAACCATGTCTCGATGTGCCAAAGACCTGT CCAGCTCTCGACAACCATGTCTCAATGTGCCAAAGACCTGT < 41bp 0.723266247759093 0.494436676936231 0.8723546 0.31983018 prediction 0.446532495518187 Functional Loss - PKD2 ENSG00000118762 CDS Human protein_coding chr4:88977293 chr4:88977296 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_79578 0 0 1 PPIG POSTAR2 ENCODE chr4:88977257-88977316
64251 chr6 27782996 27782996 1 + G C LUSC 27782992 + 27782972 27783012 41 CCCGACACCGGCATCTCTTCCAAGGCTATGGGAATCATGAA CCCGACACCGGCATCTCTTCCAAGCCTATGGGAATCATGAA < 41bp 0.813358613108984 0.590094331136318 0.608209 0.36843014 prediction 0.446528563945333 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27782992 chr6:27782996 nonsynonymous SNV 0.868 2 25 hm5C_associated_SNPs_79580 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:27782993-27783026
64251 chr8 133829196 133829196 1 + A C GBM 133829195 + 133829175 133829215 41 GTGAGCGGAGAAGAAGATCTCAGCGTTTAGCCACCTTACCC GTGAGCGGAGAAGAAGATCTCCGCGTTTAGCCACCTTACCC < 41bp 0.779037917097768 0.555779023511343 0.75350296 0.4142978 prediction 0.446517787172849 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133829195 chr8:133829196 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_79584 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:133829171-133829206
64251 chr17 35872424 35872424 1 + G A LGG 35872421 + 35872401 35872441 41 ACCAAGGACTCTCATGGCCCCTCGGATGATTTCCGAGGGAG ACCAAGGACTCTCATGGCCCCTCAGATGATTTCCGAGGGAG < 41bp 0.748766866586605 0.525512526298112 0.11210781 0.22116148 prediction 0.446508680576985 Functional Loss - DUSP14 ENSG00000161326 CDS Human other chr17:35872421 chr17:35872424 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_79586 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:35872390-35872428
64251 chr6 37414178 37414178 1 + C T SKCM 37414175 + 37414155 37414195 41 GAAGAGGCTTGGGTCTGACACTCCGGGGCTTTGACCAGGAG GAAGAGGCTTGGGTCTGACACTCTGGGGCTTTGACCAGGAG < 41bp 0.756195729336111 0.532943124412451 0.22629592 0.18063444 prediction 0.44650520984732 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37414175 chr6:37414178 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_79591 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:37414171-37414192
64251 chr22 46704680 46704680 1 + G A LGG 46704677 + 46704657 46704697 41 TGGTGCCCAGGCCCGCCTCACCCGGGCGCCGGGGCCTCCGC TGGTGCCCAGGCCCGCCTCACCCAGGCGCCGGGGCCTCCGC < 41bp 0.817936223019948 0.594686319647669 0.5430089 0.14625975 prediction 0.446499806744556 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704677 chr22:46704680 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_79594 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:46704669-46704696
64251 chr11 34160751 34160751 1 + G A UCEC 34160748 + 34160728 34160768 41 TGTTGCCCAGAATGACCTGACCGGAGAGCACTCGTGCATCA TGTTGCCCAGAATGACCTGACCGAAGAGCACTCGTGCATCA < 41bp 0.774788323559349 0.551539632993634 0.30317423 0.061264187 prediction 0.44649738113143 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34160748 chr11:34160751 nonsynonymous SNV 0.925 4 24 hm5C_associated_SNPs_79595 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:34160719-34160757
64251 chr17 34854185 34854185 1 - C T SKCM 34854188 - 34854168 34854208 41 TGGGCTTGCCTCCAGCTCCCCAGGGGCAGCCCCAGTAGCTA TGGGCTTGCCTCCAGCTCCCCAGAGGCAGCCCCAGTAGCTA < 41bp 0.80250703206206 0.579264950270748 0.9349786 0.9234679 prediction 0.446484163582624 Functional Loss - MYO19 ENSG00000141140 CDS Human other chr17:34854188 chr17:34854185 synonymous SNV . 0 24 hm5C_associated_SNPs_79596 0 0 2 BUD13 POSTAR2 ENCODE chr17:34854182-34854209
64251 chr2 219292964 219292964 1 + G A SKCM 219292961 + 219292941 219292981 41 GCTCCCTAGGTAGAGATGTCCTGGAAGAGTTTCAACCGAGG GCTCCCTAGGTAGAGATGTCCTGAAAGAGTTTCAACCGAGG < 41bp 0.764257693387458 0.541015770843847 0.45546794 0.3470912 prediction 0.446483845087222 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219292961 chr2:219292964 stopgain 0.994 1 24 hm5C_associated_SNPs_79597 0 0 4 EFTUD2 POSTAR2 ENCODE chr2:219292914-219292966
64251 chr17 76203000 76203000 1 + G A BLCA 76202997 + 76202977 76203017 41 CTCTTCCTGTTCCAGATTATCTTGAAAACAATCTTCCAGTA CTCTTCCTGTTCCAGATTATCTTAAAAACAATCTTCCAGTA < 41bp 0.723235623118537 0.490401975181796 0.16662201 0.22628045 prediction 0.446471246237074 Functional Loss - AFMID ENSG00000183077 CDS Human protein_coding chr17:76202997 chr17:76203000 nonsynonymous SNV 0.948 0 24 hm5C_associated_SNPs_79601 0 0 2 GPKOW POSTAR2 ENCODE chr17:76202964-76203019
64251 chr12 57911162 57911162 1 + A C SKCM 57911158 + 57911138 57911178 41 GCTCCCAGCTGGACAGTGTCCCGAAGGAGAAAGGCAATGAC GCTCCCAGCTGGACAGTGTCCCGACGGAGAAAGGCAATGAC < 41bp 0.723234142323665 0.315085566421147 0.736781 0.7866374 prediction 0.44646828464733 Functional Loss - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911158 chr12:57911162 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_79603 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:57911158-57911217
64251 chr13 113975949 113975949 1 + G T LUAD 113975947 + 113975927 113975967 41 CAATTCCTACAAGTGCAACGCGGAGGAGCACGTCCGTGTCA CAATTCCTACAAGTGCAACGCGTAGGAGCACGTCCGTGTCA < 41bp 0.723233633086552 0.362659432253004 0.8516857 0.29394162 prediction 0.446467266173104 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113975947 chr13:113975949 stopgain 0.059 1 23 hm5C_associated_SNPs_79604 0 0 6 RPS3 POSTAR2 ENCODE chr13:113975941-113975954
64251 chr19 55857910 55857910 1 + G A UCEC 55857907 + 55857887 55857927 41 CGAACCAGGCCTAGGGAGCCCGCGTTGCCACCACGGCCCCT CGAACCAGGCCTAGGGAGCCCGCATTGCCACCACGGCCCCT < 41bp 0.723222523420975 0.469139815648645 0.3892551 0.15321654 prediction 0.446445046841951 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857907 chr19:55857910 synonymous SNV . 0 24 hm5C_associated_SNPs_79611 0 0 4 BUD13 POSTAR2 ENCODE chr19:55857867-55857972
64251 chr2 176987812 176987812 1 + G A COAD 176987809 + 176987789 176987829 41 CGTACGTTCCCCCGCCGCCCCTGGCCGCCTCTGCCTCCGAG CGTACGTTCCCCCGCCGCCCCTGACCGCCTCTGCCTCCGAG < 41bp 0.789997253095778 0.566774901214032 0.065892816 0.022508472 prediction 0.446444703763493 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176987809 chr2:176987812 nonsynonymous SNV 0.492 1 24 hm5C_associated_SNPs_79612 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:176987793-176987821
64251 chr15 40708534 40708534 1 + G A UCEC 40708531 + 40708511 40708551 41 ACTCAGCTGAGTGTGCCACACAGGTAGCCCTGGACGGCATT ACTCAGCTGAGTGTGCCACACAGATAGCCCTGGACGGCATT < 41bp 0.723221773250731 0.477946329487151 0.45935956 0.12114051 prediction 0.446443546501461 Functional Loss - IVD ENSG00000128928 CDS Human protein_coding chr15:40708531 chr15:40708534 nonsynonymous SNV 0.980 2 24 hm5C_associated_SNPs_79614 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40708509-40708541
64251 chr20 31023408 31023408 1 + C T COAD 31023406 + 31023386 31023426 41 TTCACTCTGGACTGTGCCATCTCGAGGAGGCAGTGACAGCA TTCACTCTGGACTGTGCCATCTTGAGGAGGCAGTGACAGCA < 41bp 0.846336564972731 0.623130471268688 0.5032484 0.29493612 prediction 0.446412187408088 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31023406 chr20:31023408 stopgain 0.006 0 23 hm5C_associated_SNPs_79621 2 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr20:31023366-31023409
64251 chr19 19218737 19218737 1 + T C COAD 19218736 + 19218716 19218756 41 TTTCATGTCTTCATCCGCATCTCGAGAGAAGAGGGGCTGAA TTTCATGTCTTCATCCGCATCCCGAGAGAAGAGGGGCTGAA < 41bp 0.839274762444739 0.616069392475309 0.91669613 0.2784856 prediction 0.446410739938859 Functional Loss - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19218736 chr19:19218737 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_79622 0 0 1 PUM2 POSTAR2 ENCODE chr19:19218701-19218759
64251 chr12 51089667 51089667 1 + G T UCEC 51089665 + 51089645 51089685 41 GTAAAATGTCGGGACTTGCACTGGGCTATGATGGCACATCG GTAAAATGTCGGGACTTGCACTTGGCTATGATGGCACATCG < 41bp 0.723203183942726 0.383442613385609 0.69543105 0.14529535 prediction 0.446406367885453 Functional Loss - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51089665 chr12:51089667 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_79625 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr12:51089645-51089674
64251 chr3 69134225 69134225 1 + C T STAD 69134223 + 69134203 69134243 41 ACGTTAATATCGCCCCACTCCGCGCCTGGGACGATTTCTTC ACGTTAATATCGCCCCACTCCGTGCCTGGGACGATTTCTTC < 41bp 0.810883687015767 0.587692940332288 0.534459 0.31082293 prediction 0.446381493366959 Functional Loss - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69134223 chr3:69134225 synonymous SNV . 0 23 hm5C_associated_SNPs_79633 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:69134217-69134255
64251 chr15 90766816 90766816 1 + T C STAD 90766815 + 90766795 90766835 41 ATGAGGGTGGAGAGCGGGTGCTACAGCAGCGCTGGACCTCC ATGAGGGTGGAGAGCGGGTGCCACAGCAGCGCTGGACCTCC < 41bp 0.809057684622294 0.585867290157563 0.93108124 0.694807 prediction 0.446380788929462 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90766815 chr15:90766816 nonsynonymous SNV 0.633 4 22 hm5C_associated_SNPs_79634 0 0 1 SF3B4 POSTAR2 ENCODE chr15:90766772-90766817
64251 chr12 113822701 113822701 1 + G T LUAD 113822699 + 113822679 113822719 41 TGGACTACAAGGCGTTCATCCCGGGTGGGCCCAGCCCCGGG TGGACTACAAGGCGTTCATCCCTGGTGGGCCCAGCCCCGGG < 41bp 0.723189778191617 0.360889483529673 0.9229423 0.3948506 prediction 0.446379556383235 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113822699 chr12:113822701 synonymous SNV . 0 23 hm5C_associated_SNPs_79636 0 0 4 RPS3 POSTAR2 ENCODE chr12:113822692-113822727
64251 chr11 45949843 45949843 1 + C T UCEC 45949841 + 45949821 45949861 41 TGAACCCTACGTGGTGGTGCCACGAGACTGTCCCCGCTATG TGAACCCTACGTGGTGGTGCCATGAGACTGTCCCCGCTATG < 41bp 0.84021103773699 0.617024235425329 0.7636052 0.5018218 prediction 0.446373604623323 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949841 chr11:45949843 stopgain 0.259 1 23 hm5C_associated_SNPs_79637 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:45949828-45949861
64251 chr11 65292702 65292702 1 + C T COAD 65292700 + 65292680 65292720 41 AGCCCCCAGAGGGCGGCCTGCCCGGGCCCTGGGCCCTGCAC AGCCCCCAGAGGGCGGCCTGCCTGGGCCCTGGGCCCTGCAC < 41bp 0.755339850809649 0.53215589491129 0.7675041 0.2976176 prediction 0.44636791179672 Functional Loss - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65292700 chr11:65292702 synonymous SNV . 0 23 hm5C_associated_SNPs_79639 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65292688-65292717
64251 chr19 35540289 35540289 1 + G C COAD 35540285 + 35540265 35540305 41 ACAGCCATCGGGGCGGCATCCTGGGCCATTGGTGAGAGCGG ACAGCCATCGGGGCGGCATCCTGGCCCATTGGTGAGAGCGG < 41bp 0.862351124875043 0.639168290771317 0.91790974 0.7501217 prediction 0.446365668207453 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35540285 chr19:35540289 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_79640 0 0 2 DDX3X POSTAR2 ENCODE chr19:35540247-35540294
64251 chr2 74328855 74328855 1 + T C COAD 74328854 + 74328834 74328874 41 CGGACAGTGAACACAACTTCCTGGACGAGAACATCGGCGGC CGGACAGTGAACACAACTTCCCGGACGAGAACATCGGCGGC < 41bp 0.775576021518496 0.552394869170563 0.34589204 0.5211056 prediction 0.446362304695865 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74328854 chr2:74328855 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_79641 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:74328840-74328860
64251 chr2 220313370 220313370 1 + A T rs146216760 220313366 + 220313346 220313386 41 ACCTCGAGCTGCGCTTCGCCCAGGAGCTGGGCCGCATCCGC ACCTCGAGCTGCGCTTCGCCCAGGTGCTGGGCCGCATCCGC < 41bp 0.849182144375034 0.626015252347364 0.92179227 0.9278126 prediction 0.44633378405534 Functional Loss - SPEG ENSG00000072195 CDS Human protein_coding chr2:220313366 chr2:220313370 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_79650 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:220313355-220313393
64251 chr19 36269977 36269977 1 + G A COAD 36269974 + 36269954 36269994 41 GCAGTACCTGGAGACACTGTCAGGACTGGTGGACAGTAACC GCAGTACCTGGAGACACTGTCAGAACTGGTGGACAGTAACC < 41bp 0.752938155468483 0.529777683458314 0.92369473 0.90591294 prediction 0.446320944020339 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36269974 chr19:36269977 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_79653 0 0 2 DDX24 POSTAR2 ENCODE chr19:36269957-36270014
64251 chr17 41570931 41570931 1 + G T SARC 41570929 + 41570909 41570949 41 AGTCAAAGTGCTGTCCTTCACTGGGACCAAGACCAGCCTGA AGTCAAAGTGCTGTCCTTCACTTGGACCAAGACCAGCCTGA < 41bp 0.908380909426987 0.685223045057237 0.8522365 0.15862957 prediction 0.446315728739501 Functional Loss - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570929 chr17:41570931 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_79655 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:41570919-41570943
64251 chr3 128976392 128976392 1 + G A STAD 128976389 + 128976369 128976409 41 TAAGATGATCAGCAAGGTCACACGGCATGGCCTTAAGTCTC TAAGATGATCAGCAAGGTCACACAGCATGGCCTTAAGTCTC < 41bp 0.781552806353264 0.558395176894403 0.09905839 0.03884095 prediction 0.446315258917722 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128976389 chr3:128976392 nonsynonymous SNV 0.063 1 24 hm5C_associated_SNPs_79657 0 0 1 FXR2 POSTAR2 ENCODE chr3:128976373-128976410
64251 chr17 30808080 30808080 1 + C T rs187088367 30808078 + 30808058 30808098 41 TCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCCGCC TCTGCCTCCTGGGAGAGGGCCGTAAAGCCAGGCACCCCGCC < 41bp 0.818922408713508 0.595770760532986 0.5915562 0.7126752 prediction 0.446303296361043 Functional Loss - PSMD11 ENSG00000108671 UTR3 Human protein_coding chr17:30808078 chr17:30808080 . . 0 23 hm5C_associated_SNPs_79660 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:30808044-30808082
64251 chr2 239040032 239040032 1 + G T LUAD 239040029 + 239040009 239040049 41 TCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGC TCTTCGAGCACCTGGGCACCCACTGCTGGGAGGCTGTGCGC < 41bp 0.931672463680644 0.708522956047393 0.40027204 0.13565353 prediction 0.446299015266501 Functional Loss - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239040029 chr2:239040032 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_79661 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:239040024-239040044
64251 chr19 48965467 48965467 1 + T C COAD 48965466 + 48965446 48965486 41 CACCGAGGAGTGCCCGGCCGCTGTGGCCGCCGTGGTGCTGC CACCGAGGAGTGCCCGGCCGCCGTGGCCGCCGTGGTGCTGC < 41bp 0.723145122779175 0.498624953926442 0.14219588 0.30692303 prediction 0.44629024555835 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48965466 chr19:48965467 synonymous SNV . 0 22 hm5C_associated_SNPs_79664 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:48965460-48965480
64251 chr15 32983916 32983916 1 + G T UCEC 32983913 + 32983893 32983933 41 CTTTTCTCCCCATTCTAGAACAAGAAACTCCTTTACGAGAA CTTTTCTCCCCATTCTAGAACAATAAACTCCTTTACGAGAA < 41bp 0.723142010108131 0.339349671750041 0.3734054 0.13922906 prediction 0.446284020216263 Functional Loss - SCG5 ENSG00000166922 CDS Human protein_coding chr15:32983913 chr15:32983916 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_79667 0 0 1 U2AF2 POSTAR2 ENCODE chr15:32983892-32983967
64251 chr12 121434170 121434170 1 + C T LGG 121434168 + 121434148 121434188 41 CCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA CCCCTCCACCAAGTGTCCCCCATGGGCCTGGAGCCCAGCCA < 41bp 0.72312164446887 0.463474364537575 0.23930895 0.18958107 prediction 0.446243288937739 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121434168 chr12:121434170 nonsynonymous SNV 0.933 3 23 hm5C_associated_SNPs_79679 0 0 1 PPIG POSTAR2 ENCODE chr12:121434139-121434217
64251 chr12 121434171 121434171 1 + G A LUSC 121434168 + 121434148 121434188 41 CCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA CCCCTCCACCAAGTGTCCCCCACAGGCCTGGAGCCCAGCCA < 41bp 0.72312164446887 0.479120232596974 0.23930895 0.06336686 prediction 0.446243288937739 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121434168 chr12:121434171 synonymous SNV . 0 24 hm5C_associated_SNPs_79680 0 0 1 PPIG POSTAR2 ENCODE chr12:121434139-121434217
64251 chr1 45809251 45809251 1 + T C STAD 45809250 + 45809230 45809270 41 CAGCTCTGGACCCTGGCTCCCTGAATGCCACAATAAGGTAT CAGCTCTGGACCCTGGCTCCCCGAATGCCACAATAAGGTAT < 41bp 0.723110084269777 0.469064598572794 0.31349418 0.323022 prediction 0.446220168539554 Functional Loss - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45809250 chr1:45809251 synonymous SNV . 0 22 hm5C_associated_SNPs_79685 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45809229-45809262
64251 chr10 72637005 72637005 1 + A C LUSC 72637001 + 72636981 72637021 41 TGTTGACAGGAATATGGTTGCAGAATTGTCCTCAGTCTTCT TGTTGACAGGAATATGGTTGCAGACTTGTCCTCAGTCTTCT < 41bp 0.723105251641865 0.332101688426179 0.30109727 0.2999307 prediction 0.446210503283729 Functional Loss - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72637001 chr10:72637005 nonsynonymous SNV 0.584 0 25 hm5C_associated_SNPs_79686 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:72637000-72637028
64251 chr13 96438249 96438249 1 + G T UCEC 96438246 + 96438226 96438266 41 ATGAAAATGATCAGCAGATTCGAGAAGGTCTAGAGAAAGCA ATGAAAATGATCAGCAGATTCGATAAGGTCTAGAGAAAGCA < 41bp 0.723100961510593 0.354661046677192 0.6626748 0.20162958 prediction 0.446201923021187 Functional Loss - DNAJC3 ENSG00000102580 CDS Human protein_coding chr13:96438246 chr13:96438249 stopgain 1.000 1 24 hm5C_associated_SNPs_79691 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:96438224-96438256
64251 chr19 9271193 9271193 1 + C T UCEC 9271191 + 9271171 9271211 41 GGAAATGCATTCCGGACCCTCTCGGCCCTGAAAATCCACAT GGAAATGCATTCCGGACCCTCTTGGCCCTGAAAATCCACAT < 41bp 0.723099273969798 0.4542409956057 0.050950766 0.023017317 prediction 0.446198547939597 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271191 chr19:9271193 nonsynonymous SNV 0.888 2 23 hm5C_associated_SNPs_79692 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:9271173-9271200
64251 chr10 134014424 134014424 1 + G A CESC 134014421 + 134014401 134014441 41 GCTGTGGGCAAGGACAACTTCGCGCTGATCCCCGAGGGCAC GCTGTGGGCAAGGACAACTTCGCACTGATCCCCGAGGGCAC < 41bp 0.801156000343894 0.578057506033502 0.23404792 0.10095623 prediction 0.446196988620783 Functional Loss - DPYSL4 ENSG00000151640 CDS Human protein_coding chr10:134014421 chr10:134014424 synonymous SNV . 0 24 hm5C_associated_SNPs_79693 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:134014423-134014424
64251 chr16 56870627 56870627 1 + A C rs199678770 56870626 + 56870606 56870646 41 GCAAAGCTGTATGACCTTGCCAAGGTAAAGTGTGCCCACTT GCAAAGCTGTATGACCTTGCCCAGGTAAAGTGTGCCCACTT < 41bp 0.723097288271791 0.454446415067426 0.88743675 0.50641197 prediction 0.446194576543581 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56870626 chr16:56870627 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_79695 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:56870586-56870631
64251 chr19 1043061 1043061 1 + G T LUSC 1043058 + 1043038 1043078 41 AGCTCCTGGCGCTGCGCAGCCTGGTGGAGCTTCGGGCACTG AGCTCCTGGCGCTGCGCAGCCTGTTGGAGCTTCGGGCACTG < 41bp 0.723093161446873 0.329400010199729 0.7091441 0.33483368 prediction 0.446186322893745 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043058 chr19:1043061 nonsynonymous SNV 0.080 1 24 hm5C_associated_SNPs_79698 0 0 4 DDX24 POSTAR2 ENCODE chr19:1043041-1043100
64251 chr5 140032679 140032679 1 + G A UCEC 140032676 + 140032656 140032696 41 AACAAAGATTATGAAGAAACCGAGCTTATCAGCACCACAGC AACAAAGATTATGAAGAAACCGAACTTATCAGCACCACAGC < 41bp 0.723088491072423 0.48197442688392 0.18043122 0.044605553 prediction 0.446176982144847 Functional Loss - IK ENSG00000113141 CDS Human protein_coding chr5:140032676 chr5:140032679 synonymous SNV . 0 24 hm5C_associated_SNPs_79699 0 0 14 CPSF3 POSTAR2 GSE37401,GSM917669 chr5:140032671-140032695
64251 chr4 1807586 1807586 1 + C T GBM 1807584 + 1807564 1807604 41 CCTTCGACACCTGCAAGCCGCCCGAGGAGCAGCTCACCTTC CCTTCGACACCTGCAAGCCGCCTGAGGAGCAGCTCACCTTC < 41bp 0.723080759615984 0.448984851892635 0.13662034 0.2316713 prediction 0.446161519231968 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807584 chr4:1807586 synonymous SNV . 0 23 hm5C_associated_SNPs_79706 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:1807585-1807586
64251 chr4 119621742 119621742 1 + G A UCEC 119621739 + 119621719 119621759 41 AATTGATGAGATTGCAGCACCTCGATCATTTATTTTTCTCT AATTGATGAGATTGCAGCACCTCAATCATTTATTTTTCTCT < 41bp 0.751580002814271 0.528503462703409 0.78107476 0.82646513 prediction 0.446153080221724 Functional Loss - METTL14 ENSG00000145388 CDS Human protein_coding chr4:119621739 chr4:119621742 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_79711 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:119621702-119621745
64251 chr8 94713595 94713595 1 + C T STAD 94713593 + 94713573 94713613 41 CTCCTGGTGAATGAAATTAACGCGTATGCTGCTACAGAGAC CTCCTGGTGAATGAAATTAACGTGTATGCTGCTACAGAGAC < 41bp 0.825536116324811 0.602462927513399 0.0481337 0.075690866 prediction 0.446146377622824 Functional Loss - FAM92A ENSG00000188343 CDS Human protein_coding chr8:94713593 chr8:94713595 nonsynonymous SNV 0.229 0 23 hm5C_associated_SNPs_79714 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:94713595-94713596
64251 chr11 119052898 119052898 1 + C T PRAD 119052896 + 119052876 119052916 41 ACGCACCTGTCCCTGCTGCACACGGGCCTTGGGGACGAAGG ACGCACCTGTCCCTGCTGCACATGGGCCTTGGGGACGAAGG < 41bp 0.723072862816262 0.460639453685483 0.23503745 0.24473763 prediction 0.446145725632523 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119052896 chr11:119052898 nonsynonymous SNV 0.987 3 23 hm5C_associated_SNPs_79715 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:119052893-119052912
64251 chr20 25655801 25655801 1 - G A GBM 25655803 - 25655783 25655823 41 ACTGTGCATGAAAGAATACACACAGGAGAGAGGCCTTATGA ACTGTGCATGAAAGAATACACATAGGAGAGAGGCCTTATGA < 41bp 0.723070340199543 0.472654069792392 0.016441882 0.057398528 prediction 0.446140680399085 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25655803 chr20:25655801 nonsynonymous SNV 0.033 1 23 hm5C_associated_SNPs_79717 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:25655791-25655842
64251 chr16 69968028 69968028 1 + C T UCEC 69968026 + 69968006 69968046 41 CGCTTTATAGGCAGATTCATCGCCATGGTAAGGGGGCCCCA CGCTTTATAGGCAGATTCATCGTCATGGTAAGGGGGCCCCA < 41bp 0.847877951413606 0.624807927147105 0.40765458 0.14273569 prediction 0.446140048533001 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69968026 chr16:69968028 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_79718 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:69968007-69968032
64251 chr19 44501451 44501451 1 + A C PAAD 44501447 + 44501427 44501467 41 ATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGT ATCATAAGAGACTCCACTGCCAGACAAAACCATTCAAATGT < 41bp 0.723069119926856 0.320213082763789 0.6909652 0.53147495 prediction 0.446138239853712 Functional Loss - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44501447 chr19:44501451 nonsynonymous SNV 0.005 1 25 hm5C_associated_SNPs_79720 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44501449-44501477
64251 chr4 74735480 74735480 1 + C T PRAD 74735478 + 74735458 74735498 41 AAAGTGTGAACGTGAAGTCCCCCGGACCCCACTGCGCCCAA AAAGTGTGAACGTGAAGTCCCCTGGACCCCACTGCGCCCAA < 41bp 0.805277707301812 0.58221121890743 0.13870525 0.18814489 prediction 0.446132976788764 Functional Loss - CXCL1 ENSG00000163739 CDS Human protein_coding chr4:74735478 chr4:74735480 synonymous SNV . 0 23 hm5C_associated_SNPs_79723 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:74735457-74735487
64251 chr11 68682320 68682320 1 + C T rs76707931 68682317 + 68682297 68682337 41 TGCTGCGCCCCCTCCAACATCGCCGTGGACAATCTGGTGGA TGCTGCGCCCCCTCCAACATCGCTGTGGACAATCTGGTGGA < 41bp 0.723787094649552 0.50072302081321 0.48205033 0.28259033 prediction 0.446128147672686 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68682317 chr11:68682320 synonymous SNV . 0 24 hm5C_associated_SNPs_79724 2 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68682288-68682326
64251 chr8 124449545 124449545 1 + C T STAD 124449542 + 124449522 124449562 41 CAGTGGGAATTGGAGAGAGCCTCCGCCGCCATATCCCTGCA CAGTGGGAATTGGAGAGAGCCTCTGCCGCCATATCCCTGCA < 41bp 0.739220878996234 0.516165296096432 0.046838284 0.04791981 prediction 0.446111165799602 Functional Loss - WDYHV1 ENSG00000156795 CDS Human protein_coding chr8:124449542 chr8:124449545 nonsynonymous SNV 0.540 2 24 hm5C_associated_SNPs_79730 0 0 1 PPIG POSTAR2 ENCODE chr8:124449512-124449570
64251 chr5 6753081 6753081 1 + C T ACC 6753079 + 6753059 6753099 41 CTGCGTCTTTGAAAGCCGTCCACCACATGTCTTCCCCGGCC CTGCGTCTTTGAAAGCCGTCCATCACATGTCTTCCCCGGCC < 41bp 0.723052888368243 0.426512705022497 0.044208884 0.10056919 prediction 0.446105776736486 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6753079 chr5:6753081 synonymous SNV . 0 23 hm5C_associated_SNPs_79731 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr5:6753049-6753083
64251 chr17 79970071 79970071 1 + G A LUSC 79970068 + 79970048 79970088 41 GCGCATGGATGGGCGAGGTCCACGGTGCTTCCTAACACGTA GCGCATGGATGGGCGAGGTCCACAGTGCTTCCTAACACGTA < 41bp 0.723052343073176 0.478927434718992 0.31680346 0.21225742 prediction 0.446104686146352 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79970068 chr17:79970071 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_79732 0 0 2 SF3B4 POSTAR2 ENCODE chr17:79970064-79970111
64251 chr17 79970070 79970070 1 + C T LUSC 79970068 + 79970048 79970088 41 GCGCATGGATGGGCGAGGTCCACGGTGCTTCCTAACACGTA GCGCATGGATGGGCGAGGTCCATGGTGCTTCCTAACACGTA < 41bp 0.723052343073176 0.485567849822813 0.31680346 0.20309591 prediction 0.446104686146352 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79970068 chr17:79970070 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_79733 0 0 2 SF3B4 POSTAR2 ENCODE chr17:79970064-79970111
64251 chr19 47422356 47422356 1 + G A LUSC 47422353 + 47422333 47422373 41 TTTGCACTGACCAGCTGGGGCTGGAGCAGGACTTTGAGCAG TTTGCACTGACCAGCTGGGGCTGAAGCAGGACTTTGAGCAG < 41bp 0.774202894656452 0.551154628263075 0.71631765 0.8320067 prediction 0.446096532786753 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422353 chr19:47422356 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_79734 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47422306-47422367
64251 chr1 65858333 65858333 1 + C T UCEC 65858330 + 65858310 65858350 41 CCTTTTGGGCCTGGAAGGGTCTGCAATGAGTAACAGCTTCT CCTTTTGGGCCTGGAAGGGTCTGTAATGAGTAACAGCTTCT < 41bp 0.751003958760217 0.527957858315477 0.1671119 0.0367662 prediction 0.446092200889482 Functional Loss - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65858330 chr1:65858333 nonsynonymous SNV 0.919 1 24 hm5C_associated_SNPs_79735 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:65858308-65858337
64251 chr8 145748612 145748612 1 + G A rs530716231 145748609 + 145748589 145748629 41 GCTGTGAGCTCCAGCGGCTGCACGTGGACAGAGGGCGGAAT GCTGTGAGCTCCAGCGGCTGCACATGGACAGAGGGCGGAAT < 41bp 0.747208946816767 0.52416345758408 0.7059834 0.4107858 prediction 0.446090978465375 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145748609 chr8:145748612 synonymous SNV . 0 24 hm5C_associated_SNPs_79736 0 0 1 RBM15 POSTAR2 ENCODE chr8:145748583-145748617
64251 chr19 18960951 18960951 1 + G A SKCM 18960948 + 18960928 18960968 41 CCCTGCACAAGGACGGGCCCCTGGGGGAGACAGTCCTGGAG CCCTGCACAAGGACGGGCCCCTGAGGGAGACAGTCCTGGAG < 41bp 0.792394532202163 0.569351494478408 0.89175564 0.34155083 prediction 0.44608607544751 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18960948 chr19:18960951 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_79737 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18960923-18960965
64251 chr10 101458417 101458417 1 + G T STAD 101458414 + 101458394 101458434 41 CATGTCCGAGGAAGAGGAGACTGGGTGTCTTGTGGGGCAAT CATGTCCGAGGAAGAGGAGACTGTGTGTCTTGTGGGGCAAT < 41bp 0.723036532213604 0.322845498077129 0.9060336 0.599974 prediction 0.446073064427207 Functional Loss - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101458414 chr10:101458417 nonsynonymous SNV 0.627 4 24 hm5C_associated_SNPs_79741 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:101458394-101458431
64251 chr19 50905180 50905180 1 + T C UCEC 50905179 + 50905159 50905199 41 CTTCTACACCCCAGCGCCCCCTGGTGAGTGGCCCCTACCCA CTTCTACACCCCAGCGCCCCCCGGTGAGTGGCCCCTACCCA < 41bp 0.754511762956543 0.531475368067197 0.13702732 0.37684026 prediction 0.446072789778692 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905179 chr19:50905180 synonymous SNV . 0 22 hm5C_associated_SNPs_79742 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50905143-50905181
64251 chr10 135122932 135122932 1 + G T LUAD 135122929 + 135122909 135122949 41 CGCCACCTCTACCTCCAGGACGTGATCATGCAGGTGGCCGA CGCCACCTCTACCTCCAGGACGTTATCATGCAGGTGGCCGA < 41bp 0.723034379987354 0.420394097009771 0.131329 0.0603832 prediction 0.446068759974707 Functional Loss - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135122929 chr10:135122932 synonymous SNV . 0 24 hm5C_associated_SNPs_79744 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:135122908-135122945
64251 chr10 76910458 76910458 1 + G A UCEC 76910455 + 76910435 76910475 41 ATGATCTCCGGTCTCCTCCTCTGGAAATCAAAGTCTTAGGG ATGATCTCCGGTCTCCTCCTCTGAAAATCAAAGTCTTAGGG < 41bp 0.723033236312534 0.48869284809911 0.20683315 0.070073545 prediction 0.446066472625069 Functional Loss - SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76910455 chr10:76910458 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_79745 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr10:76910408-76910460
64251 chr17 76167650 76167650 1 + A C UCEC 76167649 + 76167629 76167669 41 CTCACCAACCAGTGGGCAGTCACCAACCCGAAGGACGTGCT CTCACCAACCAGTGGGCAGTCCCCAACCCGAAGGACGTGCT < 41bp 0.814520937451098 0.5914892012199 0.5723194 0.2550094 prediction 0.446063472462397 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167649 chr17:76167650 nonsynonymous SNV 0.064 4 22 hm5C_associated_SNPs_79746 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:76167640-76167660
64251 chr3 14178569 14178569 1 + G A rs559288100 14178566 + 14178546 14178586 41 TCAAGGCAGCAGACAGGCATCAGGGGTTAGCTGTGACCTTT TCAAGGCAGCAGACAGGCATCAGAGGTTAGCTGTGACCTTT < 41bp 0.724746677523254 0.501715964238556 0.9249028 0.8632977 prediction 0.446061426569396 Functional Loss - TMEM43 ENSG00000170876;ENSG00000268279 intronic Human other chr3:14178566 chr3:14178569 . . 0 24 hm5C_associated_SNPs_79747 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:14178559-14178586
64251 chr5 32594752 32594752 1 + C T rs12653236 32594750 + 32594730 32594770 41 TGTGTGAGTGAACATTGCAGCCCGAGCTCTGCCTCCTGTCA TGTGTGAGTGAACATTGCAGCCTGAGCTCTGCCTCCTGTCA < 41bp 0.777599138828721 0.554569012541267 0.10980898 0.05426097 prediction 0.446060252574908 Functional Loss - SUB1 ENSG00000113387 UTR3 Human protein_coding chr5:32594750 chr5:32594752 . . 0 23 hm5C_associated_SNPs_79748 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:32594697-32594774
64251 chr19 49671839 49671839 1 + C T UCEC 49671837 + 49671817 49671857 41 TCCCTGCGAGGTACCGGTGGCGCGGTGACCCGGAGGACGGG TCCCTGCGAGGTACCGGTGGCGTGGTGACCCGGAGGACGGG < 41bp 0.723027894754301 0.463465090105308 0.8175845 0.6458427 prediction 0.446055789508601 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671837 chr19:49671839 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_79749 0 0 1 DDX24 POSTAR2 ENCODE chr19:49671822-49671854
64251 chr2 27282286 27282286 1 + G T SARC 27282283 + 27282263 27282303 41 CCCGTCAGAGGTAAGCCAGTCTGGGAGCCCCTGCAACATGT CCCGTCAGAGGTAAGCCAGTCTGTGAGCCCCTGCAACATGT < 41bp 0.723024319193417 0.333331618749431 0.22996467 0.021863371 prediction 0.446048638386834 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282283 chr2:27282286 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_79754 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:27282273-27282302
64251 chr2 27282285 27282285 1 + G T STAD 27282283 + 27282263 27282303 41 CCCGTCAGAGGTAAGCCAGTCTGGGAGCCCCTGCAACATGT CCCGTCAGAGGTAAGCCAGTCTTGGAGCCCCTGCAACATGT < 41bp 0.723024319193417 0.374865616348067 0.22996467 0.04204142 prediction 0.446048638386834 Functional Loss - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282283 chr2:27282285 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_79755 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:27282273-27282302
64251 chr9 139804381 139804381 1 + G A COAD 139804378 + 139804358 139804398 41 CCCTTCTTTTGAAGGCGCACCACGAGGTCTGCCCCAAGTTC CCCTTCTTTTGAAGGCGCACCACAAGGTCTGCCCCAAGTTC < 41bp 0.723022746876373 0.468537209967217 0.17237097 0.10462627 prediction 0.446045493752746 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139804378 chr9:139804381 nonsynonymous SNV 0.726 1 24 hm5C_associated_SNPs_79756 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:139804369-139804428
64251 chr9 139804380 139804380 1 + C T UCEC 139804378 + 139804358 139804398 41 CCCTTCTTTTGAAGGCGCACCACGAGGTCTGCCCCAAGTTC CCCTTCTTTTGAAGGCGCACCATGAGGTCTGCCCCAAGTTC < 41bp 0.723022746876373 0.450629895746794 0.17237097 0.15425521 prediction 0.446045493752746 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139804378 chr9:139804380 synonymous SNV . 0 23 hm5C_associated_SNPs_79757 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:139804369-139804428
64251 chr2 25016218 25016218 1 - C G LUAD 25016219 - 25016199 25016239 41 GGGGAGTAGGTCCGGCCTTTCGGGTGGTCAGGAAGATGGCG GGGGAGTAGGTCCGGCCTTTCCGGTGGTCAGGAAGATGGCG < 41bp 0.869115563673721 0.64609585432189 0.9332398 0.902086 prediction 0.446039418703662 Functional Loss - PTRHD1 ENSG00000184924 CDS Human protein_coding chr2:25016219 chr2:25016218 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_79758 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:25016217-25016218
64251 chr3 12545142 12545142 1 + C T KIRC 12545140 + 12545120 12545160 41 GCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCAT GCAAACAAGATGCTCTCATCCTTCAGCGTGGCCTTCATCAT < 41bp 0.856679369107894 0.63366106384609 0.91312927 0.07820782 prediction 0.446036610523607 Functional Loss - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12545140 chr3:12545142 synonymous SNV . 0 23 hm5C_associated_SNPs_79760 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:12545140-12545160
64251 chr1 64114205 64114205 1 + G A BLCA 64114202 + 64114182 64114222 41 CTCCAGGTTCTGACCACATCCGTGAGAAAGATGGACTGTGG CTCCAGGTTCTGACCACATCCGTAAGAAAGATGGACTGTGG < 41bp 0.762495764181557 0.539483139670664 0.26779056 0.2162331 prediction 0.446025249021786 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64114202 chr1:64114205 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_79765 0 0 2 DGCR8 POSTAR2 GSE39086,GSM955512 chr1:64114200-64114220
64251 chr11 118277757 118277757 1 + T C LIHC 118277756 + 118277736 118277776 41 TCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTCAATAGT TCCCTAGAGCTATTCAGAGCCCGAAAAAAATAGTCAATAGT < 41bp 0.723009780365895 0.474253177885687 0.09516126 0.1776267 prediction 0.44601956073179 Functional Loss - ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277756 chr11:118277757 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_79767 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:118277696-118277760
64251 chr14 100610071 100610071 1 + C T UCEC 100610069 + 100610049 100610089 41 GAGCTGAGTGGGATCAGCACCACGTAAGGGGCCGGCCTCGC GAGCTGAGTGGGATCAGCACCATGTAAGGGGCCGGCCTCGC < 41bp 0.72300414412354 0.478693470121271 0.38020107 0.25927716 prediction 0.44600828824708 Functional Loss - EVL ENSG00000196405 CDS Human protein_coding chr14:100610069 chr14:100610071 nonsynonymous SNV 0.840 2 23 hm5C_associated_SNPs_79770 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:100610063-100610096
64251 chr10 12163557 12163557 1 + A C rs559592095 12163556 + 12163536 12163576 41 ATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGTCAACGT ATCACCTGAGGTCAGGAGTTCCAGACCAGCCTGGTCAACGT < 41bp 0.723003729665325 0.47798757185782 0.5235824 0.27392006 prediction 0.44600745933065 Functional Loss - DHTKD1 ENSG00000181192 UTR3 Human protein_coding chr10:12163556 chr10:12163557 . . 0 22 hm5C_associated_SNPs_79771 0 0 4 U2AF2 POSTAR2 GSE83923,CSM2221660 chr10:12163540-12163560
64251 chr11 3062129 3062129 1 - G A UCEC 3062131 - 3062111 3062151 41 GACGCATCTCACATGGGGCACGCCAGGTAGGTCCACCGCGG GACGCATCTCACATGGGGCACGTCAGGTAGGTCCACCGCGG < 41bp 0.832674309430031 0.609674267683803 0.0989199 0.185754 prediction 0.446000083492457 Functional Loss - CARS ENSG00000110619 CDS Human protein_coding chr11:3062131 chr11:3062129 nonsynonymous SNV 0.965 4 23 hm5C_associated_SNPs_79773 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:3062129-3062156
64251 chr12 123341225 123341225 1 + G A LUSC 123341222 + 123341202 123341242 41 CTCAAGAGGGAGCTGGAGGCCAAGGCCGGAGAGCTGGCCCG CTCAAGAGGGAGCTGGAGGCCAAAGCCGGAGAGCTGGCCCG < 41bp 0.790797832681574 0.56779873913625 0.8889427 0.8693168 prediction 0.445998187090648 Functional Loss - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123341222 chr12:123341225 synonymous SNV . 0 24 hm5C_associated_SNPs_79774 0 0 8 BUD13 POSTAR2 ENCODE chr12:123341168-123341266
64251 chr1 161132100 161132100 1 + G A UCEC 161132097 + 161132077 161132117 41 GCTGCAGTGTCTGAGCAGCACTCGACCTCTTCGGGACTTCT GCTGCAGTGTCTGAGCAGCACTCAACCTCTTCGGGACTTCT < 41bp 0.786183291937341 0.563186385789586 0.39950478 0.32641652 prediction 0.44599381229551 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132097 chr1:161132100 nonsynonymous SNV 0.969 0 24 hm5C_associated_SNPs_79776 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:161132089-161132118
64251 chr18 9396292 9396292 1 + C T UCEC 9396290 + 9396270 9396310 41 CAACCCAGGTATGTGTAATCCTCGAAATTATAGTGACACAC CAACCCAGGTATGTGTAATCCTTGAAATTATAGTGACACAC < 41bp 0.863734572222271 0.64074213529768 0.32301414 0.024159968 prediction 0.445984873849182 Functional Loss - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9396290 chr18:9396292 stopgain 1.000 1 23 hm5C_associated_SNPs_79779 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr18:9396278-9396297
64251 chr4 76472354 76472354 1 + G C rs17214073 76472350 + 76472330 76472370 41 GGTGCGTCAACATGCAGGTACAGGGGCAGACCCTTCTCCCT GGTGCGTCAACATGCAGGTACAGGCGCAGACCCTTCTCCCT < 41bp 0.72298846135943 0.459471369823801 0.916746 0.42112032 prediction 0.44597692271886 Functional Loss - THAP6;C4orf26 ENSG00000174796 intronic Human protein_coding chr4:76472350 chr4:76472354 . . 0 25 hm5C_associated_SNPs_79780 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr4:76472354-76472355
64251 chr6 76602272 76602272 1 + G C KIRP 76602271 + 76602251 76602291 41 AAGTGGAGGCACAGCTGGCCCGACAGAAGGAGGAGGAATCC AAGTGGAGGCACAGCTGGCCCCACAGAAGGAGGAGGAATCC < 41bp 0.72298706928501 0.412687376065715 0.36381245 0.1828261 prediction 0.44597413857002 Functional Loss - MYO6 ENSG00000196586 CDS Human protein_coding chr6:76602271 chr6:76602272 nonsynonymous SNV 0.892 3 22 hm5C_associated_SNPs_79781 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:76602271-76602272
64251 chr11 65048560 65048560 1 + G A SKCM 65048557 + 65048537 65048577 41 GGGAGACCGGGAACATTCCTCGGGTGCTCAAATTCCAGTGG GGGAGACCGGGAACATTCCTCGGATGCTCAAATTCCAGTGG < 41bp 0.79912609012319 0.576149003942061 0.90279603 0.89050996 prediction 0.445954172362256 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048557 chr11:65048560 nonsynonymous SNV 0.711 4 24 hm5C_associated_SNPs_79787 0 0 2 GRWD1 POSTAR2 ENCODE chr11:65048522-65048597
64251 chr12 133299055 133299055 1 + C T rs187692595 133299053 + 133299033 133299073 41 ACCGTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCGTGA ACCGTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGA < 41bp 0.722973276253233 0.481476359499674 0.88361174 0.1908674 prediction 0.445946552506465 Functional Loss - PGAM5 ENSG00000247077 UTR3 Human protein_coding chr12:133299053 chr12:133299055 . . 0 23 hm5C_associated_SNPs_79790 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:133299030-133299095
64251 chr12 56487891 56487891 1 + G C BLCA 56487890 + 56487870 56487910 41 TTCCCCACTACAGGGAGCCTCGAGAATTTGCCCATGAGGCC TTCCCCACTACAGGGAGCCTCCAGAATTTGCCCATGAGGCC < 41bp 0.722967967939955 0.40111040918774 0.30276188 0.23637354 prediction 0.44593593587991 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56487890 chr12:56487891 nonsynonymous SNV 0.982 2 22 hm5C_associated_SNPs_79792 0 0 2 BUD13 POSTAR2 ENCODE chr12:56487852-56487964
64251 chr12 56487893 56487893 1 + G T UCEC 56487890 + 56487870 56487910 41 TTCCCCACTACAGGGAGCCTCGAGAATTTGCCCATGAGGCC TTCCCCACTACAGGGAGCCTCGATAATTTGCCCATGAGGCC < 41bp 0.722967967939955 0.332334856888977 0.30276188 0.12261438 prediction 0.44593593587991 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56487890 chr12:56487893 stopgain 0.984 1 24 hm5C_associated_SNPs_79793 0 0 3 BUD13 POSTAR2 ENCODE chr12:56487852-56487964
64251 chr2 187455095 187455095 1 + C T SKCM 187455093 + 187455073 187455113 41 TTCCGCCGCGGCGACGGCTGCGCCTCGGTCCCCGCGGCCTC TTCCGCCGCGGCGACGGCTGCGTCTCGGTCCCCGCGGCCTC < 41bp 0.722967270661481 0.494957982151263 0.312107 0.23846197 prediction 0.445934541322963 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187455093 chr2:187455095 synonymous SNV . 0 23 hm5C_associated_SNPs_79795 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585673 chr2:187455069-187455099
64251 chr1 160340755 160340755 1 + G A STAD 160340752 + 160340732 160340772 41 CGCGCCACAGCCAAGTACCGCACGGCCCACGCCACGCGAGA CGCGCCACAGCCAAGTACCGCACAGCCCACGCCACGCGAGA < 41bp 0.79709740306486 0.574134805822723 0.27000725 0.063987166 prediction 0.445925194484273 Functional Loss - NHLH1 ENSG00000171786 CDS Human protein_coding chr1:160340752 chr1:160340755 synonymous SNV . 0 24 hm5C_associated_SNPs_79800 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:160340743-160340774
64251 chr11 67050012 67050012 1 + G A COAD 67050009 + 67049989 67050029 41 GCATGCTCTTCAAGTTGCTGCGGGGGTGAGTGGCCCATCCC GCATGCTCTTCAAGTTGCTGCGGAGGTGAGTGGCCCATCCC < 41bp 0.802176676861754 0.579214452425735 0.9193592 0.9068352 prediction 0.445924448872037 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67050009 chr11:67050012 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79801 0 0 3 GRWD1 POSTAR2 ENCODE chr11:67049986-67050013
64251 chr14 69908952 69908952 1 + G A LUAD 69908949 + 69908929 69908969 41 GTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGT GTTTTCATGTTGCTGGTGGACCAAATTGGTAACTCCCATGT < 41bp 0.761743802362456 0.538784657697051 0.31870258 0.22994077 prediction 0.44591828933081 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69908949 chr14:69908952 synonymous SNV . 0 24 hm5C_associated_SNPs_79804 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr14:69908900-69908956
64251 chr20 61430980 61430980 1 + G A UCEC 61430977 + 61430957 61430997 41 CCTTCCAGTCCCAGTGCTGCCAAGCGGCGCCGCACGTAGAC CCTTCCAGTCCCAGTGCTGCCAAACGGCGCCGCACGTAGAC < 41bp 0.766425865794208 0.543467336256245 0.6512099 0.91283435 prediction 0.445917059075927 Functional Loss - MRGBP ENSG00000101189 CDS Human protein_coding chr20:61430977 chr20:61430980 synonymous SNV . 0 24 hm5C_associated_SNPs_79805 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61430980-61431000
64251 chr17 1673322 1673322 1 + G A UCEC 1673319 + 1673299 1673339 41 CTGTCTCCTCTCAGTGTGGCCACGGCCCTCTCGGCCCTCTC CTGTCTCCTCTCAGTGTGGCCACAGCCCTCTCGGCCCTCTC < 41bp 0.799042027110966 0.576091169706592 0.48139235 0.52723885 prediction 0.445901714808748 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1673319 chr17:1673322 synonymous SNV . 0 24 hm5C_associated_SNPs_79810 0 0 8 RPS3 POSTAR2 ENCODE chr17:1673311-1673344
64251 chr21 47533969 47533969 1 + G T STAD 47533966 + 47533946 47533986 41 ATCCCTGGGCCCTCTGGCCCCAAGGGCTACCGTGGACAGAA ATCCCTGGGCCCTCTGGCCCCAATGGCTACCGTGGACAGAA < 41bp 0.722950393563931 0.318568167310043 0.87134135 0.06333515 prediction 0.445900787127862 Functional Loss - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47533966 chr21:47533969 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_79811 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47533966-47533997
64251 chr18 33725995 33725995 1 + G T UCEC 33725992 + 33725972 33726012 41 CTGGGCTCCAGATGAAGAGTCAGGAGTTTGGCTAGAACAGG CTGGGCTCCAGATGAAGAGTCAGTAGTTTGGCTAGAACAGG < 41bp 0.73961317262836 0.516666728210154 0.91370225 0.32204384 prediction 0.445892888836412 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33725992 chr18:33725995 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_79814 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:33725951-33726004
64251 chr2 61009111 61009111 1 + G A UCEC 61009108 + 61009088 61009128 41 GTATAATGTGTCCACATCAACTCGAACAGTAATGGTAGAAG GTATAATGTGTCCACATCAACTCAAACAGTAATGGTAGAAG < 41bp 0.750196172174411 0.527255306397836 0.41976476 0.12704328 prediction 0.44588173155315 Functional Loss - PAPOLG ENSG00000115421 CDS Human protein_coding chr2:61009108 chr2:61009111 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_79818 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:61009093-61009131
64251 chr19 33585142 33585142 1 + C T CESC 33585140 + 33585120 33585160 41 AGAAGGACAAGGAGTTGGTCCTCGAGTAAAGAGACGGCCAC AGAAGGACAAGGAGTTGGTCCTTGAGTAAAGAGACGGCCAC < 41bp 0.868332875579363 0.645392277100722 0.14828059 0.024787813 prediction 0.445881196957282 Functional Loss - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33585140 chr19:33585142 stopgain 1.000 1 23 hm5C_associated_SNPs_79819 0 0 1 DDX24 POSTAR2 ENCODE chr19:33585108-33585161
64251 chr5 176074643 176074643 1 + G A rs74793226 176074640 + 176074620 176074660 41 CCCGGCAAGCACCAGCATTTCCAGGAACCTGAGGTCGGCTG CCCGGCAAGCACCAGCATTTCCAAGAACCTGAGGTCGGCTG < 41bp 0.761884741032284 0.538946354130543 0.8295909 0.4692361 prediction 0.445876773803483 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176074640 chr5:176074643 synonymous SNV . 0 24 hm5C_associated_SNPs_79820 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr5:176074610-176074644
64251 chr1 155106855 155106855 1 + C T rs181155559 155106853 + 155106833 155106873 41 GCAGGCATGGTCCCTTAAGGCACAGTGGGAGCTGAGCTGGA GCAGGCATGGTCCCTTAAGGCATAGTGGGAGCTGAGCTGGA < 41bp 0.756011217867586 0.533073854685819 0.400872 0.43048632 prediction 0.445874726363533 Functional Loss - EFNA1 ENSG00000169242 UTR3 Human protein_coding chr1:155106853 chr1:155106855 . . 0 23 hm5C_associated_SNPs_79821 0 0 2 DDX55 POSTAR2 ENCODE chr1:155106810-155106869
64251 chr7 100865924 100865924 1 + G T LUSC 100865922 + 100865902 100865942 41 GGGCAGCGGCGGGTGCTGGACCGGGCTGCCCGGCAGCGTCG GGGCAGCGGCGGGTGCTGGACCTGGCTGCCCGGCAGCGTCG < 41bp 0.908379486026734 0.685450763400744 0.9071787 0.37826246 prediction 0.445857445251981 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100865922 chr7:100865924 nonsynonymous SNV 0.651 1 23 hm5C_associated_SNPs_79822 0 0 8 RTCB POSTAR2 GSE38201,GSM936508 chr7:100865910-100865939
64251 chr11 61563332 61563332 1 + G A UCEC 61563329 + 61563309 61563349 41 CAGAGGCCAGCTGTGCTGCCCTGGTGAAGGCTGGCAAAGTC CAGAGGCCAGCTGTGCTGCCCTGATGAAGGCTGGCAAAGTC < 41bp 0.775923585013021 0.55299709647373 0.35239184 0.13783443 prediction 0.445852977078583 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563329 chr11:61563332 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_79824 0 0 7 FMR1 POSTAR2 ENCODE chr11:61563285-61563332
64251 chr6 74183277 74183277 1 + G A COAD 74183274 + 74183254 74183294 41 GTTGAAGACTGGGACTCCACCCCGAATTGCCAAAGAGTCCA GTTGAAGACTGGGACTCCACCCCAAATTGCCAAAGAGTCCA < 41bp 0.73798218101015 0.515057130544315 0.011374354 0.06095496 prediction 0.445850100931669 Functional Loss - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74183274 chr6:74183277 nonsynonymous SNV 0.987 4 24 hm5C_associated_SNPs_79825 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:74183260-74183290
64251 chr7 107398714 107398714 1 + C T UCEC 107398712 + 107398692 107398732 41 TACAGGCTCATATCAACCATCGCCATATGAGAGCTGGAAAA TACAGGCTCATATCAACCATCGTCATATGAGAGCTGGAAAA < 41bp 0.722924209402999 0.434249155243463 0.93056715 0.87689114 prediction 0.445848418805999 Functional Loss - CBLL1 ENSG00000105879 CDS Human protein_coding chr7:107398712 chr7:107398714 synonymous SNV . 0 23 hm5C_associated_SNPs_79826 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:107398688-107398716
64251 chr4 151504297 151504297 1 + C T COAD 151504295 + 151504275 151504315 41 CGAGAGGTCTGTAAGGTGGTCTCGGACGTGCTCAAGGAAGT CGAGAGGTCTGTAAGGTGGTCTTGGACGTGCTCAAGGAAGT < 41bp 0.722920026490141 0.468117864464182 0.38386223 0.2856698 prediction 0.445840052980283 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504295 chr4:151504297 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_79830 0 0 6 EIF3G POSTAR2 GSE65004,GSM1585674 chr4:151504276-151504311
64251 chr19 35660546 35660546 1 + T C rs1046294 35660545 + 35660525 35660565 41 CAGAAACAGGAGCTGACAACCTGCTGGGCACCCGAAGACCA CAGAAACAGGAGCTGACAACCCGCTGGGCACCCGAAGACCA < 41bp 0.751267281048219 0.528349412635203 0.28384623 0.3497327 prediction 0.445835736826032 Functional Loss - FXYD5 ENSG00000089327 UTR3 Human protein_coding chr19:35660545 chr19:35660546 . . 0 22 hm5C_associated_SNPs_79833 0 0 10 UPF1 POSTAR2 GSE69586,GSM1704216 chr19:35660520-35660560
64251 chr11 65048534 65048534 1 + C T GBM 65048532 + 65048512 65048552 41 TGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGAACAT TGAACAACAAGTCAGTGATTCTTGAGGGAGACCGGGAACAT < 41bp 0.875977244567084 0.653061585861146 0.15726724 0.14922917 prediction 0.445831317411875 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048532 chr11:65048534 synonymous SNV . 0 23 hm5C_associated_SNPs_79838 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65048532-65048555
64251 chr4 186263216 186263216 1 + G A LGG 186263213 + 186263193 186263233 41 GGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCT GGAGGAGTTGAAACTAAGAACTGAACGGTCCCCAGAAGGCT < 41bp 0.773631514707895 0.55071769005879 0.20011681 0.293627 prediction 0.445827649298211 Functional Loss - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186263213 chr4:186263216 stopgain 0.998 1 24 hm5C_associated_SNPs_79839 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr4:186263200-186263220
64251 chr19 44739593 44739593 1 + C T COAD 44739591 + 44739571 44739611 41 GGCAAGGGATTCAGTAGCAGCACGGGTCTTATCATTCATTA GGCAAGGGATTCAGTAGCAGCATGGGTCTTATCATTCATTA < 41bp 0.80239349516231 0.579479906355934 0.056176424 0.04148519 prediction 0.445827177612751 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739591 chr19:44739593 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_79840 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44739535-44739600
64251 chr1 110882129 110882129 1 + C T HNSC 110882127 + 110882107 110882147 41 CGGGGCGGCGGGTTACTCAGCTCCGCGGAGACGACCTCCGA CGGGGCGGCGGGTTACTCAGCTTCGCGGAGACGACCTCCGA < 41bp 0.783252285811159 0.560344549584343 0.17070979 0.10895407 prediction 0.445815472453631 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882127 chr1:110882129 synonymous SNV . 0 23 hm5C_associated_SNPs_79844 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:110882100-110882140
64251 chr19 36033430 36033430 1 - C T rs150278933 36033433 - 36033413 36033453 41 ATTGGTGCATCCGGTGAGGGCGCGGAGATGACCACACGTTG ATTGGTGCATCCGGTGAGGGCGCAGAGATGACCACACGTTG < 41bp 0.792295941753834 0.569388530542717 0.8167181 0.6783087 prediction 0.445814822422234 Functional Loss - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36033433 chr19:36033430 synonymous SNV . 0 24 hm5C_associated_SNPs_79845 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36033403-36033445
64251 chr2 32289009 32289009 1 + G C HNSC 32289008 + 32288988 32289028 41 GCCCCCGCCCCTCCCGCCGCCGGGCCGGCCCCTCCGCCCGA GCCCCCGCCCCTCCCGCCGCCCGGCCGGCCCCTCCGCCCGA < 41bp 0.881182667202613 0.658278980035751 0.85891974 0.13519809 prediction 0.445807374333724 Functional Loss - SPAST ENSG00000021574 CDS Human protein_coding chr2:32289008 chr2:32289009 nonsynonymous SNV 0.083 1 22 hm5C_associated_SNPs_79848 0 0 4 BUD13 POSTAR2 ENCODE chr2:32288990-32289038
64251 chr11 844154 844154 1 + G T rs55885142 844152 + 844132 844172 41 CGGTGGCCTGGGGTCAGAGCCAGGTTCAGCTGCGAGGCTGC CGGTGGCCTGGGGTCAGAGCCATGTTCAGCTGCGAGGCTGC < 41bp 0.722900119599555 0.376459391351385 0.8361261 0.10707623 prediction 0.445800239199111 Functional Loss - TSPAN4 ENSG00000214063 UTR5 Human protein_coding chr11:844152 chr11:844154 . . 0 23 hm5C_associated_SNPs_79851 0 0 1 PPIG POSTAR2 ENCODE chr11:844145-844182
64251 chr10 12206359 12206359 1 + G A SKCM 12206356 + 12206336 12206376 41 GGGGGCCATTGGATCTGGCACTGGAATTCTGCTAGCAGTCA GGGGGCCATTGGATCTGGCACTGAAATTCTGCTAGCAGTCA < 41bp 0.7605414187348 0.537648878649472 0.46573102 0.3436795 prediction 0.445785080170657 Functional Loss - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12206356 chr10:12206359 nonsynonymous SNV 0.517 4 24 hm5C_associated_SNPs_79854 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:12206340-12206360
64251 chr14 24035356 24035356 1 + G T LUAD 24035354 + 24035334 24035374 41 GACCTTCCGGATCATGTGCACTGCAGTCAGAATAGCCTGCA GACCTTCCGGATCATGTGCACTTCAGTCAGAATAGCCTGCA < 41bp 0.722890732377999 0.385552606812812 0.23679864 0.083857 prediction 0.445781464755997 Functional Loss - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24035354 chr14:24035356 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_79857 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:24035314-24035361
64251 chr12 14976453 14976453 1 + T C rs202161739 14976452 + 14976432 14976472 41 TGAAAAAACTGCAGGATGTACTAAAAACTGAGGATTCCAAA TGAAAAAACTGCAGGATGTACCAAAAACTGAGGATTCCAAA < 41bp 0.753097097504975 0.530207341818668 0.051326722 0.05920151 prediction 0.445779511372613 Functional Loss - C12orf60 ENSG00000182993 CDS Human protein_coding chr12:14976452 chr12:14976453 nonsynonymous SNV 0.045 1 22 hm5C_associated_SNPs_79858 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:14976433-14976483
64251 chr19 34856594 34856594 1 + A C rs565281844 34856593 + 34856573 34856613 41 TGCAGCTCTGGCCATTTGAGCAGGGGCTCCTTTCGCAGTTG TGCAGCTCTGGCCATTTGAGCCGGGGCTCCTTTCGCAGTTG < 41bp 0.722886363661961 0.464221941741563 0.94277704 0.91613746 prediction 0.445772727323921 Functional Loss - GPI ENSG00000105220 intronic Human protein_coding chr19:34856593 chr19:34856594 . . 0 22 hm5C_associated_SNPs_79859 0 0 1 PRPF8 POSTAR2 ENCODE chr19:34856577-34856632
64251 chr17 79985969 79985969 1 + G A SKCM 79985966 + 79985946 79985986 41 AGCTCCTGGCCACAGCGGAGCAGGAGCAGCTGAGCCTGTCA AGCTCCTGGCCACAGCGGAGCAGAAGCAGCTGAGCCTGTCA < 41bp 0.803864872687148 0.58097905502104 0.89681023 0.8634883 prediction 0.445771635332217 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79985966 chr17:79985969 nonsynonymous SNV 0.210 1 24 hm5C_associated_SNPs_79860 0 0 1 SRSF1 POSTAR2 ENCODE chr17:79985935-79986016
64251 chr3 25635088 25635088 1 + G T HNSC 25635085 + 25635065 25635105 41 TCGAACTCAGATGCACAATGCTGGATTTGGTCCTCTGACTG TCGAACTCAGATGCACAATGCTGTATTTGGTCCTCTGACTG < 41bp 0.722878568754395 0.373156680265098 0.41137284 0.2161006 prediction 0.44575713750879 Functional Loss - RARB ENSG00000077092 CDS Human protein_coding chr3:25635085 chr3:25635088 nonsynonymous SNV 0.988 5 24 hm5C_associated_SNPs_79864 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:25635061-25635099
64251 chr11 123994389 123994389 1 + C T UCEC 123994386 + 123994366 123994406 41 GGGAGAGTGTGAAGTACACTCAGCAAACAATGGAGGAGGCT GGGAGAGTGTGAAGTACACTCAGTAAACAATGGAGGAGGCT < 41bp 0.722875552875843 0.497597837819468 0.67561007 0.6338945 prediction 0.445751105751686 Functional Loss - VWA5A ENSG00000110002 CDS Human protein_coding chr11:123994386 chr11:123994389 stopgain 0.154 0 24 hm5C_associated_SNPs_79865 0 0 1 ZNF622 POSTAR2 ENCODE chr11:123994364-123994443
64251 chr3 9986618 9986618 1 + A C rs114661849 9986614 + 9986594 9986634 41 TCACAGCTCCCTCCTGCCAGCTGCATGCTGCCAGTTCCTGT TCACAGCTCCCTCCTGCCAGCTGCCTGCTGCCAGTTCCTGT < 41bp 0.722874818452138 0.331138727205491 0.14723009 0.11806345 prediction 0.445749636904275 Functional Loss - CRELD1 ENSG00000163703 UTR3 Human protein_coding chr3:9986614 chr3:9986618 . . 0 25 hm5C_associated_SNPs_79866 0 0 1 PCBP2 POSTAR2 ENCODE chr3:9986596-9986672
64251 chr5 162896811 162896811 1 + G T LUAD 162896808 + 162896788 162896828 41 AAACAACTTATTGAATTGACCAGGACTAATGAACTACTAAA AAACAACTTATTGAATTGACCAGTACTAATGAACTACTAAA < 41bp 0.722870191868466 0.354124286914995 0.09090987 0.0571599 prediction 0.445740383736933 Functional Loss - HMMR ENSG00000072571 CDS Human protein_coding chr5:162896808 chr5:162896811 nonsynonymous SNV 0.280 3 24 hm5C_associated_SNPs_79870 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:162896796-162896822
64251 chrX 149839986 149839986 1 + C T UCEC 149839984 + 149839964 149840004 41 CGGCTTGAGGAACTGCAGCTCGCCAACTCTGCCAAGCTTTC CGGCTTGAGGAACTGCAGCTCGTCAACTCTGCCAAGCTTTC < 41bp 0.722869537485737 0.442379212241365 0.14918375 0.069722265 prediction 0.445739074971475 Functional Loss - MTM1 ENSG00000171100 CDS Human protein_coding chrX:149839984 chrX:149839986 nonsynonymous SNV 0.929 1 23 hm5C_associated_SNPs_79871 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chrX:149839973-149839994
64251 chr8 28588787 28588787 1 + G A GBM 28588784 + 28588764 28588804 41 TTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGA TTGAACAACCGATTCTTACCCTGAAATGAAATTGAGACAGA < 41bp 0.739572871873473 0.516706938812196 0.21842983 0.089205 prediction 0.445731866122555 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28588784 chr8:28588787 stopgain 1.000 1 24 hm5C_associated_SNPs_79874 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr8:28588766-28588793
64251 chr5 53815125 53815125 1 + C T ACC 53815123 + 53815103 53815143 41 AGCGCGCTGCAGCTCAACCACACGGCCAACGAGTTCGCGCG AGCGCGCTGCAGCTCAACCACATGGCCAACGAGTTCGCGCG < 41bp 0.722854355109344 0.466606615047037 0.13177902 0.34950274 prediction 0.445708710218687 Functional Loss - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53815123 chr5:53815125 nonsynonymous SNV 0.892 4 23 hm5C_associated_SNPs_79878 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr5:53815100-53815126
64251 chr19 58817484 58817484 1 + G A rs111549114 58817481 + 58817461 58817501 41 CGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGG CGTGACAAGTGGTGCCCGACCAGAGACCTGAACGAGGAAGG < 41bp 0.746433034043778 0.523586641249356 0.880625 0.4475184 prediction 0.445692785588844 Functional Loss - ERVK3-1;ZNF8-ERVK3-1 ENSG00000142396 ncRNA_exonic Human protein_coding chr19:58817481 chr19:58817484 . . 0 24 hm5C_associated_SNPs_79881 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:58817460-58817500
64251 chr7 73753320 73753320 1 + G T LUAD 73753317 + 73753297 73753337 41 GGGGCGAAAAGGACCTGCGCCTGGGGGACCGCGTGCTGGTG GGGGCGAAAAGGACCTGCGCCTGTGGGACCGCGTGCTGGTG < 41bp 0.722839443080265 0.324053978475082 0.82429737 0.18252707 prediction 0.445678886160529 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73753317 chr7:73753320 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_79886 0 0 5 BUD13 POSTAR2 ENCODE chr7:73753313-73753338
64251 chr19 35660493 35660493 1 + G T LUAD 35660490 + 35660470 35660510 41 TGGCAAGTGCAGGCAGCTGTCCCGGTTATGCCGGAATCGTT TGGCAAGTGCAGGCAGCTGTCCCTGTTATGCCGGAATCGTT < 41bp 0.72283705467451 0.331389986100252 0.87482524 0.2414785 prediction 0.44567410934902 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35660490 chr19:35660493 nonsynonymous SNV 0.024 1 24 hm5C_associated_SNPs_79887 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:35660472-35660499
64251 chr19 49379046 49379046 1 + G A PAAD 49379043 + 49379023 49379063 41 CCTCACCCCTGCTGCCCGGGCCAGAGCCTGGGCACGCCTCA CCTCACCCCTGCTGCCCGGGCCAAAGCCTGGGCACGCCTCA < 41bp 0.722831941087204 0.47975526003458 0.19393748 0.02587068 prediction 0.445663882174409 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49379043 chr19:49379046 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_79888 0 0 1 DDX55 POSTAR2 ENCODE chr19:49379004-49379063
64251 chr5 68809847 68809847 1 + C T SKCM 68809845 + 68809825 68809865 41 AATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGGACAGGT AATTTTCTTTGCTGTGAAAACTTGAAGAAAGATGGACAGGT < 41bp 0.722822053909048 0.419812702493598 0.30694544 0.11482531 prediction 0.445644107818095 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68809845 chr5:68809847 stopgain 0.999 1 23 hm5C_associated_SNPs_79894 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:68809787-68809867
64251 chr12 53690479 53690479 1 + G A rs111475800 53690476 + 53690456 53690496 41 TGCTAGGATTACATTACAGGCGTGAGCCACTGCCCCCGGCC TGCTAGGATTACATTACAGGCGTAAGCCACTGCCCCCGGCC < 41bp 0.722814959339212 0.485744815972135 0.46463338 0.32139158 prediction 0.445629918678425 Functional Loss - PFDN5 ENSG00000123349 intronic Human protein_coding chr12:53690476 chr12:53690479 . . 0 24 hm5C_associated_SNPs_79896 0 0 3 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:53690460-53690480
64251 chr2 202337730 202337730 1 + A C rs1019299 202337729 + 202337709 202337749 41 TCTTGCACGGCATACTCCCACAGGAACACTGGTAACTATAA TCTTGCACGGCATACTCCCACCGGAACACTGGTAACTATAA < 41bp 0.813769544453046 0.590955153023843 0.536053 0.16873223 prediction 0.445628782858406 Functional Loss - STRADB ENSG00000082146 CDS Human protein_coding chr2:202337729 chr2:202337730 synonymous SNV . 0 22 hm5C_associated_SNPs_79897 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:202337714-202337750
64251 chr19 2813234 2813234 1 + T C UCEC 2813233 + 2813213 2813253 41 CCTTCCTCCTGAGCAAGGGGCTGCAGGTCGGGGGCTGCGAG CCTTCCTCCTGAGCAAGGGGCCGCAGGTCGGGGGCTGCGAG < 41bp 0.775316414490369 0.552507761406495 0.7226712 0.7766886 prediction 0.445617306167748 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2813233 chr19:2813234 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_79901 0 0 4 SSB POSTAR2 GSE95683,GSM2521600 chr19:2813211-2813234
64251 chr4 78079786 78079786 1 + G T BLCA 78079783 + 78079763 78079803 41 ACAAGAAGAGAGATTCCAACCTCGAGAAAAAGGGCTGAGTT ACAAGAAGAGAGATTCCAACCTCTAGAAAAAGGGCTGAGTT < 41bp 0.919380448988676 0.696573171172851 0.58815014 0.78970957 prediction 0.44561455563165 Functional Loss - CCNG2 ENSG00000138764 CDS Human protein_coding chr4:78079783 chr4:78079786 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_79903 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:78079765-78079789
64251 chr12 31254037 31254037 1 + G A UCEC 31254034 + 31254014 31254054 41 TCCAACCAGCCGCTGGAATTCACGTTCCAGAAAAGAGAGCT TCCAACCAGCCGCTGGAATTCACATTCCAGAAAAGAGAGCT < 41bp 0.735069897937147 0.512269581850827 0.29444593 0.27412617 prediction 0.445600632172639 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31254034 chr12:31254037 synonymous SNV . 0 24 hm5C_associated_SNPs_79909 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:31254010-31254043
64251 chr6 155123231 155123231 1 + G T LUAD 155123229 + 155123209 155123249 41 GGCACAACTTACAGCTGCAGCTGCAGCTGCCAACACTCTTA GGCACAACTTACAGCTGCAGCTTCAGCTGCCAACACTCTTA < 41bp 0.722799116003592 0.390999623350717 0.18429625 0.059178203 prediction 0.445598232007185 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155123229 chr6:155123231 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_79910 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:155123201-155123234
64251 chr18 72183552 72183552 1 + G A HNSC 72183549 + 72183529 72183569 41 TCTGGGTCTGGGGCCAAGACCGTGATTCCCAGGAAGGTGGT TCTGGGTCTGGGGCCAAGACCGTAATTCCCAGGAAGGTGGT < 41bp 0.795927847623421 0.57313109753335 0.27579734 0.2488502 prediction 0.445593500180141 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72183549 chr18:72183552 synonymous SNV . 0 24 hm5C_associated_SNPs_79911 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:72183536-72183567
64251 chr2 219445452 219445452 1 + G T SARC 219445450 + 219445430 219445470 41 GCATTCATTTGGTACTATTGCAGCACTTTTACAGGTGGGTT GCATTCATTTGGTACTATTGCATCACTTTTACAGGTGGGTT < 41bp 0.722777712977417 0.380416810476858 0.5260127 0.34984934 prediction 0.445555425954835 Functional Loss - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219445450 chr2:219445452 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_79926 0 0 8 DDX3X POSTAR2 ENCODE chr2:219445388-219445460
64251 chr10 99330534 99330534 1 + G A rs576975931 99330531 + 99330511 99330551 41 GGCCCTCACCCTGCCTGTCTCCCGAAGCAGGTTCGAGCCAC GGCCCTCACCCTGCCTGTCTCCCAAAGCAGGTTCGAGCCAC < 41bp 0.776480788147824 0.553704626929896 0.52492964 0.273269 prediction 0.445552322435857 Functional Loss - UBTD1 ENSG00000165886 UTR3 Human protein_coding chr10:99330531 chr10:99330534 . . 0 24 hm5C_associated_SNPs_79927 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:99330517-99330551
64251 chr14 20825585 20825585 1 + G A BLCA 20825582 + 20825562 20825602 41 TAGGTCAGTGTAATGAACTACTAGAGGCCAATCCTAAGGCC TAGGTCAGTGTAATGAACTACTAAAGGCCAATCCTAAGGCC < 41bp 0.722771844090316 0.495467903911024 0.31099018 0.27251205 prediction 0.445543688180633 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20825582 chr14:20825585 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_79928 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:20825556-20825588
64251 chr3 11598601 11598601 1 + G T rs114200578 11598599 + 11598579 11598619 41 AGGTGGGACACAGCACACCCCAGGGGGAGGGGATAGAAACG AGGTGGGACACAGCACACCCCATGGGGAGGGGATAGAAACG < 41bp 0.863892434586576 0.64112541245659 0.7565239 0.2252174 prediction 0.445534044259971 Functional Loss - ATG7;VGLL4 ENSG00000144560;ENSG00000197548 UTR3 Human other chr3:11598599 chr3:11598601 . . 0 23 hm5C_associated_SNPs_79931 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:11598600-11598629
64251 chr2 32419009 32419009 1 + G A READ 32419006 + 32418986 32419026 41 GCTCTTTGTTTCAACCTGTTCACGATGCTTTCTATTCGGAA GCTCTTTGTTTCAACCTGTTCACAATGCTTTCTATTCGGAA < 41bp 0.734877902905631 0.512116367237017 0.023176432 0.040474564 prediction 0.445523071337229 Functional Loss - SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32419006 chr2:32419009 synonymous SNV . 0 24 hm5C_associated_SNPs_79935 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32418965-32419029
64251 chr3 10219598 10219598 1 + G A CESC 10219595 + 10219575 10219615 41 CGGGTGCAGGGTGTGAGCATCACGCGGGAGCTGCTGTGGTG CGGGTGCAGGGTGTGAGCATCACACGGGAGCTGCTGTGGTG < 41bp 0.722758933607576 0.474750359105151 0.37320322 0.093122125 prediction 0.445517867215152 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10219595 chr3:10219598 synonymous SNV . 0 24 hm5C_associated_SNPs_79936 0 0 2 BUD13 POSTAR2 ENCODE chr3:10219461-10219598
64251 chr3 10219597 10219597 1 + C T PRAD 10219595 + 10219575 10219615 41 CGGGTGCAGGGTGTGAGCATCACGCGGGAGCTGCTGTGGTG CGGGTGCAGGGTGTGAGCATCATGCGGGAGCTGCTGTGGTG < 41bp 0.722758933607576 0.449177877708074 0.37320322 0.3784532 prediction 0.445517867215152 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10219595 chr3:10219597 nonsynonymous SNV 0.888 4 23 hm5C_associated_SNPs_79937 0 0 2 BUD13 POSTAR2 ENCODE chr3:10219461-10219598
64251 chrX 118587390 118587390 1 + C T rs184919649 118587388 + 118587368 118587408 41 TGAAGTGGCTGAGTGGATACCACGTTGTGAGGTCAGCCACT TGAAGTGGCTGAGTGGATACCATGTTGTGAGGTCAGCCACT < 41bp 0.791956054408272 0.569197771759226 0.12760499 0.19576138 prediction 0.445516565298091 Functional Loss - SLC25A43 ENSG00000077713 UTR3 Human protein_coding chrX:118587388 chrX:118587390 . . 0 23 hm5C_associated_SNPs_79938 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:118587369-118587419
64251 chr4 190873403 190873403 1 + G A BRCA 190873400 + 190873380 190873420 41 AGGGAACCTATATACATGCACTCGACAATGGTCTTTTTACC AGGGAACCTATATACATGCACTCAACAATGGTCTTTTTACC < 41bp 0.722750653294437 0.496191288113857 0.10352641 0.051734507 prediction 0.445501306588874 Functional Loss - FRG1 ENSG00000109536 CDS Human protein_coding chr4:190873400 chr4:190873403 nonsynonymous SNV 0.956 1 24 hm5C_associated_SNPs_79944 0 0 2 MTPAP POSTAR2 ENCODE chr4:190873402-190873443
64251 chr22 33253256 33253256 1 + G A LUAD 33253253 + 33253233 33253273 41 CAGATGTACCGAGGCTTCACCAAGATGCCCCATGTGCAGTA CAGATGTACCGAGGCTTCACCAAAATGCCCCATGTGCAGTA < 41bp 0.790011356999613 0.567266823642185 0.82561374 0.22632596 prediction 0.445489066714856 Functional Loss - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33253253 chr22:33253256 synonymous SNV . 0 24 hm5C_associated_SNPs_79947 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr22:33253256-33253279
64251 chr8 19221662 19221662 1 + C T UCEC 19221660 + 19221640 19221680 41 AAGACTACAAGAGGTTATCCCTCGGGGCCCAGAAAGGAAGA AAGACTACAAGAGGTTATCCCTTGGGGCCCAGAAAGGAAGA < 41bp 0.859731824590416 0.636987462669838 0.0935463 0.08198786 prediction 0.445488723841157 Functional Loss - SH2D4A ENSG00000104611 CDS Human protein_coding chr8:19221660 chr8:19221662 synonymous SNV . 0 23 hm5C_associated_SNPs_79948 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:19221653-19221679
64251 chr11 65266481 65266481 1 + C T CESC 65266479 + 65266459 65266499 41 TTCCGGTGATGCGAGTTGTTCTCCGTCTATAAATACGCCTC TTCCGGTGATGCGAGTTGTTCTTCGTCTATAAATACGCCTC < 41bp 0.722743304173496 0.472498177343341 0.09384969 0.06772536 prediction 0.445486608346993 Functional Loss - MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266479 chr11:65266481 . . 0 23 hm5C_associated_SNPs_79949 0 0 1 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chr11:65266480-65266500
64251 chr14 77579932 77579932 1 + G T SKCM 77579930 + 77579910 77579950 41 CCAGGAACTACTTGCCCATTCTGAATTCTTACACCAAAATA CCAGGAACTACTTGCCCATTCTTAATTCTTACACCAAAATA < 41bp 0.722727981058818 0.39270929763005 0.06197369 0.05729142 prediction 0.445455962117635 Functional Loss - CIPC ENSG00000198894 CDS Human protein_coding chr14:77579930 chr14:77579932 synonymous SNV . 0 23 hm5C_associated_SNPs_79955 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:77579902-77579935
64251 chr19 7986621 7986621 1 + G A SKCM 7986618 + 7986598 7986638 41 GGATCTGGCTGAGAAGATAACAGGGCCACTGGAAGAAGCCC GGATCTGGCTGAGAAGATAACAGAGCCACTGGAAGAAGCCC < 41bp 0.803329582696653 0.580602361283289 0.91619205 0.90601325 prediction 0.445454442826728 Functional Loss - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7986618 chr19:7986621 nonsynonymous SNV 0.952 2 24 hm5C_associated_SNPs_79956 0 0 1 LIN28B POSTAR2 ENCODE chr19:7986592-7986659
64251 chrX 77369388 77369388 1 + G T SARC 77369386 + 77369366 77369406 41 TTGCTGTAGAACTCAAATCTCTGCTGGGCAAGTAAGTGCCA TTGCTGTAGAACTCAAATCTCTTCTGGGCAAGTAAGTGCCA < 41bp 0.722725718695981 0.378915288447137 0.2520088 0.16022882 prediction 0.445451437391961 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77369386 chrX:77369388 synonymous SNV . 0 23 hm5C_associated_SNPs_79958 0 0 10 BUD13 POSTAR2 ENCODE chrX:77369361-77369425
64251 chr16 70497656 70497656 1 + G A LUAD 70497653 + 70497633 70497673 41 CTGCTGGTGGCTGCTGAACACCTGAGTGCCCGGGCAGGCTT CTGCTGGTGGCTGCTGAACACCTAAGTGCCCGGGCAGGCTT < 41bp 0.774233574817847 0.551508460026442 0.42188707 0.21161169 prediction 0.445450229582811 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70497653 chr16:70497656 synonymous SNV . 0 24 hm5C_associated_SNPs_79959 0 0 2 PPIG POSTAR2 ENCODE chr16:70497577-70497668
64251 chr18 72180860 72180860 1 + C T CESC 72180858 + 72180838 72180878 41 AACGAGGCCGTGGCCGCCGTCACGGAAGAGGAGCACAAGCT AACGAGGCCGTGGCCGCCGTCATGGAAGAGGAGCACAAGCT < 41bp 0.72272188169219 0.438852451130528 0.2734964 0.37366354 prediction 0.445443763384381 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72180858 chr18:72180860 nonsynonymous SNV 0.020 3 23 hm5C_associated_SNPs_79960 0 0 2 GRWD1 POSTAR2 ENCODE chr18:72180783-72180865
64251 chr18 72180861 72180861 1 + G T LUAD 72180858 + 72180838 72180878 41 AACGAGGCCGTGGCCGCCGTCACGGAAGAGGAGCACAAGCT AACGAGGCCGTGGCCGCCGTCACTGAAGAGGAGCACAAGCT < 41bp 0.72272188169219 0.315993288824178 0.2734964 0.07182926 prediction 0.445443763384381 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72180858 chr18:72180861 synonymous SNV . 0 24 hm5C_associated_SNPs_79961 0 0 2 GRWD1 POSTAR2 ENCODE chr18:72180783-72180865
64251 chr3 158519924 158519924 1 + C T BLCA 158519922 + 158519902 158519942 41 AGTTGTCACCACTTTCCCCTCTCCGTCTCCTGCGGGCGCAA AGTTGTCACCACTTTCCCCTCTTCGTCTCCTGCGGGCGCAA < 41bp 0.799637687326408 0.576917198974984 0.10169712 0.07038993 prediction 0.445440976702849 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158519922 chr3:158519924 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_79964 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:158519897-158519935
64251 chr6 35286024 35286024 1 + G A rs541285645 35286021 + 35286001 35286041 41 AGGACCTGAAGCAGAAACGGCGCGAGCAGCGGGAGCAGCGG AGGACCTGAAGCAGAAACGGCGCAAGCAGCGGGAGCAGCGG < 41bp 0.781884967197591 0.559167462162142 0.34603083 0.20152861 prediction 0.445435010070898 Functional Loss - DEF6 ENSG00000023892 CDS Human protein_coding chr6:35286021 chr6:35286024 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_79967 0 0 2 PPIG POSTAR2 ENCODE chr6:35286002-35286064
64251 chr11 67379039 67379039 1 + C T PAAD 67379037 + 67379017 67379057 41 GCGGTGATCGTCATGGACCGCTCGGTAAGGGTTCACACACC GCGGTGATCGTCATGGACCGCTTGGTAAGGGTTCACACACC < 41bp 0.821795107503653 0.599077909862453 0.07303235 0.07169819 prediction 0.4454343952824 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67379037 chr11:67379039 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_79968 2 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:67379000-67379039
64251 chr20 3204161 3204161 1 + C T rs553880142 3204159 + 3204139 3204179 41 GGGGATCTGGGGAGGGCTAGCCCAAAACCTCCCGCATCGGG GGGGATCTGGGGAGGGCTAGCCTAAAACCTCCCGCATCGGG < 41bp 0.750236705326219 0.527526565766514 0.3956853 0.2703749 prediction 0.44542027911941 Functional Loss - ITPA ENSG00000125877 UTR3 Human protein_coding chr20:3204159 chr20:3204161 . . 0 23 hm5C_associated_SNPs_79974 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr20:3204160-3204180
64251 chr8 98739041 98739041 1 + G A rs113976575 98739038 + 98739018 98739058 41 GCTGGCCGGGTGCAGTGGCTCACGTCTGTAATCCCAGCACT GCTGGCCGGGTGCAGTGGCTCACATCTGTAATCCCAGCACT < 41bp 0.777523105492332 0.554813068638628 0.19080561 0.06986287 prediction 0.445420073707408 Functional Loss - MTDH ENSG00000147649 UTR3 Human protein_coding chr8:98739038 chr8:98739041 . . 0 24 hm5C_associated_SNPs_79975 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:98739012-98739041
64251 chr17 42429721 42429721 1 + G C BLCA 42429717 + 42429697 42429737 41 CTTCCCCGCCAGGCTGTGTGCTGCGAGGATCGCCAGCACTG CTTCCCCGCCAGGCTGTGTGCTGCCAGGATCGCCAGCACTG < 41bp 0.72270897102151 0.426083668151688 0.3919836 0.1890291 prediction 0.445417942043021 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42429717 chr17:42429721 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_79977 0 0 9 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:42429720-42429740
64251 chr20 25255248 25255248 1 + G A SKCM 25255245 + 25255225 25255265 41 CAGGTAGAGGAGGCCGATGACTGGCTGCGCTACGGCAACCC CAGGTAGAGGAGGCCGATGACTGACTGCGCTACGGCAACCC < 41bp 0.792978946737617 0.570271716387567 0.57155496 0.3248036 prediction 0.445414460700099 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25255245 chr20:25255248 stopgain 0.997 1 24 hm5C_associated_SNPs_79978 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:25255243-25255270
64251 chr3 14173128 14173128 1 + C T UCEC 14173125 + 14173105 14173145 41 TCCATCTTCCGGCTGTGAAACTGCGGAGGCACGTGGAGATG TCCATCTTCCGGCTGTGAAACTGTGGAGGCACGTGGAGATG < 41bp 0.729959686075987 0.507261605375229 0.4203137 0.2079489 prediction 0.445396161401516 Functional Loss - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14173125 chr3:14173128 nonsynonymous SNV 0.957 3 24 hm5C_associated_SNPs_79984 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:14173121-14173150
64251 chr17 66511664 66511664 1 + C T BRCA 66511662 + 66511642 66511682 41 TATTGTGCAGTTGTGCACTGCTCGACCTGAGAGACCCATGG TATTGTGCAGTTGTGCACTGCTTGACCTGAGAGACCCATGG < 41bp 0.722690243853991 0.44487908364335 0.18083584 0.063257635 prediction 0.445380487707982 Functional Loss - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66511662 chr17:66511664 stopgain 0.709 1 23 hm5C_associated_SNPs_79991 1 0 14 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:66511638-66511670
64251 chr17 66511665 66511665 1 + G T HNSC 66511662 + 66511642 66511682 41 TATTGTGCAGTTGTGCACTGCTCGACCTGAGAGACCCATGG TATTGTGCAGTTGTGCACTGCTCTACCTGAGAGACCCATGG < 41bp 0.722690243853991 0.343610957554336 0.18083584 0.26263687 prediction 0.445380487707982 Functional Loss - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66511662 chr17:66511665 nonsynonymous SNV 0.715 2 24 hm5C_associated_SNPs_79992 0 0 14 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:66511638-66511670
64251 chr2 178081439 178081439 1 + G A UCEC 178081436 + 178081416 178081456 41 GATCTGGCAATTTTATGGGTCGCGGAGGGAACTTTGGAGGT GATCTGGCAATTTTATGGGTCGCAGAGGGAACTTTGGAGGT < 41bp 0.772216564048451 0.549529153983459 0.7514691 0.36067513 prediction 0.445374820129984 Functional Loss - HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178081436 chr2:178081439 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_79994 0 0 27 SRSF1 POSTAR2 GSE83923,GSM2221664 chr2:178081420-178081440
64251 chr1 201966602 201966602 1 + C T COAD 201966600 + 201966580 201966620 41 AGTTGGTTTGGGAACCTGGTCACCAACGCCAACTGGGGTGA AGTTGGTTTGGGAACCTGGTCATCAACGCCAACTGGGGTGA < 41bp 0.865060952887335 0.64237584485558 0.07283133 0.078888655 prediction 0.44537021606351 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201966600 chr1:201966602 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_79996 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201966582-201966620
64251 chr1 11810280 11810280 1 + G A rs367556539 11810277 + 11810257 11810297 41 CACGCTGCGCCCGGCCCTGCCCCGGGCCTTCCTCGTGCCTG CACGCTGCGCCCGGCCCTGCCCCAGGCCTTCCTCGTGCCTG < 41bp 0.795597195111101 0.572913039907401 0.7900982 0.33375573 prediction 0.445368310407399 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810277 chr1:11810280 synonymous SNV . 0 24 hm5C_associated_SNPs_79998 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:11810252-11810342
64251 chr1 151237991 151237991 1 + C T BLCA 151237988 + 151237968 151238008 41 GGCTGATGCTCTCATCAGTTCTCCGATTTTGGCTGGTGAAG GGCTGATGCTCTCATCAGTTCTCTGATTTTGGCTGGTGAAG < 41bp 0.722680802236492 0.495919776136663 0.40267384 0.32367074 prediction 0.445361604472984 Functional Loss - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151237988 chr1:151237991 nonsynonymous SNV 0.978 4 24 hm5C_associated_SNPs_79999 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151237946-151237992
64251 chr21 45217979 45217979 1 + C T rs117749073 45217977 + 45217957 45217997 41 AAGAGGTCTGAGAAGCCGCCCGCAGGTGGGGGTCACACTGC AAGAGGTCTGAGAAGCCGCCCGTAGGTGGGGGTCACACTGC < 41bp 0.722673050686022 0.481417150469526 0.5227737 0.59222347 prediction 0.445346101372045 Functional Loss - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45217977 chr21:45217979 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_80004 0 0 1 PRPF8 POSTAR2 ENCODE chr21:45217966-45218023
64251 chr1 231490315 231490315 1 + A T rs138485647 231490311 + 231490291 231490331 41 CAGTTGATACCCATGACCCTCACCACCTCCAGAGGTCCCCA CAGTTGATACCCATGACCCTCACCTCCTCCAGAGGTCCCCA < 41bp 0.722670598142052 0.449493670814125 0.04500097 0.055123 prediction 0.445341196284104 Functional Loss - SPRTN ENSG00000010072 UTR3 Human protein_coding chr1:231490311 chr1:231490315 . . 0 25 hm5C_associated_SNPs_80005 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr1:231490300-231490320
64251 chr14 76620804 76620804 1 + G A UCEC 76620801 + 76620781 76620821 41 GGAGGAGATGGCGCTGAGCCCCCGACAGCAGAGGCGGCAGC GGAGGAGATGGCGCTGAGCCCCCAACAGCAGAGGCGGCAGC < 41bp 0.774930635169647 0.552263783767779 0.1610974 0.0881235 prediction 0.445333702803735 Functional Loss - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76620801 chr14:76620804 nonsynonymous SNV 0.989 3 24 hm5C_associated_SNPs_80006 0 0 3 BUD13 POSTAR2 ENCODE chr14:76620765-76620815
64251 chr2 113404993 113404993 1 + G A HNSC 113404990 + 113404970 113405010 41 GTGCAACTATTGGTTTCTCCCTCGTGGCAAAGGGGCAGGAG GTGCAACTATTGGTTTCTCCCTCATGGCAAAGGGGCAGGAG < 41bp 0.785278677381798 0.562612470910641 0.08730823 0.07167834 prediction 0.445332412942314 Functional Loss - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113404990 chr2:113404993 nonsynonymous SNV 0.928 5 24 hm5C_associated_SNPs_80007 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917667 chr2:113404970-113404995
64251 chr6 108616315 108616315 1 + T C HNSC 108616314 + 108616294 108616334 41 CCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGC CCTGGTCGCTCTTGGTTACCCCGCGCCCCTTAGCACAGAGC < 41bp 0.722661275064606 0.499693584408059 0.035864353 0.059235483 prediction 0.445322550129211 Functional Loss - AFG1L ENSG00000135537 CDS Human protein_coding chr6:108616314 chr6:108616315 nonsynonymous SNV 0.591 1 22 hm5C_associated_SNPs_80008 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:108616295-108616333
64251 chr6 108616316 108616316 1 + G T LUAD 108616314 + 108616294 108616334 41 CCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGC CCTGGTCGCTCTTGGTTACCCTTCGCCCCTTAGCACAGAGC < 41bp 0.722661275064606 0.374857897947413 0.035864353 0.019272238 prediction 0.445322550129211 Functional Loss - AFG1L ENSG00000135537 CDS Human protein_coding chr6:108616314 chr6:108616316 synonymous SNV . 0 23 hm5C_associated_SNPs_80009 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:108616295-108616333
64251 chr3 152132740 152132740 1 + C T COAD 152132738 + 152132718 152132758 41 TTGTTTCTCTAGGGCCGTTGCTCCAGGGAGAACTGCAAATA TTGTTTCTCTAGGGCCGTTGCTTCAGGGAGAACTGCAAATA < 41bp 0.722653330620725 0.417087809895295 0.9468428 0.16582772 prediction 0.44530666124145 Functional Loss - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152132738 chr3:152132740 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_80013 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:152132737-152132785
64251 chr16 67688097 67688097 1 + G A GBM 67688094 + 67688074 67688114 41 AAGGGAATGGGCTCAGTGCCCGCGTGGACGAGGGCGTGGAG AAGGGAATGGGCTCAGTGCCCGCATGGACGAGGGCGTGGAG < 41bp 0.784200060153091 0.561554110382342 0.19450867 0.023353964 prediction 0.445291899541498 Functional Loss - CARMIL2 ENSG00000159753 CDS Human protein_coding chr16:67688094 chr16:67688097 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_80018 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:67688095-67688128
64251 chr4 158057798 158057798 1 + G A SKCM 158057795 + 158057775 158057815 41 CCAATTTTCATGATGTGACCCAGGAAAACATCCTCCTCTTT CCAATTTTCATGATGTGACCCAGAAAAACATCCTCCTCTTT < 41bp 0.722638345219906 0.496233979339301 0.84736663 0.30220062 prediction 0.445276690439813 Functional Loss - GLRB ENSG00000109738 CDS Human protein_coding chr4:158057795 chr4:158057798 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_80020 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:158057780-158057800
64251 chr11 60703505 60703505 1 + C T STAD 60703503 + 60703483 60703523 41 GTGGTGGTGAGTGGGGCAGGCGCCGAGGGGCTGCCGCTGCA GTGGTGGTGAGTGGGGCAGGCGTCGAGGGGCTGCCGCTGCA < 41bp 0.743515230456614 0.520878978590445 0.7918031 0.7377542 prediction 0.445272503732338 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703503 chr11:60703505 nonsynonymous SNV 0.471 1 23 hm5C_associated_SNPs_80022 0 0 1 PPIG POSTAR2 ENCODE chr11:60703470-60703515
64251 chr17 73517534 73517534 1 + G T SARC 73517532 + 73517512 73517552 41 AGGCAGCTTAACCTGGATGCCAGCGTGCAGCACTTGGAGGA AGGCAGCTTAACCTGGATGCCATCGTGCAGCACTTGGAGGA < 41bp 0.722633903327033 0.364633033916514 0.47969994 0.28987008 prediction 0.445267806654065 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517532 chr17:73517534 nonsynonymous SNV 0.044 0 23 hm5C_associated_SNPs_80023 0 0 3 DDX24 POSTAR2 ENCODE chr17:73517503-73517561
64251 chr3 32495810 32495810 1 + G A rs146432122 32495807 + 32495787 32495827 41 AGGAGGACGTGTACTCCAGGCGAGGCCTCTGGACCTGTGTT AGGAGGACGTGTACTCCAGGCGAAGCCTCTGGACCTGTGTT < 41bp 0.798464217020016 0.575831066859098 0.69407636 0.14127025 prediction 0.445266300321835 Functional Loss - CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32495807 chr3:32495810 synonymous SNV . 0 24 hm5C_associated_SNPs_80025 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32495730-32495837
64251 chr7 2473134 2473134 1 + C T SKCM 2473132 + 2473112 2473152 41 AACCACACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCG AACCACACCAGCCTGCCCGCCTTGGCGCGCGAGGCCTTCCG < 41bp 0.722632903965928 0.468190209784066 0.20782644 0.04399416 prediction 0.445265807931856 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473132 chr7:2473134 nonsynonymous SNV 0.558 0 23 hm5C_associated_SNPs_80026 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2473130-2473194
64251 chr9 140510384 140510384 1 - C A rs143416717 140510387 - 140510367 140510407 41 CCAGGCAGGCCAGCCAGCATCACGGGGCCTCCCCTGGGGCT CCAGGCAGGCCAGCCAGCATCACTGGGCCTCCCCTGGGGCT < 41bp 0.933521544983306 0.71089057846584 0.94282997 0.5196275 prediction 0.445261933034933 Functional Loss - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510387 chr9:140510384 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_80028 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:140510363-140510385
64251 chr1 1268433 1268433 1 + G A BLCA 1268430 + 1268410 1268450 41 AGGGCTCAGTGCCCAGGCTCCACGACGTGGGCAGGTTCAAC AGGGCTCAGTGCCCAGGCTCCACAACGTGGGCAGGTTCAAC < 41bp 0.793476065277565 0.570850955754582 0.27670705 0.2678949 prediction 0.445250219045966 Functional Loss - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1268430 chr1:1268433 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_80031 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1268423-1268449
64251 chr10 94392288 94392288 1 + C T SKCM 94392285 + 94392265 94392305 41 CTACAAAAGATGTATCTGGTCTCCATTCCAAACTGGATCGT CTACAAAAGATGTATCTGGTCTCTATTCCAAACTGGATCGT < 41bp 0.722621677841889 0.487087658920183 0.924469 0.57700354 prediction 0.445243355683778 Functional Loss - KIF11 ENSG00000138160 CDS Human protein_coding chr10:94392285 chr10:94392288 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80034 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94392250-94392341
64251 chr7 73101384 73101384 1 + G T LUAD 73101382 + 73101362 73101402 41 TGCTGCTGGGGGATATGGGCCAGGGCATCCCATTCAAGCCA TGCTGCTGGGGGATATGGGCCATGGCATCCCATTCAAGCCA < 41bp 0.722613558332727 0.367613780098968 0.6860567 0.04970163 prediction 0.445227116665454 Functional Loss - BUD23 ENSG00000071462 CDS Human protein_coding chr7:73101382 chr7:73101384 nonsynonymous SNV 0.979 0 23 hm5C_associated_SNPs_80039 0 0 11 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:73101373-73101395
64251 chr22 20918929 20918929 1 + A T STAD 20918925 + 20918905 20918945 41 AGCAGCAGCTCCAGCAGCAGCAGCAGCAGCAGCAGCATCTA AGCAGCAGCTCCAGCAGCAGCAGCTGCAGCAGCAGCATCTA < 41bp 0.722609352101389 0.394759692997656 0.21479991 0.274127 prediction 0.445218704202779 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20918925 chr22:20918929 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_80043 0 0 4 IGF2BP1 POSTAR2 ENCODE chr22:20918798-20918941
64251 chr15 83503023 83503023 1 + C T rs187268195 83503021 + 83503001 83503041 41 GCTGGTCTTGAACTCCTGACCTCGTGATCCACCTGCCTTGG GCTGGTCTTGAACTCCTGACCTTGTGATCCACCTGCCTTGG < 41bp 0.73357041266549 0.510969519201244 0.1571227 0.10169503 prediction 0.445201786928492 Functional Loss - WHAMM ENSG00000156232 UTR3 Human protein_coding chr15:83503021 chr15:83503023 . . 0 23 hm5C_associated_SNPs_80045 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:83503016-83503054
64251 chr14 65197885 65197885 1 + C T LUSC 65197882 + 65197862 65197902 41 GGCATGAGCACGCGGTCCGGCTCCAGGTGCTCTGGGGCTGG GGCATGAGCACGCGGTCCGGCTCTAGGTGCTCTGGGGCTGG < 41bp 0.72360242052075 0.501003366740889 0.7028878 0.2636075 prediction 0.445198107559722 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65197882 chr14:65197885 stopgain 0.696 1 24 hm5C_associated_SNPs_80049 0 0 3 PPIG POSTAR2 ENCODE chr14:65197778-65197888
64251 chr10 11911764 11911764 1 + G A rs117789748 11911761 + 11911741 11911781 41 CCCCGTTCAGGGAGGGCCGGCCCGGGGAGTGGAGGACACCT CCCCGTTCAGGGAGGGCCGGCCCAGGGAGTGGAGGACACCT < 41bp 0.722596583921293 0.479582722439492 0.43353647 0.77164173 prediction 0.445193167842585 Functional Loss - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11911761 chr10:11911764 nonsynonymous SNV 0.058 1 24 hm5C_associated_SNPs_80051 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr10:11911751-11911771
64251 chr19 9453173 9453173 1 + G A LIHC 9453170 + 9453150 9453190 41 AAAACACAGGCGAACTCACACTGGAGAAAAGCCTTATGAAT AAAACACAGGCGAACTCACACTGAAGAAAAGCCTTATGAAT < 41bp 0.722592923752173 0.499814441960592 0.271959 0.089566916 prediction 0.445185847504346 Functional Loss - ZNF559 ENSG00000188321 CDS Human protein_coding chr19:9453170 chr19:9453173 nonsynonymous SNV 0.961 3 24 hm5C_associated_SNPs_80056 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:9453155-9453175
64251 chr12 110032871 110032871 1 + C T GBM 110032869 + 110032849 110032889 41 ACCAGCACCATCTGAATGCCCTCGGCGTGGGCCACGCCTCT ACCAGCACCATCTGAATGCCCTTGGCGTGGGCCACGCCTCT < 41bp 0.722591093109289 0.442495671545154 0.14224342 0.10024482 prediction 0.445182186218577 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110032869 chr12:110032871 synonymous SNV . 0 23 hm5C_associated_SNPs_80057 1 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr6 7579933 7579933 1 + G A rs28763964 7579930 + 7579910 7579950 41 GCCATCAAGGAGAAGGAGTACGAGATTGAAAGGTTGAGGGT GCCATCAAGGAGAAGGAGTACGAAATTGAAAGGTTGAGGGT < 41bp 0.730516966551852 0.50792999530093 0.43786067 0.18081856 prediction 0.445173942501844 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7579930 chr6:7579933 synonymous SNV . 0 24 hm5C_associated_SNPs_80060 8 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7579920-7579940
64251 chr19 17453146 17453146 1 + G A rs577395971 17453143 + 17453123 17453163 41 CTGGAGTTCAGTGGTGCGACCTCGGCTTACTGCAACCTCCA CTGGAGTTCAGTGGTGCGACCTCAGCTTACTGCAACCTCCA < 41bp 0.722580653563247 0.488095227862949 0.40947273 0.24694726 prediction 0.445161307126495 Functional Loss - GTPBP3 ENSG00000130299 UTR3 Human protein_coding chr19:17453143 chr19:17453146 . . 0 24 hm5C_associated_SNPs_80063 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:17453114-17453148
64251 chr12 56536096 56536096 1 + G A LUSC 56536093 + 56536073 56536113 41 GGGGTGAGGGCACTGGCGTGCTGGGCTCATTATCCCTGCCC GGGGTGAGGGCACTGGCGTGCTGAGCTCATTATCCCTGCCC < 41bp 0.798269355858731 0.575690331699966 0.8325645 0.7154845 prediction 0.445158048317531 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56536093 chr12:56536096 nonsynonymous SNV 0.352 4 24 hm5C_associated_SNPs_80064 0 0 4 FXR2 POSTAR2 ENCODE chr12:56536068-56536099
64251 chr8 19221664 19221664 1 + G C rs877386 19221660 + 19221640 19221680 41 AAGACTACAAGAGGTTATCCCTCGGGGCCCAGAAAGGAAGA AAGACTACAAGAGGTTATCCCTCGCGGCCCAGAAAGGAAGA < 41bp 0.859731824590416 0.637156311243683 0.0935463 0.21813557 prediction 0.445151026693467 Functional Loss - SH2D4A ENSG00000104611 CDS Human protein_coding chr8:19221660 chr8:19221664 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_80066 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:19221653-19221679
64251 chr19 17379746 17379746 1 + G T BRCA 17379744 + 17379724 17379764 41 CGGGCAGTAGGGGCACAGGCCAGCGTGGGCAGCCGCAGCGA CGGGCAGTAGGGGCACAGGCCATCGTGGGCAGCCGCAGCGA < 41bp 0.907978879705276 0.685407709876631 0.8382579 0.69581336 prediction 0.445142339657289 Functional Loss - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17379744 chr19:17379746 nonsynonymous SNV 0.462 2 23 hm5C_associated_SNPs_80070 0 0 8 GPKOW POSTAR2 ENCODE chr19:17379664-17379750
64251 chr15 66821212 66821212 1 + C T HNSC 66821209 + 66821189 66821229 41 GACCTTGAAGCATGACACTGCTGCAGTCGATCGTTCCGTCA GACCTTGAAGCATGACACTGCTGTAGTCGATCGTTCCGTCA < 41bp 0.727542782843995 0.504972525913577 0.19590962 0.19795594 prediction 0.445140513860836 Functional Loss - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66821209 chr15:66821212 nonsynonymous SNV 0.080 3 24 hm5C_associated_SNPs_80071 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:66821202-66821268
64251 chr3 9517717 9517717 1 + A T LUSC 9517713 + 9517693 9517733 41 ACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCA ACCGTGGGAGTGGGGGTGTGCACCTGTACCGACTCCAGCCA < 41bp 0.89387570795649 0.671329909315953 0.08448565 0.06450066 prediction 0.445091597281074 Functional Loss - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517713 chr3:9517717 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_80082 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:9517695-9517721
64251 chr1 160181469 160181469 1 + G A SKCM 160181466 + 160181446 160181486 41 GAGATCACTACTGGCAGTGCCTGGTTTAGCTTCCTGGAGAG GAGATCACTACTGGCAGTGCCTGATTTAGCTTCCTGGAGAG < 41bp 0.722545744507233 0.476300062942246 0.2117863 0.06449643 prediction 0.445091489014467 Functional Loss - PEA15 ENSG00000162734 CDS Human protein_coding chr1:160181466 chr1:160181469 stopgain 1.000 1 24 hm5C_associated_SNPs_80083 0 0 1 YBX3 POSTAR2 ENCODE chr1:160181457-160181501
64251 chr16 72130354 72130354 1 + G A GBM 72130351 + 72130331 72130371 41 CTGAGGAAGAGGGCGGTGACCAGGCTGGCCAAAATATCCGG CTGAGGAAGAGGGCGGTGACCAGACTGGCCAAAATATCCGG < 41bp 0.779137029645627 0.556595722063287 0.87473845 0.8417299 prediction 0.44508261516468 Functional Loss - DHX38 ENSG00000140829;ENSG00000140829 exonic;splicing Human other chr16:72130351 chr16:72130354 nonsynonymous SNV 0.900 0 24 hm5C_associated_SNPs_80086 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:72130343-72130367
64251 chr17 62522265 62522265 1 + G A BLCA 62522262 + 62522242 62522282 41 CAAGAAAGAGATTAACAGAACAAGAATTACATGATGTATCA CAAGAAAGAGATTAACAGAACAAAAATTACATGATGTATCA < 41bp 0.732968347905836 0.510427738995114 0.52065724 0.30914778 prediction 0.445081217821444 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62522262 chr17:62522265 nonsynonymous SNV 0.755 1 24 hm5C_associated_SNPs_80087 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:62522230-62522271
64251 chr16 28507082 28507082 1 + G C BRCA 28507078 + 28507058 28507098 41 TGCAGGGGAAACTGAGGAGCCTGGGGCCGAAGGGGCTGGGA TGCAGGGGAAACTGAGGAGCCTGGCGCCGAAGGGGCTGGGA < 41bp 0.871993014179811 0.649453232871676 0.89674574 0.77608156 prediction 0.445079562616271 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507078 chr16:28507082 synonymous SNV . 0 25 hm5C_associated_SNPs_80088 0 0 3 AARS POSTAR2 ENCODE chr16:28507060-28507090
64251 chr2 27873016 27873016 1 + G T UCEC 27873014 + 27872994 27873034 41 GCCATGAAGAGCCAGCATTCCAGAATTTTATGCAAGAATCG GCCATGAAGAGCCAGCATTCCATAATTTTATGCAAGAATCG < 41bp 0.72253914394043 0.403201364121348 0.3729149 0.13145211 prediction 0.445078287880859 Functional Loss - GPN1 ENSG00000198522 CDS Human protein_coding chr2:27873014 chr2:27873016 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_80089 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:27873016-27873059
64251 chr10 70864509 70864509 1 + A T rs114132591 70864505 + 70864485 70864525 41 TACTGCTTTACCTTTTTTTCCTGGATATCTGTGTATTTTCA TACTGCTTTACCTTTTTTTCCTGGTTATCTGTGTATTTTCA < 41bp 0.722538405643306 0.460811587013354 0.31176442 0.22385433 prediction 0.445076811286612 Functional Loss - SRGN ENSG00000122862 UTR3 Human protein_coding chr10:70864505 chr10:70864509 . . 0 25 hm5C_associated_SNPs_80090 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:70863920-70864540
64251 chr3 127981029 127981029 1 + G A UCEC 127981026 + 127981006 127981046 41 AGCCGGGGGGACCAGAGGCCCCCGAAACTGAAGCTCCACAG AGCCGGGGGGACCAGAGGCCCCCAAAACTGAAGCTCCACAG < 41bp 0.737165864259804 0.514644328169634 0.84713364 0.50505716 prediction 0.445043072180341 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981026 chr3:127981029 nonsynonymous SNV 0.897 2 24 hm5C_associated_SNPs_80095 0 0 2 BUD13 POSTAR2 ENCODE chr3:127981000-127981039
64251 chr12 6342621 6342621 1 + C T ACC 6342618 + 6342598 6342638 41 GATATTCGCCATTGAAATAGCTGCGGCCATCTGGGGATATT GATATTCGCCATTGAAATAGCTGTGGCCATCTGGGGATATT < 41bp 0.72444214984617 0.501921679403149 0.2173962 0.06261051 prediction 0.445040940886043 Functional Loss - CD9 ENSG00000010278 CDS Human protein_coding chr12:6342618 chr12:6342621 nonsynonymous SNV 0.854 3 24 hm5C_associated_SNPs_80097 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:6342619-6342643
64251 chr11 47270510 47270510 1 + A C rs532907382 47270509 + 47270489 47270529 41 AGTCTCGGTGGGATTGCGTGCAGGAGGGTCGTGGTCTGGCT AGTCTCGGTGGGATTGCGTGCCGGAGGGTCGTGGTCTGGCT < 41bp 0.771722537820273 0.549206146409305 0.9062089 0.8851625 prediction 0.445032782821936 Functional Loss - NR1H3 ENSG00000025434 UTR5 Human protein_coding chr11:47270509 chr11:47270510 . . 0 22 hm5C_associated_SNPs_80101 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:47270496-47270518
64251 chr1 23696044 23696044 1 + G T GBM 23696041 + 23696021 23696061 41 CGTAGACTTGCAGGCGAAGCCCAGATATCGTAGGCTGATCC CGTAGACTTGCAGGCGAAGCCCATATATCGTAGGCTGATCC < 41bp 0.722513189138871 0.335041824967393 0.1486485 0.03920409 prediction 0.445026378277742 Functional Loss - ZNF436-AS1 ENSG00000249087 CDS Human antisense chr1:23696041 chr1:23696044 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_80105 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:23696017-23696046
64251 chr11 64972327 64972327 1 + G C BLCA 64972326 + 64972306 64972346 41 ACTATTGGCTTCGCGGTCTACGAGGTCAGGAGGGTGGATCA ACTATTGGCTTCGCGGTCTACCAGGTCAGGAGGGTGGATCA < 41bp 0.875483270225969 0.652979869485329 0.9007436 0.8895755 prediction 0.44500680148128 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64972326 chr11:64972327 nonsynonymous SNV 0.284 1 22 hm5C_associated_SNPs_80108 0 0 4 BUD13 POSTAR2 ENCODE chr11:64972305-64972342
64251 chr17 7490569 7490569 1 + C T UCEC 7490567 + 7490547 7490587 41 GCTGTTTGGGGGCTCCCTGGCCCGAATCTTCACTTCCATTC GCTGTTTGGGGGCTCCCTGGCCTGAATCTTCACTTCCATTC < 41bp 0.841862233007465 0.61936211688419 0.08584246 0.06979442 prediction 0.44500023224655 Functional Loss - MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7490567 chr17:7490569 stopgain 0.998 3 23 hm5C_associated_SNPs_80109 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:7490550-7490582
64251 chr17 7468141 7468141 1 + G T CESC 7468139 + 7468119 7468159 41 GGCCTGGGGAGAAAGCCGGCCAGCACAGCCCCCTGCGAGAG GGCCTGGGGAGAAAGCCGGCCATCACAGCCCCCTGCGAGAG < 41bp 0.722499650910137 0.388929043793749 0.22362462 0.15427858 prediction 0.444999301820274 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7468139 chr17:7468141 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_80110 0 0 1 PPIG POSTAR2 ENCODE chr17:7468095-7468174
64251 chr22 20920952 20920952 1 + C T UCEC 20920950 + 20920930 20920970 41 GCTGCAGCAGATGCATCACACACAGCACCACCAGCCGCCAC GCTGCAGCAGATGCATCACACATAGCACCACCAGCCGCCAC < 41bp 0.722490338140219 0.485214290467326 0.07027921 0.13418195 prediction 0.444980676280439 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20920950 chr22:20920952 stopgain 0.943 0 23 hm5C_associated_SNPs_80115 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr22:20920940-20920960
64251 chr6 117869143 117869143 1 + G A UCEC 117869140 + 117869120 117869160 41 TCCACCTTCCGGCCCATGGACACGGATGCCGAGGAGGCAGG TCCACCTTCCGGCCCATGGACACAGATGCCGAGGAGGCAGG < 41bp 0.783746162781721 0.561258365716886 0.7253827 0.6016177 prediction 0.444975594129669 Functional Loss - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117869140 chr6:117869143 synonymous SNV . 0 24 hm5C_associated_SNPs_80119 0 0 3 BUD13 POSTAR2 ENCODE chr6:117869024-117869147
64251 chr7 75615510 75615510 1 + G A UCEC 75615507 + 75615487 75615527 41 AGCACCTGCTAAAGCAAGACCGAGAGCACCTGTGGAAGTTG AGCACCTGCTAAAGCAAGACCGAAAGCACCTGTGGAAGTTG < 41bp 0.794803249014192 0.572317580143348 0.83474827 0.38894823 prediction 0.444971337741687 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75615507 chr7:75615510 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_80121 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:75615500-75615520
64251 chr11 608546 608546 1 + G A DLBC 608543 + 608523 608563 41 TCTGAATCCAGGGACAGGAGCTCGAGGTCAGCGTCACCATC TCTGAATCCAGGGACAGGAGCTCAAGGTCAGCGTCACCATC < 41bp 0.807866277380414 0.585383338530075 0.5082334 0.2971902 prediction 0.444965877700678 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608543 chr11:608546 synonymous SNV . 0 24 hm5C_associated_SNPs_80124 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr11:608516-608546
64251 chr17 73818666 73818666 1 + G A rs373016008 73818663 + 73818643 73818683 41 GCCAGGGGCTGCCGAGCTGGCCCGACTTCGGCAAGAGCTGG GCCAGGGGCTGCCGAGCTGGCCCAACTTCGGCAAGAGCTGG < 41bp 0.780692357278874 0.558217083898478 0.02919203 0.027581096 prediction 0.444950546760791 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73818663 chr17:73818666 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_80129 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:73818645-73818689
64251 chr12 49522587 49522587 1 - G A KIRC 49522590 - 49522570 49522610 41 AAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCACCCCA AAGAAGTCCAAGCTGGAGTTCTCTATTTACCCAGCACCCCA < 41bp 0.726623378068517 0.504148530350979 0.9573467 0.87648934 prediction 0.444949695435076 Functional Loss - TUBA1B ENSG00000123416 CDS Human protein_coding chr12:49522590 chr12:49522587 synonymous SNV . 0 24 hm5C_associated_SNPs_80130 0 0 30 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:49522544-49522603
64251 chr19 17598037 17598037 1 + G A COAD 17598034 + 17598014 17598054 41 AAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCCCGAGG AAGTTTGATCAAGTTCTGCTCTGAAGACTTGGGGCCCGAGG < 41bp 0.78051550135333 0.558067407344037 0.31845734 0.034589797 prediction 0.444896188018585 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17598034 chr19:17598037 nonsynonymous SNV 0.063 3 24 hm5C_associated_SNPs_80143 0 0 1 PPIG POSTAR2 ENCODE chr19:17598019-17598112
64251 chr2 132021747 132021747 1 + G A SARC 132021744 + 132021724 132021764 41 GGTTCACCACCATGGCCGAGCGGGAAATCGTGCGTGACATC GGTTCACCACCATGGCCGAGCGGAAAATCGTGCGTGACATC < 41bp 0.770754713146702 0.548306936755329 0.91574013 0.7789066 prediction 0.444895552782746 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021744 chr2:132021747 nonsynonymous SNV 0.077 3 24 hm5C_associated_SNPs_80145 0 0 1 EIF3H POSTAR2 ENCODE chr2:132021724-132021840
64251 chr6 36076280 36076280 1 + C T rs6457878 36076278 + 36076258 36076298 41 CTGTGAGGGGAAGGCCTTTTCACGGGAACTCTCCAAATATT CTGTGAGGGGAAGGCCTTTTCATGGGAACTCTCCAAATATT < 41bp 0.790221148108045 0.567774681155667 0.11345866 0.07437849 prediction 0.444892933904756 Functional Loss - MAPK14 ENSG00000112062 UTR3 Human protein_coding chr6:36076278 chr6:36076280 . . 0 23 hm5C_associated_SNPs_80147 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:36076255-36076292
64251 chr19 5110659 5110659 1 + G A STAD 5110656 + 5110636 5110676 41 ACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTT ACGTGCCGGAAGGACATGGTCAAAATCTCCATGGACGTGTT < 41bp 0.781718554380909 0.559278190396238 0.072915524 0.049793363 prediction 0.444880727969342 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5110656 chr19:5110659 synonymous SNV . 0 24 hm5C_associated_SNPs_80149 0 0 6 DDX24 POSTAR2 ENCODE chr19:5110564-5110663
64251 chr1 15755446 15755446 1 + G A rs565482388 15755443 + 15755423 15755463 41 ACACCGGCGCTGGCTCCCTGCCCGGCCCGGCCCTCCCTGGC ACACCGGCGCTGGCTCCCTGCCCAGCCCGGCCCTCCCTGGC < 41bp 0.722434796104853 0.472640724198964 0.077055216 0.038637966 prediction 0.444869592209706 Functional Loss - EFHD2 ENSG00000142634 UTR3 Human protein_coding chr1:15755443 chr1:15755446 . . 0 24 hm5C_associated_SNPs_80152 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:15755411-15755464
64251 chr11 64854896 64854896 1 + G A UCEC 64854893 + 64854873 64854913 41 GCCGGCCTTGGGTTGGCTGGCCCGGCTGCTAAGGTACACAG GCCGGCCTTGGGTTGGCTGGCCCAGCTGCTAAGGTACACAG < 41bp 0.722434693494182 0.483995413581988 0.3997561 0.45513165 prediction 0.444869386988364 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854893 chr11:64854896 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_80153 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64854869-64854902
64251 chrX 84342677 84342677 1 + G T UCEC 84342674 + 84342654 84342694 41 AGATATAGATATGTACAGCACTAGAAGCTGAAGTAGACTGC AGATATAGATATGTACAGCACTATAAGCTGAAGTAGACTGC < 41bp 0.722434242807634 0.350027850650303 0.052871138 0.07114032 prediction 0.444868485615268 Functional Loss - APOOL ENSG00000155008 CDS Human protein_coding chrX:84342674 chrX:84342677 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_80154 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:84342624-84342677
64251 chr3 170141062 170141062 1 + G T LUAD 170141060 + 170141040 170141080 41 ATCCGGATGGGCCAGGAGCCCGGTGTGGCTAAGTACAGGCG ATCCGGATGGGCCAGGAGCCCGTTGTGGCTAAGTACAGGCG < 41bp 0.722433004524038 0.374480799559607 0.41255572 0.099405885 prediction 0.444866009048077 Functional Loss - CLDN11 ENSG00000013297 CDS Human protein_coding chr3:170141060 chr3:170141062 nonsynonymous SNV 0.933 4 23 hm5C_associated_SNPs_80156 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:170141045-170141074
64251 chr19 50385544 50385544 1 + C T READ 50385542 + 50385522 50385562 41 CACCACCTTCAGCAGCTTCTCCCGAGTGACCAACTTCTTCC CACCACCTTCAGCAGCTTCTCCTGAGTGACCAACTTCTTCC < 41bp 0.843604309651893 0.621182103418417 0.51112133 0.32858115 prediction 0.444844412466951 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385542 chr19:50385544 stopgain 0.998 0 23 hm5C_associated_SNPs_80161 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:50385531-50385553
64251 chr2 219677331 219677331 1 + G A rs149897566 219677328 + 219677308 219677348 41 GCTGCCTGCAGCGATCCATCCCCGAGGACACCGTGACCTTC GCTGCCTGCAGCGATCCATCCCCAAGGACACCGTGACCTTC < 41bp 0.72241876750652 0.472487368198075 0.29052123 0.025166571 prediction 0.444837535013039 Functional Loss - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677328 chr2:219677331 nonsynonymous SNV 0.060 0 24 hm5C_associated_SNPs_80162 1 0 2 RPS3 POSTAR2 ENCODE chr2:219677300-219677332
64251 chr2 219677330 219677330 1 + C T UCEC 219677328 + 219677308 219677348 41 GCTGCCTGCAGCGATCCATCCCCGAGGACACCGTGACCTTC GCTGCCTGCAGCGATCCATCCCTGAGGACACCGTGACCTTC < 41bp 0.72241876750652 0.429101784974377 0.29052123 0.08686197 prediction 0.444837535013039 Functional Loss - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677328 chr2:219677330 synonymous SNV . 0 23 hm5C_associated_SNPs_80163 0 0 2 RPS3 POSTAR2 ENCODE chr2:219677300-219677332
64251 chr20 4680118 4680118 1 + T C rs62637686 4680117 + 4680097 4680137 41 TGGTGGTGGCTGGGGACAGCCTCATGGTGGTGGCTGGGGTC TGGTGGTGGCTGGGGACAGCCCCATGGTGGTGGCTGGGGTC < 41bp 0.79319474166159 0.570777901787323 0.23661217 0.28352076 prediction 0.444833679748534 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680117 chr20:4680118 synonymous SNV . 0 22 hm5C_associated_SNPs_80164 1 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:4680111-4680140
64251 chr19 54377193 54377193 1 + C T COAD 54377191 + 54377171 54377211 41 CACGGCCGTTCGCGGGACCACGCCATCGCCGCCACCTTCTT CACGGCCGTTCGCGGGACCACGTCATCGCCGCCACCTTCTT < 41bp 0.836966442240077 0.614553007085322 0.5624462 0.09750286 prediction 0.444826870309509 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377191 chr19:54377193 nonsynonymous SNV 0.979 0 23 hm5C_associated_SNPs_80167 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:54377186-54377213
64251 chr5 132403232 132403232 1 + G T UCEC 132403230 + 132403210 132403250 41 TGATATTGTGCAGTTGCCTACAGGATTAACAGGTATAAAGG TGATATTGTGCAGTTGCCTACATGATTAACAGGTATAAAGG < 41bp 0.722412393487401 0.386840938211582 0.8319834 0.092838794 prediction 0.444824786974803 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132403230 chr5:132403232 stopgain 0.981 1 23 hm5C_associated_SNPs_80168 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132403180-132403250
64251 chr19 14574899 14574899 1 + C T UCEC 14574897 + 14574877 14574917 41 TATCGGTGGAGAAGCTGAACCTCGGCACTGACTCGGACAGC TATCGGTGGAGAAGCTGAACCTTGGCACTGACTCGGACAGC < 41bp 0.722411393124664 0.4460779964686 0.34620553 0.25585663 prediction 0.444822786249329 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574897 chr19:14574899 synonymous SNV . 0 23 hm5C_associated_SNPs_80170 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14574875-14574926
64251 chr11 67165543 67165543 1 + C T rs577540380 67165541 + 67165521 67165561 41 GGAATTCTAAGAGCCTTGGACCCGAGTGTGTGGCTAGGGTT GGAATTCTAAGAGCCTTGGACCTGAGTGTGTGGCTAGGGTT < 41bp 0.742557281366745 0.520150873757079 0.40507936 0.24209079 prediction 0.44481281521933 Functional Loss - RAD9A ENSG00000172613 UTR3 Human protein_coding chr11:67165541 chr11:67165543 . . 0 23 hm5C_associated_SNPs_80175 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:67165524-67165562
64251 chr6 109764212 109764212 1 + G A UCEC 109764209 + 109764189 109764229 41 GAAGGCAACACAATGGTACCCAAGAACTGCTACGTCAGCCA GAAGGCAACACAATGGTACCCAAAAACTGCTACGTCAGCCA < 41bp 0.787733126946429 0.56533558287392 0.8828747 0.898973 prediction 0.44479508814502 Functional Loss - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764209 chr6:109764212 synonymous SNV . 0 24 hm5C_associated_SNPs_80179 0 0 1 GRWD1 POSTAR2 ENCODE chr6:109764189-109764278
64251 chr2 173460625 173460625 1 + C T OV 173460622 + 173460602 173460642 41 GCTGCCTGGAAGCATTACAACACCAACCACGAGGCTGATGA GCTGCCTGGAAGCATTACAACACTAACCACGAGGCTGATGA < 41bp 0.737223276557138 0.514837171335245 0.019809663 0.04905832 prediction 0.444772210443787 Functional Loss - PDK1 ENSG00000152256 CDS Human protein_coding chr2:173460622 chr2:173460625 synonymous SNV . 0 24 hm5C_associated_SNPs_80184 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:173460622-173460641
64251 chr3 58116576 58116576 1 + C T CESC 58116574 + 58116554 58116594 41 GCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGC GCCCGTGTCCTGCAGTCCTTCATGGTGGACAGCAGCAAGGC < 41bp 0.810376478820504 0.587991599060816 0.6691265 0.30064344 prediction 0.444769759519377 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58116574 chr3:58116576 nonsynonymous SNV 0.492 5 23 hm5C_associated_SNPs_80187 0 0 6 FMR1 POSTAR2 ENCODE chr3:58116571-58116634
64251 chr19 44739461 44739461 1 + G A BLCA 44739458 + 44739438 44739478 41 AACTCATCAGAGAATTCACCCAGGAGAGAAACTCAATAGAT AACTCATCAGAGAATTCACCCAGAAGAGAAACTCAATAGAT < 41bp 0.773224704995267 0.550845939280714 0.84248364 0.29916555 prediction 0.444757531429105 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739458 chr19:44739461 nonsynonymous SNV 0.385 0 24 hm5C_associated_SNPs_80191 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44739407-44739504
64251 chr1 53679056 53679056 1 + C T BLCA 53679054 + 53679034 53679074 41 ATAAACCACAATGTCCTGTCCACGAGCACACTGAGCAGCCC ATAAACCACAATGTCCTGTCCATGAGCACACTGAGCAGCCC < 41bp 0.838049194477266 0.615691261149621 0.36717838 0.2720804 prediction 0.44471586665529 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53679054 chr1:53679056 nonsynonymous SNV 0.698 5 23 hm5C_associated_SNPs_80202 0 0 1 FXR2 POSTAR2 ENCODE chr1:53678976-53679093
64251 chr6 37358608 37358608 1 + G A UCEC 37358605 + 37358585 37358625 41 GATGGTCTGGAGGATTCTCTCTAGCCGTGACTCCGCTGCTC GATGGTCTGGAGGATTCTCTCTAACCGTGACTCCGCTGCTC < 41bp 0.796699811795011 0.574342623161528 0.79465055 0.37521318 prediction 0.444714377266965 Functional Loss - RNF8 ENSG00000112130 CDS Human protein_coding chr6:37358605 chr6:37358608 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_80203 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:37358581-37358678
64251 chr19 16942351 16942351 1 + G A LUSC 16942348 + 16942328 16942368 41 GACGTGTCTCGCAGCTCTTCCACGAGCACCCTGACCTCATT GACGTGTCTCGCAGCTCTTCCACAAGCACCCTGACCTCATT < 41bp 0.722356471439958 0.47935232888636 0.7528882 0.36721736 prediction 0.444712942879916 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16942348 chr19:16942351 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_80204 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:16942326-16942362
64251 chr12 6499987 6499987 1 + G A UCEC 6499984 + 6499964 6500004 41 AAGAGGGGGACCCTGGCCCTCCCGGGCTCTCTACACCCCAC AAGAGGGGGACCCTGGCCCTCCCAGGCTCTCTACACCCCAC < 41bp 0.757057290999022 0.53470267341251 0.15671751 0.06577039 prediction 0.444709235173023 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6499984 chr12:6499987 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_80205 0 0 2 DDX6 POSTAR2 ENCODE chr12:6499952-6499990
64251 chr21 35747803 35747803 1 + G A rs192071625 35747800 + 35747780 35747820 41 TTTCGGGACCTGTAGTTTTCCCCGGCAGGACGGTAGAAGTC TTTCGGGACCTGTAGTTTTCCCCAGCAGGACGGTAGAAGTC < 41bp 0.78590973747989 0.563555347698943 0.41784236 0.18695703 prediction 0.444708779561893 Functional Loss - SMIM11A;SMIM11B ENSG00000205670 UTR5 Human protein_coding chr21:35747800 chr21:35747803 . . 0 24 hm5C_associated_SNPs_80206 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:35747800-35747840
64251 chr13 103515050 103515050 1 + G A UCEC 103515047 + 103515027 103515067 41 CATAGTGACGCACCTGGGCTCCCGAATGGAAGGGAACTGAC CATAGTGACGCACCTGGGCTCCCAAATGGAAGGGAACTGAC < 41bp 0.722352698535129 0.485461780257139 0.0833644 0.04233572 prediction 0.444705397070258 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103515047 chr13:103515050 synonymous SNV . 0 24 hm5C_associated_SNPs_80208 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr13:103515040-103515054
64251 chr2 99980843 99980843 1 + G T PAAD 99980840 + 99980820 99980860 41 AACTAAATCCCAGAGAGAAGCCAGAGCCAGAGCCGAAGCTA AACTAAATCCCAGAGAGAAGCCATAGCCAGAGCCGAAGCTA < 41bp 0.722350878897694 0.339059550150241 0.31064194 0.01606226 prediction 0.444701757795387 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99980840 chr2:99980843 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80210 0 0 31 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:99980811-99980847
64251 chr19 7976353 7976353 1 + G T UCEC 7976350 + 7976330 7976370 41 GCAACAGGACAGTTTCCCTACAAGAACTGCAAGACGGACTT GCAACAGGACAGTTTCCCTACAATAACTGCAAGACGGACTT < 41bp 0.722342562687345 0.333159612850286 0.22087067 0.070513606 prediction 0.444685125374691 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976350 chr19:7976353 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80219 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:7976334-7976367
64251 chr4 39465209 39465209 1 + C T SKCM 39465207 + 39465187 39465227 41 GGAGGTGGAGAATATGCCACCGCCACAGCCACGATCATGGT GGAGGTGGAGAATATGCCACCGTCACAGCCACGATCATGGT < 41bp 0.848719423241558 0.626378792519614 0.3217006 0.06628433 prediction 0.444681261443888 Functional Loss - LIAS ENSG00000121897 CDS Human protein_coding chr4:39465207 chr4:39465209 nonsynonymous SNV 0.815 4 23 hm5C_associated_SNPs_80221 0 0 2 PRPF8 POSTAR2 ENCODE chr4:39465181-39465217
64251 chr12 122618406 122618406 1 + G T LUSC 122618403 + 122618383 122618423 41 TGTCACCCGGCCTCCCCAGCCACGGTTAACTTTTGTGCACC TGTCACCCGGCCTCCCCAGCCACTGTTAACTTTTGTGCACC < 41bp 0.722338237424591 0.311007006668123 0.39620957 0.5989804 prediction 0.444676474849182 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618403 chr12:122618406 nonsynonymous SNV 0.855 0 24 hm5C_associated_SNPs_80223 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:122618400-122618420
64251 chr12 122618405 122618405 1 + C T PAAD 122618403 + 122618383 122618423 41 TGTCACCCGGCCTCCCCAGCCACGGTTAACTTTTGTGCACC TGTCACCCGGCCTCCCCAGCCATGGTTAACTTTTGTGCACC < 41bp 0.722338237424591 0.451214809374136 0.39620957 0.37903607 prediction 0.444676474849182 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618403 chr12:122618405 nonsynonymous SNV 0.829 1 23 hm5C_associated_SNPs_80224 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:122618400-122618420
64251 chr10 70516175 70516175 1 + C T BLCA 70516173 + 70516153 70516193 41 CTCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAGC CTCAGAGTGGGAAACCCTCTCCTGAGGATACAAGCAGCAGC < 41bp 0.844029759751725 0.621698532927062 0.30637857 0.18864849 prediction 0.444662453649326 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70516173 chr10:70516175 stopgain 1.000 1 23 hm5C_associated_SNPs_80230 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70516152-70516233
64251 chr14 74960811 74960811 1 + G C rs201157942 74960810 + 74960790 74960830 41 GAGGCGTCGTCCTCCAGCCCCGAGGCCGGCGAAGGGCAGAT GAGGCGTCGTCCTCCAGCCCCCAGGCCGGCGAAGGGCAGAT < 41bp 0.884537283472952 0.662208081496859 0.576721 0.18334183 prediction 0.444658403952185 Functional Loss - ISCA2 ENSG00000119655;ENSG00000165898 CDS Human other chr14:74960810 chr14:74960811 nonsynonymous SNV 0.308 0 22 hm5C_associated_SNPs_80231 1 0 7 BUD13 POSTAR2 ENCODE chr14:74960668-74960854
64251 chr1 16091554 16091554 1 + G C PRAD 16091553 + 16091533 16091573 41 CCCCCGCGCCGCGATGTGGCCGTGGCGGAGGAAGTGAGGCA CCCCCGCGCCGCGATGTGGCCCTGGCGGAGGAAGTGAGGCA < 41bp 0.722307477235278 0.400485750713325 0.40847707 0.18128094 prediction 0.444614954470555 Functional Loss - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091553 chr1:16091554 nonsynonymous SNV 0.058 1 22 hm5C_associated_SNPs_80238 0 0 1 PPIG POSTAR2 ENCODE chr1:16091522-16091689
64251 chr5 180661468 180661468 1 + G A UCEC 180661465 + 180661445 180661485 41 CAGCGGGGATGCCAGCTCCTCGCGCCATCACCATCGCCGCC CAGCGGGGATGCCAGCTCCTCGCACCATCACCATCGCCGCC < 41bp 0.722304181310413 0.498183113025897 0.60277337 0.23390701 prediction 0.444608362620825 Functional Loss - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180661465 chr5:180661468 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_80241 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:180661466-180661499
64251 chr2 112725753 112725753 1 + G T SARC 112725751 + 112725731 112725771 41 ACTGAAGTCAGCATCCGTAACAGCACTGCACACAGCATTCT ACTGAAGTCAGCATCCGTAACATCACTGCACACAGCATTCT < 41bp 0.722302871566663 0.36672587897867 0.16031596 0.07701877 prediction 0.444605743133326 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112725751 chr2:112725753 nonsynonymous SNV 0.312 0 23 hm5C_associated_SNPs_80243 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:112725749-112725773
64251 chr18 29116302 29116302 1 + G T LUAD 29116299 + 29116279 29116319 41 TGAATGTTACTGCAGAGGACCTGGATGGACACCCAAACAGT TGAATGTTACTGCAGAGGACCTGTATGGACACCCAAACAGT < 41bp 0.722301252847288 0.331378255933399 0.49939558 0.07153079 prediction 0.444602505694575 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116299 chr18:29116302 nonsynonymous SNV 0.736 4 24 hm5C_associated_SNPs_80245 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:29116223-29116310
64251 chr17 80541916 80541916 1 + G C SKCM 80541915 + 80541895 80541935 41 CCCAGCCTCTCCCAATCACGCGGGAGTGCTGTCTGCTCACT CCCAGCCTCTCCCAATCACGCCGGAGTGCTGTCTGCTCACT < 41bp 0.890027450276198 0.667727798862683 0.9027425 0.84258676 prediction 0.44459930282703 Functional Loss - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80541915 chr17:80541916 synonymous SNV . 0 22 hm5C_associated_SNPs_80246 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:80541900-80541940
64251 chr19 55494074 55494074 1 + G A CESC 55494071 + 55494051 55494091 41 AAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGAG AAGGCCGCCCTGCTGGTCACCACACGGCCCAGGGCCCTGAG < 41bp 0.722296537691603 0.464215098887558 0.59977263 0.86204576 prediction 0.444593075383206 Functional Loss - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494071 chr19:55494074 synonymous SNV . 0 24 hm5C_associated_SNPs_80248 0 0 3 FMR1 POSTAR2 ENCODE chr19:55494060-55494133
64251 chr6 3114512 3114512 1 + C T rs17513574 3114510 + 3114490 3114530 41 CCCCTGGGTGAGACCAGAACCTCAGGGCTGATACTGTTGAG CCCCTGGGTGAGACCAGAACCTTAGGGCTGATACTGTTGAG < 41bp 0.74613605557466 0.523846632584687 0.13358912 0.16579652 prediction 0.444578845979947 Functional Loss - RIPK1 ENSG00000137275 UTR3 Human protein_coding chr6:3114510 chr6:3114512 . . 0 23 hm5C_associated_SNPs_80253 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr6:3114506-3114528
64251 chr2 239353225 239353225 1 + A C BRCA 239353221 + 239353201 239353241 41 GCGTCATGGATGCTGTTCTGCGCCACGGCTGTGAGGCAGCC GCGTCATGGATGCTGTTCTGCGCCCCGGCTGTGAGGCAGCC < 41bp 0.72228814479064 0.291886821745152 0.005834222 0.008942872 prediction 0.44457628958128 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239353221 chr2:239353225 nonsynonymous SNV 0.831 3 25 hm5C_associated_SNPs_80254 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:239353206-239353241
64251 chr1 155582326 155582326 1 + G A rs149058840 155582323 + 155582303 155582343 41 GTGGGAGCCTGGGCCTGCGACCCGAGCCACCTGTCAGCTTC GTGGGAGCCTGGGCCTGCGACCCAAGCCACCTGTCAGCTTC < 41bp 0.783302354919099 0.561015379027573 0.4810602 0.2078189 prediction 0.444573951783052 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582323 chr1:155582326 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_80255 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:155582325-155582326
64251 chr17 40717778 40717778 1 + C T rs151074271 40717776 + 40717756 40717796 41 AGCAGCTTGTGGAACAGAGCCACGTGGTGCTCAGCACCTTG AGCAGCTTGTGGAACAGAGCCATGTGGTGCTCAGCACCTTG < 41bp 0.722285861190133 0.454451216501297 0.27162707 0.32653517 prediction 0.444571722380267 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40717776 chr17:40717778 synonymous SNV . 0 23 hm5C_associated_SNPs_80259 1 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40717760-40717780
64251 chr12 51319257 51319257 1 + G A OV 51319254 + 51319234 51319274 41 TGGATGTGGTGGTCTGCACCCTGGTGCTGTGCTCTGTGAAG TGGATGTGGTGGTCTGCACCCTGATGCTGTGCTCTGTGAAG < 41bp 0.722280940223717 0.475638216325267 0.39973018 0.32840282 prediction 0.444561880447433 Functional Loss - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51319254 chr12:51319257 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_80263 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917669 chr12:51319242-51319269
64251 chr9 97220683 97220683 1 + C T COAD 97220680 + 97220660 97220700 41 GCACTGTATGGCTTCATATTCTACATGTTCCATGTGGAACT GCACTGTATGGCTTCATATTCTATATGTTCCATGTGGAACT < 41bp 0.765321062600607 0.54304203008359 0.4734522 0.16363817 prediction 0.444558065034034 Functional Loss - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97220680 chr9:97220683 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_80264 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:97220676-97220725
64251 chr15 28900520 28900520 1 + G A LUSC 28900517 + 28900497 28900537 41 GTGGAGAAGCTGTTTGACTTCTTGGGGAGCTTGCTCACTAT GTGGAGAAGCTGTTTGACTTCTTAGGGAGCTTGCTCACTAT < 41bp 0.764558753321981 0.54228319474771 0.23937479 0.096211225 prediction 0.444551117148543 Functional Loss - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28900517 chr15:28900520 . . 0 24 hm5C_associated_SNPs_80266 0 0 4 DDX24 POSTAR2 ENCODE chr15:28900509-28900691
64251 chr3 19988996 19988996 1 + G C rs115902578 19988995 + 19988975 19989015 41 GAAGCTTCGGCCCCGCAGCTCGGCTTGCTGCGGTCTCAGGT GAAGCTTCGGCCCCGCAGCTCCGCTTGCTGCGGTCTCAGGT < 41bp 0.722267996699019 0.422617994957932 0.32743016 0.28384474 prediction 0.444535993398038 Functional Loss - RAB5A ENSG00000144566 UTR5 Human protein_coding chr3:19988995 chr3:19988996 . . 0 22 hm5C_associated_SNPs_80271 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:19988975-19988996
64251 chr16 68390697 68390697 1 + C T rs61733486 68390695 + 68390675 68390715 41 GCCTCCTGGAGCCTGCAGACCCCGAGGTAGTGCCTGCGCAC GCCTCCTGGAGCCTGCAGACCCTGAGGTAGTGCCTGCGCAC < 41bp 0.822738150659882 0.600472494575716 0.40073282 0.32265118 prediction 0.444531312168332 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390695 chr16:68390697 synonymous SNV . 0 23 hm5C_associated_SNPs_80273 0 0 3 PPIG POSTAR2 ENCODE chr16:68390631-68390704
64251 chr12 105380159 105380159 1 + G A rs371639910 105380156 + 105380136 105380176 41 GGTCCATGGCAAGCCCAAGGCTAGCCCGAGTTGTTCGTCGC GGTCCATGGCAAGCCCAAGGCTAACCCGAGTTGTTCGTCGC < 41bp 0.772914693460014 0.550651395597061 0.5251209 0.41313922 prediction 0.444526595725905 Functional Loss - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380156 chr12:105380159 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_80276 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:105380157-105380203
64251 chr22 29445339 29445339 1 + C T STAD 29445337 + 29445317 29445357 41 CGAGGACAAGCATGGACTCCCACGGCAACCCCGTCACCTTG CGAGGACAAGCATGGACTCCCATGGCAACCCCGTCACCTTG < 41bp 0.722263237131809 0.455750178030222 0.3197313 0.31763536 prediction 0.444526474263618 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445337 chr22:29445339 synonymous SNV . 0 23 hm5C_associated_SNPs_80277 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:29445326-29445354
64251 chr9 132997259 132997259 1 + G A rs112803517 132997256 + 132997236 132997276 41 CTCAGCAAGCAGGCCTCCAGCCCGAGGAAGGCCTCTGCCGT CTCAGCAAGCAGGCCTCCAGCCCAAGGAAGGCCTCTGCCGT < 41bp 0.778509078416943 0.55625018405251 0.35728502 0.23292366 prediction 0.444517788728866 Functional Loss - NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132997256 chr9:132997259 . . 0 24 hm5C_associated_SNPs_80279 0 0 1 UPF1 POSTAR2 ENCODE chr9:132997232-132997283
64251 chr17 37884302 37884302 1 + G A rs2230700 37884299 + 37884279 37884319 41 TCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGCAGA TCTGGACGTGCCAGTGTGAACCAAAAGGCCAAGTCCGCAGA < 41bp 0.756049256176759 0.53379198739113 0.44121814 0.103511155 prediction 0.444514537571258 Functional Loss - ERBB2 ENSG00000141736 UTR3 Human protein_coding chr17:37884299 chr17:37884302 . . 0 24 hm5C_associated_SNPs_80281 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37884294-37884305
64251 chr1 161719669 161719669 1 + G T UCEC 161719667 + 161719647 161719687 41 GCAGAGTCAGCTGTGCCGGGCAGATGCTGGAAGTGCAGCCA GCAGAGTCAGCTGTGCCGGGCATATGCTGGAAGTGCAGCCA < 41bp 0.722246872592477 0.363200068189674 0.899786 0.7126718 prediction 0.444493745184954 Functional Loss - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719667 chr1:161719669 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_80286 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:161719669-161719695
64251 chr15 59102523 59102523 1 + C T LIHC 59102520 + 59102500 59102540 41 TGTTCGAGTGTTTGAATATACACCAGAATGCATAGTATTTG TGTTCGAGTGTTTGAATATACACTAGAATGCATAGTATTTG < 41bp 0.745656127163823 0.523410468864304 0.008989543 0.022815794 prediction 0.444491316599038 Functional Loss - MINDY2 ENSG00000128923 CDS Human protein_coding chr15:59102520 chr15:59102523 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_80289 0 0 3 AARS POSTAR2 ENCODE chr15:59102451-59102535
64251 chr2 27262916 27262916 1 + G T LUAD 27262914 + 27262894 27262934 41 ACAGCTGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCAC ACAGCTGGCTGGGGGAGACACTTCCGCTCTGGGGCTCCCAC < 41bp 0.722241862918163 0.362458321558013 0.8437797 0.38907123 prediction 0.444483725836326 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27262914 chr2:27262916 synonymous SNV . 0 23 hm5C_associated_SNPs_80293 0 0 7 EFTUD2 POSTAR2 ENCODE chr2:27262896-27262937
64251 chr20 46276031 46276031 1 + G A SKCM 46276028 + 46276008 46276048 41 TCCTCTCCAAGGAATGCACCCACGAGCCAACATCATGAGAC TCCTCTCCAAGGAATGCACCCACAAGCCAACATCATGAGAC < 41bp 0.738537844695114 0.516298694316109 0.026995957 0.021534145 prediction 0.444478300758011 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46276028 chr20:46276031 nonsynonymous SNV 0.039 4 24 hm5C_associated_SNPs_80295 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr20:46276002-46276031
64251 chr11 70208417 70208417 1 + G A UCEC 70208414 + 70208394 70208434 41 CTCTGGGTTGGGATGCCAGCCTGGTATGTGGCTGCCTGCCG CTCTGGGTTGGGATGCCAGCCTGATATGTGGCTGCCTGCCG < 41bp 0.785986967907259 0.563747889593137 0.35747862 0.29267293 prediction 0.444478156628244 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70208414 chr11:70208417 stopgain 1.000 1 24 hm5C_associated_SNPs_80296 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70208394-70208417
64251 chr7 150069098 150069098 1 + C T UCEC 150069096 + 150069076 150069116 41 CCAACTTGATCGCTCACCGCCGCGTGCACACGGGCGAGCGG CCAACTTGATCGCTCACCGCCGTGTGCACACGGGCGAGCGG < 41bp 0.78103179528689 0.558794284363661 0.2763193 0.4604066 prediction 0.444475021846458 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069096 chr7:150069098 synonymous SNV . 0 23 hm5C_associated_SNPs_80297 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:150069080-150069100
64251 chr4 134073901 134073901 1 + C T LUSC 134073899 + 134073879 134073919 41 GACCAGCAGCCTGATATCATCTCCAACGGAAGCATTTTGTC GACCAGCAGCCTGATATCATCTTCAACGGAAGCATTTTGTC < 41bp 0.722224431545451 0.435327472404652 0.9600227 0.18493053 prediction 0.444448863090901 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134073899 chr4:134073901 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_80300 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:134073900-134073920
64251 chr2 172822981 172822981 1 + C T LUAD 172822978 + 172822958 172822998 41 ACGCTCTTTGCGACCGTAGGCTACATGACAGTCTATAATTA ACGCTCTTTGCGACCGTAGGCTATATGACAGTCTATAATTA < 41bp 0.740975784425487 0.518754467729936 0.11572477 0.10734677 prediction 0.444442633391101 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172822978 chr2:172822981 synonymous SNV . 0 24 hm5C_associated_SNPs_80304 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr2:172822960-172822997
64251 chr15 50474763 50474763 1 + G C UCEC 50474759 + 50474739 50474779 41 GTGGGCCGGAGGGTGCGCAGCTACGGGAAGCGGCGGCCGGC GTGGGCCGGAGGGTGCGCAGCTACCGGAAGCGGCGGCCGGC < 41bp 0.869471009401979 0.647251733803371 0.21499163 0.21594527 prediction 0.444438551197214 Functional Loss - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50474759 chr15:50474763 nonsynonymous SNV 0.042 0 25 hm5C_associated_SNPs_80308 0 0 2 RPS3 POSTAR2 ENCODE chr15:50474719-50474788
64251 chr8 145135457 145135457 1 + G A COAD 145135454 + 145135434 145135474 41 ATGTGCACACCCTCTTAGATCGAGTGGTCCGGCAGCATGTG ATGTGCACACCCTCTTAGATCGAATGGTCCGGCAGCATGTG < 41bp 0.788149488279278 0.565931455431322 0.6269855 0.24344945 prediction 0.444436065695912 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135454 chr8:145135457 nonsynonymous SNV 0.087 1 24 hm5C_associated_SNPs_80310 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr8:145135441-145135478
64251 chr6 10728939 10728939 1 + C T CESC 10728936 + 10728916 10728956 41 CCACTCTGGAAAATTCATGCCTGCAGGTTTAATTGCAGGTG CCACTCTGGAAAATTCATGCCTGTAGGTTTAATTGCAGGTG < 41bp 0.722215208318335 0.499315156125917 0.31232613 0.28684247 prediction 0.444430416636669 Functional Loss - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10728936 chr6:10728939 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_80312 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:10728920-10728940
64251 chr19 18499253 18499253 1 + C T CESC 18499251 + 18499231 18499271 41 CACGACCGCTGCGGCGTCAGCTCAGCCTTGCAAGACCCCAG CACGACCGCTGCGGCGTCAGCTTAGCCTTGCAAGACCCCAG < 41bp 0.767688474796641 0.545488560422856 0.3510939 0.35692555 prediction 0.444399828747571 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499251 chr19:18499253 synonymous SNV . 0 23 hm5C_associated_SNPs_80319 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:18499246-18499295
64251 chr19 35506708 35506708 1 + C T rs115272678 35506706 + 35506686 35506726 41 GAGTGGAGGCAGTCATCATCCTCGGCTCTCCTCTGTCTCCA GAGTGGAGGCAGTCATCATCCTTGGCTCTCCTCTGTCTCCA < 41bp 0.773142068354441 0.550942690088972 0.1716434 0.14024085 prediction 0.444398756530937 Functional Loss - GRAMD1A ENSG00000271032 ncRNA_intronic Human antisense chr19:35506706 chr19:35506708 . . 0 23 hm5C_associated_SNPs_80320 0 0 4 SF3A3 POSTAR2 ENCODE chr19:35506670-35506766
64251 chr1 161134932 161134932 1 + C T BLCA 161134930 + 161134910 161134950 41 TTGGCATGTCTACAATGACTCTCGGTGAGAATAGCCTCCTA TTGGCATGTCTACAATGACTCTTGGTGAGAATAGCCTCCTA < 41bp 0.829274731845767 0.6070788359356 0.22760355 0.36700436 prediction 0.444391791820334 Functional Loss - USP21 ENSG00000143258 CDS Human protein_coding chr1:161134930 chr1:161134932 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_80324 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:161134923-161134946
64251 chr14 37641838 37641838 1 + A C rs111430783 37641837 + 37641817 37641857 41 CGGATGGGTTTGGGTTGGCTCACCGCAGCGGCTCAGGCTTT CGGATGGGTTTGGGTTGGCTCCCCGCAGCGGCTCAGGCTTT < 41bp 0.796999443054838 0.574803934274373 0.13232961 0.097066045 prediction 0.44439101756093 Functional Loss - SLC25A21-AS1 ENSG00000258708 CDS Human antisense chr14:37641837 chr14:37641838 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_80325 0 0 4 RBM15 POSTAR2 ENCODE chr14:37641815-37641939
64251 chr17 1680805 1680805 1 + C T rs184188298 1680803 + 1680783 1680823 41 GGACAGCAGATTCCACAGGACACGAAGGCTGCCCCTGTAAG GGACAGCAGATTCCACAGGACATGAAGGCTGCCCCTGTAAG < 41bp 0.758306803276399 0.536122047720064 0.10660219 0.10483268 prediction 0.44436951111267 Functional Loss - SERPINF1 ENSG00000132386 UTR3 Human protein_coding chr17:1680803 chr17:1680805 . . 0 23 hm5C_associated_SNPs_80331 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:1680772-1680832
64251 chr1 182827280 182827280 1 + G T UCEC 182827278 + 182827258 182827298 41 TGGATCAAATAAGAAATTGGCAGCACAGTCCTGTGCCCTGT TGGATCAAATAAGAAATTGGCATCACAGTCCTGTGCCCTGT < 41bp 0.722177496815103 0.383730775333199 0.14005065 0.037805617 prediction 0.444354993630206 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827278 chr1:182827280 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_80337 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:182827228-182827283
64251 chr16 67578667 67578667 1 + C T PAAD 67578665 + 67578645 67578685 41 GGAGCGGCTGCTGCGGGAAGCCCGAGTACTGGAGGCAGTAT GGAGCGGCTGCTGCGGGAAGCCTGAGTACTGGAGGCAGTAT < 41bp 0.722172812961318 0.459601719083312 0.8114115 0.29666185 prediction 0.444345625922635 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578665 chr16:67578667 stopgain 0.480 0 23 hm5C_associated_SNPs_80344 0 0 1 PPIG POSTAR2 ENCODE chr16:67578663-67578726
64251 chr16 67578668 67578668 1 + G A UCEC 67578665 + 67578645 67578685 41 GGAGCGGCTGCTGCGGGAAGCCCGAGTACTGGAGGCAGTAT GGAGCGGCTGCTGCGGGAAGCCCAAGTACTGGAGGCAGTAT < 41bp 0.722172812961318 0.481952413631999 0.8114115 0.7992574 prediction 0.444345625922635 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578665 chr16:67578668 nonsynonymous SNV 0.462 0 24 hm5C_associated_SNPs_80345 0 0 1 PPIG POSTAR2 ENCODE chr16:67578663-67578726
64251 chrX 155119158 155119158 1 + G T LUAD 155119156 + 155119136 155119176 41 ATTCTTTTTGCTGTTGTTGCCAGGGGGACCACTATCCTTGC ATTCTTTTTGCTGTTGTTGCCATGGGGACCACTATCCTTGC < 41bp 0.894901719500562 0.672733578916255 0.9313486 0.83448696 prediction 0.444336281168614 Functional Loss - VAMP7 ENSG00000124333 CDS Human protein_coding chrX:155119156 chrX:155119158 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_80349 0 0 3 DDX3X POSTAR2 ENCODE chrX:155119134-155119245
64251 chr19 49507653 49507653 1 + G A BRCA 49507650 + 49507630 49507670 41 CTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGC CTTATTGCTGGCCAGCCGGGCACAGGGAAGACGGCCATCGC < 41bp 0.79172788731418 0.569560527330288 0.85444343 0.6162771 prediction 0.444334719967783 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49507650 chr19:49507653 synonymous SNV . 0 24 hm5C_associated_SNPs_80351 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49507627-49507653
64251 chr8 42146205 42146205 1 + G A UCEC 42146202 + 42146182 42146222 41 TGCCGGCAGGAGCTCAGCCCCCGGAACCGAGAGCGGTGGTG TGCCGGCAGGAGCTCAGCCCCCGAAACCGAGAGCGGTGGTG < 41bp 0.748361596343582 0.526195824615076 0.48619983 0.29252967 prediction 0.444331543457012 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42146202 chr8:42146205 synonymous SNV . 0 24 hm5C_associated_SNPs_80352 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:42146196-42146225
64251 chr7 106509033 106509033 1 + G T UCEC 106509030 + 106509010 106509050 41 ACCATGAGCAGCTTACCATCCACGGCAAGGACCACGAGAGT ACCATGAGCAGCTTACCATCCACTGCAAGGACCACGAGAGT < 41bp 0.722164322861084 0.319062278370371 0.17601731 0.072075665 prediction 0.444328645722168 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509030 chr7:106509033 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_80354 0 0 1 FMR1 POSTAR2 ENCODE chr7:106509031-106509074
64251 chr11 66264855 66264855 1 + C T SKCM 66264852 + 66264832 66264872 41 ACCATCACTCCCACCACAGGCTCCGATGGGCGCCCAGATGC ACCATCACTCCCACCACAGGCTCTGATGGGCGCCCAGATGC < 41bp 0.724442399064666 0.502279162603246 0.22563818 0.20409435 prediction 0.444326472922839 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66264852 chr11:66264855 synonymous SNV . 0 24 hm5C_associated_SNPs_80355 0 0 1 RPS3 POSTAR2 ENCODE chr11:66264827-66264866
64251 chr19 17836868 17836868 1 + G T SARC 17836865 + 17836845 17836885 41 CTGGAGCCACCGTCCCCCTTCGAGCTGCTGGAGCCCCCGAC CTGGAGCCACCGTCCCCCTTCGATCTGCTGGAGCCCCCGAC < 41bp 0.722161862897923 0.322385655959854 0.9267429 0.85553825 prediction 0.444323725795845 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836865 chr19:17836868 nonsynonymous SNV 0.155 0 24 hm5C_associated_SNPs_80356 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr6 37445388 37445388 1 + T C STAD 37445387 + 37445367 37445407 41 GGGTGAAGGAGGTGTACAGACTGGAAGAGATGGAGAAGATT GGGTGAAGGAGGTGTACAGACCGGAAGAGATGGAGAAGATT < 41bp 0.813756091042708 0.591595286521299 0.34638774 0.4327523 prediction 0.444321609042817 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37445387 chr6:37445388 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_80358 0 0 4 DDX24 POSTAR2 ENCODE chr6:37445366-37445401
64251 chr7 66236946 66236946 1 + G A CESC 66236943 + 66236923 66236963 41 GATCAATCGGATCTCCTGTGCAAGAAAGGATGTGGTTACTA GATCAATCGGATCTCCTGTGCAAAAAAGGATGTGGTTACTA < 41bp 0.754828131982837 0.532680223407747 0.3839396 0.2630588 prediction 0.444295817150181 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66236943 chr7:66236946 synonymous SNV . 0 24 hm5C_associated_SNPs_80369 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:66236902-66236946
64251 chr11 61897799 61897799 1 + G A rs36067669 61897796 + 61897776 61897816 41 TGCGCAGGTCTCCCCTGGCCCACGGGACTCGCCAGCCTTTC TGCGCAGGTCTCCCCTGGCCCACAGGACTCGCCAGCCTTTC < 41bp 0.817060829320883 0.59491394999015 0.45465583 0.1738007 prediction 0.444293758661466 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897796 chr11:61897799 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_80370 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr11:61897773-61897801
64251 chrX 70444255 70444255 1 + C T COAD 70444253 + 70444233 70444273 41 AATCCACCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCT AATCCACCTTCCCGCAAGGGCTTGGGCTTCGGCCACCGCCT < 41bp 0.805688382402433 0.583546001840191 0.06601879 0.07954219 prediction 0.444284761124484 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444253 chrX:70444255 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_80372 0 0 3 RPS3 POSTAR2 ENCODE chrX:70444229-70444271
64251 chr1 6694597 6694597 1 - C A COAD 6694599 - 6694579 6694619 41 CCCTCGGAGCAAGCGCCGCACAGGTGGTGGCTGAGACAGCT CCCTCGGAGCAAGCGCCGCACATGTGGTGGCTGAGACAGCT < 41bp 0.875221820924248 0.653086915614285 0.55747414 0.14581904 prediction 0.444269810619928 Functional Loss - DNAJC11;THAP3 ENSG00000007923 CDS Human protein_coding chr1:6694599 chr1:6694597 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_80377 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:6694586-6694606
64251 chr15 40700156 40700156 1 + G A STAD 40700153 + 40700133 40700173 41 GGCAGGAATTTTGGAAGCAGCTGGGGAACCTGGGCGTATTG GGCAGGAATTTTGGAAGCAGCTGAGGAACCTGGGCGTATTG < 41bp 0.79505174913744 0.57292900265202 0.8983271 0.8904258 prediction 0.444245492970839 Functional Loss - IVD ENSG00000128928 CDS Human protein_coding chr15:40700153 chr15:40700156 nonsynonymous SNV 0.938 5 24 hm5C_associated_SNPs_80386 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:40700140-40700160
64251 chr12 8245509 8245509 1 + T C STAD 8245508 + 8245488 8245528 41 AGGTGCTTCTAAGCCCAGGACTGCAAGGGGTGGGGGTCTGA AGGTGCTTCTAAGCCCAGGACCGCAAGGGGTGGGGGTCTGA < 41bp 0.840253462708753 0.618134337711595 0.33777016 0.23311237 prediction 0.444238249994315 Functional Loss - NECAP1 ENSG00000089818 CDS Human protein_coding chr12:8245508 chr12:8245509 synonymous SNV . 0 22 hm5C_associated_SNPs_80387 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:8245500-8245520
64251 chr10 103900555 103900555 1 + C T SKCM 103900552 + 103900532 103900572 41 ACCGGCGACGAAGGCAGCAACGCCAAGCAGAAACAGAAGAG ACCGGCGACGAAGGCAGCAACGCTAAGCAGAAACAGAAGAG < 41bp 0.750954030647235 0.52883552360243 0.2231819 0.20678031 prediction 0.444237014089609 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900552 chr10:103900555 stopgain 0.999 0 24 hm5C_associated_SNPs_80389 0 0 2 EIF3H POSTAR2 ENCODE chr10:103900551-103900640
64251 chr11 110036074 110036074 1 + G A LUAD 110036071 + 110036051 110036091 41 AATAGACAGCATCTCTGACTCTCGACTTTATGACAGTTCTC AATAGACAGCATCTCTGACTCTCAACTTTATGACAGTTCTC < 41bp 0.749954586789764 0.527840068701787 0.6606888 0.26143193 prediction 0.444229036175954 Functional Loss - ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110036071 chr11:110036074 nonsynonymous SNV 0.062 3 24 hm5C_associated_SNPs_80391 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr11:110036059-110036080
64251 chr6 151670172 151670172 1 + A C rs3734799 151670171 + 151670151 151670191 41 GCAGCAGGGGCTGGCGACCACAAGGACCCCAGCCTTGGGGC GCAGCAGGGGCTGGCGACCACCAGGACCCCAGCCTTGGGGC < 41bp 0.809389931232689 0.587276773799009 0.8090696 0.7069865 prediction 0.44422631486736 Functional Loss - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670171 chr6:151670172 nonsynonymous SNV 0.023 0 22 hm5C_associated_SNPs_80393 0 1 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:151670172-151670173
64251 chr10 82187220 82187220 1 + G A LUSC 82187217 + 82187197 82187237 41 TGGAAGGAGAAGGCTTCATCCTTGGGGGAGTTTTCGTGGTG TGGAAGGAGAAGGCTTCATCCTTAGGGGAGTTTTCGTGGTG < 41bp 0.785988675014521 0.563894964319992 0.08274475 0.029358566 prediction 0.444187421389058 Functional Loss - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82187217 chr10:82187220 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_80398 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:82187206-82187245
64251 chr6 43488713 43488713 1 + C T LUAD 43488710 + 43488690 43488730 41 GCCAACCCCCGGCTGGATACCTTCAGCAGAGAAATCTTCCG GCCAACCCCCGGCTGGATACCTTTAGCAGAGAAATCTTCCG < 41bp 0.734424613824885 0.51233607704941 0.07499468 0.030520499 prediction 0.444177073550949 Functional Loss - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488710 chr6:43488713 synonymous SNV . 0 24 hm5C_associated_SNPs_80400 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:43488683-43488721
64251 chr19 44610799 44610799 1 - C G OV 44610803 - 44610783 44610823 41 GTGTAATTGTTGATGAAAATCAAAGTGGGAGACATCACTGA GTGTAATTGTTGATGAAAATCAAACTGGGAGACATCACTGA < 41bp 0.722083473174164 0.440759392309748 0.7319144 0.34797934 prediction 0.444166946348328 Functional Loss - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610803 chr19:44610799 nonsynonymous SNV 0.023 0 25 hm5C_associated_SNPs_80406 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:44610783-44610808
64251 chr11 60617942 60617942 1 + G A rs493176 60617939 + 60617919 60617959 41 CCCCACCCCGACCGGGGCTCCTCGGCCTTTGAAGGCTTCCA CCCCACCCCGACCGGGGCTCCTCAGCCTTTGAAGGCTTCCA < 41bp 0.750425179748848 0.528342982402886 0.2435888 0.16108072 prediction 0.444164394691925 Functional Loss - CCDC86 ENSG00000256813 ncRNA_intronic Human antisense chr11:60617939 chr11:60617942 . . 0 24 hm5C_associated_SNPs_80407 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:60617910-60617960
64251 chr13 52605825 52605825 1 + A T rs565738138 52605821 + 52605801 52605841 41 ATCCACAGGGTATCTATTACCAGCATAATGCATTGTAAGAT ATCCACAGGGTATCTATTACCAGCTTAATGCATTGTAAGAT < 41bp 0.722082070002416 0.425084798387031 0.29494762 0.77900684 prediction 0.444164140004832 Functional Loss - UTP14C ENSG00000253797 UTR3 Human protein_coding chr13:52605821 chr13:52605825 . . 0 25 hm5C_associated_SNPs_80408 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr13:52605817-52605847
64251 chr20 4163027 4163027 1 + C T UCEC 4163025 + 4163005 4163045 41 TGGCCAGGGTGGAGAGGAGCCCCGGGGGGGCAGGTGGGATG TGGCCAGGGTGGAGAGGAGCCCTGGGGGGGCAGGTGGGATG < 41bp 0.72207665427292 0.460435385267158 0.8687813 0.85121727 prediction 0.44415330854584 Functional Loss - SMOX ENSG00000088826 CDS Human protein_coding chr20:4163025 chr20:4163027 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_80410 0 0 5 DDX55 POSTAR2 ENCODE chr20:4162998-4163047
64251 chr2 47703631 47703631 1 + C T COAD 47703629 + 47703609 47703649 41 CATTGTGGACTGCATCTTAGCCCGAGTAGGGGCTGGTGACA CATTGTGGACTGCATCTTAGCCTGAGTAGGGGCTGGTGACA < 41bp 0.722075153371679 0.424572100859235 0.12221694 0.11942962 prediction 0.444150306743358 Functional Loss - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47703629 chr2:47703631 stopgain 0.898 1 23 hm5C_associated_SNPs_80412 3 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:47703592-47703634
64251 chr9 132637007 132637007 1 + G A BLCA 132637004 + 132636984 132637024 41 ATCACCACCTACGACCTCCTCTCGGTCATCTGCCACCACGG ATCACCACCTACGACCTCCTCTCAGTCATCTGCCACCACGG < 41bp 0.722072686923327 0.465492168167668 0.28730577 0.056670934 prediction 0.444145373846654 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132637004 chr9:132637007 synonymous SNV . 0 24 hm5C_associated_SNPs_80413 0 0 1 BUD13 POSTAR2 ENCODE chr9:132636994-132637017
64251 chr9 132637006 132637006 1 + C T BLCA 132637004 + 132636984 132637024 41 ATCACCACCTACGACCTCCTCTCGGTCATCTGCCACCACGG ATCACCACCTACGACCTCCTCTTGGTCATCTGCCACCACGG < 41bp 0.722072686923327 0.448970917953877 0.28730577 0.10404459 prediction 0.444145373846654 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132637004 chr9:132637006 nonsynonymous SNV 0.765 2 23 hm5C_associated_SNPs_80414 0 0 1 BUD13 POSTAR2 ENCODE chr9:132636994-132637017
64251 chr16 85689517 85689517 1 + C T BLCA 85689515 + 85689495 85689535 41 GAGCGCATGTCTGGCCTCAGCGCGGAGAGGTAAGTGCGTCT GAGCGCATGTCTGGCCTCAGCGTGGAGAGGTAAGTGCGTCT < 41bp 0.809015557367227 0.586943073663896 0.8798058 0.8431028 prediction 0.444144967406662 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689515 chr16:85689517 nonsynonymous SNV 0.079 2 23 hm5C_associated_SNPs_80415 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:85689506-85689592
64251 chr19 7976212 7976212 1 + G A DLBC 7976209 + 7976189 7976229 41 GACGTATGGAGCCTGGGCATCTCGTTGGTGAGTTGGGGCCC GACGTATGGAGCCTGGGCATCTCATTGGTGAGTTGGGGCCC < 41bp 0.78258123255151 0.560519729238254 0.23640326 0.25192225 prediction 0.444123006626513 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976209 chr19:7976212 synonymous SNV . 0 24 hm5C_associated_SNPs_80420 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:7976192-7976212
64251 chr1 249211007 249211007 1 + T C CHOL 249211006 + 249210986 249211026 41 CTCACCTACCTGGCAGTGTGCTGCATGCTTCAGTCCTGTGT CTCACCTACCTGGCAGTGTGCCGCATGCTTCAGTCCTGTGT < 41bp 0.804296508575661 0.582237392795352 0.2903385 0.7530483 prediction 0.444118231560618 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211006 chr1:249211007 nonsynonymous SNV 0.372 3 22 hm5C_associated_SNPs_80421 0 0 4 RBM15 POSTAR2 ENCODE chr1:249211003-249211082
64251 chr20 48600529 48600529 1 + G T UCEC 48600526 + 48600506 48600546 41 CCTTCGGCTCCAGGAGAGTCCCAGGGTGGCAGAGCTGACCT CCTTCGGCTCCAGGAGAGTCCCATGGTGGCAGAGCTGACCT < 41bp 0.722055961711234 0.311098222170658 0.89816946 0.34755832 prediction 0.444111923422467 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600526 chr20:48600529 nonsynonymous SNV 0.151 0 24 hm5C_associated_SNPs_80424 0 0 2 RBM15 POSTAR2 ENCODE chr20:48600497-48600552
64251 chr10 72633155 72633155 1 + G A CESC 72633152 + 72633132 72633172 41 TCATTGGTGTTGTATAGTGACAAGAAGTACAGGAACTATCA TCATTGGTGTTGTATAGTGACAAAAAGTACAGGAACTATCA < 41bp 0.722054977228897 0.492402599226582 0.17131251 0.045170248 prediction 0.444109954457794 Functional Loss - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72633152 chr10:72633155 synonymous SNV . 0 24 hm5C_associated_SNPs_80426 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:72633127-72633155
64251 chr6 1395184 1395184 1 + G A rs115416648 1395181 + 1395161 1395201 41 GGACGGATTCAAGTCACATGCACGCGGATAGCAGTAAGCCA GGACGGATTCAAGTCACATGCACACGGATAGCAGTAAGCCA < 41bp 0.722049238358067 0.497132076886684 0.2943703 0.07900661 prediction 0.444098476716135 Functional Loss - FOXF2 ENSG00000137273 UTR3 Human protein_coding chr6:1395181 chr6:1395184 . . 0 24 hm5C_associated_SNPs_80432 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:1395166-1395184
64251 chr1 150477145 150477145 1 + C T LUAD 150477142 + 150477122 150477162 41 TGGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGGTTCT TGGAGCGTCCAGTCCTCATTCACTGAGCAGTGCTCGGTTCT < 41bp 0.733077536325264 0.511040006668613 0.4971736 0.4006113 prediction 0.444075059313301 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150477142 chr1:150477145 stopgain 0.994 1 24 hm5C_associated_SNPs_80439 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:150477126-150477161
64251 chr13 113773961 113773961 1 + G A rs3093250 113773958 + 113773938 113773978 41 TGCACGCACACATCAGTGCACACGGATGCACAGAGATATGC TGCACGCACACATCAGTGCACACAGATGCACAGAGATATGC < 41bp 0.722036331805882 0.478923839727421 0.09789163 0.05074969 prediction 0.444072663611763 Functional Loss - F7 ENSG00000057593 UTR3 Human protein_coding chr13:113773958 chr13:113773961 . . 0 24 hm5C_associated_SNPs_80440 2 0 5 AGGF1 POSTAR2 ENCODE chr13:113773892-113773976
64251 chr16 3526287 3526287 1 + C T rs543443643 3526285 + 3526265 3526305 41 TCAGCCTGCGCCTCCTCTGCCACGATGACATAGACACTGTG TCAGCCTGCGCCTCCTCTGCCATGATGACATAGACACTGTG < 41bp 0.834913467535333 0.612880401158232 0.41613632 0.3616226 prediction 0.444066132754201 Functional Loss - NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3526285 chr16:3526287 synonymous SNV . 0 23 hm5C_associated_SNPs_80442 0 0 3 DDX3X POSTAR2 ENCODE chr16:3526221-3526302
64251 chr12 7015029 7015029 1 + G A UCEC 7015026 + 7015006 7015046 41 CAGTGGCTGCCCACCCCCCTCACGGAGGACATGATGAAGGA CAGTGGCTGCCCACCCCCCTCACAGAGGACATGATGAAGGA < 41bp 0.780509785936518 0.558479651703373 0.34224558 0.10170293 prediction 0.444060268466291 Functional Loss - LRRC23 ENSG00000010626 CDS Human protein_coding chr12:7015026 chr12:7015029 synonymous SNV . 0 24 hm5C_associated_SNPs_80444 0 0 1 DDX6 POSTAR2 ENCODE chr12:7014989-7015030
64251 chr15 75185540 75185540 1 + G A LUAD 75185537 + 75185517 75185557 41 GCAACACACCTGAAGCAGACCATGAGCCATGACTCCCAGGC GCAACACACCTGAAGCAGACCATAAGCCATGACTCCCAGGC < 41bp 0.722024379121532 0.477848584490017 0.12451267 0.10365084 prediction 0.444048758243063 Functional Loss - MPI ENSG00000178802 CDS Human protein_coding chr15:75185537 chr15:75185540 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_80448 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:75185540-75185560
64251 chr20 60963388 60963388 1 + C T BRCA 60963386 + 60963366 60963406 41 GTGAGTCAGATGATTCCATTCTCCGATTGGCCAAGGCCGAT GTGAGTCAGATGATTCCATTCTTCGATTGGCCAAGGCCGAT < 41bp 0.722020721514729 0.473930351350377 0.112280935 0.061510235 prediction 0.444041443029458 Functional Loss - RPS21 ENSG00000171858 CDS Human protein_coding chr20:60963386 chr20:60963388 synonymous SNV . 0 23 hm5C_associated_SNPs_80449 0 0 60 TARDBP POSTAR2 DRA001158,DRS012386 chr20:60963348-60963417
64251 chr10 99330225 99330225 1 + A C LUSC 99330224 + 99330204 99330244 41 GGCTCCAGGAGACCAAGATCCAGAAAGATTTTGTCATCCAG GGCTCCAGGAGACCAAGATCCCGAAAGATTTTGTCATCCAG < 41bp 0.722018938674845 0.4654630896412 0.07710418 0.07653099 prediction 0.444037877349691 Functional Loss - UBTD1 ENSG00000165886 CDS Human protein_coding chr10:99330224 chr10:99330225 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_80451 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr10:99330220-99330240
64251 chr19 18684198 18684198 1 + A T STAD 18684194 + 18684174 18684214 41 ACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGG ACCATTGAGAATGTCAAAGCCAAATTTCAAGACAAGGAGGG < 41bp 0.722015392000912 0.388782483231677 0.29184067 0.07242334 prediction 0.444030784001823 Functional Loss - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18684194 chr19:18684198 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_80455 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:18684108-18684214
64251 chr16 12136854 12136854 1 + C T rs535962563 12136852 + 12136832 12136872 41 CCTCAGACGTGGGCCGGGGTCGCGCCTGGCTGCGCTGTGCC CCTCAGACGTGGGCCGGGGTCGTGCCTGGCTGCGCTGTGCC < 41bp 0.722013592400487 0.459327891106644 0.47306553 0.3536815 prediction 0.444027184800974 Functional Loss - SNX29 ENSG00000048471 CDS Human protein_coding chr16:12136852 chr16:12136854 synonymous SNV . 0 23 hm5C_associated_SNPs_80458 0 0 4 DDX24 POSTAR2 ENCODE chr16:12136794-12136857
64251 chr3 44666593 44666593 1 + G C rs535412882 44666592 + 44666572 44666612 41 ATCTCCTAGCGGCCTGGCGCCGAGGCGGCGGTACGCAAGGC ATCTCCTAGCGGCCTGGCGCCCAGGCGGCGGTACGCAAGGC < 41bp 0.842589139854128 0.620583006309589 0.8726164 0.49446467 prediction 0.444012267089078 Functional Loss - ZNF197 ENSG00000236869 ncRNA_intronic Human antisense chr3:44666592 chr3:44666593 . . 0 22 hm5C_associated_SNPs_80467 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:44666583-44666606
64251 chr9 91963111 91963111 1 + G A HNSC 91963108 + 91963088 91963128 41 GTGGTGGTGATGACCAGTTTCCCGAGCAGGCAGAGCTGTCA GTGGTGGTGATGACCAGTTTCCCAAGCAGGCAGAGCTGTCA < 41bp 0.778914928690592 0.55691111368163 0.37769833 0.15255713 prediction 0.444007630017923 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91963108 chr9:91963111 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_80469 0 0 6 BUD13 POSTAR2 ENCODE chr9:91963075-91963140
64251 chr13 98009806 98009806 1 + C T STAD 98009804 + 98009784 98009824 41 GAAAAAAGCAATGGTACCAGCGCGGTCTTTAACCCCAGCGT GAAAAAAGCAATGGTACCAGCGTGGTCTTTAACCCCAGCGT < 41bp 0.824785482734088 0.602787007846977 0.7341294 0.612979 prediction 0.443996949774222 Functional Loss - MBNL2 ENSG00000139793 CDS Human protein_coding chr13:98009804 chr13:98009806 nonsynonymous SNV 0.963 1 23 hm5C_associated_SNPs_80472 0 0 2 PPIG POSTAR2 ENCODE chr13:98009791-98009840
64251 chr21 45483519 45483519 1 + G A SKCM 45483516 + 45483496 45483536 41 ATGGAGAAGCGGGAATCGATCCAGAGGCGAGAAGCCACCCT ATGGAGAAGCGGGAATCGATCCAAAGGCGAGAAGCCACCCT < 41bp 0.782631901785384 0.560634230978761 0.8831351 0.41974244 prediction 0.443995341613247 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45483516 chr21:45483519 synonymous SNV . 0 24 hm5C_associated_SNPs_80474 0 0 1 SRSF1 POSTAR2 ENCODE chr21:45483463-45483539
64251 chr1 150054935 150054935 1 + G T UCEC 150054932 + 150054912 150054952 41 TTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCAT TTTCAGAGGTTGAGCAAGAACTGTCCTGTCAAAATGACCAT < 41bp 0.721997242793653 0.333724699256291 0.17510721 0.056100696 prediction 0.443994485587305 Functional Loss - VPS45 ENSG00000136631 CDS Human protein_coding chr1:150054932 chr1:150054935 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80475 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:150054915-150054953
64251 chr10 1205891 1205891 1 + G T UCEC 1205888 + 1205868 1205908 41 ACATGAGGGATGAGGCAGCACAGGAATTGGCACAACCTGAA ACATGAGGGATGAGGCAGCACAGTAATTGGCACAACCTGAA < 41bp 0.909820373128105 0.687832786791268 0.7012973 0.43583703 prediction 0.443975172673674 Functional Loss - LINC00200 ENSG00000229205 ncRNA_exonic Human lincRNA chr10:1205888 chr10:1205891 . . 0 24 hm5C_associated_SNPs_80482 0 0 1 DDX3X POSTAR2 ENCODE chr10:1205864-1205931
64251 chr2 179404295 179404295 1 + G A COAD 179404292 + 179404272 179404312 41 TTTAGGCACTTCTCGTCTCTCGAGGATGTAGCCTAAGATGT TTTAGGCACTTCTCGTCTCTCGAAGATGTAGCCTAAGATGT < 41bp 0.729546689731169 0.507560889671965 0.9206915 0.86189145 prediction 0.443971600118408 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179404292 chr2:179404295 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_80484 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:179404260-179404300
64251 chr19 1042361 1042361 1 + G A UCEC 1042358 + 1042338 1042378 41 CTCCACTGGAACCACCCATGCTGGATGTCGCGGAGCTGCTG CTCCACTGGAACCACCCATGCTGAATGTCGCGGAGCTGCTG < 41bp 0.781254858600209 0.559269062665847 0.52735096 0.65488255 prediction 0.443971591868725 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1042358 chr19:1042361 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_80485 0 0 3 EFTUD2 POSTAR2 ENCODE chr19:1042347-1042392
64251 chr5 7873639 7873639 1 + G A LUSC 7873636 + 7873616 7873656 41 CTCACCTGCGGTATGGGTTACTGGGTAATGGACTCTCTCTT CTCACCTGCGGTATGGGTTACTGAGTAATGGACTCTCTCTT < 41bp 0.721983781249258 0.490523251912192 0.5717143 0.27173826 prediction 0.443967562498516 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7873636 chr5:7873639 nonsynonymous SNV 0.957 4 24 hm5C_associated_SNPs_80486 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:7873611-7873649
64251 chr1 38259872 38259872 1 + C T rs148867601 38259870 + 38259850 38259890 41 CGGCCATGGCCCGGCGGCGGCGCCGCGCCTGCATCGCTCTG CGGCCATGGCCCGGCGGCGGCGTCGCGCCTGCATCGCTCTG < 41bp 0.755313361401439 0.533335404000379 0.3885632 0.32397586 prediction 0.44395591480212 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38259870 chr1:38259872 synonymous SNV . 0 23 hm5C_associated_SNPs_80488 0 0 2 DDX3X POSTAR2 ENCODE chr1:38259775-38259889
64251 chr7 141315310 141315310 1 + G A OV 141315307 + 141315287 141315327 41 TTCCCATTGGATTTATCCCACTGGGAGAGACCAGTAGTTTG TTCCCATTGGATTTATCCCACTGAGAGAGACCAGTAGTTTG < 41bp 0.72197546888227 0.484051707629369 0.12381169 0.116805434 prediction 0.443950937764541 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141315307 chr7:141315310 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_80489 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:141315285-141315313
64251 chr2 37458898 37458898 1 + G A rs72875762 37458895 + 37458875 37458915 41 GGGGCCGTTGTGTGCCGTGGCGCGCGCAGGTAAGCGTCAGT GGGGCCGTTGTGTGCCGTGGCGCACGCAGGTAAGCGTCAGT < 41bp 0.721973129181937 0.480534872468434 0.14575052 0.033151448 prediction 0.443946258363874 Functional Loss - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37458895 chr2:37458898 nonsynonymous SNV 0.006 2 24 hm5C_associated_SNPs_80490 1 0 5 DDX3X POSTAR2 ENCODE chr2:37458802-37458905
64251 chr12 132856573 132856573 1 + G A rs61359649 132856570 + 132856550 132856590 41 AGGTCTCCTGGATCCACTTCCTGGATGCCCAGTGTCTGCCA AGGTCTCCTGGATCCACTTCCTGAATGCCCAGTGTCTGCCA < 41bp 0.77492181046695 0.552949607991995 0.32961535 0.33749497 prediction 0.443944404949909 Functional Loss - LOC100130238 ENSG00000182870 intronic Human protein_coding chr12:132856570 chr12:132856573 . . 0 24 hm5C_associated_SNPs_80491 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:132856565-132856603
64251 chr11 65601469 65601469 1 + G C rs575020734 65601468 + 65601448 65601488 41 TCCTCACTCGGTCAGTTCCTCGGGCGAGTTACGGGGACGAC TCCTCACTCGGTCAGTTCCTCCGGCGAGTTACGGGGACGAC < 41bp 0.850341601712134 0.628372183610514 0.9253316 0.8933871 prediction 0.443938836203242 Functional Loss - SNX32 ENSG00000172803 UTR5 Human protein_coding chr11:65601468 chr11:65601469 . . 0 22 hm5C_associated_SNPs_80494 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr11:65601445-65601469
64251 chr10 121429480 121429480 1 + C T SKCM 121429477 + 121429457 121429497 41 GCTACATTCCCATTCCTGTGCTCCATGAAGGCGCTGAGAAC GCTACATTCCCATTCCTGTGCTCTATGAAGGCGCTGAGAAC < 41bp 0.746525584726678 0.524558869376232 0.8955439 0.6880065 prediction 0.443933430700891 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121429477 chr10:121429480 nonsynonymous SNV 0.951 4 24 hm5C_associated_SNPs_80495 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:121429480-121429481
64251 chr1 11810268 11810268 1 + C T SKCM 11810266 + 11810246 11810286 41 CTGAAGCCAGCCACGCTGCGCCCGGCCCTGCCCCGGGCCTT CTGAAGCCAGCCACGCTGCGCCTGGCCCTGCCCCGGGCCTT < 41bp 0.729908947900161 0.507942559356527 0.4100854 0.3527149 prediction 0.443932777087268 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810266 chr1:11810268 synonymous SNV . 0 23 hm5C_associated_SNPs_80496 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:11810232-11810275
64251 chr9 131246279 131246279 1 + G T LUAD 131246277 + 131246257 131246297 41 AGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA AGTCCATGCGTGGGCATTTGCATGCACAGCTTCGGTCCAAA < 41bp 0.721964153403874 0.383872598955949 0.685538 0.10069153 prediction 0.443928306807748 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131246277 chr9:131246279 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_80501 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131246263-131246281
64251 chr9 131246280 131246280 1 + G A UCEC 131246277 + 131246257 131246297 41 AGTCCATGCGTGGGCATTTGCAGGCACAGCTTCGGTCCAAA AGTCCATGCGTGGGCATTTGCAGACACAGCTTCGGTCCAAA < 41bp 0.721964153403874 0.492226146913996 0.685538 0.24795789 prediction 0.443928306807748 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131246277 chr9:131246280 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_80502 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131246263-131246281
64251 chr2 206659486 206659486 1 + G C LUAD 206659485 + 206659465 206659505 41 TTATGTATCGCAGATGAATACGAGGTGGACTGGAGCAATTC TTATGTATCGCAGATGAATACCAGGTGGACTGGAGCAATTC < 41bp 0.721963167573942 0.400292058160975 0.8956034 0.86863506 prediction 0.443926335147884 Functional Loss - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206659485 chr2:206659486 nonsynonymous SNV 0.627 1 22 hm5C_associated_SNPs_80503 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:206659480-206659513
64251 chr2 7154680 7154680 1 + G T UCEC 7154678 + 7154658 7154698 41 GCCCTAAACAGGGCCACCTACAGGAGAACGAGGCATGTGCA GCCCTAAACAGGGCCACCTACATGAGAACGAGGCATGTGCA < 41bp 0.908305865631787 0.68634445289416 0.9035434 0.42396054 prediction 0.443922825475253 Functional Loss - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7154678 chr2:7154680 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_80504 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:7154648-7154680
64251 chr3 49212314 49212314 1 + G A COAD 49212311 + 49212291 49212331 41 GCTGAAGGCAGCGTCTTTAGCCTGGGTGGCCTGCAGCAGCC GCTGAAGGCAGCGTCTTTAGCCTAGGTGGCCTGCAGCAGCC < 41bp 0.721958229529557 0.47793826575121 0.8601085 0.55252737 prediction 0.443916459059114 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212311 chr3:49212314 synonymous SNV . 0 24 hm5C_associated_SNPs_80506 0 0 2 METAP2 POSTAR2 ENCODE chr3:49212301-49212333
64251 chr6 4892027 4892027 1 + G A rs143201617 4892024 + 4892004 4892044 41 CGGTGGAAAGGCTATGACAGCGAGGACGACACTTGGGAGCC CGGTGGAAAGGCTATGACAGCGAAGACGACACTTGGGAGCC < 41bp 0.721949384001832 0.48468366057721 0.75639045 0.4047913 prediction 0.443898768003664 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892024 chr6:4892027 synonymous SNV . 0 24 hm5C_associated_SNPs_80514 0 0 9 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:4892016-4892037
64251 chr1 151020721 151020721 1 + G A SKCM 151020718 + 151020698 151020738 41 CAGTGCGACTCCCAATACAGCGGGGAGTTCCAGCACGAGGT CAGTGCGACTCCCAATACAGCGGAGAGTTCCAGCACGAGGT < 41bp 0.813803045829045 0.591855547234356 0.8838675 0.33324707 prediction 0.443894997189378 Functional Loss - C1orf56 ENSG00000143443 CDS Human protein_coding chr1:151020718 chr1:151020721 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_80516 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:151020718-151020744
64251 chr6 21596142 21596142 1 + G T LUAD 21596139 + 21596119 21596159 41 CCCGAGGTGAGCGAGATGATCTCGGGAGACTGGCTCGAGTC CCCGAGGTGAGCGAGATGATCTCTGGAGACTGGCTCGAGTC < 41bp 0.906087121163877 0.684142368111563 0.48898268 0.21743408 prediction 0.443889506104628 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21596139 chr6:21596142 synonymous SNV . 0 24 hm5C_associated_SNPs_80521 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:21596094-21596148
64251 chr19 45157261 45157261 1 + G A SKCM 45157258 + 45157238 45157278 41 CCTGCGATGCTCGCAGCAACCCAGAGCCCACAGGCTATAAT CCTGCGATGCTCGCAGCAACCCAAAGCCCACAGGCTATAAT < 41bp 0.776833782665581 0.554894678263684 0.3674957 0.29920536 prediction 0.443878208803794 Functional Loss - PVR ENSG00000073008 CDS Human protein_coding chr19:45157258 chr19:45157261 nonsynonymous SNV 0.893 1 24 hm5C_associated_SNPs_80523 0 0 1 GRWD1 POSTAR2 ENCODE chr19:45157220-45157268
64251 chr19 56206137 56206137 1 + G A rs11545669 56206134 + 56206114 56206154 41 AGAGGTGCCGGCCCGAAGCCCTGGGGCGTTTGACATGAGTG AGAGGTGCCGGCCCGAAGCCCTGAGGCGTTTGACATGAGTG < 41bp 0.798755421120484 0.576825511708917 0.5882266 0.34064496 prediction 0.443859818823134 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56206134 chr19:56206137 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_80529 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:56206115-56206154
64251 chr19 16319885 16319885 1 + G A UCEC 16319882 + 16319862 16319902 41 CAAGCTGGAAACAGGGGCCCCGCGGCCACCAGCCACCGTCA CAAGCTGGAAACAGGGGCCCCGCAGCCACCAGCCACCGTCA < 41bp 0.805428840761549 0.583502705919792 0.8983828 0.5104984 prediction 0.443852269683514 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16319882 chr19:16319885 nonsynonymous SNV 0.623 2 24 hm5C_associated_SNPs_80531 0 0 4 BUD13 POSTAR2 ENCODE chr19:16319810-16319910
64251 chr11 34988343 34988343 1 + T C rs61760973 34988342 + 34988322 34988362 41 GATCCCACCAGTATCAACTCCTGGACAACCCAATGCAGTGG GATCCCACCAGTATCAACTCCCGGACAACCCAATGCAGTGG < 41bp 0.721923221920956 0.461773305053881 0.040320754 0.05539909 prediction 0.443846443841911 Functional Loss - PDHX ENSG00000110435 CDS Human protein_coding chr11:34988342 chr11:34988343 synonymous SNV . 0 22 hm5C_associated_SNPs_80533 2 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34988303-34988353
64251 chr16 2283475 2283475 1 + G C rs35508264 2283471 + 2283451 2283491 41 CAGGAGCTCCCCTGCTCCAGCGAGGGCAGCCGTGAGAACCT CAGGAGCTCCCCTGCTCCAGCGAGCGCAGCCGTGAGAACCT < 41bp 0.863728199845642 0.641806808644725 0.9267752 0.78253406 prediction 0.443842782401833 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2283471 chr16:2283475 nonsynonymous SNV 0.042 0 25 hm5C_associated_SNPs_80534 0 0 10 RTCB POSTAR2 GSE38201,GSM936508 chr16:2283471-2283496
64251 chr12 4461510 4461510 1 + G T LUSC 4461507 + 4461487 4461527 41 ATCAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAACTGT ATCAAAAAGAACAGTTTTCCCAATGATCTCCAAGCAACTGT < 41bp 0.721920480074696 0.334927512262444 0.20130786 0.06998661 prediction 0.443840960149392 Functional Loss - TIGAR ENSG00000078237 CDS Human protein_coding chr12:4461507 chr12:4461510 stopgain 0.467 0 24 hm5C_associated_SNPs_80535 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:4461452-4461537
64251 chr16 28596247 28596247 1 + G A UCEC 28596244 + 28596224 28596264 41 TTCCTTACAGGAAGAGCGTTCGCGGAGCGAACACAACTTAG TTCCTTACAGGAAGAGCGTTCGCAGAGCGAACACAACTTAG < 41bp 0.784846186738072 0.562927370607915 0.16106313 0.08221179 prediction 0.443837632260314 Functional Loss - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28596244 chr16:28596247 nonsynonymous SNV 0.418 1 24 hm5C_associated_SNPs_80537 0 0 1 PPIG POSTAR2 ENCODE chr16:28596232-28596260
64251 chr12 6562344 6562344 1 + G A SKCM 6562341 + 6562321 6562361 41 CGCCAGCAGTGAGGACAGGGCAAGGGCCTCCCTTGTGCTGA CGCCAGCAGTGAGGACAGGGCAAAGGCCTCCCTTGTGCTGA < 41bp 0.770424416510761 0.548511418146069 0.62475055 0.20482534 prediction 0.443825996729384 Functional Loss - TAPBPL ENSG00000139192 CDS Human protein_coding chr12:6562341 chr12:6562344 nonsynonymous SNV 0.122 0 24 hm5C_associated_SNPs_80539 0 0 1 PPIG POSTAR2 ENCODE chr12:6562269-6562391
64251 chr6 33423707 33423707 1 + C T UCEC 33423704 + 33423684 33423724 41 ACTTGAGCTTCCTGCCCCTCCTGCACTGCCCCCCAAAATCT ACTTGAGCTTCCTGCCCCTCCTGTACTGCCCCCCAAAATCT < 41bp 0.725574011939346 0.503661850307854 0.012238562 0.013048798 prediction 0.443824323262984 Functional Loss - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33423704 chr6:33423707 nonsynonymous SNV 0.456 0 24 hm5C_associated_SNPs_80540 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33423690-33423734
64251 chr9 114393962 114393962 1 + G C OV 114393961 + 114393941 114393981 41 CCGGAGACGAGGGCCCCGGGCGGACGCCGCAGAGCGCCGAG CCGGAGACGAGGGCCCCGGGCCGACGCCGCAGAGCGCCGAG < 41bp 0.721909963635352 0.44260982059365 0.6035654 0.10578644 prediction 0.443819927270703 Functional Loss - DNAJC25;DNAJC25-GNG10 ENSG00000059769;ENSG00000244115 CDS Human other chr9:114393961 chr9:114393962 nonsynonymous SNV 0.982 0 22 hm5C_associated_SNPs_80542 0 0 2 GEMIN5 POSTAR2 ENCODE chr9:114393903-114393962
64251 chr1 84650823 84650823 1 + G T LUAD 84650820 + 84650800 84650840 41 CATGGTTATGGAATATGTCCCTGGGGGTGAAATGTTTTCAC CATGGTTATGGAATATGTCCCTGTGGGTGAAATGTTTTCAC < 41bp 0.721905715700621 0.358767956888482 0.33051258 0.059182018 prediction 0.443811431401242 Functional Loss - PRKACB ENSG00000142875 CDS Human protein_coding chr1:84650820 chr1:84650823 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80544 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:84650805-84650828
64251 chr1 164790808 164790808 1 + G A LUSC 164790805 + 164790785 164790825 41 TCGCCATGTTATCAGCCAGACAGGAGGATACAGTGATGGAC TCGCCATGTTATCAGCCAGACAGAAGGATACAGTGATGGAC < 41bp 0.741419154114186 0.519516252632626 0.33556348 0.24714336 prediction 0.44380580296312 Functional Loss - PBX1 ENSG00000185630 CDS Human protein_coding chr1:164790805 chr1:164790808 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80546 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:164790799-164790828
64251 chr1 65280433 65280433 1 + C T LIHC 65280430 + 65280410 65280450 41 CATAAGACTGGAATTGCAAGCAGCATTCTGGATGCAATCTC CATAAGACTGGAATTGCAAGCAGTATTCTGGATGCAATCTC < 41bp 0.731386167208364 0.509484877020827 0.68017435 0.78158975 prediction 0.443802580375074 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65280430 chr1:65280433 synonymous SNV . 0 24 hm5C_associated_SNPs_80548 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:65280411-65280436
64251 chr19 36728009 36728009 1 + C T BLCA 36728007 + 36727987 36728027 41 TGTTTGTGGAAAAGCCTTCTCTCAGAGCTCATCTCTCACTG TGTTTGTGGAAAAGCCTTCTCTTAGAGCTCATCTCTCACTG < 41bp 0.721900769646275 0.451795505905373 0.15330723 0.09681383 prediction 0.44380153929255 Functional Loss - ZNF146 ENSG00000167635 CDS Human protein_coding chr19:36728007 chr19:36728009 stopgain 0.998 0 23 hm5C_associated_SNPs_80549 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36726516-36728221
64251 chr19 44352272 44352272 1 + G A UCEC 44352269 + 44352249 44352289 41 GGTATCAACTTACTCGACATCAGGTATTTCACACTGGTGAG GGTATCAACTTACTCGACATCAGATATTTCACACTGGTGAG < 41bp 0.721898489146033 0.4753872688232 0.29143816 0.16020885 prediction 0.443796978292066 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352269 chr19:44352272 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_80550 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44352174-44352292
64251 chr14 76639931 76639931 1 + G A COAD 76639928 + 76639908 76639948 41 TCGTCTACCTGGAGCTGCAGCTCGATGCCTCAGAAAGGGGC TCGTCTACCTGGAGCTGCAGCTCAATGCCTCAGAAAGGGGC < 41bp 0.721887298181073 0.488517299273932 0.10269526 0.43565854 prediction 0.443774596362145 Functional Loss - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76639928 chr14:76639931 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_80554 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:76639896-76639937
64251 chr8 56879313 56879313 1 + T C LUAD 56879312 + 56879292 56879332 41 CCAAGGTGGCTGTGAAAACCCTGAAGCCAGGAACTATGTCT CCAAGGTGGCTGTGAAAACCCCGAAGCCAGGAACTATGTCT < 41bp 0.796996333574115 0.57512000590359 0.19115722 0.28261706 prediction 0.44375265534105 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56879312 chr8:56879313 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_80560 0 0 2 LIN28B POSTAR2 ENCODE chr8:56879272-56879357
64251 chr2 133402949 133402949 1 - G A rs61735719 133402951 - 133402931 133402971 41 GCGCTGTCGGTGGTGGAGTGCGCATGTACGCGCAGGCGCTT GCGCTGTCGGTGGTGGAGTGCGTATGTACGCGCAGGCGCTT < 41bp 0.760725598529434 0.538851748953463 0.19201049 0.11341259 prediction 0.443747699151942 Functional Loss - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402951 chr2:133402949 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_80561 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:133402945-133402977
64251 chr7 36338756 36338756 1 + C T BLCA 36338754 + 36338734 36338774 41 CTGGAGCAAGAAGGATGCCCCTCGGAACGGCAGCGGGGTGG CTGGAGCAAGAAGGATGCCCCTTGGAACGGCAGCGGGGTGG < 41bp 0.721871494836616 0.451705614877262 0.5251948 0.1725606 prediction 0.443742989673231 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36338754 chr7:36338756 nonsynonymous SNV 0.132 3 23 hm5C_associated_SNPs_80565 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:36338732-36338770
64251 chr10 283566 283566 1 + G A ESCA 283563 + 283543 283583 41 AAGGGGAAGGACAATAAACACCCGATGTACAGGAGGCTGGT AAGGGGAAGGACAATAAACACCCAATGTACAGGAGGCTGGT < 41bp 0.721867767448643 0.498243723873357 0.3699929 0.14066365 prediction 0.443735534897286 Functional Loss - ZMYND11 ENSG00000015171 CDS Human protein_coding chr10:283563 chr10:283566 synonymous SNV . 0 24 hm5C_associated_SNPs_80570 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:283549-283573
64251 chr9 114429103 114429103 1 + G T HNSC 114429101 + 114429081 114429121 41 TCCCTTTGTTTCAGGTCTCTCAGGCAGCTGCAGAGCTTCAA TCCCTTTGTTTCAGGTCTCTCATGCAGCTGCAGAGCTTCAA < 41bp 0.721865398878595 0.369443459057325 0.6789068 0.046822816 prediction 0.443730797757189 Functional Loss - DNAJC25-GNG10;GNG10 ENSG00000059769;ENSG00000242616;ENSG00000244115 CDS Human other chr9:114429101 chr9:114429103 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_80572 0 0 1 DDX3X POSTAR2 ENCODE chr9:114429094-114429117
64251 chr19 17628154 17628154 1 + G A CESC 17628151 + 17628131 17628171 41 TGCTGATCCTGGGGGTGGGCCCCGATGGTCACACCTGCTCA TGCTGATCCTGGGGGTGGGCCCCAATGGTCACACCTGCTCA < 41bp 0.721862287374547 0.468944354800479 0.102650315 0.06859639 prediction 0.443724574749094 Functional Loss - PGLS ENSG00000130313 CDS Human protein_coding chr19:17628151 chr19:17628154 nonsynonymous SNV 0.563 4 24 hm5C_associated_SNPs_80576 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17628127-17628154
64251 chr3 52841088 52841088 1 + G T ACC 52841086 + 52841066 52841106 41 AGGGCCGTGCCGAGCACTTTCAGCTGGCTGGACACAGTCAC AGGGCCGTGCCGAGCACTTTCATCTGGCTGGACACAGTCAC < 41bp 0.721859973141579 0.365543605498815 0.49893767 0.21080163 prediction 0.443719946283158 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52841086 chr3:52841088 nonsynonymous SNV 0.928 2 23 hm5C_associated_SNPs_80578 0 0 5 LIN28B POSTAR2 ENCODE chr3:52841015-52841113
64251 chr5 36183971 36183971 1 + G T LUAD 36183969 + 36183949 36183989 41 ACAAGAGCTGGGGTTAGGATCCGGTTGGACTCTGACATCGG ACAAGAGCTGGGGTTAGGATCCTGTTGGACTCTGACATCGG < 41bp 0.72185696516688 0.456047230490103 0.21972811 0.028491706 prediction 0.44371393033376 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36183969 chr5:36183971 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_80579 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:36183941-36183999
64251 chr9 86616112 86616112 1 + G A BLCA 86616109 + 86616089 86616129 41 ATTTGGAGCATCCTCTTTTACCCGATGGCATTTTAGAAATT ATTTGGAGCATCCTCTTTTACCCAATGGCATTTTAGAAATT < 41bp 0.729873332295771 0.508016459768227 0.25616428 0.3749575 prediction 0.443713745055088 Functional Loss - RMI1 ENSG00000178966 CDS Human protein_coding chr9:86616109 chr9:86616112 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_80580 0 0 1 EWSR1 POSTAR2 SRX029344 chr9:86616096-86616124
64251 chr21 34635478 34635478 1 + C T rs145095223 34635476 + 34635456 34635496 41 GTCCACTCCAGGACCCTTTTCCCGAAGAGGACTACAGCTCC GTCCACTCCAGGACCCTTTTCCTGAAGAGGACTACAGCTCC < 41bp 0.721854309648562 0.449138794013585 0.44447187 0.21058494 prediction 0.443708619297125 Functional Loss - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635476 chr21:34635478 synonymous SNV . 0 23 hm5C_associated_SNPs_80582 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:34635456-34635479
64251 chrX 103218018 103218018 1 + G A rs192122585 103218015 + 103217995 103218035 41 TATTGTCTCTTCTGAACAAACTCGAGACTTTCACAGGGCAC TATTGTCTCTTCTGAACAAACTCAAGACTTTCACAGGGCAC < 41bp 0.788668684340638 0.566820693841783 0.7137651 0.35001954 prediction 0.44369598099771 Functional Loss - TMSB15B ENSG00000158427 UTR5 Human protein_coding chrX:103218015 chrX:103218018 . . 0 24 hm5C_associated_SNPs_80584 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:103218005-103218028
64251 chr1 226411539 226411539 1 + G C rs562675827 226411535 + 226411515 226411555 41 GCGGGCCCCGGCCCAGCGACCTTTGCGGGCTTCCTCGGCCG GCGGGCCCCGGCCCAGCGACCTTTCCGGGCTTCCTCGGCCG < 41bp 0.721842831497413 0.449056965548541 0.18494824 0.08902529 prediction 0.443685662994825 Functional Loss - MIXL1 ENSG00000185155 CDS Human protein_coding chr1:226411535 chr1:226411539 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_80589 0 0 1 DDX6 POSTAR2 ENCODE chr1:226411502-226411556
64251 chr5 37064838 37064838 1 + C T GBM 37064836 + 37064816 37064856 41 GCTCCTGGACTGAGGCTAAGCGCCGTGATGGCCGCAAACTG GCTCCTGGACTGAGGCTAAGCGTCGTGATGGCCGCAAACTG < 41bp 0.799495203036788 0.577655741761957 0.2964259 0.2353977 prediction 0.443678922549662 Functional Loss - NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064836 chr5:37064838 synonymous SNV . 0 23 hm5C_associated_SNPs_80593 0 0 1 RBM22 POSTAR2 ENCODE chr5:37064791-37064841
64251 chr8 99148943 99148943 1 + T C LUAD 99148942 + 99148922 99148962 41 TCTACCATACTCTTGGATCTCTCCAACCACAGGCATTATAA TCTACCATACTCTTGGATCTCCCCAACCACAGGCATTATAA < 41bp 0.721836807169369 0.439039930923596 0.9669355 0.19650075 prediction 0.443673614338738 Functional Loss - POP1 ENSG00000104356 CDS Human protein_coding chr8:99148942 chr8:99148943 synonymous SNV . 0 22 hm5C_associated_SNPs_80596 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:99148921-99148953
64251 chr19 35633639 35633639 1 + G T UCEC 35633637 + 35633617 35633657 41 CCCCCAGGTCTGTCCACCCGCAGGCGGTAGAAACACCTGGA CCCCCAGGTCTGTCCACCCGCATGCGGTAGAAACACCTGGA < 41bp 0.721831147036901 0.364447393738566 0.8656204 0.31545871 prediction 0.443662294073803 Functional Loss - FXYD1 ENSG00000266964 CDS Human protein_coding chr19:35633637 chr19:35633639 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_80601 0 0 3 PPIG POSTAR2 ENCODE chr19:35633622-35633678
64251 chrX 153662678 153662678 1 + G T LUAD 153662676 + 153662656 153662696 41 ACCGCTCCCCGGATCCTGTTCTGGGCCCAAAACTTCTCTGT ACCGCTCCCCGGATCCTGTTCTTGGCCCAAAACTTCTCTGT < 41bp 0.721822800015999 0.368533914292804 0.6663543 0.16103989 prediction 0.443645600031999 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153662676 chrX:153662678 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_80607 0 0 10 IGF2BP2 POSTAR2 GSE21578,GSM545208 chrX:153662659-153662685
64251 chr19 54080796 54080796 1 + G A UCEC 54080793 + 54080773 54080813 41 TCCACACCGGTGAGAAGCCTCACGAATGTAAGGAGTGTGGG TCCACACCGGTGAGAAGCCTCACAAATGTAAGGAGTGTGGG < 41bp 0.76661218183177 0.544791152186008 0.11126804 0.16427588 prediction 0.443642059291523 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080793 chr19:54080796 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_80608 0 0 1 EIF3H POSTAR2 ENCODE chr19:54080752-54080853
64251 chr6 1390608 1390608 1 + G T LUAD 1390606 + 1390586 1390626 41 CCTTCTTCCGCGGCGCCTACCAGGGCTGGAAGAACTCGGTG CCTTCTTCCGCGGCGCCTACCATGGCTGGAAGAACTCGGTG < 41bp 0.910765349351345 0.688948688525894 0.94422454 0.41579026 prediction 0.443633321650904 Functional Loss - FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390606 chr6:1390608 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_80609 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:1390580-1390647
64251 chr1 9613739 9613739 1 + C T COAD 9613737 + 9613717 9613757 41 TCCACTAGAAGTCATTAAGACACGGTTGCAGTCTTCAAGAT TCCACTAGAAGTCATTAAGACATGGTTGCAGTCTTCAAGAT < 41bp 0.845552834942005 0.623739150998535 0.21201879 0.19314343 prediction 0.443627367886938 Functional Loss - SLC25A33 ENSG00000171612 CDS Human protein_coding chr1:9613737 chr1:9613739 nonsynonymous SNV 0.644 5 23 hm5C_associated_SNPs_80611 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:9613720-9613740
64251 chr7 75615287 75615287 1 + G A rs1057870 75615284 + 75615264 75615304 41 CTGTACTACGGCTGCCGCCGCTCGGATGAGGACTACCTGTA CTGTACTACGGCTGCCGCCGCTCAGATGAGGACTACCTGTA < 41bp 0.798966874587496 0.577158696204189 0.3989119 0.19141507 prediction 0.443616356766614 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75615284 chr7:75615287 synonymous SNV . 0 24 hm5C_associated_SNPs_80615 2 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:75615267-75615302
64251 chr5 131822042 131822042 1 - T A STAD 131822046 - 131822026 131822066 41 GCACTGTCGCCATGTGCTGTCAGCAGCACTCTCCCCGACTG GCACTGTCGCCATGTGCTGTCAGCTGCACTCTCCCCGACTG < 41bp 0.885203968776382 0.66339841442946 0.62064457 0.92051363 prediction 0.443611108693843 Functional Loss - IRF1 ENSG00000125347 CDS Human protein_coding chr5:131822046 chr5:131822042 nonsynonymous SNV 0.816 1 25 hm5C_associated_SNPs_80617 0 0 2 BUD13 POSTAR2 ENCODE chr5:131822031-131822081
64251 chr16 31927105 31927105 1 + A C COAD 31927101 + 31927081 31927121 41 GTTCTTGCCTTACTCAACATCGGAAAATTCATACTGGAGAA GTTCTTGCCTTACTCAACATCGGACAATTCATACTGGAGAA < 41bp 0.72179663514217 0.326494012609119 0.39690486 0.18317431 prediction 0.443593270284339 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31927101 chr16:31927105 nonsynonymous SNV 0.141 1 25 hm5C_associated_SNPs_80622 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:31927066-31927122
64251 chr18 29691857 29691857 1 + G A LGG 29691854 + 29691834 29691874 41 AAATATAATGAGGAAGTTTTCTGGTAGCTGCAGATGCTGTG AAATATAATGAGGAAGTTTTCTGATAGCTGCAGATGCTGTG < 41bp 0.736382323044587 0.514591269823588 0.3165111 0.1374028 prediction 0.443582106441998 Functional Loss - RNF138 ENSG00000134758 CDS Human protein_coding chr18:29691854 chr18:29691857 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80625 0 0 1 IGF2BP2 POSTAR2 ENCODE chr18:29691843-29691883
64251 chr12 4385256 4385256 1 + C T UCEC 4385253 + 4385233 4385273 41 TTTCTTGGCTGGGGTCCCGACTCCGAAGTCCCATCTGCAAC TTTCTTGGCTGGGGTCCCGACTCTGAAGTCCCATCTGCAAC < 41bp 0.758324666564727 0.536543732788903 0.37213475 0.09804264 prediction 0.443561867551648 Functional Loss - CCND2 ENSG00000118971 CDS Human protein_coding chr12:4385253 chr12:4385256 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_80632 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:4385228-4385261
64251 chr10 54074366 54074366 1 + T C UCEC 54074365 + 54074345 54074385 41 GGCGCTGCGGGGCACCCAGGCTCTGCAGTCAGCGCCGCGCC GGCGCTGCGGGGCACCCAGGCCCTGCAGTCAGCGCCGCGCC < 41bp 0.721777016934973 0.47989175947618 0.14939263 0.16041869 prediction 0.443554033869945 Functional Loss - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074365 chr10:54074366 nonsynonymous SNV 0.676 0 22 hm5C_associated_SNPs_80633 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074360-54074400
64251 chr22 38061816 38061816 1 + G A rs140970741 38061813 + 38061793 38061833 41 CCTACCTAGCGGCCGGCCAGCACGACCTCGTGCCCCATTAC CCTACCTAGCGGCCGGCCAGCACAACCTCGTGCCCCATTAC < 41bp 0.780149963437956 0.558380721373683 0.13590124 0.11652416 prediction 0.443538484128546 Functional Loss - PDXP ENSG00000100092;ENSG00000241360 CDS Human other chr22:38061813 chr22:38061816 nonsynonymous SNV 0.588 0 24 hm5C_associated_SNPs_80637 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:38061792-38061822
64251 chr10 43604510 43604510 1 + G A SKCM 43604507 + 43604487 43604527 41 CTCAACCGGAACCTCTCCATCTCGGAGAACCGCACCATGCA CTCAACCGGAACCTCTCCATCTCAGAGAACCGCACCATGCA < 41bp 0.721766318025598 0.47162189689625 0.9520107 0.79083914 prediction 0.443532636051196 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43604507 chr10:43604510 synonymous SNV . 0 24 hm5C_associated_SNPs_80639 3 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr3 169504372 169504372 1 + C T STAD 169504370 + 169504350 169504390 41 CATCACATGCTTCTGCCTGTCACGGATACTCAGTCTCCTAC CATCACATGCTTCTGCCTGTCATGGATACTCAGTCTCCTAC < 41bp 0.833489880880199 0.61172766960649 0.48513824 0.7716849 prediction 0.443524422547418 Functional Loss - MYNN ENSG00000085274 CDS Human protein_coding chr3:169504370 chr3:169504372 nonsynonymous SNV 0.313 2 23 hm5C_associated_SNPs_80640 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:169504368-169504395
64251 chr17 40818677 40818677 1 + C T UCEC 40818675 + 40818655 40818695 41 TGCGGAAGCGGGATGCCTTCCTCGAGCAGTTCCGTAAGGAG TGCGGAAGCGGGATGCCTTCCTTGAGCAGTTCCGTAAGGAG < 41bp 0.850951322765864 0.629193246256556 0.33475065 0.038573682 prediction 0.443516153018615 Functional Loss - TUBG2 ENSG00000037042 CDS Human protein_coding chr17:40818675 chr17:40818677 synonymous SNV . 0 23 hm5C_associated_SNPs_80642 0 0 2 LSM11 POSTAR2 ENCODE chr17:40818656-40818969
64251 chr9 125075623 125075623 1 + G A SKCM 125075620 + 125075600 125075640 41 ATGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGA ATGAACAAGCTGAAGAAATCCAAAGATACAGTCTCAGAGGA < 41bp 0.728799356467708 0.507042667204626 0.2686193 0.08463508 prediction 0.443513378526165 Functional Loss - MRRF ENSG00000148187 CDS Human protein_coding chr9:125075620 chr9:125075623 synonymous SNV . 0 24 hm5C_associated_SNPs_80643 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:125075593-125075628
64251 chr10 70450697 70450697 1 + C T SKCM 70450694 + 70450674 70450714 41 TCACCCAGTGAAAGAGGCATCTCCAGGCTTCTCCTGGTCCC TCACCCAGTGAAAGAGGCATCTCTAGGCTTCTCCTGGTCCC < 41bp 0.721750973511992 0.497653438533788 0.9241511 0.84820616 prediction 0.443501947023984 Functional Loss - TET1 ENSG00000138336 CDS Human protein_coding chr10:70450694 chr10:70450697 nonsynonymous SNV 0.139 0 24 hm5C_associated_SNPs_80645 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70450675-70450716
64251 chr10 70450696 70450696 1 + C T SKCM 70450694 + 70450674 70450714 41 TCACCCAGTGAAAGAGGCATCTCCAGGCTTCTCCTGGTCCC TCACCCAGTGAAAGAGGCATCTTCAGGCTTCTCCTGGTCCC < 41bp 0.721750973511992 0.429489902245776 0.9241511 0.33993804 prediction 0.443501947023984 Functional Loss - TET1 ENSG00000138336 CDS Human protein_coding chr10:70450694 chr10:70450696 nonsynonymous SNV 0.133 0 23 hm5C_associated_SNPs_80646 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70450675-70450716
64251 chr22 32871365 32871365 1 + G A rs9621461 32871362 + 32871342 32871382 41 GGAGAACATGGCCCGGCCTCCCGGGGGCTCTGGTCCCCTCC GGAGAACATGGCCCGGCCTCCCGAGGGCTCTGGTCCCCTCC < 41bp 0.788466424316624 0.566720408816511 0.9298323 0.9035646 prediction 0.443492031000227 Functional Loss - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32871362 chr22:32871365 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_80651 0 0 3 DROSHA POSTAR2 ENCODE chr22:32871347-32871399
64251 chr1 3544178 3544178 1 + G A BLCA 3544175 + 3544155 3544195 41 TATGCCACTTTCACAGAACACCCGATGGCTGGCGCAGATGA TATGCCACTTTCACAGAACACCCAATGGCTGGCGCAGATGA < 41bp 0.758696631772084 0.536955996887475 0.1138044 0.047953814 prediction 0.443481269769218 Functional Loss - TPRG1L ENSG00000158109 CDS Human protein_coding chr1:3544175 chr1:3544178 synonymous SNV . 0 24 hm5C_associated_SNPs_80654 0 0 2 DDX55 POSTAR2 ENCODE chr1:3544167-3544206
64251 chr3 52526232 52526232 1 + G A THCA 52526229 + 52526209 52526249 41 ATGGCCGCCGCGTCCGGGACCTGGACCGAGTGCTCATGGGC ATGGCCGCCGCGTCCGGGACCTGAACCGAGTGCTCATGGGC < 41bp 0.774348651691915 0.552614071916487 0.5552751 0.34065282 prediction 0.443469159550855 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526229 chr3:52526232 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_80660 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:52526232-52526233
64251 chr6 7395353 7395353 1 + A C UCEC 7395349 + 7395329 7395369 41 CTCCAGCAGACAAGGTCTTACGGAAATTTGAGAATAAAATT CTCCAGCAGACAAGGTCTTACGGACATTTGAGAATAAAATT < 41bp 0.721733127958306 0.310456554354172 0.21148357 0.180933 prediction 0.443466255916612 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7395349 chr6:7395353 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_80661 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221663 chr6:7395340-7395360
64251 chr3 122808134 122808134 1 + C T SKCM 122808131 + 122808111 122808151 41 AATAATGTACTGGTGCTTTACTCCAAATCTGGTGAGTGTCC AATAATGTACTGGTGCTTTACTCTAAATCTGGTGAGTGTCC < 41bp 0.750341528775771 0.528608946296787 0.95990026 0.9265916 prediction 0.443465164957968 Functional Loss - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122808131 chr3:122808134 synonymous SNV . 0 24 hm5C_associated_SNPs_80662 0 0 2 DDX3X POSTAR2 ENCODE chr3:122808012-122808137
64251 chr11 44098985 44098985 1 + G A rs2074043 44098982 + 44098962 44099002 41 TGCCTGTGGTCAAGAGTTTCCTGGGTCTGAATTTGAGGGTG TGCCTGTGGTCAAGAGTTTCCTGAGTCTGAATTTGAGGGTG < 41bp 0.774111611674966 0.552379357689919 0.87855375 0.37574765 prediction 0.443464507970094 Functional Loss - ACCS ENSG00000110455 intronic Human protein_coding chr11:44098982 chr11:44098985 . . 0 24 hm5C_associated_SNPs_80663 0 0 3 BUD13 POSTAR2 ENCODE chr11:44098934-44098993
64251 chr11 44097123 44097123 1 + G A UCEC 44097120 + 44097100 44097140 41 TCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGG TCGCTCTTCTCTGCTCTGGCCACAGTGCTGTGTGAGGCCGG < 41bp 0.79804307966088 0.576320486576252 0.41149113 0.24918386 prediction 0.443445186169256 Functional Loss - ACCS ENSG00000110455 CDS Human protein_coding chr11:44097120 chr11:44097123 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_80666 0 0 1 DDX24 POSTAR2 ENCODE chr11:44097092-44097139
64251 chr1 156100449 156100449 1 + G T STAD 156100446 + 156100426 156100466 41 TGACCTGATAGCTGCTCAGGCTCGGCTGAAGGACCTGGAGG TGACCTGATAGCTGCTCAGGCTCTGCTGAAGGACCTGGAGG < 41bp 0.721721371013323 0.32454617177352 0.1164608 0.094805986 prediction 0.443442742026646 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156100446 chr1:156100449 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_80667 4 0 13 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr1:156100427-156100462
64251 chr16 31142350 31142350 1 + C T rs78242929 31142348 + 31142328 31142368 41 GACCAGCTCCCAGGATGGAGCCCGGGGCAGGCCTCTCATTC GACCAGCTCCCAGGATGGAGCCTGGGGCAGGCCTCTCATTC < 41bp 0.781241052823053 0.559523194323243 0.86269534 0.87620986 prediction 0.443435716999618 Functional Loss - KAT8 ENSG00000103510 UTR3 Human protein_coding chr16:31142348 chr16:31142350 . . 0 23 hm5C_associated_SNPs_80668 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:31142326-31142357
64251 chr1 155532164 155532164 1 - C G rs564823511 155532168 - 155532148 155532188 41 GGAGGGGAGACGATCCCAGTCTCGGTTGCGGGACCCGCCTC GGAGGGGAGACGATCCCAGTCTCGCTTGCGGGACCCGCCTC < 41bp 0.834877272106483 0.613162288049559 0.05405596 0.04774928 prediction 0.443429968113848 Functional Loss - ASH1L-AS1 ENSG00000235919 ncRNA_exonic Human antisense chr1:155532168 chr1:155532164 . . 0 25 hm5C_associated_SNPs_80670 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:155532160-155532180
64251 chr13 115090570 115090570 1 + A C LUAD 115090566 + 115090546 115090586 41 AGGCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCCGGC AGGCAGTTCCCCCAGTGTCTCCAGCGCTTCGCAAACCCGGC < 41bp 0.72171418934805 0.317986853203646 0.91627514 0.3569759 prediction 0.4434283786961 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090566 chr13:115090570 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_80671 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr8 59352268 59352268 1 + G A BLCA 59352265 + 59352245 59352285 41 ATATGGAGGATCATCAGGATCAAGAATACATAAAACCTAGA ATATGGAGGATCATCAGGATCAAAAATACATAAAACCTAGA < 41bp 0.738181446603923 0.516468289266776 0.14449024 0.029130131 prediction 0.443426314674295 Functional Loss - UBXN2B ENSG00000215114 CDS Human protein_coding chr8:59352265 chr8:59352268 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_80673 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:59352232-59352273
64251 chr11 118509945 118509945 1 + G A LUAD 118509942 + 118509922 118509962 41 CTCACAGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCT CTCACAGGGGGCAGGCCTTTCCCAAAGACCACATCGACCCT < 41bp 0.721710809300432 0.479181917430711 0.25150335 0.09338671 prediction 0.443421618600864 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118509942 chr11:118509945 synonymous SNV . 0 24 hm5C_associated_SNPs_80677 0 0 2 BUD13 POSTAR2 ENCODE chr11:118509851-118509950
64251 chr22 50320943 50320943 1 + C T rs1608 50320941 + 50320921 50320961 41 GCCCGACACAGCTGCCCTCCCGCGAAGACCTGTAATGTGCC GCCCGACACAGCTGCCCTCCCGTGAAGACCTGTAATGTGCC < 41bp 0.804260657430475 0.582555559606839 0.113360345 0.044232726 prediction 0.443410195647273 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50320941 chr22:50320943 synonymous SNV . 0 23 hm5C_associated_SNPs_80682 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr22:50320915-50320944
64251 chr8 17417917 17417917 1 + C T SKCM 17417915 + 17417895 17417935 41 GGATCGTCTCCCAGGGTAACCTCGAAGAGTGAGTCCCAGGT GGATCGTCTCCCAGGGTAACCTTGAAGAGTGAGTCCCAGGT < 41bp 0.867626608497644 0.64592573737705 0.9193343 0.15781033 prediction 0.443401742241187 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17417915 chr8:17417917 nonsynonymous SNV 0.366 1 23 hm5C_associated_SNPs_80684 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17417913-17417945
64251 chr16 54967571 54967571 1 + C T CESC 54967569 + 54967549 54967589 41 GCGCCCTTCTATCCCGGCTACACGAACTATGGCTCCTTCGG GCGCCCTTCTATCCCGGCTACATGAACTATGGCTCCTTCGG < 41bp 0.839973313320827 0.618275604683855 0.19489902 0.13001248 prediction 0.443395417273943 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967569 chr16:54967571 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_80686 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:54967524-54967587
64251 chr7 99702897 99702897 1 + G A UCEC 99702894 + 99702874 99702914 41 GGAATCCGGGTCGATGAAGTCTCGTTTCACAGCTCTGTGAA GGAATCCGGGTCGATGAAGTCTCATTTCACAGCTCTGTGAA < 41bp 0.780605436864566 0.558908651632954 0.18842044 0.14878029 prediction 0.443393570463223 Functional Loss - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702894 chr7:99702897 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_80687 1 0 1 DDX24 POSTAR2 ENCODE chr7:99702860-99702914
64251 chr2 73476280 73476280 1 + T C COAD 73476279 + 73476259 73476299 41 GTTCTGTGCTGGCCGAGTACCTGAGGAGGATCTGAAGAGGA GTTCTGTGCTGGCCGAGTACCCGAGGAGGATCTGAAGAGGA < 41bp 0.800063911815207 0.578370578492381 0.39087865 0.50836605 prediction 0.443386666645652 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476279 chr2:73476280 synonymous SNV . 0 22 hm5C_associated_SNPs_80690 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476116-73476315
64251 chr7 97832937 97832937 1 + G T UCEC 97832934 + 97832914 97832954 41 GTGGAGGAGAGGCGTGCGGCCCGGACCTGAGCGGCCCAGCC GTGGAGGAGAGGCGTGCGGCCCGTACCTGAGCGGCCCAGCC < 41bp 0.72169160344033 0.319293117022366 0.28756496 0.09996012 prediction 0.443383206880659 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97832934 chr7:97832937 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_80691 0 0 2 BUD13 POSTAR2 ENCODE chr7:97832879-97832974
64251 chr1 161176280 161176280 1 + C T COAD 161176277 + 161176257 161176297 41 ACCCAGCAGCGCATGGTGTCCTGCGACTAGTGATGGAATTG ACCCAGCAGCGCATGGTGTCCTGTGACTAGTGATGGAATTG < 41bp 0.735271834374818 0.513580446177727 0.18465775 0.19706786 prediction 0.443382776394183 Functional Loss - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161176277 chr1:161176280 stopgain 0.995 1 24 hm5C_associated_SNPs_80692 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:161176240-161176293
64251 chr19 19168730 19168730 1 + G A rs11549381 19168727 + 19168707 19168747 41 CTACCAGAGGGGGCAAAGGGCACGTCCCATCACTCACTGCC CTACCAGAGGGGGCAAAGGGCACATCCCATCACTCACTGCC < 41bp 0.721689657138154 0.487911211495151 0.07936978 0.14068538 prediction 0.443379314276308 Functional Loss - ARMC6 ENSG00000105676 UTR3 Human protein_coding chr19:19168727 chr19:19168730 . . 0 24 hm5C_associated_SNPs_80693 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:19168724-19168745
64251 chr4 184618969 184618969 1 + C T SKCM 184618967 + 184618947 184618987 41 CCATGACCACAGTGGACCAGCTCGAGTCTCAAGTGGACAAT CCATGACCACAGTGGACCAGCTTGAGTCTCAAGTGGACAAT < 41bp 0.857421654042892 0.635734886180337 0.3223949 0.28861052 prediction 0.44337353572511 Functional Loss - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184618967 chr4:184618969 synonymous SNV . 0 23 hm5C_associated_SNPs_80695 0 0 1 BUD13 POSTAR2 ENCODE chr4:184618873-184618994
64251 chr11 105948587 105948587 1 + G A LUSC 105948584 + 105948564 105948604 41 GAGGAGAAGGAGCGCATTGGCCAGTTCGTCTTTGCCCGGGA GAGGAGAAGGAGCGCATTGGCCAATTCGTCTTTGCCCGGGA < 41bp 0.761221305215675 0.539536022739818 0.030991763 0.012648642 prediction 0.443370564951713 Functional Loss - AASDHPPT ENSG00000149313 CDS Human protein_coding chr11:105948584 chr11:105948587 synonymous SNV . 0 24 hm5C_associated_SNPs_80696 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:105948558-105948587
64251 chr22 41911921 41911921 1 + G T LUSC 41911919 + 41911899 41911939 41 TGTAGACTCCATCTCCTGCACTGGTGAGGAAGGCGGCCAGG TGTAGACTCCATCTCCTGCACTTGTGAGGAAGGCGGCCAGG < 41bp 0.721682121728485 0.369518049729615 0.31409734 0.16682816 prediction 0.44336424345697 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41911919 chr22:41911921 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_80700 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:41911893-41911922
64251 chr10 72496501 72496501 1 + G T UCEC 72496498 + 72496478 72496518 41 CCTGACAACCCGTACTTCTGCAAGACCAAGAAGGGGCCCCC CCTGACAACCCGTACTTCTGCAATACCAAGAAGGGGCCCCC < 41bp 0.72167698231571 0.314647081526499 0.36030054 0.12349489 prediction 0.443353964631419 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72496498 chr10:72496501 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80703 0 0 4 DDX24 POSTAR2 ENCODE chr10:72496498-72496545
64251 chr20 34828459 34828459 1 + T C rs716431 34828458 + 34828438 34828478 41 CCCAGAGGGTGCCACGCCAGCTGAGATAACCAAGCACAGCA CCCAGAGGGTGCCACGCCAGCCGAGATAACCAAGCACAGCA < 41bp 0.79124135085267 0.569572693554106 0.12381023 0.2784781 prediction 0.443337314597128 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828458 chr20:34828459 synonymous SNV . 0 22 hm5C_associated_SNPs_80712 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:34828450-34828471
64251 chr6 28056881 28056881 1 + G C HNSC 28056877 + 28056857 28056897 41 GCTCAAAACTTGCTAGGCATCAGAGAATCCACACTGGAGAG GCTCAAAACTTGCTAGGCATCAGACAATCCACACTGGAGAG < 41bp 0.869514947744955 0.647854847686867 0.6627225 0.16777906 prediction 0.443320200116176 Functional Loss - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28056877 chr6:28056881 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_80715 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:28056879-28056916
64251 chr9 36677293 36677293 1 + A C LIHC 36677292 + 36677272 36677312 41 AAGGGCGATGCCTGGGTTTACAAAAGATTAGTGGAAGACAT AAGGGCGATGCCTGGGTTTACCAAAGATTAGTGGAAGACAT < 41bp 0.771976857773993 0.550317363314266 0.27794534 0.3167364 prediction 0.443318988919456 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36677292 chr9:36677293 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_80716 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:36677263-36677374
64251 chr20 46251038 46251038 1 + G A OV 46251035 + 46251015 46251055 41 GGATCCACTGGCCAGTGATTCACGAAAACGCAAATTGCCAT GGATCCACTGGCCAGTGATTCACAAAAACGCAAATTGCCAT < 41bp 0.742928995078988 0.521270799784498 0.54925466 0.20015404 prediction 0.44331639058898 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46251035 chr20:46251038 nonsynonymous SNV 0.981 3 24 hm5C_associated_SNPs_80719 0 0 3 DDX24 POSTAR2 ENCODE chr20:46250993-46251064
64251 chr11 47282123 47282123 1 + C T ESCA 47282120 + 47282100 47282140 41 AGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGG AGCGTCATCAAGGGAGCGCACTATATCTGCCACAGTGGCGG < 41bp 0.729022825268151 0.507369083946344 0.36604434 0.2869667 prediction 0.443307482643615 Functional Loss - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47282120 chr11:47282123 synonymous SNV . 0 24 hm5C_associated_SNPs_80720 0 0 3 DDX55 POSTAR2 ENCODE chr11:47282061-47282132
64251 chr2 101607305 101607305 1 + G A UCEC 101607302 + 101607282 101607322 41 TCCTGTGACGCAAGGCAGCCCTCGGAAGTCAGCAGGACGGG TCCTGTGACGCAAGGCAGCCCTCAGAAGTCAGCAGGACGGG < 41bp 0.721648166478341 0.476321915046918 0.049828023 0.055344045 prediction 0.443296332956682 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101607302 chr2:101607305 synonymous SNV . 0 24 hm5C_associated_SNPs_80727 0 0 5 BUD13 POSTAR2 ENCODE chr2:101607242-101607376
64251 chr14 24026174 24026174 1 + G T rs141465409 24026172 + 24026152 24026192 41 GGAGCTCAAATGTCCTGGAGCAGCAGGTGTCTTAGGACCCC GGAGCTCAAATGTCCTGGAGCATCAGGTGTCTTAGGACCCC < 41bp 0.721643742801032 0.390431819241932 0.71368504 0.49561793 prediction 0.443287485602064 Functional Loss - THTPA ENSG00000259431 CDS Human protein_coding chr14:24026172 chr14:24026174 nonsynonymous SNV 0.858 0 23 hm5C_associated_SNPs_80729 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:24026166-24026201
64251 chr21 37741473 37741473 1 + G A SARC 37741470 + 37741450 37741490 41 ACATGAAATCAGAACAGAGTCACGTTGAGCAAGGTGGTGTT ACATGAAATCAGAACAGAGTCACATTGAGCAAGGTGGTGTT < 41bp 0.745082847990663 0.523441110642264 0.16181833 0.11097863 prediction 0.443283474696797 Functional Loss - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37741470 chr21:37741473 nonsynonymous SNV 0.454 0 24 hm5C_associated_SNPs_80730 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:37741432-37741479
64251 chr16 2580596 2580596 1 + G A GBM 2580593 + 2580573 2580613 41 CCTTGCTTACAGGTGCTGTCCTGGGCACAGGAGGTACGCGC CCTTGCTTACAGGTGCTGTCCTGAGCACAGGAGGTACGCGC < 41bp 0.791263059234349 0.569625139638685 0.3612237 0.114617914 prediction 0.443275839191328 Functional Loss - AMDHD2;CEMP1 ENSG00000162066;ENSG00000205923 CDS Human other chr16:2580593 chr16:2580596 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_80731 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2580568-2580607
64251 chr11 34154602 34154602 1 + C T COAD 34154599 + 34154579 34154619 41 CCCAATGATCTCCAGATGCTCTCCGATGCACCTGCTCACCA CCCAATGATCTCCAGATGCTCTCTGATGCACCTGCTCACCA < 41bp 0.739906113224593 0.518273471469714 0.111038834 0.018227547 prediction 0.443265283509758 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34154599 chr11:34154602 synonymous SNV . 0 24 hm5C_associated_SNPs_80734 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34154548-34154606
64251 chr19 14574911 14574911 1 + G A BRCA 14574908 + 14574888 14574928 41 AAGCTGAACCTCGGCACTGACTCGGACAGCTCACCTCAGAA AAGCTGAACCTCGGCACTGACTCAGACAGCTCACCTCAGAA < 41bp 0.721632296487322 0.47141591604263 0.33890665 0.20234427 prediction 0.443264592974644 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574908 chr19:14574911 synonymous SNV . 0 24 hm5C_associated_SNPs_80735 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:14574875-14574926
64251 chr6 123039098 123039098 1 + C T UCEC 123039095 + 123039075 123039115 41 CCCCTCAAACTGGAGGCTCTCTCCGTGAAGGAAGGTAATAC CCCCTCAAACTGGAGGCTCTCTCTGTGAAGGAAGGTAATAC < 41bp 0.741642204850523 0.520010589490664 0.19556463 0.10696104 prediction 0.443263230719717 Functional Loss - PKIB ENSG00000135549 CDS Human protein_coding chr6:123039095 chr6:123039098 synonymous SNV . 0 24 hm5C_associated_SNPs_80736 0 0 1 UPF1 POSTAR2 ENCODE chr6:123039006-123039109
64251 chr11 57428901 57428901 1 + T C UCEC 57428900 + 57428880 57428920 41 TGGATATCCGGTTCATGGATCTGAAGTAGAGATCAGCAGGA TGGATATCCGGTTCATGGATCCGAAGTAGAGATCAGCAGGA < 41bp 0.721626478070746 0.480942885282532 0.15914202 0.26808017 prediction 0.443252956141493 Functional Loss - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428900 chr11:57428901 nonsynonymous SNV 0.967 3 22 hm5C_associated_SNPs_80740 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:57428891-57428906
64251 chr16 1545504 1545504 1 + G T LUSC 1545501 + 1545481 1545521 41 TGGGCAAGGTGGTGGCCCTGCCCGATCACCTGGGCAACCGC TGGGCAAGGTGGTGGCCCTGCCCTATCACCTGGGCAACCGC < 41bp 0.721626197903857 0.319253435033252 0.18898192 0.032008648 prediction 0.443252395807715 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545501 chr16:1545504 nonsynonymous SNV 0.846 5 24 hm5C_associated_SNPs_80741 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr16:1545500-1545530
64251 chr16 1545503 1545503 1 + C T SKCM 1545501 + 1545481 1545521 41 TGGGCAAGGTGGTGGCCCTGCCCGATCACCTGGGCAACCGC TGGGCAAGGTGGTGGCCCTGCCTGATCACCTGGGCAACCGC < 41bp 0.721626197903857 0.450528355805766 0.18898192 0.058502823 prediction 0.443252395807715 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1545501 chr16:1545503 synonymous SNV . 0 23 hm5C_associated_SNPs_80742 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr16:1545500-1545530
64251 chr1 16091635 16091635 1 + G A SKCM 16091632 + 16091612 16091652 41 CTCCTGCCCCCATGAAGACACCCGAGGCTGGCTTGGCGGGG CTCCTGCCCCCATGAAGACACCCAAGGCTGGCTTGGCGGGG < 41bp 0.806600101150458 0.584975813191354 0.22886989 0.23251456 prediction 0.443248575918207 Functional Loss - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091632 chr1:16091635 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_80743 0 0 1 PPIG POSTAR2 ENCODE chr1:16091522-16091689
64251 chr1 236912466 236912466 1 + G A LGG 236912463 + 236912443 236912483 41 AAACCATTGATCAGCTTCACCTGGAGTTTGCCAAGAGGGCT AAACCATTGATCAGCTTCACCTGAAGTTTGCCAAGAGGGCT < 41bp 0.721623609508031 0.484041672385049 0.11742699 0.10141596 prediction 0.443247219016062 Functional Loss - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236912463 chr1:236912466 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80745 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:236912432-236912477
64251 chr20 45357995 45357995 1 + C T rs563376340 45357993 + 45357973 45358013 41 CCCGCCCTCCTGTTTCCAGGCACCATCGGCTTGTCCTGGAC CCCGCCCTCCTGTTTCCAGGCATCATCGGCTTGTCCTGGAC < 41bp 0.721616738598233 0.430369115053637 0.036601633 0.07287642 prediction 0.443233477196466 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45357993 chr20:45357995 nonsynonymous SNV 0.756 0 23 hm5C_associated_SNPs_80750 2 0 1 SND1 POSTAR2 ENCODE chr20:45357990-45358052
64251 chr16 2138528 2138528 1 + C T GBM 2138526 + 2138506 2138546 41 TAGCAAAGCCCCTGCACAGACTCCAGCCGAGCCCACACCTG TAGCAAAGCCCCTGCACAGACTTCAGCCGAGCCCACACCTG < 41bp 0.821640899693178 0.600027262202939 0.93338656 0.35364062 prediction 0.443227274980477 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2138526 chr16:2138528 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_80753 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2138520-2138550
64251 chr1 147091393 147091393 1 + G A UCEC 147091390 + 147091370 147091410 41 TAGCGTGGCTGAAACTGCAGCAGGAGTTTTATGAAGAGAAG TAGCGTGGCTGAAACTGCAGCAGAAGTTTTATGAAGAGAAG < 41bp 0.721612778117568 0.4927678689154 0.6899168 0.36150375 prediction 0.443225556235137 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091390 chr1:147091393 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_80755 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:147091392-147091405
64251 chr11 47345285 47345285 1 + G C KIRP 47345284 + 47345264 47345304 41 GTGTATGAGCGCTGGTGGTACGAGAAGCTCATCAACATGAC GTGTATGAGCGCTGGTGGTACCAGAAGCTCATCAACATGAC < 41bp 0.721609550474125 0.420591834783572 0.31215546 0.22190353 prediction 0.44321910094825 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47345284 chr11:47345285 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_80759 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:47345265-47345301
64251 chr16 2814866 2814866 1 + G A UCEC 2814863 + 2814843 2814883 41 AAGCAGGTCTGGGTCTTCTCCAGGACTTAGAGATGGGTCTG AAGCAGGTCTGGGTCTTCTCCAGAACTTAGAGATGGGTCTG < 41bp 0.77920730811713 0.55759940720859 0.54802614 0.23216358 prediction 0.44321580181708 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814863 chr16:2814866 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80762 0 0 41 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814860-2814880
64251 chr5 149212318 149212318 1 + C T COAD 149212315 + 149212295 149212335 41 TCACCTCGGCACAGTGCTGCCTGCAGGATCGGGGTCTGCAG TCACCTCGGCACAGTGCTGCCTGTAGGATCGGGGTCTGCAG < 41bp 0.739552383985738 0.517952066258768 0.1538203 0.15063143 prediction 0.443200635453941 Functional Loss - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149212315 chr5:149212318 stopgain 0.005 0 24 hm5C_associated_SNPs_80764 0 0 1 FMR1 POSTAR2 ENCODE chr5:149212283-149212356
64251 chr17 66129453 66129453 1 + G A rs146811500 66129450 + 66129430 66129470 41 GGCTGTGTGCTCATCTCTGCCAGGATGTCTGTGCCCTCATG GGCTGTGTGCTCATCTCTGCCAGAATGTCTGTGCCCTCATG < 41bp 0.764473492337107 0.542875539916687 0.90855813 0.4748746 prediction 0.44319590484084 Functional Loss - LINC00674 ENSG00000267023 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr17:66129450 chr17:66129453 . . 0 24 hm5C_associated_SNPs_80766 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:66129428-66129464
64251 chr16 57159811 57159811 1 + G A BLCA 57159808 + 57159788 57159828 41 CAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTTGCAC CAGCCTCCAACGGGAATCCCCTCAACCCTTCCTCTTTGCAC < 41bp 0.721591684090568 0.469871144399364 0.11826268 0.012247443 prediction 0.443183368181135 Functional Loss - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57159808 chr16:57159811 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_80770 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:57159811-57159843
64251 chr6 26158709 26158709 1 + G T LUAD 26158707 + 26158687 26158727 41 CGGCCGTGCGCCTGCTGCTTCCGGGGGAGCTGGCCAAGCAC CGGCCGTGCGCCTGCTGCTTCCTGGGGAGCTGGCCAAGCAC < 41bp 0.907928214241513 0.686337248330008 0.93011296 0.59585005 prediction 0.443181931823009 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158707 chr6:26158709 synonymous SNV . 0 23 hm5C_associated_SNPs_80771 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158660-26158720
64251 chr20 25273148 25273148 1 + C T UCEC 25273145 + 25273125 25273165 41 AACGGGGCCCTCACCATCGGCACCATGGACGGCGCCAACGT AACGGGGCCCTCACCATCGGCACTATGGACGGCGCCAACGT < 41bp 0.721589033536553 0.499885683123042 0.055050164 0.0765686 prediction 0.443178067073107 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25273145 chr20:25273148 synonymous SNV . 0 24 hm5C_associated_SNPs_80773 0 0 1 SRSF1 POSTAR2 ENCODE chr20:25273122-25273275
64251 chr17 4857108 4857108 1 + G A rs202030238 4857105 + 4857085 4857125 41 TGTACCGCCACATCGCAGATCTCGCTGGGAACCCTGACCTC TGTACCGCCACATCGCAGATCTCACTGGGAACCCTGACCTC < 41bp 0.721586439504936 0.462080277054421 0.06339452 0.06505281 prediction 0.443172879009873 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4857105 chr17:4857108 nonsynonymous SNV 0.891 4 24 hm5C_associated_SNPs_80774 0 0 2 PPIG POSTAR2 ENCODE chr17:4857104-4857137
64251 chr6 25983765 25983765 1 + G T LUSC 25983763 + 25983743 25983783 41 CCCTGCTTGTGGGAATTTTTCTGGACTATGAGGCCGGAGTT CCCTGCTTGTGGGAATTTTTCTTGACTATGAGGCCGGAGTT < 41bp 0.894388573036375 0.672803780105149 0.89409304 0.0943709 prediction 0.44316958586245 Functional Loss - TRIM38 ENSG00000112343 CDS Human protein_coding chr6:25983763 chr6:25983765 synonymous SNV . 0 23 hm5C_associated_SNPs_80775 0 0 1 RBM15 POSTAR2 ENCODE chr6:25983698-25983789
64251 chr22 25007141 25007141 1 + G T UCEC 25007138 + 25007118 25007158 41 CTCTGGCTGCCCTCAGCCTCCAAGGAACCTGACAACCATGT CTCTGGCTGCCCTCAGCCTCCAATGAACCTGACAACCATGT < 41bp 0.721583448941525 0.323464661498764 0.2373848 0.05621147 prediction 0.443166897883051 Functional Loss - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25007138 chr22:25007141 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_80776 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:25007108-25007145
64251 chr16 1703113 1703113 1 + C T CESC 1703111 + 1703091 1703131 41 AGCTACAGCCGCGGAACAACCACGCCTGGGCCCGTGTGCAG AGCTACAGCCGCGGAACAACCATGCCTGGGCCCGTGTGCAG < 41bp 0.721580429792773 0.443411834678429 0.29574412 0.24998632 prediction 0.443160859585545 Functional Loss - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1703111 chr16:1703113 synonymous SNV . 0 23 hm5C_associated_SNPs_80780 0 0 3 GRWD1 POSTAR2 ENCODE chr16:1703054-1703158
64251 chr14 21167683 21167683 1 + C T HNSC 21167681 + 21167661 21167701 41 AGGAGACAGGTGGCAGTGATCGCTACTGCAACTTGATGATG AGGAGACAGGTGGCAGTGATCGTTACTGCAACTTGATGATG < 41bp 0.823596345869537 0.602018119655297 0.14386794 0.10187 prediction 0.44315645242848 Functional Loss - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167681 chr14:21167683 synonymous SNV . 0 23 hm5C_associated_SNPs_80781 0 0 3 RPS3 POSTAR2 ENCODE chr14:21167618-21167689
64251 chr1 201858584 201858584 1 + G C LUSC 201858583 + 201858563 201858603 41 CTGCCCGCAGTGCTGGCCGGCGAGGACTGCCTGTGGTACCT CTGCCCGCAGTGCTGGCCGGCCAGGACTGCCTGTGGTACCT < 41bp 0.721573023865634 0.404179368403739 0.8311888 0.30007678 prediction 0.443146047731268 Functional Loss - SHISA4 ENSG00000198892 CDS Human protein_coding chr1:201858583 chr1:201858584 nonsynonymous SNV 0.977 2 22 hm5C_associated_SNPs_80784 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:201858580-201858600
64251 chrX 47070610 47070610 1 + C T LAML 47070608 + 47070588 47070628 41 TCTGACCAGGAGCTGCAGAGCGCCAATGCCTCTGTTGGTGA TCTGACCAGGAGCTGCAGAGCGTCAATGCCTCTGTTGGTGA < 41bp 0.835907191580396 0.614334392380374 0.23605132 0.23544276 prediction 0.443145598400044 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47070608 chrX:47070610 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_80786 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:47070539-47070612
64251 chr8 15517056 15517056 1 + C T SKCM 15517053 + 15517033 15517073 41 TCCTACATTCATGCATTTTCCTCCAAAAGGCAGACCTAAGA TCCTACATTCATGCATTTTCCTCTAAAAGGCAGACCTAAGA < 41bp 0.770140781950338 0.548575402265859 0.9654387 0.9422401 prediction 0.443130759368957 Functional Loss - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15517053 chr8:15517056 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_80792 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:15517031-15517061
64251 chr4 153791999 153791999 1 + A T LUAD 153791995 + 153791975 153792015 41 AGGAAGTGATTTAATTGTTCCTGCAGGTATTCACTGCACTG AGGAAGTGATTTAATTGTTCCTGCTGGTATTCACTGCACTG < 41bp 0.721564992353044 0.397689843483836 0.21380761 0.11362395 prediction 0.443129984706089 Functional Loss - ARFIP1 ENSG00000164144 CDS Human protein_coding chr4:153791995 chr4:153791999 synonymous SNV . 0 25 hm5C_associated_SNPs_80793 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:153791987-153792025
64251 chr9 71687595 71687595 1 + G T GBM 71687592 + 71687572 71687612 41 CCCACGACGGCGTGTCCCTCCATGAGCTGCTGGCCGCAGAG CCCACGACGGCGTGTCCCTCCATTAGCTGCTGGCCGCAGAG < 41bp 0.721564767703285 0.341520012348541 0.39778477 0.08148867 prediction 0.44312953540657 Functional Loss - FXN ENSG00000165060 CDS Human protein_coding chr9:71687592 chr9:71687595 stopgain 0.996 1 24 hm5C_associated_SNPs_80794 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:71687558-71687604
64251 chr11 66276786 66276786 1 + G A UCEC 66276783 + 66276763 66276803 41 GCTGCAAGTGGCCCTCCATTCGTGTGTGTATTTAGGGGCTG GCTGCAAGTGGCCCTCCATTCGTATGTGTATTTAGGGGCTG < 41bp 0.792317840059317 0.570764540960262 0.4697934 0.36646482 prediction 0.443106598198111 Functional Loss - DPP3 ENSG00000256349 splicing Human protein_coding chr11:66276783 chr11:66276786 . 0.009 0 24 hm5C_associated_SNPs_80800 0 0 6 DDX6 POSTAR2 ENCODE chr11:66276779-66276876
64251 chr19 46025715 46025715 1 + G T UCEC 46025713 + 46025693 46025733 41 GGGGTCCCAGCTGCAGCGCACGGAGCAGGGGGAGGACCACC GGGGTCCCAGCTGCAGCGCACGTAGCAGGGGGAGGACCACC < 41bp 0.721552213892936 0.355661083243362 0.9328397 0.4530844 prediction 0.443104427785871 Functional Loss - VASP ENSG00000125753 CDS Human protein_coding chr19:46025713 chr19:46025715 nonsynonymous SNV 0.026 1 23 hm5C_associated_SNPs_80802 0 0 2 METAP2 POSTAR2 ENCODE chr19:46025695-46025730
64251 chr2 97031731 97031731 1 + C T STAD 97031729 + 97031709 97031749 41 AGCACAACAGAATGGTGACACTCCAGAAGCCCAAGGATTAG AGCACAACAGAATGGTGACACTTCAGAAGCCCAAGGATTAG < 41bp 0.721549937363936 0.429572572087696 0.94530994 0.06728917 prediction 0.443099874727872 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97031729 chr2:97031731 nonsynonymous SNV 0.007 0 23 hm5C_associated_SNPs_80807 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:97031713-97031752
64251 chr8 418993 418993 1 + G A rs8049 418990 + 418970 419010 41 CATCACTGAAAGTCAGAGGCCAAGGAAATCATTTCTACTTC CATCACTGAAAGTCAGAGGCCAAAGAAATCATTTCTACTTC < 41bp 0.738700818993381 0.517153106599401 0.3381927 0.29336292 prediction 0.443095424787961 Functional Loss - FBXO25 ENSG00000147364 UTR3 Human protein_coding chr8:418990 chr8:418993 . . 0 24 hm5C_associated_SNPs_80808 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr8:418973-418999
64251 chr4 56734583 56734583 1 + G A UCEC 56734580 + 56734560 56734600 41 TGAATACCAAGAGTTAAATGCAAGAGAAGAACAGGATATCG TGAATACCAAGAGTTAAATGCAAAAGAAGAACAGGATATCG < 41bp 0.730463111311457 0.50891703965372 0.4569084 0.2774461 prediction 0.443092143315475 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56734580 chr4:56734583 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_80809 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:56734565-56734586
64251 chr10 38299703 38299703 1 + G A rs577416013 38299700 + 38299680 38299720 41 CTATGGCGAATGCAACCCGACGAGGGAGTGGGGTAAGCCCC CTATGGCGAATGCAACCCGACGAAGGAGTGGGGTAAGCCCC < 41bp 0.732162683614484 0.510624974097874 0.37039196 0.14128962 prediction 0.443075419033219 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38299700 chr10:38299703 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_80815 0 0 2 DDX3X POSTAR2 ENCODE chr10:38299624-38299717
64251 chr6 26468258 26468258 1 + C T CESC 26468255 + 26468235 26468275 41 AGAAGTGTGAGAAGGTGCCCCTTCAGGCACCTAGGGGAGAG AGAAGTGTGAGAAGGTGCCCCTTTAGGCACCTAGGGGAGAG < 41bp 0.725156649706893 0.50362109150964 0.304235 0.28375793 prediction 0.443071116394506 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468255 chr6:26468258 synonymous SNV . 0 24 hm5C_associated_SNPs_80817 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:26468255-26468279
64251 chr2 235950284 235950284 1 + A C rs3731648 235950283 + 235950263 235950303 41 CGAACTGCCTGGCTAAACCACAGGAAGCTGGCCCGGTCTTG CGAACTGCCTGGCTAAACCACCGGAAGCTGGCCCGGTCTTG < 41bp 0.834898876278862 0.613369608937455 0.83117557 0.7883766 prediction 0.443058534682813 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950283 chr2:235950284 synonymous SNV . 0 22 hm5C_associated_SNPs_80818 0 0 2 GRWD1 POSTAR2 ENCODE chr2:235950251-235950350
64251 chr1 220978575 220978575 1 + C T UCEC 220978572 + 220978552 220978592 41 TTAACCACAGTGGACCCAGACACCGGTGTCATGAGCAGGAA TTAACCACAGTGGACCCAGACACTGGTGTCATGAGCAGGAA < 41bp 0.721527239904541 0.491115571309537 0.08912739 0.07867497 prediction 0.443054479809081 Functional Loss - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220978572 chr1:220978575 synonymous SNV . 0 24 hm5C_associated_SNPs_80820 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:220978548-220978603
64251 chrX 139866216 139866216 1 + G T LUAD 139866214 + 139866194 139866234 41 TCCAAAAAATCCGGGTCTTCCAGGAAATCCGTGTCTTCCAG TCCAAAAAATCCGGGTCTTCCATGAAATCCGTGTCTTCCAG < 41bp 0.89808046140402 0.676555609133884 0.8540397 0.30988342 prediction 0.443049704540271 Functional Loss - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139866214 chrX:139866216 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_80821 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:139866172-139866216
64251 chr15 91478859 91478859 1 + A C LIHC 91478858 + 91478838 91478878 41 GCGCCCTGGCGGCCTACACTCAGGCCCTGGGTCTGGACGCG GCGCCCTGGCGGCCTACACTCCGGCCCTGGGTCTGGACGCG < 41bp 0.822284014324809 0.600767485292131 0.9216077 0.89064825 prediction 0.443033058065356 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91478858 chr15:91478859 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_80826 0 0 1 FXR2 POSTAR2 ENCODE chr15:91478822-91478870
64251 chr2 100007095 100007095 1 + G T STAD 100007092 + 100007072 100007112 41 AGGAGATACAATCATTGTTCCTGGAGTAGAAGGGCCCATTG AGGAGATACAATCATTGTTCCTGTAGTAGAAGGGCCCATTG < 41bp 0.921886257614488 0.700372241337348 0.34604412 0.1868076 prediction 0.443028032554279 Functional Loss - EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007092 chr2:100007095 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_80829 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:100007034-100007112
64251 chr1 93300390 93300390 1 + G A COAD 93300387 + 93300367 93300407 41 TAGTCTGCGCAGCGTATGCACACGAACTGCCAAAATATGGT TAGTCTGCGCAGCGTATGCACACAAACTGCCAAAATATGGT < 41bp 0.753088357261501 0.531584320420447 0.23429728 0.14599857 prediction 0.443008073682107 Functional Loss - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300387 chr1:93300390 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_80834 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:93300323-93300397
64251 chr12 66725241 66725241 1 + C T STAD 66725239 + 66725219 66725259 41 CTCCCTGTAGTCACAGACCACGCCATGACAAATGATGTCAC CTCCCTGTAGTCACAGACCACGTCATGACAAATGATGTCAC < 41bp 0.850449144294337 0.628945218259398 0.035428196 0.100751966 prediction 0.443007852069879 Functional Loss - HELB ENSG00000127311 CDS Human protein_coding chr12:66725239 chr12:66725241 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_80835 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:66725208-66725246
64251 chr7 30651839 30651839 1 + C T BLCA 30651837 + 30651817 30651857 41 TTTTAGAAATGAGATCTCCCCTCGATCTGGACTGATCAGAG TTTTAGAAATGAGATCTCCCCTTGATCTGGACTGATCAGAG < 41bp 0.868148355113709 0.646654913613106 0.7741998 0.035171986 prediction 0.442986883001206 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30651837 chr7:30651839 stopgain 1.000 1 23 hm5C_associated_SNPs_80845 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:30651820-30651840
64251 chr1 166818686 166818686 1 + C T rs61745126 166818684 + 166818664 166818704 41 AGGCGATGCAGCTGAAAGCTCTCGAAATCGCCCAGGAAATG AGGCGATGCAGCTGAAAGCTCTTGAAATCGCCCAGGAAATG < 41bp 0.859967349109537 0.638474240956556 0.8647618 0.21112695 prediction 0.442986216305961 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166818684 chr1:166818686 synonymous SNV . 0 23 hm5C_associated_SNPs_80846 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:166818672-166818710
64251 chr19 10568589 10568589 1 + G A SKCM 10568586 + 10568566 10568606 41 GAAGTGGAGATCCCATCACCCACGATGAAGGAACGAGAAAA GAAGTGGAGATCCCATCACCCACAATGAAGGAACGAGAAAA < 41bp 0.721492098188559 0.479587143269802 0.115157425 0.07383677 prediction 0.442984196377118 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10568586 chr19:10568589 synonymous SNV . 0 24 hm5C_associated_SNPs_80847 0 0 2 DDX24 POSTAR2 ENCODE chr19:10568562-10568681
64251 chr13 48612039 48612039 1 - G A SKCM 48612041 - 48612021 48612061 41 CTCGCGTCCGCGGCTGCTCACCCGAACTCCAGATGACCTCC CTCGCGTCCGCGGCTGCTCACCTGAACTCCAGATGACCTCC < 41bp 0.779667669689285 0.558181904882898 0.123058856 0.036275774 prediction 0.442971529612775 Functional Loss - NUDT15 ENSG00000136159 CDS Human protein_coding chr13:48612041 chr13:48612039 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_80850 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:48612031-48612069
64251 chr5 64859225 64859225 1 + A T KIRC 64859221 + 64859201 64859241 41 CCGGAAAAAACAGAACTCAGCGAAAGAGAGCTGGCAGTAGC CCGGAAAAAACAGAACTCAGCGAATGAGAGCTGGCAGTAGC < 41bp 0.765403884613432 0.543922387834043 0.7569647 0.5737424 prediction 0.442962993558779 Functional Loss - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64859221 chr5:64859225 stopgain 0.013 0 25 hm5C_associated_SNPs_80852 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:64859213-64859261
64251 chr6 31526047 31526047 1 + C T SKCM 31526045 + 31526025 31526065 41 AGCCAGGAGGGCGCAGGAGGCTCTAGGGGACCGAGAACCCA AGCCAGGAGGGCGCAGGAGGCTTTAGGGGACCGAGAACCCA < 41bp 0.741417018727209 0.519935818186139 0.90402746 0.78674793 prediction 0.44296240108214 Functional Loss - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31526045 chr6:31526047 synonymous SNV . 0 23 hm5C_associated_SNPs_80854 0 0 2 PPIG POSTAR2 ENCODE chr6:31526013-31526071
64251 chr7 117824239 117824239 1 + G C rs2896242 117824238 + 117824218 117824258 41 CTTTCAGTTCTGCTTGCTGTCGGCACCGCTGCGTTACCCGG CTTTCAGTTCTGCTTGCTGTCCGCACCGCTGCGTTACCCGG < 41bp 0.72407395839516 0.502595223023719 0.691463 0.037896395 prediction 0.442957470742882 Functional Loss - LSM8 ENSG00000128534 UTR5 Human protein_coding chr7:117824238 chr7:117824239 . . 0 22 hm5C_associated_SNPs_80857 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:117824220-117824240
64251 chr9 96416716 96416716 1 + A C KIRP 96416715 + 96416695 96416735 41 GGGGAGAAGACCTTCTATCTCATCAGGCCGGCCTCGGCCAA GGGGAGAAGACCTTCTATCTCCTCAGGCCGGCCTCGGCCAA < 41bp 0.818340492432986 0.59686573101883 0.21997681 0.17334232 prediction 0.442949522828312 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96416715 chr9:96416716 nonsynonymous SNV 0.977 4 22 hm5C_associated_SNPs_80860 0 0 2 YBX3 POSTAR2 ENCODE chr9:96416708-96416773
64251 chr16 67942930 67942930 1 + G A STAD 67942927 + 67942907 67942947 41 GTACAGGGCCAAGTTTGACCCACGTGTTACAGCTAAGTATG GTACAGGGCCAAGTTTGACCCACATGTTACAGCTAAGTATG < 41bp 0.721465971230925 0.476353989310093 0.21364358 0.0704633 prediction 0.44293194246185 Functional Loss - PSKH1 ENSG00000159792 CDS Human protein_coding chr16:67942927 chr16:67942930 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_80864 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:67942920-67942940
64251 chr18 29122725 29122725 1 + A C SARC 29122724 + 29122704 29122744 41 CACTGAAACCACGAAGACCGCAAGGGCCACAGGGGCTTCCA CACTGAAACCACGAAGACCGCCAGGGCCACAGGGGCTTCCA < 41bp 0.834795245921332 0.613331399826392 0.8570243 0.8879907 prediction 0.442927692189881 Functional Loss - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29122724 chr18:29122725 synonymous SNV . 0 22 hm5C_associated_SNPs_80865 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:29122716-29122774
64251 chr16 2816537 2816537 1 + G A UCEC 2816534 + 2816514 2816554 41 ATCTCGCACATCTCCAGTAACTCGAAGAAGGTCCCGCTCTC ATCTCGCACATCTCCAGTAACTCAAAGAAGGTCCCGCTCTC < 41bp 0.77440590279495 0.552943449117878 0.77923316 0.6530912 prediction 0.442924907354143 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2816534 chr16:2816537 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_80866 0 0 27 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2816520-2816580
64251 chr19 1913115 1913115 1 + G T LUAD 1913112 + 1913092 1913132 41 TCCAGGTGTTCCGCGGGGTGCTGGAGGAGCAGTGCCGCTGG TCCAGGTGTTCCGCGGGGTGCTGTAGGAGCAGTGCCGCTGG < 41bp 0.921565144562294 0.70010394581432 0.9139702 0.8992164 prediction 0.442922397495948 Functional Loss - ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913112 chr19:1913115 stopgain 0.609 1 24 hm5C_associated_SNPs_80870 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:1913094-1913129
64251 chr11 67376074 67376074 1 + G T SARC 67376072 + 67376052 67376092 41 GGTACAAGACAAAGGAGATCCTGCTGAAGGGGCCCGACTGG GGTACAAGACAAAGGAGATCCTTCTGAAGGGGCCCGACTGG < 41bp 0.721458587963642 0.378313849348924 0.2533756 0.09683296 prediction 0.442917175927284 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376072 chr11:67376074 synonymous SNV . 0 23 hm5C_associated_SNPs_80872 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:67376038-67376076
64251 chr17 4789241 4789241 1 + G A BLCA 4789238 + 4789218 4789258 41 TCTCTAGGAATCACAGCCATCGAGATGGCAGAGGGAGCCCC TCTCTAGGAATCACAGCCATCGAAATGGCAGAGGGAGCCCC < 41bp 0.73331030489444 0.511852850313607 0.5590542 0.29567263 prediction 0.442914909161666 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4789238 chr17:4789241 synonymous SNV . 0 24 hm5C_associated_SNPs_80876 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4789212-4789242
64251 chr19 3543359 3543359 1 + G A rs377153853 3543356 + 3543336 3543376 41 TGGTACACAGGCCTGACCAACTCGGACGCCTGGGAAGCCTG TGGTACACAGGCCTGACCAACTCAGACGCCTGGGAAGCCTG < 41bp 0.799561404523113 0.578104722622509 0.4401557 0.2937395 prediction 0.442913363801208 Functional Loss - C19orf71 ENSG00000183397 CDS Human protein_coding chr19:3543356 chr19:3543359 synonymous SNV . 0 24 hm5C_associated_SNPs_80877 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:3543340-3543360
64251 chr19 55901374 55901374 1 + G A rs375302086 55901371 + 55901351 55901391 41 ACGTTAGTAGATGGCCCCTTCTCGTGAGGCCTCTCCCCTGG ACGTTAGTAGATGGCCCCTTCTCATGAGGCCTCTCCCCTGG < 41bp 0.792280764916823 0.570826286063461 0.03800884 0.050952405 prediction 0.442908957706724 Functional Loss - RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901371 chr19:55901374 . . 0 24 hm5C_associated_SNPs_80881 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:55901364-55901390
64251 chr12 113727975 113727975 1 + C T UCEC 113727972 + 113727952 113727992 41 GCCTACCGCTGGCGCAACCACACCGTGGGCAACAGGACCGT GCCTACCGCTGGCGCAACCACACTGTGGGCAACAGGACCGT < 41bp 0.745509875350015 0.524056474084378 0.1452131 0.10203186 prediction 0.442906802531274 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113727972 chr12:113727975 synonymous SNV . 0 24 hm5C_associated_SNPs_80882 0 0 1 ZNF622 POSTAR2 ENCODE chr12:113727932-113727991
64251 chr19 577972 577972 1 + C T SARC 577970 + 577950 577990 41 CACGCCACCTACCACCAGCACGCGGCCAGCACCATCTCCAT CACGCCACCTACCACCAGCACGTGGCCAGCACCATCTCCAT < 41bp 0.76383598104053 0.542382908679404 0.20268062 0.19697008 prediction 0.442906144722254 Functional Loss - BSG ENSG00000172270 CDS Human protein_coding chr19:577970 chr19:577972 nonsynonymous SNV 0.229 2 23 hm5C_associated_SNPs_80883 0 0 2 CSTF2T POSTAR2 ENCODE chr19:577943-578022
64251 chr16 48395618 48395618 1 - C T STAD 48395621 - 48395601 48395641 41 ATTGACTTGGGAAGCGACTCCTCGATCTATTCATGAAGGAA ATTGACTTGGGAAGCGACTCCTCAATCTATTCATGAAGGAA < 41bp 0.765333695015884 0.543884162427562 0.6118923 0.62258744 prediction 0.442899065176644 Functional Loss - SIAH1 ENSG00000102910;ENSG00000196470 CDS Human other chr16:48395621 chr16:48395618 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_80886 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:48395603-48395624
64251 chr20 36361357 36361357 1 + G A UCEC 36361354 + 36361334 36361374 41 GCGTCGGAAACAAACTGGTACTCGAGAACGCGGCCGCTATC GCGTCGGAAACAAACTGGTACTCAAGAACGCGGCCGCTATC < 41bp 0.769384063636378 0.547936163040906 0.88211167 0.84407103 prediction 0.442895801190943 Functional Loss - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36361354 chr20:36361357 nonsynonymous SNV 0.814 2 24 hm5C_associated_SNPs_80887 0 0 11 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:36361340-36361360
64251 chr19 58102303 58102303 1 + G A UCEC 58102300 + 58102280 58102320 41 TCAACACCGAAGAATTCACACTGGAGCAAAGCCTTATGAGT TCAACACCGAAGAATTCACACTGAAGCAAAGCCTTATGAGT < 41bp 0.786199256471778 0.56475328284402 0.07416597 0.025206745 prediction 0.442891947255516 Functional Loss - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58102300 chr19:58102303 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_80888 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58102277-58102303
64251 chr19 13084353 13084353 1 + G C BRCA 13084349 + 13084329 13084369 41 GCTCGCAAGCGTTGGGCACCCGTGGTCCTGTGGTGTCTCAC GCTCGCAAGCGTTGGGCACCCGTGCTCCTGTGGTGTCTCAC < 41bp 0.873501658626237 0.652055812746773 0.4556719 0.21063462 prediction 0.442891691758928 Functional Loss - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084349 chr19:13084353 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_80889 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:13084338-13084376
64251 chr22 35804518 35804518 1 + C T STAD 35804516 + 35804496 35804536 41 AGCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAGACAC AGCTGCCTGATGCAGTCCCCCATGGGGAGATGCCCAGACAC < 41bp 0.806887324266146 0.585441988099946 0.05877617 0.13949305 prediction 0.442890672332401 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35804516 chr22:35804518 synonymous SNV . 0 23 hm5C_associated_SNPs_80890 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:35804500-35804520
64251 chr17 62523291 62523291 1 + T C BLCA 62523290 + 62523270 62523310 41 TGACCATAAAGAAGAAAATACTGGAAATGAGGAGGTAGAGG TGACCATAAAGAAGAAAATACCGGAAATGAGGAGGTAGAGG < 41bp 0.779741909830371 0.558298895399719 0.3555346 0.3069641 prediction 0.442886028861303 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62523290 chr17:62523291 synonymous SNV . 0 22 hm5C_associated_SNPs_80892 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:62523269-62523295
64251 chr1 160394937 160394937 1 + A C rs17380127 160394933 + 160394913 160394953 41 CTTGGAGCGATACTTGGCGGCTGGACCTACCATCCAGTACC CTTGGAGCGATACTTGGCGGCTGGCCCTACCATCCAGTACC < 41bp 0.721438704534485 0.318188092581388 0.3415162 0.26716778 prediction 0.44287740906897 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160394933 chr1:160394937 synonymous SNV . 0 25 hm5C_associated_SNPs_80893 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:160394925-160394948
64251 chr6 155578117 155578117 1 - C A LUSC 155578120 - 155578100 155578140 41 TCAGACTGACTGTCAAGGGACTGGTGACGGATCTGCGCCTT TCAGACTGACTGTCAAGGGACTGTTGACGGATCTGCGCCTT < 41bp 0.721433419193697 0.415549897069178 0.09081137 0.029815793 prediction 0.442866838387393 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155578120 chr6:155578117 nonsynonymous SNV 0.984 3 24 hm5C_associated_SNPs_80897 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:155578102-155578126
64251 chr6 133789852 133789852 1 + G A SKCM 133789849 + 133789829 133789869 41 TCAGTTGCAGGAATCTCTCCCAGGACTGACTAACCAACCAG TCAGTTGCAGGAATCTCTCCCAGAACTGACTAACCAACCAG < 41bp 0.745224851199302 0.523791844325756 0.9198433 0.4824304 prediction 0.442866013747092 Functional Loss - EYA4 ENSG00000112319 CDS Human protein_coding chr6:133789849 chr6:133789852 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_80899 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:133789830-133789860
64251 chr1 26581973 26581973 1 + G T UCEC 26581970 + 26581950 26581990 41 CAGCAGTGGGCCATGAAAGACAAGAAGAGGCGAGGAAGTTT CAGCAGTGGGCCATGAAAGACAATAAGAGGCGAGGAAGTTT < 41bp 0.721432312954318 0.327475933340002 0.08202469 0.15970299 prediction 0.442864625908636 Functional Loss - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26581970 chr1:26581973 stopgain 0.563 1 24 hm5C_associated_SNPs_80900 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:26581952-26581974
64251 chr22 50319193 50319193 1 + C T rs191387531 50319191 + 50319171 50319211 41 AACGGAAGATGCCTGTGTGCCGCCGGCAGAGGCTGGTGAGT AACGGAAGATGCCTGTGTGCCGTCGGCAGAGGCTGGTGAGT < 41bp 0.808295988123688 0.586867761537854 0.23162046 0.21847308 prediction 0.442856453171668 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50319191 chr22:50319193 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_80901 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50319178-50319205
64251 chr20 49197873 49197873 1 + C T rs16995309 49197870 + 49197850 49197890 41 TCGAGGTGCCCAGGCTGCCTCCCCAGCCAAAGGGGAGCCGT TCGAGGTGCCCAGGCTGCCTCCCTAGCCAAAGGGGAGCCGT < 41bp 0.721418823841223 0.494018139813038 0.11122823 0.062026113 prediction 0.442837647682446 Functional Loss - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197870 chr20:49197873 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_80909 0 0 3 GRWD1 POSTAR2 ENCODE chr20:49197822-49197904
64251 chr6 27783059 27783059 1 + C T READ 27783057 + 27783037 27783077 41 GCGTATCGCCGGAGAAGCGTCACGCCTGGCGCATTACAACA GCGTATCGCCGGAGAAGCGTCATGCCTGGCGCATTACAACA < 41bp 0.733955493516201 0.512543564404391 0.036134154 0.105076134 prediction 0.44282385822362 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783057 chr6:27783059 nonsynonymous SNV 0.491 0 23 hm5C_associated_SNPs_80912 0 0 1 GRWD1 POSTAR2 ENCODE chr6:27783035-27783064
64251 chr19 11015663 11015663 1 + G A GBM 11015660 + 11015640 11015680 41 TGTCTTTAAGTGCTCAGTGTCCCGAGAGACAGAGTGCAGCC TGTCTTTAAGTGCTCAGTGTCCCAAGAGACAGAGTGCAGCC < 41bp 0.721409833238555 0.481138167257558 0.11093074 0.02122292 prediction 0.442819666477111 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11015660 chr19:11015663 nonsynonymous SNV 0.158 1 24 hm5C_associated_SNPs_80916 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:11015656-11015688
64251 chr17 16335315 16335315 1 + G A PAAD 16335312 + 16335292 16335332 41 TGAGCCAGGAGGCTTGGCGCCCCGAAGCTCCTACAGGCCCC TGAGCCAGGAGGCTTGGCGCCCCAAAGCTCCTACAGGCCCC < 41bp 0.797791040964118 0.576386658049395 0.31116134 0.48953152 prediction 0.442808765829446 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335312 chr17:16335315 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_80919 0 0 2 SND1 POSTAR2 ENCODE chr17:16335278-16335321
64251 chr7 101183320 101183320 1 + G A SKCM 101183317 + 101183297 101183337 41 GTGCCACGACAGAGAAGGCCCACGGGCCCAGCCGGTGAGTG GTGCCACGACAGAGAAGGCCCACAGGCCCAGCCGGTGAGTG < 41bp 0.781180365350508 0.559777006193859 0.08848584 0.04993725 prediction 0.442806718313297 Functional Loss - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101183317 chr7:101183320 synonymous SNV . 0 24 hm5C_associated_SNPs_80921 0 0 1 SND1 POSTAR2 ENCODE chr7:101183303-101183330
64251 chr19 14580607 14580607 1 + G A UCEC 14580604 + 14580584 14580624 41 TGCTGGGCCTACAGTTTCTTCACGAACACAAGATCGTCTAC TGCTGGGCCTACAGTTTCTTCACAAACACAAGATCGTCTAC < 41bp 0.792751802199271 0.571352469194881 0.07614043 0.041421354 prediction 0.442798666008779 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14580604 chr19:14580607 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_80923 0 0 2 METAP2 POSTAR2 ENCODE chr19:14580570-14580610
64251 chr5 1221326 1221326 1 + G A COAD 1221323 + 1221303 1221343 41 CCCAACATCTTCTGGCAAGTCACGTGGCGCGTGGTCAGCCC CCCAACATCTTCTGGCAAGTCACATGGCGCGTGGTCAGCCC < 41bp 0.785069008277574 0.563674932685547 0.111842155 0.10535559 prediction 0.442788151184053 Functional Loss - SLC6A19 ENSG00000174358 CDS Human protein_coding chr5:1221323 chr5:1221326 synonymous SNV . 0 24 hm5C_associated_SNPs_80926 0 0 1 SND1 POSTAR2 ENCODE chr5:1221268-1221424
64251 chr1 246829080 246829080 1 + C T COAD 246829077 + 246829057 246829097 41 TTTCCTCAGTGTTGGAGGAACTGCATTATACTGCACTTTCG TTTCCTCAGTGTTGGAGGAACTGTATTATACTGCACTTTCG < 41bp 0.72709316359506 0.50571008614063 0.8557093 0.4829602 prediction 0.44276615490886 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246829077 chr1:246829080 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_80934 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:246829067-246829088
64251 chr10 79793551 79793551 1 + A C rs3740254 79793550 + 79793530 79793570 41 GGTCAGCCTCGTGGCGCGCCCACGCCCCCACGCCGGCTCTT GGTCAGCCTCGTGGCGCGCCCCCGCCCCCACGCCGGCTCTT < 41bp 0.777648682327802 0.556266043957472 0.7206766 0.7129808 prediction 0.44276527674066 Functional Loss - RPS24 ENSG00000138326 UTR5 Human protein_coding chr10:79793550 chr10:79793551 . . 0 22 hm5C_associated_SNPs_80935 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:79793531-79793585
64251 chr20 2985712 2985712 1 + C T UCS 2985709 + 2985689 2985729 41 CTTAACCTTTCAGGCTCTCCCTGCATGTCCTATCCAGGCCA CTTAACCTTTCAGGCTCTCCCTGTATGTCCTATCCAGGCCA < 41bp 0.738793690062729 0.517411162162111 0.42720574 0.25209737 prediction 0.442765055801235 Functional Loss - PTPRA ENSG00000132670 CDS Human protein_coding chr20:2985709 chr20:2985712 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_80936 0 0 1 U2AF2 POSTAR2 ENCODE chr20:2985690-2985739
64251 chr19 49675017 49675017 1 + G T rs61732831 49675015 + 49674995 49675035 41 CCAAAGGGGACCTTGAGGTCCTGCAGGCCCAGGTATGACAC CCAAAGGGGACCTTGAGGTCCTTCAGGCCCAGGTATGACAC < 41bp 0.721376829540535 0.384015855585805 0.28096867 0.1835339 prediction 0.442753659081069 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49675015 chr19:49675017 synonymous SNV . 0 23 hm5C_associated_SNPs_80942 2 0 2 DDX24 POSTAR2 ENCODE chr19:49674989-49675029
64251 chr6 43402429 43402429 1 + G T LIHC 43402426 + 43402406 43402446 41 GTGGGAGCAGGCACTGGGAGCCCGAGTAGAGGCCTGCCGGG GTGGGAGCAGGCACTGGGAGCCCTAGTAGAGGCCTGCCGGG < 41bp 0.721369787737696 0.316473596964156 0.3988815 0.105558366 prediction 0.442739575475392 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43402426 chr6:43402429 nonsynonymous SNV 0.929 3 24 hm5C_associated_SNPs_80948 0 0 2 BUD13 POSTAR2 ENCODE chr6:43402367-43402438
64251 chrX 14915345 14915345 1 + T C rs147869193 14915344 + 14915324 14915364 41 GATGTTTGACCTGTCAGAAACTGGAATAAATAGCATTGTAA GATGTTTGACCTGTCAGAAACCGGAATAAATAGCATTGTAA < 41bp 0.779009221481058 0.557651243023258 0.3010007 0.33483756 prediction 0.442715956915599 Functional Loss - MOSPD2 ENSG00000130150 CDS Human protein_coding chrX:14915344 chrX:14915345 synonymous SNV . 0 22 hm5C_associated_SNPs_80956 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:14915338-14915379
64251 chr16 46962905 46962905 1 + C T rs115493492 46962903 + 46962883 46962923 41 ATCAACTTCCTGGAGAAGTACGCGTGAGGACGCCTGAGCCC ATCAACTTCCTGGAGAAGTACGTGTGAGGACGCCTGAGCCC < 41bp 0.721354311705286 0.457988138482125 0.15431911 0.14106604 prediction 0.442708623410572 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46962903 chr16:46962905 nonsynonymous SNV 0.038 3 23 hm5C_associated_SNPs_80958 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:46962874-46962906
64251 chr1 2323302 2323302 1 + G T rs565130284 2323300 + 2323280 2323320 41 AAGTGCTCGCTGCAGCTTCCCGGAGCCGGAGCGCAGCGCCT AAGTGCTCGCTGCAGCTTCCCGTAGCCGGAGCGCAGCGCCT < 41bp 0.89602579325063 0.674671580393474 0.9016229 0.7111804 prediction 0.442708425714312 Functional Loss - RER1 ENSG00000157916 UTR5 Human protein_coding chr1:2323300 chr1:2323302 . . 0 23 hm5C_associated_SNPs_80959 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:2323280-2323340
64251 chr14 76948420 76948420 1 + G C SKCM 76948416 + 76948396 76948436 41 ATACAAGCGACGGCTGGACTCAGAGAGCAGCCCATACCTGA ATACAAGCGACGGCTGGACTCAGACAGCAGCCCATACCTGA < 41bp 0.721348353927148 0.415287468403381 0.9189963 0.23988461 prediction 0.442696707854296 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76948416 chr14:76948420 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_80961 0 0 2 LIN28B POSTAR2 ENCODE chr14:76948359-76948442
64251 chr16 30938951 30938951 1 + C T UCEC 30938949 + 30938929 30938969 41 CCCCAACTGCTGGGAGTGCCCTCGCTGCACCCAGGAAGGCC CCCCAACTGCTGGGAGTGCCCTTGCTGCACCCAGGAAGGCC < 41bp 0.721340979752874 0.458428207311436 0.23939985 0.16909072 prediction 0.442681959505747 Functional Loss - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30938949 chr16:30938951 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_80963 0 0 2 EIF3H POSTAR2 ENCODE chr16:30938928-30938974
64251 chr1 211486899 211486899 1 + C T COAD 211486897 + 211486877 211486917 41 CGTCCAACACTGCCTGCTGCCCCGGCTCTTCACCGGCAGCC CGTCCAACACTGCCTGCTGCCCTGGCTCTTCACCGGCAGCC < 41bp 0.72133825380164 0.457470313117497 0.020748407 0.010098159 prediction 0.44267650760328 Functional Loss - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486897 chr1:211486899 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_80964 0 0 1 RBM15 POSTAR2 ENCODE chr1:211486846-211486901
64251 chr1 211486900 211486900 1 + G A COAD 211486897 + 211486877 211486917 41 CGTCCAACACTGCCTGCTGCCCCGGCTCTTCACCGGCAGCC CGTCCAACACTGCCTGCTGCCCCAGCTCTTCACCGGCAGCC < 41bp 0.72133825380164 0.487767699053954 0.020748407 0.053522766 prediction 0.44267650760328 Functional Loss - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486897 chr1:211486900 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_80965 0 0 1 RBM15 POSTAR2 ENCODE chr1:211486846-211486901
64251 chr15 90167877 90167877 1 + A C rs368030032 90167876 + 90167856 90167896 41 GGCTACCCAGGCCCTGGTCTCAGGAGTGATTGGCATGCATC GGCTACCCAGGCCCTGGTCTCCGGAGTGATTGGCATGCATC < 41bp 0.831403772174501 0.610067789461888 0.9556409 0.93711126 prediction 0.442671965425224 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90167876 chr15:90167877 synonymous SNV . 0 22 hm5C_associated_SNPs_80967 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr15:90167851-90167879
64251 chr2 170606000 170606000 1 + G T COAD 170605998 + 170605978 170606018 41 CGGCGGACAAACTACAATCACAGAATGCTATGACCCTGAAC CGGCGGACAAACTACAATCACATAATGCTATGACCCTGAAC < 41bp 0.721335359957538 0.400461603044653 0.2802344 0.17904496 prediction 0.442670719915075 Functional Loss - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170605998 chr2:170606000 stopgain 0.994 1 23 hm5C_associated_SNPs_80968 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr2:170605961-170606015
64251 chr1 246810956 246810956 1 + C T HNSC 246810953 + 246810933 246810973 41 AGAACAATGAATTAAATGAGCTGCAGCAGCCTGATCTTACA AGAACAATGAATTAAATGAGCTGTAGCAGCCTGATCTTACA < 41bp 0.737234124784383 0.515899888824558 0.10678455 0.06134832 prediction 0.44266847191965 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810953 chr1:246810956 stopgain 0.084 0 24 hm5C_associated_SNPs_80970 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:246810920-246810958
64251 chr16 57416628 57416628 1 + C T BLCA 57416626 + 57416606 57416646 41 GTCTCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGCAG GTCTCTGTGGTCCCTGTCTCCTTAGAAGGGACCCCCAGCAG < 41bp 0.822309593654586 0.600979963448403 0.29082805 0.36012042 prediction 0.442659260412366 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416626 chr16:57416628 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_80973 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416571-57416641
64251 chr13 24234628 24234628 1 + C T LGG 24234625 + 24234605 24234645 41 CGCCGTGACTCAGTGCAGACCTGCGGTAAGTTCAGCAGGGA CGCCGTGACTCAGTGCAGACCTGTGGTAAGTTCAGCAGGGA < 41bp 0.725833670859088 0.504505798593328 0.41858047 0.39971828 prediction 0.44265574453152 Functional Loss - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24234625 chr13:24234628 synonymous SNV . 0 24 hm5C_associated_SNPs_80975 0 0 4 RPS3 POSTAR2 ENCODE chr13:24234588-24234630
64251 chr7 150763709 150763709 1 + T C COAD 150763708 + 150763688 150763728 41 CCCCCTGCCCAAAGCCCAGCCTGGGCACCGCAGCTACAACC CCCCCTGCCCAAAGCCCAGCCCGGGCACCGCAGCTACAACC < 41bp 0.773142151663353 0.551819141084288 0.24577424 0.59878576 prediction 0.442646021158129 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150763708 chr7:150763709 synonymous SNV . 0 22 hm5C_associated_SNPs_80976 0 0 3 DDX24 POSTAR2 ENCODE chr7:150763663-150763732
64251 chr15 59347961 59347961 1 + G A UCEC 59347958 + 59347938 59347978 41 TGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTT TGCAAGTCGGCCACAGGAGCCACAGAACCGCAGTAGGATTT < 41bp 0.721310680763981 0.487919899926097 0.20048222 0.12663662 prediction 0.442621361527962 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59347958 chr15:59347961 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_80984 0 0 1 IGF2BP1 POSTAR2 ENCODE chr15:59347901-59347975
64251 chr2 220396518 220396518 1 + G A SKCM 220396515 + 220396495 220396535 41 GGGAAGTGTTACACCTTCAACGCGGACCCGCGGAGCTCGCT GGGAAGTGTTACACCTTCAACGCAGACCCGCGGAGCTCGCT < 41bp 0.790750797477561 0.569445198932049 0.86180013 0.3990711 prediction 0.442611197091025 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220396515 chr2:220396518 synonymous SNV . 0 24 hm5C_associated_SNPs_80988 0 0 1 NONO POSTAR2 ENCODE chr2:220396512-220396561
64251 chr16 66918558 66918558 1 + G C LUSC 66918557 + 66918537 66918577 41 ATTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGCCTG ATTCCCCAGTGGAGGACCGGCCAGGTGTAGCCTCCTGCCTG < 41bp 0.88207736214524 0.66077399132061 0.8971572 0.893518 prediction 0.442606741649259 Functional Loss - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918557 chr16:66918558 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_80990 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:66918540-66918560
64251 chr1 76226875 76226875 1 + G T CESC 76226873 + 76226853 76226893 41 AACTAGCTAGAATGAGTTACCAGAGAGCAGCTTGGGAGGTT AACTAGCTAGAATGAGTTACCATAGAGCAGCTTGGGAGGTT < 41bp 0.721303223394751 0.394740629941583 0.8637093 0.7402414 prediction 0.442606446789501 Functional Loss - ACADM ENSG00000117054 CDS Human protein_coding chr1:76226873 chr1:76226875 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_80991 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:76226824-76226878
64251 chr6 33652667 33652667 1 + G A SKCM 33652664 + 33652644 33652684 41 CCAAGAACGAGAAGATCTTCCAGGAGAGCATCGGCCTGGCC CCAAGAACGAGAAGATCTTCCAGAAGAGCATCGGCCTGGCC < 41bp 0.742308298636536 0.521006262833338 0.75584775 0.30515292 prediction 0.442604071606397 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33652664 chr6:33652667 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_80992 0 0 2 GRWD1 POSTAR2 ENCODE chr6:33652645-33652702
64251 chr14 68036668 68036668 1 + G T SARC 68036665 + 68036645 68036685 41 CCCTCCTGCCCTTGTTTCCCCTGGGTCTTTCTCTGGCCTGG CCCTCCTGCCCTTGTTTCCCCTGTGTCTTTCTCTGGCCTGG < 41bp 0.721297507104208 0.317994470768978 0.8593477 0.23939237 prediction 0.442595014208416 Functional Loss - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68036665 chr14:68036668 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_80994 0 0 1 PPIG POSTAR2 ENCODE chr14:68036664-68036728
64251 chr4 38104684 38104684 1 + C T COAD 38104682 + 38104662 38104702 41 CTGAGCAATTCCACCTTAAACACCAGTTTCCCAGCAAACAG CTGAGCAATTCCACCTTAAACATCAGTTTCCCAGCAAACAG < 41bp 0.72129634004057 0.427953292482298 0.2239598 0.28723717 prediction 0.442592680081139 Functional Loss - TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38104682 chr4:38104684 synonymous SNV . 0 23 hm5C_associated_SNPs_80995 0 0 1 LIN28B POSTAR2 ENCODE chr4:38104617-38104711
64251 chr18 8813172 8813172 1 + G A LUSC 8813169 + 8813149 8813189 41 AGGTGGAACTTCTCGACCGCCTGGACAGAGATCGGCAGGAG AGGTGGAACTTCTCGACCGCCTGAACAGAGATCGGCAGGAG < 41bp 0.762939854709377 0.541649374238274 0.40681496 0.23427206 prediction 0.442580960942206 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8813169 chr18:8813172 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_80998 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr18:8813160-8813180
64251 chr16 15489972 15489972 1 + C T UCEC 15489970 + 15489950 15489990 41 TGGCTGCGCCTGCTGGAGCGCGCGCTCCCGGGCCGAGCGCC TGGCTGCGCCTGCTGGAGCGCGTGCTCCCGGGCCGAGCGCC < 41bp 0.805284387021434 0.583994165211177 0.44454893 0.3961448 prediction 0.442580443620514 Functional Loss - MPV17L ENSG00000156968;ENSG00000261130 CDS Human other chr16:15489970 chr16:15489972 nonsynonymous SNV 0.247 1 23 hm5C_associated_SNPs_80999 0 0 3 DDX3X POSTAR2 ENCODE chr16:15489947-15490004
64251 chr11 76507596 76507596 1 + G T LUAD 76507593 + 76507573 76507613 41 CTGCAGAGCGTCAGCGTGGGCCAGGATGTGCGGTGCCGGCG CTGCAGAGCGTCAGCGTGGGCCATGATGTGCGGTGCCGGCG < 41bp 0.72128690077753 0.326074528237294 0.7676976 0.5862115 prediction 0.44257380155506 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507593 chr11:76507596 nonsynonymous SNV 0.735 1 24 hm5C_associated_SNPs_81002 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:76507582-76507611
64251 chr3 128614208 128614208 1 + G A UCEC 128614205 + 128614185 128614225 41 AGACTAGGGGAGATCATCAGCATGGATGGGTCCATCACTGT AGACTAGGGGAGATCATCAGCATAGATGGGTCCATCACTGT < 41bp 0.721283526972559 0.480276085454966 0.34391466 0.17407048 prediction 0.442567053945118 Functional Loss - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128614205 chr3:128614208 nonsynonymous SNV 0.023 1 24 hm5C_associated_SNPs_81006 0 0 7 BUD13 POSTAR2 ENCODE chr3:128614198-128614257
64251 chrX 154002935 154002935 1 + C T UCEC 154002932 + 154002912 154002952 41 TCTGGACAAGCATGGGAAGCCCACAGACAGCACACCTGCCA TCTGGACAAGCATGGGAAGCCCATAGACAGCACACCTGCCA < 41bp 0.722949087468147 0.501668387079369 0.22768378 0.2969891 prediction 0.442561400777556 Functional Loss - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154002932 chrX:154002935 nonsynonymous SNV 0.420 2 24 hm5C_associated_SNPs_81010 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:154002878-154002941
64251 chr1 898773 898773 1 + C T COAD 898771 + 898751 898791 41 TCCTACGACCCCGTGACTAACACGTGGCAGCCGGAGGTGTC TCCTACGACCCCGTGACTAACATGTGGCAGCCGGAGGTGTC < 41bp 0.721280604208293 0.455933969018818 0.17534432 0.15298513 prediction 0.442561208416586 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898771 chr1:898773 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_81011 0 0 1 LSM11 POSTAR2 ENCODE chr1:898725-898775
64251 chr15 45003745 45003745 1 + A C BLCA 45003741 + 45003721 45003761 41 GAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGGC GAAGCTGACAGCATTCGGGCCGAGCTGTCTCGCTCCGTGGC < 41bp 0.796421397126425 0.575144411818916 0.5334552 0.29471457 prediction 0.442553970615017 Functional Loss - B2M ENSG00000166710 CDS Human protein_coding chr15:45003741 chr15:45003745 nonsynonymous SNV 0.089 1 25 hm5C_associated_SNPs_81015 0 0 33 PTBP1 POSTAR2 GSE42701,GSM1048186 chr15:45003740-45003760
64251 chr17 33316655 33316655 1 + G T LUSC 33316652 + 33316632 33316672 41 ACACGAAGACCCAGATCATCCAGGACTTCCTTCGGAAAGGC ACACGAAGACCCAGATCATCCAGTACTTCCTTCGGAAAGGC < 41bp 0.930472873376191 0.709203405670297 0.37320235 0.16559523 prediction 0.442538935411788 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33316652 chr17:33316655 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_81021 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:33316631-33316660
64251 chr19 58005406 58005406 1 + A T rs201370124 58005402 + 58005382 58005422 41 GGGAATGTGGGAAGTTTTTTCGCCACAACTCCAGTCTTTTT GGGAATGTGGGAAGTTTTTTCGCCTCAACTCCAGTCTTTTT < 41bp 0.88774816287065 0.666481448155632 0.02090329 0.03455329 prediction 0.442533429430036 Functional Loss - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58005402 chr19:58005406 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_81023 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:58005403-58005430
64251 chr12 81624881 81624881 1 + G T LUSC 81624879 + 81624859 81624899 41 TTTCAGGACTCTGGAAGAATCAGGAAGCATTCAAGCATTTA TTTCAGGACTCTGGAAGAATCATGAAGCATTCAAGCATTTA < 41bp 0.721260427216474 0.384159729348167 0.44665578 0.112198085 prediction 0.442520854432948 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81624879 chr12:81624881 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_81029 0 0 2 BUD13 POSTAR2 ENCODE chr12:81624831-81624889
64251 chr12 81624882 81624882 1 + G A SKCM 81624879 + 81624859 81624899 41 TTTCAGGACTCTGGAAGAATCAGGAAGCATTCAAGCATTTA TTTCAGGACTCTGGAAGAATCAGAAAGCATTCAAGCATTTA < 41bp 0.721260427216474 0.496078392305185 0.44665578 0.20270434 prediction 0.442520854432948 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81624879 chr12:81624882 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_81030 0 0 2 BUD13 POSTAR2 ENCODE chr12:81624831-81624889
64251 chr19 50040426 50040426 1 + C T rs112559991 50040424 + 50040404 50040444 41 AGCTGACAGCCTTCCTGCACCCCGAGGAGTTCCCTCACATG AGCTGACAGCCTTCCTGCACCCTGAGGAGTTCCCTCACATG < 41bp 0.721259863869052 0.444979995585603 0.037176102 0.12808946 prediction 0.442519727738104 Functional Loss - RCN3 ENSG00000142552 CDS Human protein_coding chr19:50040424 chr19:50040426 synonymous SNV . 0 23 hm5C_associated_SNPs_81031 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:50040387-50040430
64251 chr1 192780130 192780130 1 + G A UCEC 192780127 + 192780107 192780147 41 TCAGATGGTCTTGCTGCATTCAGGGCTTTTTTAAAGTCGGA TCAGATGGTCTTGCTGCATTCAGAGCTTTTTTAAAGTCGGA < 41bp 0.755490389467255 0.534234280142174 0.90314305 0.87808365 prediction 0.442512218650162 Functional Loss - RGS2 ENSG00000116741 CDS Human protein_coding chr1:192780127 chr1:192780130 synonymous SNV . 0 24 hm5C_associated_SNPs_81034 0 0 1 U2AF1 POSTAR2 ENCODE chr1:192780082-192780157
64251 chr10 121429563 121429563 1 + A T rs140594879 121429559 + 121429539 121429579 41 GCAGCGATTCCGAACTGAGGCGGCAGCAGCGGCTCCTCAGA GCAGCGATTCCGAACTGAGGCGGCTGCAGCGGCTCCTCAGA < 41bp 0.89749454980121 0.676244134155688 0.9000081 0.9144417 prediction 0.442500831291044 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121429559 chr10:121429563 synonymous SNV . 0 25 hm5C_associated_SNPs_81035 5 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:121429544-121429579
64251 chr2 234079726 234079726 1 + G A rs371650284 234079723 + 234079703 234079743 41 GTTTCAGAGGAGGAAGAAATCACGTTTGCCCCAACCTACCG GTTTCAGAGGAGGAAGAAATCACATTTGCCCCAACCTACCG < 41bp 0.762517195384101 0.541270968302203 0.8208178 0.5253382 prediction 0.442492454163796 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234079723 chr2:234079726 synonymous SNV . 0 24 hm5C_associated_SNPs_81038 0 0 2 BUD13 POSTAR2 ENCODE chr2:234079723-234079763
64251 chr1 110587676 110587676 1 + C T STAD 110587674 + 110587654 110587694 41 TGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTG TGGGGCTGCCCAGGCCAATCCATGAAAGCATCAAGACTCTG < 41bp 0.861331827747098 0.640088915322766 0.60392696 0.5882031 prediction 0.442485824848662 Functional Loss - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110587674 chr1:110587676 synonymous SNV . 0 23 hm5C_associated_SNPs_81041 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:110587660-110587680
64251 chr15 74315475 74315475 1 + G T LUAD 74315472 + 74315452 74315492 41 GAGCTGCTGGAGGCTGTGGACGCGCGGTACCAGCGCGACTA GAGCTGCTGGAGGCTGTGGACGCTCGGTACCAGCGCGACTA < 41bp 0.721239760627151 0.367098953737624 0.8691372 0.4228285 prediction 0.442479521254302 Functional Loss - PML ENSG00000140464 CDS Human protein_coding chr15:74315472 chr15:74315475 synonymous SNV . 0 24 hm5C_associated_SNPs_81043 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr15:74315446-74315478
64251 chr15 74315474 74315474 1 + C T STAD 74315472 + 74315452 74315492 41 GAGCTGCTGGAGGCTGTGGACGCGCGGTACCAGCGCGACTA GAGCTGCTGGAGGCTGTGGACGTGCGGTACCAGCGCGACTA < 41bp 0.721239760627151 0.49662314357623 0.8691372 0.8437587 prediction 0.442479521254302 Functional Loss - PML ENSG00000140464 CDS Human protein_coding chr15:74315472 chr15:74315474 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_81044 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr15:74315446-74315478
64251 chr1 10166309 10166309 1 + G A rs146983740 10166306 + 10166286 10166326 41 AGTTTCTGGAGCTCTGTTCCCGTGATGGGCCCGTCTCTTGC AGTTTCTGGAGCTCTGTTCCCGTAATGGGCCCGTCTCTTGC < 41bp 0.785815038829254 0.564575602327956 0.4010133 0.22929454 prediction 0.442478873002595 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10166306 chr1:10166309 synonymous SNV . 0 24 hm5C_associated_SNPs_81046 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:10166307-10166320
64251 chr5 137680715 137680715 1 + C T SKCM 137680712 + 137680692 137680732 41 GCTTCCTGTGCCCCCTGCCCCTCCATCCAAGAGGCACTGCC GCTTCCTGTGCCCCCTGCCCCTCTATCCAAGAGGCACTGCC < 41bp 0.764159003678662 0.542921215840769 0.96443176 0.93997395 prediction 0.442475575675785 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680712 chr5:137680715 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81048 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:137680697-137680735
64251 chr11 61541602 61541602 1 + G A UCEC 61541599 + 61541579 61541619 41 CGCCCGAGGGCCTCAAGCCCCTCGACTGCTTCTATCTGAAG CGCCCGAGGGCCTCAAGCCCCTCAACTGCTTCTATCTGAAG < 41bp 0.721233378591953 0.478409070825741 0.2672876 0.12726864 prediction 0.442466757183907 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61541599 chr11:61541602 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_81053 0 0 1 GRWD1 POSTAR2 ENCODE chr11:61541533-61541625
64251 chr17 40639346 40639346 1 + C T SKCM 40639343 + 40639323 40639363 41 GCAGAGGTCTGGTGCCCTGTCACCGACCTTGACTCCATCCA GCAGAGGTCTGGTGCCCTGTCACTGACCTTGACTCCATCCA < 41bp 0.734339726954003 0.51310670482024 0.15664363 0.11912915 prediction 0.442466044267526 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40639343 chr17:40639346 synonymous SNV . 0 24 hm5C_associated_SNPs_81054 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:40639316-40639372
64251 chrX 101857592 101857592 1 + T C STAD 101857591 + 101857571 101857611 41 GAAAATATATGCTCCTGGTTCTGGACTGGAGAAGAGCCTAG GAAAATATATGCTCCTGGTTCCGGACTGGAGAAGAGCCTAG < 41bp 0.721230054630594 0.485071959602518 0.14797068 0.17537123 prediction 0.442460109261188 Functional Loss - ARMCX5 ENSG00000125962 CDS Human protein_coding chrX:101857591 chrX:101857592 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_81056 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:101857578-101857599
64251 chr14 105965220 105965220 1 + G T LUAD 105965218 + 105965198 105965238 41 GACTACAGGGACAGTGTCGGCAGGAACTGGCCAGGCTGGTG GACTACAGGGACAGTGTCGGCATGAACTGGCCAGGCTGGTG < 41bp 0.898342515747544 0.677117106534221 0.5962075 0.14959112 prediction 0.442450818426645 Functional Loss - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105965218 chr14:105965220 nonsynonymous SNV 0.688 2 23 hm5C_associated_SNPs_81058 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:105965200-105965220
64251 chr19 45912406 45912406 1 + G A rs2336219 45912403 + 45912383 45912423 41 AGACGAAGAAAGAAAAACAGCAAGATGCCACAGTGGAGCCA AGACGAAGAAAGAAAAACAGCAAAATGCCACAGTGGAGCCA < 41bp 0.796687204388747 0.57546589874141 0.48222518 0.30607527 prediction 0.442442611294675 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45912403 chr19:45912406 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_81061 0 0 1 ZNF622 POSTAR2 ENCODE chr19:45912399-45912478
64251 chr19 8327196 8327196 1 + G C rs12891 8327192 + 8327172 8327212 41 CTCTGGGCAACTGGACAGATCTGGGAGCCAGCAGCTGGATG CTCTGGGCAACTGGACAGATCTGGCAGCCAGCAGCTGGATG < 41bp 0.803577607245208 0.582360753001339 0.8963331 0.4092268 prediction 0.442433708487739 Functional Loss - CERS4 ENSG00000090661 UTR3 Human protein_coding chr19:8327192 chr19:8327196 . . 0 25 hm5C_associated_SNPs_81063 0 0 3 LARP4 POSTAR2 ENCODE chr19:8327153-8327213
64251 chr9 132565530 132565530 1 + G T LUSC 132565528 + 132565508 132565548 41 GGCTCCGGGGCGCGGCGGCGCTGGCGCTGCTGCTGGCGGCC GGCTCCGGGGCGCGGCGGCGCTTGCGCTGCTGCTGGCGGCC < 41bp 0.908014965200217 0.686798145588908 0.8429061 0.44172117 prediction 0.442433639222618 Functional Loss - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132565528 chr9:132565530 synonymous SNV . 0 23 hm5C_associated_SNPs_81064 0 0 5 DDX3X POSTAR2 ENCODE chr9:132565476-132565563
64251 chr4 16228840 16228840 1 + G T UCEC 16228838 + 16228818 16228858 41 AGGGGCCGCGGCCGGACCGGCAGAGTTTCAAGGGCTGGCGC AGGGGCCGCGGCCGGACCGGCATAGTTTCAAGGGCTGGCGC < 41bp 0.721212825263134 0.371989239489628 0.8888252 0.24164209 prediction 0.442425650526268 Functional Loss - TAPT1-AS1 ENSG00000263327 ncRNA_exonic Human antisense chr4:16228838 chr4:16228840 . . 0 23 hm5C_associated_SNPs_81066 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr4:16228840-16228860
64251 chr16 86544562 86544562 1 + G T LUSC 86544559 + 86544539 86544579 41 TGGACCATCGACCCGGCCAGCGAGTTCATGTTCGAGGAGGG TGGACCATCGACCCGGCCAGCGATTTCATGTTCGAGGAGGG < 41bp 0.721208489072483 0.329705725392029 0.35257286 0.2387684 prediction 0.442416978144966 Functional Loss - FOXF1 ENSG00000103241 CDS Human protein_coding chr16:86544559 chr16:86544562 nonsynonymous SNV 0.982 4 24 hm5C_associated_SNPs_81069 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:86544562-86544563
64251 chr7 98988806 98988806 1 + C T SARC 98988804 + 98988784 98988824 41 CAGCTCTCTCCCCTCAGCGTCGCGACTCTGGCCTCTGAAAC CAGCTCTCTCCCCTCAGCGTCGTGACTCTGGCCTCTGAAAC < 41bp 0.721206727759025 0.439321549985904 0.11431062 0.18611345 prediction 0.442413455518049 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98988804 chr7:98988806 nonsynonymous SNV 0.100 0 23 hm5C_associated_SNPs_81072 0 0 8 EFTUD2 POSTAR2 ENCODE chr7:98988718-98988842
64251 chr19 14023192 14023192 1 + G A CESC 14023189 + 14023169 14023209 41 CCAGCCTGTGCATGAGAGACCCGGATGAGGATGAGGAGGAG CCAGCCTGTGCATGAGAGACCCGAATGAGGATGAGGAGGAG < 41bp 0.721200650559471 0.477292969043938 0.27817374 0.13184127 prediction 0.442401301118942 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14023189 chr19:14023192 nonsynonymous SNV 0.501 3 24 hm5C_associated_SNPs_81074 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:14023180-14023201
64251 chr2 24150215 24150215 1 + G C rs114294740 24150214 + 24150194 24150234 41 CAGACTAATCAGGACGAGTTCGGGCGTGGAATTGGGCCTGA CAGACTAATCAGGACGAGTTCCGGCGTGGAATTGGGCCTGA < 41bp 0.851818151008949 0.630627176407956 0.884861 0.7566806 prediction 0.442381949201986 Functional Loss - ATAD2B ENSG00000173960 UTR5 Human protein_coding chr2:24150214 chr2:24150215 . . 0 22 hm5C_associated_SNPs_81079 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:24150209-24150230
64251 chr19 10217225 10217225 1 + G C BRCA 10217224 + 10217204 10217244 41 CAGGCGCAGCTCCGCAACCTCGAGGCCTATGCCGCGAACCC CAGGCGCAGCTCCGCAACCTCCAGGCCTATGCCGCGAACCC < 41bp 0.887204460363254 0.666013653801223 0.935823 0.9049833 prediction 0.442381613124061 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10217224 chr19:10217225 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_81080 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10217204-10217232
64251 chr9 71867813 71867813 1 + C T UCEC 71867811 + 71867791 71867831 41 GACCCTGGCACGCCCCAGCACACGAGGTAAGGGCTGCCTAG GACCCTGGCACGCCCCAGCACATGAGGTAAGGGCTGCCTAG < 41bp 0.839472202906172 0.618282036280139 0.51013404 0.6097037 prediction 0.442380333252066 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71867811 chr9:71867813 nonsynonymous SNV 0.020 0 23 hm5C_associated_SNPs_81081 0 0 3 GPKOW POSTAR2 ENCODE chr9:71867771-71867838
64251 chr11 7631629 7631629 1 + G T LUAD 7631627 + 7631607 7631647 41 TGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAA TGGAGAAGGAGCAGAGAGAGCATGAGGAGAAGCAGAGAAAA < 41bp 0.789344066784939 0.568155153746653 0.79262364 0.5066979 prediction 0.442377826076573 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7631627 chr11:7631629 nonsynonymous SNV 0.983 0 23 hm5C_associated_SNPs_81082 0 0 1 GRWD1 POSTAR2 ENCODE chr11:7631537-7631654
64251 chr9 127076235 127076235 1 + G A CESC 127076232 + 127076212 127076252 41 TGATGGACGCCAAGGCGAGGCAGGACTGTGTCAAGGAGATC TGATGGACGCCAAGGCGAGGCAGAACTGTGTCAAGGAGATC < 41bp 0.792183669323839 0.57100095809364 0.059899777 0.041027516 prediction 0.442365422460397 Functional Loss - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127076232 chr9:127076235 nonsynonymous SNV 0.961 3 24 hm5C_associated_SNPs_81086 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:127076232-127076261
64251 chr8 99961626 99961626 1 + G A UCEC 99961623 + 99961603 99961643 41 AGGACTGGGTAGCCCCATCTCGGGCCTCAGTAAATTGACTC AGGACTGGGTAGCCCCATCTCGGACCTCAGTAAATTGACTC < 41bp 0.781352636332075 0.560176354435167 0.9338671 0.923321 prediction 0.442352563793817 Functional Loss - OSR2 ENSG00000164920 CDS Human protein_coding chr8:99961623 chr8:99961626 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_81090 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:99961614-99961661
64251 chr12 109945425 109945425 1 + G A STAD 109945422 + 109945402 109945442 41 TGTGGGCATTTATCTGTGAGCTCGGGCCCCACGGAGGGTTA TGTGGGCATTTATCTGTGAGCTCAGGCCCCACGGAGGGTTA < 41bp 0.757175896995009 0.53600816054444 0.1460537 0.11627042 prediction 0.44233547290114 Functional Loss - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109945422 chr12:109945425 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_81092 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:109945407-109945434
64251 chr16 680652 680652 1 + G C rs182167586 680648 + 680628 680668 41 CCTGGCCCGGGGGACCCAGGCTGTGGTCAGCCACGCTCTGC CCTGGCCCGGGGGACCCAGGCTGTCGTCAGCCACGCTCTGC < 41bp 0.721164815640757 0.435880108828775 0.4118101 0.31063598 prediction 0.442329631281515 Functional Loss - WFIKKN1 ENSG00000127578 upstream Human protein_coding chr16:680648 chr16:680652 . . 0 25 hm5C_associated_SNPs_81093 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:680617-680662
64251 chr8 56864630 56864630 1 + G A SKCM 56864627 + 56864607 56864647 41 TGGGGGCTATTACATCTCTCCACGAATCACTTTTCCCTGTA TGGGGGCTATTACATCTCTCCACAAATCACTTTTCCCTGTA < 41bp 0.763167956646723 0.542004031433188 0.16651347 0.10511738 prediction 0.44232785042707 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56864627 chr8:56864630 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_81095 0 0 1 UCHL5 POSTAR2 ENCODE chr8:56864608-56864658
64251 chr9 119460833 119460833 1 + G A LUSC 119460830 + 119460810 119460850 41 AGAGCTCACTGCCAGCTTGCCTCGGGAGCTCACCCTGCAAG AGAGCTCACTGCCAGCTTGCCTCAGGAGCTCACCCTGCAAG < 41bp 0.797427109572375 0.576266279711816 0.3835872 0.020841748 prediction 0.442321659721119 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460830 chr9:119460833 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_81097 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:119460824-119460843
64251 chr20 37378711 37378711 1 + G A CESC 37378708 + 37378688 37378728 41 TGTGTGCAACCCACTGTATTCACGGCAAATGATGTCTGAGC TGTGTGCAACCCACTGTATTCACAGCAAATGATGTCTGAGC < 41bp 0.771470642391256 0.550316993526764 0.30975285 0.11429182 prediction 0.442307297728984 Functional Loss - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37378708 chr20:37378711 nonsynonymous SNV 0.896 5 24 hm5C_associated_SNPs_81102 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr20:37378710-37378729
64251 chr22 42276872 42276872 1 + C T SKCM 42276870 + 42276850 42276890 41 TACGCCTGGTGCGCTGGCTGCTCAAGAAAGTCTTCCAGTGC TACGCCTGGTGCGCTGGCTGCTTAAGAAAGTCTTCCAGTGC < 41bp 0.721151100862083 0.432933920099615 0.09384942 0.0801982 prediction 0.442302201724166 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276870 chr22:42276872 stopgain 0.997 0 23 hm5C_associated_SNPs_81104 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr22:42276836-42276872
64251 chr7 128434547 128434547 1 + G A rs78589071 128434544 + 128434524 128434564 41 AAGCACCGGGGACTGAGCCTCACGGAGACAGAGCTGGAGGA AAGCACCGGGGACTGAGCCTCACAGAGACAGAGCTGGAGGA < 41bp 0.780144420666855 0.558995113688079 0.85908926 0.5679146 prediction 0.442298613957553 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128434544 chr7:128434547 synonymous SNV . 0 24 hm5C_associated_SNPs_81105 0 0 12 AGGF1 POSTAR2 ENCODE chr7:128434476-128434554
64251 chr3 122404049 122404049 1 + G A SKCM 122404046 + 122404026 122404066 41 TTTCAGTTCGGCAGAAGGTTCTGGAGAGAAAAAATCATGAG TTTCAGTTCGGCAGAAGGTTCTGAAGAGAAAAAATCATGAG < 41bp 0.733255245531974 0.512113707050718 0.16144574 0.13183445 prediction 0.442283076962511 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122404046 chr3:122404049 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_81106 0 0 1 U2AF2 POSTAR2 ENCODE chr3:122404003-122404072
64251 chr3 139062952 139062952 1 + A T UCEC 139062948 + 139062928 139062968 41 GGAACGGGTCTGTTTCCGGGCTCGAATCCAGCCCTGGCACG GGAACGGGTCTGTTTCCGGGCTCGTATCCAGCCCTGGCACG < 41bp 0.879843628386547 0.658710727285415 0.23814729 0.19357818 prediction 0.442265802202264 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062948 chr3:139062952 synonymous SNV . 0 25 hm5C_associated_SNPs_81111 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:139062952-139062953
64251 chr12 57919368 57919368 1 + G A HNSC 57919365 + 57919345 57919385 41 TAGCAGCCCCCGTTTCCTCCCAAGGGGCAATGCCCCCTCTC TAGCAGCCCCCGTTTCCTCCCAAAGGGCAATGCCCCCTCTC < 41bp 0.814281611275561 0.593151875492542 0.94708914 0.7449046 prediction 0.442259471566039 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919365 chr12:57919368 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_81112 0 0 8 DDX59 POSTAR2 ENCODE chr12:57919343-57919404
64251 chr2 98262630 98262630 1 + G C CESC 98262629 + 98262609 98262649 41 CGGCCCCAGTGGCGCGGCCGCGATGCGCTCCATGGCATCTG CGGCCCCAGTGGCGCGGCCGCCATGCGCTCCATGGCATCTG < 41bp 0.721128663646844 0.418096447819915 0.57486653 0.636261 prediction 0.442257327293688 Functional Loss - COX5B ENSG00000135940 CDS Human protein_coding chr2:98262629 chr2:98262630 synonymous SNV . 0 22 hm5C_associated_SNPs_81113 0 0 17 TARDBP POSTAR2 DRA001158,DRS012386 chr2:98262604-98262643
64251 chr7 28547316 28547316 1 + C T UCEC 28547314 + 28547294 28547334 41 AGCTGGACTGCTCCCTGGAGCACGAGTTCAGGAAGGCTCAG AGCTGGACTGCTCCCTGGAGCATGAGTTCAGGAAGGCTCAG < 41bp 0.826803627877867 0.605678519061604 0.34368223 0.35769236 prediction 0.442250217632525 Functional Loss - CREB5 ENSG00000146592 CDS Human protein_coding chr7:28547314 chr7:28547316 synonymous SNV . 0 23 hm5C_associated_SNPs_81117 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:28547293-28547317
64251 chr11 66241285 66241285 1 + G A LGG 66241282 + 66241262 66241302 41 AATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTTCTCCGA AATGGAGTCCTGGTGATGCACCCAGCAGGCGGCTTCTCCGA < 41bp 0.801350797053321 0.580227478351238 0.19916597 0.083351195 prediction 0.442246637404166 Functional Loss - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66241282 chr11:66241285 synonymous SNV . 0 24 hm5C_associated_SNPs_81119 0 0 1 PPIG POSTAR2 ENCODE chr11:66241202-66241342
64251 chr3 63981841 63981841 1 + C T COAD 63981838 + 63981818 63981858 41 CAGTCAGGGAGGGGCCCCCCCACCGGGAGCCCTGCTGAATC CAGTCAGGGAGGGGCCCCCCCACTGGGAGCCCTGCTGAATC < 41bp 0.721121879553452 0.492944954800661 0.32420632 0.2214835 prediction 0.442243759106905 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63981838 chr3:63981841 synonymous SNV . 0 24 hm5C_associated_SNPs_81120 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:63981840-63981860
64251 chr4 110765489 110765489 1 + G A rs80108392 110765486 + 110765466 110765506 41 TGTAAGCTCCTCAAGCACAGCTCGTGCTTCTGTTTGTGCAC TGTAAGCTCCTCAAGCACAGCTCATGCTTCTGTTTGTGCAC < 41bp 0.721120884916707 0.49965175709463 0.0512895 0.09489417 prediction 0.442241769833414 Functional Loss - RRH ENSG00000180245 UTR3 Human protein_coding chr4:110765486 chr4:110765489 . . 0 24 hm5C_associated_SNPs_81122 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:110765485-110765530
64251 chr21 48078737 48078737 1 + T C UCEC 48078736 + 48078716 48078756 41 GGTCATTTGGCCCACCATGGCTGCGTTGCACCTTGTGCCCT GGTCATTTGGCCCACCATGGCCGCGTTGCACCTTGTGCCCT < 41bp 0.744169727648966 0.523051032428773 0.102478236 0.16673228 prediction 0.442237390440386 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48078736 chr21:48078737 synonymous SNV 0.091 0 22 hm5C_associated_SNPs_81124 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:48078731-48078770
64251 chr3 44844408 44844408 1 + G T UCEC 44844405 + 44844385 44844425 41 TAGAGCCTGTGAAAAGAGCTCAAGAAATGGATGCCCAGACC TAGAGCCTGTGAAAAGAGCTCAATAAATGGATGCCCAGACC < 41bp 0.721111947455212 0.336059365355851 0.27350822 0.056779206 prediction 0.442223894910424 Functional Loss - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44844405 chr3:44844408 stopgain 1.000 1 24 hm5C_associated_SNPs_81126 0 0 1 DDX24 POSTAR2 ENCODE chr3:44844398-44844428
64251 chr6 158365035 158365035 1 + C T rs577 158365033 + 158365013 158365053 41 AAGAACAGACCAGCGCCCTTCCCGACTACATCCGAAACTTC AAGAACAGACCAGCGCCCTTCCTGACTACATCCGAAACTTC < 41bp 0.775378256830819 0.554270860328133 0.34411955 0.14304665 prediction 0.442214793005372 Functional Loss - SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158365033 chr6:158365035 . . 0 23 hm5C_associated_SNPs_81127 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:158365003-158365048
64251 chr8 27995360 27995360 1 + G A CESC 27995357 + 27995337 27995377 41 TGACCTGGTTGAATTGGTGGCTCGGATCCTAGCCCTCGTGC TGACCTGGTTGAATTGGTGGCTCAGATCCTAGCCCTCGTGC < 41bp 0.721101413889011 0.476663126591195 0.67600226 0.38053933 prediction 0.442202827778022 Functional Loss - ELP3 ENSG00000134014 CDS Human protein_coding chr8:27995357 chr8:27995360 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_81129 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:27995347-27995368
64251 chr8 22473023 22473023 1 + A T STAD 22473019 + 22472999 22473039 41 GTGGTGTACCTGCCGGATGTCTGGACCATCATGCCTACTTT GTGGTGTACCTGCCGGATGTCTGGTCCATCATGCCTACTTT < 41bp 0.895094487114362 0.673994597246828 0.20100066 0.45243773 prediction 0.442199779735068 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22473019 chr8:22473023 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_81131 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:22473001-22473026
64251 chr17 48539808 48539808 1 + G A BLCA 48539805 + 48539785 48539825 41 CCAGATCTGACCACAGTCATCTCGGTGGATGCCCCTTTGCC CCAGATCTGACCACAGTCATCTCAGTGGATGCCCCTTTGCC < 41bp 0.806822528376877 0.5857264237744 0.83071494 0.55182415 prediction 0.442192209204954 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48539805 chr17:48539808 synonymous SNV . 0 24 hm5C_associated_SNPs_81135 0 0 2 GRWD1 POSTAR2 ENCODE chr17:48539798-48539888
64251 chr17 78968447 78968447 1 + G T LUAD 78968444 + 78968424 78968464 41 GGATCGCCCAGCAGCTGGAGCGCGAGCGCGCCCTGGCCCGG GGATCGCCCAGCAGCTGGAGCGCTAGCGCGCCCTGGCCCGG < 41bp 0.931355201472104 0.710262174728872 0.6396574 0.4297769 prediction 0.442186053486464 Functional Loss - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78968444 chr17:78968447 stopgain 0.738 1 24 hm5C_associated_SNPs_81139 0 0 2 BUD13 POSTAR2 ENCODE chr17:78968443-78968484
64251 chr20 31600616 31600616 1 + A T LUSC 31600612 + 31600592 31600632 41 TGATTACTACCCTGCAGGATCCGGATTCTGAATGTCCATGT TGATTACTACCCTGCAGGATCCGGTTTCTGAATGTCCATGT < 41bp 0.721091658995494 0.408841896072648 0.34469903 0.15318662 prediction 0.442183317990987 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31600612 chr20:31600616 nonsynonymous SNV 0.916 1 25 hm5C_associated_SNPs_81140 0 0 3 SF3A3 POSTAR2 ENCODE chr20:31600547-31600623
64251 chr14 94712791 94712791 1 + A C COAD 94712787 + 94712767 94712807 41 GAACTCATGAGAAGCTACTTCAGAAATATGCCTGCCTGCCA GAACTCATGAGAAGCTACTTCAGACATATGCCTGCCTGCCA < 41bp 0.721091130800835 0.302946807963253 0.35953984 0.26352775 prediction 0.442182261601669 Functional Loss - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94712787 chr14:94712791 nonsynonymous SNV 0.982 1 25 hm5C_associated_SNPs_81142 0 0 1 GRWD1 POSTAR2 ENCODE chr14:94712705-94712828
64251 chr13 97491100 97491100 1 + G T rs569810317 97491097 + 97491077 97491117 41 TGGCAGAGGTGCAGAAATTTCCAGAGGACTGGCCTAGCTAT TGGCAGAGGTGCAGAAATTTCCATAGGACTGGCCTAGCTAT < 41bp 0.721086128586284 0.479952694914247 0.9343811 0.85141313 prediction 0.442172257172568 Functional Loss - HS6ST3 ENSG00000185352;ENSG00000235137 intergenic Human other chr13:97491097 chr13:97491100 . . 0 24 hm5C_associated_SNPs_81145 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:97491088-97491110
64251 chr22 44564703 44564703 1 + G A rs532431244 44564700 + 44564680 44564720 41 TCCCCACCCCACCCCTACCTCACGCCTGCCCCACCCCCTGC TCCCCACCCCACCCCTACCTCACACCTGCCCCACCCCCTGC < 41bp 0.721083272598755 0.466790172025743 0.12052256 0.033533275 prediction 0.44216654519751 Functional Loss - PARVB ENSG00000188677 UTR3 Human protein_coding chr22:44564700 chr22:44564703 . . 0 24 hm5C_associated_SNPs_81148 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr22:44564676-44564736
64251 chr7 102040030 102040030 1 + G A STAD 102040027 + 102040007 102040047 41 GGGCCGGCAGTGGAGAGTTCCACGTGTACAGACATCTGCGC GGGCCGGCAGTGGAGAGTTCCACATGTACAGACATCTGCGC < 41bp 0.782596032757429 0.56151674063365 0.5362221 0.39184433 prediction 0.442158584247559 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102040027 chr7:102040030 nonsynonymous SNV 0.984 3 24 hm5C_associated_SNPs_81150 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:102040020-102040040
64251 chr3 179069792 179069792 1 + C T GBM 179069790 + 179069770 179069810 41 CATCATTGGTGAGGTGCTATCTCGGAGACACATGAAGGTGG CATCATTGGTGAGGTGCTATCTTGGAGACACATGAAGGTGG < 41bp 0.84859393089865 0.627522652744438 0.7449462 0.7808332 prediction 0.442142556308424 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179069790 chr3:179069792 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_81153 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr3:179069762-179069796
64251 chr5 135396580 135396580 1 + A C SKCM 135396579 + 135396559 135396599 41 GCCGAGCCTGACATCATGGCCACAAATGGCGTGGTCCATGT GCCGAGCCTGACATCATGGCCCCAAATGGCGTGGTCCATGT < 41bp 0.721070072135576 0.458997918408449 0.03562057 0.03406194 prediction 0.442140144271153 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135396579 chr5:135396580 nonsynonymous SNV 0.917 4 22 hm5C_associated_SNPs_81155 0 0 3 RPS3 POSTAR2 ENCODE chr5:135396579-135396626
64251 chr1 6649172 6649172 1 + C T SKCM 6649170 + 6649150 6649190 41 GGCGGCCTGGCCTCCCAGCTCCCCGGCCAGAGACTGTGTGC GGCGGCCTGGCCTCCCAGCTCCTCGGCCAGAGACTGTGTGC < 41bp 0.721057061181923 0.472009149232654 0.15106553 0.23235902 prediction 0.442114122363846 Functional Loss - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6649170 chr1:6649172 nonsynonymous SNV 0.101 2 23 hm5C_associated_SNPs_81160 0 0 3 DDX55 POSTAR2 ENCODE chr1:6649127-6649175
64251 chr6 348127 348127 1 + G A HNSC 348124 + 348104 348144 41 CTGGCCGGGGTCTCCAGGAGCGTGACACTGGTGATCGCATA CTGGCCGGGGTCTCCAGGAGCGTAACACTGGTGATCGCATA < 41bp 0.721056829270776 0.480243416820732 0.81865 0.85447127 prediction 0.442113658541551 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348124 chr6:348127 synonymous SNV . 0 24 hm5C_associated_SNPs_81161 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:348121-348151
64251 chr1 110775743 110775743 1 + C T rs572967682 110775741 + 110775721 110775761 41 GGAAAATCTCCCATGCGACCCTCGGGGCCCAGAGCCATCTG GGAAAATCTCCCATGCGACCCTTGGGGCCCAGAGCCATCTG < 41bp 0.759781736239781 0.538742767481413 0.16120109 0.014721781 prediction 0.442077937516736 Functional Loss - KCNC4 ENSG00000116396 UTR3 Human protein_coding chr1:110775741 chr1:110775743 . . 0 23 hm5C_associated_SNPs_81168 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:110775733-110775783
64251 chr7 92020649 92020649 1 + C T SKCM 92020646 + 92020626 92020666 41 TCCTGCAGACTCACCAGAAGCTCCAAGGCGCAGGTAAAAAG TCCTGCAGACTCACCAGAAGCTCTAAGGCGCAGGTAAAAAG < 41bp 0.762126489119022 0.541088396301905 0.92806685 0.85575503 prediction 0.442076185634234 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92020646 chr7:92020649 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_81169 0 0 1 PRPF8 POSTAR2 ENCODE chr7:92020628-92020694
64251 chr3 197505281 197505281 1 + G T UCEC 197505278 + 197505258 197505298 41 AAGCGGGAGCAAAGTGACGTCAAGAAAGTTCCTAAAGGTGT AAGCGGGAGCAAAGTGACGTCAATAAAGTTCCTAAAGGTGT < 41bp 0.721033522668603 0.345732158610896 0.095718235 0.05982709 prediction 0.442067045337206 Functional Loss - FYTTD1 ENSG00000122068 CDS Human protein_coding chr3:197505278 chr3:197505281 nonsynonymous SNV 0.888 4 24 hm5C_associated_SNPs_81171 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:197505267-197505303
64251 chr16 58538110 58538110 1 + C T BLCA 58538107 + 58538087 58538127 41 TTCGAGGACATGCAGGAGATCACCAAGCACTTTGTGGTGTG TTCGAGGACATGCAGGAGATCACTAAGCACTTTGTGGTGTG < 41bp 0.75992983507548 0.538901823306446 0.40022248 0.18739286 prediction 0.442056023538067 Functional Loss - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58538107 chr16:58538110 synonymous SNV . 0 24 hm5C_associated_SNPs_81174 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:58538100-58538120
64251 chr11 65161866 65161866 1 + A C STAD 65161865 + 65161845 65161885 41 GCGTGCAGCTTGGGCCCTACCAGCCCGGCCGGCCGGCAGCC GCGTGCAGCTTGGGCCCTACCCGCCCGGCCGGCCGGCAGCC < 41bp 0.814479006007164 0.593457561302036 0.7860866 0.23814231 prediction 0.442042889410257 Functional Loss - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65161865 chr11:65161866 nonsynonymous SNV 0.700 0 22 hm5C_associated_SNPs_81177 0 0 1 PRPF8 POSTAR2 ENCODE chr11:65161846-65161924
64251 chr4 7002978 7002978 1 + G A LGG 7002975 + 7002955 7002995 41 GCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGA GCAACGAGTTAAATATCACCCACAGTGAGTGGCCTGCATGA < 41bp 0.791948931482841 0.570933597631033 0.22931603 0.06612286 prediction 0.442030667703617 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7002975 chr4:7002978 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_81182 0 0 11 LIN28A POSTAR2 GSE44616,GSM1087848 chr4:7002955-7002978
64251 chrX 70586259 70586259 1 + G T LUAD 70586256 + 70586236 70586276 41 GGACAGCGACGAAGATTCCGCTGGAGGCGGCCCATTTTCTT GGACAGCGACGAAGATTCCGCTGTAGGCGGCCCATTTTCTT < 41bp 0.721014237441438 0.352971712623635 0.22593841 0.21395189 prediction 0.442028474882876 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70586256 chrX:70586259 nonsynonymous SNV 0.955 0 24 hm5C_associated_SNPs_81183 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:70586229-70586268
64251 chr5 156786054 156786054 1 + G A SKCM 156786051 + 156786031 156786071 41 AGCCACATCTACAGCTCCTACAGGAATTTCGTGGGGCCACC AGCCACATCTACAGCTCCTACAGAAATTTCGTGGGGCCACC < 41bp 0.777621164092139 0.556607104584286 0.5417755 0.24253905 prediction 0.442028119015706 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156786051 chr5:156786054 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_81184 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:156786040-156786060
64251 chr12 123340819 123340819 1 + G A UCEC 123340816 + 123340796 123340836 41 CCCCCAGGGAAGGCCAGTGCCACGGAGGCGCGCTACAACAA CCCCCAGGGAAGGCCAGTGCCACAGAGGCGCGCTACAACAA < 41bp 0.787648909170263 0.566637559831444 0.73259133 0.5486529 prediction 0.442022698677638 Functional Loss - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123340816 chr12:123340819 synonymous SNV . 0 24 hm5C_associated_SNPs_81185 0 0 3 EFTUD2 POSTAR2 ENCODE chr12:123340795-123340831
64251 chr17 42636534 42636534 1 + C T SKCM 42636532 + 42636512 42636552 41 TTCCGCGAGCACTGGGAGCGCTCGTGGGTGAGCCAGCACTG TTCCGCGAGCACTGGGAGCGCTTGTGGGTGAGCCAGCACTG < 41bp 0.785773360472347 0.564763915847457 0.36807287 0.4358833 prediction 0.44201888924978 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636532 chr17:42636534 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_81186 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:42636509-42636551
64251 chr13 95282647 95282647 1 + G T rs193068399 95282644 + 95282624 95282664 41 CTCTTAAAAATGGAAATCATCTGGATGATGAGCATACAGAA CTCTTAAAAATGGAAATCATCTGTATGATGAGCATACAGAA < 41bp 0.721009275765162 0.395897626273934 0.49157912 0.07528457 prediction 0.442018551530324 Functional Loss - GPR180 ENSG00000152749 UTR3 Human protein_coding chr13:95282644 chr13:95282647 . . 0 24 hm5C_associated_SNPs_81187 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:95282647-95282669
64251 chr11 64855506 64855506 1 + C T COAD 64855504 + 64855484 64855524 41 GGCCCTCCTTGCCCTCATGTCTCGCCTAGGCCGGGCCGCAG GGCCCTCCTTGCCCTCATGTCTTGCCTAGGCCGGGCCGCAG < 41bp 0.832749071978515 0.611745952922326 0.1982531 0.13245267 prediction 0.442006238112377 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855504 chr11:64855506 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_81193 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:64855480-64855526
64251 chr8 128751149 128751149 1 + G T STAD 128751147 + 128751127 128751167 41 TCCTGCGCCTCGCAAGACTCCAGCGCCTTCTCTCCGTCCTC TCCTGCGCCTCGCAAGACTCCATCGCCTTCTCTCCGTCCTC < 41bp 0.720987756772433 0.356420218318573 0.14555484 0.02076295 prediction 0.441975513544866 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128751147 chr8:128751149 nonsynonymous SNV 0.403 1 23 hm5C_associated_SNPs_81201 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:128751109-128751186
64251 chr5 149927859 149927859 1 + C T STAD 149927857 + 149927837 149927877 41 ACCGCCGGCTCTGACGCATCCTCGAAGCTGCGTGCCCTCCA ACCGCCGGCTCTGACGCATCCTTGAAGCTGCGTGCCCTCCA < 41bp 0.859623277661732 0.638638449222871 0.54197097 0.077405095 prediction 0.441969656877722 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149927857 chr5:149927859 nonsynonymous SNV 0.112 0 23 hm5C_associated_SNPs_81203 0 0 2 GRWD1 POSTAR2 ENCODE chr5:149927855-149927932
64251 chr2 25044456 25044456 1 + G A READ 25044453 + 25044433 25044473 41 AGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGC AGCGTATCCTTCATGGCCAGCGCAAAGTCGGCCAGGTCAGC < 41bp 0.735015065742936 0.514036218979081 0.26440492 0.17946166 prediction 0.44195769352771 Functional Loss - ADCY3 ENSG00000138031 CDS Human protein_coding chr2:25044453 chr2:25044456 synonymous SNV . 0 24 hm5C_associated_SNPs_81209 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:25044456-25044502
64251 chr2 27830727 27830727 1 + G A STAD 27830724 + 27830704 27830744 41 TCTTGCAGATATCCTTCTTTCCAGAGTCAGGACAGCCAGAG TCTTGCAGATATCCTTCTTTCCAAAGTCAGGACAGCCAGAG < 41bp 0.762632995298581 0.541661156798203 0.4504482 0.2614079 prediction 0.441943677000755 Functional Loss - ZNF512 ENSG00000243943 CDS Human protein_coding chr2:27830724 chr2:27830727 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_81214 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:27830722-27830743
64251 chr19 58371159 58371159 1 + G A SKCM 58371156 + 58371136 58371176 41 GGTTCATGAGAGAGTTCACACTGGAGAAAGGCCATATGCGT GGTTCATGAGAGAGTTCACACTGAAGAAAGGCCATATGCGT < 41bp 0.75846826645242 0.537496547805281 0.16409338 0.032601982 prediction 0.441943437294279 Functional Loss - ZNF587 ENSG00000198466 CDS Human protein_coding chr19:58371156 chr19:58371159 nonsynonymous SNV 0.011 3 24 hm5C_associated_SNPs_81215 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58371129-58371161
64251 chr5 118810137 118810137 1 + G A UCEC 118810134 + 118810114 118810154 41 AGAAGGTTGTGAAGACAGCCCTGGATGCTTTTGGAAGAATA AGAAGGTTGTGAAGACAGCCCTGAATGCTTTTGGAAGAATA < 41bp 0.771608980622428 0.550637493354153 0.2366544 0.118839085 prediction 0.441942974536549 Functional Loss - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118810134 chr5:118810137 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_81216 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr5:118810095-118810152
64251 chr13 45694817 45694817 1 + G A BRCA 45694814 + 45694794 45694834 41 GCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAA GCCGAGCGCGGGGAACTCGACTTAACCGGCGCCAAACAGAA < 41bp 0.739981778457671 0.519015058186182 0.14792061 0.15163419 prediction 0.441933440542979 Functional Loss - GTF2F2 ENSG00000188342 CDS Human protein_coding chr13:45694814 chr13:45694817 synonymous SNV . 0 24 hm5C_associated_SNPs_81219 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:45694806-45694826
64251 chr19 10801367 10801367 1 + A C rs116767163 10801366 + 10801346 10801386 41 CAGGATCTGTGTCGGCCATCCAGGAAGAACTGTACTGGCCA CAGGATCTGTGTCGGCCATCCCGGAAGAACTGTACTGGCCA < 41bp 0.811566133070392 0.590604768655482 0.8608576 0.8583804 prediction 0.441922728829821 Functional Loss - ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10801366 chr19:10801367 . . 0 22 hm5C_associated_SNPs_81220 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10801304-10801402
64251 chr1 173455459 173455459 1 + G A CESC 173455456 + 173455436 173455476 41 CTCTACCCAGCTACCACTGGCAGGAACTTTGATGAGATTCT CTCTACCCAGCTACCACTGGCAGAAACTTTGATGAGATTCT < 41bp 0.766186780464261 0.545234379170337 0.90224326 0.58763105 prediction 0.441904802587848 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173455456 chr1:173455459 synonymous SNV . 0 24 hm5C_associated_SNPs_81224 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:173455400-173455490
64251 chr20 13090813 13090813 1 + G A SKCM 13090810 + 13090790 13090830 41 TGCTGTCATCTATGGCCAGCCTCGAACCCGCAGAGCTTGGA TGCTGTCATCTATGGCCAGCCTCAAACCCGCAGAGCTTGGA < 41bp 0.739851222572394 0.518916597751999 0.31046185 0.21980381 prediction 0.441869249640789 Functional Loss - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13090810 chr20:13090813 nonsynonymous SNV 0.662 5 24 hm5C_associated_SNPs_81235 0 0 4 GRWD1 POSTAR2 ENCODE chr20:13090796-13090863
64251 chr1 151554227 151554227 1 + G A rs114820297 151554224 + 151554204 151554244 41 GCCATTGCTGCTGCCTCTGCCTCGGAGAAGCCCACTGCCCC GCCATTGCTGCTGCCTCTGCCTCAGAGAAGCCCACTGCCCC < 41bp 0.763002647797325 0.54206817678913 0.38278928 0.18056554 prediction 0.44186894201639 Functional Loss - TUFT1 ENSG00000143367 UTR3 Human protein_coding chr1:151554224 chr1:151554227 . . 0 24 hm5C_associated_SNPs_81236 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:151554222-151554245
64251 chr11 64893024 64893024 1 + G A rs34535921 64893021 + 64893001 64893041 41 ATGCACAACATCCCCGTCTACAAGGACATCACGCATGGCAA ATGCACAACATCCCCGTCTACAAAGACATCACGCATGGCAA < 41bp 0.720930939030883 0.484495432437628 0.20855695 0.06666663 prediction 0.441861878061766 Functional Loss - MRPL49 ENSG00000149792 CDS Human protein_coding chr11:64893021 chr11:64893024 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_81238 0 0 2 EWSR1 POSTAR2 SRX029344 chr11:64893003-64893024
64251 chr19 7712299 7712299 1 + G A STAD 7712296 + 7712276 7712316 41 CATAGAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCA CATAGAAGCCCGGGCGGGCCCCCAGCTCATCGTGTATGTCA < 41bp 0.74454775300762 0.523620342743054 0.15192223 0.21674022 prediction 0.441854820529133 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712296 chr19:7712299 nonsynonymous SNV 0.005 3 24 hm5C_associated_SNPs_81241 0 0 2 FMR1 POSTAR2 ENCODE chr19:7712272-7712387
64251 chr19 1295739 1295739 1 + G T LUAD 1295736 + 1295716 1295756 41 CGCCAGCGCGGCTTCAAGCGCTGGGAGTGCAACCGGCCCGC CGCCAGCGCGGCTTCAAGCGCTGTGAGTGCAACCGGCCCGC < 41bp 0.931471752547737 0.710548464989925 0.87714124 0.6212333 prediction 0.441846575115623 Functional Loss - EFNA2 ENSG00000099617 CDS Human protein_coding chr19:1295736 chr19:1295739 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_81243 0 0 1 DDX3X POSTAR2 ENCODE chr19:1295700-1295751
64251 chr17 37881050 37881050 1 + G A rs186232310 37881047 + 37881027 37881067 41 CTGGGCATCTGCCTGACATCCACGGTGCAGCTGGTGACACA CTGGGCATCTGCCTGACATCCACAGTGCAGCTGGTGACACA < 41bp 0.767845648379892 0.546923960543438 0.15690216 0.060278684 prediction 0.441843375672907 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37881047 chr17:37881050 synonymous SNV . 0 24 hm5C_associated_SNPs_81245 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:37881041-37881083
64251 chr17 7480984 7480984 1 + C T LUAD 7480982 + 7480962 7481002 41 CGGAGGAAGGTGGACTGGCTCACCGAGAAGATGCATGCTCG CGGAGGAAGGTGGACTGGCTCATCGAGAAGATGCATGCTCG < 41bp 0.720919967241852 0.431809942782966 0.12582177 0.10096684 prediction 0.441839934483704 Functional Loss - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480982 chr17:7480984 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_81246 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7480980-7481000
64251 chr6 80411369 80411369 1 + C T rs115281126 80411367 + 80411347 80411387 41 AAGAAATACAGGAGACCAGTCTCGAGTGGTGCTGTACTTGT AAGAAATACAGGAGACCAGTCTTGAGTGGTGCTGTACTTGT < 41bp 0.771585886715321 0.550666253416587 0.8836601 0.23757842 prediction 0.441839266597469 Functional Loss - SH3BGRL2 ENSG00000198478 UTR3 Human protein_coding chr6:80411367 chr6:80411369 . . 0 23 hm5C_associated_SNPs_81247 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714641 chr6:80411339-80411370
64251 chr3 195944764 195944764 1 + C T rs34352044 195944761 + 195944741 195944781 41 AAGACCAATTACGGCATCCCCTCCGCCTGCTTCTCTCAGCC AAGACCAATTACGGCATCCCCTCTGCCTGCTTCTCTCAGCC < 41bp 0.72652438658631 0.505606917411829 0.05127445 0.09269047 prediction 0.441834938348962 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195944761 chr3:195944764 synonymous SNV . 0 24 hm5C_associated_SNPs_81248 0 0 2 BUD13 POSTAR2 ENCODE chr3:195944663-195944786
64251 chr9 96436071 96436071 1 + G T UCEC 96436068 + 96436048 96436088 41 CGACTGCTGAAGAGGGCTGCCAAGAACAGTGTCGACCTGGA CGACTGCTGAAGAGGGCTGCCAATAACAGTGTCGACCTGGA < 41bp 0.720916701747394 0.3218896605476 0.37040108 0.19406784 prediction 0.441833403494788 Functional Loss - PHF2 ENSG00000197724;ENSG00000197724 exonic;splicing Human other chr9:96436068 chr9:96436071 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_81249 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:96436050-96436093
64251 chr1 171753612 171753612 1 + C T UCEC 171753610 + 171753590 171753630 41 CAGCCCCACTGTGAAACCATCGCGGGACAATCATTTTGCGA CAGCCCCACTGTGAAACCATCGTGGGACAATCATTTTGCGA < 41bp 0.720915956157917 0.453056273892086 0.8037052 0.8777264 prediction 0.441831912315833 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753610 chr1:171753612 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_81250 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:171753588-171753613
64251 chr1 236341796 236341796 1 + G T LUAD 236341794 + 236341774 236341814 41 CTGTGCTGTGCTGGTAAAGACGGGAAATTGGGAGAGGAAGG CTGTGCTGTGCTGGTAAAGACGTGAAATTGGGAGAGGAAGG < 41bp 0.904072970759643 0.683159812000369 0.82676697 0.37131548 prediction 0.441826317518549 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236341794 chr1:236341796 stopgain 0.383 0 23 hm5C_associated_SNPs_81253 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:236341770-236341797
64251 chr13 111870157 111870157 1 + G A UCEC 111870154 + 111870134 111870174 41 ACCCGTGTGGAAGAGGGAGGCTGGTGGGAGGGCACACTCAA ACCCGTGTGGAAGAGGGAGGCTGATGGGAGGGCACACTCAA < 41bp 0.720911697786325 0.493582336775408 0.86701655 0.7791216 prediction 0.44182339557265 Functional Loss - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111870154 chr13:111870157 stopgain 1.000 1 24 hm5C_associated_SNPs_81255 0 0 4 DDX24 POSTAR2 ENCODE chr13:111870135-111870218
64251 chr6 42643833 42643833 1 + G A OV 42643830 + 42643810 42643850 41 CATTTCCTGCGTTGCAGTGTCAGGATTTTTCAGGGATCAGC CATTTCCTGCGTTGCAGTGTCAGAATTTTTCAGGGATCAGC < 41bp 0.727789465954099 0.506877860749809 0.8827628 0.38779223 prediction 0.441823210408579 Functional Loss - UBR2 ENSG00000024048 CDS Human protein_coding chr6:42643830 chr6:42643833 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_81256 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42643795-42643833
64251 chr3 148712035 148712035 1 + C T rs61733452 148712033 + 148712013 148712053 41 CCACCAGGAGGCTGGTCGTGCTCGCCACCCCTCAGGTCTCA CCACCAGGAGGCTGGTCGTGCTTGCCACCCCTCAGGTCTCA < 41bp 0.720909017430666 0.441202099786677 0.24010396 0.10824072 prediction 0.441818034861332 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148712033 chr3:148712035 synonymous SNV . 0 23 hm5C_associated_SNPs_81258 1 0 1 YBX3 POSTAR2 ENCODE chr3:148711989-148712045
64251 chr3 148712036 148712036 1 + G A UCEC 148712033 + 148712013 148712053 41 CCACCAGGAGGCTGGTCGTGCTCGCCACCCCTCAGGTCTCA CCACCAGGAGGCTGGTCGTGCTCACCACCCCTCAGGTCTCA < 41bp 0.720909017430666 0.482723416026169 0.24010396 0.11217895 prediction 0.441818034861332 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148712033 chr3:148712036 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_81259 0 0 1 YBX3 POSTAR2 ENCODE chr3:148711989-148712045
64251 chrX 150155604 150155604 1 + T C SKCM 150155603 + 150155583 150155623 41 GTATGTAATTCTTCCAAGGTCTGGATTCTTCCTGTTCTGTT GTATGTAATTCTTCCAAGGTCCGGATTCTTCCTGTTCTGTT < 41bp 0.722821567291326 0.501914319694795 0.051356316 0.18431664 prediction 0.441814495193062 Functional Loss - HMGB3 ENSG00000029993 CDS Human protein_coding chrX:150155603 chrX:150155604 synonymous SNV . 0 22 hm5C_associated_SNPs_81260 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:150155598-150155636
64251 chr12 56526515 56526515 1 + G A STAD 56526512 + 56526492 56526532 41 GTGTTCCCCAGGTGATGGTACACGAGGTCCCAGGGCAGGAG GTGTTCCCCAGGTGATGGTACACAAGGTCCCAGGGCAGGAG < 41bp 0.804040894747924 0.583140583535454 0.47164375 0.23758087 prediction 0.441800622424942 Functional Loss - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56526512 chr12:56526515 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_81263 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:56526500-56526520
64251 chr16 72094487 72094487 1 + G T COAD 72094484 + 72094464 72094504 41 TCATGCTGCCTGTGGCTGACCAAGACCAATGCATAAGGCAT TCATGCTGCCTGTGGCTGACCAATACCAATGCATAAGGCAT < 41bp 0.720896460128749 0.315636400164227 0.3509202 0.17258307 prediction 0.441792920257499 Functional Loss - HP ENSG00000257017 CDS Human protein_coding chr16:72094484 chr16:72094487 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_81265 0 0 3 RPS3 POSTAR2 ENCODE chr16:72094460-72094495
64251 chr9 127118932 127118932 1 + G A rs117300833 127118929 + 127118909 127118949 41 GGGAGGTTGATTTGGGAACACTGGATGTACTTAATGTGGAA GGGAGGTTGATTTGGGAACACTGAATGTACTTAATGTGGAA < 41bp 0.742339688607438 0.521443454319744 0.78330266 0.5529679 prediction 0.44179246857539 Functional Loss - LOC100129034 ENSG00000136930 UTR3 Human protein_coding chr9:127118929 chr9:127118932 . . 0 24 hm5C_associated_SNPs_81266 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr9:127118924-127118951
64251 chr17 37872116 37872116 1 + G A UCEC 37872113 + 37872093 37872133 41 ACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGACCAGCT ACCCACCTCTGCTTCGTGCACACAGTGCCCTGGGACCAGCT < 41bp 0.720895237960815 0.474829342234893 0.1931422 0.03837475 prediction 0.44179047592163 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872113 chr17:37872116 synonymous SNV . 0 24 hm5C_associated_SNPs_81267 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:37872110-37872139
64251 chr14 24108433 24108433 1 + C T COAD 24108431 + 24108411 24108451 41 GTCTGGCCCGGGACGGGGCCCACGTGGTCATCAGCAGCCGG GTCTGGCCCGGGACGGGGCCCATGTGGTCATCAGCAGCCGG < 41bp 0.819342150903496 0.598452743724667 0.13498786 0.15518564 prediction 0.441778814357658 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108431 chr14:24108433 synonymous SNV . 0 23 hm5C_associated_SNPs_81269 0 0 4 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr5 139781638 139781638 1 + C T HNSC 139781636 + 139781616 139781656 41 CGATCCGCCCCAGCTGGGGCCTCGGAGCCGCCTCCGCCGGG CGATCCGCCCCAGCTGGGGCCTTGGAGCCGCCTCCGCCGGG < 41bp 0.720887465317445 0.474085855156534 0.8178722 0.5243833 prediction 0.44177493063489 Functional Loss - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139781636 chr5:139781638 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_81272 0 0 9 DHX30 POSTAR2 ENCODE chr5:139781570-139781657
64251 chr7 101201314 101201314 1 + C T rs10264081 101201312 + 101201292 101201332 41 AGTTCCTGAAGCCATGTTCTCTCGACCCTGCCAGCTTCCCC AGTTCCTGAAGCCATGTTCTCTTGACCCTGCCAGCTTCCCC < 41bp 0.772740971940284 0.551854898437988 0.49499717 0.26269406 prediction 0.441772147004594 Functional Loss - COL26A1 ENSG00000160963 UTR3 Human protein_coding chr7:101201312 chr7:101201314 . . 0 23 hm5C_associated_SNPs_81273 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:101201305-101201344
64251 chr14 75190037 75190037 1 + G T SARC 75190034 + 75190014 75190054 41 AGAAATTGGGGCAGAAGTATCGAGTGGCTCTAAGGTAGGAA AGAAATTGGGGCAGAAGTATCGATTGGCTCTAAGGTAGGAA < 41bp 0.720882164043151 0.331254553409443 0.8110185 0.13668916 prediction 0.441764328086301 Functional Loss - FCF1 ENSG00000119616 CDS Human protein_coding chr14:75190034 chr14:75190037 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_81274 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:75189981-75190044
64251 chr5 156760448 156760448 1 + C T SKCM 156760445 + 156760425 156760465 41 TTTGAGAGTGAGGACCTGACCTCCATTGTGGTAAGAGTCTG TTTGAGAGTGAGGACCTGACCTCTATTGTGGTAAGAGTCTG < 41bp 0.774695558760668 0.553813860120107 0.9372208 0.8916496 prediction 0.44176339728112 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156760445 chr5:156760448 synonymous SNV . 0 24 hm5C_associated_SNPs_81275 0 0 1 PPIG POSTAR2 ENCODE chr5:156760388-156760455
64251 chr19 17379746 17379746 1 + G T BRCA 17379743 + 17379723 17379763 41 CCGGGCAGTAGGGGCACAGGCCAGCGTGGGCAGCCGCAGCG CCGGGCAGTAGGGGCACAGGCCATCGTGGGCAGCCGCAGCG < 41bp 0.720875851998634 0.32020868397324 0.5246083 0.22198114 prediction 0.441751703997269 Functional Loss - BABAM1 ENSG00000105393 CDS Human protein_coding chr19:17379743 chr19:17379746 nonsynonymous SNV 0.462 2 24 hm5C_associated_SNPs_81279 0 0 8 GPKOW POSTAR2 ENCODE chr19:17379664-17379750
64251 chr16 3339503 3339503 1 + G A SKCM 3339500 + 3339480 3339520 41 GAGGGGAGGTGCCCTGGAGTCCTGAGCTGGGAAGACCTCAT GAGGGGAGGTGCCCTGGAGTCCTAAGCTGGGAAGACCTCAT < 41bp 0.765978419420269 0.545107794642819 0.29257512 0.18992257 prediction 0.441741249554899 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339500 chr16:3339503 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_81281 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3339457-3339503
64251 chr17 6012996 6012996 1 + C T UCEC 6012993 + 6012973 6013013 41 ACCCTACCCCCCGGTTCAACCTGCGGGATGCCATGGACAGC ACCCTACCCCCCGGTTCAACCTGTGGGATGCCATGGACAGC < 41bp 0.747430722557924 0.526560910000253 0.32830858 0.18502036 prediction 0.441739625115342 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6012993 chr17:6012996 nonsynonymous SNV 0.855 1 24 hm5C_associated_SNPs_81282 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:6012995-6013015
64251 chr3 53220294 53220294 1 + G A STAD 53220291 + 53220271 53220311 41 AGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCA AGTGCACCATGGTTGAGAAGCGGATGCTGACACTTGCCGCA < 41bp 0.811764822378985 0.590899046898776 0.5854231 0.359713 prediction 0.441731550960416 Functional Loss - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53220291 chr3:53220294 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81285 0 0 1 PPIG POSTAR2 ENCODE chr3:53220244-53220305
64251 chr19 17845108 17845108 1 + G A STAD 17845105 + 17845085 17845125 41 ACCCTGATCCCCACTTTCGACTCGGTGGCCATGCATACGTG ACCCTGATCCCCACTTTCGACTCAGTGGCCATGCATACGTG < 41bp 0.787116812771057 0.566251221375357 0.4014998 0.15100709 prediction 0.4417311827914 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17845105 chr19:17845108 synonymous SNV . 0 24 hm5C_associated_SNPs_81286 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr19:17845073-17845114
64251 chr9 131671292 131671292 1 + C T GBM 131671289 + 131671269 131671309 41 CCATCTTCAGCCTCCACAACCTGCAGGAGATTGACCTCAAG CCATCTTCAGCCTCCACAACCTGTAGGAGATTGACCTCAAG < 41bp 0.720864108651662 0.493090597919616 0.08316547 0.034861565 prediction 0.441728217303324 Functional Loss - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671289 chr9:131671292 stopgain 1.000 1 24 hm5C_associated_SNPs_81289 0 0 2 YBX3 POSTAR2 ENCODE chr9:131671242-131671320
64251 chr13 115090600 115090600 1 + C T SKCM 115090597 + 115090577 115090617 41 CAAACCCGGCCCACCACTATCCCCAGAGATCCGTAGTCCAG CAAACCCGGCCCACCACTATCCCTAGAGATCCGTAGTCCAG < 41bp 0.720857567424082 0.49581224779162 0.30322033 0.091685295 prediction 0.441715134848164 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090597 chr13:115090600 nonsynonymous SNV 0.873 2 24 hm5C_associated_SNPs_81292 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr13:115090576-115090602
64251 chr20 376920 376920 1 + G A rs61744723 376917 + 376897 376937 41 GATTCCCTGTGGGACAAGCACGCGTGCCCAGCCTACGTGGG GATTCCCTGTGGGACAAGCACGCATGCCCAGCCTACGTGGG < 41bp 0.720850785955314 0.472650899185288 0.3479672 0.08454591 prediction 0.441701571910628 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:376917 chr20:376920 synonymous SNV . 0 24 hm5C_associated_SNPs_81296 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:376840-376920
64251 chr9 115337189 115337189 1 + T C STAD 115337188 + 115337168 115337208 41 TCTGCATCCCCCTCTGTGATCTCCAGACCAATTGTCCAGAA TCTGCATCCCCCTCTGTGATCCCCAGACCAATTGTCCAGAA < 41bp 0.844439711046215 0.623591931013076 0.9176045 0.1613659 prediction 0.441695560066278 Functional Loss - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115337188 chr9:115337189 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_81298 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:115337160-115337200
64251 chr19 18701800 18701800 1 + G A rs569174444 18701797 + 18701777 18701817 41 TCGATTTGCACCAGGGTTGGCACGGTCAGGACGCTGCCAGC TCGATTTGCACCAGGGTTGGCACAGTCAGGACGCTGCCAGC < 41bp 0.750668339550765 0.529821130637279 0.87808084 0.85594064 prediction 0.441694417826971 Functional Loss - C19orf60 ENSG00000006015 intronic Human protein_coding chr19:18701797 chr19:18701800 . . 0 24 hm5C_associated_SNPs_81299 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:18701779-18701809
64251 chr12 50484146 50484146 1 + C T rs61751610 50484144 + 50484124 50484164 41 CACATAAGCTCCAGGACCCTCACGAGCGGGAGTTTGTCATC CACATAAGCTCCAGGACCCTCATGAGCGGGAGTTTGTCATC < 41bp 0.867083751807626 0.646239834171634 0.09512922 0.023756683 prediction 0.441687835271985 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50484144 chr12:50484146 synonymous SNV . 0 23 hm5C_associated_SNPs_81301 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:50484115-50484181
64251 chr19 12902735 12902735 1 + C T BLCA 12902733 + 12902713 12902753 41 TGGCCGACCCCTACCGGAGTCTCAAAGCGCCTGGGGCTCGC TGGCCGACCCCTACCGGAGTCTTAAAGCGCCTGGGGCTCGC < 41bp 0.811591420802538 0.590747942300105 0.87810737 0.14100978 prediction 0.441686957004865 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12902733 chr19:12902735 synonymous SNV . 0 23 hm5C_associated_SNPs_81304 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:12902641-12902744
64251 chr1 29442270 29442270 1 + G A UCEC 29442267 + 29442247 29442287 41 CACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGA CACCCAGACATGTCAGTGACCAAAGTGGTCGTCCACCAGGA < 41bp 0.720839832494278 0.492629560203962 0.9041036 0.5243813 prediction 0.441679664988557 Functional Loss - EPB41 ENSG00000159023 CDS Human protein_coding chr1:29442267 chr1:29442270 synonymous SNV . 0 24 hm5C_associated_SNPs_81307 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29442228-29442311
64251 chr7 108212299 108212299 1 + G T UCS 108212296 + 108212276 108212316 41 TCGGCATCAGAGCGCCAAATCAAGAAGGCCTTTCACAAGTT TCGGCATCAGAGCGCCAAATCAATAAGGCCTTTCACAAGTT < 41bp 0.926393218980643 0.705554160255236 0.6637164 0.27288485 prediction 0.441678117450814 Functional Loss - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108212296 chr7:108212299 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81309 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:108212275-108212306
64251 chr10 5790628 5790628 1 + G A UCEC 5790625 + 5790605 5790645 41 ACAAAGGAGCTATTGAATGTCGGGGTTTCCTCCCTTTGTGC ACAAAGGAGCTATTGAATGTCGGAGTTTCCTCCCTTTGTGC < 41bp 0.78706229357272 0.566223305366227 0.9429395 0.9222758 prediction 0.441677976412986 Functional Loss - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5790625 chr10:5790628 synonymous SNV . 0 24 hm5C_associated_SNPs_81310 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:5790578-5790635
64251 chr7 56125714 56125714 1 + G A CESC 56125711 + 56125691 56125731 41 TCAGAGGGCTTGTTTTGGACCACGGAGCACGGCATCCTGAT TCAGAGGGCTTGTTTTGGACCACAGAGCACGGCATCCTGAT < 41bp 0.780100695275479 0.559265299250703 0.08076286 0.060210377 prediction 0.441670792049553 Functional Loss - CCT6A ENSG00000146731 CDS Human protein_coding chr7:56125711 chr7:56125714 nonsynonymous SNV 0.679 4 24 hm5C_associated_SNPs_81314 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:56125680-56125740
64251 chr6 3264466 3264466 1 + G A rs367666695 3264463 + 3264443 3264483 41 GGCTCGGAGGGAAGACTGGCCTGGCCTGTGAGTGTGGCGTA GGCTCGGAGGGAAGACTGGCCTGACCTGTGAGTGTGGCGTA < 41bp 0.797265614346423 0.576431815805168 0.26146472 0.121599525 prediction 0.44166759708251 Functional Loss - PSMG4 ENSG00000180822 CDS Human protein_coding chr6:3264463 chr6:3264466 stopgain 0.016 0 24 hm5C_associated_SNPs_81316 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:3264413-3264487
64251 chr14 93290946 93290946 1 + G T UCEC 93290944 + 93290924 93290964 41 ACAAAGAACACATTGCAAAGCAGAATTAAAGATCGAGACGA ACAAAGAACACATTGCAAAGCATAATTAAAGATCGAGACGA < 41bp 0.720831398398073 0.391665080976802 0.27439463 0.04549852 prediction 0.441662796796146 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93290944 chr14:93290946 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_81317 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93290899-93290984
64251 chr11 209885 209885 1 + C T UCEC 209882 + 209862 209902 41 GGAGCTGACGCTGGGGGTGACTCCTGAAGGGAACCCCCCAC GGAGCTGACGCTGGGGGTGACTCTTGAAGGGAACCCCCCAC < 41bp 0.725479498692211 0.504648522246835 0.062259853 0.044974983 prediction 0.441661952890751 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209882 chr11:209885 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_81318 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209860-209887
64251 chr17 42254167 42254167 1 - G A SKCM 42254169 - 42254149 42254189 41 GCCGCCACGTGCAGGGGCGTCTCCTGGCTCTCGCCTGCTGC GCCGCCACGTGCAGGGGCGTCTTCTGGCTCTCGCCTGCTGC < 41bp 0.720827251771006 0.473687824430821 0.37816805 0.29336977 prediction 0.441654503542012 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254169 chr17:42254167 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_81320 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr17:42254161-42254210
64251 chrX 23685870 23685870 1 + G T LUSC 23685868 + 23685848 23685888 41 ACGCGGGTGGACAAGTGTACCCGGGAGAGGCATCCCGGGTA ACGCGGGTGGACAAGTGTACCCTGGAGAGGCATCCCGGGTA < 41bp 0.908247693166104 0.687420496881673 0.9111073 0.55497855 prediction 0.441654392568861 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685868 chrX:23685870 synonymous SNV . 0 23 hm5C_associated_SNPs_81321 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:23685858-23685896
64251 chr2 173334104 173334104 1 + G A SKCM 173334101 + 173334081 173334121 41 GGAGCCCCGGGTACTTATAACTGGAAAGGTATGACCTTTGT GGAGCCCCGGGTACTTATAACTGAAAAGGTATGACCTTTGT < 41bp 0.734657271447516 0.513834597031682 0.21613556 0.13465148 prediction 0.441645348831669 Functional Loss - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173334101 chr2:173334104 stopgain 0.999 1 24 hm5C_associated_SNPs_81324 0 0 1 SND1 POSTAR2 ENCODE chr2:173334076-173334107
64251 chr11 119155954 119155954 1 + G C BRCA 119155953 + 119155933 119155973 41 TGCCAGTACCTCCCACACTTCGAGATCTTCCACCACCACCG TGCCAGTACCTCCCACACTTCCAGATCTTCCACCACCACCG < 41bp 0.72082225452063 0.393982152022166 0.20624813 0.11741474 prediction 0.44164450904126 Functional Loss - CBL ENSG00000110395 CDS Human protein_coding chr11:119155953 chr11:119155954 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_81325 0 0 3 DDX24 POSTAR2 ENCODE chr11:119155898-119155973
64251 chr14 61346478 61346478 1 + T C STAD 61346477 + 61346457 61346497 41 TTCACAAGCTTGAAGAAGCTCTGTATGAATACCAGCCACTG TTCACAAGCTTGAAGAAGCTCCGTATGAATACCAGCCACTG < 41bp 0.720819860324935 0.463529426493295 0.09537321 0.14421064 prediction 0.44163972064987 Functional Loss - MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346477 chr14:61346478 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_81327 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:61346457-61346482
64251 chr9 4663111 4663111 1 + T C UCEC 4663110 + 4663090 4663130 41 GTGGTTCTGTGGGCCTTCGTCTTGGGCCTATCCAGGGTCAT GTGGTTCTGTGGGCCTTCGTCCTGGGCCTATCCAGGGTCAT < 41bp 0.743340872276066 0.522530259443858 0.42215875 0.6580984 prediction 0.441621225664415 Functional Loss - PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4663110 chr9:4663111 synonymous SNV . 0 22 hm5C_associated_SNPs_81333 0 0 2 SND1 POSTAR2 ENCODE chr9:4663074-4663119
64251 chr4 1803650 1803650 1 + G A UCEC 1803647 + 1803627 1803667 41 AGCGACGTGGAGTTCCACTGCAAGGTGTACAGTGACGCACA AGCGACGTGGAGTTCCACTGCAAAGTGTACAGTGACGCACA < 41bp 0.794695980397747 0.573888298757636 0.87902623 0.35263824 prediction 0.441615363280222 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1803647 chr4:1803650 synonymous SNV . 0 24 hm5C_associated_SNPs_81336 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:1803631-1803669
64251 chr19 50173592 50173592 1 + C T UCEC 50173590 + 50173570 50173610 41 CTCGCCCAAGCCGAGCATGCCCCGGGCCCCCGCCTCCTTCC CTCGCCCAAGCCGAGCATGCCCTGGGCCCCCGCCTCCTTCC < 41bp 0.720807029530501 0.478792724223599 0.8934273 0.4459742 prediction 0.441614059061002 Functional Loss - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50173590 chr19:50173592 synonymous SNV . 0 23 hm5C_associated_SNPs_81337 0 0 6 BUD13 POSTAR2 ENCODE chr19:50173576-50173634
64251 chr1 3389659 3389659 1 + A T ESCA 3389655 + 3389635 3389675 41 CCTTCAGGTTCTTCGAGGACCTGGAGCAGCGGCACAAGGCC CCTTCAGGTTCTTCGAGGACCTGGTGCAGCGGCACAAGGCC < 41bp 0.889810615214124 0.669007699495808 0.3416748 0.2861284 prediction 0.441605831436632 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3389655 chr1:3389659 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_81339 0 0 2 GRWD1 POSTAR2 ENCODE chr1:3389645-3389685
64251 chr22 38273774 38273774 1 + C T PCPG 38273771 + 38273751 38273791 41 ATGAGAGCATTCACCTCCAGCTGCGGGAGAAATATGGGGAC ATGAGAGCATTCACCTCCAGCTGTGGGAGAAATATGGGGAC < 41bp 0.742428858605381 0.521639746656292 0.42710692 0.2947123 prediction 0.44157822389818 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38273771 chr22:38273774 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81344 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:38273741-38273780
64251 chr20 61467616 61467616 1 + G C COAD 61467612 + 61467592 61467632 41 CAGCGGTGTTCAGGGTGTCCCCGGGCCCCCCGGTCCTCTGG CAGCGGTGTTCAGGGTGTCCCCGGCCCCCCCGGTCCTCTGG < 41bp 0.720786197788954 0.429519973495984 0.9295006 0.9002305 prediction 0.441572395577908 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467612 chr20:61467616 synonymous SNV . 0 25 hm5C_associated_SNPs_81346 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:61467606-61467638
64251 chr15 59397365 59397365 1 + G A rs144017866 59397362 + 59397342 59397382 41 GTCGAAGATCCCCAGCGCTGCGGGCTCGGAGAGCAGTCCTA GTCGAAGATCCCCAGCGCTGCGGACTCGGAGAGCAGTCCTA < 41bp 0.737421165716541 0.516635561811251 0.85000724 0.6151593 prediction 0.44157120781058 Functional Loss - CCNB2 ENSG00000157456 UTR5 Human protein_coding chr15:59397362 chr15:59397365 . . 0 24 hm5C_associated_SNPs_81348 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:59397345-59397377
64251 chr15 85188819 85188819 1 + G A BLCA 85188816 + 85188796 85188836 41 GCTCACAGGATGGCAGAGATCCCGGGGGTCAAGAAGACAAA GCTCACAGGATGGCAGAGATCCCAGGGGTCAAGAAGACAAA < 41bp 0.772374971653035 0.551589691362479 0.90360963 0.83579254 prediction 0.441570560581113 Functional Loss - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188816 chr15:85188819 nonsynonymous SNV 0.942 4 24 hm5C_associated_SNPs_81349 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:85188773-85188825
64251 chr3 10261471 10261471 1 + G A UCEC 10261468 + 10261448 10261488 41 GAGATCATCCACAGCAACGTCAAGAGGTGAGAGAGGTGGGC GAGATCATCCACAGCAACGTCAAAAGGTGAGAGAGGTGGGC < 41bp 0.789469976227664 0.568689907198817 0.3843395 0.32770956 prediction 0.441560138057693 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10261468 chr3:10261471 synonymous SNV . 0 24 hm5C_associated_SNPs_81352 0 0 1 PRPF8 POSTAR2 ENCODE chr3:10261471-10261490
64251 chr12 113596864 113596864 1 - C T UCEC 113596867 - 113596847 113596887 41 CCCCTGCAGGCCGAGTCCGCCCGGAACTCAAGACCAAGCAG CCCCTGCAGGCCGAGTCCGCCCGAAACTCAAGACCAAGCAG < 41bp 0.771808636662502 0.551033835393949 0.4750904 0.12364665 prediction 0.441549602537106 Functional Loss - DDX54 ENSG00000123064 CDS Human protein_coding chr12:113596867 chr12:113596864 nonsynonymous SNV 0.539 4 24 hm5C_associated_SNPs_81353 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585668 chr12:113596837-113596868
64251 chr13 53237241 53237241 1 + T C COAD 53237240 + 53237220 53237260 41 TGTTTTAATAGGCTCAGAATCTGAGGTGGTAAGTCCAAAGT TGTTTTAATAGGCTCAGAATCCGAGGTGGTAAGTCCAAAGT < 41bp 0.720765951977735 0.498187812704747 0.5311715 0.8609891 prediction 0.44153190395547 Functional Loss - SUGT1 ENSG00000165416 CDS Human protein_coding chr13:53237240 chr13:53237241 synonymous SNV . 0 22 hm5C_associated_SNPs_81359 0 0 1 SF3B4 POSTAR2 ENCODE chr13:53237222-53237287
64251 chr2 163213333 163213333 1 + G T LUSC 163213330 + 163213310 163213350 41 CTATGGGCAGCTCTTAATGCCTGGAAGGAAAACTTCATGAC CTATGGGCAGCTCTTAATGCCTGTAAGGAAAACTTCATGAC < 41bp 0.91876884935984 0.698005756582752 0.2666828 0.1409607 prediction 0.441526185554176 Functional Loss - GCA ENSG00000115271 CDS Human protein_coding chr2:163213330 chr2:163213333 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81363 0 0 2 GRWD1 POSTAR2 ENCODE chr2:163213267-163213420
64251 chr5 145435769 145435769 1 + G A SKCM 145435766 + 145435746 145435786 41 CTTCGGAAAGGGCGGAGCAGCATGAGAAAGAGTAAGTGGTG CTTCGGAAAGGGCGGAGCAGCATAAGAAAGAGTAAGTGGTG < 41bp 0.720763076045074 0.487962838882034 0.3144139 0.26341695 prediction 0.441526152090148 Functional Loss - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145435766 chr5:145435769 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_81364 0 0 3 GRWD1 POSTAR2 ENCODE chr5:145435665-145435778
64251 chr16 68349919 68349919 1 + G C LUAD 68349915 + 68349895 68349935 41 TGCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGTGGCT TGCAGTCGGGCCAATCCGACCACGCGGTCTGTGGAGTGGCT < 41bp 0.720760721925288 0.428839267192257 0.8788456 0.42095977 prediction 0.441521443850576 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68349915 chr16:68349919 nonsynonymous SNV 0.127 3 25 hm5C_associated_SNPs_81368 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:68349915-68349949
64251 chr19 33870337 33870337 1 + G A UCEC 33870334 + 33870314 33870354 41 CCCATGGATCGAAACAGTGACGAGTATCGGCAACGCCGAGA CCCATGGATCGAAACAGTGACGAATATCGGCAACGCCGAGA < 41bp 0.763466609326743 0.542719110601662 0.22552803 0.15306169 prediction 0.441494997450161 Functional Loss - CEBPG ENSG00000153879 CDS Human protein_coding chr19:33870334 chr19:33870337 synonymous SNV . 0 24 hm5C_associated_SNPs_81376 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33870043-33870391
64251 chr8 33357999 33357999 1 - G A UCEC 33358002 - 33357982 33358022 41 CTTCCTGATTCCAGAGTTTCCTGCAGACTTGTGGTCTTACT CTTCCTGATTCCAGAGTTTCCTGTAGACTTGTGGTCTTACT < 41bp 0.757140969583653 0.536396918597126 0.20082906 0.12962055 prediction 0.441488101973054 Functional Loss - TTI2 ENSG00000129696 CDS Human protein_coding chr8:33358002 chr8:33357999 synonymous SNV . 0 24 hm5C_associated_SNPs_81380 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:33357980-33358004
64251 chrX 152034484 152034484 1 + G T LUAD 152034482 + 152034462 152034502 41 CTCATCGAGGCAGCCAGGAACGGCAAGATGAAGTTCGTGAT CTCATCGAGGCAGCCAGGAACGTCAAGATGAAGTTCGTGAT < 41bp 0.907742407219559 0.686998666711345 0.74373823 0.24069008 prediction 0.441487481016428 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152034482 chrX:152034484 nonsynonymous SNV 0.880 5 23 hm5C_associated_SNPs_81381 0 0 3 GRWD1 POSTAR2 ENCODE chrX:152034430-152034486
64251 chr19 36038271 36038271 1 + G T LUAD 36038269 + 36038249 36038289 41 TGGGCAGTTGGGCAGCTCTACTGGCCCGAGCAGTGGTAACG TGGGCAGTTGGGCAGCTCTACTTGCCCGAGCAGTGGTAACG < 41bp 0.72074020722969 0.376789522055347 0.5733873 0.25796103 prediction 0.441480414459379 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36038269 chr19:36038271 synonymous SNV . 0 23 hm5C_associated_SNPs_81384 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36038250-36038295
64251 chr4 41259024 41259024 1 + G C CESC 41259023 + 41259003 41259043 41 AAGCCGATGGAGATCAACCCCGAGGTGAGCGCCAGGTGCAC AAGCCGATGGAGATCAACCCCCAGGTGAGCGCCAGGTGCAC < 41bp 0.870470952465979 0.64973155054643 0.8891537 0.755417 prediction 0.441478803839098 Functional Loss - UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41259023 chr4:41259024 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_81385 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:41258960-41259024
64251 chr3 9965687 9965687 1 + C T SKCM 9965685 + 9965665 9965705 41 GGTCCAGGGCCCCCCAAAACCCCGGTGGCACAAAAACCTGG GGTCCAGGGCCCCCCAAAACCCTGGTGGCACAAAAACCTGG < 41bp 0.79003381982455 0.569297346403363 0.8011339 0.68212736 prediction 0.441472946842375 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9965685 chr3:9965687 nonsynonymous SNV 0.285 0 23 hm5C_associated_SNPs_81386 0 0 1 DDX55 POSTAR2 ENCODE chr3:9965640-9965755
64251 chr19 36236879 36236879 1 + G A BLCA 36236876 + 36236856 36236896 41 GAGGAGAAATTGAACCTGTGCCGGAAGTACTACCTGGGTAA GAGGAGAAATTGAACCTGTGCCGAAAGTACTACCTGGGTAA < 41bp 0.788437867179127 0.567706526343971 0.8759788 0.32372886 prediction 0.441462681670311 Functional Loss - PSENEN ENSG00000188223;ENSG00000205155 CDS Human other chr19:36236876 chr19:36236879 synonymous SNV . 0 24 hm5C_associated_SNPs_81389 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36236810-36236883
64251 chrX 54471517 54471517 1 + G A rs187428092 54471514 + 54471494 54471534 41 CAACAGCTCTGTACCCCTGCCCAGAACTTGGAACCTCCCAG CAACAGCTCTGTACCCCTGCCCAAAACTTGGAACCTCCCAG < 41bp 0.752434950074984 0.531707809520936 0.07991272 0.054311097 prediction 0.441454281108097 Functional Loss - TSR2 ENSG00000158526 UTR3 Human protein_coding chrX:54471514 chrX:54471517 . . 0 24 hm5C_associated_SNPs_81394 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54471255-54471584
64251 chr10 99512859 99512859 1 + T C COAD 99512858 + 99512838 99512878 41 CCCTGCAGGACAACGGGTTCCTGAGCAAGAATGAGGTGCTG CCCTGCAGGACAACGGGTTCCCGAGCAAGAATGAGGTGCTG < 41bp 0.763802615152339 0.54308672091503 0.3466127 0.39834338 prediction 0.441431788474619 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99512858 chr10:99512859 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_81401 0 0 11 EIF3G POSTAR2 GSE65004,GSM1585675 chr10:99512828-99512866
64251 chr9 130550917 130550917 1 + G A rs143718708 130550914 + 130550894 130550934 41 AGCCCCATCATGCAGGGCAACACGGAGCAGCACCAACTCGC AGCCCCATCATGCAGGGCAACACAGAGCAGCACCAACTCGC < 41bp 0.783963583195172 0.563247970702489 0.5365401 0.2006475 prediction 0.441431224985366 Functional Loss - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550914 chr9:130550917 synonymous SNV . 0 24 hm5C_associated_SNPs_81402 0 0 1 RPS3 POSTAR2 ENCODE chr9:130550845-130550941
64251 chr12 72148958 72148958 1 + G T COAD 72148955 + 72148935 72148975 41 GCGGGGCGGCGGCGGCGGGCCGAGCCTACTCGTTCAAGGTG GCGGGGCGGCGGCGGCGGGCCGATCCTACTCGTTCAAGGTG < 41bp 0.920039783855854 0.699324397853062 0.7374366 0.29211783 prediction 0.441430772005584 Functional Loss - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72148955 chr12:72148958 nonsynonymous SNV 0.977 0 24 hm5C_associated_SNPs_81403 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:72148935-72148966
64251 chr19 50983882 50983882 1 + C T OV 50983880 + 50983860 50983900 41 TGTCGGACCAGCTGACCCTGCACGTGGATGTGGCCGGCAAC TGTCGGACCAGCTGACCCTGCATGTGGATGTGGCCGGCAAC < 41bp 0.720705174579223 0.465534729582706 0.3766973 0.37700218 prediction 0.441410349158445 Functional Loss - EMC10 ENSG00000161671 CDS Human protein_coding chr19:50983880 chr19:50983882 synonymous SNV . 0 23 hm5C_associated_SNPs_81407 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50983865-50983892
64251 chr19 8468638 8468638 1 + G A rs182133113 8468635 + 8468615 8468655 41 CCCGGGGAAAAGCTAGAAGCCCCGGTTTGCTGCACCCATGA CCCGGGGAAAAGCTAGAAGCCCCAGTTTGCTGCACCCATGA < 41bp 0.775060325899081 0.554362337617463 0.24298623 0.27686876 prediction 0.441395976563235 Functional Loss - RAB11B ENSG00000185236 UTR3 Human protein_coding chr19:8468635 chr19:8468638 . . 0 24 hm5C_associated_SNPs_81412 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:8468584-8468651
64251 chr20 18523027 18523027 1 + G A STAD 18523024 + 18523004 18523044 41 CCAGCACCCAGAGACGCATCCGCGTGACCACCATCGCCCGA CCAGCACCCAGAGACGCATCCGCATGACCACCATCGCCCGA < 41bp 0.790631334627347 0.569934051422178 0.5338255 0.10021132 prediction 0.441394566410338 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18523024 chr20:18523027 nonsynonymous SNV 0.990 5 24 hm5C_associated_SNPs_81414 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr20:18523019-18523039
64251 chr20 25187901 25187901 1 + C T SKCM 25187899 + 25187879 25187919 41 CACCAGGGCAGCCCCGGGGGCCCGGTGGGGTCAGCAGGCCC CACCAGGGCAGCCCCGGGGGCCTGGTGGGGTCAGCAGGCCC < 41bp 0.737789338402806 0.517093814284585 0.71872747 0.89433664 prediction 0.441391048236443 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187899 chr20:25187901 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_81415 0 0 4 DDX3X POSTAR2 ENCODE chr20:25187847-25187915
64251 chr16 84778335 84778335 1 + T C UCEC 84778334 + 84778314 84778354 41 GCTACAGTATTTCAAGCACACTGAACCCTCAGGCCCCTGAA GCTACAGTATTTCAAGCACACCGAACCCTCAGGCCCCTGAA < 41bp 0.720693309341847 0.47823355188259 0.094157964 0.00959155 prediction 0.441386618683695 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778334 chr16:84778335 stoploss 1.000 3 22 hm5C_associated_SNPs_81419 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:84778247-84778365
64251 chr7 39611989 39611989 1 + A T UCS 39611985 + 39611965 39612005 41 AAGAGTATGTGCTCAAACATCTGAAATCAATCACTCCACCG AAGAGTATGTGCTCAAACATCTGATATCAATCACTCCACCG < 41bp 0.892825237468817 0.672139300913581 0.0231466 0.013137519 prediction 0.441371873110473 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39611985 chr7:39611989 nonsynonymous SNV 0.959 1 25 hm5C_associated_SNPs_81422 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:39611915-39612032
64251 chr17 4789853 4789853 1 + C T UCEC 4789851 + 4789831 4789871 41 CCCTTCATCCGGGACCAGCCCACGGAGCGGCAGGTCCGCAT CCCTTCATCCGGGACCAGCCCATGGAGCGGCAGGTCCGCAT < 41bp 0.78915576024566 0.568470441468917 0.41581285 0.2516489 prediction 0.441370637553485 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4789851 chr17:4789853 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_81423 0 0 4 UCHL5 POSTAR2 ENCODE chr17:4789833-4789885
64251 chr1 148951418 148951418 1 + G A UCEC 148951415 + 148951395 148951435 41 ACCCGCAGAGATGAATGTGCCTGGATACCTGAGTCACCAGG ACCCGCAGAGATGAATGTGCCTGAATACCTGAGTCACCAGG < 41bp 0.728988371552261 0.508309394622367 0.56049746 0.16957629 prediction 0.441357953859788 Functional Loss - LOC645166 ENSG00000232527 ncRNA_exonic Human lincRNA chr1:148951415 chr1:148951418 . . 0 24 hm5C_associated_SNPs_81425 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:148951387-148951426
64251 chr9 117087125 117087125 1 + C T OV 117087122 + 117087102 117087142 41 ATCCTCAGGGACACCAAGACCTACATGCTTGCTTTTGACGT ATCCTCAGGGACACCAAGACCTATATGCTTGCTTTTGACGT < 41bp 0.720671336742291 0.499898193960935 0.8924295 0.3446964 prediction 0.441342673484583 Functional Loss - ORM1 ENSG00000229314 CDS Human protein_coding chr9:117087122 chr9:117087125 synonymous SNV . 0 24 hm5C_associated_SNPs_81430 0 0 4 RPS3 POSTAR2 ENCODE chr9:117087069-117087133
64251 chr19 39871358 39871358 1 + C T CESC 39871356 + 39871336 39871376 41 CGGATGGGCCTCCTGAGCCCCTCGGGCATTGGGGGTGTCTC CGGATGGGCCTCCTGAGCCCCTTGGGCATTGGGGGTGTCTC < 41bp 0.825496512040327 0.604836224433313 0.2949893 0.077973485 prediction 0.441320575214029 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39871356 chr19:39871358 nonsynonymous SNV 0.785 1 23 hm5C_associated_SNPs_81438 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39871339-39871362
64251 chr19 35761708 35761708 1 + C T LUAD 35761705 + 35761685 35761725 41 CCCCCGGACACACCCTTACTCTCCGTATGTGCAGGGGACAC CCCCCGGACACACCCTTACTCTCTGTATGTGCAGGGGACAC < 41bp 0.731513860588904 0.510856585653414 0.23523632 0.04381022 prediction 0.44131454987098 Functional Loss - USF2 ENSG00000105698 CDS Human protein_coding chr19:35761705 chr19:35761708 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_81443 0 0 2 PRPF8 POSTAR2 ENCODE chr19:35761665-35761750
64251 chr18 77895908 77895908 1 + G T LUAD 77895906 + 77895886 77895926 41 GAGGGCACCCCCGGGAGCACCGGCAAGCGAGTGTCCACCTG GAGGGCACCCCCGGGAGCACCGTCAAGCGAGTGTCCACCTG < 41bp 0.904084658228096 0.683439900275756 0.8865434 0.82294786 prediction 0.441289515904681 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895906 chr18:77895908 nonsynonymous SNV 0.018 0 23 hm5C_associated_SNPs_81453 0 0 2 EIF3H POSTAR2 ENCODE chr18:77895856-77895918
64251 chr5 126860282 126860282 1 + G A DLBC 126860279 + 126860259 126860299 41 CCATGGAGTCCTTCCCACCACTCGCATACTCTACTCCTCAG CCATGGAGTCCTTCCCACCACTCACATACTCTACTCCTCAG < 41bp 0.720634234916845 0.484823489276638 0.008094728 0.0027551055 prediction 0.44126846983369 Functional Loss - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126860279 chr5:126860282 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_81459 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:126860280-126860320
64251 chr12 132404023 132404023 1 + G A STAD 132404020 + 132404000 132404040 41 CTGCCTGCCGCCCCCAGCTTCGCGGAACAGCTGGTGCTGTA CTGCCTGCCGCCCCCAGCTTCGCAGAACAGCTGGTGCTGTA < 41bp 0.784758263642693 0.564126469403603 0.8368999 0.7875869 prediction 0.44126358847818 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132404020 chr12:132404023 synonymous SNV . 0 24 hm5C_associated_SNPs_81462 0 0 13 BUD13 POSTAR2 ENCODE chr12:132403978-132404055
64251 chr1 154247925 154247925 1 + A T SKCM 154247921 + 154247901 154247941 41 TGAGGGCCGGACAGAGACTACAGTAACCCGACACGAAGCAG TGAGGGCCGGACAGAGACTACAGTTACCCGACACGAAGCAG < 41bp 0.720626630204027 0.393190705384443 0.24487731 0.2656079 prediction 0.441253260408054 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154247921 chr1:154247925 synonymous SNV . 0 25 hm5C_associated_SNPs_81463 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:154247873-154247930
64251 chr16 67173918 67173918 1 + G A HNSC 67173915 + 67173895 67173935 41 CCTGGCCTATTAGCAGATGCCAAGATGCGGGTATTTGAACG CCTGGCCTATTAGCAGATGCCAAAATGCGGGTATTTGAACG < 41bp 0.76068410792832 0.540058498117833 0.31888554 0.35441738 prediction 0.441251219620973 Functional Loss - C16orf70 ENSG00000125149 CDS Human protein_coding chr16:67173915 chr16:67173918 synonymous SNV . 0 24 hm5C_associated_SNPs_81465 0 0 6 BUD13 POSTAR2 ENCODE chr16:67173875-67173925
64251 chr19 17835910 17835910 1 + G T LUSC 17835907 + 17835887 17835927 41 TCACAAGCTACTGGTGTTGGCTGGGCCCTGCCTGGAGGAGA TCACAAGCTACTGGTGTTGGCTGTGCCCTGCCTGGAGGAGA < 41bp 0.720624195067073 0.315970794420793 0.7882474 0.2708797 prediction 0.441248390134147 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17835907 chr19:17835910 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_81466 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:17835896-17835916
64251 chr16 57171150 57171150 1 + G A UCEC 57171147 + 57171127 57171167 41 ATTTCTCCCCCATCGTCAACCACGTGGCCCGGTTTGCGGCC ATTTCTCCCCCATCGTCAACCACATGGCCCGGTTTGCGGCC < 41bp 0.720623717658664 0.468947190644015 0.17234516 0.10823619 prediction 0.441247435317328 Functional Loss - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57171147 chr16:57171150 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_81467 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:57171060-57171191
64251 chr11 65686980 65686980 1 + G T COAD 65686977 + 65686957 65686997 41 CGAGAGAGGCCCCGAGATGCCGAGCAAGAAGAAGAAGTACA CGAGAGAGGCCCCGAGATGCCGATCAAGAAGAAGAAGTACA < 41bp 0.720621940579445 0.343247883527897 0.66705054 0.3247256 prediction 0.441243881158891 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65686977 chr11:65686980 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_81469 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:65686940-65686980
64251 chr6 25726721 25726721 1 - C T HNSC 25726724 - 25726704 25726744 41 AGGGAAGCAGGGAGGAAAAGCACGCGCCAAGTCTAAGTCTC AGGGAAGCAGGGAGGAAAAGCACACGCCAAGTCTAAGTCTC < 41bp 0.783976728512884 0.563359555449055 0.21947041 0.07417697 prediction 0.441234346127657 Functional Loss - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726724 chr6:25726721 nonsynonymous SNV 0.006 2 24 hm5C_associated_SNPs_81472 0 0 1 SUB1 POSTAR2 ENCODE chr6:25726685-25726745
64251 chr15 67073738 67073738 1 + C T BLCA 67073736 + 67073716 67073756 41 GCCTGCAGCACGCGCCCGAGCCCGACGCCGCCGACGGCCCC GCCTGCAGCACGCGCCCGAGCCTGACGCCGCCGACGGCCCC < 41bp 0.785978850007254 0.565362830185925 0.3535294 0.39561442 prediction 0.441232039642659 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073736 chr15:67073738 synonymous SNV . 0 23 hm5C_associated_SNPs_81474 0 0 1 YBX3 POSTAR2 ENCODE chr15:67073676-67073739
64251 chr15 68061972 68061972 1 + G A ESCA 68061969 + 68061949 68061989 41 GTCCTTCCAGTTGGAGAGTTCTCGGAGCCATTTGTACATTT GTCCTTCCAGTTGGAGAGTTCTCAGAGCCATTTGTACATTT < 41bp 0.720613677056336 0.485952540251184 0.38922495 0.05218157 prediction 0.441227354112671 Functional Loss - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:68061969 chr15:68061972 synonymous SNV . 0 24 hm5C_associated_SNPs_81476 0 0 1 PUM2 POSTAR2 ENCODE chr15:68061964-68062002
64251 chr2 120020707 120020707 1 + G A LUSC 120020704 + 120020684 120020724 41 TACGGCTGGACCCGCGCCTTCGAGGAGAGCCGCTACAAGTT TACGGCTGGACCCGCGCCTTCGAAGAGAGCCGCTACAAGTT < 41bp 0.795827971712036 0.575215317914415 0.93495727 0.86051655 prediction 0.441225307595241 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120020704 chr2:120020707 synonymous SNV . 0 24 hm5C_associated_SNPs_81478 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:120020672-120020720
64251 chr16 129527 129527 1 + C T SKCM 129525 + 129505 129545 41 CCTGCAGAGCAGCCACACAGCTCGTCCGATGCAGCCCAGGC CCTGCAGAGCAGCCACACAGCTTGTCCGATGCAGCCCAGGC < 41bp 0.787375476279586 0.566763875808223 0.14482886 0.13580096 prediction 0.441223200942727 Functional Loss - MPG ENSG00000103152 CDS Human protein_coding chr16:129525 chr16:129527 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_81479 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:129524-129564
64251 chr19 15940105 15940105 1 + G A UCEC 15940102 + 15940082 15940122 41 AAGAGATCCACCTGCGACCTCGGGTCCTCAGACCAGCCCAA AAGAGATCCACCTGCGACCTCGGATCCTCAGACCAGCCCAA < 41bp 0.720602014855985 0.486116996922912 0.40781474 0.20376852 prediction 0.441204029711969 Functional Loss - UCA1 ENSG00000214049 ncRNA_exonic Human processed_transcript chr19:15940102 chr19:15940105 . . 0 24 hm5C_associated_SNPs_81484 0 0 4 DDX3X POSTAR2 ENCODE chr19:15940037-15940126
64251 chr3 127983500 127983500 1 + C T UCEC 127983498 + 127983478 127983518 41 TCCATCCCAACGAGAGATCCCTCGGGACCGTTCCTCATGTC TCCATCCCAACGAGAGATCCCTTGGGACCGTTCCTCATGTC < 41bp 0.720600510513515 0.447813546787823 0.10438213 0.10055941 prediction 0.44120102102703 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127983498 chr3:127983500 nonsynonymous SNV 0.565 0 23 hm5C_associated_SNPs_81486 0 0 4 PPIG POSTAR2 ENCODE chr3:127983487-127983621
64251 chr7 156746890 156746890 1 + C T rs61740447 156746887 + 156746867 156746907 41 GACATGAATGACACCCTGACCTCCGCTCTCATGGGTGCCTG GACATGAATGACACCCTGACCTCTGCTCTCATGGGTGCCTG < 41bp 0.756496879736538 0.535901248890101 0.1653646 0.10297063 prediction 0.441191261692874 Functional Loss - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156746887 chr7:156746890 synonymous SNV . 0 24 hm5C_associated_SNPs_81490 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:156746871-156746892
64251 chr3 45048962 45048962 1 + G A COAD 45048959 + 45048939 45048979 41 ACTCTTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCTGGT ACTCTTCAGGAGGAGGCCTGCTCACTGGCCAGCTTGCTGGT < 41bp 0.786892525744296 0.566304513481896 0.34062222 0.18767735 prediction 0.4411760245248 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45048959 chr3:45048962 synonymous SNV . 0 24 hm5C_associated_SNPs_81492 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:45048933-45048962
64251 chr4 128724901 128724901 1 + C T UCEC 128724899 + 128724879 128724919 41 GATAAATGTGAAAGAAAACTCTCGGGCCTTGTTGCGTTTAT GATAAATGTGAAAGAAAACTCTTGGGCCTTGTTGCGTTTAT < 41bp 0.72058605338223 0.429517181801868 0.21641183 0.18243799 prediction 0.441172106764459 Functional Loss - HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128724899 chr4:128724901 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_81494 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:128724875-128724907
64251 chr3 128979638 128979638 1 + G A STAD 128979635 + 128979615 128979655 41 TCCTCCTTCATGTCAGAAATCTCGGATGAATTCAAGGTACC TCCTCCTTCATGTCAGAAATCTCAGATGAATTCAAGGTACC < 41bp 0.786932108829724 0.566350218319746 0.69340754 0.39366332 prediction 0.441163781019957 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128979635 chr3:128979638 synonymous SNV . 0 24 hm5C_associated_SNPs_81497 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:128979608-128979638
64251 chr1 28562926 28562926 1 + G C STAD 28562922 + 28562902 28562942 41 ATCCGGGAAGCCGGTGGGGCCTTCGGAAAGAGAGAGCAGGC ATCCGGGAAGCCGGTGGGGCCTTCCGAAAGAGAGAGCAGGC < 41bp 0.720578061549266 0.442893152563228 0.3123814 0.21189734 prediction 0.441156123098531 Functional Loss - ATPIF1 ENSG00000130770 CDS Human protein_coding chr1:28562922 chr1:28562926 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_81502 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr1:28562881-28562931
64251 chrX 47102868 47102868 1 + G T SKCM 47102865 + 47102845 47102885 41 TCGTGGTTCCTGTCTACCTGCGGGAGCGCACCCCTGCCCGT TCGTGGTTCCTGTCTACCTGCGGTAGCGCACCCCTGCCCGT < 41bp 0.937073732043678 0.716496602912125 0.9201515 0.18154955 prediction 0.441154258263105 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47102865 chrX:47102868 stopgain 1.000 0 24 hm5C_associated_SNPs_81506 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:47102838-47102872
64251 chr2 74074603 74074603 1 + G T rs116012954 74074601 + 74074581 74074621 41 GGGTAGCACAACAGAAGCAGCAGCAATTGGAACAGGAACAG GGGTAGCACAACAGAAGCAGCATCAATTGGAACAGGAACAG < 41bp 0.720575835665745 0.378023623873323 0.07163808 0.026765287 prediction 0.44115167133149 Functional Loss - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74074601 chr2:74074603 nonsynonymous SNV 0.951 2 23 hm5C_associated_SNPs_81507 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74074589-74074616
64251 chr17 41290680 41290680 1 + G A HNSC 41290677 + 41290657 41290697 41 CACCCCTTTCTGTGCAGGTGCTGGAAGCCCAGGAAGCACAC CACCCCTTTCTGTGCAGGTGCTGAAAGCCCAGGAAGCACAC < 41bp 0.761287665359158 0.540711932027677 0.557312 0.24612156 prediction 0.441151466662963 Functional Loss - NBR2 ENSG00000198496 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:41290677 chr17:41290680 . . 0 24 hm5C_associated_SNPs_81508 0 0 4 PPIG POSTAR2 ENCODE chr17:41290665-41290748
64251 chr9 74817603 74817603 1 + C T STAD 74817600 + 74817580 74817620 41 GCTGACCAAGTACACATTTCCTGCAGAACACAGATTCCAGA GCTGACCAAGTACACATTTCCTGTAGAACACAGATTCCAGA < 41bp 0.75162243517201 0.531053483818526 0.31604367 0.32770175 prediction 0.441137902706968 Functional Loss - GDA ENSG00000119125 CDS Human protein_coding chr9:74817600 chr9:74817603 nonsynonymous SNV 0.215 0 24 hm5C_associated_SNPs_81512 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr9:74817600-74817620
64251 chr6 44198148 44198148 1 + G A LUSC 44198145 + 44198125 44198165 41 GGCCTTCTGCCTGCCAGCTACACGGCCCCCATCATGAGTGG GGCCTTCTGCCTGCCAGCTACACAGCCCCCATCATGAGTGG < 41bp 0.790067649875633 0.569502159386409 0.49962533 0.32944834 prediction 0.441130980978448 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198145 chr6:44198148 synonymous SNV . 0 24 hm5C_associated_SNPs_81515 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44198126-44198160
64251 chr16 48395683 48395683 1 - T G UCEC 48395687 - 48395667 48395707 41 GATAGGAACACGCAAGCAAGCTGAAAATTTTGCTTACCGAC GATAGGAACACGCAAGCAAGCTGACAATTTTGCTTACCGAC < 41bp 0.720560380012733 0.304191663508195 0.24197522 0.07299954 prediction 0.441120760025465 Functional Loss - SIAH1 ENSG00000102910;ENSG00000196470 CDS Human other chr16:48395687 chr16:48395683 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_81517 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr16:48395668-48395689
64251 chr11 6411836 6411836 1 + G A rs199836262 6411833 + 6411813 6411853 41 TGTAGGAAGCGCGACAATGCCCCGCTACGGAGCGTCACTCC TGTAGGAAGCGCGACAATGCCCCACTACGGAGCGTCACTCC < 41bp 0.720552585503935 0.481846182089899 0.04651296 0.027509272 prediction 0.441105171007871 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6411833 chr11:6411836 nonsynonymous SNV 0.267 0 24 hm5C_associated_SNPs_81524 1 0 1 DDX3X POSTAR2 ENCODE chr11:6411719-6411848
64251 chr22 50615408 50615408 1 + C T UCEC 50615406 + 50615386 50615426 41 ACACCCCGCACAACTTCACGCGCGACCAGGCGCTGTACGCC ACACCCCGCACAACTTCACGCGTGACCAGGCGCTGTACGCC < 41bp 0.820589721329708 0.600047153821675 0.06434256 0.09633058 prediction 0.441085135016065 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615406 chr22:50615408 synonymous SNV . 0 23 hm5C_associated_SNPs_81532 0 0 1 RBM15 POSTAR2 ENCODE chr22:50615392-50615459
64251 chr19 55858779 55858779 1 + G A UCEC 55858776 + 55858756 55858796 41 GCCTACGGCTGGTGGTCAGCCACGGCTCCATCGACCTGGAT GCCTACGGCTGGTGGTCAGCCACAGCTCCATCGACCTGGAT < 41bp 0.791103934678932 0.570562000242065 0.28812382 0.11736116 prediction 0.441083868873734 Functional Loss - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55858776 chr19:55858779 nonsynonymous SNV 0.949 4 24 hm5C_associated_SNPs_81534 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:55858756-55858788
64251 chr3 128525422 128525422 1 + G A GBM 128525419 + 128525399 128525439 41 TGTTGGGAAACAAGATTGACCTCGAAAACAGACAAGTAAGT TGTTGGGAAACAAGATTGACCTCAAAAACAGACAAGTAAGT < 41bp 0.720537853803008 0.499679152936255 0.124441355 0.013913214 prediction 0.441075707606015 Functional Loss - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128525419 chr3:128525422 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_81535 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:128525352-128525434
64251 chr8 145067398 145067398 1 + G A rs373972536 145067395 + 145067375 145067415 41 TCCTGTCCCAGCTCCCCAGCCTGGCGTAGAGCACCCCTCCC TCCTGTCCCAGCTCCCCAGCCTGACGTAGAGCACCCCTCCC < 41bp 0.744146306921449 0.523611900755039 0.82570446 0.3274763 prediction 0.441068812332821 Functional Loss - GRINA ENSG00000178719 UTR3 Human protein_coding chr8:145067395 chr8:145067398 . . 0 24 hm5C_associated_SNPs_81537 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145067337-145067459
64251 chr1 220835410 220835410 1 + C T UCEC 220835408 + 220835388 220835428 41 GATGGAAGTCTGCAAGTTGCCACGACTGTCACTTAATGGGG GATGGAAGTCTGCAAGTTGCCATGACTGTCACTTAATGGGG < 41bp 0.843185212766135 0.622651404306107 0.26509362 0.23112893 prediction 0.441067616920055 Functional Loss - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220835408 chr1:220835410 stopgain 0.996 1 23 hm5C_associated_SNPs_81538 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:220835406-220835457
64251 chr12 110924408 110924408 1 + C T PRAD 110924405 + 110924385 110924425 41 GAAACAGCATTACCCTTGCACTACATGGCGACATCAACTGG GAAACAGCATTACCCTTGCACTATATGGCGACATCAACTGG < 41bp 0.732318165685323 0.511785779950553 0.48744705 0.2788033 prediction 0.441064771469541 Functional Loss - FAM216A ENSG00000204856 CDS Human protein_coding chr12:110924405 chr12:110924408 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_81539 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:110924391-110924423
64251 chr3 56627978 56627978 1 + C T SKCM 56627976 + 56627956 56627996 41 GTATGTATCTTGCCAGCTTTCTCCGTTCTATGACTGCTCTC GTATGTATCTTGCCAGCTTTCTTCGTTCTATGACTGCTCTC < 41bp 0.720531581639518 0.431830270233769 0.34931746 0.20877936 prediction 0.441063163279036 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56627976 chr3:56627978 synonymous SNV . 0 23 hm5C_associated_SNPs_81541 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:56627971-56628042
64251 chr9 102730858 102730858 1 + G A UCEC 102730855 + 102730835 102730875 41 TGGTGGGGTGTTGGGCTTCACAGGTGGAAAATTGATACAAA TGGTGGGGTGTTGGGCTTCACAGATGGAAAATTGATACAAA < 41bp 0.731842032728365 0.51131106384341 0.9041842 0.81829673 prediction 0.441061937769909 Functional Loss - STX17 ENSG00000136874 CDS Human protein_coding chr9:102730855 chr9:102730858 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81542 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr9:102730847-102730868
64251 chr19 41096235 41096235 1 + C T SKCM 41096233 + 41096213 41096253 41 GGGCTCCCGGCGGCTCGGCTCTCGGCCCCGGCGCTACCTGC GGGCTCCCGGCGGCTCGGCTCTTGGCCCCGGCGCTACCTGC < 41bp 0.837475090801837 0.61695016879321 0.744396 0.2514152 prediction 0.441049844017254 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41096233 chr19:41096235 nonsynonymous SNV 0.006 3 23 hm5C_associated_SNPs_81549 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:41096209-41096242
64251 chr6 17551823 17551823 1 + G T STAD 17551821 + 17551801 17551841 41 AAATGAACATACTTATCCCTCAGGATGGTGATTATGTAAGT AAATGAACATACTTATCCCTCATGATGGTGATTATGTAAGT < 41bp 0.72051591252275 0.390393997203548 0.32554293 0.050202966 prediction 0.4410318250455 Functional Loss - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17551821 chr6:17551823 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_81553 0 0 1 PPIG POSTAR2 ENCODE chr6:17551779-17551829
64251 chr1 146714354 146714354 1 + A C rs147494800 146714350 + 146714330 146714370 41 CGGGGCGGGGCCTCTACCGGCCCGATGGAGCGCGCGGGCGC CGGGGCGGGGCCTCTACCGGCCCGCTGGAGCGCGCGGGCGC < 41bp 0.785256450546037 0.564742871948237 0.7610327 0.50672233 prediction 0.441027157195599 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146714350 chr1:146714354 nonsynonymous SNV 0.010 1 25 hm5C_associated_SNPs_81554 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:146714340-146714360
64251 chr2 74687569 74687569 1 + G A UCEC 74687566 + 74687546 74687586 41 CCCCTCATCAGGAGGGTGAGCCCGGGGCAGGGGTGACCCCT CCCCTCATCAGGAGGGTGAGCCCAGGGCAGGGGTGACCCCT < 41bp 0.795930440638029 0.575418114728742 0.95686245 0.95042807 prediction 0.441024651818574 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687566 chr2:74687569 nonsynonymous SNV 0.054 0 24 hm5C_associated_SNPs_81557 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:74687551-74687580
64251 chr19 57133099 57133099 1 + C T UCEC 57133097 + 57133077 57133117 41 GAAGCTCGTCCCTGATAAAGCACCAAAGGATCCACACGGGA GAAGCTCGTCCCTGATAAAGCATCAAAGGATCCACACGGGA < 41bp 0.720511588484802 0.444497537087423 0.14995998 0.10292795 prediction 0.441023176969603 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133097 chr19:57133099 synonymous SNV . 0 23 hm5C_associated_SNPs_81558 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57133072-57133110
64251 chr7 116436149 116436149 1 + C T UCEC 116436147 + 116436127 116436167 41 CGCTGATGATGAGGTGGACACACGACCAGCCTCCTTCTGGG CGCTGATGATGAGGTGGACACATGACCAGCCTCCTTCTGGG < 41bp 0.807538409271328 0.587041432191231 0.34998244 0.27212924 prediction 0.440993954160194 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116436147 chr7:116436149 stopgain 0.501 0 23 hm5C_associated_SNPs_81562 1 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:116436125-116436174
64251 chr10 70496795 70496795 1 + C T STAD 70496792 + 70496772 70496812 41 ACAAGCCGCAGCTGCAGCAGCTGCATTACAACAGGTAAATC ACAAGCCGCAGCTGCAGCAGCTGTATTACAACAGGTAAATC < 41bp 0.720495910500595 0.494218301045438 0.13210022 0.08613324 prediction 0.440991821001191 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70496792 chr10:70496795 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_81563 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:70496776-70496805
64251 chr20 58519515 58519515 1 + C T UCEC 58519513 + 58519493 58519533 41 GAACAAAACGGAAGCCGTGCCCCGAGTGGGAGGACTTCTTG GAACAAAACGGAAGCCGTGCCCTGAGTGGGAGGACTTCTTG < 41bp 0.845951774532015 0.625457623688883 0.17583206 0.10890669 prediction 0.440988301686263 Functional Loss - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519513 chr20:58519515 stopgain 0.000 0 23 hm5C_associated_SNPs_81564 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:58519497-58519532
64251 chr16 54967424 54967424 1 + G A LGG 54967421 + 54967401 54967441 41 CTCTCCATGCCCACCGTGTCCCGGGCCCATAGCCGGGCAAG CTCTCCATGCCCACCGTGTCCCGAGCCCATAGCCGGGCAAG < 41bp 0.805192263775335 0.584703454033628 0.81055033 0.2908457 prediction 0.440977619483413 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967421 chr16:54967424 nonsynonymous SNV 0.601 1 24 hm5C_associated_SNPs_81567 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:54967396-54967432
64251 chr11 5632148 5632148 1 + A C rs139191411 5632147 + 5632127 5632167 41 ACTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGGTAAG ACTGTAGTGTCCTGGGCTCCCCGCACTTCTCCTCTGGTAAG < 41bp 0.802369475927708 0.581883406884076 0.25246248 0.109589845 prediction 0.440972138087265 Functional Loss - TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632147 chr11:5632148 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_81569 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:5632123-5632162
64251 chr17 65914934 65914934 1 + G T HNSC 65914931 + 65914911 65914951 41 TATGGCGGCCAAGGCTCCTCCAGGAGGAGGGACTACACGGA TATGGCGGCCAAGGCTCCTCCAGTAGGAGGGACTACACGGA < 41bp 0.720476607190043 0.342256852500183 0.89134914 0.53239614 prediction 0.440953214380086 Functional Loss - BPTF ENSG00000171634 CDS Human protein_coding chr17:65914931 chr17:65914934 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_81575 0 0 7 AARS POSTAR2 ENCODE chr17:65914875-65914938
64251 chr15 91185245 91185245 1 + C T SKCM 91185242 + 91185222 91185262 41 GGTCAGCCTGAACGTGGACACTCCATTTCCACTGGAAGAGG GGTCAGCCTGAACGTGGACACTCTATTTCCACTGGAAGAGG < 41bp 0.744752870948997 0.524280173862114 0.935966 0.69050425 prediction 0.440945394173767 Functional Loss - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91185242 chr15:91185245 nonsynonymous SNV 0.048 0 24 hm5C_associated_SNPs_81579 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr15:91185240-91185260
64251 chr17 25628904 25628904 1 + C T UCEC 25628901 + 25628881 25628921 41 AAATTGGACTGTTGCTTTTGCTCCAGATGGTTCATACTTTG AAATTGGACTGTTGCTTTTGCTCTAGATGGTTCATACTTTG < 41bp 0.738832204038249 0.518366228372291 0.67247516 0.34047997 prediction 0.440931951331917 Functional Loss - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628901 chr17:25628904 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_81583 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:25628872-25628956
64251 chr14 75359661 75359661 1 + G A UCEC 75359658 + 75359638 75359678 41 ACTCAGATGCCACCGGTGCCCTCGCCCTCACAGCCTCCTTC ACTCAGATGCCACCGGTGCCCTCACCCTCACAGCCTCCTTC < 41bp 0.792992069727286 0.572526545111271 0.05626437 0.050421 prediction 0.44093104923203 Functional Loss - DLST ENSG00000119689 CDS Human protein_coding chr14:75359658 chr14:75359661 synonymous SNV . 0 24 hm5C_associated_SNPs_81585 0 0 3 BUD13 POSTAR2 ENCODE chr14:75359641-75359704
64251 chr17 57842391 57842391 1 + C T LGG 57842389 + 57842369 57842409 41 AATGCAATTCAGTTAATTTTCCCGAACCACCCTATCCTGAT AATGCAATTCAGTTAATTTTCCTGAACCACCCTATCCTGAT < 41bp 0.72046483409701 0.430393374587438 0.07984802 0.041139066 prediction 0.440929668194021 Functional Loss - VMP1 ENSG00000062716 CDS Human protein_coding chr17:57842389 chr17:57842391 synonymous SNV . 0 23 hm5C_associated_SNPs_81586 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr17:57842350-57842392
64251 chr13 113536304 113536304 1 + G A COAD 113536301 + 113536281 113536321 41 CCACGGAGCCCCCACCCATCCTCGGCGGTTCCCATCACCAC CCACGGAGCCCCCACCCATCCTCAGCGGTTCCCATCACCAC < 41bp 0.790089999686088 0.569625634679553 0.12776545 0.05323592 prediction 0.44092873001307 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536301 chr13:113536304 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_81587 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:113536261-113536322
64251 chr2 27164917 27164917 1 + G A OV 27164914 + 27164894 27164934 41 CCCGCAAGGGCCGCATTATTCCCGGAGCCGATGCTGATGTG CCCGCAAGGGCCGCATTATTCCCAGAGCCGATGCTGATGTG < 41bp 0.720455436536586 0.471703478080664 0.86483634 0.43717667 prediction 0.440910873073173 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27164914 chr2:27164917 nonsynonymous SNV 0.519 5 24 hm5C_associated_SNPs_81590 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:27164897-27164929
64251 chr21 44452765 44452765 1 + G C rs141253574 44452761 + 44452741 44452781 41 AAAGAGAGCACTGCCTGAACCTCGGTGGCACTGGGAAGCTC AAAGAGAGCACTGCCTGAACCTCGCTGGCACTGGGAAGCTC < 41bp 0.826692119946423 0.606238205677875 0.33894867 0.25600177 prediction 0.440907828537096 Functional Loss - PKNOX1 ENSG00000160199 UTR3 Human protein_coding chr21:44452761 chr21:44452765 . . 0 25 hm5C_associated_SNPs_81591 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:44452731-44452797
64251 chr1 161173236 161173236 1 + G T LUAD 161173234 + 161173214 161173254 41 TTTGACTCCCCAGAGGTGTTCGGCAGTGGCAGCCAGATGTG TTTGACTCCCCAGAGGTGTTCGTCAGTGGCAGCCAGATGTG < 41bp 0.835409635177328 0.614956327886131 0.8842555 0.4123596 prediction 0.440906614582393 Functional Loss - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161173234 chr1:161173236 synonymous SNV . 0 23 hm5C_associated_SNPs_81592 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:161173223-161173249
64251 chr4 100534123 100534123 1 + G A rs145444300 100534120 + 100534100 100534140 41 TTAATCGCAGCCACCCCTGACGAGGGGGAGGAGAACCTTGA TTAATCGCAGCCACCCCTGACGAAGGGGAGGAGAACCTTGA < 41bp 0.758923601377744 0.53847665381208 0.8996273 0.3732465 prediction 0.440893895131329 Functional Loss - MTTP ENSG00000138823 CDS Human protein_coding chr4:100534120 chr4:100534123 synonymous SNV . 0 24 hm5C_associated_SNPs_81596 1 0 5 LIN28B POSTAR2 ENCODE chr4:100534069-100534130
64251 chr11 61539102 61539102 1 + C T HNSC 61539100 + 61539080 61539120 41 AGCCCTGCCTCTGCACCCCACTCGAGCCCCATCGCCACCCT AGCCCTGCCTCTGCACCCCACTTGAGCCCCATCGCCACCCT < 41bp 0.853291156820105 0.632847100470494 0.36487702 0.07469821 prediction 0.440888112699223 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61539100 chr11:61539102 stopgain 0.658 1 23 hm5C_associated_SNPs_81598 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61539079-61539142
64251 chr12 111085646 111085646 1 + A C BRCA 111085642 + 111085622 111085662 41 TGCAGAGGCAGGCTTCAGAGCTCCACCAGCCATCAATGCCA TGCAGAGGCAGGCTTCAGAGCTCCCCCAGCCATCAATGCCA < 41bp 0.720442322625815 0.302245492774694 0.754506 0.08043283 prediction 0.440884645251631 Functional Loss - TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111085642 chr12:111085646 nonsynonymous SNV 0.117 0 25 hm5C_associated_SNPs_81601 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:111085628-111085661
64251 chr17 73258942 73258942 1 + G A CESC 73258939 + 73258919 73258959 41 AAAGTACTGGCCAGATCCCTCATGATTCAGGTAAACAGCAC AAAGTACTGGCCAGATCCCTCATAATTCAGGTAAACAGCAC < 41bp 0.762816619489839 0.542377556759008 0.31752583 0.24544361 prediction 0.440878125461664 Functional Loss - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73258939 chr17:73258942 nonsynonymous SNV 0.331 0 24 hm5C_associated_SNPs_81603 0 0 6 BUD13 POSTAR2 ENCODE chr17:73258926-73258948
64251 chr5 154330431 154330431 1 + G A UCEC 154330428 + 154330408 154330448 41 AAGTGCTTCTCTTGACATTTCTCGAAAATGGGAGAAGAAGA AAGTGCTTCTCTTGACATTTCTCAAAAATGGGAGAAGAAGA < 41bp 0.738936332170748 0.518498011345967 0.84644115 0.41542193 prediction 0.440876641649562 Functional Loss - MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330428 chr5:154330431 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_81605 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr5:154330400-154330440
64251 chr4 95539215 95539215 1 + C T rs116241517 95539213 + 95539193 95539233 41 TAGCTTCCACACGGAGCATGCCCGAGAGCCTGGACAGCCCA TAGCTTCCACACGGAGCATGCCTGAGAGCCTGGACAGCCCA < 41bp 0.720436533008056 0.451581119561346 0.09259635 0.05693823 prediction 0.440873066016112 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95539213 chr4:95539215 synonymous SNV . 0 23 hm5C_associated_SNPs_81606 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:95539170-95539227
64251 chr16 69354158 69354158 1 + G A BLCA 69354155 + 69354135 69354175 41 GAAAATGAGAGTGAGGCCGCCCGGAGGATCAAAACGGAGTT GAAAATGAGAGTGAGGCCGCCCGAAGGATCAAAACGGAGTT < 41bp 0.777352877471575 0.556924132377046 0.70203143 0.24995854 prediction 0.440857490189059 Functional Loss - VPS4A ENSG00000132612;ENSG00000260914 CDS Human other chr16:69354155 chr16:69354158 synonymous SNV . 0 24 hm5C_associated_SNPs_81609 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:69354141-69354161
64251 chr1 234509472 234509472 1 + C T SKCM 234509470 + 234509450 234509490 41 GGGCGCGCGTGGACTATGGGCCCGGGAGGTCCCTTACTGTC GGGCGCGCGTGGACTATGGGCCTGGGAGGTCCCTTACTGTC < 41bp 0.771476563292419 0.55104848152967 0.25941658 0.34975004 prediction 0.440856163525497 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234509470 chr1:234509472 nonsynonymous SNV 0.120 1 23 hm5C_associated_SNPs_81610 0 0 2 BUD13 POSTAR2 ENCODE chr1:234509403-234509485
64251 chr18 46385959 46385959 1 + G A rs142559064 46385956 + 46385936 46385976 41 AGGGGGCCTGGCAGGCGGCCCACGGGCAGCTGGGGCCCTGG AGGGGGCCTGGCAGGCGGCCCACAGGCAGCTGGGGCCCTGG < 41bp 0.748842583019105 0.528414943951468 0.43373936 0.15035272 prediction 0.440855278135272 Functional Loss - CTIF ENSG00000134030 UTR3 Human protein_coding chr18:46385956 chr18:46385959 . . 0 24 hm5C_associated_SNPs_81611 0 0 4 DDX55 POSTAR2 ENCODE chr18:46385939-46385976
64251 chr5 36183953 36183953 1 + G T SARC 36183950 + 36183930 36183970 41 TATTGTTTACAGATTAGTGACAAGAGCTGGGGTTAGGATCC TATTGTTTACAGATTAGTGACAATAGCTGGGGTTAGGATCC < 41bp 0.720425933616285 0.440383238214887 0.24381754 0.08535609 prediction 0.44085186723257 Functional Loss - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36183950 chr5:36183953 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_81614 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:36183940-36183960
64251 chr18 12325224 12325224 1 + G T LUAD 12325222 + 12325202 12325242 41 GCTGGGCGGCGGCACGGGCTCAGGCATGGGCACGCTGCTCA GCTGGGCGGCGGCACGGGCTCATGCATGGGCACGCTGCTCA < 41bp 0.906519195603762 0.686095304043115 0.79070866 0.2474331 prediction 0.440847783121294 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325222 chr18:12325224 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_81616 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:12325183-12325228
64251 chrX 9900341 9900341 1 + G T LUSC 9900339 + 9900319 9900359 41 GGGGAGCCCCAGAGCTGCCCCGGGAGGGCCGGGGCCGAGCG GGGGAGCCCCAGAGCTGCCCCGTGAGGGCCGGGGCCGAGCG < 41bp 0.914017657208289 0.693595629865687 0.79768765 0.27902722 prediction 0.440844054685204 Functional Loss - SHROOM2 ENSG00000146950 CDS Human protein_coding chrX:9900339 chrX:9900341 synonymous SNV . 0 23 hm5C_associated_SNPs_81618 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chrX:9900340-9900360
64251 chr21 30699435 30699435 1 + G T COAD 30699433 + 30699413 30699453 41 ATGGCTCAGAACAGATCTCACAGAAACGGTCTGAGTGTCCG ATGGCTCAGAACAGATCTCACATAAACGGTCTGAGTGTCCG < 41bp 0.7204214576919 0.375169754607048 0.3426482 0.18150795 prediction 0.440842915383801 Functional Loss - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699433 chr21:30699435 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_81620 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:30699408-30699504
64251 chr8 90801560 90801560 1 + G T LUSC 90801557 + 90801537 90801577 41 TGTATTTTGTAGGAAAAGCTCAAGACTGTTATTTTATGAAG TGTATTTTGTAGGAAAAGCTCAATACTGTTATTTTATGAAG < 41bp 0.720413247630782 0.342329149943755 0.38729858 0.33498323 prediction 0.440826495261563 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90801557 chr8:90801560 nonsynonymous SNV 0.270 1 24 hm5C_associated_SNPs_81628 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:90801557-90801588
64251 chr16 3117465 3117465 1 + G T SARC 3117463 + 3117443 3117483 41 GGGGTTGGGGGCCTGGGTCTCAGCGTGTGACACTGAGGACA GGGGTTGGGGGCCTGGGTCTCATCGTGTGACACTGAGGACA < 41bp 0.892130271987801 0.671735373332541 0.9292521 0.54106355 prediction 0.44078979731052 Functional Loss - IL32 ENSG00000008517 CDS Human protein_coding chr16:3117463 chr16:3117465 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_81635 0 0 13 BUD13 POSTAR2 ENCODE chr16:3117439-3117484
64251 chr7 42976962 42976962 1 + G T LUSC 42976960 + 42976940 42976980 41 CTGAATGTGGTCACCTGAAACAGAAACATGTCCTTTGTGCC CTGAATGTGGTCACCTGAAACATAAACATGTCCTTTGTGCC < 41bp 0.720394104816094 0.392207945844699 0.68498206 0.04554504 prediction 0.440788209632187 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42976960 chr7:42976962 nonsynonymous SNV 0.901 1 23 hm5C_associated_SNPs_81637 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr7:42976921-42977034
64251 chr4 184431587 184431587 1 + G A SARC 184431584 + 184431564 184431604 41 TACAGATTGTTACACAAATGCTCGAATTGGTGGAAAATCGG TACAGATTGTTACACAAATGCTCAAATTGGTGGAAAATCGG < 41bp 0.723857712714256 0.503464429795141 0.21983945 0.12912634 prediction 0.440786565838229 Functional Loss - ING2 ENSG00000168556 CDS Human protein_coding chr4:184431584 chr4:184431587 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_81639 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:184431578-184431610
64251 chr6 42906384 42906384 1 + G T rs9471969 42906382 + 42906362 42906402 41 AAGAAGTCCAAGAAGAAGAGCAGCAGGGCCAAGGCAGCAGG AAGAAGTCCAAGAAGAAGAGCATCAGGGCCAAGGCAGCAGG < 41bp 0.720393196847124 0.376894706858909 0.75123566 0.6200638 prediction 0.440786393694248 Functional Loss - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42906382 chr6:42906384 nonsynonymous SNV 0.990 0 23 hm5C_associated_SNPs_81640 0 0 7 TAF15 POSTAR2 GSE43294,GSM1060206 chr6:42906380-42906400
64251 chr11 63756170 63756170 1 + G A UCEC 63756167 + 63756147 63756187 41 GTGTCAGAGCGGCTGGAGCTCTCGGTCCTATACAAGGAGTA GTGTCAGAGCGGCTGGAGCTCTCAGTCCTATACAAGGAGTA < 41bp 0.784498207372059 0.564105963261561 0.17657086 0.17670438 prediction 0.440784488220997 Functional Loss - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63756167 chr11:63756170 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_81641 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr11:63756129-63756184
64251 chr1 173455477 173455477 1 + C T BLCA 173455475 + 173455455 173455495 41 GCAGGAACTTTGATGAGATTCTCAGGGTAGTCATCTCTCTC GCAGGAACTTTGATGAGATTCTTAGGGTAGTCATCTCTCTC < 41bp 0.85125172751557 0.630882382843962 0.10784772 0.18366942 prediction 0.440738689343215 Functional Loss - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173455475 chr1:173455477 synonymous SNV . 0 23 hm5C_associated_SNPs_81649 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:173455400-173455490
64251 chr22 39884033 39884033 1 + G A LUAD 39884030 + 39884010 39884050 41 CTGCTGGACGTGCGCTTCCACGAGCTGGGCGACGTGGTGGA CTGCTGGACGTGCGCTTCCACGAACTGGGCGACGTGGTGGA < 41bp 0.720369255689588 0.461879153279502 0.4097407 0.28203452 prediction 0.440738511379176 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884030 chr22:39884033 synonymous SNV . 0 24 hm5C_associated_SNPs_81650 0 0 1 SF3B1 POSTAR2 ENCODE chr22:39884013-39884044
64251 chr4 3318625 3318625 1 + C T STAD 3318623 + 3318603 3318643 41 GGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTC GGCTCCATTGAGCTTCCTTCCATGAGCTCCAACCTGGAGTC < 41bp 0.815337060833795 0.594968107254168 0.39305562 0.36117202 prediction 0.440737907159254 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3318623 chr4:3318625 nonsynonymous SNV 0.391 4 23 hm5C_associated_SNPs_81651 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:3318595-3318626
64251 chr16 23700596 23700596 1 + C T SKCM 23700593 + 23700573 23700613 41 GATAACAGCGTGGGGGTGCTCTTCAATGACTCAACACGCCT GATAACAGCGTGGGGGTGCTCTTTAATGACTCAACACGCCT < 41bp 0.737441576966369 0.51707304430893 0.87109184 0.17823747 prediction 0.440737065314878 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700593 chr16:23700596 synonymous SNV . 0 24 hm5C_associated_SNPs_81652 0 0 19 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:23700569-23700627
64251 chr9 131468080 131468080 1 + G T COAD 131468078 + 131468058 131468098 41 CTCGGCACCTAGAGGCTCTCCGGAGGCAGCTGCATGTGGAG CTCGGCACCTAGAGGCTCTCCGTAGGCAGCTGCATGTGGAG < 41bp 0.720367724222013 0.355567482474065 0.92423284 0.7570911 prediction 0.440735448444026 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131468078 chr9:131468080 synonymous SNV . 0 23 hm5C_associated_SNPs_81653 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr9:131468080-131468100
64251 chr12 104335645 104335645 1 + C T KIRC 104335643 + 104335623 104335663 41 ATCTCCCCTTGAATGTTTCCCGCGAGACTCTTCAGCAACAT ATCTCCCCTTGAATGTTTCCCGTGAGACTCTTCAGCAACAT < 41bp 0.857578187055038 0.637216769328583 0.058148563 0.018437237 prediction 0.44072283545291 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104335643 chr12:104335645 synonymous SNV . 0 23 hm5C_associated_SNPs_81658 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104335617-104335667
64251 chr16 58314605 58314605 1 + C T LUAD 58314603 + 58314583 58314623 41 CACCGAAGTTCAGGACTCCTCTCAGAACCCACAGATCGAAC CACCGAAGTTCAGGACTCCTCTTAGAACCCACAGATCGAAC < 41bp 0.720356913882992 0.453932484627911 0.039725184 0.038373172 prediction 0.440713827765984 Functional Loss - PRSS54 ENSG00000103023 CDS Human protein_coding chr16:58314603 chr16:58314605 synonymous SNV . 0 23 hm5C_associated_SNPs_81661 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:58314583-58314621
64251 chr1 179045493 179045493 1 + A C rs116166770 179045492 + 179045472 179045512 41 TGAAACTGGGAACAACTACTCAGAAGCTCATTTATTTGCTT TGAAACTGGGAACAACTACTCCGAAGCTCATTTATTTGCTT < 41bp 0.732790068699371 0.512434470593466 0.8898 0.45627064 prediction 0.44071119621181 Functional Loss - FAM20B ENSG00000116199 UTR3 Human protein_coding chr1:179045492 chr1:179045493 . . 0 22 hm5C_associated_SNPs_81662 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:179045301-179045560
64251 chr14 100996402 100996402 1 + G A rs144675918 100996399 + 100996379 100996419 41 GCTTTTTGTCACTGAACCTTCCCGATGCCAGCTGGGCTCTT GCTTTTTGTCACTGAACCTTCCCAATGCCAGCTGGGCTCTT < 41bp 0.720353907431914 0.48129110003205 0.110829294 0.063156545 prediction 0.440707814863829 Functional Loss - WDR25 ENSG00000176473 UTR3 Human protein_coding chr14:100996399 chr14:100996402 . . 0 24 hm5C_associated_SNPs_81663 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr14:100996380-100996409
64251 chr3 170110118 170110118 1 + G T ESCA 170110116 + 170110096 170110136 41 AACTCCAAGATGAACTCAGACAGGAACGGGAAGCAAGACAG AACTCCAAGATGAACTCAGACATGAACGGGAAGCAAGACAG < 41bp 0.87860938361733 0.658256326752084 0.34406984 0.105223775 prediction 0.440706113730492 Functional Loss - SKIL ENSG00000136603 CDS Human protein_coding chr3:170110116 chr3:170110118 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_81664 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:170110035-170110162
64251 chr1 150476838 150476838 1 + G A KIRC 150476835 + 150476815 150476855 41 ACGTGCACCTCCACGATGCCCTGGGCCGGCCACATCAGTGT ACGTGCACCTCCACGATGCCCTGAGCCGGCCACATCAGTGT < 41bp 0.80030865666362 0.579960622827638 0.13322994 0.05293438 prediction 0.440696067671964 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150476835 chr1:150476838 nonsynonymous SNV 0.880 3 24 hm5C_associated_SNPs_81665 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:150476825-150476851
64251 chr5 137721848 137721848 1 + G T UCEC 137721845 + 137721825 137721865 41 TCAAAGAAATTAAAAGGAGACAGGGGTGAAGTAGACAGTAA TCAAAGAAATTAAAAGGAGACAGTGGTGAAGTAGACAGTAA < 41bp 0.720347820323105 0.331041536162861 0.88804936 0.22470337 prediction 0.44069564064621 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137721845 chr5:137721848 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_81666 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:137721830-137721855
64251 chr20 62505057 62505057 1 + G A UCEC 62505054 + 62505034 62505074 41 TTGTCACTCTGCGCCAGGTCCTGGCAGCCAAGGAGAGGCAC TTGTCACTCTGCGCCAGGTCCTGACAGCCAAGGAGAGGCAC < 41bp 0.772126115422824 0.551779573867166 0.3523919 0.27855718 prediction 0.440693083111316 Functional Loss - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62505054 chr20:62505057 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_81668 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:62505032-62505062
64251 chr5 14713879 14713879 1 + G A rs543866010 14713876 + 14713856 14713896 41 ATCCGAGAGCCAGGGGCTGCCTAGGACCCTGGCCTTGCTGT ATCCGAGAGCCAGGGGCTGCCTAAGACCCTGGCCTTGCTGT < 41bp 0.782262098701027 0.561915758030625 0.5589343 0.43339902 prediction 0.440692681340805 Functional Loss - LOC100130744 ENSG00000154122 intronic Human protein_coding chr5:14713876 chr5:14713879 . . 0 24 hm5C_associated_SNPs_81669 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:14713795-14713891
64251 chr15 58840744 58840744 1 + G A UCEC 58840741 + 58840721 58840761 41 GCAAGAGCAAGAGGCTCTTCCTCGTAACGCGAGCCCAGTCC GCAAGAGCAAGAGGCTCTTCCTCATAACGCGAGCCCAGTCC < 41bp 0.803228354207051 0.58288551866881 0.15986833 0.09421402 prediction 0.440685671076481 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58840741 chr15:58840744 nonsynonymous SNV 0.666 1 24 hm5C_associated_SNPs_81672 0 0 2 SND1 POSTAR2 ENCODE chr15:58840710-58840765
64251 chr19 4359199 4359199 1 + G A rs79831308 4359196 + 4359176 4359216 41 TCTACAAGGGTTCCCCTGACCTCGTGAGGCTCCAGGAACCC TCTACAAGGGTTCCCCTGACCTCATGAGGCTCCAGGAACCC < 41bp 0.781427251776325 0.561087044521527 0.17250803 0.0998483 prediction 0.440680414509595 Functional Loss - MPND ENSG00000008382 CDS Human protein_coding chr19:4359196 chr19:4359199 nonsynonymous SNV 0.929 1 24 hm5C_associated_SNPs_81675 0 0 1 PPIG POSTAR2 ENCODE chr19:4359196-4359229
64251 chr11 86123500 86123500 1 + G A SKCM 86123497 + 86123477 86123517 41 CTTAAGCAAGAGGAATATTCCCGGAGTCTCCTGAAACAAAT CTTAAGCAAGAGGAATATTCCCGAAGTCTCCTGAAACAAAT < 41bp 0.724121208881904 0.503792740627349 0.4549508 0.06937453 prediction 0.440656936509111 Functional Loss - CCDC81 ENSG00000149201 CDS Human protein_coding chr11:86123497 chr11:86123500 synonymous SNV . 0 24 hm5C_associated_SNPs_81682 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:86123490-86123515
64251 chr1 82434943 82434943 1 + T C LIHC 82434942 + 82434922 82434962 41 TCCCTTGTTTGCCTGGCTATCTGCATCTTCACCTTCTGCTT TCCCTTGTTTGCCTGGCTATCCGCATCTTCACCTTCTGCTT < 41bp 0.799903344012958 0.579578771126514 0.07237673 0.074209124 prediction 0.440649145772888 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82434942 chr1:82434943 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_81684 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:82434918-82434949
64251 chr5 135388740 135388740 1 + C T SKCM 135388738 + 135388718 135388758 41 ATCAACGGGAAGGCGATCATCTCCAATAAAGACATCCTAGC ATCAACGGGAAGGCGATCATCTTCAATAAAGACATCCTAGC < 41bp 0.876519482968709 0.656207729702846 0.9762503 0.5205416 prediction 0.440623506531726 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135388738 chr5:135388740 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_81690 0 0 1 SND1 POSTAR2 ENCODE chr5:135388637-135388740
64251 chrX 75649459 75649459 1 + C T SKCM 75649457 + 75649437 75649477 41 GCCTCTGATGGATCGGACACCTCCGTGCCGCCCACTCCTGG GCCTCTGATGGATCGGACACCTTCGTGCCGCCCACTCCTGG < 41bp 0.800120741058669 0.579810441450478 0.19713119 0.08900365 prediction 0.440620599216384 Functional Loss - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75649457 chrX:75649459 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_81692 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:75649458-75649459
64251 chr7 5104405 5104405 1 + C T UCEC 5104403 + 5104383 5104423 41 CGAGTGTGGGAAATTCTTTTCTCGGGTGTCATACCTCACTA CGAGTGTGGGAAATTCTTTTCTTGGGTGTCATACCTCACTA < 41bp 0.828217303744482 0.60790732175958 0.15316597 0.10001728 prediction 0.440619963969803 Functional Loss - RBAK ENSG00000146587 CDS Human protein_coding chr7:5104403 chr7:5104405 nonsynonymous SNV 0.947 4 23 hm5C_associated_SNPs_81694 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:5104384-5104406
64251 chr14 24030759 24030759 1 + G T SARC 24030757 + 24030737 24030777 41 ACTGGGGCTGCTTCTGAAAGCTGGGCTGCTTCTTTGCTTTC ACTGGGGCTGCTTCTGAAAGCTTGGCTGCTTCTTTGCTTTC < 41bp 0.720307007223933 0.40204580850202 0.5060432 0.23426652 prediction 0.440614014447866 Functional Loss - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24030757 chr14:24030759 nonsynonymous SNV 0.005 0 23 hm5C_associated_SNPs_81697 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:24030753-24030767
64251 chr12 104378601 104378601 1 + C T rs4135120 104378598 + 104378578 104378618 41 GCCCAAGACAAAGTTCATTACTACATAAAACTGAAGGACTT GCCCAAGACAAAGTTCATTACTATATAAAACTGAAGGACTT < 41bp 0.758298399348552 0.537991503256318 0.926463 0.8769274 prediction 0.440613792184468 Functional Loss - TDG ENSG00000139372 CDS Human protein_coding chr12:104378598 chr12:104378601 synonymous SNV . 0 24 hm5C_associated_SNPs_81698 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:104378568-104378609
64251 chr1 32793212 32793212 1 + G A COAD 32793209 + 32793189 32793229 41 GTGGAAGAGGCCTTCTACACCACGGACCGGGTCATGACTGT GTGGAAGAGGCCTTCTACACCACAGACCGGGTCATGACTGT < 41bp 0.739354333849642 0.519055183233647 0.022094488 0.005214095 prediction 0.44059830123199 Functional Loss - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32793209 chr1:32793212 synonymous SNV . 0 24 hm5C_associated_SNPs_81701 0 0 6 DDX24 POSTAR2 ENCODE chr1:32793164-32793216
64251 chr7 94917905 94917905 1 + G A LUSC 94917902 + 94917882 94917922 41 AGTGTCAGAATCGGGCCGTTCAGGAATGGAGTGTGCAGCAG AGTGTCAGAATCGGGCCGTTCAGAAATGGAGTGTGCAGCAG < 41bp 0.728822845002393 0.508528094606826 0.6655432 0.1974391 prediction 0.440589500791134 Functional Loss - PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94917902 chr7:94917905 nonsynonymous SNV 0.459 3 24 hm5C_associated_SNPs_81703 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:94917900-94917920
64251 chr1 214171309 214171309 1 + G A STAD 214171306 + 214171286 214171326 41 TCTGCCACCACGGGCTTCACCACGTCCACCTTCCGCCACCC TCTGCCACCACGGGCTTCACCACATCCACCTTCCGCCACCC < 41bp 0.720293065240683 0.48101161267742 0.39681602 0.16743454 prediction 0.440586130481367 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171306 chr1:214171309 synonymous SNV . 0 24 hm5C_associated_SNPs_81705 0 0 3 DDX6 POSTAR2 ENCODE chr1:214171281-214171394
64251 chr1 214171308 214171308 1 + C T UCEC 214171306 + 214171286 214171326 41 TCTGCCACCACGGGCTTCACCACGTCCACCTTCCGCCACCC TCTGCCACCACGGGCTTCACCATGTCCACCTTCCGCCACCC < 41bp 0.720293065240683 0.461259887911795 0.39681602 0.3293541 prediction 0.440586130481367 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171306 chr1:214171308 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_81706 0 0 3 DDX6 POSTAR2 ENCODE chr1:214171281-214171394
64251 chr19 2807713 2807713 1 + C T SKCM 2807711 + 2807691 2807731 41 GCCTTCCACCACGAGGAGGGCGCCAGTGCCTGGCATGAGGA GCCTTCCACCACGAGGAGGGCGTCAGTGCCTGGCATGAGGA < 41bp 0.834731424465439 0.614442661911617 0.89568126 0.8064752 prediction 0.440577525107642 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2807711 chr19:2807713 nonsynonymous SNV 0.145 0 23 hm5C_associated_SNPs_81709 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:2807710-2807737
64251 chr2 239353225 239353225 1 + A C BRCA 239353224 + 239353204 239353244 41 TCATGGATGCTGTTCTGCGCCACGGCTGTGAGGCAGCCTTC TCATGGATGCTGTTCTGCGCCCCGGCTGTGAGGCAGCCTTC < 41bp 0.818833169717191 0.598547279335321 0.09582901 0.053194344 prediction 0.44057178076374 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239353224 chr2:239353225 nonsynonymous SNV 0.831 3 22 hm5C_associated_SNPs_81711 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr2:239353206-239353241
64251 chr3 49744279 49744279 1 + T C UCEC 49744278 + 49744258 49744298 41 AGAAGGTTTTCTCAGAAAAGCTGGACCACCTGAGCCGCCGT AGAAGGTTTTCTCAGAAAAGCCGGACCACCTGAGCCGCCGT < 41bp 0.720280854082216 0.463050011974265 0.8722446 0.5508135 prediction 0.440561708164432 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49744278 chr3:49744279 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_81716 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:49744262-49744288
64251 chr5 68414415 68414415 1 + G A KIRC 68414412 + 68414392 68414432 41 TGTGTTTATGGAGTCAGTGGCTAGATTGATTGATCCTCCAG TGTGTTTATGGAGTCAGTGGCTAAATTGATTGATCCTCCAG < 41bp 0.740347596687761 0.520068749841812 0.24685007 0.09287739 prediction 0.440557693691899 Functional Loss - SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68414412 chr5:68414415 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_81719 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:68414379-68414423
64251 chr16 20856413 20856413 1 + C T rs140836762 20856410 + 20856390 20856430 41 GGCAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAAGGA GGCAGTGCCCAGCAGGCCCTCAATATTCTCACAGGCAAGGA < 41bp 0.73350991881638 0.513231328679631 0.2784375 0.41881496 prediction 0.440557180273496 Functional Loss - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20856410 chr16:20856413 synonymous SNV . 0 24 hm5C_associated_SNPs_81720 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:20856405-20856434
64251 chr11 8124040 8124040 1 + C T rs574498155 8124038 + 8124018 8124058 41 CCAGCACAACCCCCAGGAAACACAAATGGGGTCCAGGTCAC CCAGCACAACCCCCAGGAAACATAAATGGGGTCCAGGTCAC < 41bp 0.782714302026703 0.562436476737257 0.049823046 0.0558663 prediction 0.440555650578892 Functional Loss - TUB ENSG00000166402 UTR3 Human protein_coding chr11:8124038 chr11:8124040 . . 0 23 hm5C_associated_SNPs_81722 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:8124034-8124065
64251 chr19 12923928 12923928 1 + C T COAD 12923926 + 12923906 12923946 41 CAAAAGCGTGGTTGAAGGAGCACGTGGAGCCTGTGTTCGGC CAAAAGCGTGGTTGAAGGAGCATGTGGAGCCTGTGTTCGGC < 41bp 0.720269418017952 0.453088817559552 0.19057766 0.25990278 prediction 0.440538836035905 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12923926 chr19:12923928 synonymous SNV . 0 23 hm5C_associated_SNPs_81728 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr19:12923902-12923938
64251 chr16 28844513 28844513 1 + C T UCEC 28844511 + 28844491 28844531 41 CCCATGGGGTCTCCCGTCTCCTCCAAGACAGAGTCCGTATC CCCATGGGGTCTCCCGTCTCCTTCAAGACAGAGTCCGTATC < 41bp 0.720267486884398 0.412777269326314 0.9340211 0.01711902 prediction 0.440534973768796 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844511 chr16:28844513 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_81730 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:28844447-28844514
64251 chr3 52836433 52836433 1 + G T COAD 52836431 + 52836411 52836451 41 ACGCTATCCTGGACCTCACCCAGAACACTTACCAGCACTTC ACGCTATCCTGGACCTCACCCATAACACTTACCAGCACTTC < 41bp 0.720266155477439 0.355358756156548 0.7368021 0.13603246 prediction 0.440532310954877 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836431 chr3:52836433 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_81731 0 0 1 LIN28B POSTAR2 ENCODE chr3:52836394-52836436
64251 chr20 25229006 25229006 1 + C T BLCA 25229004 + 25228984 25229024 41 CGCACACGGTGCGCGACCACCTCGTGGGCCGCTGGATCCGC CGCACACGGTGCGCGACCACCTTGTGGGCCGCTGGATCCGC < 41bp 0.800540372872473 0.580274774218911 0.40068623 0.23516229 prediction 0.440531197307124 Functional Loss - PYGB ENSG00000100994 CDS Human protein_coding chr20:25229004 chr20:25229006 synonymous SNV . 0 23 hm5C_associated_SNPs_81732 0 0 1 DDX3X POSTAR2 ENCODE chr20:25228985-25229031
64251 chr12 49663280 49663280 1 + T C LUAD 49663279 + 49663259 49663299 41 CTCCATCCACGTTGGCCAGGCTGGTGTCCAGATTGGCAATG CTCCATCCACGTTGGCCAGGCCGGTGTCCAGATTGGCAATG < 41bp 0.72026281585687 0.478088115707126 0.35773724 0.4545565 prediction 0.44052563171374 Functional Loss - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49663279 chr12:49663280 synonymous SNV . 0 22 hm5C_associated_SNPs_81735 0 0 4 BUD13 POSTAR2 ENCODE chr12:49663208-49663281
64251 chr16 31234164 31234164 1 + G T PRAD 31234161 + 31234141 31234181 41 CCCCCAGGCTGCAGAAGATCCTGGCAGAGTCTCCCCCACCC CCCCCAGGCTGCAGAAGATCCTGTCAGAGTCTCCCCCACCC < 41bp 0.720261961818054 0.315288132534797 0.76639634 0.03814411 prediction 0.440523923636109 Functional Loss - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31234161 chr16:31234164 nonsynonymous SNV 0.979 0 24 hm5C_associated_SNPs_81736 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:31234158-31234195
64251 chr2 216198161 216198161 1 + G C PRAD 216198160 + 216198140 216198180 41 AACCCTCACACCCATCTCAGCGGCATATGCAAGAGCAAGAG AACCCTCACACCCATCTCAGCCGCATATGCAAGAGCAAGAG < 41bp 0.72025905797004 0.391191969150655 0.24919653 0.1895831 prediction 0.44051811594008 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216198160 chr2:216198161 synonymous SNV . 0 22 hm5C_associated_SNPs_81737 0 0 3 DDX24 POSTAR2 ENCODE chr2:216198125-216198176
64251 chr2 202149751 202149751 1 + C T BLCA 202149749 + 202149729 202149769 41 CCCCATCTATGAGCTGACATCTCAGTTCACTGGTTTGAAGT CCCCATCTATGAGCTGACATCTTAGTTCACTGGTTTGAAGT < 41bp 0.72025762950099 0.477379716745796 0.25586557 0.20225924 prediction 0.440515259001981 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202149749 chr2:202149751 stopgain 0.903 0 23 hm5C_associated_SNPs_81738 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:202149698-202149759
64251 chr8 9588487 9588487 1 + G A HNSC 9588484 + 9588464 9588504 41 ACTTCGCAGCAGGCTACAACCGCGTGTCTGTTGTAGAGTAC ACTTCGCAGCAGGCTACAACCGCATGTCTGTTGTAGAGTAC < 41bp 0.773003765617128 0.552749405530771 0.6931753 0.32726455 prediction 0.440508720172713 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9588484 chr8:9588487 nonsynonymous SNV 0.954 3 24 hm5C_associated_SNPs_81741 0 0 6 DDX24 POSTAR2 ENCODE chr8:9588399-9588491
64251 chr17 40724977 40724977 1 - G A rs149275413 40724979 - 40724959 40724999 41 TCCCAGACCCCTGAGGGGCCCACGGTCAGGACTGGTGGGGA TCCCAGACCCCTGAGGGGCCCATGGTCAGGACTGGTGGGGA < 41bp 0.793889237366722 0.573636132981312 0.24708536 0.22968322 prediction 0.440506208770821 Functional Loss - MLX;PSMC3IP ENSG00000108788;ENSG00000131470 UTR3 Human other chr17:40724979 chr17:40724977 . . 0 23 hm5C_associated_SNPs_81744 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:40724933-40724986
64251 chr11 71711546 71711546 1 + G T rs199903534 71711544 + 71711524 71711564 41 CTCCCAGCCCCCAGTGTTCCCAGCAGCTAAGCAGTGTCCAG CTCCCAGCCCCCAGTGTTCCCATCAGCTAAGCAGTGTCCAG < 41bp 0.913607874686733 0.693358764834651 0.53135437 0.19567636 prediction 0.440498219704164 Functional Loss - IL18BP ENSG00000137496 CDS Human protein_coding chr11:71711544 chr11:71711546 nonsynonymous SNV 0.010 0 23 hm5C_associated_SNPs_81747 0 0 3 EFTUD2 POSTAR2 ENCODE chr11:71711544-71711581
64251 chr19 8503612 8503612 1 + G A rs140893509 8503609 + 8503589 8503629 41 ATCCTGTGTGAAGATATTTTCAGGGTTTTTTTTTTTTTTTT ATCCTGTGTGAAGATATTTTCAGAGTTTTTTTTTTTTTTTT < 41bp 0.734882823180372 0.514638617916562 0.9171902 0.89965916 prediction 0.440488410527619 Functional Loss - MARCH2 ENSG00000099785 UTR3 Human protein_coding chr19:8503609 chr19:8503612 . . 0 24 hm5C_associated_SNPs_81752 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:8503600-8503620
64251 chr3 41275099 41275099 1 + G A GBM 41275096 + 41275076 41275116 41 AAATGTGGTCACCTGTGCAGCTGGAATTCTTTCTAACCTCA AAATGTGGTCACCTGTGCAGCTGAAATTCTTTCTAACCTCA < 41bp 0.720242340951297 0.490112217977579 0.071778744 0.057843 prediction 0.440484681902595 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275096 chr3:41275099 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81755 0 0 36 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:41275018-41275124
64251 chr3 149563870 149563870 1 + G A UCEC 149563867 + 149563847 149563887 41 GCCACACAAGTCTACACCATCTTGACTGTCCAGCTCTTTGC GCCACACAAGTCTACACCATCTTAACTGTCCAGCTCTTTGC < 41bp 0.758617929669852 0.538381150328501 0.08351624 0.037950426 prediction 0.440473558682703 Functional Loss - RNF13 ENSG00000082996 CDS Human protein_coding chr3:149563867 chr3:149563870 synonymous SNV . 0 24 hm5C_associated_SNPs_81761 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:149563847-149563885
64251 chr2 171571998 171571998 1 + A C rs115371253 171571994 + 171571974 171572014 41 CTCGGCGGCGGCGTCCCGCTCCGCAGCCAGGGGCCTGCAAG CTCGGCGGCGGCGTCCCGCTCCGCCGCCAGGGGCCTGCAAG < 41bp 0.839170913821304 0.618943735319632 0.29221544 0.25723928 prediction 0.440454357003344 Functional Loss - LOC101926913 ENSG00000204335 UTR5 Human protein_coding chr2:171571994 chr2:171571998 . . 0 25 hm5C_associated_SNPs_81766 0 0 2 DDX3X POSTAR2 ENCODE chr2:171571873-171572014
64251 chr17 59482937 59482937 1 + G A SKCM 59482934 + 59482914 59482954 41 TGGCCTTTTCCAGCCACTTGCACGGGCAGCAGTTCTTTGGG TGGCCTTTTCCAGCCACTTGCACAGGCAGCAGTTCTTTGGG < 41bp 0.807313457975552 0.587087629949076 0.9184588 0.7520516 prediction 0.440451656052952 Functional Loss - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59482934 chr17:59482937 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_81767 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:59482920-59482940
64251 chr14 24108146 24108146 1 + A C LUAD 24108145 + 24108125 24108165 41 AGGCTTTCTGTGAGGATGAGCAGCACCGGGATAGACAGGAA AGGCTTTCTGTGAGGATGAGCCGCACCGGGATAGACAGGAA < 41bp 0.81468471821729 0.59446728893259 0.33685833 0.17362398 prediction 0.440434858569398 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108145 chr14:24108146 nonsynonymous SNV 0.130 4 22 hm5C_associated_SNPs_81771 0 0 4 GRWD1 POSTAR2 ENCODE chr14:24108126-24108159
64251 chr18 19780720 19780720 1 + C T LUSC 19780718 + 19780698 19780738 41 GGCTCTACATAGGCGTCAGTCTCGCCTCGCCGGCCGAAGTC GGCTCTACATAGGCGTCAGTCTTGCCTCGCCGGCCGAAGTC < 41bp 0.720216627467385 0.44892957899861 0.2103579 0.09950355 prediction 0.440433254934771 Functional Loss - GATA6 ENSG00000141448 CDS Human protein_coding chr18:19780718 chr18:19780720 synonymous SNV . 0 23 hm5C_associated_SNPs_81773 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:19780714-19780733
64251 chr12 20522653 20522653 1 + G T LUAD 20522650 + 20522630 20522670 41 AGTCTCCTGTGTGCCTTCTTCTGGATGGGCTTGTACCTCCT AGTCTCCTGTGTGCCTTCTTCTGTATGGGCTTGTACCTCCT < 41bp 0.916318007854554 0.696114161370946 0.8969582 0.4129788 prediction 0.440407692967216 Functional Loss - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20522650 chr12:20522653 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_81780 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr12:20522620-20522660
64251 chr3 139062964 139062964 1 + G A COAD 139062961 + 139062941 139062981 41 TTCCGGGCTCGAATCCAGCCCTGGCACGGTGGCCTGCTCCA TTCCGGGCTCGAATCCAGCCCTGACACGGTGGCCTGCTCCA < 41bp 0.720200198333753 0.46438697622251 0.20613444 0.15965265 prediction 0.440400396667506 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062961 chr3:139062964 stopgain 0.002 0 24 hm5C_associated_SNPs_81785 0 0 6 FMR1 POSTAR2 ENCODE chr3:139062864-139062976
64251 chr17 17965227 17965227 1 + C T UCEC 17965224 + 17965204 17965244 41 GCTTCTTTTGCCGGGTTCTACTACATCTGCTTTCAGAAGTC GCTTCTTTTGCCGGGTTCTACTATATCTGCTTTCAGAAGTC < 41bp 0.752740968263235 0.532543308931576 0.6544475 0.0927124 prediction 0.440395318663318 Functional Loss - GID4 ENSG00000141034 CDS Human protein_coding chr17:17965224 chr17:17965227 synonymous SNV . 0 24 hm5C_associated_SNPs_81788 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:17965218-17965236
64251 chr9 133495806 133495806 1 + C T UCEC 133495804 + 133495784 133495824 41 AAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGA AAGCTGACTTTCGGGGTGTACGTGGCGATTTCAACTCTCGA < 41bp 0.720196513342754 0.436764891138354 0.8272009 0.29686916 prediction 0.440393026685508 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133495804 chr9:133495806 synonymous SNV . 0 23 hm5C_associated_SNPs_81789 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:133495786-133495811
64251 chr11 129321212 129321212 1 + G A rs34520023 129321209 + 129321189 129321229 41 TGAAGCACAGGAACCGAAAGCACGTGATGTCCCCTTAGAGA TGAAGCACAGGAACCGAAAGCACATGATGTCCCCTTAGAGA < 41bp 0.72018538843255 0.473846850959985 0.07678029 0.041808993 prediction 0.440370776865101 Functional Loss - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129321209 chr11:129321212 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_81797 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:129321200-129321226
64251 chr11 129321211 129321211 1 + C T UCEC 129321209 + 129321189 129321229 41 TGAAGCACAGGAACCGAAAGCACGTGATGTCCCCTTAGAGA TGAAGCACAGGAACCGAAAGCATGTGATGTCCCCTTAGAGA < 41bp 0.72018538843255 0.470718896983766 0.07678029 0.09594479 prediction 0.440370776865101 Functional Loss - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129321209 chr11:129321211 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_81798 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:129321200-129321226
64251 chr7 65705815 65705815 1 + G A UCEC 65705812 + 65705792 65705832 41 CTGGTGTTACTGATGAAGTGCTGGATTCTGCCATGCAAGCC CTGGTGTTACTGATGAAGTGCTGAATTCTGCCATGCAAGCC < 41bp 0.720178769266571 0.473996067865319 0.17419913 0.05791962 prediction 0.440357538533141 Functional Loss - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705812 chr7:65705815 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_81803 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:65705803-65705842
64251 chr5 141312891 141312891 1 + C T COAD 141312889 + 141312869 141312909 41 ACTTCCAGAAAGCTGCAGCCCGCGGCTACAGCAAAGCGCAG ACTTCCAGAAAGCTGCAGCCCGTGGCTACAGCAAAGCGCAG < 41bp 0.834340898890017 0.614164484652534 0.24138442 0.15419295 prediction 0.440352828474966 Functional Loss - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141312889 chr5:141312891 synonymous SNV . 0 23 hm5C_associated_SNPs_81804 0 0 3 PPIG POSTAR2 ENCODE chr5:141312870-141312903
64251 chr12 111085646 111085646 1 + A C BRCA 111085645 + 111085625 111085665 41 AGAGGCAGGCTTCAGAGCTCCACCAGCCATCAATGCCAGGC AGAGGCAGGCTTCAGAGCTCCCCCAGCCATCAATGCCAGGC < 41bp 0.764585454939901 0.544413953276284 0.30222422 0.1336354 prediction 0.440343003327234 Functional Loss - TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111085645 chr12:111085646 nonsynonymous SNV 0.117 0 22 hm5C_associated_SNPs_81805 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:111085628-111085661
64251 chr12 113822725 113822725 1 + G T LUAD 113822723 + 113822703 113822743 41 GTGGGCCCAGCCCCGGGAGCCGGGTGCTTACCATCCTGGAG GTGGGCCCAGCCCCGGGAGCCGTGTGCTTACCATCCTGGAG < 41bp 0.72016382179884 0.353937629808145 0.9334473 0.36969507 prediction 0.44032764359768 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113822723 chr12:113822725 synonymous SNV . 0 23 hm5C_associated_SNPs_81810 0 0 2 RPS3 POSTAR2 ENCODE chr12:113822692-113822727
64251 chr1 62910594 62910594 1 + G T CESC 62910592 + 62910572 62910612 41 GAGGAAATGAATGGTATTAACAGCATAGAGATGGACAGTAT GAGGAAATGAATGGTATTAACATCATAGAGATGGACAGTAT < 41bp 0.885850279077037 0.665687121508201 0.06727129 0.02838841 prediction 0.440326315137674 Functional Loss - USP1 ENSG00000162607 CDS Human protein_coding chr1:62910592 chr1:62910594 nonsynonymous SNV 0.687 1 23 hm5C_associated_SNPs_81811 0 0 32 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:62910566-62910604
64251 chr14 59113462 59113462 1 + G A STAD 59113459 + 59113439 59113479 41 GAGAATGTGGGGCTGTACCCCGCGCCTGTGCCTCTGCCCTA GAGAATGTGGGGCTGTACCCCGCACCTGTGCCTCTGCCCTA < 41bp 0.808430405794788 0.588267414133246 0.83334935 0.40135798 prediction 0.440325983323084 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113459 chr14:59113462 synonymous SNV . 0 24 hm5C_associated_SNPs_81812 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:59113453-59113505
64251 chr12 132271090 132271090 1 + G A UCEC 132271087 + 132271067 132271107 41 GGAGTGTGCCCACTGCCTACCGCGTGAGCCGCAGCCCTGGG GGAGTGTGCCCACTGCCTACCGCATGAGCCGCAGCCCTGGG < 41bp 0.720160718280716 0.475792577937869 0.65747225 0.3168382 prediction 0.440321436561431 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132271087 chr12:132271090 nonsynonymous SNV 0.944 0 24 hm5C_associated_SNPs_81814 0 0 3 BUD13 POSTAR2 ENCODE chr12:132271085-132271125
64251 chr6 4892338 4892338 1 + G A LUSC 4892335 + 4892315 4892355 41 GAACATGGACCTAGCGAAGTCAGGTATCAAGATCCTCGTGC GAACATGGACCTAGCGAAGTCAGATATCAAGATCCTCGTGC < 41bp 0.720160277899511 0.488373162152543 0.8272803 0.57699317 prediction 0.440320555799023 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892335 chr6:4892338 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_81815 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:4892318-4892342
64251 chr14 77844570 77844570 1 + G A SKCM 77844567 + 77844547 77844587 41 GGAATTTCTGGAGAAGGAACCAAGAAAGTCTAGTGAGGAGG GGAATTTCTGGAGAAGGAACCAAAAAAGTCTAGTGAGGAGG < 41bp 0.760357481474618 0.540202857938005 0.43477976 0.25281245 prediction 0.440309247073226 Functional Loss - SAMD15 ENSG00000100583 CDS Human protein_coding chr14:77844567 chr14:77844570 nonsynonymous SNV 0.022 0 24 hm5C_associated_SNPs_81819 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:77844536-77844574
64251 chr17 7466676 7466676 1 + G T SARC 7466674 + 7466654 7466694 41 AGATGAAGAGGAGGAAGTGGCAGCTTGGAGGCTGCCCCCAA AGATGAAGAGGAGGAAGTGGCATCTTGGAGGCTGCCCCCAA < 41bp 0.720153918325428 0.372331723856893 0.86155355 0.4024781 prediction 0.440307836650855 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466674 chr17:7466676 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_81821 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:7466660-7466680
64251 chr1 47904524 47904524 1 + G A rs200715115 47904521 + 47904501 47904541 41 CACCCACACCCGCACCCTCACCCGGAGCTGCTGCTGCGTGG CACCCACACCCGCACCCTCACCCAGAGCTGCTGCTGCGTGG < 41bp 0.788504931789085 0.568356853760815 0.089431465 0.060105383 prediction 0.440296156056541 Functional Loss - FOXD2 ENSG00000186564 CDS Human protein_coding chr1:47904521 chr1:47904524 synonymous SNV . 0 24 hm5C_associated_SNPs_81825 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:47904512-47904540
64251 chr9 116045682 116045682 1 + T C SKCM 116045681 + 116045661 116045701 41 TGTCGCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCA TGTCGCAGGGCAATGAAACGCCTGGAAGAGGCCCGACTCCA < 41bp 0.720147831857823 0.473082219997746 0.21178791 0.3372791 prediction 0.440295663715646 Functional Loss - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116045681 chr9:116045682 synonymous SNV . 0 22 hm5C_associated_SNPs_81827 0 0 1 BUD13 POSTAR2 ENCODE chr9:116045633-116045712
64251 chr19 50099458 50099458 1 + G A STAD 50099455 + 50099435 50099475 41 TACAAGGGCAAGGGGGATGGCTCGGAGCTGCTGGCGGGCCC TACAAGGGCAAGGGGGATGGCTCAGAGCTGCTGGCGGGCCC < 41bp 0.780361115304086 0.560216466369056 0.8731394 0.8581656 prediction 0.440289297870061 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099455 chr19:50099458 synonymous SNV . 0 24 hm5C_associated_SNPs_81828 0 0 10 BUD13 POSTAR2 ENCODE chr19:50099446-50099485
64251 chr1 161183230 161183230 1 + C T LUAD 161183228 + 161183208 161183248 41 TACTGAGGGCTACCAAGTTCCTCCAGGAGCCACATATACTG TACTGAGGGCTACCAAGTTCCTTCAGGAGCCACATATACTG < 41bp 0.879036973119972 0.658893593835352 0.954571 0.026136458 prediction 0.440286758569242 Functional Loss - NDUFS2 ENSG00000158864 CDS Human protein_coding chr1:161183228 chr1:161183230 nonsynonymous SNV 0.953 2 23 hm5C_associated_SNPs_81829 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr1:161183200-161183240
64251 chr6 26377216 26377216 1 + G A rs139636053 26377213 + 26377193 26377233 41 CATATCTCGTTCTACAATGCCACGGATGGATCTCATATCTA CATATCTCGTTCTACAATGCCACAGATGGATCTCATATCTA < 41bp 0.728446774827584 0.508304261713904 0.06794986 0.03714457 prediction 0.440285026227359 Functional Loss - BTN3A2 ENSG00000186470 UTR3 Human protein_coding chr6:26377213 chr6:26377216 . . 0 24 hm5C_associated_SNPs_81830 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:26377191-26377224
64251 chr12 50479963 50479963 1 + G A UCEC 50479960 + 50479940 50479980 41 GTAGAGACCAGGTATGTTGCCAGGCAGCCGAATGACACCTC GTAGAGACCAGGTATGTTGCCAGACAGCCGAATGACACCTC < 41bp 0.764288568114604 0.544154686581959 0.49492404 0.36551625 prediction 0.440267763065291 Functional Loss - SMARCD1 ENSG00000066117 CDS Human protein_coding chr12:50479960 chr12:50479963 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_81839 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:50479951-50479969
64251 chr19 30935280 30935280 1 + G C HNSC 30935276 + 30935256 30935296 41 GTGCAGGAGGACGCGGTGGCCCCGGCGGCGGGCTTCCGCTG GTGCAGGAGGACGCGGTGGCCCCGCCGGCGGGCTTCCGCTG < 41bp 0.868826207748079 0.648694570732121 0.90309167 0.36851084 prediction 0.440263274031915 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935276 chr19:30935280 nonsynonymous SNV 0.109 3 25 hm5C_associated_SNPs_81840 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:30935280-30935300
64251 chr3 49008082 49008082 1 + G A HNSC 49008079 + 49008059 49008099 41 CAGACTGCCCCATGGTTATTCGGGTACAGGAGCCTAGAGCT CAGACTGCCCCATGGTTATTCGGATACAGGAGCCTAGAGCT < 41bp 0.800937212360171 0.580820747789356 0.8954313 0.8591617 prediction 0.440232929141631 Functional Loss - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49008079 chr3:49008082 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_81845 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49008061-49008085
64251 chr10 74034069 74034069 1 + C T BLCA 74034067 + 74034047 74034087 41 ACCCCAGATCGGCCGCCGCGCTCAGCCTGGGGGTCGGCGAC ACCCCAGATCGGCCGCCGCGCTTAGCCTGGGGGTCGGCGAC < 41bp 0.720116303951989 0.463220859849621 0.37069127 0.32368016 prediction 0.440232607903978 Functional Loss - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034067 chr10:74034069 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_81846 0 0 6 DDX3X POSTAR2 ENCODE chr10:74034062-74034150
64251 chr14 100745048 100745048 1 + A C rs562554822 100745047 + 100745027 100745067 41 CCCGAGTTCAGGAACTACCTCAGAACACCCCAGGCCAGGTT CCCGAGTTCAGGAACTACCTCCGAACACCCCAGGCCAGGTT < 41bp 0.801991015096848 0.581875506924949 0.44372523 0.40369934 prediction 0.440231016343798 Functional Loss - YY1 ENSG00000100811 UTR3 Human protein_coding chr14:100745047 chr14:100745048 . . 0 22 hm5C_associated_SNPs_81848 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr14:100744970-100745065
64251 chr1 29069847 29069847 1 + G T UCEC 29069845 + 29069825 29069865 41 CAACCCGCTGGGTAGCACCTCGGAACCGTGGCAGTGGGTTC CAACCCGCTGGGTAGCACCTCGTAACCGTGGCAGTGGGTTC < 41bp 0.720113673988523 0.375382605258459 0.33965242 0.0926975 prediction 0.440227347977045 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069845 chr1:29069847 synonymous SNV . 0 23 hm5C_associated_SNPs_81850 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:29069818-29069893
64251 chr2 191236072 191236072 1 + G T UCEC 191236069 + 191236049 191236089 41 CATACAGATCCAGGAAGCGGCTGGAGACATTCCTGAGCCTC CATACAGATCCAGGAAGCGGCTGTAGACATTCCTGAGCCTC < 41bp 0.926072832251525 0.705961185804019 0.72394574 0.32105178 prediction 0.440223292895011 Functional Loss - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191236069 chr2:191236072 stopgain 0.089 0 24 hm5C_associated_SNPs_81852 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:191236060-191236080
64251 chr1 909731 909731 1 + G A UCEC 909728 + 909708 909748 41 AGGGAAGGTTCGCCCGAACCCTGGCTGCCTCTGACAGGTGA AGGGAAGGTTCGCCCGAACCCTGACTGCCTCTGACAGGTGA < 41bp 0.720111394685757 0.47753854624521 0.29453146 0.10845032 prediction 0.440222789371514 Functional Loss - PLEKHN1 ENSG00000187583 CDS Human protein_coding chr1:909728 chr1:909731 stopgain 0.000 0 24 hm5C_associated_SNPs_81853 0 0 1 PRPF8 POSTAR2 ENCODE chr1:909721-909809
64251 chr8 11142448 11142448 1 + G T UCEC 11142446 + 11142426 11142466 41 CGCGGGTGGACAATGTGGTGCTGCACCGGCCTTTCTACCCG CGCGGGTGGACAATGTGGTGCTTCACCGGCCTTTCTACCCG < 41bp 0.720105701229666 0.401822603815511 0.24717605 0.16658217 prediction 0.440211402459332 Functional Loss - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11142446 chr8:11142448 synonymous SNV . 0 23 hm5C_associated_SNPs_81857 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:11142448-11142470
64251 chr10 51579211 51579211 1 + C T COAD 51579209 + 51579189 51579229 41 CCTTTTGAGGTGTAGTGATGCACGGAGGGACTTGGAGCTTG CCTTTTGAGGTGTAGTGATGCATGGAGGGACTTGGAGCTTG < 41bp 0.840293344793723 0.620190387373035 0.3574174 0.74668586 prediction 0.440205914841376 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51579209 chr10:51579211 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_81863 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:51579180-51579218
64251 chr17 73702537 73702537 1 + C T LUSC 73702535 + 73702515 73702555 41 GTTGTCACGGTCACCACCAGCGCCAGCGGCTCCAAGACCAC GTTGTCACGGTCACCACCAGCGTCAGCGGCTCCAAGACCAC < 41bp 0.837244841716858 0.617143989006774 0.46433118 0.25383496 prediction 0.440201705420169 Functional Loss - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73702535 chr17:73702537 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_81864 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:73702520-73702540
64251 chr6 3118998 3118998 1 + G T rs2231357 3118995 + 3118975 3119015 41 ATGGTGGCTGTGCTGGGCGGCCGGGGCGTGTTGCGCCTGCG ATGGTGGCTGTGCTGGGCGGCCGTGGCGTGTTGCGCCTGCG < 41bp 0.72009099112914 0.328527583114808 0.9139805 0.4586419 prediction 0.44018198225828 Functional Loss - BPHL ENSG00000137274 CDS Human protein_coding chr6:3118995 chr6:3118998 synonymous SNV . 0 24 hm5C_associated_SNPs_81868 0 0 2 DDX3X POSTAR2 ENCODE chr6:3118973-3119026
64251 chr16 2127662 2127662 1 + G A SKCM 2127659 + 2127639 2127679 41 TCTCCACCCGTGAAAGAATTCAAGGAGAGCTCTGCAGCCGA TCTCCACCCGTGAAAGAATTCAAAGAGAGCTCTGCAGCCGA < 41bp 0.738700962540946 0.518616287365082 0.33321032 0.08391294 prediction 0.440169350351728 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2127659 chr16:2127662 synonymous SNV . 0 24 hm5C_associated_SNPs_81871 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:2127612-2127698
64251 chr1 31194489 31194489 1 + G A rs150728572 31194486 + 31194466 31194506 41 TTGGGCCCCACGTCCAGCGACTCGATGACCTGGGACAGGAA TTGGGCCCCACGTCCAGCGACTCAATGACCTGGGACAGGAA < 41bp 0.774189235823907 0.554106062369579 0.260809 0.59098 prediction 0.440166346908655 Functional Loss - MATN1 ENSG00000162510 CDS Human protein_coding chr1:31194486 chr1:31194489 synonymous SNV . 0 24 hm5C_associated_SNPs_81874 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:31194439-31194492
64251 chr6 54805146 54805146 1 + G T OV 54805143 + 54805123 54805163 41 AAAACAACAAATCTTGCAGACAGGAATTCAAATGTTCGGAG AAAACAACAAATCTTGCAGACAGTAATTCAAATGTTCGGAG < 41bp 0.720083052314931 0.339047475390461 0.80088985 0.38002992 prediction 0.440166104629862 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54805143 chr6:54805146 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_81875 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:54805146-54805174
64251 chr10 115481474 115481474 1 + G T THCA 115481472 + 115481452 115481492 41 TCTTCAAGTGCTTCCGAAGCCTGGGTTTTGACGTGATTGTC TCTTCAAGTGCTTCCGAAGCCTTGGTTTTGACGTGATTGTC < 41bp 0.903412644835577 0.683331077361278 0.24794394 0.045907497 prediction 0.440163134948598 Functional Loss - CASP7 ENSG00000165806 CDS Human protein_coding chr10:115481472 chr10:115481474 synonymous SNV . 0 23 hm5C_associated_SNPs_81876 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:115481467-115481486
64251 chr22 30405084 30405084 1 + C T UCEC 30405081 + 30405061 30405101 41 TTCGGAGGAGTTTTCAGTCTCTGCGGTTGCTGTGCACTCAG TTCGGAGGAGTTTTCAGTCTCTGTGGTTGCTGTGCACTCAG < 41bp 0.720077081348093 0.499275009856597 0.78801477 0.5343278 prediction 0.440154162696187 Functional Loss - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30405081 chr22:30405084 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_81878 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr22:30405045-30405100
64251 chr12 42836501 42836501 1 + C T THCA 42836499 + 42836479 42836519 41 TGAGGAACACTGAAATGGATCACGACGGAACCCCCGAAAAC TGAGGAACACTGAAATGGATCATGACGGAACCCCCGAAAAC < 41bp 0.81480338232144 0.594729350421397 0.22753811 0.33176753 prediction 0.440148063800086 Functional Loss - PPHLN1 ENSG00000134283 CDS Human protein_coding chr12:42836499 chr12:42836501 synonymous SNV . 0 23 hm5C_associated_SNPs_81879 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:42836475-42836511
64251 chr5 126189117 126189117 1 + G T rs62392872 126189114 + 126189094 126189134 41 GAGGGCAAGAGCGTTATTTTCTGGGTCAGAATAACCTTTTA GAGGGCAAGAGCGTTATTTTCTGTGTCAGAATAACCTTTTA < 41bp 0.720071941576036 0.382776365512243 0.7981337 0.12801057 prediction 0.440143883152072 Functional Loss - LMNB1;MARCH3 ENSG00000113368;ENSG00000173926 intergenic Human other chr5:126189114 chr5:126189117 . . 0 24 hm5C_associated_SNPs_81881 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:126189100-126189120
64251 chr10 12198955 12198955 1 + C T SKCM 12198952 + 12198932 12198972 41 GCTCTGTTCCATTTGTTGGCCACCAGGACGGACAAAGTCCG GCTCTGTTCCATTTGTTGGCCACTAGGACGGACAAAGTCCG < 41bp 0.720070624290102 0.488808073858865 0.052672744 0.10453531 prediction 0.440141248580203 Functional Loss - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12198952 chr10:12198955 synonymous SNV . 0 24 hm5C_associated_SNPs_81883 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:12198913-12198955
64251 chr3 9804607 9804607 1 - C T SKCM 9804610 - 9804590 9804630 41 CATGACCTGGGCATTGTACACCGGGATCTCAAGGTGGGGCT CATGACCTGGGCATTGTACACCGAGATCTCAAGGTGGGGCT < 41bp 0.794859857414393 0.574789685876167 0.9011163 0.24302989 prediction 0.440140343076452 Functional Loss - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9804610 chr3:9804607 synonymous SNV . 0 24 hm5C_associated_SNPs_81884 0 0 1 PRPF8 POSTAR2 ENCODE chr3:9804560-9804634
64251 chr3 10191497 10191497 1 + C T KIRC 10191494 + 10191474 10191514 41 ATACTCTGAAAGAGCGATGCCTCCAGGTTGTCCGGAGCCTA ATACTCTGAAAGAGCGATGCCTCTAGGTTGTCCGGAGCCTA < 41bp 0.76770378056026 0.547641371802504 0.9409847 0.58577806 prediction 0.440124817515512 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191494 chr3:10191497 stopgain 1.000 1 24 hm5C_associated_SNPs_81887 2 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr14 65007753 65007753 1 + G T UCEC 65007750 + 65007730 65007770 41 GCCGCCAAGAACCAGGTGGCCATGAACCCCACCAACACCAT GCCGCCAAGAACCAGGTGGCCATTAACCCCACCAACACCAT < 41bp 0.720060417656797 0.325932797383142 0.18016586 0.39584965 prediction 0.440120835313594 Functional Loss - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65007750 chr14:65007753 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_81890 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:65007753-65007754
64251 chr19 47856509 47856509 1 + G A BLCA 47856506 + 47856486 47856526 41 CTGCAGAGATTCCAGAATCTCAAGACCTCCAGGAAGGAGGA CTGCAGAGATTCCAGAATCTCAAAACCTCCAGGAAGGAGGA < 41bp 0.720053307059041 0.469705024252037 0.2313194 0.22971576 prediction 0.440106614118082 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856506 chr19:47856509 synonymous SNV . 0 24 hm5C_associated_SNPs_81894 0 0 1 RBM15 POSTAR2 ENCODE chr19:47856462-47856527
64251 chr8 124810464 124810464 1 + A T LUAD 124810460 + 124810440 124810480 41 ACCAATGAAATCCGGCCTGTCAGCAGCTGCACCCCTCAGGT ACCAATGAAATCCGGCCTGTCAGCTGCTGCACCCCTCAGGT < 41bp 0.894502747968696 0.674453220096184 0.29158798 0.32041514 prediction 0.440099055745024 Functional Loss - FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124810460 chr8:124810464 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_81897 0 0 2 PRPF8 POSTAR2 ENCODE chr8:124810439-124810495
64251 chr21 30715068 30715068 1 + G A STAD 30715065 + 30715045 30715085 41 TGTCCACAGCCACCTCTGAGCAAGCTGGGCCTGCGGAACAG TGTCCACAGCCACCTCTGAGCAAACTGGGCCTGCGGAACAG < 41bp 0.720047862618718 0.478696096451901 0.52807856 0.4231068 prediction 0.440095725237436 Functional Loss - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715065 chr21:30715068 nonsynonymous SNV 0.298 0 24 hm5C_associated_SNPs_81898 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr4 184367501 184367501 1 + G A UCEC 184367498 + 184367478 184367518 41 GCAGCAGCAGCGTTTCCTCTCAGGTAACAACGGCAGGATCT GCAGCAGCAGCGTTTCCTCTCAGATAACAACGGCAGGATCT < 41bp 0.753461537318257 0.533415289246096 0.8838011 0.6870569 prediction 0.440092496144323 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367498 chr4:184367501 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_81900 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:184367490-184367519
64251 chr12 121435468 121435468 1 + G A HNSC 121435465 + 121435445 121435485 41 TGGCTCAGCTGCAGAGCCCCCACGGTGAGCGCCCTGTGCCC TGGCTCAGCTGCAGAGCCCCCACAGTGAGCGCCCTGTGCCC < 41bp 0.806282326744261 0.586241181442757 0.5076823 0.17251682 prediction 0.440082290603008 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121435465 chr12:121435468 nonsynonymous SNV 0.810 3 24 hm5C_associated_SNPs_81904 0 0 2 PRPF8 POSTAR2 ENCODE chr12:121435445-121435505
64251 chr1 26146512 26146512 1 + G A rs2294225 26146509 + 26146489 26146529 41 GAGGTGAGAGAGTCCGGGAGCCCGAGCTTGAGGTGAGAAAG GAGGTGAGAGAGTCCGGGAGCCCAAGCTTGAGGTGAGAAAG < 41bp 0.753545596889619 0.533506448555783 0.2617401 0.33154225 prediction 0.440078296667672 Functional Loss - LOC646471 ENSG00000117640;ENSG00000223474 UTR5;UTR3 Human other chr1:26146509 chr1:26146512 . . 0 24 hm5C_associated_SNPs_81907 0 0 5 DDX3X POSTAR2 ENCODE chr1:26146467-26146549
64251 chr2 131103949 131103949 1 + A C UCEC 131103948 + 131103928 131103968 41 GTGTACATGATCCGTCTGGGCACGCTGGAGCAGGAGGCCAC GTGTACATGATCCGTCTGGGCCCGCTGGAGCAGGAGGCCAC < 41bp 0.795180009965653 0.575141123631336 0.15201798 0.11192119 prediction 0.440077772668633 Functional Loss - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103948 chr2:131103949 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_81908 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:131103931-131103954
64251 chr1 110172520 110172520 1 + C T COAD 110172518 + 110172498 110172538 41 TGCTGGCTGAGAACATTTCCCACGGGCTCCTTCTGCGCAAG TGCTGGCTGAGAACATTTCCCATGGGCTCCTTCTGCGCAAG < 41bp 0.802768505689242 0.582731357454867 0.41186017 0.25278246 prediction 0.440074296468749 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110172518 chr1:110172520 synonymous SNV . 0 23 hm5C_associated_SNPs_81910 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:110172497-110172531
64251 chr10 104182636 104182636 1 + G A CESC 104182633 + 104182613 104182653 41 CACCATGTGGCGGAGTCCAGCCTGAGCCGCTTGCGGAAGCG CACCATGTGGCGGAGTCCAGCCTAAGCCGCTTGCGGAAGCG < 41bp 0.720037145212263 0.482667626342512 0.13238105 0.09488276 prediction 0.440074290424526 Functional Loss - FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104182633 chr10:104182636 synonymous SNV . 0 24 hm5C_associated_SNPs_81911 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104182563-104182636
64251 chr2 3391432 3391432 1 + C T UCEC 3391430 + 3391410 3391450 41 GGCGGCGAGGAGACCCCGGCCCCGGAGGCCCCGCACCCCCC GGCGGCGAGGAGACCCCGGCCCTGGAGGCCCCGCACCCCCC < 41bp 0.72003230461574 0.480728316093354 0.4316328 0.21679983 prediction 0.44006460923148 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3391430 chr2:3391432 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_81914 0 0 3 BUD13 POSTAR2 ENCODE chr2:3391384-3391485
64251 chr1 13910316 13910316 1 + G A COAD 13910313 + 13910293 13910333 41 AGAGATAAATGCTGACTCCGCTCGGAAAGTTCTCAACTGCA AGAGATAAATGCTGACTCCGCTCAGAAAGTTCTCAACTGCA < 41bp 0.785442125574396 0.565411748965854 0.14245701 0.053266555 prediction 0.440060753217084 Functional Loss - PDPN ENSG00000162493 CDS Human protein_coding chr1:13910313 chr1:13910316 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_81920 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:13910306-13910331
64251 chr11 75277634 75277634 1 + C T LUAD 75277632 + 75277612 75277652 41 TGGTGGCCTCGTCGCTAGGGCTCGTGTCGCTGGGCGGCAAG TGGTGGCCTCGTCGCTAGGGCTTGTGTCGCTGGGCGGCAAG < 41bp 0.720030165283722 0.447439919300152 0.14025545 0.13870943 prediction 0.440060330567443 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277632 chr11:75277634 synonymous SNV . 0 23 hm5C_associated_SNPs_81922 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:75277589-75277645
64251 chr15 58855824 58855824 1 + G T HNSC 58855821 + 58855801 58855841 41 AGTGCAGTGTGGGCCAATGTCTGGGACACGGTCCAGACCAT AGTGCAGTGTGGGCCAATGTCTGTGACACGGTCCAGACCAT < 41bp 0.936311193846587 0.716282948817565 0.86979795 0.29995608 prediction 0.440056490058045 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58855821 chr15:58855824 nonsynonymous SNV 0.845 4 24 hm5C_associated_SNPs_81925 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr15:58855820-58855840
64251 chr17 7605165 7605165 1 + G A rs139650717 7605162 + 7605142 7605182 41 GAAGGGCACTGCCACCTGCACAGGGGCCTTTTGTGAGCCGG GAAGGGCACTGCCACCTGCACAGAGGCCTTTTGTGAGCCGG < 41bp 0.759397010078207 0.539372714382821 0.91176426 0.48240352 prediction 0.440048591390772 Functional Loss - WRAP53 ENSG00000141499 intronic Human protein_coding chr17:7605162 chr17:7605165 . . 0 24 hm5C_associated_SNPs_81930 0 0 2 EFTUD2 POSTAR2 ENCODE chr17:7605135-7605187
64251 chr6 157963706 157963706 1 + C T UCEC 157963704 + 157963684 157963724 41 GTGATGGGGACCCTGCTCCGCACCAGCTTCAGCGACCCCGG GTGATGGGGACCCTGCTCCGCATCAGCTTCAGCGACCCCGG < 41bp 0.851088426737259 0.631065364805458 0.08821282 0.038954765 prediction 0.440046123863602 Functional Loss - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:157963704 chr6:157963706 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_81931 0 0 3 DDX3X POSTAR2 ENCODE chr6:157963685-157963757
64251 chr1 227921164 227921164 1 - C T SKCM 227921167 - 227921147 227921187 41 CTTGGAGATCACGCAGGAAGCGGGCGAGATGGTGTTTGTGC CTTGGAGATCACGCAGGAAGCGGACGAGATGGTGTTTGTGC < 41bp 0.782346928788041 0.562327287721982 0.8781955 0.3968026 prediction 0.440039282132117 Functional Loss - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227921167 chr1:227921164 nonsynonymous SNV 0.988 5 24 hm5C_associated_SNPs_81934 0 0 2 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr1:227921164-227921165
64251 chr19 13059913 13059913 1 + G A STAD 13059910 + 13059890 13059930 41 GACAGGGAATTCCTGGGAGCCCCGAGCCGGAACACGGTTCT GACAGGGAATTCCTGGGAGCCCCAAGCCGGAACACGGTTCT < 41bp 0.776821132179272 0.556802982674916 0.15286595 0.080964655 prediction 0.440036299008713 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059910 chr19:13059913 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_81935 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13059896-13059918
64251 chr12 54448914 54448914 1 + G A PAAD 54448911 + 54448891 54448931 41 AGCACCCTTTCGGCAGCTACCCCGGGTACTTCTGAAGACCA AGCACCCTTTCGGCAGCTACCCCAGGTACTTCTGAAGACCA < 41bp 0.748929148867698 0.528913950541414 0.82951534 0.8163203 prediction 0.440030396652568 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448911 chr12:54448914 synonymous SNV . 0 24 hm5C_associated_SNPs_81937 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:54448885-54448925
64251 chr16 1750786 1750786 1 + G T rs117987683 1750783 + 1750763 1750803 41 TTTTTATTGAGAAAATGATTCACGAATTCCAAATCAGATTG TTTTTATTGAGAAAATGATTCACTAATTCCAAATCAGATTG < 41bp 0.720012447028104 0.375754457145496 0.073296666 0.09655106 prediction 0.440024894056207 Functional Loss - JPT2 ENSG00000206053 UTR3 Human protein_coding chr16:1750783 chr16:1750786 . . 0 24 hm5C_associated_SNPs_81940 0 0 29 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:1750674-1750823
64251 chr2 241513198 241513198 1 + C T UCEC 241513196 + 241513176 241513216 41 TCTCTGCATGCACCAGGAGCCGCGTGTGGGCCGAGCCATGC TCTCTGCATGCACCAGGAGCCGTGTGTGGGCCGAGCCATGC < 41bp 0.790527383019795 0.57051925662761 0.4141912 0.33074313 prediction 0.44001625278437 Functional Loss - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241513196 chr2:241513198 synonymous SNV . 0 23 hm5C_associated_SNPs_81942 0 0 5 EFTUD2 POSTAR2 ENCODE chr2:241513118-241513231
64251 chr7 135347333 135347333 1 + C T READ 135347331 + 135347311 135347351 41 CCCTCCCCACCGACATCATGCTCCAGTTCCTGGTGAGTGGA CCCTCCCCACCGACATCATGCTTCAGTTCCTGGTGAGTGGA < 41bp 0.803291316555495 0.583285482855387 0.31917122 0.089933336 prediction 0.440011667400217 Functional Loss - C7orf73 ENSG00000243317 CDS Human protein_coding chr7:135347331 chr7:135347333 synonymous SNV . 0 23 hm5C_associated_SNPs_81943 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135347290-135347342
64251 chr1 2335326 2335326 1 + C T rs113686958 2335324 + 2335304 2335344 41 CTGGCTTTGTAGGTTCAGCACTCGGCCCCCCACTGCGGGAG CTGGCTTTGTAGGTTCAGCACTTGGCCCCCCACTGCGGGAG < 41bp 0.769762541216999 0.54975702283389 0.15579566 0.16660723 prediction 0.440011036766217 Functional Loss - RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2335324 chr1:2335326 . . 0 23 hm5C_associated_SNPs_81944 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:2335302-2335332
64251 chr2 135922183 135922183 1 + G A COAD 135922180 + 135922160 135922200 41 CTAGGTTTGTGAGTTGCCTGCTGGAGCAGCCTGAAGTGTTA CTAGGTTTGTGAGTTGCCTGCTGAAGCAGCCTGAAGTGTTA < 41bp 0.769768686830159 0.54977212660862 0.371603 0.24734622 prediction 0.439993120443077 Functional Loss - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135922180 chr2:135922183 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_81949 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:135922164-135922192
64251 chr14 59789696 59789696 1 + G A UCEC 59789693 + 59789673 59789713 41 GGACTACGAGACCTCAGAGTCTCGAATACATACTTCTCTCA GGACTACGAGACCTCAGAGTCTCAAATACATACTTCTCTCA < 41bp 0.731041934430189 0.511045683555108 0.5797049 0.38841084 prediction 0.439992501750161 Functional Loss - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59789693 chr14:59789696 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_81950 0 0 5 BUD13 POSTAR2 ENCODE chr14:59789599-59789703
64251 chr3 129218838 129218838 1 + G C COAD 129218834 + 129218814 129218854 41 AATATCAAGGAGCCCAAAGCCGCCGTGGAGATGTACATCTC AATATCAAGGAGCCCAAAGCCGCCCTGGAGATGTACATCTC < 41bp 0.842184496620394 0.622188713926055 0.22062436 0.10438681 prediction 0.439991565388676 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129218834 chr3:129218838 nonsynonymous SNV 0.931 2 25 hm5C_associated_SNPs_81951 0 0 1 YBX3 POSTAR2 ENCODE chr3:129218805-129218863
64251 chr19 39961144 39961144 1 + T C UCEC 39961143 + 39961123 39961163 41 CTGTGGGTGTCATCGTGCGACTAGAACGGGAGACCTTCCAG CTGTGGGTGTCATCGTGCGACCAGAACGGGAGACCTTCCAG < 41bp 0.817427616005625 0.59743301441947 0.06866333 0.109638184 prediction 0.439989203172309 Functional Loss - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39961143 chr19:39961144 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_81952 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:39961121-39961146
64251 chr16 53476733 53476733 1 + G A COAD 53476730 + 53476710 53476750 41 AGGACATCTTTAAATACCCTCAAGAGGAGCAACCTCGTCAG AGGACATCTTTAAATACCCTCAAAAGGAGCAACCTCGTCAG < 41bp 0.71999264756288 0.480715422514686 0.37848622 0.22162905 prediction 0.439985295125759 Functional Loss - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53476730 chr16:53476733 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_81954 0 0 2 FBL POSTAR2 GSE43666,GSM1067864 chr16:53476697-53476735
64251 chr17 73518328 73518328 1 + A C rs77247739 73518327 + 73518307 73518347 41 AGGAGCTGCTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGC AGGAGCTGCTGCAGCGGCGGCCGGTGCAGAGGAGCCAGCGC < 41bp 0.809736739892591 0.589753701199027 0.9117723 0.89641345 prediction 0.439966077387127 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73518327 chr17:73518328 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_81961 2 0 1 BUD13 POSTAR2 ENCODE chr17:73518292-73518416
64251 chr2 174229618 174229618 1 + G A UCEC 174229615 + 174229595 174229635 41 CCTCTTACCAGGTCAAGGTCCCGGATCCTCGGGTCCCTTGA CCTCTTACCAGGTCAAGGTCCCGAATCCTCGGGTCCCTTGA < 41bp 0.793874194404963 0.573892009304712 0.9051591 0.31611276 prediction 0.439964370200502 Functional Loss - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174229615 chr2:174229618 synonymous SNV . 0 24 hm5C_associated_SNPs_81963 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:174229576-174229620
64251 chr1 154961316 154961316 1 + G A UCEC 154961313 + 154961293 154961333 41 CCAGTGAGGCTGTATACAAACTCGCTGAATCAGGTAGGGAC CCAGTGAGGCTGTATACAAACTCACTGAATCAGGTAGGGAC < 41bp 0.785085960934378 0.565106560027977 0.08895621 0.053611994 prediction 0.439958801812803 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154961313 chr1:154961316 nonsynonymous SNV 0.902 0 24 hm5C_associated_SNPs_81968 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:154961292-154961316
64251 chr19 53929947 53929947 1 + G A rs540340374 53929944 + 53929924 53929964 41 CCTACTGTGAACTGTGCATGCGAGGGATCTGGGTTGCATGC CCTACTGTGAACTGTGCATGCGAAGGATCTGGGTTGCATGC < 41bp 0.724736809185542 0.504766079167747 0.9206427 0.3976364 prediction 0.43994146003559 Functional Loss - ZNF765-ZNF761 ENSG00000196417 UTR3 Human protein_coding chr19:53929944 chr19:53929947 . . 0 24 hm5C_associated_SNPs_81972 0 0 1 RBFOX2 POSTAR2 ENCODE chr19:53929930-53929982
64251 chr1 179063290 179063290 1 + G A COAD 179063287 + 179063267 179063307 41 GTTGCTCAAGGCTGGATGGTCCCGGGAAGAAATTACGATGG GTTGCTCAAGGCTGGATGGTCCCAGGAAGAAATTACGATGG < 41bp 0.790186883585944 0.570216803109383 0.43342146 0.14947075 prediction 0.439940160953121 Functional Loss - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179063287 chr1:179063290 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_81973 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:179063270-179063290
64251 chr17 40714724 40714724 1 + G A SARC 40714721 + 40714701 40714741 41 CGCCTGGCCTCCATCCTGACCTCGGCGGCCCGGCTGGTGAA CGCCTGGCCTCCATCCTGACCTCAGCGGCCCGGCTGGTGAA < 41bp 0.809802780267994 0.589837274764622 0.24511829 0.14010572 prediction 0.439931011006742 Functional Loss - COASY ENSG00000068120 CDS Human protein_coding chr17:40714721 chr17:40714724 synonymous SNV . 0 24 hm5C_associated_SNPs_81975 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:40714693-40714731
64251 chr2 24930526 24930526 1 + C T SKCM 24930523 + 24930503 24930543 41 ACTGGACAGGTACAAGGAAACTCCAGTATAAAACTAGAACT ACTGGACAGGTACAAGGAAACTCTAGTATAAAACTAGAACT < 41bp 0.74038654522349 0.520424965621193 0.8519968 0.05971089 prediction 0.439923159204594 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24930523 chr2:24930526 synonymous SNV . 0 24 hm5C_associated_SNPs_81976 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:24930519-24930545
64251 chr1 161496032 161496032 1 + G A LUSC 161496029 + 161496009 161496049 41 GTTCATGAAGCCGAGCAGTACAAGGCTGAGGATGAGGCCCA GTTCATGAAGCCGAGCAGTACAAAGCTGAGGATGAGGCCCA < 41bp 0.785110656315076 0.565151216302487 0.513207 0.1715543 prediction 0.439918880025178 Functional Loss - HSPA6 ENSG00000173110 CDS Human protein_coding chr1:161496029 chr1:161496032 synonymous SNV . 0 24 hm5C_associated_SNPs_81978 0 0 1 TARBP2 POSTAR2 GSE49648,GSM1204358 chr1:161496020-161496040
64251 chr22 18571120 18571120 1 + G A rs147096782 18571117 + 18571097 18571137 41 GAAAAGGAGGGGTTTGGGGACAGGGACTGTGTCCATGAAAC GAAAAGGAGGGGTTTGGGGACAGAGACTGTGTCCATGAAAC < 41bp 0.764980517340338 0.545027147184525 0.10175535 0.068190336 prediction 0.439906740311627 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18571117 chr22:18571120 . . 0 24 hm5C_associated_SNPs_81980 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:18571097-18571133
64251 chr17 900490 900490 1 + G A COAD 900487 + 900467 900507 41 CTGCAGTACCTGGTGGGTGACAAGCGTCAGCCCCGGCTCCT CTGCAGTACCTGGTGGGTGACAAACGTCAGCCCCGGCTCCT < 41bp 0.794004900298049 0.574058598304332 0.8797129 0.5518 prediction 0.439892603987434 Functional Loss - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900487 chr17:900490 synonymous SNV . 0 24 hm5C_associated_SNPs_81983 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:900467-900505
64251 chr11 76506861 76506861 1 + C T LUSC 76506858 + 76506838 76506878 41 ACAGCCCACTTGGACCTGTCCTCCAACCGGCTGGAGATGGT ACAGCCCACTTGGACCTGTCCTCTAACCGGCTGGAGATGGT < 41bp 0.719942195251078 0.487422374035213 0.9446844 0.8874758 prediction 0.439884390502156 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76506858 chr11:76506861 synonymous SNV . 0 24 hm5C_associated_SNPs_81985 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76506777-76506869
64251 chr11 108005920 108005920 1 + G A BLCA 108005917 + 108005897 108005937 41 CATAAACAAAGTTTGTGCTTCAGGAATGAAAGCCATCATGA CATAAACAAAGTTTGTGCTTCAGAAATGAAAGCCATCATGA < 41bp 0.743932592973066 0.523991854642983 0.34841305 0.17269042 prediction 0.439881476660167 Functional Loss - ACAT1 ENSG00000075239 CDS Human protein_coding chr11:108005917 chr11:108005920 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_81987 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:108005900-108005920
64251 chr16 15122871 15122871 1 + C T UCEC 15122869 + 15122849 15122889 41 CCTTTCAGGTCCCCGTCCATCACCATCCGACCTGCTGGTGA CCTTTCAGGTCCCCGTCCATCATCATCCGACCTGCTGGTGA < 41bp 0.719939341944203 0.454080043499478 0.012448758 0.03487599 prediction 0.439878683888405 Functional Loss - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15122869 chr16:15122871 synonymous SNV . 0 23 hm5C_associated_SNPs_81988 0 0 1 U2AF2 POSTAR2 ENCODE chr16:15122853-15122910
64251 chr11 64877234 64877234 1 + C T UCEC 64877232 + 64877212 64877252 41 TGCAGAGGCCAGGGAAACGGCGCGGCGGCTGCTGACCCACT TGCAGAGGCCAGGGAAACGGCGTGGCGGCTGCTGACCCACT < 41bp 0.811027065731753 0.591092441898095 0.88232434 0.84767616 prediction 0.439869247667316 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64877232 chr11:64877234 nonsynonymous SNV 0.904 3 23 hm5C_associated_SNPs_81991 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64877227-64877255
64251 chr8 66594622 66594622 1 + G A COAD 66594619 + 66594599 66594639 41 TAGGAAGCCATATGGTTCGTCTCGAAGTATCGTAAGGAAAA TAGGAAGCCATATGGTTCGTCTCAAAGTATCGTAAGGAAAA < 41bp 0.71992928239857 0.497647581562761 0.34032854 0.09654218 prediction 0.439858564797141 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66594619 chr8:66594622 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_81994 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr8:66594600-66594673
64251 chr5 43624221 43624221 1 + A T OV 43624217 + 43624197 43624237 41 GCAATTGTTCGAGGATTTGACACAAGGTGAGTGCTTTACTA GCAATTGTTCGAGGATTTGACACATGGTGAGTGCTTTACTA < 41bp 0.719913542347125 0.388250298961748 0.18346584 0.20333555 prediction 0.439827084694251 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43624217 chr5:43624221 stopgain 0.980 1 25 hm5C_associated_SNPs_82000 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:43624203-43624222
64251 chr11 125514440 125514440 1 + C T HNSC 125514438 + 125514418 125514458 41 GCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTGG GCGGTTGGTCAAAAGAATGACATGATTCTTTACCAAATTGG < 41bp 0.719910668102818 0.427589731881869 0.051676214 0.10720557 prediction 0.439821336205637 Functional Loss - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514438 chr11:125514440 stopgain 0.997 1 23 hm5C_associated_SNPs_82002 1 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125514432-125514521
64251 chr11 125514441 125514441 1 + G A STAD 125514438 + 125514418 125514458 41 GCGGTTGGTCAAAAGAATGACACGATTCTTTACCAAATTGG GCGGTTGGTCAAAAGAATGACACAATTCTTTACCAAATTGG < 41bp 0.719910668102818 0.493940644466431 0.051676214 0.036723524 prediction 0.439821336205637 Functional Loss - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125514438 chr11:125514441 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_82003 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125514432-125514521
64251 chr11 65046230 65046230 1 + G A SKCM 65046227 + 65046207 65046247 41 TCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAG TCCCTCCCAGAAATACAACTCACAAAGTAACCGAGGAGAAG < 41bp 0.763213696872963 0.543303126571873 0.06153956 0.028155416 prediction 0.43982114060218 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65046227 chr11:65046230 nonsynonymous SNV 0.642 4 24 hm5C_associated_SNPs_82005 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65046202-65046230
64251 chrX 151870096 151870096 1 + C T LUSC 151870094 + 151870074 151870114 41 ACCTGGAGTACCGGCAGGTCCCCGGCAGTGATCCTGCATGC ACCTGGAGTACCGGCAGGTCCCTGGCAGTGATCCTGCATGC < 41bp 0.800043702934967 0.580134236688037 0.18358943 0.08173752 prediction 0.439818932493861 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870094 chrX:151870096 synonymous SNV . 0 23 hm5C_associated_SNPs_82007 0 0 2 RPS3 POSTAR2 ENCODE chrX:151870081-151870113
64251 chr19 13264528 13264528 1 + C T STAD 13264526 + 13264506 13264546 41 GCGCCTTTCCCAACCTGGCCCGCGTCCTGCAGAGGCGCTTC GCGCCTTTCCCAACCTGGCCCGTGTCCTGCAGAGGCGCTTC < 41bp 0.719903599317009 0.489988120274186 0.4028867 0.4252035 prediction 0.439807198634017 Functional Loss - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264526 chr19:13264528 synonymous SNV . 0 23 hm5C_associated_SNPs_82011 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:13264514-13264587
64251 chr17 37880998 37880998 1 + G T READ 37880995 + 37880975 37881015 41 CCAGGAAGCATACGTGATGGCTGGTGTGGGCTCCCCATATG CCAGGAAGCATACGTGATGGCTGTTGTGGGCTCCCCATATG < 41bp 0.719899938777204 0.319859359052074 0.22512871 0.057007223 prediction 0.439799877554409 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37880995 chr17:37880998 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_82013 1 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:37880988-37881010
64251 chr9 131256869 131256869 1 + T C KIRP 131256868 + 131256848 131256888 41 GATCACGGAGGCGAAGCTGGCTGAGTGCCAAGACCAACTGC GATCACGGAGGCGAAGCTGGCCGAGTGCCAAGACCAACTGC < 41bp 0.719899608853385 0.483849862188544 0.59475064 0.803221 prediction 0.43979921770677 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131256868 chr9:131256869 synonymous SNV . 0 22 hm5C_associated_SNPs_82014 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:131256851-131256919
64251 chr20 47688946 47688946 1 + T C UCEC 47688945 + 47688925 47688965 41 CCTCGTTTTGTTACAGCCATCTGGAATTTACTAGTTACAAC CCTCGTTTTGTTACAGCCATCCGGAATTTACTAGTTACAAC < 41bp 0.803752547320013 0.583853613602159 0.10665175 0.17795935 prediction 0.439797867435709 Functional Loss - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47688945 chr20:47688946 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_82015 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:47688856-47688988
64251 chr19 50189926 50189926 1 + G A BLCA 50189923 + 50189903 50189943 41 TACATGGAGGACTACCTGACCGTGAAGACGGGCGAGGAGAT TACATGGAGGACTACCTGACCGTAAAGACGGGCGAGGAGAT < 41bp 0.774186850981738 0.55429505580407 0.27730918 0.1320759 prediction 0.439783590355334 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50189923 chr19:50189926 synonymous SNV . 0 24 hm5C_associated_SNPs_82018 0 0 13 TARDBP POSTAR2 DRA001158,DRS012385 chr19:50189891-50189942
64251 chr2 113940629 113940629 1 + C T STAD 113940627 + 113940607 113940647 41 CCTGTGGACCTCCCCGGGGACACGGGCCTGCACTCCAGCCC CCTGTGGACCTCCCCGGGGACATGGGCCTGCACTCCAGCCC < 41bp 0.739373082061758 0.519482049034229 0.5644065 0.7122865 prediction 0.43978206605506 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940627 chr2:113940629 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_82021 0 0 1 UCHL5 POSTAR2 ENCODE chr2:113940613-113940696
64251 chr10 95660752 95660752 1 + G A BRCA 95660749 + 95660729 95660769 41 ATCACTGGAGTGATCCTTATCGTGAGACCACCATTTTTGTT ATCACTGGAGTGATCCTTATCGTAAGACCACCATTTTTGTT < 41bp 0.777953639337972 0.558068825003697 0.76640916 0.55714995 prediction 0.43976962866855 Functional Loss - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660749 chr10:95660752 synonymous SNV . 0 24 hm5C_associated_SNPs_82025 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:95660731-95660752
64251 chr16 47533770 47533770 1 + C T COAD 47533767 + 47533747 47533787 41 AAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTGGGC AAGATCCAGGACAGCCTATACTGTGCTGCTGGGGCCTGGGC < 41bp 0.735149645846211 0.51526631854866 0.15710664 0.20696723 prediction 0.439766654595103 Functional Loss - PHKB ENSG00000102893 CDS Human protein_coding chr16:47533767 chr16:47533770 synonymous SNV . 0 24 hm5C_associated_SNPs_82027 2 0 9 LIN28A POSTAR2 GSE39873,GSM980594 chr16:47533760-47533780
64251 chr5 75979011 75979011 1 + G T BLCA 75979009 + 75978989 75979029 41 TGAGTGAATTGCTGGGGTCGCTGGGAGAGGTGCCAACCGTG TGAGTGAATTGCTGGGGTCGCTTGGAGAGGTGCCAACCGTG < 41bp 0.719880031036971 0.378639867889876 0.87492925 0.7866291 prediction 0.439760062073942 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75979009 chr5:75979011 synonymous SNV . 0 23 hm5C_associated_SNPs_82032 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:75978995-75979015
64251 chr19 34304740 34304740 1 + G A rs73929806 34304737 + 34304717 34304757 41 CGTCTTCTAGGTCCCCAGCTCAGGGAGCCATCCCCAGCTCC CGTCTTCTAGGTCCCCAGCTCAGAGAGCCATCCCCAGCTCC < 41bp 0.788663975325551 0.568789349199359 0.934157 0.5381739 prediction 0.439749252252385 Functional Loss - KCTD15 ENSG00000153885 UTR3 Human protein_coding chr19:34304737 chr19:34304740 . . 0 24 hm5C_associated_SNPs_82036 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:34304695-34304741
64251 chr7 1131452 1131452 1 + G A CESC 1131449 + 1131429 1131469 41 CGGCCCCCAACACCACCTCCCCCGAGCTCAACCTGTCCCAC CGGCCCCCAACACCACCTCCCCCAAGCTCAACCTGTCCCAC < 41bp 0.719870460542455 0.468653244387027 0.020549595 0.059785187 prediction 0.439740921084909 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131449 chr7:1131452 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_82039 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1131424-1131471
64251 chrX 129189985 129189985 1 + G A GBM 129189982 + 129189962 129190002 41 AGTCAGCTGCTGACCCCTGCCGAGAGGCCTGGAGGCTTGGA AGTCAGCTGCTGACCCCTGCCGAAAGGCCTGGAGGCTTGGA < 41bp 0.77408449398982 0.554219501908623 0.89866805 0.46749333 prediction 0.439729984162395 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129189982 chrX:129189985 synonymous SNV . 0 24 hm5C_associated_SNPs_82041 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129189980-129190004
64251 chr16 30594260 30594260 1 + C T UCEC 30594258 + 30594238 30594278 41 GGGGCAGCTGTAGGGCTTCTCGCCCGTGTGCTTGCGCTGGT GGGGCAGCTGTAGGGCTTCTCGTCCGTGTGCTTGCGCTGGT < 41bp 0.719863363998829 0.47094994197584 0.19346118 0.26685998 prediction 0.439726727997658 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594258 chr16:30594260 nonsynonymous SNV 0.055 3 23 hm5C_associated_SNPs_82044 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr16:30594247-30594302
64251 chr2 73477497 73477497 1 + C T STAD 73477494 + 73477474 73477514 41 ACCTTCATTCTCCGTGGCGGCGCCGAGCAGTTTATGGAGGA ACCTTCATTCTCCGTGGCGGCGCTGAGCAGTTTATGGAGGA < 41bp 0.719854966169106 0.497406540312908 0.1812883 0.13086995 prediction 0.439709932338213 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477494 chr2:73477497 synonymous SNV . 0 24 hm5C_associated_SNPs_82050 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:73477472-73477498
64251 chr1 226026458 226026458 1 + G T UCEC 226026455 + 226026435 226026475 41 GGCTGGCCCGGCTCTTTCTACGAGTTTTATAAGATCATCCC GGCTGGCCCGGCTCTTTCTACGATTTTTATAAGATCATCCC < 41bp 0.719853891972721 0.310018547173386 0.28885546 0.08172646 prediction 0.439707783945442 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026455 chr1:226026458 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_82052 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:226026440-226026460
64251 chr9 4823599 4823599 1 + G A LUSC 4823596 + 4823576 4823616 41 GGACAAAATAACGAATGGTTCTCGAATTGAAATAAACCAAA GGACAAAATAACGAATGGTTCTCAAATTGAAATAAACCAAA < 41bp 0.726376220764811 0.506530293518198 0.43807048 0.049710095 prediction 0.439691854493226 Functional Loss - RCL1 ENSG00000120158 CDS Human protein_coding chr9:4823596 chr9:4823599 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82054 0 0 1 BUD13 POSTAR2 ENCODE chr9:4823573-4823604
64251 chr5 147040937 147040937 1 - C A KIRC 147040940 - 147040920 147040960 41 GAGCTGGAGCAGCGCAAGCACACGGTGCTGGTGACAGAACT GAGCTGGAGCAGCGCAAGCACACTGTGCTGGTGACAGAACT < 41bp 0.719839468372313 0.331608744021043 0.26146734 0.17447719 prediction 0.439678936744626 Functional Loss - JAKMIP2 ENSG00000176049 CDS Human protein_coding chr5:147040940 chr5:147040937 synonymous SNV . 0 24 hm5C_associated_SNPs_82056 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:147040918-147040939
64251 chr6 158487631 158487631 1 + G A UCEC 158487628 + 158487608 158487648 41 CGGAGCTGACAGACTGGCTGCTCGACTCGCCCCAGCTCTCG CGGAGCTGACAGACTGGCTGCTCAACTCGCCCCAGCTCTCG < 41bp 0.771815698185116 0.551977864103742 0.10862306 0.1071032 prediction 0.439675668162749 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158487628 chr6:158487631 nonsynonymous SNV 0.030 4 24 hm5C_associated_SNPs_82061 0 0 7 EFTUD2 POSTAR2 ENCODE chr6:158487613-158487687
64251 chr9 119460485 119460485 1 + G A UCEC 119460482 + 119460462 119460502 41 GGACTTTGGAGAGAAGTTAACTCGTCTGCGGGAACTTATGG GGACTTTGGAGAGAAGTTAACTCATCTGCGGGAACTTATGG < 41bp 0.719836557179769 0.482939617328294 0.40180457 0.33065164 prediction 0.439673114359538 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460482 chr9:119460485 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_82062 2 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:119460480-119460500
64251 chr9 119460484 119460484 1 + C T UCEC 119460482 + 119460462 119460502 41 GGACTTTGGAGAGAAGTTAACTCGTCTGCGGGAACTTATGG GGACTTTGGAGAGAAGTTAACTTGTCTGCGGGAACTTATGG < 41bp 0.719836557179769 0.440570693760744 0.40180457 0.32170212 prediction 0.439673114359538 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460482 chr9:119460484 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_82063 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:119460480-119460500
64251 chr16 90238127 90238127 1 + G A rs76276116 90238124 + 90238104 90238144 41 TGATCTCCAGGCGGCCTTTGCAGGCCCGGCCTCCTGCCTCT TGATCTCCAGGCGGCCTTTGCAGACCCGGCCTCCTGCCTCT < 41bp 0.799481336079407 0.579645203426505 0.900514 0.6631878 prediction 0.439672265305803 Functional Loss - FAM157C ENSG00000260528 ncRNA_intronic Human lincRNA chr16:90238124 chr16:90238127 . . 0 24 hm5C_associated_SNPs_82064 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:90238090-90238134
64251 chr11 43429013 43429013 1 + A T PAAD 43429009 + 43428989 43429029 41 TCAGAGGGCTTTGAATTTAGCTCCACTTCAATACCAAGATG TCAGAGGGCTTTGAATTTAGCTCCTCTTCAATACCAAGATG < 41bp 0.719830670473512 0.369179683987787 0.051486403 0.03400919 prediction 0.439661340947024 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43429009 chr11:43429013 synonymous SNV . 0 25 hm5C_associated_SNPs_82068 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:43429004-43429023
64251 chr11 65688807 65688807 1 + G A UCEC 65688804 + 65688784 65688824 41 TGCCTTCTGCCCTGCAGCCCCCCGACACCCTTCCTGCCCTT TGCCTTCTGCCCTGCAGCCCCCCAACACCCTTCCTGCCCTT < 41bp 0.788317031749421 0.568493274833255 0.28530926 0.2680223 prediction 0.439647513832333 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65688804 chr11:65688807 synonymous SNV . 0 24 hm5C_associated_SNPs_82072 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:65688800-65688820
64251 chr18 13059227 13059227 1 + G C BLCA 13059226 + 13059206 13059246 41 TGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCG TGTTGCTTCTTGGCCATGTTCCACAGATGCTGAGACCATCG < 41bp 0.719815336749684 0.416911902407273 0.41717476 0.17478213 prediction 0.439630673499368 Functional Loss - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13059226 chr18:13059227 synonymous SNV . 0 22 hm5C_associated_SNPs_82076 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:13059203-13059244
64251 chr20 34501993 34501993 1 + G A SKCM 34501990 + 34501970 34502010 41 AGGAGATCAGTGACACCTCCCAGGAACCTTCTCCACCCAAG AGGAGATCAGTGACACCTCCCAGAAACCTTCTCCACCCAAG < 41bp 0.788214779086084 0.568401387648032 0.13459542 0.022581875 prediction 0.439626782876103 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34501990 chr20:34501993 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82078 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34501974-34502009
64251 chr19 16986967 16986967 1 + C T COAD 16986964 + 16986944 16986984 41 GGTGGGAACCTGTCCTCCCGCTGCGTCCGCGCTGCTAGGGA GGTGGGAACCTGTCCTCCCGCTGTGTCCGCGCTGCTAGGGA < 41bp 0.724019559682496 0.504206356082678 0.1666731 0.14250949 prediction 0.439626407199635 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16986964 chr19:16986967 synonymous SNV . 0 24 hm5C_associated_SNPs_82079 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16986928-16986979
64251 chr11 107968468 107968468 1 + G A UCEC 107968465 + 107968445 107968485 41 GTACCCTCTTCTCAGTGAACCAGGAGTTCAGTTTAATGTAA GTACCCTCTTCTCAGTGAACCAGAAGTTCAGTTTAATGTAA < 41bp 0.741668915420449 0.52186097590759 0.88019085 0.31023628 prediction 0.439615879025718 Functional Loss - CUL5 ENSG00000166266 CDS Human protein_coding chr11:107968465 chr11:107968468 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82081 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:107968439-107968474
64251 chr17 2937472 2937472 1 + G A rs538894361 2937469 + 2937449 2937489 41 TGAGGGGAGGGAGGGGCAGCCCCGAGGCAGTCTCTTCCCTT TGAGGGGAGGGAGGGGCAGCCCCAAGGCAGTCTCTTCCCTT < 41bp 0.71980719632718 0.469622499917658 0.88128877 0.7539197 prediction 0.439614392654359 Functional Loss - RAP1GAP2 ENSG00000132359 UTR3 Human protein_coding chr17:2937469 chr17:2937472 . . 0 24 hm5C_associated_SNPs_82082 0 0 1 XRN2 POSTAR2 ENCODE chr17:2937453-2937491
64251 chr7 39610151 39610151 1 + A C HNSC 39610150 + 39610130 39610170 41 CTGGCAAAGCAGTTACTCTTCAACAGGGCTTCAATCAAGGT CTGGCAAAGCAGTTACTCTTCCACAGGGCTTCAATCAAGGT < 41bp 0.794540453670863 0.574736062948054 0.14637873 0.13858044 prediction 0.439608781445618 Functional Loss - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39610150 chr7:39610151 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_82083 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:39610141-39610168
64251 chr19 36124806 36124806 1 + C T STAD 36124804 + 36124784 36124824 41 GAGCCTGAGCCCCTGCCCCTCCCGTTGGAGGTCGTCCGCGG GAGCCTGAGCCCCTGCCCCTCCTGTTGGAGGTCGTCCGCGG < 41bp 0.719804173611536 0.459946277509697 0.24631378 0.23817435 prediction 0.439608347223071 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124804 chr19:36124806 nonsynonymous SNV 0.587 1 23 hm5C_associated_SNPs_82084 0 0 4 FBL POSTAR2 GSE43666,GSM1067865 chr19:36124771-36124808
64251 chr11 251916 251916 1 + C T LAML 251914 + 251894 251934 41 CCACATGACCTGGGTGCAGCCCCGAGTGTTGGATTTGCAAC CCACATGACCTGGGTGCAGCCCTGAGTGTTGGATTTGCAAC < 41bp 0.859622231853087 0.639822684132093 0.1180093 0.10402241 prediction 0.439599095441988 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:251914 chr11:251916 stopgain 0.960 1 23 hm5C_associated_SNPs_82088 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr11:251890-251919
64251 chr7 92027126 92027126 1 + C T UCEC 92027123 + 92027103 92027143 41 GTGTGCTGCACAGCTCTTCCCTGCGTGACTACACCCCTGCC GTGTGCTGCACAGCTCTTCCCTGTGTGACTACACCCCTGCC < 41bp 0.723872226049357 0.504073679599381 0.38866135 0.2714383 prediction 0.439597092899951 Functional Loss - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92027123 chr7:92027126 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_82091 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr7:92027110-92027133
64251 chr3 143704586 143704586 1 + G A PAAD 143704583 + 143704563 143704603 41 TTGAATTTGCACTCTACCTCCTGGACGTCAGCTTTGACAAT TTGAATTTGCACTCTACCTCCTGAACGTCAGCTTTGACAAT < 41bp 0.749826166320769 0.530043940116917 0.1360982 0.11025685 prediction 0.439564452407705 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143704583 chr3:143704586 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82102 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:143704548-143704586
64251 chr2 190531980 190531980 1 + G T UCEC 190531978 + 190531958 190531998 41 TTAACAGAGAAGGGAATAAACAGAAAAATAAATGTGAAATA TTAACAGAGAAGGGAATAAACATAAAAATAAATGTGAAATA < 41bp 0.883468080209023 0.663692485425946 0.84364563 0.28580427 prediction 0.439551189566153 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531978 chr2:190531980 nonsynonymous SNV 0.029 0 23 hm5C_associated_SNPs_82106 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190531888-190532031
64251 chr13 111371582 111371582 1 + T C UCEC 111371581 + 111371561 111371601 41 CCTTCTTGCCCCCAGAGATCCTGAAGGAGCTAGACGAGTGC CCTTCTTGCCCCCAGAGATCCCGAAGGAGCTAGACGAGTGC < 41bp 0.79459076856444 0.574815456816084 0.32524845 0.23826155 prediction 0.439550623496713 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371581 chr13:111371582 nonsynonymous SNV 0.747 4 22 hm5C_associated_SNPs_82108 0 0 1 BUD13 POSTAR2 ENCODE chr13:111371528-111371620
64251 chr14 75476071 75476071 1 + G C rs4556 75476067 + 75476047 75476087 41 CCCGTAACAAGGGCACACATCCAGGACTGTGTCTTGCCTTT CCCGTAACAAGGGCACACATCCAGCACTGTGTCTTGCCTTT < 41bp 0.719770102447346 0.434061772176036 0.91838825 0.24515113 prediction 0.439540204894693 Functional Loss - EIF2B2 ENSG00000119718 UTR3 Human protein_coding chr14:75476067 chr14:75476071 . . 0 25 hm5C_associated_SNPs_82109 2 0 4 UPF1 POSTAR2 GSE69586,GSM1704214 chr14:75476060-75476081
64251 chr12 124229290 124229290 1 + C T SKCM 124229287 + 124229267 124229307 41 AACGTGTCGGCCATGTACAGCTCCAGCCACCCACCCGCAGA AACGTGTCGGCCATGTACAGCTCTAGCCACCCACCCGCAGA < 41bp 0.723735408155377 0.503977091758057 0.76706326 0.529486 prediction 0.43951663279464 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124229287 chr12:124229290 synonymous SNV . 0 24 hm5C_associated_SNPs_82113 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:124229278-124229304
64251 chr12 46242662 46242662 1 + C T LGG 46242660 + 46242640 46242680 41 AAATCCAGATTGTTCTGTTTCTCGAGCAGAAATGTATTCTG AAATCCAGATTGTTCTGTTTCTTGAGCAGAAATGTATTCTG < 41bp 0.719754830031529 0.427679499754686 0.091174245 0.14066592 prediction 0.439509660063058 Functional Loss - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46242660 chr12:46242662 stopgain 1.000 1 23 hm5C_associated_SNPs_82114 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:46242660-46242680
64251 chr12 2912387 2912387 1 + C T COAD 2912385 + 2912365 2912405 41 AAGGAGGAGCAGAAGAGCAACACGGCAGGGAGCCAGTCTCA AAGGAGGAGCAGAAGAGCAACATGGCAGGGAGCCAGTCTCA < 41bp 0.805229130721494 0.585484137012917 0.22279143 0.28726375 prediction 0.439489987417153 Functional Loss - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2912385 chr12:2912387 nonsynonymous SNV 0.030 1 23 hm5C_associated_SNPs_82120 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:2912380-2912400
64251 chr20 10603436 10603436 1 + C T SKCM 10603433 + 10603413 10603453 41 AGGAATGATGGTCAGGCTTCCTCCAGTCCCCCATCAGAATC AGGAATGATGGTCAGGCTTCCTCTAGTCCCCCATCAGAATC < 41bp 0.741444729537382 0.521701839437596 0.94805944 0.8933517 prediction 0.439485780199571 Functional Loss - SLX4IP ENSG00000149346 CDS Human protein_coding chr20:10603433 chr20:10603436 synonymous SNV . 0 24 hm5C_associated_SNPs_82121 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr20:10603428-10603449
64251 chr19 44740547 44740547 1 + C T UCEC 44740545 + 44740525 44740565 41 CAATCCCATCAGAGAGTCCACACGGGGGAAAAGCCATACAA CAATCCCATCAGAGAGTCCACATGGGGGAAAAGCCATACAA < 41bp 0.798345945128421 0.578604901775384 0.549466 0.6957124 prediction 0.439482086706073 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44740545 chr19:44740547 nonsynonymous SNV 0.579 3 23 hm5C_associated_SNPs_82122 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44740395-44740547
64251 chr6 111208777 111208777 1 + G T STAD 111208775 + 111208755 111208795 41 GTGTGACAAAAACTGACAAGCAGGAAGCTTATGTACTCAGG GTGTGACAAAAACTGACAAGCATGAAGCTTATGTACTCAGG < 41bp 0.719740324432898 0.40301657300739 0.24018103 0.05508226 prediction 0.439480648865795 Functional Loss - AMD1 ENSG00000123505 CDS Human protein_coding chr6:111208775 chr6:111208777 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_82123 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:111208693-111208782
64251 chr10 38652501 38652501 1 + A T BRCA 38652497 + 38652477 38652517 41 AGATCACTGCTGATGGACTTCAGGAGGTGTTTGAGACCGAT AGATCACTGCTGATGGACTTCAGGTGGTGTTTGAGACCGAT < 41bp 0.874626686518157 0.65488974156037 0.90119344 0.89925337 prediction 0.439473889915576 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38652497 chr10:38652501 . . 0 25 hm5C_associated_SNPs_82126 0 0 2 PPIG POSTAR2 ENCODE chr10:38652487-38652535
64251 chr6 10751419 10751419 1 + G A READ 10751416 + 10751396 10751436 41 TCTTCGGCAGTCTAGCCGGCCTGGGTGCTTACCAGCTGTAT TCTTCGGCAGTCTAGCCGGCCTGAGTGCTTACCAGCTGTAT < 41bp 0.772020974267411 0.552290466960346 0.8980979 0.43456742 prediction 0.43946101461413 Functional Loss - TMEM14B ENSG00000137210 CDS Human protein_coding chr6:10751416 chr6:10751419 nonsynonymous SNV 0.341 4 24 hm5C_associated_SNPs_82132 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:10751387-10751440
64251 chr19 7677172 7677172 1 + C T UCEC 7677170 + 7677150 7677190 41 GCCCCGCCGGAGGCCCTGAGCTCGGAGATGAGTGAGCTCAG GCCCCGCCGGAGGCCCTGAGCTTGGAGATGAGTGAGCTCAG < 41bp 0.817056693913116 0.597329534977334 0.17676342 0.17796797 prediction 0.439454317871563 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677170 chr19:7677172 nonsynonymous SNV 0.955 3 23 hm5C_associated_SNPs_82135 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7677155-7677192
64251 chr6 30539328 30539328 1 + A T SKCM 30539324 + 30539304 30539344 41 TGGATCGGGGACGGAGAGAGCACGAGCCCATCAGGTGAGGC TGGATCGGGGACGGAGAGAGCACGTGCCCATCAGGTGAGGC < 41bp 0.72602162591374 0.506299192349477 0.43239772 0.20419312 prediction 0.439444867128526 Functional Loss - ABCF1 ENSG00000204574 CDS Human protein_coding chr6:30539324 chr6:30539328 nonsynonymous SNV 0.012 1 25 hm5C_associated_SNPs_82139 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:30539303-30539332
64251 chr19 39860580 39860580 1 + G A SARC 39860577 + 39860557 39860597 41 GTTGGCTAGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACC GTTGGCTAGTGGCTTCCGCTCCCAGCCAGAGCCCTCCTACC < 41bp 0.719716099366213 0.454046122338391 0.21066988 0.07261157 prediction 0.439432198732425 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860577 chr19:39860580 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_82141 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:39860552-39860585
64251 chr19 39860579 39860579 1 + C T UCEC 39860577 + 39860557 39860597 41 GTTGGCTAGTGGCTTCCGCTCCCGGCCAGAGCCCTCCTACC GTTGGCTAGTGGCTTCCGCTCCTGGCCAGAGCCCTCCTACC < 41bp 0.719716099366213 0.457359250303177 0.21066988 0.23944956 prediction 0.439432198732425 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39860577 chr19:39860579 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_82142 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:39860552-39860585
64251 chr3 14523295 14523295 1 + C T rs139497814 14523292 + 14523272 14523312 41 CTGGCCCTTTCCTCCATGCTCTGCGTTCCCTTGGTCATCGT CTGGCCCTTTCCTCCATGCTCTGTGTTCCCTTGGTCATCGT < 41bp 0.727738890582287 0.508031146488522 0.10976687 0.076907456 prediction 0.439415488187532 Functional Loss - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14523292 chr3:14523295 synonymous SNV . 0 24 hm5C_associated_SNPs_82149 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:14523251-14523310
64251 chr3 45048966 45048966 1 + G A UCEC 45048963 + 45048943 45048983 41 TTCAGGAGGAGGCCTGCTCGCTGGCCAGCTTGCTGGTGTCG TTCAGGAGGAGGCCTGCTCGCTGACCAGCTTGCTGGTGTCG < 41bp 0.803663207376989 0.583957626169786 0.054126114 0.020275295 prediction 0.439411162414405 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45048963 chr3:45048966 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_82150 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr3:45048945-45048977
64251 chr21 37507579 37507579 1 + C T HNSC 37507577 + 37507557 37507597 41 CGCGAACTGTGCCGACAGTTCTCTGGGGATGTGGTGCTCAC CGCGAACTGTGCCGACAGTTCTTTGGGGATGTGGTGCTCAC < 41bp 0.810489266397954 0.59078684571651 0.21931231 0.1386669 prediction 0.439404841362887 Functional Loss - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37507577 chr21:37507579 nonsynonymous SNV 0.982 1 23 hm5C_associated_SNPs_82151 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:37507578-37507579
64251 chr9 131479161 131479161 1 + G A BRCA 131479158 + 131479138 131479178 41 TTTGTGCCTGGTGGTGACCTCATGATGCAGATCCACGAGGA TTTGTGCCTGGTGGTGACCTCATAATGCAGATCCACGAGGA < 41bp 0.799380888296827 0.579678986365875 0.29630196 0.2002793 prediction 0.439403803861903 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131479158 chr9:131479161 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82152 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131479126-131479162
64251 chr1 150444096 150444096 1 + C T SKCM 150444093 + 150444073 150444113 41 TGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCC TGGGGTAAAGTCTGCCTTCCCTCTATCTGTAAGGGCCCTCC < 41bp 0.772469251392064 0.552770399183885 0.94558907 0.768385 prediction 0.439397704416358 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150444093 chr1:150444096 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_82153 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:150444071-150444109
64251 chr6 72003052 72003052 1 + G A SKCM 72003049 + 72003029 72003069 41 AAGAGAAGTTTTTATGCTGCCAGGGATTTGTACAAGTACCG AAGAGAAGTTTTTATGCTGCCAGAGATTTGTACAAGTACCG < 41bp 0.77277625994107 0.553080091433732 0.78875786 0.7849326 prediction 0.439392337014676 Functional Loss - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003049 chr6:72003052 synonymous SNV . 0 24 hm5C_associated_SNPs_82154 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:72003033-72003064
64251 chr19 57803422 57803422 1 + G A READ 57803419 + 57803399 57803439 41 TTCACACTGCAGAGAAGTCCCACGAACCCATCCAGAGTGGG TTCACACTGCAGAGAAGTCCCACAAACCCATCCAGAGTGGG < 41bp 0.794081766549817 0.574386320148339 0.062007517 0.040765226 prediction 0.439390892802957 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57803419 chr19:57803422 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_82155 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57803385-57803428
64251 chr17 7324486 7324486 1 + G A UCEC 7324483 + 7324463 7324503 41 TTCCAACACACTCAGGGGACCTGGGTTCCCTGGTCTCAGGA TTCCAACACACTCAGGGGACCTGAGTTCCCTGGTCTCAGGA < 41bp 0.795185272163142 0.575490869358541 0.93353796 0.35603482 prediction 0.439388805609202 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324483 chr17:7324486 stopgain 0.014 0 24 hm5C_associated_SNPs_82156 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7324461-7324494
64251 chr13 114174950 114174950 1 + C T STAD 114174947 + 114174927 114174967 41 ACAGGCGACATTGACTACAGCACCGTGCTCCTCGGCATGCT ACAGGCGACATTGACTACAGCACTGTGCTCCTCGGCATGCT < 41bp 0.728876758680047 0.509184795447071 0.014111489 0.021640956 prediction 0.439383926465952 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114174947 chr13:114174950 synonymous SNV . 0 24 hm5C_associated_SNPs_82158 0 0 7 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr13:114174946-114174965
64251 chr9 71869245 71869245 1 + C T LGG 71869243 + 71869223 71869263 41 AGCTGTCAGAACACTCCAAGCGCGGTTACTATGGCCAGTCT AGCTGTCAGAACACTCCAAGCGTGGTTACTATGGCCAGTCT < 41bp 0.719685432520648 0.461174398260581 0.91482216 0.90605855 prediction 0.439370865041297 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71869243 chr9:71869245 synonymous SNV . 0 23 hm5C_associated_SNPs_82162 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:71869227-71869281
64251 chr6 160221774 160221774 1 + G A COAD 160221771 + 160221751 160221791 41 AGTGCTGGCGATGTTCTGCACCCGAGGACTGCTATTTTTTG AGTGCTGGCGATGTTCTGCACCCAAGGACTGCTATTTTTTG < 41bp 0.719678120515024 0.476447682089827 0.12431246 0.039109588 prediction 0.439356241030048 Functional Loss - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160221771 chr6:160221774 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_82164 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:160221741-160221783
64251 chr3 141163375 141163375 1 + G A UCEC 141163372 + 141163352 141163392 41 AGCTACAGTGGCTCTGCACCCTCGGTCATTGTACACAGCAG AGCTACAGTGGCTCTGCACCCTCAGTCATTGTACACAGCAG < 41bp 0.775301932670987 0.555630575183938 0.051278263 0.030482858 prediction 0.439342714974097 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141163372 chr3:141163375 synonymous SNV . 0 24 hm5C_associated_SNPs_82166 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:141163348-141163382
64251 chr12 56863182 56863182 1 + G A LUAD 56863179 + 56863159 56863199 41 CAGTTGAGGGTATTGGGCAGCCAGAGAAGGTGGGGCTGTTG CAGTTGAGGGTATTGGGCAGCCAAAGAAGGTGGGGCTGTTG < 41bp 0.719661423730516 0.486459543440726 0.78726196 0.83656234 prediction 0.439322847461032 Functional Loss - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863179 chr12:56863182 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_82169 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:56863151-56863183
64251 chr17 40845456 40845456 1 + G A STAD 40845453 + 40845433 40845473 41 CACAGGCCACTGTGCCCACCCTCGGCTCCCCTGTTTCCATG CACAGGCCACTGTGCCCACCCTCAGCTCCCCTGTTTCCATG < 41bp 0.803976390062155 0.584316097342918 0.026355654 0.015110344 prediction 0.439320585438474 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40845453 chr17:40845456 nonsynonymous SNV 0.931 0 24 hm5C_associated_SNPs_82170 0 0 1 SND1 POSTAR2 ENCODE chr17:40845447-40845498
64251 chr22 25855396 25855396 1 + T C STAD 25855395 + 25855375 25855415 41 CCCTGCAGGTGGGTTGGCTACTAGTACCCTGGCTACCGTGG CCCTGCAGGTGGGTTGGCTACCAGTACCCTGGCTACCGTGG < 41bp 0.745474287915039 0.525822483577359 0.3919472 0.3487107 prediction 0.439303608675359 Functional Loss - CRYBB2P1 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25855395 chr22:25855396 . . 0 22 hm5C_associated_SNPs_82175 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:25855380-25855400
64251 chr11 93486874 93486874 1 + G T OV 93486872 + 93486852 93486892 41 CTGTGGGAAAACTAGAATTGCAGAAGTTGGAGGTGTGCCTT CTGTGGGAAAACTAGAATTGCATAAGTTGGAGGTGTGCCTT < 41bp 0.719650746212452 0.388016971576552 0.8935944 0.867898 prediction 0.439301492424903 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93486872 chr11:93486874 stopgain 1.000 1 23 hm5C_associated_SNPs_82176 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:93486861-93486891
64251 chr7 127229639 127229639 1 + G A BLCA 127229636 + 127229616 127229656 41 CCTCTGTGGCGGCACTACTTCCAGAACACTCAGGTGGAGTG CCTCTGTGGCGGCACTACTTCCAAAACACTCAGGTGGAGTG < 41bp 0.777847268816219 0.558196704665084 0.88731015 0.35770524 prediction 0.43930112830227 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127229636 chr7:127229639 synonymous SNV . 0 24 hm5C_associated_SNPs_82177 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:127229607-127229642
64251 chrX 54953058 54953058 1 + G T UCS 54953055 + 54953035 54953075 41 GCGCAAGTTGGGGCTGCGCCCTGGGTATGACTGGGCTCTCT GCGCAAGTTGGGGCTGCGCCCTGTGTATGACTGGGCTCTCT < 41bp 0.927611363568045 0.70798068845294 0.84846264 0.29583868 prediction 0.43926135023021 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54953055 chrX:54953058 nonsynonymous SNV 0.959 3 24 hm5C_associated_SNPs_82186 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54953057-54953087
64251 chr1 229438700 229438700 1 + G A UCEC 229438697 + 229438677 229438717 41 TCACCGCGGCGCGCACAGGCCCCGAACGCTCAGGAGTGTGG TCACCGCGGCGCGCACAGGCCCCAAACGCTCAGGAGTGTGG < 41bp 0.76943575848047 0.549809124180626 0.01740256 0.014369726 prediction 0.439253268599687 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229438697 chr1:229438700 synonymous SNV . 0 24 hm5C_associated_SNPs_82189 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:229438623-229438725
64251 chr2 122522753 122522753 1 + G A CESC 122522750 + 122522730 122522770 41 CGTGACTGCTGGAGACTACTCCCGACCCCTCCACATCTCCA CGTGACTGCTGGAGACTACTCCCAACCCCTCCACATCTCCA < 41bp 0.771902572000777 0.552276841592091 0.03319478 0.014240861 prediction 0.439251460817372 Functional Loss - TSN ENSG00000211460 CDS Human protein_coding chr2:122522750 chr2:122522753 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_82191 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:122522722-122522753
64251 chr6 7404698 7404698 1 + G A STAD 7404695 + 7404675 7404715 41 CCAGTTATCAGAATCCAAGGCTCGGGAGTTGTACCTGCAGG CCAGTTATCAGAATCCAAGGCTCAGGAGTTGTACCTGCAGG < 41bp 0.774344103408211 0.554728590190497 0.15904987 0.08753443 prediction 0.439231026435429 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7404695 chr6:7404698 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_82193 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:7404643-7404704
64251 chr2 187519428 187519428 1 + G A SKCM 187519425 + 187519405 187519445 41 GATGGCAAAGGAGTACTTCCCAGGAAACTTAGTAAGTGTTC GATGGCAAAGGAGTACTTCCCAGAAAACTTAGTAAGTGTTC < 41bp 0.719610870889746 0.498062492577155 0.7316086 0.28525493 prediction 0.439221741779492 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187519425 chr2:187519428 synonymous SNV . 0 24 hm5C_associated_SNPs_82195 0 0 2 SF3B1 POSTAR2 ENCODE chr2:187519425-187519434
64251 chr2 74682696 74682696 1 + G T SARC 74682693 + 74682673 74682713 41 CCTCAGCTCAAACTCAAAATCAAGCTTGGGGGACAAGTCCT CCTCAGCTCAAACTCAAAATCAATCTTGGGGGACAAGTCCT < 41bp 0.719600576367127 0.321544333947067 0.14938796 0.03837198 prediction 0.439201152734254 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74682693 chr2:74682696 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_82200 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74682682-74682704
64251 chr7 131128433 131128433 1 + G A UCEC 131128430 + 131128410 131128450 41 TGGGCCTGAGGACATCCAGTCTCGAATAGGACACTGCATGT TGGGCCTGAGGACATCCAGTCTCAAATAGGACACTGCATGT < 41bp 0.726476410379701 0.506875994827701 0.7189522 0.14396298 prediction 0.439200831104001 Functional Loss - MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131128430 chr7:131128433 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_82201 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr7:131128364-131128447
64251 chr12 54403232 54403232 1 + A C COAD 54403231 + 54403211 54403251 41 GCTTCCAGCACGCTTCGCACCACGTTCAAGACTTCTTCCAC GCTTCCAGCACGCTTCGCACCCCGTTCAAGACTTCTTCCAC < 41bp 0.808727006915918 0.589129120360839 0.10177976 0.077908754 prediction 0.439195773110158 Functional Loss - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54403231 chr12:54403232 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_82202 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:54403230-54403268
64251 chr19 11094881 11094881 1 + G A rs529632222 11094878 + 11094858 11094898 41 ACTCCTCGGCCAGGTCCTTCCCCGGGCCCTGGCCCTTCCCC ACTCCTCGGCCAGGTCCTTCCCCAGGCCCTGGCCCTTCCCC < 41bp 0.766892185977927 0.547301117212452 0.9220497 0.8605392 prediction 0.439182137530951 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11094878 chr19:11094881 synonymous SNV . 0 24 hm5C_associated_SNPs_82204 1 0 7 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:11094856-11094894
64251 chr19 50360963 50360963 1 + G A COAD 50360960 + 50360940 50360980 41 CTTCCAACAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCC CTTCCAACAGGCAGTGGGACCTGATGGTGTCAACTCAGGCC < 41bp 0.719588856631355 0.471062391055157 0.31032678 0.17817333 prediction 0.439177713262709 Functional Loss - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50360960 chr19:50360963 nonsynonymous SNV 0.615 2 24 hm5C_associated_SNPs_82206 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50360950-50360977
64251 chr21 47669803 47669803 1 + C T rs571036132 47669801 + 47669781 47669821 41 AATAAGTAACAGTACCCATACACAGGTGGCAGAGACGCTAG AATAAGTAACAGTACCCATACATAGGTGGCAGAGACGCTAG < 41bp 0.742325457837991 0.522738682398413 0.0071494877 0.028752267 prediction 0.439173550879156 Functional Loss - MCM3AP-AS1 ENSG00000215424 ncRNA_exonic Human antisense chr21:47669801 chr21:47669803 . . 0 23 hm5C_associated_SNPs_82208 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:47669778-47669805
64251 chr1 10479708 10479708 1 + G C LUSC 10479704 + 10479684 10479724 41 TAGGCTCAGCGGGATTACTTCGGGGCTCACACCTATGAACT TAGGCTCAGCGGGATTACTTCGGGCCTCACACCTATGAACT < 41bp 0.860162319417461 0.640578178066535 0.9490836 0.93960464 prediction 0.439168282701851 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10479704 chr1:10479708 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_82210 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:10479690-10479727
64251 chr6 168307864 168307864 1 + T C OV 168307863 + 168307843 168307883 41 CCATGTAGAGCACCACTAGGCTGGACAGCGACAGAGTGTCG CCATGTAGAGCACCACTAGGCCGGACAGCGACAGAGTGTCG < 41bp 0.719568738833904 0.478014318200704 0.07543415 0.09019703 prediction 0.439137477667808 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168307863 chr6:168307864 nonsynonymous SNV 0.142 0 22 hm5C_associated_SNPs_82215 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:168307841-168307874
64251 chr7 98611269 98611269 1 + G A UCEC 98611266 + 98611246 98611286 41 TGGAGAGTGTGCGGAGTGTACACGAAGCATGCCCGGAGGCT TGGAGAGTGTGCGGAGTGTACACAAAGCATGCCCGGAGGCT < 41bp 0.779146711029991 0.559580530167819 0.12025532 0.045171946 prediction 0.439132361724343 Functional Loss - LOC101927550 ENSG00000242687 ncRNA_exonic Human antisense chr7:98611266 chr7:98611269 . . 0 24 hm5C_associated_SNPs_82216 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:98611269-98611270
64251 chr6 155109058 155109058 1 + C T UCEC 155109055 + 155109035 155109075 41 ACTCCATTGTGCGACAATCCCGACATCAGTTTGGTCAAGAA ACTCCATTGTGCGACAATCCCGATATCAGTTTGGTCAAGAA < 41bp 0.754182802532988 0.534618199212489 0.19013327 0.23322496 prediction 0.439129206640996 Functional Loss - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155109055 chr6:155109058 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_82217 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:155109054-155109105
64251 chr2 24286001 24286001 1 + C T SKCM 24285999 + 24285979 24286019 41 GCATATGGAGCCACGGGCCACCCCGGTGTCATCCCTCCCAA GCATATGGAGCCACGGGCCACCTCGGTGTCATCCCTCCCAA < 41bp 0.815051881536407 0.595492969683132 0.09387618 0.090608954 prediction 0.439117823706551 Functional Loss - FKBP1B ENSG00000119782 CDS Human protein_coding chr2:24285999 chr2:24286001 nonsynonymous SNV 0.953 2 23 hm5C_associated_SNPs_82220 0 0 1 LARP4 POSTAR2 ENCODE chr2:24285895-24286022
64251 chr3 20164252 20164252 1 + G C rs553434368 20164248 + 20164228 20164268 41 ATTCCGATGGAATTAATCAACGAGGTTATGTCTACCATCAC ATTCCGATGGAATTAATCAACGAGCTTATGTCTACCATCAC < 41bp 0.856269317317964 0.636711275547225 0.86490244 0.47142655 prediction 0.439116083541479 Functional Loss - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20164248 chr3:20164252 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_82222 0 0 1 BUD13 POSTAR2 ENCODE chr3:20164141-20164282
64251 chr6 57189026 57189026 1 + C T COAD 57189024 + 57189004 57189044 41 CTTAGAAGATGAATATGAACCACGAAGAAGAGATCATATTT CTTAGAAGATGAATATGAACCATGAAGAAGAGATCATATTT < 41bp 0.719557650345068 0.449882831561315 0.033824623 0.04613045 prediction 0.439115300690135 Functional Loss - PRIM2 ENSG00000146143 CDS Human protein_coding chr6:57189024 chr6:57189026 stopgain 0.993 0 23 hm5C_associated_SNPs_82223 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:57189002-57189036
64251 chr7 193254 193254 1 + G T rs529612835 193251 + 193231 193271 41 TGCTCATCCTGATGGTGTTCCTGGTGGCCTGCGCGCTGCAC TGCTCATCCTGATGGTGTTCCTGTTGGCCTGCGCGCTGCAC < 41bp 0.719556832362248 0.319737341785728 0.50406885 0.17274308 prediction 0.439113664724496 Functional Loss - FAM20C ENSG00000177706 CDS Human protein_coding chr7:193251 chr7:193254 nonsynonymous SNV 0.946 1 24 hm5C_associated_SNPs_82224 0 0 4 DDX3X POSTAR2 ENCODE chr7:193229-193317
64251 chr14 100374010 100374010 1 + C T COAD 100374007 + 100373987 100374027 41 AATCTCTGTGCTGTGGATGACTCCAACGACCATGTGCTCTC AATCTCTGTGCTGTGGATGACTCTAACGACCATGTGCTCTC < 41bp 0.719550977647427 0.475542670894914 0.9612525 0.92739093 prediction 0.439101955294853 Functional Loss - EML1 ENSG00000066629 CDS Human protein_coding chr14:100374007 chr14:100374010 synonymous SNV . 0 24 hm5C_associated_SNPs_82230 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:100373989-100374011
64251 chr10 50535125 50535125 1 + G A rs115951880 50535122 + 50535102 50535142 41 CCTCTGATGGAGGGGCACTGCTTGCTTGGCCCGGTCCCCTC CCTCTGATGGAGGGGCACTGCTTACTTGGCCCGGTCCCCTC < 41bp 0.733698468588537 0.514148230764434 0.06486404 0.023923784 prediction 0.439100475648206 Functional Loss - C10orf71 ENSG00000177354 UTR3 Human protein_coding chr10:50535122 chr10:50535125 . . 0 24 hm5C_associated_SNPs_82231 0 0 1 AGGF1 POSTAR2 ENCODE chr10:50535022-50535131
64251 chr3 12421374 12421374 1 + G A SKCM 12421371 + 12421351 12421391 41 TTACGAAGACATTCCATTCACAAGAACAGATCCAGTGGTTG TTACGAAGACATTCCATTCACAAAAACAGATCCAGTGGTTG < 41bp 0.727403837124849 0.50786101540003 0.014599323 0.007586777 prediction 0.439085643449639 Functional Loss - PPARG ENSG00000132170 CDS Human protein_coding chr3:12421371 chr3:12421374 nonsynonymous SNV 0.669 1 24 hm5C_associated_SNPs_82235 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr3:12421357-12421378
64251 chr1 181018308 181018308 1 + G A UCEC 181018305 + 181018285 181018325 41 CACCACATATGACAGTGTCACTCGGCAGAAGGAGCCACGGG CACCACATATGACAGTGTCACTCAGCAGAAGGAGCCACGGG < 41bp 0.802425967414639 0.582884205601177 0.08822876 0.09381342 prediction 0.439083523626922 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181018305 chr1:181018308 nonsynonymous SNV 0.108 0 24 hm5C_associated_SNPs_82236 0 0 3 SND1 POSTAR2 ENCODE chr1:181018249-181018386
64251 chr19 8321506 8321506 1 + T C UCEC 8321505 + 8321485 8321525 41 GTCCTGTCCTGCTGCAGACTCTGAAGCCATCCCTGTACTGG GTCCTGTCCTGCTGCAGACTCCGAAGCCATCCCTGTACTGG < 41bp 0.782539068560953 0.562999778986047 0.358845 0.61343634 prediction 0.439078579149812 Functional Loss - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8321505 chr19:8321506 nonsynonymous SNV 0.164 3 22 hm5C_associated_SNPs_82238 0 0 1 BUD13 POSTAR2 ENCODE chr19:8321491-8321522
64251 chr22 19423197 19423197 1 + T C UCEC 19423196 + 19423176 19423216 41 GGAGCTCACCTTTGAGGAGACTGAGAGGAGAGCTCTGCTTC GGAGCTCACCTTTGAGGAGACCGAGAGGAGAGCTCTGCTTC < 41bp 0.765527991615535 0.545990235653619 0.46978167 0.36851013 prediction 0.439075511923832 Functional Loss - MRPL40 ENSG00000185608 CDS Human protein_coding chr22:19423196 chr22:19423197 synonymous SNV . 0 22 hm5C_associated_SNPs_82241 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:19423194-19423217
64251 chr15 40509785 40509785 1 + G T ESCA 40509782 + 40509762 40509802 41 GTGTTGACCTTAGGGTGCAGCTGGATGTTTTTACCCTCAGC GTGTTGACCTTAGGGTGCAGCTGTATGTTTTTACCCTCAGC < 41bp 0.719536589116685 0.33079013996431 0.52844197 0.25607544 prediction 0.439073178233369 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40509782 chr15:40509785 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_82242 0 0 2 RBM15 POSTAR2 ENCODE chr15:40509757-40509816
64251 chr19 34856060 34856060 1 + G A rs8191358 34856057 + 34856037 34856077 41 TGGGGCCGGGCCGGGCCGGGCCGGGCGCCTGCGCCATAAAG TGGGGCCGGGCCGGGCCGGGCCGAGCGCCTGCGCCATAAAG < 41bp 0.737558057365879 0.518022638807988 0.88437176 0.70495427 prediction 0.439070837115782 Functional Loss - GPI ENSG00000105220 UTR5 Human protein_coding chr19:34856057 chr19:34856060 . . 0 24 hm5C_associated_SNPs_82244 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:34856060-34856080
64251 chr11 63967459 63967459 1 + C T rs146903932 63967457 + 63967437 63967477 41 AGCGGCTGGCCTACATAAACCCCGACCTGGCTTTGGAGGAG AGCGGCTGGCCTACATAAACCCTGACCTGGCTTTGGAGGAG < 41bp 0.719534858082111 0.42644641959898 0.015686393 0.015252084 prediction 0.439069716164221 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63967457 chr11:63967459 synonymous SNV . 0 23 hm5C_associated_SNPs_82245 0 0 19 DGCR8 POSTAR2 GSE39086,GSM955512 chr11:63967420-63967480
64251 chr16 28847500 28847500 1 + G A KIRC 28847497 + 28847477 28847517 41 GAGGAGCCGATGACAGGATTCGTGAGTTCTCATTAGCTGGG GAGGAGCCGATGACAGGATTCGTAAGTTCTCATTAGCTGGG < 41bp 0.742726482871592 0.523191926404741 0.29868275 0.13676733 prediction 0.439069112933702 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847497 chr16:28847500 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82246 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:28847471-28847546
64251 chr6 161470780 161470780 1 + G T UCEC 161470777 + 161470757 161470797 41 CAGTCGCGGGACTGCATATCCAAGAAGCTTGAGAGGCTCGA CAGTCGCGGGACTGCATATCCAATAAGCTTGAGAGGCTCGA < 41bp 0.719531325148334 0.43381213312299 0.3695537 0.058004647 prediction 0.439062650296669 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470777 chr6:161470780 nonsynonymous SNV 0.936 0 24 hm5C_associated_SNPs_82251 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:161470762-161470787
64251 chr20 48808449 48808449 1 + G T COAD 48808446 + 48808426 48808466 41 CGCAAGAGCCGCGACAAGGCCAAGATGCGCAACCTGGAGAC CGCAAGAGCCGCGACAAGGCCAATATGCGCAACCTGGAGAC < 41bp 0.925808488975177 0.706282311696118 0.42130578 0.13931572 prediction 0.439052354558117 Functional Loss - CEBPB ENSG00000172216 CDS Human protein_coding chr20:48808446 chr20:48808449 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82254 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:48808440-48808495
64251 chr2 9628400 9628400 1 + G T UCEC 9628398 + 9628378 9628418 41 CTACCTTTGCTGCTTCCTTACTGGCGGGATGTAGCAGAAGC CTACCTTTGCTGCTTCCTTACTTGCGGGATGTAGCAGAAGC < 41bp 0.719525513388996 0.38249726379843 0.20880088 0.021270156 prediction 0.439051026777991 Functional Loss - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9628398 chr2:9628400 nonsynonymous SNV 0.866 3 23 hm5C_associated_SNPs_82255 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:9628386-9628420
64251 chr1 165877039 165877039 1 + G C LUAD 165877035 + 165877015 165877055 41 TTCACGCAAGAGGCAGGCATCGGAGTCCAGCAGCAGGCCGC TTCACGCAAGAGGCAGGCATCGGACTCCAGCAGCAGGCCGC < 41bp 0.854667585714949 0.635148997848572 0.93139726 0.5342296 prediction 0.439037175732754 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165877035 chr1:165877039 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_82257 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:165877022-165877085
64251 chr1 170508453 170508453 1 + A T LUSC 170508449 + 170508429 170508469 41 AAAGCCAAAAACTTGGGCTTCAAGATGGATCAACCTCATTA AAAGCCAAAAACTTGGGCTTCAAGTTGGATCAACCTCATTA < 41bp 0.71951338437003 0.448059339312635 0.16285959 0.080228746 prediction 0.439026768740061 Functional Loss - GORAB ENSG00000120370 CDS Human protein_coding chr1:170508449 chr1:170508453 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_82261 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:170508449-170508464
64251 chr3 133476701 133476701 1 + G T UCEC 133476699 + 133476679 133476719 41 CTGTTTAAGGACTCTGCCCACGGGTTTTTAAAAGTCCCCCC CTGTTTAAGGACTCTGCCCACGTGTTTTTAAAAGTCCCCCC < 41bp 0.719510066968904 0.359892815871333 0.6695167 0.15419647 prediction 0.439020133937808 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133476699 chr3:133476701 nonsynonymous SNV 0.043 3 23 hm5C_associated_SNPs_82265 0 0 8 DHX30 POSTAR2 ENCODE chr3:133476654-133476792
64251 chr1 160313209 160313209 1 + C T LUSC 160313207 + 160313187 160313227 41 ATGGCTACGGCAGGGGGTGGCTCTGGGGCTGACCCGGGAAG ATGGCTACGGCAGGGGGTGGCTTTGGGGCTGACCCGGGAAG < 41bp 0.719501923936232 0.499611078572311 0.884115 0.8333539 prediction 0.439003847872465 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160313207 chr1:160313209 nonsynonymous SNV 0.993 1 23 hm5C_associated_SNPs_82272 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:160313196-160313222
64251 chrX 152915526 152915526 1 + G T LGG 152915524 + 152915504 152915544 41 TCACTGTGGCCTACCTCATGCAGAAGCTCCACCTCTCTCTC TCACTGTGGCCTACCTCATGCATAAGCTCCACCTCTCTCTC < 41bp 0.719501352396524 0.370658789084463 0.36639482 0.018156022 prediction 0.439002704793047 Functional Loss - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152915524 chrX:152915526 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82274 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039788-ERR039789 chrX:152915522-152915543
64251 chr16 46952560 46952560 1 + G A SKCM 46952557 + 46952537 46952577 41 ACCAGGACAACGTGTACTCTCCAGATTGCAGATTCCACTCC ACCAGGACAACGTGTACTCTCCAAATTGCAGATTCCACTCC < 41bp 0.814925525348737 0.595434339853845 0.72882843 0.28270647 prediction 0.438982370989785 Functional Loss - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46952557 chr16:46952560 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_82280 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:46952542-46952582
64251 chr9 97222789 97222789 1 + C T rs111461492 97222787 + 97222767 97222807 41 GGTTTTATGAAGCTGAGTTTCACGATAAGTGTCTTGCTATT GGTTTTATGAAGCTGAGTTTCATGATAAGTGTCTTGCTATT < 41bp 0.773521185104651 0.55404307744171 0.15139735 0.1848917 prediction 0.438956215325883 Functional Loss - MFSD14B ENSG00000148110 UTR3 Human protein_coding chr9:97222787 chr9:97222789 . . 0 23 hm5C_associated_SNPs_82287 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr9:97222686-97222790
64251 chr3 9970025 9970025 1 + G A UCEC 9970022 + 9970002 9970042 41 CCAGAACCTCTGGCAAGCCGCCCGACTGCAACTGCTGACCC CCAGAACCTCTGGCAAGCCGCCCAACTGCAACTGCTGACCC < 41bp 0.719476864575263 0.487258313792109 0.26972872 0.4776956 prediction 0.438953729150526 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9970022 chr3:9970025 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_82289 0 0 5 BUD13 POSTAR2 ENCODE chr3:9969986-9970025
64251 chr10 88718556 88718556 1 + G A SKCM 88718553 + 88718533 88718573 41 ACGGAAGCAGCTGAGAAGACCAAGGAGGGGGTCATGTATGT ACGGAAGCAGCTGAGAAGACCAAAGAGGGGGTCATGTATGT < 41bp 0.779214437872935 0.559739349967283 0.7447512 0.32949436 prediction 0.438950175811304 Functional Loss - SNCG ENSG00000173267 CDS Human protein_coding chr10:88718553 chr10:88718556 synonymous SNV . 0 24 hm5C_associated_SNPs_82290 0 0 1 DGCR8 POSTAR2 ENCODE chr10:88718520-88718557
64251 chr5 172517653 172517653 1 + C T rs35768619 172517651 + 172517631 172517671 41 TTTCTGATTCCCTTTATTACCCCGATTCACTTTTCAGTGTC TTTCTGATTCCCTTTATTACCCTGATTCACTTTTCAGTGTC < 41bp 0.719470472245337 0.425247238450519 0.11926404 0.11914137 prediction 0.438940944490673 Functional Loss - CREBRF ENSG00000164463 CDS Human protein_coding chr5:172517651 chr5:172517653 synonymous SNV . 0 23 hm5C_associated_SNPs_82292 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr5:172517636-172517654
64251 chr8 42176890 42176890 1 + C T rs56105162 42176887 + 42176867 42176907 41 AAGTTGGATTTCTTCAAAACCAGCATCCAGATTGACCTGGA AAGTTGGATTTCTTCAAAACCAGTATCCAGATTGACCTGGA < 41bp 0.732379037550362 0.512910610104669 0.15075293 0.07234874 prediction 0.438936854891387 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42176887 chr8:42176890 synonymous SNV . 0 24 hm5C_associated_SNPs_82294 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221664 chr8:42176880-42176900
64251 chr17 7490231 7490231 1 + G A rs137983973 7490228 + 7490208 7490248 41 CACCCCTAGGTGTCGCTTTCCTCGCTTGCTACGGCCTGGTC CACCCCTAGGTGTCGCTTTCCTCACTTGCTACGGCCTGGTC < 41bp 0.719466455020818 0.473259096313159 0.50713915 0.14910805 prediction 0.438932910041637 Functional Loss - MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7490228 chr17:7490231 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_82295 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:7490220-7490240
64251 chr8 37986389 37986389 1 + G A UCEC 37986386 + 37986366 37986406 41 ACTACTCTTCTGGCTATGGACAGGGAGACGTCCTGGGATTT ACTACTCTTCTGGCTATGGACAGAGAGACGTCCTGGGATTT < 41bp 0.775231509518247 0.555767954893301 0.9321141 0.6651802 prediction 0.438927109249893 Functional Loss - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37986386 chr8:37986389 nonsynonymous SNV 0.395 4 24 hm5C_associated_SNPs_82297 0 0 3 LIN28B POSTAR2 ENCODE chr8:37986386-37986452
64251 chr9 131262354 131262354 1 + C T rs542069980 131262352 + 131262332 131262372 41 TTTCTCCTCGTTAGGCGGACCGCCGCTACCAGAGCCGGCTG TTTCTCCTCGTTAGGCGGACCGTCGCTACCAGAGCCGGCTG < 41bp 0.719463108638996 0.470534992446938 0.058049917 0.041498393 prediction 0.438926217277991 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262352 chr9:131262354 synonymous SNV . 0 23 hm5C_associated_SNPs_82298 0 0 1 BUD13 POSTAR2 ENCODE chr9:131262338-131262387
64251 chr15 69706758 69706758 1 + A C rs73426054 69706754 + 69706734 69706774 41 TCCTAACGTCCCGCAGTCTTCGCCAGCCAGCCGTCCCGCAT TCCTAACGTCCCGCAGTCTTCGCCCGCCAGCCGTCCCGCAT < 41bp 0.863060623349138 0.643605155564078 0.25672472 0.08557165 prediction 0.438910935570121 Functional Loss - LOC145694 ENSG00000259426 ncRNA_exonic Human antisense chr15:69706754 chr15:69706758 . . 0 25 hm5C_associated_SNPs_82306 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:69706757-69706758
64251 chr2 241516115 241516115 1 + C T STAD 241516112 + 241516092 241516132 41 TCGGCCAGCGCCATTGACATCTCCAAGTGGAGGACCTTCCA TCGGCCAGCGCCATTGACATCTCTAAGTGGAGGACCTTCCA < 41bp 0.755411514135413 0.535960420383208 0.95409405 0.9047107 prediction 0.43890218750441 Functional Loss - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241516112 chr2:241516115 synonymous SNV . 0 24 hm5C_associated_SNPs_82308 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:241516101-241516121
64251 chr22 46663952 46663952 1 + C T rs533037119 46663950 + 46663930 46663970 41 GCGCAACATGGCCGCAGCCTCGCCTCTGCGCGACTGCCAGG GCGCAACATGGCCGCAGCCTCGTCTCTGCGCGACTGCCAGG < 41bp 0.744328303477561 0.524878068897583 0.13529679 0.14911196 prediction 0.438900469159957 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46663950 chr22:46663952 nonsynonymous SNV 0.009 0 23 hm5C_associated_SNPs_82310 0 0 3 DDX3X POSTAR2 ENCODE chr22:46663936-46663971
64251 chr17 7467090 7467090 1 + C T COAD 7467088 + 7467068 7467108 41 ACTCAGGTGGACTCCAAAGTCTCCTCTGGACCCTGACTCGG ACTCAGGTGGACTCCAAAGTCTTCTCTGGACCCTGACTCGG < 41bp 0.719441427631842 0.460378389854836 0.15659165 0.21301386 prediction 0.438882855263683 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7467088 chr17:7467090 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82314 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7467054-7467092
64251 chr2 27435207 27435207 1 + G T SARC 27435204 + 27435184 27435224 41 GCGGGGCCGCGGGGCCGGGTCGCGCGAGCAGCGGAGCACCA GCGGGGCCGCGGGGCCGGGTCGCTCGAGCAGCGGAGCACCA < 41bp 0.925244730972247 0.705810118744862 0.4185591 0.28153944 prediction 0.43886922445477 Functional Loss - ATRAID ENSG00000138085 CDS Human protein_coding chr2:27435204 chr2:27435207 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_82317 0 0 4 DGCR8 POSTAR2 ENCODE chr2:27435173-27435225
64251 chr1 93646302 93646302 1 + G A SKCM 93646299 + 93646279 93646319 41 GCGGTTCGAATTCTGTGCTGCCGGGGTTCGCTGGTTCTCCG GCGGTTCGAATTCTGTGCTGCCGAGGTTCGCTGGTTCTCCG < 41bp 0.759354571592452 0.539923956983016 0.90989286 0.6907718 prediction 0.438861229218871 Functional Loss - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93646299 chr1:93646302 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_82318 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:93646291-93646322
64251 chr9 96407975 96407975 1 + G A CESC 96407972 + 96407952 96407992 41 CGCTGGGCTACATGGAGGAGCACGGCTTCACCGAGCCCATC CGCTGGGCTACATGGAGGAGCACAGCTTCACCGAGCCCATC < 41bp 0.719430592862629 0.464371434021941 0.3647884 0.1419118 prediction 0.438861185725257 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96407972 chr9:96407975 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_82319 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:96407966-96408004
64251 chr22 30823268 30823268 1 + C T UCEC 30823266 + 30823246 30823286 41 TTCCGGGCTTCACCATCAACCGCGTGTGTGCTGCCTCTCTC TTCCGGGCTTCACCATCAACCGTGTGTGTGCTGCCTCTCTC < 41bp 0.839007426511469 0.619578107170678 0.8831158 0.88003147 prediction 0.438858638681582 Functional Loss - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30823266 chr22:30823268 synonymous SNV . 0 23 hm5C_associated_SNPs_82321 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr22:30823239-30823273
64251 chr8 21959726 21959726 1 + G A rs113817175 21959723 + 21959703 21959743 41 GCAGGTGACCTCGGTCCTGTCCCGGCTTGCCCTCTTCCCCC GCAGGTGACCTCGGTCCTGTCCCAGCTTGCCCTCTTCCCCC < 41bp 0.719426136769458 0.462267400679072 0.4212627 0.22441429 prediction 0.438852273538916 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21959723 chr8:21959726 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_82324 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:21959721-21959757
64251 chr8 22442859 22442859 1 + G A SKCM 22442856 + 22442836 22442876 41 TCCAGAGTCTGGCATGTTCCCCGGGCCTCCCCGCTGCTGAC TCCAGAGTCTGGCATGTTCCCCGAGCCTCCCCGCTGCTGAC < 41bp 0.719423611478285 0.457245659890187 0.9305098 0.5981852 prediction 0.43884722295657 Functional Loss - PDLIM2 ENSG00000120913 CDS Human protein_coding chr8:22442856 chr8:22442859 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_82326 0 0 1 BUD13 POSTAR2 ENCODE chr8:22442836-22442888
64251 chrX 110980098 110980098 1 + G A CESC 110980095 + 110980075 110980115 41 TCTTTGTATCTCCACCTACACACGGCAGGCCAGGTAGGTTA TCTTTGTATCTCCACCTACACACAGCAGGCCAGGTAGGTTA < 41bp 0.719420497080597 0.496389782082007 0.028667301 0.0044761 prediction 0.438840994161193 Functional Loss - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110980095 chrX:110980098 nonsynonymous SNV 0.690 2 24 hm5C_associated_SNPs_82328 0 0 1 DDX24 POSTAR2 ENCODE chrX:110980082-110980106
64251 chr12 69127245 69127245 1 + C T rs34342902 69127243 + 69127223 69127263 41 TTTTCACAGCATCAAAAAAGCACGAAGCTGCAAAAGAAGTA TTTTCACAGCATCAAAAAAGCATGAAGCTGCAAAAGAAGTA < 41bp 0.719419251286134 0.43121854451545 0.15956089 0.17527685 prediction 0.438838502572268 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69127243 chr12:69127245 synonymous SNV . 0 23 hm5C_associated_SNPs_82329 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69127245-69127283
64251 chr2 27249394 27249394 1 + G A rs560593669 27249391 + 27249371 27249411 41 GGCCGGAAAGCAGGCAGAAGCCCGTCCTGGGTGGTGCTGGC GGCCGGAAAGCAGGCAGAAGCCCATCCTGGGTGGTGCTGGC < 41bp 0.719415496120002 0.482577070853593 0.8710541 0.51871574 prediction 0.438830992240004 Functional Loss - MAPRE3 ENSG00000084764 UTR3 Human protein_coding chr2:27249391 chr2:27249394 . . 0 24 hm5C_associated_SNPs_82332 0 0 4 AKAP8L POSTAR2 ENCODE chr2:27249307-27249402
64251 chr14 24113644 24113644 1 + G A UCEC 24113641 + 24113621 24113661 41 CTGGGTGTCTACAATGTCAGCAAGACAGCGCTGCTGGGTCT CTGGGTGTCTACAATGTCAGCAAAACAGCGCTGCTGGGTCT < 41bp 0.787124522161487 0.567716820338253 0.882585 0.78745306 prediction 0.438815403646468 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113641 chr14:24113644 synonymous SNV . 0 24 hm5C_associated_SNPs_82333 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:24113633-24113667
64251 chr3 9781178 9781178 1 + G T LUAD 9781175 + 9781155 9781195 41 CCTGAGGTCTGCTTCGCCAACACGGTCTTCCTAGAGCCTAT CCTGAGGTCTGCTTCGCCAACACTGTCTTCCTAGAGCCTAT < 41bp 0.719405335848725 0.309783539980888 0.122657865 0.030911177 prediction 0.43881067169745 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9781175 chr3:9781178 synonymous SNV . 0 24 hm5C_associated_SNPs_82334 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr3:9781170-9781187
64251 chr19 54377408 54377408 1 + G T LUAD 54377406 + 54377386 54377426 41 GGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCA GGCCCTGGAGTGGTGCGTGGCGTTGTACGCCATCTGCTTCA < 41bp 0.719404645591442 0.358101741606917 0.69322515 0.36465007 prediction 0.438809291182884 Functional Loss - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377406 chr19:54377408 nonsynonymous SNV 0.893 3 23 hm5C_associated_SNPs_82335 0 0 8 RBM15 POSTAR2 ENCODE chr19:54377388-54377417
64251 chr3 184571699 184571699 1 + G T UCEC 184571696 + 184571676 184571716 41 AGATGTCTGTTCAGTGGTTCCAAGGGTGAAGTCTGCTGTAT AGATGTCTGTTCAGTGGTTCCAATGGTGAAGTCTGCTGTAT < 41bp 0.71940044519272 0.341003333855551 0.901312 0.6182695 prediction 0.438800890385439 Functional Loss - VPS8 ENSG00000156931 CDS Human protein_coding chr3:184571696 chr3:184571699 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_82337 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr3:184571675-184571713
64251 chr16 4744977 4744977 1 + G A SKCM 4744974 + 4744954 4744994 41 CGCAGGTGCTGGGCCTCGTGCGGGTCCCGCTGTACACCCAG CGCAGGTGCTGGGCCTCGTGCGGATCCCGCTGTACACCCAG < 41bp 0.811625464060982 0.592230859592259 0.88574654 0.77485174 prediction 0.438789208937445 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4744974 chr16:4744977 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_82345 0 0 3 BUD13 POSTAR2 ENCODE chr16:4744953-4744995
64251 chr19 34984483 34984483 1 + C T COAD 34984480 + 34984460 34984500 41 TGCCTGGACGGGGTTCCCTTCACCGTGGACGTGGAGAACAA TGCCTGGACGGGGTTCCCTTCACTGTGGACGTGGAGAACAA < 41bp 0.72286498321325 0.503472543214449 0.09940785 0.04150173 prediction 0.438784879997604 Functional Loss - WTIP ENSG00000142279 CDS Human protein_coding chr19:34984480 chr19:34984483 synonymous SNV . 0 24 hm5C_associated_SNPs_82347 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:34984454-34984492
64251 chr7 129710498 129710498 1 + G A SKCM 129710495 + 129710475 129710515 41 TAGCGGGTCATGTCGGCCGCCCAGGGCTGGGACAGGAACCG TAGCGGGTCATGTCGGCCGCCCAAGGCTGGGACAGGAACCG < 41bp 0.719390522059813 0.486908681913703 0.5577974 0.53561836 prediction 0.438781044119627 Functional Loss - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129710495 chr7:129710498 synonymous SNV . 0 24 hm5C_associated_SNPs_82348 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129710474-129710510
64251 chr20 23334948 23334948 1 + G A COAD 23334945 + 23334925 23334965 41 GAAGCCACACCAAGCCAGACCACGGTCCTTGTTGTCATCTG GAAGCCACACCAAGCCAGACCACAGTCCTTGTTGTCATCTG < 41bp 0.719389036108856 0.483355789891419 0.109428495 0.08039501 prediction 0.438778072217711 Functional Loss - NXT1 ENSG00000132661 CDS Human protein_coding chr20:23334945 chr20:23334948 synonymous SNV . 0 24 hm5C_associated_SNPs_82350 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:23334940-23334960
64251 chr20 23334947 23334947 1 + C T UCEC 23334945 + 23334925 23334965 41 GAAGCCACACCAAGCCAGACCACGGTCCTTGTTGTCATCTG GAAGCCACACCAAGCCAGACCATGGTCCTTGTTGTCATCTG < 41bp 0.719389036108856 0.458481049814234 0.109428495 0.092699826 prediction 0.438778072217711 Functional Loss - NXT1 ENSG00000132661 CDS Human protein_coding chr20:23334945 chr20:23334947 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_82351 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:23334940-23334960
64251 chr12 72290500 72290500 1 + T C LUAD 72290499 + 72290479 72290519 41 AGCAAGCATGGAAATTTCTTCTGGGTTATTTTCCCTGGGAC AGCAAGCATGGAAATTTCTTCCGGGTTATTTTCCCTGGGAC < 41bp 0.794649827854949 0.575262561360777 0.88371706 0.8888577 prediction 0.438774532988344 Functional Loss - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72290499 chr12:72290500 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_82352 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr12:72290476-72290521
64251 chr19 50119297 50119297 1 + C T rs201889627 50119295 + 50119275 50119315 41 CGGCCAGAGCGGAGTCTCGCCACGGGACAACCTGCCACATC CGGCCAGAGCGGAGTCTCGCCATGGGACAACCTGCCACATC < 41bp 0.719383870120835 0.471452371405263 0.8605351 0.8710959 prediction 0.43876774024167 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50119295 chr19:50119297 nonsynonymous SNV 0.010 1 23 hm5C_associated_SNPs_82353 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:50119297-50119298
64251 chr16 90110296 90110296 1 + G A UCEC 90110293 + 90110273 90110313 41 AGCCAGCGTGCGGGAACGGGCAGGCAGCCTCCCGCTGCCAG AGCCAGCGTGCGGGAACGGGCAGACAGCCTCCCGCTGCCAG < 41bp 0.797089939818036 0.577712777006245 0.82856596 0.26450872 prediction 0.438754325623582 Functional Loss - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90110293 chr16:90110296 . . 0 24 hm5C_associated_SNPs_82359 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:90110288-90110326
64251 chr2 120005569 120005569 1 + C T rs17805141 120005567 + 120005547 120005587 41 TGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCCGGCGTG TGGCCTACGTGCTGCTGTCACTTGTGTACTTGCCCGGCGTG < 41bp 0.840151325533139 0.620778300401689 0.29418108 0.4901746 prediction 0.438746050262899 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005567 chr2:120005569 synonymous SNV . 0 23 hm5C_associated_SNPs_82364 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:120005560-120005580
64251 chrX 84526800 84526800 1 + A C UCEC 84526796 + 84526776 84526816 41 GAAGACCATCAGAAAAAAATCAGCATATTATGAGGCACCAC GAAGACCATCAGAAAAAAATCAGCCTATTATGAGGCACCAC < 41bp 0.719372159668463 0.313905242236167 0.7955489 0.67351925 prediction 0.438744319336926 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84526796 chrX:84526800 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_82365 0 0 20 FMR1 POSTAR2 GSE39682,GSM977615 chrX:84525519-84526836
64251 chrX 84526798 84526798 1 + G T UCEC 84526796 + 84526776 84526816 41 GAAGACCATCAGAAAAAAATCAGCATATTATGAGGCACCAC GAAGACCATCAGAAAAAAATCATCATATTATGAGGCACCAC < 41bp 0.719372159668463 0.39964547859633 0.7955489 0.46578223 prediction 0.438744319336926 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84526796 chrX:84526798 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_82366 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chrX:84525519-84526836
64251 chr11 47259499 47259499 1 + T C UCEC 47259498 + 47259478 47259518 41 ATCGACGTGTTCGATGGAAACTCAGGGAAGATGATGTGTCA ATCGACGTGTTCGATGGAAACCCAGGGAAGATGATGTGTCA < 41bp 0.719371646557475 0.459696240464183 0.3290511 0.41166192 prediction 0.43874329311495 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47259498 chr11:47259499 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_82367 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:47259455-47259499
64251 chr21 47402577 47402577 1 + G A BLCA 47402574 + 47402554 47402594 41 CCGTGGACCTGTTCTTTGTGCTGGACACCTCTGAGAGCGTG CCGTGGACCTGTTCTTTGTGCTGAACACCTCTGAGAGCGTG < 41bp 0.780022316834021 0.560652316384594 0.08262977 0.029648215 prediction 0.438740000898855 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47402574 chr21:47402577 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_82369 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:47402560-47402580
64251 chr11 124857872 124857872 1 + G A SARC 124857869 + 124857849 124857889 41 TTCTACCCATATGTCAGGACCAGGATTTTCTACCCAGAGAC TTCTACCCATATGTCAGGACCAGAATTTTCTACCCAGAGAC < 41bp 0.766405774369487 0.547039420658577 0.39474306 0.23992094 prediction 0.438732707421819 Functional Loss - CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124857869 chr11:124857872 nonsynonymous SNV 0.081 1 24 hm5C_associated_SNPs_82372 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:124857860-124857880
64251 chr11 65819873 65819873 1 + C T BRCA 65819871 + 65819851 65819891 41 CTAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAA CTAAGATGGCGACGGAGCATCCTGAGCCTCCCAAAGCAGAA < 41bp 0.783040603374461 0.563679366072128 0.12485278 0.12228429 prediction 0.438722474604667 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65819871 chr11:65819873 synonymous SNV . 0 23 hm5C_associated_SNPs_82375 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65819840-65819880
64251 chr15 75942805 75942805 1 + G A SKCM 75942802 + 75942782 75942822 41 GGCCGTACCTATGAAGCCATCGGGGAGATGTTTGCTGAGCA GGCCGTACCTATGAAGCCATCGGAGAGATGTTTGCTGAGCA < 41bp 0.78998593645654 0.570628866581035 0.94517255 0.9303516 prediction 0.43871413975101 Functional Loss - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75942802 chr15:75942805 synonymous SNV . 0 24 hm5C_associated_SNPs_82377 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:75942802-75942834
64251 chr15 42694998 42694998 1 + G A rs150226817 42694995 + 42694975 42695015 41 CTCTCCCCATCTCTCAGATGCACGGGAACAAGCAGCACCTG CTCTCCCCATCTCTCAGATGCACAGGAACAAGCAGCACCTG < 41bp 0.767663533787942 0.548310625467919 0.111563325 0.099024504 prediction 0.438705816640047 Functional Loss - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42694995 chr15:42694998 nonsynonymous SNV 0.845 4 24 hm5C_associated_SNPs_82381 1 0 1 SF3B4 POSTAR2 ENCODE chr15:42694916-42695022
64251 chr14 39650026 39650026 1 + G C OV 39650022 + 39650002 39650042 41 GGTTAAGATGGAGGAGGAAACTGAGGTAAGGGAAAGTGAGA GGTTAAGATGGAGGAGGAAACTGACGTAAGGGAAAGTGAGA < 41bp 0.84129433342282 0.621943638533694 0.8713545 0.40904343 prediction 0.438701389778252 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39650022 chr14:39650026 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_82382 0 0 42 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39649980-39650040
64251 chr16 30012758 30012758 1 + A C rs4389160 30012754 + 30012734 30012774 41 GCTGGCCTCCTCCCGCTACCCCCCATTCCCTTCTGACTACC GCTGGCCTCCTCCCGCTACCCCCCCTTCCCTTCTGACTACC < 41bp 0.719342464793769 0.29529427546169 0.028236806 0.015285939 prediction 0.438684929587537 Functional Loss - INO80E ENSG00000169592 CDS Human protein_coding chr16:30012754 chr16:30012758 synonymous SNV . 0 25 hm5C_associated_SNPs_82384 0 0 9 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:30012748-30012768
64251 chr6 168370482 168370482 1 + G A UCEC 168370479 + 168370459 168370499 41 CAGCCAAGATGCAGATTCACCTGGAAGTTCTGGGGCCCCTG CAGCCAAGATGCAGATTCACCTGAAAGTTCTGGGGCCCCTG < 41bp 0.719337424030307 0.489685864746024 0.37956834 0.06806013 prediction 0.438674848060614 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168370479 chr6:168370482 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_82387 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:168370472-168370509
64251 chr6 109294619 109294619 1 + C T SKCM 109294616 + 109294596 109294636 41 ACCTAAAAAACTATCACAAACTCCATTGGGAAACAGAATTC ACCTAAAAAACTATCACAAACTCTATTGGGAAACAGAATTC < 41bp 0.747940555923192 0.528607749899714 0.9359069 0.3454012 prediction 0.438665612046956 Functional Loss - ARMC2 ENSG00000118690 CDS Human protein_coding chr6:109294616 chr6:109294619 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_82390 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:109294595-109294622
64251 chr2 30457355 30457355 1 + G A SKCM 30457352 + 30457332 30457372 41 GAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTACCA GAGATCGGCCTCAGCCCCCGCAAAGATGGCCTTTCCTACCA < 41bp 0.800757538521581 0.581426023898693 0.84344494 0.3757828 prediction 0.438663029245775 Functional Loss - LBH ENSG00000213626 CDS Human protein_coding chr2:30457352 chr2:30457355 synonymous SNV . 0 24 hm5C_associated_SNPs_82391 0 0 1 METAP2 POSTAR2 ENCODE chr2:30457288-30457360
64251 chr12 109541352 109541352 1 + C T UCEC 109541350 + 109541330 109541370 41 GTGTCCTGGCTAAATCAGAACTCGAATGGCCTTGTTTTCTT GTGTCCTGGCTAAATCAGAACTTGAATGGCCTTGTTTTCTT < 41bp 0.870517105217357 0.651186216831242 0.9026579 0.16133568 prediction 0.43866177677223 Functional Loss - UNG ENSG00000076248 CDS Human protein_coding chr12:109541350 chr12:109541352 nonsynonymous SNV 0.505 0 23 hm5C_associated_SNPs_82392 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:109541283-109541356
64251 chr6 116600453 116600453 1 - C T rs3749894 116600456 - 116600436 116600476 41 CTGAGGTGGTGAAGGAAGGCCTGGCGGAGAAGGAGGTAATG CTGAGGTGGTGAAGGAAGGCCTGACGGAGAAGGAGGTAATG < 41bp 0.719330877010245 0.473532813147661 0.36585623 0.26723766 prediction 0.43866175402049 Functional Loss - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600456 chr6:116600453 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_82393 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:116600426-116600465
64251 chr11 57243663 57243663 1 + T C PRAD 57243662 + 57243642 57243682 41 TGTTCGCGGACCTGGCCAACCTGAGCCACCTCTTCCTCCAC TGTTCGCGGACCTGGCCAACCCGAGCCACCTCTTCCTCCAC < 41bp 0.719329704288225 0.485487298009861 0.57754046 0.67098486 prediction 0.438659408576449 Functional Loss - RTN4RL2 ENSG00000186907 CDS Human protein_coding chr11:57243662 chr11:57243663 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_82396 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57243656-57243689
64251 chr17 28770986 28770986 1 + G A BLCA 28770983 + 28770963 28771003 41 TTATAAAATCACAGCATCTGCTCGAGGGTGAGTGACTGAAT TTATAAAATCACAGCATCTGCTCAAGGGTGAGTGACTGAAT < 41bp 0.748238733529174 0.528910046911097 0.049565703 0.028838009 prediction 0.438657373236154 Functional Loss - CPD ENSG00000108582 CDS Human protein_coding chr17:28770983 chr17:28770986 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_82397 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:28770955-28770986
64251 chr17 15609718 15609718 1 + G T GBM 15609715 + 15609695 15609735 41 TTTTAGGAAACAGTGACATTCAAGGATGTGGCCATGGACTT TTTTAGGAAACAGTGACATTCAATGATGTGGCCATGGACTT < 41bp 0.719321018854911 0.326574279323184 0.75290954 0.13520542 prediction 0.438642037709823 Functional Loss - ZNF286A ENSG00000187607;ENSG00000255104 CDS Human other chr17:15609715 chr17:15609718 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82404 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:15609700-15609720
64251 chr2 233925301 233925301 1 + G A HNSC 233925298 + 233925278 233925318 41 GCGTGCCAGCGAGTCCATCTCCCGGGCATACGCGCTCTGCG GCGTGCCAGCGAGTCCATCTCCCAGGCATACGCGCTCTGCG < 41bp 0.719320710223044 0.465942937862594 0.734601 0.26177177 prediction 0.438641420446088 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:233925298 chr2:233925301 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_82405 0 0 1 PPIG POSTAR2 ENCODE chr2:233925291-233925323
64251 chr10 105172904 105172904 1 + G A STAD 105172901 + 105172881 105172921 41 CTGCATCCTTTGCGTCCATCCTCGAACCAGAGTTGTGCACC CTGCATCCTTTGCGTCCATCCTCAAACCAGAGTTGTGCACC < 41bp 0.796330162477071 0.57701061142982 0.89052135 0.37105685 prediction 0.438639102094502 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172901 chr10:105172904 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_82406 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:105172888-105172926
64251 chr13 22276041 22276041 1 + C T rs79892141 22276039 + 22276019 22276059 41 GGATTCTGGCTGGTGGCCTGCGCGAGGGTGCAGTCTTACTT GGATTCTGGCTGGTGGCCTGCGTGAGGGTGCAGTCTTACTT < 41bp 0.814165953309498 0.594848962061202 0.7001528 0.745586 prediction 0.438633982496593 Functional Loss - FGF9 ENSG00000102678 UTR3 Human protein_coding chr13:22276039 chr13:22276041 . . 0 23 hm5C_associated_SNPs_82408 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr13:22276004-22276051
64251 chr16 19087089 19087089 1 + C T CESC 19087086 + 19087066 19087106 41 AAGGAAGGTGCCATGGCCTGCACCGTGGCGGTGGAAGAGAG AAGGAAGGTGCCATGGCCTGCACTGTGGCGGTGGAAGAGAG < 41bp 0.719313938605854 0.491516972499484 0.15408608 0.083553195 prediction 0.438627877211709 Functional Loss - COQ7 ENSG00000167186 CDS Human protein_coding chr16:19087086 chr16:19087089 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_82409 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr16:19087072-19087099
64251 chr10 72498695 72498695 1 + G A STAD 72498692 + 72498672 72498712 41 GACCAAGTTTGGGTCATGTTCGCGGTCATGTGGGGGCGGGG GACCAAGTTTGGGTCATGTTCGCAGTCATGTGGGGGCGGGG < 41bp 0.815167056938316 0.595860007540669 0.9056783 0.7941017 prediction 0.438614098795293 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72498692 chr10:72498695 nonsynonymous SNV 0.676 4 24 hm5C_associated_SNPs_82413 0 0 6 DDX24 POSTAR2 ENCODE chr10:72498687-72498739
64251 chr19 52793634 52793634 1 + G T LUSC 52793632 + 52793612 52793652 41 AATGAGCAGGGCAAAGTCTTCAGAGTGTCTTCAAGCCTTCC AATGAGCAGGGCAAAGTCTTCATAGTGTCTTCAAGCCTTCC < 41bp 0.719302800034042 0.387906322656845 0.6974055 0.10815355 prediction 0.438605600068084 Functional Loss - ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793632 chr19:52793634 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_82414 0 0 1 SF3B1 POSTAR2 ENCODE chr19:52793633-52793643
64251 chr16 4744970 4744970 1 + C T HNSC 4744968 + 4744948 4744988 41 TGTCTGCGCAGGTGCTGGGCCTCGTGCGGGTCCCGCTGTAC TGTCTGCGCAGGTGCTGGGCCTTGTGCGGGTCCCGCTGTAC < 41bp 0.719302688475011 0.476155789122022 0.524879 0.5050404 prediction 0.438605376950023 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4744968 chr16:4744970 nonsynonymous SNV 0.958 0 23 hm5C_associated_SNPs_82415 0 0 3 BUD13 POSTAR2 ENCODE chr16:4744953-4744995
64251 chr12 124104003 124104003 1 + G A UCEC 124104000 + 124103980 124104020 41 TCTTGATTTTGCCAGCCTTGCTCGAGGTTTTGCCCTGCTGA TCTTGATTTTGCCAGCCTTGCTCAAGGTTTTGCCCTGCTGA < 41bp 0.793732817043318 0.574435987062894 0.17625651 0.3098855 prediction 0.438593659960848 Functional Loss - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124104000 chr12:124104003 nonsynonymous SNV 0.948 0 24 hm5C_associated_SNPs_82416 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124103985-124104019
64251 chr2 176973703 176973703 1 + G A BLCA 176973700 + 176973680 176973720 41 ACCAGATCCGCGAACTGGAACGCGAGTTTTTCTTTAACGTG ACCAGATCCGCGAACTGGAACGCAAGTTTTTCTTTAACGTG < 41bp 0.719288947545659 0.487114078038955 0.1884416 0.074929 prediction 0.438577895091318 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973700 chr2:176973703 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82423 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176973620-176973720
64251 chr5 159476549 159476549 1 + G A LGG 159476546 + 159476526 159476566 41 CAATTAAACCCCAGCTATATCAGGGCAATATTGAGGAGAGC CAATTAAACCCCAGCTATATCAGAGCAATATTGAGGAGAGC < 41bp 0.760101335541583 0.540817655009777 0.92403543 0.9006338 prediction 0.438567361063612 Functional Loss - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159476546 chr5:159476549 synonymous SNV . 0 24 hm5C_associated_SNPs_82427 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:159476520-159476558
64251 chr2 239007605 239007605 1 + C T rs376131894 239007603 + 239007583 239007623 41 TGGCCTCAGTGCACAGTGGCCCCCAGCCTCGGCCAGGCCTG TGGCCTCAGTGCACAGTGGCCCTCAGCCTCGGCCAGGCCTG < 41bp 0.745794407791915 0.526513111315892 0.15394396 0.1122123 prediction 0.438562592952045 Functional Loss - UBE2F-SCLY ENSG00000132330;ENSG00000258984 UTR3 Human other chr2:239007603 chr2:239007605 . . 0 23 hm5C_associated_SNPs_82429 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163974 chr2:239007604-239007605
64251 chr13 52602505 52602505 1 + G T LUAD 52602503 + 52602483 52602523 41 AATTATCCTTGCACACAATTCGGGGGGCCCAAAGCTTGACA AATTATCCTTGCACACAATTCGTGGGGCCCAAAGCTTGACA < 41bp 0.77898867763507 0.559709824722028 0.92051846 0.19059253 prediction 0.438557705826086 Functional Loss - ALG11 ENSG00000253710 CDS Human protein_coding chr13:52602503 chr13:52602505 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_82430 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chr13:52602479-52602509
64251 chr5 94024258 94024258 1 + T C HNSC 94024257 + 94024237 94024277 41 GAAAACTGGTGTGCTTGGGTCTGGAAAGATTCAGGTGTCAA GAAAACTGGTGTGCTTGGGTCCGGAAAGATTCAGGTGTCAA < 41bp 0.795529025804863 0.576262015041956 0.110881716 0.1760763 prediction 0.438534021525814 Functional Loss - SLF1 ENSG00000133302 CDS Human protein_coding chr5:94024257 chr5:94024258 synonymous SNV . 0 22 hm5C_associated_SNPs_82439 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:94024240-94024259
64251 chr20 25428660 25428660 1 + G A rs193082167 25428657 + 25428637 25428677 41 CATGCCTGTAGTCACAGTTACACGGCAGGCTGAGGTGGGAG CATGCCTGTAGTCACAGTTACACAGCAGGCTGAGGTGGGAG < 41bp 0.786087799303265 0.566821178619329 0.21043813 0.18428999 prediction 0.438533241367873 Functional Loss - GINS1 ENSG00000101003 UTR3 Human protein_coding chr20:25428657 chr20:25428660 . . 0 24 hm5C_associated_SNPs_82440 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:25428653-25428673
64251 chr10 14941650 14941650 1 + G A UCEC 14941647 + 14941627 14941667 41 TGAATTCACAGTGGATGCGGCTCGATACGGCAATGTGTCTC TGAATTCACAGTGGATGCGGCTCAATACGGCAATGTGTCTC < 41bp 0.737012661738467 0.51774862897329 0.06713343 0.25209495 prediction 0.438528065530353 Functional Loss - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14941647 chr10:14941650 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_82444 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr10:14941559-14941650
64251 chr19 48253514 48253514 1 + G A CESC 48253511 + 48253491 48253531 41 CTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCC CTTCGGGTTGACCTCATCCTCGAAAACACATCCAAAGTCCC < 41bp 0.786217290999047 0.566958486995757 0.43405154 0.0890612 prediction 0.438517608006581 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48253511 chr19:48253514 synonymous SNV . 0 24 hm5C_associated_SNPs_82450 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:48253482-48253516
64251 chr11 65408900 65408900 1 + G A LUAD 65408897 + 65408877 65408917 41 CACCTGGCTTTGTGTGTGAGCTCGGGGGTGAGGGTGAGCTA CACCTGGCTTTGTGTGTGAGCTCAGGGGTGAGGGTGAGCTA < 41bp 0.796031152140174 0.576780216449059 0.35748547 0.26643947 prediction 0.438501871382231 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408897 chr11:65408900 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_82454 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65408890-65408933
64251 chr18 8784097 8784097 1 + G T LUAD 8784093 + 8784073 8784113 41 AGAGGGTGCAAGTCCTGGTGCCGGGGGTGGGGCCCCCCTGC AGAGGGTGCAAGTCCTGGTGCCGGTGGTGGGGCCCCCCTGC < 41bp 0.74657277174371 0.527330300521133 0.91592103 0.8372104 prediction 0.438484942445155 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784093 chr18:8784097 synonymous SNV . 0 25 hm5C_associated_SNPs_82461 0 0 4 DDX24 POSTAR2 ENCODE chr18:8784083-8784118
64251 chr10 81113493 81113493 1 + C T COAD 81113491 + 81113471 81113511 41 GCAAGCATGTTGTGTTCGGTCACGTCAAAGAGGGCATGGAC GCAAGCATGTTGTGTTCGGTCATGTCAAAGAGGGCATGGAC < 41bp 0.719238569972495 0.450676227113814 0.10935041 0.10638073 prediction 0.438477139944991 Functional Loss - PPIF ENSG00000108179 CDS Human protein_coding chr10:81113491 chr10:81113493 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_82466 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:81113468-81113625
64251 chr2 10443298 10443298 1 + G A rs114933097 10443295 + 10443275 10443315 41 CCGGCGGACCGCGTCCTGCGCCGGAGCAGGTAGGGAAGGGG CCGGCGGACCGCGTCCTGCGCCGAAGCAGGTAGGGAAGGGG < 41bp 0.784174640727328 0.564937818056622 0.8347914 0.3839342 prediction 0.438473645341412 Functional Loss - HPCAL1 ENSG00000115756 UTR5 Human protein_coding chr2:10443295 chr2:10443298 . . 0 24 hm5C_associated_SNPs_82469 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr2:10443258-10443298
64251 chr11 35211479 35211479 1 + G A LUAD 35211476 + 35211456 35211496 41 AGCAACCCTACTGATGATGACGTGAGCAGCGGCTCCTCCAG AGCAACCCTACTGATGATGACGTAAGCAGCGGCTCCTCCAG < 41bp 0.719225893051802 0.481460660091348 0.42504102 0.18280211 prediction 0.438451786103605 Functional Loss - CD44 ENSG00000026508 CDS Human protein_coding chr11:35211476 chr11:35211479 synonymous SNV . 0 24 hm5C_associated_SNPs_82477 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:35211460-35211480
64251 chr5 149931403 149931403 1 + G A SKCM 149931400 + 149931380 149931420 41 AAAGCAAGGGCCGGAAATATCCCGAGATGGACTTGGATGTA AAAGCAAGGGCCGGAAATATCCCAAGATGGACTTGGATGTA < 41bp 0.786806687227073 0.567586553278229 0.25007525 0.089196116 prediction 0.438440267897689 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149931400 chr5:149931403 nonsynonymous SNV 0.953 1 24 hm5C_associated_SNPs_82481 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:149931401-149931432
64251 chr14 103801341 103801341 1 + G A rs562348995 103801338 + 103801318 103801358 41 CCCCTCCTTCGCGGAGCTGCCCGGTTCGCCAGCCCCCGCGG CCCCTCCTTCGCGGAGCTGCCCGATTCGCCAGCCCCCGCGG < 41bp 0.758995785384659 0.539777700262911 0.4603756 0.06666303 prediction 0.438436170243495 Functional Loss - EIF5 ENSG00000100664 UTR5 Human protein_coding chr14:103801338 chr14:103801341 . . 0 24 hm5C_associated_SNPs_82482 0 0 1 XRN2 POSTAR2 ENCODE chr14:103801304-103801403
64251 chr1 43825052 43825052 1 + C T CESC 43825050 + 43825030 43825070 41 ATCCCACAGCGCCGGCAGGACTCCGGGCCGAACTCCTGGTC ATCCCACAGCGCCGGCAGGACTTCGGGCCGAACTCCTGGTC < 41bp 0.821710105227247 0.60249356733076 0.72334236 0.49518198 prediction 0.438433075792973 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43825050 chr1:43825052 nonsynonymous SNV 0.829 2 23 hm5C_associated_SNPs_82486 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:43825029-43825053
64251 chr16 67575911 67575911 1 + G A COAD 67575908 + 67575888 67575928 41 CTAGGCCCCTGGTGCAGCAGCCCGAGCCCCTTCCCATCCAA CTAGGCCCCTGGTGCAGCAGCCCAAGCCCCTTCCCATCCAA < 41bp 0.719215655356916 0.462837026398361 0.54158956 0.30962506 prediction 0.438431310713831 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575908 chr16:67575911 nonsynonymous SNV 0.395 1 24 hm5C_associated_SNPs_82487 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr16:67575911-67575935
64251 chr16 28905901 28905901 1 + C T UCEC 28905898 + 28905878 28905918 41 CTGGCCACCATCTGTGCCCTCTGCAATGACTCCTCCTTGGA CTGGCCACCATCTGTGCCCTCTGTAATGACTCCTCCTTGGA < 41bp 0.739372073367164 0.520162550076883 0.5079605 0.20846257 prediction 0.438419046580563 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28905898 chr16:28905901 synonymous SNV . 0 24 hm5C_associated_SNPs_82493 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:28905901-28905902
64251 chr6 106987327 106987327 1 + G A LUSC 106987324 + 106987304 106987344 41 TTCAGGGTGTTCCTTTCATCCTGGAACCTGGTGAATACCCT TTCAGGGTGTTCCTTTCATCCTGAAACCTGGTGAATACCCT < 41bp 0.752002544719883 0.532793148764112 0.3389008 0.21156922 prediction 0.438418791911542 Functional Loss - CRYBG1 ENSG00000112297 CDS Human protein_coding chr6:106987324 chr6:106987327 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_82494 0 0 2 GRWD1 POSTAR2 ENCODE chr6:106987275-106987392
64251 chr13 113508641 113508641 1 + G A rs142008475 113508638 + 113508618 113508658 41 ATCGAGGCCCTGCAGAAGGCCGGGATCAAAGTCTGGGTTCT ATCGAGGCCCTGCAGAAGGCCGGAATCAAAGTCTGGGTTCT < 41bp 0.794963633997089 0.575757310209573 0.89728236 0.6003133 prediction 0.438412647575033 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113508638 chr13:113508641 synonymous SNV . 0 24 hm5C_associated_SNPs_82499 0 0 6 PPIG POSTAR2 ENCODE chr13:113508604-113508669
64251 chr20 61584141 61584141 1 + G A rs139060051 61584138 + 61584118 61584158 41 AGCCTGGGCTGGGAGGCAGCCCCGGGACACAGCTGTGCCCA AGCCTGGGCTGGGAGGCAGCCCCAGGACACAGCTGTGCCCA < 41bp 0.755643030480494 0.53644686479986 0.9019953 0.8457156 prediction 0.438392331361269 Functional Loss - SLC17A9 ENSG00000101194 UTR5 Human protein_coding chr20:61584138 chr20:61584141 . . 0 24 hm5C_associated_SNPs_82504 0 0 5 DDX3X POSTAR2 ENCODE chr20:61584091-61584191
64251 chr17 48561859 48561859 1 + G A rs577265481 48561856 + 48561836 48561876 41 TGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGCT TGGGATGTGTTTGGAGCGAACAAAGAGGTGCAGGAGCTGCT < 41bp 0.799880175648591 0.580684719531547 0.8914298 0.37556678 prediction 0.438390912234088 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48561856 chr17:48561859 synonymous SNV . 0 24 hm5C_associated_SNPs_82505 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:48561840-48561860
64251 chr5 52096530 52096530 1 + C T UCEC 52096528 + 52096508 52096548 41 GTCAAGATGGGGGCTTACCACACCATCGAGCTGGAGCCCAA GTCAAGATGGGGGCTTACCACATCATCGAGCTGGAGCCCAA < 41bp 0.859787242284115 0.640597548282444 0.1591906 0.11911395 prediction 0.438379388003341 Functional Loss - PELO ENSG00000152684 CDS Human protein_coding chr5:52096528 chr5:52096530 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82509 0 0 1 RBM15 POSTAR2 ENCODE chr5:52096468-52096549
64251 chr5 65288601 65288601 1 + G A LUSC 65288598 + 65288578 65288618 41 TGGTACCATGTCGCTGTCTACGAGGGGAAGAGGAGACTGTC TGGTACCATGTCGCTGTCTACGAAGGGAAGAGGAGACTGTC < 41bp 0.719189647087288 0.49792586005288 0.5349532 0.0941515 prediction 0.438379294174577 Functional Loss - ERBIN ENSG00000112851 CDS Human protein_coding chr5:65288598 chr5:65288601 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82510 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:65288569-65288670
64251 chr14 64911421 64911421 1 + G A LUAD 64911418 + 64911398 64911438 41 CTTTTCCTTCCAGGTCACTGCTGGACTGCCTCTTCCCAAGG CTTTTCCTTCCAGGTCACTGCTGAACTGCCTCTTCCCAAGG < 41bp 0.719186836300241 0.46997878738013 0.26703143 0.16058695 prediction 0.438373672600483 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64911418 chr14:64911421 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_82512 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:64911394-64911432
64251 chr12 28458701 28458701 1 + G T PRAD 28458699 + 28458679 28458719 41 ATCACCAGAGAATACACATGCAGCAAATAGCATTGTGAGTC ATCACCAGAGAATACACATGCATCAAATAGCATTGTGAGTC < 41bp 0.719182111727911 0.393398899738346 0.12581065 0.02805528 prediction 0.438364223455822 Functional Loss - CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28458699 chr12:28458701 nonsynonymous SNV 0.041 0 23 hm5C_associated_SNPs_82516 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:28458668-28458701
64251 chr5 176079825 176079825 1 + G A STAD 176079822 + 176079802 176079842 41 TTGTCTTCAAGGACTGGATTCGAGACCAGCTCAACCTCTTC TTGTCTTCAAGGACTGGATTCGAAACCAGCTCAACCTCTTC < 41bp 0.791579672127377 0.572407594684466 0.103731185 0.07982102 prediction 0.438344154885822 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079822 chr5:176079825 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82523 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:176079804-176079837
64251 chr20 47538519 47538519 1 + G T SARC 47538517 + 47538497 47538537 41 TGAAGCGGCCCCAGCACTCCCAGCTGCGCAGGGCCTGCCAG TGAAGCGGCCCCAGCACTCCCATCTGCGCAGGGCCTGCCAG < 41bp 0.719167026351785 0.368757455543078 0.89781046 0.85773385 prediction 0.438334052703569 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47538517 chr20:47538519 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_82524 0 0 2 FMR1 POSTAR2 ENCODE chr20:47538453-47538548
64251 chr11 102220740 102220740 1 + C T CESC 102220737 + 102220717 102220757 41 CTGTGAACTCTACAGAATGTCTACATATTCAACTTTCCCCG CTGTGAACTCTACAGAATGTCTATATATTCAACTTTCCCCG < 41bp 0.7253063917297 0.506141445396358 0.8123208 0.16805074 prediction 0.438329892666685 Functional Loss - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102220737 chr11:102220740 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82525 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr11:102220726-102220746
64251 chr19 1271030 1271030 1 + C T CESC 1271028 + 1271008 1271048 41 TTCTCAAAGTACGGACAGATCTCTGAAGGTGAGGCTGCTGC TTCTCAAAGTACGGACAGATCTTTGAAGGTGAGGCTGCTGC < 41bp 0.719152600793072 0.449848191177007 0.13873509 0.087165475 prediction 0.438305201586144 Functional Loss - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1271028 chr19:1271030 nonsynonymous SNV 0.340 3 23 hm5C_associated_SNPs_82530 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:1270947-1271033
64251 chr1 155288489 155288489 1 + G T UCEC 155288486 + 155288466 155288506 41 AGACTGAGATTGGGCAGACCCTGGACCTCCTCACAGCCCCC AGACTGAGATTGGGCAGACCCTGTACCTCCTCACAGCCCCC < 41bp 0.932699268618468 0.713547151295426 0.84850085 0.27308306 prediction 0.438304234646084 Functional Loss - FDPS ENSG00000160752 CDS Human protein_coding chr1:155288486 chr1:155288489 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_82531 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:155288448-155288504
64251 chr14 95035776 95035776 1 + G T UCEC 95035773 + 95035753 95035793 41 GACGTGGATGAGGCTGGCACCGAGGCTGCAGCAGCCACCAG GACGTGGATGAGGCTGGCACCGATGCTGCAGCAGCCACCAG < 41bp 0.931533439048978 0.7123845304793 0.80627894 0.19120169 prediction 0.438297817139356 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95035773 chr14:95035776 nonsynonymous SNV 0.005 2 24 hm5C_associated_SNPs_82535 0 0 4 DDX55 POSTAR2 ENCODE chr14:95035762-95035806
64251 chr6 27125947 27125947 1 + A C rs564047240 27125946 + 27125926 27125966 41 AGTACTCTGCGTTGTGGCCGCAGCAACCTCGGTTCGAATCC AGTACTCTGCGTTGTGGCCGCCGCAACCTCGGTTCGAATCC < 41bp 0.742198656903262 0.523049908372057 0.6566547 0.31513673 prediction 0.438297497062411 Functional Loss - MIR3143;PRSS16 ENSG00000265565;ENSG00000174572 intergenic Human other chr6:27125946 chr6:27125947 . . 0 22 hm5C_associated_SNPs_82536 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27125920-27126020
64251 chr19 53058097 53058097 1 + G T UCEC 53058094 + 53058074 53058114 41 TTCACAGCTGGCACGACATACAAGAATTCACACTGGAGAAA TTCACAGCTGGCACGACATACAATAATTCACACTGGAGAAA < 41bp 0.719145157586066 0.339112372435276 0.17862979 0.028375447 prediction 0.438290315172132 Functional Loss - ZNF808 ENSG00000198482 CDS Human protein_coding chr19:53058094 chr19:53058097 nonsynonymous SNV 0.095 0 24 hm5C_associated_SNPs_82538 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:53058071-53058097
64251 chr3 52521595 52521595 1 + C T UCEC 52521593 + 52521573 52521613 41 GCTCTGGAATGGGCCCTGGGCGCGGACGAGGACTTCCTGCT GCTCTGGAATGGGCCCTGGGCGTGGACGAGGACTTCCTGCT < 41bp 0.814688599071017 0.595545398050822 0.78309345 0.73624015 prediction 0.438286402040391 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52521593 chr3:52521595 nonsynonymous SNV 0.163 2 23 hm5C_associated_SNPs_82539 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:52521594-52521625
64251 chr14 55004493 55004493 1 + C T KIRC 55004490 + 55004470 55004510 41 GATAGGACTTATAAACTATCCTGCAGAATATTGTATCAATA GATAGGACTTATAAACTATCCTGTAGAATATTGTATCAATA < 41bp 0.738187990650631 0.51905489618016 0.08212119 0.119591 prediction 0.438266188940942 Functional Loss - CGRRF1 ENSG00000100532 CDS Human protein_coding chr14:55004490 chr14:55004493 synonymous SNV . 0 24 hm5C_associated_SNPs_82547 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr14:55004455-55004501
64251 chr6 35438387 35438387 1 + G A UCEC 35438384 + 35438364 35438404 41 GTCTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGAT GTCTGGCTGTAGCTGTTGGTCACATGAAGATGACAGACGAT < 41bp 0.778709936228132 0.559583260369279 0.42284492 0.3521107 prediction 0.438253351717706 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438384 chr6:35438387 nonsynonymous SNV 0.976 2 24 hm5C_associated_SNPs_82549 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:35438380-35438400
64251 chr1 2493252 2493252 1 + G A SKCM 2493249 + 2493229 2493269 41 ATGTGTGAAAAGAAGAAAGCCAAGGGGTGAGCACACGGCGG ATGTGTGAAAAGAAGAAAGCCAAAGGGTGAGCACACGGCGG < 41bp 0.794740607774584 0.575615242171566 0.5536622 0.28169686 prediction 0.438250731206036 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2493249 chr1:2493252 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_82551 0 0 1 PPIG POSTAR2 ENCODE chr1:2493204-2493257
64251 chr12 110925695 110925695 1 + G A SKCM 110925692 + 110925672 110925712 41 AACTGGATATGCATCTAAAACAAGATGTAAGTCACTGAAGA AACTGGATATGCATCTAAAACAAAATGTAAGTCACTGAAGA < 41bp 0.723388409939537 0.504265310982649 0.46208945 0.28195807 prediction 0.438246197913776 Functional Loss - FAM216A ENSG00000204856 CDS Human protein_coding chr12:110925692 chr12:110925695 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_82552 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:110925676-110925708
64251 chr22 20105156 20105156 1 + G T rs542523991 20105154 + 20105134 20105174 41 CGACCGACCCAGCCGAGCCGCCGCCGCCGCCGCGCCCCCAT CGACCGACCCAGCCGAGCCGCCTCCGCCGCCGCGCCCCCAT < 41bp 0.719115626008093 0.443968177153079 0.46371874 0.09865734 prediction 0.438231252016187 Functional Loss - RANBP1 ENSG00000099901 UTR5 Human protein_coding chr22:20105154 chr22:20105156 . . 0 23 hm5C_associated_SNPs_82555 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819211 chr22:20105040-20105160
64251 chr16 1559928 1559928 1 + G A HNSC 1559925 + 1559905 1559945 41 AAGAACAGGCTCCTCCCACCCGCGTCTCCCTAGTCCCTGGA AAGAACAGGCTCCTCCCACCCGCATCTCCCTAGTCCCTGGA < 41bp 0.774312806138897 0.555201378859659 0.26526135 0.12513673 prediction 0.438222854558478 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1559925 chr16:1559928 synonymous SNV . 0 24 hm5C_associated_SNPs_82558 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1559920-1559940
64251 chr2 71360405 71360405 1 + G A BLCA 71360402 + 71360382 71360422 41 GGGTGAGAGAGCTGAAAACTCAAGCAAATCTGATCTGAGGA GGGTGAGAGAGCTGAAAACTCAAACAAATCTGATCTGAGGA < 41bp 0.78839559803757 0.569285290374388 0.29938602 0.07915157 prediction 0.438220615326365 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71360402 chr2:71360405 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_82559 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:71360360-71360434
64251 chr1 93301854 93301854 1 + C T UCEC 93301851 + 93301831 93301871 41 GGTCAGCCAGGTGCCTTCACCTGCTATTTGGATGCAGGCCT GGTCAGCCAGGTGCCTTCACCTGTTATTTGGATGCAGGCCT < 41bp 0.734318506667045 0.515209324280488 0.5192293 0.5791417 prediction 0.438218364773114 Functional Loss - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93301851 chr1:93301854 synonymous SNV . 0 24 hm5C_associated_SNPs_82560 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:93301765-93301871
64251 chr12 132401058 132401058 1 + C T rs55815560 132401056 + 132401036 132401076 41 AACCGGACGCTGCCCGACCTCTCGGAGGTGGGACCCTTCCA AACCGGACGCTGCCCGACCTCTTGGAGGTGGGACCCTTCCA < 41bp 0.844938283562405 0.6258365675304 0.19214308 0.17339116 prediction 0.43820343206401 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132401056 chr12:132401058 nonsynonymous SNV 0.221 0 23 hm5C_associated_SNPs_82563 0 0 1 GRWD1 POSTAR2 ENCODE chr12:132401053-132401109
64251 chr14 76548711 76548711 1 + G A BLCA 76548708 + 76548688 76548728 41 TTGCAGGTGGCAGCCCCTCCCAGGTAGGTTAAATCAGATAT TTGCAGGTGGCAGCCCCTCCCAGATAGGTTAAATCAGATAT < 41bp 0.719095946616284 0.479654760476927 0.791221 0.294052 prediction 0.438191893232568 Functional Loss - IFT43 ENSG00000119650 splicing Human protein_coding chr14:76548708 chr14:76548711 . 0.839 0 24 hm5C_associated_SNPs_82567 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:76548707-76548728
64251 chr3 52514216 52514216 1 + G A UCEC 52514213 + 52514193 52514233 41 TCCTCAGGGTGGTGAAGACTCCCGGCTCTCAGCTGCCCCCT TCCTCAGGGTGGTGAAGACTCCCAGCTCTCAGCTGCCCCCT < 41bp 0.813807519423913 0.594713017491023 0.21578789 0.04831046 prediction 0.438189003865781 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52514213 chr3:52514216 nonsynonymous SNV 0.100 1 24 hm5C_associated_SNPs_82569 0 0 1 UCHL5 POSTAR2 ENCODE chr3:52514214-52514282
64251 chr12 123889471 123889471 1 + C T COAD 123889469 + 123889449 123889489 41 AAAGGCAGGGGTGTGATTGCCACCAAGCAGTTCTCCCGGGG AAAGGCAGGGGTGTGATTGCCATCAAGCAGTTCTCCCGGGG < 41bp 0.870446867375895 0.651352417898535 0.09245852 0.051492512 prediction 0.438188898954719 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123889469 chr12:123889471 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_82570 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:123889450-123889491
64251 chr5 140077223 140077223 1 + C T COAD 140077220 + 140077200 140077240 41 CCACACCACAGAAGAACTTTCTCCAAGAACGGTTGAAGCTT CCACACCACAGAAGAACTTTCTCTAAGAACGGTTGAAGCTT < 41bp 0.785324962532073 0.566231374396745 0.97305894 0.9439944 prediction 0.438187176270656 Functional Loss - HARS2 ENSG00000112855 CDS Human protein_coding chr5:140077220 chr5:140077223 stopgain 0.925 0 24 hm5C_associated_SNPs_82571 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:140077200-140077259
64251 chr19 6744835 6744835 1 + C T UCEC 6744832 + 6744812 6744852 41 ACTCCCACGTCCTTATAGAGCTGCACAAGTCAGGTTTTGCC ACTCCCACGTCCTTATAGAGCTGTACAAGTCAGGTTTTGCC < 41bp 0.719092244345771 0.495536874845392 0.12540683 0.17247155 prediction 0.438184488691542 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744832 chr19:6744835 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_82573 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr19:6744825-6744859
64251 chr19 30303636 30303636 1 + G C KIRC 30303632 + 30303612 30303652 41 GACACCATGAAGGAGGACGGCGGCGCGGAGTTCTCGGCTCG GACACCATGAAGGAGGACGGCGGCCCGGAGTTCTCGGCTCG < 41bp 0.874706325623895 0.655616952487841 0.8302045 0.4399831 prediction 0.438178746272109 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30303632 chr19:30303636 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_82575 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:30303620-30303640
64251 chr22 50615914 50615914 1 + C T SKCM 50615912 + 50615892 50615932 41 ACGCAGAAGCAGAACGAGTTCACCTGCGCGCTGGGCGCGTC ACGCAGAAGCAGAACGAGTTCATCTGCGCGCTGGGCGCGTC < 41bp 0.813168914263004 0.59408279579537 0.10793713 0.09950173 prediction 0.438172236935268 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615912 chr22:50615914 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_82578 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50615903-50615936
64251 chr12 4721773 4721773 1 + C T PAAD 4721771 + 4721751 4721791 41 GCATGCTTGGATTCATCAGTCTCGGAACCTCAAGCCACAGC GCATGCTTGGATTCATCAGTCTTGGAACCTCAAGCCACAGC < 41bp 0.847469881131211 0.628385981573912 0.08403593 0.032256424 prediction 0.438167799114599 Functional Loss - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4721771 chr12:4721773 nonsynonymous SNV 0.439 2 23 hm5C_associated_SNPs_82580 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:4721760-4721784
64251 chr19 40485749 40485749 1 + G A UCEC 40485746 + 40485726 40485766 41 GCATTCATCCGGGTCGTGGGCTCGGAGTTTGTACAGAAGTA GCATTCATCCGGGTCGTGGGCTCAGAGTTTGTACAGAAGTA < 41bp 0.794746831745138 0.575666218010664 0.18631217 0.1475406 prediction 0.438161227468948 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40485746 chr19:40485749 synonymous SNV . 0 24 hm5C_associated_SNPs_82582 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40485731-40485796
64251 chr12 118577321 118577321 1 + C T SKCM 118577319 + 118577299 118577339 41 ATCAGCAGTGGCACAGTCCTCTCCGATTATGTGGGCTCGGG ATCAGCAGTGGCACAGTCCTCTTCGATTATGTGGGCTCGGG < 41bp 0.863674451755968 0.644597088296641 0.1945554 0.0910165 prediction 0.438154726918656 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118577319 chr12:118577321 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_82585 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:118577286-118577322
64251 chr19 41727831 41727831 1 + C T LUAD 41727828 + 41727808 41727848 41 CCCGAAGACAGGACTGTGGCCGCCAACACCCCCTTCAACCT CCCGAAGACAGGACTGTGGCCGCTAACACCCCCTTCAACCT < 41bp 0.719072031430161 0.494500181034457 0.38654903 0.30280286 prediction 0.438144062860322 Functional Loss - AXL ENSG00000167601 CDS Human protein_coding chr19:41727828 chr19:41727831 synonymous SNV . 0 24 hm5C_associated_SNPs_82591 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:41727829-41727853
64251 chr15 67358541 67358541 1 + G A rs183418982 67358538 + 67358518 67358558 41 CCCCGATCGTGAAGCGCCTGCTGGGCTGGAAGAAGGGCGAG CCCCGATCGTGAAGCGCCTGCTGAGCTGGAAGAAGGGCGAG < 41bp 0.793286440609663 0.57421655675773 0.35319 0.24499455 prediction 0.438139767703866 Functional Loss - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67358538 chr15:67358541 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82593 0 0 1 RPS3 POSTAR2 ENCODE chr15:67358506-67358569
64251 chr1 6640775 6640775 1 + G A UCEC 6640772 + 6640752 6640792 41 CCACTCTGGACGTGGGGGGCCTGGTGTTTAAGGCACACTGG CCACTCTGGACGTGGGGGGCCTGATGTTTAAGGCACACTGG < 41bp 0.719065835890256 0.479400549017388 0.9006883 0.8858479 prediction 0.438131671780511 Functional Loss - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6640772 chr1:6640775 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_82595 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:6640748-6640775
64251 chr19 3434290 3434290 1 + G A CESC 3434287 + 3434267 3434307 41 CTCTGCAGCACCCGTGGTGACTGGAACAGGACCCAACTTCT CTCTGCAGCACCCGTGGTGACTGAAACAGGACCCAACTTCT < 41bp 0.719065497558752 0.474314724272774 0.3763944 0.29999524 prediction 0.438130995117504 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3434287 chr19:3434290 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_82596 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:3434280-3434300
64251 chr12 53689395 53689395 1 + T C PRAD 53689394 + 53689374 53689414 41 CGGAGCTGAATCTGCCGCAGCTAGAAATGCTCAAGAACCAG CGGAGCTGAATCTGCCGCAGCCAGAAATGCTCAAGAACCAG < 41bp 0.742984727143901 0.523920739658291 0.11129454 0.19976965 prediction 0.438127974971219 Functional Loss - PFDN5 ENSG00000123349 CDS Human protein_coding chr12:53689394 chr12:53689395 nonsynonymous SNV 0.970 2 22 hm5C_associated_SNPs_82598 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:53689339-53689399
64251 chr11 119003427 119003427 1 + C T GBM 119003424 + 119003404 119003444 41 CCTGCCCGCTGCCTTCCTCCCTCCGCAACCACATGCGCTTT CCTGCCCGCTGCCTTCCTCCCTCTGCAACCACATGCGCTTT < 41bp 0.747275991564911 0.528214457988136 0.06971675 0.14597556 prediction 0.43812306715355 Functional Loss - HINFP ENSG00000172273 CDS Human protein_coding chr11:119003424 chr11:119003427 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_82599 0 0 1 DDX24 POSTAR2 ENCODE chr11:119003425-119003487
64251 chr18 77895267 77895267 1 + C T LUAD 77895265 + 77895245 77895285 41 CACCAATGGCCGGTTCCATGCCCGGCATGCCCTCTCCTCCA CACCAATGGCCGGTTCCATGCCTGGCATGCCCTCTCCTCCA < 41bp 0.719055405502376 0.464263814712676 0.1321863 0.0720588 prediction 0.438110811004751 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895265 chr18:77895267 synonymous SNV . 0 23 hm5C_associated_SNPs_82600 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr18:77895250-77895310
64251 chr18 77895268 77895268 1 + G A PRAD 77895265 + 77895245 77895285 41 CACCAATGGCCGGTTCCATGCCCGGCATGCCCTCTCCTCCA CACCAATGGCCGGTTCCATGCCCAGCATGCCCTCTCCTCCA < 41bp 0.719055405502376 0.457179435632551 0.1321863 0.0254578 prediction 0.438110811004751 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895265 chr18:77895268 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_82601 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr18:77895250-77895310
64251 chr15 22993121 22993121 1 + C T rs149042952 22993119 + 22993099 22993139 41 AACCTGCGGGAGGTGGGGAACGCCATCCTCTTCTGCCTGCT AACCTGCGGGAGGTGGGGAACGTCATCCTCTTCTGCCTGCT < 41bp 0.852040813989482 0.632992076937878 0.6731267 0.37262964 prediction 0.438097474103209 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22993119 chr15:22993121 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_82603 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:22993117-22993138
64251 chr18 9535998 9535998 1 + C T rs142029067 9535996 + 9535976 9536016 41 ACCCGTGCATCTTACTGTAACCCGGGGGCCAGGCCGGCTCT ACCCGTGCATCTTACTGTAACCTGGGGGCCAGGCCGGCTCT < 41bp 0.787880007405091 0.568833838793383 0.40180457 0.47041914 prediction 0.438092337223415 Functional Loss - RALBP1 ENSG00000017797 UTR3 Human protein_coding chr18:9535996 chr18:9535998 . . 0 23 hm5C_associated_SNPs_82606 0 0 3 FXR2 POSTAR2 ENCODE chr18:9535990-9536030
64251 chr4 74280867 74280867 1 + G A SKCM 74280864 + 74280844 74280884 41 GCTGTGCCGCTGCAGATCCTCATGAATGCTATGCCAAAGTG GCTGTGCCGCTGCAGATCCTCATAAATGCTATGCCAAAGTG < 41bp 0.771719211173986 0.552674641562862 0.14488813 0.078820705 prediction 0.438089139222248 Functional Loss - ALB ENSG00000163631 CDS Human protein_coding chr4:74280864 chr4:74280867 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_82608 0 0 6 DHX30 POSTAR2 ENCODE chr4:74280785-74280885
64251 chr9 140137746 140137746 1 + G A BLCA 140137743 + 140137723 140137763 41 GGCTGTCTGTGACATCCCACCTCGGGGGCTAAAAATGTCCG GGCTGTCTGTGACATCCCACCTCAGGGGCTAAAAATGTCCG < 41bp 0.794257374624586 0.575229475099462 0.18168929 0.07790527 prediction 0.438055799050248 Functional Loss - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137743 chr9:140137746 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_82618 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr9:140137717-140137746
64251 chr2 113417287 113417287 1 + C T UCEC 113417284 + 113417264 113417304 41 TCTCTCTCCTCTTCCAGTTCCTGCAGATCCTTACAGCCTGC TCTCTCTCCTCTTCCAGTTCCTGTAGATCCTTACAGCCTGC < 41bp 0.752684964552269 0.533657663589065 0.863932 0.59808683 prediction 0.438054601926408 Functional Loss - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113417284 chr2:113417287 stopgain 0.995 1 24 hm5C_associated_SNPs_82619 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:113417240-113417289
64251 chr3 44700974 44700974 1 + G T BLCA 44700972 + 44700952 44700992 41 ACTGTGGCAAAGCCTTTACCCAGAGTGCAAATCTTATTGTA ACTGTGGCAAAGCCTTTACCCATAGTGCAAATCTTATTGTA < 41bp 0.719025998075399 0.376098844922861 0.77103007 0.13377205 prediction 0.438051996150798 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700972 chr3:44700974 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82620 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:44700961-44700990
64251 chr2 105716152 105716152 1 + G A UCEC 105716149 + 105716129 105716169 41 TGGACTACTTACTACTGATCCACGTGTGAGGGAACGGAAGA TGGACTACTTACTACTGATCCACATGTGAGGGAACGGAAGA < 41bp 0.763381453400367 0.544357117386575 0.14555627 0.027750552 prediction 0.438048672027584 Functional Loss - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105716149 chr2:105716152 nonsynonymous SNV 0.008 4 24 hm5C_associated_SNPs_82621 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:105716137-105716164
64251 chr16 81063959 81063959 1 + G A rs183024143 81063956 + 81063936 81063976 41 CACTTGTAATCCCAGCACTTCAGGAGGTTTCTCCTAGTGTA CACTTGTAATCCCAGCACTTCAGAAGGTTTCTCCTAGTGTA < 41bp 0.752341530519187 0.533319551920104 0.9077011 0.51271284 prediction 0.438043957198166 Functional Loss - CENPN ENSG00000260213 ncRNA_intronic Human antisense chr16:81063956 chr16:81063959 . . 0 24 hm5C_associated_SNPs_82622 0 0 6 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:81063950-81063972
64251 chr5 138160274 138160274 1 + A T LUAD 138160270 + 138160250 138160290 41 TGGCTGCAGCTAGAGGAATCCTGCAGAAGAACGTTCCGATC TGGCTGCAGCTAGAGGAATCCTGCTGAAGAACGTTCCGATC < 41bp 0.897894958456419 0.678876182961188 0.37257427 0.34665176 prediction 0.438037550990464 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138160270 chr5:138160274 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_82623 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:138160246-138160284
64251 chr2 148683671 148683671 1 + G A UCEC 148683668 + 148683648 148683688 41 ATCCATCTCTTGAAGACATGCAGGAAGTTGTTGTGCATAAA ATCCATCTCTTGAAGACATGCAGAAAGTTGTTGTGCATAAA < 41bp 0.742707834080356 0.523693586289528 0.4066331 0.12101591 prediction 0.438028495581655 Functional Loss - ACVR2A ENSG00000121989 CDS Human protein_coding chr2:148683668 chr2:148683671 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82629 0 0 1 PPIG POSTAR2 ENCODE chr2:148683624-148683731
64251 chr11 62532865 62532865 1 + G A LUAD 62532862 + 62532842 62532882 41 AACTCCAACCCACCATGTTACAAGACAATGGATGAGGTGAG AACTCCAACCCACCATGTTACAAAACAATGGATGAGGTGAG < 41bp 0.767918864351079 0.548907188876296 0.15266687 0.14173087 prediction 0.438023350949568 Functional Loss - POLR2G ENSG00000168002 CDS Human protein_coding chr11:62532862 chr11:62532865 synonymous SNV . 0 24 hm5C_associated_SNPs_82631 0 0 1 RPS3 POSTAR2 ENCODE chr11:62532850-62532868
64251 chr19 15795890 15795890 1 + C T GBM 15795888 + 15795868 15795908 41 TGCTCCTCAGGCCATGACACCACGGCCAGTGGCCTCTCCTG TGCTCCTCAGGCCATGACACCATGGCCAGTGGCCTCTCCTG < 41bp 0.826557315447178 0.607545906354374 0.90709025 0.83753324 prediction 0.438022818185608 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15795888 chr19:15795890 nonsynonymous SNV 0.304 3 23 hm5C_associated_SNPs_82632 0 0 4 BUD13 POSTAR2 ENCODE chr19:15795878-15795906
64251 chr5 137680896 137680896 1 + C T SKCM 137680894 + 137680874 137680914 41 GGGTCTCCAGCCTCAGGTTCCTCCAAGCTCCCAGTGCCTCT GGGTCTCCAGCCTCAGGTTCCTTCAAGCTCCCAGTGCCTCT < 41bp 0.719010727408306 0.418755344813148 0.9694377 0.5934502 prediction 0.438021454816611 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680894 chr5:137680896 synonymous SNV . 0 23 hm5C_associated_SNPs_82633 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:137680868-137680906
64251 chr13 113536285 113536285 1 + G A rs9603797 113536282 + 113536262 113536302 41 GCCTGGAAGGAGAAGGTGTCCACGGAGCCCCCACCCATCCT GCCTGGAAGGAGAAGGTGTCCACAGAGCCCCCACCCATCCT < 41bp 0.785088813332523 0.566080716445788 0.40813553 0.2785328 prediction 0.438016193773471 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113536282 chr13:113536285 synonymous SNV . 0 24 hm5C_associated_SNPs_82637 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:113536261-113536322
64251 chr14 105287637 105287637 1 + A C rs565234095 105287633 + 105287613 105287653 41 ACCAAGCTCTGTCCACTGCCCACCACCAACAGCCACCACTT ACCAAGCTCTGTCCACTGCCCACCCCCAACAGCCACCACTT < 41bp 0.719001009624639 0.339637097189875 0.06253657 0.02338168 prediction 0.438002019249279 Functional Loss - LINC00638 ENSG00000258701 ncRNA_exonic Human lincRNA chr14:105287633 chr14:105287637 . . 0 25 hm5C_associated_SNPs_82644 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:105287609-105287643
64251 chr2 73118517 73118517 1 + T C OV 73118516 + 73118496 73118536 41 CAGCAGTTGGCCCGGGAGACCTCCGTGGACCCAGACATGCG CAGCAGTTGGCCCGGGAGACCCCCGTGGACCCAGACATGCG < 41bp 0.718998095444489 0.464887792358916 0.35733196 0.20463535 prediction 0.437996190888977 Functional Loss - SPR ENSG00000116096 CDS Human protein_coding chr2:73118516 chr2:73118517 nonsynonymous SNV 0.701 2 22 hm5C_associated_SNPs_82645 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:73118480-73118518
64251 chr2 63824576 63824576 1 + G T UCEC 63824574 + 63824554 63824594 41 AAGACGTTGCCTTCAAAGACCTGGATGTGGCCATTCTTGTG AAGACGTTGCCTTCAAAGACCTTGATGTGGCCATTCTTGTG < 41bp 0.900295577897472 0.681300008942012 0.23881605 0.06362519 prediction 0.437991137910919 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63824574 chr2:63824576 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_82646 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:63824547-63824577
64251 chr7 36192907 36192907 1 + G A rs190204886 36192904 + 36192884 36192924 41 TGCGAGCGGGAGCCGTGCGGCTGGTGCTGGGTCTGGACTGG TGCGAGCGGGAGCCGTGCGGCTGATGCTGGGTCTGGACTGG < 41bp 0.718986040028785 0.481065786573817 0.43396795 0.4027535 prediction 0.437972080057571 Functional Loss - EEPD1 ENSG00000122547 UTR5 Human protein_coding chr7:36192904 chr7:36192907 . . 0 24 hm5C_associated_SNPs_82652 0 0 2 DDX3X POSTAR2 ENCODE chr7:36192881-36192953
64251 chr2 73452826 73452826 1 + T C STAD 73452825 + 73452805 73452845 41 GCCACAGCCGCCACAAGATCCTCAGGTGCCAGCTGGGGACA GCCACAGCCGCCACAAGATCCCCAGGTGCCAGCTGGGGACA < 41bp 0.7189812872619 0.45329578847995 0.101220906 0.14965776 prediction 0.437962574523801 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73452825 chr2:73452826 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_82655 0 0 2 PPIG POSTAR2 ENCODE chr2:73452775-73452827
64251 chr1 1168366 1168366 1 + C T rs533982228 1168364 + 1168344 1168384 41 GCCTCAGCCGCGACTACCTGCGCGCCTGGCACAGCGAGGAC GCCTCAGCCGCGACTACCTGCGTGCCTGGCACAGCGAGGAC < 41bp 0.723141418728249 0.504169513368224 0.28743732 0.3054822 prediction 0.437943810720048 Functional Loss - B3GALT6 ENSG00000176022 CDS Human protein_coding chr1:1168364 chr1:1168366 synonymous SNV . 0 23 hm5C_associated_SNPs_82659 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:1168333-1168401
64251 chr7 76058924 76058924 1 + G C LUAD 76058920 + 76058900 76058940 41 CATCGTGAGGACTAACCGCGCAGAGATTCCCATCGAGTGCC CATCGTGAGGACTAACCGCGCAGACATTCCCATCGAGTGCC < 41bp 0.718969398854316 0.414753504600933 0.35952654 0.09797296 prediction 0.437938797708633 Functional Loss - ZP3 ENSG00000188372 CDS Human protein_coding chr7:76058920 chr7:76058924 nonsynonymous SNV 0.020 1 25 hm5C_associated_SNPs_82660 0 0 2 LIN28B POSTAR2 ENCODE chr7:76058922-76058951
64251 chr14 105716844 105716844 1 + G A rs139544532 105716841 + 105716821 105716861 41 GTTGAACAAGACACCTTCTACACGGCCAGTGCCGTCCTGGA GTTGAACAAGACACCTTCTACACAGCCAGTGCCGTCCTGGA < 41bp 0.718962891640514 0.482989064929931 0.30795127 0.0510152 prediction 0.437925783281027 Functional Loss - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716841 chr14:105716844 synonymous SNV . 0 24 hm5C_associated_SNPs_82665 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr14:105716824-105716849
64251 chr6 37448763 37448763 1 + G A rs112485104 37448760 + 37448740 37448780 41 AGCAGTAACAAAGGGTACCTCCAGGGGTTTGGGTAGCGCTG AGCAGTAACAAAGGGTACCTCCAAGGGTTTGGGTAGCGCTG < 41bp 0.782739658217912 0.563778449132516 0.94127136 0.77969754 prediction 0.437922418170792 Functional Loss - CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448760 chr6:37448763 . . 0 24 hm5C_associated_SNPs_82666 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr6:37448747-37448768
64251 chr3 49017843 49017843 1 + G A STAD 49017840 + 49017820 49017860 41 CACAGACATACCAGCGGATTCACGAGAAGATTCAGGAGAGG CACAGACATACCAGCGGATTCACAAGAAGATTCAGGAGAGG < 41bp 0.748073541449154 0.529116425240479 0.21052378 0.102339715 prediction 0.437914232417349 Functional Loss - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49017840 chr3:49017843 nonsynonymous SNV 0.982 4 24 hm5C_associated_SNPs_82667 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:49017800-49017897
64251 chr10 6622426 6622426 1 + G C rs529486401 6622425 + 6622405 6622445 41 GGTCCCCCGCCGTGCGCCCCCGGTCCCGCGCCCAGGCTCCC GGTCCCCCGCCGTGCGCCCCCCGTCCCGCGCCCAGGCTCCC < 41bp 0.718956171853257 0.425836991108906 0.33799446 0.16446537 prediction 0.437912343706514 Functional Loss - PRKCQ-AS1 ENSG00000237943 ncRNA_exonic Human processed_transcript chr10:6622425 chr10:6622426 . . 0 22 hm5C_associated_SNPs_82668 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr10:6622401-6622432
64251 chr16 28884920 28884920 1 + G T COAD 28884918 + 28884898 28884938 41 GAGGCAAGAGAAAGAGAAAGCGGGCGGTGGAGGGGTCCCGG GAGGCAAGAGAAAGAGAAAGCGTGCGGTGGAGGGGTCCCGG < 41bp 0.898809258137569 0.679855331426128 0.9040054 0.80695003 prediction 0.437907853422881 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28884918 chr16:28884920 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82671 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr16:28884900-28884920
64251 chr19 41263302 41263302 1 + C T COAD 41263300 + 41263280 41263320 41 GATCCTGGATATCCTGGTATCACGGAGCCTGAAGATGAGGG GATCCTGGATATCCTGGTATCATGGAGCCTGAAGATGAGGG < 41bp 0.829302567193487 0.610348776473212 0.8683723 0.7186543 prediction 0.437907581440551 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41263300 chr19:41263302 nonsynonymous SNV 0.925 3 23 hm5C_associated_SNPs_82672 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:41263258-41263326
64251 chr3 42244033 42244033 1 + G A STAD 42244030 + 42244010 42244050 41 CTGCGCCGGGAGAACTACCTCTCGGAGAGGAGGTTCTTTGA CTGCGCCGGGAGAACTACCTCTCAGAGAGGAGGTTCTTTGA < 41bp 0.772111760854522 0.553160140012568 0.3928824 0.1868602 prediction 0.437903241683908 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42244030 chr3:42244033 synonymous SNV . 0 24 hm5C_associated_SNPs_82674 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:42244014-42244033
64251 chr2 179201135 179201135 1 + G A ESCA 179201132 + 179201112 179201152 41 GTGGCAGCCTGGTTACAGGACTCGGAAGAGATGGACAGGTG GTGGCAGCCTGGTTACAGGACTCAGAAGAGATGGACAGGTG < 41bp 0.718949421260549 0.48715525258621 0.12388563 0.15795302 prediction 0.437898842521098 Functional Loss - OSBPL6 ENSG00000079156 CDS Human protein_coding chr2:179201132 chr2:179201135 synonymous SNV . 0 24 hm5C_associated_SNPs_82677 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:179201130-179201147
64251 chr11 64878039 64878039 1 + G T UCEC 64878036 + 64878016 64878056 41 TTTCTCCGTGTACAGCAGCTCTCGGCAGCAGGGCCGCTACG TTTCTCCGTGTACAGCAGCTCTCTGCAGCAGGGCCGCTACG < 41bp 0.718944255185802 0.321488070810972 0.39173895 0.14591306 prediction 0.437888510371603 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878036 chr11:64878039 nonsynonymous SNV 0.969 2 24 hm5C_associated_SNPs_82684 0 0 3 FXR2 POSTAR2 ENCODE chr11:64878017-64878071
64251 chr20 42264573 42264573 1 + G A rs145672738 42264570 + 42264550 42264590 41 TTGATTATGAACACAGGGCTCACGAGCAGCTAAATGTGAAA TTGATTATGAACACAGGGCTCACAAGCAGCTAAATGTGAAA < 41bp 0.748708363852977 0.52976915027511 0.061805725 0.0049910545 prediction 0.437878427155734 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42264570 chr20:42264573 nonsynonymous SNV 0.950 1 24 hm5C_associated_SNPs_82686 0 0 2 YBX3 POSTAR2 ENCODE chr20:42264565-42264595
64251 chr17 37863262 37863262 1 + G T rs546886845 37863259 + 37863239 37863279 41 CCAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGC CCAGTGTGCACCGGCACAGACATTAAGCTGCGGCTCCCTGC < 41bp 0.718937464602892 0.331255083284329 0.061450273 0.057783544 prediction 0.437874929205785 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37863259 chr17:37863262 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_82688 1 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:37863262-37863263
64251 chr20 42089555 42089555 1 + G A LGG 42089552 + 42089532 42089572 41 TATAAAGTCAAAATCCAGATCAAGGAGCCAGTCCCGTTCCA TATAAAGTCAAAATCCAGATCAAAGAGCCAGTCCCGTTCCA < 41bp 0.718937059920853 0.482106063092247 0.317388 0.0871183 prediction 0.437874119841706 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089552 chr20:42089555 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_82690 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:42089513-42089664
64251 chr3 127981042 127981042 1 + C T SARC 127981039 + 127981019 127981059 41 AGAGGCCCCCGAAACTGAAGCTCCACAGGGCATTCCAGAGC AGAGGCCCCCGAAACTGAAGCTCTACAGGGCATTCCAGAGC < 41bp 0.733301021212456 0.514365272924244 0.91476333 0.9279039 prediction 0.437871496576423 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981039 chr3:127981042 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_82693 0 0 1 GRWD1 POSTAR2 ENCODE chr3:127980982-127981049
64251 chr19 50881461 50881461 1 + G A COAD 50881458 + 50881438 50881478 41 AAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTGGGCCACGA AAGCGAAAGAAGGGCCCAGCCCCAAAGATGCTGGGCCACGA < 41bp 0.767574143199235 0.548638626282825 0.42572486 0.39783573 prediction 0.43787103383282 Functional Loss - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881458 chr19:50881461 synonymous SNV . 0 24 hm5C_associated_SNPs_82694 0 0 1 ZNF622 POSTAR2 ENCODE chr19:50881446-50881493
64251 chr12 123892171 123892171 1 + C T UCEC 123892169 + 123892149 123892189 41 CTCATCGCCTCCCGAGACATCGCGGCTGGGGAGGAGCTCCT CTCATCGCCTCCCGAGACATCGTGGCTGGGGAGGAGCTCCT < 41bp 0.83360596682046 0.61467091977535 0.55101484 0.47969005 prediction 0.437870094090221 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892169 chr12:123892171 nonsynonymous SNV 0.702 1 23 hm5C_associated_SNPs_82695 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:123892150-123892191
64251 chr18 63477090 63477090 1 + C T COAD 63477087 + 63477067 63477107 41 AGGAGCAGGCCTACTACACGCTCCGAGCTCAAGCGCTGGAT AGGAGCAGGCCTACTACACGCTCTGAGCTCAAGCGCTGGAT < 41bp 0.718930291893336 0.488818904241355 0.00848639 0.012465656 prediction 0.437860583786673 Functional Loss - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63477087 chr18:63477090 stopgain 0.763 1 24 hm5C_associated_SNPs_82696 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:63477072-63477099
64251 chr1 3380072 3380072 1 + G A UCEC 3380069 + 3380049 3380089 41 ACATGGACGTGGACAAGGACCCCGGGGGCATGCTGAGGCGG ACATGGACGTGGACAAGGACCCCAGGGGCATGCTGAGGCGG < 41bp 0.718929479574583 0.466659393711587 0.7903197 0.2065081 prediction 0.437858959149165 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3380069 chr1:3380072 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_82697 0 0 1 BUD13 POSTAR2 ENCODE chr1:3380059-3380167
64251 chr1 3380071 3380071 1 + C T UCEC 3380069 + 3380049 3380089 41 ACATGGACGTGGACAAGGACCCCGGGGGCATGCTGAGGCGG ACATGGACGTGGACAAGGACCCTGGGGGCATGCTGAGGCGG < 41bp 0.718929479574583 0.469422827443221 0.7903197 0.4140104 prediction 0.437858959149165 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3380069 chr1:3380071 synonymous SNV . 0 23 hm5C_associated_SNPs_82698 0 0 1 BUD13 POSTAR2 ENCODE chr1:3380059-3380167
64251 chr6 96034560 96034560 1 + C T rs62417812 96034558 + 96034538 96034578 41 AATTTAAAAAGTGTTGAAATCACTATGAAACCTTCCAAAGC AATTTAAAAAGTGTTGAAATCATTATGAAACCTTCCAAAGC < 41bp 0.718929438562606 0.450532274184957 0.0676001 0.057100207 prediction 0.437858877125212 Functional Loss - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034558 chr6:96034560 nonsynonymous SNV 0.980 0 23 hm5C_associated_SNPs_82699 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:96034560-96034580
64251 chr6 151917610 151917610 1 + G A SKCM 151917607 + 151917587 151917627 41 GACAACGCGCATCTTACCATCAGGAACTTGCAGAAGAAGGT GACAACGCGCATCTTACCATCAGAAACTTGCAGAAGAAGGT < 41bp 0.773379834044964 0.554450496514167 0.86150783 0.52647966 prediction 0.437858675061595 Functional Loss - CCDC170 ENSG00000120262 CDS Human protein_coding chr6:151917607 chr6:151917610 synonymous SNV . 0 24 hm5C_associated_SNPs_82700 0 0 2 DGCR8 POSTAR2 ENCODE chr6:151917601-151917610
64251 chr19 47883232 47883232 1 + C T COAD 47883230 + 47883210 47883250 41 AGCAAGGAACTCCTGCAATTCACGGCATCCAAGGTACCCTC AGCAAGGAACTCCTGCAATTCATGGCATCCAAGGTACCCTC < 41bp 0.812971732109143 0.594048830158338 0.1261147 0.08772257 prediction 0.43784580390161 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47883230 chr19:47883232 nonsynonymous SNV 0.024 0 23 hm5C_associated_SNPs_82701 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:47883211-47883234
64251 chr19 39114783 39114783 1 + C T LUSC 39114780 + 39114760 39114800 41 CAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACAGA CAGATCCTGCTGAAGGCCCTCACTAACTTGCCGCACACAGA < 41bp 0.734549059877386 0.515633361721178 0.027125686 0.019913465 prediction 0.437831396312417 Functional Loss - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39114780 chr19:39114783 synonymous SNV . 0 24 hm5C_associated_SNPs_82707 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39114755-39114793
64251 chrX 72783164 72783164 1 + C T UCEC 72783162 + 72783142 72783182 41 ATGGCGGAGTTCGACACCATCTCGGAACTGGAGGAGGAGGA ATGGCGGAGTTCGACACCATCTTGGAACTGGAGGAGGAGGA < 41bp 0.822987337528404 0.604072089776613 0.5196905 0.20077202 prediction 0.437830495503582 Functional Loss - CHIC1 ENSG00000204116 CDS Human protein_coding chrX:72783162 chrX:72783164 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_82708 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:72783159-72783192
64251 chr20 11899940 11899940 1 + C T rs545857316 11899938 + 11899918 11899958 41 GTCAGGCAGTGCATGTTTCACTCGATTAGGGAGAGAGCGCA GTCAGGCAGTGCATGTTTCACTTGATTAGGGAGAGAGCGCA < 41bp 0.826790665445048 0.607877305676418 0.81085205 0.3433078 prediction 0.43782671953726 Functional Loss - BTBD3 ENSG00000132640 intronic Human protein_coding chr20:11899938 chr20:11899940 . . 0 23 hm5C_associated_SNPs_82709 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:11899940-11899952
64251 chr5 145638042 145638042 1 + C T SKCM 145638039 + 145638019 145638059 41 CATTGTGATCCAGACTGAACCACCAGTTCCTGTTTCGATTA CATTGTGATCCAGACTGAACCACTAGTTCCTGTTTCGATTA < 41bp 0.747173345837164 0.528264889477552 0.20556623 0.2272301 prediction 0.437816912719225 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145638039 chr5:145638042 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82710 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr5:145638018-145638046
64251 chr17 3627248 3627248 1 + G T STAD 3627245 + 3627225 3627265 41 CGGCCATGGCGGCTTCGCTCCCGGGACCTGGGAGCCGGCTT CGGCCATGGCGGCTTCGCTCCCGTGACCTGGGAGCCGGCTT < 41bp 0.718906751133413 0.323479735219486 0.9122138 0.6685866 prediction 0.437813502266826 Functional Loss - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3627245 chr17:3627248 stopgain 0.002 0 24 hm5C_associated_SNPs_82712 0 0 1 DDX3X POSTAR2 ENCODE chr17:3627213-3627305
64251 chr19 50905529 50905529 1 + C T PRAD 50905527 + 50905507 50905547 41 TCACCGTGGCGCTGCCGCGCCTCGTGGCCCCGGCCCGCCGT TCACCGTGGCGCTGCCGCGCCTTGTGGCCCCGGCCCGCCGT < 41bp 0.8215812856984 0.602676005646228 0.39731863 0.3100738 prediction 0.437810560104344 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905527 chr19:50905529 synonymous SNV . 0 23 hm5C_associated_SNPs_82713 0 0 6 BUD13 POSTAR2 ENCODE chr19:50905519-50905566
64251 chr17 5984047 5984047 1 + G A rs567587671 5984044 + 5984024 5984064 41 CAGTTCCTGCTGTTCTTCCTCACGGCTGCCTACCTGATGAC CAGTTCCTGCTGTTCTTCCTCACAGCTGCCTACCTGATGAC < 41bp 0.718895540750581 0.466849006518505 0.8970001 0.3781727 prediction 0.437791081501163 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:5984044 chr17:5984047 synonymous SNV . 0 24 hm5C_associated_SNPs_82719 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr17:5984035-5984059
64251 chr19 41822663 41822663 1 + C T STAD 41822661 + 41822641 41822681 41 CTTCTACTGTGCTGAGGTGGCCCGGCAGGGCACTGCCCGGC CTTCTACTGTGCTGAGGTGGCCTGGCAGGGCACTGCCCGGC < 41bp 0.718895404208927 0.460594757872794 0.120785624 0.20860875 prediction 0.437790808417855 Functional Loss - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822661 chr19:41822663 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_82720 0 0 1 RBM15 POSTAR2 ENCODE chr19:41822577-41822696
64251 chr1 150923294 150923294 1 + G A COAD 150923291 + 150923271 150923311 41 GAGATAGAACGCTACCTTTTCGAGACTGGCTGTGACTTCCT GAGATAGAACGCTACCTTTTCGAAACTGGCTGTGACTTCCT < 41bp 0.775366987369448 0.556473850883538 0.8545188 0.68836594 prediction 0.43778627297182 Functional Loss - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923291 chr1:150923294 synonymous SNV . 0 24 hm5C_associated_SNPs_82721 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:150923257-150923326
64251 chr16 69689567 69689567 1 + G T LIHC 69689564 + 69689544 69689584 41 AGTGTTTGTGGGCAACGACTCTGGACGAGTGAAACCACATG AGTGTTTGTGGGCAACGACTCTGTACGAGTGAAACCACATG < 41bp 0.71889275959424 0.348015319087354 0.32357395 0.13109368 prediction 0.437785519188481 Functional Loss - NFAT5 ENSG00000102908 CDS Human protein_coding chr16:69689564 chr16:69689567 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_82722 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr16:69689534-69689567
64251 chr5 138260997 138260997 1 + G A HNSC 138260994 + 138260974 138261014 41 GCAGCCGTGGAAGCCCTCAGCTCGGACCCTGCCCAGCCCAT GCAGCCGTGGAAGCCCTCAGCTCAGACCCTGCCCAGCCCAT < 41bp 0.802619358736624 0.583740143492985 0.5311962 0.310149 prediction 0.437758430487278 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138260994 chr5:138260997 synonymous SNV . 0 24 hm5C_associated_SNPs_82731 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr5:138260980-138261000
64251 chr10 124896612 124896612 1 + T C rs199720543 124896611 + 124896591 124896631 41 CTGAGAGACTCCTCCCCCGCCTCCGGCACAGACCGCGACTC CTGAGAGACTCCTCCCCCGCCCCCGGCACAGACCGCGACTC < 41bp 0.718878344230184 0.468236137313311 0.20582607 0.19344452 prediction 0.437756688460367 Functional Loss - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124896611 chr10:124896612 nonsynonymous SNV 0.254 3 22 hm5C_associated_SNPs_82732 0 0 3 BUD13 POSTAR2 ENCODE chr10:124896536-124896621
64251 chr1 117631499 117631499 1 + G A PRAD 117631496 + 117631476 117631516 41 AGCTCACAATGTTAAGAATCCCCGAGTGCAGACTTCCATAG AGCTCACAATGTTAAGAATCCCCAAGTGCAGACTTCCATAG < 41bp 0.718873948208416 0.480165134746081 0.11994484 0.18411288 prediction 0.437747896416832 Functional Loss - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117631496 chr1:117631499 nonsynonymous SNV 0.612 4 24 hm5C_associated_SNPs_82733 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:117631464-117631500
64251 chr16 82101891 82101891 1 + T C LUSC 82101890 + 82101870 82101910 41 GCTGAGGAATTGCGAAGAACCTGCTCTCCGCGCCTCTCGGT GCTGAGGAATTGCGAAGAACCCGCTCTCCGCGCCTCTCGGT < 41bp 0.801638771402716 0.582776145725142 0.13210803 0.083234996 prediction 0.437725251355147 Functional Loss - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82101890 chr16:82101891 nonsynonymous SNV 0.122 3 22 hm5C_associated_SNPs_82739 0 0 2 RPS3 POSTAR2 ENCODE chr16:82101803-82101897
64251 chr1 41012346 41012346 1 + C T SKCM 41012344 + 41012324 41012364 41 TTCTGACTATGGAGAGAATCCACCATTATAATATGAGCACA TTCTGACTATGGAGAGAATCCATCATTATAATATGAGCACA < 41bp 0.831119477309436 0.612259067142479 0.18815148 0.06908503 prediction 0.437720820333915 Functional Loss - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41012344 chr1:41012346 synonymous SNV . 0 23 hm5C_associated_SNPs_82742 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:41012324-41012347
64251 chr3 119533877 119533877 1 + G T UCEC 119533874 + 119533854 119533894 41 CTGCTGAAGGGGGCCGCTTTCGAGCTGTGTCAACTGAGATT CTGCTGAAGGGGGCCGCTTTCGATCTGTGTCAACTGAGATT < 41bp 0.718857556085411 0.308043969616828 0.89131606 0.11235458 prediction 0.437715112170821 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119533874 chr3:119533877 nonsynonymous SNV 0.453 4 24 hm5C_associated_SNPs_82745 0 0 2 PPIG POSTAR2 ENCODE chr3:119533825-119533882
64251 chrX 75397487 75397487 1 + G A UCEC 75397484 + 75397464 75397504 41 ATTCTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATA ATTCTTTGCCATTGAAATTGCTCAGAACCGGGAAGGCTATA < 41bp 0.742189862243241 0.523333668776194 0.27314454 0.2844503 prediction 0.437712386934094 Functional Loss - PBDC1 ENSG00000102390 CDS Human protein_coding chrX:75397484 chrX:75397487 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82746 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:75397468-75397500
64251 chr19 49674971 49674971 1 + G A BLCA 49674968 + 49674948 49674988 41 GGGAGCCAGGCAAGGCGAAGCCCGAGATCGAATCAGGCGTT GGGAGCCAGGCAAGGCGAAGCCCAAGATCGAATCAGGCGTT < 41bp 0.718853530717553 0.470534237754666 0.3674469 0.42822573 prediction 0.437707061435106 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49674968 chr19:49674971 nonsynonymous SNV 0.335 0 24 hm5C_associated_SNPs_82749 0 0 1 SRSF1 POSTAR2 ENCODE chr19:49674898-49674974
64251 chr16 31885195 31885195 1 + G A rs367609414 31885192 + 31885172 31885212 41 CTGGGAGGCCCAGGCGGCTTCGCGTTCTGAGAATAAACAGA CTGGGAGGCCCAGGCGGCTTCGCATTCTGAGAATAAACAGA < 41bp 0.718847124792968 0.477966340362067 0.7307316 0.39534324 prediction 0.437694249585936 Functional Loss - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31885192 chr16:31885195 unknown . 0 24 hm5C_associated_SNPs_82753 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:31885165-31885197
64251 chr7 93555734 93555734 1 + A C rs73428154 93555733 + 93555713 93555753 41 TTTAAGAGAGCAGAGAGTATCAGATGTACAATTATGGAAAT TTTAAGAGAGCAGAGAGTATCCGATGTACAATTATGGAAAT < 41bp 0.780464887993628 0.561617873488269 0.8840569 0.38324612 prediction 0.437694029010719 Functional Loss - GNG11 ENSG00000127920 UTR3 Human protein_coding chr7:93555733 chr7:93555734 . . 0 22 hm5C_associated_SNPs_82755 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr7:93555734-93555755
64251 chr4 726202 726202 1 + C T rs73221123 726200 + 726180 726220 41 CCTGGGCAGGCTCCCGTGTCCTCAGTATGCATCAGGTCTCC CCTGGGCAGGCTCCCGTGTCCTTAGTATGCATCAGGTCTCC < 41bp 0.718841668521352 0.491014216803511 0.103096604 0.12693027 prediction 0.437683337042704 Functional Loss - PCGF3 ENSG00000185619 UTR5 Human protein_coding chr4:726200 chr4:726202 . . 0 23 hm5C_associated_SNPs_82763 0 0 25 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:726184-726205
64251 chr20 62614420 62614420 1 + G A COAD 62614417 + 62614397 62614437 41 CAGCGCCACTGGCTTCACCACGCGGTCAGACATTGGGCCCG CAGCGCCACTGGCTTCACCACGCAGTCAGACATTGGGCCCG < 41bp 0.792287364511833 0.5734496842539 0.8951228 0.722448 prediction 0.437675360515866 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62614417 chr20:62614420 nonsynonymous SNV 0.928 5 24 hm5C_associated_SNPs_82766 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:62614400-62614420
64251 chr1 52803503 52803503 1 + G A rs141578777 52803500 + 52803480 52803520 41 ATTCCTTGAGGCAGGCACTGCGAGAGATGAAGGACTTCACC ATTCCTTGAGGCAGGCACTGCGAAAGATGAAGGACTTCACC < 41bp 0.71883538559413 0.479550245880106 0.8606777 0.23164341 prediction 0.43767077118826 Functional Loss - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52803500 chr1:52803503 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_82767 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:52803487-52803517
64251 chr16 88779820 88779820 1 + G A UCEC 88779817 + 88779797 88779837 41 CTATCAAGCTCATGACCAACCTGGCGCTGGGTCGAGGGGCC CTATCAAGCTCATGACCAACCTGACGCTGGGTCGAGGGGCC < 41bp 0.802387755128204 0.583553621689327 0.1608415 0.0651958 prediction 0.437668266877754 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779817 chr16:88779820 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_82768 0 0 1 YBX3 POSTAR2 ENCODE chr16:88779777-88779846
64251 chr12 69140381 69140381 1 + C T rs145269194 69140379 + 69140359 69140399 41 GCCCCCAAAAGTCTGCCGCCCTCCAGGCTCCTCCTCCTGGC GCCCCCAAAAGTCTGCCGCCCTTCAGGCTCCTCCTCCTGGC < 41bp 0.848464358499703 0.629633613763975 0.9361206 0.15341881 prediction 0.437661489471457 Functional Loss - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69140379 chr12:69140381 nonsynonymous SNV 0.773 0 23 hm5C_associated_SNPs_82770 0 0 1 RBM15 POSTAR2 ENCODE chr12:69140353-69140434
64251 chr2 176959357 176959357 1 + G T SARC 176959355 + 176959335 176959375 41 GGACAAGCGGCGGCGTATCTCGGCTGCTACGAACCTATCTG GGACAAGCGGCGGCGTATCTCGTCTGCTACGAACCTATCTG < 41bp 0.718829348622144 0.398596987784284 0.91512096 0.5722249 prediction 0.437658697244288 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176959355 chr2:176959357 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_82772 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176959278-176959407
64251 chr10 1061808 1061808 1 + G A UCEC 1061805 + 1061785 1061825 41 TGGGAGTTGCTCTCGAACTCCACGTGACGTTTCTGGTCTTA TGGGAGTTGCTCTCGAACTCCACATGACGTTTCTGGTCTTA < 41bp 0.718829342152197 0.474721612454399 0.47810957 0.4724955 prediction 0.437658684304394 Functional Loss - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061805 chr10:1061808 nonsynonymous SNV 0.544 4 24 hm5C_associated_SNPs_82773 0 0 3 FXR2 POSTAR2 ENCODE chr10:1061763-1061814
64251 chr9 127982928 127982928 1 + G C HNSC 127982924 + 127982904 127982944 41 CAGCTATATGTCTTTGGGGGCGGAGAGAGAGGTGCCCAGCC CAGCTATATGTCTTTGGGGGCGGACAGAGAGGTGCCCAGCC < 41bp 0.718828870654501 0.421713805212072 0.9281949 0.89232194 prediction 0.437657741309002 Functional Loss - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982924 chr9:127982928 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_82774 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:127982906-127982930
64251 chr1 100606013 100606013 1 + C T STAD 100606011 + 100605991 100606031 41 TTATGTCCCATCCAGCATTACACGATGCACTTAATGACCCT TTATGTCCCATCCAGCATTACATGATGCACTTAATGACCCT < 41bp 0.855031386678124 0.636207505463147 0.09581894 0.12869999 prediction 0.437647762429954 Functional Loss - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100606011 chr1:100606013 synonymous SNV . 0 23 hm5C_associated_SNPs_82776 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:100605992-100606030
64251 chr11 118404150 118404150 1 + G A rs149751735 118404147 + 118404127 118404167 41 TCCTCCAGGGCTTCTGGCTACCCGGGTGGAAGTGCCACTGC TCCTCCAGGGCTTCTGGCTACCCAGGTGGAAGTGCCACTGC < 41bp 0.785236056571215 0.566419580308554 0.69545674 0.2836507 prediction 0.437632952525321 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118404147 chr11:118404150 nonsynonymous SNV 0.934 0 24 hm5C_associated_SNPs_82781 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118404129-118404191
64251 chr22 23523546 23523546 1 + G T LUAD 23523543 + 23523523 23523563 41 GCCAGGCCCGGGACCGCCCGCAGGCCCGGGGCAGCCGCGTC GCCAGGCCCGGGACCGCCCGCAGTCCCGGGGCAGCCGCGTC < 41bp 0.718815243023147 0.33194153902022 0.84566826 0.25915456 prediction 0.437630486046295 Functional Loss - BCR ENSG00000186716 CDS Human protein_coding chr22:23523543 chr22:23523546 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_82784 0 0 4 DDX3X POSTAR2 ENCODE chr22:23523515-23523560
64251 chr15 43690283 43690283 1 + C T COAD 43690280 + 43690260 43690300 41 GGCCTTCTCGGGAAACTTCTCCCCGGGAAGCCCCTGCATCT GGCCTTCTCGGGAAACTTCTCCCTGGGAAGCCCCTGCATCT < 41bp 0.720482151470104 0.501670874271811 0.38428208 0.38549763 prediction 0.437622554396585 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43690280 chr15:43690283 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_82786 0 0 5 U2AF1 POSTAR2 ENCODE chr15:43690232-43690325
64251 chr5 156752621 156752621 1 + G A LUAD 156752618 + 156752598 156752638 41 GGATTCTAACGGACCATATCCTGGAAACCAAAGAACCTTCC GGATTCTAACGGACCATATCCTGAAAACCAAAGAACCTTCC < 41bp 0.770419480627642 0.55161083595828 0.33700192 0.2215246 prediction 0.437617289338724 Functional Loss - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156752618 chr5:156752621 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_82788 0 0 1 PPIG POSTAR2 ENCODE chr5:156752544-156752634
64251 chr12 46242663 46242663 1 + G A UCEC 46242660 + 46242640 46242680 41 AAATCCAGATTGTTCTGTTTCTCGAGCAGAAATGTATTCTG AAATCCAGATTGTTCTGTTTCTCAAGCAGAAATGTATTCTG < 41bp 0.719754830031529 0.500947089787318 0.091174245 0.0797635 prediction 0.437615480488422 Functional Loss - ARID2 ENSG00000189079 CDS Human protein_coding chr12:46242660 chr12:46242663 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82791 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:46242660-46242680
64251 chr6 26217579 26217579 1 + A C SKCM 26217575 + 26217555 26217595 41 CTAAGAAGACGGAGAGCCACCATAAGGCCAAGGGCAAGTGA CTAAGAAGACGGAGAGCCACCATACGGCCAAGGGCAAGTGA < 41bp 0.718802220986985 0.333949306052754 0.071831405 0.04661101 prediction 0.437604441973971 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217575 chr6:26217579 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_82794 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26217560-26217580
64251 chr14 31355241 31355241 1 + G A SKCM 31355238 + 31355218 31355258 41 ATAGCCAAGACTTTTGAAATCTCGGACATTGGTGCCAAGAT ATAGCCAAGACTTTTGAAATCTCAGACATTGGTGCCAAGAT < 41bp 0.718799128730192 0.482744743153678 0.12023115 0.075129926 prediction 0.437598257460384 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31355238 chr14:31355241 synonymous SNV . 0 24 hm5C_associated_SNPs_82795 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:31355197-31355271
64251 chr11 119003661 119003661 1 + C T BLCA 119003658 + 119003638 119003678 41 TGTGATTTTGAGAACTGCACCTTCAGTGCCCGATCCCTCTG TGTGATTTTGAGAACTGCACCTTTAGTGCCCGATCCCTCTG < 41bp 0.718794542071295 0.485821290845625 0.027639747 0.018859744 prediction 0.43758908414259 Functional Loss - HINFP ENSG00000172273 CDS Human protein_coding chr11:119003658 chr11:119003661 synonymous SNV . 0 24 hm5C_associated_SNPs_82798 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:119003654-119003678
64251 chr7 137773440 137773440 1 + G A SKCM 137773437 + 137773417 137773457 41 CCTACATCTACCAAAATGAACACGAAGTTGGGGAGGCCATC CCTACATCTACCAAAATGAACACAAAGTTGGGGAGGCCATC < 41bp 0.76621941768727 0.547429983833558 0.09440559 0.052036464 prediction 0.437578867707425 Functional Loss - AKR1D1 ENSG00000122787 CDS Human protein_coding chr7:137773437 chr7:137773440 nonsynonymous SNV 0.339 4 24 hm5C_associated_SNPs_82802 0 0 1 GRWD1 POSTAR2 ENCODE chr7:137773340-137773495
64251 chr12 133298716 133298716 1 + C T rs192415797 133298714 + 133298694 133298734 41 GCTGGTCTCGGCTGAGGTGACACGCTAGTGACAGCCCAATA GCTGGTCTCGGCTGAGGTGACATGCTAGTGACAGCCCAATA < 41bp 0.718788155872518 0.487667498395369 0.30095753 0.27388835 prediction 0.437576311745035 Functional Loss - PGAM5 ENSG00000247077 UTR3 Human protein_coding chr12:133298714 chr12:133298716 . . 0 23 hm5C_associated_SNPs_82804 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:133298588-133298745
64251 chr1 44365293 44365293 1 + C T SKCM 44365291 + 44365271 44365311 41 CGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCA CGCATCACCTACCCCGAGGGCGTCATGCAGCGGCCTGAGCA < 41bp 0.806109749141995 0.587321709264098 0.29925397 0.2924474 prediction 0.437576079755795 Functional Loss - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44365291 chr1:44365293 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82805 0 0 3 DDX24 POSTAR2 ENCODE chr1:44365207-44365320
64251 chr19 51920435 51920435 1 + C T PRAD 51920433 + 51920413 51920453 41 TGTGACTCATCCTGCATCTGCGCGTCTCTGATCACCAAGGA TGTGACTCATCCTGCATCTGCGTGTCTCTGATCACCAAGGA < 41bp 0.782794097324993 0.564009788621215 0.06621665 0.058779478 prediction 0.437568617407556 Functional Loss - SIGLEC10 ENSG00000142512 CDS Human protein_coding chr19:51920433 chr19:51920435 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_82808 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:51920416-51920442
64251 chr12 58166853 58166853 1 + G A OV 58166850 + 58166830 58166870 41 CAAAATGTGGATTTCCGAGGCAAGAAGGTGATCGAACTGGG CAAAATGTGGATTTCCGAGGCAAAAAGGTGATCGAACTGGG < 41bp 0.786757185075496 0.567976652191419 0.4146522 0.38020748 prediction 0.437561065768152 Functional Loss - EEF1AKMT3 ENSG00000123427;ENSG00000257921 CDS Human other chr12:58166850 chr12:58166853 synonymous SNV . 0 24 hm5C_associated_SNPs_82810 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr12:58166826-58166863
64251 chr19 49129184 49129184 1 + G A rs150682825 49129181 + 49129161 49129201 41 AGCTGACCGGGAGCTGGGGCCACGGGCCTAGGAGCACCCTG AGCTGACCGGGAGCTGGGGCCACAGGCCTAGGAGCACCCTG < 41bp 0.793644236696827 0.574864410557236 0.90122974 0.8997278 prediction 0.437559652279183 Functional Loss - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49129181 chr19:49129184 nonsynonymous SNV 0.843 0 24 hm5C_associated_SNPs_82811 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49129165-49129184
64251 chr17 65027995 65027995 1 + G A rs143223580 65027992 + 65027972 65028012 41 GTCCCCTGAGCGTTGGGGGTCCCGGGGGAGAGGTGGACAGA GTCCCCTGAGCGTTGGGGGTCCCAGGGGAGAGGTGGACAGA < 41bp 0.792246820948509 0.573470107996964 0.9210981 0.7260239 prediction 0.43755342590309 Functional Loss - CACNG4 ENSG00000214167 CDS Human other chr17:65027992 chr17:65027995 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_82813 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:65027983-65028009
64251 chr19 35655081 35655081 1 + G A UCEC 35655078 + 35655058 35655098 41 GCTCATCCCACTGATGACACCACGACGCTCTCTGAGAGACC GCTCATCCCACTGATGACACCACAACGCTCTCTGAGAGACC < 41bp 0.718775963305193 0.486346566933188 0.107131034 0.036805063 prediction 0.437551926610386 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35655078 chr19:35655081 synonymous SNV . 0 24 hm5C_associated_SNPs_82814 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35655058-35655081
64251 chr19 14815883 14815883 1 + G T LUAD 14815881 + 14815861 14815901 41 GCCAGGGGCCGGGGCTGTTCCTGAGGATGCAGCTGGTGCCC GCCAGGGGCCGGGGCTGTTCCTTAGGATGCAGCTGGTGCCC < 41bp 0.818844088677975 0.600076981731046 0.87816286 0.39754698 prediction 0.437534213893858 Functional Loss - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14815881 chr19:14815883 stopgain 0.085 0 23 hm5C_associated_SNPs_82818 0 0 1 BUD13 POSTAR2 ENCODE chr19:14815856-14816029
64251 chr9 101891277 101891277 1 + C T STAD 101891275 + 101891255 101891295 41 AGCTGAAATTGACTTAATTCCTCGAGATAGGCCGTTTGTAT AGCTGAAATTGACTTAATTCCTTGAGATAGGCCGTTTGTAT < 41bp 0.867991193060852 0.649229844657588 0.61907595 0.093040854 prediction 0.437522696806528 Functional Loss - TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101891275 chr9:101891277 stopgain 1.000 1 23 hm5C_associated_SNPs_82819 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:101891251-101891280
64251 chr1 95709799 95709799 1 + A T UCEC 95709795 + 95709775 95709815 41 GGGACCGTGTTCAGAATTCACACAAAAGCTGAAGGATTTAT GGGACCGTGTTCAGAATTCACACATAAGCTGAAGGATTTAT < 41bp 0.718756915385096 0.39081909480978 0.043409824 0.02678451 prediction 0.437513830770193 Functional Loss - RWDD3;TMEM56-RWDD3 ENSG00000122481;ENSG00000271092 CDS Human other chr1:95709795 chr1:95709799 stopgain 0.994 0 25 hm5C_associated_SNPs_82824 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:95709782-95709823
64251 chr4 69968602 69968602 1 + G A UCEC 69968599 + 69968579 69968619 41 CTGGGGTCAATGGTCAGTAACATGACAGAAGAAAGGGCCAA CTGGGGTCAATGGTCAGTAACATAACAGAAGAAAGGGCCAA < 41bp 0.76912464191675 0.550370422179891 0.3761982 0.24900213 prediction 0.437508439473718 Functional Loss - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69968599 chr4:69968602 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_82826 0 0 1 SND1 POSTAR2 ENCODE chr4:69968599-69968653
64251 chr22 35734776 35734776 1 + G T ACC 35734774 + 35734754 35734794 41 GGACGCCCGGCAGCAGAGCACTGGCGCGGTAAGCAGAGGGG GGACGCCCGGCAGCAGAGCACTTGCGCGGTAAGCAGAGGGG < 41bp 0.718753035439832 0.368891220111807 0.39282787 0.29790285 prediction 0.437506070879664 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35734774 chr22:35734776 nonsynonymous SNV 0.950 3 23 hm5C_associated_SNPs_82827 0 0 3 PPIG POSTAR2 ENCODE chr22:35734707-35734797
64251 chr19 13056783 13056783 1 + C T COAD 13056781 + 13056761 13056801 41 CCATGGCCGTCACCATCACGCTCAAAACGCTGCAGCAGCAG CCATGGCCGTCACCATCACGCTTAAAACGCTGCAGCAGCAG < 41bp 0.793142819362817 0.574390392027295 0.18275657 0.10951808 prediction 0.437504854671043 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13056781 chr19:13056783 synonymous SNV . 0 23 hm5C_associated_SNPs_82829 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13056680-13056800
64251 chr18 77895236 77895236 1 + G A SARC 77895233 + 77895213 77895253 41 GCCCATCCAGCTCCTGCCGTCAGGTGCAGCTGCACCAATGG GCCCATCCAGCTCCTGCCGTCAGATGCAGCTGCACCAATGG < 41bp 0.808038494842786 0.589286829206552 0.9078702 0.915793 prediction 0.437503331272468 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895233 chr18:77895236 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_82830 0 0 2 RBM15 POSTAR2 ENCODE chr18:77895157-77895239
64251 chr13 113898807 113898807 1 + A T TGCT 113898803 + 113898783 113898823 41 GAGCGGACGTTGGACAAGATCATGATCCTGTTCAGGTTTAT GAGCGGACGTTGGACAAGATCATGTTCCTGTTCAGGTTTAT < 41bp 0.718747244411184 0.382140026141418 0.23613393 0.26526368 prediction 0.437494488822367 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113898803 chr13:113898807 nonsynonymous SNV 0.908 2 25 hm5C_associated_SNPs_82834 0 0 6 BUD13 POSTAR2 ENCODE chr13:113898758-113898848
64251 chr12 53684212 53684212 1 + G T GBM 53684209 + 53684189 53684229 41 ACAGCAGCTGTACTGACAAGCGAGAATGGTGGACAGGGCGG ACAGCAGCTGTACTGACAAGCGATAATGGTGGACAGGGCGG < 41bp 0.718743515084304 0.318895490621872 0.5569647 0.8464612 prediction 0.437487030168608 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53684209 chr12:53684212 stopgain 0.997 0 24 hm5C_associated_SNPs_82837 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53684205-53684215
64251 chr9 100845195 100845195 1 + C T UCEC 100845193 + 100845173 100845213 41 ATTCTAACAATGGACATGCTCACCGTGAAGGTGGGTGAGCC ATTCTAACAATGGACATGCTCATCGTGAAGGTGGGTGAGCC < 41bp 0.718743158195685 0.450495819249718 0.059341013 0.07934561 prediction 0.437486316391369 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100845193 chr9:100845195 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_82838 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:100845180-100845200
64251 chr19 41084070 41084070 1 + G A UCEC 41084067 + 41084047 41084087 41 TTCTACTACCCAGGGGTGTCCACGGTTCCAGCCTCCTCCAT TTCTACTACCCAGGGGTGTCCACAGTTCCAGCCTCCTCCAT < 41bp 0.805309712955915 0.586568099508425 0.6838727 0.20219001 prediction 0.43748322689498 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41084067 chr19:41084070 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_82840 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:41084040-41084078
64251 chr14 24769991 24769991 1 + A T rs200463538 24769987 + 24769967 24770007 41 ACACATGGCAGCTTCGTGGTCAGAACTCTGCTTCAGGTGTT ACACATGGCAGCTTCGTGGTCAGATCTCTGCTTCAGGTGTT < 41bp 0.718740918727271 0.392068087399225 0.5511475 0.5680826 prediction 0.437481837454543 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24769987 chr14:24769991 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_82841 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:24769971-24770003
64251 chrX 47040962 47040962 1 + C T CESC 47040960 + 47040940 47040980 41 TGTGTCGATGCAGGCTTTCTCTCGCGCCCAGCCTGGTGCTG TGTGTCGATGCAGGCTTTCTCTTGCGCCCAGCCTGGTGCTG < 41bp 0.827963574266701 0.609225078298965 0.37486637 0.22335741 prediction 0.437476991935472 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47040960 chrX:47040962 nonsynonymous SNV 0.699 2 23 hm5C_associated_SNPs_82844 1 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47040923-47040967
64251 chr3 57898181 57898181 1 + A C COAD 57898177 + 57898157 57898197 41 GGACAGTGAAATCACAAGTACTAGAGATGAATTGCTTAGTG GGACAGTGAAATCACAAGTACTAGCGATGAATTGCTTAGTG < 41bp 0.718728775801296 0.311371482988536 0.6657223 0.2655308 prediction 0.437457551602592 Functional Loss - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57898177 chr3:57898181 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_82849 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:57898171-57898185
64251 chr1 161582571 161582571 1 + G A rs114835251 161582568 + 161582548 161582588 41 AGTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTTG AGTTAACGCGGGTTCGATTCCCGAGTAACGAAACGTTTTTG < 41bp 0.747352131616721 0.528628945915716 0.91780305 0.8638439 prediction 0.43744637140201 Functional Loss - HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582568 chr1:161582571 . . 0 24 hm5C_associated_SNPs_82851 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr10 99991401 99991401 1 + G A COAD 99991398 + 99991378 99991418 41 TTGAAATTTATGACTTTCCCCAAGAATTTCATACTGAAGAC TTGAAATTTATGACTTTCCCCAAAAATTTCATACTGAAGAC < 41bp 0.762350222465599 0.543631796212296 0.04042107 0.034058273 prediction 0.437436852506606 Functional Loss - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99991398 chr10:99991401 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_82856 0 0 1 FUS POSTAR2 SRX029328 chr10:99991380-99991401
64251 chr2 238978070 238978070 1 + G A UCEC 238978067 + 238978047 238978087 41 TCATTACTTCCTCGGTGGAACACGACTCCATCCGGCTGCCC TCATTACTTCCTCGGTGGAACACAACTCCATCCGGCTGCCC < 41bp 0.797465306306433 0.578748650662151 0.0474374 0.037442893 prediction 0.437433311288565 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238978067 chr2:238978070 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_82859 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:238978052-238978081
64251 chr19 49671550 49671550 1 + G A STAD 49671547 + 49671527 49671567 41 TGTCACTGGGGGTCTGCACACGGGCATCGGCCGGCATGTTG TGTCACTGGGGGTCTGCACACGGACATCGGCCGGCATGTTG < 41bp 0.799166050543602 0.580449893608526 0.82075894 0.36401242 prediction 0.437432313870152 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671547 chr19:49671550 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_82860 0 0 3 HNRNPM POSTAR2 ENCODE chr19:49671519-49671613
64251 chr10 74886457 74886457 1 + C T UCEC 74886454 + 74886434 74886474 41 AAAGTGTGGAAGAGACCATCCGCCGAGAAGTTGCAGAAGAG AAAGTGTGGAAGAGACCATCCGCTGAGAAGTTGCAGAAGAG < 41bp 0.721660217684655 0.502946358319217 0.14249209 0.089674085 prediction 0.437427718730876 Functional Loss - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74886454 chr10:74886457 stopgain 0.190 1 24 hm5C_associated_SNPs_82861 0 0 2 PPIG POSTAR2 ENCODE chr10:74886439-74886554
64251 chr18 8825125 8825125 1 + C T COAD 8825123 + 8825103 8825143 41 GTGCGCAGGGTCGACAGCATCACGGCGGCAGGTGGTGAGGG GTGCGCAGGGTCGACAGCATCATGGCGGCAGGTGGTGAGGG < 41bp 0.828512146320266 0.609802443075118 0.90908587 0.90778893 prediction 0.437419406490295 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8825123 chr18:8825125 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_82866 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:8825119-8825157
64251 chr16 4745048 4745048 1 + G A UCEC 4745045 + 4745025 4745065 41 CTGAGCAACGCCTTCGTGAGCACGGCTAAGTGCCAGCTCCT CTGAGCAACGCCTTCGTGAGCACAGCTAAGTGCCAGCTCCT < 41bp 0.785742557792727 0.567035247282091 0.81575334 0.36753044 prediction 0.437414621021272 Functional Loss - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4745045 chr16:4745048 nonsynonymous SNV 0.409 0 24 hm5C_associated_SNPs_82870 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:4745047-4745048
64251 chr2 27259581 27259581 1 + G A UCEC 27259578 + 27259558 27259598 41 CTTTTACCCCTGCAGTGTGGCTGGGGATCATGCTGCCTGTG CTTTTACCCCTGCAGTGTGGCTGAGGATCATGCTGCCTGTG < 41bp 0.810715506515345 0.592009244101087 0.44403985 0.23181647 prediction 0.437412524828514 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27259578 chr2:27259581 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_82871 0 0 12 BUD13 POSTAR2 ENCODE chr2:27259560-27259597
64251 chr1 76199277 76199277 1 + A C rs74090726 76199276 + 76199256 76199296 41 AGAATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTG AGAATTGGCTTATGGATGTACCGGGGTTCAGACTGCTATTG < 41bp 0.790551534606936 0.57184538564869 0.89408123 0.91911995 prediction 0.437412297916492 Functional Loss - ACADM ENSG00000117054 CDS Human protein_coding chr1:76199276 chr1:76199277 synonymous SNV . 0 22 hm5C_associated_SNPs_82872 3 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:76199216-76199299
64251 chr1 162467810 162467810 1 + C T COAD 162467808 + 162467788 162467828 41 CCGATGGCGGGATCCGGCTGCGCCTGGGGCGCGGAGCCGCC CCGATGGCGGGATCCGGCTGCGTCTGGGGCGCGGAGCCGCC < 41bp 0.718704194449824 0.472667563611258 0.64415956 0.6945323 prediction 0.437408388899648 Functional Loss - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162467808 chr1:162467810 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_82873 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:162467780-162467811
64251 chr3 183860628 183860628 1 + G C rs111933069 183860624 + 183860604 183860644 41 AAGTGAGCAAAGTATGGATTCTGAGGAGCCGGACAGCCGGG AAGTGAGCAAAGTATGGATTCTGACGAGCCGGACAGCCGGG < 41bp 0.71869777422711 0.420753080206175 0.2866459 0.13157138 prediction 0.437395548454219 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860624 chr3:183860628 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_82877 0 0 23 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183860572-183860663
64251 chr13 113973918 113973918 1 + C T UCEC 113973915 + 113973895 113973935 41 GCGGCACCAACGGGACCTGCCTGCTGGCCAGCATGGGGCTG GCGGCACCAACGGGACCTGCCTGTTGGCCAGCATGGGGCTG < 41bp 0.736437101261173 0.517742396215804 0.06610367 0.069928885 prediction 0.437389410090738 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113973915 chr13:113973918 synonymous SNV . 0 24 hm5C_associated_SNPs_82878 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:113973879-113973924
64251 chr12 69993770 69993770 1 + C T HNSC 69993767 + 69993747 69993787 41 ATTCTGCGTGTGGACAACATCATCAAAGCGGCACCCAGGTA ATTCTGCGTGTGGACAACATCATTAAAGCGGCACCCAGGTA < 41bp 0.724391050137219 0.505696649882754 0.1548852 0.22671953 prediction 0.437388800508931 Functional Loss - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69993767 chr12:69993770 synonymous SNV . 0 24 hm5C_associated_SNPs_82879 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69993668-69993782
64251 chr1 94016590 94016590 1 + C T UCEC 94016588 + 94016568 94016608 41 AGGTGACGGATGGACAAGAGCTCGGAGACAGAACGGTGAAG AGGTGACGGATGGACAAGAGCTTGGAGACAGAACGGTGAAG < 41bp 0.718687231732382 0.450605616827253 0.18660006 0.24102053 prediction 0.437374463464764 Functional Loss - FNBP1L ENSG00000137942 CDS Human protein_coding chr1:94016588 chr1:94016590 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_82883 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:94016566-94016602
64251 chrX 30268617 30268617 1 + C T LUSC 30268615 + 30268595 30268635 41 CCTGACCACAGCCATCATGCCTCGGGGTCAGAAGAGTAAGC CCTGACCACAGCCATCATGCCTTGGGGTCAGAAGAGTAAGC < 41bp 0.824977380642287 0.606290670855083 0.28119823 0.13740945 prediction 0.437373419574408 Functional Loss - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30268615 chrX:30268617 nonsynonymous SNV 0.930 3 23 hm5C_associated_SNPs_82885 0 0 2 DDX3X POSTAR2 ENCODE chrX:30268550-30268653
64251 chr6 26217407 26217407 1 + A C PRAD 26217406 + 26217386 26217426 41 GAGATCTTAGAGCTAGCTGGCAACGCGGCTCGCGACAATAA GAGATCTTAGAGCTAGCTGGCCACGCGGCTCGCGACAATAA < 41bp 0.718664146953996 0.478931311949199 0.33585575 0.17585263 prediction 0.437328293907991 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217406 chr6:26217407 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_82895 0 0 4 DDX24 POSTAR2 ENCODE chr6:26217392-26217431
64251 chr15 25333188 25333188 1 + G A rs539420066 25333185 + 25333165 25333205 41 TTTGTTCTTGAGTCCTTGTTCTGGGTTCTCAGGTCCCACGG TTTGTTCTTGAGTCCTTGTTCTGAGTTCTCAGGTCCCACGG < 41bp 0.718638911851774 0.475309870113348 0.88997406 0.5495688 prediction 0.437277823703549 Functional Loss - SNHG14 ENSG00000261069 ncRNA_exonic Human lincRNA chr15:25333185 chr15:25333188 . . 0 24 hm5C_associated_SNPs_82906 0 0 5 DGCR8 POSTAR2 ENCODE chr15:25333168-25333198
64251 chr6 47563658 47563658 1 + G A SKCM 47563655 + 47563635 47563675 41 GCAGCTCCACAAGTCCCACCCAAGAAACCTACTCCACCTAC GCAGCTCCACAAGTCCCACCCAAAAAACCTACTCCACCTAC < 41bp 0.757536237254028 0.538903617156095 0.5318167 0.13895401 prediction 0.437265240195866 Functional Loss - CD2AP ENSG00000198087 CDS Human protein_coding chr6:47563655 chr6:47563658 synonymous SNV . 0 24 hm5C_associated_SNPs_82908 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr6:47563638-47563676
64251 chr8 27516431 27516431 1 + C T SKCM 27516429 + 27516409 27516449 41 CAGACGAGGAGACCCTGACCCTCCAGAAGATTGTCACCGAC CAGACGAGGAGACCCTGACCCTTCAGAAGATTGTCACCGAC < 41bp 0.878711558704438 0.660088415372599 0.9407378 0.12844968 prediction 0.437246286663678 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516429 chr8:27516431 synonymous SNV . 0 23 hm5C_associated_SNPs_82912 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27516425-27516499
64251 chr22 19119087 19119087 1 - C T UCEC 19119090 - 19119070 19119110 41 AGTTGCCAGGATGTCCATCTCCCGAGGAAGGAATCTCTCCA AGTTGCCAGGATGTCCATCTCCCAAGGAAGGAATCTCTCCA < 41bp 0.734216506522991 0.515597485471916 0.95593226 0.46797803 prediction 0.437238042102151 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119090 chr22:19119087 nonsynonymous SNV 0.982 5 24 hm5C_associated_SNPs_82913 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:19119039-19119087
64251 chr10 135165758 135165758 1 + G A UCEC 135165755 + 135165735 135165775 41 ATGTGCTTGTCCCTAGGCACCAAGGCCTGGATGGAGACCGA ATGTGCTTGTCCCTAGGCACCAAAGCCTGGATGGAGACCGA < 41bp 0.749142629216942 0.530527081074754 0.24685475 0.08381593 prediction 0.437231096284375 Functional Loss - PRAP1 ENSG00000165828;ENSG00000198546 CDS Human other chr10:135165755 chr10:135165758 synonymous SNV . 0 24 hm5C_associated_SNPs_82916 0 0 2 SND1 POSTAR2 ENCODE chr10:135165749-135165835
64251 chr4 944293 944293 1 + G C LGG 944289 + 944269 944309 41 TTTCTCATCGTGACAGTGGCCTGGGCAGCACACACAAGGTG TTTCTCATCGTGACAGTGGCCTGGCCAGCACACACAAGGTG < 41bp 0.748459540291809 0.529846211901033 0.28142208 0.23707193 prediction 0.437226656781551 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:944289 chr4:944293 nonsynonymous SNV 0.950 3 25 hm5C_associated_SNPs_82918 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:944265-944305
64251 chr19 5110733 5110733 1 + C T STAD 5110731 + 5110711 5110751 41 TGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCG TGGAAGCAGGGCAAGGACCTCATGGTGCTGGACCACACGCG < 41bp 0.820147021327286 0.601536579034583 0.88342977 0.84728837 prediction 0.437220884585407 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5110731 chr19:5110733 nonsynonymous SNV 0.964 1 23 hm5C_associated_SNPs_82922 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:5110726-5110744
64251 chr19 49841252 49841252 1 + C T OV 49841250 + 49841230 49841270 41 GGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA GGCACCAACCCCGAGGAGACCGTGGCCGAGGAGAGCTGGGA < 41bp 0.718606495720191 0.450225582683035 0.3478775 0.2119312 prediction 0.437212991440382 Functional Loss - CD37 ENSG00000104894 CDS Human protein_coding chr19:49841250 chr19:49841252 nonsynonymous SNV 0.157 2 23 hm5C_associated_SNPs_82925 0 0 1 SND1 POSTAR2 ENCODE chr19:49841179-49841255
64251 chr19 49841253 49841253 1 + G A UCEC 49841250 + 49841230 49841270 41 GGCACCAACCCCGAGGAGACCGCGGCCGAGGAGAGCTGGGA GGCACCAACCCCGAGGAGACCGCAGCCGAGGAGAGCTGGGA < 41bp 0.718606495720191 0.474911021020271 0.3478775 0.2139605 prediction 0.437212991440382 Functional Loss - CD37 ENSG00000104894 CDS Human protein_coding chr19:49841250 chr19:49841253 synonymous SNV . 0 24 hm5C_associated_SNPs_82926 0 0 1 SND1 POSTAR2 ENCODE chr19:49841179-49841255
64251 chr8 61497312 61497312 1 + G A UCEC 61497309 + 61497289 61497329 41 ACATTCAACCACTTGACAACCTGGTTAGAAGATGCCCGCCA ACATTCAACCACTTGACAACCTGATTAGAAGATGCCCGCCA < 41bp 0.718599156080701 0.493452905919619 0.28848615 0.09143224 prediction 0.437198312161402 Functional Loss - RAB2A ENSG00000104388 CDS Human protein_coding chr8:61497309 chr8:61497312 stopgain 1.000 1 24 hm5C_associated_SNPs_82929 0 0 1 IGF2BP1 POSTAR2 ENCODE chr8:61497281-61497365
64251 chr19 18451435 18451435 1 + A C rs570498910 18451431 + 18451411 18451451 41 GCGCGGCCGAGAGGCTGCAGCGGCAGCAGCTGTCGCGCCAG GCGCGGCCGAGAGGCTGCAGCGGCCGCAGCTGTCGCGCCAG < 41bp 0.912512199250781 0.693913321226853 0.91154474 0.90170383 prediction 0.437197756047856 Functional Loss - PGPEP1 ENSG00000130517 UTR5 Human protein_coding chr19:18451431 chr19:18451435 . . 0 25 hm5C_associated_SNPs_82930 0 0 4 DDX3X POSTAR2 ENCODE chr19:18451399-18451532
64251 chr19 42791810 42791810 1 + G A UCEC 42791807 + 42791787 42791827 41 CAGGACAACCGGACCGTCAGCAAGATCCTGGGCGAGTGGTG CAGGACAACCGGACCGTCAGCAAAATCCTGGGCGAGTGGTG < 41bp 0.718598838903499 0.472718405561256 0.7624353 0.35320783 prediction 0.437197677806999 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791807 chr19:42791810 synonymous SNV . 0 24 hm5C_associated_SNPs_82931 0 0 3 NOP58 POSTAR2 GSE43666,GSM1067862 chr19:42791776-42791812
64251 chr2 237489756 237489756 1 + C T SKCM 237489753 + 237489733 237489773 41 CTGATCGGCATGGAGCTGGTCTCCGTTGTCTTGGGCTTTGC CTGATCGGCATGGAGCTGGTCTCTGTTGTCTTGGGCTTTGC < 41bp 0.754398184636708 0.535809335449668 0.37160403 0.15512192 prediction 0.43717769837408 Functional Loss - ACKR3 ENSG00000144476 CDS Human protein_coding chr2:237489753 chr2:237489756 synonymous SNV . 0 24 hm5C_associated_SNPs_82937 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:237489740-237489760
64251 chr13 21751352 21751352 1 + G T COAD 21751349 + 21751329 21751369 41 CTCGACCATCTCAATGTCACCAAGAAATGGTCCTAATCCTG CTCGACCATCTCAATGTCACCAATAAATGGTCCTAATCCTG < 41bp 0.718579722253406 0.323931648181637 0.2463009 0.027073592 prediction 0.437159444506813 Functional Loss - MRPL57 ENSG00000173141 CDS Human protein_coding chr13:21751349 chr13:21751352 nonsynonymous SNV 0.072 3 24 hm5C_associated_SNPs_82943 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr13:21751340-21751420
64251 chr7 102040048 102040048 1 + C T OV 102040045 + 102040025 102040065 41 TCCACGTGTACAGACATCTGCGCCGGAGAGAATATCAGCGA TCCACGTGTACAGACATCTGCGCTGGAGAGAATATCAGCGA < 41bp 0.738340391034199 0.519765649682542 0.35615945 0.358868 prediction 0.437149482703315 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102040045 chr7:102040048 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_82946 0 0 16 NOP58 POSTAR2 GSE43666,GSM1067862 chr7:102040032-102040070
64251 chr17 42152707 42152707 1 + C T COAD 42152705 + 42152685 42152725 41 CCTGGGCTGGCTGATGACTCCCCGAGTGCCTATGGAGCGGG CCTGGGCTGGCTGATGACTCCCTGAGTGCCTATGGAGCGGG < 41bp 0.854143271319844 0.635568831351403 0.15548879 0.039334297 prediction 0.437148879936881 Functional Loss - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152705 chr17:42152707 stopgain 0.986 0 23 hm5C_associated_SNPs_82947 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42152683-42152708
64251 chr2 182322416 182322416 1 + G A BLCA 182322413 + 182322393 182322433 41 AGCGAGGCGCGAACCCGGCCCCCGAAGGGCCGCCGTCCGGG AGCGAGGCGCGAACCCGGCCCCCAAAGGGCCGCCGTCCGGG < 41bp 0.812730369549996 0.594156029912601 0.0847069 0.18812934 prediction 0.437148679274789 Functional Loss - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182322413 chr2:182322416 nonsynonymous SNV 0.013 2 24 hm5C_associated_SNPs_82948 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:182322416-182322417
64251 chr5 14607538 14607538 1 + C T UCEC 14607535 + 14607515 14607555 41 GCTCGAATGTGTTTGGAAAACTACGGAAATATGTGGAATTA GCTCGAATGTGTTTGGAAAACTATGGAAATATGTGGAATTA < 41bp 0.731496907501029 0.512928631557473 0.045339614 0.039777756 prediction 0.437136551887111 Functional Loss - FAM105A ENSG00000145569 CDS Human protein_coding chr5:14607535 chr5:14607538 nonsynonymous SNV 0.952 4 24 hm5C_associated_SNPs_82950 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:14607507-14607547
64251 chr1 24077751 24077751 1 + A C UCS 24077750 + 24077730 24077770 41 AAGGCCACAGCAATGCCTTTCAGGACAGACTCGGGGCCAGC AAGGCCACAGCAATGCCTTTCCGGACAGACTCGGGGCCAGC < 41bp 0.838613881857848 0.620049875725435 0.87465143 0.76060957 prediction 0.437128012264827 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077750 chr1:24077751 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_82953 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr1:24077739-24077771
64251 chrX 47101903 47101903 1 + G A BLCA 47101900 + 47101880 47101920 41 TGTGTGGCTCTGTCCAAACACACGGGCATCTCGCCAGAGAG TGTGTGGCTCTGTCCAAACACACAGGCATCTCGCCAGAGAG < 41bp 0.822950055569425 0.604401218674331 0.3230713 0.12384564 prediction 0.437097673790188 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47101900 chrX:47101903 synonymous SNV . 0 24 hm5C_associated_SNPs_82962 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:47101891-47101916
64251 chr8 81399152 81399152 1 + C T rs201355421 81399150 + 81399130 81399170 41 AATAACGCTGGCGGGGAGGCCTCAGCTTGGCCTCCGCAGCC AATAACGCTGGCGGGGAGGCCTTAGCTTGGCCTCCGCAGCC < 41bp 0.718541850205237 0.472567880296085 0.5459228 0.24847957 prediction 0.437083700410475 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399150 chr8:81399152 nonsynonymous SNV 0.917 1 23 hm5C_associated_SNPs_82965 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr8:81399126-81399154
64251 chr12 14634051 14634051 1 + C T LUAD 14634048 + 14634028 14634068 41 TTATACAACTCTTCCTGCACCACCAGCTCAGGCTCCCTTGC TTATACAACTCTTCCTGCACCACTAGCTCAGGCTCCCTTGC < 41bp 0.754032685862331 0.535501787274023 0.04974875 0.040527165 prediction 0.437061797176615 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14634048 chr12:14634051 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_82968 0 0 7 MOV10 POSTAR2 GSE37524,GSM921128 chr12:14634026-14634053
64251 chr19 12920991 12920991 1 + C T LGG 12920989 + 12920969 12921009 41 GCCAAAGCAGATGCCCTCTACCCGGTGGTTAGTGCTGCCAG GCCAAAGCAGATGCCCTCTACCTGGTGGTTAGTGCTGCCAG < 41bp 0.718521231957024 0.445484698794457 0.2655737 0.12996298 prediction 0.437042463914048 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12920989 chr19:12920991 nonsynonymous SNV 0.010 5 23 hm5C_associated_SNPs_82969 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:12920981-12921010
64251 chr16 56692606 56692606 1 + T C CESC 56692605 + 56692585 56692625 41 AGGTGTCTCCTGCACCTGCGCTGGTTCCTGCAAGTGCAAAG AGGTGTCTCCTGCACCTGCGCCGGTTCCTGCAAGTGCAAAG < 41bp 0.771786969628458 0.553273395166269 0.11284509 0.0643006 prediction 0.437027148924377 Functional Loss - MT1F ENSG00000198417 CDS Human protein_coding chr16:56692605 chr16:56692606 synonymous SNV . 0 22 hm5C_associated_SNPs_82977 0 0 5 BUD13 POSTAR2 ENCODE chr16:56692580-56692629
64251 chr10 31750115 31750115 1 + G T ACC 31750113 + 31750093 31750133 41 AACAGACCAGACAGTGTTACCAGGGAGGAGCAGTGAAAGAG AACAGACCAGACAGTGTTACCATGGAGGAGCAGTGAAAGAG < 41bp 0.817234639328288 0.598725503681296 0.91052276 0.8551041 prediction 0.437018271293983 Functional Loss - ZEB1 ENSG00000148516 CDS Human protein_coding chr10:31750113 chr10:31750115 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_82978 0 0 1 GRWD1 POSTAR2 ENCODE chr10:31750002-31750168
64251 chr17 27182094 27182094 1 + G C COAD 27182093 + 27182073 27182113 41 CGGGGCTAGGCTTGTTCAATCGGTGTTAAGAGTCTGGCAGG CGGGGCTAGGCTTGTTCAATCCGTGTTAAGAGTCTGGCAGG < 41bp 0.876829250121345 0.658323634579105 0.7282261 0.4104732 prediction 0.437011231084479 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27182093 chr17:27182094 synonymous SNV . 0 22 hm5C_associated_SNPs_82981 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr17:27182072-27182097
64251 chr9 37424918 37424918 1 + G T LUAD 37424915 + 37424895 37424935 41 AGCGAGGTGTGGCGGGGGCCCACGGCCTGCTCTGCCTCCTC AGCGAGGTGTGGCGGGGGCCCACTGCCTGCTCTGCCTCCTC < 41bp 0.93296207636009 0.714461121608609 0.8859497 0.34376907 prediction 0.437001909502962 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424915 chr9:37424918 nonsynonymous SNV 0.875 5 24 hm5C_associated_SNPs_82983 0 0 8 DDX24 POSTAR2 ENCODE chr9:37424835-37424927
64251 chr6 158487648 158487648 1 + G A rs144542416 158487645 + 158487625 158487665 41 CTGCTCGACTCGCCCCAGCTCTCGGGAGCTACCGACTCCCA CTGCTCGACTCGCCCCAGCTCTCAGGAGCTACCGACTCCCA < 41bp 0.781481540611297 0.562982289801155 0.04030192 0.009912878 prediction 0.436998501620284 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158487645 chr6:158487648 synonymous SNV . 0 24 hm5C_associated_SNPs_82985 0 0 8 EFTUD2 POSTAR2 ENCODE chr6:158487613-158487687
64251 chr1 71512812 71512812 1 - G A LIHC 71512814 - 71512794 71512834 41 TCCTCGTTGTTCATCGCCAGCGCCATGGCCGTCGAGCGGGC TCCTCGTTGTTCATCGCCAGCGTCATGGCCGTCGAGCGGGC < 41bp 0.811921836324623 0.593423061451617 0.24826014 0.18875724 prediction 0.436997549746011 Functional Loss - PTGER3 ENSG00000050628 CDS Human protein_coding chr1:71512814 chr1:71512812 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_82987 0 0 2 RBM15 POSTAR2 ENCODE chr1:71512766-71512838
64251 chr17 42636535 42636535 1 + G A BLCA 42636532 + 42636512 42636552 41 TTCCGCGAGCACTGGGAGCGCTCGTGGGTGAGCCAGCACTG TTCCGCGAGCACTGGGAGCGCTCATGGGTGAGCCAGCACTG < 41bp 0.785773360472347 0.56728101124971 0.36807287 0.24541852 prediction 0.436984698445274 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636532 chr17:42636535 synonymous SNV . 0 24 hm5C_associated_SNPs_82993 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:42636509-42636551
64251 chr5 137681298 137681298 1 + G T LUAD 137681296 + 137681276 137681316 41 TGGACTTTGACAAGATGAATCAGGTGGGACCAGCAAGACTA TGGACTTTGACAAGATGAATCATGTGGGACCAGCAAGACTA < 41bp 0.7184836634991 0.372677223912542 0.80733705 0.33278453 prediction 0.436967326998201 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137681296 chr5:137681298 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_82996 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221667 chr5:137681280-137681300
64251 chr7 98985783 98985783 1 + G T OV 98985781 + 98985761 98985801 41 TGGTCATCCTGCGGATCAACCGGGCTGCCCGCTGCGTGCGC TGGTCATCCTGCGGATCAACCGTGCTGCCCGCTGCGTGCGC < 41bp 0.91410648853881 0.695626383706029 0.9307423 0.51723766 prediction 0.436960209665562 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985781 chr7:98985783 synonymous SNV . 0 23 hm5C_associated_SNPs_82998 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985778-98985811
64251 chr4 39114803 39114803 1 + G A COAD 39114800 + 39114780 39114820 41 TGCTGTATGCTATAGGGGGGCACGATGCTCCCGCATCCAAC TGCTGTATGCTATAGGGGGGCACAATGCTCCCGCATCCAAC < 41bp 0.718479791530347 0.49094295880708 0.06368661 0.07389158 prediction 0.436959583060695 Functional Loss - KLHL5 ENSG00000109790 CDS Human protein_coding chr4:39114800 chr4:39114803 nonsynonymous SNV 0.013 4 24 hm5C_associated_SNPs_83000 0 0 1 FXR2 POSTAR2 ENCODE chr4:39114708-39114845
64251 chr1 12071702 12071702 1 + G A rs111806773 12071699 + 12071679 12071719 41 CATGTGGGCTCCCCCAGGGGCACGTGTGGCTCCTGCCCCCT CATGTGGGCTCCCCCAGGGGCACATGTGGCTCCTGCCCCCT < 41bp 0.718474767946355 0.47232397299474 0.17740709 0.13320422 prediction 0.43694953589271 Functional Loss - MFN2 ENSG00000116688 UTR3 Human protein_coding chr1:12071699 chr1:12071702 . . 0 24 hm5C_associated_SNPs_83001 0 0 2 EIF3H POSTAR2 ENCODE chr1:12071677-12071721
64251 chrX 67938119 67938119 1 + T C UCEC 67938118 + 67938098 67938138 41 GCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAAGTCCA GCCCATGGAGAGTCCCCAGCCCGGGCCCAGGCTGAAGTCCA < 41bp 0.73636431467959 0.517890855013419 0.6588655 0.84713185 prediction 0.436946919332342 Functional Loss - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67938118 chrX:67938119 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_83002 0 0 2 FMR1 POSTAR2 ENCODE chrX:67938100-67938174
64251 chr10 121191015 121191015 1 + C T CESC 121191013 + 121190993 121191033 41 CCCTCAATGAGAAGCAGATCCTCGAGAAGGTCAACAGTCAG CCCTCAATGAGAAGCAGATCCTTGAGAAGGTCAACAGTCAG < 41bp 0.862272450390589 0.643799557593385 0.8770423 0.32482478 prediction 0.436945785594408 Functional Loss - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121191013 chr10:121191015 synonymous SNV . 0 23 hm5C_associated_SNPs_83003 0 0 1 PRPF8 POSTAR2 ENCODE chr10:121191012-121191084
64251 chr16 640349 640349 1 + G A COAD 640346 + 640326 640366 41 ACTACCTGCTCAAGTTCCTGCTGGTGGGCGACAGCGACGTG ACTACCTGCTCAAGTTCCTGCTGATGGGCGACAGCGACGTG < 41bp 0.71846704014168 0.479685956632847 0.31864822 0.22334689 prediction 0.43693408028336 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:640346 chr16:640349 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_83006 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:640348-640349
64251 chr16 57416566 57416566 1 + G A UCEC 57416563 + 57416543 57416583 41 ATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTG ATGGGTCCCGTGCCAGCGCACACAGATGCCTTCCAGGACTG < 41bp 0.820371895503486 0.601906527187816 0.42836136 0.15971023 prediction 0.43693073663134 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416563 chr16:57416566 synonymous SNV . 0 24 hm5C_associated_SNPs_83007 0 0 4 RPS3 POSTAR2 ENCODE chr16:57416482-57416567
64251 chr19 50102972 50102972 1 + C T UCEC 50102970 + 50102950 50102990 41 ATGAGGAGCTGAAGCGGAACCTCGAGACGCTGCCCTCCTTC ATGAGGAGCTGAAGCGGAACCTTGAGACGCTGCCCTCCTTC < 41bp 0.858456610843746 0.639996517934833 0.9116707 0.6337552 prediction 0.436920185817826 Functional Loss - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50102970 chr19:50102972 synonymous SNV . 0 23 hm5C_associated_SNPs_83011 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:50102949-50102987
64251 chr2 27016113 27016113 1 + G A LGG 27016110 + 27016090 27016130 41 CCCAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTG CCCAAAGGATGTGCAACTGGCCCAGAGGATCCGGGGCCTTG < 41bp 0.718458277522344 0.477430742614594 0.45103487 0.2801103 prediction 0.436916555044688 Functional Loss - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016110 chr2:27016113 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_83013 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:27016094-27016116
64251 chr2 27016112 27016112 1 + C T LUAD 27016110 + 27016090 27016130 41 CCCAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTG CCCAAAGGATGTGCAACTGGCCTGGAGGATCCGGGGCCTTG < 41bp 0.718458277522344 0.450025200626152 0.45103487 0.29294795 prediction 0.436916555044688 Functional Loss - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016110 chr2:27016112 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_83014 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:27016094-27016116
64251 chr14 89063104 89063104 1 + C T UCEC 89063102 + 89063082 89063122 41 TCAACAGAGGCAATTATTATCCCGACTGCAAATCGACCCAG TCAACAGAGGCAATTATTATCCTGACTGCAAATCGACCCAG < 41bp 0.718448961375633 0.441128353721005 0.30376524 0.28277922 prediction 0.436897922751266 Functional Loss - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89063102 chr14:89063104 stopgain 1.000 1 23 hm5C_associated_SNPs_83018 0 0 3 DDX24 POSTAR2 ENCODE chr14:89063103-89063153
64251 chr14 21464757 21464757 1 + C T HNSC 21464755 + 21464735 21464775 41 GGTCTCCAGAGGAGGCTCATCGCTGGCCCCGTATCACTCAG GGTCTCCAGAGGAGGCTCATCGTTGGCCCCGTATCACTCAG < 41bp 0.832934869888387 0.614486874342237 0.31299013 0.27067322 prediction 0.436895991092301 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464755 chr14:21464757 synonymous SNV . 0 23 hm5C_associated_SNPs_83019 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:21464728-21464765
64251 chr7 55974028 55974028 1 + C T rs2135118 55974026 + 55974006 55974046 41 TCTTTGAAAGTGGCGCTTGGCACCAGCATGAACTCCCCATC TCTTTGAAAGTGGCGCTTGGCATCAGCATGAACTCCCCATC < 41bp 0.774987402481009 0.556540636180524 0.1132355 0.058421373 prediction 0.436893532600971 Functional Loss - ZNF713 ENSG00000178665;ENSG00000249773 UTR5 Human other chr7:55974026 chr7:55974028 . . 0 23 hm5C_associated_SNPs_83022 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:55974011-55974049
64251 chr1 17270753 17270753 1 + G A CESC 17270750 + 17270730 17270770 41 GGACGCAGTGCAGGATGGCGCGCGGGTGCGCCGGGAGCTTG GGACGCAGTGCAGGATGGCGCGCAGGTGCGCCGGGAGCTTG < 41bp 0.793677533159903 0.575238311865083 0.8380375 0.7779454 prediction 0.43687844258964 Functional Loss - CROCC ENSG00000058453 CDS Human protein_coding chr1:17270750 chr1:17270753 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_83026 0 0 2 PPIG POSTAR2 ENCODE chr1:17270728-17270780
64251 chr19 50549441 50549441 1 + G A rs150885598 50549438 + 50549418 50549458 41 GCAGCAAATACCTAACTCAGCACGAGAGGATTCACACCAGG GCAGCAAATACCTAACTCAGCACAAGAGGATTCACACCAGG < 41bp 0.782902797556072 0.564463730872015 0.22297022 0.13790342 prediction 0.436878133368113 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549438 chr19:50549441 nonsynonymous SNV 0.456 0 24 hm5C_associated_SNPs_83028 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50549441-50549462
64251 chr8 8093397 8093397 1 + G A rs143149047 8093394 + 8093374 8093414 41 GCCATCATCTCCCACAGCACCACGGGTCTGGTCACATGGGA GCCATCATCTCCCACAGCACCACAGGTCTGGTCACATGGGA < 41bp 0.718433831303849 0.491985100324072 0.33365428 0.22371173 prediction 0.436867662607698 Functional Loss - FAM86B3P ENSG00000173295 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr8:8093394 chr8:8093397 . . 0 24 hm5C_associated_SNPs_83031 0 0 1 BUD13 POSTAR2 ENCODE chr8:8093331-8093403
64251 chr19 11168977 11168977 1 + C T BLCA 11168975 + 11168955 11168995 41 GGTCTTCATCCAGCTGCCCTCGCGAAAGGAGCTGCCCGAGT GGTCTTCATCCAGCTGCCCTCGTGAAAGGAGCTGCCCGAGT < 41bp 0.837259863349277 0.61882897443177 0.918229 0.88976276 prediction 0.436861777835013 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11168975 chr19:11168977 stopgain 0.630 1 23 hm5C_associated_SNPs_83033 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:11168977-11168978
64251 chr10 105169541 105169541 1 + G T LUAD 105169538 + 105169518 105169558 41 GCACCTGGATCCCAAGAAAGCTGGAACATATTTCTCAAATC GCACCTGGATCCCAAGAAAGCTGTAACATATTTCTCAAATC < 41bp 0.718428960212513 0.325940955812965 0.06482029 0.081483275 prediction 0.436857920425026 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105169538 chr10:105169541 nonsynonymous SNV 0.171 1 24 hm5C_associated_SNPs_83034 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:105169537-105169560
64251 chr17 36508910 36508910 1 + G A rs375541134 36508907 + 36508887 36508927 41 TCTGCGGGCCGGGAGCTGGACGCGGGGAGGTGAGACCGGCC TCTGCGGGCCGGGAGCTGGACGCAGGGAGGTGAGACCGGCC < 41bp 0.79473883649105 0.576313018444055 0.89698666 0.86882675 prediction 0.43685163609399 Functional Loss - SOCS7 ENSG00000174111 CDS Human other chr17:36508907 chr17:36508910 synonymous SNV . 0 24 hm5C_associated_SNPs_83038 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:36508878-36508914
64251 chr2 233708863 233708863 1 + G A UCEC 233708860 + 233708840 233708880 41 GTCAGCAAACCTTCAGGTACCACGAAATCTCTTCTGGAGAT GTCAGCAAACCTTCAGGTACCACAAAATCTCTTCTGGAGAT < 41bp 0.735182955006648 0.516763371433679 0.10280648 0.18124294 prediction 0.436839167145938 Functional Loss - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233708860 chr2:233708863 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_83041 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:233708860-233708880
64251 chr6 27783060 27783060 1 + G A GBM 27783057 + 27783037 27783077 41 GCGTATCGCCGGAGAAGCGTCACGCCTGGCGCATTACAACA GCGTATCGCCGGAGAAGCGTCACACCTGGCGCATTACAACA < 41bp 0.733955493516201 0.515540948019441 0.036134154 0.040185183 prediction 0.436829090993519 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783057 chr6:27783060 nonsynonymous SNV 0.651 0 24 hm5C_associated_SNPs_83044 0 0 1 GRWD1 POSTAR2 ENCODE chr6:27783035-27783064
64251 chr17 72926497 72926497 1 + C T SKCM 72926495 + 72926475 72926515 41 GAGTACAGCCTCTTCGCCTCCACCATGCTGTATGTCATGTG GAGTACAGCCTCTTCGCCTCCATCATGCTGTATGTCATGTG < 41bp 0.718412056826789 0.418503123245181 0.063444436 0.034198612 prediction 0.436824113653578 Functional Loss - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72926495 chr17:72926497 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_83046 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr17:72926483-72926499
64251 chr2 241516094 241516094 1 + G A rs34344571 241516091 + 241516071 241516111 41 CCTCTGGACCAGGCAGCTGCCTCGGCCAGCGCCATTGACAT CCTCTGGACCAGGCAGCTGCCTCAGCCAGCGCCATTGACAT < 41bp 0.718411130632277 0.495086849629074 0.33149678 0.10336515 prediction 0.436822261264555 Functional Loss - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241516091 chr2:241516094 synonymous SNV . 0 24 hm5C_associated_SNPs_83047 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:241516080-241516105
64251 chr17 7490807 7490807 1 + G C SKCM 7490806 + 7490786 7490826 41 TCTCTCTGCAACGGCCTCATCGCCGCCCAGCTGCTCTTCTA TCTCTCTGCAACGGCCTCATCCCCGCCCAGCTGCTCTTCTA < 41bp 0.878589131096 0.660181543035396 0.64347136 0.1850017 prediction 0.436815176121208 Functional Loss - MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7490806 chr17:7490807 nonsynonymous SNV 0.891 1 22 hm5C_associated_SNPs_83048 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7490773-7490811
64251 chr8 87443710 87443710 1 + G T UCEC 87443707 + 87443687 87443727 41 AACAACCCAGTGGGAAGATCCAAGAACTCAAGGGTATGTAT AACAACCCAGTGGGAAGATCCAATAACTCAAGGGTATGTAT < 41bp 0.718404846716502 0.338546462324624 0.070667505 0.0135940015 prediction 0.436809693433004 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87443707 chr8:87443710 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83052 0 0 2 GRWD1 POSTAR2 ENCODE chr8:87443691-87443714
64251 chr11 67049366 67049366 1 + G A COAD 67049363 + 67049343 67049383 41 GACATGCGCTTCTATGCGGCCGAGATCATCCTGGGCCTGGA GACATGCGCTTCTATGCGGCCGAAATCATCCTGGGCCTGGA < 41bp 0.783691556467067 0.565288398440945 0.8856733 0.8151206 prediction 0.436806316052243 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67049363 chr11:67049366 synonymous SNV . 0 24 hm5C_associated_SNPs_83054 0 0 2 GRWD1 POSTAR2 ENCODE chr11:67049361-67049422
64251 chr9 96305745 96305745 1 + C T rs114775999 96305742 + 96305722 96305762 41 ACTCACCTCATGGTGCTCTGCTGCGTCTTACGGTGGGTGCC ACTCACCTCATGGTGCTCTGCTGTGTCTTACGGTGGGTGCC < 41bp 0.724069017043075 0.505673609575189 0.17063418 0.10895407 prediction 0.436790814935772 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96305742 chr9:96305745 synonymous SNV . 0 24 hm5C_associated_SNPs_83060 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:96305718-96305748
64251 chr7 2420210 2420210 1 + G T rs76427867 2420208 + 2420188 2420228 41 GTTTCCACGGTGCCTGTACACAGCCGAGCAGCATTTCCGTT GTTTCCACGGTGCCTGTACACATCCGAGCAGCATTTCCGTT < 41bp 0.718392685479 0.407803211101849 0.40274164 0.25174823 prediction 0.436785370958 Functional Loss - EIF3B ENSG00000106263 UTR3 Human protein_coding chr7:2420208 chr7:2420210 . . 0 23 hm5C_associated_SNPs_83063 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:2420092-2420229
64251 chr17 53237245 53237245 1 + T C HNSC 53237244 + 53237224 53237264 41 GGAGAATGAAGAGGATTGCTCTAGAGAACTCCCCAACCAGA GGAGAATGAAGAGGATTGCTCCAGAGAACTCCCCAACCAGA < 41bp 0.718389330227817 0.482481716672828 0.82330346 0.89675176 prediction 0.436778660455634 Functional Loss - STXBP4 ENSG00000166263 CDS Human protein_coding chr17:53237244 chr17:53237245 synonymous SNV . 0 22 hm5C_associated_SNPs_83065 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:53237227-53237258
64251 chr4 110772947 110772947 1 + A T rs61740116 110772943 + 110772923 110772963 41 ACATGCCCCTTCTGAGGACCCTGGACTTGCACAATAACAAA ACATGCCCCTTCTGAGGACCCTGGTCTTGCACAATAACAAA < 41bp 0.849048274273421 0.630666750195686 0.04270041 0.034514904 prediction 0.436763048155471 Functional Loss - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110772943 chr4:110772947 nonsynonymous SNV 0.982 3 25 hm5C_associated_SNPs_83070 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr4:110772924-110772951
64251 chr7 128489476 128489476 1 + G A LUSC 128489473 + 128489453 128489493 41 GGTGAGGGGAAGGTGACATGCACGGTGTCCACGCCGGATGG GGTGAGGGGAAGGTGACATGCACAGTGTCCACGCCGGATGG < 41bp 0.791354264256541 0.572986014276164 0.20559293 0.044231266 prediction 0.436736499960754 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128489473 chr7:128489476 synonymous SNV . 0 24 hm5C_associated_SNPs_83078 0 0 1 SUB1 POSTAR2 ENCODE chr7:128489474-128489502
64251 chr3 10183748 10183748 1 + C T KIRC 10183746 + 10183726 10183766 41 GGTGAACTCGCGCGAGCCCTCCCAGGTCATCTTCTGCAATC GGTGAACTCGCGCGAGCCCTCCTAGGTCATCTTCTGCAATC < 41bp 0.766124242409312 0.547756061864635 0.08279514 0.055294037 prediction 0.436736361089354 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10183746 chr3:10183748 stopgain 0.998 0 23 hm5C_associated_SNPs_83079 1 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:10183720-10183808
64251 chr16 57504209 57504209 1 + C T UCEC 57504207 + 57504187 57504227 41 CTCAGGCCAAAGAGTGAGTACTCGGAGCTGGATGAGGATGA CTCAGGCCAAAGAGTGAGTACTTGGAGCTGGATGAGGATGA < 41bp 0.718365559715111 0.420263128580571 0.33020824 0.3049333 prediction 0.436731119430222 Functional Loss - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57504207 chr16:57504209 nonsynonymous SNV 0.975 4 23 hm5C_associated_SNPs_83083 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr16:57504195-57504216
64251 chr22 50987887 50987887 1 + G A BLCA 50987884 + 50987864 50987904 41 GCGAACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAG GCGAACAGACGCCTGGACCCCACACGCGCCACTCCCCGCAG < 41bp 0.811063281256038 0.59270206944878 0.24372506 0.27912247 prediction 0.436722423614514 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987884 chr22:50987887 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_83088 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr1 36306901 36306901 1 + C T rs142753498 36306898 + 36306878 36306918 41 CACCCCAGCCGGTACTGTGCCACCGTTCGGGTGCAGACTTC CACCCCAGCCGGTACTGTGCCACTGTTCGGGTGCAGACTTC < 41bp 0.718357906620631 0.497835510408625 0.053008914 0.02887851 prediction 0.436715813241263 Functional Loss - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36306898 chr1:36306901 synonymous SNV . 0 24 hm5C_associated_SNPs_83092 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:36306876-36306902
64251 chr6 43100376 43100376 1 + G A UCEC 43100373 + 43100353 43100393 41 GCTGGTGTCTACACCTGCCACGCGGCCAACCTGGCTGGTCA GCTGGTGTCTACACCTGCCACGCAGCCAACCTGGCTGGTCA < 41bp 0.718343827544575 0.467643116881482 0.17101964 0.01836595 prediction 0.436687655089151 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43100373 chr6:43100376 synonymous SNV . 0 24 hm5C_associated_SNPs_83097 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:43100346-43100379
64251 chr3 52512227 52512227 1 + G A BLCA 52512224 + 52512204 52512244 41 TAAACCTGGCAGGCAACCTCCTAGAGAGTCTGAGTGGCCTG TAAACCTGGCAGGCAACCTCCTAAAGAGTCTGAGTGGCCTG < 41bp 0.761206170289375 0.542862762161246 0.19821557 0.07456729 prediction 0.436686816256257 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52512224 chr3:52512227 nonsynonymous SNV 0.968 1 24 hm5C_associated_SNPs_83099 0 0 1 GRWD1 POSTAR2 ENCODE chr3:52512218-52512282
64251 chr1 38261468 38261468 1 + G T UCEC 38261466 + 38261446 38261486 41 TGATGATAACGGGGAGCCCTCAGATGACCTGGTGCCCGCCA TGATGATAACGGGGAGCCCTCATATGACCTGGTGCCCGCCA < 41bp 0.718327479015691 0.349466221206036 0.93394697 0.18130973 prediction 0.436654958031382 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38261466 chr1:38261468 nonsynonymous SNV 0.986 5 23 hm5C_associated_SNPs_83106 0 0 1 BUD13 POSTAR2 ENCODE chr1:38261439-38261554
64251 chr15 29398931 29398931 1 + C T UCEC 29398929 + 29398909 29398949 41 AATGGCGGCCCGGCTGCCCGCTCGGGGAAGCTGAGCATCGG AATGGCGGCCCGGCTGCCCGCTTGGGGAAGCTGAGCATCGG < 41bp 0.846817342185893 0.628495560395888 0.35019964 0.25763822 prediction 0.436643563580011 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29398929 chr15:29398931 nonsynonymous SNV 0.905 3 23 hm5C_associated_SNPs_83108 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29398912-29398953
64251 chr1 150280621 150280621 1 + T C rs144788909 150280620 + 150280600 150280640 41 ATGGCTCGCAAGATCAACTTCTTGATGCGAAAGAATCGGGC ATGGCTCGCAAGATCAACTTCCTGATGCGAAAGAATCGGGC < 41bp 0.816886007832949 0.598565685466604 0.2512442 0.23427632 prediction 0.43664064473269 Functional Loss - MRPS21 ENSG00000187145 CDS Human other chr1:150280620 chr1:150280621 synonymous SNV . 0 22 hm5C_associated_SNPs_83111 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:150280612-150280632
64251 chr16 84779068 84779068 1 + G A UCEC 84779065 + 84779045 84779085 41 GCATCACCTCCTGCTGACGGCACGGGCTCTGCATCAGGCAC GCATCACCTCCTGCTGACGGCACAGGCTCTGCATCAGGCAC < 41bp 0.810068043723708 0.591748667510505 0.36553788 0.17967427 prediction 0.436638752426405 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84779065 chr16:84779068 synonymous SNV . 0 24 hm5C_associated_SNPs_83112 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:84779009-84779074
64251 chr22 29885412 29885412 1 + C T rs6006165 29885410 + 29885390 29885430 41 AGCAAAGGAAGAGGCAAAGTCACCGGCTGAGGCCAAGTCTC AGCAAAGGAAGAGGCAAAGTCATCGGCTGAGGCCAAGTCTC < 41bp 0.808914787949976 0.590597569649028 0.3561379 0.3027533 prediction 0.436634436601895 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885410 chr22:29885412 nonsynonymous SNV 0.016 1 23 hm5C_associated_SNPs_83113 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:29885398-29885419
64251 chr17 73487957 73487957 1 + G A UCEC 73487954 + 73487934 73487974 41 GTGAGCTTCAGCAGGGACACCGAGGGTGGTGAAGAAGAGCC GTGAGCTTCAGCAGGGACACCGAAGGTGGTGAAGAAGAGCC < 41bp 0.718304659634339 0.46774710102532 0.8110323 0.31244224 prediction 0.436609319268677 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73487954 chr17:73487957 synonymous SNV . 0 24 hm5C_associated_SNPs_83119 0 0 5 BUD13 POSTAR2 ENCODE chr17:73487948-73487981
64251 chr3 50144929 50144929 1 + C T BLCA 50144927 + 50144907 50144947 41 GGTTTCAGAGACTTGGTCCTCTCAGATGGTAACCGCGTCAG GGTTTCAGAGACTTGGTCCTCTTAGATGGTAACCGCGTCAG < 41bp 0.718296546653966 0.434857429222427 0.2730626 0.2306853 prediction 0.436593093307932 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50144927 chr3:50144929 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_83125 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:50144916-50144941
64251 chr2 219603279 219603279 1 + G A rs561923612 219603276 + 219603256 219603296 41 CCTTGTCTACCGCTAGCTCCCACGACACATCCACCACCAGT CCTTGTCTACCGCTAGCTCCCACAACACATCCACCACCAGT < 41bp 0.806676055495577 0.588388173650111 0.022092402 0.058744848 prediction 0.436575763690933 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603276 chr2:219603279 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_83127 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:219603267-219603309
64251 chr13 73428277 73428277 1 + G A SKCM 73428274 + 73428254 73428294 41 AAAAGGATGCTTTAGAAAAACACGATCAGCTCTTAGACAGG AAAAGGATGCTTTAGAAAAACACAATCAGCTCTTAGACAGG < 41bp 0.748414853760171 0.530127443986114 0.076103 0.03890395 prediction 0.436574819548114 Functional Loss - PIBF1 ENSG00000083535 CDS Human protein_coding chr13:73428274 chr13:73428277 nonsynonymous SNV 0.970 0 24 hm5C_associated_SNPs_83128 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr13:73428258-73428279
64251 chr11 607680 607680 1 + G A rs113889171 607677 + 607657 607697 41 GCAGCAGGGTGCCCCGGGAGCCCGGGGTGCACACGGGCAGC GCAGCAGGGTGCCCCGGGAGCCCAGGGTGCACACGGGCAGC < 41bp 0.813118762836514 0.594832141713987 0.8754519 0.7437531 prediction 0.436573242245054 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607677 chr11:607680 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_83129 0 0 1 EIF3H POSTAR2 ENCODE chr11:607660-607689
64251 chr16 67902442 67902442 1 + G A UCEC 67902439 + 67902419 67902459 41 AAAATTCAGCACAGCATCACCGCGCAGGACCATCAGCCCAC AAAATTCAGCACAGCATCACCGCACAGGACCATCAGCCCAC < 41bp 0.792521740938504 0.574235473381369 0.048690915 0.033789635 prediction 0.43657253511427 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67902439 chr16:67902442 synonymous SNV . 0 24 hm5C_associated_SNPs_83130 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:67902400-67902460
64251 chr20 44463646 44463646 1 + G A UCEC 44463643 + 44463623 44463663 41 GTGGGGCAGTCAGCTCCTGGCGCGGCAGCTGCAGGATTTCT GTGGGGCAGTCAGCTCCTGGCGCAGCAGCTGCAGGATTTCT < 41bp 0.735126434272804 0.516844413011938 0.468331 0.21275732 prediction 0.436564042521733 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44463643 chr20:44463646 nonsynonymous SNV 0.010 2 24 hm5C_associated_SNPs_83132 0 0 1 DDX6 POSTAR2 ENCODE chr20:44463610-44463649
64251 chr16 847845 847845 1 + C T COAD 847843 + 847823 847863 41 CCCTGTGGCCCCGCAGGGGACACGGCCCCGGAGCAGGACTC CCCTGTGGCCCCGCAGGGGACATGGCCCCGGAGCAGGACTC < 41bp 0.753226583454537 0.534948468546211 0.46680418 0.5624724 prediction 0.436556229816652 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847843 chr16:847845 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_83133 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:847840-847860
64251 chr14 24620799 24620799 1 + C T SKCM 24620796 + 24620776 24620816 41 GGGCCCTGACTGAGCTACAGCGCCAACGCCTAGAGCCCTTC GGGCCCTGACTGAGCTACAGCGCTAACGCCTAGAGCCCTTC < 41bp 0.731007495027851 0.512732419683502 0.39804453 0.35989755 prediction 0.436550150688699 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24620796 chr14:24620799 stopgain 0.996 1 24 hm5C_associated_SNPs_83134 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr14:24620795-24620840
64251 chr11 108593922 108593922 1 + C T rs61996357 108593920 + 108593900 108593940 41 TTCAAAAAGGTGGAAAAAGACTCGAAGGGACAGAGCACAGA TTCAAAAAGGTGGAAAAAGACTTGAAGGGACAGAGCACAGA < 41bp 0.868968525430148 0.650696361938395 0.44546795 0.14000452 prediction 0.436544326983507 Functional Loss - DDX10 ENSG00000178105 CDS Human protein_coding chr11:108593920 chr11:108593922 synonymous SNV . 0 23 hm5C_associated_SNPs_83135 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr11:108593918-108593937
64251 chr11 65688123 65688123 1 + C T UCEC 65688121 + 65688101 65688141 41 AAGAAGCTGTCCGGGACAGACTCGGAGCAGGAGGTGAGTGA AAGAAGCTGTCCGGGACAGACTTGGAGCAGGAGGTGAGTGA < 41bp 0.842657910334507 0.624387240645555 0.1944057 0.10735455 prediction 0.436541339377904 Functional Loss - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65688121 chr11:65688123 nonsynonymous SNV 0.901 4 23 hm5C_associated_SNPs_83137 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65688094-65688134
64251 chr11 1594264 1594264 1 + G A rs553909697 1594261 + 1594241 1594281 41 GAACACCTCCGCGCGTGCGGCGGGGACGCGGCGAGTCCGGG GAACACCTCCGCGCGTGCGGCGGAGACGCGGCGAGTCCGGG < 41bp 0.757424156389146 0.53916867827959 0.9267394 0.92062414 prediction 0.436510956219111 Functional Loss - KRTAP5-AS1 ENSG00000233930 ncRNA_exonic Human antisense chr11:1594261 chr11:1594264 . . 0 24 hm5C_associated_SNPs_83143 0 0 1 XPO5 POSTAR2 ENCODE chr11:1594207-1594282
64251 chr17 15931049 15931049 1 + G T rs115686307 15931047 + 15931027 15931067 41 CCCAACTGATTATGACCTTTCAGGATGTCGTCAAGTGATGC CCCAACTGATTATGACCTTTCATGATGTCGTCAAGTGATGC < 41bp 0.718254469378996 0.386342116127034 0.70390075 0.21233216 prediction 0.436508938757992 Functional Loss - TTC19 ENSG00000011295 UTR3 Human protein_coding chr17:15931047 chr17:15931049 . . 0 23 hm5C_associated_SNPs_83145 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:15931000-15931117
64251 chr14 39650863 39650863 1 + G T HNSC 39650860 + 39650840 39650880 41 GATAGAAAGCACAGAAGGAGCGTGGATCGGAAGAGAAGGGA GATAGAAAGCACAGAAGGAGCGTTGATCGGAAGAGAAGGGA < 41bp 0.718250156384402 0.330875097704818 0.06380692 0.05662468 prediction 0.436500312768805 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39650860 chr14:39650863 synonymous SNV . 0 24 hm5C_associated_SNPs_83148 0 0 36 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr8 33357860 33357860 1 + G A HNSC 33357857 + 33357837 33357877 41 CTGCCTTACCTTTACCCGTCCTTGAGAACAGCGGTCCAGGA CTGCCTTACCTTTACCCGTCCTTAAGAACAGCGGTCCAGGA < 41bp 0.718246930135013 0.496335468261288 0.08861533 0.08530298 prediction 0.436493860270027 Functional Loss - TTI2 ENSG00000129696 CDS Human protein_coding chr8:33357857 chr8:33357860 stopgain 0.943 0 24 hm5C_associated_SNPs_83149 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:33357840-33357880
64251 chr22 38381996 38381996 1 + G A rs117896793 38381993 + 38381973 38382013 41 ACAATCTCCCCCCAGTTTTCCTCGACGCCACCCCCGGCGCT ACAATCTCCCCCCAGTTTTCCTCAACGCCACCCCCGGCGCT < 41bp 0.745707292679384 0.527462277690522 0.62015635 0.5219945 prediction 0.436490029977723 Functional Loss - POLR2F ENSG00000100142;ENSG00000100146 intronic Human other chr22:38381993 chr22:38381996 . . 0 24 hm5C_associated_SNPs_83151 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr22:38381972-38381996
64251 chr11 65306007 65306007 1 + C T SKCM 65306004 + 65305984 65306024 41 GAGAGGAAGGTGGCCAAGGGCCCCATGAAGCTGGGAGCCCG GAGAGGAAGGTGGCCAAGGGCCCTATGAAGCTGGGAGCCCG < 41bp 0.718233933728895 0.498797031135705 0.1934079 0.3041057 prediction 0.436467867457789 Functional Loss - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65306004 chr11:65306007 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_83158 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:65305986-65306010
64251 chr17 78195409 78195409 1 + G A UCEC 78195406 + 78195386 78195426 41 TCAGGCCAGGTCCTCTGGCCCCGGGATGGCCCCGAGCGCCT TCAGGCCAGGTCCTCTGGCCCCGAGATGGCCCCGAGCGCCT < 41bp 0.815535989908583 0.597310481776587 0.5627743 0.2490448 prediction 0.436451016263992 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78195406 chr17:78195409 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_83164 0 0 1 PPIG POSTAR2 ENCODE chr17:78195403-78195478
64251 chr20 34095871 34095871 1 + G A SKCM 34095868 + 34095848 34095888 41 CAGGTCTTTCCCACAGGTCTCAGGAGTGGAGGCTGAGCCTA CAGGTCTTTCCCACAGGTCTCAGAAGTGGAGGCTGAGCCTA < 41bp 0.718220634387772 0.476039062523935 0.9189962 0.9025085 prediction 0.436441268775544 Functional Loss - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34095868 chr20:34095871 nonsynonymous SNV 0.667 0 24 hm5C_associated_SNPs_83167 0 0 13 BUD13 POSTAR2 ENCODE chr20:34095862-34095930
64251 chr15 40502390 40502390 1 + T C rs571594522 40502389 + 40502369 40502409 41 CTGGGTGGCGCCAAGAAACTCTGCAGAATTAACAGTAATAA CTGGGTGGCGCCAAGAAACTCCGCAGAATTAACAGTAATAA < 41bp 0.718218677576895 0.453190268647091 0.26233512 0.30147576 prediction 0.436437355153789 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40502389 chr15:40502390 synonymous SNV . 0 22 hm5C_associated_SNPs_83168 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:40502347-40502401
64251 chr15 40502393 40502393 1 + A C COAD 40502389 + 40502369 40502409 41 CTGGGTGGCGCCAAGAAACTCTGCAGAATTAACAGTAATAA CTGGGTGGCGCCAAGAAACTCTGCCGAATTAACAGTAATAA < 41bp 0.718218677576895 0.288685324733153 0.26233512 0.18041176 prediction 0.436437355153789 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40502389 chr15:40502393 synonymous SNV . 0 25 hm5C_associated_SNPs_83169 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:40502347-40502401
64251 chr1 75608891 75608891 1 + G C LUSC 75608887 + 75608867 75608907 41 GCCAAGGGGAATGTCTATCACTTGGCATGCTTTGCCTGCTT GCCAAGGGGAATGTCTATCACTTGCCATGCTTTGCCTGCTT < 41bp 0.718200356522726 0.41824843673387 0.22473335 0.18653789 prediction 0.436400713045452 Functional Loss - LHX8 ENSG00000162624 CDS Human protein_coding chr1:75608887 chr1:75608891 nonsynonymous SNV 0.978 5 25 hm5C_associated_SNPs_83176 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:75608879-75608914
64251 chr1 52082782 52082782 1 + G T UCEC 52082779 + 52082759 52082799 41 TTGTTGTCATTGGCGGCTCCCAAGATGGCGTCCATCATGGA TTGTTGTCATTGGCGGCTCCCAATATGGCGTCCATCATGGA < 41bp 0.718197437298441 0.353621789376351 0.43026808 0.16822991 prediction 0.436394874596883 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52082779 chr1:52082782 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_83180 0 0 7 DDX3X POSTAR2 ENCODE chr1:52082768-52082877
64251 chr1 68564374 68564374 1 - C A UCEC 68564377 - 68564357 68564397 41 TGTTTGTTTCGGAACTTTATCAAGAATTGTTCAGCGCTTCG TGTTTGTTTCGGAACTTTATCAATAATTGTTCAGCGCTTCG < 41bp 0.718197196608121 0.344545137587594 0.78823334 0.19259456 prediction 0.436394393216242 Functional Loss - WLS ENSG00000116729 CDS Human protein_coding chr1:68564377 chr1:68564374 stopgain 0.525 0 24 hm5C_associated_SNPs_83181 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:68564361-68564401
64251 chr22 46096204 46096204 1 + G A OV 46096201 + 46096181 46096221 41 GTTTTTAGGCAACATTGCCTCACGGAATGAAGATTCCCAGT GTTTTTAGGCAACATTGCCTCACAGAATGAAGATTCCCAGT < 41bp 0.78818732021353 0.569997447304724 0.18280861 0.034572095 prediction 0.436379745817612 Functional Loss - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46096201 chr22:46096204 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_83188 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:46096174-46096204
64251 chr19 45911436 45911436 1 + G A rs150994935 45911433 + 45911413 45911453 41 CTCTCTGGCTCCCAGATCGTCAAGGGCAAATTGGCAGGCAA CTCTCTGGCTCCCAGATCGTCAAAGGCAAATTGGCAGGCAA < 41bp 0.791673709030946 0.573490059412027 0.89780426 0.88682294 prediction 0.436367299237838 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45911433 chr19:45911436 synonymous SNV . 0 24 hm5C_associated_SNPs_83192 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:45911428-45911441
64251 chr3 128631436 128631436 1 + G T LUAD 128631433 + 128631413 128631453 41 CCTATATCTGTGCCCACCCTCTGGACAGGACATGCTGAGGC CCTATATCTGTGCCCACCCTCTGTACAGGACATGCTGAGGC < 41bp 0.928207298346751 0.710023925874559 0.70188355 0.25441873 prediction 0.436366744944384 Functional Loss - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128631433 chr3:128631436 nonsynonymous SNV 0.934 3 24 hm5C_associated_SNPs_83193 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:128631384-128631443
64251 chr18 33795660 33795660 1 + G A SKCM 33795657 + 33795637 33795677 41 CCCTCAGGCCCATGCTGACACCGGGGAGACTGGAGCCCCAT CCCTCAGGCCCATGCTGACACCGAGGAGACTGGAGCCCCAT < 41bp 0.812531724730118 0.594348604623408 0.8661125 0.23663455 prediction 0.436366240213421 Functional Loss - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33795657 chr18:33795660 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83194 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr18:33795602-33795663
64251 chr16 28906272 28906272 1 + T C HNSC 28906271 + 28906251 28906291 41 GAGAGAGCCAACGCCTGCAACTCGGTGAGCCTGCGGAGCCC GAGAGAGCCAACGCCTGCAACCCGGTGAGCCTGCGGAGCCC < 41bp 0.821848315854414 0.603666044222314 0.5011282 0.7600229 prediction 0.4363645432642 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28906271 chr16:28906272 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_83196 0 0 1 PRPF8 POSTAR2 ENCODE chr16:28906272-28906311
64251 chr20 55967819 55967819 1 + G A LUSC 55967816 + 55967796 55967836 41 GGCATATCTGGGCGCCAAGCCGCGGAGCCTCCAGACGGGTG GGCATATCTGGGCGCCAAGCCGCAGAGCCTCCAGACGGGTG < 41bp 0.718180774217003 0.47053613094747 0.9332639 0.32217973 prediction 0.436361548434005 Functional Loss - RBM38 ENSG00000132819 CDS Human protein_coding chr20:55967816 chr20:55967819 nonsynonymous SNV 0.734 3 24 hm5C_associated_SNPs_83199 0 0 2 GRWD1 POSTAR2 ENCODE chr20:55967702-55967830
64251 chr16 90103784 90103784 1 + G C LUSC 90103783 + 90103763 90103803 41 CAGAAACAGCTCGCAAACTACGAGAGGGACAAGCAGATCCT CAGAAACAGCTCGCAAACTACCAGAGGGACAAGCAGATCCT < 41bp 0.888418441558362 0.670240483288647 0.37805244 0.52979326 prediction 0.436355916539431 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90103783 chr16:90103784 nonsynonymous SNV 0.100 0 22 hm5C_associated_SNPs_83200 0 0 6 BUD13 POSTAR2 ENCODE chr16:90103769-90103823
64251 chr11 8014459 8014459 1 + G T GBM 8014457 + 8014437 8014477 41 CGCTACGGGCCATGACATCACAGAGCACTCTGTGCTGATCC CGCTACGGGCCATGACATCACATAGCACTCTGTGCTGATCC < 41bp 0.718177297650478 0.351147337670471 0.450324 0.16445962 prediction 0.436354595300956 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8014457 chr11:8014459 stopgain 0.999 1 23 hm5C_associated_SNPs_83201 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:8014438-8014461
64251 chr3 170078504 170078504 1 + G A COAD 170078501 + 170078481 170078521 41 TTCTGCCTCTTCCATCACCTCAGGTTCTTCCTGGCCCATTG TTCTGCCTCTTCCATCACCTCAGATTCTTCCTGGCCCATTG < 41bp 0.718175185525946 0.477661558842869 0.8983502 0.40086922 prediction 0.436350371051892 Functional Loss - SKIL ENSG00000136603 CDS Human protein_coding chr3:170078501 chr3:170078504 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_83202 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:170078464-170078504
64251 chr19 49517771 49517771 1 + C T COAD 49517769 + 49517749 49517789 41 GCACCAGCTACCAGAGCCCTCACGGCATCCCCATAGACCTG GCACCAGCTACCAGAGCCCTCATGGCATCCCCATAGACCTG < 41bp 0.718174779512308 0.448719989935399 0.745005 0.8682366 prediction 0.436349559024617 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49517769 chr19:49517771 synonymous SNV . 0 23 hm5C_associated_SNPs_83205 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:49517740-49517778
64251 chr20 31023500 31023500 1 + C T rs62206933 31023498 + 31023478 31023518 41 ACTCTGAAGCACTGAGTCCTCACGGTGAGTCCACGGATACA ACTCTGAAGCACTGAGTCCTCATGGTGAGTCCACGGATACA < 41bp 0.718164042998982 0.452349465982188 0.20104608 0.22568825 prediction 0.436328085997965 Functional Loss - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31023498 chr20:31023500 synonymous SNV . 0 23 hm5C_associated_SNPs_83209 1 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:31023427-31023502
64251 chr7 75614219 75614219 1 + G A rs72557928 75614216 + 75614196 75614236 41 TACGAGCTGGCGCAGTACGCCTCGGAGCCCTCGGAGCAGGA TACGAGCTGGCGCAGTACGCCTCAGAGCCCTCGGAGCAGGA < 41bp 0.788161579584307 0.569998708606102 0.11069864 0.049031943 prediction 0.43632574195641 Functional Loss - POR ENSG00000127948 CDS Human protein_coding chr7:75614216 chr7:75614219 synonymous SNV . 0 24 hm5C_associated_SNPs_83210 0 0 5 RPS3 POSTAR2 ENCODE chr7:75614176-75614266
64251 chr3 5243588 5243588 1 + G A UCEC 5243585 + 5243565 5243605 41 CTCCCTGCTTTTGAAAACACCAAGACAGGGATTCCATATCC CTCCCTGCTTTTGAAAACACCAAAACAGGGATTCCATATCC < 41bp 0.718162810806893 0.488583817566342 0.14612004 0.24218607 prediction 0.436325621613787 Functional Loss - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5243585 chr3:5243588 synonymous SNV . 0 24 hm5C_associated_SNPs_83211 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr3:5243588-5243611
64251 chr5 179991506 179991506 1 + G T LUAD 179991503 + 179991483 179991523 41 TTCCAGGAAATCCCCTTACCCAGGATATATTGAACCTTTAT TTCCAGGAAATCCCCTTACCCAGTATATATTGAACCTTTAT < 41bp 0.718159595087146 0.334530112653181 0.80958045 0.27688336 prediction 0.436319190174292 Functional Loss - CNOT6 ENSG00000113300 CDS Human protein_coding chr5:179991503 chr5:179991506 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_83215 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:179991489-179991514
64251 chr5 179991505 179991505 1 + G T LUAD 179991503 + 179991483 179991523 41 TTCCAGGAAATCCCCTTACCCAGGATATATTGAACCTTTAT TTCCAGGAAATCCCCTTACCCATGATATATTGAACCTTTAT < 41bp 0.718159595087146 0.384858746016885 0.80958045 0.30719212 prediction 0.436319190174292 Functional Loss - CNOT6 ENSG00000113300 CDS Human protein_coding chr5:179991503 chr5:179991505 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_83216 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:179991489-179991514
64251 chr4 74279232 74279232 1 + C T UCEC 74279229 + 74279209 74279249 41 CCTCTGTTGGAAAAATCCCACTGCATTGCCGAAGTGGAAAA CCTCTGTTGGAAAAATCCCACTGTATTGCCGAAGTGGAAAA < 41bp 0.756707555122765 0.538557112392503 0.19253507 0.076156944 prediction 0.436300885460525 Functional Loss - ALB ENSG00000163631 CDS Human protein_coding chr4:74279229 chr4:74279232 synonymous SNV . 0 24 hm5C_associated_SNPs_83220 0 0 5 DHX30 POSTAR2 ENCODE chr4:74279231-74279262
64251 chr3 179322615 179322615 1 + G A STAD 179322612 + 179322592 179322632 41 CCCGTAGTAGCCATGGCGGCCATGAGTTTGTTGCGGCGGGT CCCGTAGTAGCCATGGCGGCCATAAGTTTGTTGCGGCGGGT < 41bp 0.718148434866064 0.494414702889168 0.42680883 0.3031611 prediction 0.436296869732128 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179322612 chr3:179322615 nonsynonymous SNV 0.702 4 24 hm5C_associated_SNPs_83221 0 0 9 DDX3X POSTAR2 ENCODE chr3:179322598-179322701
64251 chr19 4652071 4652071 1 + G A UCEC 4652068 + 4652048 4652088 41 CCCAGAAGATGCTCAAGAACCTGGTCAAGGTGGCCCTGAAG CCCAGAAGATGCTCAAGAACCTGATCAAGGTGGCCCTGAAG < 41bp 0.786818004797793 0.568670871168492 0.5321996 0.22984627 prediction 0.436294267258601 Functional Loss - TNFAIP8L1 ENSG00000185361 CDS Human protein_coding chr19:4652068 chr19:4652071 nonsynonymous SNV 0.979 0 24 hm5C_associated_SNPs_83223 0 0 1 RBM15 POSTAR2 ENCODE chr19:4652019-4652075
64251 chr17 36288236 36288236 1 + G A SKCM 36288233 + 36288213 36288253 41 AGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTC AGGGAATGCCCATGAACATCCGGAGCCCGATGTGGTCAGTC < 41bp 0.739602045493131 0.521458054934292 0.9175063 0.56327266 prediction 0.436287981117679 Functional Loss - TBC1D3;TBC1D3C;TBC1D3D;TBC1D3E;TBC1D3F;TBC1D3G;TBC1D3H;TBC1D3I;TBC1D3K;TBC1D3L ENSG00000185128 CDS Human other chr17:36288233 chr17:36288236 nonsynonymous SNV 0.015 2 24 hm5C_associated_SNPs_83226 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:36288220-36288240
64251 chr8 55370898 55370898 1 + G A COAD 55370895 + 55370875 55370915 41 GGGCCGAGCCAAGGGCGAGTCCCGTATCCGGCGGCCGATGA GGGCCGAGCCAAGGGCGAGTCCCATATCCGGCGGCCGATGA < 41bp 0.718141357712631 0.476459619009983 0.44910547 0.2670386 prediction 0.436282715425263 Functional Loss - SOX17 ENSG00000164736 CDS Human protein_coding chr8:55370895 chr8:55370898 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_83228 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr8:55370880-55370900
64251 chr12 83290361 83290361 1 + G A LIHC 83290358 + 83290338 83290378 41 TATGGACTCAAGACTGCGATCAGGAATGGAGACTGGCAGAA TATGGACTCAAGACTGCGATCAGAAATGGAGACTGGCAGAA < 41bp 0.74277909595561 0.524639532272863 0.60339075 0.21298593 prediction 0.436279127365494 Functional Loss - TMTC2 ENSG00000179104 CDS Human protein_coding chr12:83290358 chr12:83290361 synonymous SNV . 0 24 hm5C_associated_SNPs_83231 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:83290347-83290372
64251 chr1 192780653 192780653 1 + G A LUSC 192780650 + 192780630 192780670 41 GATGGAGAACAACTCTTATCCTCGTTTCTTGGAGTCAGAAT GATGGAGAACAACTCTTATCCTCATTTCTTGGAGTCAGAAT < 41bp 0.721425493462635 0.503287044808658 0.06737879 0.03793809 prediction 0.436276897307954 Functional Loss - RGS2 ENSG00000116741 CDS Human protein_coding chr1:192780650 chr1:192780653 nonsynonymous SNV 0.954 2 24 hm5C_associated_SNPs_83232 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:192780653-192780678
64251 chr16 25123229 25123229 1 + T C LAML 25123228 + 25123208 25123248 41 GCCACTAGGCAGAGGGAATCCTCTATCACCTCCTGCTGTTC GCCACTAGGCAGAGGGAATCCCCTATCACCTCCTGCTGTTC < 41bp 0.789539922983017 0.571409736645241 0.9672996 0.20056012 prediction 0.436260372675552 Functional Loss - LCMT1 ENSG00000205629 CDS Human protein_coding chr16:25123228 chr16:25123229 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_83236 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:25123204-25123251
64251 chr3 51696692 51696692 1 + C T UCEC 51696690 + 51696670 51696710 41 GTGCTGTTCCCGGGACAGCTCTCGGAACTGAGCCTCGACTA GTGCTGTTCCCGGGACAGCTCTTGGAACTGAGCCTCGACTA < 41bp 0.855603365038901 0.637476495162516 0.4069218 0.2737078 prediction 0.43625373975277 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51696690 chr3:51696692 synonymous SNV . 0 23 hm5C_associated_SNPs_83239 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:51696654-51696705
64251 chr15 63414116 63414116 1 + G A rs34925488 63414113 + 63414093 63414133 41 TGACTGCCCGGGCTGCCGCCCCCGGGGGCTTGGCCTCAAGC TGACTGCCCGGGCTGCCGCCCCCAGGGGCTTGGCCTCAAGC < 41bp 0.806082856233929 0.58796364906876 0.87694895 0.27830434 prediction 0.436238414330336 Functional Loss - LACTB ENSG00000103642 CDS Human protein_coding chr15:63414113 chr15:63414116 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_83245 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:63414087-63414123
64251 chr7 2420176 2420176 1 + G T rs142858802 2420174 + 2420154 2420194 41 GCCACTGGCGGCACCTTCTCCTGCGCCCAGTGATGTTTCCA GCCACTGGCGGCACCTTCTCCTTCGCCCAGTGATGTTTCCA < 41bp 0.718117662810507 0.407572948653013 0.24286833 0.14220679 prediction 0.436235325621015 Functional Loss - EIF3B ENSG00000106263 UTR3 Human protein_coding chr7:2420174 chr7:2420176 . . 0 23 hm5C_associated_SNPs_83247 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:2420092-2420229
64251 chr12 95681492 95681492 1 + C T UCEC 95681490 + 95681470 95681510 41 GCTTGTTTGTACTAAAGAAACACAAGAACTAGTGTCAGAGG GCTTGTTTGTACTAAAGAAACATAAGAACTAGTGTCAGAGG < 41bp 0.718117158995034 0.445103210977281 0.1418542 0.14261088 prediction 0.436234317990069 Functional Loss - VEZT ENSG00000028203 CDS Human protein_coding chr12:95681490 chr12:95681492 stopgain 1.000 0 23 hm5C_associated_SNPs_83248 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:95681451-95681516
64251 chr4 5803785 5803785 1 + G A COAD 5803782 + 5803762 5803802 41 TCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAG TCGGAAGGATCATGGAGGACCACAAGGAGAGAAAACTGCAG < 41bp 0.777169316538686 0.559052999164467 0.68925554 0.28447318 prediction 0.436232634748439 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5803782 chr4:5803785 nonsynonymous SNV 0.051 1 24 hm5C_associated_SNPs_83250 0 0 1 BUD13 POSTAR2 ENCODE chr4:5803783-5803806
64251 chr5 179264449 179264449 1 - C T UCEC 179264452 - 179264432 179264472 41 GGTCCTGGAGGCACAGAATCCTCGACCCACACGACTATGTG GGTCCTGGAGGCACAGAATCCTCAACCCACACGACTATGTG < 41bp 0.768628263358202 0.550520071758634 0.6570392 0.27115873 prediction 0.436216383199135 Functional Loss - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264452 chr5:179264449 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83258 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:179264428-179264466
64251 chr14 102675662 102675662 1 + A C GBM 102675658 + 102675638 102675678 41 GCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCCCTC GCTCTGTTTATGGGACCTTACAGACGATATCCTTTTCCCTC < 41bp 0.718099207232556 0.336848931395904 0.08535913 0.11802873 prediction 0.436198414465112 Functional Loss - WDR20 ENSG00000140153 CDS Human protein_coding chr14:102675658 chr14:102675662 nonsynonymous SNV 0.991 3 25 hm5C_associated_SNPs_83262 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:102675661-102675694
64251 chr3 5214397 5214397 1 + T C COAD 5214396 + 5214376 5214416 41 GAAATGAGCTACATAATCTTCTAGATAAACCACAGTTACAA GAAATGAGCTACATAATCTTCCAGATAAACCACAGTTACAA < 41bp 0.811513618189083 0.593425032301374 0.18436205 0.13783267 prediction 0.436177171775417 Functional Loss - ARL8B ENSG00000134108 CDS Human protein_coding chr3:5214396 chr3:5214397 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_83269 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:5214376-5214412
64251 chr2 70121125 70121125 1 + C T THCA 70121123 + 70121103 70121143 41 AAGCGGGACTCCAAATGGGTCGCAGTCGCAGCCGCTCTCCA AAGCGGGACTCCAAATGGGTCGTAGTCGCAGCCGCTCTCCA < 41bp 0.718083591416638 0.484190261554581 0.19771013 0.3024422 prediction 0.436167182833277 Functional Loss - SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70121123 chr2:70121125 synonymous SNV . 0 23 hm5C_associated_SNPs_83276 0 0 3 DDX3X POSTAR2 ENCODE chr2:70121095-70121152
64251 chr16 84778965 84778965 1 + C T SKCM 84778963 + 84778943 84778983 41 AATGGACAAATACTTGAATCCTCGGGTGAGGGCACAGCTAC AATGGACAAATACTTGAATCCTTGGGTGAGGGCACAGCTAC < 41bp 0.858181754657697 0.640099236425831 0.4693995 0.3770731 prediction 0.436165036463732 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778963 chr16:84778965 nonsynonymous SNV 0.874 0 23 hm5C_associated_SNPs_83277 0 0 10 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr16:84778940-84778972
64251 chr5 102611776 102611776 1 + G A rs115795390 102611773 + 102611753 102611793 41 CGGAGGACCGTGTCAGGCTACCAGATCCTACACATGGACTC CGGAGGACCGTGTCAGGCTACCAAATCCTACACATGGACTC < 41bp 0.718077671831289 0.485434503948174 0.43052486 0.1879786 prediction 0.436155343662577 Functional Loss - C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102611773 chr5:102611776 synonymous SNV . 0 24 hm5C_associated_SNPs_83279 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:102611759-102611781
64251 chr12 57849340 57849340 1 + G T UCEC 57849338 + 57849318 57849358 41 GCATGCGGCTCCCTGATGTCCAGCTCTGGCTGGTGCTGCTG GCATGCGGCTCCCTGATGTCCATCTCTGGCTGGTGCTGCTG < 41bp 0.718076166564137 0.357723849958235 0.101578325 0.09869543 prediction 0.436152333128274 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57849338 chr12:57849340 nonsynonymous SNV 0.328 1 23 hm5C_associated_SNPs_83280 0 0 1 RPS3 POSTAR2 ENCODE chr12:57849300-57849343
64251 chr17 76167658 76167658 1 + G A rs148851394 76167655 + 76167635 76167675 41 AACCAGTGGGCAGTCACCAACCCGAAGGACGTGCTGGTGGG AACCAGTGGGCAGTCACCAACCCAAAGGACGTGCTGGTGGG < 41bp 0.805697473091249 0.587621394644727 0.30566496 0.1778081 prediction 0.436152156893045 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167655 chr17:76167658 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83281 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:76167640-76167660
64251 chr21 15599222 15599222 1 + G A SKCM 15599219 + 15599199 15599239 41 AGCAGTGGCATGTGTATAATCCAGTGCTGCAGCTTCCTTAC AGCAGTGGCATGTGTATAATCCAATGCTGCAGCTTCCTTAC < 41bp 0.718068817971054 0.478634343398421 0.4380274 0.19297627 prediction 0.436137635942109 Functional Loss - RBM11 ENSG00000185272 CDS Human protein_coding chr21:15599219 chr21:15599222 nonsynonymous SNV 0.744 0 24 hm5C_associated_SNPs_83284 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr21:15599220-15599243
64251 chr2 28635106 28635106 1 + G C LUAD 28635102 + 28635082 28635122 41 AGCATTGCTGGGGGCTTCTACGGTGAGGAGCCCCTGCACAC AGCATTGCTGGGGGCTTCTACGGTCAGGAGCCCCTGCACAC < 41bp 0.718067611830236 0.425451917288409 0.738248 0.2414979 prediction 0.436135223660472 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28635102 chr2:28635106 nonsynonymous SNV 0.572 0 25 hm5C_associated_SNPs_83285 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:28635100-28635140
64251 chr19 18475753 18475753 1 + G A rs533840586 18475750 + 18475730 18475770 41 TGTTCTCCTTAGCGGGGTGGCGCGGGGGGCTCAAAACGGGG TGTTCTCCTTAGCGGGGTGGCGCAGGGGGCTCAAAACGGGG < 41bp 0.781185605563915 0.56312439676374 0.92532086 0.79363745 prediction 0.43612241760035 Functional Loss - PGPEP1 ENSG00000130517 UTR3 Human protein_coding chr19:18475750 chr19:18475753 . . 0 24 hm5C_associated_SNPs_83288 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:18475731-18475757
64251 chr11 61213502 61213502 1 + C T COAD 61213499 + 61213479 61213519 41 ACAAAAACAAAGAGCAGAGACTGCGTGCCCCAGATCTTGAG ACAAAAACAAAGAGCAGAGACTGTGTGCCCCAGATCTTGAG < 41bp 0.722235455969578 0.504174913154125 0.13343528 0.07255775 prediction 0.436121085630905 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61213499 chr11:61213502 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83290 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61213497-61213525
64251 chrX 46433431 46433431 1 + C T UCEC 46433429 + 46433409 46433449 41 GCGCTGCTGTTGGTGCTGTACACGCTGGTGCTGTTGCTCGT GCGCTGCTGTTGGTGCTGTACATGCTGGTGCTGTTGCTCGT < 41bp 0.795980718515675 0.577922321159486 0.08698553 0.22165081 prediction 0.436116794712378 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46433429 chrX:46433431 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_83291 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:46433427-46433456
64251 chr7 73609547 73609547 1 + C T CESC 73609545 + 73609525 73609565 41 CAGCTTAAACCTCGAACAGTCGCGACGCCCCTCAATCAAGT CAGCTTAAACCTCGAACAGTCGTGACGCCCCTCAATCAAGT < 41bp 0.850732576803896 0.63267631184601 0.0063276887 0.0065875947 prediction 0.436112529915774 Functional Loss - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609545 chr7:73609547 nonsynonymous SNV 0.874 0 23 hm5C_associated_SNPs_83292 0 0 2 YBX3 POSTAR2 ENCODE chr7:73609530-73609569
64251 chr19 36603844 36603844 1 + G T SARC 36603841 + 36603821 36603861 41 TTTCATGACGCCTTCGATCTCAAGCGCCACATGAGGACTCA TTTCATGACGCCTTCGATCTCAATCGCCACATGAGGACTCA < 41bp 0.71805578400392 0.318041404600202 0.4364207 0.039998442 prediction 0.436111568007839 Functional Loss - OVOL3 ENSG00000105261 CDS Human protein_coding chr19:36603841 chr19:36603844 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_83294 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36603820-36603850
64251 chr15 49611912 49611912 1 + T C UCEC 49611911 + 49611891 49611931 41 CTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAG CTGAAAACATGGTCCAGCTGCCGGGAGAGTTGATGAACCAG < 41bp 0.718052471183925 0.47460278178626 0.36728013 0.55706465 prediction 0.436104942367851 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49611911 chr15:49611912 nonsynonymous SNV 0.992 5 22 hm5C_associated_SNPs_83297 0 0 2 PPIG POSTAR2 ENCODE chr15:49611875-49612023
64251 chr6 107955308 107955308 1 + C T LUSC 107955305 + 107955285 107955325 41 CGCGGGCCTCCGCACCATGCCTCCAACCCCAACAGCCCCCT CGCGGGCCTCCGCACCATGCCTCTAACCCCAACAGCCCCCT < 41bp 0.718052015427464 0.493294496913965 0.95051277 0.9188597 prediction 0.436104030854928 Functional Loss - SOBP ENSG00000112320 CDS Human protein_coding chr6:107955305 chr6:107955308 synonymous SNV . 0 24 hm5C_associated_SNPs_83300 0 0 3 HNRNPK POSTAR2 ENCODE chr6:107955300-107955370
64251 chr13 47275329 47275329 1 + C T OV 47275326 + 47275306 47275346 41 TGAGAGAAGCAGTAGATTTGCTGCAAGATCCCAATGGGTGT TGAGAGAAGCAGTAGATTTGCTGTAAGATCCCAATGGGTGT < 41bp 0.718046069107716 0.497760817730958 0.29464668 0.29333925 prediction 0.436092138215432 Functional Loss - LRCH1 ENSG00000136141 CDS Human protein_coding chr13:47275326 chr13:47275329 stopgain 0.927 1 24 hm5C_associated_SNPs_83304 0 0 8 BUD13 POSTAR2 ENCODE chr13:47275255-47275341
64251 chr11 118405260 118405260 1 + G A UCEC 118405257 + 118405237 118405277 41 CAGTGCTGGGCTATATCTATCGAGTGTCCAGCGTGAGCAGT CAGTGCTGGGCTATATCTATCGAATGTCCAGCGTGAGCAGT < 41bp 0.718041538008368 0.483258700317266 0.88651055 0.38863632 prediction 0.436083076016735 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118405257 chr11:118405260 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_83305 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118405238-118405269
64251 chr10 103900616 103900616 1 + A C PAAD 103900612 + 103900592 103900632 41 CTGGGAAGTGGCCTAGCCTTCCAGAGACTCCCACAGGGCTG CTGGGAAGTGGCCTAGCCTTCCAGCGACTCCCACAGGGCTG < 41bp 0.718037953833427 0.308832502730504 0.89156556 0.8215655 prediction 0.436075907666855 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900612 chr10:103900616 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_83309 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:103900600-103900620
64251 chr22 32340616 32340616 1 + G C rs576593511 32340615 + 32340595 32340635 41 CCGGCCGGCGAGCCAGTGCGCGTGCGCGGCGGCGGCCTCCG CCGGCCGGCGAGCCAGTGCGCCTGCGCGGCGGCGGCCTCCG < 41bp 0.823361730010534 0.60533015935807 0.80200887 0.4903143 prediction 0.436063141304928 Functional Loss - YWHAH ENSG00000128245 UTR5 Human protein_coding chr22:32340615 chr22:32340616 . . 0 22 hm5C_associated_SNPs_83312 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:32340580-32340620
64251 chrX 129139248 129139248 1 + G T LUSC 129139246 + 129139226 129139266 41 CTCTACAGCGGCGTGCACAACTGGACCAGTTCTGACCGGAT CTCTACAGCGGCGTGCACAACTTGACCAGTTCTGACCGGAT < 41bp 0.718031006624159 0.36916399819632 0.35060105 0.051614046 prediction 0.436062013248318 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129139246 chrX:129139248 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_83313 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:129139231-129139282
64251 chr1 249211618 249211618 1 + C T rs141953668 249211615 + 249211595 249211635 41 CTATGTGTGAGTACTTTGGGCACCGGGGGTCCAAGCAGCTG CTATGTGTGAGTACTTTGGGCACTGGGGGTCCAAGCAGCTG < 41bp 0.725572576706443 0.507546022771535 0.8099465 0.7060747 prediction 0.436053107869816 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211615 chr1:249211618 nonsynonymous SNV 0.875 3 24 hm5C_associated_SNPs_83316 0 0 4 RBM15 POSTAR2 ENCODE chr1:249211604-249211644
64251 chr5 76115069 76115069 1 + C T rs2243072 76115067 + 76115047 76115087 41 ATCCTGCTAGCAGCCTCTCTCTCCTGCAGTGGCACCATCCA ATCCTGCTAGCAGCCTCTCTCTTCTGCAGTGGCACCATCCA < 41bp 0.718025950753112 0.472365077888837 0.59064853 0.2621107 prediction 0.436051901506223 Functional Loss - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76115067 chr5:76115069 nonsynonymous SNV 0.013 1 23 hm5C_associated_SNPs_83317 0 0 3 DDX3X POSTAR2 ENCODE chr5:76114937-76115075
64251 chr2 169626081 169626081 1 + C T UCEC 169626078 + 169626058 169626098 41 AGATGAGGAGGACTCAGAACCTCCGGGAAAGAATCCCCACA AGATGAGGAGGACTCAGAACCTCTGGGAAAGAATCCCCACA < 41bp 0.721993765101616 0.503976926977277 0.3730871 0.1945132 prediction 0.436033676248678 Functional Loss - CERS6 ENSG00000172292 CDS Human protein_coding chr2:169626078 chr2:169626081 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_83324 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:169626072-169626103
64251 chr8 133849986 133849986 1 + C T BRCA 133849983 + 133849963 133850003 41 GAGTGCTTGTGTTGGCAACACAGCGTGTGCATGGGGCTGCT GAGTGCTTGTGTTGGCAACACAGTGTGTGCATGGGGCTGCT < 41bp 0.728938401550882 0.51092939896576 0.12160441 0.11244327 prediction 0.436018005170244 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133849983 chr8:133849986 synonymous SNV . 0 24 hm5C_associated_SNPs_83329 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:133849954-133850035
64251 chr11 68696768 68696768 1 + G T HNSC 68696766 + 68696746 68696786 41 TGGATCCCCCTGCTGAAGGCCAGAAAGTGCATCCTGGCGGG TGGATCCCCCTGCTGAAGGCCATAAAGTGCATCCTGGCGGG < 41bp 0.718007910537885 0.355813749709808 0.10280764 0.069312006 prediction 0.43601582107577 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68696766 chr11:68696768 nonsynonymous SNV 0.731 2 23 hm5C_associated_SNPs_83330 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68696762-68696790
64251 chr3 9959648 9959648 1 + C T SKCM 9959646 + 9959626 9959666 41 GCCTGGGGACATCGTGCCTGCTCCGGGCCCCGTGCTGGCGC GCCTGGGGACATCGTGCCTGCTTCGGGCCCCGTGCTGGCGC < 41bp 0.823291546623724 0.605298234628654 0.2310488 0.1045391 prediction 0.435986623990139 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9959646 chr3:9959648 nonsynonymous SNV 0.024 1 23 hm5C_associated_SNPs_83338 0 0 4 DDX3X POSTAR2 ENCODE chr3:9959616-9959675
64251 chr10 12123550 12123550 1 + C T rs138526346 12123547 + 12123527 12123567 41 GCCAAAATCAACCCCCTCTTCACCGGACAAGCCCTGCTGGA GCCAAAATCAACCCCCTCTTCACTGGACAAGCCCTGCTGGA < 41bp 0.717992692067657 0.499244826131945 0.17879272 0.24411875 prediction 0.435985384135314 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12123547 chr10:12123550 synonymous SNV . 0 24 hm5C_associated_SNPs_83339 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:12123531-12123552
64251 chr2 220396544 220396544 1 + G T LUAD 220396542 + 220396522 220396562 41 CCGCGGAGCTCGCTGCCCAGCCGGGCAGGGGGCATGGGCAG CCGCGGAGCTCGCTGCCCAGCCTGGCAGGGGGCATGGGCAG < 41bp 0.717987500789107 0.342916793184774 0.56202984 0.09161851 prediction 0.435975001578215 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220396542 chr2:220396544 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_83342 0 0 1 NONO POSTAR2 ENCODE chr2:220396512-220396561
64251 chr4 40351080 40351080 1 + G A STAD 40351077 + 40351057 40351097 41 CCTGGACCTACAATGGCAATCAGGTGGACATATTCAACGCC CCTGGACCTACAATGGCAATCAGATGGACATATTCAACGCC < 41bp 0.71798553615722 0.488701538238533 0.89792144 0.8107078 prediction 0.43597107231444 Functional Loss - CHRNA9 ENSG00000174343 CDS Human protein_coding chr4:40351077 chr4:40351080 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_83344 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:40351054-40351104
64251 chr6 44376338 44376338 1 + G A COAD 44376335 + 44376315 44376355 41 CAGCGTTGCTCTTAGAACACCACGAACACCAGCTTCCCAGG CAGCGTTGCTCTTAGAACACCACAAACACCAGCTTCCCAGG < 41bp 0.788342350409641 0.570360249546064 0.11997229 0.118932486 prediction 0.435964201727153 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44376335 chr6:44376338 nonsynonymous SNV 0.926 2 24 hm5C_associated_SNPs_83345 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44376185-44376360
64251 chr15 76630126 76630126 1 + C T COAD 76630124 + 76630104 76630144 41 GCCCTTCCCCGGCAGAGAAGCCCGGGACGGCCATGTGCGTG GCCCTTCCCCGGCAGAGAAGCCTGGGACGGCCATGTGCGTG < 41bp 0.717981108130624 0.481644447146469 0.39825705 0.73242676 prediction 0.435962216261247 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630124 chr15:76630126 synonymous SNV . 0 23 hm5C_associated_SNPs_83347 0 0 2 BUD13 POSTAR2 ENCODE chr15:76630061-76630183
64251 chr20 61445084 61445084 1 + C T LUSC 61445082 + 61445062 61445102 41 CGGAGCTGCTGCGGGCTCCCCTCAGGCTCTGCTTCGTGACC CGGAGCTGCTGCGGGCTCCCCTTAGGCTCTGCTTCGTGACC < 41bp 0.717974893622174 0.487309281745206 0.28291315 0.13555512 prediction 0.435949787244347 Functional Loss - OGFR ENSG00000060491 UTR3 Human protein_coding chr20:61445082 chr20:61445084 . . 0 23 hm5C_associated_SNPs_83349 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61445042-61445120
64251 chr3 184081340 184081340 1 + G A ESCA 184081337 + 184081317 184081357 41 AAGGATATTGACCCGGAGGGCAAGAAGTTTGACCGAGGTAA AAGGATATTGACCCGGAGGGCAAAAAGTTTGACCGAGGTAA < 41bp 0.769814424902399 0.551843391327757 0.24872935 0.09060183 prediction 0.435942067149284 Functional Loss - POLR2H ENSG00000163882 CDS Human protein_coding chr3:184081337 chr3:184081340 synonymous SNV . 0 24 hm5C_associated_SNPs_83352 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr3:184081266-184081353
64251 chr2 15743351 15743351 1 + G A STAD 15743348 + 15743328 15743368 41 ATGAAGTATCCTGTCATGACCAAGGGTTATGCAGGGTCGGG ATGAAGTATCCTGTCATGACCAAAGGTTATGCAGGGTCGGG < 41bp 0.781745480023196 0.563780299431806 0.48547962 0.23497146 prediction 0.43593036118278 Functional Loss - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15743348 chr2:15743351 nonsynonymous SNV 0.944 4 24 hm5C_associated_SNPs_83357 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:15743326-15743355
64251 chr19 17992829 17992829 1 + T C READ 17992828 + 17992808 17992848 41 TGTAGAAGACCTCATCAAACCTCGGCTGCGGAGCCTGGCAC TGTAGAAGACCTCATCAAACCCCGGCTGCGGAGCCTGGCAC < 41bp 0.830662144846547 0.612699621808783 0.40934557 0.34698945 prediction 0.435925046075528 Functional Loss - SLC5A5 ENSG00000105641 CDS Human protein_coding chr19:17992828 chr19:17992829 synonymous SNV . 0 22 hm5C_associated_SNPs_83359 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:17992821-17992852
64251 chr9 123907182 123907182 1 + G A SKCM 123907179 + 123907159 123907199 41 ACAAGCAGCCAGAGATCTCACCCGAGCAGAAGCTGAGATCG ACAAGCAGCCAGAGATCTCACCCAAGCAGAAGCTGAGATCG < 41bp 0.775672506891202 0.557710803082189 0.05569327 0.03608316 prediction 0.435923407618026 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123907179 chr9:123907182 nonsynonymous SNV 0.866 2 24 hm5C_associated_SNPs_83360 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:123907180-123907200
64251 chr5 68809848 68809848 1 + G A UVM 68809845 + 68809825 68809865 41 AATTTTCTTTGCTGTGAAAACTCGAAGAAAGATGGACAGGT AATTTTCTTTGCTGTGAAAACTCAAAGAAAGATGGACAGGT < 41bp 0.722822053909048 0.504861659804191 0.30694544 0.2862806 prediction 0.435920788209714 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68809845 chr5:68809848 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_83361 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:68809787-68809867
64251 chr5 130726763 130726763 1 + C T rs143328559 130726761 + 130726741 130726781 41 CTGCCAATGTCCAGATGCAGCTCGTGGATACGAAGGCGGGA CTGCCAATGTCCAGATGCAGCTTGTGGATACGAAGGCGGGA < 41bp 0.717951494423578 0.443377138723785 0.10245976 0.06591827 prediction 0.435902988847157 Functional Loss - CDC42SE2 ENSG00000158985 CDS Human protein_coding chr5:130726761 chr5:130726763 synonymous SNV . 0 23 hm5C_associated_SNPs_83364 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:130726762-130726800
64251 chr13 88330443 88330443 1 + G T STAD 88330440 + 88330420 88330460 41 AACCCAACCGGAACGAATATCTGGAGTTAAAAGCAAAACTA AACCCAACCGGAACGAATATCTGTAGTTAAAAGCAAAACTA < 41bp 0.919456288107441 0.701508353420641 0.57493114 0.3322071 prediction 0.4358958693736 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88330440 chr13:88330443 stopgain 1.000 1 24 hm5C_associated_SNPs_83368 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:88330394-88330453
64251 chr1 156737935 156737935 1 + T C STAD 156737934 + 156737914 156737954 41 CCCTGGCCTCAATCTGCCCCCTCCAATTGGCGGTGCCGGTC CCCTGGCCTCAATCTGCCCCCCCCAATTGGCGGTGCCGGTC < 41bp 0.817948260428663 0.600013397991781 0.9527117 0.004959464 prediction 0.435869724873764 Functional Loss - PRCC ENSG00000143294 CDS Human protein_coding chr1:156737934 chr1:156737935 synonymous SNV . 0 22 hm5C_associated_SNPs_83373 0 0 4 CPSF2 POSTAR2 GSE37401,GSM917670 chr1:156737919-156737942
64251 chr16 29819018 29819018 1 + G A BLCA 29819015 + 29818995 29819035 41 CACAAGCTGTCGCACTCGGACGAGAAGCCCTACCAGTGCCC CACAAGCTGTCGCACTCGGACGAAAAGCCCTACCAGTGCCC < 41bp 0.797560835257116 0.579630116171441 0.30630237 0.14547157 prediction 0.43586143817135 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819015 chr16:29819018 synonymous SNV . 0 24 hm5C_associated_SNPs_83375 0 0 35 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:29818903-29819092
64251 chr2 27259640 27259640 1 + G T LAML 27259638 + 27259618 27259658 41 CTCCCTTTGCCATCACATACCTGGATCGGCTGCTCCTGTGA CTCCCTTTGCCATCACATACCTTGATCGGCTGCTCCTGTGA < 41bp 0.911065311419275 0.69313866615269 0.26844332 0.022980273 prediction 0.43585329053317 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27259638 chr2:27259640 synonymous SNV . 0 23 hm5C_associated_SNPs_83376 0 0 4 DDX24 POSTAR2 ENCODE chr2:27259618-27259647
64251 chr6 28251758 28251758 1 + C T KIRC 28251756 + 28251736 28251776 41 ACTTCTGCTACCAGGAGGCTCACGGACCCCAGGAAGCTCTG ACTTCTGCTACCAGGAGGCTCATGGACCCCAGGAAGCTCTG < 41bp 0.82857371156907 0.610647092194878 0.7334749 0.3028381 prediction 0.435853238748383 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28251756 chr6:28251758 synonymous SNV . 0 23 hm5C_associated_SNPs_83377 0 0 1 RBM15 POSTAR2 ENCODE chr6:28251729-28251775
64251 chr14 24909436 24909436 1 - G A rs7157920 24909439 - 24909419 24909459 41 CGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTGCAAGC CGCCGAGCCTTCATCCCTCTCCCTAGCGCTGTGGTGCAAGC < 41bp 0.73560962849526 0.517683769415612 0.076402634 0.0843474 prediction 0.435851718159297 Functional Loss - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909439 chr14:24909436 synonymous SNV . 0 24 hm5C_associated_SNPs_83378 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24909409-24909454
64251 chr1 29606640 29606640 1 + G A UCEC 29606637 + 29606617 29606657 41 TGCTGAGGCCGGCACAGGGCCGCGGTGCGCCCATCAGGTGG TGCTGAGGCCGGCACAGGGCCGCAGTGCGCCCATCAGGTGG < 41bp 0.813155749056835 0.595230252839579 0.285641 0.08737883 prediction 0.435850992434514 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29606637 chr1:29606640 nonsynonymous SNV 0.375 4 24 hm5C_associated_SNPs_83379 0 0 2 PPIG POSTAR2 ENCODE chr1:29606603-29606649
64251 chr1 93913852 93913852 1 + C T COAD 93913850 + 93913830 93913870 41 AGTTCCGCCATGAGCTGGGGCACGGAGCTGTGGGTGAGTCG AGTTCCGCCATGAGCTGGGGCATGGAGCTGTGGGTGAGTCG < 41bp 0.778188077730292 0.560262924625432 0.41763952 0.43445498 prediction 0.43585030620972 Functional Loss - FNBP1L ENSG00000137942 CDS Human protein_coding chr1:93913850 chr1:93913852 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_83381 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:93913827-93913854
64251 chr1 25757646 25757646 1 + G A rs369738026 25757643 + 25757623 25757663 41 CGCCGCCCCCTAAAGCGGAACCGGATCACCGAGGGCATTTA CGCCGCCCCCTAAAGCGGAACCGAATCACCGAGGGCATTTA < 41bp 0.717923359749996 0.484249349980994 0.46937028 0.15355438 prediction 0.435846719499993 Functional Loss - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25757643 chr1:25757646 synonymous SNV . 0 24 hm5C_associated_SNPs_83382 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:25757635-25757653
64251 chr16 29675891 29675891 1 + A C HNSC 29675890 + 29675870 29675910 41 TCCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACTGGGGCC TCCTGCTGTGGCGCCGGCGGCCGAAGCGGCGGACTGGGGCC < 41bp 0.832471316151894 0.61455499775909 0.9200139 0.8993199 prediction 0.435832636785609 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675890 chr16:29675891 nonsynonymous SNV 0.956 3 22 hm5C_associated_SNPs_83387 0 0 7 RBM15 POSTAR2 ENCODE chr16:29675829-29675893
64251 chr9 91090081 91090081 1 + G A BLCA 91090078 + 91090058 91090098 41 GAATATGCCAAAGAAGATGGCTCGAAAAGGACTGGCATGGT GAATATGCCAAAGAAGATGGCTCAAAAAGGACTGGCATGGT < 41bp 0.729160812662844 0.511253135145174 0.08716518 0.026100218 prediction 0.435815355035339 Functional Loss - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91090078 chr9:91090081 synonymous SNV . 0 24 hm5C_associated_SNPs_83390 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr9:91090054-91090092
64251 chr16 88871912 88871912 1 + G A rs577211739 88871909 + 88871889 88871929 41 CCCAGCCCGGCCTGCCGGGACTCGTGCTGCCCTACAAGTAC CCCAGCCCGGCCTGCCGGGACTCATGCTGCCCTACAAGTAC < 41bp 0.717903555635723 0.470181131481944 0.09708658 0.051519543 prediction 0.435807111271447 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88871909 chr16:88871912 nonsynonymous SNV 0.557 1 24 hm5C_associated_SNPs_83395 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88871891-88871924
64251 chr11 65481111 65481111 1 + G A ESCA 65481108 + 65481088 65481128 41 CCAGCAACTCCAGTGCCCAGCGAGACAGCCCCGGCCTCGGT CCAGCAACTCCAGTGCCCAGCGAAACAGCCCCGGCCTCGGT < 41bp 0.806146107226506 0.588251675300512 0.89473057 0.823594 prediction 0.435788863851986 Functional Loss - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65481108 chr11:65481111 synonymous SNV . 0 24 hm5C_associated_SNPs_83404 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:65481106-65481147
64251 chr2 220046823 220046823 1 + C T COAD 220046821 + 220046801 220046841 41 AGGAGGGAGAGCTGGCCCCTCCCGAAGACCTACTAGGCCGT AGGAGGGAGAGCTGGCCCCTCCTGAAGACCTACTAGGCCGT < 41bp 0.717893796156114 0.444143169973238 0.81069696 0.2998146 prediction 0.435787592312229 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046821 chr2:220046823 synonymous SNV . 0 23 hm5C_associated_SNPs_83405 0 0 1 DDX3X POSTAR2 ENCODE chr2:220046801-220046840
64251 chr1 156594401 156594401 1 + G C CESC 156594400 + 156594380 156594420 41 CGTCTCCCGCCAGCTTGGACCGAGGGTCTGGACTGGTGTAA CGTCTCCCGCCAGCTTGGACCCAGGGTCTGGACTGGTGTAA < 41bp 0.889294176703716 0.671400470849619 0.9167317 0.89339733 prediction 0.435787411708194 Functional Loss - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594400 chr1:156594401 nonsynonymous SNV 0.782 4 22 hm5C_associated_SNPs_83406 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr19 57953332 57953332 1 + T C COAD 57953331 + 57953311 57953351 41 TTAATGATGCTCAGAGACACCTGCACAGCAATGTGATGTTG TTAATGATGCTCAGAGACACCCGCACAGCAATGTGATGTTG < 41bp 0.811848491979709 0.593967969682677 0.056363523 0.023890078 prediction 0.435761044594064 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57953331 chr19:57953332 nonsynonymous SNV 0.165 3 22 hm5C_associated_SNPs_83413 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57953311-57953349
64251 chr1 156838333 156838333 1 + C T rs148324672 156838331 + 156838311 156838351 41 AAGGTCCAGGTGCCCAATGCCTCGGTGGATGTGGGGGACGA AAGGTCCAGGTGCCCAATGCCTTGGTGGATGTGGGGGACGA < 41bp 0.833151446652719 0.615272497205403 0.22324464 0.21494949 prediction 0.435757898894632 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156838331 chr1:156838333 nonsynonymous SNV 0.622 2 23 hm5C_associated_SNPs_83414 0 0 1 AKAP8L POSTAR2 ENCODE chr1:156838320-156838392
64251 chr22 39917600 39917600 1 + C T SKCM 39917597 + 39917577 39917617 41 CACTTCAAACCTCATGGGTTCTCCAGCGACAAGGCTAAGGC CACTTCAAACCTCATGGGTTCTCTAGCGACAAGGCTAAGGC < 41bp 0.717874804666565 0.49454686964149 0.89161646 0.45279935 prediction 0.43574960933313 Functional Loss - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917597 chr22:39917600 synonymous SNV . 0 24 hm5C_associated_SNPs_83417 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:39917556-39917606
64251 chrX 106893651 106893651 1 + G A rs5962870 106893648 + 106893628 106893668 41 AACTAGCAACAAAGGCAACCCATGTGTGACCAGTTCTCCCC AACTAGCAACAAAGGCAACCCATATGTGACCAGTTCTCCCC < 41bp 0.763088490380165 0.545214629585036 0.102957785 0.13132563 prediction 0.435747721590257 Functional Loss - PRPS1 ENSG00000147224 UTR3 Human protein_coding chrX:106893648 chrX:106893651 . . 0 24 hm5C_associated_SNPs_83419 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:106893510-106893749
64251 chr16 69965790 69965790 1 + C T UCEC 69965788 + 69965768 69965808 41 GGCCTGGACTATGGGGGCATCGCCAGGTGAGCTTGAGTGCC GGCCTGGACTATGGGGGCATCGTCAGGTGAGCTTGAGTGCC < 41bp 0.852608386442409 0.634736998463656 0.920612 0.85532355 prediction 0.435742775957506 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69965788 chr16:69965790 nonsynonymous SNV 0.956 3 23 hm5C_associated_SNPs_83421 0 0 3 PPIG POSTAR2 ENCODE chr16:69965734-69965792
64251 chr6 26124616 26124616 1 + G A COAD 26124613 + 26124593 26124633 41 GGGGCAGGCGCGCCGGTGTACCTGGCGGCGGTGTTAGAGTA GGGGCAGGCGCGCCGGTGTACCTAGCGGCGGTGTTAGAGTA < 41bp 0.717866371509009 0.469357883068122 0.83290595 0.58142173 prediction 0.435732743018017 Functional Loss - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124613 chr6:26124616 synonymous SNV . 0 24 hm5C_associated_SNPs_83423 0 0 21 FUS POSTAR2 DRA001158,DRS012384 chr6:26124570-26124624
64251 chr2 135878405 135878405 1 + C T HNSC 135878402 + 135878382 135878422 41 TTCCTAGGGATGTCCTTTAACTCCATTGCCTCCAGTTAGTA TTCCTAGGGATGTCCTTTAACTCTATTGCCTCCAGTTAGTA < 41bp 0.748134824178872 0.530268594125238 0.9312998 0.29947585 prediction 0.435732460107269 Functional Loss - RAB3GAP1 ENSG00000115839 CDS Human protein_coding chr2:135878402 chr2:135878405 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_83424 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr2:135878397-135878416
64251 chr19 16790829 16790829 1 + G A rs142123915 16790826 + 16790806 16790846 41 CTGTCCCGGCGCCACCCCATCGCGTCCTGGCTGTGCGCCAT CTGTCCCGGCGCCACCCCATCGCATCCTGGCTGTGCGCCAT < 41bp 0.808825278932111 0.590959869914098 0.5036386 0.31656528 prediction 0.435730818036027 Functional Loss - TMEM38A ENSG00000072954 CDS Human protein_coding chr19:16790826 chr19:16790829 synonymous SNV . 0 24 hm5C_associated_SNPs_83425 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16790823-16790852
64251 chr9 132995488 132995488 1 + C T rs549973135 132995486 + 132995466 132995506 41 GCTTGTCCGGAAAACGACAACACGAAATGGAAAAGGCTACA GCTTGTCCGGAAAACGACAACATGAAATGGAAAAGGCTACA < 41bp 0.717859743695451 0.463012633805682 0.10204512 0.06580278 prediction 0.435719487390902 Functional Loss - NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132995486 chr9:132995488 . . 0 23 hm5C_associated_SNPs_83430 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:132995487-132995488
64251 chr12 50476001 50476001 1 + G A rs138384202 50475998 + 50475978 50476018 41 TCTCTCACACCATGTGGAATCTCGTGGGGGTCGGGGATCCC TCTCTCACACCATGTGGAATCTCATGGGGGTCGGGGATCCC < 41bp 0.717857013220607 0.483709912072966 0.43486157 0.3920937 prediction 0.435714026441214 Functional Loss - ASIC1 ENSG00000110881 UTR3 Human protein_coding chr12:50475998 chr12:50476001 . . 0 24 hm5C_associated_SNPs_83433 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:50475988-50476031
64251 chr6 7390256 7390256 1 + C T rs112923583 7390254 + 7390234 7390274 41 TCATGGACTACCGGCGGCTTCTCATGAGCCGGGTGGTCCCC TCATGGACTACCGGCGGCTTCTTATGAGCCGGGTGGTCCCC < 41bp 0.803385936964115 0.585532222496569 0.63551617 0.5059965 prediction 0.435707428935092 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7390254 chr6:7390256 synonymous SNV . 0 23 hm5C_associated_SNPs_83435 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7390235-7390279
64251 chr7 152551826 152551826 1 + G C rs187242851 152551822 + 152551802 152551842 41 CCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTCCTCC CCATTTATCCGTGTGCCGACCGCTCTCTGCCAGCCTCCTCC < 41bp 0.717850901653537 0.42105804082936 0.07118556 0.05085963 prediction 0.435701803307074 Functional Loss - ACTR3B ENSG00000133627 UTR3 Human protein_coding chr7:152551822 chr7:152551826 . . 0 25 hm5C_associated_SNPs_83436 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:152551799-152551890
64251 chr2 120704130 120704130 1 + C T ESCA 120704128 + 120704108 120704148 41 GAAGATGCCTGTGATTGTGTCTCGAGTAGCACCAGGAACAC GAAGATGCCTGTGATTGTGTCTTGAGTAGCACCAGGAACAC < 41bp 0.717847229619359 0.420980306898779 0.43204015 0.102608114 prediction 0.435694459238719 Functional Loss - PTPN4 ENSG00000088179 CDS Human protein_coding chr2:120704128 chr2:120704130 stopgain 0.995 1 23 hm5C_associated_SNPs_83440 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:120704106-120704140
64251 chr22 50280391 50280391 1 + G T UCEC 50280389 + 50280369 50280409 41 AGGAGGCGGAGCAGTACAAACAGGATTTAATCAGGGAACTC AGGAGGCGGAGCAGTACAAACATGATTTAATCAGGGAACTC < 41bp 0.897713841682956 0.679870478895414 0.6297743 0.3294444 prediction 0.435686725575084 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50280389 chr22:50280391 nonsynonymous SNV 0.896 1 23 hm5C_associated_SNPs_83445 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50280380-50280400
64251 chr11 607498 607498 1 + G T UCEC 607496 + 607476 607516 41 ACAGACATCTCTGAGCTACCCAGGATACCAAAGATCAGGAG ACAGACATCTCTGAGCTACCCATGATACCAAAGATCAGGAG < 41bp 0.908599671723455 0.690759285750784 0.84645605 0.16101623 prediction 0.435680771945342 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607496 chr11:607498 nonsynonymous SNV 0.989 5 23 hm5C_associated_SNPs_83446 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:607472-607510
64251 chr12 2904210 2904210 1 + G A rs3742077 2904207 + 2904187 2904227 41 CCGCAGTCAGTGCCGCCGCGCCCGGCCTCCCGCACGCCCCG CCGCAGTCAGTGCCGCCGCGCCCAGCCTCCCGCACGCCCCG < 41bp 0.730809836007508 0.512969803888173 0.78117806 0.35542607 prediction 0.435680064238669 Functional Loss - ITFG2-AS1 ENSG00000004478 UTR5 Human protein_coding chr12:2904207 chr12:2904210 . . 0 24 hm5C_associated_SNPs_83447 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:2904140-2904260
64251 chr2 103380846 103380846 1 + G A CESC 103380843 + 103380823 103380863 41 TACCTGTCTCCGTACCCCTTCATGAGAGGCGAGCACAACTC TACCTGTCTCCGTACCCCTTCATAAGAGGCGAGCACAACTC < 41bp 0.791231549451293 0.573392782821243 0.15718636 0.14095452 prediction 0.435677533260099 Functional Loss - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103380843 chr2:103380846 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_83448 0 0 2 YBX3 POSTAR2 ENCODE chr2:103380821-103380882
64251 chr1 162558505 162558505 1 + C T HNSC 162558502 + 162558482 162558522 41 GTGTTTATGAACCTCAGTTGCAGCACCATGTGGCTCAAAAG GTGTTTATGAACCTCAGTTGCAGTACCATGTGGCTCAAAAG < 41bp 0.717980297123279 0.50014179610407 0.09438893 0.10132274 prediction 0.435677002038419 Functional Loss - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162558502 chr1:162558505 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_83449 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:162558490-162558518
64251 chr5 157178442 157178442 1 + G A BLCA 157178439 + 157178419 157178459 41 GTGAACTCCATCGCTGTATCCGTGAGGGGGTGAAGGTGAAT GTGAACTCCATCGCTGTATCCGTAAGGGGGTGAAGGTGAAT < 41bp 0.717826167963545 0.480119599291299 0.4350855 0.46210456 prediction 0.435652335927091 Functional Loss - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157178439 chr5:157178442 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_83453 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr5:157178428-157178448
64251 chr19 5151356 5151356 1 + C T READ 5151354 + 5151334 5151374 41 GCTCTCCCGCAGTCACTGAGCACGGGGGCACCGCAGGAGCC GCTCTCCCGCAGTCACTGAGCATGGGGGCACCGCAGGAGCC < 41bp 0.717818564370001 0.473870540614354 0.6608026 0.6587772 prediction 0.435637128740002 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5151354 chr19:5151356 nonsynonymous SNV 0.589 3 23 hm5C_associated_SNPs_83460 0 0 3 DDX24 POSTAR2 ENCODE chr19:5151353-5151387
64251 chr20 6759097 6759097 1 + G A rs142811428 6759094 + 6759074 6759114 41 ATAAAACCTGCAACAGCCAACTCGAAATTCCCCGTGACCAG ATAAAACCTGCAACAGCCAACTCAAAATTCCCCGTGACCAG < 41bp 0.737062748441907 0.519248256037262 0.5338728 0.16168746 prediction 0.435628984809292 Functional Loss - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6759094 chr20:6759097 synonymous SNV . 0 24 hm5C_associated_SNPs_83463 1 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:6759071-6759097
64251 chr14 52460477 52460477 1 + G A UCEC 52460474 + 52460454 52460494 41 TTAACTGTCCTTTCAAGATTCAAGATCGACAAGAAGCTATT TTAACTGTCCTTTCAAGATTCAAAATCGACAAGAAGCTATT < 41bp 0.755571050624768 0.537761030924706 0.3518031 0.153283 prediction 0.435620039400124 Functional Loss - C14orf166 ENSG00000087302 CDS Human protein_coding chr14:52460474 chr14:52460477 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_83465 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:52460438-52460491
64251 chr19 38867030 38867030 1 + C T UCEC 38867027 + 38867007 38867047 41 TCGGGGCCCAATGGAGCATCCTACGCAAGGACATCCCCTCC TCGGGGCCCAATGGAGCATCCTATGCAAGGACATCCCCTCC < 41bp 0.717807702164524 0.497205328539241 0.115205765 0.21265537 prediction 0.435615404329048 Functional Loss - PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38867027 chr19:38867030 nonsynonymous SNV 0.969 0 24 hm5C_associated_SNPs_83466 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38866980-38867040
64251 chr2 190532189 190532189 1 + G A COAD 190532186 + 190532166 190532206 41 ACTGCAGAAATTAAGAAGAACTCGAATATGTCACTTAATTC ACTGCAGAAATTAAGAAGAACTCAAATATGTCACTTAATTC < 41bp 0.723675033678336 0.505868348648915 0.48628837 0.567696 prediction 0.435613370058843 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190532186 chr2:190532189 nonsynonymous SNV 0.932 0 24 hm5C_associated_SNPs_83468 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:190532101-190532193
64251 chr16 315436 315436 1 + G A rs11248926 315433 + 315413 315453 41 GTAGAAAGAACCAGGGTGTCCCCGGGACAGGCCGTCCCCCA GTAGAAAGAACCAGGGTGTCCCCAGGACAGGCCGTCCCCCA < 41bp 0.78352682412707 0.565722436608976 0.75707877 0.20978904 prediction 0.435608775036189 Functional Loss - FAM234A ENSG00000167930 UTR3 Human protein_coding chr16:315433 chr16:315436 . . 0 24 hm5C_associated_SNPs_83471 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:315380-315442
64251 chr13 111367917 111367917 1 + G T LUAD 111367915 + 111367895 111367935 41 CTGTCTTCTTTTTTCTTTTTCGGGGAGGAGCGGGGTGGAGG CTGTCTTCTTTTTTCTTTTTCGTGGAGGAGCGGGGTGGAGG < 41bp 0.717803294663505 0.362706229607732 0.9185879 0.8408374 prediction 0.43560658932701 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111367915 chr13:111367917 nonsynonymous SNV 0.005 1 23 hm5C_associated_SNPs_83472 0 0 1 NONO POSTAR2 ENCODE chr13:111367917-111367966
64251 chr13 111367918 111367918 1 + G T LUAD 111367915 + 111367895 111367935 41 CTGTCTTCTTTTTTCTTTTTCGGGGAGGAGCGGGGTGGAGG CTGTCTTCTTTTTTCTTTTTCGGTGAGGAGCGGGGTGGAGG < 41bp 0.717803294663505 0.317797881288375 0.9185879 0.405244 prediction 0.43560658932701 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111367915 chr13:111367918 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_83473 0 0 1 NONO POSTAR2 ENCODE chr13:111367917-111367966
64251 chrX 48403286 48403286 1 + G C UCEC 48403282 + 48403262 48403302 41 AGAACTTTGGCATCAGCTACCTGGGCCGGGACCGGCTAGGA AGAACTTTGGCATCAGCTACCTGGCCCGGGACCGGCTAGGA < 41bp 0.717803233824636 0.41823645605334 0.768685 0.10679552 prediction 0.435606467649272 Functional Loss - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48403282 chrX:48403286 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_83474 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:48403257-48403299
64251 chr17 7592204 7592204 1 + G A UCEC 7592201 + 7592181 7592221 41 CAGTTTCTCTCTCCACTCCCCTGGAAACAGAGTTTGGTTCC CAGTTTCTCTCTCCACTCCCCTGAAAACAGAGTTTGGTTCC < 41bp 0.801367112613554 0.583564595561027 0.8756679 0.09153721 prediction 0.435605034105055 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592201 chr17:7592204 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_83475 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7592200-7592238
64251 chr11 120099898 120099898 1 + A C rs558727338 120099897 + 120099877 120099917 41 GCTCTGGGCCCACTGCTCTTCACCAGCCACTAGAGGGGGTG GCTCTGGGCCCACTGCTCTTCCCCAGCCACTAGAGGGGGTG < 41bp 0.806285557313832 0.588489342123534 0.331682 0.22990322 prediction 0.435592430380597 Functional Loss - OAF ENSG00000184232 UTR3 Human protein_coding chr11:120099897 chr11:120099898 . . 0 22 hm5C_associated_SNPs_83477 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:120099860-120099909
64251 chr7 150761314 150761314 1 + G A rs2303929 150761311 + 150761291 150761331 41 AGAGCCAGAGAGCTTGGGCCCTGGGACGCCTGGGTTCCCCG AGAGCCAGAGAGCTTGGGCCCTGAGACGCCTGGGTTCCCCG < 41bp 0.717793670651355 0.465721975675839 0.5901258 0.2625252 prediction 0.435587341302711 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761311 chr7:150761314 nonsynonymous SNV 0.043 1 24 hm5C_associated_SNPs_83482 0 1 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150761292-150761347
64251 chr10 1061784 1061784 1 + G C ESCA 1061780 + 1061760 1061800 41 CTCCCCCGTCCTCTGTGGCCCGGAGTGGGAGTTGCTCTCGA CTCCCCCGTCCTCTGTGGCCCGGACTGGGAGTTGCTCTCGA < 41bp 0.717790818003591 0.429230624914287 0.8388762 0.14934745 prediction 0.435581636007182 Functional Loss - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061780 chr10:1061784 nonsynonymous SNV 0.017 1 25 hm5C_associated_SNPs_83485 0 0 8 BUD13 POSTAR2 ENCODE chr10:1061686-1061794
64251 chr17 73820444 73820444 1 + G C CESC 73820440 + 73820420 73820460 41 TGCGCTGTGTGAGCTCTGCGCTGAGGGCAGCGAGTGCCCCA TGCGCTGTGTGAGCTCTGCGCTGACGGCAGCGAGTGCCCCA < 41bp 0.856308488988425 0.638517909768575 0.35848814 0.36424112 prediction 0.435581158439699 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73820440 chr17:73820444 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_83486 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:73820440-73820460
64251 chr14 74665653 74665653 1 + C T LUAD 74665651 + 74665631 74665671 41 AGATGACACGGGGGAAATTCCTCAATATTCTAGAGAAGCCC AGATGACACGGGGGAAATTCCTTAATATTCTAGAGAAGCCC < 41bp 0.717789993577756 0.433189997359074 0.29831845 0.060721874 prediction 0.435579987155511 Functional Loss - LIN52 ENSG00000205659 CDS Human protein_coding chr14:74665651 chr14:74665653 synonymous SNV . 0 23 hm5C_associated_SNPs_83487 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:74665635-74665663
64251 chr1 1957004 1957004 1 + G A LUSC 1957001 + 1956981 1957021 41 CACCAGAGCTGGCGGGACAGCAGGCTCTCCTACAACCACAC CACCAGAGCTGGCGGGACAGCAGACTCTCCTACAACCACAC < 41bp 0.717788926429253 0.473811715839062 0.882143 0.84495175 prediction 0.435577852858506 Functional Loss - GABRD ENSG00000187730 CDS Human protein_coding chr1:1957001 chr1:1957004 synonymous SNV . 0 24 hm5C_associated_SNPs_83488 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:1957000-1957026
64251 chr5 32739001 32739001 1 + C T COAD 32738999 + 32738979 32739019 41 CATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAA CATGGAAGAGAGGAGACAAACATGACTTTGAAGCTAAGCAA < 41bp 0.862860263759867 0.645072893664836 0.14653078 0.31820053 prediction 0.435574740190062 Functional Loss - NPR3 ENSG00000113389 CDS Human protein_coding chr5:32738999 chr5:32739001 synonymous SNV . 0 23 hm5C_associated_SNPs_83490 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:32738997-32739035
64251 chr4 1374737 1374737 1 + C T STAD 1374735 + 1374715 1374755 41 GCTCGACCCGGAAGACAGGGCTCGTGAGCAGCGGCGGCAGC GCTCGACCCGGAAGACAGGGCTTGTGAGCAGCGGCGGCAGC < 41bp 0.717784623398338 0.455538060216308 0.3100797 0.2875424 prediction 0.435569246796676 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1374735 chr4:1374737 nonsynonymous SNV 0.008 3 23 hm5C_associated_SNPs_83492 0 0 3 BUD13 POSTAR2 ENCODE chr4:1374682-1374743
64251 chr10 71266622 71266622 1 + G A UCEC 71266619 + 71266599 71266639 41 GCTGACGCTGCTGTACATCACCCGGGTGGAGGACATCATCA GCTGACGCTGCTGTACATCACCCAGGTGGAGGACATCATCA < 41bp 0.792213881323071 0.574432174353832 0.31329817 0.20218101 prediction 0.435563413938478 Functional Loss - TSPAN15 ENSG00000099282 CDS Human protein_coding chr10:71266619 chr10:71266622 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_83494 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:71266616-71266651
64251 chr12 109541266 109541266 1 + G A UCEC 109541263 + 109541243 109541283 41 CTCCTTCTCAACGCTGTCCTCACGGTTCGTGCCCATCAAGC CTCCTTCTCAACGCTGTCCTCACAGTTCGTGCCCATCAAGC < 41bp 0.804091750513976 0.58631124321748 0.075023234 0.031193912 prediction 0.435561014592993 Functional Loss - UNG ENSG00000076248 CDS Human protein_coding chr12:109541263 chr12:109541266 synonymous SNV . 0 24 hm5C_associated_SNPs_83495 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:109541237-109541266
64251 chr4 2065566 2065566 1 + G A rs572595075 2065563 + 2065543 2065583 41 CGGGCCCACGAGGAGGACAACACGGTGGAGCTGCTGCGGAT CGGGCCCACGAGGAGGACAACACAGTGGAGCTGCTGCGGAT < 41bp 0.781847569918424 0.564070495428949 0.8338767 0.53843254 prediction 0.435554148978951 Functional Loss - NAT8L ENSG00000185818 CDS Human protein_coding chr4:2065563 chr4:2065566 synonymous SNV . 0 24 hm5C_associated_SNPs_83499 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr4:2065560-2065598
64251 chr10 135165803 135165803 1 + C T UCEC 135165801 + 135165781 135165821 41 CCCTGGGCCATGTCCTGAGTCCCGAGCCCGACCATGACAGC CCCTGGGCCATGTCCTGAGTCCTGAGCCCGACCATGACAGC < 41bp 0.822126007014841 0.604349646088951 0.1589399 0.18632871 prediction 0.435552721851781 Functional Loss - PRAP1 ENSG00000165828;ENSG00000198546 CDS Human other chr10:135165801 chr10:135165803 synonymous SNV . 0 23 hm5C_associated_SNPs_83500 0 0 4 LARP4 POSTAR2 ENCODE chr10:135165761-135165894
64251 chr17 76087633 76087633 1 + C T SKCM 76087630 + 76087610 76087650 41 CCCCAGTGGACGCACCCCAACTCCATGGATAACTTGCCCAG CCCCAGTGGACGCACCCCAACTCTATGGATAACTTGCCCAG < 41bp 0.769006252192744 0.551232756080079 0.9485063 0.9229587 prediction 0.435546992225329 Functional Loss - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76087630 chr17:76087633 synonymous SNV . 0 24 hm5C_associated_SNPs_83502 0 0 1 GRWD1 POSTAR2 ENCODE chr17:76087558-76087686
64251 chr1 20518023 20518023 1 + T C rs540697025 20518022 + 20518002 20518042 41 CAGCTGGGAAGCTTGGGACTCTCGTCTGCACTGCGTGTCCT CAGCTGGGAAGCTTGGGACTCCCGTCTGCACTGCGTGTCCT < 41bp 0.759309053742248 0.541538037427662 0.1396988 0.0986861 prediction 0.435542032629171 Functional Loss - UBXN10 ENSG00000162543 UTR3 Human protein_coding chr1:20518022 chr1:20518023 . . 0 22 hm5C_associated_SNPs_83504 0 0 1 RBM15 POSTAR2 ENCODE chr1:20517952-20518080
64251 chr19 11032431 11032431 1 + T C UCEC 11032430 + 11032410 11032450 41 AACACCATGCACTACGGGAGCTAGGGGCCCGCCCCGCGGAC AACACCATGCACTACGGGAGCCAGGGGCCCGCCCCGCGGAC < 41bp 0.766413101431012 0.548648165381028 0.9010694 0.93790126 prediction 0.435529872099968 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11032430 chr19:11032431 stoploss 0.970 0 22 hm5C_associated_SNPs_83509 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11032418-11032439
64251 chr7 90894707 90894707 1 + C T COAD 90894705 + 90894685 90894725 41 GAGCTCAAGTTCTTCCTGTGCTCCATGTACGCGCCCGTGTG GAGCTCAAGTTCTTCCTGTGCTTCATGTACGCGCCCGTGTG < 41bp 0.717760471036541 0.443218136948302 0.60116756 0.108235 prediction 0.435520942073082 Functional Loss - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90894705 chr7:90894707 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_83512 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:90894704-90894720
64251 chr10 114186049 114186049 1 + G C BLCA 114186045 + 114186025 114186065 41 GTAGGAGTGGTGGTTCCTGACACAGATGTACTTCCCTCATT GTAGGAGTGGTGGTTCCTGACACACATGTACTTCCCTCATT < 41bp 0.71776009207372 0.417221880842076 0.07421252 0.03848067 prediction 0.435520184147441 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114186045 chr10:114186049 nonsynonymous SNV 0.454 2 25 hm5C_associated_SNPs_83513 0 0 1 RPS3 POSTAR2 ENCODE chr10:114186047-114186096
64251 chr11 68377463 68377463 1 + A C BLCA 68377462 + 68377442 68377482 41 GAGGCGAAGTGCGCGGCGCCCAGGCCTCCCAGCAGCAGTCC GAGGCGAAGTGCGCGGCGCCCCGGCCTCCCAGCAGCAGTCC < 41bp 0.802074348687031 0.584319982533514 0.86533284 0.81770825 prediction 0.435508732307035 Functional Loss - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68377462 chr11:68377463 synonymous SNV . 0 22 hm5C_associated_SNPs_83518 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:68377450-68377483
64251 chr2 120005614 120005614 1 + C T STAD 120005612 + 120005592 120005632 41 CGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGC CGGCTGCCCTGCAGCTGCGGCGTGGCACCAAGTACCAGCGC < 41bp 0.717752442128685 0.465174289043506 0.34583282 0.28001904 prediction 0.43550488425737 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005612 chr2:120005614 synonymous SNV . 0 23 hm5C_associated_SNPs_83522 0 0 2 RBM15 POSTAR2 ENCODE chr2:120005548-120005626
64251 chr20 36488339 36488339 1 + C T STAD 36488336 + 36488316 36488356 41 GGAGAGATCATCGACAATGACACCGAGGAGGAGTTCTACCT GGAGAGATCATCGACAATGACACTGAGGAGGAGTTCTACCT < 41bp 0.732510562379683 0.514763654090473 0.25261003 0.2355642 prediction 0.435493816578421 Functional Loss - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488336 chr20:36488339 synonymous SNV . 0 24 hm5C_associated_SNPs_83527 0 0 1 U2AF2 POSTAR2 ENCODE chr20:36488293-36488344
64251 chr12 49760952 49760952 1 + G C rs561289334 49760951 + 49760931 49760971 41 TCTTCTCGGTCTCCGGTGCGCGGGCCGTCTCGCCGCTCGAG TCTTCTCGGTCTCCGGTGCGCCGGCCGTCTCGCCGCTCGAG < 41bp 0.872279632431049 0.654536482376046 0.8873994 0.6506285 prediction 0.435486300110005 Functional Loss - SPATS2 ENSG00000123352 UTR5 Human protein_coding chr12:49760951 chr12:49760952 . . 0 22 hm5C_associated_SNPs_83529 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:49760939-49760962
64251 chr14 23946430 23946430 1 + G A BLCA 23946427 + 23946407 23946447 41 AGGATTAACTATGAGGAGAGCATGATGGTGCGTTTGAGCGT AGGATTAACTATGAGGAGAGCATAATGGTGCGTTTGAGCGT < 41bp 0.717741927390516 0.477948322294479 0.11976862 0.107463986 prediction 0.435483854781033 Functional Loss - NGDN ENSG00000129460 CDS Human protein_coding chr14:23946427 chr14:23946430 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_83531 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:23946412-23946430
64251 chr13 113510353 113510353 1 + G T LUAD 113510351 + 113510331 113510371 41 TTCCTGGAAATCTGCCGGAGCTGCAGCGCGGTGCTCTGCTG TTCCTGGAAATCTGCCGGAGCTTCAGCGCGGTGCTCTGCTG < 41bp 0.717740231606546 0.374485569414824 0.6752198 0.5459418 prediction 0.435480463213092 Functional Loss - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113510351 chr13:113510353 nonsynonymous SNV 0.979 5 23 hm5C_associated_SNPs_83534 0 0 3 EFTUD2 POSTAR2 ENCODE chr13:113510341-113510393
64251 chr2 201757010 201757010 1 + G T UCEC 201757008 + 201756988 201757028 41 TGGAAGGAGCGCCTGGTGATCCGGGCTCTGGAGAACAGAGT TGGAAGGAGCGCCTGGTGATCCTGGCTCTGGAGAACAGAGT < 41bp 0.717713066391429 0.362463407568929 0.8924179 0.27647525 prediction 0.435426132782859 Functional Loss - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201757008 chr2:201757010 nonsynonymous SNV 0.786 0 23 hm5C_associated_SNPs_83559 0 0 3 PPIG POSTAR2 ENCODE chr2:201756976-201757033
64251 chr14 76488726 76488726 1 + G A SKCM 76488723 + 76488703 76488743 41 GGAGGCTGGGCAGGTGATTCCGTGAAGGCTTCGAAGTGAGT GGAGGCTGGGCAGGTGATTCCGTAAAGGCTTCGAAGTGAGT < 41bp 0.71770515999641 0.471044960741153 0.7000237 0.3697266 prediction 0.435410319992821 Functional Loss - IFT43 ENSG00000119650 CDS Human protein_coding chr14:76488723 chr14:76488726 synonymous SNV . 0 24 hm5C_associated_SNPs_83565 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:76488686-76488736
64251 chr6 27114998 27114998 1 + G A STAD 27114995 + 27114975 27115015 41 GGCTTCAGTTCCCCGTGGGCCGAGTGCACCGCCTGCTCCGC GGCTTCAGTTCCCCGTGGGCCGAATGCACCGCCTGCTCCGC < 41bp 0.794082284203277 0.576379459659214 0.89759326 0.8564801 prediction 0.435405649088126 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114995 chr6:27114998 nonsynonymous SNV 0.123 3 24 hm5C_associated_SNPs_83569 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr1 110581904 110581904 1 + C T BLCA 110581902 + 110581882 110581922 41 GGAGAAGAGACTCAAGGTGGCTCGAGCAATTCTCTATGTTG GGAGAAGAGACTCAAGGTGGCTTGAGCAATTCTCTATGTTG < 41bp 0.743185608827043 0.525488712383711 0.15235859 0.0995217 prediction 0.435393792886663 Functional Loss - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110581902 chr1:110581904 stopgain 0.995 1 23 hm5C_associated_SNPs_83573 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:110581895-110581915
64251 chr11 64136986 64136986 1 + G T BLCA 64136984 + 64136964 64137004 41 TGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAA TGGAGCACATCCGCAAGAAGCGTCACTTCAGCGAGTCGGAA < 41bp 0.717696291773602 0.369045077260915 0.53522956 0.14587006 prediction 0.435392583547203 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64136984 chr11:64136986 synonymous SNV . 0 23 hm5C_associated_SNPs_83574 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:64136980-64137008
64251 chr15 41762563 41762563 1 + G A GBM 41762560 + 41762540 41762580 41 TGAAAAGTCAGACCGCTCATCACGAACATCATCGTCTGATG TGAAAAGTCAGACCGCTCATCACAAACATCATCGTCTGATG < 41bp 0.78371777404426 0.566021557830372 0.26053718 0.10590038 prediction 0.435392432427776 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41762560 chr15:41762563 nonsynonymous SNV 0.412 2 24 hm5C_associated_SNPs_83575 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:41762558-41762579
64251 chr15 44086132 44086132 1 + C T BLCA 44086130 + 44086110 44086150 41 CCCTTTTGTGCTTCCTTCCCCTCAGGTAGCCTCTCTCCCCC CCCTTTTGTGCTTCCTTCCCCTTAGGTAGCCTCTCTCCCCC < 41bp 0.813358913564294 0.595667060210058 0.1077615 0.17293608 prediction 0.435383706708472 Functional Loss - SERF2 ENSG00000140264 CDS Human protein_coding chr15:44086130 chr15:44086132 stopgain 1.000 0 23 hm5C_associated_SNPs_83576 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:44085948-44086197
64251 chr7 27856612 27856612 1 + A T THCA 27856608 + 27856588 27856628 41 TGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTG TGTTGTCTGCAGCCAGCCTGCTCGTAACTTTAGTCGGCCTG < 41bp 0.906908816395126 0.689219428539391 0.3845304 0.15520847 prediction 0.43537877571147 Functional Loss - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27856608 chr7:27856612 synonymous SNV . 0 25 hm5C_associated_SNPs_83580 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:27856588-27856665
64251 chr3 185335352 185335352 1 + C T UCEC 185335350 + 185335330 185335370 41 TGCTTTCAAATTGCGAATTACTCGAGGAGATATTCAGACAT TGCTTTCAAATTGCGAATTACTTGAGGAGATATTCAGACAT < 41bp 0.878381605992543 0.660695510636533 0.84194344 0.68242705 prediction 0.435372190712021 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185335350 chr3:185335352 stopgain 0.949 1 23 hm5C_associated_SNPs_83581 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:185335336-185335381
64251 chr19 11172511 11172511 1 + C T rs199852385 11172509 + 11172489 11172529 41 CTGAGCCCCGACATTCCAGTCTCGACCCCGAGCCCCTCGTT CTGAGCCCCGACATTCCAGTCTTGACCCCGAGCCCCTCGTT < 41bp 0.717682906725538 0.467682775526933 0.2241674 0.04158154 prediction 0.435365813451077 Functional Loss - SMARCA4 ENSG00000127616 UTR3 Human protein_coding chr19:11172509 chr19:11172511 . . 0 23 hm5C_associated_SNPs_83584 1 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:11172471-11172511
64251 chr2 128183782 128183782 1 + G A UCEC 128183779 + 128183759 128183799 41 CTCATTGATGGGAAGATGACCAGGCGGGGAGACAGCCCCTG CTCATTGATGGGAAGATGACCAGACGGGGAGACAGCCCCTG < 41bp 0.799206550379703 0.581529582505409 0.88080686 0.80434835 prediction 0.435353935748587 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128183779 chr2:128183782 synonymous SNV . 0 24 hm5C_associated_SNPs_83586 0 0 6 GRWD1 POSTAR2 ENCODE chr2:128183757-128183794
64251 chr16 3339479 3339479 1 + C T GBM 3339477 + 3339457 3339497 41 GGTGCTGCTTCCTGACCAGGCCCGAGGGGAGGTGCCCTGGA GGTGCTGCTTCCTGACCAGGCCTGAGGGGAGGTGCCCTGGA < 41bp 0.838750066175694 0.621073112969957 0.12830728 0.27666488 prediction 0.435353906411473 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339477 chr16:3339479 stopgain 0.100 0 23 hm5C_associated_SNPs_83587 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3339457-3339503
64251 chr13 100634864 100634864 1 + G A rs200407312 100634861 + 100634841 100634881 41 CTCAACGGGCAGATGCGCCTCGGGCTGCCCGGCGAGGTGTT CTCAACGGGCAGATGCGCCTCGGACTGCCCGGCGAGGTGTT < 41bp 0.717668721005565 0.464689826581218 0.88010406 0.57812446 prediction 0.435337442011129 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634861 chr13:100634864 synonymous SNV . 0 24 hm5C_associated_SNPs_83591 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:100634834-100634872
64251 chr19 1043092 1043092 1 + G A CESC 1043089 + 1043069 1043109 41 TCGGGCACTGCTGCAGAGACCCCGAGGGACCAGCGGCCCCC TCGGGCACTGCTGCAGAGACCCCAAGGGACCAGCGGCCCCC < 41bp 0.717666210800781 0.472362937660818 0.57519346 0.3220057 prediction 0.435332421601563 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1043089 chr19:1043092 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_83592 0 0 7 DDX24 POSTAR2 ENCODE chr19:1043062-1043111
64251 chr4 160252653 160252653 1 + G A UCEC 160252650 + 160252630 160252670 41 TGAAGGAGATCCTGCAATGACTCGATTTTTAGAAGAATTTG TGAAGGAGATCCTGCAATGACTCAATTTTTAGAAGAATTTG < 41bp 0.726608608939654 0.508944815028406 0.19718778 0.06693119 prediction 0.435327587822495 Functional Loss - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160252650 chr4:160252653 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_83594 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr4:160252649-160252670
64251 chr3 9782575 9782575 1 + C T CESC 9782572 + 9782552 9782592 41 CACGGAATGGGGTCCCATTGCTACGTCGCCTGCAGACACAC CACGGAATGGGGTCCCATTGCTATGTCGCCTGCAGACACAC < 41bp 0.717660439075829 0.495631008186495 0.2750533 0.24054849 prediction 0.435320878151657 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9782572 chr3:9782575 nonsynonymous SNV 0.969 4 24 hm5C_associated_SNPs_83595 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:9782553-9782576
64251 chr19 39207732 39207732 1 + G T LUSC 39207729 + 39207709 39207749 41 GCTTCTGTGGCCCACAGCTCCTGGAGTGGATCCGGCGCACC GCTTCTGTGGCCCACAGCTCCTGTAGTGGATCCGGCGCACC < 41bp 0.933708343765677 0.716050636625984 0.8751449 0.27480417 prediction 0.435315414279386 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39207729 chr19:39207732 stopgain 1.000 1 24 hm5C_associated_SNPs_83597 0 0 13 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:39207720-39207740
64251 chr2 74757512 74757512 1 + G T LUAD 74757509 + 74757489 74757529 41 TGTTGTTGTGGGGCGGGGGTCGGGGTCCTCCGGCCGTCCTC TGTTGTTGTGGGGCGGGGGTCGGTGTCCTCCGGCCGTCCTC < 41bp 0.913268676226733 0.695622551816749 0.9432615 0.87930524 prediction 0.435292248819968 Functional Loss - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757509 chr2:74757512 nonsynonymous SNV 0.959 2 24 hm5C_associated_SNPs_83603 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74757490-74757543
64251 chr12 34175705 34175705 1 + G T LUAD 34175703 + 34175683 34175723 41 AGGGCCATTTCTCCCTTTCCCAGGTGGGGTCCCCAACCTGT AGGGCCATTTCTCCCTTTCCCATGTGGGGTCCCCAACCTGT < 41bp 0.909614621238529 0.69197010469707 0.915498 0.40104935 prediction 0.435289033082918 Functional Loss - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175703 chr12:34175705 nonsynonymous SNV 0.888 1 23 hm5C_associated_SNPs_83605 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:34175690-34175716
64251 chr19 15763421 15763421 1 + G T UCEC 15763419 + 15763399 15763439 41 GTCCGATGAGGACATAAGAGCAGAAGCTGACACCTTTATGT GTCCGATGAGGACATAAGAGCATAAGCTGACACCTTTATGT < 41bp 0.717638552197026 0.360114996004348 0.40043235 0.15840963 prediction 0.435277104394051 Functional Loss - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15763419 chr19:15763421 stopgain 0.998 0 23 hm5C_associated_SNPs_83609 0 0 7 BUD13 POSTAR2 ENCODE chr19:15763352-15763421
64251 chr3 10960060 10960060 1 + G T UCEC 10960056 + 10960036 10960076 41 CTGAACAGCGGCACCAGCTTCGTGGCTGGGTTTGCCATCTT CTGAACAGCGGCACCAGCTTCGTGTCTGGGTTTGCCATCTT < 41bp 0.718793157603823 0.501157288806746 0.3297733 0.13298985 prediction 0.435271737594154 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10960056 chr3:10960060 nonsynonymous SNV 0.932 1 25 hm5C_associated_SNPs_83611 0 0 1 SND1 POSTAR2 ENCODE chr3:10960027-10960079
64251 chr16 1543462 1543462 1 + G A rs559238487 1543459 + 1543439 1543479 41 AAAACCCGCGGGAGCCTCGCCCGGACCCAGGAACTCGTGCT AAAACCCGCGGGAGCCTCGCCCGAACCCAGGAACTCGTGCT < 41bp 0.724958209180823 0.507328349411616 0.91046417 0.8792195 prediction 0.435259719538415 Functional Loss - TELO2 ENSG00000100726 UTR5 Human protein_coding chr16:1543459 chr16:1543462 . . 0 24 hm5C_associated_SNPs_83615 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:1543460-1543480
64251 chr10 124184459 124184459 1 + G A UCEC 124184456 + 124184436 124184476 41 CTTTGAAATTGTAACAACGTCTCGAACTTTCTATGTGCAGG CTTTGAAATTGTAACAACGTCTCAAACTTTCTATGTGCAGG < 41bp 0.720885619637258 0.503257419619637 0.3046143 0.082416624 prediction 0.435256400035241 Functional Loss - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124184456 chr10:124184459 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_83616 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:124184446-124184469
64251 chrX 154467476 154467476 1 + T C rs782272269 154467475 + 154467455 154467495 41 ATCGGCTGATGTTACTCTCACTTGATGTGGTTAAACCATTT ATCGGCTGATGTTACTCTCACCTGATGTGGTTAAACCATTT < 41bp 0.731440988259074 0.5138138948603 0.25367075 0.28659612 prediction 0.435254186797549 Functional Loss - VBP1 ENSG00000155959 UTR3 Human protein_coding chrX:154467475 chrX:154467476 . . 0 22 hm5C_associated_SNPs_83618 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:154467298-154467704
64251 chr22 46727066 46727066 1 + C T rs528999765 46727064 + 46727044 46727084 41 ACGGCGTCTGCTGGGCAGGCCTCGGGGAGGACCCCTCAGCT ACGGCGTCTGCTGGGCAGGCCTTGGGGAGGACCCCTCAGCT < 41bp 0.760939227037478 0.543319482567263 0.7832451 0.70245713 prediction 0.435239488940429 Functional Loss - GTSE1 ENSG00000075218 downstream Human protein_coding chr22:46727064 chr22:46727066 . . 0 23 hm5C_associated_SNPs_83622 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr22:46727034-46727071
64251 chr19 44635194 44635194 1 + G A UCEC 44635191 + 44635171 44635211 41 ATGCAGGACTATCTATAATTCACGTAAGACAGAAACCTTCT ATGCAGGACTATCTATAATTCACATAAGACAGAAACCTTCT < 41bp 0.73445321375138 0.51683990654458 0.521398 0.22524896 prediction 0.435226614413601 Functional Loss - ZNF225 ENSG00000256294 CDS Human protein_coding chr19:44635191 chr19:44635194 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_83624 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:44635170-44635194
64251 chr15 74468969 74468969 1 + G T rs553448603 74468966 + 74468946 74468986 41 GAGGCTCCCTGGGGCCTGCTCAAGCTCCTCCTGCTCCTTGC GAGGCTCCCTGGGGCCTGCTCAATCTCCTCCTGCTCCTTGC < 41bp 0.717612459025717 0.34993684267109 0.8832469 0.7760099 prediction 0.435224918051434 Functional Loss - ISLR ENSG00000261543 ncRNA_intronic Human antisense chr15:74468966 chr15:74468969 . . 0 24 hm5C_associated_SNPs_83626 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chr15:74468936-74468974
64251 chr11 125476251 125476251 1 + T C COAD 125476250 + 125476230 125476270 41 ACTTAATTCCTCTCCACGTCCTCGTGCTGATGCTCACAGGC ACTTAATTCCTCTCCACGTCCCCGTGCTGATGCTCACAGGC < 41bp 0.717612424961369 0.449844574225366 0.10822025 0.079202324 prediction 0.435224849922738 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125476250 chr11:125476251 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_83627 0 0 24 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:125476219-125476253
64251 chr12 27933686 27933686 1 + G A KICH 27933683 + 27933663 27933703 41 TACCGCCTGGCGCAGGTGTACGGGCTGCCCGACCTGCAGGA TACCGCCTGGCGCAGGTGTACGGACTGCCCGACCTGCAGGA < 41bp 0.813425290948856 0.595817547450331 0.8534949 0.3912816 prediction 0.435215486997049 Functional Loss - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933683 chr12:27933686 synonymous SNV . 0 24 hm5C_associated_SNPs_83630 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:27933662-27933689
64251 chr14 95030158 95030158 1 + T C LUSC 95030157 + 95030137 95030177 41 CTTCAACCTCACCGAGCTGTCTGAGTCCGATGTCCATAGGG CTTCAACCTCACCGAGCTGTCCGAGTCCGATGTCCATAGGG < 41bp 0.761813573120601 0.544206366089381 0.25157398 0.60021496 prediction 0.435214414062439 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030157 chr14:95030158 synonymous SNV . 0 22 hm5C_associated_SNPs_83631 0 0 3 RPS3 POSTAR2 ENCODE chr14:95030108-95030217
64251 chr1 198711060 198711060 1 + C T UCEC 198711058 + 198711038 198711078 41 AGTTCACCAGCTGGCCAGACCACGGGGTGCCTGAGGATCCT AGTTCACCAGCTGGCCAGACCATGGGGTGCCTGAGGATCCT < 41bp 0.717604005161411 0.439571848254142 0.8562335 0.72517467 prediction 0.435208010322822 Functional Loss - PTPRC ENSG00000081237 CDS Human protein_coding chr1:198711058 chr1:198711060 synonymous SNV . 0 23 hm5C_associated_SNPs_83632 0 0 3 PUM2 POSTAR2 ENCODE chr1:198710996-198711083
64251 chr6 121768024 121768024 1 + C T SKCM 121768021 + 121768001 121768041 41 ACTGGAGCGCCTTAGGCAAACTCCTTGACAAGGTTCAAGCC ACTGGAGCGCCTTAGGCAAACTCTTTGACAAGGTTCAAGCC < 41bp 0.745177673361492 0.527581523872281 0.09351084 0.07691589 prediction 0.435192298978423 Functional Loss - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768021 chr6:121768024 nonsynonymous SNV 0.938 5 24 hm5C_associated_SNPs_83638 1 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:121768020-121768040
64251 chr5 110428167 110428167 1 + T C UCEC 110428166 + 110428146 110428186 41 GCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCAG GCGGCGGCAATGGAACGGGCCCCAGAAAGGCGCACGGCCAG < 41bp 0.7349776334269 0.517381787405747 0.3221892 0.23692167 prediction 0.435191692042308 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110428166 chr5:110428167 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_83639 0 0 7 DDX3X POSTAR2 ENCODE chr5:110428039-110428268
64251 chr1 156347994 156347994 1 + G A LGG 156347991 + 156347971 156348011 41 GGTCAAGGTCAGCCTCTGAGCCAGGAGCGTGGGGGTGGGGG GGTCAAGGTCAGCCTCTGAGCCAAGAGCGTGGGGGTGGGGG < 41bp 0.717593593205062 0.462708326988449 0.8584839 0.45423263 prediction 0.435187186410125 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156347991 chr1:156347994 synonymous SNV . 0 24 hm5C_associated_SNPs_83642 0 0 9 EFTUD2 POSTAR2 ENCODE chr1:156347973-156348122
64251 chr6 34735713 34735713 1 + T C GBM 34735712 + 34735692 34735732 41 ATTTCAACAAGGAAAGATACCTCCTACTCCATTCTCTGCTC ATTTCAACAAGGAAAGATACCCCCTACTCCATTCTCTGCTC < 41bp 0.717591234566892 0.451059819270576 0.031855583 0.015894264 prediction 0.435182469133784 Functional Loss - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34735712 chr6:34735713 synonymous SNV . 0 22 hm5C_associated_SNPs_83646 0 0 27 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:34735680-34735720
64251 chr2 191745874 191745874 1 + A C HNSC 191745870 + 191745850 191745890 41 CTCCTGCGGTCGCCCGCCGGCGTGAGCGCGACTCTGCGGCG CTCCTGCGGTCGCCCGCCGGCGTGCGCGCGACTCTGCGGCG < 41bp 0.90769270148336 0.690104697464387 0.48032704 0.17021549 prediction 0.435176008037947 Functional Loss - GLS ENSG00000115419 CDS Human protein_coding chr2:191745870 chr2:191745874 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_83648 0 0 2 RPS3 POSTAR2 ENCODE chr2:191745812-191745898
64251 chr14 53184843 53184843 1 + G A UCEC 53184840 + 53184820 53184860 41 CACGAGCCGTTGCTAGCCAGCTGGACTGCAATTTCTTAAAG CACGAGCCGTTGCTAGCCAGCTGAACTGCAATTTCTTAAAG < 41bp 0.748796943309534 0.531211813780245 0.5794259 0.47669014 prediction 0.435170259058578 Functional Loss - PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53184840 chr14:53184843 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_83649 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:53184811-53184847
64251 chr8 86389403 86389403 1 + T C rs703 86389402 + 86389382 86389422 41 CGTGGCCTCCTTCCTGAATCCTTGGATTACTGGACCTACCC CGTGGCCTCCTTCCTGAATCCCTGGATTACTGGACCTACCC < 41bp 0.717584834082299 0.464298417645975 0.16454533 0.15073484 prediction 0.435169668164598 Functional Loss - CA2 ENSG00000104267 CDS Human protein_coding chr8:86389402 chr8:86389403 synonymous SNV . 0 22 hm5C_associated_SNPs_83650 2 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:86389360-86389420
64251 chr5 176079809 176079809 1 + C T SKCM 176079806 + 176079786 176079826 41 ACAGGGATCCTGGCCTTTGTCTTCAAGGACTGGATTCGAGA ACAGGGATCCTGGCCTTTGTCTTTAAGGACTGGATTCGAGA < 41bp 0.717583278610399 0.483475267615659 0.24350688 0.058778435 prediction 0.435166557220799 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079806 chr5:176079809 synonymous SNV . 0 24 hm5C_associated_SNPs_83651 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176079764-176079809
64251 chr9 115422119 115422119 1 + C T LUAD 115422116 + 115422096 115422136 41 TCTACAAGTACATGTACATCCACCGGCCGCCCACCCAAATG TCTACAAGTACATGTACATCCACTGGCCGCCCACCCAAATG < 41bp 0.726272762681913 0.508692542692861 0.16883752 0.09217045 prediction 0.435160439978103 Functional Loss - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115422116 chr9:115422119 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_83652 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:115422100-115422120
64251 chr20 49576176 49576176 1 + G T STAD 49576173 + 49576153 49576193 41 GGAAGTGCTGAAAATCGCTGCGGGTCTGGGCCCCTCTTACA GGAAGTGCTGAAAATCGCTGCGGTTCTGGGCCCCTCTTACA < 41bp 0.717575753017957 0.317331160316929 0.7371781 0.32348716 prediction 0.435151506035915 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576173 chr20:49576176 nonsynonymous SNV 0.204 2 24 hm5C_associated_SNPs_83655 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:49576162-49576193
64251 chr8 19811636 19811636 1 + G A UCEC 19811633 + 19811613 19811653 41 GCTTTTTTCCCTTTTAAGGCCTCGATCCAGCTGGACCTAAC GCTTTTTTCCCTTTTAAGGCCTCAATCCAGCTGGACCTAAC < 41bp 0.71757421625655 0.487066387211117 0.109297186 0.009395421 prediction 0.4351484325131 Functional Loss - LPL ENSG00000175445 CDS Human protein_coding chr8:19811633 chr8:19811636 nonsynonymous SNV 0.733 5 24 hm5C_associated_SNPs_83657 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:19811633-19811656
64251 chr17 45009463 45009463 1 + G T LUAD 45009461 + 45009441 45009481 41 ACCAGTTAAAGTATGATGTCCAGCACCTGCAGACTGCGCTC ACCAGTTAAAGTATGATGTCCATCACCTGCAGACTGCGCTC < 41bp 0.717571567049569 0.368275502609699 0.06981793 0.05403042 prediction 0.435143134099138 Functional Loss - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45009461 chr17:45009463 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_83659 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45009424-45009488
64251 chr17 45009464 45009464 1 + C T LUAD 45009461 + 45009441 45009481 41 ACCAGTTAAAGTATGATGTCCAGCACCTGCAGACTGCGCTC ACCAGTTAAAGTATGATGTCCAGTACCTGCAGACTGCGCTC < 41bp 0.717571567049569 0.493381423901845 0.06981793 0.10778338 prediction 0.435143134099138 Functional Loss - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45009461 chr17:45009464 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83660 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45009424-45009488
64251 chr4 38665818 38665818 1 + G A rs113071828 38665815 + 38665795 38665835 41 ACCCCGCCAGCCCCGGGAGGCTCGCAGAGCGAGCGGCGCCG ACCCCGCCAGCCCCGGGAGGCTCACAGAGCGAGCGGCGCCG < 41bp 0.727365453431573 0.509795131085229 0.29637983 0.2580894 prediction 0.43514064469269 Functional Loss - KLF3-AS1 ENSG00000231160 ncRNA_exonic Human processed_transcript chr4:38665815 chr4:38665818 . . 0 24 hm5C_associated_SNPs_83661 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr4:38665817-38665818
64251 chr11 114278483 114278483 1 + G T OV 114278481 + 114278461 114278501 41 TGGAGCCATGACTATGATAACAGAAGAGACAGTAGTAGAGA TGGAGCCATGACTATGATAACATAAGAGACAGTAGTAGAGA < 41bp 0.869254239137931 0.651696673431041 0.7996474 0.43944034 prediction 0.435115131413781 Functional Loss - RBM7 ENSG00000076053 CDS Human protein_coding chr11:114278481 chr11:114278483 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_83665 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:114278427-114278483
64251 chr19 42729223 42729223 1 + T C UCEC 42729222 + 42729202 42729242 41 AGGGCACCCACTTTGACTCCCTAGAGAAAGAGGAGCGCAAT AGGGCACCCACTTTGACTCCCCAGAGAAAGAGGAGCGCAAT < 41bp 0.795615136813711 0.578058308783474 0.10581496 0.54687524 prediction 0.435113656060474 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729222 chr19:42729223 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_83667 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:42729222-42729223
64251 chr7 128490051 128490051 1 + G A SKCM 128490048 + 128490028 128490068 41 AGGCGTGTGACCCCCTGCCGCACGAGGAGGAGCCCTCTGAA AGGCGTGTGACCCCCTGCCGCACAAGGAGGAGCCCTCTGAA < 41bp 0.717552575040563 0.477340512321388 0.5068029 0.36889905 prediction 0.435105150081126 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128490048 chr7:128490051 nonsynonymous SNV 0.196 1 24 hm5C_associated_SNPs_83670 0 0 9 DDX24 POSTAR2 ENCODE chr7:128490006-128490070
64251 chr19 41089338 41089338 1 + C T UCEC 41089336 + 41089316 41089356 41 CAGCCCATCACCAGTTATGACGCGGCAGGCTCCTTCCTCCT CAGCCCATCACCAGTTATGACGTGGCAGGCTCCTTCCTCCT < 41bp 0.831192760151032 0.61364220642498 0.89480585 0.87969637 prediction 0.435101107452105 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41089336 chr19:41089338 nonsynonymous SNV 0.026 2 23 hm5C_associated_SNPs_83671 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:41089329-41089352
64251 chr16 70162962 70162962 1 + G A SKCM 70162959 + 70162939 70162979 41 TGGTGGGGGCCATGCATGTTCCCGAGGATGCAGTGGTGTCT TGGTGGGGGCCATGCATGTTCCCAAGGATGCAGTGGTGTCT < 41bp 0.804408165450351 0.586871361200953 0.3768705 0.23650464 prediction 0.435073608498795 Functional Loss - PDPR ENSG00000090857 CDS Human protein_coding chr16:70162959 chr16:70162962 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_83680 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:70162944-70162971
64251 chr17 18225991 18225991 1 + G A UCEC 18225988 + 18225968 18226008 41 CTGAGCCGCTACAGCCGCTACACGAGCATCCTGGACCTTGA CTGAGCCGCTACAGCCGCTACACAAGCATCCTGGACCTTGA < 41bp 0.768981201118506 0.551449105967919 0.8812778 0.6353084 prediction 0.435064190301174 Functional Loss - SMCR8 ENSG00000176994 CDS Human protein_coding chr17:18225988 chr17:18225991 synonymous SNV . 0 24 hm5C_associated_SNPs_83682 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:18225950-18226047
64251 chr2 201397742 201397742 1 + G A UCEC 201397739 + 201397719 201397759 41 AACTGGCTCACTTTTTACCTCAGGAATTAAGAGACATTTGA AACTGGCTCACTTTTTACCTCAGAAATTAAGAGACATTTGA < 41bp 0.745019885873495 0.527501620859408 0.6366546 0.3746665 prediction 0.435036530028174 Functional Loss - SGO2 ENSG00000163535 CDS Human protein_coding chr2:201397739 chr2:201397742 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_83687 0 0 2 DDX3X POSTAR2 ENCODE chr2:201397695-201397795
64251 chr19 6534897 6534897 1 + G A PAAD 6534894 + 6534874 6534914 41 GCCTCCTCCGAGGCTCGGAACTCGGCCTTCGGTTTCCAGGG GCCTCCTCCGAGGCTCGGAACTCAGCCTTCGGTTTCCAGGG < 41bp 0.821711754119955 0.604194482456514 0.394918 0.22098926 prediction 0.435034543326883 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6534894 chr19:6534897 synonymous SNV . 0 24 hm5C_associated_SNPs_83690 0 0 5 SND1 POSTAR2 ENCODE chr19:6534808-6534976
64251 chr12 108960978 108960978 1 + T C LUSC 108960977 + 108960957 108960997 41 GCCTCTCAGGTGGAGGAAGCCTTGACTATCAAAAACACAGA GCCTCTCAGGTGGAGGAAGCCCTGACTATCAAAAACACAGA < 41bp 0.717516036386594 0.452813317026627 0.045809627 0.09585899 prediction 0.435032072773188 Functional Loss - ISCU ENSG00000136003 CDS Human protein_coding chr12:108960977 chr12:108960978 synonymous SNV . 0 22 hm5C_associated_SNPs_83691 0 0 3 PPIG POSTAR2 ENCODE chr12:108960960-108960985
64251 chr7 129096460 129096460 1 + C T STAD 129096457 + 129096437 129096477 41 TGGCACCCCCACCCTCCAAGCTGCGAGGCCGCCGTGGCTCT TGGCACCCCCACCCTCCAAGCTGTGAGGCCGCCGTGGCTCT < 41bp 0.739931645614611 0.522418003391582 0.39469573 0.58051324 prediction 0.435027284446057 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129096457 chr7:129096460 stopgain 1.000 1 24 hm5C_associated_SNPs_83693 0 0 5 DDX24 POSTAR2 ENCODE chr7:129096403-129096472
64251 chr22 25011077 25011077 1 + C T SKCM 25011075 + 25011055 25011095 41 TTTGCCACCATGTTCAACAGCTCGGAGCAGTCCCAGAAGGG TTTGCCACCATGTTCAACAGCTTGGAGCAGTCCCAGAAGGG < 41bp 0.717513240210743 0.454916982187974 0.2805156 0.41512603 prediction 0.435026480421487 Functional Loss - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25011075 chr22:25011077 nonsynonymous SNV 0.509 0 23 hm5C_associated_SNPs_83694 0 0 1 SND1 POSTAR2 ENCODE chr22:25011069-25011094
64251 chr5 98115767 98115767 1 + G A UCEC 98115764 + 98115744 98115784 41 GACAAACGTACCTGTGGTCCCTGGATCCAGTGCTACTGCTA GACAAACGTACCTGTGGTCCCTGAATCCAGTGCTACTGCTA < 41bp 0.755803537593409 0.538290994260766 0.5801873 0.26119804 prediction 0.435025086665288 Functional Loss - RGMB ENSG00000174136 CDS Human protein_coding chr5:98115764 chr5:98115767 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_83695 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:98115737-98115768
64251 chr16 81685954 81685954 1 + G A PAAD 81685951 + 81685931 81685971 41 CAGGCCCCACTGGAAATCGTCTCGAAACTGCTCTCAGAGGT CAGGCCCCACTGGAAATCGTCTCAAAACTGCTCTCAGAGGT < 41bp 0.717509908167396 0.478610561394922 0.95571625 0.2854756 prediction 0.435019816334792 Functional Loss - CMIP ENSG00000153815 CDS Human protein_coding chr16:81685951 chr16:81685954 synonymous SNV . 0 24 hm5C_associated_SNPs_83698 0 0 2 BUD13 POSTAR2 ENCODE chr16:81685841-81685980
64251 chr16 81685953 81685953 1 + C T UCEC 81685951 + 81685931 81685971 41 CAGGCCCCACTGGAAATCGTCTCGAAACTGCTCTCAGAGGT CAGGCCCCACTGGAAATCGTCTTGAAACTGCTCTCAGAGGT < 41bp 0.717509908167396 0.408721120187126 0.95571625 0.32137913 prediction 0.435019816334792 Functional Loss - CMIP ENSG00000153815 CDS Human protein_coding chr16:81685951 chr16:81685953 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_83699 0 0 2 BUD13 POSTAR2 ENCODE chr16:81685841-81685980
64251 chr2 101611898 101611898 1 + G A SKCM 101611895 + 101611875 101611915 41 CCTCTTTGCACAGTGAGCAGCAGGACTCGCTACTTCTCTCC CCTCTTTGCACAGTGAGCAGCAGAACTCGCTACTTCTCTCC < 41bp 0.771992326593443 0.554489714753357 0.7860867 0.64745444 prediction 0.435005223680172 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101611895 chr2:101611898 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_83702 0 0 2 PRPF8 POSTAR2 ENCODE chr2:101611860-101611917
64251 chr1 222835656 222835656 1 + G A LUSC 222835653 + 222835633 222835673 41 TCAAGAGGCTCTTCCCCTACCAGGGTACTCGATGAAGGCAA TCAAGAGGCTCTTCCCCTACCAGAGTACTCGATGAAGGCAA < 41bp 0.717502302325006 0.476551434372657 0.91013265 0.81256974 prediction 0.435004604650012 Functional Loss - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222835653 chr1:222835656 synonymous SNV . 0 24 hm5C_associated_SNPs_83703 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:222835631-222835666
64251 chr4 106888416 106888416 1 + G A rs35613262 106888413 + 106888393 106888433 41 CTGCACGCTTGGTGCTACCTCTCGGCCGCCTCATGCATTCA CTGCACGCTTGGTGCTACCTCTCAGCCGCCTCATGCATTCA < 41bp 0.811063042984977 0.593565288630667 0.07520962 0.053241163 prediction 0.43499550870862 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106888413 chr4:106888416 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_83705 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:106888400-106888429
64251 chr1 1269329 1269329 1 + T C CESC 1269328 + 1269308 1269348 41 TGCCTGCGGGGGCCCTGGGCCTGGCTGGTGGTGCTGCTGGC TGCCTGCGGGGGCCCTGGGCCCGGCTGGTGGTGCTGCTGGC < 41bp 0.731480693998928 0.513988198988555 0.44518405 0.4749424 prediction 0.434984990020746 Functional Loss - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269328 chr1:1269329 nonsynonymous SNV 0.574 5 22 hm5C_associated_SNPs_83708 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:1269301-1269334
64251 chr14 106951152 106951152 1 + G A rs144068070 106951149 + 106951129 106951169 41 AGGTTGCAGTAAGCTGAGATCGCGTCACTGCACTCCTGCCT AGGTTGCAGTAAGCTGAGATCGCATCACTGCACTCCTGCCT < 41bp 0.717491320681935 0.484263234142227 0.77735734 0.72359145 prediction 0.43498264136387 Functional Loss - LINC00221 ENSG00000187156 ncRNA_exonic Human other chr14:106951149 chr14:106951152 . . 0 24 hm5C_associated_SNPs_83712 0 0 1 UPF1 POSTAR2 ENCODE chr14:106951050-106951193
64251 chr4 1730328 1730328 1 + G A rs144517485 1730325 + 1730305 1730345 41 GGACCCCCCCATGCCAGCTTCTCGGGGCTCTTACCACCTCG GGACCCCCCCATGCCAGCTTCTCAGGGCTCTTACCACCTCG < 41bp 0.717490824958938 0.454566527428248 0.85277975 0.33725852 prediction 0.434981649917876 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730325 chr4:1730328 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83713 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:1730300-1730340
64251 chr4 1730327 1730327 1 + C T UCEC 1730325 + 1730305 1730345 41 GGACCCCCCCATGCCAGCTTCTCGGGGCTCTTACCACCTCG GGACCCCCCCATGCCAGCTTCTTGGGGCTCTTACCACCTCG < 41bp 0.717490824958938 0.445185596803006 0.85277975 0.69819975 prediction 0.434981649917876 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730325 chr4:1730327 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_83714 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:1730300-1730340
64251 chr1 110884731 110884731 1 + G C PRAD 110884730 + 110884710 110884750 41 TTAAAGCAAAAGCAGGCAGCCGGGGTGATCAGCCTCCCTGT TTAAAGCAAAAGCAGGCAGCCCGGGTGATCAGCCTCCCTGT < 41bp 0.875000091226724 0.657515275719232 0.9188024 0.91834867 prediction 0.434969631014985 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884730 chr1:110884731 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_83717 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:110884680-110884740
64251 chr19 57743956 57743956 1 + C T SKCM 57743953 + 57743933 57743973 41 ATAACTATTTCCATGATGCACGCCGGGTGTACCTGATTCTG ATAACTATTTCCATGATGCACGCTGGGTGTACCTGATTCTG < 41bp 0.723830442908222 0.506347218867974 0.018993378 0.016176999 prediction 0.434966448080496 Functional Loss - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743953 chr19:57743956 nonsynonymous SNV 0.001 4 24 hm5C_associated_SNPs_83718 0 0 1 ZNF622 POSTAR2 ENCODE chr19:57743948-57744043
64251 chr12 9086561 9086561 1 + C T SKCM 9086558 + 9086538 9086578 41 AATGCTTCCTGCCAAGGCATCTCCAGTAGCAGAAAGCCCAA AATGCTTCCTGCCAAGGCATCTCTAGTAGCAGAAAGCCCAA < 41bp 0.78503852156109 0.567559514766351 0.9394526 0.5497326 prediction 0.434958013589479 Functional Loss - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9086558 chr12:9086561 nonsynonymous SNV 0.981 3 24 hm5C_associated_SNPs_83719 0 0 1 PPIG POSTAR2 ENCODE chr12:9086521-9086609
64251 chr1 43241101 43241101 1 + G A STAD 43241098 + 43241078 43241118 41 ACAAACAGCTCTCACAGGACCTGGCTGTCAACCTCCTTGTT ACAAACAGCTCTCACAGGACCTGACTGTCAACCTCCTTGTT < 41bp 0.717474247153136 0.492574324621633 0.10176319 0.067100614 prediction 0.434948494306272 Functional Loss - C1orf50 ENSG00000164008;ENSG00000164008 UTR5;UTR3 Human other chr1:43241098 chr1:43241101 . . 0 24 hm5C_associated_SNPs_83722 0 0 1 YBX3 POSTAR2 ENCODE chr1:43241004-43241126
64251 chr3 152554259 152554259 1 + T C rs78522095 152554258 + 152554238 152554278 41 GTGGCCATGTTCTGTGTCCCCTTGGTGCTGATTCTGGGCTG GTGGCCATGTTCTGTGTCCCCCTGGTGCTGATTCTGGGCTG < 41bp 0.753756200568189 0.53628392319885 0.2235691 0.28477687 prediction 0.434944554738678 Functional Loss - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152554258 chr3:152554259 synonymous SNV . 0 22 hm5C_associated_SNPs_83724 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:152554243-152554266
64251 chr4 77227995 77227995 1 + G A SKCM 77227992 + 77227972 77228012 41 CACTTTTCGTTTGGCTGCTGCGGGGCGGCCCTGGCGACACC CACTTTTCGTTTGGCTGCTGCGGAGCGGCCCTGGCGACACC < 41bp 0.809417469039942 0.591946169874437 0.8889365 0.607802 prediction 0.434942598331011 Functional Loss - STBD1 ENSG00000118804 CDS Human protein_coding chr4:77227992 chr4:77227995 nonsynonymous SNV 0.185 1 24 hm5C_associated_SNPs_83726 0 0 1 DDX3X POSTAR2 ENCODE chr4:77227979-77228024
64251 chr19 40480314 40480314 1 + G A UCEC 40480311 + 40480291 40480331 41 CACTGGTGGACGTGCTGCCCCCCGAAGCCGACAGCAGCATC CACTGGTGGACGTGCTGCCCCCCAAAGCCGACAGCAGCATC < 41bp 0.804202308455172 0.586738193665108 0.041030705 0.02821067 prediction 0.434928229580129 Functional Loss - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480311 chr19:40480314 nonsynonymous SNV 0.939 4 24 hm5C_associated_SNPs_83729 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40480288-40480320
64251 chrX 74494117 74494117 1 + T C UCEC 74494116 + 74494096 74494136 41 ACGGAGTTACAGTGTCCGGACTCCATGCCCTGTCACAACCA ACGGAGTTACAGTGTCCGGACCCCATGCCCTGTCACAACCA < 41bp 0.817144479501218 0.599684884374896 0.93590343 0.0616737 prediction 0.434919190252644 Functional Loss - UPRT ENSG00000094841 CDS Human protein_coding chrX:74494116 chrX:74494117 nonsynonymous SNV 0.947 0 22 hm5C_associated_SNPs_83730 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:74494117-74494132
64251 chr16 72143405 72143405 1 + G A STAD 72143402 + 72143382 72143422 41 CGTGAAACAGGCGGGCAAGTCACGGCAGGTGAGGATTCTGT CGTGAAACAGGCGGGCAAGTCACAGCAGGTGAGGATTCTGT < 41bp 0.791918489724074 0.574465104840883 0.7650378 0.46483004 prediction 0.434906769766383 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72143402 chr16:72143405 nonsynonymous SNV 0.877 2 24 hm5C_associated_SNPs_83732 0 0 3 EIF3H POSTAR2 ENCODE chr16:72143378-72143410
64251 chr5 14607518 14607518 1 + C T UCEC 14607516 + 14607496 14607536 41 GGTCCTGAGAAGTATACAGGCTCGAATGTGTTTGGAAAACT GGTCCTGAGAAGTATACAGGCTTGAATGTGTTTGGAAAACT < 41bp 0.717448330173988 0.412598277721781 0.09141755 0.1198982 prediction 0.434896660347977 Functional Loss - FAM105A ENSG00000145569 CDS Human protein_coding chr5:14607516 chr5:14607518 nonsynonymous SNV 0.926 0 23 hm5C_associated_SNPs_83735 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:14607507-14607533
64251 chr8 56698434 56698434 1 + C T UCEC 56698431 + 56698411 56698451 41 ACTTCAATTTGGTAGGATAACTGCACATAAGGATTTTGAGG ACTTCAATTTGGTAGGATAACTGTACATAAGGATTTTGAGG < 41bp 0.721913567080057 0.504467863819354 0.050068438 0.057326376 prediction 0.434891406521404 Functional Loss - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56698431 chr8:56698434 nonsynonymous SNV 0.897 0 24 hm5C_associated_SNPs_83737 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:56698412-56698439
64251 chr9 139253380 139253380 1 + G A rs576042225 139253377 + 139253357 139253397 41 GACATTCCAAAACCCCAAGCCAGGAAAAAGGGCAGGGCCTG GACATTCCAAAACCCCAAGCCAGAAAAAAGGGCAGGGCCTG < 41bp 0.75208486753028 0.534640518022512 0.55538166 0.481732 prediction 0.434888699015538 Functional Loss - GPSM1 ENSG00000160360 UTR3 Human protein_coding chr9:139253377 chr9:139253380 . . 0 24 hm5C_associated_SNPs_83740 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:139253357-139253386
64251 chr11 66373280 66373280 1 + C T COAD 66373278 + 66373258 66373298 41 GAGGAGCGAGGCCGGCCCATCGCTGGCAAGGGCCGAAAGGA GAGGAGCGAGGCCGGCCCATCGTTGGCAAGGGCCGAAAGGA < 41bp 0.717440525112257 0.466244280227828 0.079853326 0.060174882 prediction 0.434881050224514 Functional Loss - CCS ENSG00000173992 CDS Human protein_coding chr11:66373278 chr11:66373280 nonsynonymous SNV 0.942 2 23 hm5C_associated_SNPs_83741 0 0 1 DDX55 POSTAR2 ENCODE chr11:66373209-66373285
64251 chr3 101284124 101284124 1 + G A SKCM 101284121 + 101284101 101284141 41 AAGCAAAAAATATCAAGCTGCTAGAAACCACTGAGGAAGAT AAGCAAAAAATATCAAGCTGCTAAAAACCACTGAGGAAGAT < 41bp 0.717439423324486 0.499337977357647 0.13095754 0.43927482 prediction 0.434878846648971 Functional Loss - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101284121 chr3:101284124 nonsynonymous SNV 0.884 2 24 hm5C_associated_SNPs_83742 0 0 13 MOV10 POSTAR2 GSE37524,GSM921128 chr3:101284103-101284124
64251 chrX 40457953 40457953 1 + T C LUAD 40457952 + 40457932 40457972 41 GGTTGACCTGCTCTTTCTTTCTGAACTGCAAGTGCTACATG GGTTGACCTGCTCTTTCTTTCCGAACTGCAAGTGCTACATG < 41bp 0.789125753204917 0.571687184297614 0.2661994 0.41183454 prediction 0.434877137814606 Functional Loss - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40457952 chrX:40457953 synonymous SNV . 0 22 hm5C_associated_SNPs_83743 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:40457945-40457970
64251 chr17 41177413 41177413 1 + G C CESC 41177409 + 41177389 41177429 41 AAGATCGTGGTGGTGGGAGACGCAGAGTGCGGCAAGACGGC AAGATCGTGGTGGTGGGAGACGCACAGTGCGGCAAGACGGC < 41bp 0.717419049709889 0.423418529639616 0.8524087 0.38065305 prediction 0.434838099419778 Functional Loss - RND2 ENSG00000108830 CDS Human protein_coding chr17:41177409 chr17:41177413 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_83752 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41177389-41177434
64251 chr14 101350875 101350875 1 + G A LIHC 101350872 + 101350852 101350892 41 GTGGATCCTCTATTTCCTTACGTGGGCCACTGGATGGCTCC GTGGATCCTCTATTTCCTTACGTAGGCCACTGGATGGCTCC < 41bp 0.77260622330664 0.555192554638827 0.7924559 0.37963623 prediction 0.434827337335628 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101350872 chr14:101350875 nonsynonymous SNV 0.921 2 24 hm5C_associated_SNPs_83758 0 0 1 DGCR8 POSTAR2 ENCODE chr14:101350867-101350899
64251 chr1 44365285 44365285 1 + C T UCEC 44365283 + 44365263 44365303 41 CGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGG CGACACTGCGCATCACCTACCCTGAGGGCGCCATGCAGCGG < 41bp 0.790432891692357 0.573020531336695 0.10341391 0.09048501 prediction 0.434824720711323 Functional Loss - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44365283 chr1:44365285 synonymous SNV . 0 23 hm5C_associated_SNPs_83759 0 0 4 DDX24 POSTAR2 ENCODE chr1:44365207-44365320
64251 chr19 55998756 55998756 1 + A T rs188942102 55998752 + 55998732 55998772 41 CGACTCCGCCTCCCTGGGACCTGGATTGGGTCAGATGCCTG CGACTCCGCCTCCCTGGGACCTGGTTTGGGTCAGATGCCTG < 41bp 0.862677811676464 0.645267035244338 0.7964357 0.67634773 prediction 0.434821552864251 Functional Loss - NAT14 ENSG00000090971 UTR3 Human protein_coding chr19:55998752 chr19:55998756 . . 0 25 hm5C_associated_SNPs_83762 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:55998740-55998760
64251 chr11 118253407 118253407 1 + C T UCEC 118253404 + 118253384 118253424 41 CCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGC CCTTGGTATCCAGTGTGTTCCACTGGAAACGTGTGTTCTGC < 41bp 0.738055643706918 0.520648690121401 0.15114015 0.13215211 prediction 0.434813907171034 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118253404 chr11:118253407 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83764 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:118253386-118253418
64251 chr9 139888341 139888341 1 + C T rs569763397 139888339 + 139888319 139888359 41 GGCCCCCATCAGAGACCCCCCGCCACCACCTCCACCTGCCT GGCCCCCATCAGAGACCCCCCGTCACCACCTCCACCTGCCT < 41bp 0.761504712101732 0.544108839666488 0.14441791 0.056338638 prediction 0.434791744870488 Functional Loss - C9orf142 ENSG00000148362 UTR3 Human protein_coding chr9:139888339 chr9:139888341 . . 0 23 hm5C_associated_SNPs_83769 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139888229-139888366
64251 chrX 47069480 47069480 1 + G A UCEC 47069477 + 47069457 47069497 41 CACCACTGGCACACCCAGTACTCGAACAACATCCGGCAGCT CACCACTGGCACACCCAGTACTCAAACAACATCCGGCAGCT < 41bp 0.801723993084495 0.584331368176698 0.9018315 0.8840312 prediction 0.434785249815595 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47069477 chrX:47069480 synonymous SNV . 0 24 hm5C_associated_SNPs_83773 1 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:47069460-47069496
64251 chr19 36640769 36640769 1 + T C rs14100 36640768 + 36640748 36640788 41 GCCCCAGACCCGCCCCCTCACTGCCTTGCTATAGGAGTCAC GCCCCAGACCCGCCCCCTCACCGCCTTGCTATAGGAGTCAC < 41bp 0.717389515108003 0.490712780684312 0.10349867 0.13909808 prediction 0.434779030216006 Functional Loss - CAPNS1 ENSG00000126247 UTR3 Human protein_coding chr19:36640768 chr19:36640769 . . 0 22 hm5C_associated_SNPs_83777 0 0 19 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:36640758-36640779
64251 chr2 112785952 112785952 1 + G A SKCM 112785949 + 112785929 112785969 41 TATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGA TATGAAATAATGTACTCTTGCTGAAGAACCGATCCCTTAGA < 41bp 0.761600171540261 0.544211662409451 0.46043813 0.16392234 prediction 0.43477701826162 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112785949 chr2:112785952 stopgain 0.977 0 24 hm5C_associated_SNPs_83779 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:112785937-112785959
64251 chrX 64951020 64951020 1 + G T LUSC 64951018 + 64950998 64951038 41 ACCAGTGGGAGGAGCGGATCCAGGTGTGGCATGAGGAACAC ACCAGTGGGAGGAGCGGATCCATGTGTGGCATGAGGAACAC < 41bp 0.912812030614455 0.69542521720298 0.8471083 0.17898849 prediction 0.434773626822951 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64951018 chrX:64951020 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_83782 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:64950970-64951029
64251 chr10 75550818 75550818 1 + G A CESC 75550815 + 75550795 75550835 41 TGCTGCGCCCTCTGAGGGGCCGTGAGCCAGAGGGCGTCTGG TGCTGCGCCCTCTGAGGGGCCGTAAGCCAGAGGGCGTCTGG < 41bp 0.717386068204622 0.481198536165067 0.3863158 0.33950096 prediction 0.434772136409245 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75550815 chr10:75550818 nonsynonymous SNV 0.876 3 24 hm5C_associated_SNPs_83783 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:75550801-75550824
64251 chr1 1431050 1431050 1 + G A rs138274487 1431047 + 1431027 1431067 41 CTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTG CTCACCTCATGGAGCCTGGCCACAGACCCCTCCTACCCCTG < 41bp 0.717380218697513 0.460801009595783 0.014282256 0.08131629 prediction 0.434760437395025 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1431047 chr1:1431050 synonymous SNV . 0 24 hm5C_associated_SNPs_83786 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:1431019-1431050
64251 chrX 135288624 135288624 1 + G A UCEC 135288621 + 135288601 135288641 41 AAGTTTGACTGCCACTACTGCAGGGATCCCTTGCAGGGGAA AAGTTTGACTGCCACTACTGCAGAGATCCCTTGCAGGGGAA < 41bp 0.780458571065188 0.563082341281122 0.90349466 0.80593085 prediction 0.434752459568133 Functional Loss - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135288621 chrX:135288624 synonymous SNV . 0 24 hm5C_associated_SNPs_83788 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:135288579-135288633
64251 chr22 35782827 35782827 1 + G A UCEC 35782824 + 35782804 35782844 41 CAGGACCTGGCCTTCTGGTACGGGCCCCGCTGGCAGGAGGT CAGGACCTGGCCTTCTGGTACGGACCCCGCTGGCAGGAGGT < 41bp 0.717373847504648 0.45492381570879 0.86409044 0.50850546 prediction 0.434747695009296 Functional Loss - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35782824 chr22:35782827 synonymous SNV . 0 24 hm5C_associated_SNPs_83789 0 0 2 DDX3X POSTAR2 ENCODE chr22:35782821-35782873
64251 chr2 157407157 157407157 1 + G A STAD 157407154 + 157407134 157407174 41 GCCAAATGTGTTATCAATGCCACGGGACCTTTCACGGACTC GCCAAATGTGTTATCAATGCCACAGGACCTTTCACGGACTC < 41bp 0.767121852938346 0.5497486646706 0.12724358 0.15128896 prediction 0.434746376535493 Functional Loss - GPD2 ENSG00000115159 CDS Human protein_coding chr2:157407154 chr2:157407157 synonymous SNV . 0 24 hm5C_associated_SNPs_83790 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr2:157407145-157407179
64251 chr22 38616145 38616145 1 - C T rs75292970 38616148 - 38616128 38616168 41 GCTCCTGACTTAGGAAGAGCCTCGTGTCACAACACGTGTCC GCTCCTGACTTAGGAAGAGCCTCATGTCACAACACGTGTCC < 41bp 0.742344755412015 0.524972794484757 0.54416186 0.4068626 prediction 0.434743921854517 Functional Loss - TMEM184B ENSG00000198792 UTR3 Human protein_coding chr22:38616148 chr22:38616145 . . 0 24 hm5C_associated_SNPs_83792 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chr22:38616140-38616160
64251 chr19 17430861 17430861 1 + C T rs144729786 17430859 + 17430839 17430879 41 GGCCGGGCGACAGGGGCGGGCCCGGGGTGGCCTGACCTACC GGCCGGGCGACAGGGGCGGGCCTGGGGTGGCCTGACCTACC < 41bp 0.717368277721808 0.488899462108262 0.87739295 0.8764774 prediction 0.434736555443616 Functional Loss - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17430859 chr19:17430861 . . 0 23 hm5C_associated_SNPs_83797 0 0 4 DDX55 POSTAR2 ENCODE chr19:17430829-17430883
64251 chr1 154233514 154233514 1 + A C BRCA 154233513 + 154233493 154233533 41 CTGCCTCCTGGCTACAGTTACACCAGCCTGCCATACTATAC CTGCCTCCTGGCTACAGTTACCCCAGCCTGCCATACTATAC < 41bp 0.717356600089852 0.464578261011859 0.1885927 0.24564692 prediction 0.434713200179705 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154233513 chr1:154233514 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_83803 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154233440-154233516
64251 chr15 36872017 36872017 1 + G A UCEC 36872014 + 36871994 36872034 41 CACCAAGGCTACTTGAGCCCCAGGGTGTTTTTTCCTTGTTC CACCAAGGCTACTTGAGCCCCAGAGTGTTTTTTCCTTGTTC < 41bp 0.75600884896249 0.538653841247671 0.8272126 0.3756742 prediction 0.434710015429639 Functional Loss - C15orf41 ENSG00000186073 UTR5 Human protein_coding chr15:36872014 chr15:36872017 . . 0 24 hm5C_associated_SNPs_83804 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:36871990-36872023
64251 chrX 46713334 46713334 1 + G A STAD 46713331 + 46713311 46713351 41 ACAATACATGGAGTAACATTCATGACTTTACACCTGTGTCA ACAATACATGGAGTAACATTCATAACTTTACACCTGTGTCA < 41bp 0.717354745095527 0.487507063449045 0.2558792 0.12824252 prediction 0.434709490191054 Functional Loss - RP2 ENSG00000102218 CDS Human protein_coding chrX:46713331 chrX:46713334 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_83806 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:46713302-46713345
64251 chr13 96443190 96443190 1 + G T SARC 96443188 + 96443168 96443208 41 GCAGAGAGCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAG GCAGAGAGCCAGCAAGGAGGCGTCGGCAACCCTTTCCACAG < 41bp 0.901794993271592 0.684441113723777 0.7444049 0.22911263 prediction 0.434707759095629 Functional Loss - DNAJC3 ENSG00000102580 CDS Human protein_coding chr13:96443188 chr13:96443190 nonsynonymous SNV 0.642 2 23 hm5C_associated_SNPs_83807 0 0 4 SND1 POSTAR2 ENCODE chr13:96443141-96443190
64251 chr5 72359713 72359713 1 + C T UCEC 72359710 + 72359690 72359730 41 TGTAGGCACCATTGTCCCACCTCCGAGGCCTGCTTCCAGAC TGTAGGCACCATTGTCCCACCTCTGAGGCCTGCTTCCAGAC < 41bp 0.76533606177052 0.547982868559033 0.2066426 0.072125375 prediction 0.434706386422976 Functional Loss - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72359710 chr5:72359713 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83808 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:72359687-72359725
64251 chr16 83992923 83992923 1 + G A rs559047552 83992920 + 83992900 83992940 41 CTCTCCGGCTACACACCCTACACGAAGCCAGATGCCATCCA CTCTCCGGCTACACACCCTACACAAAGCCAGATGCCATCCA < 41bp 0.80349787423581 0.586146891873684 0.083920956 0.020955265 prediction 0.434701964724252 Functional Loss - OSGIN1 ENSG00000140961 CDS Human protein_coding chr16:83992920 chr16:83992923 synonymous SNV . 0 24 hm5C_associated_SNPs_83810 0 0 1 GRWD1 POSTAR2 ENCODE chr16:83992870-83992970
64251 chr1 15382643 15382643 1 + C T SKCM 15382640 + 15382620 15382660 41 GTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGGT GTCCCCAAGCGGCATTCCCTCGCTATGCCGGGCGAGACGGT < 41bp 0.717349595098949 0.494522021395217 0.8959669 0.29785186 prediction 0.434699190197898 Functional Loss - KAZN ENSG00000189337 CDS Human protein_coding chr1:15382640 chr1:15382643 synonymous SNV . 0 24 hm5C_associated_SNPs_83811 0 0 2 GRWD1 POSTAR2 ENCODE chr1:15382603-15382716
64251 chr14 70459159 70459159 1 + G A SKCM 70459156 + 70459136 70459176 41 GACGGGTCTAAGCCGACACCCACGATGGAGACCCAGCCGGT GACGGGTCTAAGCCGACACCCACAATGGAGACCCAGCCGGT < 41bp 0.80920477989028 0.59185570647232 0.20821229 0.087898284 prediction 0.43469814683592 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70459156 chr14:70459159 synonymous SNV . 0 24 hm5C_associated_SNPs_83812 0 0 1 BUD13 POSTAR2 ENCODE chr14:70459118-70459198
64251 chr3 23960701 23960701 1 + C T COAD 23960699 + 23960679 23960719 41 TATTCTAGGAGCGAGCTGGACGCCACTGTGGGGCTCTGAGA TATTCTAGGAGCGAGCTGGACGTCACTGTGGGGCTCTGAGA < 41bp 0.717344562447917 0.426134193965721 0.28121603 0.3631033 prediction 0.434689124895833 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23960699 chr3:23960701 synonymous SNV . 0 23 hm5C_associated_SNPs_83815 0 0 70 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:23960680-23960720
64251 chr19 994248 994248 1 + G A rs200235925 994245 + 994225 994265 41 GCCAGGACCAGCTGCGCGTCCGTGTGACGGAGCTGGAGGAC GCCAGGACCAGCTGCGCGTCCGTATGACGGAGCTGGAGGAC < 41bp 0.785796082743117 0.568456218142563 0.31586918 0.34565198 prediction 0.434679729201108 Functional Loss - WDR18 ENSG00000065268 CDS Human protein_coding chr19:994245 chr19:994248 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_83818 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:994240-994260
64251 chr1 198711119 198711119 1 + G T LUAD 198711117 + 198711097 198711137 41 AGAAGGAGAGTGAATGCCTTCAGCAATTTCTTCAGTGGTCC AGAAGGAGAGTGAATGCCTTCATCAATTTCTTCAGTGGTCC < 41bp 0.717338326951968 0.393904915439794 0.20223531 0.050394952 prediction 0.434676653903936 Functional Loss - PTPRC ENSG00000081237 CDS Human protein_coding chr1:198711117 chr1:198711119 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_83820 0 0 1 ZNF622 POSTAR2 ENCODE chr1:198711108-198711155
64251 chr2 27016122 27016122 1 + G T LUAD 27016120 + 27016100 27016140 41 GTGCAACTGGCCCGGAGGATCCGGGGCCTTGAGGAGGGACT GTGCAACTGGCCCGGAGGATCCTGGGCCTTGAGGAGGGACT < 41bp 0.717332563289242 0.352720973066032 0.9062766 0.24390376 prediction 0.434665126578485 Functional Loss - CENPA ENSG00000115163 CDS Human protein_coding chr2:27016120 chr2:27016122 nonsynonymous SNV 0.841 4 23 hm5C_associated_SNPs_83825 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:27016120-27016140
64251 chr9 37429744 37429744 1 + G A rs12002324 37429741 + 37429721 37429761 41 TGCTCTAGGCCAGGCCATTGCTCGGCGTCTGAAACCATTCG TGCTCTAGGCCAGGCCATTGCTCAGCGTCTGAAACCATTCG < 41bp 0.80311605765715 0.585785634908725 0.7542422 0.4835907 prediction 0.434660845496851 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37429741 chr9:37429744 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_83827 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:37429736-37429765
64251 chr8 126019705 126019705 1 + G T COAD 126019702 + 126019682 126019722 41 GTTGTGATGGGAGTTCAGTACAAGGATAAAGAGACTGGAGA GTTGTGATGGGAGTTCAGTACAATGATAAAGAGACTGGAGA < 41bp 0.717327067729046 0.323254584986496 0.5998373 0.26670897 prediction 0.434654135458092 Functional Loss - SQLE ENSG00000104549 CDS Human protein_coding chr8:126019702 chr8:126019705 nonsynonymous SNV 0.835 0 24 hm5C_associated_SNPs_83829 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:126019660-126019718
64251 chr12 54447762 54447762 1 + C T LUSC 54447759 + 54447739 54447779 41 CTACATCGATCCGAAATTTCCTCCATGCGAAGAATATTCGC CTACATCGATCCGAAATTTCCTCTATGCGAAGAATATTCGC < 41bp 0.756217766500945 0.538890705109747 0.96502125 0.94411325 prediction 0.434654122782396 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54447759 chr12:54447762 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83830 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:54447712-54447763
64251 chr1 2235368 2235368 1 + C T UCEC 2235365 + 2235345 2235385 41 GCAGAAGGTTGTGAGCAGCCCTCCGTGTGCCGCCGCCGTCT GCAGAAGGTTGTGAGCAGCCCTCTGTGTGCCGCCGCCGTCT < 41bp 0.717325213062279 0.499641929560106 0.84345686 0.48524398 prediction 0.434650426124558 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2235365 chr1:2235368 nonsynonymous SNV 0.007 4 24 hm5C_associated_SNPs_83832 1 0 1 FXR2 POSTAR2 ENCODE chr1:2235361-2235398
64251 chr8 39068779 39068779 1 + C T rs202074832 39068776 + 39068756 39068796 41 GCCACAAATGCAAAAAAAATCTCCGAAACCAGTCTGTGGCA GCCACAAATGCAAAAAAAATCTCTGAAACCAGTCTGTGGCA < 41bp 0.719799601345694 0.502474964791436 0.35586375 0.14082393 prediction 0.434649273108516 Functional Loss - ADAM32 ENSG00000197140 CDS Human protein_coding chr8:39068776 chr8:39068779 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83833 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:39068772-39068802
64251 chr17 7466888 7466888 1 + G T UCEC 7466885 + 7466865 7466905 41 CGGCGGGGCCTCGCACACCCCAAGAACCATCTTTCACCCCA CGGCGGGGCCTCGCACACCCCAATAACCATCTTTCACCCCA < 41bp 0.923344090814753 0.706021659100273 0.46658352 0.18530977 prediction 0.434644863428961 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466885 chr17:7466888 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_83834 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr17:7466880-7466900
64251 chr1 114184787 114184787 1 + G A HNSC 114184784 + 114184764 114184804 41 TTAAGCCAGGAGCAATGGTTCTGGAGCAGAATGGAAAATCG TTAAGCCAGGAGCAATGGTTCTGAAGCAGAATGGAAAATCG < 41bp 0.74164593087255 0.52432504159679 0.43799707 0.28086525 prediction 0.43464177855152 Functional Loss - MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114184784 chr1:114184787 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_83835 0 0 1 EIF3H POSTAR2 ENCODE chr1:114184751-114184873
64251 chr16 57714199 57714199 1 + T C LIHC 57714198 + 57714178 57714218 41 GACCACTGGAGACTGGTCTTCTGAGGGCTGCTCCACGGAGG GACCACTGGAGACTGGTCTTCCGAGGGCTGCTCCACGGAGG < 41bp 0.783126978025636 0.565810168530729 0.7138386 0.9154786 prediction 0.434633618989814 Functional Loss - ADGRG3 ENSG00000182885 CDS Human protein_coding chr16:57714198 chr16:57714199 synonymous SNV . 0 22 hm5C_associated_SNPs_83838 0 0 1 DDX59 POSTAR2 ENCODE chr16:57714147-57714204
64251 chr9 38396528 38396528 1 + C T rs150776963 38396525 + 38396505 38396545 41 GATGTTGACAAAGTTGCCTTCACCGGTTCCACCGAGGTGGG GATGTTGACAAAGTTGCCTTCACTGGTTCCACCGAGGTGGG < 41bp 0.717314656558389 0.499743793206554 0.13014263 0.15704864 prediction 0.434629313116778 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396525 chr9:38396528 synonymous SNV . 0 24 hm5C_associated_SNPs_83839 1 0 2 RBM15 POSTAR2 ENCODE chr9:38396516-38396559
64251 chr19 14674017 14674017 1 + G T SARC 14674015 + 14673995 14674035 41 CCCTGCGCCTGTGCTTCCCCCAGGTGGAGCCCCACGCCACC CCCTGCGCCTGTGCTTCCCCCATGTGGAGCCCCACGCCACC < 41bp 0.717312802246145 0.355044989797106 0.9319228 0.7810573 prediction 0.434625604492291 Functional Loss - TECR ENSG00000099797;ENSG00000099797 exonic;splicing Human other chr19:14674015 chr19:14674017 nonsynonymous SNV 0.811 0 23 hm5C_associated_SNPs_83841 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:14674000-14674020
64251 chr6 160196340 160196340 1 + G A ESCA 160196337 + 160196317 160196357 41 TGTACCAGTTTTGGTGTCAACTAGAAAAGGTGAGTATATCA TGTACCAGTTTTGGTGTCAACTAAAAAAGGTGAGTATATCA < 41bp 0.732584834554387 0.515272633776098 0.19944388 0.13611272 prediction 0.434624401556579 Functional Loss - ACAT2 ENSG00000120437 CDS Human protein_coding chr6:160196337 chr6:160196340 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_83842 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr6:160196318-160196340
64251 chr14 39583588 39583588 1 + C T BLCA 39583586 + 39583566 39583606 41 CGCAGTGGAAGAGTTGATGCCTCGGCTATTGCCGGTAGAGC CGCAGTGGAAGAGTTGATGCCTTGGCTATTGCCGGTAGAGC < 41bp 0.813996058740251 0.596685576194676 0.1381442 0.09832615 prediction 0.43462096509115 Functional Loss - GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39583586 chr14:39583588 nonsynonymous SNV 0.945 4 23 hm5C_associated_SNPs_83843 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:39583548-39583602
64251 chr20 48808576 48808576 1 + G T BLCA 48808573 + 48808553 48808593 41 GGAACTTGTTCAAGCAGCTGCCCGAGCCCCTGCTCGCCTCC GGAACTTGTTCAAGCAGCTGCCCTAGCCCCTGCTCGCCTCC < 41bp 0.71730560782064 0.338460716850694 0.46320322 0.34275016 prediction 0.43461121564128 Functional Loss - CEBPB ENSG00000172216 CDS Human protein_coding chr20:48808573 chr20:48808576 stopgain 1.000 0 24 hm5C_associated_SNPs_83845 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:48808560-48808580
64251 chrX 17768162 17768162 1 + C T SKCM 17768159 + 17768139 17768179 41 GTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGC GTCAAGGCGTGAGAATAATTCCCTGAGCAACCTTCCAAGGC < 41bp 0.717294989398619 0.499278128376923 0.15426567 0.14104652 prediction 0.434589978797238 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768159 chrX:17768162 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_83850 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr19 6531171 6531171 1 + G A rs2234174 6531168 + 6531148 6531188 41 GGCTGCTGCTGCTGCTGCTGCTCGCTGCCGCCTGCGCCGTC GGCTGCTGCTGCTGCTGCTGCTCACTGCCGCCTGCGCCGTC < 41bp 0.823099782530787 0.605808491474495 0.15675253 0.12725401 prediction 0.434582582112583 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6531168 chr19:6531171 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_83852 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:6531140-6531196
64251 chr16 85689518 85689518 1 + G A STAD 85689515 + 85689495 85689535 41 GAGCGCATGTCTGGCCTCAGCGCGGAGAGGTAAGTGCGTCT GAGCGCATGTCTGGCCTCAGCGCAGAGAGGTAAGTGCGTCT < 41bp 0.809015557367227 0.591729978955634 0.8798058 0.44325197 prediction 0.434571156823186 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689515 chr16:85689518 synonymous SNV . 0 24 hm5C_associated_SNPs_83856 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:85689506-85689592
64251 chr7 30655629 30655629 1 + C T UCEC 30655626 + 30655606 30655646 41 TATTCAGCAAAAGCCCAGGTCAGCGGACAGTCCGCTCGGAA TATTCAGCAAAAGCCCAGGTCAGTGGACAGTCCGCTCGGAA < 41bp 0.732907716693307 0.515625699276717 0.7479406 0.34039634 prediction 0.43456403483318 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30655626 chr7:30655629 synonymous SNV . 0 24 hm5C_associated_SNPs_83858 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr7:30655600-30655645
64251 chr9 137024297 137024297 1 + G A rs75331293 137024294 + 137024274 137024314 41 CAGCAGTTAACAGCAGAGGCCGAGCGGGAGCCTCTGGGGAG CAGCAGTTAACAGCAGAGGCCGAACGGGAGCCTCTGGGGAG < 41bp 0.782131282947659 0.564849931027976 0.43802497 0.2776369 prediction 0.434562703839367 Functional Loss - WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137024294 chr9:137024297 . . 0 24 hm5C_associated_SNPs_83859 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:137024284-137024323
64251 chr6 143793364 143793364 1 + G A LGG 143793361 + 143793341 143793381 41 AACTAAAAGAAATCAGAAATCTCGTTGAGCAGCATAAGTCT AACTAAAAGAAATCAGAAATCTCATTGAGCAGCATAAGTCT < 41bp 0.724140147512091 0.506861149444616 0.46476328 0.35270965 prediction 0.434557996134951 Functional Loss - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143793361 chr6:143793364 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_83860 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:143793358-143793374
64251 chr16 89629313 89629313 1 + C T UCEC 89629311 + 89629291 89629331 41 GGTCTATAAGAAGGAGAAAGCTCGAGTCATCACTGAGGAAG GGTCTATAAGAAGGAGAAAGCTTGAGTCATCACTGAGGAAG < 41bp 0.840827229693006 0.623548377656805 0.16605416 0.093413115 prediction 0.434557704072402 Functional Loss - RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629311 chr16:89629313 stopgain 0.654 0 23 hm5C_associated_SNPs_83861 0 0 72 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:89629280-89629320
64251 chr20 21346218 21346218 1 + G T PAAD 21346216 + 21346196 21346236 41 TTTTTAAATGGTCAGAAAGCCAGCAGCAGTACTGAAACCTA TTTTTAAATGGTCAGAAAGCCATCAGCAGTACTGAAACCTA < 41bp 0.717276493738432 0.384674230639783 0.35989055 0.08062068 prediction 0.434552987476864 Functional Loss - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21346216 chr20:21346218 nonsynonymous SNV 0.893 0 23 hm5C_associated_SNPs_83864 0 0 7 BUD13 POSTAR2 ENCODE chr20:21346211-21346226
64251 chr14 55817179 55817179 1 + G C LUSC 55817175 + 55817155 55817195 41 CGGAAGTCAGCAGGGAAACGCAGAGAACTCCTATGAACCAC CGGAAGTCAGCAGGGAAACGCAGACAACTCCTATGAACCAC < 41bp 0.7172754964236 0.422705479067158 0.8281472 0.13561636 prediction 0.4345509928472 Functional Loss - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55817175 chr14:55817179 nonsynonymous SNV 0.124 1 25 hm5C_associated_SNPs_83866 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:55817160-55817186
64251 chr13 100634891 100634891 1 + G A SKCM 100634888 + 100634868 100634908 41 CCCGGCGAGGTGTTCGGGCGCTCGGAGCAATACCGCCAGGT CCCGGCGAGGTGTTCGGGCGCTCAGAGCAATACCGCCAGGT < 41bp 0.804304519498974 0.587034763636069 0.8120438 0.5653434 prediction 0.434539511725811 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634888 chr13:100634891 synonymous SNV . 0 24 hm5C_associated_SNPs_83868 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:100634860-100634900
64251 chr9 140084339 140084339 1 + G A rs566918824 140084336 + 140084316 140084356 41 ACCAAGGCTACAGCCCCAGACCAGAAAAGTAGCGGCGGCAG ACCAAGGCTACAGCCCCAGACCAAAAAAGTAGCGGCGGCAG < 41bp 0.752363604548138 0.535097468096254 0.1581235 0.055034608 prediction 0.434532272903767 Functional Loss - SSNA1 ENSG00000176101 CDS Human protein_coding chr9:140084336 chr9:140084339 synonymous SNV . 0 24 hm5C_associated_SNPs_83872 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:140084338-140084339
64251 chr1 160318821 160318821 1 + G A GBM 160318818 + 160318798 160318838 41 GTGGAGACACAGGGGTTATCCACGTAGTAGAGAAAGAGGAG GTGGAGACACAGGGGTTATCCACATAGTAGAGAAAGAGGAG < 41bp 0.774360856982592 0.557098951921636 0.5385376 0.24003398 prediction 0.434523810121913 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160318818 chr1:160318821 nonsynonymous SNV 0.758 2 24 hm5C_associated_SNPs_83873 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:160318808-160318846
64251 chr12 56546356 56546356 1 + A C rs373486551 56546352 + 56546332 56546372 41 CGCGGCCACCGGAATTAACCCTTCAGGGCTGGGGGCCGCGC CGCGGCCACCGGAATTAACCCTTCCGGGCTGGGGGCCGCGC < 41bp 0.717260617539156 0.3463886669264 0.20587209 0.18609294 prediction 0.434521235078312 Functional Loss - MYL6B ENSG00000257809 ncRNA_intronic Human antisense chr12:56546352 chr12:56546356 . . 0 25 hm5C_associated_SNPs_83874 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr12:56546343-56546366
64251 chr21 40762689 40762689 1 + G A HNSC 40762686 + 40762666 40762706 41 ATGAGAGCGGAGATCCAGGACATGAAGCAGGAGCTCTCCAC ATGAGAGCGGAGATCCAGGACATAAAGCAGGAGCTCTCCAC < 41bp 0.763013997302569 0.545755310507703 0.07914871 0.04872459 prediction 0.434517373589731 Functional Loss - WRB;WRB-SH3BGR ENSG00000182093 CDS Human protein_coding chr21:40762686 chr21:40762689 nonsynonymous SNV 0.611 4 24 hm5C_associated_SNPs_83875 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:40762658-40762693
64251 chr3 127379476 127379476 1 + A C STAD 127379475 + 127379455 127379495 41 CCCAAGAAGAAGCCAAGCCTCAGGTCCGTGACTTTTCTCTC CCCAAGAAGAAGCCAAGCCTCCGGTCCGTGACTTTTCTCTC < 41bp 0.717258670084827 0.440174853494384 0.4445267 0.07092276 prediction 0.434517340169655 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379475 chr3:127379476 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_83876 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:127379459-127379478
64251 chr16 89987176 89987176 1 + G T UCEC 89987174 + 89987154 89987194 41 CCTGCCTCAGGCCAAGGGACCAGGTTTGCAGGAGCCCCCCT CCTGCCTCAGGCCAAGGGACCATGTTTGCAGGAGCCCCCCT < 41bp 0.878590947097857 0.661342878636153 0.73197263 0.04871121 prediction 0.434496136923408 Functional Loss - MC1R ENSG00000258839 CDS Human protein_coding chr16:89987174 chr16:89987176 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_83883 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89987148-89987177
64251 chr9 137293647 137293647 1 + G A COAD 137293644 + 137293624 137293664 41 AACGGCATGGGCCCGCCTTTCTCGGTCATCAGCTCCCCCAT AACGGCATGGGCCCGCCTTTCTCAGTCATCAGCTCCCCCAT < 41bp 0.773451919811945 0.556208556948689 0.23950124 0.04051557 prediction 0.434486725726512 Functional Loss - RXRA ENSG00000186350 CDS Human protein_coding chr9:137293644 chr9:137293647 synonymous SNV . 0 24 hm5C_associated_SNPs_83888 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:137293640-137293660
64251 chr2 24163408 24163408 1 + G T rs541161979 24163405 + 24163385 24163425 41 GCCGCGGAACCTGAGGCGGTCTGGGGCGGCGGCGCTCCGGC GCCGCGGAACCTGAGGCGGTCTGTGGCGGCGGCGCTCCGGC < 41bp 0.913429249512638 0.696186814246371 0.9102434 0.88930255 prediction 0.434484870532534 Functional Loss - UBXN2A ENSG00000173960 UTR5 Human protein_coding chr2:24163405 chr2:24163408 . . 0 24 hm5C_associated_SNPs_83889 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:24163400-24163420
64251 chr16 67902251 67902251 1 + G A BRCA 67902248 + 67902228 67902268 41 CTGTGCCTTTTTCAGATTGACGCGTCATGCCTTACGTGGGA CTGTGCCTTTTTCAGATTGACGCATCATGCCTTACGTGGGA < 41bp 0.717242402972198 0.473986542245927 0.33368826 0.2755191 prediction 0.434484805944397 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67902248 chr16:67902251 synonymous SNV . 0 24 hm5C_associated_SNPs_83890 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67902236-67902274
64251 chr16 67902250 67902250 1 + C T UCEC 67902248 + 67902228 67902268 41 CTGTGCCTTTTTCAGATTGACGCGTCATGCCTTACGTGGGA CTGTGCCTTTTTCAGATTGACGTGTCATGCCTTACGTGGGA < 41bp 0.717242402972198 0.442333726880458 0.33368826 0.52384776 prediction 0.434484805944397 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67902248 chr16:67902250 nonsynonymous SNV 0.872 1 23 hm5C_associated_SNPs_83891 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67902236-67902274
64251 chr12 98992432 98992432 1 + A T LUSC 98992428 + 98992408 98992448 41 CAAACCCAGCCAGGTTATGCCAACACTTTGAGGGATGCAGC CAAACCCAGCCAGGTTATGCCAACTCTTTGAGGGATGCAGC < 41bp 0.717237104039182 0.378740049357843 0.06481078 0.08216879 prediction 0.434474208078363 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98992428 chr12:98992432 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_83895 0 0 34 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:98992400-98992440
64251 chrX 119388057 119388057 1 + G A UCEC 119388054 + 119388034 119388074 41 AGGCAACTTTGAGCCAAACACAAGGAAGTGAAAAATTGTTG AGGCAACTTTGAGCCAAACACAAAGAAGTGAAAAATTGTTG < 41bp 0.756620261794671 0.53938605090627 0.60369456 0.28920823 prediction 0.434468421776801 Functional Loss - ZBTB33 ENSG00000177485 CDS Human protein_coding chrX:119388054 chrX:119388057 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_83896 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:119388036-119388084
64251 chr12 57882850 57882850 1 + T C UCEC 57882849 + 57882829 57882869 41 CTAAGGTCCCTGTCTTGCAGCTGGATAGCGGCAACTACCTC CTAAGGTCCCTGTCTTGCAGCCGGATAGCGGCAACTACCTC < 41bp 0.800622457616926 0.583391011124592 0.17354804 0.37419128 prediction 0.434462892984668 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57882849 chr12:57882850 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_83898 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:57882788-57882860
64251 chr2 54852008 54852008 1 + A C LUAD 54852007 + 54851987 54852027 41 TGCGGAATGAGCTCATAAGACAGGAGAAACTGGAACAGCTC TGCGGAATGAGCTCATAAGACCGGAGAAACTGGAACAGCTC < 41bp 0.803743066785048 0.586512990250054 0.6711737 0.3619442 prediction 0.434460153069988 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54852007 chr2:54852008 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_83899 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:54851953-54852018
64251 chr22 39428915 39428915 1 + C T rs112211063 39428913 + 39428893 39428933 41 TACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCT TACGGGCGTGAGCCACCCGGCTTGGCCGCACAACCAAATCT < 41bp 0.72808462787147 0.510855554097503 0.024835348 0.015543133 prediction 0.434458147547934 Functional Loss - APOBEC3D ENSG00000243811 UTR3 Human protein_coding chr22:39428913 chr22:39428915 . . 0 23 hm5C_associated_SNPs_83900 0 0 1 UPF1 POSTAR2 ENCODE chr22:39428882-39428925
64251 chr2 85868177 85868177 1 + A C COAD 85868176 + 85868156 85868196 41 CCATATCTAATCTTTTGTATCAAGAGATTCACTAAGAACAA CCATATCTAATCTTTTGTATCCAGAGATTCACTAAGAACAA < 41bp 0.808767813423771 0.591538798501914 0.92604744 0.6312058 prediction 0.434458029843716 Functional Loss - USP39 ENSG00000168883 CDS Human protein_coding chr2:85868176 chr2:85868177 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_83902 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:85868152-85868179
64251 chr19 829590 829590 1 + G A STAD 829587 + 829567 829607 41 CCGGGGTTAGCACCGTGGTGCTGGGTGCCTATGACCTGAGG CCGGGGTTAGCACCGTGGTGCTGAGTGCCTATGACCTGAGG < 41bp 0.80576079816936 0.588534456481146 0.87330353 0.45768976 prediction 0.434452683376429 Functional Loss - AZU1 ENSG00000172232 CDS Human protein_coding chr19:829587 chr19:829590 nonsynonymous SNV 0.854 4 24 hm5C_associated_SNPs_83904 0 0 1 DROSHA POSTAR2 ENCODE chr19:829560-829593
64251 chr6 41753998 41753998 1 + A C LUAD 41753997 + 41753977 41754017 41 GGGGGAAGCCCCTGCTGCCCCAGCTGCTTCGAGAACCGCTA GGGGGAAGCCCCTGCTGCCCCCGCTGCTTCGAGAACCGCTA < 41bp 0.71722377052045 0.454539684596988 0.3853143 0.14113015 prediction 0.434447541040901 Functional Loss - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41753997 chr6:41753998 nonsynonymous SNV 0.973 1 22 hm5C_associated_SNPs_83906 0 0 1 EIF3H POSTAR2 ENCODE chr6:41753932-41754060
64251 chr22 30416769 30416769 1 + G A UCEC 30416766 + 30416746 30416786 41 AGATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTTGAAG AGATTGAGTCAGGCCACCAGCAGAAAGTAGAAACTTTGAAG < 41bp 0.717222351014474 0.478712810943094 0.90072054 0.8996306 prediction 0.434444702028948 Functional Loss - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30416766 chr22:30416769 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_83909 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr22:30416745-30416790
64251 chr4 159092464 159092464 1 - G A BLCA 159092466 - 159092446 159092486 41 CATCTGCTCCCTGTGCGTCCCGCGGGTGCGTAAGCTCTGGA CATCTGCTCCCTGTGCGTCCCGTGGGTGCGTAAGCTCTGGA < 41bp 0.847652536202712 0.630438840501643 0.8916477 0.82471883 prediction 0.434427391402138 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092466 chr4:159092464 nonsynonymous SNV 0.014 0 23 hm5C_associated_SNPs_83913 0 0 3 DDX3X POSTAR2 ENCODE chr4:159092412-159092474
64251 chr17 43698040 43698040 1 + G C rs555506576 43698036 + 43698016 43698056 41 GTGGCCTGAGGGCCTGGCTGCCCGGGGGGCGGGCCGGGGCC GTGGCCTGAGGGCCTGGCTGCCCGCGGGGCGGGCCGGGGCC < 41bp 0.833042126935513 0.615834084004397 0.8306235 0.5512736 prediction 0.434416085862233 Functional Loss - LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43698036 chr17:43698040 . . 0 25 hm5C_associated_SNPs_83914 0 0 1 CSTF2T POSTAR2 ENCODE chr17:43698039-43698109
64251 chr2 86669185 86669185 1 + C T DLBC 86669183 + 86669163 86669203 41 TGGAAACCATGGTGCTCACGCTCGGAGAAAGTTGGCCGGTA TGGAAACCATGGTGCTCACGCTTGGAGAAAGTTGGCCGGTA < 41bp 0.836641475031887 0.619433911499651 0.42359248 0.46761385 prediction 0.434415127064473 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86669183 chr2:86669185 synonymous SNV . 0 23 hm5C_associated_SNPs_83915 0 0 4 DDX3X POSTAR2 ENCODE chr2:86669138-86669199
64251 chr18 73000170 73000170 1 + C T SKCM 73000167 + 73000147 73000187 41 ATCTCGAAGTTTACTGGGCTCTCCATGACCACCATCAGCCA ATCTCGAAGTTTACTGGGCTCTCTATGACCACCATCAGCCA < 41bp 0.7342306297121 0.517026306588036 0.94231176 0.79715014 prediction 0.434408646248126 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:73000167 chr18:73000170 synonymous SNV . 0 24 hm5C_associated_SNPs_83918 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:73000147-73000173
64251 chr7 29438008 29438008 1 + C T LUSC 29438006 + 29437986 29438026 41 CAGGTTTCATGGGATCATCTCTCGGGAGCAGGCGGATGAGC CAGGTTTCATGGGATCATCTCTTGGGAGCAGGCGGATGAGC < 41bp 0.717202712866289 0.480070102537961 0.24406669 0.217204 prediction 0.434405425732578 Functional Loss - CHN2 ENSG00000106069 CDS Human protein_coding chr7:29438006 chr7:29438008 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_83920 0 0 7 BUD13 POSTAR2 ENCODE chr7:29437938-29438072
64251 chr19 47424672 47424672 1 + G T UCEC 47424669 + 47424649 47424689 41 CTGAGGGGGAGGAGATTGCTCAAGAAATTGACGGAAGGTTC CTGAGGGGGAGGAGATTGCTCAATAAATTGACGGAAGGTTC < 41bp 0.717194860181409 0.328296084783738 0.2287699 0.08409783 prediction 0.434389720362818 Functional Loss - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47424669 chr19:47424672 stopgain 0.997 1 24 hm5C_associated_SNPs_83927 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:47424660-47424680
64251 chr21 45938517 45938517 1 + C T UCEC 45938515 + 45938495 45938535 41 GTGCCTTTCCATCCAGGGTGCGCGACTCTGCTCTCAAGACC GTGCCTTTCCATCCAGGGTGCGTGACTCTGCTCTCAAGACC < 41bp 0.796192691952115 0.579002839170204 0.22357154 0.34168643 prediction 0.434379705563823 Functional Loss - TSPEAR-AS2 ENSG00000182912 CDS Human antisense chr21:45938515 chr21:45938517 stopgain . 0 23 hm5C_associated_SNPs_83930 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45938499-45938527
64251 chr21 45745116 45745116 1 + G T LUSC 45745114 + 45745094 45745134 41 GAGGGCAAGGGCGTCTTCGACTGCAGGACCAATGTCCTGGG GAGGGCAAGGGCGTCTTCGACTTCAGGACCAATGTCCTGGG < 41bp 0.907682780172629 0.690493809920964 0.33071488 0.19216716 prediction 0.434377940503329 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45745114 chr21:45745116 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_83931 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45745092-45745121
64251 chr1 11898452 11898452 1 + G A COAD 11898449 + 11898429 11898469 41 CCGAGGACTACCCGCGGTACCCCGACATCCACGACCTGGAC CCGAGGACTACCCGCGGTACCCCAACATCCACGACCTGGAC < 41bp 0.717188757497967 0.474071714407337 0.39700583 0.3940857 prediction 0.434377514995934 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11898449 chr1:11898452 nonsynonymous SNV 0.764 2 24 hm5C_associated_SNPs_83932 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:11898445-11898466
64251 chr4 1347004 1347004 1 + G A rs76217876 1347001 + 1346981 1347021 41 CCGGTCTGGCACCCCTGACCCCCGGGACGGGGAGCAGCCCT CCGGTCTGGCACCCCTGACCCCCAGGACGGGGAGCAGCCCT < 41bp 0.805543148769065 0.588354784504426 0.13427442 0.008754343 prediction 0.434376728529277 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347001 chr4:1347004 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_83933 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:1346985-1347023
64251 chr9 97203357 97203357 1 + C T ESCA 97203355 + 97203335 97203375 41 TAGCTGATGTCACTCAGGAGCACGAGCGAAGTACAGCTTAT TAGCTGATGTCACTCAGGAGCATGAGCGAAGTACAGCTTAT < 41bp 0.717183020950163 0.427766093432896 0.23312613 0.2957747 prediction 0.434366041900327 Functional Loss - MFSD14B ENSG00000148110 CDS Human protein_coding chr9:97203355 chr9:97203357 synonymous SNV . 0 23 hm5C_associated_SNPs_83939 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:97203309-97203360
64251 chr5 131728257 131728257 1 + C T SKCM 131728255 + 131728235 131728275 41 AACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGG AACATGGGTGTGGGAGTCAGCTTCACAGCATCCCGCCTGGG < 41bp 0.717182450040221 0.421653885254006 0.85780764 0.26054367 prediction 0.434364900080441 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131728255 chr5:131728257 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_83941 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:131728255-131728308
64251 chr5 131728258 131728258 1 + C T SKCM 131728255 + 131728235 131728275 41 AACATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGG AACATGGGTGTGGGAGTCAGCTCTACAGCATCCCGCCTGGG < 41bp 0.717182450040221 0.493992755666858 0.85780764 0.87918854 prediction 0.434364900080441 Functional Loss - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131728255 chr5:131728258 synonymous SNV . 0 24 hm5C_associated_SNPs_83942 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:131728255-131728308
64251 chr10 26993670 26993670 1 + G A PRAD 26993667 + 26993647 26993687 41 TCCAAATGTATGTCGTATATCACGGTAAGTTTACAGTCCAT TCCAAATGTATGTCGTATATCACAGTAAGTTTACAGTCCAT < 41bp 0.760013510458071 0.542833134066828 0.5235439 0.21084028 prediction 0.434360752782486 Functional Loss - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26993667 chr10:26993670 nonsynonymous SNV 0.952 1 24 hm5C_associated_SNPs_83944 0 0 1 PRPF8 POSTAR2 ENCODE chr10:26993664-26993701
64251 chr8 19679998 19679998 1 + G T STAD 19679995 + 19679975 19680015 41 AGGCTGAAACTATTGAAGAACAAGAATCTCCAGTGAACTGC AGGCTGAAACTATTGAAGAACAATAATCTCCAGTGAACTGC < 41bp 0.717171588826167 0.390605911276499 0.07370749 0.043775827 prediction 0.434343177652334 Functional Loss - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19679995 chr8:19679998 stopgain 0.998 1 24 hm5C_associated_SNPs_83950 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:19679972-19680014
64251 chr1 150131509 150131509 1 + C T LUSC 150131507 + 150131487 150131527 41 GCGAAAGGCCAAGGACCCCCCTCGGTCTCCGCCGGATTCTG GCGAAAGGCCAAGGACCCCCCTTGGTCTCCGCCGGATTCTG < 41bp 0.844408057520504 0.627237579544189 0.085623205 0.043474674 prediction 0.43434095595263 Functional Loss - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131507 chr1:150131509 nonsynonymous SNV 0.413 0 23 hm5C_associated_SNPs_83951 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131464-150131517
64251 chr19 48257807 48257807 1 + G A rs192330726 48257804 + 48257784 48257824 41 ACCCTGCTCTCAGCGGCCCACGAGGTGGAGTTGCAGCGGCA ACCCTGCTCTCAGCGGCCCACGAAGTGGAGTTGCAGCGGCA < 41bp 0.809736454508651 0.592567768893543 0.9283242 0.77755594 prediction 0.434337371230217 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48257804 chr19:48257807 synonymous SNV . 0 24 hm5C_associated_SNPs_83954 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:48257660-48257817
64251 chr7 94180689 94180689 1 + G T SARC 94180686 + 94180666 94180706 41 TGCTGTTTGCTTTTATTTATCTGGCTTTGCAGAAGCGTCAA TGCTGTTTGCTTTTATTTATCTGTCTTTGCAGAAGCGTCAA < 41bp 0.71716385737184 0.331008754549567 0.081447095 0.03462574 prediction 0.434327714743679 Functional Loss - CASD1 ENSG00000127995 CDS Human protein_coding chr7:94180686 chr7:94180689 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_83957 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:94180670-94180700
64251 chr6 122737406 122737406 1 + G A UCEC 122737403 + 122737383 122737423 41 GGAAGGAGGTGTCAGAATTACGAGCAAAGCATGCACAACAG GGAAGGAGGTGTCAGAATTACGAACAAAGCATGCACAACAG < 41bp 0.777538210396976 0.56037530829814 0.53891784 0.17450118 prediction 0.434325804197674 Functional Loss - HSF2 ENSG00000025156 CDS Human protein_coding chr6:122737403 chr6:122737406 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_83958 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr6:122737363-122737407
64251 chr11 122774968 122774968 1 + C T LUSC 122774965 + 122774945 122774985 41 GGAGAAGTCGAGCAGCCTTTCTCCGTACGTGAAGAGCTCAA GGAGAAGTCGAGCAGCCTTTCTCTGTACGTGAAGAGCTCAA < 41bp 0.76759988647787 0.55043920030012 0.25724366 0.023367524 prediction 0.4343213723555 Functional Loss - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122774965 chr11:122774968 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_83959 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:122774960-122774980
64251 chr19 13084371 13084371 1 + G T UCEC 13084367 + 13084347 13084387 41 CCCGTGGTCCTGTGGTGTCTCACTGGCAGCTCAGCCTCCCG CCCGTGGTCCTGTGGTGTCTCACTTGCAGCTCAGCCTCCCG < 41bp 0.722889350522908 0.505733580474335 0.17521182 0.04327455 prediction 0.434311540097145 Functional Loss - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084367 chr19:13084371 nonsynonymous SNV 0.004 3 25 hm5C_associated_SNPs_83961 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:13084338-13084376
64251 chr18 9396379 9396379 1 + G T OV 9396377 + 9396357 9396397 41 TTCTCTCTTCCGGGCACTCACAGAAGGAGATACTCAGTTGA TTCTCTCTTCCGGGCACTCACATAAGGAGATACTCAGTTGA < 41bp 0.902439158396085 0.685284886147502 0.8923857 0.230923 prediction 0.434308544497166 Functional Loss - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9396377 chr18:9396379 stopgain 1.000 1 23 hm5C_associated_SNPs_83964 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:9396351-9396379
64251 chr14 97319464 97319464 1 + G A UCEC 97319461 + 97319441 97319481 41 GAGTATGTGCATGGAGATATCAAGGCCTCAAATCTTCTTCT GAGTATGTGCATGGAGATATCAAAGCCTCAAATCTTCTTCT < 41bp 0.78129095691495 0.564138431849605 0.9128159 0.88349724 prediction 0.434305050130691 Functional Loss - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97319461 chr14:97319464 synonymous SNV . 0 24 hm5C_associated_SNPs_83965 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:97319411-97319505
64251 chr11 67071065 67071065 1 + G A rs566914023 67071062 + 67071042 67071082 41 GGTTGAGGGAAGGGGCCGTGCCCGGTGCCAGCCCAGGTGCT GGTTGAGGGAAGGGGCCGTGCCCAGTGCCAGCCCAGGTGCT < 41bp 0.717146795598155 0.467296044535295 0.82150364 0.37877864 prediction 0.434293591196309 Functional Loss - SSH3 ENSG00000172830 UTR5 Human protein_coding chr11:67071062 chr11:67071065 . . 0 24 hm5C_associated_SNPs_83970 0 0 3 DDX3X POSTAR2 ENCODE chr11:67071055-67071104
64251 chr7 73929861 73929861 1 + T C SARC 73929860 + 73929840 73929880 41 GTAGCCTCCCTCGGTCCTCCCTGGAACATGGCTCAGATGTG GTAGCCTCCCTCGGTCCTCCCCGGAACATGGCTCAGATGTG < 41bp 0.819121775774531 0.601979306428943 0.6444825 0.69495875 prediction 0.434284938691175 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73929860 chr7:73929861 nonsynonymous SNV 0.782 2 22 hm5C_associated_SNPs_83972 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr7:73929860-73929880
64251 chr6 28264666 28264666 1 + G A OV 28264663 + 28264643 28264683 41 GTGGTCACATCTGAGTCTGACTCGGAGGAACCTCTGTGGGA GTGGTCACATCTGAGTCTGACTCAGAGGAACCTCTGTGGGA < 41bp 0.787918891250775 0.570776930282825 0.17169964 0.108545035 prediction 0.4342839219359 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28264663 chr6:28264666 nonsynonymous SNV 0.133 0 24 hm5C_associated_SNPs_83974 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:28264631-28264699
64251 chr14 77242550 77242550 1 + G A SKCM 77242547 + 77242527 77242567 41 TGGAAGCACTCGGTGCTGGACGTGGAGCGCCTGGGCCGCGA TGGAAGCACTCGGTGCTGGACGTAGAGCGCCTGGGCCGCGA < 41bp 0.717140739726074 0.473765812190099 0.322782 0.3152954 prediction 0.434281479452149 Functional Loss - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77242547 chr14:77242550 synonymous SNV . 0 24 hm5C_associated_SNPs_83975 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:77242532-77242567
64251 chr10 69672614 69672614 1 + G A UCEC 69672611 + 69672591 69672631 41 GTTGTATGGAAGAAAAACCACAGGAAGTACAAACTTCTAGG GTTGTATGGAAGAAAAACCACAGAAAGTACAAACTTCTAGG < 41bp 0.752276080994465 0.53513607949472 0.11454958 0.10914549 prediction 0.434280002999491 Functional Loss - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69672611 chr10:69672614 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_83976 0 0 2 EWSR1 POSTAR2 SRX029343 chr10:69672602-69672629
64251 chr8 9564372 9564372 1 + G A HNSC 9564369 + 9564349 9564389 41 TCTGGCAGTTTACTCCACTGCACGAGGCTGCTTCCAAGAAC TCTGGCAGTTTACTCCACTGCACAAGGCTGCTTCCAAGAAC < 41bp 0.782554674267366 0.565415772276145 0.19094151 0.08332518 prediction 0.434277803982442 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9564369 chr8:9564372 nonsynonymous SNV 0.975 3 24 hm5C_associated_SNPs_83979 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:9564352-9564385
64251 chr18 61558735 61558735 1 + G T LUSC 61558733 + 61558713 61558753 41 CCCTCAATTTATTCAAGCATCTGGCAAAAGCAAGCCCCACC CCCTCAATTTATTCAAGCATCTTGCAAAAGCAAGCCCCACC < 41bp 0.717133812070955 0.367225923693601 0.07454464 0.053455442 prediction 0.434267624141911 Functional Loss - SERPINB2 ENSG00000197632 CDS Human protein_coding chr18:61558733 chr18:61558735 synonymous SNV . 0 23 hm5C_associated_SNPs_83983 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr18:61558720-61558740
64251 chr12 125510001 125510001 1 + C T rs181788991 125509999 + 125509979 125510019 41 GTCAGCCGGCCGGGCGGGTCCACAGTTACCAGCACGCTGTC GTCAGCCGGCCGGGCGGGTCCATAGTTACCAGCACGCTGTC < 41bp 0.796343973690968 0.579214822446389 0.46129775 0.26169878 prediction 0.434258302489158 Functional Loss - THRIL ENSG00000184992 UTR3 Human protein_coding chr12:125509999 chr12:125510001 . . 0 23 hm5C_associated_SNPs_83989 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr12:125509975-125510003
64251 chr17 45017921 45017921 1 + G T LIHC 45017918 + 45017898 45017938 41 GGCAAGGCTGTCCTGTCCCCCAGGCACCCAAGGATCCTGCC GGCAAGGCTGTCCTGTCCCCCAGTCACCCAAGGATCCTGCC < 41bp 0.717126005367834 0.352744360861541 0.6133146 0.14142033 prediction 0.434252010735667 Functional Loss - GOSR2 ENSG00000108433 CDS Human protein_coding chr17:45017918 chr17:45017921 nonsynonymous SNV 0.003 4 24 hm5C_associated_SNPs_83992 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45017873-45017942
64251 chr7 134632353 134632353 1 + C T STAD 134632350 + 134632330 134632370 41 GGCTGGAGGAGCTTCGTCGTCGTCGCGGGGAGACCGAGAGC GGCTGGAGGAGCTTCGTCGTCGTTGCGGGGAGACCGAGAGC < 41bp 0.725325179846376 0.508200307762151 0.44341853 0.28098488 prediction 0.43424974416845 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134632350 chr7:134632353 nonsynonymous SNV 0.808 4 24 hm5C_associated_SNPs_83993 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:134632331-134632359
64251 chr19 48220020 48220020 1 + G A SKCM 48220017 + 48219997 48220037 41 GGGCCTTCCACTCGCCGGCCCTGGAGGACGCAGACTTCGAC GGGCCTTCCACTCGCCGGCCCTGAAGGACGCAGACTTCGAC < 41bp 0.804197516503116 0.587084741974115 0.7436694 0.23580253 prediction 0.434225549058002 Functional Loss - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48220017 chr19:48220020 nonsynonymous SNV 0.659 1 24 hm5C_associated_SNPs_84004 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:48220010-48220035
64251 chr16 2135263 2135263 1 + C T HNSC 2135261 + 2135241 2135281 41 TTGAGCGGTCGGTGCAGCTCCTCGACCAGATCCCATCATAC TTGAGCGGTCGGTGCAGCTCCTTGACCAGATCCCATCATAC < 41bp 0.717106920840853 0.434722854687662 0.24240643 0.20703647 prediction 0.434213841681706 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2135261 chr16:2135263 synonymous SNV . 0 23 hm5C_associated_SNPs_84008 1 0 1 DDX24 POSTAR2 ENCODE chr16:2135253-2135282
64251 chr11 70118312 70118312 1 + G T UCEC 70118308 + 70118288 70118328 41 GAGGTGATGCCGACCATCAGCGAAGCAGAAGGCCCCCCTGG GAGGTGATGCCGACCATCAGCGAATCAGAAGGCCCCCCTGG < 41bp 0.724075297640371 0.506977317414336 0.77922475 0.4731096 prediction 0.43419596045207 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70118308 chr11:70118312 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_84013 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:70118288-70118315
64251 chr5 140558908 140558908 1 + G A COAD 140558905 + 140558885 140558925 41 GTCACTGACTTAGGGACACCCAGGCTGACAACACATCTCAA GTCACTGACTTAGGGACACCCAGACTGACAACACATCTCAA < 41bp 0.717097641909971 0.488921145746569 0.685121 0.07236174 prediction 0.434195283819943 Functional Loss - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140558905 chr5:140558908 synonymous SNV . 0 24 hm5C_associated_SNPs_84014 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140558873-140558928
64251 chr5 140558907 140558907 1 + G T UCEC 140558905 + 140558885 140558925 41 GTCACTGACTTAGGGACACCCAGGCTGACAACACATCTCAA GTCACTGACTTAGGGACACCCATGCTGACAACACATCTCAA < 41bp 0.717097641909971 0.394082515784536 0.685121 0.03228751 prediction 0.434195283819943 Functional Loss - PCDHB8 ENSG00000120322 CDS Human protein_coding chr5:140558905 chr5:140558907 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_84015 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140558873-140558928
64251 chr3 37376628 37376628 1 + G A BLCA 37376625 + 37376605 37376645 41 AGAAGAAATACCAGCAAAAGCTAGAGCAGGAGGAGAACCCT AGAAGAAATACCAGCAAAAGCTAAAGCAGGAGGAGAACCCT < 41bp 0.717087848940826 0.495355700102201 0.42371708 0.52614534 prediction 0.434175697881652 Functional Loss - GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37376625 chr3:37376628 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_84018 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:37376541-37376648
64251 chrX 129053172 129053172 1 + G A ACC 129053169 + 129053149 129053189 41 AGGCAAGAACTCCCCTGGAGCAGGAAATTTTCAACCTCCTC AGGCAAGAACTCCCCTGGAGCAGAAAATTTTCAACCTCCTC < 41bp 0.772968907719681 0.555886061886212 0.4534274 0.19347012 prediction 0.434165691666939 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129053169 chrX:129053172 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_84020 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chrX:129053155-129053180
64251 chr19 58790589 58790589 1 + C T rs145995823 58790587 + 58790567 58790607 41 GCAGACTGACCCTTTCACCTCGCGGCGCGATGAGAGCGGCA GCAGACTGACCCTTTCACCTCGTGGCGCGATGAGAGCGGCA < 41bp 0.761205521154826 0.544123299785645 0.3349154 0.19907904 prediction 0.434164442738362 Functional Loss - ZNF8-ERVK3-1 ENSG00000267216 CDS Human protein_coding chr19:58790587 chr19:58790589 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_84022 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:58790573-58790782
64251 chrX 153678858 153678858 1 + C T rs782244383 153678856 + 153678836 153678876 41 TGTCACCGGGACTCCAGGCACCCGCTCCCCTGCGACCATGC TGTCACCGGGACTCCAGGCACCTGCTCCCCTGCGACCATGC < 41bp 0.733112057788589 0.516030255228872 0.0749225 0.1325554 prediction 0.434163605119434 Functional Loss - FAM50A ENSG00000071859 UTR3 Human protein_coding chrX:153678856 chrX:153678858 . . 0 23 hm5C_associated_SNPs_84024 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678782-153678971
64251 chr19 1254309 1254309 1 + T C STAD 1254308 + 1254288 1254328 41 GGCCGCTGCGGCCGCCGCCGCTGCTGCGCGGGGGGACCCCA GGCCGCTGCGGCCGCCGCCGCCGCTGCGCGGGGGGACCCCA < 41bp 0.717073795818912 0.479084247075348 0.3387436 0.3698603 prediction 0.434147591637824 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254308 chr19:1254309 synonymous SNV . 0 22 hm5C_associated_SNPs_84026 0 0 2 FXR2 POSTAR2 ENCODE chr19:1254290-1254316
64251 chr11 47311587 47311587 1 + G T HNSC 47311584 + 47311564 47311604 41 AGTCAGAGGACGATGCCCGGCAGGACATCATCCCGGATGTG AGTCAGAGGACGATGCCCGGCAGTACATCATCCCGGATGTG < 41bp 0.717071598108111 0.326754055666748 0.42024267 0.26210386 prediction 0.434143196216223 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47311584 chr11:47311587 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_84027 0 0 4 DDX24 POSTAR2 ENCODE chr11:47311581-47311596
64251 chr1 165797073 165797073 1 + G T LUSC 165797070 + 165797050 165797090 41 GGAGGAGGGGCGGCGCGAACCATGGCCGGGGACAGCGAGCA GGAGGAGGGGCGGCGCGAACCATTGCCGGGGACAGCGAGCA < 41bp 0.810961662630356 0.593891904595609 0.34606606 0.15796131 prediction 0.434139516069495 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165797070 chr1:165797073 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_84031 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:165797060-165797081
64251 chr11 57460100 57460100 1 + G A SKCM 57460097 + 57460077 57460117 41 CTCTAGGTTACGGGTAAATTCCGGGGAGGTGTGAACCCCTT CTCTAGGTTACGGGTAAATTCCGAGGAGGTGTGAACCCCTT < 41bp 0.795634480331327 0.578565460293538 0.9112518 0.77890015 prediction 0.434138040075579 Functional Loss - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57460097 chr11:57460100 synonymous SNV . 0 24 hm5C_associated_SNPs_84033 0 0 4 BUD13 POSTAR2 ENCODE chr11:57460068-57460127
64251 chr14 24909989 24909989 1 - C A STAD 24909991 - 24909971 24910011 41 ACGCCAGGTGGTGGTGCGCTCAGGTGAGAAACGGGCCTGGG ACGCCAGGTGGTGGTGCGCTCATGTGAGAAACGGGCCTGGG < 41bp 0.915750430793362 0.698688960796223 0.9104174 0.42870158 prediction 0.434122939994277 Functional Loss - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909991 chr14:24909989 nonsynonymous SNV 0.337 4 23 hm5C_associated_SNPs_84036 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909980-24910000
64251 chr7 149535783 149535783 1 + C T rs545963433 149535781 + 149535761 149535801 41 CCGAGGATCCCCGAGCCGGGCTCGGGCGAGGCGGGGCGGCT CCGAGGATCCCCGAGCCGGGCTTGGGCGAGGCGGGGCGGCT < 41bp 0.741377815769955 0.524318242482663 0.7924293 0.8277683 prediction 0.434119146574584 Functional Loss - ZNF862 ENSG00000106479 intronic Human protein_coding chr7:149535781 chr7:149535783 . . 0 23 hm5C_associated_SNPs_84038 0 0 2 SF3B1 POSTAR2 ENCODE chr7:149535756-149535799
64251 chr8 79510766 79510766 1 + G A DLBC 79510763 + 79510743 79510783 41 TTAGCAGGTCTTGATATCAACAAGACAGGTAAGTCATCTGG TTAGCAGGTCTTGATATCAACAAAACAGGTAAGTCATCTGG < 41bp 0.717059086734369 0.483565866386966 0.22898886 0.16308221 prediction 0.434118173468737 Functional Loss - PKIA ENSG00000171033 CDS Human protein_coding chr8:79510763 chr8:79510766 synonymous SNV . 0 24 hm5C_associated_SNPs_84039 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:79510739-79510770
64251 chr20 3870171 3870171 1 + A C rs561872310 3870167 + 3870147 3870187 41 GAGCGCCACGGCAGGGCTTCCGCCACCTCCGTCTCGTCGGC GAGCGCCACGGCAGGGCTTCCGCCCCCTCCGTCTCGTCGGC < 41bp 0.930895759776705 0.713837984994738 0.31368664 0.16681594 prediction 0.434115549563934 Functional Loss - PANK2 ENSG00000125779 CDS Human protein_coding chr20:3870167 chr20:3870171 nonsynonymous SNV 0.161 1 25 hm5C_associated_SNPs_84040 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:3870160-3870180
64251 chr1 44137290 44137290 1 + C T rs138721228 44137287 + 44137267 44137307 41 CTTGGATCTTTCTGTGAATCCTGCGTCTGTAGGGGGACGCC CTTGGATCTTTCTGTGAATCCTGTGTCTGTAGGGGGACGCC < 41bp 0.751272947509664 0.534216770922027 0.12750444 0.1452674 prediction 0.434112353175274 Functional Loss - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44137287 chr1:44137290 nonsynonymous SNV 0.235 0 24 hm5C_associated_SNPs_84043 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221667 chr1:44137280-44137300
64251 chr11 64973991 64973991 1 + C T UCEC 64973989 + 64973969 64974009 41 CTTCTTCCTGGCCAATGCGTCTCGGGCGCGCTCAGAGCAGT CTTCTTCCTGGCCAATGCGTCTTGGGCGCGCTCAGAGCAGT < 41bp 0.717055011168995 0.43638723057526 0.3696218 0.24821255 prediction 0.434110022337991 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64973989 chr11:64973991 nonsynonymous SNV 0.186 2 23 hm5C_associated_SNPs_84044 0 0 2 FMR1 POSTAR2 ENCODE chr11:64973980-64974103
64251 chr1 116534747 116534747 1 + C T UCEC 116534745 + 116534725 116534765 41 AGCTCCTGCCAAATCAGAGCCACGGTAACCAGTCAGCTGGT AGCTCCTGCCAAATCAGAGCCATGGTAACCAGTCAGCTGGT < 41bp 0.717053788436828 0.433642661231476 0.4988801 0.4890848 prediction 0.434107576873655 Functional Loss - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116534745 chr1:116534747 synonymous SNV . 0 23 hm5C_associated_SNPs_84047 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:116534735-116534756
64251 chr12 54338804 54338804 1 + G A HNSC 54338801 + 54338781 54338821 41 CAGACGTGGTTCCCCTGCAGCCCGAGGTGAGCAGCTACCGG CAGACGTGGTTCCCCTGCAGCCCAAGGTGAGCAGCTACCGG < 41bp 0.717051912398051 0.475013826939922 0.37237912 0.17149982 prediction 0.434103824796103 Functional Loss - HOXC13 ENSG00000123364 CDS Human protein_coding chr12:54338801 chr12:54338804 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_84048 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:54338804-54338805
64251 chr8 22477530 22477530 1 + A C rs201917097 22477529 + 22477509 22477549 41 TCTTCCAGTTTAGAATAAGACAGGGGAGAAAAAGGCTTTTC TCTTCCAGTTTAGAATAAGACCGGGGAGAAAAAGGCTTTTC < 41bp 0.831054049959256 0.614003157705066 0.8560927 0.14831632 prediction 0.434101784508381 Functional Loss - CCAR2 ENSG00000158941 UTR3 Human protein_coding chr8:22477529 chr8:22477530 . . 0 22 hm5C_associated_SNPs_84049 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:22477514-22477605
64251 chr1 91989636 91989636 1 + G T STAD 91989633 + 91989613 91989653 41 GTAGCAAAGAAGTTCCAGCACAAGACTTGAGAAAACTCTGT GTAGCAAAGAAGTTCCAGCACAATACTTGAGAAAACTCTGT < 41bp 0.71704911193082 0.342332458096357 0.11015868 0.094691485 prediction 0.43409822386164 Functional Loss - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91989633 chr1:91989636 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_84050 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:91989606-91989694
64251 chr1 112240096 112240096 1 + G A SKCM 112240093 + 112240073 112240113 41 TCGATTGCCAACAGTGTATGCTCGAAATCCTGGATACTGCA TCGATTGCCAACAGTGTATGCTCAAAATCCTGGATACTGCA < 41bp 0.748483394257556 0.531436699098818 0.26227176 0.26996195 prediction 0.434093390317477 Functional Loss - RAP1A ENSG00000116473 CDS Human protein_coding chr1:112240093 chr1:112240096 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_84051 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:112240067-112240107
64251 chr2 28352238 28352238 1 + G A GBM 28352235 + 28352215 28352255 41 CCCCAAGCTGTACTTGTCACCTCGAATTGAGCAGTAAGTGT CCCCAAGCTGTACTTGTCACCTCAAATTGAGCAGTAAGTGT < 41bp 0.724817672692247 0.507771461935328 0.9275971 0.2694475 prediction 0.434092421513837 Functional Loss - BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28352235 chr2:28352238 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_84052 0 0 1 GRWD1 POSTAR2 ENCODE chr2:28352180-28352254
64251 chr3 44905743 44905743 1 + C T ESCA 44905741 + 44905721 44905761 41 TGTGATGGCGAGCACCAATTCTCTGATGTGGACCTTCTTTA TGTGATGGCGAGCACCAATTCTTTGATGTGGACCTTCTTTA < 41bp 0.717038621178915 0.425919664685593 0.8000673 0.7407793 prediction 0.434077242357829 Functional Loss - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44905741 chr3:44905743 synonymous SNV . 0 23 hm5C_associated_SNPs_84056 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:44905711-44905753
64251 chr20 3783817 3783817 1 + C T UCEC 3783814 + 3783794 3783834 41 GATAAGTTTGTGATTGTAGACTGCAGATACCCCTATGAATA GATAAGTTTGTGATTGTAGACTGTAGATACCCCTATGAATA < 41bp 0.744310394402792 0.527279043528143 0.056648225 0.015938282 prediction 0.434062701749298 Functional Loss - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3783814 chr20:3783817 synonymous SNV . 0 24 hm5C_associated_SNPs_84061 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:3783767-3783824
64251 chr6 138202346 138202346 1 + G A HNSC 138202343 + 138202323 138202363 41 CCCACCGGGGTGAGCCTGCCCCCGAAGACCCCCCCAAGCAG CCCACCGGGGTGAGCCTGCCCCCAAAGACCCCCCCAAGCAG < 41bp 0.805105608850251 0.588076758328625 0.124676704 0.06493142 prediction 0.434057701043252 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138202343 chr6:138202346 nonsynonymous SNV 0.151 0 24 hm5C_associated_SNPs_84062 0 0 1 RBM15 POSTAR2 ENCODE chr6:138202337-138202381
64251 chr19 5152302 5152302 1 + G A rs145664444 5152299 + 5152279 5152319 41 GTGCACCTGGCCAGGGGAAGCCCGGGGGTCTGGGGCCTCCC GTGCACCTGGCCAGGGGAAGCCCAGGGGTCTGGGGCCTCCC < 41bp 0.789237476967856 0.572209784542312 0.92197955 0.8659419 prediction 0.434055384851088 Functional Loss - KDM4B ENSG00000127663 UTR3 Human protein_coding chr19:5152299 chr19:5152302 . . 0 24 hm5C_associated_SNPs_84065 0 0 6 FAM120A POSTAR2 ENCODE chr19:5152293-5152311
64251 chr20 47592610 47592610 1 + G A BLCA 47592607 + 47592587 47592627 41 TGGGAAAGGCCTTGACATGGCAAGACGGTGTAGTGTGACGT TGGGAAAGGCCTTGACATGGCAAAACGGTGTAGTGTGACGT < 41bp 0.717021726783783 0.475792452154488 0.20605642 0.14056936 prediction 0.434043453567566 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47592607 chr20:47592610 nonsynonymous SNV 0.942 0 24 hm5C_associated_SNPs_84068 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:47592600-47592620
64251 chr22 45583606 45583606 1 + G T rs1058033 45583603 + 45583583 45583623 41 GATGACAGGGAGGTCTTTTCCAAGCAGGCACTCAGAACACA GATGACAGGGAGGTCTTTTCCAATCAGGCACTCAGAACACA < 41bp 0.717021016627418 0.400809913117966 0.43610033 0.13814759 prediction 0.434042033254836 Functional Loss - LOC105373064 ENSG00000093000 UTR3 Human protein_coding chr22:45583603 chr22:45583606 . . 0 24 hm5C_associated_SNPs_84070 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:45583573-45583615
64251 chr11 63988045 63988045 1 + G A rs3802932 63988042 + 63988022 63988062 41 CAGCGCACGGGCAGTGGGGGCCCGGGCAACCACCCCCACGG CAGCGCACGGGCAGTGGGGGCCCAGGCAACCACCCCCACGG < 41bp 0.810859519520534 0.593850546118249 0.8900932 0.8207978 prediction 0.434017946804571 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63988042 chr11:63988045 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_84076 0 1 1 RPS11 POSTAR2 ENCODE chr11:63988013-63988048
64251 chr7 50367306 50367306 1 + C T STAD 50367304 + 50367284 50367324 41 ATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACA ATGCCGATCCCCGAGGACCTCTTCACCACCTCGGGAGGACA < 41bp 0.839427799292034 0.622423652418466 0.93716073 0.1699892 prediction 0.434008293747138 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50367304 chr7:50367306 nonsynonymous SNV 0.845 4 23 hm5C_associated_SNPs_84078 0 0 1 DDX24 POSTAR2 ENCODE chr7:50367281-50367340
64251 chr13 40362559 40362559 1 + C T rs369715688 40362557 + 40362537 40362577 41 CCAGTTGTGGGAGGTGATGTCTCGGAAAACTCTGCCTTGGG CCAGTTGTGGGAGGTGATGTCTTGGAAAACTCTGCCTTGGG < 41bp 0.782096919052734 0.565094016215566 0.35202312 0.17941445 prediction 0.434005805674337 Functional Loss - COG6 ENSG00000133103 UTR3 Human protein_coding chr13:40362557 chr13:40362559 . . 0 23 hm5C_associated_SNPs_84080 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:40362555-40362582
64251 chr11 75280261 75280261 1 + G A rs528442568 75280258 + 75280238 75280278 41 GGGCCTGCAGGCCTTGGAGCCAGGGGGAGGTGCTTGGGGGA GGGCCTGCAGGCCTTGGAGCCAGAGGGAGGTGCTTGGGGGA < 41bp 0.781782487586975 0.56478061230833 0.937389 0.93550396 prediction 0.434003750557289 Functional Loss - SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75280258 chr11:75280261 . . 0 24 hm5C_associated_SNPs_84082 0 0 3 BUD13 POSTAR2 ENCODE chr11:75280225-75280270
64251 chr12 4722727 4722727 1 + G A rs143171709 4722724 + 4722704 4722744 41 GAGAAAACAAAAGATAGCCCCACGAAGCATGTTCAGCATTC GAGAAAACAAAAGATAGCCCCACAAAGCATGTTCAGCATTC < 41bp 0.768467998214499 0.551470452228193 0.08354518 0.056723893 prediction 0.433995091972613 Functional Loss - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4722724 chr12:4722727 synonymous SNV . 0 24 hm5C_associated_SNPs_84085 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:4722712-4722760
64251 chr14 70442476 70442476 1 + G T LUAD 70442473 + 70442453 70442493 41 GGGTACTGCTGGTGTGTCACCCCGGATGGGAAGCCCATCAG GGGTACTGCTGGTGTGTCACCCCTGATGGGAAGCCCATCAG < 41bp 0.716997533878061 0.308848993072675 0.29778972 0.18058863 prediction 0.433995067756122 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70442473 chr14:70442476 synonymous SNV . 0 24 hm5C_associated_SNPs_84086 0 0 3 RPS3 POSTAR2 ENCODE chr14:70442471-70442515
64251 chr20 48553058 48553058 1 + G C CESC 48553057 + 48553037 48553077 41 CCCGTGTGCTTAGAGGTGTACGAGAAGCCGGTACAGGTGCC CCCGTGTGCTTAGAGGTGTACCAGAAGCCGGTACAGGTGCC < 41bp 0.844228678692569 0.627238414012854 0.663264 0.3823557 prediction 0.433980529359429 Functional Loss - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48553057 chr20:48553058 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_84089 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:48553011-48553070
64251 chr6 44201185 44201185 1 + G T COAD 44201183 + 44201163 44201203 41 GCCAGCTGAGGCAGAGACCGCAGGAGCCATCATGGCCTTCT GCCAGCTGAGGCAGAGACCGCATGAGCCATCATGGCCTTCT < 41bp 0.899749554801391 0.68276888461523 0.8670145 0.15733564 prediction 0.433961340372323 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44201183 chr6:44201185 stopgain 0.974 1 23 hm5C_associated_SNPs_84095 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:44201172-44201222
64251 chr12 3129840 3129840 1 + G T LUAD 3129836 + 3129816 3129856 41 AGGGCCCGCCCCATCGCCCTCTGCGCCCCCGGCACCCCCAT AGGGCCCGCCCCATCGCCCTCTGCTCCCCCGGCACCCCCAT < 41bp 0.738046372900711 0.521068214355722 0.1997622 0.24736124 prediction 0.433956317089976 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3129836 chr12:3129840 synonymous SNV . 0 25 hm5C_associated_SNPs_84096 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:3129836-3129876
64251 chr2 46986887 46986887 1 + G A LUSC 46986884 + 46986864 46986904 41 CCTGAAGGCACGTTTTTGCTCAGGGACTCTGCGCAAGAGGA CCTGAAGGCACGTTTTTGCTCAGAGACTCTGCGCAAGAGGA < 41bp 0.792494691836655 0.575519322899091 0.9378287 0.8984947 prediction 0.433950737875129 Functional Loss - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46986884 chr2:46986887 synonymous SNV . 0 24 hm5C_associated_SNPs_84098 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr2:46986867-46986888
64251 chr11 65824803 65824803 1 + G A ESCA 65824800 + 65824780 65824820 41 GCCCATGGGAGCCCCTGTTCCCCGGCCTCGTGGTCCCCCAC GCCCATGGGAGCCCCTGTTCCCCAGCCTCGTGGTCCCCCAC < 41bp 0.812149677187801 0.595176386297602 0.22045347 0.07699141 prediction 0.433946581780398 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824800 chr11:65824803 nonsynonymous SNV 0.876 1 24 hm5C_associated_SNPs_84099 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65824796-65824822
64251 chr3 119533921 119533921 1 + G A UCEC 119533918 + 119533898 119533938 41 CACAGTGTTCAATGCGGAGACTGGAACCTGGGAGTGTGGCC CACAGTGTTCAATGCGGAGACTGAAACCTGGGAGTGTGGCC < 41bp 0.792187463346415 0.575215406348679 0.60693085 0.52090263 prediction 0.433944113995473 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119533918 chr3:119533921 nonsynonymous SNV 0.781 3 24 hm5C_associated_SNPs_84100 0 0 3 BUD13 POSTAR2 ENCODE chr3:119533907-119533964
64251 chr10 70856853 70856853 1 + G C rs77483718 70856849 + 70856829 70856869 41 TCCTCGGGCAGGTTATCCTACGCGGAGAGCCAGGTACCAAT TCCTCGGGCAGGTTATCCTACGCGCAGAGCCAGGTACCAAT < 41bp 0.858983238935587 0.642012506875287 0.6023443 0.19512936 prediction 0.433941464120601 Functional Loss - SRGN ENSG00000122862 CDS Human protein_coding chr10:70856849 chr10:70856853 synonymous SNV . 0 25 hm5C_associated_SNPs_84101 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:70856840-70856860
64251 chr19 56196954 56196954 1 + C T UCEC 56196951 + 56196931 56196971 41 TGCTGCGCGACGAGGACCGGCTGCGGGAAGAGCGGGCGCAC TGCTGCGCGACGAGGACCGGCTGTGGGAAGAGCGGGCGCAC < 41bp 0.716960371934058 0.495005870923608 0.7849189 0.43914187 prediction 0.433920743868117 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56196951 chr19:56196954 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_84105 0 0 3 BUD13 POSTAR2 ENCODE chr19:56196942-56197040
64251 chr4 37848660 37848660 1 + G A rs146573335 37848657 + 37848637 37848677 41 GATCGCAGTGCTCTCAAAGACACGTACATGTTGTCCAGCAC GATCGCAGTGCTCTCAAAGACACATACATGTTGTCCAGCAC < 41bp 0.771735593740057 0.55477721039431 0.1203374 0.02181822 prediction 0.433916766691494 Functional Loss - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37848657 chr4:37848660 synonymous SNV . 0 24 hm5C_associated_SNPs_84107 0 0 1 ZNF622 POSTAR2 ENCODE chr4:37848570-37848667
64251 chr19 1080312 1080312 1 + G A COAD 1080309 + 1080289 1080329 41 ACGTGAGTGATGTGGCGCGGCCGGAGGCTGCCGGGAGCCCC ACGTGAGTGATGTGGCGCGGCCGAAGGCTGCCGGGAGCCCC < 41bp 0.804048859751043 0.587091225496226 0.7182499 0.44131243 prediction 0.433915268509633 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1080309 chr19:1080312 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_84111 0 0 2 DDX24 POSTAR2 ENCODE chr19:1080278-1080378
64251 chr1 14149767 14149767 1 + C T rs76249840 14149765 + 14149745 14149785 41 AGAGAAAGGGAGTGCATGTGCGCGCGTGCATGTGTGCGTGC AGAGAAAGGGAGTGCATGTGCGTGCGTGCATGTGTGCGTGC < 41bp 0.752853688996682 0.535899204156412 0.32901186 0.26877528 prediction 0.43390896968054 Functional Loss - PRDM2 ENSG00000116731 UTR3 Human protein_coding chr1:14149765 chr1:14149767 . . 0 23 hm5C_associated_SNPs_84113 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:14149718-14149826
64251 chr18 67992860 67992860 1 + A C PAAD 67992856 + 67992836 67992876 41 CACCATTGCTACCTCCAATGCAGAATAATCAAATCCAAAGG CACCATTGCTACCTCCAATGCAGACTAATCAAATCCAAAGG < 41bp 0.716953248043229 0.309558353571551 0.0639396 0.061565846 prediction 0.433906496086457 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992856 chr18:67992860 nonsynonymous SNV 0.966 0 25 hm5C_associated_SNPs_84114 0 0 1 RBM22 POSTAR2 ENCODE chr18:67992772-67992871
64251 chrX 102842017 102842017 1 + C T HNSC 102842015 + 102841995 102842035 41 ATAAGGGGCTGGCTCATTACCTCAAGGAGTATAAAGAGGCC ATAAGGGGCTGGCTCATTACCTTAAGGAGTATAAAGAGGCC < 41bp 0.862481230926528 0.645529648948198 0.5136759 0.49829367 prediction 0.433903163956661 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102842015 chrX:102842017 synonymous SNV . 0 23 hm5C_associated_SNPs_84115 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102841984-102842021
64251 chr2 113288641 113288641 1 + C T rs529952058 113288639 + 113288619 113288659 41 TAATCATAGCACACTGCAGCCTCGAATTTCTGGGCTTGAGC TAATCATAGCACACTGCAGCCTTGAATTTCTGGGCTTGAGC < 41bp 0.71693977290171 0.48523245986502 0.92037725 0.2949981 prediction 0.43387954580342 Functional Loss - TTL ENSG00000114999 UTR3 Human protein_coding chr2:113288639 chr2:113288641 . . 0 23 hm5C_associated_SNPs_84118 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:113288627-113288659
64251 chr2 113288642 113288642 1 + G A rs188689379 113288639 + 113288619 113288659 41 TAATCATAGCACACTGCAGCCTCGAATTTCTGGGCTTGAGC TAATCATAGCACACTGCAGCCTCAAATTTCTGGGCTTGAGC < 41bp 0.71693977290171 0.491978037873833 0.92037725 0.50595367 prediction 0.43387954580342 Functional Loss - TTL ENSG00000114999 UTR3 Human protein_coding chr2:113288639 chr2:113288642 . . 0 24 hm5C_associated_SNPs_84119 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:113288627-113288659
64251 chr7 100804140 100804140 1 + C T rs1048303 100804138 + 100804118 100804158 41 CCTTTGCAGAACTGATGTCACCCCAGATGTCCTTCCCTCCC CCTTTGCAGAACTGATGTCACCTCAGATGTCCTTCCCTCCC < 41bp 0.716938913388682 0.467950369924807 0.08434227 0.05862686 prediction 0.433877826777363 Functional Loss - AP1S1 ENSG00000106367 UTR3 Human protein_coding chr7:100804138 chr7:100804140 . . 0 23 hm5C_associated_SNPs_84120 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100803888-100804143
64251 chr7 23240138 23240138 1 + G A rs61756129 23240135 + 23240115 23240155 41 TGTGGCTGGTTTTGGTAGTCCGGGCTCACATTCTCACACTG TGTGGCTGGTTTTGGTAGTCCGGACTCACATTCTCACACTG < 41bp 0.814739182439654 0.597800818491864 0.79872346 0.42899862 prediction 0.43387672789558 Functional Loss - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23240135 chr7:23240138 nonsynonymous SNV 0.512 2 24 hm5C_associated_SNPs_84121 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:23240120-23240140
64251 chr16 14755881 14755881 1 + C T CESC 14755878 + 14755858 14755898 41 TCATCCACACCATCTGCCCTCTGCAAGAAGACAGCTCTGGG TCATCCACACCATCTGCCCTCTGTAAGAAGACAGCTCTGGG < 41bp 0.78198536985767 0.565047184166308 0.17491084 0.03337899 prediction 0.433876371382724 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755878 chr16:14755881 stopgain 0.981 0 24 hm5C_associated_SNPs_84122 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:14755857-14755881
64251 chr22 30812280 30812280 1 + G A SKCM 30812277 + 30812257 30812297 41 TTTGGGATTTTCCTGAAGACCAAGATGGGAGAGAGGCAGCG TTTGGGATTTTCCTGAAGACCAAAATGGGAGAGAGGCAGCG < 41bp 0.78317883975247 0.56624669124473 0.21243185 0.19129837 prediction 0.433864297015479 Functional Loss - SEC14L2 ENSG00000100003;ENSG00000249590 CDS Human other chr22:30812277 chr22:30812280 synonymous SNV . 0 24 hm5C_associated_SNPs_84124 0 0 1 PPIG POSTAR2 ENCODE chr22:30812272-30812369
64251 chr17 18831966 18831966 1 + A C rs572036128 18831965 + 18831945 18831985 41 ACTGGAGGGCTGCCATGGGGCACGGTGATGGGGACATGGGG ACTGGAGGGCTGCCATGGGGCCCGGTGATGGGGACATGGGG < 41bp 0.716929324074469 0.47508121916106 0.12960726 0.08906478 prediction 0.433858648148938 Functional Loss - PRPSAP2 ENSG00000141127 intronic Human protein_coding chr17:18831965 chr17:18831966 . . 0 22 hm5C_associated_SNPs_84126 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18831944-18831969
64251 chr17 18831968 18831968 1 + G A rs183808822 18831965 + 18831945 18831985 41 ACTGGAGGGCTGCCATGGGGCACGGTGATGGGGACATGGGG ACTGGAGGGCTGCCATGGGGCACAGTGATGGGGACATGGGG < 41bp 0.716929324074469 0.482635839806133 0.12960726 0.12528282 prediction 0.433858648148938 Functional Loss - PRPSAP2 ENSG00000141127 intronic Human protein_coding chr17:18831965 chr17:18831968 . . 0 24 hm5C_associated_SNPs_84127 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18831944-18831969
64251 chr19 3532060 3532060 1 + C T rs61731108 3532058 + 3532038 3532078 41 GGCTCAAGTGGTCCACAGACCACCAGCTCCTCGCCTCGGGG GGCTCAAGTGGTCCACAGACCATCAGCTCCTCGCCTCGGGG < 41bp 0.716925401273785 0.446224577864873 0.17375249 0.099739045 prediction 0.43385080254757 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3532058 chr19:3532060 synonymous SNV . 0 23 hm5C_associated_SNPs_84128 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3532055-3532070
64251 chr8 21777226 21777226 1 + G T rs543608753 21777224 + 21777204 21777244 41 GGCGGCGGCGGCAGCGGCTCCGGCCGAGGTGCGCGCTGGGG GGCGGCGGCGGCAGCGGCTCCGTCCGAGGTGCGCGCTGGGG < 41bp 0.882558931814857 0.665638116996263 0.8373188 0.4103993 prediction 0.433841629637188 Functional Loss - XPO7 ENSG00000130227 UTR5 Human protein_coding chr8:21777224 chr8:21777226 . . 0 23 hm5C_associated_SNPs_84132 0 0 1 GEMIN5 POSTAR2 ENCODE chr8:21777200-21777307
64251 chr22 38201714 38201714 1 + A C UCEC 38201713 + 38201693 38201733 41 CAGTCCATTCAGAAGTATATCAAGAGCCACTACAAGGTGGG CAGTCCATTCAGAAGTATATCCAGAGCCACTACAAGGTGGG < 41bp 0.716917702400565 0.487338678933425 0.63741595 0.8814417 prediction 0.433835404801129 Functional Loss - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201713 chr22:38201714 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_84138 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:38201700-38201740
64251 chr20 18576812 18576812 1 + G A UCEC 18576809 + 18576789 18576829 41 GATTTCCACCTAGCAATGCCCACGGAGCAGGCAGAGGGCTT GATTTCCACCTAGCAATGCCCACAGAGCAGGCAGAGGGCTT < 41bp 0.786193478248296 0.569276912226525 0.113141805 0.02416107 prediction 0.433833132043543 Functional Loss - DTD1 ENSG00000125821 CDS Human protein_coding chr20:18576809 chr20:18576812 synonymous SNV . 0 24 hm5C_associated_SNPs_84139 0 0 2 UCHL5 POSTAR2 ENCODE chr20:18576649-18576824
64251 chr1 27121450 27121450 1 + G T UCEC 27121447 + 27121427 27121467 41 CACTAATATACAGCTATATCCAGGATGTCTACTGGAATGTT CACTAATATACAGCTATATCCAGTATGTCTACTGGAATGTT < 41bp 0.716906345037441 0.323228792694068 0.7928264 0.16036156 prediction 0.433812690074883 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27121447 chr1:27121450 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_84145 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:27121450-27121476
64251 chr16 31123463 31123463 1 + G A UCEC 31123460 + 31123440 31123480 41 AGCTTTGGCTTCGGGTTGCCCACGTCACGGGCCTACGCGGA AGCTTTGGCTTCGGGTTGCCCACATCACGGGCCTACGCGGA < 41bp 0.804509325296282 0.587605412447298 0.077445865 0.030622065 prediction 0.433807825697968 Functional Loss - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31123460 chr16:31123463 synonymous SNV . 0 24 hm5C_associated_SNPs_84147 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:31123463-31123479
64251 chr3 172534549 172534549 1 + C T LUSC 172534547 + 172534527 172534567 41 GAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGGAAGA GAAGGGCTCTTATGACATCCCATGGCTCAGTGGAGGGAAGA < 41bp 0.716903505629098 0.432736749023842 0.054136544 0.047057718 prediction 0.433807011258195 Functional Loss - ECT2 ENSG00000114346 CDS Human protein_coding chr3:172534547 chr3:172534549 synonymous SNV . 0 23 hm5C_associated_SNPs_84148 0 0 5 LIN28A POSTAR2 GSE39873,GSM980594 chr3:172534540-172534560
64251 chr19 15806828 15806828 1 + C T BLCA 15806826 + 15806806 15806846 41 TCCCCCAGCTCCCTTCATCTCCCGATGCTGCACCCAGGACA TCCCCCAGCTCCCTTCATCTCCTGATGCTGCACCCAGGACA < 41bp 0.854820552739237 0.637929586498684 0.17571878 0.27867228 prediction 0.433781932481107 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15806826 chr19:15806828 stopgain 0.175 0 23 hm5C_associated_SNPs_84155 0 0 2 GRWD1 POSTAR2 ENCODE chr19:15806816-15806880
64251 chr22 37964579 37964579 1 + C T UCEC 37964577 + 37964557 37964597 41 CAGCCCAGTGGGAGGGGGTCCCCGAGGACCTGCTGGCCCTG CAGCCCAGTGGGAGGGGGTCCCTGAGGACCTGCTGGCCCTG < 41bp 0.816343839137518 0.599461826108451 0.85239136 0.4647034 prediction 0.433764026058133 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964577 chr22:37964579 stopgain 0.019 0 23 hm5C_associated_SNPs_84161 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:37964578-37964579
64251 chrX 100666979 100666979 1 + G T UCEC 100666976 + 100666956 100666996 41 ACCAAGAGCCCAACAATCACCATGATGCTGAGCACGGAAGG ACCAAGAGCCCAACAATCACCATTATGCTGAGCACGGAAGG < 41bp 0.811639086252203 0.594757699832634 0.0513089 0.031404197 prediction 0.433762772839139 Functional Loss - HNRNPH2;RPL36A-HNRNPH2 ENSG00000126945;ENSG00000257529 CDS Human other chrX:100666976 chrX:100666979 stoploss 0.996 2 24 hm5C_associated_SNPs_84162 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:100666959-100666981
64251 chr11 65029813 65029813 1 + T C COAD 65029812 + 65029792 65029832 41 AGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGCTCTA AGGAGCTGCAGATCTTCGGCCCAGACTGCGAGGAGGCTCTA < 41bp 0.773055881832352 0.556178505341465 0.08201578 0.08833486 prediction 0.433754752981774 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65029812 chr11:65029813 nonsynonymous SNV 0.904 1 22 hm5C_associated_SNPs_84168 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:65029812-65029836
64251 chr3 183911416 183911416 1 + G A rs76223160 183911413 + 183911393 183911433 41 ATGCGAAGGAGGCGGCGTCACCCGTGTGGAAGGAGGATTTG ATGCGAAGGAGGCGGCGTCACCCATGTGGAAGGAGGATTTG < 41bp 0.769337035494959 0.552460845876297 0.16646177 0.13657334 prediction 0.433752379237324 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183911413 chr3:183911416 nonsynonymous SNV 0.045 3 24 hm5C_associated_SNPs_84172 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:183911411-183911449
64251 chr11 82645075 82645075 1 + G A BLCA 82645072 + 82645052 82645092 41 CCTATCATTTCCCTGATCAACAAGAGTTACCAAGAAAGAAA CCTATCATTTCCCTGATCAACAAAAGTTACCAAGAAAGAAA < 41bp 0.753091889994931 0.536224857208973 0.6115854 0.322765 prediction 0.433734065571916 Functional Loss - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82645072 chr11:82645075 nonsynonymous SNV 0.972 1 24 hm5C_associated_SNPs_84177 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr11:82645051-82645075
64251 chr3 58141733 58141733 1 + A C SKCM 58141729 + 58141709 58141749 41 GTTCAATGATGAGCACATCCCGGAAAGCCCCTACCTGGTGC GTTCAATGATGAGCACATCCCGGACAGCCCCTACCTGGTGC < 41bp 0.716858506613863 0.319957794564778 0.26057684 0.08918801 prediction 0.433717013227726 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58141729 chr3:58141733 nonsynonymous SNV 0.666 1 25 hm5C_associated_SNPs_84184 0 0 1 RPS3 POSTAR2 ENCODE chr3:58141723-58141746
64251 chr10 134463965 134463965 1 + C T BRCA 134463963 + 134463943 134463983 41 GATGAAAGAATATAACAGGGCTCGAGTCTACCTGGATGAAA GATGAAAGAATATAACAGGGCTTGAGTCTACCTGGATGAAA < 41bp 0.716851572952682 0.417136930959813 0.09283143 0.1062288 prediction 0.433703145905365 Functional Loss - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134463963 chr10:134463965 stopgain 0.957 1 23 hm5C_associated_SNPs_84191 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:134463958-134463978
64251 chr10 134463966 134463966 1 + G A UCEC 134463963 + 134463943 134463983 41 GATGAAAGAATATAACAGGGCTCGAGTCTACCTGGATGAAA GATGAAAGAATATAACAGGGCTCAAGTCTACCTGGATGAAA < 41bp 0.716851572952682 0.486437844874787 0.09283143 0.054849684 prediction 0.433703145905365 Functional Loss - INPP5A ENSG00000068383 CDS Human protein_coding chr10:134463963 chr10:134463966 nonsynonymous SNV 0.958 3 24 hm5C_associated_SNPs_84192 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:134463958-134463978
64251 chr19 10801401 10801401 1 + C T rs8106454 10801399 + 10801379 10801419 41 ACTGGCCAAGCCTGGGACCACACGTCTGCAGAGATCCTGCT ACTGGCCAAGCCTGGGACCACATGTCTGCAGAGATCCTGCT < 41bp 0.717616219061769 0.500766260038473 0.20999905 0.22402376 prediction 0.433699918046591 Functional Loss - ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10801399 chr19:10801401 . . 0 23 hm5C_associated_SNPs_84194 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10801377-10801402
64251 chr9 100308621 100308621 1 + G C BLCA 100308620 + 100308600 100308640 41 TCCCCTACACAGGGGAAAAACGAGGTACTGAACAATGTTAC TCCCCTACACAGGGGAAAAACCAGGTACTGAACAATGTTAC < 41bp 0.716849693718734 0.481232830754365 0.91514957 0.89948285 prediction 0.433699387437467 Functional Loss - TMOD1 ENSG00000136842 CDS Human protein_coding chr9:100308620 chr9:100308621 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_84195 0 0 5 DDX24 POSTAR2 ENCODE chr9:100308600-100308624
64251 chr5 34807938 34807938 1 + G T LIHC 34807936 + 34807916 34807956 41 AGCCGAAAGTGTCGACAGCTCTGGGAAAACAGCTTTACATT AGCCGAAAGTGTCGACAGCTCTTGGAAAACAGCTTTACATT < 41bp 0.716847083041837 0.374973304055011 0.8327228 0.27695107 prediction 0.433694166083673 Functional Loss - RAI14 ENSG00000039560 CDS Human protein_coding chr5:34807936 chr5:34807938 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_84198 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:34807918-34807939
64251 chr13 100518634 100518634 1 + C T rs41281112 100518632 + 100518612 100518652 41 AGCTGGGCTGCTTAGACAGTCACGAGAAGGAGCCGCCATGG AGCTGGGCTGCTTAGACAGTCATGAGAAGGAGCCGCCATGG < 41bp 0.85732235932599 0.640481904496942 0.4617489 0.60901916 prediction 0.433680909658097 Functional Loss - CLYBL ENSG00000125246 CDS Human protein_coding chr13:100518632 chr13:100518634 stopgain 0.101 1 23 hm5C_associated_SNPs_84199 0 1 1 GRWD1 POSTAR2 ENCODE chr13:100518542-100518662
64251 chr1 110883962 110883962 1 + T C UCEC 110883961 + 110883941 110883981 41 GCCTAGGAAGCGAAGGCTGCCTGAGGAGAGTGGAGGACGTC GCCTAGGAAGCGAAGGCTGCCCGAGGAGAGTGGAGGACGTC < 41bp 0.754943539409613 0.538114297976299 0.2576064 0.25411323 prediction 0.433658482866628 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883961 chr1:110883962 synonymous SNV . 0 22 hm5C_associated_SNPs_84204 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:110883948-110883989
64251 chr2 27305906 27305906 1 + G T COAD 27305904 + 27305884 27305924 41 GCTCTGGGGCCCCTGGGGAGCAGGACTCTCAAGTCAGCGAG GCTCTGGGGCCCCTGGGGAGCATGACTCTCAAGTCAGCGAG < 41bp 0.917664226880367 0.700835688310851 0.78132975 0.35859206 prediction 0.433657077139032 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27305904 chr2:27305906 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_84205 0 0 2 BUD13 POSTAR2 ENCODE chr2:27305860-27305941
64251 chr2 27729358 27729358 1 + G A SKCM 27729355 + 27729335 27729375 41 GCTTTTCTCCCAGATGCCTCCTGGAAATCTTGCGGACATTT GCTTTTCTCCCAGATGCCTCCTGAAAATCTTGCGGACATTT < 41bp 0.784733236980477 0.567908614915178 0.40179098 0.27237087 prediction 0.433649244130598 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27729355 chr2:27729358 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_84210 0 0 2 PRPF8 POSTAR2 ENCODE chr2:27729327-27729361
64251 chr16 67237459 67237459 1 + C T UCEC 67237457 + 67237437 67237477 41 GTGGGGAGGAGGAAGCGTACCTCAACTTCATTGCCCCCTCC GTGGGGAGGAGGAAGCGTACCTTAACTTCATTGCCCCCTCC < 41bp 0.855467560759084 0.638644887892639 0.8486176 0.50553083 prediction 0.433645345732889 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67237457 chr16:67237459 synonymous SNV . 0 23 hm5C_associated_SNPs_84212 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:67237437-67237485
64251 chr19 1036574 1036574 1 + C T rs2304261 1036572 + 1036552 1036592 41 TGCCAGCCAGGTGGGGCTCGCCCGGGTGCCCCCGACTCCTC TGCCAGCCAGGTGGGGCTCGCCTGGGTGCCCCCGACTCCTC < 41bp 0.716822394641999 0.469470025652758 0.5345227 0.35203707 prediction 0.433644789283997 Functional Loss - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036572 chr19:1036574 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_84213 0 0 1 PRPF8 POSTAR2 ENCODE chr19:1036556-1036610
64251 chr19 1036575 1036575 1 + G A rs2304260 1036572 + 1036552 1036592 41 TGCCAGCCAGGTGGGGCTCGCCCGGGTGCCCCCGACTCCTC TGCCAGCCAGGTGGGGCTCGCCCAGGTGCCCCCGACTCCTC < 41bp 0.716822394641999 0.465608437082838 0.5345227 0.08606979 prediction 0.433644789283997 Functional Loss - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036572 chr19:1036575 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_84214 0 0 1 PRPF8 POSTAR2 ENCODE chr19:1036556-1036610
64251 chr12 121432032 121432032 1 + C T CESC 121432030 + 121432010 121432050 41 GGGCTGGGCTCCAACCTCGTCACGGAGGTGCGTGTCTACAA GGGCTGGGCTCCAACCTCGTCATGGAGGTGCGTGTCTACAA < 41bp 0.832525340680301 0.615709012052885 0.19036704 0.28618023 prediction 0.433632657254831 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121432030 chr12:121432032 nonsynonymous SNV 0.986 5 23 hm5C_associated_SNPs_84217 1 0 1 PPIG POSTAR2 ENCODE chr12:121431969-121432046
64251 chr17 79857235 79857235 1 + G A LGG 79857232 + 79857212 79857252 41 CAACACAGCTTCCCCAACGCCTGGGCAGCACACCGGATCCC CAACACAGCTTCCCCAACGCCTGAGCAGCACACCGGATCCC < 41bp 0.800974682283293 0.584170028167346 0.07044998 0.028080553 prediction 0.433609308231894 Functional Loss - ANAPC11 ENSG00000141552 CDS Human protein_coding chr17:79857232 chr17:79857235 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_84225 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79857227-79857252
64251 chr2 71591155 71591155 1 + G A BLCA 71591152 + 71591132 71591172 41 TTCCCCCAGTCCTAGGCGTTCTAGAAGATCAAGCTCAAGTC TTCCCCCAGTCCTAGGCGTTCTAAAAGATCAAGCTCAAGTC < 41bp 0.758018484276818 0.541213911580847 0.29361778 0.2566576 prediction 0.433609145391942 Functional Loss - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71591152 chr2:71591155 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_84226 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71591095-71591195
64251 chr12 81528636 81528636 1 + G T UCEC 81528633 + 81528613 81528653 41 GTCTTGGTCAAGCATGGCATCAAGAAAGGTGACACTGTGGT GTCTTGGTCAAGCATGGCATCAATAAAGGTGACACTGTGGT < 41bp 0.716802862667014 0.324870213770726 0.7173787 0.21948054 prediction 0.433605725334029 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81528633 chr12:81528636 nonsynonymous SNV 0.975 0 24 hm5C_associated_SNPs_84227 0 0 3 PPIG POSTAR2 ENCODE chr12:81528592-81528666
64251 chr19 35435190 35435190 1 + C T UCEC 35435188 + 35435168 35435208 41 GTGGCAAAGCCTTTATTAGTCGCCATCAGCTTACCGTACAT GTGGCAAAGCCTTTATTAGTCGTCATCAGCTTACCGTACAT < 41bp 0.848379485099587 0.631578609985002 0.21804923 0.08380899 prediction 0.43360175022917 Functional Loss - ZNF30 ENSG00000168661 CDS Human protein_coding chr19:35435188 chr19:35435190 synonymous SNV . 0 23 hm5C_associated_SNPs_84229 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:35435189-35435213
64251 chr8 104342270 104342270 1 + T C ESCA 104342269 + 104342249 104342289 41 GGGCCAGGCAGGCAGTGTATCTGAAAGTGCGCGGAGTGAAG GGGCCAGGCAGGCAGTGTATCCGAAAGTGCGCGGAGTGAAG < 41bp 0.79904915828627 0.582251171547407 0.11904788 0.17894375 prediction 0.433595973477725 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104342269 chr8:104342270 synonymous SNV . 0 22 hm5C_associated_SNPs_84231 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:104342235-104342271
64251 chr3 56627979 56627979 1 + C T SKCM 56627976 + 56627956 56627996 41 GTATGTATCTTGCCAGCTTTCTCCGTTCTATGACTGCTCTC GTATGTATCTTGCCAGCTTTCTCTGTTCTATGACTGCTCTC < 41bp 0.720531581639518 0.503733925380686 0.34931746 0.15593097 prediction 0.433595312517664 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56627976 chr3:56627979 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_84232 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:56627971-56628042
64251 chr20 13145506 13145506 1 + G A SKCM 13145503 + 13145483 13145523 41 ATGATGAGACGAGCTTTGAACTCGAAGATTAAGTTTCCTGG ATGATGAGACGAGCTTTGAACTCAAAGATTAAGTTTCCTGG < 41bp 0.747788002443625 0.531000014550278 0.18344387 0.03958702 prediction 0.433575975786695 Functional Loss - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13145503 chr20:13145506 nonsynonymous SNV 0.950 2 24 hm5C_associated_SNPs_84237 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:13145490-13145510
64251 chr6 7590603 7590603 1 + G T rs551596030 7590601 + 7590581 7590621 41 GAGGTGACCGCGTCCCTGGGCTGGGACCTAGATAGTCTGGA GAGGTGACCGCGTCCCTGGGCTTGGACCTAGATAGTCTGGA < 41bp 0.716786826290877 0.364627909730946 0.27810338 0.21337467 prediction 0.433573652581754 Functional Loss - SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7590601 chr6:7590603 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_84239 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7590557-7590611
64251 chr17 26654122 26654122 1 + G A rs562056352 26654119 + 26654099 26654139 41 TTCCTTAGCCTCCCAAGTAGCTAGAACTACAGGTGTGTACC TTCCTTAGCCTCCCAAGTAGCTAAAACTACAGGTGTGTACC < 41bp 0.781501854252463 0.564717779275753 0.7304192 0.7316883 prediction 0.43356814995342 Functional Loss - TMEM97 ENSG00000109084 UTR3 Human protein_coding chr17:26654119 chr17:26654122 . . 0 24 hm5C_associated_SNPs_84242 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:26654091-26654122
64251 chr1 168014363 168014363 1 + A C COAD 168014359 + 168014339 168014379 41 AAGCCACTGGGCCTTCAGCTCATGAAGAAACATCCACCAGG AAGCCACTGGGCCTTCAGCTCATGCAGAAACATCCACCAGG < 41bp 0.716783195443706 0.325462883088414 0.40319297 0.3069358 prediction 0.433566390887412 Functional Loss - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014359 chr1:168014363 nonsynonymous SNV 0.835 3 25 hm5C_associated_SNPs_84244 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:168014338-168014363
64251 chr16 68862142 68862142 1 + C T SKCM 68862140 + 68862120 68862160 41 GGTCAAAGAGCCCTTACTGCCCCCAGAGGATGACACCCGGG GGTCAAAGAGCCCTTACTGCCCTCAGAGGATGACACCCGGG < 41bp 0.716777322863513 0.418859078102832 0.09201735 0.095478445 prediction 0.433554645727027 Functional Loss - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68862140 chr16:68862142 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_84249 0 0 2 SND1 POSTAR2 ENCODE chr16:68862094-68862163
64251 chr4 8475361 8475361 1 + G C rs143104422 8475357 + 8475337 8475377 41 CCTGTGCTGAGGTAGAGTCCCAGGGGATGCGCACGGTAAGG CCTGTGCTGAGGTAGAGTCCCAGGCGATGCGCACGGTAAGG < 41bp 0.716765137969235 0.420472869631658 0.8952045 0.85476923 prediction 0.43353027593847 Functional Loss - TRMT44 ENSG00000155275 intronic Human protein_coding chr4:8475357 chr4:8475361 . . 0 25 hm5C_associated_SNPs_84257 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:8475349-8475384
64251 chr1 223943271 223943271 1 + G A STAD 223943268 + 223943248 223943288 41 GGGAGAGCGGCTGCACCTTCCTGGTGGGGCTCATTCAGAAG GGGAGAGCGGCTGCACCTTCCTGATGGGGCTCATTCAGAAG < 41bp 0.793402391509052 0.576639145359588 0.26371264 0.0899179 prediction 0.433526492298927 Functional Loss - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223943268 chr1:223943271 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_84259 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:223943257-223943285
64251 chr18 8784699 8784699 1 + T C UCEC 8784698 + 8784678 8784718 41 AGAAAGAGCTGCAGGCCTTCCTGGAGCAGGTGAACCGCATT AGAAAGAGCTGCAGGCCTTCCCGGAGCAGGTGAACCGCATT < 41bp 0.817180035380303 0.600421651351672 0.8522125 0.9008383 prediction 0.433516768057263 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8784698 chr18:8784699 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_84262 0 0 1 RBM15 POSTAR2 ENCODE chr18:8784674-8784766
64251 chr19 48965635 48965635 1 + C T COAD 48965633 + 48965613 48965653 41 ACCGCCTCTGCCTCATGTGGCGCGTCGGCAACCTGCGCCGC ACCGCCTCTGCCTCATGTGGCGTGTCGGCAACCTGCGCCGC < 41bp 0.716756130105217 0.483009378850919 0.20867467 0.20055011 prediction 0.433512260210435 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48965633 chr19:48965635 synonymous SNV . 0 23 hm5C_associated_SNPs_84263 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:48965614-48965646
64251 chr16 3187307 3187307 1 + A T GBM 3187303 + 3187283 3187323 41 TGGCAGCCCCCTTGGAGGCCCAGGACCAGGCCCCTGGGGAG TGGCAGCCCCCTTGGAGGCCCAGGTCCAGGCCCCTGGGGAG < 41bp 0.875286187209903 0.658532644151093 0.85488355 0.75108415 prediction 0.43350708611762 Functional Loss - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3187303 chr16:3187307 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_84264 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3187304-3187342
64251 chr13 76179901 76179901 1 + G A COAD 76179898 + 76179878 76179918 41 TTTGCAAGAAGTTTATGGAGCGCGACCCTGATGAACTAAGA TTTGCAAGAAGTTTATGGAGCGCAACCCTGATGAACTAAGA < 41bp 0.735320261976146 0.518566908381088 0.02727285 0.028066188 prediction 0.433506707190115 Functional Loss - UCHL3 ENSG00000118939 CDS Human protein_coding chr13:76179898 chr13:76179901 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_84266 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr13:76179872-76179917
64251 chr15 85164147 85164147 1 + G A COAD 85164144 + 85164124 85164164 41 GGAAATCCCACCTCATCACACACGAGAGGACCCACACAGGA GGAAATCCCACCTCATCACACACAAGAGGACCCACACAGGA < 41bp 0.787836131079904 0.571082803174138 0.044519305 0.029556453 prediction 0.433506655811533 Functional Loss - ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164144 chr15:85164147 nonsynonymous SNV 0.371 0 24 hm5C_associated_SNPs_84267 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:85164125-85164147
64251 chr4 52960700 52960700 1 + G A PRAD 52960697 + 52960677 52960717 41 CTTTTATATTTTCCAGATGTCTCGAAGTCGGAGTCCTTCTC CTTTTATATTTTCCAGATGTCTCAAAGTCGGAGTCCTTCTC < 41bp 0.749505137818375 0.532752194563963 0.83283246 0.14537814 prediction 0.433505886508824 Functional Loss - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52960697 chr4:52960700 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_84268 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:52960692-52960739
64251 chr20 43246999 43246999 1 + G A HNSC 43246996 + 43246976 43247016 41 CAGAGCAGCGATGGGACCACCTCGTCTTGAATCTGACCTTG CAGAGCAGCGATGGGACCACCTCATCTTGAATCTGACCTTG < 41bp 0.71674727947096 0.48295566674328 0.15440357 0.2961362 prediction 0.433494558941919 Functional Loss - PKIG ENSG00000168734 CDS Human protein_coding chr20:43246996 chr20:43246999 synonymous SNV . 0 24 hm5C_associated_SNPs_84270 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:43246977-43247004
64251 chr8 120435102 120435102 1 + G T UCEC 120435099 + 120435079 120435119 41 GGAAAAAAGTGTCTCCGCACCAAGAAGTCACTCAAAGCCAT GGAAAAAAGTGTCTCCGCACCAATAAGTCACTCAAAGCCAT < 41bp 0.716737117658866 0.341713775292017 0.1357106 0.07700911 prediction 0.433474235317733 Functional Loss - NOV ENSG00000136999 CDS Human protein_coding chr8:120435099 chr8:120435102 nonsynonymous SNV 0.618 1 24 hm5C_associated_SNPs_84275 0 0 1 DGCR8 POSTAR2 ENCODE chr8:120435077-120435108
64251 chr16 89790026 89790026 1 + G A COAD 89790023 + 89790003 89790043 41 GAGACCAAGACCCTGCCCAGCACGGATGTGGCCCAGCCTCC GAGACCAAGACCCTGCCCAGCACAGATGTGGCCCAGCCTCC < 41bp 0.791202966973117 0.574467114842872 0.4298677 0.39036316 prediction 0.433471704260491 Functional Loss - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89790023 chr16:89790026 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_84277 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr16:89789994-89790027
64251 chr7 100730794 100730794 1 + C T COAD 100730792 + 100730772 100730812 41 GCGAGACAGTGCCTGTGCCGCCCGAGGGTGTGGCCTCCTTC GCGAGACAGTGCCTGTGCCGCCTGAGGGTGTGGCCTCCTTC < 41bp 0.818138791517045 0.601404601201125 0.09106395 0.22227201 prediction 0.433468380631841 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730792 chr7:100730794 synonymous SNV . 0 23 hm5C_associated_SNPs_84279 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100730769-100730814
64251 chr1 47515726 47515726 1 + G A SKCM 47515723 + 47515703 47515743 41 GAGTTAAAGGTAACCATTGCCTTGATTCTGCTCCACTTCAG GAGTTAAAGGTAACCATTGCCTTAATTCTGCTCCACTTCAG < 41bp 0.754739063073881 0.538005271206983 0.63312316 0.39549267 prediction 0.433467583733797 Functional Loss - CYP4X1 ENSG00000186377 CDS Human protein_coding chr1:47515723 chr1:47515726 synonymous SNV . 0 24 hm5C_associated_SNPs_84281 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:47515712-47515750
64251 chr12 71978453 71978453 1 + C T LGG 71978450 + 71978430 71978470 41 GCCTCCCAGTTCCGTGCCATCACCAGCTTATCCAGTGACTG GCCTCCCAGTTCCGTGCCATCACTAGCTTATCCAGTGACTG < 41bp 0.729446890480494 0.512714655999673 0.09137052 0.06283936 prediction 0.433464468961642 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71978450 chr12:71978453 nonsynonymous SNV 0.173 1 24 hm5C_associated_SNPs_84282 0 0 2 EIF3H POSTAR2 ENCODE chr12:71978409-71978480
64251 chr11 68700827 68700827 1 + G A UCEC 68700824 + 68700804 68700844 41 CGCCTGGCTGAGGAGTACGGCGCGAGGGTGGTGCGGACACT CGCCTGGCTGAGGAGTACGGCGCAAGGGTGGTGCGGACACT < 41bp 0.811204005309295 0.594473396227472 0.59222895 0.32330137 prediction 0.433461218163647 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68700824 chr11:68700827 synonymous SNV . 0 24 hm5C_associated_SNPs_84283 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:68700797-68700829
64251 chr3 32280178 32280178 1 + A C rs141871995 32280177 + 32280157 32280197 41 CCTCCCCTCCTCCGGGCCTCCACCGCCTTCCCCGGCTGCCC CCTCCCCTCCTCCGGGCCTCCCCCGCCTTCCCCGGCTGCCC < 41bp 0.747383218833793 0.530655593444725 0.20289108 0.2140795 prediction 0.433455250778137 Functional Loss - CMTM8 ENSG00000170293 UTR5 Human protein_coding chr3:32280177 chr3:32280178 . . 0 22 hm5C_associated_SNPs_84284 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:32280172-32280198
64251 chr15 69695942 69695942 1 + C T DLBC 69695940 + 69695920 69695960 41 GTCACAGTCACCAGCTGTTTCACGTGTGTGTGATCCTGGCC GTCACAGTCACCAGCTGTTTCATGTGTGTGTGATCCTGGCC < 41bp 0.71672724930306 0.447452902664356 0.20124128 0.12712449 prediction 0.43345449860612 Functional Loss - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69695940 chr15:69695942 synonymous SNV . 0 23 hm5C_associated_SNPs_84285 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:69695931-69695957
64251 chr12 51122459 51122459 1 + C T LUSC 51122456 + 51122436 51122476 41 GGCTTCGCGCTCTGGTGTCTCTGCAGGTAGGGATGGAAAAG GGCTTCGCGCTCTGGTGTCTCTGTAGGTAGGGATGGAAAAG < 41bp 0.736127074906676 0.51940009575739 0.33779585 0.22285873 prediction 0.433453958298571 Functional Loss - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51122456 chr12:51122459 synonymous SNV . 0 24 hm5C_associated_SNPs_84286 0 0 1 PRPF8 POSTAR2 ENCODE chr12:51122435-51122490
64251 chr17 7189135 7189135 1 + A C SKCM 7189131 + 7189111 7189151 41 TGGTTCATCGTGGCCGAGCTCTTCAGCCAGGGACCCCGCCC TGGTTCATCGTGGCCGAGCTCTTCCGCCAGGGACCCCGCCC < 41bp 0.71671692075556 0.287284158671217 0.206779 0.16600466 prediction 0.43343384151112 Functional Loss - SLC2A4 ENSG00000181856 CDS Human protein_coding chr17:7189131 chr17:7189135 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_84294 0 0 1 SND1 POSTAR2 ENCODE chr17:7189108-7189184
64251 chr16 90028254 90028254 1 + G A UCEC 90028251 + 90028231 90028271 41 CCTGCACGCGTTGTACACAACTGGGACTTTGAGCCTCGAAA CCTGCACGCGTTGTACACAACTGAGACTTTGAGCCTCGAAA < 41bp 0.795925459166783 0.579211531304751 0.38197213 0.29590946 prediction 0.433427855724065 Functional Loss - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028251 chr16:90028254 stopgain 1.000 1 24 hm5C_associated_SNPs_84296 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:90028234-90028261
64251 chr13 48807387 48807387 1 + G C rs572688262 48807386 + 48807366 48807406 41 GCTTCCCGAACCTCTTCAGCCGCCCGGAGCCGCTCCCGGAG GCTTCCCGAACCTCTTCAGCCCCCCGGAGCCGCTCCCGGAG < 41bp 0.842575038432717 0.625866385878902 0.32828113 0.117437184 prediction 0.433417305107631 Functional Loss - ITM2B ENSG00000136156 UTR5 Human protein_coding chr13:48807386 chr13:48807387 . . 0 22 hm5C_associated_SNPs_84300 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:48807340-48807440
64251 chr16 21416240 21416240 1 - G A CESC 21416242 - 21416222 21416262 41 CACCCTCAGCGGATGATAATCTCAAGACACCTCCCGAGTGT CACCCTCAGCGGATGATAATCTTAAGACACCTCCCGAGTGT < 41bp 0.861321214604975 0.644613216031618 0.26266974 0.30848765 prediction 0.433415997146713 Functional Loss - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416242 chr16:21416240 synonymous SNV . 0 23 hm5C_associated_SNPs_84301 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:21416215-21416247
64251 chr16 77227419 77227419 1 + C T COAD 77227417 + 77227397 77227437 41 AGAGGCCCTGTCAAGCACCTCTCGGCTCTGGAGTCCTGCAG AGAGGCCCTGTCAAGCACCTCTTGGCTCTGGAGTCCTGCAG < 41bp 0.716703897391359 0.455724119502496 0.3077381 0.15773022 prediction 0.433407794782717 Functional Loss - MON1B ENSG00000103111 CDS Human protein_coding chr16:77227417 chr16:77227419 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_84306 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:77227408-77227446
64251 chr15 65856658 65856658 1 + C T SKCM 65856655 + 65856635 65856675 41 AGCAATTGGAGTCACTACGTCACCGGTGCTGCCTTCTCTGA AGCAATTGGAGTCACTACGTCACTGGTGCTGCCTTCTCTGA < 41bp 0.716701882513831 0.498011784502945 0.19584954 0.22853708 prediction 0.433403765027662 Functional Loss - HACD3 ENSG00000074696 CDS Human protein_coding chr15:65856655 chr15:65856658 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_84307 0 0 14 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:65856642-65856663
64251 chr17 62523293 62523293 1 + G A GBM 62523290 + 62523270 62523310 41 TGACCATAAAGAAGAAAATACTGGAAATGAGGAGGTAGAGG TGACCATAAAGAAGAAAATACTGAAAATGAGGAGGTAGAGG < 41bp 0.779741909830371 0.563041298829727 0.3555346 0.31032908 prediction 0.433401222001287 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62523290 chr17:62523293 nonsynonymous SNV 0.018 3 24 hm5C_associated_SNPs_84308 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:62523269-62523295
64251 chr20 37570699 37570699 1 + T C SKCM 37570698 + 37570678 37570718 41 GAGTTGCTGTGTATATCCTTCTGGACCAGGCTCTCCTCTCT GAGTTGCTGTGTATATCCTTCCGGACCAGGCTCTCCTCTCT < 41bp 0.716700077931876 0.464010213477391 0.11446661 0.21733853 prediction 0.433400155863752 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570698 chr20:37570699 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_84310 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr20:37570686-37570726
64251 chr1 15386773 15386773 1 + G A SKCM 15386770 + 15386750 15386790 41 ACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCC ACCGAGCGACATCAACTCCCCTCAACACCGGACACACTCCC < 41bp 0.716696071123368 0.486407421170263 0.46693248 0.052726477 prediction 0.433392142246735 Functional Loss - KAZN ENSG00000189337 CDS Human protein_coding chr1:15386770 chr1:15386773 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_84314 0 0 4 GRWD1 POSTAR2 ENCODE chr1:15386764-15386810
64251 chr1 15386772 15386772 1 + C T UCEC 15386770 + 15386750 15386790 41 ACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCC ACCGAGCGACATCAACTCCCCTTGACACCGGACACACTCCC < 41bp 0.716696071123368 0.434964963931548 0.46693248 0.03174746 prediction 0.433392142246735 Functional Loss - KAZN ENSG00000189337 CDS Human protein_coding chr1:15386770 chr1:15386772 stopgain 0.990 1 23 hm5C_associated_SNPs_84315 0 0 4 GRWD1 POSTAR2 ENCODE chr1:15386764-15386810
64251 chr15 89856164 89856164 1 + A T KIRP 89856160 + 89856140 89856180 41 GAGTAAGAGCCTGAACTATACGGGAGAGAAAAAGGAGAAAC GAGTAAGAGCCTGAACTATACGGGTGAGAAAAAGGAGAAAC < 41bp 0.885472275982661 0.668781932457893 0.4913519 0.40450382 prediction 0.433380687049535 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89856160 chr15:89856164 synonymous SNV . 0 25 hm5C_associated_SNPs_84319 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:89856148-89856172
64251 chr17 40453425 40453425 1 + C T HNSC 40453422 + 40453402 40453442 41 CCCCAGGTGAAGGCCACCATCATCAGTGAGCAGCAGGCCAA CCCCAGGTGAAGGCCACCATCATTAGTGAGCAGCAGGCCAA < 41bp 0.746249876831328 0.529563896421582 0.14880902 0.091581106 prediction 0.433371960819492 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40453422 chr17:40453425 synonymous SNV . 0 24 hm5C_associated_SNPs_84323 0 0 1 FMR1 POSTAR2 ENCODE chr17:40453346-40453437
64251 chr5 52356848 52356848 1 + C T STAD 52356846 + 52356826 52356866 41 GTGAATGAGAATGGCAATATCACGGTTATTCAGGCTCACCG GTGAATGAGAATGGCAATATCATGGTTATTCAGGCTCACCG < 41bp 0.819890747058773 0.6032130126894 0.7984097 0.6693907 prediction 0.433355468738746 Functional Loss - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52356846 chr5:52356848 nonsynonymous SNV 0.912 3 23 hm5C_associated_SNPs_84329 0 0 1 FASTKD2 POSTAR2 ENCODE chr5:52356847-52356872
64251 chr17 36909582 36909582 1 + G T COAD 36909579 + 36909559 36909599 41 GCCGGGCTCGCCACTGACGTCCAGACAGTGTAAGTTTCAAG GCCGGGCTCGCCACTGACGTCCATACAGTGTAAGTTTCAAG < 41bp 0.716672205953181 0.327905011270455 0.12592453 0.101407856 prediction 0.433344411906363 Functional Loss - PSMB3 ENSG00000108294 CDS Human other chr17:36909579 chr17:36909582 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84333 0 0 4 RPS3 POSTAR2 ENCODE chr17:36909525-36909588
64251 chr18 8786016 8786016 1 + G A KIRC 8786013 + 8785993 8786033 41 GAGCCTGCGCCTCCGAGCCGCGCGGGAGCTGCACCGCCGCG GAGCCTGCGCCTCCGAGCCGCGCAGGAGCTGCACCGCCGCG < 41bp 0.810430111128316 0.593759159999062 0.8905577 0.8550068 prediction 0.433341902258509 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8786013 chr18:8786016 nonsynonymous SNV 0.657 0 24 hm5C_associated_SNPs_84335 0 0 1 FXR2 POSTAR2 ENCODE chr18:8785948-8786077
64251 chr2 220367130 220367130 1 + C T UCEC 220367127 + 220367107 220367147 41 AACAGGACGCAATCCCTCAACTACGGCTGCATCGTTGAGAA AACAGGACGCAATCCCTCAACTATGGCTGCATCGTTGAGAA < 41bp 0.733206313785741 0.516544767787785 0.36697978 0.30848062 prediction 0.433323091995911 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220367127 chr2:220367130 synonymous SNV . 0 24 hm5C_associated_SNPs_84339 0 0 1 BUD13 POSTAR2 ENCODE chr2:220367106-220367152
64251 chr13 114154442 114154442 1 + G A UCEC 114154439 + 114154419 114154459 41 GCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTA GCCCAGAGATTCAACCATCCCACATGCAGATCACCACTTTA < 41bp 0.716658638715009 0.477605967670457 0.03696829 0.034574986 prediction 0.433317277430018 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114154439 chr13:114154442 nonsynonymous SNV 0.152 1 24 hm5C_associated_SNPs_84343 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114154426-114154447
64251 chr13 114154441 114154441 1 + C T UCEC 114154439 + 114154419 114154459 41 GCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTA GCCCAGAGATTCAACCATCCCATGTGCAGATCACCACTTTA < 41bp 0.716658638715009 0.432965531538678 0.03696829 0.06515646 prediction 0.433317277430018 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114154439 chr13:114154441 nonsynonymous SNV 0.143 3 23 hm5C_associated_SNPs_84344 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114154426-114154447
64251 chr5 177378450 177378450 1 + C T rs544460873 177378448 + 177378428 177378468 41 TCCAGCCCCTCAGTGTTTTCCTCGGTCCTGGGGATGCTCAG TCCAGCCCCTCAGTGTTTTCCTTGGTCCTGGGGATGCTCAG < 41bp 0.732899606604615 0.516245262482445 0.40462658 0.213294 prediction 0.433308688244339 Functional Loss - LOC728554;PROP1 ENSG00000249684 ncRNA_exonic Human antisense chr5:177378448 chr5:177378450 . . 0 23 hm5C_associated_SNPs_84346 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:177378450-177378488
64251 chr6 31783547 31783547 1 + C T CESC 31783545 + 31783525 31783565 41 GGAACCGGCATGGCCAAAGCCGCGGCGATCGGCATCGACCT GGAACCGGCATGGCCAAAGCCGTGGCGATCGGCATCGACCT < 41bp 0.769046916496288 0.552394845256955 0.4286584 0.24888381 prediction 0.433304142478666 Functional Loss - HSPA1A ENSG00000204389 CDS Human protein_coding chr6:31783545 chr6:31783547 nonsynonymous SNV 0.892 0 23 hm5C_associated_SNPs_84349 0 0 2 RPS3 POSTAR2 ENCODE chr6:31783364-31783550
64251 chr6 43267376 43267376 1 + G T SKCM 43267372 + 43267352 43267392 41 GACCCCTTTGCAGGTTTGGGCGGCGGCGTCTGCTGCTGGTA GACCCCTTTGCAGGTTTGGGCGGCTGCGTCTGCTGCTGGTA < 41bp 0.720445183836609 0.503794292708076 0.9112843 0.886806 prediction 0.433301782257067 Functional Loss - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43267372 chr6:43267376 nonsynonymous SNV 0.725 4 25 hm5C_associated_SNPs_84350 0 0 1 EFTUD2 POSTAR2 ENCODE chr6:43267372-43267398
64251 chr16 30680217 30680217 1 + T C COAD 30680216 + 30680196 30680236 41 TCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCCAG TCCTGCCTGGGTCCGGCCCCCCGAGGCCGCCCGGACTCCAG < 41bp 0.804670561033612 0.588020500044808 0.37786242 0.38502753 prediction 0.433300121977609 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680216 chr16:30680217 synonymous SNV . 0 22 hm5C_associated_SNPs_84351 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30680175-30680217
64251 chr10 8006719 8006719 1 + G T LUAD 8006717 + 8006697 8006737 41 ATTTTCTTCTGGATCGGAATCTGAAGGAGACATTTTTACTA ATTTTCTTCTGGATCGGAATCTTAAGGAGACATTTTTACTA < 41bp 0.716646512260624 0.379944613272044 0.40926623 0.32707447 prediction 0.433293024521249 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006717 chr10:8006719 stopgain 0.979 1 23 hm5C_associated_SNPs_84353 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr10:8006695-8006722
64251 chr1 32694789 32694789 1 + G T CESC 32694786 + 32694766 32694806 41 GATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC GATGTAACCACAACCTCCACCAGTATTGGCAAGTTTGAGGC < 41bp 0.931027935668872 0.714384397757823 0.7156846 0.15024826 prediction 0.433287075822097 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32694786 chr1:32694789 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_84356 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32694736-32694790
64251 chr16 1550679 1550679 1 + G A CESC 1550676 + 1550656 1550696 41 GTTAGTGCCCGGATCCACCCCGAGGGGCCTCCCCTGAAATT GTTAGTGCCCGGATCCACCCCGAAGGGCCTCCCCTGAAATT < 41bp 0.816787523023124 0.600144474967375 0.869281 0.31322822 prediction 0.433286096111498 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550676 chr16:1550679 synonymous SNV . 0 24 hm5C_associated_SNPs_84358 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr22 45828232 45828232 1 + G A UCEC 45828229 + 45828209 45828249 41 CTATTTCACACAATTTAATACAGGAAGTCGATAATGAGGAA CTATTTCACACAATTTAATACAGAAAGTCGATAATGAGGAA < 41bp 0.760214488555768 0.543574663399708 0.16598952 0.076697856 prediction 0.433279650312122 Functional Loss - RIBC2 ENSG00000128408 CDS Human protein_coding chr22:45828229 chr22:45828232 nonsynonymous SNV 0.025 0 24 hm5C_associated_SNPs_84360 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr22:45828229-45828250
64251 chr1 193053765 193053765 1 + C T SKCM 193053762 + 193053742 193053782 41 GGAATGACATCAAATGGTTTCACCATTGCAGACCCAGATGA GGAATGACATCAAATGGTTTCACTATTGCAGACCCAGATGA < 41bp 0.732758328460571 0.516124449353839 0.051662713 0.06590283 prediction 0.433267758213462 Functional Loss - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193053762 chr1:193053765 synonymous SNV . 0 24 hm5C_associated_SNPs_84365 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:193053710-193053766
64251 chr3 191093211 191093211 1 + G A UCEC 191093208 + 191093188 191093228 41 TCGAAATTGGGAAAAACAGTCTCGACACCAAGATCGACTTT TCGAAATTGGGAAAAACAGTCTCAACACCAAGATCGACTTT < 41bp 0.742041424339594 0.525417747331683 0.2880031 0.011978298 prediction 0.433247354015822 Functional Loss - CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191093208 chr3:191093211 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_84368 0 0 1 UCHL5 POSTAR2 ENCODE chr3:191093197-191093277
64251 chr1 109777939 109777939 1 + C T SKCM 109777937 + 109777917 109777957 41 CCCTGCACCGGGATGAGTGGCTCCGGCCGGAGGACCTGCCC CCCTGCACCGGGATGAGTGGCTTCGGCCGGAGGACCTGCCC < 41bp 0.825448995330832 0.608828165079283 0.54794127 0.37506193 prediction 0.433241660503098 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109777937 chr1:109777939 synonymous SNV . 0 23 hm5C_associated_SNPs_84371 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr11 64974124 64974124 1 + C T LUAD 64974122 + 64974102 64974142 41 GACTTCGTGCTGCGCTTCTTCTCAGAGAAGAGTGCTGGGAC GACTTCGTGCTGCGCTTCTTCTTAGAGAAGAGTGCTGGGAC < 41bp 0.716617476085528 0.429806635442017 0.23860085 0.286043 prediction 0.433234952171057 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64974122 chr11:64974124 nonsynonymous SNV 0.542 4 23 hm5C_associated_SNPs_84375 0 0 5 DDX24 POSTAR2 ENCODE chr11:64974114-64974146
64251 chr14 96848756 96848756 1 + C T LAML 96848753 + 96848733 96848773 41 ACATGTTTGTCTCGAAAAGCCTGCGGTGTGCGGATGATGTG ACATGTTTGTCTCGAAAAGCCTGTGGTGTGCGGATGATGTG < 41bp 0.759434622978229 0.542818608706658 0.042846322 0.022351265 prediction 0.433232028543143 Functional Loss - GSKIP ENSG00000100744 CDS Human protein_coding chr14:96848753 chr14:96848756 nonsynonymous SNV 0.964 1 24 hm5C_associated_SNPs_84377 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr14:96848676-96848771
64251 chrX 55033350 55033350 1 + G A UCEC 55033347 + 55033327 55033367 41 TCCTTCGCTTCCTAGTTCCTCTCGAACAAAGTCCTGTGTTG TCCTTCGCTTCCTAGTTCCTCTCAAACAAAGTCCTGTGTTG < 41bp 0.802881706086129 0.586281463111655 0.7144095 0.6544061 prediction 0.433200485948947 Functional Loss - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033347 chrX:55033350 nonsynonymous SNV 0.100 0 24 hm5C_associated_SNPs_84389 0 0 1 FBL POSTAR2 GSE43666,GSM1067865 chrX:55033323-55033359
64251 chr22 46685396 46685396 1 + G A UCEC 46685393 + 46685373 46685413 41 CTGAGGACGGGAACCCTGACCGCGTCCTGGAGCTGCTCCTG CTGAGGACGGGAACCCTGACCGCATCCTGGAGCTGCTCCTG < 41bp 0.81398503682639 0.597388436609986 0.3876556 0.37900633 prediction 0.433193200432808 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46685393 chr22:46685396 nonsynonymous SNV 0.048 1 24 hm5C_associated_SNPs_84391 0 0 3 RPS3 POSTAR2 ENCODE chr22:46685314-46685404
64251 chr3 52836407 52836407 1 + G A SKCM 52836404 + 52836384 52836424 41 CGGGTGTGGAGATGGAGTACCCCGAGAACGCTATCCTGGAC CGGGTGTGGAGATGGAGTACCCCAAGAACGCTATCCTGGAC < 41bp 0.794282371938345 0.577688595840336 0.27816963 0.42977095 prediction 0.433187552196018 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836404 chr3:52836407 nonsynonymous SNV 0.952 0 24 hm5C_associated_SNPs_84396 0 0 4 LIN28B POSTAR2 ENCODE chr3:52836394-52836436
64251 chr19 17597532 17597532 1 + G T COAD 17597529 + 17597509 17597549 41 AGTGCTGGACCTTTGCGCAGCTGGACGCCTACTCCAATGCG AGTGCTGGACCTTTGCGCAGCTGTACGCCTACTCCAATGCG < 41bp 0.716579109426141 0.323414422650849 0.27660006 0.10651463 prediction 0.433158218852282 Functional Loss - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17597529 chr19:17597532 nonsynonymous SNV 0.906 2 24 hm5C_associated_SNPs_84402 0 0 1 SND1 POSTAR2 ENCODE chr19:17597464-17597564
64251 chr3 52723293 52723293 1 + T C rs183506718 52723292 + 52723272 52723312 41 AGGAAACAGTCTGATAGTCACTGAAGACTGATTAGATCCAA AGGAAACAGTCTGATAGTCACCGAAGACTGATTAGATCCAA < 41bp 0.718049860363708 0.501475558520151 0.055809915 0.047155052 prediction 0.433148603687113 Functional Loss - SNORD19 ENSG00000212493 ncRNA_exonic Human snoRNA chr3:52723292 chr3:52723293 . . 0 22 hm5C_associated_SNPs_84405 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:52723257-52723331
64251 chr14 74665674 74665674 1 + G A UCEC 74665671 + 74665651 74665691 41 CTCAATATTCTAGAGAAGCCCAAGAAGTAGCAGCTGCTTGC CTCAATATTCTAGAGAAGCCCAAAAAGTAGCAGCTGCTTGC < 41bp 0.772446446416316 0.555878704552906 0.26500326 0.11053696 prediction 0.433135483726821 Functional Loss - LIN52 ENSG00000205659 CDS Human protein_coding chr14:74665671 chr14:74665674 synonymous SNV . 0 24 hm5C_associated_SNPs_84411 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:74665637-74665684
64251 chr2 36668525 36668525 1 + C T UCEC 36668522 + 36668502 36668542 41 TGCTGTCCCTTACCCAGCCGCTGCGTGTGCAACCCCGCAGG TGCTGTCCCTTACCCAGCCGCTGTGTGTGCAACCCCGCAGG < 41bp 0.717908840198395 0.501341815941332 0.3181209 0.25226957 prediction 0.433134048514124 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668522 chr2:36668525 synonymous SNV . 0 24 hm5C_associated_SNPs_84412 0 0 2 PPIG POSTAR2 ENCODE chr2:36668471-36668572
64251 chr19 11891967 11891967 1 + G A LUSC 11891964 + 11891944 11891984 41 AATACATGAAAGAATTCACACTGGGGAGAGACCCTATAAAT AATACATGAAAGAATTCACACTGAGGAGAGACCCTATAAAT < 41bp 0.760095496937411 0.543530751994124 0.09522104 0.011060804 prediction 0.433129489886575 Functional Loss - ZNF441 ENSG00000197044 CDS Human protein_coding chr19:11891964 chr19:11891967 nonsynonymous SNV 0.034 2 24 hm5C_associated_SNPs_84413 0 0 1 DROSHA POSTAR2 ENCODE chr19:11891934-11891990
64251 chr12 132394355 132394355 1 + G A rs140317597 132394352 + 132394332 132394372 41 CAGGACCTGCGCCTGTTCTACGAGAAGAACAAGACGTTGGT CAGGACCTGCGCCTGTTCTACGAAAAGAACAAGACGTTGGT < 41bp 0.716561357934457 0.470116211256283 0.5510765 0.2698396 prediction 0.433122715868913 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132394352 chr12:132394355 synonymous SNV . 0 24 hm5C_associated_SNPs_84415 0 0 2 DDX24 POSTAR2 ENCODE chr12:132394324-132394379
64251 chr2 242285599 242285599 1 + C T SKCM 242285597 + 242285577 242285617 41 TCAGCACCCACATGCAGGATCTCCAGGAGGTGACCCAGGAC TCAGCACCCACATGCAGGATCTTCAGGAGGTGACCCAGGAC < 41bp 0.716554587172831 0.411770977207802 0.9406378 0.25040895 prediction 0.433109174345662 Functional Loss - SEPT2 ENSG00000168385 CDS Human protein_coding chr2:242285597 chr2:242285599 synonymous SNV . 0 23 hm5C_associated_SNPs_84419 0 0 19 U2AF2 POSTAR2 GSE83923,CSM2221662 chr2:242285580-242285600
64251 chr2 120003224 120003224 1 + G A rs202182166 120003221 + 120003201 120003241 41 GGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGG GGCCACACGCCTGGTGGGCTCTGACTTCAAAGTGGTGGTGG < 41bp 0.805820051536398 0.58927392771749 0.13552403 0.052034795 prediction 0.433092247637817 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120003221 chr2:120003224 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_84423 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:120003220-120003240
64251 chr3 158523171 158523171 1 + G A UCEC 158523168 + 158523148 158523188 41 TAGGATATGCAAGTGAATACCACGAAATTCATGCTGCTGTA TAGGATATGCAAGTGAATACCACAAAATTCATGCTGCTGTA < 41bp 0.750229335935678 0.533686075576976 0.2833749 0.2021175 prediction 0.433086520717404 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158523168 chr3:158523171 synonymous SNV . 0 24 hm5C_associated_SNPs_84424 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:158523151-158523173
64251 chr14 24884150 24884150 1 + G T LUAD 24884148 + 24884128 24884168 41 CAGGGGCAGCTTCTCCCTACCTGGGCATCCCCTGGGATGGA CAGGGGCAGCTTCTCCCTACCTTGGCATCCCCTGGGATGGA < 41bp 0.71654222466145 0.362854240015836 0.3714472 0.045719087 prediction 0.433084449322899 Functional Loss - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884148 chr14:24884150 synonymous SNV . 0 23 hm5C_associated_SNPs_84426 0 0 2 XPO5 POSTAR2 ENCODE chr14:24884143-24884200
64251 chr14 24884151 24884151 1 + G A SKCM 24884148 + 24884128 24884168 41 CAGGGGCAGCTTCTCCCTACCTGGGCATCCCCTGGGATGGA CAGGGGCAGCTTCTCCCTACCTGAGCATCCCCTGGGATGGA < 41bp 0.71654222466145 0.461358272581464 0.3714472 0.19042212 prediction 0.433084449322899 Functional Loss - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884148 chr14:24884151 nonsynonymous SNV 0.281 2 24 hm5C_associated_SNPs_84427 0 0 2 XPO5 POSTAR2 ENCODE chr14:24884143-24884200
64251 chr19 12858229 12858229 1 + C T COAD 12858226 + 12858206 12858246 41 TAGGAGCAGACAACTTTCATCTGCGTATGCATTGCTGAGTT TAGGAGCAGACAACTTTCATCTGTGTATGCATTGCTGAGTT < 41bp 0.740662764536676 0.524121851387187 0.38837367 0.23364872 prediction 0.433081826298978 Functional Loss - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12858226 chr19:12858229 synonymous SNV . 0 24 hm5C_associated_SNPs_84428 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:12858223-12858244
64251 chr19 13051428 13051428 1 + G T LIHC 13051426 + 13051406 13051446 41 GACTGGGATGAAGAGATGGACGGAGAGTGGGAACCCCCAGT GACTGGGATGAAGAGATGGACGTAGAGTGGGAACCCCCAGT < 41bp 0.716540736953769 0.365545296521441 0.5142602 0.24835968 prediction 0.433081473907537 Functional Loss - CALR ENSG00000179218 CDS Human protein_coding chr19:13051426 chr19:13051428 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_84429 0 0 54 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:13051363-13051462
64251 chr10 104182697 104182697 1 + G T STAD 104182694 + 104182674 104182714 41 AGCCGCCGCTGCACCAGGCCCTGGTGCTGCTGCAGGATATG AGCCGCCGCTGCACCAGGCCCTGTTGCTGCTGCAGGATATG < 41bp 0.716526800373366 0.314979875427227 0.38916123 0.31581968 prediction 0.433053600746731 Functional Loss - FBXL15 ENSG00000107872 CDS Human protein_coding chr10:104182694 chr10:104182697 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84439 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:104182673-104182709
64251 chr15 41221694 41221694 1 + A C rs143694727 41221690 + 41221670 41221710 41 CGCCGCCCAGCCGTAGTCACCTGGATTACCTACAGCGGCAG CGCCGCCCAGCCGTAGTCACCTGGCTTACCTACAGCGGCAG < 41bp 0.905293526386239 0.688770931302275 0.87307495 0.8536926 prediction 0.433045190167929 Functional Loss - DLL4 ENSG00000128917 UTR5 Human protein_coding chr15:41221690 chr15:41221694 . . 0 25 hm5C_associated_SNPs_84442 0 0 1 DGCR8 POSTAR2 ENCODE chr15:41221688-41221697
64251 chr14 90450886 90450886 1 + G A rs34452707 90450883 + 90450863 90450903 41 ATGGTTGAGCCCCTTATACCCACGAATTGCTGATGGAACCC ATGGTTGAGCCCCTTATACCCACAAATTGCTGATGGAACCC < 41bp 0.775270329463 0.558747937853502 0.3033647 0.24658266 prediction 0.433044783218997 Functional Loss - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90450883 chr14:90450886 nonsynonymous SNV 0.405 1 24 hm5C_associated_SNPs_84443 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:90450882-90450903
64251 chr1 26508997 26508997 1 + C T rs2802347 26508995 + 26508975 26509015 41 GCCACGTGGCTGGGATCTGCCACAACATCCTGGTCTGCTGC GCCACGTGGCTGGGATCTGCCATAACATCCTGGTCTGCTGC < 41bp 0.850381666432063 0.633863849638745 0.32701573 0.16992441 prediction 0.433035633586636 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26508995 chr1:26508997 stopgain . 0 23 hm5C_associated_SNPs_84446 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:26508994-26509044
64251 chrX 84510638 84510638 1 + A C rs139906124 84510634 + 84510614 84510654 41 TGTGGTCCAAGATTGTGTTTCAGGAGTCGACTCTCCCACAA TGTGGTCCAAGATTGTGTTTCAGGCGTCGACTCTCCCACAA < 41bp 0.932563474404068 0.716045817021818 0.91817653 0.60760283 prediction 0.433035314764499 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84510634 chrX:84510638 synonymous SNV . 0 25 hm5C_associated_SNPs_84447 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:84510276-84510802
64251 chr3 12845062 12845062 1 + G A SKCM 12845059 + 12845039 12845079 41 CTGGACGAGGACAGCGAGCGCAAGGTGGTGAAGATGCTGCT CTGGACGAGGACAGCGAGCGCAAAGTGGTGAAGATGCTGCT < 41bp 0.716517461819453 0.470814636645675 0.9058506 0.49140128 prediction 0.433034923638906 Functional Loss - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12845059 chr3:12845062 synonymous SNV . 0 24 hm5C_associated_SNPs_84448 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:12845045-12845075
64251 chr7 128454895 128454895 1 + G T UCEC 128454892 + 128454872 128454912 41 AATGCTAATAAGAACATGAACAAGAATGCCAATGGGGTTAA AATGCTAATAAGAACATGAACAATAATGCCAATGGGGTTAA < 41bp 0.716516011635775 0.324497783049981 0.2546869 0.10946396 prediction 0.43303202327155 Functional Loss - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128454892 chr7:128454895 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_84450 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:128454889-128454916
64251 chr16 12136849 12136849 1 + G A UCEC 12136846 + 12136826 12136866 41 ACATCGCCTCAGACGTGGGCCGGGGTCGCGCCTGGCTGCGC ACATCGCCTCAGACGTGGGCCGGAGTCGCGCCTGGCTGCGC < 41bp 0.775576486739803 0.559060834759236 0.9043241 0.88932395 prediction 0.433031303961135 Functional Loss - SNX29 ENSG00000048471 CDS Human protein_coding chr16:12136846 chr16:12136849 nonsynonymous SNV 0.932 2 24 hm5C_associated_SNPs_84451 0 0 4 DDX24 POSTAR2 ENCODE chr16:12136794-12136857
64251 chr15 45694634 45694634 1 + C T LGG 45694632 + 45694612 45694652 41 GGTTCATCTGTGTGCGATGGCTCCGGACTCGGATCCCTTCC GGTTCATCTGTGTGCGATGGCTTCGGACTCGGATCCCTTCC < 41bp 0.798194636692356 0.58168678623541 0.23961675 0.25361913 prediction 0.433015700913892 Functional Loss - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45694632 chr15:45694634 nonsynonymous SNV 0.037 2 23 hm5C_associated_SNPs_84457 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:45694620-45694640
64251 chr17 38609376 38609376 1 + G A SKCM 38609373 + 38609353 38609393 41 ATGAAGGTCAATGGGGCGCCCCGGGAGGATGCCCGGCCTGT ATGAAGGTCAATGGGGCGCCCCGAGAGGATGCCCGGCCTGT < 41bp 0.716505201831749 0.461029400531132 0.90902376 0.5746371 prediction 0.433010403663499 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38609373 chr17:38609376 synonymous SNV . 0 24 hm5C_associated_SNPs_84459 0 0 1 SND1 POSTAR2 ENCODE chr17:38609370-38609392
64251 chr7 36194739 36194739 1 + A C BLCA 36194738 + 36194718 36194758 41 GGCTGGCCACCTGGAACTTGCAGGGCTGTTCCGTGGAGAAG GGCTGGCCACCTGGAACTTGCCGGGCTGTTCCGTGGAGAAG < 41bp 0.833661181872941 0.617162161856602 0.9282001 0.9041749 prediction 0.432998040032677 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194738 chr7:36194739 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_84462 0 0 3 GRWD1 POSTAR2 ENCODE chr7:36194739-36194804
64251 chr5 153796577 153796577 1 + T C rs375900060 153796576 + 153796556 153796596 41 CCCCCAGGGTCTGGCACTCACTGCAGACTTCCTCTTTCAAG CCCCCAGGGTCTGGCACTCACCGCAGACTTCCTCTTTCAAG < 41bp 0.748030640740276 0.531535311770761 0.2665751 0.21569702 prediction 0.432990657939031 Functional Loss - SAP30L-AS1 ENSG00000245275 ncRNA_intronic Human antisense chr5:153796576 chr5:153796577 . . 0 22 hm5C_associated_SNPs_84463 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:153796569-153796596
64251 chr1 150478082 150478082 1 + C T LUSC 150478079 + 150478059 150478099 41 TGTTGCAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTC TGTTGCAGGCACAGCAGAGCCTGTGGGCTGCAGGACTGGTC < 41bp 0.752512165410476 0.536017641522685 0.20372304 0.1677123 prediction 0.432989047775582 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150478079 chr1:150478082 nonsynonymous SNV 0.016 2 24 hm5C_associated_SNPs_84464 0 0 3 BUD13 POSTAR2 ENCODE chr1:150478032-150478087
64251 chr11 47183083 47183083 1 + G A COAD 47183080 + 47183060 47183100 41 AGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCCCGGGTTG AGAGGCCAGTTGCCTGCCTTCCCAGACCCCTCCCCGGGTTG < 41bp 0.71648266723024 0.464284686317785 0.5043489 0.27743298 prediction 0.43296533446048 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47183080 chr11:47183083 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_84470 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47183072-47183131
64251 chr4 113574350 113574350 1 + G T UCEC 113574348 + 113574328 113574368 41 AGCAGTAATAAATGCCTATACAGAAATTAACAAGAAACACT AGCAGTAATAAATGCCTATACATAAATTAACAAGAAACACT < 41bp 0.716481718870021 0.394573382835199 0.16836616 0.10499123 prediction 0.432963437740043 Functional Loss - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113574348 chr4:113574350 stopgain 0.085 0 23 hm5C_associated_SNPs_84471 0 0 2 DDX6 POSTAR2 ENCODE chr4:113574303-113574391
64251 chr15 57745940 57745940 1 + A C COAD 57745936 + 57745916 57745956 41 AGACTGAGATCAGGGATCTCCAGGACCAGCTCTCAGAAATG AGACTGAGATCAGGGATCTCCAGGCCCAGCTCTCAGAAATG < 41bp 0.716480715191746 0.297797914067371 0.75176716 0.8601968 prediction 0.432961430383491 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57745936 chr15:57745940 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_84473 0 0 4 GRWD1 POSTAR2 ENCODE chr15:57745879-57745968
64251 chr12 54338938 54338938 1 + G A UCEC 54338935 + 54338915 54338955 41 CGCCGGCGCATCTCCGCCACCACGAACCTCTCTGAGCGCCA CGCCGGCGCATCTCCGCCACCACAAACCTCTCTGAGCGCCA < 41bp 0.778560189585813 0.562088653176179 0.14567411 0.08151439 prediction 0.432943072819268 Functional Loss - HOXC13 ENSG00000123364 CDS Human protein_coding chr12:54338935 chr12:54338938 synonymous SNV . 0 24 hm5C_associated_SNPs_84478 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:54338938-54338939
64251 chr5 68531270 68531270 1 + C T COAD 68531268 + 68531248 68531288 41 AAGAACACCAACCAAATTGTCGCCATTAAGAAAGTGAGTTA AAGAACACCAACCAAATTGTCGTCATTAAGAAAGTGAGTTA < 41bp 0.749167263783743 0.532699375716145 0.09024122 0.15427476 prediction 0.432935776135195 Functional Loss - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68531268 chr5:68531270 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_84479 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:68531235-68531271
64251 chr10 6263667 6263667 1 + C T BLCA 6263664 + 6263644 6263684 41 CCTACCCTGAGGAGTATGCGCTGCGGGAGCAGGACAAGTAC CCTACCCTGAGGAGTATGCGCTGTGGGAGCAGGACAAGTAC < 41bp 0.716450166849185 0.495603819736572 0.6112963 0.5492814 prediction 0.432900333698369 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6263664 chr10:6263667 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_84489 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:6263658-6263681
64251 chr16 89986144 89986144 1 + C T rs1805008 89986142 + 89986122 89986162 41 CCACAGCATCGTGACCCTGCCGCGGGCGCGGCGAGCCGTTG CCACAGCATCGTGACCCTGCCGTGGGCGCGGCGAGCCGTTG < 41bp 0.787983108082798 0.571535974170851 0.7120402 0.51114523 prediction 0.432894267823896 Functional Loss - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89986142 chr16:89986144 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_84490 6 1 1 RTCB POSTAR2 GSE38201,GSM936508 chr16:89986119-89986150
64251 chr16 20837186 20837186 1 + G A UCEC 20837183 + 20837163 20837203 41 ATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG ATCCAAGGGGAGAGAGCTAACACACATCTCACTGGTTGCTG < 41bp 0.772975132784731 0.556531211805906 0.38661793 0.17665216 prediction 0.43288784195765 Functional Loss - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20837183 chr16:20837186 nonsynonymous SNV 0.969 3 24 hm5C_associated_SNPs_84492 0 0 5 HNRNPD POSTAR2 GSE52971,GSM1279665 chr16:20837160-20837200
64251 chr10 112266825 112266825 1 + A T LUAD 112266821 + 112266801 112266841 41 CGACGGACCTCCGAGGCCTGCGCGACCCACCTACACTACAA CGACGGACCTCCGAGGCCTGCGCGTCCCACCTACACTACAA < 41bp 0.90522381738413 0.688780364192013 0.22703865 0.15828612 prediction 0.432886906384233 Functional Loss - DUSP5 ENSG00000138166 CDS Human protein_coding chr10:112266821 chr10:112266825 nonsynonymous SNV 0.900 1 25 hm5C_associated_SNPs_84493 0 0 1 EWSR1 POSTAR2 SRX029343 chr10:112266824-112266852
64251 chr12 112915480 112915480 1 + C T UCEC 112915478 + 112915458 112915498 41 ATCATACCAGGGTTGTCCTACACGATGGTGATCCCAATGAG ATCATACCAGGGTTGTCCTACATGATGGTGATCCCAATGAG < 41bp 0.716434782248272 0.41618585375296 0.2483449 0.36651427 prediction 0.432869564496544 Functional Loss - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112915478 chr12:112915480 synonymous SNV . 0 23 hm5C_associated_SNPs_84497 2 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:112915460-112915480
64251 chr7 2598810 2598810 1 + G C rs192943823 2598806 + 2598786 2598826 41 CCTGAGGGGCGGCCGGGCAGCGCCGCCACCATGTTCCTGGG CCTGAGGGGCGGCCGGGCAGCGCCCCCACCATGTTCCTGGG < 41bp 0.719354014277791 0.502921642009727 0.17537344 0.060498327 prediction 0.432864744536128 Functional Loss - IQCE ENSG00000106012 UTR5 Human protein_coding chr7:2598806 chr7:2598810 . . 0 25 hm5C_associated_SNPs_84499 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:2598789-2598831
64251 chr17 60522259 60522259 1 + C T rs147656413 60522256 + 60522236 60522276 41 AACCTGGCGGGATGATGCTTCTGCGAGATTACGGCCGCTAT AACCTGGCGGGATGATGCTTCTGTGAGATTACGGCCGCTAT < 41bp 0.757966791052361 0.541539018587939 0.22316977 0.14185262 prediction 0.432855544928842 Functional Loss - METTL2A ENSG00000087995 CDS Human protein_coding chr17:60522256 chr17:60522259 stopgain 0.997 1 24 hm5C_associated_SNPs_84502 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr17:60522236-60522259
64251 chr4 140375467 140375467 1 + G C PRAD 140375466 + 140375446 140375486 41 ATCTTCAAGATAATCGTGATCGGCGACTCCAATGTGGGCAA ATCTTCAAGATAATCGTGATCCGCGACTCCAATGTGGGCAA < 41bp 0.878446956162668 0.66202234885271 0.607946 0.10986021 prediction 0.432849214619916 Functional Loss - RAB33B ENSG00000172007 CDS Human protein_coding chr4:140375466 chr4:140375467 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_84504 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr4:140375453-140375476
64251 chr9 117002759 117002759 1 + G A HNSC 117002756 + 117002736 117002776 41 TGCCGGGACCCCGTGGGCAGCTGGGGCCCGAGGTGAGACTG TGCCGGGACCCCGTGGGCAGCTGAGGCCCGAGGTGAGACTG < 41bp 0.776139279082956 0.559716017697953 0.9071478 0.8617282 prediction 0.432846522770006 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117002756 chr9:117002759 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_84505 0 0 8 BUD13 POSTAR2 ENCODE chr9:117002713-117002764
64251 chr19 49699765 49699765 1 + G T UCEC 49699763 + 49699743 49699783 41 TCGGGCCGTCCGGGTTGCTGCGGGGGCCGCTGCGGGGGGCG TCGGGCCGTCCGGGTTGCTGCGTGGGCCGCTGCGGGGGGCG < 41bp 0.912422361626906 0.696001715002188 0.92932427 0.79676366 prediction 0.432841293249436 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49699763 chr19:49699765 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_84506 0 0 1 DDX24 POSTAR2 ENCODE chr19:49699697-49699769
64251 chr11 61897398 61897398 1 + G A UCEC 61897395 + 61897375 61897415 41 CGTGCTGCGGCTGCAGCTGCCGCGGCTACCATGGCATTGGC CGTGCTGCGGCTGCAGCTGCCGCAGCTACCATGGCATTGGC < 41bp 0.807728904507798 0.591309431979369 0.9008682 0.60539377 prediction 0.432838945056858 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897395 chr11:61897398 synonymous SNV . 0 24 hm5C_associated_SNPs_84507 0 0 1 RBM15 POSTAR2 ENCODE chr11:61897333-61897401
64251 chr9 108120705 108120705 1 + G A UCEC 108120702 + 108120682 108120722 41 TCTTAACGATTCTGGTCATACTCGGTTCACTTGGTAAGCTA TCTTAACGATTCTGGTCATACTCAGTTCACTTGGTAAGCTA < 41bp 0.771009488520974 0.554596443931639 0.10076591 0.11896682 prediction 0.432826089178669 Functional Loss - SLC44A1 ENSG00000070214 CDS Human protein_coding chr9:108120702 chr9:108120705 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_84511 0 0 1 LIN28B POSTAR2 ENCODE chr9:108120640-108120716
64251 chr22 45121159 45121159 1 + C T UCEC 45121157 + 45121137 45121177 41 ACAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGGTAGG ACAGAGCTGGGGTCCTTCTTCATGGAGTACCTGCAGGTAGG < 41bp 0.827490515360933 0.611081438384864 0.82530516 0.5975268 prediction 0.43281815395214 Functional Loss - PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45121157 chr22:45121159 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_84512 0 0 3 PPIG POSTAR2 ENCODE chr22:45121118-45121179
64251 chr3 9726588 9726588 1 + C T rs183134138 9726586 + 9726566 9726606 41 TTCCAGGATGGGCTCATCCACACGTCCCTGAAGCCCACTGA TTCCAGGATGGGCTCATCCACATGTCCCTGAAGCCCACTGA < 41bp 0.716407458129495 0.451400903665754 0.2170623 0.21364278 prediction 0.432814916258991 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9726586 chr3:9726588 nonsynonymous SNV 0.884 3 23 hm5C_associated_SNPs_84514 1 0 1 PPIG POSTAR2 ENCODE chr3:9726578-9726664
64251 chr3 66436641 66436641 1 - G A UCEC 66436644 - 66436624 66436664 41 GGACATCCGGTTTACATGCTCAGCAGCCAGCAGCAGCAGCT GGACATCCGGTTTACATGCTCAGTAGCCAGCAGCAGCAGCT < 41bp 0.716406876320659 0.490398482421017 0.7439934 0.7256173 prediction 0.432813752641318 Functional Loss - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66436644 chr3:66436641 nonsynonymous SNV 0.977 3 24 hm5C_associated_SNPs_84516 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:66436625-66436654
64251 chr11 119206667 119206667 1 + C T STAD 119206665 + 119206645 119206685 41 AGAGGATGTCATGCGGCTCTCTCGCCTAGCACTGGGCTCAG AGAGGATGTCATGCGGCTCTCTTGCCTAGCACTGGGCTCAG < 41bp 0.802004264886863 0.585598533358576 0.32780844 0.11445564 prediction 0.432811463056575 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206665 chr11:119206667 nonsynonymous SNV 0.959 2 23 hm5C_associated_SNPs_84518 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:119206655-119206683
64251 chr15 34517327 34517327 1 + G A UCEC 34517324 + 34517304 34517344 41 GCAGCTGTTGCCATGACGGCCCAGGGGGGCCTGGTGGCTAA GCAGCTGTTGCCATGACGGCCCAAGGGGGCCTGGTGGCTAA < 41bp 0.776832240314541 0.560430677713537 0.83252734 0.30720228 prediction 0.432803125202007 Functional Loss - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34517324 chr15:34517327 synonymous SNV . 0 24 hm5C_associated_SNPs_84520 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr15:34517296-34517327
64251 chr15 85383636 85383636 1 + C T STAD 85383634 + 85383614 85383654 41 CCAGCCCAGAGGCAGGGCTGCACGGGGGCCTGGGTCCTCTG CCAGCCCAGAGGCAGGGCTGCATGGGGGCCTGGGTCCTCTG < 41bp 0.71639464263195 0.466077499026403 0.8622791 0.8110487 prediction 0.432789285263899 Functional Loss - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85383634 chr15:85383636 nonsynonymous SNV 0.184 2 23 hm5C_associated_SNPs_84523 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85383634-85383656
64251 chr17 40720917 40720917 1 + C T UCEC 40720914 + 40720894 40720934 41 AGTCCTACAAAGACCGGCGGCGGCGCGCACACACTCAGGCT AGTCCTACAAAGACCGGCGGCGGTGCGCACACACTCAGGCT < 41bp 0.721127010147814 0.504732872785914 0.15803331 0.1584495 prediction 0.432788274723799 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40720914 chr17:40720917 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_84524 0 0 1 UCHL5 POSTAR2 ENCODE chr17:40720858-40720933
64251 chr7 27831685 27831685 1 + C T BLCA 27831683 + 27831663 27831703 41 AGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTC AGAGGAACAGGTTCAGGCAACTTGGCAAGAAGTTGTCTTTC < 41bp 0.716393183851834 0.424766813202098 0.68855786 0.6865114 prediction 0.432786367703668 Functional Loss - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27831683 chr7:27831685 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_84527 0 0 6 FASTKD2 POSTAR2 ENCODE chr7:27831622-27831772
64251 chr7 27831686 27831686 1 + G A STAD 27831683 + 27831663 27831703 41 AGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTC AGAGGAACAGGTTCAGGCAACTCAGCAAGAAGTTGTCTTTC < 41bp 0.716393183851834 0.479664446776828 0.68855786 0.570613 prediction 0.432786367703668 Functional Loss - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27831683 chr7:27831686 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_84528 0 0 6 FASTKD2 POSTAR2 ENCODE chr7:27831622-27831772
64251 chr15 74771488 74771488 1 + G A rs2099593 74771485 + 74771465 74771505 41 AGAATGACGCCATGGGCCCTCGCGGTGAGTGTTACAGCTCT AGAATGACGCCATGGGCCCTCGCAGTGAGTGTTACAGCTCT < 41bp 0.793409196807141 0.577024583093332 0.56496495 0.33735138 prediction 0.432769227427618 Functional Loss - UBL7-AS1 ENSG00000247240;ENSG00000260103 ncRNA_exonic Human other chr15:74771485 chr15:74771488 . . 0 24 hm5C_associated_SNPs_84532 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:74771474-74771501
64251 chr19 36036644 36036644 1 + G A BLCA 36036641 + 36036621 36036661 41 CGGGACCGGGCGGCCGGCATCATGACCCTGTTTCACTTCGG CGGGACCGGGCGGCCGGCATCATAACCCTGTTTCACTTCGG < 41bp 0.728656552436089 0.512274287353123 0.44623193 0.3400955 prediction 0.432764530165932 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36036641 chr19:36036644 nonsynonymous SNV 0.984 2 24 hm5C_associated_SNPs_84534 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:36036520-36036680
64251 chr11 60703479 60703479 1 + C T STAD 60703477 + 60703457 60703497 41 CTGAGGAGCAGGGTGCCCAGCTCGGGGTGGTGGTGAGTGGG CTGAGGAGCAGGGTGCCCAGCTTGGGGTGGTGGTGAGTGGG < 41bp 0.777082531139228 0.560700665670328 0.41880408 0.22955841 prediction 0.432763730937801 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703477 chr11:60703479 synonymous SNV . 0 23 hm5C_associated_SNPs_84536 0 0 2 PPIG POSTAR2 ENCODE chr11:60703470-60703515
64251 chr15 40293312 40293312 1 + C T STAD 40293309 + 40293289 40293329 41 AGTCAGAGCTGCATGAAGTGCTGCACCACACGCTGACCAAC AGTCAGAGCTGCATGAAGTGCTGTACCACACGCTGACCAAC < 41bp 0.739465689998263 0.523086024541981 0.13819653 0.15407151 prediction 0.432759330912563 Functional Loss - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40293309 chr15:40293312 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84538 0 0 1 FXR2 POSTAR2 ENCODE chr15:40293283-40293418
64251 chr17 41004836 41004836 1 + G A LUSC 41004833 + 41004813 41004853 41 ATAGAAATACGATTCTATGCCACGGGCTACATCAGCTCGGC ATAGAAATACGATTCTATGCCACAGGCTACATCAGCTCGGC < 41bp 0.804971102199689 0.588603036077595 0.2171832 0.11612764 prediction 0.432736132244189 Functional Loss - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41004833 chr17:41004836 synonymous SNV . 0 24 hm5C_associated_SNPs_84542 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:41004833-41004871
64251 chr17 6348675 6348675 1 + T C LGG 6348674 + 6348654 6348694 41 CAGAGCCAGGTCAGCAGGGCCTCCAGGCTGCAGCTCGCTCA CAGAGCCAGGTCAGCAGGGCCCCCAGGCTGCAGCTCGCTCA < 41bp 0.851934407279803 0.635567636924862 0.93155247 0.28558993 prediction 0.432733540709883 Functional Loss - PIMREG ENSG00000129195 CDS Human protein_coding chr17:6348674 chr17:6348675 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_84544 0 0 1 SF3B1 POSTAR2 ENCODE chr17:6348645-6348687
64251 chr9 132899633 132899633 1 + G A rs150623130 132899630 + 132899610 132899650 41 AGCGTTGGGTGTTCAGATTCCACGCGTATGTCTGGGCTCAC AGCGTTGGGTGTTCAGATTCCACACGTATGTCTGGGCTCAC < 41bp 0.716362478392691 0.481540276905529 0.3942304 0.34079877 prediction 0.432724956785381 Functional Loss - GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132899630 chr9:132899633 . . 0 24 hm5C_associated_SNPs_84548 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:132899603-132899643
64251 chr10 70509354 70509354 1 + C T SKCM 70509352 + 70509332 70509372 41 GAAACGTTCCCGGGAAAGATCTCCACGAAGAGAGCGAGAGC GAAACGTTCCCGGGAAAGATCTTCACGAAGAGAGCGAGAGC < 41bp 0.86590872603955 0.649550717624615 0.940981 0.050764382 prediction 0.432716016829871 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70509352 chr10:70509354 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_84549 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:70509349-70509368
64251 chr4 5754670 5754670 1 + C T LUSC 5754668 + 5754648 5754688 41 GCCGGCTGGCTGCCATCTCCCACGGCCTGGAGCTGCTGGCT GCCGGCTGGCTGCCATCTCCCATGGCCTGGAGCTGCTGGCT < 41bp 0.809623884208246 0.593273958519252 0.7268968 0.8621814 prediction 0.432699851377989 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5754668 chr4:5754670 synonymous SNV . 0 23 hm5C_associated_SNPs_84557 0 0 2 EIF3H POSTAR2 ENCODE chr4:5754642-5754754
64251 chr20 377082 377082 1 + C T BRCA 377080 + 377060 377100 41 TGCTCTTCGGCAAGATCCGCCGCGGGGCCTACGCCTTGCCT TGCTCTTCGGCAAGATCCGCCGTGGGGCCTACGCCTTGCCT < 41bp 0.716345806243822 0.46551575864392 0.87829775 0.7888969 prediction 0.432691612487645 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377080 chr20:377082 synonymous SNV . 0 23 hm5C_associated_SNPs_84559 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr20:377073-377092
64251 chr6 43607788 43607788 1 + G T LUSC 43607785 + 43607765 43607805 41 AGATGCTGAAGAAGAAACCTCGGGCCACCACTGAGGTGAGC AGATGCTGAAGAAGAAACCTCGGTCCACCACTGAGGTGAGC < 41bp 0.716339168070388 0.313638236915133 0.589748 0.20882854 prediction 0.432678336140777 Functional Loss - MAD2L1BP ENSG00000124688 CDS Human protein_coding chr6:43607785 chr6:43607788 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_84562 0 0 5 BUD13 POSTAR2 ENCODE chr6:43607722-43607811
64251 chrX 153001904 153001904 1 + C T BRCA 153001902 + 153001882 153001922 41 GCCCAGGGAGCTAGAGGACGCTCAGGCGGGGTCTGGGACCA GCCCAGGGAGCTAGAGGACGCTTAGGCGGGGTCTGGGACCA < 41bp 0.716339162781884 0.453333356791645 0.34050512 0.5159747 prediction 0.432678325563768 Functional Loss - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153001902 chrX:153001904 stopgain 0.524 0 23 hm5C_associated_SNPs_84563 0 0 2 BUD13 POSTAR2 ENCODE chrX:153001876-153001920
64251 chr19 10394882 10394882 1 + T C LUSC 10394881 + 10394861 10394901 41 ACCTATGGCAACGACTCCTTCTCGGCCAAGGCCTCAGTCAG ACCTATGGCAACGACTCCTTCCCGGCCAAGGCCTCAGTCAG < 41bp 0.817045375797846 0.600710138324493 0.12363848 0.13312334 prediction 0.432670474946705 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394881 chr19:10394882 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_84566 0 0 2 DHX30 POSTAR2 ENCODE chr19:10394840-10394898
64251 chr19 13059171 13059171 1 + G T rs200506311 13059169 + 13059149 13059189 41 GACGTCCCCAGAGTCTGTGTCAGGGTAAGGCGGGGGCAGCA GACGTCCCCAGAGTCTGTGTCATGGTAAGGCGGGGGCAGCA < 41bp 0.916678376753454 0.70034545534104 0.94686866 0.7643478 prediction 0.432665842824829 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059169 chr19:13059171 nonsynonymous SNV 0.846 3 23 hm5C_associated_SNPs_84568 0 0 2 PRPF8 POSTAR2 ENCODE chr19:13059155-13059191
64251 chr2 109411032 109411032 1 + G A UCEC 109411029 + 109411009 109411049 41 TAATACGACCTCATCGAGACCTCGGACTGAGTGTTGTAGTG TAATACGACCTCATCGAGACCTCAGACTGAGTGTTGTAGTG < 41bp 0.769224949265744 0.552893327603416 0.06757495 0.02173677 prediction 0.432663243324656 Functional Loss - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109411029 chr2:109411032 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_84569 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:109411021-109411035
64251 chr14 93694462 93694462 1 + G A rs17128946 93694459 + 93694439 93694479 41 GGAAGAGATTACAAACAAGGCCCGAGGCTGCACGAATGATG GGAAGAGATTACAAACAAGGCCCAAGGCTGCACGAATGATG < 41bp 0.75539620045343 0.539066086241132 0.04620889 0.03195417 prediction 0.432660228424596 Functional Loss - UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93694459 chr14:93694462 . . 0 24 hm5C_associated_SNPs_84570 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:93694410-93694488
64251 chr18 48593467 48593467 1 + G T BLCA 48593464 + 48593444 48593484 41 GTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACAGAGTTA GTCAGGTGCCTTAGTGACCACGCTGTCTTTGTACAGAGTTA < 41bp 0.716329096160188 0.329232642521067 0.42100486 0.15109476 prediction 0.432658192320377 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48593464 chr18:48593467 synonymous SNV . 0 24 hm5C_associated_SNPs_84572 0 0 1 PPIG POSTAR2 ENCODE chr18:48593397-48593485
64251 chr18 48593466 48593466 1 + C T LUAD 48593464 + 48593444 48593484 41 GTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACAGAGTTA GTCAGGTGCCTTAGTGACCACGTGGTCTTTGTACAGAGTTA < 41bp 0.716329096160188 0.443551504022006 0.42100486 0.5363836 prediction 0.432658192320377 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48593464 chr18:48593466 nonsynonymous SNV 0.658 5 23 hm5C_associated_SNPs_84573 1 0 1 PPIG POSTAR2 ENCODE chr18:48593397-48593485
64251 chr3 193355804 193355804 1 + C T UCEC 193355802 + 193355782 193355822 41 GTTGGAAATGATTGCCCAAGCTCGAATATTCCCAAGAGGAT GTTGGAAATGATTGCCCAAGCTTGAATATTCCCAAGAGGAT < 41bp 0.865462120408082 0.649135498510499 0.064825624 0.055112243 prediction 0.432653243795167 Functional Loss - OPA1 ENSG00000198836 CDS Human protein_coding chr3:193355802 chr3:193355804 stopgain 0.954 1 23 hm5C_associated_SNPs_84575 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr3:193355791-193355826
64251 chr22 35812362 35812362 1 + G A UCEC 35812359 + 35812339 35812379 41 AAGATGACCGTGTGGCAATCCACGAAGCCATGGAGCAGCAG AAGATGACCGTGTGGCAATCCACAAAGCCATGGAGCAGCAG < 41bp 0.800097763346964 0.583781678300668 0.2544539 0.28183407 prediction 0.432632170092592 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35812359 chr22:35812362 nonsynonymous SNV 0.892 4 24 hm5C_associated_SNPs_84579 0 0 10 NOP58 POSTAR2 GSE43666,GSM1067862 chr22:35812353-35812391
64251 chr9 38396669 38396669 1 + C T STAD 38396667 + 38396647 38396687 41 AGCATGCCGTGGAGCAGTGCCACGAAGCCCTGTTCTTCAAC AGCATGCCGTGGAGCAGTGCCATGAAGCCCTGTTCTTCAAC < 41bp 0.854053628394787 0.637737875641305 0.07725096 0.0930599 prediction 0.432631505506962 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396667 chr9:38396669 synonymous SNV . 0 23 hm5C_associated_SNPs_84580 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr9:38396642-38396670
64251 chr7 99956644 99956644 1 + G A SKCM 99956641 + 99956621 99956661 41 TGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCAGCA TGCCGAGTCGAGCTGGACACCCGAAGATCAGGGAGGCAGCA < 41bp 0.781650476462142 0.565336203689523 0.92954224 0.9076953 prediction 0.432628545545239 Functional Loss - PILRB ENSG00000121716 CDS Human protein_coding chr7:99956641 chr7:99956644 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_84581 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:99956616-99956657
64251 chr9 137623932 137623932 1 + G T HNSC 137623929 + 137623909 137623949 41 ACCCCCAGATTGGAGGACCTCGGGGCGAGAAAGGCCAAAAG ACCCCCAGATTGGAGGACCTCGGTGCGAGAAAGGCCAAAAG < 41bp 0.716313231567128 0.335797021969242 0.92730284 0.4134422 prediction 0.432626463134255 Functional Loss - COL5A1 ENSG00000130635 CDS Human protein_coding chr9:137623929 chr9:137623932 nonsynonymous SNV 0.856 4 24 hm5C_associated_SNPs_84582 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:137623920-137623940
64251 chr8 98741233 98741233 1 + G A rs146341861 98741230 + 98741210 98741250 41 GCTCACTTCAGCCTGGAACTCCCGGGCTCGAGCTATATTCT GCTCACTTCAGCCTGGAACTCCCAGGCTCGAGCTATATTCT < 41bp 0.722973729188822 0.506664794710524 0.4595744 0.2511205 prediction 0.432617868956595 Functional Loss - MTDH ENSG00000147649 downstream Human protein_coding chr8:98741230 chr8:98741233 . . 0 24 hm5C_associated_SNPs_84585 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:98741211-98741233
64251 chr6 26104299 26104299 1 + G C OV 26104298 + 26104278 26104318 41 ATTCGCCGTTTGGCTCGGCGCGGTGGCGTCAAGCGCATTTC ATTCGCCGTTTGGCTCGGCGCCGTGGCGTCAAGCGCATTTC < 41bp 0.883170217238333 0.66686769554572 0.34317023 0.18420136 prediction 0.432605043385227 Functional Loss - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104298 chr6:26104299 nonsynonymous SNV 0.007 2 22 hm5C_associated_SNPs_84587 0 0 39 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:26104160-26104340
64251 chr11 67075131 67075131 1 + C T rs57238619 67075128 + 67075108 67075148 41 CACTACCAGGAGAGACTGAACTCCGAACAGAGCTGCCTCAA CACTACCAGGAGAGACTGAACTCTGAACAGAGCTGCCTCAA < 41bp 0.722543194130037 0.506244134495548 0.6281306 0.3992193 prediction 0.432598119268979 Functional Loss - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075128 chr11:67075131 synonymous SNV . 0 24 hm5C_associated_SNPs_84589 0 0 1 XPO5 POSTAR2 ENCODE chr11:67075088-67075141
64251 chr19 30936384 30936384 1 + G A PRAD 30936381 + 30936361 30936401 41 CCGAGTGCCCCGACTGCGGCCGGGTGTTCCGCACTTACCAC CCGAGTGCCCCGACTGCGGCCGGATGTTCCGCACTTACCAC < 41bp 0.71629872285725 0.466056383741923 0.9176538 0.90936923 prediction 0.432597445714499 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936381 chr19:30936384 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_84590 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr19:30936367-30936391
64251 chr9 130420676 130420676 1 + C T UCEC 130420674 + 130420654 130420694 41 TTGTGGAAGATATCAATAAGCGCAGAGAGCCGCTCCCCAGC TTGTGGAAGATATCAATAAGCGTAGAGAGCCGCTCCCCAGC < 41bp 0.716298405747538 0.437565976264161 0.24956322 0.23729312 prediction 0.432596811495075 Functional Loss - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130420674 chr9:130420676 synonymous SNV . 0 23 hm5C_associated_SNPs_84591 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:130420654-130420756
64251 chr19 49979749 49979749 1 + G C BLCA 49979748 + 49979728 49979768 41 ATGGAGCGGCTCAAGACTGTCGCTGGGTCCAAGATGCAAGG ATGGAGCGGCTCAAGACTGTCCCTGGGTCCAAGATGCAAGG < 41bp 0.716294953827896 0.393824362168617 0.11651486 0.11168188 prediction 0.432589907655792 Functional Loss - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49979748 chr19:49979749 nonsynonymous SNV 0.829 2 22 hm5C_associated_SNPs_84596 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:49979744-49979782
64251 chr17 1628060 1628060 1 + G A rs148119667 1628057 + 1628037 1628077 41 CAGCCTCTGCCCCGCCGCGCCCGGAGCGCAGGACCCGCGGA CAGCCTCTGCCCCGCCGCGCCCGAAGCGCAGGACCCGCGGA < 41bp 0.716289087203042 0.483164820501276 0.7513934 0.43690246 prediction 0.432578174406085 Functional Loss - WDR81 ENSG00000167716 UTR5 Human protein_coding chr17:1628057 chr17:1628060 . . 0 24 hm5C_associated_SNPs_84601 0 0 1 EIF3H POSTAR2 ENCODE chr17:1628031-1628070
64251 chr7 141443499 141443499 1 + T C rs78598246 141443498 + 141443478 141443518 41 GGGATAGTGAAGTTTACCAACTGGGTGAGTACAAAAGACTG GGGATAGTGAAGTTTACCAACCGGGTGAGTACAAAAGACTG < 41bp 0.780485330589833 0.564199617209865 0.25982362 0.38036588 prediction 0.432571426759937 Functional Loss - SSBP1 ENSG00000106028 CDS Human protein_coding chr7:141443498 chr7:141443499 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_84603 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141443424-141443500
64251 chr6 148840834 148840834 1 + C T SKCM 148840831 + 148840811 148840851 41 TCTCTCACCACGTCTCCATCCTCCAGCAGCCTGGACACCTG TCTCTCACCACGTCTCCATCCTCTAGCAGCCTGGACACCTG < 41bp 0.79894330814313 0.582658069814258 0.9487757 0.9273024 prediction 0.432570476657744 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148840831 chr6:148840834 synonymous SNV . 0 24 hm5C_associated_SNPs_84605 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:148840808-148840842
64251 chr8 104053095 104053095 1 + G T LUAD 104053093 + 104053073 104053113 41 GTTCTGGCTTATATCTGCTCCTGGGGAGAAAACCTGTCAGC GTTCTGGCTTATATCTGCTCCTTGGGAGAAAACCTGTCAGC < 41bp 0.716284345849035 0.385210967286069 0.7584276 0.1653271 prediction 0.43256869169807 Functional Loss - ATP6V1C1 ENSG00000155097 CDS Human protein_coding chr8:104053093 chr8:104053095 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_84607 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr8:104053067-104053112
64251 chr15 43690300 43690300 1 + T C rs999025 43690299 + 43690279 43690319 41 TCCCCGGGAAGCCCCTGCATCTGGCTGGGCAGCCCTAGGTC TCCCCGGGAAGCCCCTGCATCCGGCTGGGCAGCCCTAGGTC < 41bp 0.820633542851538 0.604349466070921 0.28508958 0.33785182 prediction 0.432568153561236 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43690299 chr15:43690300 synonymous SNV . 0 22 hm5C_associated_SNPs_84608 0 0 4 U2AF1 POSTAR2 ENCODE chr15:43690232-43690325
64251 chr17 8170198 8170198 1 + G A COAD 8170195 + 8170175 8170215 41 CTGGAGCTGGGCCACACAGGCGAGGCCGGGCCCCACGCCAT CTGGAGCTGGGCCACACAGGCGAAGCCGGGCCCCACGCCAT < 41bp 0.716281235944424 0.457135219969078 0.82843286 0.42806098 prediction 0.432562471888848 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170195 chr17:8170198 synonymous SNV . 0 24 hm5C_associated_SNPs_84609 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:8170157-8170208
64251 chr8 27516343 27516343 1 + C T rs540775242 27516340 + 27516320 27516360 41 GGAGTGCTACGATGTCAAGGCTGCAGTGCACCAGATCAACT GGAGTGCTACGATGTCAAGGCTGTAGTGCACCAGATCAACT < 41bp 0.770286205707428 0.55401004026276 0.042065144 0.033102125 prediction 0.432552330889336 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516340 chr8:27516343 nonsynonymous SNV 0.883 0 24 hm5C_associated_SNPs_84613 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27516272-27516344
64251 chr2 121747372 121747372 1 + G A rs115052795 121747369 + 121747349 121747389 41 GAAGTGGCACCTGACCCCACCACGATGGGCAATCGCCACAG GAAGTGGCACCTGACCCCACCACAATGGGCAATCGCCACAG < 41bp 0.800532869465979 0.584257952775758 0.41247866 0.32023293 prediction 0.432549833380442 Functional Loss - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121747369 chr2:121747372 synonymous SNV . 0 24 hm5C_associated_SNPs_84615 2 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr2:121747360-121747380
64251 chr5 68805531 68805531 1 + G A SKCM 68805528 + 68805508 68805548 41 GAACCCAACTGCTCAGTCTTCTGGATCTCTATATGGTTCAC GAACCCAACTGCTCAGTCTTCTGAATCTCTATATGGTTCAC < 41bp 0.716274629003431 0.486183902330603 0.26457825 0.1338403 prediction 0.432549258006863 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68805528 chr5:68805531 nonsynonymous SNV 0.936 4 24 hm5C_associated_SNPs_84617 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:68805491-68805536
64251 chr15 41245684 41245684 1 + G A rs549813567 41245681 + 41245661 41245701 41 GGGCGCTCAGCTGGAGCTACCGAGCGGTGCCAGGCCAGGTG GGGCGCTCAGCTGGAGCTACCGAACGGTGCCAGGCCAGGTG < 41bp 0.806535027826184 0.590262502902685 0.92097914 0.8881711 prediction 0.432545049846999 Functional Loss - CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41245681 chr15:41245684 nonsynonymous SNV 0.629 0 24 hm5C_associated_SNPs_84619 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:41245680-41245720
64251 chr19 41916713 41916713 1 + G C CESC 41916709 + 41916689 41916729 41 GGCCAGATCATCAACCCCAGCGAGGACCCCCACGTGAGAGG GGCCAGATCATCAACCCCAGCGAGCACCCCCACGTGAGAGG < 41bp 0.716255625964943 0.418046976546512 0.37301964 0.21154073 prediction 0.432511251929885 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41916709 chr19:41916713 nonsynonymous SNV 0.984 4 25 hm5C_associated_SNPs_84626 0 0 2 DGCR8 POSTAR2 ENCODE chr19:41916688-41916722
64251 chr19 41916712 41916712 1 + G A UCEC 41916709 + 41916689 41916729 41 GGCCAGATCATCAACCCCAGCGAGGACCCCCACGTGAGAGG GGCCAGATCATCAACCCCAGCGAAGACCCCCACGTGAGAGG < 41bp 0.716255625964943 0.461130877100175 0.37301964 0.20138028 prediction 0.432511251929885 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41916709 chr19:41916712 synonymous SNV . 0 24 hm5C_associated_SNPs_84627 0 0 2 DGCR8 POSTAR2 ENCODE chr19:41916688-41916722
64251 chr1 45793156 45793156 1 + G A COAD 45793153 + 45793133 45793173 41 CCTCCCGTTCGCGTGCGGGACGCGCAGGGTGCCGCCACTTA CCTCCCGTTCGCGTGCGGGACGCACAGGGTGCCGCCACTTA < 41bp 0.799879932936272 0.583629856234661 0.6304622 0.38413197 prediction 0.432500153403221 Functional Loss - HPDL ENSG00000186603 CDS Human protein_coding chr1:45793153 chr1:45793156 synonymous SNV . 0 24 hm5C_associated_SNPs_84631 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:45793151-45793189
64251 chrX 57620752 57620752 1 + G C LUAD 57620751 + 57620731 57620771 41 ACTACTGACACCAACCAAAGCGGAGTGGAACGTACATCCTG ACTACTGACACCAACCAAAGCCGAGTGGAACGTACATCCTG < 41bp 0.716248119220797 0.444827850271755 0.26728904 0.10392687 prediction 0.432496238441593 Functional Loss - ZXDB ENSG00000198455 CDS Human protein_coding chrX:57620751 chrX:57620752 synonymous SNV . 0 22 hm5C_associated_SNPs_84633 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:57620737-57620785
64251 chr19 11470518 11470518 1 + C T COAD 11470516 + 11470496 11470536 41 GATCCTGCTGGGAGAGCTGGCGCGTGCCTTTTTCCCTGCAC GATCCTGCTGGGAGAGCTGGCGTGTGCCTTTTTCCCTGCAC < 41bp 0.716246361847023 0.475661344583491 0.17081484 0.11217001 prediction 0.432492723694046 Functional Loss - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11470516 chr19:11470518 nonsynonymous SNV 0.150 2 23 hm5C_associated_SNPs_84634 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11470506-11470544
64251 chr1 162352997 162352997 1 + C T LUAD 162352995 + 162352975 162353015 41 AGTCCTGCAAGAAACATTTCCTCGGCTGGATCCTCCACCTC AGTCCTGCAAGAAACATTTCCTTGGCTGGATCCTCCACCTC < 41bp 0.71623578768985 0.455497694648254 0.15518162 0.076854736 prediction 0.432471575379699 Functional Loss - C1orf226 ENSG00000239887 CDS Human protein_coding chr1:162352995 chr1:162352997 nonsynonymous SNV 0.536 3 23 hm5C_associated_SNPs_84641 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:162352990-162353010
64251 chr16 29821526 29821526 1 + C T BRCA 29821524 + 29821504 29821544 41 GGAGGGGGTGCCTGTGAGCTCTCAGCCACTTCCCTCCCAAC GGAGGGGGTGCCTGTGAGCTCTTAGCCACTTCCCTCCCAAC < 41bp 0.777693062828577 0.561460415786524 0.15599003 0.09912601 prediction 0.432465294084105 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29821524 chr16:29821526 stopgain 1.000 1 23 hm5C_associated_SNPs_84644 0 0 57 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29821398-29821586
64251 chr11 214646 214646 1 + G C rs371654529 214642 + 214622 214662 41 ATGTGTTCAGAAGCTGCTGCCTGAGGGCAGGGCCTACCTGG ATGTGTTCAGAAGCTGCTGCCTGACGGCAGGGCCTACCTGG < 41bp 0.716230092397943 0.419355137582732 0.31819758 0.12073377 prediction 0.432460184795886 Functional Loss - RIC8A ENSG00000177963 UTR3 Human protein_coding chr11:214642 chr11:214646 . . 0 25 hm5C_associated_SNPs_84645 0 0 3 RBM15 POSTAR2 ENCODE chr11:214617-214672
64251 chr1 28863387 28863387 1 + G T LUAD 28863385 + 28863365 28863405 41 CTCGGTGGCTTGTGGGGCCTCTGTGGGGTATGCTGTGACCA CTCGGTGGCTTGTGGGGCCTCTTTGGGGTATGCTGTGACCA < 41bp 0.716228666359925 0.362846071910048 0.33861816 0.34016815 prediction 0.43245733271985 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863385 chr1:28863387 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_84646 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:28863371-28863389
64251 chrX 49093692 49093692 1 + C T LGG 49093690 + 49093670 49093710 41 GCTGCCTCTTGCCATGTCTGCCCGGTTCCGCCTGGCCATGA GCTGCCTCTTGCCATGTCTGCCTGGTTCCGCCTGGCCATGA < 41bp 0.716228393681584 0.462570163471804 0.21096778 0.32887912 prediction 0.432456787363168 Functional Loss - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093690 chrX:49093692 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_84647 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:49093682-49093727
64251 chr17 37681031 37681031 1 + G A SKCM 37681028 + 37681008 37681048 41 GCCACCTCCATCCAAAACTTCTCGAAAAGAAACTACCTCAG GCCACCTCCATCCAAAACTTCTCAAAAAGAAACTACCTCAG < 41bp 0.71622700526893 0.481498133611069 0.68956614 0.03236398 prediction 0.43245401053786 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37681028 chr17:37681031 nonsynonymous SNV 0.949 2 24 hm5C_associated_SNPs_84648 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr17:37680983-37681031
64251 chr17 37681030 37681030 1 + C T UCEC 37681028 + 37681008 37681048 41 GCCACCTCCATCCAAAACTTCTCGAAAAGAAACTACCTCAG GCCACCTCCATCCAAAACTTCTTGAAAAGAAACTACCTCAG < 41bp 0.71622700526893 0.403401761724812 0.68956614 0.050973594 prediction 0.43245401053786 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37681028 chr17:37681030 stopgain 0.929 0 23 hm5C_associated_SNPs_84649 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr17:37680983-37681031
64251 chrX 100086572 100086572 1 + G T LUAD 100086569 + 100086549 100086589 41 CTGCGAATGTCCCAACCCCTCGAGGCTTGTTAGGAGATGCT CTGCGAATGTCCCAACCCCTCGATGCTTGTTAGGAGATGCT < 41bp 0.716226356199454 0.310163557303263 0.91297626 0.30509955 prediction 0.432452712398908 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100086569 chrX:100086572 nonsynonymous SNV 0.976 4 24 hm5C_associated_SNPs_84651 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:100086557-100086587
64251 chr3 142503615 142503615 1 + C T CESC 142503612 + 142503592 142503632 41 TTGGACAGATGTCGGGTTACCGACGCAAGCCCACCTGTAAG TTGGACAGATGTCGGGTTACCGATGCAAGCCCACCTGTAAG < 41bp 0.716218854055076 0.498983244994213 0.33949435 0.31670013 prediction 0.432437708110153 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142503612 chr3:142503615 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_84657 0 0 1 U2AF2 POSTAR2 ENCODE chr3:142503524-142503631
64251 chr1 28598891 28598891 1 + C T LUAD 28598888 + 28598868 28598908 41 CTGAGTGGCTGCTGGGCCTCCACCGGGCCCCCGAGAAGCTG CTGAGTGGCTGCTGGGCCTCCACTGGGCCCCCGAGAAGCTG < 41bp 0.736908079403719 0.520691320840167 0.16432601 0.07246071 prediction 0.432433517127103 Functional Loss - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28598888 chr1:28598891 nonsynonymous SNV 0.789 1 24 hm5C_associated_SNPs_84658 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:28598878-28598892
64251 chr2 172821917 172821917 1 + C T LGG 172821915 + 172821895 172821935 41 CCACCTGGATTTTGCACAAACACGAATGATTTCCTTTCTTT CCACCTGGATTTTGCACAAACATGAATGATTTCCTTTCTTT < 41bp 0.759189502600425 0.542974797099083 0.047747612 0.052594334 prediction 0.432429411002685 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172821915 chr2:172821917 stopgain 0.994 2 23 hm5C_associated_SNPs_84660 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:172821908-172821939
64251 chr4 167020465 167020465 1 + G A SKCM 167020462 + 167020442 167020482 41 ATTGAAAGCAGAATCAAAACCAAGAGATCTGTACTCACATG ATTGAAAGCAGAATCAAAACCAAAAGATCTGTACTCACATG < 41bp 0.748512278444137 0.532307646950581 0.80579686 0.38236532 prediction 0.432409262987111 Functional Loss - TLL1 ENSG00000038295 CDS Human protein_coding chr4:167020462 chr4:167020465 nonsynonymous SNV 0.578 0 24 hm5C_associated_SNPs_84664 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:167020441-167020480
64251 chr3 45589418 45589418 1 + G A rs117187571 45589415 + 45589395 45589435 41 TGGCTCTGCCTTAGGCACTTCTCGGGAATTTGAGGCCAGCC TGGCTCTGCCTTAGGCACTTCTCAGGAATTTGAGGCCAGCC < 41bp 0.716198572151045 0.47252397986444 0.20414278 0.080467284 prediction 0.43239714430209 Functional Loss - LARS2 ENSG00000011376 UTR3 Human protein_coding chr3:45589415 chr3:45589418 . . 0 24 hm5C_associated_SNPs_84670 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:45589381-45589418
64251 chr2 187618694 187618694 1 + G T UCEC 187618691 + 187618671 187618711 41 AATCATGGTCGGGGAATGGTCAAGGAACATAACAATCATTT AATCATGGTCGGGGAATGGTCAATGAACATAACAATCATTT < 41bp 0.716192942182512 0.339249741044137 0.36367238 0.074711055 prediction 0.432385884365023 Functional Loss - FAM171B ENSG00000144369 CDS Human protein_coding chr2:187618691 chr2:187618694 nonsynonymous SNV 0.954 4 24 hm5C_associated_SNPs_84674 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:187618668-187618694
64251 chr11 608959 608959 1 + C T rs74045052 608957 + 608937 608977 41 CGGAGGTCCCGGTCCCCAAGCTCGGAGCACAGGGCACGGGA CGGAGGTCCCGGTCCCCAAGCTTGGAGCACAGGGCACGGGA < 41bp 0.808992165450272 0.592816036571479 0.57618916 0.41867143 prediction 0.432352257757587 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608957 chr11:608959 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_84682 0 0 3 RPS3 POSTAR2 ENCODE chr11:608949-608994
64251 chr15 68479948 68479948 1 + G A rs184857997 68479945 + 68479925 68479965 41 GATGATCAAGACCTCCTACACTCGTCTCGGTTTTTCCCGTA GATGATCAAGACCTCCTACACTCATCTCGGTTTTTCCCGTA < 41bp 0.716172928346725 0.482831399335041 0.14125815 0.09833038 prediction 0.432345856693449 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68479945 chr15:68479948 synonymous SNV . 0 24 hm5C_associated_SNPs_84683 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:68479928-68479948
64251 chr15 68479946 68479946 1 + T C STAD 68479945 + 68479925 68479965 41 GATGATCAAGACCTCCTACACTCGTCTCGGTTTTTCCCGTA GATGATCAAGACCTCCTACACCCGTCTCGGTTTTTCCCGTA < 41bp 0.716172928346725 0.468709966817243 0.14125815 0.10716626 prediction 0.432345856693449 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68479945 chr15:68479946 nonsynonymous SNV 0.981 1 22 hm5C_associated_SNPs_84684 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:68479928-68479948
64251 chrX 12516856 12516856 1 + G T UCEC 12516854 + 12516834 12516874 41 CGGGAACCTGGGGCTTGAGCCAGGTGCCGCCCTATGGATGG CGGGAACCTGGGGCTTGAGCCATGTGCCGCCCTATGGATGG < 41bp 0.716172744722882 0.381706683795432 0.9241445 0.54041344 prediction 0.432345489445764 Functional Loss - FRMPD4 ENSG00000169933 CDS Human protein_coding chrX:12516854 chrX:12516856 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_84685 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:12516834-12516858
64251 chr1 154248173 154248173 1 + G T LIHC 154248170 + 154248150 154248190 41 CCTGGGACGTTGGTTCCGGTCCCGGTAGCCTTGTTAACCCT CCTGGGACGTTGGTTCCGGTCCCTGTAGCCTTGTTAACCCT < 41bp 0.716169063690802 0.315944488433881 0.14636475 0.047745645 prediction 0.432338127381603 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154248170 chr1:154248173 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84687 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154248091-154248179
64251 chr8 97342505 97342505 1 + A T LUSC 97342501 + 97342481 97342521 41 ATGCAGAACACTATGGTCACCGAGAAAAGGTATGGAAGGAG ATGCAGAACACTATGGTCACCGAGTAAAGGTATGGAAGGAG < 41bp 0.71615636210879 0.385394201457899 0.43173912 0.3788127 prediction 0.432312724217579 Functional Loss - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97342501 chr8:97342505 nonsynonymous SNV 0.705 0 25 hm5C_associated_SNPs_84693 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr8:97342465-97342505
64251 chr15 101152540 101152540 1 + C T STAD 101152538 + 101152518 101152558 41 ATGCTAGAACAAGGCTATTCCCCGAATGGCCGAGATGCGAA ATGCTAGAACAAGGCTATTCCCTGAATGGCCGAGATGCGAA < 41bp 0.869590598450866 0.653439978139022 0.0665825 0.066551715 prediction 0.432301240623689 Functional Loss - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101152538 chr15:101152540 nonsynonymous SNV 0.975 3 23 hm5C_associated_SNPs_84697 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr15:101152528-101152575
64251 chr5 132424230 132424230 1 + C T UCEC 132424228 + 132424208 132424248 41 AAATGCTGATGAAGCTGTCACTCGAGGCTGTGCATTGCAGG AAATGCTGATGAAGCTGTCACTTGAGGCTGTGCATTGCAGG < 41bp 0.716141597457523 0.419544420834572 0.1643303 0.20431083 prediction 0.432283194915045 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132424228 chr5:132424230 stopgain 1.000 1 23 hm5C_associated_SNPs_84703 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:132424107-132424230
64251 chr6 1313436 1313436 1 + C T BLCA 1313434 + 1313414 1313454 41 AGCTACACGGGCTGGCGCAACTCCGTGCGCCACAACCTTTC AGCTACACGGGCTGGCGCAACTTCGTGCGCCACAACCTTTC < 41bp 0.746092760283251 0.529955462251649 0.877146 0.26168844 prediction 0.432274596063203 Functional Loss - FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313434 chr6:1313436 nonsynonymous SNV 0.973 4 23 hm5C_associated_SNPs_84705 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:1313415-1313438
64251 chr1 26507009 26507009 1 + C T SKCM 26507006 + 26506986 26507026 41 AGCTGCCTGGCAAGAACCTGCTCCAGCTCTGCCCCCAAAGC AGCTGCCTGGCAAGAACCTGCTCTAGCTCTGCCCCCAAAGC < 41bp 0.7551393852397 0.53900875188211 0.67336655 0.43858576 prediction 0.432261266715179 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26507006 chr1:26507009 stopgain 1.000 1 24 hm5C_associated_SNPs_84709 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:26506999-26507025
64251 chr7 50468100 50468100 1 + G A CESC 50468097 + 50468077 50468117 41 CTGCGCGCCGCCTCCGAGAACTCGCAGGACGCGCTCCGCGT CTGCGCGCCGCCTCCGAGAACTCACAGGACGCGCTCCGCGT < 41bp 0.716127513976884 0.496547963128166 0.07496092 0.0269773 prediction 0.432255027953769 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50468097 chr7:50468100 synonymous SNV . 0 24 hm5C_associated_SNPs_84713 0 0 3 FMR1 POSTAR2 ENCODE chr7:50468044-50468128
64251 chr16 723650 723650 1 + C T rs142354022 723648 + 723628 723668 41 CTCCCCTGACCTGGGTGTGCCTCGCTGCTGGGGCTCTGCAG CTCCCCTGACCTGGGTGTGCCTTGCTGCTGGGGCTCTGCAG < 41bp 0.716124985649423 0.490518715616982 0.26775604 0.1614098 prediction 0.432249971298846 Functional Loss - RHOT2 ENSG00000140983 UTR3 Human protein_coding chr16:723648 chr16:723650 . . 0 23 hm5C_associated_SNPs_84717 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:723644-723667
64251 chr9 15461795 15461795 1 + G A rs188286813 15461792 + 15461772 15461812 41 ATTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATGTCTA ATTGGCTTGGAGATGACAAGCACAAGTTTCTGGTATGTCTA < 41bp 0.723490023059656 0.507367631410589 0.3256483 0.14312792 prediction 0.432244783298134 Functional Loss - SNAPC3 ENSG00000164975 UTR3 Human protein_coding chr9:15461792 chr9:15461795 . . 0 24 hm5C_associated_SNPs_84718 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:15461768-15461795
64251 chr1 25667009 25667009 1 + C T BRCA 25667007 + 25666987 25667027 41 TTTCTAGAGGGCTTGAGATGCTCAGAATGCATTGACTGGGG TTTCTAGAGGGCTTGAGATGCTTAGAATGCATTGACTGGGG < 41bp 0.716121291870059 0.439984135324711 0.17480847 0.26371384 prediction 0.432242583740118 Functional Loss - TMEM50A ENSG00000183726 CDS Human protein_coding chr1:25667007 chr1:25667009 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_84720 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr1:25666971-25667038
64251 chr7 150746502 150746502 1 + C T SKCM 150746500 + 150746480 150746520 41 CCTTGTGGGCCTGAGAACTTCACCACGGTGAGCTGACCTCC CCTTGTGGGCCTGAGAACTTCATCACGGTGAGCTGACCTCC < 41bp 0.838638109134465 0.622522949052189 0.41006693 0.30125135 prediction 0.432230320164553 Functional Loss - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746500 chr7:150746502 nonsynonymous SNV 0.860 3 23 hm5C_associated_SNPs_84726 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr7:150746484-150746506
64251 chr9 135546108 135546108 1 + G T LGG 135546106 + 135546086 135546126 41 AGCCAGCAGCGGACGCGGCCCCGGGGCCCAGCGCTGCATTC AGCCAGCAGCGGACGCGGCCCCTGGGCCCAGCGCTGCATTC < 41bp 0.916195636100496 0.700081170561896 0.89649826 0.34828693 prediction 0.432228931077201 Functional Loss - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135546106 chr9:135546108 synonymous SNV . 0 23 hm5C_associated_SNPs_84727 0 0 9 DDX3X POSTAR2 ENCODE chr9:135546065-135546133
64251 chr19 44118224 44118224 1 + G A rs541374770 44118221 + 44118201 44118241 41 AATCTACAGTCCCCAGAAGTCCCGACTGGAAGAGATCCCCT AATCTACAGTCCCCAGAAGTCCCAACTGGAAGAGATCCCCT < 41bp 0.775306779968994 0.559194444959554 0.02104649 0.030557185 prediction 0.43222467001888 Functional Loss - SRRM5 ENSG00000226763 CDS Human protein_coding chr19:44118221 chr19:44118224 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_84729 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44118207-44118245
64251 chr12 110024582 110024582 1 + G T UCEC 110024579 + 110024559 110024599 41 GAGGAGCCCTCCGATACCATCAAGGGAAGATTTCATCCTTA GAGGAGCCCTCCGATACCATCAATGGAAGATTTCATCCTTA < 41bp 0.716103971643537 0.304910842221058 0.9000956 0.34514078 prediction 0.432207943287074 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110024579 chr12:110024582 nonsynonymous SNV 0.478 5 24 hm5C_associated_SNPs_84731 0 0 5 BUD13 POSTAR2 ENCODE chr12:110024570-110024672
64251 chr9 132901404 132901404 1 + G A rs529600253 132901401 + 132901381 132901421 41 GCCCCTGGCCTTGTAAGACTCACGTAAGCTAAGTCCAGGAT GCCCCTGGCCTTGTAAGACTCACATAAGCTAAGTCCAGGAT < 41bp 0.722416272871756 0.506315771706172 0.1454091 0.07618952 prediction 0.43220100233117 Functional Loss - GPR107 ENSG00000148358 UTR3 Human protein_coding chr9:132901401 chr9:132901404 . . 0 24 hm5C_associated_SNPs_84732 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:132901397-132901422
64251 chr19 11727567 11727567 1 + C T CESC 11727564 + 11727544 11727584 41 GGTGGTCAAGGTGAAGAAACCTTCAGCCAGATTCCAGATGG GGTGGTCAAGGTGAAGAAACCTTTAGCCAGATTCCAGATGG < 41bp 0.729074383830227 0.512974996648085 0.10997945 0.07975048 prediction 0.432198774364284 Functional Loss - ZNF627 ENSG00000198551 CDS Human protein_coding chr19:11727564 chr19:11727567 synonymous SNV . 0 24 hm5C_associated_SNPs_84733 0 0 2 BUD13 POSTAR2 ENCODE chr19:11727498-11727567
64251 chr12 971300 971300 1 + G A UCS 971297 + 971277 971317 41 ATCCTCTGTCTTCACAGAATCTCGAGTGAGCAGCCAACAGA ATCCTCTGTCTTCACAGAATCTCAAGTGAGCAGCCAACAGA < 41bp 0.716098583538491 0.488673949136104 0.21627462 0.10443348 prediction 0.432197167076983 Functional Loss - WNK1 ENSG00000060237 CDS Human protein_coding chr12:971297 chr12:971300 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_84734 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr12:971259-971300
64251 chr7 143088085 143088085 1 + G A rs4859 143088082 + 143088062 143088102 41 CCCGCGCCCTCGGCCGGCCCCCCGAGCAGCCTTTGTACTCT CCCGCGCCCTCGGCCGGCCCCCCAAGCAGCCTTTGTACTCT < 41bp 0.747726666497244 0.531628209920574 0.06842548 0.05381185 prediction 0.432196913153338 Functional Loss - ZYX ENSG00000159840 UTR3 Human protein_coding chr7:143088082 chr7:143088085 . . 0 24 hm5C_associated_SNPs_84736 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:143087932-143088131
64251 chr21 47969758 47969758 1 + C T HNSC 47969756 + 47969736 47969776 41 GCTGAGCAGCGGCCGGATGCCTCGGAGGAGGACAGCTTCCA GCTGAGCAGCGGCCGGATGCCTTGGAGGAGGACAGCTTCCA < 41bp 0.838237340155414 0.622145426083869 0.22377458 0.21153033 prediction 0.432183828143089 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47969756 chr21:47969758 nonsynonymous SNV 0.753 3 23 hm5C_associated_SNPs_84740 0 0 6 AARS POSTAR2 ENCODE chr21:47969696-47969779
64251 chr10 75871847 75871847 1 + G T THYM 75871844 + 75871824 75871864 41 CCGCGGCTCAGTCCTTGCATCGGGAAGCTACCAAGTGGTCT CCGCGGCTCAGTCCTTGCATCGGTAAGCTACCAAGTGGTCT < 41bp 0.716090911448086 0.33163615909051 0.89780045 0.49646136 prediction 0.432181822896172 Functional Loss - VCL ENSG00000035403 CDS Human protein_coding chr10:75871844 chr10:75871847 stopgain 1.000 1 24 hm5C_associated_SNPs_84741 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:75871841-75871855
64251 chr3 113795776 113795776 1 + G A SKCM 113795773 + 113795753 113795793 41 CATCAGTCACTGCAGAGCTGCCGGAGGACAAGCCAAGGCCA CATCAGTCACTGCAGAGCTGCCGAAGGACAAGCCAAGGCCA < 41bp 0.716090701096716 0.465522981697904 0.8952823 0.36778614 prediction 0.432181402193432 Functional Loss - QTRT2 ENSG00000151576 CDS Human protein_coding chr3:113795773 chr3:113795776 nonsynonymous SNV 0.954 2 24 hm5C_associated_SNPs_84742 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:113795727-113795776
64251 chr12 53453230 53453230 1 + G T LUSC 53453228 + 53453208 53453248 41 CGCCAGGGCTACCGGGAGCCCTGCGGGGTTCCCAATGGGGG CGCCAGGGCTACCGGGAGCCCTTCGGGGTTCCCAATGGGGG < 41bp 0.716090655854835 0.364626492560038 0.61732066 0.5866954 prediction 0.43218131170967 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453228 chr12:53453230 nonsynonymous SNV 0.983 4 23 hm5C_associated_SNPs_84743 0 0 1 RBFOX2 POSTAR2 ENCODE chr12:53453220-53453322
64251 chr1 233091398 233091398 1 + G A UCEC 233091395 + 233091375 233091415 41 TTTATACCGAAGAAGTCAGACAGGGAGGGAGAAGAATAGGA TTTATACCGAAGAAGTCAGACAGAGAGGGAGAAGAATAGGA < 41bp 0.766555709338971 0.550473109453634 0.436389 0.33262396 prediction 0.432165199770673 Functional Loss - NTPCR ENSG00000135778 CDS Human protein_coding chr1:233091395 chr1:233091398 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_84748 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:233091381-233091419
64251 chr7 36445878 36445878 1 + G A UCEC 36445875 + 36445855 36445895 41 AGACCTCTGCTTTCAAATGCCTCGGCAACTCCAGTTGGCAG AGACCTCTGCTTTCAAATGCCTCAGCAACTCCAGTTGGCAG < 41bp 0.788995267107118 0.572915084113 0.12510389 0.023000628 prediction 0.432160365988236 Functional Loss - ANLN ENSG00000011426 CDS Human protein_coding chr7:36445875 chr7:36445878 synonymous SNV . 0 24 hm5C_associated_SNPs_84750 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:36445863-36445888
64251 chr1 210014250 210014250 1 + G A CESC 210014247 + 210014227 210014267 41 CTCTATGCCCCGTTTTACTCCTCGGATATCCTCATTGCTTC CTCTATGCCCCGTTTTACTCCTCAGATATCCTCATTGCTTC < 41bp 0.792636939952582 0.576556855658022 0.14148077 0.07281318 prediction 0.432160168589121 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210014247 chr1:210014250 synonymous SNV . 0 24 hm5C_associated_SNPs_84751 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:210014224-210014253
64251 chr10 43604511 43604511 1 + G T LUSC 43604507 + 43604487 43604527 41 CTCAACCGGAACCTCTCCATCTCGGAGAACCGCACCATGCA CTCAACCGGAACCTCTCCATCTCGTAGAACCGCACCATGCA < 41bp 0.721766318025598 0.50568754580312 0.9520107 0.80276275 prediction 0.432157544444957 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43604507 chr10:43604511 stopgain 0.283 1 25 hm5C_associated_SNPs_84753 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039855 chr10:43604495-43604516
64251 chr19 52448658 52448658 1 + G T ESCA 52448656 + 52448636 52448676 41 CAGACATCGGAGAACTCATACAGGGGAGAGACCGTATGGAT CAGACATCGGAGAACTCATACATGGGAGAGACCGTATGGAT < 41bp 0.904420560114955 0.688343654003702 0.79901075 0.26743826 prediction 0.432153812222505 Functional Loss - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52448656 chr19:52448658 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_84755 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:52448625-52448661
64251 chr20 3630100 3630100 1 + A T rs116988078 3630096 + 3630076 3630116 41 ATGCTGGATATCCAGGTTCTCGCCAGGCCCCGATACATGAA ATGCTGGATATCCAGGTTCTCGCCTGGCCCCGATACATGAA < 41bp 0.716076541563292 0.417104084291997 0.7730316 0.20278978 prediction 0.432153083126584 Functional Loss - ATRN ENSG00000088812 UTR3 Human protein_coding chr20:3630096 chr20:3630100 . . 0 25 hm5C_associated_SNPs_84756 0 0 2 DDX55 POSTAR2 ENCODE chr20:3630042-3630109
64251 chr3 30732963 30732963 1 + G T HNSC 30732960 + 30732940 30732980 41 CTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCC CTGAGTGCTGGGACCACGACCCATAGGCCCGTCTCACAGCC < 41bp 0.716073619095205 0.326640165606389 0.21236864 0.012507975 prediction 0.432147238190411 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30732960 chr3:30732963 stopgain 0.784 1 24 hm5C_associated_SNPs_84757 0 0 4 GRWD1 POSTAR2 ENCODE chr3:30732939-30732988
64251 chr3 30732964 30732964 1 + A T PAAD 30732960 + 30732940 30732980 41 CTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCC CTGAGTGCTGGGACCACGACCCAGTGGCCCGTCTCACAGCC < 41bp 0.716073619095205 0.39963720310093 0.21236864 0.071519256 prediction 0.432147238190411 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30732960 chr3:30732964 nonsynonymous SNV 0.843 4 25 hm5C_associated_SNPs_84758 0 0 4 GRWD1 POSTAR2 ENCODE chr3:30732939-30732988
64251 chr19 10200684 10200684 1 + C T BRCA 10200681 + 10200661 10200701 41 CGGCAGTTTGCCTGCTCCTCCTGCGACCACGTCTGGTGGCG CGGCAGTTTGCCTGCTCCTCCTGTGACCACGTCTGGTGGCG < 41bp 0.716070123294099 0.498544482397639 0.2720819 0.22990754 prediction 0.432140246588198 Functional Loss - C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200681 chr19:10200684 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_84761 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr8 72756399 72756399 1 - C T COAD 72756402 - 72756382 72756422 41 GACAACGGGATGTCCACGGGCTCGGTGAGTGATCCGGAGGA GACAACGGGATGTCCACGGGCTCAGTGAGTGATCCGGAGGA < 41bp 0.804473300909423 0.588404667810336 0.41667154 0.25643572 prediction 0.432137266198175 Functional Loss - MSC ENSG00000178860 CDS Human protein_coding chr8:72756402 chr8:72756399 synonymous SNV . 0 24 hm5C_associated_SNPs_84765 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr8:72756380-72756427
64251 chr19 34890190 34890190 1 + C T LUSC 34890187 + 34890167 34890207 41 CGGAGGAGGCCCGAAAGGAGCTCCAGGCTGCGGGCAAGAGT CGGAGGAGGCCCGAAAGGAGCTCTAGGCTGCGGGCAAGAGT < 41bp 0.716064296539675 0.477068197926966 0.45038563 0.37109837 prediction 0.43212859307935 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34890187 chr19:34890190 stopgain 0.862 1 24 hm5C_associated_SNPs_84769 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34890140-34890196
64251 chr8 29952925 29952925 1 + C T rs114412309 29952923 + 29952903 29952943 41 CCGGCGGAAGTGCTGCGTCGCGCACTTCCGGGTGTTGTCTG CCGGCGGAAGTGCTGCGTCGCGTACTTCCGGGTGTTGTCTG < 41bp 0.71605928800451 0.49894093202196 0.17521468 0.18427819 prediction 0.43211857600902 Functional Loss - LEPROTL1 ENSG00000104660 UTR5 Human protein_coding chr8:29952923 chr8:29952925 . . 0 23 hm5C_associated_SNPs_84773 0 0 4 ELAVL1 POSTAR2 GSE29943,GSM741173 chr8:29952920-29952940
64251 chr1 16258553 16258553 1 + G A BLCA 16258550 + 16258530 16258570 41 AGAGATTGGAGCGAGAGCTTCAGGAGGCTGCAGCGGTTCCC AGAGATTGGAGCGAGAGCTTCAGAAGGCTGCAGCGGTTCCC < 41bp 0.775273375119098 0.559224752369402 0.91198933 0.8109898 prediction 0.43209724549939 Functional Loss - SPEN ENSG00000065526 CDS Human protein_coding chr1:16258550 chr1:16258553 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_84780 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:16258479-16258568
64251 chrX 49855396 49855396 1 + C T SKCM 49855393 + 49855373 49855413 41 TTATTTCACGGAGCATTCTCCTCCATTGCCACCATACACTC TTATTTCACGGAGCATTCTCCTCTATTGCCACCATACACTC < 41bp 0.716046292006166 0.483422957531888 0.9700041 0.95441294 prediction 0.432092584012332 Functional Loss - CLCN5 ENSG00000171365 CDS Human protein_coding chrX:49855393 chrX:49855396 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_84781 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:49855385-49855460
64251 chr11 19184859 19184859 1 + G A rs115205445 19184856 + 19184836 19184876 41 AACTTGGCTTTAACATTTAGCAGGAGCCCCTTTCTATTTCA AACTTGGCTTTAACATTTAGCAGAAGCCCCTTTCTATTTCA < 41bp 0.767012632752798 0.550979886771288 0.6479068 0.15386006 prediction 0.432065491963019 Functional Loss - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19184856 chr11:19184859 nonsynonymous SNV 0.502 0 24 hm5C_associated_SNPs_84787 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr11:19184855-19184891
64251 chr16 3109748 3109748 1 + G T rs77078682 3109746 + 3109726 3109766 41 ACTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCCCAGA ACTGGTGGGGACCTGGGACCCATACCCGGAACCAGCCCAGA < 41bp 0.716031564863914 0.376904070415544 0.15710855 0.018883884 prediction 0.432063129727827 Functional Loss - MMP25 ENSG00000008516 UTR3 Human protein_coding chr16:3109746 chr16:3109748 . . 0 23 hm5C_associated_SNPs_84788 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:3109711-3109748
64251 chrX 109416558 109416558 1 + G A UCEC 109416555 + 109416535 109416575 41 CTGGTATCGCATCTGGGCCTCGGGACACCAGACTCTCATGA CTGGTATCGCATCTGGGCCTCGGAACACCAGACTCTCATGA < 41bp 0.779546898255222 0.563517299988943 0.40186116 0.29888165 prediction 0.432059196532558 Functional Loss - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109416555 chrX:109416558 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_84789 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:109416543-109416565
64251 chr17 65944394 65944394 1 + T C STAD 65944393 + 65944373 65944413 41 TCCTGAAGAAGAGAGCACTCCTGGACAAGGATCTGCAAATT TCCTGAAGAAGAGAGCACTCCCGGACAAGGATCTGCAAATT < 41bp 0.716029544304287 0.460752786716118 0.37972927 0.29967457 prediction 0.432059088608574 Functional Loss - BPTF ENSG00000171634 CDS Human protein_coding chr17:65944393 chr17:65944394 nonsynonymous SNV 0.621 3 22 hm5C_associated_SNPs_84790 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65944352-65944412
64251 chr9 139820421 139820421 1 + G A rs7852970 139820418 + 139820398 139820438 41 CCGGCTCACGGAGGGGCCACCACGCTGGGCCAGGGTCTCAC CCGGCTCACGGAGGGGCCACCACACTGGGCCAGGGTCTCAC < 41bp 0.78636313303572 0.570334073144871 0.3063805 0.6257339 prediction 0.432058119781699 Functional Loss - TRAF2 ENSG00000127191 UTR3 Human protein_coding chr9:139820418 chr9:139820421 . . 0 24 hm5C_associated_SNPs_84791 0 0 1 METAP2 POSTAR2 ENCODE chr9:139820355-139820450
64251 chr21 47412098 47412098 1 + G C COAD 47412094 + 47412074 47412114 41 ACAGGGCCAGCCGGGAGAGCCTGGGCCCCCCGGAGAGAAAG ACAGGGCCAGCCGGGAGAGCCTGGCCCCCCCGGAGAGAAAG < 41bp 0.716028272735413 0.410849648074532 0.8293376 0.37153822 prediction 0.432056545470826 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47412094 chr21:47412098 synonymous SNV . 0 25 hm5C_associated_SNPs_84792 0 0 2 PPIG POSTAR2 ENCODE chr21:47412076-47412118
64251 chr1 151261168 151261168 1 + C T COAD 151261166 + 151261146 151261186 41 AGGCCTGTCTGCACGTCTCTCGCCGTGTAGGATACAGGTGC AGGCCTGTCTGCACGTCTCTCGTCGTGTAGGATACAGGTGC < 41bp 0.716026496798715 0.443079221874715 0.65671706 0.59750646 prediction 0.43205299359743 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151261166 chr1:151261168 synonymous SNV . 0 23 hm5C_associated_SNPs_84794 0 0 3 IGF2BP1 POSTAR2 ENCODE chr1:151261126-151261182
64251 chr12 65564742 65564742 1 + C T UCEC 65564739 + 65564719 65564759 41 AACCCGAAGAGGAACTTCTCCAGCAATTTAAACGGGAGGAG AACCCGAAGAGGAACTTCTCCAGTAATTTAAACGGGAGGAG < 41bp 0.720595928646903 0.50457575582267 0.02437368 0.03063193 prediction 0.432040345648467 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564739 chr12:65564742 stopgain 0.999 1 24 hm5C_associated_SNPs_84798 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:65564740-65564760
64251 chr1 111439300 111439300 1 + C T GBM 111439298 + 111439278 111439318 41 CAGTGTTGTGGTATAAATGGCACGAGTGATTGGACCAGTGG CAGTGTTGTGGTATAAATGGCATGAGTGATTGGACCAGTGG < 41bp 0.842971748135174 0.626956185552702 0.20522007 0.255085 prediction 0.432031125164943 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111439298 chr1:111439300 nonsynonymous SNV 0.946 1 23 hm5C_associated_SNPs_84800 0 0 2 SND1 POSTAR2 ENCODE chr1:111439283-111439343
64251 chr15 89838324 89838324 1 + C T UCEC 89838322 + 89838302 89838342 41 TCAGAACCTCTGTGACATAACTCGGTAAGCCACTCCCACCC TCAGAACCTCTGTGACATAACTTGGTAAGCCACTCCCACCC < 41bp 0.841148173499749 0.625133791755735 0.19997555 0.24279314 prediction 0.432028763488028 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89838322 chr15:89838324 stopgain 1.000 1 23 hm5C_associated_SNPs_84802 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:89838284-89838352
64251 chr14 101200826 101200826 1 + G A LGG 101200823 + 101200803 101200843 41 GTCTCACCTGTGTCAAGAAGCGCGCGCTGAGCCCCCAGCAG GTCTCACCTGTGTCAAGAAGCGCACGCTGAGCCCCCAGCAG < 41bp 0.827906944050573 0.6118926960414 0.20740083 0.05246076 prediction 0.432028496018346 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200823 chr14:101200826 nonsynonymous SNV 0.093 0 24 hm5C_associated_SNPs_84803 0 0 8 METAP2 POSTAR2 ENCODE chr14:101200810-101200839
64251 chr19 34890640 34890640 1 + G T UCEC 34890637 + 34890617 34890657 41 TCTGCAGCCATGTATGAGCACAAGATCTTCGTTCAGGGCAT TCTGCAGCCATGTATGAGCACAATATCTTCGTTCAGGGCAT < 41bp 0.716013409659801 0.313908460885142 0.37223655 0.1856688 prediction 0.432026819319602 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34890637 chr19:34890640 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_84805 0 0 37 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:34890620-34890640
64251 chr11 35198160 35198160 1 + G A STAD 35198157 + 35198137 35198177 41 GCCGCTTTGCAGGTGTATTCCACGTGGAGAAAAATGGTCGC GCCGCTTTGCAGGTGTATTCCACATGGAGAAAAATGGTCGC < 41bp 0.75134723149893 0.535334536897923 0.3870799 0.26242763 prediction 0.432025389202014 Functional Loss - CD44 ENSG00000026508 CDS Human protein_coding chr11:35198157 chr11:35198160 nonsynonymous SNV 0.912 4 24 hm5C_associated_SNPs_84806 0 0 3 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35198160-35198180
64251 chr10 38344089 38344089 1 + G A UCEC 38344086 + 38344066 38344106 41 CTGGGAGAAGTCACATCTCACTCGACATCAGAGGGTGCACA CTGGGAGAAGTCACATCTCACTCAACATCAGAGGGTGCACA < 41bp 0.728282149134934 0.51227021139183 0.16493091 0.048697025 prediction 0.432023875486209 Functional Loss - ZNF33A ENSG00000189180 CDS Human protein_coding chr10:38344086 chr10:38344089 nonsynonymous SNV 0.934 0 24 hm5C_associated_SNPs_84807 0 0 3 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr10:38344071-38344092
64251 chr3 132257578 132257578 1 + G A rs529192980 132257575 + 132257555 132257595 41 GCCATCCTCCCCCCACCATCCAAGACTATTAGGTTTTGTCC GCCATCCTCCCCCCACCATCCAAAACTATTAGGTTTTGTCC < 41bp 0.7160115871246 0.497696443637637 0.8746587 0.33746168 prediction 0.4320231742492 Functional Loss - DNAJC13 ENSG00000138246 UTR3 Human protein_coding chr3:132257575 chr3:132257578 . . 0 24 hm5C_associated_SNPs_84809 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:132257555-132257586
64251 chr5 65054587 65054587 1 + G A rs34339013 65054584 + 65054564 65054604 41 TGTACGATGCTGTTGGAATGCTCGGTATTGAGGAAGTAACT TGTACGATGCTGTTGGAATGCTCAGTATTGAGGAAGTAACT < 41bp 0.716010594024355 0.48719134749707 0.14870337 0.20471177 prediction 0.43202118804871 Functional Loss - NLN ENSG00000123213 CDS Human protein_coding chr5:65054584 chr5:65054587 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_84811 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:65054556-65054604
64251 chr11 124502020 124502020 1 + A T rs75601279 124502016 + 124501996 124502036 41 GGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTT GGACCTCCCAGAGCTTCAGCCTGCTGCCTTTGTGTCTTCTT < 41bp 0.715999118050335 0.388341825790624 0.2714483 0.21790203 prediction 0.43199823610067 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502016 chr11:124502020 synonymous SNV . 0 25 hm5C_associated_SNPs_84817 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:124502012-124502046
64251 chr17 18141431 18141431 1 + G A STAD 18141428 + 18141408 18141448 41 GGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGA GGCCATGGAGGGTCCGCTCTCCCAGGTGAAGTCTCTCAAGA < 41bp 0.81182193351479 0.595824556899751 0.9344263 0.43295714 prediction 0.431994753230079 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18141428 chr17:18141431 nonsynonymous SNV 0.970 3 24 hm5C_associated_SNPs_84819 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18141423-18141438
64251 chr7 64167567 64167567 1 + T C rs142510880 64167566 + 64167546 64167586 41 TAAACAGGAGAAAATTCATACTGGAGGGAAACTCAACAAAT TAAACAGGAGAAAATTCATACCGGAGGGAAACTCAACAAAT < 41bp 0.739252149585814 0.523258042182322 0.32901755 0.43365282 prediction 0.431988214806985 Functional Loss - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64167566 chr7:64167567 synonymous SNV . 0 22 hm5C_associated_SNPs_84824 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:64167555-64167583
64251 chr2 231927299 231927299 1 + G A STAD 231927296 + 231927276 231927316 41 CATCTAAAGTATTTTATCACCTGGGGGCTTTTGAGGAGTCT CATCTAAAGTATTTTATCACCTGAGGGCTTTTGAGGAGTCT < 41bp 0.760114837370406 0.544130214256511 0.4307791 0.26759663 prediction 0.431969246227789 Functional Loss - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231927296 chr2:231927299 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_84829 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:231927284-231927308
64251 chr16 3170014 3170014 1 + C T SKCM 3170012 + 3169992 3170032 41 GGGTCAAGCCCTATCCGTGCCCCGAGTGCGGCAAGTGCTTC GGGTCAAGCCCTATCCGTGCCCTGAGTGCGGCAAGTGCTTC < 41bp 0.715984390969348 0.471799896095766 0.099983096 0.05018851 prediction 0.431968781938697 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3170012 chr16:3170014 synonymous SNV . 0 23 hm5C_associated_SNPs_84830 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:3169996-3170040
64251 chr17 75190846 75190846 1 + A C rs673918 75190842 + 75190822 75190862 41 CGTTGGAGTCCGCCTTCCATCACGACCTCTTCAGAGACATC CGTTGGAGTCCGCCTTCCATCACGCCCTCTTCAGAGACATC < 41bp 0.715981630121257 0.299564178268994 0.038319975 0.026079953 prediction 0.431963260242514 Functional Loss - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75190842 chr17:75190846 nonsynonymous SNV 0.012 0 25 hm5C_associated_SNPs_84832 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr17:75190835-75190856
64251 chr1 63876858 63876858 1 + T C LGG 63876857 + 63876837 63876877 41 GCTTTGCTTTGTGGGGTGTTCTTGGAATATCTTGTGACTGC GCTTTGCTTTGTGGGGTGTTCCTGGAATATCTTGTGACTGC < 41bp 0.715977729577304 0.472791826010697 0.1910621 0.2536342 prediction 0.431955459154607 Functional Loss - ALG6 ENSG00000088035 CDS Human protein_coding chr1:63876857 chr1:63876858 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_84834 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:63876815-63876858
64251 chr3 172046848 172046848 1 + G A rs148307624 172046845 + 172046825 172046865 41 GTACACATTCAGGCTGGCCGCTCGAAACGACATTGGTACCA GTACACATTCAGGCTGGCCGCTCAAAACGACATTGGTACCA < 41bp 0.771524617212583 0.555548145440605 0.32335117 0.17548996 prediction 0.431952943543955 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172046845 chr3:172046848 nonsynonymous SNV 0.912 1 24 hm5C_associated_SNPs_84835 0 0 4 DDX24 POSTAR2 ENCODE chr3:172046741-172046859
64251 chr1 11810259 11810259 1 + C T COAD 11810257 + 11810237 11810277 41 CCGAGGGTACTGAAGCCAGCCACGCTGCGCCCGGCCCTGCC CCGAGGGTACTGAAGCCAGCCATGCTGCGCCCGGCCCTGCC < 41bp 0.782249636326311 0.566280056322713 0.17949134 0.23639846 prediction 0.431939160007196 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11810257 chr1:11810259 synonymous SNV . 0 23 hm5C_associated_SNPs_84842 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:11810232-11810275
64251 chr21 34922690 34922690 1 + G T ESCA 34922688 + 34922668 34922708 41 GGCCTCAGCGATGGAGTTGCCGGGGCCACCTGCGACCTCCA GGCCTCAGCGATGGAGTTGCCGTGGCCACCTGCGACCTCCA < 41bp 0.913523519047822 0.697555417193755 0.9493245 0.85789055 prediction 0.431936203708134 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922688 chr21:34922690 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_84843 0 0 30 FMR1 POSTAR2 GSE39682,GSM977615 chr21:34922290-34922710
64251 chr2 74683265 74683265 1 + G A LAML 74683262 + 74683242 74683282 41 ATCTCTCTCCCTCTCCACTTCGGGACCTATCAGGAGGGTTA ATCTCTCTCCCTCTCCACTTCGGAACCTATCAGGAGGGTTA < 41bp 0.784801578739598 0.568835115928445 0.90255314 0.34902993 prediction 0.431932925622306 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74683262 chr2:74683265 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_84846 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:74683241-74683272
64251 chr11 43702403 43702403 1 + G A COAD 43702400 + 43702380 43702420 41 GGAGAGCGCTCTCCCCGCCGCCGGCTTCCTGTACTGGGTCG GGAGAGCGCTCTCCCCGCCGCCGACTTCCTGTACTGGGTCG < 41bp 0.715945568894076 0.47051235377263 0.28246233 0.10214287 prediction 0.431891137788152 Functional Loss - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43702400 chr11:43702403 nonsynonymous SNV 0.921 0 24 hm5C_associated_SNPs_84850 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr11:43702371-43702410
64251 chr17 6904993 6904993 1 - C A UCEC 6904996 - 6904976 6905016 41 ATTTCGGACCCAGGACTTTGCCAGGAGCCAGGCAAGTGGGG ATTTCGGACCCAGGACTTTGCCATGAGCCAGGCAAGTGGGG < 41bp 0.715934145019827 0.341553271955881 0.8966949 0.2813142 prediction 0.431868290039654 Functional Loss - ALOX12 ENSG00000108839 CDS Human protein_coding chr17:6904996 chr17:6904993 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_84854 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:6904980-6905000
64251 chr9 140508784 140508784 1 + G A PAAD 140508781 + 140508761 140508801 41 ATAAGGCCAAGCGCTGGATCCACGACGTACGGACCATTGCG ATAAGGCCAAGCGCTGGATCCACAACGTACGGACCATTGCG < 41bp 0.810977387163768 0.595043487115255 0.4331475 0.2081646 prediction 0.431867800097028 Functional Loss - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508781 chr9:140508784 nonsynonymous SNV 0.707 3 24 hm5C_associated_SNPs_84855 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:140508784-140508795
64251 chr22 38040958 38040958 1 + G A rs139912442 38040955 + 38040935 38040975 41 TGGCTGAGCTGAGGGAGAACCACGGCCAAGCAGGTGGGGAC TGGCTGAGCTGAGGGAGAACCACAGCCAAGCAGGTGGGGAC < 41bp 0.802903953685795 0.586970652795603 0.88591045 0.5682358 prediction 0.431866601780384 Functional Loss - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38040955 chr22:38040958 nonsynonymous SNV 0.575 0 24 hm5C_associated_SNPs_84857 0 0 2 PPIG POSTAR2 ENCODE chr22:38040898-38040961
64251 chr9 34649475 34649475 1 + C T THCA 34649473 + 34649453 34649493 41 GCTGCACGCTCATTACTACCCTCCGCTCCTGCGCTCTGCCA GCTGCACGCTCATTACTACCCTTCGCTCCTGCGCTCTGCCA < 41bp 0.715933238710688 0.422977865437949 0.10935238 0.046735853 prediction 0.431866477421376 Functional Loss - GALT ENSG00000213930 CDS Human protein_coding chr9:34649473 chr9:34649475 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_84858 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr9:34649460-34649480
64251 chr20 34519335 34519335 1 + C T UCEC 34519332 + 34519312 34519352 41 TGCAGAGAGTGATTGAGGTTCTGCATGGCCTGCAGCTCAAG TGCAGAGAGTGATTGAGGTTCTGTATGGCCTGCAGCTCAAG < 41bp 0.736657924459596 0.520726215021092 0.192952 0.18439281 prediction 0.431863418877009 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34519332 chr20:34519335 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_84859 0 0 5 LIN28A POSTAR2 GSE39873,GSM980594 chr20:34519315-34519336
64251 chr9 2115859 2115859 1 + A C BLCA 2115858 + 2115838 2115878 41 ACCGAGCTCACCGCATCGGGCAGCAGAACGAGGTCCGGGTA ACCGAGCTCACCGCATCGGGCCGCAGAACGAGGTCCGGGTA < 41bp 0.823954718424746 0.608028126559675 0.44664586 0.26490206 prediction 0.431853183730142 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115858 chr9:2115859 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_84863 0 0 2 GRWD1 POSTAR2 ENCODE chr9:2115821-2115883
64251 chr19 58264813 58264813 1 + G T UCEC 58264811 + 58264791 58264831 41 TCCTGGGAGATATCTTACACCAGGGAACACAACACAATCAG TCCTGGGAGATATCTTACACCATGGAACACAACACAATCAG < 41bp 0.715923229071732 0.378562095705942 0.41761065 0.02052167 prediction 0.431846458143465 Functional Loss - ZNF776 ENSG00000152443;ENSG00000269026 CDS Human other chr19:58264811 chr19:58264813 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_84865 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:58264784-58264813
64251 chr9 100845196 100845196 1 + C T STAD 100845193 + 100845173 100845213 41 ATTCTAACAATGGACATGCTCACCGTGAAGGTGGGTGAGCC ATTCTAACAATGGACATGCTCACTGTGAAGGTGGGTGAGCC < 41bp 0.718743158195685 0.502820050865911 0.059341013 0.04048428 prediction 0.431846214659548 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100845193 chr9:100845196 synonymous SNV . 0 24 hm5C_associated_SNPs_84866 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:100845180-100845200
64251 chr10 101464379 101464379 1 + C T SKCM 101464376 + 101464356 101464396 41 CCGACAAACACGAGCCTCAGCTCCATTGGACTTGCTGTGGC CCGACAAACACGAGCCTCAGCTCTATTGGACTTGCTGTGGC < 41bp 0.767825442551445 0.551910758997602 0.8875898 0.31355053 prediction 0.431829367107685 Functional Loss - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101464376 chr10:101464379 nonsynonymous SNV 0.369 1 24 hm5C_associated_SNPs_84872 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:101464360-101464400
64251 chr8 22865619 22865619 1 - C T STAD 22865622 - 22865602 22865642 41 TTGTGTCCTCAGCCTTACCTCCCGGGTGGAGCTCTCCACAA TTGTGTCCTCAGCCTTACCTCCCAGGTGGAGCTCTCCACAA < 41bp 0.715913218967792 0.46514301456335 0.36822778 0.08761963 prediction 0.431826437935585 Functional Loss - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865622 chr8:22865619 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_84873 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:22865573-22865630
64251 chr20 35835810 35835810 1 + T C GBM 35835809 + 35835789 35835829 41 CGTGCCAGTTGTGGTTGTGCCTGAGGGCTCTGCTTCCGACA CGTGCCAGTTGTGGTTGTGCCCGAGGGCTCTGCTTCCGACA < 41bp 0.807424611347457 0.591512578862691 0.1106959 0.31515986 prediction 0.431824064969534 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35835809 chr20:35835810 synonymous SNV . 0 22 hm5C_associated_SNPs_84874 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:35835777-35835821
64251 chrX 153677614 153677614 1 + G A UCEC 153677611 + 153677591 153677631 41 AGCAGTTCCTGCAGAAGGCGCTCGAGATCCTTCGGAAAGAC AGCAGTTCCTGCAGAAGGCGCTCAAGATCCTTCGGAAAGAC < 41bp 0.803933556972618 0.588026221858276 0.060955197 0.044702202 prediction 0.431814670228685 Functional Loss - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153677611 chrX:153677614 nonsynonymous SNV 0.363 2 24 hm5C_associated_SNPs_84880 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:153677612-153677644
64251 chr18 8813163 8813163 1 + G A rs567434652 8813160 + 8813140 8813180 41 ACCGGGAGAAGGTGGAACTTCTCGACCGCCTGGACAGAGAT ACCGGGAGAAGGTGGAACTTCTCAACCGCCTGGACAGAGAT < 41bp 0.790915901418718 0.575010809916877 0.6587434 0.39704973 prediction 0.43181018300368 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8813160 chr18:8813163 nonsynonymous SNV 0.918 0 24 hm5C_associated_SNPs_84882 0 0 5 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr18:8813160-8813180
64251 chr10 121203198 121203198 1 + G A SKCM 121203195 + 121203175 121203215 41 AAGCGGGAGGAGGTGGACCGCCGGGTCCTGGAGACGGAGGA AAGCGGGAGGAGGTGGACCGCCGAGTCCTGGAGACGGAGGA < 41bp 0.798283497728183 0.58238043160944 0.61520016 0.3501296 prediction 0.431806132237486 Functional Loss - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121203195 chr10:121203198 synonymous SNV . 0 24 hm5C_associated_SNPs_84884 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:121203154-121203211
64251 chr5 99871248 99871248 1 + A C LUAD 99871247 + 99871227 99871267 41 CGGGAACGATGAAGGCCTCGCAGTGCTGCTGCTGTCTCAGC CGGGAACGATGAAGGCCTCGCCGTGCTGCTGCTGTCTCAGC < 41bp 0.811778874392208 0.59588535643575 0.16372854 0.18111357 prediction 0.431787035912915 Functional Loss - FAM174A ENSG00000174132 CDS Human protein_coding chr5:99871247 chr5:99871248 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_84889 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:99871215-99871251
64251 chr3 141164177 141164177 1 + C T UCEC 141164174 + 141164154 141164194 41 AAACTAAAGAGATGCCCAAGCTGCAGTGTGAACTCTGTGAT AAACTAAAGAGATGCCCAAGCTGTAGTGTGAACTCTGTGAT < 41bp 0.753482933065507 0.537595745883536 0.12546533 0.09381667 prediction 0.431774374363943 Functional Loss - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141164174 chr3:141164177 stopgain 1.000 0 24 hm5C_associated_SNPs_84891 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:141164170-141164192
64251 chr15 28901061 28901061 1 + C T UCEC 28901059 + 28901039 28901079 41 GCCTGGGTGGCCAAGTTGTGCACGATGACTTTGGAGAAGTC GCCTGGGTGGCCAAGTTGTGCATGATGACTTTGGAGAAGTC < 41bp 0.841628490986155 0.625741356181761 0.08124471 0.08059573 prediction 0.431774269608789 Functional Loss - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28901059 chr15:28901061 . . 0 23 hm5C_associated_SNPs_84892 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:28901039-28901062
64251 chr12 100784796 100784796 1 + G A SKCM 100784793 + 100784773 100784813 41 TTCCAGACAGCACAGTTTAACTGGGATCCAGAAACAGTGGG TTCCAGACAGCACAGTTTAACTGAGATCCAGAAACAGTGGG < 41bp 0.73412025501871 0.518233158686367 0.39141035 0.1923495 prediction 0.431774192664685 Functional Loss - SLC17A8 ENSG00000179520 CDS Human protein_coding chr12:100784793 chr12:100784796 stopgain 1.000 1 24 hm5C_associated_SNPs_84893 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:100784785-100784807
64251 chr16 89805555 89805555 1 + C T COAD 89805553 + 89805533 89805573 41 GCACCTGCCTGACCCTTGAGCTCCAGGCTCCTGCCAGCTGG GCACCTGCCTGACCCTTGAGCTTCAGGCTCCTGCCAGCTGG < 41bp 0.821251856656409 0.605375393755964 0.34198827 0.07554698 prediction 0.43175292580089 Functional Loss - FANCA ENSG00000187741 CDS Human protein_coding chr16:89805553 chr16:89805555 nonsynonymous SNV 0.287 0 23 hm5C_associated_SNPs_84901 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:89805527-89805578
64251 chr12 53837476 53837476 1 + G T UCEC 53837473 + 53837453 53837493 41 GGACCAGCAGTGATAGTAGACAAGAAGATGCAGAAGAAAAT GGACCAGCAGTGATAGTAGACAATAAGATGCAGAAGAAAAT < 41bp 0.71587527045687 0.336353934657795 0.5244562 0.23456049 prediction 0.43175054091374 Functional Loss - PRR13 ENSG00000205352 CDS Human protein_coding chr12:53837473 chr12:53837476 stopgain 0.864 4 24 hm5C_associated_SNPs_84902 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53837435-53837476
64251 chr12 72080005 72080005 1 + G A rs532629851 72080002 + 72079982 72080022 41 GTGACTGCGTTCAGCCGCGTCGGGCGTGCTTCCCAGACTTG GTGACTGCGTTCAGCCGCGTCGGACGTGCTTCCCAGACTTG < 41bp 0.715875253418713 0.482027508622189 0.8837644 0.4054405 prediction 0.431750506837426 Functional Loss - TMEM19 ENSG00000139291 UTR5 Human protein_coding chr12:72080002 chr12:72080005 . . 0 24 hm5C_associated_SNPs_84903 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:72079978-72080014
64251 chr7 97822899 97822899 1 + A C UCEC 97822895 + 97822875 97822915 41 AAACAGAGAACTTGGAGTCTCCCGAGTGGACCTTGCATCCC AAACAGAGAACTTGGAGTCTCCCGCGTGGACCTTGCATCCC < 41bp 0.715866843678124 0.31107023613478 0.22183248 0.100314945 prediction 0.431733687356247 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822895 chr7:97822899 nonsynonymous SNV 0.950 5 25 hm5C_associated_SNPs_84905 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:97822878-97822910
64251 chr1 3831691 3831691 1 + G A rs139791976 3831688 + 3831668 3831708 41 TTGGGGTGGCAGAGGCTGAACGCGTGTGAGGTTTGGGGGAG TTGGGGTGGCAGAGGCTGAACGCATGTGAGGTTTGGGGGAG < 41bp 0.790576466573257 0.574711136711777 0.5687529 0.35626298 prediction 0.431730659722959 Functional Loss - LINC01134 ENSG00000236423 ncRNA_exonic Human lincRNA chr1:3831688 chr1:3831691 . . 0 24 hm5C_associated_SNPs_84906 0 0 1 SLTM POSTAR2 ENCODE chr1:3831669-3831747
64251 chr11 43918805 43918805 1 + C T UCEC 43918802 + 43918782 43918822 41 TGTTAGTGGAACCGCGACTGCTCCGCAGAGCTGCTGGTATG TGTTAGTGGAACCGCGACTGCTCTGCAGAGCTGCTGGTATG < 41bp 0.715860060423103 0.495372466279078 0.060605288 0.09725529 prediction 0.431720120846206 Functional Loss - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43918802 chr11:43918805 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_84907 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:43918777-43918812
64251 chr19 57723397 57723397 1 + G A UCEC 57723394 + 57723374 57723414 41 CTTGCATAACAGGAGACACACTGGAGAAAAATCCTTTGTGT CTTGCATAACAGGAGACACACTGAAGAAAAATCCTTTGTGT < 41bp 0.782169586806968 0.566310595560106 0.49213463 0.24554059 prediction 0.431717982493723 Functional Loss - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57723394 chr19:57723397 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_84910 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57723394-57723416
64251 chr9 99212630 99212630 1 + G A rs144856432 99212627 + 99212607 99212647 41 ATGCAGGAGAGTTTCGGCTGCGTGGTGGCCAACCGCTTCCA ATGCAGGAGAGTTTCGGCTGCGTAGTGGCCAACCGCTTCCA < 41bp 0.800050100514285 0.584193341981296 0.9206208 0.5224257 prediction 0.431713517065979 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99212627 chr9:99212630 synonymous SNV . 0 24 hm5C_associated_SNPs_84913 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:99212617-99212642
64251 chr2 201437334 201437334 1 + T C rs12052989 201437333 + 201437313 201437353 41 AAAAGATAAGGAAATCATCCCTGGAAACCTAGAAGACCCAA AAAAGATAAGGAAATCATCCCCGGAAACCTAGAAGACCCAA < 41bp 0.765040441617214 0.549186096503589 0.26032168 0.13854316 prediction 0.431708690227249 Functional Loss - SGO2 ENSG00000163535 CDS Human protein_coding chr2:201437333 chr2:201437334 synonymous SNV . 0 22 hm5C_associated_SNPs_84917 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:201437328-201437371
64251 chr16 86602438 86602438 1 + G A COAD 86602435 + 86602415 86602455 41 GCCCCCTACTCCTACGACTGCACGAAATACTGACGTGTCCC GCCCCCTACTCCTACGACTGCACAAAATACTGACGTGTCCC < 41bp 0.765432164868963 0.549580919370497 0.29242647 0.14865738 prediction 0.431702490996933 Functional Loss - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86602435 chr16:86602438 synonymous SNV . 0 24 hm5C_associated_SNPs_84919 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:86602396-86602445
64251 chr16 67645904 67645904 1 + C T COAD 67645901 + 67645881 67645921 41 TTTGCAGTTACACGTGTCCACGGCGTTCAAATTTGGATCGT TTTGCAGTTACACGTGTCCACGGTGTTCAAATTTGGATCGT < 41bp 0.732731411508053 0.516881701629844 0.16921511 0.080991566 prediction 0.431699419756418 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67645901 chr16:67645904 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84920 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67645855-67645948
64251 chr9 119460577 119460577 1 + C T BRCA 119460574 + 119460554 119460594 41 AGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAG AGGCAAGGTATAAAGCAGTTCTCTAGGAGTATGGGCATGAG < 41bp 0.786769886431829 0.570923277192982 0.94309783 0.8871991 prediction 0.431693218477694 Functional Loss - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460574 chr9:119460577 stopgain 0.991 1 24 hm5C_associated_SNPs_84922 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:119460561-119460582
64251 chr4 71824735 71824735 1 + C T BLCA 71824733 + 71824713 71824753 41 TGCTTCCTGAAGGGGAAGATCTCAATGAATGGGTTGCAGTT TGCTTCCTGAAGGGGAAGATCTTAATGAATGGGTTGCAGTT < 41bp 0.715845000855217 0.414407024670926 0.887292 0.2650988 prediction 0.431690001710434 Functional Loss - MOB1B ENSG00000173542 CDS Human protein_coding chr4:71824733 chr4:71824735 synonymous SNV . 0 23 hm5C_associated_SNPs_84923 0 0 6 PRPF8 POSTAR2 ENCODE chr4:71824730-71824797
64251 chr10 75013923 75013923 1 + G A rs530006768 75013920 + 75013900 75013940 41 CGGCTAAAGAACATAGTTCCCTGGGATGGAATTGGCTCTTC CGGCTAAAGAACATAGTTCCCTGAGATGGAATTGGCTCTTC < 41bp 0.71943759509206 0.503597772900534 0.26644665 0.14789325 prediction 0.43167964438305 Functional Loss - DNAJC9-AS1 ENSG00000227540 ncRNA_exonic Human antisense chr10:75013920 chr10:75013923 . . 0 24 hm5C_associated_SNPs_84925 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr10:75013923-75013924
64251 chr19 56196875 56196875 1 + C T rs75693236 56196873 + 56196853 56196893 41 AGGACTTCCAGTACGTGGACCGCGACGGCAAGGACCAGGGC AGGACTTCCAGTACGTGGACCGTGACGGCAAGGACCAGGGC < 41bp 0.715837162316015 0.428022815791473 0.07838917 0.06902897 prediction 0.43167432463203 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56196873 chr19:56196875 synonymous SNV . 0 23 hm5C_associated_SNPs_84927 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:56196821-56196892
64251 chr14 95030231 95030231 1 + C T rs140563422 95030229 + 95030209 95030249 41 CCCCGGCCATGGGCTGGAAACACGCGTGGGCAGTGCTCTGT CCCCGGCCATGGGCTGGAAACATGCGTGGGCAGTGCTCTGT < 41bp 0.827133572202264 0.611312524031079 0.36862975 0.31648612 prediction 0.43164209634237 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030229 chr14:95030231 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_84935 0 0 2 SND1 POSTAR2 ENCODE chr14:95030154-95030254
64251 chr20 43538950 43538950 1 + T C COAD 43538949 + 43538929 43538969 41 CGGCGCTCGCTGGGCTACGCCTACATCAACTTCCAGCAGCC CGGCGCTCGCTGGGCTACGCCCACATCAACTTCCAGCAGCC < 41bp 0.788423935983083 0.572611774240038 0.8934192 0.068064004 prediction 0.431624323486091 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43538949 chr20:43538950 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_84940 0 0 3 PPIG POSTAR2 ENCODE chr20:43538944-43538977
64251 chr14 38091760 38091760 1 + G A rs570411107 38091757 + 38091737 38091777 41 GCCACCCGTGAAGCGCAGAGCGCGCGGGGTCTTGGAGAGCT GCCACCCGTGAAGCGCAGAGCGCACGGGGTCTTGGAGAGCT < 41bp 0.715811081648534 0.479064021411965 0.59766525 0.40917432 prediction 0.431622163297068 Functional Loss - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38091757 chr14:38091760 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_84941 0 0 1 BUD13 POSTAR2 ENCODE chr14:38091703-38091760
64251 chr3 50615293 50615293 1 + C T COAD 50615291 + 50615271 50615311 41 ACAGGATTTGGATCATCCACCTCGACATGACCTCAGGTACC ACAGGATTTGGATCATCCACCTTGACATGACCTCAGGTACC < 41bp 0.715811043550686 0.435164683108219 0.52561367 0.1685684 prediction 0.431622087101372 Functional Loss - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50615291 chr3:50615293 synonymous SNV . 0 23 hm5C_associated_SNPs_84942 0 0 3 DDX24 POSTAR2 ENCODE chr3:50615271-50615308
64251 chr20 43058294 43058294 1 + G A SKCM 43058291 + 43058271 43058311 41 CCCAGCCGACCATCACCAAGCAGGAAGTTATCTAGCAAGCC CCCAGCCGACCATCACCAAGCAGAAAGTTATCTAGCAAGCC < 41bp 0.766535171618577 0.550733855960837 0.44196957 0.26885122 prediction 0.43160263131548 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43058291 chr20:43058294 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_84947 0 0 1 IGF2BP3 POSTAR2 ENCODE chr20:43058237-43058294
64251 chr13 111368348 111368348 1 + G C LUAD 111368347 + 111368327 111368367 41 AGGGTGGGGCCGCGCGTGGCCGTGGAAACGTGAGTGACTGG AGGGTGGGGCCGCGCGTGGCCCTGGAAACGTGAGTGACTGG < 41bp 0.715786580556685 0.411928429878971 0.34055477 0.21880925 prediction 0.43157316111337 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111368347 chr13:111368348 synonymous SNV . 0 22 hm5C_associated_SNPs_84953 0 0 1 NONO POSTAR2 ENCODE chr13:111368332-111368375
64251 chr19 50905323 50905323 1 + C T COAD 50905321 + 50905301 50905341 41 TGGCCATCAGCCGGGACAGTCGCGGGGGGAGGGAGCTGACT TGGCCATCAGCCGGGACAGTCGTGGGGGGAGGGAGCTGACT < 41bp 0.832308247397092 0.616530262025902 0.92644584 0.9233097 prediction 0.43155597074238 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905321 chr19:50905323 synonymous SNV . 0 23 hm5C_associated_SNPs_84960 1 0 8 BUD13 POSTAR2 ENCODE chr19:50905323-50905363
64251 chr8 21905490 21905490 1 + C T COAD 21905487 + 21905467 21905507 41 CCCAGCGGGAAGAGCAAAGACTGCGTGTTCACGGAGATCGT CCCAGCGGGAAGAGCAAAGACTGTGTGTTCACGGAGATCGT < 41bp 0.741674394999793 0.525899326617436 0.20571458 0.16077614 prediction 0.431550136764714 Functional Loss - FGF17 ENSG00000158815 CDS Human protein_coding chr8:21905487 chr8:21905490 synonymous SNV . 0 24 hm5C_associated_SNPs_84963 0 0 1 DGCR8 POSTAR2 ENCODE chr8:21905478-21905509
64251 chr1 52231512 52231512 1 + C T LUSC 52231509 + 52231489 52231529 41 CCTAGGCAGTGGCCATTCACCACCGAGTAGCAGTCTCACTT CCTAGGCAGTGGCCATTCACCACTGAGTAGCAGTCTCACTT < 41bp 0.732899884157988 0.517126182786215 0.23849028 0.11704689 prediction 0.431547402743546 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52231509 chr1:52231512 stopgain 0.965 3 24 hm5C_associated_SNPs_84965 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:52231506-52231542
64251 chr11 45827680 45827680 1 + G A SKCM 45827677 + 45827657 45827697 41 TGGACTTCCCCAGCTTGCGCCTGGACCTCAGGGTGGCCCGC TGGACTTCCCCAGCTTGCGCCTGAACCTCAGGGTGGCCCGC < 41bp 0.715763436338588 0.465463808669776 0.37468344 0.17023048 prediction 0.431526872677177 Functional Loss - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45827677 chr11:45827680 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_84973 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:45827675-45827687
64251 chr1 26497118 26497118 1 + G T SARC 26497116 + 26497096 26497136 41 TCAGGAAGAGGCGGAGAGGGCAGCGGGTATGGGATCCTATG TCAGGAAGAGGCGGAGAGGGCATCGGGTATGGGATCCTATG < 41bp 0.902519169286715 0.686757452437162 0.8536711 0.3879071 prediction 0.431523433699107 Functional Loss - ZNF593 ENSG00000142684 CDS Human protein_coding chr1:26497116 chr1:26497118 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_84976 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr1:26497073-26497136
64251 chr12 121004724 121004724 1 + C T GBM 121004722 + 121004702 121004742 41 TCTGCTTTGGGTCCCACCAGCACCGAGGGCCATGGGGCCCT TCTGCTTTGGGTCCCACCAGCATCGAGGGCCATGGGGCCCT < 41bp 0.715757860104559 0.424966100766761 0.17343354 0.12343016 prediction 0.431515720209118 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121004722 chr12:121004724 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_84979 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:121004707-121004745
64251 chr11 47311461 47311461 1 + G A GBM 47311458 + 47311438 47311478 41 AGGAGGTGGTGCACAGCGTGCTGGACGGCCAGGGAGTTGGC AGGAGGTGGTGCACAGCGTGCTGAACGGCCAGGGAGTTGGC < 41bp 0.715757275472985 0.478690826134115 0.30140418 0.18429956 prediction 0.43151455094597 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47311458 chr11:47311461 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_84980 0 0 6 DDX24 POSTAR2 ENCODE chr11:47311424-47311489
64251 chr2 48010322 48010322 1 + G C rs375109921 48010318 + 48010298 48010338 41 CAGGAGCCGCGCGGTAGATGCGGTGCTTTTAGGAGCTCCGT CAGGAGCCGCGCGGTAGATGCGGTCCTTTTAGGAGCTCCGT < 41bp 0.762146983376338 0.546390732978883 0.8893002 0.8703797 prediction 0.43151250079491 Functional Loss - MSH6 ENSG00000116062 UTR5 Human protein_coding chr2:48010318 chr2:48010322 . . 0 25 hm5C_associated_SNPs_84981 0 0 21 FMR1 POSTAR2 GSE39682,GSM977616 chr2:48010311-48010398
64251 chr16 31091101 31091101 1 + C T UCEC 31091099 + 31091079 31091119 41 GGCAAGCAGAAGTCGAGAAGCTCCAGGAAGAACTTAAAGTG GGCAAGCAGAAGTCGAGAAGCTTCAGGAAGAACTTAAAGTG < 41bp 0.715754143839732 0.450196865003856 0.8854195 0.2588079 prediction 0.431508287679464 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31091099 chr16:31091101 synonymous SNV . 0 23 hm5C_associated_SNPs_84982 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:31091100-31091120
64251 chr10 43883066 43883066 1 - G A UCEC 43883068 - 43883048 43883088 41 ACATTGAGGTGTTCAAGTCCCACAGAACCGAGATGGATTGG ACATTGAGGTGTTCAAGTCCCATAGAACCGAGATGGATTGG < 41bp 0.715751402345441 0.444765412202256 0.046731472 0.13408855 prediction 0.431502804690882 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43883068 chr10:43883066 synonymous SNV . 0 23 hm5C_associated_SNPs_84983 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:43883011-43883098
64251 chr9 82333722 82333722 1 + C T COAD 82333720 + 82333700 82333740 41 CCTCATCGGACCTGGAATCCCCCGGCATGCTCGCCAGATCA CCTCATCGGACCTGGAATCCCCTGGCATGCTCGCCAGATCA < 41bp 0.715741657245803 0.437037557363809 0.17490384 0.11655262 prediction 0.431483314491606 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82333720 chr9:82333722 nonsynonymous SNV 0.520 4 23 hm5C_associated_SNPs_84996 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:82333702-82333726
64251 chr15 79186521 79186521 1 + G A UCEC 79186518 + 79186498 79186538 41 CTGAAATTCTTGCAGATCATCCCGATGCACCCATGTCCCAG CTGAAATTCTTGCAGATCATCCCAATGCACCCATGTCCCAG < 41bp 0.785447070992202 0.56970819331672 0.012723535 0.0063975155 prediction 0.431477755350964 Functional Loss - MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79186518 chr15:79186521 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_84998 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:79186475-79186523
64251 chr16 72821625 72821625 1 + C T rs201772357 72821623 + 72821603 72821643 41 GCCGCCGCCGCCGCCACCGCCGCCGCCGCCGCCACTGCCAC GCCGCCGCCGCCGCCACCGCCGTCGCCGCCGCCACTGCCAC < 41bp 0.753790735714171 0.538052094857908 0.87447053 0.73566854 prediction 0.431477281712525 Functional Loss - ZFHX3 ENSG00000140836 CDS Human protein_coding chr16:72821623 chr16:72821625 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_84999 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:72821624-72821625
64251 chr1 110882243 110882243 1 + G A BLCA 110882240 + 110882220 110882260 41 ACTTCCCGCGGTGAGCGGAGCAAGAAGTTAGGGGGCTCTGG ACTTCCCGCGGTGAGCGGAGCAAAAAGTTAGGGGGCTCTGG < 41bp 0.715731614594032 0.496241196462089 0.8850558 0.4126649 prediction 0.431463229188063 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882240 chr1:110882243 synonymous SNV . 0 24 hm5C_associated_SNPs_85005 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:110882209-110882259
64251 chr19 34872421 34872421 1 + G A UCEC 34872418 + 34872398 34872438 41 CCTCAAAACATGTTCGAGTTCTGGGATGTAAGTACAAGCAC CCTCAAAACATGTTCGAGTTCTGAGATGTAAGTACAAGCAC < 41bp 0.780588328953894 0.56485731381014 0.037854463 0.036012232 prediction 0.431462030287507 Functional Loss - GPI ENSG00000105220 CDS Human protein_coding chr19:34872418 chr19:34872421 stopgain 1.000 1 24 hm5C_associated_SNPs_85006 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34872350-34872437
64251 chr19 17387585 17387585 1 + G A rs10416551 17387582 + 17387562 17387602 41 GGGGAGCTATAGTCATGGGGCACGGGGTGACCCAAGCCCCA GGGGAGCTATAGTCATGGGGCACAGGGTGACCCAAGCCCCA < 41bp 0.802812430913062 0.587081573768115 0.5517368 0.31611365 prediction 0.431461714289893 Functional Loss - BABAM1 ENSG00000105393;ENSG00000130307;ENSG00000269307 intronic Human other chr19:17387582 chr19:17387585 . . 0 24 hm5C_associated_SNPs_85007 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:17387560-17387620
64251 chr4 1388350 1388350 1 + G A THCA 1388347 + 1388327 1388367 41 GTGGAGTGCCCGCCTGCTCACACGTGCCCATGTGGAGTGCC GTGGAGTGCCCGCCTGCTCACACATGCCCATGTGGAGTGCC < 41bp 0.809866355734545 0.594144414145925 0.124216974 0.06899735 prediction 0.43144388317724 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388347 chr4:1388350 synonymous SNV . 0 24 hm5C_associated_SNPs_85013 0 0 2 DROSHA POSTAR2 ENCODE chr4:1388298-1388407
64251 chr4 41992752 41992752 1 + G C rs16853872 41992748 + 41992728 41992768 41 GCTCCGTCTGCGATGCAGGGCGGCGGCCTGTAATCCCAGCG GCTCCGTCTGCGATGCAGGGCGGCCGCCTGTAATCCCAGCG < 41bp 0.848518685979533 0.632802218357202 0.45125085 0.32280576 prediction 0.431432935244661 Functional Loss - SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:41992748 chr4:41992752 synonymous SNV . 0 25 hm5C_associated_SNPs_85014 0 0 5 DDX3X POSTAR2 ENCODE chr4:41992722-41992777
64251 chr2 112740514 112740514 1 + G A CESC 112740511 + 112740491 112740531 41 TGAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGTGGGC TGAAGCCTCCGACTAAGCAGCAGAATGGAGAACTGGTGGGC < 41bp 0.821612597917235 0.605903867684935 0.6724415 0.34598345 prediction 0.431417460464601 Functional Loss - MERTK ENSG00000153208 CDS Human protein_coding chr2:112740511 chr2:112740514 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_85019 0 0 5 BUD13 POSTAR2 ENCODE chr2:112740497-112740569
64251 chr4 109578780 109578780 1 + A T BLCA 109578776 + 109578756 109578796 41 CCTATTGAGTTTTTTCATGGCTAGAGTATTCATGAGAATGA CCTATTGAGTTTTTTCATGGCTAGTGTATTCATGAGAATGA < 41bp 0.715704988502169 0.387064804751339 0.11960074 0.08996871 prediction 0.431409977004337 Functional Loss - OSTC ENSG00000198856 CDS Human protein_coding chr4:109578776 chr4:109578780 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_85022 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:109578738-109578781
64251 chr10 103921612 103921612 1 + C T SKCM 103921609 + 103921589 103921629 41 GGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGGG GGGAGAAAAAAGGGCATCATCCCTATTCCGAAGGGTCAGGG < 41bp 0.71569607502323 0.475515312244101 0.07162559 0.044911295 prediction 0.431392150046459 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103921609 chr10:103921612 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_85029 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103921580-103921660
64251 chr10 103921611 103921611 1 + C T SKCM 103921609 + 103921589 103921629 41 GGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGGG GGGAGAAAAAAGGGCATCATCCTCATTCCGAAGGGTCAGGG < 41bp 0.71569607502323 0.40735568613876 0.07162559 0.11659035 prediction 0.431392150046459 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103921609 chr10:103921611 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_85030 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103921580-103921660
64251 chr10 103921613 103921613 1 + A T THCA 103921609 + 103921589 103921629 41 GGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGGG GGGAGAAAAAAGGGCATCATCCCCTTTCCGAAGGGTCAGGG < 41bp 0.71569607502323 0.358258258568813 0.07162559 0.053861767 prediction 0.431392150046459 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103921609 chr10:103921613 synonymous SNV . 0 25 hm5C_associated_SNPs_85031 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103921580-103921660
64251 chr21 37783840 37783840 1 + G T LUSC 37783838 + 37783818 37783858 41 CCGTGCTTCTGTATGACACCCAGCAGTCCTTCCCTTTTGGT CCGTGCTTCTGTATGACACCCATCAGTCCTTCCCTTTTGGT < 41bp 0.715690358932863 0.362139852932786 0.3452766 0.1163142 prediction 0.431380717865726 Functional Loss - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37783838 chr21:37783840 nonsynonymous SNV 0.878 4 23 hm5C_associated_SNPs_85035 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:37783832-37783856
64251 chr16 29820871 29820871 1 + G A CESC 29820868 + 29820848 29820888 41 CACCCCCCAATAGGCTTCACCACGGCAGCATACCTGCGCAT CACCCCCCAATAGGCTTCACCACAGCAGCATACCTGCGCAT < 41bp 0.715686416932013 0.474482246279362 0.38981572 0.41759253 prediction 0.431372833864025 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820868 chr16:29820871 synonymous SNV . 0 24 hm5C_associated_SNPs_85037 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:29820858-29820915
64251 chr1 192778238 192778238 1 + T C UCEC 192778237 + 192778217 192778257 41 TTCTTGGCTGTTCAACACGACTGCAGACCCATGGACAAGAG TTCTTGGCTGTTCAACACGACCGCAGACCCATGGACAAGAG < 41bp 0.799192036455286 0.583512648156963 0.20439121 0.100351155 prediction 0.431358776596645 Functional Loss - RGS2 ENSG00000116741 CDS Human protein_coding chr1:192778237 chr1:192778238 nonsynonymous SNV 0.713 3 22 hm5C_associated_SNPs_85041 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:192778205-192778245
64251 chr1 228335194 228335194 1 + C T STAD 228335191 + 228335171 228335211 41 GGTGTGCGGAACATCAAGGCCACCGATCTGCGGCCCATCTA GGTGTGCGGAACATCAAGGCCACTGATCTGCGGCCCATCTA < 41bp 0.734909565909901 0.519231625011069 0.21930048 0.29465866 prediction 0.431355881797664 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228335191 chr1:228335194 synonymous SNV . 0 24 hm5C_associated_SNPs_85042 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:228335130-228335194
64251 chr20 3005196 3005196 1 + G A PRAD 3005193 + 3005173 3005213 41 CAGAACTGGAAGTGACCTCTCTAGAAACCCACCTGCAGAAA CAGAACTGGAAGTGACCTCTCTAAAAACCCACCTGCAGAAA < 41bp 0.775540125022646 0.559864425815595 0.13635483 0.019348145 prediction 0.431351398414102 Functional Loss - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3005193 chr20:3005196 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_85046 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:3005139-3005200
64251 chr1 155106439 155106439 1 + G A rs114708813 155106436 + 155106416 155106456 41 CCTCTCACCTTGCAGATGACCCAGAGGTGCGGGTTCTACAT CCTCTCACCTTGCAGATGACCCAAAGGTGCGGGTTCTACAT < 41bp 0.78941662586451 0.573742107564788 0.82199347 0.18391323 prediction 0.431349036599444 Functional Loss - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106436 chr1:155106439 nonsynonymous SNV 0.967 1 24 hm5C_associated_SNPs_85047 0 0 10 BUD13 POSTAR2 ENCODE chr1:155106425-155106441
64251 chr22 32215055 32215055 1 + C T SKCM 32215053 + 32215033 32215073 41 ACCACAGCGAGACTCCAGTGCACCAGGGAGGTTTCACGTTG ACCACAGCGAGACTCCAGTGCATCAGGGAGGTTTCACGTTG < 41bp 0.715661016671079 0.436667006938307 0.73042107 0.7062162 prediction 0.431322033342157 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32215053 chr22:32215055 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_85056 0 0 1 TBRG4 POSTAR2 ENCODE chr22:32215022-32215067
64251 chr14 24113713 24113713 1 + C T COAD 24113710 + 24113690 24113730 41 CCCAAGGACATCCGGGTAAACTGCGTGGTTCCAGGAATTAT CCCAAGGACATCCGGGTAAACTGTGTGGTTCCAGGAATTAT < 41bp 0.738897955266251 0.52323942934703 0.65373856 0.11353403 prediction 0.431317051838441 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113710 chr14:24113713 synonymous SNV . 0 24 hm5C_associated_SNPs_85058 0 0 5 GRWD1 POSTAR2 ENCODE chr14:24113697-24113722
64251 chr11 17316912 17316912 1 + G A LUAD 17316909 + 17316889 17316929 41 CTGCTACAGTATTGCTTTCTCTTGATTACATGTTTACTTAC CTGCTACAGTATTGCTTTCTCTTAATTACATGTTTACTTAC < 41bp 0.72858202517204 0.512935710772835 0.06389579 0.051862597 prediction 0.431292628798411 Functional Loss - NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17316909 chr11:17316912 synonymous SNV . 0 24 hm5C_associated_SNPs_85061 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:17316891-17316920
64251 chr2 20647689 20647689 1 + G C BLCA 20647685 + 20647665 20647705 41 ATGGCCGTGCGCATCCAAGCCTACGACTACCTCGAGTGCTC ATGGCCGTGCGCATCCAAGCCTACCACTACCTCGAGTGCTC < 41bp 0.715644636462643 0.440107586507686 0.11226183 0.093637615 prediction 0.431289272925286 Functional Loss - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647685 chr2:20647689 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_85063 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:20647668-20647698
64251 chr10 14893264 14893264 1 + G A UCEC 14893261 + 14893241 14893281 41 TTAATGTTTTGCGATTAATTCACGAACCGTCTGCAGCTCTT TTAATGTTTTGCGATTAATTCACAAACCGTCTGCAGCTCTT < 41bp 0.765185772951905 0.549544393457968 0.3056582 0.04984632 prediction 0.431282758987874 Functional Loss - HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14893261 chr10:14893264 nonsynonymous SNV 0.970 4 24 hm5C_associated_SNPs_85066 0 0 11 CSTF2 POSTAR2 GSE37401,GSM917676 chr10:14893242-14893266
64251 chr1 32503558 32503558 1 + C T SARC 32503555 + 32503535 32503575 41 CCCACCTACTGTGAGGGGTGCTCCAGCACCAAGAGCACGGA CCCACCTACTGTGAGGGGTGCTCTAGCACCAAGAGCACGGA < 41bp 0.775103933302876 0.559463453221595 0.35927695 0.27037394 prediction 0.431280960162562 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32503555 chr1:32503558 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_85067 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32503497-32503558
64251 chr19 39906077 39906077 1 + C T UCEC 39906074 + 39906054 39906094 41 ATTGAGGACATCTACGAGTTCAGCAGGTCAGGGGCAGGGGG ATTGAGGACATCTACGAGTTCAGTAGGTCAGGGGCAGGGGG < 41bp 0.72529366665809 0.509654317910067 0.7593534 0.73273927 prediction 0.431278697496047 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39906074 chr19:39906077 synonymous SNV . 0 24 hm5C_associated_SNPs_85069 0 0 4 DDX24 POSTAR2 ENCODE chr19:39906002-39906080
64251 chr11 117053326 117053326 1 + A C CESC 117053325 + 117053305 117053345 41 CCTGCTCAGTCATCTCCATTCAGGATGTGCTGGTGAGTTGC CCTGCTCAGTCATCTCCATTCCGGATGTGCTGGTGAGTTGC < 41bp 0.836253684354031 0.620615301919377 0.94592285 0.93366593 prediction 0.431276764869307 Functional Loss - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117053325 chr11:117053326 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_85070 0 0 1 PRPF8 POSTAR2 ENCODE chr11:117053318-117053370
64251 chr11 108535928 108535928 1 + G A UCEC 108535925 + 108535905 108535945 41 GGTTCGGGAGCCCGACCCGACCCGGTGCGGAGCTTCAATCG GGTTCGGGAGCCCGACCCGACCCAGTGCGGAGCTTCAATCG < 41bp 0.715636298927 0.469849650901827 0.31734523 0.20703173 prediction 0.431272597853999 Functional Loss - DDX10 ENSG00000178105 CDS Human protein_coding chr11:108535925 chr11:108535928 synonymous SNV . 0 24 hm5C_associated_SNPs_85072 0 0 2 EIF3H POSTAR2 ENCODE chr11:108535833-108535936
64251 chr20 61909542 61909542 1 + G A rs148044740 61909539 + 61909519 61909559 41 AAGACTGGCTGAATGATGACCTCGGCTCCTATCAAGGGTAA AAGACTGGCTGAATGATGACCTCAGCTCCTATCAAGGGTAA < 41bp 0.715629053842371 0.472666076135046 0.1942727 0.11798057 prediction 0.431258107684742 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61909539 chr20:61909542 nonsynonymous SNV 0.731 2 24 hm5C_associated_SNPs_85077 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:61909490-61909548
64251 chrX 135084290 135084290 1 + G A UCEC 135084287 + 135084267 135084307 41 TGACTGTTCTTGCTATATTCCACGAGCTTCAAGTTGATGTT TGACTGTTCTTGCTATATTCCACAAGCTTCAAGTTGATGTT < 41bp 0.715625866678372 0.481181241749431 0.075930536 0.09230313 prediction 0.431251733356744 Functional Loss - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135084287 chrX:135084290 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_85079 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:135084279-135084299
64251 chrX 129058965 129058965 1 + G A UCEC 129058962 + 129058942 129058982 41 GAGTACAGACGCTGGAAGAGCTAGAAGAGCTGGGAAAAGAA GAGTACAGACGCTGGAAGAGCTAAAAGAGCTGGGAAAAGAA < 41bp 0.799153555000272 0.583537861772945 0.24222884 0.31699824 prediction 0.431231386454654 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129058962 chrX:129058965 nonsynonymous SNV 0.947 0 24 hm5C_associated_SNPs_85082 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:129058906-129058972
64251 chr12 7026224 7026224 1 + A T SKCM 7026220 + 7026200 7026240 41 AGGGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAACCTG AGGGTCTCTCTGTGGTGGAGCAAGTGAAACTGGACAACCTG < 41bp 0.715614675308559 0.396854204153899 0.90871847 0.9112362 prediction 0.431229350617118 Functional Loss - ENO2 ENSG00000111674 CDS Human protein_coding chr12:7026220 chr12:7026224 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_85085 0 0 19 TARDBP POSTAR2 DRA001158,DRS012386 chr12:7026207-7026262
64251 chrX 105855611 105855611 1 + G C LUAD 105855607 + 105855587 105855627 41 TATTGCTATGATGTGACGATCTCAGATGGGGTGTACCAGGA TATTGCTATGATGTGACGATCTCACATGGGGTGTACCAGGA < 41bp 0.715614450517098 0.4176404710461 0.1616787 0.049764186 prediction 0.431228901034195 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105855607 chrX:105855611 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_85086 0 0 1 HNRNPA1 POSTAR2 GSE34996,GSM859978-GSM859979-GSM859980-GSM859981 chrX:105855600-105855620
64251 chr19 7712333 7712333 1 + G A COAD 7712330 + 7712310 7712350 41 TATGTCATGGGCGGTGTGGCCATGTCAGAGATGAGGGCCGC TATGTCATGGGCGGTGTGGCCATATCAGAGATGAGGGCCGC < 41bp 0.728807778582117 0.513193906322569 0.5041291 0.3780642 prediction 0.431227744519096 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7712330 chr19:7712333 nonsynonymous SNV 0.963 2 24 hm5C_associated_SNPs_85087 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7712315-7712335
64251 chr10 13234328 13234328 1 + G A rs141376818 13234325 + 13234305 13234345 41 GACCTGCCGACGTGTGGAGCCAGGAACTTAAAACAACATTT GACCTGCCGACGTGTGGAGCCAGAAACTTAAAACAACATTT < 41bp 0.77718978120854 0.561580177919878 0.07641104 0.067349374 prediction 0.431219206577324 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13234325 chr10:13234328 synonymous SNV . 0 24 hm5C_associated_SNPs_85090 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:13234300-13234329
64251 chr17 78082367 78082367 1 + C T UCEC 78082365 + 78082345 78082385 41 ACTCCTCCACCGCTATCACCCGCCAGGTGGTGGAGAACATG ACTCCTCCACCGCTATCACCCGTCAGGTGGTGGAGAACATG < 41bp 0.847023186327785 0.631414524144838 0.7590587 0.39353994 prediction 0.431217324365894 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78082365 chr17:78082367 synonymous SNV . 0 23 hm5C_associated_SNPs_85091 0 0 1 RPS3 POSTAR2 ENCODE chr17:78082311-78082379
64251 chr17 4047119 4047119 1 + C T UCEC 4047117 + 4047097 4047137 41 CGCAGCAGCGGTAATGGCAGCACGGCTTATGGGCTGGTGGG CGCAGCAGCGGTAATGGCAGCATGGCTTATGGGCTGGTGGG < 41bp 0.760273606551817 0.544674014343363 0.29699978 0.35985088 prediction 0.431199184416909 Functional Loss - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4047117 chr17:4047119 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_85097 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr17:4047113-4047136
64251 chr1 161199675 161199675 1 + C T LUSC 161199672 + 161199652 161199692 41 ACCCGTAGGCCTCATTAATGCTCCGGAGCTCAGCCAGCAGG ACCCGTAGGCCTCATTAATGCTCTGGAGCTCAGCCAGCAGG < 41bp 0.744598618083569 0.529005591645911 0.11189929 0.22490132 prediction 0.431186052875317 Functional Loss - NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199672 chr1:161199675 nonsynonymous SNV 0.958 5 24 hm5C_associated_SNPs_85101 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:161199660-161199680
64251 chr20 334056 334056 1 + C T COAD 334054 + 334034 334074 41 GTGGCAGCTGGAGTTCTGCTCGCCATCTGCCTCTTCTGGGC GTGGCAGCTGGAGTTCTGCTCGTCATCTGCCTCTTCTGGGC < 41bp 0.843954415970999 0.628364842041853 0.70844007 0.28591526 prediction 0.431179147858293 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334054 chr20:334056 nonsynonymous SNV 0.871 2 23 hm5C_associated_SNPs_85103 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:334046-334077
64251 chr6 16290783 16290783 1 + T C COAD 16290782 + 16290762 16290802 41 TTGAGAGGAACGGACGGAAGCTCAAGCTCTTCTACGGGATG TTGAGAGGAACGGACGGAAGCCCAAGCTCTTCTACGGGATG < 41bp 0.715584274467553 0.450170013229849 0.36278963 0.22415873 prediction 0.431168548935105 Functional Loss - GMPR ENSG00000137198 CDS Human protein_coding chr6:16290782 chr6:16290783 nonsynonymous SNV 0.929 3 22 hm5C_associated_SNPs_85105 0 0 4 LIN28B POSTAR2 ENCODE chr6:16290726-16290783
64251 chr1 227920368 227920368 1 - T G STAD 227920372 - 227920352 227920392 41 CTTCCCTCTGCCCAGGTCATCATGAGGTCCTGCTCGGGCAT CTTCCCTCTGCCCAGGTCATCATGCGGTCCTGCTCGGGCAT < 41bp 0.715577521149945 0.325272143457733 0.5176896 0.42874134 prediction 0.431155042299889 Functional Loss - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227920372 chr1:227920368 synonymous SNV . 0 25 hm5C_associated_SNPs_85111 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:227920352-227920379
64251 chr16 90034378 90034378 1 + G C rs80226537 90034374 + 90034354 90034394 41 GCACCTTGTGGAAGACCACACATGGGTGGTCCCACAGCATG GCACCTTGTGGAAGACCACACATGCGTGGTCCCACAGCATG < 41bp 0.715574809727429 0.480522973223874 0.8743379 0.32872546 prediction 0.431149619454857 Functional Loss - DEF8 ENSG00000140995 UTR3 Human protein_coding chr16:90034374 chr16:90034378 . . 0 25 hm5C_associated_SNPs_85112 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:90034364-90034390
64251 chr1 26888016 26888016 1 + C T UCEC 26888014 + 26887994 26888034 41 AGGTGTATGATGATGGCAAACACGTGTACCTGGTGACAGAG AGGTGTATGATGATGGCAAACATGTGTACCTGGTGACAGAG < 41bp 0.715573675542372 0.430701442114132 0.386687 0.32169867 prediction 0.431147351084743 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26888014 chr1:26888016 synonymous SNV . 0 23 hm5C_associated_SNPs_85114 0 0 1 DDX24 POSTAR2 ENCODE chr1:26888012-26888078
64251 chr16 50067410 50067410 1 + C T UCEC 50067408 + 50067388 50067428 41 AATACACAAGAGAGTAGTTGCACCATCAATGTATCCTTTAC AATACACAAGAGAGTAGTTGCATCATCAATGTATCCTTTAC < 41bp 0.715572421066147 0.437490351487017 0.05493352 0.14490157 prediction 0.431144842132293 Functional Loss - CNEP1R1 ENSG00000205423 CDS Human protein_coding chr16:50067408 chr16:50067410 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_85115 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:50067406-50067444
64251 chr10 89472990 89472990 1 + C T STAD 89472987 + 89472967 89473007 41 GGGACAGAGAGGAAAATATCCGCCGGATTGCTGAGGTGGCT GGGACAGAGAGGAAAATATCCGCTGGATTGCTGAGGTGGCT < 41bp 0.755332875050818 0.539760582987206 0.36705828 0.328189 prediction 0.431144584127224 Functional Loss - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89472987 chr10:89472990 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_85116 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:89472978-89473006
64251 chr17 27183332 27183332 1 + C T LUAD 27183330 + 27183310 27183350 41 CCCTGATATGCCTGAGAATTCCCGGGTCCTACGAGTGGTCC CCCTGATATGCCTGAGAATTCCTGGGTCCTACGAGTGGTCC < 41bp 0.837965905518009 0.622393699999048 0.8364209 0.32085204 prediction 0.431144411037923 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27183330 chr17:27183332 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_85117 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:27183316-27183347
64251 chr1 9655965 9655965 1 + C T rs80180768 9655963 + 9655943 9655983 41 CACAGGATGAAGCCAACGCACACGATGGTCAACTGCTGGTT CACAGGATGAAGCCAACGCACATGATGGTCAACTGCTGGTT < 41bp 0.843752110835817 0.628181544717871 0.15627885 0.3361318 prediction 0.431141132235893 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9655963 chr1:9655965 nonsynonymous SNV 0.889 0 23 hm5C_associated_SNPs_85120 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:9655964-9655995
64251 chr2 120194596 120194596 1 + C T SKCM 120194594 + 120194574 120194614 41 CCATTTGTGATGGGCACTGGCTCCTGGCTGAGGACCGCCTC CCATTTGTGATGGGCACTGGCTTCTGGCTGAGGACCGCCTC < 41bp 0.715568491502587 0.444734728572275 0.37065083 0.13554516 prediction 0.431136983005173 Functional Loss - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194594 chr2:120194596 nonsynonymous SNV 0.120 0 23 hm5C_associated_SNPs_85121 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:120194587-120194650
64251 chr7 155099990 155099990 1 + A C COAD 155099986 + 155099966 155100006 41 CCCCATAGTGATTGAGTCTTCAAAACCACCGATTCTGAGAG CCCCATAGTGATTGAGTCTTCAAACCCACCGATTCTGAGAG < 41bp 0.71556325510397 0.321695190772728 0.40117383 0.51642346 prediction 0.43112651020794 Functional Loss - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155099986 chr7:155099990 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_85125 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:155099960-155100020
64251 chr21 45719984 45719984 1 + C T rs550375523 45719982 + 45719962 45720002 41 AGCTGGGCCCGTGTTTCGGCCGCCGCCATGGCCGCGGTGGA AGCTGGGCCCGTGTTTCGGCCGTCGCCATGGCCGCGGTGGA < 41bp 0.739420480327166 0.523860121105263 0.24863848 0.26876807 prediction 0.431120718443806 Functional Loss - PFKL ENSG00000141959 UTR5 Human protein_coding chr21:45719982 chr21:45719984 . . 0 23 hm5C_associated_SNPs_85127 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:45719940-45720020
64251 chr5 14488246 14488246 1 + G C HNSC 14488245 + 14488225 14488265 41 ACCCGGCTCCTTCACCTTCCCGGGGGACAGCGACTCCCTCC ACCCGGCTCCTTCACCTTCCCCGGGGACAGCGACTCCCTCC < 41bp 0.852500972435297 0.636944089078778 0.9530735 0.9405133 prediction 0.431113766713038 Functional Loss - TRIO ENSG00000038382 CDS Human protein_coding chr5:14488245 chr5:14488246 synonymous SNV . 0 22 hm5C_associated_SNPs_85128 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:14488234-14488257
64251 chr3 183862407 183862407 1 + T C LIHC 183862406 + 183862386 183862426 41 TACTGATGGCTTTCTACCAGCTGGAGATCCTGGCTGAGGAA TACTGATGGCTTTCTACCAGCCGGAGATCCTGGCTGAGGAA < 41bp 0.824043700401058 0.608487571598119 0.8613005 0.8950535 prediction 0.431112257605877 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183862406 chr3:183862407 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_85129 0 0 2 GRWD1 POSTAR2 ENCODE chr3:183862383-183862465
64251 chr8 67832566 67832566 1 + C T rs138254949 67832564 + 67832544 67832584 41 TGGCACTGCAACCTCCACCTCCCGGGTTCAAGTGATTCTCC TGGCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCC < 41bp 0.715550029229485 0.476622239587582 0.123897254 0.07862514 prediction 0.431100058458971 Functional Loss - MCMDC2 ENSG00000178460 UTR3 Human protein_coding chr8:67832564 chr8:67832566 . . 0 23 hm5C_associated_SNPs_85132 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:67832542-67832569
64251 chr15 58840557 58840557 1 + C T rs146299102 58840555 + 58840535 58840575 41 CCCAGACCATAAAATGCTCCCACGAGCGATCGGTGCACCTT CCCAGACCATAAAATGCTCCCATGAGCGATCGGTGCACCTT < 41bp 0.863487214981329 0.647945350535256 0.16511747 0.121223 prediction 0.431083728892147 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58840555 chr15:58840557 synonymous SNV . 0 23 hm5C_associated_SNPs_85136 0 0 1 SND1 POSTAR2 ENCODE chr15:58840527-58840560
64251 chr16 3165365 3165365 1 - C T LUSC 3165368 - 3165348 3165388 41 CATTTCCTGATGAGGATGTCCACGATCTGGAACCTAGAAAG CATTTCCTGATGAGGATGTCCACAATCTGGAACCTAGAAAG < 41bp 0.796218236160992 0.580681844724769 0.15727237 0.12263203 prediction 0.431072782872446 Functional Loss - ZNF205 ENSG00000122386 CDS Human protein_coding chr16:3165368 chr16:3165365 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_85140 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:3165364-3165388
64251 chr19 2248020 2248020 1 + G A rs60862139 2248017 + 2247997 2248037 41 CCAGCTCCAGGGGTCCACCCCCCGGCCCCAGTGGTGCATCC CCAGCTCCAGGGGTCCACCCCCCAGCCCCAGTGGTGCATCC < 41bp 0.715534683958583 0.467163502820458 0.38255215 0.34884417 prediction 0.431069367917166 Functional Loss - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2248017 chr19:2248020 synonymous SNV . 0 24 hm5C_associated_SNPs_85141 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:2247985-2248043
64251 chr21 22696798 22696798 1 + G T COAD 22696796 + 22696776 22696816 41 CTGCAGGGCCTCAGGCTCTCCAGAACCCGCCATCTCCTGGT CTGCAGGGCCTCAGGCTCTCCATAACCCGCCATCTCCTGGT < 41bp 0.715526730857207 0.373987486225749 0.37828487 0.0884195 prediction 0.431053461714415 Functional Loss - NCAM2 ENSG00000154654 CDS Human protein_coding chr21:22696796 chr21:22696798 stopgain 0.418 0 23 hm5C_associated_SNPs_85148 0 0 3 FMR1 POSTAR2 ENCODE chr21:22696746-22696819
64251 chr18 21059323 21059323 1 + G A KIRC 21059320 + 21059300 21059340 41 TCAAGGAAGCCCTTAGTGAACGAGAACTCTTCAATGCTGTT TCAAGGAAGCCCTTAGTGAACGAAAACTCTTCAATGCTGTT < 41bp 0.748335742513612 0.532818983715805 0.12765947 0.03898868 prediction 0.431033517595615 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21059320 chr18:21059323 nonsynonymous SNV 0.945 2 24 hm5C_associated_SNPs_85152 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr18:21059301-21059348
64251 chr9 738479 738479 1 + G T GBM 738476 + 738456 738496 41 AGCGTGTCCCACTCCAACTTCGAGATTGTGAAGCTGCTGTT AGCGTGTCCCACTCCAACTTCGATATTGTGAAGCTGCTGTT < 41bp 0.715515119132131 0.348191129241465 0.38123313 0.27099162 prediction 0.431030238264261 Functional Loss - KANK1 ENSG00000107104 CDS Human protein_coding chr9:738476 chr9:738479 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_85153 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:738455-738482
64251 chr12 69652453 69652453 1 + C T BLCA 69652450 + 69652430 69652470 41 CTCCACCTCCTGGTCAGGTTCTGCCTCCTCCTCTAGCTGGG CTCCACCTCCTGGTCAGGTTCTGTCTCCTCCTCTAGCTGGG < 41bp 0.717105195551184 0.501593408947795 0.21280113 0.2125575 prediction 0.431023573206779 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652450 chr12:69652453 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_85155 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:69652362-69652559
64251 chr8 125551377 125551377 1 + A C rs371001929 125551373 + 125551353 125551393 41 TGGCCCCGCTCAGTCACCCGCAGCAGGCGTGCAGTTTCCCG TGGCCCCGCTCAGTCACCCGCAGCCGGCGTGCAGTTTCCCG < 41bp 0.90661519127176 0.691104692968586 0.8637639 0.7723283 prediction 0.431020996606347 Functional Loss - NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551373 chr8:125551377 . . 0 25 hm5C_associated_SNPs_85157 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr17 70119082 70119082 1 + G A BLCA 70119079 + 70119059 70119099 41 TCGCCACACTCCTCCTCCGGCATGAGCGAGGTGCACTCCCC TCGCCACACTCCTCCTCCGGCATAAGCGAGGTGCACTCCCC < 41bp 0.790521673272295 0.575012039212831 0.27810657 0.21316704 prediction 0.431019268118929 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70119079 chr17:70119082 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_85159 0 0 1 RPS3 POSTAR2 ENCODE chr17:70119055-70119114
64251 chrX 101970974 101970974 1 + G C LUSC 101970970 + 101970950 101970990 41 GTCATTATTGGGTCCTGGTTCTGGGCAGAAAAAGAGGCCAG GTCATTATTGGGTCCTGGTTCTGGCCAGAAAAAGAGGCCAG < 41bp 0.870969162248715 0.655462535116519 0.6827211 0.38929647 prediction 0.431013254264391 Functional Loss - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101970970 chrX:101970974 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_85163 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:101970950-101970983
64251 chr17 48551159 48551159 1 + G A SKCM 48551156 + 48551136 48551176 41 TTCACACACACCCGAAGGTGCAGGAAGTGCAGGTGAGGCAC TTCACACACACCCGAAGGTGCAGAAAGTGCAGGTGAGGCAC < 41bp 0.798941607493944 0.583441611340157 0.62486255 0.2251234 prediction 0.430999992307574 Functional Loss - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48551156 chr17:48551159 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_85168 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48551151-48551166
64251 chr20 32210945 32210945 1 + G A BLCA 32210942 + 32210922 32210962 41 CCAACCTGCCCCTGCTGCAGCGGGAACTGCTGCACTGCGCT CCAACCTGCCCCTGCTGCAGCGGAAACTGCTGCACTGCGCT < 41bp 0.715490347592153 0.468703093455219 0.78879017 0.314485 prediction 0.430980695184305 Functional Loss - CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32210942 chr20:32210945 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_85173 0 0 5 BUD13 POSTAR2 ENCODE chr20:32210905-32210962
64251 chrX 64959692 64959692 1 + G A BLCA 64959689 + 64959669 64959709 41 CGACTGGGCCGAGACAAATACAAGACCCTGCGCCAGATCCG CGACTGGGCCGAGACAAATACAAAACCCTGCGCCAGATCCG < 41bp 0.781913337237623 0.566426946889747 0.81097335 0.36790633 prediction 0.430972780695751 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64959689 chrX:64959692 synonymous SNV . 0 24 hm5C_associated_SNPs_85176 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:64959680-64959700
64251 chr3 195955762 195955762 1 + G A rs939885 195955759 + 195955739 195955779 41 TGACCCTGGTGGGCCTGTTTCTCGTCCCCGACGGCATCTAT TGACCCTGGTGGGCCTGTTTCTCATCCCCGACGGCATCTAT < 41bp 0.715484616144525 0.46178799698487 0.045492887 0.030398965 prediction 0.430969232289051 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955759 chr3:195955762 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_85178 0 0 3 BUD13 POSTAR2 ENCODE chr3:195955686-195955796
64251 chr3 195955761 195955761 1 + C T OV 195955759 + 195955739 195955779 41 TGACCCTGGTGGGCCTGTTTCTCGTCCCCGACGGCATCTAT TGACCCTGGTGGGCCTGTTTCTTGTCCCCGACGGCATCTAT < 41bp 0.715484616144525 0.420619269950619 0.045492887 0.016797185 prediction 0.430969232289051 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955759 chr3:195955761 synonymous SNV . 0 23 hm5C_associated_SNPs_85179 0 0 3 BUD13 POSTAR2 ENCODE chr3:195955686-195955796
64251 chr10 89474612 89474612 1 + C T UCEC 89474609 + 89474589 89474629 41 TCCACCAGGTAGTGGAACTTCTGCAAGAGCAGGTAGGTGAA TCCACCAGGTAGTGGAACTTCTGTAAGAGCAGGTAGGTGAA < 41bp 0.776470160123076 0.560989080133499 0.8631984 0.4377011 prediction 0.430962159979154 Functional Loss - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89474609 chr10:89474612 stopgain 0.990 0 24 hm5C_associated_SNPs_85182 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:89474576-89474613
64251 chr7 150759082 150759082 1 + G T SARC 150759080 + 150759060 150759100 41 GGCTAAGATTCGGCCATGAGCAGCGCCCCTCGGCGCCCCGC GGCTAAGATTCGGCCATGAGCATCGCCCCTCGGCGCCCCGC < 41bp 0.715477921677966 0.345343060123387 0.86187816 0.1970425 prediction 0.430955843355932 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150759080 chr7:150759082 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_85183 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:150759072-150759111
64251 chr3 38407198 38407198 1 + A C rs2234611 38407197 + 38407177 38407217 41 GTGGGTGGTGCTCAGGCTCTCAGCTGCCTCACGGGGTCCCG GTGGGTGGTGCTCAGGCTCTCCGCTGCCTCACGGGGTCCCG < 41bp 0.837451856495683 0.621976715421568 0.74766946 0.119276345 prediction 0.430950282148229 Functional Loss - XYLB ENSG00000093217 CDS Human protein_coding chr3:38407197 chr3:38407198 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_85185 0 0 6 BUD13 POSTAR2 ENCODE chr3:38407114-38407219
64251 chr17 40723571 40723571 1 + C T UCEC 40723568 + 40723548 40723588 41 TCTGCTGCCCTCGCCAGACCCTGCGGGAGATTGTGATTGGC TCTGCTGCCCTCGCCAGACCCTGTGGGAGATTGTGATTGGC < 41bp 0.750281256377624 0.534806658565669 0.32021534 0.12882796 prediction 0.430949195623911 Functional Loss - MLX ENSG00000108788 CDS Human protein_coding chr17:40723568 chr17:40723571 nonsynonymous SNV 0.489 5 24 hm5C_associated_SNPs_85186 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:40723562-40723586
64251 chr1 65247071 65247071 1 + G T UCEC 65247069 + 65247049 65247089 41 ATGTATTGTATCAGCTTGCACAGGATGAAGGTAGTTACGTT ATGTATTGTATCAGCTTGCACATGATGAAGGTAGTTACGTT < 41bp 0.715473929415973 0.376257529945891 0.37504986 0.08402401 prediction 0.430947858831946 Functional Loss - RAVER2 ENSG00000162437 CDS Human protein_coding chr1:65247069 chr1:65247071 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_85187 0 0 1 SF3B4 POSTAR2 ENCODE chr1:65247017-65247072
64251 chr12 122481813 122481813 1 + C T SKCM 122481811 + 122481791 122481831 41 GACGATAACAGCAACCAGAGCTCCATCGCAGATGCCTCCCC GACGATAACAGCAACCAGAGCTTCATCGCAGATGCCTCCCC < 41bp 0.715463452060051 0.405295395569651 0.1332112 0.04240799 prediction 0.430926904120103 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122481811 chr12:122481813 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_85190 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:122481797-122481824
64251 chr6 1612133 1612133 1 + T C rs76166083 1612132 + 1612112 1612152 41 GCGGGCGGAGACCTGGGCCACTTGGCGAGCGCGGCGGCGGC GCGGGCGGAGACCTGGGCCACCTGGCGAGCGCGGCGGCGGC < 41bp 0.721937270685519 0.506476804210029 0.858274 0.83206236 prediction 0.430920932950979 Functional Loss - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1612132 chr6:1612133 synonymous SNV . 0 22 hm5C_associated_SNPs_85193 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:1612103-1612138
64251 chr19 45561090 45561090 1 + G A LUSC 45561087 + 45561067 45561107 41 TAGAGAAGGCGGCAGAAAAGCCAGAGGAGGAGGAGTCAGCG TAGAGAAGGCGGCAGAAAAGCCAAAGGAGGAGGAGTCAGCG < 41bp 0.795124561842032 0.579664600253814 0.89245707 0.7756255 prediction 0.430919923176435 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45561087 chr19:45561090 nonsynonymous SNV 0.891 0 24 hm5C_associated_SNPs_85194 0 0 9 BUD13 POSTAR2 ENCODE chr19:45561005-45561102
64251 chr5 138643732 138643732 1 + G T UCEC 138643729 + 138643709 138643749 41 ATGACCATGGAAGTCGTTCTCAAGAATCTGGTTATTATGAC ATGACCATGGAAGTCGTTCTCAATAATCTGGTTATTATGAC < 41bp 0.715458944061988 0.368886788232856 0.8547476 0.17515567 prediction 0.430917888123975 Functional Loss - MATR3 ENSG00000015479 CDS Human protein_coding chr5:138643729 chr5:138643732 stopgain 1.000 0 24 hm5C_associated_SNPs_85195 0 0 27 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:138643589-138643732
64251 chr12 58335595 58335595 1 + C T STAD 58335593 + 58335573 58335613 41 AGCGTCTGGCCCAGGGGAATCCCCAGCAAGGGTTCTTCTCC AGCGTCTGGCCCAGGGGAATCCTCAGCAAGGGTTCTTCTCC < 41bp 0.823953338509742 0.60849548446787 0.67054385 0.24210015 prediction 0.430915708083743 Functional Loss - ATP23 ENSG00000166896 CDS Human protein_coding chr12:58335593 chr12:58335595 synonymous SNV . 0 23 hm5C_associated_SNPs_85196 0 0 1 RBM15 POSTAR2 ENCODE chr12:58335570-58335619
64251 chr1 43828736 43828736 1 + G A rs45461499 43828733 + 43828713 43828753 41 CTGTTTTGAGTTGGACCCTGCGCGGCGGCGGGAGCGGGAGA CTGTTTTGAGTTGGACCCTGCGCAGCGGCGGGAGCGGGAGA < 41bp 0.807450064186598 0.591995772968291 0.6955786 0.24255192 prediction 0.430908582436615 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43828733 chr1:43828736 nonsynonymous SNV 0.189 0 24 hm5C_associated_SNPs_85198 0 1 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:43828689-43828744
64251 chr19 58048653 58048653 1 + C T SKCM 58048650 + 58048630 58048670 41 AGGAGTGTCACAGGCCAGGACTCCAAAGCTAGGTCCTTCCA AGGAGTGTCACAGGCCAGGACTCTAAAGCTAGGTCCTTCCA < 41bp 0.764722026058877 0.549268442159617 0.9601338 0.9331182 prediction 0.430907167798518 Functional Loss - ZNF549 ENSG00000121406 CDS Human protein_coding chr19:58048650 chr19:58048653 nonsynonymous SNV 0.026 0 24 hm5C_associated_SNPs_85199 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58048629-58048658
64251 chr3 183896907 183896907 1 + G T LUAD 183896904 + 183896884 183896924 41 TTGTGCTCATATATGAGCTGCTGGATGGTGAGGCTGGCGGG TTGTGCTCATATATGAGCTGCTGTATGGTGAGGCTGGCGGG < 41bp 0.715453261811677 0.383990046789569 0.464975 0.37453324 prediction 0.430906523623354 Functional Loss - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183896904 chr3:183896907 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85200 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:183896880-183896908
64251 chr18 67992804 67992804 1 + G A COAD 67992801 + 67992781 67992821 41 ACGGGAGTCATGTTGCAGAGCCCGAGAGCGGGTCACGATGA ACGGGAGTCATGTTGCAGAGCCCAAGAGCGGGTCACGATGA < 41bp 0.787805017684592 0.572351921340209 0.16662177 0.08202261 prediction 0.430906192688764 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992801 chr18:67992804 synonymous SNV . 0 24 hm5C_associated_SNPs_85201 0 0 1 RBM22 POSTAR2 ENCODE chr18:67992772-67992871
64251 chr7 150745994 150745994 1 + G A CESC 150745991 + 150745971 150746011 41 CCATGAAGCCCACCTCAGGCCCAGAGGAGGCCCGGCGGCCA CCATGAAGCCCACCTCAGGCCCAAAGGAGGCCCGGCGGCCA < 41bp 0.814039734800733 0.598593539878746 0.33731908 0.15855971 prediction 0.430892389843974 Functional Loss - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150745991 chr7:150745994 nonsynonymous SNV 0.159 0 24 hm5C_associated_SNPs_85206 0 0 3 PRPF8 POSTAR2 ENCODE chr7:150745899-150746052
64251 chr12 58016897 58016897 1 + G A LGG 58016894 + 58016874 58016914 41 CGCTGGCCACCACCAATCTACTGGTGGATGCTGGTGGGAAA CGCTGGCCACCACCAATCTACTGATGGATGCTGGTGGGAAA < 41bp 0.715436433055327 0.466615139576048 0.39432794 0.16877678 prediction 0.430872866110655 Functional Loss - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58016894 chr12:58016897 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_85215 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:58016879-58016903
64251 chr3 183508704 183508704 1 + C T UCEC 183508701 + 183508681 183508721 41 ACCTGCAAGGCTGCCACCCCCACCGTCGTCAGCGCCACGTC ACCTGCAAGGCTGCCACCCCCACTGTCGTCAGCGCCACGTC < 41bp 0.715430753189515 0.495887540890609 0.3509915 0.3351949 prediction 0.430861506379031 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183508701 chr3:183508704 synonymous SNV . 0 24 hm5C_associated_SNPs_85218 0 0 5 BUD13 POSTAR2 ENCODE chr3:183508644-183508752
64251 chrX 47083851 47083851 1 + G A UCEC 47083848 + 47083828 47083868 41 GACCAGGCTTCAGCCACGTCCTCGGATGAGGTGCAGTCTCC GACCAGGCTTCAGCCACGTCCTCAGATGAGGTGCAGTCTCC < 41bp 0.715423350505631 0.467620018088371 0.5052723 0.43340498 prediction 0.430846701011262 Functional Loss - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083848 chrX:47083851 synonymous SNV . 0 24 hm5C_associated_SNPs_85220 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917662 chrX:47083820-47083860
64251 chr17 37819124 37819124 1 + T C UCEC 37819123 + 37819103 37819143 41 TGTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAG TGTTTGAATTTGCCTTTCACCCGCGACAGCGCATCAGCGAG < 41bp 0.777479073532568 0.562060327343849 0.38731304 0.43691158 prediction 0.430837492377438 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819123 chr17:37819124 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_85225 0 0 3 LSM11 POSTAR2 ENCODE chr17:37819110-37819187
64251 chr11 47259709 47259709 1 + G A LIHC 47259706 + 47259686 47259726 41 CAGCTTAATGAATTCAATCCCATGGGGGACACGCTGGCCTC CAGCTTAATGAATTCAATCCCATAGGGGACACGCTGGCCTC < 41bp 0.715417836794557 0.474944854380158 0.8746425 0.279971 prediction 0.430835673589115 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47259706 chr11:47259709 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_85226 0 0 5 BUD13 POSTAR2 ENCODE chr11:47259698-47259741
64251 chr12 51636328 51636328 1 + G T UCEC 51636326 + 51636306 51636346 41 ACTGCTTTAGTCATATTAACCTGAAGTTGCAGTTTAGACAC ACTGCTTTAGTCATATTAACCTTAAGTTGCAGTTTAGACAC < 41bp 0.878855460524339 0.663441243623351 0.045903772 0.012278378 prediction 0.430828433801976 Functional Loss - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51636326 chr12:51636328 synonymous SNV . 0 23 hm5C_associated_SNPs_85229 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:51636286-51636332
64251 chr1 150448688 150448688 1 + G T rs13057 150448685 + 150448665 150448705 41 ACTTTTATACTTTCCAATACCAGGAATAAAATGTTTGTGAT ACTTTTATACTTTCCAATACCAGTAATAAAATGTTTGTGAT < 41bp 0.715408577724158 0.399382640230849 0.53212184 0.15153348 prediction 0.430817155448316 Functional Loss - RPRD2 ENSG00000163125 UTR3 Human protein_coding chr1:150448685 chr1:150448688 . . 0 24 hm5C_associated_SNPs_85231 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:150448656-150448690
64251 chr17 16342531 16342531 1 + G C LUAD 16342530 + 16342510 16342550 41 CTCCCCGGCTCCTGCGCCCGCGTGGCTTTCGCGGCGGGCGC CTCCCCGGCTCCTGCGCCCGCCTGGCTTTCGCGGCGGGCGC < 41bp 0.822004834990525 0.606608596463612 0.8367377 0.46133167 prediction 0.430792477053826 Functional Loss - LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342530 chr17:16342531 . . 0 22 hm5C_associated_SNPs_85238 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:16342498-16342533
64251 chr3 41279564 41279564 1 + G A UCEC 41279561 + 41279541 41279581 41 GAGAACCCCTTGGATATCGCCAGGATGGTATGTGTCTCATA GAGAACCCCTTGGATATCGCCAGAATGGTATGTGTCTCATA < 41bp 0.751029643021024 0.535635084962304 0.6152022 0.41939783 prediction 0.43078911611744 Functional Loss - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41279561 chr3:41279564 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_85240 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:41279532-41279564
64251 chr6 144508440 144508440 1 + G A COAD 144508437 + 144508417 144508457 41 AGAGCCGCATCCGCGACGTACACGAGCTCTTCTTGCAGATG AGAGCCGCATCCGCGACGTACACAAGCTCTTCTTGCAGATG < 41bp 0.805668128708124 0.59027400309356 0.21442464 0.0470331 prediction 0.430788251229129 Functional Loss - STX11 ENSG00000135604 CDS Human protein_coding chr6:144508437 chr6:144508440 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_85241 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:144508431-144508451
64251 chr3 135974715 135974715 1 + G T LUAD 135974712 + 135974692 135974732 41 TTGTAGGGAAAGCTAACAGCCAGGGAGAGGATCAGTCTCTT TTGTAGGGAAAGCTAACAGCCAGTGAGAGGATCAGTCTCTT < 41bp 0.715393952315138 0.31806009174707 0.81447166 0.51074207 prediction 0.430787904630276 Functional Loss - PCCB ENSG00000114054 CDS Human protein_coding chr3:135974712 chr3:135974715 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_85242 0 0 2 RPS3 POSTAR2 ENCODE chr3:135974713-135974806
64251 chr16 31501830 31501830 1 - G A COAD 31501832 - 31501812 31501852 41 GCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATGAG GCATAGAAGCCCCAGAGGAACATGGCCACTGCCATCATGAG < 41bp 0.785582154009713 0.570198475348924 0.085048884 0.07714763 prediction 0.430767357321576 Functional Loss - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501832 chr16:31501830 nonsynonymous SNV 0.194 2 23 hm5C_associated_SNPs_85251 0 0 2 UPF1 POSTAR2 ENCODE chr16:31501807-31501870
64251 chr7 141336807 141336807 1 + G T SARC 141336805 + 141336785 141336825 41 ATCAAAGCAGCCCACTTTTTCAGCACTCTTAAGGTAAATGT ATCAAAGCAGCCCACTTTTTCATCACTCTTAAGGTAAATGT < 41bp 0.715378095738566 0.377778105744299 0.40709713 0.08527768 prediction 0.430756191477133 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141336805 chr7:141336807 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_85256 0 0 2 PRPF8 POSTAR2 ENCODE chr7:141336799-141336843
64251 chr2 95537563 95537563 1 - C A LUSC 95537567 - 95537547 95537587 41 GTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTC GTGGAGTCTTGCTGCGTGCGCTGCTCCAGCGCCTGGGTCTC < 41bp 0.754569546961045 0.539204444216296 0.08142638 0.023947656 prediction 0.430730205489499 Functional Loss - TEKT4 ENSG00000163060 CDS Human protein_coding chr2:95537567 chr2:95537563 nonsynonymous SNV 0.437 4 25 hm5C_associated_SNPs_85263 0 0 1 NONO POSTAR2 ENCODE chr2:95537557-95537606
64251 chr19 1255633 1255633 1 + G T LUAD 1255631 + 1255611 1255651 41 TACCTCCTGCGAGAAGCTCACGGCTGCCCCCTCAGCCTCCC TACCTCCTGCGAGAAGCTCACGTCTGCCCCCTCAGCCTCCC < 41bp 0.715363046574316 0.353998476274006 0.73816526 0.07710147 prediction 0.430726093148632 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1255631 chr19:1255633 nonsynonymous SNV 0.019 0 23 hm5C_associated_SNPs_85264 0 0 1 YBX3 POSTAR2 ENCODE chr19:1255611-1255666
64251 chr12 7045008 7045008 1 + G A BRCA 7045005 + 7044985 7045025 41 CCATCCTTCTGTGACACCCACTGGATATCATGCTCCCATGG CCATCCTTCTGTGACACCCACTGAATATCATGCTCCCATGG < 41bp 0.830682301995472 0.615325018119375 0.122130156 0.019552976 prediction 0.430714567752193 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045005 chr12:7045008 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_85265 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:7045000-7045020
64251 chr11 129993558 129993558 1 + G A CESC 129993555 + 129993535 129993575 41 GCCCTGCCGGGCCGTGATGCCTCGTTGGTACTTCGACCTCT GCCCTGCCGGGCCGTGATGCCTCATTGGTACTTCGACCTCT < 41bp 0.785776381656036 0.570419774808102 0.144862 0.14412531 prediction 0.430713213695867 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129993555 chr11:129993558 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_85268 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:129993527-129993569
64251 chr6 26252083 26252083 1 + G C BLCA 26252079 + 26252059 26252099 41 GGGATCATGAATTCCTTTGTCAACGATATCTTCGAGCGCAT GGGATCATGAATTCCTTTGTCAACCATATCTTCGAGCGCAT < 41bp 0.715354169290639 0.43961842249032 0.23182556 0.17353562 prediction 0.430708338581277 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252079 chr6:26252083 nonsynonymous SNV 0.179 0 25 hm5C_associated_SNPs_85270 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26252081-26252119
64251 chr5 169023586 169023586 1 + C T COAD 169023583 + 169023563 169023603 41 AGTTACAAATTGCCACGTTGCTACAGATGAAAGGGTCTCAA AGTTACAAATTGCCACGTTGCTATAGATGAAAGGGTCTCAA < 41bp 0.754551370775561 0.539198880300642 0.817954 0.3661417 prediction 0.430704980949838 Functional Loss - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169023583 chr5:169023586 stopgain 0.936 1 24 hm5C_associated_SNPs_85272 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:169023574-169023607
64251 chr11 10521674 10521674 1 + C T STAD 10521671 + 10521651 10521691 41 GTGGATGATGAGTCCAAGCACAGCGACCACATGTTTTCCGA GTGGATGATGAGTCCAAGCACAGTGACCACATGTTTTCCGA < 41bp 0.715348916097595 0.492935726374306 0.18619686 0.1360121 prediction 0.43069783219519 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10521671 chr11:10521674 synonymous SNV . 0 24 hm5C_associated_SNPs_85275 0 0 1 RBM15 POSTAR2 ENCODE chr11:10521574-10521730
64251 chr17 73493926 73493926 1 + C T STAD 73493923 + 73493903 73493943 41 CTATGGCAACGGGGAAAAACCTCCAGTCCATTCCCAAGAAG CTATGGCAACGGGGAAAAACCTCTAGTCCATTCCCAAGAAG < 41bp 0.766375072146407 0.551026945499245 0.9556328 0.914596 prediction 0.430696253294324 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73493923 chr17:73493926 stopgain 0.988 0 24 hm5C_associated_SNPs_85276 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:73493889-73493928
64251 chr2 27662654 27662654 1 + C T HNSC 27662651 + 27662631 27662671 41 AGGAGTTCATTCAAAAGTGCCTGCAGTCTGAGCCTGCTCGC AGGAGTTCATTCAAAAGTGCCTGTAGTCTGAGCCTGCTCGC < 41bp 0.757240736836586 0.541892836787011 0.09825057 0.103500396 prediction 0.43069580009915 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27662651 chr2:27662654 stopgain 1.000 1 24 hm5C_associated_SNPs_85277 0 0 4 BUD13 POSTAR2 ENCODE chr2:27662636-27662677
64251 chr17 79857958 79857958 1 + C T UCEC 79857956 + 79857936 79857976 41 GAGTGAGGCCCGACCTGGCTCTCGCTGGAGGGGCATCCTGA GAGTGAGGCCCGACCTGGCTCTTGCTGGAGGGGCATCCTGA < 41bp 0.81509856059192 0.599753551219701 0.06340808 0.06570679 prediction 0.430690018744439 Functional Loss - ANAPC11 ENSG00000141552 CDS Human protein_coding chr17:79857956 chr17:79857958 synonymous SNV . 0 23 hm5C_associated_SNPs_85280 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79857862-79858053
64251 chr5 147040675 147040675 1 - C T SKCM 147040678 - 147040658 147040698 41 CAGAGCGCCTTAAGCTCTTACAGGAAATTGCGGACCTGAAA CAGAGCGCCTTAAGCTCTTACAGAAAATTGCGGACCTGAAA < 41bp 0.776505136792544 0.561161453327139 0.4556849 0.23059615 prediction 0.43068736693081 Functional Loss - JAKMIP2 ENSG00000176049 CDS Human protein_coding chr5:147040678 chr5:147040675 nonsynonymous SNV 0.482 4 24 hm5C_associated_SNPs_85282 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:147040674-147040675
64251 chr15 67073399 67073399 1 + C T CESC 67073397 + 67073377 67073417 41 GCAGCGTGGCGTACTGGGAGCACCGGACGCGCGTGGGCCGC GCAGCGTGGCGTACTGGGAGCATCGGACGCGCGTGGGCCGC < 41bp 0.77132148789488 0.555985302950163 0.44438133 0.46511975 prediction 0.430672369889434 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073397 chr15:67073399 synonymous SNV . 0 23 hm5C_associated_SNPs_85285 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:67073387-67073411
64251 chr17 37618596 37618596 1 + T C UCEC 37618595 + 37618575 37618615 41 CCGATGACATGGCCTTCAAACTAGACCGAAGGGAGAACGAC CCGATGACATGGCCTTCAAACCAGACCGAAGGGAGAACGAC < 41bp 0.795179664991127 0.57984890924796 0.13494939 0.19652975 prediction 0.430661511486334 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37618595 chr17:37618596 nonsynonymous SNV 0.924 1 22 hm5C_associated_SNPs_85289 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:37618518-37618603
64251 chr6 80749472 80749472 1 + G A HNSC 80749469 + 80749449 80749489 41 ATTTTGTACTATATGACTTACGGGAAAACACCATTTCAGCA ATTTTGTACTATATGACTTACGGAAAAACACCATTTCAGCA < 41bp 0.729501430717186 0.514174894849869 0.33973023 0.06266877 prediction 0.430653071734633 Functional Loss - TTK ENSG00000112742 CDS Human protein_coding chr6:80749469 chr6:80749472 synonymous SNV . 0 24 hm5C_associated_SNPs_85294 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:80749424-80749487
64251 chr20 43547570 43547570 1 + G T LUSC 43547567 + 43547547 43547587 41 CTTTGTGGGTCACTTCAAGTCTCGACGGGAGCGGGAGGCGG CTTTGTGGGTCACTTCAAGTCTCTACGGGAGCGGGAGGCGG < 41bp 0.928162733406519 0.712837530620649 0.9206028 0.92803156 prediction 0.43065040557174 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547567 chr20:43547570 nonsynonymous SNV 0.959 4 24 hm5C_associated_SNPs_85296 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:43547547-43547575
64251 chr11 47260392 47260392 1 + C T UCEC 47260390 + 47260370 47260410 41 GAGCCAGGAGGAAGCCAGGACACGGAAGTGAGAGACACTAA GAGCCAGGAGGAAGCCAGGACATGGAAGTGAGAGACACTAA < 41bp 0.819700937401492 0.604378141172506 0.39534828 0.26805678 prediction 0.430645592457972 Functional Loss - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47260390 chr11:47260392 nonsynonymous SNV 0.105 2 23 hm5C_associated_SNPs_85303 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47260367-47260394
64251 chrX 54957221 54957221 1 + C T UCEC 54957219 + 54957199 54957239 41 ACTGGCGAACCCAGCACCAGCACGGGCTTCAGTAGTGGACC ACTGGCGAACCCAGCACCAGCATGGGCTTCAGTAGTGGACC < 41bp 0.715320465853915 0.484550241352 0.27724424 0.31578952 prediction 0.43064093170783 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54957219 chrX:54957221 nonsynonymous SNV 0.012 3 23 hm5C_associated_SNPs_85306 0 0 1 BUD13 POSTAR2 ENCODE chrX:54957174-54957230
64251 chr1 153617712 153617712 1 + C T UCEC 153617709 + 153617689 153617729 41 CTGGATGCTGAGTTGGATGCCTACATGGCGCAGACAGATCC CTGGATGCTGAGTTGGATGCCTATATGGCGCAGACAGATCC < 41bp 0.743688020401574 0.528369703137383 0.93452334 0.86260486 prediction 0.430636634528382 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617709 chr1:153617712 synonymous SNV . 0 24 hm5C_associated_SNPs_85308 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:153617599-153617778
64251 chr11 59828685 59828685 1 + G A UCEC 59828682 + 59828662 59828702 41 AGCTGGGGTCAGCCTCTGCCCATGGTACCCCAGGCAGTGAG AGCTGGGGTCAGCCTCTGCCCATAGTACCCCAGGCAGTGAG < 41bp 0.802375639403576 0.587062186368468 0.37932992 0.1427575 prediction 0.430626906070216 Functional Loss - MS4A3 ENSG00000149516 CDS Human protein_coding chr11:59828682 chr11:59828685 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_85310 0 0 3 DDX3X POSTAR2 ENCODE chr11:59828654-59828694
64251 chr2 58358990 58358990 1 + C T OV 58358987 + 58358967 58359007 41 AGATCCTCGGCTACTGCATGCTGCGGTGGTTGTGTGGGAAA AGATCCTCGGCTACTGCATGCTGTGGTGGTTGTGTGGGAAA < 41bp 0.756784255242527 0.541474411670582 0.19841552 0.17786312 prediction 0.430619687143889 Functional Loss - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58358987 chr2:58358990 nonsynonymous SNV 0.941 3 24 hm5C_associated_SNPs_85311 0 0 3 GRWD1 POSTAR2 ENCODE chr2:58358942-58359059
64251 chr3 123348452 123348452 1 + G A rs367656778 123348449 + 123348429 123348469 41 GTTTCGTTATCGTTGTCTCCCATGAAGGGGGAAAGGCCACT GTTTCGTTATCGTTGTCTCCCATAAAGGGGGAAAGGCCACT < 41bp 0.715306775652941 0.476298313310636 0.09838435 0.080929965 prediction 0.430613551305882 Functional Loss - MYLK ENSG00000065534 CDS Human protein_coding chr3:123348449 chr3:123348452 synonymous SNV . 0 24 hm5C_associated_SNPs_85314 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:123348452-123348453
64251 chr17 53014509 53014509 1 + G A UCEC 53014506 + 53014486 53014526 41 CTGCCCCATCTCAAGATCTCCTCGACCTAAGTCCCAGTCCC CTGCCCCATCTCAAGATCTCCTCAACCTAAGTCCCAGTCCC < 41bp 0.764976243931925 0.549669763150509 0.4739076 0.12759295 prediction 0.430612961562831 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014506 chr17:53014509 nonsynonymous SNV 0.461 0 24 hm5C_associated_SNPs_85315 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:53014497-53014551
64251 chr19 54628008 54628008 1 + C T LGG 54628005 + 54627985 54628025 41 CCCCACACCGGCTACATCTACCACAGTGACATCGTGCAGTC CCCCACACCGGCTACATCTACCATAGTGACATCGTGCAGTC < 41bp 0.733609359567187 0.518303072598919 0.2795835 0.1928932 prediction 0.430612573936537 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54628005 chr19:54628008 synonymous SNV . 0 24 hm5C_associated_SNPs_85316 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:54627981-54628012
64251 chr22 38046233 38046233 1 + G T UCEC 38046229 + 38046209 38046249 41 GCGTCGTCGAGGCGCTGATCCAGAGCGCAGACACCCTCTTC GCGTCGTCGAGGCGCTGATCCAGATCGCAGACACCCTCTTC < 41bp 0.715301805925906 0.496828764898169 0.91589475 0.9086505 prediction 0.430603611851812 Functional Loss - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38046229 chr22:38046233 nonsynonymous SNV 0.529 1 25 hm5C_associated_SNPs_85320 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38046216-38046254
64251 chr9 131016963 131016963 1 + T C ESCA 131016962 + 131016942 131016982 41 TCAGGCAAGTCCATCCCGTCCTGAGAGCCCCAGGCCCCCCT TCAGGCAAGTCCATCCCGTCCCGAGAGCCCCAGGCCCCCCT < 41bp 0.7254414154081 0.510143222155783 0.058468193 0.23325053 prediction 0.430596386504633 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131016962 chr9:131016963 synonymous SNV . 0 22 hm5C_associated_SNPs_85327 0 0 2 HNRNPK POSTAR2 ENCODE chr9:131016902-131016986
64251 chr2 234356807 234356807 1 + G A rs10208953 234356804 + 234356784 234356824 41 ATCCTCACCTCGGACCAGCACTCGGTGGTCATCTCCTCGGC ATCCTCACCTCGGACCAGCACTCAGTGGTCATCTCCTCGGC < 41bp 0.82424832750527 0.608953379349185 0.26428747 0.10835883 prediction 0.430589896312169 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234356804 chr2:234356807 synonymous SNV . 0 24 hm5C_associated_SNPs_85329 0 0 6 DDX24 POSTAR2 ENCODE chr2:234356760-234356820
64251 chr5 43659377 43659377 1 + C T HNSC 43659375 + 43659355 43659395 41 TGTGTGCAGAGGGCTTCCTGCTCAACAACAATCTGCTGACC TGTGTGCAGAGGGCTTCCTGCTTAACAACAATCTGCTGACC < 41bp 0.715290941039402 0.408482777196338 0.2868059 0.19398001 prediction 0.430581882078804 Functional Loss - NNT ENSG00000112992 CDS Human protein_coding chr5:43659375 chr5:43659377 synonymous SNV . 0 23 hm5C_associated_SNPs_85332 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:43659372-43659399
64251 chr5 177547583 177547583 1 + A C UCEC 177547579 + 177547559 177547599 41 GCTGAGCTGCCTGCCCGAGCCACCACCCCCCTACGAGTTCT GCTGAGCTGCCTGCCCGAGCCACCCCCCCCCTACGAGTTCT < 41bp 0.715288786809861 0.279545017245731 0.12658504 0.08698174 prediction 0.430577573619723 Functional Loss - N4BP3 ENSG00000145911 CDS Human protein_coding chr5:177547579 chr5:177547583 synonymous SNV . 0 25 hm5C_associated_SNPs_85334 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:177547559-177547592
64251 chr11 117162473 117162473 1 - C A UCEC 117162476 - 117162456 117162496 41 ACCACCAACCTTCGTTTGCCCAAGAAAGTGTTTGAAGCTGC ACCACCAACCTTCGTTTGCCCAATAAAGTGTTTGAAGCTGC < 41bp 0.715288198487876 0.321940516639449 0.28715247 0.12567386 prediction 0.430576396975752 Functional Loss - BACE1 ENSG00000186318 CDS Human protein_coding chr11:117162476 chr11:117162473 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_85335 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117162442-117162474
64251 chr17 34958746 34958746 1 + C T STAD 34958744 + 34958724 34958764 41 TGCTGCGTTCCGCACACTTCCTCGGAGTGGATAAGGTCATC TGCTGCGTTCCGCACACTTCCTTGGAGTGGATAAGGTCATC < 41bp 0.715288043876843 0.462507351403338 0.21096626 0.09776139 prediction 0.430576087753687 Functional Loss - MRM1 ENSG00000129282 CDS Human other chr17:34958744 chr17:34958746 synonymous SNV . 0 23 hm5C_associated_SNPs_85336 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:34958728-34958753
64251 chr20 306791 306791 1 + G A LIHC 306788 + 306768 306808 41 ACGCCGAGATCTCCAAGCGCCTGGGCCGCCGCTGGCAGCTG ACGCCGAGATCTCCAAGCGCCTGAGCCGCCGCTGGCAGCTG < 41bp 0.793708067606684 0.578422485016308 0.7819795 0.31022388 prediction 0.430571165180753 Functional Loss - SOX12 ENSG00000177732 CDS Human protein_coding chr20:306788 chr20:306791 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85337 0 0 3 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr20:306775-306801
64251 chr16 70508837 70508837 1 + G A COAD 70508834 + 70508814 70508854 41 GCTGTGGCTGGCGGTGGGGCCTCGGCAGGATGAGATGACTG GCTGTGGCTGGCGGTGGGGCCTCAGCAGGATGAGATGACTG < 41bp 0.799742060024632 0.584457731299034 0.6116332 0.44420886 prediction 0.430568657451195 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70508834 chr16:70508837 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_85339 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr16:70508820-70508840
64251 chr12 85674179 85674179 1 + G A PRAD 85674176 + 85674156 85674196 41 CTTTTACAGCAAAGCGTCTGCAGGCAAATGCGTGCAGGCCT CTTTTACAGCAAAGCGTCTGCAGACAAATGCGTGCAGGCCT < 41bp 0.773505878775601 0.558223934093763 0.86655957 0.54506946 prediction 0.430563889363676 Functional Loss - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85674176 chr12:85674179 nonsynonymous SNV 0.750 2 24 hm5C_associated_SNPs_85340 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:85674179-85674180
64251 chr7 5267774 5267774 1 + C T rs145722805 5267771 + 5267751 5267791 41 CGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACATGTA CGGTTGTTGGTGGGTGCCGCCGATGGGTACCTGTACATGTA < 41bp 0.715280679285266 0.495512248270276 0.13208851 0.0942176 prediction 0.430561358570533 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5267771 chr7:5267774 synonymous SNV . 0 24 hm5C_associated_SNPs_85341 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5267742-5267784
64251 chr19 42729069 42729069 1 + C T LUSC 42729067 + 42729047 42729087 41 TTCTGCTACGGTAGCTGAGCCACCAGTGCCACCTCCTTTGC TTCTGCTACGGTAGCTGAGCCATCAGTGCCACCTCCTTTGC < 41bp 0.822502486289582 0.607223696967429 0.2535329 0.28475574 prediction 0.430557578644305 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729067 chr19:42729069 nonsynonymous SNV 0.312 0 23 hm5C_associated_SNPs_85343 0 0 3 GEMIN5 POSTAR2 ENCODE chr19:42729031-42729075
64251 chr10 111988079 111988079 1 + G T UCEC 111988077 + 111988057 111988097 41 AGCAACACCAGCACTGCCAACAGGTAGCAAGCTGGGAACGC AGCAACACCAGCACTGCCAACATGTAGCAAGCTGGGAACGC < 41bp 0.715276651891187 0.351708548704059 0.7373311 0.19111979 prediction 0.430553303782374 Functional Loss - MXI1 ENSG00000119950 CDS Human protein_coding chr10:111988077 chr10:111988079 nonsynonymous SNV 0.982 5 23 hm5C_associated_SNPs_85345 0 0 1 IGF2BP2 POSTAR2 ENCODE chr10:111987976-111988081
64251 chr1 21766663 21766663 1 + G C rs1566523 21766662 + 21766642 21766682 41 TTGGGTGGCGGTTGAGACAGCGGCGGTACTGGGATGGGTAG TTGGGTGGCGGTTGAGACAGCCGCGGTACTGGGATGGGTAG < 41bp 0.879994917790115 0.664719806697032 0.8802781 0.7514089 prediction 0.430550222186166 Functional Loss - NBPF3 ENSG00000142794 UTR5 Human protein_coding chr1:21766662 chr1:21766663 . . 0 22 hm5C_associated_SNPs_85346 0 0 2 NCBP2 POSTAR2 ENCODE chr1:21766655-21766814
64251 chr22 21998553 21998553 1 + C T rs141294668 21998551 + 21998531 21998571 41 ACTTTGGGTTTGTAGGGGTCCTCAAGTGCCTTTGTGATTAA ACTTTGGGTTTGTAGGGGTCCTTAAGTGCCTTTGTGATTAA < 41bp 0.715271678167029 0.49256272775343 0.40357083 0.076203465 prediction 0.430543356334057 Functional Loss - SDF2L1 ENSG00000128228 UTR3 Human protein_coding chr22:21998551 chr22:21998553 . . 0 23 hm5C_associated_SNPs_85347 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr22:21998423-21998587
64251 chr10 72619180 72619180 1 + G A UCEC 72619177 + 72619157 72619197 41 CCTGCATCCAGATATCTTCCCAGGACTACGCAAGATAGAGG CCTGCATCCAGATATCTTCCCAGAACTACGCAAGATAGAGG < 41bp 0.789723031516929 0.574453069051357 0.7879779 0.39415464 prediction 0.430539924931144 Functional Loss - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72619177 chr10:72619180 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_85348 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:72619177-72619200
64251 chr20 43036084 43036084 1 + G A SKCM 43036081 + 43036061 43036101 41 CAGTGCCGCTACTGCAGGCTCAAGAAATGCTTCCGGGCTGG CAGTGCCGCTACTGCAGGCTCAAAAAATGCTTCCGGGCTGG < 41bp 0.815152878267726 0.599883703306443 0.85223603 0.59109163 prediction 0.430538349922566 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43036081 chr20:43036084 synonymous SNV . 0 24 hm5C_associated_SNPs_85350 0 0 3 BUD13 POSTAR2 ENCODE chr20:43036006-43036152
64251 chr20 31607446 31607446 1 + C T SKCM 31607444 + 31607424 31607464 41 CAAGGTGCGGCTGGGTGCCACACCTGTGGCCATGCTCCACA CAAGGTGCGGCTGGGTGCCACATCTGTGGCCATGCTCCACA < 41bp 0.715260534410627 0.451630478324604 0.13280523 0.20073295 prediction 0.430521068821254 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31607444 chr20:31607446 nonsynonymous SNV 0.487 3 23 hm5C_associated_SNPs_85354 0 0 3 PPIG POSTAR2 ENCODE chr20:31607415-31607446
64251 chr7 105207749 105207749 1 + T C rs36058979 105207748 + 105207728 105207768 41 GAGGACAAATTGGCCTAATACTGGAAAATAATGTCTTTCAG GAGGACAAATTGGCCTAATACCGGAAAATAATGTCTTTCAG < 41bp 0.721997230851721 0.506745362325734 0.1433909 0.45191097 prediction 0.430503737051975 Functional Loss - RINT1 ENSG00000135249 CDS Human protein_coding chr7:105207748 chr7:105207749 synonymous SNV . 0 22 hm5C_associated_SNPs_85359 1 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:105207701-105207753
64251 chr2 27665739 27665739 1 + G A LUSC 27665736 + 27665716 27665756 41 CCGTGGGACTTGTGGCCCTCCTGGCGTCCAGGAACCTTCTT CCGTGGGACTTGTGGCCCTCCTGACGTCCAGGAACCTTCTT < 41bp 0.715247202525435 0.466757565297895 0.15534884 0.119588375 prediction 0.43049440505087 Functional Loss - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27665736 chr2:27665739 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_85364 0 0 1 PPIG POSTAR2 ENCODE chr2:27665727-27665768
64251 chr14 29237154 29237154 1 + G T LUAD 29237152 + 29237132 29237172 41 CTTACTACCGCGAGAACAAGCAGGGCTGGCAGAACTCCATC CTTACTACCGCGAGAACAAGCATGGCTGGCAGAACTCCATC < 41bp 0.916506358675411 0.7012621951027 0.94454527 0.929036 prediction 0.430488327145422 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237152 chr14:29237154 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_85368 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr14:29237136-29237169
64251 chr11 67378584 67378584 1 + C T rs150859374 67378581 + 67378561 67378601 41 GGCAGAGAACGCAACTCAGGCACCAAACTATTCAACATCTC GGCAGAGAACGCAACTCAGGCACTAAACTATTCAACATCTC < 41bp 0.738962121457166 0.523722722139255 0.36666924 0.18381631 prediction 0.430478798635824 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378581 chr11:67378584 synonymous SNV . 0 24 hm5C_associated_SNPs_85375 2 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:67378550-67378589
64251 chr19 35517265 35517265 1 + G A rs112390034 35517262 + 35517242 35517282 41 CCCCCCACTAACTTATTTTGCCCGGCTGAGGTTGTGGGGGG CCCCCCACTAACTTATTTTGCCCAGCTGAGGTTGTGGGGGG < 41bp 0.721508697855257 0.506269402934814 0.54909927 0.20186824 prediction 0.430478589840886 Functional Loss - GRAMD1A ENSG00000089351 UTR3 Human protein_coding chr19:35517262 chr19:35517265 . . 0 24 hm5C_associated_SNPs_85376 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35517237-35517324
64251 chr11 74914385 74914385 1 + C T UCEC 74914383 + 74914363 74914403 41 AGCCCCGTGATCCACGGCAGCGCCATCGACACCACCTGTGT AGCCCCGTGATCCACGGCAGCGTCATCGACACCACCTGTGT < 41bp 0.715236919704416 0.435568431914133 0.21290734 0.13302279 prediction 0.430473839408831 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74914383 chr11:74914385 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_85377 0 0 1 SND1 POSTAR2 ENCODE chr11:74914351-74914397
64251 chr19 36256066 36256066 1 + C T SKCM 36256064 + 36256044 36256084 41 GACTCCAGCAAGGGCCTTGGCCCCAGGGCACCCGGTAAGGG GACTCCAGCAAGGGCCTTGGCCTCAGGGCACCCGGTAAGGG < 41bp 0.71523083769165 0.435802490112329 0.32683814 0.12769431 prediction 0.4304616753833 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256064 chr19:36256066 nonsynonymous SNV 0.063 0 23 hm5C_associated_SNPs_85385 0 0 1 PPIG POSTAR2 ENCODE chr19:36256023-36256081
64251 chr19 36256067 36256067 1 + C T SKCM 36256064 + 36256044 36256084 41 GACTCCAGCAAGGGCCTTGGCCCCAGGGCACCCGGTAAGGG GACTCCAGCAAGGGCCTTGGCCCTAGGGCACCCGGTAAGGG < 41bp 0.71523083769165 0.493253837652222 0.32683814 0.18030769 prediction 0.4304616753833 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256064 chr19:36256067 synonymous SNV . 0 24 hm5C_associated_SNPs_85386 0 0 1 PPIG POSTAR2 ENCODE chr19:36256023-36256081
64251 chr7 98955969 98955969 1 + G A UCEC 98955966 + 98955946 98955986 41 CATGTTCTTGTGTTCAGGGTCTCGACTCTGAAGACAGAGTT CATGTTCTTGTGTTCAGGGTCTCAACTCTGAAGACAGAGTT < 41bp 0.777895987620723 0.562669788808328 0.07087004 0.024064839 prediction 0.430452397624789 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98955966 chr7:98955969 synonymous SNV . 0 24 hm5C_associated_SNPs_85388 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:98955960-98955980
64251 chrX 48386665 48386665 1 + C T STAD 48386663 + 48386643 48386683 41 TCTACTTCCTGACAGAGCACCGCGACGGATTCCAGCACGGA TCTACTTCCTGACAGAGCACCGTGACGGATTCCAGCACGGA < 41bp 0.832173320475503 0.616951302128053 0.7953149 0.6976577 prediction 0.4304440366949 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48386663 chrX:48386665 synonymous SNV . 0 23 hm5C_associated_SNPs_85394 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:48386644-48386689
64251 chr8 145749890 145749890 1 + G A PRAD 145749887 + 145749867 145749907 41 GTTGCCCGCCAGGTAGAGCACGCGCAGCTGGGCCAGGCCTA GTTGCCCGCCAGGTAGAGCACGCACAGCTGGGCCAGGCCTA < 41bp 0.734941612229374 0.519721573150323 0.222 0.08541992 prediction 0.430440078158103 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145749887 chr8:145749890 nonsynonymous SNV 0.940 4 24 hm5C_associated_SNPs_85396 0 0 1 LSM11 POSTAR2 ENCODE chr8:145749838-145749892
64251 chr17 46628422 46628422 1 - C A LUSC 46628424 - 46628404 46628444 41 CGGGGTCGGCGGCGTCCAAGCGGGCGCGGACGGCGTACACG CGGGGTCGGCGGCGTCCAAGCGTGCGCGGACGGCGTACACG < 41bp 0.912063915592936 0.696846532517781 0.90919244 0.8569217 prediction 0.430434766150309 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628424 chr17:46628422 synonymous SNV . 0 23 hm5C_associated_SNPs_85398 0 0 1 BUD13 POSTAR2 ENCODE chr17:46628411-46628477
64251 chr1 26885393 26885393 1 + C T COAD 26885391 + 26885371 26885411 41 GATGGAAGACGACGGCAAGCCTCGTGCCCCGCAGGCACCCC GATGGAAGACGACGGCAAGCCTTGTGCCCCGCAGGCACCCC < 41bp 0.833665032171389 0.618450170446859 0.13345301 0.10540348 prediction 0.43042972344906 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885391 chr1:26885393 nonsynonymous SNV 0.736 0 23 hm5C_associated_SNPs_85401 0 0 1 DDX24 POSTAR2 ENCODE chr1:26885342-26885427
64251 chr6 44114612 44114612 1 + G A OV 44114609 + 44114589 44114629 41 CCTACCCCAACTGCACAGTTCTCGAAGCCCGCCCGTGTTAC CCTACCCCAACTGCACAGTTCTCAAAGCCCGCCCGTGTTAC < 41bp 0.81241601459487 0.597201929249436 0.94347405 0.6235577 prediction 0.430428170690866 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44114609 chr6:44114612 nonsynonymous SNV 0.847 2 24 hm5C_associated_SNPs_85402 0 0 3 BUD13 POSTAR2 ENCODE chr6:44114583-44114616
64251 chr1 228880793 228880793 1 + G A rs116542113 228880790 + 228880770 228880810 41 TTAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAGAGGC TTAAAGCCACAGATGGCTTTCAGAGCAGTAGCAGCAGAGGC < 41bp 0.729318147065021 0.514108295320881 0.8968253 0.8770666 prediction 0.43041970348828 Functional Loss - RHOU ENSG00000116574 UTR3 Human protein_coding chr1:228880790 chr1:228880793 . . 0 24 hm5C_associated_SNPs_85404 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:228880767-228880801
64251 chr2 158114767 158114767 1 + G T LGG 158114765 + 158114745 158114785 41 AGGAGGGAGCGGATAGGATTCAGAGTTCAGCCAGACCAAGG AGGAGGGAGCGGATAGGATTCATAGTTCAGCCAGACCAAGG < 41bp 0.715207249867967 0.368311775724583 0.3627417 0.11858794 prediction 0.430414499735933 Functional Loss - GALNT5 ENSG00000136542 CDS Human protein_coding chr2:158114765 chr2:158114767 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_85406 0 0 2 RBM15 POSTAR2 ENCODE chr2:158114740-158114779
64251 chr3 101576283 101576283 1 + G A UCEC 101576280 + 101576260 101576300 41 AACAGCCAGTGCATTTGGTTCCCGATGGCCCTGTGGGAGAA AACAGCCAGTGCATTTGGTTCCCAATGGCCCTGTGGGAGAA < 41bp 0.790623068791338 0.575416648636618 0.24194449 0.1113646 prediction 0.43041284030944 Functional Loss - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101576280 chr3:101576283 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_85407 0 0 1 PPIG POSTAR2 ENCODE chr3:101576252-101576309
64251 chr2 113343638 113343638 1 + G A OV 113343635 + 113343615 113343655 41 GTGGCGGCCAAGCCGGAATCCTGGCAGCGGGACTGTCACTA GTGGCGGCCAAGCCGGAATCCTGACAGCGGGACTGTCACTA < 41bp 0.808615911086314 0.593415627413906 0.680976 0.2996102 prediction 0.430400567344816 Functional Loss - CHCHD5 ENSG00000125611 CDS Human protein_coding chr2:113343635 chr2:113343638 stopgain 0.990 1 24 hm5C_associated_SNPs_85410 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:113343630-113343659
64251 chr12 56477655 56477655 1 + C T UCS 56477653 + 56477633 56477673 41 GGGAACCTTGAGATTGTGCTCACGGGACACAATGCCGACCT GGGAACCTTGAGATTGTGCTCATGGGACACAATGCCGACCT < 41bp 0.832082898784268 0.61688722343843 0.7509126 0.7989086 prediction 0.430391350691676 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56477653 chr12:56477655 nonsynonymous SNV 0.961 1 23 hm5C_associated_SNPs_85413 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr12:56477650-56477669
64251 chr10 45499486 45499486 1 + C T UCEC 45499483 + 45499463 45499503 41 GAAGGAAGTCTGTGGCTGGTCTCCGTTAAGTATAGGGCTTT GAAGGAAGTCTGTGGCTGGTCTCTGTTAAGTATAGGGCTTT < 41bp 0.733918435983201 0.518723039654503 0.02642721 0.01570195 prediction 0.430390792657398 Functional Loss - ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45499483 chr10:45499486 nonsynonymous SNV 0.121 1 24 hm5C_associated_SNPs_85414 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr10:45499457-45499489
64251 chr6 7249076 7249076 1 + G A UCEC 7249073 + 7249053 7249093 41 GGTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCCAGAG GGTGGCCGTCTGAGCCTGGCCAGAGTGACCTTAACCCAGAG < 41bp 0.715194711611022 0.48375372239782 0.88867366 0.83739305 prediction 0.430389423222044 Functional Loss - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7249073 chr6:7249076 nonsynonymous SNV 0.015 0 24 hm5C_associated_SNPs_85415 0 0 4 DDX6 POSTAR2 ENCODE chr6:7249023-7249088
64251 chr19 9491836 9491836 1 + A C ESCA 9491832 + 9491812 9491852 41 TTGTCCCTTCAGAACTGTGTCAGAACTCACTCTGGAGAGAT TTGTCCCTTCAGAACTGTGTCAGACCTCACTCTGGAGAGAT < 41bp 0.715194261877495 0.318920084764552 0.26230276 0.3326466 prediction 0.430388523754991 Functional Loss - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9491832 chr19:9491836 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_85416 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:9491829-9491864
64251 chr3 49453180 49453180 1 + C T rs141422153 49453178 + 49453158 49453198 41 TGGCACTATCCAGATGGAGGCACCAAACACCCACATACCTG TGGCACTATCCAGATGGAGGCATCAAACACCCACATACCTG < 41bp 0.740419780813054 0.525227004579023 0.82948244 0.5270943 prediction 0.430385552468062 Functional Loss - TCTA ENSG00000145022 UTR3 Human protein_coding chr3:49453178 chr3:49453180 . . 0 23 hm5C_associated_SNPs_85418 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:49453170-49453220
64251 chr19 37853970 37853970 1 + A C OV 37853966 + 37853946 37853986 41 GAGTGTGAGCAAGGCTTTAGCCAGAAGTCACACCTCATCAG GAGTGTGAGCAAGGCTTTAGCCAGCAGTCACACCTCATCAG < 41bp 0.715192043930504 0.324126482020903 0.32657337 0.44502613 prediction 0.430384087861007 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853966 chr19:37853970 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_85419 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:37853932-37853977
64251 chr2 207459597 207459597 1 + G A SKCM 207459594 + 207459574 207459614 41 TAAATATGAGCAGCTGTCCACTCGATTCCAAGGGTAAAGTC TAAATATGAGCAGCTGTCCACTCAATTCCAAGGGTAAAGTC < 41bp 0.774383328827715 0.559192532431317 0.82926095 0.15669984 prediction 0.430381592792797 Functional Loss - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207459594 chr2:207459597 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_85423 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:207459577-207459609
64251 chr5 112203166 112203166 1 + G T UCEC 112203164 + 112203144 112203184 41 AAAAACAAGGACACAAAAAACAGGAGGTGCTGACCAAAGTC AAAAACAAGGACACAAAAAACATGAGGTGCTGACCAAAGTC < 41bp 0.87815938021993 0.662975019160656 0.7431823 0.21754292 prediction 0.430368722118548 Functional Loss - SRP19 ENSG00000153037 CDS Human protein_coding chr5:112203164 chr5:112203166 stopgain 1.000 1 23 hm5C_associated_SNPs_85424 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:112203145-112203186
64251 chr19 34838881 34838881 1 + G A rs146017138 34838878 + 34838858 34838898 41 CGGTCGCCGGCCAGGCAACCCCCGGGGCAACTGGCCGCCTA CGGTCGCCGGCCAGGCAACCCCCAGGGCAACTGGCCGCCTA < 41bp 0.79478384575093 0.579602001859422 0.8199142 0.3863792 prediction 0.430363687783014 Functional Loss - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34838878 chr19:34838881 nonsynonymous SNV 0.981 3 24 hm5C_associated_SNPs_85427 0 0 1 FMR1 POSTAR2 ENCODE chr19:34838781-34838904
64251 chr12 48359774 48359774 1 + C T LAML 48359771 + 48359751 48359791 41 CAAGACTCCCTTGTAATTCTCACCATCATGGTAAGCCTTAG CAAGACTCCCTTGTAATTCTCACTATCATGGTAAGCCTTAG < 41bp 0.715180950677844 0.492193920337345 0.048547685 0.070370406 prediction 0.430361901355688 Functional Loss - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48359771 chr12:48359774 synonymous SNV . 0 24 hm5C_associated_SNPs_85428 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:48359747-48359778
64251 chr17 60525998 60525998 1 + C T UCEC 60525995 + 60525975 60526015 41 AAGTTCAGAACCTGGTGGATCGCCGACTGCAGGTGAACCGA AAGTTCAGAACCTGGTGGATCGCTGACTGCAGGTGAACCGA < 41bp 0.738187684452858 0.5230108942252 0.46350467 0.1484007 prediction 0.430353580455316 Functional Loss - METTL2A ENSG00000087995 CDS Human protein_coding chr17:60525995 chr17:60525998 stopgain 0.686 1 24 hm5C_associated_SNPs_85430 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr17:60525971-60526019
64251 chr12 98995265 98995265 1 + A T HNSC 98995261 + 98995241 98995281 41 CTTCCTCGCCCTCCTCCACCCGAGATGCCAGAGTCTCTGAA CTTCCTCGCCCTCCTCCACCCGAGTTGCCAGAGTCTCTGAA < 41bp 0.887952735807238 0.672784105008926 0.73568153 0.17465836 prediction 0.430337261596624 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995261 chr12:98995265 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_85440 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr19 57060365 57060365 1 + A C LUSC 57060364 + 57060344 57060384 41 AAGATCAAGGAGTTACCTCTCAAGAAGGACTTCTGCGAAGG AAGATCAAGGAGTTACCTCTCCAGAAGGACTTCTGCGAAGG < 41bp 0.826633085930108 0.611466193405192 0.31086546 0.10702616 prediction 0.430333785049833 Functional Loss - ZFP28 ENSG00000196867 CDS Human protein_coding chr19:57060364 chr19:57060365 nonsynonymous SNV 0.284 1 22 hm5C_associated_SNPs_85442 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:57060360-57060380
64251 chr1 45793485 45793485 1 + G A DLBC 45793482 + 45793462 45793502 41 TACAGCCCTGCAGGCCCAGCCGGGCAGCATTGTCCCCACTC TACAGCCCTGCAGGCCCAGCCGGACAGCATTGTCCCCACTC < 41bp 0.816655181385348 0.601492404449963 0.83726585 0.23273247 prediction 0.430325553870771 Functional Loss - HPDL ENSG00000186603 CDS Human protein_coding chr1:45793482 chr1:45793485 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_85446 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:45793438-45793487
64251 chr19 39868421 39868421 1 + C T CESC 39868418 + 39868398 39868438 41 GAGCCTGCCCCGGCTCCCGTCGCCGACGGAGACATCCCCAG GAGCCTGCCCCGGCTCCCGTCGCTGACGGAGACATCCCCAG < 41bp 0.742868139030426 0.527713200914379 0.3086431 0.09424949 prediction 0.430309876232093 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868418 chr19:39868421 synonymous SNV . 0 24 hm5C_associated_SNPs_85451 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39868396-39868428
64251 chr18 32821032 32821032 1 + C T rs566067080 32821030 + 32821010 32821050 41 CCGGTCTTTGTGGCTTGCAGCTCGGGGTGGGTGGCTCATTT CCGGTCTTTGTGGCTTGCAGCTTGGGGTGGGTGGCTCATTT < 41bp 0.738212815364807 0.523082420017473 0.61216205 0.59213924 prediction 0.430260790694667 Functional Loss - ZNF397 ENSG00000186812 UTR5 Human protein_coding chr18:32821030 chr18:32821032 . . 0 23 hm5C_associated_SNPs_85463 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr18:32821026-32821049
64251 chr7 100275215 100275215 1 + G T SARC 100275213 + 100275193 100275233 41 TGTGGGGGGTTGGACAACATCTGCTCCATCTACAGCCTCAA TGTGGGGGGTTGGACAACATCTTCTCCATCTACAGCCTCAA < 41bp 0.715127445965958 0.375107812192564 0.053097755 0.018760055 prediction 0.430254891931916 Functional Loss - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275213 chr7:100275215 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_85467 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:100275200-100275237
64251 chr16 67644820 67644820 1 + C T COAD 67644817 + 67644797 67644837 41 AGAGAAAGACTTACCAGAGACGCCGGGAAGGGGGCCAGGAA AGAGAAAGACTTACCAGAGACGCTGGGAAGGGGGCCAGGAA < 41bp 0.759233792528998 0.544119027225407 0.3436951 0.36118016 prediction 0.430229530607181 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67644817 chr16:67644820 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85475 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:67644780-67644820
64251 chr12 53673580 53673580 1 + C T UCEC 53673578 + 53673558 53673598 41 TCTGAGAGACTGAAGGACCACTCGAAGGCAGCTGGCTCCTC TCTGAGAGACTGAAGGACCACTTGAAGGCAGCTGGCTCCTC < 41bp 0.868116231750763 0.653005362367931 0.810221 0.20348692 prediction 0.430221738765663 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53673578 chr12:53673580 nonsynonymous SNV 0.054 0 23 hm5C_associated_SNPs_85479 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:53673579-53673580
64251 chr8 42977681 42977681 1 + C T rs148949414 42977678 + 42977658 42977698 41 TTACCCCTGGTGAACCACAGCTCCGGGATGCTGGTGAAGTG TTACCCCTGGTGAACCACAGCTCTGGGATGCTGGTGAAGTG < 41bp 0.762146459615204 0.547036908492993 0.21081692 0.17719209 prediction 0.430219102244423 Functional Loss - POMK ENSG00000185900 CDS Human protein_coding chr8:42977678 chr8:42977681 synonymous SNV . 0 24 hm5C_associated_SNPs_85480 1 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977520-42977700
64251 chr3 126446002 126446002 1 + G T UCEC 126445999 + 126445979 126446019 41 CATCTTCTACCTTTGGCCTTCAAGATGGCAACTTGAGAGCC CATCTTCTACCTTTGGCCTTCAATATGGCAACTTGAGAGCC < 41bp 0.715107599185114 0.325959551479397 0.5860189 0.27768567 prediction 0.430215198370228 Functional Loss - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126445999 chr3:126446002 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_85482 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:126445972-126446002
64251 chr3 122283309 122283309 1 + C T BLCA 122283307 + 122283287 122283327 41 TGCGCCCGCCGTCCCCGCTCCTCGTGCGGGTGTACAAGTCC TGCGCCCGCCGTCCCCGCTCCTTGTGCGGGTGTACAAGTCC < 41bp 0.715105521118225 0.468791808491179 0.16438094 0.028850198 prediction 0.430211042236451 Functional Loss - DTX3L ENSG00000163840 CDS Human protein_coding chr3:122283307 chr3:122283309 synonymous SNV . 0 23 hm5C_associated_SNPs_85486 0 0 1 DDX3X POSTAR2 ENCODE chr3:122283221-122283444
64251 chr3 33906879 33906879 1 + C T UCEC 33906876 + 33906856 33906896 41 CGCCTGGCTCAGCTCCTCCTCCACAGGCGCAGGGACCACCC CGCCTGGCTCAGCTCCTCCTCCATAGGCGCAGGGACCACCC < 41bp 0.735979412539854 0.520874087541121 0.20520061 0.52031 prediction 0.430210649997466 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33906876 chr3:33906879 stopgain 0.989 1 24 hm5C_associated_SNPs_85487 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:33906840-33906880
64251 chr1 214505378 214505378 1 + G A BLCA 214505375 + 214505355 214505395 41 CAGCACCCCCTAGTGAGCTGCTGGAGATCTGCGAGCTCAGC CAGCACCCCCTAGTGAGCTGCTGAAGATCTGCGAGCTCAGC < 41bp 0.740994035657165 0.525889243722114 0.4431663 0.3302575 prediction 0.430209583870101 Functional Loss - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214505375 chr1:214505378 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_85488 0 0 1 PPIG POSTAR2 ENCODE chr1:214505365-214505414
64251 chr22 42032746 42032746 1 + G A LGG 42032743 + 42032723 42032763 41 AGTGCCAAAGCCAGCCGGGCCAGGACCAAAGCCGGTGATCT AGTGCCAAAGCCAGCCGGGCCAGAACCAAAGCCGGTGATCT < 41bp 0.807714813547215 0.592610391182255 0.41205546 0.3061633 prediction 0.430208844729921 Functional Loss - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032743 chr22:42032746 synonymous SNV . 0 24 hm5C_associated_SNPs_85489 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42032516-42032760
64251 chr1 236647388 236647388 1 + G A rs61736812 236647385 + 236647365 236647405 41 TGGGGAGCTTGGCAGAAGTTCACGGCCAGTGCAGGAATCCA TGGGGAGCTTGGCAGAAGTTCACAGCCAGTGCAGGAATCCA < 41bp 0.724040627218263 0.508942209450682 0.81722903 0.29500803 prediction 0.430196835535162 Functional Loss - EDARADD ENSG00000244457 ncRNA_exonic Human transcribed_processed_pseudogene chr1:236647385 chr1:236647388 . . 0 24 hm5C_associated_SNPs_85495 0 0 1 LIN28B POSTAR2 ENCODE chr1:236647358-236647430
64251 chr15 40293219 40293219 1 + G A LUSC 40293216 + 40293196 40293236 41 TCATCTCCTGGCTGTTGAACCACGATCCAGCAAAACGGCCC TCATCTCCTGGCTGTTGAACCACAATCCAGCAAAACGGCCC < 41bp 0.775944868817305 0.560849598213127 0.05323863 0.048828393 prediction 0.430190541208356 Functional Loss - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40293216 chr15:40293219 nonsynonymous SNV 0.866 3 24 hm5C_associated_SNPs_85499 0 0 1 YBX3 POSTAR2 ENCODE chr15:40293193-40293254
64251 chr2 183961165 183961165 1 + A C rs553293779 183961161 + 183961141 183961181 41 TTTTAGTAGAGATGGAGTCTCACCACATAGGCCAGGCAGTC TTTTAGTAGAGATGGAGTCTCACCCCATAGGCCAGGCAGTC < 41bp 0.715093883380743 0.338668903194877 0.15647992 0.19889954 prediction 0.430187766761486 Functional Loss - DUSP19 ENSG00000224643 ncRNA_intronic Human antisense chr2:183961161 chr2:183961165 . . 0 25 hm5C_associated_SNPs_85501 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr2:183961146-183961173
64251 chr17 27182228 27182228 1 + C T CESC 27182226 + 27182206 27182246 41 TTCTCTGGTCCCCGCTTGGCCTCGGCTTCTCGCAGTAATGG TTCTCTGGTCCCCGCTTGGCCTTGGCTTCTCGCAGTAATGG < 41bp 0.801658917397254 0.586569052401809 0.063740104 0.057013184 prediction 0.430179729990888 Functional Loss - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27182226 chr17:27182228 nonsynonymous SNV 0.007 0 23 hm5C_associated_SNPs_85504 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:27182188-27182235
64251 chr2 176973754 176973754 1 + C T BLCA 176973752 + 176973732 176973772 41 AGAGAAAAGACTTCAACTCTCTCGGATGCTCAACCTCACTG AGAGAAAAGACTTCAACTCTCTTGGATGCTCAACCTCACTG < 41bp 0.715089729399514 0.455009450363933 0.2843483 0.29480183 prediction 0.430179458799028 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973752 chr2:176973754 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_85506 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:176973683-176973759
64251 chr17 4686283 4686283 1 + T C COAD 4686282 + 4686262 4686302 41 TAGTACTGTGTGGGATCCAGCTGGTGAACGCGACCATTGGT TAGTACTGTGTGGGATCCAGCCGGTGAACGCGACCATTGGT < 41bp 0.715086588197645 0.479161651350331 0.5702935 0.899595 prediction 0.43017317639529 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4686282 chr17:4686283 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_85507 0 0 1 PPIG POSTAR2 ENCODE chr17:4686279-4686320
64251 chr3 108356375 108356375 1 + C T rs143396703 108356372 + 108356352 108356392 41 GTGAGAAAGGATGAATATATCACCATTGAAAATTTAGGAGC GTGAGAAAGGATGAATATATCACTATTGAAAATTTAGGAGC < 41bp 0.715084814893858 0.498945501787976 0.096572995 0.10631189 prediction 0.430169629787716 Functional Loss - DZIP3 ENSG00000198919 CDS Human protein_coding chr3:108356372 chr3:108356375 synonymous SNV . 0 24 hm5C_associated_SNPs_85510 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:108356349-108356381
64251 chr9 136324225 136324225 1 + G A STAD 136324222 + 136324202 136324242 41 TGAAGGCTCAGGCCAGCCTGCGGGGCCAGTACTGGACCCTC TGAAGGCTCAGGCCAGCCTGCGGAGCCAGTACTGGACCCTC < 41bp 0.763281834223707 0.548200198616959 0.9478655 0.934739 prediction 0.430163271213495 Functional Loss - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136324222 chr9:136324225 nonsynonymous SNV 0.659 3 24 hm5C_associated_SNPs_85513 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136324185-136324230
64251 chr11 70281612 70281612 1 + G A rs12858 70281609 + 70281589 70281629 41 TCTCTTGTGTTCGTGTTGCCCTCGTGCCCATCAAGTGCAGT TCTCTTGTGTTCGTGTTGCCCTCATGCCCATCAAGTGCAGT < 41bp 0.715076288299518 0.469902961566544 0.023278445 0.028806925 prediction 0.430152576599036 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70281609 chr11:70281612 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_85518 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:70281523-70281658
64251 chr16 3714438 3714438 1 - C G rs144787542 3714442 - 3714422 3714462 41 AGGAGGACATAGCAAAGCTGCTGCGCTACGAGTCCTCGGCG AGGAGGACATAGCAAAGCTGCTGCCCTACGAGTCCTCGGCG < 41bp 0.715071847575014 0.401867256562692 0.43422642 0.28784373 prediction 0.430143695150028 Functional Loss - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3714442 chr16:3714438 nonsynonymous SNV 0.967 4 25 hm5C_associated_SNPs_85522 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3714433-3714461
64251 chr1 147090753 147090753 1 + A C rs587610441 147090749 + 147090729 147090769 41 AACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCAC AACTCCACCCATTCCGGCACCAGCCCCCAAGCCTGCCGCAC < 41bp 0.715064025123819 0.300483011914199 0.2715134 0.13859633 prediction 0.430128050247638 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147090749 chr1:147090753 synonymous SNV . 0 25 hm5C_associated_SNPs_85526 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:147090711-147090756
64251 chr22 38201692 38201692 1 + C T COAD 38201690 + 38201670 38201710 41 AGAACCGCGCTGGCTCCTCGCGCCAGTCCATTCAGAAGTAT AGAACCGCGCTGGCTCCTCGCGTCAGTCCATTCAGAAGTAT < 41bp 0.84430387198837 0.629241564613074 0.13068125 0.26022175 prediction 0.430124614750591 Functional Loss - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201690 chr22:38201692 synonymous SNV . 0 23 hm5C_associated_SNPs_85527 0 0 2 GRWD1 POSTAR2 ENCODE chr22:38201632-38201701
64251 chr4 48384774 48384774 1 + G A LUAD 48384771 + 48384751 48384791 41 ACCATCACCACGCAATTCACCTCGACCGTCACCTAAGCAGT ACCATCACCACGCAATTCACCTCAACCGTCACCTAAGCAGT < 41bp 0.7150598730882 0.478265185348825 0.157752 0.021127313 prediction 0.430119746176399 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48384771 chr4:48384774 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_85528 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr4:48384745-48384774
64251 chr7 29923752 29923752 1 + G C ACC 29923748 + 29923728 29923768 41 ACTGACCAAAGGGAACCTCCCGGTGGTTGCACCCCCCGTCC ACTGACCAAAGGGAACCTCCCGGTCGTTGCACCCCCCGTCC < 41bp 0.886708462742888 0.671654054636866 0.9270253 0.9091377 prediction 0.430108816212044 Functional Loss - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29923748 chr7:29923752 synonymous SNV . 0 25 hm5C_associated_SNPs_85530 0 0 7 CSTF2T POSTAR2 ENCODE chr7:29923669-29923756
64251 chr16 310110 310110 1 + C T COAD 310107 + 310087 310127 41 GGCAGTGAGGCACCTTCTGCCTGCATCCTGGTGGGCAGACC GGCAGTGAGGCACCTTCTGCCTGTATCCTGGTGGGCAGACC < 41bp 0.75543815887504 0.540385930416545 0.42648456 0.13739955 prediction 0.430104456916991 Functional Loss - FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:310107 chr16:310110 synonymous SNV . 0 24 hm5C_associated_SNPs_85531 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:310106-310144
64251 chr6 170627651 170627651 1 + G A rs9460113 170627648 + 170627628 170627668 41 GAACCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATC GAACCCAGGCAAGAAGTTCCCACATGTACAGGCCCTGAATC < 41bp 0.802840401148162 0.587797451191984 0.7082396 0.89807594 prediction 0.430085899912357 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627648 chr6:170627651 synonymous SNV . 0 24 hm5C_associated_SNPs_85535 0 0 2 PUM2 POSTAR2 ENCODE chr6:170627638-170627680
64251 chr17 73482483 73482483 1 + C T STAD 73482480 + 73482460 73482500 41 GTCGGGAGGTAGAGCGGAGGCTGCGAGGGATCATTGACCAA GTCGGGAGGTAGAGCGGAGGCTGTGAGGGATCATTGACCAA < 41bp 0.723877466404699 0.508843391634572 0.30904675 0.3913579 prediction 0.430068149540255 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73482480 chr17:73482483 stopgain 0.986 0 24 hm5C_associated_SNPs_85538 0 0 6 DDX24 POSTAR2 ENCODE chr17:73482416-73482502
64251 chr19 42818986 42818986 1 + G T COAD 42818982 + 42818962 42819002 41 ACCCGCTACCTGAGCTGCTCCAGTGGCCGCAGCTTCCGCTC ACCCGCTACCTGAGCTGCTCCAGTTGCCGCAGCTTCCGCTC < 41bp 0.726339791121736 0.511305890916831 0.48178935 0.31012297 prediction 0.430067800409811 Functional Loss - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42818982 chr19:42818986 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_85540 0 0 1 PPIG POSTAR2 ENCODE chr19:42818942-42819023
64251 chr2 223423361 223423361 1 + C T UCEC 223423358 + 223423338 223423378 41 CCCTGTTATTCAGAACATCCCACCACTCACCACCTACATGT CCCTGTTATTCAGAACATCCCACTACTCACCACCTACATGT < 41bp 0.729349013301047 0.514319784854452 0.01417917 0.032901138 prediction 0.430058456893191 Functional Loss - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423358 chr2:223423361 nonsynonymous SNV 0.327 0 24 hm5C_associated_SNPs_85541 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:223423351-223423372
64251 chr16 2817264 2817264 1 + C T UCEC 2817261 + 2817241 2817281 41 GCAGCCATGAACCTAGCCAGCGCCAGGACACCTGCCATTCC GCAGCCATGAACCTAGCCAGCGCTAGGACACCTGCCATTCC < 41bp 0.715225682643918 0.500197028918673 0.19284153 0.09288925 prediction 0.43005730745049 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817261 chr16:2817264 synonymous SNV . 0 24 hm5C_associated_SNPs_85542 0 0 28 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:2816689-2817305
64251 chr17 1658155 1658155 1 + G A rs117803213 1658152 + 1658132 1658172 41 CCCCACGTCAGCTGGGACACCCCGACTTTTGTTTACCAGAG CCCCACGTCAGCTGGGACACCCCAACTTTTGTTTACCAGAG < 41bp 0.794106976695607 0.579080405941268 0.023045927 0.18052164 prediction 0.430053141508678 Functional Loss - SERPINF2 ENSG00000167711 UTR3 Human protein_coding chr17:1658152 chr17:1658155 . . 0 24 hm5C_associated_SNPs_85545 0 0 1 FAM120A POSTAR2 ENCODE chr17:1658116-1658159
64251 chr5 126862415 126862415 1 + G T UCEC 126862412 + 126862392 126862432 41 CCCAGAGGAGCAAGAAGACCCTAGAATTACTAGAGGTCAGG CCCAGAGGAGCAAGAAGACCCTATAATTACTAGAGGTCAGG < 41bp 0.715025876406268 0.347009776497796 0.2565102 0.25177807 prediction 0.430051752812536 Functional Loss - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126862412 chr5:126862415 nonsynonymous SNV 0.172 4 24 hm5C_associated_SNPs_85547 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:126862387-126862416
64251 chr2 202900279 202900279 1 + C T UCEC 202900277 + 202900257 202900297 41 ACTTCATGGTGGCCGTGGCGCACGTGGCCGGCTTCCTTCTA ACTTCATGGTGGCCGTGGCGCATGTGGCCGGCTTCCTTCTA < 41bp 0.802520039295036 0.587508088196172 0.2159622 0.18741846 prediction 0.430023902197728 Functional Loss - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202900277 chr2:202900279 synonymous SNV . 0 23 hm5C_associated_SNPs_85556 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:202900246-202900280
64251 chr5 121364020 121364020 1 + G C rs555944239 121364016 + 121363996 121364036 41 GAGCTTAAGAATTTAGATAACTCAGCCGGGCGTGGTGACTC GAGCTTAAGAATTTAGATAACTCACCCGGGCGTGGTGACTC < 41bp 0.805656408265841 0.590645559028432 0.054370373 0.012334913 prediction 0.430021698474818 Functional Loss - SRFBP1 ENSG00000151304 UTR3 Human protein_coding chr5:121364016 chr5:121364020 . . 0 25 hm5C_associated_SNPs_85557 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:121363989-121364043
64251 chr18 21735836 21735836 1 + C T BRCA 21735833 + 21735813 21735853 41 TGACAAAACCACCCAGTTTCCATCAGTTTATGCTGTGCCAG TGACAAAACCACCCAGTTTCCATTAGTTTATGCTGTGCCAG < 41bp 0.725009997364709 0.510003680514752 0.13644642 0.12817141 prediction 0.430012633699913 Functional Loss - CABYR ENSG00000154040 CDS Human protein_coding chr18:21735833 chr18:21735836 nonsynonymous SNV 0.844 3 24 hm5C_associated_SNPs_85559 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:21735814-21735838
64251 chr9 35750928 35750928 1 + G T SARC 35750926 + 35750906 35750946 41 ACAAACTGACCATTGGCTGCCAGCGTGTCAACTCCCCTATC ACAAACTGACCATTGGCTGCCATCGTGTCAACTCCCCTATC < 41bp 0.715001087069722 0.361593126627527 0.748755 0.11430016 prediction 0.430002174139444 Functional Loss - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35750926 chr9:35750928 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_85562 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:35750902-35750928
64251 chr3 130698121 130698121 1 + G T PRAD 130698119 + 130698099 130698139 41 CTTTGGCTTCTGGTCCTGAACTGGGACAGCTGACATTTCTT CTTTGGCTTCTGGTCCTGAACTTGGACAGCTGACATTTCTT < 41bp 0.714989333977892 0.392697378483027 0.46660528 0.2854612 prediction 0.429978667955783 Functional Loss - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130698119 chr3:130698121 synonymous SNV . 0 23 hm5C_associated_SNPs_85564 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:130698101-130698132
64251 chr17 30696361 30696361 1 + G T LUAD 30696359 + 30696339 30696379 41 AGTATCAACGTAATCTTCCTCGGCCAGGACAGGCCCCCATC AGTATCAACGTAATCTTCCTCGTCCAGGACAGGCCCCCATC < 41bp 0.714987330950647 0.373346811481509 0.39371383 0.15633273 prediction 0.429974661901293 Functional Loss - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30696359 chr17:30696361 synonymous SNV . 0 23 hm5C_associated_SNPs_85565 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30696322-30696375
64251 chr20 43034788 43034788 1 + G T LUAD 43034785 + 43034765 43034805 41 CATCTGCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT CATCTGCGGGGACCGGGCCACGGTCAAACACTACGGTGCCT < 41bp 0.714986955993599 0.312556509935648 0.89827 0.6284921 prediction 0.429973911987198 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43034785 chr20:43034788 nonsynonymous SNV 0.796 5 24 hm5C_associated_SNPs_85566 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:43034780-43034839
64251 chr20 43034787 43034787 1 + G T LUAD 43034785 + 43034765 43034805 41 CATCTGCGGGGACCGGGCCACGGGCAAACACTACGGTGCCT CATCTGCGGGGACCGGGCCACGTGCAAACACTACGGTGCCT < 41bp 0.714986955993599 0.348666336461947 0.89827 0.8752065 prediction 0.429973911987198 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43034785 chr20:43034787 nonsynonymous SNV 0.667 5 23 hm5C_associated_SNPs_85567 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:43034780-43034839
64251 chr6 36020527 36020527 1 + C T BLCA 36020524 + 36020504 36020544 41 CGTGTGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCAT CGTGTGGCAGTGAAGAAGCTCTCTAGACCATTTCAGTCCAT < 41bp 0.714983328447167 0.478635937398065 0.95288223 0.860857 prediction 0.429966656894335 Functional Loss - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:36020524 chr6:36020527 synonymous SNV . 0 24 hm5C_associated_SNPs_85574 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:36020492-36020532
64251 chr12 113826620 113826620 1 + C T rs367770796 113826618 + 113826598 113826638 41 AGAACTGACCCCCTCTCTCCCCCGAGGTGGGTGGGCACCGT AGAACTGACCCCCTCTCTCCCCTGAGGTGGGTGGGCACCGT < 41bp 0.786383167125029 0.571401684669831 0.3348812 0.424922 prediction 0.429962964910396 Functional Loss - PLBD2 ENSG00000151176 UTR3 Human protein_coding chr12:113826618 chr12:113826620 . . 0 23 hm5C_associated_SNPs_85576 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:113826599-113826659
64251 chrX 153668454 153668454 1 + T C OV 153668453 + 153668433 153668473 41 CCAGGATGTCATCGATTTCACTGGCCATGCCCTGGCGCTCT CCAGGATGTCATCGATTTCACCGGCCATGCCCTGGCGCTCT < 41bp 0.751224964548882 0.536244671838945 0.28802705 0.28532273 prediction 0.429960585419876 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668453 chrX:153668454 synonymous SNV . 0 22 hm5C_associated_SNPs_85578 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chrX:153668420-153668460
64251 chr2 73446039 73446039 1 + C T COAD 73446036 + 73446016 73446056 41 ATCCGGAAGGGGGAGACCATCTTCGTAGAACGGCCCCTGGT ATCCGGAAGGGGGAGACCATCTTTGTAGAACGGCCCCTGGT < 41bp 0.720776325350288 0.505797327451996 0.26773804 0.18364802 prediction 0.429957995796583 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73446036 chr2:73446039 synonymous SNV . 0 24 hm5C_associated_SNPs_85580 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:73446012-73446040
64251 chrX 48678570 48678570 1 + C T BLCA 48678568 + 48678548 48678588 41 TGATGCTGCACGGGGGGATCCGCTGGGGGGCTGCCAGGTGT TGATGCTGCACGGGGGGATCCGTTGGGGGGCTGCCAGGTGT < 41bp 0.714977552256726 0.446387414816574 0.8744372 0.8939537 prediction 0.429955104513452 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678568 chrX:48678570 synonymous SNV . 0 23 hm5C_associated_SNPs_85581 0 0 4 EIF3H POSTAR2 ENCODE chrX:48678530-48678610
64251 chr22 37965099 37965099 1 + C T rs143128226 37965097 + 37965077 37965117 41 GCCCCACTCCATGCCACCCCCACCAGCTGGAGGACCCAGCC GCCCCACTCCATGCCACCCCCATCAGCTGGAGGACCCAGCC < 41bp 0.784430260366305 0.56945443460367 0.571381 0.21528694 prediction 0.429951651525271 Functional Loss - CDC42EP1 ENSG00000128283 UTR3 Human protein_coding chr22:37965097 chr22:37965099 . . 0 23 hm5C_associated_SNPs_85582 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:37965007-37965108
64251 chr16 2258788 2258788 1 + G A SKCM 2258785 + 2258765 2258805 41 TCGGACAACCTGGCCCGGCTCTGGTGTGTGGAGACTGGAGA TCGGACAACCTGGCCCGGCTCTGATGTGTGGAGACTGGAGA < 41bp 0.767121095541762 0.552146835487929 0.43319914 0.24473816 prediction 0.429948520107666 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258785 chr16:2258788 stopgain 1.000 0 24 hm5C_associated_SNPs_85584 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:2258763-2258801
64251 chr5 72873772 72873772 1 + G T STAD 72873770 + 72873750 72873790 41 GCAAAGAAGGAATCACTTCCCAGAAGAAGAAGGCCTGCATA GCAAAGAAGGAATCACTTCCCATAAGAAGAAGGCCTGCATA < 41bp 0.89752128074895 0.682548420186743 0.8489616 0.11302844 prediction 0.429945721124415 Functional Loss - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72873770 chr5:72873772 nonsynonymous SNV 0.048 1 23 hm5C_associated_SNPs_85585 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:72873754-72873778
64251 chr7 77402502 77402502 1 + G A LUSC 77402499 + 77402479 77402519 41 AAAAAATCTTCAGTACCTACCTCGAACAAGTGAGCCCCGTG AAAAAATCTTCAGTACCTACCTCAAACAAGTGAGCCCCGTG < 41bp 0.735230199764821 0.520258596094633 0.663418 0.16053572 prediction 0.429943207340376 Functional Loss - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77402499 chr7:77402502 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85587 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:77402488-77402599
64251 chr17 48560746 48560746 1 + G A OV 48560743 + 48560723 48560763 41 CCAGGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGA CCAGGGGGCTGGAGGCCACACCCAGGAGGCTCGGATCCAGA < 41bp 0.807268032022243 0.592298999486918 0.54919493 0.0462566 prediction 0.429938065070649 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48560743 chr17:48560746 nonsynonymous SNV 0.758 3 24 hm5C_associated_SNPs_85589 0 0 7 BUD13 POSTAR2 ENCODE chr17:48560710-48560762
64251 chr6 1313422 1313422 1 + G A PRAD 1313419 + 1313399 1313439 41 CCCTTTTTCCGCGGCAGCTACACGGGCTGGCGCAACTCCGT CCCTTTTTCCGCGGCAGCTACACAGGCTGGCGCAACTCCGT < 41bp 0.739405315219548 0.524439478789616 0.93033624 0.77846825 prediction 0.429931672859865 Functional Loss - FOXQ1 ENSG00000164379 CDS Human protein_coding chr6:1313419 chr6:1313422 synonymous SNV . 0 24 hm5C_associated_SNPs_85591 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:1313415-1313438
64251 chr19 13059013 13059013 1 + C T BLCA 13059011 + 13058991 13059031 41 ACCAAAGCCGGCCAGGGTACCTCAGCACCCCCAGAGGCCTC ACCAAAGCCGGCCAGGGTACCTTAGCACCCCCAGAGGCCTC < 41bp 0.714965182166821 0.449218910580723 0.32379743 0.09233698 prediction 0.429930364333642 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059011 chr19:13059013 nonsynonymous SNV 0.965 0 23 hm5C_associated_SNPs_85592 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:13059012-13059013
64251 chr10 102732979 102732979 1 + G A HNSC 102732976 + 102732956 102732996 41 AGCAAGGCTGCTGGTGGGAGCCCGAGGTGCCCTGTTCTCTC AGCAAGGCTGCTGGTGGGAGCCCAAGGTGCCCTGTTCTCTC < 41bp 0.714961306667748 0.463894636892881 0.8537369 0.43874708 prediction 0.429922613335497 Functional Loss - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102732976 chr10:102732979 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_85595 0 0 7 GRWD1 POSTAR2 ENCODE chr10:102732954-102733006
64251 chr11 75277978 75277978 1 + C T LGG 75277976 + 75277956 75277996 41 GTCACCAAGGACGTGGAGCGCACGGACGGCGCCCTGCTAGT GTCACCAAGGACGTGGAGCGCATGGACGGCGCCCTGCTAGT < 41bp 0.825822480991062 0.610868085187226 0.84732795 0.8433001 prediction 0.429908791607673 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277976 chr11:75277978 nonsynonymous SNV 0.674 2 23 hm5C_associated_SNPs_85599 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:75277942-75277980
64251 chr9 4679816 4679816 1 + G T HNSC 4679814 + 4679794 4679834 41 ACCCTGGAGCCTCCCTCGGGCCGAGGGTGAGGCTGAGGAAG ACCCTGGAGCCTCCCTCGGGCCTAGGGTGAGGCTGAGGAAG < 41bp 0.714953528748594 0.357769060278582 0.3301923 0.15804693 prediction 0.429907057497189 Functional Loss - CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4679814 chr9:4679816 stopgain 0.896 0 23 hm5C_associated_SNPs_85601 0 0 1 BUD13 POSTAR2 ENCODE chr9:4679800-4679905
64251 chr2 120005392 120005392 1 + G A SKCM 120005389 + 120005369 120005409 41 GCCATGCCCCTGCGCCTCCTCCCGGCCTGGAAGGTGCCCAC GCCATGCCCCTGCGCCTCCTCCCAGCCTGGAAGGTGCCCAC < 41bp 0.805940338457357 0.590987040489958 0.78889096 0.33714235 prediction 0.429906595934797 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005389 chr2:120005392 synonymous SNV . 0 24 hm5C_associated_SNPs_85602 0 0 1 RPS3 POSTAR2 ENCODE chr2:120005288-120005396
64251 chr9 139818449 139818449 1 + G A GBM 139818446 + 139818426 139818466 41 CTGCTGCGGTGGCCCTTCAACCAGAAGGTGAGGCCGTCCCT CTGCTGCGGTGGCCCTTCAACCAAAAGGTGAGGCCGTCCCT < 41bp 0.714947504852352 0.462721472318293 0.52076304 0.14794266 prediction 0.429895009704705 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139818446 chr9:139818449 synonymous SNV . 0 24 hm5C_associated_SNPs_85608 0 0 1 FXR2 POSTAR2 ENCODE chr9:139818394-139818457
64251 chr13 115090566 115090566 1 + C T SKCM 115090564 + 115090544 115090584 41 GAAGGCAGTTCCCCCAGTGTCTCCAGAGCTTCGCAAACCCG GAAGGCAGTTCCCCCAGTGTCTTCAGAGCTTCGCAAACCCG < 41bp 0.870180117497609 0.655238874274211 0.96488404 0.3092308 prediction 0.429882486446796 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090564 chr13:115090566 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_85613 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115090551-115090576
64251 chr21 45113110 45113110 1 + C T COAD 45113108 + 45113088 45113128 41 AAGAGTATCTTGGTCAGTCCCACGGGCCCTTCTCGAGTGGC AAGAGTATCTTGGTCAGTCCCATGGGCCCTTCTCGAGTGGC < 41bp 0.714924923536566 0.441565894506514 0.10949549 0.17198688 prediction 0.429849847073132 Functional Loss - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45113108 chr21:45113110 nonsynonymous SNV 0.939 1 23 hm5C_associated_SNPs_85619 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:45113060-45113160
64251 chr17 40724276 40724276 1 + C T rs679 40724274 + 40724254 40724294 41 TGGGTGGTAAGGGAAGCCCTCCCGGTTCCCACAGGCTATGA TGGGTGGTAAGGGAAGCCCTCCTGGTTCCCACAGGCTATGA < 41bp 0.756877816968928 0.541955789608911 0.14149809 0.09398213 prediction 0.429844054720034 Functional Loss - MLX ENSG00000108788 UTR3 Human protein_coding chr17:40724274 chr17:40724276 . . 0 23 hm5C_associated_SNPs_85622 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:40724250-40724286
64251 chr9 35752822 35752822 1 + T C COAD 35752821 + 35752801 35752841 41 TGCTGCCTACTAGCCCCACCCTGGCCTCATATGCTGCCCCA TGCTGCCTACTAGCCCCACCCCGGCCTCATATGCTGCCCCA < 41bp 0.714916960017485 0.481196161278149 0.39973396 0.34406346 prediction 0.42983392003497 Functional Loss - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35752821 chr9:35752822 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_85626 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:35752805-35752835
64251 chr5 149340385 149340385 1 + G A rs540241474 149340382 + 149340362 149340402 41 TCCTCGCCGCGCCCGTAGGTCCCGGCAGCCGGGCCCCGCCT TCCTCGCCGCGCCCGTAGGTCCCAGCAGCCGGGCCCCGCCT < 41bp 0.78913660409537 0.574225354007675 0.33754474 0.098157436 prediction 0.429822500175391 Functional Loss - SLC26A2 ENSG00000155850 UTR5 Human protein_coding chr5:149340382 chr5:149340385 . . 0 24 hm5C_associated_SNPs_85630 0 0 2 DDX3X POSTAR2 ENCODE chr5:149340362-149340408
64251 chr16 2577777 2577777 1 + T C LUSC 2577776 + 2577756 2577796 41 CTTGCTCCCTCCTCCCAGGGCTGCACCTGGAGGGCCCCTTC CTTGCTCCCTCCTCCCAGGGCCGCACCTGGAGGGCCCCTTC < 41bp 0.805159238829874 0.590248049044622 0.2834053 0.2391778 prediction 0.429822379570504 Functional Loss - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577776 chr16:2577777 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_85631 0 0 7 AKAP8L POSTAR2 ENCODE chr16:2577725-2577821
64251 chr14 57747065 57747065 1 + T C rs373873973 57747064 + 57747044 57747084 41 TATTGATGCAATGGATGACTCTGCATTTAGTGGGCCTTACA TATTGATGCAATGGATGACTCCGCATTTAGTGGGCCTTACA < 41bp 0.828506179630794 0.613598888324789 0.1774776 0.13418207 prediction 0.429814582612011 Functional Loss - AP5M1 ENSG00000053770 CDS Human protein_coding chr14:57747064 chr14:57747065 synonymous SNV . 0 22 hm5C_associated_SNPs_85634 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr14:57747007-57747080
64251 chr9 112932182 112932182 1 + G A rs12340651 112932179 + 112932159 112932199 41 CCAGAGCTGTTTGCTGGCTTCAGGAGTGGAGTGAGAATTTC CCAGAGCTGTTTGCTGGCTTCAGAAGTGGAGTGAGAATTTC < 41bp 0.751275382835758 0.536370234031456 0.24697784 0.25778538 prediction 0.429810297608604 Functional Loss - AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 UTR3 Human other chr9:112932179 chr9:112932182 . . 0 24 hm5C_associated_SNPs_85635 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr9:112931922-112932237
64251 chr21 47552033 47552033 1 + G A COAD 47552030 + 47552010 47552050 41 GGACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGT GGACGACGACCCTCTCAACGCACACGTGGCGCTGCTGCAGT < 41bp 0.795108953492755 0.580218473898122 0.19879273 0.064098 prediction 0.429780959189266 Functional Loss - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552030 chr21:47552033 nonsynonymous SNV 0.041 5 24 hm5C_associated_SNPs_85646 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:47552014-47552049
64251 chr21 46596459 46596459 1 + G A rs61735851 46596456 + 46596436 46596476 41 TTTGAAGGCTCGGGGAGAAACAAGAAGCTTGCCAAGGCCCG TTTGAAGGCTCGGGGAGAAACAAAAAGCTTGCCAAGGCCCG < 41bp 0.782715487732547 0.567825482131319 0.6409035 0.2828617 prediction 0.429780011202456 Functional Loss - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596456 chr21:46596459 synonymous SNV . 0 24 hm5C_associated_SNPs_85647 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr21:46596459-46596481
64251 chr11 121028661 121028661 1 + C T UCEC 121028658 + 121028638 121028678 41 AGTCAGACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGC AGTCAGACGAGGAGTGTGCGCTGTGCAACGGGGTGCGCGGC < 41bp 0.714888842507129 0.49841482789637 0.22153956 0.1789329 prediction 0.429777685014258 Functional Loss - TECTA ENSG00000109927 CDS Human protein_coding chr11:121028658 chr11:121028661 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85649 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:121028643-121028669
64251 chr11 43469611 43469611 1 + C T CESC 43469608 + 43469588 43469628 41 GCCCGGACGAATGCCTCAAACTCCGCTGGGTAGAGCTGACT GCCCGGACGAATGCCTCAAACTCTGCTGGGTAGAGCTGACT < 41bp 0.714880456289964 0.477225737569829 0.20687604 0.14252606 prediction 0.429760912579928 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43469608 chr11:43469611 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_85652 0 0 4 SF3B4 POSTAR2 ENCODE chr11:43469499-43469611
64251 chr11 43469610 43469610 1 + C T UCEC 43469608 + 43469588 43469628 41 GCCCGGACGAATGCCTCAAACTCCGCTGGGTAGAGCTGACT GCCCGGACGAATGCCTCAAACTTCGCTGGGTAGAGCTGACT < 41bp 0.714880456289964 0.414345059740248 0.20687604 0.18739316 prediction 0.429760912579928 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43469608 chr11:43469610 synonymous SNV . 0 23 hm5C_associated_SNPs_85653 0 0 4 SF3B4 POSTAR2 ENCODE chr11:43469499-43469611
64251 chr2 191555083 191555083 1 + T C rs187518586 191555082 + 191555062 191555102 41 GTGATTTCTCTCACCGTTCTCTGGAAATGGCATCAGATTTA GTGATTTCTCTCACCGTTCTCCGGAAATGGCATCAGATTTA < 41bp 0.753163090991019 0.538288000958769 0.17760351 0.4137638 prediction 0.429750180064501 Functional Loss - NAB1 ENSG00000228509 ncRNA_exonic Human antisense chr2:191555082 chr2:191555083 . . 0 22 hm5C_associated_SNPs_85656 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr2:191555048-191555093
64251 chr19 50906837 50906837 1 + C T CESC 50906835 + 50906815 50906855 41 CGACCTTCCGTACCTCATCTCTCGGGCCCAGACCCTCAAGG CGACCTTCCGTACCTCATCTCTTGGGCCCAGACCCTCAAGG < 41bp 0.714873254918336 0.442988883786184 0.2548725 0.2163608 prediction 0.429746509836672 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906835 chr19:50906837 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_85657 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:50906788-50906841
64251 chr18 77107846 77107846 1 + A C LUAD 77107845 + 77107825 77107865 41 TAGGCAGGCTGCTCATGGTGCACGGGCGGAACAGCTACAAG TAGGCAGGCTGCTCATGGTGCCCGGGCGGAACAGCTACAAG < 41bp 0.714873173931796 0.471123395548285 0.05134198 0.048315078 prediction 0.429746347863593 Functional Loss - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77107845 chr18:77107846 nonsynonymous SNV 0.892 4 22 hm5C_associated_SNPs_85658 0 0 1 DDX24 POSTAR2 ENCODE chr18:77107767-77107846
64251 chr16 1547477 1547477 1 + T C rs2745108 1547476 + 1547456 1547496 41 GCCGGACCGGGCCATGGAGGCTGTGCTGACCGGGCTGGTGG GCCGGACCGGGCCATGGAGGCCGTGCTGACCGGGCTGGTGG < 41bp 0.714867246892543 0.480320659054944 0.24686816 0.25791377 prediction 0.429734493785087 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1547476 chr16:1547477 synonymous SNV . 0 22 hm5C_associated_SNPs_85668 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:1547454-1547478
64251 chr15 90997667 90997667 1 + G A UCEC 90997664 + 90997644 90997684 41 TGGGGGTCTGGGGCAGGTATCTCGATGAGTTGATGAAACTG TGGGGGTCTGGGGCAGGTATCTCAATGAGTTGATGAAACTG < 41bp 0.792002282094955 0.577140463876828 0.90230995 0.8718692 prediction 0.429723636436253 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:90997664 chr15:90997667 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_85673 0 0 7 CSTF2 POSTAR2 GSE40859,GSM1003589 chr15:90997652-90997673
64251 chr2 173333910 173333910 1 + G A UCEC 173333907 + 173333887 173333927 41 TTAATACGAAGCAGGAATCCCGAGACATCTTTGGGCGGTGT TTAATACGAAGCAGGAATCCCGAAACATCTTTGGGCGGTGT < 41bp 0.770835797334434 0.555974172816368 0.79049116 0.29342592 prediction 0.429723249036133 Functional Loss - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173333907 chr2:173333910 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_85674 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:173333898-173333926
64251 chr8 55060096 55060096 1 + C T SKCM 55060094 + 55060074 55060114 41 TTCCTGAAGCACGACTTGAACTCGCCAGGAAGTATGGTTAT TTCCTGAAGCACGACTTGAACTTGCCAGGAAGTATGGTTAT < 41bp 0.714855754547607 0.432714664765685 0.21883246 0.07522336 prediction 0.429711509095213 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060094 chr8:55060096 synonymous SNV . 0 23 hm5C_associated_SNPs_85678 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55060020-55060100
64251 chr8 55060097 55060097 1 + G A UCEC 55060094 + 55060074 55060114 41 TTCCTGAAGCACGACTTGAACTCGCCAGGAAGTATGGTTAT TTCCTGAAGCACGACTTGAACTCACCAGGAAGTATGGTTAT < 41bp 0.714855754547607 0.485568726904689 0.21883246 0.096301705 prediction 0.429711509095213 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060094 chr8:55060097 nonsynonymous SNV 0.509 3 24 hm5C_associated_SNPs_85679 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55060020-55060100
64251 chr20 47611012 47611012 1 + G A CESC 47611009 + 47610989 47611029 41 TCTTGAAATGCATCAGCCAGCTGGAGCTCGCTCAGCTGATA TCTTGAAATGCATCAGCCAGCTGAAGCTCGCTCAGCTGATA < 41bp 0.714854785826941 0.488084352553147 0.3924089 0.34604388 prediction 0.429709571653881 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47611009 chr20:47611012 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_85681 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:47610991-47611029
64251 chr17 42824480 42824480 1 + G A SKCM 42824477 + 42824457 42824497 41 CAAGGATGGAGAGCCAAGCCCACGATCAGCTGCCCACACCA CAAGGATGGAGAGCCAAGCCCACAATCAGCTGCCCACACCA < 41bp 0.829191705816139 0.614337146575208 0.24602368 0.036713004 prediction 0.429709118481861 Functional Loss - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42824477 chr17:42824480 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_85682 0 0 5 GRWD1 POSTAR2 ENCODE chr17:42824448-42824488
64251 chr17 34842620 34842620 1 + G C BLCA 34842619 + 34842599 34842639 41 AATACCGCTGTCCAGCCTGCCGCGTGCCCTAGTGAGCGGGG AATACCGCTGTCCAGCCTGCCCCGTGCCCTAGTGAGCGGGG < 41bp 0.714854197564981 0.406119714223628 0.17753467 0.0476048 prediction 0.429708395129963 Functional Loss - ZNHIT3 ENSG00000108278 CDS Human other chr17:34842619 chr17:34842620 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_85683 0 0 4 DDX3X POSTAR2 ENCODE chr17:34842532-34842630
64251 chr11 70265949 70265949 1 + C T CESC 70265947 + 70265927 70265967 41 ATCAAGGCAAAACGGAGAAGCACGAGTCCCAGAAAGGTGTC ATCAAGGCAAAACGGAGAAGCATGAGTCCCAGAAAGGTGTC < 41bp 0.853611375902402 0.638757819122527 0.22674692 0.18429106 prediction 0.429707113559748 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70265947 chr11:70265949 synonymous SNV . 0 23 hm5C_associated_SNPs_85684 0 0 2 PPIG POSTAR2 ENCODE chr11:70265876-70265952
64251 chr19 50386085 50386085 1 + G A HNSC 50386082 + 50386062 50386102 41 AGTTACAGAGGAGGAGTGGGCACGCCACGTGGGCCCTGAAG AGTTACAGAGGAGGAGTGGGCACACCACGTGGGCCCTGAAG < 41bp 0.714848393784745 0.460127355419853 0.41927642 0.176211 prediction 0.42969678756949 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386082 chr19:50386085 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_85688 0 0 2 BUD13 POSTAR2 ENCODE chr19:50386042-50386105
64251 chr9 35674101 35674101 1 + T C rs12553173 35674100 + 35674080 35674120 41 CGGATGCAGGAGGATTCCCCCTTGGGAGGAGGCTCTTCTGG CGGATGCAGGAGGATTCCCCCCTGGGAGGAGGCTCTTCTGG < 41bp 0.751666556694469 0.536827022657619 0.22323355 0.21365094 prediction 0.429679068073701 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35674100 chr9:35674101 synonymous SNV . 0 22 hm5C_associated_SNPs_85694 0 0 3 DDX3X POSTAR2 ENCODE chr9:35674080-35674124
64251 chr5 52235472 52235472 1 + G A SKCM 52235469 + 52235449 52235489 41 GGATCCTTTCAGTATCAACTCTGGAAAGAAAATGACTACAT GGATCCTTTCAGTATCAACTCTGAAAAGAAAATGACTACAT < 41bp 0.763865265002179 0.549027060207043 0.08227146 0.032813042 prediction 0.429676409590271 Functional Loss - ITGA1 ENSG00000213949 CDS Human protein_coding chr5:52235469 chr5:52235472 nonsynonymous SNV 0.974 0 24 hm5C_associated_SNPs_85696 0 0 3 GRWD1 POSTAR2 ENCODE chr5:52235420-52235525
64251 chr5 111496752 111496752 1 + G A rs143419014 111496749 + 111496729 111496769 41 CCGTGAACAAGGGCAGCGGCCTGGCCTCAGGCCTGCGTTCC CCGTGAACAAGGGCAGCGGCCTGACCTCAGGCCTGCGTTCC < 41bp 0.772995531172764 0.558157525808461 0.7383444 0.39218283 prediction 0.429676010728606 Functional Loss - EPB41L4A-AS1 ENSG00000224032 ncRNA_exonic Human lincRNA chr5:111496749 chr5:111496752 . . 0 24 hm5C_associated_SNPs_85697 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:111496653-111496910
64251 chr4 129783000 129783000 1 + G A LUAD 129782997 + 129782977 129783017 41 AGCACAGCTCACATAGGAAACCCGAGGAGAGTCTTGGCAAG AGCACAGCTCACATAGGAAACCCAAGGAGAGTCTTGGCAAG < 41bp 0.714836979322818 0.47272702362568 0.36634135 0.2299174 prediction 0.429673958645636 Functional Loss - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129782997 chr4:129783000 nonsynonymous SNV 0.062 1 24 hm5C_associated_SNPs_85698 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:129783000-129783032
64251 chr8 28574089 28574089 1 + G A rs35677003 28574086 + 28574066 28574106 41 GACGATGCCGGCCTCCCTCCCCCGAAGGCCACTCGGGGCTG GACGATGCCGGCCTCCCTCCCCCAAAGGCCACTCGGGGCTG < 41bp 0.714836969862305 0.455883998745512 0.27696413 0.30968884 prediction 0.42967393972461 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574086 chr8:28574089 synonymous SNV . 0 24 hm5C_associated_SNPs_85699 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:28574060-28574100
64251 chr20 47592558 47592558 1 + G A BLCA 47592555 + 47592535 47592575 41 ACTTTTGTTTCTCCGCAGGTCAGGAGAGGCTCACGGATCAG ACTTTTGTTTCTCCGCAGGTCAGAAGAGGCTCACGGATCAG < 41bp 0.790506334939372 0.575671861204295 0.8810434 0.6748496 prediction 0.429668947470153 Functional Loss - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47592555 chr20:47592558 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_85702 0 0 7 DDX24 POSTAR2 ENCODE chr20:47592546-47592668
64251 chr17 59482936 59482936 1 + C T CESC 59482934 + 59482914 59482954 41 TGGCCTTTTCCAGCCACTTGCACGGGCAGCAGTTCTTTGGG TGGCCTTTTCCAGCCACTTGCATGGGCAGCAGTTCTTTGGG < 41bp 0.807313457975552 0.592479669561884 0.9184588 0.91640687 prediction 0.429667576827336 Functional Loss - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59482934 chr17:59482936 synonymous SNV . 0 23 hm5C_associated_SNPs_85704 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:59482920-59482940
64251 chr12 57963919 57963919 1 + C T ESCA 57963916 + 57963896 57963936 41 AGAAATACGAGGAGGAGATCCGCCGTCTCTATAAGCAGCTT AGAAATACGAGGAGGAGATCCGCTGTCTCTATAAGCAGCTT < 41bp 0.729034007083454 0.514202046310558 0.81702507 0.8879386 prediction 0.429663921545793 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57963916 chr12:57963919 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_85706 0 0 1 ZNF622 POSTAR2 ENCODE chr12:57963825-57963935
64251 chr1 52211221 52211221 1 + G T COAD 52211218 + 52211198 52211238 41 CTTTCTCTAGGGTTTGGATTCAGGATTTGTTCCTAGTGTCC CTTTCTCTAGGGTTTGGATTCAGTATTTGTTCCTAGTGTCC < 41bp 0.714826923173398 0.349366765480784 0.42455298 0.10477567 prediction 0.429653846346795 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52211218 chr1:52211221 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85709 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:52211217-52211248
64251 chr19 15752225 15752225 1 + G A SKCM 15752222 + 15752202 15752242 41 TCACCACCCCATCTGCCCTGCAGGATGCCACAGCTGAGCCT TCACCACCCCATCTGCCCTGCAGAATGCCACAGCTGAGCCT < 41bp 0.77696010946369 0.56213800464023 0.32608205 0.2039282 prediction 0.42964420964692 Functional Loss - CYP4F3 ENSG00000186529 UTR5 Human protein_coding chr19:15752222 chr19:15752225 . . 0 24 hm5C_associated_SNPs_85713 0 0 3 GRWD1 POSTAR2 ENCODE chr19:15752169-15752328
64251 chr11 71238423 71238423 1 + C T LUAD 71238421 + 71238401 71238441 41 TCCGGCTGTGGGGGCTGTGGCTCTGGCTGTGGGGGATGTGG TCCGGCTGTGGGGGCTGTGGCTTTGGCTGTGGGGGATGTGG < 41bp 0.764379790867229 0.549559718841984 0.36426482 0.30084223 prediction 0.42964014405049 Functional Loss - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238421 chr11:71238423 nonsynonymous SNV 0.183 3 23 hm5C_associated_SNPs_85715 0 0 5 DDX6 POSTAR2 ENCODE chr11:71238365-71238458
64251 chr1 9661392 9661392 1 + C T SKCM 9661390 + 9661370 9661410 41 CGGCAGTTGCTGGGCCTACTCCCCGAGCACATGGCGGAGAA CGGCAGTTGCTGGGCCTACTCCTCGAGCACATGGCGGAGAA < 41bp 0.714817192045706 0.436483612726083 0.4176861 0.1455718 prediction 0.429634384091412 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9661390 chr1:9661392 nonsynonymous SNV 0.571 4 23 hm5C_associated_SNPs_85720 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:9661391-9661392
64251 chr7 142985465 142985465 1 + G C rs11981631 142985461 + 142985441 142985481 41 GGCGCAGTGTGCGTCCGCGTCTGAGGGGAGGGATGTGGGGG GGCGCAGTGTGCGTCCGCGTCTGACGGGAGGGATGTGGGGG < 41bp 0.83421030043728 0.619401820421005 0.45468232 0.35023206 prediction 0.429616960032549 Functional Loss - CASP2 ENSG00000106144 UTR5 Human protein_coding chr7:142985461 chr7:142985465 . . 0 25 hm5C_associated_SNPs_85730 0 0 1 GEMIN5 POSTAR2 ENCODE chr7:142985461-142985616
64251 chr10 8006111 8006111 1 + G A UCEC 8006108 + 8006088 8006128 41 AGATGTTGTGTTATTGGAAGCTCGAGAGCCACTCAGCTCAA AGATGTTGTGTTATTGGAAGCTCAAGAGCCACTCAGCTCAA < 41bp 0.788258577117394 0.57345107286932 0.10303345 0.2839523 prediction 0.429615008496149 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006108 chr10:8006111 nonsynonymous SNV 0.804 1 24 hm5C_associated_SNPs_85731 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:8006099-8006126
64251 chr4 106861719 106861719 1 + G A LAML 106861716 + 106861696 106861736 41 GTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTG GTATCAGTGCAGCAGCTTTGCTCAATGTTATAACATACGTG < 41bp 0.797714437481882 0.582914988695128 0.27010715 0.6715815 prediction 0.429598897573509 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106861716 chr4:106861719 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_85735 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr4:106861719-106861740
64251 chr17 6939846 6939846 1 + G T HNSC 6939843 + 6939823 6939863 41 TTGTGGCGGCGTTTGAGGAGCAGGCAGCGCGCGTCTCCTGG TTGTGGCGGCGTTTGAGGAGCAGTCAGCGCGCGTCTCCTGG < 41bp 0.714796767016157 0.313417854467576 0.91189164 0.83995867 prediction 0.429593534032314 Functional Loss - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6939843 chr17:6939846 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_85738 0 0 2 RBM15 POSTAR2 ENCODE chr17:6939811-6939865
64251 chr17 34964141 34964141 1 + G A STAD 34964138 + 34964118 34964158 41 CAGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAAGCAC CAGGGCTGGCTCGTGGCCGGCACAGTGGGCTGCCCAAGCAC < 41bp 0.821082196776491 0.606295238070307 0.88698035 0.84112144 prediction 0.429573917412367 Functional Loss - MRM1 ENSG00000129282 CDS Human other chr17:34964138 chr17:34964141 synonymous SNV . 0 24 hm5C_associated_SNPs_85741 0 0 1 BUD13 POSTAR2 ENCODE chr17:34964087-34964171
64251 chr11 118263589 118263589 1 + C T STAD 118263587 + 118263567 118263607 41 AGAGTCACTGTGGATAGATCCACCATTGCAAGACATTTGCT AGAGTCACTGTGGATAGATCCATCATTGCAAGACATTTGCT < 41bp 0.714786288171768 0.411095103332369 0.0504148 0.027514666 prediction 0.429572576343535 Functional Loss - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118263587 chr11:118263589 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_85743 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:118263562-118263590
64251 chr12 110034458 110034458 1 + G T rs188368642 110034454 + 110034434 110034474 41 CTGGGGGCTGCAGTTCGACTCTGTGCTGGCCAGCGAGCGCC CTGGGGGCTGCAGTTCGACTCTGTTCTGGCCAGCGAGCGCC < 41bp 0.720732410000196 0.505946992798297 0.18524393 0.08911836 prediction 0.429570834403799 Functional Loss - MVK ENSG00000110921 UTR3 Human protein_coding chr12:110034454 chr12:110034458 . . 0 25 hm5C_associated_SNPs_85744 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:110034458-110034459
64251 chr16 57769728 57769728 1 + G A rs541924454 57769725 + 57769705 57769745 41 GGATGGAGGCAAGTGGGGGTCGCGCCTGGAGCGGAGCCTCG GGATGGAGGCAAGTGGGGGTCGCACCTGGAGCGGAGCCTCG < 41bp 0.76577418726389 0.550989660964249 0.5991238 0.4413629 prediction 0.429569052599282 Functional Loss - KATNB1 ENSG00000140854 UTR5 Human protein_coding chr16:57769725 chr16:57769728 . . 0 24 hm5C_associated_SNPs_85746 0 0 3 DDX3X POSTAR2 ENCODE chr16:57769685-57769778
64251 chr6 43406366 43406366 1 + C T LUSC 43406363 + 43406343 43406383 41 CTCGCCTGGCTCTCTGCAGGCTGCGTGGGCATGTGGCAGTG CTCGCCTGGCTCTCTGCAGGCTGTGTGGGCATGTGGCAGTG < 41bp 0.714782796862426 0.497150959117328 0.36971098 0.37932143 prediction 0.429565593724851 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43406363 chr6:43406366 nonsynonymous SNV 0.439 1 24 hm5C_associated_SNPs_85748 0 0 6 BUD13 POSTAR2 ENCODE chr6:43406344-43406396
64251 chr8 123964384 123964384 1 + G A rs35760254 123964381 + 123964361 123964401 41 AGGAGATCACCCCCGAGAACCACGTGGAAGGGACCGCCCGC AGGAGATCACCCCCGAGAACCACATGGAAGGGACCGCCCGC < 41bp 0.783673047532696 0.568895163146508 0.6285798 0.36900502 prediction 0.429555768772376 Functional Loss - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964381 chr8:123964384 nonsynonymous SNV 0.497 0 24 hm5C_associated_SNPs_85751 0 0 1 RBM22 POSTAR2 ENCODE chr8:123964350-123964393
64251 chr12 56487333 56487333 1 + C T LGG 56487330 + 56487310 56487350 41 CATAATCGGCCGCGCAGAGACTGCGGTGAGGGAAAGGGTCT CATAATCGGCCGCGCAGAGACTGTGGTGAGGGAAAGGGTCT < 41bp 0.715402854485764 0.500638518128258 0.30599004 0.17951041 prediction 0.429528672715012 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56487330 chr12:56487333 synonymous SNV . 0 24 hm5C_associated_SNPs_85757 0 0 1 PPIG POSTAR2 ENCODE chr12:56487262-56487335
64251 chr16 30594461 30594461 1 - C A STAD 30594463 - 30594443 30594483 41 CAGGCGCGTTTCTCCCAGCGCAGGTACCTGCTCCAGCATCA CAGGCGCGTTTCTCCCAGCGCATGTACCTGCTCCAGCATCA < 41bp 0.714763821869153 0.352286526480112 0.1498586 0.13050988 prediction 0.429527643738307 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594463 chr16:30594461 nonsynonymous SNV 0.040 1 23 hm5C_associated_SNPs_85758 0 0 1 GEMIN5 POSTAR2 ENCODE chr16:30594413-30594487
64251 chr1 15976265 15976265 1 + G A OV 15976262 + 15976242 15976282 41 TGCCATGTTCCTTCTCTATACTTGAGGAACAGCCCATGGAC TGCCATGTTCCTTCTCTATACTTAAGGAACAGCCCATGGAC < 41bp 0.787799123232004 0.573046924337016 0.21943387 0.13447219 prediction 0.429504397789976 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15976262 chr1:15976265 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_85762 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:15976257-15976295
64251 chr5 70806122 70806122 1 + G A LUAD 70806119 + 70806099 70806139 41 GGAGACGGATTTGAAAGCAACTGGAAGAGACAGTTTCCCAA GGAGACGGATTTGAAAGCAACTGAAAGAGACAGTTTCCCAA < 41bp 0.714750976170285 0.481681683126174 0.89024246 0.89365613 prediction 0.42950195234057 Functional Loss - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70806119 chr5:70806122 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_85764 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:70806101-70806122
64251 chr3 153839245 153839245 1 + C T rs35525643 153839243 + 153839223 153839263 41 TCTCGCGGCTGCGCTTCGGTCCCGGACCCGGGCCACCCACG TCTCGCGGCTGCGCTTCGGTCCTGGACCCGGGCCACCCACG < 41bp 0.714749126488281 0.477800395181065 0.8061285 0.43623433 prediction 0.429498252976562 Functional Loss - ARHGEF26 ENSG00000114790 UTR5 Human protein_coding chr3:153839243 chr3:153839245 . . 0 23 hm5C_associated_SNPs_85766 0 0 1 DDX3X POSTAR2 ENCODE chr3:153839235-153839297
64251 chr3 133538578 133538578 1 + G T UCEC 133538575 + 133538555 133538595 41 ACGTGGGCTCTGCTGACATCCAGGACTTGGAGAAATGGCTG ACGTGGGCTCTGCTGACATCCAGTACTTGGAGAAATGGCTG < 41bp 0.927996765117255 0.71324825183621 0.7156941 0.31356087 prediction 0.429497026562091 Functional Loss - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133538575 chr3:133538578 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_85768 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:133538512-133538586
64251 chr13 113773038 113773038 1 + C T UCEC 113773035 + 113773015 113773055 41 TGATGACCCAGGACTGCCTGCAGCAGTCACGGAAGGTGGGA TGATGACCCAGGACTGCCTGCAGTAGTCACGGAAGGTGGGA < 41bp 0.722897000956051 0.508148807017904 0.2720917 0.14336735 prediction 0.429496387876294 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113773035 chr13:113773038 stopgain 0.122 0 24 hm5C_associated_SNPs_85769 0 0 1 SND1 POSTAR2 ENCODE chr13:113772993-113773040
64251 chr2 202141631 202141631 1 + C T HNSC 202141629 + 202141609 202141649 41 CAATCACAATTTTGCAAAAGCACGGGAGAAAGTGCCCAAAC CAATCACAATTTTGCAAAAGCATGGGAGAAAGTGCCCAAAC < 41bp 0.780150128997657 0.565407175903584 0.18316346 0.2639839 prediction 0.429485906188146 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202141629 chr2:202141631 nonsynonymous SNV 0.009 3 23 hm5C_associated_SNPs_85772 1 0 2 GRWD1 POSTAR2 ENCODE chr2:202141606-202141704
64251 chr9 135929847 135929847 1 + C T rs79165136 135929844 + 135929824 135929864 41 GCAAAGCGCAGCACCTACAACTACAGCCTCCCCATCACCGT GCAAAGCGCAGCACCTACAACTATAGCCTCCCCATCACCGT < 41bp 0.762227474280816 0.547485132039278 0.018927068 0.04121411 prediction 0.429484684483077 Functional Loss - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929844 chr9:135929847 synonymous SNV . 0 24 hm5C_associated_SNPs_85776 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:135929829-135929855
64251 chr20 48600422 48600422 1 + G C OV 48600418 + 48600398 48600438 41 GCTGGCAGCCATCCCACCTCCGGAGATCCTCAACCCCACCG GCTGGCAGCCATCCCACCTCCGGACATCCTCAACCCCACCG < 41bp 0.875091719141254 0.660359522583964 0.91932905 0.19948393 prediction 0.429464393114581 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600418 chr20:48600422 nonsynonymous SNV 0.985 1 25 hm5C_associated_SNPs_85781 0 0 3 BUD13 POSTAR2 ENCODE chr20:48600311-48600450
64251 chr17 40456393 40456393 1 + C T BRCA 40456390 + 40456370 40456410 41 GGTGAGATCCTGAACAACTGCTGCGTGATGGAGTACCACCA GGTGAGATCCTGAACAACTGCTGTGTGATGGAGTACCACCA < 41bp 0.71472959881807 0.485620813031214 0.7248752 0.45805755 prediction 0.42945919763614 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40456390 chr17:40456393 synonymous SNV . 0 24 hm5C_associated_SNPs_85784 0 0 6 BUD13 POSTAR2 ENCODE chr17:40456356-40456434
64251 chr16 68573678 68573678 1 + G A rs202082484 68573675 + 68573655 68573695 41 CCCCAGCTCCTGCCCCGGAGCCGGGCCCTGGCGAGGCAGGA CCCCAGCTCCTGCCCCGGAGCCGAGCCCTGGCGAGGCAGGA < 41bp 0.766029160803717 0.551301391045969 0.8490635 0.55215555 prediction 0.429455539515496 Functional Loss - ZFP90 ENSG00000184939 UTR5 Human protein_coding chr16:68573675 chr16:68573678 . . 0 24 hm5C_associated_SNPs_85787 0 0 6 BUD13 POSTAR2 ENCODE chr16:68573619-68573725
64251 chr5 135391410 135391410 1 + G T UCEC 135391407 + 135391387 135391427 41 AGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTACGGGAC AGCTGCATCGCGGCCCACGACAATAGGGGGAGGTACGGGAC < 41bp 0.93326564556712 0.718545976842999 0.37981355 0.22839367 prediction 0.429439337448242 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135391407 chr5:135391410 nonsynonymous SNV 0.360 4 24 hm5C_associated_SNPs_85793 0 0 5 NOL12 POSTAR2 ENCODE chr5:135391368-135391448
64251 chrX 109419343 109419343 1 + C T rs757239393 109419341 + 109419321 109419361 41 GCCAGCGTGTGGGAGCTCTGCGCGTGTGTGAGGGTGTTTGT GCCAGCGTGTGGGAGCTCTGCGTGTGTGTGAGGGTGTTTGT < 41bp 0.717528712358801 0.502812061283373 0.3063628 0.17273924 prediction 0.429433302150855 Functional Loss - TMEM164 ENSG00000157600 UTR3 Human protein_coding chrX:109419341 chrX:109419343 . . 0 23 hm5C_associated_SNPs_85794 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chrX:109419310-109419356
64251 chr1 100964659 100964659 1 + C T LUSC 100964656 + 100964636 100964676 41 ACCAGAAATTACCCTGAGCTCAACAATAATCAGTACAACAG ACCAGAAATTACCCTGAGCTCAATAATAATCAGTACAACAG < 41bp 0.733398111616847 0.518682980474899 0.16504481 0.1362957 prediction 0.429430262283896 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964656 chr1:100964659 synonymous SNV . 0 24 hm5C_associated_SNPs_85795 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:100964640-100964665
64251 chr16 20797501 20797501 1 + G A UCEC 20797498 + 20797478 20797518 41 AAGGTTTGCACATCCCCTTCCAGGAGAATGTTTAACAACCC AAGGTTTGCACATCCCCTTCCAGAAGAATGTTTAACAACCC < 41bp 0.714715120484496 0.48061126745596 0.4580487 0.22810245 prediction 0.429430240968993 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20797498 chr16:20797501 synonymous SNV . 0 24 hm5C_associated_SNPs_85796 0 0 1 PUM2 POSTAR2 ENCODE chr16:20797489-20797575
64251 chr16 24192159 24192159 1 + G T PAAD 24192156 + 24192136 24192176 41 CTCGATTCTGAGGGACACATCAAGATTGCCGATTTTGGCAT CTCGATTCTGAGGGACACATCAATATTGCCGATTTTGGCAT < 41bp 0.714711415744669 0.34162126247508 0.4662819 0.13159156 prediction 0.429422831489338 Functional Loss - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24192156 chr16:24192159 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85799 0 0 4 FMR1 POSTAR2 ENCODE chr16:24192125-24192163
64251 chr16 88781068 88781068 1 + G C LIHC 88781064 + 88781044 88781084 41 GCAGTCACCCATCCCCCTGACTGAGACCCGGACACCCCCGG GCAGTCACCCATCCCCCTGACTGACACCCGGACACCCCCGG < 41bp 0.714709222924451 0.414391485048708 0.32224804 0.17588425 prediction 0.429418445848902 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781064 chr16:88781068 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_85801 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88781042-88781068
64251 chr17 4789812 4789812 1 + G A ESCA 4789809 + 4789789 4789829 41 ACTTACCTGAGCCGCCCACCCACGGAGCAGCTACTGAAGTT ACTTACCTGAGCCGCCCACCCACAGAGCAGCTACTGAAGTT < 41bp 0.727960341823892 0.513258553810971 0.3823194 0.3363061 prediction 0.429403576025844 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4789809 chr17:4789812 synonymous SNV . 0 24 hm5C_associated_SNPs_85805 0 0 4 DDX24 POSTAR2 ENCODE chr17:4789779-4789812
64251 chrX 129498622 129498622 1 + G T SARC 129498620 + 129498600 129498640 41 AGGGTGTGGTTCCAACTGCTCAGCGTGCTGCCATCGTTGTA AGGGTGTGGTTCCAACTGCTCATCGTGCTGCCATCGTTGTA < 41bp 0.714697998217294 0.37015969816855 0.39004755 0.2248416 prediction 0.429395996434587 Functional Loss - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129498620 chrX:129498622 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_85812 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:129498620-129498658
64251 chr11 62502885 62502885 1 + C T rs117790598 62502882 + 62502862 62502902 41 CTTCAGATGGAGCCCGTGAACTACGAACGAGTGAGAGAATA CTTCAGATGGAGCCCGTGAACTATGAACGAGTGAGAGAATA < 41bp 0.756107671471443 0.541410181376916 0.14452973 0.083046526 prediction 0.429394980189054 Functional Loss - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62502882 chr11:62502885 synonymous SNV . 0 24 hm5C_associated_SNPs_85813 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:62502861-62502916
64251 chr21 47552034 47552034 1 + C T BLCA 47552032 + 47552012 47552052 41 ACGACGACCCTCTCAACGCACGCGTGGCGCTGCTGCAGTTT ACGACGACCCTCTCAACGCACGTGTGGCGCTGCTGCAGTTT < 41bp 0.771201892714971 0.556510073493655 0.34314537 0.3001443 prediction 0.429383638442632 Functional Loss - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552032 chr21:47552034 synonymous SNV . 0 23 hm5C_associated_SNPs_85816 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:47552014-47552049
64251 chr18 10550172 10550172 1 + G A rs188246792 10550169 + 10550149 10550189 41 AAGCCTGATGGTGTCACTGCCACGGCTGCTGATGAAGAGGA AAGCCTGATGGTGTCACTGCCACAGCTGCTGATGAAGAGGA < 41bp 0.768190926488436 0.553499314923042 0.6691149 0.4324607 prediction 0.429383223130787 Functional Loss - NAPG ENSG00000134265 CDS Human protein_coding chr18:10550169 chr18:10550172 synonymous SNV . 0 24 hm5C_associated_SNPs_85817 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr18:10550160-10550180
64251 chr6 41898488 41898488 1 + C T COAD 41898485 + 41898465 41898505 41 GCCGGAGGCCTGGACTGCAGCTGCCATGTACCAGGCCACCA GCCGGAGGCCTGGACTGCAGCTGTCATGTACCAGGCCACCA < 41bp 0.715959205378713 0.501284521431557 0.02852285 0.06598082 prediction 0.429349367894311 Functional Loss - BYSL ENSG00000112578 CDS Human protein_coding chr6:41898485 chr6:41898488 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_85823 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:41898463-41898489
64251 chr16 28507283 28507283 1 + G A BRCA 28507280 + 28507260 28507300 41 GAAGCCAGGACAATCTCAGGCGGGGAGGAGGCTGAGACAGC GAAGCCAGGACAATCTCAGGCGGAGAGGAGGCTGAGACAGC < 41bp 0.810704511703192 0.59603089819677 0.6799695 0.42943043 prediction 0.429347227012844 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507280 chr16:28507283 synonymous SNV . 0 24 hm5C_associated_SNPs_85824 0 0 1 DGCR8 POSTAR2 ENCODE chr16:28507270-28507312
64251 chr15 29346684 29346684 1 + G A BLCA 29346681 + 29346661 29346701 41 GGCTACCAGGACTACTACCCCGAGGAGGCCAACGGGAACAC GGCTACCAGGACTACTACCCCGAAGAGGCCAACGGGAACAC < 41bp 0.807813746999176 0.593145684131926 0.88665724 0.5062513 prediction 0.4293361257345 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346681 chr15:29346684 synonymous SNV . 0 24 hm5C_associated_SNPs_85826 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr22 46704667 46704667 1 + G T LUSC 46704664 + 46704644 46704684 41 CCCTGCCCAGCTCTGGTGCCCAGGCCCGCCTCACCCGGGCG CCCTGCCCAGCTCTGGTGCCCAGTCCCGCCTCACCCGGGCG < 41bp 0.714666181066441 0.300841585593567 0.4367165 0.16820148 prediction 0.429332362132882 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704664 chr22:46704667 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_85827 0 0 3 GRWD1 POSTAR2 ENCODE chr22:46704597-46704667
64251 chr1 203277053 203277053 1 + G A rs12085417 203277050 + 203277030 203277070 41 TTACTCAGGGGCATTCATGCCTGGACTTAAACAATACTATG TTACTCAGGGGCATTCATGCCTGAACTTAAACAATACTATG < 41bp 0.719327670246915 0.504662321703918 0.08395389 0.1187478 prediction 0.429330697085994 Functional Loss - BTG2 ENSG00000159388 UTR3 Human protein_coding chr1:203277050 chr1:203277053 . . 0 24 hm5C_associated_SNPs_85828 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:203277040-203277080
64251 chr17 7983798 7983798 1 + G T UCEC 7983795 + 7983775 7983815 41 AGTCTCTGGGTCCCATGTCTCAAGATCTTTGCATCTCTAGG AGTCTCTGGGTCCCATGTCTCAATATCTTTGCATCTCTAGG < 41bp 0.714664982777772 0.330280353827704 0.9274019 0.2315768 prediction 0.429329965555544 Functional Loss - ALOX12B ENSG00000214999 CDS Human antisense chr17:7983795 chr17:7983798 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_85829 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:7983764-7983810
64251 chr20 42249520 42249520 1 + G A UCEC 42249517 + 42249497 42249537 41 GATGTTGTTTTCCAGTGGCTCACGACAGGAGACATCCACCT GATGTTGTTTTCCAGTGGCTCACAACAGGAGACATCCACCT < 41bp 0.77086439422327 0.556199584251546 0.08289769 0.032034248 prediction 0.429329619943447 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42249517 chr20:42249520 synonymous SNV . 0 24 hm5C_associated_SNPs_85830 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42249500-42249524
64251 chr1 113217557 113217557 1 + G C rs201021656 113217556 + 113217536 113217576 41 TGCCCAGTAAGTTCAGCTGCCGGCAGCTCCGGGAGGCGGGC TGCCCAGTAAGTTCAGCTGCCCGCAGCTCCGGGAGGCGGGC < 41bp 0.714661647095116 0.400952299047835 0.8899636 0.24796307 prediction 0.429323294190231 Functional Loss - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113217556 chr1:113217557 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_85833 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:113217534-113217560
64251 chr3 44906624 44906624 1 + C T UCEC 44906622 + 44906602 44906642 41 TCTGCGGACTCACCCTAATCCACAGGAAGCTCCCACCCACC TCTGCGGACTCACCCTAATCCATAGGAAGCTCCCACCCACC < 41bp 0.809454271654818 0.594796184668549 0.13565934 0.1706638 prediction 0.429316173972537 Functional Loss - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44906622 chr3:44906624 synonymous SNV . 0 23 hm5C_associated_SNPs_85835 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:44906591-44906643
64251 chr11 65733393 65733393 1 + C T rs688862 65733390 + 65733370 65733410 41 GCCCGGGACCTGCAGGGCCTCACCGTGGAGCATGCCATTGA GCCCGGGACCTGCAGGGCCTCACTGTGGAGCATGCCATTGA < 41bp 0.714654800830901 0.490011690922944 0.21010095 0.077795535 prediction 0.429309601661802 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65733390 chr11:65733393 synonymous SNV . 0 24 hm5C_associated_SNPs_85837 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65733383-65733421
64251 chr19 4318403 4318403 1 + C T SKCM 4318401 + 4318381 4318421 41 AACCTGCGGGTGGATGATCTCTCCGTGGAGTGGGACGCTAT AACCTGCGGGTGGATGATCTCTTCGTGGAGTGGGACGCTAT < 41bp 0.869240922264192 0.654595373048417 0.36166543 0.1683366 prediction 0.42929109843155 Functional Loss - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4318401 chr19:4318403 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_85841 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:4318396-4318417
64251 chr14 74531573 74531573 1 - G A rs147004133 74531576 - 74531556 74531596 41 CCTTTGCCAATGTTCTCATTCACCGGCTCTCGATCCTCCTT CCTTTGCCAATGTTCTCATTCACTGGCTCTCGATCCTCCTT < 41bp 0.743152262886835 0.528507898181412 0.087697 0.06827456 prediction 0.429288729410845 Functional Loss - ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74531576 chr14:74531573 synonymous SNV . 0 24 hm5C_associated_SNPs_85843 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:74531558-74531590
64251 chr21 17197314 17197314 1 + G A LUAD 17197311 + 17197291 17197331 41 GCACAGAAACAGAGAAATAACAAGAATTAAGAGGGAAGAGA GCACAGAAACAGAGAAATAACAAAAATTAAGAGGGAAGAGA < 41bp 0.724814330748705 0.510172036978561 0.90162134 0.8433214 prediction 0.429284587540289 Functional Loss - USP25 ENSG00000155313 CDS Human protein_coding chr21:17197311 chr21:17197314 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_85845 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:17197271-17197366
64251 chr18 33709977 33709977 1 + G C rs8084554 33709973 + 33709953 33709993 41 GGGAGTCCTGAACTGGAGCTCTGGGCCCAGAGGACTTCTGG GGGAGTCCTGAACTGGAGCTCTGGCCCCAGAGGACTTCTGG < 41bp 0.867131796210861 0.65249159065858 0.9072586 0.45194516 prediction 0.429280411104561 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33709973 chr18:33709977 synonymous SNV . 0 25 hm5C_associated_SNPs_85848 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:33709940-33709980
64251 chr3 53891003 53891003 1 + A C rs137866081 53891002 + 53890982 53891022 41 GCACTATCATCGGGTTTTCTCAGGTGTTTGAGGTACTTTTT GCACTATCATCGGGTTTTCTCCGGTGTTTGAGGTACTTTTT < 41bp 0.850830549614367 0.636191899886556 0.96205294 0.95721626 prediction 0.429277299455622 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53891002 chr3:53891003 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_85850 0 0 3 GRWD1 POSTAR2 ENCODE chr3:53890992-53891013
64251 chr22 19119464 19119464 1 - C T CESC 19119467 - 19119447 19119487 41 TAGGGGATGCTCTGCAGCACCTCGGGGGCTGCATATGCTGC TAGGGGATGCTCTGCAGCACCTCAGGGGCTGCATATGCTGC < 41bp 0.792500641890814 0.577868445743252 0.32297444 0.2125254 prediction 0.429264392295125 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119467 chr22:19119464 synonymous SNV . 0 24 hm5C_associated_SNPs_85853 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:19119456-19119481
64251 chr17 7762084 7762084 1 + C T GBM 7762081 + 7762061 7762101 41 TTATGAGGTGGGGCGGCTGTCTGCCAAGACCCGGAGCATCC TTATGAGGTGGGGCGGCTGTCTGTCAAGACCCGGAGCATCC < 41bp 0.738828833771015 0.524197872653457 0.014657319 0.020248443 prediction 0.429261922235117 Functional Loss - CYB5D1 ENSG00000182224 CDS Human protein_coding chr17:7762081 chr17:7762084 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_85855 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7762080-7762114
64251 chr11 61197634 61197634 1 + G T LIHC 61197632 + 61197612 61197652 41 GGGGAAAATGGCGGTGTCTACAGTGTTCTCGACTTCGTCGC GGGGAAAATGGCGGTGTCTACATTGTTCTCGACTTCGTCGC < 41bp 0.91390318891908 0.699274196036095 0.32224447 0.059104204 prediction 0.42925798576597 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61197632 chr11:61197634 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_85856 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:61197620-61197635
64251 chr9 131107576 131107576 1 + T C COAD 131107575 + 131107555 131107595 41 TTCGAGGGCACAGATACCCACTGGACCTTCCGCCAGCTGGA TTCGAGGGCACAGATACCCACCGGACCTTCCGCCAGCTGGA < 41bp 0.806469275105624 0.591842018135999 0.6607001 0.38740847 prediction 0.429254513939249 Functional Loss - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131107575 chr9:131107576 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_85860 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131107548-131107579
64251 chr16 14340939 14340939 1 + G A LGG 14340936 + 14340916 14340956 41 TGCAACTTGAGGTTGAAAAACGAGGGCAGCAGCAGCGGCCC TGCAACTTGAGGTTGAAAAACGAAGGCAGCAGCAGCGGCCC < 41bp 0.812001377068112 0.597375713750583 0.90019774 0.85186744 prediction 0.429251326635058 Functional Loss - MKL2 ENSG00000186260 CDS Human protein_coding chr16:14340936 chr16:14340939 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_85862 0 0 1 RBM22 POSTAR2 ENCODE chr16:14340871-14340966
64251 chr19 38782601 38782601 1 + C T UCEC 38782598 + 38782578 38782618 41 GCCCTGCGCACCGTCTGGAGCTCCGGAGATGACAAGGAGCA GCCCTGCGCACCGTCTGGAGCTCTGGAGATGACAAGGAGCA < 41bp 0.719129398133514 0.50450608157803 0.38896632 0.3801689 prediction 0.429246633110968 Functional Loss - SPINT2 ENSG00000167642 CDS Human protein_coding chr19:38782598 chr19:38782601 synonymous SNV . 0 24 hm5C_associated_SNPs_85863 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:38782576-38782603
64251 chr16 1748941 1748941 1 + G A COAD 1748938 + 1748918 1748958 41 GCCCCGGCTGGGGCCGCGGCCTCGCTCTCACAACAAGGTCC GCCCCGGCTGGGGCCGCGGCCTCACTCTCACAACAAGGTCC < 41bp 0.714614699619611 0.472196420693413 0.12595722 0.19226328 prediction 0.429229399239221 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748938 chr16:1748941 nonsynonymous SNV 0.958 3 24 hm5C_associated_SNPs_85874 0 0 10 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:1748940-1748960
64251 chr12 94620960 94620960 1 + A T LUAD 94620956 + 94620936 94620976 41 AGTGGCTGTCGAGAAGACATCAGGAGGAGGAAGACCCAAGG AGTGGCTGTCGAGAAGACATCAGGTGGAGGAAGACCCAAGG < 41bp 0.878543145265385 0.663930879263413 0.89172584 0.7982559 prediction 0.429224532003944 Functional Loss - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94620956 chr12:94620960 synonymous SNV . 0 25 hm5C_associated_SNPs_85878 0 0 1 BUD13 POSTAR2 ENCODE chr12:94620903-94620978
64251 chr16 29820923 29820923 1 + C T COAD 29820921 + 29820901 29820941 41 GGACCACGGGCTCCAGGCCCCGCGGGCTGACCGCATCCTGT GGACCACGGGCTCCAGGCCCCGTGGGCTGACCGCATCCTGT < 41bp 0.817771318195339 0.603167075293238 0.86359656 0.8569953 prediction 0.429208485804202 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820921 chr16:29820923 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_85886 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29820865-29821031
64251 chr9 139745229 139745229 1 + C T UCEC 139745227 + 139745207 139745247 41 GCCTATGGTCCTGCCCAGCACGCCATTTCAACTGAGAAAAT GCCTATGGTCCTGCCCAGCACGTCATTTCAACTGAGAAAAT < 41bp 0.815653533143359 0.601053458158918 0.07903728 0.09666556 prediction 0.429200149968882 Functional Loss - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139745227 chr9:139745229 nonsynonymous SNV 0.531 0 23 hm5C_associated_SNPs_85890 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:139745200-139745240
64251 chr20 60831215 60831215 1 + G T LIHC 60831212 + 60831192 60831232 41 TTCAGTAGAAGAGCACATGTCAGGGGCAGTGGAGGCTGGCT TTCAGTAGAAGAGCACATGTCAGTGGCAGTGGAGGCTGGCT < 41bp 0.714593954292747 0.431683350805864 0.9119025 0.29523933 prediction 0.429187908585495 Functional Loss - OSBPL2 ENSG00000130703 UTR5 Human protein_coding chr20:60831212 chr20:60831215 . . 0 24 hm5C_associated_SNPs_85893 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr20:60831189-60831218
64251 chr9 116018469 116018469 1 + C T SKCM 116018467 + 116018447 116018487 41 ATGGGGATGAGCTATATGGACTCCAACAGTACCATGCAACC ATGGGGATGAGCTATATGGACTTCAACAGTACCATGCAACC < 41bp 0.714593594173501 0.41798695837147 0.9400834 0.014921874 prediction 0.429187188347002 Functional Loss - SLC31A1 ENSG00000136868 CDS Human protein_coding chr9:116018467 chr9:116018469 nonsynonymous SNV 0.015 0 23 hm5C_associated_SNPs_85895 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:116018444-116018482
64251 chr17 38990928 38990928 1 + G T UCEC 38990925 + 38990905 38990945 41 TGTTGGCCTGCTCCCTTCCTCAAGTATTCTTAAAGCCATGG TGTTGGCCTGCTCCCTTCCTCAATTATTCTTAAAGCCATGG < 41bp 0.714593483216051 0.32250777714621 0.42513424 0.2245391 prediction 0.429186966432102 Functional Loss - TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38990925 chr17:38990928 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_85896 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:38990898-38990931
64251 chr17 27065189 27065189 1 + G A LGG 27065186 + 27065166 27065206 41 GCCACAGCCCCAGTTCATCTCGCGTTTCCTGGAGGGCCAGT GCCACAGCCCCAGTTCATCTCGCATTTCCTGGAGGGCCAGT < 41bp 0.809674194088065 0.595082057267865 0.7599019 0.29066873 prediction 0.4291842736404 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27065186 chr17:27065189 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_85897 1 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:27065180-27065200
64251 chr16 2758054 2758054 1 + G A rs557468762 2758051 + 2758031 2758071 41 GAAATGCCCACAGGGCTTGCCGCGTGGAGACTGATCTGTTC GAAATGCCCACAGGGCTTGCCGCATGGAGACTGATCTGTTC < 41bp 0.784203375581994 0.569619996341963 0.23547474 0.27737322 prediction 0.429166758480063 Functional Loss - KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2758051 chr16:2758054 . . 0 24 hm5C_associated_SNPs_85899 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr16:2758032-2758057
64251 chr15 69689856 69689856 1 + G A UCEC 69689853 + 69689833 69689873 41 TCTGTAAGGTGATTCGTGTCCTCGCCTTTGCTTATCCGTAC TCTGTAAGGTGATTCGTGTCCTCACCTTTGCTTATCCGTAC < 41bp 0.714575488607776 0.471986411197356 0.039310724 0.043772817 prediction 0.429150977215553 Functional Loss - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69689853 chr15:69689856 nonsynonymous SNV 0.654 3 24 hm5C_associated_SNPs_85904 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:69689852-69689884
64251 chr22 20760691 20760691 1 + C T UCEC 20760689 + 20760669 20760709 41 GCGGGAAGGGCTTCAGCTGCCACGCGTACCTGCTCGTGCAC GCGGGAAGGGCTTCAGCTGCCATGCGTACCTGCTCGTGCAC < 41bp 0.7924241805293 0.57785764563116 0.8519978 0.81736445 prediction 0.429133069796279 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20760689 chr22:20760691 synonymous SNV . 0 23 hm5C_associated_SNPs_85907 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:20760680-20760700
64251 chrX 2644353 2644353 1 + G A rs146973165 2644350 + 2644330 2644370 41 GTGGGGGCTGTCGTGGTCGCCGTGGCTGGAGCCATCTCTAG GTGGGGGCTGTCGTGGTCGCCGTAGCTGGAGCCATCTCTAG < 41bp 0.806487786757303 0.591924392603366 0.8984914 0.90241575 prediction 0.429126788307875 Functional Loss - CD99 ENSG00000002586 CDS Human protein_coding chrX:2644350 chrX:2644353 synonymous SNV . 0 24 hm5C_associated_SNPs_85909 0 0 16 RTCB POSTAR2 GSE38201,GSM936508 chrX:2644345-2644370
64251 chr7 128411620 128411620 1 + C T rs1044226 128411618 + 128411598 128411638 41 ATGTCAGAATGGGAACTCTCCTCGAAGTTCTCCCAAACTCA ATGTCAGAATGGGAACTCTCCTTGAAGTTCTCCCAAACTCA < 41bp 0.714562497250926 0.478699026360687 0.7329203 0.06918073 prediction 0.429124994501852 Functional Loss - CALU ENSG00000128595 intronic Human protein_coding chr7:128411618 chr7:128411620 . . 0 23 hm5C_associated_SNPs_85910 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr7:128411536-128411620
64251 chr12 113722539 113722539 1 + C T SKCM 113722536 + 113722516 113722556 41 CTTACAGGTGGGAACTTCTTCTCCAAGCACGTGCCCTGGAG CTTACAGGTGGGAACTTCTTCTCTAAGCACGTGCCCTGGAG < 41bp 0.7876364250671 0.573085968799464 0.9614347 0.938877 prediction 0.42910091253527 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113722536 chr12:113722539 synonymous SNV . 0 24 hm5C_associated_SNPs_85920 0 0 5 BUD13 POSTAR2 ENCODE chr12:113722529-113722572
64251 chr17 62533849 62533849 1 + T C LUSC 62533848 + 62533828 62533868 41 GGAAGCTGAGCGCTTCAGATCTCGGCTTCAGCTGGCTTCCT GGAAGCTGAGCGCTTCAGATCCCGGCTTCAGCTGGCTTCCT < 41bp 0.714546251258727 0.467151700857563 0.36089545 0.8029215 prediction 0.429092502517453 Functional Loss - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62533848 chr17:62533849 synonymous SNV . 0 22 hm5C_associated_SNPs_85924 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:62533837-62533874
64251 chr1 224553593 224553593 1 + G T UCEC 224553591 + 224553571 224553611 41 TCCATTGCAGTGGGTAATTCCAGAATTGATTGGCCATACCA TCCATTGCAGTGGGTAATTCCATAATTGATTGGCCATACCA < 41bp 0.714541628678234 0.459589213257734 0.36120695 0.18197191 prediction 0.429083257356468 Functional Loss - CNIH4 ENSG00000143771 CDS Human protein_coding chr1:224553591 chr1:224553593 stopgain 0.998 1 23 hm5C_associated_SNPs_85925 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:224553580-224553600
64251 chr17 74554171 74554171 1 + G C rs11870902 74554167 + 74554147 74554187 41 CGGCGTCATAGGGCCGGCTTCTGCGGGGGAGAGCGCCTAAC CGGCGTCATAGGGCCGGCTTCTGCCGGGGAGAGCGCCTAAC < 41bp 0.864585285331 0.650043679782196 0.7361876 0.39875883 prediction 0.429083211097608 Functional Loss - SNHG16 ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554167 chr17:74554171 . . 0 25 hm5C_associated_SNPs_85926 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:74554157-74554181
64251 chr19 10394884 10394884 1 + G A ESCA 10394881 + 10394861 10394901 41 ACCTATGGCAACGACTCCTTCTCGGCCAAGGCCTCAGTCAG ACCTATGGCAACGACTCCTTCTCAGCCAAGGCCTCAGTCAG < 41bp 0.817045375797846 0.602505224220479 0.12363848 0.0062405765 prediction 0.429080303154733 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394881 chr19:10394884 synonymous SNV . 0 24 hm5C_associated_SNPs_85927 0 0 2 DHX30 POSTAR2 ENCODE chr19:10394840-10394898
64251 chr15 50519219 50519219 1 + C T OV 50519216 + 50519196 50519236 41 TTGCAAAATCACACAACTTACACCATTTAATGGCTATGCTG TTGCAAAATCACACAACTTACACTATTTAATGGCTATGCTG < 41bp 0.714539460939999 0.489068103838085 0.018161386 0.029892087 prediction 0.429078921879999 Functional Loss - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50519216 chr15:50519219 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_85929 0 0 7 FUS POSTAR2 SRX029328 chr15:50519198-50519223
64251 chr19 17448962 17448962 1 + G T PAAD 17448958 + 17448938 17448978 41 GGCCACGCCCTCCGAATTCTCACAGCACCCCGAGACCTGCC GGCCACGCCCTCCGAATTCTCACATCACCCCGAGACCTGCC < 41bp 0.725204285110766 0.510669362854603 0.25475356 0.052750707 prediction 0.429069844512326 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17448958 chr19:17448962 nonsynonymous SNV 0.149 2 25 hm5C_associated_SNPs_85930 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:17448940-17449015
64251 chr18 33780267 33780267 1 + G A GBM 33780264 + 33780244 33780284 41 GCAGGAGAAGACTTCTACATCCCGAGGCAGTCGGTAGCTCA GCAGGAGAAGACTTCTACATCCCAAGGCAGTCGGTAGCTCA < 41bp 0.80619072117734 0.591659495833705 0.3536825 0.07862115 prediction 0.429062450687269 Functional Loss - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33780264 chr18:33780267 synonymous SNV . 0 24 hm5C_associated_SNPs_85933 0 0 1 PRPF8 POSTAR2 ENCODE chr18:33780250-33780323
64251 chr4 6989051 6989051 1 + G C rs181185690 6989050 + 6989030 6989070 41 GGGCATGGAGCCTCCGGCCGCGCGCCTCTAAGGCCCCGGCG GGGCATGGAGCCTCCGGCCGCCCGCCTCTAAGGCCCCGGCG < 41bp 0.714528553816533 0.410130171639283 0.20691764 0.043482035 prediction 0.429057107633066 Functional Loss - TBC1D14 ENSG00000132405 UTR5 Human protein_coding chr4:6989050 chr4:6989051 . . 0 22 hm5C_associated_SNPs_85934 0 0 4 DDX3X POSTAR2 ENCODE chr4:6988997-6989065
64251 chr2 169681219 169681219 1 + G A SKCM 169681216 + 169681196 169681236 41 CTGAGCAAAGCATTACAGAACACGAGAAAAAGGTAAGTATT CTGAGCAAAGCATTACAGAACACAAGAAAAAGGTAAGTATT < 41bp 0.735694231594036 0.521167576533504 0.3946033 0.29828858 prediction 0.429053310121064 Functional Loss - NOSTRIN ENSG00000163072 CDS Human protein_coding chr2:169681216 chr2:169681219 synonymous SNV . 0 24 hm5C_associated_SNPs_85936 0 0 1 IGF2BP1 POSTAR2 ENCODE chr2:169681163-169681224
64251 chr16 2086358 2086358 1 + C T HNSC 2086356 + 2086336 2086376 41 GCCCCTGAGGGAGCTGCGCCCTCGGCTCTGCCACCTGCGAA GCCCCTGAGGGAGCTGCGCCCTTGGCTCTGCCACCTGCGAA < 41bp 0.837721612363323 0.623195844820541 0.47424507 0.38996243 prediction 0.429051535085564 Functional Loss - SLC9A3R2 ENSG00000065054 CDS Human protein_coding chr16:2086356 chr16:2086358 nonsynonymous SNV 0.972 4 23 hm5C_associated_SNPs_85937 0 0 3 BUD13 POSTAR2 ENCODE chr16:2086270-2086368
64251 chrX 24226423 24226423 1 + C T DLBC 24226421 + 24226401 24226441 41 CAGCGGCAGCCGCCGCCGTGCACGAGCAGCAAATGGATGAC CAGCGGCAGCCGCCGCCGTGCATGAGCAGCAAATGGATGAC < 41bp 0.861536141278273 0.647019649741838 0.23037088 0.19658133 prediction 0.429032983072871 Functional Loss - ZFX ENSG00000005889 CDS Human protein_coding chrX:24226421 chrX:24226423 synonymous SNV . 0 23 hm5C_associated_SNPs_85945 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:24226420-24226440
64251 chr22 24125826 24125826 1 + G A UCEC 24125823 + 24125803 24125843 41 ATCTTTGTGGCTGTGGGCACCAGGCATGGGACTGAGCCCAT ATCTTTGTGGCTGTGGGCACCAGACATGGGACTGAGCCCAT < 41bp 0.798896813436813 0.584380622158417 0.2582186 0.20138025 prediction 0.429032382556792 Functional Loss - MMP11 ENSG00000267954 CDS Human other chr22:24125823 chr22:24125826 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_85946 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:24125785-24125836
64251 chrX 153171073 153171073 1 + G A OV 153171070 + 153171050 153171090 41 CACCCGGGACCCGCTGCTAGCCCGGGCGGAGCTGGCGCTGC CACCCGGGACCCGCTGCTAGCCCAGGCGGAGCTGGCGCTGC < 41bp 0.808442121330377 0.593929900478701 0.9043505 0.6765964 prediction 0.429024441703353 Functional Loss - AVPR2 ENSG00000126895 CDS Human protein_coding chrX:153171070 chrX:153171073 nonsynonymous SNV 0.131 0 24 hm5C_associated_SNPs_85948 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chrX:153171063-153171081
64251 chrX 64958970 64958970 1 + C T UCEC 64958967 + 64958947 64958987 41 GGGCAGAGGCTAGTGCTGACCTACGGGCTGATGCTATGGCC GGGCAGAGGCTAGTGCTGACCTATGGGCTGATGCTATGGCC < 41bp 0.74006500318457 0.525552957902701 0.056609005 0.14527652 prediction 0.429024090563737 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64958967 chrX:64958970 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_85949 0 0 5 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64958960-64958980
64251 chr16 70170227 70170227 1 + G T UCEC 70170225 + 70170205 70170245 41 TGGGCGAGTCTCCTGCAGTGCAGGGCTACTTTGTCCTGGCA TGGGCGAGTCTCCTGCAGTGCATGGCTACTTTGTCCTGGCA < 41bp 0.71451137318224 0.354155572524362 0.8104155 0.07881379 prediction 0.42902274636448 Functional Loss - PDPR ENSG00000090857 CDS Human protein_coding chr16:70170225 chr16:70170227 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_85950 0 0 4 GRWD1 POSTAR2 ENCODE chr16:70170122-70170253
64251 chr9 123898152 123898152 1 + G T LUAD 123898150 + 123898130 123898170 41 ATGCATCTTTGCAGCAGACCCAGGGAGATCTCAGTGCCTAT ATGCATCTTTGCAGCAGACCCATGGAGATCTCAGTGCCTAT < 41bp 0.714509445258681 0.374263389424522 0.8857852 0.15408018 prediction 0.429018890517362 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898150 chr9:123898152 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_85953 0 0 12 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr9 123898153 123898153 1 + G T LUAD 123898150 + 123898130 123898170 41 ATGCATCTTTGCAGCAGACCCAGGGAGATCTCAGTGCCTAT ATGCATCTTTGCAGCAGACCCAGTGAGATCTCAGTGCCTAT < 41bp 0.714509445258681 0.324896485422682 0.8857852 0.2455756 prediction 0.429018890517362 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123898150 chr9:123898153 stopgain 0.998 0 24 hm5C_associated_SNPs_85954 0 0 12 BUD13 POSTAR2 ENCODE chr9:123898139-123898171
64251 chr11 66613484 66613484 1 + C T UCEC 66613482 + 66613462 66613502 41 CTGCTTCTGCTCCAGCCCCTCACGGACCCCAAGCTCTACGG CTGCTTCTGCTCCAGCCCCTCATGGACCCCAAGCTCTACGG < 41bp 0.825400057211052 0.610892748692467 0.213184 0.10695654 prediction 0.42901461703717 Functional Loss - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66613482 chr11:66613484 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_85957 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66613464-66613493
64251 chr3 126452019 126452019 1 + C T UCEC 126452017 + 126451997 126452037 41 CACTCCAAGGCATCCCTGCCCACGGGCGAAGGCAGCATCAG CACTCCAAGGCATCCCTGCCCATGGGCGAAGGCAGCATCAG < 41bp 0.812524795389795 0.598017876760968 0.42493013 0.4267356 prediction 0.429013837257653 Functional Loss - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126452017 chr3:126452019 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_85958 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:126452003-126452025
64251 chr8 11643696 11643696 1 + G A STAD 11643693 + 11643673 11643713 41 TCATGAAGGAGGCGTTTGGGCCCGAAGATGGGTTACAGAGG TCATGAAGGAGGCGTTTGGGCCCAAAGATGGGTTACAGAGG < 41bp 0.792608676291912 0.578102072703394 0.20420444 0.09279862 prediction 0.429013207177035 Functional Loss - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11643693 chr8:11643696 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_85959 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr8:11643696-11643697
64251 chr2 235950945 235950945 1 + G T BLCA 235950942 + 235950922 235950962 41 GCTCCTGGTCAGCGAGGTCACACGCCAGGCACCCAACCCTG GCTCCTGGTCAGCGAGGTCACACTCCAGGCACCCAACCCTG < 41bp 0.714504975654452 0.305111200005971 0.087752104 0.36195666 prediction 0.429009951308903 Functional Loss - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950942 chr2:235950945 nonsynonymous SNV 0.686 2 24 hm5C_associated_SNPs_85960 0 0 2 GRWD1 POSTAR2 ENCODE chr2:235950896-235950950
64251 chr19 17384931 17384931 1 + T C KIRP 17384930 + 17384910 17384950 41 CTGCAGCTGTCTGGCCTGACCTCCGACCCCCGCGAGCTCTG CTGCAGCTGTCTGGCCTGACCCCCGACCCCCGCGAGCTCTG < 41bp 0.714502728178938 0.475206856648344 0.35406023 0.20539248 prediction 0.429005456357876 Functional Loss - BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17384930 chr19:17384931 nonsynonymous SNV 0.722 3 22 hm5C_associated_SNPs_85964 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:17384914-17384964
64251 chr2 118582650 118582650 1 + C T rs185105293 118582647 + 118582627 118582667 41 TACCACTATGAGTTGCTGAACTACATTGATTTGCCCGTCTT TACCACTATGAGTTGCTGAACTATATTGATTTGCCCGTCTT < 41bp 0.717430134769176 0.502928537888142 0.8780196 0.21744198 prediction 0.429003193762068 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582647 chr2:118582650 synonymous SNV . 0 24 hm5C_associated_SNPs_85965 0 0 4 GRWD1 POSTAR2 ENCODE chr2:118582605-118582677
64251 chr12 57969023 57969023 1 + G T LUSC 57969020 + 57969000 57969040 41 GCAAGATGGAAGTGACCGGGCGGGAGCTCTCATCCTGCCAG GCAAGATGGAAGTGACCGGGCGGTAGCTCTCATCCTGCCAG < 41bp 0.937819189014099 0.723320315606878 0.907072 0.5378709 prediction 0.428997746814443 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57969020 chr12:57969023 stopgain 0.990 1 24 hm5C_associated_SNPs_85969 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:57969011-57969049
64251 chr2 110049003 110049003 1 + G A DLBC 110049000 + 110048980 110049020 41 AGCCCCAGAAGAGTGACGAGCTGGAGCTGCACAAGGGAGAG AGCCCCAGAAGAGTGACGAGCTGAAGCTGCACAAGGGAGAG < 41bp 0.770090923778204 0.555596944828567 0.23772427 0.1570476 prediction 0.428987957899274 Functional Loss - SH3RF3 ENSG00000172985 CDS Human protein_coding chr2:110049000 chr2:110049003 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_85977 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:110048979-110049008
64251 chrX 152036208 152036208 1 + G T LUAD 152036206 + 152036186 152036226 41 AGCTCTCCCGAGACTCGACACTGGGTGGGAAGGTAAGGCCT AGCTCTCCCGAGACTCGACACTTGGTGGGAAGGTAAGGCCT < 41bp 0.913758101747809 0.6992667980269 0.5828451 0.43104023 prediction 0.428982607441818 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152036206 chrX:152036208 synonymous SNV . 0 23 hm5C_associated_SNPs_85980 0 0 2 EFTUD2 POSTAR2 ENCODE chrX:152036207-152036215
64251 chr6 151773695 151773695 1 + G A GBM 151773692 + 151773672 151773712 41 CGGAAAGTGATGGCTGTCGTCCCGGCGTCTCTCTCAGGACA CGGAAAGTGATGGCTGTCGTCCCAGCGTCTCTCTCAGGACA < 41bp 0.798514171589501 0.584024479468972 0.40409818 0.33131325 prediction 0.428979384241058 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151773692 chr6:151773695 synonymous SNV . 0 24 hm5C_associated_SNPs_85981 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:151773680-151773700
64251 chr20 18296268 18296268 1 + C T UCEC 18296266 + 18296246 18296286 41 TTCAGCCTAAAGAAGAGCCTCGCCAGACACCAGAAGGCACA TTCAGCCTAAAGAAGAGCCTCGTCAGACACCAGAAGGCACA < 41bp 0.714487772849546 0.435781536853469 0.63254136 0.23300299 prediction 0.428975545699091 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296266 chr20:18296268 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_85984 0 0 2 GRWD1 POSTAR2 ENCODE chr20:18296222-18296279
64251 chr18 54603058 54603058 1 + G A LUSC 54603055 + 54603035 54603075 41 CCTCTGAGCCCAGCAGCTGACTCGGCCCGCTCTGCGAGGCA CCTCTGAGCCCAGCAGCTGACTCAGCCCGCTCTGCGAGGCA < 41bp 0.714484812785054 0.483058144736162 0.55539423 0.4292441 prediction 0.428969625570109 Functional Loss - WDR7 ENSG00000091157 CDS Human protein_coding chr18:54603055 chr18:54603058 synonymous SNV . 0 24 hm5C_associated_SNPs_85986 0 0 1 DGCR8 POSTAR2 ENCODE chr18:54603021-54603058
64251 chr14 24113673 24113673 1 + T C COAD 24113672 + 24113652 24113692 41 TGCTGGGTCTCACTAGAACACTGGCATTGGAGCTGGCCCCC TGCTGGGTCTCACTAGAACACCGGCATTGGAGCTGGCCCCC < 41bp 0.785667073749315 0.571182893257294 0.127049 0.077207655 prediction 0.428968360984042 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113672 chr14:24113673 nonsynonymous SNV 0.003 4 22 hm5C_associated_SNPs_85987 0 0 5 GRWD1 POSTAR2 ENCODE chr14:24113650-24113697
64251 chr3 183474355 183474355 1 + G A COAD 183474352 + 183474332 183474372 41 TCCAAGCCCATCACCATTGCCTCGAACCCCGACTTCCACTC TCCAAGCCCATCACCATTGCCTCAAACCCCGACTTCCACTC < 41bp 0.788634514219903 0.574151389291199 0.73776877 0.09914708 prediction 0.42896624985741 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183474352 chr3:183474355 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_85988 0 0 2 BUD13 POSTAR2 ENCODE chr3:183474321-183474380
64251 chr15 67879196 67879196 1 + G T LUAD 67879193 + 67879173 67879213 41 TTTACTTATAGGTGAATACTCGGGCCGGACCCTCTCAACAC TTTACTTATAGGTGAATACTCGGTCCGGACCCTCTCAACAC < 41bp 0.714481827281844 0.316505522041917 0.92209303 0.23901245 prediction 0.428963654563687 Functional Loss - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:67879193 chr15:67879196 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_85990 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:67879186-67879215
64251 chr12 4766925 4766925 1 + G A rs148477287 4766922 + 4766902 4766942 41 CTGCTATTATAGGAATGGGACGCGAGAGATAAAGATTCTAT CTGCTATTATAGGAATGGGACGCAAGAGATAAAGATTCTAT < 41bp 0.764343919005267 0.549874268221926 0.15706918 0.15437716 prediction 0.428939301566682 Functional Loss - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4766922 chr12:4766925 synonymous SNV . 0 24 hm5C_associated_SNPs_86000 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:4766919-4766950
64251 chr19 36606164 36606164 1 - C G rs45471297 36606165 - 36606145 36606185 41 AGGCGGCGAAGACTGAAGCCCGGAGGTAGGAGTGGCAAGAG AGGCGGCGAAGACTGAAGCCCCGAGGTAGGAGTGGCAAGAG < 41bp 0.880922554261214 0.666458309469022 0.8905312 0.51688814 prediction 0.428928489584384 Functional Loss - POLR2I;TBCB ENSG00000105254;ENSG00000105258 UTR5 Human other chr19:36606165 chr19:36606164 . . 0 22 hm5C_associated_SNPs_86005 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:36606164-36606165
64251 chr16 88039846 88039846 1 + C T DLBC 88039843 + 88039823 88039863 41 AGTCAGAGCATCGGGAGCAACGTCACGCTCATCACCCTGAA AGTCAGAGCATCGGGAGCAACGTTACGCTCATCACCCTGAA < 41bp 0.715299602441007 0.500846936545042 0.27729547 0.26800317 prediction 0.42890533179193 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88039843 chr16:88039846 synonymous SNV . 0 24 hm5C_associated_SNPs_86010 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:88039844-88039867
64251 chr1 2240601 2240601 1 + G A rs112501347 2240598 + 2240578 2240618 41 TGCTCTGGACTGAGGGGTCCCAGGCCCCGAGGGGTGCACGC TGCTCTGGACTGAGGGGTCCCAGACCCCGAGGGGTGCACGC < 41bp 0.757887572804652 0.543435358239921 0.8907476 0.7315335 prediction 0.428904429129462 Functional Loss - SKI ENSG00000157933 UTR3 Human protein_coding chr1:2240598 chr1:2240601 . . 0 24 hm5C_associated_SNPs_86011 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2240409-2240717
64251 chr11 65088659 65088659 1 + C T UCS 65088657 + 65088637 65088677 41 ACCGTGTGTGGGCGGGAGCTCCCGGACGGCCCATCCCCTCT ACCGTGTGTGGGCGGGAGCTCCTGGACGGCCCATCCCCTCT < 41bp 0.798567700435562 0.584118524968977 0.37211412 0.23203614 prediction 0.428898350933171 Functional Loss - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088657 chr11:65088659 nonsynonymous SNV 0.450 0 23 hm5C_associated_SNPs_86015 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:65088640-65088660
64251 chr17 46196139 46196139 1 + G T LUAD 46196136 + 46196116 46196156 41 AGTTCATTGAGAAGCGACGACAAGGTCTGCAGCACTTCCTT AGTTCATTGAGAAGCGACGACAATGTCTGCAGCACTTCCTT < 41bp 0.71444638114752 0.303302854220282 0.12953803 0.0657931 prediction 0.42889276229504 Functional Loss - SNX11 ENSG00000002919 CDS Human protein_coding chr17:46196136 chr17:46196139 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86016 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr17:46196095-46196148
64251 chr12 49888574 49888574 1 + C T UCEC 49888571 + 49888551 49888591 41 CCTGCCGCAGAACCAAGTAACGGCATCCCAGATTCCAGTAA CCTGCCGCAGAACCAAGTAACGGTATCCCAGATTCCAGTAA < 41bp 0.737542254646134 0.523098309598942 0.3293191 0.17581329 prediction 0.428887890094384 Functional Loss - SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888571 chr12:49888574 synonymous SNV . 0 24 hm5C_associated_SNPs_86022 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:49888551-49888591
64251 chr19 19790285 19790285 1 + C T UCEC 19790283 + 19790263 19790303 41 TGGTGCACGGCGCACAGTAACACCAACTCGAAAGAGACCTT TGGTGCACGGCGCACAGTAACATCAACTCGAAAGAGACCTT < 41bp 0.853136746122082 0.638694401591367 0.016824186 0.009015709 prediction 0.428884689061429 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790283 chr19:19790285 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_86023 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19790260-19790314
64251 chr15 34517318 34517318 1 + G T ACC 34517315 + 34517295 34517335 41 CTATAGGACGCAGCTGTTGCCATGACGGCCCAGGGGGGCCT CTATAGGACGCAGCTGTTGCCATTACGGCCCAGGGGGGCCT < 41bp 0.813091076086728 0.598650530480553 0.15433654 0.018710881 prediction 0.42888109121235 Functional Loss - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34517315 chr15:34517318 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_86026 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr15:34517296-34517327
64251 chr7 100773786 100773786 1 + C T LUSC 100773784 + 100773764 100773804 41 GATGAGATCAGCACCACAGACGCGATCTTCGTCCAGCGGGA GATGAGATCAGCACCACAGACGTGATCTTCGTCCAGCGGGA < 41bp 0.838911474089363 0.62447112392046 0.27350694 0.36400032 prediction 0.428880700337806 Functional Loss - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100773784 chr7:100773786 nonsynonymous SNV 0.903 4 23 hm5C_associated_SNPs_86027 0 0 2 SND1 POSTAR2 ENCODE chr7:100773781-100773806
64251 chr6 43267398 43267398 1 + C T UCEC 43267395 + 43267375 43267415 41 CGGCGTCTGCTGCTGGTAGCCTACGTGAGTACCCTGGTGCT CGGCGTCTGCTGCTGGTAGCCTATGTGAGTACCCTGGTGCT < 41bp 0.729124462691651 0.514689665009318 0.43794858 0.362553 prediction 0.428869595364667 Functional Loss - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43267395 chr6:43267398 synonymous SNV . 0 24 hm5C_associated_SNPs_86029 0 0 1 EFTUD2 POSTAR2 ENCODE chr6:43267372-43267398
64251 chr12 132402037 132402037 1 + C T SARC 132402035 + 132402015 132402055 41 AGCCCTTCCCCGGTGGTCTTCACCGTGGGCTCTCCCCCGAG AGCCCTTCCCCGGTGGTCTTCATCGTGGGCTCTCCCCCGAG < 41bp 0.812834279025336 0.598400784999226 0.8323994 0.78911704 prediction 0.42886698805222 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132402035 chr12:132402037 nonsynonymous SNV 0.162 4 23 hm5C_associated_SNPs_86031 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:132402030-132402053
64251 chr10 5948357 5948357 1 + G A PAAD 5948354 + 5948334 5948374 41 AGAAGCAGAGGACAGTACGTCTCGGCTCTCTGCGGAGTCTG AGAAGCAGAGGACAGTACGTCTCAGCTCTCTGCGGAGTCTG < 41bp 0.820147994878036 0.605719599852262 0.10203859 0.022171259 prediction 0.428856790051549 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948354 chr10:5948357 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_86041 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5948344-5948365
64251 chr10 3151638 3151638 1 + C T UCEC 3151636 + 3151616 3151656 41 GTGTCACTGAACGGGAACCACGCCGTGCGCCTGCCGCTGAT GTGTCACTGAACGGGAACCACGTCGTGCGCCTGCCGCTGAT < 41bp 0.821560196685741 0.607136142259957 0.19041857 0.08727336 prediction 0.428848108851568 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3151636 chr10:3151638 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_86043 0 0 3 DDX24 POSTAR2 ENCODE chr10:3151622-3151666
64251 chr18 21057228 21057228 1 + C T rs56282762 21057226 + 21057206 21057246 41 TTCCGGGACTGCAGGAATGTCTCGCAGGTAGACGTGTAAAC TTCCGGGACTGCAGGAATGTCTTGCAGGTAGACGTGTAAAC < 41bp 0.714421190437254 0.42259439930511 0.18843344 0.08156076 prediction 0.428842380874508 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21057226 chr18:21057228 nonsynonymous SNV 0.979 0 23 hm5C_associated_SNPs_86045 0 0 1 PRPF8 POSTAR2 ENCODE chr18:21057195-21057272
64251 chr18 21057229 21057229 1 + G A UCEC 21057226 + 21057206 21057246 41 TTCCGGGACTGCAGGAATGTCTCGCAGGTAGACGTGTAAAC TTCCGGGACTGCAGGAATGTCTCACAGGTAGACGTGTAAAC < 41bp 0.714421190437254 0.472973231243052 0.18843344 0.08509681 prediction 0.428842380874508 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21057226 chr18:21057229 synonymous SNV . 0 24 hm5C_associated_SNPs_86046 0 0 1 PRPF8 POSTAR2 ENCODE chr18:21057195-21057272
64251 chr7 112112906 112112906 1 + G A COAD 112112903 + 112112883 112112923 41 GCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGGTAGGTT GCTTAAAACGATGAAGATTTCTCATTTCGAAAGGGTAGGTT < 41bp 0.714420718397822 0.493096980249211 0.030505806 0.025634319 prediction 0.428841436795644 Functional Loss - IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112903 chr7:112112906 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_86048 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:112112883-112112906
64251 chr7 112112905 112112905 1 + C T SKCM 112112903 + 112112883 112112923 41 GCTTAAAACGATGAAGATTTCTCGTTTCGAAAGGGTAGGTT GCTTAAAACGATGAAGATTTCTTGTTTCGAAAGGGTAGGTT < 41bp 0.714420718397822 0.428647387327071 0.030505806 0.033852845 prediction 0.428841436795644 Functional Loss - IFRD1 ENSG00000006652 CDS Human protein_coding chr7:112112903 chr7:112112905 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_86049 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:112112883-112112906
64251 chr8 23429093 23429093 1 + G A rs116050502 23429090 + 23429070 23429110 41 CAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACC CAGGCGGGCTGGCCGGGGCCCTCACCGCGGCCGCCACGACC < 41bp 0.714416393476234 0.460286590446516 0.5046068 0.33920604 prediction 0.428832786952469 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429090 chr8:23429093 nonsynonymous SNV 0.912 4 24 hm5C_associated_SNPs_86051 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr8 23429092 23429092 1 + C T CESC 23429090 + 23429070 23429110 41 CAGGCGGGCTGGCCGGGGCCCTCGCCGCGGCCGCCACGACC CAGGCGGGCTGGCCGGGGCCCTTGCCGCGGCCGCCACGACC < 41bp 0.714416393476234 0.45505580714022 0.5046068 0.49016285 prediction 0.428832786952469 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429090 chr8:23429092 synonymous SNV . 0 23 hm5C_associated_SNPs_86052 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr16 29819148 29819148 1 + C T PAAD 29819146 + 29819126 29819166 41 CCACTGTGGCAAGAGCTTCTCCCGGTGTGCACGGGGCCTCG CCACTGTGGCAAGAGCTTCTCCTGGTGTGCACGGGGCCTCG < 41bp 0.775364304915896 0.560950097179733 0.8239963 0.63156873 prediction 0.428828415472327 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819146 chr16:29819148 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_86053 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:29819134-29819158
64251 chr6 35255444 35255444 1 + T C GBM 35255443 + 35255423 35255463 41 AAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAA AAGGCTATGACCCCAGCACCCCGGAAGCCGTCCAACTGGAA < 41bp 0.827816309324571 0.613406285355706 0.3737674 0.36570972 prediction 0.42882004793773 Functional Loss - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35255443 chr6:35255444 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_86056 0 0 1 SRSF1 POSTAR2 ENCODE chr6:35255436-35255643
64251 chr3 173322457 173322457 1 + G T LUSC 173322455 + 173322435 173322475 41 TGATGGCATGCTTGGTACACCGGGGATTGGGTGCCCCATTG TGATGGCATGCTTGGTACACCGTGGATTGGGTGCCCCATTG < 41bp 0.846972769367711 0.632566733964114 0.91273105 0.3587844 prediction 0.428812070807194 Functional Loss - NLGN1 ENSG00000169760 CDS Human protein_coding chr3:173322455 chr3:173322457 synonymous SNV . 0 23 hm5C_associated_SNPs_86058 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:173322452-173322512
64251 chr14 77242566 77242566 1 + G A SKCM 77242563 + 77242543 77242583 41 TGGACGTGGAGCGCCTGGGCCGCGATGACTTCCGCAAGGAG TGGACGTGGAGCGCCTGGGCCGCAATGACTTCCGCAAGGAG < 41bp 0.808911828440831 0.594506754781337 0.5847313 0.25298113 prediction 0.428810147318989 Functional Loss - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77242563 chr14:77242566 nonsynonymous SNV 0.618 1 24 hm5C_associated_SNPs_86059 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:77242532-77242567
64251 chr7 100468072 100468072 1 + C T UCEC 100468069 + 100468049 100468089 41 CACGACATGAACCACCCGCCCAGCGGGGAGTACTTTGGTGA CACGACATGAACCACCCGCCCAGTGGGGAGTACTTTGGTGA < 41bp 0.716375190816453 0.501971743575718 0.6976861 0.46311408 prediction 0.42880689448147 Functional Loss - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100468069 chr7:100468072 synonymous SNV . 0 24 hm5C_associated_SNPs_86062 0 0 1 RPS3 POSTAR2 ENCODE chr7:100467984-100468073
64251 chr10 13246254 13246254 1 + C T GBM 13246251 + 13246231 13246271 41 CACTTCAAGCTGCTGGAGACCTGCGTCAGTGAGCAGCATGA CACTTCAAGCTGCTGGAGACCTGTGTCAGTGAGCAGCATGA < 41bp 0.714401518151477 0.494243607418251 0.13430461 0.07332736 prediction 0.428803036302954 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13246251 chr10:13246254 synonymous SNV . 0 24 hm5C_associated_SNPs_86063 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:13246227-13246255
64251 chr10 18957571 18957571 1 + C T UCEC 18957568 + 18957548 18957588 41 ATATTGGTGGTCAGGAGTCTCTGCGATCATCCTGGAACACA ATATTGGTGGTCAGGAGTCTCTGTGATCATCCTGGAACACA < 41bp 0.7160820665347 0.501682755533991 0.18575484 0.08493358 prediction 0.428798622001418 Functional Loss - ARL5B ENSG00000165997 CDS Human protein_coding chr10:18957568 chr10:18957571 stopgain 0.987 1 24 hm5C_associated_SNPs_86065 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:18957540-18957592
64251 chr19 47646784 47646784 1 + G A BLCA 47646781 + 47646761 47646801 41 TCTCGGGTGCTTCTTGTCGGCTTGAAAGGACTTGGGGCTGA TCTCGGGTGCTTCTTGTCGGCTTAAAAGGACTTGGGGCTGA < 41bp 0.751928636944047 0.537531162608432 0.39901567 0.35518032 prediction 0.428794948671231 Functional Loss - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47646781 chr19:47646784 synonymous SNV . 0 24 hm5C_associated_SNPs_86067 0 0 31 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47646752-47646786
64251 chr10 126673679 126673679 1 + C T rs115731809 126673677 + 126673657 126673697 41 ACCAAATCTGGCAGGATCTGCTCGGGGAAGTGTTTTCCTGG ACCAAATCTGGCAGGATCTGCTTGGGGAAGTGTTTTCCTGG < 41bp 0.80828414260037 0.593886953482274 0.6428088 0.5014717 prediction 0.42879437823619 Functional Loss - ZRANB1 ENSG00000019995 UTR3 Human protein_coding chr10:126673677 chr10:126673679 . . 0 23 hm5C_associated_SNPs_86069 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:126673655-126673684
64251 chr19 54967885 54967885 1 + G A CESC 54967882 + 54967862 54967902 41 TGGAGTGTGAGGACCCGGAGCGAGAGCTGAAGAAGCAGAAG TGGAGTGTGAGGACCCGGAGCGAAAGCTGAAGAAGCAGAAG < 41bp 0.714388398050016 0.464073235979566 0.7538344 0.23353583 prediction 0.428776796100032 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967882 chr19:54967885 nonsynonymous SNV 0.903 1 24 hm5C_associated_SNPs_86076 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:54967843-54967885
64251 chr12 69127366 69127366 1 + G T BLCA 69127363 + 69127343 69127383 41 CTGAAGATGATAATGCTATCCGAGAACATTTGTGCATCAGA CTGAAGATGATAATGCTATCCGATAACATTTGTGCATCAGA < 41bp 0.714388074992571 0.335632567596174 0.32136318 0.18390271 prediction 0.428776149985141 Functional Loss - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69127363 chr12:69127366 stopgain 0.689 1 24 hm5C_associated_SNPs_86077 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69127354-69127383
64251 chr3 10251376 10251376 1 + G T UCEC 10251372 + 10251352 10251392 41 CCTCCCCACTTCGTCTGATTCAAAGGTAAATCCACCCCTCG CCTCCCCACTTCGTCTGATTCAAATGTAAATCCACCCCTCG < 41bp 0.748522666474955 0.534135788171921 0.750028 0.22227728 prediction 0.428773756606068 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10251372 chr3:10251376 nonsynonymous SNV 0.652 1 25 hm5C_associated_SNPs_86078 0 0 1 BUD13 POSTAR2 ENCODE chr3:10251361-10251404
64251 chr17 75210084 75210084 1 + C T SKCM 75210081 + 75210061 75210101 41 ACCTCCTCCAGCCAGTCCCACTCCAGCTCCATGATCTCCAG ACCTCCTCCAGCCAGTCCCACTCTAGCTCCATGATCTCCAG < 41bp 0.721869381651742 0.507482662031996 0.68241847 0.21455842 prediction 0.428773439239493 Functional Loss - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75210081 chr17:75210084 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_86079 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:75210075-75210101
64251 chr19 1295574 1295574 1 + G T LUAD 1295571 + 1295551 1295591 41 GCAGGCGCGGGGGACGACGGCGGGGGCTACACGGTGGAGGT GCAGGCGCGGGGGACGACGGCGGTGGCTACACGGTGGAGGT < 41bp 0.940802079569262 0.726415821754057 0.91363096 0.83919656 prediction 0.428772515630409 Functional Loss - EFNA2 ENSG00000099617 CDS Human protein_coding chr19:1295571 chr19:1295574 synonymous SNV . 0 24 hm5C_associated_SNPs_86080 0 0 2 DDX3X POSTAR2 ENCODE chr19:1295539-1295592
64251 chr1 9661280 9661280 1 + C T CESC 9661278 + 9661258 9661298 41 TGGGGCCAGCGGACACTTCGCCCCAGGCACCACTGTGCCCC TGGGGCCAGCGGACACTTCGCCTCAGGCACCACTGTGCCCC < 41bp 0.714383959289271 0.435185231627712 0.3006469 0.18904093 prediction 0.428767918578542 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9661278 chr1:9661280 nonsynonymous SNV 0.013 0 23 hm5C_associated_SNPs_86083 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:9661271-9661328
64251 chr20 61443914 61443914 1 + C T UCEC 61443912 + 61443892 61443932 41 AAGGTGGAGGAGGAAGGAAGCCCCGGGGACCCCGACCACGA AAGGTGGAGGAGGAAGGAAGCCTCGGGGACCCCGACCACGA < 41bp 0.714382423546454 0.47141835373654 0.35253787 0.20108628 prediction 0.428764847092909 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61443912 chr20:61443914 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_86085 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr20:61443900-61443920
64251 chr10 13237118 13237118 1 + G A UCEC 13237115 + 13237095 13237135 41 ACAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAGTTCC ACAGCCCCCTGCTCAGCCTCCACAGACAGGATCCGAGTTCC < 41bp 0.807874819361935 0.593493463314624 0.03141573 0.01241675 prediction 0.428762712094622 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13237115 chr10:13237118 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_86086 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:13237115-13237158
64251 chrX 37545364 37545364 1 + C T rs28940593 37545362 + 37545342 37545382 41 TCTCGCTACTGCCTTGCGCGCTCGTGCAGCTCACGCTTCTC TCTCGCTACTGCCTTGCGCGCTTGTGCAGCTCACGCTTCTC < 41bp 0.819327479844733 0.604954823048841 0.19040391 0.1495874 prediction 0.428745313591785 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37545362 chrX:37545364 synonymous SNV . 0 23 hm5C_associated_SNPs_86090 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:37545356-37545453
64251 chr11 1482482 1482482 1 + G A rs3750921 1482479 + 1482459 1482499 41 GCCTGGTGGCCTTCTGGGGCCAGGACCCCTGGTGGGCAACG GCCTGGTGGCCTTCTGGGGCCAGAACCCCTGGTGGGCAACG < 41bp 0.767644275849684 0.553276009356833 0.7006649 0.45551118 prediction 0.428736532985701 Functional Loss - BRSK2 ENSG00000174672 UTR3 Human protein_coding chr11:1482479 chr11:1482482 . . 0 24 hm5C_associated_SNPs_86094 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:1482455-1482494
64251 chr19 35551594 35551594 1 + C T LUSC 35551592 + 35551572 35551612 41 CCGTGGCCCAGGCCTCTCCCCACGGTCTGCAGCTGGGGGTG CCGTGGCCCAGGCCTCTCCCCATGGTCTGCAGCTGGGGGTG < 41bp 0.842230355551703 0.627868310014569 0.8830006 0.7382971 prediction 0.428724091074267 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35551592 chr19:35551594 synonymous SNV . 0 23 hm5C_associated_SNPs_86097 0 0 4 DDX3X POSTAR2 ENCODE chr19:35551563-35551632
64251 chr2 264985 264985 1 + G A rs11691572 264982 + 264962 265002 41 AAGATGGCGGAACAGGCTACCAAGTCCGTGCTGTTTGTGTG AAGATGGCGGAACAGGCTACCAAATCCGTGCTGTTTGTGTG < 41bp 0.714360964020551 0.476223041031437 0.29983956 0.36072063 prediction 0.428721928041103 Functional Loss - ACP1 ENSG00000143727 CDS Human protein_coding chr2:264982 chr2:264985 synonymous SNV . 0 24 hm5C_associated_SNPs_86098 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:264920-265000
64251 chr12 95694210 95694210 1 + C T LUAD 95694208 + 95694188 95694228 41 ATGTGAGAGTGAAGATGAACCACAAGCAGATGGAAGTGGTC ATGTGAGAGTGAAGATGAACCATAAGCAGATGGAAGTGGTC < 41bp 0.714360073125646 0.458129247459503 0.007628888 0.003344506 prediction 0.428720146251291 Functional Loss - VEZT ENSG00000028203 CDS Human protein_coding chr12:95694208 chr12:95694210 stopgain 0.002 0 23 hm5C_associated_SNPs_86100 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:95694143-95694213
64251 chr3 49212334 49212334 1 + G A SKCM 49212331 + 49212311 49212351 41 CCTGGGTGGCCTGCAGCAGCCTGGGCCCCACAACTTCTACT CCTGGGTGGCCTGCAGCAGCCTGAGCCCCACAACTTCTACT < 41bp 0.795690669135251 0.581333314755951 0.14713949 0.086844295 prediction 0.4287147087586 Functional Loss - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49212331 chr3:49212334 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86103 0 0 1 RBM15 POSTAR2 ENCODE chr3:49212274-49212340
64251 chr1 51439625 51439625 1 + G A rs142420524 51439622 + 51439602 51439642 41 TGCTACTTAGAGGTGCTAATCCCGATTTGAAAGACCGAACT TGCTACTTAGAGGTGCTAATCCCAATTTGAAAGACCGAACT < 41bp 0.769495748129435 0.555141677394737 0.42862177 0.4542772 prediction 0.428708141469395 Functional Loss - CDKN2C ENSG00000123080 CDS Human protein_coding chr1:51439622 chr1:51439625 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_86105 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:51439600-51439660
64251 chr3 42703096 42703096 1 + C T LIHC 42703093 + 42703073 42703113 41 ATCTGTGAGAAGAAGTTCTACACCATGGCCCACGTGCGTAA ATCTGTGAGAAGAAGTTCTACACTATGGCCCACGTGCGTAA < 41bp 0.742984684418688 0.528633440110638 0.036289215 0.029768914 prediction 0.4287024886161 Functional Loss - ZBTB47 ENSG00000114853 CDS Human protein_coding chr3:42703093 chr3:42703096 synonymous SNV . 0 24 hm5C_associated_SNPs_86106 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr3:42703074-42703107
64251 chr1 65854059 65854059 1 + G T LUSC 65854056 + 65854036 65854076 41 ATTCCAGCTTCAGTTTCACACTGGATTCATACCACTGGACA ATTCCAGCTTCAGTTTCACACTGTATTCATACCACTGGACA < 41bp 0.714337463265543 0.32842691578578 0.3887667 0.13221458 prediction 0.428674926531086 Functional Loss - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65854056 chr1:65854059 nonsynonymous SNV 0.977 5 24 hm5C_associated_SNPs_86117 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr1:65854040-65854060
64251 chr9 4663041 4663041 1 + G C CESC 4663040 + 4663020 4663060 41 CACAAGGGCCGCCCTGATGTCGAGGTTCATCCTGAACCACC CACAAGGGCCGCCCTGATGTCCAGGTTCATCCTGAACCACC < 41bp 0.894309894573164 0.679975242081525 0.9403974 0.9054512 prediction 0.428669304983277 Functional Loss - PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4663040 chr9:4663041 synonymous SNV . 0 22 hm5C_associated_SNPs_86119 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:4663041-4663063
64251 chr4 4292001 4292001 1 + A C rs560164607 4292000 + 4291980 4292020 41 TGTCGTGATGATTCCGCGGCCAGCGGATCGCTGCGAGTGGC TGTCGTGATGATTCCGCGGCCCGCGGATCGCTGCGAGTGGC < 41bp 0.779917518312777 0.565583062762565 0.87128556 0.6596328 prediction 0.428668911100424 Functional Loss - ZBTB49 ENSG00000168826 UTR5 Human protein_coding chr4:4292000 chr4:4292001 . . 0 22 hm5C_associated_SNPs_86121 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:4292000-4292001
64251 chr12 132281733 132281733 1 + G A STAD 132281730 + 132281710 132281750 41 TCTTGCCTTTCAGAAGTCCCCACGAGAAGAAGAAGAAGAGG TCTTGCCTTTCAGAAGTCCCCACAAGAAGAAGAAGAAGAGG < 41bp 0.767657443982315 0.553324383714446 0.27299434 0.1329962 prediction 0.428666120535739 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281730 chr12:132281733 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86122 0 0 1 BUD13 POSTAR2 ENCODE chr12:132281713-132281784
64251 chr2 163204219 163204219 1 + C T SKCM 163204216 + 163204196 163204236 41 ACTTATTCCTCAGCTGGTGACTCCGTGTATACTTACTTCAG ACTTATTCCTCAGCTGGTGACTCTGTGTATACTTACTTCAG < 41bp 0.746604998010011 0.532277645526777 0.082327545 0.04309103 prediction 0.428654704966469 Functional Loss - GCA ENSG00000115271 CDS Human protein_coding chr2:163204216 chr2:163204219 synonymous SNV . 0 24 hm5C_associated_SNPs_86128 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:163204214-163204236
64251 chr2 3482694 3482694 1 + G T GBM 3482691 + 3482671 3482711 41 AGAGATCTTAAGGATGGATCCAAGAAACGCAGTGGTAAGAT AGAGATCTTAAGGATGGATCCAATAAACGCAGTGGTAAGAT < 41bp 0.714325360595005 0.321999023661537 0.48034915 0.105036765 prediction 0.428650721190009 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3482691 chr2:3482694 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_86129 0 0 1 PPIG POSTAR2 ENCODE chr2:3482693-3482705
64251 chr19 36245352 36245352 1 + C T UCEC 36245349 + 36245329 36245369 41 ACTCAGAAAGCATGAAGATCCTACGAGAGATGTACGAACGA ACTCAGAAAGCATGAAGATCCTATGAGAGATGTACGAACGA < 41bp 0.714322579500318 0.496256666546542 0.23420656 0.2086077 prediction 0.428645159000637 Functional Loss - LIN37 ENSG00000267796 CDS Human protein_coding chr19:36245349 chr19:36245352 stopgain 0.998 1 24 hm5C_associated_SNPs_86135 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:36245326-36245384
64251 chr10 5789847 5789847 1 + G A SKCM 5789844 + 5789824 5789864 41 TCTAATATTAACTGATCATCCAGGAAGAACAGGTAGACCAA TCTAATATTAACTGATCATCCAGAAAGAACAGGTAGACCAA < 41bp 0.760135305859208 0.545816393304713 0.90207684 0.14176086 prediction 0.428637825108991 Functional Loss - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5789844 chr10:5789847 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_86137 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5789777-5789859
64251 chr17 30362635 30362635 1 + G A UCEC 30362632 + 30362612 30362652 41 ACAACACTTAAGAACATTCTCACGATGACTGTTGAACTGGA ACAACACTTAAGAACATTCTCACAATGACTGTTGAACTGGA < 41bp 0.759527168603174 0.545211392958894 0.1897105 0.11691359 prediction 0.428631551288561 Functional Loss - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30362632 chr17:30362635 synonymous SNV . 0 24 hm5C_associated_SNPs_86140 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:30362626-30362648
64251 chr3 3178967 3178967 1 + G A UCEC 3178964 + 3178944 3178984 41 AATTATTTGTCAAAGAGAATCACGAATTAAGAATAGCAGGA AATTATTTGTCAAAGAGAATCACAAATTAAGAATAGCAGGA < 41bp 0.741988234907487 0.527676433674046 0.15241009 0.2577794 prediction 0.428623602466881 Functional Loss - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3178964 chr3:3178967 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_86142 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:3178950-3178998
64251 chrX 18912406 18912406 1 - C T STAD 18912409 - 18912389 18912429 41 ATCATGGTGCTGACGCTGCTCTCGGACACGGAGATGACCAG ATCATGGTGCTGACGCTGCTCTCAGACACGGAGATGACCAG < 41bp 0.785253223261762 0.57094400785894 0.1854263 0.18306965 prediction 0.428618430805643 Functional Loss - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912409 chrX:18912406 synonymous SNV . 0 24 hm5C_associated_SNPs_86143 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:18912396-18912428
64251 chr20 37570728 37570728 1 + G T LUAD 37570725 + 37570705 37570745 41 AGGCTCTCCTCTCTCAATTTCTGGATATGTGCATGGATCTG AGGCTCTCCTCTCTCAATTTCTGTATATGTGCATGGATCTG < 41bp 0.714303169978685 0.325183813556583 0.3821215 0.32312253 prediction 0.42860633995737 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570725 chr20:37570728 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_86147 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:37570719-37570750
64251 chr3 139065745 139065745 1 + G A UCEC 139065742 + 139065722 139065762 41 GAATCTGGTAGCCCAGAGACCAAGAAACCTACATTTATGGA GAATCTGGTAGCCCAGAGACCAAAAAACCTACATTTATGGA < 41bp 0.731458132404 0.517158421103789 0.06504688 0.16951132 prediction 0.428599422600423 Functional Loss - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139065742 chr3:139065745 synonymous SNV . 0 24 hm5C_associated_SNPs_86149 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:139065736-139065768
64251 chrX 30265555 30265555 1 + G C rs2074794 30265551 + 30265531 30265571 41 AGTGGGGTGCAGCGTCTGGTCAGCGGAGGGTGAATTCTCAG AGTGGGGTGCAGCGTCTGGTCAGCCGAGGGTGAATTCTCAG < 41bp 0.828819695858761 0.614524509326427 0.85539615 0.5755404 prediction 0.428590373064668 Functional Loss - MAGEB1 ENSG00000214107 UTR5 Human protein_coding chrX:30265551 chrX:30265555 . . 0 25 hm5C_associated_SNPs_86151 0 0 1 DDX3X POSTAR2 ENCODE chrX:30265543-30265584
64251 chr6 160517599 160517599 1 + G A UCEC 160517596 + 160517576 160517616 41 ACGGGATCCCCGAGTTCAGTCACGAGACTGCCGACTGCCAG ACGGGATCCCCGAGTTCAGTCACAAGACTGCCGACTGCCAG < 41bp 0.776188608640175 0.561894452999602 0.33512992 0.28123373 prediction 0.428588311281146 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160517596 chr6:160517599 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_86153 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:160517596-160517634
64251 chr22 40802206 40802206 1 + G A CESC 40802203 + 40802183 40802223 41 TCCCGGGTGCTGTTCCAGCTCACGCTGGGCATGCTGCACCT TCCCGGGTGCTGTTCCAGCTCACACTGGGCATGCTGCACCT < 41bp 0.818843170782732 0.604552452251791 0.18694934 0.07916731 prediction 0.428581437061882 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802203 chr22:40802206 synonymous SNV . 0 24 hm5C_associated_SNPs_86156 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:40802179-40802215
64251 chr6 24667297 24667297 1 + G A rs17243486 24667294 + 24667274 24667314 41 CGCGCTTCGTCACAAGGGTGCGAGGAAAGTCAGTGAGCAAA CGCGCTTCGTCACAAGGGTGCGAAGAAAGTCAGTGAGCAAA < 41bp 0.771888429140603 0.557600517141943 0.9197575 0.7686926 prediction 0.42857582399732 Functional Loss - ACOT13 ENSG00000112304 UTR5 Human protein_coding chr6:24667294 chr6:24667297 . . 0 24 hm5C_associated_SNPs_86160 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:24667280-24667300
64251 chr10 13687102 13687102 1 + G A rs144301860 13687099 + 13687079 13687119 41 GTGTGTGCCCCAGCTCGACTCTCGGTGGTCTCCAGGCTGCA GTGTGTGCCCCAGCTCGACTCTCAGTGGTCTCCAGGCTGCA < 41bp 0.71428601565006 0.465825536823545 0.8712369 0.31439692 prediction 0.42857203130012 Functional Loss - FRMD4A ENSG00000151474 UTR3 Human protein_coding chr10:13687099 chr10:13687102 . . 0 24 hm5C_associated_SNPs_86161 0 0 1 BUD13 POSTAR2 ENCODE chr10:13687023-13687114
64251 chr5 110443080 110443080 1 + C T UCEC 110443077 + 110443057 110443097 41 AACCTGGAATTATCAGAAATCTACAATAGGCGCTTACTTTC AACCTGGAATTATCAGAAATCTATAATAGGCGCTTACTTTC < 41bp 0.755131430544841 0.540858841840851 0.9273911 0.6927245 prediction 0.428545177407981 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110443077 chr5:110443080 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_86172 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110443064-110443091
64251 chr16 21261430 21261430 1 + C T SKCM 21261427 + 21261407 21261447 41 TCTTCTTCCAAGGGTACCTTCTCCAGATCATCCCCTTCAAA TCTTCTTCCAAGGGTACCTTCTCTAGATCATCCCCTTCAAA < 41bp 0.757465590446869 0.543198742529946 0.94268906 0.30113658 prediction 0.428533695833844 Functional Loss - ANKS4B ENSG00000175311 CDS Human protein_coding chr16:21261427 chr16:21261430 synonymous SNV . 0 24 hm5C_associated_SNPs_86177 0 0 2 RPS3 POSTAR2 ENCODE chr16:21261411-21261461
64251 chr5 149919746 149919746 1 + C T UCEC 149919743 + 149919723 149919763 41 TCCTGCACTCCTGGACGAACCTCCGGCTGCAGACACTGCCC TCCTGCACTCCTGGACGAACCTCTGGCTGCAGACACTGCCC < 41bp 0.714264808219867 0.484959793178965 0.17995116 0.06749675 prediction 0.428529616439734 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149919743 chr5:149919746 nonsynonymous SNV 0.964 3 24 hm5C_associated_SNPs_86178 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:149919713-149919751
64251 chr5 149901282 149901282 1 + G A SKCM 149901279 + 149901259 149901299 41 ACGCCTGGAACCGGGAGCTGCTGGACAAGTACTGTGTGGCC ACGCCTGGAACCGGGAGCTGCTGAACAAGTACTGTGTGGCC < 41bp 0.786373275075076 0.572111018317001 0.8054749 0.56725734 prediction 0.42852451351615 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149901279 chr5:149901282 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_86180 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:149901246-149901284
64251 chr6 26156993 26156993 1 + G A rs61729264 26156990 + 26156970 26157010 41 CCTAAGGCTAAAAAGGCAGGCGCGGCCAAGGCCAAGAAGCC CCTAAGGCTAAAAAGGCAGGCGCAGCCAAGGCCAAGAAGCC < 41bp 0.785777638960872 0.57152234831142 0.11129418 0.02597943 prediction 0.428510581298904 Functional Loss - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156990 chr6:26156993 synonymous SNV . 0 24 hm5C_associated_SNPs_86187 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:26156916-26157005
64251 chrX 152613304 152613304 1 + C T UCEC 152613302 + 152613282 152613322 41 ACAAATGCGGCAAGGCCTTCCGCCGGAGCTCCGGCCTCAGT ACAAATGCGGCAAGGCCTTCCGTCGGAGCTCCGGCCTCAGT < 41bp 0.714255008548836 0.472173557944225 0.33771515 0.34419668 prediction 0.428510017097671 Functional Loss - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152613302 chrX:152613304 synonymous SNV . 0 23 hm5C_associated_SNPs_86188 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:152613285-152613309
64251 chr11 85975253 85975253 1 + T C SKCM 85975252 + 85975232 85975272 41 GGAATATCCAGACGGACACTCTGGTGGCAATATTTGGAGGC GGAATATCCAGACGGACACTCCGGTGGCAATATTTGGAGGC < 41bp 0.714254429609775 0.466003394640433 0.49688026 0.7262645 prediction 0.42850885921955 Functional Loss - EED ENSG00000074266 CDS Human protein_coding chr11:85975252 chr11:85975253 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_86189 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:85975216-85975259
64251 chr13 24190167 24190167 1 + C T UCEC 24190164 + 24190144 24190184 41 TCAGCCACCAGTGATGCCATCTGCGGGGACTGCTTGCCAGG TCAGCCACCAGTGATGCCATCTGTGGGGACTGCTTGCCAGG < 41bp 0.714254290800089 0.482663736670888 0.1914616 0.14106116 prediction 0.428508581600178 Functional Loss - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24190164 chr13:24190167 synonymous SNV . 0 24 hm5C_associated_SNPs_86190 0 0 2 SND1 POSTAR2 ENCODE chr13:24190142-24190184
64251 chr2 27302058 27302058 1 + G A SKCM 27302055 + 27302035 27302075 41 TTCCAGTGGGGCCCTCAGCCCCGGGGGGCCCCAGGCCCAGA TTCCAGTGGGGCCCTCAGCCCCGAGGGGCCCCAGGCCCAGA < 41bp 0.81320744835332 0.598953275552822 0.8802777 0.057228804 prediction 0.428508345600996 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27302055 chr2:27302058 nonsynonymous SNV 0.112 1 24 hm5C_associated_SNPs_86191 0 0 1 RPS3 POSTAR2 ENCODE chr2:27302045-27302059
64251 chr2 233323043 233323043 1 + C T SKCM 233323041 + 233323021 233323061 41 GCTCACCAGCGAGGAGGACACGCTGACCCTCGTCACCGCTG GCTCACCAGCGAGGAGGACACGTTGACCCTCGTCACCGCTG < 41bp 0.714246040408256 0.450829584929922 0.15741539 0.12043056 prediction 0.428492080816513 Functional Loss - ALPI ENSG00000163295 CDS Human protein_coding chr2:233323041 chr2:233323043 synonymous SNV . 0 23 hm5C_associated_SNPs_86195 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:233323040-233323060
64251 chr3 129221605 129221605 1 + G T LUSC 129221603 + 129221583 129221623 41 AGGCTGAGCGCGAGCCCCTGCTGCTGTGCGCTACCTACCTC AGGCTGAGCGCGAGCCCCTGCTTCTGTGCGCTACCTACCTC < 41bp 0.714241369081961 0.392384879654449 0.20266074 0.1422804 prediction 0.428482738163922 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129221603 chr3:129221605 synonymous SNV . 0 23 hm5C_associated_SNPs_86205 0 0 1 BUD13 POSTAR2 ENCODE chr3:129221543-129221640
64251 chr14 77928570 77928570 1 + C T UCEC 77928567 + 77928547 77928587 41 CCCAATTTGTCTGATGAAAACAGCGTGGATGAAGTGGAGGT CCCAATTTGTCTGATGAAAACAGTGTGGATGAAGTGGAGGT < 41bp 0.714240401803182 0.490842232564865 0.102968305 0.06639966 prediction 0.428480803606365 Functional Loss - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928567 chr14:77928570 synonymous SNV . 0 24 hm5C_associated_SNPs_86206 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:77928528-77928584
64251 chr10 71871406 71871406 1 + C T UCEC 71871403 + 71871383 71871423 41 GACAGCGAGAGCATCGGCATCTACGTGCAGGAGATGGCCAA GACAGCGAGAGCATCGGCATCTATGTGCAGGAGATGGCCAA < 41bp 0.714234737688637 0.498340665965767 0.2520774 0.26544216 prediction 0.428469475377275 Functional Loss - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71871403 chr10:71871406 synonymous SNV . 0 24 hm5C_associated_SNPs_86208 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:71871405-71871436
64251 chr1 92528699 92528699 1 + T C UCEC 92528698 + 92528678 92528718 41 ATTCATGGAGGTTGAGATGGCTGAAGTCACAAAGATTTATG ATTCATGGAGGTTGAGATGGCCGAAGTCACAAAGATTTATG < 41bp 0.767084089073816 0.552855168925258 0.13355696 0.2701853 prediction 0.428457840297116 Functional Loss - EPHX4 ENSG00000172031 CDS Human protein_coding chr1:92528698 chr1:92528699 synonymous SNV . 0 22 hm5C_associated_SNPs_86211 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:92528692-92528703
64251 chr11 123498156 123498156 1 + G A rs571268493 123498153 + 123498133 123498173 41 CCCCAACTCAACCTAGACTCCAAGGTGGGGAGGGATGGGTC CCCCAACTCAACCTAGACTCCAAAGTGGGGAGGGATGGGTC < 41bp 0.714214966837867 0.487477262096399 0.7177454 0.41798753 prediction 0.428429933675734 Functional Loss - GRAMD1B ENSG00000023171 UTR3 Human protein_coding chr11:123498153 chr11:123498156 . . 0 24 hm5C_associated_SNPs_86221 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:123498126-123498157
64251 chr4 57889915 57889915 1 + G A GBM 57889912 + 57889892 57889932 41 CTTGTGGTATTCAGTATAGACAAGAGGTAGGTATCTTTGAT CTTGTGGTATTCAGTATAGACAAAAGGTAGGTATCTTTGAT < 41bp 0.75906182315912 0.5448491799291 0.40348494 0.19536367 prediction 0.428425286460039 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57889912 chr4:57889915 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86223 0 0 1 ZRANB2 POSTAR2 ENCODE chr4:57889893-57889918
64251 chr21 34923346 34923346 1 + T C SKCM 34923345 + 34923325 34923365 41 GCCTGGGCCGCTCATGGCAGCTGGGGCACTGGAGTTCTCGG GCCTGGGCCGCTCATGGCAGCCGGGGCACTGGAGTTCTCGG < 41bp 0.714210303644366 0.49988094084258 0.89439774 0.9050947 prediction 0.428420607288731 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34923345 chr21:34923346 synonymous SNV . 0 22 hm5C_associated_SNPs_86229 0 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34923163-34923531
64251 chr9 35674053 35674053 1 + G A rs2071676 35674050 + 35674030 35674070 41 TGCTGCTGTCACTGCTGCTTCTGGTGCCTGTCCATCCCCAG TGCTGCTGTCACTGCTGCTTCTGATGCCTGTCCATCCCCAG < 41bp 0.825649074431716 0.611443595133125 0.09024128 0.072245926 prediction 0.428410958597181 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35674050 chr9:35674053 nonsynonymous SNV 0.259 1 24 hm5C_associated_SNPs_86231 0 0 2 NOL12 POSTAR2 ENCODE chr9:35674049-35674117
64251 chr7 127724809 127724809 1 + G C LUSC 127724808 + 127724788 127724828 41 AGAAGCTGATGGAGAACATGCGCAATGACATTGCCAGTCAC AGAAGCTGATGGAGAACATGCCCAATGACATTGCCAGTCAC < 41bp 0.714203846266129 0.405745834866927 0.120798886 0.058198065 prediction 0.428407692532259 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127724808 chr7:127724809 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_86233 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:127724793-127724834
64251 chr6 36178155 36178155 1 + C T LGG 36178152 + 36178132 36178172 41 ATGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCGCCTG ATGCTAAAGACACAATTTTCCACTGAGCAGCTGTCCGCCTG < 41bp 0.751800970842925 0.537604820796838 0.23568913 0.09773415 prediction 0.428392300092175 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36178152 chr6:36178155 stopgain 1.000 1 24 hm5C_associated_SNPs_86239 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:36178140-36178160
64251 chrX 102884857 102884857 1 + C T rs34421776 102884855 + 102884835 102884875 41 AATTCCCAACATGGACAAACCACGCAAAGAAAATGAAGAAG AATTCCCAACATGGACAAACCATGCAAAGAAAATGAAGAAG < 41bp 0.714195851086479 0.461875892377849 0.0647777 0.021585822 prediction 0.428391702172958 Functional Loss - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102884855 chrX:102884857 nonsynonymous SNV 0.018 0 23 hm5C_associated_SNPs_86240 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:102884813-102884863
64251 chr11 61205237 61205237 1 + T C LUSC 61205236 + 61205216 61205256 41 GCCTCCATGGCAGGAGAGAACTGATGAATCCATAGAAACCA GCCTCCATGGCAGGAGAGAACCGATGAATCCATAGAAACCA < 41bp 0.714195314158368 0.472849287594673 0.4471459 0.36112183 prediction 0.428390628316736 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61205236 chr11:61205237 synonymous SNV . 0 22 hm5C_associated_SNPs_86241 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:61205213-61205251
64251 chr1 2160559 2160559 1 + G A BLCA 2160556 + 2160536 2160576 41 TCGTGCTTCGTGGTGGGAGGCGAGAAGCGCCTGTGTCTGCC TCGTGCTTCGTGGTGGGAGGCGAAAAGCGCCTGTGTCTGCC < 41bp 0.792157369613154 0.577968459712304 0.86075735 0.5963011 prediction 0.4283778198017 Functional Loss - SKI ENSG00000157933 CDS Human protein_coding chr1:2160556 chr1:2160559 synonymous SNV . 0 24 hm5C_associated_SNPs_86245 0 0 8 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr1:2160558-2160559
64251 chrX 73745706 73745706 1 + G A UCEC 73745703 + 73745683 73745723 41 CCACATCAGTGACTCCATCCCTGGACTTAAGAAGATCTACT CCACATCAGTGACTCCATCCCTGAACTTAAGAAGATCTACT < 41bp 0.783047562324424 0.568859453890238 0.29077703 0.12131211 prediction 0.428376216868371 Functional Loss - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73745703 chrX:73745706 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_86246 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:73745672-73745710
64251 chr9 2115922 2115922 1 + C T GBM 2115920 + 2115900 2115940 41 AGCGTGGAGGAAAAGATCCTCGCGGCCGCAAAATACAAGCT AGCGTGGAGGAAAAGATCCTCGTGGCCGCAAAATACAAGCT < 41bp 0.714177017988715 0.442681182576412 0.48512816 0.25939655 prediction 0.428354035977431 Functional Loss - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115920 chr9:2115922 nonsynonymous SNV 0.054 4 23 hm5C_associated_SNPs_86255 0 0 1 ZNF622 POSTAR2 ENCODE chr9:2115896-2115951
64251 chr9 72913007 72913007 1 + C T STAD 72913004 + 72912984 72913024 41 GAACTAAAGACCACGGAAAACTGCGAGAATCTTCAGCCCCA GAACTAAAGACCACGGAAAACTGTGAGAATCTTCAGCCCCA < 41bp 0.714171944809427 0.490101511133123 0.42209253 0.24955717 prediction 0.428343889618855 Functional Loss - SMC5 ENSG00000198887 CDS Human protein_coding chr9:72913004 chr9:72913007 synonymous SNV . 0 24 hm5C_associated_SNPs_86257 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr9:72912984-72913015
64251 chr19 17273174 17273174 1 + C T COAD 17273172 + 17273152 17273192 41 GTCCACAGGCCATCACTGCCCGCGACTCCATGGCCAAGTCT GTCCACAGGCCATCACTGCCCGTGACTCCATGGCCAAGTCT < 41bp 0.714171808944169 0.439373814814103 0.13832131 0.20973596 prediction 0.428343617888338 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17273172 chr19:17273174 synonymous SNV . 0 23 hm5C_associated_SNPs_86258 0 0 2 FMR1 POSTAR2 ENCODE chr19:17273159-17273193
64251 chr19 7705825 7705825 1 + G A rs144914451 7705822 + 7705802 7705842 41 GTTCAGTGAGCTAGGCCGCTCTCGTCTGGCAAAGGTGGTGA GTTCAGTGAGCTAGGCCGCTCTCATCTGGCAAAGGTGGTGA < 41bp 0.714160054353327 0.473043541575184 0.36141682 0.169294 prediction 0.428320108706654 Functional Loss - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7705822 chr19:7705825 nonsynonymous SNV 0.785 1 24 hm5C_associated_SNPs_86265 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:7705760-7705826
64251 chr10 104629849 104629849 1 + C T COAD 104629846 + 104629826 104629866 41 GGGACGCTGGGTCAGACCTACTACGGGCAGGTGCTGAAGAG GGGACGCTGGGTCAGACCTACTATGGGCAGGTGCTGAAGAG < 41bp 0.715652243378584 0.501497985274415 0.7974194 0.37173963 prediction 0.428308516208338 Functional Loss - AS3MT ENSG00000214435 CDS Human protein_coding chr10:104629846 chr10:104629849 synonymous SNV . 0 24 hm5C_associated_SNPs_86271 0 0 1 BUD13 POSTAR2 ENCODE chr10:104629785-104629926
64251 chr19 18978395 18978395 1 + G A rs147066799 18978392 + 18978372 18978412 41 CAGTCCCTGTGCTGGTTAGACACGGAGCGCTGCACACCGAA CAGTCCCTGTGCTGGTTAGACACAGAGCGCTGCACACCGAA < 41bp 0.776719561176607 0.562567429712259 0.39187062 0.16743964 prediction 0.428304262928696 Functional Loss - UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18978392 chr19:18978395 . . 0 24 hm5C_associated_SNPs_86274 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:18978368-18978418
64251 chr4 187113099 187113099 1 + C T rs574516881 187113097 + 187113077 187113117 41 CTGCAGAGGGTGGCGAGCTACGCGCGGAAATGGCAGCAGAT CTGCAGAGGGTGGCGAGCTACGTGCGGAAATGGCAGCAGAT < 41bp 0.787634082762278 0.573484477111852 0.5738361 0.71127045 prediction 0.428299211300852 Functional Loss - CYP4V2 ENSG00000145476 CDS Human protein_coding chr4:187113097 chr4:187113099 nonsynonymous SNV 0.017 0 23 hm5C_associated_SNPs_86278 0 0 2 DDX3X POSTAR2 ENCODE chr4:187113080-187113144
64251 chr11 47600835 47600835 1 + T C STAD 47600834 + 47600814 47600854 41 TGTGCAGGGACTGGGCGACCCTCCGTTCTGTTGCTGCCGGT TGTGCAGGGACTGGGCGACCCCCCGTTCTGTTGCTGCCGGT < 41bp 0.761941923708837 0.547792415104369 0.16943204 0.18240365 prediction 0.428299017208934 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600834 chr11:47600835 nonsynonymous SNV 0.638 1 22 hm5C_associated_SNPs_86279 0 0 12 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:47600815-47600843
64251 chr19 2813259 2813259 1 + G A rs531925340 2813256 + 2813236 2813276 41 CAGGTCGGGGGCTGCGAGCCCGAGCCGCAGGTCTGCTGAGG CAGGTCGGGGGCTGCGAGCCCGAACCGCAGGTCTGCTGAGG < 41bp 0.714147493527718 0.465424442722964 0.78605056 0.46203265 prediction 0.428294987055435 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2813256 chr19:2813259 synonymous SNV . 0 24 hm5C_associated_SNPs_86282 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:2813240-2813260
64251 chr15 91172657 91172657 1 + C T UCEC 91172654 + 91172634 91172674 41 TGAGCGGCCCGTCTCGGCGTCGGCAGCCTCCCGTCAGCCCT TGAGCGGCCCGTCTCGGCGTCGGTAGCCTCCCGTCAGCCCT < 41bp 0.714145733452488 0.492375350005463 0.32145238 0.1028935 prediction 0.428291466904977 Functional Loss - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91172654 chr15:91172657 stopgain 0.392 1 24 hm5C_associated_SNPs_86284 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91172657-91172695
64251 chr19 13136046 13136046 1 + G T KIRC 13136042 + 13136022 13136062 41 CATCCCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCC CATCCCGGCTGCTGGCCAAGCTGCTCAAGGACATCCGGCCC < 41bp 0.748741788344453 0.534597362069642 0.44518325 0.26576722 prediction 0.428288852549622 Functional Loss - NFIX ENSG00000008441 CDS Human protein_coding chr19:13136042 chr19:13136046 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_86285 0 0 4 GRWD1 POSTAR2 ENCODE chr19:13136007-13136104
64251 chr10 124895887 124895887 1 + G A UCEC 124895884 + 124895864 124895904 41 GCGCAGAGGTTTGCCCTGCCCGCGCACTACCTGGAGCGCTC GCGCAGAGGTTTGCCCTGCCCGCACACTACCTGGAGCGCTC < 41bp 0.788411951482147 0.574268128567299 0.26775512 0.17401874 prediction 0.428287645829696 Functional Loss - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124895884 chr10:124895887 synonymous SNV . 0 24 hm5C_associated_SNPs_86287 0 0 1 RBM15 POSTAR2 ENCODE chr10:124895864-124895890
64251 chr2 113953812 113953812 1 + G A SKCM 113953809 + 113953789 113953829 41 AGCCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACC AGCCCTTCCTTCAGCTGGCTCAGAATCCCACAGTGCCCACC < 41bp 0.828720649319878 0.614578761306832 0.8370801 0.4125451 prediction 0.428283776026092 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113953809 chr2:113953812 nonsynonymous SNV 0.336 0 24 hm5C_associated_SNPs_86291 0 0 2 DDX24 POSTAR2 ENCODE chr2:113953810-113953889
64251 chr21 34923302 34923302 1 + G T LUAD 34923300 + 34923280 34923320 41 ACTGGAGTTGTCGGGGCAGCCTGTGGCAACTGGGGCACTAG ACTGGAGTTGTCGGGGCAGCCTTTGGCAACTGGGGCACTAG < 41bp 0.714141114691362 0.374869922361059 0.8645794 0.4649682 prediction 0.428282229382725 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34923300 chr21:34923302 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_86292 0 0 30 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34923163-34923531
64251 chr20 61443915 61443915 1 + C T UCEC 61443913 + 61443893 61443933 41 AGGTGGAGGAGGAAGGAAGCCCCGGGGACCCCGACCACGAG AGGTGGAGGAGGAAGGAAGCCCTGGGGACCCCGACCACGAG < 41bp 0.791633564915225 0.577500770924044 0.5426248 0.3069123 prediction 0.428265587982362 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61443913 chr20:61443915 synonymous SNV . 0 23 hm5C_associated_SNPs_86294 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr20:61443900-61443920
64251 chr17 78085843 78085843 1 + C T SKCM 78085840 + 78085820 78085860 41 GCCTCCAGCCACCAGTTTCTCTCCACACACTACAACCTGCA GCCTCCAGCCACCAGTTTCTCTCTACACACTACAACCTGCA < 41bp 0.736832612148276 0.522709686270048 0.96188176 0.6393103 prediction 0.428245851756456 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78085840 chr17:78085843 synonymous SNV . 0 24 hm5C_associated_SNPs_86299 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:78085834-78085875
64251 chr21 30715070 30715070 1 + T C UCEC 30715069 + 30715049 30715089 41 CACAGCCACCTCTGAGCAAGCTGGGCCTGCGGAACAGTGTC CACAGCCACCTCTGAGCAAGCCGGGCCTGCGGAACAGTGTC < 41bp 0.751374748364767 0.537253165167556 0.8223996 0.8783396 prediction 0.428243166394423 Functional Loss - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30715069 chr21:30715070 synonymous SNV . 0 22 hm5C_associated_SNPs_86300 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:30715043-30715108
64251 chr1 63999194 63999194 1 + A C rs9436246 63999193 + 63999173 63999213 41 CTAGAAAAACTAGAGGTTGACAGTAAATTGATGCGTCACCA CTAGAAAAACTAGAGGTTGACCGTAAATTGATGCGTCACCA < 41bp 0.714116820501721 0.46534869728658 0.32784486 0.11314303 prediction 0.428233641003443 Functional Loss - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:63999193 chr1:63999194 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_86302 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:63999174-63999202
64251 chr19 58331207 58331207 1 + G A rs186687058 58331204 + 58331184 58331224 41 GAAGGTGGAGAGGAACCGTTCTCGGTGCACAGAGGCGGCTC GAAGGTGGAGAGGAACCGTTCTCAGTGCACAGAGGCGGCTC < 41bp 0.775236393229022 0.561122565442622 0.12780178 0.04987812 prediction 0.4282276555728 Functional Loss - ZNF552;FKBP1AP1 ENSG00000268750;ENSG00000269343;ENSG00000083828 UTR5;UTR3 Human other chr19:58331204 chr19:58331207 . . 0 24 hm5C_associated_SNPs_86304 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58331112-58331210
64251 chr12 3387622 3387622 1 + G A HNSC 3387619 + 3387599 3387639 41 GGGCTGCTGGGAGTGGGCATCTGGCTCTCCGTGTCCCAAGG GGGCTGCTGGGAGTGGGCATCTGACTCTCCGTGTCCCAAGG < 41bp 0.714113798410204 0.462358739055473 0.4826735 0.47748753 prediction 0.428227596820409 Functional Loss - TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3387619 chr12:3387622 stopgain 1.000 1 24 hm5C_associated_SNPs_86305 0 0 5 DDX3X POSTAR2 ENCODE chr12:3387584-3387628
64251 chr3 142403154 142403154 1 + G A UCEC 142403151 + 142403131 142403171 41 AGGAGCTGATGAAGCTTTCTCCCGAGGAATTACTGCTGCGA AGGAGCTGATGAAGCTTTCTCCCAAGGAATTACTGCTGCGA < 41bp 0.794158238476811 0.580044834713196 0.5187281 0.13471064 prediction 0.428226807527229 Functional Loss - PLS1 ENSG00000120756 CDS Human protein_coding chr3:142403151 chr3:142403154 nonsynonymous SNV 0.942 3 24 hm5C_associated_SNPs_86307 0 0 1 ZNF622 POSTAR2 ENCODE chr3:142403085-142403241
64251 chr19 17424912 17424912 1 + G A STAD 17424909 + 17424889 17424929 41 GCGGACTCCGTGTGCAAAGCCTCGGTGAGTGCGTGTTCCTG GCGGACTCCGTGTGCAAAGCCTCAGTGAGTGCGTGTTCCTG < 41bp 0.714113339567193 0.464994769552502 0.027847737 0.024077803 prediction 0.428226679134385 Functional Loss - DDA1 ENSG00000130311 CDS Human protein_coding chr19:17424909 chr19:17424912 synonymous SNV . 0 24 hm5C_associated_SNPs_86308 0 0 1 SF3B1 POSTAR2 ENCODE chr19:17424883-17424925
64251 chr19 14034533 14034533 1 + A C ESCA 14034529 + 14034509 14034549 41 TTTGAAAAGTTGGCGGAGGACTGTAAGCGGAGCATGGACAT TTTGAAAAGTTGGCGGAGGACTGTCAGCGGAGCATGGACAT < 41bp 0.714112605834088 0.288460671340334 0.37783492 0.13674173 prediction 0.428225211668176 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14034529 chr19:14034533 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_86310 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:14034500-14034540
64251 chr11 111835363 111835363 1 + C T LGG 111835360 + 111835340 111835380 41 TGCAGGACCTGCGACAAGATCTCCGGGATGGGGTGATCCTG TGCAGGACCTGCGACAAGATCTCTGGGATGGGGTGATCCTG < 41bp 0.778949281458479 0.564837133708397 0.4475202 0.3053338 prediction 0.428224295500164 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111835360 chr11:111835363 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86312 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:111835357-111835393
64251 chr1 32625049 32625049 1 + C T COAD 32625046 + 32625026 32625066 41 ATATTGCCTCTGGAACCTCTCAGCAGACCAAAATTGTCATT ATATTGCCTCTGGAACCTCTCAGTAGACCAAAATTGTCATT < 41bp 0.730999437953057 0.516890154001463 0.85438585 0.60972536 prediction 0.428218567903189 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32625046 chr1:32625049 stopgain 1.000 1 24 hm5C_associated_SNPs_86316 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:32625019-32625054
64251 chr8 11640783 11640783 1 + C T SKCM 11640780 + 11640760 11640800 41 TCAGTTGTCTTGGAGCTCTTCCCCAGTGGTCACACCCACCT TCAGTTGTCTTGGAGCTCTTCCCTAGTGGTCACACCCACCT < 41bp 0.768082321944624 0.553976704322707 0.18093553 0.20628008 prediction 0.428211235243834 Functional Loss - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640780 chr8:11640783 nonsynonymous SNV 0.047 1 24 hm5C_associated_SNPs_86318 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:11640761-11640786
64251 chr16 30770794 30770794 1 + C T COAD 30770792 + 30770772 30770812 41 GGAGGCCGCTGTGGTGGTGACTCGGAATTAGAACCCTGACT GGAGGCCGCTGTGGTGGTGACTTGGAATTAGAACCCTGACT < 41bp 0.775435036189747 0.561331655881653 0.07187736 0.0742493 prediction 0.428206760616188 Functional Loss - PHKG2 ENSG00000196118 CDS Human protein_coding chr16:30770792 chr16:30770794 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_86321 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30770757-30770831
64251 chr6 26251910 26251910 1 + C T OV 26251908 + 26251888 26251928 41 CCAGCTAAGTCCGCTCCCGCCCCGAAGAAGGGCTCCAAGAA CCAGCTAAGTCCGCTCCCGCCCTGAAGAAGGGCTCCAAGAA < 41bp 0.777281452376269 0.563181452273797 0.3467984 0.15729907 prediction 0.428200000204944 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26251908 chr6:26251910 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_86324 0 0 4 EIF3D POSTAR2 ENCODE chr6:26251884-26252016
64251 chr1 44684761 44684761 1 + C T COAD 44684758 + 44684738 44684778 41 AGGAGTACCTGCTACAGGAGCTGCGCAAGATTGAGGCCCGG AGGAGTACCTGCTACAGGAGCTGTGCAAGATTGAGGCCCGG < 41bp 0.747796948001094 0.533697548088991 0.8537915 0.86203253 prediction 0.428198799824205 Functional Loss - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44684758 chr1:44684761 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86325 0 0 5 LIN28B POSTAR2 ENCODE chr1:44684741-44684814
64251 chr4 77662867 77662867 1 + G A COAD 77662864 + 77662844 77662884 41 CCTTCGCCGGTGGCCGCCGCCTCGGGGAACGGCGACGCGGG CCTTCGCCGGTGGCCGCCGCCTCAGGGAACGGCGACGCGGG < 41bp 0.714095580123938 0.472940961830732 0.4156689 0.35325652 prediction 0.428191160247875 Functional Loss - SHROOM3 ENSG00000138771 CDS Human protein_coding chr4:77662864 chr4:77662867 nonsynonymous SNV 0.010 1 24 hm5C_associated_SNPs_86332 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:77662860-77662880
64251 chr11 6411942 6411942 1 + G C PAAD 6411941 + 6411921 6411961 41 TTGGATGGGCCTGGTGCTGGCGCTGGCGCTGGCGCTGGCGC TTGGATGGGCCTGGTGCTGGCCCTGGCGCTGGCGCTGGCGC < 41bp 0.71409542868029 0.409724878602685 0.29699415 0.14591879 prediction 0.428190857360581 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6411941 chr11:6411942 synonymous SNV . 0 22 hm5C_associated_SNPs_86333 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:6411921-6411953
64251 chr17 2936747 2936747 1 + G A rs573090041 2936744 + 2936724 2936764 41 AGCAGTTTGGGAGTGCCGTCCACGACCCTGACAGTCCCAGC AGCAGTTTGGGAGTGCCGTCCACAACCCTGACAGTCCCAGC < 41bp 0.714094257105307 0.474831843962054 0.19804713 0.08901194 prediction 0.428188514210614 Functional Loss - RAP1GAP2 ENSG00000132359 UTR3 Human protein_coding chr17:2936744 chr17:2936747 . . 0 24 hm5C_associated_SNPs_86334 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:2936736-2936792
64251 chr2 228399602 228399602 1 + C T SKCM 228399600 + 228399580 228399620 41 CTTTGGGACCACAGGTAAAGCTCCTGTTGGTTCTGTGGTTT CTTTGGGACCACAGGTAAAGCTTCTGTTGGTTCTGTGGTTT < 41bp 0.714088450902665 0.415684753521655 0.32206106 0.24358103 prediction 0.428176901805331 Functional Loss - AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228399600 chr2:228399602 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_86347 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:228399599-228399631
64251 chr9 139743961 139743961 1 + G A PAAD 139743958 + 139743938 139743978 41 TCTTCAAGTATGTGCTGATCCGAGTCCACTCGGCTCCCCGC TCTTCAAGTATGTGCTGATCCGAATCCACTCGGCTCCCCGC < 41bp 0.801240520527202 0.587155368196922 0.6802173 0.4165836 prediction 0.42817030466056 Functional Loss - PHPT1 ENSG00000054148 CDS Human protein_coding chr9:139743958 chr9:139743961 nonsynonymous SNV 0.807 2 24 hm5C_associated_SNPs_86352 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:139743860-139743980
64251 chrX 105970443 105970443 1 + G C LUAD 105970442 + 105970422 105970462 41 TAACGCCTGTAACCCGCACACGAATTTCACGGTGCCCACGG TAACGCCTGTAACCCGCACACCAATTTCACGGTGCCCACGG < 41bp 0.714075728320015 0.391278750683247 0.32802925 0.13920954 prediction 0.428151456640031 Functional Loss - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970442 chrX:105970443 synonymous SNV . 0 22 hm5C_associated_SNPs_86355 0 0 1 SND1 POSTAR2 ENCODE chrX:105970438-105970523
64251 chr9 115421782 115421782 1 + C T OV 115421780 + 115421760 115421800 41 GCATGTCGGGCGCGCGTTCTCGCAACATCGTCTACTTCTCC GCATGTCGGGCGCGCGTTCTCGTAACATCGTCTACTTCTCC < 41bp 0.848812809717958 0.634738306676241 0.41728628 0.8106651 prediction 0.428149006083435 Functional Loss - KIAA1958 ENSG00000165185 CDS Human protein_coding chr9:115421780 chr9:115421782 synonymous SNV . 0 23 hm5C_associated_SNPs_86356 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:115421781-115421807
64251 chr1 203017437 203017437 1 + G A SKCM 203017434 + 203017414 203017454 41 GGAGAAGAACCAGGAGCTGGCACGGGTGAGGGCACCAGGCC GGAGAAGAACCAGGAGCTGGCACAGGTGAGGGCACCAGGCC < 41bp 0.806766966869002 0.592699194976623 0.8190018 0.6346471 prediction 0.428135543784757 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203017434 chr1:203017437 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_86365 0 0 3 BUD13 POSTAR2 ENCODE chr1:203017367-203017481
64251 chr19 17631872 17631872 1 + G A HNSC 17631869 + 17631849 17631889 41 CGCCTCCTGACCGTGCCCTTCGAGAAGCATTCCACTTTGTA CGCCTCCTGACCGTGCCCTTCGAAAAGCATTCCACTTTGTA < 41bp 0.792870611932587 0.578812015658598 0.694136 0.29783845 prediction 0.428117192547978 Functional Loss - PGLS ENSG00000130313 CDS Human protein_coding chr19:17631869 chr19:17631872 synonymous SNV . 0 24 hm5C_associated_SNPs_86371 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17631857-17631888
64251 chr19 50385511 50385511 1 + G A SKCM 50385508 + 50385488 50385528 41 CTCGTCCCCAGCGCTTCCTCCAGGATCCCTACTCCACCACC CTCGTCCCCAGCGCTTCCTCCAGAATCCCTACTCCACCACC < 41bp 0.821431700037073 0.607374098924615 0.8327564 0.5915111 prediction 0.428115202224916 Functional Loss - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50385508 chr19:50385511 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_86372 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:50385506-50385538
64251 chr11 6415566 6415566 1 + G A rs113467489 6415563 + 6415543 6415583 41 CTGGCAGCTTCTCTACAGGGCTCGAGAAACCTATGGGCTGC CTGGCAGCTTCTCTACAGGGCTCAAGAAACCTATGGGCTGC < 41bp 0.784523360017373 0.570466125132088 0.14128804 0.054694593 prediction 0.428114469770569 Functional Loss - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415563 chr11:6415566 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_86373 1 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:6415532-6415600
64251 chr1 153633803 153633803 1 + A C rs16835489 153633802 + 153633782 153633822 41 TGAGCCTATGGACTCAGTAGCACAAGTACTGTTCCCCAGCT TGAGCCTATGGACTCAGTAGCCCAAGTACTGTTCCCCAGCT < 41bp 0.817979994996798 0.603926864515239 0.3340795 0.24465936 prediction 0.428106260963117 Functional Loss - SNAPIN ENSG00000143553 UTR3 Human protein_coding chr1:153633802 chr1:153633803 . . 0 22 hm5C_associated_SNPs_86375 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:153633775-153633804
64251 chr19 10395973 10395973 1 + G A rs2071440 10395970 + 10395950 10395990 41 CCACGCCTCCCTGAACCTATCCCGGGACAGGGCCTCTTCCT CCACGCCTCCCTGAACCTATCCCAGGACAGGGCCTCTTCCT < 41bp 0.768161907249736 0.554117534597826 0.8709027 0.22607556 prediction 0.42808874530382 Functional Loss - ICAM1 ENSG00000090339 UTR3 Human protein_coding chr19:10395970 chr19:10395973 . . 0 24 hm5C_associated_SNPs_86378 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:10395939-10396005
64251 chr19 38028332 38028332 1 + A T LUAD 38028328 + 38028308 38028348 41 ACTGGGGAGAAGCCTTATGGCTGCACTGACTGTGGGAAAGC ACTGGGGAGAAGCCTTATGGCTGCTCTGACTGTGGGAAAGC < 41bp 0.714043464762375 0.383295630236875 0.012427688 0.01704508 prediction 0.428086929524749 Functional Loss - ZNF793 ENSG00000188227 CDS Human protein_coding chr19:38028328 chr19:38028332 nonsynonymous SNV 0.993 0 25 hm5C_associated_SNPs_86379 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr19:38028324-38028345
64251 chr19 1912900 1912900 1 + A C rs146212621 1912896 + 1912876 1912916 41 GCGCAGGCGCCGTGCGTAAACTGGACGCAGACGAGGACGGC GCGCAGGCGCCGTGCGTAAACTGGCCGCAGACGAGGACGGC < 41bp 0.927207459262241 0.713164667232446 0.57006097 0.64051276 prediction 0.42808558405959 Functional Loss - ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912896 chr19:1912900 nonsynonymous SNV 0.306 0 25 hm5C_associated_SNPs_86381 1 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:1912884-1912966
64251 chr5 42801366 42801366 1 - G A SKCM 42801369 - 42801349 42801389 41 TGTGGATAAAACAGTTGAAACTCCATCGCCTCATTACCATC TGTGGATAAAACAGTTGAAACTCTATCGCCTCATTACCATC < 41bp 0.731515775068178 0.517483308276569 0.9695938 0.9493511 prediction 0.428064933583217 Functional Loss - SELENOP ENSG00000250722 CDS Human protein_coding chr5:42801369 chr5:42801366 unknown 0.001 0 24 hm5C_associated_SNPs_86386 0 0 4 IGF2BP1 POSTAR2 ENCODE chr5:42801350-42801382
64251 chr16 28906274 28906274 1 + G A STAD 28906271 + 28906251 28906291 41 GAGAGAGCCAACGCCTGCAACTCGGTGAGCCTGCGGAGCCC GAGAGAGCCAACGCCTGCAACTCAGTGAGCCTGCGGAGCCC < 41bp 0.821848315854414 0.607816450291466 0.5011282 0.20192969 prediction 0.428063731125895 Functional Loss - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28906271 chr16:28906274 synonymous SNV . 0 24 hm5C_associated_SNPs_86387 0 0 1 PRPF8 POSTAR2 ENCODE chr16:28906272-28906311
64251 chr7 132959852 132959852 1 + G T UCEC 132959850 + 132959830 132959870 41 ATTGATTGTACAGCACTACACAGAATTGACGACAGCCATTC ATTGATTGTACAGCACTACACATAATTGACGACAGCCATTC < 41bp 0.714029145152466 0.456949414467999 0.112603635 0.10115981 prediction 0.428058290304932 Functional Loss - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:132959850 chr7:132959852 stopgain 0.996 1 23 hm5C_associated_SNPs_86389 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:132959820-132959860
64251 chrX 102611483 102611483 1 + G A rs748477071 102611480 + 102611460 102611500 41 ACCAGCTTCCTTCAGCAGCGCAGGCGGTGGTCCCTGAGGCC ACCAGCTTCCTTCAGCAGCGCAGACGGTGGTCCCTGAGGCC < 41bp 0.714027971151078 0.469096584883146 0.5774219 0.3089857 prediction 0.428055942302156 Functional Loss - TCEAL9 ENSG00000185222 UTR5 Human protein_coding chrX:102611480 chrX:102611483 . . 0 24 hm5C_associated_SNPs_86390 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:102611460-102611498
64251 chr5 7895863 7895863 1 + G A UCEC 7895860 + 7895840 7895880 41 ATTTCAGATATCCATCTCTCCTCGAACAACAAATTCTTTCC ATTTCAGATATCCATCTCTCCTCAAACAACAAATTCTTTCC < 41bp 0.742158547351853 0.528134200430697 0.87673163 0.13856661 prediction 0.42804869384231 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7895860 chr5:7895863 nonsynonymous SNV 0.340 3 24 hm5C_associated_SNPs_86396 0 0 10 NOP58 POSTAR2 GSE43666,GSM1067861 chr5:7895846-7895873
64251 chr5 6633926 6633926 1 + C T BLCA 6633924 + 6633904 6633944 41 CCAGCGAGTCCGCCCCGCGTCTCCGCAGCGCGCCCAACTGC CCAGCGAGTCCGCCCCGCGTCTTCGCAGCGCGCCCAACTGC < 41bp 0.79350730586478 0.579484070828339 0.12909538 0.095397174 prediction 0.428046470072883 Functional Loss - SRD5A1 ENSG00000145545 CDS Human protein_coding chr5:6633924 chr5:6633926 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_86397 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:6633900-6633945
64251 chr4 69978307 69978307 1 + C T UCEC 69978305 + 69978285 69978325 41 AACACCTTCGGGTTGCAGCCCACGACCTCACCTGGTTCCAG AACACCTTCGGGTTGCAGCCCATGACCTCACCTGGTTCCAG < 41bp 0.841710507106384 0.627692004942774 0.023151934 0.118035406 prediction 0.428037004327219 Functional Loss - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69978305 chr4:69978307 synonymous SNV . 0 23 hm5C_associated_SNPs_86403 0 0 2 SND1 POSTAR2 ENCODE chr4:69978262-69978312
64251 chr6 26045770 26045770 1 + G A PRAD 26045767 + 26045747 26045787 41 AAGAAACCTCATCGCTACCGCCCGGGCACCGTGGCCTTGCG AAGAAACCTCATCGCTACCGCCCAGGCACCGTGGCCTTGCG < 41bp 0.792543811783179 0.578527547307318 0.24449039 0.08359721 prediction 0.428032528951722 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045767 chr6:26045770 synonymous SNV . 0 24 hm5C_associated_SNPs_86404 0 0 5 DDX3X POSTAR2 ENCODE chr6:26045749-26045789
64251 chr19 45567345 45567345 1 + G A UCEC 45567342 + 45567322 45567362 41 CCGGGCCGCGAGGAGAAGATCACGTTCATCACCAGTTTTGG CCGGGCCGCGAGGAGAAGATCACATTCATCACCAGTTTTGG < 41bp 0.714005405933631 0.46723932305015 0.8087517 0.4794919 prediction 0.428010811867261 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567342 chr19:45567345 synonymous SNV . 0 24 hm5C_associated_SNPs_86408 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:45567340-45567360
64251 chr19 45567344 45567344 1 + C T UCEC 45567342 + 45567322 45567362 41 CCGGGCCGCGAGGAGAAGATCACGTTCATCACCAGTTTTGG CCGGGCCGCGAGGAGAAGATCATGTTCATCACCAGTTTTGG < 41bp 0.714005405933631 0.461297640193036 0.8087517 0.71826786 prediction 0.428010811867261 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567342 chr19:45567344 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_86409 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:45567340-45567360
64251 chr2 176972312 176972312 1 + G C rs577549025 176972308 + 176972288 176972328 41 GAGCGCGCCAAGTGGCCGTACCGCGGCGGCGGCGGCGGCGG GAGCGCGCCAAGTGGCCGTACCGCCGCGGCGGCGGCGGCGG < 41bp 0.844868463872793 0.63086446669611 0.7605888 0.37216765 prediction 0.428007994353367 Functional Loss - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176972308 chr2:176972312 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_86410 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:176972299-176972317
64251 chr5 131607054 131607054 1 + G C BLCA 131607053 + 131607033 131607073 41 TGCAGAGTCGACCTGGGCTCCGAGGTGTACAGGATGCTGCG TGCAGAGTCGACCTGGGCTCCCAGGTGTACAGGATGCTGCG < 41bp 0.888287864052337 0.67428920045689 0.9095 0.9114162 prediction 0.427997327190892 Functional Loss - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607053 chr5:131607054 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_86412 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr19 8539106 8539106 1 + G C TGCT 8539102 + 8539082 8539122 41 AAACATGGGTCGATTTGGATCTGGGATGAACATGGGCAGGA AAACATGGGTCGATTTGGATCTGGCATGAACATGGGCAGGA < 41bp 0.867851701729445 0.653859033810569 0.72144365 0.11123246 prediction 0.427985335837753 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8539102 chr19:8539106 synonymous SNV . 0 25 hm5C_associated_SNPs_86414 0 0 39 TARDBP POSTAR2 DRA001158,DRS012387 chr19:8539048-8539121
64251 chr1 55518056 55518056 1 + A C SKCM 55518052 + 55518032 55518072 41 TCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGC TCACCGACTTCGAGAATGTGCCCGCGGAGGACGGGACCCGC < 41bp 0.713992029809933 0.290232822484044 0.13740626 0.096101165 prediction 0.427984059619865 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518052 chr1:55518056 nonsynonymous SNV 0.712 2 25 hm5C_associated_SNPs_86415 0 0 6 DDX24 POSTAR2 ENCODE chr1:55518039-55518088
64251 chr1 55518054 55518054 1 + C T UCEC 55518052 + 55518032 55518072 41 TCACCGACTTCGAGAATGTGCCCGAGGAGGACGGGACCCGC TCACCGACTTCGAGAATGTGCCTGAGGAGGACGGGACCCGC < 41bp 0.713992029809933 0.429125251208421 0.13740626 0.10831985 prediction 0.427984059619865 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518052 chr1:55518054 synonymous SNV . 0 23 hm5C_associated_SNPs_86416 2 0 5 DDX24 POSTAR2 ENCODE chr1:55518039-55518088
64251 chr20 60703773 60703773 1 + G A rs117383784 60703770 + 60703750 60703790 41 GACAATCAGTGAGAAAGTGGCCCGGGTGCATTCCCGCCAGA GACAATCAGTGAGAAAGTGGCCCAGGTGCATTCCCGCCAGA < 41bp 0.713991407236512 0.475465420556395 0.85216784 0.2709623 prediction 0.427982814473025 Functional Loss - LSM14B ENSG00000149657 intronic Human protein_coding chr20:60703770 chr20:60703773 . . 0 24 hm5C_associated_SNPs_86417 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:60703744-60703777
64251 chr19 16243590 16243590 1 + A C rs3745314 16243586 + 16243566 16243606 41 TGAGCAAGGCAACCGATCGCCAGGACCAGGAAGCATCACCC TGAGCAAGGCAACCGATCGCCAGGCCCAGGAAGCATCACCC < 41bp 0.93113929363536 0.717152826815241 0.9006771 0.9143695 prediction 0.427972933640237 Functional Loss - RAB8A ENSG00000269243 ncRNA_exonic Human antisense chr19:16243586 chr19:16243590 . . 0 25 hm5C_associated_SNPs_86421 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:16243539-16243607
64251 chr1 35885164 35885164 1 + G A COAD 35885161 + 35885141 35885181 41 CCCATGTGGTACTCCACATTCCCGATAGACCCTGGAACCCT CCCATGTGGTACTCCACATTCCCAATAGACCCTGGAACCCT < 41bp 0.733341606143281 0.519362397734759 0.08582544 0.057950705 prediction 0.427958416817045 Functional Loss - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35885161 chr1:35885164 synonymous SNV . 0 24 hm5C_associated_SNPs_86425 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:35885127-35885165
64251 chr4 39471655 39471655 1 + C T STAD 39471653 + 39471633 39471673 41 TTCCAGTAAGGTTCGTGATCCTCGGGCCAATTTTGATCAGT TTCCAGTAAGGTTCGTGATCCTTGGGCCAATTTTGATCAGT < 41bp 0.713972582840331 0.419582303011733 0.39251515 0.13777906 prediction 0.427945165680662 Functional Loss - LIAS ENSG00000121897 CDS Human protein_coding chr4:39471653 chr4:39471655 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_86431 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr4:39471644-39471680
64251 chr20 333866 333866 1 + T C UCEC 333865 + 333845 333885 41 TCTCCCTAGATCAGCCTGTCCTCGGGGACCCTGCTTCTGCT TCTCCCTAGATCAGCCTGTCCCCGGGGACCCTGCTTCTGCT < 41bp 0.805630694623944 0.591659409176886 0.15561107 0.89109635 prediction 0.427942570894115 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:333865 chr20:333866 nonsynonymous SNV 0.014 0 22 hm5C_associated_SNPs_86432 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:333856-333896
64251 chr16 69974483 69974483 1 + G A rs562617576 69974480 + 69974460 69974500 41 GTCTAAGCTGCCTGGGTATCCACGGGACAAAAACAGCAAAC GTCTAAGCTGCCTGGGTATCCACAGGACAAAAACAGCAAAC < 41bp 0.766354023004641 0.55238398639978 0.4106803 0.23867145 prediction 0.427940073209723 Functional Loss - WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69974480 chr16:69974483 . . 0 24 hm5C_associated_SNPs_86433 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:69974464-69974487
64251 chr5 137523041 137523041 1 + G A OV 137523038 + 137523018 137523058 41 AACAGACTGCAGCCCTTATGCCCGGATCCTACGCTCACGGC AACAGACTGCAGCCCTTATGCCCAGATCCTACGCTCACGGC < 41bp 0.801075830082272 0.587107312737211 0.51660746 0.22649443 prediction 0.427937034690122 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137523038 chr5:137523041 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_86436 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:137523022-137523049
64251 chr22 50649090 50649090 1 + C T COAD 50649087 + 50649067 50649107 41 CCCGACCACGTGTGCAATGCCTCCGACAACACCGGCCGCTA CCCGACCACGTGTGCAATGCCTCTGACAACACCGGCCGCTA < 41bp 0.751195774231897 0.537228469472076 0.11604068 0.116464764 prediction 0.427934609519642 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649087 chr22:50649090 unknown . 0 24 hm5C_associated_SNPs_86437 0 0 3 BUD13 POSTAR2 ENCODE chr22:50649056-50649093
64251 chr10 120877149 120877149 1 + C T HNSC 120877147 + 120877127 120877167 41 CCTTAGTAAGGATTTTGATGCCCGAAAGGCCTACCTGGCTG CCTTAGTAAGGATTTTGATGCCTGAAAGGCCTACCTGGCTG < 41bp 0.713964809651214 0.436748069060977 0.080697745 0.12814534 prediction 0.427929619302428 Functional Loss - FAM45A ENSG00000119979 CDS Human protein_coding chr10:120877147 chr10:120877149 stopgain 0.948 1 23 hm5C_associated_SNPs_86440 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:120877140-120877179
64251 chr4 20490493 20490493 1 + C T rs117793863 20490490 + 20490470 20490510 41 GACTGCCACCTGGCCTGGCTCTCCGACTGGCTTCGCCAAAG GACTGCCACCTGGCCTGGCTCTCTGACTGGCTTCGCCAAAG < 41bp 0.713964552209912 0.496748133058782 0.27491146 0.075458944 prediction 0.427929104419824 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20490490 chr4:20490493 synonymous SNV . 0 24 hm5C_associated_SNPs_86441 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr4:20490453-20490496
64251 chr19 11546475 11546475 1 + C T rs45450094 11546473 + 11546453 11546493 41 TTTCTTTCTGCAGCAGGAACCGCGGCTGCTGGACAAGAGGG TTTCTTTCTGCAGCAGGAACCGTGGCTGCTGGACAAGAGGG < 41bp 0.756380432720631 0.542417892863346 0.7037121 0.38082346 prediction 0.427925079714569 Functional Loss - PRKCSH ENSG00000130175 UTR5 Human protein_coding chr19:11546473 chr19:11546475 . . 0 23 hm5C_associated_SNPs_86443 1 0 9 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:11546440-11546500
64251 chr16 23700890 23700890 1 + G A LUSC 23700887 + 23700867 23700907 41 CAGGTGCCAACATCACGCCGCGCGAAGGTGATGAGCTCGCC CAGGTGCCAACATCACGCCGCGCAAAGGTGATGAGCTCGCC < 41bp 0.713961678563215 0.469880937449951 0.23575178 0.14831138 prediction 0.42792335712643 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700887 chr16:23700890 nonsynonymous SNV 0.420 1 24 hm5C_associated_SNPs_86444 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:23700890-23700948
64251 chr16 640245 640245 1 + G A rs562914613 640242 + 640222 640262 41 TCTCTCACGCCGCGGCCTCACCCGGCGGTGCTTCGGCAGGC TCTCTCACGCCGCGGCCTCACCCAGCGGTGCTTCGGCAGGC < 41bp 0.713947871650983 0.486440523123532 0.57967633 0.32756907 prediction 0.427895743301965 Functional Loss - RAB40C ENSG00000197562 UTR5 Human protein_coding chr16:640242 chr16:640245 . . 0 24 hm5C_associated_SNPs_86450 0 0 9 CSTF2T POSTAR2 ENCODE chr16:640191-640262
64251 chr3 63967927 63967927 1 + C T UCEC 63967924 + 63967904 63967944 41 GGATGGCACACTACTGAAATCTGCGGTGGGGCCAACCTGTC GGATGGCACACTACTGAAATCTGTGGTGGGGCCAACCTGTC < 41bp 0.763121585264106 0.54917403417108 0.2241945 0.15865219 prediction 0.427895102186052 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63967924 chr3:63967927 nonsynonymous SNV 0.948 1 24 hm5C_associated_SNPs_86451 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:63967912-63967942
64251 chr5 56558503 56558503 1 + G T UCEC 56558501 + 56558481 56558521 41 AAGTTTGGACCGTGGAAGAACAGCACTTTCAAACCCACAAC AAGTTTGGACCGTGGAAGAACATCACTTTCAAACCCACAAC < 41bp 0.713945411701655 0.414974395583061 0.21557307 0.21027693 prediction 0.42789082340331 Functional Loss - GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56558501 chr5:56558503 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_86452 0 0 25 FMR1 POSTAR2 GSE39682,GSM977615 chr5:56558451-56558548
64251 chr18 76754360 76754360 1 + C T STAD 76754358 + 76754338 76754378 41 CTGGCCTACGACGACAAGAACGCGGAGACCCTGAGCAGCTA CTGGCCTACGACGACAAGAACGTGGAGACCCTGAGCAGCTA < 41bp 0.814788098577591 0.600848156598185 0.46619138 0.34283274 prediction 0.427879883958812 Functional Loss - SALL3 ENSG00000256463 CDS Human protein_coding chr18:76754358 chr18:76754360 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_86455 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:76754352-76754377
64251 chr19 3532511 3532511 1 + G A UCEC 3532508 + 3532488 3532528 41 TCGCCTGGTCCCCACATCAGCACGGGCTGCTGGCCTCGGGG TCGCCTGGTCCCCACATCAGCACAGGCTGCTGGCCTCGGGG < 41bp 0.818159962837686 0.604220788874565 0.7770002 0.3799026 prediction 0.427878347926242 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3532508 chr19:3532511 nonsynonymous SNV 0.313 4 24 hm5C_associated_SNPs_86457 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3532505-3532541
64251 chr17 37074986 37074986 1 + C T LUAD 37074983 + 37074963 37075003 41 ATGTACGGGACGGTGGAGCGCACCGGCGACACGGGGATGCT ATGTACGGGACGGTGGAGCGCACTGGCGACACGGGGATGCT < 41bp 0.724508802636561 0.510571258886703 0.59089005 0.6581565 prediction 0.427875087499715 Functional Loss - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37074983 chr17:37074986 synonymous SNV . 0 24 hm5C_associated_SNPs_86458 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:37074965-37074990
64251 chr14 69925138 69925138 1 + C T COAD 69925135 + 69925115 69925155 41 GGGAGTGGCCATGCTTTTCTCTGCCGGGACATTTCTTTATG GGGAGTGGCCATGCTTTTCTCTGTCGGGACATTTCTTTATG < 41bp 0.720459697517115 0.506526964004318 0.07761842 0.02419594 prediction 0.427865467025595 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69925135 chr14:69925138 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_86460 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:69925117-69925144
64251 chr11 1977607 1977607 1 + G T SARC 1977605 + 1977585 1977625 41 GAGAGGCAGCAGAGGCAGAGCAGCGACCCGCGGCGGGGCGG GAGAGGCAGCAGAGGCAGAGCATCGACCCGCGGCGGGGCGG < 41bp 0.905328448472461 0.691397510362332 0.27067387 0.20344523 prediction 0.427861876220257 Functional Loss - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1977605 chr11:1977607 nonsynonymous SNV 0.200 0 23 hm5C_associated_SNPs_86463 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:1977600-1977620
64251 chr5 52778769 52778769 1 + G T BLCA 52778767 + 52778747 52778787 41 CTGCCAGGTCCTGTACAAGACCGAACTGAGCAAGGAGGAGT CTGCCAGGTCCTGTACAAGACCTAACTGAGCAAGGAGGAGT < 41bp 0.713929603426295 0.379005469088635 0.17917159 0.20460308 prediction 0.42785920685259 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52778767 chr5:52778769 stopgain 0.998 1 23 hm5C_associated_SNPs_86465 0 0 1 U2AF1 POSTAR2 ENCODE chr5:52778698-52778776
64251 chr9 100227242 100227242 1 + G T LUAD 100227239 + 100227219 100227259 41 CTGTGAATGTTGGGCAGTTGCTGGCCGTAAATGCCGAGGAG CTGTGAATGTTGGGCAGTTGCTGTCCGTAAATGCCGAGGAG < 41bp 0.713924576573617 0.318256523812363 0.37891492 0.056978405 prediction 0.427849153147234 Functional Loss - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100227239 chr9:100227242 nonsynonymous SNV 0.803 4 24 hm5C_associated_SNPs_86467 0 0 1 PRPF8 POSTAR2 ENCODE chr9:100227238-100227326
64251 chr7 76111908 76111908 1 + G T OV 76111904 + 76111884 76111924 41 GTCGTCTGGGAGTGGCTGAGCGACGATGGCTCCTGGACTGC GTCGTCTGGGAGTGGCTGAGCGACTATGGCTCCTGGACTGC < 41bp 0.732542864351457 0.518627013227232 0.22836319 0.15388969 prediction 0.427831702248449 Functional Loss - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76111904 chr7:76111908 nonsynonymous SNV 0.129 4 25 hm5C_associated_SNPs_86471 0 0 1 SF3B1 POSTAR2 ENCODE chr7:76111896-76111926
64251 chr11 10786162 10786162 1 + C T UCEC 10786160 + 10786140 10786180 41 CACGATGAGCATTACTATAACGCCATTTCCGTTACCACGTC CACGATGAGCATTACTATAACGTCATTTCCGTTACCACGTC < 41bp 0.875620883948629 0.661706112395517 0.057950646 0.053379923 prediction 0.427829543106224 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10786160 chr11:10786162 nonsynonymous SNV 0.972 2 23 hm5C_associated_SNPs_86472 0 0 1 YBX3 POSTAR2 ENCODE chr11:10786158-10786203
64251 chr12 117287187 117287187 1 + G A LUSC 117287184 + 117287164 117287204 41 CGCACCTGCCCGCTCTGCCGCTCGGTCGCCGTGGACACCCT CGCACCTGCCCGCTCTGCCGCTCAGTCGCCGTGGACACCCT < 41bp 0.794765953763713 0.58085408631907 0.14846459 0.20043626 prediction 0.427823734889286 Functional Loss - RNFT2 ENSG00000135119 CDS Human protein_coding chr12:117287184 chr12:117287187 synonymous SNV . 0 24 hm5C_associated_SNPs_86475 0 0 1 SND1 POSTAR2 ENCODE chr12:117287121-117287203
64251 chr22 47189616 47189616 1 + C T rs146025212 47189614 + 47189594 47189634 41 AGCCAGCGGCAGGGGCGGCCCACGCTGCAGGAGGGGCCAGG AGCCAGCGGCAGGGGCGGCCCATGCTGCAGGAGGGGCCAGG < 41bp 0.713911708819174 0.470188892180895 0.17684087 0.24681354 prediction 0.427823417638349 Functional Loss - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47189614 chr22:47189616 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_86476 0 0 3 BUD13 POSTAR2 ENCODE chr22:47189548-47189624
64251 chr16 70502853 70502853 1 + C T STAD 70502850 + 70502830 70502870 41 TGCACCTACCTAGGCTTGGACTCCGGAGCCCGGCCTGTCCA TGCACCTACCTAGGCTTGGACTCTGGAGCCCGGCCTGTCCA < 41bp 0.739610018513191 0.525702227860455 0.75941944 0.43828824 prediction 0.427815581305472 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70502850 chr16:70502853 synonymous SNV . 0 24 hm5C_associated_SNPs_86478 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:70502831-70502854
64251 chr5 37727078 37727078 1 + G A BLCA 37727075 + 37727055 37727095 41 CAAGACCGATGACAGTAATCCTCGGGAAGCCATTTTGCGTC CAAGACCGATGACAGTAATCCTCAGGAAGCCATTTTGCGTC < 41bp 0.740805276527601 0.526898454476071 0.4722027 0.0652419 prediction 0.42781364410306 Functional Loss - WDR70 ENSG00000082068 CDS Human protein_coding chr5:37727075 chr5:37727078 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86479 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:37727057-37727083
64251 chr11 134244523 134244523 1 + A C STAD 134244519 + 134244499 134244539 41 TGGGAGAAGGGGGTTGTATTCATCAATGGCCAGAACCTTGG TGGGAGAAGGGGGTTGTATTCATCCATGGCCAGAACCTTGG < 41bp 0.713902877397538 0.294218389601138 0.40071863 0.8444886 prediction 0.427805754795076 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134244519 chr11:134244523 nonsynonymous SNV 0.984 5 25 hm5C_associated_SNPs_86482 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:134244512-134244536
64251 chr3 52836787 52836787 1 + G T UCEC 52836784 + 52836764 52836804 41 GGGAATTACATTGAGCGGCTCTGGGCCTACCTCACCATTGA GGGAATTACATTGAGCGGCTCTGTGCCTACCTCACCATTGA < 41bp 0.713898231438429 0.302547550586326 0.6969848 0.17506748 prediction 0.427796462876858 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836784 chr3:52836787 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86486 0 0 8 GRWD1 POSTAR2 ENCODE chr3:52836756-52836818
64251 chr17 41352418 41352418 1 + C T UCEC 41352415 + 41352395 41352435 41 GGGGGATTCTATGTACAGCTCTGCGCTCTCACAGCCAGGCC GGGGGATTCTATGTACAGCTCTGTGCTCTCACAGCCAGGCC < 41bp 0.74302918413302 0.529137349105038 0.13141009 0.14339224 prediction 0.427783670055963 Functional Loss - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41352415 chr17:41352418 nonsynonymous SNV 0.883 3 24 hm5C_associated_SNPs_86492 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41352399-41352428
64251 chr8 92092939 92092939 1 + C T UCEC 92092936 + 92092916 92092956 41 TGAAGATATTGTAAACACAGCTGCATGGGGAGGTCAGCTTG TGAAGATATTGTAAACACAGCTGTATGGGGAGGTCAGCTTG < 41bp 0.761831191721056 0.547944926256048 0.22552013 0.16025645 prediction 0.427772530930017 Functional Loss - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92092936 chr8:92092939 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_86495 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:92092921-92092948
64251 chr15 39882146 39882146 1 + C T UCEC 39882143 + 39882123 39882163 41 TACGCTGGCAATGGCATCATCTGCGGGGAGGACACAGACCT TACGCTGGCAATGGCATCATCTGTGGGGAGGACACAGACCT < 41bp 0.765962919777109 0.552076887201949 0.71326303 0.5527509 prediction 0.42777206515032 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39882143 chr15:39882146 synonymous SNV . 0 24 hm5C_associated_SNPs_86497 0 0 5 IGF2BP1 POSTAR2 ENCODE chr15:39882138-39882203
64251 chr12 20522884 20522884 1 + G T LUSC 20522881 + 20522861 20522901 41 ATCGCCTTGACTAGCGCGGTCAGGACCGTGTCCCTCATTTC ATCGCCTTGACTAGCGCGGTCAGTACCGTGTCCCTCATTTC < 41bp 0.713885771223238 0.32329076448626 0.51110405 0.08351228 prediction 0.427771542446477 Functional Loss - PDE3A ENSG00000172572 CDS Human protein_coding chr12:20522881 chr12:20522884 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_86498 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr12:20522865-20522886
64251 chr21 44438312 44438312 1 + C T LGG 44438309 + 44438289 44438329 41 AGTGGTCACACAGACATTGTCGCCTGGGACAATTAGGATCC AGTGGTCACACAGACATTGTCGCTTGGGACAATTAGGATCC < 41bp 0.770401170744098 0.556516816549832 0.48219 0.13811398 prediction 0.427768708388533 Functional Loss - PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44438309 chr21:44438312 nonsynonymous SNV 0.281 5 24 hm5C_associated_SNPs_86500 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr21:44438296-44438355
64251 chr1 150476871 150476871 1 + G A OV 150476868 + 150476848 150476888 41 ATCAGTGTGGGACAATTCAGCTTGACTTCCAACTGCCCCTG ATCAGTGTGGGACAATTCAGCTTAACTTCCAACTGCCCCTG < 41bp 0.804246279661795 0.590371712429714 0.025891662 0.010243952 prediction 0.42774913446416 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150476868 chr1:150476871 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86505 0 0 1 PPIG POSTAR2 ENCODE chr1:150476840-150476895
64251 chr13 100634890 100634890 1 + C T CESC 100634888 + 100634868 100634908 41 CCCGGCGAGGTGTTCGGGCGCTCGGAGCAATACCGCCAGGT CCCGGCGAGGTGTTCGGGCGCTTGGAGCAATACCGCCAGGT < 41bp 0.804304519498974 0.590430576992527 0.8120438 0.84097385 prediction 0.427747885012895 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634888 chr13:100634890 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_86506 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:100634860-100634900
64251 chr16 1544399 1544399 1 + C T LUSC 1544397 + 1544377 1544417 41 TGGAGTCCCTGAAGCGGTATCTCGGTGAGATGGAGCCTCCA TGGAGTCCCTGAAGCGGTATCTTGGTGAGATGGAGCCTCCA < 41bp 0.810671850056666 0.59680125911556 0.90069157 0.89242935 prediction 0.427741181882212 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1544397 chr16:1544399 synonymous SNV . 0 23 hm5C_associated_SNPs_86508 0 0 2 PPIG POSTAR2 ENCODE chr16:1544379-1544409
64251 chr2 97007517 97007517 1 + G A HNSC 97007514 + 97007494 97007534 41 ATATTCCTGGCACCCCAGTCCTCGAAGACTTTCCTCAGAAT ATATTCCTGGCACCCCAGTCCTCAAAGACTTTCCTCAGAAT < 41bp 0.810677468275229 0.596807101941406 0.3656156 0.07313526 prediction 0.427740732667647 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007514 chr2:97007517 nonsynonymous SNV 0.987 0 24 hm5C_associated_SNPs_86510 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:97007483-97007520
64251 chr16 88780076 88780076 1 + G A UCEC 88780073 + 88780053 88780093 41 AGGGCTTCTCGGATGAGCGGCACGGGGACGTGGTGGTGGTG AGGGCTTCTCGGATGAGCGGCACAGGGACGTGGTGGTGGTG < 41bp 0.713868580327966 0.461033630336465 0.86561763 0.86236644 prediction 0.427737160655931 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780073 chr16:88780076 nonsynonymous SNV 0.750 4 24 hm5C_associated_SNPs_86513 0 0 2 DDX24 POSTAR2 ENCODE chr16:88780050-88780083
64251 chr16 31214757 31214757 1 + A C rs191130847 31214756 + 31214736 31214776 41 GCCTCCAGGAGATTAAAGACCATGAACTTGAAGCCATACAG GCCTCCAGGAGATTAAAGACCCTGAACTTGAAGCCATACAG < 41bp 0.747707124814666 0.533838662413759 0.09079018 0.044728518 prediction 0.427736924801813 Functional Loss - PYCARD-AS1 ENSG00000103490;ENSG00000261359 UTR5;UTR3 Human other chr16:31214756 chr16:31214757 . . 0 22 hm5C_associated_SNPs_86514 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:31214720-31214760
64251 chr17 40117284 40117284 1 + T C rs184299114 40117283 + 40117263 40117303 41 GAGAAACAGGCAGGAAGCTACTAGAAGCTGGCAGAAGAGAG GAGAAACAGGCAGGAAGCTACCAGAAGCTGGCAGAAGAGAG < 41bp 0.713866740156927 0.492857682766797 0.8822281 0.7109914 prediction 0.427733480313853 Functional Loss - TTC25 ENSG00000204815 ncRNA_exonic Human protein_coding chr17:40117283 chr17:40117284 . 0.000 0 22 hm5C_associated_SNPs_86516 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:40117268-40117289
64251 chr12 12006442 12006442 1 + G A SKCM 12006439 + 12006419 12006459 41 TTTTTCACCATTCTTCCACCCTGGAAACTCTATACACACAC TTTTTCACCATTCTTCCACCCTGAAAACTCTATACACACAC < 41bp 0.757049196980351 0.543189325928748 0.024031252 0.023578554 prediction 0.427719742103206 Functional Loss - ETV6 ENSG00000139083 CDS Human protein_coding chr12:12006439 chr12:12006442 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_86524 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:12006442-12006475
64251 chr4 39482439 39482439 1 + C T UCEC 39482437 + 39482417 39482457 41 TTGAAGATACGGGACGTGAGCTCGGGAAAGTGTCTGAAAAC TTGAAGATACGGGACGTGAGCTTGGGAAAGTGTCTGAAAAC < 41bp 0.8129321029572 0.599077187731187 0.12500954 0.11087754 prediction 0.427709830452027 Functional Loss - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482437 chr4:39482439 . . 0 23 hm5C_associated_SNPs_86529 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr4:39482420-39482440
64251 chr19 11560122 11560122 1 + C T LUSC 11560119 + 11560099 11560139 41 AAAGAGACCATGGTGACCAGCACCACAGAGCCCAGTCGCTG AAAGAGACCATGGTGACCAGCACTACAGAGCCCAGTCGCTG < 41bp 0.742531113907705 0.528680285380786 0.041637868 0.07184735 prediction 0.427701657053839 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11560119 chr19:11560122 synonymous SNV . 0 24 hm5C_associated_SNPs_86533 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11560106-11560134
64251 chr12 32135856 32135856 1 + C T HNSC 32135854 + 32135834 32135874 41 TTTTGCAGTGGACAAGAATCCTCAACAAAAGGAATGCCTGC TTTTGCAGTGGACAAGAATCCTTAACAAAAGGAATGCCTGC < 41bp 0.713850589833766 0.443831218157207 0.091667 0.066807956 prediction 0.427701179667532 Functional Loss - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32135854 chr12:32135856 nonsynonymous SNV 0.033 1 23 hm5C_associated_SNPs_86535 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr12:32135839-32135864
64251 chr12 6646882 6646882 1 + G C BRCA 6646878 + 6646858 6646898 41 GGCGCTGCCAAGGCTGTGGGCAAGGTCATCCCTGAGCTGAA GGCGCTGCCAAGGCTGTGGGCAAGCTCATCCCTGAGCTGAA < 41bp 0.71384772304635 0.421029732488192 0.70350873 0.41417393 prediction 0.4276954460927 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6646878 chr12:6646882 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_86543 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6646782-6646998
64251 chr20 61457179 61457179 1 + G A UCEC 61457176 + 61457156 61457196 41 CCCTCTGTTTCAGGGTGACCCTGGCCCCCCTGGGCCCGCCG CCCTCTGTTTCAGGGTGACCCTGACCCCCCTGGGCCCGCCG < 41bp 0.713847627207972 0.462063250383395 0.90639806 0.6063272 prediction 0.427695254415944 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61457176 chr20:61457179 nonsynonymous SNV 0.039 4 24 hm5C_associated_SNPs_86544 0 0 7 BUD13 POSTAR2 ENCODE chr20:61457169-61457220
64251 chr17 40441470 40441470 1 + C T UCEC 40441468 + 40441448 40441488 41 GCCCAGCAGCTGCAGGGAGACGCGCTGCGCCAGATGCAGGT GCCCAGCAGCTGCAGGGAGACGTGCTGCGCCAGATGCAGGT < 41bp 0.713847106095257 0.451852102910658 0.52331764 0.33706868 prediction 0.427694212190515 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40441468 chr17:40441470 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_86545 0 0 4 BUD13 POSTAR2 ENCODE chr17:40441437-40441473
64251 chr19 54697079 54697079 1 + C T rs7595 54697077 + 54697057 54697097 41 ATATCGCTCAGTGCTGGGCCCCCGAGGACACCATCCCACTC ATATCGCTCAGTGCTGGGCCCCTGAGGACACCATCCCACTC < 41bp 0.840684403430564 0.626838905097303 0.57683897 0.36400408 prediction 0.427690996666523 Functional Loss - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54697077 chr19:54697079 synonymous SNV . 0 23 hm5C_associated_SNPs_86547 2 1 6 LIN28A POSTAR2 GSE39873,GSM980594 chr19:54697068-54697089
64251 chr9 91974157 91974157 1 + G A rs532746168 91974154 + 91974134 91974174 41 GCCATGGAGGGCCATTCCTGCCCGGCAACAGCACCGTCCTG GCCATGGAGGGCCATTCCTGCCCAGCAACAGCACCGTCCTG < 41bp 0.784459458570863 0.570615971729044 0.34758776 0.10618433 prediction 0.427686973683637 Functional Loss - SECISBP2 ENSG00000187742 UTR3 Human protein_coding chr9:91974154 chr9:91974157 . . 0 24 hm5C_associated_SNPs_86551 0 0 5 DDX6 POSTAR2 ENCODE chr9:91974112-91974187
64251 chr19 41246378 41246378 1 + G A rs2290692 41246375 + 41246355 41246395 41 TCAGGAGGGCCCCATCCAATCCCGGGCCCCTGCAGGGAAAA TCAGGAGGGCCCCATCCAATCCCAGGCCCCTGCAGGGAAAA < 41bp 0.747046263079968 0.533203350939052 0.749338 0.31507987 prediction 0.427685824281832 Functional Loss - ITPKC ENSG00000086544 UTR3 Human protein_coding chr19:41246375 chr19:41246378 . . 0 24 hm5C_associated_SNPs_86552 0 0 1 UPF1 POSTAR2 ENCODE chr19:41246369-41246417
64251 chr3 10865006 10865006 1 + G T READ 10865004 + 10864984 10865024 41 TAGAGAATTGTGTGGAGTTCCAGAAACTGAATGTGAGCAAC TAGAGAATTGTGTGGAGTTCCATAAACTGAATGTGAGCAAC < 41bp 0.713839122398154 0.379565506532302 0.70344603 0.38695553 prediction 0.427678244796308 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10865004 chr3:10865006 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_86555 0 0 1 U2AF2 POSTAR2 ENCODE chr3:10864970-10865020
64251 chr17 48559496 48559496 1 + G A rs34067532 48559493 + 48559473 48559513 41 CGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCG CGGCTGTTGGGACGGACGCACTCAGCCTGCGATGCTCTGCG < 41bp 0.817466600947848 0.603633282550835 0.39967924 0.1971353 prediction 0.427666636794026 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48559493 chr17:48559496 synonymous SNV . 0 24 hm5C_associated_SNPs_86559 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48559465-48559500
64251 chr14 39649802 39649802 1 + G A rs149115374 39649799 + 39649779 39649819 41 CAATGAAGGAAAAAGAGCATCAGGTGGTGCGTAATGAAGAA CAATGAAGGAAAAAGAGCATCAGATGGTGCGTAATGAAGAA < 41bp 0.739382550465264 0.525551316806349 0.57065463 0.38517115 prediction 0.427662467317829 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39649799 chr14:39649802 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_86561 0 0 29 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39649751-39649939
64251 chr12 66704321 66704321 1 + C T rs148111807 66704318 + 66704298 66704338 41 GGCTATAGAAGTTTTGCTCACAGCACCTACAGGGAAAGCAG GGCTATAGAAGTTTTGCTCACAGTACCTACAGGGAAAGCAG < 41bp 0.74336249877238 0.52954318546242 0.36091873 0.37407306 prediction 0.42763862661992 Functional Loss - HELB ENSG00000127311 CDS Human protein_coding chr12:66704318 chr12:66704321 nonsynonymous SNV 0.076 4 24 hm5C_associated_SNPs_86565 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:66704295-66704321
64251 chr19 48968005 48968005 1 + C T STAD 48968003 + 48967983 48968023 41 TGCTAGCCCCCGAGTTCTCACACCAACCCTGGCGCTGACCC TGCTAGCCCCCGAGTTCTCACATCAACCCTGGCGCTGACCC < 41bp 0.713811942879093 0.426614646748675 0.83576787 0.88262177 prediction 0.427623885758186 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48968003 chr19:48968005 nonsynonymous SNV 0.981 2 23 hm5C_associated_SNPs_86567 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:48967986-48968021
64251 chr10 94352997 94352997 1 + G C rs552381017 94352993 + 94352973 94353013 41 TAGAGAGCGGGGACGCCGACCTGCGTGCGTCGGTCCTCCAG TAGAGAGCGGGGACGCCGACCTGCCTGCGTCGGTCCTCCAG < 41bp 0.829585886027225 0.615775541430433 0.2711045 0.11288464 prediction 0.427620689193583 Functional Loss - KIF11 ENSG00000138160 upstream Human protein_coding chr10:94352993 chr10:94352997 . . 0 25 hm5C_associated_SNPs_86568 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr10:94352960-94353000
64251 chr16 31089320 31089320 1 + G A COAD 31089317 + 31089297 31089337 41 ATCAGGACCATGTGTGCAAACATGAAGAAGAGGCCACGGAC ATCAGGACCATGTGTGCAAACATAAAGAAGAGGCCACGGAC < 41bp 0.713806239190992 0.471067656481423 0.0531725 0.035721302 prediction 0.427612478381983 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089317 chr16:31089320 nonsynonymous SNV 0.920 0 24 hm5C_associated_SNPs_86572 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:31089296-31089320
64251 chr15 41770794 41770794 1 + C T OV 41770791 + 41770771 41770811 41 AACAGATGGATCCCTTTACTCGGCGGCAGTGCAAGCCTACC AACAGATGGATCCCTTTACTCGGTGGCAGTGCAAGCCTACC < 41bp 0.720550900681248 0.506746235875401 0.92992073 0.87962675 prediction 0.427609329611693 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41770791 chr15:41770794 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_86575 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr15:41770775-41770796
64251 chr10 31607763 31607763 1 - C T UCEC 31607766 - 31607746 31607786 41 GGCCACACCCGCCGCGGCTGCCCGGGGCAGGGAGGGATCTG GGCCACACCCGCCGCGGCTGCCCAGGGCAGGGAGGGATCTG < 41bp 0.713801845706538 0.479429551516424 0.89769953 0.40814322 prediction 0.427603691413075 Functional Loss - ZEB1-AS1 ENSG00000237036 ncRNA_exonic Human antisense chr10:31607766 chr10:31607763 . . 0 24 hm5C_associated_SNPs_86577 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:31607762-31607763
64251 chr1 32636340 32636340 1 + G A SKCM 32636337 + 32636317 32636357 41 AAATTGAGTTTCTCCAGAGCCACGAGAACCAGGAGATCTAC AAATTGAGTTTCTCCAGAGCCACAAGAACCAGGAGATCTAC < 41bp 0.74933939332457 0.535544776918828 0.5275533 0.4075371 prediction 0.427589232811484 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32636337 chr1:32636340 nonsynonymous SNV 0.984 1 24 hm5C_associated_SNPs_86581 0 0 12 RTCB POSTAR2 GSE38201,GSM936508 chr1:32636314-32636343
64251 chr9 131851262 131851262 1 + C T CESC 131851260 + 131851240 131851280 41 TGTTTTGCAGGAACAGACAACGCAAGCTGGGGACGAAACTG TGTTTTGCAGGAACAGACAACGTAAGCTGGGGACGAAACTG < 41bp 0.713794302039156 0.453293827386961 0.1931831 0.2184611 prediction 0.427588604078311 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131851260 chr9:131851262 synonymous SNV . 0 23 hm5C_associated_SNPs_86582 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr9:131851262-131851263
64251 chr9 130575853 130575853 1 + G A LUSC 130575850 + 130575830 130575870 41 CTGCACCTGGTGGGTGGTGTCCTGAAGCTGCTGGAGCCCGC CTGCACCTGGTGGGTGGTGTCCTAAAGCTGCTGGAGCCCGC < 41bp 0.785110881168248 0.571316802283189 0.3665661 0.2271815 prediction 0.427588157770118 Functional Loss - FPGS ENSG00000136877 CDS Human protein_coding chr9:130575850 chr9:130575853 synonymous SNV . 0 24 hm5C_associated_SNPs_86583 0 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr9:130575818-130575865
64251 chr2 61304214 61304214 1 + C T OV 61304211 + 61304191 61304231 41 GTGGACATTTCAGTTCATTGCGACGTTCACATTTTCAACTG GTGGACATTTCAGTTCATTGCGATGTTCACATTTTCAACTG < 41bp 0.714350612283226 0.500561220602169 0.61421335 0.31096786 prediction 0.427578783362115 Functional Loss - KIAA1841 ENSG00000162929 CDS Human protein_coding chr2:61304211 chr2:61304214 synonymous SNV . 0 24 hm5C_associated_SNPs_86586 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:61304203-61304231
64251 chr11 86519436 86519436 1 + G A SKCM 86519433 + 86519413 86519453 41 TGGATTATGATTATGCCCTCCTGGAACTCAAAAAGCCCCAC TGGATTATGATTATGCCCTCCTGAAACTCAAAAAGCCCCAC < 41bp 0.713788246367255 0.486851368755027 0.10197842 0.109826654 prediction 0.42757649273451 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86519433 chr11:86519436 nonsynonymous SNV 0.982 5 24 hm5C_associated_SNPs_86590 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:86519415-86519455
64251 chr16 1823715 1823715 1 + A C COAD 1823711 + 1823691 1823731 41 CTCCCCCGGTCCCAGCCATCCTGGAAGACGCCGGTGCCGAC CTCCCCCGGTCCCAGCCATCCTGGCAGACGCCGGTGCCGAC < 41bp 0.933613698224518 0.719833755951748 0.5605933 0.43619516 prediction 0.427559884545539 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1823711 chr16:1823715 nonsynonymous SNV 0.785 3 25 hm5C_associated_SNPs_86601 0 0 1 PPIG POSTAR2 ENCODE chr16:1823709-1823762
64251 chr22 20761251 20761251 1 + G A STAD 20761248 + 20761228 20761268 41 TTTCTCCCTGGGGAGCAAACCTCGAAACTAACATGATGTGC TTTCTCCCTGGGGAGCAAACCTCAAAACTAACATGATGTGC < 41bp 0.796326043968244 0.582546970999706 0.9106194 0.34051734 prediction 0.427558145937075 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20761248 chr22:20761251 nonsynonymous SNV 0.029 0 24 hm5C_associated_SNPs_86602 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr22:20761240-20761260
64251 chr12 122481904 122481904 1 + C T rs76573037 122481901 + 122481881 122481921 41 TCGGCTGTGCCCAGCGACGGCACCGAGGCCAAGGTGGATGA TCGGCTGTGCCCAGCGACGGCACTGAGGCCAAGGTGGATGA < 41bp 0.756710716246646 0.542933825404838 0.20876572 0.13265386 prediction 0.427553781683617 Functional Loss - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122481901 chr12:122481904 synonymous SNV . 0 24 hm5C_associated_SNPs_86603 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:122481900-122481920
64251 chr16 89704484 89704484 1 + G A ESCA 89704481 + 89704461 89704501 41 CCAGCAACCTCACACAGGCTCCCGAGGAGGAGCCCATCCCG CCAGCAACCTCACACAGGCTCCCAAGGAGGAGCCCATCCCG < 41bp 0.815856280761672 0.602082392305385 0.15325466 0.03505692 prediction 0.427547776912574 Functional Loss - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89704481 chr16:89704484 nonsynonymous SNV 0.132 0 24 hm5C_associated_SNPs_86607 0 0 2 LARP4 POSTAR2 ENCODE chr16:89704461-89704498
64251 chr3 183906042 183906042 1 + T C UCEC 183906041 + 183906021 183906061 41 AGATGCTGGCCACCCGGAGTCTGCGGGTTCCAGCCCACATT AGATGCTGGCCACCCGGAGTCCGCGGGTTCCAGCCCACATT < 41bp 0.827955107519211 0.614181762184377 0.29403836 0.7228905 prediction 0.427546690669669 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906041 chr3:183906042 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_86608 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:183906037-183906058
64251 chr12 110574623 110574623 1 + C T SARC 110574620 + 110574600 110574640 41 GATTGCAAAGAGTACAAAACCAGCTGAAAAGCATGCGCCAA GATTGCAAAGAGTACAAAACCAGTTGAAAAGCATGCGCCAA < 41bp 0.72220432304513 0.508437935645299 0.9160356 0.90897226 prediction 0.427532774799662 Functional Loss - IFT81 ENSG00000122970 CDS Human protein_coding chr12:110574620 chr12:110574623 synonymous SNV . 0 24 hm5C_associated_SNPs_86615 0 0 1 UCHL5 POSTAR2 ENCODE chr12:110574586-110574670
64251 chr14 56755316 56755316 1 + C T UCEC 56755313 + 56755293 56755333 41 CCTTACACAGCACGGATATTCGCCGCCGGATTTGACTCTTC CCTTACACAGCACGGATATTCGCTGCCGGATTTGACTCTTC < 41bp 0.746433923544691 0.532669667186495 0.26207584 0.20308766 prediction 0.427528512716391 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56755313 chr14:56755316 synonymous SNV . 0 24 hm5C_associated_SNPs_86616 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:56755296-56755326
64251 chr20 9319618 9319618 1 + C T LGG 9319615 + 9319595 9319635 41 GAAGGGCGGATAGTTTGTGTCTGCAGTGGCACAGATCTAGT GAAGGGCGGATAGTTTGTGTCTGTAGTGGCACAGATCTAGT < 41bp 0.738945057437332 0.525188312627167 0.80874586 0.16034162 prediction 0.42751348962033 Functional Loss - PLCB4 ENSG00000101333 CDS Human protein_coding chr20:9319615 chr20:9319618 synonymous SNV . 0 24 hm5C_associated_SNPs_86620 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:9319596-9319618
64251 chr6 157802916 157802916 1 + G C rs529370775 157802912 + 157802892 157802932 41 GGTGTCCTCGGCAAAGTTGTCGCCGAGCCGGGAGCCCGTGT GGTGTCCTCGGCAAAGTTGTCGCCCAGCCGGGAGCCCGTGT < 41bp 0.787382801478034 0.573626984341996 0.4597083 0.16649646 prediction 0.427511634272076 Functional Loss - ZDHHC14 ENSG00000175048 UTR5 Human protein_coding chr6:157802912 chr6:157802916 . . 0 25 hm5C_associated_SNPs_86621 0 0 4 CSTF2T POSTAR2 ENCODE chr6:157802906-157803025
64251 chr4 4861950 4861950 1 + G A rs574606351 4861947 + 4861927 4861967 41 GGGTCGCTGGGAGCCCCGGACGCGCCCTCTTCGCCGCGGCC GGGTCGCTGGGAGCCCCGGACGCACCCTCTTCGCCGCGGCC < 41bp 0.713754221871467 0.457831576509336 0.31107688 0.13428676 prediction 0.427508443742935 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4861947 chr4:4861950 synonymous SNV . 0 24 hm5C_associated_SNPs_86622 0 0 1 RPS3 POSTAR2 ENCODE chr4:4861929-4861971
64251 chr3 152880938 152880938 1 + G A BLCA 152880935 + 152880915 152880955 41 ACGTCGGCCAAAAACAAAGCCTCGGTAGACGAGCTATTTGC ACGTCGGCCAAAAACAAAGCCTCAGTAGACGAGCTATTTGC < 41bp 0.713753084206004 0.486388811546289 0.025750607 0.009986401 prediction 0.427506168412009 Functional Loss - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880935 chr3:152880938 synonymous SNV . 0 24 hm5C_associated_SNPs_86625 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:152880900-152880940
64251 chr17 2923826 2923826 1 + G T CESC 2923822 + 2923802 2923842 41 AGTCACGGAGTCCCATCAAGCGACGCTCGGGGCTCTTCCCC AGTCACGGAGTCCCATCAAGCGACTCTCGGGGCTCTTCCCC < 41bp 0.713748098225162 0.498946156834249 0.9119235 0.70248985 prediction 0.427496196450325 Functional Loss - RAP1GAP2 ENSG00000132359 CDS Human protein_coding chr17:2923822 chr17:2923826 nonsynonymous SNV 0.983 4 25 hm5C_associated_SNPs_86629 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:2923823-2923844
64251 chr17 7480240 7480240 1 + G A rs147550900 7480237 + 7480217 7480257 41 GTCTGCCTGGCGGGAAGGTCCTGGGCAAAGGATCAGTCTTT GTCTGCCTGGCGGGAAGGTCCTGAGCAAAGGATCAGTCTTT < 41bp 0.713747445782451 0.471374716009453 0.8500266 0.48884407 prediction 0.427494891564902 Functional Loss - SNORD10 ENSG00000238917 ncRNA_exonic Human snoRNA chr17:7480237 chr17:7480240 . . 0 24 hm5C_associated_SNPs_86630 0 0 106 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:7480222-7480246
64251 chr16 67235956 67235956 1 + G A LUAD 67235953 + 67235933 67235973 41 GGACAACATGTTGTACTTCTCCAGAAACGCGCCCAGCGCGT GGACAACATGTTGTACTTCTCCAAAAACGCGCCCAGCGCGT < 41bp 0.814793095203007 0.601046853391668 0.3219239 0.035903335 prediction 0.427492483622679 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67235953 chr16:67235956 nonsynonymous SNV 0.957 0 24 hm5C_associated_SNPs_86631 0 0 1 PPIG POSTAR2 ENCODE chr16:67235956-67235973
64251 chr11 75495789 75495789 1 + T C UCEC 75495788 + 75495768 75495808 41 GGGTCCTGTCCTTCCTTGTACTGGGTAAGCTGGGCCTTAGA GGGTCCTGTCCTTCCTTGTACCGGGTAAGCTGGGCCTTAGA < 41bp 0.713745190685065 0.47691510390793 0.8738711 0.90310013 prediction 0.427490381370129 Functional Loss - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75495788 chr11:75495789 nonsynonymous SNV 0.871 2 22 hm5C_associated_SNPs_86633 0 0 3 BUD13 POSTAR2 ENCODE chr11:75495773-75495880
64251 chr1 60314051 60314051 1 + G A SKCM 60314048 + 60314028 60314068 41 AGATATATCGTCAGAAGCTACAAGATCTGAATGACCTTCGC AGATATATCGTCAGAAGCTACAAAATCTGAATGACCTTCGC < 41bp 0.713741433482138 0.486741072877542 0.8558694 0.7396437 prediction 0.427482866964277 Functional Loss - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60314048 chr1:60314051 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_86634 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:60314042-60314072
64251 chr4 15004655 15004655 1 + G A rs7435318 15004652 + 15004632 15004672 41 CGGCGGCCACGGAGAAACTCCCCGACCACCACCCCGGCGGC CGGCGGCCACGGAGAAACTCCCCAACCACCACCCCGGCGGC < 41bp 0.794753404406058 0.581012729908229 0.76865125 0.3704666 prediction 0.427481348995659 Functional Loss - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15004652 chr4:15004655 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_86636 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:15004655-15004656
64251 chr1 78546507 78546507 1 + C T UCEC 78546505 + 78546485 78546525 41 TCTGAGGATTCACTTGGTCTCACCATTACAGATAATGGTGT TCTGAGGATTCACTTGGTCTCATCATTACAGATAATGGTGT < 41bp 0.71373742219354 0.423976649790093 0.14089787 0.11770666 prediction 0.427474844387081 Functional Loss - GIPC2 ENSG00000137960 CDS Human protein_coding chr1:78546505 chr1:78546507 nonsynonymous SNV 0.533 1 23 hm5C_associated_SNPs_86637 0 0 1 PPIG POSTAR2 ENCODE chr1:78546418-78546530
64251 chr12 113873198 113873198 1 + G A UCEC 113873195 + 113873175 113873215 41 TGAGGACCCCACCAGGTGCCCTGGTGCTGGCAGTTGGGGGT TGAGGACCCCACCAGGTGCCCTGATGCTGGCAGTTGGGGGT < 41bp 0.817267444188505 0.603531751093522 0.64087033 0.36448884 prediction 0.427471386189965 Functional Loss - SDSL ENSG00000139410 CDS Human protein_coding chr12:113873195 chr12:113873198 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_86639 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:113873190-113873231
64251 chr17 61889335 61889335 1 + G A STAD 61889332 + 61889312 61889352 41 GATTGTGGAGATTCTCCATTCTGGACCTAGTAAATGGAACT GATTGTGGAGATTCTCCATTCTGAACCTAGTAAATGGAACT < 41bp 0.776424912260606 0.562701142079226 0.15330291 0.11327726 prediction 0.427447540362759 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61889332 chr17:61889335 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_86646 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:61889301-61889342
64251 chr19 2873517 2873517 1 + G A SKCM 2873514 + 2873494 2873534 41 GACACAGTGGTCTTTGAAGACGTGGTTGTGGATTTCACGCT GACACAGTGGTCTTTGAAGACGTAGTTGTGGATTTCACGCT < 41bp 0.713718063453389 0.474463962568565 0.33379644 0.15960473 prediction 0.427436126906777 Functional Loss - ZNF556 ENSG00000172000 CDS Human protein_coding chr19:2873514 chr19:2873517 synonymous SNV . 0 24 hm5C_associated_SNPs_86648 0 0 2 GRWD1 POSTAR2 ENCODE chr19:2873504-2873635
64251 chr1 206626644 206626644 1 + C T COAD 206626641 + 206626621 206626661 41 GAGCATCCCTGCTGCTTTACCAGCGGGCTTCCGACGACTGG GAGCATCCCTGCTGCTTTACCAGTGGGCTTCCGACGACTGG < 41bp 0.73498952191594 0.521287924827674 0.895004 0.8177393 prediction 0.427403194176531 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206626641 chr1:206626644 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_86662 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206626635-206626674
64251 chr1 156348204 156348204 1 + G A rs113186314 156348201 + 156348181 156348221 41 GCCATGATTGGTGAGGCCTTCGAGGTGCGGTAGCAGGGCAG GCCATGATTGGTGAGGCCTTCGAAGTGCGGTAGCAGGGCAG < 41bp 0.809657209133179 0.595956646737356 0.90678275 0.6545037 prediction 0.427401124791646 Functional Loss - RHBG ENSG00000132677 intronic Human protein_coding chr1:156348201 chr1:156348204 . . 0 24 hm5C_associated_SNPs_86663 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156348182-156348220
64251 chr10 22618314 22618314 1 + C T LIHC 22618312 + 22618292 22618332 41 ACCTCTTCTTGTTTGCCTAGCCCCAGTACTCCAGTGCAGTC ACCTCTTCTTGTTTGCCTAGCCTCAGTACTCCAGTGCAGTC < 41bp 0.713700426511559 0.432328417918238 0.19871181 0.007439524 prediction 0.427400853023118 Functional Loss - BMI1;COMMD3-BMI1 ENSG00000168283;ENSG00000269897 CDS Human other chr10:22618312 chr10:22618314 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_86664 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:22618275-22618324
64251 chr2 74154136 74154136 1 + C T ESCA 74154134 + 74154114 74154154 41 TTTCCTCCTCCAGAGGCCTGCACGCGGGGCGCGGGCCCCGA TTTCCTCCTCCAGAGGCCTGCATGCGGGGCGCGGGCCCCGA < 41bp 0.787084630111343 0.57339640765453 0.88486135 0.83081037 prediction 0.427376444913625 Functional Loss - DGUOK ENSG00000114956 CDS Human protein_coding chr2:74154134 chr2:74154136 synonymous SNV . 0 23 hm5C_associated_SNPs_86672 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74154126-74154153
64251 chr12 56117674 56117674 1 + G A LUAD 56117671 + 56117651 56117691 41 CGCTCTGCCCCGACTCTAGGCGGGATGTAGCTCATTTTGGG CGCTCTGCCCCGACTCTAGGCGGAATGTAGCTCATTTTGGG < 41bp 0.798184842441861 0.584497495889788 0.6067227 0.37454617 prediction 0.427374693104145 Functional Loss - RDH5 ENSG00000135437 CDS Human protein_coding chr12:56117671 chr12:56117674 nonsynonymous SNV 0.786 2 24 hm5C_associated_SNPs_86673 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:56117666-56117694
64251 chr8 97892115 97892115 1 + G A UCEC 97892112 + 97892092 97892132 41 GGAAGATGCAGAAATGATGTCAAGAATGGCTTCTCATGGGA GGAAGATGCAGAAATGATGTCAAAAATGGCTTCTCATGGGA < 41bp 0.777523297011343 0.563842372872943 0.12675634 0.08910325 prediction 0.4273618482768 Functional Loss - CPQ ENSG00000104324 CDS Human protein_coding chr8:97892112 chr8:97892115 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_86681 0 0 5 DDX24 POSTAR2 ENCODE chr8:97892058-97892142
64251 chr15 85164629 85164629 1 + G A UCEC 85164626 + 85164606 85164646 41 GACTGTGGGCAGAGGTTCAGCCAGAGTTCAGCCCTCATCAC GACTGTGGGCAGAGGTTCAGCCAAAGTTCAGCCCTCATCAC < 41bp 0.815792930496061 0.602123100890041 0.3930707 0.072021425 prediction 0.42733965921204 Functional Loss - ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164626 chr15:85164629 synonymous SNV . 0 24 hm5C_associated_SNPs_86688 0 0 1 BUD13 POSTAR2 ENCODE chr15:85164594-85164645
64251 chr14 20923818 20923818 1 + G C BRCA 20923814 + 20923794 20923834 41 TCGTAACGGGAATGCCGAAGCGTGGGAAAAAGGGAGCGGTG TCGTAACGGGAATGCCGAAGCGTGCGAAAAAGGGAGCGGTG < 41bp 0.867036258730404 0.653367724268475 0.5970127 0.26005834 prediction 0.42733706892386 Functional Loss - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20923814 chr14:20923818 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_86690 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20923800-20923820
64251 chr17 7465478 7465478 1 + G T rs576008562 7465476 + 7465456 7465496 41 GAGACGGCTGCGCCTAAAGACAGCAGGAGTGGCGGGGCCGC GAGACGGCTGCGCCTAAAGACATCAGGAGTGGCGGGGCCGC < 41bp 0.906925572568802 0.693265204045002 0.3693375 0.16949269 prediction 0.4273207370476 Functional Loss - SENP3-EIF4A1 ENSG00000161956 UTR5 Human protein_coding chr17:7465476 chr17:7465478 . . 0 23 hm5C_associated_SNPs_86695 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7465458-7465489
64251 chr3 119530564 119530564 1 + G A SARC 119530561 + 119530541 119530581 41 GACACTACCTTCTCCCATTTCAAGAATTTCCGGGTAGGAGG GACACTACCTTCTCCCATTTCAAAAATTTCCGGGTAGGAGG < 41bp 0.797083306228179 0.583423194912473 0.23109543 0.061713845 prediction 0.427320222631412 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119530561 chr3:119530564 synonymous SNV . 0 24 hm5C_associated_SNPs_86696 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119530538-119530616
64251 chr8 42019858 42019858 1 + C T STAD 42019855 + 42019835 42019875 41 AGCTGTCAGTGGTGCCTTGGCGACGGACTGGGGTGAAATAT AGCTGTCAGTGGTGCCTTGGCGATGGACTGGGGTGAAATAT < 41bp 0.740036184166828 0.526382120855233 0.5876157 0.3618083 prediction 0.42730812662319 Functional Loss - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42019855 chr8:42019858 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_86700 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:42019839-42019869
64251 chr15 99901591 99901591 1 + C T PRAD 99901588 + 99901568 99901608 41 GGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTT GGTGAAGCTGCTTTCCTTTTCATTAGGGCAGCGAACCGTTT < 41bp 0.730827027628962 0.517173091306676 0.108775675 0.17966291 prediction 0.427307872644572 Functional Loss - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99901588 chr15:99901591 nonsynonymous SNV 0.965 2 24 hm5C_associated_SNPs_86701 0 0 3 GRWD1 POSTAR2 ENCODE chr15:99901574-99901722
64251 chr1 214507632 214507632 1 + G A UCEC 214507629 + 214507609 214507649 41 GGGCCTGGAACACAAAGCCGCAGGGGAGAAAGCCCTGAAGA GGGCCTGGAACACAAAGCCGCAGAGGAGAAAGCCCTGAAGA < 41bp 0.785556980542872 0.571905649420265 0.9144542 0.63921684 prediction 0.427302662245213 Functional Loss - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214507629 chr1:214507632 nonsynonymous SNV 0.793 4 24 hm5C_associated_SNPs_86704 0 0 2 PPIG POSTAR2 ENCODE chr1:214507565-214507650
64251 chr20 43566815 43566815 1 + G T UCEC 43566812 + 43566792 43566832 41 TGTTGCTCATGCTGGAGTCTCCAGAATCCCTCCATGCCAAG TGTTGCTCATGCTGGAGTCTCCATAATCCCTCCATGCCAAG < 41bp 0.713649532930646 0.313268248664001 0.8808998 0.11827654 prediction 0.427299065861292 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566812 chr20:43566815 stopgain 0.998 1 24 hm5C_associated_SNPs_86706 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:43566781-43566824
64251 chr5 145834750 145834750 1 + G A HNSC 145834747 + 145834727 145834767 41 GCGAGGCCCTCCTCCACCACCACGGCCGCCCTTTGGACGTC GCGAGGCCCTCCTCCACCACCACAGCCGCCCTTTGGACGTC < 41bp 0.813105209646557 0.599457924701854 0.64793575 0.37368947 prediction 0.427294569889407 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145834747 chr5:145834750 nonsynonymous SNV 0.976 3 24 hm5C_associated_SNPs_86707 0 0 2 BUD13 POSTAR2 ENCODE chr5:145834723-145834751
64251 chr14 21463003 21463003 1 + C T UCEC 21463000 + 21462980 21463020 41 TTTTCCTTAAGTGAACTGCCCAGCAAGGCTGACCGCACTGA TTTTCCTTAAGTGAACTGCCCAGTAAGGCTGACCGCACTGA < 41bp 0.762849502661166 0.549204290212161 0.14353973 0.30449712 prediction 0.427290424898011 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21463000 chr14:21463003 synonymous SNV . 0 24 hm5C_associated_SNPs_86708 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:21462962-21463019
64251 chrX 102841696 102841696 1 + A T KIRC 102841692 + 102841672 102841712 41 GCCACAAGACGAGAGAAAGCCAGAAGTAACTTGTACTCTGG GCCACAAGACGAGAGAAAGCCAGATGTAACTTGTACTCTGG < 41bp 0.878664168311834 0.66502052716044 0.9022015 0.91147417 prediction 0.427287282302789 Functional Loss - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841692 chrX:102841696 nonsynonymous SNV 0.983 0 25 hm5C_associated_SNPs_86709 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:102841598-102841697
64251 chr6 170175417 170175417 1 + G T UCEC 170175414 + 170175394 170175434 41 TTTGGGCTCTGCTGCCTTTCCCCGAAGAACTCACTCGGCAA TTTGGGCTCTGCTGCCTTTCCCCTAAGAACTCACTCGGCAA < 41bp 0.934945760919499 0.721304135472806 0.35191804 0.108112276 prediction 0.427283250893385 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170175414 chr6:170175417 stopgain 0.000 0 24 hm5C_associated_SNPs_86712 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:170175399-170175425
64251 chr16 2546300 2546300 1 + C T COAD 2546297 + 2546277 2546317 41 ACTGGGCCCAAAGCCACGCCCTGCGGGGAAAGGTGTACCAG ACTGGGCCCAAAGCCACGCCCTGTGGGGAAAGGTGTACCAG < 41bp 0.760300911812308 0.546664479601815 0.5396843 0.4976181 prediction 0.427272864420985 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546297 chr16:2546300 nonsynonymous SNV 0.365 4 24 hm5C_associated_SNPs_86717 1 0 1 DDX6 POSTAR2 ENCODE chr16:2546279-2546309
64251 chr15 63796865 63796865 1 + G C rs551488327 63796861 + 63796841 63796881 41 CGGCTAGAAGCGACACCAGACGGAGCCTCCGGAGTTCCTCC CGGCTAGAAGCGACACCAGACGGACCCTCCGGAGTTCCTCC < 41bp 0.713631921426046 0.440877052693416 0.85339475 0.209335 prediction 0.427263842852092 Functional Loss - USP3 ENSG00000140455 UTR5 Human protein_coding chr15:63796861 chr15:63796865 . . 0 25 hm5C_associated_SNPs_86722 0 0 4 DDX3X POSTAR2 ENCODE chr15:63796799-63796917
64251 chr20 30193543 30193543 1 + C T rs200577120 30193541 + 30193521 30193561 41 TCGGAATCCGAAGTTGGAACCCCCGGGGGCCGAGGGCTGCC TCGGAATCCGAAGTTGGAACCCTCGGGGGCCGAGGGCTGCC < 41bp 0.713629851162323 0.466830419739155 0.4487461 0.4649021 prediction 0.427259702324647 Functional Loss - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193541 chr20:30193543 nonsynonymous SNV 0.050 0 23 hm5C_associated_SNPs_86724 0 0 4 DDX6 POSTAR2 ENCODE chr20:30193532-30193582
64251 chr1 156107534 156107534 1 + C T rs4641 156107532 + 156107512 156107552 41 ATGACCTGCTCCATCACCACCACGTGAGTGGTAGCCGCCGC ATGACCTGCTCCATCACCACCATGTGAGTGGTAGCCGCCGC < 41bp 0.713620031911004 0.460200152288231 0.75868034 0.6764117 prediction 0.427240063822008 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156107532 chr1:156107534 synonymous SNV . 0 23 hm5C_associated_SNPs_86728 14 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156107514-156107537
64251 chr8 66617088 66617088 1 + C T SKCM 66617086 + 66617066 66617106 41 CACTGCAGAAGATTTGCGCTCTCGAAAATGAACTTGCTGCT CACTGCAGAAGATTTGCGCTCTTGAAAATGAACTTGCTGCT < 41bp 0.881904374551767 0.668285933758299 0.8846369 0.51808286 prediction 0.427236881586935 Functional Loss - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66617086 chr8:66617088 synonymous SNV . 0 23 hm5C_associated_SNPs_86730 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:66617059-66617089
64251 chr2 30785113 30785113 1 + G A UCEC 30785110 + 30785090 30785130 41 TTGATTACTTTTGTGATATTCACGAACCACTTCAACTCCTC TTGATTACTTTTGTGATATTCACAAACCACTTCAACTCCTC < 41bp 0.755486916192382 0.541872216264091 0.031617492 0.03847462 prediction 0.427229399856582 Functional Loss - LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30785110 chr2:30785113 nonsynonymous SNV 0.629 3 24 hm5C_associated_SNPs_86731 0 0 20 EWSR1 POSTAR2 SRX029343 chr2:30785100-30785120
64251 chr7 128482643 128482643 1 + G A COAD 128482640 + 128482620 128482660 41 CTCCCGCAGGTGAACGTGGGCGAGGGCAGCCACCCCGAGCG CTCCCGCAGGTGAACGTGGGCGAAGGCAGCCACCCCGAGCG < 41bp 0.797648114231133 0.584035894503994 0.9152043 0.9096656 prediction 0.427224439454279 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128482640 chr7:128482643 synonymous SNV . 0 24 hm5C_associated_SNPs_86736 0 0 5 FMR1 POSTAR2 ENCODE chr7:128482628-128482664
64251 chr16 88110273 88110273 1 + G T rs201534157 88110269 + 88110249 88110289 41 GGCCATCCAGATTCAGTGAGCGGTGCCCATGGCACCAGGAG GGCCATCCAGATTCAGTGAGCGGTTCCCATGGCACCAGGAG < 41bp 0.713610997035639 0.499952118805404 0.10963237 0.17028436 prediction 0.427221994071278 Functional Loss - BANP ENSG00000172530 UTR3 Human protein_coding chr16:88110269 chr16:88110273 . . 0 25 hm5C_associated_SNPs_86737 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:88110253-88110291
64251 chr3 3182241 3182241 1 + C T COAD 3182238 + 3182218 3182258 41 ACTACACTACGGATTGATGTCACCACTGATGGAAGACATGC ACTACACTACGGATTGATGTCACTACTGATGGAAGACATGC < 41bp 0.765108111010638 0.551498263325251 0.02443409 0.05712223 prediction 0.427219695370773 Functional Loss - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3182238 chr3:3182241 synonymous SNV . 0 24 hm5C_associated_SNPs_86738 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:3182207-3182307
64251 chr19 45175238 45175238 1 + C T BLCA 45175236 + 45175216 45175256 41 ATGGGGACCCAGGGCTGCTTCTCAAAGAGCCTCCTGCTCTC ATGGGGACCCAGGGCTGCTTCTTAAAGAGCCTCCTGCTCTC < 41bp 0.836590753721307 0.62298125486454 0.6986066 0.16226053 prediction 0.427218997713533 Functional Loss - CEACAM19 ENSG00000186567 CDS Human protein_coding chr19:45175236 chr19:45175238 nonsynonymous SNV 0.735 0 23 hm5C_associated_SNPs_86739 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:45175210-45175242
64251 chr1 224564208 224564208 1 + A T rs113994437 224564204 + 224564184 224564224 41 TCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCT TCCACAATCACCCCCAAACCCAGATAATCCCCACTGGCTCT < 41bp 0.713603153598237 0.425057434921867 0.24720651 0.36493757 prediction 0.427206307196475 Functional Loss - CNIH4 ENSG00000143771 UTR3 Human protein_coding chr1:224564204 chr1:224564208 . . 0 25 hm5C_associated_SNPs_86743 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:224564208-224564241
64251 chr19 10398394 10398394 1 + T C STAD 10398393 + 10398373 10398413 41 CTGGATCTGGCCAACGTGACCTTGACCTACGAGTTTGCTGC CTGGATCTGGCCAACGTGACCCTGACCTACGAGTTTGCTGC < 41bp 0.8008503836619 0.587253480790867 0.057938397 0.032306463 prediction 0.427193805742065 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398393 chr19:10398394 nonsynonymous SNV 0.048 1 22 hm5C_associated_SNPs_86747 0 0 1 SND1 POSTAR2 ENCODE chr19:10398393-10398459
64251 chr3 171965342 171965342 1 + G A UCEC 171965339 + 171965319 171965359 41 TTAGGTGATTGAAGATAGTACTGGAGTCCGCCGGGTGGTGG TTAGGTGATTGAAGATAGTACTGAAGTCCGCCGGGTGGTGG < 41bp 0.786264888373408 0.572674518765973 0.33808106 0.2410106 prediction 0.427180739214871 Functional Loss - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:171965339 chr3:171965342 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_86750 0 0 4 HNRNPK POSTAR2 ENCODE chr3:171965342-171965465
64251 chr3 196613454 196613454 1 + G A UCEC 196613451 + 196613431 196613471 41 ACCCTTACTGTAAAAGTCCACTGGAGGCTCCCTTGGTGTGC ACCCTTACTGTAAAAGTCCACTGAAGGCTCCCTTGGTGTGC < 41bp 0.760666296860801 0.547077443111472 0.19463187 0.04358208 prediction 0.427177707498659 Functional Loss - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196613451 chr3:196613454 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_86751 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:196613418-196613454
64251 chr1 52879611 52879611 1 + C T SKCM 52879608 + 52879588 52879628 41 GCTACCGAGACTTGGACAAGCCCCGTCGCTCTCCCACACTG GCTACCGAGACTTGGACAAGCCCTGTCGCTCTCCCACACTG < 41bp 0.713587809391644 0.495614725002281 0.15003273 0.13824826 prediction 0.427175618783288 Functional Loss - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52879608 chr1:52879611 nonsynonymous SNV 0.615 3 24 hm5C_associated_SNPs_86752 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:52879593-52879613
64251 chr19 39868153 39868153 1 + A C COAD 39868149 + 39868129 39868169 41 TGCTGGAAGGCGGGAACCTACGAAACGCTCTGCAGGAGCTG TGCTGGAAGGCGGGAACCTACGAACCGCTCTGCAGGAGCTG < 41bp 0.713586246893587 0.293019457837938 0.3412431 0.36364377 prediction 0.427172493787174 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868149 chr19:39868153 nonsynonymous SNV 0.978 2 25 hm5C_associated_SNPs_86754 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39868136-39868172
64251 chr1 230417375 230417375 1 + G A rs6541308 230417372 + 230417352 230417392 41 TCTCAGCCTTCCTATCATCCCACGTGTCTACCCAGACCCTT TCTCAGCCTTCCTATCATCCCACATGTCTACCCAGACCCTT < 41bp 0.722200172087164 0.508614274771048 0.28173575 0.15072462 prediction 0.427171794632231 Functional Loss - GALNT2 ENSG00000224407 ncRNA_exonic Human antisense chr1:230417372 chr1:230417375 . . 0 24 hm5C_associated_SNPs_86755 0 0 7 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr1:230417361-230417382
64251 chr7 148922717 148922717 1 + G A rs116786079 148922714 + 148922694 148922734 41 ATGATTTGTTCCAGTTCTCCCAGGGCAGAGGGGCGAGGGAG ATGATTTGTTCCAGTTCTCCCAGAGCAGAGGGGCGAGGGAG < 41bp 0.784345564037747 0.570768950330493 0.88999087 0.5892339 prediction 0.427153227414508 Functional Loss - ZNF282 ENSG00000170265 UTR3 Human protein_coding chr7:148922714 chr7:148922717 . . 0 24 hm5C_associated_SNPs_86760 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148922693-148922719
64251 chr4 38907442 38907442 1 + G T LUSC 38907439 + 38907419 38907459 41 CACTTCCCCTTCATCAGCCTCTCGGGGTATGCTGTCTGCCA CACTTCCCCTTCATCAGCCTCTCTGGGTATGCTGTCTGCCA < 41bp 0.713576469448894 0.308184316494353 0.02946198 0.058650285 prediction 0.427152938897788 Functional Loss - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38907439 chr4:38907442 nonsynonymous SNV 0.058 3 24 hm5C_associated_SNPs_86761 0 0 5 DDX24 POSTAR2 ENCODE chr4:38907375-38907476
64251 chr15 29409706 29409706 1 + C T rs62007245 29409704 + 29409684 29409724 41 CGCCTCCGAGGGACGCGGCTCCCGGGGCAGGGCAGCCGTCA CGCCTCCGAGGGACGCGGCTCCTGGGGCAGGGCAGCCGTCA < 41bp 0.739655320569208 0.526080474880369 0.7013379 0.6947234 prediction 0.427149691377678 Functional Loss - APBA2 ENSG00000034053 UTR3 Human protein_coding chr15:29409704 chr15:29409706 . . 0 23 hm5C_associated_SNPs_86764 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:29409662-29409715
64251 chr8 28575003 28575003 1 + T C STAD 28575002 + 28574982 28575022 41 AGCTTCCCTACCAGGACATGCTGCAGTGGAACGAGGCGGCC AGCTTCCCTACCAGGACATGCCGCAGTGGAACGAGGCGGCC < 41bp 0.713573703122564 0.462215927580016 0.5058791 0.33460182 prediction 0.427147406245128 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575002 chr8:28575003 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_86765 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr8:28574978-28575023
64251 chr2 46203638 46203638 1 + G T LUSC 46203635 + 46203615 46203655 41 AGGAAGCGGCAGGGGGCCGTCAGGCGCAGGGTCCATCAGGT AGGAAGCGGCAGGGGGCCGTCAGTCGCAGGGTCCATCAGGT < 41bp 0.713560901231849 0.343472795744705 0.91059554 0.35821712 prediction 0.427121802463697 Functional Loss - PRKCE ENSG00000171132 CDS Human protein_coding chr2:46203635 chr2:46203638 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_86770 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:46203620-46203640
64251 chr4 74608459 74608459 1 + G A rs115993429 74608456 + 74608436 74608476 41 AAGGATTTTCCTAGATATTGCACGGGAGAATATACAAATAG AAGGATTTTCCTAGATATTGCACAGGAGAATATACAAATAG < 41bp 0.720352536158239 0.506792426546556 0.12619734 0.05095887 prediction 0.427120219223367 Functional Loss - CXCL8 ENSG00000169429 UTR3 Human protein_coding chr4:74608456 chr4:74608459 . . 0 24 hm5C_associated_SNPs_86771 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr4:74608160-74608560
64251 chr3 51697263 51697263 1 + C T LUSC 51697261 + 51697241 51697281 41 TGTCTTGCCCAGCAACCTTTCGCGGGGCATGTCTATCTATC TGTCTTGCCCAGCAACCTTTCGTGGGGCATGTCTATCTATC < 41bp 0.713552147477992 0.446421587858512 0.88560873 0.93198633 prediction 0.427104294955985 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51697261 chr3:51697263 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_86774 0 0 4 CPSF2 POSTAR2 GSE37401,GSM917670 chr3:51697242-51697271
64251 chr8 37602261 37602261 1 + G A LUAD 37602258 + 37602238 37602278 41 GCCGTGCTTAAGCAGGGTTCCTGGAACCCCGCGTCTCTCCA GCCGTGCTTAAGCAGGGTTCCTGAAACCCCGCGTCTCTCCA < 41bp 0.713550978849681 0.477344555184245 0.3717248 0.25436497 prediction 0.427101957699362 Functional Loss - ERLIN2 ENSG00000147475 CDS Human protein_coding chr8:37602258 chr8:37602261 stopgain 0.003 0 24 hm5C_associated_SNPs_86776 0 0 1 PRPF8 POSTAR2 ENCODE chr8:37602206-37602261
64251 chr17 79973128 79973128 1 + C T CESC 79973126 + 79973106 79973146 41 CTCTCCAAGCACTGGTCAGCCTCCATGCCACCCAGTCTGCC CTCTCCAAGCACTGGTCAGCCTTCATGCCACCCAGTCTGCC < 41bp 0.713549736852238 0.437063226580751 0.982865 0.062416673 prediction 0.427099473704476 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79973126 chr17:79973128 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_86780 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:79973104-79973132
64251 chr3 14708348 14708348 1 + T C LIHC 14708347 + 14708327 14708367 41 TAATGAAAAAACCCTATTATCTGAAGATATGAGAAAAGAAC TAATGAAAAAACCCTATTATCCGAAGATATGAGAAAAGAAC < 41bp 0.713541668073891 0.458198988749028 0.20715275 0.42691863 prediction 0.427083336147781 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14708347 chr3:14708348 synonymous SNV . 0 22 hm5C_associated_SNPs_86789 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:14708345-14708377
64251 chr11 43923167 43923167 1 + C T COAD 43923164 + 43923144 43923184 41 CTTTATCGCAATGAGAAGGACAGCGTGGACTGGCACAGTGA CTTTATCGCAATGAGAAGGACAGTGTGGACTGGCACAGTGA < 41bp 0.73527069512265 0.521729629925031 0.4692205 0.4495199 prediction 0.427082130395237 Functional Loss - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43923164 chr11:43923167 synonymous SNV . 0 24 hm5C_associated_SNPs_86790 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:43923147-43923197
64251 chr16 70513219 70513219 1 + T C LUAD 70513218 + 70513198 70513238 41 CGTGCATGGCCAGAGCCTGGCTGGGGCAGGCGGTGGAGGCT CGTGCATGGCCAGAGCCTGGCCGGGGCAGGCGGTGGAGGCT < 41bp 0.804665475596141 0.591128166309858 0.87028944 0.9165503 prediction 0.427074618572566 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70513218 chr16:70513219 synonymous SNV . 0 22 hm5C_associated_SNPs_86792 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:70513201-70513225
64251 chr16 21983256 21983256 1 + A T STAD 21983252 + 21983232 21983272 41 ATCTGGCCCCAGGTGAAATCCGAGAACAGAATGGAGACAGT ATCTGGCCCCAGGTGAAATCCGAGTACAGAATGGAGACAGT < 41bp 0.898161520877791 0.68462591857858 0.8521408 0.8620285 prediction 0.427071204598422 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21983252 chr16:21983256 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_86793 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:21983246-21983267
64251 chr20 30418689 30418689 1 + G A COAD 30418686 + 30418666 30418706 41 GATCATTGACTTTGGCCTGGCACGGAGGTACCACCTGGGTG GATCATTGACTTTGGCCTGGCACAGAGGTACCACCTGGGTG < 41bp 0.713534031363456 0.46011726604644 0.21509954 0.18745786 prediction 0.427068062726911 Functional Loss - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30418686 chr20:30418689 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_86795 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr20:30418664-30418690
64251 chr22 50280305 50280305 1 + G A CESC 50280302 + 50280282 50280322 41 GCCGCCTGTCTGCCACCCTCCACGACCCGCGGTACGTCTTC GCCGCCTGTCTGCCACCCTCCACAACCCGCGGTACGTCTTC < 41bp 0.803354376309178 0.589821482930116 0.032961935 0.025801301 prediction 0.427065786758125 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50280302 chr22:50280305 nonsynonymous SNV 0.464 3 24 hm5C_associated_SNPs_86796 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr22:50280300-50280320
64251 chr1 156180047 156180047 1 + C T HNSC 156180045 + 156180025 156180065 41 TTCCAGGTTGAGGGCAAGAACTCCATCATCCTGACCTTCAG TTCCAGGTTGAGGGCAAGAACTTCATCATCCTGACCTTCAG < 41bp 0.868259840993745 0.654730095327575 0.9422585 0.072570056 prediction 0.427059491332338 Functional Loss - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156180045 chr1:156180047 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_86797 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156180026-156180054
64251 chrX 30236748 30236748 1 + G A SARC 30236745 + 30236725 30236765 41 CGTGCCCGTGAGAAACGCCGCAAGGCCCGAGATGAGACCCG CGTGCCCGTGAGAAACGCCGCAAAGCCCGAGATGAGACCCG < 41bp 0.80532698035687 0.591798845154401 0.27739018 0.063476115 prediction 0.427056270404938 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236745 chrX:30236748 synonymous SNV . 0 24 hm5C_associated_SNPs_86798 0 0 2 DDX3X POSTAR2 ENCODE chrX:30236692-30236760
64251 chr6 26158719 26158719 1 + G A BLCA 26158716 + 26158696 26158736 41 GCCTGCTGCTTCCGGGGGAGCTGGCCAAGCACGCCGTGTCG GCCTGCTGCTTCCGGGGGAGCTGACCAAGCACGCCGTGTCG < 41bp 0.808231986670844 0.594711642992637 0.9105147 0.9073395 prediction 0.427040687356413 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158716 chr6:26158719 nonsynonymous SNV 0.973 2 24 hm5C_associated_SNPs_86801 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158660-26158720
64251 chr20 44469901 44469901 1 + C T rs140286266 44469898 + 44469878 44469918 41 CTGCAGGAGGCAGGCCTTACCCCCACACCACCCCCCAGTCT CTGCAGGAGGCAGGCCTTACCCCTACACCACCCCCCAGTCT < 41bp 0.729380365735953 0.515861401892232 0.089036494 0.19681418 prediction 0.427037927687443 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44469898 chr20:44469901 synonymous SNV . 0 24 hm5C_associated_SNPs_86804 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44469892-44469915
64251 chr2 47630474 47630474 1 + G A LUAD 47630471 + 47630451 47630491 41 GACTTCTATACGGCGCACGGCGAGGACGCGCTGCTGGCCGC GACTTCTATACGGCGCACGGCGAAGACGCGCTGCTGGCCGC < 41bp 0.779874181590861 0.56636510213232 0.888046 0.8304217 prediction 0.427018158917082 Functional Loss - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47630471 chr2:47630474 synonymous SNV . 0 24 hm5C_associated_SNPs_86812 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr2:47630457-47630511
64251 chr16 57416326 57416326 1 + C T rs142113631 57416323 + 57416303 57416343 41 CTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCA CTTTTCCGAGTGCCTCCCGTCTCTACTGCCGCCACGTGGCA < 41bp 0.717939650334507 0.504433110346138 0.950518 0.8856076 prediction 0.427013079976737 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416323 chr16:57416326 synonymous SNV . 0 24 hm5C_associated_SNPs_86814 0 0 4 RBM15 POSTAR2 ENCODE chr16:57416299-57416343
64251 chr19 1913034 1913034 1 + G T LUAD 1913031 + 1913011 1913051 41 TCTTCTACGGTGCGCCCTCGCCCGACGGCGCCCTGGGCACC TCTTCTACGGTGCGCCCTCGCCCTACGGCGCCCTGGGCACC < 41bp 0.713503158469792 0.334036985223012 0.09616122 0.07328269 prediction 0.427006316939584 Functional Loss - ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1913031 chr19:1913034 nonsynonymous SNV 0.045 3 24 hm5C_associated_SNPs_86816 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1913018-1913060
64251 chr7 65546855 65546855 1 + G A UCEC 65546852 + 65546832 65546872 41 CCCATCATGGAGAAGTTCAACGCGTCCATTGCCTACGACCG CCCATCATGGAGAAGTTCAACGCATCCATTGCCTACGACCG < 41bp 0.713501839355939 0.468264112879398 0.28736508 0.24254361 prediction 0.427003678711878 Functional Loss - ASL ENSG00000126522 CDS Human protein_coding chr7:65546852 chr7:65546855 synonymous SNV . 0 24 hm5C_associated_SNPs_86818 0 0 7 BUD13 POSTAR2 ENCODE chr7:65546852-65546939
64251 chr19 2810332 2810332 1 + G A BLCA 2810329 + 2810309 2810349 41 TCGCCATGTTCAGCGGGACCCACGTGGAGCGGGACTTTGTG TCGCCATGTTCAGCGGGACCCACATGGAGCGGGACTTTGTG < 41bp 0.713496895290767 0.474527292308075 0.75389135 0.40025124 prediction 0.426993790581534 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810329 chr19:2810332 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_86822 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:2810314-2810343
64251 chr14 29237297 29237297 1 + G A STAD 29237294 + 29237274 29237314 41 CGTGTTCATCGGCGGCACCACGGGCAAGCTGCGGCGCCGCT CGTGTTCATCGGCGGCACCACGGACAAGCTGCGGCGCCGCT < 41bp 0.815693662630508 0.602197275280871 0.8918978 0.43735042 prediction 0.426992774699273 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237294 chr14:29237297 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86824 1 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:29237297-29237298
64251 chr14 24607279 24607279 1 + C T STAD 24607276 + 24607256 24607296 41 AGGTCACCACCTGGTTGCAGCTGCAGATACCTCGGATTGAG AGGTCACCACCTGGTTGCAGCTGTAGATACCTCGGATTGAG < 41bp 0.756420839567304 0.542927453289049 0.1503838 0.17434928 prediction 0.42698677255651 Functional Loss - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607276 chr14:24607279 stopgain 0.993 1 24 hm5C_associated_SNPs_86826 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24607258-24607289
64251 chr20 8862382 8862382 1 + C T LGG 8862380 + 8862360 8862400 41 AGATCAGTGAAGACAGCAATCACGGTTCTGCCCCTCTCTCC AGATCAGTGAAGACAGCAATCATGGTTCTGCCCCTCTCTCC < 41bp 0.732056992336197 0.518567651302986 0.87603056 0.8749709 prediction 0.426978682066421 Functional Loss - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8862380 chr20:8862382 synonymous SNV . 0 23 hm5C_associated_SNPs_86828 0 0 2 GRWD1 POSTAR2 ENCODE chr20:8862379-8862447
64251 chr3 57817251 57817251 1 + C T UCEC 57817249 + 57817229 57817269 41 AGTAGACGTGACAGAGAATACACGGAAAGGTACGGGTATGG AGTAGACGTGACAGAGAATACATGGAAAGGTACGGGTATGG < 41bp 0.71348652713619 0.450596232107212 0.21014756 0.18247047 prediction 0.42697305427238 Functional Loss - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57817249 chr3:57817251 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_86831 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:57817198-57817253
64251 chr22 44323012 44323012 1 + G A COAD 44323009 + 44322989 44323029 41 TGTCTGATGGGGAAAACGTTCTGGTGTCTGACTTTCGGTCC TGTCTGATGGGGAAAACGTTCTGATGTCTGACTTTCGGTCC < 41bp 0.813967362634406 0.600482409130694 0.3902338 0.2742235 prediction 0.426969907007426 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44323009 chr22:44323012 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_86834 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr22:44323002-44323026
64251 chr19 42410730 42410730 1 + G T LUAD 42410728 + 42410708 42410748 41 CAGCACGGACCCAGGAAATCCAGGAGAACCTGCTCAGCTTG CAGCACGGACCCAGGAAATCCATGAGAACCTGCTCAGCTTG < 41bp 0.910940352470176 0.697456248347139 0.8970884 0.14478144 prediction 0.426968208246075 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42410728 chr19:42410730 nonsynonymous SNV 0.976 1 23 hm5C_associated_SNPs_86835 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:42410720-42410735
64251 chr7 106508605 106508605 1 + C T HNSC 106508603 + 106508583 106508623 41 CCCAAGCTCTACGCCATGCACCCGTGGGTGACGTCCAAGCC CCCAAGCTCTACGCCATGCACCTGTGGGTGACGTCCAAGCC < 41bp 0.713481982280033 0.439568304100174 0.26103216 0.17898893 prediction 0.426963964560066 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508603 chr7:106508605 nonsynonymous SNV 0.990 2 23 hm5C_associated_SNPs_86836 0 0 2 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr9 127118550 127118550 1 + G A rs7857897 127118547 + 127118527 127118567 41 CCACTGAGCCGAGGGGCCCACTCGGCATGTAGGCTCAGGCT CCACTGAGCCGAGGGGCCCACTCAGCATGTAGGCTCAGGCT < 41bp 0.808210585069367 0.594736106533577 0.22057012 0.28980058 prediction 0.42694895707158 Functional Loss - LOC100129034 ENSG00000136930 intronic Human protein_coding chr9:127118547 chr9:127118550 . . 0 24 hm5C_associated_SNPs_86842 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:127118542-127118574
64251 chr14 105930431 105930431 1 + C T COAD 105930429 + 105930409 105930449 41 AAGGCCGGTGTGGTGAACGGCACGGGGGCGCCGGGCCAGAG AAGGCCGGTGTGGTGAACGGCATGGGGGCGCCGGGCCAGAG < 41bp 0.834983849934798 0.62151331782073 0.66405255 0.61358947 prediction 0.426941064228137 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105930429 chr14:105930431 nonsynonymous SNV 0.102 3 23 hm5C_associated_SNPs_86844 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:105930406-105930432
64251 chr7 107546792 107546792 1 + A C PAAD 107546791 + 107546771 107546811 41 AAAGATGGTTGTTATTGGTGCAGGAGTAATAGGTGTAGAAT AAAGATGGTTGTTATTGGTGCCGGAGTAATAGGTGTAGAAT < 41bp 0.713468164302622 0.462249555329745 0.87068707 0.88358104 prediction 0.426936328605244 Functional Loss - DLD ENSG00000091140 CDS Human protein_coding chr7:107546791 chr7:107546792 synonymous SNV . 0 22 hm5C_associated_SNPs_86845 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:107546771-107546808
64251 chr3 148868424 148868424 1 + C T STAD 148868421 + 148868401 148868441 41 TTTCACTGTGCGGTGCAGTGCGGCGGCAGCTCGTGAGGAGG TTTCACTGTGCGGTGCAGTGCGGTGGCAGCTCGTGAGGAGG < 41bp 0.754881259525701 0.541415258257668 0.48556477 0.34602967 prediction 0.426932002536067 Functional Loss - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148868421 chr3:148868424 nonsynonymous SNV 0.080 1 24 hm5C_associated_SNPs_86848 0 0 2 BUD13 POSTAR2 ENCODE chr3:148868338-148868467
64251 chr5 140502219 140502219 1 + G C LUSC 140502218 + 140502198 140502238 41 GTTCAGCTTAACCCTCGTGGCGCTGGATGGTGGGTCACCAC GTTCAGCTTAACCCTCGTGGCCCTGGATGGTGGGTCACCAC < 41bp 0.713457362744331 0.390311856314454 0.28372386 0.061304867 prediction 0.426914725488661 Functional Loss - PCDHB4 ENSG00000081818 CDS Human protein_coding chr5:140502218 chr5:140502219 synonymous SNV . 0 22 hm5C_associated_SNPs_86851 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr5:140502200-140502220
64251 chr16 58550780 58550780 1 + C T UCEC 58550777 + 58550757 58550797 41 CTCCCCCGTGATGGTGCCTGCTGCAGACATACTAAACCACT CTCCCCCGTGATGGTGCCTGCTGTAGACATACTAAACCACT < 41bp 0.713455001196056 0.487857933115264 0.20979345 0.10311586 prediction 0.426910002392113 Functional Loss - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550777 chr16:58550780 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_86856 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:58550760-58550780
64251 chrX 46434225 46434225 1 + C T UCEC 46434223 + 46434203 46434243 41 CCCGAGGGCGGTGCACAACTCGCGCCTCAAGTCTAGGCAGG CCCGAGGGCGGTGCACAACTCGTGCCTCAAGTCTAGGCAGG < 41bp 0.79810530005491 0.584650877748131 0.6365167 0.4964313 prediction 0.426908844613559 Functional Loss - CHST7 ENSG00000147119 CDS Human protein_coding chrX:46434223 chrX:46434225 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_86857 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:46434201-46434233
64251 chr15 91491934 91491934 1 + C T rs35027972 91491931 + 91491911 91491951 41 GTGGCCTCAGCGCTGGTGAACTGCACCAACAGCTATGACTA GTGGCCTCAGCGCTGGTGAACTGTACCAACAGCTATGACTA < 41bp 0.739162279973134 0.525715500062266 0.72124076 0.44975364 prediction 0.426893559821737 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91491931 chr15:91491934 synonymous SNV . 0 24 hm5C_associated_SNPs_86865 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr15:91491914-91491937
64251 chr12 124081898 124081898 1 + C T rs578067164 124081896 + 124081876 124081916 41 GTACCTTAGGACTCAGTCATCTCCACTTAAATTGATGACAC GTACCTTAGGACTCAGTCATCTTCACTTAAATTGATGACAC < 41bp 0.822861230950937 0.60941769589261 0.9016079 0.19558582 prediction 0.426887070116654 Functional Loss - TMED2 ENSG00000086598 UTR3 Human protein_coding chr12:124081896 chr12:124081898 . . 0 23 hm5C_associated_SNPs_86868 0 0 45 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:124081469-124081987
64251 chr3 47361190 47361190 1 + G A UCEC 47361187 + 47361167 47361207 41 CACCGGATTGTCTTAGCAGCCTCGATCCCGTATTTCCATGC CACCGGATTGTCTTAGCAGCCTCAATCCCGTATTTCCATGC < 41bp 0.784407847096446 0.570972106328129 0.41567162 0.31758037 prediction 0.426871481536634 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361187 chr3:47361190 synonymous SNV . 0 24 hm5C_associated_SNPs_86875 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:47361156-47361197
64251 chr7 73933816 73933816 1 + G A HNSC 73933813 + 73933793 73933833 41 CTCCCTGATTCCCAAGGGGTCACGGGACTGTGGCCTGCATG CTCCCTGATTCCCAAGGGGTCACAGGACTGTGGCCTGCATG < 41bp 0.71343259645501 0.458081653981462 0.7159291 0.44432077 prediction 0.426865192910021 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73933813 chr7:73933816 nonsynonymous SNV 0.978 0 24 hm5C_associated_SNPs_86876 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:73933784-73933822
64251 chr1 220298619 220298619 1 + G A HNSC 220298616 + 220298596 220298636 41 TTGTTAAACTAGTGGAACAACACGGCAGTGATATCTGGTGG TTGTTAAACTAGTGGAACAACACAGCAGTGATATCTGGTGG < 41bp 0.786934896143204 0.573502528478553 0.07020837 0.09224039 prediction 0.426864735329302 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220298616 chr1:220298619 nonsynonymous SNV 0.954 3 24 hm5C_associated_SNPs_86877 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:220298575-220298638
64251 chr13 115057234 115057234 1 + G T UCEC 115057232 + 115057212 115057252 41 AAAAAAAAGAGACAGATAAACAGAAGAAAATTGCAGAGAAA AAAAAAAAGAGACAGATAAACATAAGAAAATTGCAGAGAAA < 41bp 0.713430586516163 0.390335065102692 0.8667354 0.2692134 prediction 0.426861173032326 Functional Loss - UPF3A ENSG00000169062 CDS Human protein_coding chr13:115057232 chr13:115057234 nonsynonymous SNV 0.047 0 23 hm5C_associated_SNPs_86878 0 0 11 AGGF1 POSTAR2 ENCODE chr13:115057175-115057281
64251 chr12 28605531 28605531 1 + G A THCA 28605528 + 28605508 28605548 41 AGACAGAACATGCAAAAGATCAAGAAAAAGTATCTCAGGAA AGACAGAACATGCAAAAGATCAAAAAAAAGTATCTCAGGAA < 41bp 0.71343003015502 0.498903911598914 0.86738575 0.5393433 prediction 0.426860060310039 Functional Loss - CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28605528 chr12:28605531 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_86879 0 0 4 CPSF6 POSTAR2 ENCODE chr12:28605455-28605542
64251 chr22 35723351 35723351 1 + G A rs202150969 35723348 + 35723328 35723368 41 TGACGGAGCTGGTGCCCACCCAGGCCGAGCCCGCAGACCTG TGACGGAGCTGGTGCCCACCCAGACCGAGCCCGCAGACCTG < 41bp 0.825211990168135 0.611784633792784 0.89806926 0.41364217 prediction 0.426854712750701 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35723348 chr22:35723351 nonsynonymous SNV 0.976 0 24 hm5C_associated_SNPs_86881 0 0 5 DDX24 POSTAR2 ENCODE chr22:35723293-35723382
64251 chr19 41920016 41920016 1 + C T STAD 41920013 + 41919993 41920033 41 GGCACGCACGTGGGGAGTGCCGCCGCCCTGGACAACACGGA GGCACGCACGTGGGGAGTGCCGCTGCCCTGGACAACACGGA < 41bp 0.736464335741312 0.523039713025453 0.3259518 0.35947406 prediction 0.426849245431718 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41920013 chr19:41920016 synonymous SNV . 0 24 hm5C_associated_SNPs_86882 0 0 1 RPS3 POSTAR2 ENCODE chr19:41920000-41920038
64251 chr1 43827910 43827910 1 + A C CESC 43827909 + 43827889 43827929 41 CCATTACAAGGAGCTCATCTCAGGCCATGGCTTTGCACAGA CCATTACAAGGAGCTCATCTCCGGCCATGGCTTTGCACAGA < 41bp 0.713422249235115 0.444990070996937 0.91014206 0.89804953 prediction 0.42684449847023 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43827909 chr1:43827910 synonymous SNV . 0 22 hm5C_associated_SNPs_86883 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:43827882-43827911
64251 chr15 80415123 80415123 1 + T C rs149918624 80415122 + 80415102 80415142 41 ATCTGTGGACAAAGCAGTACCTGAAACAGAAGATGTGCAGG ATCTGTGGACAAAGCAGTACCCGAAACAGAAGATGTGCAGG < 41bp 0.713417614919824 0.463320174100167 0.24468261 0.2083891 prediction 0.426835229839648 Functional Loss - ZFAND6 ENSG00000086666 CDS Human protein_coding chr15:80415122 chr15:80415123 synonymous SNV . 0 22 hm5C_associated_SNPs_86886 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:80415088-80415124
64251 chr6 35438389 35438389 1 + G A BLCA 35438386 + 35438366 35438406 41 CTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGA CTGGCTGTAGCTGTTGGTCACGTAAAGATGACAGACGATGA < 41bp 0.784258793076128 0.570842313612023 0.4860833 0.21805117 prediction 0.426832958928211 Functional Loss - RPL10A ENSG00000198755 CDS Human protein_coding chr6:35438386 chr6:35438389 synonymous SNV . 0 24 hm5C_associated_SNPs_86888 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:35438380-35438400
64251 chr19 48946536 48946536 1 + C T BLCA 48946534 + 48946514 48946554 41 TCGCCGTCGGACTCGGAGGACTCGGAGAGCCTGGGCGGCGC TCGCCGTCGGACTCGGAGGACTTGGAGAGCCTGGGCGGCGC < 41bp 0.793086134987891 0.579670813306861 0.91269696 0.8956033 prediction 0.426830643362061 Functional Loss - GRIN2D ENSG00000105464 CDS Human protein_coding chr19:48946534 chr19:48946536 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_86891 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:48946510-48946550
64251 chr7 66236964 66236964 1 + C T COAD 66236961 + 66236941 66236981 41 TGCAAGAAAGGATGTGGTTACTACGGCAACCCTGCCTGGCA TGCAAGAAAGGATGTGGTTACTATGGCAACCCTGCCTGGCA < 41bp 0.725733505947228 0.512319495871889 0.29584563 0.20902368 prediction 0.426828020150679 Functional Loss - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66236961 chr7:66236964 synonymous SNV . 0 24 hm5C_associated_SNPs_86892 0 0 2 UCHL5 POSTAR2 ENCODE chr7:66236885-66237009
64251 chr15 75095361 75095361 1 + G A rs116137300 75095358 + 75095338 75095378 41 TGTCCCATGTCCCGTGTCTCCTCGGTCGCCCCGTGTTTGCG TGTCCCATGTCCCGTGTCTCCTCAGTCGCCCCGTGTTTGCG < 41bp 0.741831492332375 0.528417670468262 0.14497593 0.0545983 prediction 0.426827643728227 Functional Loss - CSK ENSG00000103653 UTR3 Human protein_coding chr15:75095358 chr15:75095361 . . 0 24 hm5C_associated_SNPs_86893 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:75095286-75095473
64251 chr1 11716049 11716049 1 + C T HNSC 11716046 + 11716026 11716066 41 CCCTCTGGAAACGCAAGTGCCTGCGAGAGGGCTTCATCACT CCCTCTGGAAACGCAAGTGCCTGTGAGAGGGCTTCATCACT < 41bp 0.71341281647788 0.495084739604811 0.07233685 0.046053946 prediction 0.426825632955761 Functional Loss - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11716046 chr1:11716049 stopgain 0.613 1 24 hm5C_associated_SNPs_86894 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:11716040-11716060
64251 chr2 239356852 239356852 1 + G A rs180793087 239356849 + 239356829 239356869 41 GAGGGCCAGGACAGCCGGGGCTGGGTGCTGCAGGGGCTTCA GAGGGCCAGGACAGCCGGGGCTGAGTGCTGCAGGGGCTTCA < 41bp 0.739212349312406 0.525800312858638 0.707839 0.3704289 prediction 0.426824072907534 Functional Loss - ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239356849 chr2:239356852 . . 0 24 hm5C_associated_SNPs_86896 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:239356851-239356874
64251 chr3 38039115 38039115 1 + C T STAD 38039112 + 38039092 38039132 41 TGGGCCGCAGGGTGGGCAGCCTGCGTGCCGCCACGCCCAGC TGGGCCGCAGGGTGGGCAGCCTGTGTGCCGCCACGCCCAGC < 41bp 0.735051305947316 0.521640233294577 0.23135081 0.117644966 prediction 0.426822145305477 Functional Loss - VILL ENSG00000136059 CDS Human protein_coding chr3:38039112 chr3:38039115 nonsynonymous SNV 0.044 0 24 hm5C_associated_SNPs_86898 0 0 1 ZNF622 POSTAR2 ENCODE chr3:38039085-38039134
64251 chr2 190535246 190535246 1 + C T LUSC 190535244 + 190535224 190535264 41 AAAAGCAAACTTGACTTTACCCCGAGGAATTGGTGAAAAAT AAAAGCAAACTTGACTTTACCCTGAGGAATTGGTGAAAAAT < 41bp 0.713407804794124 0.429479660548766 0.22063497 0.111450195 prediction 0.426815609588248 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190535244 chr2:190535246 stopgain 0.996 1 23 hm5C_associated_SNPs_86900 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:190535204-190535260
64251 chr12 121001191 121001191 1 + G T UCEC 121001188 + 121001168 121001208 41 TCTGCCTTCGATGAAGAAACCACGGAAGTTTGTTCTCTGGA TCTGCCTTCGATGAAGAAACCACTGAAGTTTGTTCTCTGGA < 41bp 0.713405825074229 0.306618975865861 0.20807925 0.06351423 prediction 0.426811650148458 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001188 chr12:121001191 synonymous SNV . 0 24 hm5C_associated_SNPs_86902 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:121001171-121001199
64251 chr12 121001190 121001190 1 + C T UCEC 121001188 + 121001168 121001208 41 TCTGCCTTCGATGAAGAAACCACGGAAGTTTGTTCTCTGGA TCTGCCTTCGATGAAGAAACCATGGAAGTTTGTTCTCTGGA < 41bp 0.713405825074229 0.430472136575369 0.20807925 0.14466962 prediction 0.426811650148458 Functional Loss - RNF10 ENSG00000022840 CDS Human protein_coding chr12:121001188 chr12:121001190 nonsynonymous SNV 0.199 0 23 hm5C_associated_SNPs_86903 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:121001171-121001199
64251 chr1 90048483 90048483 1 + C T LGG 90048480 + 90048460 90048500 41 GGACACCGCTTCCGCTCCCCCTCCGAATTCAGAATGACCTC GGACACCGCTTCCGCTCCCCCTCTGAATTCAGAATGACCTC < 41bp 0.713404002581043 0.487481042207073 0.15728158 0.061391205 prediction 0.426808005162086 Functional Loss - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048480 chr1:90048483 stopgain 0.735 0 24 hm5C_associated_SNPs_86905 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:90048453-90048486
64251 chr19 50548135 50548135 1 + G A UCEC 50548132 + 50548112 50548152 41 GCCACCAACGGGGAAAGTCCCACGGAATGCAAGAGTCATGA GCCACCAACGGGGAAAGTCCCACAGAATGCAAGAGTCATGA < 41bp 0.789943948819459 0.576541968312934 0.33478084 0.112083256 prediction 0.426803961013049 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50548132 chr19:50548135 synonymous SNV . 0 24 hm5C_associated_SNPs_86906 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50548106-50548135
64251 chr7 883097 883097 1 + G T LUSC 883095 + 883075 883115 41 CGAGCGCAAGGACGTGCTCACGGCGCACCCCGCGGCCCCCG CGAGCGCAAGGACGTGCTCACGTCGCACCCCGCGGCCCCCG < 41bp 0.910889536728662 0.697495914201803 0.8963212 0.4087243 prediction 0.426787245053718 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:883095 chr7:883097 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_86912 0 0 1 ZNF622 POSTAR2 ENCODE chr7:883064-883104
64251 chr9 104075208 104075208 1 + G A rs145880799 104075205 + 104075185 104075225 41 TCTGAGTATCGGAACCACTGCTCGGACGTGATTGCTGGTTT TCTGAGTATCGGAACCACTGCTCAGACGTGATTGCTGGTTT < 41bp 0.795251828298422 0.581863510829232 0.37478507 0.24558526 prediction 0.42677663493838 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104075205 chr9:104075208 synonymous SNV . 0 24 hm5C_associated_SNPs_86914 0 0 1 PRPF8 POSTAR2 ENCODE chr9:104075196-104075274
64251 chr7 139107068 139107068 1 + C T STAD 139107066 + 139107046 139107086 41 ACAGGAGGAGCTCTGAAGAGCGCGAAGCAGGGGAGATCTAA ACAGGAGGAGCTCTGAAGAGCGTGAAGCAGGGGAGATCTAA < 41bp 0.851697506890101 0.638309227107475 0.29101378 0.3151071 prediction 0.426776559565251 Functional Loss - C7orf55-LUC7L2;LUC7L2 ENSG00000146963;ENSG00000269955 CDS Human other chr7:139107066 chr7:139107068 synonymous SNV . 0 23 hm5C_associated_SNPs_86915 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:139106896-139107090
64251 chr6 27220668 27220668 1 + C T LUSC 27220666 + 27220646 27220686 41 ACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTG ACAGCTGAGGAGCACAGAACCTTAACTGTCTGGTGTGGGTG < 41bp 0.713387890777642 0.423449391000126 0.18476766 0.20844272 prediction 0.426775781555284 Functional Loss - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27220666 chr6:27220668 stopgain 0.034 0 23 hm5C_associated_SNPs_86917 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:27220658-27220690
64251 chr17 6674069 6674069 1 + G A HNSC 6674066 + 6674046 6674086 41 GCTGCTGAAAATCAAACTTCCACGATGGAGAAAGATGTTCG GCTGCTGAAAATCAAACTTCCACAATGGAGAAAGATGTTCG < 41bp 0.747647186886098 0.534263944772287 0.07762113 0.089231044 prediction 0.426766484227622 Functional Loss - XAF1 ENSG00000132530 CDS Human protein_coding chr17:6674066 chr17:6674069 synonymous SNV . 0 24 hm5C_associated_SNPs_86922 0 0 1 DGCR8 POSTAR2 ENCODE chr17:6674051-6674082
64251 chr17 38610261 38610261 1 + T C UCEC 38610260 + 38610240 38610280 41 AGCCGCACCCACGAGGACCTCTACATCATCCCCATCCCCAA AGCCGCACCCACGAGGACCTCCACATCATCCCCATCCCCAA < 41bp 0.843509771829102 0.630126621424879 0.92049265 0.23346674 prediction 0.426766300808446 Functional Loss - IGFBP4 ENSG00000141753 CDS Human protein_coding chr17:38610260 chr17:38610261 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_86923 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:38610244-38610282
64251 chr9 130925911 130925911 1 + A C rs73672436 130925907 + 130925887 130925927 41 GCCCCTAGGCTCCAAGAGCCCCCAACCGGGACCCAACCCTG GCCCCTAGGCTCCAAGAGCCCCCACCCGGGACCCAACCCTG < 41bp 0.713383092988935 0.326140930266124 0.044891 0.015263736 prediction 0.426766185977869 Functional Loss - C9orf16 ENSG00000171159 UTR3 Human protein_coding chr9:130925907 chr9:130925911 . . 0 25 hm5C_associated_SNPs_86924 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:130925880-130925973
64251 chr4 48343810 48343810 1 + G T UCEC 48343808 + 48343788 48343828 41 ACCAGGAGGTGCGGAAGCTGCAGGAGCTGGTGAAGAAGCTG ACCAGGAGGTGCGGAAGCTGCATGAGCTGGTGAAGAAGCTG < 41bp 0.907873375398691 0.694490628966919 0.7618477 0.40798968 prediction 0.426765492863544 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48343808 chr4:48343810 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_86925 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:48343781-48343816
64251 chr12 7048049 7048049 1 + G T LUAD 7048046 + 7048026 7048066 41 GCTTGGATCCCTTTCCCCGACATGGGGGCCTGGCTCTGCAG GCTTGGATCCCTTTCCCCGACATTGGGGCCTGGCTCTGCAG < 41bp 0.713380518796004 0.306368867374136 0.54738945 0.32926834 prediction 0.426761037592009 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7048046 chr12:7048049 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_86926 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7048031-7048063
64251 chr7 100274372 100274372 1 + C T CESC 100274370 + 100274350 100274390 41 AGATGAGGACCCGGAGGACCCTCCGTGGGCACCTGGCAAAG AGATGAGGACCCGGAGGACCCTTCGTGGGCACCTGGCAAAG < 41bp 0.836076696632991 0.622698335251392 0.7821813 0.38959172 prediction 0.426756722763198 Functional Loss - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100274370 chr7:100274372 synonymous SNV . 0 23 hm5C_associated_SNPs_86927 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:100274320-100274378
64251 chr7 128490876 128490876 1 + G A rs376078394 128490873 + 128490853 128490893 41 GCAGGAGAGGTGCGGATGCCCTCGGGGAAGACGGCACGGCC GCAGGAGAGGTGCGGATGCCCTCAGGGAAGACGGCACGGCC < 41bp 0.788563245542199 0.575186313338567 0.15870714 0.038610518 prediction 0.426753864407263 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128490873 chr7:128490876 synonymous SNV . 0 24 hm5C_associated_SNPs_86929 1 0 4 FMR1 POSTAR2 ENCODE chr7:128490862-128490892
64251 chr3 23963159 23963159 1 + G A rs193020435 23963156 + 23963136 23963176 41 GCTCACTGCAACCTCTGTCTCCCGGGTTTGAGCAATTCTTC GCTCACTGCAACCTCTGTCTCCCAGGTTTGAGCAATTCTTC < 41bp 0.783849887596276 0.570479676959404 0.8012315 0.11942151 prediction 0.426740421273744 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23963156 chr3:23963159 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_86934 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:23963129-23963165
64251 chr19 17449459 17449459 1 + C T UCEC 17449457 + 17449437 17449477 41 GGGCTGGCGGACCTTATCCACGCGGAAACAGAGGCGCAGCG GGGCTGGCGGACCTTATCCACGTGGAAACAGAGGCGCAGCG < 41bp 0.83653714108645 0.623171251017212 0.84649444 0.8117542 prediction 0.426731780138477 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17449457 chr19:17449459 nonsynonymous SNV 0.356 4 23 hm5C_associated_SNPs_86938 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221665 chr19:17449459-17449460
64251 chr1 171482181 171482181 1 + C T CESC 171482179 + 171482159 171482199 41 TCTTGGAAAAGTCGGTATTTCACGGCGTATGCCTCCACCTG TCTTGGAAAAGTCGGTATTTCATGGCGTATGCCTCCACCTG < 41bp 0.713362601612663 0.448141197531407 0.8946456 0.8043883 prediction 0.426725203225326 Functional Loss - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171482179 chr1:171482181 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_86941 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:171482124-171482182
64251 chr2 131103212 131103212 1 + G T BLCA 131103209 + 131103189 131103229 41 ATGAAGTGGGGGCACTGGTGCGAGCCTGCAAAGCCAACGGC ATGAAGTGGGGGCACTGGTGCGATCCTGCAAAGCCAACGGC < 41bp 0.713361049010577 0.305395150861685 0.48448122 0.21560544 prediction 0.426722098021154 Functional Loss - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103209 chr2:131103212 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_86942 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:131103189-131103217
64251 chr7 6647637 6647637 1 + G A STAD 6647634 + 6647614 6647654 41 GTCCCGTGCAGCAGTCGCCTCACGCCGCGCTCCCCCCGGGG GTCCCGTGCAGCAGTCGCCTCACACCGCGCTCCCCCCGGGG < 41bp 0.713357470423143 0.458564046009592 0.14249736 0.09280914 prediction 0.426714940846286 Functional Loss - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6647634 chr7:6647637 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_86946 0 0 1 BUD13 POSTAR2 ENCODE chr7:6647516-6647638
64251 chr5 167943903 167943903 1 + G A LUAD 167943900 + 167943880 167943920 41 TCTTCTCCTTTGACAAAATGCTAGATGACAGAGGAAATACA TCTTCTCCTTTGACAAAATGCTAAATGACAGAGGAAATACA < 41bp 0.742384680896049 0.529029483925251 0.39769173 0.55833465 prediction 0.426710393941597 Functional Loss - RARS ENSG00000113643 CDS Human protein_coding chr5:167943900 chr5:167943903 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_86947 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:167943896-167943907
64251 chr15 90164726 90164726 1 + G A rs201761582 90164723 + 90164703 90164743 41 CCCCTCAGAAAAGGGTTCAGCTCGAATGAAAAAGCGTTCAA CCCCTCAGAAAAGGGTTCAGCTCAAATGAAAAAGCGTTCAA < 41bp 0.792453786722516 0.579104651959927 0.2842341 0.27574983 prediction 0.426698269525179 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90164723 chr15:90164726 nonsynonymous SNV 0.044 0 24 hm5C_associated_SNPs_86953 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90164697-90164741
64251 chr11 9406349 9406349 1 + T C rs4606477 9406348 + 9406328 9406368 41 TATCGAGGCCCTGCGGGGCACTATGGACCCAGCCCTGCGTG TATCGAGGCCCTGCGGGGCACCATGGACCCAGCCCTGCGTG < 41bp 0.732612125628155 0.519266886917353 0.13473105 0.12818855 prediction 0.426690477421603 Functional Loss - IPO7 ENSG00000205339 CDS Human protein_coding chr11:9406348 chr11:9406349 synonymous SNV . 0 22 hm5C_associated_SNPs_86956 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:9406320-9406360
64251 chr1 167365587 167365587 1 + G A BLCA 167365584 + 167365564 167365604 41 CTTCAGCCAAACTACCATCTCTCGATTTGAAGCCTTGAACC CTTCAGCCAAACTACCATCTCTCAATTTGAAGCCTTGAACC < 41bp 0.713344984150009 0.493848190913951 0.384764 0.040367454 prediction 0.426689968300018 Functional Loss - POU2F1 ENSG00000143190 CDS Human protein_coding chr1:167365584 chr1:167365587 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_86957 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:167365538-167365587
64251 chr6 80750370 80750370 1 + G T LUAD 80750367 + 80750347 80750387 41 CTGAAGAAATGAAATATGTTCTGGGCCAACTTGTTGGTCTG CTGAAGAAATGAAATATGTTCTGTGCCAACTTGTTGGTCTG < 41bp 0.713340319774457 0.331836164210886 0.5547472 0.103717506 prediction 0.426680639548914 Functional Loss - TTK ENSG00000112742 CDS Human protein_coding chr6:80750367 chr6:80750370 nonsynonymous SNV 0.972 4 24 hm5C_associated_SNPs_86960 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:80750357-80750378
64251 chrX 47069441 47069441 1 + C T UCEC 47069438 + 47069418 47069458 41 CGACCACAGACCTGGGCTGACTGCGTGACCTGGGCCTGCCA CGACCACAGACCTGGGCTGACTGTGTGACCTGGGCCTGCCA < 41bp 0.749469627349012 0.536130971838722 0.17514715 0.077779114 prediction 0.426677311020578 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47069438 chrX:47069441 synonymous SNV . 0 24 hm5C_associated_SNPs_86961 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chrX:47069419-47069447
64251 chrX 51644761 51644761 1 + G T UCEC 51644758 + 51644738 51644778 41 GGCCGAAGCCCGGGCTGAAGCAAGAACCCGCATGGGAATTG GGCCGAAGCCCGGGCTGAAGCAATAACCCGCATGGGAATTG < 41bp 0.932994430283987 0.719661747369815 0.8164038 0.35840088 prediction 0.426665365828345 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644758 chrX:51644761 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86967 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:51644761-51644814
64251 chr1 76260320 76260320 1 + T C UCEC 76260319 + 76260299 76260339 41 TCAGAGAGTGAATGTTCAGCCTGAGCTAGTGAGCTAGATTC TCAGAGAGTGAATGTTCAGCCCGAGCTAGTGAGCTAGATTC < 41bp 0.724476851668423 0.511150782140343 0.026432633 0.09102562 prediction 0.42665213905616 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76260319 chr1:76260320 synonymous SNV . 0 22 hm5C_associated_SNPs_86974 0 0 43 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:76260186-76260357
64251 chr3 40557460 40557460 1 + G T GBM 40557458 + 40557438 40557478 41 GCCTGCCAGGGAATGTTTCCCAGCACCTTGACTTTGGGAGC GCCTGCCAGGGAATGTTTCCCATCACCTTGACTTTGGGAGC < 41bp 0.898228531969409 0.684906128889862 0.68719923 0.14748436 prediction 0.426644806159095 Functional Loss - ZNF620 ENSG00000177842 CDS Human protein_coding chr3:40557458 chr3:40557460 nonsynonymous SNV 0.066 0 23 hm5C_associated_SNPs_86979 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:40557460-40557480
64251 chr5 137673987 137673987 1 + A C rs373425900 137673983 + 137673963 137674003 41 TCCGGCCGCGGCCCTGGGAGCTGGAGGAACCGCGGTAGGTG TCCGGCCGCGGCCCTGGGAGCTGGCGGAACCGCGGTAGGTG < 41bp 0.921994061088517 0.708672204541231 0.9082567 0.8983494 prediction 0.426643713094572 Functional Loss - CDC25C;FAM53C ENSG00000120709;ENSG00000158402 UTR5 Human other chr5:137673983 chr5:137673987 . . 0 25 hm5C_associated_SNPs_86981 0 0 11 EIF3D POSTAR2 GSE65004,GSM1585671 chr5:137673973-137673994
64251 chr3 51624572 51624572 1 + G A ESCA 51624569 + 51624549 51624589 41 GGGATGATGAAGAAGACCTGCTGGATGGTAAGTGGGCTCTA GGGATGATGAAGAAGACCTGCTGAATGGTAAGTGGGCTCTA < 41bp 0.713318265330525 0.480600740238779 0.4216177 0.2647646 prediction 0.426636530661049 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624569 chr3:51624572 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_86987 0 0 7 BUD13 POSTAR2 ENCODE chr3:51624516-51624578
64251 chr3 51624573 51624573 1 + A T ESCA 51624569 + 51624549 51624589 41 GGGATGATGAAGAAGACCTGCTGGATGGTAAGTGGGCTCTA GGGATGATGAAGAAGACCTGCTGGTTGGTAAGTGGGCTCTA < 41bp 0.713318265330525 0.39212364460002 0.4216177 0.3221104 prediction 0.426636530661049 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624569 chr3:51624573 nonsynonymous SNV 0.987 2 25 hm5C_associated_SNPs_86988 0 0 6 BUD13 POSTAR2 ENCODE chr3:51624516-51624578
64251 chr3 51624571 51624571 1 + G T UCEC 51624569 + 51624549 51624589 41 GGGATGATGAAGAAGACCTGCTGGATGGTAAGTGGGCTCTA GGGATGATGAAGAAGACCTGCTTGATGGTAAGTGGGCTCTA < 41bp 0.713318265330525 0.379793899176182 0.4216177 0.27545708 prediction 0.426636530661049 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51624569 chr3:51624571 synonymous SNV . 0 23 hm5C_associated_SNPs_86989 0 0 7 BUD13 POSTAR2 ENCODE chr3:51624516-51624578
64251 chr16 2284258 2284258 1 + G A SKCM 2284255 + 2284235 2284275 41 AGCACCAGGAGGTGCACGTGCGTGAGCGCCGCTTCCGCTGT AGCACCAGGAGGTGCACGTGCGTAAGCGCCGCTTCCGCTGT < 41bp 0.811573700167584 0.598259717980616 0.5013132 0.42447785 prediction 0.426627964373936 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284255 chr16:2284258 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_86993 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:2284240-2284260
64251 chr4 1206124 1206124 1 - G A LUAD 1206126 - 1206106 1206146 41 CCAGCGCCATGTCCCTGTCCCACGGCCTGCCCCCTGTGGCC CCAGCGCCATGTCCCTGTCCCATGGCCTGCCCCCTGTGGCC < 41bp 0.793820952311369 0.580507398188433 0.25565076 0.4720872 prediction 0.426627108245873 Functional Loss - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206126 chr4:1206124 synonymous SNV . 0 23 hm5C_associated_SNPs_86994 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1206111-1206142
64251 chr1 107600083 107600083 1 + G A LUSC 107600080 + 107600060 107600100 41 GTCCGGCGAGGACGTGCTGGCCCGGCCGCAGCGCTTTGCTC GTCCGGCGAGGACGTGCTGGCCCAGCCGCAGCGCTTTGCTC < 41bp 0.713313311561822 0.467811498740888 0.4923097 0.1974285 prediction 0.426626623123644 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600080 chr1:107600083 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_86995 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:107600067-107600090
64251 chr17 47866205 47866205 1 + A C rs138591805 47866201 + 47866181 47866221 41 GCCGCAGCCGCCGGCAATGCCGCGAAGGAAGGTGAGAAACG GCCGCAGCCGCCGGCAATGCCGCGCAGGAAGGTGAGAAACG < 41bp 0.931825797955857 0.71852214597963 0.8283959 0.37936756 prediction 0.426607303952454 Functional Loss - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47866201 chr17:47866205 synonymous SNV . 0 25 hm5C_associated_SNPs_86997 0 0 3 DDX3X POSTAR2 ENCODE chr17:47866049-47866212
64251 chr3 184063817 184063817 1 + G A rs569263762 184063814 + 184063794 184063834 41 CCAGCCAGGGTGTTAATGCCCACGTAGTGGAGGCCTCTGGC CCAGCCAGGGTGTTAATGCCCACATAGTGGAGGCCTCTGGC < 41bp 0.745308899602583 0.532005557626077 0.06371182 0.06646186 prediction 0.426606683953012 Functional Loss - FAM131A ENSG00000175182 UTR3 Human protein_coding chr3:184063814 chr3:184063817 . . 0 24 hm5C_associated_SNPs_86998 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:184063817-184063818
64251 chr7 116830898 116830898 1 + G A OV 116830895 + 116830875 116830915 41 TTCTGCTTTTCAGATTCTCTCCTGAGGCTGCATCTCGGCGG TTCTGCTTTTCAGATTCTCTCCTAAGGCTGCATCTCGGCGG < 41bp 0.713300051194612 0.466708183504337 0.56175643 0.23018014 prediction 0.426600102389224 Functional Loss - ST7 ENSG00000004866 CDS Human protein_coding chr7:116830895 chr7:116830898 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_86999 0 0 2 BUD13 POSTAR2 ENCODE chr7:116830882-116830945
64251 chr7 116830899 116830899 1 + A T UCEC 116830895 + 116830875 116830915 41 TTCTGCTTTTCAGATTCTCTCCTGAGGCTGCATCTCGGCGG TTCTGCTTTTCAGATTCTCTCCTGTGGCTGCATCTCGGCGG < 41bp 0.713300051194612 0.394323541744958 0.56175643 0.31449205 prediction 0.426600102389224 Functional Loss - ST7 ENSG00000004866 CDS Human protein_coding chr7:116830895 chr7:116830899 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_87000 0 0 2 BUD13 POSTAR2 ENCODE chr7:116830882-116830945
64251 chr16 844186 844186 1 + C T rs549561799 844184 + 844164 844204 41 CCGCTGCCTCTGCGGGCGAGCACGAGAAGGTGGTCCAGGTA CCGCTGCCTCTGCGGGCGAGCATGAGAAGGTGGTCCAGGTA < 41bp 0.836712685765938 0.623418733955758 0.89586914 0.85411423 prediction 0.426587903620361 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:844184 chr16:844186 synonymous SNV . 0 23 hm5C_associated_SNPs_87002 0 0 2 PPIG POSTAR2 ENCODE chr16:844157-844192
64251 chr2 24881562 24881562 1 + G T LIHC 24881558 + 24881538 24881578 41 TTTTTCAACATGAGTGGCCTCGGGGACAGTTCATCCGACCC TTTTTCAACATGAGTGGCCTCGGGTACAGTTCATCCGACCC < 41bp 0.733445690798173 0.520155359584448 0.90559 0.59892625 prediction 0.42658066242745 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24881558 chr2:24881562 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_87003 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:24881537-24881566
64251 chr3 159713467 159713467 1 + G A rs568408 159713464 + 159713444 159713484 41 GGATGGGACTATTACATCCACATGATACCTCTGATCAAGTA GGATGGGACTATTACATCCACATAATACCTCTGATCAAGTA < 41bp 0.716824274929359 0.503535499417673 0.11730701 0.0713335 prediction 0.426577551023372 Functional Loss - IL12A-AS1 ENSG00000244040 ncRNA_intronic Human antisense chr3:159713464 chr3:159713467 . . 0 24 hm5C_associated_SNPs_87004 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:159713441-159713467
64251 chr6 7231301 7231301 1 + A T READ 7231297 + 7231277 7231317 41 CTTTGGGGCCCAGCGGAATCCTGGAAAGCCCCATGGCCCCT CTTTGGGGCCCAGCGGAATCCTGGTAAGCCCCATGGCCCCT < 41bp 0.858917508574618 0.645629465770499 0.904302 0.9053939 prediction 0.426576085608238 Functional Loss - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7231297 chr6:7231301 nonsynonymous SNV 0.035 1 25 hm5C_associated_SNPs_87005 0 0 3 RBM15 POSTAR2 ENCODE chr6:7231298-7231322
64251 chr19 12918303 12918303 1 + G A STAD 12918300 + 12918280 12918320 41 TTATACAGTATGCATTGGACCAGGGCGTGAACGTCACCCAG TTATACAGTATGCATTGGACCAGAGCGTGAACGTCACCCAG < 41bp 0.804015294768583 0.590727447976173 0.7647004 0.27848303 prediction 0.426575693584821 Functional Loss - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12918300 chr19:12918303 nonsynonymous SNV 0.810 3 24 hm5C_associated_SNPs_87006 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12918239-12918312
64251 chr1 10473274 10473274 1 + C T SKCM 10473271 + 10473251 10473291 41 ACAGGGAAGTGGACCGCCATCTCCGCCCTGGAATACGGCGT ACAGGGAAGTGGACCGCCATCTCTGCCCTGGAATACGGCGT < 41bp 0.772715151225968 0.559433853261037 0.32409748 0.14564314 prediction 0.426562595929862 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10473271 chr1:10473274 synonymous SNV . 0 24 hm5C_associated_SNPs_87009 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:10473217-10473283
64251 chr5 122848120 122848120 1 + C T rs555620874 122848118 + 122848098 122848138 41 CCCCCTACCTCGCTCGCTCGCTCGCTCGCTCCCTGCGTGGC CCCCCTACCTCGCTCGCTCGCTTGCTCGCTCCCTGCGTGGC < 41bp 0.718233282665414 0.504952056171068 0.28744686 0.275819 prediction 0.426562452988692 Functional Loss - CSNK1G3 ENSG00000151292 UTR5 Human protein_coding chr5:122848118 chr5:122848120 . . 0 23 hm5C_associated_SNPs_87010 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:122848090-122848131
64251 chr3 143691330 143691330 1 + C T HNSC 143691328 + 143691308 143691348 41 CCGACCGGCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTGC CCGACCGGCGCTTCCTGCAGCTTAATAAGTGCCCGGCGTGC < 41bp 0.839509826687146 0.626237082444886 0.23485002 0.081777364 prediction 0.426545488484521 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691328 chr3:143691330 synonymous SNV . 0 23 hm5C_associated_SNPs_87014 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:143691303-143691330
64251 chr4 128724902 128724902 1 + G A HNSC 128724899 + 128724879 128724919 41 GATAAATGTGAAAGAAAACTCTCGGGCCTTGTTGCGTTTAT GATAAATGTGAAAGAAAACTCTCAGGCCTTGTTGCGTTTAT < 41bp 0.72058605338223 0.507314139088173 0.21641183 0.15341869 prediction 0.426543828588114 Functional Loss - HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128724899 chr4:128724902 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87015 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:128724875-128724907
64251 chr10 101514311 101514311 1 + A T LUAD 101514309 + 101514289 101514329 41 GTGGTATAACAGACAGAAATCTACAAAGGATCCTTGAGGGT GTGGTATAACAGACAGAAATCTTCAAAGGATCCTTGAGGGT < 41bp 0.713268690881998 0.4994849161036 0.89679885 0.61488444 prediction 0.426537381763995 Functional Loss - CUTC ENSG00000119929 CDS Human protein_coding chr10:101514309 chr10:101514311 synonymous SNV . 0 23 hm5C_associated_SNPs_87016 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr10:101514302-101514323
64251 chr16 2607963 2607963 1 + C T UCEC 2607961 + 2607941 2607981 41 CTTGGGGAAGGCTCTTTTTCCACGGTGAGTATTTGCTGCTG CTTGGGGAAGGCTCTTTTTCCATGGTGAGTATTTGCTGCTG < 41bp 0.827515984174479 0.614250251409833 0.8744181 0.7210989 prediction 0.426531465529293 Functional Loss - PDPK1 ENSG00000140992 CDS Human protein_coding chr16:2607961 chr16:2607963 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_87018 0 0 1 BUD13 POSTAR2 ENCODE chr16:2607923-2607971
64251 chr10 114182166 114182166 1 + G T SARC 114182163 + 114182143 114182183 41 GAAGCCCTGGACAGTGATGGCTGGCTTCACACAGGAGACAT GAAGCCCTGGACAGTGATGGCTGTCTTCACACAGGAGACAT < 41bp 0.713264612481442 0.316781800234309 0.27374968 0.08249426 prediction 0.426529224962884 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114182163 chr10:114182166 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87019 0 0 1 SND1 POSTAR2 ENCODE chr10:114182119-114182179
64251 chr1 155720142 155720142 1 + G A rs189817490 155720139 + 155720119 155720159 41 GAAAGGAGCTGAACTCCACTCTCGATGCTATTTACAGAGGA GAAAGGAGCTGAACTCCACTCTCAATGCTATTTACAGAGGA < 41bp 0.751987194997734 0.538728149119638 0.939124 0.6890961 prediction 0.426518091756193 Functional Loss - MSTO2P ENSG00000116580 UTR3 Human protein_coding chr1:155720139 chr1:155720142 . . 0 24 hm5C_associated_SNPs_87023 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:155720130-155720162
64251 chr4 57340270 57340270 1 + C T LGG 57340268 + 57340248 57340288 41 GCTTAGCAGTGTATAGAGATCTCGTCCGAAACTCCCAAGAT GCTTAGCAGTGTATAGAGATCTTGTCCGAAACTCCCAAGAT < 41bp 0.713250381620099 0.425974808693747 0.04905781 0.047386646 prediction 0.426500763240197 Functional Loss - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340268 chr4:57340270 synonymous SNV . 0 23 hm5C_associated_SNPs_87029 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:57340229-57340321
64251 chr4 57340271 57340271 1 + G A STAD 57340268 + 57340248 57340288 41 GCTTAGCAGTGTATAGAGATCTCGTCCGAAACTCCCAAGAT GCTTAGCAGTGTATAGAGATCTCATCCGAAACTCCCAAGAT < 41bp 0.713250381620099 0.484451014538465 0.04905781 0.039025605 prediction 0.426500763240197 Functional Loss - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340268 chr4:57340271 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_87030 1 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:57340229-57340321
64251 chr15 91328268 91328268 1 + G T SARC 91328266 + 91328246 91328286 41 GCTGGCCTCAGTGATTCTGCCAGAGATGAAGTGCAGCAGAA GCTGGCCTCAGTGATTCTGCCATAGATGAAGTGCAGCAGAA < 41bp 0.713246723799056 0.360753274946179 0.7889064 0.28939933 prediction 0.426493447598111 Functional Loss - BLM ENSG00000197299 CDS Human protein_coding chr15:91328266 chr15:91328268 nonsynonymous SNV 0.984 5 23 hm5C_associated_SNPs_87031 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91328236-91328269
64251 chr6 27778118 27778118 1 + G A rs147444683 27778115 + 27778095 27778135 41 GACTTGCGCTTCCAGAGCTCCGCGGTGATGGCGCTGCAAGA GACTTGCGCTTCCAGAGCTCCGCAGTGATGGCGCTGCAAGA < 41bp 0.792179230367413 0.578933002257558 0.40097028 0.18556431 prediction 0.426492456219709 Functional Loss - HIST1H3H ENSG00000203813 CDS Human other chr6:27778115 chr6:27778118 synonymous SNV . 0 24 hm5C_associated_SNPs_87032 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr20 39713125 39713125 1 + G T UCEC 39713122 + 39713102 39713142 41 GATGGTAAATTGAAAAAACCCAAGAATAAAGATAAAGATAA GATGGTAAATTGAAAAAACCCAATAATAAAGATAAAGATAA < 41bp 0.713244054793829 0.348619065131116 0.38460946 0.8757106 prediction 0.426488109587658 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39713122 chr20:39713125 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87034 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003587 chr20:39713100-39713140
64251 chr1 162351912 162351912 1 + T C LIHC 162351911 + 162351891 162351931 41 GGAGAAAGGAGCCCTCCAGCCTGGGCAGTGTGGGTGTGACA GGAGAAAGGAGCCCTCCAGCCCGGGCAGTGTGGGTGTGACA < 41bp 0.753241710845612 0.539998483546064 0.3339121 0.4821529 prediction 0.426486454599097 Functional Loss - C1orf226 ENSG00000239887 CDS Human protein_coding chr1:162351911 chr1:162351912 nonsynonymous SNV 0.665 0 22 hm5C_associated_SNPs_87035 0 0 1 PPIG POSTAR2 ENCODE chr1:162351903-162352002
64251 chr12 14577467 14577467 1 + T C SKCM 14577466 + 14577446 14577486 41 CTCCTCTGGTGATCCCACCTCTAGTGATCCCATCCCAGGTG CTCCTCTGGTGATCCCACCTCCAGTGATCCCATCCCAGGTG < 41bp 0.71324195963781 0.471120249785503 0.37932912 0.3528935 prediction 0.42648391927562 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577466 chr12:14577467 synonymous SNV . 0 22 hm5C_associated_SNPs_87036 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14577351-14577468
64251 chrX 46938006 46938006 1 + C T rs5906321 46938004 + 46937984 46938024 41 TGCGCCAGGGAGGAGGCAGGCTCAACCTTCAGATTCCCAGG TGCGCCAGGGAGGAGGCAGGCTTAACCTTCAGATTCCCAGG < 41bp 0.783328283308145 0.570088948187634 0.40561205 0.45317084 prediction 0.426478670241021 Functional Loss - RGN ENSG00000130988 UTR5 Human protein_coding chrX:46938004 chrX:46938006 . . 0 23 hm5C_associated_SNPs_87037 0 0 1 DDX3X POSTAR2 ENCODE chrX:46937866-46938012
64251 chr12 54676370 54676370 1 + T C rs565686892 54676369 + 54676349 54676389 41 GTCTTAAGGTCGAAGTGGTTCTGGAAACTTTGGTGGTGGTC GTCTTAAGGTCGAAGTGGTTCCGGAAACTTTGGTGGTGGTC < 41bp 0.809396272359918 0.596166806977295 0.3890604 0.8526284 prediction 0.426458930765247 Functional Loss - HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54676369 chr12:54676370 synonymous SNV . 0 22 hm5C_associated_SNPs_87043 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr12:54676344-54676371
64251 chr1 121129791 121129791 1 + G A PRAD 121129788 + 121129768 121129808 41 CTTGTTAAGTGTCTGAAGGACAGGCATTGAATATCTTAGAT CTTGTTAAGTGTCTGAAGGACAGACATTGAATATCTTAGAT < 41bp 0.720675632221516 0.507450419744172 0.19938672 0.07718602 prediction 0.426450424954688 Functional Loss - SRGAP2D ENSG00000171943;ENSG00000230806 ncRNA_intronic Human other chr1:121129788 chr1:121129791 . . 0 24 hm5C_associated_SNPs_87045 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:121129776-121129796
64251 chr10 126523504 126523504 1 + C T rs541113579 126523501 + 126523481 126523521 41 TCTCGACCCATGGCACATCCCGACGAGGACCCCAGGAACAC TCTCGACCCATGGCACATCCCGATGAGGACCCCAGGAACAC < 41bp 0.720655138228895 0.507431676338196 0.40623772 0.2273502 prediction 0.426446923781397 Functional Loss - ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126523501 chr10:126523504 synonymous SNV . 0 24 hm5C_associated_SNPs_87048 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:126523490-126523511
64251 chr15 72766683 72766683 1 + A C rs187106179 72766682 + 72766662 72766702 41 TGTTGGCTCAGTAGCGATAGCAGCGGCCGTGGAGGTGGCGT TGTTGGCTCAGTAGCGATAGCCGCGGCCGTGGAGGTGGCGT < 41bp 0.79725943297715 0.584036700011573 0.8038172 0.8222146 prediction 0.426445465931155 Functional Loss - ARIH1 ENSG00000261423 ncRNA_exonic Human lincRNA chr15:72766682 chr15:72766683 . . 0 22 hm5C_associated_SNPs_87049 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:72766680-72766700
64251 chr20 42695404 42695404 1 + C T rs149010935 42695402 + 42695382 42695422 41 ATCTCTGAGTTCCCCAGCAGCTCGGGATCCTGCTCACCTGG ATCTCTGAGTTCCCCAGCAGCTTGGGATCCTGCTCACCTGG < 41bp 0.853474476724812 0.640253999004081 0.48164755 0.27575326 prediction 0.426440955441463 Functional Loss - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695402 chr20:42695404 nonsynonymous SNV 0.573 0 23 hm5C_associated_SNPs_87050 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr18 32398234 32398234 1 + G T LUAD 32398231 + 32398211 32398251 41 CAGCTCTGTCAGGACTGCTTCTGGAGGGGACATGCCGGTGG CAGCTCTGTCAGGACTGCTTCTGTAGGGGACATGCCGGTGG < 41bp 0.888032862050517 0.674812932985135 0.80832183 0.37259388 prediction 0.426439858130765 Functional Loss - DTNA ENSG00000134769 CDS Human protein_coding chr18:32398231 chr18:32398234 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_87051 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:32398205-32398234
64251 chr19 45561150 45561150 1 + G A LUAD 45561147 + 45561127 45561167 41 CGGACGAAGATGAGGTCATCCCCGACATCGGTGGGGTCCCC CGGACGAAGATGAGGTCATCCCCAACATCGGTGGGGTCCCC < 41bp 0.788714289152886 0.575494362068133 0.20226002 0.7258421 prediction 0.426439854169505 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45561147 chr19:45561150 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_87052 0 0 6 BUD13 POSTAR2 ENCODE chr19:45561102-45561155
64251 chr16 54967423 54967423 1 + G A COAD 54967420 + 54967400 54967440 41 GCTCTCCATGCCCACCGTGTCCCGGGCCCATAGCCGGGCAA GCTCTCCATGCCCACCGTGTCCCAGGCCCATAGCCGGGCAA < 41bp 0.810495157233319 0.597277610591465 0.3708739 0.113713175 prediction 0.42643509328371 Functional Loss - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967420 chr16:54967423 nonsynonymous SNV 0.601 1 24 hm5C_associated_SNPs_87053 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:54967396-54967432
64251 chr19 8436198 8436198 1 + G T SARC 8436196 + 8436176 8436216 41 ACAGCCGCCTGGCCGTGCAGCTGCGGGACTGGGATGGCAAC ACAGCCGCCTGGCCGTGCAGCTTCGGGACTGGGATGGCAAC < 41bp 0.713217420660936 0.350787795893916 0.30907878 0.110331506 prediction 0.426434841321872 Functional Loss - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436196 chr19:8436198 synonymous SNV . 0 23 hm5C_associated_SNPs_87054 0 0 1 SND1 POSTAR2 ENCODE chr19:8436131-8436286
64251 chr7 5269291 5269291 1 + G A rs147945082 5269288 + 5269268 5269308 41 AGATCTTGGACTCTGCCTCTCACGACTGCCCCTTAGTCACT AGATCTTGGACTCTGCCTCTCACAACTGCCCCTTAGTCACT < 41bp 0.808986718019094 0.595773005607797 0.08723536 0.05736205 prediction 0.426427424822596 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269288 chr7:5269291 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_87058 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:5269282-5269303
64251 chr22 41923306 41923306 1 + G A STAD 41923303 + 41923283 41923323 41 GCCTGACAGAAACATGGCATCAGGTGGGTGGTGATCGGAGA GCCTGACAGAAACATGGCATCAGATGGGTGGTGATCGGAGA < 41bp 0.713212702309143 0.47602068184438 0.8350016 0.7811114 prediction 0.426425404618285 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41923303 chr22:41923306 synonymous SNV . 0 24 hm5C_associated_SNPs_87059 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:41923299-41923327
64251 chr1 10221342 10221342 1 + C T KIRC 10221340 + 10221320 10221360 41 AGAACAGTGGGACCAGTTGCCCCGGGTGAGGACGTGGTCCA AGAACAGTGGGACCAGTTGCCCTGGGTGAGGACGTGGTCCA < 41bp 0.71321199433796 0.438758292703553 0.4083331 0.4513175 prediction 0.42642398867592 Functional Loss - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10221340 chr1:10221342 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_87063 0 0 2 BUD13 POSTAR2 ENCODE chr1:10221295-10221390
64251 chr8 28575124 28575124 1 + G A COAD 28575121 + 28575101 28575141 41 AGGCGGCAAGGCCGCTTTCTCTGGGAGACTTACTTCTCCAC AGGCGGCAAGGCCGCTTTCTCTGAGAGACTTACTTCTCCAC < 41bp 0.811506163610712 0.598299892086269 0.9425571 0.9059485 prediction 0.426412543048888 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575121 chr8:28575124 stopgain 1.000 1 24 hm5C_associated_SNPs_87065 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:28575110-28575142
64251 chr4 119552217 119552217 1 + C T rs141391712 119552215 + 119552195 119552235 41 TCTACATCCAGCTCATGCCTCACGGTGACCTCTCCAGGCAC TCTACATCCAGCTCATGCCTCATGGTGACCTCTCCAGGCAC < 41bp 0.755196715423844 0.54199138776839 0.34589162 0.26000053 prediction 0.426410655310909 Functional Loss - LOC729218 ENSG00000260404 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr4:119552215 chr4:119552217 . . 0 23 hm5C_associated_SNPs_87066 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1378377 chr4:119552180-119552220
64251 chrX 54466893 54466893 1 + G T LUAD 54466891 + 54466871 54466911 41 AAGATGCGCGAGCTCTTTTCCGGGCTGGGGTCTGCGCGGCC AAGATGCGCGAGCTCTTTTCCGTGCTGGGGTCTGCGCGGCC < 41bp 0.909932713428785 0.696740037301915 0.93163633 0.8558465 prediction 0.42638535225374 Functional Loss - TSR2 ENSG00000158526 CDS Human protein_coding chrX:54466891 chrX:54466893 synonymous SNV . 0 23 hm5C_associated_SNPs_87074 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54466873-54466904
64251 chr22 29694857 29694857 1 + C T LGG 29694854 + 29694834 29694874 41 CTGGAGGAGGAAACGTCCAGCACCGAGCTGGAGACTGGCAG CTGGAGGAGGAAACGTCCAGCACTGAGCTGGAGACTGGCAG < 41bp 0.749488869122477 0.536298276620175 0.30535716 0.25579488 prediction 0.426381185004603 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29694854 chr22:29694857 stopgain 1.000 0 24 hm5C_associated_SNPs_87079 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:29694760-29694860
64251 chr17 78201686 78201686 1 + C T rs61011315 78201684 + 78201664 78201704 41 TGCTGAAGCTGATGCGGGACCACGTGCCTCCCGTCCACCCC TGCTGAAGCTGATGCGGGACCATGTGCCTCCCGTCCACCCC < 41bp 0.829244859959148 0.616056370517948 0.31943226 0.2608729 prediction 0.426376978882399 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201684 chr17:78201686 synonymous SNV . 0 23 hm5C_associated_SNPs_87081 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78201639-78201748
64251 chrX 56755736 56755736 1 + G T SARC 56755732 + 56755712 56755752 41 CTCGCCGCCATCTCAGGTCTCTTGGCTTTGCCAGGGCCCAC CTCGCCGCCATCTCAGGTCTCTTGTCTTTGCCAGGGCCCAC < 41bp 0.713188313401724 0.49863730941615 0.5119005 0.34552965 prediction 0.426376626803449 Functional Loss - NBDY ENSG00000204272 ncRNA_exonic Human protein_coding chrX:56755732 chrX:56755736 . . 0 25 hm5C_associated_SNPs_87082 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:56755680-56755760
64251 chr21 45738399 45738399 1 + C T rs368709851 45738397 + 45738377 45738417 41 GTGATGGCGCTGCTGGAAGCCACGCCTGACACGCCGGCCTG GTGATGGCGCTGCTGGAAGCCATGCCTGACACGCCGGCCTG < 41bp 0.713182778083461 0.463895306190922 0.6631024 0.62084234 prediction 0.426365556166922 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45738397 chr21:45738399 nonsynonymous SNV 0.370 5 23 hm5C_associated_SNPs_87086 0 0 9 DDX24 POSTAR2 ENCODE chr21:45738358-45738421
64251 chr19 19309482 19309482 1 + T C UCEC 19309481 + 19309461 19309501 41 GACAGAATGGAGGGACGCCACTGCTGTACGCTGTGCGCGGG GACAGAATGGAGGGACGCCACCGCTGTACGCTGTGCGCGGG < 41bp 0.821518962486268 0.608339711353101 0.26674557 0.2387636 prediction 0.426358502266333 Functional Loss - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19309481 chr19:19309482 nonsynonymous SNV 0.821 4 22 hm5C_associated_SNPs_87089 0 0 10 BUD13 POSTAR2 ENCODE chr19:19309469-19309535
64251 chr6 109169655 109169655 1 + G A rs191143068 109169652 + 109169632 109169672 41 GAGCGGCGTCGTGGGGTTACCCCGCCCGCGCCAGCGCTGCA GAGCGGCGTCGTGGGGTTACCCCACCCGCGCCAGCGCTGCA < 41bp 0.770607863047004 0.557437063491643 0.39638165 0.7595048 prediction 0.426341599110723 Functional Loss - ARMC2 ENSG00000118690 UTR5 Human protein_coding chr6:109169652 chr6:109169655 . . 0 24 hm5C_associated_SNPs_87097 0 0 1 DDX3X POSTAR2 ENCODE chr6:109169645-109169720
64251 chr8 20054971 20054971 1 + C T ESCA 20054969 + 20054949 20054989 41 ACGGGGCCGCACCCGAGCTACCCGTGCCCACCGGTGGGCCG ACGGGGCCGCACCCGAGCTACCTGTGCCCACCGGTGGGCCG < 41bp 0.71316569453225 0.478046958611748 0.21450764 0.10765219 prediction 0.4263313890645 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20054969 chr8:20054971 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_87101 0 0 6 DDX3X POSTAR2 ENCODE chr8:20054935-20054986
64251 chr3 133467339 133467339 1 + G A COAD 133467336 + 133467316 133467356 41 CCACTAAGTGCCAGAGTTTCCGCGACCATATGAAAAGCGTC CCACTAAGTGCCAGAGTTTCCGCAACCATATGAAAAGCGTC < 41bp 0.798539509942517 0.585376898128665 0.20415458 0.1130085 prediction 0.426325223627704 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133467336 chr3:133467339 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_87102 0 0 7 FUS POSTAR2 GSE40653,GSM998875 chr3:133467320-133467400
64251 chr5 169494645 169494645 1 + G A SKCM 169494642 + 169494622 169494662 41 CCACTCTCCATGCTCCTGAACGGGATTGTGGACCCTGCTGT CCACTCTCCATGCTCCTGAACGGAATTGTGGACCCTGCTGT < 41bp 0.787265658563593 0.574103669455034 0.9306514 0.8242545 prediction 0.426323978217118 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169494642 chr5:169494645 synonymous SNV . 0 24 hm5C_associated_SNPs_87103 0 0 2 FXR1 POSTAR2 ENCODE chr5:169494569-169494692
64251 chr2 70315551 70315551 1 + G A COAD 70315548 + 70315528 70315568 41 CTCTAGATGCCTACTCGATTCAAGGACAACACACCATTTCT CTCTAGATGCCTACTCGATTCAAAGACAACACACCATTTCT < 41bp 0.789609963714945 0.576451712362808 0.12554061 0.03076303 prediction 0.426316502704273 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315548 chr2:70315551 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_87105 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70315487-70315585
64251 chr1 206566186 206566186 1 + C T BLCA 206566183 + 206566163 206566203 41 CAGACCCCACGCTCCCCTGACTCCACGGCCAACGTTCGCAT CAGACCCCACGCTCCCCTGACTCTACGGCCAACGTTCGCAT < 41bp 0.713153779309241 0.46943356508973 0.94483864 0.92382324 prediction 0.426307558618482 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566183 chr1:206566186 synonymous SNV . 0 24 hm5C_associated_SNPs_87108 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206566170-206566192
64251 chr7 16823094 16823094 1 + C T UCEC 16823092 + 16823072 16823112 41 AGGAACCAGAAAGACCCCCGCGCGAATCCTAGTGCATTCCT AGGAACCAGAAAGACCCCCGCGTGAATCCTAGTGCATTCCT < 41bp 0.851479654400773 0.638326525167541 0.47235855 0.46310335 prediction 0.426306258466463 Functional Loss - TSPAN13 ENSG00000106537 CDS Human protein_coding chr7:16823092 chr7:16823094 nonsynonymous SNV 0.925 2 23 hm5C_associated_SNPs_87109 0 0 2 U2AF2 POSTAR2 ENCODE chr7:16823026-16823106
64251 chr7 6655626 6655626 1 + G C rs11762851 6655625 + 6655605 6655645 41 CCCTTGGCCCAGGGCGACCTCGGCAGCCCAGAGGGCGTGGA CCCTTGGCCCAGGGCGACCTCCGCAGCCCAGAGGGCGTGGA < 41bp 0.866135768570082 0.65298370190654 0.6753301 0.16950151 prediction 0.426304133327084 Functional Loss - ZNF853 ENSG00000236609 UTR5 Human protein_coding chr7:6655625 chr7:6655626 . . 0 22 hm5C_associated_SNPs_87110 0 0 1 DDX3X POSTAR2 ENCODE chr7:6655598-6655669
64251 chr8 91953091 91953091 1 + C T UCEC 91953088 + 91953068 91953108 41 TTCCAGCTCGCTCTGAAACACTACGTGGAGAGTGCTTCCTC TTCCAGCTCGCTCTGAAACACTATGTGGAGAGTGCTTCCTC < 41bp 0.750270845213786 0.537122603467152 0.116772026 0.1548126 prediction 0.426296483493267 Functional Loss - NECAB1 ENSG00000123119 CDS Human protein_coding chr8:91953088 chr8:91953091 synonymous SNV . 0 24 hm5C_associated_SNPs_87114 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:91953080-91953100
64251 chr6 116600810 116600810 1 - G A rs3828743 116600812 - 116600792 116600832 41 GGAGACCGTCGCGCTCCCGCCTCCACCGCCTTCAGAGGAGG GGAGACCGTCGCGCTCCCGCCTTCACCGCCTTCAGAGGAGG < 41bp 0.807117586042139 0.593974776795454 0.939553 0.26190418 prediction 0.426285618493369 Functional Loss - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600812 chr6:116600810 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_87117 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:116600784-116600822
64251 chr9 124064369 124064369 1 + G A LUSC 124064366 + 124064346 124064386 41 AACCTTTATGGAGACTTCTTCACGGGCGACGCCTACGTCAT AACCTTTATGGAGACTTCTTCACAGGCGACGCCTACGTCAT < 41bp 0.789384921396631 0.576249617653576 0.9225242 0.6961839 prediction 0.426270607486109 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124064366 chr9:124064369 synonymous SNV . 0 24 hm5C_associated_SNPs_87121 0 0 7 DDX3X POSTAR2 ENCODE chr9:124064316-124064394
64251 chr2 113346443 113346443 1 + G A LGG 113346440 + 113346420 113346460 41 ATGTTGATGTACTTTCTCCACAGGCACAGCCACTTCCTGCC ATGTTGATGTACTTTCTCCACAGACACAGCCACTTCCTGCC < 41bp 0.713134272566713 0.494651150540125 0.062411964 0.024820179 prediction 0.426268545133425 Functional Loss - CHCHD5 ENSG00000125611 CDS Human protein_coding chr2:113346440 chr2:113346443 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_87123 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr2:113346443-113346444
64251 chr20 46277852 46277852 1 + A C LIHC 46277851 + 46277831 46277871 41 TGCAGCCCCAGGTGAGCTCCCAGGTGAGGATGATAAGCCTC TGCAGCCCCAGGTGAGCTCCCCGGTGAGGATGATAAGCCTC < 41bp 0.713134203795666 0.438878496841098 0.9078289 0.7326397 prediction 0.426268407591331 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46277851 chr20:46277852 nonsynonymous SNV 0.587 1 22 hm5C_associated_SNPs_87125 0 0 6 BUD13 POSTAR2 ENCODE chr20:46277804-46277872
64251 chr19 21301038 21301038 1 + C T CESC 21301036 + 21301016 21301056 41 AGAGGACTAGGTGAGCAGATCGCGAGGTCAGGAGTTCAAGA AGAGGACTAGGTGAGCAGATCGTGAGGTCAGGAGTTCAAGA < 41bp 0.823966193893337 0.610835255720537 0.94254017 0.92076313 prediction 0.4262618763456 Functional Loss - ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21301036 chr19:21301038 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_87128 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:21301009-21301038
64251 chr15 75091736 75091736 1 + C T UCEC 75091733 + 75091713 75091753 41 GACTACACGCTGTGCGTGAGCTGCGACGGCAAGGTGGAGCA GACTACACGCTGTGCGTGAGCTGTGACGGCAAGGTGGAGCA < 41bp 0.74984479684598 0.536718489979954 0.15864894 0.16752788 prediction 0.426252613732053 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75091733 chr15:75091736 synonymous SNV . 0 24 hm5C_associated_SNPs_87133 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr15:75091716-75091750
64251 chr12 57488446 57488446 1 + C T UCEC 57488444 + 57488424 57488464 41 CCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAG CCTGCCCCAGGACCCCATCCCGTGCTGGTGGAGGGTCGCAG < 41bp 0.713125810398757 0.455053878638072 0.28066218 0.16181588 prediction 0.426251620797515 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57488444 chr12:57488446 nonsynonymous SNV 0.805 1 23 hm5C_associated_SNPs_87134 0 0 1 PRPF8 POSTAR2 ENCODE chr12:57488377-57488455
64251 chr12 57488447 57488447 1 + G A UCEC 57488444 + 57488424 57488464 41 CCTGCCCCAGGACCCCATCCCGCGCTGGTGGAGGGTCGCAG CCTGCCCCAGGACCCCATCCCGCACTGGTGGAGGGTCGCAG < 41bp 0.713125810398757 0.477549197259638 0.28066218 0.05692169 prediction 0.426251620797515 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57488444 chr12:57488447 synonymous SNV . 0 24 hm5C_associated_SNPs_87135 0 0 1 PRPF8 POSTAR2 ENCODE chr12:57488377-57488455
64251 chr16 230981 230981 1 + C T rs201357046 230979 + 230959 230999 41 GCCTTGAGCGCTCGCCGCAGCTCCTGGGCCACTGCCTGCTG GCCTTGAGCGCTCGCCGCAGCTTCTGGGCCACTGCCTGCTG < 41bp 0.713118175488894 0.477071037691466 0.21964121 0.06848398 prediction 0.426236350977789 Functional Loss - HBQ1 ENSG00000086506 CDS Human protein_coding chr16:230979 chr16:230981 synonymous SNV . 0 23 hm5C_associated_SNPs_87143 0 0 3 DROSHA POSTAR2 ENCODE chr16:230917-231009
64251 chr16 67650719 67650719 1 + C T UCEC 67650716 + 67650696 67650736 41 GTGGAGAATTGGTTCGGCATCGTCGTTACAAACACACCCAC GTGGAGAATTGGTTCGGCATCGTTGTTACAAACACACCCAC < 41bp 0.719996451750908 0.506883682859969 0.16695648 0.04090658 prediction 0.426225537781878 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67650716 chr16:67650719 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87147 1 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:67650669-67650746
64251 chr19 13879458 13879458 1 + C T UCEC 13879455 + 13879435 13879475 41 GGCCCTACAACCAGGGAGCCCGGCTGACGGCCTTTGAGCTG GGCCCTACAACCAGGGAGCCCGGTTGACGGCCTTTGAGCTG < 41bp 0.713106187456995 0.499354721483146 0.5801796 0.43745726 prediction 0.42621237491399 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879455 chr19:13879458 synonymous SNV . 0 24 hm5C_associated_SNPs_87149 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:13879446-13879490
64251 chr7 6193432 6193432 1 + G T CESC 6193429 + 6193409 6193449 41 CCTCCCGAGGACCGCGACGCCGAGCCTCAGCCTGGCAGCCC CCTCCCGAGGACCGCGACGCCGATCCTCAGCCTGGCAGCCC < 41bp 0.713103043947186 0.313676126684666 0.66246533 0.5670954 prediction 0.426206087894373 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193429 chr7:6193432 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_87153 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:6193432-6193465
64251 chr2 101611915 101611915 1 + C T BLCA 101611912 + 101611892 101611932 41 CAGCAGGACTCGCTACTTCTCTCCACCTACTCACAACAGCC CAGCAGGACTCGCTACTTCTCTCTACCTACTCACAACAGCC < 41bp 0.713102694662768 0.495238238768659 0.9252533 0.80906326 prediction 0.426205389325537 Functional Loss - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101611912 chr2:101611915 synonymous SNV . 0 24 hm5C_associated_SNPs_87154 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:101611903-101611930
64251 chr6 71236057 71236057 1 + G T UCEC 71236055 + 71236035 71236075 41 AAGAGGATGAGGAGGAAGAGCAGGATCAACAAATGGTTCAA AAGAGGATGAGGAGGAAGAGCATGATCAACAAATGGTTCAA < 41bp 0.713102344558658 0.397549850003571 0.8824332 0.26883453 prediction 0.426204689117316 Functional Loss - FAM135A ENSG00000082269 CDS Human protein_coding chr6:71236055 chr6:71236057 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_87155 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:71236052-71236082
64251 chr7 100466341 100466341 1 + G A UCEC 100466338 + 100466318 100466358 41 TCTCAGGCCTCTGGGCCCCTCCCGGGCCCCCACTTTCCTCT TCTCAGGCCTCTGGGCCCCTCCCAGGCCCCCACTTTCCTCT < 41bp 0.813785709352269 0.600684011478411 0.26542047 0.30936375 prediction 0.426203395747716 Functional Loss - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466338 chr7:100466341 synonymous SNV . 0 24 hm5C_associated_SNPs_87156 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr7:100466332-100466362
64251 chr11 57428609 57428609 1 + T C UCEC 57428608 + 57428588 57428628 41 AAATTTTCAGATGTGAAAATCTACAAAGTTGGGGCACCCAC AAATTTTCAGATGTGAAAATCCACAAAGTTGGGGCACCCAC < 41bp 0.713101629328862 0.448640280507355 0.9343185 0.08901161 prediction 0.426203258657725 Functional Loss - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428608 chr11:57428609 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_87157 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:57428600-57428620
64251 chr17 43227034 43227034 1 + G A BRCA 43227031 + 43227011 43227051 41 AAACATAGGAGACGCCCGTCCAAGAAGAAGCGGCATTGGAA AAACATAGGAGACGCCCGTCCAAAAAGAAGCGGCATTGGAA < 41bp 0.780339108750312 0.56723779609168 0.3409099 0.14525503 prediction 0.426202625317263 Functional Loss - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43227031 chr17:43227034 synonymous SNV . 0 24 hm5C_associated_SNPs_87158 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:43227020-43227040
64251 chr16 1396257 1396257 1 + G A COAD 1396254 + 1396234 1396274 41 CTGGCATGGCCAGAGGGGGCCACGGGGCCCGAGGGGGTGCT CTGGCATGGCCAGAGGGGGCCACAGGGCCCGAGGGGGTGCT < 41bp 0.713100207125959 0.467228733712347 0.9019551 0.87575513 prediction 0.426200414251918 Functional Loss - BAIAP3 ENSG00000007516 CDS Human protein_coding chr16:1396254 chr16:1396257 synonymous SNV . 0 24 hm5C_associated_SNPs_87160 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1396219-1396270
64251 chr13 115090645 115090645 1 + C T BLCA 115090643 + 115090623 115090663 41 TCTCCAGAGCTCAGAAAACCCTCAGGGTCACCAGATCTTTG TCTCCAGAGCTCAGAAAACCCTTAGGGTCACCAGATCTTTG < 41bp 0.713096700875721 0.434849818787163 0.08411974 0.15117785 prediction 0.426193401751442 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090643 chr13:115090645 nonsynonymous SNV 0.962 1 23 hm5C_associated_SNPs_87161 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr13:115090617-115090649
64251 chr12 123741772 123741772 1 + C T rs114120858 123741770 + 123741750 123741790 41 TGCACGATTCAAGAATAAAACTCGGCTGGGCACGGTGGACG TGCACGATTCAAGAATAAAACTTGGCTGGGCACGGTGGACG < 41bp 0.801906182297663 0.588810801224328 0.3392841 0.2637489 prediction 0.42619076214667 Functional Loss - C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123741770 chr12:123741772 . . 0 23 hm5C_associated_SNPs_87163 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:123741751-123741784
64251 chr22 50282513 50282513 1 + A T rs193069663 50282509 + 50282489 50282529 41 TGGCCCACCCATCTCTCCCTCGCCAGCAGCCCTGGCCAGTG TGGCCCACCCATCTCTCCCTCGCCTGCAGCCCTGGCCAGTG < 41bp 0.713095015910907 0.413503891760596 0.33378285 0.09214729 prediction 0.426190031821814 Functional Loss - ZBED4 ENSG00000100426 UTR3 Human protein_coding chr22:50282509 chr22:50282513 . . 0 25 hm5C_associated_SNPs_87164 0 0 2 XPO5 POSTAR2 ENCODE chr22:50282458-50282533
64251 chr20 37384634 37384634 1 + C T rs114985200 37384632 + 37384612 37384652 41 AGCAGGCTAAGCAGAAAATCCTCCAAGCGGAAGTCAACCTC AGCAGGCTAAGCAGAAAATCCTTCAAGCGGAAGTCAACCTC < 41bp 0.886148445892326 0.67305478974173 0.94896966 0.7049995 prediction 0.426187312301191 Functional Loss - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37384632 chr20:37384634 synonymous SNV . 0 23 hm5C_associated_SNPs_87166 0 0 4 PPIG POSTAR2 ENCODE chr20:37384623-37384675
64251 chr15 42855965 42855965 1 + G T LIHC 42855963 + 42855943 42855983 41 TCAGATATATGGTACATTTGCTGGAGTTGGCTGTGACTTTC TCAGATATATGGTACATTTGCTTGAGTTGGCTGTGACTTTC < 41bp 0.896672786074548 0.683588057218938 0.41153705 0.20140675 prediction 0.42616945771122 Functional Loss - HAUS2 ENSG00000137814 CDS Human protein_coding chr15:42855963 chr15:42855965 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_87172 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:42855951-42855987
64251 chr16 3077020 3077020 1 + G A UCEC 3077017 + 3076997 3077037 41 CCCTCCCCATCCCAGGAGTGCTCGAGGCCCCACAATGGGCG CCCTCCCCATCCCAGGAGTGCTCAAGGCCCCACAATGGGCG < 41bp 0.813259906104411 0.600181072819395 0.4189493 0.31452602 prediction 0.426157666570032 Functional Loss - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3077017 chr16:3077020 synonymous SNV . 0 24 hm5C_associated_SNPs_87176 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr16:3077009-3077046
64251 chr17 48750362 48750362 1 + C T STAD 48750359 + 48750339 48750379 41 ACCTGTCTGGGGGCCAGCGGCAGCGGGTCAGTCTGGCTCGA ACCTGTCTGGGGGCCAGCGGCAGTGGGTCAGTCTGGCTCGA < 41bp 0.721660749144598 0.508582641826584 0.8943928 0.83494353 prediction 0.426156214636027 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48750359 chr17:48750362 nonsynonymous SNV 0.980 5 24 hm5C_associated_SNPs_87177 0 0 5 BUD13 POSTAR2 ENCODE chr17:48750338-48750386
64251 chr4 184367881 184367881 1 + G A rs73870527 184367878 + 184367858 184367898 41 GGCACATCCTTACTGACTCCCAAGAGCAGCTCTTCAACAAA GGCACATCCTTACTGACTCCCAAAAGCAGCTCTTCAACAAA < 41bp 0.752765739222085 0.539693237274344 0.4916476 0.17636773 prediction 0.426145003895483 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367878 chr4:184367881 synonymous SNV . 0 24 hm5C_associated_SNPs_87181 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr4:184367837-184367881
64251 chr6 160219129 160219129 1 + C T STAD 160219126 + 160219106 160219146 41 TGACAGAAGGTGGTGTGGTTCTACGGGAACCTCAGAGAATC TGACAGAAGGTGGTGTGGTTCTATGGGAACCTCAGAGAATC < 41bp 0.714397648417366 0.501325687161516 0.105697125 0.15700546 prediction 0.426143922511698 Functional Loss - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160219126 chr6:160219129 nonsynonymous SNV 0.955 1 24 hm5C_associated_SNPs_87182 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:160219089-160219300
64251 chr1 246810613 246810613 1 + G A LUSC 246810610 + 246810590 246810630 41 CTGCTCTGCAGCGCTGAAGCCACGTTAGCGCTCCACACCCA CTGCTCTGCAGCGCTGAAGCCACATTAGCGCTCCACACCCA < 41bp 0.803896530840605 0.59083607986984 0.41012567 0.6618863 prediction 0.42612090194153 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810610 chr1:246810613 synonymous SNV . 0 24 hm5C_associated_SNPs_87189 0 0 1 RBM15 POSTAR2 ENCODE chr1:246810608-246810665
64251 chr2 176957927 176957927 1 + A C LUSC 176957926 + 176957906 176957946 41 GGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCAC GGCGCGCCCGGAGGCTCCCCCCGCCAAAGAGTGCCCAGCAC < 41bp 0.823979609473454 0.610923162956022 0.7111647 0.76007855 prediction 0.426112893034863 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176957926 chr2:176957927 synonymous SNV . 0 22 hm5C_associated_SNPs_87191 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176957920-176957940
64251 chr12 48175570 48175570 1 + C T rs74854988 48175568 + 48175548 48175588 41 GCTATCTGATTAAGCCATTCCGCTAGTTCAGTTGTGCCCTG GCTATCTGATTAAGCCATTCCGTTAGTTCAGTTGTGCCCTG < 41bp 0.77381521579799 0.560763241877429 0.33196297 0.38496396 prediction 0.426103947841121 Functional Loss - SLC48A1 ENSG00000211584 UTR3 Human protein_coding chr12:48175568 chr12:48175570 . . 0 23 hm5C_associated_SNPs_87193 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr12:48175534-48175572
64251 chr17 7606672 7606672 1 + G A COAD 7606669 + 7606649 7606689 41 CTGGGCCTTCCCTTGCTCTCCACGCGCCACGTCCACCTTGA CTGGGCCTTCCCTTGCTCTCCACACGCCACGTCCACCTTGA < 41bp 0.713049795789757 0.464924453663564 0.4132746 0.1035462 prediction 0.426099591579515 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606669 chr17:7606672 synonymous SNV . 0 24 hm5C_associated_SNPs_87195 0 0 1 RPS3 POSTAR2 ENCODE chr17:7606647-7606689
64251 chr2 47278910 47278910 1 + C T PRAD 47278907 + 47278887 47278927 41 TCCCGGCGGGCTTCGTCCATCGCCGCCTCCCGGCTGGAGGA TCCCGGCGGGCTTCGTCCATCGCTGCCTCCCGGCTGGAGGA < 41bp 0.722554667517237 0.509508033978919 0.32220298 0.23322245 prediction 0.426093267076637 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47278907 chr2:47278910 synonymous SNV . 0 24 hm5C_associated_SNPs_87197 0 0 3 PPIG POSTAR2 ENCODE chr2:47278888-47278919
64251 chrX 80532622 80532622 1 + G A UCEC 80532619 + 80532599 80532639 41 TGAAAATAGTCGACCAGCCACAGGTTACCCCCTGCCACCTC TGAAAATAGTCGACCAGCCACAGATTACCCCCTGCCACCTC < 41bp 0.791825952842212 0.578781908964662 0.4011839 0.114102334 prediction 0.426088087755099 Functional Loss - SH3BGRL ENSG00000131171 CDS Human protein_coding chrX:80532619 chrX:80532622 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_87201 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:80532615-80532641
64251 chr19 58130842 58130842 1 + T C LIHC 58130841 + 58130821 58130861 41 GGCTGCCTGAGAGGGCATGACTCTAGTCACAGCAGGAGGGG GGCTGCCTGAGAGGGCATGACCCTAGTCACAGCAGGAGGGG < 41bp 0.813469570321538 0.600425818768355 0.8616253 0.118591666 prediction 0.426087503106365 Functional Loss - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58130841 chr19:58130842 synonymous SNV . 0 22 hm5C_associated_SNPs_87202 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:58130797-58130846
64251 chr2 176983888 176983888 1 + C T COAD 176983885 + 176983865 176983905 41 TCAAGATTTGGTTTCAAAACCGCCGAATGAAACTCAAGAAG TCAAGATTTGGTTTCAAAACCGCTGAATGAAACTCAAGAAG < 41bp 0.742271446212445 0.52923106151484 0.21516234 0.12588182 prediction 0.42608076939521 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983885 chr2:176983888 stopgain 1.000 1 24 hm5C_associated_SNPs_87204 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:176983858-176983953
64251 chr4 6925428 6925428 1 + C T rs553894612 6925425 + 6925405 6925445 41 CCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTG CCCGAGCGGGCCTTCCAGAGCGCTTGCGCGCTGCCATCCTG < 41bp 0.713036830855248 0.499068219165455 0.10901153 0.16959369 prediction 0.426073661710497 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925425 chr4:6925428 synonymous SNV . 0 24 hm5C_associated_SNPs_87205 0 0 1 YBX3 POSTAR2 ENCODE chr4:6925417-6925469
64251 chr1 78395171 78395171 1 + T C STAD 78395170 + 78395150 78395190 41 GGAAGAAAAGAAGGCGTTTGCTGAAGCAAGGAGAAATATGG GGAAGAAAAGAAGGCGTTTGCCGAAGCAAGGAGAAATATGG < 41bp 0.809149626335917 0.596120173737904 0.8065945 0.8783083 prediction 0.426058905196026 Functional Loss - NEXN ENSG00000162614 CDS Human protein_coding chr1:78395170 chr1:78395171 synonymous SNV . 0 22 hm5C_associated_SNPs_87209 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:78395158-78395179
64251 chr14 50088626 50088626 1 + G T LUSC 50088624 + 50088604 50088644 41 GAAATTGGGGTGCATCAATGCTGAGTATCCCGACTCCTTCG GAAATTGGGGTGCATCAATGCTTAGTATCCCGACTCCTTCG < 41bp 0.713028532518134 0.376435387063019 0.3814434 0.19135088 prediction 0.426057065036268 Functional Loss - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088624 chr14:50088626 stopgain 0.999 1 23 hm5C_associated_SNPs_87211 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:50088606-50088629
64251 chr3 49749980 49749980 1 + A C CESC 49749979 + 49749959 49749999 41 CATTGAGCACGGTGATCGCACAGGGTCTCTCTTTGCCTTCA CATTGAGCACGGTGATCGCACCGGGTCTCTCTTTGCCTTCA < 41bp 0.839364856036048 0.626336711777051 0.9309563 0.92506534 prediction 0.426056288517994 Functional Loss - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49749979 chr3:49749980 synonymous SNV . 0 22 hm5C_associated_SNPs_87212 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:49749979-49750000
64251 chr9 130206489 130206489 1 + C T UCEC 130206487 + 130206467 130206507 41 TGCCCGTGGAAGCGAGACCTCGCAAATGTGAGACACACACC TGCCCGTGGAAGCGAGACCTCGTAAATGTGAGACACACACC < 41bp 0.833121076738285 0.620100421258145 0.20078966 0.09629226 prediction 0.426041310960281 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130206487 chr9:130206489 synonymous SNV . 0 23 hm5C_associated_SNPs_87216 0 0 1 UCHL5 POSTAR2 ENCODE chr9:130206472-130206528
64251 chr7 119915289 119915289 1 + G A SKCM 119915286 + 119915266 119915306 41 TTCATTGCCGTCTCTGTCATCGCGAATGTGGTGGAAACAGT TTCATTGCCGTCTCTGTCATCGCAAATGTGGTGGAAACAGT < 41bp 0.759221182134154 0.546204191406632 0.90861547 0.86947864 prediction 0.426033981455044 Functional Loss - KCND2 ENSG00000184408 CDS Human protein_coding chr7:119915286 chr7:119915289 synonymous SNV . 0 24 hm5C_associated_SNPs_87219 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:119915280-119915300
64251 chr2 112813196 112813196 1 + G T LGG 112813194 + 112813174 112813214 41 CGCCGCCTGCCGCTCGGTAGCCGGGCTCCTGCCACGCCGCC CGCCGCCTGCCGCTCGGTAGCCTGGCTCCTGCCACGCCGCC < 41bp 0.919769147326049 0.70675266040562 0.943432 0.8637471 prediction 0.426032973840858 Functional Loss - TMEM87B ENSG00000153214 CDS Human protein_coding chr2:112813194 chr2:112813196 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_87220 0 0 2 GEMIN5 POSTAR2 ENCODE chr2:112813104-112813203
64251 chr3 37035080 37035080 1 + A C rs369737664 37035079 + 37035059 37035099 41 TATTCGGCGGCTGGACGAGACAGTGGTGAACCGCATCGCGG TATTCGGCGGCTGGACGAGACCGTGGTGAACCGCATCGCGG < 41bp 0.724802603787284 0.511787361699823 0.81003964 0.6742105 prediction 0.426030484174922 Functional Loss - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37035079 chr3:37035080 synonymous SNV . 0 22 hm5C_associated_SNPs_87222 3 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:37035060-37035081
64251 chr1 52874286 52874286 1 + T C UCEC 52874285 + 52874265 52874305 41 TTACATGAGGCTGACAGGCACTGCAATTGATTGCTACAAGT TTACATGAGGCTGACAGGCACCGCAATTGATTGCTACAAGT < 41bp 0.713008774499144 0.450079747019662 0.22435054 0.15521333 prediction 0.426017548998288 Functional Loss - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52874285 chr1:52874286 synonymous SNV . 0 22 hm5C_associated_SNPs_87226 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:52874264-52874289
64251 chr19 48244377 48244377 1 + C T rs78985505 48244374 + 48244354 48244394 41 GACGGCGAGGAGGGCTCGGACGACGAGGCCGAGTGGGTGGT GACGGCGAGGAGGGCTCGGACGATGAGGCCGAGTGGGTGGT < 41bp 0.717312776376118 0.504307745901874 0.3929794 0.33559856 prediction 0.426010060948487 Functional Loss - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48244374 chr19:48244377 synonymous SNV . 0 24 hm5C_associated_SNPs_87228 0 0 1 DROSHA POSTAR2 ENCODE chr19:48244343-48244398
64251 chr5 72427368 72427368 1 + G A UCEC 72427365 + 72427345 72427385 41 TTCTCTCTCCTTCTCTTTAGCAGGACCCCAACTTCAGAGGG TTCTCTCTCCTTCTCTTTAGCAGAACCCCAACTTCAGAGGG < 41bp 0.776284058077935 0.563281542984155 0.8839545 0.42620248 prediction 0.42600503018756 Functional Loss - TMEM171 ENSG00000157111 CDS Human protein_coding chr5:72427365 chr5:72427368 synonymous SNV . 0 24 hm5C_associated_SNPs_87232 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:72427365-72427400
64251 chr1 207245702 207245702 1 + G A BLCA 207245699 + 207245679 207245719 41 CTCTCCGTGCCCAGGACATGCAAGAAGGGGCCGACTAGCCG CTCTCCGTGCCCAGGACATGCAAAAAGGGGCCGACTAGCCG < 41bp 0.765031204753404 0.552029129662182 0.1454112 0.12662709 prediction 0.426004150182444 Functional Loss - PFKFB2 ENSG00000123836 CDS Human protein_coding chr1:207245699 chr1:207245702 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_87233 0 0 1 GRWD1 POSTAR2 ENCODE chr1:207245589-207245779
64251 chr16 84779007 84779007 1 + C T UCEC 84779005 + 84778985 84779025 41 AACGGGGTGGAGTTGCACACCACGGAAAGCATAGACTTGGA AACGGGGTGGAGTTGCACACCATGGAAAGCATAGACTTGGA < 41bp 0.839429199712379 0.626428053979897 0.045476735 0.033505052 prediction 0.426002291464963 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84779005 chr16:84779007 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_87234 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:84778999-84779043
64251 chr17 27062332 27062332 1 + G A LUSC 27062329 + 27062309 27062349 41 TACAACCAGAAGAGTGACATCTGGGCCCTGGGCTGTGTCCT TACAACCAGAAGAGTGACATCTGAGCCCTGGGCTGTGTCCT < 41bp 0.712995372719225 0.464682122281694 0.34322834 0.12121627 prediction 0.425990745438451 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27062329 chr17:27062332 stopgain 1.000 1 24 hm5C_associated_SNPs_87236 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:27062320-27062340
64251 chr9 75773670 75773670 1 + C T CESC 75773667 + 75773647 75773687 41 GCGGTGAGCCCCTATCCTACCTTCAATCCATCCTCGGATGT GCGGTGAGCCCCTATCCTACCTTTAATCCATCCTCGGATGT < 41bp 0.712993698613013 0.489647629158836 0.09803593 0.037347496 prediction 0.425987397226027 Functional Loss - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75773667 chr9:75773670 synonymous SNV . 0 24 hm5C_associated_SNPs_87237 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:75773669-75773670
64251 chr11 65745317 65745317 1 + G A STAD 65745314 + 65745294 65745334 41 AGGAGAAGGACGGCTACAAACCCGACGTTAAGATCGAATAC AGGAGAAGGACGGCTACAAACCCAACGTTAAGATCGAATAC < 41bp 0.797736072932932 0.584742679942248 0.2167401 0.17001656 prediction 0.425986785981367 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65745314 chr11:65745317 nonsynonymous SNV 0.582 1 24 hm5C_associated_SNPs_87238 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:65745316-65745341
64251 chr6 147525760 147525760 1 + G A HNSC 147525757 + 147525737 147525777 41 GCAACAGCAGCAGCATCCGCCTGGGAACCGGGAGCCGGAGA GCAACAGCAGCAGCATCCGCCTGAGAACCGGGAGCCGGAGA < 41bp 0.758280049735964 0.545290091574246 0.6934557 0.3188522 prediction 0.425979916323436 Functional Loss - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147525757 chr6:147525760 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_87239 0 0 5 GRWD1 POSTAR2 ENCODE chr6:147525656-147525858
64251 chr3 186302231 186302231 1 + C T UCEC 186302229 + 186302209 186302249 41 GGTTTTCTAGGTACATATTTCCCGGGATAAGATCACCAGGC GGTTTTCTAGGTACATATTTCCTGGGATAAGATCACCAGGC < 41bp 0.712989446391455 0.440308243592784 0.69648015 0.51614505 prediction 0.42597889278291 Functional Loss - DNAJB11 ENSG00000090520 CDS Human protein_coding chr3:186302229 chr3:186302231 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_87240 0 0 9 LIN28A POSTAR2 GSE39873,GSM980593 chr3:186302220-186302240
64251 chr3 23960854 23960854 1 + G A rs373573769 23960851 + 23960831 23960871 41 ACCAAACCAGTCCACAAGCACAGGGAGATGCGTGGGCTGAC ACCAAACCAGTCCACAAGCACAGAGAGATGCGTGGGCTGAC < 41bp 0.783971600491745 0.570983491498643 0.8981054 0.8202193 prediction 0.425976217986204 Functional Loss - RPL15 ENSG00000174748 CDS Human protein_coding chr3:23960851 chr3:23960854 synonymous SNV . 0 24 hm5C_associated_SNPs_87241 0 0 1 METAP2 POSTAR2 ENCODE chr3:23960837-23960939
64251 chr19 17837421 17837421 1 + G A DLBC 17837418 + 17837398 17837438 41 CCGCCGGCGCCGAGCGCACGCTGGCCTCTGTGTGCGCCCTG CCGCCGGCGCCGAGCGCACGCTGACCTCTGTGTGCGCCCTG < 41bp 0.816900414359945 0.603913110165651 0.2323578 0.15601242 prediction 0.425974608388588 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837418 chr19:17837421 nonsynonymous SNV 0.093 0 24 hm5C_associated_SNPs_87242 0 0 4 FMR1 POSTAR2 ENCODE chr19:17837416-17837519
64251 chr11 22777461 22777461 1 + G A SKCM 22777458 + 22777438 22777478 41 TCTGTGTGGAGCGGCTCTCCCAAGGAAGATACCGAGTGGGA TCTGTGTGGAGCGGCTCTCCCAAAGAAGATACCGAGTGGGA < 41bp 0.794787841277219 0.581800992162283 0.73519266 0.117587805 prediction 0.425973698229872 Functional Loss - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22777458 chr11:22777461 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_87244 0 0 6 GRWD1 POSTAR2 ENCODE chr11:22777392-22777485
64251 chr1 170136860 170136860 1 + G A COAD 170136857 + 170136837 170136877 41 GCTTCCCAGAGCAGTGCATCCCCGTGTGGATGTTCGCACTG GCTTCCCAGAGCAGTGCATCCCCATGTGGATGTTCGCACTG < 41bp 0.795213039859685 0.582226432958408 0.20389688 0.28454375 prediction 0.425973213802554 Functional Loss - METTL11B ENSG00000203740 CDS Human protein_coding chr1:170136857 chr1:170136860 nonsynonymous SNV 0.625 4 24 hm5C_associated_SNPs_87245 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:170136855-170136873
64251 chr1 10473239 10473239 1 + G T STAD 10473237 + 10473217 10473257 41 GCCAAAGATCAGGGACAGCGCGGGGCAGAAGGGCACAGGGA GCCAAAGATCAGGGACAGCGCGTGGCAGAAGGGCACAGGGA < 41bp 0.911397331704826 0.698416082107207 0.9055965 0.2786687 prediction 0.425962499195238 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10473237 chr1:10473239 nonsynonymous SNV 0.885 4 23 hm5C_associated_SNPs_87246 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr1:10473217-10473283
64251 chr19 44470147 44470147 1 + G A rs16976937 44470144 + 44470124 44470164 41 AGGCAAGACTATCTATAAGTCACGTGCAACAGAAACCTTAC AGGCAAGACTATCTATAAGTCACATGCAACAGAAACCTTAC < 41bp 0.712978832931684 0.48890019931601 0.2848015 0.16208029 prediction 0.425957665863368 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44470144 chr19:44470147 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_87247 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44470128-44470149
64251 chr15 75641641 75641641 1 + G A UCEC 75641638 + 75641618 75641658 41 CCTTGGGGGAAAGTGGCAGCCGGGCCGCGGGCCCTGTGTCT CCTTGGGGGAAAGTGGCAGCCGGACCGCGGGCCCTGTGTCT < 41bp 0.81098792605709 0.598009616897458 0.592524 0.33623332 prediction 0.425956618319263 Functional Loss - NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75641638 chr15:75641641 nonsynonymous SNV 0.164 0 24 hm5C_associated_SNPs_87248 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:75641628-75641673
64251 chr11 65819874 65819874 1 + G A BLCA 65819871 + 65819851 65819891 41 CTAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAA CTAAGATGGCGACGGAGCATCCCAAGCCTCCCAAAGCAGAA < 41bp 0.783040603374461 0.570064784014242 0.12485278 0.034469396 prediction 0.425951638720439 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65819871 chr11:65819874 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_87252 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65819840-65819880
64251 chr1 203830805 203830805 1 + G T LUAD 203830803 + 203830783 203830823 41 CCACCATGGCGTACCGTGGCCAGGGTCAGAAAGTGCAGAAG CCACCATGGCGTACCGTGGCCATGGTCAGAAAGTGCAGAAG < 41bp 0.891968844499347 0.678993171073155 0.901548 0.53309095 prediction 0.425951346852384 Functional Loss - SNRPE ENSG00000182004 CDS Human protein_coding chr1:203830803 chr1:203830805 nonsynonymous SNV 0.991 2 23 hm5C_associated_SNPs_87253 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:203830760-203830820
64251 chr10 126523290 126523290 1 + G A COAD 126523287 + 126523267 126523307 41 GGAAAGGAGTGTCTTTATGCCTCGACCTCAAGCTGTGGGCT GGAAAGGAGTGTCTTTATGCCTCAACCTCAAGCTGTGGGCT < 41bp 0.790431338915044 0.57745635233293 0.120417506 0.052261055 prediction 0.425949973164227 Functional Loss - ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126523287 chr10:126523290 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_87254 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:126523273-126523312
64251 chr10 116698036 116698036 1 + G T LUAD 116698032 + 116698012 116698052 41 TATGGCCGCTTCTGAGGCGGCGGTGGTGTCTTCGCCGTCTT TATGGCCGCTTCTGAGGCGGCGGTTGTGTCTTCGCCGTCTT < 41bp 0.72284437799199 0.509882095137443 0.37517315 0.2799947 prediction 0.425924565709094 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116698032 chr10:116698036 synonymous SNV . 0 25 hm5C_associated_SNPs_87262 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:116698034-116698087
64251 chr12 124245746 124245746 1 + G A rs112529654 124245743 + 124245723 124245763 41 GGATTACAGGCGTGAGCCACCGCGCCTGGCCCTCTGCAGTT GGATTACAGGCGTGAGCCACCGCACCTGGCCCTCTGCAGTT < 41bp 0.713159108053553 0.500198648607634 0.65770775 0.36939153 prediction 0.425920918891838 Functional Loss - ATP6V0A2 ENSG00000185344 UTR3 Human protein_coding chr12:124245743 chr12:124245746 . . 0 24 hm5C_associated_SNPs_87264 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:124245738-124245772
64251 chr15 58840717 58840717 1 + C T UCEC 58840715 + 58840695 58840735 41 CTACCACGTCCGCCAGGAGCCGCGGAGCAAGAGCAAGAGGC CTACCACGTCCGCCAGGAGCCGTGGAGCAAGAGCAAGAGGC < 41bp 0.834332145153686 0.621372455213804 0.82268906 0.3843299 prediction 0.425919379879764 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58840715 chr15:58840717 nonsynonymous SNV 0.005 2 23 hm5C_associated_SNPs_87265 0 0 2 SND1 POSTAR2 ENCODE chr15:58840710-58840765
64251 chr14 24114366 24114366 1 + G T UCEC 24114362 + 24114342 24114382 41 TCCATCCAGGATTGGGGAGTCAGAGGACTGTGCAGGAATCG TCCATCCAGGATTGGGGAGTCAGATGACTGTGCAGGAATCG < 41bp 0.721538036145122 0.508584344253557 0.90649444 0.89014727 prediction 0.425907383783131 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114362 chr14:24114366 nonsynonymous SNV 0.869 4 25 hm5C_associated_SNPs_87268 0 0 9 DDX55 POSTAR2 ENCODE chr14:24114356-24114386
64251 chr11 126201400 126201400 1 + G T LUAD 126201397 + 126201377 126201417 41 CGAGAGACGGGAGATGACTACAGGAATATTACTTTACCCCA CGAGAGACGGGAGATGACTACAGTAATATTACTTTACCCCA < 41bp 0.936491501328871 0.723545436688254 0.82548785 0.3412308 prediction 0.425892129281234 Functional Loss - DCPS ENSG00000110063 CDS Human protein_coding chr11:126201397 chr11:126201400 nonsynonymous SNV 0.369 0 24 hm5C_associated_SNPs_87275 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:126201381-126201403
64251 chr4 48422313 48422313 1 + C T BLCA 48422311 + 48422291 48422331 41 CCTATGGTTCAGAGCACAGTCTCAGCAAATCCTCCCAGCAA CCTATGGTTCAGAGCACAGTCTTAGCAAATCCTCCCAGCAA < 41bp 0.712943668159779 0.426254794680313 0.025865406 0.03865969 prediction 0.425887336319558 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48422311 chr4:48422313 nonsynonymous SNV 0.646 0 23 hm5C_associated_SNPs_87277 0 0 5 IGF2BP1 POSTAR2 ENCODE chr4:48422275-48422391
64251 chr16 57503165 57503165 1 + C T STAD 57503163 + 57503143 57503183 41 GAAGACCAGACGCGACATGTCACGTCTCGAGACCTCATCTC GAAGACCAGACGCGACATGTCATGTCTCGAGACCTCATCTC < 41bp 0.852603861469151 0.639663129877989 0.007029116 0.012010485 prediction 0.425881463182324 Functional Loss - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57503163 chr16:57503165 nonsynonymous SNV 0.283 4 23 hm5C_associated_SNPs_87281 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr16:57503161-57503188
64251 chr1 75622741 75622741 1 + C T ESCA 75622738 + 75622718 75622758 41 CCAAGATGGAACGATGTTAACTGCGCTGCATAGTTATATGG CCAAGATGGAACGATGTTAACTGTGCTGCATAGTTATATGG < 41bp 0.712940362818182 0.495898636886259 0.123125374 0.13297325 prediction 0.425880725636364 Functional Loss - LHX8 ENSG00000162624 CDS Human protein_coding chr1:75622738 chr1:75622741 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_87282 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:75622722-75622750
64251 chr3 43389307 43389307 1 + C T LUAD 43389304 + 43389284 43389324 41 GTTAAAGATGAATATAGCTTCTCCAGGTACAGTTCACAAAC GTTAAAGATGAATATAGCTTCTCTAGGTACAGTTCACAAAC < 41bp 0.777402751221955 0.564471484999807 0.9267493 0.57182556 prediction 0.425862532444295 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389304 chr3:43389307 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_87285 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr3:43389300-43389320
64251 chr1 46032603 46032603 1 + G A SKCM 46032600 + 46032580 46032620 41 TGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCT TGGAACACCAAGCACCACCCCGAAGATGTGGAGCCTGCCCT < 41bp 0.805887132451121 0.59295647760818 0.48784956 0.18096495 prediction 0.425861309685882 Functional Loss - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46032600 chr1:46032603 synonymous SNV . 0 24 hm5C_associated_SNPs_87287 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:46032578-46032614
64251 chr1 212254045 212254045 1 + C T ESCA 212254042 + 212254022 212254062 41 ACCAGGAGGTGATAAACTTTCCACGGTGGGTTGGGCCTCTC ACCAGGAGGTGATAAACTTTCCATGGTGGGTTGGGCCTCTC < 41bp 0.712928865384042 0.48966189718865 0.64391637 0.64199585 prediction 0.425857730768084 Functional Loss - DTL ENSG00000143476 CDS Human protein_coding chr1:212254042 chr1:212254045 nonsynonymous SNV 0.981 0 24 hm5C_associated_SNPs_87289 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:212254019-212254064
64251 chr2 208576668 208576668 1 + G A COAD 208576665 + 208576645 208576685 41 GTGTCCCCCAATGCCAGCCCCAAGCTGGGCCGGCGCGCGGG GTGTCCCCCAATGCCAGCCCCAAACTGGGCCGGCGCGCGGG < 41bp 0.712924477074888 0.456626365023129 0.15250549 0.1333156 prediction 0.425848954149775 Functional Loss - CCNYL1 ENSG00000163249 CDS Human protein_coding chr2:208576665 chr2:208576668 synonymous SNV . 0 24 hm5C_associated_SNPs_87290 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:208576640-208576668
64251 chr13 20208066 20208066 1 + G C BLCA 20208065 + 20208045 20208085 41 GAGGACGGAGAGGATGTGTTCGAGGTGGAGAAGATCCTGGA GAGGACGGAGAGGATGTGTTCCAGGTGGAGAAGATCCTGGA < 41bp 0.887047847959066 0.674126248853853 0.91299963 0.8788238 prediction 0.425843198210425 Functional Loss - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20208065 chr13:20208066 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_87292 0 0 18 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr13:20208060-20208080
64251 chr14 94514189 94514189 1 + C T rs545155495 94514187 + 94514167 94514207 41 AGACTGGCTGGAGAAATTCCCTCTAGGAGACTTGCCTGTGC AGACTGGCTGGAGAAATTCCCTTTAGGAGACTTGCCTGTGC < 41bp 0.734910916838788 0.521995040325544 0.9182122 0.24512288 prediction 0.425831753026488 Functional Loss - OTUB2 ENSG00000089723 UTR3 Human protein_coding chr14:94514187 chr14:94514189 . . 0 23 hm5C_associated_SNPs_87297 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:94514179-94514209
64251 chr2 27150132 27150132 1 + A C COAD 27150128 + 27150108 27150148 41 ACTTGTTCTCCAGGTGAAAGCAGAAATGGAGACACTGGTGA ACTTGTTCTCCAGGTGAAAGCAGACATGGAGACACTGGTGA < 41bp 0.712914880570636 0.301205732404766 0.33361718 0.33625132 prediction 0.425829761141273 Functional Loss - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27150128 chr2:27150132 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_87298 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:27150124-27150149
64251 chr16 84801856 84801856 1 + G A LIHC 84801853 + 84801833 84801873 41 GCCACTTTGCAGCCATTTTTCACGTTGCAGTTGGATATCCA GCCACTTTGCAGCCATTTTTCACATTGCAGTTGGATATCCA < 41bp 0.783414680053559 0.570504294668087 0.2982278 0.15880907 prediction 0.425820770770943 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84801853 chr16:84801856 nonsynonymous SNV 0.920 0 24 hm5C_associated_SNPs_87301 0 0 14 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:84801840-84801860
64251 chr1 243480080 243480080 1 + C T BLCA 243480077 + 243480057 243480097 41 AGAAAGAGATGACTTGATGTCTGCACTAGTTTCCGTAAGGA AGAAAGAGATGACTTGATGTCTGTACTAGTTTCCGTAAGGA < 41bp 0.712905693738486 0.480196878301108 0.11911425 0.17224476 prediction 0.425811387476973 Functional Loss - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243480077 chr1:243480080 nonsynonymous SNV 0.252 0 24 hm5C_associated_SNPs_87303 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:243480080-243480100
64251 chr12 98989530 98989530 1 + G A READ 98989527 + 98989507 98989547 41 TACAGTTGTGAATTTGGCTCCGCGAAGTATTATGCACTGTG TACAGTTGTGAATTTGGCTCCGCAAAGTATTATGCACTGTG < 41bp 0.712902355736001 0.484285285885175 0.10292721 0.22091827 prediction 0.425804711472001 Functional Loss - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98989527 chr12:98989530 synonymous SNV . 0 24 hm5C_associated_SNPs_87306 0 0 22 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:98989476-98989535
64251 chr2 70314758 70314758 1 + G C rs528717582 70314757 + 70314737 70314777 41 CCCGCTCCCGCTCGCTCCCGCGGCCCTCGCTCGCCTCGCGC CCCGCTCCCGCTCGCTCCCGCCGCCCTCGCTCGCCTCGCGC < 41bp 0.712900736653996 0.443373746251264 0.93875206 0.6322684 prediction 0.425801473307992 Functional Loss - PCBP1 ENSG00000179818 ncRNA_intronic Human processed_transcript chr2:70314757 chr2:70314758 . . 0 22 hm5C_associated_SNPs_87307 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:70314746-70314772
64251 chr7 92938236 92938236 1 + G A GBM 92938233 + 92938213 92938253 41 AGACTATGTGGATGAGCAGACAGGAGATGGTCCTGTGAAAA AGACTATGTGGATGAGCAGACAGAAGATGGTCCTGTGAAAA < 41bp 0.750451224968094 0.537556594701702 0.8755804 0.5626792 prediction 0.425789260532785 Functional Loss - VPS50 ENSG00000004766 CDS Human protein_coding chr7:92938233 chr7:92938236 nonsynonymous SNV 0.578 3 24 hm5C_associated_SNPs_87311 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:92938214-92938241
64251 chr12 56360905 56360905 1 + A T LAML 56360901 + 56360881 56360921 41 TGGCGCTTAAGAAAATCCGCCTGGACACGTGAGTGGCCTCT TGGCGCTTAAGAAAATCCGCCTGGTCACGTGAGTGGCCTCT < 41bp 0.712890272665843 0.383307596884278 0.7070327 0.25034195 prediction 0.425780545331685 Functional Loss - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56360901 chr12:56360905 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_87314 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:56360900-56360920
64251 chr7 98988690 98988690 1 + C T HNSC 98988687 + 98988667 98988707 41 GCCTGGGTAAGCCACGACAGCACCGTCTGCCTGGCTGATGC GCCTGGGTAAGCCACGACAGCACTGTCTGCCTGGCTGATGC < 41bp 0.738909804808388 0.526021359187752 0.03123027 0.029875636 prediction 0.425776891241273 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98988687 chr7:98988690 synonymous SNV . 0 24 hm5C_associated_SNPs_87316 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98988677-98988703
64251 chr15 42107533 42107533 1 + C T SKCM 42107531 + 42107511 42107551 41 ATTACCTGCTCCTCAGACAACACCATCCGCCTGTGGAACAC ATTACCTGCTCCTCAGACAACATCATCCGCCTGTGGAACAC < 41bp 0.712884653459143 0.460795963679179 0.0480572 0.044604212 prediction 0.425769306918287 Functional Loss - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42107531 chr15:42107533 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_87318 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr15:42107520-42107540
64251 chr7 30651737 30651737 1 + G A UCEC 30651734 + 30651714 30651754 41 ACTTGAGACCAGAAACTGCACAGGGGATTTTCTTGAATTTC ACTTGAGACCAGAAACTGCACAGAGGATTTTCTTGAATTTC < 41bp 0.712883332032604 0.482636733945212 0.77662575 0.34189856 prediction 0.425766664065208 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30651734 chr7:30651737 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_87319 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:30651705-30651748
64251 chr3 179082121 179082121 1 + G T ESCA 179082118 + 179082098 179082138 41 GTCACTACAGAGCTGGATAGCTGGATTGATAAGTTTTGCCT GTCACTACAGAGCTGGATAGCTGTATTGATAAGTTTTGCCT < 41bp 0.926515158533886 0.713633021236197 0.80896556 0.16434473 prediction 0.425764274595378 Functional Loss - MFN1 ENSG00000171109 CDS Human protein_coding chr3:179082118 chr3:179082121 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87321 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:179082094-179082129
64251 chr6 116757919 116757919 1 + G A SKCM 116757916 + 116757896 116757936 41 GCTGGAGAAGCAGATACTGTCCCGAGTCCGGAACACAGCTA GCTGGAGAAGCAGATACTGTCCCAAGTCCGGAACACAGCTA < 41bp 0.732586892806091 0.519709749860036 0.55823517 0.2385123 prediction 0.42575428589211 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116757916 chr6:116757919 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_87324 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:116757899-116757954
64251 chr6 26545537 26545537 1 + C T ESCA 26545535 + 26545515 26545555 41 GTTGTCTGCTAAACCAGCTCCTCCAAAACCAGAGCCCAGGC GTTGTCTGCTAAACCAGCTCCTTCAAAACCAGAGCCCAGGC < 41bp 0.872999732471767 0.660123096191388 0.96045816 0.13297865 prediction 0.425753272560758 Functional Loss - HMGN4 ENSG00000182952 CDS Human protein_coding chr6:26545535 chr6:26545537 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_87326 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:26545480-26545541
64251 chr6 126277880 126277880 1 + G T rs141871928 126277877 + 126277857 126277897 41 GCGTCATTACCAACGAGGCGCAGGGGTCAGGACGACTCTCG GCGTCATTACCAACGAGGCGCAGTGGTCAGGACGACTCTCG < 41bp 0.928448936317162 0.715580092576852 0.8995112 0.53533316 prediction 0.425737687480619 Functional Loss - HINT3 ENSG00000111911 upstream Human protein_coding chr6:126277877 chr6:126277880 . . 0 24 hm5C_associated_SNPs_87332 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585675 chr6:126277880-126277900
64251 chr22 29885594 29885594 1 + A T READ 29885592 + 29885572 29885612 41 CCCCTGAGAAGGCCAAGTCCCCAGAGAAGGAAGAGGCCAAG CCCCTGAGAAGGCCAAGTCCCCTGAGAAGGAAGAGGCCAAG < 41bp 0.712868378497028 0.499991700424278 0.35720164 0.101629704 prediction 0.425736756994057 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885592 chr22:29885594 synonymous SNV . 0 23 hm5C_associated_SNPs_87333 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr22:29885583-29885604
64251 chrX 51640976 51640976 1 + T C LGG 51640975 + 51640955 51640995 41 CCGAGTCCCTGGCTGGCATACTGGGAACGTAAGATGGGAAA CCGAGTCCCTGGCTGGCATACCGGGAACGTAAGATGGGAAA < 41bp 0.817506861014129 0.604648163865552 0.75030506 0.88692844 prediction 0.425717394297154 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640975 chrX:51640976 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_87338 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:51640950-51640983
64251 chr10 20436754 20436754 1 + G A SKCM 20436751 + 20436731 20436771 41 AGTGGGACCATGTACATCTCCAGGATAATTATAACCTGGGA AGTGGGACCATGTACATCTCCAGAATAATTATAACCTGGGA < 41bp 0.768884847432766 0.55602914149494 0.50192857 0.29682595 prediction 0.425711411875651 Functional Loss - PLXDC2 ENSG00000120594 CDS Human protein_coding chr10:20436751 chr10:20436754 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87340 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:20436742-20436770
64251 chr1 29650006 29650006 1 + C T COAD 29650004 + 29649984 29650024 41 CTTCCGGGTGCAGAACATCTCTCGGGTGAGTGGTCTGAGGA CTTCCGGGTGCAGAACATCTCTTGGGTGAGTGGTCTGAGGA < 41bp 0.843869756941179 0.631016690705306 0.87936383 0.5319132 prediction 0.425706132471745 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29650004 chr1:29650006 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_87342 0 0 1 PRPF8 POSTAR2 ENCODE chr1:29650000-29650050
64251 chr9 35679202 35679202 1 + G T UCEC 35679200 + 35679180 35679220 41 AGGCTCAGAGACTCAGGTCCCAGGACTGGACATATCTGCAC AGGCTCAGAGACTCAGGTCCCATGACTGGACATATCTGCAC < 41bp 0.906838725875157 0.69398745162678 0.8489115 0.13481614 prediction 0.425702548496755 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35679200 chr9:35679202 stopgain 0.646 1 23 hm5C_associated_SNPs_87344 0 0 1 BUD13 POSTAR2 ENCODE chr9:35679171-35679212
64251 chr4 158254056 158254056 1 + G A HNSC 158254053 + 158254033 158254073 41 GAAGCAAAGAATTGAAATCTCCCGAAGGGGGAATGCAGGAG GAAGCAAAGAATTGAAATCTCCCAAAGGGGGAATGCAGGAG < 41bp 0.7398111942769 0.526961450923436 0.12227544 0.106038004 prediction 0.425699486706927 Functional Loss - GRIA2 ENSG00000120251 CDS Human protein_coding chr4:158254053 chr4:158254056 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_87345 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:158254040-158254060
64251 chr3 37285055 37285055 1 + T C COAD 37285054 + 37285034 37285074 41 GCTGCGCCATGTTCAAGAAACTGAAGCAAAAGATCAGCGAG GCTGCGCCATGTTCAAGAAACCGAAGCAAAAGATCAGCGAG < 41bp 0.712844108183958 0.493090673366187 0.7480212 0.3748935 prediction 0.425688216367916 Functional Loss - GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37285054 chr3:37285055 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_87351 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:37285008-37285055
64251 chr10 73983767 73983767 1 + G A rs147690332 73983764 + 73983744 73983784 41 TGTCTCAGACCTTGCCCCACCACGGAAAGCCCTTTTCACCT TGTCTCAGACCTTGCCCCACCACAGAAAGCCCTTTTCACCT < 41bp 0.712841950186488 0.476992170523237 0.19160196 0.17468101 prediction 0.425683900372977 Functional Loss - ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73983764 chr10:73983767 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_87353 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:73983737-73983768
64251 chr17 41139398 41139398 1 + G A rs138665314 41139395 + 41139375 41139415 41 TATCAAGAGGGCAGTTATGACTCGCTGCCACAGTCCGTGGT TATCAAGAGGGCAGTTATGACTCACTGCCACAGTCCGTGGT < 41bp 0.712834572863734 0.480240401425172 0.30661383 0.052466273 prediction 0.425669145727469 Functional Loss - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41139395 chr17:41139398 synonymous SNV . 0 24 hm5C_associated_SNPs_87355 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:41139380-41139400
64251 chr16 3119464 3119464 1 + G A rs183072816 3119461 + 3119441 3119481 41 CGCACACTCAGTCCCCCTGCCTGGCGTTCCTGCCGCAGCTC CGCACACTCAGTCCCCCTGCCTGACGTTCCTGCCGCAGCTC < 41bp 0.712828554028526 0.479391078493386 0.571236 0.31583768 prediction 0.425657108057053 Functional Loss - IL32 ENSG00000008517 UTR3 Human protein_coding chr16:3119461 chr16:3119464 . . 0 24 hm5C_associated_SNPs_87358 0 0 7 DDX55 POSTAR2 ENCODE chr16:3119382-3119508
64251 chr3 127783795 127783795 1 - G A STAD 127783797 - 127783777 127783817 41 ATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGT ATTCTGGCGGTAGAACGCCTCCTGAAGGGCTCGGACCTTGT < 41bp 0.827476254993547 0.614653008519583 0.22510672 0.09663576 prediction 0.425646492947928 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127783797 chr3:127783795 nonsynonymous SNV 0.359 1 23 hm5C_associated_SNPs_87364 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:127783777-127783804
64251 chr3 51680453 51680453 1 + C T UCEC 51680450 + 51680430 51680470 41 TATGCGCAGTATTACCCTGCCAGCGATCAGAGCCTGACCAG TATGCGCAGTATTACCCTGCCAGTGATCAGAGCCTGACCAG < 41bp 0.712820502318316 0.493807365475071 0.10730508 0.16297048 prediction 0.425641004636632 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51680450 chr3:51680453 synonymous SNV . 0 24 hm5C_associated_SNPs_87369 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:51680438-51680465
64251 chr17 40705294 40705294 1 - C T UCEC 40705297 - 40705277 40705317 41 AGGCTCACCCAGCACGTCCACGCGGCCCTCAGTCACGCGTT AGGCTCACCCAGCACGTCCACGCAGCCCTCAGTCACGCGTT < 41bp 0.811849043283759 0.599038371905834 0.46982977 0.1332638 prediction 0.42562134275585 Functional Loss - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705297 chr17:40705294 nonsynonymous SNV 0.026 5 24 hm5C_associated_SNPs_87373 0 0 1 RBM15 POSTAR2 ENCODE chr17:40705293-40705375
64251 chr19 3535982 3535982 1 + G C rs568770388 3535978 + 3535958 3535998 41 GCAGGGGAGTGGGGCCTGAGCTGAGCACTGCCCCCTCACCC GCAGGGGAGTGGGGCCTGAGCTGACCACTGCCCCCTCACCC < 41bp 0.712810323558862 0.440023742280454 0.4126637 0.21673101 prediction 0.425620647117725 Functional Loss - FZR1 ENSG00000105325 UTR3 Human protein_coding chr19:3535978 chr19:3535982 . . 0 25 hm5C_associated_SNPs_87374 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:3535977-3536023
64251 chr10 94454414 94454414 1 + T C LIHC 94454413 + 94454393 94454433 41 AGGTGCTTCTTTGGATAGCTCTCAATGTTCGCCCTCCCCTG AGGTGCTTCTTTGGATAGCTCCCAATGTTCGCCCTCCCCTG < 41bp 0.828252243034615 0.615441971380927 0.2556403 0.0848335 prediction 0.425620543307377 Functional Loss - HHEX ENSG00000152804 CDS Human protein_coding chr10:94454413 chr10:94454414 synonymous SNV . 0 22 hm5C_associated_SNPs_87375 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:94454385-94454420
64251 chr20 61453154 61453154 1 + G A UCEC 61453151 + 61453131 61453171 41 CCCCAGGTGGGATCGGCCTCCGCGGCCCCCCGGTGAGTGGC CCCCAGGTGGGATCGGCCTCCGCAGCCCCCCGGTGAGTGGC < 41bp 0.805754679304862 0.592944976487187 0.88961816 0.71690714 prediction 0.42561940563535 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61453151 chr20:61453154 nonsynonymous SNV 0.799 3 24 hm5C_associated_SNPs_87376 0 0 7 BUD13 POSTAR2 ENCODE chr20:61453145-61453160
64251 chr19 7536478 7536478 1 + G A rs149051326 7536475 + 7536455 7536495 41 GGGTCCTGGGAACTGCAGATCCCGGGGGGATTCAGCCCTTC GGGTCCTGGGAACTGCAGATCCCAGGGGGATTCAGCCCTTC < 41bp 0.712805355460257 0.474926905379577 0.8799076 0.4505505 prediction 0.425610710920515 Functional Loss - ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536475 chr19:7536478 . . 0 24 hm5C_associated_SNPs_87377 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7536473-7536489
64251 chr13 113773820 113773820 1 + C T rs557431193 113773818 + 113773798 113773838 41 CACACAGAGATATGCACACACACGGATGCACACACAGATGG CACACAGAGATATGCACACACATGGATGCACACACAGATGG < 41bp 0.731226233183611 0.518424596159972 0.11130679 0.28511322 prediction 0.425603274047277 Functional Loss - F7 ENSG00000057593 UTR3 Human protein_coding chr13:113773818 chr13:113773820 . . 0 23 hm5C_associated_SNPs_87380 0 0 2 GTF2F1 POSTAR2 ENCODE chr13:113773792-113773883
64251 chr15 22997855 22997855 1 + G A HNSC 22997852 + 22997832 22997872 41 TCCTTTCCAGAACATCTTGCCGCGAGTCCATGTGAAAGGTG TCCTTTCCAGAACATCTTGCCGCAAGTCCATGTGAAAGGTG < 41bp 0.790559283657117 0.577762756971063 0.24020952 0.09914601 prediction 0.425593053372109 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22997852 chr15:22997855 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_87383 0 0 7 BUD13 POSTAR2 ENCODE chr15:22997822-22997918
64251 chr3 183906570 183906570 1 + A C LUSC 183906569 + 183906549 183906589 41 GGCGGAGGGCTCTGAAGCTGCAGAGCTGGCAGAAATCTATG GGCGGAGGGCTCTGAAGCTGCCGAGCTGGCAGAAATCTATG < 41bp 0.712794833308633 0.441986056746274 0.8118502 0.54310703 prediction 0.425589666617266 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906569 chr3:183906570 synonymous SNV . 0 22 hm5C_associated_SNPs_87384 0 0 3 BUD13 POSTAR2 ENCODE chr3:183906534-183906572
64251 chr1 110775744 110775744 1 + G A rs115357778 110775741 + 110775721 110775761 41 GGAAAATCTCCCATGCGACCCTCGGGGCCCAGAGCCATCTG GGAAAATCTCCCATGCGACCCTCAGGGCCCAGAGCCATCTG < 41bp 0.759781736239781 0.546987172769151 0.16120109 0.020724416 prediction 0.425589126941259 Functional Loss - KCNC4 ENSG00000116396 UTR3 Human protein_coding chr1:110775741 chr1:110775744 . . 0 24 hm5C_associated_SNPs_87385 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:110775733-110775783
64251 chr2 220379517 220379517 1 + G A SKCM 220379514 + 220379494 220379534 41 GAAACCCAAGGAGAAGGAGGCAGGGGATGAGCAGAGCCTCC GAAACCCAAGGAGAAGGAGGCAGAGGATGAGCAGAGCCTCC < 41bp 0.803245406926215 0.590454006151251 0.9158709 0.8980882 prediction 0.42558280154993 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379514 chr2:220379517 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_87387 0 0 1 ZNF622 POSTAR2 ENCODE chr2:220379482-220379533
64251 chr16 20787240 20787240 1 + T C rs5713 20787239 + 20787219 20787259 41 TGCGATGGAGTTTTGAGGAACTGGGATCTCTGTCCAGAAAA TGCGATGGAGTTTTGAGGAACCGGGATCTCTGTCCAGAAAA < 41bp 0.79752790755272 0.584738016330574 0.47472668 0.544234 prediction 0.425579782444292 Functional Loss - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787239 chr16:20787240 nonsynonymous SNV 0.971 4 22 hm5C_associated_SNPs_87389 0 0 3 IGF2BP1 POSTAR2 ENCODE chr16:20787240-20787355
64251 chr14 73407053 73407053 1 + C T UCEC 73407050 + 73407030 73407070 41 AGGAGATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAA AGGAGATGGAGAGCAAGAGACTGTGGCTGCTCCAGGAAGAA < 41bp 0.760665130728115 0.54787586769308 0.47689146 0.25526276 prediction 0.425578526070069 Functional Loss - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73407050 chr14:73407053 nonsynonymous SNV 0.576 1 24 hm5C_associated_SNPs_87390 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:73407047-73407071
64251 chr4 1283680 1283680 1 + C T rs201086420 1283678 + 1283658 1283698 41 GCGCTCGCGCGTCCCCCGCCCGCTAATGTTTTGGCCGCTTC GCGCTCGCGCGTCCCCCGCCCGTTAATGTTTTGGCCGCTTC < 41bp 0.77811183685401 0.5653249599507 0.21399045 0.114236 prediction 0.42557375380662 Functional Loss - MAEA ENSG00000090316 UTR5 Human protein_coding chr4:1283678 chr4:1283680 . . 0 23 hm5C_associated_SNPs_87392 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:1283680-1283681
64251 chr19 16631002 16631002 1 - G A HNSC 16631005 - 16630985 16631025 41 GTCCCGGTCCAAGTCGTACTCCCCAGGAAGAAGACGCCGGT GTCCCGGTCCAAGTCGTACTCCCTAGGAAGAAGACGCCGGT < 41bp 0.737984255356412 0.525198388760618 0.2415112 0.24267042 prediction 0.425571733191588 Functional Loss - CHERP ENSG00000085872 CDS Human protein_coding chr19:16631005 chr19:16631002 nonsynonymous SNV 0.545 0 24 hm5C_associated_SNPs_87393 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:16630991-16631017
64251 chr3 32933082 32933082 1 + C T PRAD 32933079 + 32933059 32933099 41 GCACAGGCAATGGGCAGTTCCTGCGCCCACAAGGGGTAGCT GCACAGGCAATGGGCAGTTCCTGTGCCCACAAGGGGTAGCT < 41bp 0.712779866437458 0.495589626784854 0.07999849 0.13225666 prediction 0.425559732874916 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32933079 chr3:32933082 nonsynonymous SNV 0.930 4 24 hm5C_associated_SNPs_87397 0 0 3 LIN28A POSTAR2 GSE39873,GSM980593 chr3:32933080-32933100
64251 chr17 19451355 19451355 1 + G A rs150632967 19451352 + 19451332 19451372 41 TGATCCTGCAGCGGAGTGCGCTCGTCCTGCTCCTCTGCTGC TGATCCTGCAGCGGAGTGCGCTCATCCTGCTCCTCTGCTGC < 41bp 0.712774454149583 0.455148133160418 0.088799864 0.07177237 prediction 0.425548908299165 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19451352 chr17:19451355 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_87402 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:19451355-19451356
64251 chr17 19451353 19451353 1 + T C ESCA 19451352 + 19451332 19451372 41 TGATCCTGCAGCGGAGTGCGCTCGTCCTGCTCCTCTGCTGC TGATCCTGCAGCGGAGTGCGCCCGTCCTGCTCCTCTGCTGC < 41bp 0.712774454149583 0.46082773940452 0.088799864 0.06165743 prediction 0.425548908299165 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19451352 chr17:19451353 nonsynonymous SNV 0.003 4 22 hm5C_associated_SNPs_87403 0 0 3 PPIG POSTAR2 ENCODE chr17:19451294-19451358
64251 chr17 19451354 19451354 1 + C T UCEC 19451352 + 19451332 19451372 41 TGATCCTGCAGCGGAGTGCGCTCGTCCTGCTCCTCTGCTGC TGATCCTGCAGCGGAGTGCGCTTGTCCTGCTCCTCTGCTGC < 41bp 0.712774454149583 0.438860126283009 0.088799864 0.07988343 prediction 0.425548908299165 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19451352 chr17:19451354 synonymous SNV . 0 23 hm5C_associated_SNPs_87404 0 0 3 PPIG POSTAR2 ENCODE chr17:19451294-19451358
64251 chr6 96999380 96999380 1 + G T UCEC 96999378 + 96999358 96999398 41 TTACAAAACTCCATAACTCTCTGAATGAAAAGGTAAGTAAA TTACAAAACTCCATAACTCTCTTAATGAAAAGGTAAGTAAA < 41bp 0.712770311602895 0.397102355783953 0.12797982 0.052514613 prediction 0.42554062320579 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96999378 chr6:96999380 synonymous SNV . 0 23 hm5C_associated_SNPs_87408 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:96999354-96999380
64251 chr12 53453905 53453905 1 + G A rs114172228 53453902 + 53453882 53453922 41 CAGCCCTGGTGCCCACTCCCCACGGGCTGGCTCCATTTCCC CAGCCCTGGTGCCCACTCCCCACAGGCTGGCTCCATTTCCC < 41bp 0.7127687955025 0.459402812852991 0.5521614 0.2921821 prediction 0.425537591005 Functional Loss - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453902 chr12:53453905 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_87410 0 0 2 BUD13 POSTAR2 ENCODE chr12:53453871-53453974
64251 chr3 150127374 150127374 1 + G T COAD 150127370 + 150127350 150127390 41 GCTTAACAATGTTGGGGATGCGGAGACTCCCGGGACCGTCT GCTTAACAATGTTGGGGATGCGGATACTCCCGGGACCGTCT < 41bp 0.726312804576365 0.513544158443786 0.89345217 0.87862885 prediction 0.425537292265159 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127370 chr3:150127374 nonsynonymous SNV 0.982 2 25 hm5C_associated_SNPs_87411 0 0 5 AARS POSTAR2 ENCODE chr3:150127353-150127396
64251 chr14 105958614 105958614 1 + G A SKCM 105958611 + 105958591 105958631 41 AGCAGATGCTGGCCCAGGCCCGAGTGCCTCTGGGTGACGAG AGCAGATGCTGGCCCAGGCCCGAATGCCTCTGGGTGACGAG < 41bp 0.712755911160109 0.456572313588405 0.39666092 0.33241522 prediction 0.425511822320219 Functional Loss - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958611 chr14:105958614 nonsynonymous SNV 0.029 3 24 hm5C_associated_SNPs_87424 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr14:105958612-105958634
64251 chr17 40835917 40835917 1 + C T BRCA 40835914 + 40835894 40835934 41 CTCCTACTACAGTCTCCTTACTGCGCCGAGATTCGCCAGGC CTCCTACTACAGTCTCCTTACTGTGCCGAGATTCGCCAGGC < 41bp 0.724497152178807 0.511742667808495 0.734607 0.5345476 prediction 0.425508968740623 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40835914 chr17:40835917 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_87426 0 0 1 PPIG POSTAR2 ENCODE chr17:40835917-40835939
64251 chr19 17306023 17306023 1 + C T SARC 17306021 + 17306001 17306041 41 CCTGGACAGCAGGGTCAGCCCACCGGCCCCTGGCAGCGCCC CCTGGACAGCAGGGTCAGCCCATCGGCCCCTGGCAGCGCCC < 41bp 0.712753590840352 0.456354166918431 0.31859875 0.23869702 prediction 0.425507181680704 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17306021 chr19:17306023 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_87430 0 0 2 BUD13 POSTAR2 ENCODE chr19:17305981-17306044
64251 chr2 85617913 85617913 1 + G A rs17850709 85617910 + 85617890 85617930 41 AGTATTGGCCAAGAAGAGCCCACGGCGGCTGCTCAAGACCC AGTATTGGCCAAGAAGAGCCCACAGCGGCTGCTCAAGACCC < 41bp 0.807345310079879 0.594593120704722 0.2910583 0.19755444 prediction 0.425504378750314 Functional Loss - ELMOD3 ENSG00000115459 CDS Human protein_coding chr2:85617910 chr2:85617913 nonsynonymous SNV 0.794 0 24 hm5C_associated_SNPs_87432 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr2:85617889-85617919
64251 chr2 132021698 132021698 1 + G A SKCM 132021695 + 132021675 132021715 41 CGGGAACTGCCTGACTACCTCATGAAGATCCTCACCGAGCG CGGGAACTGCCTGACTACCTCATAAAGATCCTCACCGAGCG < 41bp 0.712741876428932 0.475059925527524 0.38107422 0.3045228 prediction 0.425483752857864 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021695 chr2:132021698 nonsynonymous SNV 0.068 1 24 hm5C_associated_SNPs_87439 0 0 1 EIF3H POSTAR2 ENCODE chr2:132021649-132021712
64251 chr21 47987453 47987453 1 + G A LAML 47987450 + 47987430 47987470 41 AGGGGTGATCCCTATCAACTCTCGGGGTGAGAAGCAGCGCA AGGGGTGATCCCTATCAACTCTCAGGGTGAGAAGCAGCGCA < 41bp 0.756549345833557 0.543810025489274 0.4088789 0.087322235 prediction 0.425478640688568 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47987450 chr21:47987453 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_87443 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:47987440-47987465
64251 chr4 128815008 128815008 1 + C T STAD 128815005 + 128814985 128815025 41 GGTCATGCATAGTGCTGCTTCTCCAACACAGGCACCAATCC GGTCATGCATAGTGCTGCTTCTCTAACACAGGCACCAATCC < 41bp 0.76174240942225 0.549005775185695 0.9487386 0.9046413 prediction 0.425473268473111 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128815005 chr4:128815008 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_87445 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr4:128815001-128815033
64251 chr2 216177064 216177064 1 + G T rs549768382 216177062 + 216177042 216177082 41 GCCCGCCTTAGAGCAGCTCGCGGGTGTAAGACCTGGGGAGG GCCCGCCTTAGAGCAGCTCGCGTGTGTAAGACCTGGGGAGG < 41bp 0.890119900664244 0.677383762706089 0.9239212 0.35517812 prediction 0.42547227591631 Functional Loss - ATIC ENSG00000138363;ENSG00000138363 UTR5;UTR3 Human other chr2:216177062 chr2:216177064 . . 0 23 hm5C_associated_SNPs_87446 0 0 3 DDX3X POSTAR2 ENCODE chr2:216177011-216177113
64251 chr11 35685046 35685046 1 + C T UCEC 35685043 + 35685023 35685063 41 GATGAGGAGAGTGAAGAAGACAGCGAGGAAGAAATGGAGGA GATGAGGAGAGTGAAGAAGACAGTGAGGAAGAAATGGAGGA < 41bp 0.732119432594298 0.519386738268794 0.17011091 0.12660444 prediction 0.425465388651008 Functional Loss - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35685043 chr11:35685046 synonymous SNV . 0 24 hm5C_associated_SNPs_87449 0 0 33 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:35684985-35685065
64251 chr3 169801827 169801827 1 + G T LUAD 169801824 + 169801804 169801844 41 TACGTCAAACAAACCAGCCCCTAGATGTTAACTATCTGCTA TACGTCAAACAAACCAGCCCCTATATGTTAACTATCTGCTA < 41bp 0.712730917024767 0.339818012078989 0.08142027 0.10859707 prediction 0.425461834049534 Functional Loss - GPR160 ENSG00000173890 CDS Human protein_coding chr3:169801824 chr3:169801827 nonsynonymous SNV 0.012 3 24 hm5C_associated_SNPs_87450 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:169801813-169801851
64251 chr19 5667092 5667092 1 + C T SARC 5667090 + 5667070 5667110 41 GCCATGGAGGACCAGAGCGCCACGGCCGGGACTCCCGCGAT GCCATGGAGGACCAGAGCGCCATGGCCGGGACTCCCGCGAT < 41bp 0.844657466293381 0.631931750104643 0.7920711 0.82080126 prediction 0.425451432377476 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667090 chr19:5667092 synonymous SNV . 0 23 hm5C_associated_SNPs_87456 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:5666897-5667105
64251 chr14 75369379 75369379 1 + T C rs709887 75369378 + 75369358 75369398 41 GGTATACTATAGAGAAACCCCTGGGGACCATGTGATTAAGT GGTATACTATAGAGAAACCCCCGGGGACCATGTGATTAAGT < 41bp 0.721848250376171 0.509122702712218 0.12049034 0.20886269 prediction 0.425451095327907 Functional Loss - DLST ENSG00000119689 UTR3 Human protein_coding chr14:75369378 chr14:75369379 . . 0 22 hm5C_associated_SNPs_87457 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:75369342-75369389
64251 chr16 57789326 57789326 1 + G A UCEC 57789323 + 57789303 57789343 41 TGTCACAGATCCGCAAAGGCCACGACACCATGTGTGTGGTG TGTCACAGATCCGCAAAGGCCACAACACCATGTGTGTGGTG < 41bp 0.796378607089967 0.583654893293975 0.040838778 0.026800096 prediction 0.425447427591984 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57789323 chr16:57789326 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_87462 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57789301-57789336
64251 chr10 75519464 75519464 1 + G A KICH 75519461 + 75519441 75519481 41 CTTCAGCCCTATGGCCCTCCCCCGACAAGTGCACAGGTGGC CTTCAGCCCTATGGCCCTCCCCCAACAAGTGCACAGGTGGC < 41bp 0.712723031247897 0.470062176262111 0.14335376 0.20907226 prediction 0.425446062495793 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519461 chr10:75519464 synonymous SNV . 0 24 hm5C_associated_SNPs_87463 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75519451-75519489
64251 chr13 39612858 39612858 1 + C T COAD 39612856 + 39612836 39612876 41 GCATTCGCGTTTTTGTGGCTCTCCAGTGAGTTGGGTAGTGA GCATTCGCGTTTTTGTGGCTCTTCAGTGAGTTGGGTAGTGA < 41bp 0.712722289923691 0.448079570098096 0.93272924 0.27809685 prediction 0.425444579847382 Functional Loss - NHLRC3 ENSG00000188811 CDS Human protein_coding chr13:39612856 chr13:39612858 nonsynonymous SNV 0.016 0 23 hm5C_associated_SNPs_87465 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr13:39612837-39612859
64251 chr9 133911635 133911635 1 + G C KIRC 133911634 + 133911614 133911654 41 CGGTGCCAGCACAACACCACCGGCACAGACTGTGAGCGCTG CGGTGCCAGCACAACACCACCCGCACAGACTGTGAGCGCTG < 41bp 0.71271807175843 0.389744622307953 0.26529437 0.033068776 prediction 0.425436143516859 Functional Loss - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133911634 chr9:133911635 nonsynonymous SNV 0.048 5 22 hm5C_associated_SNPs_87469 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:133911620-133911640
64251 chr10 51580916 51580916 1 + G A BLCA 51580913 + 51580893 51580933 41 TCAATTGTCTTACTCATCAACTGGAGTGTACCCAAAACAAA TCAATTGTCTTACTCATCAACTGAAGTGTACCCAAAACAAA < 41bp 0.712717358900006 0.487311678103682 0.5516404 0.40404192 prediction 0.425434717800012 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51580913 chr10:51580916 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_87470 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:51580892-51580916
64251 chr1 150469292 150469292 1 + G A BRCA 150469289 + 150469269 150469309 41 GCTATTCCTGACCCCAGGAACAGGAGCTCTTCTTCTTCCAT GCTATTCCTGACCCCAGGAACAGAAGCTCTTCTTCTTCCAT < 41bp 0.794913860838324 0.582201546428797 0.89959466 0.87517405 prediction 0.425424628819053 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150469289 chr1:150469292 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87473 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:150469292-150469319
64251 chrX 136649762 136649762 1 + G A rs10126585 136649759 + 136649739 136649779 41 TGCTACTGGGAGGAGTGCCCCCGGGAGGGCAAGTCTTTCAA TGCTACTGGGAGGAGTGCCCCCGAGAGGGCAAGTCTTTCAA < 41bp 0.712710876768879 0.465574361583508 0.65605026 0.16851264 prediction 0.425421753537759 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649759 chrX:136649762 synonymous SNV . 0 24 hm5C_associated_SNPs_87476 2 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:136649760-136649780
64251 chr5 235364 235364 1 + C T rs35277230 235361 + 235341 235381 41 ATTTCAGAGACAGCCATGATCTTCGCTGGCGTGGACGTCAC ATTTCAGAGACAGCCATGATCTTTGCTGGCGTGGACGTCAC < 41bp 0.764596842382393 0.551886088375552 0.3709147 0.28820065 prediction 0.425421508013683 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:235361 chr5:235364 synonymous SNV . 0 24 hm5C_associated_SNPs_87477 7 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:235351-235372
64251 chr7 44806116 44806116 1 + C T BLCA 44806113 + 44806093 44806133 41 CCCCTCCAGGTCCCCAGCTGCACCATTCAAACCCTCCCCCA CCCCTCCAGGTCCCCAGCTGCACTATTCAAACCCTCCCCCA < 41bp 0.725660792774817 0.512950095448584 0.06467283 0.09198651 prediction 0.425421394652467 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806113 chr7:44806116 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_87478 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:44806061-44806133
64251 chr1 3624148 3624148 1 + G A UCEC 3624145 + 3624125 3624165 41 CTGCTGAGCAGCACCATGGACCAGATGAGCAGCCGCGCGGC CTGCTGAGCAGCACCATGGACCAAATGAGCAGCCGCGCGGC < 41bp 0.764471561732173 0.551761951837067 0.7978571 0.34187838 prediction 0.425419219790212 Functional Loss - TP73 ENSG00000078900 CDS Human protein_coding chr1:3624145 chr1:3624148 synonymous SNV . 0 24 hm5C_associated_SNPs_87479 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:3624147-3624148
64251 chrX 100667035 100667035 1 + G T LGG 100667033 + 100667013 100667053 41 GTGAAGGTCAGGGGCCTACCCTGGTCCTGCTCAGCCGATGA GTGAAGGTCAGGGGCCTACCCTTGTCCTGCTCAGCCGATGA < 41bp 0.905045129152957 0.692366329605991 0.5558084 0.24233228 prediction 0.425357599093932 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667033 chrX:100667035 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_87498 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chrX:100667023-100667057
64251 chr3 180686016 180686016 1 + G A LUSC 180686013 + 180685993 180686033 41 GGGTCGAGGTCGTGGTGGACCACGTGGTGGCAAATCCTCCA GGGTCGAGGTCGTGGTGGACCACATGGTGGCAAATCCTCCA < 41bp 0.772468807882873 0.55979428259778 0.34856537 0.30683553 prediction 0.425349050570187 Functional Loss - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180686013 chr3:180686016 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_87499 0 0 2 LIN28B POSTAR2 ENCODE chr3:180686002-180686043
64251 chr17 21205521 21205521 1 + G T BRCA 21205518 + 21205498 21205538 41 ACAAGTTCTACCGGAAGGTGCTGGATAAAAACATGACAATT ACAAGTTCTACCGGAAGGTGCTGTATAAAAACATGACAATT < 41bp 0.712667700873988 0.31517437953205 0.2895964 0.16221699 prediction 0.425335401747977 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21205518 chr17:21205521 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_87502 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:21205483-21205524
64251 chr17 21205520 21205520 1 + G T UCEC 21205518 + 21205498 21205538 41 ACAAGTTCTACCGGAAGGTGCTGGATAAAAACATGACAATT ACAAGTTCTACCGGAAGGTGCTTGATAAAAACATGACAATT < 41bp 0.712667700873988 0.369652095202136 0.2895964 0.069805235 prediction 0.425335401747977 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21205518 chr17:21205520 synonymous SNV . 0 23 hm5C_associated_SNPs_87503 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:21205483-21205524
64251 chr12 4714247 4714247 1 + A T rs200900846 4714243 + 4714223 4714263 41 GAGGTGGAGCAGCTGGCCTGCATCATGGAGGTACGCGGAGG GAGGTGGAGCAGCTGGCCTGCATCTTGGAGGTACGCGGAGG < 41bp 0.712667153976555 0.377999710645873 0.3247295 0.3039164 prediction 0.425334307953109 Functional Loss - DYRK4 ENSG00000010219;ENSG00000272921 CDS Human other chr12:4714243 chr12:4714247 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_87505 0 0 2 GRWD1 POSTAR2 ENCODE chr12:4714130-4714311
64251 chr3 5246813 5246813 1 + G T SARC 5246810 + 5246790 5246830 41 AAGCAGAGTGGCCTGGGTGCCGGGCTGGACTCCTTCTATGA AAGCAGAGTGGCCTGGGTGCCGGTCTGGACTCCTTCTATGA < 41bp 0.712666412882647 0.314174867054694 0.7843548 0.08857423 prediction 0.425332825765294 Functional Loss - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5246810 chr3:5246813 synonymous SNV . 0 24 hm5C_associated_SNPs_87506 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:5246790-5246824
64251 chr20 23351038 23351038 1 + C T UCEC 23351036 + 23351016 23351056 41 GAGCTGACCCCACAGACAGACTCGATGCCCACACAGCTTCA GAGCTGACCCCACAGACAGACTTGATGCCCACACAGCTTCA < 41bp 0.860486951222612 0.647823112936947 0.31197482 0.022994608 prediction 0.42532767657133 Functional Loss - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23351036 chr20:23351038 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_87508 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:23351021-23351074
64251 chr19 36037919 36037919 1 + C T UCEC 36037916 + 36037896 36037936 41 TACATCCAGATGAGCATAGACTCCAACATCAGTCTGGTAGG TACATCCAGATGAGCATAGACTCTAACATCAGTCTGGTAGG < 41bp 0.712662827072834 0.483151650452762 0.9559413 0.9238602 prediction 0.425325654145668 Functional Loss - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36037916 chr19:36037919 synonymous SNV . 0 24 hm5C_associated_SNPs_87509 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36037870-36037921
64251 chr1 9661266 9661266 1 + G T HNSC 9661264 + 9661244 9661284 41 ACCACCGCGCTGTATGGGGCCAGCGGACACTTCGCCCCAGG ACCACCGCGCTGTATGGGGCCATCGGACACTTCGCCCCAGG < 41bp 0.712661575492967 0.347043213768931 0.8566056 0.38044515 prediction 0.425323150985935 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9661264 chr1:9661266 nonsynonymous SNV 0.055 1 23 hm5C_associated_SNPs_87510 0 0 1 NOL12 POSTAR2 ENCODE chr1:9661248-9661351
64251 chr14 105878224 105878224 1 + G C rs72711585 105878223 + 105878203 105878243 41 TGCCTTTCCTTGGGGGCCCACGGTGGGGGCAGCCTCTGCGC TGCCTTTCCTTGGGGGCCCACCGTGGGGGCAGCCTCTGCGC < 41bp 0.712655647682073 0.394806945207264 0.91931665 0.5577577 prediction 0.425311295364146 Functional Loss - TEX22 ENSG00000226174 UTR3 Human protein_coding chr14:105878223 chr14:105878224 . . 0 22 hm5C_associated_SNPs_87514 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:105878189-105878225
64251 chr11 63670173 63670173 1 + G T KIRC 63670171 + 63670151 63670191 41 AGGAGGACCGGGAGTCAGGGCGGAAAGCCAGCAGCACAGCC AGGAGGACCGGGAGTCAGGGCGTAAAGCCAGCAGCACAGCC < 41bp 0.712647404661093 0.359106892015864 0.73666537 0.5901246 prediction 0.425294809322187 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63670171 chr11:63670173 synonymous SNV . 0 23 hm5C_associated_SNPs_87522 0 0 1 DDX24 POSTAR2 ENCODE chr11:63670124-63670181
64251 chr12 109935699 109935699 1 + G A BLCA 109935696 + 109935676 109935716 41 ACATCATGTCTGTGCCTGCTCTGGTGACTCATCTCAGCACA ACATCATGTCTGTGCCTGCTCTGATGACTCATCTCAGCACA < 41bp 0.807935326664869 0.595292112240894 0.17123497 0.03644824 prediction 0.42528642884795 Functional Loss - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109935696 chr12:109935699 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_87528 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:109935677-109935701
64251 chr3 48508122 48508122 1 + G A STAD 48508119 + 48508099 48508139 41 CTTTTTCGACATGGAGGCCACTGGCTTGCCCTTCTCCCAGC CTTTTTCGACATGGAGGCCACTGACTTGCCCTTCTCCCAGC < 41bp 0.813644623674714 0.601001615155122 0.22247002 0.038047254 prediction 0.425286017039184 Functional Loss - TREX1 ENSG00000213689 CDS Human protein_coding chr3:48508119 chr3:48508122 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_87529 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:48508109-48508141
64251 chr10 43882574 43882574 1 - G A rs544392837 43882577 - 43882557 43882597 41 TACAGTGGCCTCAGTGATGGCTACGGCTTCACCACCGACCT TACAGTGGCCTCAGTGATGGCTATGGCTTCACCACCGACCT < 41bp 0.727234207330381 0.514593899860633 0.042167008 0.07553813 prediction 0.425280614939495 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882577 chr10:43882574 synonymous SNV . 0 24 hm5C_associated_SNPs_87531 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882456-43882580
64251 chr5 633964 633964 1 + T C UCEC 633963 + 633943 633983 41 ATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGC ATGCGGATGACGAGGCAGTCCCGAACCTCATTGCAGAGTGC < 41bp 0.712634261356894 0.459747735070558 0.1971119 0.18266234 prediction 0.425268522713788 Functional Loss - CEP72 ENSG00000112877 CDS Human protein_coding chr5:633963 chr5:633964 nonsynonymous SNV 0.983 3 22 hm5C_associated_SNPs_87534 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:633908-633971
64251 chr6 117861920 117861920 1 + G T UCEC 117861917 + 117861897 117861937 41 AGATATGTGCGGGTTGTCCCCCAGACATGGCACCAGAGGAT AGATATGTGCGGGTTGTCCCCCATACATGGCACCAGAGGAT < 41bp 0.712633695297637 0.310719585668317 0.028793216 0.020431876 prediction 0.425267390595274 Functional Loss - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117861917 chr6:117861920 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_87536 0 0 1 PPIG POSTAR2 ENCODE chr6:117861880-117861975
64251 chr6 26370758 26370758 1 + C T STAD 26370755 + 26370735 26370775 41 TCTGTGATCATGAGAGGCGGCTCCGGGGAGGGTGTATCCTG TCTGTGATCATGAGAGGCGGCTCTGGGGAGGGTGTATCCTG < 41bp 0.75950279018613 0.54687295554747 0.5478201 0.29693425 prediction 0.425259669277321 Functional Loss - BTN3A2 ENSG00000186470 CDS Human protein_coding chr6:26370755 chr6:26370758 synonymous SNV . 0 24 hm5C_associated_SNPs_87541 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26370754-26370775
64251 chr19 50905726 50905726 1 + G A UCEC 50905723 + 50905703 50905743 41 CCCTCCAGGTTCATGGTGGACACGGACATCGTCGGCTGCAA CCCTCCAGGTTCATGGTGGACACAGACATCGTCGGCTGCAA < 41bp 0.801837013943032 0.589207726600036 0.3847888 0.31700075 prediction 0.425258574685992 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905723 chr19:50905726 synonymous SNV . 0 24 hm5C_associated_SNPs_87542 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:50905715-50905742
64251 chr10 76973799 76973799 1 + G A BLCA 76973796 + 76973776 76973816 41 AAGGTTTTGGGTTGGTGAAACTGGATGTGAAAACAAAGTCT AAGGTTTTGGGTTGGTGAAACTGAATGTGAAAACAAAGTCT < 41bp 0.712629221675993 0.469712147409643 0.42379457 0.32548457 prediction 0.425258443351986 Functional Loss - VDAC2 ENSG00000165637 CDS Human protein_coding chr10:76973796 chr10:76973799 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_87543 0 0 2 EFTUD2 POSTAR2 ENCODE chr10:76973796-76973819
64251 chr3 183881465 183881465 1 + C T STAD 183881463 + 183881443 183881483 41 AGAGTGGTGAAGGAGGAGATCTCGGATGACAATGCCAAGCT AGAGTGGTGAAGGAGGAGATCTTGGATGACAATGCCAAGCT < 41bp 0.852853002405235 0.640224535701747 0.6447212 0.15725526 prediction 0.425256933406975 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183881463 chr3:183881465 nonsynonymous SNV 0.976 3 23 hm5C_associated_SNPs_87545 0 0 3 PPIG POSTAR2 ENCODE chr3:183881439-183881470
64251 chr7 100779013 100779013 1 + G A COAD 100779010 + 100778990 100779030 41 TTTCAGACCAAGAGCCTCTCCACGTCGCGCAGGCGCTGCAG TTTCAGACCAAGAGCCTCTCCACATCGCGCAGGCGCTGCAG < 41bp 0.712621311876802 0.459887403304535 0.30381712 0.2860886 prediction 0.425242623753603 Functional Loss - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100779010 chr7:100779013 nonsynonymous SNV 0.004 3 24 hm5C_associated_SNPs_87553 0 0 5 BUD13 POSTAR2 ENCODE chr7:100778998-100779022
64251 chr12 31256924 31256924 1 + C T COAD 31256922 + 31256902 31256942 41 GAGTGCTGCCAGGACCCAGGCACAGGCGTTAGCTCCCGTAG GAGTGCTGCCAGGACCCAGGCATAGGCGTTAGCTCCCGTAG < 41bp 0.779977603443413 0.56735992486404 0.13247901 0.3290477 prediction 0.425235357158746 Functional Loss - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31256922 chr12:31256924 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_87554 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221663 chr12:31256920-31256940
64251 chr19 37203746 37203746 1 + C T SKCM 37203743 + 37203723 37203763 41 ACGAGGAGAAGAGCCATGGACATCATTTGCAGGTCATACCT ACGAGGAGAAGAGCCATGGACATTATTTGCAGGTCATACCT < 41bp 0.751000706968292 0.538390361903085 0.074904025 0.11572495 prediction 0.425220690130413 Functional Loss - ZNF567 ENSG00000189042 CDS Human protein_coding chr19:37203743 chr19:37203746 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_87561 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37203698-37203751
64251 chr17 78201687 78201687 1 + G A rs151155883 78201684 + 78201664 78201704 41 TGCTGAAGCTGATGCGGGACCACGTGCCTCCCGTCCACCCC TGCTGAAGCTGATGCGGGACCACATGCCTCCCGTCCACCCC < 41bp 0.829244859959148 0.616634519795174 0.31943226 0.07206723 prediction 0.425220680327948 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78201684 chr17:78201687 nonsynonymous SNV 0.069 1 24 hm5C_associated_SNPs_87562 0 0 3 GRWD1 POSTAR2 ENCODE chr17:78201639-78201748
64251 chr20 23424613 23424613 1 + T C rs3746736 23424612 + 23424592 23424632 41 ATAGTCACTGTGAAGATTGGCTGGACCAAATGCAAGAGGAA ATAGTCACTGTGAAGATTGGCCGGACCAAATGCAAGAGGAA < 41bp 0.77479632344751 0.562189726138448 0.29976648 0.23123756 prediction 0.425213194618123 Functional Loss - CSTL1 ENSG00000125823 CDS Human protein_coding chr20:23424612 chr20:23424613 nonsynonymous SNV 0.873 0 22 hm5C_associated_SNPs_87568 0 1 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:23424597-23424626
64251 chr14 65520043 65520043 1 + G A UCEC 65520040 + 65520020 65520060 41 GATGTGCTGCCAGTGCCCTGCGGGGGGGCTTCTGGATAAAC GATGTGCTGCCAGTGCCCTGCGGAGGGGCTTCTGGATAAAC < 41bp 0.81603229562558 0.603440507589855 0.89885473 0.7135885 prediction 0.425183576071449 Functional Loss - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65520040 chr14:65520043 nonsynonymous SNV 0.446 4 24 hm5C_associated_SNPs_87577 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:65520028-65520053
64251 chr1 109238743 109238743 1 + C T UCEC 109238741 + 109238721 109238761 41 ATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTC ATTATTTACCCTGAAGTTAACTTGAAAGCAAGTGATGGGTC < 41bp 0.770011859282748 0.55742149188935 0.7811738 0.22896028 prediction 0.425180734786796 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109238741 chr1:109238743 stopgain 0.999 1 23 hm5C_associated_SNPs_87579 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109238714-109238749
64251 chrX 153628150 153628150 1 + A C LUAD 153628146 + 153628126 153628166 41 TTTCTTCTCCCTACCTAGCCCTGGAGGCTGCCCGAATTTGT TTTCTTCTCCCTACCTAGCCCTGGCGGCTGCCCGAATTTGT < 41bp 0.712585711270532 0.300586148671435 0.070243925 0.051984966 prediction 0.425171422541065 Functional Loss - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628146 chrX:153628150 nonsynonymous SNV 0.983 3 25 hm5C_associated_SNPs_87583 0 0 8 DDX24 POSTAR2 ENCODE chrX:153628143-153628165
64251 chr7 101201748 101201748 1 + C T rs73413451 101201746 + 101201726 101201766 41 GGGACTTGCAGCCTCTGCCCCACGAGTTTGTCTCTCAGTGG GGGACTTGCAGCCTCTGCCCCATGAGTTTGTCTCTCAGTGG < 41bp 0.712582352791744 0.496192453068627 0.75048304 0.8782417 prediction 0.425164705583489 Functional Loss - COL26A1 ENSG00000160963 UTR3 Human protein_coding chr7:101201746 chr7:101201748 . . 0 23 hm5C_associated_SNPs_87584 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:101201719-101201761
64251 chr5 14508374 14508374 1 + A T COAD 14508370 + 14508350 14508390 41 GTCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGTGGCTGCAG GTCCCTCGGCTGCGCTGGCCCTCCTGGAGCAGTGGCTGCAG < 41bp 0.712580042482615 0.398023717918667 0.9523548 0.11121887 prediction 0.425160084965231 Functional Loss - TRIO ENSG00000038382 CDS Human protein_coding chr5:14508370 chr5:14508374 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_87587 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:14508350-14508386
64251 chr1 54418017 54418017 1 + T C rs146430406 54418016 + 54417996 54418036 41 TGGCTTTCCTGAGCAGATTGCTGAAAAGCTGTTCTCTGCTG TGGCTTTCCTGAGCAGATTGCCGAAAAGCTGTTCTCTGCTG < 41bp 0.818353699698734 0.605775576215138 0.23649344 0.27270693 prediction 0.42515624696719 Functional Loss - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54418016 chr1:54418017 synonymous SNV . 0 22 hm5C_associated_SNPs_87589 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:54418003-54418035
64251 chr1 1469782 1469782 1 + G C rs17161064 1469778 + 1469758 1469798 41 ACTGTGAGGGTGGGTGCTGGCTGAGCCCCCGGGGCAGCAGG ACTGTGAGGGTGGGTGCTGGCTGACCCCCCGGGGCAGCAGG < 41bp 0.712574867661766 0.438538737957274 0.23334128 0.08175731 prediction 0.425149735323531 Functional Loss - ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469778 chr1:1469782 . . 0 25 hm5C_associated_SNPs_87591 0 0 5 DDX55 POSTAR2 ENCODE chr1:1469693-1469786
64251 chr18 8786015 8786015 1 + C T ESCA 8786013 + 8785993 8786033 41 GAGCCTGCGCCTCCGAGCCGCGCGGGAGCTGCACCGCCGCG GAGCCTGCGCCTCCGAGCCGCGTGGGAGCTGCACCGCCGCG < 41bp 0.810430111128316 0.597855598078156 0.8905577 0.9057113 prediction 0.425149026100321 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8786013 chr18:8786015 nonsynonymous SNV 0.266 1 23 hm5C_associated_SNPs_87592 0 0 1 FXR2 POSTAR2 ENCODE chr18:8785948-8786077
64251 chr5 121362771 121362771 1 + C T GBM 121362768 + 121362748 121362788 41 CAAGCAGAAGGCGAAAAGAACAGCAATCTAATATTGCTGTG CAAGCAGAAGGCGAAAAGAACAGTAATCTAATATTGCTGTG < 41bp 0.715414174297416 0.502839684817589 0.605972 0.68172526 prediction 0.425148978959654 Functional Loss - SRFBP1 ENSG00000151304 CDS Human protein_coding chr5:121362768 chr5:121362771 stopgain 0.512 0 24 hm5C_associated_SNPs_87593 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:121362732-121362779
64251 chr11 65393566 65393566 1 + C T rs11227242 65393564 + 65393544 65393584 41 TGGCCAGGCCTGGGCAGTGGCTCGGGCTGCAGCCTGGCTGG TGGCCAGGCCTGGGCAGTGGCTTGGGCTGCAGCCTGGCTGG < 41bp 0.712572796385713 0.483699755656355 0.8264394 0.7375605 prediction 0.425145592771427 Functional Loss - PCNX3 ENSG00000197136 intronic Human protein_coding chr11:65393564 chr11:65393566 . . 0 23 hm5C_associated_SNPs_87594 0 0 1 XRN2 POSTAR2 ENCODE chr11:65393517-65393573
64251 chr19 15807841 15807841 1 + C T rs142786593 15807839 + 15807819 15807859 41 GGAAGCTGGAATTGATCATGCGCGCCGAGGGCGGGCTTTGG GGAAGCTGGAATTGATCATGCGTGCCGAGGGCGGGCTTTGG < 41bp 0.712571049321814 0.457504327457282 0.43280017 0.4823686 prediction 0.425142098643628 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807839 chr19:15807841 synonymous SNV . 0 23 hm5C_associated_SNPs_87596 0 0 2 LSM11 POSTAR2 ENCODE chr19:15807840-15807932
64251 chr19 15807842 15807842 1 + G A rs189002430 15807839 + 15807819 15807859 41 GGAAGCTGGAATTGATCATGCGCGCCGAGGGCGGGCTTTGG GGAAGCTGGAATTGATCATGCGCACCGAGGGCGGGCTTTGG < 41bp 0.712571049321814 0.463742356595928 0.43280017 0.2755229 prediction 0.425142098643628 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807839 chr19:15807842 nonsynonymous SNV 0.089 0 24 hm5C_associated_SNPs_87597 0 0 2 LSM11 POSTAR2 ENCODE chr19:15807840-15807932
64251 chr21 34922087 34922087 1 + G T PAAD 34922085 + 34922065 34922105 41 ATCTGAGACCAATGAATCCCCTGCAGTTGTGCTAGAACCTC ATCTGAGACCAATGAATCCCCTTCAGTTGTGCTAGAACCTC < 41bp 0.712565994418015 0.393246677471754 0.020535171 0.08919418 prediction 0.42513198883603 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922085 chr21:34922087 nonsynonymous SNV 0.243 1 23 hm5C_associated_SNPs_87601 0 0 35 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:34921778-34922225
64251 chr1 48699331 48699331 1 + G A BRCA 48699328 + 48699308 48699348 41 GCCATTACTTCTTCCACAGACGAGGTGGGCTGCGTGGACCC GCCATTACTTCTTCCACAGACGAAGTGGGCTGCGTGGACCC < 41bp 0.805472882325373 0.592906942880132 0.29791555 0.21176976 prediction 0.425131878890483 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48699328 chr1:48699331 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_87603 0 0 4 GRWD1 POSTAR2 ENCODE chr1:48699326-48699365
64251 chr4 184368272 184368272 1 + G A UCEC 184368269 + 184368249 184368289 41 TTGAGGCTCTGAAAGCAACACTGGATGTATTTTTTGTCCCA TTGAGGCTCTGAAAGCAACACTGAATGTATTTTTTGTCCCA < 41bp 0.730533891100733 0.517976448348335 0.22083038 0.09361902 prediction 0.425114885504796 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184368269 chr4:184368272 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87611 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr4:184368239-184368291
64251 chr18 597010 597010 1 + G A rs540012461 597007 + 596987 597027 41 CACCCTGCGTCACCTGCAGGCCCGGGCCGCGGGGTTGGTTT CACCCTGCGTCACCTGCAGGCCCAGGCCGCGGGGTTGGTTT < 41bp 0.712553966179237 0.487939812600971 0.053679466 0.018907487 prediction 0.425107932358475 Functional Loss - CLUL1 ENSG00000079101 UTR5 Human protein_coding chr18:597007 chr18:597010 . . 0 24 hm5C_associated_SNPs_87614 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr18:597010-597011
64251 chr8 21891772 21891772 1 + G T LUAD 21891769 + 21891749 21891789 41 AAAGGCTGGTGCCCCAGAAGCAGGCGAGCGTGGCTAAGGTG AAAGGCTGGTGCCCCAGAAGCAGTCGAGCGTGGCTAAGGTG < 41bp 0.712550004900098 0.306964461772451 0.8841598 0.30175114 prediction 0.425100009800196 Functional Loss - NPM2 ENSG00000158806 CDS Human protein_coding chr8:21891769 chr8:21891772 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_87616 0 0 4 BUD13 POSTAR2 ENCODE chr8:21891747-21891782
64251 chr19 48967822 48967822 1 + G A HNSC 48967819 + 48967799 48967839 41 CGGTCTGCAGTGCTAAGGAGCTGGATGAACGGGCAGAGCAG CGGTCTGCAGTGCTAAGGAGCTGAATGAACGGGCAGAGCAG < 41bp 0.818206880913377 0.60565945345626 0.718529 0.43922767 prediction 0.425094854914234 Functional Loss - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967819 chr19:48967822 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_87618 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:48967766-48967845
64251 chr1 150469053 150469053 1 + G T UCEC 150469050 + 150469030 150469070 41 ACAACAGAATTGCTGAGGGTCTGGGAAGCATGGAGGGAGGA ACAACAGAATTGCTGAGGGTCTGTGAAGCATGGAGGGAGGA < 41bp 0.712541997618592 0.310752865420902 0.37964112 0.12402895 prediction 0.425083995237184 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150469050 chr1:150469053 nonsynonymous SNV 0.802 4 24 hm5C_associated_SNPs_87622 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:150469036-150469072
64251 chr13 52330513 52330513 1 + T C UCEC 52330512 + 52330492 52330532 41 GCCGTCTGTGGCAAGTGCAGCTCCAAGCGCTCCTCCATCCC GCCGTCTGTGGCAAGTGCAGCCCCAAGCGCTCCTCCATCCC < 41bp 0.712540710053332 0.431541286879049 0.8172947 0.032475322 prediction 0.425081420106664 Functional Loss - WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52330512 chr13:52330513 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_87623 0 0 4 BUD13 POSTAR2 ENCODE chr13:52330453-52330523
64251 chr21 15599221 15599221 1 + A T SKCM 15599219 + 15599199 15599239 41 AGCAGTGGCATGTGTATAATCCAGTGCTGCAGCTTCCTTAC AGCAGTGGCATGTGTATAATCCTGTGCTGCAGCTTCCTTAC < 41bp 0.718068817971054 0.505530378693953 0.4380274 0.18498152 prediction 0.425076878554202 Functional Loss - RBM11 ENSG00000185272 CDS Human protein_coding chr21:15599219 chr21:15599221 synonymous SNV . 0 23 hm5C_associated_SNPs_87624 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr21:15599220-15599243
64251 chr5 175717239 175717239 1 + C T CESC 175717237 + 175717217 175717257 41 GAGAGCCTCACCATGTCCACCACGAGCCTCCTCATGCCCAC GAGAGCCTCACCATGTCCACCATGAGCCTCCTCATGCCCAC < 41bp 0.855158981102486 0.64262911462158 0.10348901 0.051948458 prediction 0.425059732961812 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717237 chr5:175717239 stopgain 1.000 0 23 hm5C_associated_SNPs_87627 0 0 4 AGGF1 POSTAR2 ENCODE chr5:175717187-175717312
64251 chr17 5250109 5250109 1 + G T UCEC 5250106 + 5250086 5250126 41 TTAAAGAACTGAATCATTATCTGGAAGCTGAGAAATCTTGT TTAAAGAACTGAATCATTATCTGTAAGCTGAGAAATCTTGT < 41bp 0.712528797700526 0.34313120786507 0.35780215 0.29705495 prediction 0.425057595401052 Functional Loss - RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5250106 chr17:5250109 stopgain 1.000 1 24 hm5C_associated_SNPs_87628 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:5250082-5250220
64251 chr9 125865461 125865461 1 + C T ESCA 125865458 + 125865438 125865478 41 AACACTGAGCTCCATAAAGACAGCAACCGGGGTTCAAGGGA AACACTGAGCTCCATAAAGACAGTAACCGGGGTTCAAGGGA < 41bp 0.732751068190704 0.520225062757649 0.23861796 0.31670648 prediction 0.425052010866109 Functional Loss - RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125865458 chr9:125865461 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_87629 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:125865421-125865470
64251 chr8 75276336 75276336 1 + G C LUAD 75276335 + 75276315 75276355 41 GCAAGGAGAAACTGGGGAAACGGAAAGCGACCAAACTTGGA GCAAGGAGAAACTGGGGAAACCGAAAGCGACCAAACTTGGA < 41bp 0.712513674769572 0.446960950576271 0.49001712 0.35235497 prediction 0.425027349539143 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75276335 chr8:75276336 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_87638 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:75276324-75276354
64251 chr18 54424288 54424288 1 + G A UCEC 54424285 + 54424265 54424305 41 AAGTACTGGATGAAGTTTGCCTGGATCGCCTTGGAATGCTG AAGTACTGGATGAAGTTTGCCTGAATCGCCTTGGAATGCTG < 41bp 0.712509902364403 0.479839699485318 0.1633285 0.11889896 prediction 0.425019804728805 Functional Loss - WDR7 ENSG00000091157 CDS Human protein_coding chr18:54424285 chr18:54424288 nonsynonymous SNV 0.932 1 24 hm5C_associated_SNPs_87642 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr18:54424276-54424305
64251 chr8 144461624 144461624 1 + C T SKCM 144461621 + 144461601 144461641 41 GAGGGCCTCTCACCACCTGCCTCCATGGCCCCCCAAGACTG GAGGGCCTCTCACCACCTGCCTCTATGGCCCCCCAAGACTG < 41bp 0.715079135820305 0.502569472788776 0.9762369 0.95768404 prediction 0.425019326063057 Functional Loss - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144461621 chr8:144461624 synonymous SNV . 0 24 hm5C_associated_SNPs_87643 0 0 1 GEMIN5 POSTAR2 ENCODE chr8:144461598-144461649
64251 chr17 37815749 37815749 1 + G A rs73296109 37815746 + 37815726 37815766 41 ATCCGCCAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGAT ATCCGCCAGGGGAAGGAGGCCACAGCAGTGGTGGACCAGAT < 41bp 0.777264804947556 0.564757945540872 0.73817325 0.7130172 prediction 0.425013718813369 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815746 chr17:37815749 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_87647 0 0 8 DDX24 POSTAR2 ENCODE chr17:37815713-37815800
64251 chr16 69874163 69874163 1 + G T LUSC 69874161 + 69874141 69874181 41 GCCTAATGGCAGTGCCCTGACAGATGGTGAGTGCCGCCCTG GCCTAATGGCAGTGCCCTGACATATGGTGAGTGCCGCCCTG < 41bp 0.712506802222819 0.354370702684497 0.682166 0.46724555 prediction 0.425013604445637 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69874161 chr16:69874163 nonsynonymous SNV 0.851 1 23 hm5C_associated_SNPs_87648 0 0 3 BUD13 POSTAR2 ENCODE chr16:69874118-69874165
64251 chr3 130717162 130717162 1 + C T SKCM 130717160 + 130717140 130717180 41 ACGAGACAATGTGATTACACCTCGAGACACAACAATGACCT ACGAGACAATGTGATTACACCTTGAGACACAACAATGACCT < 41bp 0.712499698797642 0.41963537022503 0.5687175 0.073531985 prediction 0.424999397595284 Functional Loss - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130717160 chr3:130717162 stopgain 1.000 1 23 hm5C_associated_SNPs_87652 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:130717140-130717164
64251 chr1 121116704 121116704 1 + G A CESC 121116701 + 121116681 121116721 41 TTTCAGCACCAAGCCAAGTACACGGAGAATAAGCTGAAGGC TTTCAGCACCAAGCCAAGTACACAGAGAATAAGCTGAAGGC < 41bp 0.761478946007386 0.548986523416332 0.41128036 0.15684426 prediction 0.424984845182107 Functional Loss - SRGAP2B;SRGAP2C ENSG00000171943 ncRNA_exonic Human protein_coding chr1:121116701 chr1:121116704 . . 0 24 hm5C_associated_SNPs_87659 0 0 1 ZNF622 POSTAR2 ENCODE chr1:121116686-121116773
64251 chr11 7586921 7586921 1 + C T BLCA 7586919 + 7586899 7586939 41 CTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCC CTTGGAGATGCTGGAGCTTCCTTAGGAGAGAGCAGCCCTCC < 41bp 0.823179786835823 0.610688014554302 0.17117047 0.29296017 prediction 0.424983544563041 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7586919 chr11:7586921 stopgain 1.000 0 23 hm5C_associated_SNPs_87660 0 0 1 GRWD1 POSTAR2 ENCODE chr11:7586880-7586930
64251 chr2 233620982 233620982 1 + G A SKCM 233620979 + 233620959 233620999 41 TGCTGCTGTCCTGCGATTGACAGGACGAGGAGGAGGAGGAA TGCTGCTGTCCTGCGATTGACAGAACGAGGAGGAGGAGGAA < 41bp 0.761005097971604 0.548515405693402 0.24931607 0.27608192 prediction 0.424979384556403 Functional Loss - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233620979 chr2:233620982 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_87662 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:233620954-233620988
64251 chr16 23695342 23695342 1 + C T SKCM 23695339 + 23695319 23695359 41 CATCACCTGCCTGACCATTCCACCAAGGTTTTCGATTGCTC CATCACCTGCCTGACCATTCCACTAAGGTTTTCGATTGCTC < 41bp 0.772691771670835 0.560203452739522 0.11300519 0.11573583 prediction 0.424976637862627 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23695339 chr16:23695342 nonsynonymous SNV 0.909 4 24 hm5C_associated_SNPs_87664 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23695271-23695363
64251 chr7 128407619 128407619 1 + G T KIRC 128407616 + 128407596 128407636 41 AACCGTGATGGGAAGATGGACAAGGAAGAGACCAAAGACTG AACCGTGATGGGAAGATGGACAATGAAGAGACCAAAGACTG < 41bp 0.712481202274993 0.338053775390685 0.24573901 0.15446487 prediction 0.424962404549986 Functional Loss - CALU ENSG00000128595 CDS Human protein_coding chr7:128407616 chr7:128407619 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_87669 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:128407527-128407653
64251 chr1 227935789 227935789 1 + C T COAD 227935787 + 227935767 227935807 41 AGACGCATCTGTCCCAAGGACCCGGGGCGAGGAGCTGACGG AGACGCATCTGTCCCAAGGACCTGGGGCGAGGAGCTGACGG < 41bp 0.71247839364363 0.453534550919274 0.17241454 0.25671092 prediction 0.424956787287261 Functional Loss - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227935787 chr1:227935789 nonsynonymous SNV 0.002 3 23 hm5C_associated_SNPs_87672 0 0 2 FMR1 POSTAR2 ENCODE chr1:227935781-227935935
64251 chr10 12131159 12131159 1 + G C LUSC 12131158 + 12131138 12131178 41 GAGGCCGTCAACCCCGTGGCCGTGGGCAAAACTCGCGGCAG GAGGCCGTCAACCCCGTGGCCCTGGGCAAAACTCGCGGCAG < 41bp 0.712477546450582 0.395843682306778 0.89195514 0.7561953 prediction 0.424955092901164 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131158 chr10:12131159 nonsynonymous SNV 0.394 1 22 hm5C_associated_SNPs_87674 0 0 1 BUD13 POSTAR2 ENCODE chr10:12131070-12131181
64251 chr13 113773044 113773044 1 + C T rs137919286 113773042 + 113773022 113773062 41 CCAGGACTGCCTGCAGCAGTCACGGAAGGTGGGAGACTCCC CCAGGACTGCCTGCAGCAGTCATGGAAGGTGGGAGACTCCC < 41bp 0.835086293864343 0.622610500184342 0.4274086 0.5849903 prediction 0.424951587360002 Functional Loss - F7 ENSG00000057593 CDS Human protein_coding chr13:113773042 chr13:113773044 nonsynonymous SNV 0.000 3 23 hm5C_associated_SNPs_87675 0 0 1 LIN28B POSTAR2 ENCODE chr13:113773039-113773099
64251 chr10 116698257 116698257 1 + C T CESC 116698254 + 116698234 116698274 41 GCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAATC GCACAAGCCCAAAGGGCCCACTTTAGCCGAGCTGCTGAATC < 41bp 0.736846949473146 0.524379718315975 0.2932251 0.028716296 prediction 0.424934462314342 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116698254 chr10:116698257 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87677 0 0 1 GRWD1 POSTAR2 ENCODE chr10:116698168-116698274
64251 chr19 49132913 49132913 1 + C T UCEC 49132911 + 49132891 49132931 41 GCCTAGAGCCGCTCACACCACGCGGCGTGCTCACAGTGGAC GCCTAGAGCCGCTCACACCACGTGGCGTGCTCACAGTGGAC < 41bp 0.771264765485185 0.558798278961282 0.33507288 0.40843067 prediction 0.424932973047807 Functional Loss - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132911 chr19:49132913 synonymous SNV . 0 23 hm5C_associated_SNPs_87679 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr19:49132900-49132920
64251 chr1 171510258 171510258 1 + G A UCEC 171510255 + 171510235 171510275 41 CAGGGGTGGTAGGGGACACACTCGAGATTATCCTCAGTATA CAGGGGTGGTAGGGGACACACTCAAGATTATCCTCAGTATA < 41bp 0.78585673804334 0.573396878191707 0.46520972 0.21089089 prediction 0.424919719703266 Functional Loss - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171510255 chr1:171510258 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_87680 0 0 27 FMR1 POSTAR2 GSE39682,GSM977616 chr1:171510200-171510260
64251 chr16 67913173 67913173 1 + C T UCEC 67913170 + 67913150 67913190 41 TGGAGCCGGTGCCATGGAGTCTGCGGCCGGTGTGCTCATCA TGGAGCCGGTGCCATGGAGTCTGTGGCCGGTGTGCTCATCA < 41bp 0.737900978495889 0.525443263835249 0.3974889 0.16186547 prediction 0.42491542932128 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913170 chr16:67913173 nonsynonymous SNV 0.719 2 24 hm5C_associated_SNPs_87682 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr16:67913166-67913184
64251 chr19 52825925 52825925 1 + G T UCEC 52825923 + 52825903 52825943 41 AGTTATCACTAACCAATCATCAGAGAATCCATACTGGAGAA AGTTATCACTAACCAATCATCATAGAATCCATACTGGAGAA < 41bp 0.712457032830543 0.374875712654587 0.8708585 0.14161256 prediction 0.424914065661086 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52825923 chr19:52825925 nonsynonymous SNV 0.082 0 23 hm5C_associated_SNPs_87683 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:52825897-52825925
64251 chr1 150444378 150444378 1 + C T STAD 150444376 + 150444356 150444396 41 CAGAACACCCTTGCCGCTCCCACGGGTCACCCACCCACGTC CAGAACACCCTTGCCGCTCCCATGGGTCACCCACCCACGTC < 41bp 0.833956353506985 0.621504750153631 0.9074128 0.86176544 prediction 0.424903206706708 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150444376 chr1:150444378 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_87685 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:150444358-150444396
64251 chr12 660177 660177 1 + C T KIRP 660174 + 660154 660194 41 TGGTGGATGGGCTTCCTCTGCAGCGCTACCAGGGACTCCGG TGGTGGATGGGCTTCCTCTGCAGTGCTACCAGGGACTCCGG < 41bp 0.717197638534529 0.50474650155885 0.7642509 0.66804695 prediction 0.424902273951358 Functional Loss - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:660174 chr12:660177 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_87686 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:660159-660179
64251 chr2 219268081 219268081 1 + C T UCEC 219268078 + 219268058 219268098 41 TGAGCCGGTTGGGTCGAGACCTGCGGCGGGTGCTCATCCTG TGAGCCGGTTGGGTCGAGACCTGTGGCGGGTGCTCATCCTG < 41bp 0.741061802203469 0.528611139914276 0.12810335 0.11294907 prediction 0.424901324578386 Functional Loss - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219268078 chr2:219268081 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_87687 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:219268045-219268089
64251 chr2 39006172 39006172 1 + G T COAD 39006169 + 39006149 39006189 41 AGAAAGGCCCCTTAGAATGGCAAGATTACATTTACAAAGAG AGAAAGGCCCCTTAGAATGGCAATATTACATTTACAAAGAG < 41bp 0.712438493014341 0.329251947126874 0.17084122 0.12688866 prediction 0.424876986028683 Functional Loss - GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39006169 chr2:39006172 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_87698 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:39006123-39006224
64251 chr5 76332466 76332466 1 + C T LAML 76332463 + 76332443 76332483 41 TTTGAGAGCTGCAGCAGAAGCGGCTGTATCACAGACTGGAT TTTGAGAGCTGCAGCAGAAGCGGTTGTATCACAGACTGGAT < 41bp 0.7271201681585 0.514681721909607 0.6528312 0.7265054 prediction 0.424876892497786 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332463 chr5:76332466 nonsynonymous SNV 0.974 5 24 hm5C_associated_SNPs_87699 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:76332462-76332495
64251 chr9 101589095 101589095 1 + C T BRCA 101589092 + 101589072 101589112 41 CTGCCCAAGGTGCGCCTGATCCGCGCCAACAAGAGAGAGGG CTGCCCAAGGTGCGCCTGATCCGTGCCAACAAGAGAGAGGG < 41bp 0.727183233452686 0.514746976667609 0.77846336 0.15884948 prediction 0.424872513570155 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101589092 chr9:101589095 synonymous SNV . 0 24 hm5C_associated_SNPs_87700 0 0 1 DDX24 POSTAR2 ENCODE chr9:101589031-101589106
64251 chr16 29853109 29853109 1 + G A UCEC 29853106 + 29853086 29853126 41 AGACCCGTGTGGTCAGCTACCGCGTGCCCCACAACGCTGCG AGACCCGTGTGGTCAGCTACCGCATGCCCCACAACGCTGCG < 41bp 0.806384146050906 0.593955019648662 0.73811364 0.64819384 prediction 0.424858252804488 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29853106 chr16:29853109 nonsynonymous SNV 0.529 4 24 hm5C_associated_SNPs_87707 0 0 1 SUPV3L1 POSTAR2 ENCODE chr16:29853067-29853122
64251 chr1 235505557 235505557 1 + G A HNSC 235505554 + 235505534 235505574 41 GCCAGCTTTTGGAACTCCATCAGGGACAAGGCCTAGATATT GCCAGCTTTTGGAACTCCATCAGAGACAAGGCCTAGATATT < 41bp 0.712426446056378 0.47862055525197 0.9493999 0.9323927 prediction 0.424852892112756 Functional Loss - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505554 chr1:235505557 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87709 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:235505528-235505567
64251 chr7 100780385 100780385 1 + C T rs6089 100780383 + 100780363 100780403 41 CAGGTGAGCCTGGAACCCATCACGTTCCACATCCTCCCACC CAGGTGAGCCTGGAACCCATCATGTTCCACATCCTCCCACC < 41bp 0.712421823908686 0.494758076242878 0.29052848 0.24609727 prediction 0.424843647817373 Functional Loss - SERPINE1 ENSG00000106366 intronic Human protein_coding chr7:100780383 chr7:100780385 . . 0 23 hm5C_associated_SNPs_87714 0 0 1 SUPV3L1 POSTAR2 ENCODE chr7:100780369-100780386
64251 chr6 160176217 160176217 1 + A T LUSC 160176213 + 160176193 160176233 41 TGCCCCAAGTACCAGCAGGACTACAGCTTCTGAACCTGTAG TGCCCCAAGTACCAGCAGGACTACTGCTTCTGAACCTGTAG < 41bp 0.71241867307884 0.376639170143012 0.34547037 0.32102266 prediction 0.42483734615768 Functional Loss - WTAP ENSG00000146457 CDS Human protein_coding chr6:160176213 chr6:160176217 synonymous SNV . 0 25 hm5C_associated_SNPs_87715 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:160176170-160176242
64251 chr1 165865569 165865569 1 + G T UCEC 165865565 + 165865545 165865585 41 GCGGACACCCGGCTCTCACGCAGAGGTGCGTTCTAAAAGCC GCGGACACCCGGCTCTCACGCAGATGTGCGTTCTAAAAGCC < 41bp 0.714273983487086 0.501857909437447 0.91210103 0.8683579 prediction 0.424832148099279 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165865565 chr1:165865569 nonsynonymous SNV 0.938 2 25 hm5C_associated_SNPs_87717 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:165865504-165865576
64251 chr17 6024188 6024188 1 + C T rs8066825 6024186 + 6024166 6024206 41 AATGGACACACATACCTGGCCACGAACCCACACCTCCTCAG AATGGACACACATACCTGGCCATGAACCCACACCTCCTCAG < 41bp 0.712409465220092 0.463377201925506 0.20181498 0.18985656 prediction 0.424818930440183 Functional Loss - WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6024186 chr17:6024188 . . 0 23 hm5C_associated_SNPs_87719 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:6024111-6024213
64251 chr17 6024189 6024189 1 + G A rs143409660 6024186 + 6024166 6024206 41 AATGGACACACATACCTGGCCACGAACCCACACCTCCTCAG AATGGACACACATACCTGGCCACAAACCCACACCTCCTCAG < 41bp 0.712409465220092 0.479177278802882 0.20181498 0.25408182 prediction 0.424818930440183 Functional Loss - WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6024186 chr17:6024189 . . 0 24 hm5C_associated_SNPs_87720 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:6024111-6024213
64251 chr19 58102049 58102049 1 + C T CESC 58102046 + 58102026 58102066 41 AATGATCATCGGAGAATCCACACCGGAGAAAGGCCTTATGA AATGATCATCGGAGAATCCACACTGGAGAAAGGCCTTATGA < 41bp 0.749038782668934 0.536633488271606 0.30998132 0.23888105 prediction 0.424810588794656 Functional Loss - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58102046 chr19:58102049 synonymous SNV . 0 24 hm5C_associated_SNPs_87721 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58102029-58102060
64251 chr10 98741971 98741971 1 + G A COAD 98741968 + 98741948 98741988 41 AGGAGGTGGAGACGTTTCACCTCGAAAAGAACCTCAAGAGC AGGAGGTGGAGACGTTTCACCTCAAAAAGAACCTCAAGAGC < 41bp 0.80367124241909 0.591272257985613 0.9035203 0.14893413 prediction 0.424797968866954 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98741968 chr10:98741971 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_87727 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:98741958-98741985
64251 chr11 59831748 59831748 1 + G A LGG 59831745 + 59831725 59831765 41 TTTCAAACAGTTCTGTAGTTCAGGAACCTTGTCTGTTGTAG TTTCAAACAGTTCTGTAGTTCAGAAACCTTGTCTGTTGTAG < 41bp 0.75916089955392 0.546766923308699 0.8617717 0.43296438 prediction 0.424787952490442 Functional Loss - MS4A3 ENSG00000149516 CDS Human protein_coding chr11:59831745 chr11:59831748 nonsynonymous SNV 0.322 2 24 hm5C_associated_SNPs_87728 0 0 5 BUD13 POSTAR2 ENCODE chr11:59831709-59831748
64251 chr1 119683254 119683254 1 - G A CESC 119683256 - 119683236 119683276 41 CTTCTCAAGATGGCGCTGCACTCAATGCGGAAAGCGCGTGA CTTCTCAAGATGGCGCTGCACTTAATGCGGAAAGCGCGTGA < 41bp 0.848803422346921 0.636410709061979 0.07360262 0.09022656 prediction 0.424785426569884 Functional Loss - WARS2 ENSG00000116874 CDS Human protein_coding chr1:119683256 chr1:119683254 nonsynonymous SNV 0.372 0 23 hm5C_associated_SNPs_87730 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:119683253-119683254
64251 chr14 70478250 70478250 1 + G T HNSC 70478246 + 70478226 70478266 41 CGACGCCAGGGCCAAGACTACAGAGGCGGATGACCCCTTCA CGACGCCAGGGCCAAGACTACAGATGCGGATGACCCCTTCA < 41bp 0.728174124192721 0.515781451933256 0.5654224 0.2307753 prediction 0.42478534451893 Functional Loss - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70478246 chr14:70478250 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_87731 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr14:70478240-70478260
64251 chr1 110999334 110999334 1 + G A rs116271905 110999331 + 110999311 110999351 41 CCCTCTCCCCACATGTATCCCTCGGTCTGAATTAGACATTC CCCTCTCCCCACATGTATCCCTCAGTCTGAATTAGACATTC < 41bp 0.760234183565448 0.547845798067446 0.11651662 0.13886437 prediction 0.424776770996003 Functional Loss - PROK1 ENSG00000270380 ncRNA_intronic Human antisense chr1:110999331 chr1:110999334 . . 0 24 hm5C_associated_SNPs_87733 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:110999282-110999339
64251 chr22 20040099 20040099 1 + G A CESC 20040096 + 20040076 20040116 41 GCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGTAAGGCGA GCCGCAGCTGGACTGGCAGGCCCAAGGGCGAGGTAAGGCGA < 41bp 0.769523906594913 0.557141932619476 0.39584225 0.42767006 prediction 0.424763947950874 Functional Loss - TANGO2 ENSG00000183597 CDS Human protein_coding chr22:20040096 chr22:20040099 nonsynonymous SNV 0.024 0 24 hm5C_associated_SNPs_87740 0 0 1 DDX24 POSTAR2 ENCODE chr22:20040041-20040109
64251 chr5 138266583 138266583 1 + G T COAD 138266581 + 138266561 138266601 41 TGCCAAGAAAATTGCTGAGGCAGGATCCAGGATGGACAAGC TGCCAAGAAAATTGCTGAGGCATGATCCAGGATGGACAAGC < 41bp 0.712381729618349 0.370159130757665 0.8016429 0.20409325 prediction 0.424763459236697 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266581 chr5:138266583 stopgain 0.996 1 23 hm5C_associated_SNPs_87741 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:138266569-138266598
64251 chr4 158057786 158057786 1 + G A SKCM 158057783 + 158057763 158057803 41 ATGAAAAAAGTGCCAATTTTCATGATGTGACCCAGGAAAAC ATGAAAAAAGTGCCAATTTTCATAATGTGACCCAGGAAAAC < 41bp 0.712381611239465 0.491090088799903 0.22826982 0.1369665 prediction 0.424763222478929 Functional Loss - GLRB ENSG00000109738 CDS Human protein_coding chr4:158057783 chr4:158057786 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_87742 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:158057780-158057800
64251 chr2 238990409 238990409 1 + G A UCEC 238990406 + 238990386 238990426 41 AGGCAGAGGTGGACGACATCCTCGCGGCAGTCCGCCCGACC AGGCAGAGGTGGACGACATCCTCACGGCAGTCCGCCCGACC < 41bp 0.815662119014688 0.603280973465307 0.105163366 0.047817975 prediction 0.424762291098763 Functional Loss - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990406 chr2:238990409 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_87743 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:238990408-238990409
64251 chr9 115634598 115634598 1 + C T rs139348708 115634596 + 115634576 115634616 41 GTGGAATTTTGGGATGGCAGCCCGAGGAACATCCAGAGTTA GTGGAATTTTGGGATGGCAGCCTGAGGAACATCCAGAGTTA < 41bp 0.766082606793794 0.553703749302189 0.6763775 0.6477619 prediction 0.42475771498321 Functional Loss - SNX30 ENSG00000148158 UTR3 Human protein_coding chr9:115634596 chr9:115634598 . . 0 23 hm5C_associated_SNPs_87746 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:115634554-115634602
64251 chr5 150647935 150647935 1 + C T rs534926050 150647933 + 150647913 150647953 41 ACCATGTTGGCCAGGATGGTCTCGATCTCTTGACCTCGTGA ACCATGTTGGCCAGGATGGTCTTGATCTCTTGACCTCGTGA < 41bp 0.819930733317953 0.60755367203338 0.67777425 0.29101056 prediction 0.424754122569145 Functional Loss - GM2A ENSG00000196743 UTR3 Human protein_coding chr5:150647933 chr5:150647935 . . 0 23 hm5C_associated_SNPs_87749 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704219 chr5:150647931-150647952
64251 chr15 57524985 57524985 1 + A C UCEC 57524981 + 57524961 57525001 41 CCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCACC CCAATGTCCAGCTTTCATCGCGGCCGTACCAGCAGTTCACC < 41bp 0.712372448290802 0.322165225698155 0.6703904 0.80608636 prediction 0.424744896581603 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57524981 chr15:57524985 nonsynonymous SNV 0.916 2 25 hm5C_associated_SNPs_87751 0 0 6 IGF2BP1 POSTAR2 ENCODE chr15:57524964-57525006
64251 chr19 32971376 32971376 1 + C T UCEC 32971373 + 32971353 32971393 41 CTAAGGTCCTTCGGCACTGACTACGTAATCCTGGAAGACAG CTAAGGTCCTTCGGCACTGACTATGTAATCCTGGAAGACAG < 41bp 0.712368464274991 0.488399871713611 0.081943125 0.077165574 prediction 0.424736928549982 Functional Loss - DPY19L3 ENSG00000178904 CDS Human protein_coding chr19:32971373 chr19:32971376 synonymous SNV . 0 24 hm5C_associated_SNPs_87754 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr19:32971354-32971378
64251 chr13 28830518 28830518 1 + C T SKCM 28830516 + 28830496 28830536 41 TCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACA TCCCAGAAGAAGAAGTCACACTTCAAATCCAGCAAGTTACA < 41bp 0.712366245033743 0.395859832590392 0.9500809 0.057167143 prediction 0.424732490067487 Functional Loss - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28830516 chr13:28830518 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_87757 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:28830515-28830543
64251 chr13 28830519 28830519 1 + C T SKCM 28830516 + 28830496 28830536 41 TCCCAGAAGAAGAAGTCACACTCCAAATCCAGCAAGTTACA TCCCAGAAGAAGAAGTCACACTCTAAATCCAGCAAGTTACA < 41bp 0.712366245033743 0.477188787616796 0.9500809 0.36360434 prediction 0.424732490067487 Functional Loss - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28830516 chr13:28830519 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_87758 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:28830515-28830543
64251 chr16 2136285 2136285 1 + A T SARC 2136281 + 2136261 2136301 41 GCCTGGGCCGGCTCATCGAGCTGAAGGACTGCCAGCCGGAC GCCTGGGCCGGCTCATCGAGCTGATGGACTGCCAGCCGGAC < 41bp 0.712364749264148 0.387562614484183 0.2586078 0.32835993 prediction 0.424729498528295 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2136281 chr16:2136285 nonsynonymous SNV 0.983 5 25 hm5C_associated_SNPs_87759 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2136283-2136323
64251 chr1 90475835 90475835 1 + C T MESO 90475832 + 90475812 90475852 41 CCTATGGAGAAGATAAGCCTCAGCAAATCACCCAGTAAGTA CCTATGGAGAAGATAAGCCTCAGTAAATCACCCAGTAAGTA < 41bp 0.720401498677625 0.508043192091233 0.17616633 0.22888324 prediction 0.424716613172783 Functional Loss - ZNF326 ENSG00000162664 CDS Human protein_coding chr1:90475832 chr1:90475835 synonymous SNV . 0 24 hm5C_associated_SNPs_87764 0 0 4 GRWD1 POSTAR2 ENCODE chr1:90475763-90475847
64251 chr14 65008142 65008142 1 + C T UCEC 65008140 + 65008120 65008160 41 GGCCTGGACAAGAAGGGCTGCGCGGGCGGCGAGAAGAACGT GGCCTGGACAAGAAGGGCTGCGTGGGCGGCGAGAAGAACGT < 41bp 0.820991325864667 0.608639441635437 0.7484996 0.7838392 prediction 0.424703768458459 Functional Loss - HSPA2 ENSG00000126803 CDS Human protein_coding chr14:65008140 chr14:65008142 nonsynonymous SNV 0.775 0 23 hm5C_associated_SNPs_87771 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:65008129-65008167
64251 chr8 121381683 121381683 1 + G A SKCM 121381680 + 121381660 121381700 41 CCAAGGTCCTTCTGGCCAGCCTGGATATTGTGACCCCTCAT CCAAGGTCCTTCTGGCCAGCCTGAATATTGTGACCCCTCAT < 41bp 0.786428246594536 0.574079678060268 0.14163923 0.06601882 prediction 0.424697137068536 Functional Loss - COL14A1 ENSG00000187955 CDS Human protein_coding chr8:121381680 chr8:121381683 nonsynonymous SNV 0.347 3 24 hm5C_associated_SNPs_87776 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:121381669-121381698
64251 chrX 30265555 30265555 1 + G C rs2074794 30265554 + 30265534 30265574 41 GGGGTGCAGCGTCTGGTCAGCGGAGGGTGAATTCTCAGGAC GGGGTGCAGCGTCTGGTCAGCCGAGGGTGAATTCTCAGGAC < 41bp 0.833759072971845 0.621413704997488 0.92337406 0.9124414 prediction 0.424690735948713 Functional Loss - MAGEB1 ENSG00000214107 UTR5 Human protein_coding chrX:30265554 chrX:30265555 . . 0 22 hm5C_associated_SNPs_87778 0 0 1 DDX3X POSTAR2 ENCODE chrX:30265543-30265584
64251 chr12 102542068 102542068 1 + C T HNSC 102542065 + 102542045 102542085 41 TATTGACATGGAAATACTTGCTCCATGAGAAATTGAACTTA TATTGACATGGAAATACTTGCTCTATGAGAAATTGAACTTA < 41bp 0.762402235280123 0.550057786879193 0.9284493 0.9213666 prediction 0.42468889680186 Functional Loss - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102542065 chr12:102542068 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_87779 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:102542033-102542077
64251 chr12 6946159 6946159 1 + G A COAD 6946156 + 6946136 6946176 41 CCTTCCTATTTAGGATGCAGCTGGGGCTGGAGCCAGGTCTG CCTTCCTATTTAGGATGCAGCTGAGGCTGGAGCCAGGTCTG < 41bp 0.821660578952801 0.609317738099532 0.4823187 0.33953816 prediction 0.424685681706537 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6946156 chr12:6946159 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_87780 0 0 2 BUD13 POSTAR2 ENCODE chr12:6946146-6946184
64251 chr11 65046257 65046257 1 + C T SKCM 65046255 + 65046235 65046275 41 AACCGAGGAGAAGTGGTTACCTCCTTCGGCTTAGCACAGGG AACCGAGGAGAAGTGGTTACCTTCTTCGGCTTAGCACAGGG < 41bp 0.712338032691604 0.413155412486592 0.15106043 0.023979902 prediction 0.424676065383208 Functional Loss - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65046255 chr11:65046257 nonsynonymous SNV 0.968 1 23 hm5C_associated_SNPs_87784 0 0 1 U2AF2 POSTAR2 ENCODE chr11:65046181-65046299
64251 chr16 72094654 72094654 1 + C T rs5477 72094652 + 72094632 72094672 41 CGGGCAGTGCCTTTGCCGTTCACGACCTGGAGGAGGACACC CGGGCAGTGCCTTTGCCGTTCATGACCTGGAGGAGGACACC < 41bp 0.84378353259109 0.631446001404662 0.26245824 0.3630935 prediction 0.424675062372856 Functional Loss - HP ENSG00000257017 CDS Human protein_coding chr16:72094652 chr16:72094654 synonymous SNV . 0 23 hm5C_associated_SNPs_87786 0 0 5 LARP4 POSTAR2 ENCODE chr16:72094623-72094689
64251 chr3 50155853 50155853 1 + G A SKCM 50155850 + 50155830 50155870 41 GATTCCTACAAAGATGCTGTCCGGAAAGCCATGTTTGCCCG GATTCCTACAAAGATGCTGTCCGAAAAGCCATGTTTGCCCG < 41bp 0.766770814048023 0.554436324406458 0.23194379 0.0507136 prediction 0.424668979283131 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50155850 chr3:50155853 synonymous SNV . 0 24 hm5C_associated_SNPs_87787 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:50155766-50155858
64251 chr5 170883681 170883681 1 + C T LUSC 170883679 + 170883659 170883699 41 GCCGCGGAAGGGCCCCAAGACCCGGGAGAACCAGCAGGACG GCCGCGGAAGGGCCCCAAGACCTGGGAGAACCAGCAGGACG < 41bp 0.806010438299412 0.593675997536068 0.11890313 0.2519402 prediction 0.424668881526687 Functional Loss - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170883679 chr5:170883681 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_87788 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:170883675-170883707
64251 chr1 897741 897741 1 + G A UCEC 897738 + 897718 897758 41 AGGACCCCCACTCCCAGGTTCTGGAACTGGTCTCTAGCGAC AGGACCCCCACTCCCAGGTTCTGAAACTGGTCTCTAGCGAC < 41bp 0.712331925333972 0.463078052327776 0.6250156 0.3323416 prediction 0.424663850667945 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897738 chr1:897741 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87791 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:897720-897770
64251 chr17 2278990 2278990 1 + G A BLCA 2278987 + 2278967 2279007 41 CCTCGGGCATCCAGTCAAGCCTAGATGAGGGGCAGAGCGTG CCTCGGGCATCCAGTCAAGCCTAAATGAGGGGCAGAGCGTG < 41bp 0.809891894765133 0.597560833795334 0.14852849 0.10194731 prediction 0.424662121939598 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278987 chr17:2278990 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_87792 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:2278989-2278990
64251 chr19 17845184 17845184 1 + A C UCEC 17845183 + 17845163 17845203 41 ATCACGGTGTTGGGCAGCAACAGCATGGTGTCCATGCAGGA ATCACGGTGTTGGGCAGCAACCGCATGGTGTCCATGCAGGA < 41bp 0.806061583802166 0.593730859498958 0.20015973 0.08370829 prediction 0.424661448606416 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17845183 chr19:17845184 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_87793 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17845165-17845202
64251 chr1 186390022 186390022 1 + G T rs145401556 186390020 + 186390000 186390040 41 AAAACATGAATTCATAAATTCAGGAAGCACAATATATACCA AAAACATGAATTCATAAATTCATGAAGCACAATATATACCA < 41bp 0.712769316391147 0.500439045165462 0.23798564 0.051552385 prediction 0.424660542451369 Functional Loss - C1orf27 ENSG00000157181 UTR3 Human protein_coding chr1:186390020 chr1:186390022 . . 0 23 hm5C_associated_SNPs_87794 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:186389998-186390023
64251 chr13 20235920 20235920 1 + C T UCEC 20235918 + 20235898 20235938 41 CGACTCCTCATCACAAAAGGCGCGAAAGTGAACGGTCGGCA CGACTCCTCATCACAAAAGGCGTGAAAGTGAACGGTCGGCA < 41bp 0.866192488738491 0.65386360462394 0.24882683 0.20002139 prediction 0.424657768229103 Functional Loss - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20235918 chr13:20235920 nonsynonymous SNV 0.649 2 23 hm5C_associated_SNPs_87795 0 0 1 BUD13 POSTAR2 ENCODE chr13:20235789-20235942
64251 chr17 34893747 34893747 1 + T C LIHC 34893746 + 34893726 34893766 41 ATAAGTCCTGGATTATTGCCCTCGGCATTACTGTATTATAC ATAAGTCCTGGATTATTGCCCCCGGCATTACTGTATTATAC < 41bp 0.712322005714802 0.469080429143972 0.082803935 0.06531894 prediction 0.424644011429604 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893746 chr17:34893747 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_87800 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr17:34893709-34893755
64251 chr17 48745156 48745156 1 + G T CESC 48745152 + 48745132 48745172 41 CAGGGCTGGGTCCCTGCCTCCAGGGCTCTGGGTGCCCAGGC CAGGGCTGGGTCCCTGCCTCCAGGTCTCTGGGTGCCCAGGC < 41bp 0.712317890765082 0.494651431890585 0.9283156 0.92161787 prediction 0.424635781530163 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745152 chr17:48745156 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_87803 0 0 1 PRPF8 POSTAR2 ENCODE chr17:48745092-48745159
64251 chr18 12329585 12329585 1 - C T UCEC 12329588 - 12329568 12329608 41 GAAAAGGAGAAAGAGGAGCCCCCGGGTGAGAAAGTTGCCAA GAAAAGGAGAAAGAGGAGCCCCCAGGTGAGAAAGTTGCCAA < 41bp 0.712315811397965 0.482283022677428 0.6861935 0.6466384 prediction 0.424631622795929 Functional Loss - AFG3L2 ENSG00000141385 CDS Human protein_coding chr18:12329588 chr18:12329585 synonymous SNV . 0 24 hm5C_associated_SNPs_87805 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr18:12329580-12329600
64251 chr6 37427414 37427414 1 + T C UCEC 37427413 + 37427393 37427433 41 CTGCTTTTCGGAATTTTGTCCTGGATAACACAGATCGCAAG CTGCTTTTCGGAATTTTGTCCCGGATAACACAGATCGCAAG < 41bp 0.712309981070577 0.446551006994353 0.41046804 0.51889306 prediction 0.424619962141153 Functional Loss - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37427413 chr6:37427414 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_87809 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:37427397-37427437
64251 chr10 5945116 5945116 1 + G C LIHC 5945115 + 5945095 5945135 41 CCATGGTCTCTATCCTAAACCGAGAACAAAAAGAGGGAGTA CCATGGTCTCTATCCTAAACCCAGAACAAAAAGAGGGAGTA < 41bp 0.712309749836891 0.415311909515721 0.3077736 0.31638223 prediction 0.424619499673782 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5945115 chr10:5945116 synonymous SNV . 0 22 hm5C_associated_SNPs_87810 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:5945069-5945119
64251 chr16 25180478 25180478 1 + C T BLCA 25180475 + 25180455 25180495 41 GGCAGATCATGATTGAAAACCTGCGGAGACGCCAGTGTGAC GGCAGATCATGATTGAAAACCTGTGGAGACGCCAGTGTGAC < 41bp 0.763397876264208 0.551089199272897 0.28713715 0.33585167 prediction 0.424617353982622 Functional Loss - LCMT1 ENSG00000205629 CDS Human protein_coding chr16:25180475 chr16:25180478 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_87812 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:25180456-25180482
64251 chr2 97007492 97007492 1 + C T BLCA 97007490 + 97007470 97007510 41 CCCTGCCCAGGAAGGCGCCTCTCAATATTCCTGGCACCCCA CCCTGCCCAGGAAGGCGCCTCTTAATATTCCTGGCACCCCA < 41bp 0.712304443293647 0.421003857108454 0.90737283 0.18433711 prediction 0.424608886587295 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97007490 chr2:97007492 synonymous SNV . 0 23 hm5C_associated_SNPs_87814 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:97007483-97007520
64251 chr19 44103164 44103164 1 + C T rs11542670 44103162 + 44103142 44103182 41 CCTCCAAAGCCCTAATCACCCACCAGCGCAGCCACGGTCCA CCTCCAAAGCCCTAATCACCCATCAGCGCAGCCACGGTCCA < 41bp 0.8325384624965 0.620237960745882 0.106309 0.10951471 prediction 0.424601003501236 Functional Loss - ZNF576 ENSG00000124444 CDS Human protein_coding chr19:44103162 chr19:44103164 synonymous SNV . 0 23 hm5C_associated_SNPs_87816 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:44103163-44103164
64251 chr22 50636350 50636350 1 + C T rs527937578 50636348 + 50636328 50636368 41 GACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCT GACCTGCACCGCACCATCGTCTTGGAGCGCGACGTCTACCT < 41bp 0.712299488254999 0.426970095434986 0.68144774 0.17186162 prediction 0.424598976509998 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636348 chr22:50636350 nonsynonymous SNV 0.673 1 23 hm5C_associated_SNPs_87817 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221663 chr22:50636340-50636360
64251 chr5 162945257 162945257 1 + C T SKCM 162945255 + 162945235 162945275 41 AGAAATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGGG AGAAATGCTCAGCTTGACTGCTTCAAATTGGAGACCTTGGG < 41bp 0.837987231385569 0.625693401060187 0.35751325 0.062476426 prediction 0.424587660650765 Functional Loss - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945255 chr5:162945257 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_87821 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:162945201-162945298
64251 chr1 44447534 44447534 1 + C T SKCM 44447531 + 44447511 44447551 41 AACACCACCTGCGCTACTGGCTCCACTATCTACACCCCATC AACACCACCTGCGCTACTGGCTCTACTATCTACACCCCATC < 41bp 0.736056337216022 0.52376385996085 0.56020504 0.4170991 prediction 0.424584954510344 Functional Loss - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44447531 chr1:44447534 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87822 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:44447500-44447536
64251 chr6 76369015 76369015 1 + A T KIRC 76369011 + 76368991 76369031 41 GAAAACAGAAGAGTCCGAATCACAAGTGGAGCCTGAAATTA GAAAACAGAAGAGTCCGAATCACATGTGGAGCCTGAAATTA < 41bp 0.712286498545732 0.36969167486909 0.030726403 0.057765633 prediction 0.424572997091464 Functional Loss - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76369011 chr6:76369015 nonsynonymous SNV 0.016 0 25 hm5C_associated_SNPs_87825 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:76368979-76369041
64251 chr21 33296950 33296950 1 + T C SKCM 33296949 + 33296929 33296969 41 CCTGGTCATGGAGCTGTGCCCTGGGGGCAACCTGATGCACA CCTGGTCATGGAGCTGTGCCCCGGGGGCAACCTGATGCACA < 41bp 0.808333052085878 0.596051038580245 0.51724464 0.8878901 prediction 0.424564027011267 Functional Loss - HUNK ENSG00000142149 CDS Human protein_coding chr21:33296949 chr21:33296950 synonymous SNV . 0 22 hm5C_associated_SNPs_87828 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:33296942-33296972
64251 chr11 376571 376571 1 + G A rs558666429 376568 + 376548 376588 41 CCCGCCGACCCCTCCCCGCCCCCGGGACGGGGGGACCCCCA CCCGCCGACCCCTCCCCGCCCCCAGGACGGGGGGACCCCCA < 41bp 0.712279810619647 0.467942425981681 0.41347623 0.11840883 prediction 0.424559621239294 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:376568 chr11:376571 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_87836 0 0 3 DDX59 POSTAR2 ENCODE chr11:376553-376618
64251 chr22 20044041 20044041 1 + G A rs75011475 20044038 + 20044018 20044058 41 CTCTGCGCCAGGTCACACTCCACGGCTGGGCCCTTCCTGCC CTCTGCGCCAGGTCACACTCCACAGCTGGGCCCTTCCTGCC < 41bp 0.759085192619639 0.546813617327865 0.7143586 0.16878253 prediction 0.424543150583547 Functional Loss - TANGO2 ENSG00000183597 intronic Human protein_coding chr22:20044038 chr22:20044041 . . 0 24 hm5C_associated_SNPs_87842 0 0 3 DGCR8 POSTAR2 ENCODE chr22:20044018-20044067
64251 chr22 29139951 29139951 1 + C T SKCM 29139948 + 29139928 29139968 41 CGTCTTGTCCACCCAGATTTCTTCAGCCAGAGGTCTCAGGT CGTCTTGTCCACCCAGATTTCTTTAGCCAGAGGTCTCAGGT < 41bp 0.743714829164007 0.531445147782571 0.15204749 0.089488685 prediction 0.424539362762872 Functional Loss - HSCB ENSG00000100209 CDS Human protein_coding chr22:29139948 chr22:29139951 synonymous SNV . 0 24 hm5C_associated_SNPs_87844 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr22:29139940-29139960
64251 chr2 97217112 97217112 1 + G A SKCM 97217109 + 97217089 97217129 41 GCCAGGAGGAGGGCTGCCGCCATGGGGCAGAGCCCCAGGCG GCCAGGAGGAGGGCTGCCGCCATAGGGCAGAGCCCCAGGCG < 41bp 0.816217296713695 0.603947862701619 0.890846 0.89549077 prediction 0.424538868024151 Functional Loss - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217109 chr2:97217112 nonsynonymous SNV 0.545 1 24 hm5C_associated_SNPs_87845 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:97217077-97217127
64251 chr12 119594419 119594419 1 + G A COAD 119594416 + 119594396 119594436 41 CTCGGCCAGCCGCAGCTACTCCCGGAGCCGGAGTCGGAGCC CTCGGCCAGCCGCAGCTACTCCCAGAGCCGGAGTCGGAGCC < 41bp 0.712267182674306 0.468525748156516 0.867027 0.37631923 prediction 0.424534365348611 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119594416 chr12:119594419 nonsynonymous SNV 0.561 3 24 hm5C_associated_SNPs_87846 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119594400-119594420
64251 chr12 119594418 119594418 1 + C T UCEC 119594416 + 119594396 119594436 41 CTCGGCCAGCCGCAGCTACTCCCGGAGCCGGAGTCGGAGCC CTCGGCCAGCCGCAGCTACTCCTGGAGCCGGAGTCGGAGCC < 41bp 0.712267182674306 0.455207702645647 0.867027 0.8100524 prediction 0.424534365348611 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119594416 chr12:119594418 nonsynonymous SNV 0.559 3 23 hm5C_associated_SNPs_87847 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119594400-119594420
64251 chr7 6769646 6769646 1 + G A rs369547373 6769643 + 6769623 6769663 41 GGCCCTGCGGCCAGGGGAACCGGGCGGGAGGTGGCGAAGGT GGCCCTGCGGCCAGGGGAACCGGACGGGAGGTGGCGAAGGT < 41bp 0.742167548254407 0.529901375339283 0.87126577 0.84139025 prediction 0.424532345830248 Functional Loss - ZNF12;PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6769643 chr7:6769646 . . 0 24 hm5C_associated_SNPs_87849 0 0 3 GTF2F1 POSTAR2 ENCODE chr7:6769577-6769722
64251 chr22 50320925 50320925 1 + G A LGG 50320922 + 50320902 50320942 41 GAAGCCACAGAAGGAGAAAGCCCGACACAGCTGCCCTCCCG GAAGCCACAGAAGGAGAAAGCCCAACACAGCTGCCCTCCCG < 41bp 0.795282206239958 0.583028252253456 0.22854954 0.12817779 prediction 0.424507907973003 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50320922 chr22:50320925 synonymous SNV . 0 24 hm5C_associated_SNPs_87856 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr22:50320915-50320944
64251 chr3 9775965 9775965 1 + C T rs146653692 9775963 + 9775943 9775983 41 ACCACCTGTACCACTATGACCACGACAACCCACCACCCCCA ACCACCTGTACCACTATGACCATGACAACCCACCACCCCCA < 41bp 0.712249466635982 0.427989900171043 0.06717333 0.08468366 prediction 0.424498933271964 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775963 chr3:9775965 synonymous SNV . 0 23 hm5C_associated_SNPs_87859 0 0 1 RBPMS POSTAR2 SRX484628 chr3:9775960-9775980
64251 chr3 9775966 9775966 1 + G A LGG 9775963 + 9775943 9775983 41 ACCACCTGTACCACTATGACCACGACAACCCACCACCCCCA ACCACCTGTACCACTATGACCACAACAACCCACCACCCCCA < 41bp 0.712249466635982 0.464767602624184 0.06717333 0.027305156 prediction 0.424498933271964 Functional Loss - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9775963 chr3:9775966 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87860 0 0 4 RBPMS POSTAR2 SRX484628 chr3:9775960-9775980
64251 chr1 248059253 248059253 1 + G T LUAD 248059251 + 248059231 248059271 41 CTGGCTGTCATGGCCTATGACCGGTGTGTGGCTATCTGCAA CTGGCTGTCATGGCCTATGACCTGTGTGTGGCTATCTGCAA < 41bp 0.712249432463159 0.348914460465043 0.3705023 0.091086775 prediction 0.424498864926318 Functional Loss - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059251 chr1:248059253 nonsynonymous SNV 0.215 3 23 hm5C_associated_SNPs_87861 0 0 1 NONO POSTAR2 ENCODE chr1:248059214-248059271
64251 chrX 140995410 140995410 1 + C T LUAD 140995408 + 140995388 140995428 41 GGGAGGACTTCCAGTCTTCTCTCCAGAGTCCTGTGAGTATC GGGAGGACTTCCAGTCTTCTCTTCAGAGTCCTGTGAGTATC < 41bp 0.853532166601331 0.641287520770158 0.96033096 0.193158 prediction 0.424489291662347 Functional Loss - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995408 chrX:140995410 synonymous SNV . 0 23 hm5C_associated_SNPs_87865 0 0 2 PTBP1 POSTAR2 ENCODE chrX:140995299-140995416
64251 chr9 6413373 6413373 1 + G C rs564871012 6413372 + 6413352 6413392 41 TCCGGTCGGTCCGGTGGGCGCGCTCGCCCGCCTGCCGCTGA TCCGGTCGGTCCGGTGGGCGCCCTCGCCCGCCTGCCGCTGA < 41bp 0.712242007231542 0.424327139808619 0.2010333 0.16248006 prediction 0.424484014463085 Functional Loss - UHRF2 ENSG00000147854 UTR5 Human protein_coding chr9:6413372 chr9:6413373 . . 0 22 hm5C_associated_SNPs_87868 0 0 6 DDX3X POSTAR2 ENCODE chr9:6413371-6413466
64251 chr15 89195437 89195437 1 + G C OV 89195436 + 89195416 89195456 41 ATGAGCGGCTACACAATCTACGACACGTCCACTGACAGGCT ATGAGCGGCTACACAATCTACCACACGTCCACTGACAGGCT < 41bp 0.712240026179726 0.400554296981533 0.009140998 0.02621463 prediction 0.424480052359451 Functional Loss - ISG20 ENSG00000172183 CDS Human protein_coding chr15:89195436 chr15:89195437 nonsynonymous SNV 0.951 4 22 hm5C_associated_SNPs_87871 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:89195414-89195442
64251 chr11 605150 605150 1 + G A UCEC 605147 + 605127 605167 41 CACCACTCGCTCTCGAATCGCGCGGACGCTGGGCCTGCGCA CACCACTCGCTCTCGAATCGCGCAGACGCTGGGCCTGCGCA < 41bp 0.71223656941122 0.458925242284258 0.91092813 0.89652896 prediction 0.424473138822441 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605147 chr11:605150 nonsynonymous SNV 0.012 4 24 hm5C_associated_SNPs_87874 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:605141-605152
64251 chr14 103800804 103800804 1 + C T rs12896 103800802 + 103800782 103800822 41 TCCCCGCTGCTCGGCGGCGGCACCTGGCCCGGCCGCTCCTC TCCCCGCTGCTCGGCGGCGGCATCTGGCCCGGCCGCTCCTC < 41bp 0.734939926193438 0.522707091680969 0.5070325 0.65245867 prediction 0.424465669024939 Functional Loss - EIF5 ENSG00000100664 UTR5 Human protein_coding chr14:103800802 chr14:103800804 . . 0 23 hm5C_associated_SNPs_87876 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103800778-103800807
64251 chr6 7585987 7585987 1 + C T SKCM 7585985 + 7585965 7586005 41 GGGTCCCGCTCCGGCTCCCGCTCGGGATCTCGCTCCGGATC GGGTCCCGCTCCGGCTCCCGCTTGGGATCTCGCTCCGGATC < 41bp 0.796535158164014 0.584302408308768 0.22907823 0.42217866 prediction 0.424465499710492 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7585985 chr6:7585987 nonsynonymous SNV 0.110 2 23 hm5C_associated_SNPs_87877 0 0 1 RPS3 POSTAR2 ENCODE chr6:7585961-7586025
64251 chr22 18022253 18022253 1 + C T OV 18022251 + 18022231 18022271 41 ACCAGCCTCGCACTCTCGGTCACGTGATGGATTCCCGAGTC ACCAGCCTCGCACTCTCGGTCATGTGATGGATTCCCGAGTC < 41bp 0.712230815038768 0.43334196022739 0.26544517 0.306819 prediction 0.424461630077535 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18022251 chr22:18022253 synonymous SNV . 0 23 hm5C_associated_SNPs_87878 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr22:18022241-18022260
64251 chr4 48344089 48344089 1 + G C rs116061582 48344088 + 48344068 48344108 41 CTTGCTGGACGAGGTGGAGCCGCTGCGGCCCGACGAGCTGG CTTGCTGGACGAGGTGGAGCCCCTGCGGCCCGACGAGCTGG < 41bp 0.712230475008559 0.411791989737262 0.6636216 0.42328426 prediction 0.424460950017118 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48344088 chr4:48344089 synonymous SNV . 0 22 hm5C_associated_SNPs_87879 0 0 1 SF3B1 POSTAR2 ENCODE chr4:48344070-48344136
64251 chr22 44332942 44332942 1 + A T LIHC 44332938 + 44332918 44332958 41 GTGCCCTTCACAGGCATCTGCAACAGGCCCCAGCCAGGCCT GTGCCCTTCACAGGCATCTGCAACTGGCCCCAGCCAGGCCT < 41bp 0.712230011960081 0.386229766713767 0.12882209 0.12394208 prediction 0.424460023920162 Functional Loss - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332938 chr22:44332942 nonsynonymous SNV 0.385 1 25 hm5C_associated_SNPs_87880 0 0 6 PPIG POSTAR2 ENCODE chr22:44332925-44333001
64251 chr19 45179628 45179628 1 + G A UCEC 45179625 + 45179605 45179645 41 ATCATTGGATCTCTTGCTGCCGGGGCCCTTCTCATCAGCTG ATCATTGGATCTCTTGCTGCCGGAGCCCTTCTCATCAGCTG < 41bp 0.820756678783996 0.608528117537481 0.8891771 0.8113766 prediction 0.424457122493029 Functional Loss - CEACAM19 ENSG00000186567 CDS Human protein_coding chr19:45179625 chr19:45179628 synonymous SNV . 0 24 hm5C_associated_SNPs_87882 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45179612-45179640
64251 chr8 145134859 145134859 1 + G A rs557258449 145134856 + 145134836 145134876 41 CCTCTTCCAGATCCGGGGCTCCCGGGCTCGAGCCCTGCCGG CCTCTTCCAGATCCGGGGCTCCCAGGCTCGAGCCCTGCCGG < 41bp 0.712227004646969 0.463542179095812 0.9150183 0.8533452 prediction 0.424454009293939 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145134856 chr8:145134859 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_87885 0 0 9 BUD13 POSTAR2 ENCODE chr8:145134823-145134886
64251 chr17 42827991 42827991 1 + G T SARC 42827989 + 42827969 42828009 41 AAGGCAGGGCTGCGGGCCAGCAGCGATGGACAGAATCACTA AAGGCAGGGCTGCGGGCCAGCATCGATGGACAGAATCACTA < 41bp 0.712222630496559 0.359624902697254 0.1798678 0.081465244 prediction 0.424445260993117 Functional Loss - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42827989 chr17:42827991 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_87888 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:42827989-42827999
64251 chr5 147820753 147820753 1 + C T LGG 147820750 + 147820730 147820770 41 TTGGCTGAGGTCATTACGAGCTGCAGAGCCCAACAGCTTCG TTGGCTGAGGTCATTACGAGCTGTAGAGCCCAACAGCTTCG < 41bp 0.775149595365353 0.56292902370774 0.22171432 0.19164953 prediction 0.424441143315226 Functional Loss - FBXO38 ENSG00000145868 CDS Human protein_coding chr5:147820750 chr5:147820753 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_87891 0 0 2 BUD13 POSTAR2 ENCODE chr5:147820747-147820845
64251 chr15 38643281 38643281 1 + C T SKCM 38643279 + 38643259 38643299 41 TGAGATTGTCAGAATAAACCCTCGAGATATCTTAATACGTC TGAGATTGTCAGAATAAACCCTTGAGATATCTTAATACGTC < 41bp 0.71222040650642 0.419507066691379 0.42373183 0.082900316 prediction 0.42444081301284 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38643279 chr15:38643281 stopgain 1.000 1 23 hm5C_associated_SNPs_87892 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr15:38643270-38643281
64251 chr4 84382343 84382343 1 - G A UCEC 84382345 - 84382325 84382365 41 GTAACGTGATAGAATTTATTCCCGATATCTGATGTTACAAA GTAACGTGATAGAATTTATTCCTGATATCTGATGTTACAAA < 41bp 0.71221793884498 0.483188627620078 0.0642505 0.04059559 prediction 0.424435877689959 Functional Loss - MRPS18C ENSG00000163319 CDS Human protein_coding chr4:84382345 chr4:84382343 nonsynonymous SNV 0.796 0 23 hm5C_associated_SNPs_87894 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:84382340-84382369
64251 chr11 985532 985532 1 + G A COAD 985529 + 985509 985549 41 AAGAAGGTCCAGCACTCCAACGCGAAGAATGCCGTGCTCTT AAGAAGGTCCAGCACTCCAACGCAAAGAATGCCGTGCTCTT < 41bp 0.799340064751458 0.587123636319113 0.7394445 0.24847597 prediction 0.424432856864691 Functional Loss - AP2A2 ENSG00000183020 CDS Human protein_coding chr11:985529 chr11:985532 synonymous SNV . 0 24 hm5C_associated_SNPs_87895 0 0 3 DDX24 POSTAR2 ENCODE chr11:985472-985592
64251 chr19 9490247 9490247 1 + G T UCEC 9490244 + 9490224 9490264 41 GTCTGATCTCCAAGGTGGATCAAGAACAGCTGAAGACAGAT GTCTGATCTCCAAGGTGGATCAATAACAGCTGAAGACAGAT < 41bp 0.712209213551783 0.314686185976319 0.54626656 0.36268133 prediction 0.424418427103566 Functional Loss - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9490244 chr19:9490247 stopgain 0.002 0 24 hm5C_associated_SNPs_87899 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:9490234-9490255
64251 chr8 104337700 104337700 1 + C T PRAD 104337697 + 104337677 104337717 41 CTTGGGTCTCTGATCATTGTCGTCAGTACCATATCCCATGT CTTGGGTCTCTGATCATTGTCGTTAGTACCATATCCCATGT < 41bp 0.739680146818675 0.527471782187616 0.16854131 0.13373429 prediction 0.424416729262117 Functional Loss - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104337697 chr8:104337700 stopgain 1.000 0 24 hm5C_associated_SNPs_87900 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:104337678-104337708
64251 chr2 234113075 234113075 1 + G A LUAD 234113072 + 234113052 234113092 41 TTCACGTGCTCATCCTCTGCCGAGGGCAGGGCGGCCGGCGG TTCACGTGCTCATCCTCTGCCGAAGGCAGGGCGGCCGGCGG < 41bp 0.816496508712141 0.60429390867383 0.87226784 0.60842943 prediction 0.424405200076623 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234113072 chr2:234113075 synonymous SNV . 0 24 hm5C_associated_SNPs_87903 0 0 1 EIF3H POSTAR2 ENCODE chr2:234113056-234113133
64251 chrY 15024901 15024901 1 + G A SKCM 15024898 + 15024878 15024918 41 ACTGTTTTCTGGAGGAAACACGGGGATTAACTTTGAGAAAT ACTGTTTTCTGGAGGAAACACGGAGATTAACTTTGAGAAAT < 41bp 0.762357533811809 0.550157542209536 0.922729 0.9083548 prediction 0.424399983204546 Functional Loss - DDX3Y ENSG00000067048 CDS Human protein_coding chrY:15024898 chrY:15024901 nonsynonymous SNV 0.666 2 24 hm5C_associated_SNPs_87908 0 0 2 U2AF2 POSTAR2 ENCODE chrY:15024861-15024914
64251 chr22 42950004 42950004 1 + A C rs140910717 42950003 + 42949983 42950023 41 CAGGCGTGAGGGAGTGACAGCAGCGCATTCGCGGGACGAGA CAGGCGTGAGGGAGTGACAGCCGCGCATTCGCGGGACGAGA < 41bp 0.712199810979635 0.460956539717109 0.8142651 0.6923121 prediction 0.42439962195927 Functional Loss - SERHL2 ENSG00000183569 UTR5 Human protein_coding chr22:42950003 chr22:42950004 . . 0 22 hm5C_associated_SNPs_87909 0 0 1 DDX3X POSTAR2 ENCODE chr22:42949965-42950049
64251 chr6 54735366 54735366 1 + T C LGG 54735365 + 54735345 54735385 41 GCTCCAAATCTTGACTTAGGCTGGCCATATGTGATGCCCGG GCTCCAAATCTTGACTTAGGCCGGCCATATGTGATGCCCGG < 41bp 0.712199260073921 0.486871506380151 0.16143733 0.25499094 prediction 0.424398520147842 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54735365 chr6:54735366 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_87910 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr6:54735345-54735367
64251 chr4 106766643 106766643 1 + C T LGG 106766640 + 106766620 106766660 41 GGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACT GGATCTGGATCGAGCAAGAGCTGTAGAAGAATGTGGATACT < 41bp 0.712199217942466 0.480456293310156 0.32724574 0.15177003 prediction 0.424398435884932 Functional Loss - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106766640 chr4:106766643 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_87911 0 0 1 BUD13 POSTAR2 ENCODE chr4:106766577-106766674
64251 chr9 139235390 139235390 1 + G A rs200756659 139235387 + 139235367 139235407 41 TGGCGCAGCTGCAGCTGGTGCTCGGCCGCCTGACCAGCCCG TGGCGCAGCTGCAGCTGGTGCTCAGCCGCCTGACCAGCCCG < 41bp 0.712196479797746 0.451171844482387 0.23933601 0.10803327 prediction 0.424392959595491 Functional Loss - GPSM1 ENSG00000160360 CDS Human protein_coding chr9:139235387 chr9:139235390 nonsynonymous SNV 0.295 5 24 hm5C_associated_SNPs_87913 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:139235374-139235398
64251 chr9 96305693 96305693 1 + C T LUAD 96305690 + 96305670 96305710 41 GGCCTGCATGAGGTCGGACACCCCAGCCATGCTCAACCCTG GGCCTGCATGAGGTCGGACACCCTAGCCATGCTCAACCCTG < 41bp 0.763235819299506 0.551043684066817 0.23749834 0.15558356 prediction 0.424384270465378 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96305690 chr9:96305693 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_87916 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:96305646-96305694
64251 chr17 7286790 7286790 1 + C T STAD 7286788 + 7286768 7286808 41 CACAAGGAGCCCACCCTGCCCTCGGACAGCCCACGGCACCT CACAAGGAGCCCACCCTGCCCTTGGACAGCCCACGGCACCT < 41bp 0.821002293358706 0.608817867310701 0.052628636 0.042672157 prediction 0.424368852096009 Functional Loss - TNK1 ENSG00000174292 CDS Human protein_coding chr17:7286788 chr17:7286790 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_87921 0 0 1 BUD13 POSTAR2 ENCODE chr17:7286708-7286796
64251 chr21 47987298 47987298 1 + G A PRAD 47987295 + 47987275 47987315 41 CTCTGCAGTGCCGTATTCACCTGGACCAACCTGCTGGTGGT CTCTGCAGTGCCGTATTCACCTGAACCAACCTGCTGGTGGT < 41bp 0.762918956603323 0.550740323225209 0.7844057 0.29758927 prediction 0.424357266756228 Functional Loss - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47987295 chr21:47987298 stopgain 1.000 1 24 hm5C_associated_SNPs_87923 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr21:47987280-47987300
64251 chr9 102992043 102992043 1 + G T ESCA 102992040 + 102992020 102992060 41 GGGATTCCTGATGTTGAAGGCAAGATCCCACTTCACTGGGC GGGATTCCTGATGTTGAAGGCAATATCCCACTTCACTGGGC < 41bp 0.712159367108433 0.325232544652632 0.24511227 0.1126582 prediction 0.424318734216865 Functional Loss - INVS ENSG00000119509 CDS Human protein_coding chr9:102992040 chr9:102992043 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_87938 0 0 2 GRWD1 POSTAR2 ENCODE chr9:102992025-102992068
64251 chr1 93646321 93646321 1 + G A TGCT 93646318 + 93646298 93646338 41 GCCGGGGTTCGCTGGTTCTCCGAGTTGTGTCCGAGGCTTCC GCCGGGGTTCGCTGGTTCTCCGAATTGTGTCCGAGGCTTCC < 41bp 0.786220302829337 0.574067826738866 0.8995527 0.7083279 prediction 0.424304952180942 Functional Loss - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93646318 chr1:93646321 synonymous SNV . 0 24 hm5C_associated_SNPs_87940 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:93646291-93646322
64251 chr4 123748452 123748452 1 + G T LUAD 123748450 + 123748430 123748470 41 GCAAAAACGGGGGCTTCTTCCTGCGCATCCACCCCGACGGC GCAAAAACGGGGGCTTCTTCCTTCGCATCCACCCCGACGGC < 41bp 0.906392866295745 0.694249715446784 0.21735129 0.09523529 prediction 0.424286301697922 Functional Loss - FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748450 chr4:123748452 synonymous SNV . 0 23 hm5C_associated_SNPs_87949 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:123748440-123748460
64251 chr11 47307122 47307122 1 + G A GBM 47307119 + 47307099 47307139 41 AACACCAGCACCGAGGGCTTCGGGGGCATCATGTCTTTTGC AACACCAGCACCGAGGGCTTCGGAGGCATCATGTCTTTTGC < 41bp 0.712141774569727 0.477426987738779 0.93813026 0.90615624 prediction 0.424283549139455 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47307119 chr11:47307122 synonymous SNV . 0 24 hm5C_associated_SNPs_87950 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr11:47307111-47307125
64251 chr19 12739636 12739636 1 + G A ESCA 12739633 + 12739613 12739653 41 CTTGAGAACTTTCGAAGACACATGATCACCCACACTGGAGA CTTGAGAACTTTCGAAGACACATAATCACCCACACTGGAGA < 41bp 0.712138795145355 0.482830786439051 0.09119254 0.025198877 prediction 0.42427759029071 Functional Loss - ZNF791 ENSG00000173875 CDS Human protein_coding chr19:12739633 chr19:12739636 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_87951 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:12739600-12739640
64251 chr11 70201888 70201888 1 + G A KIRC 70201885 + 70201865 70201905 41 CAAGAAAGAAAAGGGCCGACCTGGACAAACTGGCAAAGAAG CAAGAAAGAAAAGGGCCGACCTGAACAAACTGGCAAAGAAG < 41bp 0.712138518306585 0.471954579267516 0.25370365 0.063868016 prediction 0.424277036613171 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70201885 chr11:70201888 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_87952 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:70201888-70201915
64251 chr17 1680707 1680707 1 + C T CESC 1680704 + 1680684 1680724 41 ACAGACACAGGGGCCCTTCTCTTCATTGGCAAGATTCTGGA ACAGACACAGGGGCCCTTCTCTTTATTGGCAAGATTCTGGA < 41bp 0.775105873963621 0.562969794176721 0.46909356 0.09048718 prediction 0.424272159573801 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1680704 chr17:1680707 synonymous SNV . 0 24 hm5C_associated_SNPs_87953 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:1680665-1680716
64251 chr21 47544599 47544599 1 + G A rs147158850 47544596 + 47544576 47544616 41 TCCCCCTGGTGAGCCAGGCCCTCGGGGGCCAAGAGGAGTCC TCCCCCTGGTGAGCCAGGCCCTCAGGGGCCAAGAGGAGTCC < 41bp 0.712124886056493 0.456768987216797 0.41793507 0.27316633 prediction 0.424249772112987 Functional Loss - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47544596 chr21:47544599 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_87961 2 0 1 DGCR8 POSTAR2 ENCODE chr21:47544572-47544602
64251 chr19 35657168 35657168 1 + C T COAD 35657165 + 35657145 35657185 41 TCTCTGCAGATGAACACACCCTCCGGAAACGGGGGCTGTTG TCTCTGCAGATGAACACACCCTCTGGAAACGGGGGCTGTTG < 41bp 0.712119161738714 0.475240560149429 0.065050304 0.03401786 prediction 0.424238323477429 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35657165 chr19:35657168 nonsynonymous SNV 0.964 4 24 hm5C_associated_SNPs_87965 0 0 7 IGF2BP1 POSTAR2 ENCODE chr19:35657161-35657195
64251 chr17 7984041 7984041 1 + G A SKCM 7984038 + 7984018 7984058 41 GAGTAGCGGAGATTTAAGTTCAGGAACTTGGTGGCCTTAAA GAGTAGCGGAGATTTAAGTTCAGAAACTTGGTGGCCTTAAA < 41bp 0.786105421883115 0.573989927698002 0.80826396 0.56108683 prediction 0.424230988370228 Functional Loss - ALOX12B ENSG00000179477 CDS Human protein_coding chr17:7984038 chr17:7984041 synonymous SNV . 0 24 hm5C_associated_SNPs_87968 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:7984034-7984062
64251 chr6 44115180 44115180 1 + G A UCEC 44115177 + 44115157 44115197 41 AGCAAGGAGAACGTGCCTACCATGATCAACCCCAAGCCCTG AGCAAGGAGAACGTGCCTACCATAATCAACCCCAAGCCCTG < 41bp 0.802758514356925 0.590643226176055 0.117010355 0.090115905 prediction 0.424230576361741 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44115177 chr6:44115180 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_87969 0 0 2 ZNF622 POSTAR2 ENCODE chr6:44115180-44115207
64251 chr15 75094126 75094126 1 + C T UCEC 75094123 + 75094103 75094143 41 AATGTGCTGGTGTCTGAGGACAACGTGGCCAAGGTCAGCGA AATGTGCTGGTGTCTGAGGACAATGTGGCCAAGGTCAGCGA < 41bp 0.712110199029291 0.493168373939142 0.2373805 0.29691905 prediction 0.424220398058583 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75094123 chr15:75094126 synonymous SNV . 0 24 hm5C_associated_SNPs_87972 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:75094110-75094127
64251 chr7 105673986 105673986 1 + A T rs571014543 105673982 + 105673962 105674002 41 ATCACCTAAGGTCAGGAGTTCAAGATCAGCCTGGCCTAGAT ATCACCTAAGGTCAGGAGTTCAAGTTCAGCCTGGCCTAGAT < 41bp 0.712106279315936 0.432141133136325 0.40199548 0.26423907 prediction 0.424212558631871 Functional Loss - CDHR3 ENSG00000128536 UTR3 Human protein_coding chr7:105673982 chr7:105673986 . . 0 25 hm5C_associated_SNPs_87975 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:105673985-105674031
64251 chr20 55213858 55213858 1 + C T rs148562100 55213856 + 55213836 55213876 41 GTAAACTTGAAAAGGGTAGGCACGAAGCAATTTGTTGCTGC GTAAACTTGAAAAGGGTAGGCATGAAGCAATTTGTTGCTGC < 41bp 0.775233586347632 0.56313285195 0.21365869 0.3296914 prediction 0.424201468795264 Functional Loss - TFAP2C ENSG00000087510 UTR3 Human protein_coding chr20:55213856 chr20:55213858 . . 0 23 hm5C_associated_SNPs_87978 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:55213824-55213869
64251 chr14 62229286 62229286 1 + G A HNSC 62229283 + 62229263 62229303 41 TTCACGGAGCTCTGGAGAAACATGAAGTTCGGGACTATCTT TTCACGGAGCTCTGGAGAAACATAAAGTTCGGGACTATCTT < 41bp 0.767033090011545 0.554933722728943 0.7453363 0.78708345 prediction 0.424198734565203 Functional Loss - SNAPC1 ENSG00000023608 CDS Human protein_coding chr14:62229283 chr14:62229286 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_87980 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:62229245-62229289
64251 chr9 96438932 96438932 1 + C T LUAD 96438929 + 96438909 96438949 41 AAGAGGAAGCTGACTCCTAACACCACCTCCCCTTCCACCTC AAGAGGAAGCTGACTCCTAACACTACCTCCCCTTCCACCTC < 41bp 0.712096811471446 0.49886241173225 0.24125814 0.11155397 prediction 0.424193622942892 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96438929 chr9:96438932 synonymous SNV . 0 24 hm5C_associated_SNPs_87981 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:96438917-96438962
64251 chr16 30770348 30770348 1 + G A GBM 30770345 + 30770325 30770365 41 ATCCTCACTTGGCTCTGGCTCTGGTGGGGCCACTGTCTCTA ATCCTCACTTGGCTCTGGCTCTGATGGGGCCACTGTCTCTA < 41bp 0.813980260909542 0.601885192847673 0.52624655 0.34286022 prediction 0.424190136123738 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30770345 chr16:30770348 nonsynonymous SNV 0.152 0 24 hm5C_associated_SNPs_87982 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:30770333-30770354
64251 chr6 21594886 21594886 1 + T C LUSC 21594885 + 21594865 21594905 41 CCCACGCCCGGCTCCACCGCCTCCACGGGCGGCAAGGCCGA CCCACGCCCGGCTCCACCGCCCCCACGGGCGGCAAGGCCGA < 41bp 0.766246022092594 0.554152135280189 0.9410356 0.098511964 prediction 0.424187773624811 Functional Loss - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21594885 chr6:21594886 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_87983 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:21594880-21594900
64251 chr2 36744629 36744629 1 + C T UCEC 36744626 + 36744606 36744646 41 GTGTGAGACAGAGGTGTGCCCACCGCTGCTCTGCCAGAACC GTGTGAGACAGAGGTGTGCCCACTGCTGCTCTGCCAGAACC < 41bp 0.744790413038618 0.532700509675519 0.19018856 0.21829268 prediction 0.424179806726198 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36744626 chr2:36744629 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_87985 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:36744620-36744640
64251 chr15 38643282 38643282 1 + G A CESC 38643279 + 38643259 38643299 41 TGAGATTGTCAGAATAAACCCTCGAGATATCTTAATACGTC TGAGATTGTCAGAATAAACCCTCAAGATATCTTAATACGTC < 41bp 0.71222040650642 0.500133209021109 0.42373183 0.030289829 prediction 0.424174394970622 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38643279 chr15:38643282 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_87987 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:38643270-38643297
64251 chr12 6943117 6943117 1 + G A LUSC 6943114 + 6943094 6943134 41 CTTCTCCTGGAGGGTGTGACCTTGACCCAGGATTCCAGGCA CTTCTCCTGGAGGGTGTGACCTTAACCCAGGATTCCAGGCA < 41bp 0.712084813894901 0.464695042143117 0.6935305 0.32522947 prediction 0.424169627789801 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943114 chr12:6943117 synonymous SNV . 0 24 hm5C_associated_SNPs_87988 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr12:6943111-6943137
64251 chr16 72110706 72110706 1 + G T UCEC 72110704 + 72110684 72110724 41 TGCATAACGCATTATGAAGGCAGCACATGCCCCAAATGGAA TGCATAACGCATTATGAAGGCATCACATGCCCCAAATGGAA < 41bp 0.712080681711034 0.368826087069743 0.090120435 0.052989483 prediction 0.424161363422068 Functional Loss - HPR ENSG00000261701 CDS Human protein_coding chr16:72110704 chr16:72110706 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_87993 0 0 2 SND1 POSTAR2 ENCODE chr16:72110704-72110775
64251 chr16 3349601 3349601 1 - G A UCEC 3349604 - 3349584 3349624 41 AATCAAGGTGTGATCTTGAGCTGCAAACGGCTGTATAGATG AATCAAGGTGTGATCTTGAGCTGTAAACGGCTGTATAGATG < 41bp 0.729828426488088 0.517750584958024 0.03180167 0.03560409 prediction 0.424155683060128 Functional Loss - TIGD7 ENSG00000140993 CDS Human protein_coding chr16:3349604 chr16:3349601 synonymous SNV . 0 24 hm5C_associated_SNPs_87997 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr16:3349586-3349611
64251 chr9 17793390 17793390 1 + A T HNSC 17793388 + 17793368 17793408 41 AAGACAGGCTTCATCTCAGCCTAGAAGGGAATATCAACCTA AAGACAGGCTTCATCTCAGCCTTGAAGGGAATATCAACCTA < 41bp 0.716463672820171 0.504387687605928 0.04191497 0.009563237 prediction 0.424151970428486 Functional Loss - SH3GL2 ENSG00000107295 CDS Human protein_coding chr9:17793388 chr9:17793390 stopgain 1.000 0 23 hm5C_associated_SNPs_87999 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:17793368-17793404
64251 chr1 53675845 53675845 1 + C T COAD 53675842 + 53675822 53675862 41 CCATCCGGTTTCTGAAGACACTCCGGGCTGGCCTTCTGGAG CCATCCGGTTTCTGAAGACACTCTGGGCTGGCCTTCTGGAG < 41bp 0.749252084705115 0.537176419700416 0.17077985 0.09390053 prediction 0.424151330009399 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53675842 chr1:53675845 nonsynonymous SNV 0.786 5 24 hm5C_associated_SNPs_88003 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:53675838-53675854
64251 chr14 21465017 21465017 1 + C T SKCM 21465015 + 21464995 21465035 41 GCTTACTCCGTCTGCGTTTCCTCCATCTACGGCTCAGGATC GCTTACTCCGTCTGCGTTTCCTTCATCTACGGCTCAGGATC < 41bp 0.860427691382506 0.648352930575832 0.956293 0.09532228 prediction 0.424149521613347 Functional Loss - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21465015 chr14:21465017 nonsynonymous SNV 0.017 1 23 hm5C_associated_SNPs_88004 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:21464980-21465020
64251 chr7 127292443 127292443 1 + C T UCEC 127292441 + 127292421 127292461 41 TCCACACATGGCGTCCTCCGCGCAGAGCGGCGGCTCCTCCG TCCACACATGGCGTCCTCCGCGTAGAGCGGCGGCTCCTCCG < 41bp 0.764875920074064 0.552802351043024 0.42198932 0.3190243 prediction 0.424147138062081 Functional Loss - SND1 ENSG00000197157 CDS Human protein_coding chr7:127292441 chr7:127292443 stopgain 1.000 0 23 hm5C_associated_SNPs_88005 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127292440-127292460
64251 chr15 91840618 91840618 1 + C T rs113511052 91840616 + 91840596 91840636 41 CTCCAAATTGAGGGTCTTGGCTCGAAGGACAAAAGCCAGAA CTCCAAATTGAGGGTCTTGGCTTGAAGGACAAAAGCCAGAA < 41bp 0.717265164949199 0.505191765459036 0.4463846 0.117964506 prediction 0.424146798980327 Functional Loss - SV2B ENSG00000185518 UTR3 Human protein_coding chr15:91840616 chr15:91840618 . . 0 23 hm5C_associated_SNPs_88006 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr15:91840600-91840620
64251 chr17 41165103 41165103 1 + G T COAD 41165099 + 41165079 41165119 41 CCCAAGATCCCCCTGGTATTCCGAGGACACACCCAGCAGGA CCCAAGATCCCCCTGGTATTCCGATGACACACCCAGCAGGA < 41bp 0.716148926627172 0.504077917893663 0.84115195 0.4838809 prediction 0.424142017467019 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41165099 chr17:41165103 stopgain 0.679 0 25 hm5C_associated_SNPs_88010 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:41165074-41165106
64251 chr3 9952668 9952668 1 + G A rs61743385 9952665 + 9952645 9952685 41 AAGCTGCCCTCTGCCAGAGGCACGACTGGCATACCCTTTGC AAGCTGCCCTCTGCCAGAGGCACAACTGGCATACCCTTTGC < 41bp 0.80370328708191 0.591633969450425 0.09665024 0.03694451 prediction 0.42413863526297 Functional Loss - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9952665 chr3:9952668 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_88011 0 0 1 GRWD1 POSTAR2 ENCODE chr3:9952604-9952710
64251 chrX 48399742 48399742 1 + C T STAD 48399740 + 48399720 48399760 41 GAAATGTGAGAGCTTCTTGCCGCCAGAGTTCCGCTCTTTTG GAAATGTGAGAGCTTCTTGCCGTCAGAGTTCCGCTCTTTTG < 41bp 0.725408990417578 0.513341219647871 0.8947871 0.3573137 prediction 0.424135541539413 Functional Loss - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48399740 chrX:48399742 nonsynonymous SNV 0.875 0 23 hm5C_associated_SNPs_88013 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chrX:48399731-48399752
64251 chr17 54912463 54912463 1 + G C BLCA 54912462 + 54912442 54912482 41 GAGGGCTGCCTCAGGAAGGCCGACAAGCGCTTCCAGTGCAA GAGGGCTGCCTCAGGAAGGCCCACAAGCGCTTCCAGTGCAA < 41bp 0.712066150386344 0.397898570859121 0.20188749 0.16207162 prediction 0.424132300772687 Functional Loss - DGKE ENSG00000153933 CDS Human protein_coding chr17:54912462 chr17:54912463 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_88014 0 0 1 ZNF622 POSTAR2 ENCODE chr17:54912463-54912564
64251 chr19 3532532 3532532 1 + G C LGG 3532531 + 3532511 3532551 41 GGGCTGCTGGCCTCGGGGGGCGGCACAGCTGACCGCTGTAT GGGCTGCTGGCCTCGGGGGGCCGCACAGCTGACCGCTGTAT < 41bp 0.712065162596561 0.388693535830451 0.88133925 0.4094146 prediction 0.424130325193122 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3532531 chr19:3532532 nonsynonymous SNV 0.750 4 22 hm5C_associated_SNPs_88015 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3532505-3532541
64251 chr19 42399472 42399472 1 + C T BLCA 42399470 + 42399450 42399490 41 GGGAGGCGTGGGGATGCCCTCTCGGGACCGGAATATCGGGG GGGAGGCGTGGGGATGCCCTCTTGGGACCGGAATATCGGGG < 41bp 0.823350671263911 0.611286353446867 0.07154539 0.051269144 prediction 0.424128635634087 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42399470 chr19:42399472 nonsynonymous SNV 0.948 3 23 hm5C_associated_SNPs_88018 0 0 16 DDX24 POSTAR2 ENCODE chr19:42399418-42399472
64251 chr22 46669807 46669807 1 + C T UCEC 46669805 + 46669785 46669825 41 CTCCCACCAGTGATGGGCCACGCCATGGCTACTGGCCTTGT CTCCCACCAGTGATGGGCCACGTCATGGCTACTGGCCTTGT < 41bp 0.712058906470807 0.418674421842637 0.13406613 0.12656367 prediction 0.424117812941614 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46669805 chr22:46669807 nonsynonymous SNV 0.078 1 23 hm5C_associated_SNPs_88023 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:46669796-46669840
64251 chr18 19780715 19780715 1 + A T LUAD 19780711 + 19780691 19780731 41 CAAGATGGGCTCTACATAGGCGTCAGTCTCGCCTCGCCGGC CAAGATGGGCTCTACATAGGCGTCTGTCTCGCCTCGCCGGC < 41bp 0.712052149244277 0.387389249131154 0.4100903 0.6879232 prediction 0.424104298488553 Functional Loss - GATA6 ENSG00000141448 CDS Human protein_coding chr18:19780711 chr18:19780715 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_88029 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr18:19780682-19780716
64251 chr8 133844552 133844552 1 + G T LUAD 133844549 + 133844529 133844569 41 TTCTCCACTAACTCGATCTTCTGGGAGTTCTCTGGCTTCAC TTCTCCACTAACTCGATCTTCTGTGAGTTCTCTGGCTTCAC < 41bp 0.712050444734387 0.322635455325423 0.89648485 0.40755025 prediction 0.424100889468774 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133844549 chr8:133844552 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_88030 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:133844543-133844567
64251 chr8 133844551 133844551 1 + G T LUAD 133844549 + 133844529 133844569 41 TTCTCCACTAACTCGATCTTCTGGGAGTTCTCTGGCTTCAC TTCTCCACTAACTCGATCTTCTTGGAGTTCTCTGGCTTCAC < 41bp 0.712050444734387 0.37440748867299 0.89648485 0.32473937 prediction 0.424100889468774 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133844549 chr8:133844551 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_88031 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:133844543-133844567
64251 chr11 11906050 11906050 1 + G A rs34511735 11906047 + 11906027 11906067 41 ATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCA ATACCAGTGACAAGTCACTTCTCAACGCTAATTTTGAGCCA < 41bp 0.771110137817805 0.559061901264816 0.3774643 0.1564768 prediction 0.424096473105978 Functional Loss - USP47 ENSG00000170242 CDS Human protein_coding chr11:11906047 chr11:11906050 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_88035 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:11906040-11906060
64251 chr1 46877317 46877317 1 + G T HNSC 46877314 + 46877294 46877334 41 AAACTCTGGGAACTGCAGCACGAGATCGAGGTGAGGCCAGA AAACTCTGGGAACTGCAGCACGATATCGAGGTGAGGCCAGA < 41bp 0.712041995059252 0.31676116159898 0.3393079 0.091763735 prediction 0.424083990118503 Functional Loss - FAAH ENSG00000117480 CDS Human protein_coding chr1:46877314 chr1:46877317 nonsynonymous SNV 0.938 0 24 hm5C_associated_SNPs_88038 0 0 2 PPIG POSTAR2 ENCODE chr1:46877289-46877325
64251 chr17 70117650 70117650 1 + G C COAD 70117649 + 70117629 70117669 41 TCGCCCTGCCCGTCGGGCTCCGGCTCGGACACCGAGAACAC TCGCCCTGCCCGTCGGGCTCCCGCTCGGACACCGAGAACAC < 41bp 0.712037191601484 0.393968708242296 0.19329643 0.036175042 prediction 0.424074383202968 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70117649 chr17:70117650 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_88041 0 0 3 DDX6 POSTAR2 ENCODE chr17:70117608-70117655
64251 chr14 93273203 93273203 1 + G A CESC 93273200 + 93273180 93273220 41 CTAATGATGATGGCAAATCACATGAACTGTCTAACCTTCGA CTAATGATGATGGCAAATCACATAAACTGTCTAACCTTCGA < 41bp 0.7721103137947 0.56007546024424 0.15359116 0.031960487 prediction 0.424069707100921 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93273200 chr14:93273203 nonsynonymous SNV 0.554 1 24 hm5C_associated_SNPs_88045 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:93273201-93273239
64251 chr19 42396873 42396873 1 + G A UCEC 42396870 + 42396850 42396890 41 GACCGAGCCAGCTACGAGGCCCGGGAGCGGCACGTGGCGGA GACCGAGCCAGCTACGAGGCCCGAGAGCGGCACGTGGCGGA < 41bp 0.712032802138588 0.471964607008427 0.6291718 0.26450938 prediction 0.424065604277176 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42396870 chr19:42396873 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_88047 0 0 10 BUD13 POSTAR2 ENCODE chr19:42396834-42396900
64251 chr20 18295869 18295869 1 + G A rs142632078 18295866 + 18295846 18295886 41 CCAGCCTGGGGATCCGGGCCCAGGGGACCAGGAGAAGCAGC CCAGCCTGGGGATCCGGGCCCAGAGGACCAGGAGAAGCAGC < 41bp 0.802976126953812 0.590943652899429 0.90279204 0.8799922 prediction 0.424064948108767 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18295866 chr20:18295869 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_88048 0 0 4 GRWD1 POSTAR2 ENCODE chr20:18295816-18295891
64251 chr19 58966988 58966988 1 + C T UCEC 58966986 + 58966966 58967006 41 GGCAGGGATCGCAGAATGGGCGCAGCTTGGCAGGAGCCTCA GGCAGGGATCGCAGAATGGGCGTAGCTTGGCAGGAGCCTCA < 41bp 0.712032262560439 0.483393902412162 0.3030969 0.19004592 prediction 0.424064525120879 Functional Loss - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58966986 chr19:58966988 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_88049 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:58966987-58967009
64251 chr3 157920883 157920883 1 + C T SKCM 157920880 + 157920860 157920900 41 GGTCCAGGTCAAGACCTCGTCTCCGTTCTCATAGTCGTAGC GGTCCAGGTCAAGACCTCGTCTCTGTTCTCATAGTCGTAGC < 41bp 0.729821031378943 0.517796923405591 0.22033417 0.039004117 prediction 0.424048215946704 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157920880 chr3:157920883 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_88055 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr3:157920867-157920901
64251 chr22 39385576 39385576 1 + G A rs142896028 39385573 + 39385553 39385593 41 GAGCGCCTGGACAATGGCACCTGGGTCCTGATGGACCAGCA GAGCGCCTGGACAATGGCACCTGAGTCCTGATGGACCAGCA < 41bp 0.787459312916177 0.575437924971562 0.5782431 0.46624225 prediction 0.424042775889229 Functional Loss - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39385573 chr22:39385576 stopgain 0.030 0 24 hm5C_associated_SNPs_88058 0 0 1 RPS3 POSTAR2 ENCODE chr22:39385538-39385585
64251 chr16 3526273 3526273 1 + C T COAD 3526270 + 3526250 3526290 41 GCGCGCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGAT GCGCGCTCAGCGAGGTCAGCCTGTGCCTCCTCTGCCACGAT < 41bp 0.721671389920327 0.50965464858419 0.13212982 0.123271465 prediction 0.424033482672275 Functional Loss - NAA60 ENSG00000122390;ENSG00000262621 CDS Human other chr16:3526270 chr16:3526273 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88062 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:3526257-3526276
64251 chr20 37617553 37617553 1 + G T LGG 37617550 + 37617530 37617570 41 CTGCACCGACCAGCTGGCCACGAGAATTAAGGTAAAGTGCT CTGCACCGACCAGCTGGCCACGATAATTAAGGTAAAGTGCT < 41bp 0.712016480126965 0.435030399153487 0.28160965 0.016201228 prediction 0.424032960253929 Functional Loss - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37617550 chr20:37617553 nonsynonymous SNV 0.750 2 24 hm5C_associated_SNPs_88063 0 0 5 DDX24 POSTAR2 ENCODE chr20:37617504-37617558
64251 chrX 48675834 48675834 1 + C T GBM 48675832 + 48675812 48675852 41 ACTCTGTGGCTGTGGCTGCTCGCCATGCCCAGACTATCAGT ACTCTGTGGCTGTGGCTGCTCGTCATGCCCAGACTATCAGT < 41bp 0.865707342860031 0.653696884421787 0.44805068 0.061419755 prediction 0.424020916876488 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48675832 chrX:48675834 synonymous SNV . 0 23 hm5C_associated_SNPs_88065 0 0 6 DDX24 POSTAR2 ENCODE chrX:48675820-48675837
64251 chr16 30997780 30997780 1 + G A SKCM 30997777 + 30997757 30997797 41 GATCGAGGCTTGTGTGCAGACCGGAACACGGTTCCTGGTCT GATCGAGGCTTGTGTGCAGACCGAAACACGGTTCCTGGTCT < 41bp 0.809905553127571 0.597897198677808 0.34171757 0.263838 prediction 0.424016708899527 Functional Loss - HSD3B7 ENSG00000099377 CDS Human protein_coding chr16:30997777 chr16:30997780 nonsynonymous SNV 0.558 3 24 hm5C_associated_SNPs_88067 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:30997755-30997780
64251 chr8 145608351 145608351 1 + C T UCEC 145608349 + 145608329 145608369 41 TAGTGGGGGCGCCCCTGCTCCTCGGAGCCCGCTATGTCATG TAGTGGGGGCGCCCCTGCTCCTTGGAGCCCGCTATGTCATG < 41bp 0.832929777499037 0.620931863607749 0.5916803 0.14092723 prediction 0.423995827782576 Functional Loss - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145608349 chr8:145608351 synonymous SNV . 0 23 hm5C_associated_SNPs_88070 0 0 2 DDX24 POSTAR2 ENCODE chr8:145608325-145608353
64251 chr8 144681126 144681126 1 + G T LUSC 144681124 + 144681104 144681144 41 TGCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCTGCTGGTG TGCGCCGAAGCTGCCTGCAGCATAAGGCCGTGCTGCTGGTG < 41bp 0.711996883262627 0.364181379973331 0.38528988 0.19346726 prediction 0.423993766525255 Functional Loss - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681124 chr8:144681126 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_88071 0 0 2 RBM15 POSTAR2 ENCODE chr8:144681086-144681155
64251 chr17 34945832 34945832 1 + A C UCEC 34945828 + 34945808 34945848 41 TAGTGGCTGGTTGACAACGGCTGGAGCAAATTAAATAAATA TAGTGGCTGGTTGACAACGGCTGGCGCAAATTAAATAAATA < 41bp 0.711996044013618 0.31227907145706 0.1077314 0.0644629 prediction 0.423992088027236 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34945828 chr17:34945832 synonymous SNV . 0 25 hm5C_associated_SNPs_88072 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:34945805-34945834
64251 chr2 70315671 70315671 1 + G A BLCA 70315668 + 70315648 70315688 41 CCGGAATTGACTCCAGCTCTCCAGAGGTGAAAGGCTATTGG CCGGAATTGACTCCAGCTCTCCAAAGGTGAAAGGCTATTGG < 41bp 0.780176621305152 0.568180634873858 0.925871 0.51096106 prediction 0.423991972862589 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315668 chr2:70315671 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_88073 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70315615-70315694
64251 chrX 153061903 153061903 1 + G T UCEC 153061900 + 153061880 153061920 41 TCCCCGCAGCCGAGGCCTGCCTGGAGCCCCAGATCACCCCT TCCCCGCAGCCGAGGCCTGCCTGTAGCCCCAGATCACCCCT < 41bp 0.934740427772409 0.722749168114624 0.107455045 0.23258355 prediction 0.423982519315571 Functional Loss - SSR4 ENSG00000180879 CDS Human protein_coding chrX:153061900 chrX:153061903 stopgain 0.983 1 24 hm5C_associated_SNPs_88074 0 0 24 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:153061888-153061944
64251 chr7 2472430 2472430 1 + C T SKCM 2472428 + 2472408 2472448 41 CGGGGCCGCCGCTGCCCACGCCCGGGCCGGACAGGGACAGG CGGGGCCGCCGCTGCCCACGCCTGGGCCGGACAGGGACAGG < 41bp 0.78386983104993 0.571886316509049 0.07593131 0.1254029 prediction 0.423967029081762 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472428 chr7:2472430 synonymous SNV . 0 23 hm5C_associated_SNPs_88083 0 0 2 DDX3X POSTAR2 ENCODE chr7:2472408-2472444
64251 chr17 40093047 40093047 1 + G A BLCA 40093044 + 40093024 40093064 41 GCCCAGCAGAAGCCTCAGCCCATGAAACACCTCTTACACCC GCCCAGCAGAAGCCTCAGCCCATAAAACACCTCTTACACCC < 41bp 0.769343725439218 0.557362950441875 0.0799596 0.03455773 prediction 0.423961549994688 Functional Loss - TTC25 ENSG00000204815 ncRNA_exonic Human protein_coding chr17:40093044 chr17:40093047 . 0.397 0 24 hm5C_associated_SNPs_88086 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:40093041-40093071
64251 chr2 219452397 219452397 1 + T C UCEC 219452396 + 219452376 219452416 41 ATGTTTGCGAATTATGGAATCTGGAAGTGAACTTTCTAAAA ATGTTTGCGAATTATGGAATCCGGAAGTGAACTTTCTAAAA < 41bp 0.711967782089087 0.470604772042876 0.23449549 0.3347816 prediction 0.423935564178174 Functional Loss - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219452396 chr2:219452397 synonymous SNV . 0 22 hm5C_associated_SNPs_88093 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:219452313-219452405
64251 chr19 52877582 52877582 1 + C T SKCM 52877580 + 52877560 52877600 41 CTTCCTGACCTGAGTGTTATCTCCATGTTGGAGCAAAGGAG CTTCCTGACCTGAGTGTTATCTTCATGTTGGAGCAAAGGAG < 41bp 0.863519846780443 0.651555442544136 0.95431054 0.39245334 prediction 0.423928808472613 Functional Loss - ZNF880 ENSG00000221923 CDS Human protein_coding chr19:52877580 chr19:52877582 nonsynonymous SNV 0.226 0 23 hm5C_associated_SNPs_88094 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:52877580-52877600
64251 chr19 46198855 46198855 1 + C T GBM 46198853 + 46198833 46198873 41 ACCCTTGCCTGCCATTATGACTCGAAGCTCTTCCCACCCGG ACCCTTGCCTGCCATTATGACTTGAAGCTCTTCCCACCCGG < 41bp 0.867485219195711 0.65552267169082 0.9359826 0.27375668 prediction 0.423925095009783 Functional Loss - QPCTL ENSG00000011478 CDS Human protein_coding chr19:46198853 chr19:46198855 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_88098 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:46198853-46198887
64251 chr22 50639915 50639915 1 + G A rs190207485 50639912 + 50639892 50639932 41 CACCAATTCGGCCAGTTCGCCGGGCAGCTGGGCGACGGCGC CACCAATTCGGCCAGTTCGCCGGACAGCTGGGCGACGGCGC < 41bp 0.800267602675497 0.588305277634797 0.9367951 0.9112794 prediction 0.423924650081399 Functional Loss - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50639912 chr22:50639915 unknown . 0 24 hm5C_associated_SNPs_88099 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:50639885-50639937
64251 chrX 48558859 48558859 1 + C T UCEC 48558856 + 48558836 48558876 41 CTCAACCAGGTGGCTGTGGGCTGCGAGTGCCAGGACTGTCT CTCAACCAGGTGGCTGTGGGCTGTGAGTGCCAGGACTGTCT < 41bp 0.738707555674586 0.526747948195348 0.21587881 0.19869867 prediction 0.423919214958475 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48558856 chrX:48558859 synonymous SNV . 0 24 hm5C_associated_SNPs_88101 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chrX:48558818-48558873
64251 chr3 47385400 47385400 1 + G T LUAD 47385398 + 47385378 47385418 41 GCGTGCCATGAGGGAGGGGTCGGTGTGGGCTGCATCCCTCT GCGTGCCATGAGGGAGGGGTCGTTGTGGGCTGCATCCCTCT < 41bp 0.711957600805506 0.377396209990536 0.7271567 0.37910533 prediction 0.423915201611012 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385398 chr3:47385400 nonsynonymous SNV 0.781 4 23 hm5C_associated_SNPs_88104 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:47385380-47385400
64251 chr16 67006645 67006645 1 + A C UCEC 67006641 + 67006621 67006661 41 GCCCAGTGGACCCACTTTGCCCGGACAGGGTGAGTGAGTGA GCCCAGTGGACCCACTTTGCCCGGCCAGGGTGAGTGAGTGA < 41bp 0.711956621727162 0.29866991522065 0.012387037 0.02684921 prediction 0.423913243454324 Functional Loss - CES3 ENSG00000172828 CDS Human protein_coding chr16:67006641 chr16:67006645 nonsynonymous SNV 0.018 3 25 hm5C_associated_SNPs_88106 0 0 1 GRWD1 POSTAR2 ENCODE chr16:67006635-67006649
64251 chr17 1649039 1649039 1 + G A SKCM 1649036 + 1649016 1649056 41 GACTGCCCTGAAGAGTCCCCCAGGAGTCTGCAGCAGAGACC GACTGCCCTGAAGAGTCCCCCAGAAGTCTGCAGCAGAGACC < 41bp 0.79239523083213 0.580439660144911 0.90173733 0.60356975 prediction 0.423911141374437 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1649036 chr17:1649039 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_88107 0 0 2 RPS3 POSTAR2 ENCODE chr17:1649026-1649063
64251 chr15 67073733 67073733 1 + G A STAD 67073730 + 67073710 67073750 41 GCTCGGGCCTGCAGCACGCGCCCGAGCCCGACGCCGCCGAC GCTCGGGCCTGCAGCACGCGCCCAAGCCCGACGCCGCCGAC < 41bp 0.806957375385818 0.595001907872689 0.21304697 0.051069796 prediction 0.423910935026257 Functional Loss - SMAD6 ENSG00000137834 CDS Human protein_coding chr15:67073730 chr15:67073733 nonsynonymous SNV 0.617 1 24 hm5C_associated_SNPs_88108 0 0 1 YBX3 POSTAR2 ENCODE chr15:67073676-67073739
64251 chrX 56590464 56590464 1 + C T UCEC 56590462 + 56590442 56590482 41 TTCGCGGTGCCCGAGAACAGCTCGGTTCAGCAGTTTAAGGA TTCGCGGTGCCCGAGAACAGCTTGGTTCAGCAGTTTAAGGA < 41bp 0.832687514470048 0.620733894667576 0.1478976 0.17850623 prediction 0.423907239604945 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590462 chrX:56590464 nonsynonymous SNV 0.665 3 23 hm5C_associated_SNPs_88109 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:56590460-56590480
64251 chr20 33045246 33045246 1 + G A PAAD 33045243 + 33045223 33045263 41 ATATTTCGTCAACCACAACACACGAATTACACAATGGGAAG ATATTTCGTCAACCACAACACACAAATTACACAATGGGAAG < 41bp 0.767115182045937 0.555165349519918 0.06312394 0.03312087 prediction 0.423899665052038 Functional Loss - ITCH ENSG00000078747 CDS Human protein_coding chr20:33045243 chr20:33045246 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_88113 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:33045221-33045246
64251 chr14 76965199 76965199 1 + G T LUAD 76965197 + 76965177 76965217 41 CCCCCTCCCCCATCTGTGGCCTGGGTGGGCACTGCTCAGGC CCCCCTCCCCCATCTGTGGCCTTGGTGGGCACTGCTCAGGC < 41bp 0.71194696734607 0.350825599646081 0.556599 0.34459966 prediction 0.423893934692139 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76965197 chr14:76965199 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_88115 0 0 3 BUD13 POSTAR2 ENCODE chr14:76965177-76965233
64251 chr11 2417893 2417893 1 + C T rs14077 2417890 + 2417870 2417910 41 CAGAAGATCGATGACCTCTTCTCCGGGAAGCTGTACCTCAT CAGAAGATCGATGACCTCTTCTCTGGGAAGCTGTACCTCAT < 41bp 0.764367083191654 0.55242382240693 0.3723849 0.53414756 prediction 0.423886521569449 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2417890 chr11:2417893 synonymous SNV . 0 24 hm5C_associated_SNPs_88119 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:2417855-2417907
64251 chr19 58118418 58118418 1 + C T rs62126240 58118415 + 58118395 58118435 41 TCCGAAAAACCCACCTCATTCGACACCAGACTGTTCACACT TCCGAAAAACCCACCTCATTCGATACCAGACTGTTCACACT < 41bp 0.738327877033706 0.526388208878387 0.1794641 0.1948348 prediction 0.423879336310638 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58118415 chr19:58118418 nonsynonymous SNV 0.002 4 24 hm5C_associated_SNPs_88124 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:58118398-58118430
64251 chr5 102612226 102612226 1 + T C rs553747314 102612225 + 102612205 102612245 41 CCGAGGGGACCGTGTGTTTGCTAGGAATAATACATGAATGA CCGAGGGGACCGTGTGTTTGCCAGGAATAATACATGAATGA < 41bp 0.711937272705094 0.483748953440871 0.2016285 0.35459274 prediction 0.423874545410187 Functional Loss - C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102612225 chr5:102612226 synonymous SNV . 0 22 hm5C_associated_SNPs_88127 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:102612220-102612240
64251 chr10 114173040 114173040 1 + G A UCEC 114173037 + 114173017 114173057 41 CACATTGTTTCCCGCGGTGCCTCGACTCCTTAACAGGATCT CACATTGTTTCCCGCGGTGCCTCAACTCCTTAACAGGATCT < 41bp 0.791573021368621 0.579637748163987 0.106978714 0.061934203 prediction 0.423870546409267 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114173037 chr10:114173040 nonsynonymous SNV 0.979 4 24 hm5C_associated_SNPs_88132 0 0 2 PPIG POSTAR2 ENCODE chr10:114173013-114173065
64251 chr11 65824372 65824372 1 + C T BLCA 65824370 + 65824350 65824390 41 CAAGATGGGCACCCCAGTCCCTCGGCCCCCACAAGACATGG CAAGATGGGCACCCCAGTCCCTTGGCCCCCACAAGACATGG < 41bp 0.858480317377567 0.646545867276894 0.07055277 0.08411726 prediction 0.423868900201345 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65824370 chr11:65824372 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_88135 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65824345-65824378
64251 chr1 37947259 37947259 1 + G A DLBC 37947256 + 37947236 37947276 41 GATCCTGGTGTTCACACCATCACGACGCGTGGGTGGCAAGC GATCCTGGTGTTCACACCATCACAACGCGTGGGTGGCAAGC < 41bp 0.809735675440539 0.597802590408079 0.20206404 0.18960285 prediction 0.42386617006492 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37947256 chr1:37947259 nonsynonymous SNV 0.061 4 24 hm5C_associated_SNPs_88137 0 0 1 BUD13 POSTAR2 ENCODE chr1:37947202-37947290
64251 chrX 47100702 47100702 1 + C T UCEC 47100699 + 47100679 47100719 41 CTCAGCAATGTGCCACAGCTCACCGAGTACTTCCTCAACAA CTCAGCAATGTGCCACAGCTCACTGAGTACTTCCTCAACAA < 41bp 0.724286430066459 0.512353969535074 0.3256606 0.30824554 prediction 0.42386492106277 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47100699 chrX:47100702 synonymous SNV . 0 24 hm5C_associated_SNPs_88138 0 0 11 CPSF4 POSTAR2 GSE37401,GSM917666 chrX:47100683-47100719
64251 chr16 31089640 31089640 1 + G T UCEC 31089638 + 31089618 31089658 41 CCATGAAGAACCACTTGCGCCGGCACAGTCGGCGGCGGAGC CCATGAAGAACCACTTGCGCCGTCACAGTCGGCGGCGGAGC < 41bp 0.71193154609055 0.369418832712836 0.26324522 0.1816735 prediction 0.423863092181099 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089638 chr16:31089640 synonymous SNV . 0 23 hm5C_associated_SNPs_88139 0 0 1 SLTM POSTAR2 ENCODE chr16:31089634-31089682
64251 chr1 19582539 19582539 1 + A C GBM 19582538 + 19582518 19582558 41 ACATCCGGAACGCCTGGAAGCACAGCCGGTGAGCGGGCAGG ACATCCGGAACGCCTGGAAGCCCAGCCGGTGAGCGGGCAGG < 41bp 0.711927974523198 0.446134887203384 0.63551927 0.31464803 prediction 0.423855949046395 Functional Loss - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19582538 chr1:19582539 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_88141 0 0 5 GRWD1 POSTAR2 ENCODE chr1:19582467-19582541
64251 chrX 153609158 153609158 1 + G C rs2070818 153609154 + 153609134 153609174 41 TCTTCTTCTGAAGAGGAGTGCAAGGATAGGTGCGTAGTGGG TCTTCTTCTGAAGAGGAGTGCAAGCATAGGTGCGTAGTGGG < 41bp 0.711927859937666 0.419974171006406 0.5777426 0.19347143 prediction 0.423855719875331 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153609154 chrX:153609158 nonsynonymous SNV 0.952 3 25 hm5C_associated_SNPs_88142 1 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:153609131-153609160
64251 chr2 128186321 128186321 1 + G T CESC 128186319 + 128186299 128186339 41 CGGGCATCCTCGGGGACCGGCAGGATGCCTGCGAGGGCGAC CGGGCATCCTCGGGGACCGGCATGATGCCTGCGAGGGCGAC < 41bp 0.919032399099866 0.707108482491764 0.92687994 0.9019772 prediction 0.423847833216203 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128186319 chr2:128186321 nonsynonymous SNV 0.007 3 23 hm5C_associated_SNPs_88148 0 0 4 EIF3H POSTAR2 ENCODE chr2:128186294-128186352
64251 chr1 66058404 66058404 1 + A C UCEC 66058400 + 66058380 66058420 41 GGCAGTTTTCAGATGGTTCACTGCAATTGCAGTGTTCATGA GGCAGTTTTCAGATGGTTCACTGCCATTGCAGTGTTCATGA < 41bp 0.711923142688122 0.302032038224611 0.11733261 0.09700945 prediction 0.423846285376243 Functional Loss - LEPR ENSG00000116678 CDS Human protein_coding chr1:66058400 chr1:66058404 nonsynonymous SNV 0.197 3 25 hm5C_associated_SNPs_88149 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:66058384-66058443
64251 chr2 234113057 234113057 1 + G A rs7346 234113054 + 234113034 234113074 41 GCGCCCCGGCTGCGCTCCTTCACGTGCTCATCCTCTGCCGA GCGCCCCGGCTGCGCTCCTTCACATGCTCATCCTCTGCCGA < 41bp 0.813341603608674 0.601421155238331 0.43934035 0.39187542 prediction 0.423840896740686 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234113054 chr2:234113057 synonymous SNV . 0 24 hm5C_associated_SNPs_88153 0 0 1 EIF3H POSTAR2 ENCODE chr2:234113056-234113133
64251 chr1 65145388 65145388 1 + C T LUAD 65145385 + 65145365 65145405 41 TCCTGGCGGTGTATGCCTACCGCCACCAGATTCATCGCCGG TCCTGGCGGTGTATGCCTACCGCTACCAGATTCATCGCCGG < 41bp 0.760814766356084 0.548896271829055 0.18778643 0.16908154 prediction 0.423836989054058 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65145385 chr1:65145388 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_88154 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:65145387-65145411
64251 chr16 67670670 67670670 1 + C T HNSC 67670668 + 67670648 67670688 41 AATTGAACCTGAGCCAGAGCCTCAGCCTGTGACCCCAGCCC AATTGAACCTGAGCCAGAGCCTTAGCCTGTGACCCCAGCCC < 41bp 0.711914545127623 0.417891629112579 0.37249625 0.38802248 prediction 0.423829090255246 Functional Loss - CTCF ENSG00000102974 CDS Human protein_coding chr16:67670668 chr16:67670670 stopgain 0.998 0 23 hm5C_associated_SNPs_88161 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67670608-67670671
64251 chr17 37900916 37900916 1 + G A GBM 37900913 + 37900893 37900933 41 ACTGACTTCGGTTTCTGTGTCAAGGTGAAGACCTGGCCAGG ACTGACTTCGGTTTCTGTGTCAAAGTGAAGACCTGGCCAGG < 41bp 0.822808745664963 0.610911064437603 0.90673685 0.5883132 prediction 0.423795362454719 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37900913 chr17:37900916 synonymous SNV . 0 24 hm5C_associated_SNPs_88171 0 0 3 PPIG POSTAR2 ENCODE chr17:37900915-37900946
64251 chr1 24082459 24082459 1 + C T BRCA 24082456 + 24082436 24082476 41 GGCTTCAGGACGCCCGAGAGCAGCGGCTACGAGTACTAACA GGCTTCAGGACGCCCGAGAGCAGTGGCTACGAGTACTAACA < 41bp 0.72293394438014 0.51103760991991 0.8273341 0.42040607 prediction 0.42379266892046 Functional Loss - ELOA ENSG00000011007 CDS Human protein_coding chr1:24082456 chr1:24082459 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_88172 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:24082458-24082504
64251 chr19 38573136 38573136 1 + G A BLCA 38573133 + 38573113 38573153 41 GGAAGCTAAGGAGCAGCAAACCCGAGGGGGAGGCTGGGCGT GGAAGCTAAGGAGCAGCAAACCCAAGGGGGAGGCTGGGCGT < 41bp 0.711892452740724 0.459984515779108 0.884016 0.6683891 prediction 0.423784905481449 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573133 chr19:38573136 nonsynonymous SNV 0.047 1 24 hm5C_associated_SNPs_88177 0 0 2 BUD13 POSTAR2 ENCODE chr19:38573115-38573153
64251 chr4 150999539 150999539 1 + G T rs551084816 150999535 + 150999515 150999555 41 CAGTGGGCCGGGCCTGACCGCTGCGTGGGAGGCGGGCTGCA CAGTGGGCCGGGCCTGACCGCTGCTTGGGAGGCGGGCTGCA < 41bp 0.711889671503787 0.499050790302244 0.65970385 0.24776027 prediction 0.423779343007573 Functional Loss - DCLK2 ENSG00000170390 UTR5 Human protein_coding chr4:150999535 chr4:150999539 . . 0 25 hm5C_associated_SNPs_88179 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:150999515-150999554
64251 chr17 30774031 30774031 1 + G A LUAD 30774028 + 30774008 30774048 41 AAGAGCAGAGCATCCTGGAACTGGGATCTCTCCTGGCAAAG AAGAGCAGAGCATCCTGGAACTGAGATCTCTCCTGGCAAAG < 41bp 0.815485054281571 0.60359622158582 0.88888466 0.41361126 prediction 0.423777665391502 Functional Loss - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30774028 chr17:30774031 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88181 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30773966-30774064
64251 chr4 83978514 83978514 1 + T C LUSC 83978513 + 83978493 83978533 41 TAGTCCACGAAAGTGAAAGACTAGAGGCCTTAAAACATGCT TAGTCCACGAAAGTGAAAGACCAGAGGCCTTAAAACATGCT < 41bp 0.711881223889564 0.44706262865108 0.42640615 0.5920016 prediction 0.423762447779128 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83978513 chr4:83978514 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_88189 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:83978498-83978523
64251 chr12 57961359 57961359 1 + C T UCEC 57961357 + 57961337 57961377 41 ACATGGAAACGGAGCAGAAGCTCAGTGGGAAGCTGTATCTG ACATGGAAACGGAGCAGAAGCTTAGTGGGAAGCTGTATCTG < 41bp 0.711878013440754 0.425284624818311 0.2622339 0.2805488 prediction 0.423756026881507 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57961357 chr12:57961359 synonymous SNV . 0 23 hm5C_associated_SNPs_88192 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr12:57961340-57961360
64251 chr10 126671865 126671865 1 + G A UCEC 126671862 + 126671842 126671882 41 GGGAGAAACTTTAGGATATACTCGGTTTCAAGGTAAGCCAT GGGAGAAACTTTAGGATATACTCAGTTTCAAGGTAAGCCAT < 41bp 0.772726967402235 0.560851905224063 0.06747615 0.04982865 prediction 0.423750124356344 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126671862 chr10:126671865 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_88195 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr10:126671826-126671865
64251 chr15 41021818 41021818 1 + C T MESO 41021815 + 41021795 41021835 41 CCAGGTTTCTGCGGATGCTTCTGCGACTCGCTGATGAGGTA CCAGGTTTCTGCGGATGCTTCTGTGACTCGCTGATGAGGTA < 41bp 0.767705708694862 0.555833438572305 0.2994741 0.29549518 prediction 0.423744540245114 Functional Loss - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41021815 chr15:41021818 stopgain 0.998 1 24 hm5C_associated_SNPs_88197 1 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:41021803-41021827
64251 chr12 57921393 57921393 1 + C T HNSC 57921391 + 57921371 57921411 41 CTGGGCAAGGCCCCCTCCAACTCAGGGAGACCCCCCCAACT CTGGGCAAGGCCCCCTCCAACTTAGGGAGACCCCCCCAACT < 41bp 0.711869638993673 0.43714215502908 0.9255184 0.8624748 prediction 0.423739277987346 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921391 chr12:57921393 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_88199 0 0 3 DDX55 POSTAR2 ENCODE chr12:57921360-57921429
64251 chr3 196457870 196457870 1 + G A rs78867326 196457867 + 196457847 196457887 41 CTACCACTTTTCTCAGAGTTCCCGATTTTGAAATGCTGGGC CTACCACTTTTCTCAGAGTTCCCAATTTTGAAATGCTGGGC < 41bp 0.711866622156849 0.471544378747147 0.01897201 0.06348166 prediction 0.423733244313699 Functional Loss - PIGX ENSG00000163964 CDS Human protein_coding chr3:196457867 chr3:196457870 synonymous SNV . 0 24 hm5C_associated_SNPs_88204 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:196457860-196457895
64251 chr8 87570620 87570620 1 + G A COAD 87570617 + 87570597 87570637 41 CTTCCTCCCAAGAACCCAGCCACGAAACAACAGAAGCAGTG CTTCCTCCCAAGAACCCAGCCACAAAACAACAGAAGCAGTG < 41bp 0.739517921892929 0.527652131038479 0.04027942 0.20755604 prediction 0.4237315817089 Functional Loss - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87570617 chr8:87570620 synonymous SNV . 0 24 hm5C_associated_SNPs_88207 0 0 2 IGF2BP1 POSTAR2 ENCODE chr8:87570573-87570654
64251 chr11 60609827 60609827 1 + G A UCEC 60609824 + 60609804 60609844 41 ACCCCGTCTGCAGCAGGGTGCAGGCTTGGAGTCACCCCAAG ACCCCGTCTGCAGCAGGGTGCAGACTTGGAGTCACCCCAAG < 41bp 0.821325747043544 0.609462727613114 0.7675957 0.19400617 prediction 0.423726038860861 Functional Loss - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609824 chr11:60609827 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_88208 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:60609820-60609840
64251 chr6 149887639 149887639 1 + C T rs532883672 149887637 + 149887617 149887657 41 GGCTGGCTGACGACGGGCGCCCCCGAGCCGCCGCCGCTGTC GGCTGGCTGACGACGGGCGCCCTCGAGCCGCCGCCGCTGTC < 41bp 0.75686198764498 0.545000196734155 0.2825089 0.20243531 prediction 0.42372358182165 Functional Loss - GINM1 ENSG00000055211 CDS Human protein_coding chr6:149887637 chr6:149887639 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_88210 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585665 chr6:149887611-149887641
64251 chr3 111710446 111710446 1 + A C rs150288585 111710445 + 111710425 111710465 41 GTTGCCGATCGAGTACTCAGCACAGATGTGGATGTCATCCT GTTGCCGATCGAGTACTCAGCCCAGATGTGGATGTCATCCT < 41bp 0.819128727562176 0.607268280303386 0.28529114 0.20388314 prediction 0.42372089451758 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111710445 chr3:111710446 nonsynonymous SNV 0.921 0 22 hm5C_associated_SNPs_88212 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:111710427-111710460
64251 chr17 48745100 48745100 1 + G A SKCM 48745097 + 48745077 48745117 41 CACACCACAACCACCTTCACCTGGATGTGCAGCCCCTTCCT CACACCACAACCACCTTCACCTGAATGTGCAGCCCCTTCCT < 41bp 0.828624164564984 0.61677032640828 0.67100984 0.28600773 prediction 0.423707676313408 Functional Loss - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745097 chr17:48745100 stopgain 0.016 0 24 hm5C_associated_SNPs_88216 0 0 1 PRPF8 POSTAR2 ENCODE chr17:48745092-48745159
64251 chr12 110019245 110019245 1 + C T UCEC 110019243 + 110019223 110019263 41 TAGTGTGGTCGGAGCTGCCCCCCGGGGCGGGCTTGGGCTCC TAGTGTGGTCGGAGCTGCCCCCTGGGGCGGGCTTGGGCTCC < 41bp 0.83268657123635 0.62083407211715 0.5511122 0.7222422 prediction 0.423704998238401 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110019243 chr12:110019245 synonymous SNV . 0 23 hm5C_associated_SNPs_88217 0 0 1 METAP2 POSTAR2 ENCODE chr12:110019199-110019280
64251 chr5 7892945 7892945 1 + G T LUAD 7892942 + 7892922 7892962 41 CGGAAGGGAGTATGTACAGGCTGGCTGGCCTTGTTGGTTGC CGGAAGGGAGTATGTACAGGCTGTCTGGCCTTGTTGGTTGC < 41bp 0.711849825277883 0.321694524546011 0.06337401 0.018680543 prediction 0.423699650555766 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7892942 chr5:7892945 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_88218 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:7892940-7892960
64251 chr5 68413208 68413208 1 + G A LGG 68413205 + 68413185 68413225 41 GATGAGTAGGTGGAAAGCCACTCGGATTTTCTCCTATGGGT GATGAGTAGGTGGAAAGCCACTCAGATTTTCTCCTATGGGT < 41bp 0.793184275045204 0.581341474053683 0.3212539 0.07357004 prediction 0.423685601983043 Functional Loss - SLC30A5 ENSG00000145740 CDS Human protein_coding chr5:68413205 chr5:68413208 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_88226 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:68413197-68413222
64251 chr7 2473140 2473140 1 + G A PAAD 2473137 + 2473117 2473157 41 CACCAGCCTGCCCGCCTCGGCGCGCGAGGCCTTCCGCGCTG CACCAGCCTGCCCGCCTCGGCGCACGAGGCCTTCCGCGCTG < 41bp 0.822251766491976 0.610420453204527 0.491457 0.21788839 prediction 0.423662626574898 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473137 chr7:2473140 nonsynonymous SNV 0.457 0 24 hm5C_associated_SNPs_88236 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2473130-2473194
64251 chr3 56651568 56651568 1 + C T SKCM 56651566 + 56651546 56651586 41 CTCTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCAT CTCTCAAAACAGAGGCATTTCATCAGAAATTTTTCATTCAT < 41bp 0.711820871688384 0.435244511388179 0.2763642 0.11771363 prediction 0.423641743376768 Functional Loss - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56651566 chr3:56651568 nonsynonymous SNV 0.942 0 23 hm5C_associated_SNPs_88242 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:56651560-56651580
64251 chr10 115664694 115664694 1 + C T rs150975627 115664691 + 115664671 115664711 41 CATTAGGCTTTCCCCCGTGACTGCGTGTGCTGGCCAGACTC CATTAGGCTTTCCCCCGTGACTGTGTGTGCTGGCCAGACTC < 41bp 0.711811474300592 0.487667432647688 0.027468085 0.012570143 prediction 0.423622948601184 Functional Loss - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115664691 chr10:115664694 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_88246 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:115664657-115664713
64251 chr2 73446021 73446021 1 + G A BLCA 73446018 + 73445998 73446038 41 CTGTTTGCCACACAGCTCATCCGGAAGGGGGAGACCATCTT CTGTTTGCCACACAGCTCATCCGAAAGGGGGAGACCATCTT < 41bp 0.711810013781197 0.465744173068046 0.4127354 0.09675115 prediction 0.423620027562393 Functional Loss - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73446018 chr2:73446021 synonymous SNV . 0 24 hm5C_associated_SNPs_88247 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:73446012-73446040
64251 chr8 144681434 144681434 1 + T C PRAD 144681433 + 144681413 144681453 41 ACTTCATGCGCAGCTTCATGCTCAAGGACATGCTCTACCTG ACTTCATGCGCAGCTTCATGCCCAAGGACATGCTCTACCTG < 41bp 0.804007765709446 0.592204938146966 0.24492794 0.038152963 prediction 0.423605655124959 Functional Loss - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681433 chr8:144681434 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_88249 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:144681401-144681452
64251 chr22 38469033 38469033 1 + C T SKCM 38469031 + 38469011 38469051 41 TGACGGATCTGAACACGTACCTCAACAAAGCCATCCCGGAC TGACGGATCTGAACACGTACCTTAACAAAGCCATCCCGGAC < 41bp 0.711797310041885 0.417340933594847 0.2791512 0.049369156 prediction 0.423594620083771 Functional Loss - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38469031 chr22:38469033 synonymous SNV . 0 23 hm5C_associated_SNPs_88256 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:38469016-38469068
64251 chrX 47030480 47030480 1 + G T LUSC 47030478 + 47030458 47030498 41 CTCAGCGTAGGCGGCGGCGGCGGCACAGGCACAGCCCCACC CTCAGCGTAGGCGGCGGCGGCGTCACAGGCACAGCCCCACC < 41bp 0.907573338271417 0.695778274732436 0.895551 0.8441695 prediction 0.423590127077962 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47030478 chrX:47030480 synonymous SNV . 0 23 hm5C_associated_SNPs_88259 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chrX:47030449-47030485
64251 chr16 2514737 2514737 1 + G A rs564304984 2514734 + 2514714 2514754 41 GTGTCTTCCCTGGCACTGTGCTCGGGGACCCAGAGATGCCT GTGTCTTCCCTGGCACTGTGCTCAGGGACCCAGAGATGCCT < 41bp 0.71178853262674 0.489791131938585 0.21307278 0.09568906 prediction 0.423577065253481 Functional Loss - C16orf59 ENSG00000162062 UTR3 Human protein_coding chr16:2514734 chr16:2514737 . . 0 24 hm5C_associated_SNPs_88264 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2514700-2514738
64251 chr11 68455550 68455550 1 + G A UCEC 68455547 + 68455527 68455567 41 CCAGCAAGCGGGAGCTGCGGCCCGAAGATGACATGAAACCA CCAGCAAGCGGGAGCTGCGGCCCAAAGATGACATGAAACCA < 41bp 0.711787899880578 0.462878555702583 0.43047288 0.5263162 prediction 0.423575799761156 Functional Loss - GAL ENSG00000069482 CDS Human protein_coding chr11:68455547 chr11:68455550 nonsynonymous SNV 0.004 1 24 hm5C_associated_SNPs_88265 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:68455513-68455553
64251 chr12 57619107 57619107 1 + G T LUSC 57619105 + 57619085 57619125 41 TCGAGTTCGGAGGAGTCTGGCTGCCCGGGCCTGTCCCCCAC TCGAGTTCGGAGGAGTCTGGCTTCCCGGGCCTGTCCCCCAC < 41bp 0.711782648125443 0.435600351895703 0.15599358 0.10259178 prediction 0.423565296250886 Functional Loss - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619105 chr12:57619107 synonymous SNV . 0 23 hm5C_associated_SNPs_88266 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:57619087-57619134
64251 chr18 3451630 3451630 1 + G C rs539858187 3451626 + 3451606 3451646 41 CGGCCCGCTGCGGGGCGTTCCTGGGGGGTAGCCTCAAGGCC CGGCCCGCTGCGGGGCGTTCCTGGCGGGTAGCCTCAAGGCC < 41bp 0.877268345556499 0.665486362403786 0.94599086 0.40501967 prediction 0.423563966305425 Functional Loss - TGIF1 ENSG00000177426 UTR5 Human protein_coding chr18:3451626 chr18:3451630 . . 0 25 hm5C_associated_SNPs_88267 0 0 5 CSTF2T POSTAR2 ENCODE chr18:3451615-3451648
64251 chr22 31583119 31583119 1 + G C BLCA 31583115 + 31583095 31583135 41 GCCCTCGGCCTCTGCATCTCCTGAGAACTCCAGTGCAGGGG GCCCTCGGCCTCTGCATCTCCTGACAACTCCAGTGCAGGGG < 41bp 0.877385021029692 0.665611063435674 0.15653336 0.03199026 prediction 0.423547915188035 Functional Loss - RNF185 ENSG00000138942 CDS Human protein_coding chr22:31583115 chr22:31583119 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_88269 0 0 2 BUD13 POSTAR2 ENCODE chr22:31582971-31583122
64251 chr20 61445049 61445049 1 + G T LUAD 61445046 + 61445026 61445066 41 TGGTCCTCCTGTCCCTGCTGCAGGGGCTGGGGCCTCCGGAG TGGTCCTCCTGTCCCTGCTGCAGTGGCTGGGGCCTCCGGAG < 41bp 0.937561415534266 0.72578822073264 0.9239556 0.81023043 prediction 0.423546389603251 Functional Loss - OGFR ENSG00000060491 UTR3 Human protein_coding chr20:61445046 chr20:61445049 . . 0 24 hm5C_associated_SNPs_88272 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61445042-61445120
64251 chr4 184366082 184366082 1 + G T COAD 184366079 + 184366059 184366099 41 GATTTTTTGCTTCGCAACGCCGGGGACCTGGCCCCCGCTGG GATTTTTTGCTTCGCAACGCCGGTGACCTGGCCCCCGCTGG < 41bp 0.925442593548226 0.71367068277274 0.91520536 0.8993121 prediction 0.423543821550973 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184366079 chr4:184366082 synonymous SNV . 0 24 hm5C_associated_SNPs_88273 0 0 4 RBM15 POSTAR2 ENCODE chr4:184366063-184366129
64251 chr17 46926728 46926728 1 + C T SKCM 46926725 + 46926705 46926745 41 ACTCAGACATGCAGGCTGAGCTCCAAAAGAAGCAGGTATGG ACTCAGACATGCAGGCTGAGCTCTAAAAGAAGCAGGTATGG < 41bp 0.780173399494767 0.568402180774022 0.87729496 0.8641131 prediction 0.423542437441491 Functional Loss - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46926725 chr17:46926728 stopgain 0.869 0 24 hm5C_associated_SNPs_88274 0 0 2 UCHL5 POSTAR2 ENCODE chr17:46926650-46926736
64251 chr2 241818185 241818185 1 + G A ESCA 241818182 + 241818162 241818202 41 CCACCCGCGAGAATGTGGACCGCGTGACGGAGGCCCTGAGG CCACCCGCGAGAATGTGGACCGCATGACGGAGGCCCTGAGG < 41bp 0.711766454080069 0.46649032333109 0.31492138 0.274307 prediction 0.423532908160138 Functional Loss - AGXT ENSG00000172482 CDS Human protein_coding chr2:241818182 chr2:241818185 nonsynonymous SNV 0.020 4 24 hm5C_associated_SNPs_88278 0 0 3 DDX55 POSTAR2 ENCODE chr2:241818169-241818229
64251 chr2 241818184 241818184 1 + C T UCEC 241818182 + 241818162 241818202 41 CCACCCGCGAGAATGTGGACCGCGTGACGGAGGCCCTGAGG CCACCCGCGAGAATGTGGACCGTGTGACGGAGGCCCTGAGG < 41bp 0.711766454080069 0.472375136072098 0.31492138 0.30987462 prediction 0.423532908160138 Functional Loss - AGXT ENSG00000172482 CDS Human protein_coding chr2:241818182 chr2:241818184 synonymous SNV . 0 23 hm5C_associated_SNPs_88279 0 0 3 DDX55 POSTAR2 ENCODE chr2:241818169-241818229
64251 chr16 87678387 87678387 1 + G A LUSC 87678384 + 87678364 87678404 41 GACAAACGCTCCGGCTTCGGCGTGAGCCAGCGCTCGGACGG GACAAACGCTCCGGCTTCGGCGTAAGCCAGCGCTCGGACGG < 41bp 0.822349447491088 0.610590742921845 0.48549104 0.35697865 prediction 0.423517409138486 Functional Loss - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678384 chr16:87678387 synonymous SNV . 0 24 hm5C_associated_SNPs_88286 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr16:87678387-87678411
64251 chr3 44702109 44702109 1 + C T rs201317113 44702107 + 44702087 44702127 41 CTAGTCTCCATGGCCAAGCACTCAAGGATTGATGGACACCA CTAGTCTCCATGGCCAAGCACTTAAGGATTGATGGACACCA < 41bp 0.726627520011761 0.514875480141571 0.26923016 0.20100823 prediction 0.42350407974038 Functional Loss - ZNF35 ENSG00000236869 ncRNA_intronic Human antisense chr3:44702107 chr3:44702109 . . 0 23 hm5C_associated_SNPs_88292 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:44702075-44702112
64251 chr19 49376682 49376682 1 + T C UCEC 49376681 + 49376661 49376701 41 AGCTGGCCTGGAGGGAGAAGCTAGGACTCCTCTGGCAATCC AGCTGGCCTGGAGGGAGAAGCCAGGACTCCTCTGGCAATCC < 41bp 0.766496670683288 0.554746297076981 0.8437522 0.8836225 prediction 0.423500747212614 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376681 chr19:49376682 synonymous SNV . 0 22 hm5C_associated_SNPs_88294 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49376660-49376682
64251 chr16 779346 779346 1 + C T rs556522308 779344 + 779324 779364 41 CCCCGCCGACGTCCTGGAGGCGCTATGCAAGGAGCGGGCGC CCCCGCCGACGTCCTGGAGGCGTTATGCAAGGAGCGGGCGC < 41bp 0.76509113391334 0.553341231825464 0.34760684 0.39622098 prediction 0.423499804175752 Functional Loss - HAGHL ENSG00000103253 CDS Human protein_coding chr16:779344 chr16:779346 synonymous SNV . 0 23 hm5C_associated_SNPs_88295 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:779306-779350
64251 chr2 121010518 121010518 1 + G A rs113189263 121010515 + 121010495 121010535 41 CGGGGCGCGTTTAAGAGCTGCGGGCCGGGTGCGGACGGCGG CGGGGCGCGTTTAAGAGCTGCGGACCGGGTGCGGACGGCGG < 41bp 0.712970458633748 0.501221744140656 0.75459 0.46976292 prediction 0.423497428986183 Functional Loss - RALB ENSG00000144118 UTR5 Human protein_coding chr2:121010515 chr2:121010518 . . 0 24 hm5C_associated_SNPs_88297 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr2:121010507-121010547
64251 chr11 30358279 30358279 1 + G T HNSC 30358276 + 30358256 30358296 41 GCTGAATGCCGCTGTGACCGCAAGTGGCTGTATGAGCAAAT GCTGAATGCCGCTGTGACCGCAATTGGCTGTATGAGCAAAT < 41bp 0.711747221208024 0.333546504616508 0.44457617 0.15357438 prediction 0.423494442416048 Functional Loss - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30358276 chr11:30358279 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_88298 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:30358109-30358293
64251 chr2 191524447 191524447 1 + C T UCEC 191524445 + 191524425 191524465 41 CCAGCAGACCTGGGCTCCCCCGCGTCCCCAAAGGAGAGCAG CCAGCAGACCTGGGCTCCCCCGTGTCCCCAAAGGAGAGCAG < 41bp 0.84097716883624 0.629230360123851 0.20759165 0.07259372 prediction 0.423493617424778 Functional Loss - NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524445 chr2:191524447 nonsynonymous SNV 0.846 1 23 hm5C_associated_SNPs_88299 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:191524396-191524448
64251 chr10 89653818 89653818 1 + C T STAD 89653815 + 89653795 89653835 41 CATTATTGCTATGGGATTTCCTGCAGAAAGACTTGAAGGCG CATTATTGCTATGGGATTTCCTGTAGAAAGACTTGAAGGCG < 41bp 0.7117460702467 0.488366821874742 0.49496073 0.2656453 prediction 0.423492140493401 Functional Loss - PTEN ENSG00000171862 CDS Human protein_coding chr10:89653815 chr10:89653818 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_88301 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:89653788-89653818
64251 chr9 124064268 124064268 1 + G T PRAD 124064265 + 124064245 124064285 41 ACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGG ACAGCATGGTGGTGGAACACCCCTAGTTCCTCAAGGCAGGG < 41bp 0.711745270788236 0.334437782158409 0.23598725 0.06001693 prediction 0.423490541576472 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124064265 chr9:124064268 stopgain 0.998 1 24 hm5C_associated_SNPs_88304 0 0 5 DDX3X POSTAR2 ENCODE chr9:124064237-124064316
64251 chr12 131357591 131357591 1 + C T rs145207608 131357588 + 131357568 131357608 41 CATCCCCTAGTGTTCCACACCAACAGAGGACCTATTAAGTT CATCCCCTAGTGTTCCACACCAATAGAGGACCTATTAAGTT < 41bp 0.711743499164977 0.487632955444017 0.04598379 0.02439031 prediction 0.423486998329955 Functional Loss - RAN ENSG00000132341 CDS Human protein_coding chr12:131357588 chr12:131357591 synonymous SNV . 0 24 hm5C_associated_SNPs_88305 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:131357580-131357620
64251 chr1 52231533 52231533 1 + C T UCEC 52231530 + 52231510 52231550 41 ACCGAGTAGCAGTCTCACTTCTCCAAGCCACGTGAACTTGT ACCGAGTAGCAGTCTCACTTCTCTAAGCCACGTGAACTTGT < 41bp 0.794567169543528 0.582824078981058 0.9591659 0.9065572 prediction 0.423486181124942 Functional Loss - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52231530 chr1:52231533 stopgain 1.000 3 24 hm5C_associated_SNPs_88306 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:52231506-52231542
64251 chr17 46024107 46024107 1 + C T COAD 46024104 + 46024084 46024124 41 CCCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGG CCCCTTTGGGGCCCATGACCCACTGCGGGGAGGAAGACTGG < 41bp 0.751216338121396 0.539475262997012 0.25522354 0.2553414 prediction 0.423482150248768 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46024104 chr17:46024107 nonsynonymous SNV 0.906 0 24 hm5C_associated_SNPs_88307 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr17:46024088-46024116
64251 chr3 61734583 61734583 1 + C T SKCM 61734581 + 61734561 61734601 41 AAGGCTACGTTGGGGCCCTGCACGAGAATAGACACGGCAGC AAGGCTACGTTGGGGCCCTGCATGAGAATAGACACGGCAGC < 41bp 0.711740686679928 0.453426215211634 0.39077005 0.29232836 prediction 0.423481373359857 Functional Loss - PTPRG ENSG00000144724 CDS Human protein_coding chr3:61734581 chr3:61734583 synonymous SNV . 0 23 hm5C_associated_SNPs_88308 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:61734564-61734586
64251 chr1 110169909 110169909 1 + C T rs563198884 110169907 + 110169887 110169927 41 GCATGGTGCGGGGTGTGGTGCACGTCTACACCCGCAGGGAA GCATGGTGCGGGGTGTGGTGCATGTCTACACCCGCAGGGAA < 41bp 0.711739523938284 0.459704639600592 0.16050434 0.1651249 prediction 0.423479047876568 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110169907 chr1:110169909 synonymous SNV . 0 23 hm5C_associated_SNPs_88311 0 0 3 FMR1 POSTAR2 ENCODE chr1:110169862-110169933
64251 chr1 150484274 150484274 1 + C T LUAD 150484272 + 150484252 150484292 41 GGGAGTTCCAGCGCTGCTGCCGCCAGGGGAACAATCACACC GGGAGTTCCAGCGCTGCTGCCGTCAGGGGAACAATCACACC < 41bp 0.84486251621146 0.633124176768304 0.7882606 0.45130533 prediction 0.423476678886313 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484272 chr1:150484274 synonymous SNV . 0 23 hm5C_associated_SNPs_88312 0 0 3 GPKOW POSTAR2 ENCODE chr1:150484244-150484287
64251 chr13 114150008 114150008 1 + G A COAD 114150005 + 114149985 114150025 41 AGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCC AGCGTGTGATCAAACTGCACCGCAGGCGAGGGGTGGCTGCC < 41bp 0.816095278510654 0.604371825840403 0.19739261 0.12759846 prediction 0.423446905340501 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150005 chr13:114150008 nonsynonymous SNV 0.057 3 24 hm5C_associated_SNPs_88320 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114150006-114150036
64251 chr17 21731355 21731355 1 + C T UCEC 21731352 + 21731332 21731372 41 ACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTG ACATCCAGAAGGAGTCGACCCTGTACCTGGTCCTGCGTCTG < 41bp 0.717690489624764 0.505974307700353 0.39282835 0.26152045 prediction 0.423432363848823 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731352 chr17:21731355 synonymous SNV . 0 24 hm5C_associated_SNPs_88328 0 0 2 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr19 47823512 47823512 1 + G T SARC 47823508 + 47823488 47823528 41 TTGGCCTGGATCGCCTGTGCCGTGGCTTGGGGTTTAGCCCT TTGGCCTGGATCGCCTGTGCCGTGTCTTGGGGTTTAGCCCT < 41bp 0.734969028969348 0.523256227764158 0.8236144 0.2273305 prediction 0.42342560241038 Functional Loss - C5AR1 ENSG00000197405 CDS Human protein_coding chr19:47823508 chr19:47823512 nonsynonymous SNV 0.108 0 25 hm5C_associated_SNPs_88331 0 0 1 SND1 POSTAR2 ENCODE chr19:47823464-47823540
64251 chr5 163205 163205 1 + G C LIHC 163201 + 163181 163221 41 TGGGGGTGGTGCCTGGGAACCTGCGCAACCACTGTCCGGCC TGGGGGTGGTGCCTGGGAACCTGCCCAACCACTGTCCGGCC < 41bp 0.711712389861541 0.401266746904759 0.31711477 0.2340956 prediction 0.423424779723083 Functional Loss - PLEKHG4B ENSG00000153404 CDS Human protein_coding chr5:163201 chr5:163205 synonymous SNV . 0 25 hm5C_associated_SNPs_88332 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585672 chr5:163200-163220
64251 chr19 10578222 10578222 1 + C T UCEC 10578219 + 10578199 10578239 41 GCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGA GCCAAGAGGGCTTGCAGTGCCTGTGCAGGGACATTTGGGGA < 41bp 0.711710409334625 0.499667982923176 0.16910183 0.16217625 prediction 0.42342081866925 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10578219 chr19:10578222 synonymous SNV . 0 24 hm5C_associated_SNPs_88333 0 0 1 RBM15 POSTAR2 ENCODE chr19:10578215-10578259
64251 chr3 127379588 127379588 1 + G T LUSC 127379585 + 127379565 127379605 41 GGTGTGGAGGTGGAGAGCAGCATGGGGCCCAGCTTGCTGCT GGTGTGGAGGTGGAGAGCAGCATTGGGCCCAGCTTGCTGCT < 41bp 0.71171011830139 0.307178629247088 0.50434726 0.16350636 prediction 0.423420236602779 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379585 chr3:127379588 nonsynonymous SNV 0.070 1 24 hm5C_associated_SNPs_88334 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127379567-127379596
64251 chr2 242509547 242509547 1 + G A UCEC 242509544 + 242509524 242509564 41 ATCTCTCTCCCTGCAGGCATCACGTGGGGCAAGGTGGTGTC ATCTCTCTCCCTGCAGGCATCACATGGGGCAAGGTGGTGTC < 41bp 0.796963906410932 0.585260481519445 0.86748004 0.76564777 prediction 0.423406849782973 Functional Loss - BOK ENSG00000176720 CDS Human protein_coding chr2:242509544 chr2:242509547 synonymous SNV . 0 24 hm5C_associated_SNPs_88339 0 0 2 LIN28B POSTAR2 ENCODE chr2:242509546-242509613
64251 chr16 29675468 29675468 1 + C T COAD 29675465 + 29675445 29675485 41 TGGAACCATAACAACGAACTCTCCAGAAACCTCCAGTAGGA TGGAACCATAACAACGAACTCTCTAGAAACCTCCAGTAGGA < 41bp 0.748090674407333 0.536392887289772 0.9459857 0.5403995 prediction 0.423395574235121 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675465 chr16:29675468 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_88341 0 0 1 SND1 POSTAR2 ENCODE chr16:29675409-29675476
64251 chr6 146865035 146865035 1 + G C rs559828400 146865031 + 146865011 146865051 41 GCGGGCGGAGGAGCCGGGGACCCCGGCCTGGGGGCGGCCGC GCGGGCGGAGGAGCCGGGGACCCCCGCCTGGGGGCGGCCGC < 41bp 0.853454260411426 0.641760014226617 0.8609655 0.6524787 prediction 0.423388492369618 Functional Loss - RAB32 ENSG00000118508 CDS Human protein_coding chr6:146865031 chr6:146865035 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_88345 0 0 2 DDX3X POSTAR2 ENCODE chr6:146865018-146865083
64251 chr19 14674050 14674050 1 + G A UCEC 14674047 + 14674027 14674067 41 CACGCCACCATTGCGGAGATCAAGAACCTCTTCACTAAGAC CACGCCACCATTGCGGAGATCAAAAACCTCTTCACTAAGAC < 41bp 0.811100460670929 0.599411867601135 0.29212788 0.2727664 prediction 0.423377186139588 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14674047 chr19:14674050 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_88351 0 0 6 DDX3X POSTAR2 ENCODE chr19:14674014-14674051
64251 chr11 76507429 76507429 1 + C T UCEC 76507426 + 76507406 76507446 41 GCTTCCGTGAGCTACCGGGCCTGCAGGTCCTGGACCTGTCG GCTTCCGTGAGCTACCGGGCCTGTAGGTCCTGGACCTGTCG < 41bp 0.749311753888994 0.537623389943147 0.19942406 0.10768977 prediction 0.423376727891694 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507426 chr11:76507429 stopgain 0.866 1 24 hm5C_associated_SNPs_88352 0 0 1 SND1 POSTAR2 ENCODE chr11:76507388-76507442
64251 chr16 85667575 85667575 1 + G A SKCM 85667572 + 85667552 85667592 41 GGGATGCTTTCCACCGCGACCAGGACCACCGCCACCGTCAA GGGATGCTTTCCACCGCGACCAGAACCACCGCCACCGTCAA < 41bp 0.802594554387311 0.590907428019953 0.6725413 0.29542068 prediction 0.423374252734715 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85667572 chr16:85667575 synonymous SNV . 0 24 hm5C_associated_SNPs_88354 0 0 7 AUH POSTAR2 ENCODE chr16:85667575-85667703
64251 chr17 73780978 73780978 1 + G A COAD 73780975 + 73780955 73780995 41 CAAGACCATGTCGAAGGGCCCCGGGCCCGGCGGCTCCGCAG CAAGACCATGTCGAAGGGCCCCGAGCCCGGCGGCTCCGCAG < 41bp 0.796464547392848 0.584777810444432 0.84025025 0.3504631 prediction 0.423373473896833 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73780975 chr17:73780978 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_88355 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:73780960-73780980
64251 chr1 155581995 155581995 1 + T C UCEC 155581994 + 155581974 155582014 41 GCTTCCAGATCCTGTGTGACCTGCACGATGGCTTCTCTGGG GCTTCCAGATCCTGTGTGACCCGCACGATGGCTTCTCTGGG < 41bp 0.820983410253853 0.609301582837115 0.18750241 0.15115437 prediction 0.423363654833476 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155581994 chr1:155581995 nonsynonymous SNV 0.988 3 22 hm5C_associated_SNPs_88357 0 0 4 PRPF8 POSTAR2 ENCODE chr1:155581944-155581996
64251 chr2 191524447 191524447 1 + C T UCEC 191524444 + 191524424 191524464 41 CCCAGCAGACCTGGGCTCCCCCGCGTCCCCAAAGGAGAGCA CCCAGCAGACCTGGGCTCCCCCGTGTCCCCAAAGGAGAGCA < 41bp 0.733332278236156 0.521651417176004 0.17313147 0.09517565 prediction 0.423361722120304 Functional Loss - NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524444 chr2:191524447 nonsynonymous SNV 0.846 1 24 hm5C_associated_SNPs_88358 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:191524396-191524448
64251 chr12 71977894 71977894 1 + G A LUSC 71977891 + 71977871 71977911 41 CCATGGCCGCAGTTCCCCTGCTGGGTGGCAGCAAGTATGGC CCATGGCCGCAGTTCCCCTGCTGAGTGGCAGCAAGTATGGC < 41bp 0.711675793743277 0.458760267268402 0.107396156 0.11739883 prediction 0.423351587486554 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977891 chr12:71977894 nonsynonymous SNV 0.871 0 24 hm5C_associated_SNPs_88362 0 0 2 EIF3H POSTAR2 ENCODE chr12:71977849-71977923
64251 chr11 63670616 63670616 1 + G T LUSC 63670613 + 63670593 63670633 41 AGCCTCGGCCAGGCCTCCATCCAGAATGGCAAAGACAGGTG AGCCTCGGCCAGGCCTCCATCCATAATGGCAAAGACAGGTG < 41bp 0.711674638252013 0.313588005878429 0.46775815 0.30069423 prediction 0.423349276504026 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63670613 chr11:63670616 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_88364 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63670605-63670626
64251 chr17 55752348 55752348 1 + G A LGG 55752345 + 55752325 55752365 41 CCCGGCAGGCTCCAACCCGGCGCGGCCCGGAGGCTTCCCGG CCCGGCAGGCTCCAACCCGGCGCAGCCCGGAGGCTTCCCGG < 41bp 0.770287758952053 0.558613187165424 0.34604472 0.2629902 prediction 0.423349143573259 Functional Loss - MSI2 ENSG00000153944 CDS Human protein_coding chr17:55752345 chr17:55752348 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88365 0 0 4 DDX24 POSTAR2 ENCODE chr17:55752324-55752367
64251 chr22 19420122 19420122 1 + G A SKCM 19420119 + 19420099 19420139 41 AGTATCTCGCTAGCCCTGCGCCCGACTAGCGGGTGAGTGCG AGTATCTCGCTAGCCCTGCGCCCAACTAGCGGGTGAGTGCG < 41bp 0.711673575037307 0.4684452107027 0.0149745345 0.0050088167 prediction 0.423347150074614 Functional Loss - MRPL40 ENSG00000185608 CDS Human protein_coding chr22:19420119 chr22:19420122 synonymous SNV . 0 24 hm5C_associated_SNPs_88366 0 0 7 DDX3X POSTAR2 ENCODE chr22:19420099-19420133
64251 chr12 120741753 120741753 1 + C T SKCM 120741751 + 120741731 120741771 41 CCTGCACACTGGGCTTTGAGCACCTGGGAGAAACTCGGAAA CCTGCACACTGGGCTTTGAGCATCTGGGAGAAACTCGGAAA < 41bp 0.711667401387212 0.434925629584669 0.23567984 0.24134248 prediction 0.423334802774423 Functional Loss - SIRT4 ENSG00000089163 CDS Human protein_coding chr12:120741751 chr12:120741753 nonsynonymous SNV 0.983 0 23 hm5C_associated_SNPs_88371 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:120741751-120741772
64251 chr22 46704837 46704837 1 + G T GBM 46704833 + 46704813 46704853 41 AAGAAGCATCCCTGGGGCTGCGGAGAAGGTAAATGCCACAG AAGAAGCATCCCTGGGGCTGCGGATAAGGTAAATGCCACAG < 41bp 0.736382608520615 0.524715902995901 0.8198066 0.34211397 prediction 0.423333411049429 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704833 chr22:46704837 nonsynonymous SNV 0.668 3 25 hm5C_associated_SNPs_88372 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:46704807-46704837
64251 chr22 40805868 40805868 1 + G A rs115424569 40805865 + 40805845 40805885 41 TCCAGAGCCCTGGCCGGGGCCGCGGGATATCAATATCAGGC TCCAGAGCCCTGGCCGGGGCCGCAGGATATCAATATCAGGC < 41bp 0.788891416298291 0.577226129851861 0.57192355 0.40917534 prediction 0.42333057289286 Functional Loss - SGSM3 ENSG00000100359 UTR3 Human protein_coding chr22:40805865 chr22:40805868 . . 0 24 hm5C_associated_SNPs_88374 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:40805849-40805875
64251 chr2 159477619 159477619 1 + T C UCEC 159477618 + 159477598 159477638 41 ATTCACCAGAACAGACATCTCTCCATGAAAGTGAGGGTCTG ATTCACCAGAACAGACATCTCCCCATGAAAGTGAGGGTCTG < 41bp 0.711661240444883 0.435327072934936 0.9650193 0.07709542 prediction 0.423322480889766 Functional Loss - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159477618 chr2:159477619 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_88377 0 0 1 YBX3 POSTAR2 ENCODE chr2:159477509-159477624
64251 chr17 40173632 40173632 1 + G T SARC 40173629 + 40173609 40173649 41 GCAAGGTGGTCGTGTGTGGCCAGGCGTCTGTGGGCAAAACT GCAAGGTGGTCGTGTGTGGCCAGTCGTCTGTGGGCAAAACT < 41bp 0.711660619576299 0.308407043521537 0.7200321 0.06208086 prediction 0.423321239152598 Functional Loss - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40173629 chr17:40173632 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_88379 0 0 11 TARDBP POSTAR2 DRA001158,DRS012385 chr17:40173610-40173634
64251 chr4 77959053 77959053 1 + A C rs115625407 77959052 + 77959032 77959072 41 TTCTCTGCTTTGTGACTCACCAGCAGTAACACACACAATCC TTCTCTGCTTTGTGACTCACCCGCAGTAACACACACAATCC < 41bp 0.772472965836912 0.560814319352047 0.1789279 0.033073097 prediction 0.42331729296973 Functional Loss - SEPT11 ENSG00000138758 UTR3 Human protein_coding chr4:77959052 chr4:77959053 . . 0 22 hm5C_associated_SNPs_88381 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr4:77959002-77959089
64251 chr11 31531540 31531540 1 + T C UCEC 31531539 + 31531519 31531559 41 TATCAACCGGGCTCCCAGCCCTAGACCAGCTCTTAGGTCGG TATCAACCGGGCTCCCAGCCCCAGACCAGCTCTTAGGTCGG < 41bp 0.792007845352491 0.580351179324506 0.49486452 0.35070148 prediction 0.42331333205597 Functional Loss - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31531539 chr11:31531540 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_88382 0 0 1 PPIG POSTAR2 ENCODE chr11:31531487-31531549
64251 chrX 100667072 100667072 1 + T C GBM 100667071 + 100667051 100667091 41 TGAAGTGATGCGCTTCTTCTCTGATTGCAAGATCCAAAATG TGAAGTGATGCGCTTCTTCTCCGATTGCAAGATCCAAAATG < 41bp 0.744207754631052 0.532558618236142 0.08204213 0.40203348 prediction 0.423298272789819 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667071 chrX:100667072 synonymous SNV . 0 22 hm5C_associated_SNPs_88389 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:100667049-100667094
64251 chr4 71654634 71654634 1 + C T STAD 71654631 + 71654611 71654651 41 AGCAGGATGCCCTGGTATCTCTTCGGCAGCAGCTGGATGAC AGCAGGATGCCCTGGTATCTCTTTGGCAGCAGCTGGATGAC < 41bp 0.711643766022169 0.483071820241112 0.22068807 0.14220771 prediction 0.423287532044338 Functional Loss - RUFY3 ENSG00000018189 CDS Human protein_coding chr4:71654631 chr4:71654634 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_88393 0 0 9 CSTF2 POSTAR2 GSE40859,GSM1003588 chr4:71654618-71654639
64251 chr20 54970777 54970777 1 + G A UCEC 54970774 + 54970754 54970794 41 AGCTCCTGCATCTCATCAAACTCGGTAGATTGTGAACACAA AGCTCCTGCATCTCATCAAACTCAGTAGATTGTGAACACAA < 41bp 0.795307342804453 0.583667802730424 0.20443323 0.11973694 prediction 0.423279080148057 Functional Loss - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54970774 chr20:54970777 nonsynonymous SNV 0.916 3 24 hm5C_associated_SNPs_88394 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:54970752-54970777
64251 chr3 33419604 33419604 1 + G A UCEC 33419601 + 33419581 33419621 41 GTGGACTCTTCCAGAATTGCCACGAATTGGAGAAGATGGAT GTGGACTCTTCCAGAATTGCCACAAATTGGAGAAGATGGAT < 41bp 0.767283809089705 0.555645995199394 0.12062284 0.20211768 prediction 0.423275627780622 Functional Loss - FBXL2 ENSG00000153558 CDS Human protein_coding chr3:33419601 chr3:33419604 nonsynonymous SNV 0.789 1 24 hm5C_associated_SNPs_88396 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:33419604-33419625
64251 chr7 1131420 1131420 1 + C T COAD 1131418 + 1131398 1131438 41 CTGGAGATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA CTGGAGATGTACCCAGGCACCGTGCAGCCTGCGGCCCCCAA < 41bp 0.711633622258361 0.471819201645212 0.21651924 0.20417193 prediction 0.423267244516722 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131418 chr7:1131420 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_88399 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1131420-1131440
64251 chr7 1131421 1131421 1 + G A UCEC 1131418 + 1131398 1131438 41 CTGGAGATGTACCCAGGCACCGCGCAGCCTGCGGCCCCCAA CTGGAGATGTACCCAGGCACCGCACAGCCTGCGGCCCCCAA < 41bp 0.711633622258361 0.465540701684893 0.21651924 0.092760235 prediction 0.423267244516722 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131418 chr7:1131421 synonymous SNV . 0 24 hm5C_associated_SNPs_88400 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1131420-1131440
64251 chr18 13056463 13056463 1 + G T COAD 13056461 + 13056441 13056481 41 TGCCACAGTCTGTGGCTTCTCAGGAGGCCTTCCCTATCCAG TGCCACAGTCTGTGGCTTCTCATGAGGCCTTCCCTATCCAG < 41bp 0.906571630528034 0.694938961657404 0.93317664 0.46505463 prediction 0.423265337741261 Functional Loss - CEP192 ENSG00000101639 CDS Human protein_coding chr18:13056461 chr18:13056463 stopgain 0.076 0 23 hm5C_associated_SNPs_88401 0 0 2 RBM15 POSTAR2 ENCODE chr18:13056452-13056513
64251 chr3 119217596 119217596 1 + C T BLCA 119217594 + 119217574 119217614 41 GAAGGCCATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTC GAAGGCCATGGAGGTGCCGCCATCGGCACCGCGGAGCTTTC < 41bp 0.80608781714361 0.594459746911932 0.5452601 0.6942725 prediction 0.423256140463356 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119217594 chr3:119217596 nonsynonymous SNV 0.065 0 23 hm5C_associated_SNPs_88407 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:119217552-119217694
64251 chr16 57775612 57775612 1 + G A rs540920595 57775609 + 57775589 57775629 41 CCCTGTGTAGAAGAGATCGTCGCGCATGCCAGCAACGTGTC CCCTGTGTAGAAGAGATCGTCGCACATGCCAGCAACGTGTC < 41bp 0.711623128964633 0.462635321141595 0.1961542 0.13027665 prediction 0.423246257929266 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57775609 chr16:57775612 synonymous SNV . 0 24 hm5C_associated_SNPs_88409 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:57775607-57775645
64251 chr16 57775611 57775611 1 + C T UCEC 57775609 + 57775589 57775629 41 CCCTGTGTAGAAGAGATCGTCGCGCATGCCAGCAACGTGTC CCCTGTGTAGAAGAGATCGTCGTGCATGCCAGCAACGTGTC < 41bp 0.711623128964633 0.449281693305768 0.1961542 0.16544655 prediction 0.423246257929266 Functional Loss - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57775609 chr16:57775611 nonsynonymous SNV 0.959 4 23 hm5C_associated_SNPs_88410 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:57775607-57775645
64251 chr15 38765742 38765742 1 + G A UCEC 38765739 + 38765719 38765759 41 TCTCAAAGGTCCAGAAAAATCATGTGGGAAAACCACTGCTG TCTCAAAGGTCCAGAAAAATCATATGGGAAAACCACTGCTG < 41bp 0.711615100754837 0.481615040073019 0.50439864 0.24285486 prediction 0.423230201509674 Functional Loss - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38765739 chr15:38765742 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_88414 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:38765712-38765742
64251 chr5 179251239 179251239 1 + G T UCEC 179251237 + 179251217 179251257 41 ACACGGACACTTCGGGTGGCCAGGATGGGAAATGGGTCCAC ACACGGACACTTCGGGTGGCCATGATGGGAAATGGGTCCAC < 41bp 0.914978812782936 0.70336478066322 0.889444 0.69363177 prediction 0.423228064239432 Functional Loss - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179251237 chr5:179251239 stopgain 0.997 0 23 hm5C_associated_SNPs_88419 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:179251208-179251246
64251 chr19 4409625 4409625 1 + G A COAD 4409622 + 4409602 4409642 41 GTGAGGTGCTGGAATCTTTCCCCGAAGAAGACTCTGTACTC GTGAGGTGCTGGAATCTTTCCCCAAAGAAGACTCTGTACTC < 41bp 0.71161359051246 0.456814743211942 0.23313415 0.1405232 prediction 0.42322718102492 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409622 chr19:4409625 nonsynonymous SNV 0.415 3 24 hm5C_associated_SNPs_88420 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:4409571-4409657
64251 chr1 156106111 156106111 1 + G T PCPG 156106108 + 156106088 156106128 41 GCGTCACCAAAAAGCGCAAACTGGAGTCCACTGAGAGCCGC GCGTCACCAAAAAGCGCAAACTGTAGTCCACTGAGAGCCGC < 41bp 0.930413730214573 0.718801451530002 0.3009139 0.07706496 prediction 0.423224557369141 Functional Loss - LMNA ENSG00000160789 CDS Human protein_coding chr1:156106108 chr1:156106111 stopgain 0.904 0 24 hm5C_associated_SNPs_88424 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:156106102-156106140
64251 chr15 91328268 91328268 1 + G T SARC 91328265 + 91328245 91328285 41 TGCTGGCCTCAGTGATTCTGCCAGAGATGAAGTGCAGCAGA TGCTGGCCTCAGTGATTCTGCCATAGATGAAGTGCAGCAGA < 41bp 0.711607342677033 0.316601010618695 0.77858204 0.22274482 prediction 0.423214685354066 Functional Loss - BLM ENSG00000197299 CDS Human protein_coding chr15:91328265 chr15:91328268 nonsynonymous SNV 0.984 5 24 hm5C_associated_SNPs_88426 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91328236-91328269
64251 chr10 100004536 100004536 1 + G C rs112832441 100004532 + 100004512 100004552 41 CCGCTCCAGCTGCACTGCAGCCAGGGGGGATACCAGCTTCA CCGCTCCAGCTGCACTGCAGCCAGCGGGGATACCAGCTTCA < 41bp 0.711594707099725 0.445120468209866 0.8205867 0.1725057 prediction 0.423189414199451 Functional Loss - R3HCC1L ENSG00000166024 UTR3 Human protein_coding chr10:100004532 chr10:100004536 . . 0 25 hm5C_associated_SNPs_88434 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:100004514-100004536
64251 chr14 59113461 59113461 1 + C T GBM 59113459 + 59113439 59113479 41 GAGAATGTGGGGCTGTACCCCGCGCCTGTGCCTCTGCCCTA GAGAATGTGGGGCTGTACCCCGTGCCTGTGCCTCTGCCCTA < 41bp 0.808430405794788 0.596839033713318 0.83334935 0.6572746 prediction 0.423182744162941 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113459 chr14:59113461 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_88435 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:59113453-59113505
64251 chr3 31666476 31666476 1 + C T UCEC 31666474 + 31666454 31666494 41 GCAAAATACAGATGAACATGCACGAGTAATGTCTTGGTGGG GCAAAATACAGATGAACATGCATGAGTAATGTCTTGGTGGG < 41bp 0.866381288062158 0.65479144924087 0.33209777 0.36279854 prediction 0.423179677642576 Functional Loss - STT3B ENSG00000163527 CDS Human protein_coding chr3:31666474 chr3:31666476 stopgain 0.985 1 23 hm5C_associated_SNPs_88437 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:31666430-31666483
64251 chr4 48422361 48422361 1 + C T UCEC 48422358 + 48422338 48422378 41 CAGCGCTACTCTAACCAGACCTGCAGGGACAACTGCAATGA CAGCGCTACTCTAACCAGACCTGTAGGGACAACTGCAATGA < 41bp 0.711588182375705 0.477969328758185 0.13106894 0.111742884 prediction 0.423176364751409 Functional Loss - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48422358 chr4:48422361 nonsynonymous SNV 0.848 1 24 hm5C_associated_SNPs_88441 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr4:48422342-48422372
64251 chr8 23429334 23429334 1 + C T UCEC 23429332 + 23429312 23429352 41 GAGTTCTTCAAGTACTTTCTCACCAAGCGCCAGCTGGAAAA GAGTTCTTCAAGTACTTTCTCATCAAGCGCCAGCTGGAAAA < 41bp 0.711585868785151 0.434412968406686 0.12225029 0.11668688 prediction 0.423171737570303 Functional Loss - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429332 chr8:23429334 nonsynonymous SNV 0.942 0 23 hm5C_associated_SNPs_88443 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:23429298-23429334
64251 chr12 58002346 58002346 1 + G T UCEC 58002343 + 58002323 58002363 41 AGTTCGGTATCCTGGCACCACACGGGTGGCCTACCTCCCGG AGTTCGGTATCCTGGCACCACACTGGTGGCCTACCTCCCGG < 41bp 0.939108069229076 0.727526355519749 0.9099183 0.7962393 prediction 0.423163427418654 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002343 chr12:58002346 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_88448 0 0 1 PPIG POSTAR2 ENCODE chr12:58002340-58002401
64251 chr16 820249 820249 1 + G A rs9745376 820246 + 820226 820266 41 CGGGCCTTCTGAAGGTCTCCCACGTTGTGGCCCAGCAGCGC CGGGCCTTCTGAAGGTCTCCCACATTGTGGCCCAGCAGCGC < 41bp 0.795181746447501 0.583600965260031 0.03657368 0.057866007 prediction 0.423161562374941 Functional Loss - MIR662 ENSG00000162006 CDS Human protein_coding chr16:820246 chr16:820249 synonymous SNV . 0 24 hm5C_associated_SNPs_88450 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr16:820240-820260
64251 chr16 85839923 85839923 1 + G A rs148793654 85839920 + 85839900 85839940 41 GGGCATTGCCGGGTTGCTCGCTCGTGGTAATGACTCTTCCC GGGCATTGCCGGGTTGCTCGCTCATGGTAATGACTCTTCCC < 41bp 0.780967576781274 0.569386853294736 0.50328946 0.43219483 prediction 0.423161446973076 Functional Loss - COX4I1 ENSG00000131143 UTR3 Human protein_coding chr16:85839920 chr16:85839923 . . 0 24 hm5C_associated_SNPs_88451 0 0 8 TARDBP POSTAR2 DRA001158,DRS012385 chr16:85839888-85839928
64251 chr16 84691202 84691202 1 + C T rs112226135 84691199 + 84691179 84691219 41 CTGCTGCCCAAGGAGGCCAACTGCGAGGGCTTCATCGAGGA CTGCTGCCCAAGGAGGCCAACTGTGAGGGCTTCATCGAGGA < 41bp 0.715172290171925 0.503592699846891 0.66821283 0.49254876 prediction 0.423159180650066 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84691199 chr16:84691202 synonymous SNV . 0 24 hm5C_associated_SNPs_88452 0 0 1 METAP2 POSTAR2 ENCODE chr16:84691167-84691234
64251 chr1 202531968 202531968 1 + G A rs150829491 202531965 + 202531945 202531985 41 TTACGGTGACCGGGCTTCAGCAAGAGCCCGTCGGGAGGCCC TTACGGTGACCGGGCTTCAGCAAAAGCCCGTCGGGAGGCCC < 41bp 0.80855819884808 0.59697938637413 0.74742275 0.35741132 prediction 0.423157624947901 Functional Loss - PPP1R12B ENSG00000077157 CDS Human protein_coding chr1:202531965 chr1:202531968 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_88454 0 0 2 SF3B4 POSTAR2 ENCODE chr1:202531842-202531979
64251 chr12 6567916 6567916 1 + G A UCEC 6567913 + 6567893 6567933 41 GGATGTGGTGGTGACGTGGACCCGAGAGGAGCTGGGTGGAT GGATGTGGTGGTGACGTGGACCCAAGAGGAGCTGGGTGGAT < 41bp 0.818989597112934 0.607412725624078 0.60634285 0.48416927 prediction 0.423153742977711 Functional Loss - TAPBPL ENSG00000139192 CDS Human protein_coding chr12:6567913 chr12:6567916 nonsynonymous SNV 0.085 0 24 hm5C_associated_SNPs_88456 0 0 1 PPIG POSTAR2 ENCODE chr12:6567880-6567958
64251 chr1 154215707 154215707 1 + G A UCEC 154215704 + 154215684 154215724 41 GTTTTCCAGCTTTCTGAGACCAAGATCTTCACTGCCTCTAA GTTTTCCAGCTTTCTGAGACCAAAATCTTCACTGCCTCTAA < 41bp 0.782959255305521 0.571384113112791 0.15684557 0.10780442 prediction 0.42315028438546 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154215704 chr1:154215707 synonymous SNV . 0 24 hm5C_associated_SNPs_88458 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:154215696-154215712
64251 chr5 175740726 175740726 1 + G T ESCA 175740724 + 175740704 175740744 41 TGCCTGGGCGAGTCCTTTTCCTGCGTTATGTCGTTCAGACC TGCCTGGGCGAGTCCTTTTCCTTCGTTATGTCGTTCAGACC < 41bp 0.711571661179381 0.388812309065331 0.27778876 0.1344704 prediction 0.423143322358762 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175740724 chr5:175740726 synonymous SNV . 0 23 hm5C_associated_SNPs_88464 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:175740720-175740740
64251 chr2 73470219 73470219 1 + C T SKCM 73470216 + 73470196 73470236 41 ATGTGGAGGAAGGTTTACACCCCCAGATCATCATTCGAGCT ATGTGGAGGAAGGTTTACACCCCTAGATCATCATTCGAGCT < 41bp 0.762140748473626 0.550570566557122 0.05203998 0.052658975 prediction 0.423140363833007 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73470216 chr2:73470219 stopgain 0.998 1 24 hm5C_associated_SNPs_88465 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73470177-73470236
64251 chr1 46806527 46806527 1 + G T UCEC 46806525 + 46806505 46806545 41 GCGCTGACACTGAGGGGTGTCCGGGAGCTGCTGAAGCGTGT GCGCTGACACTGAGGGGTGTCCTGGAGCTGCTGAAGCGTGT < 41bp 0.711566407091899 0.360615018424981 0.9036988 0.36195356 prediction 0.423132814183798 Functional Loss - NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46806525 chr1:46806527 nonsynonymous SNV 0.791 1 23 hm5C_associated_SNPs_88469 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:46806510-46806544
64251 chr7 135330313 135330313 1 + G A BLCA 135330310 + 135330290 135330330 41 TCTCAAGATTCCTTATTTGCCTCGAGAACCTTGTTTAAAAG TCTCAAGATTCCTTATTTGCCTCAAGAACCTTGTTTAAAAG < 41bp 0.711565056066951 0.493782923379513 0.16833994 0.026159763 prediction 0.423130112133901 Functional Loss - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135330310 chr7:135330313 synonymous SNV . 0 24 hm5C_associated_SNPs_88471 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:135330272-135330313
64251 chr1 246810884 246810884 1 + C T COAD 246810881 + 246810861 246810901 41 CACAGGCTCAGAGGAAAGAACTCCGTTTGCCACTTCGGGAT CACAGGCTCAGAGGAAAGAACTCTGTTTGCCACTTCGGGAT < 41bp 0.711563251667262 0.478483714903628 0.31384185 0.15638557 prediction 0.423126503334523 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810881 chr1:246810884 nonsynonymous SNV 0.520 0 24 hm5C_associated_SNPs_88472 0 0 5 FXR2 POSTAR2 ENCODE chr1:246810880-246810918
64251 chr1 246810883 246810883 1 + C T SKCM 246810881 + 246810861 246810901 41 CACAGGCTCAGAGGAAAGAACTCCGTTTGCCACTTCGGGAT CACAGGCTCAGAGGAAAGAACTTCGTTTGCCACTTCGGGAT < 41bp 0.711563251667262 0.412696342973235 0.31384185 0.19255105 prediction 0.423126503334523 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810881 chr1:246810883 synonymous SNV . 0 23 hm5C_associated_SNPs_88473 0 0 5 FXR2 POSTAR2 ENCODE chr1:246810880-246810918
64251 chr17 16285542 16285542 1 + G A COAD 16285539 + 16285519 16285559 41 GAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCC GAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCC < 41bp 0.711562066184914 0.472019821335635 0.63650817 0.36911023 prediction 0.423124132369828 Functional Loss - UBB ENSG00000170315 CDS Human protein_coding chr17:16285539 chr17:16285542 synonymous SNV . 0 24 hm5C_associated_SNPs_88476 0 0 42 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:16285496-16285545
64251 chr19 9958878 9958878 1 + A C rs2010457 9958877 + 9958857 9958897 41 CCACCCTGAGGGGTAGAGGCCAGGAGGGTCTGGGCATTGGG CCACCCTGAGGGGTAGAGGCCCGGAGGGTCTGGGCATTGGG < 41bp 0.835177678598265 0.623617804379148 0.7032204 0.28615493 prediction 0.423119748438234 Functional Loss - PIN1 ENSG00000127445 UTR3 Human protein_coding chr19:9958877 chr19:9958878 . . 0 22 hm5C_associated_SNPs_88478 0 0 1 PRPF8 POSTAR2 ENCODE chr19:9958835-9958924
64251 chr5 1232420 1232420 1 + C T LUSC 1232417 + 1232397 1232437 41 AGCTCGCCATCGGCCAGCGGCTGCGGAAGGGCAGCGTCGGC AGCTCGCCATCGGCCAGCGGCTGTGGAAGGGCAGCGTCGGC < 41bp 0.715531281504654 0.503974450834819 0.7131234 0.39275485 prediction 0.42311366133967 Functional Loss - SLC6A18 ENSG00000164363 CDS Human protein_coding chr5:1232417 chr5:1232420 nonsynonymous SNV 0.058 4 24 hm5C_associated_SNPs_88480 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:1232420-1232440
64251 chr11 61503268 61503268 1 + G A UCEC 61503265 + 61503245 61503285 41 GCCTCCCCGTGGAGGGGCACCACGGCACCTGGCTGGGCCAC GCCTCCCCGTGGAGGGGCACCACAGCACCTGGCTGGGCCAC < 41bp 0.819686374106146 0.608132850176204 0.22743618 0.3145201 prediction 0.423107047859884 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503265 chr11:61503268 nonsynonymous SNV 0.795 3 24 hm5C_associated_SNPs_88482 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61503245-61503277
64251 chr21 45507700 45507700 1 + C T BLCA 45507697 + 45507677 45507717 41 ACTGGAAGTTCTCTCTTTACCTTCAGCCCCAGCACTCGGAG ACTGGAAGTTCTCTCTTTACCTTTAGCCCCAGCACTCGGAG < 41bp 0.711547575473449 0.482139726128198 0.07278752 0.11223388 prediction 0.423095150946899 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45507697 chr21:45507700 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_88487 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45507677-45507706
64251 chr19 52094290 52094290 1 + C T rs79020977 52094288 + 52094268 52094308 41 GGATCACTCTGGGTCCTCATCTCCAGCCACATGTTCACTCC GGATCACTCTGGGTCCTCATCTTCAGCCACATGTTCACTCC < 41bp 0.789511617232935 0.57796632809811 0.96264076 0.2254447 prediction 0.42309057826965 Functional Loss - LINC01530 ENSG00000167765 downstream Human other chr19:52094288 chr19:52094290 . . 0 23 hm5C_associated_SNPs_88491 0 0 1 HNRNPK POSTAR2 ENCODE chr19:52094224-52094374
64251 chr1 78309068 78309068 1 + G T LUSC 78309065 + 78309045 78309085 41 GACACCTTGAGCATCGCATCCACGGATTCCTTTGCTTCCGC GACACCTTGAGCATCGCATCCACTGATTCCTTTGCTTCCGC < 41bp 0.711538975734874 0.319625922795269 0.21987489 0.07023969 prediction 0.423077951469749 Functional Loss - MIGA1 ENSG00000180488 CDS Human protein_coding chr1:78309065 chr1:78309068 synonymous SNV . 0 24 hm5C_associated_SNPs_88499 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:78309060-78309072
64251 chr1 78309067 78309067 1 + C T UCEC 78309065 + 78309045 78309085 41 GACACCTTGAGCATCGCATCCACGGATTCCTTTGCTTCCGC GACACCTTGAGCATCGCATCCATGGATTCCTTTGCTTCCGC < 41bp 0.711538975734874 0.426730365859294 0.21987489 0.20487076 prediction 0.423077951469749 Functional Loss - MIGA1 ENSG00000180488 CDS Human protein_coding chr1:78309065 chr1:78309067 nonsynonymous SNV 0.020 2 23 hm5C_associated_SNPs_88500 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr1:78309060-78309072
64251 chr16 89632158 89632158 1 + G A rs558513941 89632155 + 89632135 89632175 41 GCTGGAACCAGCCCTCTGTGCCAGGCCGCAGACAGGTTCCG GCTGGAACCAGCCCTCTGTGCCAAGCCGCAGACAGGTTCCG < 41bp 0.711538291834613 0.487622856802624 0.29035586 0.15591115 prediction 0.423076583669225 Functional Loss - RPL13 ENSG00000167526;ENSG00000178773 intergenic Human other chr16:89632155 chr16:89632158 . . 0 24 hm5C_associated_SNPs_88502 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:89632139-89632158
64251 chr19 7676675 7676675 1 + G A GBM 7676672 + 7676652 7676692 41 GTGCTCCTCCGCTCTGTGAGCTCGGACAGCCTGGGCCCCCC GTGCTCCTCCGCTCTGTGAGCTCAGACAGCCTGGGCCCCCC < 41bp 0.805605429361071 0.594068634386781 0.49995628 0.36226505 prediction 0.42307358994858 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676672 chr19:7676675 synonymous SNV . 0 24 hm5C_associated_SNPs_88503 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:7676657-7676679
64251 chr2 74682700 74682700 1 + G A LUAD 74682697 + 74682677 74682717 41 AGCTCAAACTCAAAATCAAGCTTGGGGGACAAGTCCTGGGG AGCTCAAACTCAAAATCAAGCTTAGGGGACAAGTCCTGGGG < 41bp 0.711532535436252 0.468713955540097 0.09840119 0.046494424 prediction 0.423065070872503 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74682697 chr2:74682700 nonsynonymous SNV 0.947 4 24 hm5C_associated_SNPs_88506 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:74682682-74682704
64251 chr19 48953774 48953774 1 + C T LUAD 48953772 + 48953752 48953792 41 CTTTGCCCTTGACTGGTCCCCCCGGGTGACCGGTGAGTCCC CTTTGCCCTTGACTGGTCCCCCTGGGTGACCGGTGAGTCCC < 41bp 0.711525581278823 0.44443902308729 0.83006454 0.79642093 prediction 0.423051162557647 Functional Loss - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48953772 chr19:48953774 nonsynonymous SNV 0.409 1 23 hm5C_associated_SNPs_88510 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:48953721-48953776
64251 chr5 122181316 122181316 1 + G T rs369577100 122181314 + 122181294 122181334 41 CCCAACTCGCCCTCAGCCGGCTGGCCGGCGCGGCCATGGAG CCCAACTCGCCCTCAGCCGGCTTGCCGGCGCGGCCATGGAG < 41bp 0.711523739379743 0.448375268739743 0.21194407 0.16201067 prediction 0.423047478759487 Functional Loss - SNX24 ENSG00000064652 UTR5 Human protein_coding chr5:122181314 chr5:122181316 . . 0 23 hm5C_associated_SNPs_88511 0 0 1 DDX3X POSTAR2 ENCODE chr5:122181306-122181389
64251 chr10 72186122 72186122 1 + G A rs544201626 72186119 + 72186099 72186139 41 TCACTGCAGCCTCTGCTTCCCAGGTTCAAGTGTTTCTCCTG TCACTGCAGCCTCTGCTTCCCAGATTCAAGTGTTTCTCCTG < 41bp 0.76080062200332 0.549280002540087 0.7828872 0.6368909 prediction 0.423041238926466 Functional Loss - EIF4EBP2 ENSG00000148730 UTR3 Human protein_coding chr10:72186119 chr10:72186122 . . 0 24 hm5C_associated_SNPs_88514 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:72186094-72186131
64251 chr10 8051290 8051290 1 + C T CESC 8051287 + 8051267 8051307 41 GTGACTGAGACGGTCAGCACCTACGTGGTGCGTACCTGCCG GTGACTGAGACGGTCAGCACCTATGTGGTGCGTACCTGCCG < 41bp 0.714249369998871 0.502728915672223 0.111846626 0.044789314 prediction 0.423040908653296 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8051287 chr10:8051290 synonymous SNV . 0 24 hm5C_associated_SNPs_88515 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:8051281-8051311
64251 chr19 10790603 10790603 1 + G T LUAD 10790601 + 10790581 10790621 41 GGCGTCGGGCATCGTGATGCCAGGTTGGGGCCTTGTGCTTT GGCGTCGGGCATCGTGATGCCATGTTGGGGCCTTGTGCTTT < 41bp 0.711516690329623 0.363883172357979 0.8517057 0.28441864 prediction 0.423033380659246 Functional Loss - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10790601 chr19:10790603 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_88517 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10790578-10790603
64251 chr11 65388375 65388375 1 + C T THYM 65388372 + 65388352 65388392 41 CTACAGGCGGCCTGAACCTGCTGCAGCCGAGGCCTGTGGTT CTACAGGCGGCCTGAACCTGCTGTAGCCGAGGCCTGTGGTT < 41bp 0.714773718881437 0.503261819260029 0.366848 0.31948143 prediction 0.423023799242816 Functional Loss - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65388372 chr11:65388375 stopgain 0.997 0 24 hm5C_associated_SNPs_88521 0 0 3 DDX24 POSTAR2 ENCODE chr11:65388301-65388416
64251 chr17 17698048 17698048 1 + C T STAD 17698046 + 17698026 17698066 41 GGCGGGTGAGCGGGACTGTCCGCGGCTGCTGCTCAGCGCCC GGCGGGTGAGCGGGACTGTCCGTGGCTGCTGCTCAGCGCCC < 41bp 0.812392725308277 0.600885719620016 0.9157594 0.6086714 prediction 0.423014011376523 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17698046 chr17:17698048 nonsynonymous SNV 0.845 4 23 hm5C_associated_SNPs_88524 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17698020-17698059
64251 chrX 77301812 77301812 1 + G A BLCA 77301809 + 77301789 77301829 41 AGTTACAGGAAACCAACTTACGAGAGTTATGAACTGCCTGC AGTTACAGGAAACCAACTTACGAAAGTTATGAACTGCCTGC < 41bp 0.740939437486698 0.52943830572792 0.89378047 0.548149 prediction 0.423002263517555 Functional Loss - ATP7A ENSG00000165240 CDS Human protein_coding chrX:77301809 chrX:77301812 synonymous SNV . 0 24 hm5C_associated_SNPs_88530 0 0 1 UCHL5 POSTAR2 ENCODE chrX:77301794-77301851
64251 chr5 145838662 145838662 1 + G A LUAD 145838659 + 145838639 145838679 41 GCCCAGGCCCAGGCCCAGGCCCAGGCCCAGGCCCAAGCCCA GCCCAGGCCCAGGCCCAGGCCCAAGCCCAGGCCCAAGCCCA < 41bp 0.711497596793518 0.458862880132974 0.27082503 0.16998762 prediction 0.422995193587035 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838659 chr5:145838662 synonymous SNV . 0 24 hm5C_associated_SNPs_88534 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr11 73008491 73008491 1 + C T DLBC 73008488 + 73008468 73008508 41 ACTTCACCCAGAAGAAGTTCCGCCGGCGACCACATGAGCTC ACTTCACCCAGAAGAAGTTCCGCTGGCGACCACATGAGCTC < 41bp 0.712156712276526 0.500659828088219 0.14494091 0.12354332 prediction 0.422993768376613 Functional Loss - P2RY6 ENSG00000171631 CDS Human protein_coding chr11:73008488 chr11:73008491 nonsynonymous SNV 0.199 1 24 hm5C_associated_SNPs_88535 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:73008484-73008514
64251 chr5 110097170 110097170 1 + A T BLCA 110097168 + 110097148 110097188 41 GTATGTTGGATGCTTATTTTCCAGAACTTATTGCTAACTTT GTATGTTGGATGCTTATTTTCCTGAACTTATTGCTAACTTT < 41bp 0.71149343780898 0.495527615098991 0.41754368 0.23836225 prediction 0.42298687561796 Functional Loss - SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097168 chr5:110097170 synonymous SNV . 0 23 hm5C_associated_SNPs_88538 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr5 110097171 110097171 1 + G T UCEC 110097168 + 110097148 110097188 41 GTATGTTGGATGCTTATTTTCCAGAACTTATTGCTAACTTT GTATGTTGGATGCTTATTTTCCATAACTTATTGCTAACTTT < 41bp 0.71149343780898 0.327084192542695 0.41754368 0.19110939 prediction 0.42298687561796 Functional Loss - SLC25A46 ENSG00000164209 CDS Human protein_coding chr5:110097168 chr5:110097171 stopgain 1.000 1 24 hm5C_associated_SNPs_88539 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:110097121-110097174
64251 chr1 156849833 156849833 1 + G C COAD 156849832 + 156849812 156849852 41 CCCATTCGCTGGATGCCGCCCGAGAGCATCCTGTACCGTAA CCCATTCGCTGGATGCCGCCCCAGAGCATCCTGTACCGTAA < 41bp 0.895467110714568 0.683974857698798 0.65957296 0.4259295 prediction 0.422984506031541 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156849832 chr1:156849833 nonsynonymous SNV 0.984 5 22 hm5C_associated_SNPs_88541 0 0 4 BUD13 POSTAR2 ENCODE chr1:156849773-156849839
64251 chr9 100823237 100823237 1 + C T rs563649207 100823234 + 100823214 100823254 41 TACAGGGAGCTGCAGAGGTACGCCGAGGAGGTTGGGATCTT TACAGGGAGCTGCAGAGGTACGCTGAGGAGGTTGGGATCTT < 41bp 0.711490124593227 0.499940291817686 0.48263928 0.6315106 prediction 0.422980249186455 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100823234 chr9:100823237 synonymous SNV . 0 24 hm5C_associated_SNPs_88543 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:100823236-100823237
64251 chr2 73476217 73476217 1 + C T LUAD 73476214 + 73476194 73476234 41 AAAGTTGTCTTGTCCAAACTCCCCATTGGGGATGTGGCCAC AAAGTTGTCTTGTCCAAACTCCCTATTGGGGATGTGGCCAC < 41bp 0.802084542998341 0.590598997015421 0.15584326 0.107696235 prediction 0.42297109196584 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476214 chr2:73476217 synonymous SNV . 0 24 hm5C_associated_SNPs_88544 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476116-73476315
64251 chr3 179051266 179051266 1 + C T LUAD 179051264 + 179051244 179051284 41 AGACCAAACTGATGAAGAACCGCCAGCTAAACTTTGTAAAA AGACCAAACTGATGAAGAACCGTCAGCTAAACTTTGTAAAA < 41bp 0.859374312134337 0.647889749962363 0.06403336 0.04736632 prediction 0.422969124343948 Functional Loss - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179051264 chr3:179051266 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_88545 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:179051145-179051347
64251 chr16 30941527 30941527 1 + C T BLCA 30941525 + 30941505 30941545 41 CCTGACACCTCCTCTTCCTCCTCGGACTCAGACTCCGACTC CCTGACACCTCCTCTTCCTCCTTGGACTCAGACTCCGACTC < 41bp 0.711478155817306 0.42656330919423 0.17654335 0.10515016 prediction 0.422956311634613 Functional Loss - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941525 chr16:30941527 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_88547 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30941504-30941531
64251 chr14 93118169 93118169 1 + G T LUSC 93118167 + 93118147 93118187 41 GCCACCTCTTGGAAATTGCCCTGCACGCCCTTTGCCGCCCA GCCACCTCTTGGAAATTGCCCTTCACGCCCTTTGCCGCCCA < 41bp 0.711477036665807 0.358501472049203 0.11028433 0.15510586 prediction 0.422954073331614 Functional Loss - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93118167 chr14:93118169 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_88548 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:93118158-93118180
64251 chr5 177020677 177020677 1 + C T UCEC 177020674 + 177020654 177020694 41 ATCCTGGCCCGGCAGTATGGCTCCGAGGGCAGGTTCACTTT ATCCTGGCCCGGCAGTATGGCTCTGAGGGCAGGTTCACTTT < 41bp 0.755358665799656 0.54388461152314 0.31603545 0.22130975 prediction 0.422948108553032 Functional Loss - TMED9 ENSG00000184840 CDS Human protein_coding chr5:177020674 chr5:177020677 synonymous SNV . 0 24 hm5C_associated_SNPs_88552 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:177020648-177020703
64251 chr6 27101205 27101205 1 + A C STAD 27101204 + 27101184 27101224 41 ATTCAGGCCGTGCTACTGCCCAAAAAGACTGAGAGCCACCA ATTCAGGCCGTGCTACTGCCCCAAAAGACTGAGAGCCACCA < 41bp 0.711472624840402 0.460548442895991 0.04835108 0.04796508 prediction 0.422945249680804 Functional Loss - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101204 chr6:27101205 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_88558 0 0 35 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:27101120-27101260
64251 chr2 231249970 231249970 1 + G A HNSC 231249967 + 231249947 231249987 41 AAAGCCGATGGCCAGCTGGTCTCGAGTGAAAAGAAGGCGAA AAAGCCGATGGCCAGCTGGTCTCAAGTGAAAAGAAGGCGAA < 41bp 0.804680379651613 0.593208294956153 0.71221775 0.3728656 prediction 0.42294416939092 Functional Loss - SP140L ENSG00000185404 CDS Human protein_coding chr2:231249967 chr2:231249970 synonymous SNV . 0 24 hm5C_associated_SNPs_88560 0 0 4 UCHL5 POSTAR2 ENCODE chr2:231249939-231250010
64251 chr11 47296534 47296534 1 + C T SKCM 47296532 + 47296512 47296552 41 ACCAGTCTCCTCGGGGCAAACGCCGGGCCAAGGCGGGGAGC ACCAGTCTCCTCGGGGCAAACGTCGGGCCAAGGCGGGGAGC < 41bp 0.830576937820543 0.619107721937676 0.6421912 0.31739306 prediction 0.422938431765734 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47296532 chr11:47296534 synonymous SNV . 0 23 hm5C_associated_SNPs_88563 0 0 1 DDX24 POSTAR2 ENCODE chr11:47296484-47296536
64251 chr3 50255426 50255426 1 + G T LUSC 50255423 + 50255403 50255443 41 CTGCCCATCTATACTGAGCTCAAGGAGTAGGTGTCTGTGGC CTGCCCATCTATACTGAGCTCAATGAGTAGGTGTCTGTGGC < 41bp 0.711468294772178 0.323427039850954 0.90394497 0.28527266 prediction 0.422936589544357 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50255423 chr3:50255426 . 1.000 0 24 hm5C_associated_SNPs_88564 0 0 1 SND1 POSTAR2 ENCODE chr3:50255416-50255428
64251 chr15 22850952 22850952 1 + G A UCEC 22850949 + 22850929 22850969 41 AGTGGTGGACAAGTTGGCACCTCGATTGTCTCAGCTCAAGG AGTGGTGGACAAGTTGGCACCTCAATTGTCTCAGCTCAAGG < 41bp 0.785729371400568 0.574262757496249 0.8264415 0.65339446 prediction 0.422933227808638 Functional Loss - TUBGCP5 ENSG00000153575 CDS Human other chr15:22850949 chr15:22850952 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_88569 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:22850922-22850960
64251 chr17 40766301 40766301 1 + G A UCEC 40766298 + 40766278 40766318 41 GTGGCCAGCGTGAGGAAGACCACGGTCCTGGATGTCATGAG GTGGCCAGCGTGAGGAAGACCACAGTCCTGGATGTCATGAG < 41bp 0.806944692254896 0.595478339251654 0.8396869 0.44594494 prediction 0.422932706006484 Functional Loss - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40766298 chr17:40766301 synonymous SNV . 0 24 hm5C_associated_SNPs_88570 0 0 1 DGCR8 POSTAR2 ENCODE chr17:40766276-40766307
64251 chr11 75277621 75277621 1 + C T UCEC 75277619 + 75277599 75277639 41 GTGTCACCCGTGGTGGTGGCCTCGTCGCTAGGGCTCGTGTC GTGTCACCCGTGGTGGTGGCCTTGTCGCTAGGGCTCGTGTC < 41bp 0.711465922655822 0.429798711972073 0.1680224 0.22764048 prediction 0.422931845311643 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277619 chr11:75277621 nonsynonymous SNV 0.804 4 23 hm5C_associated_SNPs_88571 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:75277571-75277626
64251 chr12 56113310 56113310 1 + C T COAD 56113308 + 56113288 56113328 41 TGGGGATGTGGAGAACTGGGCTCGGAGCATCGAGCTGGACA TGGGGATGTGGAGAACTGGGCTTGGAGCATCGAGCTGGACA < 41bp 0.711463408517675 0.449369467452374 0.51462054 0.4621653 prediction 0.422926817035351 Functional Loss - BLOC1S1 ENSG00000135441 CDS Human protein_coding chr12:56113308 chr12:56113310 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_88574 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:56113267-56113318
64251 chr6 76623953 76623953 1 + C T PAAD 76623950 + 76623930 76623970 41 TTGATGGACCATGGATTGCCCGGCAAATGGAACTCCATCCT TTGATGGACCATGGATTGCCCGGTAAATGGAACTCCATCCT < 41bp 0.741872957164336 0.530411518062217 0.31748742 0.28961533 prediction 0.422922878204237 Functional Loss - MYO6 ENSG00000196586 CDS Human protein_coding chr6:76623950 chr6:76623953 stopgain 0.996 1 24 hm5C_associated_SNPs_88575 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:76623929-76623965
64251 chr1 33957193 33957193 1 + G T UCEC 33957190 + 33957170 33957210 41 GATGAGCAGGAGGAAGGGGGCTGGGATCCTGAAGAAATGGC GATGAGCAGGAGGAAGGGGGCTGTGATCCTGAAGAAATGGC < 41bp 0.711454732784019 0.312740956686296 0.437403 0.25607923 prediction 0.422909465568038 Functional Loss - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33957190 chr1:33957193 nonsynonymous SNV 0.974 4 24 hm5C_associated_SNPs_88578 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:33957167-33957200
64251 chr2 232577559 232577559 1 + T C CESC 232577558 + 232577538 232577578 41 CAGAAGACCGACGAGGATGACTAGACAGCAAAAAAGGAAAA CAGAAGACCGACGAGGATGACCAGACAGCAAAAAAGGAAAA < 41bp 0.711453145048101 0.465102354316715 0.15961435 0.33511373 prediction 0.422906290096202 Functional Loss - PTMA ENSG00000187514 CDS Human protein_coding chr2:232577558 chr2:232577559 stoploss 1.000 0 22 hm5C_associated_SNPs_88580 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:232577540-232577600
64251 chr7 37989995 37989995 1 + G A UCEC 37989992 + 37989972 37990012 41 AAGATGAGCGAAGACTGCTCCTGGTGAGCCTGTGCATAGGG AAGATGAGCGAAGACTGCTCCTGATGAGCCTGTGCATAGGG < 41bp 0.711448486768135 0.471662318144907 0.5602313 0.22113991 prediction 0.422896973536271 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37989992 chr7:37989995 stopgain 0.659 0 24 hm5C_associated_SNPs_88582 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:37989995-37989996
64251 chr7 98988663 98988663 1 + C T rs117071116 98988661 + 98988641 98988681 41 GTTTCTCAGCCAGCGGGAGCCGCGTGGCCTGGGTAAGCCAC GTTTCTCAGCCAGCGGGAGCCGTGTGGCCTGGGTAAGCCAC < 41bp 0.848163590846427 0.636716007502692 0.7416979 0.5076564 prediction 0.422895166687472 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98988661 chr7:98988663 synonymous SNV . 0 23 hm5C_associated_SNPs_88583 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98988641-98988666
64251 chr10 105143101 105143101 1 + C T BRCA 105143098 + 105143078 105143118 41 TATGGTCACAGTGGGCCTGTCTACGGAGCCAGCTTCAGTCC TATGGTCACAGTGGGCCTGTCTATGGAGCCAGCTTCAGTCC < 41bp 0.71144665807517 0.483947211324872 0.20390359 0.24133474 prediction 0.42289331615034 Functional Loss - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105143098 chr10:105143101 synonymous SNV . 0 24 hm5C_associated_SNPs_88584 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:105143082-105143102
64251 chr11 57563960 57563960 1 + G A READ 57563957 + 57563937 57563977 41 AGTAGTGAAGACTGTGACAACACGGACAGTACAGCCAGTCG AGTAGTGAAGACTGTGACAACACAGACAGTACAGCCAGTCG < 41bp 0.763279012975699 0.55183251524388 0.31415647 0.041562498 prediction 0.422892995463638 Functional Loss - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57563957 chr11:57563960 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_88585 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:57563953-57563985
64251 chr5 150827301 150827301 1 + G A rs56859579 150827298 + 150827278 150827318 41 CCGAGCAGTGAGTTCCTCCACTGGCTGCCGGCTGGCGGCGC CCGAGCAGTGAGTTCCTCCACTGACTGCCGGCTGGCGGCGC < 41bp 0.711587632444978 0.500143246794283 0.051247895 0.049824595 prediction 0.422888771301391 Functional Loss - SLC36A1 ENSG00000123643 UTR5 Human protein_coding chr5:150827298 chr5:150827301 . . 0 24 hm5C_associated_SNPs_88588 0 0 2 DDX3X POSTAR2 ENCODE chr5:150827227-150827320
64251 chr22 39428911 39428911 1 + G A rs546924629 39428908 + 39428888 39428928 41 GGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCA GGGATTACGGGCGTGAGCCACCCAGCTCGGCCGCACAACCA < 41bp 0.776725545364277 0.565284344634888 0.34162062 0.36151457 prediction 0.422882401458777 Functional Loss - APOBEC3D ENSG00000243811 UTR3 Human protein_coding chr22:39428908 chr22:39428911 . . 0 24 hm5C_associated_SNPs_88593 0 0 2 UPF1 POSTAR2 ENCODE chr22:39428882-39428925
64251 chr19 18054154 18054154 1 + G A OV 18054151 + 18054131 18054171 41 GGAGGAGGGCAGCGTGGAGGCGCGCACCATCGAGGACGCCA GGAGGAGGGCAGCGTGGAGGCGCACACCATCGAGGACGCCA < 41bp 0.796870114299094 0.58543418479052 0.29648495 0.13798475 prediction 0.422871859017149 Functional Loss - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18054151 chr19:18054154 nonsynonymous SNV 0.304 4 24 hm5C_associated_SNPs_88598 0 0 1 UCHL5 POSTAR2 ENCODE chr19:18054106-18054160
64251 chr2 120194538 120194538 1 + C T BLCA 120194536 + 120194516 120194556 41 TTCATCCGGACCCTCATCATCACGTGTGTGGCCCTGGCTGT TTCATCCGGACCCTCATCATCATGTGTGTGGCCCTGGCTGT < 41bp 0.819979248469466 0.608545620755218 0.8027564 0.84110415 prediction 0.422867255428496 Functional Loss - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194536 chr2:120194538 nonsynonymous SNV 0.435 0 23 hm5C_associated_SNPs_88599 0 0 5 DDX3X POSTAR2 ENCODE chr2:120194534-120194570
64251 chr7 21469180 21469180 1 + G C LUSC 21469179 + 21469159 21469199 41 AGTTCTTCCAGCAGTAATAACGGGAGTGCATCTCCTACAAA AGTTCTTCCAGCAGTAATAACCGGAGTGCATCTCCTACAAA < 41bp 0.823660864846443 0.612228942588875 0.9265294 0.9307345 prediction 0.422863844515136 Functional Loss - SP4 ENSG00000105866 CDS Human protein_coding chr7:21469179 chr7:21469180 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_88600 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:21469180-21469200
64251 chr16 2546477 2546477 1 + G A SKCM 2546474 + 2546454 2546494 41 CCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCCGTGCGC CCAGCTACTGCCTGAATGCACGCAGCGAGGGGGCCGTGCGC < 41bp 0.833285302161758 0.621861127048955 0.5886044 0.32931313 prediction 0.422848350225606 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546474 chr16:2546477 nonsynonymous SNV 0.014 3 24 hm5C_associated_SNPs_88604 2 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2546467-2546497
64251 chr2 44547563 44547563 1 - C T LUAD 44547566 - 44547546 44547586 41 TAACCTTATTCTCATTTTAGCGGGAAGGCCCGAAATCATAT TAACCTTATTCTCATTTTAGCGGAAAGGCCCGAAATCATAT < 41bp 0.785524402144383 0.574101441624843 0.6134898 0.26933283 prediction 0.422845921039081 Functional Loss - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44547566 chr2:44547563 nonsynonymous SNV 0.018 4 24 hm5C_associated_SNPs_88605 0 0 13 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:44547559-44547590
64251 chr19 39396066 39396066 1 + C T SKCM 39396064 + 39396044 39396084 41 CTCAGGGCCCTGACCGTACTCCCGACACCAACCATACCCCT CTCAGGGCCCTGACCGTACTCCTGACACCAACCATACCCCT < 41bp 0.843217127033883 0.631800246174467 0.11934081 0.076913595 prediction 0.422833761718833 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39396064 chr19:39396066 synonymous SNV . 0 23 hm5C_associated_SNPs_88607 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39396050-39396085
64251 chr20 37580765 37580765 1 + C T SKCM 37580763 + 37580743 37580783 41 GGATGAGAACATTCTCTTTCCTCGAGGAACTCAATCTACAG GGATGAGAACATTCTCTTTCCTTGAGGAACTCAATCTACAG < 41bp 0.711415812042041 0.443322436634777 0.7764612 0.07614857 prediction 0.422831624084081 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580763 chr20:37580765 stopgain 0.220 0 23 hm5C_associated_SNPs_88609 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:37580717-37580795
64251 chr20 37580764 37580764 1 + T C UCEC 37580763 + 37580743 37580783 41 GGATGAGAACATTCTCTTTCCTCGAGGAACTCAATCTACAG GGATGAGAACATTCTCTTTCCCCGAGGAACTCAATCTACAG < 41bp 0.711415812042041 0.475411034469436 0.7764612 0.38260263 prediction 0.422831624084081 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37580763 chr20:37580764 synonymous SNV . 0 22 hm5C_associated_SNPs_88610 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:37580717-37580795
64251 chr5 110428079 110428079 1 + A C rs371564253 110428078 + 110428058 110428098 41 GCTCTGGCAGAGGACTGTTCCACTAGACACGCTGAAGGGAC GCTCTGGCAGAGGACTGTTCCCCTAGACACGCTGAAGGGAC < 41bp 0.816748179703207 0.605332529372364 0.24269539 0.14902768 prediction 0.422831300661687 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110428078 chr5:110428079 synonymous SNV . 0 22 hm5C_associated_SNPs_88611 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:110428051-110428080
64251 chr12 104707059 104707059 1 + G A UCEC 104707056 + 104707036 104707076 41 ATGGCAAGAAGGTGATGGTCCTGGACTTTGTCACTCCCACC ATGGCAAGAAGGTGATGGTCCTGAACTTTGTCACTCCCACC < 41bp 0.79235995098572 0.580946276340876 0.5816146 0.35007685 prediction 0.422827349289689 Functional Loss - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104707056 chr12:104707059 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_88613 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr12:104707035-104707061
64251 chr19 45411811 45411811 1 + G A BLCA 45411808 + 45411788 45411828 41 AGGGCGCTGATGGACGAGACCATGAAGGAGTTGAAGGCCTA AGGGCGCTGATGGACGAGACCATAAAGGAGTTGAAGGCCTA < 41bp 0.711412001937802 0.474808235434176 0.31243262 0.30305642 prediction 0.422824003875603 Functional Loss - APOE ENSG00000130203 CDS Human protein_coding chr19:45411808 chr19:45411811 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_88614 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:45411788-45411817
64251 chr17 8170199 8170199 1 + G T OV 8170195 + 8170175 8170215 41 CTGGAGCTGGGCCACACAGGCGAGGCCGGGCCCCACGCCAT CTGGAGCTGGGCCACACAGGCGAGTCCGGGCCCCACGCCAT < 41bp 0.716281235944424 0.504871958319069 0.82843286 0.50785804 prediction 0.42281855525071 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170195 chr17:8170199 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_88615 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:8170157-8170208
64251 chr11 110007637 110007637 1 + G T LUSC 110007635 + 110007615 110007655 41 GAATGCAAGCTCTGGTGACTCTGAAGAAAACACAAATTCTG GAATGCAAGCTCTGGTGACTCTTAAGAAAACACAAATTCTG < 41bp 0.711409008481698 0.39360020026083 0.04130748 0.03606686 prediction 0.422818016963397 Functional Loss - ZC3H12C ENSG00000149289 CDS Human protein_coding chr11:110007635 chr11:110007637 stopgain 0.999 0 23 hm5C_associated_SNPs_88616 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:110007611-110007642
64251 chr22 46505786 46505786 1 + T C rs61195212 46505785 + 46505765 46505805 41 AGGATGACTCAAGATGCCACCTGGGTAAGTCTAGCCCAGAA AGGATGACTCAAGATGCCACCCGGGTAAGTCTAGCCCAGAA < 41bp 0.74046180506324 0.529054085198231 0.40361762 0.5542417 prediction 0.422815439730018 Functional Loss - MIRLET7BHG ENSG00000197182 CDS Human lincRNA chr22:46505785 chr22:46505786 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_88618 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr22:46505774-46505795
64251 chr18 21735932 21735932 1 + C T SKCM 21735929 + 21735909 21735949 41 GACTACTACCCCACCCTCATCACCACCTCCAACAGCTGTCT GACTACTACCCCACCCTCATCACTACCTCCAACAGCTGTCT < 41bp 0.752003466362375 0.540602339578119 0.009485543 0.011742353 prediction 0.422802253568512 Functional Loss - CABYR ENSG00000154040 CDS Human protein_coding chr18:21735929 chr18:21735932 nonsynonymous SNV 0.954 2 24 hm5C_associated_SNPs_88620 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:21735909-21735943
64251 chr1 222791476 222791476 1 + C T LUSC 222791474 + 222791454 222791494 41 TGGCTGCGGCGCCTGGGCTGCTCGTCTGGCTGCTCGTGCTC TGGCTGCGGCGCCTGGGCTGCTTGTCTGGCTGCTCGTGCTC < 41bp 0.711399888166624 0.470829824036555 0.30001432 0.22819269 prediction 0.422799776333249 Functional Loss - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222791474 chr1:222791476 synonymous SNV . 0 23 hm5C_associated_SNPs_88622 0 0 4 DDX3X POSTAR2 ENCODE chr1:222791472-222791530
64251 chr3 50112728 50112728 1 + G A UCEC 50112725 + 50112705 50112745 41 GCTGGAGGAAAGGGACAGGCCTGGGATATGGCCATCCTGGA GCTGGAGGAAAGGGACAGGCCTGAGATATGGCCATCCTGGA < 41bp 0.779762415192989 0.568366535178515 0.5624143 0.312257 prediction 0.422791760028949 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50112725 chr3:50112728 nonsynonymous SNV 0.990 5 24 hm5C_associated_SNPs_88627 0 0 14 FMR1 POSTAR2 GSE39682,GSM977616 chr3:50112718-50112741
64251 chr14 29237814 29237814 1 + G A STAD 29237811 + 29237791 29237831 41 GCCAGGGCCGCGTCCTCCTCCACGTCGCCGCAGGCCCCCTC GCCAGGGCCGCGTCCTCCTCCACATCGCCGCAGGCCCCCTC < 41bp 0.801526621051146 0.5901307823744 0.55882514 0.30829173 prediction 0.422791677353493 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237811 chr14:29237814 synonymous SNV . 0 24 hm5C_associated_SNPs_88628 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:29237791-29237820
64251 chr2 177016507 177016507 1 + C T COAD 177016505 + 177016485 177016525 41 CAGGGCGCAGACTTCCAGCCCCCGGGGCTCTACCCACGGCC CAGGGCGCAGACTTCCAGCCCCTGGGGCTCTACCCACGGCC < 41bp 0.711393558222745 0.473197862842676 0.7214593 0.8036655 prediction 0.422787116445491 Functional Loss - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016505 chr2:177016507 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_88629 0 0 1 DGCR8 POSTAR2 ENCODE chr2:177016486-177016520
64251 chrX 54837315 54837315 1 + C T LUAD 54837313 + 54837293 54837333 41 CAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTC CAGAGTCAGGCTTCTGGAACCATAGGTGGCCGAAGGGTCTC < 41bp 0.848101302615522 0.636708915124139 0.8243729 0.85790324 prediction 0.422784774982766 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837313 chrX:54837315 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_88630 0 0 10 YTHDF2 POSTAR2 GSE78030,GSM2064706 chrX:54837300-54837320
64251 chr2 170666827 170666827 1 + A C BLCA 170666823 + 170666803 170666843 41 AAGAAAAGATTGGATGCTTGCTGAAATTTTCGGGTGATTTA AAGAAAAGATTGGATGCTTGCTGACATTTTCGGGTGATTTA < 41bp 0.7113911212904 0.304463404010975 0.12045282 0.038626462 prediction 0.422782242580799 Functional Loss - SSB ENSG00000138385 CDS Human protein_coding chr2:170666823 chr2:170666827 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_88632 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr2:170666805-170666877
64251 chr7 155255078 155255078 1 + G A OV 155255075 + 155255055 155255095 41 TATCTACCCAGGTCCCAGGTCTCGAAAACCAAAGAAGAAGA TATCTACCCAGGTCCCAGGTCTCAAAAACCAAAGAAGAAGA < 41bp 0.711389957956941 0.486083580727853 0.7044723 0.43939787 prediction 0.422779915913881 Functional Loss - EN2 ENSG00000164778 CDS Human protein_coding chr7:155255075 chr7:155255078 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_88634 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:155255070-155255092
64251 chr7 155255077 155255077 1 + C T SKCM 155255075 + 155255055 155255095 41 TATCTACCCAGGTCCCAGGTCTCGAAAACCAAAGAAGAAGA TATCTACCCAGGTCCCAGGTCTTGAAAACCAAAGAAGAAGA < 41bp 0.711389957956941 0.415869411621054 0.7044723 0.23870116 prediction 0.422779915913881 Functional Loss - EN2 ENSG00000164778 CDS Human protein_coding chr7:155255075 chr7:155255077 stopgain 0.995 1 23 hm5C_associated_SNPs_88635 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:155255070-155255092
64251 chr16 67574511 67574511 1 + G A UCEC 67574508 + 67574488 67574528 41 ATGAAATATGGGCGTCAGCGCTGGAAACTACGGGGCCGAAT ATGAAATATGGGCGTCAGCGCTGAAAACTACGGGGCCGAAT < 41bp 0.813639902067856 0.602253061670321 0.8948326 0.50575364 prediction 0.422773680795069 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67574508 chr16:67574511 stopgain 1.000 1 24 hm5C_associated_SNPs_88638 0 0 3 PPIG POSTAR2 ENCODE chr16:67574476-67574529
64251 chr15 65945080 65945080 1 + G A UCEC 65945077 + 65945057 65945097 41 CATCACCAGTGTGATTGTCGCTCGAAAAGGCCTGGGAGACA CATCACCAGTGTGATTGTCGCTCAAAAAGGCCTGGGAGACA < 41bp 0.780369136599672 0.568984673722521 0.21869403 0.10085404 prediction 0.422768925754301 Functional Loss - SLC24A1 ENSG00000074621 CDS Human protein_coding chr15:65945077 chr15:65945080 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_88639 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:65945058-65945080
64251 chr21 34635344 34635344 1 + G A LUAD 34635341 + 34635321 34635361 41 CAGAATCCCAGTTGATAGACCCGGAGTCCGAGGAGGAGCCT CAGAATCCCAGTTGATAGACCCGAAGTCCGAGGAGGAGCCT < 41bp 0.711383193240704 0.471732539260054 0.80018806 0.11961228 prediction 0.422766386481408 Functional Loss - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635341 chr21:34635344 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_88640 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:34635329-34635348
64251 chr7 155571947 155571947 1 + C T rs150079635 155571945 + 155571925 155571965 41 GGGGGGTGGGCGAGAGAAAGCTCGAAAGGTATTATTGGTTT GGGGGGTGGGCGAGAGAAAGCTTGAAAGGTATTATTGGTTT < 41bp 0.711371271350073 0.493546118216745 0.24159843 0.2616424 prediction 0.422742542700145 Functional Loss - RBM33 ENSG00000184863 UTR3 Human protein_coding chr7:155571945 chr7:155571947 . . 0 23 hm5C_associated_SNPs_88646 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:155571939-155571960
64251 chr19 12014459 12014459 1 + G A HNSC 12014456 + 12014436 12014476 41 TGGGCTTTGCTGGATATTTCCCAGAGGAAACTCTACAAGGA TGGGCTTTGCTGGATATTTCCCAAAGGAAACTCTACAAGGA < 41bp 0.789222674203598 0.577856101200886 0.797257 0.28908283 prediction 0.422733146005424 Functional Loss - ZNF69 ENSG00000198429 CDS Human protein_coding chr19:12014456 chr19:12014459 synonymous SNV . 0 24 hm5C_associated_SNPs_88649 0 0 1 CDC40 POSTAR2 ENCODE chr19:12014458-12014541
64251 chr7 128492994 128492994 1 + G A LUAD 128492991 + 128492971 128493011 41 CTGGTGGGGCCATCTGAGATCGGGGACGCCAGCAAGGTGCG CTGGTGGGGCCATCTGAGATCGGAGACGCCAGCAAGGTGCG < 41bp 0.711364030311955 0.46409606741434 0.92282 0.902678 prediction 0.422728060623909 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128492991 chr7:128492994 synonymous SNV . 0 24 hm5C_associated_SNPs_88650 0 0 1 RPS3 POSTAR2 ENCODE chr7:128492993-128493038
64251 chr7 158663943 158663943 1 + C T SKCM 158663941 + 158663921 158663961 41 AGGAGCCGAGGTGCAGGGATCCCGACCAGGATGCCAGGAGC AGGAGCCGAGGTGCAGGGATCCTGACCAGGATGCCAGGAGC < 41bp 0.711362556436226 0.452091584871314 0.4270351 0.24307254 prediction 0.422725112872452 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158663941 chr7:158663943 synonymous SNV . 0 23 hm5C_associated_SNPs_88651 0 0 11 AGGF1 POSTAR2 ENCODE chr7:158663826-158663949
64251 chr7 158663944 158663944 1 + G A UCEC 158663941 + 158663921 158663961 41 AGGAGCCGAGGTGCAGGGATCCCGACCAGGATGCCAGGAGC AGGAGCCGAGGTGCAGGGATCCCAACCAGGATGCCAGGAGC < 41bp 0.711362556436226 0.464826886668371 0.4270351 0.16632006 prediction 0.422725112872452 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158663941 chr7:158663944 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_88652 0 0 11 AGGF1 POSTAR2 ENCODE chr7:158663826-158663949
64251 chr11 2424091 2424091 1 + G A STAD 2424088 + 2424068 2424108 41 CCGTCAGGCCTCCTCCCAGCCACGGTGCAGCCATTCCATCT CCGTCAGGCCTCCTCCCAGCCACAGTGCAGCCATTCCATCT < 41bp 0.809305215650425 0.597942790051227 0.068107456 0.094500095 prediction 0.422724851198397 Functional Loss - TSSC4 ENSG00000184281 CDS Human protein_coding chr11:2424088 chr11:2424091 synonymous SNV . 0 24 hm5C_associated_SNPs_88653 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:2424086-2424118
64251 chr3 10106450 10106450 1 + G A SKCM 10106447 + 10106427 10106467 41 CTGTGAAAGCACTGTACGGACTGGAAGAATACGACACTCAG CTGTGAAAGCACTGTACGGACTGAAAGAATACGACACTCAG < 41bp 0.773031249408673 0.561670260688183 0.15920347 0.09067646 prediction 0.422721977440979 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10106447 chr3:10106450 nonsynonymous SNV 0.599 3 24 hm5C_associated_SNPs_88655 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:10106440-10106460
64251 chr11 703087 703087 1 + C T CESC 703085 + 703065 703105 41 ACTGGGCCCTCAGCGCCACGCTCCTGGCCCTTCACGGCCTG ACTGGGCCCTCAGCGCCACGCTTCTGGCCCTTCACGGCCTG < 41bp 0.711358500732717 0.443977558749016 0.14608788 0.12106189 prediction 0.422717001465434 Functional Loss - TMEM80 ENSG00000177042 CDS Human protein_coding chr11:703085 chr11:703087 synonymous SNV . 0 23 hm5C_associated_SNPs_88658 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:703052-703087
64251 chr20 57767490 57767490 1 + C T SKCM 57767487 + 57767467 57767507 41 AGGGCCCCGGGCCCCGTGCGCTCCACCTGGACGCCCCCAGA AGGGCCCCGGGCCCCGTGCGCTCTACCTGGACGCCCCCAGA < 41bp 0.713300281586705 0.501942042493412 0.20665568 0.2926215 prediction 0.422716478186586 Functional Loss - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767487 chr20:57767490 synonymous SNV . 0 24 hm5C_associated_SNPs_88662 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:57767486-57767536
64251 chr2 36583490 36583490 1 + T C rs541170395 36583489 + 36583469 36583509 41 GGCTGCGGGCACCTCCTGGTCTCGCTGCTGGGGCTGCTGCT GGCTGCGGGCACCTCCTGGTCCCGCTGCTGGGGCTGCTGCT < 41bp 0.738495882605862 0.527146223241155 0.09222397 0.06966245 prediction 0.422699318729414 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36583489 chr2:36583490 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_88667 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:36583490-36583491
64251 chr20 44640876 44640876 1 + C T BLCA 44640874 + 44640854 44640894 41 CGACCTGTACCAGCGAGGGCCGCGGAGATGGGCGCCTCTGG CGACCTGTACCAGCGAGGGCCGTGGAGATGGGCGCCTCTGG < 41bp 0.711348856735044 0.439878626080805 0.6333946 0.50209 prediction 0.422697713470088 Functional Loss - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44640874 chr20:44640876 synonymous SNV . 0 23 hm5C_associated_SNPs_88668 0 0 2 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr20:44640860-44640880
64251 chr20 44640877 44640877 1 + G A COAD 44640874 + 44640854 44640894 41 CGACCTGTACCAGCGAGGGCCGCGGAGATGGGCGCCTCTGG CGACCTGTACCAGCGAGGGCCGCAGAGATGGGCGCCTCTGG < 41bp 0.711348856735044 0.456547259648609 0.6333946 0.51399654 prediction 0.422697713470088 Functional Loss - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44640874 chr20:44640877 nonsynonymous SNV 0.049 0 24 hm5C_associated_SNPs_88669 0 0 2 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr20:44640860-44640880
64251 chr1 110141559 110141559 1 + C T UCEC 110141557 + 110141537 110141577 41 AGTGGGAGGTAAGAGCTCTTCACCCTTCACCACCTTCTCCA AGTGGGAGGTAAGAGCTCTTCATCCTTCACCACCTTCTCCA < 41bp 0.714834803117332 0.503487077664199 0.06023538 0.08308065 prediction 0.422695450906266 Functional Loss - MIR197 ENSG00000207709 ncRNA_exonic Human other chr1:110141557 chr1:110141559 . . 0 23 hm5C_associated_SNPs_88670 0 0 5 DGCR8 POSTAR2 ENCODE chr1:110141518-110141585
64251 chr7 64168913 64168913 1 + G T LIHC 64168910 + 64168890 64168930 41 TATACATAAGATAATTCATACTGGAGAGAAACCCTACAAAT TATACATAAGATAATTCATACTGTAGAGAAACCCTACAAAT < 41bp 0.711340723094357 0.359975608658975 0.23693684 0.031436235 prediction 0.422681446188714 Functional Loss - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64168910 chr7:64168913 nonsynonymous SNV 0.490 3 24 hm5C_associated_SNPs_88676 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:64168906-64168942
64251 chr1 6640717 6640717 1 + C T BLCA 6640715 + 6640695 6640735 41 GTGTGAGGGTTCTGCAGGAGCTCAACAAGCAGCGGGAGAAG GTGTGAGGGTTCTGCAGGAGCTTAACAAGCAGCGGGAGAAG < 41bp 0.711340106522664 0.456785061812116 0.25537857 0.37602592 prediction 0.422680213045327 Functional Loss - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6640715 chr1:6640717 synonymous SNV . 0 23 hm5C_associated_SNPs_88677 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:6640688-6640732
64251 chrX 54954175 54954175 1 + C T LUSC 54954173 + 54954153 54954193 41 TCTGGGGCTTGCGCTCCTACCACGAGACTAGCAAGATGAAA TCTGGGGCTTGCGCTCCTACCATGAGACTAGCAAGATGAAA < 41bp 0.856139778093372 0.644809878363941 0.46664855 0.42773858 prediction 0.422659799458862 Functional Loss - TRO ENSG00000067445 CDS Human protein_coding chrX:54954173 chrX:54954175 synonymous SNV . 0 23 hm5C_associated_SNPs_88683 0 0 4 GRWD1 POSTAR2 ENCODE chrX:54954114-54954217
64251 chr10 94410215 94410215 1 + G A SKCM 94410212 + 94410192 94410232 41 ATACTGAAGAACCTCTAAGTCAAGAGCCATCTGTAGATGCT ATACTGAAGAACCTCTAAGTCAAAAGCCATCTGTAGATGCT < 41bp 0.778419914955459 0.567095336542856 0.38427883 0.17723703 prediction 0.422649156825206 Functional Loss - KIF11 ENSG00000138160 CDS Human protein_coding chr10:94410212 chr10:94410215 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_88687 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94410192-94410228
64251 chrX 107084157 107084157 1 + C T UCEC 107084154 + 107084134 107084174 41 GGTATGTTATCTCGCTGAACCACCGGGGCCTGGATGGCCTC GGTATGTTATCTCGCTGAACCACTGGGGCCTGGATGGCCTC < 41bp 0.71131912712292 0.488227038789489 0.2849224 0.20838055 prediction 0.42263825424584 Functional Loss - MID2 ENSG00000080561 CDS Human protein_coding chrX:107084154 chrX:107084157 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88689 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:107084140-107084160
64251 chr6 37252206 37252206 1 + G A COAD 37252203 + 37252183 37252223 41 CATTGAACAGTATTATGACTCTCGAAACGAGGAACATCACC CATTGAACAGTATTATGACTCTCAAAACGAGGAACATCACC < 41bp 0.771430132589583 0.560111555721843 0.92222226 0.41353077 prediction 0.42263715373548 Functional Loss - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37252203 chr6:37252206 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_88690 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:37252190-37252226
64251 chr11 67161231 67161231 1 + C T rs144155838 67161229 + 67161209 67161249 41 CAGGCCGTCTTCGACCCAGCCTCGTGCCCCCACATGCTCCG CAGGCCGTCTTCGACCCAGCCTTGTGCCCCCACATGCTCCG < 41bp 0.711316684600435 0.430715260138893 0.081042886 0.07282594 prediction 0.42263336920087 Functional Loss - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67161229 chr11:67161231 nonsynonymous SNV 0.458 0 23 hm5C_associated_SNPs_88694 0 0 3 BUD13 POSTAR2 ENCODE chr11:67161192-67161259
64251 chr11 67161232 67161232 1 + G A BLCA 67161229 + 67161209 67161249 41 CAGGCCGTCTTCGACCCAGCCTCGTGCCCCCACATGCTCCG CAGGCCGTCTTCGACCCAGCCTCATGCCCCCACATGCTCCG < 41bp 0.711316684600435 0.457999717490673 0.081042886 0.035803556 prediction 0.42263336920087 Functional Loss - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67161229 chr11:67161232 synonymous SNV . 0 24 hm5C_associated_SNPs_88695 0 0 3 BUD13 POSTAR2 ENCODE chr11:67161192-67161259
64251 chr19 1080343 1080343 1 + G T UCEC 1080341 + 1080321 1080361 41 GGGAGCCCCCCAGAAGAAGGCGGGTGCACTGAGGGCACACC GGGAGCCCCCCAGAAGAAGGCGTGTGCACTGAGGGCACACC < 41bp 0.711315745169852 0.343308963851378 0.89436734 0.35759875 prediction 0.422631490339703 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1080341 chr19:1080343 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_88696 0 0 1 DDX24 POSTAR2 ENCODE chr19:1080278-1080378
64251 chr4 20530693 20530693 1 + G A rs74787220 20530690 + 20530670 20530710 41 AATCAAAAGCTCAACAAAATCCCGGAGCACATTCCCCAGTA AATCAAAAGCTCAACAAAATCCCAGAGCACATTCCCCAGTA < 41bp 0.711314232122914 0.477099609421847 0.30711216 0.14227206 prediction 0.422628464245829 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20530690 chr4:20530693 synonymous SNV . 0 24 hm5C_associated_SNPs_88698 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:20530678-20530708
64251 chr4 20530692 20530692 1 + C T COAD 20530690 + 20530670 20530710 41 AATCAAAAGCTCAACAAAATCCCGGAGCACATTCCCCAGTA AATCAAAAGCTCAACAAAATCCTGGAGCACATTCCCCAGTA < 41bp 0.711314232122914 0.438984726993 0.30711216 0.26209503 prediction 0.422628464245829 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20530690 chr4:20530692 nonsynonymous SNV 0.662 4 23 hm5C_associated_SNPs_88699 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:20530678-20530708
64251 chr4 20530694 20530694 1 + G C LUAD 20530690 + 20530670 20530710 41 AATCAAAAGCTCAACAAAATCCCGGAGCACATTCCCCAGTA AATCAAAAGCTCAACAAAATCCCGCAGCACATTCCCCAGTA < 41bp 0.711314232122914 0.418678923748194 0.30711216 0.10623407 prediction 0.422628464245829 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20530690 chr4:20530694 nonsynonymous SNV 0.530 2 25 hm5C_associated_SNPs_88700 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:20530678-20530708
64251 chr5 71493137 71493137 1 + G A rs148344575 71493134 + 71493114 71493154 41 CTAGTCCTGAGGACAAGACTCTGGAAGTGGTGTCACCATCT CTAGTCCTGAGGACAAGACTCTGAAAGTGGTGTCACCATCT < 41bp 0.711314122415352 0.470633210807503 0.34410518 0.15773466 prediction 0.422628244830704 Functional Loss - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71493134 chr5:71493137 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_88701 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:71493090-71493146
64251 chr19 18499553 18499553 1 + G C BLCA 18499552 + 18499532 18499572 41 CATGTGCATCGGCGCGTGCCCGAGCCAGTTCCGGGCGGCAA CATGTGCATCGGCGCGTGCCCCAGCCAGTTCCGGGCGGCAA < 41bp 0.711313798754889 0.386856887569165 0.73210555 0.36362708 prediction 0.422627597509779 Functional Loss - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499552 chr19:18499553 synonymous SNV . 0 22 hm5C_associated_SNPs_88702 0 0 11 FMR1 POSTAR2 ENCODE chr19:18499528-18499571
64251 chr19 581467 581467 1 + G A UCEC 581464 + 581444 581484 41 GGCTCCGACCAGGCCATCATCACGCTCCGCGTGCGCAGCCA GGCTCCGACCAGGCCATCATCACACTCCGCGTGCGCAGCCA < 41bp 0.820244152572361 0.60893152333156 0.35793465 0.20396325 prediction 0.422625258481601 Functional Loss - BSG ENSG00000172270 CDS Human protein_coding chr19:581464 chr19:581467 synonymous SNV . 0 24 hm5C_associated_SNPs_88706 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:581412-581474
64251 chr6 26460041 26460041 1 + C T COAD 26460038 + 26460018 26460058 41 GGTCCTACGATGAGGCCATCCTGCACCTCGTAGTGGCAGGT GGTCCTACGATGAGGCCATCCTGTACCTCGTAGTGGCAGGT < 41bp 0.772985334280864 0.561679312507464 0.042792767 0.02471745 prediction 0.422612043546802 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26460038 chr6:26460041 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_88709 0 0 4 PRPF8 POSTAR2 ENCODE chr6:26460015-26460126
64251 chr16 30978309 30978309 1 + G A rs147752310 30978306 + 30978286 30978326 41 CTCGTGGACTGGGCCAAGAGCGGGGGCACTACGGGCATCGA CTCGTGGACTGGGCCAAGAGCGGAGGCACTACGGGCATCGA < 41bp 0.821626569983712 0.610320947616401 0.9415194 0.92272747 prediction 0.422611244734623 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30978306 chr16:30978309 synonymous SNV . 0 24 hm5C_associated_SNPs_88711 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30978305-30978334
64251 chr13 111372127 111372127 1 + G T UCEC 111372123 + 111372103 111372143 41 GAGATGATCGGCTGCGACAACGACGAGTGCCCCATCGAGTG GAGATGATCGGCTGCGACAACGACTAGTGCCCCATCGAGTG < 41bp 0.712686967136566 0.501381708267252 0.70212615 0.12969434 prediction 0.422610517738627 Functional Loss - ING1 ENSG00000153487 CDS Human protein_coding chr13:111372123 chr13:111372127 stopgain 0.998 1 25 hm5C_associated_SNPs_88713 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr13:111372120-111372140
64251 chr11 20409581 20409581 1 + G T LIHC 20409577 + 20409557 20409597 41 TGTGTTAGGCGGCCGGGGCGCTGTGGAGAATGAGGAGGACC TGTGTTAGGCGGCCGGGGCGCTGTTGAGAATGAGGAGGACC < 41bp 0.713443486455342 0.502139444359418 0.68702954 0.45687538 prediction 0.422608084191849 Functional Loss - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20409577 chr11:20409581 synonymous SNV . 0 25 hm5C_associated_SNPs_88715 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr11:20409543-20409584
64251 chr19 9271130 9271130 1 + G T UCS 9271127 + 9271107 9271147 41 TTCAGCCCTTAGGAGCCACGCAAGAACTCACCTCAAAGAGA TTCAGCCCTTAGGAGCCACGCAATAACTCACCTCAAAGAGA < 41bp 0.711297460199904 0.310343585807056 0.26279056 0.012471616 prediction 0.422594920399808 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271127 chr19:9271130 nonsynonymous SNV 0.765 3 24 hm5C_associated_SNPs_88717 0 0 2 ZNF622 POSTAR2 ENCODE chr19:9271106-9271186
64251 chr3 66431254 66431254 1 - G A PRAD 66431257 - 66431237 66431277 41 GGCCGGGTCGTATGCAGTGACTGCAACACCGAAGTGGACTG GGCCGGGTCGTATGCAGTGACTGTAACACCGAAGTGGACTG < 41bp 0.771005061215782 0.559711364752874 0.23418477 0.14093211 prediction 0.422587392925818 Functional Loss - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431257 chr3:66431254 synonymous SNV . 0 24 hm5C_associated_SNPs_88721 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr3:66431223-66431254
64251 chr20 48600730 48600730 1 + G A SKCM 48600727 + 48600707 48600747 41 TGAGGCCAAGGATCTCCAGGCTCGAAAGGCCTTCAACTGCA TGAGGCCAAGGATCTCCAGGCTCAAAAGGCCTTCAACTGCA < 41bp 0.816701729092138 0.605411296011447 0.21850401 0.32356507 prediction 0.422580866161383 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600727 chr20:48600730 nonsynonymous SNV 0.978 3 24 hm5C_associated_SNPs_88723 0 0 1 IGF2BP1 POSTAR2 ENCODE chr20:48600693-48600749
64251 chr3 183906113 183906113 1 + C T UCEC 183906110 + 183906090 183906130 41 CTGGAGATGACACTCCTGCCCTGCAGAGTGTGCTGGAGAGT CTGGAGATGACACTCCTGCCCTGTAGAGTGTGCTGGAGAGT < 41bp 0.782311211708146 0.571027785660356 0.043903887 0.047221303 prediction 0.42256685209558 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906110 chr3:183906113 stopgain 0.998 1 24 hm5C_associated_SNPs_88728 0 0 7 EFTUD2 POSTAR2 ENCODE chr3:183906071-183906118
64251 chr17 4923960 4923960 1 + G A GBM 4923957 + 4923937 4923977 41 AGCAAGGCATCGACATAAAGCTGGAAATGGAGAAGAGGTGC AGCAAGGCATCGACATAAAGCTGAAAATGGAGAAGAGGTGC < 41bp 0.804432144332524 0.593149969584505 0.18798059 0.19589764 prediction 0.422564349496039 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4923957 chr17:4923960 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_88729 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4923901-4923965
64251 chr3 58107011 58107011 1 + G A rs138449267 58107008 + 58106988 58107028 41 CAGGAGTTCACCGTTGATACCAGGGGGGCAGGAGGCCAGGG CAGGAGTTCACCGTTGATACCAGAGGGGCAGGAGGCCAGGG < 41bp 0.711281654687582 0.468735374898413 0.9342099 0.9080626 prediction 0.422563309375164 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58107008 chr3:58107011 synonymous SNV . 0 24 hm5C_associated_SNPs_88730 1 0 22 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:58106988-58107026
64251 chr6 33258544 33258544 1 + G T HNSC 33258542 + 33258522 33258562 41 TTGAGCGGCAGTCAGAGCAACAGAGGGAGACCCTTGCTCAG TTGAGCGGCAGTCAGAGCAACATAGGGAGACCCTTGCTCAG < 41bp 0.875734510376478 0.664456464969046 0.9090161 0.738964 prediction 0.422556090814865 Functional Loss - PFDN6 ENSG00000204220 CDS Human protein_coding chr6:33258542 chr6:33258544 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_88732 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:33258511-33258547
64251 chr16 81078429 81078429 1 + G A STAD 81078426 + 81078406 81078446 41 TGAGTTCTGGGTTTGAAACCCTGGGGAGCTTGTTCTTCACC TGAGTTCTGGGTTTGAAACCCTGAGGAGCTTGTTCTTCACC < 41bp 0.739137848850544 0.527860979875411 0.6046927 0.16231143 prediction 0.422553737950268 Functional Loss - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078426 chr16:81078429 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_88733 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:81078420-81078440
64251 chr17 45009485 45009485 1 + A C SKCM 45009481 + 45009461 45009501 41 CAGCACCTGCAGACTGCGCTCAGAAACTTCCAGCATCGGCG CAGCACCTGCAGACTGCGCTCAGACACTTCCAGCATCGGCG < 41bp 0.711275453313138 0.290668671023275 0.014170259 0.0060764253 prediction 0.422550906626277 Functional Loss - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45009481 chr17:45009485 nonsynonymous SNV 0.992 3 25 hm5C_associated_SNPs_88735 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45009424-45009488
64251 chr5 6755026 6755026 1 + C T COAD 6755024 + 6755004 6755044 41 GAGGAAAAAACACACACACACACGGGACAGTCTGCCCGTGA GAGGAAAAAACACACACACACATGGGACAGTCTGCCCGTGA < 41bp 0.835389314559332 0.624116721302114 0.12591207 0.3986981 prediction 0.422545186514436 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6755024 chr5:6755026 nonsynonymous SNV 0.936 4 23 hm5C_associated_SNPs_88738 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:6754983-6755042
64251 chr11 65744203 65744203 1 + C T UCEC 65744201 + 65744181 65744221 41 GAGGAGAACATCGGCTGGAGCACGGTGAACCTGGACGAGGA GAGGAGAACATCGGCTGGAGCATGGTGAACCTGGACGAGGA < 41bp 0.840089647960673 0.62882104611767 0.8647962 0.8745816 prediction 0.422537203686008 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65744201 chr11:65744203 nonsynonymous SNV 0.415 1 23 hm5C_associated_SNPs_88741 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:65744180-65744220
64251 chr12 123892824 123892824 1 + C T rs3934031 123892822 + 123892802 123892842 41 TTCTCGAAAGCTTACTGAGCCCCGGGCCCCAAGCACGGGCC TTCTCGAAAGCTTACTGAGCCCTGGGCCCCAAGCACGGGCC < 41bp 0.711268355347012 0.470143310126127 0.16352719 0.08422083 prediction 0.422536710694024 Functional Loss - KMT5A ENSG00000183955 UTR3 Human protein_coding chr12:123892822 chr12:123892824 . . 0 23 hm5C_associated_SNPs_88742 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:123892800-123892840
64251 chr19 45593576 45593576 1 + C T STAD 45593574 + 45593554 45593594 41 CCCTTCGGGAGCGTTACCTCCGCAGCCTGCTGGCCATGGTG CCCTTCGGGAGCGTTACCTCCGTAGCCTGCTGGCCATGGTG < 41bp 0.711268054402366 0.460070074097314 0.53620154 0.7106257 prediction 0.422536108804732 Functional Loss - GEMIN7 ENSG00000142252 CDS Human protein_coding chr19:45593574 chr19:45593576 synonymous SNV . 0 23 hm5C_associated_SNPs_88743 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:45593553-45593582
64251 chr16 4431318 4431318 1 + T C STAD 4431317 + 4431297 4431337 41 AGCCTGGTGCCTTCGACACGCTCGACCGCCTCCTGGAGCTC AGCCTGGTGCCTTCGACACGCCCGACCGCCTCCTGGAGCTC < 41bp 0.824367117612286 0.613111856048079 0.087899506 0.029102117 prediction 0.422510523128413 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4431317 chr16:4431318 nonsynonymous SNV 0.158 4 22 hm5C_associated_SNPs_88752 0 0 1 SND1 POSTAR2 ENCODE chr16:4431316-4431374
64251 chr19 57802985 57802985 1 + C T BLCA 57802983 + 57802963 57803003 41 AAGCAGCATGAGCGGATTCACACTGGTGAGAAGCCCTTTGT AAGCAGCATGAGCGGATTCACATTGGTGAGAAGCCCTTTGT < 41bp 0.711251868000307 0.456885944345745 0.09748766 0.10911828 prediction 0.422503736000615 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802983 chr19:57802985 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_88754 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:57802949-57802987
64251 chr20 33509154 33509154 1 + G T PRAD 33509152 + 33509132 33509172 41 GGCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGTGGGT GGCATAGCCGGGCATCCTTGCATGTGTTAGGCACAGTGGGT < 41bp 0.711251304698137 0.346065583854247 0.90930617 0.43873143 prediction 0.422502609396273 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33509152 chr20:33509154 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_88755 0 0 1 U2AF2 POSTAR2 ENCODE chr20:33509113-33509162
64251 chr5 36629622 36629622 1 + T C UCEC 36629621 + 36629601 36629641 41 AGTCAAGTACTTCTCCTTTCCTGGGGAACTTCTGATGAGGA AGTCAAGTACTTCTCCTTTCCCGGGGAACTTCTGATGAGGA < 41bp 0.807344825240355 0.596100133231572 0.5725282 0.9303014 prediction 0.422489384017566 Functional Loss - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36629621 chr5:36629622 synonymous SNV . 0 22 hm5C_associated_SNPs_88760 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:36629607-36629634
64251 chr19 41257379 41257379 1 + G A BLCA 41257376 + 41257356 41257396 41 AACAACCTCAATGAGAAGATCAAGAAGGATGGTGAGTTCTC AACAACCTCAATGAGAAGATCAAAAAGGATGGTGAGTTCTC < 41bp 0.711243945216869 0.474225864119373 0.3032977 0.15378541 prediction 0.422487890433737 Functional Loss - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41257376 chr19:41257379 synonymous SNV . 0 24 hm5C_associated_SNPs_88761 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:41257330-41257386
64251 chr11 118402921 118402921 1 + C T UCEC 118402918 + 118402898 118402938 41 AGACCTGGGCTGAGCGGGCACTTCGGGAGAATGAACGCCAC AGACCTGGGCTGAGCGGGCACTTTGGGAGAATGAACGCCAC < 41bp 0.727726472943623 0.516482850687298 0.5927846 0.42305788 prediction 0.422487244512652 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118402918 chr11:118402921 nonsynonymous SNV 0.052 4 24 hm5C_associated_SNPs_88762 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:118402889-118402926
64251 chr19 41884382 41884382 1 + C T UCEC 41884379 + 41884359 41884399 41 TTCCTGTCACCGCCTCTTCCCTCCGTGAGCGCTGGCCTGGG TTCCTGTCACCGCCTCTTCCCTCTGTGAGCGCTGGCCTGGG < 41bp 0.759140367565382 0.547899496309239 0.5354534 0.08823568 prediction 0.422481742512286 Functional Loss - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884379 chr19:41884382 synonymous SNV . 0 24 hm5C_associated_SNPs_88767 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:41884366-41884404
64251 chr14 105930441 105930441 1 + G T HNSC 105930439 + 105930419 105930459 41 TGGTGAACGGCACGGGGGCGCCGGGCCAGAGCCCTGGGGCT TGGTGAACGGCACGGGGGCGCCTGGCCAGAGCCCTGGGGCT < 41bp 0.711238154588211 0.338006202344509 0.8768029 0.5792875 prediction 0.422476309176421 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105930439 chr14:105930441 synonymous SNV . 0 23 hm5C_associated_SNPs_88772 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:105930440-105930460
64251 chr2 74687554 74687554 1 + C T CESC 74687551 + 74687531 74687571 41 CCCACCAGAGTGCCCCCCCTCATCAGGAGGGTGAGCCCGGG CCCACCAGAGTGCCCCCCCTCATTAGGAGGGTGAGCCCGGG < 41bp 0.713213353652746 0.50197686475531 0.39656258 0.18760464 prediction 0.422472977794871 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687551 chr2:74687554 stopgain 0.961 0 24 hm5C_associated_SNPs_88773 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:74687551-74687580
64251 chr3 43381982 43381982 1 + C T UCEC 43381980 + 43381960 43382000 41 GGGGACATAGCGGATCGAGACGCCATTGTAGAGTACGTCAA GGGGACATAGCGGATCGAGACGTCATTGTAGAGTACGTCAA < 41bp 0.873292138829778 0.662060927857003 0.3327664 0.15398902 prediction 0.422462421945549 Functional Loss - SNRK ENSG00000163788 CDS Human protein_coding chr3:43381980 chr3:43381982 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_88780 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:43381974-43381998
64251 chr20 55940480 55940480 1 + A T LAML 55940478 + 55940458 55940498 41 TGTGGGACCTCAGCAGTAACCAAGCGATACAGATCGCACAG TGTGGGACCTCAGCAGTAACCATGCGATACAGATCGCACAG < 41bp 0.717390915222925 0.506162475821188 0.8896823 0.43134606 prediction 0.422456878803474 Functional Loss - RAE1 ENSG00000101146 CDS Human protein_coding chr20:55940478 chr20:55940480 nonsynonymous SNV 0.938 4 23 hm5C_associated_SNPs_88781 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55940445-55940482
64251 chr11 46338965 46338965 1 + C T rs77924634 46338963 + 46338943 46338983 41 GCTCCCTCGTGCCCTGCCTTCCCGAGTTCTCCTCCGGCTCC GCTCCCTCGTGCCCTGCCTTCCTGAGTTCTCCTCCGGCTCC < 41bp 0.863425282209986 0.652199759197022 0.21703985 0.18648165 prediction 0.422451046025929 Functional Loss - CREB3L1 ENSG00000157613 CDS Human protein_coding chr11:46338963 chr11:46338965 synonymous SNV . 0 23 hm5C_associated_SNPs_88782 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:46338963-46338999
64251 chr19 45910452 45910452 1 + G T SARC 45910448 + 45910428 45910468 41 GGCGCTGACGGGTCCAGATACGGAGCTGTGGCTTATTCAGG GGCGCTGACGGGTCCAGATACGGATCTGTGGCTTATTCAGG < 41bp 0.711221893664046 0.492548592790471 0.9082893 0.47851253 prediction 0.422443787328092 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45910448 chr19:45910452 nonsynonymous SNV 0.576 4 25 hm5C_associated_SNPs_88785 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:45910422-45910474
64251 chr7 77227175 77227175 1 + G A UCEC 77227172 + 77227152 77227192 41 TATTTAGGAGGATGAACAAGCAAGAACAGACTACTTCATCA TATTTAGGAGGATGAACAAGCAAAAACAGACTACTTCATCA < 41bp 0.733740002147447 0.522520032802154 0.33677962 0.25004524 prediction 0.422439938690586 Functional Loss - PTPN12 ENSG00000127947 CDS Human protein_coding chr7:77227172 chr7:77227175 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_88788 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221663 chr7:77227160-77227180
64251 chr21 47412704 47412704 1 + C T READ 47412702 + 47412682 47412722 41 ACCACGGGGGACCCCAGGCACGCGGGGACCAAGAGGAGACC ACCACGGGGGACCCCAGGCACGTGGGGACCAAGAGGAGACC < 41bp 0.824273246028061 0.613056721530958 0.5531143 0.52430123 prediction 0.422433048994205 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47412702 chr21:47412704 nonsynonymous SNV 0.119 5 23 hm5C_associated_SNPs_88793 0 0 2 PPIG POSTAR2 ENCODE chr21:47412673-47412720
64251 chr16 58287931 58287931 1 + G T LUSC 58287928 + 58287908 58287948 41 GGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGG GGCAGGCGTAGATCCAAATCCCGTACAGGTATGGACCGTGG < 41bp 0.711216175374445 0.315402215397675 0.14642349 0.055148035 prediction 0.42243235074889 Functional Loss - CCDC113 ENSG00000103021 CDS Human protein_coding chr16:58287928 chr16:58287931 synonymous SNV . 0 24 hm5C_associated_SNPs_88794 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:58287916-58287958
64251 chr9 117086345 117086345 1 + A T LUAD 117086341 + 117086321 117086361 41 CCACCTACCTGAATGTCCAGCGGGAAAATGGGACCATCTCC CCACCTACCTGAATGTCCAGCGGGTAAATGGGACCATCTCC < 41bp 0.887241523809463 0.676028245306701 0.676818 0.38246968 prediction 0.422426557005524 Functional Loss - ORM1 ENSG00000229314 CDS Human protein_coding chr9:117086341 chr9:117086345 nonsynonymous SNV 0.777 1 25 hm5C_associated_SNPs_88795 0 0 5 GRWD1 POSTAR2 ENCODE chr9:117086321-117086358
64251 chr1 244868944 244868944 1 + G A BLCA 244868941 + 244868921 244868961 41 CCCTTTCTACAGAGTTGCCTCCCGAAGGAGTGGCTCACGCC CCCTTTCTACAGAGTTGCCTCCCAAAGGAGTGGCTCACGCC < 41bp 0.793421903189095 0.582213044304977 0.32609984 0.088704735 prediction 0.422417717768236 Functional Loss - DESI2 ENSG00000121644 CDS Human protein_coding chr1:244868941 chr1:244868944 synonymous SNV . 0 24 hm5C_associated_SNPs_88798 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:244868900-244869060
64251 chr1 111437625 111437625 1 + G C LUAD 111437621 + 111437601 111437641 41 AGGGTCTGACCGACAGCATCCACCGTTACCACTCAGACAAT AGGGTCTGACCGACAGCATCCACCCTTACCACTCAGACAAT < 41bp 0.711203116339646 0.412179372883731 0.0033302307 0.004581094 prediction 0.422406232679292 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111437621 chr1:111437625 nonsynonymous SNV 0.011 1 25 hm5C_associated_SNPs_88801 0 0 3 LIN28B POSTAR2 ENCODE chr1:111437578-111437632
64251 chr1 111437623 111437623 1 + C T UCEC 111437621 + 111437601 111437641 41 AGGGTCTGACCGACAGCATCCACCGTTACCACTCAGACAAT AGGGTCTGACCGACAGCATCCATCGTTACCACTCAGACAAT < 41bp 0.711203116339646 0.430019140859808 0.0033302307 0.0037272573 prediction 0.422406232679292 Functional Loss - CD53 ENSG00000143119 CDS Human protein_coding chr1:111437621 chr1:111437623 synonymous SNV . 0 23 hm5C_associated_SNPs_88802 0 0 3 LIN28B POSTAR2 ENCODE chr1:111437578-111437632
64251 chr13 88327848 88327848 1 + G A rs200420794 88327845 + 88327825 88327865 41 TAACTGTGAGCTGTGAAAACCGGGGGATCATCAGTCTCTCT TAACTGTGAGCTGTGAAAACCGGAGGATCATCAGTCTCTCT < 41bp 0.779654425468877 0.568470906715989 0.9092721 0.8474023 prediction 0.422367037505777 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327845 chr13:88327848 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_88812 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:88327812-88327852
64251 chr15 39884972 39884972 1 + C T SKCM 39884970 + 39884950 39884990 41 ATGACAAGGACAACTGCAGACTCGTGCCCAATCCCGACCAG ATGACAAGGACAACTGCAGACTTGTGCCCAATCCCGACCAG < 41bp 0.711181095459583 0.442525066838336 0.08962503 0.1274409 prediction 0.422362190919165 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39884970 chr15:39884972 synonymous SNV . 0 23 hm5C_associated_SNPs_88814 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:39884958-39884984
64251 chr2 207655378 207655378 1 + C T GBM 207655375 + 207655355 207655395 41 GATTCCTTGCTATGAAAATGCGGCATTTGAATGCAATGGGT GATTCCTTGCTATGAAAATGCGGTATTTGAATGCAATGGGT < 41bp 0.729115694739031 0.517934623791809 0.22290105 0.31704968 prediction 0.422362141894445 Functional Loss - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207655375 chr2:207655378 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_88815 0 0 1 BUD13 POSTAR2 ENCODE chr2:207655285-207655383
64251 chr2 63834045 63834045 1 + G A UCEC 63834042 + 63834022 63834062 41 TCTCCCTATTAATGATTTCTCACGTGAGAAGATGGATCTTA TCTCCCTATTAATGATTTCTCACATGAGAAGATGGATCTTA < 41bp 0.726743205931421 0.515563886949664 0.23922822 0.10952109 prediction 0.422358637963514 Functional Loss - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63834042 chr2:63834045 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88816 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63834000-63834060
64251 chr17 32959784 32959784 1 + C T UCEC 32959782 + 32959762 32959802 41 GAGTCTCGAGGGTCCATGAACGCCAGGGTCACCTTCCGCTA GAGTCTCGAGGGTCCATGAACGTCAGGGTCACCTTCCGCTA < 41bp 0.86547817287092 0.654301206872138 0.5808465 0.46539813 prediction 0.422353931997564 Functional Loss - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32959782 chr17:32959784 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_88819 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:32959780-32959793
64251 chr3 45588912 45588912 1 + G A rs34965084 45588909 + 45588889 45588929 41 CCCGGGACCAGGACAAAGTCCACGAATTTGTTCTTCAAAGC CCCGGGACCAGGACAAAGTCCACAAATTTGTTCTTCAAAGC < 41bp 0.711174299926101 0.472303157939195 0.06836307 0.06127149 prediction 0.422348599852202 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45588909 chr3:45588912 nonsynonymous SNV 0.764 1 24 hm5C_associated_SNPs_88821 1 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:45588904-45588926
64251 chr1 10479791 10479791 1 + G A rs41274480 10479788 + 10479768 10479808 41 CATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGATC CATGGTGGCACCGTGTCATCCTCATCATACAATGCCTGATC < 41bp 0.711167548137434 0.468725891845196 0.07544595 0.021658808 prediction 0.422335096274867 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10479788 chr1:10479791 synonymous SNV . 0 24 hm5C_associated_SNPs_88827 0 0 21 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr1 10479790 10479790 1 + C T SKCM 10479788 + 10479768 10479808 41 CATGGTGGCACCGTGTCATCCTCGTCATACAATGCCTGATC CATGGTGGCACCGTGTCATCCTTGTCATACAATGCCTGATC < 41bp 0.711167548137434 0.434974708735552 0.07544595 0.025545537 prediction 0.422335096274867 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10479788 chr1:10479790 nonsynonymous SNV 0.822 3 23 hm5C_associated_SNPs_88828 0 0 20 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:10479740-10479800
64251 chr3 51663363 51663363 1 + G T CESC 51663360 + 51663340 51663380 41 GAATGTTTAGAAAGCTACTCCGGGAGGATCAATTGGAGCCT GAATGTTTAGAAAGCTACTCCGGTAGGATCAATTGGAGCCT < 41bp 0.711166302881888 0.321846968293015 0.9072672 0.8825985 prediction 0.422332605763776 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51663360 chr3:51663363 stopgain 0.998 1 24 hm5C_associated_SNPs_88829 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:51663350-51663388
64251 chr17 48819031 48819031 1 + C T UCEC 48819028 + 48819008 48819048 41 TCTTCAATAGGCCGCTGGCCCAACAGGCAAAAATGAAGAAA TCTTCAATAGGCCGCTGGCCCAATAGGCAAAAATGAAGAAA < 41bp 0.747580831067174 0.536418621885319 0.111830056 0.03303173 prediction 0.42232441836371 Functional Loss - LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48819028 chr17:48819031 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_88831 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:48819018-48819039
64251 chr17 65733720 65733720 1 + G T UCEC 65733718 + 65733698 65733738 41 TGTCATTGGGGACACAGTAACAGGACTTCTGGAAAGGTGTA TGTCATTGGGGACACAGTAACATGACTTCTGGAAAGGTGTA < 41bp 0.904132690538633 0.692985675780684 0.71527076 0.23378333 prediction 0.422294029515898 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65733718 chr17:65733720 stopgain 0.520 0 23 hm5C_associated_SNPs_88839 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65733628-65733731
64251 chr1 179319496 179319496 1 + C T COAD 179319494 + 179319474 179319514 41 TTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTT TTGCTGTATCTGCTGTAGTACATGAATATGCCTTGGCTGTT < 41bp 0.711145428337035 0.418275146202488 0.13536224 0.2026273 prediction 0.42229085667407 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179319494 chr1:179319496 synonymous SNV . 0 23 hm5C_associated_SNPs_88841 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:179319480-179319500
64251 chr1 179319497 179319497 1 + G A HNSC 179319494 + 179319474 179319514 41 TTGCTGTATCTGCTGTAGTACACGAATATGCCTTGGCTGTT TTGCTGTATCTGCTGTAGTACACAAATATGCCTTGGCTGTT < 41bp 0.711145428337035 0.47350655594038 0.13536224 0.06539777 prediction 0.42229085667407 Functional Loss - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179319494 chr1:179319497 nonsynonymous SNV 0.974 4 24 hm5C_associated_SNPs_88842 0 0 12 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:179319480-179319500
64251 chr2 196545561 196545561 1 + G T LUSC 196545559 + 196545539 196545579 41 GTGAACAGTATGAGCATAATCGGGTCCACAAACCTGATCGT GTGAACAGTATGAGCATAATCGTGTCCACAAACCTGATCGT < 41bp 0.711140770294377 0.362391269755813 0.856709 0.22908047 prediction 0.422281540588755 Functional Loss - SLC39A10 ENSG00000196950 CDS Human protein_coding chr2:196545559 chr2:196545561 synonymous SNV . 0 23 hm5C_associated_SNPs_88848 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:196545553-196545582
64251 chr1 32691906 32691906 1 + G A BRCA 32691903 + 32691883 32691923 41 TTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTGGT TTGTGAGCTTTTTTGACCTGCGGAATCCGAGCCAGATTGGT < 41bp 0.797803843954825 0.586667561398161 0.8300374 0.5917529 prediction 0.422272565113328 Functional Loss - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32691903 chr1:32691906 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_88851 0 0 25 TARDBP POSTAR2 DRA001158,DRS012387 chr1:32691844-32691911
64251 chr12 16516847 16516847 1 + C T PRAD 16516845 + 16516825 16516865 41 CTTCAGACTATTTGTCGGAGCACGGATCTACCACACCATTG CTTCAGACTATTTGTCGGAGCATGGATCTACCACACCATTG < 41bp 0.787675693151736 0.576542286302044 0.19522953 0.17694399 prediction 0.422266813699385 Functional Loss - MGST1 ENSG00000008394 CDS Human protein_coding chr12:16516845 chr12:16516847 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_88853 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:16516797-16516870
64251 chr1 29639144 29639144 1 + G A UCEC 29639141 + 29639121 29639161 41 CATGGCGTCCCCTACCATGCCACGGGGCTGCTGGCTTTCAT CATGGCGTCCCCTACCATGCCACAGGGCTGCTGGCTTTCAT < 41bp 0.792300965285854 0.581167863474484 0.30583078 0.16015312 prediction 0.422266203622741 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29639141 chr1:29639144 synonymous SNV . 0 24 hm5C_associated_SNPs_88854 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:29639136-29639164
64251 chr11 379551 379551 1 + C T STAD 379548 + 379528 379568 41 GACTGTCCGAGTACGTCTTCCTGCGGCTGCCGGGAGCCCGC GACTGTCCGAGTACGTCTTCCTGTGGCTGCCGGGAGCCCGC < 41bp 0.728585818104525 0.517453821988093 0.44225383 0.23706412 prediction 0.422263992232864 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:379548 chr11:379551 nonsynonymous SNV 0.952 3 24 hm5C_associated_SNPs_88857 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:379536-379569
64251 chr1 236341877 236341877 1 + T C LAML 236341876 + 236341856 236341896 41 GTGCTGTGTGCCGTCTCTCTCTCCATCTGTCTCTACAAAAT GTGCTGTGTGCCGTCTCTCTCCCCATCTGTCTCTACAAAAT < 41bp 0.858145214400136 0.647014638263844 0.917173 0.020070374 prediction 0.422261152272585 Functional Loss - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236341876 chr1:236341877 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_88859 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:236341840-236341878
64251 chr18 21059302 21059302 1 + A C OV 21059301 + 21059281 21059321 41 TTTTTCCAGAAAGGAGGAGTCAAGGAAGCCCTTAGTGAACG TTTTTCCAGAAAGGAGGAGTCCAGGAAGCCCTTAGTGAACG < 41bp 0.711130039451512 0.452808861261767 0.3980075 0.22517195 prediction 0.422260078903024 Functional Loss - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21059301 chr18:21059302 nonsynonymous SNV 0.969 0 22 hm5C_associated_SNPs_88860 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr18:21059289-21059315
64251 chr3 45559536 45559536 1 + G T PRAD 45559534 + 45559514 45559554 41 AAAGCTGAGGCCAGGAAGCTCTGGGAGTACAAGAACTCCGT AAAGCTGAGGCCAGGAAGCTCTTGGAGTACAAGAACTCCGT < 41bp 0.711129488074479 0.372735883090126 0.8703681 0.17760846 prediction 0.422258976148957 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45559534 chr3:45559536 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_88861 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:45559515-45559541
64251 chr17 27382857 27382857 1 + C T SKCM 27382855 + 27382835 27382875 41 CCCCTGATGAGCAGTTCATTCTCGATCGCCACCCAAAGTAT CCCCTGATGAGCAGTTCATTCTTGATCGCCACCCAAAGTAT < 41bp 0.881614788215365 0.670487586178773 0.30558434 0.02461335 prediction 0.422254404073183 Functional Loss - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27382855 chr17:27382857 synonymous SNV . 0 23 hm5C_associated_SNPs_88862 0 0 1 GRWD1 POSTAR2 ENCODE chr17:27382836-27382881
64251 chr3 44700567 44700567 1 + G A rs138185290 44700564 + 44700544 44700584 41 GATTTAGTCAGAGTGCAAACCTCGTTGTGCATCAGCGAATC GATTTAGTCAGAGTGCAAACCTCATTGTGCATCAGCGAATC < 41bp 0.711126405284243 0.474991359618681 0.1535255 0.15375564 prediction 0.422252810568486 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700564 chr3:44700567 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_88863 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:44700501-44700588
64251 chr3 44700566 44700566 1 + C T GBM 44700564 + 44700544 44700584 41 GATTTAGTCAGAGTGCAAACCTCGTTGTGCATCAGCGAATC GATTTAGTCAGAGTGCAAACCTTGTTGTGCATCAGCGAATC < 41bp 0.711126405284243 0.427899767477883 0.1535255 0.12021026 prediction 0.422252810568486 Functional Loss - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700564 chr3:44700566 synonymous SNV . 0 23 hm5C_associated_SNPs_88864 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:44700501-44700588
64251 chr18 9944934 9944934 1 + C T rs143372755 9944931 + 9944911 9944951 41 GCCATCTCAGGGTATAACTCCACCAGGGAATGCTCCGACTG GCCATCTCAGGGTATAACTCCACTAGGGAATGCTCCGACTG < 41bp 0.770469978306569 0.559343705579055 0.34060565 0.15859112 prediction 0.422252545455029 Functional Loss - VAPA ENSG00000101558 CDS Human protein_coding chr18:9944931 chr18:9944934 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88865 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9944867-9944965
64251 chr19 44681246 44681246 1 + G T UCEC 44681244 + 44681224 44681264 41 AATTCACTGTAGGATCCACACAGGAGAGAAACCATATAATT AATTCACTGTAGGATCCACACATGAGAGAAACCATATAATT < 41bp 0.899868736048205 0.688744127735638 0.27288583 0.06474051 prediction 0.422249216625133 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681244 chr19:44681246 stopgain 0.992 0 23 hm5C_associated_SNPs_88866 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44681158-44681252
64251 chr1 220970104 220970104 1 + G A STAD 220970101 + 220970081 220970121 41 CTTCGAGCCTCACATGCGACCGAGACGTCCTCATCAAATAG CTTCGAGCCTCACATGCGACCGAAACGTCCTCATCAAATAG < 41bp 0.823829321894785 0.612705805152155 0.120627135 0.007558346 prediction 0.42224703348526 Functional Loss - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220970101 chr1:220970104 nonsynonymous SNV 0.065 1 24 hm5C_associated_SNPs_88869 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:220970098-220970122
64251 chr12 4702224 4702224 1 + G A UCEC 4702221 + 4702201 4702241 41 CATATGAACAAAGTGAAATCCTGGGCTACGCGGAGCTGTGG CATATGAACAAAGTGAAATCCTGAGCTACGCGGAGCTGTGG < 41bp 0.78254216546121 0.571418847773789 0.9204291 0.727366 prediction 0.422246635374842 Functional Loss - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4702221 chr12:4702224 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_88870 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:4702203-4702226
64251 chr11 66299693 66299693 1 + G C rs556460213 66299689 + 66299669 66299709 41 AGTAGCAGGTTAGTGAGTACCTAGGGCGGCTCAACTCCTCC AGTAGCAGGTTAGTGAGTACCTAGCGCGGCTCAACTCCTCC < 41bp 0.885023963686179 0.673900805249494 0.42616048 0.12683865 prediction 0.42224631687337 Functional Loss - BBS1 ENSG00000174483;ENSG00000256349 UTR3 Human other chr11:66299689 chr11:66299693 . . 0 25 hm5C_associated_SNPs_88871 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:66299655-66299700
64251 chr21 38878508 38878508 1 + C T LUSC 38878505 + 38878485 38878525 41 GCTGCCGTGCAGGCCATGGACTGCGAGACACACAGTCCCCA GCTGCCGTGCAGGCCATGGACTGTGAGACACACAGTCCCCA < 41bp 0.74899859466078 0.537875673932966 0.15842772 0.15784523 prediction 0.422245841455627 Functional Loss - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38878505 chr21:38878508 synonymous SNV . 0 24 hm5C_associated_SNPs_88872 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr21:38878481-38878509
64251 chr1 230391065 230391065 1 + G T OV 230391063 + 230391043 230391083 41 GCAGCACCCCTACACGTTCCCGGGTGGCAGTGGCACTGTCT GCAGCACCCCTACACGTTCCCGTGTGGCAGTGGCACTGTCT < 41bp 0.711120101331606 0.348404782219874 0.8877245 0.074517995 prediction 0.422240202663213 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230391063 chr1:230391065 nonsynonymous SNV 0.763 4 23 hm5C_associated_SNPs_88875 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:230391053-230391080
64251 chr16 88779098 88779098 1 + C T rs76614176 88779095 + 88779075 88779115 41 CTGGTGGGATCCGAGGGGGCCTACAAGGCGGCCGTGGACAG CTGGTGGGATCCGAGGGGGCCTATAAGGCGGCCGTGGACAG < 41bp 0.742376611242787 0.531257469836483 0.9291582 0.90790474 prediction 0.422238282812609 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779095 chr16:88779098 synonymous SNV . 0 24 hm5C_associated_SNPs_88878 0 0 2 BUD13 POSTAR2 ENCODE chr16:88779032-88779110
64251 chr8 79627485 79627485 1 + C T SKCM 79627482 + 79627462 79627502 41 TGTCAAACCCCGAAATTCCACACCACCTAGTTTGGCAAGAA TGTCAAACCCCGAAATTCCACACTACCTAGTTTGGCAAGAA < 41bp 0.765186861629959 0.554067843282474 0.017286092 0.035634458 prediction 0.422238036694971 Functional Loss - ZC2HC1A ENSG00000104427 CDS Human protein_coding chr8:79627482 chr8:79627485 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_88879 0 0 1 U2AF2 POSTAR2 ENCODE chr8:79627448-79627523
64251 chr4 57891674 57891674 1 + C T CESC 57891672 + 57891652 57891692 41 CTAGGGGACCTATTCAGATCCTCAATAGACAGCCCATGGAG CTAGGGGACCTATTCAGATCCTTAATAGACAGCCCATGGAG < 41bp 0.711115585496508 0.408320996114896 0.44135037 0.049859434 prediction 0.422231170993015 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57891672 chr4:57891674 synonymous SNV . 0 23 hm5C_associated_SNPs_88882 0 0 2 PRPF8 POSTAR2 ENCODE chr4:57891666-57891724
64251 chr7 27831706 27831706 1 + G A STAD 27831703 + 27831683 27831723 41 CTCGGCAAGAAGTTGTCTTTCTGGCTAAAGAACTCAGTGAT CTCGGCAAGAAGTTGTCTTTCTGACTAAAGAACTCAGTGAT < 41bp 0.793417293810903 0.582302586216644 0.39198646 0.15717939 prediction 0.422229415188517 Functional Loss - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27831703 chr7:27831706 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_88883 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chr7:27831687-27831712
64251 chr22 45927174 45927174 1 + G A BLCA 45927171 + 45927151 45927191 41 TCATTGAGGTTGAGGAGGAACAAGAGGACCCATATCTGAAT TCATTGAGGTTGAGGAGGAACAAAAGGACCCATATCTGAAT < 41bp 0.794284258694097 0.583172220259187 0.44028157 0.109624475 prediction 0.422224076869819 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45927171 chr22:45927174 nonsynonymous SNV 0.857 2 24 hm5C_associated_SNPs_88888 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr22:45927160-45927180
64251 chr2 113310287 113310287 1 + G A STAD 113310284 + 113310264 113310304 41 TTATATGCTTTGTCTCATGACGCGAAAGCTCTTTGCTTTAG TTATATGCTTTGTCTCATGACGCAAAAGCTCTTTGCTTTAG < 41bp 0.78304237525617 0.571931809131957 0.30400476 0.072659016 prediction 0.422221132248428 Functional Loss - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113310284 chr2:113310287 nonsynonymous SNV 0.828 1 24 hm5C_associated_SNPs_88891 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113310275-113310297
64251 chr4 146032204 146032204 1 + A C PRAD 146032203 + 146032183 146032223 41 CTTGTGCTGTCGTTTGCATACAGAAAGCTGATATGTAGGTT CTTGTGCTGTCGTTTGCATACCGAAAGCTGATATGTAGGTT < 41bp 0.71111042348295 0.453255132964083 0.29686373 0.30244255 prediction 0.4222208469659 Functional Loss - ABCE1 ENSG00000164163 CDS Human protein_coding chr4:146032203 chr4:146032204 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_88892 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr4:146032177-146032206
64251 chrX 117526873 117526873 1 + G A UCEC 117526870 + 117526850 117526890 41 GAGAAACCAGTAGATGAAACCACGAAGTTAACTCAAACAAG GAGAAACCAGTAGATGAAACCACAAAGTTAACTCAAACAAG < 41bp 0.740326863261977 0.529217557902536 0.07455742 0.11960217 prediction 0.422218610718883 Functional Loss - WDR44 ENSG00000131725 CDS Human protein_coding chrX:117526870 chrX:117526873 synonymous SNV . 0 24 hm5C_associated_SNPs_88894 0 0 1 UCHL5 POSTAR2 ENCODE chrX:117526821-117526902
64251 chr19 35175596 35175596 1 + C T LGG 35175594 + 35175574 35175614 41 GCAAACAGTCAATCCTCAGTCGCCACTGGAGAATTCATACA GCAAACAGTCAATCCTCAGTCGTCACTGGAGAATTCATACA < 41bp 0.85638026441881 0.645275533347905 0.2184493 0.049497038 prediction 0.422209462141809 Functional Loss - ZNF302 ENSG00000089335 CDS Human protein_coding chr19:35175594 chr19:35175596 synonymous SNV . 0 23 hm5C_associated_SNPs_88900 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:35175575-35175613
64251 chr16 89220529 89220529 1 + G T LUAD 89220527 + 89220507 89220547 41 GGCCCCGTACGCGGTGCCCTCGGAGCTGGTGCTGGTGGAGG GGCCCCGTACGCGGTGCCCTCGTAGCTGGTGCTGGTGGAGG < 41bp 0.711102001827984 0.354117721069812 0.9031272 0.20320258 prediction 0.422204003655968 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89220527 chr16:89220529 stopgain 0.704 0 23 hm5C_associated_SNPs_88902 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:89220522-89220543
64251 chr16 28883134 28883134 1 + C T UCEC 28883131 + 28883111 28883151 41 GGGCCTCTCAGACCGCCCCTCGGCATCCATCTCCCCCAGCT GGGCCTCTCAGACCGCCCCTCGGTATCCATCTCCCCCAGCT < 41bp 0.731725463548408 0.520624310089791 0.75962245 0.37427112 prediction 0.422202306917233 Functional Loss - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883131 chr16:28883134 nonsynonymous SNV 0.981 3 24 hm5C_associated_SNPs_88903 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:28883107-28883159
64251 chr19 35504577 35504577 1 + C T SKCM 35504574 + 35504554 35504594 41 ACGCCCAACCTTTCCCGAGCCAGCAGCGACGCAGACCATGG ACGCCCAACCTTTCCCGAGCCAGTAGCGACGCAGACCATGG < 41bp 0.739857214934364 0.528758941119406 0.41762412 0.048654705 prediction 0.422196547629915 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504574 chr19:35504577 synonymous SNV . 0 24 hm5C_associated_SNPs_88904 0 0 5 BUD13 POSTAR2 ENCODE chr19:35504576-35504579
64251 chr7 150767561 150767561 1 + A T LUAD 150767557 + 150767537 150767577 41 CCCCCAGCGTGAGCTGCCGCCTCCAGCACCACCAGCTGGCA CCCCCAGCGTGAGCTGCCGCCTCCTGCACCACCAGCTGGCA < 41bp 0.711097010256519 0.360477378744879 0.93954575 0.09730223 prediction 0.422194020513037 Functional Loss - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150767557 chr7:150767561 synonymous SNV . 0 25 hm5C_associated_SNPs_88905 0 0 2 FXR2 POSTAR2 ENCODE chr7:150767543-150767563
64251 chr5 135391404 135391404 1 + C T UCEC 135391402 + 135391382 135391422 41 AGAACAGCTGCATCGCGGCCCACGACAAGAGGGGGAGGTAC AGAACAGCTGCATCGCGGCCCATGACAAGAGGGGGAGGTAC < 41bp 0.711094740647191 0.424418733088363 0.017695129 0.036256313 prediction 0.422189481294382 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135391402 chr5:135391404 synonymous SNV . 0 23 hm5C_associated_SNPs_88909 0 0 5 NOL12 POSTAR2 ENCODE chr5:135391368-135391448
64251 chr8 17401103 17401103 1 + C T STAD 17401100 + 17401080 17401120 41 GCTTCAGTGATGGCTGGCCTCTGCTATGCCGAATTTGGGGC GCTTCAGTGATGGCTGGCCTCTGTTATGCCGAATTTGGGGC < 41bp 0.74254055896003 0.531448135934632 0.28580022 0.09555921 prediction 0.422184846050796 Functional Loss - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17401100 chr8:17401103 synonymous SNV . 0 24 hm5C_associated_SNPs_88910 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:17401049-17401111
64251 chr20 62641575 62641575 1 + G A rs2427588 62641572 + 62641552 62641592 41 GCCCTCGAGCATGTTCCAAACTCGGTTCGCTTGTGGAAAGC GCCCTCGAGCATGTTCCAAACTCAGTTCGCTTGTGGAAAGC < 41bp 0.809813139667382 0.598723868305832 0.27002093 0.09666768 prediction 0.422178542723099 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62641572 chr20:62641575 synonymous SNV . 0 24 hm5C_associated_SNPs_88912 1 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr20:62641574-62641575
64251 chr19 34292106 34292106 1 + G T LUSC 34292103 + 34292083 34292123 41 CATGTCCCGGCTGTCTCTCACCCGGTCGCCTGTGTCTCCCC CATGTCCCGGCTGTCTCTCACCCTGTCGCCTGTGTCTCCCC < 41bp 0.711082415623192 0.300799313364308 0.4695816 0.17609677 prediction 0.422164831246385 Functional Loss - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34292103 chr19:34292106 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_88917 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34292079-34292106
64251 chr20 333887 333887 1 + C T UCEC 333884 + 333864 333904 41 CCTCGGGGACCCTGCTTCTGCTGCTGGGTGTGGCGGCTCTG CCTCGGGGACCCTGCTTCTGCTGTTGGGTGTGGCGGCTCTG < 41bp 0.711080970956843 0.498530602696257 0.33720833 0.21146846 prediction 0.422161941913686 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:333884 chr20:333887 synonymous SNV . 0 24 hm5C_associated_SNPs_88918 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:333856-333896
64251 chr1 180217561 180217561 1 + G A SKCM 180217558 + 180217538 180217578 41 GGACAGGTGCTTCTCCAGGGCTGGGAGCGTCTACTGCAAGG GGACAGGTGCTTCTCCAGGGCTGAGAGCGTCTACTGCAAGG < 41bp 0.809444096369114 0.598367098242395 0.8148953 0.333387 prediction 0.422153996253438 Functional Loss - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180217558 chr1:180217561 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_88920 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr1:180217529-180217574
64251 chr17 62081150 62081150 1 - G A HNSC 62081153 - 62081133 62081173 41 CTTCGGGAAGGCAGCCCCTGCTCCGCAGGAGGCCACAGCCA CTTCGGGAAGGCAGCCCCTGCTCTGCAGGAGGCCACAGCCA < 41bp 0.711075143169321 0.496140517669176 0.16779178 0.15382677 prediction 0.422150286338643 Functional Loss - ICAM2 ENSG00000108622 CDS Human protein_coding chr17:62081153 chr17:62081150 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_88921 0 0 1 SND1 POSTAR2 ENCODE chr17:62081060-62081169
64251 chr14 24771457 24771457 1 + C T LUAD 24771454 + 24771434 24771474 41 CTAGTCCCCTACTGCTATTTCTCCGAGATCAGACGAGTTCC CTAGTCCCCTACTGCTATTTCTCTGAGATCAGACGAGTTCC < 41bp 0.771577522725795 0.560506804808275 0.119693905 0.11662564 prediction 0.422141435835041 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771454 chr14:24771457 stopgain 0.991 1 24 hm5C_associated_SNPs_88925 0 0 2 FASTKD2 POSTAR2 ENCODE chr14:24771445-24771506
64251 chr19 35517264 35517264 1 + C T rs573159322 35517262 + 35517242 35517282 41 CCCCCCACTAACTTATTTTGCCCGGCTGAGGTTGTGGGGGG CCCCCCACTAACTTATTTTGCCTGGCTGAGGTTGTGGGGGG < 41bp 0.721508697855257 0.510439370767396 0.54909927 0.6620168 prediction 0.422138654175722 Functional Loss - GRAMD1A ENSG00000089351 UTR3 Human protein_coding chr19:35517262 chr19:35517264 . . 0 23 hm5C_associated_SNPs_88927 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35517237-35517324
64251 chrX 106890893 106890893 1 + C T LUSC 106890890 + 106890870 106890910 41 ATCTTGACTCATGGAATCTTCTCCGGTCCTGCTATTTCTCG ATCTTGACTCATGGAATCTTCTCTGGTCCTGCTATTTCTCG < 41bp 0.760252639471367 0.549186283534293 0.15659788 0.12540796 prediction 0.422132711874148 Functional Loss - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106890890 chrX:106890893 synonymous SNV . 0 24 hm5C_associated_SNPs_88931 0 0 20 FMR1 POSTAR2 GSE39682,GSM977616 chrX:106890872-106890896
64251 chr3 9427538 9427538 1 + G A rs191587463 9427535 + 9427515 9427555 41 GTTGTTACTTTCTCCTGGATCACGATTCACATTTAATTGCT GTTGTTACTTTCTCCTGGATCACAATTCACATTTAATTGCT < 41bp 0.735727173724992 0.524662516482498 0.07687509 0.16820794 prediction 0.422129314484987 Functional Loss - THUMPD3-AS1 ENSG00000206573 ncRNA_exonic Human antisense chr3:9427535 chr3:9427538 . . 0 24 hm5C_associated_SNPs_88933 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:9427518-9427550
64251 chr7 104719376 104719376 1 + G A COAD 104719373 + 104719353 104719393 41 AAGGACTTTTGGGAATGAGGCTCGATTCATCAGGCGGTCTT AAGGACTTTTGGGAATGAGGCTCAATTCATCAGGCGGTCTT < 41bp 0.711063563782374 0.487610216889938 0.11805543 0.07913777 prediction 0.422127127564749 Functional Loss - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104719373 chr7:104719376 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_88934 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:104719327-104719380
64251 chr12 7302202 7302202 1 + G A UCS 7302199 + 7302179 7302219 41 TGGTGGGGGATGACCTGGATCCCGAGCGGGAAAGCCTGCTC TGGTGGGGGATGACCTGGATCCCAAGCGGGAAAGCCTGCTC < 41bp 0.807415963078895 0.596354134392968 0.30344006 0.14227113 prediction 0.422123657371854 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7302199 chr12:7302202 nonsynonymous SNV 0.862 3 24 hm5C_associated_SNPs_88935 0 0 7 LSM11 POSTAR2 ENCODE chr12:7302179-7302271
64251 chr16 30676118 30676118 1 + G A COAD 30676115 + 30676095 30676135 41 GAGGTGGTGGGGGCAGGGGGCTCGGCCCGGCCCCTGGCCTT GAGGTGGTGGGGGCAGGGGGCTCAGCCCGGCCCCTGGCCTT < 41bp 0.798475891801834 0.587420916917617 0.9017948 0.8855022 prediction 0.422109949768434 Functional Loss - FBRS ENSG00000156860 CDS Human protein_coding chr16:30676115 chr16:30676118 synonymous SNV . 0 24 hm5C_associated_SNPs_88937 0 0 2 LARP4 POSTAR2 ENCODE chr16:30676110-30676150
64251 chr6 26158445 26158445 1 + G A BLCA 26158442 + 26158422 26158462 41 CCTGCCCCAAAGAAGGGCTCCAAGAAGGCGGTGACTAAGGC CCTGCCCCAAAGAAGGGCTCCAAAAAGGCGGTGACTAAGGC < 41bp 0.777806644230765 0.566759721389528 0.19474551 0.25593323 prediction 0.422093845682473 Functional Loss - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158442 chr6:26158445 synonymous SNV . 0 24 hm5C_associated_SNPs_88945 0 0 55 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26158340-26158480
64251 chr22 42276798 42276798 1 + G A BLCA 42276795 + 42276775 42276815 41 GGGCACTGCCCACCTCCCGCCTGGACCTGGCCTGCAGCCTC GGGCACTGCCCACCTCCCGCCTGAACCTGGCCTGCAGCCTC < 41bp 0.812402405857648 0.601356696498226 0.43832365 0.31033033 prediction 0.422091418718845 Functional Loss - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42276795 chr22:42276798 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_88947 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:42276795-42276820
64251 chr14 93303751 93303751 1 + T C COAD 93303750 + 93303730 93303770 41 GTATTCGCCTGGGAATTTTTCTCCGAAGATACCCCATAGCG GTATTCGCCTGGGAATTTTTCCCCGAAGATACCCCATAGCG < 41bp 0.711041578709075 0.446704878435912 0.06562969 0.050649285 prediction 0.42208315741815 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93303750 chr14:93303751 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_88949 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:93303730-93303771
64251 chr1 33745922 33745922 1 + G A UCEC 33745919 + 33745899 33745939 41 CCATCAAGACAATCCAGGGCCACGGCCTGCTTGGCCCCCCC CCATCAAGACAATCCAGGGCCACAGCCTGCTTGGCCCCCCC < 41bp 0.711039122602774 0.464138478975779 0.0496082 0.010614067 prediction 0.422078245205547 Functional Loss - ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33745919 chr1:33745922 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_88951 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:33745906-33745930
64251 chr6 116747964 116747964 1 + C T STAD 116747962 + 116747942 116747982 41 ACCAACTGTATGGCTTTGCTCACGGGAAGCCTAGTCCTGAT ACCAACTGTATGGCTTTGCTCATGGGAAGCCTAGTCCTGAT < 41bp 0.852102917076676 0.641063949328035 0.92309046 0.898425 prediction 0.422077935497281 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116747962 chr6:116747964 nonsynonymous SNV 0.822 3 23 hm5C_associated_SNPs_88952 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:116747938-116747975
64251 chr8 6605223 6605223 1 + C T LGG 6605221 + 6605201 6605241 41 ATTAAAACATGTGCTAACACCACGAATAAAGGCAACTCACG ATTAAAACATGTGCTAACACCATGAATAAAGGCAACTCACG < 41bp 0.711038907466608 0.416823768497034 0.28482914 0.18511829 prediction 0.422077814933215 Functional Loss - AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6605221 chr8:6605223 stopgain 0.994 1 23 hm5C_associated_SNPs_88953 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:6605217-6605251
64251 chr15 44788617 44788617 1 + C T rs871923 44788615 + 44788595 44788635 41 AGTGGTTATTCATCAGCCCACGCGGAGGCCACCTATGAAGA AGTGGTTATTCATCAGCCCACGTGGAGGCCACCTATGAAGA < 41bp 0.711037465112783 0.42665733808007 0.75959766 0.5772181 prediction 0.422074930225567 Functional Loss - CTDSPL2 ENSG00000137770 CDS Human protein_coding chr15:44788615 chr15:44788617 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_88954 0 0 4 GRWD1 POSTAR2 ENCODE chr15:44788576-44788656
64251 chr15 44788618 44788618 1 + G A BLCA 44788615 + 44788595 44788635 41 AGTGGTTATTCATCAGCCCACGCGGAGGCCACCTATGAAGA AGTGGTTATTCATCAGCCCACGCAGAGGCCACCTATGAAGA < 41bp 0.711037465112783 0.46334898971274 0.75959766 0.2901434 prediction 0.422074930225567 Functional Loss - CTDSPL2 ENSG00000137770 CDS Human protein_coding chr15:44788615 chr15:44788618 synonymous SNV . 0 24 hm5C_associated_SNPs_88955 0 0 4 GRWD1 POSTAR2 ENCODE chr15:44788576-44788656
64251 chr5 637837 637837 1 + G T CESC 637835 + 637815 637855 41 CCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGG CCAAGGAGAGCCTGAGCAGACATGACAGCTCAGAAAGCAGG < 41bp 0.906057364726189 0.695024576340498 0.4661453 0.24214041 prediction 0.422065576771383 Functional Loss - CEP72 ENSG00000112877 CDS Human protein_coding chr5:637835 chr5:637837 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_88957 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:637820-637860
64251 chr16 31000034 31000034 1 + G A rs552048466 31000031 + 31000011 31000051 41 AAGTTCTAGGGCCGTCAGGACACGGGAGGGTTTGGGGACAG AAGTTCTAGGGCCGTCAGGACACAGGAGGGTTTGGGGACAG < 41bp 0.755609978062487 0.544577514791917 0.4834011 0.3599972 prediction 0.42206492654114 Functional Loss - HSD3B7 ENSG00000099377 UTR3 Human protein_coding chr16:31000031 chr16:31000034 . . 0 24 hm5C_associated_SNPs_88958 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30999828-31000057
64251 chr22 29169747 29169747 1 + G A UCEC 29169744 + 29169724 29169764 41 ACTGTAAAAAGAAACACAAGCGAGAGGAGGAGGAGGATGAT ACTGTAAAAAGAAACACAAGCGAAAGGAGGAGGAGGATGAT < 41bp 0.76304113121066 0.55201304753111 0.44348696 0.2573804 prediction 0.422056167359099 Functional Loss - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29169744 chr22:29169747 nonsynonymous SNV 0.957 0 24 hm5C_associated_SNPs_88963 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:29169732-29169765
64251 chr2 62132968 62132968 1 + T C LIHC 62132967 + 62132947 62132987 41 CCGAGGAGTTCCGCCCCTTTCTGGCAAAGATGAGGGGGATT CCGAGGAGTTCCGCCCCTTTCCGGCAAAGATGAGGGGGATT < 41bp 0.711026601866228 0.485440087231424 0.23866424 0.68568635 prediction 0.422053203732457 Functional Loss - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62132967 chr2:62132968 nonsynonymous SNV 0.652 3 22 hm5C_associated_SNPs_88965 0 0 1 SRSF1 POSTAR2 ENCODE chr2:62132858-62132989
64251 chr2 62132970 62132970 1 + G A UCEC 62132967 + 62132947 62132987 41 CCGAGGAGTTCCGCCCCTTTCTGGCAAAGATGAGGGGGATT CCGAGGAGTTCCGCCCCTTTCTGACAAAGATGAGGGGGATT < 41bp 0.711026601866228 0.463327755118204 0.23866424 0.15363356 prediction 0.422053203732457 Functional Loss - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62132967 chr2:62132970 nonsynonymous SNV 0.646 0 24 hm5C_associated_SNPs_88966 0 0 1 SRSF1 POSTAR2 ENCODE chr2:62132858-62132989
64251 chrX 51640956 51640956 1 + C T UCEC 51640954 + 51640934 51640974 41 TGTATATTCTCATCAGTACCCCCGAGTCCCTGGCTGGCATA TGTATATTCTCATCAGTACCCCTGAGTCCCTGGCTGGCATA < 41bp 0.711026281243261 0.415391962310217 0.60770494 0.4256897 prediction 0.422052562486521 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51640954 chrX:51640956 synonymous SNV . 0 23 hm5C_associated_SNPs_88967 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:51640950-51640983
64251 chr4 8472861 8472861 1 + C T LUSC 8472858 + 8472838 8472878 41 ACGAGCTGGACACGGAGACCCTGCGGAGGCTGAAGCGGGAG ACGAGCTGGACACGGAGACCCTGTGGAGGCTGAAGCGGGAG < 41bp 0.766412979508787 0.555387074030326 0.3057027 0.19985765 prediction 0.422051810956923 Functional Loss - TRMT44 ENSG00000155275 CDS Human protein_coding chr4:8472858 chr4:8472861 nonsynonymous SNV 0.787 2 24 hm5C_associated_SNPs_88968 0 0 1 DDX6 POSTAR2 ENCODE chr4:8472847-8472887
64251 chr1 11808642 11808642 1 + C T COAD 11808640 + 11808620 11808660 41 TCTACCACATGTACCGGGAGCGCGGGGGTGAGCTCCTGGTC TCTACCACATGTACCGGGAGCGTGGGGGTGAGCTCCTGGTC < 41bp 0.820912089169741 0.60988713284209 0.7324255 0.80769014 prediction 0.422049912655301 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808640 chr1:11808642 nonsynonymous SNV 0.878 1 23 hm5C_associated_SNPs_88969 0 0 3 SND1 POSTAR2 ENCODE chr1:11808579-11808668
64251 chr9 114411754 114411754 1 + T C KIRC 114411753 + 114411733 114411773 41 TTTTTCAGCTGGTGGAATAGCTACAATAAGGCAATCAGCTA TTTTTCAGCTGGTGGAATAGCCACAATAAGGCAATCAGCTA < 41bp 0.815571396797822 0.604555331349853 0.82924056 0.27453658 prediction 0.422032130895938 Functional Loss - DNAJC25 ENSG00000059769 CDS Human protein_coding chr9:114411753 chr9:114411754 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_88976 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr9:114411732-114411756
64251 chr16 2257325 2257325 1 + C T rs35003025 2257322 + 2257302 2257342 41 CACATCGATCCCGACGCCAGCTACATGGCAGCTGTCAATAG CACATCGATCCCGACGCCAGCTATATGGCAGCTGTCAATAG < 41bp 0.748306283043811 0.537291344673626 0.1300272 0.09058282 prediction 0.422029876740369 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257322 chr16:2257325 synonymous SNV . 0 24 hm5C_associated_SNPs_88977 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2257304-2257335
64251 chr16 56867301 56867301 1 + G A PAAD 56867298 + 56867278 56867318 41 GAAGCTGCTTTTAAAGTCCTCTGGACAGAGTGCTCAGCTCC GAAGCTGCTTTTAAAGTCCTCTGAACAGAGTGCTCAGCTCC < 41bp 0.71101335720442 0.463836384918412 0.14556667 0.09417564 prediction 0.42202671440884 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56867298 chr16:56867301 nonsynonymous SNV 0.885 2 24 hm5C_associated_SNPs_88979 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr16:56867281-56867304
64251 chr12 113698196 113698196 1 + G A CESC 113698193 + 113698173 113698213 41 ATGGCGGCAGCTATGCCATCCACGACTCCCAGGCCCCCAGT ATGGCGGCAGCTATGCCATCCACAACTCCCAGGCCCCCAGT < 41bp 0.825810657078063 0.614798853333482 0.20766363 0.062012374 prediction 0.42202360748916 Functional Loss - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113698193 chr12:113698196 nonsynonymous SNV 0.104 0 24 hm5C_associated_SNPs_88981 0 0 1 BUD13 POSTAR2 ENCODE chr12:113698145-113698228
64251 chr17 40706435 40706435 1 - C T LIHC 40706438 - 40706418 40706458 41 GCGGTGTGCACTGGGCCGCACTCGATCAGGCTCAAGCTGCT GCGGTGTGCACTGGGCCGCACTCAATCAGGCTCAAGCTGCT < 41bp 0.792414034667297 0.581405119782749 0.86962646 0.5481659 prediction 0.422017829769097 Functional Loss - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40706438 chr17:40706435 synonymous SNV . 0 24 hm5C_associated_SNPs_88983 0 0 1 DDX3X POSTAR2 ENCODE chr17:40706406-40706451
64251 chr19 32844925 32844925 1 + G C LUAD 32844924 + 32844904 32844944 41 AATAAAAAAGGGCATGTTAACGTGATAGTGGAGCGATTGCC AATAAAAAAGGGCATGTTAACCTGATAGTGGAGCGATTGCC < 41bp 0.71100623029712 0.395013195769334 0.7075727 0.29702634 prediction 0.42201246059424 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32844924 chr19:32844925 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_88986 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:32844893-32844938
64251 chr3 100039673 100039673 1 + C T STAD 100039671 + 100039651 100039691 41 CTGTTTAAGGGAGATTGTTTCACGGAAAGGATTGGCTTATA CTGTTTAAGGGAGATTGTTTCATGGAAAGGATTGGCTTATA < 41bp 0.857908639139493 0.646902590134974 0.30650407 0.4184569 prediction 0.422012098009038 Functional Loss - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100039671 chr3:100039673 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_88987 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:100039653-100039676
64251 chr6 83074937 83074937 1 + A C rs144253219 83074936 + 83074916 83074956 41 CGCAATCTGACCGAGGTGCCCACGGACCTGCCCGCCTACGT CGCAATCTGACCGAGGTGCCCCCGGACCTGCCCGCCTACGT < 41bp 0.845114709598296 0.634110512906128 0.73205125 0.50637406 prediction 0.422008393384336 Functional Loss - TPBG ENSG00000146242 CDS Human protein_coding chr6:83074936 chr6:83074937 nonsynonymous SNV 0.029 1 22 hm5C_associated_SNPs_88989 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:83074936-83074937
64251 chr19 36259320 36259320 1 + G A ESCA 36259317 + 36259297 36259337 41 TTTCTCCAGGGAAGCGGATGCCCGATTATCGTTCCTGTTGG TTTCTCCAGGGAAGCGGATGCCCAATTATCGTTCCTGTTGG < 41bp 0.804649960812744 0.593650543598279 0.72372663 0.54542047 prediction 0.421998834428931 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36259317 chr19:36259320 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_88995 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:36259310-36259352
64251 chr16 90023952 90023952 1 + C T UCEC 90023949 + 90023929 90023969 41 TGGCCTCTGACGTCCAGCAGCTGCGGCAGGCGATCGAGGAG TGGCCTCTGACGTCCAGCAGCTGTGGCAGGCGATCGAGGAG < 41bp 0.732603790788546 0.521605808794435 0.5653984 0.36898124 prediction 0.421995963988223 Functional Loss - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90023949 chr16:90023952 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_88996 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:90023937-90023981
64251 chr20 44469778 44469778 1 + G A rs140975852 44469775 + 44469755 44469795 41 GCCCTGCAGCTGCTTGGGGACAAGAGCCTCCACCCTTTGCT GCCCTGCAGCTGCTTGGGGACAAAAGCCTCCACCCTTTGCT < 41bp 0.734482066355155 0.523486039976822 0.43011087 0.10211295 prediction 0.421992052756664 Functional Loss - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44469775 chr20:44469778 synonymous SNV . 0 24 hm5C_associated_SNPs_89001 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:44469772-44469830
64251 chr22 21801229 21801229 1 + G T rs530313087 21801225 + 21801205 21801245 41 CAGAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGTCTA CAGAGCCGAGAGGAGGGAAGCCAGTGGTCCCAGCCCGTCTA < 41bp 0.718815886932496 0.507820420209519 0.9340255 0.46349305 prediction 0.421990933445954 Functional Loss - HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801225 chr22:21801229 . . 0 25 hm5C_associated_SNPs_89003 0 0 6 CSTF2T POSTAR2 ENCODE chr22:21801217-21801233
64251 chr6 133135750 133135750 1 + G A rs539423662 133135747 + 133135727 133135767 41 GAGTCGCGCGGAGGCGGAGGCTTGGGGTAAGTTGAGCGAGG GAGTCGCGCGGAGGCGGAGGCTTAGGGTAAGTTGAGCGAGG < 41bp 0.736216267888645 0.525221150169429 0.89933383 0.88471293 prediction 0.421990235438431 Functional Loss - RPS12 ENSG00000112306 UTR5 Human protein_coding chr6:133135747 chr6:133135750 . . 0 24 hm5C_associated_SNPs_89004 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:133135740-133135760
64251 chr3 196612556 196612556 1 + G A BLCA 196612553 + 196612533 196612573 41 CCACAACCTTCTGACTTTCCCATGAAGTTCAATGGGGAGAG CCACAACCTTCTGACTTTCCCATAAAGTTCAATGGGGAGAG < 41bp 0.71099469060211 0.476236101224173 0.38297868 0.2532088 prediction 0.42198938120422 Functional Loss - SENP5 ENSG00000119231 CDS Human protein_coding chr3:196612553 chr3:196612556 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_89005 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:196612519-196612556
64251 chr3 148712025 148712025 1 + T C UCEC 148712024 + 148712004 148712044 41 AGCACAGGACCACCAGGAGGCTGGTCGTGCTCGCCACCCCT AGCACAGGACCACCAGGAGGCCGGTCGTGCTCGCCACCCCT < 41bp 0.7936116290622 0.582618569655569 0.13479647 0.10183227 prediction 0.421986118813262 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148712024 chr3:148712025 nonsynonymous SNV 0.381 4 22 hm5C_associated_SNPs_89007 0 0 1 YBX3 POSTAR2 ENCODE chr3:148711989-148712045
64251 chr6 7580387 7580387 1 + G A SKCM 7580384 + 7580364 7580404 41 AGGAGGCTGCCAAGACCATTCAGGACAAAAATAAGGAGATC AGGAGGCTGCCAAGACCATTCAGAACAAAAATAAGGAGATC < 41bp 0.755139079189553 0.544147077703425 0.45469132 0.15461615 prediction 0.421984002972257 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7580384 chr6:7580387 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_89008 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7580375-7580397
64251 chr7 134613584 134613584 1 + C T READ 134613581 + 134613561 134613601 41 GCCGAGCCCGACAGGAACGGCTGCGGCAGAAGCAGGAGGAA GCCGAGCCCGACAGGAACGGCTGTGGCAGAAGCAGGAGGAA < 41bp 0.738560085464837 0.527568389229254 0.6396518 0.4443468 prediction 0.421983392471166 Functional Loss - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134613581 chr7:134613584 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89009 0 0 7 AGGF1 POSTAR2 ENCODE chr7:134613549-134613651
64251 chr4 1739354 1739354 1 + G A rs28654168 1739351 + 1739331 1739371 41 GGCCCACCCCCAGGTGTTCCCGCGCCTGGGGGCCCACCCCT GGCCCACCCCCAGGTGTTCCCGCACCTGGGGGCCCACCCCT < 41bp 0.834262817665284 0.623271646615422 0.92656505 0.9233442 prediction 0.421982342099725 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1739351 chr4:1739354 synonymous SNV . 0 24 hm5C_associated_SNPs_89010 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr4:1739352-1739383
64251 chr1 230338944 230338944 1 + C T GBM 230338941 + 230338921 230338961 41 GTTGGAGGGACGATGGTCCGCTCCGGGCAGGACCCTTACGC GTTGGAGGGACGATGGTCCGCTCTGGGCAGGACCCTTACGC < 41bp 0.769738473300395 0.558751567212607 0.24645448 0.1959669 prediction 0.421973812175576 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230338941 chr1:230338944 synonymous SNV . 0 24 hm5C_associated_SNPs_89012 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:230338919-230338945
64251 chrX 153609278 153609278 1 + G A CESC 153609275 + 153609255 153609295 41 TACGGCCGGGACAGTGCCTACCAGAGCATCACGCACTACCG TACGGCCGGGACAGTGCCTACCAAAGCATCACGCACTACCG < 41bp 0.809717400487334 0.598736532338871 0.9318658 0.29855162 prediction 0.421961736296925 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153609275 chrX:153609278 synonymous SNV . 0 24 hm5C_associated_SNPs_89013 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153609243-153609278
64251 chr12 52369228 52369228 1 + C T UCEC 52369225 + 52369205 52369245 41 ACTGCCTGAGCTCGGAGGACCTGCGCAACACCCACTGCTGC ACTGCCTGAGCTCGGAGGACCTGTGCAACACCCACTGCTGC < 41bp 0.710977255307629 0.496013855929078 0.46634263 0.3009821 prediction 0.421954510615258 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52369225 chr12:52369228 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_89016 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:52369204-52369229
64251 chr17 42266499 42266499 1 + T C STAD 42266498 + 42266478 42266518 41 GTGGTGGTGCTGATTCTAGCCTTGGTCCTAGCTTGGCTCTC GTGGTGGTGCTGATTCTAGCCCTGGTCCTAGCTTGGCTCTC < 41bp 0.787430524171422 0.576457480827416 0.23994562 0.3362707 prediction 0.421946086688013 Functional Loss - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266498 chr17:42266499 synonymous SNV . 0 22 hm5C_associated_SNPs_89019 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr17:42266455-42266508
64251 chr2 242105761 242105761 1 + C T HNSC 242105758 + 242105738 242105778 41 TCTCCCTCTTGCAGAGCAACCGGCTGACCAAGATCGAGGGT TCTCCCTCTTGCAGAGCAACCGGTTGACCAAGATCGAGGGT < 41bp 0.726526102815187 0.515560722406389 0.82860804 0.46943244 prediction 0.421930760817596 Functional Loss - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242105758 chr2:242105761 synonymous SNV . 0 24 hm5C_associated_SNPs_89022 0 0 1 SF3B4 POSTAR2 ENCODE chr2:242105716-242105786
64251 chr11 74545807 74545807 1 + G A UCEC 74545804 + 74545784 74545824 41 GAGCAGAGTCAGAGCAGTTCCAGGCAACAAAGCCAAGGTAC GAGCAGAGTCAGAGCAGTTCCAGACAACAAAGCCAAGGTAC < 41bp 0.710960790590368 0.458371849436856 0.85140425 0.35406417 prediction 0.421921581180736 Functional Loss - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74545804 chr11:74545807 nonsynonymous SNV 0.864 0 24 hm5C_associated_SNPs_89024 0 0 2 PRPF8 POSTAR2 ENCODE chr11:74545750-74545870
64251 chr11 134237201 134237201 1 + G A rs7945169 134237198 + 134237178 134237218 41 TACTGGACGGGGTGGTTTGACTCGTGGGGAGGCCCTCACAA TACTGGACGGGGTGGTTTGACTCATGGGGAGGCCCTCACAA < 41bp 0.819278473642879 0.608319209940597 0.13617077 0.14013004 prediction 0.421918527404563 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134237198 chr11:134237201 synonymous SNV . 0 24 hm5C_associated_SNPs_89026 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:134237200-134237201
64251 chr19 1422352 1422352 1 + G A UCEC 1422349 + 1422329 1422369 41 GCCACCCTCTCCTTCCAGGTCACGGAGGTAGTCATGATCTA GCCACCCTCTCCTTCCAGGTCACAGAGGTAGTCATGATCTA < 41bp 0.810283960326517 0.599326028229726 0.38711137 0.16988707 prediction 0.421915864193583 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1422349 chr19:1422352 synonymous SNV . 0 24 hm5C_associated_SNPs_89029 0 0 25 SRSF1 POSTAR2 GSE83923,GSM2221665 chr19:1422340-1422360
64251 chr7 106509059 106509059 1 + C T GBM 106509056 + 106509036 106509076 41 AAGGACCACGAGAGTGTGTTCACCGTGTCCCTGTGGGACTG AAGGACCACGAGAGTGTGTTCACTGTGTCCCTGTGGGACTG < 41bp 0.773173000465129 0.562221501129003 0.05690661 0.04453042 prediction 0.421902998672252 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509056 chr7:106509059 synonymous SNV . 0 24 hm5C_associated_SNPs_89030 0 0 2 FMR1 POSTAR2 ENCODE chr7:106509031-106509074
64251 chr21 45502758 45502758 1 + G T COAD 45502754 + 45502734 45502774 41 AATGCCGTGGTCCACGTGGGCGGCGTTTTGTGCGTTGAGAT AATGCCGTGGTCCACGTGGGCGGCTTTTTGTGCGTTGAGAT < 41bp 0.710950465275296 0.497671409024188 0.23917955 0.14081478 prediction 0.421900930550593 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45502754 chr21:45502758 nonsynonymous SNV 0.076 1 25 hm5C_associated_SNPs_89033 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:45502742-45502770
64251 chr22 31796663 31796663 1 + C T BLCA 31796661 + 31796641 31796681 41 CCACTTAGGGCTGCTTAAGGCTCGTCTTGCTAAGCTTCGTC CCACTTAGGGCTGCTTAAGGCTTGTCTTGCTAAGCTTCGTC < 41bp 0.710950240691313 0.421341943847521 0.20327386 0.18386948 prediction 0.421900481382625 Functional Loss - DRG1 ENSG00000185721 CDS Human protein_coding chr22:31796661 chr22:31796663 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_89034 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:31796642-31796666
64251 chr22 31796664 31796664 1 + G A UCEC 31796661 + 31796641 31796681 41 CCACTTAGGGCTGCTTAAGGCTCGTCTTGCTAAGCTTCGTC CCACTTAGGGCTGCTTAAGGCTCATCTTGCTAAGCTTCGTC < 41bp 0.710950240691313 0.469125487543593 0.20327386 0.094466835 prediction 0.421900481382625 Functional Loss - DRG1 ENSG00000185721 CDS Human protein_coding chr22:31796661 chr22:31796664 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_89035 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:31796642-31796666
64251 chr6 76369055 76369055 1 + C T UCEC 76369052 + 76369032 76369072 41 AGAGGAAAGTACAACAGAAACGACACTGTAGTACCTATCAG AGAGGAAAGTACAACAGAAACGATACTGTAGTACCTATCAG < 41bp 0.751056745871814 0.540107038657566 0.2184945 0.26788446 prediction 0.421899414428496 Functional Loss - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76369052 chr6:76369055 nonsynonymous SNV 0.956 1 24 hm5C_associated_SNPs_89036 0 0 6 GRWD1 POSTAR2 ENCODE chr6:76369047-76369106
64251 chr11 64789222 64789222 1 + C T rs61736632 64789220 + 64789200 64789240 41 AGCTGGACTCCATCCGCAGCCACCACTGGTGCATCCAGGGC AGCTGGACTCCATCCGCAGCCATCACTGGTGCATCCAGGGC < 41bp 0.710942008758101 0.445405305044716 0.14381754 0.16350603 prediction 0.421884017516202 Functional Loss - ARL2 ENSG00000213465 CDS Human protein_coding chr11:64789220 chr11:64789222 synonymous SNV . 0 23 hm5C_associated_SNPs_89044 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:64789216-64789250
64251 chrX 70612495 70612495 1 + G A UCEC 70612492 + 70612472 70612512 41 CAAGTGTCTGCTAGAGGTGACTGGGGTGGCAGATCCCACGG CAAGTGTCTGCTAGAGGTGACTGAGGTGGCAGATCCCACGG < 41bp 0.789729127075268 0.578789626952093 0.89297837 0.78942394 prediction 0.421879000246351 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70612492 chrX:70612495 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_89047 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chrX:70612487-70612499
64251 chr16 9185540 9185540 1 + G T rs114352580 9185538 + 9185518 9185558 41 GCTCCGCGGTGCAGGCCGAGCTGCGCGGAGGGCTCGGCGAT GCTCCGCGGTGCAGGCCGAGCTTCGCGGAGGGCTCGGCGAT < 41bp 0.897164571211766 0.686229812235001 0.68889207 0.5959961 prediction 0.421869517953528 Functional Loss - C16orf72 ENSG00000182831 UTR5 Human protein_coding chr16:9185538 chr16:9185540 . . 0 23 hm5C_associated_SNPs_89054 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:9185504-9185540
64251 chr14 76965096 76965096 1 + G T LUAD 76965093 + 76965073 76965113 41 GGGCCAGGGCTGACTCCCTTCAGGAGTGGAGGCCACTGGAG GGGCCAGGGCTGACTCCCTTCAGTAGTGGAGGCCACTGGAG < 41bp 0.935254642631946 0.724323417912845 0.8990959 0.31056362 prediction 0.421862449438202 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76965093 chr14:76965096 stopgain . 0 24 hm5C_associated_SNPs_89057 0 0 3 U2AF2 POSTAR2 ENCODE chr14:76965043-76965109
64251 chr19 47858343 47858343 1 + G A rs139356591 47858340 + 47858320 47858360 41 AGCACACGTTCGGCGGCCACCAAGATTGTATTCCTGACAGT AGCACACGTTCGGCGGCCACCAAAATTGTATTCCTGACAGT < 41bp 0.81651738059341 0.605588040635826 0.17154518 0.20328316 prediction 0.421858679915168 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858340 chr19:47858343 synonymous SNV . 0 24 hm5C_associated_SNPs_89058 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:47858324-47858377
64251 chr7 90042338 90042338 1 + G A rs34378679 90042335 + 90042315 90042355 41 TGCAACACTGCCTTCAGGTCCTCGGTGCCCAACATCAAACT TGCAACACTGCCTTCAGGTCCTCAGTGCCCAACATCAAACT < 41bp 0.797449748491366 0.586525016586907 0.058451533 0.09150523 prediction 0.421849463808918 Functional Loss - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042335 chr7:90042338 synonymous SNV . 0 24 hm5C_associated_SNPs_89064 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:90042296-90042344
64251 chrX 48759601 48759601 1 + C T SARC 48759599 + 48759579 48759619 41 ATGAGAAACTAGACAGGGGCCACGACAAGTCAGACCGGGGC ATGAGAAACTAGACAGGGGCCATGACAAGTCAGACCGGGGC < 41bp 0.803972987960986 0.59305551040055 0.053359598 0.08548924 prediction 0.421834955120871 Functional Loss - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759599 chrX:48759601 synonymous SNV . 0 23 hm5C_associated_SNPs_89068 0 0 1 UCHL5 POSTAR2 ENCODE chrX:48759569-48759644
64251 chr16 85708012 85708012 1 + C T rs561988165 85708010 + 85707990 85708030 41 CAGAAGCAGCTGGAAGAGAACTCGAGGGGCTGTGCTGCAGG CAGAAGCAGCTGGAAGAGAACTTGAGGGGCTGTGCTGCAGG < 41bp 0.800464715818939 0.589547721887692 0.63146496 0.22998708 prediction 0.421833987862494 Functional Loss - GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85708010 chr16:85708012 . . 0 23 hm5C_associated_SNPs_89071 0 0 1 CSTF2 POSTAR2 ENCODE chr16:85707953-85708020
64251 chr10 126172763 126172763 1 + C T COAD 126172761 + 126172741 126172781 41 CACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGGGGC CACCAACGAGTCGCAGAAGTCCTGGGCAGAGCTGGTGGGGC < 41bp 0.710916982922443 0.429674134122004 0.713563 0.50672984 prediction 0.421833965844886 Functional Loss - LHPP ENSG00000107902 CDS Human protein_coding chr10:126172761 chr10:126172763 nonsynonymous SNV 0.031 3 23 hm5C_associated_SNPs_89072 0 0 1 PPIG POSTAR2 ENCODE chr10:126172728-126172831
64251 chr21 44182312 44182312 1 + C T LUSC 44182310 + 44182290 44182330 41 GAGCCTGAGTGCAACATCTTCTCCAACATCCCACCTGATGG GAGCCTGAGTGCAACATCTTCTTCAACATCCCACCTGATGG < 41bp 0.832335055973743 0.621428148625245 0.95101976 0.037392706 prediction 0.421813814696996 Functional Loss - PDE9A ENSG00000160191 CDS Human protein_coding chr21:44182310 chr21:44182312 nonsynonymous SNV 0.859 1 23 hm5C_associated_SNPs_89082 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:44182301-44182326
64251 chr3 58109178 58109178 1 + G A SKCM 58109175 + 58109155 58109195 41 TAGCGTCGACTGCTCGGAAGCGGGACCGGGGGCCCTGGGCC TAGCGTCGACTGCTCGGAAGCGGAACCGGGGGCCCTGGGCC < 41bp 0.80149510007453 0.59059027098032 0.9309268 0.93184793 prediction 0.421809658188421 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58109175 chr3:58109178 nonsynonymous SNV 0.218 4 24 hm5C_associated_SNPs_89087 0 0 10 EIF3H POSTAR2 ENCODE chr3:58109143-58109209
64251 chr6 43413455 43413455 1 + C T LGG 43413453 + 43413433 43413473 41 CTCAACATCCTCCTGGCCAACGCGGCAGGCCTGCTGGGGCT CTCAACATCCTCCTGGCCAACGTGGCAGGCCTGCTGGGGCT < 41bp 0.836696254766583 0.625793193617827 0.83239555 0.7335477 prediction 0.421806122297512 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43413453 chr6:43413455 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_89089 0 0 1 RPS3 POSTAR2 ENCODE chr6:43413420-43413534
64251 chr2 224824312 224824312 1 + G A UCEC 224824309 + 224824289 224824329 41 AAGCTTTTGGACATCGGTTACAGGAAAACTTTTCCTTAGAT AAGCTTTTGGACATCGGTTACAGAAAAACTTTTCCTTAGAT < 41bp 0.763488875503248 0.552588242352331 0.6402348 0.2275691 prediction 0.421801266301834 Functional Loss - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824309 chr2:224824312 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_89091 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:224824253-224824313
64251 chr10 75525908 75525908 1 + G T LGG 75525906 + 75525886 75525926 41 GACGTCTCCTACAATGCCATCAGGACTGGTCTTGTTAGGCT GACGTCTCCTACAATGCCATCATGACTGGTCTTGTTAGGCT < 41bp 0.71089583499631 0.365650932824813 0.22943375 0.06213966 prediction 0.421791669992619 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75525906 chr10:75525908 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_89094 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:75525873-75525908
64251 chr7 98249051 98249051 1 + C T SKCM 98249048 + 98249028 98249068 41 GGGAGCTGGAGAGGCAGCTTCTGCGCAAGGTGGCAGAGCTG GGGAGCTGGAGAGGCAGCTTCTGTGCAAGGTGGCAGAGCTG < 41bp 0.752637067092253 0.541747472914065 0.4430349 0.4063236 prediction 0.421779188356376 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98249048 chr7:98249051 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_89099 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:98249006-98249054
64251 chrX 129058844 129058844 1 + G A SKCM 129058841 + 129058821 129058861 41 TTGAAGGAAAACCATCAGTCCAGGAAGCAAAAAGCAAGTTC TTGAAGGAAAACCATCAGTCCAGAAAGCAAAAAGCAAGTTC < 41bp 0.795321855641444 0.584434807155947 0.15951273 0.2045975 prediction 0.421774096970994 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129058841 chrX:129058844 synonymous SNV . 0 24 hm5C_associated_SNPs_89102 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:129058827-129058854
64251 chr14 105995686 105995686 1 + G A COAD 105995683 + 105995663 105995703 41 GGCCAGCCTGTGGGAGCCGCCGCGCTCCGGGCTGCCGCTGT GGCCAGCCTGTGGGAGCCGCCGCACTCCGGGCTGCCGCTGT < 41bp 0.801099357617457 0.590216990237161 0.35330567 0.48085156 prediction 0.421764734760592 Functional Loss - TMEM121 ENSG00000184986 CDS Human protein_coding chr14:105995683 chr14:105995686 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_89104 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:105995686-105995708
64251 chr1 146650972 146650972 1 + T C rs587707048 146650971 + 146650951 146650991 41 GCGAGAAGCTCAGCAAAGACCTGAATATCGTCATAGCCAAG GCGAGAAGCTCAGCAAAGACCCGAATATCGTCATAGCCAAG < 41bp 0.7708745622175 0.559996873766923 0.11887416 0.08600375 prediction 0.421755376901155 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650971 chr1:146650972 . . 0 22 hm5C_associated_SNPs_89106 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704218 chr1:146650961-146650982
64251 chr6 33424243 33424243 1 + C T LUAD 33424240 + 33424220 33424260 41 GAGTCCATGCCTGTTTTCTCCGCCACCGGGACCTATGCAAG GAGTCCATGCCTGTTTTCTCCGCTACCGGGACCTATGCAAG < 41bp 0.742452857075593 0.531581532001798 0.2875514 0.18837783 prediction 0.42174265014759 Functional Loss - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33424240 chr6:33424243 nonsynonymous SNV 0.984 3 24 hm5C_associated_SNPs_89107 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:33424228-33424252
64251 chr11 605710 605710 1 + C T COAD 605707 + 605687 605727 41 CAGCCCGTGGCCAGGCCCGTCTCCGTGGGGCTTTCCAGGTG CAGCCCGTGGCCAGGCCCGTCTCTGTGGGGCTTTCCAGGTG < 41bp 0.710866671419422 0.495108375827242 0.904625 0.37477964 prediction 0.421733342838843 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605707 chr11:605710 synonymous SNV . 0 24 hm5C_associated_SNPs_89113 0 0 2 PRPF8 POSTAR2 ENCODE chr11:605683-605773
64251 chr2 239237694 239237694 1 + G T LIHC 239237692 + 239237672 239237712 41 GAGAAGGCCAAGGAGAATGGCGGAAACAGACACAGAGAAGG GAGAAGGCCAAGGAGAATGGCGTAAACAGACACAGAGAAGG < 41bp 0.710865785666268 0.376726084769113 0.41611582 0.16568565 prediction 0.421731571332537 Functional Loss - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239237692 chr2:239237694 nonsynonymous SNV 0.011 0 23 hm5C_associated_SNPs_89115 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:239237688-239237709
64251 chr1 57175860 57175860 1 + G T rs559361613 57175858 + 57175838 57175878 41 AATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTATTAT AATTTCCTCCAGTGAAGACACGTGAGAAGAGCTTCTATTAT < 41bp 0.710857514262221 0.408154568987103 0.6411249 0.11385435 prediction 0.421715028524442 Functional Loss - PRKAA2 ENSG00000162409 UTR3 Human protein_coding chr1:57175858 chr1:57175860 . . 0 23 hm5C_associated_SNPs_89121 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:57175816-57175862
64251 chr17 73267476 73267476 1 + G A rs116789032 73267473 + 73267453 73267493 41 CGCAAGCGGAACTCGCTTGGCTCGTCACCCCTTCACCCGGT CGCAAGCGGAACTCGCTTGGCTCATCACCCCTTCACCCGGT < 41bp 0.793939703383172 0.583086845344489 0.17281714 0.32497457 prediction 0.421705716077367 Functional Loss - LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73267473 chr17:73267476 . . 0 24 hm5C_associated_SNPs_89126 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:73267476-73267505
64251 chr10 8006411 8006411 1 + G A PRAD 8006408 + 8006388 8006428 41 ATCCAAAGAAAAGAAATCACCTGGACGTTCCAAGAGCCCCA ATCCAAAGAAAAGAAATCACCTGAACGTTCCAAGAGCCCCA < 41bp 0.773102245333712 0.562253152009921 0.38706747 0.35434413 prediction 0.421698186647582 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006408 chr10:8006411 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_89129 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr10:8006401-8006427
64251 chr22 50962225 50962225 1 + G A UCEC 50962222 + 50962202 50962242 41 GGGGCCTGCATTGTAGTACACGCGGTAACTGTGACTAGCCT GGGGCCTGCATTGTAGTACACGCAGTAACTGTGACTAGCCT < 41bp 0.803037802116026 0.592196877515203 0.37822384 0.15750319 prediction 0.421681849201646 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962222 chr22:50962225 nonsynonymous SNV 0.585 5 24 hm5C_associated_SNPs_89135 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50962198-50962249
64251 chr5 6753016 6753016 1 + G A LUAD 6753013 + 6752993 6753033 41 TTACTATACCTCCACCGACCCTAGGGGTTGCTCCTGTTCCT TTACTATACCTCCACCGACCCTAAGGGTTGCTCCTGTTCCT < 41bp 0.710834488859545 0.456636592252529 0.15606004 0.02486968 prediction 0.42166897771909 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6753013 chr5:6753016 nonsynonymous SNV 0.903 2 24 hm5C_associated_SNPs_89143 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr5:6752991-6753016
64251 chr3 10168864 10168864 1 + A C rs3894320 10168860 + 10168840 10168880 41 TTAAACTCCAATAAAACATACAGCATTGAATCAGACATGAT TTAAACTCCAATAAAACATACAGCCTTGAATCAGACATGAT < 41bp 0.710831153178534 0.382112110025945 0.007020414 0.006638229 prediction 0.421662306357069 Functional Loss - BRK1 ENSG00000254999 UTR3 Human protein_coding chr3:10168860 chr3:10168864 . . 0 25 hm5C_associated_SNPs_89147 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:10168766-10168866
64251 chr1 15978270 15978270 1 + G A CESC 15978267 + 15978247 15978287 41 GCTCCCAGACCACCTTTCTTCCTGAGGGAGAGCTACCAGAG GCTCCCAGACCACCTTTCTTCCTAAGGGAGAGCTACCAGAG < 41bp 0.710830743949523 0.467661026353826 0.2866553 0.17880979 prediction 0.421661487899045 Functional Loss - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978267 chr1:15978270 nonsynonymous SNV 0.952 3 24 hm5C_associated_SNPs_89149 0 0 2 GRWD1 POSTAR2 ENCODE chr1:15978202-15978312
64251 chr8 67976717 67976717 1 + A T LIHC 67976713 + 67976693 67976733 41 GCACTGTGTGTCTCCCCGGACGCGAGCCCGCTCCCCTGAGT GCACTGTGTGTCTCCCCGGACGCGTGCCCGCTCCCCTGAGT < 41bp 0.877524887899179 0.66670167540136 0.3244633 0.21864808 prediction 0.421646424995637 Functional Loss - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:67976713 chr8:67976717 synonymous SNV . 0 25 hm5C_associated_SNPs_89152 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:67976689-67976728
64251 chr13 92005164 92005164 1 + A T rs147589850 92005160 + 92005140 92005180 41 ATTACCTGAGGTCAGGAGTTCGAGACCAACCTGGCCGACAT ATTACCTGAGGTCAGGAGTTCGAGTCCAACCTGGCCGACAT < 41bp 0.844300993054318 0.633479517354483 0.895496 0.6770037 prediction 0.421642951399671 Functional Loss - MIR17HG ENSG00000215417 ncRNA_intronic Human processed_transcript chr13:92005160 chr13:92005164 . . 0 25 hm5C_associated_SNPs_89153 0 0 5 HNRNPA1 POSTAR2 GSE83923,GSM2221653 chr13:92005140-92005180
64251 chr21 45507714 45507714 1 + G A UCEC 45507711 + 45507691 45507731 41 CTTTACCTTCAGCCCCAGCACTCGGAGGGGAGAGTGACATG CTTTACCTTCAGCCCCAGCACTCAGAGGGGAGAGTGACATG < 41bp 0.807187391309791 0.596366273258646 0.31370038 0.13994667 prediction 0.421642236102289 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45507711 chr21:45507714 nonsynonymous SNV 0.020 0 24 hm5C_associated_SNPs_89154 0 0 3 DDX24 POSTAR2 ENCODE chr21:45507639-45507776
64251 chr4 184367704 184367704 1 + G T STAD 184367701 + 184367681 184367721 41 TCTCAAAGCAGCTCAGAGATCGAGGTGCCCTTGTTGGGCTC TCTCAAAGCAGCTCAGAGATCGATGTGCCCTTGTTGGGCTC < 41bp 0.926736205697339 0.715915822243064 0.9422245 0.34851664 prediction 0.42164076690855 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367701 chr4:184367704 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_89155 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:184367681-184367711
64251 chr22 44385028 44385028 1 + C T COAD 44385025 + 44385005 44385045 41 GGAGAAGCGTACTGGGCCGGCGGCCTGCACCTCTACACCCC GGAGAAGCGTACTGGGCCGGCGGTCTGCACCTCTACACCCC < 41bp 0.718044888515648 0.50724020163239 0.15259582 0.1342969 prediction 0.421609373766515 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44385025 chr22:44385028 synonymous SNV . 0 24 hm5C_associated_SNPs_89163 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:44384998-44385034
64251 chr12 863177 863177 1 + C T rs34880640 863175 + 863155 863195 41 GCCCCTGGGGAACAGGCCGTCGCGGGCCCTGCCCCCTCGAC GCCCCTGGGGAACAGGCCGTCGTGGGCCCTGCCCCCTCGAC < 41bp 0.738360432543109 0.52755687634115 0.8905128 0.8458279 prediction 0.421607112403919 Functional Loss - WNK1 ENSG00000060237 CDS Human protein_coding chr12:863175 chr12:863177 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_89164 2 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:863167-863193
64251 chr20 307338 307338 1 + G A SARC 307335 + 307315 307355 41 GGAGTCGCTGGGCTTTCTGTCCAGGCTGCCCCCTGGCCCGG GGAGTCGCTGGGCTTTCTGTCCAAGCTGCCCCCTGGCCCGG < 41bp 0.710802406677267 0.454435171544557 0.91575 0.8481978 prediction 0.421604813354534 Functional Loss - SOX12 ENSG00000177732 CDS Human protein_coding chr20:307335 chr20:307338 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_89165 0 0 12 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:307320-307340
64251 chr1 28176633 28176633 1 + G T rs35775135 28176631 + 28176611 28176651 41 GTGTGGAGGGCCCTGGCTCCCTGGGCCTGGAGGAATCAGGG GTGTGGAGGGCCCTGGCTCCCTTGGCCTGGAGGAATCAGGG < 41bp 0.911058539471325 0.700265001308362 0.35871935 0.09561315 prediction 0.421587076325926 Functional Loss - PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176631 chr1:28176633 synonymous SNV . 0 23 hm5C_associated_SNPs_89170 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:28176606-28176638
64251 chr19 5110734 5110734 1 + G A COAD 5110731 + 5110711 5110751 41 TGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCG TGGAAGCAGGGCAAGGACCTCACAGTGCTGGACCACACGCG < 41bp 0.820147021327286 0.609369890626635 0.88342977 0.81214046 prediction 0.421554261401302 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5110731 chr19:5110734 synonymous SNV . 0 24 hm5C_associated_SNPs_89176 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:5110726-5110744
64251 chr12 4702268 4702268 1 + C T UCEC 4702266 + 4702246 4702286 41 TGGGTCTTGAAGCCAAGAAGCTCGACACGGCTCCTGAGAAA TGGGTCTTGAAGCCAAGAAGCTTGACACGGCTCCTGAGAAA < 41bp 0.875490368050762 0.664717642953862 0.50621957 0.42765835 prediction 0.4215454501938 Functional Loss - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4702266 chr12:4702268 synonymous SNV . 0 23 hm5C_associated_SNPs_89178 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:4702263-4702292
64251 chr7 42972109 42972109 1 + C T UCEC 42972107 + 42972087 42972127 41 CCGGCCGGGCTTTCCCAGTCCTCCGTGGGGTAGGTAAAGAA CCGGCCGGGCTTTCCCAGTCCTTCGTGGGGTAGGTAAAGAA < 41bp 0.81247447083233 0.601706260456214 0.08595878 0.04150182 prediction 0.421536420752232 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42972107 chr7:42972109 nonsynonymous SNV 0.416 0 23 hm5C_associated_SNPs_89183 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr7:42972086-42972116
64251 chr7 31125054 31125054 1 + C T LUAD 31125051 + 31125031 31125071 41 GACAGCAACCACTGCTTCATCTCCACTGTGAGTGAGCCAAG GACAGCAACCACTGCTTCATCTCTACTGTGAGTGAGCCAAG < 41bp 0.789995925050408 0.57923028403032 0.83236027 0.06740108 prediction 0.421531282040176 Functional Loss - ADCYAP1R1 ENSG00000078549 CDS Human protein_coding chr7:31125051 chr7:31125054 synonymous SNV . 0 24 hm5C_associated_SNPs_89184 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:31125018-31125058
64251 chr1 53308575 53308575 1 + C T UCEC 53308573 + 53308553 53308593 41 GCCATGGTTCATTTCTTGCACCCGGGCCACACGCCCCGGAA GCCATGGTTCATTTCTTGCACCTGGGCCACACGCCCCGGAA < 41bp 0.710762958191072 0.478140367372181 0.4778928 0.666906 prediction 0.421525916382143 Functional Loss - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53308573 chr1:53308575 nonsynonymous SNV 0.016 1 23 hm5C_associated_SNPs_89187 0 0 4 DDX3X POSTAR2 ENCODE chr1:53308507-53308625
64251 chr10 131506192 131506192 1 + C T rs1803965 131506190 + 131506170 131506210 41 TCCCAGCCCCCGCTGCGGTTCTCGGAGGTCCGGAGCCCCTG TCCCAGCCCCCGCTGCGGTTCTTGGAGGTCCGGAGCCCCTG < 41bp 0.839368817839895 0.628610570973119 0.41931066 0.28640085 prediction 0.421516493733552 Functional Loss - MGMT ENSG00000170430 CDS Human protein_coding chr10:131506190 chr10:131506192 synonymous SNV . 0 23 hm5C_associated_SNPs_89191 0 0 1 RPS3 POSTAR2 ENCODE chr10:131506157-131506224
64251 chr10 91163429 91163429 1 + T C LIHC 91163428 + 91163408 91163448 41 ACTATGAGCGGGCCCTGAGACTGGCTGCTGACTTTGAGAAC ACTATGAGCGGGCCCTGAGACCGGCTGCTGACTTTGAGAAC < 41bp 0.710756027002645 0.482611439741377 0.1743586 0.38346237 prediction 0.421512054005289 Functional Loss - IFIT1 ENSG00000185745 CDS Human protein_coding chr10:91163428 chr10:91163429 nonsynonymous SNV 0.053 3 22 hm5C_associated_SNPs_89193 0 0 2 HNRNPD POSTAR2 GSE52971,GSM1279666 chr10:91163380-91163440
64251 chr12 19436440 19436440 1 + C T PRAD 19436437 + 19436417 19436457 41 TGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAAC TGTGGCAGCTCTACGAATGGCAGTAGCGTCAGTTTTATAAC < 41bp 0.71075364029116 0.494874982377009 0.2868377 0.16959316 prediction 0.421507280582321 Functional Loss - PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19436437 chr12:19436440 stopgain 1.000 1 24 hm5C_associated_SNPs_89194 0 0 1 UCHL5 POSTAR2 ENCODE chr12:19436317-19436457
64251 chr2 97020046 97020046 1 + C T UCEC 97020043 + 97020023 97020063 41 CTGGGGGATGACTTTGATGCCAACGATGAACCTGACCACAC CTGGGGGATGACTTTGATGCCAATGATGAACCTGACCACAC < 41bp 0.736988429302376 0.526237668535657 0.08316755 0.21763375 prediction 0.421501521533439 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97020043 chr2:97020046 synonymous SNV . 0 24 hm5C_associated_SNPs_89195 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:97020015-97020049
64251 chr11 43702421 43702421 1 + G T SARC 43702419 + 43702399 43702439 41 GCCGGCTTCCTGTACTGGGTCGGCGCGGGCACCGTGGCCTA GCCGGCTTCCTGTACTGGGTCGTCGCGGGCACCGTGGCCTA < 41bp 0.912263078322365 0.701513203798852 0.6846724 0.47586074 prediction 0.421499749047025 Functional Loss - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43702419 chr11:43702421 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_89197 0 0 7 DDX3X POSTAR2 ENCODE chr11:43702365-43702450
64251 chr15 89843172 89843172 1 + G A SKCM 89843169 + 89843149 89843189 41 GTGCAACAGTTCTATCAGCCCAAGATTCAGCAGTTTCTCAG GTGCAACAGTTCTATCAGCCCAAAATTCAGCAGTTTCTCAG < 41bp 0.710743169269864 0.478979804565387 0.5696883 0.35105303 prediction 0.421486338539728 Functional Loss - FANCI ENSG00000140525 CDS Human protein_coding chr15:89843169 chr15:89843172 synonymous SNV . 0 24 hm5C_associated_SNPs_89202 0 0 3 UCHL5 POSTAR2 ENCODE chr15:89843153-89843197
64251 chr6 127588024 127588024 1 + G A rs534154150 127588021 + 127588001 127588041 41 TTCCCGGCAGCTGCGGGCTCCGAGGCCAGAGAGAAAAGACT TTCCCGGCAGCTGCGGGCTCCGAAGCCAGAGAGAAAAGACT < 41bp 0.740366208739101 0.529626911352712 0.7739918 0.29360944 prediction 0.421478594772778 Functional Loss - RNF146 ENSG00000118518 UTR5 Human protein_coding chr6:127588021 chr6:127588024 . . 0 24 hm5C_associated_SNPs_89203 0 0 2 NCBP2 POSTAR2 ENCODE chr6:127588015-127588137
64251 chr11 70253677 70253677 1 + C T rs142633573 70253674 + 70253654 70253694 41 GGTGCCAAGACGGTGCAGGGCTCCGGGCACCAGGAGCATAT GGTGCCAAGACGGTGCAGGGCTCTGGGCACCAGGAGCATAT < 41bp 0.757395111665539 0.546659158349764 0.15586627 0.14571619 prediction 0.421471906631549 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70253674 chr11:70253677 synonymous SNV . 0 24 hm5C_associated_SNPs_89205 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:70253659-70253684
64251 chr2 202151199 202151199 1 + C T HNSC 202151197 + 202151177 202151217 41 TTCAGAGGCGATGATATTCTCACCATCCTGACTGAAGTGAA TTCAGAGGCGATGATATTCTCATCATCCTGACTGAAGTGAA < 41bp 0.710730999678998 0.469031477769692 0.18412435 0.16171542 prediction 0.421461999357996 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202151197 chr2:202151199 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_89207 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr2:202151163-202151207
64251 chr1 227152972 227152972 1 + G T UCEC 227152969 + 227152949 227152989 41 CGGGAGGCTCTTTGCAAACCCCAGAGACTCATTCTCTGCCA CGGGAGGCTCTTTGCAAACCCCATAGACTCATTCTCTGCCA < 41bp 0.710730350101124 0.313938939532247 0.3685032 0.15857175 prediction 0.421460700202249 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227152969 chr1:227152972 nonsynonymous SNV 0.024 0 24 hm5C_associated_SNPs_89208 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:227152972-227153022
64251 chr19 50154181 50154181 1 + A C LIHC 50154180 + 50154160 50154200 41 GCCCGTCACCTCACCTTGGGCACGGGAGACGGGGGCCCTGC GCCCGTCACCTCACCTTGGGCCCGGGAGACGGGGGCCCTGC < 41bp 0.832323751778046 0.621594648177203 0.7218919 0.36515713 prediction 0.421458207201687 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154180 chr19:50154181 nonsynonymous SNV 0.985 2 22 hm5C_associated_SNPs_89209 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50154138-50154194
64251 chr11 17373438 17373438 1 + G C rs34000454 17373434 + 17373414 17373454 41 TCCGTCAACTCTTTACGCAACAGAGGTCTCCCCCTGCCCTT TCCGTCAACTCTTTACGCAACAGACGTCTCCCCCTGCCCTT < 41bp 0.710729001324396 0.446175479274182 0.9094336 0.82880306 prediction 0.421458002648793 Functional Loss - NCR3LG1 ENSG00000188211 UTR5 Human protein_coding chr11:17373434 chr11:17373438 . . 0 25 hm5C_associated_SNPs_89210 0 0 1 NCBP2 POSTAR2 ENCODE chr11:17373317-17373468
64251 chr12 132393334 132393334 1 + C T SKCM 132393331 + 132393311 132393351 41 TCCAACCCCGCCGGCCGCCGCGCCAACCCCAACAGCATCCG TCCAACCCCGCCGGCCGCCGCGCTAACCCCAACAGCATCCG < 41bp 0.710727092326256 0.49812011119487 0.22513428 0.24264205 prediction 0.421454184652511 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132393331 chr12:132393334 synonymous SNV . 0 24 hm5C_associated_SNPs_89212 0 0 1 BUD13 POSTAR2 ENCODE chr12:132393290-132393336
64251 chr2 177004029 177004029 1 + G A rs147397829 177004026 + 177004006 177004046 41 GCAGTGCGGCGGCCAGGCAGCCGGGTAGGGTATGCGGGGGC GCAGTGCGGCGGCCAGGCAGCCGAGTAGGGTATGCGGGGGC < 41bp 0.771967070309753 0.561240863726489 0.90476656 0.83229226 prediction 0.421452413166527 Functional Loss - HOXD-AS2;MIR10B ENSG00000128652 intronic Human protein_coding chr2:177004026 chr2:177004029 . . 0 24 hm5C_associated_SNPs_89213 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221667 chr2:177004020-177004040
64251 chrX 48339684 48339684 1 + A T LUAD 48339680 + 48339660 48339700 41 GTCTGTCCTGCCCACAGGCTCTGAACATTGCTACACATGTC GTCTGTCCTGCCCACAGGCTCTGATCATTGCTACACATGTC < 41bp 0.710723148133086 0.367213753727513 0.029333413 0.08325127 prediction 0.421446296266171 Functional Loss - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48339680 chrX:48339684 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_89215 0 0 4 EFTUD2 POSTAR2 ENCODE chrX:48339628-48339685
64251 chr1 210012310 210012310 1 + C T rs530246971 210012307 + 210012287 210012327 41 TTGCGGGTGGTGCAGCTCTTCATCAGCCTCCTCGAGGGTGA TTGCGGGTGGTGCAGCTCTTCATTAGCCTCCTCGAGGGTGA < 41bp 0.739569405339396 0.528850941590857 0.27118605 0.13844365 prediction 0.421436927497079 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012307 chr1:210012310 synonymous SNV . 0 24 hm5C_associated_SNPs_89217 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210012301-210012330
64251 chr2 63223825 63223825 1 + A T OV 63223821 + 63223801 63223841 41 GTATGTAGTAGGAGAATTGGCAGCACTAGAGAATGAGCAAA GTATGTAGTAGGAGAATTGGCAGCTCTAGAGAATGAGCAAA < 41bp 0.710718270397921 0.39178195424767 0.1883634 0.20217866 prediction 0.421436540795842 Functional Loss - EHBP1 ENSG00000115504 CDS Human protein_coding chr2:63223821 chr2:63223825 synonymous SNV . 0 25 hm5C_associated_SNPs_89218 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:63223792-63223838
64251 chr8 55055338 55055338 1 + G A KIRC 55055335 + 55055315 55055355 41 TACTACAGCCTTCTATGATCCAAGAAGTCTGGGTAAGTTTG TACTACAGCCTTCTATGATCCAAAAAGTCTGGGTAAGTTTG < 41bp 0.710711790163239 0.47445856042351 0.63423 0.120194465 prediction 0.421423580326479 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55055335 chr8:55055338 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_89222 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:55055315-55055338
64251 chr22 46725290 46725290 1 + G T CESC 46725287 + 46725267 46725307 41 GATATCAAACTGGAACCACTCGCGGTCACTCCAGATGCTGC GATATCAAACTGGAACCACTCGCTGTCACTCCAGATGCTGC < 41bp 0.710711174305611 0.316363404650424 0.41042286 0.019043803 prediction 0.421422348611222 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46725287 chr22:46725290 synonymous SNV . 0 24 hm5C_associated_SNPs_89225 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:46725262-46725294
64251 chr13 113803243 113803243 1 + G A UCEC 113803240 + 113803220 113803260 41 TCTGTCCCAGGGGACCGGAACACGGAGCAGGAGGAGGGCGG TCTGTCCCAGGGGACCGGAACACAGAGCAGGAGGAGGGCGG < 41bp 0.808097334792772 0.597397190377442 0.610177 0.1758278 prediction 0.421400288830658 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803240 chr13:113803243 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_89232 0 0 3 LIN28B POSTAR2 ENCODE chr13:113803229-113803312
64251 chr7 128484771 128484771 1 + C T SKCM 128484768 + 128484748 128484788 41 GTAGGCACCCCCGCGCCATTCTCCATCGACACCAAGGGGGC GTAGGCACCCCCGCGCCATTCTCTATCGACACCAAGGGGGC < 41bp 0.751152831303871 0.540455032001726 0.96153045 0.93476206 prediction 0.42139559860429 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128484768 chr7:128484771 synonymous SNV . 0 24 hm5C_associated_SNPs_89234 0 0 1 SERBP1 POSTAR2 ENCODE chr7:128484740-128484771
64251 chr11 63663075 63663075 1 + G T UCEC 63663072 + 63663052 63663092 41 GTAGCTGTGAAGATCATTGACAAGACTCAACTGAACTCCTC GTAGCTGTGAAGATCATTGACAATACTCAACTGAACTCCTC < 41bp 0.710688474851218 0.310855064867922 0.79533505 0.35216153 prediction 0.421376949702437 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63663072 chr11:63663075 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89243 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63663065-63663103
64251 chr14 68046542 68046542 1 + G A rs114429668 68046539 + 68046519 68046559 41 CACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAG CACTCTGGCTTTGCCCTCTTCACAGACGATCCCTCGGGCAG < 41bp 0.814353371245945 0.603664920784965 0.80433035 0.32214832 prediction 0.421376900921959 Functional Loss - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68046539 chr14:68046542 synonymous SNV . 0 24 hm5C_associated_SNPs_89244 0 0 1 PRPF8 POSTAR2 ENCODE chr14:68046542-68046635
64251 chr10 43882617 43882617 1 - C A LUAD 43882620 - 43882600 43882640 41 GAGGCCTGGTGCCTACAGCACAGGCTACGGGGGCTACGAGG GAGGCCTGGTGCCTACAGCACAGTCTACGGGGGCTACGAGG < 41bp 0.710687613076555 0.294656869446225 0.5794012 0.18822387 prediction 0.421375226153111 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882620 chr10:43882617 nonsynonymous SNV 0.687 2 24 hm5C_associated_SNPs_89246 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:43882600-43882620
64251 chr16 67197138 67197138 1 + C T rs1106304 67197136 + 67197116 67197156 41 CCCTAGTGGGCAGCGTGGGTCCCGGCTCAGTGCTCGAGCTA CCCTAGTGGGCAGCGTGGGTCCTGGCTCAGTGCTCGAGCTA < 41bp 0.710686829299083 0.465717429738004 0.8067023 0.68167835 prediction 0.421373658598167 Functional Loss - FBXL8 ENSG00000135722 CDS Human protein_coding chr16:67197136 chr16:67197138 synonymous SNV . 0 23 hm5C_associated_SNPs_89247 0 0 6 DDX24 POSTAR2 ENCODE chr16:67197111-67197149
64251 chr16 1716165 1716165 1 + G A ESCA 1716162 + 1716142 1716182 41 AAGGTCCTTCCACCCCAGGCCACGAGTCACCTGGCCAGTAA AAGGTCCTTCCACCCCAGGCCACAAGTCACCTGGCCAGTAA < 41bp 0.710679146071199 0.461283777488845 0.4012068 0.35561147 prediction 0.421358292142398 Functional Loss - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1716162 chr16:1716165 synonymous SNV . 0 24 hm5C_associated_SNPs_89252 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:1716145-1716179
64251 chr15 57574736 57574736 1 + G A LUAD 57574733 + 57574713 57574753 41 AGAGCCGCCAACCACACTGCCAGGAACCCATCCTGGGCTTA AGAGCCGCCAACCACACTGCCAGAAACCCATCCTGGGCTTA < 41bp 0.720280509248091 0.509602114209539 0.82437325 0.52633196 prediction 0.421356790077104 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57574733 chr15:57574736 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89253 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:57574721-57574758
64251 chr22 44372002 44372002 1 + C T CESC 44372000 + 44371980 44372020 41 TGGCGAGAACTGGGCTGCCTCTCAAGGACGGCGTCATTTGC TGGCGAGAACTGGGCTGCCTCTTAAGGACGGCGTCATTTGC < 41bp 0.861758375906178 0.651085098281331 0.3620817 0.27878273 prediction 0.421346555249693 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44372000 chr22:44372002 nonsynonymous SNV 0.834 2 23 hm5C_associated_SNPs_89259 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:44371990-44372031
64251 chr1 26795504 26795504 1 + G C OV 26795500 + 26795480 26795520 41 AAGCCAGTGGGGACGCCCAGCTCCGAAGGACACGCTTGCAC AAGCCAGTGGGGACGCCCAGCTCCCAAGGACACGCTTGCAC < 41bp 0.710669994919378 0.430568052635652 0.23951015 0.03235376 prediction 0.421339989838756 Functional Loss - DHDDS ENSG00000117682 CDS Human protein_coding chr1:26795500 chr1:26795504 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_89261 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:26795488-26795526
64251 chr19 30936285 30936285 1 + G A SKCM 30936282 + 30936262 30936302 41 TCGACCCTTTAGAAAGCAGTCGGGATTTTTTGTCACACGGG TCGACCCTTTAGAAAGCAGTCGGAATTTTTTGTCACACGGG < 41bp 0.806713246360129 0.59604446076199 0.42691192 0.16353136 prediction 0.421337571196277 Functional Loss - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936282 chr19:30936285 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_89262 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936273-30936300
64251 chr19 7965228 7965228 1 + G T rs112260910 7965226 + 7965206 7965246 41 CAGTGTTCAGCCTGGGTGCGCTGCAGGAACTTGACCTCAAG CAGTGTTCAGCCTGGGTGCGCTTCAGGAACTTGACCTCAAG < 41bp 0.710667332598122 0.369704589005944 0.2576961 0.16755581 prediction 0.421334665196245 Functional Loss - LRRC8E ENSG00000171017;ENSG00000214248 CDS Human other chr19:7965226 chr19:7965228 stopgain . 0 23 hm5C_associated_SNPs_89264 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:7965221-7965258
64251 chr11 47600884 47600884 1 + G A BLCA 47600881 + 47600861 47600901 41 GGAGAGCGCCGGGGCCGACACGCGCCGTGAGTATGTGCGGG GGAGAGCGCCGGGGCCGACACGCACCGTGAGTATGTGCGGG < 41bp 0.823034449271084 0.61236958918004 0.15431264 0.05063802 prediction 0.42132972018209 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47600881 chr11:47600884 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_89268 0 0 8 DDX3X POSTAR2 ENCODE chr11:47600817-47600887
64251 chr11 65416779 65416779 1 + C T UCEC 65416776 + 65416756 65416796 41 TGTCGCTGCAGGAGCCTAGCCGGCGGGGGGCCCCAGATCCT TGTCGCTGCAGGAGCCTAGCCGGTGGGGGGCCCCAGATCCT < 41bp 0.728177230927447 0.51751707030018 0.8993103 0.776238 prediction 0.421320321254534 Functional Loss - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65416776 chr11:65416779 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89271 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:65416778-65416806
64251 chr22 20761063 20761063 1 + G A rs2228236 20761060 + 20761040 20761080 41 GAGCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCAT GAGCACCAGAGGCTGCACAGCGAAGGGAAGCCCTTGGCCAT < 41bp 0.825290011977677 0.614631667062954 0.93109936 0.74243623 prediction 0.421316689829447 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20761060 chr22:20761063 synonymous SNV . 0 24 hm5C_associated_SNPs_89273 0 0 1 RBM15 POSTAR2 ENCODE chr22:20760992-20761072
64251 chr5 169127118 169127118 1 + G T LUAD 169127116 + 169127096 169127136 41 CCACCGTGGTGGCCAGGAAGCTGGGATTCCCAGAGATCATC CCACCGTGGTGGCCAGGAAGCTTGGATTCCCAGAGATCATC < 41bp 0.710652523116634 0.389202364827478 0.7667419 0.13829675 prediction 0.421305046233268 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127116 chr5:169127118 synonymous SNV . 0 23 hm5C_associated_SNPs_89280 0 0 5 DDX24 POSTAR2 ENCODE chr5:169127072-169127141
64251 chr3 10191540 10191540 1 + T C KIRC 10191539 + 10191519 10191559 41 AGCCTGAGAATTACAGGAGACTGGACATCGTCAGGTCGCTC AGCCTGAGAATTACAGGAGACCGGACATCGTCAGGTCGCTC < 41bp 0.804449270074443 0.59380033718713 0.28305057 0.18877044 prediction 0.421297865774626 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10191539 chr3:10191540 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_89282 1 0 28 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr17 73269657 73269657 1 - C T UCEC 73269660 - 73269640 73269680 41 TGCTGCAAAAGGAAGGCGCCCTGGGCTTCTTCAAGGGCCTG TGCTGCAAAAGGAAGGCGCCCTGAGCTTCTTCAAGGGCCTG < 41bp 0.798555180924356 0.587912522377124 0.22152737 0.13470012 prediction 0.421285317094465 Functional Loss - SLC25A19 ENSG00000125454 CDS Human protein_coding chr17:73269660 chr17:73269657 nonsynonymous SNV 0.709 5 24 hm5C_associated_SNPs_89287 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73269645-73269662
64251 chr15 67636436 67636436 1 + C T READ 67636434 + 67636414 67636454 41 GATAGAACGAGGGCTGATTCCACCAACAGCAAGGATTACCT GATAGAACGAGGGCTGATTCCATCAACAGCAAGGATTACCT < 41bp 0.710640101405178 0.406521981302688 0.2751589 0.060142457 prediction 0.421280202810355 Functional Loss - IQCH ENSG00000103599 CDS Human protein_coding chr15:67636434 chr15:67636436 nonsynonymous SNV 0.946 1 23 hm5C_associated_SNPs_89288 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr15:67636414-67636444
64251 chr15 91029336 91029336 1 + C T UCEC 91029333 + 91029313 91029353 41 CACGAACTGCTGGACGACCTCGGCGAGGTGCCCACCATCGA CACGAACTGCTGGACGACCTCGGTGAGGTGCCCACCATCGA < 41bp 0.746993666745158 0.536354830043107 0.8589037 0.6811978 prediction 0.421277673404101 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91029333 chr15:91029336 synonymous SNV . 0 24 hm5C_associated_SNPs_89289 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91029334-91029372
64251 chr17 14205298 14205298 1 + G T UCEC 14205295 + 14205275 14205315 41 AGGGCGGCACGCGGGCGCTGCTGGAGTTTCTGCGCGTGCAC AGGGCGGCACGCGGGCGCTGCTGTAGTTTCTGCGCGTGCAC < 41bp 0.928354424276093 0.71772117593156 0.86773074 0.6739027 prediction 0.421266496689065 Functional Loss - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14205295 chr17:14205298 stopgain 1.000 0 24 hm5C_associated_SNPs_89291 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:14205289-14205322
64251 chr20 20007511 20007511 1 + C T UCEC 20007508 + 20007488 20007528 41 TGTCTGTTGCCCCAGAATTTCGACGCCTTGGTTTGGCTGCT TGTCTGTTGCCCCAGAATTTCGATGCCTTGGTTTGGCTGCT < 41bp 0.710632286916717 0.493540701463877 0.86865586 0.7373962 prediction 0.421264573833433 Functional Loss - NAA20 ENSG00000173418 CDS Human protein_coding chr20:20007508 chr20:20007511 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_89293 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:20007482-20007515
64251 chr22 40803287 40803287 1 + C T LGG 40803285 + 40803265 40803305 41 ACCTCCGGGAAGCCATCCTGCGCGTGGCACGCCACTTCCAG ACCTCCGGGAAGCCATCCTGCGTGTGGCACGCCACTTCCAG < 41bp 0.710631714324618 0.437262677718684 0.75102127 0.31855237 prediction 0.421263428649235 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40803285 chr22:40803287 synonymous SNV . 0 23 hm5C_associated_SNPs_89294 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40803286-40803305
64251 chr22 40803288 40803288 1 + G A UCEC 40803285 + 40803265 40803305 41 ACCTCCGGGAAGCCATCCTGCGCGTGGCACGCCACTTCCAG ACCTCCGGGAAGCCATCCTGCGCATGGCACGCCACTTCCAG < 41bp 0.710631714324618 0.474330729525766 0.75102127 0.2822476 prediction 0.421263428649235 Functional Loss - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40803285 chr22:40803288 nonsynonymous SNV 0.783 4 24 hm5C_associated_SNPs_89295 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:40803286-40803305
64251 chr17 33288615 33288615 1 + G T LIHC 33288613 + 33288593 33288633 41 CCTCCGCCTCCGCCCGGACTCCGGCAGGGAAGCGAGTGATA CCTCCGCCTCCGCCCGGACTCCTGCAGGGAAGCGAGTGATA < 41bp 0.710625423454648 0.363815014221688 0.17610171 0.115392 prediction 0.421250846909295 Functional Loss - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33288613 chr17:33288615 synonymous SNV . 0 23 hm5C_associated_SNPs_89301 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:33288583-33288619
64251 chr7 141490896 141490896 1 + G T READ 141490893 + 141490873 141490913 41 AGCCCCTTCTCCATCACCTCCAAGACTTATCCTCCTGATCT AGCCCCTTCTCCATCACCTCCAATACTTATCCTCCTGATCT < 41bp 0.710622866954652 0.320053851755182 0.7922294 0.28518313 prediction 0.421245733909303 Functional Loss - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490893 chr7:141490896 nonsynonymous SNV 0.015 0 24 hm5C_associated_SNPs_89303 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:141490874-141490908
64251 chr22 45133113 45133113 1 + C T UCEC 45133110 + 45133090 45133130 41 ACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGC ACTTGGAGGGCTCTGGGGGCCGGTAGAGTGTCGTGTGAGGC < 41bp 0.719634288521693 0.509013792407695 0.8570839 0.81429046 prediction 0.421240992227997 Functional Loss - PRR5 ENSG00000186654 CDS Human protein_coding chr22:45133110 chr22:45133113 stopgain 0.915 0 24 hm5C_associated_SNPs_89305 0 0 1 LARP4 POSTAR2 ENCODE chr22:45133059-45133124
64251 chr15 57524982 57524982 1 + G A rs12442879 57524979 + 57524959 57524999 41 CACCAATGTCCAGCTTTCATCGCGGCAGTACCAGCAGTTCA CACCAATGTCCAGCTTTCATCGCAGCAGTACCAGCAGTTCA < 41bp 0.759595811831475 0.548981051524121 0.81351805 0.4231795 prediction 0.421229520614708 Functional Loss - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57524979 chr15:57524982 nonsynonymous SNV 0.494 1 24 hm5C_associated_SNPs_89310 1 0 6 IGF2BP1 POSTAR2 ENCODE chr15:57524964-57525006
64251 chr1 3395096 3395096 1 + C T COAD 3395093 + 3395073 3395113 41 GGGGGCGGCAACCGTAGCTCCTCCGTGCCCCACCCCTTCCA GGGGGCGGCAACCGTAGCTCCTCTGTGCCCCACCCCTTCCA < 41bp 0.74007349641246 0.529463453602258 0.1574134 0.038954407 prediction 0.421220085620404 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3395093 chr1:3395096 synonymous SNV . 0 24 hm5C_associated_SNPs_89314 0 0 4 BUD13 POSTAR2 ENCODE chr1:3395057-3395107
64251 chr17 40462541 40462541 1 + G A UCEC 40462538 + 40462518 40462558 41 TTACCAGCCCTGACCATGTACTCGATCAGGATGGAGAATTC TTACCAGCCCTGACCATGTACTCAATCAGGATGGAGAATTC < 41bp 0.772178891282892 0.561570579147711 0.21941975 0.06286216 prediction 0.421216624270362 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40462538 chr17:40462541 nonsynonymous SNV 0.882 4 24 hm5C_associated_SNPs_89315 0 0 5 DDX24 POSTAR2 ENCODE chr17:40462529-40462557
64251 chr5 169267785 169267785 1 + G A LUAD 169267782 + 169267762 169267802 41 CCTTCACCTACCACCATATCCAGGAGATCATGGTCCAGCTG CCTTCACCTACCACCATATCCAGAAGATCATGGTCCAGCTG < 41bp 0.752039487935123 0.541433398215434 0.87367445 0.6220567 prediction 0.421212179439377 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169267782 chr5:169267785 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_89318 0 0 1 YBX3 POSTAR2 ENCODE chr5:169267782-169267820
64251 chr12 132394824 132394824 1 + C T SKCM 132394822 + 132394802 132394842 41 AGTTTTTTCATCACCCTTTCCTCGATGCCAGCCCCTCGGTC AGTTTTTTCATCACCCTTTCCTTGATGCCAGCCCCTCGGTC < 41bp 0.710599102607073 0.434498294970085 0.89816904 0.14741221 prediction 0.421198205214145 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132394822 chr12:132394824 synonymous SNV . 0 23 hm5C_associated_SNPs_89321 0 0 8 FUS POSTAR2 SRX029328 chr12:132394804-132394825
64251 chr12 132394825 132394825 1 + G A UCEC 132394822 + 132394802 132394842 41 AGTTTTTTCATCACCCTTTCCTCGATGCCAGCCCCTCGGTC AGTTTTTTCATCACCCTTTCCTCAATGCCAGCCCCTCGGTC < 41bp 0.710599102607073 0.451574423471175 0.89816904 0.48971167 prediction 0.421198205214145 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132394822 chr12:132394825 nonsynonymous SNV 0.057 2 24 hm5C_associated_SNPs_89322 0 0 9 FUS POSTAR2 SRX029328 chr12:132394804-132394825
64251 chr3 73114849 73114849 1 + C T UCEC 73114846 + 73114826 73114866 41 GATGACGAAGCCACAGAAGTCACCGATGAACCAATGGAACA GATGACGAAGCCACAGAAGTCACTGATGAACCAATGGAACA < 41bp 0.710593800898513 0.497930007784556 0.031136155 0.044915497 prediction 0.421187601797025 Functional Loss - PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73114846 chr3:73114849 synonymous SNV . 0 24 hm5C_associated_SNPs_89327 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:73114839-73114883
64251 chrX 48681793 48681793 1 + C T CESC 48681791 + 48681771 48681811 41 GCTACACTGGCCCAGACCACCTCGGAGGCAGCCATGGAGGG GCTACACTGGCCCAGACCACCTTGGAGGCAGCCATGGAGGG < 41bp 0.710586600078395 0.442206242289575 0.19575465 0.07729402 prediction 0.42117320015679 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681791 chrX:48681793 nonsynonymous SNV 0.974 1 23 hm5C_associated_SNPs_89338 0 0 6 EIF3H POSTAR2 ENCODE chrX:48681777-48681839
64251 chrX 48681794 48681794 1 + G A UCEC 48681791 + 48681771 48681811 41 GCTACACTGGCCCAGACCACCTCGGAGGCAGCCATGGAGGG GCTACACTGGCCCAGACCACCTCAGAGGCAGCCATGGAGGG < 41bp 0.710586600078395 0.48108827344706 0.19575465 0.04212439 prediction 0.42117320015679 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48681791 chrX:48681794 synonymous SNV . 0 24 hm5C_associated_SNPs_89339 0 0 6 EIF3H POSTAR2 ENCODE chrX:48681777-48681839
64251 chr3 42678833 42678833 1 + G A UCEC 42678830 + 42678810 42678850 41 GTCAAAGTCCTCATCACATTCTCGAAGTAGATCAAAGTCCA GTCAAAGTCCTCATCACATTCTCAAAGTAGATCAAAGTCCA < 41bp 0.715512703631069 0.50492733029595 0.35081944 0.067941874 prediction 0.421170746670237 Functional Loss - NKTR ENSG00000114857 CDS Human protein_coding chr3:42678830 chr3:42678833 nonsynonymous SNV 0.976 0 24 hm5C_associated_SNPs_89340 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr3:42678810-42678833
64251 chr19 19790270 19790270 1 + C T GBM 19790268 + 19790248 19790288 41 CATTTCCCCCAGTAGTGGTGCACGGCGCACAGTAACACCAA CATTTCCCCCAGTAGTGGTGCATGGCGCACAGTAACACCAA < 41bp 0.710585324022722 0.451529539121465 0.1616767 0.17996287 prediction 0.421170648045444 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790268 chr19:19790270 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_89341 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19790260-19790314
64251 chr19 19790269 19790269 1 + A C LUAD 19790268 + 19790248 19790288 41 CATTTCCCCCAGTAGTGGTGCACGGCGCACAGTAACACCAA CATTTCCCCCAGTAGTGGTGCCCGGCGCACAGTAACACCAA < 41bp 0.710585324022722 0.450234015654299 0.1616767 0.2512799 prediction 0.421170648045444 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790268 chr19:19790269 synonymous SNV . 0 22 hm5C_associated_SNPs_89342 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19790260-19790314
64251 chr19 19790271 19790271 1 + G A PRAD 19790268 + 19790248 19790288 41 CATTTCCCCCAGTAGTGGTGCACGGCGCACAGTAACACCAA CATTTCCCCCAGTAGTGGTGCACAGCGCACAGTAACACCAA < 41bp 0.710585324022722 0.46969189461871 0.1616767 0.08654046 prediction 0.421170648045444 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790268 chr19:19790271 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_89343 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19790260-19790314
64251 chr12 71946932 71946932 1 + G A CESC 71946929 + 71946909 71946949 41 ATTCCCTGAGGCACCTGTGGCTGGATGACAATGCGTTAACA ATTCCCTGAGGCACCTGTGGCTGAATGACAATGCGTTAACA < 41bp 0.794297631806336 0.58371275096525 0.6432669 0.30614606 prediction 0.42116976168217 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71946929 chr12:71946932 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_89344 0 0 3 SND1 POSTAR2 ENCODE chr12:71946907-71946935
64251 chr6 44102463 44102463 1 + G A SKCM 44102460 + 44102440 44102480 41 GCGTCCCCACCGTGCTGGCTCTCGACTTCATGTGCTTCCTT GCGTCCCCACCGTGCTGGCTCTCAACTTCATGTGCTTCCTT < 41bp 0.820182476686536 0.609605001693479 0.17934325 0.04962477 prediction 0.421154949986113 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44102460 chr6:44102463 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_89350 0 0 3 DDX3X POSTAR2 ENCODE chr6:44102419-44102471
64251 chrX 64949312 64949312 1 + G A BLCA 64949309 + 64949289 64949329 41 ACTCTTCCCAGGTGACTGCCCAGGATGTGCGGAAGGAAAGC ACTCTTCCCAGGTGACTGCCCAGAATGTGCGGAAGGAAAGC < 41bp 0.808834666592894 0.598270180097351 0.8496684 0.34408772 prediction 0.421128972991086 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64949309 chrX:64949312 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_89358 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:64949312-64949313
64251 chr12 81528724 81528724 1 + A C COAD 81528720 + 81528700 81528740 41 TGTGCAAGGATAGGTGCCATCCACAGTCTCATATTTGGAGG TGTGCAAGGATAGGTGCCATCCACCGTCTCATATTTGGAGG < 41bp 0.710561837266541 0.291318840763226 0.0744265 0.040643692 prediction 0.421123674533081 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81528720 chr12:81528724 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_89360 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:81528709-81528728
64251 chr1 146649839 146649839 1 + C T STAD 146649837 + 146649817 146649857 41 CGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCC CGGGCTCTGCGGGCCTCATGCTTGTCGAGTTCTTCGCCCCC < 41bp 0.833447432339214 0.622887146430377 0.43808678 0.28536668 prediction 0.421120571817674 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146649837 chr1:146649839 . . 0 23 hm5C_associated_SNPs_89362 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:146649813-146649872
64251 chr22 18020403 18020403 1 + G A LUSC 18020400 + 18020380 18020420 41 GCAGCTCCACACAGCCCCCGCGGGAGGTGGGCACTTCCAAT GCAGCTCCACACAGCCCCCGCGGAAGGTGGGCACTTCCAAT < 41bp 0.835853117953722 0.625293304446157 0.9185668 0.9118352 prediction 0.42111962701513 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18020400 chr22:18020403 nonsynonymous SNV 0.442 1 24 hm5C_associated_SNPs_89363 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:18020402-18020427
64251 chr4 17814557 17814557 1 + C T rs138337880 17814554 + 17814534 17814574 41 TTTTAGTCTCATGAAGCAAACAGCAATGCAGTGAGATTTAG TTTTAGTCTCATGAAGCAAACAGTAATGCAGTGAGATTTAG < 41bp 0.713293350738091 0.502736938138288 0.09934348 0.20046458 prediction 0.421112825199606 Functional Loss - NCAPG ENSG00000109805 CDS Human protein_coding chr4:17814554 chr4:17814557 synonymous SNV . 0 24 hm5C_associated_SNPs_89365 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:17814546-17814700
64251 chr17 38249572 38249572 1 + G A STAD 38249569 + 38249549 38249589 41 GACAGCAGTGAGGCGGACTCCCCGAGCTCCTCTGAGGAGGA GACAGCAGTGAGGCGGACTCCCCAAGCTCCTCTGAGGAGGA < 41bp 0.803504561512584 0.59295138270804 0.49403197 0.69306165 prediction 0.421106357609089 Functional Loss - THRA ENSG00000126351 CDS Human protein_coding chr17:38249569 chr17:38249572 synonymous SNV . 0 24 hm5C_associated_SNPs_89367 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:38249554-38249594
64251 chr19 10221246 10221246 1 + G T LUSC 10221244 + 10221224 10221264 41 AGGCGCAGAGGCAGGCCCAGCAGGCCCAGAATGTGCAGCGC AGGCGCAGAGGCAGGCCCAGCATGCCCAGAATGTGCAGCGC < 41bp 0.710548577966391 0.345005432556012 0.8343966 0.15071288 prediction 0.421097155932781 Functional Loss - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10221244 chr19:10221246 nonsynonymous SNV 0.336 3 23 hm5C_associated_SNPs_89370 0 0 3 PPIG POSTAR2 ENCODE chr19:10221246-10221284
64251 chr3 9965688 9965688 1 + G A UCEC 9965685 + 9965665 9965705 41 GGTCCAGGGCCCCCCAAAACCCCGGTGGCACAAAAACCTGG GGTCCAGGGCCCCCCAAAACCCCAGTGGCACAAAAACCTGG < 41bp 0.79003381982455 0.579485823961111 0.8011339 0.51367176 prediction 0.421095991726878 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9965685 chr3:9965688 nonsynonymous SNV 0.310 0 24 hm5C_associated_SNPs_89371 0 0 1 DDX55 POSTAR2 ENCODE chr3:9965640-9965755
64251 chrX 65417698 65417698 1 + G A LUSC 65417695 + 65417675 65417715 41 CTGGCCTGGTGGGCCCGCTGCTGGTGTGCAGGGCTGGTGCC CTGGCCTGGTGGGCCCGCTGCTGATGTGCAGGGCTGGTGCC < 41bp 0.710547964942745 0.447190555446973 0.38232198 0.22700596 prediction 0.421095929885489 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65417695 chrX:65417698 nonsynonymous SNV 0.781 5 24 hm5C_associated_SNPs_89372 0 0 10 FMR1 POSTAR2 ENCODE chrX:65417673-65417737
64251 chr4 128807255 128807255 1 + C T UCEC 128807252 + 128807232 128807272 41 TAGAGGCCAAGGACCTTATTCACCAGTTACTTCGTAGAAAT TAGAGGCCAAGGACCTTATTCACTAGTTACTTCGTAGAAAT < 41bp 0.780213317237055 0.569665895581918 0.06333646 0.06370318 prediction 0.421094843310273 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128807252 chr4:128807255 stopgain 1.000 0 24 hm5C_associated_SNPs_89373 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:128807225-128807255
64251 chr5 137761147 137761147 1 + G A ESCA 137761144 + 137761124 137761164 41 AAAAAGCTCAAGTCTGAGCTCTGGAAGCCAGAAGCCTTTAG AAAAAGCTCAAGTCTGAGCTCTGAAAGCCAGAAGCCTTTAG < 41bp 0.785333405527655 0.574788006571064 0.2230317 0.107409775 prediction 0.421090797913182 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137761144 chr5:137761147 stopgain 1.000 1 24 hm5C_associated_SNPs_89374 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:137761127-137761160
64251 chr1 43241028 43241028 1 + C T COAD 43241025 + 43241005 43241045 41 AAGCCAGTCAGTGGCCCTGCCTCCGTGCACTGAACCCAACT AAGCCAGTCAGTGGCCCTGCCTCTGTGCACTGAACCCAACT < 41bp 0.710542139421277 0.495980802445817 0.23613599 0.14696026 prediction 0.421084278842555 Functional Loss - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43241025 chr1:43241028 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_89377 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43241009-43241056
64251 chr1 43241027 43241027 1 + C T SKCM 43241025 + 43241005 43241045 41 AAGCCAGTCAGTGGCCCTGCCTCCGTGCACTGAACCCAACT AAGCCAGTCAGTGGCCCTGCCTTCGTGCACTGAACCCAACT < 41bp 0.710542139421277 0.438829775981449 0.23613599 0.046025306 prediction 0.421084278842555 Functional Loss - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43241025 chr1:43241027 nonsynonymous SNV 0.989 0 23 hm5C_associated_SNPs_89378 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43241009-43241056
64251 chr17 42786685 42786685 1 + C T HNSC 42786683 + 42786663 42786703 41 CTTTCTCAGGAGACGATTGCCTCGAGCTGGAGAGTTCCATG CTTTCTCAGGAGACGATTGCCTTGAGCTGGAGAGTTCCATG < 41bp 0.84064807780721 0.63010987745565 0.4731842 0.32283092 prediction 0.42107640070312 Functional Loss - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42786683 chr17:42786685 synonymous SNV . 0 23 hm5C_associated_SNPs_89380 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:42786665-42786743
64251 chr3 14708970 14708970 1 + G A CESC 14708967 + 14708947 14708987 41 TGTTGGGTATTTTGCCTTTGCCCGAGACAAAGAGTTGAGAA TGTTGGGTATTTTGCCTTTGCCCAAGACAAAGAGTTGAGAA < 41bp 0.778713639065464 0.568175933864223 0.76579714 0.27560037 prediction 0.421075410402481 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14708967 chr3:14708970 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_89381 0 0 2 U2AF1 POSTAR2 ENCODE chr3:14708919-14708976
64251 chr9 131260847 131260847 1 + G A SKCM 131260844 + 131260824 131260864 41 GGAGAGTGCCATTGAAGATGCGAGGAGGCAGGTCAGTCCCG GGAGAGTGCCATTGAAGATGCGAAGAGGCAGGTCAGTCCCG < 41bp 0.710534993293242 0.474446773250008 0.57878286 0.19009972 prediction 0.421069986586485 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131260844 chr9:131260847 nonsynonymous SNV 0.922 0 24 hm5C_associated_SNPs_89384 0 0 5 GRWD1 POSTAR2 ENCODE chr9:131260812-131260854
64251 chr6 24403379 24403379 1 + C T STAD 24403377 + 24403357 24403397 41 ACGTGACCTCTGTGGGTCCTCCCGTTGCTGCCTGCGGCCGC ACGTGACCTCTGTGGGTCCTCCTGTTGCTGCCTGCGGCCGC < 41bp 0.780778076466487 0.57024709059315 0.28873825 0.26855958 prediction 0.421061971746673 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24403377 chr6:24403379 synonymous SNV . 0 23 hm5C_associated_SNPs_89386 0 0 5 DDX3X POSTAR2 ENCODE chr6:24403362-24403411
64251 chr16 50664178 50664178 1 + C T PAAD 50664175 + 50664155 50664195 41 CCCCAACATCCAGCAAGATGCTGCGGGTAAAGCTCACCGTG CCCCAACATCCAGCAAGATGCTGTGGGTAAAGCTCACCGTG < 41bp 0.710528959231913 0.493189628580045 0.15078396 0.1553548 prediction 0.421057918463826 Functional Loss - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50664175 chr16:50664178 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_89390 0 0 3 GRWD1 POSTAR2 ENCODE chr16:50664166-50664222
64251 chr19 57132876 57132876 1 + C T UCEC 57132873 + 57132853 57132893 41 ACTCTTAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGG ACTCTTAGGGGGCTCAGTACCCGTATGTCATGAACTGAAGG < 41bp 0.711167088097993 0.500640790560323 0.35185713 0.31881106 prediction 0.421052595075341 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57132873 chr19:57132876 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_89392 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:57132858-57132894
64251 chr16 30958095 30958095 1 + C T OV 30958092 + 30958072 30958112 41 GGCTGCAGGGGGTGGCAGAACTGCGTCTGGCAGGTTTGGAG GGCTGCAGGGGGTGGCAGAACTGTGTCTGGCAGGTTTGGAG < 41bp 0.749844436304148 0.539320346344671 0.65464234 0.3970273 prediction 0.421048179918954 Functional Loss - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30958092 chr16:30958095 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_89393 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30958073-30958130
64251 chr1 1426050 1426050 1 + A C rs138009989 1426049 + 1426029 1426069 41 CTCAGCTGGCCGTGTCCTGGCAGGTGAGTCAGGCTCCGGCA CTCAGCTGGCCGTGTCCTGGCCGGTGAGTCAGGCTCCGGCA < 41bp 0.844011300607066 0.633493461153662 0.90864885 0.64023113 prediction 0.421035678906808 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1426049 chr1:1426050 nonsynonymous SNV 0.120 5 22 hm5C_associated_SNPs_89401 0 0 3 DDX24 POSTAR2 ENCODE chr1:1426026-1426052
64251 chr20 49197963 49197963 1 + C T COAD 49197960 + 49197940 49197980 41 CCTGGTCAACATGTGCGTGGCTACGGTCCTCACGGCCGGCG CCTGGTCAACATGTGCGTGGCTATGGTCCTCACGGCCGGCG < 41bp 0.710517682750977 0.492519194432872 0.34967265 0.27963865 prediction 0.421035365501955 Functional Loss - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197960 chr20:49197963 nonsynonymous SNV 0.922 3 24 hm5C_associated_SNPs_89402 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr20:49197934-49197964
64251 chr20 49458396 49458396 1 + C T UCEC 49458393 + 49458373 49458413 41 ATGGGGCCTTCCCTCAGGCCCTGCGGAGGTGGCTGGGATCC ATGGGGCCTTCCCTCAGGCCCTGTGGAGGTGGCTGGGATCC < 41bp 0.7319784422112 0.521462797819423 0.3405285 0.3345449 prediction 0.421031288783555 Functional Loss - BCAS4 ENSG00000124243 CDS Human protein_coding chr20:49458393 chr20:49458396 nonsynonymous SNV 0.097 1 24 hm5C_associated_SNPs_89403 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:49458378-49458400
64251 chr1 151263308 151263308 1 + C T rs191061324 151263305 + 151263285 151263325 41 GATCTGGAGGCCATGGCCCTCTGCGCTACCGGAGCAGCAGC GATCTGGAGGCCATGGCCCTCTGTGCTACCGGAGCAGCAGC < 41bp 0.727035674829761 0.516533195675154 0.18236566 0.1372118 prediction 0.421004958309214 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263305 chr1:151263308 nonsynonymous SNV 0.006 1 24 hm5C_associated_SNPs_89409 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151263271-151263321
64251 chr19 11557933 11557933 1 + C T rs201337319 11557930 + 11557910 11557950 41 CAGACAGACGCCACCTCTTTCTACGACCGCGTCTGGGCCGC CAGACAGACGCCACCTCTTTCTATGACCGCGTCTGGGCCGC < 41bp 0.750149691033046 0.53965080928522 0.69728494 0.5352503 prediction 0.420997763495651 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11557930 chr19:11557933 synonymous SNV . 0 24 hm5C_associated_SNPs_89410 1 0 11 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:11557900-11557940
64251 chr19 14578766 14578766 1 + G A GBM 14578763 + 14578743 14578783 41 AGAAAGGGGACATTGTGGCCCGAGACGAGGTGGAGAGGTGG AGAAAGGGGACATTGTGGCCCGAAACGAGGTGGAGAGGTGG < 41bp 0.710494340218145 0.463599123319723 0.42650712 0.1632204 prediction 0.420988680436289 Functional Loss - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14578763 chr19:14578766 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_89412 0 0 5 DDX55 POSTAR2 ENCODE chr19:14578761-14578779
64251 chr12 120899883 120899883 1 + C T BRCA 120899881 + 120899861 120899901 41 CCTGCTTTGGTATGGAGAGTCACGGCCCCTTGACCCAGACC CCTGCTTTGGTATGGAGAGTCATGGCCCCTTGACCCAGACC < 41bp 0.818773906304463 0.608293127512215 0.102611005 0.117108256 prediction 0.420961557584496 Functional Loss - SRSF9 ENSG00000111786 CDS Human protein_coding chr12:120899881 chr12:120899883 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_89421 0 0 4 DROSHA POSTAR2 ENCODE chr12:120899859-120899908
64251 chr7 97823224 97823224 1 + G T UCEC 97823222 + 97823202 97823242 41 CCGAGCAAAGTCCTGCTGCCCAGGATAGCTGCCTGGAAGCC CCGAGCAAAGTCCTGCTGCCCATGATAGCTGCCTGGAAGCC < 41bp 0.710479497964795 0.366639128317225 0.86825883 0.12494454 prediction 0.420958995929589 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97823222 chr7:97823224 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_89424 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:97823209-97823227
64251 chrX 147027072 147027072 1 + G A COAD 147027069 + 147027049 147027089 41 CATAGGAAACGACGATCACTCCCGAACAGATAATCGTCCAC CATAGGAAACGACGATCACTCCCAAACAGATAATCGTCCAC < 41bp 0.710478302121153 0.495497471261297 0.17076623 0.023809731 prediction 0.420956604242307 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147027069 chrX:147027072 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89426 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147027040-147027120
64251 chrX 147027071 147027071 1 + C T UCEC 147027069 + 147027049 147027089 41 CATAGGAAACGACGATCACTCCCGAACAGATAATCGTCCAC CATAGGAAACGACGATCACTCCTGAACAGATAATCGTCCAC < 41bp 0.710478302121153 0.425792769360161 0.17076623 0.13830501 prediction 0.420956604242307 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147027069 chrX:147027071 stopgain 1.000 1 23 hm5C_associated_SNPs_89427 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147027040-147027120
64251 chr12 4409047 4409047 1 + G A SKCM 4409044 + 4409024 4409064 41 AGGATTGTCTCAAAGCTTGCCAGGAGCAGATTGAGGCGGTG AGGATTGTCTCAAAGCTTGCCAGAAGCAGATTGAGGCGGTG < 41bp 0.775515538808456 0.565038726630804 0.8959337 0.8431996 prediction 0.420953624355302 Functional Loss - CCND2 ENSG00000118971 CDS Human protein_coding chr12:4409044 chr12:4409047 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89429 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:4409026-4409053
64251 chr5 43173495 43173495 1 + C T UCEC 43173492 + 43173472 43173512 41 CACTCTGAAATGTCACCTCACTGCATGCCAAACTGGAGTAG CACTCTGAAATGTCACCTCACTGTATGCCAAACTGGAGTAG < 41bp 0.710471749071211 0.484313492119444 0.10212615 0.09128159 prediction 0.420943498142421 Functional Loss - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43173492 chr5:43173495 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_89432 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:43173465-43173505
64251 chr12 56480402 56480402 1 + G C LUAD 56480401 + 56480381 56480421 41 GGAGGGACATCGTGAGGGACCGAGATGCTGAGATAGTGGTG GGAGGGACATCGTGAGGGACCCAGATGCTGAGATAGTGGTG < 41bp 0.71047087301193 0.407120632605468 0.53297615 0.3789166 prediction 0.42094174602386 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56480401 chr12:56480402 nonsynonymous SNV 0.311 1 22 hm5C_associated_SNPs_89433 0 0 2 PPIG POSTAR2 ENCODE chr12:56480365-56480442
64251 chr12 56480404 56480404 1 + G A SKCM 56480401 + 56480381 56480421 41 GGAGGGACATCGTGAGGGACCGAGATGCTGAGATAGTGGTG GGAGGGACATCGTGAGGGACCGAAATGCTGAGATAGTGGTG < 41bp 0.71047087301193 0.47060299383413 0.53297615 0.19617155 prediction 0.42094174602386 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56480401 chr12:56480404 nonsynonymous SNV 0.232 1 24 hm5C_associated_SNPs_89434 0 0 2 PPIG POSTAR2 ENCODE chr12:56480365-56480442
64251 chr17 26943955 26943955 1 - G A UCEC 26943958 - 26943938 26943978 41 CAGCTAGCTCTCCGCCTCTTCAGCAAAGTTCGGCCCCCTGT CAGCTAGCTCTCCGCCTCTTCAGTAAAGTTCGGCCCCCTGT < 41bp 0.743356477175871 0.532891497972142 0.091594815 0.079992205 prediction 0.420929958407459 Functional Loss - KIAA0100 ENSG00000007202 CDS Human protein_coding chr17:26943958 chr17:26943955 synonymous SNV . 0 24 hm5C_associated_SNPs_89436 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr17:26943954-26943955
64251 chr6 160199740 160199740 1 - C T UCEC 160199743 - 160199723 160199763 41 GGGTCACAAGAATTCGACAGCCAGATGCTCCAAGAGGGTGG GGGTCACAAGAATTCGACAGCCAAATGCTCCAAGAGGGTGG < 41bp 0.769918245089377 0.559456623966906 0.904225 0.9002838 prediction 0.420923242244942 Functional Loss - ACAT2 ENSG00000120437 CDS Human protein_coding chr6:160199743 chr6:160199740 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_89439 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:160199719-160199750
64251 chr12 7050155 7050155 1 + C T UCEC 7050153 + 7050133 7050173 41 CCCTGCTTCCTCACCCTCTGCACGAGAACGAAGTTCTTCGT CCCTGCTTCCTCACCCTCTGCATGAGAACGAAGTTCTTCGT < 41bp 0.710452858627028 0.420737529766336 0.23060459 0.121142656 prediction 0.420905717254056 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7050153 chr12:7050155 synonymous SNV . 0 23 hm5C_associated_SNPs_89446 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:7050118-7050162
64251 chr12 52379059 52379059 1 + G A COAD 52379056 + 52379036 52379076 41 GCATGTGTGCCATAGCAGACCTGGGCCTGGCTGTCCGTCAT GCATGTGTGCCATAGCAGACCTGAGCCTGGCTGTCCGTCAT < 41bp 0.793434200608699 0.582982587327508 0.39408922 0.18074724 prediction 0.420903226562383 Functional Loss - ACVR1B ENSG00000135503 CDS Human protein_coding chr12:52379056 chr12:52379059 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_89447 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:52379048-52379072
64251 chr12 120105913 120105913 1 + G C rs3182909 120105912 + 120105892 120105932 41 GCCGGAACCGGCTCCCGGCCCGAGGGGCGTGGTGTCCTGGT GCCGGAACCGGCTCCCGGCCCCAGGGGCGTGGTGTCCTGGT < 41bp 0.852650154804281 0.642200458614579 0.92881167 0.9260806 prediction 0.420899392379403 Functional Loss - PRKAB1 ENSG00000111725 UTR5 Human protein_coding chr12:120105912 chr12:120105913 . . 0 22 hm5C_associated_SNPs_89449 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:120105913-120105914
64251 chr7 106509951 106509951 1 + G A SKCM 106509948 + 106509928 106509968 41 GAGCCATTGCAGTTCAGAAACTGGAGAGCTTGGAGGACGAT GAGCCATTGCAGTTCAGAAACTGAAGAGCTTGGAGGACGAT < 41bp 0.786385210222828 0.575938267751767 0.4005856 0.41163266 prediction 0.420893884942122 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509948 chr7:106509951 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_89452 0 0 1 UCHL5 POSTAR2 ENCODE chr7:106509930-106509977
64251 chr20 42271136 42271136 1 + G A LUSC 42271133 + 42271113 42271153 41 TCTTAGGTACTGAAGAAGACCTGGAATTTTATGTCAGGAAG TCTTAGGTACTGAAGAAGACCTGAAATTTTATGTCAGGAAG < 41bp 0.729896396944438 0.519449818717558 0.27369586 0.38061523 prediction 0.42089315645376 Functional Loss - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42271133 chr20:42271136 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89453 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:42271136-42271160
64251 chr1 48699341 48699341 1 + G T LUAD 48699337 + 48699317 48699357 41 TCTTCCACAGACGAGGTGGGCTGCGTGGACCCTGATGTCTG TCTTCCACAGACGAGGTGGGCTGCTTGGACCCTGATGTCTG < 41bp 0.716575218935772 0.506130052874776 0.4062654 0.367323 prediction 0.420890332121992 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48699337 chr1:48699341 nonsynonymous SNV 0.818 5 25 hm5C_associated_SNPs_89456 0 0 4 GRWD1 POSTAR2 ENCODE chr1:48699326-48699365
64251 chr11 126283429 126283429 1 + G A COAD 126283426 + 126283406 126283446 41 ACCACGGGCCTGTTGGCCATCACGCTGGCCCTCCACCTCTG ACCACGGGCCTGTTGGCCATCACACTGGCCCTCCACCTCTG < 41bp 0.815289182290441 0.604847818796728 0.29621857 0.4776686 prediction 0.420882726987424 Functional Loss - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126283426 chr11:126283429 synonymous SNV . 0 24 hm5C_associated_SNPs_89458 0 0 1 YBX3 POSTAR2 ENCODE chr11:126283406-126283489
64251 chr17 42827155 42827155 1 + G A rs11554258 42827152 + 42827132 42827172 41 CCCTTGCCTCTCTGCAGAGCCGCGGGTTAGCTGTTGGTGTG CCCTTGCCTCTCTGCAGAGCCGCAGGTTAGCTGTTGGTGTG < 41bp 0.798475454038837 0.588037335492019 0.8794626 0.6109619 prediction 0.420876237093637 Functional Loss - DBF4B ENSG00000161692 UTR3 Human protein_coding chr17:42827152 chr17:42827155 . . 0 24 hm5C_associated_SNPs_89464 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:42827146-42827173
64251 chr19 41082842 41082842 1 + A C rs544781931 41082838 + 41082818 41082858 41 GCTACTGCAGCCGAGGGGGTCCCCAGTCGGGGGCCTCCCGG GCTACTGCAGCCGAGGGGGTCCCCCGTCGGGGGCCTCCCGG < 41bp 0.710435404105618 0.308393871623453 0.72153145 0.21778154 prediction 0.420870808211236 Functional Loss - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41082838 chr19:41082842 nonsynonymous SNV 0.157 0 25 hm5C_associated_SNPs_89467 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:41082840-41082860
64251 chr17 41382303 41382303 1 + G A rs556000852 41382300 + 41382280 41382320 41 ATTAGCCGGGCGTGGTGCTGCGCGTCAATAATCCCAGCTAC ATTAGCCGGGCGTGGTGCTGCGCATCAATAATCCCAGCTAC < 41bp 0.710428000920528 0.46352545763393 0.3898212 0.16683984 prediction 0.420856001841055 Functional Loss - LINC00854;LINC00910 ENSG00000236383 ncRNA_exonic Human protein_coding chr17:41382300 chr17:41382303 . . 0 24 hm5C_associated_SNPs_89471 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:41382290-41382311
64251 chr15 41099974 41099974 1 + G A KIRP 41099971 + 41099951 41099991 41 GGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGAC GGGGCCCAGGACTTGGCCGGCGTAATCTCAGCTCTGCAGAC < 41bp 0.710426850291955 0.459936648045912 0.7744756 0.58167607 prediction 0.420853700583911 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41099971 chr15:41099974 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_89474 0 0 24 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:41099960-41099980
64251 chr12 133682920 133682920 1 + G T GBM 133682918 + 133682898 133682938 41 TAAACATCAGAGAATTCATGCTGGAGAAAAGCTCTATGAAT TAAACATCAGAGAATTCATGCTTGAGAAAAGCTCTATGAAT < 41bp 0.710426277208358 0.381978002610381 0.34587786 0.12501127 prediction 0.420852554416715 Functional Loss - ZNF140 ENSG00000196387 CDS Human protein_coding chr12:133682918 chr12:133682920 stopgain 1.000 0 23 hm5C_associated_SNPs_89475 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:133682918-133682951
64251 chr1 150463975 150463975 1 + C T SKCM 150463973 + 150463953 150463993 41 AGGCTTCACGGGATCAGCTTCGCCAGTTGTTCAAGGTGGGG AGGCTTCACGGGATCAGCTTCGTCAGTTGTTCAAGGTGGGG < 41bp 0.710419195009362 0.42671615571988 0.15472424 0.16427463 prediction 0.420838390018724 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463973 chr1:150463975 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_89479 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150463955-150463978
64251 chr1 150463976 150463976 1 + C T SKCM 150463973 + 150463953 150463993 41 AGGCTTCACGGGATCAGCTTCGCCAGTTGTTCAAGGTGGGG AGGCTTCACGGGATCAGCTTCGCTAGTTGTTCAAGGTGGGG < 41bp 0.710419195009362 0.485683406921143 0.15472424 0.25630346 prediction 0.420838390018724 Functional Loss - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463973 chr1:150463976 stopgain 0.966 0 24 hm5C_associated_SNPs_89480 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150463955-150463978
64251 chr16 27460293 27460293 1 - C A LUAD 27460296 - 27460276 27460316 41 TCCCAGGGGCCCTCCTAGCCCAGGGCTGCCAGCTGAGACAC TCCCAGGGGCCCTCCTAGCCCAGTGCTGCCAGCTGAGACAC < 41bp 0.939873931172578 0.729456153010073 0.91702247 0.2807779 prediction 0.420835556325009 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27460296 chr16:27460293 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_89482 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:27460291-27460329
64251 chr19 34832940 34832940 1 + C T BLCA 34832938 + 34832918 34832958 41 ACTGCCTGTGCCCCCTCCACCACGGGCACCCCAGGCTGGGG ACTGCCTGTGCCCCCTCCACCATGGGCACCCCAGGCTGGGG < 41bp 0.835721577363561 0.625309380242295 0.88939995 0.7502008 prediction 0.420824394242531 Functional Loss - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832938 chr19:34832940 nonsynonymous SNV 0.981 2 23 hm5C_associated_SNPs_89485 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:34832900-34832971
64251 chr3 143691543 143691543 1 + G A BLCA 143691540 + 143691520 143691560 41 CGCGAGCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGC CGCGAGCTGGCGCAGCTCGACCAAAGCATCTGCAAGCGGGC < 41bp 0.805437700245281 0.595026984526263 0.18159044 0.25666022 prediction 0.420821431438036 Functional Loss - C3orf58 ENSG00000181744 CDS Human protein_coding chr3:143691540 chr3:143691543 synonymous SNV . 0 24 hm5C_associated_SNPs_89488 0 0 2 SND1 POSTAR2 ENCODE chr3:143691469-143691547
64251 chr3 169498526 169498526 1 + G A UCEC 169498523 + 169498503 169498543 41 TTTGCAACTTCTAGCAATCTCAAGATTCATGCAAGGTAAAA TTTGCAACTTCTAGCAATCTCAAAATTCATGCAAGGTAAAA < 41bp 0.746215769084677 0.535805872387552 0.23535901 0.19401813 prediction 0.42081979339425 Functional Loss - MYNN ENSG00000085274 CDS Human protein_coding chr3:169498523 chr3:169498526 synonymous SNV . 0 24 hm5C_associated_SNPs_89490 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:169498502-169498532
64251 chr14 59961848 59961848 1 + G T UCEC 59961845 + 59961825 59961865 41 TTCTTTATATTCGTTCATGTCGAGTATTGATGCTTTCTGAC TTCTTTATATTCGTTCATGTCGATTATTGATGCTTTCTGAC < 41bp 0.710408377259014 0.323900592931551 0.22090906 0.083789766 prediction 0.420816754518028 Functional Loss - JKAMP ENSG00000050130 CDS Human protein_coding chr14:59961845 chr14:59961848 nonsynonymous SNV 0.355 2 24 hm5C_associated_SNPs_89493 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:59961800-59961853
64251 chr19 52817532 52817532 1 + G T LUAD 52817529 + 52817509 52817549 41 ACTACAGGAACCTGGTCTCCCTGGGTGAGGATCATGCCCCT ACTACAGGAACCTGGTCTCCCTGTGTGAGGATCATGCCCCT < 41bp 0.928765969918773 0.718357966575966 0.83034194 0.116280645 prediction 0.420816006685615 Functional Loss - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52817529 chr19:52817532 stopgain 0.992 2 24 hm5C_associated_SNPs_89494 0 0 1 ZNF622 POSTAR2 ENCODE chr19:52817423-52817533
64251 chr3 69151154 69151154 1 + C T LUSC 69151152 + 69151132 69151172 41 TTGGCGAGCTATTTCCTTATCTCCATGTTTGGAGGAGTCAT TTGGCGAGCTATTTCCTTATCTTCATGTTTGGAGGAGTCAT < 41bp 0.874641988158263 0.664236953859682 0.93912065 0.38305956 prediction 0.420810068597163 Functional Loss - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69151152 chr3:69151154 nonsynonymous SNV 0.953 3 23 hm5C_associated_SNPs_89501 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:69151140-69151160
64251 chr7 101957803 101957803 1 + C T LUAD 101957800 + 101957780 101957820 41 ACCACGGCCTCTTCGTGATCCGCCAAAGTGAGACTCGGCCT ACCACGGCCTCTTCGTGATCCGCTAAAGTGAGACTCGGCCT < 41bp 0.710402166416431 0.488809558087311 0.87333655 0.53544056 prediction 0.420804332832862 Functional Loss - SH2B2 ENSG00000160999 CDS Human protein_coding chr7:101957800 chr7:101957803 stopgain 0.998 1 24 hm5C_associated_SNPs_89504 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr7:101957800-101957820
64251 chr11 65744159 65744159 1 + C T KICH 65744156 + 65744136 65744176 41 CGGGATGAGGAGCGCTCAGCCAACGGTGGCTCCGAATCTGA CGGGATGAGGAGCGCTCAGCCAATGGTGGCTCCGAATCTGA < 41bp 0.731903443299398 0.521503383981293 0.5163105 0.37437385 prediction 0.420800118636209 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65744156 chr11:65744159 synonymous SNV . 0 24 hm5C_associated_SNPs_89507 0 0 4 GRWD1 POSTAR2 ENCODE chr11:65744135-65744173
64251 chr4 95539205 95539205 1 + G A STAD 95539202 + 95539182 95539222 41 GGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAGCC GGCTTCCTCGGTAGCTTCCACACAGAGCATGCCCGAGAGCC < 41bp 0.798818809153922 0.588425677762324 0.14852348 0.019375265 prediction 0.420786262783198 Functional Loss - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95539202 chr4:95539205 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_89510 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:95539170-95539227
64251 chr6 161508880 161508880 1 + A C rs35533223 161508879 + 161508859 161508899 41 CCTATCTGCTTCTGACCAAGCACGGTGATCGAGCCCGTGAT CCTATCTGCTTCTGACCAAGCCCGGTGATCGAGCCCGTGAT < 41bp 0.71039308083348 0.444364294820526 0.78950536 0.89423233 prediction 0.420786161666961 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161508879 chr6:161508880 nonsynonymous SNV 0.225 1 22 hm5C_associated_SNPs_89511 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:161508858-161508883
64251 chr6 161508882 161508882 1 + G T LUAD 161508879 + 161508859 161508899 41 CCTATCTGCTTCTGACCAAGCACGGTGATCGAGCCCGTGAT CCTATCTGCTTCTGACCAAGCACTGTGATCGAGCCCGTGAT < 41bp 0.71039308083348 0.307084008618591 0.78950536 0.038587093 prediction 0.420786161666961 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161508879 chr6:161508882 nonsynonymous SNV 0.009 2 24 hm5C_associated_SNPs_89512 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr6:161508858-161508883
64251 chr5 52778794 52778794 1 + G T LUAD 52778792 + 52778772 52778812 41 CTGAGCAAGGAGGAGTGCTGCAGCACCGGCCGGCTGAGCAC CTGAGCAAGGAGGAGTGCTGCATCACCGGCCGGCTGAGCAC < 41bp 0.905353388347263 0.69496323781957 0.41141254 0.12246376 prediction 0.420780301055386 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52778792 chr5:52778794 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_89514 0 0 3 DDX3X POSTAR2 ENCODE chr5:52778776-52778825
64251 chr19 13060211 13060211 1 + C T BLCA 13060209 + 13060189 13060229 41 GCAGCTGGGCCAGGAGAACCCTCAGCTTTTACAGGTGTGGT GCAGCTGGGCCAGGAGAACCCTTAGCTTTTACAGGTGTGGT < 41bp 0.710389123348333 0.437549398932311 0.2081821 0.17747205 prediction 0.420778246696666 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13060209 chr19:13060211 stopgain 1.000 0 23 hm5C_associated_SNPs_89515 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr19:13060183-13060213
64251 chr14 93299614 93299614 1 + G A COAD 93299611 + 93299591 93299631 41 TGGTCTTTCAACTGGAGCGCCTCGAACAGCAGATGAACTCC TGGTCTTTCAACTGGAGCGCCTCAAACAGCAGATGAACTCC < 41bp 0.776078510754468 0.565690282482523 0.9235791 0.90222776 prediction 0.420776456543891 Functional Loss - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93299611 chr14:93299614 nonsynonymous SNV 0.139 4 24 hm5C_associated_SNPs_89516 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:93299592-93299630
64251 chr6 36075286 36075286 1 + C T OV 36075283 + 36075263 36075303 41 GGACTCAGATAAGAGAATTACAGCGGCCCAAGCCCTTGCAC GGACTCAGATAAGAGAATTACAGTGGCCCAAGCCCTTGCAC < 41bp 0.731206749204464 0.520819295614646 0.43570766 0.3957727 prediction 0.420774907179634 Functional Loss - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:36075283 chr6:36075286 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89518 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:36075228-36075290
64251 chr19 39868449 39868449 1 + C T UCEC 39868447 + 39868427 39868467 41 AGACATCCCCAGCCAGTTTACACGGGTGATGGGCAAAGGTG AGACATCCCCAGCCAGTTTACATGGGTGATGGGCAAAGGTG < 41bp 0.843743437212197 0.633362228534541 0.54192543 0.58875614 prediction 0.420762417355313 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868447 chr19:39868449 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_89524 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39868428-39868464
64251 chr17 72920768 72920768 1 + C T STAD 72920766 + 72920746 72920786 41 CAGGGCCCCAAGGAGAGCCCCCCGGCGCCGCGTGCGGGCCC CAGGGCCCCAAGGAGAGCCCCCTGGCGCCGCGTGCGGGCCC < 41bp 0.800232723319633 0.589851879065289 0.14892805 0.18730193 prediction 0.420761688508688 Functional Loss - OTOP2 ENSG00000183034 CDS Human protein_coding chr17:72920766 chr17:72920768 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_89525 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:72920757-72920785
64251 chr3 124458976 124458976 1 + G C LUSC 124458975 + 124458955 124458995 41 AAGTGGGCCTGCCTTTGCATCGGGGGTGCCTCCTTATTGCG AAGTGGGCCTGCCTTTGCATCCGGGGTGCCTCCTTATTGCG < 41bp 0.894713977773903 0.684334117399133 0.95770407 0.93204117 prediction 0.42075972074954 Functional Loss - UMPS ENSG00000114491 CDS Human protein_coding chr3:124458975 chr3:124458976 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_89528 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr3:124458954-124458977
64251 chr6 7579661 7579661 1 + G A LGG 7579658 + 7579638 7579678 41 TCAAAGCGAAGCTTGCGAGCCTGGAGGAGCTGAAGAGACAG TCAAAGCGAAGCTTGCGAGCCTGAAGGAGCTGAAGAGACAG < 41bp 0.752262329371247 0.541883500831338 0.33063772 0.24679375 prediction 0.420757657079817 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7579658 chr6:7579661 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89530 0 0 12 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:7579660-7579680
64251 chr12 64812776 64812776 1 + G T rs551101166 64812774 + 64812754 64812794 41 GTTTTTTTTTGACATTCTCTCAGTAGTGGACCTAAATCCAA GTTTTTTTTTGACATTCTCTCATTAGTGGACCTAAATCCAA < 41bp 0.710374236916958 0.373731287463856 0.30085003 0.14352784 prediction 0.420748473833916 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64812774 chr12:64812776 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_89535 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714641 chr12:64812718-64812776
64251 chrX 101818182 101818182 1 + C T SKCM 101818180 + 101818160 101818200 41 TCTCCCAGCAAGCTCTTGATCTCCAGAGGCTCCGCTTTGAC TCTCCCAGCAAGCTCTTGATCTTCAGAGGCTCCGCTTTGAC < 41bp 0.880677458369084 0.670306704485757 0.95483625 0.83169746 prediction 0.420741507766653 Functional Loss - NXF4 ENSG00000196970 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:101818180 chrX:101818182 . . 0 23 hm5C_associated_SNPs_89538 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:101818172-101818196
64251 chr7 16705118 16705118 1 + G A UCEC 16705115 + 16705095 16705135 41 AACAGGCCAGCGGTTCAAAACTCGGAAAAGGGGTAGGTTGT AACAGGCCAGCGGTTCAAAACTCAGAAAAGGGGTAGGTTGT < 41bp 0.785455154619437 0.575094630015295 0.09821886 0.05987227 prediction 0.420721049208284 Functional Loss - BZW2 ENSG00000136261 CDS Human protein_coding chr7:16705115 chr7:16705118 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89544 0 0 3 FXR2 POSTAR2 ENCODE chr7:16705069-16705121
64251 chr13 114203769 114203769 1 + G A COAD 114203766 + 114203746 114203786 41 CTCCTTATACTGAGTGTGACCACGCTCAGCCTCTTGCTCGC CTCCTTATACTGAGTGTGACCACACTCAGCCTCTTGCTCGC < 41bp 0.799325791681716 0.588969748285501 0.6243184 0.38345635 prediction 0.42071208679243 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114203766 chr13:114203769 synonymous SNV . 0 24 hm5C_associated_SNPs_89546 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:114203751-114203785
64251 chr16 89287559 89287559 1 + C T UCEC 89287557 + 89287537 89287577 41 TGGCAGCCCCTGACCTGGCCCACGGTAAGTCCTGGTGGGGC TGGCAGCCCCTGACCTGGCCCATGGTAAGTCCTGGTGGGGC < 41bp 0.710354356117245 0.459172549043858 0.31536692 0.39730844 prediction 0.420708712234489 Functional Loss - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89287557 chr16:89287559 synonymous SNV . 0 23 hm5C_associated_SNPs_89547 0 0 3 PPIG POSTAR2 ENCODE chr16:89287478-89287577
64251 chr16 23581820 23581820 1 + C T COAD 23581818 + 23581798 23581838 41 CAGGCGTTTCAGTTGGGCCCCACGGAAGCCTCTTACTACTG CAGGCGTTTCAGTTGGGCCCCATGGAAGCCTCTTACTACTG < 41bp 0.710353153139712 0.448001516673525 0.06406826 0.025103152 prediction 0.420706306279425 Functional Loss - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23581818 chr16:23581820 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_89549 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:23581803-23581821
64251 chr19 4432089 4432089 1 + C T PAAD 4432086 + 4432066 4432106 41 GTGTGGGCGGCTGACAGAGACTGCGCAGGCGATGACCTGAA GTGTGGGCGGCTGACAGAGACTGTGCAGGCGATGACCTGAA < 41bp 0.710351908704519 0.486337727184108 0.15226075 0.13680467 prediction 0.420703817409039 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4432086 chr19:4432089 synonymous SNV . 0 24 hm5C_associated_SNPs_89551 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4432050-4432096
64251 chrX 54839593 54839593 1 + G T OV 54839590 + 54839570 54839610 41 GCGCAAGTTGGGGCTGCGCCCTGGGTATGATTGGGCTCTCT GCGCAAGTTGGGGCTGCGCCCTGTGTATGATTGGGCTCTCT < 41bp 0.934004538131481 0.723653759093414 0.86990964 0.33864737 prediction 0.420701558076133 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54839590 chrX:54839593 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89553 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chrX:54839585-54839611
64251 chr11 606503 606503 1 + C T LIHC 606500 + 606480 606520 41 AGGAGGAGCCAGTGCCTGACCTGCTGGGCAGCATCCTGTCG AGGAGGAGCCAGTGCCTGACCTGTTGGGCAGCATCCTGTCG < 41bp 0.722953394755693 0.512602685235831 0.08505723 0.12750766 prediction 0.420701419039724 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:606500 chr11:606503 synonymous SNV . 0 24 hm5C_associated_SNPs_89554 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:606496-606511
64251 chr6 150569907 150569907 1 + G A PRAD 150569904 + 150569884 150569924 41 ATTTATCAAAGAGCTGCTTTCTCGGATAAGAGGCATGAGGA ATTTATCAAAGAGCTGCTTTCTCAGATAAGAGGCATGAGGA < 41bp 0.741514242912116 0.531166559634015 0.7642858 0.38654855 prediction 0.420695366556203 Functional Loss - PPP1R14C ENSG00000198729 CDS Human protein_coding chr6:150569904 chr6:150569907 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89557 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:150569886-150569995
64251 chr19 13869957 13869957 1 + G T HNSC 13869954 + 13869934 13869974 41 CTGGAGACGGACGCCATGTTCCGGCTGGAGCATGGCGAGGC CTGGAGACGGACGCCATGTTCCGTCTGGAGCATGGCGAGGC < 41bp 0.710346127980984 0.3067697333896 0.8302704 0.2914347 prediction 0.420692255961967 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869954 chr19:13869957 synonymous SNV . 0 24 hm5C_associated_SNPs_89559 0 0 5 BUD13 POSTAR2 ENCODE chr19:13869730-13870004
64251 chr7 98985763 98985763 1 + G A UCEC 98985760 + 98985740 98985780 41 GCCGCACATGGAAGCCCACGCTGGTCATCCTGCGGATCAAC GCCGCACATGGAAGCCCACGCTGATCATCCTGCGGATCAAC < 41bp 0.81764472651568 0.607304629855921 0.31698835 0.15982684 prediction 0.420680193319519 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985760 chr7:98985763 nonsynonymous SNV 0.962 2 24 hm5C_associated_SNPs_89565 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985750-98985774
64251 chr9 115631162 115631162 1 + G A rs116220712 115631159 + 115631139 115631179 41 CGGAGACTCTTCTACCTACACAGGGCCTGGCACCCTATACC CGGAGACTCTTCTACCTACACAGAGCCTGGCACCCTATACC < 41bp 0.710337729510697 0.464285539930697 0.47222325 0.21084824 prediction 0.420675459021393 Functional Loss - SNX30 ENSG00000148158 UTR3 Human protein_coding chr9:115631159 chr9:115631162 . . 0 24 hm5C_associated_SNPs_89568 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:115631131-115631167
64251 chr11 63719721 63719721 1 + C T rs114511851 63719719 + 63719699 63719739 41 CCTCTTCTCAGGTTGAATGTCTCCATTGAATGTAAGCGAGT CCTCTTCTCAGGTTGAATGTCTTCATTGAATGTAAGCGAGT < 41bp 0.710334087811497 0.398379035330322 0.9647295 0.45873094 prediction 0.420668175622994 Functional Loss - NAA40 ENSG00000110583 CDS Human protein_coding chr11:63719719 chr11:63719721 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_89573 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr11:63719705-63719750
64251 chr9 133759397 133759397 1 + C T UCEC 133759395 + 133759375 133759415 41 TGCCGTGTCTCCATTGCTCCCTCGAAAAGAGCGAGGTCCCC TGCCGTGTCTCCATTGCTCCCTTGAAAAGAGCGAGGTCCCC < 41bp 0.710333195838927 0.419978006319687 0.93409634 0.21465671 prediction 0.420666391677854 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133759395 chr9:133759397 stopgain 0.981 1 23 hm5C_associated_SNPs_89575 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr9:133759396-133759397
64251 chr4 89414196 89414196 1 + G A rs148027798 89414193 + 89414173 89414213 41 GTGGAGAAATTGGGTATGACCTCGGAGGAGTCAAGAAAGAG GTGGAGAAATTGGGTATGACCTCAGAGGAGTCAAGAAAGAG < 41bp 0.710333156051483 0.468229214508701 0.29378363 0.26310617 prediction 0.420666312102965 Functional Loss - HERC5 ENSG00000138646 CDS Human protein_coding chr4:89414193 chr4:89414196 nonsynonymous SNV 0.174 0 24 hm5C_associated_SNPs_89576 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:89414181-89414204
64251 chr4 25929958 25929958 1 + G A UCEC 25929955 + 25929935 25929975 41 AGAAGGAACAAGCTATAAATCGGGCTGGAATTGTTCAAGAG AGAAGGAACAAGCTATAAATCGGACTGGAATTGTTCAAGAG < 41bp 0.770564399486402 0.560233610445751 0.9348684 0.910505 prediction 0.420661578081302 Functional Loss - SMIM20 ENSG00000250317 CDS Human protein_coding chr4:25929955 chr4:25929958 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_89578 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr4:25929937-25929970
64251 chr3 9802446 9802446 1 - G A GBM 9802449 - 9802429 9802469 41 AGTTTCTCCCTGCCCAGGCTCTGCGGTTACCCTCCCTTCTA AGTTTCTCCCTGCCCAGGCTCTGTGGTTACCCTCCCTTCTA < 41bp 0.744173832223153 0.533844184738453 0.043120593 0.010247648 prediction 0.420659294969401 Functional Loss - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9802449 chr3:9802446 synonymous SNV . 0 24 hm5C_associated_SNPs_89580 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:9802430-9802451
64251 chr1 116916056 116916056 1 + C T rs11540947 116916054 + 116916034 116916074 41 GGCTCCCCTGGTCCCGCTCGCTCGGCCGGGAGCTGCTCTGT GGCTCCCCTGGTCCCGCTCGCTTGGCCGGGAGCTGCTCTGT < 41bp 0.808818618991785 0.59849377360181 0.32811758 0.1333842 prediction 0.420649690779952 Functional Loss - ATP1A1 ENSG00000269279 CDS Human other chr1:116916054 chr1:116916056 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_89583 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:116915900-116916120
64251 chr4 56737307 56737307 1 + A C KIRP 56737306 + 56737286 56737326 41 AAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCT AAGGTCATATAAAGGCCCTTCCGGAAGGAGATCTTGCTTCT < 41bp 0.82414510764732 0.613821634214626 0.47944564 0.7041128 prediction 0.420646946865388 Functional Loss - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56737306 chr4:56737307 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_89584 0 0 2 BUD13 POSTAR2 ENCODE chr4:56737214-56737322
64251 chr19 1051971 1051971 1 + T C LIHC 1051970 + 1051950 1051990 41 TGATCCTCTCCACCCACCACCTGGATGAGGCAGAGCTGCTG TGATCCTCTCCACCCACCACCCGGATGAGGCAGAGCTGCTG < 41bp 0.710317591435773 0.459758318585069 0.21358916 0.29819077 prediction 0.420635182871545 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1051970 chr19:1051971 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_89590 0 0 3 DDX3X POSTAR2 ENCODE chr19:1051950-1052015
64251 chr1 38265666 38265666 1 + C T UCEC 38265663 + 38265643 38265683 41 GCAAGTACTATGAGACGGCCCTGCAGGCGGCCCTGACAGTG GCAAGTACTATGAGACGGCCCTGTAGGCGGCCCTGACAGTG < 41bp 0.771185104729672 0.560867967368071 0.1541973 0.1504268 prediction 0.420634274723202 Functional Loss - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265663 chr1:38265666 stopgain 1.000 1 24 hm5C_associated_SNPs_89591 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:38265654-38265692
64251 chr19 37441761 37441761 1 + G A UCEC 37441758 + 37441738 37441778 41 TGAATGTGGTAAAGCCTTCTCTCGAATCTCATCCCTCACTC TGAATGTGGTAAAGCCTTCTCTCAAATCTCATCCCTCACTC < 41bp 0.791250785923488 0.580936183214667 0.91142 0.41403806 prediction 0.420629205417641 Functional Loss - ZNF568 ENSG00000198453 CDS Human protein_coding chr19:37441758 chr19:37441761 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_89592 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:37441761-37441784
64251 chr12 69652741 69652741 1 + C T UCEC 69652738 + 69652718 69652758 41 CAGGTGCCCCACCGCCAGCTCCGCATGTGAACCCAGCTTTC CAGGTGCCCCACCGCCAGCTCCGTATGTGAACCCAGCTTTC < 41bp 0.710313411253441 0.489117537501867 0.29000536 0.34408364 prediction 0.420626822506881 Functional Loss - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652738 chr12:69652741 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89594 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:69652718-69652872
64251 chr7 99717419 99717419 1 + G C LUAD 99717418 + 99717398 99717438 41 TTCCTTTTTTTGGCCGTGCACGAGGCTTGGGCTGGGATGTT TTCCTTTTTTTGGCCGTGCACCAGGCTTGGGCTGGGATGTT < 41bp 0.710311240127744 0.392097475566444 0.89009434 0.47425973 prediction 0.420622480255489 Functional Loss - CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99717418 chr7:99717419 nonsynonymous SNV 0.118 0 22 hm5C_associated_SNPs_89596 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:99717400-99717420
64251 chr2 71360485 71360485 1 + C T OV 71360482 + 71360462 71360502 41 TTGATATCAGCAAATTGGAACAGCAGAGCAAGGTGCAAAAC TTGATATCAGCAAATTGGAACAGTAGAGCAAGGTGCAAAAC < 41bp 0.754296765556493 0.543990765529348 0.23851559 0.11346573 prediction 0.420612000054289 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71360482 chr2:71360485 stopgain 0.050 1 24 hm5C_associated_SNPs_89599 0 0 1 RBM15 POSTAR2 ENCODE chr2:71360455-71360514
64251 chr8 87474063 87474063 1 + G A COAD 87474060 + 87474040 87474080 41 TGGCAAAGACACTTGGTTACCAAGAAGCCATACATGGTAAG TGGCAAAGACACTTGGTTACCAAAAAGCCATACATGGTAAG < 41bp 0.760701988778548 0.550397463014743 0.4178827 0.9000565 prediction 0.42060905152761 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87474060 chr8:87474063 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_89601 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:87474034-87474073
64251 chr7 150069908 150069908 1 + G A SKCM 150069905 + 150069885 150069925 41 GACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCAC GACTGCGACCGCAGCTTCAGCCAAAAGTCCAACCTCATCAC < 41bp 0.823696366280868 0.613394002347629 0.30971643 0.039065182 prediction 0.420604727866477 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069905 chr7:150069908 synonymous SNV . 0 24 hm5C_associated_SNPs_89602 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:150069900-150070020
64251 chr11 554389 554389 1 + G A rs11246183 554386 + 554366 554406 41 TTGGGGGGTGGAAGGAGTGCCTGGCCCTGGGGAGGACCCTC TTGGGGGGTGGAAGGAGTGCCTGACCCTGGGGAGGACCCTC < 41bp 0.71030192961766 0.45565006216123 0.6750528 0.7742622 prediction 0.42060385923532 Functional Loss - LRRC56 ENSG00000161328 UTR3 Human protein_coding chr11:554386 chr11:554389 . . 0 24 hm5C_associated_SNPs_89603 0 0 8 AKAP8L POSTAR2 ENCODE chr11:554374-554419
64251 chr2 190531197 190531197 1 + A C rs143704216 190531196 + 190531176 190531216 41 TGAGATTTTGTCACTCTTCTCAGAAGTACAAGGTCCCTGGT TGAGATTTTGTCACTCTTCTCCGAAGTACAAGGTCCCTGGT < 41bp 0.831727141013718 0.621428894676653 0.90708053 0.6893356 prediction 0.420596492674129 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531196 chr2:190531197 synonymous SNV . 0 22 hm5C_associated_SNPs_89606 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:190531175-190531213
64251 chr19 4433137 4433137 1 + G T LUAD 4433135 + 4433115 4433155 41 AGGTCATCATCCGGGAGTTCCAGGAGCACTGCCGCCGGGGA AGGTCATCATCCGGGAGTTCCATGAGCACTGCCGCCGGGGA < 41bp 0.919551637156539 0.709255650315404 0.94443804 0.44411883 prediction 0.42059197368227 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4433135 chr19:4433137 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_89607 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:4433100-4433138
64251 chr15 59408907 59408907 1 + A T KIRC 59408903 + 59408883 59408923 41 CATTAGGTTCAGCCAGTTTCCCGGAAGAAGCTTCAATTAGT CATTAGGTTCAGCCAGTTTCCCGGTAGAAGCTTCAATTAGT < 41bp 0.710294881590975 0.389138655248298 0.39647102 0.28325474 prediction 0.420589763181949 Functional Loss - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59408903 chr15:59408907 stopgain 0.812 1 25 hm5C_associated_SNPs_89608 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr15:59408886-59408910
64251 chr5 36677083 36677083 1 + G C rs2032892 36677079 + 36677059 36677099 41 TGCTGTGATAAACAATGTGTCTGAGGCCATGGAGACTCTTA TGCTGTGATAAACAATGTGTCTGACGCCATGGAGACTCTTA < 41bp 0.710292911203099 0.412524868700502 0.14250669 0.04147601 prediction 0.420585822406198 Functional Loss - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677079 chr5:36677083 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_89611 2 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:36677065-36677102
64251 chr19 35556465 35556465 1 + G A SKCM 35556462 + 35556442 35556482 41 GGCCAACAGGCCGGGGTACTCCAGGAGGCTCGAGTCCCCAT GGCCAACAGGCCGGGGTACTCCAAGAGGCTCGAGTCCCCAT < 41bp 0.813561793308043 0.603277205641272 0.9285139 0.90367365 prediction 0.420569175333542 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35556462 chr19:35556465 synonymous SNV . 0 24 hm5C_associated_SNPs_89619 0 0 1 PRPF8 POSTAR2 ENCODE chr19:35556416-35556482
64251 chr3 32750266 32750266 1 + A C COAD 32750262 + 32750242 32750282 41 TTATCATCTGCGGCAGTATACAGAAGCCATATCAGTTGGTG TTATCATCTGCGGCAGTATACAGACGCCATATCAGTTGGTG < 41bp 0.710282217856547 0.30977568010891 0.24165502 0.2461249 prediction 0.420564435713095 Functional Loss - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32750262 chr3:32750266 nonsynonymous SNV 0.987 2 25 hm5C_associated_SNPs_89622 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:32750264-32750301
64251 chr1 15545933 15545933 1 + G A LUSC 15545930 + 15545910 15545950 41 GCAAGGGGAGAGGAGCAGAACCCGAGGTTGAGCATCTCTCT GCAAGGGGAGAGGAGCAGAACCCAAGGTTGAGCATCTCTCT < 41bp 0.710276743917896 0.471473484629649 0.8921184 0.44368306 prediction 0.420553487835791 Functional Loss - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15545930 chr1:15545933 synonymous SNV . 0 24 hm5C_associated_SNPs_89626 0 0 2 SND1 POSTAR2 ENCODE chr1:15545909-15545951
64251 chr19 37854220 37854220 1 + G A BRCA 37854217 + 37854197 37854237 41 GGAGTGTGGGCGAGGCTTTACCCGGAAATCAACCCTGAGCA GGAGTGTGGGCGAGGCTTTACCCAGAAATCAACCCTGAGCA < 41bp 0.710272248581775 0.453917089843263 0.25124347 0.044048876 prediction 0.420544497163549 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854217 chr19:37854220 nonsynonymous SNV 0.975 0 24 hm5C_associated_SNPs_89630 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37854188-37854295
64251 chr2 220368858 220368858 1 + C T UCEC 220368855 + 220368835 220368875 41 TTTATCAGTGACATCATCAACTGCGGCATCTACCTCTTTTC TTTATCAGTGACATCATCAACTGTGGCATCTACCTCTTTTC < 41bp 0.740312634487831 0.530051591955279 0.42398697 0.29109877 prediction 0.420522085065104 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220368855 chr2:220368858 synonymous SNV . 0 24 hm5C_associated_SNPs_89636 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:220368833-220368869
64251 chrX 13778239 13778239 1 + G A CESC 13778236 + 13778216 13778256 41 GCTTTTTGTACCCTGCAGCCCTAGAGAATGAAGTGTACTGC GCTTTTTGTACCCTGCAGCCCTAAAGAATGAAGTGTACTGC < 41bp 0.783687893702601 0.573434341354289 0.16585827 0.15646213 prediction 0.420507104696624 Functional Loss - OFD1 ENSG00000046651 CDS Human protein_coding chrX:13778236 chrX:13778239 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89637 0 0 4 SF3B4 POSTAR2 ENCODE chrX:13778178-13778246
64251 chr19 18686847 18686847 1 + C T rs41293589 18686845 + 18686825 18686865 41 GTATTACAGGCGTGAGCCAGCACGCCTGGCCCAGTTACTCA GTATTACAGGCGTGAGCCAGCATGCCTGGCCCAGTTACTCA < 41bp 0.751875646805817 0.541624875339917 0.25826716 0.3441462 prediction 0.4205015429318 Functional Loss - UBA52 ENSG00000221983 UTR3 Human protein_coding chr19:18686845 chr19:18686847 . . 0 23 hm5C_associated_SNPs_89638 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:18686834-18686866
64251 chr20 43536455 43536455 1 + C T rs8356 43536453 + 43536433 43536473 41 TGTCTTCCTCCAGTTCTCAACACGGTGTTGCTCTTCAGTCA TGTCTTCCTCCAGTTCTCAACATGGTGTTGCTCTTCAGTCA < 41bp 0.742655610741112 0.53240568952891 0.8313195 0.44245002 prediction 0.420499842424405 Functional Loss - YWHAB ENSG00000166913 UTR3 Human protein_coding chr20:43536453 chr20:43536455 . . 0 23 hm5C_associated_SNPs_89639 0 1 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:43536335-43536561
64251 chrX 134987535 134987535 1 + G A BLCA 134987532 + 134987512 134987552 41 GCTGCAGCTGGTATTCCATCCATGAGTACCAGGGATCTGCG GCTGCAGCTGGTATTCCATCCATAAGTACCAGGGATCTGCG < 41bp 0.710242241283452 0.466732991363598 0.0439772 0.042667598 prediction 0.420484482566905 Functional Loss - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134987532 chrX:134987535 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_89645 0 0 3 PRPF8 POSTAR2 ENCODE chrX:134987518-134987704
64251 chr11 124502084 124502084 1 + C T ESCA 124502081 + 124502061 124502101 41 AACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA AACCCTTGGTAGATACTCACCTGTAGCACTTGAAGTCTCCA < 41bp 0.710240016063961 0.489360496370239 0.12531844 0.11802846 prediction 0.420480032127923 Functional Loss - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502081 chr11:124502084 stopgain 0.970 1 24 hm5C_associated_SNPs_89646 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:124502042-124502095
64251 chr22 19504062 19504062 1 + C T UCEC 19504059 + 19504039 19504079 41 CGACTCCATAGACAAAGAACCGGCGCTGCAAACTGCTGCCC CGACTCCATAGACAAAGAACCGGTGCTGCAAACTGCTGCCC < 41bp 0.713731636319889 0.503499628371699 0.6854631 0.9161612 prediction 0.420464015896381 Functional Loss - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19504059 chr22:19504062 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_89651 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:19504055-19504082
64251 chr11 65123630 65123630 1 + C T SKCM 65123627 + 65123607 65123647 41 GCCGATATCATGGGCCAGGACTTCGTGCCCAGCATCGGCTG GCCGATATCATGGGCCAGGACTTTGTGCCCAGCATCGGCTG < 41bp 0.717573480239315 0.507344700162304 0.22001746 0.22700873 prediction 0.420457560154023 Functional Loss - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123627 chr11:65123630 synonymous SNV . 0 24 hm5C_associated_SNPs_89655 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:65123620-65123640
64251 chr10 111985946 111985946 1 + G C rs35741140 111985945 + 111985925 111985965 41 GAGAAGGGAGTGCGGAGAGGCGCCGGTCGCCACCCGCGGTG GAGAAGGGAGTGCGGAGAGGCCCCGGTCGCCACCCGCGGTG < 41bp 0.880179084463531 0.669950306515381 0.44183132 0.29075855 prediction 0.420457555896301 Functional Loss - MXI1 ENSG00000119950 UTR5 Human protein_coding chr10:111985945 chr10:111985946 . . 0 22 hm5C_associated_SNPs_89656 0 0 2 CSTF2T POSTAR2 ENCODE chr10:111985890-111985961
64251 chr15 91026675 91026675 1 + C T COAD 91026672 + 91026652 91026692 41 CTTTGACATCATTGACCTGTCAGCAGGAGGCCAGCTTACCA CTTTGACATCATTGACCTGTCAGTAGGAGGCCAGCTTACCA < 41bp 0.76332263955672 0.553093965804797 0.39250657 0.16153619 prediction 0.420457347503848 Functional Loss - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:91026672 chr15:91026675 nonsynonymous SNV 0.917 1 24 hm5C_associated_SNPs_89657 0 0 9 FMR1 POSTAR2 ENCODE chr15:91026666-91026719
64251 chr6 118635199 118635199 1 + A T UCEC 118635195 + 118635175 118635215 41 TGTTGTGTTTTTTTAGTTTTCAGGACTTTATCTCCTGTCTT TGTTGTGTTTTTTTAGTTTTCAGGTCTTTATCTCCTGTCTT < 41bp 0.710228511923655 0.417162076558899 0.6507872 0.44068125 prediction 0.420457023847311 Functional Loss - SLC35F1 ENSG00000196376 CDS Human protein_coding chr6:118635195 chr6:118635199 synonymous SNV . 0 25 hm5C_associated_SNPs_89659 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:118635188-118635211
64251 chr12 6943202 6943202 1 + C T COAD 6943199 + 6943179 6943219 41 CAGCCGAGTGTGGGGTGCTGCTGCAGCTGGCTAAGGTAGGA CAGCCGAGTGTGGGGTGCTGCTGTAGCTGGCTAAGGTAGGA < 41bp 0.749943109746994 0.539714681268251 0.8131983 0.39208722 prediction 0.420456856957486 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943199 chr12:6943202 stopgain 1.000 1 24 hm5C_associated_SNPs_89660 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6943180-6943202
64251 chr4 134076151 134076151 1 + G A STAD 134076148 + 134076128 134076168 41 GTGAACAGGGAGATAGTGATCATGATGCCACCAACCGTGCC GTGAACAGGGAGATAGTGATCATAATGCCACCAACCGTGCC < 41bp 0.710225769362108 0.475020739074442 0.36353827 0.13610241 prediction 0.420451538724216 Functional Loss - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134076148 chr4:134076151 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_89663 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:134076126-134076160
64251 chr7 48146994 48146994 1 + C T rs116578494 48146992 + 48146972 48147012 41 GATGGGGCTCTCTGCTCCTACACGGAGAAGGACAAGCAGGC GATGGGGCTCTCTGCTCCTACATGGAGAAGGACAAGCAGGC < 41bp 0.848120943401171 0.637895188428119 0.40524113 0.82809174 prediction 0.420451509946105 Functional Loss - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48146992 chr7:48146994 nonsynonymous SNV 0.928 3 23 hm5C_associated_SNPs_89664 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:48146972-48146995
64251 chr7 128489420 128489420 1 + G T CESC 128489417 + 128489397 128489437 41 GCCCTCGAATCCAGATTGGGCAGGAGACGGTGATCACGGTG GCCCTCGAATCCAGATTGGGCAGTAGACGGTGATCACGGTG < 41bp 0.710224525606842 0.322757661830782 0.76778895 0.17269453 prediction 0.420449051213685 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128489417 chr7:128489420 stopgain 1.000 1 24 hm5C_associated_SNPs_89666 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr7:128489420-128489440
64251 chr4 141461344 141461344 1 + C T COAD 141461342 + 141461322 141461362 41 CTTTGGAATCTTCTAATGCCCACGAAGAAGTTAAACGCTAG CTTTGGAATCTTCTAATGCCCATGAAGAAGTTAAACGCTAG < 41bp 0.856182612662064 0.645959716557735 0.27742106 0.2981681 prediction 0.420445792208658 Functional Loss - ELMOD2 ENSG00000179387 CDS Human protein_coding chr4:141461342 chr4:141461344 nonsynonymous SNV 0.813 2 23 hm5C_associated_SNPs_89668 0 0 2 PPIG POSTAR2 ENCODE chr4:141461313-141461453
64251 chr17 2275737 2275737 1 + G A UCEC 2275734 + 2275714 2275754 41 GACCGGCCCCCGGGGGCCTCCGCGGGCCTCACCAAGGACGT GACCGGCCCCCGGGGGCCTCCGCAGGCCTCACCAAGGACGT < 41bp 0.822660029963574 0.612441995021781 0.9062531 0.87405396 prediction 0.420436069883586 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2275734 chr17:2275737 synonymous SNV . 0 24 hm5C_associated_SNPs_89675 0 0 1 GRWD1 POSTAR2 ENCODE chr17:2275672-2275745
64251 chr19 13879744 13879744 1 + C T ACC 13879741 + 13879721 13879761 41 AAGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCAGCTC AAGCACCATGGCATTCCCTTCTATGTGGCTGCCCCCAGCTC < 41bp 0.71021299020989 0.487895517369989 0.19962162 0.15568012 prediction 0.42042598041978 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879741 chr19:13879744 synonymous SNV . 0 24 hm5C_associated_SNPs_89677 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:13879732-13879783
64251 chrX 118377753 118377753 1 + G T rs774728252 118377751 + 118377731 118377771 41 AATCTCAAAACAGAGCTCAGCTGCAAAAAAGCATATTTTCT AATCTCAAAACAGAGCTCAGCTTCAAAAAAGCATATTTTCT < 41bp 0.710210637622424 0.405347070975229 0.1413652 0.05288285 prediction 0.420421275244848 Functional Loss - PGRMC1 ENSG00000101856 UTR3 Human protein_coding chrX:118377751 chrX:118377753 . . 0 23 hm5C_associated_SNPs_89680 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:118377345-118378417
64251 chr2 44547731 44547731 1 - C T ESCA 44547734 - 44547714 44547754 41 CAGTACACTGGAATAGCATGCTCGATTGGAAACAAAGCATC CAGTACACTGGAATAGCATGCTCAATTGGAAACAAAGCATC < 41bp 0.771407738703753 0.561199042275307 0.1568164 0.061465383 prediction 0.420417392856893 Functional Loss - SLC3A1 ENSG00000138079 CDS Human protein_coding chr2:44547734 chr2:44547731 stopgain 0.929 1 24 hm5C_associated_SNPs_89681 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:44547642-44547753
64251 chr2 136479529 136479529 1 + C T COAD 136479526 + 136479506 136479546 41 ATCCATTACTTGGCCAGCCACTGCAGTACAATCCTCCTGCT ATCCATTACTTGGCCAGCCACTGTAGTACAATCCTCCTGCT < 41bp 0.782793210577885 0.572590781764502 0.39588577 0.39893863 prediction 0.420404857626765 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136479526 chr2:136479529 stopgain 0.978 1 24 hm5C_associated_SNPs_89688 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr2:136479520-136479540
64251 chr10 43622132 43622132 1 + G A SKCM 43622129 + 43622109 43622149 41 CTGTAATAATGCCCCCCTCCCTCGAGCCCTCCCTTCCACAT CTGTAATAATGCCCCCCTCCCTCAAGCCCTCCCTTCCACAT < 41bp 0.800912427156987 0.590711454773264 0.069206476 0.0056813955 prediction 0.420401944767445 Functional Loss - RET ENSG00000165731 CDS Human protein_coding chr10:43622129 chr10:43622132 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_89692 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:43622113-43622155
64251 chr21 37748210 37748210 1 + C T rs80088522 37748208 + 37748188 37748228 41 GTTGTGCTGAGATTGCCAATCACGGTTAAACACAAAGTGTT GTTGTGCTGAGATTGCCAATCATGGTTAAACACAAAGTGTT < 41bp 0.710200176540998 0.472085891671856 0.3627903 0.4880206 prediction 0.420400353081997 Functional Loss - MORC3 ENSG00000159256 UTR3 Human protein_coding chr21:37748208 chr21:37748210 . . 0 23 hm5C_associated_SNPs_89694 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr21:37748157-37748211
64251 chr14 39815181 39815181 1 + T C COAD 39815180 + 39815160 39815200 41 TTCTAATTCTGGTAGACTGTCTGGACCAGCAGAACTCAGAA TTCTAATTCTGGTAGACTGTCCGGACCAGCAGAACTCAGAA < 41bp 0.819313085363041 0.60912201023692 0.14857602 0.09437445 prediction 0.420382150252241 Functional Loss - MIA2 ENSG00000150527;ENSG00000258941 CDS Human other chr14:39815180 chr14:39815181 synonymous SNV . 0 22 hm5C_associated_SNPs_89699 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:39815151-39815189
64251 chr19 35512503 35512503 1 + C T HNSC 35512500 + 35512480 35512520 41 GCGGCATTGAAGACTATTTCCACCATCTGGGTAGGGACAGA GCGGCATTGAAGACTATTTCCACTATCTGGGTAGGGACAGA < 41bp 0.774855055449797 0.564665812464823 0.028029263 0.024311483 prediction 0.42037848596995 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512500 chr19:35512503 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_89700 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:35512469-35512504
64251 chr10 13158340 13158340 1 + C T UCEC 13158338 + 13158318 13158358 41 ACGAGAACAGTCTCCACTGGCACGTATGTGAAGGAAGACTC ACGAGAACAGTCTCCACTGGCATGTATGTGAAGGAAGACTC < 41bp 0.710189108770257 0.43961336068762 0.41281006 0.4142528 prediction 0.420378217540514 Functional Loss - OPTN ENSG00000123240 CDS Human protein_coding chr10:13158338 chr10:13158340 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_89701 0 0 1 EFTUD2 POSTAR2 ENCODE chr10:13158332-13158392
64251 chr5 140595974 140595974 1 + G T SARC 140595971 + 140595951 140595991 41 GGTGTGTCTGGCAGGAGGCTCAGGGACCAATGAGTTCAAGT GGTGTGTCTGGCAGGAGGCTCAGTGACCAATGAGTTCAAGT < 41bp 0.710184223859452 0.316025764852256 0.8929858 0.34138045 prediction 0.420368447718904 Functional Loss - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595971 chr5:140595974 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_89703 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:140595945-140595984
64251 chrX 150158485 150158485 1 + G A rs151157696 150158482 + 150158462 150158502 41 AACTCGGTTGTGAGGTTTGCCCAGAGGCACTTGTTCCAGAA AACTCGGTTGTGAGGTTTGCCCAAAGGCACTTGTTCCAGAA < 41bp 0.722772169425773 0.512588424119426 0.43082073 0.09039861 prediction 0.420367490612694 Functional Loss - HMGB3 ENSG00000029993 UTR3 Human protein_coding chrX:150158482 chrX:150158485 . . 0 24 hm5C_associated_SNPs_89704 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chrX:150158393-150158488
64251 chr1 166819191 166819191 1 + G T UCEC 166819189 + 166819169 166819209 41 AGTGGTGTGGAGACGGAGGACAGGAGCAGTGCCCAAGCAGC AGTGGTGTGGAGACGGAGGACATGAGCAGTGCCCAAGCAGC < 41bp 0.91091580851575 0.700737352478089 0.75096464 0.4545624 prediction 0.420356912075323 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166819189 chr1:166819191 stopgain 0.240 1 23 hm5C_associated_SNPs_89710 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:166819137-166819215
64251 chr9 34656902 34656902 1 + G A UCEC 34656899 + 34656879 34656919 41 GGGGCACAGTGACCCTGCAGCTGGGCTGTGAGTTGGGGAGG GGGGCACAGTGACCCTGCAGCTGAGCTGTGAGTTGGGGAGG < 41bp 0.802858973241903 0.592683448615456 0.5123841 0.3374558 prediction 0.420351049252894 Functional Loss - IL11RA ENSG00000137070;ENSG00000258728 CDS Human other chr9:34656899 chr9:34656902 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89712 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:34656861-34656926
64251 chr22 44543790 44543790 1 + C T COAD 44543787 + 44543767 44543807 41 GACCACGCCCCGGATAAGCTCAGCGTGGTGAAGAAGGTGAG GACCACGCCCCGGATAAGCTCAGTGTGGTGAAGAAGGTGAG < 41bp 0.736198863293338 0.526027349313895 0.8780714 0.5128682 prediction 0.420343027958884 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44543787 chr22:44543790 synonymous SNV . 0 24 hm5C_associated_SNPs_89715 0 0 1 BUD13 POSTAR2 ENCODE chr22:44543732-44543808
64251 chr17 33324773 33324773 1 + C T LUSC 33324770 + 33324750 33324790 41 TCCTCAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGAC TCCTCAGACCTCTGTGTGAGCGGTGGAAGTTTCTTCATGAC < 41bp 0.712951377039883 0.502786786913945 0.7944548 0.4229252 prediction 0.420329180251877 Functional Loss - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33324770 chr17:33324773 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_89719 0 0 2 PPIG POSTAR2 ENCODE chr17:33324754-33324848
64251 chr19 45561135 45561135 1 + G T STAD 45561131 + 45561111 45561151 41 GAGGAGGAGAGCAACTCGGACGAAGATGAGGTCATCCCCGA GAGGAGGAGAGCAACTCGGACGAATATGAGGTCATCCCCGA < 41bp 0.711772120890321 0.501609169065144 0.6013706 0.5920052 prediction 0.420325903650353 Functional Loss - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45561131 chr19:45561135 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_89720 0 0 9 BUD13 POSTAR2 ENCODE chr19:45561102-45561155
64251 chr20 44574995 44574995 1 + G A LUAD 44574992 + 44574972 44575012 41 GCCAGTACTGTTCTGCCTTCCCCGACACAGACGGCTACTTT GCCAGTACTGTTCTGCCTTCCCCAACACAGACGGCTACTTT < 41bp 0.710160341048274 0.469687786177474 0.035726875 0.06989235 prediction 0.420320682096548 Functional Loss - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44574992 chr20:44574995 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_89722 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:44574988-44575013
64251 chr21 35468712 35468712 1 + G T SARC 35468710 + 35468690 35468730 41 TCCGCAAGAGCGCAAGCTCCCGGGAGTTAATGATTGTGGGG TCCGCAAGAGCGCAAGCTCCCGTGAGTTAATGATTGTGGGG < 41bp 0.907666434485067 0.697506419149881 0.9303219 0.26506448 prediction 0.420320030670373 Functional Loss - SLC5A3 ENSG00000198743;ENSG00000272962 CDS Human other chr21:35468710 chr21:35468712 synonymous SNV . 0 23 hm5C_associated_SNPs_89723 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr21:35468681-35468719
64251 chr19 15752390 15752390 1 + G A SKCM 15752387 + 15752367 15752407 41 CTCCGGTGTTTCCCGCAACCCCCGAAACGGAATTGGTTCTT CTCCGGTGTTTCCCGCAACCCCCAAAACGGAATTGGTTCTT < 41bp 0.710156138793262 0.472600221624052 0.04479134 0.06958988 prediction 0.420312277586524 Functional Loss - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15752387 chr19:15752390 synonymous SNV . 0 24 hm5C_associated_SNPs_89725 0 0 3 GRWD1 POSTAR2 ENCODE chr19:15752328-15752397
64251 chrX 65390434 65390434 1 + T C HNSC 65390433 + 65390413 65390453 41 ATGGAGTCAGGCCACCTCCTCTGGGCTCTGCTGTTCATGCA ATGGAGTCAGGCCACCTCCTCCGGGCTCTGCTGTTCATGCA < 41bp 0.710152512437401 0.48147147217863 0.70762247 0.8914222 prediction 0.420305024874803 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65390433 chrX:65390434 nonsynonymous SNV 0.881 1 22 hm5C_associated_SNPs_89730 0 0 2 RPS3 POSTAR2 ENCODE chrX:65390413-65390462
64251 chr11 65734003 65734003 1 + C T COAD 65734000 + 65733980 65734020 41 ACAGTGGGGCCCCGGCTGGCCTCCGAATACCTCACGCCTGA ACAGTGGGGCCCCGGCTGGCCTCTGAATACCTCACGCCTGA < 41bp 0.730787436940846 0.520635358038771 0.32477066 0.094982445 prediction 0.42030415780415 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65734000 chr11:65734003 synonymous SNV . 0 24 hm5C_associated_SNPs_89733 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65733988-65734015
64251 chr7 30811168 30811168 1 + G T UCEC 30811166 + 30811146 30811186 41 TTGGTCAGGGAGTTCCTCAGCAGAAAGGTAACGGCTCGCCC TTGGTCAGGGAGTTCCTCAGCATAAAGGTAACGGCTCGCCC < 41bp 0.710146530867963 0.355184660139772 0.43363923 0.1828227 prediction 0.420293061735926 Functional Loss - MINDY4 ENSG00000106125 CDS Human protein_coding chr7:30811166 chr7:30811168 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_89736 0 0 1 DDX3X POSTAR2 ENCODE chr7:30811045-30811173
64251 chr17 55055575 55055575 1 + C T COAD 55055573 + 55055553 55055593 41 GCGGTGGTTGCTGCTGCTGCCGCTGCTGCTGGGCCTGAACG GCGGTGGTTGCTGCTGCTGCCGTTGCTGCTGGGCCTGAACG < 41bp 0.710143513971436 0.477789717045605 0.2788825 0.097717404 prediction 0.420287027942873 Functional Loss - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55055573 chr17:55055575 synonymous SNV . 0 23 hm5C_associated_SNPs_89738 0 0 3 DDX3X POSTAR2 ENCODE chr17:55055528-55055594
64251 chr1 233490632 233490632 1 + G T COAD 233490629 + 233490609 233490649 41 GTCCATCGTTTGCCTTAATTCTCGAACAGTTGACTGCTATT GTCCATCGTTTGCCTTAATTCTCTAACAGTTGACTGCTATT < 41bp 0.710142696666472 0.328132793415985 0.89808095 0.94091517 prediction 0.420285393332945 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233490629 chr1:233490632 stopgain 0.591 0 24 hm5C_associated_SNPs_89740 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:233490583-233490644
64251 chr11 64950658 64950658 1 + G T UCEC 64950656 + 64950636 64950676 41 CTACCCGCACAGACATCTGCCAGGGAGCACTGGGTAGGCCC CTACCCGCACAGACATCTGCCATGGAGCACTGGGTAGGCCC < 41bp 0.710138962145583 0.344760464961894 0.91295946 0.34163845 prediction 0.420277924291165 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950656 chr11:64950658 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_89741 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:64950624-64950660
64251 chr16 1741891 1741891 1 + C T UCEC 1741889 + 1741869 1741909 41 CGAATCAACCCCCGTGCAGACTCGACAGCACCTGAACCCAC CGAATCAACCCCCGTGCAGACTTGACAGCACCTGAACCCAC < 41bp 0.880413602261741 0.670279004324903 0.10067773 0.016192019 prediction 0.420269195873676 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1741889 chr16:1741891 stopgain 0.848 0 23 hm5C_associated_SNPs_89747 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:1741860-1741900
64251 chr18 8798172 8798172 1 + C T STAD 8798170 + 8798150 8798190 41 ACCAGGCGGATGGCCCAGACCACGACAGTGACCGAGGCTGT ACCAGGCGGATGGCCCAGACCATGACAGTGACCGAGGCTGT < 41bp 0.855213037311451 0.645078449946122 0.33088434 0.35888305 prediction 0.420269174730658 Functional Loss - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8798170 chr18:8798172 synonymous SNV . 0 23 hm5C_associated_SNPs_89748 0 0 1 SUB1 POSTAR2 ENCODE chr18:8798094-8798174
64251 chr8 104427284 104427284 1 - G A BLCA 104427286 - 104427266 104427306 41 GCCTTGGGCATAAGAGTCCTCTCGTTGGTCCCGGAGGTGGG GCCTTGGGCATAAGAGTCCTCTTGTTGGTCCCGGAGGTGGG < 41bp 0.762185637992541 0.552072872123623 0.099196225 0.08733198 prediction 0.420225531737836 Functional Loss - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104427286 chr8:104427284 synonymous SNV . 0 23 hm5C_associated_SNPs_89758 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:104427263-104427294
64251 chr2 219614006 219614006 1 + G A LGG 219614003 + 219613983 219614023 41 CCCTATGTGACCAGCCTGCTCAAGATGTATGTGCGACGGCC CCCTATGTGACCAGCCTGCTCAAAATGTATGTGCGACGGCC < 41bp 0.815358991742239 0.605249643819733 0.86667895 0.47802433 prediction 0.420218695845012 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219614003 chr2:219614006 synonymous SNV . 0 24 hm5C_associated_SNPs_89760 0 0 3 GRWD1 POSTAR2 ENCODE chr2:219613985-219614110
64251 chr17 80014563 80014563 1 + C T STAD 80014560 + 80014540 80014580 41 GATGGCGGCAGCCTTCAATACCACGGTGGCCGCCCTGGAGG GATGGCGGCAGCCTTCAATACCATGGTGGCCGCCCTGGAGG < 41bp 0.71651524938549 0.50640596551625 0.86077386 0.65681154 prediction 0.420218567738482 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80014560 chr17:80014563 nonsynonymous SNV 0.413 4 24 hm5C_associated_SNPs_89761 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:80014556-80014612
64251 chr3 42955928 42955928 1 + G T UCEC 42955926 + 42955906 42955946 41 GACCCCAGTGGTGTGGATCCCAGGAATTATGGTTTGGGAAA GACCCCAGTGGTGTGGATCCCATGAATTATGGTTTGGGAAA < 41bp 0.909402787041094 0.699296716904156 0.7672684 0.2703306 prediction 0.420212140273877 Functional Loss - ZNF662 ENSG00000182983 CDS Human protein_coding chr3:42955926 chr3:42955928 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_89763 0 0 1 DGCR8 POSTAR2 ENCODE chr3:42955905-42955937
64251 chrX 47442935 47442935 1 + G A UCEC 47442932 + 47442912 47442952 41 CGGCCTTCTGCAATTCCGACCTCGGTGAGTCCTCACCCCAC CGGCCTTCTGCAATTCCGACCTCAGTGAGTCCTCACCCCAC < 41bp 0.715991137015279 0.505897289866954 0.2724901 0.27565345 prediction 0.42018769429665 Functional Loss - TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47442932 chrX:47442935 nonsynonymous SNV 0.148 5 24 hm5C_associated_SNPs_89768 0 0 2 YBX3 POSTAR2 ENCODE chrX:47442931-47442935
64251 chr2 3691606 3691606 1 + C T PRAD 3691603 + 3691583 3691623 41 GGTGAGCCCAACAATGCCTACGACGAGGAGGACTGCGTGGA GGTGAGCCCAACAATGCCTACGATGAGGAGGACTGCGTGGA < 41bp 0.722501519932116 0.512408696541377 0.067094326 0.07127479 prediction 0.420185646781477 Functional Loss - COLEC11 ENSG00000118004 CDS Human protein_coding chr2:3691603 chr2:3691606 synonymous SNV . 0 24 hm5C_associated_SNPs_89770 0 0 1 FBL POSTAR2 GSE43666,GSM1067864 chr2:3691584-3691619
64251 chr17 70118996 70118996 1 + G T COAD 70118994 + 70118974 70119014 41 GAAGAACGGGCAGGCGGAGGCAGAGGAGGCCACGGAGCAGA GAAGAACGGGCAGGCGGAGGCATAGGAGGCCACGGAGCAGA < 41bp 0.919640259718474 0.709548831595241 0.9101334 0.8899195 prediction 0.420182856246467 Functional Loss - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70118994 chr17:70118996 stopgain 1.000 1 23 hm5C_associated_SNPs_89771 0 0 3 GRWD1 POSTAR2 ENCODE chr17:70118927-70119003
64251 chr10 76154015 76154015 1 + C T UCEC 76154012 + 76153992 76154032 41 GCCCATGTGGATGCTCATTACTACGAGCAGAATGAGCAGCC GCCCATGTGGATGCTCATTACTATGAGCAGAATGAGCAGCC < 41bp 0.710584822998751 0.500495526224681 0.29673448 0.28867656 prediction 0.42017859354814 Functional Loss - ADK ENSG00000156110 CDS Human protein_coding chr10:76154012 chr10:76154015 synonymous SNV . 0 24 hm5C_associated_SNPs_89772 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:76153981-76154016
64251 chr11 47304014 47304014 1 + C T LGG 47304012 + 47303992 47304032 41 GCGTACCCTGCGCCTCTTTCCTCGGCCTGTGGTAGCTTTTC GCGTACCCTGCGCCTCTTTCCTTGGCCTGTGGTAGCTTTTC < 41bp 0.710088479009547 0.432528187046529 0.85418886 0.43359596 prediction 0.420176958019094 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47304012 chr11:47304014 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_89773 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:47303994-47304018
64251 chr11 47304015 47304015 1 + G A SKCM 47304012 + 47303992 47304032 41 GCGTACCCTGCGCCTCTTTCCTCGGCCTGTGGTAGCTTTTC GCGTACCCTGCGCCTCTTTCCTCAGCCTGTGGTAGCTTTTC < 41bp 0.710088479009547 0.472487979436625 0.85418886 0.3524708 prediction 0.420176958019094 Functional Loss - MADD ENSG00000110514 CDS Human protein_coding chr11:47304012 chr11:47304015 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89774 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:47303994-47304018
64251 chr16 72141429 72141429 1 + G A UCEC 72141426 + 72141406 72141446 41 CTATGTATCAGCTCTGGATCCTCGGGGCCCTGGACAACACA CTATGTATCAGCTCTGGATCCTCAGGGCCCTGGACAACACA < 41bp 0.809603911709918 0.599515791038856 0.479562 0.08219215 prediction 0.420176241342125 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141426 chr16:72141429 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_89776 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr16:72141404-72141435
64251 chr19 580458 580458 1 + C T BLCA 580455 + 580435 580475 41 TGGGCACGGCCAACATCCAGCTCCACGGTGAGTCCTGCAGC TGGGCACGGCCAACATCCAGCTCTACGGTGAGTCCTGCAGC < 41bp 0.713260650068453 0.503175394150446 0.6309438 0.6360297 prediction 0.420170511836014 Functional Loss - BSG ENSG00000172270 CDS Human protein_coding chr19:580455 chr19:580458 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_89779 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:580430-580461
64251 chr19 11101924 11101924 1 + C T COAD 11101922 + 11101902 11101942 41 GCAGCAAGCGCCAGTCCCTGCGCGAGGCCCGCATCACTGAG GCAGCAAGCGCCAGTCCCTGCGTGAGGCCCGCATCACTGAG < 41bp 0.84160971172973 0.631526637003513 0.58036214 0.33774784 prediction 0.420166149452436 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11101922 chr19:11101924 synonymous SNV . 0 23 hm5C_associated_SNPs_89780 1 0 4 FMR1 POSTAR2 ENCODE chr19:11101913-11101935
64251 chr9 131749135 131749135 1 + G A BLCA 131749132 + 131749112 131749152 41 ATGCGATACTGAACCTGTGCCACGAGACAGACCTGCACAGC ATGCGATACTGAACCTGTGCCACAAGACAGACCTGCACAGC < 41bp 0.710082018573582 0.466836912869035 0.22735769 0.30384356 prediction 0.420164037147165 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131749132 chr9:131749135 nonsynonymous SNV 0.529 3 24 hm5C_associated_SNPs_89781 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131749097-131749135
64251 chr9 131749134 131749134 1 + C T PAAD 131749132 + 131749112 131749152 41 ATGCGATACTGAACCTGTGCCACGAGACAGACCTGCACAGC ATGCGATACTGAACCTGTGCCATGAGACAGACCTGCACAGC < 41bp 0.710082018573582 0.419956227568048 0.22735769 0.272124 prediction 0.420164037147165 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131749132 chr9:131749134 synonymous SNV . 0 23 hm5C_associated_SNPs_89782 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr9:131749088-131749134
64251 chr16 28844517 28844517 1 + G A BRCA 28844514 + 28844494 28844534 41 ATGGGGTCTCCCGTCTCCTCCAAGACAGAGTCCGTATCGGA ATGGGGTCTCCCGTCTCCTCCAAAACAGAGTCCGTATCGGA < 41bp 0.710078860121586 0.460336144935465 0.19708437 0.1314744 prediction 0.420157720243171 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844514 chr16:28844517 synonymous SNV . 0 24 hm5C_associated_SNPs_89783 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28844448-28844518
64251 chr6 90572716 90572716 1 + G A UCEC 90572713 + 90572693 90572733 41 GTGTAAACAGTCATAGTTTTCAAGATGGAAGATGTCCATCT GTGTAAACAGTCATAGTTTTCAAAATGGAAGATGTCCATCT < 41bp 0.716990934093197 0.506920921900758 0.38752553 0.114438415 prediction 0.420140024384879 Functional Loss - CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90572713 chr6:90572716 . 0.225 0 24 hm5C_associated_SNPs_89786 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:90572681-90572716
64251 chr9 116999295 116999295 1 + G A UCEC 116999292 + 116999272 116999312 41 GTTGCCAGGGTTCCCCGGTGCACGGGGGAAGCCAGGGCCTC GTTGCCAGGGTTCCCCGGTGCACAGGGGAAGCCAGGGCCTC < 41bp 0.710065807813635 0.467832907527039 0.6161711 0.3294924 prediction 0.42013161562727 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116999292 chr9:116999295 nonsynonymous SNV 0.815 3 24 hm5C_associated_SNPs_89789 0 0 18 BUD13 POSTAR2 ENCODE chr9:116999260-116999305
64251 chr16 56866231 56866231 1 + G T LUSC 56866227 + 56866207 56866247 41 TTGAACCAAGTGTGTTTTGACGACGATGGCACCAGCTCCCC TTGAACCAAGTGTGTTTTGACGACTATGGCACCAGCTCCCC < 41bp 0.711695304596699 0.501634007435476 0.2903701 0.09569454 prediction 0.420122594322447 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56866227 chr16:56866231 nonsynonymous SNV 0.915 2 25 hm5C_associated_SNPs_89791 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr16:56866209-56866235
64251 chr20 39728838 39728838 1 + T C UCEC 39728837 + 39728817 39728857 41 ACCACCCCAAGATGGGCATGCTGAAGAGACGAATCATGCCC ACCACCCCAAGATGGGCATGCCGAAGAGACGAATCATGCCC < 41bp 0.839346052706016 0.629285031881544 0.15740484 0.18856707 prediction 0.420122041648945 Functional Loss - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39728837 chr20:39728838 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_89792 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr20:39728820-39728840
64251 chr15 49575840 49575840 1 + C T SKCM 49575837 + 49575817 49575857 41 GGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAA GGAGCAGTGTTTGTGATTGCCAATAGTTGTGTGGAGATGAA < 41bp 0.755687722218818 0.545643315944229 0.21737072 0.24669024 prediction 0.420088812549178 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49575837 chr15:49575840 synonymous SNV . 0 24 hm5C_associated_SNPs_89800 0 0 2 DDX24 POSTAR2 ENCODE chr15:49575837-49575916
64251 chrX 153670014 153670014 1 + G A BLCA 153670011 + 153669991 153670031 41 ATCTGTGACCCCAGCTACATCCCGGACCGTGTGCGGAAGGC ATCTGTGACCCCAGCTACATCCCAGACCGTGTGCGGAAGGC < 41bp 0.734018723828225 0.523974732195815 0.16470793 0.05861345 prediction 0.420087983264821 Functional Loss - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153670011 chrX:153670014 synonymous SNV . 0 24 hm5C_associated_SNPs_89801 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chrX:153669981-153670033
64251 chr5 162868318 162868318 1 + G A UCEC 162868315 + 162868295 162868335 41 AACTGTATTATTCACTCCTTCAAGAGAACTTGCCACTTGAA AACTGTATTATTCACTCCTTCAAAAGAACTTGCCACTTGAA < 41bp 0.768690825434497 0.558655197953722 0.38044006 0.2132155 prediction 0.420071254961549 Functional Loss - CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162868315 chr5:162868318 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_89806 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:162868299-162868320
64251 chrX 152034434 152034434 1 + C T LGG 152034431 + 152034411 152034451 41 ATCCGCCCTCATGGCATTTTCGGCCCAAGGGACCCGCAGTT ATCCGCCCTCATGGCATTTTCGGTCCAAGGGACCCGCAGTT < 41bp 0.714435200404519 0.504400838140675 0.64623547 0.28481743 prediction 0.420068724527688 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152034431 chrX:152034434 synonymous SNV . 0 24 hm5C_associated_SNPs_89808 0 0 3 GRWD1 POSTAR2 ENCODE chrX:152034430-152034486
64251 chr10 95279477 95279477 1 + C T UCEC 95279475 + 95279455 95279495 41 TAGACTTTGAAAATGAAAAACTCGACCGTCAACATGTGCAG TAGACTTTGAAAATGAAAAACTTGACCGTCAACATGTGCAG < 41bp 0.710025983303434 0.404032707212512 0.07882494 0.025968194 prediction 0.420051966606868 Functional Loss - CEP55 ENSG00000138180 CDS Human protein_coding chr10:95279475 chr10:95279477 synonymous SNV . 0 23 hm5C_associated_SNPs_89810 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:95279472-95279490
64251 chr1 228363051 228363051 1 + C T CESC 228363049 + 228363029 228363069 41 GGTGCCACGGTGCTGACTGCCTCAGGACAGACTGTGGGCAA GGTGCCACGGTGCTGACTGCCTTAGGACAGACTGTGGGCAA < 41bp 0.828604670629998 0.61858089155167 0.038260847 0.034338027 prediction 0.420047558156655 Functional Loss - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228363049 chr1:228363051 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_89811 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:228363040-228363060
64251 chr10 121411261 121411261 1 + G A BLCA 121411258 + 121411238 121411278 41 TGACCGCGACCCTTTGCCCCCCGGATGGGAGATCAAGATCG TGACCGCGACCCTTTGCCCCCCGAATGGGAGATCAAGATCG < 41bp 0.807935576324206 0.5979140103361 0.15826929 0.037419528 prediction 0.420043131976212 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121411258 chr10:121411261 nonsynonymous SNV 0.986 5 24 hm5C_associated_SNPs_89813 0 0 3 TARBP2 POSTAR2 GSE49648,GSM1204357 chr10:121411260-121411280
64251 chr2 120934906 120934906 1 + G A rs545974053 120934903 + 120934883 120934923 41 TGAGAAGCAGGCTGGTGAGACTGGGCTGAGGTTGGAGAAGG TGAGAAGCAGGCTGGTGAGACTGAGCTGAGGTTGGAGAAGG < 41bp 0.788181976690036 0.578162443769685 0.76959383 0.45179904 prediction 0.420039065840703 Functional Loss - EPB41L5 ENSG00000224789 ncRNA_intronic Human antisense chr2:120934903 chr2:120934906 . . 0 24 hm5C_associated_SNPs_89814 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:120934887-120934917
64251 chr4 184366205 184366205 1 + C T LAML 184366203 + 184366183 184366223 41 TTTCCATGGCCTGGGCGAACCACGTCTTCCTCGGGTGCCGG TTTCCATGGCCTGGGCGAACCATGTCTTCCTCGGGTGCCGG < 41bp 0.79473574177804 0.584717566868067 0.25591233 0.1983552 prediction 0.420036349819945 Functional Loss - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184366203 chr4:184366205 synonymous SNV . 0 23 hm5C_associated_SNPs_89817 0 0 3 PRPF8 POSTAR2 ENCODE chr4:184366177-184366318
64251 chr8 106814687 106814687 1 + G T ACC 106814685 + 106814665 106814705 41 CCCAAGATGTGATATCTTTCCAGGAATTGTCTCTAAACACT CCCAAGATGTGATATCTTTCCATGAATTGTCTCTAAACACT < 41bp 0.710017426724193 0.375803329756263 0.1100308 0.008795112 prediction 0.420034853448386 Functional Loss - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106814685 chr8:106814687 stopgain 1.000 1 23 hm5C_associated_SNPs_89818 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:106814677-106814688
64251 chr1 205494318 205494318 1 + G A SKCM 205494315 + 205494295 205494335 41 CATACGTGAAACTGGACAAACTGGGAGAGGTAAGACGCTGG CATACGTGAAACTGGACAAACTGAGAGAGGTAAGACGCTGG < 41bp 0.710009767824514 0.478127939584198 0.56210357 0.58018816 prediction 0.420019535649028 Functional Loss - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205494315 chr1:205494318 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_89829 0 0 1 PPIG POSTAR2 ENCODE chr1:205494269-205494323
64251 chrX 54841177 54841177 1 + G T STAD 54841175 + 54841155 54841195 41 CTGCGCTCTTACTATGAGACCAGCAAGATGAAAGTCCTCAA CTGCGCTCTTACTATGAGACCATCAAGATGAAAGTCCTCAA < 41bp 0.710005647939729 0.361910094997673 0.16943336 0.076517195 prediction 0.420011295879459 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841175 chrX:54841177 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_89831 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378376 chrX:54841160-54841180
64251 chr17 7761931 7761931 1 + A C UCEC 7761927 + 7761907 7761947 41 CAAACCCTCCTTTAAAGATCCGCAAGCACATAGATCCGCTG CAAACCCTCCTTTAAAGATCCGCACGCACATAGATCCGCTG < 41bp 0.710001749212933 0.286523514537388 0.07273087 0.031327277 prediction 0.420003498425866 Functional Loss - CYB5D1 ENSG00000182224 CDS Human protein_coding chr17:7761927 chr17:7761931 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_89833 0 0 1 BUD13 POSTAR2 ENCODE chr17:7761862-7761948
64251 chr16 839084 839084 1 + A C rs2277901 839083 + 839063 839103 41 AGGGCGGCGCCAGGAAGAGGCAGGTGGACGCCGACCTGCAG AGGGCGGCGCCAGGAAGAGGCCGGTGGACGCCGACCTGCAG < 41bp 0.815348029328258 0.605353050494747 0.8941488 0.8803262 prediction 0.419989957667021 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:839083 chr16:839084 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_89838 0 0 3 BUD13 POSTAR2 ENCODE chr16:839049-839129
64251 chr15 41769459 41769459 1 + C T KICH 41769456 + 41769436 41769476 41 GGGCAGAGGCCCTGGACCGCCAGCGGACCAAGAACATATCC GGGCAGAGGCCCTGGACCGCCAGTGGACCAAGAACATATCC < 41bp 0.729966823990998 0.519978973441572 0.83681434 0.4120375 prediction 0.419975701098853 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41769456 chr15:41769459 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_89844 0 0 3 FXR2 POSTAR2 ENCODE chr15:41769408-41769468
64251 chr19 57705281 57705281 1 + C T rs7258170 57705278 + 57705258 57705298 41 GATGATGTGGCTGTGACTTTCACCAAGGAGGAGTGGGGGCA GATGATGTGGCTGTGACTTTCACTAAGGAGGAGTGGGGGCA < 41bp 0.77638534612591 0.566401273070599 0.31302738 0.0816704 prediction 0.419968146110621 Functional Loss - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57705278 chr19:57705281 synonymous SNV . 0 24 hm5C_associated_SNPs_89847 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:57705258-57705309
64251 chr1 1417993 1417993 1 + C T LUAD 1417991 + 1417971 1418011 41 GACCGGGACAAAGTGACAGCCACGGTAAACATATTCATAAA GACCGGGACAAAGTGACAGCCATGGTAAACATATTCATAAA < 41bp 0.709968452919879 0.435056733417494 0.61428326 0.2022737 prediction 0.419936905839759 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417991 chr1:1417993 nonsynonymous SNV 0.897 5 23 hm5C_associated_SNPs_89856 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:1417986-1418007
64251 chr1 1417994 1417994 1 + G T LUAD 1417991 + 1417971 1418011 41 GACCGGGACAAAGTGACAGCCACGGTAAACATATTCATAAA GACCGGGACAAAGTGACAGCCACTGTAAACATATTCATAAA < 41bp 0.709968452919879 0.314251916629297 0.61428326 0.1534198 prediction 0.419936905839759 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417991 chr1:1417994 synonymous SNV . 0 24 hm5C_associated_SNPs_89857 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:1417986-1418007
64251 chr16 89985967 89985967 1 + C T UCEC 89985964 + 89985944 89985984 41 TGGAGACGGCCGTCATCCTCCTGCTGGAGGCCGGTGCACTG TGGAGACGGCCGTCATCCTCCTGTTGGAGGCCGGTGCACTG < 41bp 0.709967075841527 0.498476642997466 0.23755082 0.21196553 prediction 0.419934151683054 Functional Loss - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89985964 chr16:89985967 synonymous SNV . 0 24 hm5C_associated_SNPs_89859 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:89985948-89985984
64251 chr19 1432655 1432655 1 + G A READ 1432652 + 1432632 1432672 41 GCCCCGGACATGAGCAAGCCCCCGACAGCTCAGCCAGACTT GCCCCGGACATGAGCAAGCCCCCAACAGCTCAGCCAGACTT < 41bp 0.709962948476729 0.466937535828452 0.058419406 0.04303518 prediction 0.419925896953458 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1432652 chr19:1432655 synonymous SNV . 0 24 hm5C_associated_SNPs_89860 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:1432597-1432657
64251 chr17 57043252 57043252 1 + G A LUSC 57043249 + 57043229 57043269 41 ACTTTAATATGCTCTTCAACCTAGAGGTAAAGGGCACTTTC ACTTTAATATGCTCTTCAACCTAAAGGTAAAGGGCACTTTC < 41bp 0.725061481121405 0.515100303138175 0.24535605 0.08593333 prediction 0.41992235596646 Functional Loss - PPM1E ENSG00000175175 CDS Human protein_coding chr17:57043249 chr17:57043252 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_89862 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:57043232-57043266
64251 chr1 174969101 174969101 1 + G A rs548602563 174969098 + 174969078 174969118 41 GGCTTGGCGGGCTGTGCGTGCTCGCGGTGGGCGGTGGCGGC GGCTTGGCGGGCTGTGCGTGCTCACGGTGGGCGGTGGCGGC < 41bp 0.7281914647914 0.518230938105056 0.30721164 0.31964454 prediction 0.419921053372686 Functional Loss - CACYBP ENSG00000116161 UTR5 Human protein_coding chr1:174969098 chr1:174969101 . . 0 24 hm5C_associated_SNPs_89863 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr1:174969093-174969123
64251 chr17 21208440 21208440 1 + G A DLBC 21208437 + 21208417 21208457 41 GTCTGGAGCCTGGGCATCACCATGGTACTGTGGGGGGCCAG GTCTGGAGCCTGGGCATCACCATAGTACTGTGGGGGGCCAG < 41bp 0.819661966883903 0.60970396625574 0.33086747 0.29237992 prediction 0.419916001256325 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21208437 chr17:21208440 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_89866 0 0 3 EFTUD2 POSTAR2 ENCODE chr17:21208420-21208456
64251 chr5 158710291 158710291 1 + C T BLCA 158710289 + 158710269 158710309 41 TTTTAAAATTAACTCAGTACCTCAAGGAGATAGCAAAATTA TTTTAAAATTAACTCAGTACCTTAAGGAGATAGCAAAATTA < 41bp 0.7099567260292 0.41745426460552 0.16276413 0.032153964 prediction 0.4199134520584 Functional Loss - UBLCP1 ENSG00000164332 CDS Human protein_coding chr5:158710289 chr5:158710291 synonymous SNV . 0 23 hm5C_associated_SNPs_89869 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:158710265-158710294
64251 chr1 110883001 110883001 1 + G C BLCA 110883000 + 110882980 110883020 41 CACCTCCGCCACCATTGCCTCGAGACCTGGAGAGAGAAAGA CACCTCCGCCACCATTGCCTCCAGACCTGGAGAGAGAAAGA < 41bp 0.709954823638797 0.384734806625833 0.8369527 0.38905245 prediction 0.419909647277594 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883000 chr1:110883001 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_89870 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:110882923-110883012
64251 chr12 69042557 69042557 1 + C T UCEC 69042554 + 69042534 69042574 41 CTCAGGAGGCGTTGGAAAGTCTGCTTTGGTAAGTCATTCTT CTCAGGAGGCGTTGGAAAGTCTGTTTTGGTAAGTCATTCTT < 41bp 0.715886388259942 0.505933134947825 0.16121623 0.2075865 prediction 0.419906506624234 Functional Loss - RAP1B ENSG00000127314 CDS Human protein_coding chr12:69042554 chr12:69042557 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_89871 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:69042515-69042558
64251 chr13 24861035 24861035 1 + G A LIHC 24861032 + 24861012 24861052 41 AGATGCGGACCAACGTCATCCGGGAGATCATGGACACCGAG AGATGCGGACCAACGTCATCCGGAAGATCATGGACACCGAG < 41bp 0.740604671882656 0.5306516671101 0.64949596 0.25872433 prediction 0.419906009545112 Functional Loss - SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24861032 chr13:24861035 nonsynonymous SNV 0.974 4 24 hm5C_associated_SNPs_89873 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr13:24861026-24861036
64251 chr4 1808044 1808044 1 + C T BLCA 1808041 + 1808021 1808061 41 TGTTTGACCGAGTCTACACTCACCAGAGTGACGTGTACGTG TGTTTGACCGAGTCTACACTCACTAGAGTGACGTGTACGTG < 41bp 0.758356045329297 0.548406622905566 0.6574191 0.36348718 prediction 0.419898844847462 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808041 chr4:1808044 stopgain 1.000 0 24 hm5C_associated_SNPs_89877 0 0 5 DDX24 POSTAR2 ENCODE chr4:1807999-1808052
64251 chr3 112710045 112710045 1 + C T HNSC 112710042 + 112710022 112710062 41 CCCCCTACGGGAGGCAAGACCTTCACCTGCGTATCTTTGAC CCCCCTACGGGAGGCAAGACCTTTACCTGCGTATCTTTGAC < 41bp 0.746746980134216 0.536799872904446 0.37659675 0.26128483 prediction 0.41989421445954 Functional Loss - GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112710042 chr3:112710045 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_89880 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:112710039-112710067
64251 chr13 24860418 24860418 1 + G A COAD 24860415 + 24860395 24860435 41 ACCATGTGACCATGGATGACCAGGAACTGGGCTTCAAAGCC ACCATGTGACCATGGATGACCAGAAACTGGGCTTCAAAGCC < 41bp 0.771237001338757 0.561290007450139 0.88784164 0.7380483 prediction 0.419893987777236 Functional Loss - SPATA13 ENSG00000182957;ENSG00000273167 CDS Human other chr13:24860415 chr13:24860418 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_89881 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr13:24860418-24860429
64251 chr4 124323326 124323326 1 + G T HNSC 124323324 + 124323304 124323344 41 GTGCAAGTGTGGAGAATGCACTGCTCCCAGGACCCTACCAT GTGCAAGTGTGGAGAATGCACTTCTCCCAGGACCCTACCAT < 41bp 0.709931512937414 0.374120490826171 0.17829475 0.11262283 prediction 0.419863025874827 Functional Loss - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323324 chr4:124323326 nonsynonymous SNV 0.958 1 23 hm5C_associated_SNPs_89895 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:124323301-124323326
64251 chr13 103518166 103518166 1 + A T LUSC 103518162 + 103518142 103518182 41 CCTGCTGAGTCCGAGAGCCTCCTGAGGGACAACTCTGAGAG CCTGCTGAGTCCGAGAGCCTCCTGTGGGACAACTCTGAGAG < 41bp 0.709924434054759 0.378691608990316 0.20966461 0.14791298 prediction 0.419848868109519 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103518162 chr13:103518166 nonsynonymous SNV 0.000 2 25 hm5C_associated_SNPs_89898 0 0 2 GRWD1 POSTAR2 ENCODE chr13:103518062-103518236
64251 chr15 85326612 85326612 1 + C T LGG 85326610 + 85326590 85326630 41 TCACAAGGATCCGGATGCCACTCGATTCTTCGGGGAAGCTT TCACAAGGATCCGGATGCCACTTGATTCTTCGGGGAAGCTT < 41bp 0.866970183408782 0.657047330121307 0.61438584 0.073240936 prediction 0.419845706574948 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326610 chr15:85326612 stopgain 0.156 0 23 hm5C_associated_SNPs_89899 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr15:85326585-85326613
64251 chr17 55123547 55123547 1 + C T CESC 55123545 + 55123525 55123565 41 GTCACCGAGGAGCACGTAGGCTCCGGGCTCGAGTGCCCCGT GTCACCGAGGAGCACGTAGGCTTCGGGCTCGAGTGCCCCGT < 41bp 0.804312829954989 0.59439307818439 0.14451796 0.093346804 prediction 0.419839503541197 Functional Loss - RNF126P1 ENSG00000261192 ncRNA_exonic Human transcribed_processed_pseudogene chr17:55123545 chr17:55123547 . . 0 23 hm5C_associated_SNPs_89901 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:55123525-55123555
64251 chr10 121652433 121652433 1 + C T LUSC 121652431 + 121652411 121652451 41 AGTCACCCAGGCCTCCGCTTCTCCGGCCTCCCTGCTCTTAC AGTCACCCAGGCCTCCGCTTCTTCGGCCTCCCTGCTCTTAC < 41bp 0.709918570589681 0.44388439047026 0.402458 0.33519742 prediction 0.419837141179363 Functional Loss - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121652431 chr10:121652433 nonsynonymous SNV 0.088 1 23 hm5C_associated_SNPs_89903 0 0 2 IGF2BP2 POSTAR2 ENCODE chr10:121652399-121652458
64251 chr9 80932646 80932646 1 + G A rs184256039 80932643 + 80932623 80932663 41 ATTAAAAACAATGGAGGTGCCGCGGCCATGGAGAAGCTTAG ATTAAAAACAATGGAGGTGCCGCAGCCATGGAGAAGCTTAG < 41bp 0.773597054757796 0.563684936406745 0.15628836 0.059457332 prediction 0.419824236702103 Functional Loss - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80932643 chr9:80932646 synonymous SNV . 0 24 hm5C_associated_SNPs_89905 0 0 1 GRWD1 POSTAR2 ENCODE chr9:80932595-80932658
64251 chr17 37070638 37070638 1 + G C LUAD 37070634 + 37070614 37070654 41 GGCCCTAGCGGGGGCGAGGGCATGGAGCCAGAGCGTCGGGA GGCCCTAGCGGGGGCGAGGGCATGCAGCCAGAGCGTCGGGA < 41bp 0.70991170854387 0.409271480824091 0.6555746 0.48037013 prediction 0.41982341708774 Functional Loss - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070634 chr17:37070638 nonsynonymous SNV 0.726 0 25 hm5C_associated_SNPs_89906 0 0 6 GRWD1 POSTAR2 ENCODE chr17:37070577-37070658
64251 chr7 90042447 90042447 1 + T C LUSC 90042446 + 90042426 90042466 41 GTGAGCCTCTCCCCATCTATCTGGGTCATCTTTTATAACAT GTGAGCCTCTCCCCATCTATCCGGGTCATCTTTTATAACAT < 41bp 0.803582536494042 0.593671677156977 0.90767854 0.9338249 prediction 0.41982171867413 Functional Loss - CLDN12 ENSG00000157224 CDS Human protein_coding chr7:90042446 chr7:90042447 nonsynonymous SNV 0.960 4 22 hm5C_associated_SNPs_89907 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:90042417-90042447
64251 chr11 124564278 124564278 1 + G A LGG 124564275 + 124564255 124564295 41 TGCCTTCCGGGGACACATAGCCAGAGAGGAGGCAAAGAAAA TGCCTTCCGGGGACACATAGCCAAAGAGGAGGCAAAGAAAA < 41bp 0.763678630282009 0.553770270322263 0.6376505 0.34525943 prediction 0.419816719919494 Functional Loss - SPA17 ENSG00000064199 CDS Human protein_coding chr11:124564275 chr11:124564278 nonsynonymous SNV 0.668 4 24 hm5C_associated_SNPs_89910 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:124564250-124564291
64251 chr12 96661014 96661014 1 + G A rs2302901 96661011 + 96660991 96661031 41 TGATGAAACAAATTTGTCCCCACGGGCTAGTTTACCTGTGT TGATGAAACAAATTTGTCCCCACAGGCTAGTTTACCTGTGT < 41bp 0.71176402429538 0.501855669499435 0.4917457 0.32783166 prediction 0.41981670959189 Functional Loss - ELK3 ENSG00000111145 UTR3 Human protein_coding chr12:96661011 chr12:96661014 . . 0 24 hm5C_associated_SNPs_89911 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:96660995-96661020
64251 chr19 2246901 2246901 1 + C T STAD 2246898 + 2246878 2246918 41 CAGATTGACTACCCTGAGATCGCCGAGGGCATCATGCCACG CAGATTGACTACCCTGAGATCGCTGAGGGCATCATGCCACG < 41bp 0.717810778382757 0.507906022105708 0.72650164 0.26680085 prediction 0.419809512554098 Functional Loss - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2246898 chr19:2246901 synonymous SNV . 0 24 hm5C_associated_SNPs_89914 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:2246878-2246909
64251 chr4 159092400 159092400 1 - G A COAD 159092403 - 159092383 159092423 41 GAGAAACCTTCTGCTGGGCACTGCGTGTGCCATCTACTTGG GAGAAACCTTCTGCTGGGCACTGTGTGTGCCATCTACTTGG < 41bp 0.752271840434909 0.542370985680086 0.08812192 0.053430825 prediction 0.419801709509645 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092403 chr4:159092400 nonsynonymous SNV 0.981 2 24 hm5C_associated_SNPs_89919 0 0 3 DDX3X POSTAR2 ENCODE chr4:159092317-159092412
64251 chr10 5951161 5951161 1 + C T rs61729842 5951159 + 5951139 5951179 41 AGTGCTCTCCGAGTGTGGATCCCGAGAGGGTGCTGTGGAGT AGTGCTCTCCGAGTGTGGATCCTGAGAGGGTGCTGTGGAGT < 41bp 0.709899861826294 0.425832904310128 0.5413599 0.46793586 prediction 0.419799723652587 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951159 chr10:5951161 synonymous SNV . 0 23 hm5C_associated_SNPs_89921 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:5951149-5951171
64251 chr10 5951162 5951162 1 + G A GBM 5951159 + 5951139 5951179 41 AGTGCTCTCCGAGTGTGGATCCCGAGAGGGTGCTGTGGAGT AGTGCTCTCCGAGTGTGGATCCCAAGAGGGTGCTGTGGAGT < 41bp 0.709899861826294 0.446824211804483 0.5413599 0.43781754 prediction 0.419799723652587 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951159 chr10:5951162 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_89922 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:5951149-5951171
64251 chr17 74382317 74382317 1 + C T UCEC 74382315 + 74382295 74382335 41 CCTGCAGAGCGGCGGAACCACGCGCGGGAGCTGGTGCGGTC CCTGCAGAGCGGCGGAACCACGTGCGGGAGCTGGTGCGGTC < 41bp 0.807193038221227 0.597293837420096 0.49792746 0.75553495 prediction 0.419798401602262 Functional Loss - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382315 chr17:74382317 nonsynonymous SNV 0.764 4 23 hm5C_associated_SNPs_89924 0 0 4 PPIG POSTAR2 ENCODE chr17:74382302-74382336
64251 chr1 28595721 28595721 1 + G A LIHC 28595718 + 28595698 28595738 41 AGAGGGAGAGCCGGGCTCGGCGAGGCCCTCGAGGGCCCAGC AGAGGGAGAGCCGGGCTCGGCGAAGCCCTCGAGGGCCCAGC < 41bp 0.830858931461916 0.620962638690154 0.8909574 0.370207 prediction 0.419792585543524 Functional Loss - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28595718 chr1:28595721 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_89929 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:28595719-28595756
64251 chrX 129148824 129148824 1 + G A GBM 129148821 + 129148801 129148841 41 TCGCCCTTTGTCATCTTTCCCGAGATCGTGAGGAATGGGGA TCGCCCTTTGTCATCTTTCCCGAAATCGTGAGGAATGGGGA < 41bp 0.709896151532861 0.457923925370885 0.3589564 0.17436063 prediction 0.419792303065723 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148821 chrX:129148824 synonymous SNV . 0 24 hm5C_associated_SNPs_89930 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129148820-129148840
64251 chrX 151869622 151869622 1 + G T GBM 151869618 + 151869598 151869638 41 CACCTTCCCTGACCTGGAGTCTGAGTTCCAAGCAGCACTCA CACCTTCCCTGACCTGGAGTCTGATTTCCAAGCAGCACTCA < 41bp 0.70989052903908 0.491055485512552 0.2715979 0.11259931 prediction 0.419781058078161 Functional Loss - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869618 chrX:151869622 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_89934 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:151869620-151869652
64251 chr9 129642229 129642229 1 + T C OV 129642228 + 129642208 129642248 41 AGCCCACCGCAAGCAGTGACCTCCGGATGGAGACGACCCCC AGCCCACCGCAAGCAGTGACCCCCGGATGGAGACGACCCCC < 41bp 0.830411303092524 0.620524242959864 0.78048533 0.15725863 prediction 0.419774120265318 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642228 chr9:129642229 nonsynonymous SNV 0.860 0 22 hm5C_associated_SNPs_89936 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:129642228-129642229
64251 chr1 233515161 233515161 1 + C T SKCM 233515158 + 233515138 233515178 41 TCAAGTGCCCTGGGCATCCTCTCCACACCTTCTTTCTCCAC TCAAGTGCCCTGGGCATCCTCTCTACACCTTCTTTCTCCAC < 41bp 0.77882969753498 0.568950527302181 0.9631468 0.9308995 prediction 0.419758340465598 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233515158 chr1:233515161 synonymous SNV . 0 24 hm5C_associated_SNPs_89940 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:233515129-233515165
64251 chr15 78825912 78825912 1 + G A SKCM 78825909 + 78825889 78825929 41 TCTCATGGTTACTGCAAAAACCGGGTGGAAACACTTACAGC TCTCATGGTTACTGCAAAAACCGAGTGGAAACACTTACAGC < 41bp 0.789867609330238 0.579988691006962 0.5144735 0.30933568 prediction 0.419757836646552 Functional Loss - HYKK ENSG00000188266 CDS Human protein_coding chr15:78825909 chr15:78825912 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_89941 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:78825891-78825923
64251 chr11 65632076 65632076 1 + A C rs115472389 65632075 + 65632055 65632095 41 ACACTGCTGCAGGCTGTCACCAACACTCAGGTGAGCTGGGA ACACTGCTGCAGGCTGTCACCCACACTCAGGTGAGCTGGGA < 41bp 0.833261658346691 0.623383129903438 0.18265319 0.04096818 prediction 0.419757056886506 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632075 chr11:65632076 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_89943 0 0 7 BUD13 POSTAR2 ENCODE chr11:65632050-65632079
64251 chr1 231132923 231132923 1 + C T COAD 231132920 + 231132900 231132940 41 TGGCCGTGTTGAGTGGCTTACTGCTGGAAAGCATCATGGTC TGGCCGTGTTGAGTGGCTTACTGTTGGAAAGCATCATGGTC < 41bp 0.729274644120925 0.519404059058473 0.13571003 0.054027498 prediction 0.419741170124905 Functional Loss - ARV1 ENSG00000173409 CDS Human protein_coding chr1:231132920 chr1:231132923 synonymous SNV . 0 24 hm5C_associated_SNPs_89948 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:231132910-231132932
64251 chr19 16988446 16988446 1 + C T UCEC 16988443 + 16988423 16988463 41 TCCTCCTGAAACCTGTGTTCCTGCAGAGGTAAGAGGCCCTG TCCTCCTGAAACCTGTGTTCCTGTAGAGGTAAGAGGCCCTG < 41bp 0.70986912366649 0.486703104014739 0.177778 0.20462516 prediction 0.41973824733298 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16988443 chr19:16988446 stopgain 1.000 1 24 hm5C_associated_SNPs_89949 0 0 1 PPIG POSTAR2 ENCODE chr19:16988378-16988447
64251 chr19 46376224 46376224 1 + G T LUAD 46376221 + 46376201 46376241 41 AGACACCAGCACCTCCCAAACTGGACGTGGGGTTTGGGGGC AGACACCAGCACCTCCCAAACTGTACGTGGGGTTTGGGGGC < 41bp 0.936884696165443 0.727015970753438 0.30283833 0.1289821 prediction 0.419737450824009 Functional Loss - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46376221 chr19:46376224 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_89950 0 0 1 RBM15 POSTAR2 ENCODE chr19:46376218-46376285
64251 chr1 26509852 26509852 1 + C T COAD 26509850 + 26509830 26509870 41 ACGTCAGGTTCCCACTGACTCCCGACTGCAGATCCAGCCTG ACGTCAGGTTCCCACTGACTCCTGACTGCAGATCCAGCCTG < 41bp 0.845164342122147 0.635297051577703 0.08276898 0.079405785 prediction 0.419734581088889 Functional Loss - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26509850 chr1:26509852 stopgain 0.003 0 23 hm5C_associated_SNPs_89952 0 0 1 PPIG POSTAR2 ENCODE chr1:26509849-26509911
64251 chr12 6946232 6946232 1 + G A rs76248966 6946229 + 6946209 6946249 41 CATGAACGCTTCGAGGGGCTCACGGTGCTTAAGGCTGCGCA CATGAACGCTTCGAGGGGCTCACAGTGCTTAAGGCTGCGCA < 41bp 0.811901712853525 0.602036668405442 0.78103715 0.115296334 prediction 0.419730088896165 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6946229 chr12:6946232 synonymous SNV . 0 24 hm5C_associated_SNPs_89956 0 0 1 BUD13 POSTAR2 ENCODE chr12:6946218-6946274
64251 chr3 133475757 133475757 1 + G A SKCM 133475754 + 133475734 133475774 41 CGGAAGCCGGTAGATGAATACAAGGACTGCCACTTGGCCCA CGGAAGCCGGTAGATGAATACAAAGACTGCCACTTGGCCCA < 41bp 0.815106931809921 0.60524336042038 0.7484295 0.12476808 prediction 0.41972714277908 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133475754 chr3:133475757 synonymous SNV . 0 24 hm5C_associated_SNPs_89958 0 0 7 DHX30 POSTAR2 ENCODE chr3:133475757-133475799
64251 chr21 44324309 44324309 1 + C T LUSC 44324306 + 44324286 44324326 41 CCACGGTTTCCATGAAAAGACAGCAGCGCTGAAGCTTGAGG CCACGGTTTCCATGAAAAGACAGTAGCGCTGAAGCTTGAGG < 41bp 0.712163709321254 0.502306519618966 0.20336044 0.25944558 prediction 0.419714379404577 Functional Loss - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44324306 chr21:44324309 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_89963 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:44324296-44324328
64251 chr10 72520329 72520329 1 + C T COAD 72520326 + 72520306 72520346 41 ACCCCAGGACCCTGCAGATGCTGCAGAGCCTCCTGGAAAGC ACCCCAGGACCCTGCAGATGCTGTAGAGCCTCCTGGAAAGC < 41bp 0.730342272201514 0.520486160929172 0.62755877 0.2696212 prediction 0.419712222544684 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72520326 chr10:72520329 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_89964 0 0 1 RBM15 POSTAR2 ENCODE chr10:72520283-72520344
64251 chrX 100081744 100081744 1 + G A UCEC 100081741 + 100081721 100081761 41 TGGCCCTGGTTCCTTAGCTCCTGGAGGTAAGTTTCATTTAG TGGCCCTGGTTCCTTAGCTCCTGAAGGTAAGTTTCATTTAG < 41bp 0.810057752270553 0.60021904527022 0.43196106 0.1410496 prediction 0.419677414000665 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100081741 chrX:100081744 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_89980 0 0 2 PRPF8 POSTAR2 ENCODE chrX:100081707-100081772
64251 chr17 7211848 7211848 1 + G A rs187065604 7211845 + 7211825 7211865 41 CTTCCCAACCTCAAGGGCCCCAGGAGCTTTCCTGAAAAACC CTTCCCAACCTCAAGGGCCCCAGAAGCTTTCCTGAAAAACC < 41bp 0.752178201419524 0.542341871810627 0.38588953 0.35168985 prediction 0.419672659217793 Functional Loss - EIF5A ENSG00000132507 UTR5 Human protein_coding chr17:7211845 chr17:7211848 . . 0 24 hm5C_associated_SNPs_89984 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:7211820-7211851
64251 chr8 125464058 125464058 1 + T C UCEC 125464057 + 125464037 125464077 41 ACTTTGGAGATAACAGAAAACTGAAGCTCTCAAATATTGCA ACTTTGGAGATAACAGAAAACCGAAGCTCTCAAATATTGCA < 41bp 0.709835707652344 0.47454318730969 0.120868355 0.038250268 prediction 0.419671415304689 Functional Loss - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464057 chr8:125464058 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_89986 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:125464040-125464060
64251 chr12 34180870 34180870 1 + G A rs10400478 34180867 + 34180847 34180887 41 AGTCTCTGCCTCTGTGTTCACACGGCCTTTCCCTCTGTCTT AGTCTCTGCCTCTGTGTTCACACAGCCTTTCCCTCTGTCTT < 41bp 0.730483226214898 0.520650064516656 0.55911624 0.17484766 prediction 0.419666323396485 Functional Loss - ALG10 ENSG00000245482 ncRNA_intronic Human antisense chr12:34180867 chr12:34180870 . . 0 24 hm5C_associated_SNPs_89989 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:34180846-34180878
64251 chr2 209212732 209212732 1 + G A LUAD 209212729 + 209212709 209212749 41 GCAAGGAGGGGACCGAGAATCAAGGCGTTGAGCCTCAAGGT GCAAGGAGGGGACCGAGAATCAAAGCGTTGAGCCTCAAGGT < 41bp 0.709818124428207 0.477749299203312 0.90551126 0.8537456 prediction 0.419636248856414 Functional Loss - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209212729 chr2:209212732 nonsynonymous SNV 0.948 1 24 hm5C_associated_SNPs_90000 0 0 1 DDX24 POSTAR2 ENCODE chr2:209212687-209212744
64251 chr9 37424938 37424938 1 + C T UCEC 37424935 + 37424915 37424955 41 CACGGCCTGCTCTGCCTCCTCTCCGACCACGTGGACAAGAG CACGGCCTGCTCTGCCTCCTCTCTGACCACGTGGACAAGAG < 41bp 0.748295563686405 0.538483664727806 0.8808266 0.21859178 prediction 0.419623797917199 Functional Loss - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37424935 chr9:37424938 synonymous SNV . 0 24 hm5C_associated_SNPs_90005 0 0 7 DDX3X POSTAR2 ENCODE chr9:37424902-37424968
64251 chr8 57125442 57125442 1 + G A CESC 57125439 + 57125419 57125459 41 GAAGAAACTCATGCACCAAACTCGAACTGGGTATATGTGAT GAAGAAACTCATGCACCAAACTCAAACTGGGTATATGTGAT < 41bp 0.728169166932043 0.518360712800736 0.70371735 0.115323484 prediction 0.419616908262615 Functional Loss - CHCHD7 ENSG00000170791 CDS Human protein_coding chr8:57125439 chr8:57125442 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_90008 0 0 1 GRWD1 POSTAR2 ENCODE chr8:57125368-57125471
64251 chr11 34988314 34988314 1 + C T COAD 34988311 + 34988291 34988331 41 CCACAGCTGGACCATCTTATCCCCGGCCTGTGATCCCACCA CCACAGCTGGACCATCTTATCCCTGGCCTGTGATCCCACCA < 41bp 0.745519586775436 0.535711451766145 0.20171285 0.09693563 prediction 0.419616270018581 Functional Loss - PDHX ENSG00000110435 CDS Human protein_coding chr11:34988311 chr11:34988314 nonsynonymous SNV 0.020 4 24 hm5C_associated_SNPs_90010 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34988300-34988320
64251 chr1 233511764 233511764 1 + G T UCEC 233511762 + 233511742 233511782 41 TTTAAGAAAAAAGGTTGTACCTGGGGACCAAATTCCATTCA TTTAAGAAAAAAGGTTGTACCTTGGGACCAAATTCCATTCA < 41bp 0.709805523709876 0.375266356473761 0.52510715 0.015544713 prediction 0.419611047419751 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233511762 chr1:233511764 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_90013 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:233511738-233511782
64251 chr12 110019277 110019277 1 + C T COAD 110019275 + 110019255 110019295 41 TTGGGCTCCAGCGCCGCCTACTCGGTGTGTCTGGCAGCAGC TTGGGCTCCAGCGCCGCCTACTTGGTGTGTCTGGCAGCAGC < 41bp 0.858474798622786 0.648670992049318 0.4001489 0.4679686 prediction 0.419607613146936 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110019275 chr12:110019277 nonsynonymous SNV 0.964 3 23 hm5C_associated_SNPs_90014 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr12:110019275-110019322
64251 chr7 73973284 73973284 1 + G T STAD 73973281 + 73973261 73973301 41 GATCATCGAGGGGCTGCCCCCAGGAATCCCGTTCCGAAAGC GATCATCGAGGGGCTGCCCCCAGTAATCCCGTTCCGAAAGC < 41bp 0.936164005495594 0.726361616641243 0.9109982 0.2022889 prediction 0.419604777708702 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73973281 chr7:73973284 nonsynonymous SNV 0.807 4 24 hm5C_associated_SNPs_90017 0 0 1 YBX3 POSTAR2 ENCODE chr7:73973244-73973310
64251 chr3 169756775 169756775 1 + A C rs536805495 169756774 + 169756754 169756794 41 ACGGACCGGGCCTCCGGAGGCAGGTTCGGCTGGAAGGAACC ACGGACCGGGCCTCCGGAGGCCGGTTCGGCTGGAAGGAACC < 41bp 0.753396059445792 0.543595791960589 0.9036678 0.51005363 prediction 0.419600534970405 Functional Loss - GPR160 ENSG00000173890 UTR5 Human protein_coding chr3:169756774 chr3:169756775 . . 0 22 hm5C_associated_SNPs_90021 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:169756749-169756786
64251 chr5 150838389 150838389 1 + C T rs142413607 150838387 + 150838367 150838407 41 GACTTCGGAATGAAGACTACCACGACTACAGCTCCACGGAC GACTTCGGAATGAAGACTACCATGACTACAGCTCCACGGAC < 41bp 0.858946134462629 0.649149498883338 0.0689494 0.08985776 prediction 0.419593271158581 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838387 chr5:150838389 synonymous SNV . 0 23 hm5C_associated_SNPs_90023 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:150838367-150838397
64251 chr11 75279804 75279804 1 + G T THYM 75279801 + 75279781 75279821 41 TGGGATGAGAAATTCCACCACAAGATGGTGGACAACCGTGG TGGGATGAGAAATTCCACCACAATATGGTGGACAACCGTGG < 41bp 0.709786289872266 0.303827898374659 0.21143636 0.145452 prediction 0.419572579744533 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75279801 chr11:75279804 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_90033 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:75279788-75279814
64251 chr20 44571753 44571753 1 + G T LUSC 44571750 + 44571730 44571770 41 CTGCAGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGG CTGCAGGCATTGAGCCTCCACGGTAGTCTTTCAACCGCTGG < 41bp 0.939614319948744 0.729829502880021 0.39112324 0.1151706 prediction 0.419569634137445 Functional Loss - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571750 chr20:44571753 stopgain 0.920 1 24 hm5C_associated_SNPs_90035 0 0 1 PPIG POSTAR2 ENCODE chr20:44571752-44571784
64251 chr8 48878772 48878772 1 + C T rs17334388 48878769 + 48878749 48878789 41 ATTGACCAGCTCATCACCATCAGCGGCATGGTGATCAGGAC ATTGACCAGCTCATCACCATCAGTGGCATGGTGATCAGGAC < 41bp 0.75765610479726 0.54787368371676 0.7789186 0.4558377 prediction 0.419564842161 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878769 chr8:48878772 synonymous SNV . 0 24 hm5C_associated_SNPs_90038 1 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48878772-48878827
64251 chr19 810762 810762 1 + T C LIHC 810761 + 810741 810781 41 CGGTCCAGGCCCTCATTGACCTGCACAACCACGACCTCGGG CGGTCCAGGCCCTCATTGACCCGCACAACCACGACCTCGGG < 41bp 0.829504735870103 0.619726950121998 0.1884318 0.27098542 prediction 0.41955557149621 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:810761 chr19:810762 nonsynonymous SNV 0.951 3 22 hm5C_associated_SNPs_90044 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:810737-810764
64251 chr20 25190505 25190505 1 + G A rs144718324 25190502 + 25190482 25190522 41 TAGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTG TAGAAACTCCCACGTTAACCCACAAAACCTTCAAAGCACTG < 41bp 0.750973833824178 0.541197460838815 0.20066106 0.14197224 prediction 0.419552745970726 Functional Loss - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25190502 chr20:25190505 nonsynonymous SNV 0.938 4 24 hm5C_associated_SNPs_90046 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr20:25190495-25190517
64251 chr16 75138757 75138757 1 + G T UCEC 75138755 + 75138735 75138775 41 CTGCAGGGGGACACGATAGCCAGGCTGCCCTGCCTGTGCAT CTGCAGGGGGACACGATAGCCATGCTGCCCTGCCTGTGCAT < 41bp 0.709772852006532 0.348048813649179 0.9015838 0.22704118 prediction 0.419545704013065 Functional Loss - ZNRF1 ENSG00000186187 CDS Human protein_coding chr16:75138755 chr16:75138757 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_90050 0 0 2 DDX24 POSTAR2 ENCODE chr16:75138743-75138828
64251 chr8 142441281 142441281 1 + G A rs566439054 142441278 + 142441258 142441298 41 CCCCACATCGCCTTTTCCTCCCCGACACCTCCGTGCACTTG CCCCACATCGCCTTTTCCTCCCCAACACCTCCGTGCACTTG < 41bp 0.782798301570323 0.57302918202822 0.07931852 0.11981517 prediction 0.419538239084205 Functional Loss - PTP4A3 ENSG00000184489 UTR3 Human protein_coding chr8:142441278 chr8:142441281 . . 0 24 hm5C_associated_SNPs_90054 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:142441232-142441281
64251 chr17 66519036 66519036 1 + C T COAD 66519034 + 66519014 66519054 41 GCTATCAGCGCTGAGGTCTACACGGAGGAAGATGCGGCATC GCTATCAGCGCTGAGGTCTACATGGAGGAAGATGCGGCATC < 41bp 0.858826329928954 0.649058547314557 0.7826126 0.36119127 prediction 0.419535565228794 Functional Loss - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66519034 chr17:66519036 nonsynonymous SNV 0.852 3 23 hm5C_associated_SNPs_90055 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:66518991-66519059
64251 chr3 152880554 152880554 1 + G A LUAD 152880551 + 152880531 152880571 41 TCCGCGCTCACCGTGCAGTTCGTGACGGGCTCCTTCATCGA TCCGCGCTCACCGTGCAGTTCGTAACGGGCTCCTTCATCGA < 41bp 0.797702532400444 0.587938681585477 0.2921043 0.07819182 prediction 0.419527701629935 Functional Loss - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880551 chr3:152880554 synonymous SNV . 0 24 hm5C_associated_SNPs_90057 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:152880543-152880570
64251 chr18 72999575 72999575 1 + C T TGCT 72999572 + 72999552 72999592 41 GGGGATCATCATGGACCACTCACCGGAGCCTTCCTTCATCA GGGGATCATCATGGACCACTCACTGGAGCCTTCCTTCATCA < 41bp 0.709763576874983 0.493835282246367 0.063045144 0.010386884 prediction 0.419527153749965 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999572 chr18:72999575 nonsynonymous SNV 0.216 4 24 hm5C_associated_SNPs_90058 1 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr18:72999528-72999596
64251 chr11 36248772 36248772 1 + C T COAD 36248769 + 36248749 36248789 41 TGGCACTGGTCTTGCACCACCAGCGGAAGCGGAACAACCTC TGGCACTGGTCTTGCACCACCAGTGGAAGCGGAACAACCTC < 41bp 0.720289417429316 0.510526125225442 0.44681406 0.220994 prediction 0.419526584407747 Functional Loss - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36248769 chr11:36248772 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_90059 0 0 1 TROVE2 POSTAR2 ENCODE chr11:36248737-36248775
64251 chr5 98109771 98109771 1 + G C rs372401498 98109770 + 98109750 98109790 41 GCCCACGAGACCTGCATGGACGGGCATGGGCTTGAGAGCAG GCCCACGAGACCTGCATGGACCGGCATGGGCTTGAGAGCAG < 41bp 0.884446603549457 0.674683988841232 0.76752806 0.3106537 prediction 0.419525229416448 Functional Loss - RGMB ENSG00000174136 CDS Human protein_coding chr5:98109770 chr5:98109771 synonymous SNV . 0 22 hm5C_associated_SNPs_90061 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:98109756-98109792
64251 chr13 114290396 114290396 1 + C T rs202144389 114290393 + 114290373 114290413 41 ATCCACCTGCCCTTCATCATCGTCAACACCAGCAAGAAGAC ATCCACCTGCCCTTCATCATCGTTAACACCAGCAAGAAGAC < 41bp 0.709762167503972 0.486785671136243 0.15217614 0.16315725 prediction 0.419524335007945 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290393 chr13:114290396 synonymous SNV . 0 24 hm5C_associated_SNPs_90063 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:114290343-114290408
64251 chr1 32502584 32502584 1 + G A CESC 32502581 + 32502561 32502601 41 GAATGGAGTACCTGAACCCTCTCGTGGACGTGGGGTGCCAG GAATGGAGTACCTGAACCCTCTCATGGACGTGGGGTGCCAG < 41bp 0.806922886448013 0.597162122484964 0.22749889 0.094691545 prediction 0.419521527926097 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502581 chr1:32502584 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90064 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr1 227149223 227149223 1 + C T rs187123516 227149221 + 227149201 227149241 41 GCGGCCAGGGCCCTGCAGTCCACGGCTGTGGAGCAGATTGG GCGGCCAGGGCCCTGCAGTCCATGGCTGTGGAGCAGATTGG < 41bp 0.709753292716937 0.443627029805039 0.14207733 0.107189864 prediction 0.419506585433874 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227149221 chr1:227149223 nonsynonymous SNV 0.627 2 23 hm5C_associated_SNPs_90068 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr1:227149215-227149240
64251 chr4 88036340 88036340 1 + G T LUSC 88036337 + 88036317 88036357 41 TCTCGGATACCCCAGCCTCCCGGGAAGGGGAGCCGCCAGAG TCTCGGATACCCCAGCCTCCCGGTAAGGGGAGCCGCCAGAG < 41bp 0.929073175168056 0.719322714449127 0.8701663 0.322674 prediction 0.419500921437858 Functional Loss - AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036337 chr4:88036340 synonymous SNV . 0 24 hm5C_associated_SNPs_90071 0 0 3 FMR1 POSTAR2 ENCODE chr4:88036309-88036355
64251 chr21 45479008 45479008 1 + A T HNSC 45479004 + 45478984 45479024 41 GAGGAGCTTGCCTTTGTTTTCGAGATGCTGCAGCAGTTCGA GAGGAGCTTGCCTTTGTTTTCGAGTTGCTGCAGCAGTTCGA < 41bp 0.819789624120483 0.610040927304431 0.8916141 0.61510676 prediction 0.419497393632105 Functional Loss - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45479004 chr21:45479008 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_90074 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:45479001-45479035
64251 chr22 39907427 39907427 1 + C T CESC 39907425 + 39907405 39907445 41 GCGGCCATGCTGGGCATCGCCACGCTGGCAGTTAAGCGGGT GCGGCCATGCTGGGCATCGCCATGCTGGCAGTTAAGCGGGT < 41bp 0.709746082163148 0.43658535199404 0.8616209 0.87444913 prediction 0.419492164326296 Functional Loss - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39907425 chr22:39907427 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_90076 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39907403-39907435
64251 chr5 98109838 98109838 1 + A C rs2662263 98109837 + 98109817 98109857 41 GCCGAGGTTGAGCAGCGCCGCAGCCCCGGGCTCTGCCCCCC GCCGAGGTTGAGCAGCGCCGCCGCCCCGGGCTCTGCCCCCC < 41bp 0.709742062089933 0.456573395967835 0.18254647 0.30175537 prediction 0.419484124179866 Functional Loss - RGMB ENSG00000174136 CDS Human protein_coding chr5:98109837 chr5:98109838 nonsynonymous SNV 0.621 1 22 hm5C_associated_SNPs_90079 0 0 2 DDX3X POSTAR2 ENCODE chr5:98109830-98109873
64251 chr7 99661434 99661434 1 + G A BLCA 99661431 + 99661411 99661451 41 ATTGCAGATTGAGTACCCAGCACGAGGAATCAGCAGATGAG ATTGCAGATTGAGTACCCAGCACAAGGAATCAGCAGATGAG < 41bp 0.800343053844057 0.590601867359229 0.13511452 0.112863034 prediction 0.419482372969657 Functional Loss - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99661431 chr7:99661434 nonsynonymous SNV 0.042 1 24 hm5C_associated_SNPs_90080 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:99661407-99661441
64251 chr22 46134638 46134638 1 + G A COAD 46134635 + 46134615 46134655 41 CACTGGCTACAATTAGGCTTCTCGACGTCCTGTGCGAAATG CACTGGCTACAATTAGGCTTCTCAACGTCCTGTGCGAAATG < 41bp 0.709740529450695 0.46446827997911 0.20580018 0.5561438 prediction 0.419481058901391 Functional Loss - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46134635 chr22:46134638 nonsynonymous SNV 0.705 1 24 hm5C_associated_SNPs_90081 0 0 5 MOV10 POSTAR2 GSE37524,GSM921128 chr22:46134615-46134638
64251 chr11 249015 249015 1 + C T UCEC 249012 + 248992 249032 41 CTCTATGCCTTCAACAGTGGCAACGTAGAGCGGTTCCAGAC CTCTATGCCTTCAACAGTGGCAATGTAGAGCGGTTCCAGAC < 41bp 0.709738723154591 0.489672584337373 0.059676766 0.11467168 prediction 0.419477446309182 Functional Loss - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:249012 chr11:249015 synonymous SNV . 0 24 hm5C_associated_SNPs_90082 0 0 9 YTHDF3 POSTAR2 GSE78030,GSM2064707 chr11:249000-249020
64251 chr12 120750766 120750766 1 + G A UCEC 120750763 + 120750743 120750783 41 AATACTGAACATTGGGCCCACACGGTCGGATGACTTGGCGT AATACTGAACATTGGGCCCACACAGTCGGATGACTTGGCGT < 41bp 0.796293427283557 0.586558813073084 0.43864006 0.098748624 prediction 0.419469228420947 Functional Loss - SIRT4 ENSG00000089163 CDS Human protein_coding chr12:120750763 chr12:120750766 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_90084 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr12:120750757-120750789
64251 chr11 8933064 8933064 1 + G A rs1133833 8933061 + 8933041 8933081 41 ACGTTCCCTGCAGCGTTCAGCAAGGCTGGCTCTAGAAGTGC ACGTTCCCTGCAGCGTTCAGCAAAGCTGGCTCTAGAAGTGC < 41bp 0.802622818375256 0.592890264093244 0.8715228 0.56961066 prediction 0.419465108564023 Functional Loss - AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8933061 chr11:8933064 nonsynonymous SNV 0.470 2 24 hm5C_associated_SNPs_90085 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr11:8933041-8933071
64251 chrX 41203552 41203552 1 + C T DLBC 41203549 + 41203529 41203569 41 ATGGTGGTGCCGATATTGGTCAGCAGATTCGAGACTTGGAA ATGGTGGTGCCGATATTGGTCAGTAGATTCGAGACTTGGAA < 41bp 0.741393412141969 0.531672752169675 0.43499005 0.35792437 prediction 0.419441319944586 Functional Loss - DDX3X ENSG00000215301 CDS Human protein_coding chrX:41203549 chrX:41203552 stopgain 1.000 1 24 hm5C_associated_SNPs_90096 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:41203500-41203560
64251 chr17 71232128 71232128 1 + T C PAAD 71232127 + 71232107 71232147 41 TCGATGTAATCCTTCAGAAGCTGGAGCGTCTTTACTGGTTG TCGATGTAATCCTTCAGAAGCCGGAGCGTCTTTACTGGTTG < 41bp 0.791177305559859 0.581471729645956 0.44688267 0.388765 prediction 0.419411151827807 Functional Loss - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232127 chr17:71232128 synonymous SNV . 0 22 hm5C_associated_SNPs_90112 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:71232121-71232143
64251 chr14 24641958 24641958 1 + C T BLCA 24641956 + 24641936 24641976 41 GCGGCAGCCGGTTGGTGAAGCGCGAATACCTGAGGGTGAAT GCGGCAGCCGGTTGGTGAAGCGTGAATACCTGAGGGTGAAT < 41bp 0.852103610525347 0.642398214464269 0.49572912 0.37826738 prediction 0.419410792122155 Functional Loss - REC8 ENSG00000100918 CDS Human protein_coding chr14:24641956 chr14:24641958 synonymous SNV . 0 23 hm5C_associated_SNPs_90113 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24641922-24641960
64251 chr2 71170816 71170816 1 + G T COAD 71170813 + 71170793 71170833 41 AGGACTGTGTGCAGCGTGAACGGGCCCCTGGTGGTGCTGGA AGGACTGTGTGCAGCGTGAACGGTCCCCTGGTGGTGCTGGA < 41bp 0.709704716906278 0.386657950799668 0.5680577 0.20592016 prediction 0.419409433812555 Functional Loss - ATP6V1B1 ENSG00000116039 CDS Human protein_coding chr2:71170813 chr2:71170816 synonymous SNV . 0 24 hm5C_associated_SNPs_90115 0 0 1 PRPF8 POSTAR2 ENCODE chr2:71170793-71170871
64251 chr20 61296364 61296364 1 + C T rs145175877 61296361 + 61296341 61296381 41 GCCACCGAGGCCACTCTCATCACCGGCATGTCCACGTTCAG GCCACCGAGGCCACTCTCATCACTGGCATGTCCACGTTCAG < 41bp 0.70970398660939 0.499097165864732 0.10170588 0.25640905 prediction 0.41940797321878 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296361 chr20:61296364 synonymous SNV . 0 24 hm5C_associated_SNPs_90116 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61296350-61296370
64251 chr11 48190903 48190903 1 + C T rs190583556 48190901 + 48190881 48190921 41 TCCTCAAAGGAATGAGTTGGCCCGGCTAGGGTGGGCCCTCT TCCTCAAAGGAATGAGTTGGCCTGGCTAGGGTGGGCCCTCT < 41bp 0.710335825970994 0.500633191405582 0.31985706 0.40028 prediction 0.419405269130825 Functional Loss - PTPRJ ENSG00000149177;ENSG00000175619 intergenic Human other chr11:48190901 chr11:48190903 . . 0 23 hm5C_associated_SNPs_90117 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:48190894-48190927
64251 chr16 67899124 67899124 1 + G C LUAD 67899123 + 67899103 67899143 41 AATGATAGAACCCAACTAGGCGCAATTTACGTAAGTTTCCA AATGATAGAACCCAACTAGGCCCAATTTACGTAAGTTTCCA < 41bp 0.709701655535573 0.401750156781267 0.047620654 0.059101433 prediction 0.419403311071145 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67899123 chr16:67899124 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_90118 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:67899082-67899125
64251 chr16 67899125 67899125 1 + C T STAD 67899123 + 67899103 67899143 41 AATGATAGAACCCAACTAGGCGCAATTTACGTAAGTTTCCA AATGATAGAACCCAACTAGGCGTAATTTACGTAAGTTTCCA < 41bp 0.709701655535573 0.430534798062595 0.047620654 0.13454452 prediction 0.419403311071145 Functional Loss - NUTF2 ENSG00000102898 CDS Human protein_coding chr16:67899123 chr16:67899125 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_90119 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:67899082-67899125
64251 chr12 7288893 7288893 1 + G A UCEC 7288890 + 7288870 7288910 41 GAGACCTGTGATGAACCACTCTGGAACATTCAGGCCACCAT GAGACCTGTGATGAACCACTCTGAAACATTCAGGCCACCAT < 41bp 0.782603099128161 0.572909003020816 0.60392755 0.30658102 prediction 0.41938819221469 Functional Loss - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7288890 chr12:7288893 stopgain 0.995 1 24 hm5C_associated_SNPs_90122 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:7288893-7288915
64251 chr10 7763676 7763676 1 + C T COAD 7763673 + 7763653 7763693 41 ATGCCCTAACTGCCGGGAGACTGCGGTAGATGGGGAACTGG ATGCCCTAACTGCCGGGAGACTGTGGTAGATGGGGAACTGG < 41bp 0.76897566657766 0.559285035296085 0.79328716 0.32948655 prediction 0.419381262563151 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7763673 chr10:7763676 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_90126 0 0 6 LIN28B POSTAR2 ENCODE chr10:7763660-7763689
64251 chr10 17702545 17702545 1 + T C rs41289333 17702544 + 17702524 17702564 41 TAAAGTTGGTCAGTCTCGCACTGGGTAAGTATTTAGCGTTT TAAAGTTGGTCAGTCTCGCACCGGGTAAGTATTTAGCGTTT < 41bp 0.709686994339955 0.479746744931791 0.83516365 0.88604766 prediction 0.419373988679911 Functional Loss - STAM ENSG00000136738 CDS Human protein_coding chr10:17702544 chr10:17702545 synonymous SNV . 0 22 hm5C_associated_SNPs_90129 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:17702536-17702571
64251 chr7 152550658 152550658 1 + C T STAD 152550656 + 152550636 152550676 41 TTCGGAGGCTCCATGCTGGCCTCGACTGTAAGTCCCTCTCT TTCGGAGGCTCCATGCTGGCCTTGACTGTAAGTCCCTCTCT < 41bp 0.846315479495028 0.636633511044766 0.30402213 0.12335244 prediction 0.419363936900525 Functional Loss - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152550656 chr7:152550658 nonsynonymous SNV 0.945 3 23 hm5C_associated_SNPs_90133 0 0 2 PRPF8 POSTAR2 ENCODE chr7:152550653-152550703
64251 chr1 160326498 160326498 1 + G A COAD 160326495 + 160326475 160326515 41 TGGCACAGTGGTCAACCTCACCCGAGAGCAGTGCCAGGATC TGGCACAGTGGTCAACCTCACCCAAGAGCAGTGCCAGGATC < 41bp 0.809146214289688 0.599465307285732 0.08586806 0.07017431 prediction 0.419361814007911 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160326495 chr1:160326498 nonsynonymous SNV 0.981 0 24 hm5C_associated_SNPs_90136 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:160326472-160326498
64251 chr8 27516476 27516476 1 + C T HNSC 27516473 + 27516453 27516493 41 CAGAACTACACACGGCTCTTCAGCGGCCTGCGCACCACCTC CAGAACTACACACGGCTCTTCAGTGGCCTGCGCACCACCTC < 41bp 0.722976390311143 0.513296708985103 0.6400482 0.4485445 prediction 0.41935936265208 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516473 chr8:27516476 synonymous SNV . 0 24 hm5C_associated_SNPs_90139 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27516425-27516499
64251 chr6 33372980 33372980 1 + C T rs140485896 33372977 + 33372957 33372997 41 GGGCACCAGCTCCCCCAACTCGCCATGATTTTTCCTTTGAC GGGCACCAGCTCCCCCAACTCGCTATGATTTTTCCTTTGAC < 41bp 0.772569953199025 0.562894545250067 0.4497949 0.25144488 prediction 0.419350815897915 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33372977 chr6:33372980 nonsynonymous SNV 0.399 1 24 hm5C_associated_SNPs_90144 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:33372972-33373017
64251 chr17 42428482 42428482 1 + C T LIHC 42428479 + 42428459 42428499 41 CTGATCCAGAGTAAGTGCCTCTCCAAGGAGAACGCTACCAC CTGATCCAGAGTAAGTGCCTCTCTAAGGAGAACGCTACCAC < 41bp 0.709674972254395 0.47441703564863 0.9450507 0.9044062 prediction 0.419349944508789 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42428479 chr17:42428482 synonymous SNV . 0 24 hm5C_associated_SNPs_90146 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:42428441-42428492
64251 chr8 98656866 98656866 1 + G C LUAD 98656865 + 98656845 98656885 41 CCTCGACCTGGGGCTGGAGCCGAAACGGTACCCCGGCTGGG CCTCGACCTGGGGCTGGAGCCCAAACGGTACCCCGGCTGGG < 41bp 0.88862743186297 0.678953674701979 0.7797948 0.4011591 prediction 0.419347514321981 Functional Loss - MTDH ENSG00000147649 CDS Human protein_coding chr8:98656865 chr8:98656866 synonymous SNV . 0 22 hm5C_associated_SNPs_90149 0 0 6 DDX3X POSTAR2 ENCODE chr8:98656834-98656867
64251 chr1 55207145 55207145 1 + A C LUSC 55207144 + 55207124 55207164 41 GTAGGATCCTCTCCTTTTTGCAAGAATTTTCTCCGGGGGAG GTAGGATCCTCTCCTTTTTGCCAGAATTTTCTCCGGGGGAG < 41bp 0.709672146961912 0.45453561739141 0.26894397 0.31103504 prediction 0.419344293923825 Functional Loss - TTC4 ENSG00000243725 CDS Human protein_coding chr1:55207144 chr1:55207145 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_90152 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:55207140-55207160
64251 chr3 148876570 148876570 1 + G A BLCA 148876567 + 148876547 148876587 41 GAGGATGGATTACAGAAATACGAGAGAGGATTAATCTTTTA GAGGATGGATTACAGAAATACGAAAGAGGATTAATCTTTTA < 41bp 0.774901171678192 0.565230272036825 0.24107909 0.17668405 prediction 0.419341799282733 Functional Loss - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148876567 chr3:148876570 synonymous SNV . 0 24 hm5C_associated_SNPs_90154 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:148876540-148876601
64251 chr21 47552262 47552262 1 + G A rs138074469 47552259 + 47552239 47552279 41 GTGTTCCTCACGGACGGCGTCACGGGCAACGACAGTCTGCA GTGTTCCTCACGGACGGCGTCACAGGCAACGACAGTCTGCA < 41bp 0.709661729576308 0.472770745187903 0.7553622 0.70113987 prediction 0.419323459152616 Functional Loss - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552259 chr21:47552262 synonymous SNV . 0 24 hm5C_associated_SNPs_90157 3 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:47552262-47552263
64251 chr2 27304967 27304967 1 + G T COAD 27304963 + 27304943 27304983 41 CTCCTCAGGTCCTGGGGAGTCAGAGAAGGTGCAGCAGCTGG CTCCTCAGGTCCTGGGGAGTCAGATAAGGTGCAGCAGCTGG < 41bp 0.729322783016708 0.519661713232155 0.89117444 0.83614075 prediction 0.419322139569106 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27304963 chr2:27304967 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_90158 0 0 3 BUD13 POSTAR2 ENCODE chr2:27304938-27304972
64251 chr1 151263209 151263209 1 + C T UCEC 151263206 + 151263186 151263226 41 TTCAGGGGCCAGGTCGGAAACGCCGCCAGTCTTCTGACTCT TTCAGGGGCCAGGTCGGAAACGCTGCCAGTCTTCTGACTCT < 41bp 0.709648037849454 0.492591984059838 0.41619697 0.20698002 prediction 0.419296075698907 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263206 chr1:151263209 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_90163 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:151263208-151263246
64251 chr4 1388339 1388339 1 + C T UCEC 1388337 + 1388317 1388357 41 TTGTGCCAATGTGGAGTGCCCGCCTGCTCACACGTGCCCAT TTGTGCCAATGTGGAGTGCCCGTCTGCTCACACGTGCCCAT < 41bp 0.794574291804854 0.584934448699925 0.026204497 0.036364466 prediction 0.419279686209858 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388337 chr4:1388339 nonsynonymous SNV 0.030 0 23 hm5C_associated_SNPs_90168 0 0 2 DROSHA POSTAR2 ENCODE chr4:1388298-1388407
64251 chr14 38091544 38091544 1 + A C rs181566041 38091540 + 38091520 38091560 41 TGTCCGCGGCCGCCCTCCTGCAGGAGGTGCTCGGAGGCGCG TGTCCGCGGCCGCCCTCCTGCAGGCGGTGCTCGGAGGCGCG < 41bp 0.913119188170625 0.703479924511159 0.88394636 0.86206686 prediction 0.419278527318933 Functional Loss - TTC6 ENSG00000139865 CDS Human protein_coding chr14:38091540 chr14:38091544 nonsynonymous SNV 0.075 0 25 hm5C_associated_SNPs_90170 0 0 3 GRWD1 POSTAR2 ENCODE chr14:38091495-38091551
64251 chr5 140784373 140784373 1 + G A UCEC 140784370 + 140784350 140784390 41 GCCAGTGAGCCAGGGCTCTTCTCGGTGGGGCTGCACACAGG GCCAGTGAGCCAGGGCTCTTCTCAGTGGGGCTGCACACAGG < 41bp 0.820291170136834 0.610652061432798 0.6204977 0.39772418 prediction 0.41927821740807 Functional Loss - PCDHGA9 ENSG00000261934 CDS Human protein_coding chr5:140784370 chr5:140784373 synonymous SNV . 0 24 hm5C_associated_SNPs_90171 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr5:140784356-140784382
64251 chr19 14070099 14070099 1 + C T LUAD 14070097 + 14070077 14070117 41 GGGCGGGGTCCCTGAGGAAGCCCGGCCTGCCCTGTGCCCAG GGGCGGGGTCCCTGAGGAAGCCTGGCCTGCCCTGTGCCCAG < 41bp 0.813532218373442 0.603896361204248 0.44463104 0.31198227 prediction 0.419271714338389 Functional Loss - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070097 chr19:14070099 nonsynonymous SNV 0.067 2 23 hm5C_associated_SNPs_90174 0 0 1 RPS3 POSTAR2 ENCODE chr19:14070075-14070142
64251 chr11 61491043 61491043 1 + C T UCEC 61491040 + 61491020 61491060 41 GTAACCTGCGGACCTACAACCTGCGGTCAGTCAGCGGGCTG GTAACCTGCGGACCTACAACCTGTGGTCAGTCAGCGGGCTG < 41bp 0.712081009438207 0.502445721182916 0.5733684 0.3841143 prediction 0.41927057651058 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61491040 chr11:61491043 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_90175 0 0 1 PRPF8 POSTAR2 ENCODE chr11:61491034-61491083
64251 chr11 1857820 1857820 1 + C T SKCM 1857818 + 1857798 1857838 41 GCTGGGCCCGCCGGCTGCCACTCAGGTGAGGTGCTGGTCAC GCTGGGCCCGCCGGCTGCCACTTAGGTGAGGTGCTGGTCAC < 41bp 0.816901434164647 0.607268635959562 0.2101917 0.32862812 prediction 0.419265596410171 Functional Loss - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1857818 chr11:1857820 stopgain 0.011 0 23 hm5C_associated_SNPs_90177 0 0 1 PPIG POSTAR2 ENCODE chr11:1857768-1857822
64251 chr12 121132708 121132708 1 + G A KIRC 121132705 + 121132685 121132725 41 GTGTTGGGCATAGCACAGCTCACGATGAAATTATACCTATG GTGTTGGGCATAGCACAGCTCACAATGAAATTATACCTATG < 41bp 0.79603314629124 0.586400403756872 0.58538467 0.15125963 prediction 0.419265485068736 Functional Loss - MLEC ENSG00000110917 CDS Human protein_coding chr12:121132705 chr12:121132708 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_90178 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:121132643-121132741
64251 chr16 89169066 89169066 1 + G A LUSC 89169063 + 89169043 89169083 41 CCAAAGACGACGTGATCCTCCACGTGCTCCCGCTGCACCAC CCAAAGACGACGTGATCCTCCACATGCTCCCGCTGCACCAC < 41bp 0.814323423174762 0.604695416515595 0.64326936 0.20935798 prediction 0.419256013318334 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89169063 chr16:89169066 nonsynonymous SNV 0.891 1 24 hm5C_associated_SNPs_90182 0 0 1 PPIG POSTAR2 ENCODE chr16:89169057-89169100
64251 chr19 17263502 17263502 1 + G T UCEC 17263500 + 17263480 17263520 41 AAAAGTCTCGCCTGGTGTCTCAGGAGAAGGATGAGAGGTAG AAAAGTCTCGCCTGGTGTCTCATGAGAAGGATGAGAGGTAG < 41bp 0.70962275192534 0.362891612048507 0.88458973 0.4160361 prediction 0.419245503850679 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17263500 chr19:17263502 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_90185 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr19:17263469-17263503
64251 chr14 32560564 32560564 1 + G A UCEC 32560561 + 32560541 32560581 41 TCTTGTAGTGGAAACATCAGCACGATTTAATGTCAACATTG TCTTGTAGTGGAAACATCAGCACAATTTAATGTCAACATTG < 41bp 0.732701810571775 0.523086522063675 0.20017403 0.12557977 prediction 0.419230577016198 Functional Loss - ARHGAP5 ENSG00000100852 CDS Human protein_coding chr14:32560561 chr14:32560564 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90192 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:32560560-32560581
64251 chr16 89178534 89178534 1 + G T LUSC 89178531 + 89178511 89178551 41 GTTCTTAAGTTCTGAAACGCCGCGGATCAATGTCTTTATGG GTTCTTAAGTTCTGAAACGCCGCTGATCAATGTCTTTATGG < 41bp 0.709614478758474 0.323657120991842 0.1943042 0.25056618 prediction 0.419228957516949 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89178531 chr16:89178534 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_90195 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89178516-89178535
64251 chr16 89178533 89178533 1 + C T UCEC 89178531 + 89178511 89178551 41 GTTCTTAAGTTCTGAAACGCCGCGGATCAATGTCTTTATGG GTTCTTAAGTTCTGAAACGCCGTGGATCAATGTCTTTATGG < 41bp 0.709614478758474 0.450298820154562 0.1943042 0.19699562 prediction 0.419228957516949 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89178531 chr16:89178533 nonsynonymous SNV 0.007 2 23 hm5C_associated_SNPs_90196 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:89178516-89178535
64251 chr16 30409115 30409115 1 + C T LUSC 30409113 + 30409093 30409133 41 CCAGGGTCCCCCAAAGATTCCTCGGTCCCGGATCCCTGCTG CCAGGGTCCCCCAAAGATTCCTTGGTCCCGGATCCCTGCTG < 41bp 0.831981979954609 0.62237281302525 0.1734342 0.1813482 prediction 0.419218333858719 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409113 chr16:30409115 nonsynonymous SNV 0.963 3 23 hm5C_associated_SNPs_90200 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30409100-30409120
64251 chr17 46137559 46137559 1 + C T rs571765903 46137557 + 46137537 46137577 41 ACCCCGGGGGGGGTGGGGTACACAGACACAGGGTGGGGGTG ACCCCGGGGGGGGTGGGGTACATAGACACAGGGTGGGGGTG < 41bp 0.709608696792397 0.476975828955427 0.4847103 0.36827466 prediction 0.419217393584795 Functional Loss - NFE2L1 ENSG00000082641 UTR3 Human protein_coding chr17:46137557 chr17:46137559 . . 0 23 hm5C_associated_SNPs_90201 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:46137555-46137577
64251 chr22 39884247 39884247 1 + G T LUAD 39884244 + 39884224 39884264 41 ACCTGCGCACCTTCCTCACCCAGGACGGCGTCTCGCGGCTG ACCTGCGCACCTTCCTCACCCAGTACGGCGTCTCGCGGCTG < 41bp 0.937875305473541 0.728269578249219 0.85282606 0.08414698 prediction 0.419211454448644 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884244 chr22:39884247 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_90203 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr22:39884230-39884264
64251 chr8 22465547 22465547 1 + G A STAD 22465544 + 22465524 22465564 41 ACCTGAACAGATTTCCTGCCCGGGGCCCTCATGGACGGTTG ACCTGAACAGATTTCCTGCCCGGAGCCCTCATGGACGGTTG < 41bp 0.821018972578088 0.611414642782283 0.68710726 0.29984802 prediction 0.419208659591609 Functional Loss - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22465544 chr8:22465547 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_90205 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:22465533-22465553
64251 chr16 30409299 30409299 1 + G T LUAD 30409297 + 30409277 30409317 41 ATCAAGCACCAGCGGACACACCGGGGGGAGCAGCCCCCCCG ATCAAGCACCAGCGGACACACCTGGGGGAGCAGCCCCCCCG < 41bp 0.918008003004178 0.708408345475924 0.9274392 0.612964 prediction 0.419199315056509 Functional Loss - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409297 chr16:30409299 nonsynonymous SNV 0.308 1 23 hm5C_associated_SNPs_90210 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:30409260-30409300
64251 chr5 68706340 68706340 1 + G T UCEC 68706337 + 68706317 68706357 41 CAGCTCAGATTTCTTTTATCCAAGATATTGGAAGGCTCCCT CAGCTCAGATTTCTTTTATCCAATATATTGGAAGGCTCCCT < 41bp 0.709599094974308 0.344074057134051 0.4671789 0.23569646 prediction 0.419198189948617 Functional Loss - RAD17 ENSG00000152942 CDS Human protein_coding chr5:68706337 chr5:68706340 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90211 0 0 1 BUD13 POSTAR2 ENCODE chr5:68706336-68706413
64251 chr2 118583133 118583133 1 + A T OV 118583129 + 118583109 118583149 41 AGCGAGAGGACTAGACATTCCTGAAGTCGACTGGATTGTTC AGCGAGAGGACTAGACATTCCTGATGTCGACTGGATTGTTC < 41bp 0.893786514272614 0.684190147614475 0.40788794 0.29525185 prediction 0.419192733316278 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118583129 chr2:118583133 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_90212 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr2:118583087-118583146
64251 chr1 25627529 25627529 1 + G A rs77813628 25627526 + 25627506 25627546 41 TGCCTGCCAAAGCCTCTACCCGAGGGAACGGAGGATAAAGA TGCCTGCCAAAGCCTCTACCCGAAGGAACGGAGGATAAAGA < 41bp 0.709590804734867 0.465440779959772 0.842443 0.33253825 prediction 0.419181609469733 Functional Loss - RHD ENSG00000187010 CDS Human protein_coding chr1:25627526 chr1:25627529 synonymous SNV . 0 24 hm5C_associated_SNPs_90217 0 0 2 SND1 POSTAR2 ENCODE chr1:25627448-25627532
64251 chr17 45753793 45753793 1 + T C COAD 45753792 + 45753772 45753812 41 CAGTGTTGGGTGGTGAATTCCTCAAGTACATGGAGGCCTTT CAGTGTTGGGTGGTGAATTCCCCAAGTACATGGAGGCCTTT < 41bp 0.709581476401231 0.435461339942179 0.7483171 0.12891802 prediction 0.419162952802462 Functional Loss - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45753792 chr17:45753793 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_90221 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:45753713-45753811
64251 chr17 4800048 4800048 1 + C T rs201261291 4800045 + 4800025 4800065 41 TCTGTGGAGACGGGCCACCTCGACGGGGTCTTCATGCACAA TCTGTGGAGACGGGCCACCTCGATGGGGTCTTCATGCACAA < 41bp 0.736495312689697 0.526913863724683 0.590512 0.24802697 prediction 0.419162897930027 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800045 chr17:4800048 synonymous SNV . 0 24 hm5C_associated_SNPs_90222 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4800022-4800060
64251 chr5 157178427 157178427 1 + C T SARC 157178424 + 157178404 157178444 41 AAGGCAGCCCTCTGGGTGAACTCCATCGCTGTATCCGTGAG AAGGCAGCCCTCTGGGTGAACTCTATCGCTGTATCCGTGAG < 41bp 0.789836855461203 0.580255530017379 0.95157623 0.9020126 prediction 0.419162650887647 Functional Loss - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157178424 chr5:157178427 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_90223 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:157178407-157178429
64251 chr18 670798 670798 1 + C T LUAD 670796 + 670776 670816 41 AGAGATCGGGAGACATGGGCCTCGGTGTGCCTTTCAACATC AGAGATCGGGAGACATGGGCCTTGGTGTGCCTTTCAACATC < 41bp 0.870055362115046 0.660474108392969 0.6678439 0.28673762 prediction 0.419162507444154 Functional Loss - TYMS ENSG00000176890 CDS Human protein_coding chr18:670796 chr18:670798 synonymous SNV . 0 23 hm5C_associated_SNPs_90224 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:670779-670804
64251 chr17 33591261 33591261 1 + C T OV 33591258 + 33591238 33591278 41 TCTACAAGGAACTCTTCTCACAACATAAAGGACTCAGAGAC TCTACAAGGAACTCTTCTCACAATATAAAGGACTCAGAGAC < 41bp 0.72626336356498 0.516685870877773 0.17288092 0.16713911 prediction 0.419154985374414 Functional Loss - SLFN5 ENSG00000166750 CDS Human protein_coding chr17:33591258 chr17:33591261 nonsynonymous SNV 0.795 0 24 hm5C_associated_SNPs_90226 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:33591246-33591290
64251 chr12 124497191 124497191 1 + G A SKCM 124497188 + 124497168 124497208 41 CATGCATCAAAGAGTCCACACAGGAGAGAAACCCTATAAAT CATGCATCAAAGAGTCCACACAGAAGAGAAACCCTATAAAT < 41bp 0.810326787057734 0.600749625168424 0.18318814 0.019616038 prediction 0.419154323778619 Functional Loss - ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497188 chr12:124497191 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_90227 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124497122-124497237
64251 chr1 156348183 156348183 1 + C T LAML 156348180 + 156348160 156348200 41 GTCTACCATTCAGACCTCTTCGCCATGATTGGTGAGGCCTT GTCTACCATTCAGACCTCTTCGCTATGATTGGTGAGGCCTT < 41bp 0.757262705186478 0.547686673014021 0.8198881 0.27326483 prediction 0.419152064344915 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348180 chr1:156348183 synonymous SNV . 0 24 hm5C_associated_SNPs_90228 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156348182-156348220
64251 chr11 33047239 33047239 1 + G T GBM 33047236 + 33047216 33047256 41 GCTCAGAAGCCATTTGGAGCCACGTATGTATGGAGCAGCAT GCTCAGAAGCCATTTGGAGCCACTTATGTATGGAGCAGCAT < 41bp 0.709575534853361 0.328941431459149 0.14058611 0.08962047 prediction 0.419151069706723 Functional Loss - DEPDC7 ENSG00000121690 CDS Human protein_coding chr11:33047236 chr11:33047239 synonymous SNV . 0 24 hm5C_associated_SNPs_90229 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr11:33047226-33047250
64251 chr19 57743984 57743984 1 + C T GBM 57743981 + 57743961 57744001 41 GTACCTGATTCTGGAATATGCTCCAAGGGGTGAGCTCTACA GTACCTGATTCTGGAATATGCTCTAAGGGGTGAGCTCTACA < 41bp 0.805808397760854 0.596236160038925 0.9426056 0.9167238 prediction 0.419144475443858 Functional Loss - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743981 chr19:57743984 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_90231 0 0 1 ZNF622 POSTAR2 ENCODE chr19:57743948-57744043
64251 chr2 48573679 48573679 1 + C T UCEC 48573676 + 48573656 48573696 41 CCAGAACCCAGAAAAAAAATCAGCGACTTCAAAGCCCCCAT CCAGAACCCAGAAAAAAAATCAGTGACTTCAAAGCCCCCAT < 41bp 0.721466931849423 0.511897055648111 0.30053088 0.4180075 prediction 0.419139752402624 Functional Loss - FOXN2 ENSG00000170802 CDS Human protein_coding chr2:48573676 chr2:48573679 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_90233 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:48573653-48573681
64251 chr3 101280710 101280710 1 + C T rs4683930 101280708 + 101280688 101280728 41 CGGCTGAGCCCCAGCGACCGCTCTGGTCGGCTGTGTAGACT CGGCTGAGCCCCAGCGACCGCTTTGGTCGGCTGTGTAGACT < 41bp 0.709568338134424 0.475359042256054 0.072717816 0.090645075 prediction 0.419136676268848 Functional Loss - TRMT10C ENSG00000174173 UTR5 Human protein_coding chr3:101280708 chr3:101280710 . . 0 23 hm5C_associated_SNPs_90235 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:101280709-101280710
64251 chr19 44590299 44590299 1 + G T GBM 44590295 + 44590275 44590315 41 ACTCACAACTGCAAACTCATCAGAGAATCCACACTGGAGAG ACTCACAACTGCAAACTCATCAGATAATCCACACTGGAGAG < 41bp 0.74321041305384 0.53364424744905 0.42840546 0.47041613 prediction 0.41913233120958 Functional Loss - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44590295 chr19:44590299 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_90236 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44590280-44590318
64251 chr10 102750280 102750280 1 + C T UCEC 102750278 + 102750258 102750298 41 ACCTGCAGTTCATGATGGGTCACGAGCAGCTGTCCACAGAC ACCTGCAGTTCATGATGGGTCATGAGCAGCTGTCCACAGAC < 41bp 0.86232754795338 0.652763752366126 0.08850494 0.09911832 prediction 0.419127591174507 Functional Loss - TWNK ENSG00000107815 CDS Human protein_coding chr10:102750278 chr10:102750280 synonymous SNV . 0 23 hm5C_associated_SNPs_90239 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:102750218-102750296
64251 chr9 96422788 96422788 1 + C T rs73523907 96422786 + 96422766 96422806 41 CCATCCCCAACCTGGACCTGCTCGAAGCCCACACCAAGGAG CCATCCCCAACCTGGACCTGCTTGAAGCCCACACCAAGGAG < 41bp 0.709562101970109 0.413469063368885 0.24645609 0.18559375 prediction 0.419124203940218 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96422786 chr9:96422788 synonymous SNV . 0 23 hm5C_associated_SNPs_90241 0 0 3 DDX24 POSTAR2 ENCODE chr9:96422752-96422806
64251 chr9 96422789 96422789 1 + G A UCEC 96422786 + 96422766 96422806 41 CCATCCCCAACCTGGACCTGCTCGAAGCCCACACCAAGGAG CCATCCCCAACCTGGACCTGCTCAAAGCCCACACCAAGGAG < 41bp 0.709562101970109 0.453359493934972 0.24645609 0.3295895 prediction 0.419124203940218 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96422786 chr9:96422789 nonsynonymous SNV 0.944 4 24 hm5C_associated_SNPs_90242 0 0 3 DDX24 POSTAR2 ENCODE chr9:96422752-96422806
64251 chr11 864504 864504 1 + C T HNSC 864502 + 864482 864522 41 GCCATCCTCTTCTTCGCCTACACGGACAAGGTACGGCTGCC GCCATCCTCTTCTTCGCCTACATGGACAAGGTACGGCTGCC < 41bp 0.709562099377133 0.449342660445116 0.18432519 0.33049583 prediction 0.419124198754265 Functional Loss - TSPAN4 ENSG00000214063 CDS Human protein_coding chr11:864502 chr11:864504 nonsynonymous SNV 0.846 0 23 hm5C_associated_SNPs_90243 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:864458-864511
64251 chr7 73791082 73791082 1 + G C HNSC 73791081 + 73791061 73791101 41 AACAGGAGGTCGAGAGTTTGCGGGAGAAGCTCCTGGTGGCT AACAGGAGGTCGAGAGTTTGCCGGAGAAGCTCCTGGTGGCT < 41bp 0.891140696999401 0.681581427813202 0.93081075 0.9126076 prediction 0.419118538372397 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73791081 chr7:73791082 nonsynonymous SNV 0.980 1 22 hm5C_associated_SNPs_90245 0 0 1 GRWD1 POSTAR2 ENCODE chr7:73791007-73791106
64251 chr12 68051956 68051956 1 + T C rs148003575 68051955 + 68051935 68051975 41 GACGGGTTACCCCCTCTTGCCTGGGGAAGATGAAGGGGACC GACGGGTTACCCCCTCTTGCCCGGGGAAGATGAAGGGGACC < 41bp 0.793105949552031 0.583548613606166 0.9077481 0.9134887 prediction 0.419114671891729 Functional Loss - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051955 chr12:68051956 synonymous SNV . 0 22 hm5C_associated_SNPs_90246 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:68051921-68051958
64251 chr2 228221828 228221828 1 + C T UCEC 228221825 + 228221805 228221845 41 TTAATAGCTGGCTCTGGTTTCGCCGCTAGAGGTAACATCAG TTAATAGCTGGCTCTGGTTTCGCTGCTAGAGGTAACATCAG < 41bp 0.738495444327631 0.528940933677571 0.38318342 0.2358183 prediction 0.41910902130012 Functional Loss - MFF ENSG00000168958 CDS Human protein_coding chr2:228221825 chr2:228221828 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_90251 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:228221818-228221841
64251 chr16 30768961 30768961 1 + G T UCEC 30768957 + 30768937 30768977 41 CTTGGGTCTTGATGTAGGCTCGGAGGACGTGGATGTGGCCT CTTGGGTCTTGATGTAGGCTCGGATGACGTGGATGTGGCCT < 41bp 0.756574158142099 0.547022658080963 0.8908473 0.795756 prediction 0.419103000122273 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30768957 chr16:30768961 nonsynonymous SNV 0.125 3 25 hm5C_associated_SNPs_90253 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30768930-30768971
64251 chr17 61895297 61895297 1 + G T UCEC 61895294 + 61895274 61895314 41 CCTACCCGTCTGCCGGAGCCCAAGGAGTCAACAACACAGCT CCTACCCGTCTGCCGGAGCCCAATGAGTCAACAACACAGCT < 41bp 0.709546857709857 0.310338768587958 0.9009676 0.34833828 prediction 0.419093715419715 Functional Loss - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61895294 chr17:61895297 stopgain 0.998 0 24 hm5C_associated_SNPs_90254 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:61895272-61895297
64251 chr16 88738461 88738461 1 + G A rs147373909 88738458 + 88738438 88738478 41 GCTGTGACCATGAGGGCTATCCCGACGAGCTGCCGTGGACC GCTGTGACCATGAGGGCTATCCCAACGAGCTGCCGTGGACC < 41bp 0.784467210131829 0.574921605589546 0.4089593 0.34884465 prediction 0.419091209084566 Functional Loss - SNAI3-AS1 ENSG00000260630 ncRNA_exonic Human antisense chr16:88738458 chr16:88738461 . . 0 24 hm5C_associated_SNPs_90256 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:88738461-88738462
64251 chr8 48353063 48353063 1 + C T BLCA 48353061 + 48353041 48353081 41 CCAAGGAGACTGCAGGCTACCTCAGGGGCCGTCCCCAGGAC CCAAGGAGACTGCAGGCTACCTTAGGGGCCGTCCCCAGGAC < 41bp 0.814788609318967 0.605243075800322 0.20509142 0.05579886 prediction 0.419091067037289 Functional Loss - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48353061 chr8:48353063 synonymous SNV . 0 23 hm5C_associated_SNPs_90257 0 0 2 PPIG POSTAR2 ENCODE chr8:48353045-48353079
64251 chr6 26251911 26251911 1 + G A HNSC 26251908 + 26251888 26251928 41 CCAGCTAAGTCCGCTCCCGCCCCGAAGAAGGGCTCCAAGAA CCAGCTAAGTCCGCTCCCGCCCCAAAGAAGGGCTCCAAGAA < 41bp 0.777281452376269 0.567738985177313 0.3467984 0.21921656 prediction 0.419084934397912 Functional Loss - HIST1H2BH ENSG00000197459 CDS Human other chr6:26251908 chr6:26251911 synonymous SNV . 0 24 hm5C_associated_SNPs_90260 0 0 4 EIF3D POSTAR2 ENCODE chr6:26251884-26252016
64251 chr22 50615930 50615930 1 + G A STAD 50615927 + 50615907 50615947 41 GAGTTCACCTGCGCGCTGGGCGCGTCCCCGGACGGGGCGGC GAGTTCACCTGCGCGCTGGGCGCATCCCCGGACGGGGCGGC < 41bp 0.709541575070077 0.455531080021838 0.32778236 0.3108933 prediction 0.419083150140154 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615927 chr22:50615930 synonymous SNV . 0 24 hm5C_associated_SNPs_90262 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50615903-50615936
64251 chr16 67261759 67261759 1 + G C UCEC 67261758 + 67261738 67261778 41 GCCCAAGGGCAAAGTGGGCACGAGAGGGAAGAAGCAGATAT GCCCAAGGGCAAAGTGGGCACCAGAGGGAAGAAGCAGATAT < 41bp 0.895908010630982 0.686366777109604 0.5987758 0.50751173 prediction 0.419082467042754 Functional Loss - TMEM208 ENSG00000168701 CDS Human protein_coding chr16:67261758 chr16:67261759 synonymous SNV . 0 22 hm5C_associated_SNPs_90263 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:67261740-67261760
64251 chr1 162760587 162760587 1 + G C rs369084131 162760586 + 162760566 162760606 41 TGCTTGGAAGTGTGAGTGCGCGAAGATGCGAAAGGTGGTTT TGCTTGGAAGTGTGAGTGCGCCAAGATGCGAAAGGTGGTTT < 41bp 0.70953802613686 0.402605642299825 0.507249 0.33746397 prediction 0.419076052273721 Functional Loss - HSD17B7 ENSG00000132196 UTR5 Human protein_coding chr1:162760586 chr1:162760587 . . 0 22 hm5C_associated_SNPs_90266 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:162760587-162760588
64251 chr14 57876211 57876211 1 + C T UCEC 57876208 + 57876188 57876228 41 ATTTAAATGGAGTTGATGCACTGCGACTTAAACTGTGGCTG ATTTAAATGGAGTTGATGCACTGTGACTTAAACTGTGGCTG < 41bp 0.730664420187585 0.521129098292048 0.135647 0.2042869 prediction 0.419070643791075 Functional Loss - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57876208 chr14:57876211 stopgain 1.000 1 24 hm5C_associated_SNPs_90267 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:57876142-57876257
64251 chr17 68172450 68172450 1 + G A BLCA 68172447 + 68172427 68172467 41 TAGAGCCCAGGCCCTTACGGCGAGAGTCGGAGATATGACTG TAGAGCCCAGGCCCTTACGGCGAAAGTCGGAGATATGACTG < 41bp 0.786484947379389 0.576952680035153 0.81941473 0.41003737 prediction 0.419064534688473 Functional Loss - KCNJ2 ENSG00000123700 CDS Human protein_coding chr17:68172447 chr17:68172450 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_90268 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:68172429-68172471
64251 chr17 57290699 57290699 1 + C T GBM 57290696 + 57290676 57290716 41 TTGTAATGGGAAGAGGAAGACGGCGAGATGACATAGCTCGA TTGTAATGGGAAGAGGAAGACGGTGAGATGACATAGCTCGA < 41bp 0.709530103618346 0.491729443014084 0.5875211 0.5128415 prediction 0.419060207236692 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57290696 chr17:57290699 stopgain 0.993 1 24 hm5C_associated_SNPs_90271 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:57290665-57290705
64251 chr19 18964096 18964096 1 + C T HNSC 18964093 + 18964073 18964113 41 TGCAGGGGGATGAGATATGCCTGCGGTACAAAGGGGACCTT TGCAGGGGGATGAGATATGCCTGTGGTACAAAGGGGACCTT < 41bp 0.70952639327238 0.483528586639593 0.80478793 0.67273754 prediction 0.419052786544759 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18964093 chr19:18964096 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_90273 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:18964075-18964101
64251 chr9 6413524 6413524 1 + A C DLBC 6413523 + 6413503 6413543 41 GTTCGCACCATTGATGGCTCCAAGACGTGCACCATTGAGGA GTTCGCACCATTGATGGCTCCCAGACGTGCACCATTGAGGA < 41bp 0.709520350690957 0.459140272847091 0.087084204 0.14946109 prediction 0.419040701381914 Functional Loss - UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6413523 chr9:6413524 nonsynonymous SNV 0.965 0 22 hm5C_associated_SNPs_90278 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:6413489-6413533
64251 chr12 111785569 111785569 1 + G A SKCM 111785566 + 111785546 111785586 41 AGGCCCAAGTGAGGATCAAGCAGGAACAGATGGAGGAGGAT AGGCCCAAGTGAGGATCAAGCAGAAACAGATGGAGGAGGAT < 41bp 0.709512927719419 0.478011928287078 0.6872195 0.32523912 prediction 0.419025855438838 Functional Loss - CUX2 ENSG00000111249 CDS Human protein_coding chr12:111785566 chr12:111785569 nonsynonymous SNV 0.932 2 24 hm5C_associated_SNPs_90285 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:111785569-111785570
64251 chr20 1099430 1099430 1 + A T OV 1099426 + 1099406 1099446 41 CGCGGGCGCTCATGGCGGGCCTGGAGGTACTGTTCGCATCG CGCGGGCGCTCATGGCGGGCCTGGTGGTACTGTTCGCATCG < 41bp 0.88255798333621 0.673047187557632 0.5837277 0.5583673 prediction 0.419021591557158 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1099426 chr20:1099430 nonsynonymous SNV 0.826 4 25 hm5C_associated_SNPs_90287 0 0 10 EIF3D POSTAR2 GSE65004,GSM1585671 chr20:1099413-1099437
64251 chr17 80684371 80684371 1 + G T HNSC 80684368 + 80684348 80684388 41 CTGTGCAGGTGAATGACTGGCAGGAGGACTGGGTCGTGTTC CTGTGCAGGTGAATGACTGGCAGTAGGACTGGGTCGTGTTC < 41bp 0.937835202530461 0.728324608819869 0.9022877 0.49061838 prediction 0.419021187421184 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684368 chr17:80684371 stopgain 0.766 0 24 hm5C_associated_SNPs_90288 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:80684360-80684419
64251 chr19 39138465 39138465 1 + G T LUAD 39138463 + 39138443 39138483 41 AATGGCGCTGGCGGCGGGGGCAGCATGGGCGACTACATGGC AATGGCGCTGGCGGCGGGGGCATCATGGGCGACTACATGGC < 41bp 0.909333425138295 0.699827033289263 0.9000578 0.8858367 prediction 0.419012783698063 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39138463 chr19:39138465 nonsynonymous SNV 0.969 0 23 hm5C_associated_SNPs_90291 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39138443-39138473
64251 chr11 47281376 47281376 1 + G T UCEC 47281374 + 47281354 47281394 41 AGCTGTGGAAGCCAGGCGCACAGGATGCAAGCAGCCAGGCC AGCTGTGGAAGCCAGGCGCACATGATGCAAGCAGCCAGGCC < 41bp 0.919792014580854 0.710287249031821 0.56073356 0.24254388 prediction 0.419009531098067 Functional Loss - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47281374 chr11:47281376 nonsynonymous SNV 0.032 0 23 hm5C_associated_SNPs_90292 0 0 7 BUD13 POSTAR2 ENCODE chr11:47281327-47281383
64251 chr19 3381984 3381984 1 + C T ESCA 3381981 + 3381961 3382001 41 GAGCATCACCGGCAAGAAGGCGCCGGGCTGCGTGCTCTCCA GAGCATCACCGGCAAGAAGGCGCTGGGCTGCGTGCTCTCCA < 41bp 0.735409718808424 0.525917750464046 0.5412897 0.39452836 prediction 0.418983936688755 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381981 chr19:3381984 nonsynonymous SNV 0.989 2 24 hm5C_associated_SNPs_90298 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:3381950-3381985
64251 chr17 7577064 7577064 1 - T A KICH 7577068 - 7577048 7577088 41 ACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCACCA ACAGAGGAAGAGAATCTCCGCAAGTAAGGGGAGCCTCACCA < 41bp 0.864127024953645 0.654640242942896 0.2864797 0.27724922 prediction 0.418973564021497 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577068 chr17:7577064 stopgain 0.700 1 25 hm5C_associated_SNPs_90301 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7577025-7577068
64251 chrX 100088349 100088349 1 + G A CESC 100088346 + 100088326 100088366 41 GGAAGTCCGAGGGATGGAGGCCAGAGGCATGGATACCAGAG GGAAGTCCGAGGGATGGAGGCCAAAGGCATGGATACCAGAG < 41bp 0.709481443307001 0.464278853880155 0.8056059 0.3015771 prediction 0.418962886614002 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088346 chrX:100088349 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90305 0 0 1 UCHL5 POSTAR2 ENCODE chrX:100088297-100088380
64251 chr17 8170705 8170705 1 + G A UCEC 8170702 + 8170682 8170722 41 CCCCCAAGGTGGTCCCAGCCCCCGAGTCGCCATCTTGCGAG CCCCCAAGGTGGTCCCAGCCCCCAAGTCGCCATCTTGCGAG < 41bp 0.818962356786096 0.609483210769743 0.08502355 0.08286029 prediction 0.418958292032707 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8170702 chr17:8170705 nonsynonymous SNV 0.978 0 24 hm5C_associated_SNPs_90307 0 0 1 SF3B4 POSTAR2 ENCODE chr17:8170649-8170709
64251 chr6 138200157 138200157 1 + C T SKCM 138200155 + 138200135 138200175 41 CCGGGAAGTGCCAAGCCTGCCTCCAGGATGTTACCAGGACA CCGGGAAGTGCCAAGCCTGCCTTCAGGATGTTACCAGGACA < 41bp 0.709478522230692 0.402640349334269 0.9440865 0.10987088 prediction 0.418957044461385 Functional Loss - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200155 chr6:138200157 synonymous SNV 0.960 0 23 hm5C_associated_SNPs_90308 0 0 1 EIF3H POSTAR2 ENCODE chr6:138200131-138200185
64251 chr19 6534961 6534961 1 + C T SKCM 6534958 + 6534938 6534978 41 GCCAGCGCCTGGGCGTCCATCTTCACACTGAGGCCAGGGCA GCCAGCGCCTGGGCGTCCATCTTTACACTGAGGCCAGGGCA < 41bp 0.720713768940087 0.511243972395894 0.49652737 0.11999461 prediction 0.418939593088386 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6534958 chr19:6534961 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_90310 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:6534945-6534966
64251 chr1 44447061 44447061 1 + T C LUAD 44447060 + 44447040 44447080 41 CCCAACGCCACCGCCTCTAGCTCCGGGCTCCCTGAGGTCCC CCCAACGCCACCGCCTCTAGCCCCGGGCTCCCTGAGGTCCC < 41bp 0.83423847004947 0.62477074300115 0.65971535 0.7359967 prediction 0.41893545409664 Functional Loss - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44447060 chr1:44447061 nonsynonymous SNV 0.701 0 22 hm5C_associated_SNPs_90312 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44447042-44447069
64251 chr19 3115014 3115014 1 + C T UCEC 3115012 + 3114992 3115032 41 AGCAGGACGTGCTGCGGGTCCGCGTGCCCACCACCGGCATC AGCAGGACGTGCTGCGGGTCCGTGTGCCCACCACCGGCATC < 41bp 0.842975736863043 0.633509876958722 0.24045742 0.24482879 prediction 0.418931719808641 Functional Loss - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3115012 chr19:3115014 synonymous SNV . 0 23 hm5C_associated_SNPs_90313 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:3115002-3115030
64251 chr7 148481092 148481092 1 + G A rs115991100 148481089 + 148481069 148481109 41 GGTCGCTTCATAAACAACAACGCGGTTACCAAGATGGCCCA GGTCGCTTCATAAACAACAACGCAGTTACCAAGATGGCCCA < 41bp 0.803051331304516 0.593587387142955 0.10234493 0.068436325 prediction 0.418927888323122 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148481089 chr7:148481092 synonymous SNV . 0 24 hm5C_associated_SNPs_90314 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:148481083-148481109
64251 chrX 30236732 30236732 1 + G T LUAD 30236729 + 30236709 30236749 41 TCAGAAGAGTAAGCTCCGTGCCCGTGAGAAACGCCGCAAGG TCAGAAGAGTAAGCTCCGTGCCCTTGAGAAACGCCGCAAGG < 41bp 0.709460122813086 0.310058201626756 0.30799413 0.06395435 prediction 0.418920245626173 Functional Loss - MAGEB2 ENSG00000099399 CDS Human protein_coding chrX:30236729 chrX:30236732 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_90316 0 0 2 DDX3X POSTAR2 ENCODE chrX:30236692-30236760
64251 chr2 109087387 109087387 1 + C T rs540949615 109087385 + 109087365 109087405 41 TTACTGAAAAAGATGCCCTTCTCGAAACTGTGAATCGCCTC TTACTGAAAAAGATGCCCTTCTTGAAACTGTGAATCGCCTC < 41bp 0.709459484284166 0.409106719460034 0.87735754 0.06119269 prediction 0.418918968568331 Functional Loss - GCC2 ENSG00000135968 CDS Human protein_coding chr2:109087385 chr2:109087387 synonymous SNV . 0 23 hm5C_associated_SNPs_90317 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:109087366-109087395
64251 chr2 109087388 109087388 1 + G A STAD 109087385 + 109087365 109087405 41 TTACTGAAAAAGATGCCCTTCTCGAAACTGTGAATCGCCTC TTACTGAAAAAGATGCCCTTCTCAAAACTGTGAATCGCCTC < 41bp 0.709459484284166 0.485979489930686 0.87735754 0.27226055 prediction 0.418918968568331 Functional Loss - GCC2 ENSG00000135968 CDS Human protein_coding chr2:109087385 chr2:109087388 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_90318 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:109087366-109087395
64251 chr10 124189173 124189173 1 + G A COAD 124189170 + 124189150 124189190 41 CCGGTCCTTCAGAATCCAAACACGCTTTCCGTCCTACCAAC CCGGTCCTTCAGAATCCAAACACACTTTCCGTCCTACCAAC < 41bp 0.709458733564456 0.463028538488388 0.07120937 0.095541686 prediction 0.418917467128912 Functional Loss - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124189170 chr10:124189173 nonsynonymous SNV 0.035 0 24 hm5C_associated_SNPs_90319 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:124189160-124189180
64251 chr10 99211590 99211590 1 + C T SKCM 99211588 + 99211568 99211608 41 CTGCGCTCCCTGCTCTACAACTCCTTTGGGGGCAGTGACAC CTGCGCTCCCTGCTCTACAACTTCTTTGGGGGCAGTGACAC < 41bp 0.709455144359677 0.409008978134451 0.25089073 0.2557062 prediction 0.418910288719353 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211588 chr10:99211590 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_90326 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:99211581-99211599
64251 chr8 56737562 56737562 1 + G A rs143680928 56737559 + 56737539 56737579 41 GCCATGATCACAGCTCACTGCAGGTTCAGCCTTCTGAGTTC GCCATGATCACAGCTCACTGCAGATTCAGCCTTCTGAGTTC < 41bp 0.709451835005366 0.467060425083458 0.3707269 0.10127181 prediction 0.418903670010731 Functional Loss - TGS1 ENSG00000137574 UTR3 Human protein_coding chr8:56737559 chr8:56737562 . . 0 24 hm5C_associated_SNPs_90328 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:56737551-56737576
64251 chr1 181058643 181058643 1 + A C rs1361365 181058639 + 181058619 181058659 41 GCGCTGCCTGCTGCTGCGCGCCGCAACCAGCGGAGGACGAG GCGCTGCCTGCTGCTGCGCGCCGCCACCAGCGGAGGACGAG < 41bp 0.709444345232549 0.339235886071214 0.06426692 0.11535546 prediction 0.418888690465097 Functional Loss - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058639 chr1:181058643 nonsynonymous SNV 0.139 1 25 hm5C_associated_SNPs_90330 0 0 1 FXR2 POSTAR2 ENCODE chr1:181058596-181058659
64251 chr6 3085627 3085627 1 + C T BLCA 3085625 + 3085605 3085645 41 CTGGGAAGCGAATCCGGAAGCTCGGCCGACATTTCCTGGTA CTGGGAAGCGAATCCGGAAGCTTGGCCGACATTTCCTGGTA < 41bp 0.850643271158052 0.641207011144632 0.6132382 0.5220363 prediction 0.41887252002684 Functional Loss - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3085625 chr6:3085627 nonsynonymous SNV 0.311 5 23 hm5C_associated_SNPs_90338 0 0 2 PRPF8 POSTAR2 ENCODE chr6:3085591-3085677
64251 chr3 10916703 10916703 1 + G A SKCM 10916700 + 10916680 10916720 41 TGCTGCTGATCCTCCTGATACGAGGGGTCACGTTGCCCGGG TGCTGCTGATCCTCCTGATACGAAGGGTCACGTTGCCCGGG < 41bp 0.83017074371182 0.62073846596281 0.94715595 0.3134757 prediction 0.41886455549802 Functional Loss - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10916700 chr3:10916703 nonsynonymous SNV 0.974 4 24 hm5C_associated_SNPs_90340 0 0 1 RPS3 POSTAR2 ENCODE chr3:10916666-10916781
64251 chr16 1748922 1748922 1 + C T COAD 1748920 + 1748900 1748940 41 CACAGTCGACAGCCATGAGCCCCGGCTGGGGCCGCGGCCTC CACAGTCGACAGCCATGAGCCCTGGCTGGGGCCGCGGCCTC < 41bp 0.827641200227073 0.618211383672867 0.22582382 0.21444345 prediction 0.418859633108411 Functional Loss - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748920 chr16:1748922 nonsynonymous SNV 0.186 4 23 hm5C_associated_SNPs_90343 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:1748897-1748924
64251 chr2 65311422 65311422 1 + G C rs138604989 65311418 + 65311398 65311438 41 TTTCTTAGAAGAAAATGTGTCAGGGACTTGGGGATCTACAG TTTCTTAGAAGAAAATGTGTCAGGCACTTGGGGATCTACAG < 41bp 0.709423018637593 0.406358723836553 0.92665434 0.8112737 prediction 0.418846037275185 Functional Loss - CEP68 ENSG00000011523 UTR3 Human protein_coding chr2:65311418 chr2:65311422 . . 0 25 hm5C_associated_SNPs_90345 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:65311408-65311428
64251 chr8 8887427 8887427 1 + G T UCEC 8887425 + 8887405 8887445 41 GAATAGCAGTTCGAATGCTTCAGGATGGGTGTGAACTCCGA GAATAGCAGTTCGAATGCTTCATGATGGGTGTGAACTCCGA < 41bp 0.899310930422211 0.689890400581585 0.3602693 0.13675866 prediction 0.418841059681253 Functional Loss - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8887425 chr8:8887427 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_90348 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:8887327-8887461
64251 chr10 112724639 112724639 1 + G A CESC 112724636 + 112724616 112724656 41 ACTTGAAGAAGCTGCGGATGCTTGATTTACGGCATAATAAA ACTTGAAGAAGCTGCGGATGCTTAATTTACGGCATAATAAA < 41bp 0.709417649471245 0.487321227951697 0.1030474 0.10395464 prediction 0.418835298942489 Functional Loss - SHOC2 ENSG00000108061 CDS Human protein_coding chr10:112724636 chr10:112724639 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_90351 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr10:112724635-112724658
64251 chr19 9271087 9271087 1 + G T LUAD 9271083 + 9271063 9271103 41 AAGCCTTACGAGTGCAGCGACTGCGGGAAAGCCTTCAACGA AAGCCTTACGAGTGCAGCGACTGCTGGAAAGCCTTCAACGA < 41bp 0.713694370947549 0.504279062523614 0.31449342 0.08804953 prediction 0.418830616847871 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271083 chr19:9271087 nonsynonymous SNV 0.440 4 25 hm5C_associated_SNPs_90355 0 0 3 RBM15 POSTAR2 ENCODE chr19:9271074-9271118
64251 chr1 16770219 16770219 1 + G T UCEC 16770217 + 16770197 16770237 41 GCCTACATCAAGCTGGAGGACAGGACGTCAGGTAACCGGAA GCCTACATCAAGCTGGAGGACATGACGTCAGGTAACCGGAA < 41bp 0.916239951858626 0.706826395376145 0.07444736 0.062267423 prediction 0.418827112964961 Functional Loss - NECAP2 ENSG00000157191 CDS Human protein_coding chr1:16770217 chr1:16770219 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_90356 0 0 1 SRSF1 POSTAR2 ENCODE chr1:16770130-16770239
64251 chr16 20912175 20912175 1 + C T rs189768923 20912173 + 20912153 20912193 41 TCCCAGCCCGCCGCGGGCTGCGCGCTTCTGTGGGTGGGGGA TCCCAGCCCGCCGCGGGCTGCGTGCTTCTGTGGGTGGGGGA < 41bp 0.783378829232301 0.573972893222605 0.40352318 0.48842227 prediction 0.418811872019392 Functional Loss - LYRM1 ENSG00000102897 UTR5 Human protein_coding chr16:20912173 chr16:20912175 . . 0 23 hm5C_associated_SNPs_90362 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:20912130-20912200
64251 chr18 2656197 2656197 1 + G T LUAD 2656194 + 2656174 2656214 41 CGCGAAAAGGAGTCCGAGCTCGGGGACCGGCCTCTGCAGGT CGCGAAAAGGAGTCCGAGCTCGGTGACCGGCCTCTGCAGGT < 41bp 0.907134478597207 0.69773017652562 0.9282657 0.5778104 prediction 0.418808604143173 Functional Loss - SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2656194 chr18:2656197 synonymous SNV . 0 24 hm5C_associated_SNPs_90364 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:2656163-2656206
64251 chr8 128750945 128750945 1 + C T CESC 128750943 + 128750923 128750963 41 TCGGCCGCCGCCAAGCTCGTCTCAGAGAAGCTGGCCTCCTA TCGGCCGCCGCCAAGCTCGTCTTAGAGAAGCTGGCCTCCTA < 41bp 0.709402162182723 0.420945805136043 0.43801847 0.36598203 prediction 0.418804324365446 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128750943 chr8:128750945 nonsynonymous SNV 0.971 3 23 hm5C_associated_SNPs_90366 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:128750940-128750960
64251 chr5 76130339 76130339 1 + C T rs145017560 76130337 + 76130317 76130357 41 AGTTAACCAGGTGTGTGGTGCACGTTTGTAATCCCAGTTAC AGTTAACCAGGTGTGTGGTGCATGTTTGTAATCCCAGTTAC < 41bp 0.739677975460044 0.530282111519618 0.083658546 0.1256229 prediction 0.418791727880853 Functional Loss - F2RL1 ENSG00000164251 UTR3 Human protein_coding chr5:76130337 chr5:76130339 . . 0 23 hm5C_associated_SNPs_90373 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr5:76130320-76130340
64251 chr8 145537923 145537923 1 + C T UCEC 145537921 + 145537901 145537941 41 TTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTC TTCTCCGAAGGGGACGGCTTCGTCGAGGACCCCACCATCTC < 41bp 0.826501724602587 0.617110501427751 0.25603956 0.09066194 prediction 0.418782446349673 Functional Loss - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537921 chr8:145537923 nonsynonymous SNV 0.162 1 23 hm5C_associated_SNPs_90376 0 0 5 DDX55 POSTAR2 ENCODE chr8:145537869-145537924
64251 chr16 58542880 58542880 1 + C T SKCM 58542877 + 58542857 58542897 41 TGTCCTCAGGTGGAGTGCAACTCCAAACTGGACCCGACCAC TGTCCTCAGGTGGAGTGCAACTCTAAACTGGACCCGACCAC < 41bp 0.757922892872777 0.548538477415233 0.9635762 0.9371923 prediction 0.418768830915088 Functional Loss - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58542877 chr16:58542880 synonymous SNV . 0 24 hm5C_associated_SNPs_90378 0 0 1 DGCR8 POSTAR2 ENCODE chr16:58542863-58542899
64251 chr10 105203756 105203756 1 + C T UCEC 105203753 + 105203733 105203773 41 TCAAATACGGCGCCTTCCTTCTGCGGAGGAGCCAGGCTGCA TCAAATACGGCGCCTTCCTTCTGTGGAGGAGCCAGGCTGCA < 41bp 0.738539228752177 0.529155207812222 0.419398 0.50085014 prediction 0.41876804187991 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203753 chr10:105203756 nonsynonymous SNV 0.938 2 24 hm5C_associated_SNPs_90379 0 0 2 FMR1 POSTAR2 ENCODE chr10:105203752-105203795
64251 chr3 42229618 42229618 1 + G A BLCA 42229615 + 42229595 42229635 41 GCGCTGCGGAGGAGAGTGAGCCCGAGTCCGTTTGCTCAACC GCGCTGCGGAGGAGAGTGAGCCCAAGTCCGTTTGCTCAACC < 41bp 0.709383163198811 0.476285673468498 0.7409887 0.3812493 prediction 0.418766326397623 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42229615 chr3:42229618 nonsynonymous SNV 0.987 3 24 hm5C_associated_SNPs_90380 0 0 5 BUD13 POSTAR2 ENCODE chr3:42229523-42229658
64251 chr22 23523385 23523385 1 + G A HNSC 23523382 + 23523362 23523402 41 GGCAGCGATGGGGCTTCCGGCGCGCGGCGCAGGCCCCCGAC GGCAGCGATGGGGCTTCCGGCGCACGGCGCAGGCCCCCGAC < 41bp 0.709381327126432 0.453688789055546 0.8365057 0.5169887 prediction 0.418762654252865 Functional Loss - BCR ENSG00000186716 CDS Human protein_coding chr22:23523382 chr22:23523385 nonsynonymous SNV 0.248 0 24 hm5C_associated_SNPs_90382 0 0 7 DDX24 POSTAR2 ENCODE chr22:23523343-23523389
64251 chr1 3328268 3328268 1 + G T LIHC 3328264 + 3328244 3328284 41 CCGGGGAGCCTGCCCTTCTCCACGGCGCCTCCCACGTTCCC CCGGGGAGCCTGCCCTTCTCCACGTCGCCTCCCACGTTCCC < 41bp 0.750711926708344 0.541334827366966 0.7991183 0.37398627 prediction 0.418754198682754 Functional Loss - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3328264 chr1:3328268 nonsynonymous SNV 0.002 2 25 hm5C_associated_SNPs_90386 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:3328241-3328287
64251 chr17 6023963 6023963 1 + G A SKCM 6023960 + 6023940 6023980 41 CACAACTGGACGGGGCTGCCCAGGGAGTATGTGCCCAGATG CACAACTGGACGGGGCTGCCCAGAGAGTATGTGCCCAGATG < 41bp 0.808185816910335 0.598809554034638 0.90839887 0.78673077 prediction 0.418752525751395 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023960 chr17:6023963 synonymous SNV . 0 24 hm5C_associated_SNPs_90387 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:6023943-6023966
64251 chr6 151789912 151789912 1 + C T rs9397054 151789910 + 151789890 151789930 41 AAATGGGTAAATGGGTTTACCACAATCATATATTTTGGACT AAATGGGTAAATGGGTTTACCATAATCATATATTTTGGACT < 41bp 0.709376010528988 0.427313868768612 0.22651675 0.17772684 prediction 0.418752021057977 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151789910 chr6:151789912 synonymous SNV . 0 23 hm5C_associated_SNPs_90389 0 0 16 LIN28A POSTAR2 GSE39873,GSM980594 chr6:151789891-151789912
64251 chr1 163307845 163307845 1 + C T rs34426463 163307842 + 163307822 163307862 41 GACAAAATGCAACAGTTAAACGCCGCACACCAGGAGGCATT GACAAAATGCAACAGTTAAACGCTGCACACCAGGAGGCATT < 41bp 0.757412406514442 0.548036598502488 0.080640614 0.0623464 prediction 0.418751616023908 Functional Loss - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163307842 chr1:163307845 synonymous SNV . 0 24 hm5C_associated_SNPs_90390 0 0 1 GPKOW POSTAR2 ENCODE chr1:163307805-163307878
64251 chr11 57427134 57427134 1 + G A STAD 57427131 + 57427111 57427151 41 TTCACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCACTTG TTCACCTTTGATGCTGGTGCCAAAGTGGCTGTTTTCACTTG < 41bp 0.804871718185889 0.595498927218347 0.53636694 0.43530214 prediction 0.418745581935086 Functional Loss - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427131 chr11:57427134 synonymous SNV . 0 24 hm5C_associated_SNPs_90392 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:57427113-57427141
64251 chr1 3379830 3379830 1 + G A rs183210126 3379827 + 3379807 3379847 41 GGTCCCGGCACCCCCACAGCCTCGGCCCCCGGGGCACGAGG GGTCCCGGCACCCCCACAGCCTCAGCCCCCGGGGCACGAGG < 41bp 0.709372183253893 0.454540128881704 0.092309475 0.06438571 prediction 0.418744366507785 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3379827 chr1:3379830 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_90393 0 0 1 EIF3H POSTAR2 ENCODE chr1:3379786-3379857
64251 chr1 3379829 3379829 1 + C T COAD 3379827 + 3379807 3379847 41 GGTCCCGGCACCCCCACAGCCTCGGCCCCCGGGGCACGAGG GGTCCCGGCACCCCCACAGCCTTGGCCCCCGGGGCACGAGG < 41bp 0.709372183253893 0.452949250615278 0.092309475 0.10152274 prediction 0.418744366507785 Functional Loss - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3379827 chr1:3379829 nonsynonymous SNV 0.005 2 23 hm5C_associated_SNPs_90394 0 0 1 EIF3H POSTAR2 ENCODE chr1:3379786-3379857
64251 chr10 75529761 75529761 1 + G C GBM 75529757 + 75529737 75529777 41 GACCAATGTCTTCTTCTACCCTCGGCTCTTACCTTTGGTGC GACCAATGTCTTCTTCTACCCTCGCCTCTTACCTTTGGTGC < 41bp 0.709366201968536 0.423953544444882 0.12628949 0.20700261 prediction 0.418732403937073 Functional Loss - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529757 chr10:75529761 synonymous SNV . 0 25 hm5C_associated_SNPs_90402 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75529682-75529773
64251 chr16 2131603 2131603 1 + C T CESC 2131600 + 2131580 2131620 41 GCTGCCGCCTCCGCAGGGAACACCAGCTGGCTGATGAGCCT GCTGCCGCCTCCGCAGGGAACACTAGCTGGCTGATGAGCCT < 41bp 0.709365114989658 0.489103079124542 0.0970051 0.107690424 prediction 0.418730229979317 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2131600 chr16:2131603 synonymous SNV . 0 24 hm5C_associated_SNPs_90403 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:2131603-2131604
64251 chr17 79059488 79059488 1 + T C COAD 79059487 + 79059467 79059507 41 ACAACGAGCTGCTTACGCAGCTGGAGCAGAAGGTGGAGCTG ACAACGAGCTGCTTACGCAGCCGGAGCAGAAGGTGGAGCTG < 41bp 0.77193977346569 0.562576152569399 0.26817334 0.37123752 prediction 0.418727241792582 Functional Loss - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79059487 chr17:79059488 nonsynonymous SNV 0.930 4 22 hm5C_associated_SNPs_90406 0 0 2 BUD13 POSTAR2 ENCODE chr17:79059410-79059543
64251 chr10 115663332 115663332 1 + G A BLCA 115663329 + 115663309 115663349 41 AAAAAACTGTACAACATTAGCAGGAACTGGAGACACAAATA AAAAAACTGTACAACATTAGCAGAAACTGGAGACACAAATA < 41bp 0.726460084060391 0.517100933085284 0.6433002 0.39409277 prediction 0.418718301950215 Functional Loss - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115663329 chr10:115663332 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90410 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:115663299-115663335
64251 chr4 108852763 108852763 1 + G A rs112053024 108852760 + 108852740 108852780 41 AGCTGCGTGCGCGTCTCCTCCAGGCAGCAAGGGGAACCCGA AGCTGCGTGCGCGTCTCCTCCAGACAGCAAGGGGAACCCGA < 41bp 0.798550563296897 0.589192181948233 0.862073 0.43216446 prediction 0.418716762697329 Functional Loss - LOC101929595 ENSG00000245293 ncRNA_intronic Human antisense chr4:108852760 chr4:108852763 . . 0 24 hm5C_associated_SNPs_90411 1 0 1 DDX3X POSTAR2 ENCODE chr4:108852752-108852868
64251 chr18 33234650 33234650 1 + G A LUSC 33234647 + 33234627 33234667 41 ATGAGAAAATTTGCATACTGCAAGGTGGTCCTAGCCACCTC ATGAGAAAATTTGCATACTGCAAAGTGGTCCTAGCCACCTC < 41bp 0.761062409868361 0.551708619814457 0.5712174 0.31670615 prediction 0.418707580107808 Functional Loss - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33234647 chr18:33234650 synonymous SNV . 0 24 hm5C_associated_SNPs_90414 0 0 12 MOV10 POSTAR2 GSE37524,GSM921128 chr18:33234624-33234650
64251 chr19 1428991 1428991 1 + C T CESC 1428989 + 1428969 1429009 41 GTGGCAGCAAGGATATGGCCCGCAAGGTAAGGCTGATGCAG GTGGCAGCAAGGATATGGCCCGTAAGGTAAGGCTGATGCAG < 41bp 0.709353605351146 0.438297969481304 0.07025573 0.06688827 prediction 0.418707210702293 Functional Loss - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1428989 chr19:1428991 stopgain 0.905 1 23 hm5C_associated_SNPs_90415 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1428976-1429027
64251 chr7 94293603 94293603 1 + T C UCEC 94293602 + 94293582 94293622 41 GAGAAGGCTGGCCAGGGCTGCTGCAGCTCGCAAGCCACGCT GAGAAGGCTGGCCAGGGCTGCCGCAGCTCGCAAGCCACGCT < 41bp 0.806706855309485 0.597353988540146 0.48513222 0.39608195 prediction 0.418705733538678 Functional Loss - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293602 chr7:94293603 synonymous SNV . 0 22 hm5C_associated_SNPs_90416 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:94293580-94293605
64251 chr3 33907950 33907950 1 + C T STAD 33907948 + 33907928 33907968 41 AGTCCTGGACAGGCTCCATACCCGGGACCCCAGCAGCCTTC AGTCCTGGACAGGCTCCATACCTGGGACCCCAGCAGCCTTC < 41bp 0.839671492171785 0.630324888443378 0.32791072 0.09101054 prediction 0.418693207456815 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33907948 chr3:33907950 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_90420 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:33907940-33907960
64251 chr20 31607447 31607447 1 + C T SKCM 31607444 + 31607424 31607464 41 CAAGGTGCGGCTGGGTGCCACACCTGTGGCCATGCTCCACA CAAGGTGCGGCTGGGTGCCACACTTGTGGCCATGCTCCACA < 41bp 0.715260534410627 0.50591593230164 0.13280523 0.093526036 prediction 0.418689204217975 Functional Loss - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31607444 chr20:31607447 nonsynonymous SNV 0.421 4 24 hm5C_associated_SNPs_90423 0 0 2 RPS3 POSTAR2 ENCODE chr20:31607409-31607461
64251 chr3 128971792 128971792 1 + C T SKCM 128971790 + 128971770 128971810 41 GCAGAGGATGTCATCATTGTCACCAGCAGGCAAGTCATGGG GCAGAGGATGTCATCATTGTCATCAGCAGGCAAGTCATGGG < 41bp 0.860077792130398 0.650733289237604 0.14511451 0.12680694 prediction 0.418689005785588 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128971790 chr3:128971792 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_90424 0 0 1 DDX24 POSTAR2 ENCODE chr3:128971746-128971797
64251 chrX 19369504 19369504 1 + G A BLCA 19369501 + 19369481 19369521 41 TCACCCGGGGCCTTTCCGTCCGAGAAATTCTCGCAGAGCTT TCACCCGGGGCCTTTCCGTCCGAAAAATTCTCGCAGAGCTT < 41bp 0.821375319667497 0.612036186259759 0.8061827 0.24332085 prediction 0.418678266815476 Functional Loss - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19369501 chrX:19369504 nonsynonymous SNV 0.979 2 24 hm5C_associated_SNPs_90428 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:19369450-19369505
64251 chr9 139820948 139820948 1 + G A rs192922611 139820945 + 139820925 139820965 41 TGTGGGAGAGGGTCTGGTCCCACGCCGCCTCTGCTCAGACC TGTGGGAGAGGGTCTGGTCCCACACCGCCTCTGCTCAGACC < 41bp 0.743424834670435 0.534086910602433 0.01938963 0.012357861 prediction 0.418675848136003 Functional Loss - TRAF2 ENSG00000127191 UTR3 Human protein_coding chr9:139820945 chr9:139820948 . . 0 24 hm5C_associated_SNPs_90431 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139820941-139820968
64251 chr15 59064310 59064310 1 + G A OV 59064307 + 59064287 59064327 41 GGCCTCCAAGGAACGCTTCCCGGGACAATCTGTGTATCACA GGCCTCCAAGGAACGCTTCCCGGAACAATCTGTGTATCACA < 41bp 0.79490140667937 0.585564852213904 0.86242986 0.48912588 prediction 0.418673108930933 Functional Loss - MINDY2 ENSG00000128923 CDS Human protein_coding chr15:59064307 chr15:59064310 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_90432 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:59064281-59064317
64251 chr19 14581443 14581443 1 + G A SKCM 14581440 + 14581420 14581460 41 TTCGACAGCATCGTCAACGACGAGGTTCGCTACCCCCGCTT TTCGACAGCATCGTCAACGACGAAGTTCGCTACCCCCGCTT < 41bp 0.82952495866465 0.62018972169302 0.9106076 0.7709487 prediction 0.41867047394326 Functional Loss - PKN1 ENSG00000123143;ENSG00000123143 exonic;splicing Human other chr19:14581440 chr19:14581443 synonymous SNV . 0 24 hm5C_associated_SNPs_90433 0 0 2 EIF3H POSTAR2 ENCODE chr19:14581393-14581488
64251 chr6 44122563 44122563 1 + G T SARC 44122560 + 44122540 44122580 41 CTGATGCCACCCGACGCCCTCACGGACACAGACTTCCAGTC CTGATGCCACCCGACGCCCTCACTGACACAGACTTCCAGTC < 41bp 0.709334994029583 0.314217721320231 0.23493257 0.06293079 prediction 0.418669988059165 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122560 chr6:44122563 synonymous SNV . 0 24 hm5C_associated_SNPs_90434 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:44122542-44122569
64251 chr3 100057978 100057978 1 + G T UCEC 100057976 + 100057956 100057996 41 TCAGATTTCTTCCATCAAATCAGATAACGTCACTCGCGCTT TCAGATTTCTTCCATCAAATCATATAACGTCACTCGCGCTT < 41bp 0.709330427459047 0.358140000305129 0.40148816 0.102543384 prediction 0.418660854918094 Functional Loss - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100057976 chr3:100057978 nonsynonymous SNV 0.774 3 23 hm5C_associated_SNPs_90436 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917669 chr3:100057963-100057984
64251 chr16 30777754 30777754 1 + A T LUSC 30777750 + 30777730 30777770 41 GTGCGGGAGACGGGGGAGTACCGCATGCTGCAGGCCCAATT GTGCGGGAGACGGGGGAGTACCGCTTGCTGCAGGCCCAATT < 41bp 0.709327897313849 0.375095011851589 0.90784585 0.9069271 prediction 0.418655794627698 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30777750 chr16:30777754 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_90439 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:30777738-30777777
64251 chr11 70228237 70228237 1 + G A ACC 70228234 + 70228214 70228254 41 AGGTTGGATTCTGCTACAGTCAGGACTTACTCCTGCTAAAG AGGTTGGATTCTGCTACAGTCAGAACTTACTCCTGCTAAAG < 41bp 0.709326019477842 0.477679749224139 0.9181161 0.7656294 prediction 0.418652038955684 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70228234 chr11:70228237 synonymous SNV . 0 24 hm5C_associated_SNPs_90443 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr11:70228220-70228250
64251 chr5 180659692 180659692 1 + T C ESCA 180659691 + 180659671 180659711 41 TCAGAGCTGGCAGCGGTGGCCTCGGAGTTTGGGCGACTGAC TCAGAGCTGGCAGCGGTGGCCCCGGAGTTTGGGCGACTGAC < 41bp 0.772649785645594 0.563331738191379 0.77264136 0.5074928 prediction 0.41863609490843 Functional Loss - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180659691 chr5:180659692 nonsynonymous SNV 0.914 3 22 hm5C_associated_SNPs_90447 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:180659655-180659693
64251 chrX 37587071 37587071 1 + T C COAD 37587070 + 37587050 37587090 41 GTAGTCCTGGTCCTCTTTACCTCCGTCCTGAAGACCTGGGT GTAGTCCTGGTCCTCTTTACCCCCGTCCTGAAGACCTGGGT < 41bp 0.709314650986953 0.452226095994532 0.117906004 0.08028543 prediction 0.418629301973906 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37587070 chrX:37587071 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_90449 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chrX:37587047-37587076
64251 chr13 88329984 88329984 1 + G A UCEC 88329981 + 88329961 88330001 41 TAGAGGATTACAAAGACCTGCACGAGCTCAAGGTCACCTAC TAGAGGATTACAAAGACCTGCACAAGCTCAAGGTCACCTAC < 41bp 0.808445058784665 0.599134956895289 0.27143127 0.17648414 prediction 0.418620203778753 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329981 chr13:88329984 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90453 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88329960-88330000
64251 chr3 40570877 40570877 1 + C T UCEC 40570874 + 40570854 40570894 41 TCAATGGGCCAGCCTCGACCCTGCGCAGAGGGCCCTGTACG TCAATGGGCCAGCCTCGACCCTGTGCAGAGGGCCCTGTACG < 41bp 0.709307427485163 0.496791650130013 0.08076128 0.08692157 prediction 0.418614854970326 Functional Loss - ZNF621 ENSG00000172888 CDS Human protein_coding chr3:40570874 chr3:40570877 nonsynonymous SNV 0.643 0 24 hm5C_associated_SNPs_90456 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:40570853-40570902
64251 chr10 75550824 75550824 1 + G A CESC 75550821 + 75550801 75550841 41 GCCCTCTGAGGGGCCGTGAGCCAGAGGGCGTCTGGAACCTG GCCCTCTGAGGGGCCGTGAGCCAAAGGGCGTCTGGAACCTG < 41bp 0.806865313917881 0.597561886092563 0.7138973 0.43116236 prediction 0.418606855650637 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75550821 chr10:75550824 nonsynonymous SNV 0.839 3 24 hm5C_associated_SNPs_90458 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:75550801-75550824
64251 chr13 114286059 114286059 1 + G T LUAD 114286057 + 114286037 114286077 41 GACTCCTCACCTTGGTCTGCCGGGTGAGCACTTCCCTCTGG GACTCCTCACCTTGGTCTGCCGTGTGAGCACTTCCCTCTGG < 41bp 0.709302993376178 0.352495064329634 0.9230224 0.37072796 prediction 0.418605986752357 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114286057 chr13:114286059 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_90459 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:114286025-114286061
64251 chr6 100062692 100062692 1 + C T rs141407407 100062690 + 100062670 100062710 41 AGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG AGAGGAGTCGAGGGTTTATTCTTGCAGTAGAGGAACTCCTG < 41bp 0.753566367621193 0.544269757107695 0.7703567 0.17801994 prediction 0.418593221026996 Functional Loss - PRDM13 ENSG00000112238 UTR3 Human protein_coding chr6:100062690 chr6:100062692 . . 0 23 hm5C_associated_SNPs_90465 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704216 chr6:100062680-100062700
64251 chr17 48918236 48918236 1 + C T SKCM 48918233 + 48918213 48918253 41 GTGAGCGAGATGCCGCTCATCATCATGGGGGAGGTGGACGG GTGAGCGAGATGCCGCTCATCATTATGGGGGAGGTGGACGG < 41bp 0.742522155500352 0.5332307478832 0.32908958 0.10521203 prediction 0.418582815234303 Functional Loss - WFIKKN2 ENSG00000173714 CDS Human protein_coding chr17:48918233 chr17:48918236 synonymous SNV . 0 24 hm5C_associated_SNPs_90468 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:48918224-48918248
64251 chr1 179033190 179033190 1 + C T UCEC 179033187 + 179033167 179033207 41 ATGTGTGGCCTCTGCAGAAGCACCGTCACCCATGGGGCAGG ATGTGTGGCCTCTGCAGAAGCACTGTCACCCATGGGGCAGG < 41bp 0.768023724417849 0.558733272605577 0.08356595 0.090321034 prediction 0.418580903624542 Functional Loss - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179033187 chr1:179033190 nonsynonymous SNV 0.979 5 24 hm5C_associated_SNPs_90469 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:179033166-179033202
64251 chr15 85147415 85147415 1 + G T LUSC 85147411 + 85147391 85147431 41 GCCGCCTCCGAGAGCTCTGCCGGCGCTGGCTGAGACCAGAG GCCGCCTCCGAGAGCTCTGCCGGCTCTGGCTGAGACCAGAG < 41bp 0.709287637519147 0.49549279091818 0.92578626 0.9053804 prediction 0.418575275038293 Functional Loss - ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85147411 chr15:85147415 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_90470 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:85147402-85147430
64251 chr11 111808245 111808245 1 + G T UCEC 111808242 + 111808222 111808262 41 CAATGCTAGCCTGCCTGACCCGAGGGAACTTACTGGACGTC CAATGCTAGCCTGCCTGACCCGATGGAACTTACTGGACGTC < 41bp 0.709280558428068 0.316155653078151 0.9006264 0.23673245 prediction 0.418561116856135 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111808242 chr11:111808245 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_90474 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:111808224-111808279
64251 chr9 139802569 139802569 1 + G T LUSC 139802565 + 139802545 139802585 41 GCTCATGCTGACCGAATGTCCCGCGTGCAAAGGCCTGGTCC GCTCATGCTGACCGAATGTCCCGCTTGCAAAGGCCTGGTCC < 41bp 0.737507139262489 0.528230271865511 0.20434523 0.024742812 prediction 0.418553734793958 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139802565 chr9:139802569 synonymous SNV . 0 25 hm5C_associated_SNPs_90478 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:139802567-139802595
64251 chr19 30101339 30101339 1 + G A rs11556817 30101336 + 30101316 30101356 41 CCTTCAGGAGCACAGCGGGCCGAGGCCTTCGTGAGGGCCTT CCTTCAGGAGCACAGCGGGCCGAAGCCTTCGTGAGGGCCTT < 41bp 0.809377384952514 0.60010309812055 0.6910347 0.37886235 prediction 0.418548573663929 Functional Loss - POP4 ENSG00000105171 CDS Human protein_coding chr19:30101336 chr19:30101339 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_90479 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:30101320-30101340
64251 chr11 117152837 117152837 1 + C T UCEC 117152835 + 117152815 117152855 41 TGGGTTCCCTTGTCAGCCCCCACGGTCCACACATGCCCCCT TGGGTTCCCTTGTCAGCCCCCATGGTCCACACATGCCCCCT < 41bp 0.85856029491052 0.649286848610686 0.1882275 0.24177843 prediction 0.418546892599667 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152835 chr11:117152837 synonymous SNV . 0 23 hm5C_associated_SNPs_90480 0 0 8 DDX59 POSTAR2 ENCODE chr11:117152807-117152873
64251 chr7 150020625 150020625 1 + G T rs534922901 150020621 + 150020601 150020641 41 CTTCCCAGCTTGGCCAGTGGCTCCGCAGGCTGCCGGCTCCA CTTCCCAGCTTGGCCAGTGGCTCCTCAGGCTGCCGGCTCCA < 41bp 0.72183214271387 0.512564667992255 0.20334089 0.16526109 prediction 0.41853494944323 Functional Loss - ACTR3C;LRRC61 ENSG00000106526 CDS Human protein_coding chr7:150020621 chr7:150020625 nonsynonymous SNV 0.073 2 25 hm5C_associated_SNPs_90484 0 0 11 BUD13 POSTAR2 ENCODE chr7:150020598-150020739
64251 chr19 14675889 14675889 1 + C T rs59273619 14675887 + 14675867 14675907 41 TTCTCTGACAGATCTGCCAGCTCGGCAACTTCTCCATCCAC TTCTCTGACAGATCTGCCAGCTTGGCAACTTCTCCATCCAC < 41bp 0.709264984869856 0.447199529351182 0.21853292 0.16888395 prediction 0.418529969739713 Functional Loss - TECR ENSG00000099797 CDS Human protein_coding chr19:14675887 chr19:14675889 synonymous SNV . 0 23 hm5C_associated_SNPs_90487 1 0 9 EFTUD2 POSTAR2 ENCODE chr19:14675836-14675892
64251 chr7 30673401 30673401 1 + A C rs4593 30673400 + 30673380 30673420 41 CCTAGCCAATGGCAACATCACATGGGCTGATGTGGAGGCCA CCTAGCCAATGGCAACATCACCTGGGCTGATGTGGAGGCCA < 41bp 0.709264094858573 0.445427575299951 0.455 0.3165145 prediction 0.418528189717145 Functional Loss - GARS ENSG00000106105 CDS Human protein_coding chr7:30673400 chr7:30673401 synonymous SNV . 0 22 hm5C_associated_SNPs_90488 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:30673389-30673417
64251 chr7 561415 561415 1 + G A rs561329547 561412 + 561392 561432 41 CCCTGCCCGGCCTGGAGCTACGGGTGCGCCCAGCTAGAGTT CCCTGCCCGGCCTGGAGCTACGGATGCGCCCAGCTAGAGTT < 41bp 0.7092640676535 0.465730774614837 0.7523061 0.5685457 prediction 0.418528135307 Functional Loss - HRAT92 ENSG00000223855 ncRNA_exonic Human lincRNA chr7:561412 chr7:561415 . . 0 24 hm5C_associated_SNPs_90489 0 0 2 DROSHA POSTAR2 ENCODE chr7:561335-561420
64251 chr19 6535039 6535039 1 + G A COAD 6535036 + 6535016 6535056 41 TGGGACTCTTCCGGGTGACCCCCGAAATCCCAGCCGGACTC TGGGACTCTTCCGGGTGACCCCCAAAATCCCAGCCGGACTC < 41bp 0.82666692235354 0.61740341804999 0.64300954 0.2840763 prediction 0.4185270086071 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6535036 chr19:6535039 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_90491 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:6535039-6535064
64251 chr17 43912050 43912050 1 + C T STAD 43912048 + 43912028 43912068 41 GGACAAGCACTCGATCCGTGCCCGAGTGGCCCGTGCCATGT GGACAAGCACTCGATCCGTGCCTGAGTGGCCCGTGCCATGT < 41bp 0.735745629015211 0.526482238733888 0.10095772 0.065099 prediction 0.418526780562646 Functional Loss - CRHR1;LINC02210-CRHR1 ENSG00000120088 CDS Human protein_coding chr17:43912048 chr17:43912050 stopgain 0.275 1 23 hm5C_associated_SNPs_90492 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43912032-43912059
64251 chr9 137007540 137007540 1 + G A KIRC 137007537 + 137007517 137007557 41 CCAGTCCAACCTTATTGTCTCAGGATCCGTAAGTGTGGCTG CCAGTCCAACCTTATTGTCTCAGAATCCGTAAGTGTGGCTG < 41bp 0.819539598135493 0.61027743272905 0.90767574 0.77826744 prediction 0.418524330812886 Functional Loss - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137007537 chr9:137007540 nonsynonymous SNV 0.733 4 24 hm5C_associated_SNPs_90494 0 0 1 DDX24 POSTAR2 ENCODE chr9:137007483-137007545
64251 chr16 85839388 85839388 1 + G A UCEC 85839385 + 85839365 85839405 41 TTTGCTGAGATGAACAGGGGCTCGAACGAGTGGAAGACGGT TTTGCTGAGATGAACAGGGGCTCAAACGAGTGGAAGACGGT < 41bp 0.796880584352425 0.587622556298538 0.39128923 0.35279912 prediction 0.418516056107775 Functional Loss - COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85839385 chr16:85839388 synonymous SNV . 0 24 hm5C_associated_SNPs_90498 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:85839313-85839401
64251 chr17 40996907 40996907 1 + G A rs139067325 40996904 + 40996884 40996924 41 GACGCAGCCCAGGCTCAGCCCTCGGACAACTGCATCTTCTC GACGCAGCCCAGGCTCAGCCCTCAGACAACTGCATCTTCTC < 41bp 0.819493660592951 0.610249965884743 0.05875331 0.1062198 prediction 0.418487389416416 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40996904 chr17:40996907 synonymous SNV . 0 24 hm5C_associated_SNPs_90506 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40996887-40996925
64251 chr11 117038270 117038270 1 + C T SKCM 117038268 + 117038248 117038288 41 ACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTCCTG ACCGACGGGGGTTTTGTGCACTTGGACGGTGCCATCTCCTG < 41bp 0.849356240094682 0.640121417648585 0.20543316 0.15864196 prediction 0.418469644892194 Functional Loss - PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117038268 chr11:117038270 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_90509 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:117038227-117038271
64251 chr12 64815126 64815126 1 + C T SKCM 64815124 + 64815104 64815144 41 GAATGGGGATATTAAGAATGCTCAAGAGGCACTACAAGCTA GAATGGGGATATTAAGAATGCTTAAGAGGCACTACAAGCTA < 41bp 0.709233168304406 0.411988752981984 0.061017483 0.053048432 prediction 0.418466336608812 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64815124 chr12:64815126 stopgain 0.994 0 23 hm5C_associated_SNPs_90511 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:64815023-64815139
64251 chr9 139814815 139814815 1 + C T COAD 139814812 + 139814792 139814832 41 GCCACGCGGGGTCAGAGCTCCTGCAGAGGTGCGAGAGCCTG GCCACGCGGGGTCAGAGCTCCTGTAGAGGTGCGAGAGCCTG < 41bp 0.774797656338789 0.565566043926792 0.57015 0.33991548 prediction 0.418463224823994 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139814812 chr9:139814815 stopgain 0.100 0 24 hm5C_associated_SNPs_90512 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139814792-139814817
64251 chr12 7048007 7048007 1 + C T BRCA 7048004 + 7047984 7048024 41 AGCCTAGTGAGCTGGAACCCCTACATGGGGTCCCTGGGCCG AGCCTAGTGAGCTGGAACCCCTATATGGGGTCCCTGGGCCG < 41bp 0.774167499249499 0.564937358098529 0.92647535 0.88618827 prediction 0.418460282301941 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7048004 chr12:7048007 nonsynonymous SNV 0.763 3 24 hm5C_associated_SNPs_90514 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:7047983-7048028
64251 chr2 204154538 204154538 1 + C T SKCM 204154535 + 204154515 204154555 41 TGTTCGAACTGCCAAACTGACTCCAGTTTCTGCCCAGCTTC TGTTCGAACTGCCAAACTGACTCTAGTTTCTGCCCAGCTTC < 41bp 0.709229856512453 0.480707716920392 0.60274523 0.116871595 prediction 0.418459713024906 Functional Loss - CYP20A1 ENSG00000119004 CDS Human protein_coding chr2:204154535 chr2:204154538 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_90518 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:204154528-204154551
64251 chr7 116340296 116340296 1 + C T BLCA 116340294 + 116340274 116340314 41 ACAAAAACAATGTGAGATGTCTCCAGCATTTTTACGGACCC ACAAAAACAATGTGAGATGTCTTCAGCATTTTTACGGACCC < 41bp 0.709225732316768 0.432216374985716 0.9385221 0.06466487 prediction 0.418451464633536 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116340294 chr7:116340296 synonymous SNV . 0 23 hm5C_associated_SNPs_90522 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116340220-116340299
64251 chr8 143816795 143816795 1 + G C HNSC 143816794 + 143816774 143816814 41 CAGCACTGGATCTCCTACAACGAGGCCAGCAGCCAGCTGCT CAGCACTGGATCTCCTACAACCAGGCCAGCAGCCAGCTGCT < 41bp 0.709220598109976 0.392115374405941 0.9098458 0.5524615 prediction 0.418441196219953 Functional Loss - THEM6 ENSG00000130193 CDS Human protein_coding chr8:143816794 chr8:143816795 nonsynonymous SNV 0.762 1 22 hm5C_associated_SNPs_90523 0 0 3 RPS3 POSTAR2 ENCODE chr8:143816750-143816797
64251 chr1 6649214 6649214 1 + G A STAD 6649211 + 6649191 6649231 41 AGAGGAGAGCTTCACCGGCCCAGGTGTCCTGGAGCCCTCCC AGAGGAGAGCTTCACCGGCCCAGATGTCCTGGAGCCCTCCC < 41bp 0.812305275450508 0.603084984852669 0.37657875 0.07139224 prediction 0.418440581195679 Functional Loss - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6649211 chr1:6649214 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_90524 0 0 1 FMR1 POSTAR2 ENCODE chr1:6649107-6649222
64251 chr19 17632037 17632037 1 + G A rs113801377 17632034 + 17632014 17632054 41 GCCTCCGGCCAGCAGCCCTACCCGGGGCTCAACACACAGGC GCCTCCGGCCAGCAGCCCTACCCAGGGCTCAACACACAGGC < 41bp 0.709214965545169 0.485781561484301 0.25316793 0.07728729 prediction 0.418429931090338 Functional Loss - PGLS ENSG00000130313 UTR3 Human protein_coding chr19:17632034 chr19:17632037 . . 0 24 hm5C_associated_SNPs_90528 0 0 2 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr19:17632025-17632064
64251 chr2 46986948 46986948 1 + C T LGG 46986945 + 46986925 46986965 41 TCCGCCGCTACAACAGATCCCTGCATGCCCGAATTGAGCAG TCCGCCGCTACAACAGATCCCTGTATGCCCGAATTGAGCAG < 41bp 0.772479149881514 0.563265313358148 0.027908921 0.010845751 prediction 0.418427673046732 Functional Loss - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46986945 chr2:46986948 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_90530 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:46986922-46986955
64251 chr11 114168792 114168792 1 + C T STAD 114168789 + 114168769 114168809 41 CTGACTACTCAGACCAGAACCTGCAGGAGCTGGAGAAGTGG CTGACTACTCAGACCAGAACCTGTAGGAGCTGGAGAAGTGG < 41bp 0.795149924154906 0.585937251678243 0.15443775 0.1562765 prediction 0.418425344953326 Functional Loss - NNMT ENSG00000166741 CDS Human protein_coding chr11:114168789 chr11:114168792 stopgain 0.991 0 24 hm5C_associated_SNPs_90532 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:114168780-114168800
64251 chr1 110883881 110883881 1 + G T UCEC 110883879 + 110883859 110883899 41 TGGATAGCCTAGATCGCAGGCGGGATGGTTGGTCCTTGGAC TGGATAGCCTAGATCGCAGGCGTGATGGTTGGTCCTTGGAC < 41bp 0.909467945414456 0.700259337465948 0.91648793 0.304176 prediction 0.418417215897018 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883879 chr1:110883881 synonymous SNV . 0 23 hm5C_associated_SNPs_90536 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:110883849-110883912
64251 chr12 4430444 4430444 1 + C T SKCM 4430442 + 4430422 4430462 41 ACGCGGCTCCGGGAACATGGCTCGCTTCGCTCTGACTGTTG ACGCGGCTCCGGGAACATGGCTTGCTTCGCTCTGACTGTTG < 41bp 0.709202837589774 0.472119609443055 0.041567296 0.03266108 prediction 0.418405675179547 Functional Loss - TIGAR ENSG00000078237 CDS Human protein_coding chr12:4430442 chr12:4430444 nonsynonymous SNV 0.851 3 23 hm5C_associated_SNPs_90541 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:4430437-4430468
64251 chr11 47603664 47603664 1 + C T UCEC 47603661 + 47603641 47603681 41 TTGTCTACAACCTGTTGTCTCTGCGCTTCAACTCACGGATC TTGTCTACAACCTGTTGTCTCTGTGCTTCAACTCACGGATC < 41bp 0.749866051764266 0.540663667012117 0.17888889 0.054540515 prediction 0.418404769504298 Functional Loss - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47603661 chr11:47603664 nonsynonymous SNV 0.986 5 24 hm5C_associated_SNPs_90542 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:47603635-47603669
64251 chr12 56618713 56618713 1 + G A SARC 56618710 + 56618690 56618730 41 TGAACCTTATCTTCATTGTGCTGGAGACAGGTGTCTATACT TGAACCTTATCTTCATTGTGCTGAAGACAGGTGTCTATACT < 41bp 0.803202347043912 0.594003537460126 0.20648605 0.08383775 prediction 0.418397619167571 Functional Loss - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56618710 chr12:56618713 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_90546 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:56618684-56618718
64251 chr12 8926041 8926041 1 + C T UCEC 8926038 + 8926018 8926058 41 ATGAAAGATGACGGCTCCTTCTGCGTCTGTGAGGCCAATGC ATGAAAGATGACGGCTCCTTCTGTGTCTGTGAGGCCAATGC < 41bp 0.770556015399096 0.56136121230203 0.13900268 0.09834498 prediction 0.418389606194132 Functional Loss - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926038 chr12:8926041 synonymous SNV . 0 24 hm5C_associated_SNPs_90549 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:8925975-8926063
64251 chr19 2809934 2809934 1 + G A rs112446715 2809931 + 2809911 2809951 41 TAGGGAAGGTTCCACACACACACGAGCAGGGAGATGCAGCA TAGGGAAGGTTCCACACACACACAAGCAGGGAGATGCAGCA < 41bp 0.791944165231496 0.582759421999142 0.14105007 0.058219403 prediction 0.418369486464708 Functional Loss - THOP1 ENSG00000172009 UTR5 Human protein_coding chr19:2809931 chr19:2809934 . . 0 24 hm5C_associated_SNPs_90552 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:2809900-2809960
64251 chr15 90142648 90142648 1 + G A UCEC 90142645 + 90142625 90142665 41 AATCATGTTGTATGCATGTGCTCGAAACATGATCTCAACCG AATCATGTTGTATGCATGTGCTCAAAACATGATCTCAACCG < 41bp 0.709178116633175 0.469715674020524 0.163382 0.04658428 prediction 0.418356233266349 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90142645 chr15:90142648 nonsynonymous SNV 0.177 0 24 hm5C_associated_SNPs_90555 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90142609-90142656
64251 chrX 47747452 47747452 1 + C T UCEC 47747449 + 47747429 47747469 41 ACTTCAGTAGAGAGGAGTGGCAGCAACTGGACTCTACTCAA ACTTCAGTAGAGAGGAGTGGCAGTAACTGGACTCTACTCAA < 41bp 0.709176866191315 0.498949352219607 0.3859083 0.4604838 prediction 0.41835373238263 Functional Loss - ZNF81 ENSG00000197779 CDS Human protein_coding chrX:47747449 chrX:47747452 stopgain 0.202 0 24 hm5C_associated_SNPs_90556 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:47747418-47747452
64251 chr16 89180853 89180853 1 + A T rs560149696 89180849 + 89180829 89180869 41 CGGTATGGCATGACCGAGATCGGCATGGCTCTGTCCGGGCC CGGTATGGCATGACCGAGATCGGCTTGGCTCTGTCCGGGCC < 41bp 0.904140473073798 0.694975153144051 0.33483174 0.06116894 prediction 0.418330639859493 Functional Loss - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89180849 chr16:89180853 nonsynonymous SNV 0.973 4 25 hm5C_associated_SNPs_90563 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:89180842-89180861
64251 chr1 44303964 44303964 1 + A C UCEC 44303960 + 44303940 44303980 41 AAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCC AAGCCTGGCTATGCTTCAGCCTTGCTGACGGCCATCTTCCC < 41bp 0.709163206273983 0.342442430012116 0.20024195 0.19497842 prediction 0.418326412547967 Functional Loss - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44303960 chr1:44303964 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_90570 0 0 1 PPIG POSTAR2 ENCODE chr1:44303915-44303985
64251 chr20 334124 334124 1 + G A BLCA 334121 + 334101 334141 41 CCAAGGCAGAGCCCTTGGACCCCGAAGCCGACAGCCACGTG CCAAGGCAGAGCCCTTGGACCCCAAAGCCGACAGCCACGTG < 41bp 0.709160919630996 0.461468396482481 0.30339313 0.21983421 prediction 0.418321839261993 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334121 chr20:334124 nonsynonymous SNV 0.026 0 24 hm5C_associated_SNPs_90574 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:334090-334124
64251 chr20 334123 334123 1 + C T LUSC 334121 + 334101 334141 41 CCAAGGCAGAGCCCTTGGACCCCGAAGCCGACAGCCACGTG CCAAGGCAGAGCCCTTGGACCCTGAAGCCGACAGCCACGTG < 41bp 0.709160919630996 0.449874178993801 0.30339313 0.18651688 prediction 0.418321839261993 Functional Loss - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334121 chr20:334123 synonymous SNV . 0 23 hm5C_associated_SNPs_90575 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:334090-334124
64251 chr17 4443097 4443097 1 - G A UCEC 4443100 - 4443080 4443120 41 GAGGATGGCACACCTGCAGCCACCGGCGGGAGCCAGCCCCC GAGGATGGCACACCTGCAGCCACTGGCGGGAGCCAGCCCCC < 41bp 0.709160109896234 0.498856962005688 0.82113826 0.23156694 prediction 0.418320219792468 Functional Loss - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4443100 chr17:4443097 synonymous SNV . 0 24 hm5C_associated_SNPs_90577 0 0 6 BUD13 POSTAR2 ENCODE chr17:4443079-4443174
64251 chr3 111603514 111603514 1 + G A LUAD 111603511 + 111603491 111603531 41 CCCGCCTCCTATCAGCAGATCGGGAGCCGCAAGCATGCCTT CCCGCCTCCTATCAGCAGATCGGAAGCCGCAAGCATGCCTT < 41bp 0.809684664275294 0.600530713470301 0.910898 0.73057073 prediction 0.418307901609988 Functional Loss - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111603511 chr3:111603514 nonsynonymous SNV 0.018 3 24 hm5C_associated_SNPs_90582 0 0 1 EIF3H POSTAR2 ENCODE chr3:111603445-111603532
64251 chr9 129266004 129266004 1 + G A rs191235008 129266001 + 129265981 129266021 41 CAGCTTTGCCTAGGACTCTCCAGGGTCGCTGATCCTCCCCG CAGCTTTGCCTAGGACTCTCCAGAGTCGCTGATCCTCCCCG < 41bp 0.709150308580846 0.463401963778931 0.9239105 0.91774726 prediction 0.418300617161693 Functional Loss - MVB12B ENSG00000196814 UTR3 Human protein_coding chr9:129266001 chr9:129266004 . . 0 24 hm5C_associated_SNPs_90584 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:129265976-129266033
64251 chr12 125509815 125509815 1 + G C UCEC 125509814 + 125509794 125509834 41 GTGGCCGTCTACTTCATGACCGGGCCCATGGGCTTCTACTG GTGGCCGTCTACTTCATGACCCGGCCCATGGGCTTCTACTG < 41bp 0.709149443489404 0.393081866988703 0.86191607 0.24151546 prediction 0.418298886978809 Functional Loss - BRI3BP ENSG00000184992 CDS Human protein_coding chr12:125509814 chr12:125509815 nonsynonymous SNV 0.951 4 22 hm5C_associated_SNPs_90586 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr12:125509781-125509838
64251 chr7 42971992 42971992 1 + C T ACC 42971990 + 42971970 42972010 41 TCTTCCAGCAGGGAAAATGGCGCTGGCCATGCTGGTCTTGG TCTTCCAGCAGGGAAAATGGCGTTGGCCATGCTGGTCTTGG < 41bp 0.773369378894747 0.564227417422485 0.43759897 0.54831874 prediction 0.418283922944525 Functional Loss - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42971990 chr7:42971992 synonymous SNV . 0 23 hm5C_associated_SNPs_90589 0 0 1 DDX3X POSTAR2 ENCODE chr7:42971992-42972070
64251 chr20 61919348 61919348 1 + G A rs79931129 61919345 + 61919325 61919365 41 CTGCAGTGTGAGGACAGCGTCTCGGGAGGCAGGACCCTAGG CTGCAGTGTGAGGACAGCGTCTCAGGAGGCAGGACCCTAGG < 41bp 0.807182121163263 0.598040791500162 0.37335366 0.05628392 prediction 0.418282659326203 Functional Loss - ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61919345 chr20:61919348 . . 0 24 hm5C_associated_SNPs_90590 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:61919292-61919354
64251 chr4 42400102 42400102 1 + T C STAD 42400101 + 42400081 42400121 41 CACTGCTGGCGCTTTGCCTTCTCCTTGGCTGGCTGCGCTGG CACTGCTGGCGCTTTGCCTTCCCCTTGGCTGGCTGCGCTGG < 41bp 0.794992036957483 0.58585191551065 0.31785107 0.30721897 prediction 0.418280242893666 Functional Loss - SHISA3 ENSG00000178343 CDS Human protein_coding chr4:42400101 chr4:42400102 nonsynonymous SNV 0.240 3 22 hm5C_associated_SNPs_90593 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr4:42400096-42400120
64251 chr2 1320117 1320117 1 + G T CESC 1320115 + 1320095 1320135 41 CTCGAGTAAAGCTGCTGTTTCAGAATCTGGACACCAAACAG CTCGAGTAAAGCTGCTGTTTCATAATCTGGACACCAAACAG < 41bp 0.709133371591462 0.378717017586184 0.5010816 0.15171486 prediction 0.418266743182925 Functional Loss - SNTG2 ENSG00000172554 CDS Human protein_coding chr2:1320115 chr2:1320117 nonsynonymous SNV 0.464 4 23 hm5C_associated_SNPs_90599 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr2:1320094-1320117
64251 chr7 44247738 44247738 1 + C T UCEC 44247736 + 44247716 44247756 41 TTTCACTCTTTCCTAGAACCCACGAGAAGCTGATCCCATGA TTTCACTCTTTCCTAGAACCCATGAGAAGCTGATCCCATGA < 41bp 0.872293514468072 0.66316076105937 0.027794719 0.009011388 prediction 0.418265506817404 Functional Loss - YKT6 ENSG00000106636 CDS Human protein_coding chr7:44247736 chr7:44247738 stopgain 0.997 1 23 hm5C_associated_SNPs_90600 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:44247729-44247771
64251 chr11 9406234 9406234 1 + G A rs188545367 9406231 + 9406211 9406251 41 GTTGCCGCTGCGGAGCGCGGCGGGTCCATGTGCGCAGTGAG GTTGCCGCTGCGGAGCGCGGCGGATCCATGTGCGCAGTGAG < 41bp 0.71247721703085 0.503348307823284 0.6043372 0.43732557 prediction 0.418257818415133 Functional Loss - IPO7 ENSG00000205339 UTR5 Human protein_coding chr11:9406231 chr11:9406234 . . 0 24 hm5C_associated_SNPs_90605 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr11:9406225-9406247
64251 chr11 61897893 61897893 1 + G A DLBC 61897890 + 61897870 61897910 41 TCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCG TCCACGCCCACGGGCTCTCGCACAGACTCTCAATCGGTGCG < 41bp 0.70912875184732 0.445694209432564 0.68507653 0.18511641 prediction 0.41825750369464 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897890 chr11:61897893 synonymous SNV . 0 24 hm5C_associated_SNPs_90606 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:61897861-61897904
64251 chr11 61897892 61897892 1 + C T KIRC 61897890 + 61897870 61897910 41 TCCACGCCCACGGGCTCTCGCACGGACTCTCAATCGGTGCG TCCACGCCCACGGGCTCTCGCATGGACTCTCAATCGGTGCG < 41bp 0.70912875184732 0.45545926772892 0.68507653 0.9165954 prediction 0.41825750369464 Functional Loss - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897890 chr11:61897892 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_90607 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:61897861-61897904
64251 chr11 64953792 64953792 1 + C T UCEC 64953789 + 64953769 64953809 41 AGGCGCTGGAGCGGGGCTCCCTGCTGGGCTGCTCCATAGAC AGGCGCTGGAGCGGGGCTCCCTGTTGGGCTGCTCCATAGAC < 41bp 0.731533298131321 0.52241440139821 0.11231285 0.0649246 prediction 0.418237793466223 Functional Loss - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64953789 chr11:64953792 synonymous SNV . 0 24 hm5C_associated_SNPs_90611 0 0 6 FMR1 POSTAR2 ENCODE chr11:64953765-64953805
64251 chr3 183910650 183910650 1 + C T SKCM 183910647 + 183910627 183910667 41 GTGGAGCAGCTGGACCTAAACGTCAGTGCTGTGGAACTGCT GTGGAGCAGCTGGACCTAAACGTTAGTGCTGTGGAACTGCT < 41bp 0.758545959685281 0.549427971544854 0.15196282 0.2832243 prediction 0.418235976280855 Functional Loss - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183910647 chr3:183910650 synonymous SNV . 0 24 hm5C_associated_SNPs_90612 0 0 2 PPIG POSTAR2 ENCODE chr3:183910643-183910684
64251 chr3 119529005 119529005 1 + C T SKCM 119529002 + 119528982 119529022 41 GGCGACAGTGCCAGGCCTGCCGCCTGCGCAAGTGCCTGGAG GGCGACAGTGCCAGGCCTGCCGCTTGCGCAAGTGCCTGGAG < 41bp 0.709117301367003 0.493280051084566 0.49287948 0.40112534 prediction 0.418234602734005 Functional Loss - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119529002 chr3:119529005 synonymous SNV . 0 24 hm5C_associated_SNPs_90614 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119528910-119529022
64251 chr12 27485841 27485841 1 + G A rs7301045 27485838 + 27485818 27485858 41 GCCGGGCTGCGGGGCGGCGTCCCGTGCGCGCCTACGGGCTG GCCGGGCTGCGGGGCGGCGTCCCATGCGCGCCTACGGGCTG < 41bp 0.780689829694573 0.57157638134791 0.36115158 0.21227518 prediction 0.418226896693328 Functional Loss - ARNTL2 ENSG00000029153 UTR5 Human protein_coding chr12:27485838 chr12:27485841 . . 0 24 hm5C_associated_SNPs_90618 0 0 1 DDX3X POSTAR2 ENCODE chr12:27485819-27486002
64251 chr1 221057722 221057722 1 + C T COAD 221057719 + 221057699 221057739 41 GCTGAGAGCGAGAGCAGCGACTCCGAGTCCCTGGACATGGC GCTGAGAGCGAGAGCAGCGACTCTGAGTCCCTGGACATGGC < 41bp 0.741496077699981 0.532383761629748 0.23374844 0.11718345 prediction 0.418224632140467 Functional Loss - HLX ENSG00000136630 CDS Human protein_coding chr1:221057719 chr1:221057722 synonymous SNV . 0 24 hm5C_associated_SNPs_90620 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:221057698-221057736
64251 chr6 139017780 139017780 1 + G A rs4348337 139017777 + 139017757 139017797 41 GGCAAGGAGCTTTGTTCCTCCCCGATGTCACCCTCCCACAG GGCAAGGAGCTTTGTTCCTCCCCAATGTCACCCTCCCACAG < 41bp 0.709107919641289 0.46276944155616 0.07758641 0.07777402 prediction 0.418215839282578 Functional Loss - FLJ46906 ENSG00000225177 ncRNA_exonic Human antisense chr6:139017777 chr6:139017780 . . 0 24 hm5C_associated_SNPs_90623 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:139017739-139017788
64251 chr11 70052536 70052536 1 + C T ACC 70052533 + 70052513 70052553 41 GAACAGGAGTGGGGCCATGTCCCCGATGTCATGGAACTCAG GAACAGGAGTGGGGCCATGTCCCTGATGTCATGGAACTCAG < 41bp 0.734341331531522 0.525240097878891 0.23732063 0.24315447 prediction 0.418202467305264 Functional Loss - FADD ENSG00000168040 CDS Human protein_coding chr11:70052533 chr11:70052536 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_90627 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:70052528-70052548
64251 chr1 15890478 15890478 1 + G A BLCA 15890475 + 15890455 15890495 41 GAAGGGTGGTGTATAAAACCCTGGAAGACCCTTGGATTGGG GAAGGGTGGTGTATAAAACCCTGAAAGACCCTTGGATTGGG < 41bp 0.791304129609828 0.582202941058998 0.64048296 0.39589056 prediction 0.41820237710166 Functional Loss - DNAJC16 ENSG00000116138 CDS Human protein_coding chr1:15890475 chr1:15890478 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_90628 0 0 1 PPIG POSTAR2 ENCODE chr1:15890464-15890607
64251 chr5 137680657 137680657 1 + C T SKCM 137680655 + 137680635 137680675 41 CCCCAAGGAGCAGCCCTTCTCCCAAGTCCTAAGACCTGAGC CCCCAAGGAGCAGCCCTTCTCCTAAGTCCTAAGACCTGAGC < 41bp 0.709099886347673 0.425494324556528 0.39324665 0.32973117 prediction 0.418199772695347 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680655 chr5:137680657 stopgain 1.000 0 23 hm5C_associated_SNPs_90629 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:137680657-137680685
64251 chr9 21995109 21995109 1 + G C rs74582729 21995108 + 21995088 21995128 41 TCTGACGCGACATCTGGACACGGCGCGGCGCTGGCGCTGCC TCTGACGCGACATCTGGACACCGCGCGGCGCTGGCGCTGCC < 41bp 0.709098619837606 0.420781421887242 0.3540683 0.1470426 prediction 0.418197239675212 Functional Loss - CDKN2B-AS1 ENSG00000240498 ncRNA_exonic Human antisense chr9:21995108 chr9:21995109 . . 0 22 hm5C_associated_SNPs_90630 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:21995096-21995120
64251 chr5 177034432 177034432 1 + G T SARC 177034428 + 177034408 177034448 41 GGACTATGGCTTTCCTGAGGCTGGGCCCTTCCACGTGGCCT GGACTATGGCTTTCCTGAGGCTGGTCCCTTCCACGTGGCCT < 41bp 0.711019101082777 0.501924766155948 0.8033422 0.45057738 prediction 0.418188669853657 Functional Loss - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177034428 chr5:177034432 synonymous SNV . 0 25 hm5C_associated_SNPs_90631 0 0 3 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr5:177034409-177034435
64251 chr14 59112424 59112424 1 + C T UCEC 59112421 + 59112401 59112441 41 AGGACCAACAAACCAAGAACCAGCGTGAACGCTGACCCCAC AGGACCAACAAACCAAGAACCAGTGTGAACGCTGACCCCAC < 41bp 0.733884393504037 0.524791753128827 0.21926463 0.5198426 prediction 0.41818528075042 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112421 chr14:59112424 synonymous SNV . 0 24 hm5C_associated_SNPs_90633 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59112421-59112457
64251 chr4 5800490 5800490 1 + A T ESCA 5800486 + 5800466 5800506 41 CATGCACGGAATGCAGCCACCAAGAGCCGGGCCAAGGACAG CATGCACGGAATGCAGCCACCAAGTGCCGGGCCAAGGACAG < 41bp 0.709089867299074 0.386715806846602 0.25864676 0.21630016 prediction 0.418179734598148 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5800486 chr4:5800490 nonsynonymous SNV 0.617 2 25 hm5C_associated_SNPs_90635 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:5800487-5800515
64251 chr3 196449372 196449372 1 + G A rs377629523 196449369 + 196449349 196449389 41 AATTAAACAGGACATTCCTGCAGGACTTTATGTGGATCCGT AATTAAACAGGACATTCCTGCAGAACTTTATGTGGATCCGT < 41bp 0.779782722274699 0.570698841178659 0.6632359 0.27913707 prediction 0.418167762192081 Functional Loss - PIGX ENSG00000163964 CDS Human protein_coding chr3:196449369 chr3:196449372 nonsynonymous SNV 0.962 4 24 hm5C_associated_SNPs_90638 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:196449350-196449376
64251 chr11 61563908 61563908 1 + G T UCEC 61563906 + 61563886 61563926 41 TTCAGCTAAGCGCAAGGAGCCAGAACCCAAGGGATCCACTA TTCAGCTAAGCGCAAGGAGCCATAACCCAAGGGATCCACTA < 41bp 0.709078333895538 0.357697729367811 0.45947063 0.10959962 prediction 0.418156667791076 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563906 chr11:61563908 stopgain 0.999 1 23 hm5C_associated_SNPs_90639 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:61563857-61563925
64251 chr17 2265520 2265520 1 + G A BLCA 2265517 + 2265497 2265537 41 TGGGTACGCACGGCGCTCATCGAGAAAGTTCTGGACAAGGT TGGGTACGCACGGCGCTCATCGAAAAAGTTCTGGACAAGGT < 41bp 0.789672465730605 0.580596851943594 0.70227706 0.48592284 prediction 0.418151227574022 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2265517 chr17:2265520 synonymous SNV . 0 24 hm5C_associated_SNPs_90640 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:2265519-2265555
64251 chr17 45016358 45016358 1 + C T rs367735669 45016356 + 45016336 45016376 41 GCTTAGGAAATGAAAGAAGTCCCGGGTCTGTCTCTCTCACT GCTTAGGAAATGAAAGAAGTCCTGGGTCTGTCTCTCTCACT < 41bp 0.783090929753854 0.574018373568278 0.3549916 0.41169912 prediction 0.418145112371152 Functional Loss - GOSR2 ENSG00000108433 UTR3 Human protein_coding chr17:45016356 chr17:45016358 . . 0 23 hm5C_associated_SNPs_90642 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:45016322-45016380
64251 chr9 117092830 117092830 1 + G A COAD 117092827 + 117092807 117092847 41 ACCCCCAACAAGACAGAGGACACGATCTTTCTCAGAGAGTA ACCCCCAACAAGACAGAGGACACAATCTTTCTCAGAGAGTA < 41bp 0.709070817339511 0.472832423003801 0.014503747 0.024045378 prediction 0.418141634679022 Functional Loss - ORM2 ENSG00000228278 CDS Human protein_coding chr9:117092827 chr9:117092830 synonymous SNV . 0 24 hm5C_associated_SNPs_90643 0 0 2 LARP4 POSTAR2 ENCODE chr9:117092822-117092842
64251 chr9 117092829 117092829 1 + C T STAD 117092827 + 117092807 117092847 41 ACCCCCAACAAGACAGAGGACACGATCTTTCTCAGAGAGTA ACCCCCAACAAGACAGAGGACATGATCTTTCTCAGAGAGTA < 41bp 0.709070817339511 0.435038958873791 0.014503747 0.040005803 prediction 0.418141634679022 Functional Loss - ORM2 ENSG00000228278 CDS Human protein_coding chr9:117092827 chr9:117092829 nonsynonymous SNV 0.003 3 23 hm5C_associated_SNPs_90644 0 0 3 DDX55 POSTAR2 ENCODE chr9:117092823-117092829
64251 chr17 4799807 4799807 1 + G A OV 4799804 + 4799784 4799824 41 ATGCTGCTGTGCTACGAGGACGAGGGTGTCTACGTCAACAC ATGCTGCTGTGCTACGAGGACGAAGGTGTCTACGTCAACAC < 41bp 0.709066476010127 0.463268008209621 0.82095337 0.24078947 prediction 0.418132952020253 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799804 chr17:4799807 synonymous SNV . 0 24 hm5C_associated_SNPs_90649 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:4799797-4799826
64251 chr1 46726527 46726527 1 + C T STAD 46726525 + 46726505 46726545 41 CATTGATGTGGACACTTTTACGCCAGAGTCCAGAGTGCAAG CATTGATGTGGACACTTTTACGTCAGAGTCCAGAGTGCAAG < 41bp 0.873623210748802 0.664571971148309 0.27749538 0.21101186 prediction 0.418102479200986 Functional Loss - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46726525 chr1:46726527 synonymous SNV . 0 23 hm5C_associated_SNPs_90659 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:46726520-46726540
64251 chr16 30594477 30594477 1 - G A COAD 30594479 - 30594459 30594499 41 CTCCTGCGGCCAGTGTCAGGCGCGTTTCTCCCAGCGCAGGT CTCCTGCGGCCAGTGTCAGGCGTGTTTCTCCCAGCGCAGGT < 41bp 0.810782248050137 0.601733877614072 0.05212125 0.03673336 prediction 0.418096740872129 Functional Loss - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594479 chr16:30594477 nonsynonymous SNV 0.228 0 23 hm5C_associated_SNPs_90660 0 0 1 GEMIN5 POSTAR2 ENCODE chr16:30594413-30594487
64251 chr15 43663581 43663581 1 + G T SARC 43663577 + 43663557 43663597 41 TCCACGAACTGCTCTTGGCTCTGAGCGGGTACCCTGGGTCC TCCACGAACTGCTCTTGGCTCTGATCGGGTACCCTGGGTCC < 41bp 0.746223827728098 0.537179934537135 0.32113147 0.19915634 prediction 0.418087786381925 Functional Loss - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43663577 chr15:43663581 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_90665 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:43663555-43663593
64251 chr13 32889721 32889721 1 + G T rs55641815 32889718 + 32889698 32889738 41 TTGCGGCGGTGGGTCGCCGCCGGGAGAAGCGTGAGGGGACA TTGCGGCGGTGGGTCGCCGCCGGTAGAAGCGTGAGGGGACA < 41bp 0.903225019477777 0.694185002753118 0.91222274 0.8575425 prediction 0.418080033449318 Functional Loss - BRCA2 ENSG00000139618 UTR5 Human protein_coding chr13:32889718 chr13:32889721 . . 0 24 hm5C_associated_SNPs_90668 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr13:32889720-32889721
64251 chr9 132397704 132397704 1 + C T LUAD 132397701 + 132397681 132397721 41 GAGGAGAGGCAGGAGAACCTCCCCGATGAGATCTACCATGT GAGGAGAGGCAGGAGAACCTCCCTGATGAGATCTACCATGT < 41bp 0.734048406053738 0.525008898367808 0.19921675 0.19267899 prediction 0.41807901537186 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397701 chr9:132397704 synonymous SNV . 0 24 hm5C_associated_SNPs_90669 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:132397703-132397704
64251 chr6 170700152 170700152 1 + T C UCEC 170700151 + 170700131 170700171 41 AAGGCAGTCGTCTGCAAGGCCTGCATGAAGGAGAACAGACG AAGGCAGTCGTCTGCAAGGCCCGCATGAAGGAGAACAGACG < 41bp 0.70903835379993 0.43097850541904 0.123040885 0.035775572 prediction 0.418076707599861 Functional Loss - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170700151 chr6:170700152 nonsynonymous SNV 0.631 4 22 hm5C_associated_SNPs_90670 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:170700148-170700171
64251 chr19 10943821 10943821 1 + G A ESCA 10943818 + 10943798 10943838 41 TGCAGGTTGCGGTCACGTGCCTCGAAGGCCCGCAGTAGCGT TGCAGGTTGCGGTCACGTGCCTCAAAGGCCCGCAGTAGCGT < 41bp 0.709036560760575 0.480361158399669 0.32739162 0.23849389 prediction 0.418073121521151 Functional Loss - TMED1 ENSG00000079805;ENSG00000099203 CDS Human other chr19:10943818 chr19:10943821 nonsynonymous SNV 0.979 0 24 hm5C_associated_SNPs_90671 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10943814-10943847
64251 chr13 32527150 32527150 1 + G T LUSC 32527146 + 32527126 32527166 41 GATGACATTGACCTGTTTGGCAGCGACAATGAGGCAACACA GATGACATTGACCTGTTTGGCAGCTACAATGAGGCAACACA < 41bp 0.714455834310281 0.505422386740736 0.8217974 0.84376174 prediction 0.418066895139089 Functional Loss - EEF1DP3 ENSG00000229715 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr13:32527146 chr13:32527150 . . 0 25 hm5C_associated_SNPs_90673 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr13:32527126-32527152
64251 chr19 10568687 10568687 1 + G A SKCM 10568684 + 10568664 10568704 41 ACAGCCCATGTCCCAAATCACAGGGTTGAAAAAGTTGATGC ACAGCCCATGTCCCAAATCACAGAGTTGAAAAAGTTGATGC < 41bp 0.805478215010145 0.596446003599527 0.94931513 0.94320536 prediction 0.418064422821236 Functional Loss - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10568684 chr19:10568687 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_90674 0 0 1 YBX3 POSTAR2 ENCODE chr19:10568677-10568779
64251 chr19 17883492 17883492 1 + C T UCEC 17883489 + 17883469 17883509 41 AAGCAGAACATCGAGAACGTCAGCGTGGAGATGCTACTCAG AAGCAGAACATCGAGAACGTCAGTGTGGAGATGCTACTCAG < 41bp 0.734443311358587 0.525418101500074 0.3809788 0.13685581 prediction 0.418050419717025 Functional Loss - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17883489 chr19:17883492 synonymous SNV . 0 24 hm5C_associated_SNPs_90678 0 0 6 DDX24 POSTAR2 ENCODE chr19:17883477-17883552
64251 chr16 90109728 90109728 1 + C T MESO 90109726 + 90109706 90109746 41 CAGACACTGGGCCAGGGCCCCGCGGGACTGGTGGGCACCCC CAGACACTGGGCCAGGGCCCCGTGGGACTGGTGGGCACCCC < 41bp 0.819183551777943 0.610165358067452 0.8186295 0.45410642 prediction 0.418036387420981 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90109726 chr16:90109728 nonsynonymous SNV 0.725 2 23 hm5C_associated_SNPs_90681 0 0 1 SRSF1 POSTAR2 ENCODE chr16:90109633-90109768
64251 chr11 75282990 75282990 1 + C T UCEC 75282988 + 75282968 75283008 41 TTGACCAGGACATCTACGGGCGCGAGGAGCTGCGCAGCCCC TTGACCAGGACATCTACGGGCGTGAGGAGCTGCGCAGCCCC < 41bp 0.859683675708699 0.65067044113036 0.50501376 0.4741698 prediction 0.418026469156678 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75282988 chr11:75282990 synonymous SNV . 0 23 hm5C_associated_SNPs_90687 0 0 8 METAP2 POSTAR2 ENCODE chr11:75282950-75283027
64251 chr1 214816273 214816273 1 + T C STAD 214816272 + 214816252 214816292 41 ATGAAGTATTTTGCAGCAGTCTGCAGGAGGAGAATCTGACC ATGAAGTATTTTGCAGCAGTCCGCAGGAGGAGAATCTGACC < 41bp 0.709010168302904 0.472943835252423 0.564685 0.30767098 prediction 0.418020336605808 Functional Loss - CENPF ENSG00000117724 CDS Human protein_coding chr1:214816272 chr1:214816273 nonsynonymous SNV 0.503 0 22 hm5C_associated_SNPs_90690 0 0 18 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214816207-214816302
64251 chr10 8006663 8006663 1 + G A SKCM 8006660 + 8006640 8006680 41 CTCTATCGATGCTGTGATTGCACGAGCCTGTGCTGAGCGAG CTCTATCGATGCTGTGATTGCACAAGCCTGTGCTGAGCGAG < 41bp 0.824736778983408 0.615731331667874 0.7620028 0.47475904 prediction 0.418010894631069 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8006660 chr10:8006663 nonsynonymous SNV 0.956 4 24 hm5C_associated_SNPs_90694 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:8006646-8006684
64251 chr19 18971211 18971211 1 + A T LUAD 18971207 + 18971187 18971227 41 TCTTCTACGTGACCCAGGGCCAAGAGGAGATTGCCAGCTCG TCTTCTACGTGACCCAGGGCCAAGTGGAGATTGCCAGCTCG < 41bp 0.709004564727104 0.383101474329849 0.88702583 0.87199205 prediction 0.418009129454207 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18971207 chr19:18971211 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_90695 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr19:18971176-18971216
64251 chr15 75091628 75091628 1 + G T ACC 75091625 + 75091605 75091645 41 CTCCCCAGTTGGTTCCACGGCAAGATCACACGGGAGCAGGC CTCCCCAGTTGGTTCCACGGCAATATCACACGGGAGCAGGC < 41bp 0.709003917223512 0.304499942052726 0.17689994 0.07702571 prediction 0.418007834447024 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75091625 chr15:75091628 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_90696 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:75091620-75091640
64251 chr7 2652804 2652804 1 + C T rs151069181 2652802 + 2652782 2652822 41 CAGCCACAGGAGATGTCAGTCTCCAGGGCCTGGCCCCACTG CAGCCACAGGAGATGTCAGTCTTCAGGGCCTGGCCCCACTG < 41bp 0.709002343948661 0.473616301000993 0.9509972 0.25645447 prediction 0.418004687897321 Functional Loss - IQCE ENSG00000106012 UTR3 Human protein_coding chr7:2652802 chr7:2652804 . . 0 23 hm5C_associated_SNPs_90697 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:2652796-2652822
64251 chr2 85823673 85823673 1 + T C PAAD 85823672 + 85823652 85823692 41 AATAGGATGGACTTTGAAGACTTGGGGTTGGTAGTAGATTG AATAGGATGGACTTTGAAGACCTGGGGTTGGTAGTAGATTG < 41bp 0.802418869525695 0.593417600996939 0.16685957 0.2962714 prediction 0.418002537057514 Functional Loss - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85823672 chr2:85823673 synonymous SNV . 0 22 hm5C_associated_SNPs_90698 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:85823648-85823677
64251 chr2 118583085 118583085 1 + A C UCEC 118583081 + 118583061 118583101 41 CCAGTTCTGCAATGCAGATTCGGGAACACTATTGTGTACGG CCAGTTCTGCAATGCAGATTCGGGCACACTATTGTGTACGG < 41bp 0.93425610873215 0.725256390942859 0.84974575 0.44008365 prediction 0.417999435578583 Functional Loss - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118583081 chr2:118583085 synonymous SNV . 0 25 hm5C_associated_SNPs_90699 0 0 12 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:118583040-118583100
64251 chr14 70237961 70237961 1 + G A UCEC 70237958 + 70237938 70237978 41 GACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCC GACCAGAAGTTCCTCTAGGTCTCATAGCCGATCCCGTTCCC < 41bp 0.79683725314695 0.587839424859189 0.42273825 0.30729532 prediction 0.417995656575523 Functional Loss - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70237958 chr14:70237961 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_90701 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:70237908-70237978
64251 chr20 6759633 6759633 1 + C T UCEC 6759631 + 6759611 6759651 41 ATTCCTAAGGCATGCTGTGTCCCGACAGAACTCAGTGCTAT ATTCCTAAGGCATGCTGTGTCCTGACAGAACTCAGTGCTAT < 41bp 0.708992492243673 0.423216263240533 0.055597275 0.11885786 prediction 0.417984984487346 Functional Loss - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6759631 chr20:6759633 nonsynonymous SNV 0.990 5 23 hm5C_associated_SNPs_90706 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:6759600-6759640
64251 chr1 32669813 32669813 1 + G A COAD 32669810 + 32669790 32669830 41 AGGAATGCTCCTTTGAGCAGCTGGAGCACGTTCGGGAGATG AGGAATGCTCCTTTGAGCAGCTGAAGCACGTTCGGGAGATG < 41bp 0.81311643794132 0.604128214388513 0.33175796 0.5734174 prediction 0.417976447105614 Functional Loss - CCDC28B ENSG00000160050 CDS Human protein_coding chr1:32669810 chr1:32669813 nonsynonymous SNV 0.864 4 24 hm5C_associated_SNPs_90707 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:32669807-32669826
64251 chr22 29876374 29876374 1 + T C rs7288867 29876373 + 29876353 29876393 41 AGGCGGGACGCGCTCCGCCGCTGGCTCCTCCAGCGGCTTCC AGGCGGGACGCGCTCCGCCGCCGGCTCCTCCAGCGGCTTCC < 41bp 0.708986823882139 0.499600774996547 0.6449921 0.78945345 prediction 0.417973647764277 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29876373 chr22:29876374 synonymous SNV . 0 22 hm5C_associated_SNPs_90708 0 0 1 DDX3X POSTAR2 ENCODE chr22:29876236-29876390
64251 chr5 60368966 60368966 1 + G A LUSC 60368963 + 60368943 60368983 41 GTCTTATAGGACAAACTATTCGAGAGAAAAGAATTGTAGAA GTCTTATAGGACAAACTATTCGAAAGAAAAGAATTGTAGAA < 41bp 0.723573963999054 0.514591481355678 0.874258 0.33195454 prediction 0.417964965286753 Functional Loss - NDUFAF2 ENSG00000164182 CDS Human protein_coding chr5:60368963 chr5:60368966 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_90711 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr5:60368952-60368974
64251 chr4 6695708 6695708 1 + C T rs543945473 6695706 + 6695686 6695726 41 CATGATCATAGACGTCTTTTCCCGATATTCGGGCAGCGAGG CATGATCATAGACGTCTTTTCCTGATATTCGGGCAGCGAGG < 41bp 0.828284540788775 0.619303100773176 0.40357503 0.27005583 prediction 0.417962880031198 Functional Loss - S100P ENSG00000163993 CDS Human protein_coding chr4:6695706 chr4:6695708 stopgain 0.002 0 23 hm5C_associated_SNPs_90712 0 0 7 AUH POSTAR2 ENCODE chr4:6695704-6695772
64251 chr16 68330381 68330381 1 + C T rs193099058 68330378 + 68330358 68330398 41 CTGTTGTTGGACAGCTCTACCTCCGCTGGAAGGAGCCCAAG CTGTTGTTGGACAGCTCTACCTCTGCTGGAAGGAGCCCAAG < 41bp 0.776167418048415 0.567189028012751 0.33066988 0.21929514 prediction 0.417956780071328 Functional Loss - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330378 chr16:68330381 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_90714 0 0 2 PRPF8 POSTAR2 ENCODE chr16:68330380-68330457
64251 chr1 3542374 3542374 1 + C T UCEC 3542371 + 3542351 3542391 41 ACTTCATCAGTCTCCAGTGCCAGCAGGTGGTGCGGATAGCG ACTTCATCAGTCTCCAGTGCCAGTAGGTGGTGCGGATAGCG < 41bp 0.741282858761382 0.532304951146767 0.44286564 0.08315027 prediction 0.417955815229231 Functional Loss - TPRG1L ENSG00000158109 CDS Human protein_coding chr1:3542371 chr1:3542374 stopgain 1.000 1 24 hm5C_associated_SNPs_90715 0 0 2 PUM2 POSTAR2 ENCODE chr1:3542295-3542385
64251 chr3 178928251 178928251 1 + G A UCEC 178928248 + 178928228 178928268 41 TGCTTAGAGTTGGAGTTTGACTGGTTCAGCAGTGTGGTAAA TGCTTAGAGTTGGAGTTTGACTGATTCAGCAGTGTGGTAAA < 41bp 0.785484316780534 0.576506565480652 0.26509959 0.17680493 prediction 0.417955502599763 Functional Loss - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178928248 chr3:178928251 stopgain 1.000 0 24 hm5C_associated_SNPs_90716 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:178928229-178928261
64251 chr16 85689494 85689494 1 + G A rs59732374 85689491 + 85689471 85689511 41 TCATCCCTGGCAGCGCTGCACTCGGAGCGCATGTCTGGCCT TCATCCCTGGCAGCGCTGCACTCAGAGCGCATGTCTGGCCT < 41bp 0.820071576240336 0.611094817007066 0.2709361 0.044853598 prediction 0.417953518466538 Functional Loss - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85689491 chr16:85689494 synonymous SNV . 0 24 hm5C_associated_SNPs_90717 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr16:85689472-85689499
64251 chr5 162869531 162869531 1 + G T UCEC 162869529 + 162869509 162869549 41 CAATTGAAGCATAGCTACTACAGAATAACTCACCTTCCAAC CAATTGAAGCATAGCTACTACATAATAACTCACCTTCCAAC < 41bp 0.708975706030612 0.380733217636675 0.4282947 0.13247648 prediction 0.417951412061224 Functional Loss - CCNG1 ENSG00000113328 CDS Human protein_coding chr5:162869529 chr5:162869531 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_90718 0 0 41 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:162869397-162869563
64251 chr17 37026404 37026404 1 + G A rs558156219 37026401 + 37026381 37026421 41 TCGCCTCGGGGAACAGGACGCGCGTGAGCTCAGGCGTCCCC TCGCCTCGGGGAACAGGACGCGCATGAGCTCAGGCGTCCCC < 41bp 0.708975004043446 0.492222183344382 0.6589618 0.34584004 prediction 0.417950008086892 Functional Loss - LASP1 ENSG00000002834 UTR5 Human protein_coding chr17:37026401 chr17:37026404 . . 0 24 hm5C_associated_SNPs_90720 0 0 2 DDX3X POSTAR2 ENCODE chr17:37026316-37026423
64251 chr10 98741546 98741546 1 + G T UCEC 98741543 + 98741523 98741563 41 GCAAATGGACACTCAAGAACCAAGATGATATCAACCTCCAT GCAAATGGACACTCAAGAACCAATATGATATCAACCTCCAT < 41bp 0.708973932706089 0.328654480698443 0.09777069 0.093337685 prediction 0.417947865412177 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98741543 chr10:98741546 nonsynonymous SNV 0.939 3 24 hm5C_associated_SNPs_90722 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:98741516-98741554
64251 chr11 640146 640146 1 + C T rs565037800 640144 + 640124 640164 41 CCGACTGTGCGCCCCCCGCGCCCGGCCTCCCCCCGGACCCC CCGACTGTGCGCCCCCCGCGCCTGGCCTCCCCCCGGACCCC < 41bp 0.722415549171199 0.513448123883342 0.33632636 0.2091589 prediction 0.417934850575714 Functional Loss - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640144 chr11:640146 synonymous SNV . 0 23 hm5C_associated_SNPs_90724 0 0 1 XRN2 POSTAR2 ENCODE chr11:640125-640173
64251 chr7 100864561 100864561 1 + G A rs112242500 100864558 + 100864538 100864578 41 CACTCAGGCTGGAGTGGTGGCGCGATCACGGCTTGCTGCAC CACTCAGGCTGGAGTGGTGGCGCAATCACGGCTTGCTGCAC < 41bp 0.803787877529656 0.594823518126267 0.8705081 0.38326225 prediction 0.417928718806777 Functional Loss - ZNHIT1 ENSG00000106400 intronic Human protein_coding chr7:100864558 chr7:100864561 . . 0 24 hm5C_associated_SNPs_90727 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:100864536-100864561
64251 chr12 56361888 56361888 1 + C T COAD 56361885 + 56361865 56361905 41 TCTACCTGGTTTTTGAATTTCTGCACCAAGATCTCAAGAAA TCTACCTGGTTTTTGAATTTCTGTACCAAGATCTCAAGAAA < 41bp 0.708963542351711 0.48867264221438 0.03769341 0.09136626 prediction 0.417927084703423 Functional Loss - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56361885 chr12:56361888 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_90728 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56361855-56361894
64251 chr1 161140467 161140467 1 + C T CESC 161140465 + 161140445 161140485 41 GGCTAGTGGCTGTGTCTTATCTCAGGAGCTGTTTCAACAGC GGCTAGTGGCTGTGTCTTATCTTAGGAGCTGTTTCAACAGC < 41bp 0.861261022284381 0.652303504608766 0.06774342 0.1286749 prediction 0.41791503535123 Functional Loss - PPOX ENSG00000143224 CDS Human protein_coding chr1:161140465 chr1:161140467 stopgain 0.667 0 23 hm5C_associated_SNPs_90732 0 0 4 DDX6 POSTAR2 ENCODE chr1:161140466-161140510
64251 chr7 143002246 143002246 1 + C T rs137974186 143002244 + 143002224 143002264 41 AGCCTTTGATCTTCAGGATGCACGGTTTCTGTTCTGCCCCC AGCCTTTGATCTTCAGGATGCATGGTTTCTGTTCTGCCCCC < 41bp 0.794056745744679 0.585099299669638 0.33352664 0.36026454 prediction 0.417914892150082 Functional Loss - CASP2 ENSG00000106144 UTR3 Human protein_coding chr7:143002244 chr7:143002246 . . 0 23 hm5C_associated_SNPs_90733 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:143002188-143002277
64251 chr13 28239970 28239970 1 + G A rs14105 28239967 + 28239947 28239987 41 CAGGCCCAGAAAGAAGAAAACCCGAAGAAACACAGAAGCCA CAGGCCCAGAAAGAAGAAAACCCAAAGAAACACAGAAGCCA < 41bp 0.757277588990257 0.548320643967519 0.1467869 0.18582284 prediction 0.417913890045477 Functional Loss - POLR1D ENSG00000186184 CDS Human protein_coding chr13:28239967 chr13:28239970 synonymous SNV . 0 24 hm5C_associated_SNPs_90735 0 0 1 NOP58 POSTAR2 GSE43666,GSM1067862 chr13:28239959-28239997
64251 chr12 57919314 57919314 1 + G A UCEC 57919311 + 57919291 57919331 41 CCCTGGGGGGCTTTTCCCCCCAAGGCTTGCTGACCCAGTCC CCCTGGGGGGCTTTTCCCCCCAAAGCTTGCTGACCCAGTCC < 41bp 0.708952974860437 0.442119965976312 0.81643564 0.4520113 prediction 0.417905949720874 Functional Loss - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919311 chr12:57919314 nonsynonymous SNV 0.974 0 24 hm5C_associated_SNPs_90737 0 0 9 STAU1 POSTAR2 E-MTAB-2937,ERR605258 chr12:57919300-57919320
64251 chr5 56207251 56207251 1 + G T UCEC 56207248 + 56207228 56207268 41 AAACCAGAAGAAATTCTTTACAAGACTTTGGGTTTCAGTGT AAACCAGAAGAAATTCTTTACAATACTTTGGGTTTCAGTGT < 41bp 0.708952659132186 0.326840581495921 0.111056656 0.079224855 prediction 0.417905318264371 Functional Loss - SETD9 ENSG00000155542 CDS Human protein_coding chr5:56207248 chr5:56207251 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_90739 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:56207220-56207251
64251 chrX 129185990 129185990 1 + G T THCA 129185987 + 129185967 129186007 41 ACCTCCAAGTGTCAGTGTCCCGCGGGTAAGTGTCCGAGAGA ACCTCCAAGTGTCAGTGTCCCGCTGGTAAGTGTCCGAGAGA < 41bp 0.708952336298295 0.308473971494212 0.9296968 0.2633649 prediction 0.417904672596589 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185987 chrX:129185990 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_90740 0 0 1 DDX24 POSTAR2 ENCODE chrX:129185902-129185992
64251 chrX 129185989 129185989 1 + C T UCEC 129185987 + 129185967 129186007 41 ACCTCCAAGTGTCAGTGTCCCGCGGGTAAGTGTCCGAGAGA ACCTCCAAGTGTCAGTGTCCCGTGGGTAAGTGTCCGAGAGA < 41bp 0.708952336298295 0.438252984977754 0.9296968 0.9008342 prediction 0.417904672596589 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129185987 chrX:129185989 synonymous SNV . 0 23 hm5C_associated_SNPs_90741 0 0 1 DDX24 POSTAR2 ENCODE chrX:129185902-129185992
64251 chr19 35551306 35551306 1 + C T COAD 35551303 + 35551283 35551323 41 ATCGTGGGAGGCCGGGACACCAGCTTGGGCCGGTGGCCGTG ATCGTGGGAGGCCGGGACACCAGTTTGGGCCGGTGGCCGTG < 41bp 0.737874478443776 0.528923567163776 0.3954097 0.34716988 prediction 0.41790182256 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35551303 chr19:35551306 synonymous SNV . 0 24 hm5C_associated_SNPs_90744 0 0 4 GRWD1 POSTAR2 ENCODE chr19:35551301-35551332
64251 chr2 28635102 28635102 1 + C T UCEC 28635099 + 28635079 28635119 41 ATCAGCATTGCTGGGGGCTTCTACGGTGAGGAGCCCCTGCA ATCAGCATTGCTGGGGGCTTCTATGGTGAGGAGCCCCTGCA < 41bp 0.746560605242862 0.537610987026124 0.8746757 0.6994284 prediction 0.417899236433478 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28635099 chr2:28635102 synonymous SNV . 0 24 hm5C_associated_SNPs_90746 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr2:28635100-28635140
64251 chr12 81627225 81627225 1 + G T UCEC 81627223 + 81627203 81627243 41 GTAATAAATGTTGCAGGTCACAGAATTTCTGCAGGCGCCAT GTAATAAATGTTGCAGGTCACATAATTTCTGCAGGCGCCAT < 41bp 0.708945993014366 0.367527999350374 0.2835721 0.2310287 prediction 0.417891986028731 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81627223 chr12:81627225 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_90749 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:81627137-81627252
64251 chr19 17306024 17306024 1 + C T SARC 17306021 + 17306001 17306041 41 CCTGGACAGCAGGGTCAGCCCACCGGCCCCTGGCAGCGCCC CCTGGACAGCAGGGTCAGCCCACTGGCCCCTGGCAGCGCCC < 41bp 0.712753590840352 0.50381242481654 0.31859875 0.2662856 prediction 0.417882332047624 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17306021 chr19:17306024 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_90753 0 0 2 BUD13 POSTAR2 ENCODE chr19:17305981-17306044
64251 chr7 73971992 73971992 1 + C T COAD 73971990 + 73971970 73972010 41 AAATTATGACGCGAGGCTCTCACGGATCGACATCGCCAACA AAATTATGACGCGAGGCTCTCATGGATCGACATCGCCAACA < 41bp 0.708939324472033 0.427816953527351 0.8076814 0.8417853 prediction 0.417878648944065 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73971990 chr7:73971992 nonsynonymous SNV 0.202 4 23 hm5C_associated_SNPs_90755 0 0 1 DDX24 POSTAR2 ENCODE chr7:73971973-73972009
64251 chr11 592657 592657 1 + C T GBM 592654 + 592634 592674 41 CGTGAGGACAGGCTTTTGCTCTGCGACGGCTGCGATGCGGG CGTGAGGACAGGCTTTTGCTCTGTGACGGCTGCGATGCGGG < 41bp 0.746147580577913 0.53721372102976 0.25102508 0.2869138 prediction 0.417867719096306 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:592654 chr11:592657 synonymous SNV . 0 24 hm5C_associated_SNPs_90758 0 0 17 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:592640-592660
64251 chr17 56787293 56787293 1 + G A UCEC 56787290 + 56787270 56787310 41 AGATGACCTGTCTCTTCGTACTCGGTTATTAAATGGCCTAG AGATGACCTGTCTCTTCGTACTCAGTTATTAAATGGCCTAG < 41bp 0.708933593999427 0.478467778739877 0.53865075 0.2608915 prediction 0.417867187998855 Functional Loss - RAD51C ENSG00000108384 CDS Human protein_coding chr17:56787290 chr17:56787293 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_90760 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:56787245-56787299
64251 chr21 47424229 47424229 1 + G T rs538359005 47424226 + 47424206 47424246 41 CGTCACCTGTGCAGGGCCCTCTGGGGCTCAGCCCTGAGCTG CGTCACCTGTGCAGGGCCCTCTGTGGCTCAGCCCTGAGCTG < 41bp 0.930350785333237 0.721419134087017 0.31715614 0.092505485 prediction 0.41786330249244 Functional Loss - COL6A1 ENSG00000142156 UTR3 Human protein_coding chr21:47424226 chr21:47424229 . . 0 24 hm5C_associated_SNPs_90763 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:47424199-47424280
64251 chr19 54080061 54080061 1 + T C LUAD 54080060 + 54080040 54080080 41 AGTAAATCCCTTGGCCGTAACTGGATATGTGAAGGTACGCT AGTAAATCCCTTGGCCGTAACCGGATATGTGAAGGTACGCT < 41bp 0.780626217158144 0.571695003118559 0.7506268 0.88540643 prediction 0.417862428079169 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080060 chr19:54080061 nonsynonymous SNV 0.142 0 22 hm5C_associated_SNPs_90765 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:54080041-54080062
64251 chr19 19627086 19627086 1 + G C DLBC 19627082 + 19627062 19627102 41 GGTGAAGCAGGACATGCCTCCGCCGGGGGGCTATGGGCCCA GGTGAAGCAGGACATGCCTCCGCCCGGGGGCTATGGGCCCA < 41bp 0.867898235495675 0.658967583564092 0.56134075 0.11431563 prediction 0.417861303863165 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19627082 chr19:19627086 synonymous SNV . 0 25 hm5C_associated_SNPs_90766 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr4 5800369 5800369 1 + G T STAD 5800367 + 5800347 5800387 41 AGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGG AGGAGGAAGCACAGCAGACACGTCTGCAGCTCCAGCAGCGG < 41bp 0.708928983049834 0.354013163746215 0.4568124 0.15231904 prediction 0.417857966099669 Functional Loss - EVC ENSG00000072840 CDS Human protein_coding chr4:5800367 chr4:5800369 synonymous SNV . 0 23 hm5C_associated_SNPs_90767 0 0 2 BUD13 POSTAR2 ENCODE chr4:5800317-5800371
64251 chr7 100730774 100730774 1 + G C BLCA 100730773 + 100730753 100730793 41 GTCCGCTGCCCCGAGTGCCGCGAGACAGTGCCTGTGCCGCC GTCCGCTGCCCCGAGTGCCGCCAGACAGTGCCTGTGCCGCC < 41bp 0.891999399997202 0.683072456136148 0.90071225 0.72102654 prediction 0.417853887722108 Functional Loss - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730773 chr7:100730774 nonsynonymous SNV 0.027 0 22 hm5C_associated_SNPs_90769 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:100730760-100730780
64251 chr12 69753568 69753568 1 + A T rs556184729 69753564 + 69753544 69753584 41 CCTGCGCGGGCCTGAATGGCCTTCAGGAGCACAGTCGGCCT CCTGCGCGGGCCTGAATGGCCTTCTGGAGCACAGTCGGCCT < 41bp 0.878034856680776 0.669113813794991 0.4040506 0.37031883 prediction 0.41784208577157 Functional Loss - YEATS4 ENSG00000127337 UTR5 Human protein_coding chr12:69753564 chr12:69753568 . . 0 25 hm5C_associated_SNPs_90774 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr12:69753540-69753600
64251 chr12 542364 542364 1 + G A SKCM 542361 + 542341 542381 41 TGGAAGCACTGCAGGCTCAGCTGGGAGAGCAGACCAAACTT TGGAAGCACTGCAGGCTCAGCTGAGAGAGCAGACCAAACTT < 41bp 0.810502265168641 0.601584311517311 0.85027236 0.7521397 prediction 0.417835907302661 Functional Loss - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:542361 chr12:542364 nonsynonymous SNV 0.941 2 24 hm5C_associated_SNPs_90776 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:542337-542365
64251 chr19 5667066 5667066 1 + G A HNSC 5667063 + 5667043 5667083 41 TCTGTGATGTCCAGCATTACCCAGAACGCCATGGAGGACCA TCTGTGATGTCCAGCATTACCCAAAACGCCATGGAGGACCA < 41bp 0.797563393796485 0.588646998106488 0.17850289 0.1162138 prediction 0.417832791379994 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667063 chr19:5667066 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_90779 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:5666897-5667105
64251 chr11 61541490 61541490 1 + G T LUAD 61541486 + 61541466 61541506 41 GGACAAGGGCTTCAACTTTTCGGTGGGCGACGACGCCTTTG GGACAAGGGCTTCAACTTTTCGGTTGGCGACGACGCCTTTG < 41bp 0.743401884982452 0.534487036140248 0.81204736 0.5710255 prediction 0.417829697684408 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61541486 chr11:61541490 synonymous SNV . 0 25 hm5C_associated_SNPs_90780 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:61541467-61541507
64251 chr9 139814797 139814797 1 + G A rs144427288 139814794 + 139814774 139814814 41 CCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTG CCCTCTTGGGAGACCAGAGCCACACGGGGTCAGAGCTCCTG < 41bp 0.708905783638864 0.45737289964211 0.18738389 0.20214754 prediction 0.417811567277728 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139814794 chr9:139814797 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_90787 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139814792-139814817
64251 chr9 139814796 139814796 1 + C T STAD 139814794 + 139814774 139814814 41 CCCTCTTGGGAGACCAGAGCCACGCGGGGTCAGAGCTCCTG CCCTCTTGGGAGACCAGAGCCATGCGGGGTCAGAGCTCCTG < 41bp 0.708905783638864 0.43706394059359 0.18738389 0.22696382 prediction 0.417811567277728 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139814794 chr9:139814796 synonymous SNV . 0 23 hm5C_associated_SNPs_90788 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139814792-139814817
64251 chr6 26598733 26598733 1 + C T LIHC 26598731 + 26598711 26598751 41 ACTGAGGGCCCGTAAAGCAGCACGGCCAGGGGGACGTGAAC ACTGAGGGCCCGTAAAGCAGCATGGCCAGGGGGACGTGAAC < 41bp 0.828158220178541 0.619263732902683 0.058998257 0.046748877 prediction 0.417788974551715 Functional Loss - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598731 chr6:26598733 nonsynonymous SNV 0.592 3 23 hm5C_associated_SNPs_90800 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr2 86718384 86718384 1 + G A UCEC 86718381 + 86718361 86718401 41 TGTCACAGACTCATACCAATCACGAAGATAAATTACAGGTA TGTCACAGACTCATACCAATCACAAAGATAAATTACAGGTA < 41bp 0.784887373173377 0.575993617655457 0.13187093 0.13259277 prediction 0.417787511035839 Functional Loss - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86718381 chr2:86718384 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_90801 0 0 7 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:86718357-86718384
64251 chr5 159854847 159854847 1 + C T STAD 159854845 + 159854825 159854865 41 GTTTCAGCTGGGCCCCCCTTCACCTGTGAAGATGCCCTCTC GTTTCAGCTGGGCCCCCCTTCATCTGTGAAGATGCCCTCTC < 41bp 0.860836474199148 0.651943167542277 0.3967957 0.42740744 prediction 0.417786613313742 Functional Loss - PTTG1 ENSG00000164611 CDS Human protein_coding chr5:159854845 chr5:159854847 nonsynonymous SNV 0.508 3 23 hm5C_associated_SNPs_90802 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:159854804-159854850
64251 chr3 122128637 122128637 1 + C T rs200828064 122128635 + 122128615 122128655 41 CTTGAACTTAGAAAAGAAAGCTCGTCTGAAAGAGGAAGCAG CTTGAACTTAGAAAAGAAAGCTTGTCTGAAAGAGGAAGCAG < 41bp 0.708890945259655 0.449793233103557 0.084382325 0.061729312 prediction 0.41778189051931 Functional Loss - FAM162A ENSG00000114023 CDS Human protein_coding chr3:122128635 chr3:122128637 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_90804 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:122128618-122128646
64251 chr14 65499367 65499367 1 + C T LIHC 65499364 + 65499344 65499384 41 GCCTCCGTAGCCTCGCTGACCAACATCATCACTCCAGACCT GCCTCCGTAGCCTCGCTGACCAATATCATCACTCCAGACCT < 41bp 0.708888207430081 0.489353115420516 0.039567977 0.052454114 prediction 0.417776414860162 Functional Loss - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65499364 chr14:65499367 synonymous SNV . 0 24 hm5C_associated_SNPs_90807 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr14:65499335-65499367
64251 chr6 158517224 158517224 1 + G A KIRC 158517221 + 158517201 158517241 41 GAGCTCAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAA GAGCTCAGACCCTTTGGACTCAGAAACCAGGAGCCCCAAAA < 41bp 0.742971722033213 0.534084552426184 0.8874794 0.7040893 prediction 0.417774339214059 Functional Loss - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158517221 chr6:158517224 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_90808 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:158517192-158517241
64251 chr22 49103590 49103590 1 + C T rs372988376 49103587 + 49103567 49103607 41 CCGTGTCTGGAGGGGGAAGGCTGCGACTTGTTAATCAACCG CCGTGTCTGGAGGGGGAAGGCTGTGACTTGTTAATCAACCG < 41bp 0.750913653165595 0.542026873976431 0.30968297 0.21372879 prediction 0.417773558378327 Functional Loss - FAM19A5 ENSG00000219438 CDS Human protein_coding chr22:49103587 chr22:49103590 synonymous SNV . 0 24 hm5C_associated_SNPs_90809 0 0 3 DDX3X POSTAR2 ENCODE chr22:49103548-49103637
64251 chr8 86163111 86163111 1 + C T OV 86163108 + 86163088 86163128 41 GACCCAAGCTCAGCTAAAATCATCAGCAACAGCGGCCATTC GACCCAAGCTCAGCTAAAATCATTAGCAACAGCGGCCATTC < 41bp 0.763893093217754 0.55501321346723 0.055648804 0.08268827 prediction 0.417759759501048 Functional Loss - CA13 ENSG00000185015 CDS Human protein_coding chr8:86163108 chr8:86163111 synonymous SNV . 0 24 hm5C_associated_SNPs_90814 0 0 1 GRWD1 POSTAR2 ENCODE chr8:86163020-86163160
64251 chr4 140283079 140283079 1 + G A UCEC 140283076 + 140283056 140283096 41 TTACAGATGAGAATAAAGAACACGAAGCTGATACAGGTATA TTACAGATGAGAATAAAGAACACAAAGCTGATACAGGTATA < 41bp 0.765473799952706 0.556594070834241 0.043605685 0.022586852 prediction 0.417759458236929 Functional Loss - NAA15 ENSG00000164134 CDS Human protein_coding chr4:140283076 chr4:140283079 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_90815 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:140283031-140283085
64251 chr5 179134154 179134154 1 + G A SKCM 179134151 + 179134131 179134171 41 AGGTGGATTTTATCCAAAGCCAAGAAAGACGATACCGATGA AGGTGGATTTTATCCAAAGCCAAAAAAGACGATACCGATGA < 41bp 0.76261277434854 0.55373513001792 0.2618365 0.14976707 prediction 0.417755288661241 Functional Loss - CANX ENSG00000127022 CDS Human protein_coding chr5:179134151 chr5:179134154 synonymous SNV . 0 24 hm5C_associated_SNPs_90818 0 0 22 SRSF1 POSTAR2 GSE83923,GSM2221668 chr5:179134120-179134160
64251 chr16 69373925 69373925 1 + C T BLCA 69373922 + 69373902 69373942 41 CCCTCAGCATTGGGGAGAATCTTCAACTGCTGGTGGACCGG CCCTCAGCATTGGGGAGAATCTTTAACTGCTGGTGGACCGG < 41bp 0.732553481472297 0.523680497390396 0.8912637 0.1851739 prediction 0.417745968163803 Functional Loss - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69373922 chr16:69373925 stopgain 0.463 1 24 hm5C_associated_SNPs_90820 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:69373910-69373936
64251 chr1 27117319 27117319 1 + G A UCEC 27117316 + 27117296 27117336 41 GTGGTGAAAGGATGTGGCCCCAGGACCCATCCCGGAAGGAG GTGGTGAAAGGATGTGGCCCCAGAACCCATCCCGGAAGGAG < 41bp 0.819801401218795 0.610939437355105 0.592967 0.37888813 prediction 0.417723927727378 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27117316 chr1:27117319 nonsynonymous SNV 0.989 2 24 hm5C_associated_SNPs_90826 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr1:27117301-27117330
64251 chr19 58115708 58115708 1 + G A BLCA 58115705 + 58115685 58115725 41 CCCAGGAGGAGTGGGAGCTCCTTGATGAGATGCAGAGGCTC CCCAGGAGGAGTGGGAGCTCCTTAATGAGATGCAGAGGCTC < 41bp 0.81671599844267 0.607862207588594 0.26604444 0.13287258 prediction 0.417707581708151 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58115705 chr19:58115708 nonsynonymous SNV 0.096 1 24 hm5C_associated_SNPs_90831 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:58115707-58115708
64251 chr19 50156784 50156784 1 + G A UCEC 50156781 + 50156761 50156801 41 GAGCAGCAGCCTGCTACCACCACGGCCACCAGCACTGCTGC GAGCAGCAGCCTGCTACCACCACAGCCACCAGCACTGCTGC < 41bp 0.708850630110752 0.463314673441268 0.8518303 0.33240396 prediction 0.417701260221504 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50156781 chr19:50156784 synonymous SNV . 0 24 hm5C_associated_SNPs_90835 0 0 3 BUD13 POSTAR2 ENCODE chr19:50156747-50156808
64251 chr22 39112796 39112796 1 + A T OV 39112792 + 39112772 39112812 41 CATGAAATTGAATCTGGTCGCACCAGCAGTGTGGGCAACGA CATGAAATTGAATCTGGTCGCACCTGCAGTGTGGGCAACGA < 41bp 0.70884477656895 0.362329577973158 0.11630687 0.03881359 prediction 0.417689553137899 Functional Loss - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112792 chr22:39112796 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_90836 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:39112772-39112813
64251 chr7 889594 889594 1 + G A DLBC 889591 + 889571 889611 41 AAGGGCAAGAGGCACCTCGACGCGCACACAGCCGCCCACTC AAGGGCAAGAGGCACCTCGACGCACACACAGCCGCCCACTC < 41bp 0.708842035892817 0.466889939222804 0.122465014 0.04856503 prediction 0.417684071785634 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:889591 chr7:889594 synonymous SNV . 0 24 hm5C_associated_SNPs_90837 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:889569-889607
64251 chr16 67876531 67876531 1 + C T UCEC 67876529 + 67876509 67876549 41 GACAAGGCGCTGCACTTCTACACGTTTCCAAAGGACGCTGA GACAAGGCGCTGCACTTCTACATGTTTCCAAAGGACGCTGA < 41bp 0.788253583299016 0.579416103463792 0.06893349 0.17563692 prediction 0.417674959670447 Functional Loss - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67876529 chr16:67876531 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_90839 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:67876479-67876547
64251 chr4 144435238 144435238 1 + C T rs200653868 144435236 + 144435216 144435256 41 TCTGCGGCCAGCGCTGGTCCCGCAGACGCCGAGATGGAGGT TCTGCGGCCAGCGCTGGTCCCGTAGACGCCGAGATGGAGGT < 41bp 0.769283088280756 0.560454281263188 0.4635076 0.4188352 prediction 0.417657614035137 Functional Loss - SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144435236 chr4:144435238 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_90846 0 0 6 FMR1 POSTAR2 ENCODE chr4:144435162-144435256
64251 chr19 1925738 1925738 1 + G A rs113233543 1925735 + 1925715 1925755 41 GTACGGAATGCCGCTGGGTGCCCGGAGGCGGCCATGGTGTC GTACGGAATGCCGCTGGGTGCCCAGAGGCGGCCATGGTGTC < 41bp 0.708826406050842 0.492194763985371 0.26095527 0.041992456 prediction 0.417652812101684 Functional Loss - SCAMP4 ENSG00000198683 ncRNA_exonic Human other chr19:1925735 chr19:1925738 . . 0 24 hm5C_associated_SNPs_90848 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1925618-1925824
64251 chr1 219347247 219347247 1 + G C LUAD 219347243 + 219347223 219347263 41 GGCATCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTGCAGC GGCATCAGCGATGGCGGCTGCGTCCGGGTCGGTTCTGCAGC < 41bp 0.859916458550753 0.651091474525841 0.31773064 0.268771 prediction 0.417649968049825 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219347243 chr1:219347247 synonymous SNV . 0 25 hm5C_associated_SNPs_90850 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:219347228-219347260
64251 chr16 2546476 2546476 1 + C T STAD 2546474 + 2546454 2546494 41 CCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCCGTGCGC CCAGCTACTGCCTGAATGCACGTGGCGAGGGGGCCGTGCGC < 41bp 0.833285302161758 0.624463950275245 0.5886044 0.69801193 prediction 0.417642703773027 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546474 chr16:2546476 synonymous SNV . 0 23 hm5C_associated_SNPs_90852 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2546467-2546497
64251 chr6 147648398 147648398 1 + G A STAD 147648395 + 147648375 147648415 41 ACCCCGATCTCCTCGTAAATCTCGACAGCCTTCAGGAGGTA ACCCCGATCTCCTCGTAAATCTCAACAGCCTTCAGGAGGTA < 41bp 0.778917624002943 0.570097282427823 0.79900587 0.69904923 prediction 0.417640683150239 Functional Loss - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147648395 chr6:147648398 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90853 0 0 1 FMR1 POSTAR2 ENCODE chr6:147648364-147648412
64251 chr1 230371806 230371806 1 + G T LUAD 230371802 + 230371782 230371822 41 GTGGATCTGCCGGCCACCAGCGTGGTGATCACGTTTCACAA GTGGATCTGCCGGCCACCAGCGTGTTGATCACGTTTCACAA < 41bp 0.708819938956867 0.496308920184039 0.8738197 0.29961753 prediction 0.417639877913735 Functional Loss - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230371802 chr1:230371806 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_90854 0 0 6 BUD13 POSTAR2 ENCODE chr1:230371767-230371828
64251 chr22 39413824 39413824 1 + C T LUAD 39413821 + 39413801 39413841 41 AGGTGCTTCCTCTCTTGGTTCTGCGACGACATACTGTCTCC AGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCC < 41bp 0.723112232663221 0.514293425611586 0.18876219 0.21979386 prediction 0.41763761410327 Functional Loss - APOBEC3C ENSG00000244509 CDS Human protein_coding chr22:39413821 chr22:39413824 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_90855 0 0 4 RPS3 POSTAR2 ENCODE chr22:39413818-39413843
64251 chr1 11733700 11733700 1 + G A UCEC 11733697 + 11733677 11733717 41 CTACACCTTCTCAGACTACCCCCGGGGTGTCCGCTACATCC CTACACCTTCTCAGACTACCCCCAGGGTGTCCGCTACATCC < 41bp 0.7088187705293 0.472838554640347 0.27285865 0.059298217 prediction 0.4176375410586 Functional Loss - FBXO6 ENSG00000116663 CDS Human protein_coding chr1:11733697 chr1:11733700 nonsynonymous SNV 0.473 2 24 hm5C_associated_SNPs_90856 0 0 3 SND1 POSTAR2 ENCODE chr1:11733671-11733791
64251 chr7 106547469 106547469 1 + G C rs10216210 106547465 + 106547445 106547485 41 AGTCCCAGGTACTCAGGAGGCTGAGGCAGGAGGATTGCCTG AGTCCCAGGTACTCAGGAGGCTGACGCAGGAGGATTGCCTG < 41bp 0.769694571710764 0.560878210351146 0.9333389 0.9200184 prediction 0.417632722719235 Functional Loss - PIK3CG ENSG00000105851 UTR3 Human protein_coding chr7:106547465 chr7:106547469 . . 0 25 hm5C_associated_SNPs_90857 0 0 1 FAM120A POSTAR2 ENCODE chr7:106547442-106547506
64251 chrX 102942348 102942348 1 + G C rs183588287 102942344 + 102942324 102942364 41 CTCGCGTGGTGCTGGGGTTGCTGTGTGAGCGGCCCTCGTGG CTCGCGTGGTGCTGGGGTTGCTGTCTGAGCGGCCCTCGTGG < 41bp 0.87486442128089 0.666048218894175 0.41711602 0.38163942 prediction 0.41763240477343 Functional Loss - MORF4L2-AS1 ENSG00000231154 ncRNA_exonic Human antisense chrX:102942344 chrX:102942348 . . 0 25 hm5C_associated_SNPs_90858 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:102942322-102942361
64251 chr19 17628573 17628573 1 + C T UCEC 17628570 + 17628550 17628590 41 ACTCCCCGAAGCCACCGCCACAGCGTGTGACCCTCACACTA ACTCCCCGAAGCCACCGCCACAGTGTGTGACCCTCACACTA < 41bp 0.723315407649138 0.514500237272538 0.38109806 0.32838002 prediction 0.4176303407532 Functional Loss - PGLS ENSG00000130313 CDS Human protein_coding chr19:17628570 chr19:17628573 nonsynonymous SNV 0.248 4 24 hm5C_associated_SNPs_90860 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr19:17628530-17628576
64251 chrX 84510624 84510624 1 + G T UCEC 84510621 + 84510601 84510641 41 GACACTTAGAACATGTGGTCCAAGATTGTGTTTCAGGAGTC GACACTTAGAACATGTGGTCCAATATTGTGTTTCAGGAGTC < 41bp 0.708814183223058 0.328485093102076 0.04518631 0.02191928 prediction 0.417628366446116 Functional Loss - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84510621 chrX:84510624 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90862 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:84510276-84510802
64251 chr9 116041256 116041256 1 + C T STAD 116041253 + 116041233 116041273 41 TTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGT TTTGAAATTGAAGAGCATATCAGTGAGCGACAGGCAGAAGT < 41bp 0.75791534595258 0.549102896420079 0.5662235 0.4188673 prediction 0.417624899065001 Functional Loss - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116041253 chr9:116041256 synonymous SNV . 0 24 hm5C_associated_SNPs_90865 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:116041236-116041261
64251 chr8 126448585 126448585 1 + G A UCEC 126448582 + 126448562 126448602 41 CCTCCGAGAGACTCACTGCCCCCGAGATCCTACTGCACCCC CCTCCGAGAGACTCACTGCCCCCAAGATCCTACTGCACCCC < 41bp 0.798927368313268 0.590116354075901 0.115519494 0.04020834 prediction 0.417622028474735 Functional Loss - TRIB1 ENSG00000173334 CDS Human protein_coding chr8:126448582 chr8:126448585 nonsynonymous SNV 0.428 2 24 hm5C_associated_SNPs_90867 0 0 1 RBM15 POSTAR2 ENCODE chr8:126448503-126448585
64251 chr22 50320944 50320944 1 + G A LUAD 50320941 + 50320921 50320961 41 GCCCGACACAGCTGCCCTCCCGCGAAGACCTGTAATGTGCC GCCCGACACAGCTGCCCTCCCGCAAAGACCTGTAATGTGCC < 41bp 0.804260657430475 0.595458534135229 0.113360345 0.026688248 prediction 0.417604246590493 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50320941 chr22:50320944 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_90873 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr22:50320915-50320944
64251 chr16 58296316 58296316 1 + G A UCEC 58296313 + 58296293 58296333 41 AAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAG AAGAGGTGAGTGAGGCCCTTCACAATGTTGATTTTCAGCAG < 41bp 0.804126213609432 0.595324276634821 0.4566411 0.4443072 prediction 0.41760387394922 Functional Loss - CCDC113 ENSG00000103021 CDS Human protein_coding chr16:58296313 chr16:58296316 nonsynonymous SNV 0.857 1 24 hm5C_associated_SNPs_90874 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:58296290-58296319
64251 chr16 84691044 84691044 1 + C T rs3751762 84691041 + 84691021 84691061 41 AGCGGGAGTGTGAGCACGACCTCCTGCAGGCCGCCCTGCAG AGCGGGAGTGTGAGCACGACCTCTTGCAGGCCGCCCTGCAG < 41bp 0.732177604250839 0.523375789335636 0.2518528 0.14848363 prediction 0.417603629830406 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84691041 chr16:84691044 synonymous SNV . 0 24 hm5C_associated_SNPs_90875 0 0 1 YBX3 POSTAR2 ENCODE chr16:84690972-84691067
64251 chr5 36686198 36686198 1 + G A LIHC 36686195 + 36686175 36686215 41 TCCGGACCACCACCAACGTACTGGGAGACTCCCTGGGAGCT TCCGGACCACCACCAACGTACTGAGAGACTCCCTGGGAGCT < 41bp 0.708801782249604 0.470324914336881 0.86851966 0.39652038 prediction 0.417603564499209 Functional Loss - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36686195 chr5:36686198 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90876 0 0 3 FUS POSTAR2 GSE40653,GSM998875 chr5:36686180-36686200
64251 chr3 127783785 127783785 1 - C T COAD 127783788 - 127783768 127783808 41 GTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTG GTAGAACGCCTCCCGAAGGGCTCAGACCTTGTCTGTGCGTG < 41bp 0.772731533470503 0.563944125473722 0.15660653 0.14640331 prediction 0.417574815993563 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127783788 chr3:127783785 stopgain 0.988 1 24 hm5C_associated_SNPs_90884 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:127783777-127783804
64251 chr3 53894223 53894223 1 + T C UCEC 53894222 + 53894202 53894242 41 TGCTGGTGGCCACATGGGTGCTGGTGGCAGGGATCTATCTA TGCTGGTGGCCACATGGGTGCCGGTGGCAGGGATCTATCTA < 41bp 0.708787113459823 0.465889675895177 0.40461528 0.6149496 prediction 0.417574226919646 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53894222 chr3:53894223 nonsynonymous SNV 0.162 3 22 hm5C_associated_SNPs_90886 0 0 5 GRWD1 POSTAR2 ENCODE chr3:53894192-53894247
64251 chr6 4937824 4937824 1 + T C SKCM 4937823 + 4937803 4937843 41 TGAGAGAAGTCCAGAGTGCTCTGAGCACGGCCGCTGCCGAT TGAGAGAAGTCCAGAGTGCTCCGAGCACGGCCGCTGCCGAT < 41bp 0.803208593079299 0.594423506060223 0.47791207 0.8037622 prediction 0.417570174038152 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4937823 chr6:4937824 nonsynonymous SNV 0.938 4 22 hm5C_associated_SNPs_90888 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:4937801-4937827
64251 chrX 129148208 129148208 1 + A C LUSC 129148204 + 129148184 129148224 41 CTGTCCTGCCGTCCTACCTGCAGGACAGGTGTCTCCCAGGC CTGTCCTGCCGTCCTACCTGCAGGCCAGGTGTCTCCCAGGC < 41bp 0.708783449990509 0.300410930478085 0.5759991 0.46709165 prediction 0.417566899981018 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148204 chrX:129148208 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_90889 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chrX:129148194-129148214
64251 chr20 25656702 25656702 1 - C A BLCA 25656706 - 25656686 25656726 41 GGGGAGAAGCCTTTTGTGTGCAAGGATTGTGAGCGAAGCTT GGGGAGAAGCCTTTTGTGTGCAAGTATTGTGAGCGAAGCTT < 41bp 0.715120673455714 0.506338991236313 0.07691103 0.027757734 prediction 0.417563364438802 Functional Loss - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656706 chr20:25656702 nonsynonymous SNV 0.008 1 25 hm5C_associated_SNPs_90892 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:25656679-25656713
64251 chr18 2599125 2599125 1 + C T UCEC 2599123 + 2599103 2599143 41 ACTTTGAAATTAAGTTTAATCCCGAGGCTGGTGCCAACTGC ACTTTGAAATTAAGTTTAATCCTGAGGCTGGTGCCAACTGC < 41bp 0.87184284029985 0.663066211809272 0.16424334 0.10185915 prediction 0.417553256981157 Functional Loss - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2599123 chr18:2599125 synonymous SNV . 0 23 hm5C_associated_SNPs_90898 0 0 2 UCHL5 POSTAR2 ENCODE chr18:2599119-2599151
64251 chr2 234072469 234072469 1 + G A COAD 234072466 + 234072446 234072486 41 ACATTTACGTGATCGGCACCCAAGAGGACCCCCTGAGTGAG ACATTTACGTGATCGGCACCCAAAAGGACCCCCTGAGTGAG < 41bp 0.807971959396856 0.599197556977457 0.25629395 0.053518474 prediction 0.417548804838799 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234072466 chr2:234072469 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90904 0 0 3 GRWD1 POSTAR2 ENCODE chr2:234072441-234072501
64251 chr1 36769447 36769447 1 + G A COAD 36769444 + 36769424 36769464 41 GACAAGTGGGTGAGCCGGGGCCGGGGCCGAGGAGCCTTTCC GACAAGTGGGTGAGCCGGGGCCGAGGCCGAGGAGCCTTTCC < 41bp 0.801814077463216 0.5930397465668 0.9225086 0.90030295 prediction 0.417548661792833 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36769444 chr1:36769447 synonymous SNV . 0 24 hm5C_associated_SNPs_90905 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:36769397-36769458
64251 chr6 20402686 20402686 1 + C T SKCM 20402683 + 20402663 20402703 41 CCACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCC CCACCTCCTGTTCCTCCTCCCTCTAAAGCGGCGCCGTAGCC < 41bp 0.746080249635892 0.537318354044075 0.9643624 0.9279882 prediction 0.417523791183632 Functional Loss - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402683 chr6:20402686 stopgain 0.970 0 24 hm5C_associated_SNPs_90913 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:20402631-20402689
64251 chr20 1106213 1106213 1 + C T UCEC 1106210 + 1106190 1106230 41 ACAATAAAGACCTGTATGTCCTCCGGTATGAGTATAAGGAT ACAATAAAGACCTGTATGTCCTCTGGTATGAGTATAAGGAT < 41bp 0.708760586316176 0.469527825611906 0.095507294 0.08193886 prediction 0.417521172632351 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1106210 chr20:1106213 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_90914 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:1106178-1106259
64251 chr11 93493015 93493015 1 + C T rs186645027 93493012 + 93492992 93493032 41 GTTTGTCTACCAGTTTTTGTCTCCAGAGACCCAGTAAGTCT GTTTGTCTACCAGTTTTTGTCTCTAGAGACCCAGTAAGTCT < 41bp 0.781689020352366 0.572935894286578 0.9566487 0.92728424 prediction 0.417506252131576 Functional Loss - C11orf54 ENSG00000182919 CDS Human protein_coding chr11:93493012 chr11:93493015 synonymous SNV . 0 24 hm5C_associated_SNPs_90920 0 0 2 PPIG POSTAR2 ENCODE chr11:93492966-93493033
64251 chr16 56976088 56976088 1 + A C CESC 56976084 + 56976064 56976104 41 CATTTAGACCGAGGCCGGTTCAGAACTTCCCAAATGATGGT CATTTAGACCGAGGCCGGTTCAGACCTTCCCAAATGATGGT < 41bp 0.708745622994617 0.289980013586615 0.108045965 0.06345832 prediction 0.417491245989234 Functional Loss - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56976084 chr16:56976088 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_90924 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:56976064-56976094
64251 chr10 38654457 38654457 1 + C T HNSC 38654455 + 38654435 38654475 41 CAAGGAAATCTAATTTCAGCCTCGAGGACTTCCAGCACAGC CAAGGAAATCTAATTTCAGCCTTGAGGACTTCCAGCACAGC < 41bp 0.70874403271023 0.432390551057197 0.08400795 0.02071035 prediction 0.417488065420459 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654455 chr10:38654457 . . 0 23 hm5C_associated_SNPs_90925 0 0 1 GRWD1 POSTAR2 ENCODE chr10:38654399-38654460
64251 chr10 38654458 38654458 1 + G T LUAD 38654455 + 38654435 38654475 41 CAAGGAAATCTAATTTCAGCCTCGAGGACTTCCAGCACAGC CAAGGAAATCTAATTTCAGCCTCTAGGACTTCCAGCACAGC < 41bp 0.70874403271023 0.342293834968 0.08400795 0.3527264 prediction 0.417488065420459 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654455 chr10:38654458 . . 0 24 hm5C_associated_SNPs_90926 0 0 1 GRWD1 POSTAR2 ENCODE chr10:38654399-38654460
64251 chr10 38654459 38654459 1 + A C LUSC 38654455 + 38654435 38654475 41 CAAGGAAATCTAATTTCAGCCTCGAGGACTTCCAGCACAGC CAAGGAAATCTAATTTCAGCCTCGCGGACTTCCAGCACAGC < 41bp 0.70874403271023 0.301553544602158 0.08400795 0.013581723 prediction 0.417488065420459 Functional Loss - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38654455 chr10:38654459 . . 0 25 hm5C_associated_SNPs_90927 0 0 1 GRWD1 POSTAR2 ENCODE chr10:38654399-38654460
64251 chr12 53581356 53581356 1 + C T COAD 53581353 + 53581333 53581373 41 GGGTGCCAGTCCAAGACTTCCGACGGGCAGTTTTCTCTATA GGGTGCCAGTCCAAGACTTCCGATGGGCAGTTTTCTCTATA < 41bp 0.71294383147954 0.504201969797649 0.10238579 0.08365086 prediction 0.417483723363782 Functional Loss - ZNF740 ENSG00000139651 CDS Human protein_coding chr12:53581353 chr12:53581356 synonymous SNV . 0 24 hm5C_associated_SNPs_90930 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:53581293-53581378
64251 chr8 144682311 144682311 1 + G C rs3210186 144682307 + 144682287 144682327 41 TGTGTTCCTGCTCTGGCCCCCGTGGGGCTGGGCCTCCGCCC TGTGTTCCTGCTCTGGCCCCCGTGCGGCTGGGCCTCCGCCC < 41bp 0.825857666524239 0.617115865755192 0.8782183 0.6337483 prediction 0.417483601538093 Functional Loss - TIGD5 ENSG00000179886 UTR3 Human protein_coding chr8:144682307 chr8:144682311 . . 0 25 hm5C_associated_SNPs_90931 0 1 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:144682290-144682329
64251 chr19 11098481 11098481 1 + C T HNSC 11098479 + 11098459 11098499 41 TGCCACCGCAGACCCAGTCCCCCGGGCAGCCGGCCCAGCCC TGCCACCGCAGACCCAGTCCCCTGGGCAGCCGGCCCAGCCC < 41bp 0.708739240048826 0.469455510665864 0.42701116 0.3551982 prediction 0.417478480097652 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11098479 chr19:11098481 synonymous SNV . 0 23 hm5C_associated_SNPs_90935 1 0 5 DDX55 POSTAR2 ENCODE chr19:11098471-11098528
64251 chr3 127786871 127786871 1 + C T UCEC 127786868 + 127786848 127786888 41 AGCAGATGGTGATGAGAGGCCACCGAGAGACCTCCATGGTC AGCAGATGGTGATGAGAGGCCACTGAGAGACCTCCATGGTC < 41bp 0.761830851646223 0.553092571960103 0.32916868 0.27616352 prediction 0.417476559372238 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127786868 chr3:127786871 stopgain 0.952 1 24 hm5C_associated_SNPs_90936 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:127786852-127786874
64251 chr16 22019662 22019662 1 + G A UCEC 22019659 + 22019639 22019679 41 TCATCTCAGGATGTCTCTTTCTGGCCGCCGATATCTTCGCC TCATCTCAGGATGTCTCTTTCTGACCGCCGATATCTTCGCC < 41bp 0.799590240448308 0.590853682997972 0.89968383 0.70059675 prediction 0.417473114900673 Functional Loss - C16orf52 ENSG00000185716 CDS Human protein_coding chr16:22019659 chr16:22019662 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_90938 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:22019660-22019680
64251 chr2 159314128 159314128 1 + G C rs1549085 159314127 + 159314107 159314147 41 GCTTCCCCGCTGCCTGCCGCCGCGCGCCCCAAGTCGCCCTC GCTTCCCCGCTGCCTGCCGCCCCGCGCCCCAAGTCGCCCTC < 41bp 0.708736098522365 0.40819221792088 0.75669587 0.21464914 prediction 0.417472197044731 Functional Loss - PKP4 ENSG00000144283 UTR5 Human protein_coding chr2:159314127 chr2:159314128 . . 0 22 hm5C_associated_SNPs_90939 0 0 8 GEMIN5 POSTAR2 ENCODE chr2:159314076-159314136
64251 chr16 231010 231010 1 + C T PAAD 231008 + 230988 231028 41 CACTGCCTGCTGGTAACCCTCGCCCGGCACTACCCCGGAGA CACTGCCTGCTGGTAACCCTCGTCCGGCACTACCCCGGAGA < 41bp 0.708729296995235 0.469664482782948 0.5041526 0.7213505 prediction 0.417458593990469 Functional Loss - HBQ1 ENSG00000086506 CDS Human protein_coding chr16:231008 chr16:231010 nonsynonymous SNV 0.578 5 23 hm5C_associated_SNPs_90940 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:230986-231041
64251 chr1 55523034 55523034 1 + G T SARC 55523031 + 55523011 55523051 41 CAGTTGGGGCCACCAATGCCCAAGACCAGCCGGTGACCCTG CAGTTGGGGCCACCAATGCCCAATACCAGCCGGTGACCCTG < 41bp 0.708728614599424 0.302346440746257 0.16788173 0.044006974 prediction 0.417457229198849 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55523031 chr1:55523034 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_90941 0 0 2 BUD13 POSTAR2 ENCODE chr1:55522956-55523057
64251 chr6 16141881 16141881 1 + G C GBM 16141877 + 16141857 16141897 41 CATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGG CATATCTTTTTCTTGCACATCAAGCAGGCCCTCTTGGCAGG < 41bp 0.708724506655208 0.410838835114953 0.40229502 0.05280605 prediction 0.417449013310415 Functional Loss - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16141877 chr6:16141881 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_90943 0 0 5 BUD13 POSTAR2 ENCODE chr6:16141859-16141932
64251 chr3 47324584 47324584 1 + G T UCEC 47324581 + 47324561 47324601 41 AAGCTGTGCGACGTGACCCTCAAGGTACCGCGGACTGGGCG AAGCTGTGCGACGTGACCCTCAATGTACCGCGGACTGGGCG < 41bp 0.708722994766574 0.316670485112919 0.90346277 0.65215635 prediction 0.417445989533149 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47324581 chr3:47324584 nonsynonymous SNV 0.927 1 24 hm5C_associated_SNPs_90945 0 0 4 GRWD1 POSTAR2 ENCODE chr3:47324451-47324597
64251 chr15 78458576 78458576 1 + C T SKCM 78458573 + 78458553 78458593 41 TCAGTGCCGTGATGATGCTGCGCCACATGGGACTTTTTGAC TCAGTGCCGTGATGATGCTGCGCTACATGGGACTTTTTGAC < 41bp 0.778288341024819 0.569568744287602 0.050857246 0.083251595 prediction 0.417439193474434 Functional Loss - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78458573 chr15:78458576 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_90948 0 0 4 YTHDC2 POSTAR2 GSE98085,GSM2712721 chr15:78458560-78458580
64251 chr1 94946071 94946071 1 + C T GBM 94946069 + 94946049 94946089 41 TGTTTCTGGGCTATTCCTAACTCGACTTCGAAGACCCATTG TGTTTCTGGGCTATTCCTAACTTGACTTCGAAGACCCATTG < 41bp 0.854250559460683 0.645532853766894 0.24297735 0.07302487 prediction 0.417435411387577 Functional Loss - ABCD3 ENSG00000117528 CDS Human protein_coding chr1:94946069 chr1:94946071 stopgain 1.000 1 23 hm5C_associated_SNPs_90949 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:94946040-94946080
64251 chrX 65393540 65393540 1 + C T UCEC 65393537 + 65393517 65393557 41 ATTCCAGAAGGCCATGCACCCACCGATGCTGACCCAGCGTG ATTCCAGAAGGCCATGCACCCACTGATGCTGACCCAGCGTG < 41bp 0.756917357666429 0.548200337465889 0.105172634 0.17673182 prediction 0.417434040401081 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65393537 chrX:65393540 synonymous SNV . 0 24 hm5C_associated_SNPs_90951 0 0 6 BUD13 POSTAR2 ENCODE chrX:65393503-65393564
64251 chr16 30780226 30780226 1 + C T UCEC 30780224 + 30780204 30780244 41 CGAAGGGAGAGCAAGAAGATCGCGGATGAGGATGCCCTGCG CGAAGGGAGAGCAAGAAGATCGTGGATGAGGATGCCCTGCG < 41bp 0.841192841138098 0.632476260404784 0.8817723 0.8907387 prediction 0.417433161466629 Functional Loss - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30780224 chr16:30780226 nonsynonymous SNV 0.916 4 23 hm5C_associated_SNPs_90952 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350200 chr16:30780215-30780243
64251 chr15 69740273 69740273 1 + T C rs117120578 69740272 + 69740252 69740292 41 TTGAAAATCACGGACCTCAGCTACATCATACACTGACCCAG TTGAAAATCACGGACCTCAGCCACATCATACACTGACCCAG < 41bp 0.770327081168912 0.561610507864356 0.05926156 0.011494666 prediction 0.417433146609112 Functional Loss - KIF23 ENSG00000137807 UTR3 Human protein_coding chr15:69740272 chr15:69740273 . . 0 22 hm5C_associated_SNPs_90953 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:69740138-69740295
64251 chr5 140041532 140041532 1 + G A UCEC 140041529 + 140041509 140041549 41 ATGTCTGAAGGGCGGAAAACCAGGCGCTTCAAGGAAACCAA ATGTCTGAAGGGCGGAAAACCAGACGCTTCAAGGAAACCAA < 41bp 0.807276504824344 0.598562754559864 0.8942408 0.32472014 prediction 0.41742750052896 Functional Loss - IK ENSG00000113141 CDS Human protein_coding chr5:140041529 chr5:140041532 synonymous SNV . 0 24 hm5C_associated_SNPs_90954 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:140041530-140041551
64251 chr22 29885473 29885473 1 + C T rs5763269 29885470 + 29885450 29885490 41 AGTGAAGGAAGAAGCAAAGTCACCGGCTGAGGCCAAGTCCC AGTGAAGGAAGAAGCAAAGTCACTGGCTGAGGCCAAGTCCC < 41bp 0.726295747074267 0.517585266050727 0.052139252 0.044595987 prediction 0.417420962047081 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885470 chr22:29885473 nonsynonymous SNV 0.002 3 24 hm5C_associated_SNPs_90958 1 0 1 UCHL5 POSTAR2 ENCODE chr22:29885420-29885477
64251 chr5 14280513 14280513 1 + G A SKCM 14280510 + 14280490 14280530 41 AGAATACGACAGGAGGATCTCAGGAGACTCATTTCCTATCT AGAATACGACAGGAGGATCTCAGAAGACTCATTTCCTATCT < 41bp 0.758462134708386 0.549752457608104 0.94120944 0.8905134 prediction 0.417419354200564 Functional Loss - TRIO ENSG00000038382 CDS Human protein_coding chr5:14280510 chr5:14280513 synonymous SNV . 0 24 hm5C_associated_SNPs_90959 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:14280497-14280540
64251 chr1 44303982 44303982 1 + C T SKCM 44303980 + 44303960 44304000 41 CTTGATGACGGCCATCTTCCCCCGGTAAGTGCTCCTGTTTC CTTGATGACGGCCATCTTCCCCTGGTAAGTGCTCCTGTTTC < 41bp 0.768509103396894 0.559799743059542 0.23117194 0.16851842 prediction 0.417418720674704 Functional Loss - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44303980 chr1:44303982 stopgain 0.997 3 23 hm5C_associated_SNPs_90960 0 0 1 PPIG POSTAR2 ENCODE chr1:44303915-44303985
64251 chr16 31049930 31049930 1 + G A CESC 31049927 + 31049907 31049947 41 AACGCAGTATTCGTGAGCTGCACGACATATTCACTTTTCTG AACGCAGTATTCGTGAGCTGCACAACATATTCACTTTTCTG < 41bp 0.708708761280338 0.465103861002757 0.08421293 0.05640325 prediction 0.417417522560676 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31049927 chr16:31049930 nonsynonymous SNV 0.703 0 24 hm5C_associated_SNPs_90962 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:31049926-31049952
64251 chr16 31049929 31049929 1 + C T STAD 31049927 + 31049907 31049947 41 AACGCAGTATTCGTGAGCTGCACGACATATTCACTTTTCTG AACGCAGTATTCGTGAGCTGCATGACATATTCACTTTTCTG < 41bp 0.708708761280338 0.428335225581781 0.08421293 0.19287592 prediction 0.417417522560676 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31049927 chr16:31049929 synonymous SNV . 0 23 hm5C_associated_SNPs_90963 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:31049926-31049952
64251 chr19 42794926 42794926 1 + C T COAD 42794924 + 42794904 42794944 41 GCTCCCCTGTCCCGTCCTGCCGCCACCATGGTCACCAATGT GCTCCCCTGTCCCGTCCTGCCGTCACCATGGTCACCAATGT < 41bp 0.708706461774108 0.43891402847336 0.2644893 0.17887425 prediction 0.417412923548216 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42794924 chr19:42794926 nonsynonymous SNV 0.984 2 23 hm5C_associated_SNPs_90966 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:42794905-42794926
64251 chr11 397003 397003 1 + G A rs200400175 397000 + 396980 397020 41 GGCCCGTGTCCTTCCATGAGCGCGGTGGGGTTGGGAGCCGG GGCCCGTGTCCTTCCATGAGCGCAGTGGGGTTGGGAGCCGG < 41bp 0.825135926891132 0.616439114866682 0.48822752 0.3002228 prediction 0.4173936240489 Functional Loss - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397000 chr11:397003 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_90976 0 0 2 FMR1 POSTAR2 ENCODE chr11:396939-397018
64251 chr3 9804648 9804648 1 - C T SKCM 9804651 - 9804631 9804671 41 GCCGCCTCATCTTCCAGGTGCTGGATGCTGTGAAATACCTG GCCGCCTCATCTTCCAGGTGCTGAATGCTGTGAAATACCTG < 41bp 0.708695181129624 0.455636590863296 0.53253615 0.44867426 prediction 0.417390362259249 Functional Loss - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9804651 chr3:9804648 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_90978 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9804612-9804650
64251 chr17 7324917 7324917 1 + G A SKCM 7324914 + 7324894 7324934 41 TTGGGTGTACCGTTCCCTAACTGGGAGGTGACTGGAAAAAA TTGGGTGTACCGTTCCCTAACTGAGAGGTGACTGGAAAAAA < 41bp 0.809632225766179 0.600942490580868 0.6351161 0.21060833 prediction 0.417379470370622 Functional Loss - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324914 chr17:7324917 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_90981 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7324892-7324929
64251 chr17 73227713 73227713 1 + G A UCEC 73227710 + 73227690 73227730 41 TTCCTCCTGCTGGAGTACGCCTCGGGACTGTTTGCTCATCC TTCCTCCTGCTGGAGTACGCCTCAGGACTGTTTGCTCATCC < 41bp 0.807595078919925 0.598906582292943 0.031040251 0.012931436 prediction 0.417376993253963 Functional Loss - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73227710 chr17:73227713 synonymous SNV . 0 24 hm5C_associated_SNPs_90983 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73227681-73227717
64251 chr14 31349683 31349683 1 + G A BLCA 31349680 + 31349660 31349700 41 AAACGACTAAAGAAAACACCCGAGAAGAAAACTGGCAATAA AAACGACTAAAGAAAACACCCGAAAAGAAAACTGGCAATAA < 41bp 0.771767771408409 0.563079865032945 0.3325076 0.24191657 prediction 0.417375812750927 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31349680 chr14:31349683 synonymous SNV . 0 24 hm5C_associated_SNPs_90984 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:31349655-31349693
64251 chr1 95710036 95710036 1 + G A UCEC 95710033 + 95710013 95710053 41 TCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGT TCAGGCATATCCTCAGCCAACCAAAAACTGGCAGTGGCAGT < 41bp 0.785693717052537 0.577006344119244 0.2994498 0.25605184 prediction 0.417374745866586 Functional Loss - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95710033 chr1:95710036 nonsynonymous SNV 0.007 1 24 hm5C_associated_SNPs_90986 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:95710008-95710036
64251 chr11 20483623 20483623 1 + G T UCEC 20483620 + 20483600 20483640 41 TGGGATGATGTCTATGGCTTCAAGATGTCCTGCATGAAGAA TGGGATGATGTCTATGGCTTCAATATGTCCTGCATGAAGAA < 41bp 0.708686415725457 0.325862264678412 0.27142665 0.14384064 prediction 0.417372831450914 Functional Loss - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20483620 chr11:20483623 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_90988 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:20483594-20483623
64251 chr1 112999663 112999663 1 + G T CHOL 112999660 + 112999640 112999680 41 TCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTC TCTCCAGATTCACTAGCCAACAATGGCCAATCAAGCCAGTC < 41bp 0.708686038332292 0.323072141038654 0.09821054 0.019749254 prediction 0.417372076664585 Functional Loss - CTTNBP2NL ENSG00000143079 CDS Human protein_coding chr1:112999660 chr1:112999663 nonsynonymous SNV 0.943 3 24 hm5C_associated_SNPs_90989 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:112999646-112999670
64251 chr1 162762630 162762630 1 + G T SARC 162762626 + 162762606 162762646 41 AGCAACCTGCAGTCGGTCTTCCGGGCCTCCAAGGAACTTAA AGCAACCTGCAGTCGGTCTTCCGGTCCTCCAAGGAACTTAA < 41bp 0.720674000627574 0.511988457780418 0.88437057 0.3909742 prediction 0.417371085694312 Functional Loss - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162762626 chr1:162762630 nonsynonymous SNV 0.006 5 25 hm5C_associated_SNPs_90990 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:162762607-162762638
64251 chr9 133748350 133748350 1 + C T UCEC 133748347 + 133748327 133748367 41 TGCAACCGGCAGGAGGTGAACGCCGTGGTGCTGCTGTACAT TGCAACCGGCAGGAGGTGAACGCTGTGGTGCTGCTGTACAT < 41bp 0.765651030082598 0.556969179468078 0.29345 0.29681885 prediction 0.417363701229039 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133748347 chr9:133748350 synonymous SNV . 0 24 hm5C_associated_SNPs_90991 0 0 11 DDX24 POSTAR2 ENCODE chr9:133748263-133748374
64251 chr12 113873225 113873225 1 + C T SKCM 113873222 + 113873202 113873242 41 TGGCAGTTGGGGGTGGGGGTCTCCTGGCCGGGGTGGTGGCT TGGCAGTTGGGGGTGGGGGTCTCTTGGCCGGGGTGGTGGCT < 41bp 0.70868106975707 0.489066382071829 0.8871275 0.8961016 prediction 0.41736213951414 Functional Loss - SDSL ENSG00000139410 CDS Human protein_coding chr12:113873222 chr12:113873225 synonymous SNV . 0 24 hm5C_associated_SNPs_90994 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:113873207-113873231
64251 chr1 206566189 206566189 1 + G A UCEC 206566186 + 206566166 206566206 41 ACCCCACGCTCCCCTGACTCCACGGCCAACGTTCGCATTGA ACCCCACGCTCCCCTGACTCCACAGCCAACGTTCGCATTGA < 41bp 0.813391881969202 0.604711646903478 0.9068954 0.60291415 prediction 0.417360470131448 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566186 chr1:206566189 synonymous SNV . 0 24 hm5C_associated_SNPs_90996 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206566170-206566192
64251 chr3 47385056 47385056 1 + C T READ 47385053 + 47385033 47385073 41 TCCCCACTGCAGGTGGAACACTACAACCACCACACAGCCAC TCCCCACTGCAGGTGGAACACTATAACCACCACACAGCCAC < 41bp 0.746088844885303 0.537409019817413 0.9319978 0.73868114 prediction 0.41735965013578 Functional Loss - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385053 chr3:47385056 synonymous SNV . 0 24 hm5C_associated_SNPs_90997 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:47385048-47385084
64251 chr19 42796844 42796844 1 + C T COAD 42796841 + 42796821 42796861 41 AGCATTTTACTCTGGCAGCCCTGCACCCACCTCCTCAGCAC AGCATTTTACTCTGGCAGCCCTGTACCCACCTCCTCAGCAC < 41bp 0.709706319782918 0.501034621671437 0.27603093 0.25458908 prediction 0.417343396222962 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42796841 chr19:42796844 nonsynonymous SNV 0.843 1 24 hm5C_associated_SNPs_90999 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:42796808-42796845
64251 chr15 65157277 65157277 1 + G A KIRC 65157274 + 65157254 65157294 41 GAGACCACCAGCCCTGGTGACAGGGTGGAGACCCCTGTGGG GAGACCACCAGCCCTGGTGACAGAGTGGAGACCCCTGTGGG < 41bp 0.820844696457945 0.612174874387791 0.9168819 0.7625985 prediction 0.417339644140308 Functional Loss - PLEKHO2 ENSG00000241839 CDS Human protein_coding chr15:65157274 chr15:65157277 synonymous SNV . 0 24 hm5C_associated_SNPs_91000 0 0 1 EIF3H POSTAR2 ENCODE chr15:65157264-65157324
64251 chr19 3382241 3382241 1 + G A BLCA 3382238 + 3382218 3382258 41 TGGCCTACTTCGTGCGTGAGCGAGGTGAGGTGTGGTGGCCT TGGCCTACTTCGTGCGTGAGCGAAGTGAGGTGTGGTGGCCT < 41bp 0.708667158370776 0.451325764081358 0.9128096 0.9100454 prediction 0.417334316741553 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3382238 chr19:3382241 nonsynonymous SNV 0.873 0 24 hm5C_associated_SNPs_91007 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr19:3382231-3382261
64251 chr10 115614776 115614776 1 + G C BRCA 115614772 + 115614752 115614792 41 TATCTGCAGAAGGTGGACGGCTGGGAGCAGGACTTGTCAGT TATCTGCAGAAGGTGGACGGCTGGCAGCAGGACTTGTCAGT < 41bp 0.708667041060717 0.432682590502371 0.4324892 0.20998058 prediction 0.417334082121434 Functional Loss - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115614772 chr10:115614776 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_91008 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:115614758-115614789
64251 chrX 56592162 56592162 1 + T C COAD 56592161 + 56592141 56592181 41 ATGCAGCCATTGAAAGGCTGCTGGGCTCCCAGCCATCGTAA ATGCAGCCATTGAAAGGCTGCCGGGCTCCCAGCCATCGTAA < 41bp 0.708664744388687 0.485633039990786 0.59198016 0.8630928 prediction 0.417329488777374 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592161 chrX:56592162 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_91011 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:56592152-56592175
64251 chr11 7674769 7674769 1 + G A rs115145117 7674766 + 7674746 7674786 41 ACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCC ACATGAACTTCGATGCAGGTCCAAAGACCATGGACACTCCC < 41bp 0.757466188768113 0.548803675370339 0.3961017 0.3591873 prediction 0.417325026795548 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7674766 chr11:7674769 unknown . 0 24 hm5C_associated_SNPs_91013 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:7674750-7674802
64251 chr5 131607115 131607115 1 + G A UCEC 131607112 + 131607092 131607132 41 GGCCGCGGAGCCCAAGCAGTCAGGCTCCTTCCGCTACTTGC GGCCGCGGAGCCCAAGCAGTCAGACTCCTTCCGCTACTTGC < 41bp 0.70865989035805 0.46680793470456 0.9047068 0.8766401 prediction 0.4173197807161 Functional Loss - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607112 chr5:131607115 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91016 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:131607114-131607142
64251 chr3 12858415 12858415 1 + C T UCEC 12858412 + 12858392 12858432 41 TGCACATTCTGGCCTCATTCCTGCGGAAGAACCAGCGGGCT TGCACATTCTGGCCTCATTCCTGTGGAAGAACCAGCGGGCT < 41bp 0.746603917981628 0.537948033991146 0.87268096 0.612337 prediction 0.417311767980963 Functional Loss - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858412 chr3:12858415 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_91018 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:12858400-12858440
64251 chrX 48435421 48435421 1 + G A UCEC 48435418 + 48435398 48435438 41 TTTTTTTCCCCCCCAGAAACCAGGGTGGTTATGACCGCTAC TTTTTTTCCCCCCCAGAAACCAGAGTGGTTATGACCGCTAC < 41bp 0.760152147286078 0.551498929844176 0.9155463 0.85614073 prediction 0.417306434883804 Functional Loss - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48435418 chrX:48435421 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91019 0 0 27 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:48435387-48435436
64251 chr22 41911896 41911896 1 + T C KIRP 41911895 + 41911875 41911915 41 AATCGTGGAATACCACGGGCCTGGTGTAGACTCCATCTCCT AATCGTGGAATACCACGGGCCCGGTGTAGACTCCATCTCCT < 41bp 0.70864929022353 0.461755423729719 0.006822318 0.009802192 prediction 0.417298580447061 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41911895 chr22:41911896 synonymous SNV . 0 22 hm5C_associated_SNPs_91023 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:41911858-41911903
64251 chr3 150128154 150128154 1 + T C rs61734437 150128153 + 150128133 150128173 41 GCAGCCGGCTATGTCCCTGCCTCCGCAGCCGGGCCCTGCAG GCAGCCGGCTATGTCCCTGCCCCCGCAGCCGGGCCCTGCAG < 41bp 0.802002101510048 0.593357070179795 0.26093963 0.041472554 prediction 0.417290062660507 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128153 chr3:150128154 synonymous SNV . 0 22 hm5C_associated_SNPs_91028 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:150128122-150128160
64251 chr6 155577715 155577715 1 - C T UCEC 155577718 - 155577698 155577738 41 CTGCTCTGGGTGCCGCTGCTCAAGCTGCCCTCGTCAGAGTC CTGCTCTGGGTGCCGCTGCTCAAACTGCCCTCGTCAGAGTC < 41bp 0.787416095155798 0.578771622613586 0.51451 0.11179152 prediction 0.417288945084424 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577718 chr6:155577715 synonymous SNV . 0 24 hm5C_associated_SNPs_91029 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:155577677-155577715
64251 chr3 69151039 69151039 1 + G A BLCA 69151036 + 69151016 69151056 41 TGGGAGGAATCGTGGTGGTGCTGGTGTTCACAGGGTTTGTG TGGGAGGAATCGTGGTGGTGCTGATGTTCACAGGGTTTGTG < 41bp 0.803716843912177 0.595085194660942 0.23933578 0.19507298 prediction 0.41726329850247 Functional Loss - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69151036 chr3:69151039 nonsynonymous SNV 0.869 3 24 hm5C_associated_SNPs_91036 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:69151001-69151096
64251 chr4 6718511 6718511 1 + A C LUAD 6718510 + 6718490 6718530 41 AGTCTGCTCCCTCGAGGCCACAGCAAGCCGGCTACGAAGCC AGTCTGCTCCCTCGAGGCCACCGCAAGCCGGCTACGAAGCC < 41bp 0.823836218948414 0.615204891239535 0.42120185 0.3136368 prediction 0.417262655417757 Functional Loss - BLOC1S4 ENSG00000186222 CDS Human protein_coding chr4:6718510 chr4:6718511 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_91038 0 0 1 RBM15 POSTAR2 ENCODE chr4:6718461-6718529
64251 chr4 3415891 3415891 1 + C T COAD 3415888 + 3415868 3415908 41 GCGTGCAGAGCTGCCGGCGCCTGCGTGAGAGGAGGGTCGCC GCGTGCAGAGCTGCCGGCGCCTGTGTGAGAGGAGGGTCGCC < 41bp 0.708627046616147 0.496411191080572 0.7631608 0.15793896 prediction 0.417254093232294 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3415888 chr4:3415891 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_91040 0 0 3 EIF3H POSTAR2 ENCODE chr4:3415854-3415921
64251 chr12 132425913 132425913 1 + G A rs142044204 132425910 + 132425890 132425930 41 ACCTATTGCTACCTGCTGCCCACGTTTGCCTTTGCGCACAA ACCTATTGCTACCTGCTGCCCACATTTGCCTTTGCGCACAA < 41bp 0.708625114919779 0.470674000404787 0.020416975 0.019839317 prediction 0.417250229839558 Functional Loss - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132425910 chr12:132425913 synonymous SNV . 0 24 hm5C_associated_SNPs_91042 1 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:132425845-132425917
64251 chr22 50633336 50633336 1 + G T LIHC 50633334 + 50633314 50633354 41 CTGTGGCTGTTGCAGACCATCCGGGAGGTGCAGCCTGACGT CTGTGGCTGTTGCAGACCATCCTGGAGGTGCAGCCTGACGT < 41bp 0.708617735686687 0.346240292034517 0.9111763 0.19856757 prediction 0.417235471373373 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50633334 chr22:50633336 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_91044 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50633332-50633375
64251 chr10 13217572 13217572 1 + C T rs150895215 13217570 + 13217550 13217590 41 CCAACCCCTACAGACGATTTCTCGGAACAAACCTAGTGGGA CCAACCCCTACAGACGATTTCTTGGAACAAACCTAGTGGGA < 41bp 0.708611787339141 0.417925201547916 0.0983063 0.059613675 prediction 0.417223574678282 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13217570 chr10:13217572 nonsynonymous SNV 0.043 1 23 hm5C_associated_SNPs_91048 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:13217543-13217580
64251 chr10 13217573 13217573 1 + G A COAD 13217570 + 13217550 13217590 41 CCAACCCCTACAGACGATTTCTCGGAACAAACCTAGTGGGA CCAACCCCTACAGACGATTTCTCAGAACAAACCTAGTGGGA < 41bp 0.708611787339141 0.460850872402601 0.0983063 0.072927564 prediction 0.417223574678282 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13217570 chr10:13217573 nonsynonymous SNV 0.055 0 24 hm5C_associated_SNPs_91049 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:13217543-13217580
64251 chr12 1755397 1755397 1 + G A SKCM 1755394 + 1755374 1755414 41 TGTAAGAAGTGCACGGAGATCGTGGACCAGTACATCTGTAA TGTAAGAAGTGCACGGAGATCGTAGACCAGTACATCTGTAA < 41bp 0.802594947203112 0.593984343726808 0.37348315 0.21694714 prediction 0.417221206952609 Functional Loss - WNT5B ENSG00000111186 CDS Human protein_coding chr12:1755394 chr12:1755397 synonymous SNV . 0 24 hm5C_associated_SNPs_91052 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:1755380-1755418
64251 chr12 54447898 54447898 1 + G T LUAD 54447894 + 54447874 54447914 41 GCCTCCGCGCCCTAGCTACCCTGAGCGCCAGTATAGCTGCA GCCTCCGCGCCCTAGCTACCCTGATCGCCAGTATAGCTGCA < 41bp 0.708605066856626 0.499861183304235 0.030427665 0.007686734 prediction 0.417210133713252 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54447894 chr12:54447898 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_91054 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:54447891-54447916
64251 chr16 683820 683820 1 + C T CESC 683818 + 683798 683838 41 TCAAGGATGACAAGATGGGCCTCAAGTTCTTGGGCACCAAG TCAAGGATGACAAGATGGGCCTTAAGTTCTTGGGCACCAAG < 41bp 0.708603639621399 0.4532257280635 0.16663444 0.11076471 prediction 0.417207279242799 Functional Loss - WFIKKN1 ENSG00000127578 CDS Human protein_coding chr16:683818 chr16:683820 synonymous SNV . 0 23 hm5C_associated_SNPs_91056 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:683808-683846
64251 chr12 122252612 122252612 1 + G A ESCA 122252609 + 122252589 122252629 41 TGAGCAACTCCGGCCCAGGCCGCGGGCAGCACTGGCCACCA TGAGCAACTCCGGCCCAGGCCGCAGGCAGCACTGGCCACCA < 41bp 0.828179125066933 0.619576919908339 0.23111773 0.08576763 prediction 0.417204410317188 Functional Loss - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122252609 chr12:122252612 nonsynonymous SNV 0.924 3 24 hm5C_associated_SNPs_91057 0 0 2 RBM15 POSTAR2 ENCODE chr12:122252520-122252633
64251 chr1 207250058 207250058 1 + G T rs12079709 207250055 + 207250035 207250075 41 ATGTTGACCAACTGGTAGACCAGGAGGATCTGTGTGCTGAT ATGTTGACCAACTGGTAGACCAGTAGGATCTGTGTGCTGAT < 41bp 0.85175518920141 0.643153261289319 0.6933224 0.3331992 prediction 0.417203855824182 Functional Loss - PFKFB2 ENSG00000123836 UTR3 Human protein_coding chr1:207250055 chr1:207250058 . . 0 24 hm5C_associated_SNPs_91058 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:207249996-207250245
64251 chr5 157164914 157164914 1 + A T SKCM 157164912 + 157164892 157164932 41 CAGGGAACTCTTGCAGCAGACAAGAATGAGATTTTGTTTTC CAGGGAACTCTTGCAGCAGACATGAATGAGATTTTGTTTTC < 41bp 0.737151915080038 0.528552116698021 0.36553514 0.29079813 prediction 0.417199596764034 Functional Loss - THG1L ENSG00000113272 CDS Human protein_coding chr5:157164912 chr5:157164914 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_91063 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:157164910-157164934
64251 chrX 152913548 152913548 1 + G T rs782447329 152913546 + 152913526 152913566 41 GGGCGCTGAGCGTGGCCCTGCCGGCGCTCCTGCTGCGCCGC GGGCGCTGAGCGTGGCCCTGCCTGCGCTCCTGCTGCGCCGC < 41bp 0.708598413596394 0.339826916402666 0.84518266 0.13314709 prediction 0.417196827192788 Functional Loss - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152913546 chrX:152913548 synonymous SNV . 0 23 hm5C_associated_SNPs_91064 0 0 2 DDX3X POSTAR2 ENCODE chrX:152913528-152913579
64251 chr19 35660609 35660609 1 + G T rs533690554 35660606 + 35660586 35660626 41 TGCCCAGCCTCCTGCATCCCCTCGAAGAGCCTGGCCAGAGA TGCCCAGCCTCCTGCATCCCCTCTAAGAGCCTGGCCAGAGA < 41bp 0.930790853956607 0.722194947525396 0.8770131 0.9380586 prediction 0.417191812862422 Functional Loss - FXYD5 ENSG00000089327 UTR3 Human protein_coding chr19:35660606 chr19:35660609 . . 0 24 hm5C_associated_SNPs_91065 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:35660565-35660614
64251 chr17 73517849 73517849 1 + C T SKCM 73517846 + 73517826 73517866 41 CAACCCAAGAGTCTGGCAGCCTCCAGCCCACCTCCCTGCAG CAACCCAAGAGTCTGGCAGCCTCTAGCCCACCTCCCTGCAG < 41bp 0.749223092878438 0.540629222454378 0.92827654 0.43803075 prediction 0.41718774084812 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73517846 chr17:73517849 synonymous SNV . 0 24 hm5C_associated_SNPs_91068 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73517816-73517889
64251 chr16 840190 840190 1 + A C rs147014783 840186 + 840166 840206 41 CTTCCCCACAGGGCTCTCTCCTCCACGTCCCATGGCGAGGC CTTCCCCACAGGGCTCTCTCCTCCCCGTCCCATGGCGAGGC < 41bp 0.70859379265092 0.299864187012966 0.94326556 0.7860818 prediction 0.417187585301841 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:840186 chr16:840190 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_91069 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:840164-840192
64251 chr15 40710657 40710657 1 + C T rs77680513 40710655 + 40710635 40710675 41 CCTCGCAGCCGGGCCTGTGCCACGGCTAGTGTTGTGTGATT CCTCGCAGCCGGGCCTGTGCCATGGCTAGTGTTGTGTGATT < 41bp 0.805387908867885 0.596794439875259 0.17877889 0.14128119 prediction 0.417186937985253 Functional Loss - IVD ENSG00000128928 UTR3 Human protein_coding chr15:40710655 chr15:40710657 . . 0 23 hm5C_associated_SNPs_91070 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:40710651-40710675
64251 chr4 159092383 159092383 1 - C A rs199967131 159092387 - 159092367 159092407 41 GGCACTGCGTGTGCCATCTACTTGGGCTTCCTGGTGAGCCA GGCACTGCGTGTGCCATCTACTTGTGCTTCCTGGTGAGCCA < 41bp 0.724047088174904 0.515453657202958 0.58008087 0.20733291 prediction 0.417186861943893 Functional Loss - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092387 chr4:159092383 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_91071 0 0 5 DDX3X POSTAR2 ENCODE chr4:159092317-159092412
64251 chr7 107217866 107217866 1 + G T UCEC 107217864 + 107217844 107217884 41 GTTGACATTGCTCTTGAACTCGGGACTCCTTACATGTGTTT GTTGACATTGCTCTTGAACTCGTGACTCCTTACATGTGTTT < 41bp 0.887315451476432 0.678726053157618 0.8598239 0.14957106 prediction 0.417178796637628 Functional Loss - DUS4L ENSG00000105865 CDS Human protein_coding chr7:107217864 chr7:107217866 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_91072 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:107217849-107217876
64251 chr9 131038983 131038983 1 + T C BLCA 131038982 + 131038962 131039002 41 CTTTCCCCTCGGATTCCTCTCTAGGACTGAACCAAGACTTA CTTTCCCCTCGGATTCCTCTCCAGGACTGAACCAAGACTTA < 41bp 0.791661690687108 0.583075980920585 0.5781524 0.5860349 prediction 0.417171419533046 Functional Loss - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131038982 chr9:131038983 synonymous SNV . 0 22 hm5C_associated_SNPs_91076 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr9:131038960-131038985
64251 chr19 52084667 52084667 1 + G A UCEC 52084664 + 52084644 52084684 41 GCATCAGTGTCATTTGAGGACGTGACCGTGGACTTCAGCAG GCATCAGTGTCATTTGAGGACGTAACCGTGGACTTCAGCAG < 41bp 0.80908504497202 0.600499472996724 0.45852378 0.34539992 prediction 0.417171143950592 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52084664 chr19:52084667 synonymous SNV . 0 24 hm5C_associated_SNPs_91077 0 0 2 DDX6 POSTAR2 ENCODE chr19:52084652-52084695
64251 chr11 64812014 64812014 1 + G A COAD 64812011 + 64811991 64812031 41 CACGGGACCTGTGCCAGGCCCACGGGCTGCCCTTGGACGGA CACGGGACCTGTGCCAGGCCCACAGGCTGCCCTTGGACGGA < 41bp 0.819760726721301 0.611176597572417 0.4055933 0.20461714 prediction 0.417168258297768 Functional Loss - SAC3D1 ENSG00000168061 CDS Human protein_coding chr11:64812011 chr11:64812014 nonsynonymous SNV 0.955 4 24 hm5C_associated_SNPs_91078 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:64811980-64812020
64251 chr1 16255687 16255687 1 + G A SKCM 16255684 + 16255664 16255704 41 GATCTGGAGAAGCTGGAAGCCAGGAAAAGGCGCTTTGCAGA GATCTGGAGAAGCTGGAAGCCAGAAAAAGGCGCTTTGCAGA < 41bp 0.708582264134538 0.48454411297638 0.8691075 0.63647115 prediction 0.417164528269076 Functional Loss - SPEN ENSG00000065526 CDS Human protein_coding chr1:16255684 chr1:16255687 synonymous SNV . 0 24 hm5C_associated_SNPs_91082 0 0 16 FMR1 POSTAR2 GSE39682,GSM977615 chr1:16255621-16255721
64251 chr15 95399115 95399115 1 + G A rs28639753 95399112 + 95399092 95399132 41 CCAAAGACGTCCTCGCCCACCAGGTCCCGAACGCCAAGAAG CCAAAGACGTCCTCGCCCACCAGATCCCGAACGCCAAGAAG < 41bp 0.708574983607321 0.457148161792889 0.6491738 0.59926456 prediction 0.417149967214643 Functional Loss - LOC440311 ENSG00000260521 ncRNA_exonic Human processed_pseudogene chr15:95399112 chr15:95399115 . . 0 24 hm5C_associated_SNPs_91091 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:95399109-95399130
64251 chr16 19475108 19475108 1 + G T UCEC 19475104 + 19475084 19475124 41 AATCCTGATTCCAGGCTTATCGGAGATCCAAGAACAGCCTG AATCCTGATTCCAGGCTTATCGGATATCCAAGAACAGCCTG < 41bp 0.763108195523767 0.554536829918718 0.9201833 0.8637228 prediction 0.417142731210098 Functional Loss - TMC5 ENSG00000103534 CDS Human protein_coding chr16:19475104 chr16:19475108 nonsynonymous SNV 0.153 4 25 hm5C_associated_SNPs_91093 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:19475100-19475140
64251 chr19 42402170 42402170 1 + G T rs182824002 42402167 + 42402147 42402187 41 CGGCCTTCCCGGGGCAGCCTCGGGGCTAAGGGCCGGGGTGG CGGCCTTCCCGGGGCAGCCTCGGTGCTAAGGGCCGGGGTGG < 41bp 0.897258261529848 0.688692463447197 0.95397025 0.9103602 prediction 0.417131596165301 Functional Loss - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42402167 chr19:42402170 synonymous SNV . 0 24 hm5C_associated_SNPs_91098 0 0 9 CELF2 POSTAR2 GSE71264,GSM1831622 chr19:42402160-42402180
64251 chr11 12246260 12246260 1 + G T UCEC 12246258 + 12246238 12246278 41 GCAAGCTCCTGACCTGGTGCCAGCAGCAGACAGAGGGCTAC GCAAGCTCCTGACCTGGTGCCATCAGCAGACAGAGGGCTAC < 41bp 0.708564568096978 0.352686832110153 0.5582403 0.10135552 prediction 0.417129136193957 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12246258 chr11:12246260 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_91100 0 0 1 FMR1 POSTAR2 ENCODE chr11:12246233-12246368
64251 chr12 110341757 110341757 1 + G T UCEC 110341755 + 110341735 110341775 41 CACCCAGCATGCATGCCTATCAGCGGGAGAAGATGAAGGAG CACCCAGCATGCATGCCTATCATCGGGAGAAGATGAAGGAG < 41bp 0.708561217701384 0.347713735124831 0.8775141 0.43427402 prediction 0.417122435402768 Functional Loss - TCHP ENSG00000139437 CDS Human protein_coding chr12:110341755 chr12:110341757 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_91102 0 0 7 DDX24 POSTAR2 ENCODE chr12:110341751-110341847
64251 chr19 58722991 58722991 1 + G A rs113293561 58722988 + 58722968 58723008 41 GAGGAGTGGGGGCTGCTGGGCCCGACACAGAGGACCGAGTA GAGGAGTGGGGGCTGCTGGGCCCAACACAGAGGACCGAGTA < 41bp 0.806154370317123 0.597600849871328 0.3258916 0.22758693 prediction 0.41710704089159 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58722988 chr19:58722991 synonymous SNV . 0 24 hm5C_associated_SNPs_91109 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58722991-58723045
64251 chr14 45564617 45564617 1 + G T LUSC 45564615 + 45564595 45564635 41 GAATGCATCTACAGAAGAAACTGAAATGGCAAGTGCTGTGG GAATGCATCTACAGAAGAAACTTAAATGGCAAGTGCTGTGG < 41bp 0.893918258325507 0.685375565830729 0.16235304 0.14179006 prediction 0.417085384989556 Functional Loss - PRPF39 ENSG00000185246 CDS Human protein_coding chr14:45564615 chr14:45564617 stopgain 0.999 0 23 hm5C_associated_SNPs_91117 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:45564523-45564676
64251 chr19 17213241 17213241 1 + G A LUAD 17213238 + 17213218 17213258 41 GTGAACCAGTGCATCGTGATCTCGGGTGAGAGCGGCTCCGG GTGAACCAGTGCATCGTGATCTCAGGTGAGAGCGGCTCCGG < 41bp 0.804492745425452 0.595951141470503 0.4765888 0.18241456 prediction 0.417083207909899 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17213238 chr19:17213241 synonymous SNV . 0 24 hm5C_associated_SNPs_91120 0 0 4 FXR2 POSTAR2 ENCODE chr19:17213237-17213278
64251 chr3 179439264 179439264 1 + G A COAD 179439261 + 179439241 179439281 41 GAAGTGATCCAGGAGTCGGGCACGAAACTGAAGCCAATGTA GAAGTGATCCAGGAGTCGGGCACAAAACTGAAGCCAATGTA < 41bp 0.708541149301274 0.47132076771492 0.17953292 0.13141039 prediction 0.417082298602548 Functional Loss - USP13 ENSG00000058056 CDS Human protein_coding chr3:179439261 chr3:179439264 synonymous SNV . 0 24 hm5C_associated_SNPs_91121 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:179439245-179439264
64251 chr12 57485373 57485373 1 + G T KICH 57485369 + 57485349 57485389 41 GGGACCTGGGGCAGGGGACCCCCGGATCTGGCCAGGCCGGA GGGACCTGGGGCAGGGGACCCCCGTATCTGGCCAGGCCGGA < 41bp 0.710183845183057 0.501648272770786 0.70892173 0.48964316 prediction 0.417071144824541 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485369 chr12:57485373 synonymous SNV . 0 25 hm5C_associated_SNPs_91126 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:57485331-57485377
64251 chr1 100964692 100964692 1 + C T PAAD 100964689 + 100964669 100964709 41 TACAACAGAAGCAGCAACAGCAACGGGGGCAACCTGAACAG TACAACAGAAGCAGCAACAGCAATGGGGGCAACCTGAACAG < 41bp 0.727037800187054 0.518504544176874 0.36643308 0.21463302 prediction 0.417066512020361 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964689 chr1:100964692 synonymous SNV . 0 24 hm5C_associated_SNPs_91127 0 0 1 YBX3 POSTAR2 ENCODE chr1:100964685-100964807
64251 chr12 118582479 118582479 1 + C T SKCM 118582477 + 118582457 118582497 41 TCAGCAACCGATCTGGAGACCACCGTGGCAAATTCAAGGTG TCAGCAACCGATCTGGAGACCATCGTGGCAAATTCAAGGTG < 41bp 0.708532779261181 0.43532873552735 0.09824988 0.10062757 prediction 0.417065558522362 Functional Loss - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118582477 chr12:118582479 synonymous SNV . 0 23 hm5C_associated_SNPs_91128 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:118582460-118582480
64251 chr4 2900172 2900172 1 + C T UCEC 2900169 + 2900149 2900189 41 CTTCCCCTCAGGTTCTTATTCTCCGGAACCATGGGCTCGTG CTTCCCCTCAGGTTCTTATTCTCTGGAACCATGGGCTCGTG < 41bp 0.775296544647021 0.566772356233654 0.13472122 0.093927026 prediction 0.417048376826734 Functional Loss - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2900169 chr4:2900172 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91135 0 0 10 FUS POSTAR2 GSE40653,GSM998875 chr4:2900160-2900180
64251 chr17 40724562 40724562 1 - C T rs138365744 40724565 - 40724545 40724585 41 AAACGAGCATTTGGAGGGCCCACGGCTTCACTCAGGACCTG AAACGAGCATTTGGAGGGCCCACAGCTTCACTCAGGACCTG < 41bp 0.809230445319051 0.600706331629465 0.11009872 0.033841312 prediction 0.417048227379172 Functional Loss - MLX;PSMC3IP ENSG00000108788;ENSG00000131470 UTR3 Human other chr17:40724565 chr17:40724562 . . 0 24 hm5C_associated_SNPs_91136 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:40724341-40724682
64251 chr2 131890578 131890578 1 + T C SARC 131890577 + 131890557 131890597 41 CCCCTGAGGTAGGGAGAACCCTGAGCCTCCAGGTGAGGGAA CCCCTGAGGTAGGGAGAACCCCGAGCCTCCAGGTGAGGGAA < 41bp 0.724864564527944 0.516340787782172 0.24094555 0.81878346 prediction 0.417047553491543 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131890577 chr2:131890578 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_91137 0 0 3 PRPF8 POSTAR2 ENCODE chr2:131890552-131890612
64251 chr3 9691362 9691362 1 + T C LIHC 9691361 + 9691341 9691381 41 AGGAGCTGGGGCTTGGGGAGCTGCTGGAGGAGTTCTCCCGG AGGAGCTGGGGCTTGGGGAGCCGCTGGAGGAGTTCTCCCGG < 41bp 0.774523187106402 0.566004791451433 0.9116893 0.90822077 prediction 0.417036791309938 Functional Loss - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9691361 chr3:9691362 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_91138 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:9691345-9691371
64251 chr3 40553958 40553958 1 + G A UCEC 40553955 + 40553935 40553975 41 AAGGGGAACTGCCATGGGGCCTCGATCCCTGGGAACCTATG AAGGGGAACTGCCATGGGGCCTCAATCCCTGGGAACCTATG < 41bp 0.79974563557399 0.591232086348315 0.5840379 0.11711112 prediction 0.417027098451351 Functional Loss - ZNF620 ENSG00000177842 CDS Human protein_coding chr3:40553955 chr3:40553958 nonsynonymous SNV 0.615 0 24 hm5C_associated_SNPs_91141 0 0 1 PRPF8 POSTAR2 ENCODE chr3:40553942-40554038
64251 chr6 112671416 112671416 1 + G T UCEC 112671414 + 112671394 112671434 41 GTCTGCAAGGAGCCGGCTGACAGAAAGAGCAATGATTTATT GTCTGCAAGGAGCCGGCTGACATAAAGAGCAATGATTTATT < 41bp 0.91300523307388 0.704491944879196 0.1099444 0.13408431 prediction 0.417026576389369 Functional Loss - RFPL4B ENSG00000251258 CDS Human protein_coding chr6:112671414 chr6:112671416 nonsynonymous SNV 0.006 3 23 hm5C_associated_SNPs_91142 0 0 1 SND1 POSTAR2 ENCODE chr6:112671349-112671446
64251 chr1 110168320 110168320 1 + C T SKCM 110168317 + 110168297 110168337 41 GCTCACTGGCTGAGAGCGAGCTCCGTAGTGCCCCGTATGAG GCTCACTGGCTGAGAGCGAGCTCTGTAGTGCCCCGTATGAG < 41bp 0.742579212900511 0.534067025028385 0.11913383 0.07591754 prediction 0.417024375744254 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168317 chr1:110168320 nonsynonymous SNV 0.982 3 24 hm5C_associated_SNPs_91144 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:110168292-110168322
64251 chr5 179264458 179264458 1 - T G UCEC 179264459 - 179264439 179264479 41 GGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCCACACGA GGCCCCTGGTCCTGGAGGCACCGAATCCTCGACCCACACGA < 41bp 0.70850531290276 0.447703324738743 0.12790343 0.072779 prediction 0.41701062580552 Functional Loss - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264459 chr5:179264458 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_91147 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:179264428-179264466
64251 chr11 116701573 116701573 1 + T C UCEC 116701572 + 116701552 116701592 41 CCAAGACCGCCAAGGATGCACTGAGCAGCGTGCAGGAGTCC CCAAGACCGCCAAGGATGCACCGAGCAGCGTGCAGGAGTCC < 41bp 0.708500421860834 0.475715430241493 0.20989719 0.26769373 prediction 0.417000843721669 Functional Loss - APOC3 ENSG00000110245 CDS Human protein_coding chr11:116701572 chr11:116701573 nonsynonymous SNV 0.017 4 22 hm5C_associated_SNPs_91152 0 0 6 DDX3X POSTAR2 ENCODE chr11:116701555-116701612
64251 chr17 79990655 79990655 1 + C T UVM 79990652 + 79990632 79990672 41 CAACTTGGGGCTGTGGGACACAGCGGGTCAGGAGGACTACG CAACTTGGGGCTGTGGGACACAGTGGGTCAGGAGGACTACG < 41bp 0.716937190493397 0.508443049280964 0.5578544 0.40655002 prediction 0.416988282424866 Functional Loss - RAC3 ENSG00000169750 CDS Human protein_coding chr17:79990652 chr17:79990655 nonsynonymous SNV 0.095 4 24 hm5C_associated_SNPs_91157 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79990625-79990700
64251 chr17 79205240 79205240 1 - C A OV 79205242 - 79205222 79205262 41 ACTGTGAGGCCGTGCTGCAGCTGCTGACCTGCCACCTGCGT ACTGTGAGGCCGTGCTGCAGCTTCTGACCTGCCACCTGCGT < 41bp 0.708493448130212 0.350674958429686 0.2154989 0.16324505 prediction 0.416986896260424 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205242 chr17:79205240 synonymous SNV . 0 23 hm5C_associated_SNPs_91158 0 0 5 BUD13 POSTAR2 ENCODE chr17:79205221-79205340
64251 chr3 30732963 30732963 1 + G T HNSC 30732961 + 30732941 30732981 41 TGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGCCC TGAGTGCTGGGACCACGACCCATAGGCCCGTCTCACAGCCC < 41bp 0.70848914739069 0.358482997631954 0.88659024 0.06090042 prediction 0.416978294781381 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30732961 chr3:30732963 stopgain 0.784 1 23 hm5C_associated_SNPs_91161 0 0 4 GRWD1 POSTAR2 ENCODE chr3:30732939-30732988
64251 chr17 79974718 79974718 1 + C T LUSC 79974715 + 79974695 79974735 41 CCTGCTGGAGCATGCCATCTCCCCATCTGCGGCCGATGTGC CCTGCTGGAGCATGCCATCTCCCTATCTGCGGCCGATGTGC < 41bp 0.708485690751397 0.495734868054914 0.40924877 0.31536162 prediction 0.416971381502793 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79974715 chr17:79974718 nonsynonymous SNV 0.148 3 24 hm5C_associated_SNPs_91163 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79974705-79974746
64251 chr14 65560456 65560456 1 - C A LUAD 65560458 - 65560438 65560478 41 AAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTC AAGACAGCTTTCACAGTTTGCGTGACTCAGTCCCATCACTC < 41bp 0.903784275353087 0.695299687776693 0.6416217 0.14636788 prediction 0.416969175152789 Functional Loss - MAX ENSG00000125952 CDS Human protein_coding chr14:65560458 chr14:65560456 synonymous SNV . 0 23 hm5C_associated_SNPs_91164 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:65560433-65560457
64251 chr20 43058205 43058205 1 + G A SKCM 43058202 + 43058182 43058222 41 GCCCTCACCGCCAGGTGGCTCAGGGTCTGAGCCCTATAAGC GCCCTCACCGCCAGGTGGCTCAGAGTCTGAGCCCTATAAGC < 41bp 0.81145338812962 0.602972591213237 0.9316784 0.72288215 prediction 0.416961593832765 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43058202 chr20:43058205 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_91167 0 0 1 CDC40 POSTAR2 ENCODE chr20:43058201-43058287
64251 chr1 28864356 28864356 1 + C T SKCM 28864354 + 28864334 28864374 41 TCTCTTGCAGGTCGTGTTTTCGCCTGGGGCATGGGCACCAA TCTCTTGCAGGTCGTGTTTTCGTCTGGGGCATGGGCACCAA < 41bp 0.85681621354538 0.648338146786127 0.47192514 0.34400395 prediction 0.416956133518507 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28864354 chr1:28864356 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_91168 0 0 18 RBM10 POSTAR2 GSE44976,GSM1095143 chr1:28864338-28864359
64251 chr7 97821169 97821169 1 + C T COAD 97821166 + 97821146 97821186 41 CGTGAAATGGAGGAAGTCCTCACCGTGACCGAAACCAGCCA CGTGAAATGGAGGAAGTCCTCACTGTGACCGAAACCAGCCA < 41bp 0.744347130048302 0.535874362028219 0.24841481 0.29562998 prediction 0.416945536040165 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97821166 chr7:97821169 synonymous SNV . 0 24 hm5C_associated_SNPs_91171 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr7:97821016-97821216
64251 chr1 229772124 229772124 1 + G A COAD 229772121 + 229772101 229772141 41 CAGCCCCTGCTGGCCCTTCTCCCGGACACCCCAGGCCCAGA CAGCCCCTGCTGGCCCTTCTCCCAGACACCCCAGGCCCAGA < 41bp 0.708471558490157 0.447053521475101 0.88962543 0.6496213 prediction 0.416943116980314 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772121 chr1:229772124 synonymous SNV . 0 24 hm5C_associated_SNPs_91175 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229772100-229772140
64251 chr1 229772123 229772123 1 + C T STAD 229772121 + 229772101 229772141 41 CAGCCCCTGCTGGCCCTTCTCCCGGACACCCCAGGCCCAGA CAGCCCCTGCTGGCCCTTCTCCTGGACACCCCAGGCCCAGA < 41bp 0.708471558490157 0.440273530630637 0.88962543 0.88269913 prediction 0.416943116980314 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772121 chr1:229772123 nonsynonymous SNV 0.635 0 23 hm5C_associated_SNPs_91176 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229772100-229772140
64251 chr7 150730816 150730816 1 + G T LUAD 150730812 + 150730792 150730832 41 TGGAGCCCCTCTGCCTGGTGCTGGGTTGGGGGAGCCCTGCT TGGAGCCCCTCTGCCTGGTGCTGGTTTGGGGGAGCCCTGCT < 41bp 0.752268737308403 0.543799121451629 0.538069 0.47031063 prediction 0.416939231713547 Functional Loss - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150730812 chr7:150730816 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_91178 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:150730815-150730838
64251 chr1 229794937 229794937 1 + C T LGG 229794934 + 229794914 229794954 41 TCGAGCCTGACGTCCAGTTCCTGCGGGCCTCGCTGCAGCCG TCGAGCCTGACGTCCAGTTCCTGTGGGCCTCGCTGCAGCCG < 41bp 0.749442254881517 0.540974624155099 0.06787762 0.05628109 prediction 0.416935261452836 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229794934 chr1:229794937 nonsynonymous SNV 0.890 3 24 hm5C_associated_SNPs_91179 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:229794887-229795007
64251 chr18 192857 192857 1 + G A LUSC 192854 + 192834 192874 41 GTTCCTAGGTATGCAGGTGCCTTGAGAGCTTCAGGGGAAAT GTTCCTAGGTATGCAGGTGCCTTAAGAGCTTCAGGGGAAAT < 41bp 0.708465936054587 0.484858321487396 0.39105114 0.35958454 prediction 0.416931872109174 Functional Loss - USP14 ENSG00000101557 CDS Human protein_coding chr18:192854 chr18:192857 synonymous SNV . 0 24 hm5C_associated_SNPs_91182 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:192842-192876
64251 chr9 131749993 131749993 1 + G A COAD 131749990 + 131749970 131750010 41 CATGGTGATGGCTGCTCAGCCTCGAAGGTAGGGCTCCTTCT CATGGTGATGGCTGCTCAGCCTCAAAGGTAGGGCTCCTTCT < 41bp 0.80416114608194 0.59569552360362 0.61377245 0.19161823 prediction 0.416931244956639 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131749990 chr9:131749993 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_91183 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:131749986-131750048
64251 chr2 171693312 171693312 1 + G A LUSC 171693309 + 171693289 171693329 41 TGTTTCCTATCTAGGTCATCCTCGATTTTTCAACCAGCTCT TGTTTCCTATCTAGGTCATCCTCAATTTTTCAACCAGCTCT < 41bp 0.70846478019881 0.466842566538286 0.6400713 0.75025773 prediction 0.41692956039762 Functional Loss - GAD1 ENSG00000128683 CDS Human protein_coding chr2:171693309 chr2:171693312 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91184 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:171693300-171693320
64251 chr4 2632794 2632794 1 + G T COAD 2632792 + 2632772 2632812 41 AGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCG AGGTGAAGGCACCATCTGGCCTTCAGGGCCCGCCGCAAGCG < 41bp 0.912898940916032 0.704438382529605 0.062622786 0.0552468 prediction 0.416921116772853 Functional Loss - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2632792 chr4:2632794 synonymous SNV . 0 23 hm5C_associated_SNPs_91188 0 0 1 FMR1 POSTAR2 ENCODE chr4:2632736-2632814
64251 chr5 150867642 150867642 1 + G A HNSC 150867639 + 150867619 150867659 41 CCCTCATCATCCCACCGCTCCTGGAGGTCACCACCTTCTAC CCCTCATCATCCCACCGCTCCTGAAGGTCACCACCTTCTAC < 41bp 0.819129535935239 0.610669577487457 0.69801706 0.1783311 prediction 0.416919916895565 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150867639 chr5:150867642 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_91189 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:150867626-150867659
64251 chr19 50919882 50919882 1 + G A COAD 50919879 + 50919859 50919899 41 TCCTGCAGGGGGGGACCACACGCGCTGCAAGACGGTGCTCA TCCTGCAGGGGGGGACCACACGCACTGCAAGACGGTGCTCA < 41bp 0.811949180764658 0.603499231171314 0.4561898 0.33706588 prediction 0.416899899186689 Functional Loss - POLD1 ENSG00000062822;ENSG00000142539 CDS Human other chr19:50919879 chr19:50919882 nonsynonymous SNV 0.389 3 24 hm5C_associated_SNPs_91194 0 0 5 DDX24 POSTAR2 ENCODE chr19:50919870-50919888
64251 chr10 101421279 101421279 1 + G A rs35229854 101421276 + 101421256 101421296 41 TGAGTCCATTTCTCCGTCAGCGGGTGGCATTCCTGGGACTC TGAGTCCATTTCTCCGTCAGCGGATGGCATTCCTGGGACTC < 41bp 0.708447922523773 0.463040319398555 0.9178622 0.90097004 prediction 0.416895845047546 Functional Loss - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101421276 chr10:101421279 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_91196 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:101421260-101421280
64251 chr20 306784 306784 1 + G C CESC 306781 + 306761 306801 41 ATGCACAACGCCGAGATCTCCAAGCGCCTGGGCCGCCGCTG ATGCACAACGCCGAGATCTCCAACCGCCTGGGCCGCCGCTG < 41bp 0.715062513975401 0.506623773530823 0.9425749 0.8959559 prediction 0.416877480889156 Functional Loss - SOX12 ENSG00000177732 CDS Human protein_coding chr20:306781 chr20:306784 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91205 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr20:306775-306801
64251 chr3 50147060 50147060 1 + C T CESC 50147057 + 50147037 50147077 41 CACAGCAGTGACCACCACCTCAGCGGCTGTAGTGTCCCAGA CACAGCAGTGACCACCACCTCAGTGGCTGTAGTGTCCCAGA < 41bp 0.75648953278677 0.548052079429494 0.42615137 0.28037503 prediction 0.416874906714553 Functional Loss - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50147057 chr3:50147060 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_91207 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:50147046-50147068
64251 chr5 145428761 145428761 1 + C T UCEC 145428758 + 145428738 145428778 41 CTCAGGGGCGTCTCCTTGGTCACCGGGCGAGTCGGCATCTT CTCAGGGGCGTCTCCTTGGTCACTGGGCGAGTCGGCATCTT < 41bp 0.756317563977253 0.54788035208094 0.3360792 0.24939844 prediction 0.416874423792627 Functional Loss - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145428758 chr5:145428761 synonymous SNV . 0 24 hm5C_associated_SNPs_91208 0 0 1 PRPF8 POSTAR2 ENCODE chr5:145428750-145428889
64251 chr16 56792463 56792463 1 + G A COAD 56792460 + 56792440 56792480 41 CCTCACATAGGTCAGTTCTCCTCGGGTCTCGGGGACTTGAC CCTCACATAGGTCAGTTCTCCTCAGGTCTCGGGGACTTGAC < 41bp 0.708433449390069 0.469171635923014 0.8777988 0.16398484 prediction 0.416866898780138 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56792460 chr16:56792463 nonsynonymous SNV 0.319 2 24 hm5C_associated_SNPs_91210 0 0 2 DDX3X POSTAR2 ENCODE chr16:56792435-56792568
64251 chr6 151789676 151789676 1 + G A rs201824723 151789673 + 151789653 151789693 41 CTACTAGAGTGTATATTGTTCTCGATAATTCTGGATTTGAG CTACTAGAGTGTATATTGTTCTCAATAATTCTGGATTTGAG < 41bp 0.746206912301711 0.537783530726804 0.20865369 0.053299934 prediction 0.416846763149813 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151789673 chr6:151789676 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_91213 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:151789646-151789686
64251 chr11 4153580 4153580 1 + G T OV 4153577 + 4153557 4153597 41 CAGCTTCCACTGCTCAGATCCTGGGGAATAATGAGTCCATT CAGCTTCCACTGCTCAGATCCTGTGGAATAATGAGTCCATT < 41bp 0.708418460841554 0.315930108121107 0.3983673 0.06038338 prediction 0.416836921683108 Functional Loss - RRM1 ENSG00000167325 CDS Human protein_coding chr11:4153577 chr11:4153580 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91218 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:4153571-4153598
64251 chr19 58118003 58118003 1 + G A UCEC 58118000 + 58117980 58118020 41 AGCACTAACCTCTTTCGACACTGGAGAGTTCACACTGGAGT AGCACTAACCTCTTTCGACACTGAAGAGTTCACACTGGAGT < 41bp 0.818160853186712 0.609743670326792 0.2388519 0.061932653 prediction 0.416834365719839 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58118000 chr19:58118003 stopgain 0.000 0 24 hm5C_associated_SNPs_91219 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:58117994-58118027
64251 chr14 100589882 100589882 1 + C T SKCM 100589880 + 100589860 100589900 41 GCTTCTCTGCCCACAGGCCCCTCCAGCCAGCGTCAGGTGCA GCTTCTCTGCCCACAGGCCCCTTCAGCCAGCGTCAGGTGCA < 41bp 0.708417158510998 0.395106557493811 0.9273522 0.033586442 prediction 0.416834317021995 Functional Loss - EVL ENSG00000196405 CDS Human protein_coding chr14:100589880 chr14:100589882 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_91220 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:100589873-100589900
64251 chr21 45564772 45564772 1 + T C LIHC 45564771 + 45564751 45564791 41 ATGTGCGAGACGGCACTCCACTACATCCATGATGGGATCGG ATGTGCGAGACGGCACTCCACCACATCCATGATGGGATCGG < 41bp 0.829550594249052 0.621136905414921 0.82948875 0.193218 prediction 0.416827377668261 Functional Loss - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45564771 chr21:45564772 nonsynonymous SNV 0.714 0 22 hm5C_associated_SNPs_91223 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45564663-45564902
64251 chr17 73518266 73518266 1 + C T STAD 73518263 + 73518243 73518283 41 CAGTTCCAGGAAGATGTCAACGCCGATCCCGAGGTGCAGCG CAGTTCCAGGAAGATGTCAACGCTGATCCCGAGGTGCAGCG < 41bp 0.716059207800341 0.507645643562323 0.12200588 0.056683272 prediction 0.416827128476035 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73518263 chr17:73518266 synonymous SNV . 0 24 hm5C_associated_SNPs_91224 0 0 1 PPIG POSTAR2 ENCODE chr17:73518261-73518320
64251 chr7 99123772 99123772 1 + G A UCEC 99123769 + 99123749 99123789 41 TCAGCATCGGCGCATCCACACTGGAGAAAAACCGTTTAAGT TCAGCATCGGCGCATCCACACTGAAGAAAAACCGTTTAAGT < 41bp 0.814167380129969 0.605755543699855 0.027175367 0.012055069 prediction 0.416823672860226 Functional Loss - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123769 chr7:99123772 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91226 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:99123750-99123780
64251 chr8 76472634 76472634 1 + A T rs139324425 76472632 + 76472612 76472652 41 CAATGCATCCACATTTGTCTCAAGACCCATTAACTGGACAA CAATGCATCCACATTTGTCTCATGACCCATTAACTGGACAA < 41bp 0.708410026120662 0.498646753947067 0.25368965 0.19338658 prediction 0.416820052241323 Functional Loss - HNF4G ENSG00000164749 CDS Human protein_coding chr8:76472632 chr8:76472634 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_91227 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr8:76472619-76472647
64251 chr17 42226181 42226181 1 + G A CESC 42226178 + 42226158 42226198 41 GACTAGCTCTGGATTATTTCCTCGGATACCCTTACAACCGC GACTAGCTCTGGATTATTTCCTCAGATACCCTTACAACCGC < 41bp 0.820255653363045 0.611846351696519 0.45075557 0.16150942 prediction 0.416818603333053 Functional Loss - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42226178 chr17:42226181 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_91228 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42226105-42226196
64251 chr7 1629094 1629094 1 + A C rs149227850 1629093 + 1629073 1629113 41 CTTAGGCTAGGACCAGAAACCAGCACCCCTGCACCCACAGC CTTAGGCTAGGACCAGAAACCCGCACCCCTGCACCCACAGC < 41bp 0.708407580101592 0.453076307750405 0.34493715 0.1860258 prediction 0.416815160203184 Functional Loss - PSMG3-AS1 ENSG00000230487 ncRNA_exonic Human lincRNA chr7:1629093 chr7:1629094 . . 0 22 hm5C_associated_SNPs_91229 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:1629094-1629122
64251 chr11 64876931 64876931 1 + C T rs564977861 64876928 + 64876908 64876948 41 TACGAGACGGCCACCATCTCCTACATCCTCACTCTCACTGA TACGAGACGGCCACCATCTCCTATATCCTCACTCTCACTGA < 41bp 0.728737436870282 0.520330327298803 0.37943044 0.23218477 prediction 0.416814219142958 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64876928 chr11:64876931 synonymous SNV . 0 24 hm5C_associated_SNPs_91230 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:64876911-64876946
64251 chr19 54963326 54963326 1 + C T COAD 54963323 + 54963303 54963343 41 CCGAGAGAATGGCATGGAGACGCCGATGCACGAGAACCCGG CCGAGAGAATGGCATGGAGACGCTGATGCACGAGAACCCGG < 41bp 0.708401526525161 0.488889184568402 0.3474602 0.7222291 prediction 0.416803053050321 Functional Loss - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54963323 chr19:54963326 nonsynonymous SNV 0.209 4 24 hm5C_associated_SNPs_91232 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54963285-54963328
64251 chr10 101610442 101610442 1 + C T UCEC 101610439 + 101610419 101610459 41 GGTCCTGGATGAGGCCACTGCTGCGGTGGATCTAGAGACAG GGTCCTGGATGAGGCCACTGCTGTGGTGGATCTAGAGACAG < 41bp 0.763498370320735 0.555100688829962 0.18384054 0.14794317 prediction 0.416795362981544 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101610439 chr10:101610442 nonsynonymous SNV 0.875 5 24 hm5C_associated_SNPs_91235 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:101610440-101610460
64251 chr6 42852360 42852360 1 + C T COAD 42852357 + 42852337 42852377 41 GCTGTTCATTTCAGGATTGACGGCGTGAGTTTACTGGTGCA GCTGTTCATTTCAGGATTGACGGTGTGAGTTTACTGGTGCA < 41bp 0.74006892604056 0.531678611355401 0.5599455 0.29064012 prediction 0.416780629370319 Functional Loss - RPL7L1 ENSG00000146223 CDS Human protein_coding chr6:42852357 chr6:42852360 synonymous SNV . 0 24 hm5C_associated_SNPs_91239 0 0 33 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:42852340-42852360
64251 chr16 72046110 72046110 1 + C T LUSC 72046107 + 72046087 72046127 41 GCCCACAGACTGGCTGTTCGCTTCACCTCCCTGGGGCTCCT GCCCACAGACTGGCTGTTCGCTTTACCTCCCTGGGGCTCCT < 41bp 0.764318559224403 0.555929217599998 0.20606989 0.21423945 prediction 0.416778683248809 Functional Loss - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046107 chr16:72046110 synonymous SNV . 0 24 hm5C_associated_SNPs_91241 0 0 2 PPIG POSTAR2 ENCODE chr16:72046042-72046150
64251 chr12 109525334 109525334 1 + G A rs117645666 109525331 + 109525311 109525351 41 TACGGTCCGTCCTGCACTCACCCGATGCAGACCTTGACTTT TACGGTCCGTCCTGCACTCACCCAATGCAGACCTTGACTTT < 41bp 0.734761686577141 0.526375796645423 0.108495325 0.114509225 prediction 0.416771779863435 Functional Loss - USP30 ENSG00000135093 UTR3 Human protein_coding chr12:109525331 chr12:109525334 . . 0 24 hm5C_associated_SNPs_91244 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:109525325-109525352
64251 chr18 43796539 43796539 1 + G T UCEC 43796536 + 43796516 43796556 41 GAAGAGGTTTCAGGGAGCAGCAAGACAATCACTGCAGAGAT GAAGAGGTTTCAGGGAGCAGCAATACAATCACTGCAGAGAT < 41bp 0.708384916033981 0.339641034640664 0.31837174 0.23510423 prediction 0.416769832067963 Functional Loss - C18orf25 ENSG00000152242 CDS Human protein_coding chr18:43796536 chr18:43796539 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91245 0 0 1 RBM15 POSTAR2 ENCODE chr18:43796458-43796555
64251 chr11 125479363 125479363 1 + G A rs2241502 125479360 + 125479340 125479380 41 CCCTGGACGGGGCGTTTCTACTCGCTGCTGGATCCCTCTTA CCCTGGACGGGGCGTTTCTACTCACTGCTGGATCCCTCTTA < 41bp 0.815515193036346 0.607137366983511 0.22139698 0.015680552 prediction 0.41675565210567 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125479360 chr11:125479363 synonymous SNV . 0 24 hm5C_associated_SNPs_91250 1 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:125479334-125479372
64251 chr16 70497629 70497629 1 + C T STAD 70497626 + 70497606 70497646 41 GGCAGCGGAGGAGCCACCCTCAACGCCCTGCTGGTGGCTGC GGCAGCGGAGGAGCCACCCTCAATGCCCTGCTGGTGGCTGC < 41bp 0.720460717052489 0.512088553900805 0.826179 0.7552632 prediction 0.416744326303368 Functional Loss - FUK ENSG00000157353 CDS Human protein_coding chr16:70497626 chr16:70497629 synonymous SNV . 0 24 hm5C_associated_SNPs_91256 0 0 2 BUD13 POSTAR2 ENCODE chr16:70497594-70497646
64251 chr2 184016285 184016285 1 + A C KIRC 184016281 + 184016261 184016301 41 TATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAGT TATCGGTCAGCCACGAAAGACGACCTTATCTCCTGCCCAGT < 41bp 0.708372124843217 0.29119848037194 0.026227027 0.028951764 prediction 0.416744249686435 Functional Loss - NUP35 ENSG00000163002 CDS Human protein_coding chr2:184016281 chr2:184016285 synonymous SNV . 0 25 hm5C_associated_SNPs_91257 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:184016242-184016298
64251 chr18 9859397 9859397 1 + C T rs148383041 9859395 + 9859375 9859415 41 CACTGCTGAAGGACCCTACGCTCGGTGGCCTGGCACCTCAC CACTGCTGAAGGACCCTACGCTTGGTGGCCTGGCACCTCAC < 41bp 0.819831954770657 0.611460122921199 0.7293671 0.55480033 prediction 0.416743663698915 Functional Loss - RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9859395 chr18:9859397 . . 0 23 hm5C_associated_SNPs_91258 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:9859383-9859415
64251 chr3 50258124 50258124 1 + G T UCEC 50258121 + 50258101 50258141 41 TCTTCTCCCATCTCCCTTCACAGGATGACACCCTCCCATAC TCTTCTCCCATCTCCCTTCACAGTATGACACCCTCCCATAC < 41bp 0.916491732445397 0.708122364445904 0.89063185 0.22808453 prediction 0.416738735998985 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50258121 chr3:50258124 . . 0 24 hm5C_associated_SNPs_91259 0 0 5 DDX55 POSTAR2 ENCODE chr3:50258058-50258204
64251 chr17 16336993 16336993 1 + G A CESC 16336990 + 16336970 16337010 41 GCACTAAGCCAGATGGCAGCCCCGATGAGCGCTGGTGCTTC GCACTAAGCCAGATGGCAGCCCCAATGAGCGCTGGTGCTTC < 41bp 0.805904387562126 0.597535409598736 0.12807912 0.23438421 prediction 0.41673795592678 Functional Loss - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16336990 chr17:16336993 nonsynonymous SNV 0.884 4 24 hm5C_associated_SNPs_91260 0 0 3 EFTUD2 POSTAR2 ENCODE chr17:16336992-16337115
64251 chr1 33322520 33322520 1 + A C rs147335776 33322519 + 33322499 33322539 41 TAGACGTGGATATACCTCTTCAGGATGGCCTCCTTGCTGTC TAGACGTGGATATACCTCTTCCGGATGGCCTCCTTGCTGTC < 41bp 0.708368927609775 0.451508588947407 0.79982984 0.55132854 prediction 0.416737855219551 Functional Loss - S100PBP ENSG00000116497 UTR3 Human protein_coding chr1:33322519 chr1:33322520 . . 0 22 hm5C_associated_SNPs_91261 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:33322440-33322529
64251 chr1 23696152 23696152 1 - G A rs665977 23696154 - 23696134 23696174 41 AGCTTAGTTGCTGGTGGTTTCTCGGCCAGCCTCTGTGGTCT AGCTTAGTTGCTGGTGGTTTCTTGGCCAGCCTCTGTGGTCT < 41bp 0.776619521592045 0.568254156193526 0.2944808 0.23983979 prediction 0.416730730797037 Functional Loss - ZNF436-AS1 ENSG00000249087 CDS Human antisense chr1:23696154 chr1:23696152 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_91264 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:23696152-23696153
64251 chr7 6187483 6187483 1 + C T STAD 6187480 + 6187460 6187500 41 TGTCACCAACAAACAGGCTGCGCCAGGCTTTATCGGACCAC TGTCACCAACAAACAGGCTGCGCTAGGCTTTATCGGACCAC < 41bp 0.708365209558575 0.480278021107119 0.16153839 0.11945808 prediction 0.41673041911715 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6187480 chr7:6187483 nonsynonymous SNV 0.324 1 24 hm5C_associated_SNPs_91265 0 0 4 METAP2 POSTAR2 ENCODE chr7:6187398-6187511
64251 chr5 7893005 7893005 1 + C T rs34172797 7893002 + 7892982 7893022 41 ATACATGCATCCCATGAAGACAGCGGGAAAGCCCTGGCTCC ATACATGCATCCCATGAAGACAGTGGGAAAGCCCTGGCTCC < 41bp 0.717171824868005 0.508807426604392 0.30443713 0.2577386 prediction 0.416728796527227 Functional Loss - MTRR ENSG00000124275 CDS Human protein_coding chr5:7893002 chr5:7893005 synonymous SNV . 0 24 hm5C_associated_SNPs_91266 1 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:7892994-7893023
64251 chr19 32873927 32873927 1 + G A BLCA 32873924 + 32873904 32873944 41 TCTTGGATCATATGAAAGAGCACGAGGGTGAAATTGTAAAC TCTTGGATCATATGAAAGAGCACAAGGGTGAAATTGTAAAC < 41bp 0.721641125603122 0.513277418161304 0.1358279 0.09518996 prediction 0.416727414883635 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32873924 chr19:32873927 nonsynonymous SNV 0.957 4 24 hm5C_associated_SNPs_91268 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:32873921-32873940
64251 chr3 129233311 129233311 1 + C T PRAD 129233308 + 129233288 129233328 41 CCCGGCACGCCTATGACAAGCTGCGTGGCCTGTACATCCCT CCCGGCACGCCTATGACAAGCTGTGTGGCCTGTACATCCCT < 41bp 0.70835975762773 0.495420373963295 0.24489489 0.2770754 prediction 0.41671951525546 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129233308 chr3:129233311 nonsynonymous SNV 0.920 2 24 hm5C_associated_SNPs_91272 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:129233304-129233331
64251 chr5 37443366 37443366 1 + C T UCEC 37443364 + 37443344 37443384 41 TCTGCTTTGGGTCTGGATCCCTCAGGTGCCCGTTTGGTGAC TCTGCTTTGGGTCTGGATCCCTTAGGTGCCCGTTTGGTGAC < 41bp 0.708357792195248 0.415422907516117 0.22861937 0.0781154 prediction 0.416715584390495 Functional Loss - WDR70 ENSG00000082068 CDS Human protein_coding chr5:37443364 chr5:37443366 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_91275 0 0 2 DDX24 POSTAR2 ENCODE chr5:37443339-37443372
64251 chr6 348110 348110 1 + G T LUAD 348108 + 348088 348128 41 CTCTTGGCCCCGCAGCCTGGCCGGGGTCTCCAGGAGCGTGA CTCTTGGCCCCGCAGCCTGGCCTGGGTCTCCAGGAGCGTGA < 41bp 0.708355633875758 0.339260317974345 0.91081566 0.03304568 prediction 0.416711267751517 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348108 chr6:348110 nonsynonymous SNV 0.925 5 23 hm5C_associated_SNPs_91277 0 0 4 BUD13 POSTAR2 ENCODE chr6:348092-348142
64251 chr6 348111 348111 1 + G A SKCM 348108 + 348088 348128 41 CTCTTGGCCCCGCAGCCTGGCCGGGGTCTCCAGGAGCGTGA CTCTTGGCCCCGCAGCCTGGCCGAGGTCTCCAGGAGCGTGA < 41bp 0.708355633875758 0.461627213886167 0.91081566 0.29101172 prediction 0.416711267751517 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348108 chr6:348111 nonsynonymous SNV 0.954 5 24 hm5C_associated_SNPs_91278 0 0 4 BUD13 POSTAR2 ENCODE chr6:348092-348142
64251 chr20 44048190 44048190 1 + G T UCEC 44048187 + 44048167 44048207 41 GGCAGATCGCTTGTTCCACACCAGCTACCACTCCCAGGCAG GGCAGATCGCTTGTTCCACACCATCTACCACTCCCAGGCAG < 41bp 0.708353838479801 0.350526102998652 0.13867849 0.018064976 prediction 0.416707676959603 Functional Loss - PIGT ENSG00000124155 CDS Human protein_coding chr20:44048187 chr20:44048190 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91280 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:44048156-44048191
64251 chr6 26409783 26409783 1 + G A BLCA 26409780 + 26409760 26409800 41 GACCCCTTCTTCAGGAGCGCCCAGAGGTGGATCGCCGCCCT GACCCCTTCTTCAGGAGCGCCCAAAGGTGGATCGCCGCCCT < 41bp 0.708349524478922 0.462125619147173 0.8258537 0.26257476 prediction 0.416699048957844 Functional Loss - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26409780 chr6:26409783 synonymous SNV . 0 24 hm5C_associated_SNPs_91284 0 0 3 EFTUD2 POSTAR2 ENCODE chr6:26409717-26409797
64251 chr16 5128005 5128005 1 + C T SKCM 5128003 + 5127983 5128023 41 GAAGCTGGGCAGCATGCACTCTCCGTTCAGGGCCCGGTAGG GAAGCTGGGCAGCATGCACTCTTCGTTCAGGGCCCGGTAGG < 41bp 0.864427839723953 0.656079290831509 0.15239438 0.06221649 prediction 0.416697097784888 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128003 chr16:5128005 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_91285 0 0 2 SND1 POSTAR2 ENCODE chr16:5127931-5128009
64251 chr10 43882107 43882107 1 - T G UCEC 43882111 - 43882091 43882131 41 ACGGGGCCGGCTACAGTGGGCAGAACAGCATGGGTGGCTAT ACGGGGCCGGCTACAGTGGGCAGACCAGCATGGGTGGCTAT < 41bp 0.708348076541268 0.307965179029182 0.72885466 0.81209546 prediction 0.416696153082535 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882111 chr10:43882107 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_91287 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350198 chr10:43881958-43882165
64251 chr2 114697584 114697584 1 + G T UCEC 114697582 + 114697562 114697602 41 TATTAAACACATTCCAATCGCAGGACGAGATATAACATATT TATTAAACACATTCCAATCGCATGACGAGATATAACATATT < 41bp 0.708346277671593 0.377906337521852 0.38147432 0.03619635 prediction 0.416692555343186 Functional Loss - ACTR3 ENSG00000115091 CDS Human protein_coding chr2:114697582 chr2:114697584 stopgain 0.998 1 23 hm5C_associated_SNPs_91288 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:114697540-114697585
64251 chr9 101602320 101602320 1 + C T UCEC 101602317 + 101602297 101602337 41 ATGTGACAGAGAGGAAGCAGCTCCGGGACAAGCTCCAGTGT ATGTGACAGAGAGGAAGCAGCTCTGGGACAAGCTCCAGTGT < 41bp 0.708342778946423 0.477286685431378 0.26090655 0.31010312 prediction 0.416685557892846 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101602317 chr9:101602320 nonsynonymous SNV 0.706 4 24 hm5C_associated_SNPs_91291 0 0 6 SRSF1 POSTAR2 ENCODE chr9:101602284-101602344
64251 chr12 110013842 110013842 1 + C T COAD 110013839 + 110013819 110013859 41 CCTTGAACTTGAGAACATTCCTCCGGCTTCAACCCCACAGC CCTTGAACTTGAGAACATTCCTCTGGCTTCAACCCCACAGC < 41bp 0.708342753335395 0.477766485068942 0.28465384 0.17001617 prediction 0.41668550667079 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110013839 chr12:110013842 nonsynonymous SNV 0.972 2 24 hm5C_associated_SNPs_91292 0 0 3 DDX3X POSTAR2 ENCODE chr12:110013813-110013932
64251 chr10 44104101 44104101 1 + C T rs45545532 44104099 + 44104079 44104119 41 GGATGTGGCTGTGGCCTTTACCCGGATTGAGTGGAGACACC GGATGTGGCTGTGGCCTTTACCTGGATTGAGTGGAGACACC < 41bp 0.843240103007181 0.634900751095891 0.83077854 0.22116259 prediction 0.41667870382258 Functional Loss - ZNF485 ENSG00000198298 CDS Human protein_coding chr10:44104099 chr10:44104101 nonsynonymous SNV 0.760 0 23 hm5C_associated_SNPs_91293 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:44104095-44104116
64251 chr19 15791309 15791309 1 + A C STAD 15791308 + 15791288 15791328 41 TCCTATATAACGATCTTCAACAAGAGTGCAAACATCATGCT TCCTATATAACGATCTTCAACCAGAGTGCAAACATCATGCT < 41bp 0.846169691298937 0.637831838402687 0.017198801 0.016474366 prediction 0.416675705792501 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15791308 chr19:15791309 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_91296 0 0 4 GRWD1 POSTAR2 ENCODE chr19:15791273-15791332
64251 chr17 1674355 1674355 1 + C T SKCM 1674352 + 1674332 1674372 41 AGCGAACAGAATCCATCATTCACCGGGCTCTCTACTATGAC AGCGAACAGAATCCATCATTCACTGGGCTCTCTACTATGAC < 41bp 0.708337246457067 0.4897573959663 0.16474709 0.13985494 prediction 0.416674492914134 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1674352 chr17:1674355 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_91297 0 0 9 BUD13 POSTAR2 ENCODE chr17:1674264-1674376
64251 chrX 38664340 38664340 1 + G A rs142259633 38664337 + 38664317 38664357 41 GACGTGCCCCTGGCTGACCCCGGGTTAGACAACGATGTTGG GACGTGCCCCTGGCTGACCCCGGATTAGACAACGATGTTGG < 41bp 0.810006321102363 0.601675249330275 0.87076783 0.6565961 prediction 0.416662143544175 Functional Loss - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664337 chrX:38664340 synonymous SNV . 0 24 hm5C_associated_SNPs_91299 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:38664281-38664341
64251 chr16 841308 841308 1 + G A BLCA 841305 + 841285 841325 41 CCCCAGGCAAGTGGAAGAGCCACGAACAGGTGCTGGAGGAG CCCCAGGCAAGTGGAAGAGCCACAAACAGGTGCTGGAGGAG < 41bp 0.718184703604141 0.509859844488024 0.5341584 0.15333009 prediction 0.416649718232233 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:841305 chr16:841308 nonsynonymous SNV 0.950 1 24 hm5C_associated_SNPs_91305 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr16:841300-841320
64251 chr1 209849179 209849179 1 + C T HNSC 209849176 + 209849156 209849196 41 ATGGAGACTGTGTGCAGCCCCTTCACGGCCGCCAGACGTCT ATGGAGACTGTGTGCAGCCCCTTTACGGCCGCCAGACGTCT < 41bp 0.725568572443536 0.51724845476069 0.055240482 0.057236254 prediction 0.416640235365692 Functional Loss - G0S2 ENSG00000123689 CDS Human protein_coding chr1:209849176 chr1:209849179 synonymous SNV . 0 24 hm5C_associated_SNPs_91311 0 0 2 RBM15 POSTAR2 ENCODE chr1:209849149-209849192
64251 chr14 105935818 105935818 1 + G A COAD 105935815 + 105935795 105935835 41 TCTCATCAGGTCTGGCAAACCACGGACAGGCCAGGCACATG TCTCATCAGGTCTGGCAAACCACAGACAGGCCAGGCACATG < 41bp 0.804958452728135 0.59663882070019 0.057533503 0.021899551 prediction 0.41663926405589 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105935815 chr14:105935818 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_91312 0 0 12 CPSF3 POSTAR2 GSE37401,GSM917669 chr14:105935797-105935818
64251 chr5 169116287 169116287 1 + G T LUAD 169116284 + 169116264 169116304 41 ACCTAGTGCGATGGGGCAGCCGGGGCTTCCCTAAGGAGATT ACCTAGTGCGATGGGGCAGCCGGTGCTTCCCTAAGGAGATT < 41bp 0.708316006428002 0.346057663610777 0.88073456 0.28700057 prediction 0.416632012856004 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169116284 chr5:169116287 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_91314 0 0 2 FMR1 POSTAR2 ENCODE chr5:169116268-169116307
64251 chr14 105716569 105716569 1 + C T STAD 105716566 + 105716546 105716586 41 GCCTCGCCCCGCAGAGGTGCCACCGATTCCAGTCTTCTGCC GCCTCGCCCCGCAGAGGTGCCACTGATTCCAGTCTTCTGCC < 41bp 0.711377341468755 0.503061949502706 0.33370215 0.40823185 prediction 0.416630783932098 Functional Loss - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716566 chr14:105716569 stopgain 0.993 1 24 hm5C_associated_SNPs_91315 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:105716516-105716571
64251 chr2 113251755 113251755 1 + G T OV 113251753 + 113251733 113251773 41 AGCCCTGAACTGGCTGAGTCCTGCACATGGTTCCCTGAATC AGCCCTGAACTGGCTGAGTCCTTCACATGGTTCCCTGAATC < 41bp 0.708305337928154 0.369253582202534 0.20310068 0.15551516 prediction 0.416610675856309 Functional Loss - TTL ENSG00000114999 CDS Human protein_coding chr2:113251753 chr2:113251755 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_91320 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr2:113251739-113251766
64251 chr10 70916779 70916779 1 + G A CESC 70916776 + 70916756 70916796 41 TTCTCAGAACTTTTCAATGACAAGAGTAATACTCATGAATT TTCTCAGAACTTTTCAATGACAAAAGTAATACTCATGAATT < 41bp 0.708430635280827 0.500131472017463 0.2873981 0.25730968 prediction 0.416598326526728 Functional Loss - VPS26A ENSG00000122958 CDS Human protein_coding chr10:70916776 chr10:70916779 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_91323 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:70916762-70916792
64251 chr6 41899507 41899507 1 + C T LUSC 41899504 + 41899484 41899524 41 GCGAGTCTGGCACTTGTACCCTCCGGGAAGCCATCATTGTG GCGAGTCTGGCACTTGTACCCTCTGGGAAGCCATCATTGTG < 41bp 0.772006476014779 0.563720148030542 0.110637665 0.08381382 prediction 0.416572655968474 Functional Loss - BYSL ENSG00000112578 CDS Human protein_coding chr6:41899504 chr6:41899507 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_91334 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:41899490-41899517
64251 chr14 95030079 95030079 1 + C T STAD 95030077 + 95030057 95030097 41 CTGAGCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGGC CTGAGCATCTCGGCGGCCTACGTCATGCTTTCCCTGGGGGC < 41bp 0.874409836260567 0.66612767225977 0.23199457 0.25964296 prediction 0.416564328001595 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030077 chr14:95030079 nonsynonymous SNV 0.697 4 23 hm5C_associated_SNPs_91337 0 0 2 RPS3 POSTAR2 ENCODE chr14:95030079-95030113
64251 chr9 82335084 82335084 1 + G T LUSC 82335082 + 82335062 82335102 41 TCCAACCCCACGCATCAAGGCAGAGCTGACATCCTCGGCCC TCCAACCCCACGCATCAAGGCATAGCTGACATCCTCGGCCC < 41bp 0.708281979407897 0.338446938713998 0.41638523 0.19686809 prediction 0.416563958815794 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82335082 chr9:82335084 stopgain 0.998 1 23 hm5C_associated_SNPs_91339 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:82335073-82335098
64251 chr6 110514412 110514412 1 + G T HNSC 110514409 + 110514389 110514429 41 ATTTGGAGACTGGAGTTCACCTTGACCCTGCCGTCAAAGAA ATTTGGAGACTGGAGTTCACCTTTACCCTGCCGTCAAAGAA < 41bp 0.708281766266736 0.336758341084784 0.1296607 0.0717946 prediction 0.416563532533472 Functional Loss - CDC40 ENSG00000168438 CDS Human protein_coding chr6:110514409 chr6:110514412 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91340 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:110514388-110514412
64251 chr15 90611596 90611596 1 + C T COAD 90611593 + 90611573 90611613 41 GAGAGTGGCCGCTGCCATGTCTGCGTCGAGTGCGGCCTGGA GAGAGTGGCCGCTGCCATGTCTGTGTCGAGTGCGGCCTGGA < 41bp 0.744922688952432 0.536643654204416 0.36535555 0.16104048 prediction 0.416558069496034 Functional Loss - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90611593 chr15:90611596 synonymous SNV . 0 24 hm5C_associated_SNPs_91344 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90611595-90611633
64251 chr10 99211944 99211944 1 + G A UCEC 99211941 + 99211921 99211961 41 CCTCCGAACCTACTCAGTGCCACGACTCTGCTGGCATTTCT CCTCCGAACCTACTCAGTGCCACAACTCTGCTGGCATTTCT < 41bp 0.783408918086551 0.575132193906904 0.07951853 0.06912908 prediction 0.416553448359294 Functional Loss - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211941 chr10:99211944 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_91347 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:99211926-99211976
64251 chr14 96001624 96001624 1 + G A rs28680410 96001621 + 96001601 96001641 41 AAGGGGACGCCGGAGCAGCCCCAGTGCGGCTTCAGCAACGC AAGGGGACGCCGGAGCAGCCCCAATGCGGCTTCAGCAACGC < 41bp 0.708275642059794 0.466879018346389 0.23727763 0.20727661 prediction 0.416551284119587 Functional Loss - GLRX5 ENSG00000182512 CDS Human protein_coding chr14:96001621 chr14:96001624 synonymous SNV . 0 24 hm5C_associated_SNPs_91348 1 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:96001601-96001629
64251 chr5 150867599 150867599 1 + C T rs199863918 150867596 + 150867576 150867616 41 CTGGTCATCTCCCTGGTGGGCTCCGTGAGCAGCAGCGCCCT CTGGTCATCTCCCTGGTGGGCTCTGTGAGCAGCAGCGCCCT < 41bp 0.708274810027022 0.493426620758716 0.18335205 0.17270973 prediction 0.416549620054044 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150867596 chr5:150867599 synonymous SNV . 0 24 hm5C_associated_SNPs_91350 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:150867579-150867610
64251 chr12 119588935 119588935 1 + G T LUSC 119588933 + 119588913 119588953 41 TCCCGCAGCTCCTCCTATGCCAGCACCCGATCCTCCAGTCA TCCCGCAGCTCCTCCTATGCCATCACCCGATCCTCCAGTCA < 41bp 0.708271397023249 0.345761054297205 0.22439933 0.07107678 prediction 0.416542794046498 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119588933 chr12:119588935 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_91352 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119588900-119589000
64251 chr12 47629507 47629507 1 + G A COAD 47629504 + 47629484 47629524 41 ACTTGCATTTCCACTTCCGCCACGCGAGGGAGAACCTGCAC ACTTGCATTTCCACTTCCGCCACACGAGGGAGAACCTGCAC < 41bp 0.708270033547139 0.455411039644634 0.48262915 0.7247995 prediction 0.416540067094278 Functional Loss - PCED1B ENSG00000179715 CDS Human protein_coding chr12:47629504 chr12:47629507 nonsynonymous SNV 0.131 0 24 hm5C_associated_SNPs_91354 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:47629471-47629509
64251 chr5 139928645 139928645 1 + A C UCEC 139928644 + 139928624 139928664 41 GGAGCTGAAGGAGCAGGAGACAGAGGAAGAGATACCCGGTA GGAGCTGAAGGAGCAGGAGACCGAGGAAGAGATACCCGGTA < 41bp 0.708264352377977 0.432838474433613 0.9323911 0.899698 prediction 0.416528704755954 Functional Loss - ANKHD1-EIF4EBP3;EIF4EBP3 ENSG00000131503;ENSG00000243056;ENSG00000254996 CDS Human other chr5:139928644 chr5:139928645 synonymous SNV . 0 22 hm5C_associated_SNPs_91358 0 0 2 PRPF8 POSTAR2 ENCODE chr5:139928622-139928688
64251 chr16 70193939 70193939 1 + G A rs532942197 70193936 + 70193916 70193956 41 TCATAGCATTTTGTGCTCACCACGAAGGATGGTCTCTGCCT TCATAGCATTTTGTGCTCACCACAAAGGATGGTCTCTGCCT < 41bp 0.738321629245113 0.53006406724963 0.08633122 0.078163505 prediction 0.416515123990967 Functional Loss - LOC400541 ENSG00000247228 ncRNA_exonic Human antisense chr16:70193936 chr16:70193939 . . 0 24 hm5C_associated_SNPs_91363 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:70193920-70193940
64251 chr11 65629482 65629482 1 + G A rs148465534 65629479 + 65629459 65629499 41 GCCAGCTCGGCACTCAGGAGCCCGAGTGATACTGCTGGTGC GCCAGCTCGGCACTCAGGAGCCCAAGTGATACTGCTGGTGC < 41bp 0.828900223752484 0.620643919785883 0.6135399 0.6707053 prediction 0.416512607933202 Functional Loss - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65629479 chr11:65629482 nonsynonymous SNV 0.481 1 24 hm5C_associated_SNPs_91364 0 0 3 DDX24 POSTAR2 ENCODE chr11:65629468-65629482
64251 chr4 83372273 83372273 1 + G T UCEC 83372271 + 83372251 83372291 41 ATGGAGTGGATGATCTGCAACAGATGATCCAGGCCGTGGTA ATGGAGTGGATGATCTGCAACATATGATCCAGGCCGTGGTA < 41bp 0.708256064693482 0.35314223394925 0.7702673 0.034343958 prediction 0.416512129386964 Functional Loss - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83372271 chr4:83372273 nonsynonymous SNV 0.015 0 23 hm5C_associated_SNPs_91365 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:83372273-83372305
64251 chr1 214507595 214507595 1 + G A STAD 214507592 + 214507572 214507612 41 TGGCCTCCATGTGGTTGAAGCTAGGGAGACTCTACATGGGC TGGCCTCCATGTGGTTGAAGCTAAGGAGACTCTACATGGGC < 41bp 0.708253116193299 0.469063868298832 0.13873729 0.058982283 prediction 0.416506232386597 Functional Loss - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214507592 chr1:214507595 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_91366 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:214507588-214507606
64251 chr16 771425 771425 1 + C T rs145867712 771423 + 771403 771443 41 GCCCGGCTTCCGGCGCGTGCCGCTGCGGCTGCAGGTGCGGG GCCCGGCTTCCGGCGCGTGCCGTTGCGGCTGCAGGTGCGGG < 41bp 0.719803081339866 0.511550257892392 0.227294 0.094760776 prediction 0.416505646894946 Functional Loss - FAM173A ENSG00000103254 CDS Human protein_coding chr16:771423 chr16:771425 synonymous SNV . 0 23 hm5C_associated_SNPs_91367 0 0 4 DDX3X POSTAR2 ENCODE chr16:771398-771436
64251 chr16 68087555 68087555 1 + G A COAD 68087552 + 68087532 68087572 41 GAGCAGAACAGGGTGGTCTTCCAGATGGTGAGAGACTCCAT GAGCAGAACAGGGTGGTCTTCCAAATGGTGAGAGACTCCAT < 41bp 0.806969178178564 0.598718667455513 0.8008251 0.8430396 prediction 0.416501021446102 Functional Loss - DUS2 ENSG00000167264 CDS Human protein_coding chr16:68087552 chr16:68087555 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_91368 0 0 3 PPIG POSTAR2 ENCODE chr16:68087509-68087581
64251 chr19 54627955 54627955 1 + C T STAD 54627953 + 54627933 54627973 41 GCTCGGGGCCCAGCGCAAGACGCTGTCGGGCTTCTCGTCTA GCTCGGGGCCCAGCGCAAGACGTTGTCGGGCTTCTCGTCTA < 41bp 0.859625786770698 0.651380328458942 0.107053965 0.102093905 prediction 0.416490916623513 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54627953 chr19:54627955 synonymous SNV . 0 23 hm5C_associated_SNPs_91374 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:54627949-54627984
64251 chr17 41165172 41165172 1 + C T UCEC 41165169 + 41165149 41165189 41 ATTTGCGGATCCACTGCCCTCTGCTTGCGGGCTCTGCTCTG ATTTGCGGATCCACTGCCCTCTGTTTGCGGGCTCTGCTCTG < 41bp 0.747487699760378 0.539242257947071 0.07101548 0.037534356 prediction 0.416490883626613 Functional Loss - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41165169 chr17:41165172 nonsynonymous SNV 0.761 1 24 hm5C_associated_SNPs_91375 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41165151-41165173
64251 chr6 151779592 151779592 1 + G A LUAD 151779589 + 151779569 151779609 41 CTGATATATGGAATCAGTACCTAGAATATCAACAGAGTCTT CTGATATATGGAATCAGTACCTAAAATATCAACAGAGTCTT < 41bp 0.768562685690899 0.560322755925032 0.020602256 0.030908972 prediction 0.416479859531733 Functional Loss - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151779589 chr6:151779592 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_91377 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:151779575-151779606
64251 chr2 207482312 207482312 1 + G A SKCM 207482309 + 207482289 207482329 41 ACTCACTCTGGAAGAAATGTCAAGAAGAGAAGGTTCGATCC ACTCACTCTGGAAGAAATGTCAAAAAGAGAAGGTTCGATCC < 41bp 0.772762873058427 0.564526988560262 0.19789028 0.08708981 prediction 0.416471768996331 Functional Loss - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207482309 chr2:207482312 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_91382 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:207482311-207482312
64251 chr16 19590381 19590381 1 + T C UCEC 19590380 + 19590360 19590400 41 TTCATTCTGTTTAGGCAAAGCTGGGACTGCCACATTGGCAA TTCATTCTGTTTAGGCAAAGCCGGGACTGCCACATTGGCAA < 41bp 0.810178374479454 0.601944736510357 0.26327667 0.53020483 prediction 0.416467275938194 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19590380 chr16:19590381 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_91384 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:19590374-19590396
64251 chr6 160184041 160184041 1 + C T UCEC 160184038 + 160184018 160184058 41 CTTGAAGAGGGCCACTGTGGCTCCGGAAGATGTGTCTGAGG CTTGAAGAGGGCCACTGTGGCTCTGGAAGATGTGTCTGAGG < 41bp 0.789586445933464 0.581355106588305 0.23936981 0.15203625 prediction 0.416462678690317 Functional Loss - ACAT2 ENSG00000120437 CDS Human protein_coding chr6:160184038 chr6:160184041 nonsynonymous SNV 0.305 4 24 hm5C_associated_SNPs_91385 0 0 8 DDX3X POSTAR2 ENCODE chr6:160184017-160184063
64251 chr19 10398442 10398442 1 + A T GBM 10398438 + 10398418 10398458 41 CCCCGCGACTTCTGGCAGCCCGTGATCTGCCACGCGCGCCT CCCCGCGACTTCTGGCAGCCCGTGTTCTGCCACGCGCGCCT < 41bp 0.894434530101094 0.686207692873358 0.39520472 0.27481806 prediction 0.416453674455471 Functional Loss - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398438 chr19:10398442 nonsynonymous SNV 0.248 1 25 hm5C_associated_SNPs_91394 0 0 1 SND1 POSTAR2 ENCODE chr19:10398393-10398459
64251 chr19 7975940 7975940 1 + C T ACC 7975937 + 7975917 7975957 41 ACGTCAAGCCCTCCAACATCCTGCTGGACGAGCGGGGCCAG ACGTCAAGCCCTCCAACATCCTGTTGGACGAGCGGGGCCAG < 41bp 0.7082243614669 0.490162188404589 0.029548645 0.024526775 prediction 0.4164487229338 Functional Loss - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7975937 chr19:7975940 synonymous SNV . 0 24 hm5C_associated_SNPs_91395 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:7975920-7975940
64251 chr17 4846211 4846211 1 + C T UCEC 4846208 + 4846188 4846228 41 GGGAGAGAAGCTCCGAGTACCTGCGTGCCCTCTTTGTCTAC GGGAGAGAAGCTCCGAGTACCTGTGTGCCCTCTTTGTCTAC < 41bp 0.737230221780819 0.529008960650866 0.05379367 0.036031753 prediction 0.416442522259907 Functional Loss - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846208 chr17:4846211 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91398 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4846182-4846215
64251 chr9 133493263 133493263 1 + G T BRCA 133493260 + 133493240 133493280 41 AGACAAGCCTCTTCGTATCACTGGAGATGCATTTAAAGTAC AGACAAGCCTCTTCGTATCACTGTAGATGCATTTAAAGTAC < 41bp 0.936158209503944 0.727937759539659 0.36074093 0.05951518 prediction 0.41644089992857 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133493260 chr9:133493263 nonsynonymous SNV 0.993 5 24 hm5C_associated_SNPs_91399 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133493254-133493273
64251 chr1 33236931 33236931 1 + G T BLCA 33236929 + 33236909 33236949 41 CCCAGACAACCTTGACTCCACTGCAGGAGTCTCCTGTCATC CCCAGACAACCTTGACTCCACTTCAGGAGTCTCCTGTCATC < 41bp 0.708219339089313 0.367529032616675 0.08594626 0.07924414 prediction 0.416438678178626 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33236929 chr1:33236931 synonymous SNV . 0 23 hm5C_associated_SNPs_91402 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:33236920-33236940
64251 chr12 57911160 57911160 1 - G A rs697221 57911163 - 57911143 57911183 41 GCTGAGTCATTGCCTTTCTCCTTCGGGACACTGTCCAGCTG GCTGAGTCATTGCCTTTCTCCTTTGGGACACTGTCCAGCTG < 41bp 0.762547980253312 0.554331209016813 0.046797454 0.064477235 prediction 0.416433542472998 Functional Loss - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911163 chr12:57911160 synonymous SNV 0.981 0 24 hm5C_associated_SNPs_91405 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:57911145-57911171
64251 chr19 11978322 11978322 1 + G T STAD 11978319 + 11978299 11978339 41 ATCAGAGGTGACACTGGACACAAGGCATGTGAATGTCAGGA ATCAGAGGTGACACTGGACACAATGCATGTGAATGTCAGGA < 41bp 0.708214894017679 0.328622954456932 0.07496637 0.0082062185 prediction 0.416429788035358 Functional Loss - ZNF439 ENSG00000171291 CDS Human protein_coding chr19:11978319 chr19:11978322 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_91408 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:11978295-11978322
64251 chr22 44379853 44379853 1 + A C UCEC 44379849 + 44379829 44379869 41 CCCACAAGCATCCGCGGATTCAGCATGCACAGCATCGGGCC CCCACAAGCATCCGCGGATTCAGCCTGCACAGCATCGGGCC < 41bp 0.949065692101432 0.740852382719304 0.31389272 0.11996287 prediction 0.416426618764257 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44379849 chr22:44379853 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_91410 0 0 3 PPIG POSTAR2 ENCODE chr22:44379812-44379870
64251 chr15 59373269 59373269 1 + C T ESCA 59373267 + 59373247 59373287 41 TCCTGTACATGCTTTCCATTCTCAAATATCTTCTCATGCAA TCCTGTACATGCTTTCCATTCTTAAATATCTTCTCATGCAA < 41bp 0.708209969533321 0.405358133486708 0.3089792 0.051617146 prediction 0.416419939066641 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59373267 chr15:59373269 stopgain 0.998 1 23 hm5C_associated_SNPs_91414 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr15:59373257-59373282
64251 chr11 44102744 44102744 1 + G T LUSC 44102742 + 44102722 44102762 41 CCTGCAGGACTTCGGGATGTCTGGGCTCCGCTTTGGCACGC CCTGCAGGACTTCGGGATGTCTTGGCTCCGCTTTGGCACGC < 41bp 0.916262860020523 0.708053904516537 0.90849537 0.123728424 prediction 0.416417911007972 Functional Loss - ACCS ENSG00000110455 CDS Human protein_coding chr11:44102742 chr11:44102744 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_91415 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:44102676-44102758
64251 chr19 17337656 17337656 1 + A C rs200411700 17337655 + 17337635 17337675 41 CCCGGGGGCACCTGCATACTCACCCGCCTGGGCCTGGGCCC CCCGGGGGCACCTGCATACTCCCCCGCCTGGGCCTGGGCCC < 41bp 0.829367206254109 0.621160453402183 0.3372783 0.114732176 prediction 0.416413505703852 Functional Loss - OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337655 chr19:17337656 nonsynonymous SNV 0.057 1 22 hm5C_associated_SNPs_91417 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:17337648-17337678
64251 chrX 48382174 48382174 1 + G A rs3048 48382171 + 48382151 48382191 41 CACAAAGACATGACTACCAACGCGGGCCCCTTGCACCCATA CACAAAGACATGACTACCAACGCAGGCCCCTTGCACCCATA < 41bp 0.809535983550519 0.601334100811661 0.78991413 0.3887841 prediction 0.416403765477716 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48382171 chrX:48382174 synonymous SNV . 0 24 hm5C_associated_SNPs_91422 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48382139-48382185
64251 chr22 24237116 24237116 1 + G C CESC 24237112 + 24237092 24237132 41 GCGGCCTGCTGGCCGAGCGCCTGCGCATCAGCCCGGACAGG GCGGCCTGCTGGCCGAGCGCCTGCCCATCAGCCCGGACAGG < 41bp 0.708201581321356 0.429123668346915 0.17680648 0.2642907 prediction 0.416403162642713 Functional Loss - MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237112 chr22:24237116 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_91423 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:24236956-24237127
64251 chr1 45223725 45223725 1 + G T LUAD 45223721 + 45223701 45223741 41 AGCAAAGTTCTCTCCCTCAGCCCGGGACGTCTTCCTCCTGA AGCAAAGTTCTCTCCCTCAGCCCGTGACGTCTTCCTCCTGA < 41bp 0.708197224535795 0.491922707276662 0.30155003 0.13159055 prediction 0.416394449071591 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45223721 chr1:45223725 synonymous SNV . 0 25 hm5C_associated_SNPs_91427 0 0 7 EFTUD2 POSTAR2 ENCODE chr1:45223712-45223745
64251 chr12 56733621 56733621 1 + G T KIRC 56733619 + 56733599 56733639 41 TGGGCCTCAGCCAACTCCTGCAGGTATGAAGTAGGGGCGTG TGGGCCTCAGCCAACTCCTGCATGTATGAAGTAGGGGCGTG < 41bp 0.708195495894846 0.34772789950883 0.8559768 0.39573878 prediction 0.416390991789693 Functional Loss - IL23A ENSG00000110944 CDS Human protein_coding chr12:56733619 chr12:56733621 nonsynonymous SNV 0.985 1 23 hm5C_associated_SNPs_91430 0 0 4 DDX6 POSTAR2 ENCODE chr12:56733607-56733622
64251 chr14 24035346 24035346 1 - C T BRCA 24035349 - 24035329 24035369 41 GCTATTCTGACTGCAGTGCACATGATCCGGAAGGTCCCTGA GCTATTCTGACTGCAGTGCACATAATCCGGAAGGTCCCTGA < 41bp 0.740515495058324 0.532320008122062 0.28990415 0.21647483 prediction 0.416390973872526 Functional Loss - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24035349 chr14:24035346 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_91431 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:24035335-24035355
64251 chr9 37762066 37762066 1 + G A rs376110227 37762063 + 37762043 37762083 41 CTGCAGATCGATGCGGAAGGCGAGTGCCAGGAGGGAGAGAT CTGCAGATCGATGCGGAAGGCGAATGCCAGGAGGGAGAGAT < 41bp 0.708195042539211 0.468317298842694 0.7478594 0.609307 prediction 0.416390085078423 Functional Loss - TRMT10B ENSG00000165275 CDS Human protein_coding chr9:37762063 chr9:37762066 synonymous SNV . 0 24 hm5C_associated_SNPs_91432 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr9:37762048-37762078
64251 chr3 45533224 45533224 1 + G A rs2128361 45533221 + 45533201 45533241 41 CCTGTGACCCTGCCCAACATCGCGTCTTTCACTGGCAAGGG CCTGTGACCCTGCCCAACATCGCATCTTTCACTGGCAAGGG < 41bp 0.828690881928626 0.620500426199969 0.2678632 0.14671838 prediction 0.416380911457315 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45533221 chr3:45533224 synonymous SNV . 0 24 hm5C_associated_SNPs_91433 1 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr3:45533220-45533240
64251 chr19 1393355 1393355 1 - G A ESCA 1393357 - 1393337 1393377 41 CTGGCCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGTCCCG CTGGCCCTGTCTCCAGCTCCCTTGTGGGCGGTGCGGTCCCG < 41bp 0.806739013512835 0.598553071063682 0.052835077 0.10648364 prediction 0.416371884898306 Functional Loss - NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1393357 chr19:1393355 synonymous SNV . 0 23 hm5C_associated_SNPs_91436 0 0 1 EIF3H POSTAR2 ENCODE chr19:1393317-1393370
64251 chr17 80678199 80678199 1 + G A PRAD 80678196 + 80678176 80678216 41 GCCGATTTACACCTTGATAACAAGAAGCTTGGAGAGATGCG GCCGATTTACACCTTGATAACAAAAAGCTTGGAGAGATGCG < 41bp 0.819393348715027 0.611208899402238 0.67428124 0.19146094 prediction 0.416368898625577 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80678196 chr17:80678199 synonymous SNV . 0 24 hm5C_associated_SNPs_91438 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:80678195-80678218
64251 chr18 2608738 2608738 1 + G A BLCA 2608735 + 2608715 2608755 41 ATGAAAAATGTGCCAGTGAGCTTGAGTCCTTGGAGAAACAC ATGAAAAATGTGCCAGTGAGCTTAAGTCCTTGGAGAAACAC < 41bp 0.762384810290984 0.5542011636305 0.14636523 0.1895844 prediction 0.416367293320967 Functional Loss - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2608735 chr18:2608738 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_91440 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr18:2608668-2608827
64251 chr16 72133714 72133714 1 + G A rs534306131 72133711 + 72133691 72133731 41 GCCTACTCCTCCGAGGACTACGTGAGGAGGCGGGAGCAGCA GCCTACTCCTCCGAGGACTACGTAAGGAGGCGGGAGCAGCA < 41bp 0.708182225863589 0.463156675002181 0.6586814 0.29447645 prediction 0.416364451727179 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72133711 chr16:72133714 synonymous SNV . 0 24 hm5C_associated_SNPs_91441 0 0 7 FMR1 POSTAR2 ENCODE chr16:72133659-72133723
64251 chr10 73122834 73122834 1 + G A rs549844465 73122831 + 73122811 73122851 41 CTCCCTGGAATGGAAGTCCCCTGGCATGGTCAGTCCTCAGG CTCCCTGGAATGGAAGTCCCCTGACATGGTCAGTCCTCAGG < 41bp 0.733280550486889 0.525101341380054 0.41831842 0.30526662 prediction 0.416358418213671 Functional Loss - SLC29A3 ENSG00000198246 UTR3 Human protein_coding chr10:73122831 chr10:73122834 . . 0 24 hm5C_associated_SNPs_91445 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163974 chr10:73122834-73122835
64251 chr20 52831931 52831931 1 + C T SKCM 52831928 + 52831908 52831948 41 CCTTATCAAATTGGTGATGTCTTCATTAGCCATTCTCAAGA CCTTATCAAATTGGTGATGTCTTTATTAGCCATTCTCAAGA < 41bp 0.777732431894485 0.569554938007432 0.66321397 0.086443156 prediction 0.416354987774106 Functional Loss - PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52831928 chr20:52831931 synonymous SNV . 0 24 hm5C_associated_SNPs_91448 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:52831900-52831940
64251 chr11 118518706 118518706 1 + G A UCEC 118518703 + 118518683 118518723 41 AGGAGCGGCGGAGGCGTGAGCAGGTAGAACGGAGGCTGCAG AGGAGCGGCGGAGGCGTGAGCAGATAGAACGGAGGCTGCAG < 41bp 0.798897408101346 0.590723492087552 0.9016026 0.88753545 prediction 0.416347832027588 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118518703 chr11:118518706 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_91450 0 0 9 BUD13 POSTAR2 ENCODE chr11:118518637-118518749
64251 chr11 62556780 62556780 1 + C T UCEC 62556777 + 62556757 62556797 41 CTTTCAGAGGTGCTATAGGGCTGCGCATTGCACTGGCCATC CTTTCAGAGGTGCTATAGGGCTGTGCATTGCACTGGCCATC < 41bp 0.708386270252024 0.500214700295621 0.071020395 0.06003332 prediction 0.416343139912806 Functional Loss - TMEM179B ENSG00000185475 CDS Human protein_coding chr11:62556777 chr11:62556780 nonsynonymous SNV 0.841 0 24 hm5C_associated_SNPs_91451 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62556770-62556791
64251 chr10 121429597 121429597 1 + C T OV 121429594 + 121429574 121429614 41 CTCAGAGGTCCCAGTCACCTCTGCGGGGCATGCCAGAAACC CTCAGAGGTCCCAGTCACCTCTGTGGGGCATGCCAGAAACC < 41bp 0.753865056568417 0.545694973667728 0.21330357 0.1051622 prediction 0.416340165801379 Functional Loss - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121429594 chr10:121429597 nonsynonymous SNV 0.164 2 24 hm5C_associated_SNPs_91453 5 0 1 TARBP2 POSTAR2 GSE49648,GSM1204358 chr10:121429580-121429600
64251 chr2 58276079 58276079 1 + G A ESCA 58276076 + 58276056 58276096 41 ACTGGGCAAGAAGATTGGCTCTGGAGGATTTGGATTGATAT ACTGGGCAAGAAGATTGGCTCTGAAGGATTTGGATTGATAT < 41bp 0.742881328797954 0.534711337588621 0.76562405 0.2612961 prediction 0.416339982418666 Functional Loss - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58276076 chr2:58276079 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91454 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:58276062-58276083
64251 chr7 889631 889631 1 + G A rs200884716 889628 + 889608 889648 41 ACTCGCAGTCGCCACGGCTGCCCGGTCGGGCAGGGACCCTC ACTCGCAGTCGCCACGGCTGCCCAGTCGGGCAGGGACCCTC < 41bp 0.79724360794336 0.58909691293603 0.1323838 0.053921103 prediction 0.416293390014659 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:889628 chr7:889631 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_91467 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:889599-889632
64251 chr19 44352416 44352416 1 + G T LUAD 44352413 + 44352393 44352433 41 AATGTGGGAAGGCTTTTAGTCGTGGCTATCACCTTACTCAA AATGTGGGAAGGCTTTTAGTCGTTGCTATCACCTTACTCAA < 41bp 0.708145682132209 0.311446981758942 0.8411728 0.079428285 prediction 0.416291364264417 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352413 chr19:44352416 nonsynonymous SNV 0.754 1 24 hm5C_associated_SNPs_91468 0 0 2 TAF15 POSTAR2 SRX029346 chr19:44352400-44352420
64251 chr8 27296601 27296601 1 + G T LUAD 27296597 + 27296577 27296617 41 CCTCCCCTGAGTGTGTGAAGCTGGGGGACTTTGGTCTTTCC CCTCCCCTGAGTGTGTGAAGCTGGTGGACTTTGGTCTTTCC < 41bp 0.724196516693091 0.516059848554385 0.8913932 0.42097366 prediction 0.416273336277411 Functional Loss - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27296597 chr8:27296601 nonsynonymous SNV 0.990 5 25 hm5C_associated_SNPs_91473 0 0 2 UCHL5 POSTAR2 ENCODE chr8:27296563-27296616
64251 chr15 45713259 45713259 1 + C T UCEC 45713256 + 45713236 45713276 41 AATAGGCTGCTTTGCTGGCTCTGCAAGAAAATGGACTAGAC AATAGGCTGCTTTGCTGGCTCTGTAAGAAAATGGACTAGAC < 41bp 0.763120195534648 0.55500204136923 0.85249054 0.32006148 prediction 0.416236308330837 Functional Loss - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45713256 chr15:45713259 stopgain 0.995 0 24 hm5C_associated_SNPs_91485 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:45713250-45713300
64251 chr10 126631521 126631521 1 + G A UCEC 126631518 + 126631498 126631538 41 CTGAACACTAGGACACAGCACTGGACTTGCTCTGTTTGCAC CTGAACACTAGGACACAGCACTGAACTTGCTCTGTTTGCAC < 41bp 0.708114002523175 0.483948638379843 0.2498267 0.09847945 prediction 0.41622800504635 Functional Loss - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126631518 chr10:126631521 stopgain 1.000 1 24 hm5C_associated_SNPs_91486 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:126631472-126631544
64251 chrX 48678522 48678522 1 + G T UCEC 48678520 + 48678500 48678540 41 CTCCCTGCCTCAGTTTAACCCAGAACTGGTGCTGGTCTCAG CTCCCTGCCTCAGTTTAACCCATAACTGGTGCTGGTCTCAG < 41bp 0.708113204880778 0.360888333362049 0.28978223 0.13271579 prediction 0.416226409761555 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678520 chrX:48678522 stopgain 0.999 0 23 hm5C_associated_SNPs_91487 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48678516-48678546
64251 chr17 73812946 73812946 1 + T C UCEC 73812945 + 73812925 73812965 41 ATGCCATCTGCCGCCGGAGACTCGGTGCCTGTGAGCCCCTC ATGCCATCTGCCGCCGGAGACCCGGTGCCTGTGAGCCCCTC < 41bp 0.847100702264402 0.638987654791943 0.35617712 0.33972603 prediction 0.416226094944918 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73812945 chr17:73812946 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_91488 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:73812943-73812962
64251 chr16 3109032 3109032 1 + G A rs7188234 3109029 + 3109009 3109049 41 GTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCTCCCA GTGCGAGCTCAACCAGGCCGCAGAACGTTGGCCTGCTCCCA < 41bp 0.81062491514615 0.60251602399318 0.5548699 0.23943669 prediction 0.416217782305938 Functional Loss - MMP25 ENSG00000008516 CDS Human protein_coding chr16:3109029 chr16:3109032 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_91492 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:3109019-3109048
64251 chr19 1394833 1394833 1 - C T rs563204756 1394836 - 1394816 1394856 41 TTGAGCAAGAGGACGAAGCCCAGGGCCCAACGGGGACAGCA TTGAGCAAGAGGACGAAGCCCAGAGCCCAACGGGGACAGCA < 41bp 0.708106628704725 0.478940211675048 0.7688945 0.2672075 prediction 0.416213257409449 Functional Loss - NDUFS7 ENSG00000248015 ncRNA_exonic Human antisense chr19:1394836 chr19:1394833 . . 0 24 hm5C_associated_SNPs_91495 0 0 1 PPIG POSTAR2 ENCODE chr19:1394809-1394870
64251 chr15 41192187 41192187 1 + G A UCEC 41192184 + 41192164 41192204 41 AGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGA AGCGGGCTGTCTTCCGCTACCACATGCAACGGGAGGCCCGA < 41bp 0.816564495912439 0.608459701229359 0.22559142 0.4461925 prediction 0.41620958936616 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192184 chr15:41192187 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_91496 0 0 1 FMR1 POSTAR2 ENCODE chr15:41192173-41192226
64251 chr2 219114119 219114119 1 + C T SKCM 219114117 + 219114097 219114137 41 TCGTCACACCAATGCCAGTGCTCGAGACAACACCATCAACC TCGTCACACCAATGCCAGTGCTTGAGACAACACCATCAACC < 41bp 0.875442517704262 0.667339283311968 0.100771874 0.06178978 prediction 0.416206468784587 Functional Loss - ARPC2 ENSG00000163466 CDS Human protein_coding chr2:219114117 chr2:219114119 stopgain 0.966 1 23 hm5C_associated_SNPs_91498 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:219114100-219114120
64251 chr3 19992420 19992420 1 + C T SKCM 19992417 + 19992397 19992437 41 AGTCGAGGCGCAACAAGACCCAACGGGCCAAATACGGGAAA AGTCGAGGCGCAACAAGACCCAATGGGCCAAATACGGGAAA < 41bp 0.728604612777348 0.520502950437442 0.06883153 0.15868586 prediction 0.416203324679811 Functional Loss - RAB5A ENSG00000144566 CDS Human protein_coding chr3:19992417 chr3:19992420 synonymous SNV . 0 24 hm5C_associated_SNPs_91499 0 0 3 RBM15 POSTAR2 ENCODE chr3:19992379-19992428
64251 chr2 202131315 202131315 1 + G T PAAD 202131312 + 202131292 202131332 41 ACTACATTCCGCAAAGGAAGCAAGAACCCATCAAGGATGCC ACTACATTCCGCAAAGGAAGCAATAACCCATCAAGGATGCC < 41bp 0.708100385550488 0.368521707348107 0.09087676 0.15339634 prediction 0.416200771100975 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131312 chr2:202131315 stopgain 0.745 1 24 hm5C_associated_SNPs_91501 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:202131312-202131339
64251 chr4 166996085 166996085 1 + G A rs115884871 166996082 + 166996062 166996102 41 TGTCAGCACGAATGTGTCAACACGATGGGGAGCTACATGTG TGTCAGCACGAATGTGTCAACACAATGGGGAGCTACATGTG < 41bp 0.782718830388054 0.5746202846292 0.30607843 0.18505281 prediction 0.416197091517708 Functional Loss - TLL1 ENSG00000038295 CDS Human protein_coding chr4:166996082 chr4:166996085 synonymous SNV . 0 24 hm5C_associated_SNPs_91506 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:166996084-166996119
64251 chr3 128077137 128077137 1 + G A SKCM 128077134 + 128077114 128077154 41 ATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCACTGG ATCCAGCTCTTCGTGGGGCTCAAAGTGCACTTGTCCACTGG < 41bp 0.793515639016278 0.585420471298658 0.46194056 0.075014174 prediction 0.416190335435241 Functional Loss - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:128077134 chr3:128077137 synonymous SNV . 0 24 hm5C_associated_SNPs_91512 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:128077113-128077138
64251 chr1 154296214 154296214 1 + C T BLCA 154296212 + 154296192 154296232 41 GTGCCAACTGCGGGATTCCACTCAACCCTGCCCGGGACCTG GTGCCAACTGCGGGATTCCACTTAACCCTGCCCGGGACCTG < 41bp 0.86899046205376 0.660896991154272 0.10919118 0.10900447 prediction 0.416186941798977 Functional Loss - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154296212 chr1:154296214 synonymous SNV . 0 23 hm5C_associated_SNPs_91514 0 0 1 DDX24 POSTAR2 ENCODE chr1:154296160-154296223
64251 chr22 31654293 31654293 1 + G A rs35923988 31654290 + 31654270 31654310 41 CTTTCAGGTGTTCAGAATGCCAGGATTCCCTCACCAACTGG CTTTCAGGTGTTCAGAATGCCAGAATTCCCTCACCAACTGG < 41bp 0.811212777944439 0.603121076073665 0.810801 0.43691096 prediction 0.416183403741546 Functional Loss - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31654290 chr22:31654293 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91517 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:31654274-31654299
64251 chr3 142499733 142499733 1 + A C PRAD 142499732 + 142499712 142499752 41 GTTTGCTAAGGATTTACTTGCACAAGCCCGGAATTCTCGTG GTTTGCTAAGGATTTACTTGCCCAAGCCCGGAATTCTCGTG < 41bp 0.708090802034568 0.449265367145402 0.124465466 0.05513531 prediction 0.416181604069136 Functional Loss - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142499732 chr3:142499733 synonymous SNV . 0 22 hm5C_associated_SNPs_91521 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:142499719-142499742
64251 chr5 74655871 74655871 1 + G A UCEC 74655868 + 74655848 74655888 41 GGAAAATGCCCGGCAGCTTGCCCGAATTGTGTGTGGGACCG GGAAAATGCCCGGCAGCTTGCCCAAATTGTGTGTGGGACCG < 41bp 0.795721677654472 0.587638251115254 0.0247432 0.021028697 prediction 0.416166853078437 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74655868 chr5:74655871 nonsynonymous SNV 0.958 1 24 hm5C_associated_SNPs_91525 0 0 10 CELF2 POSTAR2 GSE71264,GSM1831617 chr5:74655860-74655880
64251 chr13 113975904 113975904 1 + C T PAAD 113975901 + 113975881 113975921 41 TTAAAGCTGCCAACGGCTCCCTGCGAGCGCTGCAGGCCACA TTAAAGCTGCCAACGGCTCCCTGTGAGCGCTGCAGGCCACA < 41bp 0.746437690195442 0.538354530385892 0.051281244 0.019119173 prediction 0.4161663196191 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113975901 chr13:113975904 stopgain 0.004 0 24 hm5C_associated_SNPs_91526 0 0 6 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr13:113975892-113975913
64251 chr5 10254913 10254913 1 + G T LGG 10254911 + 10254891 10254931 41 TGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAGAT TGGTGGAACTGTCCAAGTCTCATGATGATGAAATTGGAGAT < 41bp 0.900287718862119 0.692206880361301 0.87994266 0.33682966 prediction 0.416161677001635 Functional Loss - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10254911 chr5:10254913 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_91529 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:10254819-10254950
64251 chr11 67075683 67075683 1 + C T SKCM 67075681 + 67075661 67075701 41 AGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTC AGCTGCGCCTGGGGCTCCCCCTTCAGCAGTACCGTGACTTC < 41bp 0.877685667654766 0.66960700797235 0.94088936 0.06950745 prediction 0.416157319364833 Functional Loss - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075681 chr11:67075683 synonymous SNV . 0 23 hm5C_associated_SNPs_91531 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67075651-67075708
64251 chr19 39395730 39395730 1 + G T UCEC 39395726 + 39395706 39395746 41 TCTAGGCTTCTCGGCCGGCACTGAGTACATGGACCTGCAGA TCTAGGCTTCTCGGCCGGCACTGATTACATGGACCTGCAGA < 41bp 0.708065653320246 0.499983325130877 0.18259415 0.15473783 prediction 0.416131306640492 Functional Loss - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395726 chr19:39395730 nonsynonymous SNV 0.842 1 25 hm5C_associated_SNPs_91542 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39395677-39395739
64251 chr9 35753231 35753231 1 + C T LUSC 35753229 + 35753209 35753249 41 GAGAACTGGCAGGTTCCTGCCTCCTGACGTACCTCACACCC GAGAACTGGCAGGTTCCTGCCTTCTGACGTACCTCACACCC < 41bp 0.708063505893934 0.478153188888434 0.15413755 0.10570499 prediction 0.416127011787868 Functional Loss - MSMP ENSG00000215183 CDS Human protein_coding chr9:35753229 chr9:35753231 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_91544 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:35753206-35753237
64251 chr1 210012467 210012467 1 + A C rs143030946 210012466 + 210012446 210012486 41 GGCAATATTGATGACCACTTCAGGATTGGTAATTCTTCCTT GGCAATATTGATGACCACTTCCGGATTGGTAATTCTTCCTT < 41bp 0.836005493848004 0.627949141092594 0.61122954 0.3887578 prediction 0.41611270551082 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210012466 chr1:210012467 synonymous SNV . 0 22 hm5C_associated_SNPs_91549 0 0 1 UCHL5 POSTAR2 ENCODE chr1:210012371-210012468
64251 chrX 54836183 54836183 1 + C T UCEC 54836181 + 54836161 54836201 41 GCTTCAGAAAAGGACAGTAGCTCGATGATGCAGACTCTGTT GCTTCAGAAAAGGACAGTAGCTTGATGATGCAGACTCTGTT < 41bp 0.868937251139873 0.660881472015918 0.3308182 0.15020755 prediction 0.416111558247911 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836181 chrX:54836183 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_91550 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54836165-54836186
64251 chr12 122618285 122618285 1 + G A BLCA 122618282 + 122618262 122618302 41 CGGCCTCTGCCACCCTCACCCACGATGCCCCCGCCACCACC CGGCCTCTGCCACCCTCACCCACAATGCCCCCGCCACCACC < 41bp 0.835585584883615 0.627532662603118 0.35430515 0.15182045 prediction 0.416105844560995 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122618282 chr12:122618285 nonsynonymous SNV 0.637 1 24 hm5C_associated_SNPs_91552 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122618264-122618298
64251 chr1 29069012 29069012 1 + C T STAD 29069009 + 29068989 29069029 41 TTTGGGTGAAGCTGCTTGGTCTACGGGGGGTGACACAGCCA TTTGGGTGAAGCTGCTTGGTCTATGGGGGGTGACACAGCCA < 41bp 0.746914232299116 0.538861759671469 0.48654443 0.26416057 prediction 0.416104945255295 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069009 chr1:29069012 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_91554 0 0 22 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29068920-29069020
64251 chr19 16222762 16222762 1 + G A SARC 16222759 + 16222739 16222779 41 AAGCTGCTGCTGATCGGGGACTCGGGGGTGGGGAAGACCTG AAGCTGCTGCTGATCGGGGACTCAGGGGTGGGGAAGACCTG < 41bp 0.708051974034118 0.473238648641462 0.5489307 0.4385904 prediction 0.416103948068236 Functional Loss - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16222759 chr19:16222762 synonymous SNV . 0 24 hm5C_associated_SNPs_91555 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:16222744-16222771
64251 chr16 66586678 66586678 1 + C T CESC 66586676 + 66586656 66586696 41 TCTGCTTCAGTGTGAAAGGCCACGTGAAGATGCTGCGGCTG TCTGCTTCAGTGTGAAAGGCCATGTGAAGATGCTGCGGCTG < 41bp 0.801929708225091 0.593879113012296 0.18349278 0.19195297 prediction 0.41610119042559 Functional Loss - CKLF;CKLF-CMTM1 ENSG00000217555;ENSG00000254788 CDS Human other chr16:66586676 chr16:66586678 synonymous SNV . 0 23 hm5C_associated_SNPs_91556 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:66586642-66586679
64251 chr16 30081257 30081257 1 + C T UCEC 30081254 + 30081234 30081274 41 CCCTGGGCCCTGACCTTCTCCTACGGCCGAGCCCTGCAGGC CCCTGGGCCCTGACCTTCTCCTATGGCCGAGCCCTGCAGGC < 41bp 0.73844916166648 0.530398607874023 0.07153946 0.090884745 prediction 0.416101107584913 Functional Loss - ALDOA ENSG00000149925 CDS Human protein_coding chr16:30081254 chr16:30081257 synonymous SNV . 0 24 hm5C_associated_SNPs_91557 1 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30081160-30081260
64251 chr2 231947609 231947609 1 + G A HNSC 231947606 + 231947586 231947626 41 TTTTTCCTTAGATCGTTAGACACGGTGGCAGTCTGGGCCTT TTTTTCCTTAGATCGTTAGACACAGTGGCAGTCTGGGCCTT < 41bp 0.792783186878662 0.584738768578913 0.44783854 0.28235787 prediction 0.416088836599498 Functional Loss - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231947606 chr2:231947609 nonsynonymous SNV 0.870 4 24 hm5C_associated_SNPs_91560 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr2:231947600-231947620
64251 chr12 64873834 64873834 1 + A C LUSC 64873830 + 64873810 64873850 41 AAAGCCTTCTGGTGCAATATCTGGAGTACAGAAAGCAGAAA AAAGCCTTCTGGTGCAATATCTGGCGTACAGAAAGCAGAAA < 41bp 0.943078775096714 0.735034473418994 0.61057997 0.6640313 prediction 0.416088603355439 Functional Loss - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64873830 chr12:64873834 synonymous SNV . 0 25 hm5C_associated_SNPs_91561 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:64873827-64873857
64251 chr7 6189775 6189775 1 + G A READ 6189772 + 6189752 6189792 41 AAGATGAGGAGGCCACTCCGCACGAGCTTCAAGAACCCATG AAGATGAGGAGGCCACTCCGCACAAGCTTCAAGAACCCATG < 41bp 0.818507716507966 0.610474759710134 0.18667224 0.1457943 prediction 0.416065913595664 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6189772 chr7:6189775 nonsynonymous SNV 0.085 2 24 hm5C_associated_SNPs_91566 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:6189763-6189801
64251 chr10 22608986 22608986 1 + A C rs151178813 22608985 + 22608965 22609005 41 AACCAGAAACGCCTTGCCTTCAGCTGAACCACCGTTTGTGC AACCAGAAACGCCTTGCCTTCCGCTGAACCACCGTTTGTGC < 41bp 0.708016776669519 0.436482814856483 0.74633837 0.22376198 prediction 0.416033553339039 Functional Loss - COMMD3 ENSG00000148444 CDS Human protein_coding chr10:22608985 chr10:22608986 unknown . 0 22 hm5C_associated_SNPs_91577 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:22608980-22609019
64251 chr2 54880898 54880898 1 + A C rs2271328 54880897 + 54880877 54880917 41 CAGGGTGCGGCTGGTGGACACAGGGGACAAGTTCCGCTTCT CAGGGTGCGGCTGGTGGACACCGGGGACAAGTTCCGCTTCT < 41bp 0.820829918780626 0.612816032563203 0.9274665 0.9208698 prediction 0.416027772434847 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54880897 chr2:54880898 synonymous SNV . 0 22 hm5C_associated_SNPs_91580 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr2:54880880-54880900
64251 chr12 120878361 120878361 1 + C T rs140777141 120878359 + 120878339 120878379 41 AAAGAGAATCTGGACCACTACCCGGGCACCAGGGACCACAG AAAGAGAATCTGGACCACTACCTGGGCACCAGGGACCACAG < 41bp 0.824766495037286 0.616755770471657 0.82698715 0.27609152 prediction 0.416021449131258 Functional Loss - COX6A1 ENSG00000111775 UTR3 Human protein_coding chr12:120878359 chr12:120878361 . . 0 23 hm5C_associated_SNPs_91581 0 0 30 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:120878344-120878401
64251 chr16 88071599 88071599 1 + C T UCEC 88071597 + 88071577 88071617 41 AGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGGTCAG AGGGCAACCTCCAGATCCATCATGTGGGGCAGGACGGTCAG < 41bp 0.708009410136359 0.438934386819034 0.7036127 0.63266855 prediction 0.416018820272718 Functional Loss - BANP ENSG00000172530 CDS Human protein_coding chr16:88071597 chr16:88071599 synonymous SNV . 0 23 hm5C_associated_SNPs_91582 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88071597-88071619
64251 chr5 140627140 140627140 1 + G T rs150918916 140627138 + 140627118 140627158 41 CTGCAAGTGCTCCTGGTGGACGGCTTCTCTCAGCCCTACCT CTGCAAGTGCTCCTGGTGGACGTCTTCTCTCAGCCCTACCT < 41bp 0.708006336594487 0.358398192398682 0.3843383 0.21866336 prediction 0.416012673188974 Functional Loss - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140627138 chr5:140627140 nonsynonymous SNV 0.981 2 23 hm5C_associated_SNPs_91587 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140627101-140627158
64251 chr5 224542 224542 1 + G A SARC 224539 + 224519 224559 41 GGTGGTAGGCGCTGGAGGGGCAGGCTTGCGAGCTGCATTTG GGTGGTAGGCGCTGGAGGGGCAGACTTGCGAGCTGCATTTG < 41bp 0.829781791309136 0.621778531100238 0.8962071 0.8590666 prediction 0.416006520417797 Functional Loss - SDHA ENSG00000073578 CDS Human protein_coding chr5:224539 chr5:224542 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91588 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:224524-224548
64251 chr17 1675351 1675351 1 + G T LIHC 1675348 + 1675328 1675368 41 ATGAGATCAGCATTCTCCTTCTCGGTGTGGCGCACTTCAAG ATGAGATCAGCATTCTCCTTCTCTGTGTGGCGCACTTCAAG < 41bp 0.708001235235169 0.306768428711511 0.106048584 0.07099286 prediction 0.416002470470338 Functional Loss - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1675348 chr17:1675351 nonsynonymous SNV 0.175 5 24 hm5C_associated_SNPs_91589 0 0 3 LARP7 POSTAR2 ENCODE chr17:1675342-1675373
64251 chr6 167709557 167709557 1 + G A BRCA 167709554 + 167709534 167709574 41 CCACCTCCATACTGCTGGGACTCGGGGCCGCCCCGCTGTGG CCACCTCCATACTGCTGGGACTCAGGGCCGCCCCGCTGTGG < 41bp 0.834574471415777 0.62657561904094 0.1777961 0.025329083 prediction 0.415997704749674 Functional Loss - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167709554 chr6:167709557 nonsynonymous SNV 0.000 4 24 hm5C_associated_SNPs_91590 0 0 3 BUD13 POSTAR2 ENCODE chr6:167709505-167709586
64251 chr1 165872437 165872437 1 + A T LUAD 165872435 + 165872415 165872455 41 ACAGTATTAAGGGACATCAGCGAGAGAGGCAGGGATCTTGA ACAGTATTAAGGGACATCAGCGTGAGAGGCAGGGATCTTGA < 41bp 0.707996112693655 0.495076085001954 0.89815986 0.8550309 prediction 0.41599222538731 Functional Loss - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165872435 chr1:165872437 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_91592 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:165872420-165872440
64251 chr6 160461701 160461701 1 + C T rs200699942 160461698 + 160461678 160461718 41 AAGGAGAAGGAAGACCTCCTCTGCGGTGCCACCGACGGGAA AAGGAGAAGGAAGACCTCCTCTGTGGTGCCACCGACGGGAA < 41bp 0.739857435882856 0.531861355752022 0.5763572 0.4004799 prediction 0.415992160261668 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160461698 chr6:160461701 synonymous SNV . 0 24 hm5C_associated_SNPs_91593 0 0 5 LIN28B POSTAR2 ENCODE chr6:160461664-160461704
64251 chr8 55055318 55055318 1 + T C SARC 55055317 + 55055297 55055337 41 AAAAAATGGTGGTGTTGTTACTACAGCCTTCTATGATCCAA AAAAAATGGTGGTGTTGTTACCACAGCCTTCTATGATCCAA < 41bp 0.842916779268923 0.63493315545213 0.4033837 0.2334176 prediction 0.415967247633586 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55055317 chr8:55055318 synonymous SNV . 0 22 hm5C_associated_SNPs_91603 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr8:55055295-55055318
64251 chr3 142840664 142840664 1 + G A COAD 142840661 + 142840641 142840681 41 TCCACTTGGTGCGTGATCCCCGCGCGGTGGCGAGTTCACGG TCCACTTGGTGCGTGATCCCCGCACGGTGGCGAGTTCACGG < 41bp 0.81904237990654 0.611070791884658 0.48746017 0.39076924 prediction 0.415943176043764 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840661 chr3:142840664 nonsynonymous SNV 0.049 4 24 hm5C_associated_SNPs_91610 0 0 1 FMR1 POSTAR2 ENCODE chr3:142840661-142840686
64251 chr4 3432576 3432576 1 + C T STAD 3432574 + 3432554 3432594 41 TCCAGACGGTGGAGGATGAGCACGTGGCCGAGCTGACCCTG TCCAGACGGTGGAGGATGAGCATGTGGCCGAGCTGACCCTG < 41bp 0.807124439885951 0.599156562328757 0.62562454 0.42401898 prediction 0.415935755114389 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3432574 chr4:3432576 synonymous SNV . 0 23 hm5C_associated_SNPs_91613 0 0 1 PPIG POSTAR2 ENCODE chr4:3432575-3432646
64251 chr14 24771476 24771476 1 + G A LUSC 24771473 + 24771453 24771493 41 TCTCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGGTCC TCTCCGAGATCAGACGAGTTCCAAACTCCTGGAGCAGGTCC < 41bp 0.707966632659399 0.462072521436655 0.33526784 0.26311934 prediction 0.415933265318799 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771473 chr14:24771476 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_91616 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:24771474-24771499
64251 chr13 114193788 114193788 1 + C T UCEC 114193786 + 114193766 114193806 41 CCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTT CCACCTCCATCGAACCCATCCGTGACTTCCTGGCCATCGTT < 41bp 0.864888627481009 0.656923503534033 0.23069331 0.15550682 prediction 0.415930247893951 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114193786 chr13:114193788 synonymous SNV . 0 23 hm5C_associated_SNPs_91618 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr13:114193778-114193804
64251 chr19 12781554 12781554 1 + G C UCEC 12781550 + 12781530 12781570 41 GCTGTTGGGATTGCCGCTCACGGAGGCCTGAGCCAGTGCAG GCTGTTGGGATTGCCGCTCACGGACGCCTGAGCCAGTGCAG < 41bp 0.88775703250823 0.679795309227449 0.9214476 0.8515935 prediction 0.41592344656156 Functional Loss - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12781550 chr19:12781554 nonsynonymous SNV 0.950 0 25 hm5C_associated_SNPs_91619 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:12781531-12781557
64251 chr6 7390296 7390296 1 + T C UCEC 7390295 + 7390275 7390315 41 GGGCAATTCGACGACGCGGACTCCTCTGACAGGTAGGCGGC GGGCAATTCGACGACGCGGACCCCTCTGACAGGTAGGCGGC < 41bp 0.707961055411388 0.467298444175585 0.26632872 0.15667701 prediction 0.415922110822776 Functional Loss - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7390295 chr6:7390296 nonsynonymous SNV 0.991 0 22 hm5C_associated_SNPs_91620 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr6:7390256-7390298
64251 chr10 75532189 75532189 1 + G A UCEC 75532186 + 75532166 75532206 41 GTCCGTAGCGGAGAGGGAGGCCGGCGGGGAGGCGGAGTGGG GTCCGTAGCGGAGAGGGAGGCCGACGGGGAGGCGGAGTGGG < 41bp 0.707959766221539 0.452307472677691 0.86805415 0.81879425 prediction 0.415919532443078 Functional Loss - FUT11 ENSG00000196968;ENSG00000267964 CDS Human other chr10:75532186 chr10:75532189 nonsynonymous SNV 0.109 0 24 hm5C_associated_SNPs_91621 0 0 2 DDX3X POSTAR2 ENCODE chr10:75532101-75532243
64251 chr2 99170757 99170757 1 + C T COAD 99170754 + 99170734 99170774 41 ACACGGCAGCTGGTCACGGTCTGCGACTGCAAGCTCCTGGC ACACGGCAGCTGGTCACGGTCTGTGACTGCAAGCTCCTGGC < 41bp 0.750045461096888 0.542086359671062 0.17836899 0.19865486 prediction 0.415918202851653 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99170754 chr2:99170757 synonymous SNV . 0 24 hm5C_associated_SNPs_91622 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:99170743-99170763
64251 chr1 227842115 227842115 1 + G T SARC 227842112 + 227842092 227842132 41 ATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCC ATGCCAAAAAGTGACACTGACAATACATAGAAGCTGGGGCC < 41bp 0.707951443839848 0.350672470597566 0.18534353 0.015846282 prediction 0.415902887679696 Functional Loss - ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842112 chr1:227842115 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_91626 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:227842070-227842135
64251 chr11 77911746 77911746 1 + G A STAD 77911743 + 77911723 77911763 41 GCCTCTCTGGTCAAGGAGGACTCGAACTCGGGGACCAGCTG GCCTCTCTGGTCAAGGAGGACTCAAACTCGGGGACCAGCTG < 41bp 0.80012350999095 0.592172666311738 0.9235722 0.8515955 prediction 0.415901687358424 Functional Loss - USP35 ENSG00000118369 CDS Human protein_coding chr11:77911743 chr11:77911746 synonymous SNV . 0 24 hm5C_associated_SNPs_91627 0 0 1 PPIG POSTAR2 ENCODE chr11:77911714-77911795
64251 chr8 75272429 75272429 1 + A C UCEC 75272425 + 75272405 75272445 41 GCATGTATTACCCACGGGTACAACATTACCGAGAGCTGCTT GCATGTATTACCCACGGGTACAACCTTACCGAGAGCTGCTT < 41bp 0.707949413815037 0.282776848352574 0.12696368 0.043913066 prediction 0.415898827630074 Functional Loss - GDAP1 ENSG00000104381 CDS Human protein_coding chr8:75272425 chr8:75272429 nonsynonymous SNV 0.978 4 25 hm5C_associated_SNPs_91628 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:75272409-75272435
64251 chr3 183888427 183888427 1 + C T SKCM 183888425 + 183888405 183888445 41 GCCGCCCGCGGCCATGGGGCCCCCAGGAGCCCCTCCGGGCC GCCGCCCGCGGCCATGGGGCCCTCAGGAGCCCCTCCGGGCC < 41bp 0.707948735583204 0.436274465655652 0.32706666 0.2804196 prediction 0.415897471166407 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183888425 chr3:183888427 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_91629 0 0 1 METAP2 POSTAR2 ENCODE chr3:183888375-183888431
64251 chr6 31795761 31795761 1 + G A UCEC 31795758 + 31795738 31795778 41 CCGCGGCGATCGGCATCGACCTGGGCACCACCTACTCCTGC CCGCGGCGATCGGCATCGACCTGAGCACCACCTACTCCTGC < 41bp 0.802482990452222 0.594534392650643 0.5582146 0.38137943 prediction 0.415897195603159 Functional Loss - HSPA1B ENSG00000204388 CDS Human protein_coding chr6:31795758 chr6:31795761 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_91630 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:31795720-31795776
64251 chr19 1038289 1038289 1 + A C rs3087680 1038285 + 1038265 1038305 41 GTTTCTATGCCCGCAAGTTTCAGGAAGTATTCACAAAAGAA GTTTCTATGCCCGCAAGTTTCAGGCAGTATTCACAAAAGAA < 41bp 0.707937215725643 0.368546601272154 0.85810816 0.5920085 prediction 0.415874431451285 Functional Loss - CNN2 ENSG00000064666 UTR3 Human protein_coding chr19:1038285 chr19:1038289 . . 0 25 hm5C_associated_SNPs_91631 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:1038268-1038306
64251 chr2 102476285 102476285 1 + G A CESC 102476282 + 102476262 102476302 41 GCAAGCCAAGCTTCCATGCTCCCGAGCCCAAAGCCCACTAC GCAAGCCAAGCTTCCATGCTCCCAAGCCCAAAGCCCACTAC < 41bp 0.707936416636569 0.47641187081786 0.31291616 0.36790025 prediction 0.415872833273138 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102476282 chr2:102476285 nonsynonymous SNV 0.595 2 24 hm5C_associated_SNPs_91632 0 0 7 FXR2 POSTAR2 ENCODE chr2:102476205-102476316
64251 chr11 107992362 107992362 1 + G T SARC 107992360 + 107992340 107992380 41 GTGCTGGCGGCACTTCTGCGCAGCGGCGCCCGCAGCCGCAG GTGCTGGCGGCACTTCTGCGCATCGGCGCCCGCAGCCGCAG < 41bp 0.917348396697084 0.709417170647603 0.3618995 0.11737007 prediction 0.415862452098962 Functional Loss - ACAT1 ENSG00000075239 CDS Human protein_coding chr11:107992360 chr11:107992362 nonsynonymous SNV 0.012 1 23 hm5C_associated_SNPs_91637 0 0 9 DDX3X POSTAR2 ENCODE chr11:107992294-107992406
64251 chr10 51579259 51579259 1 + C T LUAD 51579256 + 51579236 51579276 41 GTGGAGTTCTCCGGGCTGAACAGCAAATTAAAGATAACTTG GTGGAGTTCTCCGGGCTGAACAGTAAATTAAAGATAACTTG < 41bp 0.747931194485541 0.540000400468939 0.6263156 0.6222385 prediction 0.415861588033205 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51579256 chr10:51579259 stopgain . 0 24 hm5C_associated_SNPs_91638 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:51579210-51579260
64251 chr9 134072738 134072738 1 + G A BLCA 134072735 + 134072715 134072755 41 ATCCGCATCAAACACCACCCCAGGAGAACCTGCCGCATCTA ATCCGCATCAAACACCACCCCAGAAGAACCTGCCGCATCTA < 41bp 0.795076064225893 0.587150681836376 0.9218664 0.7770241 prediction 0.415850764779034 Functional Loss - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134072735 chr9:134072738 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_91643 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:134072719-134072740
64251 chr1 32627617 32627617 1 + A T LUAD 32627615 + 32627595 32627635 41 GGGCCCTGTCAAATCTCTGCCGAGGGAAAAACCCACCCCCA GGGCCCTGTCAAATCTCTGCCGTGGGAAAAACCCACCCCCA < 41bp 0.735917125871498 0.527994946034368 0.90224445 0.669362 prediction 0.415844359674261 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32627615 chr1:32627617 synonymous SNV . 0 23 hm5C_associated_SNPs_91646 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32627578-32627620
64251 chr1 227920624 227920624 1 - G A STAD 227920627 - 227920607 227920647 41 TGCGCCGTGCAGGAGGAGGTCAGCGAGTGGAGGGACTCCAT TGCGCCGTGCAGGAGGAGGTCAGTGAGTGGAGGGACTCCAT < 41bp 0.716284253904498 0.508362839313959 0.85723394 0.8281585 prediction 0.41584282918108 Functional Loss - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227920627 chr1:227920624 synonymous SNV . 0 24 hm5C_associated_SNPs_91647 0 0 3 PPIG POSTAR2 ENCODE chr1:227920598-227920667
64251 chr15 65917115 65917115 1 + G A COAD 65917112 + 65917092 65917132 41 TTACAGCAACCTATAAAATACTCGAAACCAACTCTCTTAAG TTACAGCAACCTATAAAATACTCAAAACCAACTCTCTTAAG < 41bp 0.707919598054536 0.475318193956724 0.39311808 0.07509765 prediction 0.415839196109072 Functional Loss - SLC24A1 ENSG00000074621 CDS Human protein_coding chr15:65917112 chr15:65917115 nonsynonymous SNV 0.007 1 24 hm5C_associated_SNPs_91649 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr15:65917097-65917115
64251 chr22 23503088 23503088 1 + C T UCEC 23503085 + 23503065 23503105 41 GGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCT GGCGAGAACGTGAAGGCATTCTTTAGCCGCGTAGCCGCCCT < 41bp 0.772604584130846 0.564686492734552 0.444288 0.08595243 prediction 0.415836182792588 Functional Loss - RAB36 ENSG00000100228 CDS Human protein_coding chr22:23503085 chr22:23503088 synonymous SNV . 0 24 hm5C_associated_SNPs_91651 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:23503070-23503093
64251 chr1 11808667 11808667 1 + G T LUSC 11808665 + 11808645 11808685 41 GGGTGAGCTCCTGGTCCACACTGGTGAGGCCACCACCTCCA GGGTGAGCTCCTGGTCCACACTTGTGAGGCCACCACCTCCA < 41bp 0.911966066249663 0.704051419034942 0.3575946 0.15958539 prediction 0.415829294429441 Functional Loss - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808665 chr1:11808667 nonsynonymous SNV 0.032 3 23 hm5C_associated_SNPs_91654 0 0 4 PRPF8 POSTAR2 ENCODE chr1:11808663-11808708
64251 chr7 44802875 44802875 1 + G T BRCA 44802871 + 44802851 44802891 41 TCAGTAAAGCGGAACTTCAGCAGCGGCACCATCCCTGGCAC TCAGTAAAGCGGAACTTCAGCAGCTGCACCATCCCTGGCAC < 41bp 0.707912425064272 0.493973502283959 0.8841526 0.8980188 prediction 0.415824850128544 Functional Loss - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44802871 chr7:44802875 nonsynonymous SNV 0.964 2 25 hm5C_associated_SNPs_91656 0 0 2 GRWD1 POSTAR2 ENCODE chr7:44802862-44802911
64251 chr1 205501486 205501486 1 + C T rs191189380 205501484 + 205501464 205501504 41 GTGCCAGGCTGACCTCAGCTCCCGAAGGCTCGCACAGCCTC GTGCCAGGCTGACCTCAGCTCCTGAAGGCTCGCACAGCCTC < 41bp 0.713732795927429 0.505827999172082 0.283974 0.13072261 prediction 0.415809593510693 Functional Loss - CDK18 ENSG00000117266 UTR3 Human protein_coding chr1:205501484 chr1:205501486 . . 0 23 hm5C_associated_SNPs_91660 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:205501460-205501495
64251 chr3 14712508 14712508 1 + G T COAD 14712505 + 14712485 14712525 41 CTTTGTGGGTCAGAAGAGAACTGGTTTTTCCAGCAGCCAGG CTTTGTGGGTCAGAAGAGAACTGTTTTTTCCAGCAGCCAGG < 41bp 0.707901562305865 0.422703945333836 0.43750757 0.2958561 prediction 0.41580312461173 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712505 chr3:14712508 nonsynonymous SNV 0.586 0 24 hm5C_associated_SNPs_91663 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:14712500-14712520
64251 chr9 138395627 138395627 1 + G A COAD 138395624 + 138395604 138395644 41 GGGCGGCATGCTGACCAACGCGCGCCTCCTCTTTGGCCCCA GGGCGGCATGCTGACCAACGCGCACCTCCTCTTTGGCCCCA < 41bp 0.820268362492154 0.612367033269587 0.5982401 0.14544821 prediction 0.415802658445133 Functional Loss - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395624 chr9:138395627 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_91664 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395616-138395714
64251 chr12 120884352 120884352 1 + G A SARC 120884349 + 120884329 120884369 41 GGGCGCCAGGGCTTCACCTCCAAGGCGGATCCTCAGGTAAA GGGCGCCAGGGCTTCACCTCCAAAGCGGATCCTCAGGTAAA < 41bp 0.811630609129409 0.603734714529366 0.9060484 0.79340804 prediction 0.415791789200087 Functional Loss - GATC ENSG00000257218 CDS Human protein_coding chr12:120884349 chr12:120884352 synonymous SNV . 0 24 hm5C_associated_SNPs_91666 0 0 7 DDX3X POSTAR2 ENCODE chr12:120884281-120884365
64251 chr11 379671 379671 1 + C T SKCM 379668 + 379648 379688 41 GGCCACTGCGCCTGGCCTGGCGCCAGGACGTGATGGTTCAC GGCCACTGCGCCTGGCCTGGCGCTAGGACGTGATGGTTCAC < 41bp 0.724227170472441 0.516332161978929 0.40007383 0.35342705 prediction 0.415790016987026 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:379668 chr11:379671 stopgain 1.000 0 24 hm5C_associated_SNPs_91668 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:379669-379684
64251 chr11 117152658 117152658 1 + C T UCS 117152656 + 117152636 117152676 41 ACCCAGTCCCTCTCTGGCTCCTCGGATGCCCTTCTCCATTG ACCCAGTCCCTCTCTGGCTCCTTGGATGCCCTTCTCCATTG < 41bp 0.87855265497478 0.670659557023835 0.22047868 0.039390802 prediction 0.41578619590189 Functional Loss - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152656 chr11:117152658 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_91670 0 0 1 GRWD1 POSTAR2 ENCODE chr11:117152642-117152732
64251 chrX 115590115 115590115 1 + G T UCS 115590113 + 115590093 115590133 41 CTGTTAGTGGCAGCAGAAAACCGGAATGAGATCTCATTGAA CTGTTAGTGGCAGCAGAAAACCTGAATGAGATCTCATTGAA < 41bp 0.707888298876352 0.392646130810675 0.36976963 0.17046675 prediction 0.415776597752703 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115590113 chrX:115590115 synonymous SNV . 0 23 hm5C_associated_SNPs_91671 0 0 1 SND1 POSTAR2 ENCODE chrX:115590088-115590129
64251 chr5 172116671 172116671 1 + G A rs148463819 172116668 + 172116648 172116688 41 TGGCAGGGCTGGGATTCAAACCCGGGAGTGTCTGCTGCCAC TGGCAGGGCTGGGATTCAAACCCAGGAGTGTCTGCTGCCAC < 41bp 0.707887955370906 0.47401966230156 0.25796247 0.03318867 prediction 0.415775910741813 Functional Loss - NEURL1B ENSG00000214357 UTR3 Human protein_coding chr5:172116668 chr5:172116671 . . 0 24 hm5C_associated_SNPs_91672 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:172116664-172116686
64251 chrX 70612511 70612511 1 + G A UCEC 70612508 + 70612488 70612528 41 GTGACTGGGGTGGCAGATCCCACGGGGTGTGGTGAAGGATT GTGACTGGGGTGGCAGATCCCACAGGGTGTGGTGAAGGATT < 41bp 0.78549264851426 0.577605315115175 0.8856816 0.81115615 prediction 0.415774666798169 Functional Loss - TAF1 ENSG00000147133 CDS Human protein_coding chrX:70612508 chrX:70612511 synonymous SNV . 0 24 hm5C_associated_SNPs_91673 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70612509-70612534
64251 chrX 56590349 56590349 1 + C T UCEC 56590347 + 56590327 56590367 41 CAGCGGCCCCCCGCGCCCCTCCCGCGGCCCTGCTGCGGCCC CAGCGGCCCCCCGCGCCCCTCCTGCGGCCCTGCTGCGGCCC < 41bp 0.707886336908371 0.477109402085483 0.43362808 0.14413738 prediction 0.415772673816743 Functional Loss - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590347 chrX:56590349 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_91674 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chrX:56590341-56590382
64251 chr8 20067030 20067030 1 + G T LUAD 20067027 + 20067007 20067047 41 GTTCTGGAAGTTAGTGGTTCCAAGGCAGTAGTTCAGGTAAG GTTCTGGAAGTTAGTGGTTCCAATGCAGTAGTTCAGGTAAG < 41bp 0.70787921229617 0.30859514527639 0.66781586 0.32582602 prediction 0.41575842459234 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20067027 chr8:20067030 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_91682 0 0 7 DDX24 POSTAR2 ENCODE chr8:20066996-20067043
64251 chrX 65423252 65423252 1 + G T LUAD 65423248 + 65423228 65423268 41 GGCAGGCAGCCATCGAGAAGCAGGGATGAGGGCAATCTATA GGCAGGCAGCCATCGAGAAGCAGGTATGAGGGCAATCTATA < 41bp 0.751208025960031 0.543331388355293 0.8438921 0.65883994 prediction 0.415753275209477 Functional Loss - HEPH ENSG00000089472 CDS Human protein_coding chrX:65423248 chrX:65423252 synonymous SNV . 0 25 hm5C_associated_SNPs_91683 0 0 2 SND1 POSTAR2 ENCODE chrX:65423211-65423264
64251 chr20 62521244 62521244 1 + C T CESC 62521242 + 62521222 62521262 41 GAGAGAACGGCAGTGACAACCTCCCTTCCTCAGCGGGGAGT GAGAGAACGGCAGTGACAACCTTCCTTCCTCAGCGGGGAGT < 41bp 0.707874259852293 0.435180943234352 0.2044299 0.030698389 prediction 0.415748519704587 Functional Loss - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62521242 chr20:62521244 synonymous SNV 0.046 0 23 hm5C_associated_SNPs_91685 0 0 1 TBRG4 POSTAR2 ENCODE chr20:62521205-62521257
64251 chr15 42041432 42041432 1 + C T UCEC 42041429 + 42041409 42041449 41 TCAAGCTGTTGGGTCTTCTTCAGCAGTGAATGTTATCACTC TCAAGCTGTTGGGTCTTCTTCAGTAGTGAATGTTATCACTC < 41bp 0.724176748058374 0.516303327601149 0.7171735 0.46870252 prediction 0.41574684091445 Functional Loss - MGA ENSG00000174197 CDS Human protein_coding chr15:42041429 chr15:42041432 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_91686 0 0 1 IGF2BP1 POSTAR2 ENCODE chr15:42041350-42041452
64251 chr4 88902824 88902824 1 + G A UCEC 88902821 + 88902801 88902841 41 GAACTGGTCACTGATTTTCCCACGGACCTGCCAGCAACCGA GAACTGGTCACTGATTTTCCCACAGACCTGCCAGCAACCGA < 41bp 0.798054426401661 0.590183209239408 0.3427827 0.08949345 prediction 0.415742434324508 Functional Loss - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88902821 chr4:88902824 synonymous SNV . 0 24 hm5C_associated_SNPs_91688 0 0 5 GRWD1 POSTAR2 ENCODE chr4:88902814-88902885
64251 chr1 33235498 33235498 1 + G A SKCM 33235495 + 33235475 33235515 41 TTCCAGGCCTGAGGAATGAGCGTGAGGCACCAGGCACGCCC TTCCAGGCCTGAGGAATGAGCGTAAGGCACCAGGCACGCCC < 41bp 0.816797368117802 0.608931064814507 0.75238186 0.3892901 prediction 0.41573260660659 Functional Loss - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33235495 chr1:33235498 nonsynonymous SNV 0.203 0 24 hm5C_associated_SNPs_91691 0 0 5 BUD13 POSTAR2 ENCODE chr1:33235448-33235513
64251 chrX 153678245 153678245 1 + C T UCEC 153678242 + 153678222 153678262 41 GGCTCCCAGCATCACAGCTTCTACGACTTCATCGTCACCAA GGCTCCCAGCATCACAGCTTCTATGACTTCATCGTCACCAA < 41bp 0.708714685742111 0.500849773738213 0.062737346 0.121378034 prediction 0.415729824007796 Functional Loss - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678242 chrX:153678245 synonymous SNV . 0 24 hm5C_associated_SNPs_91692 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678232-153678260
64251 chr20 5966664 5966664 1 + G T UCEC 5966662 + 5966642 5966682 41 TGTGTACCCAAGGCTATCCACAGAAGCTGCTCGAGTTCTTC TGTGTACCCAAGGCTATCCACATAAGCTGCTCGAGTTCTTC < 41bp 0.707862197133636 0.351041427271328 0.7959898 0.16097593 prediction 0.415724394267271 Functional Loss - MCM8 ENSG00000125885 CDS Human protein_coding chr20:5966662 chr20:5966664 stopgain 0.977 1 23 hm5C_associated_SNPs_91693 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:5966650-5966679
64251 chr2 230875459 230875459 1 + C T UCEC 230875456 + 230875436 230875476 41 GAACAGATAGTCCAGTCGACCTGCGACACCATCACTCCTGA GAACAGATAGTCCAGTCGACCTGTGACACCATCACTCCTGA < 41bp 0.716350593236734 0.508495750729384 0.21919572 0.17461658 prediction 0.415709685014701 Functional Loss - FBXO36 ENSG00000153832 CDS Human protein_coding chr2:230875456 chr2:230875459 synonymous SNV . 0 24 hm5C_associated_SNPs_91697 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr2:230875440-230875460
64251 chr3 179341806 179341806 1 + C T SKCM 179341803 + 179341783 179341823 41 CAAGGAACTTATTGATCATTCTCCGAAAGCAACTCCTGACA CAAGGAACTTATTGATCATTCTCTGAAAGCAACTCCTGACA < 41bp 0.707851187186547 0.493313410035744 0.17517474 0.15607491 prediction 0.415702374373093 Functional Loss - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179341803 chr3:179341806 nonsynonymous SNV 0.865 1 24 hm5C_associated_SNPs_91701 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:179341765-179341812
64251 chr4 89576376 89576376 1 + G A LUSC 89576373 + 89576353 89576393 41 GTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAG GTTCCTGTGGGCAACTTGGACACAACTCCATGAATGATGAG < 41bp 0.797000580816958 0.589149776730664 0.09269664 0.0721789 prediction 0.415701608172587 Functional Loss - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89576373 chr4:89576376 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_91702 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:89576363-89576380
64251 chr3 152553446 152553446 1 + G C rs555812164 152553442 + 152553422 152553462 41 GAGCCCCTGCGCGCCCCCTCCCGCGGGGATCCAGTTCGCCT GAGCCCCTGCGCGCCCCCTCCCGCCGGGATCCAGTTCGCCT < 41bp 0.777404861577899 0.569559373481281 0.5092214 0.263695 prediction 0.415690976193236 Functional Loss - P2RY1 ENSG00000169860 UTR5 Human protein_coding chr3:152553442 chr3:152553446 . . 0 25 hm5C_associated_SNPs_91709 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:152553442-152553480
64251 chr22 45121160 45121160 1 + G A LUAD 45121157 + 45121137 45121177 41 ACAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGGTAGG ACAGAGCTGGGGTCCTTCTTCACAGAGTACCTGCAGGTAGG < 41bp 0.827490515360933 0.61964991457646 0.82530516 0.39166215 prediction 0.415681201568946 Functional Loss - PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45121157 chr22:45121160 synonymous SNV . 0 24 hm5C_associated_SNPs_91712 0 0 3 PPIG POSTAR2 ENCODE chr22:45121118-45121179
64251 chr19 3531983 3531983 1 + A C GBM 3531979 + 3531959 3531999 41 ATGATCCTGCAGAGGGACATCCGCACCCCGCCACTGCAGTC ATGATCCTGCAGAGGGACATCCGCCCCCCGCCACTGCAGTC < 41bp 0.707834193999848 0.295231469070784 0.16009903 0.24327552 prediction 0.415668387999696 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3531979 chr19:3531983 nonsynonymous SNV 0.452 2 25 hm5C_associated_SNPs_91716 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:3531972-3532015
64251 chr12 58176623 58176623 1 + G A THYM 58176620 + 58176600 58176640 41 TCGCTGCGCGTGTTTCTGGTCGCGCGGACCGGGAGCTACCC TCGCTGCGCGTGTTTCTGGTCGCACGGACCGGGAGCTACCC < 41bp 0.707833608941474 0.46684987528592 0.89960194 0.8641781 prediction 0.415667217882948 Functional Loss - TSFM ENSG00000123297 CDS Human protein_coding chr12:58176620 chr12:58176623 synonymous SNV . 0 24 hm5C_associated_SNPs_91717 0 0 6 BUD13 POSTAR2 ENCODE chr12:58176615-58176697
64251 chr13 115090169 115090169 1 + A T HNSC 115090165 + 115090145 115090185 41 TGAGCCAAGGAAGCCATCCCCTTCAGAGTCTCCTGAACCTT TGAGCCAAGGAAGCCATCCCCTTCTGAGTCTCCTGAACCTT < 41bp 0.707827861267121 0.367267637053757 0.22101372 0.22298083 prediction 0.415655722534243 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090165 chr13:115090169 synonymous SNV . 0 25 hm5C_associated_SNPs_91722 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:115090160-115090180
64251 chr5 118860938 118860938 1 + T C rs11539471 118860937 + 118860917 118860957 41 TTGTACCGCCTCAGTGGAGACTGGAATCCCTTACACATTGA TTGTACCGCCTCAGTGGAGACCGGAATCCCTTACACATTGA < 41bp 0.835815061281317 0.627988980896977 0.24996719 0.4870756 prediction 0.41565216076868 Functional Loss - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118860937 chr5:118860938 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_91728 3 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr5:118860930-118860954
64251 chr5 137518570 137518570 1 + G A CESC 137518567 + 137518547 137518587 41 CAGGAGGAGCTGTCCACTTCCTTGAAGAGGAGTGTCTACAT CAGGAGGAGCTGTCCACTTCCTTAAAGAGGAGTGTCTACAT < 41bp 0.803447309298885 0.595622539854394 0.23969907 0.18955615 prediction 0.415649538888983 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518567 chr5:137518570 synonymous SNV . 0 24 hm5C_associated_SNPs_91729 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:137518547-137518570
64251 chr2 73899474 73899474 1 + C T UCEC 73899472 + 73899452 73899492 41 GAACGGTGCCGAAAAACACACTCGAGCCAACTCCAAGTTCC GAACGGTGCCGAAAAACACACTTGAGCCAACTCCAAGTTCC < 41bp 0.781568496185103 0.573745113887093 0.4523244 0.20985219 prediction 0.415646764596021 Functional Loss - ALMS1P1 ENSG00000163016 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:73899472 chr2:73899474 . . 0 23 hm5C_associated_SNPs_91730 0 0 1 HNRNPC POSTAR2 SRX1438577 chr2:73899460-73899480
64251 chr7 141464118 141464118 1 + T C rs117113617 141464117 + 141464097 141464137 41 ATCATCACCACCCTGGCACTCTTGAGGATCATTCTGCTGTG ATCATCACCACCCTGGCACTCCTGAGGATCATTCTGCTGTG < 41bp 0.745818790323455 0.537999235150826 0.10489488 0.1388182 prediction 0.415639110345256 Functional Loss - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464117 chr7:141464118 synonymous SNV . 0 22 hm5C_associated_SNPs_91736 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:141464078-141464136
64251 chr9 116930092 116930092 1 + C T UCEC 116930090 + 116930070 116930110 41 CGGGCCCGGCTCCAGGCTCCCACGGGCACCGTCATTCCTGC CGGGCCCGGCTCCAGGCTCCCATGGGCACCGTCATTCCTGC < 41bp 0.809392716447661 0.601576799892021 0.64491296 0.45863223 prediction 0.415631833111279 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116930090 chr9:116930092 nonsynonymous SNV 0.211 1 23 hm5C_associated_SNPs_91737 0 0 5 BUD13 POSTAR2 ENCODE chr9:116930066-116930096
64251 chr9 124080957 124080957 1 + T C LIHC 124080956 + 124080936 124080976 41 TCCCCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCAC TCCCCAGGTCTCGGTCCTTCCCGAGGGCGGTGAGACCCCAC < 41bp 0.811374522548458 0.603564650659999 0.5598669 0.9048705 prediction 0.415619743776919 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124080956 chr9:124080957 synonymous SNV . 0 22 hm5C_associated_SNPs_91743 0 0 7 BUD13 POSTAR2 ENCODE chr9:124080926-124080967
64251 chr3 17052041 17052041 1 + C T SKCM 17052038 + 17052018 17052058 41 GGTCAGGAAAAGGGCTGGCTCTCCATAGACGGGTTCACTAA GGTCAGGAAAAGGGCTGGCTCTCTATAGACGGGTTCACTAA < 41bp 0.798551882102352 0.590743523471916 0.96305114 0.93390155 prediction 0.415616717260872 Functional Loss - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17052038 chr3:17052041 synonymous SNV . 0 24 hm5C_associated_SNPs_91746 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:17052003-17052045
64251 chr19 47259842 47259842 1 + C T STAD 47259839 + 47259819 47259859 41 ACGTGGGCAACTGCGAGCAGCTGCGGGGGGCAGAGGCCGGC ACGTGGGCAACTGCGAGCAGCTGTGGGGGGCAGAGGCCGGC < 41bp 0.743319568214292 0.535514331805761 0.9007302 0.8982091 prediction 0.41561047281706 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259839 chr19:47259842 nonsynonymous SNV 0.991 5 24 hm5C_associated_SNPs_91748 0 0 1 DDX3X POSTAR2 ENCODE chr19:47259806-47259856
64251 chr6 41754709 41754709 1 + G A UCEC 41754706 + 41754686 41754726 41 AATGCCGCCTGGAGACTATTCGTGATCCCAAGGACACCCCT AATGCCGCCTGGAGACTATTCGTAATCCCAAGGACACCCCT < 41bp 0.800026632149617 0.592226919468492 0.19521675 0.25839844 prediction 0.41559942536225 Functional Loss - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41754706 chr6:41754709 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_91752 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:41754699-41754755
64251 chr11 61491044 61491044 1 + G T UCEC 61491040 + 61491020 61491060 41 GTAACCTGCGGACCTACAACCTGCGGTCAGTCAGCGGGCTG GTAACCTGCGGACCTACAACCTGCTGTCAGTCAGCGGGCTG < 41bp 0.712081009438207 0.504282797973868 0.5733684 0.36116242 prediction 0.415596422928677 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61491040 chr11:61491044 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_91753 0 0 1 PRPF8 POSTAR2 ENCODE chr11:61491034-61491083
64251 chr11 57463497 57463497 1 + G A UCEC 57463494 + 57463474 57463514 41 ACACAGGGTTGCGAACACACCTCGGCTTGGCTACTAATGAG ACACAGGGTTGCGAACACACCTCAGCTTGGCTACTAATGAG < 41bp 0.809902490630522 0.602106931423241 0.67290705 0.18355483 prediction 0.415591118414563 Functional Loss - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57463494 chr11:57463497 nonsynonymous SNV 0.335 0 24 hm5C_associated_SNPs_91755 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr11:57463486-57463512
64251 chrX 106882636 106882636 1 + G A SKCM 106882633 + 106882613 106882653 41 TTGATCATGATTAATGCCTGCAAGATTGCTTCAGCCAGCCG TTGATCATGATTAATGCCTGCAAAATTGCTTCAGCCAGCCG < 41bp 0.707790575626719 0.470729450596303 0.14310381 0.10083181 prediction 0.415581151253437 Functional Loss - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106882633 chrX:106882636 synonymous SNV . 0 24 hm5C_associated_SNPs_91757 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:106882524-106882662
64251 chr11 75479890 75479890 1 + G C rs531998947 75479886 + 75479866 75479906 41 CGCCACCACTGGCCGCCGGCCGCAGCTCCAGGTGTCCTAGC CGCCACCACTGGCCGCCGGCCGCACCTCCAGGTGTCCTAGC < 41bp 0.707789870267303 0.430866279511495 0.83761036 0.2717446 prediction 0.415579740534607 Functional Loss - DGAT2 ENSG00000062282 UTR5 Human protein_coding chr11:75479886 chr11:75479890 . . 0 25 hm5C_associated_SNPs_91758 0 0 4 DDX3X POSTAR2 ENCODE chr11:75479856-75479935
64251 chr11 65827296 65827296 1 + C T ESCA 65827293 + 65827273 65827313 41 CGTGGAGATGCACGATGTGACAGCGCAGGACCCTAAGCTCT CGTGGAGATGCACGATGTGACAGTGCAGGACCCTAAGCTCT < 41bp 0.707782785470346 0.491903435154464 0.29797292 0.22932342 prediction 0.415565570940692 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65827293 chr11:65827296 nonsynonymous SNV 0.902 3 24 hm5C_associated_SNPs_91761 0 0 27 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65827252-65827297
64251 chr1 16258648 16258648 1 + T C KIRP 16258647 + 16258627 16258667 41 GGAGAACGAGGCCAAGGAACCTGCAGAAACACTCAAGCCAC GGAGAACGAGGCCAAGGAACCCGCAGAAACACTCAAGCCAC < 41bp 0.786653604743011 0.578872615108214 0.73698044 0.57256687 prediction 0.415561979269594 Functional Loss - SPEN ENSG00000065526 CDS Human protein_coding chr1:16258647 chr1:16258648 synonymous SNV . 0 22 hm5C_associated_SNPs_91763 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:16258598-16258650
64251 chr14 101200729 101200729 1 + G A GBM 101200726 + 101200706 101200746 41 GTGACCAACTGCGCCAGCAGCCCGTGCCAGAACGGGGGCAC GTGACCAACTGCGCCAGCAGCCCATGCCAGAACGGGGGCAC < 41bp 0.707780051838696 0.455053750566847 0.5861812 0.40061966 prediction 0.415560103677391 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200726 chr14:101200729 synonymous SNV . 0 24 hm5C_associated_SNPs_91765 0 0 9 DDX3X POSTAR2 ENCODE chr14:101200650-101200752
64251 chr14 101200728 101200728 1 + C T SKCM 101200726 + 101200706 101200746 41 GTGACCAACTGCGCCAGCAGCCCGTGCCAGAACGGGGGCAC GTGACCAACTGCGCCAGCAGCCTGTGCCAGAACGGGGGCAC < 41bp 0.707780051838696 0.449848099114716 0.5861812 0.5456585 prediction 0.415560103677391 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200726 chr14:101200728 nonsynonymous SNV 0.166 4 23 hm5C_associated_SNPs_91766 0 0 9 DDX3X POSTAR2 ENCODE chr14:101200650-101200752
64251 chr6 44320592 44320592 1 + G T SARC 44320589 + 44320569 44320609 41 CAGTGAGCCTCCTGGCCTCCCCAGAGTGTCTGCTTACGTAG CAGTGAGCCTCCTGGCCTCCCCATAGTGTCTGCTTACGTAG < 41bp 0.707779891925612 0.307811246046662 0.043073535 0.04359424 prediction 0.415559783851225 Functional Loss - SPATS1 ENSG00000249481 CDS Human protein_coding chr6:44320589 chr6:44320592 nonsynonymous SNV 0.005 1 24 hm5C_associated_SNPs_91767 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:44320565-44320603
64251 chr2 198570520 198570520 1 + T C UCEC 198570519 + 198570499 198570539 41 CTTTTCCAGGAGGCCGGTATCTCCTGCACAGATTTCATCCG CTTTTCCAGGAGGCCGGTATCCCCTGCACAGATTTCATCCG < 41bp 0.782581587023068 0.574805376791293 0.42126453 0.30145302 prediction 0.415552420463551 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570519 chr2:198570520 nonsynonymous SNV 0.987 2 22 hm5C_associated_SNPs_91769 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr2:198570500-198570520
64251 chr8 48647990 48647990 1 + G A BLCA 48647987 + 48647967 48648007 41 GGAAATCGAGCTTCTGAGTGCAGGAGGGGCCTCTGCAGAAC GGAAATCGAGCTTCTGAGTGCAGAAGGGGCCTCTGCAGAAC < 41bp 0.766029056066955 0.558256380996247 0.78704655 0.4465019 prediction 0.415545350141417 Functional Loss - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48647987 chr8:48647990 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_91770 0 0 1 UCHL5 POSTAR2 ENCODE chr8:48647931-48647999
64251 chr5 78533002 78533002 1 + G A READ 78532999 + 78532979 78533019 41 GGCCGGCGCCCAGAGAGGCCCAGGTGTCCTCTGTACGGATA GGCCGGCGCCCAGAGAGGCCCAGATGTCCTCTGTACGGATA < 41bp 0.81969742697038 0.611927965911667 0.8582364 0.41631007 prediction 0.415538922117425 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78532999 chr5:78533002 nonsynonymous SNV 0.563 0 24 hm5C_associated_SNPs_91775 0 0 1 FMR1 POSTAR2 ENCODE chr5:78532950-78533010
64251 chr11 8009011 8009011 1 + G C STAD 8009008 + 8008988 8009028 41 CGCCAGCACCGGCTGCGGCTCCGGTTCCCGCTGCGGCTCCA CGCCAGCACCGGCTGCGGCTCCGCTTCCCGCTGCGGCTCCA < 41bp 0.740061718590729 0.532293669596579 0.32406044 0.0684281 prediction 0.415536097988298 Functional Loss - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8009008 chr11:8009011 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_91777 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8008991-8009079
64251 chrX 77155051 77155051 1 + A T LGG 77155047 + 77155027 77155067 41 CGCAGTTCTAGCTTCACCTTCACGATGTTTCCCTTGGTCAA CGCAGTTCTAGCTTCACCTTCACGTTGTTTCCCTTGGTCAA < 41bp 0.707765305843135 0.486268386957701 0.14156517 0.16082802 prediction 0.415530611686269 Functional Loss - COX7B ENSG00000131174 CDS Human protein_coding chrX:77155047 chrX:77155051 nonsynonymous SNV 0.698 2 25 hm5C_associated_SNPs_91778 0 0 34 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:77154960-77155060
64251 chr1 41483462 41483462 1 + C T UCEC 41483460 + 41483440 41483480 41 TGGCTGCAGCGGATGCCCTGCACCAGGCCGCTGTCCTCTAC TGGCTGCAGCGGATGCCCTGCATCAGGCCGCTGTCCTCTAC < 41bp 0.820413304728048 0.61264844165871 0.151624 0.093322635 prediction 0.415529726138678 Functional Loss - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483460 chr1:41483462 nonsynonymous SNV 0.633 4 23 hm5C_associated_SNPs_91779 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:41483435-41483463
64251 chr11 44952350 44952350 1 + C T rs189133268 44952348 + 44952328 44952368 41 GTTTGATTAGTGATGTCTGCCACGGGCAGGGATGGAAGGAG GTTTGATTAGTGATGTCTGCCATGGGCAGGGATGGAAGGAG < 41bp 0.707763581314194 0.488069076671753 0.12965119 0.11138016 prediction 0.415527162628388 Functional Loss - TSPAN18 ENSG00000157570 UTR3 Human protein_coding chr11:44952348 chr11:44952350 . . 0 23 hm5C_associated_SNPs_91781 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:44952340-44952360
64251 chr11 640090 640090 1 + G C rs3889692 640089 + 640069 640109 41 TGCGGCCCCGACTGTGCGCCCGCCGCGCCCAGCCTCCCCCA TGCGGCCCCGACTGTGCGCCCCCCGCGCCCAGCCTCCCCCA < 41bp 0.879193213950345 0.671431175764311 0.29308522 0.25880274 prediction 0.415524076372067 Functional Loss - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640089 chr11:640090 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_91782 0 0 2 FAM120A POSTAR2 ENCODE chr11:640037-640097
64251 chr3 11389392 11389392 1 + G T STAD 11389389 + 11389369 11389409 41 ATCACATTTGTGGACAATGCCAAGATCTCCTACTCCAATCC ATCACATTTGTGGACAATGCCAATATCTCCTACTCCAATCC < 41bp 0.707758444862698 0.312042892605714 0.19132075 0.02572155 prediction 0.415516889725396 Functional Loss - ATG7 ENSG00000197548 CDS Human protein_coding chr3:11389389 chr3:11389392 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_91785 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:11389365-11389392
64251 chr1 11346011 11346011 1 + C T SARC 11346008 + 11345988 11346028 41 AGCATCCTGGCCACACACTGCACCATCAGCCTGGCACTCCC AGCATCCTGGCCACACACTGCACTATCAGCCTGGCACTCCC < 41bp 0.756112533450884 0.548354893877908 0.055392325 0.0132035315 prediction 0.415515279145951 Functional Loss - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11346008 chr1:11346011 synonymous SNV . 0 24 hm5C_associated_SNPs_91786 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:11346003-11346018
64251 chr20 33122512 33122512 1 + C T LUAD 33122510 + 33122490 33122530 41 GCACAGCTTCATCCTGAAGGCACGGAGCACCGTGCGTGACA GCACAGCTTCATCCTGAAGGCATGGAGCACCGTGCGTGACA < 41bp 0.816010723795012 0.608254553257342 0.16726997 0.11646408 prediction 0.415512341075339 Functional Loss - DYNLRB1 ENSG00000125971 CDS Human protein_coding chr20:33122510 chr20:33122512 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_91787 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:33122476-33122514
64251 chr2 176983854 176983854 1 + C T BLCA 176983851 + 176983831 176983871 41 ATCAGTAAGAGCGTTAACCTCACCGACAGGCAGGTCAAGAT ATCAGTAAGAGCGTTAACCTCACTGACAGGCAGGTCAAGAT < 41bp 0.777800631313899 0.570044972282094 0.1952627 0.28787524 prediction 0.415511318063611 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176983851 chr2:176983854 synonymous SNV . 0 24 hm5C_associated_SNPs_91788 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176983765-176983857
64251 chr1 55509702 55509702 1 + G A UCEC 55509699 + 55509679 55509719 41 TGAAGATGAGTGGCGACCTGCTGGAGCTGGTGAGCCACCCT TGAAGATGAGTGGCGACCTGCTGAAGCTGGTGAGCCACCCT < 41bp 0.70774331450768 0.46146645433012 0.76995385 0.71860206 prediction 0.41548662901536 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55509699 chr1:55509702 nonsynonymous SNV 0.733 0 24 hm5C_associated_SNPs_91796 0 0 7 RPS3 POSTAR2 ENCODE chr1:55509680-55509708
64251 chr11 61507072 61507072 1 + C T BLCA 61507070 + 61507050 61507090 41 TATAGCCCTCTCAGCCAGCACTCCACTCTACCCGCCCGGCC TATAGCCCTCTCAGCCAGCACTTCACTCTACCCGCCCGGCC < 41bp 0.707739358783695 0.413382740143646 0.94360334 0.15803328 prediction 0.41547871756739 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61507070 chr11:61507072 nonsynonymous SNV 0.431 4 23 hm5C_associated_SNPs_91799 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr11:61507067-61507102
64251 chr22 21802392 21802392 1 + G A rs146923472 21802389 + 21802369 21802409 41 TCGAGGGGACCCTGGCACCCCGGGCACACAAACCTCTGTGG TCGAGGGGACCCTGGCACCCCGGACACACAAACCTCTGTGG < 41bp 0.707733157165205 0.446644714227174 0.22807392 0.03934142 prediction 0.41546631433041 Functional Loss - HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21802389 chr22:21802392 . . 0 24 hm5C_associated_SNPs_91806 0 0 2 FAM120A POSTAR2 ENCODE chr22:21802364-21802394
64251 chr2 71298877 71298877 1 + G T CESC 71298873 + 71298853 71298893 41 GGAGGATCCTGATCGAGGAGCTGAGGGACCGATTTCCCTAC GGAGGATCCTGATCGAGGAGCTGATGGACCGATTTCCCTAC < 41bp 0.707732264753027 0.495889263580746 0.75141156 0.6330803 prediction 0.415464529506053 Functional Loss - NAGK ENSG00000124357 CDS Human protein_coding chr2:71298873 chr2:71298877 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_91809 0 0 2 PPIG POSTAR2 ENCODE chr2:71298813-71298932
64251 chr2 111921749 111921749 1 + C T UCEC 111921747 + 111921727 111921767 41 CCAAGCAGCCGAAGACCACCCACGAATGGTTATCTTACGAC CCAAGCAGCCGAAGACCACCCATGAATGGTTATCTTACGAC < 41bp 0.818861676833757 0.611134482979825 0.2600695 0.39760157 prediction 0.415454387707864 Functional Loss - BCL2L11 ENSG00000153094 CDS Human protein_coding chr2:111921747 chr2:111921749 stopgain 0.962 0 23 hm5C_associated_SNPs_91812 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:111921749-111921799
64251 chrX 149108899 149108899 1 + G A rs187028825 149108896 + 149108876 149108916 41 GGCAAGAGTCCAAACTTTCCCGCGGCGACCTAACTGCACCT GGCAAGAGTCCAAACTTTCCCGCAGCGACCTAACTGCACCT < 41bp 0.817685385931613 0.609966065642173 0.44731975 0.092430264 prediction 0.415438640578879 Functional Loss - LINC00894 ENSG00000235703 ncRNA_exonic Human antisense chrX:149108896 chrX:149108899 . . 0 24 hm5C_associated_SNPs_91819 0 0 9 CSTF2T POSTAR2 ENCODE chrX:149108829-149108941
64251 chrX 12809685 12809685 1 + G A LUSC 12809682 + 12809662 12809702 41 TCCCAGCGCGTGGCCGACCGCCTGGGCCTGGAGCTGGGCAA TCCCAGCGCGTGGCCGACCGCCTAGGCCTGGAGCTGGGCAA < 41bp 0.805742307295036 0.59802439044251 0.4659465 0.22363502 prediction 0.415435833705051 Functional Loss - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12809682 chrX:12809685 synonymous SNV . 0 24 hm5C_associated_SNPs_91820 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:12809677-12809712
64251 chr16 72134490 72134490 1 + C T LAML 72134487 + 72134467 72134507 41 CTGGATGGGCGCATTGTCTTCACCAAGCAGGTGAGGCTCCT CTGGATGGGCGCATTGTCTTCACTAAGCAGGTGAGGCTCCT < 41bp 0.707713619779547 0.48021678906192 0.19308567 0.30006403 prediction 0.415427239559094 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72134487 chr16:72134490 synonymous SNV . 0 24 hm5C_associated_SNPs_91823 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:72134470-72134492
64251 chr1 29630422 29630422 1 + G A rs532193157 29630419 + 29630399 29630439 41 AGCAGCCTCCTGGGGGGCTCCCCGAGGCGTCCCTGTGGCCG AGCAGCCTCCTGGGGGGCTCCCCAAGGCGTCCCTGTGGCCG < 41bp 0.810642919861242 0.602930932090406 0.7954494 0.64422363 prediction 0.415423975541672 Functional Loss - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29630419 chr1:29630422 synonymous SNV . 0 24 hm5C_associated_SNPs_91824 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29630415-29630451
64251 chr6 35260389 35260389 1 + G A BLCA 35260386 + 35260366 35260406 41 GGGAAACGCTTCACCGAGTACTCGAGCTTGTATAAGCACCA GGGAAACGCTTCACCGAGTACTCAAGCTTGTATAAGCACCA < 41bp 0.78809452923659 0.580383002083945 0.23484164 0.3247954 prediction 0.415423054305291 Functional Loss - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35260386 chr6:35260389 synonymous SNV . 0 24 hm5C_associated_SNPs_91826 0 0 2 GRWD1 POSTAR2 ENCODE chr6:35260360-35260396
64251 chr22 37962530 37962530 1 + C T SKCM 37962527 + 37962507 37962547 41 GTGGGCCGTGGCGGGGATGTCTTCGGGGACACGTCCTTCCT GTGGGCCGTGGCGGGGATGTCTTTGGGGACACGTCCTTCCT < 41bp 0.724184150737992 0.516474681213785 0.3299613 0.41770715 prediction 0.415418939048414 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962527 chr22:37962530 synonymous SNV . 0 24 hm5C_associated_SNPs_91827 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:37962507-37962535
64251 chr22 43558925 43558925 1 + C T UCEC 43558922 + 43558902 43558942 41 CCCTACCTGGCCTGGCTGGCCTTCACGACCACACTCAACTA CCCTACCTGGCCTGGCTGGCCTTTACGACCACACTCAACTA < 41bp 0.723511326564128 0.515801882965658 0.20641455 0.12459189 prediction 0.41541888719694 Functional Loss - TSPO ENSG00000100300 CDS Human protein_coding chr22:43558922 chr22:43558925 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_91828 0 0 1 GEMIN5 POSTAR2 ENCODE chr22:43558891-43558979
64251 chr17 18001619 18001619 1 + C T UCEC 18001616 + 18001596 18001636 41 AGTCTGATGACCTCCACGGCCAGCGAGGCAGCGTCCTATGA AGTCTGATGACCTCCACGGCCAGTGAGGCAGCGTCCTATGA < 41bp 0.707707807222178 0.489950723628537 0.273668 0.38103488 prediction 0.415415614444357 Functional Loss - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18001616 chr17:18001619 stopgain . 0 24 hm5C_associated_SNPs_91829 0 0 1 PRPF8 POSTAR2 ENCODE chr17:18001604-18001648
64251 chr19 54080490 54080490 1 + C T UCEC 54080487 + 54080467 54080507 41 AAGACTGTGGAAAGGCCTTTCGGCGTGGTGATGAGCTCACT AAGACTGTGGAAAGGCCTTTCGGTGTGGTGATGAGCTCACT < 41bp 0.74002626453463 0.532319656605792 0.34165424 0.26482087 prediction 0.415413215857676 Functional Loss - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080487 chr19:54080490 nonsynonymous SNV 0.252 1 24 hm5C_associated_SNPs_91830 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:54080478-54080504
64251 chr1 55527225 55527225 1 + A T OV 55527221 + 55527201 55527241 41 AGCATGGAATCCCGGCCCCTCAGGAGCAGGTGAAGAGGCCC AGCATGGAATCCCGGCCCCTCAGGTGCAGGTGAAGAGGCCC < 41bp 0.887793959371262 0.680092419182056 0.9009354 0.8876148 prediction 0.415403080378412 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55527221 chr1:55527225 nonsynonymous SNV 0.037 0 25 hm5C_associated_SNPs_91833 0 0 1 NOL12 POSTAR2 ENCODE chr1:55527202-55527229
64251 chr1 182835662 182835662 1 + C T rs142698184 182835659 + 182835639 182835679 41 CCTGGAAAAAGCTGTGGCTACAGCGTTCGATTTGAGTCTAT CCTGGAAAAAGCTGTGGCTACAGTGTTCGATTTGAGTCTAT < 41bp 0.728588186532128 0.520887956585943 0.18424931 0.16255441 prediction 0.415400459892369 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182835659 chr1:182835662 synonymous SNV . 0 24 hm5C_associated_SNPs_91836 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chr1:182835622-182835677
64251 chr15 29346239 29346239 1 + T C LUSC 29346238 + 29346218 29346258 41 AGGGCCTGGAGCTGGCTGCCCTGCGGCCAGAGAGCCCCGCG AGGGCCTGGAGCTGGCTGCCCCGCGGCCAGAGAGCCCCGCG < 41bp 0.796478117938283 0.588784691490408 0.8222991 0.81499237 prediction 0.41538685289575 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346238 chr15:29346239 nonsynonymous SNV 0.008 1 22 hm5C_associated_SNPs_91842 0 0 5 DDX3X POSTAR2 ENCODE chr15:29346183-29346250
64251 chr14 45431832 45431832 1 + G T SARC 45431828 + 45431808 45431848 41 ACTACAACTTCGCCTCTGGCCTCGGCCCTCTTGATGCCCTC ACTACAACTTCGCCTCTGGCCTCGTCCCTCTTGATGCCCTC < 41bp 0.734148691501057 0.526457239142655 0.22294262 0.20580727 prediction 0.415382904716804 Functional Loss - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45431828 chr14:45431832 nonsynonymous SNV 0.926 1 25 hm5C_associated_SNPs_91846 0 0 1 EIF3H POSTAR2 ENCODE chr14:45431819-45431867
64251 chr17 21204240 21204240 1 + G A SKCM 21204237 + 21204217 21204257 41 AGAAGCGGCTGCTCATGGACCTGGACATCAACATGCGCACG AGAAGCGGCTGCTCATGGACCTGAACATCAACATGCGCACG < 41bp 0.825163162134393 0.617473843547081 0.0774003 0.056545854 prediction 0.415378637174625 Functional Loss - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21204237 chr17:21204240 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91850 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:21204227-21204250
64251 chr12 83251095 83251095 1 + G A UCEC 83251092 + 83251072 83251112 41 TTTGCTTCTCACCCCATTCACACGGAGGCAGTGGCAGGAAT TTTGCTTCTCACCCCATTCACACAGAGGCAGTGGCAGGAAT < 41bp 0.707685908154759 0.464992961566246 0.88949686 0.36087364 prediction 0.415371816309517 Functional Loss - TMTC2 ENSG00000179104 CDS Human protein_coding chr12:83251092 chr12:83251095 synonymous SNV . 0 24 hm5C_associated_SNPs_91851 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:83251078-83251095
64251 chrX 69256906 69256906 1 + G A rs149508692 69256903 + 69256883 69256923 41 ACAGATCATATGGTAGGACCCTCGAGAGCCTTACTTCAAAG ACAGATCATATGGTAGGACCCTCAAGAGCCTTACTTCAAAG < 41bp 0.783998984481492 0.576313353642096 0.80415 0.39447752 prediction 0.415371261678792 Functional Loss - EDA ENSG00000158813 UTR3 Human protein_coding chrX:69256903 chrX:69256906 . . 0 24 hm5C_associated_SNPs_91852 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:69256886-69256906
64251 chr9 131002051 131002051 1 + G A COAD 131002048 + 131002028 131002068 41 GATGAACAAGAAGAAGACTTCAGGGAACCAGGTGAGTGGGG GATGAACAAGAAGAAGACTTCAGAGAACCAGGTGAGTGGGG < 41bp 0.799050589443421 0.591366172397034 0.92604935 0.9163154 prediction 0.415368834092775 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131002048 chr9:131002051 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_91854 0 0 6 DDX24 POSTAR2 ENCODE chr9:131002004-131002051
64251 chr17 36912143 36912143 1 + C T STAD 36912140 + 36912120 36912160 41 TTTTCTCCTACCTCAGTGCCCAGCGCCTCAAGTTCCGGCTG TTTTCTCCTACCTCAGTGCCCAGTGCCTCAAGTTCCGGCTG < 41bp 0.727000556006552 0.519316757858344 0.47336993 0.45886064 prediction 0.415367596296416 Functional Loss - PSMB3 ENSG00000108294 CDS Human other chr17:36912140 chr17:36912143 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_91855 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:36912135-36912173
64251 chr8 74237304 74237304 1 + G A rs143212904 74237301 + 74237281 74237321 41 CAGATATACTCAGAGATTATCCAGGTCTGCCTCCCAGCGAG CAGATATACTCAGAGATTATCCAAGTCTGCCTCCCAGCGAG < 41bp 0.726898432285882 0.519216974127782 0.9226891 0.82586205 prediction 0.415362916316199 Functional Loss - RDH10-AS1 ENSG00000250295 ncRNA_intronic Human antisense chr8:74237301 chr8:74237304 . . 0 24 hm5C_associated_SNPs_91858 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:74237302-74237328
64251 chr3 128979519 128979519 1 + G A BLCA 128979516 + 128979496 128979536 41 GTAATCTGGATCTGGAGAACCTGGTCACAGATTCAAACCGC GTAATCTGGATCTGGAGAACCTGATCACAGATTCAAACCGC < 41bp 0.70767874861915 0.465741679409558 0.070565194 0.08007875 prediction 0.415357497238301 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128979516 chr3:128979519 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_91861 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:128979498-128979528
64251 chr11 108175517 108175517 1 + C T LUSC 108175515 + 108175495 108175535 41 ACACATGTTCAGGGATTTTTCACCAGCTGTCTTCGACACTT ACACATGTTCAGGGATTTTTCATCAGCTGTCTTCGACACTT < 41bp 0.707677792372529 0.442606570202981 0.17390949 0.1191065 prediction 0.415355584745059 Functional Loss - ATM ENSG00000149311 CDS Human protein_coding chr11:108175515 chr11:108175517 nonsynonymous SNV 0.868 2 23 hm5C_associated_SNPs_91862 3 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:108175500-108175520
64251 chr1 171755182 171755182 1 + G A rs2232819 171755179 + 171755159 171755199 41 GCTGAGCTGTCGGCTAGAGTCATGGAGCTGGCCCCAGCTGG GCTGAGCTGTCGGCTAGAGTCATAGAGCTGGCCCCAGCTGG < 41bp 0.824824017805296 0.61714656939893 0.56606084 0.39431614 prediction 0.415354896812733 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755179 chr1:171755182 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_91863 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:171755147-171755195
64251 chr4 83996502 83996502 1 + A T LUAD 83996500 + 83996480 83996520 41 AGATCCAATCACTTTGTTTCCAAGTGAATAACCTTTTGGAG AGATCCAATCACTTTGTTTCCATGTGAATAACCTTTTGGAG < 41bp 0.718311956710441 0.510639040700359 0.8967538 0.64649117 prediction 0.415345832020163 Functional Loss - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83996500 chr4:83996502 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_91866 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:83996471-83996503
64251 chr19 11144852 11144852 1 + C T rs148495641 11144850 + 11144830 11144870 41 TCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTG TCAACCAGATGATCGCCCGGCATGAGGAGGAGTTTGATCTG < 41bp 0.707670718533531 0.435428599717437 0.35315323 0.41465437 prediction 0.415341437067063 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144850 chr19:11144852 synonymous SNV . 0 23 hm5C_associated_SNPs_91868 1 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11144829-11144856
64251 chr19 11144853 11144853 1 + G A GBM 11144850 + 11144830 11144870 41 TCAACCAGATGATCGCCCGGCACGAGGAGGAGTTTGATCTG TCAACCAGATGATCGCCCGGCACAAGGAGGAGTTTGATCTG < 41bp 0.707670718533531 0.475186469947442 0.35315323 0.46182817 prediction 0.415341437067063 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144850 chr19:11144853 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_91869 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:11144829-11144856
64251 chr4 6996016 6996016 1 + G A GBM 6996013 + 6995993 6996033 41 TTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCGTGA TTTCCACCACCGCACTCATCCTCAAGGACAGACCAGCGTGA < 41bp 0.80024568281374 0.59257686386246 0.17521092 0.05123064 prediction 0.41533763790256 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6996013 chr4:6996016 nonsynonymous SNV 0.966 2 24 hm5C_associated_SNPs_91873 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:6996010-6996023
64251 chr7 107217859 107217859 1 + G A CESC 107217856 + 107217836 107217876 41 GGGACTGGGTTGACATTGCTCTTGAACTCGGGACTCCTTAC GGGACTGGGTTGACATTGCTCTTAAACTCGGGACTCCTTAC < 41bp 0.734509015951853 0.526846601662622 0.059040934 0.12250617 prediction 0.415324828578462 Functional Loss - DUS4L ENSG00000105865 CDS Human protein_coding chr7:107217856 chr7:107217859 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_91879 0 0 2 CSTF2 POSTAR2 GSE37401,GSM917676 chr7:107217846-107217861
64251 chr16 88871992 88871992 1 + C T COAD 88871989 + 88871969 88872009 41 GTGGGCATGCTCCACAACCGCTCCGAGACGCCCACCTTTGC GTGGGCATGCTCCACAACCGCTCTGAGACGCCCACCTTTGC < 41bp 0.739905714254379 0.532245482488981 0.11742103 0.19882303 prediction 0.415320463530796 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88871989 chr16:88871992 synonymous SNV . 0 24 hm5C_associated_SNPs_91881 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:88871972-88871993
64251 chr11 61563832 61563832 1 + A T LUAD 61563830 + 61563810 61563850 41 AGAGGCTGAGTAAGAGCCGCCAAGGCAGCACCCAGGGCCGC AGAGGCTGAGTAAGAGCCGCCATGGCAGCACCCAGGGCCGC < 41bp 0.721641102528302 0.513983093830657 0.4238213 0.27377766 prediction 0.415316017395291 Functional Loss - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563830 chr11:61563832 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_91882 0 0 2 AARS POSTAR2 ENCODE chr11:61563783-61563856
64251 chr15 43476690 43476690 1 + T C GBM 43476689 + 43476669 43476709 41 CTTTGCGGACCTGGTTGACACTGCTGACACCTGTTCTCATT CTTTGCGGACCTGGTTGACACCGCTGACACCTGTTCTCATT < 41bp 0.707654090195706 0.458146895013076 0.06216216 0.114595145 prediction 0.415308180391413 Functional Loss - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476689 chr15:43476690 nonsynonymous SNV 0.436 1 22 hm5C_associated_SNPs_91883 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:43476670-43476695
64251 chr16 1877593 1877593 1 + G T KIRP 1877591 + 1877571 1877611 41 AGAAGGGGCTGCCCTGGACTCTGGCGAAGAGCTTCACGGCG AGAAGGGGCTGCCCTGGACTCTTGCGAAGAGCTTCACGGCG < 41bp 0.918425787989301 0.710772617671979 0.3805137 0.1380682 prediction 0.415306340634644 Functional Loss - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877591 chr16:1877593 synonymous SNV . 0 23 hm5C_associated_SNPs_91886 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:1877570-1877596
64251 chr13 113960824 113960824 1 + C T LGG 113960821 + 113960801 113960841 41 CCTCATGCATTGTGCGTCAGCAGCAATGTTTATGGTGAAAA CCTCATGCATTGTGCGTCAGCAGTAATGTTTATGGTGAAAA < 41bp 0.752171932546269 0.544520969756429 0.15560299 0.13730201 prediction 0.415301925579681 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113960821 chr13:113960824 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_91888 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr13:113960820-113960860
64251 chr14 95030225 95030225 1 + G A SKCM 95030222 + 95030202 95030242 41 TCAACCTCCCCGGCCATGGGCTGGAAACACGCGTGGGCAGT TCAACCTCCCCGGCCATGGGCTGAAAACACGCGTGGGCAGT < 41bp 0.836378860060956 0.628730859808888 0.21134436 0.093791604 prediction 0.415296000504136 Functional Loss - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030222 chr14:95030225 nonsynonymous SNV 0.002 3 24 hm5C_associated_SNPs_91890 0 0 2 SND1 POSTAR2 ENCODE chr14:95030154-95030254
64251 chr16 57416881 57416881 1 + G C LUSC 57416880 + 57416860 57416900 41 AAAGATGGCAGGAGAGATGGCGGAGGGCCTTCGCTACATCC AAAGATGGCAGGAGAGATGGCCGAGGGCCTTCGCTACATCC < 41bp 0.707637784572433 0.380178633506545 0.91391826 0.9059938 prediction 0.415275569144865 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416880 chr16:57416881 synonymous SNV . 0 22 hm5C_associated_SNPs_91895 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416792-57416886
64251 chr1 53676541 53676541 1 + C T BRCA 53676539 + 53676519 53676559 41 CACTCAGACCCCTGCCGTCACTCCACAGAGCCAGCCAGCTA CACTCAGACCCCTGCCGTCACTTCACAGAGCCAGCCAGCTA < 41bp 0.707635797859141 0.409566699015576 0.9445987 0.020811081 prediction 0.415271595718281 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53676539 chr1:53676541 nonsynonymous SNV 0.714 5 23 hm5C_associated_SNPs_91898 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:53676520-53676553
64251 chr11 75277979 75277979 1 + G A HNSC 75277976 + 75277956 75277996 41 GTCACCAAGGACGTGGAGCGCACGGACGGCGCCCTGCTAGT GTCACCAAGGACGTGGAGCGCACAGACGGCGCCCTGCTAGT < 41bp 0.825822480991062 0.618194963582015 0.84732795 0.21420053 prediction 0.415255034818096 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277976 chr11:75277979 synonymous SNV . 0 24 hm5C_associated_SNPs_91904 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:75277942-75277980
64251 chr3 141011495 141011495 1 + C T SKCM 141011492 + 141011472 141011512 41 AGAGCTGCCAACCCCATAGACTCCATGCTCTGCCACTTCTG AGAGCTGCCAACCCCATAGACTCTATGCTCTGCCACTTCTG < 41bp 0.795717532357638 0.588091134514421 0.96533036 0.9416269 prediction 0.415252795686434 Functional Loss - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141011492 chr3:141011495 synonymous SNV . 0 24 hm5C_associated_SNPs_91906 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141011475-141011511
64251 chr2 172844210 172844210 1 + G A CESC 172844207 + 172844187 172844227 41 CTTCGACTACTGGTAACTGACATGAGTGATGCCGAACAATA CTTCGACTACTGGTAACTGACATAAGTGATGCCGAACAATA < 41bp 0.712935309499366 0.505315423462795 0.19698712 0.14135155 prediction 0.415239772073143 Functional Loss - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172844207 chr2:172844210 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_91912 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr2:172844173-172844226
64251 chr1 156704011 156704011 1 + G T UCEC 156704009 + 156703989 156704029 41 TGAGGTGGTGGCCCTGGCCTCAGTGGGCTGCTGCTACATGA TGAGGTGGTGGCCCTGGCCTCATTGGGCTGCTGCTACATGA < 41bp 0.707617708759353 0.345032939408088 0.4613507 0.38292158 prediction 0.415235417518706 Functional Loss - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156704009 chr1:156704011 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_91915 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:156704005-156704028
64251 chr2 121746839 121746839 1 + G T rs147580961 121746835 + 121746815 121746855 41 AGGATGGTGGCTGCGGACTCCAACGTGGGCCCCTCCGCCCC AGGATGGTGGCTGCGGACTCCAACTTGGGCCCCTCCGCCCC < 41bp 0.709769722407252 0.502152327759591 0.41446912 0.1707736 prediction 0.415234789295323 Functional Loss - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121746835 chr2:121746839 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_91916 2 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:121746839-121746874
64251 chr2 128184716 128184716 1 + C T CESC 128184713 + 128184693 128184733 41 GACTCAAAGAAGAAGCTGGCCTGCGGGGCAGTGCTCATCCA GACTCAAAGAAGAAGCTGGCCTGTGGGGCAGTGCTCATCCA < 41bp 0.761875530288135 0.554260355702051 0.3040798 0.14857736 prediction 0.415230349172169 Functional Loss - PROC ENSG00000115718 CDS Human protein_coding chr2:128184713 chr2:128184716 synonymous SNV . 0 24 hm5C_associated_SNPs_91918 0 0 8 BUD13 POSTAR2 ENCODE chr2:128184700-128184754
64251 chr7 90015351 90015351 1 + G A rs17866354 90015348 + 90015328 90015368 41 TCGCGCCACTGCACTTCAGCCTGGGTGACAGAGCTAGACTC TCGCGCCACTGCACTTCAGCCTGAGTGACAGAGCTAGACTC < 41bp 0.70761209952079 0.480665211224983 0.3690338 0.06098187 prediction 0.415224199041579 Functional Loss - GTPBP10 ENSG00000105793 UTR3 Human protein_coding chr7:90015348 chr7:90015351 . . 0 24 hm5C_associated_SNPs_91923 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:90015314-90015352
64251 chr14 105931448 105931448 1 + G A UCEC 105931445 + 105931425 105931465 41 CCGCAGGCACGGCGCGGCTGCCCGAAGCCTCCCAGAGCCCG CCGCAGGCACGGCGCGGCTGCCCAAAGCCTCCCAGAGCCCG < 41bp 0.81138417367391 0.603772771806419 0.16684684 0.09165749 prediction 0.415222803734981 Functional Loss - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105931445 chr14:105931448 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_91924 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:105931440-105931460
64251 chr19 11032583 11032583 1 + G A rs190843802 11032580 + 11032560 11032600 41 GGAACTGGGACACTTTTTTACACGATGTTGCCGCCGTCCCC GGAACTGGGACACTTTTTTACACAATGTTGCCGCCGTCCCC < 41bp 0.81500958915771 0.60740165269395 0.15347508 0.23255146 prediction 0.415215872927521 Functional Loss - CARM1 ENSG00000142453 UTR3 Human protein_coding chr19:11032580 chr19:11032583 . . 0 24 hm5C_associated_SNPs_91927 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:11032554-11032583
64251 chr7 138916293 138916293 1 + G A rs114144182 138916290 + 138916270 138916310 41 CCGGTGCGGCGGCGCGAGGCCGAGTACCCGGGGCCCGAGCG CCGGTGCGGCGGCGCGAGGCCGAATACCCGGGGCCCGAGCG < 41bp 0.707607570664785 0.480916387305318 0.86859906 0.45468116 prediction 0.41521514132957 Functional Loss - UBN2 ENSG00000157741 CDS Human protein_coding chr7:138916290 chr7:138916293 synonymous SNV . 0 24 hm5C_associated_SNPs_91928 0 0 5 BUD13 POSTAR2 ENCODE chr7:138916258-138916327
64251 chr3 50114561 50114561 1 + G A CESC 50114558 + 50114538 50114578 41 TGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGAGACAA TGTTTGCTCGATATAAAGAACTCAATTAAGAAAGGAGACAA < 41bp 0.707606008217823 0.493137333689542 0.23175451 0.15699133 prediction 0.415212016435647 Functional Loss - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50114558 chr3:50114561 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_91930 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:50114547-50114572
64251 chr2 29354162 29354162 1 + G A SKCM 29354159 + 29354139 29354179 41 ATCCTAATGATGCATCATGCCAGGAAATTCTTTTTGATCCC ATCCTAATGATGCATCATGCCAGAAAATTCTTTTTGATCCC < 41bp 0.749944046014721 0.542339395785122 0.33869916 0.15667707 prediction 0.415209300459198 Functional Loss - CLIP4 ENSG00000115295 CDS Human protein_coding chr2:29354159 chr2:29354162 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_91935 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr2:29354150-29354174
64251 chr20 43545480 43545480 1 + C T SKCM 43545477 + 43545457 43545497 41 GCCGCACAGCAGGCCATCAACACCATGAATGGGATGCTGCT GCCGCACAGCAGGCCATCAACACTATGAATGGGATGCTGCT < 41bp 0.742667368569609 0.535064322650092 0.1635415 0.124865174 prediction 0.415206091839035 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545477 chr20:43545480 synonymous SNV . 0 24 hm5C_associated_SNPs_91936 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917662 chr20:43545460-43545480
64251 chr19 50180570 50180570 1 + G A LIHC 50180567 + 50180547 50180587 41 GCCGAGGCCGCGAACTGCATCATGGAGGTGAGCGCTTGGAG GCCGAGGCCGCGAACTGCATCATAGAGGTGAGCGCTTGGAG < 41bp 0.759501010650121 0.551900419014227 0.5461771 0.46881452 prediction 0.41520118327179 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50180567 chr19:50180570 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_91938 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr19:50180550-50180574
64251 chr1 107979396 107979396 1 + A C rs480392 107979392 + 107979372 107979412 41 TAAGTGTGATGAGTGTCTGCCGGGAAATTCCTGGCACTACG TAAGTGTGATGAGTGTCTGCCGGGCAATTCCTGGCACTACG < 41bp 0.707594322270986 0.338912596764796 0.8912039 0.8782612 prediction 0.415188644541972 Functional Loss - NTNG1 ENSG00000162631 CDS Human protein_coding chr1:107979392 chr1:107979396 synonymous SNV . 0 25 hm5C_associated_SNPs_91944 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:107979385-107979406
64251 chr22 46708101 46708101 1 + C T ESCA 46708098 + 46708078 46708118 41 TCCCAGCTGAGAAGGAATCCCACCGGGATGTTCTCCCTGAC TCCCAGCTGAGAAGGAATCCCACTGGGATGTTCTCCCTGAC < 41bp 0.756751110664057 0.549160075592743 0.1795702 0.25460702 prediction 0.415182070142627 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46708098 chr22:46708101 nonsynonymous SNV 0.001 3 24 hm5C_associated_SNPs_91945 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:46708065-46708103
64251 chr20 48604461 48604461 1 + C T LUAD 48604458 + 48604438 48604478 41 AGCCGTGCCTTCGCTGACCGCTCCAACCTGCGGGCCCACCT AGCCGTGCCTTCGCTGACCGCTCTAACCTGCGGGCCCACCT < 41bp 0.773534180167973 0.565943913020653 0.8772447 0.85448444 prediction 0.41518053429464 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48604458 chr20:48604461 synonymous SNV . 0 24 hm5C_associated_SNPs_91946 0 0 1 IGF2BP2 POSTAR2 ENCODE chr20:48604458-48604479
64251 chr20 11903472 11903472 1 + C T COAD 11903469 + 11903449 11903489 41 TCGAGGAGCCAGACCTGACCCAGCGTTGCTGGGAGGTGATT TCGAGGAGCCAGACCTGACCCAGTGTTGCTGGGAGGTGATT < 41bp 0.737162748072621 0.529573246850541 0.49882868 0.8105856 prediction 0.415179002444161 Functional Loss - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903469 chr20:11903472 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_91948 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:11903447-11903486
64251 chr2 55094020 55094020 1 + G A UCEC 55094017 + 55093997 55094037 41 GCTTGAAACTCCAGTTCATACACGGGTGGGTGGCCTGTCAT GCTTGAAACTCCAGTTCATACACAGGTGGGTGGCCTGTCAT < 41bp 0.801043223092917 0.593454819259407 0.16996104 0.045241058 prediction 0.415176807667019 Functional Loss - EML6 ENSG00000214595 CDS Human protein_coding chr2:55094017 chr2:55094020 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_91949 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831620 chr2:55094020-55094040
64251 chr19 18306903 18306903 1 + T C UCEC 18306902 + 18306882 18306922 41 ACCAGATGCAAGACTGTCTCCTGGCGGACCACCCCCTCTGA ACCAGATGCAAGACTGTCTCCCGGCGGACCACCCCCTCTGA < 41bp 0.765301813028027 0.557713800771541 0.8966605 0.93333244 prediction 0.415176024512973 Functional Loss - MPV17L2 ENSG00000254858 UTR3 Human protein_coding chr19:18306902 chr19:18306903 . . 0 22 hm5C_associated_SNPs_91950 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:18306870-18306904
64251 chr20 2845881 2845881 1 + G A BLCA 2845878 + 2845858 2845898 41 AGTTCCTAGACCTGTCTCTACATGACACAGTTACCACCCTC AGTTCCTAGACCTGTCTCTACATAACACAGTTACCACCCTC < 41bp 0.707587070275548 0.463686782958468 0.039338976 0.030674815 prediction 0.415174140551096 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2845878 chr20:2845881 nonsynonymous SNV 0.965 1 24 hm5C_associated_SNPs_91952 0 0 1 FUS POSTAR2 GSE43308,GSM1060381 chr20:2845880-2845900
64251 chr6 24403316 24403316 1 + G T LUSC 24403313 + 24403293 24403333 41 TTACCCTGCCTCCTGCCCCGCGCGATGAGACTTCCCCGGCG TTACCCTGCCTCCTGCCCCGCGCTATGAGACTTCCCCGGCG < 41bp 0.932358065877105 0.724778302465987 0.6257125 0.233883 prediction 0.415159526822237 Functional Loss - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24403313 chr6:24403316 synonymous SNV . 0 24 hm5C_associated_SNPs_91958 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:24403316-24403317
64251 chr2 16082311 16082311 1 + C T SKCM 16082309 + 16082289 16082329 41 TTCTACTTCGGCGGCCCCGACTCGACCCCCCCGGGGGAGGA TTCTACTTCGGCGGCCCCGACTTGACCCCCCCGGGGGAGGA < 41bp 0.872198011601892 0.664619846291106 0.39880812 0.14272028 prediction 0.415156330621572 Functional Loss - MYCN ENSG00000134323 CDS Human protein_coding chr2:16082309 chr2:16082311 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_91960 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:16082292-16082335
64251 chr6 71571624 71571624 1 + C T COAD 71571622 + 71571602 71571642 41 TTGCATCCCTGGCTGGGATCCACGACGCTTAAATACAGCTT TTGCATCCCTGGCTGGGATCCATGACGCTTAAATACAGCTT < 41bp 0.772081690974499 0.564506296842104 0.120390534 0.17898285 prediction 0.41515078826479 Functional Loss - B3GAT2 ENSG00000112309 CDS Human protein_coding chr6:71571622 chr6:71571624 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_91963 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:71571613-71571634
64251 chr19 4429760 4429760 1 + G A UCEC 4429757 + 4429737 4429777 41 GGAGTGGGAAGAAGAGGAGCCTGGGGAGTCCCTGTCCCACA GGAGTGGGAAGAAGAGGAGCCTGAGGAGTCCCTGTCCCACA < 41bp 0.821416701917789 0.61384287220412 0.9038236 0.62253183 prediction 0.415147659427338 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4429757 chr19:4429760 nonsynonymous SNV 0.829 3 24 hm5C_associated_SNPs_91964 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:4429740-4429760
64251 chr1 150300894 150300894 1 + C T LUSC 150300891 + 150300871 150300911 41 AGAGGTGATCCCTGGGCCTCCATCAGAGAGCCCTGGCATGC AGAGGTGATCCCTGGGCCTCCATTAGAGAGCCCTGGCATGC < 41bp 0.707573162314534 0.483256983196657 0.40449762 0.19565621 prediction 0.415146324629068 Functional Loss - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150300891 chr1:150300894 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_91965 0 0 8 DDX24 POSTAR2 ENCODE chr1:150300833-150300898
64251 chr18 67266701 67266701 1 + G A READ 67266698 + 67266678 67266718 41 ATGCGGTGGCAATCATCTTTCACGATGAAACATCGAAGACA ATGCGGTGGCAATCATCTTTCACAATGAAACATCGAAGACA < 41bp 0.737965839145 0.530392908693658 0.38833565 0.14873907 prediction 0.415145860902683 Functional Loss - DOK6 ENSG00000206052 CDS Human protein_coding chr18:67266698 chr18:67266701 nonsynonymous SNV 0.940 4 24 hm5C_associated_SNPs_91967 0 0 1 PPIG POSTAR2 ENCODE chr18:67266696-67266737
64251 chr3 52242255 52242255 1 + G A UCEC 52242252 + 52242232 52242272 41 GCCAAAAATGGACATCATTTCTGGAACACTTGGTATGTATA GCCAAAAATGGACATCATTTCTGAAACACTTGGTATGTATA < 41bp 0.726096267387091 0.518524399349914 0.4927465 0.14683494 prediction 0.415143736074353 Functional Loss - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52242252 chr3:52242255 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_91969 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:52242240-52242260
64251 chr11 64877254 64877254 1 + C T COAD 64877251 + 64877231 64877271 41 GCGCGGCGGCTGCTGACCCACTACGTGAAGGTGCAGGGCCT GCGCGGCGGCTGCTGACCCACTATGTGAAGGTGCAGGGCCT < 41bp 0.715264574442641 0.50769314851792 0.30478144 0.3539827 prediction 0.415142851849441 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64877251 chr11:64877254 synonymous SNV . 0 24 hm5C_associated_SNPs_91970 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64877227-64877255
64251 chr16 732169 732169 1 - G A UCEC 732171 - 732151 732191 41 ACACAGGTAGTCGGGGATGTCTCGCTTCTGTGGCACAGGGG ACACAGGTAGTCGGGGATGTCTTGCTTCTGTGGCACAGGGG < 41bp 0.795456343485521 0.587885235671928 0.09742451 0.061375856 prediction 0.415142215627187 Functional Loss - STUB1 ENSG00000103266 CDS Human protein_coding chr16:732171 chr16:732169 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_91971 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:732144-732204
64251 chr22 21356808 21356808 1 + G T UCEC 21356804 + 21356784 21356824 41 CGAAAGAACCCGACAAAAACCAGAGCCCGCACTCACTCTCG CGAAAGAACCCGACAAAAACCAGATCCCGCACTCACTCTCG < 41bp 0.735640092689881 0.528072634067652 0.72056466 0.37032378 prediction 0.415134917244458 Functional Loss - THAP7-AS1 ENSG00000230513 ncRNA_exonic Human antisense chr22:21356804 chr22:21356808 . . 0 25 hm5C_associated_SNPs_91974 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:21356804-21356827
64251 chr19 57929366 57929366 1 + C T PAAD 57929363 + 57929343 57929383 41 GACGTTCAGAGACACCTGCACAGCGATGTGATGCTGGAGAA GACGTTCAGAGACACCTGCACAGTGATGTGATGCTGGAGAA < 41bp 0.755885611828268 0.548321702316275 0.21205866 0.21309069 prediction 0.415127819023986 Functional Loss - ZNF17 ENSG00000186272;ENSG00000269533 CDS Human other chr19:57929363 chr19:57929366 synonymous SNV . 0 24 hm5C_associated_SNPs_91976 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:57929339-57929400
64251 chr10 5144389 5144389 1 + C T LGG 5144386 + 5144366 5144406 41 CCTATAGTGCTCTGGGATCTCAACGAGACAAACGATGGTAA CCTATAGTGCTCTGGGATCTCAATGAGACAAACGATGGTAA < 41bp 0.707561531781745 0.493889665024216 0.26130176 0.34205124 prediction 0.41512306356349 Functional Loss - AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5144386 chr10:5144389 stopgain 0.000 1 24 hm5C_associated_SNPs_91978 0 0 1 RPS3 POSTAR2 ENCODE chr10:5144337-5144403
64251 chr5 175717216 175717216 1 + C T rs72645798 175717213 + 175717193 175717233 41 CCTGCGACCTTTGCCATGCCCACCGAGAGCCTCACCATGTC CCTGCGACCTTTGCCATGCCCACTGAGAGCCTCACCATGTC < 41bp 0.751438925594199 0.543879193662921 0.07620633 0.08720401 prediction 0.415119463862557 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717213 chr5:175717216 nonsynonymous SNV 0.019 0 24 hm5C_associated_SNPs_91979 0 0 3 AGGF1 POSTAR2 ENCODE chr5:175717187-175717312
64251 chr7 106509130 106509130 1 + G A SKCM 106509127 + 106509107 106509147 41 CATTGATATCCCCGTCCTGCCTCGGAACACCGACCTCACAG CATTGATATCCCCGTCCTGCCTCAGAACACCGACCTCACAG < 41bp 0.819045039431308 0.611486923875544 0.07204887 0.009651691 prediction 0.415116231111528 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106509127 chr7:106509130 nonsynonymous SNV 0.125 1 24 hm5C_associated_SNPs_91980 0 0 1 FMR1 POSTAR2 ENCODE chr7:106509112-106509144
64251 chr17 37879595 37879595 1 + C T COAD 37879592 + 37879572 37879612 41 CCCTCTGACGTCCATCATCTCTGCGGTGGTTGGCATTCTGC CCCTCTGACGTCCATCATCTCTGTGGTGGTTGGCATTCTGC < 41bp 0.740831308948743 0.533274511315994 0.37928528 0.20939532 prediction 0.415113595265498 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37879592 chr17:37879595 nonsynonymous SNV 0.454 0 24 hm5C_associated_SNPs_91982 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:37879594-37879635
64251 chr19 16337256 16337256 1 + C T UCEC 16337253 + 16337233 16337273 41 TCAGCGCCAACGGCAATGTCCTGCGCAGCGAGATCGTGGGC TCAGCGCCAACGGCAATGTCCTGTGCAGCGAGATCGTGGGC < 41bp 0.745044115971505 0.537490491175387 0.13003522 0.10226631 prediction 0.415107249592236 Functional Loss - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16337253 chr19:16337256 nonsynonymous SNV 0.515 4 24 hm5C_associated_SNPs_91985 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:16337230-16337265
64251 chr15 96877515 96877515 1 + G A CESC 96877512 + 96877492 96877532 41 GAACATTTGCGAACTGGCCGCGAGGATGCTCTTCAGCGCCG GAACATTTGCGAACTGGCCGCGAAGATGCTCTTCAGCGCCG < 41bp 0.707548116016719 0.454223973953228 0.88152725 0.4459495 prediction 0.415096232033437 Functional Loss - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877512 chr15:96877515 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_91987 0 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:96877460-96877560
64251 chr21 34925145 34925145 1 + C T rs150717829 34925142 + 34925122 34925162 41 GCCTACAGAGGTGCCATCATCACCATCTGAAGAGTCTGTAT GCCTACAGAGGTGCCATCATCACTATCTGAAGAGTCTGTAT < 41bp 0.746579549869672 0.539032889508109 0.31157246 0.32460988 prediction 0.415093320723126 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34925142 chr21:34925145 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_91991 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:34925100-34925200
64251 chr11 69465940 69465940 1 + C T BRCA 69465937 + 69465917 69465957 41 AAGCCCTGCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAAC AAGCCCTGCTGGAGTCAAGCCTGTGCCAGGCCCAGCAGAAC < 41bp 0.74165928585479 0.53411882889351 0.21384823 0.18383518 prediction 0.41508091392256 Functional Loss - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69465937 chr11:69465940 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_91995 0 0 1 RPS3 POSTAR2 ENCODE chr11:69465894-69465960
64251 chr2 32891802 32891802 1 + T C CHOL 32891801 + 32891781 32891821 41 CCTTTCAAATTGTGAATTCACTCCAGCACCCACTCCTCAGG CCTTTCAAATTGTGAATTCACCCCAGCACCCACTCCTCAGG < 41bp 0.86169228805738 0.654155328458182 0.91633916 0.03310904 prediction 0.415073919198395 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32891801 chr2:32891802 synonymous SNV . 0 22 hm5C_associated_SNPs_91998 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:32891788-32891809
64251 chr14 57858280 57858280 1 + G A UCEC 57858277 + 57858257 57858297 41 CTGCAGCTTAAGAAGCCCTTCGGGCAGGGAGGTTGAGCCTG CTGCAGCTTAAGAAGCCCTTCGGACAGGGAGGTTGAGCCTG < 41bp 0.707536408367525 0.45934900203549 0.38034105 0.26637048 prediction 0.41507281673505 Functional Loss - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57858277 chr14:57858280 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_91999 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:57858260-57858280
64251 chr13 49749622 49749622 1 + G A UCEC 49749619 + 49749599 49749639 41 CTTACAATGGAGTAAGCCCTCAGGAACACCATCAGATGAAG CTTACAATGGAGTAAGCCCTCAGAAACACCATCAGATGAAG < 41bp 0.760615245720905 0.55308447341125 0.43153203 0.23912919 prediction 0.41506154461931 Functional Loss - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49749619 chr13:49749622 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_92005 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:49749595-49749638
64251 chr12 132249157 132249157 1 + C T BLCA 132249154 + 132249134 132249174 41 TAGTGCTGCAAACACTAACCCAGCAGTTGCCCCACCCTGTG TAGTGCTGCAAACACTAACCCAGTAGTTGCCCCACCCTGTG < 41bp 0.765026120996484 0.557495611247677 0.5228463 0.49861813 prediction 0.415061019497613 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132249154 chr12:132249157 nonsynonymous SNV 0.012 1 24 hm5C_associated_SNPs_92006 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:132249125-132249176
64251 chr1 202976926 202976926 1 + C T SKCM 202976924 + 202976904 202976944 41 ACCGTGGCGGATTACGCCAACTCGGATCCGGCGGTCGTGAG ACCGTGGCGGATTACGCCAACTTGGATCCGGCGGTCGTGAG < 41bp 0.844004014517184 0.636474204454157 0.12136185 0.19501042 prediction 0.415059620126054 Functional Loss - TMEM183A;TMEM183B ENSG00000163444 CDS Human protein_coding chr1:202976924 chr1:202976926 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_92007 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:202976895-202976943
64251 chr1 93299177 93299177 1 + G T UCEC 93299175 + 93299155 93299195 41 AAATACAACACACCCAAATACAGGATGATAGTTCGTGTGAC AAATACAACACACCCAAATACATGATGATAGTTCGTGTGAC < 41bp 0.796886524548805 0.589361414594402 0.8107363 0.13400075 prediction 0.415050219908805 Functional Loss - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93299175 chr1:93299177 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_92011 0 0 75 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:93299059-93299209
64251 chr17 33307586 33307586 1 + G A rs12945428 33307583 + 33307563 33307603 41 TCCAACCGTCGTGGGCTGCCCGCGGCCTGTAATGAGCAAGT TCCAACCGTCGTGGGCTGCCCGCAGCCTGTAATGAGCAAGT < 41bp 0.70752472505799 0.490511372773261 0.8683511 0.530451 prediction 0.415049450115981 Functional Loss - LIG3 ENSG00000005156 UTR5 Human protein_coding chr17:33307583 chr17:33307586 . . 0 24 hm5C_associated_SNPs_92012 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33307567-33307596
64251 chr18 33779793 33779793 1 + C T rs142201209 33779790 + 33779770 33779810 41 GGGAGTCGCTTCTGTTACCTCACCGACAGCCACACCTCCGT GGGAGTCGCTTCTGTTACCTCACTGACAGCCACACCTCCGT < 41bp 0.751164156182589 0.543640085530882 0.07673082 0.07559875 prediction 0.415048141303414 Functional Loss - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33779790 chr18:33779793 synonymous SNV . 0 24 hm5C_associated_SNPs_92014 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:33779766-33779794
64251 chr11 5632223 5632223 1 + G T UCEC 5632221 + 5632201 5632241 41 GCCTGGATCCTGGGGGTATGCAGCAATTCACTGGGACCTAC GCCTGGATCCTGGGGGTATGCATCAATTCACTGGGACCTAC < 41bp 0.907948725372983 0.700425943425256 0.31947505 0.13085318 prediction 0.415045563895454 Functional Loss - TRIM6 ENSG00000121236 CDS Human protein_coding chr11:5632221 chr11:5632223 nonsynonymous SNV 0.437 2 23 hm5C_associated_SNPs_92017 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486178 chr11:5632222-5632223
64251 chr9 139697161 139697161 1 + G A KIRC 139697158 + 139697138 139697178 41 AGCTGGACAAGCTGCAGAACCTCGTGGTCAACTACTGCTCA AGCTGGACAAGCTGCAGAACCTCATGGTCAACTACTGCTCA < 41bp 0.707522000268704 0.450705873323023 0.04400611 0.044864595 prediction 0.415044000537408 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139697158 chr9:139697161 nonsynonymous SNV 0.011 3 24 hm5C_associated_SNPs_92018 0 0 5 GRWD1 POSTAR2 ENCODE chr9:139697140-139697215
64251 chr9 139697160 139697160 1 + C T LUAD 139697158 + 139697138 139697178 41 AGCTGGACAAGCTGCAGAACCTCGTGGTCAACTACTGCTCA AGCTGGACAAGCTGCAGAACCTTGTGGTCAACTACTGCTCA < 41bp 0.707522000268704 0.42935851641627 0.04400611 0.02265507 prediction 0.415044000537408 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139697158 chr9:139697160 synonymous SNV . 0 23 hm5C_associated_SNPs_92019 0 0 5 GRWD1 POSTAR2 ENCODE chr9:139697140-139697215
64251 chr16 1557052 1557052 1 + G A UCEC 1557049 + 1557029 1557069 41 ATGTGCCTGGCTGTTAACACCACGGTGAGCCGGGAGAGGTC ATGTGCCTGGCTGTTAACACCACAGTGAGCCGGGAGAGGTC < 41bp 0.81659846584913 0.609076977180477 0.79256654 0.6865998 prediction 0.415042977337306 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1557049 chr16:1557052 synonymous SNV . 0 24 hm5C_associated_SNPs_92022 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:1557042-1557057
64251 chr7 100865949 100865949 1 + C T UCEC 100865946 + 100865926 100865966 41 GCTGCCCGGCAGCGTCGCATCAACCGGCAGCTGGAGGCCCT GCTGCCCGGCAGCGTCGCATCAATCGGCAGCTGGAGGCCCT < 41bp 0.716922128409439 0.509402613161573 0.06080672 0.016530812 prediction 0.415039030495733 Functional Loss - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100865946 chr7:100865949 synonymous SNV . 0 24 hm5C_associated_SNPs_92023 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585673 chr7:100865937-100865970
64251 chr2 64113006 64113006 1 + C T COAD 64113004 + 64112984 64113024 41 CATGGAAGTCACAAATAAAACACGTGCAGATGTAAAGGTAA CATGGAAGTCACAAATAAAACATGTGCAGATGTAAAGGTAA < 41bp 0.70751883138004 0.431448900919222 0.11947021 0.09234545 prediction 0.415037662760081 Functional Loss - UGP2 ENSG00000169764 CDS Human protein_coding chr2:64113004 chr2:64113006 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92024 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:64112962-64113013
64251 chr11 75282867 75282867 1 + G A HNSC 75282864 + 75282844 75282884 41 GGCCTGACTGAGGCCATTGACAAGAACAAGGCCGACTTGTC GGCCTGACTGAGGCCATTGACAAAAACAAGGCCGACTTGTC < 41bp 0.784803755136921 0.577285531994689 0.8145704 0.47379 prediction 0.415036446284463 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75282864 chr11:75282867 synonymous SNV . 0 24 hm5C_associated_SNPs_92025 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr11:75282837-75282873
64251 chr22 26122513 26122513 1 + G T rs41277329 26122509 + 26122489 26122529 41 GGGAGATGATTTGGGCTTCACTGGGATCTGTGACAGGTGGG GGGAGATGATTTGGGCTTCACTGGTATCTGTGACAGGTGGG < 41bp 0.707517390932714 0.488486858718991 0.7667017 0.38720465 prediction 0.415034781865429 Functional Loss - GRK3 ENSG00000100077 UTR3 Human protein_coding chr22:26122509 chr22:26122513 . . 0 25 hm5C_associated_SNPs_92026 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:26122469-26122518
64251 chr22 50962259 50962259 1 - G A rs131811 50962262 - 50962242 50962282 41 AGACTGTTGGGTCTGACCGGCTCCACCAAACAGGTTGCCCA AGACTGTTGGGTCTGACCGGCTCTACCAAACAGGTTGCCCA < 41bp 0.707515957972872 0.488424253949578 0.8785711 0.829088 prediction 0.415031915945745 Functional Loss - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962262 chr22:50962259 synonymous SNV . 0 24 hm5C_associated_SNPs_92028 4 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50962180-50962360
64251 chr17 76200946 76200946 1 + C T UCEC 76200943 + 76200923 76200963 41 ATGGTAGACCAGGTGACCCGCAGCGTTGCGTTTGTCCAGAA ATGGTAGACCAGGTGACCCGCAGTGTTGCGTTTGTCCAGAA < 41bp 0.750393846999551 0.542880931901349 0.41348678 0.35988003 prediction 0.415025830196402 Functional Loss - AFMID ENSG00000183077 CDS Human protein_coding chr17:76200943 chr17:76200946 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_92030 0 0 4 EFTUD2 POSTAR2 ENCODE chr17:76200935-76200972
64251 chr11 65480860 65480860 1 + G A LUAD 65480857 + 65480837 65480877 41 AGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCG AGCGGGAAGACCTTGCCAATCCCAGTCCAGATCACACTCCG < 41bp 0.805245053975779 0.597732693530893 0.47817346 0.26577294 prediction 0.415024720889771 Functional Loss - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65480857 chr11:65480860 synonymous SNV . 0 24 hm5C_associated_SNPs_92031 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65480851-65480877
64251 chr1 82456638 82456638 1 + T C STAD 82456637 + 82456617 82456657 41 ATGGAAGAAGACCTCTCTCCCTCCAGGAGGAGTGAGAATGA ATGGAAGAAGACCTCTCTCCCCCCAGGAGGAGTGAGAATGA < 41bp 0.825787358848811 0.618280322977768 0.92191684 0.029018939 prediction 0.415014071742087 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456637 chr1:82456638 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_92035 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:82456617-82456655
64251 chr5 138266343 138266343 1 + G A ESCA 138266340 + 138266320 138266360 41 GATGGAGATGACAGACTTTACCCGGTGAGCAGCACCCCGGC GATGGAGATGACAGACTTTACCCAGTGAGCAGCACCCCGGC < 41bp 0.813590725337006 0.60608487624829 0.9062781 0.33921355 prediction 0.415011698177432 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266340 chr5:138266343 nonsynonymous SNV 0.972 3 24 hm5C_associated_SNPs_92036 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:138266310-138266343
64251 chr15 76196408 76196408 1 + C T COAD 76196406 + 76196386 76196426 41 GAGGTGGTGGAGCGTGTGCTCACCTTCCTGCCCGCCAAGGC GAGGTGGTGGAGCGTGTGCTCATCTTCCTGCCCGCCAAGGC < 41bp 0.824584006032522 0.617078215395974 0.071742654 0.19001499 prediction 0.415011581273097 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76196406 chr15:76196408 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_92037 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:76196400-76196420
64251 chr17 41477602 41477602 1 + T C ACC 41477601 + 41477581 41477621 41 ACTCTCACTCATGTGCAAGGCTGCAGCGCTGTGGACGGTCT ACTCTCACTCATGTGCAAGGCCGCAGCGCTGTGGACGGTCT < 41bp 0.824668922352141 0.617166055661585 0.30850738 0.2757491 prediction 0.415005733381111 Functional Loss - ARL4D ENSG00000175906 CDS Human protein_coding chr17:41477601 chr17:41477602 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_92041 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:41477572-41477606
64251 chr1 100477024 100477024 1 + G A LGG 100477021 + 100477001 100477041 41 ATGTTTTTCAAGTGGCTTTGCTGGGGTTTACTTTGAGAAAA ATGTTTTTCAAGTGGCTTTGCTGAGGTTTACTTTGAGAAAA < 41bp 0.786355593230445 0.578852733978913 0.67537737 0.21694976 prediction 0.415005718503063 Functional Loss - SLC35A3 ENSG00000117620 CDS Human protein_coding chr1:100477021 chr1:100477024 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_92042 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:100476990-100477050
64251 chr3 195953981 195953981 1 + G A PRAD 195953978 + 195953958 195953998 41 CGGACTCTGCTCTGGAAGAGCTCGGCACCCACGGTGAGGCC CGGACTCTGCTCTGGAAGAGCTCAGCACCCACGGTGAGGCC < 41bp 0.823169815061351 0.615669347914262 0.39528087 0.26645577 prediction 0.415000934294177 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195953978 chr3:195953981 synonymous SNV . 0 24 hm5C_associated_SNPs_92044 0 0 3 BUD13 POSTAR2 ENCODE chr3:195953951-195954057
64251 chr12 58121787 58121787 1 + G A SARC 58121784 + 58121764 58121804 41 GACTCTCGATGGCCTGGACCCAGGCATCCCGCTCCTCAAAA GACTCTCGATGGCCTGGACCCAGACATCCCGCTCCTCAAAA < 41bp 0.782972827958128 0.575480651362464 0.8656906 0.5999253 prediction 0.414984353191328 Functional Loss - AGAP2 ENSG00000135439 CDS Human protein_coding chr12:58121784 chr12:58121787 nonsynonymous SNV 0.980 0 24 hm5C_associated_SNPs_92051 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:58121746-58121806
64251 chr7 45928343 45928343 1 + C T STAD 45928341 + 45928321 45928361 41 GCCGGCGCTCCGTGGCAGTGCGCGCCCTGCTCCGCCGAGAA GCCGGCGCTCCGTGGCAGTGCGTGCCCTGCTCCGCCGAGAA < 41bp 0.781178399444443 0.5736894833032 0.37892145 0.37411678 prediction 0.414977832282486 Functional Loss - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45928341 chr7:45928343 nonsynonymous SNV 0.034 3 23 hm5C_associated_SNPs_92057 0 0 8 AUH POSTAR2 ENCODE chr7:45928326-45928345
64251 chr4 113303701 113303701 1 + A T KIRP 113303697 + 113303677 113303717 41 ATGTGATTGGCGCCGGGTTGCAGCAGTTACTGGTAGGAAGA ATGTGATTGGCGCCGGGTTGCAGCTGTTACTGGTAGGAAGA < 41bp 0.707481563003015 0.403751718279157 0.32843745 0.33834726 prediction 0.41496312600603 Functional Loss - ALPK1 ENSG00000073331 CDS Human protein_coding chr4:113303697 chr4:113303701 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_92065 0 0 1 PRPF8 POSTAR2 ENCODE chr4:113303696-113303747
64251 chr17 4800046 4800046 1 + G A UCEC 4800043 + 4800023 4800063 41 GCTCTGTGGAGACGGGCCACCTCGACGGGGTCTTCATGCAC GCTCTGTGGAGACGGGCCACCTCAACGGGGTCTTCATGCAC < 41bp 0.801059286201989 0.593597650239407 0.6833184 0.52938175 prediction 0.414923271925164 Functional Loss - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4800043 chr17:4800046 nonsynonymous SNV 0.982 4 24 hm5C_associated_SNPs_92068 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4800022-4800060
64251 chr17 78972195 78972195 1 + C T SKCM 78972192 + 78972172 78972212 41 ATAGAGCTGCCAGAGGTTCCCTCCGAGCCCCTTCCTGAGAA ATAGAGCTGCCAGAGGTTCCCTCTGAGCCCCTTCCTGAGAA < 41bp 0.757771552992572 0.55031056724315 0.8423083 0.28793406 prediction 0.414921971498843 Functional Loss - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78972192 chr17:78972195 synonymous SNV . 0 24 hm5C_associated_SNPs_92069 0 0 2 GRWD1 POSTAR2 ENCODE chr17:78972175-78972211
64251 chr5 33455121 33455121 1 + C T rs144381018 33455118 + 33455098 33455138 41 GTCTATGGTGGATGTTTATGCTACGGTCCGCCAATAGAAAA GTCTATGGTGGATGTTTATGCTATGGTCCGCCAATAGAAAA < 41bp 0.764488842486667 0.557028311515001 0.012412071 0.024169624 prediction 0.414921061943334 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33455118 chr5:33455121 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_92070 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33455077-33455165
64251 chr5 139907915 139907915 1 + G A TGCT 139907912 + 139907892 139907932 41 AATTCATGCTAACTTCTCATCTGGAGTAGGTACCACAGCAG AATTCATGCTAACTTCTCATCTGAAGTAGGTACCACAGCAG < 41bp 0.771533007384274 0.564073531033431 0.26281947 0.14889517 prediction 0.414918952701687 Functional Loss - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139907912 chr5:139907915 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_92072 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:139907836-139907947
64251 chr15 38641708 38641708 1 + T C SKCM 38641707 + 38641687 38641727 41 TATCCAAGGAATGTGGAAGCCTAAAGTCCCAAAATAGGGTA TATCCAAGGAATGTGGAAGCCCAAAGTCCCAAAATAGGGTA < 41bp 0.70745849290054 0.450645631300502 0.37785062 0.8752044 prediction 0.414916985801081 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38641707 chr15:38641708 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_92073 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:38641686-38641724
64251 chr21 22804480 22804480 1 + G A HNSC 22804477 + 22804457 22804497 41 ATCATAGAGCTGTCGCAGACCACGGCCAAGGTTTCCTTCAA ATCATAGAGCTGTCGCAGACCACAGCCAAGGTTTCCTTCAA < 41bp 0.707457776355087 0.486841887260173 0.11629167 0.027515173 prediction 0.414915552710174 Functional Loss - NCAM2 ENSG00000154654 CDS Human protein_coding chr21:22804477 chr21:22804480 synonymous SNV . 0 24 hm5C_associated_SNPs_92074 0 0 2 UCHL5 POSTAR2 ENCODE chr21:22804427-22804592
64251 chr1 116607092 116607092 1 + G A COAD 116607089 + 116607069 116607109 41 TGGAACTTGTTCCATGTTCTCCCGAGTTGGTGGGATTATTG TGGAACTTGTTCCATGTTCTCCCAAGTTGGTGGGATTATTG < 41bp 0.707457294941594 0.471016197529755 0.2910787 0.1277954 prediction 0.414914589883188 Functional Loss - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116607089 chr1:116607092 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_92076 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:116607088-116607111
64251 chr6 132215489 132215489 1 + G A rs59958908 132215486 + 132215466 132215506 41 CCCAGGCTAGACTGCAGTGGCATGATCTCGGCTCACTGCAA CCCAGGCTAGACTGCAGTGGCATAATCTCGGCTCACTGCAA < 41bp 0.715179920358116 0.507723656200336 0.80978584 0.75285685 prediction 0.414912528315559 Functional Loss - ENPP1 ENSG00000197594 UTR3 Human protein_coding chr6:132215486 chr6:132215489 . . 0 24 hm5C_associated_SNPs_92078 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:132215473-132215528
64251 chr15 29346822 29346822 1 + C T LUAD 29346819 + 29346799 29346839 41 AGCATGACCAGCATCACCAGCGCCAGTGAGGCCAGCCCCGA AGCATGACCAGCATCACCAGCGCTAGTGAGGCCAGCCCCGA < 41bp 0.771101052492337 0.563645508512253 0.5323477 0.29841954 prediction 0.414911087960168 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346819 chr15:29346822 synonymous SNV . 0 24 hm5C_associated_SNPs_92080 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346776-29346863
64251 chr17 40847712 40847712 1 + G A OV 40847709 + 40847689 40847729 41 ATGTGCCTGGCTACCATGGCCCCGGGTACCGCCTGCCCGAC ATGTGCCTGGCTACCATGGCCCCAGGTACCGCCTGCCCGAC < 41bp 0.707454977148472 0.45157181673986 0.4178943 0.62607807 prediction 0.414909954296944 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40847709 chr17:40847712 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_92081 0 0 2 SND1 POSTAR2 ENCODE chr17:40847671-40847753
64251 chr17 73124936 73124936 1 + C T SKCM 73124933 + 73124913 73124953 41 GCCCGCCGGGCCGCAGCTTTCTCCCAGAGCTGACCGCCACG GCCCGCCGGGCCGCAGCTTTCTCTCAGAGCTGACCGCCACG < 41bp 0.745188793815429 0.53774243507642 0.2798961 0.048894227 prediction 0.414892717478018 Functional Loss - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73124933 chr17:73124936 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_92086 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:73124917-73124950
64251 chr7 36327312 36327312 1 + A T LUAD 36327310 + 36327290 36327330 41 GCCCTGACCCTCCTGGGGAGCGAGAATCCCAGCAAGAATCA GCCCTGACCCTCCTGGGGAGCGTGAATCCCAGCAAGAATCA < 41bp 0.733184427159028 0.525738214608324 0.58639 0.29381776 prediction 0.414892425101408 Functional Loss - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36327310 chr7:36327312 nonsynonymous SNV 0.408 2 23 hm5C_associated_SNPs_92087 0 0 1 GRWD1 POSTAR2 ENCODE chr7:36327296-36327389
64251 chr11 12696363 12696363 1 + G C rs1135606 12696359 + 12696339 12696379 41 TGCCTCGGACTCGCCGGGCGCTGCGGTGGCTCCCTGGGCCG TGCCTCGGACTCGCCGGGCGCTGCCGTGGCTCCCTGGGCCG < 41bp 0.822753703043733 0.615310657829988 0.7996628 0.3234607 prediction 0.41488609042749 Functional Loss - TEAD1 ENSG00000187079 UTR5 Human protein_coding chr11:12696359 chr11:12696363 . . 0 25 hm5C_associated_SNPs_92089 0 0 7 FASTKD2 POSTAR2 ENCODE chr11:12696256-12696381
64251 chr22 27067346 27067346 1 + G A rs543767093 27067343 + 27067323 27067363 41 GGAGGCCTCTGAAGCTGCAGCTGGAGGGGCCGGGGCAGTGT GGAGGCCTCTGAAGCTGCAGCTGAAGGGGCCGGGGCAGTGT < 41bp 0.800091257126234 0.592648344315665 0.7776231 0.76153016 prediction 0.414885825621139 Functional Loss - MIAT ENSG00000225783 ncRNA_exonic Human lincRNA chr22:27067343 chr22:27067346 . . 0 24 hm5C_associated_SNPs_92090 0 0 1 QKI POSTAR2 ENCODE chr22:27067290-27067352
64251 chr3 10127572 10127572 1 + G A SKCM 10127569 + 10127549 10127589 41 TCCTTAGTAGCCGACTGAAACAGGGAGAACACAGCCAGCCT TCCTTAGTAGCCGACTGAAACAGAGAGAACACAGCCAGCCT < 41bp 0.787164260914695 0.579723287070259 0.9432893 0.9179652 prediction 0.414881947688872 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10127569 chr3:10127572 nonsynonymous SNV 0.130 0 24 hm5C_associated_SNPs_92092 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:10127551-10127593
64251 chr2 177054575 177054575 1 + C T COAD 177054573 + 177054553 177054593 41 GGGGCCGCTAGCCCCTCCAGCGCGATCCGCACGAATTTCAG GGGGCCGCTAGCCCCTCCAGCGTGATCCGCACGAATTTCAG < 41bp 0.846180682644276 0.638740002798352 0.3169375 0.68177277 prediction 0.414881359691849 Functional Loss - HOXD1 ENSG00000128645 CDS Human protein_coding chr2:177054573 chr2:177054575 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_92093 0 0 1 PRPF8 POSTAR2 ENCODE chr2:177054525-177054589
64251 chr1 158061246 158061246 1 + C T LIHC 158061243 + 158061223 158061263 41 AGTGGGGTGCTATCCACGCTCACCATCAACAATGTCATGGA AGTGGGGTGCTATCCACGCTCACTATCAACAATGTCATGGA < 41bp 0.798069929525528 0.590630784267142 0.032058448 0.022313207 prediction 0.414878290516774 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158061243 chr1:158061246 synonymous SNV . 0 24 hm5C_associated_SNPs_92096 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158061240-158061289
64251 chr7 156764887 156764887 1 + G A rs3800867 156764884 + 156764864 156764904 41 CTGATGCAAGCCCCCAACCTCACGGACCAAGAGGATCCCTG CTGATGCAAGCCCCCAACCTCACAGACCAAGAGGATCCCTG < 41bp 0.771460518640338 0.56402380025833 0.29297727 0.09512311 prediction 0.414873436764018 Functional Loss - NOM1 ENSG00000146909 UTR3 Human protein_coding chr7:156764884 chr7:156764887 . . 0 24 hm5C_associated_SNPs_92098 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:156764815-156764978
64251 chr15 63335031 63335031 1 + G T COAD 63335028 + 63335008 63335048 41 GGGCCCCTCGCCGCCGCCACCATGGACGCCATCAAGAAGAA GGGCCCCTCGCCGCCGCCACCATTGACGCCATCAAGAAGAA < 41bp 0.707429972357838 0.466518633913606 0.49771821 0.15152481 prediction 0.414859944715677 Functional Loss - TPM1 ENSG00000140416 CDS Human protein_coding chr15:63335028 chr15:63335031 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_92101 0 0 2 GRWD1 POSTAR2 ENCODE chr15:63334959-63335039
64251 chr3 152164529 152164529 1 + G A UCEC 152164526 + 152164506 152164546 41 TCAAATCACTGAAGCGACCCCTCGAGGCAACCTTTGACCTG TCAAATCACTGAAGCGACCCCTCAAGGCAACCTTTGACCTG < 41bp 0.707428165164557 0.484727632069774 0.18892449 0.05696851 prediction 0.414856330329114 Functional Loss - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152164526 chr3:152164529 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_92102 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:152164493-152164541
64251 chr3 10283891 10283891 1 + C T LAML 10283888 + 10283868 10283908 41 TACAAAGAGGAAAAAGTGGACAGCATTGAGCTCTTTGGCCC TACAAAGAGGAAAAAGTGGACAGTATTGAGCTCTTTGGCCC < 41bp 0.726271911910406 0.518844093040413 0.6504374 0.6534053 prediction 0.414855637739986 Functional Loss - IRAK2 ENSG00000134070 CDS Human protein_coding chr3:10283888 chr3:10283891 synonymous SNV . 0 24 hm5C_associated_SNPs_92103 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr3:10283890-10283911
64251 chr3 119217602 119217602 1 + C T SKCM 119217600 + 119217580 119217620 41 CATGGAGGTGCCGCCACCGGCACCGCGGAGCTTTCTCTGTA CATGGAGGTGCCGCCACCGGCATCGCGGAGCTTTCTCTGTA < 41bp 0.707422779217325 0.456128126716316 0.7622323 0.5358152 prediction 0.414845558434649 Functional Loss - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119217600 chr3:119217602 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_92105 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:119217552-119217694
64251 chr11 34144032 34144032 1 + G A rs151136899 34144029 + 34144009 34144049 41 AAAGCTGTCTTGAAATTTATCGAGGGCATCTCTGAAAAGAC AAAGCTGTCTTGAAATTTATCGAAGGCATCTCTGAAAAGAC < 41bp 0.707420385440419 0.455483077070395 0.9348391 0.9077689 prediction 0.414840770880838 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34144029 chr11:34144032 synonymous SNV . 0 24 hm5C_associated_SNPs_92109 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:34144003-34144041
64251 chr11 34144031 34144031 1 + A T STAD 34144029 + 34144009 34144049 41 AAAGCTGTCTTGAAATTTATCGAGGGCATCTCTGAAAAGAC AAAGCTGTCTTGAAATTTATCGTGGGCATCTCTGAAAAGAC < 41bp 0.707420385440419 0.49555683095406 0.9348391 0.88244164 prediction 0.414840770880838 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34144029 chr11:34144031 nonsynonymous SNV 0.892 2 23 hm5C_associated_SNPs_92110 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:34144003-34144041
64251 chr19 11472148 11472148 1 + C T STAD 11472146 + 11472126 11472166 41 GATGCGGCCCTCTGCGCCTACGCGGTCACCTACACAGCGGT GATGCGGCCCTCTGCGCCTACGTGGTCACCTACACAGCGGT < 41bp 0.811281778802677 0.603861956489165 0.7419878 0.8380817 prediction 0.414839644627025 Functional Loss - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11472146 chr19:11472148 nonsynonymous SNV 0.969 2 23 hm5C_associated_SNPs_92111 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:11472126-11472162
64251 chr1 19582531 19582531 1 + C T SKCM 19582528 + 19582508 19582548 41 AAGCTGAAGGACATCCGGAACGCCTGGAAGCACAGCCGGTG AAGCTGAAGGACATCCGGAACGCTTGGAAGCACAGCCGGTG < 41bp 0.731209315135914 0.523790003791005 0.34073615 0.25501823 prediction 0.414838622689818 Functional Loss - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19582528 chr1:19582531 synonymous SNV . 0 24 hm5C_associated_SNPs_92113 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:19582490-19582534
64251 chr20 18297167 18297167 1 + G A COAD 18297164 + 18297144 18297184 41 ACATGTGCAGGCAGTGTGGACTGGGCTTTGGCAATAAGTCA ACATGTGCAGGCAGTGTGGACTGAGCTTTGGCAATAAGTCA < 41bp 0.707417200694445 0.457799641149976 0.36697727 0.18328202 prediction 0.41483440138889 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297164 chr20:18297167 nonsynonymous SNV 0.759 3 24 hm5C_associated_SNPs_92114 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:18297146-18297169
64251 chr2 198571905 198571905 1 + G T ESCA 198571902 + 198571882 198571922 41 ACTTGGCTGGTGAAAGCCCACCGGACCTAGAAACTCAGTTC ACTTGGCTGGTGAAAGCCCACCGTACCTAGAAACTCAGTTC < 41bp 0.707414716893779 0.335991072854579 0.12610984 0.05377215 prediction 0.414829433787559 Functional Loss - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198571902 chr2:198571905 synonymous SNV . 0 24 hm5C_associated_SNPs_92116 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:198571840-198571920
64251 chr10 95658429 95658429 1 + G T UCEC 95658426 + 95658406 95658446 41 CTTTATTTGTTAAAAAAGTGCAAGACGTCCATGCTGTAGAG CTTTATTTGTTAAAAAAGTGCAATACGTCCATGCTGTAGAG < 41bp 0.707411761379441 0.320390512213856 0.29355142 0.05446729 prediction 0.414823522758882 Functional Loss - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95658426 chr10:95658429 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_92117 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr10:95658409-95658446
64251 chr7 102065493 102065493 1 + A C ESCA 102065492 + 102065472 102065512 41 CCCAAGGAGCAGGGGTCCAGCAGCTCTGCGGAGGCATCTGG CCCAAGGAGCAGGGGTCCAGCCGCTCTGCGGAGGCATCTGG < 41bp 0.707403041143199 0.445498339892422 0.541722 0.23983166 prediction 0.414806082286399 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102065492 chr7:102065493 nonsynonymous SNV 0.619 0 22 hm5C_associated_SNPs_92127 0 0 4 GRWD1 POSTAR2 ENCODE chr7:102065488-102065663
64251 chr10 97916465 97916465 1 + G A UCEC 97916462 + 97916442 97916482 41 TTTAAAATGCCGAGACAACACTCGATATAGCCCAAATGATT TTTAAAATGCCGAGACAACACTCAATATAGCCCAAATGATT < 41bp 0.720988060666144 0.513589954765267 0.44407493 0.19667378 prediction 0.414796211801754 Functional Loss - ZNF518A ENSG00000177853 ncRNA_exonic Human protein_coding chr10:97916462 chr10:97916465 . 0.990 0 24 hm5C_associated_SNPs_92129 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr10:97916446-97916466
64251 chr5 148709278 148709278 1 + G T LUAD 148709275 + 148709255 148709295 41 AACCGAGCCGAGGAGGATGCCCGGAGGTACTTGGTAGAAAA AACCGAGCCGAGGAGGATGCCCGTAGGTACTTGGTAGAAAA < 41bp 0.707397961975813 0.313209155211596 0.8518452 0.07051593 prediction 0.414795923951625 Functional Loss - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148709275 chr5:148709278 synonymous SNV . 0 24 hm5C_associated_SNPs_92130 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:148709255-148709292
64251 chr17 61770916 61770916 1 + G A READ 61770913 + 61770893 61770933 41 GGTTCTCTCTTTCCAGGAGCCTGGGCTGCACTGTGGTGGAG GGTTCTCTCTTTCCAGGAGCCTGAGCTGCACTGTGGTGGAG < 41bp 0.707393529854369 0.465162713275536 0.8880068 0.4261385 prediction 0.414787059708738 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61770913 chr17:61770916 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_92133 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:61770911-61770931
64251 chr2 7137100 7137100 1 + G A UCEC 7137097 + 7137077 7137117 41 GGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGC GGCCCACCTGGGACCTGGCCCTCAACCCGCTGGTGTCTTGC < 41bp 0.808811757742895 0.601420820246551 0.8854029 0.20595428 prediction 0.414781874992689 Functional Loss - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7137097 chr2:7137100 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_92134 0 0 2 PPIG POSTAR2 ENCODE chr2:7137078-7137150
64251 chr2 131976095 131976095 1 + G A UCEC 131976092 + 131976072 131976112 41 CCCTGCTACAGGGAGAGCGGCAAGAGCAACGTGGGCACTTC CCCTGCTACAGGGAGAGCGGCAAAAGCAACGTGGGCACTTC < 41bp 0.707381180889766 0.464310779868597 0.62430525 0.48894176 prediction 0.414762361779532 Functional Loss - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976092 chr2:131976095 synonymous SNV . 0 24 hm5C_associated_SNPs_92145 0 0 5 DDX24 POSTAR2 ENCODE chr2:131976061-131976105
64251 chr22 50636393 50636393 1 + G A LUSC 50636390 + 50636370 50636410 41 ACCTACATGCTGCGCCAGGCCGCGCGGCGCCTCGAGCTGCC ACCTACATGCTGCGCCAGGCCGCACGGCGCCTCGAGCTGCC < 41bp 0.817969327208344 0.610592443022934 0.15931872 0.06872624 prediction 0.41475376837082 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636390 chr22:50636393 synonymous SNV . 0 24 hm5C_associated_SNPs_92149 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50636373-50636413
64251 chrX 38547862 38547862 1 + G A rs10333 38547859 + 38547839 38547879 41 AGTTTAGTGCATCTTTGCCTCTCGGTTGAAACCTGTATAAC AGTTTAGTGCATCTTTGCCTCTCAGTTGAAACCTGTATAAC < 41bp 0.707376405748583 0.481712525948577 0.08381313 0.09365761 prediction 0.414752811497165 Functional Loss - TSPAN7 ENSG00000156298 UTR3 Human protein_coding chrX:38547859 chrX:38547862 . . 0 24 hm5C_associated_SNPs_92151 0 0 15 UPF1 POSTAR2 GSE69586,GSM1704214 chrX:38547851-38547872
64251 chr10 131506165 131506165 1 + G A SKCM 131506162 + 131506142 131506182 41 TGTTCTCACTTTTGCAGTGCCGTGGAGGTCCCAGCCCCCGC TGTTCTCACTTTTGCAGTGCCGTAGAGGTCCCAGCCCCCGC < 41bp 0.707367765821161 0.458731256378419 0.70991015 0.43188655 prediction 0.414735531642321 Functional Loss - MGMT ENSG00000170430 CDS Human protein_coding chr10:131506162 chr10:131506165 synonymous SNV . 0 24 hm5C_associated_SNPs_92158 0 0 1 RPS3 POSTAR2 ENCODE chr10:131506157-131506224
64251 chr1 112305598 112305598 1 + G T UCEC 112305596 + 112305576 112305616 41 ATATGATGATGAGAATTGCCCAGAAATGTAATATCAACCTT ATATGATGATGAGAATTGCCCATAAATGTAATATCAACCTT < 41bp 0.707364898919313 0.380279433752116 0.12838489 0.031547606 prediction 0.414729797838626 Functional Loss - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112305596 chr1:112305598 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92161 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:112305588-112305613
64251 chr2 71371643 71371643 1 + C T CESC 71371641 + 71371621 71371661 41 TTCTTAAAATTGGATGCCCTCTCAAACTTCCACTTTATCCC TTCTTAAAATTGGATGCCCTCTTAAACTTCCACTTTATCCC < 41bp 0.70736250406739 0.399545295762022 0.31007272 0.17813137 prediction 0.414725008134779 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71371641 chr2:71371643 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_92163 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:71371636-71371667
64251 chr11 121028666 121028666 1 + C T rs33981325 121028663 + 121028643 121028683 41 GACGAGGAGTGTGCGCTGCGCAACGGGGTGCGCGGCTGCTT GACGAGGAGTGTGCGCTGCGCAATGGGGTGCGCGGCTGCTT < 41bp 0.712381120658707 0.505023662347508 0.15324193 0.20816022 prediction 0.414714916622398 Functional Loss - TECTA ENSG00000109927 CDS Human protein_coding chr11:121028663 chr11:121028666 synonymous SNV . 0 24 hm5C_associated_SNPs_92166 3 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:121028643-121028669
64251 chr18 77896092 77896092 1 + C T SKCM 77896089 + 77896069 77896109 41 AATATGACCCTGGCTGCCATCGCCGTCCATTTGGTGCGCTG AATATGACCCTGGCTGCCATCGCTGTCCATTTGGTGCGCTG < 41bp 0.745675736309828 0.53831861467741 0.8343134 0.21429804 prediction 0.414714243264835 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77896089 chr18:77896092 synonymous SNV . 0 24 hm5C_associated_SNPs_92167 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr18:77896078-77896095
64251 chr16 67915025 67915025 1 + C T COAD 67915022 + 67915002 67915042 41 AGCACAAGAGCCTGGCCTTCCACCGACCACCATATCACCTG AGCACAAGAGCCTGGCCTTCCACTGACCACCATATCACCTG < 41bp 0.735914478820912 0.528561825850187 0.1342772 0.061972678 prediction 0.414705305941449 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67915022 chr16:67915025 stopgain 0.998 1 24 hm5C_associated_SNPs_92170 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:67915006-67915026
64251 chr3 195955119 195955119 1 + T C LIHC 195955118 + 195955098 195955138 41 CCCTGCTGCTGCTGCTGCCCCTGCTGTCCACGGCTGCTGCT CCCTGCTGCTGCTGCTGCCCCCGCTGTCCACGGCTGCTGCT < 41bp 0.707347811120627 0.44989306633449 0.14867046 0.09634626 prediction 0.414695622241253 Functional Loss - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195955118 chr3:195955119 nonsynonymous SNV 0.888 4 22 hm5C_associated_SNPs_92174 0 0 2 GRWD1 POSTAR2 ENCODE chr3:195955087-195955166
64251 chr17 37865600 37865600 1 + C T UCEC 37865597 + 37865577 37865617 41 TGAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCTCTGC TGAAAGGAGGGGTCTTGATCCAGTGGAACCCCCAGCTCTGC < 41bp 0.709657127504597 0.502313682440192 0.9273446 0.9130182 prediction 0.41468689012881 Functional Loss - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37865597 chr17:37865600 nonsynonymous SNV 0.979 3 24 hm5C_associated_SNPs_92178 0 0 3 CDC40 POSTAR2 ENCODE chr17:37865559-37865604
64251 chr9 131454979 131454979 1 + C T STAD 131454976 + 131454956 131454996 41 GGGAGGAAGATGAAGAGGCACTGCATTATTTGACCAGAGTT GGGAGGAAGATGAAGAGGCACTGTATTATTTGACCAGAGTT < 41bp 0.707338574053692 0.474980098672559 0.3396022 0.21532673 prediction 0.414677148107384 Functional Loss - SET ENSG00000119335 CDS Human protein_coding chr9:131454976 chr9:131454979 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_92180 0 0 21 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:131454938-131454996
64251 chr19 10365278 10365278 1 + C T UVM 10365275 + 10365255 10365295 41 CTCCCCGCAGGCTGGACATACTGCACCAGGTTGCTATGTGG CTCCCCGCAGGCTGGACATACTGTACCAGGTTGCTATGTGG < 41bp 0.707334231900742 0.479946979483269 0.23137122 0.17446423 prediction 0.414668463801483 Functional Loss - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10365275 chr19:10365278 nonsynonymous SNV 0.644 3 24 hm5C_associated_SNPs_92185 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:10365260-10365280
64251 chr19 6535064 6535064 1 + C T GBM 6535061 + 6535041 6535081 41 AATCCCAGCCGGACTCCCTTCACCGAGGTCGGAATAACGTC AATCCCAGCCGGACTCCCTTCACTGAGGTCGGAATAACGTC < 41bp 0.71024110880847 0.502914946289297 0.39838886 0.28431052 prediction 0.414652325038347 Functional Loss - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6535061 chr19:6535064 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_92189 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:6535039-6535064
64251 chr22 21357280 21357280 1 + G T UCEC 21357276 + 21357256 21357296 41 TGCCAGATCCTCGCGGGCCTCGGAGAATTCCCCCACTGCCA TGCCAGATCCTCGCGGGCCTCGGATAATTCCCCCACTGCCA < 41bp 0.707320456495168 0.489949279473828 0.9140277 0.90776455 prediction 0.414640912990335 Functional Loss - THAP7-AS1 ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21357276 chr22:21357280 . . 0 25 hm5C_associated_SNPs_92193 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:21357280-21357300
64251 chr11 6503291 6503291 1 + G T UCEC 6503289 + 6503269 6503309 41 TTCTAGGAGGCCTGTCTGCACAGCTGTGCTGGGAAGCTGAT TTCTAGGAGGCCTGTCTGCACATCTGTGCTGGGAAGCTGAT < 41bp 0.707317503427609 0.360590787326268 0.2102631 0.113181114 prediction 0.414635006855217 Functional Loss - TIMM10B ENSG00000132286;ENSG00000265264 CDS Human other chr11:6503289 chr11:6503291 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92195 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr11:6503278-6503307
64251 chr1 51439918 51439918 1 + T C UCEC 51439917 + 51439897 51439937 41 CCTGATGCAGGCAAACGGGGCTGGGGGAGCCACAAATCTTC CCTGATGCAGGCAAACGGGGCCGGGGGAGCCACAAATCTTC < 41bp 0.78742624216138 0.580112252050753 0.57280594 0.75693744 prediction 0.414627980221253 Functional Loss - CDKN2C ENSG00000123080 CDS Human protein_coding chr1:51439917 chr1:51439918 synonymous SNV . 0 22 hm5C_associated_SNPs_92198 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:51439892-51439954
64251 chr11 74716948 74716948 1 + G T UCEC 74716945 + 74716925 74716965 41 ATGTGAAGTGGCAGAGGTGACTGGGAGGGCTGGCCACCCTG ATGTGAAGTGGCAGAGGTGACTGTGAGGGCTGGCCACCCTG < 41bp 0.937788687449854 0.730476111552344 0.73800725 0.16512671 prediction 0.41462515179502 Functional Loss - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74716945 chr11:74716948 nonsynonymous SNV 0.478 2 24 hm5C_associated_SNPs_92199 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:74716872-74716959
64251 chr16 28847379 28847379 1 + G A CESC 28847376 + 28847356 28847396 41 CCCCCCCAAGGCGCGGTGCCCCAGAGTGGGGTGCCTGCACT CCCCCCCAAGGCGCGGTGCCCCAAAGTGGGGTGCCTGCACT < 41bp 0.774089524729476 0.566785213049794 0.8117868 0.54769945 prediction 0.414608623359364 Functional Loss - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847376 chr16:28847379 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_92204 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28847360-28847380
64251 chr2 234366989 234366989 1 + C T UCEC 234366986 + 234366966 234367006 41 GAGGTGGTCGCCGTGTTCGGCAGCATGCAGATGGCCGTCTC GAGGTGGTCGCCGTGTTCGGCAGTATGCAGATGGCCGTCTC < 41bp 0.754738699728464 0.547434606562937 0.6879184 0.7435305 prediction 0.414608186331054 Functional Loss - DGKD ENSG00000077044 CDS Human protein_coding chr2:234366986 chr2:234366989 synonymous SNV . 0 24 hm5C_associated_SNPs_92205 0 0 2 DDX24 POSTAR2 ENCODE chr2:234366899-234367044
64251 chr1 234509369 234509369 1 + G C rs537066023 234509368 + 234509348 234509388 41 CACCGCCGGTTGGTGGCCTGCGTGACAGTTTCCTCCCGTCG CACCGCCGGTTGGTGGCCTGCCTGACAGTTTCCTCCCGTCG < 41bp 0.844640699897595 0.637338669126933 0.48238453 0.10141492 prediction 0.414604061541324 Functional Loss - COA6 ENSG00000168275 CDS Human protein_coding chr1:234509368 chr1:234509369 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_92206 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:234509320-234509380
64251 chr11 12283704 12283704 1 + G A rs150939700 12283701 + 12283681 12283721 41 CCGACACCCAGGGGTGGACCCCCGAGGATGAATGCCTCTAG CCGACACCCAGGGGTGGACCCCCAAGGATGAATGCCTCTAG < 41bp 0.775024051876527 0.567724478965063 0.6836796 0.36635917 prediction 0.414599145822928 Functional Loss - MICAL2 ENSG00000254680 ncRNA_intronic Human antisense chr11:12283701 chr11:12283704 . . 0 24 hm5C_associated_SNPs_92207 0 0 2 UPF1 POSTAR2 ENCODE chr11:12283664-12283706
64251 chr1 48713023 48713023 1 + G A UCEC 48713020 + 48713000 48713040 41 CCTCCAGCCCCAAGCAGGTCCTGGGGAAAGTTGCTCTGGAG CCTCCAGCCCCAAGCAGGTCCTGAGGAAAGTTGCTCTGGAG < 41bp 0.806706715332382 0.59940786100126 0.9077718 0.38281724 prediction 0.414597708662243 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48713020 chr1:48713023 stopgain 0.593 0 24 hm5C_associated_SNPs_92208 0 0 1 EIF3H POSTAR2 ENCODE chr1:48713004-48713028
64251 chr11 12246348 12246348 1 + C T rs140261770 12246345 + 12246325 12246365 41 TGGCCCTGTGTGCCATCATCCACCGCTTCCGGCCTGAGCTC TGGCCCTGTGTGCCATCATCCACTGCTTCCGGCCTGAGCTC < 41bp 0.707289536606988 0.497782257800029 0.13861269 0.11088416 prediction 0.414579073213976 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12246345 chr11:12246348 nonsynonymous SNV 0.997 5 24 hm5C_associated_SNPs_92213 0 0 4 FMR1 POSTAR2 ENCODE chr11:12246233-12246368
64251 chr2 241534095 241534095 1 + G A rs145787041 241534092 + 241534072 241534112 41 CTCACCGTTGGCTACCCGGTCACGGAGGCCGGCCACCTGCA CTCACCGTTGGCTACCCGGTCACAGAGGCCGGCCACCTGCA < 41bp 0.707287498779569 0.454016563109576 0.882207 0.45269045 prediction 0.414574997559138 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241534092 chr2:241534095 synonymous SNV . 0 24 hm5C_associated_SNPs_92215 0 0 3 BUD13 POSTAR2 ENCODE chr2:241534015-241534118
64251 chr22 21800854 21800854 1 + G T LUSC 21800850 + 21800830 21800870 41 CGCGTCACATGCGGAGCCACCTGGGCCTGAAGCCCTTCGCC CGCGTCACATGCGGAGCCACCTGGTCCTGAAGCCCTTCGCC < 41bp 0.725945628944416 0.518661132830023 0.8907131 0.35650107 prediction 0.414568992228786 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800850 chr22:21800854 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_92216 0 0 6 RBM15 POSTAR2 GSE78030,GSM2064710 chr22:21800840-21800860
64251 chr22 41620225 41620225 1 + C T UCEC 41620223 + 41620203 41620243 41 GATCCACCCAGTGGGTTGGTCACGACGTGTGGGCCACGGCA GATCCACCCAGTGGGTTGGTCATGACGTGTGGGCCACGGCA < 41bp 0.854070749878506 0.64678998344238 0.40152165 0.41996738 prediction 0.414561532872251 Functional Loss - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41620223 chr22:41620225 stopgain 0.943 0 23 hm5C_associated_SNPs_92217 0 0 1 FMR1 POSTAR2 ENCODE chr22:41620186-41620258
64251 chrX 103359003 103359003 1 + A T OV 103359001 + 103358981 103359021 41 CCTTTGAAAACTGGCTGATCCAAGTCAATGAGGTCCTGCCA CCTTTGAAAACTGGCTGATCCATGTCAATGAGGTCCTGCCA < 41bp 0.707278712710371 0.487943706455961 0.1677157 0.041708887 prediction 0.414557425420742 Functional Loss - ZCCHC18 ENSG00000166707 CDS Human protein_coding chrX:103359001 chrX:103359003 nonsynonymous SNV 0.915 2 23 hm5C_associated_SNPs_92218 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:103358967-103359005
64251 chr4 3449251 3449251 1 + G T LUAD 3449247 + 3449227 3449267 41 GGGACAGCGTCTCCGTGGTGCTGGGCCAGCACTTCTTCAAC GGGACAGCGTCTCCGTGGTGCTGGTCCAGCACTTCTTCAAC < 41bp 0.758343187417663 0.551076563561881 0.33124065 0.11700326 prediction 0.414533247711564 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3449247 chr4:3449251 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_92227 0 0 1 U2AF2 POSTAR2 ENCODE chr4:3449214-3449254
64251 chr6 96986556 96986556 1 + A C COAD 96986552 + 96986532 96986572 41 TTGAAGATGCTGCCATATTGCTTCAGCAGGTGATGAGGGCA TTGAAGATGCTGCCATATTGCTTCCGCAGGTGATGAGGGCA < 41bp 0.707260476829945 0.291194575764237 0.020240068 0.025437415 prediction 0.41452095365989 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96986552 chr6:96986556 nonsynonymous SNV 0.984 1 25 hm5C_associated_SNPs_92231 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:96986534-96986557
64251 chr22 50957725 50957725 1 + C T SKCM 50957723 + 50957703 50957743 41 CCCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCG CCCCCAAGGCCGCTCTGGAGCCTAAGGAGTCCAGGAGCCCG < 41bp 0.707259812324551 0.446577409128489 0.2295922 0.26287502 prediction 0.414519624649101 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957723 chr22:50957725 synonymous SNV . 0 23 hm5C_associated_SNPs_92233 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:50957686-50957743
64251 chr19 38573068 38573068 1 + C T rs150674546 38573065 + 38573045 38573085 41 GGAGAAGGCCCGGAAGAAACCTGCGCGGGGCCTCGGCGGCG GGAGAAGGCCCGGAAGAAACCTGTGCGGGGCCTCGGCGGCG < 41bp 0.712347483136226 0.505087740069926 0.36440116 0.36336267 prediction 0.414519486132599 Functional Loss - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573065 chr19:38573068 nonsynonymous SNV 0.438 0 24 hm5C_associated_SNPs_92235 0 0 12 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr19:38573060-38573080
64251 chr2 64812640 64812640 1 + G A LUSC 64812637 + 64812617 64812657 41 CAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAG CAAAGTGACTGATGCATTTGCAAAACTCATGTCTACAGTAG < 41bp 0.707259674479863 0.497803089881108 0.2856652 0.054670632 prediction 0.414519348959727 Functional Loss - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64812637 chr2:64812640 nonsynonymous SNV 0.970 0 24 hm5C_associated_SNPs_92236 0 0 3 BUD13 POSTAR2 ENCODE chr2:64812637-64812689
64251 chr1 28157731 28157731 1 + G A rs554778656 28157728 + 28157708 28157748 41 TTGACTGAGTGCCTGGTGCTCTCGTGGAGCATCGCATCTGG TTGACTGAGTGCCTGGTGCTCTCATGGAGCATCGCATCTGG < 41bp 0.707243859811712 0.499478914212431 0.097986996 0.13245058 prediction 0.414487719623424 Functional Loss - PPP1R8 ENSG00000117751 UTR5 Human protein_coding chr1:28157728 chr1:28157731 . . 0 24 hm5C_associated_SNPs_92243 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:28157703-28157731
64251 chr14 62567714 62567714 1 + G A rs185470483 62567711 + 62567691 62567731 41 TAGATCATTGAGTTTTAGTTCAGGGTATGGGGTGAAGCTTC TAGATCATTGAGTTTTAGTTCAGAGTATGGGGTGAAGCTTC < 41bp 0.775364426866526 0.568127826512647 0.90117216 0.5872189 prediction 0.414473200707757 Functional Loss - SYT16 ENSG00000139973 UTR3 Human protein_coding chr14:62567711 chr14:62567714 . . 0 24 hm5C_associated_SNPs_92248 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:62567690-62567717
64251 chr19 19627086 19627086 1 + G C DLBC 19627085 + 19627065 19627105 41 GAAGCAGGACATGCCTCCGCCGGGGGGCTATGGGCCCATCG GAAGCAGGACATGCCTCCGCCCGGGGGCTATGGGCCCATCG < 41bp 0.896583872780063 0.689355344589304 0.9110297 0.91412425 prediction 0.414457056381519 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19627085 chr19:19627086 synonymous SNV . 0 22 hm5C_associated_SNPs_92256 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr6 33636908 33636908 1 + G A UCEC 33636905 + 33636885 33636925 41 AGGCGCGGGCCGGCAACGCCCACGACGAGAATGTGCTCAGC AGGCGCGGGCCGGCAACGCCCACAACGAGAATGTGCTCAGC < 41bp 0.789468861753599 0.582242912955566 0.24566266 0.22978145 prediction 0.414451897596066 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33636905 chr6:33636908 nonsynonymous SNV 0.810 4 24 hm5C_associated_SNPs_92258 0 0 1 UCHL5 POSTAR2 ENCODE chr6:33636869-33636911
64251 chr6 43096778 43096778 1 + G T LUAD 43096774 + 43096754 43096794 41 CCCAGGATGCACTGCAGGGGCGCCGGGCGCTGCTTCGCTGT CCCAGGATGCACTGCAGGGGCGCCTGGCGCTGCTTCGCTGT < 41bp 0.746198565273937 0.538972817440774 0.35568717 0.1415829 prediction 0.414451495666326 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096774 chr6:43096778 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_92259 0 0 4 DDX3X POSTAR2 ENCODE chr6:43096730-43096846
64251 chr19 7676960 7676960 1 + G A SARC 7676957 + 7676937 7676977 41 ATGCCACACCCCGAGACCCCCTCGAAACCATCTCCCTGTCT ATGCCACACCCCGAGACCCCCTCAAAACCATCTCCCTGTCT < 41bp 0.707222681135455 0.452552662577042 0.9314951 0.1683855 prediction 0.414445362270911 Functional Loss - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7676957 chr19:7676960 synonymous SNV . 0 24 hm5C_associated_SNPs_92261 0 0 2 GRWD1 POSTAR2 ENCODE chr19:7676950-7677028
64251 chr16 68390624 68390624 1 + C T UCEC 68390621 + 68390601 68390641 41 CAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGT CAGGCCCGGGCAGAGCCACGCAGTGGTGCTATGGATGGAGT < 41bp 0.737694402553168 0.530485941373283 0.5273111 0.46702996 prediction 0.41441692235977 Functional Loss - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390621 chr16:68390624 nonsynonymous SNV 0.047 0 24 hm5C_associated_SNPs_92266 0 0 4 PRPF8 POSTAR2 ENCODE chr16:68390576-68390650
64251 chr17 37687433 37687433 1 + G A PRAD 37687430 + 37687410 37687450 41 AAACTATGGGGAGCTGGGGCCAGGAACCACTGGGGCCAGCA AAACTATGGGGAGCTGGGGCCAGAAACCACTGGGGCCAGCA < 41bp 0.790743955185713 0.583549660303939 0.88003516 0.54596674 prediction 0.414388589763548 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37687430 chr17:37687433 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_92276 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:37687407-37687434
64251 chr19 10224725 10224725 1 + G A STAD 10224722 + 10224702 10224742 41 GAAGCCACCTGCGACCCAAGCACGCCTGGGCCGTGAGCGCT GAAGCCACCTGCGACCCAAGCACACCTGGGCCGTGAGCGCT < 41bp 0.707190948644325 0.44703759704926 0.28172925 0.12398139 prediction 0.414381897288649 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224722 chr19:10224725 nonsynonymous SNV 0.201 3 24 hm5C_associated_SNPs_92278 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:10224725-10224726
64251 chr19 10224724 10224724 1 + C T UCEC 10224722 + 10224702 10224742 41 GAAGCCACCTGCGACCCAAGCACGCCTGGGCCGTGAGCGCT GAAGCCACCTGCGACCCAAGCATGCCTGGGCCGTGAGCGCT < 41bp 0.707190948644325 0.469736061607794 0.28172925 0.39879465 prediction 0.414381897288649 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224722 chr19:10224724 synonymous SNV . 0 23 hm5C_associated_SNPs_92279 0 0 2 BUD13 POSTAR2 ENCODE chr19:10224702-10224753
64251 chr10 75854095 75854095 1 + G T HNSC 75854093 + 75854073 75854113 41 TGGCCACGGCCCTGCAGAACCTGCAGACCAAAACCAACCGG TGGCCACGGCCCTGCAGAACCTTCAGACCAAAACCAACCGG < 41bp 0.908450190759333 0.701260247743656 0.634604 0.5765632 prediction 0.414379886031353 Functional Loss - VCL ENSG00000035403 CDS Human protein_coding chr10:75854093 chr10:75854095 synonymous SNV . 0 23 hm5C_associated_SNPs_92280 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr10:75854080-75854100
64251 chr17 72436007 72436007 1 + G T LUSC 72436005 + 72435985 72436025 41 CAGGGCCATGTCCCACCCGGCTGCAGCCAAGGCCTCAACCC CAGGGCCATGTCCCACCCGGCTTCAGCCAAGGCCTCAACCC < 41bp 0.707189205298684 0.353469666447142 0.2770983 0.098151505 prediction 0.414378410597368 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436005 chr17:72436007 nonsynonymous SNV 0.865 4 23 hm5C_associated_SNPs_92282 0 0 4 DDX3X POSTAR2 ENCODE chr17:72435936-72436018
64251 chr2 27261663 27261663 1 + A C LUAD 27261662 + 27261642 27261682 41 AGTAACAACCAGGATGTCGTCACCTGTGACATGGCCTGCAA AGTAACAACCAGGATGTCGTCCCCTGTGACATGGCCTGCAA < 41bp 0.8442300475545 0.63704114157219 0.6450331 0.19464824 prediction 0.414377811964619 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27261662 chr2:27261663 nonsynonymous SNV 0.065 0 22 hm5C_associated_SNPs_92283 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:27261637-27261678
64251 chr7 142962174 142962174 1 + G A STAD 142962171 + 142962151 142962191 41 CGTCCCGGGAGCTGTGGATGCGCGTCTGGTCAAGGGTGAGT CGTCCCGGGAGCTGTGGATGCGCATCTGGTCAAGGGTGAGT < 41bp 0.816524833661786 0.609340567601238 0.1317488 0.12830499 prediction 0.414368532121096 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962171 chr7:142962174 nonsynonymous SNV 0.219 0 24 hm5C_associated_SNPs_92284 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:142962146-142962181
64251 chr18 77805847 77805847 1 + G A BLCA 77805844 + 77805824 77805864 41 CCAGTCTGTGTGGGATCGATCATGAGGCGCTCAACAAGCAG CCAGTCTGTGTGGGATCGATCATAAGGCGCTCAACAAGCAG < 41bp 0.707181737235126 0.46273914950305 0.732722 0.34560362 prediction 0.414363474470252 Functional Loss - RBFA ENSG00000101546 CDS Human protein_coding chr18:77805844 chr18:77805847 nonsynonymous SNV 0.274 1 24 hm5C_associated_SNPs_92288 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr18:77805827-77805847
64251 chr22 39411666 39411666 1 + C T COAD 39411663 + 39411643 39411683 41 TTTAAAAACCTATGGGAAGCCAACGATCGGAACGAAACTTG TTTAAAAACCTATGGGAAGCCAATGATCGGAACGAAACTTG < 41bp 0.72906619798716 0.521884840399338 0.06059596 0.28570163 prediction 0.414362715175642 Functional Loss - APOBEC3C ENSG00000244509 CDS Human protein_coding chr22:39411663 chr22:39411666 synonymous SNV . 0 24 hm5C_associated_SNPs_92289 0 0 5 IGF2BP1 POSTAR2 ENCODE chr22:39411603-39411708
64251 chr3 193854002 193854002 1 + G A rs189428526 193853999 + 193853979 193854019 41 GTCTACCTCTCTCCTTGGTCCTGGAACAGCGCTACTGATCA GTCTACCTCTCTCCTTGGTCCTGAAACAGCGCTACTGATCA < 41bp 0.707175332441063 0.475028808958755 0.23180991 0.10545334 prediction 0.414350664882126 Functional Loss - HES1 ENSG00000114315 UTR5 Human protein_coding chr3:193853999 chr3:193854002 . . 0 24 hm5C_associated_SNPs_92294 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:193853939-193854073
64251 chr16 85105479 85105479 1 + G A UCEC 85105476 + 85105456 85105496 41 CGGGAGTGGTTTGCTCGATACGTGAGTGCCCAGGTAAGGGC CGGGAGTGGTTTGCTCGATACGTAAGTGCCCAGGTAAGGGC < 41bp 0.707175057347018 0.451100724078581 0.33230874 0.10315344 prediction 0.414350114694037 Functional Loss - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85105476 chr16:85105479 synonymous SNV . 0 24 hm5C_associated_SNPs_92295 0 0 1 DDX24 POSTAR2 ENCODE chr16:85105447-85105490
64251 chr19 14034211 14034211 1 + T C LUSC 14034210 + 14034190 14034230 41 GCGGCCTGGCCCGGGTCTGTCTCAGGAGGCCGCCCGGCGCT GCGGCCTGGCCCGGGTCTGTCCCAGGAGGCCGCCCGGCGCT < 41bp 0.841294330921412 0.634121156312172 0.12966949 0.23957568 prediction 0.414346349218481 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14034210 chr19:14034211 synonymous SNV . 0 22 hm5C_associated_SNPs_92297 0 0 1 AKAP8L POSTAR2 ENCODE chr19:14034145-14034215
64251 chr9 124535460 124535460 1 + C T UCEC 124535457 + 124535437 124535477 41 CTGCCGCGGAGGAGCTGGCTCGGCGGCCCGGTGAGCTGGCA CTGCCGCGGAGGAGCTGGCTCGGTGGCCCGGTGAGCTGGCA < 41bp 0.713244809291708 0.506078848725326 0.87198764 0.7344699 prediction 0.414331921132763 Functional Loss - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124535457 chr9:124535460 nonsynonymous SNV 0.760 4 24 hm5C_associated_SNPs_92304 0 0 1 PPIG POSTAR2 ENCODE chr9:124535418-124535465
64251 chr20 55027386 55027386 1 + C T SKCM 55027384 + 55027364 55027404 41 GGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCC GGCCATAATTCCTCATGGTTCTTCAGACGGACAACTTCCCC < 41bp 0.707161895973681 0.414987387945144 0.8754003 0.16162062 prediction 0.414323791947363 Functional Loss - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55027384 chr20:55027386 nonsynonymous SNV 0.005 2 23 hm5C_associated_SNPs_92307 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:55027365-55027421
64251 chr20 55027387 55027387 1 + C T SKCM 55027384 + 55027364 55027404 41 GGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCC GGCCATAATTCCTCATGGTTCTCTAGACGGACAACTTCCCC < 41bp 0.707161895973681 0.480022841169624 0.8754003 0.3070932 prediction 0.414323791947363 Functional Loss - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55027384 chr20:55027387 synonymous SNV . 0 24 hm5C_associated_SNPs_92308 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:55027365-55027421
64251 chr20 55027385 55027385 1 + T C STAD 55027384 + 55027364 55027404 41 GGCCATAATTCCTCATGGTTCTCCAGACGGACAACTTCCCC GGCCATAATTCCTCATGGTTCCCCAGACGGACAACTTCCCC < 41bp 0.707161895973681 0.440301112606522 0.8754003 0.08063182 prediction 0.414323791947363 Functional Loss - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55027384 chr20:55027385 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_92309 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:55027365-55027421
64251 chr19 6822268 6822268 1 + C T UCEC 6822265 + 6822245 6822285 41 GAGGATGAGGACCTGTATGACTGCGTGGAGAATGAGGAGGC GAGGATGAGGACCTGTATGACTGTGTGGAGAATGAGGAGGC < 41bp 0.784538872327196 0.577381606876894 0.25235677 0.15044916 prediction 0.414314530900603 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6822265 chr19:6822268 synonymous SNV . 0 24 hm5C_associated_SNPs_92313 0 0 1 FMR1 POSTAR2 ENCODE chr19:6822229-6822328
64251 chr10 101603645 101603645 1 + A T UCEC 101603641 + 101603621 101603661 41 TGAGCGAATAACTGAGTACACAAAAGTGGAAAATGAGGTAA TGAGCGAATAACTGAGTACACAAATGTGGAAAATGAGGTAA < 41bp 0.70714220429541 0.390668453465365 0.28484082 0.1577962 prediction 0.414284408590819 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101603641 chr10:101603645 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_92323 0 0 8 CPSF3 POSTAR2 GSE37401,GSM917669 chr10:101603626-101603655
64251 chr20 44049033 44049033 1 + G C LUAD 44049029 + 44049009 44049049 41 GGAGCCCTGCCCCCTGGCTTCAGAGAGCCGAGTCTATGTGG GGAGCCCTGCCCCCTGGCTTCAGACAGCCGAGTCTATGTGG < 41bp 0.86244467843454 0.655305736990608 0.8878269 0.21690115 prediction 0.414277882887863 Functional Loss - PIGT ENSG00000124155 CDS Human protein_coding chr20:44049029 chr20:44049033 nonsynonymous SNV 0.970 0 25 hm5C_associated_SNPs_92327 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221667 chr20:44049020-44049040
64251 chr19 11486627 11486627 1 + C T CESC 11486625 + 11486605 11486645 41 AGATGGAGAAATGATGATCGCTCCGTGGCCCACCCAGGCTG AGATGGAGAAATGATGATCGCTTCGTGGCCCACCCAGGCTG < 41bp 0.843055629647443 0.635917935189486 0.38044345 0.14676473 prediction 0.414275388915913 Functional Loss - SWSAP1 ENSG00000173928 CDS Human protein_coding chr19:11486625 chr19:11486627 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_92329 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11486609-11486637
64251 chr19 582775 582775 1 + A C rs8637 582771 + 582751 582791 41 TGGCCCGAGGACGCTCCCTGCTCCACGTCTGCGCCGCCGCC TGGCCCGAGGACGCTCCCTGCTCCCCGTCTGCGCCGCCGCC < 41bp 0.707137334151695 0.302243902438737 0.8940474 0.15510842 prediction 0.414274668303389 Functional Loss - BSG ENSG00000172270 UTR3 Human protein_coding chr19:582771 chr19:582775 . . 0 25 hm5C_associated_SNPs_92330 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:582740-582800
64251 chr21 47412705 47412705 1 + G A rs35059000 47412702 + 47412682 47412722 41 ACCACGGGGGACCCCAGGCACGCGGGGACCAAGAGGAGACC ACCACGGGGGACCCCAGGCACGCAGGGACCAAGAGGAGACC < 41bp 0.824273246028061 0.617136901540012 0.5531143 0.11753142 prediction 0.414272688976098 Functional Loss - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47412702 chr21:47412705 nonsynonymous SNV 0.218 4 24 hm5C_associated_SNPs_92331 2 0 2 PPIG POSTAR2 ENCODE chr21:47412673-47412720
64251 chr14 93695018 93695018 1 + G A rs3742709 93695015 + 93694995 93695035 41 CAGAGGGCTCCGTTCAAAGGCTCGGGGTGTCTTTGAGGTTG CAGAGGGCTCCGTTCAAAGGCTCAGGGTGTCTTTGAGGTTG < 41bp 0.771605497480535 0.56448242852629 0.052389592 0.02754888 prediction 0.41424613790849 Functional Loss - UBR7 ENSG00000012963 UTR3 Human protein_coding chr14:93695015 chr14:93695018 . . 0 24 hm5C_associated_SNPs_92349 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:93695006-93695062
64251 chr15 100106208 100106208 1 + G A rs553595669 100106205 + 100106185 100106225 41 GGGGATCCGTGCGCGGATGTCCCGGCGAGTCCCGGGCTGAA GGGGATCCGTGCGCGGATGTCCCAGCGAGTCCCGGGCTGAA < 41bp 0.784458697982528 0.577338825547954 0.8026514 0.7257671 prediction 0.414239744869147 Functional Loss - MEF2A ENSG00000068305 UTR5 Human protein_coding chr15:100106205 chr15:100106208 . . 0 24 hm5C_associated_SNPs_92353 0 0 2 DDX3X POSTAR2 ENCODE chr15:100106183-100106249
64251 chr19 10381886 10381886 1 + C T LUSC 10381884 + 10381864 10381904 41 TGCCCGCACTCCTGGTCCTGCTCGGGGCTCTGTTCCCAGGT TGCCCGCACTCCTGGTCCTGCTTGGGGCTCTGTTCCCAGGT < 41bp 0.796735690372394 0.589626288532413 0.28820127 0.302886 prediction 0.414218803679962 Functional Loss - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10381884 chr19:10381886 synonymous SNV . 0 23 hm5C_associated_SNPs_92360 0 0 3 DDX3X POSTAR2 ENCODE chr19:10381861-10381904
64251 chr11 31805082 31805082 1 + C T UCEC 31805079 + 31805059 31805099 41 ACCTGGACTTCTAGGGATTCCTCCTTAGTCGCTGCATGCAG ACCTGGACTTCTAGGGATTCCTCTTTAGTCGCTGCATGCAG < 41bp 0.758019488012205 0.550912709598727 0.17125309 0.03607753 prediction 0.414213556826957 Functional Loss - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31805079 chr11:31805082 nonsynonymous SNV 0.439 1 24 hm5C_associated_SNPs_92362 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:31805057-31805089
64251 chr17 8193159 8193159 1 + G A rs552055941 8193156 + 8193136 8193176 41 ACAACAGGTCATCTCTTGGCCCCGAAAATCTGTCACCTGCA ACAACAGGTCATCTCTTGGCCCCAAAAATCTGTCACCTGCA < 41bp 0.767736897847645 0.560631817738599 0.02224812 0.014011413 prediction 0.414210160218093 Functional Loss - RANGRF ENSG00000108961 CDS Human protein_coding chr17:8193156 chr17:8193159 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_92364 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:8193128-8193160
64251 chr2 64780404 64780404 1 + G C LUSC 64780403 + 64780383 64780423 41 AGGCTACTGAATCTCATCATCGAAAGGAAGCCTGGCAGTCA AGGCTACTGAATCTCATCATCCAAAGGAAGCCTGGCAGTCA < 41bp 0.707103177116265 0.403240638562746 0.853104 0.3714972 prediction 0.41420635423253 Functional Loss - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64780403 chr2:64780404 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_92365 0 0 2 RBM15 POSTAR2 ENCODE chr2:64780353-64780412
64251 chr3 122419784 122419784 1 + C T UCEC 122419782 + 122419762 122419802 41 CGCTGGGCAGAAGTGCTTCTCTCGGACAGTCTTGGCCCCTG CGCTGGGCAGAAGTGCTTCTCTTGGACAGTCTTGGCCCCTG < 41bp 0.826391199582307 0.61929112499221 0.46854752 0.24171886 prediction 0.414200149180194 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419782 chr3:122419784 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_92369 0 0 3 FMR1 POSTAR2 ENCODE chr3:122419738-122419796
64251 chr12 124241408 124241408 1 + C T COAD 124241405 + 124241385 124241425 41 ATGCTGATGCGCGTGGGCCTCCGCGTTGACACCACCTATGG ATGCTGATGCGCGTGGGCCTCCGTGTTGACACCACCTATGG < 41bp 0.707099456258675 0.491686076173073 0.36845994 0.38823268 prediction 0.41419891251735 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124241405 chr12:124241408 synonymous SNV . 0 24 hm5C_associated_SNPs_92370 0 0 1 PUM2 POSTAR2 ENCODE chr12:124241379-124241409
64251 chr12 93966765 93966765 1 + C T UCEC 93966763 + 93966743 93966783 41 GGGTCGGCGGAGGAGCCATCCCCGCAGGCGGCGCGTCTGGC GGGTCGGCGGAGGAGCCATCCCTGCAGGCGGCGCGTCTGGC < 41bp 0.707097189916718 0.453896760111057 0.2861467 0.31542504 prediction 0.414194379833436 Functional Loss - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93966763 chr12:93966765 nonsynonymous SNV 0.933 0 23 hm5C_associated_SNPs_92372 0 0 2 DDX42 POSTAR2 ENCODE chr12:93966695-93966799
64251 chrX 152027424 152027424 1 + G A UCEC 152027421 + 152027401 152027441 41 AGAGTGAATTACATTGGCACCAAGAATGTCATTGAAACTTG AGAGTGAATTACATTGGCACCAAAAATGTCATTGAAACTTG < 41bp 0.793280420957289 0.5861860461727 0.06583923 0.05276984 prediction 0.414188749569179 Functional Loss - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152027421 chrX:152027424 synonymous SNV . 0 24 hm5C_associated_SNPs_92373 0 0 2 PRPF8 POSTAR2 ENCODE chrX:152027422-152027510
64251 chr6 170169701 170169701 1 + G A CESC 170169698 + 170169678 170169718 41 ATAAGAGATCATTTAAGCCACGGGGAGATCAACTTACATGA ATAAGAGATCATTTAAGCCACGGAGAGATCAACTTACATGA < 41bp 0.810873989958389 0.60378917392726 0.75380224 0.31506854 prediction 0.414169632062257 Functional Loss - ERMARD ENSG00000130023 CDS Human protein_coding chr6:170169698 chr6:170169701 synonymous SNV . 0 24 hm5C_associated_SNPs_92379 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:170169680-170169702
64251 chr16 678531 678531 1 + G A rs199667109 678528 + 678508 678548 41 GCAGCTCTCCTGTGAGGTTGCACGGCATCAGAACCATCCTG GCAGCTCTCCTGTGAGGTTGCACAGCATCAGAACCATCCTG < 41bp 0.707084166569732 0.469768652341369 0.10955274 0.05764839 prediction 0.414168333139463 Functional Loss - RAB40C ENSG00000197562 UTR3 Human protein_coding chr16:678528 chr16:678531 . . 0 24 hm5C_associated_SNPs_92381 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:678520-678540
64251 chr8 144732816 144732816 1 + G T BLCA 144732813 + 144732793 144732833 41 ATTCGCCATCAGAGGATTCACACGGGAGAAAGGCCCTATGA ATTCGCCATCAGAGGATTCACACTGGAGAAAGGCCCTATGA < 41bp 0.937926916434651 0.730843058091202 0.2107346 0.08076298 prediction 0.414167716686898 Functional Loss - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732813 chr8:144732816 synonymous SNV . 0 24 hm5C_associated_SNPs_92382 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:144732778-144732816
64251 chr11 107518311 107518311 1 + G A SKCM 107518308 + 107518288 107518328 41 ACTTTCGAGGAATGGGACTTCTGGGACTGTACAATTTGCAG ACTTTCGAGGAATGGGACTTCTGAGACTGTACAATTTGCAG < 41bp 0.78374417587804 0.576669453679191 0.07003775 0.20998645 prediction 0.414149444397697 Functional Loss - ELMOD1 ENSG00000110675 CDS Human protein_coding chr11:107518308 chr11:107518311 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_92390 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:107518281-107518320
64251 chr21 45220495 45220495 1 + A C UCEC 45220491 + 45220471 45220511 41 AGCGTCTCTACAAAGTGATCCGGAAGTGAGTGTGTGAGGGC AGCGTCTCTACAAAGTGATCCGGACGTGAGTGTGTGAGGGC < 41bp 0.707073833677218 0.29559155590065 0.88573563 0.8752254 prediction 0.414147667354436 Functional Loss - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45220491 chr21:45220495 nonsynonymous SNV 0.883 2 25 hm5C_associated_SNPs_92391 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:45220409-45220520
64251 chr1 8025395 8025395 1 + C T STAD 8025392 + 8025372 8025412 41 TCTTTCTCGTAGATTAAGGTCACCGTTGCAGGCCTGGCTGG TCTTTCTCGTAGATTAAGGTCACTGTTGCAGGCCTGGCTGG < 41bp 0.707071095036842 0.486226691152438 0.038895816 0.01721403 prediction 0.414142190073684 Functional Loss - PARK7 ENSG00000116288 CDS Human protein_coding chr1:8025392 chr1:8025395 synonymous SNV . 0 24 hm5C_associated_SNPs_92396 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:8025380-8025400
64251 chr5 145838686 145838686 1 + G A HNSC 145838683 + 145838663 145838703 41 GCCCAGGCCCAAGCCCAAGCCCAGGCCCAGGCTCAGGCTCA GCCCAGGCCCAAGCCCAAGCCCAAGCCCAGGCTCAGGCTCA < 41bp 0.707063006319376 0.45930406742855 0.276329 0.20882887 prediction 0.414126012638752 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838683 chr5:145838686 synonymous SNV . 0 24 hm5C_associated_SNPs_92402 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr3 111700728 111700728 1 + C T CESC 111700725 + 111700705 111700745 41 GGCAAAAGTCCAGGAATTATCTTCATCCCTGGCTATCTTTC GGCAAAAGTCCAGGAATTATCTTTATCCCTGGCTATCTTTC < 41bp 0.757282237869559 0.550219633651242 0.21068695 0.14332232 prediction 0.414125208436634 Functional Loss - ABHD10 ENSG00000144827 CDS Human protein_coding chr3:111700725 chr3:111700728 synonymous SNV . 0 24 hm5C_associated_SNPs_92404 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:111700720-111700740
64251 chr20 61919072 61919072 1 + C T BLCA 61919069 + 61919049 61919089 41 TGGACGTGCGCGGACACCTCCACCGAGAGGAGGAGCTCGGA TGGACGTGCGCGGACACCTCCACTGAGAGGAGGAGCTCGGA < 41bp 0.707062419233272 0.495673642744593 0.23417693 0.17531794 prediction 0.414124838466543 Functional Loss - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919069 chr20:61919072 synonymous SNV . 0 24 hm5C_associated_SNPs_92405 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61919051-61919076
64251 chr9 140500215 140500215 1 + G A rs200306122 140500212 + 140500192 140500232 41 AGATCAGCCTGAGCCACGGCCGCGTCGTCTACAGCCCCGGG AGATCAGCCTGAGCCACGGCCGCATCGTCTACAGCCCCGGG < 41bp 0.707060647031501 0.461561279486701 0.20063972 0.110717714 prediction 0.414121294063003 Functional Loss - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140500212 chr9:140500215 nonsynonymous SNV 0.962 1 24 hm5C_associated_SNPs_92407 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:140500215-140500216
64251 chr12 96617428 96617428 1 + G A COAD 96617425 + 96617405 96617445 41 GAGCATTTGATCTGCTGGACCTCGAACGATGGTGAATTCAA GAGCATTTGATCTGCTGGACCTCAAACGATGGTGAATTCAA < 41bp 0.788828993875877 0.581769286347518 0.21376497 0.16409236 prediction 0.414119415056719 Functional Loss - ELK3 ENSG00000111145 CDS Human protein_coding chr12:96617425 chr12:96617428 synonymous SNV . 0 24 hm5C_associated_SNPs_92408 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:96617419-96617435
64251 chr12 54379069 54379069 1 + C T LUSC 54379066 + 54379046 54379086 41 GACATGCCCTCGCAATGTAACTCCGAACTCGTACGCGGAGC GACATGCCCTCGCAATGTAACTCTGAACTCGTACGCGGAGC < 41bp 0.713585478712893 0.506527897352939 0.45290765 0.0538868 prediction 0.414115162719908 Functional Loss - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379066 chr12:54379069 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_92409 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:54379059-54379082
64251 chr16 88873025 88873025 1 + G T UCEC 88873021 + 88873001 88873041 41 GCTGCCCCAGCCACCCGCCACGGAGAAGCTCACCACTGCTC GCTGCCCCAGCCACCCGCCACGGATAAGCTCACCACTGCTC < 41bp 0.731011954740107 0.523956654244777 0.84311724 0.54928964 prediction 0.414110600990659 Functional Loss - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873021 chr16:88873025 nonsynonymous SNV 0.100 1 25 hm5C_associated_SNPs_92412 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88872993-88873041
64251 chr2 192278803 192278803 1 + T C GBM 192278802 + 192278782 192278822 41 AACCATTCCAAGGGGCTTACCTGGAAATCAACAAGAACCCC AACCATTCCAAGGGGCTTACCCGGAAATCAACAAGAACCCC < 41bp 0.707052510132875 0.44782816068376 0.28929698 0.3767078 prediction 0.414105020265749 Functional Loss - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192278802 chr2:192278803 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_92416 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:192278803-192278833
64251 chr2 48027887 48027887 1 + G A COAD 48027884 + 48027864 48027904 41 AGCCTTTGACCATGAAAAGGCTCGAAAGACTGGACTTATTA AGCCTTTGACCATGAAAAGGCTCAAAAGACTGGACTTATTA < 41bp 0.714367490667374 0.507318255514382 0.07338104 0.03665346 prediction 0.414098470305984 Functional Loss - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48027884 chr2:48027887 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_92418 2 0 22 FMR1 POSTAR2 GSE39682,GSM977615 chr2:48027771-48027988
64251 chr2 10559988 10559988 1 + C T SKCM 10559986 + 10559966 10560006 41 AGGAGTGGTACAAGGGCTTCCTCAAGGACTGCCCCACCGGC AGGAGTGGTACAAGGGCTTCCTTAAGGACTGCCCCACCGGC < 41bp 0.70704858477734 0.419793563307801 0.59480554 0.27899855 prediction 0.41409716955468 Functional Loss - HPCAL1 ENSG00000115756 CDS Human protein_coding chr2:10559986 chr2:10559988 synonymous SNV . 0 23 hm5C_associated_SNPs_92420 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:10559988-10559989
64251 chr20 23345796 23345796 1 + G T UCEC 23345794 + 23345774 23345814 41 GAGGGTGATGTGGGGGACTACAGGTGTCCCCAGGACCAAAG GAGGGTGATGTGGGGGACTACATGTGTCCCCAGGACCAAAG < 41bp 0.919131781219366 0.712084468063097 0.8946087 0.6397114 prediction 0.414094626312538 Functional Loss - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23345794 chr20:23345796 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_92422 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:23345766-23345804
64251 chr20 18297071 18297071 1 + G T LUAD 18297068 + 18297048 18297088 41 GGGAGAGGCCGTATGTGTGCCGAGAGTGCGGGCGAGGCTTT GGGAGAGGCCGTATGTGTGCCGATAGTGCGGGCGAGGCTTT < 41bp 0.932114203534832 0.725074240555859 0.51712507 0.10136482 prediction 0.414079925957946 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297068 chr20:18297071 stopgain 0.972 0 24 hm5C_associated_SNPs_92427 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:18297059-18297097
64251 chr9 127074867 127074867 1 + G T SARC 127074865 + 127074845 127074885 41 AAGATAGGCCGAGGACAGTTCAGCGAGGTGTACAAGGCCAC AAGATAGGCCGAGGACAGTTCATCGAGGTGTACAAGGCCAC < 41bp 0.707035862438478 0.352475560553143 0.38153684 0.18477184 prediction 0.414071724876956 Functional Loss - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127074865 chr9:127074867 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92429 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:127074842-127074871
64251 chr2 179404190 179404190 1 + A C HNSC 179404186 + 179404166 179404206 41 ACTGGTTTTCTGCTGAAACACGGAAATGGTATTCTACATTC ACTGGTTTTCTGCTGAAACACGGACATGGTATTCTACATTC < 41bp 0.707026761853296 0.326097389431728 0.37837452 0.15275323 prediction 0.414053523706592 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179404186 chr2:179404190 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_92433 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:179404166-179404202
64251 chr19 1219344 1219344 1 + C T COAD 1219341 + 1219321 1219361 41 ACGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGA ACGTATATGGTGATGGAGTACTGTGTGTGTGGCATGCAGGA < 41bp 0.719964335412015 0.512942506172819 0.42722273 0.39637274 prediction 0.414043658478391 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1219341 chr19:1219344 synonymous SNV . 0 24 hm5C_associated_SNPs_92438 3 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:1219323-1219349
64251 chr13 20608481 20608481 1 + G A BLCA 20608478 + 20608458 20608498 41 TTACATATTGCGAATACTGTCAAGAGGAGAAGACTCTTCAT TTACATATTGCGAATACTGTCAAAAGGAGAAGACTCTTCAT < 41bp 0.713456180789556 0.506435549607061 0.7248918 0.26582482 prediction 0.41404126236499 Functional Loss - ZMYM2 ENSG00000121741 CDS Human protein_coding chr13:20608478 chr13:20608481 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_92440 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:20608396-20608545
64251 chr19 49637125 49637125 1 + G A UCEC 49637122 + 49637102 49637142 41 CCCAGCTGGAAGAGAAGAATCAAGAGCTGCAGCGGGTGAGG CCCAGCTGGAAGAGAAGAATCAAAAGCTGCAGCGGGTGAGG < 41bp 0.822212991196145 0.615192686411222 0.7851844 0.5089536 prediction 0.414040609569846 Functional Loss - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49637122 chr19:49637125 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_92441 0 0 3 PPIG POSTAR2 ENCODE chr19:49637074-49637135
64251 chr16 4432163 4432163 1 + G A LIHC 4432160 + 4432140 4432180 41 ACCTGGGGACACGGCACCACCTGGCGTGCTTGTGCCCCGAA ACCTGGGGACACGGCACCACCTGACGTGCTTGTGCCCCGAA < 41bp 0.829422574520021 0.622409757888769 0.6336325 0.25466532 prediction 0.414025633262503 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4432160 chr16:4432163 nonsynonymous SNV 0.082 1 24 hm5C_associated_SNPs_92446 0 0 1 SND1 POSTAR2 ENCODE chr16:4432160-4432230
64251 chr16 57416565 57416565 1 + C T STAD 57416563 + 57416543 57416583 41 ATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTG ATGGGTCCCGTGCCAGCGCACATGGATGCCTTCCAGGACTG < 41bp 0.820371895503486 0.613360504511695 0.42836136 0.370395 prediction 0.414022781983582 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416563 chr16:57416565 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_92447 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416482-57416567
64251 chr1 182829247 182829247 1 + G T UCEC 182829245 + 182829225 182829265 41 CTGGATGTGGGAAAACCACACAGGTTCCCCAGTTCATTCTA CTGGATGTGGGAAAACCACACATGTTCCCCAGTTCATTCTA < 41bp 0.707010477771759 0.361106556929335 0.3718868 0.10099414 prediction 0.414020955543517 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182829245 chr1:182829247 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92449 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:182829238-182829264
64251 chr9 133911631 133911631 1 + C T BLCA 133911628 + 133911608 133911648 41 GCCTGCCGGTGCCAGCACAACACCACCGGCACAGACTGTGA GCCTGCCGGTGCCAGCACAACACTACCGGCACAGACTGTGA < 41bp 0.707010463259352 0.491359925920472 0.2467595 0.21976396 prediction 0.414020926518703 Functional Loss - LAMC3 ENSG00000050555 CDS Human protein_coding chr9:133911628 chr9:133911631 synonymous SNV . 0 24 hm5C_associated_SNPs_92450 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:133911620-133911640
64251 chr4 77231074 77231074 1 + G C KIRC 77231073 + 77231053 77231093 41 TAGAGAATGGGGGAGTTACCCGCTGGGAAGAATGCAGCAAT TAGAGAATGGGGGAGTTACCCCCTGGGAAGAATGCAGCAAT < 41bp 0.70700897424487 0.398087763772657 0.35706604 0.1284309 prediction 0.414017948489741 Functional Loss - STBD1 ENSG00000118804 CDS Human protein_coding chr4:77231073 chr4:77231074 nonsynonymous SNV 0.758 5 22 hm5C_associated_SNPs_92451 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:77231046-77231074
64251 chr14 100996330 100996330 1 + C T rs149360659 100996327 + 100996307 100996347 41 ACCTATCACCCCGTGCTGCCCTCCGTCCTCGCCACCTGCTC ACCTATCACCCCGTGCTGCCCTCTGTCCTCGCCACCTGCTC < 41bp 0.730451396336308 0.523447996022884 0.09757066 0.026970476 prediction 0.414006800626848 Functional Loss - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100996327 chr14:100996330 synonymous SNV . 0 24 hm5C_associated_SNPs_92456 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:100996302-100996343
64251 chr19 49376584 49376584 1 + G A rs3786734 49376581 + 49376561 49376601 41 CAGTGATGGGCCTCCTCAGCCGCGCCTGGAGCCGCCTGAGG CAGTGATGGGCCTCCTCAGCCGCACCTGGAGCCGCCTGAGG < 41bp 0.707000144522765 0.451375365458158 0.32065105 0.17977396 prediction 0.414000289045529 Functional Loss - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376581 chr19:49376584 nonsynonymous SNV 0.945 3 24 hm5C_associated_SNPs_92460 0 0 10 FMR1 POSTAR2 ENCODE chr19:49376561-49376624
64251 chr3 15045485 15045485 1 + C T UCEC 15045482 + 15045462 15045502 41 ACTCTGCTGTAGCCTCACCTCAGCGCATTCAGGTACCTGCA ACTCTGCTGTAGCCTCACCTCAGTGCATTCAGGTACCTGCA < 41bp 0.706994315671765 0.497072388131797 0.64150995 0.3860955 prediction 0.41398863134353 Functional Loss - NR2C2 ENSG00000177463 CDS Human protein_coding chr3:15045482 chr3:15045485 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_92463 0 0 5 DDX24 POSTAR2 ENCODE chr3:15045435-15045493
64251 chr1 156845394 156845394 1 + C T PRAD 156845391 + 156845371 156845411 41 GGTGGCAGCTCCCTGTCCCCCACCGAGGGCAAAGGCTCTGG GGTGGCAGCTCCCTGTCCCCCACTGAGGGCAAAGGCTCTGG < 41bp 0.758275346815938 0.551281962352138 0.10352349 0.11528796 prediction 0.4139867689276 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156845391 chr1:156845394 synonymous SNV . 0 24 hm5C_associated_SNPs_92464 0 0 1 DDX24 POSTAR2 ENCODE chr1:156845391-156845421
64251 chr1 65895679 65895679 1 + G A UCEC 65895676 + 65895656 65895696 41 ACTGGCATATTTCTTCACTACTGGAATTGTTGTTTCTGCCT ACTGGCATATTTCTTCACTACTGAAATTGTTGTTTCTGCCT < 41bp 0.706991506281153 0.470601249286765 0.22371742 0.097628206 prediction 0.413983012562306 Functional Loss - LEPROT ENSG00000213625 CDS Human protein_coding chr1:65895676 chr1:65895679 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_92465 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:65895660-65895684
64251 chr19 36729007 36729007 1 + G A rs112406709 36729004 + 36728984 36729024 41 AAACAACTGAGAAAGCCCATCACGAACAATATGGGAAATTC AAACAACTGAGAAAGCCCATCACAAACAATATGGGAAATTC < 41bp 0.714294165765143 0.507303380027587 0.25253808 0.20319739 prediction 0.413981571475112 Functional Loss - ZNF146 ENSG00000167635 UTR3 Human protein_coding chr19:36729004 chr19:36729007 . . 0 24 hm5C_associated_SNPs_92466 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36728225-36729324
64251 chr16 90001655 90001655 1 + T C LUSC 90001654 + 90001634 90001674 41 CCCTTCCCGCGCCTGCACTTCTTCATGCCCGGCTTCGCCCC CCCTTCCCGCGCCTGCACTTCCTCATGCCCGGCTTCGCCCC < 41bp 0.706990553021972 0.431514542955581 0.33749878 0.16338608 prediction 0.413981106043945 Functional Loss - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001654 chr16:90001655 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_92467 0 0 1 RPS3 POSTAR2 ENCODE chr16:90001652-90001701
64251 chr6 12164583 12164583 1 + T C UCEC 12164582 + 12164562 12164602 41 CTCAGGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCCA CTCAGGCCAGCAGACTCTCTCCCCAGACAGACAGGTTCCCA < 41bp 0.706989922895648 0.445419511535106 0.9080756 0.15349647 prediction 0.413979845791296 Functional Loss - HIVEP1 ENSG00000095951 CDS Human protein_coding chr6:12164582 chr6:12164583 synonymous SNV . 0 22 hm5C_associated_SNPs_92468 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:12164559-12164586
64251 chr5 154173443 154173443 1 + G A UCEC 154173440 + 154173420 154173460 41 TCAAACCGGAGCCTGCCTGGCACGACCAGGATGAGACATCG TCAAACCGGAGCCTGCCTGGCACAACCAGGATGAGACATCG < 41bp 0.798779393740017 0.591789785061441 0.007694185 0.0076321065 prediction 0.413979217357152 Functional Loss - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154173440 chr5:154173443 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_92469 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr5:154173422-154173448
64251 chr19 41928571 41928571 1 + C T STAD 41928569 + 41928549 41928589 41 GGTATGGCATCATGTCAATCCGCGTGGATGGTAATGATGTG GGTATGGCATCATGTCAATCCGTGTGGATGGTAATGATGTG < 41bp 0.706983008637507 0.423715509342579 0.53081244 0.36846504 prediction 0.413966017275013 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41928569 chr19:41928571 synonymous SNV . 0 23 hm5C_associated_SNPs_92476 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:41928543-41928572
64251 chr17 45017780 45017780 1 + G T rs373602816 45017777 + 45017757 45017797 41 GGGTTGCAGCATCTTTAGACCTAGATCTGTCTAACTCTGGG GGGTTGCAGCATCTTTAGACCTATATCTGTCTAACTCTGGG < 41bp 0.706982381564339 0.359849128562021 0.21518338 0.27853674 prediction 0.413964763128678 Functional Loss - GOSR2 ENSG00000108433;ENSG00000262633 intronic Human other chr17:45017777 chr17:45017780 . . 0 24 hm5C_associated_SNPs_92479 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:45017704-45017849
64251 chr3 50677902 50677902 1 + C T HNSC 50677899 + 50677879 50677919 41 TGGATGTGTATGAGAACATGCACCATGGCAAGCGCTGTCTC TGGATGTGTATGAGAACATGCACTATGGCAAGCGCTGTCTC < 41bp 0.774942189734733 0.567960558880862 0.046997517 0.08781898 prediction 0.413963261707741 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50677899 chr3:50677902 nonsynonymous SNV 0.933 0 24 hm5C_associated_SNPs_92480 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr3:50677865-50677910
64251 chr6 30313140 30313140 1 + T C UCEC 30313139 + 30313119 30313159 41 GGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGC GGCGAGGTTTTACTGCTACACCGAGAGGACCATTGCGAAGC < 41bp 0.792426465968518 0.585448094759755 0.3881423 0.3887547 prediction 0.413956742417526 Functional Loss - RPP21;TRIM39-RPP21 ENSG00000241370;ENSG00000248167 CDS Human other chr6:30313139 chr6:30313140 synonymous SNV . 0 22 hm5C_associated_SNPs_92483 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:30313120-30313140
64251 chrX 48386681 48386681 1 + G A UCEC 48386678 + 48386658 48386698 41 AGCACCGCGACGGATTCCAGCACGGAGAGCTGGGCCACCCT AGCACCGCGACGGATTCCAGCACAGAGAGCTGGGCCACCCT < 41bp 0.811308785820437 0.604330443690202 0.22704875 0.16870117 prediction 0.413956684260471 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48386678 chrX:48386681 nonsynonymous SNV 0.771 4 24 hm5C_associated_SNPs_92484 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:48386644-48386689
64251 chr4 4864729 4864729 1 + C T CESC 4864727 + 4864707 4864747 41 CCTTCGGCCTCTCCTTCCCTCTCGGCGGCCCCGCAGCTGTA CCTTCGGCCTCTCCTTCCCTCTTGGCGGCCCCGCAGCTGTA < 41bp 0.834154727849537 0.62718136280565 0.56873834 0.35232878 prediction 0.413946730087774 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864727 chr4:4864729 synonymous SNV . 0 23 hm5C_associated_SNPs_92486 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:4864696-4864744
64251 chrX 105883816 105883816 1 + G T LUAD 105883813 + 105883793 105883833 41 ACCCTCGACCTCTCAAGCAGCTAGAGTAGAAATTCAAGAAA ACCCTCGACCTCTCAAGCAGCTATAGTAGAAATTCAAGAAA < 41bp 0.706971855470192 0.322500319697048 0.18860653 0.19558066 prediction 0.413943710940385 Functional Loss - CXorf57 ENSG00000147231 CDS Human protein_coding chrX:105883813 chrX:105883816 nonsynonymous SNV 0.878 0 24 hm5C_associated_SNPs_92487 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:105883815-105883816
64251 chr9 99212516 99212516 1 + G C rs116903088 99212515 + 99212495 99212535 41 GGCCGCCGGCTTCGCTGAGACGCGCTCGCGTGGGCTGCCCT GGCCGCCGGCTTCGCTGAGACCCGCTCGCGTGGGCTGCCCT < 41bp 0.837303967752399 0.630339643645183 0.6682888 0.41555193 prediction 0.413928648214431 Functional Loss - HABP4 ENSG00000130956 UTR5 Human protein_coding chr9:99212515 chr9:99212516 . . 0 22 hm5C_associated_SNPs_92494 0 0 8 DDX3X POSTAR2 ENCODE chr9:99212489-99212575
64251 chr20 33511229 33511229 1 + G T UCEC 33511226 + 33511206 33511246 41 GTTTCCTGGATACTATGTTACAGGAGATGGTGAGCCTTAGC GTTTCCTGGATACTATGTTACAGTAGATGGTGAGCCTTAGC < 41bp 0.706960589455758 0.393352967271443 0.7765962 0.2803406 prediction 0.413921178911516 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33511226 chr20:33511229 stopgain 0.997 4 24 hm5C_associated_SNPs_92497 0 0 5 GRWD1 POSTAR2 ENCODE chr20:33511201-33511234
64251 chr11 71821156 71821156 1 - G A LUSC 71821159 - 71821139 71821179 41 GATGAATGACTACAATGAGTCACCGGATGATGGAGAGGTCA GATGAATGACTACAATGAGTCACTGGATGATGGAGAGGTCA < 41bp 0.706949864886293 0.482757917863129 0.05229783 0.01362285 prediction 0.413899729772586 Functional Loss - ANAPC15 ENSG00000110200 CDS Human protein_coding chr11:71821159 chr11:71821156 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_92504 1 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:71821150-71821234
64251 chr19 36128214 36128214 1 + G A BLCA 36128211 + 36128191 36128231 41 GGCTACGGCTTCGTCAGCTTCAAGGACCCCAGCGACTACGT GGCTACGGCTTCGTCAGCTTCAAAGACCCCAGCGACTACGT < 41bp 0.814273882276454 0.607327682687938 0.71305525 0.20810232 prediction 0.413892399177032 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36128211 chr19:36128214 synonymous SNV . 0 24 hm5C_associated_SNPs_92507 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36128145-36128229
64251 chr3 49449866 49449866 1 + G T BLCA 49449864 + 49449844 49449884 41 GGGGCGAGGGCCAGTCATGGCGGAGTCCTGGTCTGGGCAGG GGGGCGAGGGCCAGTCATGGCGTAGTCCTGGTCTGGGCAGG < 41bp 0.918842203670773 0.711897166888152 0.90720034 0.52588606 prediction 0.413890073565243 Functional Loss - TCTA ENSG00000145022 CDS Human protein_coding chr3:49449864 chr3:49449866 stopgain 1.000 1 23 hm5C_associated_SNPs_92508 0 0 1 DDX3X POSTAR2 ENCODE chr3:49449856-49449960
64251 chr10 135270831 135270831 1 + C T rs576389126 135270829 + 135270809 135270849 41 GTGAAGGGCCGCAGTCCCTGCGCGGGACTCCCCGAGATCAG GTGAAGGGCCGCAGTCCCTGCGTGGGACTCCCCGAGATCAG < 41bp 0.816795298268106 0.609851144205842 0.5827163 0.4853974 prediction 0.413888308124529 Functional Loss - SCART1 ENSG00000214279 ncRNA_exonic Human protein_coding chr10:135270829 chr10:135270831 . . 0 23 hm5C_associated_SNPs_92509 0 0 1 DROSHA POSTAR2 ENCODE chr10:135270824-135270845
64251 chr19 4409228 4409228 1 + G T COAD 4409225 + 4409205 4409245 41 AATTCTGAAGCCTCTCCCTCCAGGGAGGCAATAAATGGCCA AATTCTGAAGCCTCTCCCTCCAGTGAGGCAATAAATGGCCA < 41bp 0.706944124089034 0.31094683052842 0.5229145 0.056954503 prediction 0.413888248178068 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409225 chr19:4409228 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_92510 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:4409153-4409245
64251 chr17 61571747 61571747 1 + G T SARC 61571743 + 61571723 61571763 41 CACTCGACAGGCTGAAGTACCAGGGCCTCTGCCCCCCAGTG CACTCGACAGGCTGAAGTACCAGGTCCTCTGCCCCCCAGTG < 41bp 0.706942330274981 0.493621474712847 0.934151 0.8560205 prediction 0.413884660549963 Functional Loss - ACE ENSG00000159640;ENSG00000264813 CDS Human other chr17:61571743 chr17:61571747 nonsynonymous SNV 0.974 4 25 hm5C_associated_SNPs_92512 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:61571743-61571769
64251 chr4 109543346 109543346 1 + G T UCEC 109543344 + 109543324 109543364 41 ATCTGCATGTGGTGTGTGCCCAGGCAGACTTCGAGGGGTAA ATCTGCATGTGGTGTGTGCCCATGCAGACTTCGAGGGGTAA < 41bp 0.706941784244213 0.358512739284435 0.8710798 0.19522312 prediction 0.413883568488425 Functional Loss - RPL34 ENSG00000109475 CDS Human protein_coding chr4:109543344 chr4:109543346 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_92514 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr4:109543301-109543353
64251 chr12 53670438 53670438 1 + G A UCEC 53670435 + 53670415 53670455 41 ACAGCCTCAGTGGCTGGGACCCGGAGACCCTGGCCCTCCTG ACAGCCTCAGTGGCTGGGACCCGAAGACCCTGGCCCTCCTG < 41bp 0.706941574653888 0.453135150821517 0.9247553 0.4312439 prediction 0.413883149307776 Functional Loss - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670435 chr12:53670438 nonsynonymous SNV 0.793 1 24 hm5C_associated_SNPs_92515 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53670422-53670456
64251 chr16 57416765 57416765 1 + C T BLCA 57416763 + 57416743 57416783 41 CCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGGTGGGGC CCCTGACGCCCAGGCTGCCACCTGGAGGCAGGCGGTGGGGC < 41bp 0.70694089978896 0.444564366899212 0.6246352 0.7616688 prediction 0.41388179957792 Functional Loss - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416763 chr16:57416765 nonsynonymous SNV 0.189 3 23 hm5C_associated_SNPs_92516 0 0 4 RPS3 POSTAR2 ENCODE chr16:57416733-57416792
64251 chr10 3150938 3150938 1 + G A PRAD 3150935 + 3150915 3150955 41 ATGACACACGTGTGACCATCCTCGGGCACGTGCAGAGAGGA ATGACACACGTGTGACCATCCTCAGGCACGTGCAGAGAGGA < 41bp 0.706940196057152 0.463432313056536 0.14115486 0.10504913 prediction 0.413880392114303 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3150935 chr10:3150938 nonsynonymous SNV 0.841 5 24 hm5C_associated_SNPs_92518 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:3150928-3150946
64251 chr1 26497177 26497177 1 + T C UCEC 26497176 + 26497156 26497196 41 AGTGCCCACGGAAGTGTCCACTGAGGTCCCTGAGATGGATA AGTGCCCACGGAAGTGTCCACCGAGGTCCCTGAGATGGATA < 41bp 0.778769704258094 0.57183489271456 0.38553828 0.8162855 prediction 0.413869623087068 Functional Loss - ZNF593 ENSG00000142684 CDS Human protein_coding chr1:26497176 chr1:26497177 stoploss 0.999 0 22 hm5C_associated_SNPs_92524 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:26497160-26497180
64251 chr17 52992080 52992080 1 + G A rs61739718 52992077 + 52992057 52992097 41 TCTGTAATTGCTCCAAAGAACTCGACTGTTACATTGGTCCC TCTGTAATTGCTCCAAAGAACTCAACTGTTACATTGGTCCC < 41bp 0.788457221741092 0.581530432024182 0.1460582 0.16583335 prediction 0.413853579433821 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52992077 chr17:52992080 synonymous SNV . 0 24 hm5C_associated_SNPs_92530 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:52992049-52992088
64251 chr1 9658529 9658529 1 + A T LUAD 9658527 + 9658507 9658547 41 GGCAGGTATGACGAGGAGGTCGAGGTGTACCGGCATCACCT GGCAGGTATGACGAGGAGGTCGTGGTGTACCGGCATCACCT < 41bp 0.709733441698761 0.502809126195121 0.9121156 0.8929424 prediction 0.413848631007279 Functional Loss - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9658527 chr1:9658529 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_92534 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:9658516-9658541
64251 chr1 150484986 150484986 1 + C T UCEC 150484983 + 150484963 150485003 41 CGGGACATCTTGACCATTGACATCGGTCGAGTCACCCCCAA CGGGACATCTTGACCATTGACATTGGTCGAGTCACCCCCAA < 41bp 0.740117578500674 0.533194845330812 0.4702038 0.28066152 prediction 0.413845466339724 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484983 chr1:150484986 synonymous SNV . 0 24 hm5C_associated_SNPs_92535 0 0 2 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr5 72922098 72922098 1 + G A rs139527887 72922095 + 72922075 72922115 41 CGAGGCGCCCTCAGGCAGGGCGCGGGGGCAGAGCCTCGCCT CGAGGCGCCCTCAGGCAGGGCGCAGGGGCAGAGCCTCGCCT < 41bp 0.769510823513137 0.562592337594848 0.8772638 0.7075329 prediction 0.413836971836578 Functional Loss - ARHGEF28 ENSG00000214944 UTR5 Human protein_coding chr5:72922095 chr5:72922098 . . 0 24 hm5C_associated_SNPs_92540 0 0 3 NCBP2 POSTAR2 ENCODE chr5:72922080-72922150
64251 chr20 46279947 46279947 1 + C T BLCA 46279944 + 46279924 46279964 41 CCTAATGTGACTGCTTCCCCCAGCATGGATGGGCTTTTGGC CCTAATGTGACTGCTTCCCCCAGTATGGATGGGCTTTTGGC < 41bp 0.706918265827527 0.476960965110658 0.21823186 0.09281656 prediction 0.413836531655053 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46279944 chr20:46279947 synonymous SNV . 0 24 hm5C_associated_SNPs_92541 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr20:46279944-46279966
64251 chr4 178256872 178256872 1 + G A CHOL 178256869 + 178256849 178256889 41 TTCGGAATGAAAGGCTTCATCATGATTAATCCACTTGAGTA TTCGGAATGAAAGGCTTCATCATAATTAATCCACTTGAGTA < 41bp 0.706916750172099 0.48422913248653 0.17309767 0.15810198 prediction 0.413833500344197 Functional Loss - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178256869 chr4:178256872 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_92542 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:178256862-178256885
64251 chrX 48382202 48382202 1 + C T UCEC 48382199 + 48382179 48382219 41 CCTTGCACCCATACTGGCCTCAGCACCTAAGACTGGACAAC CCTTGCACCCATACTGGCCTCAGTACCTAAGACTGGACAAC < 41bp 0.746270690929775 0.539355365628335 0.4687127 0.25483465 prediction 0.413830650602879 Functional Loss - EBP ENSG00000147155 CDS Human protein_coding chrX:48382199 chrX:48382202 nonsynonymous SNV 0.948 2 24 hm5C_associated_SNPs_92543 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:48382154-48382228
64251 chr9 90219980 90219980 1 + C T COAD 90219978 + 90219958 90219998 41 CCAGCCGGCGGGGTGTGAGCCGCGAGGACATCGAGCGGGAG CCAGCCGGCGGGGTGTGAGCCGTGAGGACATCGAGCGGGAG < 41bp 0.867449992801411 0.660545139128293 0.45756835 0.32012218 prediction 0.413809707346235 Functional Loss - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90219978 chr9:90219980 synonymous SNV . 0 23 hm5C_associated_SNPs_92551 0 0 5 GRWD1 POSTAR2 ENCODE chr9:90219876-90220002
64251 chrX 51486791 51486791 1 + G T LUAD 51486788 + 51486768 51486808 41 GACCAGGTGGACATGGAATCCCCGGGGTCGGCCCCGAGCGG GACCAGGTGGACATGGAATCCCCTGGGTCGGCCCCGAGCGG < 41bp 0.933740041556117 0.726842007109468 0.89986354 0.72906214 prediction 0.413796068893299 Functional Loss - GSPT2 ENSG00000189369 CDS Human protein_coding chrX:51486788 chrX:51486791 synonymous SNV . 0 24 hm5C_associated_SNPs_92553 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:51486784-51486805
64251 chr1 28081757 28081757 1 + C T LIHC 28081754 + 28081734 28081774 41 CCAGGCACTGACCACTTTGTCATCATTGCCCAACTGAAGGA CCAGGCACTGACCACTTTGTCATTATTGCCCAACTGAAGGA < 41bp 0.770523154560613 0.56362526843775 0.20066765 0.15520903 prediction 0.413795772245726 Functional Loss - FAM76A ENSG00000009780 CDS Human protein_coding chr1:28081754 chr1:28081757 synonymous SNV . 0 24 hm5C_associated_SNPs_92554 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:28081728-28081758
64251 chr19 44500860 44500860 1 + G A OV 44500857 + 44500837 44500877 41 GGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAAT GGAACATAAGAGAATCCATACTGAGGAGAAACCATTCAAAT < 41bp 0.706896744724142 0.471407350706832 0.16873565 0.086105704 prediction 0.413793489448285 Functional Loss - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44500857 chr19:44500860 nonsynonymous SNV 0.494 2 24 hm5C_associated_SNPs_92555 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44500840-44500876
64251 chr7 65579835 65579835 1 + G A COAD 65579832 + 65579812 65579852 41 CGGCATGCAGCGCGGCGATCCCGGCGAGCACCTTGGCGCGC CGGCATGCAGCGCGGCGATCCCGACGAGCACCTTGGCGCGC < 41bp 0.820060593948826 0.613170955774957 0.9058529 0.7971854 prediction 0.413779276347737 Functional Loss - CRCP ENSG00000241258 CDS Human protein_coding chr7:65579832 chr7:65579835 nonsynonymous SNV 0.267 2 24 hm5C_associated_SNPs_92559 0 0 1 DDX3X POSTAR2 ENCODE chr7:65579832-65579903
64251 chr19 49100066 49100066 1 + C T SKCM 49100064 + 49100044 49100084 41 CTGGGCAAGGAGGCACTGGGCTCCGTCGTGGCACACTCAAC CTGGGCAAGGAGGCACTGGGCTTCGTCGTGGCACACTCAAC < 41bp 0.706886469725278 0.426253062142293 0.050262034 0.10501909 prediction 0.413772939450556 Functional Loss - SULT2B1 ENSG00000088002 CDS Human protein_coding chr19:49100064 chr19:49100066 nonsynonymous SNV 0.040 4 23 hm5C_associated_SNPs_92563 0 0 1 SF3B1 POSTAR2 ENCODE chr19:49100033-49100070
64251 chr14 59113798 59113798 1 + G A SKCM 59113795 + 59113775 59113815 41 ATTAAGGCCTCACATAACCTCAAGAAGAAGATCCTCCGCTT ATTAAGGCCTCACATAACCTCAAAAAGAAGATCCTCCGCTT < 41bp 0.796640417160746 0.589755262748773 0.87110364 0.12280598 prediction 0.413770308823946 Functional Loss - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59113795 chr14:59113798 synonymous SNV . 0 24 hm5C_associated_SNPs_92564 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59113776-59113828
64251 chr7 90894043 90894043 1 + A T rs139801070 90894039 + 90894019 90894059 41 TTCCGCGGCGGCGGCGGCTGCGGTACGCAGAACAGGAGCCG TTCCGCGGCGGCGGCGGCTGCGGTTCGCAGAACAGGAGCCG < 41bp 0.818679457586548 0.611796322157668 0.85155106 0.7203325 prediction 0.413766270857759 Functional Loss - FZD1 ENSG00000157240 UTR5 Human protein_coding chr7:90894039 chr7:90894043 . . 0 25 hm5C_associated_SNPs_92566 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr7:90894042-90894043
64251 chr2 27722055 27722055 1 + G A SKCM 27722052 + 27722032 27722072 41 GGACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGAAG GGACAGAAGATAGTGCCTTGCACAGGATTGAGGAACTGAAG < 41bp 0.796078285604924 0.589195259356151 0.6943812 0.36270505 prediction 0.413766052497546 Functional Loss - GCKR ENSG00000084734 CDS Human protein_coding chr2:27722052 chr2:27722055 nonsynonymous SNV 0.770 1 24 hm5C_associated_SNPs_92567 0 0 3 PPIG POSTAR2 ENCODE chr2:27722029-27722075
64251 chr8 27516588 27516588 1 + G A SKCM 27516585 + 27516565 27516605 41 ACTCAGAGAGCATGCACGACCTGGTACTCCAGGTCATGGGC ACTCAGAGAGCATGCACGACCTGATACTCCAGGTCATGGGC < 41bp 0.706875188733637 0.45565325015655 0.5489991 0.4192867 prediction 0.413750377467275 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516585 chr8:27516588 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_92571 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr8:27516580-27516600
64251 chr4 20543209 20543209 1 + G A LUAD 20543206 + 20543186 20543226 41 TCCTGAAAGAAATACCCATCCAGGATGTGGCCATTCAGGAC TCCTGAAAGAAATACCCATCCAGAATGTGGCCATTCAGGAC < 41bp 0.784259406834898 0.577384583004646 0.24034736 0.054823726 prediction 0.413749647660504 Functional Loss - SLIT2 ENSG00000145147 CDS Human protein_coding chr4:20543206 chr4:20543209 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_92572 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:20543180-20543220
64251 chr12 133294633 133294633 1 + G T UCEC 133294629 + 133294609 133294649 41 TTCCGGAACTACATCCACCGCGCAGATGCCAGGCAGGAGGA TTCCGGAACTACATCCACCGCGCATATGCCAGGCAGGAGGA < 41bp 0.724330894025799 0.517459986503747 0.21873066 0.13735637 prediction 0.413741815044103 Functional Loss - PGAM5 ENSG00000247077 CDS Human protein_coding chr12:133294629 chr12:133294633 nonsynonymous SNV 0.103 3 25 hm5C_associated_SNPs_92574 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:133294577-133294665
64251 chr1 227152821 227152821 1 + G A rs150696959 227152818 + 227152798 227152838 41 ACTTCTCTTCAGCCTCCGCTCCCGACCAGTCAGCGCCCCCA ACTTCTCTTCAGCCTCCGCTCCCAACCAGTCAGCGCCCCCA < 41bp 0.706861860475447 0.455751229907511 0.19333088 0.30194622 prediction 0.413723720950894 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227152818 chr1:227152821 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_92579 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:227152795-227152823
64251 chr9 96435963 96435963 1 + G T SARC 96435959 + 96435939 96435979 41 CGACTCCTGCCTGCAGACCACGTGGGGAGCTGGCCAGGCCA CGACTCCTGCCTGCAGACCACGTGTGGAGCTGGCCAGGCCA < 41bp 0.711860497701331 0.505004702730669 0.85131913 0.5276647 prediction 0.413711589941324 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96435959 chr9:96435963 nonsynonymous SNV 0.724 4 25 hm5C_associated_SNPs_92586 0 0 1 TBRG4 POSTAR2 ENCODE chr9:96435939-96435980
64251 chr5 140769076 140769076 1 + C T BLCA 140769074 + 140769054 140769094 41 CAGGGCTCGCCAGCGCTCAGCGCGAACGTGAGCCTGCGCGT CAGGGCTCGCCAGCGCTCAGCGTGAACGTGAGCCTGCGCGT < 41bp 0.746360388147581 0.539505355089789 0.89462054 0.86017907 prediction 0.413710066115583 Functional Loss - PCDHGB4 ENSG00000253953 CDS Human protein_coding chr5:140769074 chr5:140769076 nonsynonymous SNV 0.837 2 23 hm5C_associated_SNPs_92587 0 0 1 SND1 POSTAR2 ENCODE chr5:140769030-140769092
64251 chr12 31820774 31820774 1 + A T STAD 31820772 + 31820752 31820792 41 GCTTCTGGACCTATAGAACTCGAGTACTGATTGGTGACCCT GCTTCTGGACCTATAGAACTCGTGTACTGATTGGTGACCCT < 41bp 0.741834631130216 0.534982609290591 0.113474846 0.14550143 prediction 0.413704043679248 Functional Loss - ETFBKMT ENSG00000139160 CDS Human protein_coding chr12:31820772 chr12:31820774 synonymous SNV . 0 23 hm5C_associated_SNPs_92588 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:31820765-31820800
64251 chr3 50252997 50252997 1 + T C KIRP 50252996 + 50252976 50253016 41 GCATCCGTGCCTATGAGCAGCTGGGCTACCGTGCCTTTGGG GCATCCGTGCCTATGAGCAGCCGGGCTACCGTGCCTTTGGG < 41bp 0.738921838372837 0.532076140153254 0.8349946 0.8605457 prediction 0.413691396439167 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50252996 chr3:50252997 . 0.999 2 22 hm5C_associated_SNPs_92595 0 0 5 EFTUD2 POSTAR2 ENCODE chr3:50252947-50253011
64251 chr1 117957412 117957412 1 + G T UCEC 117957409 + 117957389 117957429 41 TGGGACTTCATGATGAATTCCTAGATGGGCAAAGATGGATT TGGGACTTCATGATGAATTCCTATATGGGCAAAGATGGATT < 41bp 0.706841362486217 0.333680125820217 0.28324795 0.93846726 prediction 0.413682724972435 Functional Loss - MAN1A2 ENSG00000198162 CDS Human protein_coding chr1:117957409 chr1:117957412 nonsynonymous SNV 0.871 2 24 hm5C_associated_SNPs_92598 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:117957362-117957444
64251 chr14 24528595 24528595 1 + G A BLCA 24528592 + 24528572 24528612 41 GTGGATCTGAGCGGCAATGGCATGGAGGACATCGGGGCCAA GTGGATCTGAGCGGCAATGGCATAGAGGACATCGGGGCCAA < 41bp 0.706838386863813 0.460821103963981 0.632269 0.19079462 prediction 0.413676773727627 Functional Loss - CARMIL3 ENSG00000186648 CDS Human protein_coding chr14:24528592 chr14:24528595 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_92601 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:24528592-24528623
64251 chr7 75028289 75028289 1 + G A SKCM 75028286 + 75028266 75028306 41 CCCATCTGCCTGGAGGTCTTCAAGGAGTCCCTAATGCTACA CCCATCTGCCTGGAGGTCTTCAAAGAGTCCCTAATGCTACA < 41bp 0.818508458158149 0.611674016543188 0.3306836 0.17741147 prediction 0.413668883229922 Functional Loss - TRIM73 ENSG00000178809 CDS Human protein_coding chr7:75028286 chr7:75028289 synonymous SNV . 0 24 hm5C_associated_SNPs_92603 0 0 1 RBFOX2 POSTAR2 ENCODE chr7:75028193-75028295
64251 chr1 203022921 203022921 1 + C T COAD 203022918 + 203022898 203022938 41 ACTGCCTGGGATGCTGGCCCCGGCAGCTGGCCCTGCCTTTG ACTGCCTGGGATGCTGGCCCCGGTAGCTGGCCCTGCCTTTG < 41bp 0.707675767807509 0.500842476025516 0.8044555 0.41370815 prediction 0.413666583563986 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203022918 chr1:203022921 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_92604 0 0 4 DDX24 POSTAR2 ENCODE chr1:203022881-203022930
64251 chr19 5667165 5667165 1 + C T SKCM 5667163 + 5667143 5667183 41 GAGCGAGGGCCGGGGGCTGCCTCCTCCCCCCAGGTTTGTGT GAGCGAGGGCCGGGGGCTGCCTTCTCCCCCCAGGTTTGTGT < 41bp 0.706830651550895 0.417368740313989 0.65697044 0.16877821 prediction 0.41366130310179 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667163 chr19:5667165 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_92609 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:5667160-5667180
64251 chr16 129486 129486 1 + G A STAD 129483 + 129463 129503 41 AGAGCAGGGCAGCCACACAGCTCGTCCGACGCAGCCCAGGC AGAGCAGGGCAGCCACACAGCTCATCCGACGCAGCCCAGGC < 41bp 0.823435672373849 0.616606565895997 0.23714048 0.16330627 prediction 0.413658212955703 Functional Loss - MPG ENSG00000103152 CDS Human protein_coding chr16:129483 chr16:129486 synonymous SNV . 0 24 hm5C_associated_SNPs_92612 0 0 1 GRWD1 POSTAR2 ENCODE chr16:129469-129542
64251 chr8 56922570 56922570 1 + G A SKCM 56922567 + 56922547 56922587 41 TATGACATTATGAAAATGTGCTGGAAAGAAAAGGCAGAAGA TATGACATTATGAAAATGTGCTGAAAAGAAAAGGCAGAAGA < 41bp 0.746416616609663 0.539588048301933 0.09641123 0.09996253 prediction 0.413657136615459 Functional Loss - LYN ENSG00000254087 CDS Human protein_coding chr8:56922567 chr8:56922570 stopgain 1.000 1 24 hm5C_associated_SNPs_92614 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:56922558-56922591
64251 chr12 58109590 58109590 1 + C T STAD 58109588 + 58109568 58109608 41 TCTCTGGGGACTACATCGATCGCGTGGACGAGCCCTTGTCC TCTCTGGGGACTACATCGATCGTGTGGACGAGCCCTTGTCC < 41bp 0.851590321068124 0.644762086641101 0.566393 0.39484674 prediction 0.413656468854048 Functional Loss - OS9 ENSG00000135506 CDS Human protein_coding chr12:58109588 chr12:58109590 synonymous SNV . 0 23 hm5C_associated_SNPs_92615 0 0 8 DICER1 POSTAR2 GSE55333,GSM1334288 chr12:58109580-58109599
64251 chr18 47918601 47918601 1 + G A COAD 47918598 + 47918578 47918618 41 GGTCCGAGGGGGAGGACTTACTCGTTATGTTATAACCTGAG GGTCCGAGGGGGAGGACTTACTCATTATGTTATAACCTGAG < 41bp 0.778759028108466 0.571931175835122 0.121190846 0.24828357 prediction 0.413655704546688 Functional Loss - SKA1 ENSG00000154839 CDS Human protein_coding chr18:47918598 chr18:47918601 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_92616 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr18:47918515-47918771
64251 chr5 110428090 110428090 1 + T C LUSC 110428089 + 110428069 110428109 41 GGACTGTTCCACTAGACACGCTGAAGGGACTGGGTACGTGT GGACTGTTCCACTAGACACGCCGAAGGGACTGGGTACGTGT < 41bp 0.764800548529784 0.557976181942569 0.078596115 0.07292974 prediction 0.413648733174429 Functional Loss - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110428089 chr5:110428090 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_92619 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:110428065-110428095
64251 chr15 40763381 40763381 1 + G T rs557892405 40763379 + 40763359 40763399 41 CCAGGCCGCCCTCGGATCGGCCGGGCCCGCGCAGGCCCCCA CCAGGCCGCCCTCGGATCGGCCTGGCCCGCGCAGGCCCCCA < 41bp 0.854628887237829 0.647807197933922 0.45487294 0.13163745 prediction 0.413643378607815 Functional Loss - CHST14 ENSG00000169105 UTR5 Human protein_coding chr15:40763379 chr15:40763381 . . 0 23 hm5C_associated_SNPs_92621 0 0 2 DDX3X POSTAR2 ENCODE chr15:40763343-40763384
64251 chr19 44571071 44571071 1 + C T UCEC 44571068 + 44571048 44571088 41 CCTCCTATCTTTTGATCCATCAGCGAGTCCACACTGGAGAA CCTCCTATCTTTTGATCCATCAGTGAGTCCACACTGGAGAA < 41bp 0.71396872106718 0.507147044361146 0.108314276 0.09965813 prediction 0.413643353412068 Functional Loss - ZNF223 ENSG00000178386;ENSG00000267022 CDS Human other chr19:44571068 chr19:44571071 stopgain 0.069 0 24 hm5C_associated_SNPs_92622 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44571065-44571097
64251 chr10 7773950 7773950 1 + G A HNSC 7773947 + 7773927 7773967 41 GATCAAATAGAGAGCGTTATCACGGCGACTTCGGTACTTCC GATCAAATAGAGAGCGTTATCACAGCGACTTCGGTACTTCC < 41bp 0.793514104106994 0.586693315844499 0.93684566 0.91170716 prediction 0.41364157652499 Functional Loss - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7773947 chr10:7773950 synonymous SNV . 0 24 hm5C_associated_SNPs_92624 0 0 2 SND1 POSTAR2 ENCODE chr10:7773946-7773959
64251 chr21 42647486 42647486 1 + C T CESC 42647483 + 42647463 42647503 41 TGCTGCTGCCGTTCCGGTGTCAGCGTCGCCCCCGTGACCCT TGCTGCTGCCGTTCCGGTGTCAGTGTCGCCCCCGTGACCCT < 41bp 0.731834050007593 0.525015445509094 0.575063 0.2203216 prediction 0.413637208996999 Functional Loss - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42647483 chr21:42647486 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_92626 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr21:42647456-42647487
64251 chr11 64876186 64876186 1 + C T STAD 64876183 + 64876163 64876203 41 TGGGCCACCACCTGCAGGGTCTCCGGGCGGCCTTCCTGGGC TGGGCCACCACCTGCAGGGTCTCTGGGCGGCCTTCCTGGGC < 41bp 0.721040749977709 0.514223237284458 0.9121958 0.52060616 prediction 0.413635025386502 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64876183 chr11:64876186 nonsynonymous SNV 0.155 1 24 hm5C_associated_SNPs_92627 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:64876180-64876200
64251 chr7 73752969 73752969 1 + C T UCEC 73752967 + 73752947 73752987 41 TCTGGGAGAGACGCAGTTCGCACCGGGCCAGTGGGCTGGCG TCTGGGAGAGACGCAGTTCGCATCGGGCCAGTGGGCTGGCG < 41bp 0.845498620669368 0.638685454229233 0.69803596 0.42003843 prediction 0.413626332880271 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73752967 chr7:73752969 nonsynonymous SNV 0.464 4 23 hm5C_associated_SNPs_92630 0 0 1 PPIG POSTAR2 ENCODE chr7:73752901-73753011
64251 chr19 11352175 11352175 1 + C T rs192460764 11352172 + 11352152 11352192 41 GGGCCCTCACAGGCCACGTGCAGCGGCAGAGGCGGGAGATG GGGCCCTCACAGGCCACGTGCAGTGGCAGAGGCGGGAGATG < 41bp 0.71350311769555 0.506693518342192 0.75605077 0.40639186 prediction 0.413619198706716 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11352172 chr19:11352175 nonsynonymous SNV 0.979 3 24 hm5C_associated_SNPs_92633 0 0 4 LARP4 POSTAR2 ENCODE chr19:11352142-11352178
64251 chr12 50452735 50452735 1 + G A UCEC 50452732 + 50452712 50452752 41 GCTGTGCTGCTGTGTGTGTGCACGGAGCGTGTGCAGTACTA GCTGTGCTGCTGTGTGTGTGCACAGAGCGTGTGCAGTACTA < 41bp 0.80920389347966 0.602394914138206 0.29806292 0.146871 prediction 0.413617958682908 Functional Loss - ASIC1 ENSG00000110881 CDS Human protein_coding chr12:50452732 chr12:50452735 synonymous SNV . 0 24 hm5C_associated_SNPs_92634 0 0 2 TAF15 POSTAR2 GSE43294,GSM1060207 chr12:50452720-50452740
64251 chr2 202150022 202150022 1 + T C LUSC 202150021 + 202150001 202150041 41 TCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCGG TCCAGTCACTTTGCCAGAGCCCGAGAGAGCGATGTCCTCGG < 41bp 0.738423291999047 0.531614413921703 0.38227344 0.3542602 prediction 0.413617756154687 Functional Loss - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202150021 chr2:202150022 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_92635 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:202149999-202150037
64251 chr17 8350200 8350200 1 + C T STAD 8350197 + 8350177 8350217 41 AGAGAGCTGGAGCAGGCCAACGACGACCTGGAGCGAGCCAA AGAGAGCTGGAGCAGGCCAACGATGACCTGGAGCGAGCCAA < 41bp 0.70680512087966 0.492186347964823 0.23645175 0.3446287 prediction 0.41361024175932 Functional Loss - NDEL1 ENSG00000166579 CDS Human protein_coding chr17:8350197 chr17:8350200 synonymous SNV . 0 24 hm5C_associated_SNPs_92638 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:8350165-8350204
64251 chrX 152615487 152615487 1 + C T rs375822855 152615484 + 152615464 152615504 41 TCCTGGGAGCCTTGGCAATGCTCCGAGTGGATTCAGTGACT TCCTGGGAGCCTTGGCAATGCTCTGAGTGGATTCAGTGACT < 41bp 0.706805068060039 0.497978905238734 0.31343806 0.3925945 prediction 0.413610136120079 Functional Loss - ZNF275 ENSG00000063587 UTR3 Human protein_coding chrX:152615484 chrX:152615487 . . 0 24 hm5C_associated_SNPs_92639 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:152615478-152615505
64251 chr15 22956330 22956330 1 + G A UCEC 22956327 + 22956307 22956347 41 GGGAGCTGGTGCGGGGCCCTCCCGACCAGGGCGTAGCGGAG GGGAGCTGGTGCGGGGCCCTCCCAACCAGGGCGTAGCGGAG < 41bp 0.706804518542791 0.452026247858656 0.81003416 0.56053346 prediction 0.413609037085582 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22956327 chr15:22956330 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_92640 0 0 1 RBM5 POSTAR2 ENCODE chr15:22956293-22956369
64251 chr19 50188067 50188067 1 + G A rs143994257 50188064 + 50188044 50188084 41 ACGCTGTATGTGACGGCCATCGAGGACCGGCAGTACAAAGA ACGCTGTATGTGACGGCCATCGAAGACCGGCAGTACAAAGA < 41bp 0.813122873818578 0.606322691039789 0.88732815 0.74930495 prediction 0.413600365557577 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50188064 chr19:50188067 synonymous SNV . 0 24 hm5C_associated_SNPs_92644 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50188056-50188088
64251 chr22 41574487 41574487 1 + C T COAD 41574484 + 41574464 41574504 41 GAGCAGAGGCAGGTGCCAGTCTACAGGCCTATCAGCAGCGA GAGCAGAGGCAGGTGCCAGTCTATAGGCCTATCAGCAGCGA < 41bp 0.722279303821784 0.515479219202128 0.83281064 0.41578254 prediction 0.413600169239312 Functional Loss - EP300 ENSG00000100393 CDS Human protein_coding chr22:41574484 chr22:41574487 stopgain 0.985 1 24 hm5C_associated_SNPs_92645 0 0 2 IGF2BP1 POSTAR2 ENCODE chr22:41574459-41574504
64251 chr22 44553883 44553883 1 + G T LUAD 44553880 + 44553860 44553900 41 AGTTTGCAGATGGCGTGTACCTGGTTCTGCTCATGGGCCTT AGTTTGCAGATGGCGTGTACCTGTTTCTGCTCATGGGCCTT < 41bp 0.706799900673004 0.301778868342136 0.42195624 0.11382273 prediction 0.413599801346007 Functional Loss - PARVB ENSG00000188677 CDS Human protein_coding chr22:44553880 chr22:44553883 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_92646 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:44553869-44553904
64251 chr19 46178075 46178075 1 + G C LUAD 46178071 + 46178051 46178091 41 CCTTGGGGACCAGGCCCTTGCGCTGTGGAACCAGGTGGGCA CCTTGGGGACCAGGCCCTTGCGCTCTGGAACCAGGTGGGCA < 41bp 0.706797620365699 0.405485765323645 0.2775707 0.15561777 prediction 0.413595240731399 Functional Loss - GIPR ENSG00000010310 CDS Human protein_coding chr19:46178071 chr19:46178075 synonymous SNV . 0 25 hm5C_associated_SNPs_92649 0 0 1 RBM15 POSTAR2 ENCODE chr19:46178065-46178111
64251 chr5 176867992 176867992 1 + T C UCEC 176867991 + 176867971 176868011 41 TCAGTTCCCCCAGACCTGGACTGGAAGGGCCAGCCACCTGC TCAGTTCCCCCAGACCTGGACCGGAAGGGCCAGCCACCTGC < 41bp 0.840875726806585 0.634078683683965 0.2632951 0.2289932 prediction 0.413594086245241 Functional Loss - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176867991 chr5:176867992 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_92650 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176867954-176868018
64251 chr16 24166132 24166132 1 + G A SKCM 24166129 + 24166109 24166149 41 GAAGCGGGTGTTGGCCCTGCCTGGGAAGCCGCCCTTCCTGA GAAGCGGGTGTTGGCCCTGCCTGAGAAGCCGCCCTTCCTGA < 41bp 0.821836095161004 0.615039143072399 0.61818534 0.22672305 prediction 0.413593904177209 Functional Loss - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24166129 chr16:24166132 nonsynonymous SNV 0.900 1 24 hm5C_associated_SNPs_92651 0 0 7 DDX24 POSTAR2 ENCODE chr16:24166040-24166179
64251 chr18 3452135 3452135 1 + C T rs114378990 3452133 + 3452113 3452153 41 TTTCTGGCGTCCCCCCGACTCTCCCGCGGCACTTTGGCCTA TTTCTGGCGTCCCCCCGACTCTTCCGCGGCACTTTGGCCTA < 41bp 0.706796535813621 0.460936893286918 0.6009466 0.21389928 prediction 0.413593071627242 Functional Loss - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3452133 chr18:3452135 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_92652 0 0 6 IGF2BP2 POSTAR2 ENCODE chr18:3452135-3452252
64251 chr19 57839964 57839964 1 + G T LUAD 57839961 + 57839941 57839981 41 GAGTGTGGAAAAGCTTTTTGCGAGAGTGCAGACCTCATTCA GAGTGTGGAAAAGCTTTTTGCGATAGTGCAGACCTCATTCA < 41bp 0.938887294717043 0.732092925782742 0.8752965 0.06381312 prediction 0.413588737868602 Functional Loss - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57839961 chr19:57839964 nonsynonymous SNV 0.156 0 24 hm5C_associated_SNPs_92653 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr19:57839951-57839974
64251 chr16 2011675 2011675 1 + C T rs201026820 2011673 + 2011653 2011693 41 ACCCCCAACCCCCCACCATCCTCCTGAGGCCTGGGGGCCAG ACCCCCAACCCCCCACCATCCTTCTGAGGCCTGGGGGCCAG < 41bp 0.842198879870811 0.635406200313549 0.19664401 0.14109233 prediction 0.413585359114524 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011673 chr16:2011675 synonymous SNV . 0 23 hm5C_associated_SNPs_92654 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2011659-2011701
64251 chr7 134346378 134346378 1 + A T LUAD 134346374 + 134346354 134346394 41 GCGAAGGAATGGAGGAAGCTCGGAACTGTGGGAAGCAACTC GCGAAGGAATGGAGGAAGCTCGGATCTGTGGGAAGCAACTC < 41bp 0.903808566730109 0.697025170085467 0.84554064 0.86924136 prediction 0.413566793289283 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346374 chr7:134346378 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_92661 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:134346357-134346389
64251 chr20 49575816 49575816 1 + G T KIRC 49575812 + 49575792 49575832 41 CCTTTTCGGCCGCCGCCTCGCTGCGCCGCCTCAATTCGGCA CCTTTTCGGCCGCCGCCTCGCTGCTCCGCCTCAATTCGGCA < 41bp 0.740014770261946 0.533235661119169 0.09961128 0.07600051 prediction 0.413558218285554 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575812 chr20:49575816 nonsynonymous SNV 0.948 0 25 hm5C_associated_SNPs_92662 0 0 1 FMR1 POSTAR2 ENCODE chr20:49575797-49575884
64251 chr19 15807799 15807799 1 + A T LUSC 15807797 + 15807777 15807817 41 TGCTGCACTTCCGGTTCCTGCCAGACCACACTGAGCCCCGC TGCTGCACTTCCGGTTCCTGCCTGACCACACTGAGCCCCGC < 41bp 0.71371315262558 0.506934777838995 0.20456946 0.032710373 prediction 0.413556749573171 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807797 chr19:15807799 synonymous SNV . 0 23 hm5C_associated_SNPs_92664 0 0 2 GRWD1 POSTAR2 ENCODE chr19:15807774-15807815
64251 chrX 70824043 70824043 1 + G T LUAD 70824040 + 70824020 70824060 41 GCAGTGATGATTCGGAAGCTCCCGACGACAAGAGTGATGAT GCAGTGATGATTCGGAAGCTCCCTACGACAAGAGTGATGAT < 41bp 0.706778281511423 0.305949119291379 0.4540969 0.16308787 prediction 0.413556563022845 Functional Loss - GCNA ENSG00000147174 CDS Human protein_coding chrX:70824040 chrX:70824043 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_92665 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:70824036-70824060
64251 chr19 56204083 56204083 1 + C T UCEC 56204080 + 56204060 56204100 41 CCGGTCAGTGGGCCCTCAGCCTCCGATCCCTGGACACCGGC CCGGTCAGTGGGCCCTCAGCCTCTGATCCCTGGACACCGGC < 41bp 0.747890660681387 0.541116826236573 0.6558762 0.27259254 prediction 0.413547668889628 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56204080 chr19:56204083 synonymous SNV . 0 24 hm5C_associated_SNPs_92669 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:56204074-56204113
64251 chr1 22835692 22835692 1 + C T LUSC 22835690 + 22835670 22835710 41 ATTGAGTACAAGCTCTTTACCTCGGAGGAGGAGCACCTGGC ATTGAGTACAAGCTCTTTACCTTGGAGGAGGAGCACCTGGC < 41bp 0.706772155631572 0.419734259272835 0.013471335 0.019098967 prediction 0.413544311263144 Functional Loss - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22835690 chr1:22835692 nonsynonymous SNV 0.039 1 23 hm5C_associated_SNPs_92670 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:22835680-22835700
64251 chr20 42089621 42089621 1 + C T SKCM 42089618 + 42089598 42089638 41 AAAGGCCCGTTCTGTGTCCCCTCCACCAAAAAGAGCTACTT AAAGGCCCGTTCTGTGTCCCCTCTACCAAAAAGAGCTACTT < 41bp 0.782669674142704 0.575902871916816 0.9097536 0.46400708 prediction 0.413533604451776 Functional Loss - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089618 chr20:42089621 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_92677 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:42089513-42089664
64251 chr1 100964519 100964519 1 + G A SKCM 100964516 + 100964496 100964536 41 ACTCCCGGCTAGCCAGTTCTCTAGGGAACTTGAATGCTGCA ACTCCCGGCTAGCCAGTTCTCTAAGGAACTTGAATGCTGCA < 41bp 0.765952934082434 0.559192511124622 0.8270437 0.5486476 prediction 0.413520845915624 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964516 chr1:100964519 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_92683 0 0 3 U2AF2 POSTAR2 ENCODE chr1:100964452-100964534
64251 chr1 146766109 146766109 1 + G A STAD 146766106 + 146766086 146766126 41 AATAGCAAGTGTTCATCTTCCACGTATTGGACATGCCACGA AATAGCAAGTGTTCATCTTCCACATATTGGACATGCCACGA < 41bp 0.706758878859003 0.480594635163106 0.09241918 0.09412974 prediction 0.413517757718005 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146766106 chr1:146766109 nonsynonymous SNV 0.987 4 24 hm5C_associated_SNPs_92686 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:146766096-146766121
64251 chr20 48600418 48600418 1 + C T LUSC 48600415 + 48600395 48600435 41 CCTGCTGGCAGCCATCCCACCTCCGGAGATCCTCAACCCCA CCTGCTGGCAGCCATCCCACCTCTGGAGATCCTCAACCCCA < 41bp 0.749867767505529 0.543111936408217 0.5385877 0.1858589 prediction 0.413511662194623 Functional Loss - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600415 chr20:48600418 nonsynonymous SNV 0.960 3 24 hm5C_associated_SNPs_92691 0 0 2 BUD13 POSTAR2 ENCODE chr20:48600311-48600450
64251 chr7 98256519 98256519 1 + C T HNSC 98256516 + 98256496 98256536 41 TTGTCAGTGACGGCAAGTGGCACCACATCTGTGTCACCTGG TTGTCAGTGACGGCAAGTGGCACTACATCTGTGTCACCTGG < 41bp 0.706755580588702 0.489455564704231 0.03658101 0.08716333 prediction 0.413511161177404 Functional Loss - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98256516 chr7:98256519 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_92692 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98256504-98256536
64251 chr16 3189016 3189016 1 + G C BLCA 3189015 + 3188995 3189035 41 ACATCCCATTCTATTTCTCCCGGGAAGAATGGGGCACCCTG ACATCCCATTCTATTTCTCCCCGGAAGAATGGGGCACCCTG < 41bp 0.890203223174109 0.683451156746928 0.89111406 0.33272994 prediction 0.413504132854362 Functional Loss - ZNF213 ENSG00000085644 CDS Human protein_coding chr16:3189015 chr16:3189016 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_92693 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:3188994-3189016
64251 chr19 44739950 44739950 1 + G T SARC 44739946 + 44739926 44739966 41 ATTCACCATTAATATGCCATCGGAGAGTCCACACAGGAGAG ATTCACCATTAATATGCCATCGGATAGTCCACACAGGAGAG < 41bp 0.715908765788011 0.509157479646655 0.4677381 0.17332655 prediction 0.413502572282712 Functional Loss - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739946 chr19:44739950 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_92697 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44739896-44739961
64251 chr11 43351532 43351532 1 + G T LUSC 43351529 + 43351509 43351549 41 ATTTAGGCTGCAGTACTTTGCACGGGGCCTGCAAGTTTATA ATTTAGGCTGCAGTACTTTGCACTGGGCCTGCAAGTTTATA < 41bp 0.706750722382292 0.324468714811392 0.44480786 0.062458277 prediction 0.413501444764584 Functional Loss - API5 ENSG00000166181 CDS Human protein_coding chr11:43351529 chr11:43351532 nonsynonymous SNV 0.889 4 24 hm5C_associated_SNPs_92698 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:43351511-43351551
64251 chr11 43351531 43351531 1 + C T PAAD 43351529 + 43351509 43351549 41 ATTTAGGCTGCAGTACTTTGCACGGGGCCTGCAAGTTTATA ATTTAGGCTGCAGTACTTTGCATGGGGCCTGCAAGTTTATA < 41bp 0.706750722382292 0.429300738900864 0.44480786 0.3101949 prediction 0.413501444764584 Functional Loss - API5 ENSG00000166181 CDS Human protein_coding chr11:43351529 chr11:43351531 nonsynonymous SNV 0.904 4 23 hm5C_associated_SNPs_92699 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:43351511-43351551
64251 chr14 23075345 23075345 1 + C T CESC 23075342 + 23075322 23075362 41 TCCCAGGGCCTGGTCTGGTGCAGCGATTCCGGCCGGACTTC TCCCAGGGCCTGGTCTGGTGCAGTGATTCCGGCCGGACTTC < 41bp 0.726982196447202 0.520231642052243 0.38435456 0.45878762 prediction 0.413501108789919 Functional Loss - ABHD4 ENSG00000100439 CDS Human protein_coding chr14:23075342 chr14:23075345 stopgain 0.999 1 24 hm5C_associated_SNPs_92700 0 0 2 PPIG POSTAR2 ENCODE chr14:23075315-23075393
64251 chr11 124857973 124857973 1 + C T HNSC 124857970 + 124857950 124857990 41 CCCAGAGACCTGCATGTTCTCTCCAACGACCAGAATATTCT CCCAGAGACCTGCATGTTCTCTCTAACGACCAGAATATTCT < 41bp 0.777534128126006 0.57078779316084 0.95872307 0.9225551 prediction 0.413492669930331 Functional Loss - CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124857970 chr11:124857973 synonymous SNV . 0 24 hm5C_associated_SNPs_92702 0 0 1 RBM15 POSTAR2 ENCODE chr11:124857935-124857994
64251 chr13 53042436 53042436 1 + G A COAD 53042433 + 53042413 53042453 41 CCTATTGAAGAGATGCGACACACGATTGTAGATATTCTAAC CCTATTGAAGAGATGCGACACACAATTGTAGATATTCTAAC < 41bp 0.756204610135922 0.549460114283286 0.016058177 0.014737666 prediction 0.413488991705272 Functional Loss - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53042433 chr13:53042436 synonymous SNV . 0 24 hm5C_associated_SNPs_92703 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr13:53042407-53042457
64251 chr19 36124095 36124095 1 + C T UCEC 36124093 + 36124073 36124113 41 TGGACCACCCATGATGCTGCCACCAATGGCTCGGGCTCCAG TGGACCACCCATGATGCTGCCATCAATGGCTCGGGCTCCAG < 41bp 0.864864063285439 0.658125214163282 0.22430497 0.11762282 prediction 0.413477698244315 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124093 chr19:36124095 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_92707 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:36124080-36124100
64251 chr6 13977656 13977656 1 + A T STAD 13977654 + 13977634 13977674 41 GCAAAGGGAAGAAGTGCCTGCCAGAGAACCCTACTGAGCTG GCAAAGGGAAGAAGTGCCTGCCTGAGAACCCTACTGAGCTG < 41bp 0.753179666185701 0.546442617606747 0.8737478 0.34527296 prediction 0.413474097157909 Functional Loss - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977654 chr6:13977656 synonymous SNV . 0 23 hm5C_associated_SNPs_92709 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr6:13977640-13977660
64251 chr11 72554311 72554311 1 - C T UCEC 72554314 - 72554294 72554334 41 AAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCAT AAGTACCTACAGTTTCCCACCTCAAACAGCCTCCTGAGCAT < 41bp 0.806507628518155 0.599772322659811 0.34921104 0.058886617 prediction 0.413470611716689 Functional Loss - FCHSD2 ENSG00000137478 CDS Human protein_coding chr11:72554314 chr11:72554311 synonymous SNV . 0 24 hm5C_associated_SNPs_92712 0 0 1 GRWD1 POSTAR2 ENCODE chr11:72554248-72554331
64251 chr19 58906057 58906057 1 + G A CESC 58906054 + 58906034 58906074 41 TGTGTCTCCTTGCAGGGCTCCTCGAACTCCTATGCCATTAA TGTGTCTCCTTGCAGGGCTCCTCAAACTCCTATGCCATTAA < 41bp 0.800699655392938 0.593965906307835 0.8846183 0.90778977 prediction 0.413467498170206 Functional Loss - RPS5 ENSG00000083845 CDS Human protein_coding chr19:58906054 chr19:58906057 synonymous SNV . 0 24 hm5C_associated_SNPs_92714 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:58906040-58906140
64251 chr17 76167977 76167977 1 + C T UCEC 76167975 + 76167955 76167995 41 CAGCCACCCTTCACCCAGAACGCGGAGACCACCGAGGGCTA CAGCCACCCTTCACCCAGAACGTGGAGACCACCGAGGGCTA < 41bp 0.832773690834142 0.626044868470435 0.7262408 0.30838758 prediction 0.413457644727413 Functional Loss - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167975 chr17:76167977 nonsynonymous SNV 0.024 0 23 hm5C_associated_SNPs_92720 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76167936-76167981
64251 chr19 54651887 54651887 1 + C T TGCT 54651884 + 54651864 54651904 41 TGCTCTCTCCCACCCGCAGTCTCCAGCCAAAAACGGCTCCA TGCTCTCTCCCACCCGCAGTCTCTAGCCAAAAACGGCTCCA < 41bp 0.784235454536165 0.577508087564403 0.9367179 0.45412636 prediction 0.413454733943524 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54651884 chr19:54651887 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_92722 0 0 4 GRWD1 POSTAR2 ENCODE chr19:54651884-54651927
64251 chr6 71123380 71123380 1 + G T rs372906765 71123378 + 71123358 71123398 41 GAGCTCCTCCGTTCGACAGGCGGGGGAAGAGGCCGAGCCGG GAGCTCCTCCGTTCGACAGGCGTGGGAAGAGGCCGAGCCGG < 41bp 0.908957319044761 0.702231853733166 0.93254423 0.88013834 prediction 0.413450930623192 Functional Loss - FAM135A ENSG00000224349 ncRNA_intronic Human antisense chr6:71123378 chr6:71123380 . . 0 23 hm5C_associated_SNPs_92724 0 0 5 DDX24 POSTAR2 ENCODE chr6:71123345-71123408
64251 chr6 96997310 96997310 1 + G A UCEC 96997307 + 96997287 96997327 41 GACCTCTTAATAAAACTTATCTCGAGGTGGTACGTTCAGTA GACCTCTTAATAAAACTTATCTCAAGGTGGTACGTTCAGTA < 41bp 0.736713285565728 0.529994098997657 0.23738316 0.12397185 prediction 0.413438373136142 Functional Loss - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96997307 chr6:96997310 nonsynonymous SNV 0.895 1 24 hm5C_associated_SNPs_92729 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:96997307-96997367
64251 chr12 122079120 122079120 1 + G A STAD 122079117 + 122079097 122079137 41 AGCAACGTGCACAATCTCAACTCGGTCAAGGAGTCCCCCCA AGCAACGTGCACAATCTCAACTCAGTCAAGGAGTCCCCCCA < 41bp 0.80071119764817 0.593996169173407 0.20945227 0.1007396 prediction 0.413430056949525 Functional Loss - ORAI1 ENSG00000182500 CDS Human other chr12:122079117 chr12:122079120 synonymous SNV . 0 24 hm5C_associated_SNPs_92731 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:122079094-122079120
64251 chr19 3204128 3204128 1 + C T UCEC 3204125 + 3204105 3204145 41 GCACCCTGCAGCACGCCTTCCTGCGGGAGCTGGAGACGGTG GCACCCTGCAGCACGCCTTCCTGTGGGAGCTGGAGACGGTG < 41bp 0.706713054942586 0.49478475993804 0.23620144 0.15499935 prediction 0.413426109885172 Functional Loss - NCLN ENSG00000125912 CDS Human protein_coding chr19:3204125 chr19:3204128 nonsynonymous SNV 0.827 3 24 hm5C_associated_SNPs_92734 0 0 3 NOL12 POSTAR2 ENCODE chr19:3204085-3204138
64251 chr6 155577662 155577662 1 - G A READ 155577664 - 155577644 155577684 41 TTGCCAGTCTCACCGGTCCACTCGTTGCTGGAGGAATTCTT TTGCCAGTCTCACCGGTCCACTTGTTGCTGGAGGAATTCTT < 41bp 0.706710635048547 0.458761965261614 0.05946496 0.08527085 prediction 0.413421270097094 Functional Loss - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577664 chr6:155577662 nonsynonymous SNV 0.588 1 23 hm5C_associated_SNPs_92736 0 0 1 SRSF9 POSTAR2 ENCODE chr6:155577597-155577672
64251 chr19 19308039 19308039 1 + C T LUSC 19308036 + 19308016 19308056 41 CAGCACAGGGGGAGCTGGACCAGCTGAAGGAGCATTTGCGG CAGCACAGGGGGAGCTGGACCAGTTGAAGGAGCATTTGCGG < 41bp 0.718731343809174 0.512022818940103 0.83553755 0.7971159 prediction 0.413417049738142 Functional Loss - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308036 chr19:19308039 synonymous SNV . 0 24 hm5C_associated_SNPs_92738 0 0 2 PPIG POSTAR2 ENCODE chr19:19307981-19308060
64251 chr19 44351828 44351828 1 + G A UCEC 44351825 + 44351805 44351845 41 AATGTGGGAAGGCCTTCAGTCGTGGCTATCAGCTTACTCAG AATGTGGGAAGGCCTTCAGTCGTAGCTATCAGCTTACTCAG < 41bp 0.706706727127794 0.4519807218568 0.8911001 0.73605585 prediction 0.413413454255589 Functional Loss - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44351825 chr19:44351828 nonsynonymous SNV 0.688 0 24 hm5C_associated_SNPs_92741 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44351805-44351829
64251 chr7 90895353 90895353 1 + C T LUSC 90895350 + 90895330 90895370 41 GTGGTGTGTAATGACAAGTTCGCCGAGGACGGGGCACGCAC GTGGTGTGTAATGACAAGTTCGCTGAGGACGGGGCACGCAC < 41bp 0.736431987606174 0.529726341478981 0.27959496 0.26450437 prediction 0.413411292254386 Functional Loss - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895350 chr7:90895353 synonymous SNV . 0 24 hm5C_associated_SNPs_92743 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:90895347-90895370
64251 chr10 104622654 104622654 1 + G T UCEC 104622652 + 104622632 104622672 41 TTGAACAGTCATCGGATCTACAGGACCAGTTGAATCATCTG TTGAACAGTCATCGGATCTACATGACCAGTTGAATCATCTG < 41bp 0.706702563386313 0.455424720927331 0.08265811 0.023360968 prediction 0.413405126772625 Functional Loss - BORCS7 ENSG00000166275;ENSG00000270316 CDS Human other chr10:104622652 chr10:104622654 nonsynonymous SNV 0.959 0 23 hm5C_associated_SNPs_92748 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:104622652-104622717
64251 chr19 57802264 57802264 1 + C T SKCM 57802261 + 57802241 57802281 41 CAGACCCACAGAGTGAGAAACTCCATGGGAAAATGAGCCTT CAGACCCACAGAGTGAGAAACTCTATGGGAAAATGAGCCTT < 41bp 0.766983607157856 0.56028144751543 0.9737151 0.9484881 prediction 0.413404319284853 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802261 chr19:57802264 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_92749 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:57802195-57802308
64251 chr12 65564620 65564620 1 + C T COAD 65564617 + 65564597 65564637 41 TAACAGTCTCCCTCCCAGTGCGGCGGTGGCCGCCTCTAGTT TAACAGTCTCCCTCCCAGTGCGGTGGTGGCCGCCTCTAGTT < 41bp 0.71698596432913 0.510286330531718 0.3547954 0.24799183 prediction 0.413399267594823 Functional Loss - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564617 chr12:65564620 nonsynonymous SNV 0.035 0 24 hm5C_associated_SNPs_92752 0 0 5 BUD13 POSTAR2 ENCODE chr12:65564574-65564671
64251 chr17 18145901 18145901 1 + G A UCEC 18145898 + 18145878 18145918 41 AGTGCTGACACCACGCTGGACACGACAGGGGACGTCACAGT AGTGCTGACACCACGCTGGACACAACAGGGGACGTCACAGT < 41bp 0.706697664444478 0.464812342778328 0.06262949 0.03735259 prediction 0.413395328888956 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18145898 chr17:18145901 synonymous SNV . 0 24 hm5C_associated_SNPs_92754 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:18145876-18145912
64251 chr6 168352575 168352575 1 + C T SKCM 168352573 + 168352553 168352593 41 GTCAGCAAAGAGGAGCTTTCCTCGGGGGACAGTCTGTCCCC GTCAGCAAAGAGGAGCTTTCCTTGGGGGACAGTCTGTCCCC < 41bp 0.860100942678337 0.653405737514631 0.5717615 0.14972845 prediction 0.413390410327412 Functional Loss - AFDN ENSG00000130396 CDS Human protein_coding chr6:168352573 chr6:168352575 nonsynonymous SNV 0.272 2 23 hm5C_associated_SNPs_92758 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:168352531-168352580
64251 chr19 11113809 11113809 1 + G T KIRC 11113807 + 11113787 11113827 41 ATGCCCCCAAAGCCGGGCAGCTGGAGGCCTGGCTCGAGATG ATGCCCCCAAAGCCGGGCAGCTTGAGGCCTGGCTCGAGATG < 41bp 0.706695129894348 0.360190719940618 0.8625112 0.5299858 prediction 0.413390259788696 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11113807 chr19:11113809 synonymous SNV . 0 23 hm5C_associated_SNPs_92759 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11113798-11113833
64251 chr22 21140297 21140297 1 + G A KIRP 21140294 + 21140274 21140314 41 CTTTCCTTTTCTGTCTAGAACTCGAGAAGTGCTTCTGCCGA CTTTCCTTTTCTGTCTAGAACTCAAGAAGTGCTTCTGCCGA < 41bp 0.796524111224104 0.58982973340385 0.38131902 0.11473033 prediction 0.413388755640508 Functional Loss - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21140294 chr22:21140297 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_92760 0 0 1 BUD13 POSTAR2 ENCODE chr22:21140289-21140321
64251 chrX 48672945 48672945 1 + G T UCEC 48672941 + 48672921 48672961 41 CCACAGGTTTCGGCCAAGGCCAAGGATATACCATCAATGTG CCACAGGTTTCGGCCAAGGCCAAGTATATACCATCAATGTG < 41bp 0.711194595767715 0.504500995584528 0.117655545 0.08965841 prediction 0.413387200366374 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48672941 chrX:48672945 nonsynonymous SNV 0.909 4 25 hm5C_associated_SNPs_92761 0 0 5 DDX24 POSTAR2 ENCODE chrX:48672848-48672945
64251 chr2 176982111 176982111 1 + G A SKCM 176982108 + 176982088 176982128 41 TCATGCTCCAGCTCAACCCTCGTGGCGCGGCCAAGCCGCAG TCATGCTCCAGCTCAACCCTCGTAGCGCGGCCAAGCCGCAG < 41bp 0.706693308708648 0.458855661667346 0.8266703 0.56700814 prediction 0.413386617417296 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982108 chr2:176982111 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_92762 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176982080-176982120
64251 chr17 42231990 42231990 1 + C T COAD 42231988 + 42231968 42232008 41 GGTGATGATCAAGTCCCTGACTCGGAGCACAATGGACGCCA GGTGATGATCAAGTCCCTGACTTGGAGCACAATGGACGCCA < 41bp 0.870073678486415 0.663381248371079 0.12052819 0.098783344 prediction 0.413384860230671 Functional Loss - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42231988 chr17:42231990 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_92763 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:42231969-42231995
64251 chr1 1562801 1562801 1 + G A PRAD 1562798 + 1562778 1562818 41 CTGCCGGACGACGAGGGCAACACGGCACTGCACTACGCGGC CTGCCGGACGACGAGGGCAACACAGCACTGCACTACGCGGC < 41bp 0.791663697286492 0.584973099386635 0.70561284 0.36462468 prediction 0.413381195799714 Functional Loss - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1562798 chr1:1562801 synonymous SNV . 0 24 hm5C_associated_SNPs_92766 0 0 1 PPIG POSTAR2 ENCODE chr1:1562772-1562808
64251 chr8 21905756 21905756 1 + C T COAD 21905754 + 21905734 21905774 41 ACACGGCGGCCCCAGCCCCTCACGTAGTCTGGGAGGCAGGG ACACGGCGGCCCCAGCCCCTCATGTAGTCTGGGAGGCAGGG < 41bp 0.799260422987734 0.592571125617856 0.32192564 0.22440583 prediction 0.413378594739757 Functional Loss - FGF17 ENSG00000158815 CDS Human protein_coding chr8:21905754 chr8:21905756 nonsynonymous SNV 0.990 3 23 hm5C_associated_SNPs_92767 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:21905753-21905774
64251 chr17 40173651 40173651 1 + C T CESC 40173648 + 40173628 40173668 41 CCAGGCGTCTGTGGGCAAAACTTCAATCCTGGAGCAGCTTC CCAGGCGTCTGTGGGCAAAACTTTAATCCTGGAGCAGCTTC < 41bp 0.786382727335543 0.579693826549353 0.52213085 0.240424 prediction 0.413377801572379 Functional Loss - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40173648 chr17:40173651 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_92768 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:40173634-40173658
64251 chr9 131847815 131847815 1 + C T UCEC 131847812 + 131847792 131847832 41 CGCAGAATGCACCAAACAAACAACGCCAGGTTCCTGGACTT CGCAGAATGCACCAAACAAACAATGCCAGGTTCCTGGACTT < 41bp 0.730081278263172 0.523395687254166 0.4081485 0.44391286 prediction 0.413371182018011 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131847812 chr9:131847815 synonymous SNV . 0 24 hm5C_associated_SNPs_92773 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:131847800-131847828
64251 chr1 2518276 2518276 1 + G C rs375228916 2518275 + 2518255 2518295 41 CAGGAGCGAGGAGCCGGGAGCGGGGAACAGGGAGTCGGGGA CAGGAGCGAGGAGCCGGGAGCCGGGAACAGGGAGTCGGGGA < 41bp 0.853024034808818 0.646340519570872 0.92475337 0.91742194 prediction 0.413367030475891 Functional Loss - FAM213B ENSG00000157870 CDS Human protein_coding chr1:2518275 chr1:2518276 synonymous SNV . 0 22 hm5C_associated_SNPs_92774 0 0 4 DDX55 POSTAR2 ENCODE chr1:2518247-2518336
64251 chr11 65113812 65113812 1 + C T COAD 65113809 + 65113789 65113829 41 GAGTGCAAATGTTGCAATATCTGCGGCACCTCCGAGAATGA GAGTGCAAATGTTGCAATATCTGTGGCACCTCCGAGAATGA < 41bp 0.740950726673516 0.534269493810724 0.16675553 0.1687398 prediction 0.413362465725585 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65113809 chr11:65113812 synonymous SNV . 0 24 hm5C_associated_SNPs_92776 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:65113788-65113822
64251 chr20 35835747 35835747 1 + C T UCEC 35835744 + 35835724 35835764 41 GAGTCCCTCTCCGAAGCCTTCAGCGTGGCCTCTGCAGCTGC GAGTCCCTCTCCGAAGCCTTCAGTGTGGCCTCTGCAGCTGC < 41bp 0.755571294074381 0.548898160558362 0.3124088 0.14669296 prediction 0.413346267032039 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35835744 chr20:35835747 synonymous SNV . 0 24 hm5C_associated_SNPs_92782 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:35835715-35835747
64251 chr6 121768112 121768112 1 + C T CESC 121768109 + 121768089 121768129 41 CCGAATCCTGCTGCTGGGGACAGCGGTTGAGTCAGCCTGGG CCGAATCCTGCTGCTGGGGACAGTGGTTGAGTCAGCCTGGG < 41bp 0.748588234271907 0.541922572271996 0.60405755 0.42321885 prediction 0.413331323999821 Functional Loss - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768109 chr6:121768112 nonsynonymous SNV 0.678 5 24 hm5C_associated_SNPs_92787 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:121768090-121768123
64251 chr16 57238750 57238750 1 + G T UCEC 57238748 + 57238728 57238768 41 ATGACAGTGTTGACACCCAACAGCAACAGGCCGAGAACAGT ATGACAGTGTTGACACCCAACATCAACAGGCCGAGAACAGT < 41bp 0.706665124161944 0.377350215933634 0.15693101 0.013091296 prediction 0.413330248323889 Functional Loss - RSPRY1 ENSG00000159579 CDS Human protein_coding chr16:57238748 chr16:57238750 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_92788 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:57238733-57238766
64251 chr3 9965687 9965687 1 + C T SKCM 9965684 + 9965664 9965704 41 AGGTCCAGGGCCCCCCAAAACCCCGGTGGCACAAAAACCTG AGGTCCAGGGCCCCCCAAAACCCTGGTGGCACAAAAACCTG < 41bp 0.714001476701586 0.507337278823527 0.45020238 0.4254009 prediction 0.413328395756117 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9965684 chr3:9965687 nonsynonymous SNV 0.285 0 24 hm5C_associated_SNPs_92789 0 0 1 DDX55 POSTAR2 ENCODE chr3:9965640-9965755
64251 chr16 2284933 2284933 1 + G A COAD 2284930 + 2284910 2284950 41 GCGGCAGCCACCACCGTCCTCACGGAAGACCCGCACACAGT GCGGCAGCCACCACCGTCCTCACAGAAGACCCGCACACAGT < 41bp 0.706663794913149 0.456895260540384 0.6375561 0.27463526 prediction 0.413327589826298 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284930 chr16:2284933 synonymous SNV . 0 24 hm5C_associated_SNPs_92791 0 0 4 PRPF8 POSTAR2 ENCODE chr16:2284846-2284936
64251 chr15 67984850 67984850 1 + G A UCEC 67984847 + 67984827 67984867 41 CTCCAATATGCTAGTAAACACAAGAGGACAGGTTAAGCTGT CTCCAATATGCTAGTAAACACAAAAGGACAGGTTAAGCTGT < 41bp 0.706661959179319 0.46309810311282 0.2616833 0.107702225 prediction 0.413323918358639 Functional Loss - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:67984847 chr15:67984850 nonsynonymous SNV 0.952 1 24 hm5C_associated_SNPs_92793 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr15:67984845-67984871
64251 chr17 41061424 41061424 1 + G A SKCM 41061421 + 41061401 41061441 41 TTTTCCTCATCAAGTTGTTGCTGGAGTCCTGTCAGGTATGG TTTTCCTCATCAAGTTGTTGCTGAAGTCCTGTCAGGTATGG < 41bp 0.818094117448929 0.611438769293856 0.161437 0.06863621 prediction 0.413310696310146 Functional Loss - G6PC ENSG00000131482 CDS Human protein_coding chr17:41061421 chr17:41061424 stopgain 0.670 3 24 hm5C_associated_SNPs_92795 1 0 1 SND1 POSTAR2 ENCODE chr17:41061419-41061434
64251 chr11 74914392 74914392 1 + C T rs139696725 74914389 + 74914369 74914409 41 GTGATCCACGGCAGCGCCATCGACACCACCTGTGTGCACTG GTGATCCACGGCAGCGCCATCGATACCACCTGTGTGCACTG < 41bp 0.753346718977233 0.546691468954657 0.18248469 0.25075173 prediction 0.413310500045152 Functional Loss - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74914389 chr11:74914392 synonymous SNV . 0 24 hm5C_associated_SNPs_92796 0 0 2 SND1 POSTAR2 ENCODE chr11:74914389-74914442
64251 chr12 1896779 1896779 1 + G A rs2286382 1896776 + 1896756 1896796 41 GGTGAACCACCAAAATAGTGCTCGAGTCTTAGGTTACTGTC GGTGAACCACCAAAATAGTGCTCAAGTCTTAGGTTACTGTC < 41bp 0.780207122560477 0.573555808303134 0.14256561 0.11907473 prediction 0.413302628514687 Functional Loss - ADIPOR2 ENSG00000006831 UTR3 Human protein_coding chr12:1896776 chr12:1896779 . . 0 24 hm5C_associated_SNPs_92802 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:1896731-1896799
64251 chr1 227169809 227169809 1 + G C LUAD 227169808 + 227169788 227169828 41 TGCGCACGCTCTGCAAGGTGCGTGGTGCGGCACTCAAGCTG TGCGCACGCTCTGCAAGGTGCCTGGTGCGGCACTCAAGCTG < 41bp 0.70664490185879 0.374555386500568 0.42498496 0.2648502 prediction 0.41328980371758 Functional Loss - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227169808 chr1:227169809 nonsynonymous SNV 0.926 4 22 hm5C_associated_SNPs_92807 0 0 3 BUD13 POSTAR2 ENCODE chr1:227169717-227169823
64251 chr3 45715900 45715900 1 + C T UCEC 45715897 + 45715877 45715917 41 TACCACGTGGAGTGTTACCACTGCGAGGTAGACCCCTCCCC TACCACGTGGAGTGTTACCACTGTGAGGTAGACCCCTCCCC < 41bp 0.753347900078287 0.546703723942523 0.19161344 0.23535213 prediction 0.413288352271528 Functional Loss - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45715897 chr3:45715900 synonymous SNV . 0 24 hm5C_associated_SNPs_92808 0 0 6 BUD13 POSTAR2 ENCODE chr3:45715814-45715916
64251 chr1 26881118 26881118 1 + C T rs141051128 26881116 + 26881096 26881136 41 TGAGCAAAGAGGCCATTGACCACGAGAAGAAGGCCTATTCT TGAGCAAAGAGGCCATTGACCATGAGAAGAAGGCCTATTCT < 41bp 0.867045702305259 0.660403620494046 0.22929019 0.18011856 prediction 0.413284163622426 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26881116 chr1:26881118 synonymous SNV . 0 23 hm5C_associated_SNPs_92809 0 0 1 FMR1 POSTAR2 ENCODE chr1:26881112-26881185
64251 chr1 233807174 233807174 1 + G A rs147325030 233807171 + 233807151 233807191 41 CATGACCAACTGTCCTTCTCCTCGATCACAGACCAGGCAGC CATGACCAACTGTCCTTCTCCTCAATCACAGACCAGGCAGC < 41bp 0.800298472871169 0.593661863450972 0.26373115 0.08574149 prediction 0.413273218840394 Functional Loss - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233807171 chr1:233807174 synonymous SNV . 0 24 hm5C_associated_SNPs_92811 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:233807144-233807179
64251 chr11 82877339 82877339 1 + A C rs577705098 82877338 + 82877318 82877358 41 TAACAGAAGAGTCAGAAAAACAGGGGACAAAACCAGGGAGA TAACAGAAGAGTCAGAAAAACCGGGGACAAAACCAGGGAGA < 41bp 0.844775953140749 0.638142680467152 0.92339754 0.9184612 prediction 0.413266545347195 Functional Loss - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82877338 chr11:82877339 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_92815 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:82877307-82877339
64251 chr11 70194467 70194467 1 + C T SKCM 70194465 + 70194445 70194485 41 TCCGGGCAGTGGGCGCTCCACCCCACGAAGGATCCCTCACA TCCGGGCAGTGGGCGCTCCACCTCACGAAGGATCCCTCACA < 41bp 0.706628190036825 0.421583752159393 0.042635858 0.036753744 prediction 0.41325638007365 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70194465 chr11:70194467 nonsynonymous SNV 0.866 4 23 hm5C_associated_SNPs_92818 0 0 3 FXR2 POSTAR2 ENCODE chr11:70194392-70194521
64251 chr19 43858432 43858432 1 + C T COAD 43858430 + 43858410 43858450 41 AGGAGCCCCGCGTCACTGAGCACCGGATGGGCCCCGGCCTC AGGAGCCCCGCGTCACTGAGCATCGGATGGGCCCCGGCCTC < 41bp 0.836344728044141 0.629724276886847 0.28281844 0.21870598 prediction 0.413240902314587 Functional Loss - CD177 ENSG00000204936 CDS Human protein_coding chr19:43858430 chr19:43858432 synonymous SNV . 0 23 hm5C_associated_SNPs_92827 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:43858420-43858440
64251 chr9 35606933 35606933 1 + C T STAD 35606930 + 35606910 35606950 41 CCCTGGACATTGCCCGAGGCCTGCGGTACCTGCACTCCAAA CCCTGGACATTGCCCGAGGCCTGTGGTACCTGCACTCCAAA < 41bp 0.73744980876202 0.530831596975125 0.84499454 0.61620134 prediction 0.41323642357379 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35606930 chr9:35606933 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_92830 0 0 1 AARS POSTAR2 ENCODE chr9:35606922-35606967
64251 chr16 31050905 31050905 1 + C T KIRP 31050902 + 31050882 31050922 41 TGAGAAGAACATCCTGAGCTCAGCGGACTACGTGGAACGTG TGAGAAGAACATCCTGAGCTCAGTGGACTACGTGGAACGTG < 41bp 0.706618191455742 0.48900962980443 0.8862777 0.7491661 prediction 0.413236382911484 Functional Loss - STX4 ENSG00000103496 CDS Human protein_coding chr16:31050902 chr16:31050905 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_92831 0 0 6 DDX55 POSTAR2 ENCODE chr16:31050887-31050950
64251 chr15 41191514 41191514 1 + A T LUAD 41191512 + 41191492 41191532 41 CCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCA CCATCCTGGTCGGGACTGCCCATGGCCACATCTTTGAAGCA < 41bp 0.732538870183897 0.525921357632307 0.88241065 0.54124635 prediction 0.41323502510318 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191512 chr15:41191514 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_92832 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr15:41191500-41191527
64251 chr11 65123701 65123701 1 + T C LUAD 65123700 + 65123680 65123720 41 GCTTTGGGGCCCGCCATGTTCTTGCGCCTTCATTCCCCCCT GCTTTGGGGCCCGCCATGTTCCTGCGCCTTCATTCCCCCCT < 41bp 0.773318586688444 0.566703590865415 0.4140575 0.30219132 prediction 0.413229991646056 Functional Loss - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123700 chr11:65123701 nonsynonymous SNV 0.032 0 22 hm5C_associated_SNPs_92836 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:65123700-65123701
64251 chrX 129146937 129146937 1 + G A UCEC 129146934 + 129146914 129146954 41 CTGTCGTTGCAGGTGGAGCTCACGGCAGTTGGAAGTGGCAG CTGTCGTTGCAGGTGGAGCTCACAGCAGTTGGAAGTGGCAG < 41bp 0.706609594655883 0.461089984584168 0.8393655 0.53049487 prediction 0.413219189311767 Functional Loss - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129146934 chrX:129146937 synonymous SNV . 0 24 hm5C_associated_SNPs_92843 0 0 1 EIF3H POSTAR2 ENCODE chrX:129146925-129147004
64251 chr11 134241002 134241002 1 + C T rs561326208 134241000 + 134240980 134241020 41 CTCTATGAGACCAGCATCACCTCGTCTGGCATCCTCAGTGG CTCTATGAGACCAGCATCACCTTGTCTGGCATCCTCAGTGG < 41bp 0.706607591614482 0.433696653511391 0.38166025 0.30326116 prediction 0.413215183228964 Functional Loss - GLB1L2 ENSG00000149328 CDS Human protein_coding chr11:134241000 chr11:134241002 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_92844 0 0 3 UCHL5 POSTAR2 ENCODE chr11:134240920-134241019
64251 chr17 79974724 79974724 1 + C T rs147635421 79974721 + 79974701 79974741 41 GGAGCATGCCATCTCCCCATCTGCGGCCGATGTGCTGGTGG GGAGCATGCCATCTCCCCATCTGTGGCCGATGTGCTGGTGG < 41bp 0.720266049251785 0.513661716277096 0.39786834 0.33508676 prediction 0.413208665949378 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79974721 chr17:79974724 nonsynonymous SNV 0.044 0 24 hm5C_associated_SNPs_92846 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79974705-79974746
64251 chr19 21240722 21240722 1 + T C rs61744905 21240721 + 21240701 21240741 41 TAAACATAAGGTAATTCATACTGGAGAGAAACCCTACAACT TAAACATAAGGTAATTCATACCGGAGAGAAACCCTACAACT < 41bp 0.780524629794863 0.57392228182775 0.30708328 0.3950036 prediction 0.413204695934227 Functional Loss - ZNF430 ENSG00000118620 CDS Human protein_coding chr19:21240721 chr19:21240722 synonymous SNV . 0 22 hm5C_associated_SNPs_92849 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:21240711-21240742
64251 chr1 146737658 146737658 1 + G T SARC 146737654 + 146737634 146737674 41 AGTGAAAGCTGAGGTAGCTACAGAGCTTCCCAAGAAGACAG AGTGAAAGCTGAGGTAGCTACAGATCTTCCCAAGAAGACAG < 41bp 0.71396751735898 0.507367644722166 0.84257865 0.72055423 prediction 0.413199745273628 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146737654 chr1:146737658 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_92850 0 0 1 ZNF622 POSTAR2 ENCODE chr1:146737644-146737667
64251 chr12 67696193 67696193 1 + G T STAD 67696190 + 67696170 67696210 41 CTTGGATGCTGTAGTTAGCACAAGGCATGAAATGCTTCCAG CTTGGATGCTGTAGTTAGCACAATGCATGAAATGCTTCCAG < 41bp 0.706597396687204 0.301354627314879 0.42253307 0.23901379 prediction 0.413194793374409 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67696190 chr12:67696193 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_92851 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr12:67696114-67696195
64251 chr20 45725779 45725779 1 + C T UCEC 45725777 + 45725757 45725797 41 ATTATTTTTCACTCCTTACTCACGGGGACATTTGCATCCAG ATTATTTTTCACTCCTTACTCATGGGGACATTTGCATCCAG < 41bp 0.706586996128177 0.426312784193822 0.9207497 0.9075892 prediction 0.413173992256354 Functional Loss - EYA2 ENSG00000064655 CDS Human protein_coding chr20:45725777 chr20:45725779 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_92860 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:45725750-45725780
64251 chr9 133759700 133759700 1 + G A BLCA 133759697 + 133759677 133759717 41 GGGTCCCCAATGGAGCCCTCCGGGAGTCCGGGGGCTCAGGC GGGTCCCCAATGGAGCCCTCCGGAAGTCCGGGGGCTCAGGC < 41bp 0.815161122296068 0.608576538305635 0.93007886 0.9127747 prediction 0.413169167980866 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133759697 chr9:133759700 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_92862 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:133759670-133759703
64251 chr2 120712837 120712837 1 + C T STAD 120712834 + 120712814 120712854 41 TGCATCAGGATGACCATTCCCTGCGGGAGTCAATGATCCAG TGCATCAGGATGACCATTCCCTGTGGGAGTCAATGATCCAG < 41bp 0.759140162593398 0.552561552656108 0.15385076 0.097845495 prediction 0.41315721987458 Functional Loss - PTPN4 ENSG00000088179 CDS Human protein_coding chr2:120712834 chr2:120712837 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_92866 0 0 1 PRPF8 POSTAR2 ENCODE chr2:120712833-120712912
64251 chr17 79686897 79686897 1 + G A HNSC 79686894 + 79686874 79686914 41 GCGCCGTGGAGACAGCGAAGCTCGGGCCTCTGGCCTTTTAC GCGCCGTGGAGACAGCGAAGCTCAGGCCTCTGGCCTTTTAC < 41bp 0.706578370153115 0.452602980387195 0.25174457 0.14020309 prediction 0.413156740306231 Functional Loss - SLC25A10 ENSG00000183048;ENSG00000262660 CDS Human other chr17:79686894 chr17:79686897 nonsynonymous SNV 0.250 5 24 hm5C_associated_SNPs_92867 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:79686858-79686902
64251 chr15 79614521 79614521 1 + G T UCEC 79614519 + 79614499 79614539 41 ACTGTTGAAAAGCTTCTTCACAGAAAAACGACCCATCAGCA ACTGTTGAAAAGCTTCTTCACATAAAAACGACCCATCAGCA < 41bp 0.706575011268039 0.360915850717077 0.7236837 0.41223028 prediction 0.413150022536077 Functional Loss - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79614519 chr15:79614521 stopgain 0.782 1 23 hm5C_associated_SNPs_92869 0 0 3 DDX55 POSTAR2 ENCODE chr15:79614509-79614573
64251 chr10 114925695 114925695 1 + C T SKCM 114925693 + 114925673 114925713 41 GCTCCCTGGCCGGGACCCAGCCCCAGCCGCTGTCGCTCGTC GCTCCCTGGCCGGGACCCAGCCTCAGCCGCTGTCGCTCGTC < 41bp 0.706574419448818 0.459338258229741 0.11744368 0.037281573 prediction 0.413148838897636 Functional Loss - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925693 chr10:114925695 synonymous SNV . 0 23 hm5C_associated_SNPs_92870 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:114925671-114925716
64251 chr11 118886077 118886077 1 + G T SARC 118886073 + 118886053 118886093 41 GAGTTGGGGCCAACTTTGATCACAGCTCCAGGACCAGTGCA GAGTTGGGGCCAACTTTGATCACATCTCCAGGACCAGTGCA < 41bp 0.717827190698862 0.511255496794693 0.4175219 0.16721329 prediction 0.413143387808339 Functional Loss - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118886073 chr11:118886077 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_92874 0 0 5 GRWD1 POSTAR2 ENCODE chr11:118886016-118886152
64251 chr12 57850077 57850077 1 + G A BLCA 57850074 + 57850054 57850094 41 CTGAGCACCACATCACCAACCTGGGCTGGCATACCTTAACT CTGAGCACCACATCACCAACCTGAGCTGGCATACCTTAACT < 41bp 0.821318035423107 0.61474679695721 0.849522 0.2793073 prediction 0.413142476931794 Functional Loss - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850074 chr12:57850077 nonsynonymous SNV 0.457 4 24 hm5C_associated_SNPs_92876 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:57850058-57850096
64251 chr19 58375304 58375304 1 + G A rs144694177 58375301 + 58375281 58375321 41 GGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCCAGAA GGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCCAGAA < 41bp 0.748323288590868 0.541754171263372 0.74568486 0.55947816 prediction 0.413138234654991 Functional Loss - ZNF587 ENSG00000198466 UTR3 Human protein_coding chr19:58375301 chr19:58375304 . . 0 24 hm5C_associated_SNPs_92877 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:58375294-58375332
64251 chr18 13115407 13115407 1 + G A rs140064325 13115404 + 13115384 13115424 41 AGGAGGGTCGGAGAAGTTCCCAGGAGAAGTTCAGTGTGAAA AGGAGGGTCGGAGAAGTTCCCAGAAGAAGTTCAGTGTGAAA < 41bp 0.706567154114771 0.485944949725574 0.885107 0.8007019 prediction 0.413134308229543 Functional Loss - CEP192 ENSG00000101639 intronic Human protein_coding chr18:13115404 chr18:13115407 . . 0 24 hm5C_associated_SNPs_92878 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:13115381-13115409
64251 chr19 50149816 50149816 1 + G T LUAD 50149812 + 50149792 50149832 41 ATGGCCACGGACAGCTTCCTCGCAGGGCTGGTGAGTGTCCT ATGGCCACGGACAGCTTCCTCGCATGGCTGGTGAGTGTCCT < 41bp 0.707331843560976 0.500764959227103 0.68714356 0.3827057 prediction 0.413133768667746 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50149812 chr19:50149816 nonsynonymous SNV 0.572 3 25 hm5C_associated_SNPs_92879 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50149792-50149817
64251 chr19 1086081 1086081 1 + G A rs567421506 1086078 + 1086058 1086098 41 CTCCAGCACGTCCCCTGCACCACGGCATAGCTTAGGTGCGC CTCCAGCACGTCCCCTGCACCACAGCATAGCTTAGGTGCGC < 41bp 0.706566266416576 0.468184912804077 0.10707617 0.064444214 prediction 0.413132532833151 Functional Loss - ARHGAP45 ENSG00000180448 UTR3 Human protein_coding chr19:1086078 chr19:1086081 . . 0 24 hm5C_associated_SNPs_92880 0 0 1 DDX6 POSTAR2 ENCODE chr19:1086020-1086090
64251 chr15 90170247 90170247 1 + C T SKCM 90170245 + 90170225 90170265 41 TCTCCTTTCAGTCGCGCTTTCTCCAGGAGGCGCCCCATCAG TCTCCTTTCAGTCGCGCTTTCTTCAGGAGGCGCCCCATCAG < 41bp 0.871821018529958 0.665257580564496 0.94572496 0.28602093 prediction 0.413126875930924 Functional Loss - TICRR ENSG00000140534 CDS Human protein_coding chr15:90170245 chr15:90170247 nonsynonymous SNV 0.784 2 23 hm5C_associated_SNPs_92882 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr15:90170201-90170255
64251 chr1 31192220 31192220 1 + G A rs532904072 31192217 + 31192197 31192237 41 GGGGGGATCCGGTGGTTCCACATGGTGCAGTTCTGCGCTTT GGGGGGATCCGGTGGTTCCACATAGTGCAGTTCTGCGCTTT < 41bp 0.807544924190167 0.600982720351796 0.42637086 0.26599193 prediction 0.413124407676743 Functional Loss - MATN1-AS1 ENSG00000186056 ncRNA_exonic Human antisense chr1:31192217 chr1:31192220 . . 0 24 hm5C_associated_SNPs_92883 0 0 4 DICER1 POSTAR2 GSE55333,GSM1334287 chr1:31192200-31192220
64251 chr20 43108886 43108886 1 + C T LUSC 43108883 + 43108863 43108903 41 CCCTCGACGATGCCTTCCTGCTGCGCTTCCTCCGAGCCCGC CCCTCGACGATGCCTTCCTGCTGTGCTTCCTCCGAGCCCGC < 41bp 0.748818223289477 0.542259097932119 0.082716376 0.13039348 prediction 0.413118250714717 Functional Loss - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43108883 chr20:43108886 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_92887 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:43108872-43108910
64251 chr2 65217003 65217003 1 + G A UCEC 65217000 + 65216980 65217020 41 GCCGCACGCAGGTCACCTACCTGGCCTTCCCCGGCGAGATG GCCGCACGCAGGTCACCTACCTGACCTTCCCCGGCGAGATG < 41bp 0.706552146222224 0.470515009779649 0.84067297 0.29348755 prediction 0.413104292444448 Functional Loss - SLC1A4 ENSG00000115902 CDS Human protein_coding chr2:65217000 chr2:65217003 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_92891 0 0 1 RPS3 POSTAR2 ENCODE chr2:65216994-65217048
64251 chr20 62663340 62663340 1 + G A rs139156198 62663337 + 62663317 62663357 41 CACCGCACTGTGAAGATTGACTCGGACCTGGGGGATGCCTG CACCGCACTGTGAAGATTGACTCAGACCTGGGGGATGCCTG < 41bp 0.70655202246805 0.469167552528733 0.22078764 0.06494856 prediction 0.4131040449361 Functional Loss - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62663337 chr20:62663340 synonymous SNV . 0 24 hm5C_associated_SNPs_92892 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr20:62663319-62663351
64251 chr3 71803853 71803853 1 + G A STAD 71803850 + 71803830 71803870 41 CCGCCGCAAGATGCGGCCCGCGCGCCTGGTGCCCGCCGTCA CCGCCGCAAGATGCGGCCCGCGCACCTGGTGCCCGCCGTCA < 41bp 0.796580956455911 0.590028993164768 0.33193773 0.18264443 prediction 0.413103926582286 Functional Loss - GPR27 ENSG00000170837 CDS Human protein_coding chr3:71803850 chr3:71803853 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_92893 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:71803839-71803881
64251 chr9 131038597 131038597 1 + G T UCEC 131038593 + 131038573 131038613 41 GAGTTCCTGGCCCGGTGCACCTGAGAGGTCGCTCTCCGACT GAGTTCCTGGCCCGGTGCACCTGATAGGTCGCTCTCCGACT < 41bp 0.744497359247493 0.53795162280627 0.72556865 0.40091294 prediction 0.413091472882447 Functional Loss - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131038593 chr9:131038597 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_92898 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:131038597-131038598
64251 chr2 27306086 27306086 1 + G T UCEC 27306084 + 27306064 27306104 41 TCCAGGATCGTGTGGATGCCCAGGATGAGACAGCTGCAGAG TCCAGGATCGTGTGGATGCCCATGATGAGACAGCTGCAGAG < 41bp 0.917455692358012 0.710911902178238 0.7137273 0.29462063 prediction 0.413087580359547 Functional Loss - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27306084 chr2:27306086 nonsynonymous SNV 0.040 0 23 hm5C_associated_SNPs_92900 0 0 2 GRSF1 POSTAR2 ENCODE chr2:27306053-27306089
64251 chr8 121457818 121457818 1 + G T UCEC 121457814 + 121457794 121457834 41 GGTGTCGTCGGGTGAGGGTACTGAGAATCAGCCGGGTAAGC GGTGTCGTCGGGTGAGGGTACTGATAATCAGCCGGGTAAGC < 41bp 0.72316206029042 0.51662276606976 0.86410964 0.3174277 prediction 0.41307858844132 Functional Loss - MTBP ENSG00000172167 CDS Human protein_coding chr8:121457814 chr8:121457818 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_92902 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:121457803-121457827
64251 chr9 131388796 131388796 1 + G A CESC 131388793 + 131388773 131388813 41 TGGAAGAAATCAAAGCTTTGCGCGAGGCCCACGACGCCTTC TGGAAGAAATCAAAGCTTTGCGCAAGGCCCACGACGCCTTC < 41bp 0.706534585509231 0.483129857629284 0.8614707 0.33178675 prediction 0.413069171018462 Functional Loss - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131388793 chr9:131388796 nonsynonymous SNV 0.649 1 24 hm5C_associated_SNPs_92908 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:131388780-131388800
64251 chr19 36257779 36257779 1 + C T CESC 36257776 + 36257756 36257796 41 TTCTGTACCAGTGGCGGCAGCGGCGGAAGCTTGAACAGGCT TTCTGTACCAGTGGCGGCAGCGGTGGAAGCTTGAACAGGCT < 41bp 0.770959836132135 0.564425317648158 0.8792794 0.75090533 prediction 0.413069036967953 Functional Loss - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36257776 chr19:36257779 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_92909 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:36257754-36257791
64251 chr21 17199417 17199417 1 + G T STAD 17199414 + 17199394 17199434 41 TTACTCAGTCCCGGATACCTCCAGATTTGCCCATGCATCCG TTACTCAGTCCCGGATACCTCCATATTTGCCCATGCATCCG < 41bp 0.706531231677572 0.318532249663426 0.66441745 0.32826093 prediction 0.413062463355144 Functional Loss - USP25 ENSG00000155313 CDS Human protein_coding chr21:17199414 chr21:17199417 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_92915 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:17199391-17199429
64251 chr7 129125612 129125612 1 + T C UCEC 129125611 + 129125591 129125631 41 ACTATTCATATGAGCTCTGGCTCGAGAGAGAGGTGTTTTCA ACTATTCATATGAGCTCTGGCCCGAGAGAGAGGTGTTTTCA < 41bp 0.838517367843776 0.631989907445108 0.022351265 0.021630645 prediction 0.413054920797336 Functional Loss - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129125611 chr7:129125612 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_92919 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129125600-129125628
64251 chr5 917151 917151 1 + T C LIHC 917150 + 917130 917170 41 CCGTCACCATAGAGGGGTTCCTCCAGGCCCTGTCTCTGGCA CCGTCACCATAGAGGGGTTCCCCCAGGCCCTGTCTCTGGCA < 41bp 0.85329902273927 0.646772325471506 0.9674017 0.34520942 prediction 0.413053394535528 Functional Loss - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:917150 chr5:917151 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_92920 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:917128-917171
64251 chr1 32697049 32697049 1 + G A rs189268974 32697046 + 32697026 32697066 41 AGGTTGCAGTGAGCTGAGATCACGTCATTGCACTCCATCCT AGGTTGCAGTGAGCTGAGATCACATCATTGCACTCCATCCT < 41bp 0.778906770770273 0.572386627406805 0.44150314 0.54322433 prediction 0.413040286726938 Functional Loss - EIF3I ENSG00000084623 UTR3 Human protein_coding chr1:32697046 chr1:32697049 . . 0 24 hm5C_associated_SNPs_92924 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32697038-32697073
64251 chr8 9564436 9564436 1 + C T STAD 9564433 + 9564413 9564453 41 ACTTAGCCATGGCGCTGATCCTACATTAGTCAACTGCCATG ACTTAGCCATGGCGCTGATCCTATATTAGTCAACTGCCATG < 41bp 0.706517981489184 0.479340881681256 0.89928925 0.8294276 prediction 0.413035962978367 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9564433 chr8:9564436 nonsynonymous SNV 0.203 4 24 hm5C_associated_SNPs_92926 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr8:9564418-9564441
64251 chr2 127447880 127447880 1 + C T rs191646209 127447877 + 127447857 127447897 41 TCCACCACAATGCATACTACCACCATTGCAGGTGAGTTCTC TCCACCACAATGCATACTACCACTATTGCAGGTGAGTTCTC < 41bp 0.73078050903095 0.52428218674192 0.03725046 0.024142921 prediction 0.41299664457806 Functional Loss - GYPC ENSG00000136732 CDS Human protein_coding chr2:127447877 chr2:127447880 synonymous SNV . 0 24 hm5C_associated_SNPs_92942 0 0 5 METAP2 POSTAR2 ENCODE chr2:127447830-127447882
64251 chr1 153617620 153617620 1 + C T UCEC 153617618 + 153617598 153617638 41 ACGAGGGAGAGGTGCCCTTGCTCGCCCTGTATTGACCAAGG ACGAGGGAGAGGTGCCCTTGCTTGCCCTGTATTGACCAAGG < 41bp 0.706497969175587 0.43105723284175 0.0923779 0.09752253 prediction 0.412995938351175 Functional Loss - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617618 chr1:153617620 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_92944 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:153617584-153617625
64251 chr16 69375508 69375508 1 + C T PRAD 69375505 + 69375485 69375525 41 CCATGGCGATTGTGGTATTTCATCAAGCAGACATTGGGGAA CCATGGCGATTGTGGTATTTCATTAAGCAGACATTGGGGAA < 41bp 0.742402546895934 0.535919440174471 0.35693175 0.41703358 prediction 0.412966213442925 Functional Loss - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69375505 chr16:69375508 stopgain 1.000 1 24 hm5C_associated_SNPs_92953 0 0 7 MOV10 POSTAR2 GSE37524,GSM921128 chr16:69375499-69375520
64251 chr16 1823473 1823473 1 + C T SKCM 1823471 + 1823451 1823491 41 CGCCTCGCGGTGTGCGTGGACACAGGTGCGGCGGAGGGCAC CGCCTCGCGGTGTGCGTGGACATAGGTGCGGCGGAGGGCAC < 41bp 0.777175259602469 0.570701009514669 0.8264849 0.86372507 prediction 0.412948500175599 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1823471 chr16:1823473 nonsynonymous SNV 0.979 1 23 hm5C_associated_SNPs_92959 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221662 chr16:1823472-1823473
64251 chr16 67229730 67229730 1 + G C SKCM 67229726 + 67229706 67229746 41 ATAGCAAGGACAGTGGTGAGCTCAGTTCACTCCCACTGGGC ATAGCAAGGACAGTGGTGAGCTCACTTCACTCCCACTGGGC < 41bp 0.706472604984972 0.41364822717672 0.38255286 0.28610674 prediction 0.412945209969944 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67229726 chr16:67229730 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_92964 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:67229655-67229732
64251 chr12 54448143 54448143 1 + C T rs562042098 54448141 + 54448121 54448161 41 ATGAAAAAAATTCACGTTAGCACGGGTAGGCAACTTTGCTT ATGAAAAAAATTCACGTTAGCATGGGTAGGCAACTTTGCTT < 41bp 0.830187160794443 0.623729780323156 0.48321623 0.78923136 prediction 0.412914760942573 Functional Loss - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448141 chr12:54448143 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_92975 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr12:54448140-54448165
64251 chr17 41001199 41001199 1 + G A COAD 41001196 + 41001176 41001216 41 GCTACAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGG GCTACAGCGCCCACAGCTGACTCAGCAGGTCCTGGGAAAGG < 41bp 0.801435944036742 0.594978660061584 0.111665756 0.11478418 prediction 0.412914567950317 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41001196 chr17:41001199 nonsynonymous SNV 0.983 0 24 hm5C_associated_SNPs_92976 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41001131-41001208
64251 chr6 105526519 105526519 1 + C T UCEC 105526516 + 105526496 105526536 41 CGGGCATGGCTGTACATCACCACCGTTTCCTCAGGAGGCTA CGGGCATGGCTGTACATCACCACTGTTTCCTCAGGAGGCTA < 41bp 0.728404892716847 0.521951476853762 0.1878713 0.1550233 prediction 0.412906831726169 Functional Loss - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105526516 chr6:105526519 nonsynonymous SNV 0.215 0 24 hm5C_associated_SNPs_92980 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:105526440-105526520
64251 chr8 42837793 42837793 1 + G A SKCM 42837790 + 42837770 42837810 41 GGTTAATGCCTCTTGGAAGTCAGGAGTCTTCAGACAGTCTA GGTTAATGCCTCTTGGAAGTCAGAAGTCTTCAGACAGTCTA < 41bp 0.756095885486948 0.549648114048973 0.890033 0.5543852 prediction 0.41289554287595 Functional Loss - HOOK3 ENSG00000168172 CDS Human protein_coding chr8:42837790 chr8:42837793 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_92985 0 0 10 CSTF2 POSTAR2 GSE40859,GSM1003588 chr8:42837773-42837794
64251 chr1 149858537 149858537 1 + G T UCS 149858534 + 149858514 149858554 41 TGATTTCAGTCATGTCTGGTCGTGGCAAACAAGGAGGCAAG TGATTTCAGTCATGTCTGGTCGTTGCAAACAAGGAGGCAAG < 41bp 0.706447136983782 0.325170093301486 0.44357342 0.10278511 prediction 0.412894273967563 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858534 chr1:149858537 nonsynonymous SNV 0.290 4 24 hm5C_associated_SNPs_92987 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:149858460-149858540
64251 chr19 49464139 49464139 1 + C T UCEC 49464136 + 49464116 49464156 41 CATTGGACTTCCTCCGGGAGCGGCTGTTGGGCTGGATCCAA CATTGGACTTCCTCCGGGAGCGGTTGTTGGGCTGGATCCAA < 41bp 0.710575123057252 0.504131177785016 0.5111776 0.5464978 prediction 0.412887890544471 Functional Loss - BAX ENSG00000087088 CDS Human protein_coding chr19:49464136 chr19:49464139 synonymous SNV . 0 24 hm5C_associated_SNPs_92988 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49464064-49464179
64251 chr10 105178383 105178383 1 + G T LUSC 105178379 + 105178359 105178399 41 GTCCTGTGTCTGAGCCAGAGCGAGGGGCGTGTTGTATCCTT GTCCTGTGTCTGAGCCAGAGCGAGTGGCGTGTTGTATCCTT < 41bp 0.731408389951892 0.524964580343054 0.9053445 0.44854552 prediction 0.412887619217676 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105178379 chr10:105178383 nonsynonymous SNV 0.117 1 25 hm5C_associated_SNPs_92989 0 0 2 FMR1 POSTAR2 ENCODE chr10:105178364-105178391
64251 chr19 30101445 30101445 1 + C T ESCA 30101442 + 30101422 30101462 41 TGGTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAG TGGTCCTGGAGTACTTCACCCGCTACAAGCGCAAGGAGAAG < 41bp 0.773379737505389 0.5669418004217 0.30317792 0.21665162 prediction 0.412875874167378 Functional Loss - POP4 ENSG00000105171 CDS Human protein_coding chr19:30101442 chr19:30101445 nonsynonymous SNV 0.178 0 24 hm5C_associated_SNPs_92992 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:30101432-30101456
64251 chr4 1209830 1209830 1 - G A GBM 1209833 - 1209813 1209853 41 AGCGACTGCGTGACCCTGCACTGCGGCCTCAACGAGCACAA AGCGACTGCGTGACCCTGCACTGTGGCCTCAACGAGCACAA < 41bp 0.742355468452111 0.535923530761529 0.24239743 0.14497927 prediction 0.412863875381164 Functional Loss - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1209833 chr4:1209830 synonymous SNV . 0 24 hm5C_associated_SNPs_92994 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:1209781-1209851
64251 chrX 154261803 154261803 1 + C T UCEC 154261800 + 154261780 154261820 41 AAAAGTATAGCGTGGCAACCCAGCTGTTCATTGGAGGTGTC AAAAGTATAGCGTGGCAACCCAGTTGTTCATTGGAGGTGTC < 41bp 0.739143005257393 0.532711619564382 0.7988301 0.6416146 prediction 0.412862771386021 Functional Loss - FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154261800 chrX:154261803 synonymous SNV . 0 24 hm5C_associated_SNPs_92995 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:154261789-154261825
64251 chr2 241537463 241537463 1 + A C LUAD 241537462 + 241537442 241537482 41 CTCCACCTACCTGCCGGACACAGAGGGGGCCTTCACAGTGA CTCCACCTACCTGCCGGACACCGAGGGGGCCTTCACAGTGA < 41bp 0.833264596456153 0.626835508817458 0.91499907 0.56639194 prediction 0.412858175277389 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241537462 chr2:241537463 synonymous SNV . 0 22 hm5C_associated_SNPs_92996 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241537434-241537464
64251 chr17 65715895 65715895 1 + G A rs563756333 65715892 + 65715872 65715912 41 CTGGAGAGTATGTTGTTGTACACGATAATAAGGTGAGTTTT CTGGAGAGTATGTTGTTGTACACAATAATAAGGTGAGTTTT < 41bp 0.755544205311255 0.549118571879367 0.023706555 0.025942057 prediction 0.412851266863777 Functional Loss - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65715892 chr17:65715895 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_92999 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65715807-65715902
64251 chr1 9777134 9777134 1 + C T UCEC 9777132 + 9777112 9777152 41 TGCCCCCCAGGTCCAGAAACCGCGTGCCAAACCACCTCCCA TGCCCCCCAGGTCCAGAAACCGTGTGCCAAACCACCTCCCA < 41bp 0.706423269972623 0.438916177763644 0.41942742 0.39298192 prediction 0.412846539945245 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9777132 chr1:9777134 nonsynonymous SNV 0.062 1 23 hm5C_associated_SNPs_93001 0 0 2 GEMIN5 POSTAR2 ENCODE chr1:9777099-9777165
64251 chr20 52831957 52831957 1 + A C LGG 52831956 + 52831936 52831976 41 GCCATTCTCAAGAAGAAACGCAAGAAATGTTAGAAGAAGCA GCCATTCTCAAGAAGAAACGCCAGAAATGTTAGAAGAAGCA < 41bp 0.70641738868618 0.462484464166651 0.2919651 0.17979231 prediction 0.41283477737236 Functional Loss - PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52831956 chr20:52831957 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_93003 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:52831904-52831975
64251 chr20 52831959 52831959 1 + G A STAD 52831956 + 52831936 52831976 41 GCCATTCTCAAGAAGAAACGCAAGAAATGTTAGAAGAAGCA GCCATTCTCAAGAAGAAACGCAAAAAATGTTAGAAGAAGCA < 41bp 0.70641738868618 0.495189781192104 0.2919651 0.43411416 prediction 0.41283477737236 Functional Loss - PFDN4 ENSG00000101132 CDS Human protein_coding chr20:52831956 chr20:52831959 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93004 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:52831904-52831975
64251 chr3 53883724 53883724 1 + G A OV 53883721 + 53883701 53883741 41 GCTACAACATGATCTAATCCCCGGAGACTTGAGGGACCTCC GCTACAACATGATCTAATCCCCGAAGACTTGAGGGACCTCC < 41bp 0.791342151913338 0.584927211037609 0.1810562 0.016391218 prediction 0.412829881751457 Functional Loss - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53883721 chr3:53883724 nonsynonymous SNV 0.847 3 24 hm5C_associated_SNPs_93008 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:53883695-53883731
64251 chr7 65216099 65216099 1 + G A rs4718273 65216096 + 65216076 65216116 41 GCTCTGGGCTCTCCGCGTGCCGCGTCGCTTTCTTTTCTTCC GCTCTGGGCTCTCCGCGTGCCGCATCGCTTTCTTTTCTTCC < 41bp 0.706414753933298 0.472365007606474 0.012322664 0.03359458 prediction 0.412829507866595 Functional Loss - CCT6P1 ENSG00000228409 upstream Human transcribed_unprocessed_pseudogene chr7:65216096 chr7:65216099 . . 0 24 hm5C_associated_SNPs_93009 0 0 4 DIS3L2 POSTAR2 GSE81537,GSM2155557 chr7:65216080-65216100
64251 chr16 69905834 69905834 1 + G T UCEC 69905830 + 69905810 69905850 41 CACAGTGGCTTGGCCAATGGCACAGGTGAGTGATGGCACCG CACAGTGGCTTGGCCAATGGCACATGTGAGTGATGGCACCG < 41bp 0.709097621478685 0.502683404462319 0.346909 0.2957191 prediction 0.412828434032732 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69905830 chr16:69905834 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_93010 0 0 2 BUD13 POSTAR2 ENCODE chr16:69905804-69905855
64251 chr12 6630172 6630172 1 + G A UCEC 6630169 + 6630149 6630189 41 CAGAAAGGCCATCATTCTCACTCGAGAAGCCACAGGCCACT CAGAAAGGCCATCATTCTCACTCAAGAAGCCACAGGCCACT < 41bp 0.802572477540613 0.596159760949693 0.61991936 0.22145665 prediction 0.412825433181839 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6630169 chr12:6630172 nonsynonymous SNV 0.850 0 24 hm5C_associated_SNPs_93013 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6630153-6630181
64251 chr4 103537883 103537883 1 + C T rs4648144 103537881 + 103537861 103537901 41 CTGAATCATTCTCGATTTAACTCGAGACCTTTTCAACTTGG CTGAATCATTCTCGATTTAACTTGAGACCTTTTCAACTTGG < 41bp 0.831512945352243 0.625101404481945 0.15315735 0.036405325 prediction 0.412823081740595 Functional Loss - NFKB1 ENSG00000109320 UTR3 Human protein_coding chr4:103537881 chr4:103537883 . . 0 23 hm5C_associated_SNPs_93014 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:103537863-103537899
64251 chr3 122399742 122399742 1 + C T SKCM 122399740 + 122399720 122399760 41 CGGAGCTGAGGATGGCTGTGCCCGGCTCCTTCCCGCTGCTG CGGAGCTGAGGATGGCTGTGCCTGGCTCCTTCCCGCTGCTG < 41bp 0.712508883287531 0.50609887869105 0.72700506 0.5011109 prediction 0.412820009192961 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399740 chr3:122399742 synonymous SNV . 0 23 hm5C_associated_SNPs_93016 0 0 8 DDX3X POSTAR2 ENCODE chr3:122399731-122399804
64251 chrX 48759297 48759297 1 + G T COAD 48759294 + 48759274 48759314 41 TCCGTGGTTACCAAATCGGCCAAGAAGCTCAGAAGCAGTAA TCCGTGGTTACCAAATCGGCCAATAAGCTCAGAAGCAGTAA < 41bp 0.706409006659553 0.344009456990283 0.22585315 0.121643305 prediction 0.412818013319106 Functional Loss - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759294 chrX:48759297 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_93018 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:48759265-48759297
64251 chr20 34827916 34827916 1 + G T SARC 34827913 + 34827893 34827933 41 GACTATAACTCCTGGGAGGTCGGGCCCAAGTTCCGGGGCGT GACTATAACTCCTGGGAGGTCGGTCCCAAGTTCCGGGGCGT < 41bp 0.706407648735283 0.300068967802039 0.81964076 0.30249166 prediction 0.412815297470565 Functional Loss - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34827913 chr20:34827916 synonymous SNV . 0 24 hm5C_associated_SNPs_93019 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:34827871-34827926
64251 chr12 6948279 6948279 1 + C T UCEC 6948277 + 6948257 6948297 41 TGTGCCCTGGCACTGTGGCACACGTGGGCACCTGAGCACAG TGTGCCCTGGCACTGTGGCACATGTGGGCACCTGAGCACAG < 41bp 0.706406538703901 0.450550509807596 0.32202354 0.35424256 prediction 0.412813077407802 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6948277 chr12:6948279 nonsynonymous SNV 0.988 3 23 hm5C_associated_SNPs_93020 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6948241-6948286
64251 chr7 141463974 141463974 1 + G T CESC 141463972 + 141463952 141463992 41 TGCTGACATGATGGGACTCACCGAGGGGGTGTTCCTGATTC TGCTGACATGATGGGACTCACCTAGGGGGTGTTCCTGATTC < 41bp 0.706400942978581 0.365578595093709 0.79565585 0.09721622 prediction 0.412801885957163 Functional Loss - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141463972 chr7:141463974 stopgain 0.001 0 23 hm5C_associated_SNPs_93023 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:141463814-141464006
64251 chr19 8551120 8551120 1 + G A SARC 8551117 + 8551097 8551137 41 CATGGGCCCGGCCCTGGGCGCTGGCATTGAGCGCATGGGCC CATGGGCCCGGCCCTGGGCGCTGACATTGAGCGCATGGGCC < 41bp 0.825592458489519 0.619191591858885 0.10112572 0.054462552 prediction 0.412801733261267 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8551117 chr19:8551120 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_93024 0 0 22 TARDBP POSTAR2 DRA001158,DRS012386 chr19:8551073-8551120
64251 chr17 29222025 29222025 1 + C T rs189060490 29222023 + 29222003 29222043 41 CTTCATGGAAAAGTATATTTCTCGATGTACATTTTAAACAA CTTCATGGAAAAGTATATTTCTTGATGTACATTTTAAACAA < 41bp 0.831597631568943 0.625197400115275 0.6065776 0.07144073 prediction 0.412800462907336 Functional Loss - ATAD5 ENSG00000176208 UTR3 Human protein_coding chr17:29222023 chr17:29222025 . . 0 23 hm5C_associated_SNPs_93025 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:29221866-29222043
64251 chr17 80012405 80012405 1 + G A UCEC 80012402 + 80012382 80012422 41 TCAGGGAGCTGCAGAACGCACCCGACGCCATCCCTGAGAGC TCAGGGAGCTGCAGAACGCACCCAACGCCATCCCTGAGAGC < 41bp 0.826478826771632 0.62008132977685 0.13172805 0.06610417 prediction 0.412794993989565 Functional Loss - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012402 chr17:80012405 nonsynonymous SNV 0.338 2 24 hm5C_associated_SNPs_93026 0 0 3 PPIG POSTAR2 ENCODE chr17:80012399-80012467
64251 chr16 2578111 2578111 1 + G T UCEC 2578107 + 2578087 2578127 41 GCAGAGGATGCTGTGTGGAGCGGAGCCACCTTCATCACCCA GCAGAGGATGCTGTGTGGAGCGGATCCACCTTCATCACCCA < 41bp 0.706397217730388 0.483414025474741 0.34923524 0.23795718 prediction 0.412794435460776 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578107 chr16:2578111 nonsynonymous SNV 0.972 4 25 hm5C_associated_SNPs_93028 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:2578101-2578135
64251 chr6 33179547 33179547 1 + C T SKCM 33179545 + 33179525 33179565 41 AATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCG AATGCCACAGTGGACCACCTCTTCAAGTACTTGGCCCTGCG < 41bp 0.831193622728975 0.624798304458709 0.9640056 0.15083107 prediction 0.412790636540531 Functional Loss - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179545 chr6:33179547 nonsynonymous SNV 0.912 5 23 hm5C_associated_SNPs_93029 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:33179511-33179551
64251 chr17 58761378 58761378 1 + T C UCEC 58761377 + 58761357 58761397 41 TGGAAAGTGTTGTGACTTTTCTGCAGGATGTTGTGCCACAG TGGAAAGTGTTGTGACTTTTCCGCAGGATGTTGTGCCACAG < 41bp 0.706394208230101 0.480687133786362 0.27888364 0.36916435 prediction 0.412788416460202 Functional Loss - BCAS3 ENSG00000141376 CDS Human protein_coding chr17:58761377 chr17:58761378 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_93030 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:58761368-58761397
64251 chr19 21366817 21366817 1 + A T COAD 21366815 + 21366795 21366835 41 GAGAGAAACTCTACAAATGTCAAGAATGTGGGAAAGCCTTT GAGAGAAACTCTACAAATGTCATGAATGTGGGAAAGCCTTT < 41bp 0.71816935271226 0.511779962849624 0.096374154 0.120544076 prediction 0.412778779725272 Functional Loss - ZNF431 ENSG00000196705 CDS Human protein_coding chr19:21366815 chr19:21366817 stopgain 0.036 0 23 hm5C_associated_SNPs_93034 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:21366806-21366827
64251 chr11 43876335 43876335 1 + C T UCEC 43876332 + 43876312 43876352 41 GCCAACTTTGGATAAGCCCTCTCCGGAGACGTTTGTGAAGT GCCAACTTTGGATAAGCCCTCTCTGGAGACGTTTGTGAAGT < 41bp 0.706387564732625 0.471042339124659 0.36997265 0.2170999 prediction 0.412775129465249 Functional Loss - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43876332 chr11:43876335 nonsynonymous SNV 0.020 2 24 hm5C_associated_SNPs_93037 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:43876322-43876355
64251 chr7 106508992 106508992 1 + G T HNSC 106508990 + 106508970 106509010 41 GAGTGGCCACTGGTGGATGACTGCACGGGAGTCACCGGCTA GAGTGGCCACTGGTGGATGACTTCACGGGAGTCACCGGCTA < 41bp 0.914200270029706 0.707820693889164 0.31272152 0.18267152 prediction 0.412759152281084 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508990 chr7:106508992 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_93042 0 0 1 FXR2 POSTAR2 ENCODE chr7:106508931-106508996
64251 chr11 10800359 10800359 1 + C T COAD 10800357 + 10800337 10800377 41 GGCCGGCAGTCCCCGGAGGCCACGAAGACAGCGGTCAGATC GGCCGGCAGTCCCCGGAGGCCATGAAGACAGCGGTCAGATC < 41bp 0.85933315600122 0.652954790046481 0.30690128 0.36871308 prediction 0.412756731909478 Functional Loss - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10800357 chr11:10800359 stopgain 0.296 0 23 hm5C_associated_SNPs_93044 0 0 4 DDX24 POSTAR2 ENCODE chr11:10800287-10800364
64251 chr19 38882717 38882717 1 + G A BLCA 38882714 + 38882694 38882734 41 CCTGCAGAGGCTGATGAGTTCCAGAAGAGCCTGCTGGCTGC CCTGCAGAGGCTGATGAGTTCCAAAAGAGCCTGCTGGCTGC < 41bp 0.824592802409475 0.618215161331646 0.62254715 0.3496289 prediction 0.412755282155658 Functional Loss - SPRED3 ENSG00000188766 CDS Human protein_coding chr19:38882714 chr19:38882717 synonymous SNV . 0 24 hm5C_associated_SNPs_93045 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:38882706-38882754
64251 chr21 17250751 17250751 1 + G A LUAD 17250748 + 17250728 17250768 41 TGAACTCTGTGAGCGATTTGCCCGAATCATGTTGTCCCTCA TGAACTCTGTGAGCGATTTGCCCAAATCATGTTGTCCCTCA < 41bp 0.734756311487152 0.528379591555554 0.04457909 0.015403479 prediction 0.412753439863194 Functional Loss - USP25 ENSG00000155313 CDS Human protein_coding chr21:17250748 chr21:17250751 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_93049 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917674 chr21:17250698-17250755
64251 chr5 79950675 79950675 1 - A G rs141080879 79950676 - 79950656 79950696 41 GCCAGGGTCCACCTGGTCGGCTGCACCTGTGGAGGAGGAGG GCCAGGGTCCACCTGGTCGGCCGCACCTGTGGAGGAGGAGG < 41bp 0.717515168658137 0.511138833578952 0.36963385 0.26646417 prediction 0.412752670158369 Functional Loss - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79950676 chr5:79950675 synonymous SNV . 0 22 hm5C_associated_SNPs_93050 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr5:79950667-79950689
64251 chr3 25502755 25502755 1 + G A PRAD 25502752 + 25502732 25502772 41 CATCTCCACTTCCTCCCCCTCGAGTGTACAAACCCTGCTTC CATCTCCACTTCCTCCCCCTCGAATGTACAAACCCTGCTTC < 41bp 0.706376293245802 0.460591127137194 0.56083214 0.27895522 prediction 0.412752586491604 Functional Loss - RARB ENSG00000077092 CDS Human protein_coding chr3:25502752 chr3:25502755 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_93051 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:25502719-25502768
64251 chr3 153958330 153958330 1 + G A UCEC 153958327 + 153958307 153958347 41 CTGACAGTCCTTAGTAACCACGCGAATGAGAAAGTGGAGAT CTGACAGTCCTTAGTAACCACGCAAATGAGAAAGTGGAGAT < 41bp 0.796507227143704 0.590134180069799 0.4858367 0.4236493 prediction 0.412746094147809 Functional Loss - ARHGEF26 ENSG00000114790 CDS Human protein_coding chr3:153958327 chr3:153958330 synonymous SNV . 0 24 hm5C_associated_SNPs_93056 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:153958326-153958363
64251 chr17 6014170 6014170 1 + G A LUAD 6014167 + 6014147 6014187 41 TTGTCAAGCTTCCCAGGAGCCGGGAACACATGGGCACGGCA TTGTCAAGCTTCCCAGGAGCCGGAAACACATGGGCACGGCA < 41bp 0.800450844435764 0.594080842314772 0.78298724 0.3726895 prediction 0.412740004241983 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6014167 chr17:6014170 synonymous SNV . 0 24 hm5C_associated_SNPs_93059 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6014149-6014178
64251 chr4 88903741 88903741 1 + C T HNSC 88903739 + 88903719 88903759 41 CCCGTTGCCCAGGACCTGAACGCGCCTTCTGATTGGGACAG CCCGTTGCCCAGGACCTGAACGTGCCTTCTGATTGGGACAG < 41bp 0.706363830793526 0.43782669640539 0.2561313 0.2133331 prediction 0.412727661587052 Functional Loss - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903739 chr4:88903741 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_93063 0 0 4 RPS3 POSTAR2 ENCODE chr4:88903701-88903749
64251 chr1 229772162 229772162 1 + A C UCEC 229772158 + 229772138 229772178 41 CAGAGCCAGAGCTGTGGCTGCAGAAGGTCAGTGACTCTGTG CAGAGCCAGAGCTGTGGCTGCAGACGGTCAGTGACTCTGTG < 41bp 0.706362410958642 0.297376166506756 0.6836921 0.8801115 prediction 0.412724821917283 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772158 chr1:229772162 nonsynonymous SNV 0.991 3 25 hm5C_associated_SNPs_93064 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229772148-229772217
64251 chr15 41100005 41100005 1 + G C BRCA 41100001 + 41099981 41100021 41 GCTCTGCAGACCCTGCGGTGCTGGGAGCCACCATGGAGAGT GCTCTGCAGACCCTGCGGTGCTGGCAGCCACCATGGAGAGT < 41bp 0.706361431669138 0.405867776169217 0.33480486 0.2789735 prediction 0.412722863338276 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41100001 chr15:41100005 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_93065 0 0 10 BUD13 POSTAR2 ENCODE chr15:41099927-41100010
64251 chr19 571513 571513 1 + G A rs28915397 571510 + 571490 571530 41 TCTGGGTTTACGCGTCACCTCGGGCGGGACCCGATCCTCCG TCTGGGTTTACGCGTCACCTCGGACGGGACCCGATCCTCCG < 41bp 0.811675027898913 0.605313604624563 0.9073019 0.35096353 prediction 0.4127228465487 Functional Loss - BSG ENSG00000267751 ncRNA_exonic Human antisense chr19:571510 chr19:571513 . . 0 24 hm5C_associated_SNPs_93066 0 0 1 FUS POSTAR2 SRX029328 chr19:571501-571522
64251 chr1 101705431 101705431 1 + G T LUSC 101705429 + 101705409 101705449 41 TCTTCAGAGCGGAGTACTTCCTGGTGTTAGCTGTGCTCAAC TCTTCAGAGCGGAGTACTTCCTTGTGTTAGCTGTGCTCAAC < 41bp 0.910569140019099 0.704207977520244 0.702585 0.23209617 prediction 0.412722324997711 Functional Loss - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101705429 chr1:101705431 synonymous SNV . 0 23 hm5C_associated_SNPs_93067 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr1:101705431-101705467
64251 chr2 98264524 98264524 1 + C T rs144164793 98264521 + 98264501 98264541 41 AAGGCGAGGCCCAGCGATGCCCCCGCTGTGGAGCCCATTAC AAGGCGAGGCCCAGCGATGCCCCTGCTGTGGAGCCCATTAC < 41bp 0.733077840464099 0.526717540229313 0.030841947 0.06778893 prediction 0.412720600469572 Functional Loss - COX5B ENSG00000135940 CDS Human protein_coding chr2:98264521 chr2:98264524 nonsynonymous SNV 0.675 0 24 hm5C_associated_SNPs_93068 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:98264519-98264547
64251 chr19 36719719 36719719 1 + C T rs117032967 36719717 + 36719697 36719737 41 AAAGAAGTGGGAAGGATCTGCGCGGGTGAGTAAATGACAGG AAAGAAGTGGGAAGGATCTGCGTGGGTGAGTAAATGACAGG < 41bp 0.732783363963417 0.526423149134478 0.6270718 0.55259466 prediction 0.412720429657878 Functional Loss - ZNF146 ENSG00000167635 UTR5 Human protein_coding chr19:36719717 chr19:36719719 . . 0 23 hm5C_associated_SNPs_93070 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36719610-36719742
64251 chr7 64378633 64378633 1 + C T STAD 64378630 + 64378610 64378650 41 CTGGAGCAAGGAAAAGAGCCCTGCAATATGAAGAGACATGC CTGGAGCAAGGAAAAGAGCCCTGTAATATGAAGAGACATGC < 41bp 0.706356354822059 0.475083180531953 0.3733799 0.46987712 prediction 0.412712709644117 Functional Loss - ZNF273 ENSG00000198039 CDS Human protein_coding chr7:64378630 chr7:64378633 synonymous SNV . 0 24 hm5C_associated_SNPs_93075 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:64378630-64378654
64251 chr16 88781082 88781082 1 + C T rs61744519 88781079 + 88781059 88781099 41 CCTGACTGAGACCCGGACACCCCCGGGGCCCTGCTGTTCTC CCTGACTGAGACCCGGACACCCCTGGGGCCCTGCTGTTCTC < 41bp 0.706356111529068 0.497636286745044 0.13243368 0.0872173 prediction 0.412712223058137 Functional Loss - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781079 chr16:88781082 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_93076 0 0 1 PPIG POSTAR2 ENCODE chr16:88781056-88781136
64251 chr7 5267771 5267771 1 + C T STAD 5267768 + 5267748 5267788 41 CCGCGGTTGTTGGTGGGTGCCGCCGACGGGTACCTGTACAT CCGCGGTTGTTGGTGGGTGCCGCTGACGGGTACCTGTACAT < 41bp 0.76514144114497 0.558788294909746 0.09509051 0.06682548 prediction 0.412706292470447 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5267768 chr7:5267771 synonymous SNV . 0 24 hm5C_associated_SNPs_93078 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:5267742-5267784
64251 chr1 87380809 87380809 1 + G A BLCA 87380806 + 87380786 87380826 41 GCGATGCTCTTCTTGGAAAACCAGATCCAGAAACTGGAGGA GCGATGCTCTTCTTGGAAAACCAAATCCAGAAACTGGAGGA < 41bp 0.706347808439724 0.478412736184168 0.46210638 0.38584772 prediction 0.412695616879447 Functional Loss - HS2ST1 ENSG00000153936 CDS Human protein_coding chr1:87380806 chr1:87380809 synonymous SNV . 0 24 hm5C_associated_SNPs_93080 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:87380796-87380832
64251 chrX 68749542 68749542 1 + C T UCEC 68749539 + 68749519 68749559 41 AAACCCACCAGCAGCAATTCCACCACTCCTATTTCCACCAC AAACCCACCAGCAGCAATTCCACTACTCCTATTTCCACCAC < 41bp 0.744077251205973 0.537733134436139 0.0718492 0.20621091 prediction 0.412688233539667 Functional Loss - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68749539 chrX:68749542 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93082 0 0 2 NOP56 POSTAR2 GSE43666,GSM1067863 chrX:68749532-68749570
64251 chr6 1390486 1390486 1 + C T SKCM 1390484 + 1390464 1390504 41 GCTGCGGCGGCCCGAGAAGCCGCCCTACTCGTACATCGCGC GCTGCGGCGGCCCGAGAAGCCGTCCTACTCGTACATCGCGC < 41bp 0.796554910337609 0.590210827810172 0.22524077 0.24780384 prediction 0.412688165054872 Functional Loss - FOXF2 ENSG00000137273 CDS Human protein_coding chr6:1390484 chr6:1390486 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_93084 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:1390479-1390523
64251 chr19 6836517 6836517 1 + C T UCEC 6836514 + 6836494 6836534 41 CTGGAGCCATTGGACCCTTTCTACGGCTCAACCCTGGAGAC CTGGAGCCATTGGACCCTTTCTATGGCTCAACCCTGGAGAC < 41bp 0.706343661598343 0.480273596753317 0.068414986 0.0756298 prediction 0.412687323196686 Functional Loss - VAV1 ENSG00000141968 CDS Human protein_coding chr19:6836514 chr19:6836517 nonsynonymous SNV 0.770 2 24 hm5C_associated_SNPs_93085 0 0 2 UCHL5 POSTAR2 ENCODE chr19:6836510-6836566
64251 chr10 114910795 114910795 1 + A T LIHC 114910791 + 114910771 114910811 41 TGGTCCCACCACATCATACGCTACACACGACGGGCATTCCG TGGTCCCACCACATCATACGCTACTCACGACGGGCATTCCG < 41bp 0.706342332467538 0.405322334283123 0.17283636 0.024421245 prediction 0.412684664935075 Functional Loss - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114910791 chr10:114910795 nonsynonymous SNV 0.995 5 25 hm5C_associated_SNPs_93086 0 0 1 IGF2BP1 POSTAR2 ENCODE chr10:114910755-114910876
64251 chr10 51585131 51585131 1 + C T UCEC 51585128 + 51585108 51585148 41 GTGTGCAGAGCCAATGAGCCCTGCACAAGCTTTGCAGAGTG GTGTGCAGAGCCAATGAGCCCTGTACAAGCTTTGCAGAGTG < 41bp 0.796322598898589 0.589983607771623 0.10589367 0.19963339 prediction 0.412677982253931 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51585128 chr10:51585131 synonymous SNV . 0 24 hm5C_associated_SNPs_93087 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:51585095-51585261
64251 chr11 69467979 69467979 1 - G A rs191306538 69467981 - 69467961 69468001 41 AAATGGAGCTGCGGCCTGTCCCCGGTGTGGGCACCGCCCCT AAATGGAGCTGCGGCCTGTCCCTGGTGTGGGCACCGCCCCT < 41bp 0.784531289337772 0.578202199510843 0.36494553 0.26167104 prediction 0.412658179653858 Functional Loss - CCND1 ENSG00000110092 UTR3 Human protein_coding chr11:69467981 chr11:69467979 . . 0 23 hm5C_associated_SNPs_93099 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:69467949-69467995
64251 chr18 48604705 48604705 1 + G A PAAD 48604702 + 48604682 48604722 41 AGGATGAGTTTTGTGAAAGGCTGGGGACCGGATTACCCAAG AGGATGAGTTTTGTGAAAGGCTGAGGACCGGATTACCCAAG < 41bp 0.768460501159192 0.562134286189329 0.42057693 0.2292167 prediction 0.412652429939725 Functional Loss - SMAD4 ENSG00000141646 CDS Human protein_coding chr18:48604702 chr18:48604705 stopgain 0.998 1 24 hm5C_associated_SNPs_93101 1 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:48604684-48604713
64251 chr14 96001666 96001666 1 + C T rs28611006 96001664 + 96001644 96001684 41 TGGTGCAGATCCTGCGGCTGCACGGCGTCCGCGATTACGCG TGGTGCAGATCCTGCGGCTGCATGGCGTCCGCGATTACGCG < 41bp 0.806556827784248 0.600232878951644 0.43140763 0.47761995 prediction 0.412647897665209 Functional Loss - GLRX5 ENSG00000182512 CDS Human protein_coding chr14:96001664 chr14:96001666 synonymous SNV . 0 23 hm5C_associated_SNPs_93104 1 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:96001651-96001674
64251 chr1 212459623 212459623 1 + C T rs351403 212459621 + 212459601 212459641 41 AGGCAGAGCTGCACCCGCTGCCCCAGCTCAAAGGTAACCTC AGGCAGAGCTGCACCCGCTGCCTCAGCTCAAAGGTAACCTC < 41bp 0.706321580160068 0.447781689691813 0.38957292 0.15006298 prediction 0.412643160320135 Functional Loss - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212459621 chr1:212459623 synonymous SNV . 0 23 hm5C_associated_SNPs_93108 0 0 5 FMR1 POSTAR2 ENCODE chr1:212459547-212459632
64251 chr12 69042539 69042539 1 + G A HNSC 69042536 + 69042516 69042556 41 TAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTG TAAGCTAGTCGTTCTTGGCTCAGAAGGCGTTGGAAAGTCTG < 41bp 0.797995384023978 0.591673883084378 0.8294265 0.31647915 prediction 0.412643001879201 Functional Loss - RAP1B ENSG00000127314 CDS Human protein_coding chr12:69042536 chr12:69042539 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93109 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69042504-69042550
64251 chr5 145890187 145890187 1 + G A UCEC 145890184 + 145890164 145890204 41 CCTCCCACAGCATCGGAGCCCACGAGACGATCAACAAAATA CCTCCCACAGCATCGGAGCCCACAAGACGATCAACAAAATA < 41bp 0.773893734656113 0.567577652222347 0.11336166 0.09797141 prediction 0.412632164867532 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145890184 chr5:145890187 synonymous SNV . 0 24 hm5C_associated_SNPs_93111 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:145890139-145890187
64251 chr7 6063194 6063194 1 - G A UCEC 6063196 - 6063176 6063216 41 TGGAGTACAGACCACAGCACCACGTCTGCTACGGTGAGTTC TGGAGTACAGACCACAGCACCATGTCTGCTACGGTGAGTTC < 41bp 0.822531115773795 0.616216461038188 0.16235378 0.12966111 prediction 0.412629309471213 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063196 chr7:6063194 nonsynonymous SNV 0.162 1 23 hm5C_associated_SNPs_93113 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6063181-6063219
64251 chr16 679996 679996 1 + A C rs572184323 679995 + 679975 680015 41 CCTGGGTCAGAGGTCAGACACAGGGTCAGGGGGACACTCCC CCTGGGTCAGAGGTCAGACACCGGGTCAGGGGGACACTCCC < 41bp 0.81817572542083 0.611865587581845 0.9410908 0.9232826 prediction 0.412620275677969 Functional Loss - RAB40C ENSG00000127578;ENSG00000197562 upstream;downstream Human other chr16:679995 chr16:679996 . . 0 22 hm5C_associated_SNPs_93115 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:679974-680009
64251 chr11 76507662 76507662 1 + G A rs369746144 76507659 + 76507639 76507679 41 CGGAGGCCTGGCTCCAGCCCCAAGGTGGCCCTGCACTGCGT CGGAGGCCTGGCTCCAGCCCCAAAGTGGCCCTGCACTGCGT < 41bp 0.822352998928808 0.616045972721393 0.655313 0.1913147 prediction 0.412614052414829 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507659 chr11:76507662 synonymous SNV . 0 24 hm5C_associated_SNPs_93120 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76507628-76507675
64251 chr11 60695125 60695125 1 + C T BLCA 60695123 + 60695103 60695143 41 CTCCCTCCAGGTGGTCCCCCCTCGAGTCACTGAGCCCCACC CTCCCTCCAGGTGGTCCCCCCTTGAGTCACTGAGCCCCACC < 41bp 0.850646642755351 0.644339816935324 0.90381426 0.36396056 prediction 0.412613651640054 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60695123 chr11:60695125 stopgain 0.917 0 23 hm5C_associated_SNPs_93121 0 0 2 BUD13 POSTAR2 ENCODE chr11:60695110-60695157
64251 chr15 40756213 40756213 1 + G A BLCA 40756210 + 40756190 40756230 41 TCTCTGCCCTCTGGGAGAACCCCGAGTCAGGTACCTCTCCC TCTCTGCCCTCTGGGAGAACCCCAAGTCAGGTACCTCTCCC < 41bp 0.796715379267245 0.590409959099139 0.9008571 0.8488128 prediction 0.412610840336214 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756210 chr15:40756213 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_93122 0 0 2 PPIG POSTAR2 ENCODE chr15:40756150-40756221
64251 chrX 100356187 100356187 1 + C T LUAD 100356185 + 100356165 100356205 41 CCAAGCAACTCGAAGAACATCTCAAAACATGGACAAAACAA CCAAGCAACTCGAAGAACATCTTAAAACATGGACAAAACAA < 41bp 0.706297580408788 0.418279140423767 0.3576194 0.08044425 prediction 0.412595160817575 Functional Loss - CENPI ENSG00000102384 CDS Human protein_coding chrX:100356185 chrX:100356187 nonsynonymous SNV 0.160 0 23 hm5C_associated_SNPs_93126 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:100356150-100356198
64251 chr17 40120540 40120540 1 + C T KIRC 40120537 + 40120517 40120557 41 GGTGCTGGTGGAGCCCAAGACGGCGTGGCGGCTGGACTGTG GGTGCTGGTGGAGCCCAAGACGGTGTGGCGGCTGGACTGTG < 41bp 0.755152093118341 0.548860791844602 0.8512325 0.49473023 prediction 0.412582602547478 Functional Loss - CNP ENSG00000173786 CDS Human protein_coding chr17:40120537 chr17:40120540 nonsynonymous SNV 0.908 0 24 hm5C_associated_SNPs_93134 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:40120540-40120560
64251 chr16 8875858 8875858 1 + A C rs1641031 8875854 + 8875834 8875874 41 GGGGACAGGAGGATTCAGCTCAGGAGTAAGGGAAGAGGTCC GGGGACAGGAGGATTCAGCTCAGGCGTAAGGGAAGAGGTCC < 41bp 0.929144715592545 0.722855405504835 0.8876054 0.8848049 prediction 0.41257862017542 Functional Loss - ABAT ENSG00000183044 UTR3 Human protein_coding chr16:8875854 chr16:8875858 . . 0 25 hm5C_associated_SNPs_93138 1 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:8875831-8875860
64251 chr1 214171443 214171443 1 + C T BRCA 214171441 + 214171421 214171461 41 TTAGACTTAACTAGGGATACCACGAGTCTGAGGACCAAGAT TTAGACTTAACTAGGGATACCATGAGTCTGAGGACCAAGAT < 41bp 0.84290306338049 0.636616575506727 0.12029943 0.09578556 prediction 0.412572975747525 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171441 chr1:214171443 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_93142 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:214171415-214171444
64251 chr14 105222095 105222095 1 + C T LGG 105222093 + 105222073 105222113 41 TACAGGGGCCCCGAGGGCTGCACGTGGGCAGATGCTGATTG TACAGGGGCCCCGAGGGCTGCATGTGGGCAGATGCTGATTG < 41bp 0.824968009375219 0.618681886039291 0.7604735 0.7429902 prediction 0.412572246671855 Functional Loss - SIVA1 ENSG00000184990 CDS Human protein_coding chr14:105222093 chr14:105222095 nonsynonymous SNV 0.069 2 23 hm5C_associated_SNPs_93144 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:105221975-105222150
64251 chr7 116528204 116528204 1 + C T SKCM 116528201 + 116528181 116528221 41 GTGCGTATAGCAGCAAAATTCATCATTCATGCCCCTCCTGG GTGCGTATAGCAGCAAAATTCATTATTCATGCCCCTCCTGG < 41bp 0.742373024730554 0.536092256448334 0.083420396 0.09148368 prediction 0.412561536564439 Functional Loss - CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116528201 chr7:116528204 synonymous SNV . 0 24 hm5C_associated_SNPs_93153 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116528191-116528232
64251 chr11 64878997 64878997 1 + C T STAD 64878994 + 64878974 64879014 41 AAGTGGTGGCCTCTGCTGCCCTGCGCTGCCCAGACCCTGTG AAGTGGTGGCCTCTGCTGCCCTGTGCTGCCCAGACCCTGTG < 41bp 0.71881478194264 0.512534609035173 0.10499942 0.16293705 prediction 0.412560345814934 Functional Loss - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878994 chr11:64878997 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_93154 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64878979-64879006
64251 chr18 2595561 2595561 1 + G A BLCA 2595558 + 2595538 2595578 41 TTAATAAATTAACCAAGGACCTGGAAGCTGAACAACAGAAG TTAATAAATTAACCAAGGACCTGAAAGCTGAACAACAGAAG < 41bp 0.750674470921439 0.544395523267403 0.33441758 0.25449976 prediction 0.412557895308072 Functional Loss - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2595558 chr18:2595561 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_93155 0 0 16 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr18:2595533-2595562
64251 chr3 30686357 30686357 1 + C T UCEC 30686354 + 30686334 30686374 41 CAGAAATCCTGCATGAGCAACTGCAGCATCACCTCCATCTG CAGAAATCCTGCATGAGCAACTGTAGCATCACCTCCATCTG < 41bp 0.70627563901255 0.481476665206593 0.30352473 0.25063968 prediction 0.412551278025101 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30686354 chr3:30686357 synonymous SNV . 0 24 hm5C_associated_SNPs_93157 0 0 2 LIN28B POSTAR2 ENCODE chr3:30686301-30686371
64251 chr14 90455406 90455406 1 + C T UCEC 90455403 + 90455383 90455423 41 ACTGGGGAAGGAAAGCAAGACTCCAGGAAAAAGCTCTGTTC ACTGGGGAAGGAAAGCAAGACTCTAGGAAAAAGCTCTGTTC < 41bp 0.784353240214297 0.578083612678587 0.924718 0.8487252 prediction 0.412539255071419 Functional Loss - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90455403 chr14:90455406 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_93159 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:90455399-90455427
64251 chr14 74665639 74665639 1 + C T HNSC 74665637 + 74665617 74665657 41 GATTCCAGCCAGAGAGATGACACGGGGGAAATTCCTCAATA GATTCCAGCCAGAGAGATGACATGGGGGAAATTCCTCAATA < 41bp 0.843645310637051 0.637375694954345 0.2237331 0.47892857 prediction 0.412539231365412 Functional Loss - LIN52 ENSG00000205659 CDS Human protein_coding chr14:74665637 chr14:74665639 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_93160 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:74665635-74665663
64251 chr4 89334244 89334244 1 + G A BLCA 89334241 + 89334221 89334261 41 TACCACAGATAACTACGTGTCTCGAGGATGATCTGCTCAGA TACCACAGATAACTACGTGTCTCAAGGATGATCTGCTCAGA < 41bp 0.802123460950608 0.595856673960931 0.39437708 0.2007038 prediction 0.412533573979355 Functional Loss - HERC6 ENSG00000138642 CDS Human protein_coding chr4:89334241 chr4:89334244 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_93161 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:89334228-89334262
64251 chr17 42635789 42635789 1 + C T UCEC 42635787 + 42635767 42635807 41 ACAGGAGGAGACGCGTTTCGCGCGCCTCTGGATCCTCACCT ACAGGAGGAGACGCGTTTCGCGTGCCTCTGGATCCTCACCT < 41bp 0.807736924238519 0.601470642995958 0.3561892 0.32961178 prediction 0.412532562485124 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42635787 chr17:42635789 nonsynonymous SNV 0.992 5 23 hm5C_associated_SNPs_93162 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42635763-42635801
64251 chr10 99512851 99512851 1 + C T GBM 99512848 + 99512828 99512868 41 GATGAGCTGGCCCTGCAGGACAACGGGTTCCTGAGCAAGAA GATGAGCTGGCCCTGCAGGACAATGGGTTCCTGAGCAAGAA < 41bp 0.720672571422056 0.514407724273341 0.6352003 0.6865603 prediction 0.412529694297429 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99512848 chr10:99512851 synonymous SNV . 0 24 hm5C_associated_SNPs_93163 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585675 chr10:99512828-99512866
64251 chr19 34942995 34942995 1 + G A PRAD 34942992 + 34942972 34943012 41 CGTCTTTTTTCAAAGAGCATCGAGACTTTGAGAGTTCATTT CGTCTTTTTTCAAAGAGCATCGAAACTTTGAGAGTTCATTT < 41bp 0.706262158630934 0.468528194634386 0.33604544 0.29533923 prediction 0.412524317261869 Functional Loss - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34942992 chr19:34942995 synonymous SNV . 0 24 hm5C_associated_SNPs_93167 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:34942973-34943003
64251 chr1 154209563 154209563 1 + C T UCEC 154209560 + 154209540 154209580 41 GATGATAACTATGGCAATAGCAGCGGCAATACGTGGAACAA GATGATAACTATGGCAATAGCAGTGGCAATACGTGGAACAA < 41bp 0.764081898880037 0.557820810416129 0.81321895 0.70959425 prediction 0.412522176927815 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154209560 chr1:154209563 synonymous SNV . 0 24 hm5C_associated_SNPs_93168 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154209520-154209602
64251 chrX 51644751 51644751 1 + G A THCA 51644748 + 51644728 51644768 41 CTGCAGCTGAGGCCGAAGCCCGGGCTGAAGCAAGAACCCGC CTGCAGCTGAGGCCGAAGCCCGGACTGAAGCAAGAACCCGC < 41bp 0.802281863108439 0.596025326667015 0.7636138 0.43075275 prediction 0.412513072882849 Functional Loss - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51644748 chrX:51644751 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93171 0 0 5 PPIG POSTAR2 ENCODE chrX:51644702-51644764
64251 chr16 28962525 28962525 1 + C T DLBC 28962523 + 28962503 28962543 41 AATTCTGGAGGTCGCCACCGCTCGCGGTGCCGCGGACGAGG AATTCTGGAGGTCGCCACCGCTTGCGGTGCCGCGGACGAGG < 41bp 0.706255051183063 0.453570543334805 0.3305785 0.429635 prediction 0.412510102366126 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28962523 chr16:28962525 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_93172 0 0 5 SRSF1 POSTAR2 ENCODE chr16:28962495-28962604
64251 chr9 5745968 5745968 1 + G T SARC 5745966 + 5745946 5745986 41 GGCTATCACCTATGGGTAATCAGCGGATTTGGTTCTCAAAA GGCTATCACCTATGGGTAATCATCGGATTTGGTTCTCAAAA < 41bp 0.706253710490074 0.353297184322872 0.8851936 0.18403691 prediction 0.412507420980149 Functional Loss - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5745966 chr9:5745968 nonsynonymous SNV 0.008 0 23 hm5C_associated_SNPs_93174 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:5745941-5745973
64251 chr2 37319369 37319369 1 + C T LGG 37319366 + 37319346 37319386 41 AAGGAGATCTCAGAAGAAGCCAGCGAGCCTGTCAACAACTG AAGGAGATCTCAGAAGAAGCCAGTGAGCCTGTCAACAACTG < 41bp 0.729571018826086 0.523321514311575 0.63701093 0.75872856 prediction 0.412499009029023 Functional Loss - GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37319366 chr2:37319369 stopgain 1.000 1 24 hm5C_associated_SNPs_93176 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:37319338-37319374
64251 chr4 83840788 83840788 1 + A C rs148051973 83840784 + 83840764 83840804 41 TATTACTTTTGAATAATAGGCTGGACACTTAGTTTGACTTG TATTACTTTTGAATAATAGGCTGGCCACTTAGTTTGACTTG < 41bp 0.706243604654854 0.380023017021135 0.14628336 0.18401235 prediction 0.412487209309708 Functional Loss - THAP9 ENSG00000168152 UTR3 Human protein_coding chr4:83840784 chr4:83840788 . . 0 25 hm5C_associated_SNPs_93179 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr4:83840774-83840795
64251 chr19 44681808 44681808 1 + A T STAD 44681804 + 44681784 44681824 41 AGAACATCAGAGAATCCACACAGGAAAAAAAATCTATAAAA AGAACATCAGAGAATCCACACAGGTAAAAAAATCTATAAAA < 41bp 0.706242365405766 0.423265323068051 0.5451916 0.8431421 prediction 0.412484730811532 Functional Loss - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681804 chr19:44681808 nonsynonymous SNV 0.062 1 25 hm5C_associated_SNPs_93182 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44681777-44681809
64251 chr2 133403085 133403085 1 - C G rs61757692 133403089 - 133403069 133403109 41 AGTGACTCGAGACTCAATGACTGGGACTTAGACTGGGGCTC AGTGACTCGAGACTCAATGACTGGCACTTAGACTGGGGCTC < 41bp 0.861362072100745 0.655120522951353 0.38829595 0.15772063 prediction 0.412483098298785 Functional Loss - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133403089 chr2:133403085 nonsynonymous SNV 0.026 0 25 hm5C_associated_SNPs_93183 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:133403076-133403101
64251 chr16 21968870 21968870 1 + C T UCEC 21968867 + 21968847 21968887 41 ATTTAGGAACCACCCATTTGCTGCGTCTTACATCCAGTCTG ATTTAGGAACCACCCATTTGCTGTGTCTTACATCCAGTCTG < 41bp 0.706241260116411 0.49938219443987 0.07540935 0.08368823 prediction 0.412482520232822 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21968867 chr16:21968870 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_93184 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:21968774-21968870
64251 chr5 68805301 68805301 1 + C T GBM 68805298 + 68805278 68805318 41 GGCTATGGTTATGGCTATGGCTACGGAGGCTATACAGACCC GGCTATGGTTATGGCTATGGCTATGGAGGCTATACAGACCC < 41bp 0.760538733874147 0.554298078596647 0.08762917 0.1264022 prediction 0.412481310554999 Functional Loss - OCLN ENSG00000197822 CDS Human protein_coding chr5:68805298 chr5:68805301 synonymous SNV . 0 24 hm5C_associated_SNPs_93185 1 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:68805291-68805314
64251 chr1 84702525 84702525 1 + C T rs41301196 84702523 + 84702503 84702543 41 TGACCTACCTTAAAACAACACACGAGAAGAGTTAAACTGGG TGACCTACCTTAAAACAACACATGAGAAGAGTTAAACTGGG < 41bp 0.706238538354025 0.461423922044406 0.05715269 0.07773024 prediction 0.41247707670805 Functional Loss - PRKACB ENSG00000142875 UTR3 Human protein_coding chr1:84702523 chr1:84702525 . . 0 23 hm5C_associated_SNPs_93186 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714641 chr1:84702428-84702632
64251 chr1 11082376 11082376 1 + G A HNSC 11082373 + 11082353 11082393 41 GAGCTGGTTTGGGAAACAATCAAGGTAGTAATATGGGTGGT GAGCTGGTTTGGGAAACAATCAAAGTAGTAATATGGGTGGT < 41bp 0.774682843880363 0.568445566920186 0.89296687 0.869575 prediction 0.412474553920354 Functional Loss - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11082373 chr1:11082376 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_93187 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11082178-11082508
64251 chr10 76788500 76788500 1 + G A LUAD 76788497 + 76788477 76788517 41 AAAACCAGCCCCAGTCCCATCAGGATTGAGGAGGAGGTCAA AAAACCAGCCCCAGTCCCATCAGAATTGAGGAGGAGGTCAA < 41bp 0.760704190261456 0.554467203438534 0.70810413 0.32882732 prediction 0.412473973645845 Functional Loss - KAT6B ENSG00000156650 CDS Human protein_coding chr10:76788497 chr10:76788500 synonymous SNV . 0 24 hm5C_associated_SNPs_93188 0 0 1 UCHL5 POSTAR2 ENCODE chr10:76788490-76788544
64251 chr9 379854 379854 1 + C T STAD 379851 + 379831 379871 41 GCAAGGACCTGAGCAAGGACCAGCATGGGAGGAACTGCCTG GCAAGGACCTGAGCAAGGACCAGTATGGGAGGAACTGCCTG < 41bp 0.736909679416468 0.530680738913207 0.083162636 0.11267769 prediction 0.412457881006524 Functional Loss - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:379851 chr9:379854 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_93194 0 0 2 FXR2 POSTAR2 ENCODE chr9:379823-379936
64251 chr4 100518317 100518317 1 + C T BRCA 100518314 + 100518294 100518334 41 GAAACTTCCTGGCCTTCATTCAGCACCTCAGGACTGCGAAG GAAACTTCCTGGCCTTCATTCAGTACCTCAGGACTGCGAAG < 41bp 0.706226190933087 0.484030220497841 0.74062514 0.4287337 prediction 0.412452381866173 Functional Loss - MTTP ENSG00000138823 CDS Human protein_coding chr4:100518314 chr4:100518317 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93198 0 0 2 SND1 POSTAR2 ENCODE chr4:100518271-100518347
64251 chr19 1220416 1220416 1 + A C LUAD 1220415 + 1220395 1220435 41 GCCTGGAGTACCTGCATAGCCAGGGCATTGTGCACAAGGAC GCCTGGAGTACCTGCATAGCCCGGGCATTGTGCACAAGGAC < 41bp 0.843582184468558 0.63735635244589 0.85097754 0.3620584 prediction 0.412451664045337 Functional Loss - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220415 chr19:1220416 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_93199 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1220381-1220427
64251 chr20 61472120 61472120 1 + G A rs1048109 61472117 + 61472097 61472137 41 GGAAGCAAGTGACAAGGACGCCCGAAGCACAGTGGACGGTC GGAAGCAAGTGACAAGGACGCCCAAAGCACAGTGGACGGTC < 41bp 0.806060073038797 0.599838154596274 0.4616602 0.2725749 prediction 0.412443836885044 Functional Loss - COL9A3 ENSG00000092758 UTR3 Human protein_coding chr20:61472117 chr20:61472120 . . 0 24 hm5C_associated_SNPs_93202 0 0 2 GRWD1 POSTAR2 ENCODE chr20:61472086-61472128
64251 chr5 145609455 145609455 1 + G T UCEC 145609452 + 145609432 145609472 41 GTAGGGGGCGCAGCAAAGACCGGGATCCAAATAGGAATGTT GTAGGGGGCGCAGCAAAGACCGGTATCCAAATAGGAATGTT < 41bp 0.933955034612544 0.72773351777064 0.81419235 0.2314983 prediction 0.412443033683808 Functional Loss - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145609452 chr5:145609455 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_93204 0 0 9 DDX24 POSTAR2 ENCODE chr5:145609279-145609455
64251 chr12 79842860 79842860 1 + C T LUAD 79842857 + 79842837 79842877 41 CTATTGCCCAGTGGCACACCCTGCAGGTAGAGGAGGAAGTT CTATTGCCCAGTGGCACACCCTGTAGGTAGAGGAGGAAGTT < 41bp 0.712253371042602 0.506032940731249 0.35590082 0.26306477 prediction 0.412440860622705 Functional Loss - SYT1 ENSG00000067715 CDS Human protein_coding chr12:79842857 chr12:79842860 stopgain 0.980 1 24 hm5C_associated_SNPs_93206 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr12:79842840-79842860
64251 chr19 19790091 19790091 1 + G T SARC 19790088 + 19790068 19790108 41 CCTGAACAAGAAAAGTCAAACTGGAGTGAAACCATGCAAAT CCTGAACAAGAAAAGTCAAACTGTAGTGAAACCATGCAAAT < 41bp 0.85289452984316 0.646675594934671 0.273417 0.056293905 prediction 0.412437869816979 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790088 chr19:19790091 nonsynonymous SNV 0.010 2 24 hm5C_associated_SNPs_93207 0 0 1 SF3B1 POSTAR2 ENCODE chr19:19790065-19790096
64251 chr17 78220002 78220002 1 + G A LIHC 78219999 + 78219979 78220019 41 TGTGCACCCCGGCGGGGGGCCTGGTGACGGGTAAGGCCCCC TGTGCACCCCGGCGGGGGGCCTGATGACGGGTAAGGCCCCC < 41bp 0.814313821524973 0.608098059197454 0.83222824 0.40476274 prediction 0.412431524655038 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78219999 chr17:78220002 nonsynonymous SNV 0.888 1 24 hm5C_associated_SNPs_93211 0 0 1 PPIG POSTAR2 ENCODE chr17:78219951-78220003
64251 chr5 118862895 118862895 1 + G T COAD 118862893 + 118862873 118862913 41 GAGATGTGGAAGGAAGGAAACAGAATTCATTTTCAAACCAA GAGATGTGGAAGGAAGGAAACATAATTCATTTTCAAACCAA < 41bp 0.706212683891308 0.387897652469228 0.2638632 0.30822176 prediction 0.412425367782615 Functional Loss - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118862893 chr5:118862895 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_93214 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:118862864-118862912
64251 chrX 106888416 106888416 1 + C T LUSC 106888413 + 106888393 106888433 41 GCTCTGTTTTGCAGAGTGACCTCCATTGCAGACAGGCTGAA GCTCTGTTTTGCAGAGTGACCTCTATTGCAGACAGGCTGAA < 41bp 0.78792451519717 0.581716656744985 0.94287956 0.51773673 prediction 0.412415716904371 Functional Loss - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106888413 chrX:106888416 synonymous SNV . 0 24 hm5C_associated_SNPs_93217 0 0 1 SF3B4 POSTAR2 ENCODE chrX:106888354-106888416
64251 chr19 52793730 52793730 1 + G A UCEC 52793727 + 52793707 52793747 41 TAAAACCGTCAGGGACAAGTCAGGCCTCGCAGAACATTGGA TAAAACCGTCAGGGACAAGTCAGACCTCGCAGAACATTGGA < 41bp 0.706202105238771 0.466806752350919 0.57694787 0.31336278 prediction 0.412404210477542 Functional Loss - ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52793727 chr19:52793730 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_93222 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:52793712-52793734
64251 chrX 153660741 153660741 1 + C T COAD 153660738 + 153660718 153660758 41 TGCATGTGGACCTGGCCACCCTGCGGGAGCTGAAGCTCAAT TGCATGTGGACCTGGCCACCCTGTGGGAGCTGAAGCTCAAT < 41bp 0.706199870531573 0.494324509556506 0.48579487 0.39652684 prediction 0.412399741063145 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153660738 chrX:153660741 nonsynonymous SNV 0.654 2 24 hm5C_associated_SNPs_93223 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153660719-153660782
64251 chr3 47284703 47284703 1 + G T GBM 47284699 + 47284679 47284719 41 TAATCCAAGTCCTTCCCATTCACAGGGCTGCTGGCACCTTC TAATCCAAGTCCTTCCCATTCACATGGCTGCTGGCACCTTC < 41bp 0.755392669331819 0.549210287978961 0.027142137 0.0618245 prediction 0.412364762705715 Functional Loss - KIF9 ENSG00000088727 CDS Human protein_coding chr3:47284699 chr3:47284703 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_93236 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:47284687-47284711
64251 chr6 28254889 28254889 1 + G C LUAD 28254885 + 28254865 28254905 41 CCCCACGGATCAGCTCATCTCCAGGAAAAAAACCCCAGAGA CCCCACGGATCAGCTCATCTCCAGCAAAAAAACCCCAGAGA < 41bp 0.7061802377668 0.405577677017114 0.8174219 0.101968944 prediction 0.412360475533599 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28254885 chr6:28254889 nonsynonymous SNV 0.743 1 25 hm5C_associated_SNPs_93239 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:28254874-28254912
64251 chr1 45793225 45793225 1 + C T LIHC 45793223 + 45793203 45793243 41 TCAGCCTGACCTTGCTGGAGCGCGCTGGCTACCGCGGACCC TCAGCCTGACCTTGCTGGAGCGTGCTGGCTACCGCGGACCC < 41bp 0.799659484639282 0.593493913649646 0.33423653 0.23424175 prediction 0.412331141979272 Functional Loss - HPDL ENSG00000186603 CDS Human protein_coding chr1:45793223 chr1:45793225 synonymous SNV . 0 23 hm5C_associated_SNPs_93249 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:45793210-45793285
64251 chr20 34487510 34487510 1 + G T UCEC 34487508 + 34487488 34487528 41 TGTCCAAACCAGGGGCCCTTCAGCTTCAGACAAGCCCAGCC TGTCCAAACCAGGGGCCCTTCATCTTCAGACAAGCCCAGCC < 41bp 0.706151633482785 0.349910431432461 0.2679265 0.173403 prediction 0.412303266965571 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34487508 chr20:34487510 nonsynonymous SNV 0.957 1 23 hm5C_associated_SNPs_93254 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr20:34487498-34487519
64251 chr12 57894287 57894287 1 + C T SKCM 57894284 + 57894264 57894304 41 TGTGACAAGTGTGGCAAGCTCATCAATGCTGTCGAGCTTAA TGTGACAAGTGTGGCAAGCTCATTAATGCTGTCGAGCTTAA < 41bp 0.706151426801836 0.48257923690686 0.10372567 0.13159347 prediction 0.412302853603672 Functional Loss - MARS ENSG00000166986 CDS Human protein_coding chr12:57894284 chr12:57894287 synonymous SNV . 0 24 hm5C_associated_SNPs_93255 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:57894277-57894305
64251 chr20 30363784 30363784 1 + T C UCEC 30363783 + 30363763 30363803 41 ATTCAAGAAACTTGCTCTGGCTGGAATAGGTGAGCTTGGCT ATTCAAGAAACTTGCTCTGGCCGGAATAGGTGAGCTTGGCT < 41bp 0.816232598120898 0.610081759949082 0.13504675 0.37554243 prediction 0.412301676343632 Functional Loss - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30363783 chr20:30363784 synonymous SNV . 0 22 hm5C_associated_SNPs_93256 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:30363718-30363786
64251 chr17 76067190 76067190 1 + G A SKCM 76067187 + 76067167 76067207 41 GCATGAAGACGTCTGGCAAGCAGGATGAGGCCTGGATCATG GCATGAAGACGTCTGGCAAGCAGAATGAGGCCTGGATCATG < 41bp 0.811995314964741 0.605844987748107 0.85187566 0.63094676 prediction 0.412300654433267 Functional Loss - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76067187 chr17:76067190 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_93257 0 0 2 PPIG POSTAR2 ENCODE chr17:76067170-76067260
64251 chr6 56919119 56919119 1 + G A UCEC 56919116 + 56919096 56919136 41 CTCTTCCTAGGAGTATATTACTAGACAATATAATTCAGCAC CTCTTCCTAGGAGTATATTACTAAACAATATAATTCAGCAC < 41bp 0.767576008997205 0.561430629783158 0.082853645 0.10603729 prediction 0.412290758428094 Functional Loss - KIAA1586 ENSG00000168116 CDS Human protein_coding chr6:56919116 chr6:56919119 nonsynonymous SNV 0.958 0 24 hm5C_associated_SNPs_93262 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:56919079-56919127
64251 chr8 6615973 6615973 1 + C T rs2911970 6615971 + 6615951 6615991 41 GTGCTGCTCAGCGGCTTGCACGCAGACTTGCTAGGAAGAAA GTGCTGCTCAGCGGCTTGCACGTAGACTTGCTAGGAAGAAA < 41bp 0.706137618301094 0.470169369355395 0.28393847 0.39813966 prediction 0.412275236602187 Functional Loss - AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6615971 chr8:6615973 . . 0 23 hm5C_associated_SNPs_93268 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704216 chr8:6615962-6615983
64251 chr10 103908158 103908158 1 + G A UCEC 103908155 + 103908135 103908175 41 CTGTAGTTCCTCTGGACGTTCTCGAAGATGCTCTTCCTCTT CTGTAGTTCCTCTGGACGTTCTCAAAGATGCTCTTCCTCTT < 41bp 0.821667611967252 0.615534652580065 0.42387003 0.3723244 prediction 0.412265918774374 Functional Loss - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908155 chr10:103908158 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_93270 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr10:103908140-103908160
64251 chr16 67578714 67578714 1 + G A LGG 67578711 + 67578691 67578731 41 TTCAGCAGGCGGTGGGAGATCCCGGCCAGCTCTGCCCAGGA TTCAGCAGGCGGTGGGAGATCCCAGCCAGCTCTGCCCAGGA < 41bp 0.706132079014231 0.451864790921509 0.8456067 0.69549924 prediction 0.412264158028463 Functional Loss - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578711 chr16:67578714 synonymous SNV . 0 24 hm5C_associated_SNPs_93271 0 0 1 PPIG POSTAR2 ENCODE chr16:67578663-67578726
64251 chr20 34129923 34129923 1 + G T LUAD 34129921 + 34129901 34129941 41 GACTTCCGGGTCAAGACCTGCGGGGGCGCCACCGGTAGGCC GACTTCCGGGTCAAGACCTGCGTGGGCGCCACCGGTAGGCC < 41bp 0.921405979759305 0.715275265679048 0.9316968 0.83827245 prediction 0.412261428160514 Functional Loss - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34129921 chr20:34129923 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_93273 0 0 8 DDX3X POSTAR2 ENCODE chr20:34129885-34129937
64251 chr5 137518143 137518143 1 + G A UCEC 137518140 + 137518120 137518160 41 ACTAACTCAGGGAAAACCCACACGATTCAAGGTGAGTAGTA ACTAACTCAGGGAAAACCCACACAATTCAAGGTGAGTAGTA < 41bp 0.798266885739293 0.592137239220125 0.18700305 0.04275918 prediction 0.412259293038336 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137518140 chr5:137518143 synonymous SNV . 0 24 hm5C_associated_SNPs_93274 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:137518122-137518143
64251 chr7 6193600 6193600 1 + C T rs558287537 6193597 + 6193577 6193617 41 CCCGAGGAGCCTCCGCCCAGCGCCGGCGAGGACATCGTGGG CCCGAGGAGCCTCCGCCCAGCGCTGGCGAGGACATCGTGGG < 41bp 0.735213956462386 0.529084594978473 0.32208145 0.25216326 prediction 0.412258722967825 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193597 chr7:6193600 synonymous SNV . 0 24 hm5C_associated_SNPs_93277 0 0 1 FXR2 POSTAR2 ENCODE chr7:6193547-6193618
64251 chr19 30313167 30313167 1 + G T LIHC 30313165 + 30313145 30313185 41 AGCTGTTGGATCTCTGTGTCCTGGATGTTGACTGCCTTGAA AGCTGTTGGATCTCTGTGTCCTTGATGTTGACTGCCTTGAA < 41bp 0.910874327366679 0.704746914724054 0.25477493 0.040702105 prediction 0.41225482528525 Functional Loss - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313165 chr19:30313167 synonymous SNV . 0 23 hm5C_associated_SNPs_93279 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:30313144-30313168
64251 chrX 47060384 47060384 1 + C T UCEC 47060382 + 47060362 47060402 41 ATCAAGCTGGTGGTGGCAGACACGCGGGGCCTGTTTGGGTG ATCAAGCTGGTGGTGGCAGACATGCGGGGCCTGTTTGGGTG < 41bp 0.856835518760384 0.650709600185441 0.29549468 0.3897128 prediction 0.412251837149887 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47060382 chrX:47060384 nonsynonymous SNV 0.831 4 23 hm5C_associated_SNPs_93280 0 0 4 EFTUD2 POSTAR2 ENCODE chrX:47060360-47060414
64251 chr12 132237750 132237750 1 + C T rs1051219 132237747 + 132237727 132237767 41 GCGCCGCCCCCTCCCGGAATCGACGTGACTACTTACTACAG GCGCCGCCCCCTCCCGGAATCGATGTGACTACTTACTACAG < 41bp 0.70612580588908 0.490648301329139 0.8191241 0.14256075 prediction 0.412251611778159 Functional Loss - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132237747 chr12:132237750 synonymous SNV . 0 24 hm5C_associated_SNPs_93281 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr12:132237718-132237751
64251 chr19 1254228 1254228 1 + G A LIHC 1254225 + 1254205 1254245 41 GCCTTGCGTGTGGGCGACCACATGATGTTCGTGCAGCTGCA GCCTTGCGTGTGGGCGACCACATAATGTTCGTGCAGCTGCA < 41bp 0.813854989183449 0.607734350095138 0.52307767 0.2639999 prediction 0.412241278176622 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254225 chr19:1254228 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_93286 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:1254220-1254240
64251 chr20 1106274 1106274 1 + G T COAD 1106272 + 1106252 1106292 41 AAAGCCATCACCGTGGAGAGCAGCATGATCCTCAATGTGCT AAAGCCATCACCGTGGAGAGCATCATGATCCTCAATGTGCT < 41bp 0.706117020277771 0.34856063471801 0.36616528 0.088799685 prediction 0.412234040555542 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1106272 chr20:1106274 nonsynonymous SNV 0.985 3 23 hm5C_associated_SNPs_93289 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:1106244-1106285
64251 chr17 7318372 7318372 1 + G A SKCM 7318369 + 7318349 7318389 41 TACACGCGGCTGCTGGCAGCCAAGGTGGGCTGTGACCGAGA TACACGCGGCTGCTGGCAGCCAAAGTGGGCTGTGACCGAGA < 41bp 0.706113344168653 0.456989708104198 0.4925391 0.57692564 prediction 0.412226688337306 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318369 chr17:7318372 synonymous SNV . 0 24 hm5C_associated_SNPs_93293 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7318348-7318386
64251 chr12 124228470 124228470 1 + G T GBM 124228466 + 124228446 124228486 41 GCTTATGGAGTCGGAAGCTACAGAGAAGTCAATCCAGGTTG GCTTATGGAGTCGGAAGCTACAGATAAGTCAATCCAGGTTG < 41bp 0.717262214998165 0.511151035033085 0.5689799 0.10620645 prediction 0.41222235993016 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124228466 chr12:124228470 stopgain 0.982 1 25 hm5C_associated_SNPs_93294 0 0 1 PRPF8 POSTAR2 ENCODE chr12:124228460-124228527
64251 chr9 36657333 36657333 1 + A C TGCT 36657332 + 36657312 36657352 41 GTGTGAAGATGATTTATCAACAGGTGCTGCTACTCCCCGAA GTGTGAAGATGATTTATCAACCGGTGCTGCTACTCCCCGAA < 41bp 0.706108442457872 0.458975574718 0.91258293 0.75546783 prediction 0.412216884915743 Functional Loss - MELK ENSG00000165304 CDS Human protein_coding chr9:36657332 chr9:36657333 synonymous SNV . 0 22 hm5C_associated_SNPs_93296 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36657279-36657360
64251 chr2 216211649 216211649 1 + T C rs140711402 216211648 + 216211628 216211668 41 TGCCATCGATCAATATGTGACTGGAACCATTGGCGAGGTGA TGCCATCGATCAATATGTGACCGGAACCATTGGCGAGGTGA < 41bp 0.706103201573878 0.450442755256118 0.2578709 0.3517214 prediction 0.412206403147755 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216211648 chr2:216211649 synonymous SNV . 0 22 hm5C_associated_SNPs_93299 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:216211593-216211662
64251 chr2 216211651 216211651 1 + G A UCEC 216211648 + 216211628 216211668 41 TGCCATCGATCAATATGTGACTGGAACCATTGGCGAGGTGA TGCCATCGATCAATATGTGACTGAAACCATTGGCGAGGTGA < 41bp 0.706103201573878 0.476571453609863 0.2578709 0.13225085 prediction 0.412206403147755 Functional Loss - ATIC ENSG00000138363 CDS Human protein_coding chr2:216211648 chr2:216211651 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_93300 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:216211593-216211662
64251 chr1 41232621 41232621 1 + G A COAD 41232618 + 41232598 41232638 41 AAATGCAAGTCAGGGGAAGCCTCGAAGGTGCCTGAAAGAAA AAATGCAAGTCAGGGGAAGCCTCAAAGGTGCCTGAAAGAAA < 41bp 0.776287755499931 0.57018608672638 0.9161002 0.8974656 prediction 0.412203337547103 Functional Loss - NFYC ENSG00000066136 CDS Human protein_coding chr1:41232618 chr1:41232621 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_93303 0 0 2 PRPF8 POSTAR2 ENCODE chr1:41232618-41232682
64251 chr7 148910867 148910867 1 + G A UCEC 148910864 + 148910844 148910884 41 AGCCATACCCATGGGGACCACGCGACTCAATGGACGGAGAG AGCCATACCCATGGGGACCACGCAACTCAATGGACGGAGAG < 41bp 0.810195322045329 0.604094165542659 0.5164087 0.42013016 prediction 0.41220231300534 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148910864 chr7:148910867 nonsynonymous SNV 0.986 2 24 hm5C_associated_SNPs_93304 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:148910860-148910879
64251 chr22 41924576 41924576 1 - G A UCEC 41924579 - 41924559 41924599 41 CATTCTGTTGAGGGCACTGCCAGCGCGGAACCACTCAATCT CATTCTGTTGAGGGCACTGCCAGTGCGGAACCACTCAATCT < 41bp 0.71522160637571 0.509121047605974 0.7649728 0.62797916 prediction 0.412201117539472 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41924579 chr22:41924576 nonsynonymous SNV 0.966 3 24 hm5C_associated_SNPs_93305 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:41924550-41924592
64251 chr15 49611987 49611987 1 + T C UCEC 49611986 + 49611966 49612006 41 GCTGCCCCGAGCTGGATCAGCTGGTGGACATCTGTCGGTGA GCTGCCCCGAGCTGGATCAGCCGGTGGACATCTGTCGGTGA < 41bp 0.806889813949859 0.600790573531452 0.7308723 0.8117616 prediction 0.412198480836814 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49611986 chr15:49611987 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_93308 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr15:49611952-49611989
64251 chr15 83499455 83499455 1 + G A UCEC 83499452 + 83499432 83499472 41 ATGTGCTTGCCAGCTTCCCACGCGGTGTCAGTAATTCACCC ATGTGCTTGCCAGCTTCCCACGCAGTGTCAGTAATTCACCC < 41bp 0.828866411519085 0.622776465514844 0.30975938 0.06310943 prediction 0.412179892008482 Functional Loss - WHAMM ENSG00000156232 CDS Human protein_coding chr15:83499452 chr15:83499455 synonymous SNV . 0 24 hm5C_associated_SNPs_93310 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:83499421-83499462
64251 chr2 176988675 176988675 1 + G A UCEC 176988672 + 176988652 176988692 41 CTCTTTGTAGACAACCCCGCCGCGAACTGGATCCACGCTCG CTCTTTGTAGACAACCCCGCCGCAAACTGGATCCACGCTCG < 41bp 0.809656918188021 0.603568091519926 0.36408177 0.10806593 prediction 0.412177653336192 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988672 chr2:176988675 synonymous SNV . 0 24 hm5C_associated_SNPs_93313 0 0 9 U2AF2 POSTAR2 GSE83923,CSM2221660 chr2:176988660-176988680
64251 chr11 607297 607297 1 + G A BLCA 607294 + 607274 607314 41 AGCCCCTGGGGCGGTTCAGGCTCGGAACTTGTCAAATGGGA AGCCCCTGGGGCGGTTCAGGCTCAGAACTTGTCAAATGGGA < 41bp 0.706086349596575 0.455845535016199 0.28438157 0.21957403 prediction 0.412172699193151 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607294 chr11:607297 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_93314 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:607262-607298
64251 chr19 50149800 50149800 1 + G A rs56918620 50149797 + 50149777 50149817 41 TTCCAGGTGTTGGACATGGCCACGGACAGCTTCCTCGCAGG TTCCAGGTGTTGGACATGGCCACAGACAGCTTCCTCGCAGG < 41bp 0.82341562899424 0.617340366055033 0.8428111 0.47178528 prediction 0.412150525878414 Functional Loss - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50149797 chr19:50149800 nonsynonymous SNV 0.967 0 24 hm5C_associated_SNPs_93322 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50149792-50149817
64251 chr2 120439130 120439130 1 + G T READ 120439126 + 120439106 120439146 41 CCGTGGAGTCCTGGCTGGACCGCCGCACGGCCTCCCTCTCT CCGTGGAGTCCTGGCTGGACCGCCTCACGGCCTCCCTCTCT < 41bp 0.733235280673747 0.52716788919167 0.19002166 0.038193166 prediction 0.412134782964153 Functional Loss - TMEM177 ENSG00000144120 CDS Human protein_coding chr2:120439126 chr2:120439130 nonsynonymous SNV 0.984 2 25 hm5C_associated_SNPs_93330 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:120439120-120439140
64251 chr17 18145297 18145297 1 + G A BLCA 18145294 + 18145274 18145314 41 CTCTGGACATTAACTGGCCCCGCGATGCCACCCAGGCCAGG CTCTGGACATTAACTGGCCCCGCAATGCCACCCAGGCCAGG < 41bp 0.823052233067241 0.61698554670756 0.035872072 0.022135377 prediction 0.412133372719361 Functional Loss - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18145294 chr17:18145297 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_93331 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:18145257-18145297
64251 chr16 3340115 3340115 1 + G A UCEC 3340112 + 3340092 3340132 41 GGAGTTCACACCTCGTCATTCACGAAAGAACTCATGAGAGA GGAGTTCACACCTCGTCATTCACAAAAGAACTCATGAGAGA < 41bp 0.813114251308441 0.607048870847713 0.15287346 0.080919445 prediction 0.412130760921457 Functional Loss - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3340112 chr16:3340115 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_93332 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3340059-3340119
64251 chr1 156348149 156348149 1 + G T THYM 156348145 + 156348125 156348165 41 CCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTAC CCCAGCTGGAGAAGAGCAAGCACCTCCAGGGCTCCGTCTAC < 41bp 0.713170457271094 0.507106182291616 0.027869552 0.04356724 prediction 0.412128549958956 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348145 chr1:156348149 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_93333 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156348100-156348182
64251 chr20 36032809 36032809 1 + C T rs74327149 36032807 + 36032787 36032827 41 CTATGAAAGGGAGCGAGCCCCTCGGCTCTGGAGGCAATCAA CTATGAAAGGGAGCGAGCCCCTTGGCTCTGGAGGCAATCAA < 41bp 0.796726036762147 0.590661882811761 0.22399032 0.112003386 prediction 0.412128307900771 Functional Loss - SRC ENSG00000197122 UTR3 Human protein_coding chr20:36032807 chr20:36032809 . . 0 23 hm5C_associated_SNPs_93334 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:36032803-36032828
64251 chr19 6751205 6751205 1 + C T ESCA 6751202 + 6751182 6751222 41 GCTACGTGCCCACCTCCTACCTCCGAGTCACGCTCAATTGA GCTACGTGCCCACCTCCTACCTCTGAGTCACGCTCAATTGA < 41bp 0.706063085220767 0.485728270261717 0.55782026 0.2880572 prediction 0.412126170441534 Functional Loss - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751202 chr19:6751205 stopgain 0.997 0 24 hm5C_associated_SNPs_93336 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6751178-6751217
64251 chr16 28967541 28967541 1 + A T ESCA 28967539 + 28967519 28967559 41 AGCCACCTCAGGGTCAAGAGCAACAGGGCCAAGAGGATGAA AGCCACCTCAGGGTCAAGAGCATCAGGGCCAAGAGGATGAA < 41bp 0.708051721029181 0.50199064286529 0.2900864 0.13618973 prediction 0.412122156327782 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28967539 chr16:28967541 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_93339 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:28967503-28967541
64251 chr22 50279840 50279840 1 + C T GBM 50279837 + 50279817 50279857 41 TCAGCGAGGCCATTAAGAGCCAGCGGATGGTGCAGAACCTG TCAGCGAGGCCATTAAGAGCCAGTGGATGGTGCAGAACCTG < 41bp 0.707662150428699 0.501602036588215 0.8569615 0.7164988 prediction 0.412120227680969 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279837 chr22:50279840 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_93341 0 0 1 FXR2 POSTAR2 ENCODE chr22:50279831-50279885
64251 chr13 42763196 42763196 1 + G A UCEC 42763193 + 42763173 42763213 41 GTTCAGTCCTAAACGAGAAGCTCGAACAACTGCTGCAGGCT GTTCAGTCCTAAACGAGAAGCTCAAACAACTGCTGCAGGCT < 41bp 0.706036772379404 0.468854488917134 0.8380822 0.89469755 prediction 0.412073544758808 Functional Loss - DGKH ENSG00000102780 CDS Human protein_coding chr13:42763193 chr13:42763196 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_93351 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:42763190-42763224
64251 chr19 33696301 33696301 1 + G T UCEC 33696299 + 33696279 33696319 41 GGCGCCCGCCTCCGAGCCTCCAGGCAGCCTGTGCCCCGGGG GGCGCCCGCCTCCGAGCCTCCATGCAGCCTGTGCCCCGGGG < 41bp 0.706036204367228 0.34208892722809 0.6547337 0.25176328 prediction 0.412072408734456 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696299 chr19:33696301 nonsynonymous SNV 0.623 2 23 hm5C_associated_SNPs_93353 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:33696286-33696316
64251 chr5 175795830 175795830 1 + C T STAD 175795827 + 175795807 175795847 41 CAGTTGGGGGCAGCCAGAACCTGCGCTTCTACTGGAAGGAG CAGTTGGGGGCAGCCAGAACCTGTGCTTCTACTGGAAGGAG < 41bp 0.759642135348494 0.553608852243061 0.21486005 0.14986613 prediction 0.412066566210866 Functional Loss - ARL10 ENSG00000175414 CDS Human protein_coding chr5:175795827 chr5:175795830 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_93356 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr5:175795819-175795844
64251 chr11 64807235 64807235 1 + C T rs495820 64807232 + 64807212 64807252 41 TGAAGCGGGCAGAGGAGATCCTGCGCCTGCACCTGTCTCAA TGAAGCGGGCAGAGGAGATCCTGTGCCTGCACCTGTCTCAA < 41bp 0.740758728054321 0.534727039488715 0.22117719 0.2581055 prediction 0.412063377131213 Functional Loss - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64807232 chr11:64807235 nonsynonymous SNV 0.004 1 24 hm5C_associated_SNPs_93358 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64807226-64807251
64251 chr6 117043381 117043381 1 + C T UCEC 117043378 + 117043358 117043398 41 TGTTGGGCCCTTTCTTATCTCTCCGATGGACCCAATGATAA TGTTGGGCCCTTTCTTATCTCTCTGATGGACCCAATGATAA < 41bp 0.791274573690661 0.58524329391783 0.2961629 0.12813455 prediction 0.412062559545661 Functional Loss - KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117043378 chr6:117043381 synonymous SNV . 0 24 hm5C_associated_SNPs_93359 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:117043359-117043382
64251 chr7 128489403 128489403 1 + G A READ 128489400 + 128489380 128489420 41 GGCAGGTGCCTGCCTGGGCCCTCGAATCCAGATTGGGCAGG GGCAGGTGCCTGCCTGGGCCCTCAAATCCAGATTGGGCAGG < 41bp 0.706027446535268 0.465444312147898 0.8978159 0.6121914 prediction 0.412054893070537 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128489400 chr7:128489403 nonsynonymous SNV 0.731 1 24 hm5C_associated_SNPs_93360 0 0 8 BUD13 POSTAR2 ENCODE chr7:128489377-128489418
64251 chr22 45996263 45996263 1 + G T LUAD 45996260 + 45996240 45996280 41 CTGGAGATGAACTATGTGGTCGGGGGCGTGGTCTCCCACCG CTGGAGATGAACTATGTGGTCGGTGGCGTGGTCTCCCACCG < 41bp 0.938097993116211 0.732076881213791 0.93424773 0.6479335 prediction 0.41204222380484 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45996260 chr22:45996263 synonymous SNV . 0 24 hm5C_associated_SNPs_93364 0 0 2 RPS3 POSTAR2 ENCODE chr22:45996257-45996268
64251 chr3 125647816 125647816 1 + A C rs35404079 125647812 + 125647792 125647832 41 CACTTGGTTCCTCACAAAGCCAAGACTGCTGCAGCTGCCAC CACTTGGTTCCTCACAAAGCCAAGCCTGCTGCAGCTGCCAC < 41bp 0.706015471617889 0.316700967773745 0.201018 0.19145146 prediction 0.412030943235778 Functional Loss - FAM86JP ENSG00000171084 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:125647812 chr3:125647816 . . 0 25 hm5C_associated_SNPs_93369 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:125647798-125647836
64251 chr11 57427100 57427100 1 + G A UCEC 57427097 + 57427077 57427117 41 GATCTTTGGCACAGAGCTGACCCGAAACAAGAAATTCACCT GATCTTTGGCACAGAGCTGACCCAAAACAAGAAATTCACCT < 41bp 0.706012163697964 0.484594247649332 0.24565646 0.36361483 prediction 0.412024327395927 Functional Loss - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57427097 chr11:57427100 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93372 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:57427054-57427102
64251 chr22 29177065 29177065 1 + T C UCEC 29177064 + 29177044 29177084 41 TGTTAGTGGCCTTTCCATACCTGGGATATTAGATGTTATTT TGTTAGTGGCCTTTCCATACCCGGGATATTAGATGTTATTT < 41bp 0.815043642682446 0.609031502690141 0.06370214 0.27650028 prediction 0.412024279984609 Functional Loss - CCDC117 ENSG00000159873 CDS Human protein_coding chr22:29177064 chr22:29177065 synonymous SNV . 0 22 hm5C_associated_SNPs_93373 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:29176951-29177078
64251 chr12 6647115 6647115 1 + T C BLCA 6647114 + 6647094 6647134 41 CCACTCCTCCACCTTTGACGCTGGGGCTGGCATTGCCCTCA CCACTCCTCCACCTTTGACGCCGGGGCTGGCATTGCCCTCA < 41bp 0.804417061191692 0.598410858718832 0.6947758 0.9238541 prediction 0.412012404945719 Functional Loss - GAPDH ENSG00000111640 CDS Human protein_coding chr12:6647114 chr12:6647115 synonymous SNV . 0 22 hm5C_associated_SNPs_93377 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:6646999-6647137
64251 chr11 65108447 65108447 1 + C T LUAD 65108444 + 65108424 65108464 41 CTTCCTGCCACAGGATTGGCCTCCGGACAGCTGTACTCCTA CTTCCTGCCACAGGATTGGCCTCTGGACAGCTGTACTCCTA < 41bp 0.706005980992901 0.479857598141302 0.27885544 0.120262295 prediction 0.412011961985803 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65108444 chr11:65108447 synonymous SNV . 0 24 hm5C_associated_SNPs_93378 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:65108437-65108484
64251 chr11 65108446 65108446 1 + C T SKCM 65108444 + 65108424 65108464 41 CTTCCTGCCACAGGATTGGCCTCCGGACAGCTGTACTCCTA CTTCCTGCCACAGGATTGGCCTTCGGACAGCTGTACTCCTA < 41bp 0.706005980992901 0.417139682504971 0.27885544 0.15000966 prediction 0.412011961985803 Functional Loss - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65108444 chr11:65108446 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_93379 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:65108437-65108484
64251 chr6 167709555 167709555 1 + T C SKCM 167709554 + 167709534 167709574 41 CCACCTCCATACTGCTGGGACTCGGGGCCGCCCCGCTGTGG CCACCTCCATACTGCTGGGACCCGGGGCCGCCCCGCTGTGG < 41bp 0.834574471415777 0.628577205988605 0.1777961 0.2334879 prediction 0.411994530854344 Functional Loss - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167709554 chr6:167709555 nonsynonymous SNV 0.021 4 22 hm5C_associated_SNPs_93383 0 0 3 BUD13 POSTAR2 ENCODE chr6:167709505-167709586
64251 chr10 75552596 75552596 1 + G A SARC 75552593 + 75552573 75552613 41 CTGGGCTGAAGCCACTGGAACAGGAGAGTCGCATGGAGGTG CTGGGCTGAAGCCACTGGAACAGAAGAGTCGCATGGAGGTG < 41bp 0.830066578643752 0.624070052844767 0.8525997 0.48706338 prediction 0.411993051597968 Functional Loss - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75552593 chr10:75552596 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_93385 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:75552580-75552603
64251 chr17 21731304 21731304 1 + G A HNSC 21731301 + 21731281 21731321 41 TCATCTTTGCAGGCAAGCAGCTGGAAGATGGCGGTACTCTT TCATCTTTGCAGGCAAGCAGCTGAAAGATGGCGGTACTCTT < 41bp 0.795739652498436 0.589754087533601 0.88447917 0.9171283 prediction 0.411971129929671 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731301 chr17:21731304 stopgain 0.991 0 24 hm5C_associated_SNPs_93396 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr6 54735357 54735357 1 + G A PRAD 54735354 + 54735334 54735374 41 CTGATGTGGAAGCTCCAAATCTTGACTTAGGCTGGCCATAT CTGATGTGGAAGCTCCAAATCTTAACTTAGGCTGGCCATAT < 41bp 0.801913332671405 0.595929874344419 0.31821632 0.26574248 prediction 0.411966916653971 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54735354 chr6:54735357 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93398 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr6:54735345-54735367
64251 chr19 17837520 17837520 1 + G T LUSC 17837517 + 17837497 17837537 41 GCACCCCGCCCGCCTGCCTCCTGGACGGCCTGGTCCGCCTG GCACCCCGCCCGCCTGCCTCCTGTACGGCCTGGTCCGCCTG < 41bp 0.936682814361223 0.730712374594613 0.3780452 0.024871677 prediction 0.41194087953322 Functional Loss - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837517 chr19:17837520 nonsynonymous SNV 0.035 2 24 hm5C_associated_SNPs_93404 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:17837468-17837537
64251 chr17 2265551 2265551 1 + G T SARC 2265548 + 2265528 2265568 41 TGGACAAGGTCGTGCAATACCTGGCGGAAAACTGCAGGTGA TGGACAAGGTCGTGCAATACCTGTCGGAAAACTGCAGGTGA < 41bp 0.705967246358693 0.318422456419767 0.5594198 0.1700325 prediction 0.411934492717386 Functional Loss - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2265548 chr17:2265551 nonsynonymous SNV 0.215 2 24 hm5C_associated_SNPs_93406 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:2265519-2265555
64251 chr1 36748214 36748214 1 + G A UCEC 36748211 + 36748191 36748231 41 TGGATCTCGCTCTTCTCGCTCAAGATCTGCATCAAGATCTC TGGATCTCGCTCTTCTCGCTCAAAATCTGCATCAAGATCTC < 41bp 0.705967235258985 0.459849434162013 0.43830225 0.22389352 prediction 0.41193447051797 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36748211 chr1:36748214 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93407 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:36748131-36748229
64251 chr19 54634882 54634882 1 + G A rs116685547 54634879 + 54634859 54634899 41 CCTGAATGACTGCGTGTGTCCAAGGTGGCTTCCCACTGAAG CCTGAATGACTGCGTGTGTCCAAAGTGGCTTCCCACTGAAG < 41bp 0.821093627862378 0.615126507257023 0.90543264 0.69491273 prediction 0.411934241210711 Functional Loss - PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634879 chr19:54634882 . . 0 24 hm5C_associated_SNPs_93408 1 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54634838-54634904
64251 chr1 19992455 19992455 1 + C T READ 19992453 + 19992433 19992473 41 TTCTTCCTGGTGTCGCTCTTCACGTCTGACCTGATGGTGGG TTCTTCCTGGTGTCGCTCTTCATGTCTGACCTGATGGTGGG < 41bp 0.705963234177049 0.454973483441548 0.17296514 0.28612462 prediction 0.411926468354097 Functional Loss - HTR6 ENSG00000158748 CDS Human protein_coding chr1:19992453 chr1:19992455 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_93409 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:19992453-19992483
64251 chr19 39421358 39421358 1 - G A LGG 39421360 - 39421340 39421380 41 CAAGATGGCTGCGTCCATGGCGCGGCGCTTGTGGCCTTTGC CAAGATGGCTGCGTCCATGGCGTGGCGCTTGTGGCCTTTGC < 41bp 0.705957485094841 0.484200660562669 0.88198143 0.8063363 prediction 0.411914970189682 Functional Loss - SARS2 ENSG00000104835 CDS Human protein_coding chr19:39421360 chr19:39421358 nonsynonymous SNV 0.441 3 23 hm5C_associated_SNPs_93415 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:39421324-39421362
64251 chr1 162531368 162531368 1 + T C rs548296037 162531367 + 162531347 162531387 41 TGGGCGGTCGGCTTCCACTCCTTCAGGCGTCGGCAGCCACT TGGGCGGTCGGCTTCCACTCCCTCAGGCGTCGGCAGCCACT < 41bp 0.764568172983293 0.558612349327146 0.16888857 0.06910998 prediction 0.411911647312294 Functional Loss - UAP1 ENSG00000117143 UTR5 Human protein_coding chr1:162531367 chr1:162531368 . . 0 22 hm5C_associated_SNPs_93419 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:162531348-162531372
64251 chr17 43246699 43246699 1 + C T STAD 43246696 + 43246676 43246716 41 AGCCAGAGGGCCTCCCGGGTCCGCGAAGAGATGTTCGCCAA AGCCAGAGGGCCTCCCGGGTCCGTGAAGAGATGTTCGCCAA < 41bp 0.719781428078438 0.513826049713885 0.41692853 0.30975223 prediction 0.411910756729106 Functional Loss - HEXIM2 ENSG00000168517 CDS Human protein_coding chr17:43246696 chr17:43246699 synonymous SNV . 0 24 hm5C_associated_SNPs_93420 0 0 1 DDX6 POSTAR2 ENCODE chr17:43246663-43246720
64251 chr6 30587563 30587563 1 + C T BRCA 30587560 + 30587540 30587580 41 ACAAGGGTGGTGTACCCCCACAGCGGACTCGGAAGACATGT ACAAGGGTGGTGTACCCCCACAGTGGACTCGGAAGACATGT < 41bp 0.720234858319327 0.51428048086614 0.102182746 0.098619044 prediction 0.411908754906373 Functional Loss - MRPS18B ENSG00000204568 CDS Human protein_coding chr6:30587560 chr6:30587563 nonsynonymous SNV 0.947 3 24 hm5C_associated_SNPs_93422 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:30587538-30587569
64251 chr14 29237372 29237372 1 + G T LUAD 29237370 + 29237350 29237390 41 GGTGCGCGCCTCACCTCCACCGGCCTCACCTTCATGGACCG GGTGCGCGCCTCACCTCCACCGTCCTCACCTTCATGGACCG < 41bp 0.705953048602013 0.350199410544699 0.34300503 0.052663505 prediction 0.411906097204026 Functional Loss - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237370 chr14:29237372 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_93424 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:29237353-29237379
64251 chr11 65272755 65272755 1 + G T HNSC 65272752 + 65272732 65272772 41 AAGCGCTATTATCCTAAGGTCAAGAGAAGTGTCAGCCTCAC AAGCGCTATTATCCTAAGGTCAATAGAAGTGTCAGCCTCAC < 41bp 0.705952338276907 0.405637098951229 0.8185395 0.34802735 prediction 0.411904676553813 Functional Loss - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65272752 chr11:65272755 . . 0 24 hm5C_associated_SNPs_93426 0 0 94 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65272720-65272760
64251 chr11 65161819 65161819 1 + C T rs138537245 65161816 + 65161796 65161836 41 TACCCGTGCGACGTGGAGGACTGCGAGGCTCTGGGCGCCCT TACCCGTGCGACGTGGAGGACTGTGAGGCTCTGGGCGCCCT < 41bp 0.750853855127416 0.544906409772389 0.7161056 0.73696 prediction 0.411894890710055 Functional Loss - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65161816 chr11:65161819 synonymous SNV . 0 24 hm5C_associated_SNPs_93430 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:65161800-65161820
64251 chr5 140864861 140864861 1 + G A SKCM 140864858 + 140864838 140864878 41 ACCCGGTCCCAGAGGAGTCACAGGAAGGGACTTTTGTAGGG ACCCGGTCCCAGAGGAGTCACAGAAAGGGACTTTTGTAGGG < 41bp 0.820169035145902 0.614223409479974 0.35798556 0.10505071 prediction 0.411891251331856 Functional Loss - PCDHGC4 ENSG00000242419 CDS Human protein_coding chr5:140864858 chr5:140864861 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_93431 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:140864858-140864888
64251 chr7 139229620 139229620 1 + G A rs79893044 139229617 + 139229597 139229637 41 GGCCAGCCCCGCCCCGGGCCCCAGAGGTCCCCTGCATCCCC GGCCAGCCCCGCCCCGGGCCCCAAAGGTCCCCTGCATCCCC < 41bp 0.715203120585133 0.509258484638271 0.8003312 0.21451715 prediction 0.411889271893724 Functional Loss - CLEC2L ENSG00000236279 UTR3 Human protein_coding chr7:139229617 chr7:139229620 . . 0 24 hm5C_associated_SNPs_93432 0 0 1 IGF2BP2 POSTAR2 ENCODE chr7:139229507-139229624
64251 chr19 35741403 35741403 1 + A T LUSC 35741399 + 35741379 35741419 41 GCCTTCTCCCCGGCCAGCGTCGACAACCAGCTCAATGCCCA GCCTTCTCCCCGGCCAGCGTCGACTACCAGCTCAATGCCCA < 41bp 0.70594045833847 0.356586203097971 0.33885524 0.17462862 prediction 0.411880916676939 Functional Loss - LSR ENSG00000105699 CDS Human protein_coding chr19:35741399 chr19:35741403 nonsynonymous SNV 0.947 3 25 hm5C_associated_SNPs_93436 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35741400-35741420
64251 chr16 29818754 29818754 1 + G A SKCM 29818751 + 29818731 29818771 41 GAAGCCATCCACACGGGAGCCAAGGCCGGCCGGGTCCCCTC GAAGCCATCCACACGGGAGCCAAAGCCGGCCGGGTCCCCTC < 41bp 0.818422687279815 0.612484512463273 0.8957832 0.882609 prediction 0.411876349633083 Functional Loss - MAZ ENSG00000103495 CDS Human protein_coding chr16:29818751 chr16:29818754 synonymous SNV . 0 24 hm5C_associated_SNPs_93437 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:29818618-29818761
64251 chr15 89169933 89169933 1 + C T BLCA 89169931 + 89169911 89169951 41 TACCCGCTGGAGTGGCATCACTCGGCAGCACATGCGCAAGG TACCCGCTGGAGTGGCATCACTTGGCAGCACATGCGCAAGG < 41bp 0.859324247097126 0.653389587222606 0.084275335 0.13391113 prediction 0.41186931974904 Functional Loss - AEN ENSG00000181026 CDS Human protein_coding chr15:89169931 chr15:89169933 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_93439 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr15:89169920-89169940
64251 chr11 73536802 73536802 1 + C T COAD 73536800 + 73536780 73536820 41 CCTACAAGACAAAGCCCACCCACGGCATTGGAAAGTACAAG CCTACAAGACAAAGCCCACCCATGGCATTGGAAAGTACAAG < 41bp 0.705933759946835 0.497938860263265 0.012244582 0.015143067 prediction 0.41186751989367 Functional Loss - MRPL48 ENSG00000175581 CDS Human protein_coding chr11:73536800 chr11:73536802 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_93441 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:73536766-73536806
64251 chr19 42828899 42828899 1 + G A BLCA 42828896 + 42828876 42828916 41 TCCCCTCCCTCAGCCCCTGCCCCGAGCGGCGCCGGATTCTG TCCCCTCCCTCAGCCCCTGCCCCAAGCGGCGCCGGATTCTG < 41bp 0.789246209488933 0.583312595636882 0.096512765 0.06389162 prediction 0.411867227704102 Functional Loss - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42828896 chr19:42828899 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_93442 0 0 1 DDX59 POSTAR2 ENCODE chr19:42828812-42828968
64251 chr1 27124259 27124259 1 + G A UCEC 27124256 + 27124236 27124276 41 GAAAACCTGTTCTCCAGTCACACGATACATTCTAGGCTACT GAAAACCTGTTCTCCAGTCACACAATACATTCTAGGCTACT < 41bp 0.726012561110915 0.520079026708708 0.14029759 0.060316205 prediction 0.411867068804414 Functional Loss - PIGV ENSG00000060642 CDS Human protein_coding chr1:27124256 chr1:27124259 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_93443 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:27124259-27124322
64251 chr7 6057485 6057485 1 + C T COAD 6057483 + 6057463 6057503 41 GACATCGTGATCAACGCAAACCCGGCCTCCCCTCCCCTCTC GACATCGTGATCAACGCAAACCTGGCCTCCCCTCCCCTCTC < 41bp 0.705930276448417 0.426199995059371 0.13811019 0.14458963 prediction 0.411860552896835 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057483 chr7:6057485 nonsynonymous SNV 0.948 4 23 hm5C_associated_SNPs_93444 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:6057478-6057506
64251 chr7 6057486 6057486 1 + G T OV 6057483 + 6057463 6057503 41 GACATCGTGATCAACGCAAACCCGGCCTCCCCTCCCCTCTC GACATCGTGATCAACGCAAACCCTGCCTCCCCTCCCCTCTC < 41bp 0.705930276448417 0.296196127929584 0.13811019 0.018032521 prediction 0.411860552896835 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057483 chr7:6057486 synonymous SNV . 0 24 hm5C_associated_SNPs_93445 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:6057478-6057506
64251 chr3 63981396 63981396 1 + G T SKCM 63981393 + 63981373 63981413 41 AAATGCACAGCCTGCTGCTTCAGGGGCGATGGATCCTGTGT AAATGCACAGCCTGCTGCTTCAGTGGCGATGGATCCTGTGT < 41bp 0.705928938612709 0.301016347621129 0.9163103 0.2848784 prediction 0.411857877225418 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63981393 chr3:63981396 nonsynonymous SNV 0.020 4 24 hm5C_associated_SNPs_93446 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:63981356-63981404
64251 chr17 37034433 37034433 1 + C T COAD 37034431 + 37034411 37034451 41 GAGAAGAAGCCCTACTGCAACGCGTGAGTCCTGTTCTGGGC GAGAAGAAGCCCTACTGCAACGTGTGAGTCCTGTTCTGGGC < 41bp 0.705926446567921 0.479769027244902 0.100645304 0.105855525 prediction 0.411852893135843 Functional Loss - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37034431 chr17:37034433 nonsynonymous SNV 0.963 1 23 hm5C_associated_SNPs_93447 0 0 2 PRPF8 POSTAR2 ENCODE chr17:37034418-37034497
64251 chr19 13879234 13879234 1 + C T UCEC 13879231 + 13879211 13879251 41 CCAGGCAGAGGGAACTGCCACTGCGAGGGCCCCTGGGCGGG CCAGGCAGAGGGAACTGCCACTGTGAGGGCCCCTGGGCGGG < 41bp 0.715765836491364 0.50984006846398 0.2610405 0.1783168 prediction 0.411851536054769 Functional Loss - MRI1 ENSG00000037757 CDS Human protein_coding chr19:13879231 chr19:13879234 stopgain 0.001 0 24 hm5C_associated_SNPs_93448 0 0 4 PPIG POSTAR2 ENCODE chr19:13879185-13879273
64251 chr15 40756744 40756744 1 + G A STAD 40756741 + 40756721 40756761 41 GAGGCCGCAGTCCCAGCATGCACGAGGTGAGCTGCCTGGCA GAGGCCGCAGTCCCAGCATGCACAAGGTGAGCTGCCTGGCA < 41bp 0.819497709630505 0.613579147515768 0.24436921 0.077492505 prediction 0.411837124229473 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756741 chr15:40756744 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_93451 0 0 2 BUD13 POSTAR2 ENCODE chr15:40756740-40756797
64251 chr17 46023716 46023716 1 + G A OV 46023713 + 46023693 46023733 41 TGAGAAAGAAAAATGAGGAACTGGAACAGCTCTACCAGGAT TGAGAAAGAAAAATGAGGAACTGAAACAGCTCTACCAGGAT < 41bp 0.705914439480714 0.471876387547214 0.32253408 0.6063594 prediction 0.411828878961429 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46023713 chr17:46023716 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_93452 0 0 13 NOP58 POSTAR2 GSE43666,GSM1067861 chr17:46023696-46023734
64251 chr16 72143385 72143385 1 + G A UCEC 72143382 + 72143362 72143402 41 CTGGGCCCCATGTTCTATAGCGTGAAACAGGCGGGCAAGTC CTGGGCCCCATGTTCTATAGCGTAAAACAGGCGGGCAAGTC < 41bp 0.705912845868542 0.458475220528677 0.78103864 0.38395467 prediction 0.411825691737085 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72143382 chr16:72143385 synonymous SNV . 0 24 hm5C_associated_SNPs_93454 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:72143361-72143389
64251 chr19 48833730 48833730 1 + G C rs199576440 48833729 + 48833709 48833749 41 CCTACGGAAGCGGGAGTGAGCGCCCCGCCTCGCTCGGCTGC CCTACGGAAGCGGGAGTGAGCCCCCCGCCTCGCTCGGCTGC < 41bp 0.88590093076244 0.679988349523911 0.88277584 0.6624035 prediction 0.411825162477058 Functional Loss - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48833729 chr19:48833730 nonsynonymous SNV 0.636 0 22 hm5C_associated_SNPs_93455 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48833701-48833781
64251 chr1 32479836 32479836 1 + G A rs373256621 32479833 + 32479813 32479853 41 GGTCCCGACGCGACAGTGGGCGGGCCAGCGCCGACCCCGCT GGTCCCGACGCGACAGTGGGCGGACCAGCGCCGACCCCGCT < 41bp 0.778954050094329 0.57304329435268 0.87372 0.7997625 prediction 0.411821511483297 Functional Loss - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32479833 chr1:32479836 synonymous SNV . 0 24 hm5C_associated_SNPs_93457 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:32479809-32479845
64251 chr2 232018374 232018374 1 + G A LUSC 232018371 + 232018351 232018391 41 CTATTCTGGCCCAGGGCATACTGGATGCAGGTAAATGTTTT CTATTCTGGCCCAGGGCATACTGAATGCAGGTAAATGTTTT < 41bp 0.705910542587442 0.483441620104043 0.1702038 0.12694702 prediction 0.411821085174884 Functional Loss - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232018371 chr2:232018374 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_93458 0 0 6 FXR2 POSTAR2 ENCODE chr2:232018354-232018381
64251 chr12 110922933 110922933 1 + G A BLCA 110922930 + 110922910 110922950 41 ACTCACACATAGCTAAGCTGCAAGAGTTATGGAAAACTCCC ACTCACACATAGCTAAGCTGCAAAAGTTATGGAAAACTCCC < 41bp 0.70590708387602 0.483146528236416 0.18443522 0.049769938 prediction 0.411814167752041 Functional Loss - FAM216A ENSG00000204856 CDS Human protein_coding chr12:110922930 chr12:110922933 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_93460 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:110922896-110922933
64251 chr7 158715138 158715138 1 + C T LUSC 158715136 + 158715116 158715156 41 TGGTCTCCGTTCACGACTTACCCGAGAAGAGCTTTGTGCCC TGGTCTCCGTTCACGACTTACCTGAGAAGAGCTTTGTGCCC < 41bp 0.705904531941317 0.414892641535262 0.07337898 0.06841126 prediction 0.411809063882634 Functional Loss - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158715136 chr7:158715138 synonymous SNV . 0 23 hm5C_associated_SNPs_93462 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:158715138-158715176
64251 chr8 133844543 133844543 1 + G A rs184113048 133844540 + 133844520 133844560 41 AAGGTGCTCTTCTCCACTAACTCGATCTTCTGGGAGTTCTC AAGGTGCTCTTCTCCACTAACTCAATCTTCTGGGAGTTCTC < 41bp 0.778185768048147 0.572284291760193 0.42267275 0.76077074 prediction 0.411802952575908 Functional Loss - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133844540 chr8:133844543 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_93464 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:133844543-133844567
64251 chr1 55521671 55521671 1 + G T UCEC 55521668 + 55521648 55521688 41 TGGCTTTGTTCCTCCCAGGCCTGGAGTTTATTCGGAAAAGC TGGCTTTGTTCCTCCCAGGCCTGTAGTTTATTCGGAAAAGC < 41bp 0.705900829809525 0.301709385314323 0.3578754 0.2729397 prediction 0.411801659619049 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55521668 chr1:55521671 stopgain 0.998 0 24 hm5C_associated_SNPs_93465 0 0 1 TBRG4 POSTAR2 ENCODE chr1:55521616-55521678
64251 chr19 50549300 50549300 1 + G A UCEC 50549297 + 50549277 50549317 41 GCGGCTCAACCCTGAAGTGCCACGAGAGTGTTCACGCCAGA GCGGCTCAACCCTGAAGTGCCACAAGAGTGTTCACGCCAGA < 41bp 0.812156397328187 0.606257322553204 0.19087785 0.11810568 prediction 0.411798149549966 Functional Loss - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549297 chr19:50549300 nonsynonymous SNV 0.858 0 24 hm5C_associated_SNPs_93466 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:50549280-50549302
64251 chr6 7862645 7862645 1 + C T SKCM 7862643 + 7862623 7862663 41 AGTGAGGTGCACGTGCGCACCACCAGGTCAGCCTCCAGCCG AGTGAGGTGCACGTGCGCACCATCAGGTCAGCCTCCAGCCG < 41bp 0.861407469375116 0.655510828556211 0.31229544 0.2539526 prediction 0.411793281637809 Functional Loss - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7862643 chr6:7862645 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_93467 0 0 1 LIN28A POSTAR2 GSE39873,GSM980594 chr6:7862624-7862645
64251 chr12 123463868 123463868 1 + C T UCEC 123463866 + 123463846 123463886 41 TTCACCCGAGAGGAGCCCGCCACGGTGGATGTATGTGCGCT TTCACCCGAGAGGAGCCCGCCATGGTGGATGTATGTGCGCT < 41bp 0.804517863151564 0.598622769561869 0.2698182 0.35449284 prediction 0.411790187179391 Functional Loss - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463866 chr12:123463868 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_93468 0 0 1 PRPF8 POSTAR2 ENCODE chr12:123463865-123463894
64251 chr2 239344574 239344574 1 + C T rs34796278 239344571 + 239344551 239344591 41 CTCGAAGCTGGCGCGGACCCCAACGGAAGCCGGCACCATCG CTCGAAGCTGGCGCGGACCCCAATGGAAGCCGGCACCATCG < 41bp 0.740673381457472 0.534780458576967 0.33540875 0.31807208 prediction 0.411785845761011 Functional Loss - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239344571 chr2:239344574 synonymous SNV . 0 24 hm5C_associated_SNPs_93470 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:239344572-239344608
64251 chr19 50302734 50302734 1 + C T PRAD 50302731 + 50302711 50302751 41 GCCGTCAAGACGCACATTGACACCGTCATCAATGCCCTCAA GCCGTCAAGACGCACATTGACACTGTCATCAATGCCCTCAA < 41bp 0.749687750619706 0.543796539841849 0.0534949 0.033937216 prediction 0.411782421555713 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302731 chr19:50302734 synonymous SNV . 0 24 hm5C_associated_SNPs_93472 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr19:50302729-50302752
64251 chr15 96880682 96880682 1 + G A STAD 96880679 + 96880659 96880699 41 CCAGTACCCCAACCAGCCGACGAGATTCGGAAAGCTTTTGC CCAGTACCCCAACCAGCCGACGAAATTCGGAAAGCTTTTGC < 41bp 0.705890950763745 0.479077140226425 0.7040569 0.35618666 prediction 0.41178190152749 Functional Loss - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96880679 chr15:96880682 nonsynonymous SNV 0.994 5 24 hm5C_associated_SNPs_93473 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:96880573-96880683
64251 chr8 37914651 37914651 1 + T C LIHC 37914650 + 37914630 37914670 41 GATGGAGTGTCGGAACTCACCTGTGACCAAAACACCCCCAA GATGGAGTGTCGGAACTCACCCGTGACCAAAACACCCCCAA < 41bp 0.705886987732158 0.455340832614264 0.28403908 0.31093174 prediction 0.411773975464317 Functional Loss - EIF4EBP1 ENSG00000187840 CDS Human protein_coding chr8:37914650 chr8:37914651 synonymous SNV . 0 22 hm5C_associated_SNPs_93477 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:37914600-37914660
64251 chr3 66430726 66430726 1 - C T SKCM 66430729 - 66430709 66430749 41 CCACTGACAGGACAGCTCCCCGGGAAACAGAGGGTGCCACT CCACTGACAGGACAGCTCCCCGGAAAACAGAGGGTGCCACT < 41bp 0.803570619201359 0.597687955911705 0.9402906 0.78524196 prediction 0.411765326579308 Functional Loss - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430729 chr3:66430726 synonymous SNV . 0 24 hm5C_associated_SNPs_93482 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:66430713-66430743
64251 chr15 91184403 91184403 1 + C T GBM 91184400 + 91184380 91184420 41 AGACCAAGCCCGTATTCCAACTGCGGGAGTCTCCCGAACAC AGACCAAGCCCGTATTCCAACTGTGGGAGTCTCCCGAACAC < 41bp 0.777447949707268 0.571565794343345 0.2801051 0.23604423 prediction 0.411764310727847 Functional Loss - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91184400 chr15:91184403 synonymous SNV . 0 24 hm5C_associated_SNPs_93483 0 0 1 YBX3 POSTAR2 ENCODE chr15:91184359-91184433
64251 chr3 9969873 9969873 1 + C T SKCM 9969870 + 9969850 9969890 41 GTGTGGCCTCTGGAACCTGACTCCGTTAGGACGAACATCTG GTGTGGCCTCTGGAACCTGACTCTGTTAGGACGAACATCTG < 41bp 0.748789283887733 0.54290717950389 0.18113539 0.09722015 prediction 0.411764208767687 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9969870 chr3:9969873 synonymous SNV . 0 24 hm5C_associated_SNPs_93484 0 0 4 DDX24 POSTAR2 ENCODE chr3:9969848-9969905
64251 chr1 161582572 161582572 1 + G A rs144176068 161582569 + 161582549 161582589 41 GTTAACGCGGGTTCGATTCCCGGGTAACGAAACGTTTTTGT GTTAACGCGGGTTCGATTCCCGGATAACGAAACGTTTTTGT < 41bp 0.771947540026233 0.566067289857721 0.8937267 0.86104435 prediction 0.411760500337023 Functional Loss - HSPA7;FCGR3B ENSG00000072694;ENSG00000203747 intronic Human other chr1:161582569 chr1:161582572 . . 0 24 hm5C_associated_SNPs_93489 0 0 37 SSB POSTAR2 GSE95683,GSM2521599 chr1:161582496-161582589
64251 chr1 229431640 229431640 1 + C T GBM 229431638 + 229431618 229431658 41 GAGGCGCGGCCGGGGCTCTCCTCGTCTATGATATCACCAGG GAGGCGCGGCCGGGGCTCTCCTTGTCTATGATATCACCAGG < 41bp 0.868836263818207 0.662957979429836 0.40023527 0.15866885 prediction 0.411756568776741 Functional Loss - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229431638 chr1:229431640 synonymous SNV . 0 23 hm5C_associated_SNPs_93490 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:229431604-229431657
64251 chr7 12675690 12675690 1 + G A rs35385652 12675687 + 12675667 12675707 41 TAGGCAAGGAGCAAATGCCACACGAGATGAGCTGACAACAT TAGGCAAGGAGCAAATGCCACACAAGATGAGCTGACAACAT < 41bp 0.793692185205894 0.587814185093839 0.08953732 0.018004537 prediction 0.411756000224111 Functional Loss - SCIN ENSG00000006747 CDS Human protein_coding chr7:12675687 chr7:12675690 nonsynonymous SNV 0.217 1 24 hm5C_associated_SNPs_93491 0 0 1 U2AF2 POSTAR2 ENCODE chr7:12675658-12675709
64251 chr19 44471241 44471241 1 + T C GBM 44471240 + 44471220 44471260 41 TTCCCATCAGACATGCCATACTGGAGAAAAGCTATACAAAT TTCCCATCAGACATGCCATACCGGAGAAAAGCTATACAAAT < 41bp 0.799651480429148 0.593793527797735 0.20731595 0.83376193 prediction 0.411715905262826 Functional Loss - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44471240 chr19:44471241 synonymous SNV . 0 22 hm5C_associated_SNPs_93503 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44471231-44471256
64251 chr2 207169640 207169640 1 + G A SKCM 207169637 + 207169617 207169657 41 ATAAATCTCAGGAAGGCACGCAGGAGGTTTCAGTTCGACCA ATAAATCTCAGGAAGGCACGCAGAAGGTTTCAGTTCGACCA < 41bp 0.772557541480193 0.566700621732086 0.9108753 0.35939384 prediction 0.411713839496213 Functional Loss - ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207169637 chr2:207169640 nonsynonymous SNV 0.108 0 24 hm5C_associated_SNPs_93505 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:207169625-207169645
64251 chr6 37298891 37298891 1 + C T UCEC 37298888 + 37298868 37298908 41 GAAGAAATTGGGCTGCTTCTCGCCGAGGCATACAGACTCAA GAAGAAATTGGGCTGCTTCTCGCTGAGGCATACAGACTCAA < 41bp 0.742748681708953 0.536893013219494 0.6681828 0.25768813 prediction 0.411711336978918 Functional Loss - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37298888 chr6:37298891 synonymous SNV . 0 24 hm5C_associated_SNPs_93506 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:37298869-37298902
64251 chr9 132397678 132397678 1 + G A STAD 132397675 + 132397655 132397695 41 GCAGTGCAGGCCTCAGCCTCCTGGCCGAGGAGAGGCAGGAG GCAGTGCAGGCCTCAGCCTCCTGACCGAGGAGAGGCAGGAG < 41bp 0.705852357008825 0.466812174626292 0.28651527 0.124923944 prediction 0.41170471401765 Functional Loss - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397675 chr9:132397678 nonsynonymous SNV 0.979 0 24 hm5C_associated_SNPs_93509 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr9:132397658-132397688
64251 chr1 43310218 43310218 1 + G A rs11806841 43310215 + 43310195 43310235 41 CGGTTAAATCCCAAGATCTGCAGGATAAGTCAGCAAGATGG CGGTTAAATCCCAAGATCTGCAGAATAAGTCAGCAAGATGG < 41bp 0.705852276539002 0.497300391082569 0.8377409 0.31228745 prediction 0.411704553078004 Functional Loss - ERMAP ENSG00000228192 ncRNA_exonic Human antisense chr1:43310215 chr1:43310218 . . 0 24 hm5C_associated_SNPs_93510 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:43310207-43310255
64251 chr3 100467320 100467320 1 + G A GBM 100467317 + 100467297 100467337 41 AAGTGGGCCTAATCCTTATGCGCGTAACCGTCCTCCCTTTG AAGTGGGCCTAATCCTTATGCGCATAACCGTCCTCCCTTTG < 41bp 0.806404640452398 0.600561553168802 0.4672092 0.11323884 prediction 0.411686174567193 Functional Loss - TFG ENSG00000114354 CDS Human protein_coding chr3:100467317 chr3:100467320 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_93518 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:100467240-100467320
64251 chr1 36299646 36299646 1 + G A UCEC 36299643 + 36299623 36299663 41 AGGATGCAGGAATGCCCATCCAGGGTCAGCCATGTTTCTGC AGGATGCAGGAATGCCCATCCAGAGTCAGCCATGTTTCTGC < 41bp 0.799304011047224 0.593465661824813 0.77266574 0.40504575 prediction 0.411676698444822 Functional Loss - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36299643 chr1:36299646 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_93522 0 0 1 GRWD1 POSTAR2 ENCODE chr1:36299626-36299729
64251 chr14 77797735 77797735 1 + G T rs193058583 77797732 + 77797712 77797752 41 TGGGGTGGAGTAGGGAGATGCGGGGAGCAGGGTGGGCAGGA TGGGGTGGAGTAGGGAGATGCGGTGAGCAGGGTGGGCAGGA < 41bp 0.890823597526181 0.684988397187543 0.91837746 0.9035998 prediction 0.411670400677275 Functional Loss - GSTZ1 ENSG00000100577 UTR3 Human protein_coding chr14:77797732 chr14:77797735 . . 0 24 hm5C_associated_SNPs_93525 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:77797729-77797795
64251 chr7 150028139 150028139 1 + T C rs116285177 150028138 + 150028118 150028158 41 CAGGATGACCCCCTGGCTTACTGGGAGAAGAAGCGAGAAGC CAGGATGACCCCCTGGCTTACCGGGAGAAGAAGCGAGAAGC < 41bp 0.705829932251374 0.471999885067704 0.6834707 0.9222663 prediction 0.411659864502749 Functional Loss - ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150028138 chr7:150028139 nonsynonymous SNV 0.650 3 22 hm5C_associated_SNPs_93531 0 0 5 LIN28B POSTAR2 ENCODE chr7:150028087-150028141
64251 chr17 57647918 57647918 1 + G A UCEC 57647915 + 57647895 57647935 41 TATGATTGGTGTAACTCAACCACGAAAAGTAGCTGCTATAT TATGATTGGTGTAACTCAACCACAAAAAGTAGCTGCTATAT < 41bp 0.789045857462291 0.583224285522802 0.081917584 0.09217879 prediction 0.411643143878977 Functional Loss - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57647915 chr17:57647918 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93535 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57647889-57647920
64251 chr12 32369234 32369234 1 + T C rs201523719 32369233 + 32369213 32369253 41 GGTTGCTGAAGATGGAGAGACTCGGGAGGAAACGCTTCTGC GGTTGCTGAAGATGGAGAGACCCGGGAGGAAACGCTTCTGC < 41bp 0.835853247754068 0.630036740922013 0.46466267 0.544206 prediction 0.411633013664111 Functional Loss - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32369233 chr12:32369234 synonymous SNV . 0 22 hm5C_associated_SNPs_93536 0 0 2 UCHL5 POSTAR2 ENCODE chr12:32369195-32369400
64251 chr6 138725497 138725497 1 + G A rs11545805 138725494 + 138725474 138725514 41 CATCGGGTGGGCTCGGGTCTCCAGCCCGGCCGGGAGGAGGG CATCGGGTGGGCTCGGGTCTCCAACCCGGCCGGGAGGAGGG < 41bp 0.708459405930876 0.502646831192394 0.41485813 0.24821466 prediction 0.411625149476964 Functional Loss - HEBP2 ENSG00000051620 UTR5 Human protein_coding chr6:138725494 chr6:138725497 . . 0 24 hm5C_associated_SNPs_93544 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr6:138725473-138725518
64251 chr5 137680774 137680774 1 + G T LUAD 137680771 + 137680751 137680791 41 TGGACCTGTCTCGCTGGCAGCCGGTGTGGCGGCCCGCCCCC TGGACCTGTCTCGCTGGCAGCCGTTGTGGCGGCCCGCCCCC < 41bp 0.705807811154042 0.292531932273075 0.8434874 0.574058 prediction 0.411615622308083 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137680771 chr5:137680774 nonsynonymous SNV 0.991 0 24 hm5C_associated_SNPs_93550 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:137680760-137680780
64251 chr7 98951655 98951655 1 + C T rs73710441 98951652 + 98951632 98951672 41 AGTGGCACTGGTGGCTGGGTCCACGGGGTAAGCTTCTCTGC AGTGGCACTGGTGGCTGGGTCCATGGGGTAAGCTTCTCTGC < 41bp 0.711899816366368 0.506094788688104 0.45649338 0.57869387 prediction 0.411610055356527 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98951652 chr7:98951655 synonymous SNV . 0 24 hm5C_associated_SNPs_93553 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:98951618-98951671
64251 chr14 35465963 35465963 1 + G A rs17849754 35465960 + 35465940 35465980 41 AAAATAACATCAGCATTACGCTCGTTGAGCAATGCCACCAT AAAATAACATCAGCATTACGCTCATTGAGCAATGCCACCAT < 41bp 0.705804836561047 0.477115071011905 0.02351579 0.009355396 prediction 0.411609673122094 Functional Loss - SRP54 ENSG00000100883 CDS Human protein_coding chr14:35465960 chr14:35465963 synonymous SNV . 0 24 hm5C_associated_SNPs_93554 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:35465887-35465983
64251 chr19 804369 804369 1 + C T UCEC 804367 + 804347 804387 41 CCTCGGTGACCCCTGTGCTGCGCGGCCAGCCCATCTACATC CCTCGGTGACCCCTGTGCTGCGTGGCCAGCCCATCTACATC < 41bp 0.705791918100129 0.428715958006464 0.14980987 0.096490175 prediction 0.411583836200259 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804367 chr19:804369 synonymous SNV . 0 23 hm5C_associated_SNPs_93563 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:804341-804373
64251 chr3 32859658 32859658 1 + C T COAD 32859656 + 32859636 32859676 41 CCGGCGCCGCTCTCCTCCAACTCGTCCGCGTCGTCGTCCTC CCGGCGCCGCTCTCCTCCAACTTGTCCGCGTCGTCGTCCTC < 41bp 0.705786782453202 0.458264430386309 0.037609667 0.027205348 prediction 0.411573564906403 Functional Loss - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32859656 chr3:32859658 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_93571 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:32859645-32859680
64251 chr3 122399744 122399744 1 + G A HNSC 122399741 + 122399721 122399761 41 GGAGCTGAGGATGGCTGTGCCCGGCTCCTTCCCGCTGCTGG GGAGCTGAGGATGGCTGTGCCCGACTCCTTCCCGCTGCTGG < 41bp 0.705784716766106 0.464171239877602 0.48145512 0.08187869 prediction 0.411569433532212 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122399741 chr3:122399744 nonsynonymous SNV 0.402 2 24 hm5C_associated_SNPs_93572 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:122399743-122399744
64251 chr1 10477061 10477061 1 + C T BRCA 10477059 + 10477039 10477079 41 TGTAGGAGAAGCTGTCTTTGCTCGGTGCTTATCATCTCTGA TGTAGGAGAAGCTGTCTTTGCTTGGTGCTTATCATCTCTGA < 41bp 0.865048243094878 0.659264107619315 0.3303169 0.26304293 prediction 0.411568270951126 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10477059 chr1:10477061 nonsynonymous SNV 0.995 4 23 hm5C_associated_SNPs_93574 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:10477040-10477080
64251 chr1 149858839 149858839 1 + G T HNSC 149858836 + 149858816 149858856 41 CTGGGCAAAGTCACCATCGCCCAGGGCGGCGTTTTGCCTAA CTGGGCAAAGTCACCATCGCCCATGGCGGCGTTTTGCCTAA < 41bp 0.705780236441693 0.334951826763672 0.80005145 0.33881852 prediction 0.411560472883387 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858836 chr1:149858839 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93581 0 0 21 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:149858800-149858840
64251 chr7 1027033 1027033 1 + C T UCEC 1027031 + 1027011 1027051 41 GCTGGGCCCTGGGCGGACTCCCCGGCTGGAGGACCAGCAGG GCTGGGCCCTGGGCGGACTCCCTGGCTGGAGGACCAGCAGG < 41bp 0.820537135739516 0.614758891146439 0.6365087 0.24214548 prediction 0.411556489186154 Functional Loss - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1027031 chr7:1027033 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_93582 0 0 4 EFTUD2 POSTAR2 ENCODE chr7:1027013-1027056
64251 chr8 11667339 11667339 1 + G A PAAD 11667336 + 11667316 11667356 41 AGAGCAAGGAGAAGGATCGCCAGGTGCTGGAGGACTTCCCA AGAGCAAGGAGAAGGATCGCCAGATGCTGGAGGACTTCCCA < 41bp 0.783054111891437 0.577277510013844 0.9107246 0.91525316 prediction 0.411553203755187 Functional Loss - FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11667336 chr8:11667339 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_93583 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:11667320-11667340
64251 chr12 110787877 110787877 1 + C T rs117740426 110787875 + 110787855 110787895 41 TTTATTCTGTAGCCAGACGACACGAGGAGTCTGTGTCACTG TTTATTCTGTAGCCAGACGACATGAGGAGTCTGTGTCACTG < 41bp 0.745456710797371 0.539683765585659 0.094020426 0.14706618 prediction 0.411545890423423 Functional Loss - ATP2A2 ENSG00000174437 UTR3 Human protein_coding chr12:110787875 chr12:110787877 . . 0 23 hm5C_associated_SNPs_93587 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr12:110787850-110787878
64251 chr22 24125719 24125719 1 + C T COAD 24125716 + 24125696 24125736 41 TTTGGCTGTGCCGAGCCTGCCAACACTTTCCTCTGACCATG TTTGGCTGTGCCGAGCCTGCCAATACTTTCCTCTGACCATG < 41bp 0.724116144660941 0.518344010603506 0.37547278 0.4053266 prediction 0.41154426811487 Functional Loss - MMP11 ENSG00000099953;ENSG00000267954 CDS Human other chr22:24125716 chr22:24125719 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_93588 0 0 5 DDX55 POSTAR2 ENCODE chr22:24125708-24125788
64251 chr1 45243397 45243397 1 + C T UCEC 45243394 + 45243374 45243414 41 CATCGTGCTCATCGACAGCACACCGTACCGACAGTGGTACG CATCGTGCTCATCGACAGCACACTGTACCGACAGTGGTACG < 41bp 0.750210750448022 0.544441413852754 0.012247145 0.025789112 prediction 0.411538673190535 Functional Loss - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243394 chr1:45243397 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_93591 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243283-45243456
64251 chr16 844177 844177 1 + G T THCA 844173 + 844153 844193 41 TGTCCTGCATGCCGCTGCCTCTGCGGGCGAGCACGAGAAGG TGTCCTGCATGCCGCTGCCTCTGCTGGCGAGCACGAGAAGG < 41bp 0.705768574422293 0.48904194760023 0.6040472 0.19507125 prediction 0.411537148844585 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:844173 chr16:844177 synonymous SNV . 0 25 hm5C_associated_SNPs_93592 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:844150-844182
64251 chr11 118963883 118963883 1 + G A LGG 118963880 + 118963860 118963900 41 TCACTGCTCGTAACATTCCACGAGGGCCCCAGTTGGCTGCC TCACTGCTCGTAACATTCCACGAAGGCCCCAGTTGGCTGCC < 41bp 0.822329206612526 0.616560714885252 0.85914385 0.37565434 prediction 0.411536983454547 Functional Loss - HMBS ENSG00000256269 CDS Human protein_coding chr11:118963880 chr11:118963883 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_93593 0 0 4 RPS3 POSTAR2 ENCODE chr11:118963835-118963903
64251 chr17 7158025 7158025 1 + C T UCEC 7158022 + 7158002 7158042 41 AGGACAGATCCTGTTCCTGTCACCATTGCTCTCGATTCACT AGGACAGATCCTGTTCCTGTCACTATTGCTCTCGATTCACT < 41bp 0.781519502190619 0.575754117460881 0.2930243 0.21757469 prediction 0.411530769459475 Functional Loss - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7158022 chr17:7158025 synonymous SNV . 0 24 hm5C_associated_SNPs_93594 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7157993-7158036
64251 chr1 90401076 90401076 1 + C T UCEC 90401073 + 90401053 90401093 41 GCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATG GCTTGGACCGCCTGCCAGCCCAGTTGGGCCAGTGTCGGATG < 41bp 0.727851367704906 0.522086934549099 0.39439458 0.47037062 prediction 0.411528866311613 Functional Loss - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90401073 chr1:90401076 synonymous SNV . 0 24 hm5C_associated_SNPs_93595 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:90401058-90401097
64251 chr19 1920237 1920237 1 + A C rs553225385 1920236 + 1920216 1920256 41 TTGGCACGGCGGGAGCTCCCCACGGGTGACGCTGCTCACGG TTGGCACGGCGGGAGCTCCCCCCGGGTGACGCTGCTCACGG < 41bp 0.819966797235168 0.6142049856267 0.9252638 0.9096731 prediction 0.411523623216936 Functional Loss - SCAMP4 ENSG00000227500 intronic Human protein_coding chr19:1920236 chr19:1920237 . . 0 22 hm5C_associated_SNPs_93597 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1920149-1920251
64251 chr10 70696828 70696828 1 + C T STAD 70696826 + 70696806 70696846 41 TGGTGCATCAAGCTTTGAACCACGATCTTTGATCACCTCTG TGGTGCATCAAGCTTTGAACCATGATCTTTGATCACCTCTG < 41bp 0.872428406361652 0.666667366940688 0.099699944 0.044891357 prediction 0.411522078841928 Functional Loss - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70696826 chr10:70696828 stopgain 1.000 1 23 hm5C_associated_SNPs_93599 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:70696803-70696830
64251 chr1 119683063 119683063 1 + G A rs3934789 119683060 + 119683040 119683080 41 ATAGACGAGTAGACCTTAGGCGAGGGAAGGCATGTACTTTC ATAGACGAGTAGACCTTAGGCGAAGGAAGGCATGTACTTTC < 41bp 0.721837829038553 0.516077005541851 0.88724554 0.42041737 prediction 0.411521646993403 Functional Loss - LOC101929147 ENSG00000231365 ncRNA_exonic Human antisense chr1:119683060 chr1:119683063 . . 0 24 hm5C_associated_SNPs_93600 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:119683035-119683074
64251 chrX 30269119 30269119 1 + C T SKCM 30269117 + 30269097 30269137 41 CTTGATTTGAAGGAAGACAACCCTAGTGGCCACACCTACAC CTTGATTTGAAGGAAGACAACCTTAGTGGCCACACCTACAC < 41bp 0.705758327545352 0.433206682519262 0.07473096 0.07236001 prediction 0.411516655090704 Functional Loss - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269117 chrX:30269119 nonsynonymous SNV 0.008 3 23 hm5C_associated_SNPs_93602 0 0 1 SND1 POSTAR2 ENCODE chrX:30269043-30269126
64251 chr14 24773449 24773449 1 + G A SARC 24773446 + 24773426 24773466 41 CCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTG CCTGACCAGCCCCTCTGTGACGCACAAGCTGCGCCGCCGTG < 41bp 0.705758083298394 0.451201402087671 0.2702772 0.029413342 prediction 0.411516166596788 Functional Loss - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24773446 chr14:24773449 nonsynonymous SNV 0.960 0 24 hm5C_associated_SNPs_93604 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:24773449-24773450
64251 chr5 140047879 140047879 1 + C T BLCA 140047877 + 140047857 140047897 41 TCTGGTCATCAGGTCACCATCTCAAGGCCTGCCGAGCTGTG TCTGGTCATCAGGTCACCATCTTAAGGCCTGCCGAGCTGTG < 41bp 0.879985670703964 0.674227691153545 0.17526522 0.14330688 prediction 0.411515959100839 Functional Loss - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140047877 chr5:140047879 synonymous SNV . 0 23 hm5C_associated_SNPs_93605 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:140047850-140047886
64251 chr17 27069024 27069024 1 + T C rs75850216 27069023 + 27069003 27069043 41 TGAGGCACCCGGATTCACCTCTGGACCACCCTGATATTGCT TGAGGCACCCGGATTCACCTCCGGACCACCCTGATATTGCT < 41bp 0.798141440558882 0.592388233049865 0.18990836 0.18256932 prediction 0.411506415018034 Functional Loss - NEK8 ENSG00000265073 ncRNA_intronic Human antisense chr17:27069023 chr17:27069024 . . 0 22 hm5C_associated_SNPs_93610 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:27069018-27069038
64251 chrX 154444803 154444803 1 + C T UCEC 154444801 + 154444781 154444821 41 TGTGGCAAAGGAGAAATGGCCACAGGGAATGGGCGGCGGCT TGTGGCAAAGGAGAAATGGCCATAGGGAATGGGCGGCGGCT < 41bp 0.802258862515771 0.596512814494294 0.72203064 0.7241673 prediction 0.411492096042954 Functional Loss - VBP1 ENSG00000155959 CDS Human protein_coding chrX:154444801 chrX:154444803 nonsynonymous SNV 0.053 0 23 hm5C_associated_SNPs_93613 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:154444760-154444820
64251 chr12 123249868 123249868 1 + G T UCEC 123249865 + 123249845 123249885 41 ATCTAGAAAATTCACCCAAACAAGAAGCTGGAATTAGTGAG ATCTAGAAAATTCACCCAAACAATAAGCTGGAATTAGTGAG < 41bp 0.705743231380691 0.337486727467937 0.33961192 0.13292584 prediction 0.411486462761381 Functional Loss - DENR ENSG00000139726 CDS Human protein_coding chr12:123249865 chr12:123249868 stopgain 1.000 1 24 hm5C_associated_SNPs_93615 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067861 chr12:123249830-123249868
64251 chr17 37818521 37818521 1 + G A UCEC 37818518 + 37818498 37818538 41 CCATAGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCA CCATAGGGGAGAGAATGGCCCTGAGGGCTTCATCGTGCTCA < 41bp 0.82195504465856 0.616212739569305 0.8714094 0.30079967 prediction 0.41148461017851 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37818518 chr17:37818521 nonsynonymous SNV 0.975 4 24 hm5C_associated_SNPs_93616 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:37818510-37818532
64251 chr1 156348148 156348148 1 + C T rs190623502 156348145 + 156348125 156348165 41 CCCAGCTGGAGAAGAGCAAGCACCGCCAGGGCTCCGTCTAC CCCAGCTGGAGAAGAGCAAGCACTGCCAGGGCTCCGTCTAC < 41bp 0.713170457271094 0.507431089345785 0.027869552 0.18868011 prediction 0.411478735850618 Functional Loss - RHBG ENSG00000132677 CDS Human protein_coding chr1:156348145 chr1:156348148 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_93617 0 0 1 PRPF8 POSTAR2 ENCODE chr1:156348100-156348182
64251 chr8 145235110 145235110 1 + G T LUSC 145235106 + 145235086 145235126 41 GGTCTGGGACTGGCAGCAGGCGGCGAGTGGCGTCCTGGTGG GGTCTGGGACTGGCAGCAGGCGGCTAGTGGCGTCCTGGTGG < 41bp 0.74253465412016 0.536800241202811 0.88262457 0.46301126 prediction 0.411468825834697 Functional Loss - MROH1 ENSG00000179832 CDS Human protein_coding chr8:145235106 chr8:145235110 synonymous SNV . 0 25 hm5C_associated_SNPs_93621 0 0 4 BUD13 POSTAR2 ENCODE chr8:145235076-145235141
64251 chr10 70514543 70514543 1 + G A SKCM 70514540 + 70514520 70514560 41 GTGCTCTTGCTGAGGACCCACAAGAACTTCGAGATGGATTC GTGCTCTTGCTGAGGACCCACAAAAACTTCGAGATGGATTC < 41bp 0.705732900614723 0.487667514943031 0.07650229 0.09238756 prediction 0.411465801229445 Functional Loss - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70514540 chr10:70514543 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_93623 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70514494-70514598
64251 chr17 7592283 7592283 1 + C T DLBC 7592280 + 7592260 7592300 41 TTCTGAAAATACAAGCCTTCCTGCAGAAGAAGCAAACGGGA TTCTGAAAATACAAGCCTTCCTGTAGAAGAAGCAAACGGGA < 41bp 0.743812359077639 0.538081263245549 0.10841477 0.116909534 prediction 0.41146219166418 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7592280 chr17:7592283 nonsynonymous SNV 0.753 0 24 hm5C_associated_SNPs_93625 0 0 1 SF3B1 POSTAR2 ENCODE chr17:7592244-7592284
64251 chr17 7466564 7466564 1 + A C UCEC 7466560 + 7466540 7466580 41 GCCAGATCCTGGGTCAGGGACCACAGTGCCAGCCAGACGCC GCCAGATCCTGGGTCAGGGACCACCGTGCCAGCCAGACGCC < 41bp 0.705730227115617 0.293897702660869 0.16448697 0.17646039 prediction 0.411460454231234 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466560 chr17:7466564 synonymous SNV . 0 25 hm5C_associated_SNPs_93626 0 0 10 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:7466522-7466564
64251 chr2 209212639 209212639 1 + G A UCEC 209212636 + 209212616 209212656 41 GAGGGACAGCAGGGAAAAGCCCCGATCTCTCTTCCCAGAAG GAGGGACAGCAGGGAAAAGCCCCAATCTCTCTTCCCAGAAG < 41bp 0.705727451811704 0.483482674399417 0.6025109 0.34684294 prediction 0.411454903623408 Functional Loss - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209212636 chr2:209212639 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_93628 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr2:209212620-209212640
64251 chr16 27460441 27460441 1 - T A LUSC 27460443 - 27460423 27460463 41 ACTGTCAAACGTGTCCATATCCAGGCCGGCCAGGGGTGAGC ACTGTCAAACGTGTCCATATCCTGGCCGGCCAGGGGTGAGC < 41bp 0.714422902111102 0.50870060381029 0.72374815 0.29004115 prediction 0.411444596601625 Functional Loss - IL21R ENSG00000103522 CDS Human protein_coding chr16:27460443 chr16:27460441 nonsynonymous SNV 0.972 3 23 hm5C_associated_SNPs_93630 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr16:27460419-27460450
64251 chr2 33623713 33623713 1 + G A rs41291171 33623710 + 33623690 33623730 41 ATTGCACCTACCCCGGAAGGCTGGAAATACAGAAACAGCAT ATTGCACCTACCCCGGAAGGCTGAAAATACAGAAACAGCAT < 41bp 0.736960183583886 0.53124001094771 0.16607794 0.053441584 prediction 0.411440345272352 Functional Loss - LTBP1 ENSG00000049323 UTR3 Human protein_coding chr2:33623710 chr2:33623713 . . 0 24 hm5C_associated_SNPs_93631 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:33623687-33623714
64251 chr1 1169740 1169740 1 + G A rs376392731 1169737 + 1169717 1169757 41 TCTTGCCATGGGTTTGGGAGCAGGTTTGGGTTACTTGCGTT TCTTGCCATGGGTTTGGGAGCAGATTTGGGTTACTTGCGTT < 41bp 0.776073754083729 0.570353755845404 0.8999107 0.9081726 prediction 0.411439996476649 Functional Loss - B3GALT6 ENSG00000176022 UTR3 Human protein_coding chr1:1169737 chr1:1169740 . . 0 24 hm5C_associated_SNPs_93632 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:1169728-1169753
64251 chr19 36278704 36278704 1 + C T HNSC 36278702 + 36278682 36278722 41 CTCTGGGCCCCCCTGCACCACTCGACAGGGGAGAGAACCTG CTCTGGGCCCCCCTGCACCACTTGACAGGGGAGAGAACCTG < 41bp 0.845040071352352 0.639324544249045 0.836261 0.10286611 prediction 0.411431054206615 Functional Loss - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278702 chr19:36278704 synonymous SNV . 0 23 hm5C_associated_SNPs_93634 0 0 2 DDX59 POSTAR2 ENCODE chr19:36278567-36278705
64251 chr5 34930003 34930003 1 + G A UCEC 34930000 + 34929980 34930020 41 TCAAGAAGGCCTATCGGAAGCTGGCCCTGAAATGGCACCCG TCAAGAAGGCCTATCGGAAGCTGACCCTGAAATGGCACCCG < 41bp 0.791962626416576 0.586248472555779 0.16804144 0.21063015 prediction 0.411428307721593 Functional Loss - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34930000 chr5:34930003 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_93638 0 0 3 PRPF8 POSTAR2 ENCODE chr5:34929977-34930113
64251 chr7 75517437 75517437 1 + G A STAD 75517434 + 75517414 75517454 41 CCTCCTGGCCCTCCTGCACCCCCGGGCACATGCCCACCTTG CCTCCTGGCCCTCCTGCACCCCCAGGCACATGCCCACCTTG < 41bp 0.831336345477267 0.625626625364824 0.2988751 0.18519858 prediction 0.411419440224886 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517434 chr7:75517437 nonsynonymous SNV 0.804 1 24 hm5C_associated_SNPs_93639 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75517409-75517454
64251 chr22 45914606 45914606 1 + C T SKCM 45914603 + 45914583 45914623 41 AGGCCTGCTGTGCGGACGGACACCGGATGGCCACTCATCAG AGGCCTGCTGTGCGGACGGACACTGGATGGCCACTCATCAG < 41bp 0.705708562007309 0.482377227804738 0.21977597 0.14424202 prediction 0.411417124014618 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45914603 chr22:45914606 nonsynonymous SNV 0.087 2 24 hm5C_associated_SNPs_93641 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:45914600-45914620
64251 chr18 3452023 3452023 1 + C T rs145465582 3452021 + 3452001 3452041 41 GTCTGCCGGGGTGGGCTCCCCGCATTGTTCGGGCTCCGGCG GTCTGCCGGGGTGGGCTCCCCGTATTGTTCGGGCTCCGGCG < 41bp 0.705705851014586 0.47841660614536 0.27244958 0.3157445 prediction 0.411411702029172 Functional Loss - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3452021 chr18:3452023 nonsynonymous SNV 0.004 1 23 hm5C_associated_SNPs_93644 0 0 8 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr18:3452017-3452038
64251 chr14 24619890 24619890 1 + G T LUAD 24619887 + 24619867 24619907 41 TTCTGCAACTCGAGCCCTGGCTGGGTGTGTGTTATGTGCAA TTCTGCAACTCGAGCCCTGGCTGTGTGTGTGTTATGTGCAA < 41bp 0.705704346276233 0.307196295450656 0.49247998 0.077938855 prediction 0.411408692552467 Functional Loss - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24619887 chr14:24619890 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_93646 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24619851-24619900
64251 chr1 24113776 24113776 1 + C T STAD 24113774 + 24113754 24113794 41 TTTTCTTGCAGCTTCGCCGACACGAGGTGACCATCTGCAAT TTTTCTTGCAGCTTCGCCGACATGAGGTGACCATCTGCAAT < 41bp 0.859370676038037 0.653668982743096 0.18083921 0.3521412 prediction 0.411403386589883 Functional Loss - PITHD1 ENSG00000057757 CDS Human protein_coding chr1:24113774 chr1:24113776 synonymous SNV . 0 23 hm5C_associated_SNPs_93652 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:24113754-24113787
64251 chr5 150838460 150838460 1 + G A STAD 150838457 + 150838437 150838477 41 CCTCAACAACCTCTCCTCCCCGGGCTCCTACCAGCGCTTTG CCTCAACAACCTCTCCTCCCCGGACTCCTACCAGCGCTTTG < 41bp 0.705701263526985 0.447520845703022 0.8363911 0.394884 prediction 0.41140252705397 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838457 chr5:150838460 nonsynonymous SNV 0.874 0 24 hm5C_associated_SNPs_93653 0 0 1 ZNF622 POSTAR2 ENCODE chr5:150838383-150838492
64251 chr15 85333993 85333993 1 + C T COAD 85333990 + 85333970 85334010 41 AGTGCAGTTTCTGTGCCCACCAGCGGATTCATGCACACAAG AGTGCAGTTTCTGTGCCCACCAGTGGATTCATGCACACAAG < 41bp 0.744242943177725 0.538542278692598 0.38699335 0.098567754 prediction 0.411401328970254 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85333990 chr15:85333993 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93654 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:85333973-85333996
64251 chr11 35219752 35219752 1 + G A READ 35219749 + 35219729 35219769 41 AGACAGACACCTCAGTTTTTCTGGATCAGGCATTGATGATG AGACAGACACCTCAGTTTTTCTGAATCAGGCATTGATGATG < 41bp 0.77926297846464 0.573573706002467 0.25005132 0.15750295 prediction 0.411378544924347 Functional Loss - CD44 ENSG00000026508 CDS Human protein_coding chr11:35219749 chr11:35219752 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_93661 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:35219740-35219780
64251 chr8 145135423 145135423 1 + G T GBM 145135420 + 145135400 145135440 41 CGGGTGTTGGAGGCTGCTGCCCAGGCTGCCCGAGATGTGCA CGGGTGTTGGAGGCTGCTGCCCATGCTGCCCGAGATGTGCA < 41bp 0.705686539615253 0.318087660070776 0.32038054 0.08776486 prediction 0.411373079230506 Functional Loss - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135420 chr8:145135423 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_93663 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145135366-145135433
64251 chr8 22106000 22106000 1 + G A COAD 22105997 + 22105977 22106017 41 CAGACTCTCTTTGGCAGTTCCTCGATGACCCCGGCCTGAGG CAGACTCTCTTTGGCAGTTCCTCAATGACCCCGGCCTGAGG < 41bp 0.813485122049553 0.607799583724906 0.90209323 0.9355403 prediction 0.411371076649295 Functional Loss - POLR3D ENSG00000168495 CDS Human protein_coding chr8:22105997 chr8:22106000 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_93664 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr8:22106000-22106001
64251 chrX 48675014 48675014 1 + C T UCEC 48675011 + 48674991 48675031 41 TTGCCACTGGCGCTGCCTGCCGCCTGGTGGAGGCTGTGCTC TTGCCACTGGCGCTGCCTGCCGCTTGGTGGAGGCTGTGCTC < 41bp 0.740268480109589 0.534595289923196 0.58371335 0.39732468 prediction 0.411346380372785 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48675011 chrX:48675014 synonymous SNV . 0 24 hm5C_associated_SNPs_93673 0 0 2 EIF3H POSTAR2 ENCODE chrX:48674957-48675025
64251 chr16 20926885 20926885 1 + C T MESO 20926882 + 20926862 20926902 41 TTTGGTGGGTCTGAAGATGACAACGGCAACACGACAAGAAG TTTGGTGGGTCTGAAGATGACAATGGCAACACGACAAGAAG < 41bp 0.705673157640262 0.493642753802855 0.3658734 0.41868943 prediction 0.411346315280523 Functional Loss - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20926882 chr16:20926885 nonsynonymous SNV 0.815 0 24 hm5C_associated_SNPs_93674 0 0 1 U2AF2 POSTAR2 ENCODE chr16:20926856-20926911
64251 chr8 144358226 144358226 1 + G A rs566090306 144358223 + 144358203 144358243 41 ATCCAGCGCGGAGCGGCCGGCGGGCCAGCCGCCTGGGGCCG ATCCAGCGCGGAGCGGCCGGCGGACCAGCCGCCTGGGGCCG < 41bp 0.805507393720951 0.599835811581305 0.91465014 0.9012179 prediction 0.411343164279291 Functional Loss - GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358223 chr8:144358226 nonsynonymous SNV 0.017 1 24 hm5C_associated_SNPs_93675 0 0 2 RBM15 POSTAR2 ENCODE chr8:144358175-144358389
64251 chr19 11475316 11475316 1 + C T BRCA 11475313 + 11475293 11475333 41 GACTCTATCCCTCCCCCTTCCACCGGGACAACTTCAGCCCT GACTCTATCCCTCCCCCTTCCACTGGGACAACTTCAGCCCT < 41bp 0.705671534790803 0.491528354087169 0.76116395 0.5237645 prediction 0.411343069581605 Functional Loss - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11475313 chr19:11475316 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_93676 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:11475288-11475338
64251 chrX 151870304 151870304 1 + G T rs116616525 151870302 + 151870282 151870322 41 CAGTGGGAGGGGGTTTGGGCCAGTGCACCTTCCGGGGCCCC CAGTGGGAGGGGGTTTGGGCCATTGCACCTTCCGGGGCCCC < 41bp 0.705667654815537 0.353689359029591 0.5985776 0.44235402 prediction 0.411335309631075 Functional Loss - MAGEA6 ENSG00000197172 UTR3 Human protein_coding chrX:151870302 chrX:151870304 . . 0 23 hm5C_associated_SNPs_93680 0 0 1 SUB1 POSTAR2 ENCODE chrX:151870297-151870320
64251 chr22 21141180 21141180 1 + G A SKCM 21141177 + 21141157 21141197 41 AAACAGTTCAAGCACCAAGGCACGATCACAGTGAACGAGGA AAACAGTTCAAGCACCAAGGCACAATCACAGTGAACGAGGA < 41bp 0.784636516686545 0.578971431929278 0.02364391 0.01849261 prediction 0.411330169514534 Functional Loss - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21141177 chr22:21141180 synonymous SNV . 0 24 hm5C_associated_SNPs_93682 0 0 4 NOL12 POSTAR2 ENCODE chr22:21141160-21141196
64251 chr17 72744976 72744976 1 + G C rs371164179 72744972 + 72744952 72744992 41 CCCAAGTCGCGCCGCTGACCCGTCGCAGGGCGAGATGAGCG CCCAAGTCGCGCCGCTGACCCGTCCCAGGGCGAGATGAGCG < 41bp 0.707817252777521 0.502155187344047 0.22162846 0.14088193 prediction 0.411324130866948 Functional Loss - SLC9A3R1 ENSG00000266036 ncRNA_exonic Human antisense chr17:72744972 chr17:72744976 . . 0 25 hm5C_associated_SNPs_93684 0 0 3 DDX3X POSTAR2 ENCODE chr17:72744959-72745027
64251 chr7 64498882 64498882 1 + G T LUAD 64498879 + 64498859 64498899 41 AGAGGCAGAAGGAGCGGGACCCCGAGCACCGGGCCCTCTGC AGAGGCAGAAGGAGCGGGACCCCTAGCACCGGGCCCTCTGC < 41bp 0.919867278924569 0.714207612982039 0.36357263 0.082060635 prediction 0.41131933188506 Functional Loss - CCT6P3 ENSG00000234585;ENSG00000239985 ncRNA_exonic Human other chr7:64498879 chr7:64498882 . . 0 24 hm5C_associated_SNPs_93685 0 0 3 CSTF2T POSTAR2 ENCODE chr7:64498850-64498906
64251 chr19 49510303 49510303 1 + G A COAD 49510300 + 49510280 49510320 41 GCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGC GCGCAGGCCCTGGGCCCTGACACACCATTCACAGCCATCGC < 41bp 0.705658296725151 0.45237675885618 0.112748384 0.023919791 prediction 0.411316593450303 Functional Loss - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49510300 chr19:49510303 synonymous SNV . 0 24 hm5C_associated_SNPs_93687 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:49510299-49510324
64251 chr5 138147917 138147917 1 + G A UCEC 138147914 + 138147894 138147934 41 TGAGGAATGCTGGCAATGAACAAGACTTAGGAATCCAGTAT TGAGGAATGCTGGCAATGAACAAAACTTAGGAATCCAGTAT < 41bp 0.78592189624314 0.580270551218824 0.19199494 0.08147085 prediction 0.411302690048632 Functional Loss - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138147914 chr5:138147917 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_93693 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:138147887-138147969
64251 chr1 22987523 22987523 1 + C T LUAD 22987520 + 22987500 22987540 41 GAACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGC GAACCATCAACGTCCCCCTGCGCTGGGACCAGACCATCCGC < 41bp 0.714921199957384 0.509271534234182 0.15676522 0.17844978 prediction 0.411299331446405 Functional Loss - C1QB ENSG00000173369 CDS Human protein_coding chr1:22987520 chr1:22987523 nonsynonymous SNV 0.038 2 24 hm5C_associated_SNPs_93694 0 0 1 DGCR8 POSTAR2 ENCODE chr1:22987514-22987553
64251 chr2 190327259 190327259 1 + C T COAD 190327257 + 190327237 190327277 41 AATCTGTACTTGTAGAGTGGCGCGATGCAACAGAGAAGAAT AATCTGTACTTGTAGAGTGGCGTGATGCAACAGAGAAGAAT < 41bp 0.871356796901543 0.665717226271675 0.4411221 0.59191227 prediction 0.411279141259736 Functional Loss - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190327257 chr2:190327259 synonymous SNV . 0 23 hm5C_associated_SNPs_93702 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:190327218-190327263
64251 chr22 38055298 38055298 1 + A C STAD 38055294 + 38055274 38055314 41 CGTGCGCGCACCTGCGCGACCCCGAGTGCCTACTCGTGGCC CGTGCGCGCACCTGCGCGACCCCGCGTGCCTACTCGTGGCC < 41bp 0.705634268299129 0.303499126276844 0.48906448 0.38509795 prediction 0.411268536598258 Functional Loss - PDXP ENSG00000241360 CDS Human protein_coding chr22:38055294 chr22:38055298 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_93706 0 0 2 GEMIN5 POSTAR2 ENCODE chr22:38055171-38055305
64251 chr1 151372119 151372119 1 + G T UCEC 151372115 + 151372095 151372135 41 TTTGGGCGGGGGGTCCGGCCCCAGGACAGTTTTACCGCATT TTTGGGCGGGGGGTCCGGCCCCAGTACAGTTTTACCGCATT < 41bp 0.746773216401431 0.541140969533868 0.44625401 0.15452728 prediction 0.411264493735124 Functional Loss - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151372115 chr1:151372119 nonsynonymous SNV 0.913 4 25 hm5C_associated_SNPs_93710 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151372072-151372119
64251 chr1 65138882 65138882 1 + C T CESC 65138880 + 65138860 65138900 41 AGGGGTTATCTGGTGGCGCACCCGACTCTCATCGACCCCAA AGGGGTTATCTGGTGGCGCACCTGACTCTCATCGACCCCAA < 41bp 0.70562939242747 0.405547813339223 0.14384764 0.2996481 prediction 0.41125878485494 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65138880 chr1:65138882 nonsynonymous SNV 0.384 4 23 hm5C_associated_SNPs_93712 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:65138854-65138889
64251 chr16 30770365 30770365 1 + A T BRCA 30770361 + 30770341 30770381 41 GGCTCTGGTGGGGCCACTGTCTCTAGTTCCTCTTTCTGCGG GGCTCTGGTGGGGCCACTGTCTCTTGTTCCTCTTTCTGCGG < 41bp 0.705629044001217 0.38005151165108 0.8951842 0.24507195 prediction 0.411258088002433 Functional Loss - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30770361 chr16:30770365 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_93713 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:30770360-30770380
64251 chr7 26331628 26331628 1 + G A rs71532932 26331625 + 26331605 26331645 41 CGCCGCCGCCGCTGCCGCCGCGCGCCTTTGAGTCAGCAAAC CGCCGCCGCCGCTGCCGCCGCGCACCTTTGAGTCAGCAAAC < 41bp 0.787143659321785 0.581516324691088 0.21984833 0.11409351 prediction 0.411254669261393 Functional Loss - SNX10 ENSG00000086300 UTR5 Human protein_coding chr7:26331625 chr7:26331628 . . 0 24 hm5C_associated_SNPs_93715 0 0 6 DDX3X POSTAR2 ENCODE chr7:26331531-26331647
64251 chr15 63862713 63862713 1 + C T STAD 63862710 + 63862690 63862730 41 TTGGAACTTCAGGGCGGTTTCAACGGTGTTTCCCGCTCAGC TTGGAACTTCAGGGCGGTTTCAATGGTGTTTCCCGCTCAGC < 41bp 0.755329561621196 0.549705743378818 0.9067055 0.85414004 prediction 0.411247636484756 Functional Loss - USP3 ENSG00000140455 CDS Human protein_coding chr15:63862710 chr15:63862713 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_93718 0 0 3 GRWD1 POSTAR2 ENCODE chr15:63862685-63862767
64251 chr3 45537800 45537800 1 + G A SKCM 45537797 + 45537777 45537817 41 GCAGCCAAGAGAGAGACAGACACGATGGATACCTTTGTTGA GCAGCCAAGAGAGAGACAGACACAATGGATACCTTTGTTGA < 41bp 0.798496097975789 0.592872888753487 0.18859929 0.046633273 prediction 0.411246418444605 Functional Loss - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45537797 chr3:45537800 synonymous SNV . 0 24 hm5C_associated_SNPs_93719 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chr3:45537790-45537818
64251 chr4 17598705 17598705 1 + A T LAML 17598703 + 17598683 17598723 41 TGTGAAAATATGCCCAGCGGCAAGGCCAACAAGCCGGGGGA TGTGAAAATATGCCCAGCGGCATGGCCAACAAGCCGGGGGA < 41bp 0.740967582319238 0.53534519104951 0.74111795 0.4274751 prediction 0.411244782539455 Functional Loss - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17598703 chr4:17598705 nonsynonymous SNV 0.975 2 23 hm5C_associated_SNPs_93721 0 0 2 YBX3 POSTAR2 ENCODE chr4:17598667-17598706
64251 chr7 106508373 106508373 1 + C T STAD 106508370 + 106508350 106508390 41 TGGTGCAGACTCTGGACTGCCTGCGCTACTGGAAGGCCACG TGGTGCAGACTCTGGACTGCCTGTGCTACTGGAAGGCCACG < 41bp 0.755720185633646 0.550101184597902 0.14473361 0.08023369 prediction 0.411238002071489 Functional Loss - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508370 chr7:106508373 nonsynonymous SNV 0.976 0 24 hm5C_associated_SNPs_93723 0 0 3 FXR2 POSTAR2 ENCODE chr7:106508347-106508402
64251 chr19 50303015 50303015 1 + G A UCEC 50303012 + 50302992 50303032 41 AGACGGCAGACTACGCCATCCGCGAGGAGATCGTGAGTGCT AGACGGCAGACTACGCCATCCGCAAGGAGATCGTGAGTGCT < 41bp 0.816808379009655 0.611191941631792 0.33629638 0.13212836 prediction 0.411232874755727 Functional Loss - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50303012 chr19:50303015 nonsynonymous SNV 0.548 2 24 hm5C_associated_SNPs_93725 0 0 6 DDX24 POSTAR2 ENCODE chr19:50302971-50303023
64251 chrX 48123236 48123236 1 + C T STAD 48123233 + 48123213 48123253 41 AAAGATCATGCCCAAGAAGCCAGCAGAGGACGAAAATGATT AAAGATCATGCCCAAGAAGCCAGTAGAGGACGAAAATGATT < 41bp 0.731411578044979 0.525795172006956 0.06325072 0.049880654 prediction 0.411232812076047 Functional Loss - SSX1 ENSG00000126752 CDS Human protein_coding chrX:48123233 chrX:48123236 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_93726 0 0 2 EFTUD2 POSTAR2 ENCODE chrX:48123167-48123236
64251 chr17 19186593 19186593 1 + C T SKCM 19186591 + 19186571 19186611 41 ACCTACAACGTGGTGGCCTTCTCGGAGATCATGAGCATGGT ACCTACAACGTGGTGGCCTTCTTGGAGATCATGAGCATGGT < 41bp 0.705613404410254 0.423821015136296 0.14260688 0.058700204 prediction 0.411226808820508 Functional Loss - EPN2 ENSG00000072134 CDS Human protein_coding chr17:19186591 chr17:19186593 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_93730 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:19186580-19186623
64251 chr9 90321557 90321557 1 + G A UVM 90321554 + 90321534 90321574 41 TGCTGGTGCTGCTGGTCAACCACGGCCAGGGCATTGAGGTC TGCTGGTGCTGCTGGTCAACCACAGCCAGGGCATTGAGGTC < 41bp 0.705610178001262 0.454284444093949 0.3155455 0.07977903 prediction 0.411220356002525 Functional Loss - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90321554 chr9:90321557 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_93732 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:90321541-90321564
64251 chr14 69928413 69928413 1 + G A rs111495442 69928410 + 69928390 69928430 41 TGCCTGGTTTTTCTCTTTTTCAAGGATTAGAACTAAGAGGA TGCCTGGTTTTTCTCTTTTTCAAAGATTAGAACTAAGAGGA < 41bp 0.723736720222288 0.518128111305603 0.9028139 0.55453813 prediction 0.41121721783337 Functional Loss - SLC39A9 ENSG00000029364 splicing Human protein_coding chr14:69928410 chr14:69928413 . 0.977 0 24 hm5C_associated_SNPs_93734 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:69928332-69928449
64251 chr15 41749892 41749892 1 + C T LAML 41749889 + 41749869 41749909 41 GGTGAAGTGTCAGACTCTGACAGCAACAGCTCCTCTTCCAG GGTGAAGTGTCAGACTCTGACAGTAACAGCTCCTCTTCCAG < 41bp 0.76647268517293 0.560866626441723 0.33782816 0.19267651 prediction 0.411212117462414 Functional Loss - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41749889 chr15:41749892 synonymous SNV . 0 24 hm5C_associated_SNPs_93736 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:41749882-41749911
64251 chr15 59368258 59368258 1 + C T COAD 59368256 + 59368236 59368276 41 CTGCTGCCCTGTTTCTTCCTCCCGAGCTGCAATCTTTGGCC CTGCTGCCCTGTTTCTTCCTCCTGAGCTGCAATCTTTGGCC < 41bp 0.705604983831987 0.407567937349162 0.24790692 0.19432238 prediction 0.411209967663974 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59368256 chr15:59368258 stopgain 1.000 1 23 hm5C_associated_SNPs_93738 0 0 4 GRWD1 POSTAR2 ENCODE chr15:59368245-59368358
64251 chr15 59368259 59368259 1 + G A COAD 59368256 + 59368236 59368276 41 CTGCTGCCCTGTTTCTTCCTCCCGAGCTGCAATCTTTGGCC CTGCTGCCCTGTTTCTTCCTCCCAAGCTGCAATCTTTGGCC < 41bp 0.705604983831987 0.456353260994188 0.24790692 0.17103606 prediction 0.411209967663974 Functional Loss - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59368256 chr15:59368259 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_93739 0 0 4 GRWD1 POSTAR2 ENCODE chr15:59368245-59368358
64251 chr14 24868217 24868217 1 + G A rs541667938 24868214 + 24868194 24868234 41 TCCCACCCCTAGCTACAACCCCGGGCAGGAAGAGCTCGTCG TCCCACCCCTAGCTACAACCCCGAGCAGGAAGAGCTCGTCG < 41bp 0.716638901445154 0.511039351379762 0.32378304 0.17275071 prediction 0.411199100130784 Functional Loss - NYNRIN ENSG00000205978 UTR5 Human protein_coding chr14:24868214 chr14:24868217 . . 0 24 hm5C_associated_SNPs_93741 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:24868217-24868218
64251 chr3 183516739 183516739 1 + C T SKCM 183516736 + 183516716 183516756 41 TCTGCCTGTAGCTGCCCCAACTCCAGTTGTCCCCAGCTCTG TCTGCCTGTAGCTGCCCCAACTCTAGTTGTCCCCAGCTCTG < 41bp 0.772615415480274 0.567017000631385 0.91349727 0.52114844 prediction 0.411196829697779 Functional Loss - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183516736 chr3:183516739 nonsynonymous SNV 0.084 1 24 hm5C_associated_SNPs_93744 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:183516704-183516743
64251 chr1 86048778 86048778 1 + A C rs538855206 86048777 + 86048757 86048797 41 CAAACAAGGGAGAAGAGTGTCAGAATCAGAATCATGGAGAA CAAACAAGGGAGAAGAGTGTCCGAATCAGAATCATGGAGAA < 41bp 0.787600930024547 0.582002743299626 0.27840382 0.03450504 prediction 0.411196373449841 Functional Loss - CYR61 ENSG00000142871 UTR3 Human protein_coding chr1:86048777 chr1:86048778 . . 0 22 hm5C_associated_SNPs_93745 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr1:86048760-86048780
64251 chr9 712280 712280 1 + C T UCEC 712278 + 712258 712298 41 AGGAAAAAGGTTGACAAAGCCACGATGGCCCAGCCGCTTGT AGGAAAAAGGTTGACAAAGCCATGATGGCCCAGCCGCTTGT < 41bp 0.844426449467608 0.638828381812116 0.2887286 0.13113385 prediction 0.411196135310984 Functional Loss - KANK1 ENSG00000107104 CDS Human protein_coding chr9:712278 chr9:712280 nonsynonymous SNV 0.583 0 23 hm5C_associated_SNPs_93746 0 0 1 GRWD1 POSTAR2 ENCODE chr9:712257-712339
64251 chr17 40835923 40835923 1 + G A COAD 40835920 + 40835900 40835940 41 CTACAGTCTCCTTACTGCGCCGAGATTCGCCAGGCTGCACG CTACAGTCTCCTTACTGCGCCGAAATTCGCCAGGCTGCACG < 41bp 0.705596018315882 0.448095069222152 0.59002686 0.1911524 prediction 0.411192036631763 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40835920 chr17:40835923 nonsynonymous SNV 0.287 2 24 hm5C_associated_SNPs_93748 0 0 1 PPIG POSTAR2 ENCODE chr17:40835917-40835939
64251 chr1 161127959 161127959 1 + G A UCEC 161127956 + 161127936 161127976 41 CATTTCAAACCTTTGTGGGCCAGGAATGTGCCCAAATTTGG CATTTCAAACCTTTGTGGGCCAGAAATGTGCCCAAATTTGG < 41bp 0.789636217912913 0.584042613932021 0.22190481 0.13297334 prediction 0.411187207961785 Functional Loss - UFC1 ENSG00000143222 CDS Human protein_coding chr1:161127956 chr1:161127959 synonymous SNV . 0 24 hm5C_associated_SNPs_93749 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:161127940-161127960
64251 chr12 52452618 52452618 1 + C T UCEC 52452615 + 52452595 52452635 41 TGTTGGGCAAACTGCCCGAGCTGCGGACCCTGTGCACCCAG TGTTGGGCAAACTGCCCGAGCTGTGGACCCTGTGCACCCAG < 41bp 0.705591895094252 0.488965794657029 0.51869714 0.37188512 prediction 0.411183790188504 Functional Loss - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52452615 chr12:52452618 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_93750 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:52452596-52452626
64251 chr11 720118 720118 1 + C T SKCM 720115 + 720095 720135 41 GCCATCACGTCTGTGGACGACGCCATCCGGAAGCTGGTGCA GCCATCACGTCTGTGGACGACGCTATCCGGAAGCTGGTGCA < 41bp 0.772537812347669 0.566950845068332 0.37572488 0.10543153 prediction 0.411173934558674 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:720115 chr11:720118 synonymous SNV . 0 24 hm5C_associated_SNPs_93753 0 0 1 GRWD1 POSTAR2 ENCODE chr11:720103-720120
64251 chr2 202901279 202901279 1 + G T rs13034579 202901276 + 202901256 202901296 41 GGTGATTTGGAAAAGAAGACCTGGGTGGAAAGCGGTTTGGA GGTGATTTGGAAAAGAAGACCTGTGTGGAAAGCGGTTTGGA < 41bp 0.705584315441713 0.325960893637496 0.31646466 0.16863939 prediction 0.411168630883425 Functional Loss - FZD7 ENSG00000155760 UTR3 Human protein_coding chr2:202901276 chr2:202901279 . . 0 24 hm5C_associated_SNPs_93754 0 0 3 LIN28A POSTAR2 GSE39873,GSM980593 chr2:202901240-202901280
64251 chr10 72468418 72468418 1 + C T STAD 72468415 + 72468395 72468435 41 TGGGCGACACAGAGCGGAAGCGGCGGCATGCCAAGCCAGGC TGGGCGACACAGAGCGGAAGCGGTGGCATGCCAAGCCAGGC < 41bp 0.735927755513422 0.530355493760229 0.8340102 0.6114966 prediction 0.411144523506387 Functional Loss - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72468415 chr10:72468418 nonsynonymous SNV 0.954 4 24 hm5C_associated_SNPs_93767 0 0 1 DDX42 POSTAR2 ENCODE chr10:72468383-72468421
64251 chr3 33877750 33877750 1 + A C COAD 33877746 + 33877726 33877766 41 CGGTCAATGTACCCATCAGTCAGAAATTTACTGGTATGTCA CGGTCAATGTACCCATCAGTCAGACATTTACTGGTATGTCA < 41bp 0.705569706413733 0.298691956318083 0.3829841 0.5269565 prediction 0.411139412827466 Functional Loss - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33877746 chr3:33877750 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_93768 0 0 6 DDX24 POSTAR2 ENCODE chr3:33877670-33877759
64251 chr22 33253252 33253252 1 + C T STAD 33253250 + 33253230 33253270 41 CCACAGATGTACCGAGGCTTCACCAAGATGCCCCATGTGCA CCACAGATGTACCGAGGCTTCATCAAGATGCCCCATGTGCA < 41bp 0.705567856498872 0.406150620579797 0.06489673 0.02591744 prediction 0.411135712997745 Functional Loss - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33253250 chr22:33253252 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_93769 0 0 5 BUD13 POSTAR2 ENCODE chr22:33253210-33253275
64251 chr7 2473158 2473158 1 + G A UCEC 2473155 + 2473135 2473175 41 GGCGCGCGAGGCCTTCCGCGCTGGCCTCAAGGTGTCCTTCG GGCGCGCGAGGCCTTCCGCGCTGACCTCAAGGTGTCCTTCG < 41bp 0.705565771608181 0.450981592758205 0.4860343 0.2551669 prediction 0.411131543216362 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473155 chr7:2473158 nonsynonymous SNV 0.810 3 24 hm5C_associated_SNPs_93770 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2473130-2473194
64251 chr5 149391845 149391845 1 + C T rs138303033 149391843 + 149391823 149391863 41 CAGTGAGAGTAGCTCCTCTGCACCAGCCACACAGTTCATCA CAGTGAGAGTAGCTCCTCTGCATCAGCCACACAGTTCATCA < 41bp 0.705559340961081 0.413452245870572 0.083927095 0.03566885 prediction 0.411118681922163 Functional Loss - HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149391843 chr5:149391845 nonsynonymous SNV 0.965 1 23 hm5C_associated_SNPs_93774 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:149391812-149391852
64251 chr14 24030833 24030833 1 - A G LIHC 24030834 - 24030814 24030854 41 ATCCTCTCAGGGCTGCCATCCTGGAAAAAATGCCTCTTGTG ATCCTCTCAGGGCTGCCATCCCGGAAAAAATGCCTCTTGTG < 41bp 0.826667403780155 0.621109598358027 0.6486188 0.6360345 prediction 0.411115610844255 Functional Loss - AP1G2 ENSG00000213983 CDS Human protein_coding chr14:24030834 chr14:24030833 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_93777 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221659 chr14:24030820-24030840
64251 chr12 72068117 72068117 1 + G A STAD 72068114 + 72068094 72068134 41 TTTTGACCTAACAGGACAAACTCGACGACTTAAAATGGATG TTTTGACCTAACAGGACAAACTCAACGACTTAAAATGGATG < 41bp 0.748273418673785 0.542717794667794 0.20625749 0.28037846 prediction 0.411111248011983 Functional Loss - THAP2 ENSG00000173451;ENSG00000258064 CDS Human other chr12:72068114 chr12:72068117 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_93780 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:72068086-72068120
64251 chr11 71238404 71238404 1 + G T HNSC 71238402 + 71238382 71238422 41 CGGCTGTGGGGGCTGTGGCTCCGGCTGTGGGGGCTGTGGCT CGGCTGTGGGGGCTGTGGCTCCTGCTGTGGGGGCTGTGGCT < 41bp 0.705555190406849 0.359877044706134 0.9001732 0.6271205 prediction 0.411110380813699 Functional Loss - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238402 chr11:71238404 nonsynonymous SNV 0.062 1 23 hm5C_associated_SNPs_93782 0 0 4 DDX6 POSTAR2 ENCODE chr11:71238365-71238458
64251 chr11 71238405 71238405 1 + G T LUSC 71238402 + 71238382 71238422 41 CGGCTGTGGGGGCTGTGGCTCCGGCTGTGGGGGCTGTGGCT CGGCTGTGGGGGCTGTGGCTCCGTCTGTGGGGGCTGTGGCT < 41bp 0.705555190406849 0.317983067978099 0.9001732 0.39420554 prediction 0.411110380813699 Functional Loss - KRTAP5-7 ENSG00000244411 CDS Human protein_coding chr11:71238402 chr11:71238405 nonsynonymous SNV 0.201 1 24 hm5C_associated_SNPs_93783 0 0 4 DDX6 POSTAR2 ENCODE chr11:71238365-71238458
64251 chr12 14650665 14650665 1 + C T STAD 14650662 + 14650642 14650682 41 CGTCTGCCCCCAGAAGCTGCCAGCACATCTCTGCCTCAGAA CGTCTGCCCCCAGAAGCTGCCAGTACATCTCTGCCTCAGAA < 41bp 0.72986079873988 0.524306098807737 0.044884503 0.018170685 prediction 0.411109399864287 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14650662 chr12:14650665 synonymous SNV . 0 24 hm5C_associated_SNPs_93784 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:14650655-14650679
64251 chr19 37854243 37854243 1 + C T LUAD 37854240 + 37854220 37854260 41 GGAAATCAACCCTGAGCACGCACCAGAGGACACACTCAGGG GGAAATCAACCCTGAGCACGCACTAGAGGACACACTCAGGG < 41bp 0.758784338469101 0.553229873910684 0.074181885 0.059461623 prediction 0.411108929116834 Functional Loss - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854240 chr19:37854243 stopgain 0.996 0 24 hm5C_associated_SNPs_93785 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37854188-37854295
64251 chr1 206619469 206619469 1 + C T LUSC 206619466 + 206619446 206619486 41 ATGATGGACCCCTACAACCTCGCCATCTGCTTCGGGCCCTC ATGATGGACCCCTACAACCTCGCTATCTGCTTCGGGCCCTC < 41bp 0.791794627980563 0.586242084657927 0.29100585 0.14843386 prediction 0.411105086645271 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206619466 chr1:206619469 synonymous SNV . 0 24 hm5C_associated_SNPs_93788 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:206619452-206619473
64251 chr16 69355063 69355063 1 + G T LUSC 69355060 + 69355040 69355080 41 ACCTCACGGATGCAAACATCCACGAGCTGGCCCGGAAGACG ACCTCACGGATGCAAACATCCACTAGCTGGCCCGGAAGACG < 41bp 0.936951774777323 0.731403395169403 0.14385414 0.069372326 prediction 0.41109675921584 Functional Loss - VPS4A ENSG00000132612 CDS Human protein_coding chr16:69355060 chr16:69355063 stopgain 0.976 1 24 hm5C_associated_SNPs_93793 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:69355036-69355074
64251 chr7 98987567 98987567 1 + C T rs148826187 98987564 + 98987544 98987584 41 ATCAAGAAGCCCATCCGCTCCACCGTCCTCAGCCTGGACTG ATCAAGAAGCCCATCCGCTCCACTGTCCTCAGCCTGGACTG < 41bp 0.758377644142895 0.552838198995186 0.1644958 0.16246092 prediction 0.411078890295418 Functional Loss - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98987564 chr7:98987567 synonymous SNV . 0 24 hm5C_associated_SNPs_93802 0 0 3 METAP2 POSTAR2 ENCODE chr7:98987551-98987628
64251 chr12 52452795 52452795 1 + G A rs374892003 52452792 + 52452772 52452812 41 CACCCCATGTGCCTTTAGTCCACGGACCCCCAGAGCACCCC CACCCCATGTGCCTTTAGTCCACAGACCCCCAGAGCACCCC < 41bp 0.799549784494891 0.594010751827528 0.21906453 0.14842057 prediction 0.411078065334726 Functional Loss - NR4A1 ENSG00000259884 ncRNA_exonic Human lincRNA chr12:52452792 chr12:52452795 . . 0 24 hm5C_associated_SNPs_93803 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:52452766-52452814
64251 chr3 57994544 57994544 1 + G A UCEC 57994541 + 57994521 57994561 41 TCGAGAATGTGTCCGTGGCGCTCGAGTTCCTGGACCGTGAG TCGAGAATGTGTCCGTGGCGCTCAAGTTCCTGGACCGTGAG < 41bp 0.705516282450577 0.475248739626645 0.2074804 0.24385032 prediction 0.411032564901154 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:57994541 chr3:57994544 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_93817 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:57994540-57994560
64251 chr3 20164214 20164214 1 + G A UCEC 20164211 + 20164191 20164231 41 TCTGGAGGAGGCCAAGAAACCCCGAGTTATGGGGGATATTC TCTGGAGGAGGCCAAGAAACCCCAAGTTATGGGGGATATTC < 41bp 0.773073141943624 0.567557569938339 0.53614295 0.80061483 prediction 0.411031144010571 Functional Loss - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20164211 chr3:20164214 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_93818 0 0 1 BUD13 POSTAR2 ENCODE chr3:20164141-20164282
64251 chr7 150093908 150093908 1 + G A rs186983308 150093905 + 150093885 150093925 41 CACTTTGTATGCCTGGACTGCGGGAAGAGGTTCAGCTGGTG CACTTTGTATGCCTGGACTGCGGAAAGAGGTTCAGCTGGTG < 41bp 0.818660815788474 0.613151785752863 0.8436458 0.3528075 prediction 0.411018060071222 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150093905 chr7:150093908 synonymous SNV . 0 24 hm5C_associated_SNPs_93825 0 0 5 RBM15 POSTAR2 GSE78030,GSM2064710 chr7:150093880-150093920
64251 chr9 124547124 124547124 1 + G A rs575752792 124547121 + 124547101 124547141 41 TGCTGTCTGAGTAGTGGCCACTGGGGTGCCTTCACTGGGCC TGCTGTCTGAGTAGTGGCCACTGAGGTGCCTTCACTGGGCC < 41bp 0.705499177360324 0.463802070025641 0.91838074 0.6771089 prediction 0.410998354720647 Functional Loss - DAB2IP ENSG00000136848 UTR3 Human protein_coding chr9:124547121 chr9:124547124 . . 0 24 hm5C_associated_SNPs_93830 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:124547116-124547143
64251 chr12 54379096 54379096 1 + C T PRAD 54379093 + 54379073 54379113 41 CTCGTACGCGGAGCCCTTGGCTGCGCCCGGCGGAGGAGAGC CTCGTACGCGGAGCCCTTGGCTGTGCCCGGCGGAGGAGAGC < 41bp 0.726802532693175 0.521304554684323 0.19727495 0.20031077 prediction 0.410995956017704 Functional Loss - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379093 chr12:54379096 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_93832 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:54379076-54379115
64251 chr5 177019607 177019607 1 + G T SARC 177019605 + 177019585 177019625 41 GGACGCAGCTGTATGACAAGCAGCGGGAGGAGTACCAGCCG GGACGCAGCTGTATGACAAGCATCGGGAGGAGTACCAGCCG < 41bp 0.921076470551705 0.715583092920779 0.7407216 0.28302485 prediction 0.410986755261852 Functional Loss - TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019605 chr5:177019607 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_93835 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:177019573-177019612
64251 chr17 6023853 6023853 1 + C T COAD 6023850 + 6023830 6023870 41 GCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCCTGAG GCAGCTTCCGGCGGCGCGGCCGGTGCTCCCACGACCCTGAG < 41bp 0.736934301228974 0.531452076055481 0.7861104 0.79824764 prediction 0.410964450346985 Functional Loss - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023850 chr17:6023853 nonsynonymous SNV 0.529 2 24 hm5C_associated_SNPs_93843 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6023833-6023862
64251 chr6 36652051 36652051 1 + C T SKCM 36652048 + 36652028 36652068 41 CTTCGACTTTGTCACCGAGACACCACTGGAGGGTGACTTCG CTTCGACTTTGTCACCGAGACACTACTGGAGGGTGACTTCG < 41bp 0.783298532305274 0.577827690252716 0.05864358 0.4566248 prediction 0.410941684105117 Functional Loss - CDKN1A ENSG00000124762 CDS Human protein_coding chr6:36652048 chr6:36652051 nonsynonymous SNV 0.923 5 24 hm5C_associated_SNPs_93854 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:36652032-36652064
64251 chr19 37619041 37619041 1 + G T BLCA 37619037 + 37619017 37619057 41 GCTCACAACTTACTCAACACCAGAGAATTCACACCAATGAA GCTCACAACTTACTCAACACCAGATAATTCACACCAATGAA < 41bp 0.721059889539267 0.515590235510586 0.14960927 0.095871 prediction 0.410939308057361 Functional Loss - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37619037 chr19:37619041 nonsynonymous SNV 0.760 3 25 hm5C_associated_SNPs_93856 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:37619019-37619057
64251 chr19 4359240 4359240 1 + C T COAD 4359238 + 4359218 4359258 41 GGAGCCAGGAGCACACCTACCTCGACAAGCTTAAGGTGAGC GGAGCCAGGAGCACACCTACCTTGACAAGCTTAAGGTGAGC < 41bp 0.849459091369038 0.643991052603448 0.26407892 0.023291826 prediction 0.410936077531181 Functional Loss - MPND ENSG00000008382 CDS Human protein_coding chr19:4359238 chr19:4359240 synonymous SNV . 0 23 hm5C_associated_SNPs_93859 0 0 2 PRPF8 POSTAR2 ENCODE chr19:4359202-4359261
64251 chr19 58806558 58806558 1 + C T COAD 58806555 + 58806535 58806575 41 TGAGTCAAGATGAGAGGACTCACCGAAGCGACAGACCCTTC TGAGTCAAGATGAGAGGACTCACTGAAGCGACAGACCCTTC < 41bp 0.728326446742997 0.522860479687297 0.059640616 0.0706839 prediction 0.4109319341114 Functional Loss - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58806555 chr19:58806558 stopgain 0.116 0 24 hm5C_associated_SNPs_93860 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:58806498-58806565
64251 chrX 153608673 153608673 1 + G T LUAD 153608669 + 153608649 153608689 41 GCCCGAGTCTGCCGGCCCGTCCAGGGCTGTCCGCCAGTCAG GCCCGAGTCTGCCGGCCCGTCCAGTGCTGTCCGCCAGTCAG < 41bp 0.74748548152029 0.542023489573692 0.66940707 0.3260634 prediction 0.410923983893195 Functional Loss - EMD ENSG00000102119 CDS Human protein_coding chrX:153608669 chrX:153608673 nonsynonymous SNV 0.584 2 25 hm5C_associated_SNPs_93865 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608639-153608691
64251 chr22 46709854 46709854 1 + C T CESC 46709852 + 46709832 46709872 41 AATCTCGCAAGGAAGTCCTCCTCGGGGCCTGTTTGGAGCGG AATCTCGCAAGGAAGTCCTCCTTGGGGCCTGTTTGGAGCGG < 41bp 0.705452396448978 0.425302467981058 0.07723442 0.040694356 prediction 0.410904792897956 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46709852 chr22:46709854 nonsynonymous SNV 0.177 1 23 hm5C_associated_SNPs_93874 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr22:46709846-46709867
64251 chr8 87437508 87437508 1 + G A UCEC 87437505 + 87437485 87437525 41 CTATTATGTGGATCATAATACTCGAACTACCACATGGGAGA CTATTATGTGGATCATAATACTCAAACTACCACATGGGAGA < 41bp 0.791020110026575 0.585567896314483 0.5138908 0.24985728 prediction 0.410904427424183 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87437505 chr8:87437508 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_93875 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:87437492-87437526
64251 chr19 11130308 11130308 1 + G A CESC 11130305 + 11130285 11130325 41 CGGGCCTTTGTCCCCCAGCTCCGGAGTGGGAAGTTCAACGT CGGGCCTTTGTCCCCCAGCTCCGAAGTGGGAAGTTCAACGT < 41bp 0.705447412062374 0.460946034000097 0.84211195 0.29961735 prediction 0.410894824124748 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11130305 chr19:11130308 synonymous SNV . 0 24 hm5C_associated_SNPs_93878 0 0 15 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11130283-11130320
64251 chr4 48852083 48852083 1 + C T STAD 48852080 + 48852060 48852100 41 CTTTACGATCAGGACAAGCACGACGATCTTCACCACCTGGG CTTTACGATCAGGACAAGCACGATGATCTTCACCACCTGGG < 41bp 0.705444926117401 0.485606964965012 0.24768385 0.2896267 prediction 0.410889852234801 Functional Loss - OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48852080 chr4:48852083 stopgain 0.440 1 24 hm5C_associated_SNPs_93879 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:48851976-48852100
64251 chr9 382633 382633 1 + C T UCEC 382631 + 382611 382651 41 AGCAGCAGTAACCCAGACCTCGCGGGGACACACTCCGCAGC AGCAGCAGTAACCCAGACCTCGTGGGGACACACTCCGCAGC < 41bp 0.835229149786444 0.629789902369372 0.9223299 0.92500126 prediction 0.410878494834145 Functional Loss - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:382631 chr9:382633 nonsynonymous SNV 0.005 0 23 hm5C_associated_SNPs_93881 0 0 1 FXR2 POSTAR2 ENCODE chr9:382510-382641
64251 chr6 133777749 133777749 1 + G T STAD 133777746 + 133777726 133777766 41 AACAGCAGTGAAACCACAGCCACGACTGGAGATGGAGCGCT AACAGCAGTGAAACCACAGCCACTACTGGAGATGGAGCGCT < 41bp 0.7054275571559 0.3371945337005 0.24077895 0.6386448 prediction 0.4108551143118 Functional Loss - EYA4 ENSG00000112319 CDS Human protein_coding chr6:133777746 chr6:133777749 synonymous SNV . 0 24 hm5C_associated_SNPs_93887 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:133777735-133777762
64251 chr11 721146 721146 1 + G A rs375898678 721143 + 721123 721163 41 CGCCCATCCCCTTCCAGCACCGCGGCGGGGATTCCCCGGAG CGCCCATCCCCTTCCAGCACCGCAGCGGGGATTCCCCGGAG < 41bp 0.832770864062716 0.627346662253742 0.7568936 0.35798734 prediction 0.410848403617948 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:721143 chr11:721146 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_93889 0 0 2 BUD13 POSTAR2 ENCODE chr11:721072-721153
64251 chr17 1939306 1939306 1 + C T UCEC 1939303 + 1939283 1939323 41 ATGGTGATGGGTGACGTGACCTACGGGGCTTGCTGTGTGGA ATGGTGATGGGTGACGTGACCTATGGGGCTTGCTGTGTGGA < 41bp 0.724624054639975 0.519203985244436 0.014389932 0.021276534 prediction 0.410840138791076 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1939303 chr17:1939306 synonymous SNV . 0 24 hm5C_associated_SNPs_93894 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:1939291-1939313
64251 chr12 69145899 69145899 1 + G T LUSC 69145896 + 69145876 69145916 41 CGATGTCATCTGCCATGTTGCTGGTTGCTGTGCCCTTCTTT CGATGTCATCTGCCATGTTGCTGTTTGCTGTGCCCTTCTTT < 41bp 0.705418299702854 0.304051800105107 0.15227956 0.18725115 prediction 0.410836599405708 Functional Loss - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69145896 chr12:69145899 nonsynonymous SNV 0.317 0 24 hm5C_associated_SNPs_93896 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:69145892-69145917
64251 chr12 104709645 104709645 1 + G A UCEC 104709642 + 104709622 104709662 41 AGGACAAGCCCTGCAAGACTCTCGAAATTATGGATGGAAAG AGGACAAGCCCTGCAAGACTCTCAAAATTATGGATGGAAAG < 41bp 0.778920896286043 0.573502723166176 0.9047246 0.15593159 prediction 0.410836346239734 Functional Loss - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104709642 chr12:104709645 nonsynonymous SNV 0.761 1 24 hm5C_associated_SNPs_93897 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:104709558-104709664
64251 chr9 131243904 131243904 1 + C T PAAD 131243901 + 131243881 131243921 41 AACAAGGAGCACTGCTGAAACGGCTGGCGGAGGCCGACTCA AACAAGGAGCACTGCTGAAACGGTTGGCGGAGGCCGACTCA < 41bp 0.736342401888119 0.530924658462257 0.50883853 0.34115994 prediction 0.410835486851723 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131243901 chr9:131243904 synonymous SNV . 0 24 hm5C_associated_SNPs_93899 0 0 6 DDX24 POSTAR2 ENCODE chr9:131243867-131243937
64251 chr11 608472 608472 1 + A C COAD 608471 + 608451 608491 41 TCCCGCAGCAGGAAGAAGGCCAAGAGGAAGAGGGTGTCCAG TCCCGCAGCAGGAAGAAGGCCCAGAGGAAGAGGGTGTCCAG < 41bp 0.84262185083628 0.63720679562168 0.59221447 0.39754355 prediction 0.4108301104292 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608471 chr11:608472 nonsynonymous SNV 0.590 0 22 hm5C_associated_SNPs_93901 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr11:608471-608472
64251 chr11 60698120 60698120 1 + G T rs367930901 60698116 + 60698096 60698136 41 CTGCCACCGTGCTGGGCTCACAGAGCCAGATTCCAGGTGGG CTGCCACCGTGCTGGGCTCACAGATCCAGATTCCAGGTGGG < 41bp 0.716777315679022 0.511371877818797 0.87379175 0.3844248 prediction 0.41081087572045 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60698116 chr11:60698120 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_93909 0 0 1 BUD13 POSTAR2 ENCODE chr11:60698056-60698121
64251 chr9 35792472 35792472 1 + C T ESCA 35792470 + 35792450 35792490 41 TGGGGTGCGTCCTCCCGGGGCGCGGAACCTGACGCTGGCGG TGGGGTGCGTCCTCCCGGGGCGTGGAACCTGACGCTGGCGG < 41bp 0.807122353386107 0.601726664532627 0.6812339 0.4409307 prediction 0.41079137770696 Functional Loss - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792470 chr9:35792472 nonsynonymous SNV 0.991 3 23 hm5C_associated_SNPs_93915 0 0 5 CSTF2T POSTAR2 ENCODE chr9:35792434-35792505
64251 chr6 26124559 26124559 1 + C T LUSC 26124557 + 26124537 26124577 41 TCCCGGTGGGCCGAGTGCACCGCCTGCTCCGTAAAGGCAAC TCCCGGTGGGCCGAGTGCACCGTCTGCTCCGTAAAGGCAAC < 41bp 0.812614927968942 0.607219463780643 0.039155185 0.04136285 prediction 0.410790928376598 Functional Loss - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124557 chr6:26124559 synonymous SNV . 0 23 hm5C_associated_SNPs_93917 0 0 25 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26124400-26124560
64251 chr11 70172459 70172459 1 + C T UCEC 70172457 + 70172437 70172477 41 GAACAAGAAAATACACCAAGCACGAGTGGAAAGGCAAGTCT GAACAAGAAAATACACCAAGCATGAGTGGAAAGGCAAGTCT < 41bp 0.705393429207972 0.43180850501787 0.2209056 0.13652661 prediction 0.410786858415943 Functional Loss - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70172457 chr11:70172459 nonsynonymous SNV 0.053 0 23 hm5C_associated_SNPs_93920 0 0 1 ZNF622 POSTAR2 ENCODE chr11:70172421-70172467
64251 chr1 27269216 27269216 1 + C T rs534684686 27269213 + 27269193 27269233 41 AAACTGAAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAA AAACTGAAGCCCAACCTAGGCAATGGGGCAGACCTGCCCAA < 41bp 0.72959100621243 0.524200467496212 0.2211841 0.17905813 prediction 0.410781077432436 Functional Loss - NUDC ENSG00000090273 CDS Human protein_coding chr1:27269213 chr1:27269216 synonymous SNV . 0 24 hm5C_associated_SNPs_93924 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:27269208-27269255
64251 chr8 59361472 59361472 1 + C T rs116310847 59361470 + 59361450 59361490 41 GGAGTCCAGGTTAAGAGTTTCGCGGTGCCAAGATCAATTTG GGAGTCCAGGTTAAGAGTTTCGTGGTGCCAAGATCAATTTG < 41bp 0.77298452655957 0.567594195637872 0.6841372 0.629008 prediction 0.410780661843396 Functional Loss - UBXN2B ENSG00000215114 UTR3 Human protein_coding chr8:59361470 chr8:59361472 . . 0 23 hm5C_associated_SNPs_93925 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr8:59361405-59361485
64251 chr1 32636331 32636331 1 + C T SKCM 32636328 + 32636308 32636348 41 GCTTGGATAAAATTGAGTTTCTCCAGAGCCACGAGAACCAG GCTTGGATAAAATTGAGTTTCTCTAGAGCCACGAGAACCAG < 41bp 0.767218480366713 0.561828206123372 0.9564289 0.91328186 prediction 0.41078054848668 Functional Loss - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32636328 chr1:32636331 stopgain 1.000 1 24 hm5C_associated_SNPs_93926 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:32636313-32636336
64251 chr2 36706779 36706779 1 + C T rs146435632 36706776 + 36706756 36706796 41 CGCCACTGCGTTGCGACCGTCTGCGGACAGACCTGCACAAA CGCCACTGCGTTGCGACCGTCTGTGGACAGACCTGCACAAA < 41bp 0.705390135113729 0.483458486662999 0.66703093 0.32019904 prediction 0.410780270227458 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36706776 chr2:36706779 synonymous SNV . 0 24 hm5C_associated_SNPs_93927 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:36706770-36706793
64251 chr19 39899137 39899137 1 + G T SARC 39899135 + 39899115 39899155 41 TGCCGAAGGGCCACTCCTATCAGCGTCTGGGGGCCCTTGGG TGCCGAAGGGCCACTCCTATCATCGTCTGGGGGCCCTTGGG < 41bp 0.920825985309193 0.715437608503758 0.92162484 0.76806116 prediction 0.410776753610869 Functional Loss - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899135 chr19:39899137 nonsynonymous SNV 0.211 0 23 hm5C_associated_SNPs_93928 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr19:39899093-39899137
64251 chr4 48853837 48853837 1 + A C GBM 48853833 + 48853813 48853853 41 TCATTTACAGGCACTATTATCAAAAGTCAAAATATGACTCA TCATTTACAGGCACTATTATCAAACGTCAAAATATGACTCA < 41bp 0.705388330451167 0.309516679633904 0.33848423 0.35844433 prediction 0.410776660902333 Functional Loss - OCIAD1 ENSG00000109180 CDS Human protein_coding chr4:48853833 chr4:48853837 nonsynonymous SNV 0.333 0 25 hm5C_associated_SNPs_93929 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:48853823-48853848
64251 chr17 34900799 34900799 1 + G A rs553160456 34900796 + 34900776 34900816 41 GCGGCGCGAGCGGCTGACTGCCCGTAGAGGAAACGACATTC GCGGCGCGAGCGGCTGACTGCCCATAGAGGAAACGACATTC < 41bp 0.756705431326248 0.551319342355642 0.050819784 0.04664436 prediction 0.410772177941213 Functional Loss - GGNBP2 ENSG00000005955 UTR5 Human other chr17:34900796 chr17:34900799 . . 0 24 hm5C_associated_SNPs_93931 0 0 2 DDX3X POSTAR2 ENCODE chr17:34900761-34900917
64251 chr4 2906643 2906643 1 + G T LUSC 2906641 + 2906621 2906661 41 CCCCACTCAGACACAGTTTTCAGAAGCAGCAGCGGGAGAAG CCCCACTCAGACACAGTTTTCATAAGCAGCAGCGGGAGAAG < 41bp 0.70538325957954 0.36345582589826 0.9005652 0.16682759 prediction 0.41076651915908 Functional Loss - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2906641 chr4:2906643 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_93933 0 0 10 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr4:2906619-2906643
64251 chr9 100840602 100840602 1 + T C STAD 100840601 + 100840581 100840621 41 CAGCGCATACCCGCTCCAGCCTGAGGACGTCAACCTGCGGG CAGCGCATACCCGCTCCAGCCCGAGGACGTCAACCTGCGGG < 41bp 0.805900099653827 0.600517355931605 0.52233934 0.703438 prediction 0.410765487444445 Functional Loss - NANS ENSG00000095380 CDS Human protein_coding chr9:100840601 chr9:100840602 synonymous SNV . 0 22 hm5C_associated_SNPs_93934 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:100840585-100840602
64251 chr12 71833970 71833970 1 + A C rs141472970 71833969 + 71833949 71833989 41 TGCTGAGGGGCTGCCCCACACACTGTCATTGCGAGCCCGAC TGCTGAGGGGCTGCCCCACACCCTGTCATTGCGAGCCCGAC < 41bp 0.705382342523053 0.454199193262556 0.09750095 0.060830474 prediction 0.410764685046107 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71833969 chr12:71833970 nonsynonymous SNV 0.930 1 22 hm5C_associated_SNPs_93935 0 0 1 DDX3X POSTAR2 ENCODE chr12:71833938-71833985
64251 chr16 2043001 2043001 1 + G T GBM 2042998 + 2042978 2043018 41 GGCAGCGGCGTGGAGGGCACCGAGACCTACCAGAGCCCGCC GGCAGCGGCGTGGAGGGCACCGATACCTACCAGAGCCCGCC < 41bp 0.931154843512314 0.725775720788633 0.8647162 0.16849619 prediction 0.410758245447361 Functional Loss - SYNGR3 ENSG00000127561 CDS Human protein_coding chr16:2042998 chr16:2043001 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_93937 0 0 1 YBX3 POSTAR2 ENCODE chr16:2042913-2043007
64251 chr10 51582221 51582221 1 + A T LUSC 51582217 + 51582197 51582237 41 CTTGATGGCTCATGCTAGTTCAGCAAATATTGGGCCCTTCC CTTGATGGCTCATGCTAGTTCAGCTAATATTGGGCCCTTCC < 41bp 0.705376680821666 0.367898642788312 0.13287506 0.15342513 prediction 0.410753361643331 Functional Loss - NCOA4 ENSG00000138293 CDS Human other chr10:51582217 chr10:51582221 synonymous SNV . 0 25 hm5C_associated_SNPs_93939 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr10:51582186-51582239
64251 chr17 79988245 79988245 1 + C T UCEC 79988243 + 79988223 79988263 41 TGGCCGAGGTGAGCAGGGTGCGCGTGGAGCTGCAGGAGCAG TGGCCGAGGTGAGCAGGGTGCGTGTGGAGCTGCAGGAGCAG < 41bp 0.705375945250536 0.448019475860552 0.5850456 0.5403138 prediction 0.410751890501071 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79988243 chr17:79988245 synonymous SNV . 0 23 hm5C_associated_SNPs_93940 0 0 4 PPIG POSTAR2 ENCODE chr17:79988229-79988319
64251 chr19 42584799 42584799 1 + C T COAD 42584797 + 42584777 42584817 41 CAAGAAAGTGGGCTCAGCTGCTCGACTGCAGGCACACGAGG CAAGAAAGTGGGCTCAGCTGCTTGACTGCAGGCACACGAGG < 41bp 0.827318357396905 0.621944017151376 0.29461387 0.18770802 prediction 0.410748680491059 Functional Loss - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42584797 chr19:42584799 stopgain 0.982 1 23 hm5C_associated_SNPs_93941 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:42584782-42584809
64251 chr5 140769313 140769313 1 + C T GBM 140769311 + 140769291 140769331 41 CTCTTCAGCCTGGGGCTGCGCACGGGCGAAGTGCGCACAGC CTCTTCAGCCTGGGGCTGCGCATGGGCGAAGTGCGCACAGC < 41bp 0.717973992678253 0.512601109348568 0.8472345 0.8710284 prediction 0.410745766659372 Functional Loss - PCDHGB4 ENSG00000253953 CDS Human protein_coding chr5:140769311 chr5:140769313 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_93944 0 0 1 SND1 POSTAR2 ENCODE chr5:140769265-140769321
64251 chrX 47041673 47041673 1 + C T OV 47041671 + 47041651 47041691 41 CATAAGGAGACAGGGGCACCCTCGAAGGAGGGCAAAGAGAA CATAAGGAGACAGGGGCACCCTTGAAGGAGGGCAAAGAGAA < 41bp 0.87565965545495 0.670291974807708 0.87338674 0.211846 prediction 0.410735361294485 Functional Loss - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47041671 chrX:47041673 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_93946 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:47041651-47041674
64251 chr14 101351100 101351100 1 + A C COAD 101351096 + 101351076 101351116 41 TTCTTATGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGG TTCTTATGCTCCATCATCGTCTCACATGAGTCTTCAGAGGG < 41bp 0.70536486812529 0.313490363405186 0.2364952 0.01907289 prediction 0.410729736250579 Functional Loss - RTL1 ENSG00000254656 CDS Human protein_coding chr14:101351096 chr14:101351100 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_93948 0 0 18 ELAVL1 POSTAR2 GSE29943,GSM741173 chr14:101351080-101351100
64251 chr14 103574849 103574849 1 + C T LUSC 103574846 + 103574826 103574866 41 ACTCTTATCCGGAGCTACCCCGACATCAGGTGTGTACCCCA ACTCTTATCCGGAGCTACCCCGATATCAGGTGTGTACCCCA < 41bp 0.740909759512175 0.53554823395344 0.24672228 0.097668886 prediction 0.41072305111747 Functional Loss - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103574846 chr14:103574849 synonymous SNV . 0 24 hm5C_associated_SNPs_93951 0 0 2 GRWD1 POSTAR2 ENCODE chr14:103574806-103574861
64251 chr22 18899484 18899484 1 + G A rs10602 18899481 + 18899461 18899501 41 CCAACCTGCACTGGGGCCCACTCGAGCGCTTGTTCTGGTCT CCAACCTGCACTGGGGCCCACTCAAGCGCTTGTTCTGGTCT < 41bp 0.797035600012237 0.591678066593772 0.8596208 0.8554558 prediction 0.410715066836931 Functional Loss - DGCR6 ENSG00000183628 UTR3 Human protein_coding chr22:18899481 chr22:18899484 . . 0 24 hm5C_associated_SNPs_93956 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:18899480-18899533
64251 chr2 231334780 231334780 1 + G A UCEC 231334777 + 231334757 231334797 41 TGAGTAATGGAGAAGAGCTTCAGGAAACCTGCAGCTCATCC TGAGTAATGGAGAAGAGCTTCAGAAAACCTGCAGCTCATCC < 41bp 0.779927353238051 0.574571984914243 0.67363536 0.36991382 prediction 0.410710736647615 Functional Loss - SP100 ENSG00000067066 CDS Human protein_coding chr2:231334777 chr2:231334780 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_93957 0 0 2 ZNF622 POSTAR2 ENCODE chr2:231334729-231334866
64251 chr14 64921543 64921543 1 + G A LUSC 64921540 + 64921520 64921560 41 CAGGCTTCATTCTGCCCATTCGCGACATCCGCGCCAGCGTT CAGGCTTCATTCTGCCCATTCGCAACATCCGCGCCAGCGTT < 41bp 0.835082032167667 0.629726678938369 0.5624743 0.19542313 prediction 0.410710706458596 Functional Loss - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64921540 chr14:64921543 nonsynonymous SNV 0.304 3 24 hm5C_associated_SNPs_93958 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:64921506-64921544
64251 chr6 1395186 1395186 1 + G A rs113145019 1395183 + 1395163 1395203 41 ACGGATTCAAGTCACATGCACGCGGATAGCAGTAAGCCACA ACGGATTCAAGTCACATGCACGCAGATAGCAGTAAGCCACA < 41bp 0.792167960986578 0.586812965331199 0.37840453 0.27035242 prediction 0.410709991310758 Functional Loss - FOXF2 ENSG00000137273 UTR3 Human protein_coding chr6:1395183 chr6:1395186 . . 0 24 hm5C_associated_SNPs_93959 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:1395167-1395196
64251 chr7 64863921 64863921 1 + G A LUAD 64863918 + 64863898 64863938 41 GGCAAGGCCTTTAACCAGTTCTCGATTCTTAATAAACATAA GGCAAGGCCTTTAACCAGTTCTCAATTCTTAATAAACATAA < 41bp 0.748185760424299 0.542831222630266 0.10775468 0.06418562 prediction 0.410709075588067 Functional Loss - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64863918 chr7:64863921 synonymous SNV . 0 24 hm5C_associated_SNPs_93961 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr7:64863899-64863921
64251 chr6 4041056 4041056 1 + G A UCEC 4041053 + 4041033 4041073 41 CTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAA CTTGCGAAGGCGGTCTCGATCACACGGTGGTCGTAGACGAA < 41bp 0.705354269389689 0.463112966126907 0.53387886 0.26038495 prediction 0.410708538779379 Functional Loss - PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4041053 chr6:4041056 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_93962 0 0 14 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr6:4041040-4041060
64251 chr16 2258767 2258767 1 + G A rs11863256 2258764 + 2258744 2258784 41 CAATCTCCCCCTCCAGCTTCCTCGGACAACCTGGCCCGGCT CAATCTCCCCCTCCAGCTTCCTCAGACAACCTGGCCCGGCT < 41bp 0.705353902730452 0.467007477979152 0.7916135 0.21144754 prediction 0.410707805460903 Functional Loss - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258764 chr16:2258767 synonymous SNV . 0 24 hm5C_associated_SNPs_93964 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2258734-2258768
64251 chr5 6750547 6750547 1 + G T LUSC 6750543 + 6750523 6750563 41 TGGCCAGCGCTTGACTTTGTCGCTGTCCAGCCCCCAGCTCC TGGCCAGCGCTTGACTTTGTCGCTTTCCAGCCCCCAGCTCC < 41bp 0.70534885371775 0.498675948176686 0.3771028 0.21056387 prediction 0.4106977074355 Functional Loss - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6750543 chr5:6750547 synonymous SNV . 0 25 hm5C_associated_SNPs_93967 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:6750535-6750559
64251 chr1 10479692 10479692 1 + G T SARC 10479690 + 10479670 10479710 41 ACTCTCTCGTTTCCTAGGCTCAGCGGGATTACTTCGGGGCT ACTCTCTCGTTTCCTAGGCTCATCGGGATTACTTCGGGGCT < 41bp 0.705348230204303 0.357657833400935 0.8765829 0.29951733 prediction 0.410696460408605 Functional Loss - PGD ENSG00000142657 CDS Human protein_coding chr1:10479690 chr1:10479692 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_93968 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:10479690-10479727
64251 chr12 6494249 6494249 1 + G A UCEC 6494246 + 6494226 6494266 41 ACAGTTTGTGCCACATGTGCCGAGAATTCCTACAACGAGCA ACAGTTTGTGCCACATGTGCCGAAAATTCCTACAACGAGCA < 41bp 0.705338455175393 0.452575658948254 0.028268605 0.004633516 prediction 0.410676910350786 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6494246 chr12:6494249 synonymous SNV . 0 24 hm5C_associated_SNPs_93973 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:6494232-6494270
64251 chr1 19586334 19586334 1 + G A rs186446016 19586331 + 19586311 19586351 41 GAGCCAGCGTCTAAAGTGTCCACGGCATCCTGGGAGGTTTT GAGCCAGCGTCTAAAGTGTCCACAGCATCCTGGGAGGTTTT < 41bp 0.743586499714493 0.538251889581296 0.07695511 0.049430043 prediction 0.410669220266395 Functional Loss - MRTO4 ENSG00000053372 UTR3 Human protein_coding chr1:19586331 chr1:19586334 . . 0 24 hm5C_associated_SNPs_93978 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr1:19586304-19586363
64251 chr15 49620200 49620200 1 + C T rs1055254 49620197 + 49620177 49620217 41 ACTGGAGCAGGATGGGGAGGCTGCACAGTATCAATGGTACC ACTGGAGCAGGATGGGGAGGCTGTACAGTATCAATGGTACC < 41bp 0.752747062351058 0.547415367734389 0.6310405 0.598438 prediction 0.410663389233337 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49620197 chr15:49620200 synonymous SNV . 0 24 hm5C_associated_SNPs_93982 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:49620190-49620212
64251 chr12 49888776 49888776 1 + G A rs151243398 49888773 + 49888753 49888793 41 AGTCTGCCATGCTAGATACGCTGGATAGAACAGGTGAGTTT AGTCTGCCATGCTAGATACGCTGAATAGAACAGGTGAGTTT < 41bp 0.799172264306719 0.593847264278412 0.5440843 0.18788394 prediction 0.410650000056614 Functional Loss - SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49888773 chr12:49888776 nonsynonymous SNV 0.331 1 24 hm5C_associated_SNPs_93990 0 0 2 GRWD1 POSTAR2 ENCODE chr12:49888725-49888781
64251 chr9 35842555 35842555 1 + G A COAD 35842552 + 35842532 35842572 41 GAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCT GAGCACTGCTGGCCAGTGCGCCCAACTCTGCGCAACGAGCT < 41bp 0.705324129661811 0.454149393947393 0.12092084 0.09867966 prediction 0.410648259323621 Functional Loss - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35842552 chr9:35842555 synonymous SNV . 0 24 hm5C_associated_SNPs_93992 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35842516-35842555
64251 chr3 52233435 52233435 1 + G T UCEC 52233431 + 52233411 52233451 41 GCAGTACACTACCAACAGATCAAAGAAACCCCTCCGGCCAG GCAGTACACTACCAACAGATCAAATAAACCCCTCCGGCCAG < 41bp 0.705322587396128 0.488800431740612 0.6619218 0.59599036 prediction 0.410645174792255 Functional Loss - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233431 chr3:52233435 stopgain 0.999 0 25 hm5C_associated_SNPs_93993 0 0 1 PRPF8 POSTAR2 ENCODE chr3:52233434-52233481
64251 chr1 28920464 28920464 1 + C T rs370993430 28920461 + 28920441 28920481 41 GAGACCTCGGTTAAAAACAACTGCAATGTGGACCTGGCCTT GAGACCTCGGTTAAAAACAACTGTAATGTGGACCTGGCCTT < 41bp 0.754538451950619 0.549217554412793 0.27843308 0.32426155 prediction 0.410641795075653 Functional Loss - RAB42 ENSG00000188060 CDS Human protein_coding chr1:28920461 chr1:28920464 synonymous SNV . 0 24 hm5C_associated_SNPs_93995 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:28920450-28920491
64251 chr5 175722114 175722114 1 + G T UCEC 175722111 + 175722091 175722131 41 CCATTGAAGAGAATTTTCCTCTGGGGACTGTGCAGTTTTTG CCATTGAAGAGAATTTTCCTCTGTGGACTGTGCAGTTTTTG < 41bp 0.705317298236152 0.312449684367899 0.23129246 0.09330979 prediction 0.410634596472303 Functional Loss - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175722111 chr5:175722114 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_93997 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:175722096-175722131
64251 chr11 114182933 114182933 1 + T C rs552025341 114182932 + 114182912 114182952 41 TGCCCAGACCTCCCCACCTACTGCAGGGCGCTCAGGAACCT TGCCCAGACCTCCCCACCTACCGCAGGGCGCTCAGGAACCT < 41bp 0.852281006045133 0.646965405315983 0.13957027 0.21423084 prediction 0.410631201458301 Functional Loss - NNMT ENSG00000166741 CDS Human protein_coding chr11:114182932 chr11:114182933 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_93999 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:114182913-114182933
64251 chr1 249211080 249211080 1 + G A UCEC 249211077 + 249211057 249211097 41 GACCTGGAGCTGCAGCCAGCCAAGAAGAGGCAGAAAGCAGT GACCTGGAGCTGCAGCCAGCCAAAAAGAGGCAGAAAGCAGT < 41bp 0.79029198672733 0.584978583188598 0.40003094 0.60635257 prediction 0.410626807077464 Functional Loss - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249211077 chr1:249211080 synonymous SNV . 0 24 hm5C_associated_SNPs_94000 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:249211079-249211080
64251 chr9 17298312 17298312 1 + G T LUAD 17298309 + 17298289 17298329 41 CACAAAAAGTACTGAGAAATCAGGAAGATGTTCACACAGCT CACAAAAAGTACTGAGAAATCAGTAAGATGTTCACACAGCT < 41bp 0.705308985366826 0.347359388611966 0.8813168 0.3370853 prediction 0.410617970733653 Functional Loss - CNTLN ENSG00000044459 CDS Human protein_coding chr9:17298309 chr9:17298312 stopgain 1.000 0 24 hm5C_associated_SNPs_94006 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:17298281-17298333
64251 chr19 54618995 54618995 1 - C T rs138038600 54618998 - 54618978 54619018 41 CGGAGAGAGGCGGTAAGCCGCGAGGAGGAAAGGGACTCACG CGGAGAGAGGCGGTAAGCCGCGAAGAGGAAAGGGACTCACG < 41bp 0.798131335830978 0.592824119751782 0.91227996 0.8666241 prediction 0.41061443215839 Functional Loss - PRPF31;TFPT ENSG00000105618;ENSG00000105619 UTR5 Human other chr19:54618998 chr19:54618995 . . 0 24 hm5C_associated_SNPs_94009 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:54618995-54618996
64251 chr1 168153312 168153312 1 + G A READ 168153309 + 168153289 168153329 41 TGGCCTGTGCTGAAGAGTGGCAAGAAAGCAGGTGAGAATCC TGGCCTGTGCTGAAGAGTGGCAAAAAAGCAGGTGAGAATCC < 41bp 0.768039786002611 0.562733699410123 0.51924336 0.18422139 prediction 0.410612173184976 Functional Loss - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168153309 chr1:168153312 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_94011 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:168153251-168153312
64251 chr11 82643789 82643789 1 + G A COAD 82643786 + 82643766 82643806 41 TGTGACTCCCCAGAGAACTACTGGAGCCCTGCATACACCAC TGTGACTCCCCAGAGAACTACTGAAGCCCTGCATACACCAC < 41bp 0.798912470639153 0.593608655447849 0.8677907 0.7109964 prediction 0.410607630382609 Functional Loss - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82643786 chr11:82643789 nonsynonymous SNV 0.513 0 24 hm5C_associated_SNPs_94013 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:82643778-82643812
64251 chr6 148855979 148855979 1 + G A LUSC 148855976 + 148855956 148855996 41 GACTTGGATGAGTTAAATATCAGGGACCCGGAACACAGAGC GACTTGGATGAGTTAAATATCAGAGACCCGGAACACAGAGC < 41bp 0.705300778878697 0.463529133711478 0.9330061 0.9157764 prediction 0.410601557757394 Functional Loss - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148855976 chr6:148855979 synonymous SNV . 0 24 hm5C_associated_SNPs_94014 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr6:148855967-148855992
64251 chr14 103599776 103599776 1 + G A SKCM 103599773 + 103599753 103599793 41 AGCAAGGGGCGCCTGGTCCTCAAGACGGCCGAGCAGCAGCA AGCAAGGGGCGCCTGGTCCTCAAAACGGCCGAGCAGCAGCA < 41bp 0.826280509364395 0.620986537919445 0.5340809 0.3624704 prediction 0.410587942889901 Functional Loss - TNFAIP2 ENSG00000185215 CDS Human protein_coding chr14:103599773 chr14:103599776 synonymous SNV . 0 24 hm5C_associated_SNPs_94022 0 0 2 DDX24 POSTAR2 ENCODE chr14:103599767-103599785
64251 chr2 65299109 65299109 1 + G A UCEC 65299106 + 65299086 65299126 41 CCCGACCGCCACTCCCCTCTCTGGAACCCAAATAAAGAGTA CCCGACCGCCACTCCCCTCTCTGAAACCCAAATAAAGAGTA < 41bp 0.815867767067492 0.610573904669021 0.38039222 0.20494774 prediction 0.410587724796942 Functional Loss - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65299106 chr2:65299109 stopgain 0.999 1 24 hm5C_associated_SNPs_94023 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:65299059-65299121
64251 chr7 99971833 99971833 1 + C T STAD 99971830 + 99971810 99971850 41 TCCTGGAGACGGGGCCACTTCCACAGGCAGTCCTTCTACAG TCCTGGAGACGGGGCCACTTCCATAGGCAGTCCTTCTACAG < 41bp 0.763094538090502 0.557802116725112 0.5900961 0.8738843 prediction 0.41058484273078 Functional Loss - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971830 chr7:99971833 synonymous SNV . 0 24 hm5C_associated_SNPs_94024 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99971805-99971835
64251 chr20 49576254 49576254 1 + G T THYM 49576250 + 49576230 49576270 41 ATTTCCGCTCTATTCGGCTGCGGAGCCGCAGGCTCGACTGT ATTTCCGCTCTATTCGGCTGCGGATCCGCAGGCTCGACTGT < 41bp 0.705291355418985 0.487270228041698 0.91113603 0.47794715 prediction 0.41058271083797 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49576250 chr20:49576254 nonsynonymous SNV 0.731 0 25 hm5C_associated_SNPs_94025 0 0 2 RBM15 POSTAR2 ENCODE chr20:49576230-49576289
64251 chr3 67054667 67054667 1 + G C LUAD 67054666 + 67054646 67054686 41 AATTGTTGGACGACTGTTTGCGCGATGCCAGTTGCAATGGA AATTGTTGGACGACTGTTTGCCCGATGCCAGTTGCAATGGA < 41bp 0.884479504554651 0.679189851453037 0.43513274 0.15308401 prediction 0.410579306203228 Functional Loss - KBTBD8 ENSG00000163376 CDS Human protein_coding chr3:67054666 chr3:67054667 nonsynonymous SNV 0.134 1 22 hm5C_associated_SNPs_94030 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:67054650-67054676
64251 chr16 28967500 28967500 1 + C T UCEC 28967497 + 28967477 28967517 41 TGAACAAGCGCCTCCAGGATCTCCGTTCCTGTCTGAGCCCC TGAACAAGCGCCTCCAGGATCTCTGTTCCTGTCTGAGCCCC < 41bp 0.778510945312281 0.573226883649132 0.51096714 0.23260641 prediction 0.410568123326298 Functional Loss - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28967497 chr16:28967500 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_94033 0 0 6 PPIG POSTAR2 ENCODE chr16:28967474-28967587
64251 chr17 40639358 40639358 1 + C T KIRC 40639355 + 40639335 40639375 41 TGCCCTGTCACCGACCTTGACTCCATCCAGTTTGCACTCAG TGCCCTGTCACCGACCTTGACTCTATCCAGTTTGCACTCAG < 41bp 0.810766063312407 0.605482740331145 0.95096684 0.9333395 prediction 0.410566645962524 Functional Loss - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40639355 chr17:40639358 synonymous SNV . 0 24 hm5C_associated_SNPs_94034 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:40639316-40639372
64251 chr15 41794294 41794294 1 + G A STAD 41794291 + 41794271 41794311 41 GCGGTGGATCCTGAAGCTCCCACGGAGGAGGAGCACGCGCA GCGGTGGATCCTGAAGCTCCCACAGAGGAGGAGCACGCGCA < 41bp 0.81829480111074 0.613013186238267 0.8187804 0.30485272 prediction 0.410563229744948 Functional Loss - ITPKA ENSG00000137825 CDS Human protein_coding chr15:41794291 chr15:41794294 synonymous SNV . 0 24 hm5C_associated_SNPs_94038 0 0 3 GRWD1 POSTAR2 ENCODE chr15:41794256-41794315
64251 chr7 127231035 127231035 1 + C T UCEC 127231032 + 127231012 127231052 41 CTCAGCTGCAGGAGGACGAGCTGCGGGATGCAGTGCTGCTG CTCAGCTGCAGGAGGACGAGCTGTGGGATGCAGTGCTGCTG < 41bp 0.749967827331382 0.544697057805575 0.762618 0.7786895 prediction 0.410541539051615 Functional Loss - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231032 chr7:127231035 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_94046 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:127231020-127231056
64251 chr5 148745541 148745541 1 + G T LUAD 148745538 + 148745518 148745558 41 CAGGCCCACGGCTATGCCTTCTCGGGTGTGGAGGAGCTGCT CAGGCCCACGGCTATGCCTTCTCTGGTGTGGAGGAGCTGCT < 41bp 0.705266425083622 0.304805802157935 0.09030771 0.23880622 prediction 0.410532850167244 Functional Loss - PCYOX1L ENSG00000145882 CDS Human protein_coding chr5:148745538 chr5:148745541 synonymous SNV . 0 24 hm5C_associated_SNPs_94053 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:148745509-148745559
64251 chr11 63676447 63676447 1 + C T UCEC 63676445 + 63676425 63676465 41 TTCACGTGGAGTATGAAGACCACGAGCTCCATGGAGCCCAA TTCACGTGGAGTATGAAGACCATGAGCTCCATGGAGCCCAA < 41bp 0.854351619338487 0.649098139393985 0.32466367 0.21063101 prediction 0.410506959889003 Functional Loss - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63676445 chr11:63676447 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_94059 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:63676442-63676467
64251 chr5 140049152 140049152 1 + C T UCEC 140049149 + 140049129 140049169 41 CTGAGCAGCAAGACTTGGAGCACCGATGACTTCTTCGCAGG CTGAGCAGCAAGACTTGGAGCACTGATGACTTCTTCGCAGG < 41bp 0.713510760041234 0.50825756550736 0.11693701 0.11958665 prediction 0.410506389067748 Functional Loss - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140049149 chr5:140049152 synonymous SNV . 0 24 hm5C_associated_SNPs_94060 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:140049108-140049164
64251 chr20 54940178 54940178 1 + C T rs538728588 54940175 + 54940155 54940195 41 GCCACGGGGACAACAGGCAGCAGCGTCAGCTGCACAGAGGA GCCACGGGGACAACAGGCAGCAGTGTCAGCTGCACAGAGGA < 41bp 0.711957302722949 0.506704845134753 0.5175044 0.36814737 prediction 0.410504915176391 Functional Loss - FAM210B ENSG00000124098 CDS Human protein_coding chr20:54940175 chr20:54940178 synonymous SNV . 0 24 hm5C_associated_SNPs_94061 0 0 3 BUD13 POSTAR2 ENCODE chr20:54940127-54940192
64251 chr1 207818618 207818618 1 + C T rs61739989 207818616 + 207818596 207818636 41 TCTCGAGCGTCCCTTTCCTTCCCGGCGCTTTCCTGGGTTGC TCTCGAGCGTCCCTTTCCTTCCTGGCGCTTTCCTGGGTTGC < 41bp 0.705250835109282 0.481226140657074 0.8641734 0.176164 prediction 0.410501670218564 Functional Loss - CR1L ENSG00000197721 CDS Human protein_coding chr1:207818616 chr1:207818618 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_94063 0 0 1 RPS3 POSTAR2 ENCODE chr1:207818608-207818715
64251 chr1 207818619 207818619 1 + G A STAD 207818616 + 207818596 207818636 41 TCTCGAGCGTCCCTTTCCTTCCCGGCGCTTTCCTGGGTTGC TCTCGAGCGTCCCTTTCCTTCCCAGCGCTTTCCTGGGTTGC < 41bp 0.705250835109282 0.451174731759727 0.8641734 0.62068564 prediction 0.410501670218564 Functional Loss - CR1L ENSG00000197721 CDS Human protein_coding chr1:207818616 chr1:207818619 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_94064 0 0 1 RPS3 POSTAR2 ENCODE chr1:207818608-207818715
64251 chr6 135516944 135516944 1 + C T rs2229999 135516942 + 135516922 135516962 41 AGCACCACCATTGCCGACCACACCAGACCTCATGGAGACAG AGCACCACCATTGCCGACCACATCAGACCTCATGGAGACAG < 41bp 0.83269691924874 0.627451705676238 0.15689293 0.23317549 prediction 0.410490427145004 Functional Loss - MYB ENSG00000118513 CDS Human protein_coding chr6:135516942 chr6:135516944 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_94066 0 0 1 U2AF2 POSTAR2 ENCODE chr6:135516853-135516954
64251 chr6 53778706 53778706 1 + C T UCEC 53778704 + 53778684 53778724 41 TGTACGTGACAACAGACTAACTCGGATACCTGCAGAGGTGT TGTACGTGACAACAGACTAACTTGGATACCTGCAGAGGTGT < 41bp 0.705244584967506 0.407374706060781 0.23182726 0.22043654 prediction 0.410489169935013 Functional Loss - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53778704 chr6:53778706 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_94067 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:53778702-53778712
64251 chr19 12924403 12924403 1 + G A rs533069935 12924400 + 12924380 12924420 41 GTGGGAGTGTGCTCTGCAGCCGGGTCCAGCTACTTCCTTTT GTGGGAGTGTGCTCTGCAGCCGGATCCAGCTACTTCCTTTT < 41bp 0.777788292873541 0.572544709389264 0.7690136 0.7236748 prediction 0.410487166968554 Functional Loss - RNASEH2A ENSG00000104889 UTR3 Human protein_coding chr19:12924400 chr19:12924403 . . 0 24 hm5C_associated_SNPs_94069 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:12924324-12924410
64251 chr1 154229706 154229706 1 + G A BLCA 154229703 + 154229683 154229723 41 AGCAACTCCACTGTCACAGCCTCGACTCGAAGCTCAGTTGC AGCAACTCCACTGTCACAGCCTCAACTCGAAGCTCAGTTGC < 41bp 0.812773752822406 0.607531833840279 0.3872309 0.0106111765 prediction 0.410483837964255 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229703 chr1:154229706 synonymous SNV . 0 24 hm5C_associated_SNPs_94072 0 0 7 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:154229684-154229706
64251 chr6 26217395 26217395 1 + G C BRCA 26217391 + 26217371 26217411 41 GAATATCTGACGGCCGAGATCTTAGAGCTAGCTGGCAACGC GAATATCTGACGGCCGAGATCTTACAGCTAGCTGGCAACGC < 41bp 0.705241542554824 0.432905402927337 0.5787919 0.53917545 prediction 0.410483085109649 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217391 chr6:26217395 nonsynonymous SNV 0.800 1 25 hm5C_associated_SNPs_94073 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26217359-26217397
64251 chr2 73477030 73477030 1 + G A COAD 73477027 + 73477007 73477047 41 TGCCAGGTGTTTGAAGAGACCCAGATTGGAGGCGAGAGGTG TGCCAGGTGTTTGAAGAGACCCAAATTGGAGGCGAGAGGTG < 41bp 0.824779144990302 0.619540677355242 0.091991186 0.043579757 prediction 0.410476935270119 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477027 chr2:73477030 synonymous SNV . 0 24 hm5C_associated_SNPs_94075 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476952-73477042
64251 chr19 47258781 47258781 1 + C T HNSC 47258779 + 47258759 47258799 41 CTTCTGGTCCTCTTCTATGTCTCGTGGCTGCAGCACCAGCC CTTCTGGTCCTCTTCTATGTCTTGTGGCTGCAGCACCAGCC < 41bp 0.841234118261244 0.635996088677714 0.12280387 0.1740259 prediction 0.41047605916706 Functional Loss - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258779 chr19:47258781 nonsynonymous SNV 0.945 3 23 hm5C_associated_SNPs_94076 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:47258765-47258788
64251 chr10 27459497 27459497 1 + G A UCEC 27459494 + 27459474 27459514 41 CAAAAAACCTTATGTGTGAACTCGATGAAGACTGTGAAAAG CAAAAAACCTTATGTGTGAACTCAATGAAGACTGTGAAAAG < 41bp 0.74693749173548 0.541703246498053 0.060922056 0.05996415 prediction 0.410468490474855 Functional Loss - MASTL ENSG00000120539 CDS Human protein_coding chr10:27459494 chr10:27459497 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_94078 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:27459465-27459523
64251 chr1 181019202 181019202 1 + C T rs61731104 181019199 + 181019179 181019219 41 GAGCTGCTGGAGGATGGAAGCACCACAGGATTTCTGCAGTA GAGCTGCTGGAGGATGGAAGCACTACAGGATTTCTGCAGTA < 41bp 0.770552023413354 0.565321135768711 0.18630728 0.7522159 prediction 0.410461775289285 Functional Loss - MR1 ENSG00000153029 CDS Human protein_coding chr1:181019199 chr1:181019202 synonymous SNV . 0 24 hm5C_associated_SNPs_94079 0 0 2 SND1 POSTAR2 ENCODE chr1:181019184-181019417
64251 chr3 57291297 57291297 1 + G A UCEC 57291294 + 57291274 57291314 41 ACAATCTCGGCCACCGACAGCTCGAACCAGCAGTTCAGGAT ACAATCTCGGCCACCGACAGCTCAAACCAGCAGTTCAGGAT < 41bp 0.705217748904016 0.472308459452184 0.2007778 0.39640883 prediction 0.410435497808032 Functional Loss - APPL1 ENSG00000157500 CDS Human protein_coding chr3:57291294 chr3:57291297 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_94088 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:57291285-57291307
64251 chr3 191098047 191098047 1 + A T HNSC 191098043 + 191098023 191098063 41 ATGCTGAAATTGCCAGAAAACTGCAAGAAGAAGAACTTTTG ATGCTGAAATTGCCAGAAAACTGCTAGAAGAAGAACTTTTG < 41bp 0.705198089375188 0.362993735058002 0.18675792 0.18743211 prediction 0.410396178750376 Functional Loss - CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191098043 chr3:191098047 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_94097 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:191098010-191098048
64251 chr1 154245986 154245986 1 + C T UCEC 154245984 + 154245964 154246004 41 CAGGAGGAGGGATACGTTTCCACGATAACTTCGGCTTTGAT CAGGAGGAGGGATACGTTTCCATGATAACTTCGGCTTTGAT < 41bp 0.795002753386174 0.589806093354747 0.20318466 0.18138137 prediction 0.410393320062853 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154245984 chr1:154245986 synonymous SNV . 0 23 hm5C_associated_SNPs_94100 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221664 chr1:154245980-154246000
64251 chr11 121466457 121466457 1 + G A SKCM 121466454 + 121466434 121466474 41 GTGACGGCCACCAAGATTGCCAGGATGGCCGGGACGAGGCC GTGACGGCCACCAAGATTGCCAGAATGGCCGGGACGAGGCC < 41bp 0.705193959837418 0.466101214435639 0.8410391 0.7461247 prediction 0.410387919674836 Functional Loss - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121466454 chr11:121466457 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_94101 0 0 4 LIN28B POSTAR2 ENCODE chr11:121466449-121466482
64251 chr9 132982079 132982079 1 + C T UCEC 132982076 + 132982056 132982096 41 GGGGAACCCTGGATGAGAAGCTACGGTGTAAGTCCTGCCCC GGGGAACCCTGGATGAGAAGCTATGGTGTAAGTCCTGCCCC < 41bp 0.740719711940738 0.535530748509921 0.42639336 0.29612175 prediction 0.410377926861635 Functional Loss - NCS1 ENSG00000107130 CDS Human protein_coding chr9:132982076 chr9:132982079 nonsynonymous SNV 0.968 3 24 hm5C_associated_SNPs_94106 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr9:132982078-132982079
64251 chr12 6948210 6948210 1 + G A LUAD 6948207 + 6948187 6948227 41 GCGCCTTGTGGCCTTCAGCTCCGGTGTCGAGAATCCCCATG GCGCCTTGTGGCCTTCAGCTCCGATGTCGAGAATCCCCATG < 41bp 0.705186403666498 0.451589185917921 0.86517787 0.41796315 prediction 0.410372807332995 Functional Loss - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6948207 chr12:6948210 nonsynonymous SNV 0.942 3 24 hm5C_associated_SNPs_94108 0 0 1 NOL12 POSTAR2 ENCODE chr12:6948156-6948307
64251 chr10 65383229 65383229 1 + G A rs79117611 65383226 + 65383206 65383246 41 TCCTCTGCCAGCACATGGAGCACGGGATTAGATGCACAAAC TCCTCTGCCAGCACATGGAGCACAGGATTAGATGCACAAAC < 41bp 0.705180156707198 0.477895005150755 0.63366216 0.10303444 prediction 0.410360313414396 Functional Loss - REEP3 ENSG00000165476 UTR3 Human protein_coding chr10:65383226 chr10:65383229 . . 0 24 hm5C_associated_SNPs_94111 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:65383163-65383236
64251 chr5 76332437 76332437 1 + T C LIHC 76332436 + 76332416 76332456 41 CTTAGAAGGCTCATCATTAGCTGAAAGTTTGAGAGCTGCAG CTTAGAAGGCTCATCATTAGCCGAAAGTTTGAGAGCTGCAG < 41bp 0.827022240955903 0.621842145471391 0.20703772 0.23457766 prediction 0.410360190969024 Functional Loss - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76332436 chr5:76332437 synonymous SNV . 0 22 hm5C_associated_SNPs_94112 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:76332420-76332448
64251 chr16 71884944 71884944 1 + C T COAD 71884942 + 71884922 71884962 41 TCAGGCCTGCTGCCTGTGGGCTCGGAGATCCTGGTAGCATC TCAGGCCTGCTGCCTGTGGGCTTGGAGATCCTGGTAGCATC < 41bp 0.705178107325655 0.43012208043116 0.22886756 0.13445759 prediction 0.410356214651309 Functional Loss - ATXN1L ENSG00000224470 CDS Human protein_coding chr16:71884942 chr16:71884944 nonsynonymous SNV 0.983 0 23 hm5C_associated_SNPs_94115 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:71884923-71884948
64251 chr22 17984030 17984030 1 + C T LUSC 17984027 + 17984007 17984047 41 GAGGACTTCCTGCCTGAGATCTGCAACATGATCGCCCAGAA GAGGACTTCCTGCCTGAGATCTGTAACATGATCGCCCAGAA < 41bp 0.770411354139475 0.565236271489686 0.3413891 0.28107947 prediction 0.410350165299578 Functional Loss - CECR2 ENSG00000099954 CDS Human protein_coding chr22:17984027 chr22:17984030 synonymous SNV . 0 24 hm5C_associated_SNPs_94121 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:17983995-17984030
64251 chr13 113976673 113976673 1 + C T BLCA 113976670 + 113976650 113976690 41 GGTGCCCTGGCGGGGCTGGTCCTCATCGTCCTCATCGCCTA GGTGCCCTGGCGGGGCTGGTCCTTATCGTCCTCATCGCCTA < 41bp 0.731349079909812 0.526174943251427 0.01945898 0.01742205 prediction 0.410348273316771 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113976670 chr13:113976673 synonymous SNV . 0 24 hm5C_associated_SNPs_94122 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:113976615-113976676
64251 chr1 210006627 210006627 1 + C T ESCA 210006625 + 210006605 210006645 41 AAGAGTTCACAGATGCAAAACACGAGTCACTGTTCAGCCTG AAGAGTTCACAGATGCAAAACATGAGTCACTGTTCAGCCTG < 41bp 0.82016441937524 0.615001805356129 0.05001062 0.045915097 prediction 0.410325228038222 Functional Loss - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210006625 chr1:210006627 synonymous SNV . 0 23 hm5C_associated_SNPs_94127 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210006616-210006641
64251 chr2 73471716 73471716 1 + G T ESCA 73471712 + 73471692 73471732 41 AAAAGTGTGCCATGACCGCTCTGAGCTCCAAGCTGATCTCC AAAAGTGTGCCATGACCGCTCTGATCTCCAAGCTGATCTCC < 41bp 0.705162375707257 0.490725277141286 0.22015446 0.04643163 prediction 0.410324751414513 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471712 chr2:73471716 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_94128 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:73471678-73471738
64251 chr16 90106768 90106768 1 + C T STAD 90106765 + 90106745 90106785 41 CCGCAGCCATCCAGGAGGTGCAGCAGAAGACAGGGTTCAAG CCGCAGCCATCCAGGAGGTGCAGTAGAAGACAGGGTTCAAG < 41bp 0.705160715516284 0.483487253461609 0.8874978 0.8053702 prediction 0.410321431032569 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90106765 chr16:90106768 stopgain 1.000 1 24 hm5C_associated_SNPs_94130 0 0 2 BUD13 POSTAR2 ENCODE chr16:90106653-90106787
64251 chr2 203139896 203139896 1 + G A LUSC 203139893 + 203139873 203139913 41 TATGGAAAGAATTTGAAACTCCAGAGAAAGCAAACAAAATG TATGGAAAGAATTTGAAACTCCAAAGAAAGCAAACAAAATG < 41bp 0.714784988237594 0.50962449570957 0.35272777 0.26596475 prediction 0.410320985056047 Functional Loss - NOP58 ENSG00000055044 CDS Human protein_coding chr2:203139893 chr2:203139896 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_94131 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:203139833-203139896
64251 chrX 129546805 129546805 1 + G T LUSC 129546801 + 129546781 129546821 41 GAGCGGGAGTCTTCGAATCCCAGTGACCGTTGGCGTCACTG GAGCGGGAGTCTTCGAATCCCAGTTACCGTTGGCGTCACTG < 41bp 0.707074236974158 0.501918917760127 0.18313453 0.122496486 prediction 0.410310638428063 Functional Loss - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546801 chrX:129546805 nonsynonymous SNV 0.075 0 25 hm5C_associated_SNPs_94135 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:129546684-129546848
64251 chr18 9954096 9954096 1 + G T UCEC 9954093 + 9954073 9954113 41 GGTAGCACATTCGGATAAACCTGGATCAACCTCAACTGCAT GGTAGCACATTCGGATAAACCTGTATCAACCTCAACTGCAT < 41bp 0.92692017339133 0.721772422296386 0.23800063 0.08379033 prediction 0.410295502189889 Functional Loss - VAPA ENSG00000101558 CDS Human protein_coding chr18:9954093 chr18:9954096 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_94138 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9954040-9954099
64251 chr9 110084315 110084315 1 + G T LUAD 110084313 + 110084293 110084333 41 TGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTC TGTGGTTGACCCCCCTCAAGCATCTAGTACTGGGGCTCCTC < 41bp 0.705142531165987 0.348943599499243 0.8662412 0.15023673 prediction 0.410285062331975 Functional Loss - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110084313 chr9:110084315 nonsynonymous SNV 0.364 0 23 hm5C_associated_SNPs_94140 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:110084315-110084351
64251 chr9 140083666 140083666 1 + T C BLCA 140083665 + 140083645 140083685 41 CCTGGCACGCAAGATTGCCTCTCGCAACGAGTTCGACCGGA CCTGGCACGCAAGATTGCCTCCCGCAACGAGTTCGACCGGA < 41bp 0.705128921660292 0.457333908766527 0.3594744 0.10155526 prediction 0.410257843320583 Functional Loss - SSNA1 ENSG00000176101 CDS Human protein_coding chr9:140083665 chr9:140083666 synonymous SNV . 0 22 hm5C_associated_SNPs_94144 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:140083657-140083691
64251 chr6 35263057 35263057 1 + G A rs73745179 35263054 + 35263034 35263074 41 GGGCTGGGTCCCACACCATGCTGGAGGAAGTGCCATCTGCA GGGCTGGGTCCCACACCATGCTGAAGGAAGTGCCATCTGCA < 41bp 0.783354386740661 0.578226941200294 0.20533046 0.16489747 prediction 0.410254891080734 Functional Loss - ZNF76 ENSG00000065029 UTR3 Human protein_coding chr6:35263054 chr6:35263057 . . 0 24 hm5C_associated_SNPs_94145 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:35263057-35263091
64251 chr18 63477091 63477091 1 + G T LUAD 63477087 + 63477067 63477107 41 AGGAGCAGGCCTACTACACGCTCCGAGCTCAAGCGCTGGAT AGGAGCAGGCCTACTACACGCTCCTAGCTCAAGCGCTGGAT < 41bp 0.718930291893336 0.513807657887788 0.00848639 0.0026277602 prediction 0.410245268011097 Functional Loss - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63477087 chr18:63477091 nonsynonymous SNV 0.728 2 25 hm5C_associated_SNPs_94150 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:63477072-63477099
64251 chr16 843198 843198 1 + C T STAD 843196 + 843176 843216 41 CGTGCGGGACGTGCAGGCCACACGCGTGGGCCTCAAGGACC CGTGCGGGACGTGCAGGCCACATGCGTGGGCCTCAAGGACC < 41bp 0.705120451618379 0.455858189948682 0.27400106 0.4527228 prediction 0.410240903236759 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:843196 chr16:843198 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_94152 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr16:843183-843209
64251 chr12 57962799 57962799 1 + C T PRAD 57962796 + 57962776 57962816 41 CTGGACGAGGCAAAGAATATCAACAAGTCACTGTCAGCTCT CTGGACGAGGCAAAGAATATCAATAAGTCACTGTCAGCTCT < 41bp 0.752566861043185 0.547453575936696 0.032067508 0.064706415 prediction 0.410226570212978 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57962796 chr12:57962799 synonymous SNV . 0 24 hm5C_associated_SNPs_94157 0 0 3 DDX24 POSTAR2 ENCODE chr12:57962745-57962849
64251 chr12 53776218 53776218 1 + G T GBM 53776216 + 53776196 53776236 41 ACAGAACCAGCAAGTTCTGACAGGACTACCTGGAGTGATGC ACAGAACCAGCAAGTTCTGACATGACTACCTGGAGTGATGC < 41bp 0.705112132409072 0.34779485275835 0.36296266 0.06728119 prediction 0.410224264818143 Functional Loss - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776216 chr12:53776218 stopgain 0.999 0 23 hm5C_associated_SNPs_94158 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53776200-53776220
64251 chr16 1825360 1825360 1 + C T CESC 1825358 + 1825338 1825378 41 GGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGA GGGACACAGCAGCCAGAGAGCCTGAAGGTGGCCGGTGCCGA < 41bp 0.824148774201944 0.619043766805424 0.36151722 0.2960121 prediction 0.410210014793039 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825358 chr16:1825360 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_94163 0 0 8 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr1 161293426 161293426 1 + C T LUSC 161293423 + 161293403 161293443 41 GACACGTTGGTCGTCATTGCCTCCGAGCCCACTTTAGCCCT GACACGTTGGTCGTCATTGCCTCTGAGCCCACTTTAGCCCT < 41bp 0.731776304004894 0.526671600560854 0.8480871 0.3225898 prediction 0.410209406888081 Functional Loss - SDHC ENSG00000143252 CDS Human protein_coding chr1:161293423 chr1:161293426 stopgain 0.989 0 24 hm5C_associated_SNPs_94165 3 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:161293392-161293432
64251 chr8 145736008 145736008 1 + G T BLCA 145736004 + 145735984 145736024 41 ACTGCTGCCTCTGTTGAGGTCGGTGCTGCGCTTCCGCCTCG ACTGCTGCCTCTGTTGAGGTCGGTTCTGCGCTTCCGCCTCG < 41bp 0.727086468692711 0.521984746353616 0.5706461 0.14495149 prediction 0.410203444678191 Functional Loss - MFSD3 ENSG00000167700 CDS Human protein_coding chr8:145736004 chr8:145736008 synonymous SNV . 0 25 hm5C_associated_SNPs_94172 0 0 1 BUD13 POSTAR2 ENCODE chr8:145735981-145736020
64251 chr16 69375204 69375204 1 + C T UCEC 69375202 + 69375182 69375222 41 TACCAGGGCGTGGTGGTGTACTCCATGGCAGACATCCCTTT TACCAGGGCGTGGTGGTGTACTTCATGGCAGACATCCCTTT < 41bp 0.886026049570696 0.680933055803313 0.9267403 0.10498333 prediction 0.410185987534766 Functional Loss - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69375202 chr16:69375204 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_94173 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:69375179-69375212
64251 chr1 160393995 160393995 1 + C T CESC 160393992 + 160393972 160394012 41 ATGCAGAAGTACCTTCGGACCACCAAGCAGCAGCCCTACCA ATGCAGAAGTACCTTCGGACCACTAAGCAGCAGCCCTACCA < 41bp 0.784586903555875 0.579494162723114 0.03432384 0.3860512 prediction 0.410185481665522 Functional Loss - VANGL2 ENSG00000162738 CDS Human protein_coding chr1:160393992 chr1:160393995 synonymous SNV . 0 24 hm5C_associated_SNPs_94174 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486178 chr1:160393994-160393995
64251 chr7 120629802 120629802 1 + G T LUAD 120629798 + 120629778 120629818 41 CTCCGAGGGTCGAGGAAGCTCACAGCCGCTGCCCCTGGGGC CTCCGAGGGTCGAGGAAGCTCACATCCGCTGCCCCTGGGGC < 41bp 0.720047723875734 0.514955742470242 0.38355967 0.21458364 prediction 0.410183962810984 Functional Loss - CPED1 ENSG00000106034 CDS Human protein_coding chr7:120629798 chr7:120629802 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_94175 0 0 1 RBM15 POSTAR2 ENCODE chr7:120629733-120629826
64251 chr5 177631783 177631783 1 + G A rs17080447 177631780 + 177631760 177631800 41 GCGGGAGCTCTGGCGGGAGCCGCGCCGGCCTGACGCGCTGT GCGGGAGCTCTGGCGGGAGCCGCACCGGCCTGACGCGCTGT < 41bp 0.783696437713505 0.578606584703941 0.85179794 0.8165778 prediction 0.410179706019129 Functional Loss - HNRNPAB ENSG00000197451 UTR5 Human protein_coding chr5:177631780 chr5:177631783 . . 0 24 hm5C_associated_SNPs_94177 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:177631772-177631801
64251 chr7 97833409 97833409 1 + C T rs202016789 97833407 + 97833387 97833427 41 ACGGAGCAGAGCTGGCCGCACTCGGCGCCTTACTCCCGGTT ACGGAGCAGAGCTGGCCGCACTTGGCGCCTTACTCCCGGTT < 41bp 0.705085079999709 0.425126678843902 0.18985695 0.10379994 prediction 0.410170159999417 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833407 chr7:97833409 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_94180 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:97833404-97833455
64251 chr7 97833410 97833410 1 + G A rs200807391 97833407 + 97833387 97833427 41 ACGGAGCAGAGCTGGCCGCACTCGGCGCCTTACTCCCGGTT ACGGAGCAGAGCTGGCCGCACTCAGCGCCTTACTCCCGGTT < 41bp 0.705085079999709 0.449959213643604 0.18985695 0.03141582 prediction 0.410170159999417 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833407 chr7:97833410 synonymous SNV . 0 24 hm5C_associated_SNPs_94181 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:97833404-97833455
64251 chr16 67116119 67116119 1 + G T LUSC 67116116 + 67116096 67116136 41 TATTTCATGTATTCTGACAGCAGGAGGATGCATTAGCACAA TATTTCATGTATTCTGACAGCAGTAGGATGCATTAGCACAA < 41bp 0.705081927046119 0.333861183665518 0.8233608 0.37234756 prediction 0.410163854092239 Functional Loss - CBFB ENSG00000067955 CDS Human protein_coding chr16:67116116 chr16:67116119 stopgain 1.000 1 24 hm5C_associated_SNPs_94184 0 0 4 GRWD1 POSTAR2 ENCODE chr16:67116113-67116220
64251 chr1 215753270 215753270 1 + G A UCEC 215753267 + 215753247 215753287 41 AACAGGATTTCCTGTGGATCCACGAAAGGTGCTAATAGTAG AACAGGATTTCCTGTGGATCCACAAAAGGTGCTAATAGTAG < 41bp 0.776790586215735 0.571709868407014 0.054600447 0.05225104 prediction 0.410161435617443 Functional Loss - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215753267 chr1:215753270 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_94186 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:215753258-215753293
64251 chr9 96863864 96863864 1 + G T SARC 96863861 + 96863841 96863881 41 TTTTTAGAAAGAGCTTAATTCCCGAGATGGAGCTTGGGAAA TTTTTAGAAAGAGCTTAATTCCCTAGATGGAGCTTGGGAAA < 41bp 0.705078047791267 0.319663331985812 0.18014967 0.11735162 prediction 0.410156095582533 Functional Loss - PTPDC1 ENSG00000158079 CDS Human protein_coding chr9:96863861 chr9:96863864 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_94191 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:96863826-96863882
64251 chr19 4793323 4793323 1 + G A LUAD 4793320 + 4793300 4793340 41 CCTGCAGCTGCCCAGGGAGCCCGGAGACTCAGCCCAGTTCA CCTGCAGCTGCCCAGGGAGCCCGAAGACTCAGCCCAGTTCA < 41bp 0.814332167370827 0.609262359858103 0.8997674 0.19271272 prediction 0.41013961502545 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793320 chr19:4793323 nonsynonymous SNV 0.651 0 24 hm5C_associated_SNPs_94203 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:4793320-4793340
64251 chr1 207818547 207818547 1 + C T rs200786262 207818545 + 207818525 207818565 41 CTTTCGGTTTCTCTGCTCACCTCCGGATAAATCACGGGGTC CTTTCGGTTTCTCTGCTCACCTTCGGATAAATCACGGGGTC < 41bp 0.705066841392401 0.476640550222389 0.8484604 0.54195386 prediction 0.410133682784801 Functional Loss - CR1L ENSG00000197721 UTR5 Human protein_coding chr1:207818545 chr1:207818547 . . 0 23 hm5C_associated_SNPs_94205 0 0 1 IGF2BP2 POSTAR2 ENCODE chr1:207818490-207818616
64251 chr3 58487025 58487025 1 + G A UCEC 58487022 + 58487002 58487042 41 AGTTGTGGAGCTGTCTAGTACTCGGAAGCTTTCTAAGTACT AGTTGTGGAGCTGTCTAGTACTCAGAAGCTTTCTAAGTACT < 41bp 0.705066269386011 0.464923475875425 0.09042886 0.04983619 prediction 0.410132538772023 Functional Loss - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58487022 chr3:58487025 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_94206 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:58486994-58487058
64251 chr11 44219485 44219485 1 + G T STAD 44219483 + 44219463 44219503 41 GACCGAGTAGAGAGCCTCTTCCGGGTCATCACTGAAGTGTC GACCGAGTAGAGAGCCTCTTCCTGGTCATCACTGAAGTGTC < 41bp 0.705065878009593 0.345837108085003 0.89815557 0.034551293 prediction 0.410131756019186 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44219483 chr11:44219485 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_94207 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:44219471-44219496
64251 chr14 74325597 74325597 1 + G A LIHC 74325594 + 74325574 74325614 41 TCAAAGAGTGGTATTGAATTCTCGACCTGGTATGTATTTGC TCAAAGAGTGGTATTGAATTCTCAACCTGGTATGTATTTGC < 41bp 0.770232621579173 0.565175877925707 0.19056007 0.05054429 prediction 0.410113487306933 Functional Loss - PTGR2 ENSG00000140043;ENSG00000258653 CDS Human other chr14:74325594 chr14:74325597 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_94211 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr14:74325566-74325597
64251 chr11 210610 210610 1 + C T LGG 210607 + 210587 210627 41 ACCGACACCTGGGGACCCTTCTCCGGCACTGTGTGATGATC ACCGACACCTGGGGACCCTTCTCTGGCACTGTGTGATGATC < 41bp 0.705056498704226 0.469085829909466 0.10574213 0.029616088 prediction 0.410112997408452 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:210607 chr11:210610 nonsynonymous SNV 0.897 2 24 hm5C_associated_SNPs_94212 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:210577-210617
64251 chr16 85111074 85111074 1 + G A COAD 85111071 + 85111051 85111091 41 CCGGAGTCCCGGGAGAAGCCCGCGGGCAGCATCGACTCCTA CCGGAGTCCCGGGAGAAGCCCGCAGGCAGCATCGACTCCTA < 41bp 0.83111798334123 0.626062756040722 0.88230747 0.25893673 prediction 0.410110454601015 Functional Loss - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85111071 chr16:85111074 synonymous SNV . 0 24 hm5C_associated_SNPs_94213 0 0 2 BUD13 POSTAR2 ENCODE chr16:85111010-85111117
64251 chr16 84778784 84778784 1 + G A UCEC 84778781 + 84778761 84778801 41 ACAGTCCTTTCCCCGGAGCACTCGGCAGTGACACCAGGACT ACAGTCCTTTCCCCGGAGCACTCAGCAGTGACACCAGGACT < 41bp 0.793298236385457 0.588244722236125 0.18593094 0.09931463 prediction 0.410107028298664 Functional Loss - USP10 ENSG00000103194 CDS Human protein_coding chr16:84778781 chr16:84778784 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_94215 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:84778760-84778860
64251 chr16 11219945 11219945 1 + G T LUAD 11219943 + 11219923 11219963 41 GCTTCTACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACA GCTTCTACGACCAGGGGCGCCGTGGCAGCAGCGACCCCACA < 41bp 0.70504772098668 0.335788222790627 0.88400006 0.4450628 prediction 0.41009544197336 Functional Loss - CLEC16A ENSG00000038532 CDS Human protein_coding chr16:11219943 chr16:11219945 synonymous SNV . 0 23 hm5C_associated_SNPs_94221 0 0 2 DDX24 POSTAR2 ENCODE chr16:11219917-11219989
64251 chr19 45593409 45593409 1 + C T rs575528129 45593406 + 45593386 45593426 41 TGAACATTCCCGTGCCTGTGCTCCGGCTGCCCCGGGGCCCT TGAACATTCCCGTGCCTGTGCTCTGGCTGCCCCGGGGCCCT < 41bp 0.758833862932638 0.553786257630658 0.23342869 0.148799 prediction 0.410095210603959 Functional Loss - GEMIN7 ENSG00000142252 CDS Human protein_coding chr19:45593406 chr19:45593409 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_94222 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:45593378-45593411
64251 chr5 126113229 126113229 1 + G T rs540123967 126113225 + 126113205 126113245 41 CGACTGCGACCCCCGTGCCGCCGCGGATGGGCAGCCGCGCT CGACTGCGACCCCCGTGCCGCCGCTGATGGGCAGCCGCGCT < 41bp 0.744412948566141 0.539367007758686 0.6542311 0.38012192 prediction 0.410091881614909 Functional Loss - LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126113225 chr5:126113229 nonsynonymous SNV 0.471 2 25 hm5C_associated_SNPs_94224 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr5:126113198-126113241
64251 chr15 44063386 44063386 1 + G T COAD 44063383 + 44063363 44063403 41 GTAATTCAAGAAGAAAAACCCAAGAAGAAGAAGAAGGCACA GTAATTCAAGAAGAAAAACCCAATAAGAAGAAGAAGGCACA < 41bp 0.705045709495936 0.335586390310267 0.72559226 0.8448998 prediction 0.410091418991873 Functional Loss - PDIA3 ENSG00000167004 CDS Human protein_coding chr15:44063383 chr15:44063386 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94225 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:44063360-44063400
64251 chr17 79954652 79954652 1 + G T LUAD 79954649 + 79954629 79954669 41 CAAGCCAAAGAAGTCCAAGTCGGGCCAGGATCCCCAGCAGG CAAGCCAAAGAAGTCCAAGTCGGTCCAGGATCCCCAGCAGG < 41bp 0.705045198188152 0.293929992568461 0.8852232 0.19297627 prediction 0.410090396376304 Functional Loss - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79954649 chr17:79954652 nonsynonymous SNV 0.252 2 24 hm5C_associated_SNPs_94227 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:79954644-79954662
64251 chr20 36031843 36031843 1 + G A rs77995057 36031840 + 36031820 36031860 41 CTGGGCTGGGTGGCCCCTGTCTCGGGGCTTGCCCCACTCTG CTGGGCTGGGTGGCCCCTGTCTCAGGGCTTGCCCCACTCTG < 41bp 0.826456830680061 0.621411662568703 0.457985 0.10306594 prediction 0.410090336222718 Functional Loss - SRC ENSG00000197122 UTR3 Human protein_coding chr20:36031840 chr20:36031843 . . 0 24 hm5C_associated_SNPs_94228 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:36031838-36031888
64251 chr2 101619256 101619256 1 + G A UCEC 101619253 + 101619233 101619273 41 GAATACACCATCAACATTCACAAGCGCATCCATGGAGTGTG GAATACACCATCAACATTCACAAACGCATCCATGGAGTGTG < 41bp 0.705042732375877 0.469463086614036 0.292052 0.25141764 prediction 0.410085464751754 Functional Loss - RPL31 ENSG00000071082 CDS Human protein_coding chr2:101619253 chr2:101619256 synonymous SNV . 0 24 hm5C_associated_SNPs_94230 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:101619196-101619262
64251 chr1 27268302 27268302 1 + G A OV 27268299 + 27268279 27268319 41 GAACGGCAGCCTTGACTCCCCAGGGAAGCAGGTGAGATGGA GAACGGCAGCCTTGACTCCCCAGAGAAGCAGGTGAGATGGA < 41bp 0.822614171977973 0.617572006380625 0.90151775 0.8335782 prediction 0.410084331194696 Functional Loss - NUDC ENSG00000090273 CDS Human protein_coding chr1:27268299 chr1:27268302 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_94231 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:27268286-27268303
64251 chr21 30724100 30724100 1 + G A GBM 30724097 + 30724077 30724117 41 ATCAAGGATGAAGTTTAACACAGGAATGAGAAGTAGAGCAC ATCAAGGATGAAGTTTAACACAGAAATGAGAAGTAGAGCAC < 41bp 0.725353268571746 0.520314223866086 0.7805399 0.40774924 prediction 0.410078089411319 Functional Loss - BACH1;BACH1-IT2 ENSG00000248476 ncRNA_exonic Human sense_intronic chr21:30724097 chr21:30724100 . . 0 24 hm5C_associated_SNPs_94235 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:30724068-30724122
64251 chr3 50225432 50225432 1 + G A SKCM 50225429 + 50225409 50225449 41 GCCTCATCCACCAGTACTGCCAGGGTTACTGGCGCCATGTG GCCTCATCCACCAGTACTGCCAGAGTTACTGGCGCCATGTG < 41bp 0.817109514584044 0.612073558433805 0.9261278 0.90871084 prediction 0.410071912300478 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50225429 chr3:50225432 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_94241 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:50225402-50225432
64251 chr2 172412334 172412334 1 + C T rs149411109 172412332 + 172412312 172412352 41 AGTAACTCACCCCAAGGTCACACGGCTCATACATGGTGGGA AGTAACTCACCCCAAGGTCACATGGCTCATACATGGTGGGA < 41bp 0.791113441444737 0.586086941921403 0.12073937 0.16347119 prediction 0.410052999046668 Functional Loss - CYBRD1 ENSG00000071967 UTR3 Human protein_coding chr2:172412332 chr2:172412334 . . 0 23 hm5C_associated_SNPs_94245 0 0 2 IGF2BP2 POSTAR2 ENCODE chr2:172412294-172412367
64251 chr4 174216643 174216643 1 + G A COAD 174216640 + 174216620 174216660 41 AAGGGAAGGTTTAATTCAAGCACGAAGTATTGGTGCTCAGA AAGGGAAGGTTTAATTCAAGCACAAAGTATTGGTGCTCAGA < 41bp 0.767530764067683 0.562504649977251 0.24719116 0.105826855 prediction 0.410052228180864 Functional Loss - GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174216640 chr4:174216643 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_94246 0 0 1 BUD13 POSTAR2 ENCODE chr4:174216591-174216723
64251 chr22 21799889 21799889 1 + C T rs139749703 21799886 + 21799866 21799906 41 GGGGGCTGCAGCAGCAGCACCAACGGGAGCAGCGGGGGCTG GGGGGCTGCAGCAGCAGCACCAATGGGAGCAGCGGGGGCTG < 41bp 0.718019520331563 0.512995138118027 0.6038062 0.5793071 prediction 0.410048764427071 Functional Loss - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799886 chr22:21799889 synonymous SNV . 0 24 hm5C_associated_SNPs_94248 0 0 10 CSTF2T POSTAR2 ENCODE chr22:21799854-21799898
64251 chr20 46275996 46275996 1 + G T UCEC 46275994 + 46275974 46276014 41 CTATGATGAATCAGATGAACCAGCAAGGCAATTTTCCTCTC CTATGATGAATCAGATGAACCATCAAGGCAATTTTCCTCTC < 41bp 0.70501692811373 0.380510939022195 0.16617617 0.13698664 prediction 0.410033856227461 Functional Loss - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46275994 chr20:46275996 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_94253 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:46275983-46276003
64251 chr1 46876526 46876526 1 + G A UCEC 46876523 + 46876503 46876543 41 TTTCCTCAGCAACATGAAGTCTCGGTAAGGGTTCTTCTGTG TTTCCTCAGCAACATGAAGTCTCAGTAAGGGTTCTTCTGTG < 41bp 0.808632418296862 0.603616884831642 0.16926211 0.042997897 prediction 0.410031066930439 Functional Loss - FAAH ENSG00000117480 CDS Human protein_coding chr1:46876523 chr1:46876526 nonsynonymous SNV 0.835 1 24 hm5C_associated_SNPs_94254 0 0 1 PRPF8 POSTAR2 ENCODE chr1:46876499-46876570
64251 chr19 58697121 58697121 1 + G T GBM 58697118 + 58697098 58697138 41 ATGTAACACTGGGTTTTACCCCGGAAGAGTGGGGACTGCTG ATGTAACACTGGGTTTTACCCCGTAAGAGTGGGGACTGCTG < 41bp 0.705014352413418 0.350996406762129 0.39869446 0.10463449 prediction 0.410028704826837 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58697118 chr19:58697121 stopgain 0.153 0 24 hm5C_associated_SNPs_94258 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58697065-58697134
64251 chr6 33172479 33172479 1 + G T rs138620921 33172477 + 33172457 33172497 41 GCTCCAGAACCGACTCCGCTCCGCACTGGCCTTGGTCACAG GCTCCAGAACCGACTCCGCTCCTCACTGGCCTTGGTCACAG < 41bp 0.705012579737653 0.351017962064126 0.10966417 0.036899507 prediction 0.410025159475306 Functional Loss - HSD17B8 ENSG00000204228 CDS Human protein_coding chr6:33172477 chr6:33172479 nonsynonymous SNV 0.983 2 23 hm5C_associated_SNPs_94260 0 0 1 DDX3X POSTAR2 ENCODE chr6:33172452-33172499
64251 chr22 38282794 38282794 1 + C T SKCM 38282792 + 38282772 38282812 41 GACATGATCCACATCGCGGACACCAAGGTCGCCAGGCGTTA GACATGATCCACATCGCGGACATCAAGGTCGCCAGGCGTTA < 41bp 0.705010380504053 0.398254269991935 0.0919894 0.19152778 prediction 0.410020761008105 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282792 chr22:38282794 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_94263 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38282769-38282809
64251 chr22 38282795 38282795 1 + C T SKCM 38282792 + 38282772 38282812 41 GACATGATCCACATCGCGGACACCAAGGTCGCCAGGCGTTA GACATGATCCACATCGCGGACACTAAGGTCGCCAGGCGTTA < 41bp 0.705010380504053 0.4733272280412 0.0919894 0.16438827 prediction 0.410020761008105 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38282792 chr22:38282795 synonymous SNV . 0 24 hm5C_associated_SNPs_94264 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:38282769-38282809
64251 chr7 150033983 150033983 1 + T C UCEC 150033982 + 150033962 150034002 41 AGCGGAGAAGCCGGGAGAGGCTGGCGGACTGCAGATCACAC AGCGGAGAAGCCGGGAGAGGCCGGCGGACTGCAGATCACAC < 41bp 0.766578431575949 0.561568390199511 0.7512057 0.87546027 prediction 0.410020082752876 Functional Loss - LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150033982 chr7:150033983 synonymous SNV . 0 22 hm5C_associated_SNPs_94266 0 0 1 EIF3D POSTAR2 ENCODE chr7:150033930-150033994
64251 chr11 70265913 70265913 1 + C T CESC 70265910 + 70265890 70265930 41 AAGGACAAAGTGGATAAGAGCGCCGTTGGCTTTGAGTATCA AAGGACAAAGTGGATAAGAGCGCTGTTGGCTTTGAGTATCA < 41bp 0.705005451790382 0.479829221459471 0.16293076 0.17511672 prediction 0.410010903580763 Functional Loss - CTTN ENSG00000085733 CDS Human protein_coding chr11:70265910 chr11:70265913 synonymous SNV . 0 24 hm5C_associated_SNPs_94269 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70265854-70265927
64251 chr7 134346720 134346720 1 + G A UCEC 134346717 + 134346697 134346737 41 TGTGCCCTTGGATCAACTGCCACGGTCGGAAAGCTTAAAGG TGTGCCCTTGGATCAACTGCCACAGTCGGAAAGCTTAAAGG < 41bp 0.813575812405922 0.608576229746484 0.21329531 0.15657037 prediction 0.409999165318878 Functional Loss - BPGM ENSG00000172331 CDS Human protein_coding chr7:134346717 chr7:134346720 nonsynonymous SNV 0.450 0 24 hm5C_associated_SNPs_94272 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:134346690-134346727
64251 chr17 45727350 45727350 1 + A C rs374694042 45727349 + 45727329 45727369 41 TTCTCCCTCCGCCTCCCGAGCACCAGCGCGCTCTGAGCTGC TTCTCCCTCCGCCTCCCGAGCCCCAGCGCGCTCTGAGCTGC < 41bp 0.775490726020612 0.570492514091486 0.18446806 0.14704919 prediction 0.409996423858251 Functional Loss - KPNB1 ENSG00000108424 UTR5 Human protein_coding chr17:45727349 chr17:45727350 . . 0 22 hm5C_associated_SNPs_94274 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:45727340-45727360
64251 chr7 134671415 134671415 1 + G A rs193093295 134671412 + 134671392 134671432 41 CGACTGGCCTGGCCAGAGGACTCGCGTGGGAGCGAGGTGCC CGACTGGCCTGGCCAGAGGACTCACGTGGGAGCGAGGTGCC < 41bp 0.728543178673318 0.523548923672027 0.4675948 0.38905483 prediction 0.409988510002581 Functional Loss - AGBL3 ENSG00000146856 UTR5 Human protein_coding chr7:134671412 chr7:134671415 . . 0 24 hm5C_associated_SNPs_94280 0 0 8 EFTUD2 POSTAR2 ENCODE chr7:134671397-134671520
64251 chr19 19216437 19216437 1 + C T CESC 19216435 + 19216415 19216455 41 CTCAGCTTGTGGCGCGGGAACTCGGCCACCATGGTGCGCGT CTCAGCTTGTGGCGCGGGAACTTGGCCACCATGGTGCGCGT < 41bp 0.868866002504989 0.663872219919639 0.8613287 0.60660505 prediction 0.4099875651707 Functional Loss - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19216435 chr19:19216437 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_94282 0 0 2 DDX3X POSTAR2 ENCODE chr19:19216366-19216441
64251 chr4 1348598 1348598 1 + G T THCA 1348596 + 1348576 1348616 41 CGCGACACACTCAAGCTCATCCGGAACAAGTTCCTGCCGGC CGCGACACACTCAAGCTCATCCTGAACAAGTTCCTGCCGGC < 41bp 0.704992253021663 0.336151175630418 0.40152198 0.16369903 prediction 0.409984506043326 Functional Loss - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1348596 chr4:1348598 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_94284 0 0 2 GRWD1 POSTAR2 ENCODE chr4:1348595-1348636
64251 chr15 40685688 40685688 1 + G T UCEC 40685685 + 40685665 40685705 41 TGCAGGCCTTAAAGGTAAAGCTGGAGATGAAAGAGGAAAGA TGCAGGCCTTAAAGGTAAAGCTGTAGATGAAAGAGGAAAGA < 41bp 0.928391172648137 0.723399379531421 0.1624282 0.15066794 prediction 0.409983586233432 Functional Loss - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40685685 chr15:40685688 stopgain 0.999 1 24 hm5C_associated_SNPs_94285 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:40685680-40685700
64251 chr19 9270912 9270912 1 + C T LGG 9270910 + 9270890 9270930 41 GCAAGAGGCCCTATCACCGCCGCGACTATGGGGTAGCGTTC GCAAGAGGCCCTATCACCGCCGTGACTATGGGGTAGCGTTC < 41bp 0.838696101370025 0.633705219086153 0.14915806 0.15311766 prediction 0.409981764567743 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9270910 chr19:9270912 synonymous SNV . 0 23 hm5C_associated_SNPs_94286 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:9270900-9270920
64251 chr17 27380507 27380507 1 + C T READ 27380505 + 27380485 27380525 41 ATAAACCCAGGGCTACTGGTCACGGTGAAAACCACCTCCAG ATAAACCCAGGGCTACTGGTCATGGTGAAAACCACCTCCAG < 41bp 0.851366832820166 0.646376325026548 0.6759352 0.2856734 prediction 0.409981015587235 Functional Loss - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27380505 chr17:27380507 nonsynonymous SNV 0.011 1 23 hm5C_associated_SNPs_94287 0 0 3 GRWD1 POSTAR2 ENCODE chr17:27380429-27380537
64251 chr17 43912053 43912053 1 + G A rs61732578 43912050 + 43912030 43912070 41 ACAAGCACTCGATCCGTGCCCGAGTGGCCCGTGCCATGTCC ACAAGCACTCGATCCGTGCCCGAATGGCCCGTGCCATGTCC < 41bp 0.709333835225208 0.504344067432611 0.32840365 0.21918383 prediction 0.409979535585194 Functional Loss - CRHR1;LINC02210-CRHR1 ENSG00000120088 CDS Human protein_coding chr17:43912050 chr17:43912053 nonsynonymous SNV 0.658 1 24 hm5C_associated_SNPs_94288 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:43912032-43912059
64251 chr18 33552766 33552766 1 + C T SKCM 33552764 + 33552744 33552784 41 GCCCGGGCCAAGCCCGCTACCTCCTGTAAGAGGACTGGAGG GCCCGGGCCAAGCCCGCTACCTTCTGTAAGAGGACTGGAGG < 41bp 0.79906876941115 0.594079399329977 0.19104394 0.18212438 prediction 0.409978740162346 Functional Loss - C18orf21 ENSG00000141428 CDS Human protein_coding chr18:33552764 chr18:33552766 synonymous SNV . 0 23 hm5C_associated_SNPs_94289 0 0 2 DDX3X POSTAR2 ENCODE chr18:33552698-33552767
64251 chr22 44386229 44386229 1 + A T UCEC 44386227 + 44386207 44386247 41 GGGATTGTCCTCAGGCTTGGCAACATCGCTCGGTTGGAACT GGGATTGTCCTCAGGCTTGGCATCATCGCTCGGTTGGAACT < 41bp 0.71501300340354 0.510027261186927 0.361651 0.176774 prediction 0.409971484433225 Functional Loss - SAMM50 ENSG00000100347 CDS Human protein_coding chr22:44386227 chr22:44386229 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_94292 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:44386201-44386243
64251 chr22 38864268 38864268 1 + G T LUSC 38864266 + 38864246 38864286 41 TGTTCCGAATCCTCGGCGACCTGAGCCACCTCCTGGCCATG TGTTCCGAATCCTCGGCGACCTTAGCCACCTCCTGGCCATG < 41bp 0.704984667627676 0.348294278096382 0.77267295 0.16911677 prediction 0.409969335255353 Functional Loss - KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38864266 chr22:38864268 synonymous SNV . 0 23 hm5C_associated_SNPs_94294 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr22:38864254-38864286
64251 chr2 149542465 149542465 1 + G A COAD 149542462 + 149542442 149542482 41 AGTCAATGTGCATATCAATACACGGACTTCAGCACCATCGC AGTCAATGTGCATATCAATACACAGACTTCAGCACCATCGC < 41bp 0.704978984250668 0.473027044433436 0.26469487 0.051477104 prediction 0.409957968501336 Functional Loss - EPC2 ENSG00000135999 CDS Human protein_coding chr2:149542462 chr2:149542465 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94299 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:149542449-149542485
64251 chr14 103999118 103999118 1 + C T UCEC 103999115 + 103999095 103999135 41 GGCGTGAGCCACGTGGCCGACGCCGTCTTCCTGGACATCCC GGCGTGAGCCACGTGGCCGACGCTGTCTTCCTGGACATCCC < 41bp 0.723569665924843 0.51859275708365 0.11228362 0.11216611 prediction 0.409953817682386 Functional Loss - TRMT61A ENSG00000166166 CDS Human protein_coding chr14:103999115 chr14:103999118 synonymous SNV . 0 24 hm5C_associated_SNPs_94300 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:103999116-103999144
64251 chr14 62551021 62551021 1 + G A LUAD 62551018 + 62550998 62551038 41 CCAGAGCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGG CCAGAGCTGTTGGTGGGGCTCTCATACAATGCCACAACGGG < 41bp 0.704973639728934 0.460005331878781 0.50976235 0.61957365 prediction 0.409947279457868 Functional Loss - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62551018 chr14:62551021 synonymous SNV . 0 24 hm5C_associated_SNPs_94304 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334287 chr14:62551020-62551040
64251 chr3 155633924 155633924 1 + T C rs574699490 155633923 + 155633903 155633943 41 CCTTGTTGCAAGTGGCAAAGCTGAACTCATCAAAACCCATC CCTTGTTGCAAGTGGCAAAGCCGAACTCATCAAAACCCATC < 41bp 0.704971023273965 0.447697410605323 0.107207835 0.0907383 prediction 0.409942046547929 Functional Loss - GMPS ENSG00000163655 CDS Human protein_coding chr3:155633923 chr3:155633924 synonymous SNV . 0 22 hm5C_associated_SNPs_94308 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155633873-155633958
64251 chr2 178977522 178977522 1 + G A BLCA 178977519 + 178977499 178977539 41 AGCTCACAGGCCTGCAGGGCCATGGAGGAGATGCATGGCCA AGCTCACAGGCCTGCAGGGCCATAGAGGAGATGCATGGCCA < 41bp 0.806114112605531 0.601144250765497 0.687726 0.57409644 prediction 0.409939723680067 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977519 chr2:178977522 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_94310 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:178977520-178977540
64251 chrX 64955264 64955264 1 + G T DLBC 64955260 + 64955240 64955280 41 CAGCAGATGAAGGCACAGGCCCGGGAGGAGAAGCACCAGAA CAGCAGATGAAGGCACAGGCCCGGTAGGAGAAGCACCAGAA < 41bp 0.705776653952381 0.500809196496044 0.8749678 0.35423735 prediction 0.409934914912674 Functional Loss - MSN ENSG00000147065 CDS Human protein_coding chrX:64955260 chrX:64955264 stopgain 1.000 1 25 hm5C_associated_SNPs_94313 0 0 4 FMR1 POSTAR2 ENCODE chrX:64955142-64955273
64251 chr16 1836639 1836639 1 + C T OV 1836636 + 1836616 1836656 41 CCACGGAGCTGGCCCTGGCACTGCGCCATGCAGGCAAGAAG CCACGGAGCTGGCCCTGGCACTGTGCCATGCAGGCAAGAAG < 41bp 0.718904325337917 0.513941174208221 0.25012404 0.20967841 prediction 0.409926302259393 Functional Loss - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1836636 chr16:1836639 nonsynonymous SNV 0.462 2 24 hm5C_associated_SNPs_94317 0 0 10 BUD13 POSTAR2 ENCODE chr16:1836588-1836770
64251 chr12 56548957 56548957 1 + G A SKCM 56548954 + 56548934 56548974 41 CCCACCAACGCCGAGGTGCTCAAGGTCCTGGGGAACCCCAA CCCACCAACGCCGAGGTGCTCAAAGTCCTGGGGAACCCCAA < 41bp 0.807922699970628 0.602965255846315 0.898834 0.75699186 prediction 0.409914888248626 Functional Loss - MYL6B ENSG00000196465 CDS Human protein_coding chr12:56548954 chr12:56548957 synonymous SNV . 0 24 hm5C_associated_SNPs_94323 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56548900-56548974
64251 chr19 48248827 48248827 1 + G A COAD 48248824 + 48248804 48248844 41 TTCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTGGTG TTCCTTTGACAAGATGGCGGCAGAAGGCAGTGGCGTTGGTG < 41bp 0.704951484188557 0.461628471197028 0.60392207 0.39699814 prediction 0.409902968377114 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248824 chr19:48248827 nonsynonymous SNV 0.013 1 24 hm5C_associated_SNPs_94327 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr18 67992075 67992075 1 + C T COAD 67992072 + 67992052 67992092 41 GATATGGCCAGCTGCGATATCAACGGTGAAGATGAAAAAGG GATATGGCCAGCTGCGATATCAATGGTGAAGATGAAAAAGG < 41bp 0.704949132692966 0.490435032953693 0.7949457 0.39261186 prediction 0.409898265385932 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992072 chr18:67992075 synonymous SNV . 0 24 hm5C_associated_SNPs_94331 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr18:67992066-67992096
64251 chr11 45948387 45948387 1 + C T SARC 45948385 + 45948365 45948405 41 AACCGCCACCCCCCCGGCCTCACGATGTCACCCTTGTGGCC AACCGCCACCCCCCCGGCCTCATGATGTCACCCTTGTGGCC < 41bp 0.861283930645495 0.656335387563049 0.2265912 0.18720001 prediction 0.409897086164891 Functional Loss - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45948385 chr11:45948387 synonymous SNV . 0 23 hm5C_associated_SNPs_94332 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:45948348-45948387
64251 chr8 11182849 11182849 1 + G A rs114763415 11182846 + 11182826 11182866 41 TGGATGAGAAGAATAAATGACACGGATACACTCCTGAGAAG TGGATGAGAAGAATAAATGACACAGATACACTCCTGAGAAG < 41bp 0.775274613582191 0.570331987008974 0.21213242 0.08394632 prediction 0.409885253146433 Functional Loss - MTMR9 ENSG00000246477 ncRNA_exonic Human antisense chr8:11182846 chr8:11182849 . . 0 24 hm5C_associated_SNPs_94340 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:11182834-11182864
64251 chr7 73790301 73790301 1 + C T UCEC 73790298 + 73790278 73790318 41 GAGGTGAAATCGAGGAGCTCCAGCAGTGCCTGTTGCACTCG GAGGTGAAATCGAGGAGCTCCAGTAGTGCCTGTTGCACTCG < 41bp 0.741426029980138 0.536484091511594 0.8839977 0.8628166 prediction 0.409883876937088 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790298 chr7:73790301 stopgain 0.002 0 24 hm5C_associated_SNPs_94342 0 0 5 EIF3H POSTAR2 ENCODE chr7:73790251-73790336
64251 chr5 140475021 140475021 1 + C T UCEC 140475018 + 140474998 140475038 41 TGAGATCAGGTTAACCCTCACAGCGCTAGATGGCGGGAGTC TGAGATCAGGTTAACCCTCACAGTGCTAGATGGCGGGAGTC < 41bp 0.711416561101339 0.506475173238785 0.79507303 0.6416946 prediction 0.409882775725109 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475018 chr5:140475021 nonsynonymous SNV 0.978 3 24 hm5C_associated_SNPs_94343 0 0 1 SND1 POSTAR2 ENCODE chr5:140475016-140475062
64251 chr17 79687921 79687921 1 + G A rs73354171 79687918 + 79687898 79687938 41 TTCCTCCTTAGGGCCTTCTCCCCGACAAGGAGTCCGACGGG TTCCTCCTTAGGGCCTTCTCCCCAACAAGGAGTCCGACGGG < 41bp 0.724065241307753 0.519124809763877 0.2953573 0.15617329 prediction 0.409880863087751 Functional Loss - SLC25A10 ENSG00000183048 UTR3 Human protein_coding chr17:79687918 chr17:79687921 . . 0 24 hm5C_associated_SNPs_94344 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:79687920-79687940
64251 chr12 58002362 58002362 1 + G A PRAD 58002359 + 58002339 58002379 41 ACCACACGGGTGGCCTACCTCCCGGACTGCCCTGAGGGCAA ACCACACGGGTGGCCTACCTCCCAGACTGCCCTGAGGGCAA < 41bp 0.807763908458281 0.602826672181215 0.25220537 0.17693582 prediction 0.409874472554132 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002359 chr12:58002362 synonymous SNV . 0 24 hm5C_associated_SNPs_94346 0 0 1 PPIG POSTAR2 ENCODE chr12:58002340-58002401
64251 chr19 16238876 16238876 1 + C T UCEC 16238874 + 16238854 16238894 41 ATCAAGTTCATGGAGACCAGCGCGAAGGCCAACATCAATGT ATCAAGTTCATGGAGACCAGCGTGAAGGCCAACATCAATGT < 41bp 0.870035540756474 0.665101069132253 0.1836327 0.19704542 prediction 0.409868943248442 Functional Loss - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16238874 chr19:16238876 nonsynonymous SNV 0.993 5 23 hm5C_associated_SNPs_94347 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:16238847-16238885
64251 chr5 128430575 128430575 1 + C T LUSC 128430573 + 128430553 128430593 41 TTCTCAGTCTTCGCGCGACCCTCGTCGGTGCCACACGGGGC TTCTCAGTCTTCGCGCGACCCTTGTCGGTGCCACACGGGGC < 41bp 0.826855511723021 0.621922572249309 0.16328964 0.1420193 prediction 0.409865878947423 Functional Loss - ISOC1 ENSG00000066583 CDS Human protein_coding chr5:128430573 chr5:128430575 nonsynonymous SNV 0.983 1 23 hm5C_associated_SNPs_94349 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:128430553-128430578
64251 chr10 102672870 102672870 1 + G T CESC 102672867 + 102672847 102672887 41 GCCGTCGCCAGCGGCGCCGACATGACAAGGCGCTGCATGCC GCCGTCGCCAGCGGCGCCGACATTACAAGGCGCTGCATGCC < 41bp 0.704929474874573 0.454864731472268 0.004569739 0.0022715926 prediction 0.409858949749147 Functional Loss - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102672867 chr10:102672870 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94350 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:102672860-102672880
64251 chr19 36633617 36633617 1 + A T LUSC 36633613 + 36633593 36633633 41 AGTGAGGAGGTCCGGCAGTTCCGGAGACTCTTTGCCCAGCT AGTGAGGAGGTCCGGCAGTTCCGGTGACTCTTTGCCCAGCT < 41bp 0.901457486075266 0.696529046389143 0.9352629 0.8342687 prediction 0.409856879372244 Functional Loss - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36633613 chr19:36633617 stopgain 0.998 1 25 hm5C_associated_SNPs_94352 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:36633610-36633634
64251 chr10 75533491 75533491 1 + C T SKCM 75533488 + 75533468 75533508 41 GGGACAGCCCCGTCTTTGAGCCCCACATTGCCCAGCCCTCA GGGACAGCCCCGTCTTTGAGCCCTACATTGCCCAGCCCTCA < 41bp 0.73941048151987 0.53448387126499 0.24093515 0.61157644 prediction 0.409853220509759 Functional Loss - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75533488 chr10:75533491 nonsynonymous SNV 0.161 0 24 hm5C_associated_SNPs_94353 0 0 1 RBM15 POSTAR2 ENCODE chr10:75533342-75533496
64251 chr15 76633484 76633484 1 + G A SKCM 76633481 + 76633461 76633501 41 TGCTTGCCCCGCAGAGCCTTCAGGGACTGACTGGGACGCCC TGCTTGCCCCGCAGAGCCTTCAGAGACTGACTGGGACGCCC < 41bp 0.817887435115858 0.612965048176213 0.8984495 0.82618046 prediction 0.409844773879289 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76633481 chr15:76633484 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_94357 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:76633474-76633500
64251 chr1 29069550 29069550 1 + G A GBM 29069547 + 29069527 29069567 41 CAGCAACCTAAACTGAAGACCAAGAATGGCATTGCAGGGTC CAGCAACCTAAACTGAAGACCAAAAATGGCATTGCAGGGTC < 41bp 0.789938111409828 0.585016171941894 0.33403087 0.27262577 prediction 0.409843878935869 Functional Loss - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069547 chr1:29069550 synonymous SNV . 0 24 hm5C_associated_SNPs_94359 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:29069526-29069568
64251 chr17 14204937 14204937 1 + G A STAD 14204934 + 14204914 14204954 41 CCGCCGGTGAGGAGGAAGCTCGCGCTGCTCTTCGCCATGCT CCGCCGGTGAGGAGGAAGCTCGCACTGCTCTTCGCCATGCT < 41bp 0.826437929213258 0.621516386546085 0.6808889 0.27921316 prediction 0.409843085334347 Functional Loss - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14204934 chr17:14204937 synonymous SNV . 0 24 hm5C_associated_SNPs_94360 0 0 2 CELF2 POSTAR2 GSE71264,GSM1831627 chr17:14204920-14204940
64251 chr20 61599474 61599474 1 + C T rs1047126 61599472 + 61599452 61599492 41 CCAGGTAGCCACCCTCGAGACACGACCTCAGAGTCTCTGTG CCAGGTAGCCACCCTCGAGACATGACCTCAGAGTCTCTGTG < 41bp 0.720128010074324 0.515209020057005 0.02050221 0.048939973 prediction 0.409837980034638 Functional Loss - SLC17A9 ENSG00000101194 UTR3 Human protein_coding chr20:61599472 chr20:61599474 . . 0 23 hm5C_associated_SNPs_94363 0 0 4 HNRNPK POSTAR2 ENCODE chr20:61599425-61599484
64251 chr1 2336562 2336562 1 + G A rs150136015 2336559 + 2336539 2336579 41 CAGATTTCTGTTTTCTAAAACTGGAAGCGACCTTGACGTGT CAGATTTCTGTTTTCTAAAACTGAAAGCGACCTTGACGTGT < 41bp 0.745361386647579 0.540445711170339 0.32542628 0.18011239 prediction 0.409831350954481 Functional Loss - PEX10;RER1 ENSG00000157911;ENSG00000157916 UTR3 Human other chr1:2336559 chr1:2336562 . . 0 24 hm5C_associated_SNPs_94365 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:2336530-2336573
64251 chr19 2806923 2806923 1 + C T rs116482195 2806920 + 2806900 2806940 41 TGGTGTCGGTTGCAGGAGAACTGCGCTATCCTCAAGGAGCT TGGTGTCGGTTGCAGGAGAACTGTGCTATCCTCAAGGAGCT < 41bp 0.737431801094502 0.532518259871798 0.76163524 0.51278275 prediction 0.409827082445408 Functional Loss - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2806920 chr19:2806923 synonymous SNV . 0 24 hm5C_associated_SNPs_94368 0 0 5 BUD13 POSTAR2 ENCODE chr19:2806915-2806955
64251 chr19 42730177 42730177 1 + C T LUSC 42730175 + 42730155 42730195 41 GGCAAGCGCTTCACACAGAGCTCCAACCTGCAGCAGCACCG GGCAAGCGCTTCACACAGAGCTTCAACCTGCAGCAGCACCG < 41bp 0.704911395199468 0.427074358194502 0.20744109 0.069986016 prediction 0.409822790398937 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42730175 chr19:42730177 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_94372 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:42730102-42730194
64251 chr13 114193729 114193729 1 + G A COAD 114193726 + 114193706 114193746 41 GCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCC GCTGTTTCCTGGCTGGAGCGCTCATCTCCTCTCAGGGCCCC < 41bp 0.818551712237908 0.613643007397849 0.020571858 0.018471211 prediction 0.409817409680119 Functional Loss - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114193726 chr13:114193729 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_94374 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr13:114193706-114193732
64251 chr11 68682369 68682369 1 + C T rs139497493 68682366 + 68682346 68682386 41 CTCTGTGTAAGCAGCGGATTCTGCGCCTGGGACACCCTGCC CTCTGTGTAAGCAGCGGATTCTGTGCCTGGGACACCCTGCC < 41bp 0.704906619949903 0.478410844894556 0.8102094 0.8473109 prediction 0.409813239899805 Functional Loss - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68682366 chr11:68682369 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_94375 0 0 3 BUD13 POSTAR2 ENCODE chr11:68682298-68682386
64251 chr5 33461117 33461117 1 + G A PRAD 33461114 + 33461094 33461134 41 TGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAAC TGGAGCACTCACAGGACTCACCCAGGTACGAAGATTCCAAC < 41bp 0.704906006856828 0.463837983029409 0.28729522 0.17211786 prediction 0.409812013713656 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33461114 chr5:33461117 nonsynonymous SNV 0.989 5 24 hm5C_associated_SNPs_94376 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33461011-33461151
64251 chr5 33461116 33461116 1 + C T UCEC 33461114 + 33461094 33461134 41 TGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAAC TGGAGCACTCACAGGACTCACCTGGGTACGAAGATTCCAAC < 41bp 0.704906006856828 0.420800947827769 0.28729522 0.3675236 prediction 0.409812013713656 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33461114 chr5:33461116 nonsynonymous SNV 0.986 5 23 hm5C_associated_SNPs_94377 0 0 36 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:33461011-33461151
64251 chr15 40475946 40475946 1 + C T SKCM 40475944 + 40475924 40475964 41 AGCTCGAGTGTCTCGGCAAACTCTGTTGGCACTTGAGAAAG AGCTCGAGTGTCTCGGCAAACTTTGTTGGCACTTGAGAAAG < 41bp 0.704905306816653 0.411662254603176 0.039930016 0.058854133 prediction 0.409810613633307 Functional Loss - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40475944 chr15:40475946 synonymous SNV . 0 23 hm5C_associated_SNPs_94378 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:40475926-40475964
64251 chr5 176084491 176084491 1 + A T rs373775782 176084487 + 176084467 176084507 41 CCCAGACTCTGAAATGGGTCCAAGAATTTTCTTTCTCTTGC CCCAGACTCTGAAATGGGTCCAAGTATTTTCTTTCTCTTGC < 41bp 0.70490047944067 0.386482997365154 0.17228311 0.1745449 prediction 0.40980095888134 Functional Loss - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176084487 chr5:176084491 . . 0 25 hm5C_associated_SNPs_94382 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176084490-176084510
64251 chr3 14706569 14706569 1 + C T rs78185490 14706566 + 14706546 14706586 41 TGGACTCTTTGGGGCGTTCCCGGCGCTGTATGAGAAAGGAT TGGACTCTTTGGGGCGTTCCCGGTGCTGTATGAGAAAGGAT < 41bp 0.773739939455133 0.568847043764522 0.9299518 0.89463913 prediction 0.409785791381222 Functional Loss - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14706566 chr3:14706569 nonsynonymous SNV 0.961 4 24 hm5C_associated_SNPs_94387 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr3:14706539-14706583
64251 chr5 149907674 149907674 1 + C T rs376821454 149907671 + 149907651 149907691 41 GTCCAGGACCTGGGCCTGCACGACGGCATCCAGCGCGTGCT GTCCAGGACCTGGGCCTGCACGATGGCATCCAGCGCGTGCT < 41bp 0.741543988433938 0.536660191214197 0.33499622 0.27056295 prediction 0.409767594439482 Functional Loss - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149907671 chr5:149907674 synonymous SNV . 0 24 hm5C_associated_SNPs_94394 0 0 1 RBM15 POSTAR2 ENCODE chr5:149907632-149907692
64251 chr17 30807637 30807637 1 + G T UCEC 30807634 + 30807614 30807654 41 GATTCCCTCTACAACAAAGCCAAGAAACTGACATAGGTGAG GATTCCCTCTACAACAAAGCCAATAAACTGACATAGGTGAG < 41bp 0.704873598279613 0.335980153859335 0.07019055 0.16049632 prediction 0.409747196559227 Functional Loss - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30807634 chr17:30807637 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_94400 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30807536-30807641
64251 chr10 105156450 105156450 1 + G A rs149421028 105156447 + 105156427 105156467 41 CGCGTGTGTGAGTACCGCGGCGCGAGGTTAGTGGTAGCTGG CGCGTGTGTGAGTACCGCGGCGCAAGGTTAGTGGTAGCTGG < 41bp 0.704871587140727 0.478628412801857 0.43928206 0.38424918 prediction 0.409743174281455 Functional Loss - PDCD11 ENSG00000148843 UTR5 Human protein_coding chr10:105156447 chr10:105156450 . . 0 24 hm5C_associated_SNPs_94404 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:105156432-105156473
64251 chr17 79419842 79419842 1 + G A COAD 79419839 + 79419819 79419859 41 TCGCTGCCTGCCCCACGTCCCACGGGGCCGCTCCCCAGGAG TCGCTGCCTGCCCCACGTCCCACAGGGCCGCTCCCCAGGAG < 41bp 0.704869015457316 0.450626920390297 0.86072195 0.24891901 prediction 0.409738030914631 Functional Loss - BAHCC1 ENSG00000171282 CDS Human other chr17:79419839 chr17:79419842 synonymous SNV . 0 24 hm5C_associated_SNPs_94405 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:79419832-79419866
64251 chr2 187370558 187370558 1 + G T PAAD 187370555 + 187370535 187370575 41 TACCCGCTACACCCAGGGAACAGGTGGTGATGAGGTAAGAG TACCCGCTACACCCAGGGAACAGTTGGTGATGAGGTAAGAG < 41bp 0.704863564603726 0.308951443440295 0.7127309 0.34665 prediction 0.409727129207453 Functional Loss - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370555 chr2:187370558 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_94412 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:187370453-187370568
64251 chr12 51450273 51450273 1 + G T PRAD 51450271 + 51450251 51450291 41 GGATTGGCCAGCTGACTGCTCAGGAAGTAAAATCGGTAAGA GGATTGGCCAGCTGACTGCTCATGAAGTAAAATCGGTAAGA < 41bp 0.90982224112054 0.704960681768829 0.74303454 0.27950603 prediction 0.409723118703423 Functional Loss - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51450271 chr12:51450273 stopgain 0.958 2 23 hm5C_associated_SNPs_94413 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:51450224-51450274
64251 chr12 110019269 110019269 1 + C T STAD 110019266 + 110019246 110019286 41 GGGGCGGGCTTGGGCTCCAGCGCCGCCTACTCGGTGTGTCT GGGGCGGGCTTGGGCTCCAGCGCTGCCTACTCGGTGTGTCT < 41bp 0.738420375068809 0.533568646793998 0.60331964 0.47959477 prediction 0.409703456549622 Functional Loss - MVK ENSG00000110921 CDS Human protein_coding chr12:110019266 chr12:110019269 synonymous SNV . 0 24 hm5C_associated_SNPs_94421 1 0 1 METAP2 POSTAR2 ENCODE chr12:110019199-110019280
64251 chr2 97017702 97017702 1 + C T BLCA 97017700 + 97017680 97017720 41 TCTGATGTCCAGACTCTCTCCACGGGAGAACCTCTCGAGTT TCTGATGTCCAGACTCTCTCCATGGGAGAACCTCTCGAGTT < 41bp 0.860123173381345 0.655277197057224 0.914731 0.6923792 prediction 0.409691952648241 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97017700 chr2:97017702 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_94425 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:97017671-97017707
64251 chr11 65735168 65735168 1 + C T rs143607098 65735165 + 65735145 65735185 41 CCCAGAGGAAGGTGGAGCTCCACCGCCGGGGTCCCCGCAGG CCCAGAGGAAGGTGGAGCTCCACTGCCGGGGTCCCCGCAGG < 41bp 0.704844351293593 0.491967343618052 0.44258177 0.17537332 prediction 0.409688702587186 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65735165 chr11:65735168 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_94426 0 0 24 BUD13 POSTAR2 ENCODE chr11:65735137-65735221
64251 chr20 34526943 34526943 1 + C T UCEC 34526940 + 34526920 34526960 41 GTCAACCCCCTCCATGAGAACGGCGATGATTCCCTTTCCCC GTCAACCCCCTCCATGAGAACGGTGATGATTCCCTTTCCCC < 41bp 0.704841254364644 0.496503747943902 0.23413607 0.12382117 prediction 0.409682508729289 Functional Loss - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526940 chr20:34526943 synonymous SNV . 0 24 hm5C_associated_SNPs_94429 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr20:34526940-34526960
64251 chr13 115090019 115090019 1 + G A rs3813131 115090016 + 115089996 115090036 41 CCCCAGAAGCAGTCTCATTTCCCGGAAACATTGGGGCCACC CCCCAGAAGCAGTCTCATTTCCCAGAAACATTGGGGCCACC < 41bp 0.704839462819488 0.466746558939652 0.4025416 0.21897352 prediction 0.409678925638975 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090016 chr13:115090019 synonymous SNV . 0 24 hm5C_associated_SNPs_94430 0 1 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:115090000-115090020
64251 chr18 72998116 72998116 1 + A T OV 72998112 + 72998092 72998132 41 AGCAAGTTCCGGTGCAAAGACTGCAGTGCCGCGTACGACAC AGCAAGTTCCGGTGCAAAGACTGCTGTGCCGCGTACGACAC < 41bp 0.917026837607129 0.712188388026448 0.7485278 0.34266517 prediction 0.409676899161361 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998112 chr18:72998116 nonsynonymous SNV 0.849 4 25 hm5C_associated_SNPs_94431 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr18:72998093-72998117
64251 chr22 23505833 23505833 1 + C T rs565207043 23505831 + 23505811 23505851 41 TAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATG TAGCTGCGCCCCTGAAGTGTCTTCAGCAGAAGAGATGGATG < 41bp 0.775504861709661 0.570667070285355 0.9374478 0.2686966 prediction 0.409675582848613 Functional Loss - RAB36 ENSG00000100228 UTR3 Human protein_coding chr22:23505831 chr22:23505833 . . 0 23 hm5C_associated_SNPs_94432 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23505811-23505839
64251 chr8 25316822 25316822 1 + G A rs141240299 25316819 + 25316799 25316839 41 TCCAGGTCAGCCGTCGGGACCTCGGGCTCCGGGTTCGAAGA TCCAGGTCAGCCGTCGGGACCTCAGGCTCCGGGTTCGAAGA < 41bp 0.723213908438655 0.518386396604576 0.25110656 0.27342463 prediction 0.409655023668158 Functional Loss - CDCA2 ENSG00000184661 UTR5 Human protein_coding chr8:25316819 chr8:25316822 . . 0 24 hm5C_associated_SNPs_94439 0 0 11 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:25316787-25316823
64251 chr19 47856759 47856759 1 + G T LUAD 47856756 + 47856736 47856776 41 GGCGTCTGGCCAAGCTGCAGCGTGAGCGGGCAGCCCTCCCC GGCGTCTGGCCAAGCTGCAGCGTTAGCGGGCAGCCCTCCCC < 41bp 0.704827257402452 0.295137665840018 0.86798954 0.8256198 prediction 0.409654514804905 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856756 chr19:47856759 stopgain 0.841 0 24 hm5C_associated_SNPs_94440 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:47856740-47856760
64251 chr6 4125529 4125529 1 - G A UCEC 4125532 - 4125512 4125552 41 AATGGTCCAGCTGTGGGCATCTCCGTCACCCTCCTTGGGCT AATGGTCCAGCTGTGGGCATCTCTGTCACCCTCCTTGGGCT < 41bp 0.777686188231801 0.572861764000637 0.3815302 0.107498676 prediction 0.40964884846233 Functional Loss - ECI2 ENSG00000198721 CDS Human protein_coding chr6:4125532 chr6:4125529 synonymous SNV . 0 24 hm5C_associated_SNPs_94442 0 0 5 EWSR1 POSTAR2 SRX029344 chr6:4125506-4125535
64251 chr5 179263616 179263616 1 + C T UCEC 179263613 + 179263593 179263633 41 ACCACTTTTGCCCACCTCTTCTGCGTGCCCCTCTTCTGTCT ACCACTTTTGCCCACCTCTTCTGTGTGCCCCTCTTCTGTCT < 41bp 0.727176947199554 0.522355526346654 0.05383742 0.042676687 prediction 0.409642841705799 Functional Loss - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179263613 chr5:179263616 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_94445 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr5:179263572-179263634
64251 chr19 42730345 42730345 1 + G A CESC 42730342 + 42730322 42730362 41 ACTGCATCAGCGGGTCCATGCCCGAGCTCGGACTTTGACGC ACTGCATCAGCGGGTCCATGCCCAAGCTCGGACTTTGACGC < 41bp 0.831074527328742 0.626258205791753 0.17317924 0.08178726 prediction 0.409632643073978 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42730342 chr19:42730345 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_94448 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42730340-42730360
64251 chr4 951869 951869 1 + G A SKCM 951866 + 951846 951886 41 CCAGCAGACCTCGGCCTTCGCCCGGCAGCCCCGCGATGAGC CCAGCAGACCTCGGCCTTCGCCCAGCAGCCCCGCGATGAGC < 41bp 0.704813113994611 0.451117980863092 0.83112293 0.18344933 prediction 0.409626227989222 Functional Loss - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951866 chr4:951869 nonsynonymous SNV 0.179 0 24 hm5C_associated_SNPs_94452 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:951841-951869
64251 chr10 14920943 14920943 1 + G A rs184647815 14920940 + 14920920 14920960 41 TGAGGCTGGAGCGCGGCCCCCTCGCCTTCCCTGTTCCCAGG TGAGGCTGGAGCGCGGCCCCCTCACCTTCCCTGTTCCCAGG < 41bp 0.785108220973114 0.580295490619735 0.120447606 0.033675194 prediction 0.409625460706758 Functional Loss - SUV39H2 ENSG00000152455 UTR5 Human protein_coding chr10:14920940 chr10:14920943 . . 0 24 hm5C_associated_SNPs_94453 0 0 2 PRPF8 POSTAR2 ENCODE chr10:14920892-14920959
64251 chr1 109777947 109777947 1 + A T LUAD 109777943 + 109777923 109777963 41 ACCGGGATGAGTGGCTCCGGCCGGAGGACCTGCCCATCAAG ACCGGGATGAGTGGCTCCGGCCGGTGGACCTGCCCATCAAG < 41bp 0.87944697945559 0.674634573141881 0.9088606 0.8452107 prediction 0.409624812627417 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109777943 chr1:109777947 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_94454 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr17 73805944 73805944 1 + C T UCEC 73805941 + 73805921 73805961 41 TCCACTGGCACTTCGTGAACCAGCGGCGCCGCCGGTCCATC TCCACTGGCACTTCGTGAACCAGTGGCGCCGCCGGTCCATC < 41bp 0.726141754688331 0.521333879459181 0.9226936 0.8149895 prediction 0.409615750458301 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73805941 chr17:73805944 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_94457 0 0 1 GRWD1 POSTAR2 ENCODE chr17:73805940-73806049
64251 chrX 54837516 54837516 1 + A C UCEC 54837512 + 54837492 54837532 41 CTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCA CTGCCAAGCTCCAGTCATCCCAAGCGCCTGAAGCACCACCA < 41bp 0.943910871163476 0.739103660580089 0.34715846 0.21413517 prediction 0.409614421166774 Functional Loss - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837512 chrX:54837516 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_94459 0 0 1 RPS3 POSTAR2 ENCODE chrX:54837505-54837563
64251 chr7 98956026 98956026 1 + C T LUAD 98956023 + 98956003 98956043 41 GTGTCATTTGTCTCAGAGAACAGCGTCGTGGCTGCTGTGAG GTGTCATTTGTCTCAGAGAACAGTGTCGTGGCTGCTGTGAG < 41bp 0.725902066955768 0.521097165590885 0.22971526 0.1750372 prediction 0.409609802729766 Functional Loss - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98956023 chr7:98956026 synonymous SNV . 0 24 hm5C_associated_SNPs_94460 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr7:98955975-98956036
64251 chr17 65688832 65688832 1 + C T SARC 65688829 + 65688809 65688849 41 CCGCAGTGCGCCTTCTAGTGCTCCATCCACCCCTCTCTCCA CCGCAGTGCGCCTTCTAGTGCTCTATCCACCCCTCTCTCCA < 41bp 0.73544495882523 0.530656778225385 0.25826395 0.23103374 prediction 0.40957636119969 Functional Loss - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688829 chr17:65688832 nonsynonymous SNV 0.438 3 24 hm5C_associated_SNPs_94473 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:65688832-65688833
64251 chr4 6826316 6826316 1 + G A UCEC 6826313 + 6826293 6826333 41 CAGTGCAGACCTGGCTGGGACAAGAGCTCGAGAAATGTGGC CAGTGCAGACCTGGCTGGGACAAAAGCTCGAGAAATGTGGC < 41bp 0.704788046823691 0.466958907435707 0.23976862 0.1667018 prediction 0.409576093647381 Functional Loss - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6826313 chr4:6826316 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94474 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:6826287-6826325
64251 chr17 78196512 78196512 1 + G A UCEC 78196509 + 78196489 78196529 41 GTATTTCTTCCTGGGCACCTCCCGGGATGTGACTCTGGGCC GTATTTCTTCCTGGGCACCTCCCAGGATGTGACTCTGGGCC < 41bp 0.704780662983912 0.445145024861603 0.27270395 0.25251895 prediction 0.409561325967824 Functional Loss - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78196509 chr17:78196512 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_94476 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:78196489-78196527
64251 chr1 109241957 109241957 1 + G A COAD 109241954 + 109241934 109241974 41 GGAGAAAGAACGGCGAAGATCCCGAAGTATTGACCGGGGGT GGAGAAAGAACGGCGAAGATCCCAAAGTATTGACCGGGGGT < 41bp 0.817281560020538 0.612502137117025 0.31112033 0.17669284 prediction 0.409558845807027 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241954 chr1:109241957 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_94478 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr1:109241927-109241961
64251 chr17 3628073 3628073 1 + G T LUSC 3628070 + 3628050 3628090 41 AACTGGTGGTGGGAAATGGACCAGAGGGTCCAGGTCTGTCA AACTGGTGGTGGGAAATGGACCATAGGGTCCAGGTCTGTCA < 41bp 0.704771915305212 0.311059216840227 0.28676453 0.06677362 prediction 0.409543830610424 Functional Loss - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3628070 chr17:3628073 stopgain 0.000 0 24 hm5C_associated_SNPs_94480 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:3628041-3628082
64251 chr5 70805966 70805966 1 + G A SKCM 70805963 + 70805943 70805983 41 GGAGACAGATTTGAACGCAACTGGAAGAGAGAGTTCTCCAA GGAGACAGATTTGAACGCAACTGAAAGAGAGAGTTCTCCAA < 41bp 0.704770034462197 0.472515450256752 0.84605086 0.8919935 prediction 0.409540068924393 Functional Loss - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70805963 chr5:70805966 nonsynonymous SNV 0.096 0 24 hm5C_associated_SNPs_94483 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:70805960-70805980
64251 chr17 12847441 12847441 1 + C T SKCM 12847438 + 12847418 12847458 41 CCGCTGGAGGAGCACCTCACCATCAGCGGCCGGGAGATCGC CCGCTGGAGGAGCACCTCACCATTAGCGGCCGGGAGATCGC < 41bp 0.704766826979015 0.477043540861659 0.3773837 0.23390064 prediction 0.409533653958031 Functional Loss - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12847438 chr17:12847441 synonymous SNV . 0 24 hm5C_associated_SNPs_94485 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:12847429-12847466
64251 chr19 44500313 44500313 1 + C T UCEC 44500310 + 44500290 44500330 41 CACATGAAGAGTGGTCCTGCCAGCAAATCTGGGAACAAATT CACATGAAGAGTGGTCCTGCCAGTAAATCTGGGAACAAATT < 41bp 0.75188919828802 0.547128508234802 0.26714146 0.23916823 prediction 0.409521380106436 Functional Loss - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44500310 chr19:44500313 stopgain 0.031 0 24 hm5C_associated_SNPs_94489 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44500313-44500330
64251 chr5 176491539 176491539 1 + T C rs143189601 176491538 + 176491518 176491558 41 CAAAAACAGTGGCATCATCCCTGGGCCAGATTCCAATGCAA CAAAAACAGTGGCATCATCCCCGGGCCAGATTCCAATGCAA < 41bp 0.70476046421451 0.468744191683661 0.75727713 0.85709697 prediction 0.40952092842902 Functional Loss - ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176491538 chr5:176491539 nonsynonymous SNV 0.564 2 22 hm5C_associated_SNPs_94490 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:176491520-176491540
64251 chr5 176491541 176491541 1 + G T LUSC 176491538 + 176491518 176491558 41 CAAAAACAGTGGCATCATCCCTGGGCCAGATTCCAATGCAA CAAAAACAGTGGCATCATCCCTGTGCCAGATTCCAATGCAA < 41bp 0.70476046421451 0.311557433275501 0.75727713 0.2079294 prediction 0.40952092842902 Functional Loss - ZNF346 ENSG00000113761 CDS Human protein_coding chr5:176491538 chr5:176491541 nonsynonymous SNV 0.719 2 24 hm5C_associated_SNPs_94491 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:176491530-176491555
64251 chr1 154247884 154247884 1 + C T SKCM 154247881 + 154247861 154247901 41 CTTTGTAGATAGTGGAGGAGCGCCGGACTGTGGTGGACAGT CTTTGTAGATAGTGGAGGAGCGCTGGACTGTGGTGGACAGT < 41bp 0.704754135894984 0.485356393440868 0.28845245 0.083212644 prediction 0.409508271789969 Functional Loss - HAX1 ENSG00000143575 CDS Human protein_coding chr1:154247881 chr1:154247884 nonsynonymous SNV 0.921 2 24 hm5C_associated_SNPs_94495 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:154247882-154247909
64251 chr16 69970276 69970276 1 + G A SKCM 69970273 + 69970253 69970293 41 TCATCCAGGACATGGAGATACTGGGCAAGGTGACGACCCAC TCATCCAGGACATGGAGATACTGAGCAAGGTGACGACCCAC < 41bp 0.814876597423745 0.610124458004424 0.70878375 0.7573838 prediction 0.409504278838641 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69970273 chr16:69970276 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_94497 0 0 1 LARP4 POSTAR2 ENCODE chr16:69970214-69970327
64251 chr11 93914021 93914021 1 + G A STAD 93914018 + 93913998 93914038 41 AGAATGCCCGACAGAGACTTCTGGATTCTTCTTGCTGATGA AGAATGCCCGACAGAGACTTCTGAATTCTTCTTGCTGATGA < 41bp 0.765851053855822 0.561100139350053 0.26830745 0.15342632 prediction 0.409501829011538 Functional Loss - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93914018 chr11:93914021 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_94499 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr11:93913999-93914032
64251 chr1 220267599 220267599 1 + C T rs2577154 220267597 + 220267577 220267617 41 CCTCGCGGGCCGGGCGCGGCCGCCCTGGCCACTGCCCGAAG CCTCGCGGGCCGGGCGCGGCCGTCCTGGCCACTGCCCGAAG < 41bp 0.797897911331895 0.593147807337131 0.71025836 0.44164032 prediction 0.409500207989528 Functional Loss - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220267597 chr1:220267599 nonsynonymous SNV 0.160 0 23 hm5C_associated_SNPs_94500 1 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:220267540-220267600
64251 chr21 30415863 30415863 1 + T C LUAD 30415862 + 30415842 30415882 41 AGAGAGAAGTGATATTCCTTCTGGAACAAGTAAGCACTTAC AGAGAGAAGTGATATTCCTTCCGGAACAAGTAAGCACTTAC < 41bp 0.827092526323952 0.622351663995889 0.11356461 0.21873343 prediction 0.409481724656126 Functional Loss - USP16 ENSG00000156256 CDS Human protein_coding chr21:30415862 chr21:30415863 synonymous SNV . 0 22 hm5C_associated_SNPs_94507 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr21:30415828-30415884
64251 chr2 63284082 63284082 1 + C T rs553400544 63284080 + 63284060 63284100 41 GGAGCGCGTCCCCAGCCTTCCGCGCACAGAGCCGCATCCCG GGAGCGCGTCCCCAGCCTTCCGTGCACAGAGCCGCATCCCG < 41bp 0.73980808729453 0.535068236136042 0.30615687 0.23359936 prediction 0.409479702316976 Functional Loss - OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63284080 chr2:63284082 . . 0 23 hm5C_associated_SNPs_94509 0 0 1 LIN28B POSTAR2 ENCODE chr2:63284005-63284119
64251 chr11 117163865 117163865 1 + G T UCEC 117163861 + 117163841 117163881 41 CCCGCCGGATGGGTGTATACCAGAGACTGCCTGTGTACAGC CCCGCCGGATGGGTGTATACCAGATACTGCCTGTGTACAGC < 41bp 0.719864462792028 0.515135296496043 0.6800506 0.34826845 prediction 0.40945833259197 Functional Loss - BACE1 ENSG00000186318 CDS Human protein_coding chr11:117163861 chr11:117163865 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_94519 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:117163844-117163869
64251 chr14 103574821 103574821 1 + T C OV 103574820 + 103574800 103574840 41 AAGATGACATCCAGCGGCACCTGGAGACTCTTATCCGGAGC AAGATGACATCCAGCGGCACCCGGAGACTCTTATCCGGAGC < 41bp 0.832355724869537 0.62762684304554 0.66131175 0.8619168 prediction 0.409457763647994 Functional Loss - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103574820 chr14:103574821 nonsynonymous SNV 0.918 3 22 hm5C_associated_SNPs_94520 0 0 2 GRWD1 POSTAR2 ENCODE chr14:103574806-103574861
64251 chr1 41157751 41157751 1 + C T rs544443421 41157749 + 41157729 41157769 41 GGGTCCGTGTGCCTCGTCGGCCCGGCCCGCGGGCTTTCTCC GGGTCCGTGTGCCTCGTCGGCCTGGCCCGCGGGCTTTCTCC < 41bp 0.75954803793446 0.554821987117572 0.047960818 0.06324953 prediction 0.409452101633777 Functional Loss - NFYC-AS1 ENSG00000066136 UTR5 Human protein_coding chr1:41157749 chr1:41157751 . . 0 23 hm5C_associated_SNPs_94522 0 0 3 XRN2 POSTAR2 ENCODE chr1:41157733-41157847
64251 chr10 5951256 5951256 1 + G A SKCM 5951253 + 5951233 5951273 41 CCCCGACCTCTACGCTGCTGCCGGGGTAGGTCTGGAGGCTG CCCCGACCTCTACGCTGCTGCCGAGGTAGGTCTGGAGGCTG < 41bp 0.704723592897671 0.44453674429363 0.90265036 0.8764913 prediction 0.409447185795343 Functional Loss - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951253 chr10:5951256 nonsynonymous SNV 0.080 1 24 hm5C_associated_SNPs_94527 0 0 7 FXR2 POSTAR2 GSE39682,GSM977620 chr10:5951237-5951256
64251 chr8 21859729 21859729 1 + G T STAD 21859727 + 21859707 21859747 41 AGAGGACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTG AGAGGACCACACCCCTGAACCATGAGAGCGACCGCTTTCTG < 41bp 0.915978676029465 0.711264327981127 0.90574694 0.10446313 prediction 0.409428696096675 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21859727 chr8:21859729 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_94536 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:21859705-21859730
64251 chr11 75277886 75277886 1 + C T rs150586616 75277884 + 75277864 75277904 41 AGCACTCCAAGATCAACTTCCGCGACAAGCGCAGCGCGCTG AGCACTCCAAGATCAACTTCCGTGACAAGCGCAGCGCGCTG < 41bp 0.862666227147684 0.657955907159457 0.13266468 0.11342436 prediction 0.409420639976454 Functional Loss - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277884 chr11:75277886 synonymous SNV . 0 23 hm5C_associated_SNPs_94543 1 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:75277855-75277889
64251 chr8 42958942 42958942 1 + T C UCEC 42958941 + 42958921 42958961 41 TGAGAACAGAAGTGAGACAGCTGAAGCGTGTTGGGGAAGGA TGAGAACAGAAGTGAGACAGCCGAAGCGTGTTGGGGAAGGA < 41bp 0.834990657757716 0.630285449281097 0.39972627 0.3210507 prediction 0.409410416953238 Functional Loss - POMK ENSG00000185900 CDS Human protein_coding chr8:42958941 chr8:42958942 nonsynonymous SNV 0.333 3 22 hm5C_associated_SNPs_94547 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:42958736-42958961
64251 chr19 21300057 21300057 1 + G A BLCA 21300054 + 21300034 21300074 41 TAGACACAAGAGAGTTCATACTGGAGAGAAACCCTTCAAAT TAGACACAAGAGAGTTCATACTGAAGAGAAACCCTTCAAAT < 41bp 0.790606656798891 0.585902118542355 0.17729172 0.053691 prediction 0.409409076513072 Functional Loss - ZNF714 ENSG00000160352 CDS Human protein_coding chr19:21300054 chr19:21300057 nonsynonymous SNV 0.010 2 24 hm5C_associated_SNPs_94548 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:21300052-21300109
64251 chrX 77373623 77373623 1 + G T UCEC 77373619 + 77373599 77373639 41 GAAGGAGCTGAACTACTTTGCAAAGGCCTTGGAGAGCCCAG GAAGGAGCTGAACTACTTTGCAAATGCCTTGGAGAGCCCAG < 41bp 0.704883197786065 0.500185971934178 0.61801094 0.4353338 prediction 0.409394451703773 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373619 chrX:77373623 nonsynonymous SNV 0.985 4 25 hm5C_associated_SNPs_94553 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:77373573-77373631
64251 chr19 8539121 8539121 1 + G A CESC 8539118 + 8539098 8539138 41 GGATCTGGGATGAACATGGGCAGGATAAATGGTAAGCATCG GGATCTGGGATGAACATGGGCAGAATAAATGGTAAGCATCG < 41bp 0.805833614262333 0.601137472508369 0.8049799 0.33293015 prediction 0.409392283507928 Functional Loss - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8539118 chr19:8539121 synonymous SNV . 0 24 hm5C_associated_SNPs_94554 0 0 34 TARDBP POSTAR2 DRA001158,DRS012387 chr19:8539048-8539121
64251 chr2 99181151 99181151 1 + C T ESCA 99181148 + 99181128 99181168 41 TCATTAAGCTGAGGAACTGCCTGCATGACGACGGCTTCCTG TCATTAAGCTGAGGAACTGCCTGTATGACGACGGCTTCCTG < 41bp 0.787061428244404 0.582378728801291 0.723385 0.39773262 prediction 0.409365398886225 Functional Loss - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99181148 chr2:99181151 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_94562 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:99181135-99181151
64251 chr11 60688429 60688429 1 + C T ESCA 60688426 + 60688406 60688446 41 TTCTTTGCTCTGTCTGGGATCGCCGCACAGCTGCTGAATGC TTCTTTGCTCTGTCTGGGATCGCTGCACAGCTGCTGAATGC < 41bp 0.70468257406577 0.486242043031433 0.90286577 0.35631976 prediction 0.409365148131539 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60688426 chr11:60688429 synonymous SNV . 0 24 hm5C_associated_SNPs_94563 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:60688409-60688441
64251 chr13 88327846 88327846 1 + G T LUAD 88327844 + 88327824 88327864 41 TTAACTGTGAGCTGTGAAAACCGGGGGATCATCAGTCTCTC TTAACTGTGAGCTGTGAAAACCTGGGGATCATCAGTCTCTC < 41bp 0.704679812272076 0.360258943338679 0.9038886 0.257645 prediction 0.409359624544153 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327844 chr13:88327846 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_94566 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:88327812-88327852
64251 chr15 40702870 40702870 1 + G T LUAD 40702868 + 40702848 40702888 41 TGGGCTACCTGGAGCATGTGCTGGTGATGGAGGAGATATCC TGGGCTACCTGGAGCATGTGCTTGTGATGGAGGAGATATCC < 41bp 0.704678704336531 0.340716060287313 0.6831597 0.24039537 prediction 0.409357408673062 Functional Loss - IVD ENSG00000128928 CDS Human protein_coding chr15:40702868 chr15:40702870 synonymous SNV . 0 23 hm5C_associated_SNPs_94568 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:40702852-40702887
64251 chr12 56863217 56863217 1 + G A SKCM 56863214 + 56863194 56863234 41 CTGTTGCTGGAGTATGAGGCCCAGAAGCTGAGCCTGGTGGA CTGTTGCTGGAGTATGAGGCCCAAAAGCTGAGCCTGGTGGA < 41bp 0.70467463122927 0.455462714813372 0.82473636 0.30972326 prediction 0.40934926245854 Functional Loss - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863214 chr12:56863217 synonymous SNV . 0 24 hm5C_associated_SNPs_94570 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:56863185-56863222
64251 chr12 66232315 66232315 1 + G A SKCM 66232312 + 66232292 66232332 41 TTTGCAGAAAGCAGAAGCCACTGGAGAAAAACGGCCAAGAG TTTGCAGAAAGCAGAAGCCACTGAAGAAAAACGGCCAAGAG < 41bp 0.704670427435738 0.491453531740355 0.22245717 0.14757028 prediction 0.409340854871476 Functional Loss - HMGA2 ENSG00000149948 CDS Human protein_coding chr12:66232312 chr12:66232315 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_94574 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:66232300-66232320
64251 chr17 73520479 73520479 1 + G A BLCA 73520476 + 73520456 73520496 41 TCAGGGACTTCACGTTGCCCCAGGATGTGGGGCACTGACCT TCAGGGACTTCACGTTGCCCCAGAATGTGGGGCACTGACCT < 41bp 0.813193581213739 0.608531622496227 0.55533934 0.038627177 prediction 0.409323917435023 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73520476 chr17:73520479 nonsynonymous SNV 0.243 3 24 hm5C_associated_SNPs_94577 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73520479-73520541
64251 chr7 116312565 116312565 1 + G T rs555011707 116312562 + 116312542 116312582 41 GCTGACTTGCTGAGAGGAGGCGGGGAGGCGCGGAGCGCGCG GCTGACTTGCTGAGAGGAGGCGGTGAGGCGCGGAGCGCGCG < 41bp 0.826155817363217 0.621494043935158 0.9194217 0.87464964 prediction 0.409323546856118 Functional Loss - MET ENSG00000105976 UTR5 Human protein_coding chr7:116312562 chr7:116312565 . . 0 24 hm5C_associated_SNPs_94578 0 0 4 DDX3X POSTAR2 ENCODE chr7:116312556-116312635
64251 chr8 9413533 9413533 1 + G T KIRC 9413529 + 9413509 9413549 41 CGCCCCAGGGGCTTCAGCGCCGCCGCCGCCACCTCCTCCCC CGCCCCAGGGGCTTCAGCGCCGCCTCCGCCACCTCCTCCCC < 41bp 0.704655750590486 0.489641518974998 0.27163884 0.05950108 prediction 0.409311501180972 Functional Loss - TNKS ENSG00000173273 CDS Human protein_coding chr8:9413529 chr8:9413533 synonymous SNV . 0 25 hm5C_associated_SNPs_94582 0 0 3 UCHL5 POSTAR2 ENCODE chr8:9413484-9413539
64251 chr3 183860063 183860063 1 + G A rs138857267 183860060 + 183860040 183860080 41 AATATCACGCTGCCTGAGGGCTCGGTGATCTCTTTGCACCC AATATCACGCTGCCTGAGGGCTCAGTGATCTCTTTGCACCC < 41bp 0.823678378411145 0.61902442623716 0.32205933 0.24133614 prediction 0.409307904347971 Functional Loss - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860060 chr3:183860063 synonymous SNV . 0 24 hm5C_associated_SNPs_94583 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:183860022-183860065
64251 chr19 5131974 5131974 1 + G A STAD 5131971 + 5131951 5131991 41 TCCCCTGGGCCGGCCGCCCACCCGGTCCCCACTGTCGGTGG TCCCCTGGGCCGGCCGCCCACCCAGTCCCCACTGTCGGTGG < 41bp 0.70465014755339 0.448985432292785 0.0471617 0.013756841 prediction 0.409300295106781 Functional Loss - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5131971 chr19:5131974 nonsynonymous SNV 0.598 4 24 hm5C_associated_SNPs_94584 0 0 3 GRWD1 POSTAR2 ENCODE chr19:5131925-5131993
64251 chr19 47763903 47763903 1 + G T LUAD 47763901 + 47763881 47763921 41 ACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGCCGGACTCC ACCCCTCGGCCCCCAGGGGCCATCAAGGGGGGCCGGACTCC < 41bp 0.918858573805348 0.71420979867352 0.7620809 0.65063107 prediction 0.409297550263656 Functional Loss - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763901 chr19:47763903 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_94586 0 0 2 BUD13 POSTAR2 ENCODE chr19:47763835-47763909
64251 chr12 48175012 48175012 1 + C T rs575728678 48175010 + 48174990 48175030 41 AATGAGGCCAGACTCAGGGTCACGGGGAATGTGCTTCTGCC AATGAGGCCAGACTCAGGGTCATGGGGAATGTGCTTCTGCC < 41bp 0.704647126596339 0.480210355147432 0.30918765 0.37468374 prediction 0.409294253192678 Functional Loss - SLC48A1 ENSG00000211584 UTR3 Human protein_coding chr12:48175010 chr12:48175012 . . 0 23 hm5C_associated_SNPs_94588 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:48174990-48175034
64251 chr1 154229595 154229595 1 + C T LUSC 154229592 + 154229572 154229612 41 TCTTCCTCCAGCACTTTTTCCACCACATCCAGCACAGTCTC TCTTCCTCCAGCACTTTTTCCACTACATCCAGCACAGTCTC < 41bp 0.753600740130835 0.548955119424901 0.053607643 0.14952299 prediction 0.409291241411866 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229592 chr1:154229595 synonymous SNV . 0 24 hm5C_associated_SNPs_94590 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:154229560-154229600
64251 chr17 53851103 53851103 1 + C T LUSC 53851100 + 53851080 53851120 41 TGCAGTATGTCTACCTTCGGCAGCGGCGAGACCTGGACATG TGCAGTATGTCTACCTTCGGCAGTGGCGAGACCTGGACATG < 41bp 0.725557960057848 0.520913311741932 0.8129251 0.45915025 prediction 0.409289296631833 Functional Loss - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851100 chr17:53851103 nonsynonymous SNV 0.221 0 24 hm5C_associated_SNPs_94591 0 0 5 GRWD1 POSTAR2 ENCODE chr17:53851085-53851133
64251 chr19 2246936 2246936 1 + C T COAD 2246933 + 2246913 2246953 41 GCCACGTCACCGCTTCATGTCTGCGTACGAGCAGAGGATCG GCCACGTCACCGCTTCATGTCTGTGTACGAGCAGAGGATCG < 41bp 0.704641386889164 0.488917284592902 0.13473406 0.052761137 prediction 0.409282773778327 Functional Loss - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2246933 chr19:2246936 nonsynonymous SNV 0.586 5 24 hm5C_associated_SNPs_94593 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:2246878-2246938
64251 chr2 3392114 3392114 1 + G A COAD 3392111 + 3392091 3392131 41 ATTTCCGTCAGCAATCCCGGCGCGGGCTCCCCGGCCCCCGC ATTTCCGTCAGCAATCCCGGCGCAGGCTCCCCGGCCCCCGC < 41bp 0.8403235936864 0.635689174768209 0.6942743 0.3159387 prediction 0.409268837836382 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3392111 chr2:3392114 synonymous SNV . 0 24 hm5C_associated_SNPs_94597 0 0 1 RBM15 POSTAR2 ENCODE chr2:3392082-3392143
64251 chr3 66431078 66431078 1 - C A rs2279289 66431082 - 66431062 66431102 41 CTGGGTCCTGCCCCGAGTGCCAAGGGTCGCTCTACCCCAGT CTGGGTCCTGCCCCGAGTGCCAAGTGTCGCTCTACCCCAGT < 41bp 0.708312874893928 0.503688206125524 0.91036355 0.7564335 prediction 0.409249337536809 Functional Loss - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431082 chr3:66431078 nonsynonymous SNV 0.735 2 25 hm5C_associated_SNPs_94606 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:66431069-66431109
64251 chr16 72130083 72130083 1 + G A LGG 72130080 + 72130060 72130100 41 GGGGACACCAGTGAGGATGCCTCGATCCATCGATTGGAAGG GGGGACACCAGTGAGGATGCCTCAATCCATCGATTGGAAGG < 41bp 0.81200513796521 0.607391543708595 0.5761698 0.35530674 prediction 0.40922718851323 Functional Loss - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72130080 chr16:72130083 synonymous SNV . 0 24 hm5C_associated_SNPs_94610 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:72130055-72130085
64251 chr6 111345530 111345530 1 + G A SKCM 111345527 + 111345507 111345547 41 ATGAAAATGCCAAAAGCTCTCAAGGTATATAACTTAGAGCT ATGAAAATGCCAAAAGCTCTCAAAGTATATAACTTAGAGCT < 41bp 0.759055083045038 0.55444211475341 0.90037453 0.2677269 prediction 0.409225936583256 Functional Loss - RPF2 ENSG00000197498 CDS Human protein_coding chr6:111345527 chr6:111345530 synonymous SNV . 0 24 hm5C_associated_SNPs_94612 0 0 2 UCHL5 POSTAR2 ENCODE chr6:111345505-111345531
64251 chr3 37067384 37067384 1 + T C LUSC 37067383 + 37067363 37067403 41 GGCAGCAAGATGAGGAGATGCTTGAACTCCCAGCCCCTGCT GGCAGCAAGATGAGGAGATGCCTGAACTCCCAGCCCCTGCT < 41bp 0.773353159407052 0.568744330145151 0.35762346 0.4282353 prediction 0.409217658523801 Functional Loss - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37067383 chr3:37067384 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_94613 0 0 2 FXR2 POSTAR2 ENCODE chr3:37067251-37067384
64251 chr1 109242235 109242235 1 + C T UCEC 109242232 + 109242212 109242252 41 AAGAAGACAAAGATGATAGGCGGCACAGAGATGACAAAAGA AAGAAGACAAAGATGATAGGCGGTACAGAGATGACAAAAGA < 41bp 0.704608142178894 0.480577170898088 0.14511946 0.15086171 prediction 0.409216284357788 Functional Loss - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109242232 chr1:109242235 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_94614 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:109242208-109242257
64251 chr2 239358025 239358025 1 + C T rs73092608 239358023 + 239358003 239358043 41 AGTCCTCCCTAGGAGAGGGGCTCGATGGGCTGGGGGAAGGA AGTCCTCCCTAGGAGAGGGGCTTGATGGGCTGGGGGAAGGA < 41bp 0.791784202844691 0.587176509394174 0.6445524 0.8314654 prediction 0.409215386901035 Functional Loss - ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239358023 chr2:239358025 . . 0 23 hm5C_associated_SNPs_94615 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:239358017-239358043
64251 chr5 132150919 132150919 1 + G A SKCM 132150916 + 132150896 132150936 41 AAATCTCTCGTCGACCTACTCCGGGGCCTTTAGCTGGTCTA AAATCTCTCGTCGACCTACTCCGAGGCCTTTAGCTGGTCTA < 41bp 0.704604458220164 0.45155197783908 0.95793676 0.9423785 prediction 0.409208916440328 Functional Loss - SOWAHA ENSG00000198944 CDS Human protein_coding chr5:132150916 chr5:132150919 nonsynonymous SNV 0.540 1 24 hm5C_associated_SNPs_94617 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:132150899-132150937
64251 chr19 16296542 16296542 1 + C T COAD 16296539 + 16296519 16296559 41 CGGCCTGGACAAGCGGACCCCGGCCCAGGCGGCCTTCGAGA CGGCCTGGACAAGCGGACCCCGGTCCAGGCGGCCTTCGAGA < 41bp 0.70459623945859 0.494907518833405 0.32294112 0.3743456 prediction 0.409192478917179 Functional Loss - FAM32A ENSG00000105058 CDS Human protein_coding chr19:16296539 chr19:16296542 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_94625 0 0 4 GRWD1 POSTAR2 ENCODE chr19:16296496-16296573
64251 chr3 150128574 150128574 1 + G C rs144273585 150128570 + 150128550 150128590 41 TCCTGCCGGGGCTGGGCAGCCCCAGTCCGTGCCTCCGCCGC TCCTGCCGGGGCTGGGCAGCCCCACTCCGTGCCTCCGCCGC < 41bp 0.704595005683846 0.420895730759741 0.887256 0.3363421 prediction 0.409190011367692 Functional Loss - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128570 chr3:150128574 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_94626 0 0 2 RBM15 POSTAR2 ENCODE chr3:150128493-150128577
64251 chr16 19710844 19710844 1 + G A STAD 19710841 + 19710821 19710861 41 CAGGCCCTGAAGCGCCAGAGCTCGTTGGGCCTTTCCTTCTT CAGGCCCTGAAGCGCCAGAGCTCATTGGGCCTTTCCTTCTT < 41bp 0.70459320104462 0.454516449791109 0.08038366 0.087887704 prediction 0.409186402089241 Functional Loss - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19710841 chr16:19710844 synonymous SNV . 0 24 hm5C_associated_SNPs_94628 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:19710834-19710855
64251 chr5 132412369 132412369 1 + G A UCEC 132412366 + 132412346 132412386 41 GTTCTGGCCACTGCATTTGACACGACATTGGGAGGTAGAAA GTTCTGGCCACTGCATTTGACACAACATTGGGAGGTAGAAA < 41bp 0.704591287823656 0.474125080162871 0.026544273 0.018273741 prediction 0.409182575647311 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132412366 chr5:132412369 synonymous SNV . 0 24 hm5C_associated_SNPs_94631 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:132412347-132412383
64251 chr2 239040037 239040037 1 + G A SKCM 239040034 + 239040014 239040054 41 GAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTT GAGCACCTGGGCACCCACGGCTGAGAGGCTGTGCGCGCCTT < 41bp 0.825562532860235 0.620974052132132 0.88390243 0.5026104 prediction 0.409176961456204 Functional Loss - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239040034 chr2:239040037 stopgain 0.996 1 24 hm5C_associated_SNPs_94632 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:239040024-239040044
64251 chr17 6348680 6348680 1 + G A KIRC 6348677 + 6348657 6348697 41 AGCCAGGTCAGCAGGGCCTCCAGGCTGCAGCTCGCTCAGCT AGCCAGGTCAGCAGGGCCTCCAGACTGCAGCTCGCTCAGCT < 41bp 0.704586071944477 0.451711702812431 0.899639 0.85188746 prediction 0.409172143888954 Functional Loss - PIMREG ENSG00000129195 CDS Human protein_coding chr17:6348677 chr17:6348680 nonsynonymous SNV 0.977 0 24 hm5C_associated_SNPs_94636 0 0 1 SF3B1 POSTAR2 ENCODE chr17:6348645-6348687
64251 chr4 159606354 159606354 1 + G T UCEC 159606352 + 159606332 159606372 41 CCTTGGTGTTGAAGTATACCCTGGTTATGCAGCTGCTGAGG CCTTGGTGTTGAAGTATACCCTTGTTATGCAGCTGCTGAGG < 41bp 0.704582480480764 0.366090490117791 0.40783027 0.12114555 prediction 0.409164960961527 Functional Loss - ETFDH ENSG00000171503 CDS Human protein_coding chr4:159606352 chr4:159606354 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_94639 0 0 1 ZRANB2 POSTAR2 ENCODE chr4:159606315-159606374
64251 chr12 27470900 27470900 1 + G A UCEC 27470897 + 27470877 27470917 41 TGATGAACTGGAAAGAAACTCTGGTATTTCCTCCAGAGGTA TGATGAACTGGAAAGAAACTCTGATATTTCCTCCAGAGGTA < 41bp 0.704582475776912 0.470838294321723 0.07463136 0.049613684 prediction 0.409164951553824 Functional Loss - STK38L ENSG00000211455 CDS Human protein_coding chr12:27470897 chr12:27470900 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_94640 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:27470884-27470919
64251 chr6 89856219 89856219 1 + G T MESO 89856215 + 89856195 89856235 41 TCTGCGAGTACGACGCGCTGCCCGGCATCGGCCACGCCTGC TCTGCGAGTACGACGCGCTGCCCGTCATCGGCCACGCCTGC < 41bp 0.704581322134219 0.498105417660452 0.061332792 0.03250739 prediction 0.409162644268437 Functional Loss - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89856215 chr6:89856219 nonsynonymous SNV 0.979 1 25 hm5C_associated_SNPs_94641 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:89856200-89856220
64251 chr3 4358391 4358391 1 + C T UCEC 4358388 + 4358368 4358408 41 AGTGGATTTTATATGACAACCGGCGACGATCAGCTCAGTGG AGTGGATTTTATATGACAACCGGTGACGATCAGCTCAGTGG < 41bp 0.753673000041016 0.549092916702937 0.3755074 0.14083853 prediction 0.409160166676158 Functional Loss - SETMAR ENSG00000170364 CDS Human protein_coding chr3:4358388 chr3:4358391 stopgain 0.913 0 24 hm5C_associated_SNPs_94644 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:4358372-4358400
64251 chr7 157207011 157207011 1 + G T rs76770468 157207007 + 157206987 157207027 41 GTCCCTTGGGTCCCGGGGCACGAGGCTCCTCTGAGGGACAC GTCCCTTGGGTCCCGGGGCACGAGTCTCCTCTGAGGGACAC < 41bp 0.724763100324974 0.520183659772998 0.92810863 0.47371075 prediction 0.409158881103951 Functional Loss - DNAJB6 ENSG00000105993 intronic Human protein_coding chr7:157207007 chr7:157207011 . . 0 25 hm5C_associated_SNPs_94645 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:157207005-157207020
64251 chr3 196449369 196449369 1 + C T GBM 196449366 + 196449346 196449386 41 CTTAATTAAACAGGACATTCCTGCAGGACTTTATGTGGATC CTTAATTAAACAGGACATTCCTGTAGGACTTTATGTGGATC < 41bp 0.789847898489761 0.58526947574336 0.040397674 0.028722793 prediction 0.409156845492802 Functional Loss - PIGX ENSG00000163964 CDS Human protein_coding chr3:196449366 chr3:196449369 nonsynonymous SNV 0.611 0 24 hm5C_associated_SNPs_94648 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:196449350-196449376
64251 chr19 38780810 38780810 1 + G A COAD 38780807 + 38780787 38780827 41 GCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTGACGTGG GCCTTGCCGTGCATCCTTCCCACACTGGTACTTTGACGTGG < 41bp 0.70457143327557 0.443463764885688 0.067380965 0.0442746 prediction 0.409142866551141 Functional Loss - SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780807 chr19:38780810 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_94652 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chr6 125283978 125283978 1 + C T BLCA 125283976 + 125283956 125283996 41 GACTGGCACTCACCGGGCCTCTCAATCCCCAGACCTTGCCA GACTGGCACTCACCGGGCCTCTTAATCCCCAGACCTTGCCA < 41bp 0.704570265672039 0.436917051930409 0.7477945 0.12398338 prediction 0.409140531344078 Functional Loss - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125283976 chr6:125283978 synonymous SNV . 0 23 hm5C_associated_SNPs_94654 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:125283972-125283998
64251 chr20 47846779 47846779 1 + G T LUSC 47846775 + 47846755 47846795 41 TCAGGAAGCAGCTCTTCGGGCAGCGCCTGACATCCTCATCG TCAGGAAGCAGCTCTTCGGGCAGCTCCTGACATCCTCATCG < 41bp 0.747771181641543 0.54320108177136 0.13237333 0.085601 prediction 0.409140199740367 Functional Loss - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47846775 chr20:47846779 synonymous SNV . 0 25 hm5C_associated_SNPs_94655 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:47846752-47846815
64251 chr2 113955401 113955401 1 + G A STAD 113955398 + 113955378 113955418 41 GAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCAC GAGCCCGTGGGGGTGCACCACTCACTGGCCACCCCCGCCAC < 41bp 0.838507331008118 0.633937601059231 0.34004653 0.07044548 prediction 0.409139459897775 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113955398 chr2:113955401 synonymous SNV . 0 24 hm5C_associated_SNPs_94656 0 0 1 PPIG POSTAR2 ENCODE chr2:113955322-113955409
64251 chr16 771923 771923 1 + C T LUAD 771921 + 771901 771941 41 GTGCCGGCAGCGTCTGCTATCGCCGCAAGGATCTCTGGAAG GTGCCGGCAGCGTCTGCTATCGTCGCAAGGATCTCTGGAAG < 41bp 0.813586429842175 0.609018028526423 0.84404635 0.85893893 prediction 0.409136802631505 Functional Loss - FAM173A ENSG00000103254 CDS Human protein_coding chr16:771921 chr16:771923 synonymous SNV . 0 23 hm5C_associated_SNPs_94657 0 0 1 SRSF1 POSTAR2 ENCODE chr16:771915-771974
64251 chr22 50959459 50959459 1 + C T rs559989268 50959456 + 50959436 50959476 41 GGGGCCCCAGAGCCTGCATCCTGCGTGAAGGTAGGAGTGTT GGGGCCCCAGAGCCTGCATCCTGTGTGAAGGTAGGAGTGTT < 41bp 0.746647412874076 0.54208172432688 0.339185 0.38153362 prediction 0.409131377094391 Functional Loss - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50959456 chr22:50959459 synonymous SNV . 0 24 hm5C_associated_SNPs_94662 0 0 2 PRPF8 POSTAR2 ENCODE chr22:50959458-50959524
64251 chr16 81711959 81711959 1 + C T COAD 81711956 + 81711936 81711976 41 ACCGGAAGCCCACTTTACCTCTGCGCCTTCTGCACCCCAGC ACCGGAAGCCCACTTTACCTCTGTGCCTTCTGCACCCCAGC < 41bp 0.712490981653111 0.507926149993683 0.2902033 0.42438596 prediction 0.409129663318856 Functional Loss - CMIP ENSG00000153815 CDS Human protein_coding chr16:81711956 chr16:81711959 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94664 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:81711935-81711974
64251 chr14 75928231 75928231 1 + C T UCEC 75928228 + 75928208 75928248 41 AGGAGCGCACGGAGTTTCTGCAGCGGGTGAGCTGACCGGGT AGGAGCGCACGGAGTTTCTGCAGTGGGTGAGCTGACCGGGT < 41bp 0.745874869641694 0.541312091385493 0.60786813 0.34475204 prediction 0.409125556512404 Functional Loss - JDP2 ENSG00000140044 CDS Human protein_coding chr14:75928228 chr14:75928231 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_94665 0 0 1 XRN2 POSTAR2 ENCODE chr14:75928228-75928279
64251 chr1 243419493 243419493 1 + G T UCEC 243419489 + 243419469 243419509 41 TGCGTGCATGGCGAAGTCCCCGGAGAACTCTACCCTGGAGG TGCGTGCATGGCGAAGTCCCCGGATAACTCTACCCTGGAGG < 41bp 0.726269486105566 0.521707052097161 0.87411344 0.87702084 prediction 0.40912486801681 Functional Loss - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243419489 chr1:243419493 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_94666 0 0 13 EIF3B POSTAR2 GSE65004,GSM1585667 chr1:243419474-243419505
64251 chr5 54456978 54456978 1 + G C LUSC 54456974 + 54456954 54456994 41 GAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTTTTGC GAATCGGAGCCCCGCCCAAGCAAGCAAGTAGAATCTTTTGC < 41bp 0.704562158111921 0.416128779973895 0.8526784 0.6811795 prediction 0.409124316223841 Functional Loss - GPX8 ENSG00000164294 CDS Human protein_coding chr5:54456974 chr5:54456978 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_94667 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:54456945-54456988
64251 chr18 12325697 12325697 1 + C T UCEC 12325694 + 12325674 12325714 41 GCCAGGAACATGATGGCCGCCTGCGATCCGCGCCATGGCCG GCCAGGAACATGATGGCCGCCTGTGATCCGCGCCATGGCCG < 41bp 0.736723246124803 0.532161966129383 0.06311372 0.040192395 prediction 0.40912255999084 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325694 chr18:12325697 synonymous SNV . 0 24 hm5C_associated_SNPs_94670 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr18:12325680-12325700
64251 chr19 53056556 53056556 1 + G A rs541198521 53056553 + 53056533 53056573 41 AGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTT AGAAATGGCCATGAAGCACCCACAACAAAAATAAAAAAGTT < 41bp 0.704559833945026 0.484671737510815 0.31776738 0.26831153 prediction 0.409119667890052 Functional Loss - ZNF808 ENSG00000198482 CDS Human protein_coding chr19:53056553 chr19:53056556 synonymous SNV . 0 24 hm5C_associated_SNPs_94671 0 0 1 UCHL5 POSTAR2 ENCODE chr19:53056479-53056559
64251 chr19 53056555 53056555 1 + C T UCEC 53056553 + 53056533 53056573 41 AGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTT AGAAATGGCCATGAAGCACCCATGACAAAAATAAAAAAGTT < 41bp 0.704559833945026 0.445650209474206 0.31776738 0.15018582 prediction 0.409119667890052 Functional Loss - ZNF808 ENSG00000198482 CDS Human protein_coding chr19:53056553 chr19:53056555 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_94672 0 0 1 UCHL5 POSTAR2 ENCODE chr19:53056479-53056559
64251 chr19 37734103 37734103 1 + G T SARC 37734099 + 37734079 37734119 41 AATGTGGCAAAGCCTTTACCCAGAGCTCAAAGCTTGTTCAA AATGTGGCAAAGCCTTTACCCAGATCTCAAAGCTTGTTCAA < 41bp 0.704558751939653 0.493869178483547 0.8689804 0.45230198 prediction 0.409117503879306 Functional Loss - ZNF383 ENSG00000188283 CDS Human protein_coding chr19:37734099 chr19:37734103 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_94675 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr19:37734069-37734107
64251 chr5 179155634 179155634 1 + C T UCEC 179155632 + 179155612 179155652 41 ATCACCAAGAAACAGAAAGCCACGAAGAGAGTGAAACAATC ATCACCAAGAAACAGAAAGCCATGAAGAGAGTGAAACAATC < 41bp 0.704558270019937 0.418376648376917 0.22818714 0.30401987 prediction 0.409116540039874 Functional Loss - CANX ENSG00000127022 CDS Human protein_coding chr5:179155632 chr5:179155634 stopgain 1.000 1 23 hm5C_associated_SNPs_94677 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:179155583-179155641
64251 chr6 10891800 10891800 1 + G A BLCA 10891797 + 10891777 10891817 41 AAGACAGGACTGGGAAGGCCCAGGATGATGCTTTCTGGGTA AAGACAGGACTGGGAAGGCCCAGAATGATGCTTTCTGGGTA < 41bp 0.81195019617744 0.607393289441012 0.5878676 0.33131823 prediction 0.409113813472856 Functional Loss - SYCP2L ENSG00000153157 CDS Human protein_coding chr6:10891797 chr6:10891800 nonsynonymous SNV 0.127 0 24 hm5C_associated_SNPs_94678 0 0 3 BUD13 POSTAR2 ENCODE chr6:10891793-10891800
64251 chr17 40997271 40997271 1 + C T BLCA 40997269 + 40997249 40997289 41 GGCAGCTGTGCATGCCACCCCTCGGGGCTTGCGCTCAGGGG GGCAGCTGTGCATGCCACCCCTTGGGGCTTGCGCTCAGGGG < 41bp 0.842777888797112 0.63822728580169 0.10095638 0.13146865 prediction 0.409101205990845 Functional Loss - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997269 chr17:40997271 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_94683 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:40997208-40997275
64251 chr19 58005412 58005412 1 + C T BRCA 58005410 + 58005390 58005430 41 GGGAAGTTTTTTCGCCACAACTCCAGTCTTTTTAAACATCG GGGAAGTTTTTTCGCCACAACTTCAGTCTTTTTAAACATCG < 41bp 0.704547970976593 0.427240696377413 0.93197817 0.08425307 prediction 0.409095941953185 Functional Loss - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58005410 chr19:58005412 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_94684 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:58005403-58005430
64251 chr10 104390030 104390030 1 + C T rs2298277 104390027 + 104390007 104390047 41 AAGGACAAGTGTGAGGAAGACTGCGCAGTGCCACCCCGCAG AAGGACAAGTGTGAGGAAGACTGTGCAGTGCCACCCCGCAG < 41bp 0.706707031839319 0.502168030288558 0.21890256 0.2127116 prediction 0.409078003101521 Functional Loss - SUFU ENSG00000107882 UTR3 Human protein_coding chr10:104390027 chr10:104390030 . . 0 24 hm5C_associated_SNPs_94689 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:104390013-104390047
64251 chr1 160324052 160324052 1 + G T SARC 160324049 + 160324029 160324069 41 GAAACATCTCTGGCGTTGTTCTGGCTGACCACTCTGGTGCC GAAACATCTCTGGCGTTGTTCTGTCTGACCACTCTGGTGCC < 41bp 0.704537597025716 0.299008610846498 0.8760053 0.47791138 prediction 0.409075194051431 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160324049 chr1:160324052 nonsynonymous SNV 0.945 0 24 hm5C_associated_SNPs_94692 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:160324029-160324057
64251 chr17 73124919 73124919 1 + C T LUSC 73124916 + 73124896 73124936 41 CACGCTCATGCACCTGAGCCCGCCGGGCCGCAGCTTTCTCC CACGCTCATGCACCTGAGCCCGCTGGGCCGCAGCTTTCTCC < 41bp 0.746140223393707 0.541604994562201 0.7346581 0.41198123 prediction 0.409070457663011 Functional Loss - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73124916 chr17:73124919 nonsynonymous SNV 0.016 1 24 hm5C_associated_SNPs_94694 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:73124917-73124950
64251 chr15 25332698 25332698 1 + G A CESC 25332695 + 25332675 25332715 41 TTGGAGATGGCAGGAAGCCCCTGGAAACACATGGTGTGGAC TTGGAGATGGCAGGAAGCCCCTGAAAACACATGGTGTGGAC < 41bp 0.79257339655278 0.588042671993551 0.5479885 0.09679636 prediction 0.409061449118458 Functional Loss - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25332695 chr15:25332698 . . 0 24 hm5C_associated_SNPs_94697 0 0 5 EIF3D POSTAR2 ENCODE chr15:25332647-25332749
64251 chr3 9965627 9965627 1 + G T BLCA 9965625 + 9965605 9965645 41 GCATCTGGTTCTGAATGTCTCTGAGGAGCAGCACTTCGGCC GCATCTGGTTCTGAATGTCTCTTAGGAGCAGCACTTCGGCC < 41bp 0.704525498966517 0.366330405409376 0.26326472 0.058918744 prediction 0.409050997933033 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9965625 chr3:9965627 stopgain 0.842 0 23 hm5C_associated_SNPs_94701 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:9965626-9965627
64251 chr1 207244550 207244550 1 + A C UCEC 207244546 + 207244526 207244566 41 TTTTCAGATGAGCTACCATACTTGAGATGCCCTCTCCATAC TTTTCAGATGAGCTACCATACTTGCGATGCCCTCTCCATAC < 41bp 0.704524072510302 0.289997780348059 0.26180375 0.21992663 prediction 0.409048145020604 Functional Loss - PFKFB2 ENSG00000123836 CDS Human protein_coding chr1:207244546 chr1:207244550 synonymous SNV . 0 25 hm5C_associated_SNPs_94705 0 0 1 UCHL5 POSTAR2 ENCODE chr1:207244543-207244597
64251 chr11 119206996 119206996 1 + G A OV 119206993 + 119206973 119207013 41 GTCATCTGCCAGGACCAGAGCAAGACAGTGTTGCTCCTGCC GTCATCTGCCAGGACCAGAGCAAAACAGTGTTGCTCCTGCC < 41bp 0.818075782111692 0.61355585524629 0.867074 0.8431124 prediction 0.409039853730804 Functional Loss - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206993 chr11:119206996 synonymous SNV . 0 24 hm5C_associated_SNPs_94709 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:119206960-119207020
64251 chr18 77894782 77894782 1 + C T LUAD 77894780 + 77894760 77894800 41 TGTGGGCCAGACAGCTCCGTCACGGGTTCTTCCCCCAGGCC TGTGGGCCAGACAGCTCCGTCATGGGTTCTTCCCCCAGGCC < 41bp 0.831998666402705 0.627481928232488 0.8434082 0.8590394 prediction 0.409033476340434 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894780 chr18:77894782 nonsynonymous SNV 0.942 2 23 hm5C_associated_SNPs_94710 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr18:77894769-77894800
64251 chrX 48337472 48337472 1 + C T UCEC 48337469 + 48337449 48337489 41 CCAGCACTTTAAGGGCTGCCCTGCGGACCTAGTGGTGTGTG CCAGCACTTTAAGGGCTGCCCTGTGGACCTAGTGGTGTGTG < 41bp 0.765816530175144 0.561301688603032 0.36059815 0.11896235 prediction 0.409029683144223 Functional Loss - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48337469 chrX:48337472 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_94716 0 0 1 PPIG POSTAR2 ENCODE chrX:48337444-48337502
64251 chr17 25636248 25636248 1 + T C UCEC 25636247 + 25636227 25636267 41 GGCTACTGCATCTTATGATACTCGAGTATATATCTGGGATC GGCTACTGCATCTTATGATACCCGAGTATATATCTGGGATC < 41bp 0.822166117005344 0.617652589529619 0.25671786 0.2773863 prediction 0.40902705495145 Functional Loss - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25636247 chr17:25636248 synonymous SNV . 0 22 hm5C_associated_SNPs_94718 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:25636219-25636250
64251 chr2 109336129 109336129 1 + C T BLCA 109336127 + 109336107 109336147 41 GCAGGGCTCCACCCCGTCGCCTCGACAGGTGAGTGGGTCTC GCAGGGCTCCACCCCGTCGCCTTGACAGGTGAGTGGGTCTC < 41bp 0.812129998107154 0.607619947828036 0.49761647 0.10714862 prediction 0.409020100558237 Functional Loss - RANBP2 ENSG00000153201 CDS Human protein_coding chr2:109336127 chr2:109336129 stopgain 0.775 0 23 hm5C_associated_SNPs_94721 0 0 11 BUD13 POSTAR2 ENCODE chr2:109336088-109336203
64251 chr19 12903494 12903494 1 + C T KIRC 12903492 + 12903472 12903512 41 TGGAGGACAAGGTGAAGACGCTCAAGGCCGAGAACGCGGGG TGGAGGACAAGGTGAAGACGCTTAAGGCCGAGAACGCGGGG < 41bp 0.835081216701722 0.630571532522765 0.53145474 0.45392433 prediction 0.409019368357913 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12903492 chr19:12903494 synonymous SNV . 0 23 hm5C_associated_SNPs_94722 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:12903469-12903496
64251 chr19 45683191 45683191 1 + C T rs187399565 45683188 + 45683168 45683208 41 GATTCTACTTCCCAACCTGACTGCAATTTGGGGGTAGGCCT GATTCTACTTCCCAACCTGACTGTAATTTGGGGGTAGGCCT < 41bp 0.725340959626378 0.52083625359045 0.19689536 0.087361544 prediction 0.409009412071856 Functional Loss - BLOC1S3 ENSG00000189114;ENSG00000267545 UTR3 Human other chr19:45683188 chr19:45683191 . . 0 24 hm5C_associated_SNPs_94726 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:45683180-45683200
64251 chr11 111857640 111857640 1 + G A UCEC 111857637 + 111857617 111857657 41 ATCAGAGTATGGAGGAGAATCAGGACTTAAAGGTATGTCAA ATCAGAGTATGGAGGAGAATCAGAACTTAAAGGTATGTCAA < 41bp 0.796375716112073 0.591873085047739 0.90508485 0.48928434 prediction 0.409005262128668 Functional Loss - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111857637 chr11:111857640 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_94728 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:111857623-111857647
64251 chrX 48340054 48340054 1 + C T STAD 48340052 + 48340032 48340072 41 TCTGTCAGGGCTATGACCCTCCCGAGGGCTTCATCCCGGAC TCTGTCAGGGCTATGACCCTCCTGAGGGCTTCATCCCGGAC < 41bp 0.873855249694074 0.669355074611289 0.35923177 0.40867585 prediction 0.409000350165569 Functional Loss - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48340052 chrX:48340054 synonymous SNV . 0 23 hm5C_associated_SNPs_94731 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:48340046-48340074
64251 chr1 155292103 155292103 1 + C T BLCA 155292101 + 155292081 155292121 41 TCACCCGATCCTGGCCTGGACTCGAACTGCAACGCCCTGAC TCACCCGATCCTGGCCTGGACTTGAACTGCAACGCCCTGAC < 41bp 0.86427731959786 0.659784117096831 0.5194983 0.15040904 prediction 0.408986405002057 Functional Loss - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155292101 chr1:155292103 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_94734 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:155292103-155292104
64251 chr15 76630210 76630210 1 + G A UCEC 76630207 + 76630187 76630227 41 TCGCCCGACCTCGAGTGGCACGCGGCCTGCCTCAAGTGTGC TCGCCCGACCTCGAGTGGCACGCAGCCTGCCTCAAGTGTGC < 41bp 0.704485804564828 0.453854617336024 0.4143952 0.10179353 prediction 0.408971609129656 Functional Loss - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630207 chr15:76630210 synonymous SNV . 0 24 hm5C_associated_SNPs_94739 0 0 1 RBM15 POSTAR2 ENCODE chr15:76630170-76630228
64251 chr4 52943137 52943137 1 + G A BRCA 52943134 + 52943114 52943154 41 TATTCCCAGGCCCGCCTGGACGCGCAGTGCCTGCTGCGGCG TATTCCCAGGCCCGCCTGGACGCACAGTGCCTGCTGCGGCG < 41bp 0.834637349993177 0.630152723264646 0.54185313 0.24879599 prediction 0.408969253457062 Functional Loss - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52943134 chr4:52943137 synonymous SNV . 0 24 hm5C_associated_SNPs_94740 0 0 1 GRWD1 POSTAR2 ENCODE chr4:52943079-52943249
64251 chr9 109691272 109691272 1 + G A CESC 109691269 + 109691249 109691289 41 GTCCGAGCCCAGCCAGAAGGCAAGAACAACCTCTTCAAGTG GTCCGAGCCCAGCCAGAAGGCAAAAACAACCTCTTCAAGTG < 41bp 0.70448329842709 0.463704859428951 0.2699831 0.21883634 prediction 0.40896659685418 Functional Loss - ZNF462 ENSG00000148143 CDS Human protein_coding chr9:109691269 chr9:109691272 synonymous SNV . 0 24 hm5C_associated_SNPs_94741 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr9:109691264-109691287
64251 chr5 32711877 32711877 1 + G C rs116204726 32711876 + 32711856 32711896 41 CGAGGGCAAGCTCTTTCTTGCGGCACGATGCCGTCTCTGCT CGAGGGCAAGCTCTTTCTTGCCGCACGATGCCGTCTCTGCT < 41bp 0.70447980251571 0.483465923886719 0.899094 0.2985804 prediction 0.408959605031419 Functional Loss - NPR3 ENSG00000113389 UTR5 Human protein_coding chr5:32711876 chr5:32711877 . . 0 22 hm5C_associated_SNPs_94743 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr5:32711860-32711881
64251 chr7 151805305 151805305 1 + C T UCEC 151805302 + 151805282 151805322 41 GCGGAGGGTTCAACTGGGGACTGCACTTCAAATGGGATCTT GCGGAGGGTTCAACTGGGGACTGTACTTCAAATGGGATCTT < 41bp 0.769574284395149 0.565094983596397 0.15939027 0.101071924 prediction 0.408958601597504 Functional Loss - GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805302 chr7:151805305 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94744 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:151805285-151805313
64251 chr9 139972912 139972912 1 + G T BRCA 139972908 + 139972888 139972928 41 GTCCGAGCCCCGTCTGCCTGCAGGGCCAGGCGTACTCGCGG GTCCGAGCCCCGTCTGCCTGCAGGTCCAGGCGTACTCGCGG < 41bp 0.755797298553397 0.55131892304232 0.874426 0.42531452 prediction 0.408956751022154 Functional Loss - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139972908 chr9:139972912 synonymous SNV . 0 25 hm5C_associated_SNPs_94745 0 0 6 SF3A3 POSTAR2 ENCODE chr9:139972857-139972974
64251 chr5 178373452 178373452 1 + G A rs74894989 178373449 + 178373429 178373469 41 CAGAGGGCCCTGTACAGGGACGTGATGCTGGAGAACTACAG CAGAGGGCCCTGTACAGGGACGTAATGCTGGAGAACTACAG < 41bp 0.704476047321177 0.460658050266348 0.17872337 0.17701408 prediction 0.408952094642354 Functional Loss - ZNF454 ENSG00000178187 CDS Human protein_coding chr5:178373449 chr5:178373452 synonymous SNV . 0 24 hm5C_associated_SNPs_94748 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:178373448-178373474
64251 chr22 50636382 50636382 1 + C T STAD 50636379 + 50636359 50636399 41 ACGTCTACCTAACCTACATGCTGCGCCAGGCCGCGCGGCGC ACGTCTACCTAACCTACATGCTGTGCCAGGCCGCGCGGCGC < 41bp 0.737025454729852 0.532554040118024 0.20544949 0.3442743 prediction 0.408942829223657 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636379 chr22:50636382 nonsynonymous SNV 0.790 3 24 hm5C_associated_SNPs_94750 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50636373-50636413
64251 chr15 49170700 49170700 1 + C T rs112644597 49170697 + 49170677 49170717 41 TTTGATGACTGGGAGGACGACTACGACTATCCCGAAGAGGA TTTGATGACTGGGAGGACGACTATGACTATCCCGAAGAGGA < 41bp 0.704464899365245 0.488332282524713 0.3597864 0.2281101 prediction 0.40892979873049 Functional Loss - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170697 chr15:49170700 synonymous SNV . 0 24 hm5C_associated_SNPs_94756 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:49170640-49170716
64251 chr11 114310214 114310214 1 + G A LUAD 114310211 + 114310191 114310231 41 CTATTGCGCCTGCGCCAGCGCCGGCTGCGAGACTGGGGCCG CTATTGCGCCTGCGCCAGCGCCGACTGCGAGACTGGGGCCG < 41bp 0.722806988984471 0.518342368235074 0.85626197 0.2481997 prediction 0.408929241498794 Functional Loss - REXO2 ENSG00000076043 UTR5 Human protein_coding chr11:114310211 chr11:114310214 . . 0 24 hm5C_associated_SNPs_94757 0 0 4 DDX3X POSTAR2 ENCODE chr11:114310202-114310284
64251 chr5 68513659 68513659 1 + G T UCEC 68513656 + 68513636 68513676 41 AACTGCCCCTTCTCGGGGGTCATGATGGGCAGCAAGATGGC AACTGCCCCTTCTCGGGGGTCATTATGGGCAGCAAGATGGC < 41bp 0.704463532035769 0.459295754836981 0.9057288 0.8985252 prediction 0.408927064071539 Functional Loss - MRPS36 ENSG00000134056 CDS Human protein_coding chr5:68513656 chr5:68513659 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_94758 0 0 5 ALKBH5 POSTAR2 GSE38201,GSM936506 chr5:68513656-68513682
64251 chr7 134217814 134217814 1 + C T LGG 134217811 + 134217791 134217831 41 TAATGCCATCGGTGGAAAAGCAACGTTCTTGGATGCCTGGG TAATGCCATCGGTGGAAAAGCAATGTTCTTGGATGCCTGGG < 41bp 0.705254895797526 0.500793513071029 0.35255653 0.34738916 prediction 0.408922765452993 Functional Loss - AKR1B10 ENSG00000198074 CDS Human protein_coding chr7:134217811 chr7:134217814 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_94759 0 0 1 SRSF9 POSTAR2 ENCODE chr7:134217811-134217864
64251 chr4 3317977 3317977 1 + G A LUAD 3317974 + 3317954 3317994 41 GGTGCGGAGTGTGGAGGTTGCCCGGGGGAGGGCCGGCTACG GGTGCGGAGTGTGGAGGTTGCCCAGGGGAGGGCCGGCTACG < 41bp 0.704457096782345 0.468678826205062 0.9101465 0.40926814 prediction 0.408914193564689 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3317974 chr4:3317977 nonsynonymous SNV 0.013 4 24 hm5C_associated_SNPs_94761 0 0 2 EIF3H POSTAR2 ENCODE chr4:3317929-3318089
64251 chr4 3317976 3317976 1 + C T UCEC 3317974 + 3317954 3317994 41 GGTGCGGAGTGTGGAGGTTGCCCGGGGGAGGGCCGGCTACG GGTGCGGAGTGTGGAGGTTGCCTGGGGGAGGGCCGGCTACG < 41bp 0.704457096782345 0.47089533567461 0.9101465 0.9083233 prediction 0.408914193564689 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3317974 chr4:3317976 nonsynonymous SNV 0.012 4 23 hm5C_associated_SNPs_94762 0 0 2 EIF3H POSTAR2 ENCODE chr4:3317929-3318089
64251 chr19 50029575 50029575 1 + C T rs115648877 50029573 + 50029553 50029593 41 TTTCCACCTCGATAATATAACACGAGTTTGGGCCCGAATCA TTTCCACCTCGATAATATAACATGAGTTTGGGCCCGAATCA < 41bp 0.704454793119712 0.459364881427375 0.23297644 0.15820435 prediction 0.408909586239424 Functional Loss - FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50029573 chr19:50029575 . . 0 23 hm5C_associated_SNPs_94763 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50029540-50029576
64251 chr1 248039724 248039724 1 + G A UCEC 248039721 + 248039701 248039741 41 CTTGCCACCCACAACAATAGCAGGGTCAGGAAATTGGGCAT CTTGCCACCCACAACAATAGCAGAGTCAGGAAATTGGGCAT < 41bp 0.820089755465609 0.615643679920573 0.88673365 0.5526925 prediction 0.408892151090071 Functional Loss - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039721 chr1:248039724 nonsynonymous SNV 0.008 0 24 hm5C_associated_SNPs_94767 0 0 3 IGF2BP1 POSTAR2 ENCODE chr1:248039661-248039746
64251 chr8 145749504 145749504 1 + C T LUAD 145749502 + 145749482 145749522 41 AGGAAGAGGTACCTGTGAGGCGCAGGACTTGCAGACTGGCC AGGAAGAGGTACCTGTGAGGCGTAGGACTTGCAGACTGGCC < 41bp 0.717689322826625 0.513248722650612 0.39301634 0.33561718 prediction 0.408881200352026 Functional Loss - LRRC24 ENSG00000254402 CDS Human protein_coding chr8:145749502 chr8:145749504 synonymous SNV . 0 23 hm5C_associated_SNPs_94768 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:145749475-145749505
64251 chr15 90895564 90895564 1 + A C rs1869179 90895563 + 90895543 90895583 41 CGGTCGGGTTCTGGGAGGCACAGCCTCGGGGTTGCGGGCCG CGGTCGGGTTCTGGGAGGCACCGCCTCGGGGTTGCGGGCCG < 41bp 0.771708650033288 0.567270363916008 0.31406653 0.3874101 prediction 0.408876572234559 Functional Loss - ZNF774 ENSG00000196391 UTR5 Human protein_coding chr15:90895563 chr15:90895564 . . 0 22 hm5C_associated_SNPs_94773 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr15:90895564-90895565
64251 chr2 101192906 101192906 1 + C T GBM 101192903 + 101192883 101192923 41 GATTGAAGACGTGTTGCTGTCCTCAGTGCGGCGCTCTGTCC GATTGAAGACGTGTTGCTGTCCTTAGTGCGGCGCTCTGTCC < 41bp 0.738465007944471 0.534037197385954 0.022684932 0.013993174 prediction 0.408855621117035 Functional Loss - PDCL3 ENSG00000115539 CDS Human protein_coding chr2:101192903 chr2:101192906 nonsynonymous SNV 0.222 2 24 hm5C_associated_SNPs_94784 0 0 1 UCHL5 POSTAR2 ENCODE chr2:101192841-101192912
64251 chr11 63978759 63978759 1 + C T rs113348354 63978756 + 63978736 63978776 41 CTGCACTCCAGGCGTGGCACCTGCACTGTTCCGGGGGATGC CTGCACTCCAGGCGTGGCACCTGTACTGTTCCGGGGGATGC < 41bp 0.777423330773341 0.572997063497366 0.18343836 0.18496516 prediction 0.40885253455195 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63978756 chr11:63978759 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_94785 0 0 6 GEMIN5 POSTAR2 ENCODE chr11:63978742-63978787
64251 chr10 60124635 60124635 1 + A T LUSC 60124631 + 60124611 60124651 41 GTCACCAGCTCTGACTGTATCAAAAGGTAATTTCATTGATC GTCACCAGCTCTGACTGTATCAAATGGTAATTTCATTGATC < 41bp 0.704425137707999 0.38756302435696 0.74224865 0.23012823 prediction 0.408850275415997 Functional Loss - UBE2D1 ENSG00000072401 CDS Human protein_coding chr10:60124631 chr10:60124635 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_94787 0 0 1 HNRNPD POSTAR2 GSE52971,GSM1279666 chr10:60124627-60124648
64251 chr15 91491396 91491396 1 + C T UCEC 91491393 + 91491373 91491413 41 TGGCTGTGCAATGACCAGATCGACGCAGGCACTCGGCGCTG TGGCTGTGCAATGACCAGATCGATGCAGGCACTCGGCGCTG < 41bp 0.729789345012959 0.525364479973889 0.3178749 0.1324574 prediction 0.408849730078141 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91491393 chr15:91491396 synonymous SNV . 0 24 hm5C_associated_SNPs_94788 0 0 4 FMR1 POSTAR2 ENCODE chr15:91491371-91491420
64251 chr20 35812762 35812762 1 + G A UCEC 35812759 + 35812739 35812779 41 GACTCAGCAGCCTTGGTGCTCAGGTGCCAGATGCAAAGGTA GACTCAGCAGCCTTGGTGCTCAGATGCCAGATGCAAAGGTA < 41bp 0.813536394734729 0.609115617723757 0.92210424 0.9117744 prediction 0.408841554021945 Functional Loss - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35812759 chr20:35812762 nonsynonymous SNV 0.967 1 24 hm5C_associated_SNPs_94791 0 0 13 FUS POSTAR2 DRA001158,DRS012384 chr20:35812709-35812768
64251 chr8 144462028 144462028 1 + G A SKCM 144462025 + 144462005 144462045 41 GCCGAGTACAGGCTAGTGCACCGGACCATGGCCCAGCCACC GCCGAGTACAGGCTAGTGCACCGAACCATGGCCCAGCCACC < 41bp 0.704416632659978 0.450830243851971 0.42053896 0.14121228 prediction 0.408833265319955 Functional Loss - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144462025 chr8:144462028 synonymous SNV . 0 24 hm5C_associated_SNPs_94797 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:144462020-144462047
64251 chr1 233497919 233497919 1 + G A UCEC 233497916 + 233497896 233497936 41 GCGAGATCGACGTGCTGGAGCGGGAACTTAACATTCTGATA GCGAGATCGACGTGCTGGAGCGGAAACTTAACATTCTGATA < 41bp 0.825041191791122 0.620626949997914 0.16593519 0.065478414 prediction 0.408828483586414 Functional Loss - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233497916 chr1:233497919 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_94798 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:233497898-233497923
64251 chr17 9604512 9604512 1 + C T UCEC 9604509 + 9604489 9604529 41 AGCAGCAGCAGGCGCATCAGCAGCACAGCTGTACCTTGGAT AGCAGCAGCAGGCGCATCAGCAGTACAGCTGTACCTTGGAT < 41bp 0.714191720654008 0.509777601372769 0.3613857 0.17099378 prediction 0.408828238562478 Functional Loss - USP43 ENSG00000154914 CDS Human protein_coding chr17:9604509 chr17:9604512 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_94799 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:9604507-9604528
64251 chr1 38489736 38489736 1 + G A rs372565114 38489733 + 38489713 38489753 41 TTGGCCAGGCTGGTTTTGAACTCGTGGCCTCAAGCGATCCT TTGGCCAGGCTGGTTTTGAACTCATGGCCTCAAGCGATCCT < 41bp 0.807965559098366 0.603553098806377 0.08539283 0.041463166 prediction 0.408824920583978 Functional Loss - UTP11 ENSG00000183520 UTR3 Human protein_coding chr1:38489733 chr1:38489736 . . 0 24 hm5C_associated_SNPs_94801 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:38489525-38489744
64251 chr2 74685760 74685760 1 + G C CESC 74685756 + 74685736 74685776 41 CGGGCCAGCAGCGGGAACGGCAGCGAGGAGGCCTGGGGGGC CGGGCCAGCAGCGGGAACGGCAGCCAGGAGGCCTGGGGGGC < 41bp 0.704409592242897 0.405699880826527 0.91650987 0.7181008 prediction 0.408819184485794 Functional Loss - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74685756 chr2:74685760 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_94803 0 0 7 AARS POSTAR2 ENCODE chr2:74685735-74685792
64251 chr8 144718254 144718254 1 + G C rs1540558 144718250 + 144718230 144718270 41 CGGCTGATCTGTGGGGCCCGCGCCGGCGGGGTCCAGTCAGC CGGCTGATCTGTGGGGCCCGCGCCCGCGGGGTCCAGTCAGC < 41bp 0.856458111293314 0.652051473184434 0.7950837 0.11454424 prediction 0.40881327621776 Functional Loss - ZNF623 ENSG00000183309 UTR5 Human protein_coding chr8:144718250 chr8:144718254 . . 0 25 hm5C_associated_SNPs_94805 0 0 7 DDX3X POSTAR2 ENCODE chr8:144718236-144718302
64251 chrX 134655171 134655171 1 + C T GBM 134655169 + 134655149 134655189 41 CATCCCTTGCCCCGCAGCTGCGCGCCCGGGACCCGGCCAGC CATCCCTTGCCCCGCAGCTGCGTGCCCGGGACCCGGCCAGC < 41bp 0.70440657810657 0.43961639145852 0.21173325 0.19724691 prediction 0.408813156213139 Functional Loss - INTS6L ENSG00000165359 CDS Human protein_coding chrX:134655169 chrX:134655171 synonymous SNV . 0 23 hm5C_associated_SNPs_94806 0 0 2 YBX3 POSTAR2 ENCODE chrX:134655163-134655218
64251 chr3 38010964 38010964 1 + G A rs182070256 38010961 + 38010941 38010981 41 GGCCTATTCTTGGTTACTTGCACGGGGACGCGGGCCTGGAC GGCCTATTCTTGGTTACTTGCACAGGGACGCGGGCCTGGAC < 41bp 0.781414667773924 0.577008244398142 0.8615806 0.4253313 prediction 0.408812846751565 Functional Loss - MIR26A1 ENSG00000199075 ncRNA_exonic Human miRNA chr3:38010961 chr3:38010964 . . 0 24 hm5C_associated_SNPs_94807 0 0 6 DGCR8 POSTAR2 GSE39086,GSM955512 chr3:38010960-38010980
64251 chr7 97911700 97911700 1 + C T rs112773459 97911698 + 97911678 97911718 41 ATCCCAGGGTCTACAACATCCACAGCCGGACCGTCACCCGC ATCCCAGGGTCTACAACATCCATAGCCGGACCGTCACCCGC < 41bp 0.704404802643668 0.43134577407755 0.1458573 0.20060208 prediction 0.408809605287337 Functional Loss - BRI3 ENSG00000164713 CDS Human protein_coding chr7:97911698 chr7:97911700 synonymous SNV . 0 23 hm5C_associated_SNPs_94808 0 0 21 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:97911664-97911702
64251 chr8 42183575 42183575 1 + T C LIHC 42183574 + 42183554 42183594 41 GGGCAGCTGATGTCTCAGCCCTCCACGGCCTCCAACAGCTT GGGCAGCTGATGTCTCAGCCCCCCACGGCCTCCAACAGCTT < 41bp 0.704398703873956 0.421128632013739 0.9032068 0.017089069 prediction 0.408797407747912 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42183574 chr8:42183575 nonsynonymous SNV 0.104 0 22 hm5C_associated_SNPs_94812 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:42183548-42183586
64251 chr4 1245119 1245119 1 + G A rs544486352 1245116 + 1245096 1245136 41 GTGCCCAGCCGTGTGCACAGCTCGTCCCAACTCCTGCGGGT GTGCCCAGCCGTGTGCACAGCTCATCCCAACTCCTGCGGGT < 41bp 0.704392011483218 0.451622221527777 0.31174204 0.2891233 prediction 0.408784022966436 Functional Loss - CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1245116 chr4:1245119 . . 0 24 hm5C_associated_SNPs_94819 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:1245098-1245130
64251 chrX 150575105 150575105 1 + G A rs761081873 150575102 + 150575082 150575122 41 ACCTCAGGTGATCCACCCGCCTCGGCCTCCGAAAGTGCTGG ACCTCAGGTGATCCACCCGCCTCAGCCTCCGAAAGTGCTGG < 41bp 0.811054696561061 0.606664100074436 0.13578212 0.15176338 prediction 0.40878119297325 Functional Loss - VMA21 ENSG00000160131 UTR3 Human protein_coding chrX:150575102 chrX:150575105 . . 0 24 hm5C_associated_SNPs_94822 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:150575034-150575116
64251 chr3 158531839 158531839 1 + G T LUSC 158531837 + 158531817 158531857 41 TCTGCTGGTCACACAACCCTCGGGATCACACTTATGATTGG TCTGCTGGTCACACAACCCTCGTGATCACACTTATGATTGG < 41bp 0.915767140548433 0.711383608162372 0.8609834 0.28444397 prediction 0.408767064772121 Functional Loss - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158531837 chr3:158531839 nonsynonymous SNV 0.968 4 23 hm5C_associated_SNPs_94828 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:158531830-158531852
64251 chr22 39884731 39884731 1 + G T LUAD 39884729 + 39884709 39884749 41 AACTACATCCGCGGCCTGATCCGCACCGGGGGCTGGTTCGA AACTACATCCGCGGCCTGATCCTCACCGGGGGCTGGTTCGA < 41bp 0.704381839128665 0.354290272138708 0.20379645 0.05777487 prediction 0.408763678257331 Functional Loss - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39884729 chr22:39884731 nonsynonymous SNV 0.982 4 23 hm5C_associated_SNPs_94830 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:39884731-39884732
64251 chr1 110170415 110170415 1 + C T CESC 110170412 + 110170392 110170432 41 CCAGAAAGTCATTCTGCTACCGCCGGCTGCAGTACCTGAGC CCAGAAAGTCATTCTGCTACCGCTGGCTGCAGTACCTGAGC < 41bp 0.7305819674682 0.526201512240764 0.6864137 0.29635224 prediction 0.408760910454872 Functional Loss - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110170412 chr1:110170415 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_94832 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110170395-110170433
64251 chr22 29885870 29885870 1 + A T rs546363585 29885868 + 29885848 29885888 41 TGAAGGAAGAAGCTAAGTCCCCAGAGAAGGCCAAGTCCCCA TGAAGGAAGAAGCTAAGTCCCCTGAGAAGGCCAAGTCCCCA < 41bp 0.75220743303195 0.54782800988794 0.61797756 0.093396395 prediction 0.40875884628802 Functional Loss - NEFH ENSG00000100285 CDS Human protein_coding chr22:29885868 chr22:29885870 synonymous SNV . 0 23 hm5C_associated_SNPs_94834 0 0 1 UCHL5 POSTAR2 ENCODE chr22:29885866-29885984
64251 chr3 127323918 127323918 1 + C T UCEC 127323915 + 127323895 127323935 41 GCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTCCTG GCCCCCGGCTGGAGATCCACCACTGCTTCAAGAACTTCCTG < 41bp 0.704378651927681 0.493390438797127 0.24256584 0.08641952 prediction 0.408757303855363 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323915 chr3:127323918 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94835 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067862 chr3:127323908-127323957
64251 chr22 46704834 46704834 1 + G T LIHC 46704830 + 46704810 46704850 41 AGGAAGAAGCATCCCTGGGGCTGCGGAGAAGGTAAATGCCA AGGAAGAAGCATCCCTGGGGCTGCTGAGAAGGTAAATGCCA < 41bp 0.726661780420526 0.52228342836994 0.21429935 0.24935183 prediction 0.408756704101172 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46704830 chr22:46704834 synonymous SNV . 0 25 hm5C_associated_SNPs_94836 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:46704807-46704837
64251 chr12 8866624 8866624 1 + G A SKCM 8866621 + 8866601 8866641 41 GATGAGGTGGTGCTGACAATCGAGCAAGGAAACCTGGGTAA GATGAGGTGGTGCTGACAATCGAACAAGGAAACCTGGGTAA < 41bp 0.812922987737571 0.608549088862415 0.8731307 0.55449975 prediction 0.408747797750311 Functional Loss - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8866621 chr12:8866624 synonymous SNV . 0 24 hm5C_associated_SNPs_94841 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr12:8866513-8866628
64251 chr3 105264155 105264155 1 + G A LUSC 105264152 + 105264132 105264172 41 TCATGCACAATATCTGCTAGCAGGAATGCAACTGTGGTATG TCATGCACAATATCTGCTAGCAGAAATGCAACTGTGGTATG < 41bp 0.793395461309009 0.58902445789166 0.7397848 0.8428334 prediction 0.408742006834697 Functional Loss - ALCAM ENSG00000170017 CDS Human protein_coding chr3:105264152 chr3:105264155 synonymous SNV . 0 24 hm5C_associated_SNPs_94843 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:105264118-105264156
64251 chr2 219294156 219294156 1 + C T SKCM 219294153 + 219294133 219294173 41 CAAGCGCAGGGAGCTGAAGGCGGCCGTGCCCGACACGGTGG CAAGCGCAGGGAGCTGAAGGCGGTCGTGCCCGACACGGTGG < 41bp 0.740119335085171 0.535752470764881 0.89986193 0.87831223 prediction 0.408733728640581 Functional Loss - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219294153 chr2:219294156 nonsynonymous SNV 0.030 2 24 hm5C_associated_SNPs_94845 0 0 5 GRWD1 POSTAR2 ENCODE chr2:219294065-219294187
64251 chr4 1729555 1729555 1 + C T UCEC 1729552 + 1729532 1729572 41 GCCTTTGGGAGTGGCAGCTCCAGCGAGTCTGGCCCAGGTGC GCCTTTGGGAGTGGCAGCTCCAGTGAGTCTGGCCCAGGTGC < 41bp 0.716325357260489 0.511963152722467 0.9112736 0.87437046 prediction 0.408724409076044 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729552 chr4:1729555 synonymous SNV . 0 24 hm5C_associated_SNPs_94849 0 0 6 EIF3D POSTAR2 ENCODE chr4:1729504-1729581
64251 chr17 37356561 37356561 1 + G A rs114881037 37356558 + 37356538 37356578 41 AGATAATGGGAGGAGCCGGGCCCGAGCGAGCTCTTTCCTTT AGATAATGGGAGGAGCCGGGCCCAAGCGAGCTCTTTCCTTT < 41bp 0.792957459601443 0.588596134343772 0.19598266 0.15736622 prediction 0.408722650515342 Functional Loss - RPL19 ENSG00000108298 UTR5 Human protein_coding chr17:37356558 chr17:37356561 . . 0 24 hm5C_associated_SNPs_94850 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:37356560-37356580
64251 chr14 73570036 73570036 1 + G C KIRC 73570035 + 73570015 73570055 41 AAAGGGAAAGAGAACGTGAACGAGAAAAGGAGAAAGAACGG AAAGGGAAAGAGAACGTGAACCAGAAAAGGAGAAAGAACGG < 41bp 0.891636447985813 0.687276331086456 0.88455856 0.88116217 prediction 0.408720233798714 Functional Loss - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73570035 chr14:73570036 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_94851 0 0 19 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr14:73570020-73570040
64251 chr10 7839114 7839114 1 + G T BRCA 7839112 + 7839092 7839132 41 AGCTGAGAGAGAGCTGAAACCAGCTCGAATATATGGATTGG AGCTGAGAGAGAGCTGAAACCATCTCGAATATATGGATTGG < 41bp 0.704359831739559 0.367674056559812 0.2980771 0.07207841 prediction 0.408719663479118 Functional Loss - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7839112 chr10:7839114 nonsynonymous SNV 0.575 2 23 hm5C_associated_SNPs_94852 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:7839062-7839119
64251 chr22 39117783 39117783 1 + G T UCEC 39117779 + 39117759 39117799 41 GCTGGCATCGTGGGGATGACCAAAGAACACCTGGGCTTGGC GCTGGCATCGTGGGGATGACCAAATAACACCTGGGCTTGGC < 41bp 0.710019936152963 0.505661113304052 0.1448906 0.15633005 prediction 0.408717645697821 Functional Loss - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39117779 chr22:39117783 stopgain 0.995 1 25 hm5C_associated_SNPs_94853 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:39117755-39117812
64251 chr17 40837073 40837073 1 + C T COAD 40837070 + 40837050 40837090 41 TGACCTGCACTTCCACTTCACTGCGCGCTACATCCGCATCG TGACCTGCACTTCCACTTCACTGTGCGCTACATCCGCATCG < 41bp 0.704358100466985 0.486816809059322 0.13614905 0.13293526 prediction 0.40871620093397 Functional Loss - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40837070 chr17:40837073 nonsynonymous SNV 0.758 5 24 hm5C_associated_SNPs_94854 0 0 1 GRWD1 POSTAR2 ENCODE chr17:40837072-40837126
64251 chr12 54677742 54677742 1 + C T CESC 54677740 + 54677720 54677760 41 AGGCCAATACTTTGCAAAACCACGAAACCAAGGTATGGTAT AGGCCAATACTTTGCAAAACCATGAAACCAAGGTATGGTAT < 41bp 0.873415437994506 0.669057662948682 0.106684834 0.12265256 prediction 0.408715550091649 Functional Loss - HNRNPA1 ENSG00000135486 CDS Human protein_coding chr12:54677740 chr12:54677742 stopgain 0.998 0 23 hm5C_associated_SNPs_94855 1 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr12:54677724-54677745
64251 chr12 120118337 120118337 1 + C T rs149235507 120118334 + 120118314 120118354 41 TGTGACAGTCCTCCTAGCACCCCCATGGCTTTGAGCCTCGG TGTGACAGTCCTCCTAGCACCCCTATGGCTTTGAGCCTCGG < 41bp 0.705989571710247 0.501633353150933 0.045408666 0.033429444 prediction 0.408712437118628 Functional Loss - PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120118334 chr12:120118337 . . 0 24 hm5C_associated_SNPs_94856 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:120118305-120118340
64251 chr21 45744529 45744529 1 + C T rs199655624 45744527 + 45744507 45744547 41 TCGAGGACCCTTTCAACATCCACGACTTAAAGGTGAGCCCA TCGAGGACCCTTTCAACATCCATGACTTAAAGGTGAGCCCA < 41bp 0.860553184083058 0.656197645271472 0.12384161 0.1722942 prediction 0.408711077623173 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45744527 chr21:45744529 synonymous SNV . 0 23 hm5C_associated_SNPs_94857 0 0 2 DDX24 POSTAR2 ENCODE chr21:45744494-45744534
64251 chr2 136396514 136396514 1 + C T ESCA 136396511 + 136396491 136396531 41 TCTACAAATAGCCATCAAAGCAGCACTGAGAATGAGTTGAA TCTACAAATAGCCATCAAAGCAGTACTGAGAATGAGTTGAA < 41bp 0.704346502320822 0.475664287405087 0.3500937 0.37640932 prediction 0.408693004641643 Functional Loss - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136396511 chr2:136396514 synonymous SNV . 0 24 hm5C_associated_SNPs_94868 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:136396496-136396517
64251 chrX 48663851 48663851 1 + G T LUAD 48663849 + 48663829 48663869 41 GACTCCATCTCCCCAGCTTCCCGGAAGGCCCTGAGCGGCTC GACTCCATCTCCCCAGCTTCCCTGAAGGCCCTGAGCGGCTC < 41bp 0.704344407194743 0.36410297559984 0.42054167 0.09666002 prediction 0.408688814389487 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48663849 chrX:48663851 synonymous SNV . 0 23 hm5C_associated_SNPs_94870 0 0 9 BUD13 POSTAR2 ENCODE chrX:48663844-48663865
64251 chr5 179263448 179263448 1 + G A COAD 179263445 + 179263425 179263465 41 TGTTTCGGCAGAGGCTGACCCGCGGCTGATTGAGTCCCTCT TGTTTCGGCAGAGGCTGACCCGCAGCTGATTGAGTCCCTCT < 41bp 0.816301314739697 0.61196258643789 0.8625916 0.29945987 prediction 0.408677456603614 Functional Loss - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179263445 chr5:179263448 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_94875 0 0 6 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179263440-179263460
64251 chr6 109764087 109764087 1 + G T COAD 109764084 + 109764064 109764104 41 TATCTTGAAACTCGGGACTTCAAGGTGAGGACTTGCCTGTT TATCTTGAAACTCGGGACTTCAATGTGAGGACTTGCCTGTT < 41bp 0.704336523740468 0.301367580181372 0.91230065 0.1977329 prediction 0.408673047480935 Functional Loss - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764084 chr6:109764087 nonsynonymous SNV 0.853 1 24 hm5C_associated_SNPs_94877 0 0 2 PRPF8 POSTAR2 ENCODE chr6:109764076-109764122
64251 chr10 70446129 70446129 1 + G A DLBC 70446126 + 70446106 70446146 41 CTATCAGGTTTGTACCTTAACTCGAGAAGATAACCGCTCTT CTATCAGGTTTGTACCTTAACTCAAGAAGATAACCGCTCTT < 41bp 0.704334492688422 0.46908384818209 0.17853981 0.14967853 prediction 0.408668985376845 Functional Loss - TET1 ENSG00000138336 CDS Human protein_coding chr10:70446126 chr10:70446129 nonsynonymous SNV 0.913 1 24 hm5C_associated_SNPs_94881 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr10:70446117-70446141
64251 chr4 109543139 109543139 1 + A T PAAD 109543137 + 109543117 109543157 41 TGGTCCAGCGTTTGACATACCGACGTAGGCTTTCCTACAAT TGGTCCAGCGTTTGACATACCGTCGTAGGCTTTCCTACAAT < 41bp 0.728354492330666 0.52402891023278 0.17717451 0.11240518 prediction 0.408651164195772 Functional Loss - RPL34 ENSG00000109475 CDS Human protein_coding chr4:109543137 chr4:109543139 synonymous SNV . 0 23 hm5C_associated_SNPs_94887 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:109543100-109543140
64251 chr3 132396379 132396379 1 + C T rs77695809 132396377 + 132396357 132396397 41 TTGATATAAATTAGTTTTCTCTCGAGTTACACCCAAGTAAT TTGATATAAATTAGTTTTCTCTTGAGTTACACCCAAGTAAT < 41bp 0.796941669837546 0.592616512147196 0.33187294 0.073874235 prediction 0.4086503153807 Functional Loss - NPHP3-ACAD11 ENSG00000081307 UTR3 Human protein_coding chr3:132396377 chr3:132396379 . . 0 23 hm5C_associated_SNPs_94888 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr3:132396355-132396405
64251 chr2 3391570 3391570 1 + C T COAD 3391568 + 3391548 3391588 41 TCGGAAGGCTCGAGTCCTCTCGCGGACAAGCTGAACGAACA TCGGAAGGCTCGAGTCCTCTCGTGGACAAGCTGAACGAACA < 41bp 0.851900102542726 0.647576290414304 0.88093513 0.88516235 prediction 0.408647624256843 Functional Loss - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3391568 chr2:3391570 nonsynonymous SNV 0.005 0 23 hm5C_associated_SNPs_94889 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:3391547-3391623
64251 chr13 20235878 20235878 1 + G A MESO 20235875 + 20235855 20235895 41 ACTGGTGATGCTTGCCGCCGCCGGAGGGCAGGACGACCTCC ACTGGTGATGCTTGCCGCCGCCGAAGGGCAGGACGACCTCC < 41bp 0.823359333298794 0.619040021815886 0.8315761 0.3539925 prediction 0.408638622965815 Functional Loss - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20235875 chr13:20235878 nonsynonymous SNV 0.270 4 24 hm5C_associated_SNPs_94892 0 0 3 BUD13 POSTAR2 ENCODE chr13:20235789-20235942
64251 chr2 27826165 27826165 1 + G T UCEC 27826161 + 27826141 27826181 41 ACTTGCATATCACCTGAGGTCAGAGCATGGGCCTGTGAGTA ACTTGCATATCACCTGAGGTCAGATCATGGGCCTGTGAGTA < 41bp 0.721236558114658 0.516918137206795 0.24868289 0.14176005 prediction 0.408636841815726 Functional Loss - ZNF512 ENSG00000243943 CDS Human protein_coding chr2:27826161 chr2:27826165 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_94893 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:27826126-27826175
64251 chr17 36909435 36909435 1 + G T LUSC 36909432 + 36909412 36909452 41 TCCTATAACGGAGGGGCCGTCATGGCCATGAAGGGGAAGAA TCCTATAACGGAGGGGCCGTCATTGCCATGAAGGGGAAGAA < 41bp 0.704307448988726 0.30841601925573 0.392941 0.1715937 prediction 0.408614897977451 Functional Loss - PSMB3 ENSG00000108294 CDS Human other chr17:36909432 chr17:36909435 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_94899 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:36909400-36909460
64251 chr12 64823890 64823890 1 + G A COAD 64823887 + 64823867 64823907 41 ACTTTTTATTTATGAGACAGCTGGAGTGCTGATTGTTAATA ACTTTTTATTTATGAGACAGCTGAAGTGCTGATTGTTAATA < 41bp 0.784204964939914 0.57989991139662 0.12320122 0.07788283 prediction 0.408610107086587 Functional Loss - XPOT ENSG00000184575 CDS Human protein_coding chr12:64823887 chr12:64823890 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_94902 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:64823877-64823908
64251 chr9 140109371 140109371 1 + C T SKCM 140109369 + 140109349 140109389 41 AACTCCTGGCCTGTCTATCCCTCCATGAGCTGGAGCGGGAG AACTCCTGGCCTGTCTATCCCTTCATGAGCTGGAGCGGGAG < 41bp 0.704300390116457 0.40628352945021 0.97349834 0.13895631 prediction 0.408600780232913 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140109369 chr9:140109371 synonymous SNV . 0 23 hm5C_associated_SNPs_94907 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr9:140109340-140109380
64251 chr9 140109372 140109372 1 + C T SKCM 140109369 + 140109349 140109389 41 AACTCCTGGCCTGTCTATCCCTCCATGAGCTGGAGCGGGAG AACTCCTGGCCTGTCTATCCCTCTATGAGCTGGAGCGGGAG < 41bp 0.704300390116457 0.470702580965061 0.97349834 0.9511694 prediction 0.408600780232913 Functional Loss - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140109369 chr9:140109372 nonsynonymous SNV 0.571 2 24 hm5C_associated_SNPs_94908 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr9:140109340-140109380
64251 chr19 52196779 52196779 1 + G A UCEC 52196776 + 52196756 52196796 41 TCCCCTGGCCTTGAGACCCACACGATGGCCCTGCTGGCTCT TCCCCTGGCCTTGAGACCCACACAATGGCCCTGCTGGCTCT < 41bp 0.704300160664767 0.465154857631589 0.32781604 0.10783893 prediction 0.408600321329534 Functional Loss - SPACA6 ENSG00000182310;ENSG00000273318 ncRNA_exonic Human other chr19:52196776 chr19:52196779 . . 0 24 hm5C_associated_SNPs_94909 0 0 4 DGCR8 POSTAR2 ENCODE chr19:52196738-52196804
64251 chr4 187192828 187192828 1 + C T LUSC 187192826 + 187192806 187192846 41 GGACATTACTACGGTCTTCACACCAAGCGCCAAGTACTGCC GGACATTACTACGGTCTTCACATCAAGCGCCAAGTACTGCC < 41bp 0.880083075153845 0.675790351551679 0.216151 0.23654774 prediction 0.408585447204331 Functional Loss - F11 ENSG00000088926 CDS Human protein_coding chr4:187192826 chr4:187192828 nonsynonymous SNV 0.013 5 23 hm5C_associated_SNPs_94917 0 0 1 GRWD1 POSTAR2 ENCODE chr4:187192769-187192834
64251 chr15 78454661 78454661 1 + G T LUSC 78454658 + 78454638 78454678 41 TGAGTTTGCCTTTGAGTATGCCCGGAACAACCACCGGAGCA TGAGTTTGCCTTTGAGTATGCCCTGAACAACCACCGGAGCA < 41bp 0.704286703377995 0.310926011901901 0.24317813 0.12979388 prediction 0.40857340675599 Functional Loss - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78454658 chr15:78454661 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_94920 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:78454633-78454663
64251 chr19 35422831 35422831 1 + G T LUSC 35422828 + 35422808 35422848 41 CCCAGCAGGAGTGGGAGAGTCTGGACTCTTCCCAGAGGGGC CCCAGCAGGAGTGGGAGAGTCTGTACTCTTCCCAGAGGGGC < 41bp 0.909334476384108 0.705049106437413 0.61951274 0.15098271 prediction 0.408570739893388 Functional Loss - ZNF30 ENSG00000168661 CDS Human protein_coding chr19:35422828 chr19:35422831 nonsynonymous SNV 0.772 2 24 hm5C_associated_SNPs_94921 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35422831-35422856
64251 chr3 44449093 44449093 1 + C T STAD 44449090 + 44449070 44449110 41 TACCTACATGGGATGCACCTCTGCATTTCACATTTTTACTC TACCTACATGGGATGCACCTCTGTATTTCACATTTTTACTC < 41bp 0.771229107967735 0.566945919633079 0.29203284 0.24526972 prediction 0.408566376669312 Functional Loss - TCAIM ENSG00000179152 CDS Human protein_coding chr3:44449090 chr3:44449093 synonymous SNV . 0 24 hm5C_associated_SNPs_94924 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:44449084-44449112
64251 chr9 131262420 131262420 1 + C T TGCT 131262417 + 131262397 131262437 41 CAGTCCGAGAGCACCAACCGCAGCATGCAGAACTACGTCCA CAGTCCGAGAGCACCAACCGCAGTATGCAGAACTACGTCCA < 41bp 0.722647679600028 0.518366933356847 0.41623616 0.60047907 prediction 0.408561492486362 Functional Loss - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262417 chr9:131262420 synonymous SNV . 0 24 hm5C_associated_SNPs_94927 0 0 1 DGCR8 POSTAR2 ENCODE chr9:131262390-131262421
64251 chr16 81064580 81064580 1 + G A rs555817913 81064577 + 81064557 81064597 41 GGCAGGAGAATCGCTTGAACCCGGGAGACATAGGTTGCAGT GGCAGGAGAATCGCTTGAACCCGAGAGACATAGGTTGCAGT < 41bp 0.71911614945926 0.514844651296541 0.9257369 0.7856759 prediction 0.408542996325438 Functional Loss - CENPN ENSG00000261061 ncRNA_exonic Human sense_intronic chr16:81064577 chr16:81064580 . . 0 24 hm5C_associated_SNPs_94934 0 0 2 TARBP2 POSTAR2 GSE49648,GSM1204357 chr16:81064560-81064580
64251 chr1 219384841 219384841 1 + A C HNSC 219384840 + 219384820 219384860 41 ATCTTCTTCTCTAGGCTCTTCAGAAGAGTAATGGTGTACTT ATCTTCTTCTCTAGGCTCTTCCGAAGAGTAATGGTGTACTT < 41bp 0.704269392445792 0.454162475964467 0.6220717 0.31759876 prediction 0.408538784891585 Functional Loss - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219384840 chr1:219384841 nonsynonymous SNV 0.917 1 22 hm5C_associated_SNPs_94937 0 0 2 LIN28B POSTAR2 ENCODE chr1:219384833-219384857
64251 chr8 56792504 56792504 1 + A C rs563946658 56792503 + 56792483 56792523 41 GGCAAGCGGGGCGGCCGCGCCACCCCCGGCCCCGCGCCAGC GGCAAGCGGGGCGGCCGCGCCCCCCCCGGCCCCGCGCCAGC < 41bp 0.704268856846358 0.496457073504189 0.3955109 0.23866725 prediction 0.408537713692717 Functional Loss - LYN ENSG00000254087 UTR5 Human protein_coding chr8:56792503 chr8:56792504 . . 0 22 hm5C_associated_SNPs_94939 0 0 1 DDX3X POSTAR2 ENCODE chr8:56792396-56792562
64251 chr20 55033542 55033542 1 + G A COAD 55033539 + 55033519 55033559 41 AGCCTCAGCAGCAGCCAGCCCGCGGAGATCATCACTCAGAG AGCCTCAGCAGCAGCCAGCCCGCAGAGATCATCACTCAGAG < 41bp 0.825036898716988 0.62076985817421 0.39736134 0.24585685 prediction 0.408534081085556 Functional Loss - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55033539 chr20:55033542 synonymous SNV . 0 24 hm5C_associated_SNPs_94943 0 0 1 RBM15 POSTAR2 ENCODE chr20:55033486-55033545
64251 chr19 11548910 11548910 1 + G A STAD 11548907 + 11548887 11548927 41 GACTGCTGCGATGGAACAGACGAGTACAACAGCGGCGTCAT GACTGCTGCGATGGAACAGACGAATACAACAGCGGCGTCAT < 41bp 0.704255845582392 0.453772203634226 0.3806082 0.18921477 prediction 0.408511691164785 Functional Loss - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548907 chr19:11548910 synonymous SNV . 0 24 hm5C_associated_SNPs_94958 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:11548896-11548924
64251 chr14 96997831 96997831 1 + G T UCEC 96997828 + 96997808 96997848 41 TCAGATTGATATTTTGTTTGCAAGATTAGCACTGCAGACAA TCAGATTGATATTTTGTTTGCAATATTAGCACTGCAGACAA < 41bp 0.704249355945681 0.336589171437339 0.37065148 0.17519915 prediction 0.408498711891362 Functional Loss - PAPOLA ENSG00000090060 CDS Human protein_coding chr14:96997828 chr14:96997831 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94961 0 0 34 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:96997831-96997862
64251 chr19 46145154 46145154 1 + G C rs549506794 46145150 + 46145130 46145170 41 CCACGAGGTCTTGGAAGAGGCTGGGGGTCCCGGCCTTGTGC CCACGAGGTCTTGGAAGAGGCTGGCGGTCCCGGCCTTGTGC < 41bp 0.758357293057851 0.55411345624572 0.91196775 0.86265683 prediction 0.408487673624262 Functional Loss - EML2-AS1 ENSG00000267757 UTR5 Human processed_transcript chr19:46145150 chr19:46145154 . . 0 25 hm5C_associated_SNPs_94964 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:46145144-46145173
64251 chr6 131158152 131158152 1 + A C rs144310945 131158148 + 131158128 131158168 41 CCAGAAATGCTCCCACAACCCTCAATGGTCTCACTACAACA CCAGAAATGCTCCCACAACCCTCACTGGTCTCACTACAACA < 41bp 0.704237193276406 0.377105256684367 0.4570269 0.020944118 prediction 0.408474386552811 Functional Loss - SMLR1 ENSG00000256162 UTR3 Human protein_coding chr6:131158148 chr6:131158152 . . 0 25 hm5C_associated_SNPs_94970 0 0 1 IGF2BP1 POSTAR2 ENCODE chr6:131158109-131158168
64251 chr1 100752731 100752731 1 + C T UCEC 100752729 + 100752709 100752749 41 GTTACACTCCATACGCAAACCGCGATACATTTTGCTGAACA GTTACACTCCATACGCAAACCGTGATACATTTTGCTGAACA < 41bp 0.870116643073692 0.665881914147984 0.26525342 0.115047574 prediction 0.408469457851416 Functional Loss - RTCA ENSG00000137996 CDS Human protein_coding chr1:100752729 chr1:100752731 nonsynonymous SNV 0.883 3 23 hm5C_associated_SNPs_94972 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:100752691-100752744
64251 chr19 39871357 39871357 1 + T C UCEC 39871356 + 39871336 39871376 41 CGGATGGGCCTCCTGAGCCCCTCGGGCATTGGGGGTGTCTC CGGATGGGCCTCCTGAGCCCCCCGGGCATTGGGGGTGTCTC < 41bp 0.825496512040327 0.621268793359489 0.2949893 0.40512443 prediction 0.408455437361677 Functional Loss - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39871356 chr19:39871357 nonsynonymous SNV 0.800 1 22 hm5C_associated_SNPs_94981 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39871339-39871362
64251 chr11 372902 372902 1 + C T SKCM 372899 + 372879 372919 41 TTTGAGGACTGGTGTGGGGGCGCCGTGGGCCACCTGAGGAG TTTGAGGACTGGTGTGGGGGCGCTGTGGGCCACCTGAGGAG < 41bp 0.750076271587268 0.545850026406833 0.73418194 0.5482049 prediction 0.408452490360871 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:372899 chr11:372902 synonymous SNV . 0 24 hm5C_associated_SNPs_94983 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:372875-372914
64251 chr15 77750761 77750761 1 + G A BLCA 77750758 + 77750738 77750778 41 CCTTTCAGAGAGATGGAAAACTTGATGACTAGCTCCACCCT CCTTTCAGAGAGATGGAAAACTTAATGACTAGCTCCACCCT < 41bp 0.788460161696298 0.584237835192617 0.34310168 0.39832222 prediction 0.408444653007361 Functional Loss - HMG20A ENSG00000140382 CDS Human protein_coding chr15:77750758 chr15:77750761 synonymous SNV . 0 24 hm5C_associated_SNPs_94989 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr15:77750745-77750766
64251 chr4 40154465 40154465 1 + G A rs113404449 40154462 + 40154442 40154482 41 CGGGGAGAGGAAACCACAGCCAGGGAGGAGTTGCTCGCATC CGGGGAGAGGAAACCACAGCCAGAGAGGAGTTGCTCGCATC < 41bp 0.776000306581842 0.5717811173644 0.9229566 0.8975816 prediction 0.408438378434886 Functional Loss - N4BP2 ENSG00000078177 CDS Human protein_coding chr4:40154462 chr4:40154465 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_94991 0 0 8 BUD13 POSTAR2 ENCODE chr4:40154388-40154545
64251 chr10 26998684 26998684 1 + C T BLCA 26998681 + 26998661 26998701 41 TGGCCCGAGCATGCAATATTCATCATAACAACTCCCGGTGA TGGCCCGAGCATGCAATATTCATTATAACAACTCCCGGTGA < 41bp 0.744119662802461 0.539904099833056 0.07585642 0.11797184 prediction 0.408431125938811 Functional Loss - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26998681 chr10:26998684 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_94994 0 0 7 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:26998673-26998697
64251 chr19 8464794 8464794 1 + C T STAD 8464792 + 8464772 8464812 41 GGGCAAGAGCAACCTGCTGTCGCGCTTCACCCGCAACGAGT GGGCAAGAGCAACCTGCTGTCGTGCTTCACCCGCAACGAGT < 41bp 0.841183528314857 0.636968141961853 0.4515135 0.53135306 prediction 0.408430772706009 Functional Loss - RAB11B ENSG00000185236 CDS Human protein_coding chr19:8464792 chr19:8464794 nonsynonymous SNV 0.927 5 23 hm5C_associated_SNPs_94995 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:8464783-8464829
64251 chr10 127436147 127436147 1 + C T UCEC 127436145 + 127436125 127436165 41 AGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTG AGCGCTAAGGTCATTGGGAACATGAGACATACACCCAGCTG < 41bp 0.86450427092153 0.660291973081301 0.4984829 0.4391842 prediction 0.408424595680459 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127436145 chr10:127436147 stopgain 0.998 1 23 hm5C_associated_SNPs_94996 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:127436107-127436164
64251 chr7 1097394 1097394 1 + T C rs11767527 1097393 + 1097373 1097413 41 GGTGCTCAGCGCCCTGGCCCCTGTGCACCTGCTCGGCCCCC GGTGCTCAGCGCCCTGGCCCCCGTGCACCTGCTCGGCCCCC < 41bp 0.767905636406738 0.563695426025922 0.1968832 0.29410386 prediction 0.408420420761632 Functional Loss - GPR146 ENSG00000164849 CDS Human protein_coding chr7:1097393 chr7:1097394 synonymous SNV . 0 22 hm5C_associated_SNPs_95000 0 0 1 DDX3X POSTAR2 ENCODE chr7:1097355-1097400
64251 chr20 25428659 25428659 1 + C T rs189246208 25428657 + 25428637 25428677 41 CATGCCTGTAGTCACAGTTACACGGCAGGCTGAGGTGGGAG CATGCCTGTAGTCACAGTTACATGGCAGGCTGAGGTGGGAG < 41bp 0.786087799303265 0.581881189042498 0.21043813 0.3151629 prediction 0.408413220521534 Functional Loss - GINS1 ENSG00000101003 UTR3 Human protein_coding chr20:25428657 chr20:25428659 . . 0 23 hm5C_associated_SNPs_95001 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:25428653-25428673
64251 chr19 1300017 1300017 1 + C T rs546588217 1300015 + 1299995 1300035 41 CCTGACCTCGGCCCTCCGGACCCGGCTGCGGCCCCCGCCTC CCTGACCTCGGCCCTCCGGACCTGGCTGCGGCCCCCGCCTC < 41bp 0.704204662295 0.490955792842147 0.4106249 0.3893103 prediction 0.408409324590001 Functional Loss - EFNA2 ENSG00000099617 UTR3 Human protein_coding chr19:1300015 chr19:1300017 . . 0 23 hm5C_associated_SNPs_95004 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1299991-1300022
64251 chr2 135208271 135208271 1 + G A rs78170588 135208268 + 135208248 135208288 41 CTCTGCCCTGAGCATCATCACAGGGGCGCCTCCAGACCTGG CTCTGCCCTGAGCATCATCACAGAGGCGCCTCCAGACCTGG < 41bp 0.824678815584642 0.620475170766726 0.9248685 0.88553655 prediction 0.408407289635833 Functional Loss - MGAT5 ENSG00000152127 UTR3 Human protein_coding chr2:135208268 chr2:135208271 . . 0 24 hm5C_associated_SNPs_95005 0 1 1 YBX3 POSTAR2 ENCODE chr2:135208236-135208300
64251 chr5 140475340 140475340 1 + G T LUAD 140475338 + 140475318 140475358 41 AGACATACACAGTAAATATTCAGGCGACAGATGGTGGGGGC AGACATACACAGTAAATATTCATGCGACAGATGGTGGGGGC < 41bp 0.704202278058899 0.37732451932392 0.8553614 0.23124301 prediction 0.408404556117798 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475338 chr5:140475340 nonsynonymous SNV 0.815 2 23 hm5C_associated_SNPs_95007 0 0 1 SND1 POSTAR2 ENCODE chr5:140475339-140475375
64251 chr17 72745117 72745117 1 + C T rs376568959 72745115 + 72745095 72745135 41 AGTACATCCGGCTGGTGGAGCCCGGCTCGCCGGCCGAGAAG AGTACATCCGGCTGGTGGAGCCTGGCTCGCCGGCCGAGAAG < 41bp 0.774157359417236 0.569956312299147 0.7446245 0.543575 prediction 0.408402094236176 Functional Loss - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72745115 chr17:72745117 synonymous SNV . 0 23 hm5C_associated_SNPs_95008 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:72745097-72745118
64251 chr19 44515399 44515399 1 + G T LUAD 44515397 + 44515377 44515417 41 GAATGTGGGAAGAGCTTTAGCCGGGCTTCAAGTATTTTGAA GAATGTGGGAAGAGCTTTAGCCTGGCTTCAAGTATTTTGAA < 41bp 0.704200555449933 0.36005034941923 0.88948286 0.2551161 prediction 0.408401110899865 Functional Loss - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515397 chr19:44515399 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_95010 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515370-44515404
64251 chr5 74647329 74647329 1 + G A PRAD 74647326 + 74647306 74647346 41 TGGTTGGTAACTCCTCCTTACTCGATACTTCATCAGTACTG TGGTTGGTAACTCCTCCTTACTCAATACTTCATCAGTACTG < 41bp 0.704198364584301 0.475477186361168 0.88572735 0.44800955 prediction 0.408396729168601 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74647326 chr5:74647329 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_95013 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:74647300-74647338
64251 chr19 1251879 1251879 1 + C T BLCA 1251877 + 1251857 1251897 41 AACAGTCCGTGATGCAAGCTCTCGAGAGTCTCACGGAGACG AACAGTCCGTGATGCAAGCTCTTGAGAGTCTCACGGAGACG < 41bp 0.862152713896671 0.657959245466688 0.84876084 0.28895622 prediction 0.408386936859966 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1251877 chr19:1251879 synonymous SNV . 0 23 hm5C_associated_SNPs_95016 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1251856-1251882
64251 chr12 58001003 58001003 1 + C T rs3741417 58001001 + 58000981 58001021 41 GGGAGCACCCTGAGATGCACCGCGCAGGCCCACCCCCTCTC GGGAGCACCCTGAGATGCACCGTGCAGGCCCACCCCCTCTC < 41bp 0.844539776029907 0.64034635238264 0.17874318 0.23565349 prediction 0.408386847294534 Functional Loss - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58001001 chr12:58001003 synonymous SNV . 0 23 hm5C_associated_SNPs_95018 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr12:58001003-58001004
64251 chr1 182787719 182787719 1 + C T SKCM 182787716 + 182787696 182787736 41 GATGGGATTCTGGATAAGATCCCCACCTTCCAAGGGCTGAA GATGGGATTCTGGATAAGATCCCTACCTTCCAAGGGCTGAA < 41bp 0.704192892756386 0.476243747544894 0.0493657 0.07736847 prediction 0.408385785512771 Functional Loss - NPL ENSG00000135838 CDS Human protein_coding chr1:182787716 chr1:182787719 synonymous SNV . 0 24 hm5C_associated_SNPs_95021 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:182787719-182787757
64251 chr20 377247 377247 1 + G A OV 377244 + 377224 377264 41 GCCCCAACCCGATCCCATCTCTGGGAGGCTGCCCAGGTGGT GCCCCAACCCGATCCCATCTCTGAGAGGCTGCCCAGGTGGT < 41bp 0.8360791662958 0.631888733434307 0.870232 0.23581001 prediction 0.408380865722985 Functional Loss - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377244 chr20:377247 stopgain 0.959 0 24 hm5C_associated_SNPs_95023 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:377209-377269
64251 chr17 52993166 52993166 1 + C T LUSC 52993163 + 52993143 52993183 41 ATGAATGTGCGAGTGATGTCCGCCATATTGATGGAGAATAC ATGAATGTGCGAGTGATGTCCGCTATATTGATGGAGAATAC < 41bp 0.792228907613816 0.58803862670658 0.25070727 0.27607745 prediction 0.408380561814474 Functional Loss - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:52993163 chr17:52993166 synonymous SNV . 0 24 hm5C_associated_SNPs_95024 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr17:52993104-52993194
64251 chr11 35253106 35253106 1 + G A rs76297791 35253103 + 35253083 35253123 41 CTTGGATATACCTCTGTTTTCACGATAGAAATAAGGGAGGT CTTGGATATACCTCTGTTTTCACAATAGAAATAAGGGAGGT < 41bp 0.707279794710824 0.503093367973696 0.23789656 0.19565994 prediction 0.408372853474256 Functional Loss - CD44 ENSG00000026508 UTR3 Human protein_coding chr11:35253103 chr11:35253106 . . 0 24 hm5C_associated_SNPs_95026 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:35253100-35253120
64251 chr16 56871556 56871556 1 + C T COAD 56871553 + 56871533 56871573 41 TACTGGAGCTGATGAACAAACTGCTGAGCCCTGTCGTCCCC TACTGGAGCTGATGAACAAACTGTTGAGCCCTGTCGTCCCC < 41bp 0.777362103624958 0.573179047376344 0.113327 0.10264528 prediction 0.408366112497228 Functional Loss - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56871553 chr16:56871556 synonymous SNV . 0 24 hm5C_associated_SNPs_95027 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:56871540-56871560
64251 chr12 105150766 105150766 1 + C T UCEC 105150763 + 105150743 105150783 41 CTGCTGTCCTGCACCAGATGCGGCGGGACCAGGTGACAGAC CTGCTGTCCTGCACCAGATGCGGTGGGACCAGGTGACAGAC < 41bp 0.718836679926667 0.51465421717186 0.87032163 0.85004425 prediction 0.408364925509615 Functional Loss - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105150763 chr12:105150766 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_95028 0 0 1 ELAVL1 POSTAR2 GSE29943,GSM741174 chr12:105150758-105150778
64251 chr3 133483070 133483070 1 + C T rs113679330 133483067 + 133483047 133483087 41 AGCTTGGATGGAGGGTTTGTCTACATAGCGGGCAAGTGTGG AGCTTGGATGGAGGGTTTGTCTATATAGCGGGCAAGTGTGG < 41bp 0.704181475440477 0.478552081099887 0.9106195 0.4704416 prediction 0.408362950880953 Functional Loss - TF ENSG00000091513 CDS Human protein_coding chr3:133483067 chr3:133483070 synonymous SNV . 0 24 hm5C_associated_SNPs_95029 0 0 8 FUS POSTAR2 GSE40653,GSM998875 chr3:133483040-133483100
64251 chr7 5342477 5342477 1 + C T HNSC 5342474 + 5342454 5342494 41 TCAGGGCTGACGCTGGGGTCCGCCGTGGCCTACTGCACCTA TCAGGGCTGACGCTGGGGTCCGCTGTGGCCTACTGCACCTA < 41bp 0.704259165809872 0.50008066441085 0.23309365 0.2772601 prediction 0.408357002798043 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5342474 chr7:5342477 synonymous SNV . 0 24 hm5C_associated_SNPs_95030 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:5342450-5342481
64251 chr1 66064443 66064443 1 + G A UCEC 66064440 + 66064420 66064460 41 GGGCAAGAGACTGGATGGCCCAGGAATCTGGAGTGACTGGA GGGCAAGAGACTGGATGGCCCAGAAATCTGGAGTGACTGGA < 41bp 0.796161013385933 0.59198804272324 0.6699182 0.24777594 prediction 0.408345941325387 Functional Loss - LEPR ENSG00000116678 CDS Human protein_coding chr1:66064440 chr1:66064443 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_95035 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:66064415-66064470
64251 chr19 30101396 30101396 1 + C T UCEC 30101393 + 30101373 30101413 41 CCCCGCATGAGCCCGCAGGCCCGCGAGGACCAGCTGCAGCG CCCCGCATGAGCCCGCAGGCCCGTGAGGACCAGCTGCAGCG < 41bp 0.704166032260323 0.496070211863144 0.112445265 0.17328006 prediction 0.408332064520646 Functional Loss - POP4 ENSG00000105171 CDS Human protein_coding chr19:30101393 chr19:30101396 synonymous SNV . 0 24 hm5C_associated_SNPs_95042 0 0 3 DDX3X POSTAR2 ENCODE chr19:30101315-30101397
64251 chr11 7631561 7631561 1 + G A COAD 7631558 + 7631538 7631578 41 CATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTG CATCTCTTGAGACCCAGAAGCTCAATCTGATGACTGAAGTG < 41bp 0.704165182781686 0.458011024026753 0.36073405 0.8651613 prediction 0.408330365563373 Functional Loss - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7631558 chr11:7631561 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_95044 0 0 2 GRWD1 POSTAR2 ENCODE chr11:7631537-7631654
64251 chr19 57956327 57956327 1 + G T UCEC 57956323 + 57956303 57956343 41 GCTACAAACTTGTTATTCATCAGAGAATTCACACTGGAGAA GCTACAAACTTGTTATTCATCAGATAATTCACACTGGAGAA < 41bp 0.704161518697716 0.497693258020756 0.6677759 0.23775235 prediction 0.408323037395433 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57956323 chr19:57956327 nonsynonymous SNV 0.773 1 25 hm5C_associated_SNPs_95046 0 0 1 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr19:57956318-57956339
64251 chr19 19637067 19637067 1 + C T LUAD 19637065 + 19637045 19637085 41 TAATGAAGTGGAACCGTGAGCGCAGGTAGGGCCCCTGGTGG TAATGAAGTGGAACCGTGAGCGTAGGTAGGGCCCCTGGTGG < 41bp 0.825819813100305 0.621666795175693 0.41165757 0.48436412 prediction 0.408306035849224 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19637065 chr19:19637067 synonymous SNV . 0 23 hm5C_associated_SNPs_95051 0 0 5 DDX55 POSTAR2 ENCODE chr19:19637045-19637068
64251 chr17 1657516 1657516 1 + G A rs150688695 1657513 + 1657493 1657533 41 CAGTCCACCCTGGAGCTCAGCGAGGTCGGCGTGGAGGCGGC CAGTCCACCCTGGAGCTCAGCGAAGTCGGCGTGGAGGCGGC < 41bp 0.8289579028171 0.624806791534574 0.8934866 0.84219944 prediction 0.408302222565051 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657513 chr17:1657516 synonymous SNV . 0 24 hm5C_associated_SNPs_95052 0 0 3 RPS3 POSTAR2 ENCODE chr17:1657490-1657538
64251 chr14 76905859 76905859 1 + G T LUSC 76905855 + 76905835 76905875 41 CTGGCCCTGGGCACCCACGCCAACGGTCTGGACTCGCCACC CTGGCCCTGGGCACCCACGCCAACTGTCTGGACTCGCCACC < 41bp 0.735845255423203 0.531697119461311 0.39201468 0.2689739 prediction 0.408296271923784 Functional Loss - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76905855 chr14:76905859 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_95054 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:76905856-76905876
64251 chr6 17601099 17601099 1 + G C BLCA 17601098 + 17601078 17601118 41 CTCCCCGCAGAGCTTCCCTTCGGGCGGCGCTGCAGTCCCCC CTCCCCGCAGAGCTTCCCTTCCGGCGGCGCTGCAGTCCCCC < 41bp 0.8937430469462 0.689611575090317 0.92063826 0.91008604 prediction 0.408262943711766 Functional Loss - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17601098 chr6:17601099 synonymous SNV . 0 22 hm5C_associated_SNPs_95068 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:17601089-17601112
64251 chr19 13059109 13059109 1 + C T SARC 13059107 + 13059087 13059127 41 ATGTCCCATCCCCCACCTGCCGCCAGAGAGGACAAGAGCCC ATGTCCCATCCCCCACCTGCCGTCAGAGAGGACAAGAGCCC < 41bp 0.857064609755751 0.652935811354121 0.34163237 0.19524741 prediction 0.408257596803258 Functional Loss - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059107 chr19:13059109 nonsynonymous SNV 0.482 0 23 hm5C_associated_SNPs_95070 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:13059089-13059112
64251 chr15 49620172 49620172 1 + G T LUSC 49620169 + 49620149 49620189 41 GAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGAT GAAGTTTGGGGCTCAAGGGTCACTACTTACTGGAGCAGGAT < 41bp 0.704126655535328 0.321884880103317 0.083283156 0.051400542 prediction 0.408253311070655 Functional Loss - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49620169 chr15:49620172 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_95072 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:49620142-49620172
64251 chr11 125482606 125482606 1 + G A BLCA 125482603 + 125482583 125482623 41 AGTCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTCCAC AGTCGTCCAGACAAGAAGAGCAAAAAGCAACAGGATTCCAC < 41bp 0.70411821243874 0.470757260627425 0.24547553 0.32154316 prediction 0.40823642487748 Functional Loss - STT3A ENSG00000134910 CDS Human protein_coding chr11:125482603 chr11:125482606 synonymous SNV . 0 24 hm5C_associated_SNPs_95081 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:125482517-125482640
64251 chr4 144445600 144445600 1 + G A UCEC 144445597 + 144445577 144445617 41 CAAAGCAACCAATGTTTGCACTCGATTTGAAGACTCTCCAT CAAAGCAACCAATGTTTGCACTCAATTTGAAGACTCTCCAT < 41bp 0.789979152492384 0.585861986274773 0.32415998 0.07425547 prediction 0.408234332435223 Functional Loss - SMARCA5 ENSG00000153147 CDS Human protein_coding chr4:144445597 chr4:144445600 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_95082 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr4:144445573-144445612
64251 chr7 2473737 2473737 1 + C T rs575367473 2473735 + 2473715 2473755 41 AGTAAAATATCCCCTCTCCCCTCCGCCCGCCCACCCGCCCG AGTAAAATATCCCCTCTCCCCTTCGCCCGCCCACCCGCCCG < 41bp 0.735783758483223 0.531668072663695 0.2723801 0.13421917 prediction 0.408231371639055 Functional Loss - CHST12 ENSG00000136213 UTR3 Human protein_coding chr7:2473735 chr7:2473737 . . 0 23 hm5C_associated_SNPs_95084 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:2473706-2473743
64251 chr22 30163512 30163512 1 + C T SKCM 30163510 + 30163490 30163530 41 GCCTTCGATCAAGGCGCGGACGCTATCTACGACCACATCAA GCCTTCGATCAAGGCGCGGACGTTATCTACGACCACATCAA < 41bp 0.704113661952457 0.432318721704293 0.3101223 0.39012235 prediction 0.408227323904913 Functional Loss - UQCR10 ENSG00000184076 CDS Human protein_coding chr22:30163510 chr22:30163512 nonsynonymous SNV 0.968 2 23 hm5C_associated_SNPs_95087 0 0 21 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:30163400-30163520
64251 chr1 3328268 3328268 1 + G T LIHC 3328266 + 3328246 3328286 41 GGGGAGCCTGCCCTTCTCCACGGCGCCTCCCACGTTCCCCG GGGGAGCCTGCCCTTCTCCACGTCGCCTCCCACGTTCCCCG < 41bp 0.704111390118694 0.338876338295373 0.34520513 0.066652 prediction 0.408222780237387 Functional Loss - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3328266 chr1:3328268 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_95088 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:3328241-3328287
64251 chr14 68114830 68114830 1 + A C LUAD 68114829 + 68114809 68114849 41 CCCTACACTGGCTCCAGCCACAGGAACTCCTGTTGTCGGGG CCCTACACTGGCTCCAGCCACCGGAACTCCTGTTGTCGGGG < 41bp 0.849931302729264 0.645820173701452 0.72740597 0.37809545 prediction 0.408222258055623 Functional Loss - ARG2 ENSG00000081181 CDS Human protein_coding chr14:68114829 chr14:68114830 synonymous SNV . 0 22 hm5C_associated_SNPs_95089 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:68114805-68114840
64251 chr3 130717163 130717163 1 + G A CESC 130717160 + 130717140 130717180 41 ACGAGACAATGTGATTACACCTCGAGACACAACAATGACCT ACGAGACAATGTGATTACACCTCAAGACACAACAATGACCT < 41bp 0.712499698797642 0.508389071474485 0.5687175 0.05893293 prediction 0.408221254646314 Functional Loss - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130717160 chr3:130717163 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_95090 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:130717140-130717164
64251 chrX 147014238 147014238 1 + T C UCEC 147014237 + 147014217 147014257 41 TGAAAAAAGCTAGAAGCTTTCTCGAATTTGCTGAAGATGTA TGAAAAAAGCTAGAAGCTTTCCCGAATTTGCTGAAGATGTA < 41bp 0.839253633997655 0.635152312537877 0.22791228 0.09388462 prediction 0.408202642919556 Functional Loss - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147014237 chrX:147014238 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_95098 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147014200-147014260
64251 chr22 50615757 50615757 1 + G A UCEC 50615754 + 50615734 50615774 41 ACGCGGAGAAGGAGAAGAGCCCGGAGCAGAACCTGTTCGAG ACGCGGAGAAGGAGAAGAGCCCGAAGCAGAACCTGTTCGAG < 41bp 0.818626188577909 0.614526664887192 0.83658075 0.3243638 prediction 0.408199047381434 Functional Loss - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615754 chr22:50615757 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_95100 0 0 1 UCHL5 POSTAR2 ENCODE chr22:50615737-50615861
64251 chr10 72520941 72520941 1 + G A rs369934403 72520938 + 72520918 72520958 41 GGGCCTGGGCAGGTCTGAATCCCGGCTGGTCTGTAGCTAGA GGGCCTGGGCAGGTCTGAATCCCAGCTGGTCTGTAGCTAGA < 41bp 0.704096795775874 0.44778162730716 0.45313996 0.30173212 prediction 0.408193591551748 Functional Loss - ADAMTS14 ENSG00000138316 UTR3 Human protein_coding chr10:72520938 chr10:72520941 . . 0 24 hm5C_associated_SNPs_95104 0 0 2 UPF1 POSTAR2 ENCODE chr10:72520940-72521112
64251 chr1 206821952 206821952 1 + G A UCEC 206821949 + 206821929 206821969 41 TGTGCTTGTGGGGGGTCGCTCACGTAGGGGTAAAAAGCGGG TGTGCTTGTGGGGGGTCGCTCACATAGGGGTAAAAAGCGGG < 41bp 0.704096638499311 0.453940310979026 0.4150249 0.21676412 prediction 0.408193276998623 Functional Loss - DYRK3 ENSG00000143479 CDS Human protein_coding chr1:206821949 chr1:206821952 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_95106 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:206821946-206821978
64251 chr7 158649366 158649366 1 + G C rs571952764 158649362 + 158649342 158649382 41 GTGCGGGGCACAGGTGGCCTCTTCGGGGTGGACCGCGCCTG GTGCGGGGCACAGGTGGCCTCTTCCGGGTGGACCGCGCCTG < 41bp 0.870330079538767 0.66623757777161 0.6537364 0.44120514 prediction 0.408185003534314 Functional Loss - WDR60 ENSG00000126870 UTR5 Human protein_coding chr7:158649362 chr7:158649366 . . 0 25 hm5C_associated_SNPs_95110 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:158649365-158649366
64251 chr1 163325167 163325167 1 + G A GBM 163325164 + 163325144 163325184 41 AAACTGCTTTGGAGAAATACCACGACGGTATTGAAAAGGCA AAACTGCTTTGGAGAAATACCACAACGGTATTGAAAAGGCA < 41bp 0.750842386179109 0.546750527215138 0.14412993 0.07905543 prediction 0.408183717927942 Functional Loss - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163325164 chr1:163325167 nonsynonymous SNV 0.923 1 24 hm5C_associated_SNPs_95111 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:163325133-163325168
64251 chrX 103045517 103045517 1 + C T LUAD 103045514 + 103045494 103045534 41 CTTAAACTCATGGGCCGAGGCACCAAGTTCTGATCCCCCGT CTTAAACTCATGGGCCGAGGCACTAAGTTCTGATCCCCCGT < 41bp 0.77665846959812 0.572572780919905 0.056807905 0.059350193 prediction 0.40817137735643 Functional Loss - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103045514 chrX:103045517 synonymous SNV . 0 24 hm5C_associated_SNPs_95114 0 0 2 MBNL2 POSTAR2 GSE68890,GSM1685415 chrX:103045460-103045540
64251 chr16 67876720 67876720 1 + G C HNSC 67876719 + 67876699 67876739 41 CGCTGCGCGGCGTCAATGAGCGCAAAGTAGCGCGCAGACCC CGCTGCGCGGCGTCAATGAGCCCAAAGTAGCGCGCAGACCC < 41bp 0.897609941956935 0.693529965669099 0.3058431 0.18630955 prediction 0.408159952575674 Functional Loss - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67876719 chr16:67876720 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_95119 0 0 1 DDX3X POSTAR2 ENCODE chr16:67876718-67876765
64251 chr18 9513181 9513181 1 + G A UCEC 9513178 + 9513158 9513198 41 CCTGGATTGTACCGCACTGGCGAGCCCTCACCTCCCCATGA CCTGGATTGTACCGCACTGGCGAACCCTCACCTCCCCATGA < 41bp 0.704076429855419 0.440002767730587 0.37714905 0.058408886 prediction 0.408152859710839 Functional Loss - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9513178 chr18:9513181 synonymous SNV . 0 24 hm5C_associated_SNPs_95125 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:9513119-9513189
64251 chr19 47775010 47775010 1 + G A rs528243826 47775007 + 47774987 47775027 41 TGTGCGCGCGCGCGCGCGCGCGCGCGCGCGCTAGAGGGGTG TGTGCGCGCGCGCGCGCGCGCGCACGCGCGCTAGAGGGGTG < 41bp 0.810496820814935 0.606422338931897 0.56694967 0.31760094 prediction 0.408148963766076 Functional Loss - CCDC9 ENSG00000105321 UTR3 Human protein_coding chr19:47775007 chr19:47775010 . . 0 24 hm5C_associated_SNPs_95127 0 0 29 BUD13 POSTAR2 ENCODE chr19:47774974-47775088
64251 chr18 33754520 33754520 1 + A C BLCA 33754519 + 33754499 33754539 41 AAAAACTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTAC AAAAACTGAACAGAAGGAAGCCGAAGGTGCTGAGTGGTTAC < 41bp 0.704073703322611 0.452063484440173 0.65684694 0.42331442 prediction 0.408147406645222 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33754519 chr18:33754520 synonymous SNV . 0 22 hm5C_associated_SNPs_95128 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:33754475-33754527
64251 chr11 1477642 1477642 1 + G A rs33996815 1477639 + 1477619 1477659 41 CCGGGCCGAGTACAAGGCCACGGGGGGGCCAGCCGTGTTCC CCGGGCCGAGTACAAGGCCACGGAGGGGCCAGCCGTGTTCC < 41bp 0.816756024884749 0.612682896104752 0.9140805 0.875156 prediction 0.408146257559994 Functional Loss - BRSK2 ENSG00000174672 CDS Human protein_coding chr11:1477639 chr11:1477642 nonsynonymous SNV 0.050 1 24 hm5C_associated_SNPs_95129 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:1477595-1477648
64251 chr5 150838400 150838400 1 + C T SKCM 150838398 + 150838378 150838418 41 GAAGACTACCACGACTACAGCTCCACGGACGTGAGCCCTGA GAAGACTACCACGACTACAGCTTCACGGACGTGAGCCCTGA < 41bp 0.704072672744402 0.401278290984446 0.43116438 0.06360003 prediction 0.408145345488804 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838398 chr5:150838400 nonsynonymous SNV 0.985 0 23 hm5C_associated_SNPs_95130 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:150838400-150838401
64251 chr5 150838401 150838401 1 + C T SKCM 150838398 + 150838378 150838418 41 GAAGACTACCACGACTACAGCTCCACGGACGTGAGCCCTGA GAAGACTACCACGACTACAGCTCTACGGACGTGAGCCCTGA < 41bp 0.704072672744402 0.468471814120809 0.43116438 0.39104977 prediction 0.408145345488804 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838398 chr5:150838401 synonymous SNV . 0 24 hm5C_associated_SNPs_95131 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:150838400-150838401
64251 chr16 3071633 3071633 1 + G A STAD 3071630 + 3071610 3071650 41 CTCTGAGCCTGACCTTCGTGCTGGGGCTGCTTTCTGGCTTT CTCTGAGCCTGACCTTCGTGCTGAGGCTGCTTTCTGGCTTT < 41bp 0.845471918589941 0.641399312702086 0.8893569 0.52131975 prediction 0.408145211775709 Functional Loss - TNFRSF12A ENSG00000006327 CDS Human protein_coding chr16:3071630 chr16:3071633 nonsynonymous SNV 0.864 1 24 hm5C_associated_SNPs_95132 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:3071595-3071636
64251 chr12 65859730 65859730 1 + C T rs575588544 65859728 + 65859708 65859748 41 CAGAGGCACACACAGCACCTCTCGGCTGCTCCAGCTCTGTA CAGAGGCACACACAGCACCTCTTGGCTGCTCCAGCTCTGTA < 41bp 0.723692896596059 0.519622421567948 0.03590578 0.010027558 prediction 0.40814095005622 Functional Loss - MSRB3 ENSG00000174099 UTR3 Human protein_coding chr12:65859728 chr12:65859730 . . 0 23 hm5C_associated_SNPs_95134 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:65859714-65859750
64251 chr17 34068121 34068121 1 + G A COAD 34068118 + 34068098 34068138 41 AGCGGGACCTGCAGCGCGGACGCGTGATCCCGCGCTGGAAC AGCGGGACCTGCAGCGCGGACGCATGATCCCGCGCTGGAAC < 41bp 0.81743308003466 0.613371675709246 0.3850229 0.23353231 prediction 0.408122808650828 Functional Loss - RASL10B ENSG00000141150 CDS Human other chr17:34068118 chr17:34068121 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_95141 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:34068097-34068121
64251 chr16 105857 105857 1 + G A CESC 105854 + 105834 105874 41 ACGTGCAGCTCAAGCAGGAGCGTGAAGGGGGCATTCAGCAC ACGTGCAGCTCAAGCAGGAGCGTAAAGGGGGCATTCAGCAC < 41bp 0.820431477726616 0.616376003032351 0.4598242 0.14591965 prediction 0.40811094938853 Functional Loss - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:105854 chr16:105857 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_95148 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:105833-105880
64251 chr22 32302402 32302402 1 + G A LUSC 32302399 + 32302379 32302419 41 GATCGGCTGCTGAAGGACTTCACGGACTTCTGCATCAACCG GATCGGCTGCTGAAGGACTTCACAGACTTCTGCATCAACCG < 41bp 0.752380670169184 0.548327254627613 0.077999264 0.057607263 prediction 0.408106831083143 Functional Loss - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32302399 chr22:32302402 synonymous SNV . 0 24 hm5C_associated_SNPs_95150 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr22:32302395-32302419
64251 chr12 863095 863095 1 + G A BLCA 863092 + 863072 863112 41 GTGCTCCACCGGAGCCCCACCGGGAAGAGACCGTGACCGCC GTGCTCCACCGGAGCCCCACCGGAAAGAGACCGTGACCGCC < 41bp 0.809795311328264 0.605747814885478 0.89252913 0.3716777 prediction 0.408094992885572 Functional Loss - WNK1 ENSG00000060237 CDS Human protein_coding chr12:863092 chr12:863095 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_95154 0 0 1 METAP2 POSTAR2 ENCODE chr12:862992-863126
64251 chr15 92459421 92459421 1 + G A STAD 92459418 + 92459398 92459438 41 GCGCGCTGCTGTCGGCGCTGCCCGAGTTCCTGACCCACCAG GCGCGCTGCTGTCGGCGCTGCCCAAGTTCCTGACCCACCAG < 41bp 0.831152448448538 0.627107217504238 0.87801325 0.60830563 prediction 0.4080904618886 Functional Loss - SLCO3A1 ENSG00000176463 CDS Human protein_coding chr15:92459418 chr15:92459421 nonsynonymous SNV 0.973 4 24 hm5C_associated_SNPs_95156 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:92459411-92459438
64251 chr22 38470393 38470393 1 + G A UCEC 38470390 + 38470370 38470410 41 CCTGCGCTGCCGCCAGGAGGCGCGCGCCCGCTTCTCCCAGA CCTGCGCTGCCGCCAGGAGGCGCACGCCCGCTTCTCCCAGA < 41bp 0.814388046697518 0.610344127667695 0.36749706 0.172607 prediction 0.408087838059647 Functional Loss - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38470390 chr22:38470393 nonsynonymous SNV 0.836 4 24 hm5C_associated_SNPs_95157 0 0 2 PPIG POSTAR2 ENCODE chr22:38470373-38470453
64251 chr16 842518 842518 1 + C T rs35387463 842515 + 842495 842535 41 GCCACAGGGCCCGGCTGTGCCTTCGGGAGGCGGCCGACGGC GCCACAGGGCCCGGCTGTGCCTTTGGGAGGCGGCCGACGGC < 41bp 0.725155587364308 0.521118694651834 0.3178195 0.23393595 prediction 0.408073785424948 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842515 chr16:842518 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_95164 0 0 1 PPIG POSTAR2 ENCODE chr16:842506-842556
64251 chr8 427624 427624 1 + G A rs561725765 427621 + 427601 427641 41 GTACACACAGGGGAGTGAAGCAGGGCTTGGAGCAGATGGTA GTACACACAGGGGAGTGAAGCAGAGCTTGGAGCAGATGGTA < 41bp 0.781532298028861 0.577498223315761 0.8987782 0.85859036 prediction 0.408068149426201 Functional Loss - FBXO25;TDRP ENSG00000272005 ncRNA_exonic Human other chr8:427621 chr8:427624 . . 0 24 hm5C_associated_SNPs_95165 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:427613-427633
64251 chr12 57485457 57485457 1 + T C ACC 57485456 + 57485436 57485476 41 CTCGCCCCCCTTCTCCCCCCCTGCAGGGGGAGGAGTCCCTG CTCGCCCCCCTTCTCCCCCCCCGCAGGGGGAGGAGTCCCTG < 41bp 0.845971224763006 0.641938055730452 0.8114159 0.39288566 prediction 0.408066338065108 Functional Loss - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485456 chr12:57485457 synonymous SNV . 0 22 hm5C_associated_SNPs_95167 0 0 1 GRSF1 POSTAR2 ENCODE chr12:57485416-57485508
64251 chr9 131846957 131846957 1 + T C rs11541836 131846956 + 131846936 131846976 41 TGTCTTGCCAGGTGATCTCTCTGGCCACCTCCTTGCCTACC TGTCTTGCCAGGTGATCTCTCCGGCCACCTCCTTGCCTACC < 41bp 0.704031403511853 0.463501437990549 0.8996713 0.935367 prediction 0.408062807023705 Functional Loss - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846956 chr9:131846957 synonymous SNV . 0 22 hm5C_associated_SNPs_95172 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:131846940-131846960
64251 chr16 86544699 86544699 1 + C T COAD 86544697 + 86544677 86544717 41 GACACCTACGGCTTCCAGGGCTCGGCCGGCGGCCTCTCGTG GACACCTACGGCTTCCAGGGCTTGGCCGGCGGCCTCTCGTG < 41bp 0.823820290389504 0.619790990405006 0.3209793 0.29512072 prediction 0.408058599968998 Functional Loss - FOXF1 ENSG00000103241 CDS Human protein_coding chr16:86544697 chr16:86544699 nonsynonymous SNV 0.972 3 23 hm5C_associated_SNPs_95178 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:86544660-86544704
64251 chr19 53086361 53086361 1 + G A HNSC 53086358 + 53086338 53086378 41 AAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAAT AAGACATAGGAGAATTCACACTGAAGAGAAACCATACAAAT < 41bp 0.790596017246235 0.586568655284043 0.16211411 0.030993432 prediction 0.408054723924384 Functional Loss - ZNF701 ENSG00000167562 CDS Human protein_coding chr19:53086358 chr19:53086361 nonsynonymous SNV 0.032 2 24 hm5C_associated_SNPs_95180 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:53086342-53086366
64251 chr22 46238933 46238933 1 + G A UCEC 46238930 + 46238910 46238950 41 CCGAAGACAACAGCCAAAACCAAGATTTGATTGCAAAGATG CCGAAGACAACAGCCAAAACCAAAATTTGATTGCAAAGATG < 41bp 0.799961966364699 0.595940168797606 0.4819351 0.23417857 prediction 0.408043595134186 Functional Loss - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46238930 chr22:46238933 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_95181 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:46238907-46238940
64251 chr4 151504741 151504741 1 + G T COAD 151504737 + 151504717 151504757 41 TCTGGCCTCGCAGCGCGGCACAGTGGCCTATGCCCCACATC TCTGGCCTCGCAGCGCGGCACAGTTGCCTATGCCCCACATC < 41bp 0.720223956808583 0.516205050077539 0.72400373 0.37024724 prediction 0.408037813462089 Functional Loss - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504737 chr4:151504741 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_95182 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr4:151504714-151504745
64251 chr2 179444336 179444336 1 + C T SKCM 179444333 + 179444313 179444353 41 GATTTCGCTTGGGGTTCCTTCTCCATTTTCATTCTCAGCAC GATTTCGCTTGGGGTTCCTTCTCTATTTTCATTCTCAGCAC < 41bp 0.722925496322651 0.518908054689145 0.96675384 0.9090973 prediction 0.408034883267012 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179444333 chr2:179444336 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95183 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:179444335-179444358
64251 chr17 40458321 40458321 1 + C T GBM 40458318 + 40458298 40458338 41 CCGCAGCTGTGTGAGGCGCTCAACATGAAATTCAAGGCCGA CCGCAGCTGTGTGAGGCGCTCAATATGAAATTCAAGGCCGA < 41bp 0.704015306733811 0.480739505305693 0.3196154 0.2483238 prediction 0.408030613467622 Functional Loss - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40458318 chr17:40458321 synonymous SNV . 0 24 hm5C_associated_SNPs_95186 0 0 1 FXR2 POSTAR2 ENCODE chr17:40458258-40458324
64251 chr16 19125383 19125383 1 + G A rs113358776 19125380 + 19125360 19125400 41 CCCCCTCGGAAGAGGAAACTCCCGGGGTCCGAGTAACAGGG CCCCCTCGGAAGAGGAAACTCCCAGGGTCCGAGTAACAGGG < 41bp 0.801710595924738 0.597696972987726 0.64781785 0.18602186 prediction 0.408027245874024 Functional Loss - ITPRIPL2 ENSG00000205730;ENSG00000261427 CDS Human other chr16:19125380 chr16:19125383 nonsynonymous SNV 0.148 0 24 hm5C_associated_SNPs_95189 0 0 1 DDX3X POSTAR2 ENCODE chr16:19125331-19125386
64251 chr22 24836575 24836575 1 + G A UCEC 24836572 + 24836552 24836592 41 TACAATGGCTTGGTGACCGGCACGAGGGCTAAGGGCATCAT TACAATGGCTTGGTGACCGGCACAAGGGCTAAGGGCATCAT < 41bp 0.799514702468063 0.595501548658804 0.38196075 0.44975916 prediction 0.408026307618518 Functional Loss - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24836572 chr22:24836575 synonymous SNV . 0 24 hm5C_associated_SNPs_95190 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr22:24836564-24836594
64251 chr3 158262013 158262013 1 + G A SKCM 158262010 + 158261990 158262030 41 GATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCTCCG GATGCTGAGGAAAAATGGTTCAAAAGATTAATTGCTCTCCG < 41bp 0.729849204406542 0.525838897735255 0.87660325 0.34261915 prediction 0.408020613342574 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:158262010 chr3:158262013 synonymous SNV . 0 24 hm5C_associated_SNPs_95195 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr3:158261987-158262026
64251 chr6 26045665 26045665 1 + C T OV 26045663 + 26045643 26045683 41 CTCGTACGAAGCAAACAGCTCGCAAGTCTACCGGCGGCAAA CTCGTACGAAGCAAACAGCTCGTAAGTCTACCGGCGGCAAA < 41bp 0.803207916092223 0.599200875752344 0.21981016 0.1765036 prediction 0.408014080679757 Functional Loss - HIST1H3C ENSG00000196532 CDS Human other chr6:26045663 chr6:26045665 synonymous SNV . 0 23 hm5C_associated_SNPs_95196 0 0 3 DDX3X POSTAR2 ENCODE chr6:26045660-26045694
64251 chr1 110039779 110039779 1 + T C rs146014252 110039778 + 110039758 110039798 41 TCAGGATCCGGGCTTGAGGGCTGCAGGGCCTGCGTGCGCTC TCAGGATCCGGGCTTGAGGGCCGCAGGGCCTGCGTGCGCTC < 41bp 0.713901201377223 0.509894900089538 0.45138282 0.35596055 prediction 0.40801260257537 Functional Loss - CYB561D1 ENSG00000174151 UTR3 Human protein_coding chr1:110039778 chr1:110039779 . . 0 22 hm5C_associated_SNPs_95198 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:110039760-110039786
64251 chr1 156845920 156845920 1 + G T UCEC 156845916 + 156845896 156845936 41 ACATCGTGCTCAAGTGGGAGCTGGGGGAGGGCGCCTTTGGG ACATCGTGCTCAAGTGGGAGCTGGTGGAGGGCGCCTTTGGG < 41bp 0.736001280036253 0.531998430721861 0.87878394 0.7005497 prediction 0.408005698628784 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156845916 chr1:156845920 nonsynonymous SNV 0.954 5 25 hm5C_associated_SNPs_95199 0 0 2 DDX24 POSTAR2 ENCODE chr1:156845904-156845973
64251 chr22 50278879 50278879 1 + T C rs61731525 50278878 + 50278858 50278898 41 GGGTGCAAGTCTGGCAAACTCTCCGTATGCCACTTTGGCCT GGGTGCAAGTCTGGCAAACTCCCCGTATGCCACTTTGGCCT < 41bp 0.832983134019779 0.628982288196197 0.22556332 0.037812382 prediction 0.408001691647164 Functional Loss - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278878 chr22:50278879 synonymous SNV . 0 22 hm5C_associated_SNPs_95201 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50278840-50278880
64251 chr14 71374232 71374232 1 + G C rs565675471 71374228 + 71374208 71374248 41 GGCGGGGGTCGCGGCGGCGGCAGTGGGGGCGCTGGCGGGCC GGCGGGGGTCGCGGCGGCGGCAGTCGGGGCGCTGGCGGGCC < 41bp 0.848299015190587 0.644299128667153 0.9119309 0.85207635 prediction 0.407999773046868 Functional Loss - PCNX1 ENSG00000100731 UTR5 Human protein_coding chr14:71374228 chr14:71374232 . . 0 25 hm5C_associated_SNPs_95202 0 0 4 DDX3X POSTAR2 ENCODE chr14:71374180-71374237
64251 chr2 28635264 28635264 1 + C T LUAD 28635261 + 28635241 28635281 41 GCTCACCGCAGAAGCAGTAGCAGCGGGGACCAATCATCAGA GCTCACCGCAGAAGCAGTAGCAGTGGGGACCAATCATCAGA < 41bp 0.733415055019156 0.529422147230305 0.23486495 0.15619755 prediction 0.407985815577701 Functional Loss - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28635261 chr2:28635264 synonymous SNV . 0 24 hm5C_associated_SNPs_95206 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:28635260-28635300
64251 chr4 7032648 7032648 1 + T C rs149116991 7032647 + 7032627 7032667 41 ATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATGTG ATTAAAGGAACAGGGGCTCTCCGAGGATGGCCACTGATGTG < 41bp 0.703991187425494 0.49823445901746 0.4356274 0.9224502 prediction 0.407982374850989 Functional Loss - LOC100129931 ENSG00000245748 ncRNA_exonic Human antisense chr4:7032647 chr4:7032648 . . 0 22 hm5C_associated_SNPs_95207 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:7032621-7032649
64251 chr12 27841326 27841326 1 + C T LUSC 27841324 + 27841304 27841344 41 TGGCAGAATATGCGCCCAATCTCAGAGGCAGTGGTGTCCAT TGGCAGAATATGCGCCCAATCTTAGAGGCAGTGGTGTCCAT < 41bp 0.703989686468219 0.404474632851015 0.11176965 0.17362204 prediction 0.407979372936438 Functional Loss - PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27841324 chr12:27841326 synonymous SNV . 0 23 hm5C_associated_SNPs_95208 0 0 2 FASTKD2 POSTAR2 ENCODE chr12:27841230-27841348
64251 chr12 112451304 112451304 1 + C T UCEC 112451302 + 112451282 112451322 41 GTGCCCCGCGCCGCATTTCTCTCCCCGCTGCTTCCCCTTCT GTGCCCCGCGCCGCATTTCTCTTCCCGCTGCTTCCCCTTCT < 41bp 0.703989344772413 0.452568968027577 0.4543793 0.38045925 prediction 0.407978689544826 Functional Loss - ERP29 ENSG00000089248 CDS Human protein_coding chr12:112451302 chr12:112451304 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_95209 0 0 14 EIF3B POSTAR2 GSE65004,GSM1585667 chr12:112451276-112451308
64251 chr5 134190898 134190898 1 + G C LUAD 134190897 + 134190877 134190917 41 CCACCAAATCAGCAGGATACCGGACCAGCACAGGCAGACCC CCACCAAATCAGCAGGATACCCGACCAGCACAGGCAGACCC < 41bp 0.703984136813734 0.395372440202211 0.3102002 0.06874049 prediction 0.407968273627468 Functional Loss - C5orf24 ENSG00000181904 CDS Human protein_coding chr5:134190897 chr5:134190898 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_95218 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:134190877-134190929
64251 chr1 155582320 155582320 1 + C T GBM 155582317 + 155582297 155582337 41 CCTTGGGTGGGAGCCTGGGCCTGCGACCCGAGCCACCTGTC CCTTGGGTGGGAGCCTGGGCCTGTGACCCGAGCCACCTGTC < 41bp 0.762368691345423 0.55838551866636 0.3253218 0.376226 prediction 0.407966345358126 Functional Loss - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582317 chr1:155582320 stopgain 0.077 0 24 hm5C_associated_SNPs_95220 0 0 2 FMR1 POSTAR2 ENCODE chr1:155582253-155582339
64251 chr22 18570857 18570857 1 + A C rs201117077 18570856 + 18570836 18570876 41 GACTGAGGGTCCCTGCGCACCACAGCCTCTCTGCTCCTCAC GACTGAGGGTCCCTGCGCACCCCAGCCTCTCTGCTCCTCAC < 41bp 0.703977521825129 0.443653054910455 0.028026938 0.02062893 prediction 0.407955043650258 Functional Loss - PEX26 ENSG00000215193 UTR3 Human protein_coding chr22:18570856 chr22:18570857 . . 0 22 hm5C_associated_SNPs_95226 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:18570823-18570859
64251 chr19 14815982 14815982 1 + G A COAD 14815979 + 14815959 14815999 41 CCGCCTTGGTCTCTGGGATGCACGGTAAGCCTGGGAGAGGT CCGCCTTGGTCTCTGGGATGCACAGTAAGCCTGGGAGAGGT < 41bp 0.817246381131783 0.613269927406094 0.85113275 0.6997295 prediction 0.407952907451379 Functional Loss - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14815979 chr19:14815982 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_95229 0 0 2 BUD13 POSTAR2 ENCODE chr19:14815856-14816029
64251 chr17 79202888 79202888 1 - C A COAD 79202891 - 79202871 79202911 41 GAGCCGCGACTCCTTGTTTGCTGGCATGGAGCTGGTGGCCT GAGCCGCGACTCCTTGTTTGCTGTCATGGAGCTGGTGGCCT < 41bp 0.703976003516483 0.305198690426283 0.41802213 0.16994658 prediction 0.407952007032967 Functional Loss - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79202891 chr17:79202888 nonsynonymous SNV 0.873 4 24 hm5C_associated_SNPs_95230 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:79202859-79202891
64251 chr19 56189960 56189960 1 + G A LUAD 56189957 + 56189937 56189977 41 CGCCCCATCTCTCCACGCATCGGGGCCCTGTGCCCCTTGCT CGCCCCATCTCTCCACGCATCGGAGCCCTGTGCCCCTTGCT < 41bp 0.84464017565058 0.640671476428185 0.9615422 0.9492541 prediction 0.407937398444788 Functional Loss - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56189957 chr19:56189960 synonymous SNV . 0 24 hm5C_associated_SNPs_95237 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:56189900-56189960
64251 chr12 122614650 122614650 1 + C T COAD 122614648 + 122614628 122614668 41 GCCGGTGGCCTGGCCCAATCCCCGGGAAATAGGTAACCCAA GCCGGTGGCCTGGCCCAATCCCTGGGAAATAGGTAACCCAA < 41bp 0.703967516479603 0.418887819851447 0.4243896 0.110924274 prediction 0.407935032959206 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122614648 chr12:122614650 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_95238 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122614587-122614650
64251 chr2 86361498 86361498 1 + G A UCEC 86361495 + 86361475 86361515 41 TGGCAAGGGACAAGCACCCACCAGAGGTAGGCCTGAAACTC TGGCAAGGGACAAGCACCCACCAAAGGTAGGCCTGAAACTC < 41bp 0.703964032634414 0.458245376324446 0.5474645 0.1494928 prediction 0.407928065268829 Functional Loss - PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86361495 chr2:86361498 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_95240 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:86361427-86361498
64251 chr1 112299299 112299299 1 + G A BLCA 112299296 + 112299276 112299316 41 GTTCAAGCTAAATCTGGCACCGGGAAAACCTGTGTGTTCTC GTTCAAGCTAAATCTGGCACCGGAAAAACCTGTGTGTTCTC < 41bp 0.772193011313554 0.568232371656728 0.8870119 0.70157063 prediction 0.407921279313652 Functional Loss - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112299296 chr1:112299299 synonymous SNV . 0 24 hm5C_associated_SNPs_95242 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr1:112299282-112299299
64251 chr19 39220974 39220974 1 - G A rs148628317 39220976 - 39220956 39220996 41 AGACCCACGCCCGACGCAGACCCGGAGGAGCATCAGCAAGG AGACCCACGCCCGACGCAGACCTGGAGGAGCATCAGCAAGG < 41bp 0.712090146561694 0.508131440330526 0.1543043 0.13008535 prediction 0.407917412462336 Functional Loss - ACTN4;CAPN12 ENSG00000130402;ENSG00000182472 UTR3 Human other chr19:39220976 chr19:39220974 . . 0 23 hm5C_associated_SNPs_95246 0 0 1 UCHL5 POSTAR2 ENCODE chr19:39220883-39221062
64251 chr10 101577097 101577097 1 + G A COAD 101577094 + 101577074 101577114 41 GCCTATGTCCCACAGCAGTCCTGGATTCAGAATGGCACCAT GCCTATGTCCCACAGCAGTCCTGAATTCAGAATGGCACCAT < 41bp 0.80932526481263 0.605370799273576 0.1685395 0.13549781 prediction 0.407908931078107 Functional Loss - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101577094 chr10:101577097 stopgain 1.000 1 24 hm5C_associated_SNPs_95250 0 0 7 BUD13 POSTAR2 ENCODE chr10:101577010-101577113
64251 chr7 116403173 116403173 1 + C T UCEC 116403170 + 116403150 116403190 41 CTTCCCTGCAACAGCTGAATCTGCAACTCCCCCTGAAAACC CTTCCCTGCAACAGCTGAATCTGTAACTCCCCCTGAAAACC < 41bp 0.703951178796774 0.487880192992919 0.04971105 0.07255304 prediction 0.407902357593548 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116403170 chr7:116403173 stopgain 1.000 1 24 hm5C_associated_SNPs_95253 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:116403142-116403174
64251 chr1 82456404 82456404 1 + C T SKCM 82456401 + 82456381 82456421 41 GCGACAACCCAGGGCTGGAGCTCCATCACAAAGAACTCGAG GCGACAACCCAGGGCTGGAGCTCTATCACAAAGAACTCGAG < 41bp 0.750561549497191 0.546612798221989 0.43068895 0.27827322 prediction 0.407897502550404 Functional Loss - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456401 chr1:82456404 nonsynonymous SNV 0.701 1 24 hm5C_associated_SNPs_95255 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr1:82456362-82456438
64251 chr12 6952582 6952582 1 + C T LUAD 6952579 + 6952559 6952599 41 CATGACCTGTGCCTATGCCCCATCAGGGAACTTTGTGGCAT CATGACCTGTGCCTATGCCCCATTAGGGAACTTTGTGGCAT < 41bp 0.703945935303674 0.48106740121043 0.099030614 0.046855062 prediction 0.407891870607349 Functional Loss - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6952579 chr12:6952582 nonsynonymous SNV 0.982 2 24 hm5C_associated_SNPs_95256 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:6952582-6952613
64251 chr4 1808309 1808309 1 + G A COAD 1808306 + 1808286 1808326 41 GTCCTGCTCTGGGAGATCTTCACGCTGGGGGGCTCCCCGTA GTCCTGCTCTGGGAGATCTTCACACTGGGGGGCTCCCCGTA < 41bp 0.703945552498141 0.448168393339212 0.80494034 0.7692753 prediction 0.407891104996282 Functional Loss - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808306 chr4:1808309 nonsynonymous SNV 0.726 1 24 hm5C_associated_SNPs_95257 0 0 1 SUB1 POSTAR2 ENCODE chr4:1808282-1808345
64251 chr1 225974630 225974630 1 + G A UCEC 225974627 + 225974607 225974647 41 TGATCATAGCTCACTGCATCCTCGACCTCCTGGGCTCAAGC TGATCATAGCTCACTGCATCCTCAACCTCCTGGGCTCAAGC < 41bp 0.703941075669949 0.465062922029321 0.2716681 0.13983285 prediction 0.407882151339899 Functional Loss - SRP9 ENSG00000143742 CDS Human protein_coding chr1:225974627 chr1:225974630 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_95260 0 0 1 ILF3 POSTAR2 ENCODE chr1:225974629-225974688
64251 chr20 39984644 39984644 1 + G T UCEC 39984641 + 39984621 39984661 41 CCACCCTCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTC CCACCCTCCACTCCTACCTACAATAAGTCCCTCCGCCTCTC < 41bp 0.703938538350822 0.289284279077246 0.16576624 0.041140407 prediction 0.407877076701644 Functional Loss - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39984641 chr20:39984644 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95261 0 0 1 GRWD1 POSTAR2 ENCODE chr20:39984639-39984674
64251 chr7 6063167 6063167 1 + G A STAD 6063164 + 6063144 6063184 41 CTCTTGGGAAGAGCCCTTGGCTCGCTGGGAATGAACTCACC CTCTTGGGAAGAGCCCTTGGCTCACTGGGAATGAACTCACC < 41bp 0.703935302086565 0.461322078215627 0.16179967 0.14600947 prediction 0.407870604173129 Functional Loss - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063164 chr7:6063167 nonsynonymous SNV 0.848 0 24 hm5C_associated_SNPs_95265 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr7:6063144-6063176
64251 chr1 227921567 227921567 1 + C T rs201299891 227921565 + 227921545 227921585 41 GGCCTCCCAGTCCGTTCTGTCACCAGGCCCCTTCGGGTTCC GGCCTCCCAGTCCGTTCTGTCATCAGGCCCCTTCGGGTTCC < 41bp 0.703934587388525 0.472188987550329 0.1669414 0.13321465 prediction 0.40786917477705 Functional Loss - JMJD4;SNAP47 ENSG00000081692;ENSG00000143740 intronic Human other chr1:227921565 chr1:227921567 . . 0 23 hm5C_associated_SNPs_95267 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:227921560-227921580
64251 chr3 38180462 38180462 1 + G C LUAD 38180461 + 38180441 38180481 41 GCCTCTGTAGGCCGACTGCTCGAGCTGCTTACCAAGCTGGG GCCTCTGTAGGCCGACTGCTCCAGCTGCTTACCAAGCTGGG < 41bp 0.703934444908542 0.381150565620721 0.9012064 0.8881134 prediction 0.407868889817084 Functional Loss - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180461 chr3:38180462 nonsynonymous SNV 0.137 3 22 hm5C_associated_SNPs_95268 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:38180453-38180470
64251 chr4 3449273 3449273 1 + G A BLCA 3449270 + 3449250 3449290 41 GGCCAGCACTTCTTCAACCGCACGACGGACGTGACGCAGAC GGCCAGCACTTCTTCAACCGCACAACGGACGTGACGCAGAC < 41bp 0.825258056937498 0.62132379419824 0.138836 0.12176868 prediction 0.407868525478518 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3449270 chr4:3449273 synonymous SNV . 0 24 hm5C_associated_SNPs_95269 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr4:3449260-3449280
64251 chr19 12903536 12903536 1 + C T CESC 12903534 + 12903514 12903554 41 TGTCGAGTACCGCCGGCCTCCTCCGGGAGCAGGTGGCCCAG TGTCGAGTACCGCCGGCCTCCTTCGGGAGCAGGTGGCCCAG < 41bp 0.842501001531507 0.638571213992387 0.29267192 0.16817755 prediction 0.407859575078241 Functional Loss - JUNB ENSG00000171223 CDS Human protein_coding chr19:12903534 chr19:12903536 synonymous SNV . 0 23 hm5C_associated_SNPs_95272 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:12903520-12903571
64251 chr2 170885923 170885923 1 + G A LGG 170885920 + 170885900 170885940 41 ATTGACTCTGAGTATAATCCCTGGAGAAAGCTCACCCAGTT ATTGACTCTGAGTATAATCCCTGAAGAAAGCTCACCCAGTT < 41bp 0.770366162863946 0.566437405673624 0.23368785 0.046007246 prediction 0.407857514380645 Functional Loss - UBR3 ENSG00000144357 CDS Human protein_coding chr2:170885920 chr2:170885923 stopgain 1.000 1 24 hm5C_associated_SNPs_95274 0 0 2 SF3B4 POSTAR2 ENCODE chr2:170885857-170885933
64251 chr12 32761011 32761011 1 + G A LUAD 32761008 + 32760988 32761028 41 GGAAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAA GGAAATTGCCTCCTGATTCCCTGAACTGGAATGATGCTAAA < 41bp 0.782603125667343 0.578676533764953 0.27553797 0.15433925 prediction 0.407853183804781 Functional Loss - FGD4 ENSG00000139132 CDS Human protein_coding chr12:32761008 chr12:32761011 nonsynonymous SNV 0.883 4 24 hm5C_associated_SNPs_95276 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:32760989-32761021
64251 chr10 11911885 11911885 1 + C T COAD 11911883 + 11911863 11911903 41 AACATCATCGTCACCAACGGCGCGGCCCGGGAGCCCCGCAG AACATCATCGTCACCAACGGCGTGGCCCGGGAGCCCCGCAG < 41bp 0.820453385998182 0.61653365686867 0.45720142 0.2673382 prediction 0.407839458259023 Functional Loss - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11911883 chr10:11911885 nonsynonymous SNV 0.011 1 23 hm5C_associated_SNPs_95282 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:11911861-11911909
64251 chr6 44198386 44198386 1 + T C THCA 44198385 + 44198365 44198405 41 TTTTGACCATCATCTGTTACCTGGGCCTGCCCCGCCTGGTG TTTTGACCATCATCTGTTACCCGGGCCTGCCCCGCCTGGTG < 41bp 0.798755246987395 0.594835687520488 0.3839305 0.89520764 prediction 0.407839118933815 Functional Loss - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198385 chr6:44198386 nonsynonymous SNV 0.971 4 22 hm5C_associated_SNPs_95284 0 0 5 DDX24 POSTAR2 ENCODE chr6:44198357-44198399
64251 chr4 1388347 1388347 1 + C T UCEC 1388345 + 1388325 1388365 41 ATGTGGAGTGCCCGCCTGCTCACACGTGCCCATGTGGAGTG ATGTGGAGTGCCCGCCTGCTCATACGTGCCCATGTGGAGTG < 41bp 0.796411791769505 0.592493571914866 0.11175373 0.054960847 prediction 0.407836439709277 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388345 chr4:1388347 synonymous SNV . 0 23 hm5C_associated_SNPs_95285 0 0 2 DROSHA POSTAR2 ENCODE chr4:1388298-1388407
64251 chr6 26468723 26468723 1 + G A UCEC 26468720 + 26468700 26468740 41 CTCACAGGAGCCAATGGGGTCACGGTGCCTGAAGAGGGCCT CTCACAGGAGCCAATGGGGTCACAGTGCCTGAAGAGGGCCT < 41bp 0.816599319641204 0.612681714308085 0.2875862 0.24059471 prediction 0.407835210666238 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468720 chr6:26468723 synonymous SNV . 0 24 hm5C_associated_SNPs_95287 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr6:26468709-26468741
64251 chr6 42585019 42585019 1 + C T DLBC 42585017 + 42584997 42585037 41 GAGATTTTATGGAGGATGATCACGAGCGAGCAGTGTCGGTG GAGATTTTATGGAGGATGATCATGAGCGAGCAGTGTCGGTG < 41bp 0.703916655401451 0.419139022118057 0.47356516 0.5410136 prediction 0.407833310802902 Functional Loss - UBR2 ENSG00000024048 CDS Human protein_coding chr6:42585017 chr6:42585019 synonymous SNV . 0 23 hm5C_associated_SNPs_95288 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:42584984-42585022
64251 chr19 49841984 49841984 1 + C T COAD 49841982 + 49841962 49842002 41 CTGCTGCGGCTGGCACTACCCGCAGGACTGGTTCCAAGTCC CTGCTGCGGCTGGCACTACCCGTAGGACTGGTTCCAAGTCC < 41bp 0.851132363869828 0.64721829466088 0.3491762 0.4356206 prediction 0.407828138417896 Functional Loss - CD37 ENSG00000104894 CDS Human protein_coding chr19:49841982 chr19:49841984 stopgain 0.841 0 23 hm5C_associated_SNPs_95291 0 0 2 SF3B4 POSTAR2 ENCODE chr19:49841916-49841995
64251 chr2 132057270 132057270 1 + A C rs183711963 132057269 + 132057249 132057289 41 GTTGAAAGCGGTTGAGCAGGCAGGGCGCAGTGGCTCACGCC GTTGAAAGCGGTTGAGCAGGCCGGGCGCAGTGGCTCACGCC < 41bp 0.796523164058097 0.592611502089818 0.88932264 0.8967549 prediction 0.407823323936558 Functional Loss - LOC440910 ENSG00000231431;ENSG00000236516 ncRNA_exonic Human other chr2:132057269 chr2:132057270 . . 0 22 hm5C_associated_SNPs_95294 0 0 1 HNRNPM POSTAR2 ENCODE chr2:132057181-132057270
64251 chr17 40704700 40704700 1 - G A rs187157915 40704702 - 40704682 40704722 41 TACAAGCAGGTGTGGGTTCCCACGTGGGCACAGAGTGGCCC TACAAGCAGGTGTGGGTTCCCATGTGGGCACAGAGTGGCCC < 41bp 0.773049096301152 0.569140420341391 0.6464127 0.52559364 prediction 0.407817351919523 Functional Loss - LOC108783654 ENSG00000266962 ncRNA_exonic Human antisense chr17:40704702 chr17:40704700 . . 0 23 hm5C_associated_SNPs_95295 0 0 1 SLTM POSTAR2 ENCODE chr17:40704695-40704730
64251 chr1 110137452 110137452 1 + G A rs185552804 110137449 + 110137429 110137469 41 TTTGTATGTCTTAGTAGAGACGGGGTTTAACCGTGTTAGCC TTTGTATGTCTTAGTAGAGACGGAGTTTAACCGTGTTAGCC < 41bp 0.758970881082678 0.555063134244961 0.77040493 0.28775224 prediction 0.407815493675432 Functional Loss - GNAI3 ENSG00000065135 downstream Human protein_coding chr1:110137449 chr1:110137452 . . 0 24 hm5C_associated_SNPs_95297 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:110137428-110137459
64251 chr17 37901727 37901727 1 + G A SKCM 37901724 + 37901704 37901744 41 CATGGACTTCTCTGGCCATGCTGGGCGTGTCATTGAGAACC CATGGACTTCTCTGGCCATGCTGAGCGTGTCATTGAGAACC < 41bp 0.832807255883441 0.628901515813258 0.81643516 0.37097594 prediction 0.407811480140366 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37901724 chr17:37901727 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_95299 0 0 3 EFTUD2 POSTAR2 ENCODE chr17:37901714-37901780
64251 chr20 4680047 4680047 1 + C T SKCM 4680045 + 4680025 4680065 41 CGGTGGTGGCTGGGGGCAGCCTCATGGTGGTGGCTGGGGGC CGGTGGTGGCTGGGGGCAGCCTTATGGTGGTGGCTGGGGGC < 41bp 0.851609317855787 0.647707288433448 0.5171046 0.4288642 prediction 0.407804058844676 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680045 chr20:4680047 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_95303 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:4680018-4680047
64251 chr20 37570639 37570639 1 + A T STAD 37570637 + 37570617 37570657 41 ATGGACGTGTTCACAGACATCGACATCTTCAGAGACCTGCA ATGGACGTGTTCACAGACATCGTCATCTTCAGAGACCTGCA < 41bp 0.703900376031337 0.49270323979166 0.057079077 0.07463688 prediction 0.407800752062675 Functional Loss - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37570637 chr20:37570639 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_95304 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:37570632-37570659
64251 chr16 2579492 2579492 1 + C T rs142291569 2579489 + 2579469 2579509 41 GTCCCAGACTTCGTGGTGCTCGACGACTCCCTTCACGTCCA GTCCCAGACTTCGTGGTGCTCGATGACTCCCTTCACGTCCA < 41bp 0.712812742265869 0.508912782279635 0.15573755 0.090183794 prediction 0.407799919972469 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2579489 chr16:2579492 synonymous SNV . 0 24 hm5C_associated_SNPs_95305 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2579473-2579494
64251 chr14 56755250 56755250 1 + C T LUAD 56755247 + 56755227 56755267 41 GAAGCCCAGATCACACAGAGCACCATATCCAGGTTCGCCTG GAAGCCCAGATCACACAGAGCACTATATCCAGGTTCGCCTG < 41bp 0.782526635709061 0.578626815573563 0.031731308 0.06123191 prediction 0.407799640270996 Functional Loss - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56755247 chr14:56755250 synonymous SNV . 0 24 hm5C_associated_SNPs_95306 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr14:56755240-56755260
64251 chr19 18963017 18963017 1 + G T LIHC 18963013 + 18962993 18963033 41 AGGAGCCGCAGCATGTCCTCCTGCGGTACGAGGACGCCTAC AGGAGCCGCAGCATGTCCTCCTGCTGTACGAGGACGCCTAC < 41bp 0.703899149668916 0.492352561656252 0.5176657 0.33861202 prediction 0.407798299337832 Functional Loss - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18963013 chr19:18963017 nonsynonymous SNV 0.981 3 25 hm5C_associated_SNPs_95307 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:18963014-18963045
64251 chr9 96291814 96291814 1 + G A COAD 96291811 + 96291791 96291831 41 GTGCTGAGAGTGGCCGAGCACAGGCACAAGAAGGGGCTGAT GTGCTGAGAGTGGCCGAGCACAGACACAAGAAGGGGCTGAT < 41bp 0.703897075875836 0.462904903561061 0.44944802 0.25084943 prediction 0.407794151751671 Functional Loss - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96291811 chr9:96291814 synonymous SNV . 0 24 hm5C_associated_SNPs_95309 0 0 4 DDX24 POSTAR2 ENCODE chr9:96291743-96291869
64251 chr19 14030675 14030675 1 + C T SKCM 14030672 + 14030652 14030692 41 TGGAGGCCACCAAGCCCACCCAGCAGAGTCTGGTGGGTGTC TGGAGGCCACCAAGCCCACCCAGTAGAGTCTGGTGGGTGTC < 41bp 0.768519794221466 0.564629054885584 0.90653276 0.899352 prediction 0.407781478671764 Functional Loss - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14030672 chr19:14030675 stopgain 0.083 0 24 hm5C_associated_SNPs_95316 0 0 3 EFTUD2 POSTAR2 ENCODE chr19:14030652-14030694
64251 chr15 66607400 66607400 1 + G A LIHC 66607397 + 66607377 66607417 41 TAGTCAGTGACATCCTAATCCACGGGATGAAGGCTCGAAAC TAGTCAGTGACATCCTAATCCACAGGATGAAGGCTCGAAAC < 41bp 0.819504851115565 0.615614193500133 0.25482404 0.06609064 prediction 0.407781315230865 Functional Loss - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66607397 chr15:66607400 nonsynonymous SNV 0.644 4 24 hm5C_associated_SNPs_95317 0 0 1 GRWD1 POSTAR2 ENCODE chr15:66607376-66607421
64251 chr11 59523041 59523041 1 + G T rs201796338 59523038 + 59523018 59523058 41 GCTCACCTGGGACGCGCTCACCTGGGACGCGCTACCTGCCT GCTCACCTGGGACGCGCTCACCTTGGACGCGCTACCTGCCT < 41bp 0.703890390093391 0.429137182813772 0.91648304 0.78777504 prediction 0.407780780186781 Functional Loss - STX3 ENSG00000166900 UTR5 Human protein_coding chr11:59523038 chr11:59523041 . . 0 24 hm5C_associated_SNPs_95318 0 0 6 DDX3X POSTAR2 ENCODE chr11:59522972-59523109
64251 chr2 241531496 241531496 1 + G T UCEC 241531494 + 241531474 241531514 41 AGGCCAGGCCGCTGGGAGCACAGGACTTGTCGGCAGCTGCT AGGCCAGGCCGCTGGGAGCACATGACTTGTCGGCAGCTGCT < 41bp 0.914526422037 0.710638254999009 0.47494695 0.32199225 prediction 0.407776334075983 Functional Loss - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241531494 chr2:241531496 nonsynonymous SNV 0.734 2 23 hm5C_associated_SNPs_95321 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr2:241531488-241531512
64251 chr19 4498335 4498335 1 + C T LUSC 4498332 + 4498312 4498352 41 TGGAGGAGAAGCTGCAGAAGCTGCACAGTGAGATCAAGTTT TGGAGGAGAAGCTGCAGAAGCTGTACAGTGAGATCAAGTTT < 41bp 0.756940086684606 0.553052375836701 0.026769787 0.031067938 prediction 0.40777542169581 Functional Loss - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4498332 chr19:4498335 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95322 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:4498335-4498336
64251 chr17 72436273 72436273 1 + C T UCEC 72436270 + 72436250 72436290 41 ACTTCTCCACCTGTGCCTCTCGGCGCTTCCTCTTTGGGGTT ACTTCTCCACCTGTGCCTCTCGGTGCTTCCTCTTTGGGGTT < 41bp 0.711962671247366 0.508079939745338 0.92275286 0.38525933 prediction 0.407765463004056 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436270 chr17:72436273 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_95326 0 0 1 RBM15 POSTAR2 ENCODE chr17:72436271-72436355
64251 chr19 918593 918593 1 + C T BRCA 918590 + 918570 918610 41 TTCCTCCTGTGCTGCGTCCCCTTCACGGCCCTGCTGTACCC TTCCTCCTGTGCTGCGTCCCCTTTACGGCCCTGCTGTACCC < 41bp 0.735867109104404 0.531984408959806 0.065353006 0.054359943 prediction 0.407765400289195 Functional Loss - KISS1R ENSG00000116014 CDS Human protein_coding chr19:918590 chr19:918593 synonymous SNV . 0 24 hm5C_associated_SNPs_95327 0 0 1 DROSHA POSTAR2 ENCODE chr19:918580-918607
64251 chr16 2284337 2284337 1 + C T BRCA 2284335 + 2284315 2284355 41 CGTGGCCACCGGCGCGTCCACTCAGACGAGCGGCCCTACCC CGTGGCCACCGGCGCGTCCACTTAGACGAGCGGCCCTACCC < 41bp 0.703880000100377 0.426989035675688 0.065760374 0.10142714 prediction 0.407760000200754 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284335 chr16:2284337 nonsynonymous SNV 0.973 4 23 hm5C_associated_SNPs_95331 0 0 3 EIF3D POSTAR2 ENCODE chr16:2284261-2284381
64251 chr16 2284339 2284339 1 + G C LUSC 2284335 + 2284315 2284355 41 CGTGGCCACCGGCGCGTCCACTCAGACGAGCGGCCCTACCC CGTGGCCACCGGCGCGTCCACTCACACGAGCGGCCCTACCC < 41bp 0.703880000100377 0.408283847792832 0.065760374 0.05440709 prediction 0.407760000200754 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284335 chr16:2284339 nonsynonymous SNV 0.955 4 25 hm5C_associated_SNPs_95332 0 0 3 EIF3D POSTAR2 ENCODE chr16:2284261-2284381
64251 chr9 38395947 38395947 1 + G A LGG 38395944 + 38395924 38395964 41 CCACCGGGGAGGTCATTGGGCACGTGGCTGAAGGTGACCGG CCACCGGGGAGGTCATTGGGCACATGGCTGAAGGTGACCGG < 41bp 0.811231904668351 0.607354173261544 0.24854171 0.1613704 prediction 0.407755462813614 Functional Loss - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38395944 chr9:38395947 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_95333 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:38395947-38395971
64251 chr14 24035016 24035016 1 + C T rs77436356 24035014 + 24034994 24035034 41 AGGCCCAGGGCCTGCCCCTTCACCAGCCCACCTTTCGGAAG AGGCCCAGGGCCTGCCCCTTCATCAGCCCACCTTTCGGAAG < 41bp 0.815578928972724 0.611701661659738 0.114031464 0.1090529 prediction 0.407754534625971 Functional Loss - LOC102724814 ENSG00000258727 ncRNA_exonic Human antisense chr14:24035014 chr14:24035016 . . 0 23 hm5C_associated_SNPs_95335 0 1 2 TARDBP POSTAR2 DRA001158,DRS012386 chr14:24035012-24035040
64251 chr11 43513629 43513629 1 + C T UCEC 43513626 + 43513606 43513646 41 AATGCCAAGCTCTGGAATGACGCCGTCATAGTAGCCACCAT AATGCCAAGCTCTGGAATGACGCTGTCATAGTAGCCACCAT < 41bp 0.783250851177297 0.579376187586955 0.18114612 0.103086054 prediction 0.407749327180683 Functional Loss - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43513626 chr11:43513629 synonymous SNV . 0 24 hm5C_associated_SNPs_95339 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:43513624-43513647
64251 chr15 68118759 68118759 1 + C T COAD 68118756 + 68118736 68118776 41 CTCGCGTGGTAGCTTCATCCCTGCGCGTTACAACAGCTCTC CTCGCGTGGTAGCTTCATCCCTGTGCGTTACAACAGCTCTC < 41bp 0.736881181053553 0.533012108665662 0.20026556 0.28485405 prediction 0.407738144775783 Functional Loss - SKOR1 ENSG00000188779 CDS Human protein_coding chr15:68118756 chr15:68118759 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_95341 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:68118747-68118771
64251 chr12 51203362 51203362 1 + C T SARC 51203359 + 51203339 51203379 41 ACTCCCATCTATCAGACTAGCAGCGGACAGTACAGTATGTA ACTCCCATCTATCAGACTAGCAGTGGACAGTACAGTATGTA < 41bp 0.708907798084364 0.505044130212516 0.53751785 0.2455875 prediction 0.407727335743695 Functional Loss - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51203359 chr12:51203362 synonymous SNV . 0 24 hm5C_associated_SNPs_95352 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:51203333-51203367
64251 chr5 140475022 140475022 1 + G T KIRC 140475018 + 140474998 140475038 41 TGAGATCAGGTTAACCCTCACAGCGCTAGATGGCGGGAGTC TGAGATCAGGTTAACCCTCACAGCTCTAGATGGCGGGAGTC < 41bp 0.711416561101339 0.507554616438759 0.79507303 0.480234 prediction 0.40772388932516 Functional Loss - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475018 chr5:140475022 synonymous SNV . 0 25 hm5C_associated_SNPs_95355 0 0 1 SND1 POSTAR2 ENCODE chr5:140475016-140475062
64251 chr3 38307699 38307699 1 + T C UCEC 38307698 + 38307678 38307718 41 TGATATGGGCTGGGAATATCCTGAGAACAGGCTCCCATCCC TGATATGGGCTGGGAATATCCCGAGAACAGGCTCCCATCCC < 41bp 0.772843526897352 0.568984124278453 0.19701546 0.3847508 prediction 0.407718805237799 Functional Loss - SLC22A13 ENSG00000172940 CDS Human protein_coding chr3:38307698 chr3:38307699 synonymous SNV . 0 22 hm5C_associated_SNPs_95358 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:38307679-38307700
64251 chr13 103518104 103518104 1 + G T THYM 103518100 + 103518080 103518120 41 CTTCCAAACCTCCCTCAGAACAAGGCGAAGAGGAACTGGTA CTTCCAAACCTCCCTCAGAACAAGTCGAAGAGGAACTGGTA < 41bp 0.703895932214645 0.500037936302465 0.7837316 0.20537686 prediction 0.407715991824359 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103518100 chr13:103518104 nonsynonymous SNV 0.397 0 25 hm5C_associated_SNPs_95359 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:103518101-103518130
64251 chr20 31413756 31413756 1 + C T UCEC 31413753 + 31413733 31413773 41 GATGGCAGTGAACGTATACTCAACGTCAGTGACCAGTGATA GATGGCAGTGAACGTATACTCAATGTCAGTGACCAGTGATA < 41bp 0.726542395573554 0.522686045749024 0.21118256 0.12588537 prediction 0.40771269964906 Functional Loss - MAPRE1 ENSG00000101367 CDS Human protein_coding chr20:31413753 chr20:31413756 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_95362 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:31413740-31413760
64251 chr2 179444687 179444687 1 + G A PAAD 179444684 + 179444664 179444704 41 ACGGGAAGCTTTGACAGCATCACGAGTTTCACCGGGATCAC ACGGGAAGCTTTGACAGCATCACAAGTTTCACCGGGATCAC < 41bp 0.784580524995632 0.580724955227768 0.1698856 0.092195064 prediction 0.407711139535729 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179444684 chr2:179444687 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_95363 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:179444682-179444703
64251 chr15 25339118 25339118 1 + G A LUSC 25339115 + 25339095 25339135 41 TCAGGTGCTGGTGGATCCCTCAGGATGGTAAATGTCCATTT TCAGGTGCTGGTGGATCCCTCAGAATGGTAAATGTCCATTT < 41bp 0.80736854715126 0.603514657689565 0.90534306 0.63717735 prediction 0.407707778923389 Functional Loss - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25339115 chr15:25339118 . . 0 24 hm5C_associated_SNPs_95366 0 0 4 GRWD1 POSTAR2 ENCODE chr15:25339013-25339133
64251 chr4 41266155 41266155 1 + A T LIHC 41266151 + 41266131 41266171 41 CCTTTTCCGGTGAACCATGGCGCCAGTTCAGAGGACACCCT CCTTTTCCGGTGAACCATGGCGCCTGTTCAGAGGACACCCT < 41bp 0.703853224818199 0.359361925442869 0.2050257 0.07567632 prediction 0.407706449636397 Functional Loss - UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41266151 chr4:41266155 nonsynonymous SNV 0.932 2 25 hm5C_associated_SNPs_95367 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:41266092-41266170
64251 chr19 39423117 39423117 1 + C T STAD 39423115 + 39423095 39423135 41 CTGAAGGGTGTGGTCCTGTGCACGTTTACCCGCAAGCCGAA CTGAAGGGTGTGGTCCTGTGCATGTTTACCCGCAAGCCGAA < 41bp 0.835587847812517 0.631736079920441 0.09343338 0.066563904 prediction 0.407703535784152 Functional Loss - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423115 chr19:39423117 nonsynonymous SNV 0.927 4 23 hm5C_associated_SNPs_95369 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:39423097-39423118
64251 chr22 35726376 35726376 1 + G A rs35352978 35726373 + 35726353 35726393 41 CGTGCCGAGCCATGCAGCAGCGGGTCCTGGAGCTCATCCCT CGTGCCGAGCCATGCAGCAGCGGATCCTGGAGCTCATCCCT < 41bp 0.703851539981297 0.448352289161682 0.18572581 0.25670946 prediction 0.407703079962594 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35726373 chr22:35726376 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_95371 0 0 1 PPIG POSTAR2 ENCODE chr22:35726339-35726382
64251 chr10 35896892 35896892 1 + A C rs35613011 35896888 + 35896868 35896908 41 TACATCATCCACCTCCTCCTCCGGACCCTGCTGGAGGCAGC TACATCATCCACCTCCTCCTCCGGCCCCTGCTGGAGGCAGC < 41bp 0.703848500589648 0.30461133335402 0.72452426 0.77759516 prediction 0.407697001179296 Functional Loss - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35896888 chr10:35896892 nonsynonymous SNV 0.001 4 25 hm5C_associated_SNPs_95374 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:35896866-35896896
64251 chr10 35896891 35896891 1 + G A COAD 35896888 + 35896868 35896908 41 TACATCATCCACCTCCTCCTCCGGACCCTGCTGGAGGCAGC TACATCATCCACCTCCTCCTCCGAACCCTGCTGGAGGCAGC < 41bp 0.703848500589648 0.450977767704624 0.72452426 0.7693832 prediction 0.407697001179296 Functional Loss - GJD4 ENSG00000177291 CDS Human protein_coding chr10:35896888 chr10:35896891 synonymous SNV . 0 24 hm5C_associated_SNPs_95375 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:35896866-35896896
64251 chr16 2757372 2757372 1 + G T LUAD 2757369 + 2757349 2757389 41 GAAGAAATGATTTACGTTTTCCCGAGATGTAATGAACTGCC GAAGAAATGATTTACGTTTTCCCTAGATGTAATGAACTGCC < 41bp 0.703846228058331 0.32380133838493 0.08538291 0.05977246 prediction 0.407692456116663 Functional Loss - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2757369 chr16:2757372 synonymous SNV . 0 24 hm5C_associated_SNPs_95378 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:2757299-2757389
64251 chrX 73745699 73745699 1 + A T STAD 73745695 + 73745675 73745715 41 GTGTCAGGCCACATCAGTGACTCCATCCCTGGACTTAAGAA GTGTCAGGCCACATCAGTGACTCCTTCCCTGGACTTAAGAA < 41bp 0.703845799666895 0.330940082595889 0.95707834 0.10508564 prediction 0.407691599333789 Functional Loss - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73745695 chrX:73745699 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_95379 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:73745672-73745710
64251 chr12 31820774 31820774 1 + A T STAD 31820770 + 31820750 31820790 41 GTGCTTCTGGACCTATAGAACTCGAGTACTGATTGGTGACC GTGCTTCTGGACCTATAGAACTCGTGTACTGATTGGTGACC < 41bp 0.909150110652554 0.705310626910658 0.09470311 0.09640783 prediction 0.407678967483793 Functional Loss - ETFBKMT ENSG00000139160 CDS Human protein_coding chr12:31820770 chr12:31820774 synonymous SNV . 0 25 hm5C_associated_SNPs_95384 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:31820765-31820800
64251 chr11 94801081 94801081 1 + G T HNSC 94801077 + 94801057 94801097 41 CCTCCAAATCGAGCTCTGCGCGACGATCCAAGTCCTCCTCG CCTCCAAATCGAGCTCTGCGCGACTATCCAAGTCCTCCTCG < 41bp 0.745031114506119 0.541192555082276 0.13175151 0.019945443 prediction 0.407677118847685 Functional Loss - SRSF8 ENSG00000271885 CDS Human other chr11:94801077 chr11:94801081 unknown 0.002 0 25 hm5C_associated_SNPs_95385 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:94801054-94801081
64251 chr17 42254138 42254138 1 - C A rs141744178 42254142 - 42254122 42254162 41 CTCTCGCCTGCTGCCAGGTTCACCGTCGCTCCTGCTTCCAG CTCTCGCCTGCTGCCAGGTTCACCTTCGCTCCTGCTTCCAG < 41bp 0.703838045850692 0.497631085032693 0.030994058 0.011423349 prediction 0.407676091701384 Functional Loss - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254142 chr17:42254138 nonsynonymous SNV 0.061 0 25 hm5C_associated_SNPs_95386 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:42254117-42254141
64251 chrX 117959676 117959676 1 + C T SKCM 117959673 + 117959653 117959693 41 TGATCCGTTTAGAGGTGCAGCTCCAGAACGCTATTCAGGCA TGATCCGTTTAGAGGTGCAGCTCTAGAACGCTATTCAGGCA < 41bp 0.79310750440966 0.589269796752011 0.90671253 0.8058348 prediction 0.407675415315298 Functional Loss - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117959673 chrX:117959676 stopgain 0.997 0 24 hm5C_associated_SNPs_95387 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:117959660-117959696
64251 chr17 2283775 2283775 1 + A C rs58616245 2283774 + 2283754 2283794 41 ACTGCGGGAGGCAGGGGATGCATGGGTGTCCCCATCTGTCC ACTGCGGGAGGCAGGGGATGCCTGGGTGTCCCCATCTGTCC < 41bp 0.841803725604494 0.637967645700776 0.9051788 0.82021 prediction 0.407672159807436 Functional Loss - SGSM2 ENSG00000141258 UTR3 Human protein_coding chr17:2283774 chr17:2283775 . . 0 22 hm5C_associated_SNPs_95388 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:2283775-2283797
64251 chr19 830878 830878 1 + G A SKCM 830875 + 830855 830895 41 GTCAACGTGACTGTGACCCCCGAGGACCAGTGTCGCCCCAA GTCAACGTGACTGTGACCCCCGAAGACCAGTGTCGCCCCAA < 41bp 0.829914917776602 0.626079145950412 0.8129542 0.48233917 prediction 0.40767154365238 Functional Loss - AZU1 ENSG00000172232 CDS Human protein_coding chr19:830875 chr19:830878 synonymous SNV . 0 24 hm5C_associated_SNPs_95390 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:830857-830893
64251 chr16 85839182 85839182 1 + C T rs149364130 85839180 + 85839160 85839200 41 CCTGCGTGGGCACGTGTGTGCACGTACGTGCGTGAACATGA CCTGCGTGGGCACGTGTGTGCATGTACGTGCGTGAACATGA < 41bp 0.802697860036512 0.598864280977418 0.087967545 0.13397926 prediction 0.407667158118189 Functional Loss - COX4I1 ENSG00000131143 intronic Human protein_coding chr16:85839180 chr16:85839182 . . 0 23 hm5C_associated_SNPs_95393 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:85839180-85839200
64251 chr13 100635129 100635129 1 + A C SKCM 100635125 + 100635105 100635145 41 CCCGAGCAACTGAGCAATCCCAAGAAGAGCTGCAACAAAAC CCCGAGCAACTGAGCAATCCCAAGCAGAGCTGCAACAAAAC < 41bp 0.703832944356126 0.291857023573595 0.8769625 0.55943775 prediction 0.407665888712252 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100635125 chr13:100635129 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_95394 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:100635074-100635131
64251 chr17 4927256 4927256 1 + G A rs201887996 4927253 + 4927233 4927273 41 CCTGGATGGAGGGGGCCGATCCCGGGGAGCGGGTTCTGCAC CCTGGATGGAGGGGGCCGATCCCAGGGAGCGGGTTCTGCAC < 41bp 0.838313153954748 0.634486561724832 0.93798655 0.9119346 prediction 0.407653184459832 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4927253 chr17:4927256 nonsynonymous SNV 0.920 0 24 hm5C_associated_SNPs_95397 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:4927226-4927262
64251 chr19 47879354 47879354 1 + G T SARC 47879352 + 47879332 47879372 41 GCAGCCGAAAGGACTCAGACCAGGTGGGGCCTGTTCTGCCC GCAGCCGAAAGGACTCAGACCATGTGGGGCCTGTTCTGCCC < 41bp 0.703825979388394 0.343891192524537 0.8892141 0.38708806 prediction 0.407651958776789 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47879352 chr19:47879354 nonsynonymous SNV 0.901 4 23 hm5C_associated_SNPs_95399 0 0 1 PRPF8 POSTAR2 ENCODE chr19:47879354-47879386
64251 chr1 203013528 203013528 1 + G T SARC 203013526 + 203013506 203013546 41 GGTGCGAGAGCGGCTCCGGGCAGCGCTGGAGCGAGTCACCA GGTGCGAGAGCGGCTCCGGGCATCGCTGGAGCGAGTCACCA < 41bp 0.703815298352487 0.334739716156214 0.8959848 0.4993749 prediction 0.407630596704973 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203013526 chr1:203013528 nonsynonymous SNV 0.703 0 23 hm5C_associated_SNPs_95409 0 0 2 BUD13 POSTAR2 ENCODE chr1:203013500-203013538
64251 chr1 203013529 203013529 1 + C T UCEC 203013526 + 203013506 203013546 41 GGTGCGAGAGCGGCTCCGGGCAGCGCTGGAGCGAGTCACCA GGTGCGAGAGCGGCTCCGGGCAGTGCTGGAGCGAGTCACCA < 41bp 0.703815298352487 0.495876878546908 0.8959848 0.8643495 prediction 0.407630596704973 Functional Loss - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203013526 chr1:203013529 nonsynonymous SNV 0.545 2 24 hm5C_associated_SNPs_95410 0 0 2 BUD13 POSTAR2 ENCODE chr1:203013500-203013538
64251 chr19 39219727 39219727 1 + G A COAD 39219724 + 39219704 39219744 41 AGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGG AGCCTTCATCGACTTCATGTCGCAGGAGACCACCGACACGG < 41bp 0.82133649244884 0.617522270034143 0.9100625 0.49542946 prediction 0.407628444829394 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39219724 chr19:39219727 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_95411 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39219701-39219787
64251 chr7 5270545 5270545 1 + C T UCEC 5270542 + 5270522 5270562 41 GCCCTGCGCCTGGATGAGGACAGCGAGCACCCGCCCATGAT GCCCTGCGCCTGGATGAGGACAGTGAGCACCCGCCCATGAT < 41bp 0.712654320427392 0.50884490053747 0.4547303 0.6690014 prediction 0.407618839779844 Functional Loss - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5270542 chr7:5270545 synonymous SNV . 0 24 hm5C_associated_SNPs_95416 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:5270502-5270554
64251 chr1 11897194 11897194 1 + C T UCEC 11897191 + 11897171 11897211 41 CAGCCGAGAAGGAGGACCTCCTGCAGCAGATGCTGGAAAGG CAGCCGAGAAGGAGGACCTCCTGTAGCAGATGCTGGAAAGG < 41bp 0.703800161809992 0.47260246174627 0.66639364 0.38652658 prediction 0.407600323619984 Functional Loss - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897191 chr1:11897194 stopgain 0.998 1 24 hm5C_associated_SNPs_95423 0 0 6 BUD13 POSTAR2 ENCODE chr1:11897147-11897227
64251 chr7 74004251 74004251 1 + A T LUAD 74004247 + 74004227 74004267 41 CAGGTGAAGGAACTCTTCAACGAGAAATACGGTCAGTGCCT CAGGTGAAGGAACTCTTCAACGAGTAATACGGTCAGTGCCT < 41bp 0.703797549859806 0.375134161674362 0.91634315 0.9009879 prediction 0.407595099719613 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:74004247 chr7:74004251 stopgain 1.000 1 25 hm5C_associated_SNPs_95427 0 0 5 DDX24 POSTAR2 ENCODE chr7:74004182-74004252
64251 chrX 117528104 117528104 1 + G A SKCM 117528101 + 117528081 117528121 41 TTAAGGATTCTCAGCCTTCTCTTGATTTGGCAAGTGCTACC TTAAGGATTCTCAGCCTTCTCTTAATTTGGCAAGTGCTACC < 41bp 0.806432482750891 0.602634977990497 0.049406976 0.06806058 prediction 0.407595009520787 Functional Loss - WDR44 ENSG00000131725 CDS Human protein_coding chrX:117528101 chrX:117528104 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_95428 0 0 1 ZNF622 POSTAR2 ENCODE chrX:117528075-117528147
64251 chr2 74329082 74329082 1 + C T STAD 74329080 + 74329060 74329100 41 GCTGGCGGAGAGGGCACGGGCACGGCAGGAGGAGGCTGCCC GCTGGCGGAGAGGGCACGGGCATGGCAGGAGGAGGCTGCCC < 41bp 0.806981155620294 0.603183805221619 0.69062567 0.7785399 prediction 0.407594700797349 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74329080 chr2:74329082 nonsynonymous SNV 0.152 2 23 hm5C_associated_SNPs_95429 0 0 1 EIF3H POSTAR2 ENCODE chr2:74329053-74329098
64251 chr20 2636749 2636749 1 + G A rs140275178 2636746 + 2636726 2636766 41 CCCACTGCTTGTTGGGGGATCACGGTGATGGCTGACCAGGG CCCACTGCTTGTTGGGGGATCACAGTGATGGCTGACCAGGG < 41bp 0.802538171837985 0.598741606196621 0.8276502 0.42162037 prediction 0.407593131282727 Functional Loss - SNORD86 ENSG00000212498 ncRNA_exonic Human snoRNA chr20:2636746 chr20:2636749 . . 0 24 hm5C_associated_SNPs_95432 0 0 45 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:2636740-2636760
64251 chr17 20224751 20224751 1 + C T rs370266367 20224749 + 20224729 20224769 41 GACCAGTGGTACTTGGGCTACCCGGGGGACCAGTGGTCCTC GACCAGTGGTACTTGGGCTACCTGGGGGACCAGTGGTCCTC < 41bp 0.703790689401573 0.482200520604908 0.8676672 0.8710019 prediction 0.407581378803145 Functional Loss - CCDC144CP ENSG00000154898 ncRNA_exonic Human transcribed_processed_pseudogene chr17:20224749 chr17:20224751 . . 0 23 hm5C_associated_SNPs_95436 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:20224740-20224760
64251 chr11 6503417 6503417 1 + C T CESC 6503414 + 6503394 6503434 41 CTCGGCTGTGCCAGGCGTTGCTGCTGAACAGCCTGGGGTCT CTCGGCTGTGCCAGGCGTTGCTGTTGAACAGCCTGGGGTCT < 41bp 0.7186111444272 0.514822312354813 0.50469637 0.56364 prediction 0.407577664144773 Functional Loss - TIMM10B ENSG00000132286;ENSG00000265264 CDS Human other chr11:6503414 chr11:6503417 nonsynonymous SNV 0.513 0 24 hm5C_associated_SNPs_95438 0 0 5 GEMIN5 POSTAR2 ENCODE chr11:6503382-6503427
64251 chr9 139562801 139562801 1 + G A rs200494855 139562798 + 139562778 139562818 41 TGGCAGTGGGCGGCACAGAGCACGCCTACCGGCCCGGGTGA TGGCAGTGGGCGGCACAGAGCACACCTACCGGCCCGGGTGA < 41bp 0.703782311338628 0.43978663749813 0.42618793 0.05374199 prediction 0.407564622677257 Functional Loss - EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139562798 chr9:139562801 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_95440 0 0 5 AARS POSTAR2 ENCODE chr9:139562757-139562806
64251 chr3 112300023 112300023 1 + C T BLCA 112300020 + 112300000 112300040 41 GTGTCTGTCCTGGTCTTTGACTTCAGGCCCTCCCTGGAATT GTGTCTGTCCTGGTCTTTGACTTTAGGCCCTCCCTGGAATT < 41bp 0.707482561228357 0.503706149018725 0.08030075 0.07481569 prediction 0.407552824419263 Functional Loss - SLC35A5 ENSG00000138459 CDS Human protein_coding chr3:112300020 chr3:112300023 synonymous SNV . 0 24 hm5C_associated_SNPs_95446 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:112300012-112300035
64251 chr11 65388396 65388396 1 + C T COAD 65388393 + 65388373 65388413 41 TGCAGCCGAGGCCTGTGGTTCTGCAGGGCATGCAGGTGCGC TGCAGCCGAGGCCTGTGGTTCTGTAGGGCATGCAGGTGCGC < 41bp 0.748244503563739 0.544472197258917 0.29303288 0.24264047 prediction 0.407544612609645 Functional Loss - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65388393 chr11:65388396 stopgain 0.994 0 24 hm5C_associated_SNPs_95448 0 0 2 DDX24 POSTAR2 ENCODE chr11:65388301-65388416
64251 chr7 8126118 8126118 1 + G A HNSC 8126115 + 8126095 8126135 41 CCCAGCAGCAGCAGCTCCTGCAGGAACTGCAGGGTGAGGAC CCCAGCAGCAGCAGCTCCTGCAGAAACTGCAGGGTGAGGAC < 41bp 0.802827348064174 0.599058285893354 0.88948905 0.64393616 prediction 0.407538124341638 Functional Loss - GLCCI1 ENSG00000106415 CDS Human protein_coding chr7:8126115 chr7:8126118 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_95452 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:8126072-8126118
64251 chr3 50609146 50609146 1 + G T UCEC 50609144 + 50609124 50609164 41 ATTCTCTGTGGGGACAGTTTCAGAGCCTGAGGCCGGCACTT ATTCTCTGTGGGGACAGTTTCATAGCCTGAGGCCGGCACTT < 41bp 0.703768457918346 0.334860141636522 0.93049574 0.5419486 prediction 0.407536915836692 Functional Loss - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50609144 chr3:50609146 stopgain 1.000 0 23 hm5C_associated_SNPs_95453 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50609127-50609163
64251 chr19 16612032 16612032 1 + G A rs141306136 16612029 + 16612009 16612049 41 TCTGGGGGTGCACTCGAACTCGCGTCCCAGAACACAGACAA TCTGGGGGTGCACTCGAACTCGCATCCCAGAACACAGACAA < 41bp 0.799291371496779 0.595523210203666 0.33135295 0.20268083 prediction 0.407536322586227 Functional Loss - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16612029 chr19:16612032 synonymous SNV . 0 24 hm5C_associated_SNPs_95454 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:16611995-16612045
64251 chr16 89632725 89632725 1 + G T rs12932628 89632722 + 89632702 89632742 41 TCGGGGATAGTCTCAGGAGGCACGAGTCGCCTGCCTCGGTG TCGGGGATAGTCTCAGGAGGCACTAGTCGCCTGCCTCGGTG < 41bp 0.896648482483624 0.692882145571539 0.4700086 0.36258247 prediction 0.40753267382417 Functional Loss - RPL13 ENSG00000167526;ENSG00000178773 intergenic Human other chr16:89632722 chr16:89632725 . . 0 24 hm5C_associated_SNPs_95455 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:89632702-89632800
64251 chr1 229771033 229771033 1 + C T rs138523014 229771030 + 229771010 229771050 41 GGACGCAGGCTGGCCAGGGCCAGCTGAGGCAGGTGCTGAGC GGACGCAGGCTGGCCAGGGCCAGTTGAGGCAGGTGCTGAGC < 41bp 0.724871882311524 0.52110642918473 0.90921754 0.8743799 prediction 0.407530906253589 Functional Loss - URB2 ENSG00000135763 CDS Human protein_coding chr1:229771030 chr1:229771033 synonymous SNV . 0 24 hm5C_associated_SNPs_95456 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:229771014-229771043
64251 chr4 74735480 74735480 1 + C T PRAD 74735477 + 74735457 74735497 41 CAAAGTGTGAACGTGAAGTCCCCCGGACCCCACTGCGCCCA CAAAGTGTGAACGTGAAGTCCCCTGGACCCCACTGCGCCCA < 41bp 0.725109211996143 0.521344902318274 0.18186694 0.15303105 prediction 0.407528619355736 Functional Loss - CXCL1 ENSG00000163739 CDS Human protein_coding chr4:74735477 chr4:74735480 synonymous SNV . 0 24 hm5C_associated_SNPs_95458 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:74735457-74735487
64251 chr12 123889487 123889487 1 + G A LGG 123889484 + 123889464 123889504 41 ATTGCCACCAAGCAGTTCTCCCGGGGTGACTTTGTGGTGGA ATTGCCACCAAGCAGTTCTCCCGAGGTGACTTTGTGGTGGA < 41bp 0.808498054998112 0.604735724654461 0.94207144 0.90617526 prediction 0.407524660687301 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123889484 chr12:123889487 synonymous SNV . 0 24 hm5C_associated_SNPs_95460 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:123889450-123889491
64251 chr16 30991437 30991437 1 + C T STAD 30991434 + 30991414 30991454 41 ACTCAGAGGACATGAGTTACCTGCGGCTTACGTACGAGCGG ACTCAGAGGACATGAGTTACCTGTGGCTTACGTACGAGCGG < 41bp 0.749145509623083 0.545385043662133 0.79473996 0.5117349 prediction 0.407520931921901 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30991434 chr16:30991437 nonsynonymous SNV 0.989 5 24 hm5C_associated_SNPs_95461 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:30991361-30991442
64251 chr6 52530142 52530142 1 + C T UCEC 52530139 + 52530119 52530159 41 TGAAGAGGTCGTGGACCATCCCCCAAAATGAATCCCAACAC TGAAGAGGTCGTGGACCATCCCCTAAAATGAATCCCAACAC < 41bp 0.703755504794929 0.483746747066337 0.10849911 0.11597112 prediction 0.407511009589859 Functional Loss - LOC730101 ENSG00000216775 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:52530139 chr6:52530142 . . 0 24 hm5C_associated_SNPs_95464 0 0 2 GRWD1 POSTAR2 ENCODE chr6:52530120-52530177
64251 chr4 59432 59432 1 + G T LUSC 59430 + 59410 59450 41 GATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGG GATGTGATGTTGGAGAACTACATGAACCTGGTCTCCCTGGG < 41bp 0.914317249689804 0.710568911006189 0.654413 0.2199519 prediction 0.407496677367229 Functional Loss - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59430 chr4:59432 nonsynonymous SNV 0.612 3 23 hm5C_associated_SNPs_95473 0 0 7 GEMIN5 POSTAR2 ENCODE chr4:59400-59451
64251 chr1 84948637 84948637 1 + C T CESC 84948634 + 84948614 84948654 41 TACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACC TACCCAAGACCATTGACAACCAGTGAGTGTATGATGAAACC < 41bp 0.760036141865135 0.556295130819639 0.18479714 0.05372113 prediction 0.407482022090992 Functional Loss - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84948634 chr1:84948637 stopgain 0.999 1 24 hm5C_associated_SNPs_95480 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:84948606-84948666
64251 chr1 64936601 64936601 1 + G A UCEC 64936598 + 64936578 64936618 41 CAGATGCGGAGGCTGGCGGCCGAGGAGCTGGGGGTCGTCAC CAGATGCGGAGGCTGGCGGCCGAAGAGCTGGGGGTCGTCAC < 41bp 0.802028061414958 0.598287431508214 0.91593087 0.8988188 prediction 0.407481259813487 Functional Loss - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:64936598 chr1:64936601 synonymous SNV . 0 24 hm5C_associated_SNPs_95481 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:64936586-64936614
64251 chr19 18092698 18092698 1 + G T LUSC 18092694 + 18092674 18092714 41 CCCTCGGTGGCCGAGGCCGACGTGGACGTGCTGCTGTCCAT CCCTCGGTGGCCGAGGCCGACGTGTACGTGCTGCTGTCCAT < 41bp 0.70763440763294 0.503897525302265 0.7468193 0.37864685 prediction 0.407473764661351 Functional Loss - KCNN1 ENSG00000105642 CDS Human protein_coding chr19:18092694 chr19:18092698 nonsynonymous SNV 0.881 1 25 hm5C_associated_SNPs_95485 0 0 1 YBX3 POSTAR2 ENCODE chr19:18092690-18092778
64251 chrX 153664162 153664162 1 + G T LUSC 153664159 + 153664139 153664179 41 ATCTTCACCTATGGCCTGCACATGATCCTCAGCCTCAAGAC ATCTTCACCTATGGCCTGCACATTATCCTCAGCCTCAAGAC < 41bp 0.703735498354077 0.295807800739867 0.044924527 0.025409102 prediction 0.407470996708154 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153664159 chrX:153664162 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_95486 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153664114-153664162
64251 chrX 37545418 37545418 1 + C T SKCM 37545416 + 37545396 37545436 41 ACCTCAGCCGCGACCGCCCGCTCGTACTGCTGCTGCACCTG ACCTCAGCCGCGACCGCCCGCTTGTACTGCTGCTGCACCTG < 41bp 0.703734118853659 0.448544224400845 0.055947453 0.029230416 prediction 0.407468237707319 Functional Loss - XK ENSG00000047597 CDS Human protein_coding chrX:37545416 chrX:37545418 synonymous SNV . 0 23 hm5C_associated_SNPs_95489 0 0 3 GEMIN5 POSTAR2 ENCODE chrX:37545356-37545453
64251 chr3 43073835 43073835 1 + C T rs138304813 43073832 + 43073812 43073852 41 CTGCCTCTTGATGATCCTATCTGCGATGGCTGTCACCCGCT CTGCCTCTTGATGATCCTATCTGTGATGGCTGTCACCCGCT < 41bp 0.743324750844029 0.539591785208711 0.26722968 0.24066848 prediction 0.407465931270635 Functional Loss - FAM198A ENSG00000144649 CDS Human protein_coding chr3:43073832 chr3:43073835 nonsynonymous SNV 0.221 0 24 hm5C_associated_SNPs_95491 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585666 chr3:43073831-43073850
64251 chr12 45695844 45695844 1 + G A COAD 45695841 + 45695821 45695861 41 TTGTCCCCGATTTGGGATCACTGGAAAGTCAGCATGATTTT TTGTCCCCGATTTGGGATCACTGAAAAGTCAGCATGATTTT < 41bp 0.7037299163546 0.465905245835212 0.22036612 0.05042237 prediction 0.407459832709201 Functional Loss - ANO6 ENSG00000177119 CDS Human protein_coding chr12:45695841 chr12:45695844 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_95493 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:45695818-45695856
64251 chr17 42428095 42428095 1 + G A ESCA 42428092 + 42428072 42428112 41 CTCGGTCATGTGTCCGGACGCACGGTCCCGGTGCCCTGATG CTCGGTCATGTGTCCGGACGCACAGTCCCGGTGCCCTGATG < 41bp 0.840338145744057 0.636622960973319 0.29312915 0.14058033 prediction 0.407430369541477 Functional Loss - GRN ENSG00000030582 CDS Human protein_coding chr17:42428092 chr17:42428095 nonsynonymous SNV 0.126 0 24 hm5C_associated_SNPs_95502 1 0 7 FXR2 POSTAR2 ENCODE chr17:42428060-42428109
64251 chr9 127982945 127982945 1 + C T CESC 127982943 + 127982923 127982963 41 GCGGAGAGAGAGGTGCCCAGCCCGTGCAGGACACGAAGCTG GCGGAGAGAGAGGTGCCCAGCCTGTGCAGGACACGAAGCTG < 41bp 0.703710605970229 0.438690831039038 0.10607666 0.07244599 prediction 0.407421211940458 Functional Loss - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127982943 chr9:127982945 synonymous SNV . 0 23 hm5C_associated_SNPs_95507 0 0 1 GRWD1 POSTAR2 ENCODE chr9:127982880-127982955
64251 chrX 16761937 16761937 1 + G T UCEC 16761934 + 16761914 16761954 41 CAGGAGGATGAGCTGCTAAGCAAGATGAGATTTGCCCTCGT CAGGAGGATGAGCTGCTAAGCAATATGAGATTTGCCCTCGT < 41bp 0.936894713622469 0.733190965177671 0.37937212 0.1329538 prediction 0.407407496889596 Functional Loss - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16761934 chrX:16761937 nonsynonymous SNV 0.977 1 24 hm5C_associated_SNPs_95511 0 0 1 GRWD1 POSTAR2 ENCODE chrX:16761866-16761977
64251 chr6 28251948 28251948 1 + G T STAD 28251945 + 28251925 28251965 41 GAGAGGAGGCAGTGACAGTGCTGGAGAATCTAGAGACAGGA GAGAGGAGGCAGTGACAGTGCTGTAGAATCTAGAGACAGGA < 41bp 0.929885922508731 0.72618342005451 0.1346027 0.15996975 prediction 0.407405004908443 Functional Loss - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28251945 chr6:28251948 stopgain 0.450 0 24 hm5C_associated_SNPs_95512 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:28251935-28251961
64251 chr1 166819213 166819213 1 + G T COAD 166819209 + 166819189 166819229 41 CAGGAGCAGTGCCCAAGCAGCGAGGGATGCTGATCTTGAAT CAGGAGCAGTGCCCAAGCAGCGAGTGATGCTGATCTTGAAT < 41bp 0.710465292977166 0.506764323001148 0.9061737 0.73639715 prediction 0.407401939952037 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166819209 chr1:166819213 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_95513 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:166819137-166819215
64251 chr3 183900562 183900562 1 + G A STAD 183900559 + 183900539 183900579 41 TCCCAGGATCAAGCGCATGGCAGGCATGAAGGAATCGCAGA TCCCAGGATCAAGCGCATGGCAGACATGAAGGAATCGCAGA < 41bp 0.703700906140359 0.461627435005367 0.41983852 0.2874557 prediction 0.407401812280718 Functional Loss - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183900559 chr3:183900562 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95514 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:183900540-183900580
64251 chr17 40695347 40695347 1 + G A STAD 40695344 + 40695324 40695364 41 CCCAACTCCACCATGGTAGGCACGGGCATGGCCCCCGAGGG CCCAACTCCACCATGGTAGGCACAGGCATGGCCCCCGAGGG < 41bp 0.703696915600946 0.453058529882395 0.61184055 0.44628066 prediction 0.407393831201893 Functional Loss - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695344 chr17:40695347 synonymous SNV . 0 24 hm5C_associated_SNPs_95518 0 0 2 RBM15 POSTAR2 ENCODE chr17:40695308-40695400
64251 chr18 67993164 67993164 1 + G A HNSC 67993161 + 67993141 67993181 41 GACGACCGTTACCTTTTAAGCTTGAGCTTTCGCTCCCATGG GACGACCGTTACCTTTTAAGCTTAAGCTTTCGCTCCCATGG < 41bp 0.703696434646667 0.466833397247589 0.028454423 0.016515762 prediction 0.407392869293334 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67993161 chr18:67993164 synonymous SNV . 0 24 hm5C_associated_SNPs_95519 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:67993161-67993215
64251 chr19 57133306 57133306 1 + C T STAD 57133303 + 57133283 57133323 41 GGCGAGAAGCCGTATGTGTGCGACGTGTGTGGCAAGGCCTT GGCGAGAAGCCGTATGTGTGCGATGTGTGTGGCAAGGCCTT < 41bp 0.713639630059482 0.509948633422756 0.5334454 0.51713556 prediction 0.407381993273452 Functional Loss - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133303 chr19:57133306 synonymous SNV . 0 24 hm5C_associated_SNPs_95523 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:57133300-57133314
64251 chr1 36558904 36558904 1 + G A CESC 36558901 + 36558881 36558921 41 ACTATGGGATGGATCAGGTGCCAGAGAGCTGGCAGCAAAGC ACTATGGGATGGATCAGGTGCCAAAGAGCTGGCAGCAAAGC < 41bp 0.703690195681926 0.472266704988697 0.81467783 0.16184366 prediction 0.407380391363851 Functional Loss - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36558901 chr1:36558904 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_95525 0 0 1 RBM15 POSTAR2 ENCODE chr1:36558828-36558908
64251 chr5 140024251 140024251 1 + C T STAD 140024249 + 140024229 140024269 41 GCTTCCCGCCTTGCTGCACACACTAGCCTTTTCTGACACTG GCTTCCCGCCTTGCTGCACACATTAGCCTTTTCTGACACTG < 41bp 0.703688743333576 0.424312291391878 0.010810375 0.012578338 prediction 0.407377486667152 Functional Loss - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140024249 chr5:140024251 synonymous SNV . 0 23 hm5C_associated_SNPs_95526 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:140024229-140024254
64251 chr1 162326880 162326880 1 + A T LUAD 162326876 + 162326856 162326896 41 ACCACCAGATGCAGCTCCTCCAGCAGCTCCTCCAGCAGCAG ACCACCAGATGCAGCTCCTCCAGCTGCTCCTCCAGCAGCAG < 41bp 0.703688348828209 0.379885143320192 0.24726504 0.518598 prediction 0.407376697656419 Functional Loss - NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162326876 chr1:162326880 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_95527 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:162326866-162326893
64251 chr16 67237075 67237075 1 + G C HNSC 67237071 + 67237051 67237091 41 AACCACAAGCTGCTGCAGTACGGAGACATGGAGGAGGGCGC AACCACAAGCTGCTGCAGTACGGACACATGGAGGAGGGCGC < 41bp 0.703679645209839 0.40554707188246 0.8784297 0.5841291 prediction 0.407359290419678 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67237071 chr16:67237075 nonsynonymous SNV 0.984 4 25 hm5C_associated_SNPs_95536 0 0 2 BUD13 POSTAR2 ENCODE chr16:67236969-67237082
64251 chr6 144109947 144109947 1 + G A STAD 144109944 + 144109924 144109964 41 CACAGTGGCAGAGCTACAAGCTCGAAGGATCCTGCGATTTA CACAGTGGCAGAGCTACAAGCTCAAAGGATCCTGCGATTTA < 41bp 0.772509748282916 0.56883102979881 0.38840172 0.2695169 prediction 0.407357436968211 Functional Loss - PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144109944 chr6:144109947 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95537 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:144109924-144109959
64251 chr5 60628342 60628342 1 + G T rs553592342 60628339 + 60628319 60628359 41 CCCGAGTCGCTGCTGGACATCGCGGCGCGCAGGGTGGCGGA CCCGAGTCGCTGCTGGACATCGCTGCGCGCAGGGTGGCGGA < 41bp 0.93263421660896 0.728958341848087 0.9131547 0.3624419 prediction 0.407351749521745 Functional Loss - ZSWIM6 ENSG00000130449 CDS Human protein_coding chr5:60628339 chr5:60628342 synonymous SNV . 0 24 hm5C_associated_SNPs_95541 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:60628324-60628347
64251 chr2 120012344 120012344 1 + G A rs188660715 120012341 + 120012321 120012361 41 TCTCCCTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGCTG TCTCCCTGGGAGTGCTGGCCCTCAGCACGTTGTCCCTGCTG < 41bp 0.831693611353686 0.628018686082496 0.29918227 0.10078046 prediction 0.40734985054238 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120012341 chr2:120012344 nonsynonymous SNV 0.555 4 24 hm5C_associated_SNPs_95542 0 0 5 RPS3 POSTAR2 ENCODE chr2:120012314-120012364
64251 chr15 91485698 91485698 1 + G A rs145502142 91485695 + 91485675 91485715 41 AACCCTGAGCATACTGGGAACTCGGCGAGTAGTCTCCATCC AACCCTGAGCATACTGGGAACTCAGCGAGTAGTCTCCATCC < 41bp 0.703673484300062 0.451041817590629 0.3693651 0.13857439 prediction 0.407346968600125 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91485695 chr15:91485698 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_95543 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:91485668-91485704
64251 chr15 91485697 91485697 1 + C T LUAD 91485695 + 91485675 91485715 41 AACCCTGAGCATACTGGGAACTCGGCGAGTAGTCTCCATCC AACCCTGAGCATACTGGGAACTTGGCGAGTAGTCTCCATCC < 41bp 0.703673484300062 0.422369685800915 0.3693651 0.17227459 prediction 0.407346968600125 Functional Loss - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91485695 chr15:91485697 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_95544 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:91485668-91485704
64251 chr14 20925314 20925314 1 + C T STAD 20925312 + 20925292 20925332 41 GTTCCTGAAGGGCCTGGCTTCCCGAAAGCCCCTTGTGCTGT GTTCCTGAAGGGCCTGGCTTCCTGAAAGCCCCTTGTGCTGT < 41bp 0.868425901756477 0.664754383876693 0.20480958 0.15948799 prediction 0.407343035759568 Functional Loss - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20925312 chr14:20925314 stopgain 0.720 0 23 hm5C_associated_SNPs_95547 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20925280-20925320
64251 chr3 10183797 10183797 1 + T C KIRC 10183796 + 10183776 10183816 41 GCGTCGTGCTGCCCGTATGGCTCAACTTCGACGGCGAGCCG GCGTCGTGCTGCCCGTATGGCCCAACTTCGACGGCGAGCCG < 41bp 0.805746337136419 0.602079020672464 0.105397075 0.042181045 prediction 0.40733463292791 Functional Loss - VHL ENSG00000134086 CDS Human protein_coding chr3:10183796 chr3:10183797 nonsynonymous SNV 0.991 5 22 hm5C_associated_SNPs_95550 2 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:10183720-10183808
64251 chr11 65771207 65771207 1 + C T COAD 65771204 + 65771184 65771224 41 GCCAAGCAGTCCCGGGACTGCTTCGGATGCCTTCGAGAGTG GCCAAGCAGTCCCGGGACTGCTTTGGATGCCTTCGAGAGTG < 41bp 0.746931459354221 0.543269352926591 0.42153025 0.33777446 prediction 0.40732421285526 Functional Loss - BANF1 ENSG00000175334 CDS Human protein_coding chr11:65771204 chr11:65771207 synonymous SNV . 0 24 hm5C_associated_SNPs_95553 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:65771171-65771233
64251 chr19 45910444 45910444 1 + G A SARC 45910441 + 45910421 45910461 41 CCTTGGAGGCGCTGACGGGTCCAGATACGGAGCTGTGGCTT CCTTGGAGGCGCTGACGGGTCCAAATACGGAGCTGTGGCTT < 41bp 0.837231695355856 0.633570559586073 0.17248261 0.028505802 prediction 0.407322271539565 Functional Loss - CD3EAP ENSG00000117877 CDS Human protein_coding chr19:45910441 chr19:45910444 nonsynonymous SNV 0.400 3 24 hm5C_associated_SNPs_95554 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:45910422-45910474
64251 chr17 40940201 40940201 1 + G A SKCM 40940198 + 40940178 40940218 41 CCTGGAAGTGACTTTTCCCCCGGGGACAGGTATGTTCTGGT CCTGGAAGTGACTTTTCCCCCGGAGACAGGTATGTTCTGGT < 41bp 0.703658977493841 0.45637795317229 0.8890125 0.6523096 prediction 0.407317954987682 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40940198 chr17:40940201 synonymous SNV . 0 24 hm5C_associated_SNPs_95556 0 0 3 EFTUD2 POSTAR2 ENCODE chr17:40940180-40940259
64251 chrX 77378727 77378727 1 + G A LUSC 77378724 + 77378704 77378744 41 CTGTTTGATGAAGAGGGAGCCAAGATTGTCAAAGACCTAAT CTGTTTGATGAAGAGGGAGCCAAAATTGTCAAAGACCTAAT < 41bp 0.782956787782157 0.579298364789829 0.31515872 0.07394627 prediction 0.407316845984657 Functional Loss - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378724 chrX:77378727 synonymous SNV . 0 24 hm5C_associated_SNPs_95557 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:77378714-77378750
64251 chr22 20761149 20761149 1 + G T UCEC 20761146 + 20761126 20761166 41 CCTGCTGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATC CCTGCTGGGTGCAGGGGATGCTGTACTGAGGGACGTGGATC < 41bp 0.935744303550412 0.732088438244542 0.7507255 0.41013166 prediction 0.407311730611742 Functional Loss - ZNF74 ENSG00000185252 CDS Human protein_coding chr22:20761146 chr22:20761149 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_95561 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:20761127-20761165
64251 chr1 93297630 93297630 1 + A C rs145634330 93297626 + 93297606 93297646 41 ACCCCCTAGCGCCGCTGGGCCTGCAGGTCTCTGTCGAGCAG ACCCCCTAGCGCCGCTGGGCCTGCCGGTCTCTGTCGAGCAG < 41bp 0.925490214249384 0.721840692717065 0.07659629 0.05232054 prediction 0.407299043064639 Functional Loss - RPL5 ENSG00000122406 UTR5 Human protein_coding chr1:93297626 chr1:93297630 . . 0 25 hm5C_associated_SNPs_95563 1 0 56 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:93297628-93297656
64251 chr5 52780984 52780984 1 + C T OV 52780981 + 52780961 52781001 41 AGTGACAATGCCACTTATGCCAGCGAGTGTGCCATGAAGGA AGTGACAATGCCACTTATGCCAGTGAGTGTGCCATGAAGGA < 41bp 0.736898617121223 0.53325325435541 0.39511585 0.15635595 prediction 0.407290725531627 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52780981 chr5:52780984 synonymous SNV . 0 24 hm5C_associated_SNPs_95566 0 0 2 FASTKD2 POSTAR2 ENCODE chr5:52780971-52780998
64251 chrX 13778755 13778755 1 + C T CESC 13778752 + 13778732 13778772 41 CAGGCAGTGCAGCCTCGAGGCTCCGCGGGGGCACTTCCTCC CAGGCAGTGCAGCCTCGAGGCTCTGCGGGGGCACTTCCTCC < 41bp 0.748275609344745 0.544631084445059 0.41850027 0.34730256 prediction 0.407289049799371 Functional Loss - OFD1 ENSG00000046651 CDS Human protein_coding chrX:13778752 chrX:13778755 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_95567 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:13778735-13778774
64251 chr1 230416399 230416399 1 + G T rs1043897 230416397 + 230416377 230416417 41 CACAGGCCTGGCTCACAGTCCTGCACACCTGCTGGCCTGGG CACAGGCCTGGCTCACAGTCCTTCACACCTGCTGGCCTGGG < 41bp 0.703634812638592 0.379083542915741 0.17608324 0.3472175 prediction 0.407269625277184 Functional Loss - GALNT2 ENSG00000224407 ncRNA_exonic Human antisense chr1:230416397 chr1:230416399 . . 0 23 hm5C_associated_SNPs_95571 0 1 5 FAM120A POSTAR2 ENCODE chr1:230416386-230416489
64251 chr2 131103191 131103191 1 + G A LUSC 131103188 + 131103168 131103208 41 AGCGAATGAACCGAGGTCGACATGAAGTGGGGGCACTGGTG AGCGAATGAACCGAGGTCGACATAAAGTGGGGGCACTGGTG < 41bp 0.703634343374924 0.457755022701411 0.49853545 0.507788 prediction 0.407268686749848 Functional Loss - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103188 chr2:131103191 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_95574 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:131103180-131103200
64251 chr3 9975139 9975139 1 + G A rs189013166 9975136 + 9975116 9975156 41 CAGCCTCGCGCCCCGCGTTCCGGGCGGCTCCAAGAGAGAGC CAGCCTCGCGCCCCGCGTTCCGGACGGCTCCAAGAGAGAGC < 41bp 0.703632472906498 0.463120484684721 0.89736706 0.67822576 prediction 0.407264945812996 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9975136 chr3:9975139 synonymous SNV . 0 24 hm5C_associated_SNPs_95575 0 0 1 LARP4 POSTAR2 ENCODE chr3:9975065-9975147
64251 chr1 206566919 206566919 1 + G A CESC 206566916 + 206566896 206566936 41 TTTCAGCGTCAAGCCAAGTACACGGAGAATAAGCTGAAGGC TTTCAGCGTCAAGCCAAGTACACAGAGAATAAGCTGAAGGC < 41bp 0.703630542298985 0.462695184420195 0.40479702 0.15780899 prediction 0.40726108459797 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566916 chr1:206566919 synonymous SNV . 0 24 hm5C_associated_SNPs_95576 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:206566916-206566950
64251 chr1 206566918 206566918 1 + C T UCEC 206566916 + 206566896 206566936 41 TTTCAGCGTCAAGCCAAGTACACGGAGAATAAGCTGAAGGC TTTCAGCGTCAAGCCAAGTACATGGAGAATAAGCTGAAGGC < 41bp 0.703630542298985 0.412272835629924 0.40479702 0.20249131 prediction 0.40726108459797 Functional Loss - SRGAP2 ENSG00000163486 CDS Human other chr1:206566916 chr1:206566918 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_95577 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:206566916-206566950
64251 chr5 137682604 137682604 1 + C T MESO 137682601 + 137682581 137682621 41 TGAGCAAGCGGACACTGTGCCAGCGGGACTTTGGGGACCTG TGAGCAAGCGGACACTGTGCCAGTGGGACTTTGGGGACCTG < 41bp 0.739275319856217 0.535650552225574 0.7161065 0.26468894 prediction 0.407249535261286 Functional Loss - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137682601 chr5:137682604 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_95582 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:137682530-137682622
64251 chr12 71977609 71977609 1 + G T KIRC 71977605 + 71977585 71977625 41 ATCGCAGCAGTGAACATGCTCACGGGAGTCTCCAGTGCCGT ATCGCAGCAGTGAACATGCTCACGTGAGTCTCCAGTGCCGT < 41bp 0.732972232725578 0.529347494086944 0.9224919 0.8420912 prediction 0.407249477277269 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977605 chr12:71977609 stopgain 0.006 1 25 hm5C_associated_SNPs_95583 0 0 2 RPS3 POSTAR2 ENCODE chr12:71977579-71977616
64251 chr17 4844434 4844434 1 + G A CESC 4844431 + 4844411 4844451 41 CCAGCTCTGTTTGGGGCTACCTTGAGCCAGGAGGGCCTCCA CCAGCTCTGTTTGGGGCTACCTTAAGCCAGGAGGGCCTCCA < 41bp 0.808188855201385 0.60456743174122 0.28723907 0.2663344 prediction 0.407242846920329 Functional Loss - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4844431 chr17:4844434 synonymous SNV . 0 24 hm5C_associated_SNPs_95585 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4844426-4844452
64251 chr1 2492143 2492143 1 + C T LUSC 2492140 + 2492120 2492160 41 ATGGGACCCTGGAGGAATGTCAGCACCAGACCAAGTAAGTG ATGGGACCCTGGAGGAATGTCAGTACCAGACCAAGTAAGTG < 41bp 0.736353654458597 0.532733345406901 0.3837148 0.31897503 prediction 0.407240618103392 Functional Loss - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2492140 chr1:2492143 nonsynonymous SNV 0.081 0 24 hm5C_associated_SNPs_95586 0 0 1 GRWD1 POSTAR2 ENCODE chr1:2492092-2492152
64251 chr1 32646994 32646994 1 + C T UCEC 32646992 + 32646972 32647012 41 CACAGGGTGAGCCGGCTGAACCCGAAGATGCAGAGAAGTCC CACAGGGTGAGCCGGCTGAACCTGAAGATGCAGAGAAGTCC < 41bp 0.703616975004209 0.419440648523418 0.067340046 0.08947757 prediction 0.407233950008419 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32646992 chr1:32646994 synonymous SNV . 0 23 hm5C_associated_SNPs_95591 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:32646877-32647079
64251 chr17 66040122 66040122 1 + C T LUSC 66040119 + 66040099 66040139 41 TGTCAAACATCACAGCCGGCCGCCAGGACCAGATACAGCAA TGTCAAACATCACAGCCGGCCGCTAGGACCAGATACAGCAA < 41bp 0.804653963959063 0.601041324342992 0.041004628 0.022648662 prediction 0.407225279232141 Functional Loss - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66040119 chr17:66040122 stopgain 0.778 0 24 hm5C_associated_SNPs_95596 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:66040081-66040187
64251 chr16 2820429 2820429 1 + C T rs116681042 2820426 + 2820406 2820446 41 GCTACTCGCCTGTGGAGCGTCGCCGTCCCTCGCCCCAGCCC GCTACTCGCCTGTGGAGCGTCGCTGTCCCTCGCCCCAGCCC < 41bp 0.730474404786795 0.526865150268897 0.1052953 0.037155032 prediction 0.407218509035796 Functional Loss - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2820426 chr16:2820429 nonsynonymous SNV 0.914 0 24 hm5C_associated_SNPs_95601 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:2820340-2820440
64251 chr10 116710908 116710908 1 + G A PAAD 116710905 + 116710885 116710925 41 ACCAGTATGTTGTCAGGGTCCAAGGTAAGAATACTGAAATA ACCAGTATGTTGTCAGGGTCCAAAGTAAGAATACTGAAATA < 41bp 0.703600107932198 0.485317607823752 0.38894963 0.187112 prediction 0.407200215864396 Functional Loss - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116710905 chr10:116710908 synonymous SNV . 0 24 hm5C_associated_SNPs_95607 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:116710884-116710908
64251 chr15 41191478 41191478 1 + G T UCEC 41191474 + 41191454 41191494 41 TTGGAACAAGGCACTGGGCACGGAGAGCAGCACAGGCCCCA TTGGAACAAGGCACTGGGCACGGATAGCAGCACAGGCCCCA < 41bp 0.730002223216215 0.52640624398794 0.6380671 0.3240027 prediction 0.407191958456549 Functional Loss - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41191474 chr15:41191478 nonsynonymous SNV 0.982 1 25 hm5C_associated_SNPs_95610 0 0 1 RBM15 POSTAR2 ENCODE chr15:41191444-41191499
64251 chr16 67913505 67913505 1 + G A UCEC 67913502 + 67913482 67913522 41 CCCTGCAGCATTTGGAGAGTCTCGGCCCGAACTGGGCTCTG CCCTGCAGCATTTGGAGAGTCTCAGCCCGAACTGGGCTCTG < 41bp 0.814580243731287 0.610984418843406 0.7021704 0.38918006 prediction 0.407191649775763 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913502 chr16:67913505 nonsynonymous SNV 0.981 1 24 hm5C_associated_SNPs_95611 0 0 2 FMR1 POSTAR2 ENCODE chr16:67913497-67913552
64251 chr6 52268720 52268720 1 + C T rs140488811 52268717 + 52268697 52268737 41 CACACCGTGTGGCGCTCTGTCACCTGGCTGGCTGCCAGGAG CACACCGTGTGGCGCTCTGTCACTTGGCTGGCTGCCAGGAG < 41bp 0.748519344955007 0.544926158953698 0.17564395 0.06284234 prediction 0.407186372002617 Functional Loss - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268717 chr6:52268720 synonymous SNV . 0 24 hm5C_associated_SNPs_95613 0 0 1 YBX3 POSTAR2 ENCODE chr6:52268687-52268758
64251 chr11 608871 608871 1 + C T rs182417771 608868 + 608848 608888 41 GGCTCTGCAGGCACAAGCATCAGCGGGAACGCAGCCACGAG GGCTCTGCAGGCACAAGCATCAGTGGGAACGCAGCCACGAG < 41bp 0.707633892862438 0.504043940799477 0.85325325 0.5451106 prediction 0.407179904125922 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608868 chr11:608871 nonsynonymous SNV 0.003 4 24 hm5C_associated_SNPs_95616 0 0 2 BUD13 POSTAR2 ENCODE chr11:608807-608876
64251 chr19 3533395 3533395 1 + T C UCEC 3533394 + 3533374 3533414 41 ACTCCTACCGCGTGCTGTACCTGGTGAGTTCACGCCAGGCA ACTCCTACCGCGTGCTGTACCCGGTGAGTTCACGCCAGGCA < 41bp 0.819435356735991 0.615861351898751 0.36837763 0.29379666 prediction 0.40714800967448 Functional Loss - FZR1 ENSG00000105325 CDS Human protein_coding chr19:3533394 chr19:3533395 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_95631 0 0 3 PRPF8 POSTAR2 ENCODE chr19:3533364-3533443
64251 chr4 1389459 1389459 1 + A C UCEC 1389458 + 1389438 1389478 41 GTGGAGTGCCTGCCTGCTCACACACGTGCCCATGTGGAGTG GTGGAGTGCCTGCCTGCTCACCCACGTGCCCATGTGGAGTG < 41bp 0.70357359947298 0.45848971877712 0.09502977 0.004490435 prediction 0.407147198945959 Functional Loss - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389458 chr4:1389459 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_95632 0 0 1 EIF3H POSTAR2 ENCODE chr4:1389437-1389545
64251 chr10 13652107 13652107 1 + C T UCEC 13652104 + 13652084 13652124 41 CAGTACCTCAATGAAATCGTCGGCGGTCAGGAGCCTGGAGA CAGTACCTCAATGAAATCGTCGGTGGTCAGGAGCCTGGAGA < 41bp 0.703573189247027 0.484344173561398 0.86782897 0.42460704 prediction 0.407146378494055 Functional Loss - PRPF18 ENSG00000165630;ENSG00000239665 CDS Human other chr10:13652104 chr10:13652107 synonymous SNV . 0 24 hm5C_associated_SNPs_95634 0 0 3 UCHL5 POSTAR2 ENCODE chr10:13652071-13652123
64251 chr12 22778226 22778226 1 + T C COAD 22778225 + 22778205 22778245 41 CTCCAGACGTTCTCCTGCCGCTCGCCCGCCCGTCCCAGCGC CTCCAGACGTTCTCCTGCCGCCCGCCCGCCCGTCCCAGCGC < 41bp 0.775362618461222 0.571790487032966 0.14564642 0.039097518 prediction 0.407144262856511 Functional Loss - ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22778225 chr12:22778226 synonymous SNV . 0 22 hm5C_associated_SNPs_95636 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:22778196-22778226
64251 chr5 145838723 145838723 1 + G T LUAD 145838719 + 145838699 145838739 41 GCTCAGGCACAAGCTCAGGCCCAGGCCCAGGCTCAGGTCCA GCTCAGGCACAAGCTCAGGCCCAGTCCCAGGCTCAGGTCCA < 41bp 0.711605774948279 0.508034019705643 0.21848613 0.15159827 prediction 0.407143510485272 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838719 chr5:145838723 nonsynonymous SNV 0.027 0 25 hm5C_associated_SNPs_95638 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr17 21731313 21731313 1 + G C COAD 21731312 + 21731292 21731332 41 GGCAAGCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAA GGCAAGCAGCTGGAAGATGGCCGTACTCTTTCTGACTACAA < 41bp 0.703570178608962 0.386399116727388 0.22597855 0.10464892 prediction 0.407140357217925 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731312 chr17:21731313 synonymous SNV . 0 22 hm5C_associated_SNPs_95640 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr17 21731316 21731316 1 + A T LUAD 21731312 + 21731292 21731332 41 GGCAAGCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAA GGCAAGCAGCTGGAAGATGGCGGTTCTCTTTCTGACTACAA < 41bp 0.703570178608962 0.3951117152731 0.22597855 0.16270196 prediction 0.407140357217925 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731312 chr17:21731316 synonymous SNV . 0 25 hm5C_associated_SNPs_95641 0 0 5 LIN28B POSTAR2 ENCODE chr17:21731295-21731359
64251 chr20 45355616 45355616 1 + G A GBM 45355613 + 45355593 45355633 41 TCTTCATCAGCCTCTCCTTCCTCGATCTCATTGGTGAGTCC TCTTCATCAGCCTCTCCTTCCTCAATCTCATTGGTGAGTCC < 41bp 0.81900945161471 0.615440352169991 0.706805 0.4855345 prediction 0.407138198889438 Functional Loss - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45355613 chr20:45355616 nonsynonymous SNV 0.925 1 24 hm5C_associated_SNPs_95644 1 0 1 PRPF8 POSTAR2 ENCODE chr20:45355603-45355667
64251 chr1 151260525 151260525 1 + G A HNSC 151260522 + 151260502 151260542 41 CTCCTGCATGCACGTGAACACAAGGACAAGGGGCTCGTCAT CTCCTGCATGCACGTGAACACAAAGACAAGGGGCTCGTCAT < 41bp 0.70356405045963 0.457983880808097 0.26549774 0.043910503 prediction 0.407128100919261 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151260522 chr1:151260525 synonymous SNV . 0 24 hm5C_associated_SNPs_95650 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151260517-151260543
64251 chr2 120003228 120003228 1 + C T SKCM 120003225 + 120003205 120003245 41 ACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAG ACACGCCTGGTGGGCTCTGGCTTTAAAGTGGTGGTGGGGAG < 41bp 0.70356019639255 0.473346286383409 0.17013073 0.22907484 prediction 0.4071203927851 Functional Loss - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120003225 chr2:120003228 synonymous SNV . 0 24 hm5C_associated_SNPs_95653 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:120003220-120003240
64251 chr18 12009941 12009941 1 + C T UCEC 12009938 + 12009918 12009958 41 GTGTGTGCTCACCCACAGCCCGACGTGGATCATCGACCCCA GTGTGTGCTCACCCACAGCCCGATGTGGATCATCGACCCCA < 41bp 0.741232148256905 0.537674426800451 0.25808164 0.13919032 prediction 0.407115442912909 Functional Loss - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12009938 chr18:12009941 nonsynonymous SNV 0.687 4 24 hm5C_associated_SNPs_95656 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr18:12009920-12009946
64251 chr6 33423613 33423613 1 + C T PRAD 33423610 + 33423590 33423630 41 AGAGAGTATCAGGGGTTTTTCCCCGTCCTCATGGACCCCAC AGAGAGTATCAGGGGTTTTTCCCTGTCCTCATGGACCCCAC < 41bp 0.703552191007695 0.490250621516674 0.3631011 0.09812963 prediction 0.407104382015389 Functional Loss - ZBTB9 ENSG00000213588 CDS Human protein_coding chr6:33423610 chr6:33423613 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_95662 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:33423599-33423631
64251 chr9 82267687 82267687 1 + C T SKCM 82267685 + 82267665 82267705 41 CAATTAAAGATGAGAAGAAGCACCATGACAATGATCACCAA CAATTAAAGATGAGAAGAAGCATCATGACAATGATCACCAA < 41bp 0.703551351169145 0.470430979925367 0.11866459 0.06454307 prediction 0.407102702338291 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82267685 chr9:82267687 synonymous SNV . 0 23 hm5C_associated_SNPs_95664 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:82267668-82267688
64251 chr15 29346543 29346543 1 + C T ESCA 29346541 + 29346521 29346561 41 CGGGCCCGCACCCCCACGGCCACGAGGCTGAAGGCAGCCAG CGGGCCCGCACCCCCACGGCCATGAGGCTGAAGGCAGCCAG < 41bp 0.861822190441305 0.658273038215546 0.342084 0.48628756 prediction 0.407098304451519 Functional Loss - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346541 chr15:29346543 synonymous SNV . 0 23 hm5C_associated_SNPs_95666 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346495-29346544
64251 chr3 58116577 58116577 1 + G A COAD 58116574 + 58116554 58116594 41 GCCCGTGTCCTGCAGTCCTTCACGGTGGACAGCAGCAAGGC GCCCGTGTCCTGCAGTCCTTCACAGTGGACAGCAGCAAGGC < 41bp 0.810376478820504 0.606828010877655 0.6691265 0.27027398 prediction 0.407096935885699 Functional Loss - FLNB ENSG00000136068 CDS Human protein_coding chr3:58116574 chr3:58116577 synonymous SNV . 0 24 hm5C_associated_SNPs_95667 0 0 6 FMR1 POSTAR2 ENCODE chr3:58116571-58116634
64251 chr16 56500072 56500072 1 + C T UCEC 56500069 + 56500049 56500089 41 ATTAAACTATTGCAGATGCCCTGCTGTGCCATGATGATGAG ATTAAACTATTGCAGATGCCCTGTTGTGCCATGATGATGAG < 41bp 0.703547827948294 0.479883128937653 0.017129898 0.017368048 prediction 0.407095655896588 Functional Loss - OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56500069 chr16:56500072 synonymous SNV . 0 24 hm5C_associated_SNPs_95669 0 0 1 PPIG POSTAR2 ENCODE chr16:56500070-56500174
64251 chr1 113657144 113657144 1 + C T HNSC 113657142 + 113657122 113657162 41 AGCTGGAGGGAGTCCTGCCCCTCGTCTCAACTGGACTAAAG AGCTGGAGGGAGTCCTGCCCCTTGTCTCAACTGGACTAAAG < 41bp 0.703545823803292 0.406161859273398 0.041582495 0.06540087 prediction 0.407091647606583 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657142 chr1:113657144 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_95672 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:113657133-113657154
64251 chr9 138396198 138396198 1 + A C rs3748201 138396197 + 138396177 138396217 41 AGAGCACAGAGGGTGAGCGACATGTGCAGAACGGCCCCTTG AGAGCACAGAGGGTGAGCGACCTGTGCAGAACGGCCCCTTG < 41bp 0.703543195868811 0.435762372404854 0.4391634 0.25065202 prediction 0.407086391737622 Functional Loss - LOC101928525 ENSG00000226706 ncRNA_intronic Human antisense chr9:138396197 chr9:138396198 . . 0 22 hm5C_associated_SNPs_95673 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:138396185-138396205
64251 chr2 64111152 64111152 1 + C T COAD 64111150 + 64111130 64111170 41 GTTTTAATGAACTCTTTTAACACGGATGAAGATACCAAAAA GTTTTAATGAACTCTTTTAACATGGATGAAGATACCAAAAA < 41bp 0.859808494839214 0.656274712026095 0.3838692 0.41688445 prediction 0.407067565626238 Functional Loss - UGP2 ENSG00000169764 CDS Human protein_coding chr2:64111150 chr2:64111152 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_95683 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:64111105-64111163
64251 chr17 80684910 80684910 1 + G T rs61740985 80684907 + 80684887 80684927 41 GCTCCTTTTACTCCGCCTACCACGGCAAAATCCCCAAGGCC GCTCCTTTTACTCCGCCTACCACTGCAAAATCCCCAAGGCC < 41bp 0.703533409103422 0.298047484195866 0.25398657 0.16214725 prediction 0.407066818206845 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684907 chr17:80684910 nonsynonymous SNV 0.149 1 24 hm5C_associated_SNPs_95684 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:80684887-80684919
64251 chr16 31717029 31717029 1 + C T rs557794640 31717026 + 31717006 31717046 41 AAAGACTTGGAGATGGACCCCACCGACTGCACACCACCCAA AAAGACTTGGAGATGGACCCCACTGACTGCACACCACCCAA < 41bp 0.703997669730185 0.500471760290319 0.045285255 0.056636572 prediction 0.407051818879733 Functional Loss - CLUHP3 ENSG00000131797 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:31717026 chr16:31717029 . . 0 24 hm5C_associated_SNPs_95691 0 0 5 BUD13 POSTAR2 ENCODE chr16:31716980-31717043
64251 chr2 54858167 54858167 1 + C T UCEC 54858164 + 54858144 54858184 41 ACCTGGCTGGCGTCATGGCCCTGCAGCGCAAGCTGACCGGC ACCTGGCTGGCGTCATGGCCCTGTAGCGCAAGCTGACCGGC < 41bp 0.754091619107564 0.550568680861029 0.12732297 0.038968503 prediction 0.40704587649307 Functional Loss - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54858164 chr2:54858167 stopgain 1.000 1 24 hm5C_associated_SNPs_95693 0 0 9 FMR1 POSTAR2 ENCODE chr2:54858137-54858196
64251 chrX 100668287 100668287 1 + G T HNSC 100668285 + 100668265 100668305 41 TGAGTGGATATGACCAAGTTCTGCAGGAAAACTCCAGTGAC TGAGTGGATATGACCAAGTTCTTCAGGAAAACTCCAGTGAC < 41bp 0.874473888170256 0.670952390460482 0.28522003 0.19898826 prediction 0.407042995419549 Functional Loss - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668285 chrX:100668287 synonymous SNV . 0 23 hm5C_associated_SNPs_95697 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:100668244-100668287
64251 chr1 161088995 161088995 1 + C T UCEC 161088992 + 161088972 161089012 41 GGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAACAGA GGCTGTGTGCCAGGTAACATCGATGCCAGACAAGCAACAGA < 41bp 0.783605992055484 0.580086005914451 0.50468147 0.26956496 prediction 0.407039972282065 Functional Loss - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088992 chr1:161088995 nonsynonymous SNV 0.972 5 24 hm5C_associated_SNPs_95699 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:161088976-161089014
64251 chr2 131904296 131904296 1 + G A UCEC 131904293 + 131904273 131904313 41 GCGACCTGGCACTGGGCATGCTGGCAGGAGCAGCCACGGGC GCGACCTGGCACTGGGCATGCTGACAGGAGCAGCCACGGGC < 41bp 0.703517517543654 0.485103643734677 0.05830866 0.0499281 prediction 0.407035035087308 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131904293 chr2:131904296 stopgain 0.994 3 24 hm5C_associated_SNPs_95701 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:131904275-131904320
64251 chr18 72997831 72997831 1 + A C LIHC 72997827 + 72997807 72997847 41 AGCCAGAAGGAGAGCTCCGCCCCCACCCCCACACCCCCCAC AGCCAGAAGGAGAGCTCCGCCCCCCCCCCCACACCCCCCAC < 41bp 0.703510144377248 0.290586022102866 0.2595015 0.2827161 prediction 0.407020288754496 Functional Loss - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72997827 chr18:72997831 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_95707 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:72997812-72997849
64251 chr2 173855595 173855595 1 + G A SKCM 173855592 + 173855572 173855612 41 ATGACCAAGATGTCTTGGTGCTGGAGAAGGTCCCAGCAGGG ATGACCAAGATGTCTTGGTGCTGAAGAAGGTCCCAGCAGGG < 41bp 0.775607541432231 0.572098815420303 0.8503914 0.43017563 prediction 0.407017452023855 Functional Loss - RAPGEF4 ENSG00000091428 CDS Human protein_coding chr2:173855592 chr2:173855595 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95708 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr2:173855580-173855600
64251 chr8 74888585 74888585 1 + G C rs140061938 74888581 + 74888561 74888601 41 TCTCTGCGGAAGGAGGACTGCATTGTGTGCGGCCGCCGCGC TCTCTGCGGAAGGAGGACTGCATTCTGTGCGGCCGCCGCGC < 41bp 0.703508308232863 0.416012338398466 0.69832444 0.5796689 prediction 0.407016616465726 Functional Loss - TMEM70 ENSG00000175606 CDS Human protein_coding chr8:74888581 chr8:74888585 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_95709 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr8:74888560-74888600
64251 chr7 99707825 99707825 1 - C T SKCM 99707828 - 99707808 99707848 41 CAGGCTTGGCTGAGCTGGGACACGATGTTAGGCCTCTGGGA CAGGCTTGGCTGAGCTGGGACACAATGTTAGGCCTCTGGGA < 41bp 0.703500634459449 0.442940262119458 0.5837198 0.70399266 prediction 0.407001268918897 Functional Loss - TAF6 ENSG00000106290;ENSG00000221838 CDS Human other chr7:99707828 chr7:99707825 nonsynonymous SNV 0.643 3 24 hm5C_associated_SNPs_95723 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99707824-99707844
64251 chr20 45801458 45801458 1 + G A PAAD 45801455 + 45801435 45801475 41 GCGTGGACTGGATGAGGAAGCTGGCCTTCCGCTACCGGCGG GCGTGGACTGGATGAGGAAGCTGACCTTCCGCTACCGGCGG < 41bp 0.703500209395098 0.450370958259615 0.4244135 0.41617787 prediction 0.407000418790197 Functional Loss - EYA2 ENSG00000064655 CDS Human protein_coding chr20:45801455 chr20:45801458 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_95724 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:45801449-45801490
64251 chr17 4927255 4927255 1 + C T SKCM 4927253 + 4927233 4927273 41 CCTGGATGGAGGGGGCCGATCCCGGGGAGCGGGTTCTGCAC CCTGGATGGAGGGGGCCGATCCTGGGGAGCGGGTTCTGCAC < 41bp 0.838313153954748 0.634813533620653 0.93798655 0.9272249 prediction 0.406999240668189 Functional Loss - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4927253 chr17:4927255 nonsynonymous SNV 0.929 2 23 hm5C_associated_SNPs_95726 0 0 5 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:4927226-4927262
64251 chr16 68564096 68564096 1 + G A rs151037763 68564093 + 68564073 68564113 41 GTGGGTTTCGCGCCTTGCAACTCGACAACTGCCGGGACGGA GTGGGTTTCGCGCCTTGCAACTCAACAACTGCCGGGACGGA < 41bp 0.703499347226877 0.467432013973066 0.42547208 0.3018433 prediction 0.406998694453755 Functional Loss - SMPD3;ZFP90 ENSG00000184939 UTR5 Human protein_coding chr16:68564093 chr16:68564096 . . 0 24 hm5C_associated_SNPs_95727 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:68564096-68564097
64251 chr6 161470795 161470795 1 + C T UCEC 161470793 + 161470773 161470813 41 TATCCAAGAAGCTTGAGAGGCTCGAATCTGAGGATGATTCT TATCCAAGAAGCTTGAGAGGCTTGAATCTGAGGATGATTCT < 41bp 0.716858329824797 0.513366735274446 0.14518455 0.14655855 prediction 0.406983189100701 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161470793 chr6:161470795 synonymous SNV . 0 23 hm5C_associated_SNPs_95731 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:161470777-161470804
64251 chr1 201846356 201846356 1 + C T rs570519451 201846354 + 201846334 201846374 41 AATCATGGAGAGAGGCTGGGCGCGGTGGCTAACGCCTGTAA AATCATGGAGAGAGGCTGGGCGTGGTGGCTAACGCCTGTAA < 41bp 0.703485966371081 0.492110255731041 0.76194286 0.5696718 prediction 0.406971932742162 Functional Loss - IPO9 ENSG00000198700 UTR3 Human protein_coding chr1:201846354 chr1:201846356 . . 0 23 hm5C_associated_SNPs_95735 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:201846292-201846363
64251 chr5 71482516 71482516 1 + G T COAD 71482512 + 71482492 71482532 41 GGGCAGTGCTTTGAAAATACCGGAGAGCTCATTCTCCAGTC GGGCAGTGCTTTGAAAATACCGGATAGCTCATTCTCCAGTC < 41bp 0.725049302253432 0.521574480707916 0.7773584 0.27299896 prediction 0.406949643091033 Functional Loss - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71482512 chr5:71482516 stopgain 0.980 1 25 hm5C_associated_SNPs_95743 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71482443-71482574
64251 chr2 64688045 64688045 1 + G T rs182407525 64688043 + 64688023 64688063 41 GTATAAATAACAATCAGGCTCTGGGGGAATAGAAAGCAGGC GTATAAATAACAATCAGGCTCTTGGGGAATAGAAAGCAGGC < 41bp 0.703473983462134 0.43784219803824 0.32607704 0.1353369 prediction 0.406947966924268 Functional Loss - LGALSL ENSG00000119862 UTR3 Human protein_coding chr2:64688043 chr2:64688045 . . 0 23 hm5C_associated_SNPs_95747 0 0 7 MOV10 POSTAR2 GSE37524,GSM921128 chr2:64688023-64688046
64251 chr12 123892174 123892174 1 + C T UCEC 123892171 + 123892151 123892191 41 CATCGCCTCCCGAGACATCGCGGCTGGGGAGGAGCTCCTGT CATCGCCTCCCGAGACATCGCGGTTGGGGAGGAGCTCCTGT < 41bp 0.743507095831834 0.540033959211097 0.44542757 0.43664685 prediction 0.406946273241474 Functional Loss - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892171 chr12:123892174 nonsynonymous SNV 0.803 1 24 hm5C_associated_SNPs_95748 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:123892150-123892191
64251 chr9 131475921 131475921 1 + G T UCEC 131475919 + 131475899 131475939 41 CGCAGGGACTGCTTTTTGCCCAGGTGCTCACCACCTCCGCC CGCAGGGACTGCTTTTTGCCCATGTGCTCACCACCTCCGCC < 41bp 0.703472268805553 0.352083795095684 0.91869915 0.18603086 prediction 0.406944537611105 Functional Loss - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131475919 chr9:131475921 nonsynonymous SNV 0.957 1 23 hm5C_associated_SNPs_95751 0 0 2 DDX24 POSTAR2 ENCODE chr9:131475913-131475922
64251 chr2 198949938 198949938 1 + G A SKCM 198949935 + 198949915 198949955 41 AGATGAAGAAGCTGAAATGTCTCGAAGGATGTCGGTAGATT AGATGAAGAAGCTGAAATGTCTCAAAGGATGTCGGTAGATT < 41bp 0.703472085847725 0.468604869569237 0.88000536 0.6685845 prediction 0.40694417169545 Functional Loss - PLCL1 ENSG00000115896 CDS Human protein_coding chr2:198949935 chr2:198949938 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_95752 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:198949922-198949945
64251 chr8 145537690 145537690 1 + G A LUSC 145537687 + 145537667 145537707 41 CCCAGGAGCCCCCCAGGCCTCCCGAGGCAGAGAACAGCAGC CCCAGGAGCCCCCCAGGCCTCCCAAGGCAGAGAACAGCAGC < 41bp 0.816532162494384 0.613070466140121 0.40189672 0.22109237 prediction 0.406923392708527 Functional Loss - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537687 chr8:145537690 nonsynonymous SNV 0.954 0 24 hm5C_associated_SNPs_95761 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145537651-145537690
64251 chr1 1469362 1469362 1 + C T UCEC 1469360 + 1469340 1469380 41 CCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCAG CCGAGGCCATGATGGACACCCGTGTGCAAGATGCTGTCCAG < 41bp 0.825661427924092 0.622200264841688 0.45212108 0.39501503 prediction 0.406922326164809 Functional Loss - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1469360 chr1:1469362 synonymous SNV . 0 23 hm5C_associated_SNPs_95762 0 0 1 SERBP1 POSTAR2 ENCODE chr1:1469358-1469400
64251 chr11 65770735 65770735 1 + A C COAD 65770734 + 65770714 65770754 41 TGATCAAGATGACAACCTCCCAAAAGCACCGAGACTTCGTG TGATCAAGATGACAACCTCCCCAAAGCACCGAGACTTCGTG < 41bp 0.70346081721733 0.432324711570314 0.02971971 0.008147538 prediction 0.406921634434659 Functional Loss - BANF1 ENSG00000175334 CDS Human protein_coding chr11:65770734 chr11:65770735 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_95764 0 0 3 DDX55 POSTAR2 ENCODE chr11:65770705-65770789
64251 chr10 6259132 6259132 1 + C T LGG 6259129 + 6259109 6259149 41 CGAGTCGGTGTGCGACGACCCTACAGTTGTGGCCTCCAATA CGAGTCGGTGTGCGACGACCCTATAGTTGTGGCCTCCAATA < 41bp 0.78617199463507 0.582713085536898 0.28796524 0.06805906 prediction 0.406917818196344 Functional Loss - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6259129 chr10:6259132 nonsynonymous SNV 0.143 1 24 hm5C_associated_SNPs_95765 0 0 2 BUD13 POSTAR2 ENCODE chr10:6259060-6259132
64251 chr22 46685333 46685333 1 + C T COAD 46685331 + 46685311 46685351 41 GAACTGCCAGCACCTCCTGGCCCGAGACGTGGGGCTGCCCC GAACTGCCAGCACCTCCTGGCCTGAGACGTGGGGCTGCCCC < 41bp 0.703448917732265 0.41775145395381 0.43142053 0.2773642 prediction 0.406897835464529 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46685331 chr22:46685333 stopgain 0.053 0 23 hm5C_associated_SNPs_95775 0 0 2 RPS3 POSTAR2 ENCODE chr22:46685314-46685404
64251 chr13 113964005 113964005 1 + C T OV 113964003 + 113963983 113964023 41 ATGCCACAGTGGTGCTCAACCGCAGCTCCTGTGGAAAAGAG ATGCCACAGTGGTGCTCAACCGTAGCTCCTGTGGAAAAGAG < 41bp 0.703447367764774 0.424642982009128 0.34079686 0.33632421 prediction 0.406894735529548 Functional Loss - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113964003 chr13:113964005 synonymous SNV . 0 23 hm5C_associated_SNPs_95778 0 0 13 CPSF3 POSTAR2 GSE37401,GSM917669 chr13:113963985-113964008
64251 chr1 167341272 167341272 1 + G T LUAD 167341269 + 167341249 167341289 41 GCTAGCTGGAGGACAGATAACTGGGGTAAGTGTTCACTGAG GCTAGCTGGAGGACAGATAACTGTGGTAAGTGTTCACTGAG < 41bp 0.703447166959854 0.396906379509849 0.9100052 0.42083314 prediction 0.406894333919708 Functional Loss - POU2F1 ENSG00000143190 CDS Human protein_coding chr1:167341269 chr1:167341272 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95779 0 0 3 DDX24 POSTAR2 ENCODE chr1:167341165-167341274
64251 chr19 58864791 58864791 1 + C T UCEC 58864789 + 58864769 58864809 41 CCCCACAGCAAGAGAAAGACCACGAGCATGGACATGATGGT CCCCACAGCAAGAGAAAGACCATGAGCATGGACATGATGGT < 41bp 0.846737849335081 0.643291251054128 0.23237789 0.16105151 prediction 0.406893196561906 Functional Loss - A1BG ENSG00000121410 CDS Human protein_coding chr19:58864789 chr19:58864791 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_95780 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:58864778-58864816
64251 chr17 18087519 18087519 1 + G C rs574095180 18087518 + 18087498 18087538 41 AGAGCCATGCCCGGCTGCCCCGCCCGCCCCGGAGGACCCTA AGAGCCATGCCCGGCTGCCCCCCCCGCCCCGGAGGACCCTA < 41bp 0.703443882653668 0.492231770896554 0.061143696 0.050277174 prediction 0.406887765307336 Functional Loss - ALKBH5 ENSG00000266677 ncRNA_intronic Human antisense chr17:18087518 chr17:18087519 . . 0 22 hm5C_associated_SNPs_95782 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:18087497-18087536
64251 chr2 113956440 113956440 1 + G A SKCM 113956437 + 113956417 113956457 41 TTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTC TTCGTGCGGCCCATCCTGCCCGTAGGCCCCGCCCAGAGCTC < 41bp 0.703443336498921 0.443766710046562 0.34458768 0.19895485 prediction 0.406886672997841 Functional Loss - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113956437 chr2:113956440 synonymous SNV . 0 24 hm5C_associated_SNPs_95783 0 0 1 PPIG POSTAR2 ENCODE chr2:113956418-113956463
64251 chr11 111953367 111953367 1 + T C COAD 111953366 + 111953346 111953386 41 ACAGATATAACAGCAGATTCCTCGAGTGAGTTCTCAGAAGA ACAGATATAACAGCAGATTCCCCGAGTGAGTTCTCAGAAGA < 41bp 0.847007381619344 0.643564321416498 0.18482059 0.031051338 prediction 0.406886120405692 Functional Loss - C11orf57 ENSG00000150776 CDS Human protein_coding chr11:111953366 chr11:111953367 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_95785 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:111953344-111953375
64251 chr22 35719874 35719874 1 + C T LUSC 35719871 + 35719851 35719891 41 CTGCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGC CTGCCCGCCCCGCCCATACTCTCTGGTGACACGCCCATAGC < 41bp 0.764749190697353 0.561306721061774 0.21380818 0.11688241 prediction 0.406884939271159 Functional Loss - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719871 chr22:35719874 synonymous SNV 0.002 0 24 hm5C_associated_SNPs_95786 0 0 1 EFTUD2 POSTAR2 ENCODE chr22:35719822-35719897
64251 chr9 35675829 35675829 1 + C T SKCM 35675826 + 35675806 35675846 41 AGTCCCCGGTGGATATCCGCCCCCAGCTCGCCGCCTTCTGC AGTCCCCGGTGGATATCCGCCCCTAGCTCGCCGCCTTCTGC < 41bp 0.703441804104129 0.492029985640699 0.035072118 0.025852054 prediction 0.406883608208257 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675826 chr9:35675829 stopgain 0.092 0 24 hm5C_associated_SNPs_95787 0 0 1 RPS3 POSTAR2 ENCODE chr9:35675757-35675885
64251 chr9 35675828 35675828 1 + C T SKCM 35675826 + 35675806 35675846 41 AGTCCCCGGTGGATATCCGCCCCCAGCTCGCCGCCTTCTGC AGTCCCCGGTGGATATCCGCCCTCAGCTCGCCGCCTTCTGC < 41bp 0.703441804104129 0.427650431276141 0.035072118 0.09000164 prediction 0.406883608208257 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675826 chr9:35675828 synonymous SNV . 0 23 hm5C_associated_SNPs_95788 0 0 1 RPS3 POSTAR2 ENCODE chr9:35675757-35675885
64251 chr19 52090900 52090900 1 + G T UCEC 52090896 + 52090876 52090916 41 AGTCAACACTCAGCTTGCACCAGAGAATCCACTCAGGGCAG AGTCAACACTCAGCTTGCACCAGATAATCCACTCAGGGCAG < 41bp 0.709179932123386 0.505740850887669 0.5165327 0.85845524 prediction 0.406878162471434 Functional Loss - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090896 chr19:52090900 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_95789 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:52090900-52090920
64251 chr22 24034288 24034288 1 - A G rs738786 24034289 - 24034269 24034309 41 ACATTCTCTTCCCAAAGGCCCTGGAGCACAGCACTGTACAC ACATTCTCTTCCCAAAGGCCCCGGAGCACAGCACTGTACAC < 41bp 0.703438751446141 0.474041022716304 0.510439 0.8160206 prediction 0.406877502892282 Functional Loss - RGL4 ENSG00000159496 CDS Human protein_coding chr22:24034289 chr22:24034288 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_95790 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:24034240-24034294
64251 chr3 129238477 129238477 1 + G C LUSC 129238473 + 129238453 129238493 41 GTGCTGCGCTCCATGAGCCGCCGGGATGTCCTCATCAAGCG GTGCTGCGCTCCATGAGCCGCCGGCATGTCCTCATCAAGCG < 41bp 0.703436697637049 0.414143627959401 0.26669917 0.061361283 prediction 0.406873395274097 Functional Loss - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129238473 chr3:129238477 nonsynonymous SNV 0.989 2 25 hm5C_associated_SNPs_95791 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:129238460-129238491
64251 chr8 42878659 42878659 1 + G A rs141326870 42878656 + 42878636 42878676 41 CCCAGGCTGGAGTGCAGAGGCACGATCCTGGCTGACTGCAA CCCAGGCTGGAGTGCAGAGGCACAATCCTGGCTGACTGCAA < 41bp 0.716491188816853 0.513056086284046 0.40123254 0.24036106 prediction 0.406870205065614 Functional Loss - HOOK3 ENSG00000168172 UTR3 Human protein_coding chr8:42878656 chr8:42878659 . . 0 24 hm5C_associated_SNPs_95794 0 0 16 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:42878659-42878697
64251 chr1 165600492 165600492 1 + G C rs9333370 165600491 + 165600471 165600511 41 GCCGCACCCACACCGCGCTGCGCAGTTTTGTTCTGCTCCAG GCCGCACCCACACCGCGCTGCCCAGTTTTGTTCTGCTCCAG < 41bp 0.703432691428202 0.473319950005079 0.08584458 0.06930873 prediction 0.406865382856404 Functional Loss - MGST3 ENSG00000143198 UTR5 Human protein_coding chr1:165600491 chr1:165600492 . . 0 22 hm5C_associated_SNPs_95795 0 0 14 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:165600480-165600500
64251 chr9 139814868 139814868 1 + C T COAD 139814865 + 139814845 139814885 41 GCCACTTTTGAGAACATTGTCTGCGTCCTGAACCGGGAGGT GCCACTTTTGAGAACATTGTCTGTGTCCTGAACCGGGAGGT < 41bp 0.773285069468066 0.569854101306719 0.13685331 0.22046682 prediction 0.406861936322693 Functional Loss - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139814865 chr9:139814868 synonymous SNV . 0 24 hm5C_associated_SNPs_95796 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:139814816-139814884
64251 chr2 27663710 27663710 1 + G A UCEC 27663707 + 27663687 27663727 41 TCTGACAGCCTTTGGGCTGCCTCGGCCCCAGCAGCCACAGC TCTGACAGCCTTTGGGCTGCCTCAGCCCCAGCAGCCACAGC < 41bp 0.80327111014853 0.599843148673382 0.25029793 0.17490566 prediction 0.406855922950296 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27663707 chr2:27663710 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_95799 0 0 3 EFTUD2 POSTAR2 ENCODE chr2:27663618-27663710
64251 chr1 36766621 36766621 1 + G A CESC 36766618 + 36766598 36766638 41 CACCACGGGCTTTGACAAATCAAGACTGGGGACCAAAGACT CACCACGGGCTTTGACAAATCAAAACTGGGGACCAAAGACT < 41bp 0.799351043791344 0.595924323103268 0.35622898 0.24717608 prediction 0.406853441376151 Functional Loss - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36766618 chr1:36766621 nonsynonymous SNV 0.982 1 24 hm5C_associated_SNPs_95801 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:36766611-36766635
64251 chr5 167812240 167812240 1 + G A HNSC 167812237 + 167812217 167812257 41 AACCACTCAGATTGAGGATCCTCGAGTACAATGGCGGCGGG AACCACTCAGATTGAGGATCCTCAAGTACAATGGCGGCGGG < 41bp 0.805977248041379 0.602551949612553 0.68587744 0.8209553 prediction 0.406850596857652 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167812237 chr5:167812240 nonsynonymous SNV 0.359 4 24 hm5C_associated_SNPs_95805 0 0 2 GRWD1 POSTAR2 ENCODE chr5:167812215-167812364
64251 chr14 72169126 72169126 1 + T C GBM 72169125 + 72169105 72169145 41 GTGAGCCGTAGATCCCCAGCCTCCATTGACAGGCAGAACAC GTGAGCCGTAGATCCCCAGCCCCCATTGACAGGCAGAACAC < 41bp 0.703418116733543 0.407029049668877 0.9531575 0.051100224 prediction 0.406836233467086 Functional Loss - SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72169125 chr14:72169126 nonsynonymous SNV 0.948 0 22 hm5C_associated_SNPs_95807 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:72169096-72169134
64251 chr1 212793520 212793520 1 + G A rs142921239 212793517 + 212793497 212793537 41 TTGGGGGGCGGGGCTGTCACCACGTGCAGTATCTCAAGATA TTGGGGGGCGGGGCTGTCACCACATGCAGTATCTCAAGATA < 41bp 0.794510198697599 0.591099512777375 0.85535455 0.90744424 prediction 0.406821371840447 Functional Loss - ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793517 chr1:212793520 . . 0 24 hm5C_associated_SNPs_95813 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:212793490-212793523
64251 chr9 131395557 131395557 1 + G A UCEC 131395554 + 131395534 131395574 41 CCTACGTGGACGGCAAGGGCCGCGAGCTCCCCACCGCGTTC CCTACGTGGACGGCAAGGGCCGCAAGCTCCCCACCGCGTTC < 41bp 0.77115730682339 0.567748966011151 0.6449652 0.24590087 prediction 0.406816681624477 Functional Loss - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131395554 chr9:131395557 nonsynonymous SNV 0.346 3 24 hm5C_associated_SNPs_95816 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:131395556-131395557
64251 chr16 8735035 8735035 1 + T C LIHC 8735034 + 8735014 8735054 41 GACTGGCTGAAGGACGACCTCTGCACAGGTGTGTGTTTCTC GACTGGCTGAAGGACGACCTCCGCACAGGTGTGTGTTTCTC < 41bp 0.844820809366394 0.641416567583924 0.5391552 0.28477472 prediction 0.406808483564939 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8735034 chr16:8735035 nonsynonymous SNV 0.954 1 22 hm5C_associated_SNPs_95817 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8734998-8735039
64251 chr4 139966175 139966175 1 + C T COAD 139966172 + 139966152 139966192 41 AAGGAGTCAGGCCGACAGTTCTGCATCGCTGTTACCCATCT AAGGAGTCAGGCCGACAGTTCTGTATCGCTGTTACCCATCT < 41bp 0.782559631300318 0.579161593538578 0.18567836 0.020840675 prediction 0.40679607552348 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966172 chr4:139966175 synonymous SNV . 0 24 hm5C_associated_SNPs_95822 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:139966167-139966177
64251 chr12 6627032 6627032 1 + G T LUAD 6627028 + 6627008 6627048 41 AGCAGCTTCTACAGCTTCCCCAGGGAGAGGAGGAGATTCCT AGCAGCTTCTACAGCTTCCCCAGGTAGAGGAGGAGATTCCT < 41bp 0.703397067722541 0.489658778912601 0.64977026 0.5039686 prediction 0.406794135445082 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6627028 chr12:6627032 nonsynonymous SNV 0.660 1 25 hm5C_associated_SNPs_95823 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:6626994-6627042
64251 chr17 40936448 40936448 1 + G A UCEC 40936445 + 40936425 40936465 41 CTGTGGACCCTACAGGGACCCCGGAATTCATGGCCCCCGAG CTGTGGACCCTACAGGGACCCCGAAATTCATGGCCCCCGAG < 41bp 0.703395277404841 0.449384871921473 0.7634999 0.31849608 prediction 0.406790554809683 Functional Loss - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40936445 chr17:40936448 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_95826 0 0 1 SRSF1 POSTAR2 ENCODE chr17:40936443-40936483
64251 chr11 63965337 63965337 1 + G A UCEC 63965334 + 63965314 63965354 41 TTTCTTTATCAGAGCATATGCTCGAATTGGCAACTCCTACT TTTCTTTATCAGAGCATATGCTCAAATTGGCAACTCCTACT < 41bp 0.809167026104745 0.605771956073081 0.16663086 0.09343669 prediction 0.406790140063328 Functional Loss - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63965334 chr11:63965337 nonsynonymous SNV 0.943 4 24 hm5C_associated_SNPs_95827 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:63965300-63965340
64251 chr6 27115006 27115006 1 + C T rs574703856 27115004 + 27114984 27115024 41 TCCCCGTGGGCCGAGTGCACCGCCTGCTCCGCAAGGGTAAT TCCCCGTGGGCCGAGTGCACCGTCTGCTCCGCAAGGGTAAT < 41bp 0.703394072854367 0.460588700000877 0.040961355 0.06775311 prediction 0.406788145708734 Functional Loss - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115004 chr6:27115006 synonymous SNV . 0 23 hm5C_associated_SNPs_95828 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27114964-27115114
64251 chrX 47104264 47104264 1 + T C SKCM 47104263 + 47104243 47104283 41 GACGCAAGCAGCTGTTCACCCTGCAGACGGTGAACTCCAAT GACGCAAGCAGCTGTTCACCCCGCAGACGGTGAACTCCAAT < 41bp 0.852066441870748 0.648675178067601 0.68841374 0.30918807 prediction 0.406782527606295 Functional Loss - USP11 ENSG00000102226 CDS Human protein_coding chrX:47104263 chrX:47104264 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_95832 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chrX:47104260-47104280
64251 chr1 150484155 150484155 1 + A T UCEC 150484151 + 150484131 150484171 41 GTGCCCACATTGGACAATATCAAGAACATCTGCCACCTGAG GTGCCCACATTGGACAATATCAAGTACATCTGCCACCTGAG < 41bp 0.899745128980828 0.696355103923007 0.9275422 0.84423983 prediction 0.406780050115644 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484151 chr1:150484155 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_95834 0 0 2 RBM15 POSTAR2 ENCODE chr1:150484103-150484159
64251 chr3 52836473 52836473 1 + G T UCEC 52836469 + 52836449 52836489 41 TTCTACGATGGCTCTGAGATCGTGGTGGCCGGGCGCCTGGT TTCTACGATGGCTCTGAGATCGTGTTGGCCGGGCGCCTGGT < 41bp 0.753796299862461 0.550406490410869 0.9034773 0.4284429 prediction 0.406779618903185 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836469 chr3:52836473 nonsynonymous SNV 0.962 4 25 hm5C_associated_SNPs_95835 0 0 2 LIN28B POSTAR2 ENCODE chr3:52836461-52836502
64251 chr1 245006381 245006381 1 - A G GBM 245006382 - 245006362 245006402 41 TCTTCTCTGGCAATTCTTTCCTGGATTCTTTGCTTTGCATA TCTTCTCTGGCAATTCTTTCCCGGATTCTTTGCTTTGCATA < 41bp 0.758666300714187 0.55527922109785 0.32823765 0.5278782 prediction 0.406774159232674 Functional Loss - COX20 ENSG00000203667 CDS Human protein_coding chr1:245006382 chr1:245006381 nonsynonymous SNV 0.969 0 22 hm5C_associated_SNPs_95836 0 0 1 TIA1 POSTAR2 ENCODE chr1:245006334-245006395
64251 chr10 127412441 127412441 1 + G T TGCT 127412439 + 127412419 127412459 41 CACGTGAGCATGGCAGTACACCGCATAGGAAGGACTCTCTT CACGTGAGCATGGCAGTACACCTCATAGGAAGGACTCTCTT < 41bp 0.703386895657254 0.370357857084829 0.08671492 0.09676707 prediction 0.406773791314508 Functional Loss - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127412439 chr10:127412441 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_95837 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr10:127412424-127412448
64251 chr2 176988765 176988765 1 + C T rs35649704 176988762 + 176988742 176988782 41 CTGGAGAAAGAATTCCTCTTCAACATGTACCTCACCCGGGA CTGGAGAAAGAATTCCTCTTCAATATGTACCTCACCCGGGA < 41bp 0.731117454652034 0.527731172852161 0.12178466 0.23648125 prediction 0.406772563599746 Functional Loss - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988762 chr2:176988765 synonymous SNV . 0 24 hm5C_associated_SNPs_95839 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:176988737-176988773
64251 chr9 99220816 99220816 1 + G A UCEC 99220813 + 99220793 99220833 41 ACTTCACAGCTGAGAAGTTTCCAGATGAAAAGTATGTGCTG ACTTCACAGCTGAGAAGTTTCCAAATGAAAAGTATGTGCTG < 41bp 0.823641057310967 0.620266543969224 0.86298835 0.6550224 prediction 0.406749026683487 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99220813 chr9:99220816 nonsynonymous SNV 0.270 0 24 hm5C_associated_SNPs_95850 0 0 1 EFTUD2 POSTAR2 ENCODE chr9:99220795-99220850
64251 chr12 133682816 133682816 1 + G A UCEC 133682813 + 133682793 133682833 41 TCGCCGTTTCTCACACCTTACTCGACATCAGAGCATCCATA TCGCCGTTTCTCACACCTTACTCAACATCAGAGCATCCATA < 41bp 0.703373569099554 0.456840805698782 0.09271881 0.0769918 prediction 0.406747138199108 Functional Loss - ZNF140 ENSG00000196387 CDS Human protein_coding chr12:133682813 chr12:133682816 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_95853 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:133682798-133682823
64251 chr2 178977514 178977514 1 + A C LUSC 178977513 + 178977493 178977533 41 GCCCGCAGCTCACAGGCCTGCAGGGCCATGGAGGAGATGCA GCCCGCAGCTCACAGGCCTGCCGGGCCATGGAGGAGATGCA < 41bp 0.841082566729457 0.637709065914949 0.7225936 0.37734744 prediction 0.406747001629018 Functional Loss - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977513 chr2:178977514 synonymous SNV . 0 22 hm5C_associated_SNPs_95854 0 0 1 GRWD1 POSTAR2 ENCODE chr2:178977376-178977552
64251 chr6 28097318 28097318 1 + C T UCEC 28097315 + 28097295 28097335 41 GACTGAACAAAGATACTCCTCAGCATCCTAAGTCCAAAGAT GACTGAACAAAGATACTCCTCAGTATCCTAAGTCCAAAGAT < 41bp 0.70337269683503 0.494604192923832 0.15279332 0.12965295 prediction 0.406745393670059 Functional Loss - ZSCAN16 ENSG00000196812 CDS Human protein_coding chr6:28097315 chr6:28097318 nonsynonymous SNV 0.354 0 24 hm5C_associated_SNPs_95855 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28097275-28097323
64251 chr20 4168220 4168220 1 + T C rs369951923 4168219 + 4168199 4168239 41 GCCCTGTAGCTTTTCTTTTTCTCCAGGCTGGGCCGTGAGCA GCCCTGTAGCTTTTCTTTTTCCCCAGGCTGGGCCGTGAGCA < 41bp 0.797454682951337 0.594082556336594 0.9129492 0.2894613 prediction 0.406744253229485 Functional Loss - SMOX ENSG00000088826 UTR3 Human protein_coding chr20:4168219 chr20:4168220 . . 0 22 hm5C_associated_SNPs_95857 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:4168209-4168247
64251 chr9 126794835 126794835 1 + C T BLCA 126794833 + 126794813 126794853 41 GCCTCGGAGCTCTCCAACGCCTCGCTCAGCCCCTCCAGCAC GCCTCGGAGCTCTCCAACGCCTTGCTCAGCCCCTCCAGCAC < 41bp 0.703370768036823 0.436740645892158 0.090605825 0.08465633 prediction 0.406741536073646 Functional Loss - LHX2 ENSG00000106689 CDS Human protein_coding chr9:126794833 chr9:126794835 nonsynonymous SNV 0.993 5 23 hm5C_associated_SNPs_95859 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:126794813-126794865
64251 chr9 91934645 91934645 1 + G T UCEC 91934643 + 91934623 91934663 41 TGTGGCATGGTTAGAGTCCTCAGAAGCATGTGTCTTCCCCA TGTGGCATGGTTAGAGTCCTCATAAGCATGTGTCTTCCCCA < 41bp 0.882599970173777 0.67923018215423 0.7377206 0.29973406 prediction 0.406739576039095 Functional Loss - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91934643 chr9:91934645 stopgain 0.979 2 23 hm5C_associated_SNPs_95861 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:91934564-91934650
64251 chr1 246810601 246810601 1 + C T UCEC 246810598 + 246810578 246810618 41 CACATGGAGGAGCTGCTCTGCAGCGCTGAAGCCACGTTAGC CACATGGAGGAGCTGCTCTGCAGTGCTGAAGCCACGTTAGC < 41bp 0.703369673739899 0.492724326399594 0.22984734 0.28643566 prediction 0.406739347479799 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246810598 chr1:246810601 synonymous SNV . 0 24 hm5C_associated_SNPs_95862 0 0 1 RBM15 POSTAR2 ENCODE chr1:246810557-246810604
64251 chr17 34068112 34068112 1 + C T UCEC 34068109 + 34068089 34068129 41 TGGGCAACAAGCGGGACCTGCAGCGCGGACGCGTGATCCCG TGGGCAACAAGCGGGACCTGCAGTGCGGACGCGTGATCCCG < 41bp 0.703360048847013 0.496037571664984 0.36899975 0.21144703 prediction 0.406720097694025 Functional Loss - RASL10B ENSG00000141150 CDS Human other chr17:34068109 chr17:34068112 nonsynonymous SNV 0.975 2 24 hm5C_associated_SNPs_95868 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:34068097-34068121
64251 chr7 128498752 128498752 1 + G T rs190543911 128498748 + 128498728 128498768 41 CTCCCCACCCCACCGCGCCCCAGGGGTTGGAGGACCTTGTC CTCCCCACCCCACCGCGCCCCAGGTGTTGGAGGACCTTGTC < 41bp 0.732166373866933 0.528806486868702 0.9233191 0.7837346 prediction 0.406719773996461 Functional Loss - FLNC ENSG00000242902 ncRNA_intronic Human antisense chr7:128498748 chr7:128498752 . . 0 25 hm5C_associated_SNPs_95870 0 0 4 AGGF1 POSTAR2 ENCODE chr7:128498705-128498762
64251 chr20 12989951 12989951 1 + G A OV 12989948 + 12989928 12989968 41 GGAGGTGGTGCTGTTTGCAACGGGAAACTTCACAATCACAA GGAGGTGGTGCTGTTTGCAACGGAAAACTTCACAATCACAA < 41bp 0.793100988031248 0.589743530060359 0.2962389 0.19485724 prediction 0.406714915941779 Functional Loss - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:12989948 chr20:12989951 synonymous SNV . 0 24 hm5C_associated_SNPs_95873 0 0 2 GRWD1 POSTAR2 ENCODE chr20:12989876-12990016
64251 chr16 66643845 66643845 1 + C T GBM 66643842 + 66643822 66643862 41 GATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAA GATTTCTACCTGATCTTTAACGATGTGGCCAAATTCCTCAA < 41bp 0.745495174242789 0.54214021116151 0.8745123 0.5440278 prediction 0.406709926162559 Functional Loss - CMTM3 ENSG00000140931 CDS Human protein_coding chr16:66643842 chr16:66643845 synonymous SNV . 0 24 hm5C_associated_SNPs_95875 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:66643839-66643862
64251 chr19 9271256 9271256 1 + G T LUAD 9271254 + 9271234 9271274 41 CCTTACAAGTGTGATCAGTGCGGGAAGGCTTACGGCCGGAG CCTTACAAGTGTGATCAGTGCGTGAAGGCTTACGGCCGGAG < 41bp 0.916579542850366 0.713228639476382 0.84568256 0.18168989 prediction 0.406701806747969 Functional Loss - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271254 chr19:9271256 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_95881 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:9271249-9271292
64251 chr16 71884021 71884021 1 + A C rs6499544 71884017 + 71883997 71884037 41 ACATCCAGGCATCCACTATCCTCCACTCCACTATGCTCAGC ACATCCAGGCATCCACTATCCTCCCCTCCACTATGCTCAGC < 41bp 0.70335045583158 0.272218012010537 0.8530038 0.071187586 prediction 0.406700911663161 Functional Loss - ATXN1L ENSG00000224470 CDS Human protein_coding chr16:71884017 chr16:71884021 synonymous SNV . 0 25 hm5C_associated_SNPs_95882 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:71883977-71884030
64251 chr12 7311091 7311091 1 + G T rs373798355 7311088 + 7311068 7311108 41 CTTCCCTTCTCTCTCCTGTCCATGGGAAGCTTTTCCCCCTC CTTCCCTTCTCTCTCCTGTCCATTGGAAGCTTTTCCCCCTC < 41bp 0.703349897637359 0.312821133384505 0.8205395 0.42609742 prediction 0.406699795274718 Functional Loss - CLSTN3 ENSG00000139182 UTR3 Human protein_coding chr12:7311088 chr12:7311091 . . 0 24 hm5C_associated_SNPs_95884 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr12:7311044-7311097
64251 chr18 72183561 72183561 1 + G T LUAD 72183558 + 72183538 72183578 41 GGGGCCAAGACCGTGATTCCCAGGAAGGTGGTTGGCAAGTT GGGGCCAAGACCGTGATTCCCAGTAAGGTGGTTGGCAAGTT < 41bp 0.940410969920905 0.737065383505706 0.90112245 0.22389123 prediction 0.406691172830398 Functional Loss - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72183558 chr18:72183561 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_95888 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:72183536-72183567
64251 chr4 76730164 76730164 1 + A T SKCM 76730160 + 76730140 76730180 41 AATCTGTGGAGATCACCAAACTACAGACAGAAAAGCAGGAA AATCTGTGGAGATCACCAAACTACTGACAGAAAAGCAGGAA < 41bp 0.703344599826353 0.354391293741855 0.103859395 0.15426764 prediction 0.406689199652706 Functional Loss - USO1 ENSG00000138768 CDS Human protein_coding chr4:76730160 chr4:76730164 nonsynonymous SNV 0.800 1 25 hm5C_associated_SNPs_95890 0 0 4 DDX24 POSTAR2 ENCODE chr4:76730149-76730182
64251 chr17 49365435 49365435 1 + C T BLCA 49365433 + 49365413 49365453 41 TATACAATCAAGATTCTTGTCTCCAAGAAACAAACCCAAAG TATACAATCAAGATTCTTGTCTTCAAGAAACAAACCCAAAG < 41bp 0.703338500665821 0.393968866554019 0.9556482 0.099630564 prediction 0.406677001331642 Functional Loss - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49365433 chr17:49365435 synonymous SNV . 0 23 hm5C_associated_SNPs_95896 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:49365394-49365443
64251 chrX 129055406 129055406 1 + A T LIHC 129055404 + 129055384 129055424 41 AGGAGGACCCTGAGCAACTGCCAGAGCTTGAGGCCCATGGA AGGAGGACCCTGAGCAACTGCCTGAGCTTGAGGCCCATGGA < 41bp 0.703338487660479 0.489618830194679 0.5651547 0.15869996 prediction 0.406676975320958 Functional Loss - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129055404 chrX:129055406 synonymous SNV . 0 23 hm5C_associated_SNPs_95897 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:129055379-129055411
64251 chr20 34131349 34131349 1 + G A rs143478136 34131346 + 34131326 34131366 41 ACAGCAAACTGTCCTCAAAGCTGGGATTTCTAACACCTTAG ACAGCAAACTGTCCTCAAAGCTGAGATTTCTAACACCTTAG < 41bp 0.70333754611322 0.479487228847794 0.44512886 0.0958294 prediction 0.406675092226441 Functional Loss - ERGIC3 ENSG00000125991 intronic Human protein_coding chr20:34131346 chr20:34131349 . . 0 24 hm5C_associated_SNPs_95898 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:34131339-34131366
64251 chr17 30349540 30349540 1 + A T LUSC 30349536 + 30349516 30349556 41 CTTGCCATAACTCCAGAACCCACTACAGAGATTGGACATTC CTTGCCATAACTCCAGAACCCACTTCAGAGATTGGACATTC < 41bp 0.70333384754611 0.390964549725374 0.30528352 0.08927184 prediction 0.40666769509222 Functional Loss - LRRC37B ENSG00000185158 CDS Human protein_coding chr17:30349536 chr17:30349540 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_95900 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:30349507-30349543
64251 chr20 3016353 3016353 1 + C T SARC 3016350 + 3016330 3016370 41 CGAGACCTCCTGGTCACCAACACCAGGGTAAGATGGGTCGT CGAGACCTCCTGGTCACCAACACTAGGGTAAGATGGGTCGT < 41bp 0.797619942327077 0.594295980927346 0.44218913 0.28343037 prediction 0.406647922799461 Functional Loss - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3016350 chr20:3016353 synonymous SNV . 0 24 hm5C_associated_SNPs_95911 0 0 1 PPIG POSTAR2 ENCODE chr20:3016293-3016355
64251 chr6 42902286 42902286 1 + G A LGG 42902283 + 42902263 42902303 41 AAGACCAAGGAGGTGATTGGCACGGGCTATGGCATCCTGGA AAGACCAAGGAGGTGATTGGCACAGGCTATGGCATCCTGGA < 41bp 0.806846869024923 0.603523490759488 0.9162682 0.84339535 prediction 0.406646756530869 Functional Loss - CNPY3 ENSG00000137161 CDS Human protein_coding chr6:42902283 chr6:42902286 synonymous SNV . 0 24 hm5C_associated_SNPs_95912 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:42902216-42902290
64251 chr4 40356138 40356138 1 + G A UCEC 40356135 + 40356115 40356155 41 GTCATCCTGAAATACATGTCCAGGGTCTTGTTTGTCTATGA GTCATCCTGAAATACATGTCCAGAGTCTTGTTTGTCTATGA < 41bp 0.798829573573594 0.59550644224069 0.7291648 0.4621411 prediction 0.406646262665809 Functional Loss - CHRNA9 ENSG00000174343 CDS Human protein_coding chr4:40356135 chr4:40356138 synonymous SNV . 0 24 hm5C_associated_SNPs_95913 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:40356126-40356164
64251 chr16 69681336 69681336 1 + G A LIHC 69681333 + 69681313 69681353 41 CACTGAGGTACCTCGTAAATCACGAAAACGAAATCCAAAGC CACTGAGGTACCTCGTAAATCACAAAAACGAAATCCAAAGC < 41bp 0.778139890960388 0.574818251994578 0.4125061 0.21971846 prediction 0.406643277931618 Functional Loss - NFAT5 ENSG00000102908 CDS Human protein_coding chr16:69681333 chr16:69681336 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95914 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr16:69681317-69681338
64251 chr6 88046811 88046811 1 + A C KIRP 88046810 + 88046790 88046830 41 CACCCAAAGAGAAAGAGTTTCAAAGCCCAGGGCTCAGAGGG CACCCAAAGAGAAAGAGTTTCCAAGCCCAGGGCTCAGAGGG < 41bp 0.703319152982129 0.436876712210396 0.16941932 0.12172493 prediction 0.406638305964258 Functional Loss - SMIM8 ENSG00000111850;ENSG00000226524 CDS Human other chr6:88046810 chr6:88046811 nonsynonymous SNV 0.993 0 22 hm5C_associated_SNPs_95916 0 0 1 GRWD1 POSTAR2 ENCODE chr6:88046743-88046880
64251 chr22 41922373 41922373 1 + C T OV 41922370 + 41922350 41922390 41 AACCTGCTCATTGGTGCCATCAACATTGAAAACGGCAAGGC AACCTGCTCATTGGTGCCATCAATATTGAAAACGGCAAGGC < 41bp 0.703318963014124 0.478277831070222 0.1176236 0.1149095 prediction 0.406637926028248 Functional Loss - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41922370 chr22:41922373 synonymous SNV . 0 24 hm5C_associated_SNPs_95917 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:41922373-41922374
64251 chr11 12261110 12261110 1 + G A UCEC 12261107 + 12261087 12261127 41 GGCCAAGTTTGAGGAGAGCACTCGGAACCCCTCACTCATGA GGCCAAGTTTGAGGAGAGCACTCAGAACCCCTCACTCATGA < 41bp 0.703316359182345 0.468637725129504 0.14339343 0.06299275 prediction 0.406632718364691 Functional Loss - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12261107 chr11:12261110 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_95919 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr11:12261107-12261132
64251 chr11 123483529 123483529 1 + G A UCEC 123483526 + 123483506 123483546 41 GGGTTAGTGAAAACGTTCATCGAGAAGAACTTCTGGAGTGG GGGTTAGTGAAAACGTTCATCGAAAAGAACTTCTGGAGTGG < 41bp 0.821310639907459 0.617995417754714 0.7590625 0.40589368 prediction 0.40663044430549 Functional Loss - GRAMD1B ENSG00000023171 CDS Human protein_coding chr11:123483526 chr11:123483529 synonymous SNV . 0 24 hm5C_associated_SNPs_95921 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr11:123483520-123483540
64251 chr5 150856257 150856257 1 + G T LUSC 150856253 + 150856233 150856273 41 TCTACATCAGCCTGGGGTGTCTGGGGTACCTGCAATTTGGA TCTACATCAGCCTGGGGTGTCTGGTGTACCTGCAATTTGGA < 41bp 0.736718263339714 0.533405483099784 0.8939713 0.49759322 prediction 0.406625560479861 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150856253 chr5:150856257 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_95923 0 0 2 PPIG POSTAR2 ENCODE chr5:150856157-150856281
64251 chr4 38698816 38698816 1 + G A LUAD 38698813 + 38698793 38698833 41 GAATCAAACCTTTCCAGTGCCCGGACTGTGACCGCAGCTTC GAATCAAACCTTTCCAGTGCCCGAACTGTGACCGCAGCTTC < 41bp 0.70330841936619 0.49336191519026 0.21228796 0.047333658 prediction 0.406616838732381 Functional Loss - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38698813 chr4:38698816 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_95927 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:38698800-38698820
64251 chr1 201969060 201969060 1 + C T COAD 201969057 + 201969037 201969077 41 GTACACCTGCTTGGAGGCTGCAACGGGGCGGGCTCTGCTGC GTACACCTGCTTGGAGGCTGCAATGGGGCGGGCTCTGCTGC < 41bp 0.743727709924654 0.540421158832261 0.44696113 0.43181768 prediction 0.406613102184786 Functional Loss - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201969057 chr1:201969060 nonsynonymous SNV 0.760 3 24 hm5C_associated_SNPs_95929 0 0 2 DDX6 POSTAR2 ENCODE chr1:201969034-201969079
64251 chr3 100042849 100042849 1 + A T rs1214372 100042845 + 100042825 100042865 41 AAGGGAACATGCATCACTTTCGGGATCAAAAACAACTGTAC AAGGGAACATGCATCACTTTCGGGTTCAAAAACAACTGTAC < 41bp 0.888686727404291 0.685383078161243 0.90094924 0.8922312 prediction 0.406607298486096 Functional Loss - TBC1D23 ENSG00000036054 UTR3 Human protein_coding chr3:100042845 chr3:100042849 . . 0 25 hm5C_associated_SNPs_95931 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704216 chr3:100042838-100042859
64251 chr16 30953566 30953566 1 + G T UCEC 30953563 + 30953543 30953583 41 CTCAGCTGGACAGGTGTCTCCAAGAAGCAGCTCATGTGGCT CTCAGCTGGACAGGTGTCTCCAATAAGCAGCTCATGTGGCT < 41bp 0.703297903625288 0.318615263920525 0.8242402 0.11476439 prediction 0.406595807250577 Functional Loss - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30953563 chr16:30953566 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95936 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:30953540-30953566
64251 chr12 49742769 49742769 1 + G T LUSC 49742767 + 49742747 49742787 41 CCCTGCTCTGGATGCTGACCCTGGGGGGAGGTGGGCTGGGC CCCTGCTCTGGATGCTGACCCTTGGGGGAGGTGGGCTGGGC < 41bp 0.920935960847477 0.717639230806937 0.84947526 0.28980732 prediction 0.406593460081079 Functional Loss - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742767 chr12:49742769 synonymous SNV . 0 23 hm5C_associated_SNPs_95938 0 0 3 DDX3X POSTAR2 ENCODE chr12:49742746-49742806
64251 chr17 48797172 48797172 1 + G T LUSC 48797168 + 48797148 48797188 41 GCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGA GCCCCGGACGAGAAGCGCAGCAACTTGCGGTGGGACCACGA < 41bp 0.704442838822648 0.501148502647344 0.37023613 0.45598218 prediction 0.406588672350608 Functional Loss - LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48797168 chr17:48797172 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_95941 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:48797080-48797183
64251 chr1 151373292 151373292 1 + G A UCEC 151373289 + 151373269 151373309 41 TAGCCTATGAAGCCCCTTCGCTGGCCACTGGTTATGGTGCA TAGCCTATGAAGCCCCTTCGCTGACCACTGGTTATGGTGCA < 41bp 0.799740768912447 0.596447981922506 0.16094762 0.091739595 prediction 0.406585573979882 Functional Loss - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151373289 chr1:151373292 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95944 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151373237-151373310
64251 chr3 63982027 63982027 1 + G A LIHC 63982024 + 63982004 63982044 41 AAAAGAAAGTGCTCACCCAGCTCGAGCAGCATCAACAACAG AAAAGAAAGTGCTCACCCAGCTCAAGCAGCATCAACAACAG < 41bp 0.782450758505167 0.579159312675232 0.11000574 0.03259471 prediction 0.406582891659868 Functional Loss - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63982024 chr3:63982027 synonymous SNV . 0 24 hm5C_associated_SNPs_95945 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:63981994-63982030
64251 chr1 40627211 40627211 1 + C T SKCM 40627209 + 40627189 40627229 41 GTATCTCCAGCGCCGGGAGCCTCGGGACTGCGGCCGTGTCT GTATCTCCAGCGCCGGGAGCCTTGGGACTGCGGCCGTGTCT < 41bp 0.830527765750542 0.627237997578051 0.51926804 0.5170931 prediction 0.406579536344982 Functional Loss - RLF ENSG00000117000 CDS Human protein_coding chr1:40627209 chr1:40627211 nonsynonymous SNV 0.428 0 23 hm5C_associated_SNPs_95947 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr1:40627205-40627228
64251 chr19 15784426 15784426 1 + G A UCEC 15784423 + 15784403 15784443 41 CTGCTGCTGGTTGTGGGCTCCTGGCTACTCGCCCGCATCCT CTGCTGCTGGTTGTGGGCTCCTGACTACTCGCCCGCATCCT < 41bp 0.703283980533681 0.44528155338742 0.5305486 0.30025256 prediction 0.406567961067362 Functional Loss - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784423 chr19:15784426 stopgain 0.014 0 24 hm5C_associated_SNPs_95949 0 0 2 DDX3X POSTAR2 ENCODE chr19:15784344-15784448
64251 chr14 65209083 65209083 1 + C T UCEC 65209080 + 65209060 65209100 41 CAGTGATGGCCAGGCCACCACTGCAGTGGGAAAAGGTGGCC CAGTGATGGCCAGGCCACCACTGTAGTGGGAAAAGGTGGCC < 41bp 0.761039329973582 0.557756084575581 0.38017136 0.23234907 prediction 0.406566490796003 Functional Loss - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65209080 chr14:65209083 stopgain 0.004 0 24 hm5C_associated_SNPs_95950 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:65209083-65209121
64251 chr16 70162917 70162917 1 + C T SKCM 70162914 + 70162894 70162934 41 CCAAGAAAGTGGCCGAGCTTCACCATCTCCTCAACGTGCAC CCAAGAAAGTGGCCGAGCTTCACTATCTCCTCAACGTGCAC < 41bp 0.749976915044865 0.54669376945518 0.025529653 0.041068196 prediction 0.40656629117937 Functional Loss - PDPR ENSG00000090857 CDS Human protein_coding chr16:70162914 chr16:70162917 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_95951 0 0 1 DDX24 POSTAR2 ENCODE chr16:70162906-70162999
64251 chr22 35819296 35819296 1 + G A UCEC 35819293 + 35819273 35819313 41 GCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAGCATC GCCGCTTTGCCATTGGCTCCCAGATGTCTGAGCACAGCATC < 41bp 0.800101346775625 0.596822286764706 0.9174298 0.8744043 prediction 0.406558120021839 Functional Loss - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35819293 chr22:35819296 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_95955 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:35819262-35819326
64251 chr10 43882562 43882562 1 - G A STAD 43882565 - 43882545 43882585 41 AGTGATGGCTACGGCTTCACCACCGACCTGTTCGGGAGAGA AGTGATGGCTACGGCTTCACCACTGACCTGTTCGGGAGAGA < 41bp 0.786778145439368 0.583509137997891 0.13669232 0.09722367 prediction 0.406538014882954 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882565 chr10:43882562 synonymous SNV . 0 24 hm5C_associated_SNPs_95964 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882456-43882580
64251 chr19 44590038 44590038 1 + G A UCEC 44590035 + 44590015 44590055 41 TGTCCCCTCCCAGGTTGACGCAGGACTATCTATAATTCACA TGTCCCCTCCCAGGTTGACGCAGAACTATCTATAATTCACA < 41bp 0.804881556135828 0.601612853235177 0.8826463 0.5821136 prediction 0.406537405801302 Functional Loss - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44590035 chr19:44590038 nonsynonymous SNV 0.035 0 24 hm5C_associated_SNPs_95965 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44590008-44590040
64251 chr3 9959647 9959647 1 + T C SKCM 9959646 + 9959626 9959666 41 GCCTGGGGACATCGTGCCTGCTCCGGGCCCCGTGCTGGCGC GCCTGGGGACATCGTGCCTGCCCCGGGCCCCGTGCTGGCGC < 41bp 0.823291546623724 0.620025082375031 0.2310488 0.116910994 prediction 0.406532928497385 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9959646 chr3:9959647 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_95966 0 0 4 DDX3X POSTAR2 ENCODE chr3:9959616-9959675
64251 chr17 34893860 34893860 1 + G A LUAD 34893857 + 34893837 34893877 41 TTGGTCTATTAAATGCCAACCGCGAAGGAATAATCTCTACC TTGGTCTATTAAATGCCAACCGCAAAGGAATAATCTCTACC < 41bp 0.802290420003299 0.599026036298514 0.27248144 0.14445311 prediction 0.406528767409569 Functional Loss - PIGW ENSG00000184886 CDS Human other chr17:34893857 chr17:34893860 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_95969 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:34893827-34893860
64251 chr4 187112792 187112792 1 + C T rs559737524 187112790 + 187112770 187112810 41 CGGGCCGGGCGCAGGAACAGCCCCGTGGCGCCCTCTCTGGC CGGGCCGGGCGCAGGAACAGCCTCGTGGCGCCCTCTCTGGC < 41bp 0.703263911136931 0.49320674811064 0.31005543 0.27555013 prediction 0.406527822273862 Functional Loss - CYP4V2 ENSG00000145476 UTR5 Human protein_coding chr4:187112790 chr4:187112792 . . 0 23 hm5C_associated_SNPs_95970 0 0 1 DDX3X POSTAR2 ENCODE chr4:187112772-187112881
64251 chr6 26468327 26468327 1 + G T LUSC 26468324 + 26468304 26468344 41 AGTCAGCCTTGTGTCCTAGGCCGGGAGAGCTTCGCTTCAGG AGTCAGCCTTGTGTCCTAGGCCGTGAGAGCTTCGCTTCAGG < 41bp 0.703250446348691 0.301344372971882 0.87977326 0.2684496 prediction 0.406500892697382 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468324 chr6:26468327 synonymous SNV . 0 24 hm5C_associated_SNPs_95979 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr6:26468307-26468334
64251 chr11 61545288 61545288 1 + C T UCEC 61545286 + 61545266 61545306 41 AAGCCCGAGTTCGCCGCCAGCGCGGGCATCGAGGCCACCGC AAGCCCGAGTTCGCCGCCAGCGTGGGCATCGAGGCCACCGC < 41bp 0.845425550013645 0.6421765393133 0.90309775 0.9047583 prediction 0.406498021400689 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61545286 chr11:61545288 nonsynonymous SNV 0.670 1 23 hm5C_associated_SNPs_95981 0 0 5 GRWD1 POSTAR2 ENCODE chr11:61545231-61545306
64251 chr10 101611589 101611589 1 + C T rs150176505 101611587 + 101611567 101611607 41 GAAACCCCTCGATTGTCTACCTCGATCGTACTTCCTTGCTA GAAACCCCTCGATTGTCTACCTTGATCGTACTTCCTTGCTA < 41bp 0.755136788382792 0.551890072322445 0.41981235 0.14446652 prediction 0.406493432120695 Functional Loss - ABCC2 ENSG00000023839 UTR3 Human protein_coding chr10:101611587 chr10:101611589 . . 0 23 hm5C_associated_SNPs_95982 0 0 2 IGF2BP3 POSTAR2 ENCODE chr10:101611585-101611646
64251 chr13 31835157 31835157 1 + T C THCA 31835156 + 31835136 31835176 41 TTATGCCTTTTCCGAGAATCCTACAGTTTTTAAGTATCCAG TTATGCCTTTTCCGAGAATCCCACAGTTTTTAAGTATCCAG < 41bp 0.703244891693952 0.433211775913391 0.4006664 0.077498496 prediction 0.406489783387905 Functional Loss - B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31835156 chr13:31835157 synonymous SNV . 0 22 hm5C_associated_SNPs_95985 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:31835138-31835176
64251 chr13 31848657 31848657 1 + C T rs35019745 31848654 + 31848634 31848674 41 GTCTCGTGGCAGATTGCCCTCTACATCTGGGACAAAGGCGG GTCTCGTGGCAGATTGCCCTCTATATCTGGGACAAAGGCGG < 41bp 0.780941037200014 0.577698761759029 0.30846846 0.21084166 prediction 0.406484550881971 Functional Loss - B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31848654 chr13:31848657 synonymous SNV . 0 24 hm5C_associated_SNPs_95989 1 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr13:31848657-31848658
64251 chr5 145838663 145838663 1 + G A PAAD 145838660 + 145838640 145838680 41 CCCAGGCCCAGGCCCAGGCCCAGGCCCAGGCCCAAGCCCAA CCCAGGCCCAGGCCCAGGCCCAGACCCAGGCCCAAGCCCAA < 41bp 0.827385230039466 0.624144142958681 0.3373158 0.15097365 prediction 0.40648217416157 Functional Loss - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838660 chr5:145838663 nonsynonymous SNV 0.030 1 24 hm5C_associated_SNPs_95991 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr15 90611620 90611620 1 + C T SKCM 90611617 + 90611597 90611637 41 GTCGAGTGCGGCCTGGACTTCTCCACCCTGACCCAGCTCAA GTCGAGTGCGGCCTGGACTTCTCTACCCTGACCCAGCTCAA < 41bp 0.762313554628857 0.559072906015114 0.92105746 0.43264532 prediction 0.406481297227486 Functional Loss - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90611617 chr15:90611620 synonymous SNV . 0 24 hm5C_associated_SNPs_95992 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90611595-90611633
64251 chr1 897301 897301 1 + G T KIRC 897299 + 897279 897319 41 AGCTCGACCCCTCCAACTGCCTGGGTATCCGGGGCTTTGCC AGCTCGACCCCTCCAACTGCCTTGGTATCCGGGGCTTTGCC < 41bp 0.703237123156763 0.341519818814519 0.65396893 0.21613717 prediction 0.406474246313526 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897299 chr1:897301 synonymous SNV . 0 23 hm5C_associated_SNPs_95993 0 0 2 GRWD1 POSTAR2 ENCODE chr1:897285-897345
64251 chr1 897302 897302 1 + G T KIRC 897299 + 897279 897319 41 AGCTCGACCCCTCCAACTGCCTGGGTATCCGGGGCTTTGCC AGCTCGACCCCTCCAACTGCCTGTGTATCCGGGGCTTTGCC < 41bp 0.703237123156763 0.297673951591503 0.65396893 0.050836444 prediction 0.406474246313526 Functional Loss - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:897299 chr1:897302 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_95994 0 0 2 GRWD1 POSTAR2 ENCODE chr1:897285-897345
64251 chr11 46725907 46725907 1 + T C COAD 46725906 + 46725886 46725926 41 CCATCCTTGCCTTGCAGATCCTGGTTCCCAGTCACCCTCTG CCATCCTTGCCTTGCAGATCCCGGTTCCCAGTCACCCTCTG < 41bp 0.703232422274321 0.482970192179384 0.17900696 0.23878622 prediction 0.406464844548642 Functional Loss - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46725906 chr11:46725907 synonymous SNV . 0 22 hm5C_associated_SNPs_95998 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:46725888-46725911
64251 chr9 35606965 35606965 1 + C T GBM 35606963 + 35606943 35606983 41 ACTCCAAAGGTGTATTTCACCGCGACCTCACATCCAAGGTA ACTCCAAAGGTGTATTTCACCGTGACCTCACATCCAAGGTA < 41bp 0.861556834884865 0.658326469285862 0.4548946 0.32684267 prediction 0.406460731198008 Functional Loss - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35606963 chr9:35606965 synonymous SNV . 0 23 hm5C_associated_SNPs_95999 0 0 3 AARS POSTAR2 ENCODE chr9:35606922-35606967
64251 chrX 69521843 69521843 1 + G T SARC 69521839 + 69521819 69521859 41 AACTCTAGGACTGTGGCCTCCACGGCTATGAACTCCCAGTC AACTCTAGGACTGTGGCCTCCACGTCTATGAACTCCCAGTC < 41bp 0.734662972885692 0.531432724297992 0.26424697 0.14454156 prediction 0.4064604971754 Functional Loss - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69521839 chrX:69521843 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_96000 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:69521821-69521845
64251 chr10 60560022 60560022 1 + C T UCEC 60560020 + 60560000 60560040 41 AAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAG AAAAAGTGCTGAGTGCAAATCATGGGGATCCGTCCATCCAG < 41bp 0.865827566331041 0.662607639466012 0.9132375 0.8824909 prediction 0.406439853730058 Functional Loss - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60560020 chr10:60560022 synonymous SNV . 0 23 hm5C_associated_SNPs_96007 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60559991-60560054
64251 chr10 98742215 98742215 1 + G T UCEC 98742213 + 98742193 98742233 41 CGGAGGAGATGAGTGTACCCCAGGACTGTCACCTCCTTCCC CGGAGGAGATGAGTGTACCCCATGACTGTCACCTCCTTCCC < 41bp 0.912867022923707 0.709649251393164 0.92393386 0.14906019 prediction 0.406435543061085 Functional Loss - LCOR ENSG00000155640 CDS Human other chr10:98742213 chr10:98742215 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_96008 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:98742139-98742284
64251 chrX 70444181 70444181 1 + G A GBM 70444178 + 70444158 70444198 41 TGCATCATCCTCAATGTGGCCGAGGTGGTGTACCTCATCAT TGCATCATCCTCAATGTGGCCGAAGTGGTGTACCTCATCAT < 41bp 0.82867397404584 0.625456826443856 0.9096867 0.6694864 prediction 0.406434295203968 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444178 chrX:70444181 synonymous SNV . 0 24 hm5C_associated_SNPs_96010 0 0 2 SND1 POSTAR2 ENCODE chrX:70444165-70444234
64251 chr20 1145118 1145118 1 + C T COAD 1145116 + 1145096 1145136 41 GACCCATTGGGACCAGCCCACCCGGGTACGTAGTCACTCAG GACCCATTGGGACCAGCCCACCTGGGTACGTAGTCACTCAG < 41bp 0.703214776517058 0.430709676786744 0.33958328 0.30070508 prediction 0.406429553034116 Functional Loss - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1145116 chr20:1145118 synonymous SNV . 0 23 hm5C_associated_SNPs_96012 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:1145091-1145119
64251 chr17 73819525 73819525 1 + C T rs8078208 73819522 + 73819502 73819542 41 CCCCAGGCCCTGCCCGCCTTCTCCGACCTGGAGGCGCTCTC CCCCAGGCCCTGCCCGCCTTCTCTGACCTGGAGGCGCTCTC < 41bp 0.793686970314068 0.590472506755036 0.8534247 0.51260984 prediction 0.406428927118064 Functional Loss - UNK ENSG00000132478 CDS Human protein_coding chr17:73819522 chr17:73819525 synonymous SNV . 0 24 hm5C_associated_SNPs_96013 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73819520-73819540
64251 chr16 11769984 11769984 1 + G A UCEC 11769981 + 11769961 11770001 41 ATCGTCATCCTCATTGCCATCGCGGCCCTGGGGGCCTTGAT ATCGTCATCCTCATTGCCATCGCAGCCCTGGGGGCCTTGAT < 41bp 0.813382507815404 0.610173036123899 0.7041091 0.38275552 prediction 0.40641894338301 Functional Loss - SNN ENSG00000184602 CDS Human protein_coding chr16:11769981 chr16:11769984 synonymous SNV . 0 24 hm5C_associated_SNPs_96019 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:11769974-11770012
64251 chr15 68473579 68473579 1 + C T UCEC 68473576 + 68473556 68473596 41 AAGTCTTCCACATCAAGCATCTCCAGTATCCCGCACCCCAA AAGTCTTCCACATCAAGCATCTCTAGTATCCCGCACCCCAA < 41bp 0.703208992743698 0.464848476377008 0.95231867 0.63483626 prediction 0.406417985487396 Functional Loss - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68473576 chr15:68473579 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_96021 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:68473563-68473581
64251 chr1 67685299 67685299 1 + G T STAD 67685297 + 67685277 67685317 41 TTTTACATATGTGCAACAGTCAGAATTCTACTTGGAGCCAA TTTTACATATGTGCAACAGTCATAATTCTACTTGGAGCCAA < 41bp 0.703207009842487 0.413705519841887 0.30656785 0.09491265 prediction 0.406414019684974 Functional Loss - IL23R ENSG00000162594 CDS Human protein_coding chr1:67685297 chr1:67685299 stopgain 0.996 0 23 hm5C_associated_SNPs_96022 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:67685256-67685326
64251 chr5 154330496 154330496 1 + G T GBM 154330494 + 154330474 154330514 41 GCCTGGAGAACCTCGGAGACCAGCAGTAAGTTCGTGGGTAG GCCTGGAGAACCTCGGAGACCATCAGTAAGTTCGTGGGTAG < 41bp 0.905621914306019 0.702415041229175 0.9099571 0.2410757 prediction 0.406413746153688 Functional Loss - MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154330494 chr5:154330496 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_96023 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:154330459-154330499
64251 chr1 164529112 164529112 1 + G A UCEC 164529109 + 164529089 164529129 41 CCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCC CCATGCTGGGGTCGGGATGGCCGAACACCCCGGCCTGTCCC < 41bp 0.805874580699023 0.602668093640284 0.89921516 0.52172565 prediction 0.406412974117477 Functional Loss - PBX1 ENSG00000185630 CDS Human protein_coding chr1:164529109 chr1:164529112 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_96025 0 0 1 DGCR8 POSTAR2 ENCODE chr1:164529094-164529117
64251 chr6 30881130 30881130 1 + G A STAD 30881127 + 30881107 30881147 41 ATCACCGACCAGATCCGGCTCTGGGAGCTGGAAAGGGACAG ATCACCGACCAGATCCGGCTCTGAGAGCTGGAAAGGGACAG < 41bp 0.712480147592552 0.509277347111165 0.36222088 0.23673692 prediction 0.406405600962773 Functional Loss - GTF2H4 ENSG00000213780 CDS Human protein_coding chr6:30881127 chr6:30881130 stopgain 1.000 0 24 hm5C_associated_SNPs_96028 0 0 7 BUD13 POSTAR2 ENCODE chr6:30881042-30881147
64251 chr15 90771435 90771435 1 + A C rs113037639 90771431 + 90771411 90771451 41 GATGAGGGTGGCAGTGTACCCGTCATTATCAGCACATCGCG GATGAGGGTGGCAGTGTACCCGTCCTTATCAGCACATCGCG < 41bp 0.703195753337407 0.297380170841501 0.09774476 0.10690671 prediction 0.406391506674813 Functional Loss - SEMA4B ENSG00000185033 CDS Human protein_coding chr15:90771431 chr15:90771435 nonsynonymous SNV 0.034 0 25 hm5C_associated_SNPs_96033 0 0 1 SF3B1 POSTAR2 ENCODE chr15:90771403-90771436
64251 chr7 5086025 5086025 1 + A C rs562359843 5086021 + 5086001 5086041 41 GGGCAGAGGCTGCGGAGCCCCAGAAGGGTAGGTCTTGGGTT GGGCAGAGGCTGCGGAGCCCCAGACGGGTAGGTCTTGGGTT < 41bp 0.845057707124224 0.641864868182332 0.32079685 0.34429115 prediction 0.406385677883784 Functional Loss - RBAK ENSG00000146587 UTR5 Human protein_coding chr7:5086021 chr7:5086025 . . 0 25 hm5C_associated_SNPs_96035 0 0 2 PRPF8 POSTAR2 ENCODE chr7:5086013-5086063
64251 chr19 36259764 36259764 1 + C T rs548618432 36259762 + 36259742 36259782 41 TGGACCAAAGGACTGCCCTCCACGGAGGAAGCTACTAGGGT TGGACCAAAGGACTGCCCTCCATGGAGGAAGCTACTAGGGT < 41bp 0.703189258354958 0.482714089189054 0.62348014 0.2579491 prediction 0.406378516709915 Functional Loss - PROSER3 ENSG00000167595 UTR3 Human protein_coding chr19:36259762 chr19:36259764 . . 0 23 hm5C_associated_SNPs_96039 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:36259656-36259816
64251 chr17 4442575 4442575 1 - C G rs375238587 4442576 - 4442556 4442596 41 CTGGGGAGGGTGGCTGTTGCCGCCTGCCCGGGCATCCTGCT CTGGGGAGGGTGGCTGTTGCCCCCTGCCCGGGCATCCTGCT < 41bp 0.703187199623667 0.393176515996941 0.208006 0.025198787 prediction 0.406374399247334 Functional Loss - MYBBP1A ENSG00000132382 UTR3 Human protein_coding chr17:4442576 chr17:4442575 . . 0 22 hm5C_associated_SNPs_96041 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4442553-4442579
64251 chr11 607998 607998 1 + G A LUSC 607995 + 607975 608015 41 CCAGCGCCCCTGGCAGCAGCCCCGAGAGGTCTGGCCCCGGC CCAGCGCCCCTGGCAGCAGCCCCAAGAGGTCTGGCCCCGGC < 41bp 0.815308597825341 0.612121963750166 0.13978049 0.19905764 prediction 0.40637326815035 Functional Loss - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607995 chr11:607998 nonsynonymous SNV 0.052 5 24 hm5C_associated_SNPs_96042 0 0 2 FMR1 POSTAR2 ENCODE chr11:607966-608008
64251 chr4 158257696 158257696 1 + G A LUSC 158257693 + 158257673 158257713 41 GATCCTTTAGCCTATGAGATCTGGATGTGCATTGTTTTTGC GATCCTTTAGCCTATGAGATCTGAATGTGCATTGTTTTTGC < 41bp 0.77816233945685 0.574977406259894 0.26254013 0.09263098 prediction 0.406369866393912 Functional Loss - GRIA2 ENSG00000120251 CDS Human protein_coding chr4:158257693 chr4:158257696 stopgain 1.000 1 24 hm5C_associated_SNPs_96044 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:158257680-158257700
64251 chr15 69745186 69745186 1 + C T LIHC 69745184 + 69745164 69745204 41 CCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAGGAAGCT CCTCAGCTGCCGCCAAGGTGCTTGGTCCTTCCGAGGAAGCT < 41bp 0.775399844107522 0.572220517742033 0.33198655 0.11656129 prediction 0.406358652730979 Functional Loss - RPLP1 ENSG00000137818 UTR5 Human protein_coding chr15:69745184 chr15:69745186 . . 0 23 hm5C_associated_SNPs_96050 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:69745169-69745192
64251 chr3 47446215 47446215 1 + T C LIHC 47446214 + 47446194 47446234 41 ACCTCGGCCAGCTTCATTACCTGCAGAGTCGGGTCCCCATG ACCTCGGCCAGCTTCATTACCCGCAGAGTCGGGTCCCCATG < 41bp 0.840795012968873 0.637616918246436 0.36909604 0.12887171 prediction 0.406356189444875 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47446214 chr3:47446215 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_96052 0 0 2 GRWD1 POSTAR2 ENCODE chr3:47446205-47446253
64251 chr17 27009838 27009838 1 + C T STAD 27009835 + 27009815 27009855 41 GCACGAGACAGAGCAGTTTCCCGCGGAGCCCTTGGAGCTGG GCACGAGACAGAGCAGTTTCCCGTGGAGCCCTTGGAGCTGG < 41bp 0.762407728655009 0.559231409512757 0.85679555 0.37451744 prediction 0.406352638284505 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27009835 chr17:27009838 nonsynonymous SNV 0.740 1 24 hm5C_associated_SNPs_96053 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:27009819-27009866
64251 chr11 102220663 102220663 1 + G A UCEC 102220660 + 102220640 102220680 41 AAGAGTATAATGGAAGATAGCACGATCTTGTCAGATTGGAC AAGAGTATAATGGAAGATAGCACAATCTTGTCAGATTGGAC < 41bp 0.764719289737084 0.561550815110714 0.02636975 0.022470236 prediction 0.406336949252739 Functional Loss - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102220660 chr11:102220663 synonymous SNV . 0 24 hm5C_associated_SNPs_96055 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:102220641-102220681
64251 chr17 1649065 1649065 1 + G A CESC 1649062 + 1649042 1649082 41 TCTGCAGCAGAGACCCCACCCCAGAGCAGACCCACAGGCTG TCTGCAGCAGAGACCCCACCCCAAAGCAGACCCACAGGCTG < 41bp 0.703167182506468 0.456267971025351 0.29817045 0.15804261 prediction 0.406334365012936 Functional Loss - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1649062 chr17:1649065 nonsynonymous SNV 0.008 1 24 hm5C_associated_SNPs_96060 0 0 1 SND1 POSTAR2 ENCODE chr17:1649040-1649092
64251 chr7 21940794 21940794 1 - C A COAD 21940797 - 21940777 21940817 41 TCGCTCTTCAGCCTGAAGGTCCAGATGTAGCTGGGGCCTCT TCGCTCTTCAGCCTGAAGGTCCATATGTAGCTGGGGCCTCT < 41bp 0.703165014287452 0.35563658371322 0.23249859 0.025311083 prediction 0.406330028574905 Functional Loss - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21940797 chr7:21940794 synonymous SNV . 0 24 hm5C_associated_SNPs_96062 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:21940773-21940798
64251 chr17 7605837 7605837 1 + C T UCEC 7605835 + 7605815 7605855 41 TCACCCACCTCTGCTTTCATCCCGATGGCAACCGCTTCTTC TCACCCACCTCTGCTTTCATCCTGATGGCAACCGCTTCTTC < 41bp 0.856279916388445 0.653115019645831 0.77839124 0.33617067 prediction 0.406329793485228 Functional Loss - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7605835 chr17:7605837 synonymous SNV . 0 23 hm5C_associated_SNPs_96063 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7605828-7605863
64251 chr3 12610400 12610400 1 + A C rs200877703 12610396 + 12610376 12610416 41 ATTTTATGCATGGTGTGTGTCGGGAAGGAAGTCAGTGCCTA ATTTTATGCATGGTGTGTGTCGGGCAGGAAGTCAGTGCCTA < 41bp 0.940459224521265 0.737295536127311 0.89616656 0.7906015 prediction 0.406327376787907 Functional Loss - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12610396 chr3:12610400 nonsynonymous SNV 0.925 4 25 hm5C_associated_SNPs_96064 0 0 21 FUS POSTAR2 DRA001158,DRS012384 chr3:12610370-12610416
64251 chr17 17697199 17697199 1 + C T HNSC 17697196 + 17697176 17697216 41 ACCAAAACCTCGCCAAGTATCAGCACTACGGGCAGCAAGGC ACCAAAACCTCGCCAAGTATCAGTACTACGGGCAGCAAGGC < 41bp 0.720628321246696 0.517470724095979 0.90302044 0.4494782 prediction 0.406315194301434 Functional Loss - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697196 chr17:17697199 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_96070 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:17697198-17697200
64251 chr9 117026664 117026664 1 + G T KIRC 117026660 + 117026640 117026680 41 CCGAGGACCGGACGGACCAGCTGGGGAGCAAGGGTCCAGGG CCGAGGACCGGACGGACCAGCTGGTGAGCAAGGGTCCAGGG < 41bp 0.711911195897306 0.508759787013137 0.80072594 0.69955957 prediction 0.406302817768338 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117026660 chr9:117026664 synonymous SNV . 0 25 hm5C_associated_SNPs_96074 0 0 10 BUD13 POSTAR2 ENCODE chr9:117026645-117026688
64251 chr11 61511849 61511849 1 + C T UCEC 61511847 + 61511827 61511867 41 GAGCTCATGGACCTGACGCCCACGGGCCTCAGTAGCCAGGA GAGCTCATGGACCTGACGCCCATGGGCCTCAGTAGCCAGGA < 41bp 0.703148190176721 0.444670224034368 0.14183125 0.08868417 prediction 0.406296380353443 Functional Loss - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61511847 chr11:61511849 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_96076 0 0 2 IGF2BP1 POSTAR2 ENCODE chr11:61511778-61511871
64251 chr17 18793182 18793182 1 + G A CESC 18793179 + 18793159 18793199 41 ATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGTAGGTGGG ATCGTGGCCAAGTCTCCAGCCTCAGCGAAGAGGTAGGTGGG < 41bp 0.703147758684409 0.452071872639892 0.5319173 0.2788803 prediction 0.406295517368817 Functional Loss - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18793179 chr17:18793182 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_96077 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr17:18793156-18793185
64251 chr7 75511532 75511532 1 + C T UCEC 75511529 + 75511509 75511549 41 ACCTCTTTCCTCAGTAATGTCTGCGGGCTGTCCATCGGGCT ACCTCTTTCCTCAGTAATGTCTGTGGGCTGTCCATCGGGCT < 41bp 0.747817471181316 0.544672302312538 0.28630027 0.25568932 prediction 0.406290337737555 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75511529 chr7:75511532 synonymous SNV . 0 24 hm5C_associated_SNPs_96080 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75511525-75511555
64251 chrX 135291466 135291466 1 + C T GBM 135291464 + 135291444 135291484 41 CTAGGAAGCCCCCAGTGTGCCACGGGAAACGCTTGCCTCTC CTAGGAAGCCCCCAGTGTGCCATGGGAAACGCTTGCCTCTC < 41bp 0.828526763238575 0.625384569050004 0.74421155 0.77386683 prediction 0.406284388377143 Functional Loss - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135291464 chrX:135291466 synonymous SNV . 0 23 hm5C_associated_SNPs_96081 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:135291440-135291478
64251 chr5 52370271 52370271 1 + C T UCEC 52370268 + 52370248 52370288 41 GCATCTCAGAAGTCTGTTGCCTGCGATGTAGGCTACCCTGC GCATCTCAGAAGTCTGTTGCCTGTGATGTAGGCTACCCTGC < 41bp 0.755389605233734 0.552247877976975 0.5317637 0.35100526 prediction 0.406283454513517 Functional Loss - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52370268 chr5:52370271 synonymous SNV . 0 24 hm5C_associated_SNPs_96083 0 0 3 BUD13 POSTAR2 ENCODE chr5:52370190-52370284
64251 chr20 19870220 19870220 1 + C T UCEC 19870217 + 19870197 19870237 41 TCTCTACCTTCAGGAGTCCCCGGCGTGCAGTGGAGCCTCGC TCTCTACCTTCAGGAGTCCCCGGTGTGCAGTGGAGCCTCGC < 41bp 0.759314127019902 0.556174681329408 0.8654554 0.82794785 prediction 0.406278891380988 Functional Loss - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19870217 chr20:19870220 nonsynonymous SNV 0.111 1 24 hm5C_associated_SNPs_96085 0 0 1 SF3A3 POSTAR2 ENCODE chr20:19870177-19870223
64251 chr13 24466084 24466084 1 + C T SKCM 24466081 + 24466061 24466101 41 CTGCCCCTGAGGCCCAGTCTCTCCTCGGAGGCCTTTCTCTC CTGCCCCTGAGGCCCAGTCTCTCTTCGGAGGCCTTTCTCTC < 41bp 0.744104845553095 0.540965426423375 0.06129265 0.07044047 prediction 0.406278838259439 Functional Loss - C1QTNF9B ENSG00000205863 CDS Human protein_coding chr13:24466081 chr13:24466084 nonsynonymous SNV 0.320 5 24 hm5C_associated_SNPs_96086 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:24466077-24466117
64251 chr11 212920 212920 1 + G A UCEC 212917 + 212897 212937 41 GCCTCATGGCAGGAGGCCGGCCCGAGGGCCAGTACTCAGAG GCCTCATGGCAGGAGGCCGGCCCAAGGGCCAGTACTCAGAG < 41bp 0.818179483741235 0.615040882820137 0.87751406 0.8475654 prediction 0.406277201842196 Functional Loss - RIC8A ENSG00000177963 CDS Human protein_coding chr11:212917 chr11:212920 nonsynonymous SNV 0.975 1 24 hm5C_associated_SNPs_96087 0 0 4 EFTUD2 POSTAR2 ENCODE chr11:212901-212943
64251 chr1 27269437 27269437 1 + C T HNSC 27269434 + 27269414 27269454 41 TGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGGGG TGGACATCCAGCGGCGGCACCTCTGGGTGGGGCTCAAGGGG < 41bp 0.703138362332441 0.466955569545469 0.68916225 0.23331514 prediction 0.406276724664882 Functional Loss - NUDC ENSG00000090273 CDS Human protein_coding chr1:27269434 chr1:27269437 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_96088 0 0 16 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:27269416-27269442
64251 chr1 27269436 27269436 1 + C T SKCM 27269434 + 27269414 27269454 41 TGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGGGG TGGACATCCAGCGGCGGCACCTTCGGGTGGGGCTCAAGGGG < 41bp 0.703138362332441 0.403947411427849 0.68916225 0.31959862 prediction 0.406276724664882 Functional Loss - NUDC ENSG00000090273 CDS Human protein_coding chr1:27269434 chr1:27269436 synonymous SNV . 0 23 hm5C_associated_SNPs_96089 0 0 16 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:27269416-27269442
64251 chr2 27259421 27259421 1 + G A UCEC 27259418 + 27259398 27259438 41 GTCTCACCATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCC GTCTCACCATCATGTGGGCCCTGAGTCAAGCAGGTTTTGCC < 41bp 0.70312890050754 0.450039137583411 0.24202141 0.1639581 prediction 0.40625780101508 Functional Loss - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27259418 chr2:27259421 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_96098 0 0 2 PPIG POSTAR2 ENCODE chr2:27259409-27259453
64251 chr1 150444379 150444379 1 + G A BRCA 150444376 + 150444356 150444396 41 CAGAACACCCTTGCCGCTCCCACGGGTCACCCACCCACGTC CAGAACACCCTTGCCGCTCCCACAGGTCACCCACCCACGTC < 41bp 0.833956353506985 0.630830900456645 0.9074128 0.37063333 prediction 0.406250906100679 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150444376 chr1:150444379 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_96101 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:150444358-150444396
64251 chr1 12061536 12061536 1 + G T UCEC 12061532 + 12061512 12061552 41 GTGGTGGATCGATCCCAGGCCGGGGACCGCATCTTCTTTGT GTGGTGGATCGATCCCAGGCCGGGTACCGCATCTTCTTTGT < 41bp 0.761896315365509 0.558773910993403 0.89104843 0.7944343 prediction 0.406244808744213 Functional Loss - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061532 chr1:12061536 nonsynonymous SNV 0.848 3 25 hm5C_associated_SNPs_96103 0 0 1 FXR2 POSTAR2 ENCODE chr1:12061494-12061561
64251 chr16 1825361 1825361 1 + G A CESC 1825358 + 1825338 1825378 41 GGGACACAGCAGCCAGAGAGCCCGAAGGTGGCCGGTGCCGA GGGACACAGCAGCCAGAGAGCCCAAAGGTGGCCGGTGCCGA < 41bp 0.824148774201944 0.621036266169688 0.36151722 0.19852757 prediction 0.406225016064513 Functional Loss - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825358 chr16:1825361 synonymous SNV . 0 24 hm5C_associated_SNPs_96112 0 0 8 BUD13 POSTAR2 ENCODE chr16:1825267-1825385
64251 chr1 19923557 19923557 1 + C T UCEC 19923555 + 19923535 19923575 41 GGAACATGTCTGAGTCGGAGCTCGGCAGGAAGTGGGACCGG GGAACATGTCTGAGTCGGAGCTTGGCAGGAAGTGGGACCGG < 41bp 0.795783178608063 0.592681849097713 0.2994405 0.33036876 prediction 0.406202659020699 Functional Loss - MINOS1 ENSG00000173436 CDS Human protein_coding chr1:19923555 chr1:19923557 synonymous SNV . 0 23 hm5C_associated_SNPs_96118 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:19923480-19923580
64251 chr19 3381902 3381902 1 + C T STAD 3381900 + 3381880 3381920 41 GGTCAAGCAGAAGTGGGCGTCGCGGCTGCTGGCCAAGCTGC GGTCAAGCAGAAGTGGGCGTCGTGGCTGCTGGCCAAGCTGC < 41bp 0.837518612144485 0.634420071067056 0.8612391 0.8046864 prediction 0.406197082154856 Functional Loss - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381900 chr19:3381902 nonsynonymous SNV 0.871 4 23 hm5C_associated_SNPs_96121 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:3381898-3381915
64251 chr1 55197222 55197222 1 + G T UCEC 55197219 + 55197199 55197239 41 AAGATTCAGCCTCAGAAGGTCTAGGTGAGCTTTTCCTGGAT AAGATTCAGCCTCAGAAGGTCTATGTGAGCTTTTCCTGGAT < 41bp 0.703095402112366 0.299517148307577 0.29616797 0.05457005 prediction 0.406190804224732 Functional Loss - TTC4 ENSG00000243725 CDS Human protein_coding chr1:55197219 chr1:55197222 nonsynonymous SNV 0.740 1 24 hm5C_associated_SNPs_96123 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:55197184-55197222
64251 chr18 77894587 77894587 1 + C T LGG 77894584 + 77894564 77894604 41 CCTCTGTCACCCCTGGGGTCCTGCAGGCTGTCTCGCCAGGG CCTCTGTCACCCCTGGGGTCCTGTAGGCTGTCTCGCCAGGG < 41bp 0.703095127911347 0.479459460402786 0.54228413 0.42601553 prediction 0.406190255822695 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894584 chr18:77894587 stopgain 0.543 1 24 hm5C_associated_SNPs_96124 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:77894557-77894593
64251 chr6 116747842 116747842 1 + G T TGCT 116747840 + 116747820 116747860 41 ACTACCTGAGCAAGACACAACAGGAGAAGTTTCTTGAAGTG ACTACCTGAGCAAGACACAACATGAGAAGTTTCTTGAAGTG < 41bp 0.703095100804507 0.36318505498346 0.82899094 0.14804274 prediction 0.406190201609014 Functional Loss - DSE ENSG00000111817 CDS Human protein_coding chr6:116747840 chr6:116747842 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_96125 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:116747815-116747842
64251 chr5 150838458 150838458 1 + G T LUSC 150838456 + 150838436 150838476 41 GCCTCAACAACCTCTCCTCCCCGGGCTCCTACCAGCGCTTT GCCTCAACAACCTCTCCTCCCCTGGCTCCTACCAGCGCTTT < 41bp 0.703092754900086 0.324133871463522 0.78300023 0.04794413 prediction 0.406185509800173 Functional Loss - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838456 chr5:150838458 synonymous SNV . 0 23 hm5C_associated_SNPs_96127 0 0 1 ZNF622 POSTAR2 ENCODE chr5:150838383-150838492
64251 chr2 233321734 233321734 1 + G A ESCA 233321731 + 233321711 233321751 41 GCCCGCTTTAACCAGTGCAACACGACACGCGGCAATGAGGT GCCCGCTTTAACCAGTGCAACACAACACGCGGCAATGAGGT < 41bp 0.703085334404414 0.454217340613615 0.16418457 0.15420353 prediction 0.406170668808827 Functional Loss - ALPI ENSG00000163295 CDS Human protein_coding chr2:233321731 chr2:233321734 synonymous SNV . 0 24 hm5C_associated_SNPs_96133 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:233321720-233321760
64251 chr17 65665757 65665757 1 + G A LUAD 65665754 + 65665734 65665774 41 TGAGGTCTGGGGGCTTCAGACCAGAGTGGAACAATTTGTAC TGAGGTCTGGGGGCTTCAGACCAAAGTGGAACAATTTGTAC < 41bp 0.703082326971875 0.467709055929112 0.13465112 0.06604269 prediction 0.40616465394375 Functional Loss - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65665754 chr17:65665757 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_96136 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:65665732-65665757
64251 chr19 20046147 20046147 1 + G A rs1048421 20046144 + 20046124 20046164 41 CAGACCCAGCAACCTTGTGACCAGGCTAAAACCCCTCATCA CAGACCCAGCAACCTTGTGACCAAGCTAAAACCCCTCATCA < 41bp 0.727964146657349 0.524884026570942 0.45033282 0.17747408 prediction 0.406160240172812 Functional Loss - ZNF93 ENSG00000267268 ncRNA_intronic Human lincRNA chr19:20046144 chr19:20046147 . . 0 24 hm5C_associated_SNPs_96139 0 0 1 ZNF622 POSTAR2 ENCODE chr19:20046144-20046220
64251 chr20 10277646 10277646 1 + C T COAD 10277644 + 10277624 10277664 41 AGTGGTGGCCAGCCAGCCTGCTCGTGTAGTGGACGAACGGG AGTGGTGGCCAGCCAGCCTGCTTGTGTAGTGGACGAACGGG < 41bp 0.86362436786353 0.660545725614108 0.33848682 0.35633028 prediction 0.406157284498843 Functional Loss - SNAP25 ENSG00000132639 CDS Human protein_coding chr20:10277644 chr20:10277646 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_96142 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:10277640-10277660
64251 chrX 2609256 2609256 1 + G A rs745413803 2609253 + 2609233 2609273 41 CCGGGGCGGGGCGGGCGCAGCCGGCGCTGAGCTTGCAGGGC CCGGGGCGGGGCGGGCGCAGCCGACGCTGAGCTTGCAGGGC < 41bp 0.819905345606205 0.616826757654027 0.88654375 0.5137702 prediction 0.406157175904357 Functional Loss - CD99 ENSG00000002586 UTR5 Human protein_coding chrX:2609253 chrX:2609256 . . 0 24 hm5C_associated_SNPs_96143 0 0 1 DDX3X POSTAR2 ENCODE chrX:2609248-2609334
64251 chr4 57897110 57897110 1 + G A BLCA 57897107 + 57897087 57897127 41 ACGCATGCAAACTATTGTTTCAGGAACTTATGTCTATGAGT ACGCATGCAAACTATTGTTTCAGAAACTTATGTCTATGAGT < 41bp 0.703073713620775 0.470747686840068 0.4402453 0.32639235 prediction 0.406147427241549 Functional Loss - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57897107 chr4:57897110 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_96145 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr4:57897058-57897179
64251 chr16 21983356 21983356 1 + C T UCEC 21983354 + 21983334 21983374 41 TTAGTGTTCTTCAGCATGTCCTCGGTGCTGGGCCACATGTC TTAGTGTTCTTCAGCATGTCCTTGGTGCTGGGCCACATGTC < 41bp 0.879620772253623 0.676550427484763 0.37916163 0.3033003 prediction 0.40614068953772 Functional Loss - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21983354 chr16:21983356 synonymous SNV . 0 23 hm5C_associated_SNPs_96147 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:21983325-21983366
64251 chr3 122420367 122420367 1 + C T SKCM 122420364 + 122420344 122420384 41 CCTGCCAGATACAGCTGCCCCGCCAGGTTTACCACCAGCAG CCTGCCAGATACAGCTGCCCCGCTAGGTTTACCACCAGCAG < 41bp 0.73012845196844 0.527059877197649 0.07694715 0.068882704 prediction 0.406137149541583 Functional Loss - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122420364 chr3:122420367 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_96150 0 0 3 BUD13 POSTAR2 ENCODE chr3:122420322-122420380
64251 chr6 33372691 33372691 1 + G T LUAD 33372689 + 33372669 33372709 41 AAGCAGAGGTGGCATCTCTGCGGCAGGAGACTGTGGCCCAG AAGCAGAGGTGGCATCTCTGCGTCAGGAGACTGTGGCCCAG < 41bp 0.918745432104122 0.715678825843495 0.7272681 0.24421054 prediction 0.406133212521254 Functional Loss - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33372689 chr6:33372691 synonymous SNV . 0 23 hm5C_associated_SNPs_96155 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr6:33372651-33372699
64251 chr2 24239106 24239106 1 + C T BLCA 24239103 + 24239083 24239123 41 GCTGACCCTGTGGCTGGGTTCTTCATCAACAGGAGCCAGAG GCTGACCCTGTGGCTGGGTTCTTTATCAACAGGAGCCAGAG < 41bp 0.703065867666647 0.481460618671218 0.31048006 0.1656327 prediction 0.406131735333293 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24239103 chr2:24239106 synonymous SNV . 0 24 hm5C_associated_SNPs_96157 0 0 1 NONO POSTAR2 ENCODE chr2:24239079-24239139
64251 chr5 102611899 102611899 1 + C T SKCM 102611896 + 102611876 102611916 41 GAAGCCATGCCATCCTTACGCTCCAAACAGCTAGATGCAGG GAAGCCATGCCATCCTTACGCTCTAAACAGCTAGATGCAGG < 41bp 0.799345325647847 0.596288894401263 0.42439115 0.17880264 prediction 0.406112862493168 Functional Loss - C5orf30 ENSG00000181751 CDS Human protein_coding chr5:102611896 chr5:102611899 synonymous SNV . 0 24 hm5C_associated_SNPs_96168 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:102611880-102611940
64251 chr19 39915878 39915878 1 + G A SKCM 39915875 + 39915855 39915895 41 CTGCTCTCTTGGCCTCCACACAGGAATCTATGGGCCTTCAC CTGCTCTCTTGGCCTCCACACAGAAATCTATGGGCCTTCAC < 41bp 0.825812498461139 0.622760341381428 0.9063036 0.29406315 prediction 0.406104314159423 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915875 chr19:39915878 nonsynonymous SNV 0.174 0 24 hm5C_associated_SNPs_96171 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:39915866-39915898
64251 chr20 62373570 62373570 1 + C T LIHC 62373567 + 62373547 62373587 41 CGGCGATGCAGAGACACATCCGCCTGGTGCACCTGGGGTGC CGGCGATGCAGAGACACATCCGCTTGGTGCACCTGGGGTGC < 41bp 0.720495234884983 0.517444911443564 0.3812037 0.27958745 prediction 0.40610064688284 Functional Loss - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373567 chr20:62373570 synonymous SNV . 0 24 hm5C_associated_SNPs_96172 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62373559-62373588
64251 chr14 95036141 95036141 1 + G A rs151132569 95036138 + 95036118 95036158 41 ACCCTGGTGCTGTGCAGCCTCTGGCAGAGCATCCGACCTCT ACCCTGGTGCTGTGCAGCCTCTGACAGAGCATCCGACCTCT < 41bp 0.774853497392964 0.571805602882976 0.13581616 0.032720655 prediction 0.406095789019975 Functional Loss - SERPINA4 ENSG00000100665 UTR3 Human protein_coding chr14:95036138 chr14:95036141 . . 0 24 hm5C_associated_SNPs_96177 0 0 2 LARP4 POSTAR2 ENCODE chr14:95036002-95036155
64251 chr2 179443661 179443661 1 + T C STAD 179443660 + 179443640 179443680 41 GTTACTCTAAAGGTGGTTTTCTGGACAGCTGAGGCGCACGT GTTACTCTAAAGGTGGTTTTCCGGACAGCTGAGGCGCACGT < 41bp 0.775888328005883 0.572843429595703 0.20128495 0.77335006 prediction 0.40608979682036 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179443660 chr2:179443661 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_96179 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:179443581-179443669
64251 chrX 136649645 136649645 1 + G A COAD 136649642 + 136649622 136649662 41 GAGGCTCAGCTGAGCCGGCCCAAGAAGAGCTGCGACCGGAC GAGGCTCAGCTGAGCCGGCCCAAAAAGAGCTGCGACCGGAC < 41bp 0.829391502935859 0.626347196724563 0.49318036 0.18823195 prediction 0.406088612422592 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649642 chrX:136649645 synonymous SNV . 0 24 hm5C_associated_SNPs_96181 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:136649615-136649650
64251 chr16 89289672 89289672 1 + C T LUSC 89289669 + 89289649 89289689 41 AGAGATGTGATGCTGGAAAACTACGAGAACCTGGCCTCAGT AGAGATGTGATGCTGGAAAACTATGAGAACCTGGCCTCAGT < 41bp 0.703042015548525 0.479359384622351 0.2681738 0.3261037 prediction 0.40608403109705 Functional Loss - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89289669 chr16:89289672 synonymous SNV . 0 24 hm5C_associated_SNPs_96182 0 0 1 PPIG POSTAR2 ENCODE chr16:89289588-89289708
64251 chr6 4892470 4892470 1 + C T THYM 4892467 + 4892447 4892487 41 CACAGTGGCACCCGAAGTGGCAGCGGAAAAGCCGGTCGGAG CACAGTGGCACCCGAAGTGGCAGTGGAAAAGCCGGTCGGAG < 41bp 0.73300918852148 0.529967892800264 0.7707491 0.44303104 prediction 0.406082591442433 Functional Loss - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892467 chr6:4892470 nonsynonymous SNV 0.029 1 24 hm5C_associated_SNPs_96184 0 0 6 GRWD1 POSTAR2 ENCODE chr6:4892351-4892481
64251 chr19 47858496 47858496 1 + G T LUSC 47858492 + 47858472 47858512 41 CCTCCAGCGCCTGTTGCCCACGCGGCCTGACCTCAAGGTCA CCTCCAGCGCCTGTTGCCCACGCGTCCTGACCTCAAGGTCA < 41bp 0.740386372638477 0.53734902736127 0.25143352 0.18464094 prediction 0.406074690554413 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858492 chr19:47858496 synonymous SNV . 0 25 hm5C_associated_SNPs_96187 0 0 1 RBM15 POSTAR2 ENCODE chr19:47858456-47858505
64251 chr17 79988573 79988573 1 + G C LIHC 79988569 + 79988549 79988589 41 GAAGCTGCGGCTCCGGGAGGCGGAGATCGCCCGCATCCGGG GAAGCTGCGGCTCCGGGAGGCGGACATCGCCCGCATCCGGG < 41bp 0.70303150853873 0.414543856368137 0.9369854 0.9262943 prediction 0.406063017077459 Functional Loss - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79988569 chr17:79988573 nonsynonymous SNV 0.980 1 25 hm5C_associated_SNPs_96196 0 0 5 GRWD1 POSTAR2 ENCODE chr17:79988552-79988644
64251 chr7 142961653 142961653 1 + C T SKCM 142961650 + 142961630 142961670 41 TCTCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCA TCTCCTGGCAGGAAACAAGCCTCTAGGTCTGCTTCCCCGCA < 41bp 0.794789944148014 0.591759263495273 0.9337709 0.5936976 prediction 0.406061361305482 Functional Loss - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142961650 chr7:142961653 nonsynonymous SNV 0.088 4 24 hm5C_associated_SNPs_96197 0 0 1 GRWD1 POSTAR2 ENCODE chr7:142961638-142961678
64251 chr9 19050115 19050115 1 + G A UCEC 19050112 + 19050092 19050132 41 GGAAGACCTGAGGCGTCTGTCTCGCCCGCTGGAGTGTGCTT GGAAGACCTGAGGCGTCTGTCTCACCCGCTGGAGTGTGCTT < 41bp 0.703027960904885 0.457236728775809 0.06703928 0.016508639 prediction 0.40605592180977 Functional Loss - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19050112 chr9:19050115 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_96199 0 0 2 RBM15 POSTAR2 ENCODE chr9:19050074-19050118
64251 chr1 45808537 45808537 1 + C T STAD 45808534 + 45808514 45808554 41 GTGAACGGGAAAATGGGAAGCAGCGGGCAGCTGGCAGCCCA GTGAACGGGAAAATGGGAAGCAGTGGGCAGCTGGCAGCCCA < 41bp 0.726634743354605 0.523607449691693 0.75553095 0.7831091 prediction 0.406054587325824 Functional Loss - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808534 chr1:45808537 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96201 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:45808536-45808566
64251 chr11 722413 722413 1 + T C COAD 722412 + 722392 722432 41 GTGCCCCAGATCGTCAACACCTGCAGTGGCCCAGACATCGC GTGCCCCAGATCGTCAACACCCGCAGTGGCCCAGACATCGC < 41bp 0.851644522423932 0.648620844514928 0.25488514 0.1468989 prediction 0.406047355818006 Functional Loss - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:722412 chr11:722413 nonsynonymous SNV 0.084 2 22 hm5C_associated_SNPs_96203 0 0 3 GRWD1 POSTAR2 ENCODE chr11:722402-722448
64251 chr1 19983382 19983382 1 + C T rs139196947 19983380 + 19983360 19983400 41 TGACGCTGGAGTGCCCGGGCCACGAGGAGGTGCCCAGGGTG TGACGCTGGAGTGCCCGGGCCATGAGGAGGTGCCCAGGGTG < 41bp 0.853637925090519 0.650614284592201 0.71785057 0.77657235 prediction 0.406047280996635 Functional Loss - MINOS1-NBL1;NBL1 ENSG00000158747;ENSG00000270136 CDS Human other chr1:19983380 chr1:19983382 synonymous SNV . 0 23 hm5C_associated_SNPs_96204 0 0 1 LIN28A POSTAR2 GSE39873,GSM980594 chr1:19983374-19983395
64251 chr1 156561573 156561573 1 + G T rs565429563 156561571 + 156561551 156561591 41 TGCGCCGGGGCCGGGCCGGGCCGGGGGCGCGCGCTCTGCGA TGCGCCGGGGCCGGGCCGGGCCTGGGGCGCGCGCTCTGCGA < 41bp 0.922170734784771 0.719149313742354 0.91265666 0.8805448 prediction 0.406042842084833 Functional Loss - NAXE ENSG00000163382 UTR5 Human protein_coding chr1:156561571 chr1:156561573 . . 0 23 hm5C_associated_SNPs_96208 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:156561560-156561580
64251 chr2 70123608 70123608 1 + C T BLCA 70123606 + 70123586 70123626 41 ATCCACATCTCCTTCCCCTTCTCGACTGAAAGAAAGAAGAG ATCCACATCTCCTTCCCCTTCTTGACTGAAAGAAAGAAGAG < 41bp 0.879961908348334 0.676941172159998 0.21400064 0.055042326 prediction 0.406041472376673 Functional Loss - SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70123606 chr2:70123608 stopgain 1.000 1 23 hm5C_associated_SNPs_96211 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:70123573-70123612
64251 chr17 8159873 8159873 1 + C T GBM 8159870 + 8159850 8159890 41 AGGGAAAGGAAGTCCGATTCCTACGGCCTGAGGACCCCACA AGGGAAAGGAAGTCCGATTCCTATGGCCTGAGGACCCCACA < 41bp 0.703017860741398 0.478456729386988 0.13442561 0.17329353 prediction 0.406035721482797 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8159870 chr17:8159873 nonsynonymous SNV 0.480 0 24 hm5C_associated_SNPs_96214 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:8159859-8159885
64251 chr20 61468561 61468561 1 + G A LUAD 61468558 + 61468538 61468578 41 CTCCATTGGTCACCCTGGCGCTCGAGGACCCCCTGGATACC CTCCATTGGTCACCCTGGCGCTCAAGGACCCCCTGGATACC < 41bp 0.82782544386994 0.624810119899981 0.081567585 0.04193577 prediction 0.406030647939919 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468558 chr20:61468561 nonsynonymous SNV 0.482 4 24 hm5C_associated_SNPs_96216 0 0 1 SND1 POSTAR2 ENCODE chr20:61468544-61468617
64251 chr4 106766627 106766627 1 + G A COAD 106766624 + 106766604 106766644 41 AGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCA AGTGCATGTGCTTGGTGGATCTGAATCGAGCAAGAGCTGCA < 41bp 0.789315585847641 0.586301525109635 0.13410065 0.07898867 prediction 0.406028121476012 Functional Loss - GSTCD ENSG00000138780 CDS Human protein_coding chr4:106766624 chr4:106766627 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_96218 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr4:106766601-106766627
64251 chr16 31090756 31090756 1 + C T BLCA 31090753 + 31090733 31090773 41 ACCCCCTTGGGAGACAGCCTCTGCATCCAGGGTGGGGAAAG ACCCCCTTGGGAGACAGCCTCTGTATCCAGGGTGGGGAAAG < 41bp 0.755408414010791 0.552395700891033 0.27131388 0.1006248 prediction 0.406025426239516 Functional Loss - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31090753 chr16:31090756 synonymous SNV . 0 24 hm5C_associated_SNPs_96219 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31090755-31090780
64251 chr8 27516983 27516983 1 + C T ACC 27516980 + 27516960 27517000 41 GACCTCAACGTCCGGAACCTCTCCATGATCGTGGAGGAGAT GACCTCAACGTCCGGAACCTCTCTATGATCGTGGAGGAGAT < 41bp 0.809695712387443 0.606693337993129 0.97107345 0.94265443 prediction 0.406004748788628 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516980 chr8:27516983 synonymous SNV . 0 24 hm5C_associated_SNPs_96228 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:27516952-27516990
64251 chr8 42173805 42173805 1 + C T STAD 42173803 + 42173783 42173823 41 CGACAGAGGGGCACGGATCCCACGTATGGGCCCAATGGCTG CGACAGAGGGGCACGGATCCCATGTATGGGCCCAATGGCTG < 41bp 0.845446783539812 0.64244533088416 0.18095315 0.34930366 prediction 0.406002905311305 Functional Loss - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42173803 chr8:42173805 nonsynonymous SNV 0.018 0 23 hm5C_associated_SNPs_96230 0 0 4 BUD13 POSTAR2 ENCODE chr8:42173773-42173819
64251 chr7 150068382 150068382 1 + C T UCEC 150068380 + 150068360 150068400 41 GGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCTGGGCCCT GGCCATGGGCCTGGCCCAGCCCTGACTCCTTTCTGGGCCCT < 41bp 0.829368285890427 0.626374043895963 0.33489168 0.22400343 prediction 0.405988483988929 Functional Loss - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068380 chr7:150068382 stopgain 0.514 0 23 hm5C_associated_SNPs_96235 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:150068360-150068400
64251 chr2 42522583 42522583 1 + T C LAML 42522582 + 42522562 42522602 41 GGGGAATGGAGATGTTCTTACTGGAGACTCAGGTGGAGTCA GGGGAATGGAGATGTTCTTACCGGAGACTCAGGTGGAGTCA < 41bp 0.835062148393507 0.632068733038454 0.7294077 0.9043445 prediction 0.405986830710106 Functional Loss - EML4 ENSG00000143924 CDS Human protein_coding chr2:42522582 chr2:42522583 synonymous SNV . 0 22 hm5C_associated_SNPs_96236 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:42522573-42522587
64251 chr7 102065499 102065499 1 + G T LUAD 102065497 + 102065477 102065517 41 GGAGCAGGGGTCCAGCAGCTCTGCGGAGGCATCTGGAACAG GGAGCAGGGGTCCAGCAGCTCTTCGGAGGCATCTGGAACAG < 41bp 0.904698585107869 0.701705344120386 0.50386316 0.22087714 prediction 0.405986481974967 Functional Loss - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102065497 chr7:102065499 nonsynonymous SNV 0.730 0 23 hm5C_associated_SNPs_96237 0 0 4 GRWD1 POSTAR2 ENCODE chr7:102065488-102065663
64251 chr19 35660502 35660502 1 + G T HNSC 35660500 + 35660480 35660520 41 AGGCAGCTGTCCCGGTTATGCCGGAATCGTTGCAGGTGAGT AGGCAGCTGTCCCGGTTATGCCTGAATCGTTGCAGGTGAGT < 41bp 0.702990919561089 0.360113742487713 0.6639625 0.19020921 prediction 0.405981839122177 Functional Loss - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35660500 chr19:35660502 nonsynonymous SNV 0.043 0 23 hm5C_associated_SNPs_96239 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:35660474-35660507
64251 chr17 37899243 37899243 1 + G T SARC 37899241 + 37899221 37899261 41 ACGTGTGTGAAATGCTGGTGCAGCGAGCTCACGCCTTGAGC ACGTGTGTGAAATGCTGGTGCATCGAGCTCACGCCTTGAGC < 41bp 0.702988562647837 0.341849864119854 0.09607151 0.041683227 prediction 0.405977125295675 Functional Loss - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37899241 chr17:37899243 nonsynonymous SNV 0.955 0 23 hm5C_associated_SNPs_96241 0 0 1 PPIG POSTAR2 ENCODE chr17:37899228-37899293
64251 chr18 9859341 9859341 1 + C T rs149147951 9859339 + 9859319 9859359 41 TTGACCCAAGGGCCGTGGTCCACGGTACTTGAAGAAGCCAG TTGACCCAAGGGCCGTGGTCCATGGTACTTGAAGAAGCCAG < 41bp 0.825888894613826 0.622906535295203 0.19071269 0.096236855 prediction 0.405964718637245 Functional Loss - RAB31 ENSG00000168461 UTR3 Human protein_coding chr18:9859339 chr18:9859341 . . 0 23 hm5C_associated_SNPs_96250 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:9859300-9859352
64251 chr6 88138385 88138385 1 + A T LUSC 88138383 + 88138363 88138403 41 CTACTCTGTGGACCAGCTTGCAAGACGAAACTATTGTGGTT CTACTCTGTGGACCAGCTTGCATGACGAAACTATTGTGGTT < 41bp 0.70297550187904 0.482199541763141 0.8832503 0.33583823 prediction 0.405951003758079 Functional Loss - CFAP206 ENSG00000213204;ENSG00000272514 CDS Human other chr6:88138383 chr6:88138385 nonsynonymous SNV 0.015 3 23 hm5C_associated_SNPs_96252 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr6:88138360-88138389
64251 chr2 182322468 182322468 1 + G A SKCM 182322465 + 182322445 182322485 41 CTGTTGCTGTGCCTGGGGGTCCCGACCGGCCGCCCCTACAA CTGTTGCTGTGCCTGGGGGTCCCAACCGGCCGCCCCTACAA < 41bp 0.827318919663205 0.62434372592409 0.40255013 0.39490697 prediction 0.40595038747823 Functional Loss - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182322465 chr2:182322468 synonymous SNV . 0 24 hm5C_associated_SNPs_96253 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:182322432-182322474
64251 chr5 167850695 167850695 1 + C T STAD 167850692 + 167850672 167850712 41 TTGAGCAGCTGGACTCAGAGCTGCAGAGCAAGGTGGAGTTC TTGAGCAGCTGGACTCAGAGCTGTAGAGCAAGGTGGAGTTC < 41bp 0.702966841923639 0.467986986756915 0.4532026 0.24023521 prediction 0.405933683847277 Functional Loss - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850692 chr5:167850695 stopgain 0.714 1 24 hm5C_associated_SNPs_96257 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr5:167850676-167850697
64251 chr9 35676353 35676353 1 + G A LGG 35676350 + 35676330 35676370 41 GTTGACGAGGCCTTGGGGCGCCCGGGAGGCCTGGCCGTGTT GTTGACGAGGCCTTGGGGCGCCCAGGAGGCCTGGCCGTGTT < 41bp 0.830572604756714 0.62760664533772 0.8827012 0.5166199 prediction 0.405931918837987 Functional Loss - CA9 ENSG00000107159 CDS Human protein_coding chr9:35676350 chr9:35676353 synonymous SNV . 0 24 hm5C_associated_SNPs_96259 0 0 1 PPIG POSTAR2 ENCODE chr9:35676309-35676376
64251 chr17 27009838 27009838 1 + C T STAD 27009836 + 27009816 27009856 41 CACGAGACAGAGCAGTTTCCCGCGGAGCCCTTGGAGCTGGC CACGAGACAGAGCAGTTTCCCGTGGAGCCCTTGGAGCTGGC < 41bp 0.858756594845003 0.65579185643063 0.57182086 0.2715241 prediction 0.405929476828745 Functional Loss - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27009836 chr17:27009838 nonsynonymous SNV 0.740 1 23 hm5C_associated_SNPs_96260 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:27009819-27009866
64251 chr22 29446407 29446407 1 + G T LUSC 29446403 + 29446383 29446423 41 CCTCTACGAGGGCTCTGGCCCGGCGGGTGGGGAGCCCCAGT CCTCTACGAGGGCTCTGGCCCGGCTGGTGGGGAGCCCCAGT < 41bp 0.738278594222082 0.535319690892764 0.919139 0.8972188 prediction 0.405917806658636 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446403 chr22:29446407 synonymous SNV . 0 25 hm5C_associated_SNPs_96268 0 0 3 DDX3X POSTAR2 ENCODE chr22:29446400-29446411
64251 chr2 239359541 239359541 1 + G A rs576908219 239359538 + 239359518 239359558 41 TCGGCAAGCAGGCCTGGCCTCCCGGGGCCTGGATCCCTACC TCGGCAAGCAGGCCTGGCCTCCCAGGGCCTGGATCCCTACC < 41bp 0.783886640418007 0.580931651959499 0.7919622 0.66983247 prediction 0.405909976917016 Functional Loss - ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239359538 chr2:239359541 . . 0 24 hm5C_associated_SNPs_96271 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:239359514-239359541
64251 chr6 54791239 54791239 1 + G A LGG 54791236 + 54791216 54791256 41 AGAAATCGTTGAGGCATCAACTCGAGGAGTATCTGTTTACA AGAAATCGTTGAGGCATCAACTCAAGGAGTATCTGTTTACA < 41bp 0.795052645325983 0.592100127238873 0.40619186 0.1537177 prediction 0.40590503617422 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54791236 chr6:54791239 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_96273 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:54791237-54791275
64251 chr7 36193177 36193177 1 + C T rs140096401 36193175 + 36193155 36193195 41 CCTGACCAGTGACCCACACCCGCGCGGACGCCTAGGCTGGA CCTGACCAGTGACCCACACCCGTGCGGACGCCTAGGCTGGA < 41bp 0.702949374628065 0.496871662584344 0.69475466 0.7676761 prediction 0.405898749256131 Functional Loss - EEPD1 ENSG00000122547 UTR5 Human protein_coding chr7:36193175 chr7:36193177 . . 0 23 hm5C_associated_SNPs_96276 0 0 1 DDX3X POSTAR2 ENCODE chr7:36193140-36193221
64251 chr20 61471965 61471965 1 + G C HNSC 61471961 + 61471941 61471981 41 CCCGGCGAGCCTGGGCCTCCCGGAGATCCTGGGCTTCCAGG CCCGGCGAGCCTGGGCCTCCCGGACATCCTGGGCTTCCAGG < 41bp 0.875855662868321 0.672907077465264 0.9071823 0.3556431 prediction 0.405897170806114 Functional Loss - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61471961 chr20:61471965 nonsynonymous SNV 0.004 4 25 hm5C_associated_SNPs_96277 0 0 7 BUD13 POSTAR2 ENCODE chr20:61471924-61471967
64251 chr4 154265839 154265839 1 + C T rs142163233 154265837 + 154265817 154265857 41 AAACGCGTCCTGGCCTGTCCCGCCCCTCTCCCCAAGCGCGG AAACGCGTCCTGGCCTGTCCCGTCCCTCTCCCCAAGCGCGG < 41bp 0.772017471573321 0.569069486109265 0.09487602 0.12690163 prediction 0.405895970928113 Functional Loss - MND1 ENSG00000121211 UTR5 Human protein_coding chr4:154265837 chr4:154265839 . . 0 23 hm5C_associated_SNPs_96278 0 0 2 DDX3X POSTAR2 ENCODE chr4:154265834-154265893
64251 chr12 32369262 32369262 1 + G T UCEC 32369260 + 32369240 32369280 41 GGAAACGCTTCTGCAGGAGTCAGCATCGAAGGAGGCTTACT GGAAACGCTTCTGCAGGAGTCATCATCGAAGGAGGCTTACT < 41bp 0.702945668813773 0.352570534647709 0.76544565 0.12890387 prediction 0.405891337627546 Functional Loss - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32369260 chr12:32369262 nonsynonymous SNV 0.921 4 23 hm5C_associated_SNPs_96282 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:32369244-32369277
64251 chr5 44809448 44809448 1 + G A COAD 44809445 + 44809425 44809465 41 CCCCCAGCGGAGCCCGAGCCCGAGCCCGAACCCGAACCTGA CCCCCAGCGGAGCCCGAGCCCGAACCCGAACCCGAACCTGA < 41bp 0.820951172678093 0.61801153761719 0.6119535 0.36515415 prediction 0.405879270121806 Functional Loss - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809445 chr5:44809448 synonymous SNV 0.011 0 24 hm5C_associated_SNPs_96285 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:44809440-44809460
64251 chr17 71232605 71232605 1 + G A rs147669111 71232602 + 71232582 71232622 41 GAAAAGCAGGAACGGACTGTCATGAGCCATGGCTGTGAGAA GAAAAGCAGGAACGGACTGTCATAAGCCATGGCTGTGAGAA < 41bp 0.702936891733399 0.460445241484391 0.28853852 0.13336003 prediction 0.405873783466799 Functional Loss - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232602 chr17:71232605 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_96289 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232572-71232607
64251 chr6 44360532 44360532 1 + C T STAD 44360529 + 44360509 44360549 41 TGCTCCAATCATTGGAAGAACAGCGGCCCAGTGCTTAGAAC TGCTCCAATCATTGGAAGAACAGTGGCCCAGTGCTTAGAAC < 41bp 0.702934455332434 0.486776588300658 0.5517411 0.26762706 prediction 0.405868910664868 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44360529 chr6:44360532 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_96291 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:44360408-44360534
64251 chr9 108456888 108456888 1 + A C rs2271247 108456884 + 108456864 108456904 41 CCCTCTCCTACTCCTCACCGCGCGAGCGCGGGGAACCAGTA CCCTCTCCTACTCCTCACCGCGCGCGCGCGGGGAACCAGTA < 41bp 0.903148836651345 0.700215065145728 0.34509045 0.33342254 prediction 0.405867543011236 Functional Loss - TMEM38B ENSG00000095209 UTR5 Human protein_coding chr9:108456884 chr9:108456888 . . 0 25 hm5C_associated_SNPs_96292 0 0 7 DDX3X POSTAR2 ENCODE chr9:108456834-108456945
64251 chr12 4763595 4763595 1 + G T UCEC 4763593 + 4763573 4763613 41 GGCCACTGTGTTTGGAGCAACAGGATTCCTGGGGCGATATG GGCCACTGTGTTTGGAGCAACATGATTCCTGGGGCGATATG < 41bp 0.916623694411682 0.713691614179058 0.8752037 0.3249952 prediction 0.405864160465249 Functional Loss - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4763593 chr12:4763595 stopgain 0.998 1 23 hm5C_associated_SNPs_96293 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:4763569-4763607
64251 chr19 10225224 10225224 1 + T C KIRC 10225223 + 10225203 10225243 41 TGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCCT TGATGCGGGGCCTCATGCCCCCGGCCTTCTGTGTCCACCCT < 41bp 0.702930527287375 0.486562512848887 0.54302025 0.57712835 prediction 0.405861054574751 Functional Loss - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225223 chr19:10225224 nonsynonymous SNV 0.677 3 22 hm5C_associated_SNPs_96295 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10225186-10225268
64251 chr1 41483438 41483438 1 + G A COAD 41483435 + 41483415 41483455 41 CAGGCGTGCGCGGTCCTCGTCACGGTGGCTGCAGCGGATGC CAGGCGTGCGCGGTCCTCGTCACAGTGGCTGCAGCGGATGC < 41bp 0.828358350052167 0.625435812614127 0.7700153 0.65273625 prediction 0.405845074876079 Functional Loss - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483435 chr1:41483438 nonsynonymous SNV 0.014 2 24 hm5C_associated_SNPs_96299 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:41483435-41483463
64251 chr2 232573306 232573306 1 + T C rs547581005 232573305 + 232573285 232573325 41 TCCTTGCTCGCCGCAGCCGCCTCCGCCGCGCGCCTCCTCCG TCCTTGCTCGCCGCAGCCGCCCCCGCCGCGCGCCTCCTCCG < 41bp 0.791721204420954 0.588798788023455 0.26865086 0.22200355 prediction 0.405844832794997 Functional Loss - PTMA ENSG00000187514 UTR5 Human protein_coding chr2:232573305 chr2:232573306 . . 0 22 hm5C_associated_SNPs_96300 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:232573241-232573308
64251 chr12 56494908 56494908 1 + C T rs551223118 56494906 + 56494886 56494926 41 AGTCTCTCTACACCCAATGCCACGGGGATGCCTGGCATCAG AGTCTCTCTACACCCAATGCCATGGGGATGCCTGGCATCAG < 41bp 0.702920546897254 0.43248281697797 0.45240885 0.49981448 prediction 0.405841093794509 Functional Loss - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56494906 chr12:56494908 nonsynonymous SNV 0.150 0 23 hm5C_associated_SNPs_96301 0 0 1 U2AF2 POSTAR2 ENCODE chr12:56494831-56494911
64251 chr11 62433224 62433224 1 + G T rs112534450 62433222 + 62433202 62433242 41 TTTTCCGGGACTGCAGAGTTCGGGGAAGCTGTACGCCGCCT TTTTCCGGGACTGCAGAGTTCGTGGAAGCTGTACGCCGCCT < 41bp 0.86495462941281 0.662037740935272 0.938498 0.9122383 prediction 0.405833776955076 Functional Loss - METTL12 ENSG00000214756 UTR5 Human protein_coding chr11:62433222 chr11:62433224 . . 0 23 hm5C_associated_SNPs_96307 0 0 12 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:62433151-62433242
64251 chr15 63541860 63541860 1 + G A LUSC 63541857 + 63541837 63541877 41 ATTTTAGGGACACAGCGGGTCAGGAAAGATTCCGAACAATC ATTTTAGGGACACAGCGGGTCAGAAAAGATTCCGAACAATC < 41bp 0.780985160670361 0.578069529001325 0.36402828 0.117800534 prediction 0.405831263338072 Functional Loss - RAB8B ENSG00000166128 CDS Human protein_coding chr15:63541857 chr15:63541860 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_96309 0 0 1 SF3B4 POSTAR2 ENCODE chr15:63541795-63541948
64251 chr8 22414382 22414382 1 + G A rs575294896 22414379 + 22414359 22414399 41 TGGGTCAAGTACGAGGGAATCGGGCCCGTGGACGAGAGCGG TGGGTCAAGTACGAGGGAATCGGACCCGTGGACGAGAGCGG < 41bp 0.702914557601409 0.456335598411191 0.9032766 0.6803897 prediction 0.405829115202818 Functional Loss - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22414379 chr8:22414382 synonymous SNV . 0 24 hm5C_associated_SNPs_96311 0 0 3 BUD13 POSTAR2 ENCODE chr8:22414365-22414417
64251 chr4 88903834 88903834 1 + G A LUSC 88903831 + 88903811 88903851 41 AACCCACAGCCACAAGCAGTCCAGATTATATAAGCGGAAAG AACCCACAGCCACAAGCAGTCCAAATTATATAAGCGGAAAG < 41bp 0.702913183755126 0.472238992681192 0.32467616 0.123322815 prediction 0.405826367510252 Functional Loss - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903831 chr4:88903834 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_96313 0 0 2 SND1 POSTAR2 ENCODE chr4:88903798-88903835
64251 chr12 67696194 67696194 1 + G T UCEC 67696190 + 67696170 67696210 41 CTTGGATGCTGTAGTTAGCACAAGGCATGAAATGCTTCCAG CTTGGATGCTGTAGTTAGCACAAGTCATGAAATGCTTCCAG < 41bp 0.706597396687204 0.503687846531177 0.42253307 0.38950542 prediction 0.405819100312055 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67696190 chr12:67696194 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_96315 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr12:67696114-67696195
64251 chr16 31717354 31717354 1 + T C rs1406178 31717353 + 31717333 31717373 41 ACACAGGGCTTTTACCATAACTGGTGAGTCCCTGCCAGCCT ACACAGGGCTTTTACCATAACCGGTGAGTCCCTGCCAGCCT < 41bp 0.759039344457673 0.556138478366661 0.15580904 0.067144305 prediction 0.405801732182023 Functional Loss - CLUHP3 ENSG00000131797 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:31717353 chr16:31717354 . . 0 22 hm5C_associated_SNPs_96322 0 0 5 BUD13 POSTAR2 ENCODE chr16:31717336-31717401
64251 chr1 146758079 146758079 1 + A C COAD 146758075 + 146758055 146758095 41 GGGAAGAGAGCTCTGCTGAGCTGGATTACCAAGACCCAGAT GGGAAGAGAGCTCTGCTGAGCTGGCTTACCAAGACCCAGAT < 41bp 0.941671620158013 0.738773039426963 0.22934857 0.27448732 prediction 0.4057971614621 Functional Loss - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146758075 chr1:146758079 nonsynonymous SNV 0.966 0 25 hm5C_associated_SNPs_96324 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:146758048-146758094
64251 chr2 159314102 159314102 1 + C T rs573913606 159314100 + 159314080 159314120 41 TGAGCCCTGCTGGACGCCCTCGCGGCGGCTTCCCCGCTGCC TGAGCCCTGCTGGACGCCCTCGTGGCGGCTTCCCCGCTGCC < 41bp 0.757216324717964 0.554318267218842 0.93521774 0.92125225 prediction 0.405796114998245 Functional Loss - PKP4 ENSG00000144283 UTR5 Human protein_coding chr2:159314100 chr2:159314102 . . 0 23 hm5C_associated_SNPs_96325 0 0 7 GEMIN5 POSTAR2 ENCODE chr2:159314076-159314136
64251 chr2 96874697 96874697 1 + C T rs189772980 96874695 + 96874675 96874715 41 CTCCTGCCCCTTCATGCATGCGCGGAGGCCGCCTGCTAGCA CTCCTGCCCCTTCATGCATGCGTGGAGGCCGCCTGCTAGCA < 41bp 0.794785301377689 0.591887855591128 0.45980453 0.43154034 prediction 0.405794891573121 Functional Loss - STARD7-AS1 ENSG00000204685 ncRNA_exonic Human processed_transcript chr2:96874695 chr2:96874697 . . 0 23 hm5C_associated_SNPs_96328 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:96874666-96874699
64251 chr1 229795833 229795833 1 + G A rs35613698 229795830 + 229795810 229795850 41 GTCTCAGTTACCCAGATAACCTCGGTTGTCACCTTGGAGTA GTCTCAGTTACCCAGATAACCTCAGTTGTCACCTTGGAGTA < 41bp 0.712427626842962 0.509530950070652 0.24159941 0.07555756 prediction 0.40579335354462 Functional Loss - URB2 ENSG00000135763 UTR3 Human protein_coding chr1:229795830 chr1:229795833 . . 0 24 hm5C_associated_SNPs_96329 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:229795769-229795889
64251 chr20 49575979 49575979 1 + C T BLCA 49575977 + 49575957 49575997 41 GTGTGCTGGCGGGTCGGCCCCTCGTGTCTGCCAGTGCCTTG GTGTGCTGGCGGGTCGGCCCCTTGTGTCTGCCAGTGCCTTG < 41bp 0.8527768214558 0.649880263506917 0.25440893 0.1993694 prediction 0.405793115897767 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575977 chr20:49575979 synonymous SNV . 0 23 hm5C_associated_SNPs_96330 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr20:49575947-49575980
64251 chr7 99045859 99045859 1 + G T COAD 99045856 + 99045836 99045876 41 GAGTTCCTGCATGAGTATGACATGACCAAGATGCCCGAGTG GAGTTCCTGCATGAGTATGACATTACCAAGATGCCCGAGTG < 41bp 0.702894662330004 0.307424170876251 0.16465399 0.05364448 prediction 0.405789324660008 Functional Loss - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99045856 chr7:99045859 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_96333 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99045829-99045881
64251 chr16 81479080 81479080 1 + G A SKCM 81479077 + 81479057 81479097 41 TTTCTCAGCAAGATCCTCACCTCGAAATTCCTGAGGCGCTG TTTCTCAGCAAGATCCTCACCTCAAAATTCCTGAGGCGCTG < 41bp 0.802803962937321 0.599911864535625 0.8965564 0.17191231 prediction 0.405784196803394 Functional Loss - CMIP ENSG00000153815 CDS Human protein_coding chr16:81479077 chr16:81479080 synonymous SNV . 0 24 hm5C_associated_SNPs_96337 0 0 2 YBX3 POSTAR2 ENCODE chr16:81479063-81479105
64251 chrX 13331451 13331451 1 + G A rs143122872 13331448 + 13331428 13331468 41 TTTCTTCTGCTGCTGCTAGTCATGAGATCAAGGTGGGTCTG TTTCTTCTGCTGCTGCTAGTCATAAGATCAAGGTGGGTCTG < 41bp 0.769315506845121 0.566426183560478 0.72541016 0.42034835 prediction 0.405778646569286 Functional Loss - GS1-600G8.3 ENSG00000231216 ncRNA_exonic Human antisense chrX:13331448 chrX:13331451 . . 0 24 hm5C_associated_SNPs_96339 0 0 2 SRSF1 POSTAR2 ENCODE chrX:13331433-13331469
64251 chr8 8860620 8860620 1 + T C rs2288672 8860619 + 8860599 8860639 41 CTGCCGGCGAGGCCGTGGCTCTCGCGCTGCTGGAGTCGCCG CTGCCGGCGAGGCCGTGGCTCCCGCGCTGCTGGAGTCGCCG < 41bp 0.752543721514354 0.549655143367318 0.23866001 0.16165334 prediction 0.405777156294073 Functional Loss - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8860619 chr8:8860620 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_96342 0 0 2 DDX6 POSTAR2 ENCODE chr8:8860531-8860639
64251 chr22 23438057 23438057 1 + G T LUAD 23438053 + 23438033 23438073 41 AAACAGATGAAGATCATCCACAGCGGCGGCTTCAACCTGGA AAACAGATGAAGATCATCCACAGCTGCGGCTTCAACCTGGA < 41bp 0.702883542131165 0.495246910232828 0.70619303 0.24801335 prediction 0.405767084262331 Functional Loss - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438053 chr22:23438057 nonsynonymous SNV 0.927 1 25 hm5C_associated_SNPs_96344 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23438038-23438086
64251 chr22 23438056 23438056 1 + C T STAD 23438053 + 23438033 23438073 41 AAACAGATGAAGATCATCCACAGCGGCGGCTTCAACCTGGA AAACAGATGAAGATCATCCACAGTGGCGGCTTCAACCTGGA < 41bp 0.702883542131165 0.493953679517465 0.70619303 0.3566345 prediction 0.405767084262331 Functional Loss - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23438053 chr22:23438056 synonymous SNV . 0 24 hm5C_associated_SNPs_96345 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:23438038-23438086
64251 chr16 67196901 67196901 1 + G A UCEC 67196898 + 67196878 67196918 41 ATGGTTCTGGCGGGCCGTGCCCCGGGGCTGCGAGGCCTGCG ATGGTTCTGGCGGGCCGTGCCCCAGGGCTGCGAGGCCTGCG < 41bp 0.827736717138231 0.62485678522572 0.26508015 0.062535316 prediction 0.405759863825023 Functional Loss - FBXL8 ENSG00000135722 CDS Human protein_coding chr16:67196898 chr16:67196901 synonymous SNV . 0 24 hm5C_associated_SNPs_96350 0 0 5 GRWD1 POSTAR2 ENCODE chr16:67196799-67196951
64251 chr17 78086452 78086452 1 + C T LUAD 78086449 + 78086429 78086469 41 TTTGCTGGCCACGGCCGATACGCCGGCCACTGGACGGGGGA TTTGCTGGCCACGGCCGATACGCTGGCCACTGGACGGGGGA < 41bp 0.757080942886682 0.554203631118112 0.09996694 0.09417266 prediction 0.405754623537139 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78086449 chr17:78086452 synonymous SNV . 0 24 hm5C_associated_SNPs_96353 1 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:78086440-78086460
64251 chr17 66511561 66511561 1 + C T BRCA 66511558 + 66511538 66511578 41 ACCATGGAGTCTGGCAGTACCGCCGCCAGTGAGGAGGCACG ACCATGGAGTCTGGCAGTACCGCTGCCAGTGAGGAGGCACG < 41bp 0.702876891620481 0.483585713011242 0.41141635 0.28457302 prediction 0.405753783240962 Functional Loss - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66511558 chr17:66511561 synonymous SNV . 0 24 hm5C_associated_SNPs_96354 0 0 20 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:66511536-66511562
64251 chr12 124189191 124189191 1 + G A BRCA 124189188 + 124189168 124189208 41 ATCCTCATCTCGGATGCTGGCGCGGTGGAAGGGATTACTCA ATCCTCATCTCGGATGCTGGCGCAGTGGAAGGGATTACTCA < 41bp 0.826045001620015 0.623171818800543 0.8724268 0.6161643 prediction 0.405746365638945 Functional Loss - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124189188 chr12:124189191 synonymous SNV . 0 24 hm5C_associated_SNPs_96360 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:124189143-124189198
64251 chr14 60581721 60581721 1 + G A BLCA 60581718 + 60581698 60581738 41 AGTAATGTTCATCATGTCTGCTGGAACAGCTATAGCATCAT AGTAATGTTCATCATGTCTGCTGAAACAGCTATAGCATCAT < 41bp 0.702872823172378 0.477309052561817 0.081190616 0.041021854 prediction 0.405745646344755 Functional Loss - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60581718 chr14:60581721 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_96361 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:60581707-60581721
64251 chr11 118516333 118516333 1 + G A rs138777339 118516330 + 118516310 118516350 41 ATGGAGACCAGCATCTCCACCGGGGGCAACTCGGCCTGCTC ATGGAGACCAGCATCTCCACCGGAGGCAACTCGGCCTGCTC < 41bp 0.818309177118961 0.615438329965734 0.9601177 0.94620305 prediction 0.405741694306455 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118516330 chr11:118516333 synonymous SNV . 0 24 hm5C_associated_SNPs_96363 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:118516333-118516334
64251 chr17 42635787 42635787 1 + C T UCEC 42635785 + 42635765 42635805 41 TCACAGGAGGAGACGCGTTTCGCGCGCCTCTGGATCCTCAC TCACAGGAGGAGACGCGTTTCGTGCGCCTCTGGATCCTCAC < 41bp 0.817165602536225 0.614299102481596 0.1662555 0.059384853 prediction 0.405733000109259 Functional Loss - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42635785 chr17:42635787 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_96367 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42635763-42635801
64251 chr19 58132422 58132422 1 + G T SARC 58132419 + 58132399 58132439 41 TCAGCATGAGAGTATTCACACTGGAGAAAATCCTTATGATT TCAGCATGAGAGTATTCACACTGTAGAAAATCCTTATGATT < 41bp 0.70286246311101 0.353983540751671 0.08218333 0.020528078 prediction 0.40572492622202 Functional Loss - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58132419 chr19:58132422 nonsynonymous SNV 0.016 3 24 hm5C_associated_SNPs_96370 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:58132395-58132432
64251 chr5 135496554 135496554 1 + C T SKCM 135496551 + 135496531 135496571 41 TTTTTGTTTTTCAGTCTTACCTCCAGTATTAGTGCCTCGTC TTTTTGTTTTTCAGTCTTACCTCTAGTATTAGTGCCTCGTC < 41bp 0.788186867063409 0.585325074027261 0.9477488 0.5845751 prediction 0.405723586072297 Functional Loss - SMAD5 ENSG00000113658 CDS Human protein_coding chr5:135496551 chr5:135496554 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_96371 0 0 4 U2AF2 POSTAR2 GSE83923,CSM2221659 chr5:135496540-135496560
64251 chr15 25417659 25417659 1 + G T LUSC 25417656 + 25417636 25417676 41 CTGGGCCAGTGTCCATCAGCCAGGTGCCCAGACCCCAGTGC CTGGGCCAGTGTCCATCAGCCAGTTGCCCAGACCCCAGTGC < 41bp 0.70286158307986 0.335117991912142 0.9026282 0.44733647 prediction 0.405723166159719 Functional Loss - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25417656 chr15:25417659 . . 0 24 hm5C_associated_SNPs_96372 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:25417640-25417660
64251 chr16 30982993 30982993 1 + C T SKCM 30982990 + 30982970 30983010 41 GCCGGAAAGGGTTGCAGGCTCCCCAGTCACACCCCTGCCCG GCCGGAAAGGGTTGCAGGCTCCCTAGTCACACCCCTGCCCG < 41bp 0.702861171857608 0.492786161289215 0.014185667 0.00892657 prediction 0.405722343715216 Functional Loss - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30982990 chr16:30982993 nonsynonymous SNV 0.265 2 24 hm5C_associated_SNPs_96373 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30982966-30982993
64251 chr20 43043167 43043167 1 + G A SKCM 43043164 + 43043144 43043184 41 AAGATCACCTCCCCCGTCTCCGGGATCAACGGCGACATTCG AAGATCACCTCCCCCGTCTCCGGAATCAACGGCGACATTCG < 41bp 0.82279938900068 0.619944898117668 0.9113469 0.7324393 prediction 0.405708981766025 Functional Loss - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43043164 chr20:43043167 synonymous SNV . 0 24 hm5C_associated_SNPs_96378 0 0 2 PPIG POSTAR2 ENCODE chr20:43043156-43043265
64251 chr9 104075240 104075240 1 + C T UCEC 104075237 + 104075217 104075257 41 TGCTGGTTTCATCCTGGGCACTGCAGTGGCCCTGTTTCTGG TGCTGGTTTCATCCTGGGCACTGTAGTGGCCCTGTTTCTGG < 41bp 0.783402481001052 0.580553784530317 0.21051127 0.16015881 prediction 0.40569739294147 Functional Loss - PLPPR1 ENSG00000148123 CDS Human protein_coding chr9:104075237 chr9:104075240 nonsynonymous SNV 0.682 4 24 hm5C_associated_SNPs_96383 0 0 2 PRPF8 POSTAR2 ENCODE chr9:104075196-104075274
64251 chr9 133759820 133759820 1 + C T UCEC 133759817 + 133759797 133759837 41 GCAGCTCCAGCAAGCGCTTCCTGCGCTCTTGCTCCGCCTCC GCAGCTCCAGCAAGCGCTTCCTGTGCTCTTGCTCCGCCTCC < 41bp 0.702846003789972 0.488297444509151 0.085849404 0.08599433 prediction 0.405692007579944 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133759817 chr9:133759820 nonsynonymous SNV 0.937 4 24 hm5C_associated_SNPs_96384 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133759804-133759853
64251 chrX 17764185 17764185 1 + G T UCEC 17764183 + 17764163 17764203 41 CCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTC CCTGTAATACTGAAGAGCAACTTAAGACAGTTGATGATGTC < 41bp 0.702845360805308 0.366524518448218 0.8598491 0.34489006 prediction 0.405690721610616 Functional Loss - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17764183 chrX:17764185 synonymous SNV . 0 23 hm5C_associated_SNPs_96385 0 0 17 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:17764166-17764185
64251 chr19 5649954 5649954 1 + C T COAD 5649952 + 5649932 5649972 41 TCTAGTTCTCCCGAAGATGACTCGGATACAAAAAGGCTTTC TCTAGTTCTCCCGAAGATGACTTGGATACAAAAAGGCTTTC < 41bp 0.70284494241454 0.416546287422285 0.26145315 0.1742459 prediction 0.405689884829079 Functional Loss - SAFB ENSG00000160633 CDS Human protein_coding chr19:5649952 chr19:5649954 nonsynonymous SNV 0.861 0 23 hm5C_associated_SNPs_96388 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:5649918-5649960
64251 chr16 70154479 70154479 1 + C T UCEC 70154476 + 70154456 70154496 41 AACTGGTCCTCTGCAAGAAACAGCACGTCAGCTGCCGAGGC AACTGGTCCTCTGCAAGAAACAGTACGTCAGCTGCCGAGGC < 41bp 0.750222662379246 0.547379836685971 0.59123254 0.5154523 prediction 0.405685651386549 Functional Loss - PDPR ENSG00000090857 CDS Human protein_coding chr16:70154476 chr16:70154479 synonymous SNV . 0 24 hm5C_associated_SNPs_96389 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:70154460-70154485
64251 chr3 14220380 14220380 1 + A C ACC 14220379 + 14220359 14220399 41 ACATGGCGGACGACGTAGACCAGGTAAGTGTATTTTAAGGA ACATGGCGGACGACGTAGACCCGGTAAGTGTATTTTAAGGA < 41bp 0.838223380309114 0.635384062385069 0.7074423 0.11888495 prediction 0.405678635848091 Functional Loss - LSM3 ENSG00000170860 CDS Human protein_coding chr3:14220379 chr3:14220380 nonsynonymous SNV 0.978 1 22 hm5C_associated_SNPs_96392 0 0 1 GRWD1 POSTAR2 ENCODE chr3:14220352-14220381
64251 chr6 11538562 11538562 1 + G A UCEC 11538559 + 11538539 11538579 41 TGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTGGGCC TGATCAACCTGTCGGTGCAGCAGATCCTGAGCCTCTGGGCC < 41bp 0.702838679368283 0.460562719762622 0.6000068 0.21579659 prediction 0.405677358736566 Functional Loss - TMEM170B ENSG00000205269 CDS Human protein_coding chr6:11538559 chr6:11538562 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_96393 0 0 2 DDX3X POSTAR2 ENCODE chr6:11538555-11538600
64251 chr17 34901624 34901624 1 + C T UCEC 34901621 + 34901601 34901641 41 GACGGGGAGGAGGAGTTCCCCTTCGAGAGGAGGCAGATTCC GACGGGGAGGAGGAGTTCCCCTTTGAGAGGAGGCAGATTCC < 41bp 0.702837856281527 0.492391580069611 0.19291961 0.16918403 prediction 0.405675712563055 Functional Loss - GGNBP2 ENSG00000005955 CDS Human other chr17:34901621 chr17:34901624 synonymous SNV . 0 24 hm5C_associated_SNPs_96394 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:34901601-34901625
64251 chr10 12131131 12131131 1 + G A UCEC 12131128 + 12131108 12131148 41 GTGACAATGTTGCCCAATCCCTCGCACCTGGAGGCCGTCAA GTGACAATGTTGCCCAATCCCTCACACCTGGAGGCCGTCAA < 41bp 0.70283678417544 0.456424127449745 0.24536666 0.055791914 prediction 0.405673568350879 Functional Loss - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131128 chr10:12131131 synonymous SNV . 0 24 hm5C_associated_SNPs_96395 0 0 1 BUD13 POSTAR2 ENCODE chr10:12131070-12131181
64251 chr7 143085736 143085736 1 + C T LUAD 143085733 + 143085713 143085753 41 AGTCTGGAGGGGGCGCCGTACTGCGAGGGCTGTTACACTGT AGTCTGGAGGGGGCGCCGTACTGTGAGGGCTGTTACACTGT < 41bp 0.74007085173058 0.537235316534191 0.20193744 0.21476999 prediction 0.405671070392778 Functional Loss - ZYX ENSG00000159840 CDS Human protein_coding chr7:143085733 chr7:143085736 synonymous SNV . 0 24 hm5C_associated_SNPs_96396 0 0 1 LARP7 POSTAR2 ENCODE chr7:143085670-143085741
64251 chr10 8051082 8051082 1 + C T PRAD 8051079 + 8051059 8051099 41 CCCTGCCCCCGAGGCCAAGCCGGCGCCCTCGCAGAACAGGC CCCTGCCCCCGAGGCCAAGCCGGTGCCCTCGCAGAACAGGC < 41bp 0.761264520072063 0.558431376909529 0.86893713 0.3852924 prediction 0.405666286325069 Functional Loss - TAF3 ENSG00000165632 CDS Human protein_coding chr10:8051079 chr10:8051082 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_96399 0 0 1 SF3B1 POSTAR2 ENCODE chr10:8051059-8051101
64251 chr11 66264937 66264937 1 + C T UCEC 66264934 + 66264914 66264954 41 AGCCTGCTCTAGAGCGCTTCCTGCGGAGACTTCAGGTAAGC AGCCTGCTCTAGAGCGCTTCCTGTGGAGACTTCAGGTAAGC < 41bp 0.702828028383992 0.487102175495386 0.24958736 0.13453832 prediction 0.405656056767985 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66264934 chr11:66264937 nonsynonymous SNV 0.947 2 24 hm5C_associated_SNPs_96402 0 0 2 PRPF8 POSTAR2 ENCODE chr11:66264918-66264975
64251 chr19 3762792 3762792 1 + G A PAAD 3762789 + 3762769 3762809 41 CCGCCACTTCCGGAAGACTCCTGGCCCGGGATTATGCCAAG CCGCCACTTCCGGAAGACTCCTGACCCGGGATTATGCCAAG < 41bp 0.702824918688135 0.460151795947792 0.33467448 0.070747495 prediction 0.40564983737627 Functional Loss - MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3762789 chr19:3762792 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_96407 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3762773-3762798
64251 chr19 1105242 1105242 1 + G C SARC 1105238 + 1105218 1105258 41 TCCATGCACGAGTTTTCCGCCAAGGACATCGACGGGCACAT TCCATGCACGAGTTTTCCGCCAAGCACATCGACGGGCACAT < 41bp 0.702822140252297 0.408254421345791 0.4627566 0.3597052 prediction 0.405644280504595 Functional Loss - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1105238 chr19:1105242 unknown 0.963 3 25 hm5C_associated_SNPs_96412 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:1105180-1105260
64251 chr19 13869981 13869981 1 + C T STAD 13869978 + 13869958 13869998 41 CTGGAGCATGGCGAGGCCGACCGCAGCACACTCAAGAAGGC CTGGAGCATGGCGAGGCCGACCGTAGCACACTCAAGAAGGC < 41bp 0.73978050488313 0.536963004534833 0.2895013 0.23510134 prediction 0.405635000696595 Functional Loss - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13869978 chr19:13869981 synonymous SNV . 0 24 hm5C_associated_SNPs_96416 0 0 3 BUD13 POSTAR2 ENCODE chr19:13869730-13870004
64251 chr15 76206478 76206478 1 + C T BLCA 76206475 + 76206455 76206495 41 GAAAAGAACTAGTATGGAAACAGCACTTGCCCTTGAGAAGC GAAAAGAACTAGTATGGAAACAGTACTTGCCCTTGAGAAGC < 41bp 0.772140302294535 0.569325708403619 0.1583454 0.13248378 prediction 0.405629187781833 Functional Loss - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76206475 chr15:76206478 nonsynonymous SNV 0.867 3 24 hm5C_associated_SNPs_96419 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:76206443-76206492
64251 chr8 15480708 15480708 1 + G A CESC 15480705 + 15480685 15480725 41 GCACCACCTCGAAACTATTCCATGATTGTTATGTTCACTGC GCACCACCTCGAAACTATTCCATAATTGTTATGTTCACTGC < 41bp 0.702811298447888 0.467471483127777 0.24793863 0.15915 prediction 0.405622596895777 Functional Loss - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15480705 chr8:15480708 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_96421 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr8:15480695-15480758
64251 chr4 48490497 48490497 1 + C T STAD 48490494 + 48490474 48490514 41 GTGGTCCTTTTCATAATGACCGGCACTATGTTAGGACCTGA GTGGTCCTTTTCATAATGACCGGTACTATGTTAGGACCTGA < 41bp 0.753532571914548 0.55072455772517 0.262705 0.26240396 prediction 0.405616028378756 Functional Loss - SLC10A4 ENSG00000145248 CDS Human protein_coding chr4:48490494 chr4:48490497 synonymous SNV . 0 24 hm5C_associated_SNPs_96422 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:48490488-48490519
64251 chrX 70756122 70756122 1 + C T PCPG 70756119 + 70756099 70756139 41 TTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACA TTTGAGGCAGCTGAGAGACACTGTATGCAGCTCTGGAGACA < 41bp 0.796690045330863 0.59388252970178 0.24429968 0.1608459 prediction 0.405615031258167 Functional Loss - OGT ENSG00000147162 CDS Human protein_coding chrX:70756119 chrX:70756122 synonymous SNV . 0 24 hm5C_associated_SNPs_96424 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:70756121-70756141
64251 chr4 1206203 1206203 1 - G A LGG 1206206 - 1206186 1206226 41 ACCCTCTCCCAGCAGGTACCCTCCGGGCGTGGTGGGCGTGG ACCCTCTCCCAGCAGGTACCCTCTGGGCGTGGTGGGCGTGG < 41bp 0.718646168587532 0.515842967952494 0.88126194 0.18992314 prediction 0.405606401270075 Functional Loss - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206206 chr4:1206203 nonsynonymous SNV 0.001 3 24 hm5C_associated_SNPs_96426 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:1206158-1206209
64251 chr8 90777651 90777651 1 + A T UCEC 90777647 + 90777627 90777667 41 CCCTTGGTGTAAATTACCTGCACAATATGACTCCTCCTTTA CCCTTGGTGTAAATTACCTGCACATTATGACTCCTCCTTTA < 41bp 0.70279916883706 0.354814048591342 0.0046058297 0.0047599077 prediction 0.405598337674119 Functional Loss - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90777647 chr8:90777651 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_96429 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr8:90777646-90777675
64251 chr11 61539148 61539148 1 + G T SARC 61539144 + 61539124 61539164 41 CTCCCCAGGGTCCGCTCTCCCCGGGCCCTGGTTCCTTGCCT CTCCCCAGGGTCCGCTCTCCCCGGTCCCTGGTTCCTTGCCT < 41bp 0.751392207256823 0.54859393871061 0.92731524 0.5161629 prediction 0.405596537092427 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61539144 chr11:61539148 nonsynonymous SNV 0.048 4 25 hm5C_associated_SNPs_96430 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61539142-61539224
64251 chr11 64129432 64129432 1 + G T SARC 64129428 + 64129408 64129448 41 TCCTAAGAAGCGATTGGGCGCGGGGCCCCAGGGGGCACAAG TCCTAAGAAGCGATTGGGCGCGGGTCCCCAGGGGGCACAAG < 41bp 0.751335909316983 0.548537796906981 0.88160914 0.8205736 prediction 0.405596224820003 Functional Loss - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64129428 chr11:64129432 synonymous SNV . 0 25 hm5C_associated_SNPs_96431 0 0 4 DDX24 POSTAR2 ENCODE chr11:64129412-64129439
64251 chr9 131765192 131765192 1 + C T rs562785472 131765189 + 131765169 131765209 41 TGGAGCAGCTGCTCAAAACTCTGCGCTACAACTTCCTGCCT TGGAGCAGCTGCTCAAAACTCTGTGCTACAACTTCCTGCCT < 41bp 0.702797886393782 0.48930253607826 0.8911482 0.8872274 prediction 0.405595772787564 Functional Loss - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131765189 chr9:131765192 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_96432 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131765165-131765196
64251 chr8 57124329 57124329 1 + T C rs143730228 57124328 + 57124308 57124348 41 GATGCGCGCTACTTAAGGTCCTGCTGCGTGAGCCATTGACG GATGCGCGCTACTTAAGGTCCCGCTGCGTGAGCCATTGACG < 41bp 0.702796012236871 0.487682378390572 0.08387855 0.031684995 prediction 0.405592024473742 Functional Loss - CHCHD7 ENSG00000170791 UTR5 Human protein_coding chr8:57124328 chr8:57124329 . . 0 22 hm5C_associated_SNPs_96434 0 0 1 DDX3X POSTAR2 ENCODE chr8:57124324-57124396
64251 chr17 19437294 19437294 1 + G A COAD 19437291 + 19437271 19437311 41 CCCGCGCCAGTGCGCGGAGGCCCGGAGGCCACCCTTGAGGT CCCGCGCCAGTGCGCGGAGGCCCAGAGGCCACCCTTGAGGT < 41bp 0.702795808046916 0.452710239236964 0.89671683 0.6427518 prediction 0.405591616093832 Functional Loss - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19437291 chr17:19437294 synonymous SNV . 0 24 hm5C_associated_SNPs_96435 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:19437267-19437309
64251 chr2 9572814 9572814 1 + G A LUAD 9572811 + 9572791 9572831 41 TTCATGATTGAGATCGCAGGCGTGAAGGTACCCTCTGGCTG TTCATGATTGAGATCGCAGGCGTAAAGGTACCCTCTGGCTG < 41bp 0.824508189352284 0.621712509116681 0.19503179 0.16850162 prediction 0.405591360471206 Functional Loss - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9572811 chr2:9572814 synonymous SNV . 0 24 hm5C_associated_SNPs_96436 0 0 8 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:9572790-9572814
64251 chr7 140386912 140386912 1 + G C rs113604756 140386908 + 140386888 140386928 41 GCAGGCGGACATCTGTGACACTCTGGTGGTGGCCGTGCCAT GCAGGCGGACATCTGTGACACTCTCGTGGTGGCCGTGCCAT < 41bp 0.702794723469606 0.409534308923611 0.234238 0.033918023 prediction 0.405589446939213 Functional Loss - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140386908 chr7:140386912 synonymous SNV . 0 25 hm5C_associated_SNPs_96438 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:140386889-140386918
64251 chr1 227842159 227842159 1 + T C rs151083594 227842158 + 227842138 227842178 41 AATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG AATTTGCACTTAGTGAAAGACCGGAGAACTGTGAATGAAGG < 41bp 0.702794205042036 0.476506229249933 0.19088256 0.2625432 prediction 0.405588410084072 Functional Loss - ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227842158 chr1:227842159 nonsynonymous SNV 0.011 0 22 hm5C_associated_SNPs_96439 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:227842099-227842179
64251 chr13 93879792 93879792 1 + G T DLBC 93879789 + 93879769 93879809 41 CGCCGGGGCGGATGTGAAGGCTCGGAGCTGCGGAGAGGTCC CGCCGGGGCGGATGTGAAGGCTCTGAGCTGCGGAGAGGTCC < 41bp 0.766471460946051 0.563687901236821 0.2103864 0.250482 prediction 0.405567119418461 Functional Loss - GPC6 ENSG00000183098 CDS Human protein_coding chr13:93879789 chr13:93879792 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_96442 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:93879780-93879800
64251 chr8 126445730 126445730 1 + C T OV 126445727 + 126445707 126445747 41 ATGTGCGAAGCCGGAAGAGGCTGCGGGAAGAGGAAGCCGCC ATGTGCGAAGCCGGAAGAGGCTGTGGGAAGAGGAAGCCGCC < 41bp 0.702778486201542 0.477865700405385 0.7872535 0.51002717 prediction 0.405556972403085 Functional Loss - TRIB1 ENSG00000173334 CDS Human protein_coding chr8:126445727 chr8:126445730 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_96447 0 0 2 RBM15 POSTAR2 ENCODE chr8:126445676-126445736
64251 chr9 99220743 99220743 1 + G T SARC 99220739 + 99220719 99220759 41 GGAGGGGATGCTCGAAAGAGCTGAGCGGAGATCCTACAGGG GGAGGGGATGCTCGAAAGAGCTGATCGGAGATCCTACAGGG < 41bp 0.760735334424658 0.557969637914697 0.31572717 0.33838975 prediction 0.405531393019921 Functional Loss - HABP4 ENSG00000130956 CDS Human protein_coding chr9:99220739 chr9:99220743 nonsynonymous SNV 0.897 1 25 hm5C_associated_SNPs_96458 0 0 1 GRWD1 POSTAR2 ENCODE chr9:99220699-99220787
64251 chr2 153575351 153575351 1 + G T LUAD 153575348 + 153575328 153575368 41 TGGTCAGAGCCCAGAAAGCGCTCGGTGCTCCCGCCGGACGG TGGTCAGAGCCCAGAAAGCGCTCTGTGCTCCCGCCGGACGG < 41bp 0.936160123902953 0.733394433131833 0.2775531 0.24798548 prediction 0.405531381542241 Functional Loss - ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575348 chr2:153575351 synonymous SNV . 0 24 hm5C_associated_SNPs_96459 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:153575327-153575353
64251 chr18 32682030 32682030 1 + C T BLCA 32682028 + 32682008 32682048 41 GGAGTATGATCCTGTAGAGGCACGACAAGGGCAAGATGCAA GGAGTATGATCCTGTAGAGGCATGACAAGGGCAAGATGCAA < 41bp 0.702764712264292 0.404396738610465 0.096372604 0.15896466 prediction 0.405529424528584 Functional Loss - MAPRE2 ENSG00000166974 CDS Human protein_coding chr18:32682028 chr18:32682030 stopgain 0.998 1 23 hm5C_associated_SNPs_96461 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:32681994-32682040
64251 chr3 42251344 42251344 1 + G A UCEC 42251341 + 42251321 42251361 41 CCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCTGGA CCCCGGCCCGGTGTGGTCACCAAAGGCTTCCGGACGCTGGA < 41bp 0.702762949264023 0.461846327047764 0.8841859 0.8104276 prediction 0.405525898528046 Functional Loss - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42251341 chr3:42251344 synonymous SNV . 0 24 hm5C_associated_SNPs_96462 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:42251340-42251360
64251 chr11 66433853 66433853 1 + C T rs144112838 66433851 + 66433831 66433871 41 TCAGTTCTGCTAGGGTGAGACCCGAATTTGGATCCCCAACA TCAGTTCTGCTAGGGTGAGACCTGAATTTGGATCCCCAACA < 41bp 0.702758742295792 0.431043321496416 0.55462843 0.5573918 prediction 0.405517484591585 Functional Loss - RBM4 ENSG00000258297 ncRNA_exonic Human antisense chr11:66433851 chr11:66433853 . . 0 23 hm5C_associated_SNPs_96463 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:66433786-66433934
64251 chr3 148741948 148741948 1 + C T STAD 148741945 + 148741925 148741965 41 AAAAGTGAGGCCCATGATCCCAACATGACTCATCCAGAGTT AAAAGTGAGGCCCATGATCCCAATATGACTCATCCAGAGTT < 41bp 0.702756501334715 0.477295443614091 0.18771398 0.083608925 prediction 0.40551300266943 Functional Loss - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148741945 chr3:148741948 nonsynonymous SNV 0.956 1 24 hm5C_associated_SNPs_96464 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:148741940-148741974
64251 chr11 34149040 34149040 1 + G A LIHC 34149037 + 34149017 34149057 41 ATCCTGCAGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTT ATCCTGCAGATGCTGTGAAGCTGAGCCAGGCTGAACTAGTT < 41bp 0.702756182729145 0.461108696514278 0.39247093 0.18879509 prediction 0.40551236545829 Functional Loss - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34149037 chr11:34149040 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_96465 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:34149016-34149053
64251 chr7 33169236 33169236 1 + G C rs184271281 33169232 + 33169212 33169252 41 GAGGGGAGGTGTCCCTTCCGCTGCGGCCGTCGGGTTTCTGC GAGGGGAGGTGTCCCTTCCGCTGCCGCCGTCGGGTTTCTGC < 41bp 0.702754404797153 0.422426317561609 0.17940274 0.16175392 prediction 0.405508809594306 Functional Loss - BBS9 ENSG00000122507 UTR5 Human protein_coding chr7:33169232 chr7:33169236 . . 0 25 hm5C_associated_SNPs_96467 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:33169234-33169261
64251 chr6 137143748 137143748 1 + C T rs73777751 137143746 + 137143726 137143766 41 CTCTAACCGCGCCAGTGTGCCTCCGACTCGGAACGGCTTCC CTCTAACCGCGCCAGTGTGCCTTCGACTCGGAACGGCTTCC < 41bp 0.797699064936678 0.594945822255067 0.21557683 0.23704761 prediction 0.405506485363222 Functional Loss - PEX7 ENSG00000112357 UTR5 Human protein_coding chr6:137143746 chr6:137143748 . . 0 23 hm5C_associated_SNPs_96470 2 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr6:137143742-137143760
64251 chr19 3204137 3204137 1 + G T UCEC 3204134 + 3204114 3204154 41 AGCACGCCTTCCTGCGGGAGCTGGAGACGGTGGGTGCCCCT AGCACGCCTTCCTGCGGGAGCTGTAGACGGTGGGTGCCCCT < 41bp 0.936988470713264 0.734236543890754 0.9095509 0.80495083 prediction 0.40550385364502 Functional Loss - NCLN ENSG00000125912 CDS Human protein_coding chr19:3204134 chr19:3204137 stopgain 0.605 1 24 hm5C_associated_SNPs_96474 0 0 3 NOL12 POSTAR2 ENCODE chr19:3204085-3204138
64251 chr14 23299205 23299205 1 + G T rs74967947 23299201 + 23299181 23299221 41 GGGGGCCCTTTGGGGACGGGCACAGGACCCCTGATCCGGCT GGGGGCCCTTTGGGGACGGGCACATGACCCCTGATCCGGCT < 41bp 0.719470752829094 0.516720117216844 0.5096753 0.36643258 prediction 0.4055012712245 Functional Loss - MRPL52 ENSG00000172590 UTR5 Human protein_coding chr14:23299201 chr14:23299205 . . 0 25 hm5C_associated_SNPs_96475 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:23299176-23299205
64251 chr3 50255272 50255272 1 + G T UCEC 50255270 + 50255250 50255290 41 GCTACTTCACGCTCAACTCACAGGTTCTGACAGGTCAGGGC GCTACTTCACGCTCAACTCACATGTTCTGACAGGTCAGGGC < 41bp 0.702748643868757 0.351682826475305 0.8844472 0.3457461 prediction 0.405497287737514 Functional Loss - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50255270 chr3:50255272 . 0.989 2 23 hm5C_associated_SNPs_96477 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:50255241-50255272
64251 chr18 32889618 32889618 1 + C T CESC 32889616 + 32889596 32889636 41 ACCTAGGGAGGGCATGGAAGCTCAGTGTTCTTCCCACACAC ACCTAGGGAGGGCATGGAAGCTTAGTGTTCTTCCCACACAC < 41bp 0.752168620405985 0.549425447580036 0.46773866 0.12411183 prediction 0.405486345651898 Functional Loss - ZNF271P ENSG00000257267 ncRNA_exonic Human transcribed_unitary_pseudogene chr18:32889616 chr18:32889618 . . 0 23 hm5C_associated_SNPs_96480 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:32889532-32889620
64251 chr19 19166187 19166187 1 + G T PAAD 19166185 + 19166165 19166205 41 CCATCGTGGCTGCTATGACCCAGCATCTGACCAGCCCCCAG CCATCGTGGCTGCTATGACCCATCATCTGACCAGCCCCCAG < 41bp 0.919983540077122 0.717249011598096 0.41733634 0.06664881 prediction 0.405469056958052 Functional Loss - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166185 chr19:19166187 nonsynonymous SNV 0.987 0 23 hm5C_associated_SNPs_96487 0 0 3 FXR2 POSTAR2 ENCODE chr19:19166120-19166193
64251 chr4 40104392 40104392 1 + G T UCEC 40104390 + 40104370 40104410 41 TACCAGGTACAGGTGGGGATCAGAAATCTACTCGGGTCTCT TACCAGGTACAGGTGGGGATCATAAATCTACTCGGGTCTCT < 41bp 0.702732217267849 0.358241107724812 0.41789818 0.3308035 prediction 0.405464434535699 Functional Loss - N4BP2 ENSG00000078177 CDS Human protein_coding chr4:40104390 chr4:40104392 nonsynonymous SNV 0.152 1 23 hm5C_associated_SNPs_96493 0 0 1 EIF3H POSTAR2 ENCODE chr4:40104355-40104412
64251 chr19 50881960 50881960 1 + G T UCEC 50881958 + 50881938 50881978 41 CCGGGGAAGGCGAGGGTGTCCAGCTAACAGCGGCTCAAGAA CCGGGGAAGGCGAGGGTGTCCATCTAACAGCGGCTCAAGAA < 41bp 0.702716744791387 0.348651646086669 0.86283696 0.56090987 prediction 0.405433489582774 Functional Loss - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881958 chr19:50881960 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_96502 0 0 2 METAP2 POSTAR2 ENCODE chr19:50881904-50881968
64251 chr15 64426924 64426924 1 + A T LUAD 64426920 + 64426900 64426940 41 GGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCC GGCAGGATGCCCAAGCCACACTGCTGAAGAAGCGGGAGGCC < 41bp 0.915944898802899 0.71324006351562 0.34998807 0.42705238 prediction 0.405409670574559 Functional Loss - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64426920 chr15:64426924 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_96505 0 0 9 BUD13 POSTAR2 ENCODE chr15:64426829-64426930
64251 chr2 74784039 74784039 1 + G A rs200035741 74784036 + 74784016 74784056 41 TGACTACGCTGTGCCACCCCCTCGGAGCACAAAGCCCCTCC TGACTACGCTGTGCCACCCCCTCAGAGCACAAAGCCCCTCC < 41bp 0.831574588675671 0.628875141281401 0.068638325 0.011330187 prediction 0.405398894788539 Functional Loss - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74784036 chr2:74784039 nonsynonymous SNV 0.968 2 24 hm5C_associated_SNPs_96507 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:74784017-74784043
64251 chr3 127788405 127788405 1 + G T COAD 127788402 + 127788382 127788422 41 CTTCCTAGGCGCCATTGGGTCTGGAACCGGGATCCTGCTCG CTTCCTAGGCGCCATTGGGTCTGTAACCGGGATCCTGCTCG < 41bp 0.937046844237994 0.734349409318332 0.40953565 0.06278065 prediction 0.405394869839325 Functional Loss - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127788402 chr3:127788405 nonsynonymous SNV 0.051 4 24 hm5C_associated_SNPs_96508 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:127788345-127788415
64251 chr3 9974537 9974537 1 + C T BLCA 9974535 + 9974515 9974555 41 CTCTTGAAACAGGACGTCCGCTCGGGGGGTGAGTGGGAGCA CTCTTGAAACAGGACGTCCGCTTGGGGGGTGAGTGGGAGCA < 41bp 0.816263473094779 0.613566909433788 0.2269691 0.31840873 prediction 0.405393127321981 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9974535 chr3:9974537 nonsynonymous SNV 0.878 0 23 hm5C_associated_SNPs_96510 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:9974517-9974583
64251 chr11 63753983 63753983 1 + G T CESC 63753981 + 63753961 63754001 41 GGAGCCGCTGGGCAGCGACTCCGAAGGTACAGATCCAAGGA GGAGCCGCTGGGCAGCGACTCCTAAGGTACAGATCCAAGGA < 41bp 0.702693722283714 0.438899460051177 0.17971644 0.16722515 prediction 0.405387444567428 Functional Loss - OTUB1 ENSG00000167770;ENSG00000256100 CDS Human other chr11:63753981 chr11:63753983 stopgain 0.972 0 23 hm5C_associated_SNPs_96512 0 0 12 DDX3X POSTAR2 ENCODE chr11:63753914-63753987
64251 chr15 57999163 57999163 1 + G C rs376028082 57999159 + 57999139 57999179 41 ACTTTTGCGCAACGAGTAAGCTGGGGTCCCGCGGAGTCTCC ACTTTTGCGCAACGAGTAAGCTGGCGTCCCGCGGAGTCTCC < 41bp 0.890250791382032 0.687557495406635 0.8940792 0.8676477 prediction 0.405386591950794 Functional Loss - GCOM1;POLR2M ENSG00000255529 UTR3 Human protein_coding chr15:57999159 chr15:57999163 . . 0 25 hm5C_associated_SNPs_96513 0 0 3 BUD13 POSTAR2 ENCODE chr15:57999145-57999199
64251 chr1 180243540 180243540 1 + G A rs532838415 180243537 + 180243517 180243557 41 TTGCTCAATGGGCTGGATTACACGGTGGACAGTAATTTGGG TTGCTCAATGGGCTGGATTACACAGTGGACAGTAATTTGGG < 41bp 0.807611653154614 0.604924294940447 0.39800566 0.21955746 prediction 0.405374716428335 Functional Loss - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180243537 chr1:180243540 synonymous SNV . 0 24 hm5C_associated_SNPs_96518 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:180243538-180243561
64251 chrX 48652320 48652320 1 + G T SARC 48652318 + 48652298 48652338 41 CACAGGAGCAGCCGAAGGACCAGCTGGTGGCTTTATGGTGG CACAGGAGCAGCCGAAGGACCATCTGGTGGCTTTATGGTGG < 41bp 0.702682548946259 0.348644274626924 0.13185126 0.109849244 prediction 0.405365097892518 Functional Loss - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652318 chrX:48652320 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_96523 0 0 3 DDX55 POSTAR2 ENCODE chrX:48652276-48652323
64251 chr1 158064602 158064602 1 + G T LUAD 158064599 + 158064579 158064619 41 CCCAGCTCAACACCTATAGCCGGGGCCCTGCCTCTGACTAT CCCAGCTCAACACCTATAGCCGGTGCCCTGCCTCTGACTAT < 41bp 0.702678967294261 0.294963231105922 0.9392023 0.22514579 prediction 0.405357934588522 Functional Loss - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158064599 chr1:158064602 nonsynonymous SNV 0.313 2 24 hm5C_associated_SNPs_96526 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158064570-158064664
64251 chrX 110970177 110970177 1 + G A UCEC 110970174 + 110970154 110970194 41 AGCACAGTATGCATTATGGGCACGATCCTCCAATGCACTAC AGCACAGTATGCATTATGGGCACAATCCTCCAATGCACTAC < 41bp 0.788397142062521 0.585719390652079 0.106247306 0.0650394 prediction 0.405355502820884 Functional Loss - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110970174 chrX:110970177 nonsynonymous SNV 0.537 0 24 hm5C_associated_SNPs_96529 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:110970159-110970189
64251 chr19 18685889 18685889 1 + C T COAD 18685887 + 18685867 18685907 41 GTGCTATGCTCGCCTTCACCCTCGTGCTGTCAACTGCCGCA GTGCTATGCTCGCCTTCACCCTTGTGCTGTCAACTGCCGCA < 41bp 0.852456486702308 0.649779832101413 0.13123623 0.15488559 prediction 0.405353309201789 Functional Loss - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18685887 chr19:18685889 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_96530 0 0 57 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:18685860-18685900
64251 chr18 19079942 19079942 1 + G A LIHC 19079939 + 19079919 19079959 41 ACCCAGGACCCTCCCATGGCCGGGACAGCCCATCAGAGGCT ACCCAGGACCCTCCCATGGCCGGAACAGCCCATCAGAGGCT < 41bp 0.825638112076679 0.622962096291561 0.5208005 0.31056428 prediction 0.405352031570237 Functional Loss - GREB1L ENSG00000141449 CDS Human protein_coding chr18:19079939 chr18:19079942 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_96531 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:19079885-19079945
64251 chr2 44933480 44933480 1 + G A UCEC 44933477 + 44933457 44933497 41 ATGACATGCTTGGCTGGGCTCATGGTAGGTCTTTTCTCCAT ATGACATGCTTGGCTGGGCTCATAGTAGGTCTTTTCTCCAT < 41bp 0.702675710656258 0.470843139667436 0.7435707 0.57678235 prediction 0.405351421312515 Functional Loss - CAMKMT ENSG00000143919 CDS Human protein_coding chr2:44933477 chr2:44933480 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96533 0 0 2 PRPF8 POSTAR2 ENCODE chr2:44933437-44933516
64251 chr7 135312781 135312781 1 + G T UCEC 135312778 + 135312758 135312798 41 ACCCCAGTGGATCGCTACCGCCAGATTCTCCTCCCAGCTCT ACCCCAGTGGATCGCTACCGCCATATTCTCCTCCCAGCTCT < 41bp 0.702674874730685 0.30751877902711 0.8724965 0.8037709 prediction 0.405349749461371 Functional Loss - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312778 chr7:135312781 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_96534 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:135312748-135312781
64251 chr16 1551745 1551745 1 + G T SARC 1551741 + 1551721 1551761 41 GGATGGCGGCGTCCCCCAAGCACAGCTGGCGGGCTCTGACT GGATGGCGGCGTCCCCCAAGCACATCTGGCGGGCTCTGACT < 41bp 0.72408666785694 0.521415245778108 0.1606336 0.15469801 prediction 0.405342844157665 Functional Loss - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551741 chr16:1551745 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_96537 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr16:1551742-1551764
64251 chr8 6614836 6614836 1 + G A SKCM 6614833 + 6614813 6614853 41 AGGCATGCTTATGACCGATGCTGGAAGGAAGCTGTATGTGA AGGCATGCTTATGACCGATGCTGAAAGGAAGCTGTATGTGA < 41bp 0.778936412459778 0.576267845141892 0.16577318 0.18785745 prediction 0.405337134635771 Functional Loss - AGPAT5 ENSG00000155189 CDS Human protein_coding chr8:6614833 chr8:6614836 nonsynonymous SNV 0.877 4 24 hm5C_associated_SNPs_96539 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:6614698-6614926
64251 chr14 75904644 75904644 1 + G A UCEC 75904641 + 75904621 75904661 41 GCTATGATGCCTGGGCAGATCCCGGACCCTTCGGTGACCAC GCTATGATGCCTGGGCAGATCCCAGACCCTTCGGTGACCAC < 41bp 0.809573703934903 0.606905539100931 0.917754 0.4716398 prediction 0.405336329667945 Functional Loss - JDP2 ENSG00000140044 CDS Human protein_coding chr14:75904641 chr14:75904644 synonymous SNV . 0 24 hm5C_associated_SNPs_96540 0 0 1 DDX3X POSTAR2 ENCODE chr14:75904600-75904756
64251 chr11 64034673 64034673 1 + A C UCEC 64034669 + 64034649 64034689 41 CCCTGTAGCTGGAGGAGGCCCAGAAGCAGCGGCATGACCGT CCCTGTAGCTGGAGGAGGCCCAGACGCAGCGGCATGACCGT < 41bp 0.702666095929052 0.293343019718791 0.58906835 0.81915665 prediction 0.405332191858103 Functional Loss - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64034669 chr11:64034673 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_96544 0 0 2 PPIG POSTAR2 ENCODE chr11:64034657-64034675
64251 chr1 33747327 33747327 1 + C T UCEC 33747324 + 33747304 33747344 41 CCTCCTACCTGGCCCAGCACCTGCGCATCCACCTGGGCGTC CCTCCTACCTGGCCCAGCACCTGTGCATCCACCTGGGCGTC < 41bp 0.724103488659883 0.521438474371971 0.12399241 0.06816417 prediction 0.405330028575824 Functional Loss - ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33747324 chr1:33747327 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96545 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:33747325-33747373
64251 chr3 101476732 101476732 1 + T C rs77015203 101476731 + 101476711 101476751 41 CTGAGGCTGCAGGGCATTAACTTGGGCCTAGAAGATGATGG CTGAGGCTGCAGGGCATTAACCTGGGCCTAGAAGATGATGG < 41bp 0.702664284501068 0.448459302627131 0.44766462 0.8731268 prediction 0.405328569002135 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101476731 chr3:101476732 synonymous SNV . 0 22 hm5C_associated_SNPs_96547 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:101476665-101476760
64251 chr4 41940649 41940649 1 + G T COAD 41940647 + 41940627 41940667 41 GATGACCAATAAACTGGACACGGCAATGTGGCTTTCTCGCT GATGACCAATAAACTGGACACGTCAATGTGGCTTTCTCGCT < 41bp 0.702662487951989 0.377591914498356 0.02489835 0.01378274 prediction 0.405324975903979 Functional Loss - TMEM33 ENSG00000109133 CDS Human protein_coding chr4:41940647 chr4:41940649 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_96549 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:41940625-41940661
64251 chr19 1251880 1251880 1 + G C LUSC 1251879 + 1251859 1251899 41 CAGTCCGTGATGCAAGCTCTCGAGAGTCTCACGGAGACGCA CAGTCCGTGATGCAAGCTCTCCAGAGTCTCACGGAGACGCA < 41bp 0.903951019036471 0.701291567498958 0.9037564 0.87689495 prediction 0.405318903075026 Functional Loss - MIDN ENSG00000167470 CDS Human protein_coding chr19:1251879 chr19:1251880 nonsynonymous SNV 0.862 3 22 hm5C_associated_SNPs_96552 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:1251856-1251882
64251 chr11 61539128 61539128 1 + C T UCEC 61539126 + 61539106 61539146 41 CCCCATCGCCACCCTGGCCTCCCCAGGGTCCGCTCTCCCCG CCCCATCGCCACCCTGGCCTCCTCAGGGTCCGCTCTCCCCG < 41bp 0.702656130885205 0.408889080754968 0.16156042 0.05309382 prediction 0.405312261770411 Functional Loss - MYRF ENSG00000124920 CDS Human protein_coding chr11:61539126 chr11:61539128 synonymous SNV . 0 23 hm5C_associated_SNPs_96558 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61539079-61539142
64251 chr6 26468722 26468722 1 + C T rs145758816 26468720 + 26468700 26468740 41 CTCACAGGAGCCAATGGGGTCACGGTGCCTGAAGAGGGCCT CTCACAGGAGCCAATGGGGTCATGGTGCCTGAAGAGGGCCT < 41bp 0.816599319641204 0.613948074042448 0.2875862 0.40104344 prediction 0.405302491197512 Functional Loss - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468720 chr6:26468722 nonsynonymous SNV 0.026 0 23 hm5C_associated_SNPs_96563 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr6:26468709-26468741
64251 chrX 23685820 23685820 1 + C T UCEC 23685817 + 23685797 23685837 41 GCTGGGAGACAGAGGAGAGGCCCCGGACTCGCGAAGAGGAG GCTGGGAGACAGAGGAGAGGCCCTGGACTCGCGAAGAGGAG < 41bp 0.702651095803026 0.496346637147981 0.37525594 0.4536964 prediction 0.405302191606052 Functional Loss - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685817 chrX:23685820 nonsynonymous SNV 0.672 1 24 hm5C_associated_SNPs_96564 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:23685740-23685820
64251 chr14 103995543 103995543 1 + C T rs576996356 103995541 + 103995521 103995561 41 GGAGCCGGAAGTGTTGTGGCCGCCGCCGCCGCGCGTCGCGG GGAGCCGGAAGTGTTGTGGCCGTCGCCGCCGCGCGTCGCGG < 41bp 0.721030987889951 0.518381838462964 0.37753242 0.40808988 prediction 0.405298298853974 Functional Loss - TRMT61A ENSG00000166166 UTR5 Human protein_coding chr14:103995541 chr14:103995543 . . 0 23 hm5C_associated_SNPs_96565 0 0 1 DDX3X POSTAR2 ENCODE chr14:103995533-103995599
64251 chr19 13264125 13264125 1 + G T UCEC 13264121 + 13264101 13264141 41 TGCAGCTGTCGCTGGTCATGCGCAGCGCCCGGGAGCTCTAC TGCAGCTGTCGCTGGTCATGCGCATCGCCCGGGAGCTCTAC < 41bp 0.749153305949821 0.546505702034973 0.40895578 0.16965824 prediction 0.405295207829696 Functional Loss - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264121 chr19:13264125 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_96567 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:13264112-13264133
64251 chr2 220110800 220110800 1 + G T LUSC 220110797 + 220110777 220110817 41 GCTACCTCTTCATCCAGAAACTGGGGGAGGGGTGAGTGTTT GCTACCTCTTCATCCAGAAACTGTGGGAGGGGTGAGTGTTT < 41bp 0.702645426172884 0.351841598162356 0.7974216 0.48794872 prediction 0.405290852345768 Functional Loss - STK16 ENSG00000115661 CDS Human protein_coding chr2:220110797 chr2:220110800 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_96569 0 0 1 BUD13 POSTAR2 ENCODE chr2:220110788-220110847
64251 chr8 146280802 146280802 1 + C T rs6986329 146280800 + 146280780 146280820 41 AGTGTGAGCCTTCTCTTATGCCCGGACAGGGCCACCAGAGG AGTGTGAGCCTTCTCTTATGCCTGGACAGGGCCACCAGAGG < 41bp 0.702642740055904 0.487100786245158 0.10803959 0.10095832 prediction 0.405285480111809 Functional Loss - C8orf33 ENSG00000182307 UTR3 Human protein_coding chr8:146280800 chr8:146280802 . . 0 23 hm5C_associated_SNPs_96572 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146280719-146280895
64251 chr11 66282000 66282000 1 + G T UCEC 66281996 + 66281976 66282016 41 GCTGCTGCTGCCACCTTCCTCATGGAGCAACATGAGCCCCG GCTGCTGCTGCCACCTTCCTCATGTAGCAACATGAGCCCCG < 41bp 0.740178620162669 0.537539505219339 0.89307755 0.7652101 prediction 0.40527822988666 Functional Loss - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66281996 chr11:66282000 stopgain 0.996 0 25 hm5C_associated_SNPs_96575 0 0 1 PPIG POSTAR2 ENCODE chr11:66281981-66282045
64251 chr19 38024289 38024289 1 + G T LUAD 38024287 + 38024267 38024307 41 GGATTGGTGAGGCAGCATGCCCGGGCTGCCACTGTTGGGGT GGATTGGTGAGGCAGCATGCCCTGGCTGCCACTGTTGGGGT < 41bp 0.702636764459623 0.343626264068297 0.33700067 0.025582105 prediction 0.405273528919246 Functional Loss - ZNF793 ENSG00000188227 CDS Human protein_coding chr19:38024287 chr19:38024289 synonymous SNV . 0 23 hm5C_associated_SNPs_96579 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:38024260-38024290
64251 chr17 30815229 30815229 1 + G A UCEC 30815226 + 30815206 30815246 41 TGGCAGGACCAGGGCTTCATCACGCCGGCCAACGTGGTCTT TGGCAGGACCAGGGCTTCATCACACCGGCCAACGTGGTCTT < 41bp 0.831396485227546 0.628761719336703 0.9290025 0.8877717 prediction 0.405269531781686 Functional Loss - CDK5R1 ENSG00000176749 CDS Human protein_coding chr17:30815226 chr17:30815229 synonymous SNV . 0 24 hm5C_associated_SNPs_96581 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:30815209-30815229
64251 chr16 66918543 66918543 1 + C T COAD 66918540 + 66918520 66918560 41 CAACCAGCTGGCTGCCAATTCCCCAGTGGAGGACCGGCGAG CAACCAGCTGGCTGCCAATTCCCTAGTGGAGGACCGGCGAG < 41bp 0.794828611791504 0.592196565752437 0.1263462 0.056295812 prediction 0.405264092078135 Functional Loss - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918540 chr16:66918543 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_96582 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:66918540-66918560
64251 chr9 117029830 117029830 1 + G T LUAD 117029828 + 117029808 117029848 41 CCGGGCCTTCCTGGGGAAGCCGGGATGAAGGTGAGGTGGGA CCGGGCCTTCCTGGGGAAGCCGTGATGAAGGTGAGGTGGGA < 41bp 0.702631201061136 0.365359146202022 0.89879614 0.75706065 prediction 0.405262402122271 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117029828 chr9:117029830 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_96585 0 0 9 BUD13 POSTAR2 ENCODE chr9:117029812-117029837
64251 chr16 681361 681361 1 + G T SARC 681359 + 681339 681379 41 ACCCGGGCGTGTGCCCCAACCAGCTCAGCCCCAACCTGTGG ACCCGGGCGTGTGCCCCAACCATCTCAGCCCCAACCTGTGG < 41bp 0.702630294464711 0.350698124454857 0.3749568 0.0877485 prediction 0.405260588929421 Functional Loss - WFIKKN1 ENSG00000127578 CDS Human protein_coding chr16:681359 chr16:681361 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_96586 0 0 1 DDX3X POSTAR2 ENCODE chr16:681308-681392
64251 chr3 50655066 50655066 1 + T C COAD 50655065 + 50655045 50655085 41 GTTGCACCCGGCGGACCCGGCTTGGGCGGTGCTCCGGGGGG GTTGCACCCGGCGGACCCGGCCTGGGCGGTGCTCCGGGGGG < 41bp 0.80188996866842 0.599268071302951 0.70388603 0.73411655 prediction 0.405243794730937 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50655065 chr3:50655066 synonymous SNV . 0 22 hm5C_associated_SNPs_96595 0 0 2 DDX55 POSTAR2 ENCODE chr3:50655005-50655141
64251 chr13 98086847 98086847 1 + C T LUSC 98086844 + 98086824 98086864 41 CCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGA CCCACCATCGAGGACTTCTACCGTAAGGAGATCGAGGTGGA < 41bp 0.70261555759519 0.486838911868773 0.078935325 0.049381196 prediction 0.40523111519038 Functional Loss - RAP2A ENSG00000125249 CDS Human protein_coding chr13:98086844 chr13:98086847 synonymous SNV . 0 24 hm5C_associated_SNPs_96602 0 0 1 GRWD1 POSTAR2 ENCODE chr13:98086798-98087127
64251 chr7 148947810 148947810 1 + C T SKCM 148947807 + 148947787 148947827 41 GAGAATGATGGCGTCTGTTTCACCGAGCAGGAATGGGAGAA GAGAATGATGGCGTCTGTTTCACTGAGCAGGAATGGGAGAA < 41bp 0.70261455382164 0.482115042829855 0.8323072 0.691234 prediction 0.405229107643279 Functional Loss - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148947807 chr7:148947810 synonymous SNV . 0 24 hm5C_associated_SNPs_96603 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr7:148947787-148947825
64251 chr15 66618592 66618592 1 + G A BRCA 66618589 + 66618569 66618609 41 CACTGGGTCGCCAAAAAGATCTGGGAGAGCTTCCCTCATCA CACTGGGTCGCCAAAAAGATCTGAGAGAGCTTCCCTCATCA < 41bp 0.831680855424502 0.629066697688739 0.6557458 0.2731381 prediction 0.405228315471525 Functional Loss - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66618589 chr15:66618592 stopgain 1.000 0 24 hm5C_associated_SNPs_96604 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:66618586-66618610
64251 chr2 237998594 237998594 1 + C T UCEC 237998592 + 237998572 237998612 41 TCTATACAACCATCAACGCTCACCAGTGGTCTGAGACGGTC TCTATACAACCATCAACGCTCATCAGTGGTCTGAGACGGTC < 41bp 0.879208870357362 0.676605464281331 0.13991144 0.15403888 prediction 0.405206812152061 Functional Loss - COPS8 ENSG00000198612 CDS Human protein_coding chr2:237998592 chr2:237998594 synonymous SNV . 0 23 hm5C_associated_SNPs_96608 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:237998583-237998615
64251 chr1 171759689 171759689 1 + G T KIRC 171759687 + 171759667 171759707 41 AGTCCATTGATAAGAGTTACCTGTGTTGTGAACACCACAAA AGTCCATTGATAAGAGTTACCTTTGTTGTGAACACCACAAA < 41bp 0.702599178691395 0.35399119515366 0.20468417 0.093072236 prediction 0.40519835738279 Functional Loss - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171759687 chr1:171759689 synonymous SNV . 0 23 hm5C_associated_SNPs_96612 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:171759681-171759696
64251 chr17 4686202 4686202 1 + G A SKCM 4686199 + 4686179 4686219 41 GGATCGGTGCGAGGCGCCCCCTCGCGTGGTCCCCTGGAATG GGATCGGTGCGAGGCGCCCCCTCACGTGGTCCCCTGGAATG < 41bp 0.83469641212614 0.632100688176224 0.36208445 0.20028332 prediction 0.405191447899832 Functional Loss - TM4SF5 ENSG00000142484 CDS Human protein_coding chr17:4686199 chr17:4686202 nonsynonymous SNV 0.172 0 24 hm5C_associated_SNPs_96615 0 0 5 PRPF8 POSTAR2 ENCODE chr17:4686185-4686207
64251 chr19 19790292 19790292 1 + G A UCEC 19790289 + 19790269 19790309 41 ACGGCGCACAGTAACACCAACTCGAAAGAGACCTTATGAAT ACGGCGCACAGTAACACCAACTCAAAAGAGACCTTATGAAT < 41bp 0.810726768630682 0.60813107180737 0.26881665 0.08584076 prediction 0.405191393646624 Functional Loss - ZNF101 ENSG00000181896 CDS Human protein_coding chr19:19790289 chr19:19790292 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_96616 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19790260-19790314
64251 chr20 4680122 4680122 1 + G A SKCM 4680119 + 4680099 4680139 41 GTGGTGGCTGGGGACAGCCTCATGGTGGTGGCTGGGGTCAA GTGGTGGCTGGGGACAGCCTCATAGTGGTGGCTGGGGTCAA < 41bp 0.819562539900529 0.616968982333167 0.88165045 0.69320726 prediction 0.405187115134723 Functional Loss - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680119 chr20:4680122 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_96621 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:4680111-4680140
64251 chr1 17296805 17296805 1 + C T UCEC 17296802 + 17296782 17296822 41 CCCTGAACACCGTCCAGAAGCTGCAAGACGAGCGGCGGCTG CCCTGAACACCGTCCAGAAGCTGTAAGACGAGCGGCGGCTG < 41bp 0.745403656494831 0.542814629438299 0.80846906 0.7990892 prediction 0.405178054113064 Functional Loss - CROCC ENSG00000058453 CDS Human protein_coding chr1:17296802 chr1:17296805 stopgain 0.991 0 24 hm5C_associated_SNPs_96625 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:17296805-17296838
64251 chrX 153657425 153657425 1 + G A SKCM 153657422 + 153657402 153657442 41 GGGCTCCTGCGGCCGACACTCATGAAGGCCACATCACCAGC GGGCTCCTGCGGCCGACACTCATAAAGGCCACATCACCAGC < 41bp 0.826660761457891 0.62407252529116 0.34849912 0.23180345 prediction 0.405176472333462 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153657422 chrX:153657425 nonsynonymous SNV 0.421 3 24 hm5C_associated_SNPs_96626 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:153657400-153657433
64251 chr4 166389003 166389003 1 + C T LIHC 166389001 + 166388981 166389021 41 AAGAAAATTGTGGATCAAAACACAAAGGTAGTGACCACGGG AAGAAAATTGTGGATCAAAACATAAAGGTAGTGACCACGGG < 41bp 0.702582108738835 0.413545180998954 0.19625172 0.22661439 prediction 0.40516421747767 Functional Loss - CPE ENSG00000109472 CDS Human protein_coding chr4:166389001 chr4:166389003 nonsynonymous SNV 0.909 0 23 hm5C_associated_SNPs_96630 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:166388975-166389003
64251 chr15 25312023 25312023 1 + C T rs143641318 25312021 + 25312001 25312041 41 GGCGAGAGACAGTGTCTGGTCACGACATTATATGCCCCGTA GGCGAGAGACAGTGTCTGGTCATGACATTATATGCCCCGTA < 41bp 0.702580658239561 0.470298628048888 0.24892706 0.20347038 prediction 0.405161316479121 Functional Loss - SNHG14 ENSG00000224078 ncRNA_intronic Human processed_transcript chr15:25312021 chr15:25312023 . . 0 23 hm5C_associated_SNPs_96633 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr15:25312018-25312039
64251 chr15 25312024 25312024 1 + G A rs11636488 25312021 + 25312001 25312041 41 GGCGAGAGACAGTGTCTGGTCACGACATTATATGCCCCGTA GGCGAGAGACAGTGTCTGGTCACAACATTATATGCCCCGTA < 41bp 0.702580658239561 0.454711872465888 0.24892706 0.118840784 prediction 0.405161316479121 Functional Loss - SNHG14 ENSG00000224078 ncRNA_intronic Human processed_transcript chr15:25312021 chr15:25312024 . . 0 24 hm5C_associated_SNPs_96634 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr15:25312018-25312039
64251 chr18 12325245 12325245 1 + A T LUSC 12325241 + 12325221 12325261 41 TCAGGCATGGGCACGCTGCTCATCAGCAAGATCCGTGAGGA TCAGGCATGGGCACGCTGCTCATCTGCAAGATCCGTGAGGA < 41bp 0.702575699929876 0.373663524668552 0.13149664 0.16337404 prediction 0.405151399859752 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325241 chr18:12325245 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_96639 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr18:12325235-12325273
64251 chr1 90178646 90178646 1 + C T ESCA 90178644 + 90178624 90178664 41 TTTTGACTCTCCTTGGACCACACGGGCTTTATCTGAAGTGT TTTTGACTCTCCTTGGACCACATGGGCTTTATCTGAAGTGT < 41bp 0.702574080895711 0.438577171444631 0.07980242 0.10795191 prediction 0.405148161791421 Functional Loss - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90178644 chr1:90178646 nonsynonymous SNV 0.988 4 23 hm5C_associated_SNPs_96642 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:90178623-90178647
64251 chr3 5025133 5025133 1 + C T STAD 5025130 + 5025110 5025150 41 CTTCTACCTGATCCCACCTTCAGCGACTGCCTACCTGCCCA CTTCTACCTGATCCCACCTTCAGTGACTGCCTACCTGCCCA < 41bp 0.729248988847211 0.526675148350866 0.62865764 0.24871197 prediction 0.40514768099269 Functional Loss - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025130 chr3:5025133 nonsynonymous SNV 0.953 5 24 hm5C_associated_SNPs_96644 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:5025061-5025145
64251 chr15 74324955 74324955 1 + G T OV 74324952 + 74324932 74324972 41 TGAAGGCCCAGGTTCAGGCCCTGGGGCTGGCTGAAGCCCAG TGAAGGCCCAGGTTCAGGCCCTGTGGCTGGCTGAAGCCCAG < 41bp 0.702573487442225 0.340300060603321 0.70286125 0.39266437 prediction 0.405146974884451 Functional Loss - PML ENSG00000140464 CDS Human protein_coding chr15:74324952 chr15:74324955 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_96645 0 0 1 FXR2 POSTAR2 ENCODE chr15:74324912-74325002
64251 chr3 127323800 127323800 1 + G A UCEC 127323797 + 127323777 127323817 41 CGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCGAGGAGGA CGCCGCCAGGTGGAGCGGGCCACAGAGGACGGCGAGGAGGA < 41bp 0.823583818884435 0.621012403299317 0.7675717 0.5576245 prediction 0.405142831170236 Functional Loss - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127323797 chr3:127323800 synonymous SNV . 0 24 hm5C_associated_SNPs_96646 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr3:127323776-127323800
64251 chr21 45213265 45213265 1 + C T HNSC 45213262 + 45213242 45213282 41 AGTGGACGGGCATTGACAGGCTGCGCCTGGATAAATTCTAC AGTGGACGGGCATTGACAGGCTGTGCCTGGATAAATTCTAC < 41bp 0.721146617413791 0.518575297853653 0.041358024 0.055719495 prediction 0.405142639120275 Functional Loss - RRP1 ENSG00000160214 CDS Human protein_coding chr21:45213262 chr21:45213265 nonsynonymous SNV 0.486 4 24 hm5C_associated_SNPs_96648 1 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45213221-45213269
64251 chr17 5257753 5257753 1 + G A CESC 5257750 + 5257730 5257770 41 CAGTAGTGTGTGCTTTAACTCAAGAAGAATCTTCAGCCCAG CAGTAGTGTGTGCTTTAACTCAAAAAGAATCTTCAGCCCAG < 41bp 0.802886724586086 0.600318181855728 0.8702438 0.29250824 prediction 0.405137085460717 Functional Loss - RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5257750 chr17:5257753 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_96650 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:5257718-5257754
64251 chr20 49575502 49575502 1 + A T LUAD 49575498 + 49575478 49575518 41 GGCTGAGCAGGAACCGCAGCCAGAACGGCTGGTTCCGGTGT GGCTGAGCAGGAACCGCAGCCAGATCGGCTGGTTCCGGTGT < 41bp 0.876113352052445 0.673554354886941 0.7606665 0.8689835 prediction 0.405117994331008 Functional Loss - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575498 chr20:49575502 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_96658 0 0 2 GRWD1 POSTAR2 ENCODE chr20:49575402-49575524
64251 chr21 37785354 37785354 1 + G A SKCM 37785351 + 37785331 37785371 41 AGACACATCGAGGGTCTTCGCCAGGACCCAGACCGGTAGAG AGACACATCGAGGGTCTTCGCCAAGACCCAGACCGGTAGAG < 41bp 0.702554604488682 0.467046478039196 0.51392376 0.28324038 prediction 0.405109208977364 Functional Loss - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785351 chr21:37785354 nonsynonymous SNV 0.807 0 24 hm5C_associated_SNPs_96660 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:37785323-37785383
64251 chr17 79639146 79639146 1 + G T UCEC 79639142 + 79639122 79639162 41 TGAGGTTGTCCTGCAGCCCCCAGAGCTGACTGCCAGGCCCC TGAGGTTGTCCTGCAGCCCCCAGATCTGACTGCCAGGCCCC < 41bp 0.7115146814736 0.508965270339998 0.42964435 0.3719293 prediction 0.405098822267204 Functional Loss - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79639142 chr17:79639146 nonsynonymous SNV 0.934 1 25 hm5C_associated_SNPs_96665 0 0 6 DDX24 POSTAR2 ENCODE chr17:79639117-79639161
64251 chr11 63988119 63988119 1 + A C rs138031026 63988118 + 63988098 63988138 41 GCCTCGTTGCCCCCCGTTTCCAGCGAAAGTTCAAGGCCAAG GCCTCGTTGCCCCCCGTTTCCCGCGAAAGTTCAAGGCCAAG < 41bp 0.702548072606403 0.430675376091045 0.8378997 0.36756724 prediction 0.405096145212805 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63988118 chr11:63988119 nonsynonymous SNV 0.992 2 22 hm5C_associated_SNPs_96667 0 0 1 RPS3 POSTAR2 ENCODE chr11:63988086-63988122
64251 chr1 32049152 32049152 1 + G A STAD 32049149 + 32049129 32049169 41 GGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGA GGCACCATCCGCCCATCTTCCTCAGTCATGAACATGCATGA < 41bp 0.820081649015733 0.617533577536316 0.1373345 0.119709164 prediction 0.405096142958834 Functional Loss - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32049149 chr1:32049152 synonymous SNV . 0 24 hm5C_associated_SNPs_96668 0 0 2 PPIG POSTAR2 ENCODE chr1:32049060-32049156
64251 chr8 28919816 28919816 1 + C T rs138319366 28919814 + 28919794 28919834 41 TAGAGGGATCAGGGTGTCTGCTCGGGAGGGCTTGGGAAAGC TAGAGGGATCAGGGTGTCTGCTTGGGAGGGCTTGGGAAAGC < 41bp 0.784290879287217 0.581744529396125 0.2917359 0.37714154 prediction 0.405092699782184 Functional Loss - HMBOX1;KIF13B ENSG00000147421 intronic Human protein_coding chr8:28919814 chr8:28919816 . . 0 23 hm5C_associated_SNPs_96670 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:28919791-28919829
64251 chr14 101195375 101195375 1 + C T READ 101195372 + 101195352 101195392 41 CCCGGGCAGTGCATTTGCACCGACGGCTGGGACGGGGAGCT CCCGGGCAGTGCATTTGCACCGATGGCTGGGACGGGGAGCT < 41bp 0.702535268940498 0.487369585871266 0.19193849 0.24638534 prediction 0.405070537880996 Functional Loss - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195372 chr14:101195375 synonymous SNV . 0 24 hm5C_associated_SNPs_96675 0 0 20 DDX3X POSTAR2 ENCODE chr14:101195349-101195397
64251 chr19 49841245 49841245 1 + G T SKCM 49841241 + 49841221 49841261 41 CAAAAGTACGGCACCAACCCCGAGGAGACCGCGGCCGAGGA CAAAAGTACGGCACCAACCCCGAGTAGACCGCGGCCGAGGA < 41bp 0.720169812086629 0.517637539630869 0.8210776 0.41286948 prediction 0.405064544911518 Functional Loss - CD37 ENSG00000104894 CDS Human protein_coding chr19:49841241 chr19:49841245 stopgain 0.111 0 25 hm5C_associated_SNPs_96678 0 0 1 SND1 POSTAR2 ENCODE chr19:49841179-49841255
64251 chr15 42118123 42118123 1 + G C rs3179542 42118122 + 42118102 42118142 41 TCTCACACCAGCTGCACTCCCGTGGCTGCCAGAGCAGGGTG TCTCACACCAGCTGCACTCCCCTGGCTGCCAGAGCAGGGTG < 41bp 0.702529642804919 0.379335806505921 0.67641586 0.12887824 prediction 0.405059285609837 Functional Loss - MAPKBP1 ENSG00000250379 ncRNA_intronic Human antisense chr15:42118122 chr15:42118123 . . 0 22 hm5C_associated_SNPs_96682 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr15:42118104-42118133
64251 chr3 141595606 141595606 1 + C T rs11539490 141595604 + 141595584 141595624 41 GCAGCCCTCGCCGCCTCCATCCCCGCGGCCGCAGCTCCTCT GCAGCCCTCGCCGCCTCCATCCTCGCGGCCGCAGCTCCTCT < 41bp 0.715200988345245 0.512675672428674 0.9205513 0.92731416 prediction 0.405050631833142 Functional Loss - ATP1B3 ENSG00000069849 UTR5 Human protein_coding chr3:141595604 chr3:141595606 . . 0 23 hm5C_associated_SNPs_96685 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:141595480-141595620
64251 chrX 48676711 48676711 1 + G A UCEC 48676708 + 48676688 48676728 41 GGTGCCAGCAGCCAGATCGGCCGGGCTGCGGGCACAGGCTT GGTGCCAGCAGCCAGATCGGCCGAGCTGCGGGCACAGGCTT < 41bp 0.702520334378913 0.4563166605754 0.7194426 0.39513093 prediction 0.405040668757825 Functional Loss - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48676708 chrX:48676711 synonymous SNV . 0 24 hm5C_associated_SNPs_96688 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chrX:48676703-48676719
64251 chr17 46628424 46628424 1 + G A LUSC 46628421 + 46628401 46628441 41 GCTCGTGTACGCCGTCCGCGCCCGCTTGGACGCCGCCGACC GCTCGTGTACGCCGTCCGCGCCCACTTGGACGCCGCCGACC < 41bp 0.702515908102348 0.452653541274664 0.59816015 0.22697687 prediction 0.405031816204695 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628421 chr17:46628424 nonsynonymous SNV 0.994 5 24 hm5C_associated_SNPs_96689 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chr1 64100558 64100558 1 + G A UCEC 64100555 + 64100535 64100575 41 GAACTCGGTGCCCCTGCGAACTCGGCAGTTAACTGCGTTCC GAACTCGGTGCCCCTGCGAACTCAGCAGTTAACTGCGTTCC < 41bp 0.70251297198934 0.460862200427935 0.32960054 0.12501669 prediction 0.40502594397868 Functional Loss - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64100555 chr1:64100558 synonymous SNV . 0 24 hm5C_associated_SNPs_96691 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:64100552-64100593
64251 chr16 29675887 29675887 1 + C T HNSC 29675884 + 29675864 29675904 41 CTCTGCTCCTGCTGTGGCGCCGGCGGCAGAAGCGGCGGACT CTCTGCTCCTGCTGTGGCGCCGGTGGCAGAAGCGGCGGACT < 41bp 0.702511507407124 0.493606858438293 0.8954226 0.76537377 prediction 0.405023014814247 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675884 chr16:29675887 nonsynonymous SNV 0.960 2 24 hm5C_associated_SNPs_96693 0 0 7 RBM15 POSTAR2 ENCODE chr16:29675829-29675893
64251 chr1 220960457 220960457 1 + A C rs79575000 220960456 + 220960436 220960476 41 GCTGCTGCAGCAGGTGGGCACAGTGGCGCAGCTCTGGATCT GCTGCTGCAGCAGGTGGGCACCGTGGCGCAGCTCTGGATCT < 41bp 0.84013442003469 0.637622964765685 0.41420668 0.357546 prediction 0.40502291053801 Functional Loss - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220960456 chr1:220960457 synonymous SNV . 0 22 hm5C_associated_SNPs_96694 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:220960432-220960458
64251 chr19 11024678 11024678 1 + C T UCEC 11024675 + 11024655 11024695 41 CCCATGGGCTACATGCTCTTCAACGAGCGCATGCTGGAGAG CCCATGGGCTACATGCTCTTCAATGAGCGCATGCTGGAGAG < 41bp 0.708531714701864 0.506020756778351 0.20952544 0.31858665 prediction 0.405021915847025 Functional Loss - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024675 chr19:11024678 synonymous SNV . 0 24 hm5C_associated_SNPs_96695 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:11024640-11024678
64251 chr1 74663969 74663969 1 + G T SKCM 74663967 + 74663947 74663987 41 CAGGGAAGGTGGGGCTATGGCAGCTGCTAGGGACCCTCCGG CAGGGAAGGTGGGGCTATGGCATCTGCTAGGGACCCTCCGG < 41bp 0.921616337147681 0.719107702978526 0.8937148 0.51817197 prediction 0.405017268338312 Functional Loss - FPGT;FPGT-TNNI3K ENSG00000116783;ENSG00000254685;ENSG00000259030 CDS Human other chr1:74663967 chr1:74663969 nonsynonymous SNV 0.225 0 23 hm5C_associated_SNPs_96698 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:74663960-74663980
64251 chr22 45914568 45914568 1 + C T UCEC 45914566 + 45914546 45914586 41 TCTCTTCCCTGCACAGTGGACGCGGATGTCCTCCTGGAGGC TCTCTTCCCTGCACAGTGGACGTGGATGTCCTCCTGGAGGC < 41bp 0.848048135527022 0.645540176863084 0.8705594 0.7546954 prediction 0.405015917327877 Functional Loss - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45914566 chr22:45914568 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_96700 0 0 6 DDX3X POSTAR2 ENCODE chr22:45914560-45914587
64251 chr22 29695258 29695258 1 + G T OV 29695256 + 29695236 29695276 41 CCAGAACTTCGCCTGGAGAACAGAGTGCAACCAGTGTAAGG CCAGAACTTCGCCTGGAGAACATAGTGCAACCAGTGTAAGG < 41bp 0.702507059897168 0.343508217367863 0.1852392 0.059940934 prediction 0.405014119794337 Functional Loss - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695256 chr22:29695258 stopgain 1.000 0 23 hm5C_associated_SNPs_96701 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:29695179-29695274
64251 chr12 120741509 120741509 1 + C T UCEC 120741506 + 120741486 120741526 41 CTGAGAAGGTCAAAGAGTTACAGCGCTTCATCACCCTTTCC CTGAGAAGGTCAAAGAGTTACAGTGCTTCATCACCCTTTCC < 41bp 0.715128412678854 0.512622389814318 0.044866085 0.077916056 prediction 0.405012045729072 Functional Loss - SIRT4 ENSG00000089163 CDS Human protein_coding chr12:120741506 chr12:120741509 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_96703 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr12:120741500-120741520
64251 chr8 87414266 87414266 1 + G A UCEC 87414263 + 87414243 87414283 41 TCAAGGTTGGCTGTTGAAGGCACGAATGGAATAGATAATCA TCAAGGTTGGCTGTTGAAGGCACAAATGGAATAGATAATCA < 41bp 0.702504224827364 0.48232521523164 0.09300092 0.06494737 prediction 0.405008449654729 Functional Loss - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87414263 chr8:87414266 synonymous SNV . 0 24 hm5C_associated_SNPs_96705 0 0 1 BUD13 POSTAR2 ENCODE chr8:87414230-87414269
64251 chr19 48248903 48248903 1 + G T LGG 48248899 + 48248879 48248919 41 TTTCCTGGGGCTGCGGCCCACTTCGGTGGACCCAGCGCTGA TTTCCTGGGGCTGCGGCCCACTTCTGTGGACCCAGCGCTGA < 41bp 0.702503777098763 0.489936502119485 0.4342029 0.06852552 prediction 0.405007554197526 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248899 chr19:48248903 synonymous SNV . 0 25 hm5C_associated_SNPs_96706 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:48248861-48248918
64251 chr19 10742309 10742309 1 + G A SKCM 10742306 + 10742286 10742326 41 CCTCTGCTCCATGCAGTGGCCCGGAGATGCTTCCCCGCTAT CCTCTGCTCCATGCAGTGGCCCGAAGATGCTTCCCCGCTAT < 41bp 0.826495378259633 0.623993102065546 0.8946955 0.22148544 prediction 0.405004552388175 Functional Loss - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10742306 chr19:10742309 synonymous SNV . 0 24 hm5C_associated_SNPs_96708 0 0 1 DDX24 POSTAR2 ENCODE chr19:10742303-10742359
64251 chrX 48457103 48457103 1 + A T COAD 48457099 + 48457079 48457119 41 GCCTGCCCTGCATCCTGACCCTGCAGGTACAACGCGTACCG GCCTGCCCTGCATCCTGACCCTGCTGGTACAACGCGTACCG < 41bp 0.702494483464118 0.444152728803679 0.11906353 0.079542935 prediction 0.404988966928237 Functional Loss - WDR13 ENSG00000101940 splicing Human protein_coding chrX:48457099 chrX:48457103 . 0.973 0 25 hm5C_associated_SNPs_96715 0 0 7 PRPF8 POSTAR2 ENCODE chrX:48457054-48457107
64251 chr2 203149168 203149168 1 + G A COAD 203149165 + 203149145 203149185 41 ATTAATCCCTGGGGTAGAACCACGTGAAATGGCAGCTATGT ATTAATCCCTGGGGTAGAACCACATGAAATGGCAGCTATGT < 41bp 0.799420400431723 0.596926581904563 0.89386296 0.37881026 prediction 0.404987637054321 Functional Loss - NOP58 ENSG00000055044 CDS Human protein_coding chr2:203149165 chr2:203149168 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_96716 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:203149063-203149229
64251 chr19 54627968 54627968 1 + C T SKCM 54627966 + 54627946 54627986 41 CGCAAGACGCTGTCGGGCTTCTCGTCTACCTCAGTGCTGCC CGCAAGACGCTGTCGGGCTTCTTGTCTACCTCAGTGCTGCC < 41bp 0.702491455565532 0.408408452153114 0.20016545 0.05751607 prediction 0.404982911131064 Functional Loss - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54627966 chr19:54627968 nonsynonymous SNV 0.150 4 23 hm5C_associated_SNPs_96718 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:54627949-54627984
64251 chr19 740362 740362 1 + G A COAD 740359 + 740339 740379 41 ACTCTCGTGCCAGCCATGTACTCGGTTGAGATCACTGTGGA ACTCTCGTGCCAGCCATGTACTCAGTTGAGATCACTGTGGA < 41bp 0.806838397648663 0.604353421380242 0.54831845 0.41812307 prediction 0.404969952536841 Functional Loss - PALM ENSG00000099864 CDS Human protein_coding chr19:740359 chr19:740362 synonymous SNV . 0 24 hm5C_associated_SNPs_96722 0 0 1 DDX55 POSTAR2 ENCODE chr19:740361-740414
64251 chr15 85360149 85360149 1 + G T HNSC 85360145 + 85360125 85360165 41 GAGGCAAGGCGAGGGTCAGTCACGGCTGGTGCCAGGAAGAG GAGGCAAGGCGAGGGTCAGTCACGTCTGGTGCCAGGAAGAG < 41bp 0.754490105478086 0.552013875534627 0.35571867 0.26778173 prediction 0.404952459886918 Functional Loss - ALPK3 ENSG00000136383 CDS Human protein_coding chr15:85360145 chr15:85360149 synonymous SNV . 0 25 hm5C_associated_SNPs_96733 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr15:85360145-85360160
64251 chr1 91980413 91980413 1 + G A BLCA 91980410 + 91980390 91980430 41 AAAGACTGTGGATGTACTGTCTAGAAAGTTAGCAACAAAAA AAAGACTGTGGATGTACTGTCTAAAAAGTTAGCAACAAAAA < 41bp 0.702473542138319 0.485062384684935 0.067028075 0.013835937 prediction 0.404947084276639 Functional Loss - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91980410 chr1:91980413 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_96735 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:91980378-91980418
64251 chr12 6618926 6618926 1 + G T LUSC 6618924 + 6618904 6618944 41 CTCAGGGGCCCCTGGCTATGCTGCAGCACTTTGATACTATC CTCAGGGGCCCCTGGCTATGCTTCAGCACTTTGATACTATC < 41bp 0.702472028197436 0.355033377645012 0.08964571 0.034760892 prediction 0.404944056394873 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6618924 chr12:6618926 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_96736 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:6618923-6618949
64251 chr5 140627104 140627104 1 + C T HNSC 140627102 + 140627082 140627122 41 GACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCA GACAATGGCGAGCCTCCGCGCTTGGCCACCGCCACGCTGCA < 41bp 0.702467874429348 0.457170432516395 0.15525973 0.13826987 prediction 0.404935748858697 Functional Loss - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140627102 chr5:140627104 nonsynonymous SNV 0.028 3 23 hm5C_associated_SNPs_96738 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140627101-140627158
64251 chr9 4662753 4662753 1 + G C THCA 4662752 + 4662732 4662772 41 GTGCGCGGGAGAGAGCTCGTCGTGGGGCAGCGTGCGACCCC GTGCGCGGGAGAGAGCTCGTCCTGGGGCAGCGTGCGACCCC < 41bp 0.904117057030166 0.701658565311494 0.88599294 0.43656313 prediction 0.404916983437344 Functional Loss - PLPP6 ENSG00000205808 CDS Human protein_coding chr9:4662752 chr9:4662753 synonymous SNV . 0 22 hm5C_associated_SNPs_96748 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:4662732-4662761
64251 chr20 3028472 3028472 1 + C T UCEC 3028470 + 3028450 3028490 41 AAGAACTACAACTGGGCCATCACCAGAGAGGGGCTGGTGGT AAGAACTACAACTGGGCCATCATCAGAGAGGGGCTGGTGGT < 41bp 0.856772752653692 0.654314761432836 0.5174966 0.4255442 prediction 0.404915982441712 Functional Loss - MRPS26 ENSG00000125901 CDS Human protein_coding chr20:3028470 chr20:3028472 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_96749 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:3028435-3028476
64251 chr1 213414331 213414331 1 + A C HNSC 213414330 + 213414310 213414350 41 GCCAGATTCTGGTTCAAGTTCAGAAGAAGAATGTACTACTA GCCAGATTCTGGTTCAAGTTCCGAAGAAGAATGTACTACTA < 41bp 0.702454837063666 0.450763335262608 0.56398845 0.37819958 prediction 0.404909674127332 Functional Loss - RPS6KC1 ENSG00000136643 CDS Human protein_coding chr1:213414330 chr1:213414331 synonymous SNV . 0 22 hm5C_associated_SNPs_96751 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:213414328-213414352
64251 chr2 26950590 26950590 1 + C T UCEC 26950587 + 26950567 26950607 41 GGCAAGGTGTTCTGCATGTTCTACGCGCTGCTGGGCATCCC GGCAAGGTGTTCTGCATGTTCTATGCGCTGCTGGGCATCCC < 41bp 0.704121218926722 0.501670910009164 0.16323572 0.1896613 prediction 0.404900617835116 Functional Loss - KCNK3 ENSG00000171303 CDS Human protein_coding chr2:26950587 chr2:26950590 synonymous SNV . 0 24 hm5C_associated_SNPs_96754 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:26950582-26950615
64251 chr2 47222329 47222329 1 + C T LUSC 47222326 + 47222306 47222346 41 GCCCTCCTGCTCCTCCTCATCAGCGAATCCATGGTAAGCTC GCCCTCCTGCTCCTCCTCATCAGTGAATCCATGGTAAGCTC < 41bp 0.742956226472698 0.54050610983628 0.79932 0.4203151 prediction 0.404900233272836 Functional Loss - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47222326 chr2:47222329 synonymous SNV . 0 24 hm5C_associated_SNPs_96755 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:47222316-47222337
64251 chr19 35531096 35531096 1 + G A rs72550268 35531093 + 35531073 35531113 41 GCCTCCTCCCTGCCTGGCGGCAGGGGTCGCGATGATGGGCT GCCTCCTCCCTGCCTGGCGGCAGAGGTCGCGATGATGGGCT < 41bp 0.779247885963946 0.576798584678867 0.8742069 0.7801736 prediction 0.404898602570158 Functional Loss - SCN1B ENSG00000105711 UTR3 Human protein_coding chr19:35531093 chr19:35531096 . . 0 24 hm5C_associated_SNPs_96756 0 0 1 RBFOX2 POSTAR2 ENCODE chr19:35530939-35531105
64251 chr16 677988 677988 1 + C T rs111467675 677986 + 677966 678006 41 TCAGGGAAGCCTGGGTGTGGCCCGGTGGTGGTGCACTGGTG TCAGGGAAGCCTGGGTGTGGCCTGGTGGTGGTGCACTGGTG < 41bp 0.702445563172809 0.470941541904246 0.69048935 0.5802415 prediction 0.404891126345617 Functional Loss - RAB40C ENSG00000197562 UTR3 Human protein_coding chr16:677986 chr16:677988 . . 0 23 hm5C_associated_SNPs_96759 0 0 9 EIF3D POSTAR2 GSE65004,GSM1585671 chr16:677974-678003
64251 chr11 57564286 57564286 1 + C T COAD 57564283 + 57564263 57564303 41 GTAGACAGGATGTGTATGGGCCCCAACCCCAGGTTCGGGTA GTAGACAGGATGTGTATGGGCCCTAACCCCAGGTTCGGGTA < 41bp 0.702438600936897 0.478091816200762 0.08174503 0.21602401 prediction 0.404877201873794 Functional Loss - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57564283 chr11:57564286 stopgain 0.997 1 24 hm5C_associated_SNPs_96765 0 0 17 FMR1 POSTAR2 GSE39682,GSM977616 chr11:57564280-57564300
64251 chr12 7048043 7048043 1 + C T LUSC 7048041 + 7048021 7048061 41 GCCGGGCTTGGATCCCTTTCCCCGACATGGGGGCCTGGCTC GCCGGGCTTGGATCCCTTTCCCTGACATGGGGGCCTGGCTC < 41bp 0.862368726235426 0.659930836633683 0.21650416 0.23501283 prediction 0.404875779203486 Functional Loss - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7048041 chr12:7048043 stopgain 0.995 0 23 hm5C_associated_SNPs_96767 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7048007-7048045
64251 chr17 1945113 1945113 1 + A T LUSC 1945109 + 1945089 1945129 41 TCGGCCGTGGCTTGCGAGGACTGCAGCTGCAGGGACGAGAA TCGGCCGTGGCTTGCGAGGACTGCTGCTGCAGGGACGAGAA < 41bp 0.810640103814022 0.608204190333286 0.50378436 0.37210616 prediction 0.404871826961473 Functional Loss - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1945109 chr17:1945113 nonsynonymous SNV 0.123 1 25 hm5C_associated_SNPs_96769 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:1945100-1945120
64251 chr13 96443194 96443194 1 + C T PRAD 96443191 + 96443171 96443211 41 GAGAGCCAGCAAGGAGGCGGCGGCAACCCTTTCCACAGAAG GAGAGCCAGCAAGGAGGCGGCGGTAACCCTTTCCACAGAAG < 41bp 0.724809521040568 0.522375605456678 0.61851937 0.43176782 prediction 0.404867831167779 Functional Loss - DNAJC3 ENSG00000102580 CDS Human protein_coding chr13:96443191 chr13:96443194 synonymous SNV . 0 24 hm5C_associated_SNPs_96772 0 0 3 SND1 POSTAR2 ENCODE chr13:96443137-96443225
64251 chr1 36558897 36558897 1 + G T OV 36558895 + 36558875 36558915 41 GTGCCTACTATGGGATGGATCAGGTGCCAGAGAGCTGGCAG GTGCCTACTATGGGATGGATCATGTGCCAGAGAGCTGGCAG < 41bp 0.913127486223261 0.710708333799176 0.9174768 0.18073207 prediction 0.40483830484817 Functional Loss - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36558895 chr1:36558897 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_96782 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36558890-36558902
64251 chr1 228362564 228362564 1 + G A SKCM 228362561 + 228362541 228362581 41 CCCAGTTCCCCTGAGGCCTGCGGGGCTGCATCGCTGCAGGA CCCAGTTCCCCTGAGGCCTGCGGAGCTGCATCGCTGCAGGA < 41bp 0.83776807370311 0.635352819181363 0.9008209 0.5159675 prediction 0.404830509043493 Functional Loss - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362561 chr1:228362564 synonymous SNV . 0 24 hm5C_associated_SNPs_96786 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:228362553-228362582
64251 chr18 13763410 13763410 1 + C T rs189198164 13763408 + 13763388 13763428 41 ACTCCTTAGTGCCTGCACCTCACCACGATATTGAGGAAGCA ACTCCTTAGTGCCTGCACCTCATCACGATATTGAGGAAGCA < 41bp 0.769309521744252 0.566896352122578 0.018952698 0.03238365 prediction 0.404826339243348 Functional Loss - RNMT ENSG00000101654 UTR3 Human protein_coding chr18:13763408 chr18:13763410 . . 0 23 hm5C_associated_SNPs_96788 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr18:13763380-13763410
64251 chr2 242757847 242757847 1 + G T LUSC 242757844 + 242757824 242757864 41 GTCCCCTCCAGCCTCCACTCCTCGGTCCTGGAGTCCACGAA GTCCCCTCCAGCCTCCACTCCTCTGTCCTGGAGTCCACGAA < 41bp 0.702412382288529 0.297866931128757 0.28146297 0.049073666 prediction 0.404824764577058 Functional Loss - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242757844 chr2:242757847 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_96789 0 0 2 DDX55 POSTAR2 ENCODE chr2:242757811-242757856
64251 chr15 63883009 63883009 1 + G A LUSC 63883006 + 63882986 63883026 41 CGTGGAACACCAGGCCAAAGCTGGATCGGATAAACTTTAAT CGTGGAACACCAGGCCAAAGCTGAATCGGATAAACTTTAAT < 41bp 0.769570970671839 0.567161772188907 0.33113486 0.24498391 prediction 0.404818396965864 Functional Loss - USP3 ENSG00000140455 CDS Human protein_coding chr15:63883006 chr15:63883009 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_96791 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:63883000-63883020
64251 chr17 7467091 7467091 1 + C T SKCM 7467088 + 7467068 7467108 41 ACTCAGGTGGACTCCAAAGTCTCCTCTGGACCCTGACTCGG ACTCAGGTGGACTCCAAAGTCTCTTCTGGACCCTGACTCGG < 41bp 0.719441427631842 0.517033701664833 0.15659165 0.21717197 prediction 0.404815451934017 Functional Loss - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7467088 chr17:7467091 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96793 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7467054-7467092
64251 chr9 71687547 71687547 1 + T C UCEC 71687546 + 71687526 71687566 41 AGTGGACCTAAGCGTTATGACTGGACTGGGAAAAACTGGGT AGTGGACCTAAGCGTTATGACCGGACTGGGAAAAACTGGGT < 41bp 0.813057444090268 0.610650629604354 0.095193595 0.11891127 prediction 0.404813628971828 Functional Loss - FXN ENSG00000165060 CDS Human protein_coding chr9:71687546 chr9:71687547 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_96794 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:71687530-71687556
64251 chr3 50683670 50683670 1 + T C STAD 50683669 + 50683649 50683689 41 CCAGTACGGCTTCCCCAATCCTGAGTGGTCAGAAGTCTCTG CCAGTACGGCTTCCCCAATCCCGAGTGGTCAGAAGTCTCTG < 41bp 0.702404663617946 0.441830262392967 0.08248368 0.04921502 prediction 0.404809327235891 Functional Loss - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683669 chr3:50683670 synonymous SNV . 0 22 hm5C_associated_SNPs_96798 0 0 1 PPIG POSTAR2 ENCODE chr3:50683633-50683712
64251 chr19 39907024 39907024 1 + C T LUAD 39907021 + 39907001 39907041 41 GACTTGGAGAACAGCAGCAGCGCCGGGGGTATTGCCGAGTG GACTTGGAGAACAGCAGCAGCGCTGGGGGTATTGCCGAGTG < 41bp 0.765053463584501 0.562650712076606 0.51234835 0.42516273 prediction 0.40480550301579 Functional Loss - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39907021 chr19:39907024 synonymous SNV . 0 24 hm5C_associated_SNPs_96802 0 0 2 PPIG POSTAR2 ENCODE chr19:39906986-39907054
64251 chr18 3451805 3451805 1 + A T rs61331871 3451801 + 3451781 3451821 41 GCCCTAAGGACCCCTCCCCGCGGGACGGAGGGAGGACTCGG GCCCTAAGGACCCCTCCCCGCGGGTCGGAGGGAGGACTCGG < 41bp 0.856878121074412 0.654476655248519 0.84558547 0.800491 prediction 0.404802931651788 Functional Loss - TGIF1 ENSG00000177426 UTR5 Human protein_coding chr18:3451801 chr18:3451805 . . 0 25 hm5C_associated_SNPs_96804 0 0 14 CSTF2T POSTAR2 ENCODE chr18:3451784-3451886
64251 chr7 7612109 7612109 1 + G T LUSC 7612106 + 7612086 7612126 41 CCTTTGATCACATCAGTAAACATGAGCGGTACCAAACCTGA CCTTTGATCACATCAGTAAACATTAGCGGTACCAAACCTGA < 41bp 0.702396723329013 0.454440361133433 0.23771486 0.0468328 prediction 0.404793446658025 Functional Loss - MIOS ENSG00000164654 CDS Human protein_coding chr7:7612106 chr7:7612109 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_96806 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:7612064-7612118
64251 chr1 150484939 150484939 1 + C T BLCA 150484936 + 150484916 150484956 41 CTCGGGATGAGTGCTTTGCCCGTCGGGCTCCTTACCCCAAC CTCGGGATGAGTGCTTTGCCCGTTGGGCTCCTTACCCCAAC < 41bp 0.702395006047146 0.482341654292737 0.14291272 0.08496785 prediction 0.404790012094292 Functional Loss - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484936 chr1:150484939 nonsynonymous SNV 0.024 1 24 hm5C_associated_SNPs_96808 0 0 2 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr11 118403005 118403005 1 + C T STAD 118403002 + 118402982 118403022 41 TGGCCTGGTATCTGGATGGACAGCTGCAGGAGGCCAGCACC TGGCCTGGTATCTGGATGGACAGTTGCAGGAGGCCAGCACC < 41bp 0.702393149528378 0.497995862381911 0.8649112 0.35061717 prediction 0.404786299056755 Functional Loss - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118403002 chr11:118403005 synonymous SNV . 0 24 hm5C_associated_SNPs_96810 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:118402991-118403027
64251 chr7 128483527 128483527 1 + G A UCEC 128483524 + 128483504 128483544 41 AGGGAGCCGGCAAGGCCAAGCTGGATGTGCAGTTTGCAGGG AGGGAGCCGGCAAGGCCAAGCTGAATGTGCAGTTTGCAGGG < 41bp 0.819769568188594 0.617381077889103 0.74246824 0.7283983 prediction 0.404776980598983 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128483524 chr7:128483527 nonsynonymous SNV 0.988 2 24 hm5C_associated_SNPs_96812 0 0 1 UCHL5 POSTAR2 ENCODE chr7:128483520-128483579
64251 chr5 78533314 78533314 1 + G A BLCA 78533311 + 78533291 78533331 41 GCGCCCCCGAGATGACCGAGCAGGAAATCGACACTCTGTGT GCGCCCCCGAGATGACCGAGCAGAAAATCGACACTCTGTGT < 41bp 0.814512114429108 0.612126504149953 0.9311335 0.9181293 prediction 0.404771220558309 Functional Loss - JMY ENSG00000152409 CDS Human protein_coding chr5:78533311 chr5:78533314 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96814 0 0 2 FXR2 POSTAR2 ENCODE chr5:78533280-78533315
64251 chr20 61303271 61303271 1 + G A rs184104479 61303268 + 61303248 61303288 41 ACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAGCATTT ACCGCCCGCGCCCACCCGGCCACAGCGGGCACTCAGCATTT < 41bp 0.811195842158555 0.608812776563482 0.51297927 0.21378136 prediction 0.404766131190145 Functional Loss - SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303268 chr20:61303271 . . 0 24 hm5C_associated_SNPs_96816 0 0 1 SRSF7 POSTAR2 ENCODE chr20:61303236-61303284
64251 chr5 96271832 96271832 1 + G C rs543713716 96271831 + 96271811 96271851 41 AGTAGGAAGCTCGGGCGCTCCGGCTGTAAGGAGCCGCGGCG AGTAGGAAGCTCGGGCGCTCCCGCTGTAAGGAGCCGCGGCG < 41bp 0.763659936721151 0.561277701171606 0.8709513 0.72527564 prediction 0.40476447109909 Functional Loss - LNPEP ENSG00000113441 UTR5 Human protein_coding chr5:96271831 chr5:96271832 . . 0 22 hm5C_associated_SNPs_96817 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:96271800-96271840
64251 chr6 311892 311892 1 + C T COAD 311890 + 311870 311910 41 TCTCTGACAGATGCCAGAGACGCGGAACAATTGAGCAAGAA TCTCTGACAGATGCCAGAGACGTGGAACAATTGAGCAAGAA < 41bp 0.70237206157423 0.445327348231073 0.50513697 0.5639706 prediction 0.40474412314846 Functional Loss - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:311890 chr6:311892 nonsynonymous SNV 0.652 0 23 hm5C_associated_SNPs_96823 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:311877-311911
64251 chr8 55060245 55060245 1 + C T UCEC 55060242 + 55060222 55060262 41 CGATAAGAAAATCCTAAAACCTACAGATGAAAATCTCCTTA CGATAAGAAAATCCTAAAACCTATAGATGAAAATCTCCTTA < 41bp 0.773182420586159 0.570811222884159 0.30062187 0.10017401 prediction 0.404742395404001 Functional Loss - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060242 chr8:55060245 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_96825 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:55060235-55060406
64251 chr8 74207595 74207595 1 + G A TGCT 74207592 + 74207572 74207612 41 GGCGTTCGTGCTGGCCGCGGCGCGCTGGCTGGTGCGGCCCA GGCGTTCGTGCTGGCCGCGGCGCACTGGCTGGTGCGGCCCA < 41bp 0.702363110935059 0.445294954460811 0.5069342 0.4166327 prediction 0.404726221870118 Functional Loss - RDH10 ENSG00000121039 CDS Human protein_coding chr8:74207592 chr8:74207595 nonsynonymous SNV 0.843 2 24 hm5C_associated_SNPs_96830 0 0 2 DDX3X POSTAR2 ENCODE chr8:74207563-74207629
64251 chrX 119387346 119387346 1 + C T KIRP 119387343 + 119387323 119387363 41 TGCTGAACTCCTTGAATGAGCAACGTGGCCATGGACTCTTC TGCTGAACTCCTTGAATGAGCAATGTGGCCATGGACTCTTC < 41bp 0.713621291806275 0.511259632638297 0.1256442 0.09947398 prediction 0.404723318335954 Functional Loss - ZBTB33 ENSG00000177485 CDS Human protein_coding chrX:119387343 chrX:119387346 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_96831 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:119387303-119387360
64251 chr1 45115605 45115605 1 + C T STAD 45115602 + 45115582 45115622 41 ATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCG ATCCAGTGTTGGCACGTGCACTGTGAGGAGTGCTGGCTGCG < 41bp 0.773322648614301 0.570963764223721 0.15504098 0.06798452 prediction 0.40471776878116 Functional Loss - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45115602 chr1:45115605 synonymous SNV . 0 24 hm5C_associated_SNPs_96834 0 0 5 DDX24 POSTAR2 ENCODE chr1:45115554-45115628
64251 chrX 149114046 149114046 1 + C T rs189837604 149114044 + 149114024 149114064 41 GCATGCTGATCCTGCAGCTCCTCGAGGGTGTCATCGCTTTC GCATGCTGATCCTGCAGCTCCTTGAGGGTGTCATCGCTTTC < 41bp 0.702355015176631 0.440624320435836 0.3587436 0.24023041 prediction 0.404710030353262 Functional Loss - LINC00894 ENSG00000235703 ncRNA_exonic Human antisense chrX:149114044 chrX:149114046 . . 0 23 hm5C_associated_SNPs_96837 0 0 1 RBFOX2 POSTAR2 ENCODE chrX:149113972-149114046
64251 chr1 248028109 248028109 1 + G T LUAD 248028107 + 248028087 248028127 41 GCAGCTGAGGCGGCTGGAGGCGGAGGAGCGAGCGACGCTGC GCAGCTGAGGCGGCTGGAGGCGTAGGAGCGAGCGACGCTGC < 41bp 0.929950434475639 0.727600256574589 0.90659976 0.89574134 prediction 0.4047003558021 Functional Loss - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248028107 chr1:248028109 stopgain 0.280 1 23 hm5C_associated_SNPs_96842 0 0 4 UCHL5 POSTAR2 ENCODE chr1:248028101-248028186
64251 chr11 63994365 63994365 1 + C T rs201149562 63994362 + 63994342 63994382 41 CTCGGGGGCCACAGCTGCTCCTGCGCCTGGGCCTTACTTCC CTCGGGGGCCACAGCTGCTCCTGTGCCTGGGCCTTACTTCC < 41bp 0.758920835593721 0.556571310568491 0.49303496 0.5221408 prediction 0.404699050050461 Functional Loss - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994362 chr11:63994365 nonsynonymous SNV 0.439 2 24 hm5C_associated_SNPs_96844 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr11 63988121 63988121 1 + C T KICH 63988118 + 63988098 63988138 41 GCCTCGTTGCCCCCCGTTTCCAGCGAAAGTTCAAGGCCAAG GCCTCGTTGCCCCCCGTTTCCAGTGAAAGTTCAAGGCCAAG < 41bp 0.702548072606403 0.500198738438177 0.8378997 0.3652974 prediction 0.404698668336452 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63988118 chr11:63988121 stopgain 0.997 1 24 hm5C_associated_SNPs_96845 1 0 1 RPS3 POSTAR2 ENCODE chr11:63988086-63988122
64251 chr7 72413660 72413660 1 + C T OV 72413658 + 72413638 72413678 41 TCGGCGTTTGGGTTGAAAGCCACGGCTTCGGCCTTCGGCGC TCGGCGTTTGGGTTGAAAGCCATGGCTTCGGCCTTCGGCGC < 41bp 0.822150255116391 0.619801230891675 0.67361116 0.6922571 prediction 0.404698048449431 Functional Loss - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413658 chr7:72413660 nonsynonymous SNV 0.006 2 23 hm5C_associated_SNPs_96846 0 0 1 RBM15 POSTAR2 ENCODE chr7:72413649-72413748
64251 chr1 168148318 168148318 1 + G T LIHC 168148315 + 168148295 168148335 41 TCTGCGGGTCCTGCCTCAGCCATGATGATCCACGGCTTCCA TCTGCGGGTCCTGCCTCAGCCATTATGATCCACGGCTTCCA < 41bp 0.81391122629708 0.61156458714479 0.09368184 0.028573036 prediction 0.404693278304579 Functional Loss - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168148315 chr1:168148318 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_96848 0 0 15 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:168148293-168148318
64251 chr7 6193579 6193579 1 + C T STAD 6193577 + 6193557 6193597 41 GGGAGGCCATGGCCGTCGCCCCCGAGGAGCCTCCGCCCAGC GGGAGGCCATGGCCGTCGCCCCTGAGGAGCCTCCGCCCAGC < 41bp 0.851130099332529 0.648786902992064 0.20252159 0.2869761 prediction 0.404686392680931 Functional Loss - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193577 chr7:6193579 synonymous SNV . 0 23 hm5C_associated_SNPs_96852 0 0 1 FXR2 POSTAR2 ENCODE chr7:6193547-6193618
64251 chr10 92631801 92631801 1 + G A LGG 92631798 + 92631778 92631818 41 GTTCTGACCTGAAGGCTCTGCGCGGACTTGTGGAGACAGCC GTTCTGACCTGAAGGCTCTGCGCAGACTTGTGGAGACAGCC < 41bp 0.7023351390155 0.471325764609269 0.29282147 0.09696525 prediction 0.404670278031 Functional Loss - RPP30 ENSG00000148688 CDS Human protein_coding chr10:92631798 chr10:92631801 nonsynonymous SNV 0.174 0 24 hm5C_associated_SNPs_96859 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:92631779-92631810
64251 chr22 50633419 50633419 1 + C T COAD 50633416 + 50633396 50633436 41 AGATGGACGAGAGCACGCTGCTGCGGGAGGCCCAGGAGCTC AGATGGACGAGAGCACGCTGCTGTGGGAGGCCCAGGAGCTC < 41bp 0.739782767278144 0.537448676912476 0.21992323 0.17094699 prediction 0.404668180731335 Functional Loss - TRABD ENSG00000170638 CDS Human protein_coding chr22:50633416 chr22:50633419 nonsynonymous SNV 0.956 2 24 hm5C_associated_SNPs_96862 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:50633392-50633432
64251 chr19 37427735 37427735 1 + G A LUSC 37427732 + 37427712 37427752 41 CTGCTCAAAGAAACTTGTATCGAGATGTGATGCTGGAGAAC CTGCTCAAAGAAACTTGTATCGAAATGTGATGCTGGAGAAC < 41bp 0.80438959775338 0.602055782278511 0.93144023 0.90592456 prediction 0.404667630949738 Functional Loss - ZNF568 ENSG00000198453 CDS Human protein_coding chr19:37427732 chr19:37427735 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_96863 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:37427720-37427740
64251 chr14 24649071 24649071 1 + G T UCEC 24649069 + 24649049 24649089 41 AGCAGCCTGGTGTCACCTCTCAGCCCCCGCAGGATGGCTGC AGCAGCCTGGTGTCACCTCTCATCCCCCGCAGGATGGCTGC < 41bp 0.702329871183025 0.336164563005335 0.84206265 0.0983561 prediction 0.40465974236605 Functional Loss - REC8 ENSG00000100918 CDS Human protein_coding chr14:24649069 chr14:24649071 nonsynonymous SNV 0.945 0 23 hm5C_associated_SNPs_96867 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24649069-24649120
64251 chr11 111953659 111953659 1 + C T LIHC 111953656 + 111953636 111953676 41 ACGCACAAATTGGAAAGTAGCTACAGATGAAAGGTCTGCTG ACGCACAAATTGGAAAGTAGCTATAGATGAAAGGTCTGCTG < 41bp 0.782645587222384 0.58031609980047 0.8752621 0.6634798 prediction 0.404658974843827 Functional Loss - C11orf57 ENSG00000150776 CDS Human protein_coding chr11:111953656 chr11:111953659 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_96868 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:111953606-111953695
64251 chr6 111408985 111408985 1 + C T rs548146319 111408982 + 111408962 111409002 41 CTCTCCCAGGAGGAGCCGGACTCCGCGCGGGGCACGAGCGA CTCTCCCAGGAGGAGCCGGACTCTGCGCGGGGCACGAGCGA < 41bp 0.716087857321397 0.513759349964872 0.9164425 0.79632914 prediction 0.40465701471305 Functional Loss - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111408982 chr6:111408985 synonymous SNV . 0 24 hm5C_associated_SNPs_96871 0 0 1 RPS3 POSTAR2 ENCODE chr6:111408945-111409020
64251 chr17 46939646 46939646 1 + G T UCEC 46939643 + 46939623 46939663 41 TTTTATTCTTTTCAGGTATCCAAGAAAGTTCTTCCCCCAGC TTTTATTCTTTTCAGGTATCCAATAAAGTTCTTCCCCCAGC < 41bp 0.702321259865404 0.318439017226983 0.8297806 0.16628927 prediction 0.404642519730808 Functional Loss - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46939643 chr17:46939646 stopgain 0.926 1 24 hm5C_associated_SNPs_96872 0 0 1 BUD13 POSTAR2 ENCODE chr17:46939641-46939668
64251 chr1 154226413 154226413 1 + G A UCEC 154226410 + 154226390 154226430 41 CAATTTCATCTAACCAGAGTCAGGAGTCTGGTTATCAGAGC CAATTTCATCTAACCAGAGTCAGAAGTCTGGTTATCAGAGC < 41bp 0.793294961408686 0.590975018362302 0.70341474 0.28173906 prediction 0.404639886092769 Functional Loss - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154226410 chr1:154226413 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_96873 0 0 14 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:154226380-154226420
64251 chr2 162751258 162751258 1 + G A LUSC 162751255 + 162751235 162751275 41 TATCAGGAATTGATGAGTTTCTGGATCAGGTTACTGTTCTC TATCAGGAATTGATGAGTTTCTGAATCAGGTTACTGTTCTC < 41bp 0.77833515766546 0.576021303064805 0.3878834 0.15793073 prediction 0.404627709201311 Functional Loss - SLC4A10 ENSG00000144290 CDS Human protein_coding chr2:162751255 chr2:162751258 stopgain 1.000 4 24 hm5C_associated_SNPs_96878 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr2:162751240-162751260
64251 chr19 33602757 33602757 1 + C T rs10420258 33602755 + 33602735 33602775 41 CCTTGTCCTCCAGGTTCACTCACGCCAAGGAGGAGGATGAC CCTTGTCCTCCAGGTTCACTCATGCCAAGGAGGAGGATGAC < 41bp 0.702311731325363 0.416127352196035 0.30853975 0.23321572 prediction 0.404623462650726 Functional Loss - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33602755 chr19:33602757 synonymous SNV . 0 23 hm5C_associated_SNPs_96881 0 0 1 ZNF622 POSTAR2 ENCODE chr19:33602755-33602809
64251 chr16 2552218 2552218 1 + G A rs545082961 2552215 + 2552195 2552235 41 TGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCTG TGGCCAGACGCAGGTAGGTGCCAAGGGAGGCCTTGCCTCTG < 41bp 0.702310943109494 0.443944934520283 0.91573495 0.71157306 prediction 0.404621886218988 Functional Loss - TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2552215 chr16:2552218 . . 0 24 hm5C_associated_SNPs_96882 1 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr16:2552205-2552238
64251 chr6 161530849 161530849 1 + G T LUAD 161530847 + 161530827 161530867 41 CTTTAGAAGAGGTGTCAAGGCTGGGACTTCAGGAACATGTG CTTTAGAAGAGGTGTCAAGGCTTGGACTTCAGGAACATGTG < 41bp 0.702309879621551 0.360341652157084 0.4301843 0.14051363 prediction 0.404619759243101 Functional Loss - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161530847 chr6:161530849 synonymous SNV . 0 23 hm5C_associated_SNPs_96885 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:161530820-161530856
64251 chr12 58139636 58139636 1 + C T SKCM 58139633 + 58139613 58139653 41 TTGCTGTGGGAGTCTTCCTTCTCCTTATTGCAGTGGCTGGA TTGCTGTGGGAGTCTTCCTTCTCTTTATTGCAGTGGCTGGA < 41bp 0.702308944165546 0.474547500860434 0.33846813 0.24644265 prediction 0.404617888331093 Functional Loss - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58139633 chr12:58139636 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_96886 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr12:58139620-58139640
64251 chr19 41097239 41097239 1 + G A rs149963122 41097236 + 41097216 41097256 41 GGAATAAATGGTTATTGTTACTAGGTCCCCACCTTCCCTCT GGAATAAATGGTTATTGTTACTAAGTCCCCACCTTCCCTCT < 41bp 0.796930088365539 0.594624179360137 0.45034805 0.2757606 prediction 0.404611818010804 Functional Loss - SHKBP1 ENSG00000160410 UTR3 Human protein_coding chr19:41097236 chr19:41097239 . . 0 24 hm5C_associated_SNPs_96891 0 0 15 PTBP1 POSTAR2 GSE42701,GSM1048186 chr19:41097220-41097240
64251 chr4 1305894 1305894 1 + C T SKCM 1305892 + 1305872 1305912 41 AGCGGCTGCCCCGCCGTGGACTCCGTGGTCAGCCTGCTGGA AGCGGCTGCCCCGCCGTGGACTTCGTGGTCAGCCTGCTGGA < 41bp 0.870611830726191 0.66830656796634 0.38543546 0.35918027 prediction 0.404610525519703 Functional Loss - MAEA ENSG00000090316 CDS Human protein_coding chr4:1305892 chr4:1305894 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_96892 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:1305879-1305896
64251 chr9 139701235 139701235 1 + C T HNSC 139701233 + 139701213 139701253 41 AAGTGGTGCTCTCCAACACCCTCGATTTGAACAGCAAGCTG AAGTGGTGCTCTCCAACACCCTTGATTTGAACAGCAAGCTG < 41bp 0.868970778647999 0.666668010403095 0.78309655 0.07256132 prediction 0.404605536489809 Functional Loss - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139701233 chr9:139701235 synonymous SNV . 0 23 hm5C_associated_SNPs_96894 0 0 2 HNRNPC POSTAR2 SRX1438577 chr9:139701220-139701240
64251 chr8 22477436 22477436 1 + G A rs181551046 22477433 + 22477413 22477453 41 ATACAACATCTTTTGCACCCCTAGAATGTCATTTTGCCCTC ATACAACATCTTTTGCACCCCTAAAATGTCATTTTGCCCTC < 41bp 0.702302387817907 0.477278419769025 0.25385174 0.51876855 prediction 0.404604775635814 Functional Loss - CCAR2 ENSG00000158941 UTR3 Human protein_coding chr8:22477433 chr8:22477436 . . 0 24 hm5C_associated_SNPs_96896 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:22477416-22477441
64251 chr19 14815924 14815924 1 + C T LIHC 14815921 + 14815901 14815941 41 CTCCATAGAAGAGAGGGAGACACCATTGACTCGAGAGGACC CTCCATAGAAGAGAGGGAGACACTATTGACTCGAGAGGACC < 41bp 0.770992856341368 0.568692250130972 0.4173667 0.25759354 prediction 0.404601212420792 Functional Loss - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14815921 chr19:14815924 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_96897 0 0 3 BUD13 POSTAR2 ENCODE chr19:14815856-14816029
64251 chr2 74438945 74438945 1 + G A UCEC 74438942 + 74438922 74438962 41 ATGTGGGAATAAATAGAGTTCACGATCCTGTAACTGCCAAA ATGTGGGAATAAATAGAGTTCACAATCCTGTAACTGCCAAA < 41bp 0.801756769342777 0.599458280648621 0.04013455 0.044089496 prediction 0.40459697738831 Functional Loss - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74438942 chr2:74438945 nonsynonymous SNV 0.763 3 24 hm5C_associated_SNPs_96898 0 0 29 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:74438874-74438987
64251 chr12 132405711 132405711 1 + G T ESCA 132405707 + 132405687 132405727 41 GGCTGCGTCCCACGCTACCACAAGGCCCTGCTGCTCCTGGA GGCTGCGTCCCACGCTACCACAAGTCCCTGCTGCTCCTGGA < 41bp 0.709186914015704 0.506890907989556 0.8636161 0.35431647 prediction 0.404592012052296 Functional Loss - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132405707 chr12:132405711 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_96899 0 0 1 SRSF1 POSTAR2 ENCODE chr12:132405680-132405753
64251 chr2 74274592 74274592 1 + G A SARC 74274589 + 74274569 74274609 41 AGGGAGGCTCCCACGCCATCCTCGGAGCCCGACACCCACCA AGGGAGGCTCCCACGCCATCCTCAGAGCCCGACACCCACCA < 41bp 0.702292677852328 0.444181015179503 0.51856387 0.1545462 prediction 0.404585355704656 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74274589 chr2:74274592 synonymous SNV . 0 24 hm5C_associated_SNPs_96903 0 0 1 RBM15 POSTAR2 ENCODE chr2:74274558-74274597
64251 chr2 74274591 74274591 1 + C T UCEC 74274589 + 74274569 74274609 41 AGGGAGGCTCCCACGCCATCCTCGGAGCCCGACACCCACCA AGGGAGGCTCCCACGCCATCCTTGGAGCCCGACACCCACCA < 41bp 0.702292677852328 0.438997314819527 0.51856387 0.30654198 prediction 0.404585355704656 Functional Loss - TET3 ENSG00000187605 CDS Human protein_coding chr2:74274589 chr2:74274591 nonsynonymous SNV 0.138 0 23 hm5C_associated_SNPs_96904 0 0 1 RBM15 POSTAR2 ENCODE chr2:74274558-74274597
64251 chr2 242097264 242097264 1 + A T LGG 242097260 + 242097240 242097280 41 TGGACATGGAAACCATCAACCTGGACAGAGATGCAGAGGTA TGGACATGGAAACCATCAACCTGGTCAGAGATGCAGAGGTA < 41bp 0.910328655029257 0.708040742387162 0.31915292 0.23180848 prediction 0.40457582528419 Functional Loss - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242097260 chr2:242097264 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_96907 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:242097235-242097271
64251 chr16 31131698 31131698 1 + C T COAD 31131695 + 31131675 31131715 41 ACGAGTGGGTAGACAAGAACCGGCTGGCGCTGACCAAGACA ACGAGTGGGTAGACAAGAACCGGTTGGCGCTGACCAAGACA < 41bp 0.759653440343211 0.557366396509757 0.48423168 0.29146245 prediction 0.404574087666908 Functional Loss - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131695 chr16:31131698 synonymous SNV . 0 24 hm5C_associated_SNPs_96910 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:31131660-31131784
64251 chr9 130982346 130982346 1 + G A KIRP 130982343 + 130982323 130982363 41 GCCCGTGATGTGCTGGAGAACAAGCTGCTCCCCCTGCGCAG GCCCGTGATGTGCTGGAGAACAAACTGCTCCCCCTGCGCAG < 41bp 0.702285870311225 0.438829330157019 0.3361891 0.13295683 prediction 0.40457174062245 Functional Loss - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130982343 chr9:130982346 synonymous SNV . 0 24 hm5C_associated_SNPs_96911 0 0 5 DDX24 POSTAR2 ENCODE chr9:130982332-130982366
64251 chr9 130207014 130207014 1 + C T COAD 130207011 + 130206991 130207031 41 TGTGGGAAGGCCTTCAGTTACTGCGCAGCGTTCATTCAGCA TGTGGGAAGGCCTTCAGTTACTGTGCAGCGTTCATTCAGCA < 41bp 0.763450888414184 0.561166216457072 0.2644009 0.24216697 prediction 0.404569343914224 Functional Loss - ZNF79 ENSG00000196152 CDS Human protein_coding chr9:130207011 chr9:130207014 synonymous SNV . 0 24 hm5C_associated_SNPs_96912 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:130207000-130207020
64251 chr17 78092152 78092152 1 + G T LGG 78092150 + 78092130 78092170 41 ACACAGGTCATCTTCCTGGCCAGGAATGTGAGTCCTGGGGC ACACAGGTCATCTTCCTGGCCATGAATGTGAGTCCTGGGGC < 41bp 0.915216831312654 0.712938344298202 0.8584367 0.14876002 prediction 0.404556974028903 Functional Loss - GAA ENSG00000171298 CDS Human protein_coding chr17:78092150 chr17:78092152 nonsynonymous SNV 0.020 1 23 hm5C_associated_SNPs_96917 0 0 1 DDX55 POSTAR2 ENCODE chr17:78092134-78092152
64251 chr16 69922045 69922045 1 + G A UCEC 69922042 + 69922022 69922062 41 AGTGTGACCCCGAATCCCAACACGACTTCTCTCCCTGCCCC AGTGTGACCCCGAATCCCAACACAACTTCTCTCCCTGCCCC < 41bp 0.84093184530721 0.638655921639095 0.051123798 0.035143226 prediction 0.40455184733623 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69922042 chr16:69922045 synonymous SNV . 0 24 hm5C_associated_SNPs_96920 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:69922034-69922058
64251 chr2 74090503 74090503 1 + C T rs75034302 74090501 + 74090481 74090521 41 AATGGTGTCATTTGTGACACCTCGAGTGAGGGCAGGAGAGT AATGGTGTCATTTGTGACACCTTGAGTGAGGGCAGGAGAGT < 41bp 0.702273075146315 0.456033157363128 0.26140314 0.033195406 prediction 0.404546150292629 Functional Loss - STAMBP ENSG00000124356 UTR3 Human protein_coding chr2:74090501 chr2:74090503 . . 0 23 hm5C_associated_SNPs_96923 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr2:74090481-74090504
64251 chr1 25688042 25688042 1 + C T rs138543922 25688040 + 25688020 25688060 41 CCACTAGCCTAATAGACCAGCACGGTCAACTAGAATGACAA CCACTAGCCTAATAGACCAGCATGGTCAACTAGAATGACAA < 41bp 0.770797725449876 0.568528820423006 0.17231902 0.097758085 prediction 0.404537810053739 Functional Loss - TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688040 chr1:25688042 . . 0 23 hm5C_associated_SNPs_96924 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:25688042-25688077
64251 chr3 127379659 127379659 1 + A C LIHC 127379658 + 127379638 127379678 41 GGGACCAGGACTCCACCAGCCAAGAGGCAGAGGCCACAGTG GGGACCAGGACTCCACCAGCCCAGAGGCAGAGGCCACAGTG < 41bp 0.853012204550473 0.650754160007079 0.8257023 0.3109089 prediction 0.404516089086787 Functional Loss - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379658 chr3:127379659 nonsynonymous SNV 0.018 0 22 hm5C_associated_SNPs_96929 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:127379621-127379659
64251 chr1 233802670 233802670 1 + G A CESC 233802667 + 233802647 233802687 41 TTTCCCTGAGCACCATTGGCCTGGGGGATTATGTGCCTGGG TTTCCCTGAGCACCATTGGCCTGAGGGATTATGTGCCTGGG < 41bp 0.702250981024334 0.462631362598809 0.5401037 0.18626463 prediction 0.404501962048668 Functional Loss - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802667 chr1:233802670 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_96934 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:233802641-233802685
64251 chr10 131565160 131565160 1 + C T COAD 131565157 + 131565137 131565177 41 GGCTTCTGGCCCATGAAGGCCACCGGTTGGGGAAGCCAGGC GGCTTCTGGCCCATGAAGGCCACTGGTTGGGGAAGCCAGGC < 41bp 0.707989896274189 0.50573934537523 0.38628381 0.45987314 prediction 0.404501101797917 Functional Loss - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565157 chr10:131565160 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_96935 0 0 3 GRSF1 POSTAR2 ENCODE chr10:131565158-131565252
64251 chr1 214170790 214170790 1 + A C rs188226653 214170789 + 214170769 214170809 41 TGAGATGTGCGAGCTAGACCCAGGACAGTTTATTGACCGAG TGAGATGTGCGAGCTAGACCCCGGACAGTTTATTGACCGAG < 41bp 0.836759579394486 0.634518118886876 0.8981353 0.5085901 prediction 0.40448292101522 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170789 chr1:214170790 synonymous SNV . 0 22 hm5C_associated_SNPs_96944 0 0 1 GRWD1 POSTAR2 ENCODE chr1:214170782-214170869
64251 chr19 19627133 19627133 1 + G T LUSC 19627129 + 19627109 19627149 41 ACAAACGGAACTTGCCGCGTCGAGGACTGTCGGGTCAGTAT ACAAACGGAACTTGCCGCGTCGAGTACTGTCGGGTCAGTAT < 41bp 0.737841891533242 0.535606530880619 0.6927432 0.3630214 prediction 0.404470721305245 Functional Loss - NDUFA13 ENSG00000186010;ENSG00000250067;ENSG00000258674 CDS Human other chr19:19627129 chr19:19627133 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_96945 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:19627093-19627134
64251 chr12 6499444 6499444 1 + G T UCEC 6499440 + 6499420 6499460 41 AGGCAGGGGTGCCGCAACAGCAGAGTCCTCTGGACCTGACC AGGCAGGGGTGCCGCAACAGCAGATTCCTCTGGACCTGACC < 41bp 0.745246511488933 0.543013601983871 0.86294115 0.7464164 prediction 0.404465819010124 Functional Loss - LTBR ENSG00000111321 CDS Human protein_coding chr12:6499440 chr12:6499444 nonsynonymous SNV 0.180 2 25 hm5C_associated_SNPs_96946 0 0 1 GRWD1 POSTAR2 ENCODE chr12:6499437-6499498
64251 chr19 1062286 1062286 1 + G T BRCA 1062283 + 1062263 1062303 41 TGGAGCTGCTTGCGCGCCTGCGCGGTGTCCCGGAGGCCCAG TGGAGCTGCTTGCGCGCCTGCGCTGTGTCCCGGAGGCCCAG < 41bp 0.702228324179212 0.315520853933063 0.88677484 0.19167939 prediction 0.404456648358424 Functional Loss - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1062283 chr19:1062286 nonsynonymous SNV 0.171 4 24 hm5C_associated_SNPs_96951 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1062267-1062312
64251 chr11 65743902 65743902 1 + C T UCEC 65743899 + 65743879 65743919 41 TGAAGAAGCTGGAGTCTCGCCAGCGGGGCTGGGAGGAGGAT TGAAGAAGCTGGAGTCTCGCCAGTGGGGCTGGGAGGAGGAT < 41bp 0.741138484632311 0.538914100369039 0.88985527 0.84105873 prediction 0.404448768526545 Functional Loss - SART1 ENSG00000175467 CDS Human protein_coding chr11:65743899 chr11:65743902 nonsynonymous SNV 0.989 3 24 hm5C_associated_SNPs_96952 0 0 12 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:65743892-65743911
64251 chr2 220044878 220044878 1 + G A BLCA 220044875 + 220044855 220044895 41 GGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTG GGCCGCACCTGCTGAGTGTGCCCAAGTTGTGCAGATACCTG < 41bp 0.822373815261863 0.620153617797116 0.18342537 0.06288472 prediction 0.404440394929495 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044875 chr2:220044878 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_96957 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220044851-220044880
64251 chr10 43882502 43882502 1 - G A PAAD 43882505 - 43882485 43882525 41 GGAATGTATGACCACAGATACGGCGACAGTGAGTTCACAGT GGAATGTATGACCACAGATACGGTGACAGTGAGTTCACAGT < 41bp 0.702211071353289 0.483031984935852 0.7127833 0.36745024 prediction 0.404422142706578 Functional Loss - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882505 chr10:43882502 synonymous SNV . 0 24 hm5C_associated_SNPs_96967 0 0 22 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882456-43882580
64251 chr16 2108821 2108821 1 + C T GBM 2108818 + 2108798 2108838 41 GCATGGCTCTCTGGGGAGCCCACCGGCTCTATTCTCTCAGG GCATGGCTCTCTGGGGAGCCCACTGGCTCTATTCTCTCAGG < 41bp 0.702210540040777 0.493214747235002 0.21841899 0.24511248 prediction 0.404421080081554 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2108818 chr16:2108821 nonsynonymous SNV 0.993 5 24 hm5C_associated_SNPs_96968 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:2108820-2108840
64251 chr16 5128781 5128781 1 + C T COAD 5128779 + 5128759 5128799 41 TCAGAACCTGAGGACCCAGTCACGGAGCGGTCGGCCTTCAC TCAGAACCTGAGGACCCAGTCATGGAGCGGTCGGCCTTCAC < 41bp 0.857044439077404 0.65483464770233 0.68325365 0.79116637 prediction 0.404419582750148 Functional Loss - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128779 chr16:5128781 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_96969 0 0 5 GRWD1 POSTAR2 ENCODE chr16:5128768-5128862
64251 chr11 67377938 67377938 1 + C T UCEC 67377936 + 67377916 67377956 41 ATTTTGACGTGTTTGTGGTGCGCGGGGCTGGGGCCTACATC ATTTTGACGTGTTTGTGGTGCGTGGGGCTGGGGCCTACATC < 41bp 0.849641380061473 0.647435985876807 0.5115473 0.7252424 prediction 0.404410788369332 Functional Loss - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67377936 chr11:67377938 synonymous SNV . 0 23 hm5C_associated_SNPs_96973 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr11:67377873-67377946
64251 chr16 14334274 14334274 1 + C T UCEC 14334271 + 14334251 14334291 41 TCCAGCAGCAGCAGCTGTTCCTGCAACTGCAGATCCTGAGT TCCAGCAGCAGCAGCTGTTCCTGTAACTGCAGATCCTGAGT < 41bp 0.702204551772322 0.470134092482759 0.8952798 0.9066682 prediction 0.404409103544643 Functional Loss - MKL2 ENSG00000186260 CDS Human protein_coding chr16:14334271 chr16:14334274 stopgain 0.565 1 24 hm5C_associated_SNPs_96974 0 0 2 GRWD1 POSTAR2 ENCODE chr16:14334111-14334278
64251 chr9 130430413 130430413 1 + G A UCEC 130430410 + 130430390 130430430 41 GTGAAGGAGGTGCTCCTGGACGAGGACGACGACCTGTGGAT GTGAAGGAGGTGCTCCTGGACGAAGACGACGACCTGTGGAT < 41bp 0.840077622989206 0.637874151748551 0.7588576 0.37459233 prediction 0.40440694248131 Functional Loss - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130430410 chr9:130430413 synonymous SNV . 0 24 hm5C_associated_SNPs_96975 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr9:130430392-130430437
64251 chr3 45052755 45052755 1 + A T HNSC 45052751 + 45052731 45052771 41 GCAAGCGTGTGGGCAAGGTACTGCATGCCTCCTTGCAGAGT GCAAGCGTGTGGGCAAGGTACTGCTTGCCTCCTTGCAGAGT < 41bp 0.917985081966059 0.715781889664775 0.05558738 0.022559643 prediction 0.404406384602569 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45052751 chr3:45052755 nonsynonymous SNV 0.810 2 25 hm5C_associated_SNPs_96977 0 0 2 BUD13 POSTAR2 ENCODE chr3:45052662-45052787
64251 chr9 71836352 71836352 1 + G A UCEC 71836349 + 71836329 71836369 41 CGCACTCACGGAGCCCCAGCCCCGAGCCTAGGGGGCGGCCG CGCACTCACGGAGCCCCAGCCCCAAGCCTAGGGGGCGGCCG < 41bp 0.70219860379333 0.455541485528486 0.85460615 0.5051259 prediction 0.40439720758666 Functional Loss - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71836349 chr9:71836352 nonsynonymous SNV 0.239 1 24 hm5C_associated_SNPs_96982 0 0 2 FMR1 POSTAR2 ENCODE chr9:71836343-71836391
64251 chr12 132609828 132609828 1 + A C rs549218502 132609827 + 132609807 132609847 41 GCCCGGGGCACAGCCAACCACACAAGTGCAAGTGCAGCCGT GCCCGGGGCACAGCCAACCACCCAAGTGCAAGTGCAGCCGT < 41bp 0.840295816823576 0.638098899382516 0.47796127 0.4118412 prediction 0.40439383488212 Functional Loss - EP400NL ENSG00000185684 UTR3 Human protein_coding chr12:132609827 chr12:132609828 . . 0 22 hm5C_associated_SNPs_96983 0 0 1 BUD13 POSTAR2 ENCODE chr12:132609722-132609850
64251 chr8 27364474 27364474 1 + C T COAD 27364472 + 27364452 27364492 41 ATCCTGGTCCAGGACACTGACACGGCCCTGAAAGAACTGGA ATCCTGGTCCAGGACACTGACATGGCCCTGAAAGAACTGGA < 41bp 0.702196180446859 0.426697088039471 0.01101926 0.02147916 prediction 0.404392360893718 Functional Loss - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27364472 chr8:27364474 nonsynonymous SNV 0.004 0 23 hm5C_associated_SNPs_96985 0 0 6 DDX24 POSTAR2 ENCODE chr8:27364462-27364498
64251 chr9 133738320 133738320 1 + G A rs2229069 133738317 + 133738297 133738337 41 GACAAGTGGGAGATGGAACGCACGGACATCACCATGAAGCA GACAAGTGGGAGATGGAACGCACAGACATCACCATGAAGCA < 41bp 0.702196172593247 0.453071696762192 0.056585968 0.0106806755 prediction 0.404392345186494 Functional Loss - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133738317 chr9:133738320 synonymous SNV . 0 24 hm5C_associated_SNPs_96986 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr9:133738300-133738320
64251 chr2 74757176 74757176 1 + C T BLCA 74757173 + 74757153 74757193 41 GGCGGGGTGCAGGCTGGAGCCTTCGGGCATGGCGGGCTTTG GGCGGGGTGCAGGCTGGAGCCTTTGGGCATGGCGGGCTTTG < 41bp 0.716350715767912 0.514155778652192 0.59988964 0.46396947 prediction 0.404389874231439 Functional Loss - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757173 chr2:74757176 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_96987 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:74757172-74757198
64251 chr15 85325929 85325929 1 + A C UCEC 85325925 + 85325905 85325945 41 CCATGGGGGATATGAAAACCCCAGATTTTGATGACCTTCTG CCATGGGGGATATGAAAACCCCAGCTTTTGATGACCTTCTG < 41bp 0.702190851688964 0.300514445206053 0.13319859 0.112710595 prediction 0.404381703377929 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85325925 chr15:85325929 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_96989 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:85325916-85325957
64251 chr2 73477477 73477477 1 + T C LUSC 73477476 + 73477456 73477496 41 CCCAAGGCCAAGACATGCACCTTCATTCTCCGTGGCGGCGC CCCAAGGCCAAGACATGCACCCTCATTCTCCGTGGCGGCGC < 41bp 0.702180876279011 0.419867358251625 0.2320368 0.017904311 prediction 0.404361752558022 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73477476 chr2:73477477 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_96997 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:73477472-73477498
64251 chr14 103059661 103059661 1 + C T SARC 103059658 + 103059638 103059678 41 GCGGTGGTGCCCGACTTCGACCCCGGTGAGTAGCGGCCCCG GCGGTGGTGCCCGACTTCGACCCTGGTGAGTAGCGGCCCCG < 41bp 0.702179193550137 0.498317200769146 0.088130504 0.09673393 prediction 0.404358387100273 Functional Loss - RCOR1 ENSG00000089902 CDS Human protein_coding chr14:103059658 chr14:103059661 synonymous SNV . 0 24 hm5C_associated_SNPs_96999 0 0 2 BUD13 POSTAR2 ENCODE chr14:103059587-103059665
64251 chr14 69908917 69908917 1 + G A BRCA 69908914 + 69908894 69908934 41 ATGCCTATATTGGTGTTTCCCTCGTTCTGGGCTTCGTTTTC ATGCCTATATTGGTGTTTCCCTCATTCTGGGCTTCGTTTTC < 41bp 0.702177949038505 0.459653782769649 0.0801208 0.082009405 prediction 0.404355898077009 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69908914 chr14:69908917 nonsynonymous SNV 0.895 2 24 hm5C_associated_SNPs_97001 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr14:69908900-69908956
64251 chr14 69908916 69908916 1 + C T SKCM 69908914 + 69908894 69908934 41 ATGCCTATATTGGTGTTTCCCTCGTTCTGGGCTTCGTTTTC ATGCCTATATTGGTGTTTCCCTTGTTCTGGGCTTCGTTTTC < 41bp 0.702177949038505 0.399085919000263 0.0801208 0.09113571 prediction 0.404355898077009 Functional Loss - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69908914 chr14:69908916 synonymous SNV . 0 23 hm5C_associated_SNPs_97002 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr14:69908900-69908956
64251 chr11 9430080 9430080 1 + G A BLCA 9430077 + 9430057 9430097 41 TAACACAGTATTGGCCTGATCGAGAAACAGCACCAGGGGAT TAACACAGTATTGGCCTGATCGAAAAACAGCACCAGGGGAT < 41bp 0.793772665375464 0.591600748060415 0.874153 0.33529723 prediction 0.404343834630099 Functional Loss - IPO7 ENSG00000205339 CDS Human protein_coding chr11:9430077 chr11:9430080 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_97010 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:9430052-9430107
64251 chr19 16244226 16244226 1 + G A rs1043407 16244223 + 16244203 16244243 41 GCGACTGGGACCAGGTCAACCACGCCAGGGGGGTGTCACCA GCGACTGGGACCAGGTCAACCACACCAGGGGGGTGTCACCA < 41bp 0.702165381272477 0.48339133252761 0.38846332 0.21040341 prediction 0.404330762544954 Functional Loss - RAB8A ENSG00000269243 ncRNA_exonic Human antisense chr19:16244223 chr19:16244226 . . 0 24 hm5C_associated_SNPs_97017 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:16244160-16244260
64251 chr19 58991385 58991385 1 - G A rs372496370 58991387 - 58991367 58991407 41 TGGATGGTGTGGGGCACTCACCCGAGCGCAGGCTTCTGCAG TGGATGGTGTGGGGCACTCACCTGAGCGCAGGCTTCTGCAG < 41bp 0.790122927383986 0.587961089244146 0.3920347 0.2562737 prediction 0.40432367627968 Functional Loss - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58991387 chr19:58991385 nonsynonymous SNV 0.011 0 23 hm5C_associated_SNPs_97023 0 0 13 CSTF2T POSTAR2 ENCODE chr19:58991362-58991429
64251 chr17 2937064 2937064 1 + G A rs531806152 2937061 + 2937041 2937081 41 GTAGGGGGTGGGAGCAGAGCCTCGGTGAGGGTCTTGGCCAC GTAGGGGGTGGGAGCAGAGCCTCAGTGAGGGTCTTGGCCAC < 41bp 0.824370689281423 0.622211730242269 0.7792479 0.39661503 prediction 0.404317918078309 Functional Loss - RAP1GAP2 ENSG00000132359 UTR3 Human protein_coding chr17:2937061 chr17:2937064 . . 0 24 hm5C_associated_SNPs_97026 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:2936972-2937065
64251 chr7 148921671 148921671 1 + C T COAD 148921668 + 148921648 148921688 41 AGGAGTCGCTCAAGGACCACCTGCGCGTGCACAGCGGCGGC AGGAGTCGCTCAAGGACCACCTGTGCGTGCACAGCGGCGGC < 41bp 0.711279335901107 0.509121655104355 0.18762323 0.21790788 prediction 0.404315361593503 Functional Loss - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921668 chr7:148921671 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_97027 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:148921660-148921680
64251 chr13 115048568 115048568 1 + G A rs147404070 115048565 + 115048545 115048585 41 TGGAGTGCAGCAGCCGCAATCACGGCTCACTGCAGCCTCAC TGGAGTGCAGCAGCCGCAATCACAGCTCACTGCAGCCTCAC < 41bp 0.806746766849553 0.604589318590086 0.9274597 0.8987787 prediction 0.404314896518935 Functional Loss - UPF3A ENSG00000169062 intronic Human protein_coding chr13:115048565 chr13:115048568 . . 0 24 hm5C_associated_SNPs_97028 0 0 3 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr13:115048564-115048585
64251 chr3 142840375 142840375 1 + C T COAD 142840372 + 142840352 142840392 41 CAGTTGTATAGCCCCGCGGGCAGCGGGGGGCGCAACCTCAC CAGTTGTATAGCCCCGCGGGCAGTGGGGGGCGCAACCTCAC < 41bp 0.706699657853747 0.504545561495648 0.90297794 0.8968192 prediction 0.404308192716198 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840372 chr3:142840375 synonymous SNV . 0 24 hm5C_associated_SNPs_97031 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:142840341-142840393
64251 chr12 3129870 3129870 1 + C T UCEC 3129867 + 3129847 3129887 41 GCACCCCCATGGCAGGGCCGCAGCGTGGCCAGCTCCAAGCT GCACCCCCATGGCAGGGCCGCAGTGTGGCCAGCTCCAAGCT < 41bp 0.714715445655617 0.512566742140792 0.65534973 0.34971374 prediction 0.404297407029649 Functional Loss - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3129867 chr12:3129870 synonymous SNV . 0 24 hm5C_associated_SNPs_97032 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:3129836-3129876
64251 chr19 54491255 54491255 1 + C T rs193128086 54491253 + 54491233 54491273 41 AAAACGAGCTTAGGAGTGATCTCGAGGTAGGCTGAAACCAG AAAACGAGCTTAGGAGTGATCTTGAGGTAGGCTGAAACCAG < 41bp 0.743985906588807 0.541837624930711 0.5117629 0.21397457 prediction 0.404296563316192 Functional Loss - CACNG8 ENSG00000142408 UTR3 Human protein_coding chr19:54491253 chr19:54491255 . . 0 23 hm5C_associated_SNPs_97033 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:54491236-54491269
64251 chr4 76649835 76649835 1 + G C rs116386875 76649834 + 76649814 76649854 41 CGCATCTTGGCCGCTGCTGGCGGCTGTTTCCGGGCTTAGAG CGCATCTTGGCCGCTGCTGGCCGCTGTTTCCGGGCTTAGAG < 41bp 0.702147613123424 0.404390362051088 0.9107089 0.2212283 prediction 0.404295226246849 Functional Loss - USO1 ENSG00000138768 UTR5 Human protein_coding chr4:76649834 chr4:76649835 . . 0 22 hm5C_associated_SNPs_97034 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:76649824-76649860
64251 chr15 40764367 40764367 1 + G A UCEC 40764364 + 40764344 40764384 41 AGTGGGTACGGGCACCACCTCACGTCCGATTTCCAGCTCGC AGTGGGTACGGGCACCACCTCACATCCGATTTCCAGCTCGC < 41bp 0.70214727028177 0.446605363319262 0.55009437 0.19864547 prediction 0.40429454056354 Functional Loss - CHST14 ENSG00000169105 CDS Human protein_coding chr15:40764364 chr15:40764367 nonsynonymous SNV 0.193 0 24 hm5C_associated_SNPs_97036 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:40764349-40764379
64251 chr10 60145202 60145202 1 + C T rs45486593 60145200 + 60145180 60145220 41 GCTAGTGGCGGGCATGATAACACACGCCGGAGGGTCGCACG GCTAGTGGCGGGCATGATAACATACGCCGGAGGGTCGCACG < 41bp 0.779693820605882 0.577558960420611 0.06109053 0.053860098 prediction 0.404269720370543 Functional Loss - TFAM ENSG00000108064 UTR5 Human protein_coding chr10:60145200 chr10:60145202 . . 0 23 hm5C_associated_SNPs_97048 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:60145194-60145220
64251 chr2 36668550 36668550 1 + C T STAD 36668547 + 36668527 36668567 41 TGTGCAACCCCGCAGGCTGTCTGCGCAAAGTCTGCCAGCCG TGTGCAACCCCGCAGGCTGTCTGTGCAAAGTCTGCCAGCCG < 41bp 0.778355349823246 0.576221892604776 0.21880311 0.18233877 prediction 0.40426691443694 Functional Loss - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668547 chr2:36668550 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_97049 0 0 2 PPIG POSTAR2 ENCODE chr2:36668471-36668572
64251 chr14 31358870 31358870 1 - T G HNSC 31358871 - 31358851 31358891 41 GGTTTAGAAGCCATATCTTTCAGGTCATCCAGAGGTGCCCA GGTTTAGAAGCCATATCTTTCCGGTCATCCAGAGGTGCCCA < 41bp 0.84097232726452 0.638839213716106 0.89529014 0.83199775 prediction 0.40426622709683 Functional Loss - COCH ENSG00000100473 CDS Human protein_coding chr14:31358871 chr14:31358870 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_97050 0 0 1 GRWD1 POSTAR2 ENCODE chr14:31358812-31358913
64251 chr2 220379409 220379409 1 + G C LUAD 220379405 + 220379385 220379425 41 GGCTGCTGGCTAGGGAGGGACAGGGCAGGGAGGCTCTGGCC GGCTGCTGGCTAGGGAGGGACAGGCCAGGGAGGCTCTGGCC < 41bp 0.888381443347333 0.686249169942421 0.9163096 0.8699485 prediction 0.404264546809824 Functional Loss - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379405 chr2:220379409 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_97051 0 0 1 AKAP8L POSTAR2 ENCODE chr2:220379393-220379442
64251 chr2 190526281 190526281 1 + C T rs74593114 190526279 + 190526259 190526299 41 GGGACGCGACCAGAGGACAGCTCTGTGCTGATCCCCACCGA GGGACGCGACCAGAGGACAGCTTTGTGCTGATCCCCACCGA < 41bp 0.702130549724943 0.492996476484161 0.31268996 0.20918167 prediction 0.404261099449885 Functional Loss - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190526279 chr2:190526281 nonsynonymous SNV 0.011 0 23 hm5C_associated_SNPs_97053 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:190526257-190526298
64251 chr5 159491991 159491991 1 + G A UCEC 159491988 + 159491968 159492008 41 CTCCGACCTTTTGGGCTCTCCACGGAAAATTTCCAGATCAA CTCCGACCTTTTGGGCTCTCCACAGAAAATTTCCAGATCAA < 41bp 0.785982980356782 0.58385417857136 0.5556938 0.18517116 prediction 0.404257603570844 Functional Loss - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159491988 chr5:159491991 synonymous SNV . 0 24 hm5C_associated_SNPs_97054 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:159491955-159491994
64251 chr1 66064395 66064395 1 + G A HNSC 66064392 + 66064372 66064412 41 GCTAGTAGACAGTATACTTCCTGGGTCTTCGTATGAGGTTC GCTAGTAGACAGTATACTTCCTGAGTCTTCGTATGAGGTTC < 41bp 0.808309818625949 0.606181132336522 0.21469897 0.06117049 prediction 0.404257372578854 Functional Loss - LEPR ENSG00000116678 CDS Human protein_coding chr1:66064392 chr1:66064395 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_97055 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:66064383-66064402
64251 chr2 32865408 32865408 1 + G A UCEC 32865405 + 32865385 32865425 41 GAATCAATCTACAGCCTGACCTCGAAGCCTATACTACTGTT GAATCAATCTACAGCCTGACCTCAAAGCCTATACTACTGTT < 41bp 0.808513710940968 0.6063862948616 0.87860924 0.19286525 prediction 0.404254832158736 Functional Loss - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32865405 chr2:32865408 synonymous SNV . 0 24 hm5C_associated_SNPs_97057 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32865400-32865420
64251 chr3 128525253 128525253 1 + C T rs4548 128525251 + 128525231 128525271 41 GACAGGAACGGTTCCAGTCTCTCGGTGTGGCCTTCTACAGA GACAGGAACGGTTCCAGTCTCTTGGTGTGGCCTTCTACAGA < 41bp 0.881332703561069 0.679205459268105 0.12242216 0.10944283 prediction 0.404254488585928 Functional Loss - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128525251 chr3:128525253 synonymous SNV . 0 23 hm5C_associated_SNPs_97058 2 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:128525213-128525290
64251 chr6 26376693 26376693 1 + C T rs530113292 26376691 + 26376671 26376711 41 CATTCAGGGCAGGCTAGGGACACGGGGTTCTGGAAGGACCT CATTCAGGGCAGGCTAGGGACATGGGGTTCTGGAAGGACCT < 41bp 0.791617559357905 0.589491151437802 0.18891993 0.31765133 prediction 0.404252815840207 Functional Loss - BTN3A2 ENSG00000186470 intronic Human protein_coding chr6:26376691 chr6:26376693 . . 0 23 hm5C_associated_SNPs_97061 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:26376665-26376716
64251 chr15 66607413 66607413 1 + G A STAD 66607410 + 66607390 66607430 41 CCTAATCCACGGGATGAAGGCTCGAAACCGCTCAATTCATG CCTAATCCACGGGATGAAGGCTCAAAACCGCTCAATTCATG < 41bp 0.798964134194475 0.596838327484351 0.19977146 0.12420246 prediction 0.404251613420248 Functional Loss - DIS3L ENSG00000166938 CDS Human protein_coding chr15:66607410 chr15:66607413 nonsynonymous SNV 0.953 1 24 hm5C_associated_SNPs_97062 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:66607413-66607442
64251 chr11 1477639 1477639 1 + C T LGG 1477637 + 1477617 1477657 41 TTCCGGGCCGAGTACAAGGCCACGGGGGGGCCAGCCGTGTT TTCCGGGCCGAGTACAAGGCCATGGGGGGGCCAGCCGTGTT < 41bp 0.702121481051928 0.444467004449295 0.4146659 0.72005934 prediction 0.404242962103857 Functional Loss - BRSK2 ENSG00000174672 CDS Human protein_coding chr11:1477637 chr11:1477639 nonsynonymous SNV 0.068 2 23 hm5C_associated_SNPs_97065 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:1477595-1477648
64251 chr3 149613346 149613346 1 + C T GBM 149613343 + 149613323 149613363 41 CTCATTAGCATGGGATCCAACGACAGTAAGTACAGGTATCA CTCATTAGCATGGGATCCAACGATAGTAAGTACAGGTATCA < 41bp 0.702117582623838 0.481356976843984 0.23779643 0.25606298 prediction 0.404235165247675 Functional Loss - RNF13 ENSG00000082996 CDS Human protein_coding chr3:149613343 chr3:149613346 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97070 0 0 1 PRPF8 POSTAR2 ENCODE chr3:149613339-149613384
64251 chr5 77712443 77712443 1 + G A SKCM 77712440 + 77712420 77712460 41 AAGCCGCAGAATTAGATCGTCGGGAACGAGAAATGCAAAAC AAGCCGCAGAATTAGATCGTCGGAAACGAGAAATGCAAAAC < 41bp 0.744777993796512 0.542662725436979 0.87459224 0.7534057 prediction 0.404230536719067 Functional Loss - SCAMP1 ENSG00000085365 CDS Human protein_coding chr5:77712440 chr5:77712443 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_97072 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:77712401-77712447
64251 chr12 71977666 71977666 1 + C T STAD 71977664 + 71977644 71977684 41 GTTCACTTTTGGCAGCTTTGCACGACATGGTGCCTGGTGGG GTTCACTTTTGGCAGCTTTGCATGACATGGTGCCTGGTGGG < 41bp 0.867702826418982 0.665589688675423 0.23376337 0.23640442 prediction 0.404226275487116 Functional Loss - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977664 chr12:71977666 stopgain 0.048 0 23 hm5C_associated_SNPs_97073 0 0 3 EIF3H POSTAR2 ENCODE chr12:71977634-71977689
64251 chr11 65479617 65479617 1 + G C rs572971003 65479613 + 65479593 65479633 41 GGCAGTCTTGCCCCTCGCAGCTGGGTCGCGGTGTCTCTCAA GGCAGTCTTGCCCCTCGCAGCTGGCTCGCGGTGTCTCTCAA < 41bp 0.859999475090652 0.65789177990579 0.23098147 0.14137945 prediction 0.404215390369723 Functional Loss - KAT5 ENSG00000172977 UTR5 Human protein_coding chr11:65479613 chr11:65479617 . . 0 25 hm5C_associated_SNPs_97078 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr11:65479602-65479625
64251 chr19 57802630 57802630 1 + C T UCEC 57802628 + 57802608 57802648 41 CAACCGCAGGTCACACCTCACACGGCACCAGCGGACTCACA CAACCGCAGGTCACACCTCACATGGCACCAGCGGACTCACA < 41bp 0.702107055891717 0.442449790382701 0.14599815 0.28137022 prediction 0.404214111783435 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802628 chr19:57802630 nonsynonymous SNV 0.112 3 23 hm5C_associated_SNPs_97079 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57802418-57802692
64251 chr19 17212808 17212808 1 + G T LUAD 17212804 + 17212784 17212824 41 ACCGGGTGCTGCTATGGCCCCGGCGGGCACAGGACGAGCAC ACCGGGTGCTGCTATGGCCCCGGCTGGCACAGGACGAGCAC < 41bp 0.739372630900296 0.537269927359259 0.69111186 0.42680275 prediction 0.404205407082075 Functional Loss - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17212804 chr19:17212808 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_97083 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:17212800-17212820
64251 chr20 56139562 56139562 1 + C T BLCA 56139560 + 56139540 56139580 41 GAACCTTGTGCCCACCCCAACTCGAGGTTCTGCACCCCTGC GAACCTTGTGCCCACCCCAACTTGAGGTTCTGCACCCCTGC < 41bp 0.882258016657676 0.680156226102718 0.9062958 0.79231536 prediction 0.404203581109915 Functional Loss - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139560 chr20:56139562 nonsynonymous SNV 0.807 4 23 hm5C_associated_SNPs_97085 0 0 2 GRWD1 POSTAR2 ENCODE chr20:56139537-56139562
64251 chr11 60696229 60696229 1 + C T STAD 60696226 + 60696206 60696246 41 GAGGGCCCTGGGGGCTGTGGCTCCGGCGAGGAGAACGACCC GAGGGCCCTGGGGGCTGTGGCTCTGGCGAGGAGAACGACCC < 41bp 0.759526332875847 0.557425313285709 0.77074206 0.3913814 prediction 0.404202039180277 Functional Loss - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696226 chr11:60696229 synonymous SNV . 0 24 hm5C_associated_SNPs_97086 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:60696208-60696237
64251 chr2 179402367 179402367 1 + G A ESCA 179402364 + 179402344 179402384 41 TGGAACTGCGGTGTTGCTTGCAGGAGAAGCTTACTACTGGT TGGAACTGCGGTGTTGCTTGCAGAAGAAGCTTACTACTGGT < 41bp 0.764946052939851 0.562846112412667 0.9420937 0.7890455 prediction 0.404199881054369 Functional Loss - TTN ENSG00000155657 CDS Human protein_coding chr2:179402364 chr2:179402367 synonymous SNV . 0 24 hm5C_associated_SNPs_97087 7 0 2 BUD13 POSTAR2 ENCODE chr2:179402332-179402389
64251 chr12 7061302 7061302 1 + C T PAAD 7061300 + 7061280 7061320 41 GCGACGGCACCATCATCCACCTCAAGTACCCGCTGAACTGC GCGACGGCACCATCATCCACCTTAAGTACCCGCTGAACTGC < 41bp 0.702097888548888 0.41186730394318 0.103072345 0.055245847 prediction 0.404195777097777 Functional Loss - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7061300 chr12:7061302 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_97089 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:7061296-7061330
64251 chr12 121434172 121434172 1 + G T LUAD 121434168 + 121434148 121434188 41 CCCCTCCACCAAGTGTCCCCCACGGGCCTGGAGCCCAGCCA CCCCTCCACCAAGTGTCCCCCACGTGCCTGGAGCCCAGCCA < 41bp 0.72312164446887 0.521035160281751 0.23930895 0.15678024 prediction 0.404172968374237 Functional Loss - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121434168 chr12:121434172 nonsynonymous SNV 0.963 2 25 hm5C_associated_SNPs_97097 0 0 1 PPIG POSTAR2 ENCODE chr12:121434139-121434217
64251 chr13 37582892 37582892 1 + G A UCEC 37582889 + 37582869 37582909 41 TTTGCTTATAGTTGACCCTACTGGAGAGGAGGAACATCTGG TTTGCTTATAGTTGACCCTACTGAAGAGGAGGAACATCTGG < 41bp 0.7750287147873 0.572945257280643 0.16401842 0.10560778 prediction 0.404166915013314 Functional Loss - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37582889 chr13:37582892 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_97100 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr13:37582866-37582963
64251 chr2 239007721 239007721 1 + G A rs78235106 239007718 + 239007698 239007738 41 GGGCTGCGCACTTCCCTGTCCACGGTCCCCAGGCCTTCCTG GGGCTGCGCACTTCCCTGTCCACAGTCCCCAGGCCTTCCTG < 41bp 0.82138500627013 0.619301854309821 0.41531187 0.18953887 prediction 0.404166303920619 Functional Loss - UBE2F-SCLY ENSG00000132330;ENSG00000258984 UTR3 Human other chr2:239007718 chr2:239007721 . . 0 24 hm5C_associated_SNPs_97101 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:239007715-239007755
64251 chr10 13231045 13231045 1 + C T UCEC 13231042 + 13231022 13231062 41 CTGTGCCAAGATGGCTTTTACTACGGAGGGGTTTCTTCTGC CTGTGCCAAGATGGCTTTTACTATGGAGGGGTTTCTTCTGC < 41bp 0.7805330531253 0.578450333663897 0.31802326 0.29261607 prediction 0.404165438922805 Functional Loss - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13231042 chr10:13231045 synonymous SNV . 0 24 hm5C_associated_SNPs_97102 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:13231016-13231050
64251 chr15 42127259 42127259 1 + G T CESC 42127257 + 42127237 42127277 41 GGATCGCTTCATGATGCCAGCTGAGCGCCGCCTGCCCCTGA GGATCGCTTCATGATGCCAGCTTAGCGCCGCCTGCCCCTGA < 41bp 0.702081612361311 0.34021779581634 0.22787967 0.03745514 prediction 0.404163224722622 Functional Loss - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127257 chr15:42127259 stopgain 0.979 1 23 hm5C_associated_SNPs_97104 0 0 1 RPS5 POSTAR2 ENCODE chr15:42127258-42127301
64251 chr2 55462059 55462059 1 + G A HNSC 55462056 + 55462036 55462076 41 ACTCCCAAGAAGAATAAGCACAAGAGAAAGAAGGTTAAGCT ACTCCCAAGAAGAATAAGCACAAAAGAAAGAAGGTTAAGCT < 41bp 0.763890166369464 0.561808981560078 0.8377562 0.29265118 prediction 0.404162369618772 Functional Loss - RPS27A ENSG00000143947 CDS Human protein_coding chr2:55462056 chr2:55462059 synonymous SNV . 0 24 hm5C_associated_SNPs_97105 0 0 1 EIF4G2 POSTAR2 ENCODE chr2:55461977-55462070
64251 chr1 46073323 46073323 1 + G A PAAD 46073320 + 46073300 46073340 41 TGAGGAAGAAAAATCAGTTTCTGGAACTGATGTCCAAGAAG TGAGGAAGAAAAATCAGTTTCTGAAACTGATGTCCAAGAAG < 41bp 0.825647350162764 0.623567765676284 0.30790538 0.2571689 prediction 0.404159168972961 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073320 chr1:46073323 nonsynonymous SNV 0.448 2 24 hm5C_associated_SNPs_97107 0 0 5 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr1:46073320-46073340
64251 chr11 11958020 11958020 1 + A C UCEC 11958016 + 11957996 11958036 41 GTTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTT GTTTGATCTGCTGTTGGAGACGAGCAAGCCTGATCAGGTTT < 41bp 0.702078265737927 0.298669870939529 0.08903545 0.18457487 prediction 0.404156531475855 Functional Loss - USP47 ENSG00000170242 CDS Human protein_coding chr11:11958016 chr11:11958020 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_97108 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:11957991-11958029
64251 chr22 29446131 29446131 1 + G A UCEC 29446128 + 29446108 29446148 41 TGGCCGGGCCCTGCCTCTCCCTCGGGGGATCAGGTGTCCAC TGGCCGGGCCCTGCCTCTCCCTCAGGGGATCAGGTGTCCAC < 41bp 0.835414159801253 0.633337859847971 0.09825209 0.019699037 prediction 0.404152599906564 Functional Loss - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446128 chr22:29446131 synonymous SNV . 0 24 hm5C_associated_SNPs_97112 0 0 4 GRWD1 POSTAR2 ENCODE chr22:29446103-29446199
64251 chr2 70315012 70315012 1 + G T UCEC 70315009 + 70314989 70315029 41 GATCCGCGAGGAGAGTGGCGCGCGGATCAACATCTCGGAGG GATCCGCGAGGAGAGTGGCGCGCTGATCAACATCTCGGAGG < 41bp 0.935905851515003 0.733830641128984 0.36857408 0.14052176 prediction 0.404150420772037 Functional Loss - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315009 chr2:70315012 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_97113 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:70314940-70315014
64251 chr5 149432040 149432040 1 + G A rs2116810 149432037 + 149432017 149432057 41 AGGGGAGGCTGAGGGAAAGGCTCGTAGCTGGTGGGTTCCGT AGGGGAGGCTGAGGGAAAGGCTCATAGCTGGTGGGTTCCGT < 41bp 0.702066119036729 0.457443787984484 0.40527433 0.41267645 prediction 0.404132238073458 Functional Loss - HMGXB3 ENSG00000113716 UTR3 Human protein_coding chr5:149432037 chr5:149432040 . . 0 24 hm5C_associated_SNPs_97117 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:149432008-149432043
64251 chr7 97821008 97821008 1 + C T PAAD 97821005 + 97820985 97821025 41 TGCACAGGCTGCTGACTTACCTGCGGCTGCAGAGCCAGCGG TGCACAGGCTGCTGACTTACCTGTGGCTGCAGAGCCAGCGG < 41bp 0.768651684654362 0.566586622318395 0.89750725 0.35537866 prediction 0.404130124671934 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97821005 chr7:97821008 nonsynonymous SNV 0.903 3 24 hm5C_associated_SNPs_97119 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr7:97820960-97821013
64251 chr22 38274115 38274115 1 + C T GBM 38274112 + 38274092 38274132 41 ATGAAGAACCTCGTGTGGACCAGCGGTATCTCAGCCCTGGA ATGAAGAACCTCGTGTGGACCAGTGGTATCTCAGCCCTGGA < 41bp 0.764810894905238 0.562747004850576 0.7345703 0.39089885 prediction 0.404127780109324 Functional Loss - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38274112 chr22:38274115 synonymous SNV . 0 24 hm5C_associated_SNPs_97121 0 0 28 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:38274091-38274116
64251 chr2 70047952 70047952 1 + A T LIHC 70047950 + 70047930 70047970 41 AAGTCTCTGTACTCGTTCATCAAGGTAGGTCACAGCAGCCT AAGTCTCTGTACTCGTTCATCATGGTAGGTCACAGCAGCCT < 41bp 0.715012982741496 0.512949605043714 0.8885108 0.8411217 prediction 0.404126755395565 Functional Loss - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70047950 chr2:70047952 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_97122 0 0 4 LSM11 POSTAR2 ENCODE chr2:70047887-70047955
64251 chr20 33296573 33296573 1 + C T HNSC 33296570 + 33296550 33296590 41 CAGCGCCTCTCCAGCCTCTTCTTCAGCACCCCCTCGCCCCC CAGCGCCTCTCCAGCCTCTTCTTTAGCACCCCCTCGCCCCC < 41bp 0.734952690618546 0.532889530892846 0.062740624 0.056164354 prediction 0.404126319451401 Functional Loss - TP53INP2 ENSG00000078804 CDS Human protein_coding chr20:33296570 chr20:33296573 synonymous SNV . 0 24 hm5C_associated_SNPs_97123 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221660 chr20:33296572-33296573
64251 chr6 3140730 3140730 1 + G A UCEC 3140727 + 3140707 3140747 41 ATGCCGACTTCATTCATAAGCACGTGAAAGGCTCACGGTAA ATGCCGACTTCATTCATAAGCACATGAAAGGCTCACGGTAA < 41bp 0.823039136173067 0.620978843852337 0.38430458 0.3204205 prediction 0.404120584641459 Functional Loss - BPHL ENSG00000137274 CDS Human protein_coding chr6:3140727 chr6:3140730 nonsynonymous SNV 0.203 4 24 hm5C_associated_SNPs_97127 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:3140718-3140743
64251 chr8 145151504 145151504 1 + A T LUSC 145151502 + 145151482 145151522 41 CCTAGGCATGGTGGTGAGGACTACGTCTTCTCCCTGCTCAC CCTAGGCATGGTGGTGAGGACTTCGTCTTCTCCCTGCTCAC < 41bp 0.717679193809159 0.515620128718305 0.017333895 0.030748457 prediction 0.404118130181708 Functional Loss - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151502 chr8:145151504 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_97129 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145151484-145151527
64251 chr20 16712882 16712882 1 + G A LUSC 16712879 + 16712859 16712899 41 GACATTGTGGCTTTAAAGACCATGAAGATGAGGGGGCAGGC GACATTGTGGCTTTAAAGACCATAAAGATGAGGGGGCAGGC < 41bp 0.778915748573618 0.576858201703664 0.08762458 0.056546956 prediction 0.404115093739907 Functional Loss - SNRPB2 ENSG00000125870 CDS Human protein_coding chr20:16712879 chr20:16712882 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97130 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:16712873-16712904
64251 chr2 27656302 27656302 1 + G T UCEC 27656298 + 27656278 27656318 41 AGAAGAAAGTGAAGATGAGTCTGAGATTTTGGAAGAGTCGC AGAAGAAAGTGAAGATGAGTCTGATATTTTGGAAGAGTCGC < 41bp 0.702055269806439 0.499036696274276 0.14974365 0.13732213 prediction 0.404110539612879 Functional Loss - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27656298 chr2:27656302 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_97133 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr2:27656277-27656322
64251 chr17 72436494 72436494 1 + C T rs143368410 72436491 + 72436471 72436511 41 GGCGGCCCTCAGGGCAACAGCAGCGCAGGCTGGGCCGTGGC GGCGGCCCTCAGGGCAACAGCAGTGCAGGCTGGGCCGTGGC < 41bp 0.728159120446933 0.526110761952847 0.6983155 0.47247297 prediction 0.404096716988173 Functional Loss - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436491 chr17:72436494 synonymous SNV . 0 24 hm5C_associated_SNPs_97137 0 0 2 RPS3 POSTAR2 ENCODE chr17:72436457-72436499
64251 chr6 44371690 44371690 1 + T C rs11571943 44371689 + 44371669 44371709 41 CCTTGGTTTTTATGATACTTCTGAGGAAAACTACCAAGCTC CCTTGGTTTTTATGATACTTCCGAGGAAAACTACCAAGCTC < 41bp 0.702029304332259 0.461441333859567 0.15423074 0.33436316 prediction 0.404058608664519 Functional Loss - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44371689 chr6:44371690 synonymous SNV . 0 22 hm5C_associated_SNPs_97153 0 0 21 CSTF2 POSTAR2 GSE40859,GSM1003588 chr6:44371671-44371692
64251 chr19 44514981 44514981 1 + G T LUSC 44514978 + 44514958 44514998 41 AATGTGGGAGGGCCTTCATTCACGATTTCCAGCTTCAGAAA AATGTGGGAGGGCCTTCATTCACTATTTCCAGCTTCAGAAA < 41bp 0.932334938049089 0.730306331973874 0.27907884 0.10327172 prediction 0.404057212150429 Functional Loss - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514978 chr19:44514981 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_97155 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:44514961-44514989
64251 chr12 56365979 56365979 1 + G A rs2069415 56365976 + 56365956 56365996 41 CTGGGAGACTGAAGACTCAGCCCGGGTGGGGCTGCAGAAAA CTGGGAGACTGAAGACTCAGCCCAGGTGGGGCTGCAGAAAA < 41bp 0.820724569642695 0.61869868149459 0.40892014 0.20995447 prediction 0.404051776296211 Functional Loss - CDK2 ENSG00000123374 UTR3 Human protein_coding chr12:56365976 chr12:56365979 . . 0 24 hm5C_associated_SNPs_97156 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56365887-56366121
64251 chr19 5828164 5828164 1 + C T MESO 5828162 + 5828142 5828182 41 CACGGTGCACGAGCTGTCGGCGCGCGAGTGCGCCTGCGTGT CACGGTGCACGAGCTGTCGGCGTGCGAGTGCGCCTGCGTGT < 41bp 0.793011231774199 0.590986705864717 0.6269507 0.6867425 prediction 0.404049051818964 Functional Loss - NRTN ENSG00000171119 CDS Human protein_coding chr19:5828162 chr19:5828164 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_97162 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:5828152-5828174
64251 chr7 99720112 99720112 1 + G T UCEC 99720109 + 99720089 99720129 41 CCTCTCTTTCCACAGAGAGACAAGGCTGGAAGAGGCCTTAG CCTCTCTTTCCACAGAGAGACAATGCTGGAAGAGGCCTTAG < 41bp 0.702022004685257 0.297341280641819 0.37718108 0.5500023 prediction 0.404044009370514 Functional Loss - CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99720109 chr7:99720112 nonsynonymous SNV 0.756 4 24 hm5C_associated_SNPs_97164 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:99720109-99720135
64251 chr2 241569759 241569759 1 + C T LUAD 241569757 + 241569737 241569777 41 GTGCCCGCGGGCTGCGGTCCCCCAGGCAGGCTGCGGCCGTG GTGCCCGCGGGCTGCGGTCCCCTAGGCAGGCTGCGGCCGTG < 41bp 0.807039901738575 0.605018934821053 0.1643146 0.13055721 prediction 0.404041933835043 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569757 chr2:241569759 synonymous SNV . 0 23 hm5C_associated_SNPs_97168 0 0 2 DDX3X POSTAR2 ENCODE chr2:241569712-241569762
64251 chr5 75991296 75991296 1 + G A HNSC 75991293 + 75991273 75991313 41 TTTCAGGAGGTAGACCATGCCACGGACATGGTGAGCCGTGC TTTCAGGAGGTAGACCATGCCACAGACATGGTGAGCCGTGC < 41bp 0.702020032667085 0.482032048834522 0.232672 0.113363296 prediction 0.40404006533417 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75991293 chr5:75991296 synonymous SNV . 0 24 hm5C_associated_SNPs_97169 0 0 2 BUD13 POSTAR2 ENCODE chr5:75991277-75991308
64251 chr2 110373228 110373228 1 + G C HNSC 110373224 + 110373204 110373244 41 CAGTACCTGAGTCGGAGCATCGCCGAGGAGATCAAGAACCT CAGTACCTGAGTCGGAGCATCGCCCAGGAGATCAAGAACCT < 41bp 0.70201412066557 0.411871613703261 0.4746598 0.057397068 prediction 0.40402824133114 Functional Loss - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373224 chr2:110373228 nonsynonymous SNV 0.843 1 25 hm5C_associated_SNPs_97178 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:110373206-110373229
64251 chr20 44574459 44574459 1 + C T rs41450546 44574456 + 44574436 44574476 41 GTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTA GTGGAGATGCACATGGAGAACAATGTGGTCTGCATCCGGTA < 41bp 0.723649892798553 0.521644662596699 0.11458862 0.18045783 prediction 0.404010460403707 Functional Loss - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44574456 chr20:44574459 synonymous SNV . 0 24 hm5C_associated_SNPs_97184 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr20:44574448-44574474
64251 chr12 122614518 122614518 1 + G T SARC 122614515 + 122614495 122614535 41 ACATGCTGTATTGGCACAAGCACGGGGATGGATGGAAGACC ACATGCTGTATTGGCACAAGCACTGGGATGGATGGAAGACC < 41bp 0.702004237044175 0.288560672947271 0.6733075 0.2368989 prediction 0.40400847408835 Functional Loss - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122614515 chr12:122614518 nonsynonymous SNV 0.477 3 24 hm5C_associated_SNPs_97185 0 0 6 BUD13 POSTAR2 ENCODE chr12:122614485-122614545
64251 chr19 42791718 42791718 1 + C T LGG 42791715 + 42791695 42791735 41 AGCGGGAGAAGGACCACATCCGGCGGCCCATGAATGCCTTC AGCGGGAGAAGGACCACATCCGGTGGCCCATGAATGCCTTC < 41bp 0.73197895211221 0.529975957070366 0.43389684 0.21848297 prediction 0.404005990083688 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791715 chr19:42791718 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_97186 0 0 1 PPIG POSTAR2 ENCODE chr19:42791696-42791730
64251 chr12 123346539 123346539 1 + G A rs564392881 123346536 + 123346516 123346556 41 AAGGAACTTTGGGGTGCAGCCAGGACCCGGTAGGCCTGAGC AAGGAACTTTGGGGTGCAGCCAGAACCCGGTAGGCCTGAGC < 41bp 0.702001845149301 0.46611773667533 0.7607962 0.5014019 prediction 0.404003690298602 Functional Loss - HIP1R ENSG00000130787 UTR3 Human protein_coding chr12:123346536 chr12:123346539 . . 0 24 hm5C_associated_SNPs_97188 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:123346534-123346569
64251 chr19 47858387 47858387 1 + G T THCA 47858383 + 47858363 47858403 41 GGCTGCTCCTGCGACAAATCCAGCGGGAACCCAGCCTGCCC GGCTGCTCCTGCGACAAATCCAGCTGGAACCCAGCCTGCCC < 41bp 0.750255331536451 0.548262911629996 0.89825106 0.8593461 prediction 0.40398483981291 Functional Loss - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858383 chr19:47858387 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_97191 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:47858375-47858400
64251 chr7 148481142 148481142 1 + G A UCEC 148481139 + 148481119 148481159 41 TAAATCCCCTGAGTTGCTGGCTCGATACTGTGACTCCTTGT TAAATCCCCTGAGTTGCTGGCTCAATACTGTGACTCCTTGT < 41bp 0.701991313948115 0.461581192106955 0.4081992 0.90116465 prediction 0.403982627896231 Functional Loss - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148481139 chr7:148481142 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_97192 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:148481142-148481169
64251 chr17 46628488 46628488 1 + G A PRAD 46628485 + 46628465 46628505 41 CCGCCGCCGCCGCCACCGCCCCCGCTGCCACCACTGCCTCC CCGCCGCCGCCGCCACCGCCCCCACTGCCACCACTGCCTCC < 41bp 0.701986029544812 0.457052057391892 0.16695026 0.082395405 prediction 0.403972059089625 Functional Loss - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628485 chr17:46628488 synonymous SNV . 0 24 hm5C_associated_SNPs_97195 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chr1 1421171 1421171 1 + C T STAD 1421168 + 1421148 1421188 41 TTCCCCTCCGGCAGGTCAGCCGGCGGCTCCTCAGTCGACCC TTCCCCTCCGGCAGGTCAGCCGGTGGCTCCTCAGTCGACCC < 41bp 0.737110656409373 0.535125072225161 0.91184735 0.9080068 prediction 0.403971168368424 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421168 chr1:1421171 nonsynonymous SNV 0.115 5 24 hm5C_associated_SNPs_97197 0 0 4 BUD13 POSTAR2 ENCODE chr1:1421159-1421191
64251 chr5 75954427 75954427 1 + G A SKCM 75954424 + 75954404 75954444 41 AGATCAGGGCCAATCAACAGCTGGAAAAAGACCTGAACCTG AGATCAGGGCCAATCAACAGCTGAAAAAAGACCTGAACCTG < 41bp 0.765385084368099 0.563399624995103 0.18612853 0.37770104 prediction 0.403970918745993 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75954424 chr5:75954427 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_97198 0 0 1 UCHL5 POSTAR2 ENCODE chr5:75954411-75954478
64251 chr5 180661772 180661772 1 + T C BRCA 180661771 + 180661751 180661791 41 CACCCGCATCAAGCTCTGCCCTTGATTATCCTGCCACCCGC CACCCGCATCAAGCTCTGCCCCTGATTATCCTGCCACCCGC < 41bp 0.709144024145886 0.507159766951954 0.13384396 0.14093304 prediction 0.403968514387864 Functional Loss - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180661771 chr5:180661772 synonymous SNV . 0 22 hm5C_associated_SNPs_97199 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:180661744-180661779
64251 chr4 139964292 139964292 1 + C T UCEC 139964289 + 139964269 139964309 41 CTCGCCAAGACACTGAACAGCAGCGCTGCCTCCCAGCACCC CTCGCCAAGACACTGAACAGCAGTGCTGCCTCCCAGCACCC < 41bp 0.733871533896359 0.531888092282278 0.27153918 0.27641594 prediction 0.403966883228161 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139964289 chr4:139964292 synonymous SNV . 0 24 hm5C_associated_SNPs_97200 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:139964272-139964311
64251 chr16 89300313 89300313 1 + G A rs182226774 89300310 + 89300290 89300330 41 TCTCCTCCCTGAAGTCAGCCCAGGATGAGGCACTAGACAGC TCTCCTCCCTGAAGTCAGCCCAGAATGAGGCACTAGACAGC < 41bp 0.81213686356664 0.610154032001795 0.40559363 0.13978437 prediction 0.403965663129689 Functional Loss - ZNF778;ANKRD11 ENSG00000170100;ENSG00000260637 intergenic Human other chr16:89300310 chr16:89300313 . . 0 24 hm5C_associated_SNPs_97201 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:89300285-89300316
64251 chr5 169127112 169127112 1 + G A SKCM 169127109 + 169127089 169127129 41 GACAGGACCACCGTGGTGGCCAGGAAGCTGGGATTCCCAGA GACAGGACCACCGTGGTGGCCAGAAAGCTGGGATTCCCAGA < 41bp 0.742587583036991 0.540607768356574 0.562837 0.5387048 prediction 0.403959629360835 Functional Loss - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169127109 chr5:169127112 synonymous SNV . 0 24 hm5C_associated_SNPs_97209 0 0 5 DDX24 POSTAR2 ENCODE chr5:169127072-169127141
64251 chr14 101531693 101531693 1 + C T STAD 101531691 + 101531671 101531711 41 CATCTGGACGACGAATGTTGCTCGGTGAACCCCTTTTCGGT CATCTGGACGACGAATGTTGCTTGGTGAACCCCTTTTCGGT < 41bp 0.752884736336125 0.550912038505813 0.18684098 0.13069656 prediction 0.403945395660625 Functional Loss - MIR409 ENSG00000199107 ncRNA_exonic Human miRNA chr14:101531691 chr14:101531693 . . 0 23 hm5C_associated_SNPs_97212 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101531680-101531700
64251 chr12 22796922 22796922 1 + G A BRCA 22796919 + 22796899 22796939 41 AATTTATACAAGGAGAAGCACTGGATCCAAAGCATGTCTGC AATTTATACAAGGAGAAGCACTGAATCCAAAGCATGTCTGC < 41bp 0.792995611607448 0.591023911385764 0.34058794 0.13876677 prediction 0.403943400443367 Functional Loss - ETNK1 ENSG00000139163 CDS Human protein_coding chr12:22796919 chr12:22796922 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_97213 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:22796832-22796938
64251 chr2 234107008 234107008 1 + G T LUSC 234107005 + 234106985 234107025 41 GCAAACCGGGGTCTCCCTCCCAGGACACAGGAGTCAAGGTG GCAAACCGGGGTCTCCCTCCCAGTACACAGGAGTCAAGGTG < 41bp 0.701967496278829 0.308596441643089 0.6439502 0.15801373 prediction 0.403934992557657 Functional Loss - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234107005 chr2:234107008 nonsynonymous SNV 0.021 2 24 hm5C_associated_SNPs_97216 0 0 3 DDX55 POSTAR2 ENCODE chr2:234106970-234107020
64251 chr22 24124579 24124579 1 + C T COAD 24124576 + 24124556 24124596 41 GACTACTGGCGTTTCCACCCCAGCACCCGGCGTGTAGACAG GACTACTGGCGTTTCCACCCCAGTACCCGGCGTGTAGACAG < 41bp 0.774219302003199 0.572255153247777 0.1329352 0.16307381 prediction 0.403928297510844 Functional Loss - MMP11 ENSG00000099953;ENSG00000267954 CDS Human other chr22:24124576 chr22:24124579 nonsynonymous SNV 0.295 0 24 hm5C_associated_SNPs_97219 0 0 1 SND1 POSTAR2 ENCODE chr22:24124533-24124645
64251 chr10 17750825 17750825 1 + G A UCEC 17750822 + 17750802 17750842 41 GCCTACCTGGTTGCAGGGAACGCGCAGATGAGCCACCTCCA GCCTACCTGGTTGCAGGGAACGCACAGATGAGCCACCTCCA < 41bp 0.820282595191193 0.618337992103897 0.7363924 0.29880735 prediction 0.403889206174593 Functional Loss - STAM ENSG00000136738 CDS Human protein_coding chr10:17750822 chr10:17750825 synonymous SNV . 0 24 hm5C_associated_SNPs_97228 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr10:17750778-17750826
64251 chr11 130005535 130005535 1 + G A GBM 130005532 + 130005512 130005552 41 CAGAGACCCCTGTGGACGTCCGGGTGAGCTCTGAGGAGAGT CAGAGACCCCTGTGGACGTCCGGATGAGCTCTGAGGAGAGT < 41bp 0.701936190198014 0.459024019519349 0.82791173 0.5236258 prediction 0.403872380396029 Functional Loss - APLP2 ENSG00000084234 CDS Human protein_coding chr11:130005532 chr11:130005535 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97230 0 0 24 TARDBP POSTAR2 DRA001158,DRS012386 chr11:130005512-130005544
64251 chr16 90108917 90108917 1 + C T UCEC 90108914 + 90108894 90108934 41 AGAACAGCACCATCAAGGACCTGCAGTATGAGCTGGCCCAG AGAACAGCACCATCAAGGACCTGTAGTATGAGCTGGCCCAG < 41bp 0.792429563595033 0.590494574287237 0.14950457 0.19906172 prediction 0.403869978615592 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90108914 chr16:90108917 stopgain 0.998 1 24 hm5C_associated_SNPs_97231 0 0 2 BUD13 POSTAR2 ENCODE chr16:90108870-90108950
64251 chr5 60448749 60448749 1 + G T UCEC 60448746 + 60448726 60448766 41 AAAACCTTTCAGCCAGGATCCTGGATGCCACGAGATGGCAA AAAACCTTTCAGCCAGGATCCTGTATGCCACGAGATGGCAA < 41bp 0.929246418412593 0.7273117358887 0.13882914 0.122211784 prediction 0.403869365047786 Functional Loss - NDUFAF2 ENSG00000164182 CDS Human protein_coding chr5:60448746 chr5:60448749 nonsynonymous SNV 0.759 4 24 hm5C_associated_SNPs_97232 0 0 1 LARP4 POSTAR2 ENCODE chr5:60448657-60448773
64251 chr5 96271832 96271832 1 + G C rs543713716 96271828 + 96271808 96271848 41 CGGAGTAGGAAGCTCGGGCGCTCCGGCTGTAAGGAGCCGCG CGGAGTAGGAAGCTCGGGCGCTCCCGCTGTAAGGAGCCGCG < 41bp 0.719382508901312 0.51744870095119 0.5825138 0.5098972 prediction 0.403867615900244 Functional Loss - LNPEP ENSG00000113441 UTR5 Human protein_coding chr5:96271828 chr5:96271832 . . 0 25 hm5C_associated_SNPs_97233 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:96271800-96271840
64251 chr3 42633038 42633038 1 + C T UCEC 42633035 + 42633015 42633055 41 AGCTCCTTGAGGAGAATGACCAGCTGATCCGCTGTATTGTG AGCTCCTTGAGGAGAATGACCAGTTGATCCGCTGTATTGTG < 41bp 0.734170926953158 0.532238489048331 0.8960327 0.83184254 prediction 0.403864875809654 Functional Loss - SS18L2 ENSG00000008324 CDS Human protein_coding chr3:42633035 chr3:42633038 synonymous SNV . 0 24 hm5C_associated_SNPs_97236 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr3:42633023-42633046
64251 chr12 53584367 53584367 1 + G C rs185070238 53584363 + 53584343 53584383 41 GTTACATTAGTGGAGTCCGCCACAGCTTCGAACCCTCTCCC GTTACATTAGTGGAGTCCGCCACACCTTCGAACCCTCTCCC < 41bp 0.701929859998871 0.451702686615935 0.16400224 0.18937725 prediction 0.403859719997742 Functional Loss - ZNF740 ENSG00000139651 UTR3 Human protein_coding chr12:53584363 chr12:53584367 . . 0 25 hm5C_associated_SNPs_97238 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:53584291-53584378
64251 chr22 37962646 37962646 1 + G A rs139353065 37962643 + 37962623 37962663 41 GCGGAGGGTGGGGGCGCCCCCCCGGAGGATGGCATCTCCCC GCGGAGGGTGGGGGCGCCCCCCCAGAGGATGGCATCTCCCC < 41bp 0.824955355631713 0.623028806036561 0.5362981 0.31517416 prediction 0.403853099190304 Functional Loss - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962643 chr22:37962646 nonsynonymous SNV 0.287 1 24 hm5C_associated_SNPs_97242 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37962640-37962660
64251 chr16 3367772 3367772 1 + G T UCEC 3367768 + 3367748 3367788 41 ACTCCCACCTTATTAAACACCGGAGAACCCACACAGGTGAG ACTCCCACCTTATTAAACACCGGATAACCCACACAGGTGAG < 41bp 0.701921847821882 0.49486966975685 0.34503812 0.16500098 prediction 0.403843695643764 Functional Loss - ZNF75A ENSG00000162086 CDS Human protein_coding chr16:3367768 chr16:3367772 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_97247 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3367730-3367782
64251 chr12 100606103 100606103 1 + G T STAD 100606101 + 100606081 100606121 41 AAGATGTATGCTATGTGTCTCAGGATTTTTATAGAGACATG AAGATGTATGCTATGTGTCTCATGATTTTTATAGAGACATG < 41bp 0.701921193422827 0.37508317452634 0.87625396 0.36554328 prediction 0.403842386845653 Functional Loss - ACTR6 ENSG00000075089 CDS Human protein_coding chr12:100606101 chr12:100606103 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_97249 0 0 4 FASTKD2 POSTAR2 ENCODE chr12:100606062-100606133
64251 chr20 61288448 61288448 1 + G T LUAD 61288445 + 61288425 61288465 41 ACGTGCCCTGCCAACCCCGGCGCGGTGTGTGCGGACAGCAC ACGTGCCCTGCCAACCCCGGCGCTGTGTGTGCGGACAGCAC < 41bp 0.701917854462456 0.295119067881373 0.8905675 0.6849977 prediction 0.403835708924912 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61288445 chr20:61288448 synonymous SNV . 0 24 hm5C_associated_SNPs_97250 0 0 4 NOL12 POSTAR2 ENCODE chr20:61288425-61288463
64251 chr12 32137352 32137352 1 + G T LUAD 32137350 + 32137330 32137370 41 TGACCTGCAGGCACCTGCAGCTGGACAAAGTCGTGATTCTG TGACCTGCAGGCACCTGCAGCTTGACAAAGTCGTGATTCTG < 41bp 0.701917530070274 0.381176776520169 0.23617724 0.047411174 prediction 0.403835060140548 Functional Loss - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32137350 chr12:32137352 stopgain 0.002 0 23 hm5C_associated_SNPs_97251 0 0 2 LARP4 POSTAR2 ENCODE chr12:32137315-32137353
64251 chr7 73790832 73790832 1 + C T STAD 73790829 + 73790809 73790849 41 AGGAGGAGCTGGCTGGGCTGCAGCGGCACTGGCGGGCCCAG AGGAGGAGCTGGCTGGGCTGCAGTGGCACTGGCGGGCCCAG < 41bp 0.710758744739059 0.508842408089787 0.8808684 0.8294134 prediction 0.403832673298543 Functional Loss - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73790829 chr7:73790832 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_97252 0 0 2 GRWD1 POSTAR2 ENCODE chr7:73790763-73790872
64251 chr6 116953397 116953397 1 + G A UCEC 116953394 + 116953374 116953414 41 TTTGAAAATTTCTACATAGGCTGGGGTCATAAGTATAGTCC TTTGAAAATTTCTACATAGGCTGAGGTCATAAGTATAGTCC < 41bp 0.780140661981477 0.57822681788922 0.23725694 0.056301355 prediction 0.403827688184514 Functional Loss - RSPH4A ENSG00000111834 CDS Human protein_coding chr6:116953394 chr6:116953397 stopgain 1.000 1 24 hm5C_associated_SNPs_97254 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chr6:116953377-116953406
64251 chr9 116930093 116930093 1 + G A rs79824663 116930090 + 116930070 116930110 41 CGGGCCCGGCTCCAGGCTCCCACGGGCACCGTCATTCCTGC CGGGCCCGGCTCCAGGCTCCCACAGGCACCGTCATTCCTGC < 41bp 0.809392716447661 0.607479541087726 0.64491296 0.22303453 prediction 0.40382635071987 Functional Loss - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116930090 chr9:116930093 synonymous SNV . 0 24 hm5C_associated_SNPs_97256 0 0 5 BUD13 POSTAR2 ENCODE chr9:116930066-116930096
64251 chr11 47594984 47594984 1 + C T UCEC 47594982 + 47594962 47595002 41 TGTCCACACATTATCACCTACGCGATAATAAATGACTGCGT TGTCCACACATTATCACCTACGTGATAATAAATGACTGCGT < 41bp 0.755066992932163 0.553155242121326 0.9047748 0.4161877 prediction 0.403823501621674 Functional Loss - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594982 chr11:47594984 nonsynonymous SNV 0.982 2 23 hm5C_associated_SNPs_97257 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:47594976-47595029
64251 chr15 67835097 67835097 1 + A C rs8036625 67835093 + 67835073 67835113 41 GTCGCCGCCGCCGCAGCCGCCGCCAGTCCGCGCGGCCTCGG GTCGCCGCCGCCGCAGCCGCCGCCCGTCCGCGCGGCCTCGG < 41bp 0.931524742351744 0.72961324375424 0.50991696 0.15420496 prediction 0.403822997195008 Functional Loss - MAP2K5 ENSG00000137764 UTR5 Human protein_coding chr15:67835093 chr15:67835097 . . 0 25 hm5C_associated_SNPs_97259 0 0 4 DDX3X POSTAR2 ENCODE chr15:67835086-67835156
64251 chr3 9948721 9948721 1 + C T UCEC 9948718 + 9948698 9948738 41 ATATCTTCAGGCCCTGAGGTCAGCGTGCGTCTTTGTCACCA ATATCTTCAGGCCCTGAGGTCAGTGTGCGTCTTTGTCACCA < 41bp 0.701907042910502 0.490785526575114 0.87738466 0.56505865 prediction 0.403814085821005 Functional Loss - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9948718 chr3:9948721 synonymous SNV . 0 24 hm5C_associated_SNPs_97261 0 0 1 GRWD1 POSTAR2 ENCODE chr3:9948642-9948766
64251 chr15 25451265 25451265 1 + G A SKCM 25451262 + 25451242 25451282 41 CAGAGGAAGACCCCGTGGCTCTGGGCCAGTGTGCGTCAGCC CAGAGGAAGACCCCGTGGCTCTGAGCCAGTGTGCGTCAGCC < 41bp 0.796447440965074 0.594542194585367 0.7161917 0.48576936 prediction 0.403810492759414 Functional Loss - SNHG14 ENSG00000224078 ncRNA_exonic Human processed_transcript chr15:25451262 chr15:25451265 . . 0 24 hm5C_associated_SNPs_97262 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:25451260-25451280
64251 chr20 18505080 18505080 1 + G T LUSC 18505077 + 18505057 18505097 41 CTGTTTTTCTTTGCCCAAAGCGAGGTGCTCAGTCCCCTCTG CTGTTTTTCTTTGCCCAAAGCGATGTGCTCAGTCCCCTCTG < 41bp 0.70190339427618 0.295201836735697 0.951235 0.5324965 prediction 0.40380678855236 Functional Loss - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18505077 chr20:18505080 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_97265 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917669 chr20:18505076-18505097
64251 chr3 69986987 69986987 1 + C T COAD 69986985 + 69986965 69987005 41 ATGTTCAGGTGCAGACCCACCTCGAAAACCCCACCAAGTAC ATGTTCAGGTGCAGACCCACCTTGAAAACCCCACCAAGTAC < 41bp 0.883526209084988 0.68163610752881 0.9489318 0.2479294 prediction 0.403780203112357 Functional Loss - MITF ENSG00000187098 CDS Human protein_coding chr3:69986985 chr3:69986987 synonymous SNV . 0 23 hm5C_associated_SNPs_97271 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:69986984-69987168
64251 chr11 63986763 63986763 1 + G A STAD 63986760 + 63986740 63986780 41 GACACAGCTGTATGAGCAGGCCCGGTGGGACCTGCTGCTGG GACACAGCTGTATGAGCAGGCCCAGTGGGACCTGCTGCTGG < 41bp 0.701887420095038 0.455402707186015 0.2910141 0.38824642 prediction 0.403774840190076 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63986760 chr11:63986763 nonsynonymous SNV 0.968 4 24 hm5C_associated_SNPs_97274 0 0 2 FMR1 POSTAR2 ENCODE chr11:63986727-63986787
64251 chr17 56833469 56833469 1 + C T STAD 56833467 + 56833447 56833487 41 AGCCGGAGCCGGAACCCGAACCCGAACCCGAACCCGAACCC AGCCGGAGCCGGAACCCGAACCTGAACCCGAACCCGAACCC < 41bp 0.844045628742054 0.642158969720192 0.3305708 0.30358702 prediction 0.403773318043723 Functional Loss - PPM1E ENSG00000175175 CDS Human protein_coding chr17:56833467 chr17:56833469 synonymous SNV . 0 23 hm5C_associated_SNPs_97275 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:56833465-56833492
64251 chr12 104337556 104337556 1 + C T UCEC 104337553 + 104337533 104337573 41 GTCTCAGCGCCTGACAGAATCTCCGTGTGCTTTGGTGGCCA GTCTCAGCGCCTGACAGAATCTCTGTGTGCTTTGGTGGCCA < 41bp 0.80981951186089 0.607933541725361 0.86457837 0.20576224 prediction 0.403771940271056 Functional Loss - HSP90B1 ENSG00000166598 CDS Human protein_coding chr12:104337553 chr12:104337556 nonsynonymous SNV 0.918 4 24 hm5C_associated_SNPs_97276 0 0 39 FMR1 POSTAR2 GSE39682,GSM977615 chr12:104337515-104337561
64251 chr3 159944664 159944664 1 + C T rs528757511 159944662 + 159944642 159944682 41 GCCGCGACCAGGGACTGCTGCACGTGGGTGTGGGAGAGCGC GCCGCGACCAGGGACTGCTGCATGTGGGTGTGGGAGAGCGC < 41bp 0.763308099777331 0.561423106375475 0.2271764 0.24469349 prediction 0.403769986803712 Functional Loss - C3orf80 ENSG00000244078 ncRNA_intronic Human other chr3:159944662 chr3:159944664 . . 0 23 hm5C_associated_SNPs_97277 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:159944632-159944689
64251 chr3 158015851 158015851 1 + G A CESC 158015848 + 158015828 158015868 41 GGAATCTGGAAACATCAAAGCTGGATTAGAACATCTGGTAA GGAATCTGGAAACATCAAAGCTGAATTAGAACATCTGGTAA < 41bp 0.714686508018244 0.512807761604668 0.25683415 0.124234825 prediction 0.40375749282715 Functional Loss - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:158015848 chr3:158015851 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97282 0 0 11 BUD13 POSTAR2 ENCODE chr3:158015823-158015865
64251 chr4 89628552 89628552 1 + C T rs566776577 89628549 + 89628529 89628569 41 ACTGACCTGTCCTTTTTTATCTGCGCATGCGAGAACATCAC ACTGACCTGTCCTTTTTTATCTGTGCATGCGAGAACATCAC < 41bp 0.709126364528257 0.507250155676687 0.23181471 0.09126413 prediction 0.403752417703141 Functional Loss - HERC3 ENSG00000138641 UTR3 Human protein_coding chr4:89628549 chr4:89628552 . . 0 24 hm5C_associated_SNPs_97283 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:89628522-89628563
64251 chr11 47183076 47183076 1 + C T STAD 47183073 + 47183053 47183093 41 CCAGTCCAGAGGCCAGTTGCCTGCCTTCCCGGACCCCTCCC CCAGTCCAGAGGCCAGTTGCCTGTCTTCCCGGACCCCTCCC < 41bp 0.70763398898297 0.505760142620481 0.21702969 0.06537059 prediction 0.403747692724979 Functional Loss - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47183073 chr11:47183076 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_97287 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47183072-47183131
64251 chr2 187466848 187466848 1 + C T STAD 187466845 + 187466825 187466865 41 AATGTGACTGGTCTTCTACCCGCCGGTGCCAGCCAATTGAA AATGTGACTGGTCTTCTACCCGCTGGTGCCAGCCAATTGAA < 41bp 0.761202487155444 0.559331371049033 0.10572258 0.27429727 prediction 0.403742232212823 Functional Loss - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187466845 chr2:187466848 nonsynonymous SNV 0.933 1 24 hm5C_associated_SNPs_97288 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr2:187466826-187466857
64251 chr19 52794420 52794420 1 + G T UCEC 52794416 + 52794396 52794436 41 GTTCATGGTTTGTACAGCATCAGAGAAGTGTTCATGAGAGA GTTCATGGTTTGTACAGCATCAGATAAGTGTTCATGAGAGA < 41bp 0.717770404845364 0.515899989328245 0.80656815 0.43075162 prediction 0.403740831034238 Functional Loss - ZNF766 ENSG00000196214 CDS Human protein_coding chr19:52794416 chr19:52794420 nonsynonymous SNV 0.011 1 25 hm5C_associated_SNPs_97290 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:52794418-52794442
64251 chr8 128752935 128752935 1 + G C LUAD 128752931 + 128752911 128752951 41 ACCAGCCCCAGGTCCTCGGACACCGAGGAGAATGTCAAGAG ACCAGCCCCAGGTCCTCGGACACCCAGGAGAATGTCAAGAG < 41bp 0.70187025466578 0.412567919720485 0.5499063 0.1942682 prediction 0.40374050933156 Functional Loss - MYC ENSG00000136997 CDS Human protein_coding chr8:128752931 chr8:128752935 nonsynonymous SNV 0.987 5 25 hm5C_associated_SNPs_97291 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:128752920-128752940
64251 chr18 12325292 12325292 1 + C T UCEC 12325289 + 12325269 12325309 41 GACCGCATCATGAACACCTTCAGCGTCATGCCCTCGCCCAA GACCGCATCATGAACACCTTCAGTGTCATGCCCTCGCCCAA < 41bp 0.701869832511155 0.498267746726825 0.1892891 0.13442022 prediction 0.40373966502231 Functional Loss - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325289 chr18:12325292 synonymous SNV . 0 24 hm5C_associated_SNPs_97292 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:12325259-12325321
64251 chr1 231475572 231475572 1 + C T UCEC 231475569 + 231475549 231475589 41 GGAATGTGTTCCATCCGTCTCAGCGAACCCCTTTTGAAGTT GGAATGTGTTCCATCCGTCTCAGTGAACCCCTTTTGAAGTT < 41bp 0.753116176127738 0.551247174766612 0.3793904 0.18223 prediction 0.403738002722252 Functional Loss - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231475569 chr1:231475572 synonymous SNV . 0 24 hm5C_associated_SNPs_97293 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231475524-231475598
64251 chr8 37914654 37914654 1 + G T HNSC 37914650 + 37914630 37914670 41 GATGGAGTGTCGGAACTCACCTGTGACCAAAACACCCCCAA GATGGAGTGTCGGAACTCACCTGTTACCAAAACACCCCCAA < 41bp 0.705886987732158 0.50401829699933 0.28403908 0.1499469 prediction 0.403737381465656 Functional Loss - EIF4EBP1 ENSG00000187840 CDS Human protein_coding chr8:37914650 chr8:37914654 synonymous SNV . 0 25 hm5C_associated_SNPs_97294 0 0 22 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:37914654-37914677
64251 chr7 883027 883027 1 + C T UCEC 883024 + 883004 883044 41 AACGGGGATGTGGGAGCCGCCGCCGCCACCGCGCACAACGG AACGGGGATGTGGGAGCCGCCGCTGCCACCGCGCACAACGG < 41bp 0.729780336825448 0.527913092721804 0.8992772 0.8781787 prediction 0.403734488207289 Functional Loss - SUN1 ENSG00000164828 CDS Human protein_coding chr7:883024 chr7:883027 synonymous SNV . 0 24 hm5C_associated_SNPs_97297 0 0 8 CDC40 POSTAR2 ENCODE chr7:882984-883048
64251 chr1 43828733 43828733 1 + C T STAD 43828730 + 43828710 43828750 41 GCGCTGTTTTGAGTTGGACCCTGCGCGGCGGCGGGAGCGGG GCGCTGTTTTGAGTTGGACCCTGTGCGGCGGCGGGAGCGGG < 41bp 0.76003323298216 0.558169589076397 0.16195509 0.24459362 prediction 0.403727287811527 Functional Loss - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43828730 chr1:43828733 nonsynonymous SNV 0.501 0 24 hm5C_associated_SNPs_97298 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:43828685-43828735
64251 chr18 77794529 77794529 1 + C T HNSC 77794527 + 77794507 77794547 41 GGCGGGCGGGCTGTGGCGCTCCCGCGCGGGTCTCCGGGCCC GGCGGGCGGGCTGTGGCGCTCCTGCGCGGGTCTCCGGGCCC < 41bp 0.767086656569617 0.565225788046076 0.50449985 0.22937965 prediction 0.403721737047082 Functional Loss - RBFA ENSG00000101546;ENSG00000267127 CDS Human other chr18:77794527 chr18:77794529 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_97299 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:77794507-77794534
64251 chr5 176636892 176636892 1 + C T LUSC 176636890 + 176636870 176636910 41 GGAAAAGCCTTGCGCTAAATCTCGAGCCAGAAAGAGCTCTG GGAAAAGCCTTGCGCTAAATCTTGAGCCAGAAAGAGCTCTG < 41bp 0.701859971709612 0.414434844264287 0.15302658 0.045904726 prediction 0.403719943419224 Functional Loss - NSD1 ENSG00000165671 CDS Human protein_coding chr5:176636890 chr5:176636892 stopgain 0.991 0 23 hm5C_associated_SNPs_97302 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:176636867-176636893
64251 chr7 28844011 28844011 1 + C T HNSC 28844008 + 28843988 28844028 41 ACCAGCACCAGCACCCAGCACACCATCCTCACCCTCAACCC ACCAGCACCAGCACCCAGCACACTATCCTCACCCTCAACCC < 41bp 0.701859168000039 0.480242110720764 0.012118131 0.046788365 prediction 0.403718336000078 Functional Loss - CREB5 ENSG00000146592 CDS Human protein_coding chr7:28844008 chr7:28844011 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_97303 0 0 3 RBPMS POSTAR2 SRX484627 chr7:28844000-28844020
64251 chr7 107559523 107559523 1 + T C UCEC 107559522 + 107559502 107559542 41 AGCATCCTGTGAAGATATAGCTAGAGTCTGTCATGCACATC AGCATCCTGTGAAGATATAGCCAGAGTCTGTCATGCACATC < 41bp 0.828956022716927 0.627097286780714 0.075410515 0.33793366 prediction 0.403717471872427 Functional Loss - DLD ENSG00000091140 CDS Human protein_coding chr7:107559522 chr7:107559523 synonymous SNV . 0 22 hm5C_associated_SNPs_97304 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:107559469-107559532
64251 chr2 220046857 220046857 1 + A T LUAD 220046855 + 220046835 220046875 41 AGGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACTCGG AGGCCGTCCTCAAGCTCTGTCATGGCAAGCCCTGGACTCGG < 41bp 0.701857648377274 0.489097175300801 0.8968381 0.6101271 prediction 0.403715296754549 Functional Loss - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220046855 chr2:220046857 nonsynonymous SNV 0.808 1 23 hm5C_associated_SNPs_97306 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220046834-220046884
64251 chr13 45841411 45841411 1 + G A OV 45841408 + 45841388 45841428 41 GAAAGAAGACGGAAAGCGAGCTCGAGCTGATAAACAACATG GAAAGAAGACGGAAAGCGAGCTCAAGCTGATAAACAACATG < 41bp 0.77037885098962 0.568524284934905 0.10629806 0.07963425 prediction 0.403709132109429 Functional Loss - GTF2F2 ENSG00000188342 CDS Human protein_coding chr13:45841408 chr13:45841411 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_97310 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:45841403-45841461
64251 chr12 93881283 93881283 1 + G A UCEC 93881280 + 93881260 93881300 41 GATTATTTTGTAGCCTATCCCTCGGCCAGATCCTGTGCATA GATTATTTTGTAGCCTATCCCTCAGCCAGATCCTGTGCATA < 41bp 0.701850653521133 0.472250747544109 0.13142025 0.07859665 prediction 0.403701307042265 Functional Loss - MRPL42 ENSG00000198015 CDS Human protein_coding chr12:93881280 chr12:93881283 nonsynonymous SNV 0.826 0 24 hm5C_associated_SNPs_97314 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:93881273-93881297
64251 chr7 152550608 152550608 1 + G A UCEC 152550605 + 152550585 152550625 41 CCTGTGGAGGTCCAGGTGGTCACGCATCACATGCAGCGCTA CCTGTGGAGGTCCAGGTGGTCACACATCACATGCAGCGCTA < 41bp 0.813403869216672 0.611564122132314 0.59199 0.30829898 prediction 0.403679494168715 Functional Loss - ACTR3B ENSG00000133627 CDS Human protein_coding chr7:152550605 chr7:152550608 synonymous SNV . 0 24 hm5C_associated_SNPs_97324 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:152550603-152550643
64251 chr9 131904747 131904747 1 + G T COAD 131904743 + 131904723 131904763 41 GATGAAGACTGGCCCATTTGCAGAGCACTCCAACCAGCTGT GATGAAGACTGGCCCATTTGCAGATCACTCCAACCAGCTGT < 41bp 0.739493971976589 0.537656133067542 0.85075176 0.3040982 prediction 0.403675677818094 Functional Loss - PTPA ENSG00000119383 CDS Human protein_coding chr9:131904743 chr9:131904747 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_97325 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr9:131904726-131904753
64251 chr5 14681660 14681660 1 + G A STAD 14681657 + 14681637 14681677 41 CACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTG CACTGAGGGCCACGCTGTTCCAGACCATGAGCCAGGCTGTG < 41bp 0.701836708451201 0.45742173027106 0.53258115 0.32028306 prediction 0.403673416902402 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14681657 chr5:14681660 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_97327 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:14681625-14681679
64251 chr6 26217388 26217388 1 + G C LUAD 26217384 + 26217364 26217404 41 GGTGCTGGAATATCTGACGGCCGAGATCTTAGAGCTAGCTG GGTGCTGGAATATCTGACGGCCGACATCTTAGAGCTAGCTG < 41bp 0.701832116260068 0.415840513899885 0.43471727 0.09963873 prediction 0.403664232520137 Functional Loss - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217384 chr6:26217388 nonsynonymous SNV 0.090 1 25 hm5C_associated_SNPs_97329 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26217359-26217397
64251 chr18 67992851 67992851 1 + C T rs542443702 67992848 + 67992828 67992868 41 TCCACTCTCACCATTGCTACCTCCAATGCAGAATAATCAAA TCCACTCTCACCATTGCTACCTCTAATGCAGAATAATCAAA < 41bp 0.701831218870689 0.46962802119821 0.9552885 0.9171204 prediction 0.403662437741379 Functional Loss - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992848 chr18:67992851 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97330 0 0 1 RBM22 POSTAR2 ENCODE chr18:67992772-67992871
64251 chr18 21594896 21594896 1 + G T SARC 21594894 + 21594874 21594914 41 CGACGGAGACTCGGACGCGGCAGCGGCGGCGGCGGCGCCCC CGACGGAGACTCGGACGCGGCATCGGCGGCGGCGGCGCCCC < 41bp 0.91907325517878 0.71724443973305 0.8992423 0.8806485 prediction 0.403657630891459 Functional Loss - TTC39C ENSG00000168234 CDS Human protein_coding chr18:21594894 chr18:21594896 nonsynonymous SNV 0.611 0 23 hm5C_associated_SNPs_97331 0 0 2 SRSF1 POSTAR2 ENCODE chr18:21594871-21594948
64251 chr1 32568247 32568247 1 + G T UCEC 32568244 + 32568224 32568264 41 TACTCATACTCTGCTAGCCCCCAGAGAGACCTGGACCACCG TACTCATACTCTGCTAGCCCCCATAGAGACCTGGACCACCG < 41bp 0.701823174590873 0.316971822330523 0.17996866 0.019282877 prediction 0.403646349181747 Functional Loss - TMEM39B ENSG00000121775 CDS Human protein_coding chr1:32568244 chr1:32568247 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_97334 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32568225-32568247
64251 chr20 48808680 48808680 1 + C T rs529249404 48808678 + 48808658 48808698 41 AGCGCCCGCGCCCGCGCCCTCGCCCCCGCCCCCGGCGGCGC AGCGCCCGCGCCCGCGCCCTCGTCCCCGCCCCCGGCGGCGC < 41bp 0.746228204210917 0.54440950387392 0.25579166 0.18531767 prediction 0.403637400673993 Functional Loss - CEBPB ENSG00000172216 UTR3 Human protein_coding chr20:48808678 chr20:48808680 . . 0 23 hm5C_associated_SNPs_97338 0 0 7 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr20:48808665-48808686
64251 chr14 99968607 99968607 1 + C T OV 99968605 + 99968585 99968625 41 TAGCAGTAGCAGTGATGTATCTCGCAGGACGTTTGTGCAAA TAGCAGTAGCAGTGATGTATCTTGCAGGACGTTTGTGCAAA < 41bp 0.701817213415895 0.398292172064027 0.07738191 0.061865836 prediction 0.40363442683179 Functional Loss - CCNK ENSG00000090061 CDS Human protein_coding chr14:99968605 chr14:99968607 synonymous SNV . 0 23 hm5C_associated_SNPs_97340 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:99968555-99968674
64251 chr5 14681611 14681611 1 + G T OV 14681609 + 14681589 14681629 41 CTCAGAAGTTCACCTCCATACGGCGAGTCCGTGGTGATAAT CTCAGAAGTTCACCTCCATACGTCGAGTCCGTGGTGATAAT < 41bp 0.701815916851119 0.358099773751247 0.16876614 0.053003043 prediction 0.403631833702238 Functional Loss - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14681609 chr5:14681611 synonymous SNV . 0 23 hm5C_associated_SNPs_97343 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:14681606-14681626
64251 chr5 148630930 148630930 1 + C T UCEC 148630927 + 148630907 148630947 41 CTGTCTCTTCTGCAGACACCCAGCGCAGACCTCTTCCACTA CTGTCTCTTCTGCAGACACCCAGTGCAGACCTCTTCCACTA < 41bp 0.740194688111748 0.538389092588987 0.059355527 0.08288866 prediction 0.403611191045523 Functional Loss - ABLIM3 ENSG00000173210 CDS Human protein_coding chr5:148630927 chr5:148630930 synonymous SNV . 0 24 hm5C_associated_SNPs_97348 0 0 1 EFTUD2 POSTAR2 ENCODE chr5:148630922-148631016
64251 chr3 9974647 9974647 1 + G A SKCM 9974644 + 9974624 9974664 41 TTTTCTCCGGCAGCGGCCGCCAGGGGCCGCGCGGCTCTGCT TTTTCTCCGGCAGCGGCCGCCAGAGGCCGCGCGGCTCTGCT < 41bp 0.7943424114607 0.592543650792839 0.94840425 0.9456371 prediction 0.403597521335721 Functional Loss - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9974644 chr3:9974647 synonymous SNV . 0 24 hm5C_associated_SNPs_97354 0 0 2 DDX24 POSTAR2 ENCODE chr3:9974637-9974660
64251 chr21 34922664 34922664 1 + C T UCEC 34922661 + 34922641 34922681 41 AGCGTTGGAGCTGCAGGAGTCGTCGGTGGCCTCAGCGATGG AGCGTTGGAGCTGCAGGAGTCGTTGGTGGCCTCAGCGATGG < 41bp 0.701797981848012 0.491229886874674 0.6751797 0.21935329 prediction 0.403595963696024 Functional Loss - SON ENSG00000159140 CDS Human protein_coding chr21:34922661 chr21:34922664 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_97355 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:34922225-34922670
64251 chr12 2994555 2994555 1 + G T LUSC 2994551 + 2994531 2994571 41 TGATGCCTCCCAGAAAAAAACGCCGCCAGCCTTCCCAGAAA TGATGCCTCCCAGAAAAAAACGCCTCCAGCCTTCCCAGAAA < 41bp 0.727096869362568 0.525299597739428 0.17329115 0.12791523 prediction 0.40359454324628 Functional Loss - RHNO1 ENSG00000171792 CDS Human protein_coding chr12:2994551 chr12:2994555 nonsynonymous SNV 0.628 0 25 hm5C_associated_SNPs_97356 0 0 1 DDX3X POSTAR2 ENCODE chr12:2994443-2994567
64251 chr15 75091700 75091700 1 + C T LUSC 75091697 + 75091677 75091717 41 CTGTTCCTGGTGCGGGAGAGCACCAACTACCCCGGAGACTA CTGTTCCTGGTGCGGGAGAGCACTAACTACCCCGGAGACTA < 41bp 0.761651610241599 0.559860697822116 0.5520996 0.35523048 prediction 0.403581824838966 Functional Loss - CSK ENSG00000103653 CDS Human protein_coding chr15:75091697 chr15:75091700 synonymous SNV . 0 24 hm5C_associated_SNPs_97361 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr15:75091696-75091721
64251 chr16 68597607 68597607 1 + G A SKCM 68597604 + 68597584 68597624 41 TCAGCATGAGAATGCTCATACCGGAGAGAAACCCTATCAGT TCAGCATGAGAATGCTCATACCGAAGAGAAACCCTATCAGT < 41bp 0.701786462131371 0.451948321139163 0.54180264 0.22210976 prediction 0.403572924262742 Functional Loss - ZFP90 ENSG00000184939 CDS Human protein_coding chr16:68597604 chr16:68597607 nonsynonymous SNV 0.927 3 24 hm5C_associated_SNPs_97363 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:68597595-68597621
64251 chr2 33246017 33246017 1 + C T HNSC 33246014 + 33245994 33246034 41 GTCAGAATGGAGGGATGTGTCTCCGGCCACAACTCTGTGTG GTCAGAATGGAGGGATGTGTCTCTGGCCACAACTCTGTGTG < 41bp 0.735308982201905 0.533523658790157 0.26466554 0.06509486 prediction 0.403570646823495 Functional Loss - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33246014 chr2:33246017 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_97365 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:33245980-33246018
64251 chrX 18912469 18912469 1 - G A LGG 18912471 - 18912451 18912491 41 ATGTCGAATCGGTGCTGAACCGCGTGCCGCAGCCCGAGTAC ATGTCGAATCGGTGCTGAACCGTGTGCCGCAGCCCGAGTAC < 41bp 0.865410963283877 0.663636230045668 0.32950956 0.2639836 prediction 0.403549466476419 Functional Loss - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912471 chrX:18912469 synonymous SNV . 0 23 hm5C_associated_SNPs_97373 0 0 5 BUD13 POSTAR2 ENCODE chrX:18912454-18912501
64251 chr11 10517275 10517275 1 + G A SKCM 10517272 + 10517252 10517292 41 CGCTGGATCATCCAGGTGCCCCGGATTTAGTAAGTGAGGTG CGCTGGATCATCCAGGTGCCCCGAATTTAGTAAGTGAGGTG < 41bp 0.701769606362012 0.455279313387957 0.49020815 0.2666613 prediction 0.403539212724023 Functional Loss - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10517272 chr11:10517275 synonymous SNV . 0 24 hm5C_associated_SNPs_97376 0 0 2 BUD13 POSTAR2 ENCODE chr11:10517246-10517329
64251 chr2 24246992 24246992 1 + C T LUAD 24246989 + 24246969 24247009 41 TCGGGGTATAAGGCAGGGGTCTGCAAGCAAGCAGAGGAGGT TCGGGGTATAAGGCAGGGGTCTGTAAGCAAGCAGAGGAGGT < 41bp 0.701768933244419 0.488224293682022 0.9229913 0.89006877 prediction 0.403537866488837 Functional Loss - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24246989 chr2:24246992 synonymous SNV . 0 24 hm5C_associated_SNPs_97378 0 0 1 BUD13 POSTAR2 ENCODE chr2:24246962-24247026
64251 chr10 127516153 127516153 1 + T C STAD 127516152 + 127516132 127516172 41 TCTAAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCT TCTAAAGGCTCCTGTGAACACCGCAGAACTAACAGATCTCT < 41bp 0.837175438749653 0.63540785616207 0.13078272 0.12193841 prediction 0.403535165175167 Functional Loss - BCCIP ENSG00000107949 CDS Human protein_coding chr10:127516152 chr10:127516153 synonymous SNV . 0 22 hm5C_associated_SNPs_97382 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:127516120-127516160
64251 chr15 67835778 67835778 1 + C T UCEC 67835775 + 67835755 67835795 41 GCGGTGGACTGGACAGTGCACTCCGGGCCGCAGTTACTCTT GCGGTGGACTGGACAGTGCACTCTGGGCCGCAGTTACTCTT < 41bp 0.766132281821414 0.564368975711653 0.30947965 0.13931453 prediction 0.403526612219522 Functional Loss - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:67835775 chr15:67835778 synonymous SNV . 0 24 hm5C_associated_SNPs_97385 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr15:67835761-67835787
64251 chr16 67235735 67235735 1 + C T UCEC 67235732 + 67235712 67235752 41 CCGGGCTAAGTGCTGACCGTCGCCGTTCCCTCTGTGCCCGA CCGGGCTAAGTGCTGACCGTCGCTGTTCCCTCTGTGCCCGA < 41bp 0.764087012604613 0.562325704051608 0.26445466 0.10049677 prediction 0.40352261710601 Functional Loss - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67235732 chr16:67235735 nonsynonymous SNV 0.888 4 24 hm5C_associated_SNPs_97387 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:67235729-67235750
64251 chr16 2285300 2285300 1 + C T COAD 2285297 + 2285277 2285317 41 CAGATCATCGTGCAGAACGTCACCATGGACGAGGAGACGGC CAGATCATCGTGCAGAACGTCACTATGGACGAGGAGACGGC < 41bp 0.761692197247103 0.559932583911014 0.19232973 0.037487417 prediction 0.403519226672178 Functional Loss - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2285297 chr16:2285300 synonymous SNV . 0 24 hm5C_associated_SNPs_97388 0 0 6 RBM15 POSTAR2 GSE78030,GSM2064710 chr16:2285300-2285301
64251 chr6 80878646 80878646 1 + G T LUAD 80878642 + 80878622 80878662 41 CGCTCTGGGGATCTTTTTAACTGTGGAAGCCTCACTATCCG CGCTCTGGGGATCTTTTTAACTGTTGAAGCCTCACTATCCG < 41bp 0.717130059243057 0.515371392379554 0.2626406 0.15391743 prediction 0.403517333727006 Functional Loss - BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80878642 chr6:80878646 stopgain 0.998 1 25 hm5C_associated_SNPs_97390 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:80878624-80878654
64251 chr1 100964693 100964693 1 + G T GBM 100964689 + 100964669 100964709 41 TACAACAGAAGCAGCAACAGCAACGGGGGCAACCTGAACAG TACAACAGAAGCAGCAACAGCAACTGGGGCAACCTGAACAG < 41bp 0.727037800187054 0.52528181227024 0.36643308 0.30313894 prediction 0.403511975833628 Functional Loss - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964689 chr1:100964693 nonsynonymous SNV 0.009 3 25 hm5C_associated_SNPs_97393 0 0 1 YBX3 POSTAR2 ENCODE chr1:100964685-100964807
64251 chr22 50987520 50987520 1 + C T SKCM 50987518 + 50987498 50987538 41 GGGCCCTCGTGGCGAGGAGCCTCCTGCGGCGGCCCCTGTGT GGGCCCTCGTGGCGAGGAGCCTTCTGCGGCGGCCCCTGTGT < 41bp 0.701755463618729 0.450760484338075 0.25131682 0.33945507 prediction 0.403510927237457 Functional Loss - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987518 chr22:50987520 nonsynonymous SNV 0.010 1 23 hm5C_associated_SNPs_97394 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:50987516-50987561
64251 chr16 89987176 89987176 1 + G T UCEC 89987173 + 89987153 89987193 41 CCCTGCCTCAGGCCAAGGGACCAGGTTTGCAGGAGCCCCCC CCCTGCCTCAGGCCAAGGGACCATGTTTGCAGGAGCCCCCC < 41bp 0.701754465413873 0.342039640901012 0.36822927 0.02795133 prediction 0.403508930827746 Functional Loss - MC1R ENSG00000258839 CDS Human protein_coding chr16:89987173 chr16:89987176 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_97395 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:89987148-89987177
64251 chr16 58314586 58314586 1 + C T STAD 58314583 + 58314563 58314603 41 CAGGCCAGGGCACGTCTCACCACCGAAGTTCAGGACTCCTC CAGGCCAGGGCACGTCTCACCACTGAAGTTCAGGACTCCTC < 41bp 0.766038784296332 0.56429130849907 0.17612997 0.13971499 prediction 0.403494951594525 Functional Loss - PRSS54 ENSG00000103023 CDS Human protein_coding chr16:58314583 chr16:58314586 nonsynonymous SNV 0.018 4 24 hm5C_associated_SNPs_97402 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:58314580-58314600
64251 chr9 116299150 116299150 1 + G C BLCA 116299146 + 116299126 116299166 41 GAGAGTGTGCTGGTGCCTGTCGGAGAACATCGCCAAGCAGC GAGAGTGTGCTGGTGCCTGTCGGACAACATCGCCAAGCAGC < 41bp 0.701742568274106 0.406955512238025 0.90661806 0.59513223 prediction 0.403485136548213 Functional Loss - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116299146 chr9:116299150 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_97405 0 0 4 BUD13 POSTAR2 ENCODE chr9:116299112-116299232
64251 chr10 45480368 45480368 1 + C T COAD 45480365 + 45480345 45480385 41 GCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGG GCCGCGCCCCCGGTGAGGCCCAGTGCATCCGGCGACACCGG < 41bp 0.752290941067813 0.550558428068139 0.27033424 0.16194627 prediction 0.403465025999348 Functional Loss - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480365 chr10:45480368 nonsynonymous SNV 0.877 3 24 hm5C_associated_SNPs_97413 0 0 1 PPIG POSTAR2 ENCODE chr10:45480253-45480410
64251 chr1 147091129 147091129 1 + C T COAD 147091126 + 147091106 147091146 41 GAGCACAAAGTGGGGGACCGCAGCAGAATCCTGGGGTATTA GAGCACAAAGTGGGGGACCGCAGTAGAATCCTGGGGTATTA < 41bp 0.77649803279179 0.57476611413088 0.6992407 0.73772204 prediction 0.403463837321819 Functional Loss - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147091126 chr1:147091129 stopgain 0.996 1 24 hm5C_associated_SNPs_97417 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:147091112-147091141
64251 chr16 106609 106609 1 + C T UCEC 106606 + 106586 106626 41 TCACGGAAGACAGAAAGAAGCTCCGAGAGTAAGTGCCGGCC TCACGGAAGACAGAAAGAAGCTCTGAGAGTAAGTGCCGGCC < 41bp 0.776935530263961 0.575205331895215 0.35056144 0.29149354 prediction 0.403460396737492 Functional Loss - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:106606 chr16:106609 stopgain 0.984 1 24 hm5C_associated_SNPs_97419 0 0 2 SF3B4 POSTAR2 ENCODE chr16:106516-106612
64251 chr11 129873177 129873177 1 + G T rs189405933 129873174 + 129873154 129873194 41 CAGCCTGCGCCCGTGCTAAGCCCGCCTCCCGCGCGCCCGAG CAGCCTGCGCCCGTGCTAAGCCCTCCTCCCGCGCGCCCGAG < 41bp 0.701729155918258 0.309230351272445 0.27166998 0.19792837 prediction 0.403458311836516 Functional Loss - LINC00167 ENSG00000233220 ncRNA_exonic Human lincRNA chr11:129873174 chr11:129873177 . . 0 24 hm5C_associated_SNPs_97420 0 0 1 NKRF POSTAR2 ENCODE chr11:129873169-129873251
64251 chr17 35872745 35872745 1 + C T HNSC 35872743 + 35872723 35872763 41 CGCTCAGCCACGCTGTGTATCGCGTACCTGATGAAATTCCA CGCTCAGCCACGCTGTGTATCGTGTACCTGATGAAATTCCA < 41bp 0.701720772717981 0.434900592821941 0.55502987 0.73960435 prediction 0.403441545435962 Functional Loss - DUSP14 ENSG00000161326 CDS Human other chr17:35872743 chr17:35872745 nonsynonymous SNV 0.320 3 23 hm5C_associated_SNPs_97424 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:35872739-35872776
64251 chr19 58697121 58697121 1 + G T GBM 58697119 + 58697099 58697139 41 TGTAACACTGGGTTTTACCCCGGAAGAGTGGGGACTGCTGG TGTAACACTGGGTTTTACCCCGTAAGAGTGGGGACTGCTGG < 41bp 0.701708538038589 0.385208598374254 0.471117 0.14739159 prediction 0.403417076077178 Functional Loss - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58697119 chr19:58697121 stopgain 0.153 0 23 hm5C_associated_SNPs_97431 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58697065-58697134
64251 chr5 176083739 176083739 1 + C T COAD 176083736 + 176083716 176083756 41 GGCTTCATCCACACCAAAGGCTGCGTGGGCCAGTTTGAGAA GGCTTCATCCACACCAAAGGCTGTGTGGGCCAGTTTGAGAA < 41bp 0.754287754706504 0.552580247992087 0.12546214 0.05865231 prediction 0.403415013428835 Functional Loss - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176083736 chr5:176083739 synonymous SNV . 0 24 hm5C_associated_SNPs_97434 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:176083720-176083740
64251 chr6 86199235 86199235 1 + G A UCEC 86199232 + 86199212 86199252 41 ATTAACAACAACCTGAGACACACGGATGAAATGTTCTGGAA ATTAACAACAACCTGAGACACACAGATGAAATGTTCTGGAA < 41bp 0.796305788505955 0.594598373104629 0.39306352 0.15904447 prediction 0.403414830802653 Functional Loss - NT5E ENSG00000135318 CDS Human protein_coding chr6:86199232 chr6:86199235 synonymous SNV . 0 24 hm5C_associated_SNPs_97435 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr6:86199200-86199240
64251 chr16 2133796 2133796 1 + G A UCEC 2133793 + 2133773 2133813 41 GAGGCAGCGCTAGGCATGGACAGGCGCACGGATGCCTACAG GAGGCAGCGCTAGGCATGGACAGACGCACGGATGCCTACAG < 41bp 0.70170682141957 0.456334244908176 0.8949238 0.87880087 prediction 0.40341364283914 Functional Loss - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2133793 chr16:2133796 synonymous SNV . 0 24 hm5C_associated_SNPs_97436 0 0 2 PPIG POSTAR2 ENCODE chr16:2133718-2133813
64251 chr11 76507587 76507587 1 + C T COAD 76507584 + 76507564 76507604 41 CTCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATGTGCG CTCCCGGCACTGCAGAGCGTCAGTGTGGGCCAGGATGTGCG < 41bp 0.718731578278921 0.517025328851152 0.7419323 0.32819647 prediction 0.403412498855539 Functional Loss - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507584 chr11:76507587 synonymous SNV . 0 24 hm5C_associated_SNPs_97439 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:76507582-76507611
64251 chr4 1738974 1738974 1 + C T rs144550220 1738972 + 1738952 1738992 41 CTCTGCTTGGTGGCAGCATGCACGGTGCAAATGAGACTCCC CTCTGCTTGGTGGCAGCATGCATGGTGCAAATGAGACTCCC < 41bp 0.844977383070601 0.643274246113165 0.9006034 0.8981736 prediction 0.403406273914873 Functional Loss - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1738972 chr4:1738974 synonymous SNV . 0 23 hm5C_associated_SNPs_97444 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:1738957-1738980
64251 chr1 151263026 151263026 1 + C T HNSC 151263024 + 151263004 151263044 41 TGGCCGGGGGACCACCTTGGCTCGGGGTTCCAGTGCCAGAG TGGCCGGGGGACCACCTTGGCTTGGGGTTCCAGTGCCAGAG < 41bp 0.843756380212858 0.642057807957039 0.41166073 0.25587726 prediction 0.403397144511639 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151263024 chr1:151263026 nonsynonymous SNV 0.097 2 23 hm5C_associated_SNPs_97446 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:151263006-151263035
64251 chr6 27782938 27782938 1 + T C CESC 27782937 + 27782917 27782957 41 CAGCCGCAAGGAGAGCTACTCTGTGTATGTGTACAAGGTGC CAGCCGCAAGGAGAGCTACTCCGTGTATGTGTACAAGGTGC < 41bp 0.721043052635285 0.519345255784632 0.11295098 0.16082767 prediction 0.403395593701305 Functional Loss - HIST1H2BM ENSG00000196374 CDS Human other chr6:27782937 chr6:27782938 synonymous SNV . 0 22 hm5C_associated_SNPs_97447 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831622 chr6:27782920-27782940
64251 chr6 43106921 43106921 1 + C T UCEC 43106918 + 43106898 43106938 41 AATGGGACCTTGCGCATCAACAGCGTGGAGGTGTATGATGG AATGGGACCTTGCGCATCAACAGTGTGGAGGTGTATGATGG < 41bp 0.701694571341792 0.478591637709338 0.3511309 0.12729636 prediction 0.403389142683585 Functional Loss - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43106918 chr6:43106921 synonymous SNV . 0 24 hm5C_associated_SNPs_97452 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:43106903-43106934
64251 chr12 122064794 122064794 1 + G T LUAD 122064790 + 122064770 122064810 41 GGCCCCGCCACCGCCACCGCCGCCGTCCGCCGTCACCTACC GGCCCCGCCACCGCCACCGCCGCCTTCCGCCGTCACCTACC < 41bp 0.701690106115832 0.496781342054999 0.8604374 0.22010344 prediction 0.403380212231665 Functional Loss - ORAI1 ENSG00000182500 CDS Human other chr12:122064790 chr12:122064794 synonymous SNV . 0 25 hm5C_associated_SNPs_97455 0 0 2 DDX3X POSTAR2 ENCODE chr12:122064780-122064875
64251 chr17 79852410 79852410 1 + C T READ 79852407 + 79852387 79852427 41 GCCACTTGGCTCTGGGTGGCCAACGATGAGAACTGTGGCAT GCCACTTGGCTCTGGGTGGCCAATGATGAGAACTGTGGCAT < 41bp 0.726993336583077 0.525317810163048 0.79722244 0.745831 prediction 0.403351052840058 Functional Loss - ANAPC11 ENSG00000141552 CDS Human protein_coding chr17:79852407 chr17:79852410 synonymous SNV . 0 24 hm5C_associated_SNPs_97462 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:79852360-79852420
64251 chr19 33696492 33696492 1 + C T rs3745976 33696489 + 33696469 33696509 41 TTTGCCTCCCCAGACCTGTTCGGCGCCGCTCGCGGGCCCTC TTTGCCTCCCCAGACCTGTTCGGTGCCGCTCGCGGGCCCTC < 41bp 0.702967474185496 0.501292342281147 0.9012213 0.48623517 prediction 0.403350263808698 Functional Loss - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696489 chr19:33696492 synonymous SNV . 0 24 hm5C_associated_SNPs_97463 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:33696464-33696500
64251 chr1 173457376 173457376 1 + C T rs35364344 173457374 + 173457354 173457394 41 TTTTTTTTTAACTGTCCTATCACGTCCTCTCCTGTCACCCA TTTTTTTTTAACTGTCCTATCATGTCCTCTCCTGTCACCCA < 41bp 0.701659930436278 0.46428232132953 0.07066521 0.036369503 prediction 0.403319860872556 Functional Loss - PRDX6 ENSG00000117592 UTR3 Human protein_coding chr1:173457374 chr1:173457376 . . 0 23 hm5C_associated_SNPs_97470 0 0 32 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:173457315-173457399
64251 chr1 173457377 173457377 1 + G A rs112926420 173457374 + 173457354 173457394 41 TTTTTTTTTAACTGTCCTATCACGTCCTCTCCTGTCACCCA TTTTTTTTTAACTGTCCTATCACATCCTCTCCTGTCACCCA < 41bp 0.701659930436278 0.470909023846712 0.07066521 0.068790466 prediction 0.403319860872556 Functional Loss - PRDX6 ENSG00000117592 UTR3 Human protein_coding chr1:173457374 chr1:173457377 . . 0 24 hm5C_associated_SNPs_97471 0 0 34 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:173457315-173457399
64251 chr7 116339282 116339282 1 + G A rs11762213 116339279 + 116339259 116339299 41 TATCAGCTTCCCAACTTCACCGCGGAAACACCCATCCAGAA TATCAGCTTCCCAACTTCACCGCAGAAACACCCATCCAGAA < 41bp 0.757570446599393 0.555914323142806 0.05548477 0.021815151 prediction 0.403312246913173 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116339279 chr7:116339282 synonymous SNV . 0 24 hm5C_associated_SNPs_97473 3 0 1 DDX3X POSTAR2 ENCODE chr7:116339270-116339295
64251 chr9 4664457 4664457 1 + T C rs55977885 4664456 + 4664436 4664476 41 ATACCAGGCACAAGATAAAACTCCAAAATTTCTGTTTACAT ATACCAGGCACAAGATAAAACCCCAAAATTTCTGTTTACAT < 41bp 0.75751255190772 0.55585872102235 0.9592205 0.08395645 prediction 0.403307661770741 Functional Loss - PLPP6 ENSG00000205808 UTR3 Human protein_coding chr9:4664456 chr9:4664457 . . 0 22 hm5C_associated_SNPs_97477 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr9:4664449-4664481
64251 chr4 4864847 4864847 1 + T C PRAD 4864846 + 4864826 4864866 41 CTCTACACGGCCCATGTGGGCTACAGCATGTACCACCTGAC CTCTACACGGCCCATGTGGGCCACAGCATGTACCACCTGAC < 41bp 0.70165193227638 0.448886055978725 0.43823656 0.3766861 prediction 0.403303864552759 Functional Loss - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864846 chr4:4864847 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_97481 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr4:4864840-4864860
64251 chr12 9840677 9840677 1 + G A UCEC 9840674 + 9840654 9840694 41 TTGCTCAGGTTGAAAGCTTCCAGGAACTGGTAAGAAAATAG TTGCTCAGGTTGAAAGCTTCCAGAAACTGGTAAGAAAATAG < 41bp 0.769862287111037 0.56821128929359 0.5625922 0.35865027 prediction 0.403301995634895 Functional Loss - CLEC2D ENSG00000069493 CDS Human protein_coding chr12:9840674 chr12:9840677 nonsynonymous SNV 0.614 3 24 hm5C_associated_SNPs_97483 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr12:9840642-9840683
64251 chr12 2930439 2930439 1 + C T SKCM 2930436 + 2930416 2930456 41 TGCTGTGCACAGGGAGACCCCAGCTGCCCGAGACGTGGTGC TGCTGTGCACAGGGAGACCCCAGTTGCCCGAGACGTGGTGC < 41bp 0.754791050142497 0.553143286246435 0.15800717 0.18158358 prediction 0.403295527792125 Functional Loss - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930436 chr12:2930439 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_97488 0 0 1 PPIG POSTAR2 ENCODE chr12:2930426-2930460
64251 chr2 86439826 86439826 1 + A C rs188722011 86439822 + 86439802 86439842 41 CCTCAGCATCCAAAGATGGACTGAAGTGGGATGGCTGACAG CCTCAGCATCCAAAGATGGACTGACGTGGGATGGCTGACAG < 41bp 0.792408196680712 0.590767150068503 0.17776462 0.14949778 prediction 0.403282093224419 Functional Loss - MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86439822 chr2:86439826 . . 0 25 hm5C_associated_SNPs_97493 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:86439763-86439846
64251 chr16 66997277 66997277 1 + C T COAD 66997274 + 66997254 66997294 41 GGGTGTGCGGGATGCCAGCACTGCGCCCCCAATGTGAGTAG GGGTGTGCGGGATGCCAGCACTGTGCCCCCAATGTGAGTAG < 41bp 0.762941406907788 0.561302015418779 0.11599639 0.14890876 prediction 0.403278782978018 Functional Loss - CES3 ENSG00000172828 CDS Human protein_coding chr16:66997274 chr16:66997277 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_97495 0 0 1 SND1 POSTAR2 ENCODE chr16:66997194-66997289
64251 chr5 79961072 79961072 1 + C T MESO 79961069 + 79961049 79961089 41 GTAGAGTCCAGACAGAATCTCTGCAGGAGAGATTTGCAGTT GTAGAGTCCAGACAGAATCTCTGTAGGAGAGATTTGCAGTT < 41bp 0.786145293860636 0.584507658873332 0.26581204 0.2010082 prediction 0.403275269974607 Functional Loss - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79961069 chr5:79961072 stopgain 0.244 0 24 hm5C_associated_SNPs_97497 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:79961045-79961084
64251 chr1 146651022 146651022 1 + C T SKCM 146651020 + 146651000 146651040 41 CACAGCCAATGATGTGCCTTCTCCATATGAAGTCAGAGTTT CACAGCCAATGATGTGCCTTCTTCATATGAAGTCAGAGTTT < 41bp 0.701634582402752 0.421409154525225 0.95123434 0.35870034 prediction 0.403269164805504 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146651020 chr1:146651022 . . 0 23 hm5C_associated_SNPs_97499 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr1:146651013-146651034
64251 chr2 102476321 102476321 1 + C T LUSC 102476319 + 102476299 102476339 41 CTACGAGCCTGCTGACCGAGCGCGAGAGGTATCCTCTTTCC CTACGAGCCTGCTGACCGAGCGTGAGAGGTATCCTCTTTCC < 41bp 0.843890877703352 0.642256585936112 0.2459718 0.26316187 prediction 0.40326858353448 Functional Loss - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102476319 chr2:102476321 stopgain 0.843 0 23 hm5C_associated_SNPs_97500 0 0 6 GRWD1 POSTAR2 ENCODE chr2:102476291-102476325
64251 chr12 109962291 109962291 1 + G T LUSC 109962287 + 109962267 109962307 41 CTGGGCCTGACGCTGTCTTACGACGAGGACGTCATGGGTCA CTGGGCCTGACGCTGTCTTACGACTAGGACGTCATGGGTCA < 41bp 0.701632880045969 0.491829572356561 0.8365313 0.21089873 prediction 0.403265760091939 Functional Loss - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109962287 chr12:109962291 stopgain 0.740 1 25 hm5C_associated_SNPs_97503 0 0 4 BUD13 POSTAR2 ENCODE chr12:109962240-109962360
64251 chr14 24624494 24624494 1 + C T rs374641335 24624491 + 24624471 24624511 41 GCCTGTGGCCGCCCCGACCTCACCGATGACACACAGTTGCT GCCTGTGGCCGCCCCGACCTCACTGATGACACACAGTTGCT < 41bp 0.701630097652957 0.474295411133969 0.1888256 0.19610658 prediction 0.403260195305915 Functional Loss - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24624491 chr14:24624494 synonymous SNV . 0 24 hm5C_associated_SNPs_97504 0 0 3 BUD13 POSTAR2 ENCODE chr14:24624488-24624539
64251 chr5 96271809 96271809 1 + G T rs538957339 96271806 + 96271786 96271826 41 TCAGCTGGGCCGCCTCAGCTCTCGGAGTAGGAAGCTCGGGC TCAGCTGGGCCGCCTCAGCTCTCTGAGTAGGAAGCTCGGGC < 41bp 0.864106976792269 0.662478048657473 0.3863004 0.47735837 prediction 0.403257856269591 Functional Loss - LNPEP ENSG00000113441 UTR5 Human protein_coding chr5:96271806 chr5:96271809 . . 0 24 hm5C_associated_SNPs_97505 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:96271780-96271820
64251 chr9 132630355 132630355 1 + G A CESC 132630352 + 132630332 132630372 41 CTCAAGGAGCCGGTGGTGGCCACGGTGGCGCTGACGGAGGC CTCAAGGAGCCGGTGGTGGCCACAGTGGCGCTGACGGAGGC < 41bp 0.817991370117261 0.616366700484952 0.8126607 0.7896284 prediction 0.403249339264619 Functional Loss - USP20 ENSG00000136878 CDS Human protein_coding chr9:132630352 chr9:132630355 synonymous SNV . 0 24 hm5C_associated_SNPs_97507 0 0 4 FMR1 POSTAR2 ENCODE chr9:132630281-132630383
64251 chr21 45739985 45739985 1 + G A GBM 45739982 + 45739962 45740002 41 TCCAGGAGCTTCGAGAACAACTGGAACATTTACAAGCTCCT TCCAGGAGCTTCGAGAACAACTGAAACATTTACAAGCTCCT < 41bp 0.701623373565552 0.46680345039545 0.8023188 0.92359746 prediction 0.403246747131104 Functional Loss - PFKL ENSG00000141959 CDS Human protein_coding chr21:45739982 chr21:45739985 stopgain 1.000 1 24 hm5C_associated_SNPs_97512 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45739954-45739992
64251 chr3 112302306 112302306 1 + G A rs114245569 112302303 + 112302283 112302323 41 TTTAAGTCATTTAAACAAGCCACGGTGGGGCTTTTTTCTCC TTTAAGTCATTTAAACAAGCCACAGTGGGGCTTTTTTCTCC < 41bp 0.725714842752702 0.524095702943418 0.024740547 0.028322339 prediction 0.403238279618568 Functional Loss - SLC35A5 ENSG00000138459 UTR3 Human protein_coding chr3:112302303 chr3:112302306 . . 0 24 hm5C_associated_SNPs_97517 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr3:112302279-112302306
64251 chr1 90048354 90048354 1 + C T PRAD 90048352 + 90048332 90048372 41 GGCCGGAGCTCTCCAGCTGACGCAGAGCAGGGTTCTGTGCT GGCCGGAGCTCTCCAGCTGACGTAGAGCAGGGTTCTGTGCT < 41bp 0.701615015485318 0.424561250711714 0.87156093 0.84848136 prediction 0.403230030970636 Functional Loss - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048352 chr1:90048354 stopgain 0.938 1 23 hm5C_associated_SNPs_97520 0 0 2 IGF2BP2 POSTAR2 ENCODE chr1:90048307-90048360
64251 chrX 120182600 120182600 1 + A T COAD 120182598 + 120182578 120182618 41 AACTGGAAGACTTCAAATTGCAACATGGGTCCATTCTGGGC AACTGGAAGACTTCAAATTGCATCATGGGTCCATTCTGGGC < 41bp 0.729348780852265 0.527737363839541 0.13359591 0.04276669 prediction 0.403222834025448 Functional Loss - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120182598 chrX:120182600 nonsynonymous SNV 0.928 3 23 hm5C_associated_SNPs_97522 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:120182565-120182600
64251 chr10 3124623 3124623 1 + C T CESC 3124620 + 3124600 3124640 41 GCCGTGGTGCGCATGGGTATCTACGTGGGGGCCAAGGTGTA GCCGTGGTGCGCATGGGTATCTATGTGGGGGCCAAGGTGTA < 41bp 0.703602472119031 0.501991547326238 0.45537123 0.5109043 prediction 0.403221849585586 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3124620 chr10:3124623 nonsynonymous SNV 0.977 2 24 hm5C_associated_SNPs_97523 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr10:3124616-3124635
64251 chr9 139873744 139873744 1 + G A SKCM 139873741 + 139873721 139873761 41 TCCCTCGGCTCCTACAGCTACCGGAGTCCCCGTGAGTGGGG TCCCTCGGCTCCTACAGCTACCGAAGTCCCCGTGAGTGGGG < 41bp 0.824097085073788 0.622487771057686 0.5432639 0.19753489 prediction 0.403218628032204 Functional Loss - PTGDS ENSG00000107317 CDS Human protein_coding chr9:139873741 chr9:139873744 synonymous SNV . 0 24 hm5C_associated_SNPs_97525 0 0 1 FUS POSTAR2 GSE43308,GSM1060383 chr9:139873740-139873760
64251 chr1 46871713 46871713 1 + G A rs72480613 46871710 + 46871690 46871730 41 ATCTTATGTTTCTTATCCAGCAAGAGTGGCCTGAAGGGCTG ATCTTATGTTTCTTATCCAGCAAAAGTGGCCTGAAGGGCTG < 41bp 0.818657703698274 0.617052356099529 0.38901424 0.21936119 prediction 0.403210695197489 Functional Loss - FAAH ENSG00000117480 CDS Human protein_coding chr1:46871710 chr1:46871713 synonymous SNV . 0 24 hm5C_associated_SNPs_97527 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:46871639-46871714
64251 chr10 15139465 15139465 1 + G A rs76035503 15139462 + 15139442 15139482 41 CAGCCCCGGGGGGATCGGGCCCGGGACTCTGCGGAATCTGG CAGCCCCGGGGGGATCGGGCCCGAGACTCTGCGGAATCTGG < 41bp 0.758192775238372 0.556588861498884 0.8530932 0.36468828 prediction 0.403207827478978 Functional Loss - RPP38 ENSG00000152464 UTR5 Human protein_coding chr10:15139462 chr10:15139465 . . 0 24 hm5C_associated_SNPs_97528 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:15139454-15139477
64251 chr22 20909268 20909268 1 + G A BLCA 20909265 + 20909245 20909285 41 CCTGACTGGCGGACCTGCTGCGGGAGCCGCTGGAATTGGCA CCTGACTGGCGGACCTGCTGCGGAAGCCGCTGGAATTGGCA < 41bp 0.810473040210942 0.608873099377095 0.9274589 0.8765068 prediction 0.403199881667693 Functional Loss - MED15 ENSG00000099917 CDS Human protein_coding chr22:20909265 chr22:20909268 nonsynonymous SNV 0.199 5 24 hm5C_associated_SNPs_97532 0 0 3 BUD13 POSTAR2 ENCODE chr22:20909201-20909298
64251 chr13 77566284 77566284 1 + G T LUAD 77566281 + 77566261 77566301 41 GGCGCCGAGATGCGGCGGGGCGCGGGCGCGGCTCGGGGACG GGCGCCGAGATGCGGCGGGGCGCTGGCGCGGCTCGGGGACG < 41bp 0.93799100545953 0.736397868896314 0.84348524 0.47427055 prediction 0.403186273126433 Functional Loss - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77566281 chr13:77566284 synonymous SNV . 0 24 hm5C_associated_SNPs_97534 0 0 2 DDX3X POSTAR2 ENCODE chr13:77566268-77566396
64251 chr6 44118015 44118015 1 + G T LUAD 44118012 + 44117992 44118032 41 TGCTACACTTTCCTCATCTTCATGGTGCTGCTCCTACCCTC TGCTACACTTTCCTCATCTTCATTGTGCTGCTCCTACCCTC < 41bp 0.701592281105609 0.29255392708144 0.23201707 0.13872623 prediction 0.403184562211218 Functional Loss - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44118012 chr6:44118015 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97535 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:44117993-44118015
64251 chr10 112359426 112359426 1 + G T LGG 112359424 + 112359404 112359444 41 TCATATAGCAACGTAGCTTACAGAGTTTGGAGGCAAGCTTG TCATATAGCAACGTAGCTTACATAGTTTGGAGGCAAGCTTG < 41bp 0.701591960839688 0.348974963016816 0.9044683 0.3761728 prediction 0.403183921679376 Functional Loss - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112359424 chr10:112359426 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_97536 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr10:112359407-112359435
64251 chr16 84695452 84695452 1 + C T STAD 84695449 + 84695429 84695469 41 TGGGCGTGGAGGCCTACAGCCCGCAGTGCAACCAGTGGACC TGGGCGTGGAGGCCTACAGCCCGTAGTGCAACCAGTGGACC < 41bp 0.729670071814712 0.528079466863657 0.31831366 0.2724095 prediction 0.403181209902111 Functional Loss - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695449 chr16:84695452 stopgain 1.000 1 24 hm5C_associated_SNPs_97539 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:84695451-84695452
64251 chr11 86519507 86519507 1 + G C SKCM 86519503 + 86519483 86519523 41 CCCTCCTGCTAAGCAGCTGCCAGGGGGCAGAATTCACTTCT CCCTCCTGCTAAGCAGCTGCCAGGCGGCAGAATTCACTTCT < 41bp 0.701590413115568 0.412804173373841 0.90753967 0.42290524 prediction 0.403180826231136 Functional Loss - PRSS23 ENSG00000150687 CDS Human protein_coding chr11:86519503 chr11:86519507 synonymous SNV . 0 25 hm5C_associated_SNPs_97540 0 0 1 DGCR8 POSTAR2 ENCODE chr11:86519479-86519520
64251 chr12 49522077 49522077 1 - G A LIHC 49522080 - 49522060 49522100 41 GCCACCATCAAAACCAAGCGCAGCATCCAGTTTGTGGATTG GCCACCATCAAAACCAAGCGCAGTATCCAGTTTGTGGATTG < 41bp 0.768241001825214 0.566652436723353 0.3075338 0.16800064 prediction 0.403177130203722 Functional Loss - TUBA1B ENSG00000123416 CDS Human protein_coding chr12:49522080 chr12:49522077 synonymous SNV . 0 24 hm5C_associated_SNPs_97541 0 0 37 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:49522040-49522080
64251 chr1 245006439 245006439 1 + C T rs1053697 245006437 + 245006417 245006457 41 TATTATATGAAGGTACCCACCTCGATCCTGAAAGAAAACAC TATTATATGAAGGTACCCACCTTGATCCTGAAAGAAAACAC < 41bp 0.876260805198487 0.674672380947108 0.23740107 0.013619065 prediction 0.403176848502757 Functional Loss - COX20 ENSG00000203667 CDS Human protein_coding chr1:245006437 chr1:245006439 synonymous SNV . 0 23 hm5C_associated_SNPs_97542 1 0 1 TRA2A POSTAR2 ENCODE chr1:245006420-245006493
64251 chr19 42791259 42791259 1 + G T UCEC 42791257 + 42791237 42791277 41 AGCCACATGCCCTGAGAGCCCAGGACCCGGACCCCCACACC AGCCACATGCCCTGAGAGCCCATGACCCGGACCCCCACACC < 41bp 0.922355880795057 0.720769399837672 0.498672 0.20923221 prediction 0.40317296191477 Functional Loss - CIC ENSG00000079432 CDS Human protein_coding chr19:42791257 chr19:42791259 stopgain 0.999 0 23 hm5C_associated_SNPs_97544 0 0 2 FMR1 POSTAR2 ENCODE chr19:42791217-42791290
64251 chr5 52780019 52780019 1 + T C UCS 52780018 + 52779998 52780038 41 CTGCTTCCTCTGAGCAATATCTCTGTGGGAATGATGGAGTC CTGCTTCCTCTGAGCAATATCCCTGTGGGAATGATGGAGTC < 41bp 0.701585543497593 0.431606185219285 0.5882629 0.6713964 prediction 0.403171086995186 Functional Loss - FST ENSG00000134363 CDS Human protein_coding chr5:52780018 chr5:52780019 nonsynonymous SNV 0.922 4 22 hm5C_associated_SNPs_97549 0 0 3 GRWD1 POSTAR2 ENCODE chr5:52779978-52780025
64251 chr7 55259451 55259451 1 + G A LGG 55259448 + 55259428 55259468 41 AGGACCGTCGCTTGGTGCACCGCGACCTGGCAGCCAGGAAC AGGACCGTCGCTTGGTGCACCGCAACCTGGCAGCCAGGAAC < 41bp 0.701580996117093 0.457690947030404 0.29751432 0.101020426 prediction 0.403161992234185 Functional Loss - EGFR ENSG00000146648 CDS Human protein_coding chr7:55259448 chr7:55259451 nonsynonymous SNV 0.962 2 24 hm5C_associated_SNPs_97554 0 0 3 BUD13 POSTAR2 ENCODE chr7:55259411-55259470
64251 chr16 5134910 5134910 1 + G A rs28609548 5134907 + 5134887 5134927 41 TGGGCCAGAGGCTAAAACCCCAGGACCCCTGCTGTCCTTCC TGGGCCAGAGGCTAAAACCCCAGAACCCCTGCTGTCCTTCC < 41bp 0.804724003708632 0.603147670256663 0.8482737 0.6714979 prediction 0.403152666903936 Functional Loss - ALG1;EEF2KMT ENSG00000033011;ENSG00000118894 UTR3 Human other chr16:5134907 chr16:5134910 . . 0 24 hm5C_associated_SNPs_97556 0 0 1 RPS3 POSTAR2 ENCODE chr16:5134883-5134932
64251 chr22 19119739 19119739 1 - A G UCEC 19119740 - 19119720 19119760 41 GCAGAAGACGTGGCTTTGGGCTTGGGGGGCTGCAGCCACGA GCAGAAGACGTGGCTTTGGGCCTGGGGGGCTGCAGCCACGA < 41bp 0.72313948340424 0.521565049506614 0.39216375 0.32502526 prediction 0.403148867795252 Functional Loss - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119740 chr22:19119739 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_97560 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:19119723-19119746
64251 chr15 38591612 38591612 1 + G C LUSC 38591611 + 38591591 38591631 41 TGCGAGCTGTGGTGATGACCCGAGATGACTCAAGTGGTGGA TGCGAGCTGTGGTGATGACCCCAGATGACTCAAGTGGTGGA < 41bp 0.893230417374579 0.691657704677929 0.36836612 0.30283445 prediction 0.403145425393298 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591611 chr15:38591612 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_97561 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:38591604-38591624
64251 chr11 63987235 63987235 1 + G T SARC 63987231 + 63987211 63987251 41 GGACAGCCTCACCACCATCCCAGAGCTCAAGGACCATCTCC GGACAGCCTCACCACCATCCCAGATCTCAAGGACCATCTCC < 41bp 0.701571471354046 0.486102300849621 0.21621081 0.08773884 prediction 0.403142942708091 Functional Loss - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987231 chr11:63987235 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_97562 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:63987159-63987235
64251 chr9 82333807 82333807 1 + C T GBM 82333805 + 82333785 82333825 41 AACCCCACGAGACACGTGTACACGGGTGGGAAGGGCTGCGT AACCCCACGAGACACGTGTACATGGGTGGGAAGGGCTGCGT < 41bp 0.868888621430289 0.667319219855136 0.17555481 0.1908007 prediction 0.403138803150306 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82333805 chr9:82333807 nonsynonymous SNV 0.762 4 23 hm5C_associated_SNPs_97564 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:82333806-82333841
64251 chr21 34660452 34660452 1 + G A UCEC 34660449 + 34660429 34660469 41 GTGGCCGTCATCCTCATGGCCTCGGTCTTCATGGTCTGCCT GTGGCCGTCATCCTCATGGCCTCAGTCTTCATGGTCTGCCT < 41bp 0.833131363443355 0.631566577237533 0.018616885 0.019421875 prediction 0.403129572411643 Functional Loss - IL10RB ENSG00000243646 CDS Human protein_coding chr21:34660449 chr21:34660452 synonymous SNV . 0 24 hm5C_associated_SNPs_97567 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:34660424-34660462
64251 chr16 30997087 30997087 1 + C T BLCA 30997085 + 30997065 30997105 41 TGCTGCAGCGGGAGCCCCGGCTCGGGGAGCTGCGGGTCTTT TGCTGCAGCGGGAGCCCCGGCTTGGGGAGCTGCGGGTCTTT < 41bp 0.836827721953831 0.635263230686377 0.2889501 0.5934452 prediction 0.403128982534907 Functional Loss - HSD3B7 ENSG00000099377;ENSG00000268863 CDS Human other chr16:30997085 chr16:30997087 synonymous SNV . 0 23 hm5C_associated_SNPs_97568 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1378377 chr16:30997087-30997088
64251 chr12 56428780 56428780 1 + C T BRCA 56428778 + 56428758 56428798 41 TGCGGGGGTGGTATCCCTCCCTCAGGGTCCCCCACCCCAGC TGCGGGGGTGGTATCCCTCCCTTAGGGTCCCCCACCCCAGC < 41bp 0.70156410790432 0.428082891038586 0.08654451 0.072027475 prediction 0.40312821580864 Functional Loss - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428778 chr12:56428780 stopgain 1.000 1 23 hm5C_associated_SNPs_97570 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:56428778-56428804
64251 chr8 38095669 38095669 1 + G T COAD 38095667 + 38095647 38095687 41 GGGGTTCAACACCCACGGAGCAGGGTCGACCAAGAACTGTG GGGGTTCAACACCCACGGAGCATGGTCGACCAAGAACTGTG < 41bp 0.701562348714018 0.344873572468187 0.70342505 0.13340682 prediction 0.403124697428036 Functional Loss - DDHD2 ENSG00000085788 CDS Human protein_coding chr8:38095667 chr8:38095669 nonsynonymous SNV 0.684 4 23 hm5C_associated_SNPs_97571 0 0 2 BUD13 POSTAR2 ENCODE chr8:38095612-38095685
64251 chr7 73960133 73960133 1 + C T STAD 73960131 + 73960111 73960151 41 GGTGGAGCTGCTCTTCAACACACGATACGGTGAGCAAGAAG GGTGGAGCTGCTCTTCAACACATGATACGGTGAGCAAGAAG < 41bp 0.862011756763447 0.660452442291941 0.06246817 0.13079742 prediction 0.403118628943012 Functional Loss - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73960131 chr7:73960133 stopgain 0.019 0 23 hm5C_associated_SNPs_97574 0 0 2 DDX24 POSTAR2 ENCODE chr7:73960087-73960138
64251 chr3 185341799 185341799 1 + G A SKCM 185341796 + 185341776 185341816 41 TGCTTTTTAGTCAGTATTTACAGGATGAAAGTAAGACCAAA TGCTTTTTAGTCAGTATTTACAGAATGAAAGTAAGACCAAA < 41bp 0.770002321506966 0.568446449834997 0.5981596 0.18905881 prediction 0.403111743343938 Functional Loss - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185341796 chr3:185341799 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97576 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:185341792-185341816
64251 chr1 231902976 231902976 1 + G A SKCM 231902973 + 231902953 231902993 41 GACAGCTTGCACGTGTCCATCACGAGACGAGACTGGCTTCT GACAGCTTGCACGTGTCCATCACAAGACGAGACTGGCTTCT < 41bp 0.780569069816094 0.57901987199311 0.92321134 0.87918305 prediction 0.403098395645969 Functional Loss - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231902973 chr1:231902976 synonymous SNV . 0 24 hm5C_associated_SNPs_97581 0 0 1 HNRNPA2B1 POSTAR2 GSE34996,GSM859982 chr1:231902960-231902980
64251 chr19 58198231 58198231 1 + C T PRAD 58198229 + 58198209 58198249 41 CCCCCACGGACCTACTCCAACACGAAGCCACTCCCAGTGGT CCCCCACGGACCTACTCCAACATGAAGCCACTCCCAGTGGT < 41bp 0.847825435539649 0.64627828301449 0.089660525 0.068247855 prediction 0.403094305050319 Functional Loss - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198229 chr19:58198231 synonymous SNV . 0 23 hm5C_associated_SNPs_97583 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:58198199-58198232
64251 chr3 183899783 183899783 1 + A T CESC 183899781 + 183899761 183899801 41 GGACGCACCAAACTGGAGGTCAAGGTGGTCATCAAGTCCAA GGACGCACCAAACTGGAGGTCATGGTGGTCATCAAGTCCAA < 41bp 0.752734429650271 0.551188931644782 0.3966097 0.36553028 prediction 0.403090996010979 Functional Loss - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183899781 chr3:183899783 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_97584 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183899756-183899830
64251 chr3 51661637 51661637 1 + C T rs191989141 51661635 + 51661615 51661655 41 AGAAGATGGGCAGCAGCCGCCGCGGTGCACTTCAACTACCT AGAAGATGGGCAGCAGCCGCCGTGGTGCACTTCAACTACCT < 41bp 0.701541996779405 0.438856216930138 0.15988475 0.06726876 prediction 0.40308399355881 Functional Loss - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51661635 chr3:51661637 nonsynonymous SNV 0.984 3 23 hm5C_associated_SNPs_97591 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:51661616-51661646
64251 chr11 60689262 60689262 1 + G T UCEC 60689259 + 60689239 60689279 41 CTTCCAGGTGATTACCTCGCCCAGGGCCTGAAGCTCAGCCC CTTCCAGGTGATTACCTCGCCCATGGCCTGAAGCTCAGCCC < 41bp 0.701539574457744 0.292366006145109 0.45549962 0.39677864 prediction 0.403079148915487 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689259 chr11:60689262 nonsynonymous SNV 0.964 0 24 hm5C_associated_SNPs_97596 0 0 5 RPS3 POSTAR2 ENCODE chr11:60689245-60689274
64251 chrX 48460488 48460488 1 + G T CESC 48460485 + 48460465 48460505 41 AAGCCAAGCGTTTGGTGGTGCATGAGGGGAGCCCTGTGACC AAGCCAAGCGTTTGGTGGTGCATTAGGGGAGCCCTGTGACC < 41bp 0.701538869791763 0.297158948573761 0.4214593 0.41237548 prediction 0.403077739583525 Functional Loss - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48460485 chrX:48460488 stopgain 0.987 1 24 hm5C_associated_SNPs_97597 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48460478-48460500
64251 chr11 2417170 2417170 1 + G A UCEC 2417167 + 2417147 2417187 41 CTCAAGAACAATTTGTGTCCCTCGGGCAGCAACATCATCAG CTCAAGAACAATTTGTGTCCCTCAGGCAGCAACATCATCAG < 41bp 0.812529585263755 0.610992692250683 0.04711339 0.031118572 prediction 0.403073786026144 Functional Loss - CD81 ENSG00000110651 CDS Human protein_coding chr11:2417167 chr11:2417170 synonymous SNV . 0 24 hm5C_associated_SNPs_97598 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:2417148-2417186
64251 chr11 7273526 7273526 1 + C T LIHC 7273523 + 7273503 7273543 41 GCTGCCAGGATTTCATTTACCACCTGCGGGACCGTGCCAGA GCTGCCAGGATTTCATTTACCACTTGCGGGACCGTGCCAGA < 41bp 0.713804702273449 0.512269339079444 0.14646986 0.16330495 prediction 0.403070726388009 Functional Loss - SYT9 ENSG00000170743 CDS Human protein_coding chr11:7273523 chr11:7273526 synonymous SNV . 0 24 hm5C_associated_SNPs_97601 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr11:7273499-7273535
64251 chr4 39201204 39201204 1 + G A UCEC 39201201 + 39201181 39201221 41 GTTAGTAATCAGGAAGGTGACACGATAAGACAGGTAATACA GTTAGTAATCAGGAAGGTGACACAATAAGACAGGTAATACA < 41bp 0.701535347934444 0.483298470687905 0.4272018 0.3998756 prediction 0.403070695868888 Functional Loss - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39201201 chr4:39201204 synonymous SNV . 0 24 hm5C_associated_SNPs_97602 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:39201183-39201205
64251 chr5 137762927 137762927 1 + G A BLCA 137762924 + 137762904 137762944 41 CTCTGCCAGAATATACCAAACGAGATGGCAGGCTCAATCTG CTCTGCCAGAATATACCAAACGAAATGGCAGGCTCAATCTG < 41bp 0.701534611685719 0.454929452217272 0.60353774 0.25633454 prediction 0.403069223371439 Functional Loss - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137762924 chr5:137762927 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97604 0 0 2 DDX24 POSTAR2 ENCODE chr5:137762911-137762927
64251 chr15 45007714 45007714 1 + A T DLBC 45007712 + 45007692 45007732 41 GTGTCTGGGTTTCATCCATCCGACATTGAAGTTGACTTACT GTGTCTGGGTTTCATCCATCCGTCATTGAAGTTGACTTACT < 41bp 0.714213301061099 0.512678894464644 0.14784756 0.07458913 prediction 0.403068813192909 Functional Loss - B2M ENSG00000166710 CDS Human protein_coding chr15:45007712 chr15:45007714 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_97605 0 0 38 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:45007627-45007742
64251 chr5 33459940 33459940 1 + G A LUAD 33459937 + 33459917 33459957 41 GTGGAGAAGGAGCTGTTTGCCCTGAAACCCATGAACTGCCC GTGGAGAAGGAGCTGTTTGCCCTAAAACCCATGAACTGCCC < 41bp 0.701534139755854 0.46966316707649 0.06687918 0.101590216 prediction 0.403068279511707 Functional Loss - TARS ENSG00000113407 CDS Human protein_coding chr5:33459937 chr5:33459940 synonymous SNV . 0 24 hm5C_associated_SNPs_97606 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:33459846-33459962
64251 chr16 2578617 2578617 1 + G A COAD 2578614 + 2578594 2578634 41 AGCCCGCATGCCAGGTGGCCCACGACCCCCCCAGAGCCTGC AGCCCGCATGCCAGGTGGCCCACAACCCCCCCAGAGCCTGC < 41bp 0.835094534773281 0.633560510778088 0.21377695 0.07482818 prediction 0.403068047990387 Functional Loss - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578614 chr16:2578617 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_97607 0 0 3 EFTUD2 POSTAR2 ENCODE chr16:2578582-2578622
64251 chr13 100634531 100634531 1 + G A rs189469383 100634528 + 100634508 100634548 41 CCGGGCGCGCACGAGCTGTCCCCGGGCCAGAGCTCGGCGTT CCGGGCGCGCACGAGCTGTCCCCAGGCCAGAGCTCGGCGTT < 41bp 0.828245615669757 0.62671338831196 0.4158287 0.11116046 prediction 0.403064454715593 Functional Loss - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634528 chr13:100634531 synonymous SNV . 0 24 hm5C_associated_SNPs_97609 1 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr13:100634520-100634540
64251 chr3 128987438 128987438 1 + G A COAD 128987435 + 128987415 128987455 41 CTCAAGTCTGTGCCCCTGGCCACGGCGCCCATGGCAGAGCA CTCAAGTCTGTGCCCCTGGCCACAGCGCCCATGGCAGAGCA < 41bp 0.701529671302411 0.449955284871715 0.23620394 0.25847805 prediction 0.403059342604821 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128987435 chr3:128987438 synonymous SNV . 0 24 hm5C_associated_SNPs_97611 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:128987424-128987447
64251 chr3 51426377 51426377 1 + C T SKCM 51426374 + 51426354 51426394 41 GCACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTGAAG GCACAGTGGACCTGAAGAAGCTCTGAGTTAAAGAGCTGAAG < 41bp 0.769555724642754 0.568027907064846 0.07559124 0.063712895 prediction 0.403055635155816 Functional Loss - MANF ENSG00000145050 CDS Human protein_coding chr3:51426374 chr3:51426377 stopgain 0.980 1 24 hm5C_associated_SNPs_97615 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:51426337-51426381
64251 chr17 6026008 6026008 1 + G A rs80345504 6026005 + 6025985 6026025 41 GGAGAGAGGAGTGACCGGGACTGGAGCCAGGGTCTGGGGAG GGAGAGAGGAGTGACCGGGACTGAAGCCAGGGTCTGGGGAG < 41bp 0.794064308464948 0.592536874899242 0.82628495 0.5905573 prediction 0.403054867131413 Functional Loss - WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6026005 chr17:6026008 . . 0 24 hm5C_associated_SNPs_97617 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:6025979-6026023
64251 chr15 85334030 85334030 1 + A T BRCA 85334026 + 85334006 85334046 41 ACAAGTCCCCCTACTGCTGCCCGGAGTGTGGGGTCCTCTGC ACAAGTCCCCCTACTGCTGCCCGGTGTGTGGGGTCCTCTGC < 41bp 0.701525058303243 0.372500306791712 0.8157686 0.50265855 prediction 0.403050116606487 Functional Loss - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85334026 chr15:85334030 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_97619 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:85334010-85334070
64251 chr10 76158301 76158301 1 + G A LUAD 76158298 + 76158278 76158318 41 CATCTTGATCTGGAGAAAAACTGGATGTTGGTAGAAAAAGC CATCTTGATCTGGAGAAAAACTGAATGTTGGTAGAAAAAGC < 41bp 0.716591430930329 0.515066792547922 0.5764816 0.2773826 prediction 0.403049276764813 Functional Loss - ADK ENSG00000156110 CDS Human protein_coding chr10:76158298 chr10:76158301 stopgain 0.955 1 24 hm5C_associated_SNPs_97620 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:76158260-76158334
64251 chr19 57802287 57802287 1 + C T rs28397613 57802285 + 57802265 57802305 41 ATGGGAAAATGAGCCTTGAACACGAAGGTTTGGCGACAGCT ATGGGAAAATGAGCCTTGAACATGAAGGTTTGGCGACAGCT < 41bp 0.845054904141047 0.643531761549519 0.34217507 0.1493881 prediction 0.403046285183055 Functional Loss - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802285 chr19:57802287 synonymous SNV . 0 23 hm5C_associated_SNPs_97621 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:57802195-57802308
64251 chr19 36606492 36606492 1 + G T COAD 36606488 + 36606468 36606508 41 GGTGACGGGGGTGTCGGCACCCACGGTGACCGTTTTCATCA GGTGACGGGGGTGTCGGCACCCACTGTGACCGTTTTCATCA < 41bp 0.741970166968537 0.540447294351194 0.088790864 0.016538471 prediction 0.403045745234687 Functional Loss - TBCB ENSG00000105254 CDS Human protein_coding chr19:36606488 chr19:36606492 synonymous SNV . 0 25 hm5C_associated_SNPs_97622 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:36606440-36606560
64251 chr12 81610752 81610752 1 + G A SKCM 81610749 + 81610729 81610769 41 AACACCTCCACCAGGGCAAGCAGGAAAAAGCGTCCCAGGAT AACACCTCCACCAGGGCAAGCAGAAAAAAGCGTCCCAGGAT < 41bp 0.815459027873425 0.613941930509911 0.8956919 0.45443946 prediction 0.403034194727028 Functional Loss - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81610749 chr12:81610752 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97628 0 0 1 BUD13 POSTAR2 ENCODE chr12:81610670-81610786
64251 chr7 16705105 16705105 1 + C T BLCA 16705102 + 16705082 16705122 41 AGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAA AGAAGCCAGTGCTAACAGGCCAGTGGTTCAAAACTCGGAAA < 41bp 0.756086846587055 0.554571089785315 0.39297074 0.24666369 prediction 0.403031513603479 Functional Loss - BZW2 ENSG00000136261 CDS Human protein_coding chr7:16705102 chr7:16705105 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97630 0 0 5 TARDBP POSTAR2 DRA001158,DRS012385 chr7:16705075-16705115
64251 chr17 80684787 80684787 1 + G T UCEC 80684783 + 80684763 80684803 41 GGGGACCTCTGGGGTGGAAACGTAGCAGAGGATTCCTCTGG GGGGACCTCTGGGGTGGAAACGTATCAGAGGATTCCTCTGG < 41bp 0.72915621653959 0.527643699570346 0.91416776 0.3299433 prediction 0.403025033938488 Functional Loss - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684783 chr17:80684787 nonsynonymous SNV 0.142 1 25 hm5C_associated_SNPs_97632 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr17:80684779-80684807
64251 chr17 20135652 20135652 1 + G A BRCA 20135649 + 20135629 20135669 41 GGAGGAGGAGGAGAAGAATGCCCGGTTGCAGAAGGAGCTGG GGAGGAGGAGGAGAAGAATGCCCAGTTGCAGAAGGAGCTGG < 41bp 0.701506807044339 0.459478947146037 0.26202282 0.1200386 prediction 0.403013614088678 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20135649 chr17:20135652 nonsynonymous SNV 0.941 3 24 hm5C_associated_SNPs_97636 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr17:20135644-20135687
64251 chr17 80442464 80442464 1 + C T rs544176784 80442462 + 80442442 80442482 41 TGCAAGAGCCTGTGCATGGGCTCGGCGTGACTGAGAGTCCT TGCAAGAGCCTGTGCATGGGCTTGGCGTGACTGAGAGTCCT < 41bp 0.775614196381538 0.574111959992544 0.2021313 0.18889806 prediction 0.403004472777986 Functional Loss - NARF ENSG00000141562 intronic Human protein_coding chr17:80442462 chr17:80442464 . . 0 23 hm5C_associated_SNPs_97639 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:80442447-80442476
64251 chr19 36486791 36486791 1 + G A rs535335153 36486788 + 36486768 36486808 41 GGGGCGGCCTGGGACGCTGGCGGGCTGGACAGTGTCAAGCC GGGGCGGCCTGGGACGCTGGCGGACTGGACAGTGTCAAGCC < 41bp 0.807811039977595 0.606311088448405 0.9058945 0.8770801 prediction 0.402999903058381 Functional Loss - SDHAF1 ENSG00000205138 UTR3 Human protein_coding chr19:36486788 chr19:36486791 . . 0 24 hm5C_associated_SNPs_97644 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:36486783-36486811
64251 chr11 20385868 20385868 1 + G T UCEC 20385864 + 20385844 20385884 41 GTCTTTATTTTGGGCGCCAGCGGAGAAACCGGCAGAGTGCT GTCTTTATTTTGGGCGCCAGCGGATAAACCGGCAGAGTGCT < 41bp 0.758478980134241 0.556989072620479 0.8859814 0.84382576 prediction 0.402979815027524 Functional Loss - HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20385864 chr11:20385868 stopgain 0.914 1 25 hm5C_associated_SNPs_97652 0 0 6 CPSF1 POSTAR2 GSE37401,GSM917672 chr11:20385842-20385874
64251 chr11 61205221 61205221 1 + C T SKCM 61205218 + 61205198 61205238 41 CATGATTGAAATCCCTTTGCCTCCATGGCAGGAGAGAACTG CATGATTGAAATCCCTTTGCCTCTATGGCAGGAGAGAACTG < 41bp 0.824307039740726 0.622817915142726 0.9561454 0.91122454 prediction 0.402978249196 Functional Loss - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61205218 chr11:61205221 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_97653 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:61205213-61205251
64251 chr10 103920264 103920264 1 + G T CESC 103920261 + 103920241 103920281 41 TCTAAGCCAGCTGGTACCACCAAGAATTCTTCAAATAAGCC TCTAAGCCAGCTGGTACCACCAATAATTCTTCAAATAAGCC < 41bp 0.70148537779518 0.307352396487461 0.14616853 0.086930424 prediction 0.40297075559036 Functional Loss - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920261 chr10:103920264 nonsynonymous SNV 0.111 3 24 hm5C_associated_SNPs_97656 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:103920209-103920308
64251 chr7 102110276 102110276 1 + C T UCEC 102110273 + 102110253 102110293 41 GACGCCCGCCTGCTGGCCGGCTGCGAGGGCGGCTGCTGCTG GACGCCCGCCTGCTGGCCGGCTGTGAGGGCGGCTGCTGCTG < 41bp 0.701484887760146 0.495922535248314 0.37245715 0.29505774 prediction 0.402969775520291 Functional Loss - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102110273 chr7:102110276 synonymous SNV . 0 24 hm5C_associated_SNPs_97657 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:102110264-102110296
64251 chr17 4858439 4858439 1 + C T CESC 4858436 + 4858416 4858456 41 CCATGCAGGAGTTCATGATTCTGCCTGTGGGAGCCAGCTCC CCATGCAGGAGTTCATGATTCTGTCTGTGGGAGCCAGCTCC < 41bp 0.701483471463092 0.479526702040869 0.15136737 0.20090511 prediction 0.402966942926183 Functional Loss - ENO3 ENSG00000108515 CDS Human protein_coding chr17:4858436 chr17:4858439 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_97658 0 0 1 SRSF9 POSTAR2 ENCODE chr17:4858434-4858580
64251 chr15 48434254 48434254 1 - C T UCEC 48434257 - 48434237 48434277 41 ATATCAAACACATTGGATCCCACGATGTTAGACATAGCCAT ATATCAAACACATTGGATCCCACAATGTTAGACATAGCCAT < 41bp 0.777790743242341 0.576308572562264 0.0137197375 0.042203248 prediction 0.402964341360154 Functional Loss - SLC24A5 ENSG00000188467 CDS Human protein_coding chr15:48434257 chr15:48434254 synonymous SNV . 0 24 hm5C_associated_SNPs_97659 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:48434230-48434266
64251 chr10 44112192 44112192 1 + G T PAAD 44112188 + 44112168 44112208 41 ACTCAATCCTTTTAAGTCATCAGAGAATTCATACTGGCCAG ACTCAATCCTTTTAAGTCATCAGATAATTCATACTGGCCAG < 41bp 0.71922840563748 0.517746348347572 0.3949975 0.27728242 prediction 0.402964114579817 Functional Loss - ZNF485 ENSG00000198298 CDS Human protein_coding chr10:44112188 chr10:44112192 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_97660 0 0 1 UCHL5 POSTAR2 ENCODE chr10:44112176-44112325
64251 chr7 97800947 97800947 1 + C T LUSC 97800945 + 97800925 97800965 41 AGGATGGCGTGCGAGGTCGCCGCGGGGCTGGCCGCCATGCA AGGATGGCGTGCGAGGTCGCCGTGGGGCTGGCCGCCATGCA < 41bp 0.858363757679716 0.656885972843558 0.91577446 0.888438 prediction 0.402955569672316 Functional Loss - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97800945 chr7:97800947 nonsynonymous SNV 0.047 5 23 hm5C_associated_SNPs_97663 0 0 1 BUD13 POSTAR2 ENCODE chr7:97800919-97801001
64251 chr22 46709881 46709881 1 + G A rs6008622 46709878 + 46709858 46709898 41 GCCTGTTTGGAGCGGGGCATCCAGTGCGTGCACATCCCCAG GCCTGTTTGGAGCGGGGCATCCAATGCGTGCACATCCCCAG < 41bp 0.701477327148761 0.440987463468282 0.14000577 0.076194406 prediction 0.402954654297522 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46709878 chr22:46709881 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_97665 0 0 3 BUD13 POSTAR2 ENCODE chr22:46709862-46709960
64251 chr16 29859188 29859188 1 + G A LUSC 29859185 + 29859165 29859205 41 TTGGGCTGCTGGGGATGGGGCCCGAGGGTCAGCCCCTGGGC TTGGGCTGCTGGGGATGGGGCCCAAGGGTCAGCCCCTGGGC < 41bp 0.852677331984806 0.6512049462255 0.40260532 0.22612903 prediction 0.402944771518613 Functional Loss - MVP ENSG00000013364 CDS Human protein_coding chr16:29859185 chr16:29859188 nonsynonymous SNV 0.666 0 24 hm5C_associated_SNPs_97671 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29859157-29859194
64251 chr5 133482177 133482177 1 + G A rs148491817 133482174 + 133482154 133482194 41 GCAGCACCCTGCAGAGCACACAGGTACAGCAACAGGAATCT GCAGCACCCTGCAGAGCACACAGATACAGCAACAGGAATCT < 41bp 0.81293082799193 0.61145888999997 0.45608535 0.08401942 prediction 0.40294387598392 Functional Loss - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133482174 chr5:133482177 nonsynonymous SNV 0.767 2 24 hm5C_associated_SNPs_97672 0 0 1 IGF2BP1 POSTAR2 ENCODE chr5:133482111-133482178
64251 chr19 7535776 7535776 1 + G A rs139036553 7535773 + 7535753 7535793 41 GGGTCAGGGAATGAGCCAGGCACGGGGGCATGGGCAGAGAG GGGTCAGGGAATGAGCCAGGCACAGGGGCATGGGCAGAGAG < 41bp 0.701471693831046 0.454878762780243 0.28608 0.1754522 prediction 0.402943387662092 Functional Loss - ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7535773 chr19:7535776 . . 0 24 hm5C_associated_SNPs_97673 0 0 1 UPF1 POSTAR2 ENCODE chr19:7535729-7535807
64251 chrX 47074261 47074261 1 + A T LUSC 47074257 + 47074237 47074277 41 GCCACGTGCGGGCGCTGGTGCTTGAGCTGTGCTGTAACGAC GCCACGTGCGGGCGCTGGTGCTTGTGCTGTGCTGTAACGAC < 41bp 0.701469911439182 0.364734681519264 0.21020842 0.21235159 prediction 0.402939822878364 Functional Loss - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47074257 chrX:47074261 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_97676 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:47074227-47074278
64251 chr8 19218809 19218809 1 + G A UCEC 19218806 + 19218786 19218826 41 TGTAAGAGCTGGAAAGAAGACTCGGAATGGCAGGCATCTCG TGTAAGAGCTGGAAAGAAGACTCAGAATGGCAGGCATCTCG < 41bp 0.817237289965645 0.615769144094963 0.12104607 0.06046477 prediction 0.402936291741364 Functional Loss - SH2D4A ENSG00000104611 CDS Human protein_coding chr8:19218806 chr8:19218809 synonymous SNV . 0 24 hm5C_associated_SNPs_97679 0 0 4 BUD13 POSTAR2 ENCODE chr8:19218728-19218849
64251 chr3 10123070 10123070 1 + G A OV 10123067 + 10123047 10123087 41 TCACGGTGTAGTTGATGGACCAGGAGTGAAAGTTCAGGAGT TCACGGTGTAGTTGATGGACCAGAAGTGAAAGTTCAGGAGT < 41bp 0.701467626847474 0.457795043504162 0.43966073 0.28221157 prediction 0.402935253694949 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10123067 chr3:10123070 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_97680 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10123029-10123103
64251 chr8 26509811 26509811 1 + C T UCEC 26509809 + 26509789 26509829 41 TCTTTGAAGGCATGGAGTGCCGCGGCTCCCCACTGGTGGTC TCTTTGAAGGCATGGAGTGCCGTGGCTCCCCACTGGTGGTC < 41bp 0.864538181167224 0.663082350824216 0.2677587 0.15480924 prediction 0.402911660686017 Functional Loss - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26509809 chr8:26509811 synonymous SNV . 0 23 hm5C_associated_SNPs_97687 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:26509798-26509817
64251 chr1 93575798 93575798 1 + G A LGG 93575795 + 93575775 93575815 41 TTCTCTAAACAGAGACTCTACAGGGGCAGGTAATTCACTGG TTCTCTAAACAGAGACTCTACAGAGGCAGGTAATTCACTGG < 41bp 0.766148274063052 0.564695072369883 0.9084445 0.83267146 prediction 0.402906403386338 Functional Loss - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93575795 chr1:93575798 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_97692 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:93575788-93575814
64251 chr1 220773197 220773197 1 + C T LUSC 220773195 + 220773175 220773215 41 CTCTATTTAGTCATGGAATACGCGAGTGGGGGTAAGAATGA CTCTATTTAGTCATGGAATACGTGAGTGGGGGTAAGAATGA < 41bp 0.701451700791496 0.410356388339795 0.17185414 0.08253014 prediction 0.402903401582993 Functional Loss - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220773195 chr1:220773197 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_97693 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:220773181-220773226
64251 chr1 37946015 37946015 1 + G A CESC 37946012 + 37945992 37946032 41 GGAGGAAGGAGCAGCCTCGGCCCGACGTGCCCATCACAGGT GGAGGAAGGAGCAGCCTCGGCCCAACGTGCCCATCACAGGT < 41bp 0.701445273349338 0.445399290638759 0.1635027 0.11746928 prediction 0.402890546698675 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37946012 chr1:37946015 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_97700 0 0 2 BUD13 POSTAR2 ENCODE chr1:37946013-37946091
64251 chr9 91041471 91041471 1 + G T LUAD 91041469 + 91041449 91041489 41 AGATGAATGAAGACCCCATTCGGAAAGACACCTGGCCAGCG AGATGAATGAAGACCCCATTCGTAAAGACACCTGGCCAGCG < 41bp 0.916947745884833 0.715503395335703 0.86956406 0.2050808 prediction 0.40288870109826 Functional Loss - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91041469 chr9:91041471 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_97702 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:91041438-91041479
64251 chr19 4433484 4433484 1 + C T UCEC 4433481 + 4433461 4433501 41 CATCTCGCTGAAGAGGAAGTCAGCGGGCAGCATGTGCATCA CATCTCGCTGAAGAGGAAGTCAGTGGGCAGCATGTGCATCA < 41bp 0.736618236068069 0.535180571070588 0.7140945 0.2701341 prediction 0.402875329994961 Functional Loss - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4433481 chr19:4433484 nonsynonymous SNV 0.881 2 24 hm5C_associated_SNPs_97709 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:4433468-4433510
64251 chr10 92631778 92631778 1 + G A rs11544145 92631775 + 92631755 92631795 41 TGCAGATTTGGACCTGCGAGCGGGTTCTGACCTGAAGGCTC TGCAGATTTGGACCTGCGAGCGGATTCTGACCTGAAGGCTC < 41bp 0.819311675262319 0.617875480343551 0.88012964 0.7257637 prediction 0.402872389837536 Functional Loss - RPP30 ENSG00000148688 CDS Human protein_coding chr10:92631775 chr10:92631778 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_97711 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:92631760-92631780
64251 chr2 63217928 63217928 1 + A T KIRC 63217924 + 63217904 63217944 41 CCACAGGTGGCAAATTCACCCTCCAGTGCTGCCCAGAAAGC CCACAGGTGGCAAATTCACCCTCCTGTGCTGCCCAGAAAGC < 41bp 0.701430603823626 0.362361699773336 0.90797323 0.0219495 prediction 0.402861207647251 Functional Loss - EHBP1 ENSG00000115504 CDS Human protein_coding chr2:63217924 chr2:63217928 nonsynonymous SNV 0.817 2 25 hm5C_associated_SNPs_97721 0 0 4 FASTKD2 POSTAR2 ENCODE chr2:63217924-63217941
64251 chr15 49170772 49170772 1 + G A UCEC 49170769 + 49170749 49170789 41 GCCGCTCTTGAAGAAGCCGACAAGATGTTTCTGAGAACAAG GCCGCTCTTGAAGAAGCCGACAAAATGTTTCTGAGAACAAG < 41bp 0.796855902986894 0.595426830020868 0.8198521 0.42914847 prediction 0.402858145932051 Functional Loss - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170769 chr15:49170772 synonymous SNV . 0 24 hm5C_associated_SNPs_97725 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:49170758-49170789
64251 chr11 65829404 65829404 1 + C T GBM 65829401 + 65829381 65829421 41 CCCCATGGCTGATTGCCATGCAGCGATATGGACCACCCCCA CCCCATGGCTGATTGCCATGCAGTGATATGGACCACCCCCA < 41bp 0.751175071356545 0.549746655325968 0.20476198 0.3810869 prediction 0.402856832061154 Functional Loss - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65829401 chr11:65829404 stopgain 1.000 1 24 hm5C_associated_SNPs_97727 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65829391-65829420
64251 chr19 35769912 35769912 1 + C T UCEC 35769909 + 35769889 35769929 41 GGGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGACCTTC GGGAGTTGCGCCAGACCAACCAGTGCATGCAGGAGACCTTC < 41bp 0.740182235135043 0.538754120094085 0.7833375 0.77566296 prediction 0.402856230081915 Functional Loss - USF2 ENSG00000105698 CDS Human protein_coding chr19:35769909 chr19:35769912 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_97728 0 0 2 GRWD1 POSTAR2 ENCODE chr19:35769851-35769974
64251 chr10 73767332 73767332 1 + C T PAAD 73767329 + 73767309 73767349 41 TTCGAGCCGGGGGGCGCCAACGCCGCGGGCTCGGCCCTGGT TTCGAGCCGGGGGGCGCCAACGCTGCGGGCTCGGCCCTGGT < 41bp 0.740626430160692 0.539199434529323 0.8350496 0.53184956 prediction 0.402853991262738 Functional Loss - CHST3 ENSG00000122863 CDS Human protein_coding chr10:73767329 chr10:73767332 synonymous SNV . 0 24 hm5C_associated_SNPs_97730 4 0 1 SND1 POSTAR2 ENCODE chr10:73767295-73767348
64251 chr6 42996885 42996885 1 + G T UCEC 42996882 + 42996862 42996902 41 TTCAAGGAGCTGAAACGCAGCAAGAAATTGGAGAACTTCTT TTCAAGGAGCTGAAACGCAGCAATAAATTGGAGAACTTCTT < 41bp 0.701415783346108 0.32344460376021 0.41576606 0.56453717 prediction 0.402831566692217 Functional Loss - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42996882 chr6:42996885 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_97736 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42996840-42996900
64251 chr19 1080344 1080344 1 + G C rs145609436 1080341 + 1080321 1080361 41 GGGAGCCCCCCAGAAGAAGGCGGGTGCACTGAGGGCACACC GGGAGCCCCCCAGAAGAAGGCGGCTGCACTGAGGGCACACC < 41bp 0.711315745169852 0.509902915438012 0.89436734 0.76596785 prediction 0.402825659463679 Functional Loss - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1080341 chr19:1080344 synonymous SNV . 0 24 hm5C_associated_SNPs_97742 0 0 1 DDX24 POSTAR2 ENCODE chr19:1080278-1080378
64251 chr1 166819226 166819226 1 + G A BRCA 166819223 + 166819203 166819243 41 AAGCAGCGAGGGATGCTGATCTTGAATGGCTTCCGGGGCCA AAGCAGCGAGGGATGCTGATCTTAAATGGCTTCCGGGGCCA < 41bp 0.821714088896454 0.620303677194274 0.22926053 0.14609072 prediction 0.402820823404358 Functional Loss - POGK ENSG00000143157 CDS Human protein_coding chr1:166819223 chr1:166819226 synonymous SNV . 0 24 hm5C_associated_SNPs_97746 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:166819220-166819260
64251 chr2 241569885 241569885 1 + C T ESCA 241569882 + 241569862 241569902 41 AGCACCCGGCACAATTTCAACTCCATGGCGTTCCCGCTGCT AGCACCCGGCACAATTTCAACTCTATGGCGTTCCCGCTGCT < 41bp 0.757542980809663 0.556135817179619 0.95402366 0.940366 prediction 0.402814327260088 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569882 chr2:241569885 synonymous SNV . 0 24 hm5C_associated_SNPs_97748 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241569863-241569888
64251 chr17 79640744 79640744 1 + G A rs188798292 79640741 + 79640721 79640761 41 GGAACTGAGAAGCACCTCTGCCCGGCCCCCACACCGTGTGG GGAACTGAGAAGCACCTCTGCCCAGCCCCCACACCGTGTGG < 41bp 0.701404476456851 0.475087033522106 0.19988894 0.17682695 prediction 0.402808952913701 Functional Loss - CCDC137 ENSG00000185298 UTR3 Human protein_coding chr17:79640741 chr17:79640744 . . 0 24 hm5C_associated_SNPs_97750 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:79640731-79640749
64251 chr4 139966125 139966125 1 + G A UCEC 139966122 + 139966102 139966142 41 CCATGACATTGAAAACCAACCAGGTGGCCATTGCACAGACC CCATGACATTGAAAACCAACCAGATGGCCATTGCACAGACC < 41bp 0.701399828465006 0.460834076507267 0.8367938 0.2091507 prediction 0.402799656930012 Functional Loss - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966122 chr4:139966125 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_97754 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:139966083-139966145
64251 chr13 103524735 103524735 1 + G A UCEC 103524732 + 103524712 103524752 41 TTCTGTGGGGGAAACCTGATCTCGACAAAATTAGAGAATAT TTCTGTGGGGGAAACCTGATCTCAACAAAATTAGAGAATAT < 41bp 0.794017437768073 0.592620763843628 0.26446757 0.17948806 prediction 0.402793347848891 Functional Loss - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103524732 chr13:103524735 nonsynonymous SNV 0.604 1 24 hm5C_associated_SNPs_97757 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr13:103524716-103524735
64251 chr16 67154014 67154014 1 + G T LUAD 67154012 + 67153992 67154032 41 ATAGGTGTCTTGCTTTATTTCAGGAATGCCTCTGGCTCAGG ATAGGTGTCTTGCTTTATTTCATGAATGCCTCTGGCTCAGG < 41bp 0.701394409568892 0.352692322310511 0.8982974 0.39597973 prediction 0.402788819137785 Functional Loss - C16orf70 ENSG00000125149 splicing Human protein_coding chr16:67154012 chr16:67154014 . 1.000 0 23 hm5C_associated_SNPs_97759 0 0 3 DDX3X POSTAR2 ENCODE chr16:67154012-67154034
64251 chr9 130870087 130870087 1 + C T rs10987876 130870085 + 130870065 130870105 41 CCTTGCAGCCAGCTGTTGGCCACGGCCCCTGCCCTCTGGTC CCTTGCAGCCAGCTGTTGGCCATGGCCCCTGCCCTCTGGTC < 41bp 0.793159706081655 0.591767373189117 0.13789448 0.096078396 prediction 0.402784665785076 Functional Loss - SLC25A25 ENSG00000148339 UTR3 Human protein_coding chr9:130870085 chr9:130870087 . . 0 23 hm5C_associated_SNPs_97764 0 0 5 FXR2 POSTAR2 ENCODE chr9:130870083-130870117
64251 chr18 56390338 56390338 1 + C T OV 56390336 + 56390316 56390356 41 ATTACCGGGAGCACCCCAAGCTCAAAGCTCCTTTGGTGGAT ATTACCGGGAGCACCCCAAGCTTAAAGCTCCTTTGGTGGAT < 41bp 0.701388617745734 0.386083098160286 0.72863877 0.367414 prediction 0.402777235491468 Functional Loss - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56390336 chr18:56390338 synonymous SNV . 0 23 hm5C_associated_SNPs_97765 0 0 5 MBNL2 POSTAR2 GSE68890,GSM1685417 chr18:56390320-56390340
64251 chr19 50363264 50363264 1 + T C LIHC 50363263 + 50363243 50363283 41 GCCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGAT GCCGGCTGCGTGCACTTTTCCCACAAAGCATCGTGTGAGAT < 41bp 0.701385762783618 0.43041560313864 0.30572355 0.023399174 prediction 0.402771525567237 Functional Loss - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50363263 chr19:50363264 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_97769 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50363243-50363270
64251 chr16 4431256 4431256 1 + C T CESC 4431254 + 4431234 4431274 41 CCTTCCGTGGCCTGCGGCGCCTCGAGCGCCTCTACCTGGGC CCTTCCGTGGCCTGCGGCGCCTTGAGCGCCTCTACCTGGGC < 41bp 0.866061292299959 0.664683817001701 0.39969558 0.22594932 prediction 0.402754950596516 Functional Loss - VASN ENSG00000168140 CDS Human protein_coding chr16:4431254 chr16:4431256 synonymous SNV . 0 23 hm5C_associated_SNPs_97773 0 0 2 IGF2BP1 POSTAR2 ENCODE chr16:4431142-4431260
64251 chr19 49621224 49621224 1 + G T UCEC 49621221 + 49621201 49621241 41 AGTGCTGGAGGAGATGGAGGCCCGGTTCGAGAAGATGCGCT AGTGCTGGAGGAGATGGAGGCCCTGTTCGAGAAGATGCGCT < 41bp 0.701376034247967 0.312344834436478 0.21533892 0.1393446 prediction 0.402752068495933 Functional Loss - LIN7B ENSG00000104863 CDS Human protein_coding chr19:49621221 chr19:49621224 nonsynonymous SNV 0.985 3 24 hm5C_associated_SNPs_97774 0 0 1 PPIG POSTAR2 ENCODE chr19:49621114-49621267
64251 chr1 87805767 87805767 1 + C T BRCA 87805765 + 87805745 87805785 41 ACCTGCCGGAATCGCCTGGTCCCGGGAGATCGGTTTCACTA ACCTGCCGGAATCGCCTGGTCCTGGGAGATCGGTTTCACTA < 41bp 0.701375671109557 0.408731495566538 0.124147415 0.23798224 prediction 0.402751342219114 Functional Loss - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805765 chr1:87805767 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_97776 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr7 5334561 5334561 1 + G A SKCM 5334558 + 5334538 5334578 41 TACACGCAGGGGGTGATGACCGGGGAGAGTGAGTATCTGCA TACACGCAGGGGGTGATGACCGGAGAGAGTGAGTATCTGCA < 41bp 0.826344076919562 0.62496849394856 0.93931985 0.9238805 prediction 0.402751165942005 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5334558 chr7:5334561 synonymous SNV . 0 24 hm5C_associated_SNPs_97777 0 0 2 PRPF8 POSTAR2 ENCODE chr7:5334560-5334638
64251 chr1 60309119 60309119 1 + G T UCEC 60309116 + 60309096 60309136 41 TTTCTTAGGTGACTACACTTCAAGATGAAAAGAATTCACTG TTTCTTAGGTGACTACACTTCAATATGAAAAGAATTCACTG < 41bp 0.70137452689386 0.34021406970311 0.82195127 0.2386553 prediction 0.402749053787719 Functional Loss - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60309116 chr1:60309119 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_97779 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:60309119-60309120
64251 chr12 118457484 118457484 1 + G T LIHC 118457480 + 118457460 118457500 41 CGACTGCCACACTTGCTTCTCTACGGTCCCCCAGGGACAGG CGACTGCCACACTTGCTTCTCTACTGTCCCCCAGGGACAGG < 41bp 0.719232947340787 0.517858937592316 0.13470617 0.033308238 prediction 0.402748019496943 Functional Loss - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118457480 chr12:118457484 nonsynonymous SNV 0.994 5 25 hm5C_associated_SNPs_97780 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:118457457-118457489
64251 chr17 7579313 7579313 1 - G A HNSC 7579315 - 7579295 7579335 41 ACAGCCAAGTCTGTGACTTGCACGGTCAGTTGCCCTGAGGG ACAGCCAAGTCTGTGACTTGCATGGTCAGTTGCCCTGAGGG < 41bp 0.81299058755366 0.611619169295129 0.29939675 0.33422285 prediction 0.402742836517062 Functional Loss - TP53 ENSG00000141510 CDS Human protein_coding chr17:7579315 chr17:7579313 nonsynonymous SNV 0.986 5 23 hm5C_associated_SNPs_97782 23 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:7579300-7579320
64251 chr19 4224495 4224495 1 + G T OV 4224491 + 4224471 4224511 41 AGATGCAGAGACTCCAGGCTCAGGGCCGCTGAGAAAGGCCA AGATGCAGAGACTCCAGGCTCAGGTCCGCTGAGAAAGGCCA < 41bp 0.721292325050524 0.519928397565998 0.91695726 0.6643351 prediction 0.402727854969053 Functional Loss - ANKRD24 ENSG00000089847 CDS Human protein_coding chr19:4224491 chr19:4224495 nonsynonymous SNV 0.972 3 25 hm5C_associated_SNPs_97789 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:4224472-4224501
64251 chr2 176958133 176958133 1 + G A CESC 176958130 + 176958110 176958150 41 GGAGAAGTACATGGACGTGTCAGGCCTGGCGAGCAGCAGCG GGAGAAGTACATGGACGTGTCAGACCTGGCGAGCAGCAGCG < 41bp 0.838720256657953 0.637357168031988 0.4038254 0.25566053 prediction 0.40272617725193 Functional Loss - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176958130 chr2:176958133 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_97790 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176958106-176958143
64251 chr3 52521685 52521685 1 + C T UCEC 52521683 + 52521663 52521703 41 CAGGGCAGTATCCGCCAGTTCGCCGCCTGCCTTGTGCTCAC CAGGGCAGTATCCGCCAGTTCGTCGCCTGCCTTGTGCTCAC < 41bp 0.701361085939485 0.426949273950379 0.189293 0.14465722 prediction 0.40272217187897 Functional Loss - NISCH ENSG00000010322 CDS Human protein_coding chr3:52521683 chr3:52521685 nonsynonymous SNV 0.710 3 23 hm5C_associated_SNPs_97791 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr3:52521671-52521701
64251 chr20 18297168 18297168 1 + G T LUAD 18297164 + 18297144 18297184 41 ACATGTGCAGGCAGTGTGGACTGGGCTTTGGCAATAAGTCA ACATGTGCAGGCAGTGTGGACTGGTCTTTGGCAATAAGTCA < 41bp 0.707417200694445 0.506057239576466 0.36697727 0.1862061 prediction 0.402719922235958 Functional Loss - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297164 chr20:18297168 nonsynonymous SNV 0.745 4 25 hm5C_associated_SNPs_97794 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:18297146-18297169
64251 chr17 20107712 20107712 1 + G T LIHC 20107709 + 20107689 20107729 41 GGAATTTTCAGTAACTGTCTCAAGAGAGAGGTCTGTGCCAC GGAATTTTCAGTAACTGTCTCAATAGAGAGGTCTGTGCCAC < 41bp 0.701358300941957 0.315416867245177 0.35158837 0.050184876 prediction 0.402716601883913 Functional Loss - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20107709 chr17:20107712 nonsynonymous SNV 0.964 3 24 hm5C_associated_SNPs_97796 0 0 1 RBM15 POSTAR2 ENCODE chr17:20107712-20107830
64251 chr1 246797828 246797828 1 + G T UCEC 246797826 + 246797806 246797846 41 AGTTACGGCTCTAAGGAATTCAGAAAAGGGATTTAATGGTG AGTTACGGCTCTAAGGAATTCATAAAAGGGATTTAATGGTG < 41bp 0.701357682546419 0.365590549813361 0.35590315 0.15772787 prediction 0.402715365092837 Functional Loss - CNST ENSG00000162852 CDS Human protein_coding chr1:246797826 chr1:246797828 stopgain 0.999 0 23 hm5C_associated_SNPs_97797 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:246797820-246797840
64251 chr19 11352346 11352346 1 + G T SARC 11352342 + 11352322 11352362 41 ATCTCCCTCCCCAGACTCCACACAGCGGCGCTCCCAGCCTG ATCTCCCTCCCCAGACTCCACACATCGGCGCTCCCAGCCTG < 41bp 0.701356412611339 0.495249206065534 0.038478404 0.02467668 prediction 0.402712825222679 Functional Loss - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11352342 chr19:11352346 nonsynonymous SNV 0.893 1 25 hm5C_associated_SNPs_97798 0 0 1 SF3A3 POSTAR2 ENCODE chr19:11352269-11352360
64251 chr20 61443915 61443915 1 + C T UCEC 61443912 + 61443892 61443932 41 AAGGTGGAGGAGGAAGGAAGCCCCGGGGACCCCGACCACGA AAGGTGGAGGAGGAAGGAAGCCCTGGGGACCCCGACCACGA < 41bp 0.714382423546454 0.513027135715245 0.35253787 0.24328381 prediction 0.402710575662418 Functional Loss - OGFR ENSG00000060491 CDS Human protein_coding chr20:61443912 chr20:61443915 synonymous SNV . 0 24 hm5C_associated_SNPs_97800 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr20:61443900-61443920
64251 chr2 178301583 178301583 1 + A C HNSC 178301579 + 178301559 178301599 41 AAACTAATATTTCATATTCACAAGAGGCAGATGATCGAGTA AAACTAATATTTCATATTCACAAGCGGCAGATGATCGAGTA < 41bp 0.701353432357868 0.312810375963602 0.4028424 0.22250634 prediction 0.402706864715736 Functional Loss - AGPS ENSG00000018510 CDS Human protein_coding chr2:178301579 chr2:178301583 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_97803 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:178301573-178301609
64251 chr15 57731149 57731149 1 + G A SKCM 57731146 + 57731126 57731166 41 ACAGGTTTTTACTGGATGATCAGGAATGTGCCATCCATGCC ACAGGTTTTTACTGGATGATCAGAAATGTGCCATCCATGCC < 41bp 0.84092944634607 0.63958105702432 0.8503836 0.48846942 prediction 0.402696778643499 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57731146 chr15:57731149 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97805 0 0 1 GRWD1 POSTAR2 ENCODE chr15:57731133-57731181
64251 chr16 90103743 90103743 1 + G A COAD 90103740 + 90103720 90103760 41 GGCAGACCCTCTCCAGAAGGCTCGGGAGGAGATGAGCGAGA GGCAGACCCTCTCCAGAAGGCTCAGGAGGAGATGAGCGAGA < 41bp 0.807045091631541 0.605698425365698 0.4150129 0.37662855 prediction 0.402693332531685 Functional Loss - GAS8 ENSG00000141013 CDS Human protein_coding chr16:90103740 chr16:90103743 nonsynonymous SNV 0.198 0 24 hm5C_associated_SNPs_97809 0 0 7 GRWD1 POSTAR2 ENCODE chr16:90103699-90103798
64251 chr16 4557977 4557977 1 + C T KIRP 4557975 + 4557955 4557995 41 TGGTGGCCCATGCATACACCCGCTACATGGGGGATCTCTCG TGGTGGCCCATGCATACACCCGTTACATGGGGGATCTCTCG < 41bp 0.701337299604991 0.412806263130749 0.5880223 0.45581776 prediction 0.402674599209982 Functional Loss - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4557975 chr16:4557977 synonymous SNV . 0 23 hm5C_associated_SNPs_97815 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:4557960-4557980
64251 chr1 173806113 173806113 1 + T C GBM 173806112 + 173806092 173806132 41 TTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCTCTCC TTTAGTACCATCCAGGGAACCCGGAAAGTTTTATTCTCTCC < 41bp 0.835072707680985 0.633737752057107 0.29344064 0.28309637 prediction 0.402669911247755 Functional Loss - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173806112 chr1:173806113 synonymous SNV . 0 22 hm5C_associated_SNPs_97818 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:173806089-173806114
64251 chr15 75949560 75949560 1 + C T rs147095150 75949557 + 75949537 75949577 41 GCATGTATGACAACCTCTGACCGCGTGTGCCTGGGCCCCCT GCATGTATGACAACCTCTGACCGTGTGTGCCTGGGCCCCCT < 41bp 0.715565069806601 0.514240182176683 0.3626431 0.39572588 prediction 0.402649775259836 Functional Loss - SNX33 ENSG00000173548 UTR3 Human protein_coding chr15:75949557 chr15:75949560 . . 0 24 hm5C_associated_SNPs_97825 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585674 chr15:75949540-75949560
64251 chr17 43246457 43246457 1 + C T COAD 43246454 + 43246434 43246474 41 GTGGTTCCCTGCCCCTGACACCGCGGATGGAGAGCCACTCA GTGGTTCCCTGCCCCTGACACCGTGGATGGAGAGCCACTCA < 41bp 0.731058814975728 0.52973450284444 0.5801301 0.31887335 prediction 0.402648624262575 Functional Loss - HEXIM2 ENSG00000168517 CDS Human protein_coding chr17:43246454 chr17:43246457 nonsynonymous SNV 0.013 2 24 hm5C_associated_SNPs_97826 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:43246450-43246478
64251 chr17 21730847 21730847 1 + G T BLCA 21730843 + 21730823 21730863 41 GGCTCATCTTTGCAGGCAAGCAGCGGGAAGATGGCCGCAGT GGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCAGT < 41bp 0.720667740345568 0.519344029843989 0.77556 0.88835824 prediction 0.402647421003158 Functional Loss - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21730843 chr17:21730847 nonsynonymous SNV 0.143 0 25 hm5C_associated_SNPs_97827 0 0 4 RBM15 POSTAR2 ENCODE chr17:21730829-21730871
64251 chrX 136649225 136649225 1 + C T UCEC 136649222 + 136649202 136649242 41 TTTCTGTTCCGCCAGCGCAGCTCCGGGCTCAGTGAGGCGGC TTTCTGTTCCGCCAGCGCAGCTCTGGGCTCAGTGAGGCGGC < 41bp 0.730318860933522 0.528995503476141 0.24021432 0.1856162 prediction 0.402646714914762 Functional Loss - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649222 chrX:136649225 synonymous SNV . 0 24 hm5C_associated_SNPs_97828 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chrX:136649207-136649233
64251 chr13 113803336 113803336 1 + C T UCEC 113803333 + 113803313 113803353 41 GAGACCTATGACTTCGACATCGCCGTGCTCCGGCTCAAGAC GAGACCTATGACTTCGACATCGCTGTGCTCCGGCTCAAGAC < 41bp 0.767391896078312 0.566069263703958 0.2153705 0.060456812 prediction 0.402645264748708 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113803333 chr13:113803336 nonsynonymous SNV 0.475 2 24 hm5C_associated_SNPs_97829 0 0 1 RPS3 POSTAR2 ENCODE chr13:113803327-113803360
64251 chr9 4679895 4679895 1 + C T UCEC 4679893 + 4679873 4679913 41 CCGCAGCTGCCAGGCGGCGGCGCCCAGGTGAGAAGGGGCCT CCGCAGCTGCCAGGCGGCGGCGTCCAGGTGAGAAGGGGCCT < 41bp 0.701320448377063 0.440209333755009 0.82536745 0.8535732 prediction 0.402640896754127 Functional Loss - CDC37L1 ENSG00000106993 CDS Human protein_coding chr9:4679893 chr9:4679895 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_97830 0 0 2 BUD13 POSTAR2 ENCODE chr9:4679800-4679905
64251 chr6 28134863 28134863 1 + G T UCEC 28134859 + 28134839 28134879 41 GCTCAGCCCTCATCAAGCATCAGAGAATCCATACAGGAGAA GCTCAGCCCTCATCAAGCATCAGATAATCCATACAGGAGAA < 41bp 0.701316923541239 0.491852916944101 0.2506825 0.21433195 prediction 0.402633847082479 Functional Loss - ZNF192P1 ENSG00000226314 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:28134859 chr6:28134863 . . 0 25 hm5C_associated_SNPs_97833 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:28134830-28134867
64251 chr10 85901358 85901358 1 + G C LGG 85901354 + 85901334 85901374 41 TGTTGTGAAGAATTCCATCACGAAGAATCAATGGCTGTTAA TGTTGTGAAGAATTCCATCACGAACAATCAATGGCTGTTAA < 41bp 0.701316672883894 0.41043119252323 0.17935884 0.03937763 prediction 0.402633345767788 Functional Loss - GHITM ENSG00000165678 CDS Human protein_coding chr10:85901354 chr10:85901358 nonsynonymous SNV 0.977 0 25 hm5C_associated_SNPs_97834 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:85901273-85901362
64251 chr20 43559220 43559220 1 + C T ACC 43559217 + 43559197 43559237 41 ATCGTGGGCACCAAGCCACTCTACGTGGCACTGGCCCAGCG ATCGTGGGCACCAAGCCACTCTATGTGGCACTGGCCCAGCG < 41bp 0.753517562382352 0.552201151907264 0.21160573 0.12877733 prediction 0.402632820950176 Functional Loss - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43559217 chr20:43559220 synonymous SNV . 0 24 hm5C_associated_SNPs_97835 0 0 8 GRWD1 POSTAR2 ENCODE chr20:43559192-43559246
64251 chr10 73992792 73992792 1 + G T LUAD 73992789 + 73992769 73992809 41 TGCTCGGATGGAAAAACTAGCTGGTTTGGTAGAAGAGCTGG TGCTCGGATGGAAAAACTAGCTGTTTTGGTAGAAGAGCTGG < 41bp 0.701314942851475 0.326467502795753 0.5591834 0.28458077 prediction 0.402629885702949 Functional Loss - ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73992789 chr10:73992792 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_97837 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:73992765-73992809
64251 chr8 20074768 20074768 1 + G A LUAD 20074765 + 20074745 20074785 41 CAATGTGCTGCCCTCACTATCACGGTTAATGAAGTCTGCTA CAATGTGCTGCCCTCACTATCACAGTTAATGAAGTCTGCTA < 41bp 0.818771695278164 0.617458052107137 0.9041303 0.8828012 prediction 0.402627286342053 Functional Loss - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20074765 chr8:20074768 nonsynonymous SNV 0.915 4 24 hm5C_associated_SNPs_97839 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:20074751-20074775
64251 chr6 160500620 160500620 1 + C T UCEC 160500618 + 160500598 160500638 41 TGGTTTTTGTCCAGGTGACTCGCGACTCGCGCACCTACAGC TGGTTTTTGTCCAGGTGACTCGTGACTCGCGCACCTACAGC < 41bp 0.70131318500355 0.435740627548889 0.69436884 0.2639347 prediction 0.4026263700071 Functional Loss - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160500618 chr6:160500620 synonymous SNV . 0 23 hm5C_associated_SNPs_97840 0 0 6 BUD13 POSTAR2 ENCODE chr6:160500600-160500635
64251 chrX 70444350 70444350 1 + C T COAD 70444347 + 70444327 70444367 41 GCTCCCTGAAAGACATACTGCGCCGCAGCCCTGGCACCGGG GCTCCCTGAAAGACATACTGCGCTGCAGCCCTGGCACCGGG < 41bp 0.734079550902784 0.532768537509629 0.1504975 0.14233321 prediction 0.402622026786309 Functional Loss - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444347 chrX:70444350 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_97841 0 0 4 RPS3 POSTAR2 ENCODE chrX:70444347-70444381
64251 chr2 242157737 242157737 1 + C T BLCA 242157735 + 242157715 242157755 41 CCCACGACCTGCGCGGCTTCCTCAACTTCACGCTGGCGCGA CCCACGACCTGCGCGGCTTCCTTAACTTCACGCTGGCGCGA < 41bp 0.861672457369431 0.660362571717914 0.40904242 0.23042887 prediction 0.402619771303034 Functional Loss - ANO7 ENSG00000146205 CDS Human protein_coding chr2:242157735 chr2:242157737 synonymous SNV . 0 23 hm5C_associated_SNPs_97842 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:242157720-242157745
64251 chr15 93536192 93536192 1 + G A UCEC 93536189 + 93536169 93536209 41 ACAGCTGTGTGTCAGCAATGCAGGAATACGAAGAGCAGCTG ACAGCTGTGTGTCAGCAATGCAGAAATACGAAGAGCAGCTG < 41bp 0.70130654053545 0.470261209670996 0.8944037 0.6579814 prediction 0.402613081070899 Functional Loss - CHD2 ENSG00000173575 CDS Human protein_coding chr15:93536189 chr15:93536192 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_97846 0 0 11 CSTF2 POSTAR2 GSE40859,GSM1003587 chr15:93536171-93536192
64251 chr1 233802387 233802387 1 + C T SARC 233802384 + 233802364 233802404 41 TCAGATGGAGGTAAGGCCTTCTGCATCATCTACTCCGTCAT TCAGATGGAGGTAAGGCCTTCTGTATCATCTACTCCGTCAT < 41bp 0.760371025128985 0.559069391066522 0.16000414 0.19049674 prediction 0.402603268124925 Functional Loss - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802384 chr1:233802387 synonymous SNV . 0 24 hm5C_associated_SNPs_97849 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:233802379-233802438
64251 chr22 50316312 50316312 1 + C T UCEC 50316309 + 50316289 50316329 41 GGCCTGACCAACAGAGACTGCGGCGAGTGTGAAGTGGGCTG GGCCTGACCAACAGAGACTGCGGTGAGTGTGAAGTGGGCTG < 41bp 0.744840728656665 0.543545362597803 0.6688422 0.4176257 prediction 0.402590732117725 Functional Loss - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50316309 chr22:50316312 synonymous SNV . 0 24 hm5C_associated_SNPs_97853 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr22:50316298-50316329
64251 chr3 40499482 40499482 1 + G T OV 40499479 + 40499459 40499499 41 GTAGATGTTATTGATCAGAACAGGGTAAGTGTCACAACTTT GTAGATGTTATTGATCAGAACAGTGTAAGTGTCACAACTTT < 41bp 0.701291021102309 0.32386467942531 0.8110789 0.32244182 prediction 0.402582042204618 Functional Loss - RPL14 ENSG00000188846 CDS Human protein_coding chr3:40499479 chr3:40499482 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_97859 0 0 8 GEMIN5 POSTAR2 ENCODE chr3:40499478-40499483
64251 chr2 10188670 10188670 1 + G A UCEC 10188667 + 10188647 10188687 41 GTATGCAGCTTCCCAGGTTGCCGGAAGACCTACTTCAAAAG GTATGCAGCTTCCCAGGTTGCCGAAAGACCTACTTCAAAAG < 41bp 0.701286526655547 0.457005236466592 0.37857622 0.1303123 prediction 0.402573053311093 Functional Loss - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188667 chr2:10188670 synonymous SNV . 0 24 hm5C_associated_SNPs_97864 0 0 2 RBM15 POSTAR2 ENCODE chr2:10188642-10188679
64251 chr2 24881613 24881613 1 + C T COAD 24881611 + 24881591 24881631 41 CTCACATAAGAGGAAAGGATCGCCATGTGACACACTGGCAT CTCACATAAGAGGAAAGGATCGTCATGTGACACACTGGCAT < 41bp 0.701281413117075 0.404578778154431 0.7377519 0.5111422 prediction 0.40256282623415 Functional Loss - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24881611 chr2:24881613 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_97866 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:24881598-24881621
64251 chr12 122628537 122628537 1 + C T rs12321299 122628535 + 122628515 122628555 41 TAACTCATTCTCTTGGTGCTCACGATTGCCATGGCCATAGG TAACTCATTCTCTTGGTGCTCATGATTGCCATGGCCATAGG < 41bp 0.719990808158282 0.518709461597014 0.20948896 0.24925458 prediction 0.402562693122534 Functional Loss - MLXIP ENSG00000175727 UTR3 Human protein_coding chr12:122628535 chr12:122628537 . . 0 23 hm5C_associated_SNPs_97867 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr12:122628413-122628542
64251 chr1 210027087 210027087 1 + C T rs114339116 210027085 + 210027065 210027105 41 GTTTCCATTATTACTATTCACACGACTCCCAAATCTCCAGC GTTTCCATTATTACTATTCACATGACTCCCAAATCTCCAGC < 41bp 0.701280329360392 0.477711129229854 0.007141918 0.031295717 prediction 0.402560658720784 Functional Loss - DIEXF ENSG00000117597 UTR3 Human protein_coding chr1:210027085 chr1:210027087 . . 0 23 hm5C_associated_SNPs_97868 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:210027065-210027088
64251 chr19 18307444 18307444 1 + G A rs145920498 18307441 + 18307421 18307461 41 CACCTGTAATCTCAGCCCTTCCCGAGGCTGAGGTGGAAGGA CACCTGTAATCTCAGCCCTTCCCAAGGCTGAGGTGGAAGGA < 41bp 0.776334456157449 0.575056627831569 0.89067847 0.6701591 prediction 0.40255565665176 Functional Loss - MPV17L2 ENSG00000254858 UTR3 Human protein_coding chr19:18307441 chr19:18307444 . . 0 24 hm5C_associated_SNPs_97872 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:18307426-18307453
64251 chr7 66104099 66104099 1 + G A UCEC 66104096 + 66104076 66104116 41 GACCTGCTGCACTGCCTGGTCACGGACCTCTCGGCCCAGGG GACCTGCTGCACTGCCTGGTCACAGACCTCTCGGCCCAGGG < 41bp 0.813997059214512 0.612720677229918 0.33160383 0.16554126 prediction 0.402552763969189 Functional Loss - KCTD7 ENSG00000243335 CDS Human protein_coding chr7:66104096 chr7:66104099 synonymous SNV . 0 24 hm5C_associated_SNPs_97873 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:66104081-66104108
64251 chr20 37383680 37383680 1 + G A STAD 37383677 + 37383657 37383697 41 TCCCATTTTCCAGCAAGCTCCTGGGCAGCACTCTGACCTCT TCCCATTTTCCAGCAAGCTCCTGAGCAGCACTCTGACCTCT < 41bp 0.70127589087585 0.449588977227623 0.3767357 0.1400055 prediction 0.4025517817517 Functional Loss - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37383677 chr20:37383680 nonsynonymous SNV 0.992 2 24 hm5C_associated_SNPs_97874 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:37383653-37383691
64251 chr1 76254912 76254912 1 + G A BLCA 76254909 + 76254889 76254929 41 GGTCTGACAGTAATGGATCTCATGGGACAACTTCATCGCAT GGTCTGACAGTAATGGATCTCATAGGACAACTTCATCGCAT < 41bp 0.769210954838144 0.567941574182608 0.20437264 0.052229285 prediction 0.402538761311073 Functional Loss - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76254909 chr1:76254912 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_97877 0 0 30 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:76254808-76254957
64251 chr9 82335097 82335097 1 + C T GBM 82335095 + 82335075 82335115 41 ATCAAGGCAGAGCTGACATCCTCGGCCCCCGCCTGCTATGC ATCAAGGCAGAGCTGACATCCTTGGCCCCCGCCTGCTATGC < 41bp 0.869149713420806 0.667881055626239 0.096170306 0.10148883 prediction 0.402537315589134 Functional Loss - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82335095 chr9:82335097 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_97878 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:82335073-82335098
64251 chr5 139928534 139928534 1 + G A COAD 139928531 + 139928511 139928551 41 CGAAAGTTCCTGCTGGAGTGCAAGAACTCACCCATTGCCCG CGAAAGTTCCTGCTGGAGTGCAAAAACTCACCCATTGCCCG < 41bp 0.7012682016905 0.454755095043397 0.053900003 0.0229446 prediction 0.402536403381 Functional Loss - ANKHD1-EIF4EBP3;EIF4EBP3 ENSG00000131503;ENSG00000243056;ENSG00000254996 CDS Human other chr5:139928531 chr5:139928534 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_97879 0 0 2 GRWD1 POSTAR2 ENCODE chr5:139928516-139928607
64251 chr22 32894270 32894270 1 + C T LUSC 32894267 + 32894247 32894287 41 ATTTCCTAGCTCCCGCCTTCCTCCAGGAATTATCGGGGGTG ATTTCCTAGCTCCCGCCTTCCTCTAGGAATTATCGGGGGTG < 41bp 0.778956658046177 0.577690366075468 0.9438812 0.6928398 prediction 0.402532583941419 Functional Loss - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32894267 chr22:32894270 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_97881 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr22:32894235-32894276
64251 chr19 54656195 54656195 1 + C T UCEC 54656192 + 54656172 54656212 41 CCTGAGCAGTACATCAGCACCTCCGGCCTCAGCCCAGCCGC CCTGAGCAGTACATCAGCACCTCTGGCCTCAGCCCAGCCGC < 41bp 0.791383242047471 0.590118427344647 0.26171523 0.2860669 prediction 0.40252962940565 Functional Loss - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656192 chr19:54656195 nonsynonymous SNV 0.905 3 24 hm5C_associated_SNPs_97883 0 0 1 UCHL5 POSTAR2 ENCODE chr19:54656179-54656210
64251 chr2 233321725 233321725 1 + G T LUAD 233321723 + 233321703 233321743 41 GTGCAGCCGCCCGCTTTAACCAGTGCAACACGACACGCGGC GTGCAGCCGCCCGCTTTAACCATTGCAACACGACACGCGGC < 41bp 0.701262562612096 0.339531605232285 0.81450164 0.088456005 prediction 0.402525125224192 Functional Loss - ALPI ENSG00000163295 CDS Human protein_coding chr2:233321723 chr2:233321725 nonsynonymous SNV 0.303 2 23 hm5C_associated_SNPs_97888 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:233321720-233321760
64251 chr21 48068520 48068520 1 + C T STAD 48068518 + 48068498 48068538 41 TCTCTTCTGTGCACACTATGCGCGGCCTAGAGCGGTGAGTG TCTCTTCTGTGCACACTATGCGTGGCCTAGAGCGGTGAGTG < 41bp 0.851951500774702 0.650689179468475 0.43893784 0.3944667 prediction 0.402524642612453 Functional Loss - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48068518 chr21:48068520 nonsynonymous SNV 0.002 3 23 hm5C_associated_SNPs_97889 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:48068499-48068527
64251 chrX 30671556 30671556 1 + C T rs564283960 30671554 + 30671534 30671574 41 GTCCGAGCGTTCAGCGGACGCGCGCGGCCTCGATCTCTGGA GTCCGAGCGTTCAGCGGACGCGTGCGGCCTCGATCTCTGGA < 41bp 0.79425991537108 0.592997679828614 0.4208506 0.4711152 prediction 0.402524471084932 Functional Loss - GK ENSG00000198814 UTR5 Human protein_coding chrX:30671554 chrX:30671556 . . 0 23 hm5C_associated_SNPs_97890 0 0 1 GRWD1 POSTAR2 ENCODE chrX:30671539-30671584
64251 chr3 58486719 58486719 1 + C T UCEC 58486716 + 58486696 58486736 41 TGTAGGTGGACACTTGTATACAACGTCTCTCACCACATTGA TGTAGGTGGACACTTGTATACAATGTCTCTCACCACATTGA < 41bp 0.72168456053674 0.520424671646558 0.060619473 0.07902256 prediction 0.402519777780364 Functional Loss - KCTD6 ENSG00000168301 CDS Human protein_coding chr3:58486716 chr3:58486719 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_97891 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:58486693-58486722
64251 chr22 46724721 46724721 1 + A C KIRP 46724717 + 46724697 46724737 41 GAGGAAAGCGATTCTACTTTCTCCAAAAGTACTGCCACAGA GAGGAAAGCGATTCTACTTTCTCCCAAAGTACTGCCACAGA < 41bp 0.701253786412447 0.262109552967919 0.9681549 0.0796265 prediction 0.402507572824893 Functional Loss - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46724717 chr22:46724721 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_97897 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:46724695-46724731
64251 chr19 45411139 45411139 1 + C T STAD 45411136 + 45411116 45411156 41 TGGGTCGCTTTTGGGATTACCTGCGCTGGGTGCAGACACTG TGGGTCGCTTTTGGGATTACCTGTGCTGGGTGCAGACACTG < 41bp 0.747132234638792 0.545879122539555 0.8967807 0.78251797 prediction 0.402506224198473 Functional Loss - APOE ENSG00000130203 CDS Human protein_coding chr19:45411136 chr19:45411139 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_97898 0 0 17 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:45411120-45411160
64251 chr1 40954867 40954867 1 + C T STAD 40954864 + 40954844 40954884 41 CGAGAGGTGATGCTGGAGAACTACAGCAACTTGGTGTCAGT CGAGAGGTGATGCTGGAGAACTATAGCAACTTGGTGTCAGT < 41bp 0.793167243728871 0.591916568024893 0.92354536 0.55326617 prediction 0.402501351407958 Functional Loss - ZFP69 ENSG00000187815 CDS Human protein_coding chr1:40954864 chr1:40954867 synonymous SNV . 0 24 hm5C_associated_SNPs_97900 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:40954840-40954874
64251 chr10 102747853 102747853 1 + T C rs548146118 102747852 + 102747832 102747872 41 CATGGAGAGAAAGAATGCACCTAGAGTGAGCTCTGCAGAGT CATGGAGAGAAAGAATGCACCCAGAGTGAGCTCTGCAGAGT < 41bp 0.715974541295783 0.514727437822188 0.14253706 0.18462503 prediction 0.40249420694719 Functional Loss - TWNK ENSG00000107815 UTR5 Human protein_coding chr10:102747852 chr10:102747853 . . 0 22 hm5C_associated_SNPs_97902 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:102747832-102747853
64251 chr3 50222138 50222138 1 + G T SARC 50222136 + 50222116 50222156 41 ACCAGGCCGTGTACCCTCTGCAGCGGCGGCCCCTGGTAGTC ACCAGGCCGTGTACCCTCTGCATCGGCGGCCCCTGGTAGTC < 41bp 0.701246995691009 0.336041831836958 0.55749166 0.16052744 prediction 0.402493991382019 Functional Loss - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50222136 chr3:50222138 nonsynonymous SNV 0.994 1 23 hm5C_associated_SNPs_97903 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:50222114-50222186
64251 chr20 55966522 55966522 1 + G C rs8115097 55966521 + 55966501 55966541 41 GCGCACGGCGGGACGGGCGCCGGAGTGGTCGGGCCTGGCGG GCGCACGGCGGGACGGGCGCCCGAGTGGTCGGGCCTGGCGG < 41bp 0.851411719952944 0.650168380620747 0.91264856 0.7476537 prediction 0.402486678664395 Functional Loss - RBM38 ENSG00000218018 ncRNA_intronic Human antisense chr20:55966521 chr20:55966522 . . 0 22 hm5C_associated_SNPs_97906 0 0 3 DDX3X POSTAR2 ENCODE chr20:55966514-55966582
64251 chr6 26124800 26124800 1 + G T PAAD 26124796 + 26124776 26124816 41 GGCGGCGTCCTTCCTAACATCCAGGCCGTGCTTCTGCCTAA GGCGGCGTCCTTCCTAACATCCAGTCCGTGCTTCTGCCTAA < 41bp 0.715109979747053 0.513869538930342 0.2599225 0.06679639 prediction 0.402480881633422 Functional Loss - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124796 chr6:26124800 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_97908 0 0 39 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26124720-26124820
64251 chr8 121463542 121463542 1 + G A STAD 121463539 + 121463519 121463559 41 GAAGAAGAAGACAGTAATAGCAGGGAATCATTATCCTTGGC GAAGAAGAAGACAGTAATAGCAGAGAATCATTATCCTTGGC < 41bp 0.804059713181605 0.602821236665744 0.90887976 0.86850035 prediction 0.402476953031721 Functional Loss - MTBP ENSG00000172167 CDS Human protein_coding chr8:121463539 chr8:121463542 synonymous SNV . 0 24 hm5C_associated_SNPs_97910 0 0 3 DDX24 POSTAR2 ENCODE chr8:121463516-121463565
64251 chr1 107599749 107599749 1 + G A LUAD 107599746 + 107599726 107599766 41 AGGACCGGGTGCACGTCCTGCCGGGACCAGTGGAGACTGTA AGGACCGGGTGCACGTCCTGCCGAGACCAGTGGAGACTGTA < 41bp 0.701237835299792 0.461472354179963 0.6703027 0.5550402 prediction 0.402475670599585 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599746 chr1:107599749 nonsynonymous SNV 0.851 3 24 hm5C_associated_SNPs_97911 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:107599716-107599752
64251 chr1 107599750 107599750 1 + G T STAD 107599746 + 107599726 107599766 41 AGGACCGGGTGCACGTCCTGCCGGGACCAGTGGAGACTGTA AGGACCGGGTGCACGTCCTGCCGGTACCAGTGGAGACTGTA < 41bp 0.701237835299792 0.481824448398029 0.6703027 0.17796773 prediction 0.402475670599585 Functional Loss - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107599746 chr1:107599750 nonsynonymous SNV 0.818 3 25 hm5C_associated_SNPs_97912 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:107599716-107599752
64251 chr19 49674941 49674941 1 + G A LUSC 49674938 + 49674918 49674958 41 CCTGGAAGACACTCTGGCCCCAGGGAGTGGGGGAGCCAGGC CCTGGAAGACACTCTGGCCCCAGAGAGTGGGGGAGCCAGGC < 41bp 0.8227286901127 0.621491229528356 0.876529 0.45495898 prediction 0.402474921168687 Functional Loss - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49674938 chr19:49674941 nonsynonymous SNV 0.887 1 24 hm5C_associated_SNPs_97913 0 0 2 PPIG POSTAR2 ENCODE chr19:49674891-49674955
64251 chr10 105203743 105203743 1 + C T PRAD 105203740 + 105203720 105203760 41 AAAGCTGTGTGGATCAAATACGGCGCCTTCCTTCTGCGGAG AAAGCTGTGTGGATCAAATACGGTGCCTTCCTTCTGCGGAG < 41bp 0.731492309239972 0.53026243763413 0.8533994 0.8015897 prediction 0.402459743211684 Functional Loss - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203740 chr10:105203743 synonymous SNV . 0 24 hm5C_associated_SNPs_97919 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:105203736-105203755
64251 chr1 26881142 26881142 1 + C T SKCM 26881139 + 26881119 26881159 41 GAGAAGAAGGCCTATTCTTTCTGCGGGACAGTGGAGTACAT GAGAAGAAGGCCTATTCTTTCTGTGGGACAGTGGAGTACAT < 41bp 0.79033397931661 0.589111562875691 0.29475328 0.30348933 prediction 0.402444832881838 Functional Loss - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26881139 chr1:26881142 synonymous SNV . 0 24 hm5C_associated_SNPs_97924 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:26881129-26881149
64251 chr19 55997079 55997079 1 + G C UCEC 55997075 + 55997055 55997095 41 GGCCGGGGCCTGGGGGTTGCCATGGCCCCCAGCCACCTGTC GGCCGGGGCCTGGGGGTTGCCATGCCCCCCAGCCACCTGTC < 41bp 0.74391575067861 0.542693565419161 0.79357636 0.35527736 prediction 0.402444370518899 Functional Loss - NAT14 ENSG00000090971 CDS Human protein_coding chr19:55997075 chr19:55997079 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_97925 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:55997020-55997120
64251 chr2 220368861 220368861 1 + C T STAD 220368858 + 220368838 220368878 41 ATCAGTGACATCATCAACTGCGGCATCTACCTCTTTTCTCC ATCAGTGACATCATCAACTGCGGTATCTACCTCTTTTCTCC < 41bp 0.762497929463465 0.561283179568717 0.2770229 0.1994375 prediction 0.402429499789495 Functional Loss - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220368858 chr2:220368861 synonymous SNV . 0 24 hm5C_associated_SNPs_97930 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:220368833-220368869
64251 chr16 2011630 2011630 1 + G A SKCM 2011627 + 2011607 2011647 41 ACCCAGGTGGCCAAGGCCTACCAGGACCGCTGTGCGTGCCC ACCCAGGTGGCCAAGGCCTACCAAGACCGCTGTGCGTGCCC < 41bp 0.701213017035649 0.457160935725932 0.24192452 0.1187579 prediction 0.402426034071298 Functional Loss - NDUFB10 ENSG00000140990 CDS Human protein_coding chr16:2011627 chr16:2011630 synonymous SNV . 0 24 hm5C_associated_SNPs_97931 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:2011544-2011631
64251 chr19 50905074 50905074 1 + G A rs1726801 50905071 + 50905051 50905091 41 GCCTGGGGGGCCCCCACCATCCCGCGGCTCCGTGCCTGTGC GCCTGGGGGGCCCCCACCATCCCACGGCTCCGTGCCTGTGC < 41bp 0.701210159564602 0.441305558595022 0.31475613 0.07124466 prediction 0.402420319129204 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905071 chr19:50905074 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_97934 1 0 2 EFTUD2 POSTAR2 ENCODE chr19:50905034-50905088
64251 chr19 50905073 50905073 1 + C T HNSC 50905071 + 50905051 50905091 41 GCCTGGGGGGCCCCCACCATCCCGCGGCTCCGTGCCTGTGC GCCTGGGGGGCCCCCACCATCCTGCGGCTCCGTGCCTGTGC < 41bp 0.701210159564602 0.450679054059913 0.31475613 0.049554646 prediction 0.402420319129204 Functional Loss - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905071 chr19:50905073 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_97935 2 0 2 EFTUD2 POSTAR2 ENCODE chr19:50905034-50905088
64251 chr19 58117437 58117437 1 + G T COAD 58117435 + 58117415 58117455 41 GAGGGACTTTTCAGCCACCTCAGGACTTCTCCAGCATCAGG GAGGGACTTTTCAGCCACCTCATGACTTCTCCAGCATCAGG < 41bp 0.909835290842989 0.708625685460751 0.3795578 0.014973313 prediction 0.402419210764476 Functional Loss - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117435 chr19:58117437 stopgain 0.000 0 23 hm5C_associated_SNPs_97936 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:58117420-58117440
64251 chr6 44274746 44274746 1 - G A BRCA 44274749 - 44274729 44274769 41 GGCTGGTTCTTCGTCGGATCCTGCGTCGAGCTGTGCGTTTC GGCTGGTTCTTCGTCGGATCCTGTGTCGAGCTGTGCGTTTC < 41bp 0.784100894128547 0.582891384146392 0.24271336 0.1464661 prediction 0.402419019964309 Functional Loss - AARS2 ENSG00000124608;ENSG00000178233;ENSG00000272442 CDS Human other chr6:44274749 chr6:44274746 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_97937 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:44274735-44274760
64251 chr5 179250884 179250884 1 + C T rs139372286 179250881 + 179250861 179250901 41 AAAAAGAGTGCCGGCGGGACCACCGCCCACCGTGTGCTCAG AAAAAGAGTGCCGGCGGGACCACTGCCCACCGTGTGCTCAG < 41bp 0.777904444394564 0.576699824141085 0.26425484 0.16301405 prediction 0.402409240506958 Functional Loss - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179250881 chr5:179250884 nonsynonymous SNV 0.904 4 24 hm5C_associated_SNPs_97939 0 0 6 FXR2 POSTAR2 GSE39682,GSM977620 chr5:179250859-179250885
64251 chr16 28507877 28507877 1 + G T LUAD 28507873 + 28507853 28507893 41 GAGAGGGAGCAGCAGGGATCCAGTGGCTGAGCTGCCCTCAG GAGAGGGAGCAGCAGGGATCCAGTTGCTGAGCTGCCCTCAG < 41bp 0.725586571608491 0.524388648430161 0.9029473 0.9029239 prediction 0.402395846356659 Functional Loss - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507873 chr16:28507877 synonymous SNV . 0 25 hm5C_associated_SNPs_97941 0 0 1 DGCR8 POSTAR2 ENCODE chr16:28507833-28507877
64251 chr5 135394834 135394834 1 + G T HNSC 135394832 + 135394812 135394852 41 ACCACATTGGTGATGAAATCCTGGTTAGCGGAGGCATCGGG ACCACATTGGTGATGAAATCCTTGTTAGCGGAGGCATCGGG < 41bp 0.701195342693315 0.349910170916943 0.359285 0.08907947 prediction 0.402390685386631 Functional Loss - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135394832 chr5:135394834 synonymous SNV . 0 23 hm5C_associated_SNPs_97943 0 0 7 EIF3H POSTAR2 ENCODE chr5:135394818-135394890
64251 chr21 35172208 35172208 1 + C T UCEC 35172206 + 35172186 35172226 41 TCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACAT TCCAGAAGCCATGATGAAATCATTATCCAGCCAGGAGACAT < 41bp 0.701187169202079 0.451628135744616 0.024813533 0.038318545 prediction 0.402374338404158 Functional Loss - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35172206 chr21:35172208 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_97949 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:35172144-35172217
64251 chr15 65822897 65822897 1 + G C rs563538139 65822896 + 65822876 65822916 41 TTTGAGGCCTGCTTTCTGCTCGCGCCAGCAGAGCACTACCT TTTGAGGCCTGCTTTCTGCTCCCGCCAGCAGAGCACTACCT < 41bp 0.701184159289541 0.42563421007785 0.23992005 0.10316527 prediction 0.402368318579082 Functional Loss - HACD3 ENSG00000074696 UTR5 Human protein_coding chr15:65822896 chr15:65822897 . . 0 22 hm5C_associated_SNPs_97951 0 0 22 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:65822800-65822960
64251 chr6 33656066 33656066 1 + C T LUSC 33656063 + 33656043 33656083 41 CAGATCGTGTTCCCAGTGCCCGGCATCTGCCAGTTCCTGAC CAGATCGTGTTCCCAGTGCCCGGTATCTGCCAGTTCCTGAC < 41bp 0.701637677819609 0.500455375414083 0.42495632 0.38164634 prediction 0.402364604811051 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33656063 chr6:33656066 synonymous SNV . 0 24 hm5C_associated_SNPs_97953 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33656058-33656080
64251 chr16 2546267 2546267 1 + C T CESC 2546265 + 2546245 2546285 41 GCAGGAACTGAAGCAGCTGGCGCGCCAGGGCTACTGGGCCC GCAGGAACTGAAGCAGCTGGCGTGCCAGGGCTACTGGGCCC < 41bp 0.701179069632865 0.432162988555826 0.60273063 0.61199754 prediction 0.40235813926573 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546265 chr16:2546267 nonsynonymous SNV 0.977 4 23 hm5C_associated_SNPs_97958 1 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2546251-2546270
64251 chr16 2546268 2546268 1 + G A HNSC 2546265 + 2546245 2546285 41 GCAGGAACTGAAGCAGCTGGCGCGCCAGGGCTACTGGGCCC GCAGGAACTGAAGCAGCTGGCGCACCAGGGCTACTGGGCCC < 41bp 0.701179069632865 0.4554890147885 0.60273063 0.48639047 prediction 0.40235813926573 Functional Loss - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546265 chr16:2546268 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_97959 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:2546251-2546270
64251 chr5 137520619 137520619 1 + C T PRAD 137520616 + 137520596 137520636 41 AGATGGTAGAACAGATGCAACAGCGGGAACAGTGGTGCAGG AGATGGTAGAACAGATGCAACAGTGGGAACAGTGGTGCAGG < 41bp 0.701177417960356 0.478327211673833 0.8583075 0.7723256 prediction 0.402354835920713 Functional Loss - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137520616 chr5:137520619 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_97960 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:137520588-137520623
64251 chr2 71365756 71365756 1 + G T LUSC 71365754 + 71365734 71365774 41 CTACACTTTGACCATGCTGTCCGGATGGGTATGGTGCCCTC CTACACTTTGACCATGCTGTCCTGATGGGTATGGTGCCCTC < 41bp 0.91714958479693 0.715978213075767 0.3891137 0.14631215 prediction 0.402342743442325 Functional Loss - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71365754 chr2:71365756 nonsynonymous SNV 0.062 4 23 hm5C_associated_SNPs_97963 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:71365735-71365757
64251 chr2 153575403 153575403 1 + G T UCEC 153575399 + 153575379 153575419 41 CCCGTTCTGCCCGATAAGCGCAATGGTATCTTTCCCGCGGC CCCGTTCTGCCCGATAAGCGCAATTGTATCTTTCCCGCGGC < 41bp 0.701170497534273 0.494511378461409 0.30205345 0.2054171 prediction 0.402340995068545 Functional Loss - ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575399 chr2:153575403 nonsynonymous SNV 0.796 4 25 hm5C_associated_SNPs_97964 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:153575400-153575420
64251 chr16 23701310 23701310 1 + C T UCEC 23701307 + 23701287 23701327 41 GCTGCAAGGAGCTGGCCAGCCGGCTCCGCTACGCCCGCACT GCTGCAAGGAGCTGGCCAGCCGGTTCCGCTACGCCCGCACT < 41bp 0.722253444883303 0.521086329573007 0.3761508 0.21373576 prediction 0.402334230620593 Functional Loss - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23701307 chr16:23701310 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_97967 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr16:23701290-23701316
64251 chr3 170141045 170141045 1 + G A UCEC 170141042 + 170141022 170141062 41 CTGACTGTTCTTCCCTGCATCCGGATGGGCCAGGAGCCCGG CTGACTGTTCTTCCCTGCATCCGAATGGGCCAGGAGCCCGG < 41bp 0.822612159234235 0.621445172687165 0.7515207 0.39812282 prediction 0.402333973094139 Functional Loss - CLDN11 ENSG00000013297 CDS Human protein_coding chr3:170141042 chr3:170141045 synonymous SNV . 0 24 hm5C_associated_SNPs_97968 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:170141045-170141074
64251 chr20 33511177 33511177 1 + G A COAD 33511174 + 33511154 33511194 41 TGCGCACAGTCTATGGGAACCACGAACGCTTTGAGACAACC TGCGCACAGTCTATGGGAACCACAAACGCTTTGAGACAACC < 41bp 0.701166606477327 0.466555625491453 0.23126116 0.27059144 prediction 0.402333212954654 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33511174 chr20:33511177 nonsynonymous SNV 0.935 0 24 hm5C_associated_SNPs_97969 0 0 3 PRPF8 POSTAR2 ENCODE chr20:33511113-33511182
64251 chr20 33511176 33511176 1 + C T OV 33511174 + 33511154 33511194 41 TGCGCACAGTCTATGGGAACCACGAACGCTTTGAGACAACC TGCGCACAGTCTATGGGAACCATGAACGCTTTGAGACAACC < 41bp 0.701166606477327 0.400131034936844 0.23126116 0.26445812 prediction 0.402333212954654 Functional Loss - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33511174 chr20:33511176 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_97970 0 0 3 PRPF8 POSTAR2 ENCODE chr20:33511113-33511182
64251 chr3 160138558 160138558 1 + G C BLCA 160138557 + 160138537 160138577 41 GGAGCCATTGATGAAAAATACGACGTGGCTATATCATCCTG GGAGCCATTGATGAAAAATACCACGTGGCTATATCATCCTG < 41bp 0.701160754527584 0.3916317982558 0.08531541 0.037138015 prediction 0.402321509055168 Functional Loss - SMC4 ENSG00000113810 CDS Human protein_coding chr3:160138557 chr3:160138558 nonsynonymous SNV 0.634 5 22 hm5C_associated_SNPs_97980 0 0 22 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:160138520-160138560
64251 chr3 160138560 160138560 1 + C T STAD 160138557 + 160138537 160138577 41 GGAGCCATTGATGAAAAATACGACGTGGCTATATCATCCTG GGAGCCATTGATGAAAAATACGATGTGGCTATATCATCCTG < 41bp 0.701160754527584 0.481583750162404 0.08531541 0.03469014 prediction 0.402321509055168 Functional Loss - SMC4 ENSG00000113810 CDS Human protein_coding chr3:160138557 chr3:160138560 synonymous SNV . 0 24 hm5C_associated_SNPs_97981 0 0 23 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:160138520-160138560
64251 chr1 228334627 228334627 1 + T C COAD 228334626 + 228334606 228334646 41 ATGCCGAGTTCTCGGGGAACCTGTATGGCACGAGGTGGGCC ATGCCGAGTTCTCGGGGAACCCGTATGGCACGAGGTGGGCC < 41bp 0.829255028103338 0.628095782765484 0.40845215 0.28767014 prediction 0.402318490675708 Functional Loss - GUK1 ENSG00000143774 CDS Human protein_coding chr1:228334626 chr1:228334627 nonsynonymous SNV 0.925 4 22 hm5C_associated_SNPs_97982 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:228334601-228334628
64251 chr6 25726722 25726722 1 - G A UCEC 25726724 - 25726704 25726744 41 AGGGAAGCAGGGAGGAAAAGCACGCGCCAAGTCTAAGTCTC AGGGAAGCAGGGAGGAAAAGCATGCGCCAAGTCTAAGTCTC < 41bp 0.783976728512884 0.582818624520052 0.21947041 0.10130277 prediction 0.402316207985665 Functional Loss - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726724 chr6:25726722 nonsynonymous SNV 0.007 3 23 hm5C_associated_SNPs_97984 0 0 1 SUB1 POSTAR2 ENCODE chr6:25726685-25726745
64251 chr7 133164850 133164850 1 + G A UCEC 133164847 + 133164827 133164867 41 TCAGTATGAGCGCCTATCTGCGAGAACAGAGAAGGGAGCTC TCAGTATGAGCGCCTATCTGCGAAAACAGAGAAGGGAGCTC < 41bp 0.751966396504954 0.550812767020742 0.28108287 0.11400902 prediction 0.402307258968424 Functional Loss - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133164847 chr7:133164850 nonsynonymous SNV 0.987 4 24 hm5C_associated_SNPs_97990 0 0 10 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr7:133164840-133164860
64251 chr12 113826365 113826365 1 + C T UCEC 113826362 + 113826342 113826382 41 CAGTGGAGCACCTCGCCCTTCAGCGGCCTGCTGCACATGGG CAGTGGAGCACCTCGCCCTTCAGTGGCCTGCTGCACATGGG < 41bp 0.72288291003999 0.521731979285262 0.58316267 0.26728243 prediction 0.402301861509456 Functional Loss - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113826362 chr12:113826365 synonymous SNV . 0 24 hm5C_associated_SNPs_97993 0 0 3 RPS3 POSTAR2 ENCODE chr12:113826310-113826381
64251 chr9 130576119 130576119 1 + A C rs545528620 130576118 + 130576098 130576138 41 CCCCGGGTCTCTCACTGTTGCAGTGGCCTGGCCGTTCAGCC CCCCGGGTCTCTCACTGTTGCCGTGGCCTGGCCGTTCAGCC < 41bp 0.701148539292289 0.435494236678026 0.8523147 0.74388856 prediction 0.402297078584579 Functional Loss - FPGS ENSG00000136877 UTR3 Human protein_coding chr9:130576118 chr9:130576119 . . 0 22 hm5C_associated_SNPs_97995 0 0 6 DDX55 POSTAR2 ENCODE chr9:130576094-130576157
64251 chr22 50280910 50280910 1 + C T rs573398477 50280908 + 50280888 50280928 41 GGTCTATGACCCGCTCTGCCCACGGCTGTGTACGACATCAG GGTCTATGACCCGCTCTGCCCATGGCTGTGTACGACATCAG < 41bp 0.795696876788721 0.594550311062904 0.5804933 0.4201899 prediction 0.402293131451633 Functional Loss - ZBED4 ENSG00000100426 UTR3 Human protein_coding chr22:50280908 chr22:50280910 . . 0 23 hm5C_associated_SNPs_97996 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr22:50280875-50280917
64251 chr4 110763764 110763764 1 + C T rs145995401 110763761 + 110763741 110763781 41 TCCACTGTTTGCAAAATCTTCTACATTCTATAACCCCTGCA TCCACTGTTTGCAAAATCTTCTATATTCTATAACCCCTGCA < 41bp 0.751723367143655 0.550578024258487 0.24269757 0.072292 prediction 0.402290685770337 Functional Loss - RRH ENSG00000180245 CDS Human protein_coding chr4:110763761 chr4:110763764 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_97998 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:110763751-110763779
64251 chr1 32646028 32646028 1 + G C BLCA 32646027 + 32646007 32646047 41 GGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGGCC GGACAACCGGAAGCAGGACCCCAGGGAGCCCAGGAGCGGCC < 41bp 0.898312905709187 0.6971710019789 0.8967527 0.6941794 prediction 0.402283807460575 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32646027 chr1:32646028 nonsynonymous SNV 0.755 0 22 hm5C_associated_SNPs_98001 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:32645980-32646040
64251 chr21 37716908 37716908 1 + G T UCEC 37716905 + 37716885 37716925 41 CAGTATATTATATCTAAAGCCAAGAATGCAGATCATCCTAC CAGTATATTATATCTAAAGCCAATAATGCAGATCATCCTAC < 41bp 0.70114095119549 0.324227040566815 0.20973685 0.87498784 prediction 0.402281902390981 Functional Loss - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37716905 chr21:37716908 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98002 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:37716887-37716912
64251 chr4 184233578 184233578 1 + C T SKCM 184233575 + 184233555 184233595 41 TCTCCAAGGACGTGTGTCGGCTCCGGGAGCAGAGCCAGAAG TCTCCAAGGACGTGTGTCGGCTCTGGGAGCAGAGCCAGAAG < 41bp 0.798534236186158 0.597393292739408 0.8587153 0.5980029 prediction 0.4022818868935 Functional Loss - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184233575 chr4:184233578 nonsynonymous SNV 0.905 4 24 hm5C_associated_SNPs_98003 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr4:184233560-184233578
64251 chr11 8710507 8710507 1 + G A rs561018442 8710504 + 8710484 8710524 41 GACCGGACCTTGGGTCTTACCCCGGCACCTGAGAACCACTT GACCGGACCTTGGGTCTTACCCCAGCACCTGAGAACCACTT < 41bp 0.774647493967242 0.573507280870005 0.38801 0.25955635 prediction 0.402280426194473 Functional Loss - RPL27A ENSG00000166441 UTR3 Human protein_coding chr11:8710504 chr11:8710507 . . 0 24 hm5C_associated_SNPs_98005 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8710440-8710514
64251 chrX 100093269 100093269 1 + G T ACC 100093266 + 100093246 100093286 41 GTTCTACAACTGACTGCAGACCAGATTGCCATGTTGCCTCC GTTCTACAACTGACTGCAGACCATATTGCCATGTTGCCTCC < 41bp 0.701140109506175 0.313994810107646 0.16624281 0.028590292 prediction 0.402280219012351 Functional Loss - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100093266 chrX:100093269 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98006 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:100093252-100093275
64251 chr10 101090189 101090189 1 + C T COAD 101090187 + 101090167 101090207 41 CTGCCCCTACTCAGTGTGTTCGCGGCACGGGCTGGCCATCG CTGCCCCTACTCAGTGTGTTCGTGGCACGGGCTGGCCATCG < 41bp 0.842722825252658 0.641585335138862 0.60185045 0.41666088 prediction 0.402274980227592 Functional Loss - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101090187 chr10:101090189 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_98007 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr10:101090164-101090200
64251 chr3 89498473 89498473 1 + G A SKCM 89498470 + 89498450 89498490 41 TGGAGTTATGGGATTGTTCTCTGGGAGGTGATGTCTTATGG TGGAGTTATGGGATTGTTCTCTGAGAGGTGATGTCTTATGG < 41bp 0.798957831263875 0.597821187852557 0.54271096 0.22650954 prediction 0.402273286822635 Functional Loss - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89498470 chr3:89498473 stopgain 1.000 1 24 hm5C_associated_SNPs_98008 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:89498454-89498479
64251 chr6 54735313 54735313 1 + G A SKCM 54735310 + 54735290 54735330 41 CTGTGATGATACCTTATCTTCAGGGACCTACTGGCCTGTTG CTGTGATGATACCTTATCTTCAGAGACCTACTGGCCTGTTG < 41bp 0.827091578408983 0.625956606000759 0.9176351 0.87823635 prediction 0.402269944816447 Functional Loss - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54735310 chr6:54735313 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_98010 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:54735304-54735316
64251 chr17 73488749 73488749 1 + C T UCEC 73488746 + 73488726 73488766 41 CTGCTGAACCTGTGTGATGCCAGCGTCACCGAGCGCCTGTG CTGCTGAACCTGTGTGATGCCAGTGTCACCGAGCGCCTGTG < 41bp 0.750877451125516 0.549748117115066 0.39084905 0.20725447 prediction 0.402258668020899 Functional Loss - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73488746 chr17:73488749 synonymous SNV . 0 24 hm5C_associated_SNPs_98016 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:73488749-73488750
64251 chr12 6630174 6630174 1 + G A rs139063293 6630171 + 6630151 6630191 41 GAAAGGCCATCATTCTCACTCGAGAAGCCACAGGCCACTTC GAAAGGCCATCATTCTCACTCGAAAAGCCACAGGCCACTTC < 41bp 0.825919659871858 0.624790678371326 0.86164767 0.41869333 prediction 0.402257963001064 Functional Loss - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6630171 chr12:6630174 nonsynonymous SNV 0.851 0 24 hm5C_associated_SNPs_98017 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6630153-6630181
64251 chr12 124241408 124241408 1 + C T COAD 124241406 + 124241386 124241426 41 TGCTGATGCGCGTGGGCCTCCGCGTTGACACCACCTATGGC TGCTGATGCGCGTGGGCCTCCGTGTTGACACCACCTATGGC < 41bp 0.701128036714937 0.41252667061916 0.46632016 0.5164708 prediction 0.402256073429873 Functional Loss - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124241406 chr12:124241408 synonymous SNV . 0 23 hm5C_associated_SNPs_98018 0 0 1 PUM2 POSTAR2 ENCODE chr12:124241379-124241409
64251 chr1 248020722 248020722 1 + G C rs531789979 248020721 + 248020701 248020741 41 GGGCGGCGTCTACGCCTGTCCGCAGTGCCGGGGCCCCTTCC GGGCGGCGTCTACGCCTGTCCCCAGTGCCGGGGCCCCTTCC < 41bp 0.898750704493336 0.697623819456882 0.36666042 0.06970161 prediction 0.402253770072907 Functional Loss - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248020721 chr1:248020722 synonymous SNV . 0 22 hm5C_associated_SNPs_98019 0 0 2 DDX42 POSTAR2 ENCODE chr1:248020714-248020880
64251 chr2 65217251 65217251 1 + G A rs374368836 65217248 + 65217228 65217268 41 AGCGACCTGGGGCTGGAGGACTCGGGGCCTCCTCCTGTCCC AGCGACCTGGGGCTGGAGGACTCAGGGCCTCCTCCTGTCCC < 41bp 0.811779485268152 0.610653055758142 0.76880014 0.16106752 prediction 0.402252859020022 Functional Loss - SLC1A4 ENSG00000115902 CDS Human protein_coding chr2:65217248 chr2:65217251 synonymous SNV . 0 24 hm5C_associated_SNPs_98020 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:65217250-65217251
64251 chr11 118499019 118499019 1 + C T ESCA 118499016 + 118498996 118499036 41 TGGCAGAGAGTCCTCGGCCCCGGCGCTGGGCAGCCCATGGG TGGCAGAGAGTCCTCGGCCCCGGTGCTGGGCAGCCCATGGG < 41bp 0.701125480463199 0.487285120357579 0.51068866 0.49137855 prediction 0.402250960926398 Functional Loss - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118499016 chr11:118499019 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_98021 0 0 1 EIF3H POSTAR2 ENCODE chr11:118498992-118499023
64251 chr3 101476691 101476691 1 + C T SKCM 101476688 + 101476668 101476708 41 GCCAGTTGCATCAGGACTGTCTCCACTATCACCTACAGTTG GCCAGTTGCATCAGGACTGTCTCTACTATCACCTACAGTTG < 41bp 0.806034103366228 0.604913469228326 0.9267229 0.7647811 prediction 0.402241268275803 Functional Loss - CEP97 ENSG00000182504 CDS Human protein_coding chr3:101476688 chr3:101476691 nonsynonymous SNV 0.814 4 24 hm5C_associated_SNPs_98026 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:101476629-101476704
64251 chr7 295837 295837 1 + C T SARC 295834 + 295814 295854 41 GCCAACAACATCTGCTTCTACGGCGAGTGTTCCTACTACTG GCCAACAACATCTGCTTCTACGGTGAGTGTTCCTACTACTG < 41bp 0.720264374609925 0.519144058014378 0.32818672 0.27295843 prediction 0.402240633191094 Functional Loss - FAM20C ENSG00000177706 CDS Human protein_coding chr7:295834 chr7:295837 synonymous SNV . 0 24 hm5C_associated_SNPs_98027 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:295823-295850
64251 chr19 3612253 3612253 1 - C T UCEC 3612256 - 3612236 3612276 41 GCAAGCCGCGCTTCTTCAACCGCGTGCACACGGGCTTCGAG GCAAGCCGCGCTTCTTCAACCGCATGCACACGGGCTTCGAG < 41bp 0.701109993750038 0.460094357732449 0.73148173 0.0898312 prediction 0.402219987500075 Functional Loss - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612256 chr19:3612253 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_98039 0 0 1 ZNF622 POSTAR2 ENCODE chr19:3612214-3612309
64251 chr13 49039375 49039375 1 + G A UCEC 49039372 + 49039352 49039392 41 GTCACCAATACCTCACATTCCTCGAAGCCCTTACAAGTTTC GTCACCAATACCTCACATTCCTCAAAGCCCTTACAAGTTTC < 41bp 0.797093517959416 0.595984139874401 0.5593939 0.3462705 prediction 0.402218756170031 Functional Loss - RB1 ENSG00000139687 CDS Human protein_coding chr13:49039372 chr13:49039375 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98040 2 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr13:49039352-49039375
64251 chr8 28575593 28575593 1 + G A BLCA 28575590 + 28575570 28575610 41 TGGTGATGTTGACTTATGAGCGGGAGGAAGTGCTTATGAAC TGGTGATGTTGACTTATGAGCGGAAGGAAGTGCTTATGAAC < 41bp 0.701105458888083 0.454250659079836 0.91137254 0.87311816 prediction 0.402210917776166 Functional Loss - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575590 chr8:28575593 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98043 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr8:28575495-28575623
64251 chr22 39414793 39414793 1 + G A rs576155458 39414790 + 39414770 39414810 41 TGAGCCCAGGAGTTCCAGACCAGGCTGGGTCACATGACAAA TGAGCCCAGGAGTTCCAGACCAGACTGGGTCACATGACAAA < 41bp 0.701105380012146 0.492421250285582 0.27463794 0.13342714 prediction 0.402210760024292 Functional Loss - APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414790 chr22:39414793 . . 0 24 hm5C_associated_SNPs_98044 0 0 7 DROSHA POSTAR2 ENCODE chr22:39414756-39414793
64251 chr10 91178298 91178298 1 + G T COAD 91178295 + 91178275 91178315 41 CCCTAGGGTTTGTTTACAAGCTGGAAGGAGAAAAGAGGCAA CCCTAGGGTTTGTTTACAAGCTGTAAGGAGAAAAGAGGCAA < 41bp 0.929487147682719 0.728382555858012 0.20603967 0.06815499 prediction 0.402209183649415 Functional Loss - IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91178295 chr10:91178298 stopgain 0.003 0 24 hm5C_associated_SNPs_98045 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714641 chr10:91178251-91178322
64251 chr19 2810256 2810256 1 + G A rs77130102 2810253 + 2810233 2810273 41 ACGGGCCAGGCCGGCGGGAACGGGCTAGGCAGGACCTGGGC ACGGGCCAGGCCGGCGGGAACGGACTAGGCAGGACCTGGGC < 41bp 0.819161178565857 0.61806286397907 0.90214556 0.73650914 prediction 0.402196629173574 Functional Loss - THOP1 ENSG00000172009 UTR5 Human protein_coding chr19:2810253 chr19:2810256 . . 0 24 hm5C_associated_SNPs_98050 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:2810240-2810260
64251 chr1 53675717 53675717 1 + G A HNSC 53675714 + 53675694 53675734 41 GTTTGATATGTACCTATCTGCTCGAGACTCCGTTGTTCTGA GTTTGATATGTACCTATCTGCTCAAGACTCCGTTGTTCTGA < 41bp 0.701091991668882 0.481703383624061 0.49943715 0.2798757 prediction 0.402183983337764 Functional Loss - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53675714 chr1:53675717 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_98057 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:53675706-53675740
64251 chr16 14743705 14743705 1 + C T UCEC 14743703 + 14743683 14743723 41 GGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAG GGAGCAGCAGGGAATCTGAACATGACCTCCTGGTCCACAAG < 41bp 0.870695641294414 0.669605864602743 0.30279496 0.24439353 prediction 0.402179553383341 Functional Loss - BFAR ENSG00000103429 CDS Human protein_coding chr16:14743703 chr16:14743705 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_98058 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:14743679-14743718
64251 chr1 27676289 27676289 1 + G A rs145411679 27676286 + 27676266 27676306 41 GAGGGAGGGGACCCGGGCGGCCGGGGGGTGGACCCGTTCCG GAGGGAGGGGACCCGGGCGGCCGAGGGGTGGACCCGTTCCG < 41bp 0.830113896332564 0.629031505702476 0.90395904 0.78052515 prediction 0.402164781260176 Functional Loss - SYTL1 ENSG00000142765 intronic Human protein_coding chr1:27676286 chr1:27676289 . . 0 24 hm5C_associated_SNPs_98064 0 0 6 EFTUD2 POSTAR2 ENCODE chr1:27676278-27676324
64251 chr6 157963704 157963704 1 + C T UCEC 157963701 + 157963681 157963721 41 TTTGTGATGGGGACCCTGCTCCGCACCAGCTTCAGCGACCC TTTGTGATGGGGACCCTGCTCCGTACCAGCTTCAGCGACCC < 41bp 0.768154870171679 0.567073080429529 0.18146506 0.13761708 prediction 0.4021635794843 Functional Loss - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:157963701 chr6:157963704 synonymous SNV . 0 24 hm5C_associated_SNPs_98066 0 0 3 DDX3X POSTAR2 ENCODE chr6:157963685-157963757
64251 chr9 74526699 74526699 1 + C T LUAD 74526696 + 74526676 74526716 41 CTCGTTCCAGACCTCAGAAGCACCAGAATACGTTTAGCTTC CTCGTTCCAGACCTCAGAAGCACTAGAATACGTTTAGCTTC < 41bp 0.744382986906702 0.543302231941798 0.12899086 0.15943912 prediction 0.402161509929808 Functional Loss - C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526696 chr9:74526699 stopgain 1.000 1 24 hm5C_associated_SNPs_98067 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:74526644-74526704
64251 chr17 79213403 79213403 1 + G T rs374420845 79213399 + 79213379 79213419 41 CGGCAGGTGCGTGCAGGCCTCCACGGCCCCGGGCGGCCGCC CGGCAGGTGCGTGCAGGCCTCCACTGCCCCGGGCGGCCGCC < 41bp 0.709707313677921 0.508627958197787 0.41289645 0.3177793 prediction 0.402158710960267 Functional Loss - NDUFAF8 ENSG00000224877 CDS Human protein_coding chr17:79213399 chr17:79213403 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_98069 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:79213380-79213420
64251 chr1 150443383 150443383 1 + G T UCEC 150443379 + 150443359 150443399 41 AGTTACCATCTGCCAATCTTCAGAGGTCTCCAAGCCAAAGC AGTTACCATCTGCCAATCTTCAGATGTCTCCAAGCCAAAGC < 41bp 0.701078219024704 0.488809216113389 0.93201387 0.8650722 prediction 0.402156438049408 Functional Loss - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150443379 chr1:150443383 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_98070 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:150443370-150443391
64251 chr7 1132106 1132106 1 + C T COAD 1132103 + 1132083 1132123 41 TGCTGGTCAGGGCGCACCGGCACCGTGGGCTGCGGCCCCGG TGCTGGTCAGGGCGCACCGGCACTGTGGGCTGCGGCCCCGG < 41bp 0.72261887153088 0.521541781813732 0.29502124 0.15464407 prediction 0.402154179434296 Functional Loss - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1132103 chr7:1132106 nonsynonymous SNV 0.223 3 24 hm5C_associated_SNPs_98073 0 0 1 EIF3H POSTAR2 ENCODE chr7:1132074-1132129
64251 chr7 6769702 6769702 1 + G A UCEC 6769699 + 6769679 6769719 41 GGCGAAGGGGCGGCGGGAACCGGGCCTGGCCCGTGTGTGTC GGCGAAGGGGCGGCGGGAACCGGACCTGGCCCGTGTGTGTC < 41bp 0.793458728093111 0.592382875470356 0.90994334 0.89624053 prediction 0.402151705245511 Functional Loss - ZNF12;PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6769699 chr7:6769702 . . 0 24 hm5C_associated_SNPs_98074 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:6769702-6769703
64251 chr12 32480545 32480545 1 + G C LUAD 32480541 + 32480521 32480561 41 ATGAGGGGCCTGCAAAGCAGCAAGGAGCTCAAGGCTGAGCT ATGAGGGGCCTGCAAAGCAGCAAGCAGCTCAAGGCTGAGCT < 41bp 0.701073347452804 0.398433934589499 0.63850176 0.36882138 prediction 0.402146694905608 Functional Loss - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32480541 chr12:32480545 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_98076 0 0 1 EIF3H POSTAR2 ENCODE chr12:32480494-32480576
64251 chr7 150742700 150742700 1 + A C rs891506 150742699 + 150742679 150742719 41 AATGGGCAGAGACAGAGTTCCACGAGACACCTCCACTCTAT AATGGGCAGAGACAGAGTTCCCCGAGACACCTCCACTCTAT < 41bp 0.84192754642179 0.640856148823608 0.4065138 0.8936037 prediction 0.402142795196363 Functional Loss - ABCB8 ENSG00000197150 UTR3 Human protein_coding chr7:150742699 chr7:150742700 . . 0 22 hm5C_associated_SNPs_98077 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221667 chr7:150742700-150742720
64251 chr4 108931032 108931032 1 + G T UCEC 108931030 + 108931010 108931050 41 AGTGGCAAAGAAGAAGTTTGCAGAAAACCTTAAGGTAATTT AGTGGCAAAGAAGAAGTTTGCATAAAACCTTAAGGTAATTT < 41bp 0.701063028354305 0.367687006863438 0.2922271 0.0944463 prediction 0.402126056708609 Functional Loss - HADH ENSG00000138796 CDS Human protein_coding chr4:108931030 chr4:108931032 stopgain 0.997 1 23 hm5C_associated_SNPs_98083 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:108931009-108931032
64251 chr7 66420820 66420820 1 + C T rs76231377 66420818 + 66420798 66420838 41 GATTCCTGGATCTAGCTGGTCACGACGATGTTTTCACCAAG GATTCCTGGATCTAGCTGGTCATGACGATGTTTTCACCAAG < 41bp 0.839281167693231 0.638220283503869 0.29934412 0.27283055 prediction 0.402121768378724 Functional Loss - TMEM248 ENSG00000106609 UTR3 Human protein_coding chr7:66420818 chr7:66420820 . . 0 23 hm5C_associated_SNPs_98084 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:66420699-66420835
64251 chr12 57972099 57972099 1 + G A SKCM 57972096 + 57972076 57972116 41 TTTCCTTTCTTGAGAACAACCTGGAACAGCTTACAAAGGTT TTTCCTTTCTTGAGAACAACCTGAAACAGCTTACAAAGGTT < 41bp 0.701059691344995 0.456082088012664 0.29184675 0.09762138 prediction 0.40211938268999 Functional Loss - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57972096 chr12:57972099 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_98085 0 0 10 BUD13 POSTAR2 ENCODE chr12:57972016-57972126
64251 chr17 77709420 77709420 1 + G T LUAD 77709416 + 77709396 77709436 41 CTTCCACTACGCCAACAACCCCAGGGTCACACCCCTGCTGA CTTCCACTACGCCAACAACCCCAGTGTCACACCCCTGCTGA < 41bp 0.732627402673774 0.531569156018305 0.9309046 0.59273773 prediction 0.402116493310938 Functional Loss - ENPP7 ENSG00000182156 CDS Human protein_coding chr17:77709416 chr17:77709420 nonsynonymous SNV 0.897 4 25 hm5C_associated_SNPs_98087 0 0 1 GRWD1 POSTAR2 ENCODE chr17:77709359-77709446
64251 chr5 112227974 112227974 1 + C T UCEC 112227971 + 112227951 112227991 41 TCTTATTAAGAGCATGTTTACAACGTTTGGAATGGAGCAGT TCTTATTAAGAGCATGTTTACAATGTTTGGAATGGAGCAGT < 41bp 0.70978764492766 0.5087310796868 0.25621885 0.2726342 prediction 0.40211313048172 Functional Loss - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112227971 chr5:112227974 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_98089 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:112227968-112227980
64251 chr8 48889314 48889314 1 + T C STAD 48889313 + 48889293 48889333 41 TGATGATTTCCTGACAGTGACTGGGAAGACCGTGCGCTTGC TGATGATTTCCTGACAGTGACCGGGAAGACCGTGCGCTTGC < 41bp 0.815117328673431 0.614065220219495 0.36219683 0.41152808 prediction 0.402104216907871 Functional Loss - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48889313 chr8:48889314 synonymous SNV . 0 22 hm5C_associated_SNPs_98094 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:48889247-48889315
64251 chr19 35557170 35557170 1 + C T GBM 35557167 + 35557147 35557187 41 CCCCAGACTCACTCCGAAGCCAGCGGCATGGTGACCCAGCT CCCCAGACTCACTCCGAAGCCAGTGGCATGGTGACCCAGCT < 41bp 0.720904754964261 0.519852825261446 0.9069387 0.73750705 prediction 0.40210385940563 Functional Loss - HPN ENSG00000105707 CDS Human protein_coding chr19:35557167 chr19:35557170 synonymous SNV . 0 24 hm5C_associated_SNPs_98095 0 0 1 DDX55 POSTAR2 ENCODE chr19:35557161-35557248
64251 chr12 27543055 27543055 1 + C T GBM 27543052 + 27543032 27543072 41 GTTTGCAAGTTCACAGTAATCTCCACGCTGGAAGGACACGT GTTTGCAAGTTCACAGTAATCTCTACGCTGGAAGGACACGT < 41bp 0.80990143494859 0.608849938232187 0.8833127 0.37069643 prediction 0.402102993432806 Functional Loss - ARNTL2 ENSG00000029153 CDS Human protein_coding chr12:27543052 chr12:27543055 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_98096 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr12:27543036-27543058
64251 chr18 77895883 77895883 1 + G A LIHC 77895880 + 77895860 77895900 41 TGTATGTGAAGGTGAGGCCTCAGGCTGAGGGCACCCCCGGG TGTATGTGAAGGTGAGGCCTCAGACTGAGGGCACCCCCGGG < 41bp 0.701048677034245 0.439122761923133 0.6250586 0.16024745 prediction 0.402097354068491 Functional Loss - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895880 chr18:77895883 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_98099 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr18:77895844-77895883
64251 chr7 129394908 129394908 1 + G A PAAD 129394905 + 129394885 129394925 41 ACCAGACTGTGGTGACCAGCCTCGCCCAGGGCAACGGACCA ACCAGACTGTGGTGACCAGCCTCACCCAGGGCAACGGACCA < 41bp 0.701048379468088 0.473621512614004 0.057109058 0.008925825 prediction 0.402096758936176 Functional Loss - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129394905 chr7:129394908 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_98100 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129394883-129394940
64251 chr8 23153662 23153662 1 + C T rs182966995 23153660 + 23153640 23153680 41 CGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCA CGTCCCGACGTAGCTGGCGCCCTCAACACCATAAGCCTTCA < 41bp 0.701046851784908 0.446976278625267 0.4442108 0.14160544 prediction 0.402093703569816 Functional Loss - R3HCC1 ENSG00000104679 UTR3 Human protein_coding chr8:23153660 chr8:23153662 . . 0 23 hm5C_associated_SNPs_98104 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23153639-23153673
64251 chr3 142840109 142840109 1 + G A rs535580758 142840106 + 142840086 142840126 41 TGGCGGGGGTTGCGGCCCCTCCAGGCAATGGCACTCGGGGC TGGCGGGGGTTGCGGCCCCTCCAAGCAATGGCACTCGGGGC < 41bp 0.843175868389625 0.64212940922249 0.90287364 0.83362377 prediction 0.402092918334269 Functional Loss - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840106 chr3:142840109 nonsynonymous SNV 0.049 1 24 hm5C_associated_SNPs_98105 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:142840109-142840110
64251 chr1 114226002 114226002 1 + G T UCEC 114226000 + 114225980 114226020 41 AAAAGTTGTCAGGTCAGCACCAGGGCAGGCTCTGGACAAGA AAAAGTTGTCAGGTCAGCACCATGGCAGGCTCTGGACAAGA < 41bp 0.701043711118958 0.36217715578652 0.85491174 0.33584386 prediction 0.402087422237916 Functional Loss - MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114226000 chr1:114226002 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_98109 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:114225982-114226009
64251 chr9 129642743 129642743 1 + G A UCEC 129642740 + 129642720 129642760 41 GAAGCCATGATGAACAACCCCGGGTATGAGAGCAGTCCCCG GAAGCCATGATGAACAACCCCGGATATGAGAGCAGTCCCCG < 41bp 0.822298398588061 0.621256713773166 0.654676 0.3245207 prediction 0.402083369629789 Functional Loss - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642740 chr9:129642743 synonymous SNV . 0 24 hm5C_associated_SNPs_98111 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:129642720-129642749
64251 chr13 113907459 113907459 1 + C T LUAD 113907456 + 113907436 113907476 41 GAAAGCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTTG GAAAGCACAGTGGTCGAAAACTTTAGTGGCAAACTACTTTG < 41bp 0.701041137820589 0.460112002963944 0.14075822 0.080388635 prediction 0.402082275641178 Functional Loss - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113907456 chr13:113907459 stopgain 0.217 1 24 hm5C_associated_SNPs_98112 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113907453-113907491
64251 chr4 109571910 109571910 1 + G T LUAD 109571906 + 109571886 109571926 41 GCACATGCCGTCGGCCATGACTGTGTATGCTCTGGTGGTGG GCACATGCCGTCGGCCATGACTGTTTATGCTCTGGTGGTGG < 41bp 0.704916060252892 0.503876052845855 0.08952579 0.13091272 prediction 0.402080014814074 Functional Loss - OSTC ENSG00000198856 CDS Human protein_coding chr4:109571906 chr4:109571910 synonymous SNV . 0 25 hm5C_associated_SNPs_98113 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr4:109571812-109571926
64251 chr9 730166 730166 1 + C T UCEC 730163 + 730143 730183 41 ACCTCAGAAGGAAAGCCAATCAGCAGCCTGGATGCCTTCCC ACCTCAGAAGGAAAGCCAATCAGTAGCCTGGATGCCTTCCC < 41bp 0.721948202698176 0.5209119977752 0.8979875 0.85633206 prediction 0.40207240984595 Functional Loss - KANK1 ENSG00000107104 CDS Human protein_coding chr9:730163 chr9:730166 synonymous SNV . 0 24 hm5C_associated_SNPs_98118 0 0 2 GRWD1 POSTAR2 ENCODE chr9:730159-730198
64251 chr1 226026400 226026400 1 + C T BLCA 226026397 + 226026377 226026417 41 CGTGAAGCCCCCCCAGCTGCCCGCAGGCCATACCCCGAAGC CGTGAAGCCCCCCCAGCTGCCCGTAGGCCATACCCCGAAGC < 41bp 0.772992488094581 0.571962204091548 0.08002648 0.08221391 prediction 0.402060568006066 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026397 chr1:226026400 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_98123 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:226026400-226026401
64251 chr16 69970311 69970311 1 + C T UCEC 69970308 + 69970288 69970328 41 ACCCACGAGCTGAAGGAGGGCGGCGAGAGCATCCGGGTCAC ACCCACGAGCTGAAGGAGGGCGGTGAGAGCATCCGGGTCAC < 41bp 0.76116522376241 0.560135011841886 0.87934613 0.8348049 prediction 0.402060423841048 Functional Loss - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69970308 chr16:69970311 synonymous SNV . 0 24 hm5C_associated_SNPs_98124 0 0 1 LARP4 POSTAR2 ENCODE chr16:69970214-69970327
64251 chr3 52842609 52842609 1 + C T UCEC 52842607 + 52842587 52842627 41 AGAAAGGATGCCAGCATCGGCACGAAGGTTGTCTGCTGGTT AGAAAGGATGCCAGCATCGGCATGAAGGTTGTCTGCTGGTT < 41bp 0.848295569319128 0.647270033480803 0.19015911 0.1076926 prediction 0.402051071676651 Functional Loss - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52842607 chr3:52842609 nonsynonymous SNV 0.002 2 23 hm5C_associated_SNPs_98129 0 0 1 LSM11 POSTAR2 ENCODE chr3:52842607-52842667
64251 chr3 47454547 47454547 1 + C T UCEC 47454544 + 47454524 47454564 41 CCTTCTCCCTGGACAGCTCCCTGCGGGGCAAACAGCGGATG CCTTCTCCCTGGACAGCTCCCTGTGGGGCAAACAGCGGATG < 41bp 0.701023768793349 0.486012739090249 0.2749557 0.18612838 prediction 0.402047537586698 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47454544 chr3:47454547 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_98130 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:47454518-47454556
64251 chr7 128481255 128481255 1 + G A UCEC 128481252 + 128481232 128481272 41 ATCGAGGGGCCCTCACAAGCCAAGATCGAATGTGACGACAA ATCGAGGGGCCCTCACAAGCCAAAATCGAATGTGACGACAA < 41bp 0.701021814213645 0.464450018113015 0.4316783 0.2816978 prediction 0.402043628427291 Functional Loss - FLNC ENSG00000128591 CDS Human protein_coding chr7:128481252 chr7:128481255 synonymous SNV . 0 24 hm5C_associated_SNPs_98133 0 0 2 PRPF8 POSTAR2 ENCODE chr7:128481125-128481284
64251 chr16 67229753 67229753 1 + A T PAAD 67229751 + 67229731 67229771 41 TTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCAC TTCACTCCCACTGGGCCCAACATCACTGGACACCCGGCCAC < 41bp 0.707717375996268 0.506700689370036 0.19637755 0.24317211 prediction 0.402033373252465 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67229751 chr16:67229753 nonsynonymous SNV 0.956 1 23 hm5C_associated_SNPs_98135 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:67229730-67229757
64251 chr7 151805267 151805267 1 + C T SKCM 151805265 + 151805245 151805285 41 GCCGACACGCTGGCCTACAGCTCGTCCCCTGTCGTCCGCGG GCCGACACGCTGGCCTACAGCTTGTCCCCTGTCGTCCGCGG < 41bp 0.701013785997152 0.427608532356842 0.03805667 0.04188454 prediction 0.402027571994305 Functional Loss - GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151805265 chr7:151805267 nonsynonymous SNV 0.551 1 23 hm5C_associated_SNPs_98140 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:151805248-151805275
64251 chrX 115586147 115586147 1 + G A SKCM 115586144 + 115586124 115586164 41 ATTAACATTTTTTTGGTAGGCTGGAATTTACTGGGTTCATC ATTAACATTTTTTTGGTAGGCTGAAATTTACTGGGTTCATC < 41bp 0.754306493460322 0.553292872180192 0.38023674 0.34295452 prediction 0.40202724256026 Functional Loss - SLC6A14 ENSG00000087916 CDS Human other chrX:115586144 chrX:115586147 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_98141 0 0 2 RPS3 POSTAR2 ENCODE chrX:115586142-115586148
64251 chr10 99508086 99508086 1 + C T rs116366646 99508084 + 99508064 99508104 41 GCACATGTGAAGCCGCCTACCGCGTGCTGCACTGGGAGAAC GCACATGTGAAGCCGCCTACCGTGTGCTGCACTGGGAGAAC < 41bp 0.83917883007118 0.6381685982417 0.403086 0.5151723 prediction 0.402020463658961 Functional Loss - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99508084 chr10:99508086 synonymous SNV . 0 23 hm5C_associated_SNPs_98149 1 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:99508078-99508108
64251 chr5 149934180 149934180 1 + G A rs535981066 149934177 + 149934157 149934197 41 GCAGGGAAGACCAGCTCTCTCCAGGACATCGGGCTGCGTGA GCAGGGAAGACCAGCTCTCTCCAAGACATCGGGCTGCGTGA < 41bp 0.701004889104197 0.449491554493327 0.876534 0.40145487 prediction 0.402009778208394 Functional Loss - NDST1 ENSG00000070614 UTR3 Human protein_coding chr5:149934177 chr5:149934180 . . 0 24 hm5C_associated_SNPs_98155 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:149934151-149934182
64251 chr7 141315347 141315347 1 + A T PRAD 141315345 + 141315325 141315365 41 TTGAGTCATACCCTCTTTGCCGAAAGTGGAAACAAAGTCCA TTGAGTCATACCCTCTTTGCCGTAAGTGGAAACAAAGTCCA < 41bp 0.730903888708475 0.529903370677497 0.12696132 0.09714341 prediction 0.402001036061955 Functional Loss - AGK ENSG00000006530 CDS Human protein_coding chr7:141315345 chr7:141315347 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_98160 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:141315331-141315352
64251 chr19 19655205 19655205 1 + G A PAAD 19655202 + 19655182 19655222 41 GTGGACCCCCGAGACCTCACCTCGGCGGCGTCTGCCCCCAG GTGGACCCCCGAGACCTCACCTCAGCGGCGTCTGCCCCCAG < 41bp 0.835962788765811 0.634967206808196 0.81697106 0.3430228 prediction 0.401991163915229 Functional Loss - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19655202 chr19:19655205 synonymous SNV . 0 24 hm5C_associated_SNPs_98165 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:19655194-19655215
64251 chr1 109777925 109777925 1 + C T UCEC 109777922 + 109777902 109777942 41 AGCAGCCCATTGCTGCCCTGCACCGGGATGAGTGGCTCCGG AGCAGCCCATTGCTGCCCTGCACTGGGATGAGTGGCTCCGG < 41bp 0.725634754312178 0.524643205442468 0.17526188 0.14518175 prediction 0.401983097739421 Functional Loss - SARS ENSG00000031698 CDS Human protein_coding chr1:109777922 chr1:109777925 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_98169 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr14 104001539 104001539 1 + G A rs533160742 104001536 + 104001516 104001556 41 GGGGGCATTGACCCTGAGACCACGCTGCGTCTGACCCCTGG GGGGGCATTGACCCTGAGACCACACTGCGTCTGACCCCTGG < 41bp 0.8162143112379 0.615225728338991 0.25032353 0.2943461 prediction 0.401977165797819 Functional Loss - TRMT61A ENSG00000166166 UTR3 Human protein_coding chr14:104001536 chr14:104001539 . . 0 24 hm5C_associated_SNPs_98171 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr14:104001520-104001540
64251 chr19 45593578 45593578 1 + G T SARC 45593576 + 45593556 45593596 41 CTTCGGGAGCGTTACCTCCGCAGCCTGCTGGCCATGGTGGG CTTCGGGAGCGTTACCTCCGCATCCTGCTGGCCATGGTGGG < 41bp 0.700978920089228 0.351855610707021 0.3992928 0.17761022 prediction 0.401957840178455 Functional Loss - GEMIN7 ENSG00000142252 CDS Human protein_coding chr19:45593576 chr19:45593578 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_98179 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:45593553-45593582
64251 chrX 118123528 118123528 1 + C T LUAD 118123525 + 118123505 118123545 41 GGAGAAGTGGGATGCTACCTCTCCAAAAGCTGCTTCCAGCA GGAGAAGTGGGATGCTACCTCTCTAAAAGCTGCTTCCAGCA < 41bp 0.799913963422437 0.598936647682326 0.9677945 0.9391665 prediction 0.401954631480222 Functional Loss - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118123525 chrX:118123528 nonsynonymous SNV 0.283 0 24 hm5C_associated_SNPs_98181 0 0 3 BUD13 POSTAR2 ENCODE chrX:118123517-118123610
64251 chr11 10879908 10879908 1 + G A rs191136926 10879905 + 10879885 10879925 41 ATGCAGATTCCTGGGTACTGCCAGATACGGTTGGTGATCTT ATGCAGATTCCTGGGTACTGCCAAATACGGTTGGTGATCTT < 41bp 0.700976487104546 0.476285577192808 0.8551154 0.8801316 prediction 0.401952974209092 Functional Loss - ZBED5-AS1 ENSG00000247271 ncRNA_exonic Human antisense chr11:10879905 chr11:10879908 . . 0 24 hm5C_associated_SNPs_98182 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:10879852-10879909
64251 chr4 2695436 2695436 1 + C T COAD 2695433 + 2695413 2695453 41 GCCTGCTGCGCTGTCACCTGCTGCGCTCTCACCTGCCTCCA GCCTGCTGCGCTGTCACCTGCTGTGCTCTCACCTGCCTCCA < 41bp 0.700974020490071 0.482820835173894 0.1432513 0.110462755 prediction 0.401948040980141 Functional Loss - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2695433 chr4:2695436 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_98184 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:2695398-2695436
64251 chr19 11098463 11098463 1 + A C rs547268941 11098462 + 11098442 11098482 41 CGCCGCCTCGCCCGTGATGCCACCGCAGACCCAGTCCCCCG CGCCGCCTCGCCCGTGATGCCCCCGCAGACCCAGTCCCCCG < 41bp 0.800424297010187 0.599451380132783 0.12610924 0.058984995 prediction 0.401945833754809 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11098462 chr19:11098463 synonymous SNV . 0 22 hm5C_associated_SNPs_98185 3 0 2 GRWD1 POSTAR2 ENCODE chr19:11098420-11098506
64251 chr3 47452712 47452712 1 + C T UCEC 47452709 + 47452689 47452729 41 CTGGGGGTGGGCAGCCCCTGCTGCAGCCCACCAAGGTGGAT CTGGGGGTGGGCAGCCCCTGCTGTAGCCCACCAAGGTGGAT < 41bp 0.745530408554479 0.544559533948633 0.08931208 0.06454319 prediction 0.401941749211692 Functional Loss - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47452709 chr3:47452712 stopgain 0.997 1 24 hm5C_associated_SNPs_98187 0 0 3 DROSHA POSTAR2 ENCODE chr3:47452710-47452814
64251 chr13 113783855 113783855 1 + G A COAD 113783852 + 113783832 113783872 41 AAGAGATGAAGAAAGGACACCTCGAAAGAGAGTGCATGGAA AAGAGATGAAGAAAGGACACCTCAAAAGAGAGTGCATGGAA < 41bp 0.817368281824668 0.616397876644444 0.2649337 0.14386621 prediction 0.401940810360448 Functional Loss - F10 ENSG00000126218 CDS Human protein_coding chr13:113783852 chr13:113783855 nonsynonymous SNV 0.029 4 24 hm5C_associated_SNPs_98188 0 0 1 RPS3 POSTAR2 ENCODE chr13:113783841-113783870
64251 chr10 71835473 71835473 1 + G A SKCM 71835470 + 71835450 71835490 41 GCTGTCCCGTTCAGCTAGGGCAGGTGTCATCTTTCCAGTGG GCTGTCCCGTTCAGCTAGGGCAGATGTCATCTTTCCAGTGG < 41bp 0.826620553854776 0.625653382060022 0.6166278 0.3173108 prediction 0.401934343589509 Functional Loss - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71835470 chr10:71835473 nonsynonymous SNV 0.978 4 24 hm5C_associated_SNPs_98192 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:71835441-71835473
64251 chrX 109416589 109416589 1 + G A LUSC 109416586 + 109416566 109416606 41 ACTCTCATGACCATGACCCACGGGAAGCTGGTCATCCTGTT ACTCTCATGACCATGACCCACGGAAAGCTGGTCATCCTGTT < 41bp 0.772484328334082 0.571517573877259 0.42048416 0.29965785 prediction 0.401933508913647 Functional Loss - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109416586 chrX:109416589 synonymous SNV . 0 24 hm5C_associated_SNPs_98194 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:109416571-109416609
64251 chr16 70806018 70806018 1 - G A UCEC 70806021 - 70806001 70806041 41 TAGCGGCATCAGTGTCTTCACTGCAGCCAGGTAAGTGGCTT TAGCGGCATCAGTGTCTTCACTGTAGCCAGGTAAGTGGCTT < 41bp 0.78307700397068 0.582123205466464 0.14828172 0.088846296 prediction 0.401907597008432 Functional Loss - VAC14 ENSG00000103043 CDS Human protein_coding chr16:70806021 chr16:70806018 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_98206 0 0 2 PPIG POSTAR2 ENCODE chr16:70806009-70806068
64251 chr17 4846490 4846490 1 + G A UCEC 4846487 + 4846467 4846507 41 TTCCCAGGGCTCGGGTGCTTCTGGTTCCAGACAATACCTTC TTCCCAGGGCTCGGGTGCTTCTGATTCCAGACAATACCTTC < 41bp 0.822071679405867 0.621123569174039 0.28431264 0.22410834 prediction 0.401896220463656 Functional Loss - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846487 chr17:4846490 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_98208 0 0 1 U2AF2 POSTAR2 ENCODE chr17:4846399-4846508
64251 chr4 79522685 79522685 1 + C T rs5949 79522682 + 79522662 79522702 41 AGTTAATTGTGTGAGGAACACGCCGGCCTTTTTAGCCGAAA AGTTAATTGTGTGAGGAACACGCTGGCCTTTTTAGCCGAAA < 41bp 0.775683314232852 0.574736343779318 0.21769518 0.09391436 prediction 0.401893940907068 Functional Loss - ANXA3 ENSG00000138772 CDS Human protein_coding chr4:79522682 chr4:79522685 nonsynonymous SNV 0.224 4 24 hm5C_associated_SNPs_98209 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr4:79522669-79522690
64251 chr2 131904286 131904286 1 + G T LUAD 131904284 + 131904264 131904304 41 ACAACGACAGCGACCTGGCACTGGGCATGCTGGCAGGAGCA ACAACGACAGCGACCTGGCACTTGGCATGCTGGCAGGAGCA < 41bp 0.700939050246027 0.389418329518229 0.29591775 0.12851247 prediction 0.401878100492053 Functional Loss - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131904284 chr2:131904286 nonsynonymous SNV 0.833 1 23 hm5C_associated_SNPs_98215 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:131904263-131904286
64251 chr19 19612198 19612198 1 + C T LUAD 19612195 + 19612175 19612215 41 GCACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACCCCGT GCACAGGCCAAGGCCGAGCCCACTGCTGCCCCACACCCCGT < 41bp 0.729453098705022 0.528521583175808 0.3703075 0.55094594 prediction 0.401863031058427 Functional Loss - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19612195 chr19:19612198 synonymous SNV . 0 24 hm5C_associated_SNPs_98217 0 0 1 BUD13 POSTAR2 ENCODE chr19:19612156-19612228
64251 chr17 28512754 28512754 1 + C T rs564701011 28512751 + 28512731 28512771 41 ACTGTAATTCCTGGAACCTGCTGCGTAAAACCATAAAGGAG ACTGTAATTCCTGGAACCTGCTGTGTAAAACCATAAAGGAG < 41bp 0.701712702205173 0.500781766195861 0.25173897 0.20540184 prediction 0.401861872018625 Functional Loss - NSRP1 ENSG00000126653 UTR3 Human protein_coding chr17:28512751 chr17:28512754 . . 0 24 hm5C_associated_SNPs_98218 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:28512734-28512756
64251 chr9 93660412 93660412 1 + G A rs141926409 93660409 + 93660389 93660429 41 ACCTTATGGTCCTTCTTTAGCAGGTAACAAAGGAGCATCAG ACCTTATGGTCCTTCTTTAGCAGATAACAAAGGAGCATCAG < 41bp 0.749205348555052 0.548275150452094 0.9040102 0.7797074 prediction 0.401860396205917 Functional Loss - SYK ENSG00000165025 UTR3 Human protein_coding chr9:93660409 chr9:93660412 . . 0 24 hm5C_associated_SNPs_98220 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr9:93660403-93660424
64251 chr1 25785230 25785230 1 + G A READ 25785227 + 25785207 25785247 41 TGGAGTTGTGAACTCTTCACCTCGAAGTCATAGCGCCACAA TGGAGTTGTGAACTCTTCACCTCAAAGTCATAGCGCCACAA < 41bp 0.809801940028743 0.608872454292566 0.45093215 0.037190706 prediction 0.401858971472354 Functional Loss - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25785227 chr1:25785230 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_98222 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:25785197-25785230
64251 chr2 139316739 139316739 1 + G A CESC 139316736 + 139316716 139316756 41 GCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTCATAAA GCAGTTTTTTCGTGAGAGGACAAAAATTTAAAGCTCATAAA < 41bp 0.700928861119266 0.470292618697416 0.12337348 0.08969143 prediction 0.401857722238531 Functional Loss - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139316736 chr2:139316739 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_98223 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:139316708-139316743
64251 chr20 34053882 34053882 1 + G T UCEC 34053878 + 34053858 34053898 41 GTGCAGGTGTGAGAGTCTAGCAGAGGTGAACACCCAGCTTC GTGCAGGTGTGAGAGTCTAGCAGATGTGAACACCCAGCTTC < 41bp 0.70092856650413 0.491215357723501 0.93410164 0.8818319 prediction 0.401857133008261 Functional Loss - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34053878 chr20:34053882 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_98224 0 0 7 BUD13 POSTAR2 ENCODE chr20:34053850-34053893
64251 chr2 74684593 74684593 1 + C T COAD 74684590 + 74684570 74684610 41 AGGAGCGGGCGCGGAAGCGGCGGCTCCAGGCGGCGCGGCGG AGGAGCGGGCGCGGAAGCGGCGGTTCCAGGCGGCGCGGCGG < 41bp 0.728813689395578 0.527891034213897 0.45418367 0.85567075 prediction 0.401845310363362 Functional Loss - INO80B ENSG00000115274 CDS Human protein_coding chr2:74684590 chr2:74684593 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_98227 0 0 1 SRSF1 POSTAR2 ENCODE chr2:74684491-74684593
64251 chr1 205500814 205500814 1 + T C rs575875384 205500813 + 205500793 205500833 41 CCACCCTGGTGTTTGGGCACCTGCGTGGGATGCACACGGAT CCACCCTGGTGTTTGGGCACCCGCGTGGGATGCACACGGAT < 41bp 0.70091395130611 0.486396045156455 0.84247565 0.6295443 prediction 0.401827902612221 Functional Loss - CDK18 ENSG00000117266 UTR3 Human protein_coding chr1:205500813 chr1:205500814 . . 0 22 hm5C_associated_SNPs_98232 0 0 3 LSM11 POSTAR2 ENCODE chr1:205500785-205500840
64251 chr1 235505401 235505401 1 + C T UCEC 235505398 + 235505378 235505418 41 ATATTGAAGACAACTCAAAACTCCGACGTGGCTTTCCAGTG ATATTGAAGACAACTCAAAACTCTGACGTGGCTTTCCAGTG < 41bp 0.700910409128186 0.471379034080424 0.069536716 0.065131664 prediction 0.401820818256373 Functional Loss - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505398 chr1:235505401 stopgain 0.978 1 24 hm5C_associated_SNPs_98234 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:235505345-235505428
64251 chr11 77907430 77907430 1 + C T HNSC 77907428 + 77907408 77907448 41 GGCGCTGCTGGCGCTGGGCGCGCGCCTCTACGTGGGCGGCG GGCGCTGCTGGCGCTGGGCGCGTGCCTCTACGTGGGCGGCG < 41bp 0.79452018793725 0.593612489136744 0.7898631 0.86081344 prediction 0.401815397601011 Functional Loss - USP35 ENSG00000118369 CDS Human protein_coding chr11:77907428 chr11:77907430 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_98238 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:77907402-77907435
64251 chr15 58837954 58837954 1 + G A rs34351746 58837951 + 58837931 58837971 41 TTCCCATTAGGGCTGGATGCCGCGGGACCTTTGTTTGAGGG TTCCCATTAGGGCTGGATGCCGCAGGACCTTTGTTTGAGGG < 41bp 0.824596578125039 0.623692904444439 0.3523206 0.069104135 prediction 0.4018073473612 Functional Loss - LIPC ENSG00000166035 CDS Human protein_coding chr15:58837951 chr15:58837954 synonymous SNV . 0 24 hm5C_associated_SNPs_98242 1 0 1 SND1 POSTAR2 ENCODE chr15:58837940-58837981
64251 chr21 45877210 45877210 1 + A C OV 45877206 + 45877186 45877226 41 CCTACGTCGTGTACTATGTGCGCCACAACCAGGAGGATGCC CCTACGTCGTGTACTATGTGCGCCCCAACCAGGAGGATGCC < 41bp 0.700902822607495 0.275107091036869 0.09586087 0.087326854 prediction 0.401805645214991 Functional Loss - LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45877206 chr21:45877210 nonsynonymous SNV 0.973 2 25 hm5C_associated_SNPs_98243 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:45877210-45877211
64251 chr1 204380153 204380153 1 - G A READ 204380155 - 204380135 204380175 41 AATCTTTGAGTTCGCTGCAGCTCGACTCCTCAGACCCCTCG AATCTTTGAGTTCGCTGCAGCTTGACTCCTCAGACCCCTCG < 41bp 0.843851330143422 0.642949794508679 0.09302437 0.10258713 prediction 0.401803071269487 Functional Loss - PPP1R15B ENSG00000158615 CDS Human protein_coding chr1:204380155 chr1:204380153 synonymous SNV . 0 23 hm5C_associated_SNPs_98244 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:204380124-204380166
64251 chr14 89307480 89307480 1 + A C PAAD 89307476 + 89307456 89307496 41 GGAACAGGCTATCAGAACACCCAGAACCGCCTACACAGCCC GGAACAGGCTATCAGAACACCCAGCACCGCCTACACAGCCC < 41bp 0.700901458455105 0.279967066043522 0.052920282 0.024699867 prediction 0.401802916910209 Functional Loss - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307476 chr14:89307480 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_98245 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:89307453-89307487
64251 chr6 26413533 26413533 1 + C T UCEC 26413531 + 26413511 26413551 41 TTAATTGGCATTATTGTGTTCTCGGCTGTGAGAGCTTCATA TTAATTGGCATTATTGTGTTCTTGGCTGTGAGAGCTTCATA < 41bp 0.700900952071703 0.432240708907861 0.26327702 0.17318872 prediction 0.401801904143407 Functional Loss - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26413531 chr6:26413533 synonymous SNV . 0 23 hm5C_associated_SNPs_98246 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:26413519-26413550
64251 chr2 97019076 97019076 1 + A T HNSC 97019072 + 97019052 97019092 41 CAGCAGTGTGCAGAAGATCGCCAGATCTGCCCTTCCCTGGC CAGCAGTGTGCAGAAGATCGCCAGTTCTGCCCTTCCCTGGC < 41bp 0.70089795969768 0.367317330991987 0.908468 0.35837263 prediction 0.401795919395361 Functional Loss - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97019072 chr2:97019076 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_98249 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:97019075-97019097
64251 chr13 24466086 24466086 1 + C T rs540250956 24466083 + 24466063 24466103 41 GCCCCTGAGGCCCAGTCTCTCCTCGGAGGCCTTTCTCTCCC GCCCCTGAGGCCCAGTCTCTCCTTGGAGGCCTTTCTCTCCC < 41bp 0.700897776682712 0.499020031179191 0.11785793 0.059555322 prediction 0.401795553365425 Functional Loss - C1QTNF9B ENSG00000205863 CDS Human protein_coding chr13:24466083 chr13:24466086 nonsynonymous SNV 0.014 1 24 hm5C_associated_SNPs_98250 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:24466077-24466117
64251 chr2 65248061 65248061 1 + G A rs144265531 65248058 + 65248038 65248078 41 CCCACCAGGGACCGGACCACCACGGTGGTGAATGTGGAAGG CCCACCAGGGACCGGACCACCACAGTGGTGAATGTGGAAGG < 41bp 0.795051028617031 0.594155802424258 0.44007522 0.3346125 prediction 0.401790452385548 Functional Loss - SLC1A4 ENSG00000115902 CDS Human protein_coding chr2:65248058 chr2:65248061 synonymous SNV . 0 24 hm5C_associated_SNPs_98255 0 0 4 DDX55 POSTAR2 ENCODE chr2:65248059-65248118
64251 chr19 8326608 8326608 1 + C T rs114452930 8326605 + 8326585 8326625 41 ACATACTACGAGTCCATCAGCAACAGGGGCCCCTTCTTCGG ACATACTACGAGTCCATCAGCAATAGGGGCCCCTTCTTCGG < 41bp 0.742408807940348 0.541516965573349 0.2852518 0.32792705 prediction 0.401783684733998 Functional Loss - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8326605 chr19:8326608 synonymous SNV . 0 24 hm5C_associated_SNPs_98259 0 0 1 PCBP2 POSTAR2 ENCODE chr19:8326570-8326609
64251 chr5 148730749 148730749 1 + C T KIRP 148730746 + 148730726 148730766 41 GGTGTTGGGGTGCAGCCTGGCACCGTGGCATTAGTAAGACA GGTGTTGGGGTGCAGCCTGGCACTGTGGCATTAGTAAGACA < 41bp 0.759400021645532 0.558509137176435 0.19080651 0.08175686 prediction 0.401781768938195 Functional Loss - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148730746 chr5:148730749 synonymous SNV . 0 24 hm5C_associated_SNPs_98261 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:148730633-148730787
64251 chr11 64855582 64855582 1 + C T BRCA 64855580 + 64855560 64855600 41 CCTCACATCCGCGTGGGCCCCTCCTGAGCCCCCTTGCTTGT CCTCACATCCGCGTGGGCCCCTTCTGAGCCCCCTTGCTTGT < 41bp 0.700889015711554 0.415709017199184 0.047783047 0.026694447 prediction 0.401778031423109 Functional Loss - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855580 chr11:64855582 nonsynonymous SNV 0.839 1 23 hm5C_associated_SNPs_98263 0 0 1 LARP4 POSTAR2 ENCODE chr11:64855579-64855693
64251 chr10 45480397 45480397 1 + C T CESC 45480394 + 45480374 45480414 41 CGGCGACACCGGTTCTCTATCAACGGCCACTTCTACAATCA CGGCGACACCGGTTCTCTATCAATGGCCACTTCTACAATCA < 41bp 0.732860248176209 0.531971746532472 0.8999852 0.2642128 prediction 0.401777003287473 Functional Loss - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480394 chr10:45480397 synonymous SNV . 0 24 hm5C_associated_SNPs_98264 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:45480385-45480418
64251 chr19 54970897 54970897 1 + G T rs147245394 54970894 + 54970874 54970914 41 TGGAGGTTTGGAGACTCATTCTGGAATCTAGTGTGGGTCAA TGGAGGTTTGGAGACTCATTCTGTAATCTAGTGTGGGTCAA < 41bp 0.700884699784805 0.334883338193142 0.8452245 0.40376452 prediction 0.40176939956961 Functional Loss - LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54970894 chr19:54970897 . . 0 24 hm5C_associated_SNPs_98268 0 0 17 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:54970822-54970897
64251 chr5 149425088 149425088 1 + G A COAD 149425085 + 149425065 149425105 41 AATGTGGAGGACTTTTGGGCCACGATGGAGACAGAGGTGAT AATGTGGAGGACTTTTGGGCCACAATGGAGACAGAGGTGAT < 41bp 0.70088147596159 0.466496896522505 0.1088033 0.23649028 prediction 0.40176295192318 Functional Loss - HMGXB3 ENSG00000113716 CDS Human protein_coding chr5:149425085 chr5:149425088 synonymous SNV . 0 24 hm5C_associated_SNPs_98271 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:149425062-149425088
64251 chr16 2255533 2255533 1 + G A rs28384419 2255530 + 2255510 2255550 41 TAAGGTACGGAGGCCGCGAGCCAGGGGCCGGGAACCGGCTG TAAGGTACGGAGGCCGCGAGCCAAGGGCCGGGAACCGGCTG < 41bp 0.815704398103861 0.614823419132444 0.9104347 0.8531637 prediction 0.401761957942835 Functional Loss - MLST8 ENSG00000167965 intronic Human protein_coding chr16:2255530 chr16:2255533 . . 0 24 hm5C_associated_SNPs_98272 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:2255508-2255581
64251 chr3 10322405 10322405 1 + C T rs79228813 10322403 + 10322383 10322423 41 CTTGATTCACTGTCCGTCTTCACGGATTAGCTGTGCTGTTA CTTGATTCACTGTCCGTCTTCATGGATTAGCTGTGCTGTTA < 41bp 0.726749010423812 0.525869116460168 0.30821097 0.66091454 prediction 0.401759787927287 Functional Loss - TATDN2 ENSG00000157014 UTR3 Human protein_coding chr3:10322403 chr3:10322405 . . 0 23 hm5C_associated_SNPs_98274 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10322342-10322438
64251 chr22 19423520 19423520 1 + G A rs191851927 19423517 + 19423497 19423537 41 GCTATCCTTAACATGCTGCCCCTGAGAGTAGGAATGACCAG GCTATCCTTAACATGCTGCCCCTAAGAGTAGGAATGACCAG < 41bp 0.700878570999663 0.475689350307822 0.0893628 0.04892531 prediction 0.401757141999326 Functional Loss - MRPL40 ENSG00000185608 UTR3 Human protein_coding chr22:19423517 chr22:19423520 . . 0 24 hm5C_associated_SNPs_98277 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:19423481-19423520
64251 chr3 53215505 53215505 1 + C T CESC 53215502 + 53215482 53215522 41 TGAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCGGAG TGAGGACGAGGCCAAGTTCCCAATGATGAACCGCCGCGGAG < 41bp 0.752776747373564 0.551898367091578 0.27190584 0.2908427 prediction 0.401756760563972 Functional Loss - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53215502 chr3:53215505 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_98278 0 0 1 GRWD1 POSTAR2 ENCODE chr3:53215465-53215517
64251 chr1 57378109 57378109 1 + A T LGG 57378107 + 57378087 57378127 41 CCACGAGGTGCTGCGGCACACAAGCCTGGGGCCTCTGGAGG CCACGAGGTGCTGCGGCACACATGCCTGGGGCCTCTGGAGG < 41bp 0.725354073391498 0.52448087728903 0.63127786 0.5077924 prediction 0.401746392204938 Functional Loss - C8A ENSG00000157131 CDS Human protein_coding chr1:57378107 chr1:57378109 nonsynonymous SNV 0.253 3 23 hm5C_associated_SNPs_98281 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr19 57703117 57703117 1 + G C rs59259212 57703113 + 57703093 57703133 41 TGGGTCTGGAACGCGGTTGCCACCGAGGAGGCGGCGGCCCT TGGGTCTGGAACGCGGTTGCCACCCAGGAGGCGGCGGCCCT < 41bp 0.700869393485651 0.462213856227844 0.4560341 0.044398904 prediction 0.401738786971301 Functional Loss - ZNF264 ENSG00000083844 UTR5 Human protein_coding chr19:57703113 chr19:57703117 . . 0 25 hm5C_associated_SNPs_98284 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:57703089-57703117
64251 chrX 109247314 109247314 1 + G A UCEC 109247311 + 109247291 109247331 41 GTAGCCCTGTGCCTGACCTTCGGGGTGGAGGTGGGCTTTAA GTAGCCCTGTGCCTGACCTTCGGAGTGGAGGTGGGCTTTAA < 41bp 0.825359038573571 0.624492444343347 0.93312 0.9096868 prediction 0.401733188460448 Functional Loss - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109247311 chrX:109247314 synonymous SNV . 0 24 hm5C_associated_SNPs_98288 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:109247305-109247332
64251 chr19 36124919 36124919 1 + G A CESC 36124916 + 36124896 36124936 41 CACCCCCAGGCCTCATGGCTCTTGAGGTAAGCAGGGAGCCT CACCCCCAGGCCTCATGGCTCTTAAGGTAAGCAGGGAGCCT < 41bp 0.700866316045379 0.468332285252644 0.085399 0.07109928 prediction 0.401732632090758 Functional Loss - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124916 chr19:36124919 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_98290 0 0 4 GEMIN5 POSTAR2 ENCODE chr19:36124878-36124922
64251 chr17 40174451 40174451 1 + C T BLCA 40174448 + 40174428 40174468 41 ATCGAGACGCAGGAGGACATCTACGTGGGCTCCATTGAGAC ATCGAGACGCAGGAGGACATCTATGTGGGCTCCATTGAGAC < 41bp 0.79044151906065 0.589575915239819 0.42232865 0.5039967 prediction 0.401731207641662 Functional Loss - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40174448 chr17:40174451 synonymous SNV . 0 24 hm5C_associated_SNPs_98292 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:40174427-40174464
64251 chrX 153678260 153678260 1 + C T UCEC 153678257 + 153678237 153678277 41 AGCTTCTACGACTTCATCGTCACCAAGGCACGGGGGAAGAG AGCTTCTACGACTTCATCGTCACTAAGGCACGGGGGAAGAG < 41bp 0.777848851484281 0.576983279818711 0.08347741 0.0924077 prediction 0.401731143331139 Functional Loss - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678257 chrX:153678260 synonymous SNV . 0 24 hm5C_associated_SNPs_98293 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678232-153678260
64251 chr1 28864371 28864371 1 + C T SKCM 28864369 + 28864349 28864389 41 GTTTTCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCAC GTTTTCGCCTGGGGCATGGGCATCAACTACCAGCTGGGCAC < 41bp 0.872734654952622 0.671875854336742 0.24193373 0.22782665 prediction 0.40171760123176 Functional Loss - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28864369 chr1:28864371 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_98297 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:28864340-28864380
64251 chr1 63877651 63877651 1 + C T UCEC 63877648 + 63877628 63877668 41 GTTGTGGCTTCCTTCGTTCTCTGCTGGCTGCCATTCTTTAC GTTGTGGCTTCCTTCGTTCTCTGTTGGCTGCCATTCTTTAC < 41bp 0.777193049589063 0.576338415429134 0.024250984 0.034347087 prediction 0.401709268319858 Functional Loss - ALG6 ENSG00000088035 CDS Human protein_coding chr1:63877648 chr1:63877651 synonymous SNV . 0 24 hm5C_associated_SNPs_98301 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:63877643-63877658
64251 chr20 13782274 13782274 1 + C T COAD 13782271 + 13782251 13782291 41 TCCACACATTTCTCCTTTCACTGCTGTCAATGACCTGGGAC TCCACACATTTCTCCTTTCACTGTTGTCAATGACCTGGGAC < 41bp 0.749581463410269 0.54872762828822 0.30855355 0.24418178 prediction 0.4017076702441 Functional Loss - NDUFAF5 ENSG00000101247 CDS Human protein_coding chr20:13782271 chr20:13782274 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_98302 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr20:13782266-13782310
64251 chr1 160340766 160340766 1 + C T STAD 160340764 + 160340744 160340784 41 AAGTACCGCACGGCCCACGCCACGCGAGAACGCATCCGCGT AAGTACCGCACGGCCCACGCCATGCGAGAACGCATCCGCGT < 41bp 0.837850696617415 0.636998036872129 0.25257376 0.29680088 prediction 0.401705319490571 Functional Loss - NHLH1 ENSG00000171786 CDS Human protein_coding chr1:160340764 chr1:160340766 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_98304 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:160340743-160340774
64251 chr11 119050500 119050500 1 + C T UCEC 119050497 + 119050477 119050517 41 TTTCGAGAGGAGGACTACTACAACGATGATGTTCTGGACCA TTTCGAGAGGAGGACTACTACAATGATGATGTTCTGGACCA < 41bp 0.752010028710205 0.55116140828224 0.1163179 0.093497604 prediction 0.40169724085593 Functional Loss - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119050497 chr11:119050500 synonymous SNV . 0 24 hm5C_associated_SNPs_98307 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:119050476-119050500
64251 chrX 153664175 153664175 1 + A C BLCA 153664174 + 153664154 153664194 41 CTGCACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGA CTGCACATGATCCTCAGCCTCCAGACCATGGATCGCTTTGA < 41bp 0.700848148259 0.432627857312111 0.33146057 0.4253672 prediction 0.401696296517999 Functional Loss - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153664174 chrX:153664175 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_98309 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:153664131-153664175
64251 chr1 155292476 155292476 1 + C T HNSC 155292473 + 155292453 155292493 41 GGAGGATGGAGAAGTGACGTCAGCGAGGAGCCGGTGCCCCA GGAGGATGGAGAAGTGACGTCAGTGAGGAGCCGGTGCCCCA < 41bp 0.7722476223518 0.571400347982521 0.38540363 0.3289897 prediction 0.401694548738558 Functional Loss - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155292473 chr1:155292476 synonymous SNV . 0 24 hm5C_associated_SNPs_98310 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:155292445-155292483
64251 chr3 160939120 160939120 1 + G A rs12490149 160939117 + 160939097 160939137 41 TTCTCTGTGGCGGAGACAGCCAGGTTGGCAGCTGACGGGAC TTCTCTGTGGCGGAGACAGCCAGATTGGCAGCTGACGGGAC < 41bp 0.798755677191083 0.597912574024432 0.93468785 0.92882085 prediction 0.401686206333301 Functional Loss - NMD3 ENSG00000169251 splicing Human protein_coding chr3:160939117 chr3:160939120 . . 0 24 hm5C_associated_SNPs_98313 0 0 1 DDX3X POSTAR2 ENCODE chr3:160939098-160939198
64251 chr6 158363839 158363839 1 + G T COAD 158363835 + 158363815 158363855 41 CTTGTCAGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGC CTTGTCAGATTGCAGAAAAGCTGATGCAGGCCCTCAGCCGC < 41bp 0.700839752126285 0.496268495900834 0.8896085 0.8581792 prediction 0.40167950425257 Functional Loss - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158363835 chr6:158363839 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_98317 0 0 7 BUD13 POSTAR2 ENCODE chr6:158363798-158363855
64251 chr14 20811812 20811812 1 + G T LUAD 20811810 + 20811790 20811830 41 GTTCGAATTCCATGGCGGCGCGGCGGCGACGGAGCACCGGC GTTCGAATTCCATGGCGGCGCGTCGGCGACGGAGCACCGGC < 41bp 0.921729095999676 0.720891545004066 0.85740054 0.58503467 prediction 0.401675101991219 Functional Loss - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20811810 chr14:20811812 synonymous SNV . 0 23 hm5C_associated_SNPs_98319 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr14:20811811-20811812
64251 chr2 159313728 159313728 1 + A C rs562554933 159313724 + 159313704 159313744 41 GACGACGGCCGCTGCCTAAGCTGGAAAGTAAGTGTGTGGGC GACGACGGCCGCTGCCTAAGCTGGCAAGTAAGTGTGTGGGC < 41bp 0.817080701502125 0.616246870682691 0.20972493 0.34063733 prediction 0.401667661638869 Functional Loss - PKP4 ENSG00000144283 UTR5 Human protein_coding chr2:159313724 chr2:159313728 . . 0 25 hm5C_associated_SNPs_98322 0 0 5 CSTF2T POSTAR2 ENCODE chr2:159313695-159313734
64251 chr1 9775958 9775958 1 + C T LUSC 9775956 + 9775936 9775976 41 CCAGAAGTGAACGACTTTCGCGCCAAGATGTGCCAATTCTG CCAGAAGTGAACGACTTTCGCGTCAAGATGTGCCAATTCTG < 41bp 0.700833148383779 0.467991490135807 0.11834526 0.06925738 prediction 0.401666296767558 Functional Loss - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9775956 chr1:9775958 nonsynonymous SNV 0.562 0 23 hm5C_associated_SNPs_98323 0 0 1 GRWD1 POSTAR2 ENCODE chr1:9775947-9776014
64251 chr16 731820 731820 1 - C T UCEC 731823 - 731803 731843 41 TGGCTGTCGTCCTCATCACCCTCGTGGTTTCGCTGGCACTC TGGCTGTCGTCCTCATCACCCTCATGGTTTCGCTGGCACTC < 41bp 0.759828856986304 0.559002364864174 0.05380991 0.037959695 prediction 0.40165298424426 Functional Loss - STUB1 ENSG00000103266 CDS Human protein_coding chr16:731823 chr16:731820 synonymous SNV . 0 24 hm5C_associated_SNPs_98328 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:731738-731882
64251 chr17 57287555 57287555 1 + G T SARC 57287553 + 57287533 57287573 41 CCATGGCGGGAGGATGAGATCTGCGTTGTGGGAATCTTCGG CCATGGCGGGAGGATGAGATCTTCGTTGTGGGAATCTTCGG < 41bp 0.914971975464145 0.714145486275676 0.39216316 0.27328682 prediction 0.401652978376938 Functional Loss - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287553 chr17:57287555 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_98329 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:57287535-57287557
64251 chr1 110034099 110034099 1 + A C rs151133348 110034098 + 110034078 110034118 41 CTCCCCTCATCAGCTCCCCACACCAGTCAAGGCTTCTCAGC CTCCCCTCATCAGCTCCCCACCCCAGTCAAGGCTTCTCAGC < 41bp 0.700824391509071 0.435848672595838 0.073265165 0.03927368 prediction 0.401648783018141 Functional Loss - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110034098 chr1:110034099 synonymous SNV . 0 22 hm5C_associated_SNPs_98333 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr1:110034073-110034104
64251 chr11 64087313 64087313 1 + T C COAD 64087312 + 64087292 64087332 41 GGGTGTGCTGTTTGGAGTTCCTGGGGCCTTCACCCCTGGAT GGGTGTGCTGTTTGGAGTTCCCGGGGCCTTCACCCCTGGAT < 41bp 0.811476983449757 0.610653606718597 0.90733796 0.9303023 prediction 0.401646753462319 Functional Loss - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64087312 chr11:64087313 synonymous SNV . 0 22 hm5C_associated_SNPs_98335 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64087289-64087314
64251 chr1 226016540 226016540 1 + G T DLBC 226016536 + 226016516 226016556 41 TTGAAGATGGGTGGTGGGGGCCAGGCACGAGGTCCGCAGCC TTGAAGATGGGTGGTGGGGGCCAGTCACGAGGTCCGCAGCC < 41bp 0.700814994081747 0.486735224588907 0.8533632 0.39367247 prediction 0.401629988163493 Functional Loss - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016536 chr1:226016540 nonsynonymous SNV 0.005 4 25 hm5C_associated_SNPs_98340 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:226016537-226016595
64251 chr17 8168440 8168440 1 + C T UCEC 8168438 + 8168418 8168458 41 TGTTTGCTCTGGTCACTGACCTCCGGGTGAGTTCTCCCACA TGTTTGCTCTGGTCACTGACCTTCGGGTGAGTTCTCCCACA < 41bp 0.700811256756167 0.416863328093591 0.8996805 0.409696 prediction 0.401622513512333 Functional Loss - PFAS ENSG00000178921 CDS Human protein_coding chr17:8168438 chr17:8168440 synonymous SNV . 0 23 hm5C_associated_SNPs_98343 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:8168420-8168440
64251 chr3 50608616 50608616 1 + C T STAD 50608613 + 50608593 50608633 41 AGTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACC AGTACCCGGGGCTGGGCCTTCAGTTCATGGCAACCCCAACC < 41bp 0.722323901759815 0.521514652062666 0.63848215 0.52454555 prediction 0.401618499394297 Functional Loss - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50608613 chr3:50608616 synonymous SNV . 0 24 hm5C_associated_SNPs_98345 0 0 2 BUD13 POSTAR2 ENCODE chr3:50608558-50608632
64251 chr5 75967669 75967669 1 + G A OV 75967666 + 75967646 75967686 41 TCAGCTTCAATAGAGGTGCCCGGGGACAGAACACCCTGCGC TCAGCTTCAATAGAGGTGCCCGGAGACAGAACACCCTGCGC < 41bp 0.700806277606863 0.458569066459953 0.9077022 0.8485813 prediction 0.401612555213725 Functional Loss - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75967666 chr5:75967669 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_98351 0 0 5 DDX55 POSTAR2 ENCODE chr5:75967607-75967691
64251 chr7 116380017 116380017 1 + G A LGG 116380014 + 116379994 116380034 41 TGCTGTTTAGGTTGTGGTTTCTCGATCAGGACCATCAACCC TGCTGTTTAGGTTGTGGTTTCTCAATCAGGACCATCAACCC < 41bp 0.763682039916811 0.562880059412414 0.5933618 0.63146436 prediction 0.401603961008793 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116380014 chr7:116380017 nonsynonymous SNV 0.572 4 24 hm5C_associated_SNPs_98354 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr7:116380017-116380041
64251 chr11 376456 376456 1 + G A STAD 376453 + 376433 376473 41 ACGAGGACGAGGGGGAGCTGCTCGACAGCCTGGAGCCCACC ACGAGGACGAGGGGGAGCTGCTCAACAGCCTGGAGCCCACC < 41bp 0.825735395977693 0.624934331791804 0.85065246 0.89653707 prediction 0.401602128371778 Functional Loss - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:376453 chr11:376456 nonsynonymous SNV 0.416 2 24 hm5C_associated_SNPs_98355 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:376419-376456
64251 chr1 149858710 149858710 1 + G T BLCA 149858706 + 149858686 149858726 41 GGTCCTCGAGTACCTGACCGCCGAGATCCTGGAGCTGGCGG GGTCCTCGAGTACCTGACCGCCGATATCCTGGAGCTGGCGG < 41bp 0.707249266243405 0.506455694612252 0.6158514 0.21857512 prediction 0.401587143262306 Functional Loss - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858706 chr1:149858710 nonsynonymous SNV 0.797 4 25 hm5C_associated_SNPs_98365 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:149858679-149858710
64251 chr8 23112846 23112846 1 + C T BLCA 23112844 + 23112824 23112864 41 CCCTGTCAGAGCTCAGCACCCTCTGTGCTAACTCCTGCCCA CCCTGTCAGAGCTCAGCACCCTTTGTGCTAACTCCTGCCCA < 41bp 0.700788770053835 0.41459024434812 0.2508443 0.26848117 prediction 0.40157754010767 Functional Loss - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112844 chr8:23112846 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_98371 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:23112835-23112860
64251 chr5 14713005 14713005 1 - G A COAD 14713008 - 14712988 14713028 41 ATCCACCATGGTCGCCATCGCTGCGTGCTATGTCTACCGGA ATCCACCATGGTCGCCATCGCTGTGTGCTATGTCTACCGGA < 41bp 0.761176003942452 0.560393906307428 0.43163332 0.3253947 prediction 0.401564195270049 Functional Loss - ANKH ENSG00000154122 CDS Human protein_coding chr5:14713008 chr5:14713005 nonsynonymous SNV 0.239 2 24 hm5C_associated_SNPs_98378 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:14713001-14713035
64251 chr7 75511493 75511493 1 + G A SKCM 75511490 + 75511470 75511510 41 CCGTGGCTCCTGCTGGGTGCCTCGTGGCTCATTCCCCAGAC CCGTGGCTCCTGCTGGGTGCCTCATGGCTCATTCCCCAGAC < 41bp 0.831213165696841 0.630438071331248 0.29685163 0.13660038 prediction 0.401550188731187 Functional Loss - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75511490 chr7:75511493 synonymous SNV . 0 24 hm5C_associated_SNPs_98384 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:75511459-75511499
64251 chr16 56969209 56969209 1 + G T LGG 56969206 + 56969186 56969226 41 TTGTTGGATCACCAATGTCTCAGGGACTTGCTTCCAAAGGT TTGTTGGATCACCAATGTCTCAGTGACTTGCTTCCAAAGGT < 41bp 0.700774961759181 0.310932790562384 0.93531007 0.4713448 prediction 0.401549923518361 Functional Loss - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56969206 chr16:56969209 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_98385 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:56969154-56969219
64251 chr16 67911480 67911480 1 + G T SARC 67911478 + 67911458 67911498 41 AACCACTTTCGCAGGATCATCTGGTGCCCCTTCATCCCTGA AACCACTTTCGCAGGATCATCTTGTGCCCCTTCATCCCTGA < 41bp 0.700774231780963 0.374554825073548 0.5109796 0.04445222 prediction 0.401548463561927 Functional Loss - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67911478 chr16:67911480 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_98387 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:67911457-67911480
64251 chr6 37298895 37298895 1 + G T LUAD 37298891 + 37298871 37298911 41 GAAATTGGGCTGCTTCTCGCCGAGGCATACAGACTCAAGTA GAAATTGGGCTGCTTCTCGCCGAGTCATACAGACTCAAGTA < 41bp 0.738251295952634 0.537477776905971 0.42500398 0.08904046 prediction 0.401547038093326 Functional Loss - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37298891 chr6:37298895 nonsynonymous SNV 0.860 4 25 hm5C_associated_SNPs_98388 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:37298869-37298902
64251 chr11 118962207 118962207 1 + C T UCEC 118962204 + 118962184 118962224 41 TCCTGGCAACAGCTGGCCTGCAGCGCATGGGCTGGCACAAC TCCTGGCAACAGCTGGCCTGCAGTGCATGGGCTGGCACAAC < 41bp 0.700771774537733 0.498195120770225 0.5402202 0.43562502 prediction 0.401543549075466 Functional Loss - HMBS ENSG00000256269 CDS Human protein_coding chr11:118962204 chr11:118962207 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_98389 1 0 8 BUD13 POSTAR2 ENCODE chr11:118962186-118962231
64251 chr13 88329538 88329538 1 + C T UCEC 88329535 + 88329515 88329555 41 ACCCTCCTCTATCCAGGTCCCTGCGAGGACCAGCGCCGTGA ACCCTCCTCTATCCAGGTCCCTGTGAGGACCAGCGCCGTGA < 41bp 0.762121777991301 0.561351558336526 0.3625789 0.434112 prediction 0.40154043930955 Functional Loss - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329535 chr13:88329538 nonsynonymous SNV 0.038 0 24 hm5C_associated_SNPs_98390 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88329500-88329540
64251 chr9 711559 711559 1 + G A UCEC 711556 + 711536 711576 41 CCATGCACCTGCAGCACATCCGCGAGCAGATGGCCATTGCT CCATGCACCTGCAGCACATCCGCAAGCAGATGGCCATTGCT < 41bp 0.792626638833455 0.591856794991955 0.19999126 0.09535617 prediction 0.401539687683 Functional Loss - KANK1 ENSG00000107104 CDS Human protein_coding chr9:711556 chr9:711559 nonsynonymous SNV 0.980 4 24 hm5C_associated_SNPs_98391 0 0 3 EIF3H POSTAR2 ENCODE chr9:711523-711581
64251 chr16 67919731 67919731 1 + C T PRAD 67919728 + 67919708 67919748 41 CGCTTGGGGGACAGCATGGGCCGCGGAGGCGAGCTGGAGAC CGCTTGGGGGACAGCATGGGCCGTGGAGGCGAGCTGGAGAC < 41bp 0.730116973820184 0.5293490212974 0.32419586 0.29295653 prediction 0.401535905045568 Functional Loss - NRN1L ENSG00000188038 CDS Human protein_coding chr16:67919728 chr16:67919731 synonymous SNV . 0 24 hm5C_associated_SNPs_98396 0 0 1 SF3B1 POSTAR2 ENCODE chr16:67919718-67919737
64251 chr20 2844831 2844831 1 + G A ESCA 2844828 + 2844808 2844848 41 TCCTTCTCACCTCACAGCTGCTGGAGTATGAGCCACGCTCA TCCTTCTCACCTCACAGCTGCTGAAGTATGAGCCACGCTCA < 41bp 0.83352191602235 0.632754118164415 0.7658441 0.291835 prediction 0.40153559571587 Functional Loss - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2844828 chr20:2844831 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98397 0 0 3 BUD13 POSTAR2 ENCODE chr20:2844810-2844851
64251 chr6 36178226 36178226 1 + C T BLCA 36178223 + 36178203 36178243 41 GCCCGGCGGCAGGCAGAGAACATCGGCTATGACCCCGAGAG GCCCGGCGGCAGGCAGAGAACATTGGCTATGACCCCGAGAG < 41bp 0.700767558793416 0.488985149130825 0.37244508 0.31392896 prediction 0.401535117586832 Functional Loss - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36178223 chr6:36178226 synonymous SNV . 0 24 hm5C_associated_SNPs_98398 0 0 2 FXR2 POSTAR2 ENCODE chr6:36178211-36178269
64251 chr2 171705804 171705804 1 + G A SKCM 171705801 + 171705781 171705821 41 TCTCTGTCCCCACAGGCTGCCTGGGGAGGTGGGCTGCTCAT TCTCTGTCCCCACAGGCTGCCTGAGGAGGTGGGCTGCTCAT < 41bp 0.817711600132167 0.616944483287247 0.435654 0.2548529 prediction 0.40153423368984 Functional Loss - GAD1 ENSG00000128683 CDS Human protein_coding chr2:171705801 chr2:171705804 stopgain 0.999 1 24 hm5C_associated_SNPs_98399 0 0 1 U2AF2 POSTAR2 ENCODE chr2:171705778-171705828
64251 chr1 86047055 86047055 1 + C T BLCA 86047053 + 86047033 86047073 41 TTCTCCCCCTTCCAGGCGCTCTCCACCTGCCCCGCTGCCTG TTCTCCCCCTTCCAGGCGCTCTTCACCTGCCCCGCTGCCTG < 41bp 0.850537068472492 0.649773506115758 0.9281288 0.2315825 prediction 0.401527124713468 Functional Loss - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047053 chr1:86047055 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_98402 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86047040-86047060
64251 chr2 153575171 153575171 1 + T C LUAD 153575170 + 153575150 153575190 41 TGAGAGCGGGTGGCGGTCGGCTCTGCGGCGCCGCGGTCCCG TGAGAGCGGGTGGCGGTCGGCCCTGCGGCGCCGCGGTCCCG < 41bp 0.771182367570784 0.570419091264524 0.5379063 0.25386396 prediction 0.401526552612519 Functional Loss - ARL6IP6 ENSG00000177917 CDS Human protein_coding chr2:153575170 chr2:153575171 synonymous SNV . 0 22 hm5C_associated_SNPs_98403 0 0 12 CSTF2T POSTAR2 ENCODE chr2:153575128-153575203
64251 chr10 96306165 96306165 1 + G T LUAD 96306163 + 96306143 96306183 41 CTCCAGCAATGGTTGAACAACTGGACACTGCTGTGATTACC CTCCAGCAATGGTTGAACAACTTGACACTGCTGTGATTACC < 41bp 0.910027702433065 0.709272041008913 0.5533955 0.13235572 prediction 0.401511322848304 Functional Loss - HELLS ENSG00000119969 CDS Human protein_coding chr10:96306163 chr10:96306165 synonymous SNV . 0 23 hm5C_associated_SNPs_98410 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:96306146-96306183
64251 chr3 128971486 128971486 1 + G A STAD 128971483 + 128971463 128971503 41 CAGGGGGAGCACCTGGGGACCACGGAAGCGACCGAGGCCTT CAGGGGGAGCACCTGGGGACCACAGAAGCGACCGAGGCCTT < 41bp 0.75769869177517 0.556951990792418 0.4093604 0.26460046 prediction 0.401493401965505 Functional Loss - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128971483 chr3:128971486 synonymous SNV . 0 24 hm5C_associated_SNPs_98416 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:128971463-128971508
64251 chr16 67231786 67231786 1 + G T UCEC 67231782 + 67231762 67231802 41 ATTCCCAGAGTGCATGAGCTCGGAGCTGCTGGAGGAGTTGA ATTCCCAGAGTGCATGAGCTCGGATCTGCTGGAGGAGTTGA < 41bp 0.70947804005679 0.508738573994912 0.8861192 0.43236277 prediction 0.401478932123755 Functional Loss - E2F4 ENSG00000205250 CDS Human protein_coding chr16:67231782 chr16:67231786 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_98419 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67231774-67231801
64251 chr19 32845641 32845641 1 + G A UCEC 32845638 + 32845618 32845658 41 AACAATGTGGTGGAATACATCCCGAATGCTGAACGACCCTA AACAATGTGGTGGAATACATCCCAAATGCTGAACGACCCTA < 41bp 0.700738761732038 0.464195237962823 0.25021204 0.26182577 prediction 0.401477523464077 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32845638 chr19:32845641 synonymous SNV . 0 24 hm5C_associated_SNPs_98420 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:32845514-32845667
64251 chr19 32845640 32845640 1 + C T UCEC 32845638 + 32845618 32845658 41 AACAATGTGGTGGAATACATCCCGAATGCTGAACGACCCTA AACAATGTGGTGGAATACATCCTGAATGCTGAACGACCCTA < 41bp 0.700738761732038 0.418123738211549 0.25021204 0.22959733 prediction 0.401477523464077 Functional Loss - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32845638 chr19:32845640 nonsynonymous SNV 0.229 4 23 hm5C_associated_SNPs_98421 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:32845514-32845667
64251 chr12 133291561 133291561 1 + C T BLCA 133291558 + 133291538 133291578 41 GCCACGCGGCACATCTTCCTCATCAGGCATTCCCAGTACCA GCCACGCGGCACATCTTCCTCATTAGGCATTCCCAGTACCA < 41bp 0.700736934663683 0.48666407088881 0.14971969 0.16047665 prediction 0.401473869327367 Functional Loss - PGAM5 ENSG00000176894;ENSG00000247077 CDS Human other chr12:133291558 chr12:133291561 stopgain . 0 24 hm5C_associated_SNPs_98424 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:133291444-133291597
64251 chr21 46640848 46640848 1 + G A UCEC 46640845 + 46640825 46640865 41 GCTATTGAGGTCATCAACGCCACGACTGGGAAGGATGAGCT GCTATTGAGGTCATCAACGCCACAACTGGGAAGGATGAGCT < 41bp 0.778878612804743 0.578141966258203 0.101275146 0.25144637 prediction 0.401473293093081 Functional Loss - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46640845 chr21:46640848 synonymous SNV . 0 24 hm5C_associated_SNPs_98426 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr21:46640834-46640873
64251 chr19 33167232 33167232 1 + C T BLCA 33167230 + 33167210 33167250 41 ACAAGACGACTGCGTGCTACCACCACCTGGTGCTGACCGTC ACAAGACGACTGCGTGCTACCATCACCTGGTGCTGACCGTC < 41bp 0.848382263903993 0.64765053284612 0.0730885 0.039054304 prediction 0.401463462115747 Functional Loss - RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167230 chr19:33167232 synonymous SNV . 0 23 hm5C_associated_SNPs_98437 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr9 131446266 131446266 1 + C T UCEC 131446263 + 131446243 131446283 41 ACCGGAGGAGACATCGGCCTCTGCAGGCTTGCCGAAGAAGG ACCGGAGGAGACATCGGCCTCTGTAGGCTTGCCGAAGAAGG < 41bp 0.745341688141286 0.544610331282031 0.22676569 0.25644392 prediction 0.401462713718509 Functional Loss - SET ENSG00000119335 CDS Human protein_coding chr9:131446263 chr9:131446266 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_98438 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131446222-131446277
64251 chr12 53647784 53647784 1 + G T SARC 53647781 + 53647761 53647801 41 TCCGGGTACCTCTGCACTCACTGGCTTGCCTAGGGCTCCTT TCCGGGTACCTCTGCACTCACTGTCTTGCCTAGGGCTCCTT < 41bp 0.700730401428637 0.301991664033546 0.3361959 0.08642945 prediction 0.401460802857274 Functional Loss - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647781 chr12:53647784 nonsynonymous SNV 0.974 2 24 hm5C_associated_SNPs_98440 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr12:53647774-53647792
64251 chr14 24108409 24108409 1 + A T rs555965971 24108407 + 24108387 24108427 41 GGATCGGCTTTGCCATCGCCCGACGTCTGGCCCGGGACGGG GGATCGGCTTTGCCATCGCCCGTCGTCTGGCCCGGGACGGG < 41bp 0.734243790097976 0.533518778275706 0.413896 0.19293621 prediction 0.401450023644539 Functional Loss - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108407 chr14:24108409 synonymous SNV . 0 23 hm5C_associated_SNPs_98444 0 0 6 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr16 29675507 29675507 1 + C T LUAD 29675505 + 29675485 29675525 41 ACCAGTGGAGCCCCTGTTACCACGGCAGCTAGCTCTCTGGA ACCAGTGGAGCCCCTGTTACCATGGCAGCTAGCTCTCTGGA < 41bp 0.823679640106943 0.622957552057216 0.9092839 0.8774419 prediction 0.401444176099454 Functional Loss - SPN ENSG00000197471 CDS Human protein_coding chr16:29675505 chr16:29675507 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_98445 0 0 4 SND1 POSTAR2 ENCODE chr16:29675476-29675549
64251 chr16 24834213 24834213 1 + C T COAD 24834210 + 24834190 24834230 41 CCTAGATCGATGGCTCAACTCTGCGCACTCTGTGCATGCAG CCTAGATCGATGGCTCAACTCTGTGCACTCTGTGCATGCAG < 41bp 0.700716288573067 0.478432562749137 0.27618372 0.15465167 prediction 0.401432577146135 Functional Loss - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24834210 chr16:24834213 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_98452 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:24834197-24834220
64251 chr8 21905709 21905709 1 + C T UCEC 21905706 + 21905686 21905726 41 AAGCAGTTCGAGTTTGTGGGCTCCGCCCCCACCCGCCGGAC AAGCAGTTCGAGTTTGTGGGCTCTGCCCCCACCCGCCGGAC < 41bp 0.717479026127868 0.516763251243976 0.09582901 0.17026618 prediction 0.401431549767783 Functional Loss - FGF17 ENSG00000158815 CDS Human protein_coding chr8:21905706 chr8:21905709 synonymous SNV . 0 24 hm5C_associated_SNPs_98454 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:21905697-21905723
64251 chr15 22954272 22954272 1 + C T COAD 22954270 + 22954250 22954290 41 GGATGGAGAGCGTGTTCAACCACGCCATCCGGCACACCGTC GGATGGAGAGCGTGTTCAACCATGCCATCCGGCACACCGTC < 41bp 0.700714126407887 0.420721445365548 0.24076223 0.16696808 prediction 0.401428252815774 Functional Loss - CYFIP1 ENSG00000068793 CDS Human other chr15:22954270 chr15:22954272 synonymous SNV . 0 23 hm5C_associated_SNPs_98457 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:22954256-22954281
64251 chr15 38591738 38591738 1 + G T SARC 38591736 + 38591716 38591756 41 TTTATCCGTGGAGAGCGACTCAGGGACAAAATGGTAATGAA TTTATCCGTGGAGAGCGACTCATGGACAAAATGGTAATGAA < 41bp 0.700712515927041 0.359812780937173 0.92702913 0.37034607 prediction 0.401425031854082 Functional Loss - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591736 chr15:38591738 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_98459 0 0 2 PPIG POSTAR2 ENCODE chr15:38591672-38591747
64251 chr7 50450322 50450322 1 + G A HNSC 50450319 + 50450299 50450339 41 CCGGCACATCAAGCTGCATTCCGGGGAGAAGCCCTTCAAAT CCGGCACATCAAGCTGCATTCCGAGGAGAAGCCCTTCAAAT < 41bp 0.761757539341834 0.561046092966483 0.93432474 0.7500121 prediction 0.401422892750701 Functional Loss - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50450319 chr7:50450322 nonsynonymous SNV 0.991 4 24 hm5C_associated_SNPs_98460 0 0 4 FMR1 POSTAR2 ENCODE chr7:50450287-50450399
64251 chr3 30713258 30713258 1 + C T LUSC 30713255 + 30713235 30713275 41 ACTGCTACCGCGTTAACCGGCAGCAGAAGCTGAGTTCAACC ACTGCTACCGCGTTAACCGGCAGTAGAAGCTGAGTTCAACC < 41bp 0.700707863040478 0.471733363408624 0.42363787 0.27848163 prediction 0.401415726080957 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713255 chr3:30713258 stopgain 0.998 1 24 hm5C_associated_SNPs_98464 0 0 1 RBM15 POSTAR2 ENCODE chr3:30713230-30713283
64251 chr1 10689811 10689811 1 + G C CESC 10689807 + 10689787 10689827 41 CTGGGCCCCCAGGAGGAAGGCGAGGGGGTGGTGGACGTCAA CTGGGCCCCCAGGAGGAAGGCGAGCGGGTGGTGGACGTCAA < 41bp 0.86612653696763 0.665420018256687 0.8089497 0.64168656 prediction 0.401413037421886 Functional Loss - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10689807 chr1:10689811 nonsynonymous SNV 0.968 1 25 hm5C_associated_SNPs_98467 0 0 1 RPS3 POSTAR2 ENCODE chr1:10689694-10689874
64251 chr19 4793012 4793012 1 + C T UCEC 4793010 + 4792990 4793030 41 TGTTGATCCGGGAGCGCATCCTCGGTCCCTCGCACCCGGAC TGTTGATCCGGGAGCGCATCCTTGGTCCCTCGCACCCGGAC < 41bp 0.8475099679532 0.646804191367906 0.358895 0.4003908 prediction 0.401411553170588 Functional Loss - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793010 chr19:4793012 synonymous SNV . 0 23 hm5C_associated_SNPs_98468 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:4792995-4793016
64251 chr19 50185259 50185259 1 + C T COAD 50185256 + 50185236 50185276 41 AAGGACAAGGTGGTGCTGGACGTCGGCTCGGGCACCGGCAT AAGGACAAGGTGGTGCTGGACGTTGGCTCGGGCACCGGCAT < 41bp 0.70070353303858 0.491951136300101 0.4995654 0.50356966 prediction 0.40140706607716 Functional Loss - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50185256 chr19:50185259 synonymous SNV . 0 24 hm5C_associated_SNPs_98469 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819214 chr19:50185220-50185300
64251 chr20 60861650 60861650 1 + C T PAAD 60861647 + 60861627 60861667 41 TCTGTGTTTCAGGATGAAGACTCCGGGAAGGCTGACAGCGA TCTGTGTTTCAGGATGAAGACTCTGGGAAGGCTGACAGCGA < 41bp 0.797932937578012 0.597229601391937 0.4520639 0.34555805 prediction 0.401406672372151 Functional Loss - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60861647 chr20:60861650 synonymous SNV . 0 24 hm5C_associated_SNPs_98470 0 0 1 RBM5 POSTAR2 ENCODE chr20:60861576-60861681
64251 chr3 96533668 96533668 1 + G T UCEC 96533665 + 96533645 96533685 41 GAGGAGGAAGAAGACGTGGACAAGGACCCCCATCCTACCCA GAGGAGGAAGAAGACGTGGACAATGACCCCCATCCTACCCA < 41bp 0.70069440082878 0.372214157924133 0.8451519 0.33989525 prediction 0.401388801657559 Functional Loss - EPHA6 ENSG00000080224 CDS Human protein_coding chr3:96533665 chr3:96533668 nonsynonymous SNV 0.427 1 24 hm5C_associated_SNPs_98476 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:96533660-96533680
64251 chr14 105717200 105717200 1 + G A rs76764869 105717197 + 105717177 105717217 41 GATTGGAGTCTTAGGCATCTCTGGTACAGTGGGGTGCACGT GATTGGAGTCTTAGGCATCTCTGATACAGTGGGGTGCACGT < 41bp 0.793582682447441 0.592894403232069 0.37513518 0.096426964 prediction 0.401376558430743 Functional Loss - BTBD6 ENSG00000184887 UTR3 Human protein_coding chr14:105717197 chr14:105717200 . . 0 24 hm5C_associated_SNPs_98478 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:105717184-105717233
64251 chr5 118872184 118872184 1 + C T rs28943592 118872181 + 118872161 118872201 41 TGCAAAAGGTGCTGCTGATACAACAATCATACTTTCAGATG TGCAAAAGGTGCTGCTGATACAATAATCATACTTTCAGATG < 41bp 0.755731026744014 0.555050972480391 0.06219688 0.13663018 prediction 0.401360108527244 Functional Loss - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118872181 chr5:118872184 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_98488 3 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:118872145-118872184
64251 chr8 102381419 102381419 1 + C T rs10108277 102381416 + 102381396 102381436 41 GTTACAGGAGTTACTAGAGTCACCATCCGGAAATCTAAGAA GTTACAGGAGTTACTAGAGTCACTATCCGGAAATCTAAGAA < 41bp 0.744859199341311 0.544181860039744 0.034291655 0.040845364 prediction 0.401354678603134 Functional Loss - NACAP1 ENSG00000228224 ncRNA_exonic Human transcribed_processed_pseudogene chr8:102381416 chr8:102381419 . . 0 24 hm5C_associated_SNPs_98492 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:102381398-102381427
64251 chr6 71570003 71570003 1 + C T UCEC 71570000 + 71569980 71570020 41 AGCAGGATGGTCTGGAAGCTCATCAGGTCAGACTCTCAGCA AGCAGGATGGTCTGGAAGCTCATTAGGTCAGACTCTCAGCA < 41bp 0.762699743383343 0.562023622446782 0.23765314 0.2565566 prediction 0.401352241873122 Functional Loss - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71570000 chr6:71570003 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_98493 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr6:71569977-71570005
64251 chr16 843165 843165 1 + C T COAD 843162 + 843142 843182 41 AGTTCCTGTACAGCCGGGGCCAGCGGGAGCTGAGCGTGCGG AGTTCCTGTACAGCCGGGGCCAGTGGGAGCTGAGCGTGCGG < 41bp 0.711738000843805 0.511062221045014 0.9055783 0.8888186 prediction 0.401351559597582 Functional Loss - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:843162 chr16:843165 nonsynonymous SNV 0.198 1 24 hm5C_associated_SNPs_98494 0 0 5 DDX24 POSTAR2 ENCODE chr16:843143-843168
64251 chr17 37646908 37646908 1 + G A LUAD 37646905 + 37646885 37646925 41 TCCTCTCCCTCCAGAGCTCCCTGGTGGAGATCTGTCTCCCC TCCTCTCCCTCCAGAGCTCCCTGATGGAGATCTGTCTCCCC < 41bp 0.700675433397929 0.465368016754545 0.049461365 0.020518124 prediction 0.401350866795858 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37646905 chr17:37646908 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_98495 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:37646900-37646920
64251 chr17 37646907 37646907 1 + G T LUAD 37646905 + 37646885 37646925 41 TCCTCTCCCTCCAGAGCTCCCTGGTGGAGATCTGTCTCCCC TCCTCTCCCTCCAGAGCTCCCTTGTGGAGATCTGTCTCCCC < 41bp 0.700675433397929 0.353192969276503 0.049461365 0.020805806 prediction 0.401350866795858 Functional Loss - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37646905 chr17:37646907 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_98496 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:37646900-37646920
64251 chr5 40681185 40681185 1 + C T UCEC 40681182 + 40681162 40681202 41 ATCCCGGCGGTGATGTTCATCTTCGGGGTGGTGGGCAACCT ATCCCGGCGGTGATGTTCATCTTTGGGGTGGTGGGCAACCT < 41bp 0.700668096105664 0.487450381220611 0.4350397 0.33255175 prediction 0.401336192211329 Functional Loss - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681182 chr5:40681185 synonymous SNV . 0 24 hm5C_associated_SNPs_98502 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:40681176-40681203
64251 chr2 73471796 73471796 1 + C T KIRP 73471793 + 73471773 73471813 41 TGATGATGCTCGATGATTTGCTGCAGCTTAAAATGATTGGA TGATGATGCTCGATGATTTGCTGTAGCTTAAAATGATTGGA < 41bp 0.78348678955298 0.582830443017846 0.035550594 0.008152306 prediction 0.401312693070268 Functional Loss - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471793 chr2:73471796 stopgain 1.000 1 24 hm5C_associated_SNPs_98512 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr2:73471700-73471801
64251 chr16 89627081 89627081 1 + G A rs576742925 89627078 + 89627058 89627098 41 TATCATCCCAGAGTGCATTGCGGGGCCGCTTCCTTTCCGCT TATCATCCCAGAGTGCATTGCGGAGCCGCTTCCTTTCCGCT < 41bp 0.833048175499704 0.632396477631933 0.93821675 0.924512 prediction 0.401303395735542 Functional Loss - RPL13 ENSG00000167526 UTR5 Human protein_coding chr16:89627078 chr16:89627081 . . 0 24 hm5C_associated_SNPs_98517 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:89627060-89627100
64251 chr19 57955624 57955624 1 + G A rs61997241 57955621 + 57955601 57955641 41 TGTTTATGGACAGCTTCACACTCGGTAGACATCAGAGAGTT TGTTTATGGACAGCTTCACACTCAGTAGACATCAGAGAGTT < 41bp 0.8253412690478 0.624694915749236 0.0270167 0.0056838393 prediction 0.401292706597129 Functional Loss - ZNF749 ENSG00000186230 CDS Human protein_coding chr19:57955621 chr19:57955624 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_98522 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:57955603-57955625
64251 chr8 125551447 125551447 1 + G T BRCA 125551444 + 125551424 125551464 41 CGTAATGGCGTTCTTGGCGTCGGGACCCTACCTGACCCATC CGTAATGGCGTTCTTGGCGTCGGTACCCTACCTGACCCATC < 41bp 0.935857965299737 0.735211624110179 0.8717724 0.26594403 prediction 0.401292682379115 Functional Loss - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125551444 chr8:125551447 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_98523 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819211 chr8:125551360-125551500
64251 chr19 21240755 21240755 1 + C T rs148734911 21240752 + 21240732 21240772 41 CCCTACAACTGTGAAGAATACGGCAAAGCTTTCAACCAGTC CCCTACAACTGTGAAGAATACGGTAAAGCTTTCAACCAGTC < 41bp 0.743070709253381 0.542429953817099 0.17700285 0.15015826 prediction 0.401281510872564 Functional Loss - ZNF430 ENSG00000118620 CDS Human protein_coding chr19:21240752 chr19:21240755 synonymous SNV . 0 24 hm5C_associated_SNPs_98526 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:21240747-21240777
64251 chr11 9482530 9482530 1 + C T rs7107607 9482528 + 9482508 9482548 41 CTGGGGGCGGGCCTCAGACACACTATGCGGGTTGCGGGGCC CTGGGGGCGGGCCTCAGACACATTATGCGGGTTGCGGGGCC < 41bp 0.822469226343065 0.621832774732908 0.7383777 0.8230214 prediction 0.401272903220314 Functional Loss - ZNF143 ENSG00000166478 UTR5 Human protein_coding chr11:9482528 chr11:9482530 . . 0 23 hm5C_associated_SNPs_98529 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:9482530-9482531
64251 chrX 68060503 68060503 1 + C T rs2230423 68060501 + 68060481 68060521 41 TCTACTACAAGGTCTGAGTGCCCGGCACGGCCTCAGGCCCC TCTACTACAAGGTCTGAGTGCCTGGCACGGCCTCAGGCCCC < 41bp 0.700634658619778 0.449065235477382 0.20031583 0.29816142 prediction 0.401269317239557 Functional Loss - EFNB1 ENSG00000090776 UTR3 Human protein_coding chrX:68060501 chrX:68060503 . . 0 23 hm5C_associated_SNPs_98531 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:68060476-68060504
64251 chrX 38665013 38665013 1 + T C rs574351078 38665012 + 38664992 38665032 41 CTATGTTGGTGGGAATGGGACTGGGCTGACGCCCTGCATTC CTATGTTGGTGGGAATGGGACCGGGCTGACGCCCTGCATTC < 41bp 0.747719020542127 0.547088139567661 0.89197034 0.8933682 prediction 0.401261761948931 Functional Loss - MID1IP1 ENSG00000165175 UTR3 Human protein_coding chrX:38665012 chrX:38665013 . . 0 22 hm5C_associated_SNPs_98533 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:38664992-38665024
64251 chr12 123950153 123950153 1 + C T rs73412248 123950150 + 123950130 123950170 41 AAAGCGGGCAGCATTGATGGCACCGATGAAGACCCACACGA AAAGCGGGCAGCATTGATGGCACTGATGAAGACCCACACGA < 41bp 0.700630758059803 0.499581444106152 0.07556003 0.17790851 prediction 0.401261516119606 Functional Loss - SNRNP35 ENSG00000184209 CDS Human protein_coding chr12:123950150 chr12:123950153 synonymous SNV . 0 24 hm5C_associated_SNPs_98534 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:123950152-123950153
64251 chrX 48558788 48558788 1 + C T UCEC 48558786 + 48558766 48558806 41 GGTGGACCTGGACGGCCCTCCGCGGGCCTTCGTGTACATCA GGTGGACCTGGACGGCCCTCCGTGGGCCTTCGTGTACATCA < 41bp 0.859709120808677 0.659078626669435 0.87443054 0.3656674 prediction 0.401260988278484 Functional Loss - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48558786 chrX:48558788 nonsynonymous SNV 0.328 5 23 hm5C_associated_SNPs_98535 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:48558773-48558804
64251 chr6 32822044 32822044 1 + G A rs565577500 32822041 + 32822021 32822061 41 AGCACCAACCGGGGACTTACCCCGGGCGGGAGAAGTCCACA AGCACCAACCGGGGACTTACCCCAGGCGGGAGAAGTCCACA < 41bp 0.766048277310941 0.565422251155039 0.91911733 0.8932922 prediction 0.401252052311804 Functional Loss - PSMB9 ENSG00000240065 CDS Human protein_coding chr6:32822041 chr6:32822044 nonsynonymous SNV 0.138 0 24 hm5C_associated_SNPs_98537 0 0 1 DDX3X POSTAR2 ENCODE chr6:32821964-32822050
64251 chr22 50637922 50637922 1 + G A rs6712 50637919 + 50637899 50637939 41 TCTGGTTGTGTCTGTGCCGACTCGGTGTTGAATCAAATCAG TCTGGTTGTGTCTGTGCCGACTCAGTGTTGAATCAAATCAG < 41bp 0.740005132554871 0.539382992804595 0.10790688 0.061162293 prediction 0.401244279500552 Functional Loss - TRABD ENSG00000273253 ncRNA_intronic Human antisense chr22:50637919 chr22:50637922 . . 0 24 hm5C_associated_SNPs_98539 0 0 29 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50637870-50637929
64251 chr10 3146127 3146127 1 + C T UCEC 3146125 + 3146105 3146145 41 GTCGTCGACGCCATCATGACCACGGCCCAGAGGTAAAGCGC GTCGTCGACGCCATCATGACCATGGCCCAGAGGTAAAGCGC < 41bp 0.700616438283797 0.450012871826399 0.21459633 0.08900431 prediction 0.401232876567595 Functional Loss - PFKP ENSG00000067057 CDS Human protein_coding chr10:3146125 chr10:3146127 nonsynonymous SNV 0.892 5 23 hm5C_associated_SNPs_98543 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:3146094-3146132
64251 chr11 69462901 69462901 1 + G A SKCM 69462898 + 69462878 69462918 41 CGCTTCCTCTCCAGAGTGATCAAGTGTGACCCGGTAAGTGA CGCTTCCTCTCCAGAGTGATCAAATGTGACCCGGTAAGTGA < 41bp 0.700613735096216 0.450423452744341 0.89501774 0.7272949 prediction 0.401227470192433 Functional Loss - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69462898 chr11:69462901 synonymous SNV . 0 24 hm5C_associated_SNPs_98545 0 0 1 PRPF8 POSTAR2 ENCODE chr11:69462899-69462957
64251 chr1 24117721 24117721 1 + G A rs539091809 24117718 + 24117698 24117738 41 AGGAGAATCGCCCAAGCGGCCTCGGAAGTCCCAGGGAGTGG AGGAGAATCGCCCAAGCGGCCTCAGAAGTCCCAGGGAGTGG < 41bp 0.739164787897516 0.538558617726347 0.18882951 0.11639908 prediction 0.401212340342337 Functional Loss - LYPLA2 ENSG00000011009 UTR5 Human protein_coding chr1:24117718 chr1:24117721 . . 0 24 hm5C_associated_SNPs_98556 0 0 7 DDX3X POSTAR2 ENCODE chr1:24117701-24117741
64251 chr15 43476512 43476512 1 + C T COAD 43476509 + 43476489 43476529 41 ACATGTGTTGGAGCTTGCTGCAGCGGTGCTTTGGTCACAAC ACATGTGTTGGAGCTTGCTGCAGTGGTGCTTTGGTCACAAC < 41bp 0.759649415769352 0.559043686421107 0.44534975 0.27377573 prediction 0.40121145869649 Functional Loss - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476509 chr15:43476512 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_98558 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr15:43476488-43476521
64251 chr8 73939209 73939209 1 + G A CESC 73939206 + 73939186 73939226 41 AGTAGTAGAAAGCAAAAGGACAAGAACAATAACTTCTCAAG AGTAGTAGAAAGCAAAAGGACAAAAACAATAACTTCTCAAG < 41bp 0.796426596190964 0.595822090804123 0.20020571 0.13470745 prediction 0.401209010773681 Functional Loss - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73939206 chr8:73939209 nonsynonymous SNV 0.081 1 24 hm5C_associated_SNPs_98560 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:73939171-73939222
64251 chr5 60241199 60241199 1 + G T UCEC 60241196 + 60241176 60241216 41 TACTACTACATCCCGCAGTACAAGAACTGGAGAGGTGAGGT TACTACTACATCCCGCAGTACAATAACTGGAGAGGTGAGGT < 41bp 0.700600954490185 0.315331626154085 0.22310373 0.21682382 prediction 0.40120190898037 Functional Loss - NDUFAF2 ENSG00000164182 CDS Human protein_coding chr5:60241196 chr5:60241199 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_98565 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:60241169-60241199
64251 chr10 70930990 70930990 1 + G A ESCA 70930987 + 70930967 70931007 41 TTCACCAGCGATTTGAATCTCCAGAATCACAGGCATCTGCC TTCACCAGCGATTTGAATCTCCAAAATCACAGGCATCTGCC < 41bp 0.744201093836349 0.543600707753245 0.5920828 0.13041773 prediction 0.401200772166208 Functional Loss - VPS26A ENSG00000122958 CDS Human protein_coding chr10:70930987 chr10:70930990 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_98566 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:70930940-70931000
64251 chr21 35144551 35144551 1 + A T SKCM 35144547 + 35144527 35144567 41 AGCGCAAAAGACAACTGGAACTGGAGAAGCAACTGGAAAAG AGCGCAAAAGACAACTGGAACTGGTGAAGCAACTGGAAAAG < 41bp 0.870435160274936 0.66984971709593 0.79429114 0.38725922 prediction 0.401170886358013 Functional Loss - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35144547 chr21:35144551 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_98574 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:35144535-35144556
64251 chr1 2521657 2521657 1 + G A rs536161725 2521654 + 2521634 2521674 41 CTGCACTCCCTAGTCCAGACCTGGGGACCACTGTGGGTTCC CTGCACTCCCTAGTCCAGACCTGAGGACCACTGTGGGTTCC < 41bp 0.809866236276209 0.60928104239676 0.71029156 0.34231263 prediction 0.401170387758899 Functional Loss - FAM213B ENSG00000157870 UTR3 Human protein_coding chr1:2521654 chr1:2521657 . . 0 24 hm5C_associated_SNPs_98575 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:2521636-2521666
64251 chr22 21363718 21363718 1 - C G SKCM 21363721 - 21363701 21363741 41 CAGATCTGTGCATGGGACTGCAGGGCTTCCTCATCTTCCAC CAGATCTGTGCATGGGACTGCAGCGCTTCCTCATCTTCCAC < 41bp 0.728611298633764 0.528026309884138 0.5981483 0.1471366 prediction 0.401169977499253 Functional Loss - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363721 chr22:21363718 . . 0 24 hm5C_associated_SNPs_98576 0 0 1 SLTM POSTAR2 ENCODE chr22:21363661-21363723
64251 chr14 31071311 31071311 1 + T C COAD 31071310 + 31071290 31071330 41 TAAATTACCCAGACAGTCACCTGGATCCCAGAGTAAAGATC TAAATTACCCAGACAGTCACCCGGATCCCAGAGTAAAGATC < 41bp 0.700579936435198 0.445976348465711 0.12899452 0.2718814 prediction 0.401159872870395 Functional Loss - G2E3 ENSG00000092140 CDS Human protein_coding chr14:31071310 chr14:31071311 synonymous SNV . 0 22 hm5C_associated_SNPs_98579 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:31071248-31071324
64251 chr4 3318626 3318626 1 + G A HNSC 3318623 + 3318603 3318643 41 GGCTCCATTGAGCTTCCTTCCACGAGCTCCAACCTGGAGTC GGCTCCATTGAGCTTCCTTCCACAAGCTCCAACCTGGAGTC < 41bp 0.815337060833795 0.614760427801708 0.39305562 0.34559283 prediction 0.401153266064175 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3318623 chr4:3318626 synonymous SNV . 0 24 hm5C_associated_SNPs_98582 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:3318595-3318626
64251 chr1 160321553 160321553 1 + G T OV 160321549 + 160321529 160321569 41 GCTAAAGCCTATAAATACAACTGGGACATTAAAGCCTGACG GCTAAAGCCTATAAATACAACTGGTACATTAAAGCCTGACG < 41bp 0.700573690578594 0.492041018881869 0.20861498 0.16838112 prediction 0.401147381157188 Functional Loss - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160321549 chr1:160321553 synonymous SNV . 0 25 hm5C_associated_SNPs_98584 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:160321514-160321554
64251 chr1 168165865 168165865 1 + G A UCEC 168165862 + 168165842 168165882 41 GTGCTTATCAGAATGAATGACACGAGACTTTACCATGAGGT GTGCTTATCAGAATGAATGACACAAGACTTTACCATGAGGT < 41bp 0.710416239234696 0.509842648050574 0.17810845 0.12284276 prediction 0.401147182368245 Functional Loss - TIPRL ENSG00000143155 CDS Human protein_coding chr1:168165862 chr1:168165865 synonymous SNV . 0 24 hm5C_associated_SNPs_98585 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:168165786-168165875
64251 chr3 183885740 183885740 1 + G T LUAD 183885736 + 183885716 183885756 41 ATGTGGAAGGCTTCACGGACCGGAGGGAGGCCCGCAAGTAT ATGTGGAAGGCTTCACGGACCGGATGGAGGCCCGCAAGTAT < 41bp 0.717525422435343 0.51695267918109 0.9127778 0.88765574 prediction 0.401145486508504 Functional Loss - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885736 chr3:183885740 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_98586 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:183885721-183885753
64251 chrX 103041549 103041549 1 + C T STAD 103041546 + 103041526 103041566 41 CTGCGGCAAGGGCCTGAGCGCAACGGTAACAGGGGGCCAGA CTGCGGCAAGGGCCTGAGCGCAATGGTAACAGGGGGCCAGA < 41bp 0.763707678095827 0.563137272445565 0.32262027 0.24712345 prediction 0.401140811300524 Functional Loss - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103041546 chrX:103041549 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_98588 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:103041520-103041560
64251 chr6 99283587 99283587 1 + C T READ 99283584 + 99283564 99283604 41 AGTTCGCCAAGCAGTTCAAGCAGCGGCGGATCAAACTGGGA AGTTCGCCAAGCAGTTCAAGCAGTGGCGGATCAAACTGGGA < 41bp 0.714748930902568 0.514181178764351 0.86550605 0.64667237 prediction 0.401135504276435 Functional Loss - POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283584 chr6:99283587 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_98589 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:99283583-99283613
64251 chr12 6342622 6342622 1 + G T STAD 6342618 + 6342598 6342638 41 GATATTCGCCATTGAAATAGCTGCGGCCATCTGGGGATATT GATATTCGCCATTGAAATAGCTGCTGCCATCTGGGGATATT < 41bp 0.72444214984617 0.523880320282844 0.2173962 0.06923777 prediction 0.401123659126651 Functional Loss - CD9 ENSG00000010278 CDS Human protein_coding chr12:6342618 chr12:6342622 synonymous SNV . 0 25 hm5C_associated_SNPs_98594 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr12:6342619-6342643
64251 chr1 48694826 48694826 1 + G A LUAD 48694823 + 48694803 48694843 41 GAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGTCAGG GAGGGATCCATCCAAGGTCACACAGGAGGACTGGGGTCAGG < 41bp 0.700561527094573 0.45966833782603 0.36116627 0.15501672 prediction 0.401123054189146 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48694823 chr1:48694826 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_98595 0 0 4 PPIG POSTAR2 ENCODE chr1:48694792-48694826
64251 chr20 61288286 61288286 1 + C T LUSC 61288283 + 61288263 61288303 41 GCCTGCCTCTGCCTCACCTTCGTCAGCTACTTCGGGGGCTC GCCTGCCTCTGCCTCACCTTCGTTAGCTACTTCGGGGGCTC < 41bp 0.736937308792236 0.536378314110326 0.4707311 0.26937038 prediction 0.40111798936382 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61288283 chr20:61288286 synonymous SNV . 0 24 hm5C_associated_SNPs_98597 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61288254-61288304
64251 chr5 74651260 74651260 1 + G A STAD 74651257 + 74651237 74651277 41 TGGCCCAGTTGTGCGTCTTCCACGTGCTTGTGACTCTGCAG TGGCCCAGTTGTGCGTCTTCCACATGCTTGTGACTCTGCAG < 41bp 0.700557129044105 0.458949728836896 0.42478317 0.28337926 prediction 0.401114258088209 Functional Loss - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74651257 chr5:74651260 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_98598 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:74651236-74651280
64251 chr14 51716059 51716059 1 + A C rs184982115 51716058 + 51716038 51716078 41 TTTTAGGATGAGTAGTATGTCAGCACTCTTTCAGCTATCTA TTTTAGGATGAGTAGTATGTCCGCACTCTTTCAGCTATCTA < 41bp 0.700555601345184 0.452796088224877 0.061507583 0.023248851 prediction 0.401111202690368 Functional Loss - TMX1 ENSG00000139921 CDS Human protein_coding chr14:51716058 chr14:51716059 synonymous SNV . 0 22 hm5C_associated_SNPs_98599 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:51716040-51716098
64251 chr22 42205909 42205909 1 + C T SARC 42205906 + 42205886 42205926 41 AGAAGATGTTTGAGGTGAAGCGGCGGGAGCAGCTGTTGGCA AGAAGATGTTTGAGGTGAAGCGGTGGGAGCAGCTGTTGGCA < 41bp 0.735020736051817 0.534469077186002 0.8995554 0.8960078 prediction 0.401103317731631 Functional Loss - CCDC134 ENSG00000100147 CDS Human protein_coding chr22:42205906 chr22:42205909 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_98603 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:42205905-42205933
64251 chr10 25313730 25313730 1 + G A GBM 25313727 + 25313707 25313747 41 TATGCCAAAATGATGGGAATCCCGATTCGAAAATTTATCTG TATGCCAAAATGATGGGAATCCCAATTCGAAAATTTATCTG < 41bp 0.754477425530099 0.553928733588025 0.04801032 0.14943376 prediction 0.401097383884146 Functional Loss - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25313727 chr10:25313730 synonymous SNV . 0 24 hm5C_associated_SNPs_98605 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:25313718-25313747
64251 chr16 8738510 8738510 1 + G T COAD 8738507 + 8738487 8738527 41 CTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGGTGGA CTGGAGCAGCTCGCAGATGGCAATCTGCGCTTCGTGGTGGA < 41bp 0.700547882250392 0.296214693813578 0.31784138 0.2673406 prediction 0.401095764500784 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738507 chr16:8738510 nonsynonymous SNV 0.077 0 24 hm5C_associated_SNPs_98608 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:8738507-8738532
64251 chr19 53089639 53089639 1 + G A rs329933 53089636 + 53089616 53089656 41 AAATGTATATGTAGACTGAACGCGGTGGCTCATGCCTGTCA AAATGTATATGTAGACTGAACGCAGTGGCTCATGCCTGTCA < 41bp 0.700547202466205 0.486777086078143 0.74859077 0.21692553 prediction 0.40109440493241 Functional Loss - ZNF701 ENSG00000167562 UTR3 Human protein_coding chr19:53089636 chr19:53089639 . . 0 24 hm5C_associated_SNPs_98609 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:53089628-53089649
64251 chr8 17126456 17126456 1 + C T UCEC 17126453 + 17126433 17126473 41 AGTTTTAGCTCCTACTTCAACAGCATTTCCTTAGTAAGTAT AGTTTTAGCTCCTACTTCAACAGTATTTCCTTAGTAAGTAT < 41bp 0.731152215529733 0.530608275242559 0.17858756 0.15817711 prediction 0.401087880574348 Functional Loss - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17126453 chr8:17126456 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_98615 0 0 2 GRWD1 POSTAR2 ENCODE chr8:17126414-17126466
64251 chr7 65579853 65579853 1 + G C LUSC 65579852 + 65579832 65579872 41 CCGGCGAGCACCTTGGCGCGCGGAGCTGGCACCTTGGCGCT CCGGCGAGCACCTTGGCGCGCCGAGCTGGCACCTTGGCGCT < 41bp 0.892482533444842 0.691938935172102 0.91266274 0.72500044 prediction 0.401087196545481 Functional Loss - CRCP ENSG00000241258 CDS Human protein_coding chr7:65579852 chr7:65579853 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_98616 0 0 1 DDX3X POSTAR2 ENCODE chr7:65579832-65579903
64251 chr17 27061855 27061855 1 + C T COAD 27061852 + 27061832 27061872 41 TGCTGGAGGAGGAGACCATCCTGCACTTCTTCGTGCAGATC TGCTGGAGGAGGAGACCATCCTGTACTTCTTCGTGCAGATC < 41bp 0.792377689962272 0.59183468919305 0.18143943 0.09174678 prediction 0.401086001538444 Functional Loss - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061852 chr17:27061855 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_98617 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:27061840-27061867
64251 chr11 62381260 62381260 1 + C T UCEC 62381257 + 62381237 62381277 41 CTGCAACTGAGGTACCACTGCTGCGGGCGCCACGGGTACAA CTGCAACTGAGGTACCACTGCTGTGGGCGCCACGGGTACAA < 41bp 0.748161323881724 0.54762046909869 0.48277095 0.47704944 prediction 0.401081709566067 Functional Loss - ROM1 ENSG00000149489 CDS Human protein_coding chr11:62381257 chr11:62381260 synonymous SNV . 0 24 hm5C_associated_SNPs_98620 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:62381249-62381278
64251 chr1 32646088 32646088 1 + A C rs202084683 32646084 + 32646064 32646104 41 GCAGTAGAAGCAGAAGGTCCCGGCAGCAGCCAGGCTCCTCG GCAGTAGAAGCAGAAGGTCCCGGCCGCAGCCAGGCTCCTCG < 41bp 0.938490500718389 0.737951273551219 0.89150435 0.82685494 prediction 0.401078454334341 Functional Loss - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32646084 chr1:32646088 nonsynonymous SNV 0.042 0 25 hm5C_associated_SNPs_98622 0 0 12 DDX24 POSTAR2 ENCODE chr1:32645998-32646114
64251 chr14 39650888 39650888 1 + G T STAD 39650886 + 39650866 39650906 41 TCGGAAGAGAAGGGATACTTCAGGACTAGAAAGAAGTCACA TCGGAAGAGAAGGGATACTTCATGACTAGAAAGAAGTCACA < 41bp 0.911450161745577 0.710911309337101 0.43319458 0.068416506 prediction 0.401077704816954 Functional Loss - PNN ENSG00000100941 CDS Human protein_coding chr14:39650886 chr14:39650888 stopgain 1.000 1 23 hm5C_associated_SNPs_98624 0 0 33 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr9 80851350 80851350 1 + G C rs10867166 80851349 + 80851329 80851369 41 CCTGTGCGCGCTGCAGAACTCGGTGCCGCTGCCCGCCGTGC CCTGTGCGCGCTGCAGAACTCCGTGCCGCTGCCCGCCGTGC < 41bp 0.87122938096102 0.670692357191248 0.927979 0.8258604 prediction 0.401074047539545 Functional Loss - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80851349 chr9:80851350 synonymous SNV . 0 22 hm5C_associated_SNPs_98626 0 0 1 DDX3X POSTAR2 ENCODE chr9:80851322-80851389
64251 chr8 27516353 27516353 1 + G T UCEC 27516350 + 27516330 27516370 41 GATGTCAAGGCTGCAGTGCACCAGATCAACTTCACCGTGGG GATGTCAAGGCTGCAGTGCACCATATCAACTTCACCGTGGG < 41bp 0.700531231560079 0.294349938266108 0.501941 0.13342494 prediction 0.401062463120159 Functional Loss - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516350 chr8:27516353 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_98633 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:27516351-27516389
64251 chr12 121659784 121659784 1 + C T STAD 121659782 + 121659762 121659802 41 ACCAGACACAGGGCCTGTGCCCCGAGGTAGGAGGCCCCCGG ACCAGACACAGGGCCTGTGCCCTGAGGTAGGAGGCCCCCGG < 41bp 0.862861809620358 0.662337948187123 0.15433326 0.14987448 prediction 0.401047722866469 Functional Loss - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659782 chr12:121659784 synonymous SNV . 0 23 hm5C_associated_SNPs_98641 0 0 4 GRWD1 POSTAR2 ENCODE chr12:121659714-121659807
64251 chr11 381866 381866 1 + C T rs563084177 381864 + 381844 381884 41 GGCTGGGCTTTGAGCTCGGTCCCGAGAGACCCGGCAGGGCT GGCTGGGCTTTGAGCTCGGTCCTGAGAGACCCGGCAGGGCT < 41bp 0.700514755051056 0.479961043745747 0.35775244 0.40666983 prediction 0.401029510102113 Functional Loss - B4GALNT4 ENSG00000182272 UTR3 Human protein_coding chr11:381864 chr11:381866 . . 0 23 hm5C_associated_SNPs_98648 0 0 1 DDX3X POSTAR2 ENCODE chr11:381860-381877
64251 chr17 19283165 19283165 1 + G A LUSC 19283162 + 19283142 19283182 41 ACCAATGCCAAGCGGACCCTCAGGGAGCTGAAGATCCTCAA ACCAATGCCAAGCGGACCCTCAGAGAGCTGAAGATCCTCAA < 41bp 0.70050898086519 0.462633184066504 0.8884729 0.4798612 prediction 0.401017961730381 Functional Loss - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19283162 chr17:19283165 synonymous SNV . 0 24 hm5C_associated_SNPs_98649 0 0 1 TBRG4 POSTAR2 ENCODE chr17:19283154-19283187
64251 chr16 8722640 8722640 1 + G T COAD 8722638 + 8722618 8722658 41 CCAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGCAGTC CCAAGACTCTTGGACAGATTCATGAGCCAAGGGTGGCAGTC < 41bp 0.922335262328306 0.721827153661694 0.93190086 0.21288055 prediction 0.401016217333223 Functional Loss - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722638 chr16:8722640 stopgain 0.380 0 23 hm5C_associated_SNPs_98652 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:8722622-8722648
64251 chr11 44129448 44129448 1 + C T rs535164200 44129445 + 44129425 44129465 41 GACTGGAATGTAGAGAAGCGCAGCATCCGTGATGTGCCGGT GACTGGAATGTAGAGAAGCGCAGTATCCGTGATGTGCCGGT < 41bp 0.76053523498244 0.560027692733628 0.16119218 0.19076872 prediction 0.401015084497625 Functional Loss - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44129445 chr11:44129448 synonymous SNV . 0 24 hm5C_associated_SNPs_98653 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr11:44129410-44129455
64251 chr12 14633975 14633975 1 + C T BLCA 14633973 + 14633953 14633993 41 TGTAACACATCGTCCAGTAACTCAGGTGACCACAAGACTCC TGTAACACATCGTCCAGTAACTTAGGTGACCACAAGACTCC < 41bp 0.700505831152217 0.406889625067506 0.042459965 0.063367605 prediction 0.401011662304434 Functional Loss - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14633973 chr12:14633975 stopgain 1.000 1 23 hm5C_associated_SNPs_98654 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:14633950-14633977
64251 chr12 51639878 51639878 1 + G A rs182062015 51639875 + 51639855 51639895 41 ATCAAGATCACGACCGAGAGCAGGGTGAGGAAGACAACGGT ATCAAGATCACGACCGAGAGCAGAGTGAGGAAGACAACGGT < 41bp 0.802391580906165 0.601889903379756 0.87616646 0.53381324 prediction 0.401003355052817 Functional Loss - DAZAP2;SMAGP ENSG00000170545;ENSG00000183283 CDS Human other chr12:51639875 chr12:51639878 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_98658 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:51639858-51639885
64251 chr19 11144181 11144181 1 + G T UCEC 11144178 + 11144158 11144198 41 CTGCAGGCCATCCTGGAGCACGAGGAGCAGGATGAGGTGAG CTGCAGGCCATCCTGGAGCACGATGAGCAGGATGAGGTGAG < 41bp 0.700495409816141 0.328538657926122 0.89685166 0.33368874 prediction 0.400990819632281 Functional Loss - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11144178 chr19:11144181 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_98666 0 0 3 FMR1 POSTAR2 ENCODE chr19:11144171-11144192
64251 chr2 66665001 66665001 1 + C T BLCA 66664998 + 66664978 66665018 41 ACGGGCCTCCTCTGCACTCGCATCAGTACCCGCACACAGCT ACGGGCCTCCTCTGCACTCGCATTAGTACCCGCACACAGCT < 41bp 0.700494123484095 0.491290831878277 0.09080121 0.108570814 prediction 0.40098824696819 Functional Loss - MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66664998 chr2:66665001 stopgain 1.000 1 24 hm5C_associated_SNPs_98667 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:66664972-66665009
64251 chr16 56691995 56691995 1 + G T rs76144808 56691991 + 56691971 56692011 41 ATGGACCCCAACTGCTCCTGCGCCGCTGGTAAGGAACGCCG ATGGACCCCAACTGCTCCTGCGCCTCTGGTAAGGAACGCCG < 41bp 0.751290721153429 0.550800648869313 0.17829257 0.26212484 prediction 0.400980144568233 Functional Loss - MT1F ENSG00000198417 CDS Human protein_coding chr16:56691991 chr16:56691995 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_98670 0 0 4 DDX3X POSTAR2 ENCODE chr16:56691897-56692002
64251 chr2 113286509 113286509 1 + C T rs73955228 113286507 + 113286487 113286527 41 AAAGATGAGATGGAAGAAGGCACGTGAGCAGAGGAGGCAGC AAAGATGAGATGGAAGAAGGCATGTGAGCAGAGGAGGCAGC < 41bp 0.700489885804329 0.464815984911386 0.19319785 0.17270717 prediction 0.400979771608658 Functional Loss - TTL ENSG00000114999 UTR3 Human protein_coding chr2:113286507 chr2:113286509 . . 0 23 hm5C_associated_SNPs_98671 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:113286483-113286514
64251 chr2 113286510 113286510 1 + G A rs75064979 113286507 + 113286487 113286527 41 AAAGATGAGATGGAAGAAGGCACGTGAGCAGAGGAGGCAGC AAAGATGAGATGGAAGAAGGCACATGAGCAGAGGAGGCAGC < 41bp 0.700489885804329 0.465821015059197 0.19319785 0.21978664 prediction 0.400979771608658 Functional Loss - TTL ENSG00000114999 UTR3 Human protein_coding chr2:113286507 chr2:113286510 . . 0 24 hm5C_associated_SNPs_98672 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:113286483-113286514
64251 chr9 101589096 101589096 1 + G A ACC 101589093 + 101589073 101589113 41 TGCCCAAGGTGCGCCTGATCCGCGCCAACAAGAGAGAGGGC TGCCCAAGGTGCGCCTGATCCGCACCAACAAGAGAGAGGGC < 41bp 0.832969815291388 0.632480903341086 0.5958634 0.14844152 prediction 0.400977823900604 Functional Loss - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101589093 chr9:101589096 nonsynonymous SNV 0.149 3 24 hm5C_associated_SNPs_98673 0 0 1 DDX24 POSTAR2 ENCODE chr9:101589031-101589106
64251 chrX 100646534 100646534 1 + G T UCEC 100646530 + 100646510 100646550 41 GTGACACAGTACAAGAAGGGCAAGGATTCTCTGTACGCCCA GTGACACAGTACAAGAAGGGCAAGTATTCTCTGTACGCCCA < 41bp 0.707913073560459 0.507427339083569 0.52047914 0.17733681 prediction 0.400971468953779 Functional Loss - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646530 chrX:100646534 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_98675 0 0 13 CNBP POSTAR2 GSE76193,GSM1976310 chrX:100646520-100646540
64251 chr19 55493627 55493627 1 + G T LUAD 55493623 + 55493603 55493643 41 CAAAGAGGTCCAGGTTATGGCTGAGAGATACAAGATGCTGA CAAAGAGGTCCAGGTTATGGCTGATAGATACAAGATGCTGA < 41bp 0.700477319682896 0.493285612941964 0.12155676 0.05318767 prediction 0.400954639365791 Functional Loss - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55493623 chr19:55493627 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_98683 0 0 1 DDX24 POSTAR2 ENCODE chr19:55493540-55493640
64251 chr16 30429616 30429616 1 + G A rs571216265 30429613 + 30429593 30429633 41 TATATTTGCGCCGGCTGCGGCAGGGACTTCAAGCTGCCCCC TATATTTGCGCCGGCTGCGGCAGAGACTTCAAGCTGCCCCC < 41bp 0.831527166456328 0.631050442788271 0.91560036 0.8695047 prediction 0.400953447336112 Functional Loss - ZNF771 ENSG00000179965 CDS Human protein_coding chr16:30429613 chr16:30429616 synonymous SNV . 0 24 hm5C_associated_SNPs_98686 0 0 1 PUM2 POSTAR2 ENCODE chr16:30429562-30429677
64251 chr12 34175705 34175705 1 + G T LUAD 34175701 + 34175681 34175721 41 TGAGGGCCATTTCTCCCTTTCCCAGGTGGGGTCCCCAACCT TGAGGGCCATTTCTCCCTTTCCCATGTGGGGTCCCCAACCT < 41bp 0.728301345902071 0.527825296146425 0.3950526 0.17940566 prediction 0.400952099511294 Functional Loss - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175701 chr12:34175705 nonsynonymous SNV 0.888 1 25 hm5C_associated_SNPs_98687 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:34175690-34175716
64251 chr11 66272197 66272197 1 + C T HNSC 66272194 + 66272174 66272214 41 CCCTCAGGGACACGGTGCTGCTGCGTAAGGAATCTCGGAAG CCCTCAGGGACACGGTGCTGCTGTGTAAGGAATCTCGGAAG < 41bp 0.700474771342981 0.482413961303481 0.20313177 0.11352259 prediction 0.400949542685962 Functional Loss - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66272194 chr11:66272197 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_98689 0 0 1 SND1 POSTAR2 ENCODE chr11:66272105-66272197
64251 chr1 16096992 16096992 1 + G A UCEC 16096989 + 16096969 16097009 41 CAGTACCATGCCCAGTGCTTCACGTGCCGCACCTGCCGCCG CAGTACCATGCCCAGTGCTTCACATGCCGCACCTGCCGCCG < 41bp 0.700474176297369 0.443411397019607 0.3180701 0.074041754 prediction 0.400948352594737 Functional Loss - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16096989 chr1:16096992 synonymous SNV . 0 24 hm5C_associated_SNPs_98690 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:16096985-16097009
64251 chr2 46986916 46986916 1 + C T BLCA 46986914 + 46986894 46986934 41 GCGCAAGAGGACTACCTCTTCTCTGTGAGCTTCCGCCGCTA GCGCAAGAGGACTACCTCTTCTTTGTGAGCTTCCGCCGCTA < 41bp 0.700473785719252 0.415132174048884 0.5246547 0.49169016 prediction 0.400947571438503 Functional Loss - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46986914 chr2:46986916 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_98691 0 0 2 RBM15 POSTAR2 ENCODE chr2:46986878-46986957
64251 chr2 176981654 176981654 1 + C T UCEC 176981651 + 176981631 176981671 41 AGTGACAGTTTTTATTCCAGCAGCGCCAGCATGTACATGCC AGTGACAGTTTTTATTCCAGCAGTGCCAGCATGTACATGCC < 41bp 0.710436860555661 0.509963297250568 0.14116639 0.11614731 prediction 0.400947126610186 Functional Loss - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981651 chr2:176981654 synonymous SNV . 0 24 hm5C_associated_SNPs_98692 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:176981557-176981671
64251 chr11 64940166 64940166 1 + G T UCEC 64940162 + 64940142 64940182 41 CTGCTCCTCCCAGGTCATGGCAAAGGAGCCATTCCACTGGG CTGCTCCTCCCAGGTCATGGCAAATGAGCCATTCCACTGGG < 41bp 0.735716128663451 0.535244152274603 0.41630787 0.451023 prediction 0.400943952777696 Functional Loss - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64940162 chr11:64940166 nonsynonymous SNV 0.833 1 25 hm5C_associated_SNPs_98694 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:64940097-64940167
64251 chr15 41105975 41105975 1 + G A STAD 41105972 + 41105952 41105992 41 CATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACCCC CATCCCTGCAGAGCAGGCTTCTCAACCCTGGACGCAACCCC < 41bp 0.830963146371715 0.630492599793709 0.46839112 0.19979593 prediction 0.400941093156012 Functional Loss - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41105972 chr15:41105975 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_98696 0 0 5 BUD13 POSTAR2 ENCODE chr15:41105921-41106013
64251 chr22 38074571 38074571 1 + C T COAD 38074568 + 38074548 38074588 41 TTCAACGCCCACGGCGACGCCAACACCATCGTGTGCAACAG TTCAACGCCCACGGCGACGCCAATACCATCGTGTGCAACAG < 41bp 0.784471153738643 0.584002142368355 0.09484011 0.08128601 prediction 0.400938022740575 Functional Loss - LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38074568 chr22:38074571 synonymous SNV . 0 24 hm5C_associated_SNPs_98699 0 0 1 YBX3 POSTAR2 ENCODE chr22:38074569-38074578
64251 chr4 26417170 26417170 1 + G A UCEC 26417167 + 26417147 26417187 41 AAAAAAAAGAACAAATGGAACGCGATGGTTGTTCTGAACAA AAAAAAAAGAACAAATGGAACGCAATGGTTGTTCTGAACAA < 41bp 0.786748523675335 0.586285294578452 0.4245299 0.13855067 prediction 0.400926458193767 Functional Loss - RBPJ ENSG00000168214 CDS Human protein_coding chr4:26417167 chr4:26417170 nonsynonymous SNV 0.978 2 24 hm5C_associated_SNPs_98702 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:26417160-26417194
64251 chr14 77787681 77787681 1 + G C rs77759067 77787680 + 77787660 77787700 41 CGCTCTGCGCCTGCGTGCTGCGCGCTGCCCGCTGGGGCTCG CGCTCTGCGCCTGCGTGCTGCCCGCTGCCCGCTGGGGCTCG < 41bp 0.700462674798182 0.383493747521496 0.35655588 0.16668516 prediction 0.400925349596364 Functional Loss - GSTZ1 ENSG00000100577 intronic Human protein_coding chr14:77787680 chr14:77787681 . . 0 22 hm5C_associated_SNPs_98704 0 0 1 XPO5 POSTAR2 ENCODE chr14:77787638-77787704
64251 chr1 182856426 182856426 1 + G C KIRP 182856422 + 182856402 182856442 41 GGAGGCTATAGAGGAGTTTCCCGAGGTGGCTTTAGAGGCAA GGAGGCTATAGAGGAGTTTCCCGACGTGGCTTTAGAGGCAA < 41bp 0.700456721115923 0.407845038252498 0.90839255 0.7482657 prediction 0.400913442231847 Functional Loss - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182856422 chr1:182856426 nonsynonymous SNV 0.151 1 25 hm5C_associated_SNPs_98710 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:182856400-182856451
64251 chr12 67703753 67703753 1 + C T LUSC 67703750 + 67703730 67703770 41 AGCCTTGGTCACATTTAATTCAGCAGCACATAACAAGCCAT AGCCTTGGTCACATTTAATTCAGTAGCACATAACAAGCCAT < 41bp 0.70045049072888 0.47858798910543 0.50667703 0.41246626 prediction 0.40090098145776 Functional Loss - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67703750 chr12:67703753 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_98715 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chr12:67703719-67703755
64251 chr19 48258075 48258075 1 + C T rs201876600 48258073 + 48258053 48258093 41 GGGGATGCCGAGGTCTGTCCCACGCCCGCCCGCCTGGCCAC GGGGATGCCGAGGTCTGTCCCATGCCCGCCCGCCTGGCCAC < 41bp 0.827855714588264 0.62740920445825 0.32344785 0.35145396 prediction 0.400893020260028 Functional Loss - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48258073 chr19:48258075 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_98722 0 0 14 RTCB POSTAR2 GSE38201,GSM936508 chr19:48258066-48258095
64251 chr19 16980532 16980532 1 + G A HNSC 16980529 + 16980509 16980549 41 ATGAGGACCGGGACAGCCCCCAGGGGCAGACCACAGACCCC ATGAGGACCGGGACAGCCCCCAGAGGCAGACCACAGACCCC < 41bp 0.83387415634244 0.633431226362414 0.9138948 0.86054236 prediction 0.400885859960054 Functional Loss - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16980529 chr19:16980532 nonsynonymous SNV 0.040 0 24 hm5C_associated_SNPs_98728 0 0 3 EIF3H POSTAR2 ENCODE chr19:16980460-16980548
64251 chr17 7311921 7311921 1 + C T UCEC 7311919 + 7311899 7311939 41 AACCTGCACGGGGCGCTGCCCGCCATCATGCTGCCTGTGTG AACCTGCACGGGGCGCTGCCCGTCATCATGCTGCCTGTGTG < 41bp 0.843170178364521 0.642730085109599 0.12811673 0.0999797 prediction 0.400880186509844 Functional Loss - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7311919 chr17:7311921 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_98729 0 0 2 GRWD1 POSTAR2 ENCODE chr17:7311920-7312017
64251 chr15 57809077 57809077 1 + C T rs562562448 57809074 + 57809054 57809094 41 TGCAGGAGGAGAATGAGAAGCTGCAGGGAAGAAGCGAAGAG TGCAGGAGGAGAATGAGAAGCTGTAGGGAAGAAGCGAAGAG < 41bp 0.700439225380788 0.46255069817764 0.5260025 0.33878052 prediction 0.400878450761575 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57809074 chr15:57809077 stopgain 0.899 0 24 hm5C_associated_SNPs_98730 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:57809059-57809092
64251 chr15 57809078 57809078 1 + A C rs531644842 57809074 + 57809054 57809094 41 TGCAGGAGGAGAATGAGAAGCTGCAGGGAAGAAGCGAAGAG TGCAGGAGGAGAATGAGAAGCTGCCGGGAAGAAGCGAAGAG < 41bp 0.700439225380788 0.26940451136652 0.5260025 0.32712182 prediction 0.400878450761575 Functional Loss - CGNL1 ENSG00000128849 CDS Human protein_coding chr15:57809074 chr15:57809078 nonsynonymous SNV 0.872 1 25 hm5C_associated_SNPs_98731 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:57809059-57809092
64251 chr9 96407921 96407921 1 + G C LUSC 96407920 + 96407900 96407940 41 CTTCCCTGCAGTGCTGAAGACGTGGTGGCCCGTGTGCCAGG CTTCCCTGCAGTGCTGAAGACCTGGTGGCCCGTGTGCCAGG < 41bp 0.700437602341228 0.367854004194956 0.5061787 0.14062849 prediction 0.400875204682456 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96407920 chr9:96407921 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_98733 0 0 1 FMR1 POSTAR2 ENCODE chr9:96407909-96408017
64251 chr15 44086188 44086188 1 + A C rs565283773 44086187 + 44086167 44086207 41 GTGAGGGGGTTACCCCTTCCCAGTGTTTTTTATTCCTGTGG GTGAGGGGGTTACCCCTTCCCCGTGTTTTTTATTCCTGTGG < 41bp 0.7004353557947 0.447896272051505 0.38208872 0.39270157 prediction 0.400870711589399 Functional Loss - SERF2-C15ORF63 ENSG00000140264 UTR3 Human protein_coding chr15:44086187 chr15:44086188 . . 0 22 hm5C_associated_SNPs_98738 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:44085948-44086197
64251 chr8 91013777 91013777 1 + C T BLCA 91013775 + 91013755 91013795 41 GGTCCCGGCTGCCCTGTGGCCTCGCTCCTCGGAGGGTAAGG GGTCCCGGCTGCCCTGTGGCCTTGCTCCTCGGAGGGTAAGG < 41bp 0.700435135153397 0.460318590357562 0.043330938 0.044688582 prediction 0.400870270306795 Functional Loss - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91013775 chr8:91013777 synonymous SNV . 0 23 hm5C_associated_SNPs_98739 0 0 5 DDX3X POSTAR2 ENCODE chr8:91013743-91013789
64251 chr19 34263185 34263185 1 + C T UCEC 34263182 + 34263162 34263202 41 AAGCGGGTGATGCAGGAGGCCTGCGCCAAGTACCGGGCGAG AAGCGGGTGATGCAGGAGGCCTGTGCCAAGTACCGGGCGAG < 41bp 0.720163105527291 0.519729063348336 0.73482454 0.6258632 prediction 0.400868084357911 Functional Loss - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34263182 chr19:34263185 synonymous SNV . 0 24 hm5C_associated_SNPs_98742 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34263128-34263188
64251 chr2 219458966 219458966 1 + C T STAD 219458963 + 219458943 219458983 41 AACCTGCAAGAGGGCCAGGTCACCGATCCCCGGGGTATCCC AACCTGCAAGAGGGCCAGGTCACTGATCCCCGGGGTATCCC < 41bp 0.78387281039657 0.583440091594336 0.19366619 0.25961417 prediction 0.40086543760447 Functional Loss - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219458963 chr2:219458966 synonymous SNV . 0 24 hm5C_associated_SNPs_98744 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:219458939-219458994
64251 chr10 45486472 45486472 1 + G A SKCM 45486469 + 45486449 45486489 41 GGGCCATGTGAGAAGATCGCCAGGATCTTCCTGATGGAAGC GGGCCATGTGAGAAGATCGCCAGAATCTTCCTGATGGAAGC < 41bp 0.814134027978212 0.613701635438058 0.7670604 0.7640116 prediction 0.400864785080306 Functional Loss - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486469 chr10:45486472 synonymous SNV . 0 24 hm5C_associated_SNPs_98746 0 0 3 BUD13 POSTAR2 ENCODE chr10:45486419-45486524
64251 chr7 99229650 99229650 1 + C T rs142604702 99229648 + 99229628 99229668 41 CAGGTGGGGACTGGGGAGGCCTCGGGGGGCTGCTTGTCATT CAGGTGGGGACTGGGGAGGCCTTGGGGGGCTGCTTGTCATT < 41bp 0.728181244467251 0.527750902671661 0.9189863 0.871966 prediction 0.400860683591179 Functional Loss - ZSCAN25 ENSG00000197037 UTR3 Human protein_coding chr7:99229648 chr7:99229650 . . 0 23 hm5C_associated_SNPs_98747 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:99229624-99229660
64251 chr1 235597525 235597525 1 + C T rs75832955 235597522 + 235597502 235597542 41 CCGAGTTTCTCTTCCAGGTGCTGCGGTGTGTCGCGGGGTGC CCGAGTTTCTCTTCCAGGTGCTGTGGTGTGTCGCGGGGTGC < 41bp 0.700426273734986 0.475221067323614 0.8740455 0.8730532 prediction 0.400852547469973 Functional Loss - TBCE ENSG00000116957 CDS Human protein_coding chr1:235597522 chr1:235597525 nonsynonymous SNV 0.137 0 24 hm5C_associated_SNPs_98750 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:235597520-235597540
64251 chr14 100406863 100406863 1 + C T rs11850649 100406861 + 100406841 100406881 41 ATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATT ATGATAATGAGGTACTGAACCATGATGGCTGTTGAGGAATT < 41bp 0.700423748480191 0.428947687200314 0.21261686 0.18031555 prediction 0.400847496960382 Functional Loss - EML1 ENSG00000066629 UTR3 Human protein_coding chr14:100406861 chr14:100406863 . . 0 23 hm5C_associated_SNPs_98752 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr14:100406841-100406870
64251 chr4 3318863 3318863 1 + C T PRAD 3318860 + 3318840 3318880 41 GTTACCATGCAGACGAATGACGACGGGAGCCTGGCCCAGGA GTTACCATGCAGACGAATGACGATGGGAGCCTGGCCCAGGA < 41bp 0.725602212808245 0.525183624081085 0.8934318 0.8760659 prediction 0.400837177454321 Functional Loss - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3318860 chr4:3318863 synonymous SNV . 0 24 hm5C_associated_SNPs_98754 0 0 2 EIF3H POSTAR2 ENCODE chr4:3318834-3318925
64251 chr7 106829866 106829866 1 + G A UCEC 106829863 + 106829843 106829883 41 TACTTACCGTAGAGTGTAAGCTGGACCACCCTTTCTATGTT TACTTACCGTAGAGTGTAAGCTGAACCACCCTTTCTATGTT < 41bp 0.802637961436494 0.602219848447129 0.15044463 0.1681442 prediction 0.400836225978729 Functional Loss - HBP1 ENSG00000105856 CDS Human protein_coding chr7:106829863 chr7:106829866 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_98755 0 0 2 RPS3 POSTAR2 ENCODE chr7:106829834-106829885
64251 chr15 40751724 40751724 1 + C T READ 40751721 + 40751701 40751741 41 TTTCCCCACACCTCAGCTGTCGCCGCTGCCGATGCCTGGCA TTTCCCCACACCTCAGCTGTCGCTGCTGCCGATGCCTGGCA < 41bp 0.700416570635639 0.485092979688917 0.7138094 0.33779335 prediction 0.400833141271277 Functional Loss - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751721 chr15:40751724 nonsynonymous SNV 0.519 1 24 hm5C_associated_SNPs_98757 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:40751689-40751737
64251 chr2 120194498 120194498 1 + C T COAD 120194495 + 120194475 120194515 41 CTTTGGGCCAAAGGCAGCCCCGCCGGTCCTTCTTTGAATCC CTTTGGGCCAAAGGCAGCCCCGCTGGTCCTTCTTTGAATCC < 41bp 0.735553340475873 0.535138482924772 0.05178079 0.12183267 prediction 0.400829715102202 Functional Loss - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194495 chr2:120194498 nonsynonymous SNV 0.640 1 24 hm5C_associated_SNPs_98758 0 0 3 DDX3X POSTAR2 ENCODE chr2:120194469-120194504
64251 chr19 1924189 1924189 1 + C T rs75734024 1924186 + 1924166 1924206 41 CACGGGCACTTGGCGGAACCCACCGTCGAGGGAGGCCCAGT CACGGGCACTTGGCGGAACCCACTGTCGAGGGAGGCCCAGT < 41bp 0.764818703120471 0.564404755705707 0.14784548 0.110423625 prediction 0.400827894829528 Functional Loss - SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1924186 chr19:1924189 nonsynonymous SNV 0.078 0 24 hm5C_associated_SNPs_98759 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1924119-1924196
64251 chr10 104158595 104158595 1 + C T UCEC 104158592 + 104158572 104158612 41 GGGTGGAGGCTCTGGGGGTGCAGCCGGGGGCTACGGAGGAG GGGTGGAGGCTCTGGGGGTGCAGTCGGGGGCTACGGAGGAG < 41bp 0.700413083538702 0.497282186569402 0.8976807 0.82097673 prediction 0.400826167077404 Functional Loss - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104158592 chr10:104158595 nonsynonymous SNV 0.955 1 24 hm5C_associated_SNPs_98760 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:104158580-104158606
64251 chr2 228195496 228195496 1 + G A LUAD 228195493 + 228195473 228195513 41 CGCCAAACGCTGACCTGGAACAAGGATTCCAAGAAGGAGTT CGCCAAACGCTGACCTGGAACAAAGATTCCAAGAAGGAGTT < 41bp 0.803157648685789 0.602747586262643 0.3290987 0.16037595 prediction 0.400820124846291 Functional Loss - MFF;MFF ENSG00000168958 CDS Human protein_coding chr2:228195493 chr2:228195496 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_98763 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:228195461-228195497
64251 chr8 81399415 81399415 1 + G A UCEC 81399412 + 81399392 81399432 41 CGGAAAGGAACCGTCGGACTCTGGCCTTCCGAGGCGGCGGC CGGAAAGGAACCGTCGGACTCTGACCTTCCGAGGCGGCGGC < 41bp 0.813535342173563 0.613127199189945 0.28005552 0.17307293 prediction 0.400816285967235 Functional Loss - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399412 chr8:81399415 nonsynonymous SNV 0.995 3 24 hm5C_associated_SNPs_98768 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:81399394-81399422
64251 chrX 135586542 135586542 1 + G A LUAD 135586539 + 135586519 135586559 41 TCAGGCAGTTGGATTGGAGACCTGAGAGGCGAGCCGGACCA TCAGGCAGTTGGATTGGAGACCTAAGAGGCGAGCCGGACCA < 41bp 0.700405816547441 0.453267419740399 0.24644414 0.18953279 prediction 0.400811633094881 Functional Loss - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135586539 chrX:135586542 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98772 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:135586508-135586558
64251 chr2 219610450 219610450 1 + G T LUSC 219610446 + 219610426 219610466 41 CCTGGGAACAGAGGAAGTTGCTCCGATGGAAGATGAGCACA CCTGGGAACAGAGGAAGTTGCTCCTATGGAAGATGAGCACA < 41bp 0.75036394337666 0.549958352037955 0.30060923 0.24162972 prediction 0.400811182677411 Functional Loss - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219610446 chr2:219610450 nonsynonymous SNV 0.818 1 25 hm5C_associated_SNPs_98773 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:219610449-219610450
64251 chr22 46664478 46664478 1 + C T LUSC 46664476 + 46664456 46664496 41 GCCTGCAAGCTGTTCGATGCCACGCTGACCCAGGTATGCCT GCCTGCAAGCTGTTCGATGCCATGCTGACCCAGGTATGCCT < 41bp 0.700404279386736 0.430124222085234 0.35951373 0.32090998 prediction 0.400808558773472 Functional Loss - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46664476 chr22:46664478 nonsynonymous SNV 0.861 2 23 hm5C_associated_SNPs_98775 0 0 1 NOL12 POSTAR2 ENCODE chr22:46664416-46664479
64251 chr9 133577675 133577675 1 + G A UCEC 133577672 + 133577652 133577692 41 TGAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCAAACC TGAGCACAAAGAAGAGGAAGCAGAGGGCTTCATTGCAAACC < 41bp 0.721083622051882 0.520682738427751 0.9236627 0.8468725 prediction 0.400801767248261 Functional Loss - EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133577672 chr9:133577675 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_98780 0 0 8 GRWD1 POSTAR2 ENCODE chr9:133577582-133577695
64251 chr3 111664163 111664163 1 + G T rs144826196 111664161 + 111664141 111664181 41 AAAGAAATACTCCAGCCTCTCTGGGGGGAAAGGGTTTCCCG AAAGAAATACTCCAGCCTCTCTTGGGGGAAAGGGTTTCCCG < 41bp 0.700400828584482 0.3575894998234 0.90776575 0.17054865 prediction 0.400801657168964 Functional Loss - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111664161 chr3:111664163 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_98781 0 0 1 U2AF2 POSTAR2 ENCODE chr3:111664090-111664193
64251 chr3 111664164 111664164 1 + G A SKCM 111664161 + 111664141 111664181 41 AAAGAAATACTCCAGCCTCTCTGGGGGGAAAGGGTTTCCCG AAAGAAATACTCCAGCCTCTCTGAGGGGAAAGGGTTTCCCG < 41bp 0.700400828584482 0.466109139882965 0.90776575 0.33446014 prediction 0.400801657168964 Functional Loss - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111664161 chr3:111664164 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_98782 0 0 1 U2AF2 POSTAR2 ENCODE chr3:111664090-111664193
64251 chr3 52361971 52361971 1 + T C COAD 52361970 + 52361950 52361990 41 TGGGCTTGGAGCCAGGGTCTCTGGACAGGAAACCTGTCCCG TGGGCTTGGAGCCAGGGTCTCCGGACAGGAAACCTGTCCCG < 41bp 0.732762326369393 0.532362723286157 0.655401 0.7323675 prediction 0.400799206166472 Functional Loss - DNAH1 ENSG00000114841 CDS Human protein_coding chr3:52361970 chr3:52361971 nonsynonymous SNV 0.893 0 22 hm5C_associated_SNPs_98784 0 0 2 PPIG POSTAR2 ENCODE chr3:52361904-52361979
64251 chr19 17452419 17452419 1 + G T LUSC 17452417 + 17452397 17452437 41 CCCTGGCGGCAGAGGCGCTGCGGGTGGCCCGGGGTCACCTG CCCTGGCGGCAGAGGCGCTGCGTGTGGCCCGGGGTCACCTG < 41bp 0.916330307952725 0.715932081020434 0.9234979 0.6829293 prediction 0.400796453864582 Functional Loss - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452417 chr19:17452419 synonymous SNV . 0 23 hm5C_associated_SNPs_98785 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17452408-17452446
64251 chr3 30713834 30713834 1 + G T LUSC 30713831 + 30713811 30713851 41 ACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACC ACCTCAAGAGCTCCAATATCCTCTTGAAGAACGACCTAACC < 41bp 0.700397328133845 0.315405649834151 0.44713482 0.0944753 prediction 0.400794656267689 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713831 chr3:30713834 nonsynonymous SNV 0.895 2 24 hm5C_associated_SNPs_98787 5 0 1 GRWD1 POSTAR2 ENCODE chr3:30713830-30713930
64251 chr3 30713833 30713833 1 + C T SKCM 30713831 + 30713811 30713851 41 ACCTCAAGAGCTCCAATATCCTCGTGAAGAACGACCTAACC ACCTCAAGAGCTCCAATATCCTTGTGAAGAACGACCTAACC < 41bp 0.700397328133845 0.412124321504326 0.44713482 0.26543257 prediction 0.400794656267689 Functional Loss - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713831 chr3:30713833 synonymous SNV . 0 23 hm5C_associated_SNPs_98788 1 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:30713791-30713833
64251 chr10 81109500 81109500 1 + C T SKCM 81109497 + 81109477 81109517 41 TTCCACAGGGTGATCCCTTCCTTCATGTGCCAGGTAATGTA TTCCACAGGGTGATCCCTTCCTTTATGTGCCAGGTAATGTA < 41bp 0.700394624769898 0.467089213473778 0.6229474 0.28575757 prediction 0.400789249539797 Functional Loss - PPIF ENSG00000108179 CDS Human protein_coding chr10:81109497 chr10:81109500 synonymous SNV . 0 24 hm5C_associated_SNPs_98791 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:81109477-81109501
64251 chr12 7025635 7025635 1 + T C LIHC 7025634 + 7025614 7025654 41 CTACGGGCATCTATGAGGCCCTGGAGCTGAGGGATGGAGAC CTACGGGCATCTATGAGGCCCCGGAGCTGAGGGATGGAGAC < 41bp 0.840232400564982 0.639846314639268 0.45874482 0.6877332 prediction 0.400772171851427 Functional Loss - ENO2 ENSG00000111674 CDS Human protein_coding chr12:7025634 chr12:7025635 nonsynonymous SNV 0.961 2 22 hm5C_associated_SNPs_98798 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:7025620-7025640
64251 chr7 148951525 148951525 1 + G A rs375757619 148951522 + 148951502 148951542 41 TTTAAGGGTGCAGCCCCTCGCCCGTCTGGGGGATGGAGGGG TTTAAGGGTGCAGCCCCTCGCCCATCTGGGGGATGGAGGGG < 41bp 0.70038546141186 0.443058556300586 0.049293816 0.040495187 prediction 0.400770922823721 Functional Loss - ZNF212 ENSG00000170260 UTR3 Human protein_coding chr7:148951522 chr7:148951525 . . 0 24 hm5C_associated_SNPs_98799 0 0 1 BUD13 POSTAR2 ENCODE chr7:148951508-148951558
64251 chr19 42729772 42729772 1 + G T COAD 42729768 + 42729748 42729788 41 ACATGACCAAGTTCCTCTACCACCGGCGCACTCACGCCGGC ACATGACCAAGTTCCTCTACCACCTGCGCACTCACGCCGGC < 41bp 0.708283096530614 0.50789901521572 0.39227402 0.17534867 prediction 0.400768162629788 Functional Loss - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729768 chr19:42729772 nonsynonymous SNV 0.934 4 25 hm5C_associated_SNPs_98802 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42729761-42729793
64251 chr12 117468473 117468473 1 + G A rs541899645 117468470 + 117468450 117468490 41 GGCCCAGTGTAAAAATGTCCCAAGTGTAGCCCCTCCCACCG GGCCCAGTGTAAAAATGTCCCAAATGTAGCCCCTCCCACCG < 41bp 0.766727785463257 0.566351149728654 0.29619247 0.07053405 prediction 0.400753271469206 Functional Loss - FBXW8 ENSG00000174989 UTR3 Human protein_coding chr12:117468470 chr12:117468473 . . 0 24 hm5C_associated_SNPs_98808 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:117468460-117468496
64251 chr7 141478666 141478666 1 + C T STAD 141478663 + 141478643 141478683 41 CTCCTGCTGAAGCGGAATATCTCCCCAAAGATCCCCAGGCT CTCCTGCTGAAGCGGAATATCTCTCCAAAGATCCCCAGGCT < 41bp 0.705611048733052 0.505235143163409 0.3650862 0.9269534 prediction 0.400751811139285 Functional Loss - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478663 chr7:141478666 synonymous SNV . 0 24 hm5C_associated_SNPs_98810 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr7:141478660-141478740
64251 chr17 56833490 56833490 1 + G A COAD 56833487 + 56833467 56833507 41 CCCGAACCCGAACCCGAACCCGAGTCCGAGCCCGAGCCCGA CCCGAACCCGAACCCGAACCCGAATCCGAGCCCGAGCCCGA < 41bp 0.700372907441305 0.475567734256046 0.4036924 0.27723143 prediction 0.40074581488261 Functional Loss - PPM1E ENSG00000175175 CDS Human protein_coding chr17:56833487 chr17:56833490 synonymous SNV . 0 24 hm5C_associated_SNPs_98811 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:56833465-56833492
64251 chr1 224922331 224922331 1 + C T LUSC 224922328 + 224922308 224922348 41 CCACCGGTGGTCATGAATGCCGACACTTTGAGTTACTGTCA CCACCGGTGGTCATGAATGCCGATACTTTGAGTTACTGTCA < 41bp 0.760587617230372 0.560217033247182 0.04944691 0.14542449 prediction 0.400741167966379 Functional Loss - CNIH3 ENSG00000143786 CDS Human protein_coding chr1:224922328 chr1:224922331 synonymous SNV . 0 24 hm5C_associated_SNPs_98813 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:224922320-224922340
64251 chr7 150093882 150093882 1 + G T LUAD 150093878 + 150093858 150093898 41 AGCCCCTCGCTTTCCTCCGGCGAGGGTCACTTTGTATGCCT AGCCCCTCGCTTTCCTCCGGCGAGTGTCACTTTGTATGCCT < 41bp 0.700368470171048 0.492900343631596 0.8930186 0.42630994 prediction 0.400736940342097 Functional Loss - ZNF775 ENSG00000196456 CDS Human protein_coding chr7:150093878 chr7:150093882 nonsynonymous SNV 0.837 2 25 hm5C_associated_SNPs_98816 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:150093880-150093900
64251 chr8 104427088 104427088 1 - C T ESCA 104427091 - 104427071 104427111 41 CGCCACGTCCGGTATGAGAACCTGATAGCGGGCGTGAGCGG CGCCACGTCCGGTATGAGAACCTAATAGCGGGCGTGAGCGG < 41bp 0.700367057356217 0.477597805708684 0.12367758 0.11846495 prediction 0.400734114712434 Functional Loss - SLC25A32 ENSG00000164933 CDS Human protein_coding chr8:104427091 chr8:104427088 synonymous SNV . 0 24 hm5C_associated_SNPs_98817 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr8:104427085-104427097
64251 chr3 197483421 197483421 1 + G T UCEC 197483419 + 197483399 197483439 41 GAGTGCGATGGGGAATCCAACAGAATTCTGGTAAGTTTTGA GAGTGCGATGGGGAATCCAACATAATTCTGGTAAGTTTTGA < 41bp 0.700361937545243 0.356996337246738 0.58529377 0.2348409 prediction 0.400723875090486 Functional Loss - FYTTD1 ENSG00000122068 CDS Human protein_coding chr3:197483419 chr3:197483421 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_98819 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr3:197483394-197483421
64251 chr15 84237334 84237334 1 + G A ESCA 84237331 + 84237311 84237351 41 CTGTGTCGAAGATCCGAGGGCAGGTGAAGACCACAGGATAC CTGTGTCGAAGATCCGAGGGCAGATGAAGACCACAGGATAC < 41bp 0.700359435450372 0.456991556787682 0.9103552 0.8946709 prediction 0.400718870900744 Functional Loss - SH3GL3 ENSG00000140600 CDS Human protein_coding chr15:84237331 chr15:84237334 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_98820 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr15:84237304-84237341
64251 chr17 38504713 38504713 1 + C T OV 38504710 + 38504690 38504730 41 GGGGTCAGCGCCTGTGAGGGCTGCAAGGTGAGTTGAAGGGG GGGGTCAGCGCCTGTGAGGGCTGTAAGGTGAGTTGAAGGGG < 41bp 0.700358710722171 0.480133379670716 0.27786234 0.34340554 prediction 0.400717421444342 Functional Loss - RARA ENSG00000131759 CDS Human protein_coding chr17:38504710 chr17:38504713 synonymous SNV . 0 24 hm5C_associated_SNPs_98822 0 0 1 PRPF8 POSTAR2 ENCODE chr17:38504699-38504757
64251 chrX 219881 219881 1 + G A rs151328668 219878 + 219858 219898 41 ACGGCTCTGCAGGATCAGGGCTCGGGCAGGCCCCGCGGAGA ACGGCTCTGCAGGATCAGGGCTCAGGCAGGCCCCGCGGAGA < 41bp 0.754181060782669 0.553826460019273 0.34592837 0.33214927 prediction 0.400709201526791 Functional Loss - PLCXD1 ENSG00000182378 UTR3 Human protein_coding chrX:219878 chrX:219881 . . 0 24 hm5C_associated_SNPs_98826 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:219880-219920
64251 chr6 33658853 33658853 1 + G A rs2229641 33658850 + 33658830 33658870 41 TCCTCAAGGATGACTTCATTCTCGAGGTCGACCGGCTGCCC TCCTCAAGGATGACTTCATTCTCAAGGTCGACCGGCTGCCC < 41bp 0.793727099285564 0.593372618873584 0.07766625 0.022662997 prediction 0.40070896082396 Functional Loss - ITPR3 ENSG00000096433 CDS Human protein_coding chr6:33658850 chr6:33658853 nonsynonymous SNV 0.987 5 24 hm5C_associated_SNPs_98827 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917673 chr6:33658851-33658871
64251 chr6 7581095 7581095 1 + C T CESC 7581093 + 7581073 7581113 41 TGTGAAGGACCAGGATATCACGCGGTTCCAGAACTCTCTGA TGTGAAGGACCAGGATATCACGTGGTTCCAGAACTCTCTGA < 41bp 0.831395433943283 0.631042506999941 0.86258745 0.8817229 prediction 0.400705853886683 Functional Loss - DSP ENSG00000096696 CDS Human protein_coding chr6:7581093 chr6:7581095 nonsynonymous SNV 0.012 2 23 hm5C_associated_SNPs_98829 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:7581080-7581124
64251 chr17 48557276 48557276 1 + G T CESC 48557272 + 48557252 48557292 41 TGTTCTTTGGTGGGGGGACCCCCAGTCTAGCCAGTCCCCAC TGTTCTTTGGTGGGGGGACCCCCATTCTAGCCAGTCCCCAC < 41bp 0.700351013429393 0.498962978445181 0.47680476 0.5699062 prediction 0.400702026858786 Functional Loss - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557272 chr17:48557276 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_98830 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48557261-48557288
64251 chr5 154346296 154346296 1 + G A rs3749671 154346293 + 154346273 154346313 41 GCCTGAAACGCATCCGCTACCATGGCAGAGGTCGCTTTGGG GCCTGAAACGCATCCGCTACCATAGCAGAGGTCGCTTTGGG < 41bp 0.792096766240376 0.591747336911887 0.52592415 0.35969394 prediction 0.400698858656979 Functional Loss - MRPL22 ENSG00000082515 CDS Human protein_coding chr5:154346293 chr5:154346296 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_98832 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:154346273-154346299
64251 chr19 35510307 35510307 1 + C T PRAD 35510304 + 35510284 35510324 41 TGTCCCTGCAGACGCTGTTCCGGCGCGGCCCCCAGGCCGGC TGTCCCTGCAGACGCTGTTCCGGTGCGGCCCCCAGGCCGGC < 41bp 0.74559935445081 0.545250459006662 0.9036546 0.86377424 prediction 0.400697790888295 Functional Loss - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510304 chr19:35510307 nonsynonymous SNV 0.989 3 24 hm5C_associated_SNPs_98834 0 0 4 METAP2 POSTAR2 ENCODE chr19:35510302-35510337
64251 chr4 106848542 106848542 1 + G T KIRC 106848539 + 106848519 106848559 41 GGTGAATGTATCGGGCCAAACAAGTGCAAGTGTCATCCTGG GGTGAATGTATCGGGCCAAACAATTGCAAGTGTCATCCTGG < 41bp 0.700345025501376 0.301805808933037 0.64188087 0.14188802 prediction 0.400690051002751 Functional Loss - NPNT ENSG00000168743 CDS Human protein_coding chr4:106848539 chr4:106848542 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_98836 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:106848536-106848562
64251 chr19 36603843 36603843 1 + A T rs149534478 36603841 + 36603821 36603861 41 TTTCATGACGCCTTCGATCTCAAGCGCCACATGAGGACTCA TTTCATGACGCCTTCGATCTCATGCGCCACATGAGGACTCA < 41bp 0.71805578400392 0.517713054129458 0.4364207 0.12466285 prediction 0.400685459748924 Functional Loss - OVOL3 ENSG00000105261 CDS Human protein_coding chr19:36603841 chr19:36603843 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_98839 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36603820-36603850
64251 chr20 60448842 60448842 1 + G A SKCM 60448839 + 60448819 60448859 41 GACGACAGCACCACGGCCAACGGGATGGTGCGGTACCGGAT GACGACAGCACCACGGCCAACGGAATGGTGCGGTACCGGAT < 41bp 0.797783342544379 0.597442116321118 0.84585524 0.43624482 prediction 0.400682452446521 Functional Loss - CDH4 ENSG00000179242 CDS Human protein_coding chr20:60448839 chr20:60448842 synonymous SNV . 0 24 hm5C_associated_SNPs_98840 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:60448826-60448848
64251 chr1 45232618 45232618 1 + C T PRAD 45232615 + 45232595 45232635 41 AAGCCAAGCATTTCTCAGCCCTGCGAGGTGGGTGTGGCTGG AAGCCAAGCATTTCTCAGCCCTGTGAGGTGGGTGTGGCTGG < 41bp 0.700338598331232 0.474376008973694 0.16833046 0.17532247 prediction 0.400677196662463 Functional Loss - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45232615 chr1:45232618 stopgain 0.432 0 24 hm5C_associated_SNPs_98843 0 0 1 PRPF8 POSTAR2 ENCODE chr1:45232613-45232658
64251 chr1 46073286 46073286 1 + G A SKCM 46073283 + 46073263 46073303 41 TCACTTCTGGGAAGCCAGAACAGGAAGTACCAGATGCTGAG TCACTTCTGGGAAGCCAGAACAGAAAGTACCAGATGCTGAG < 41bp 0.770372705047112 0.570038294256067 0.8649467 0.42026147 prediction 0.400668821582091 Functional Loss - NASP ENSG00000132780 CDS Human protein_coding chr1:46073283 chr1:46073286 nonsynonymous SNV 0.934 1 24 hm5C_associated_SNPs_98847 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46073280-46073307
64251 chr19 41920030 41920030 1 + C T rs34442879 41920028 + 41920008 41920048 41 AGTGCCGCCGCCCTGGACAACACGGACCTGGTGTTTGGCCA AGTGCCGCCGCCCTGGACAACATGGACCTGGTGTTTGGCCA < 41bp 0.858207105541298 0.657873590026001 0.49340174 0.72100013 prediction 0.400667031030594 Functional Loss - BCKDHA ENSG00000248098;ENSG00000255730 CDS Human other chr19:41920028 chr19:41920030 nonsynonymous SNV 0.969 4 23 hm5C_associated_SNPs_98848 2 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:41920023-41920050
64251 chr10 89264870 89264870 1 + T C UCEC 89264869 + 89264849 89264889 41 GCTATTGTCGGGCCCCGAGGCTCCGTGGCGGGACCCTGAGC GCTATTGTCGGGCCCCGAGGCCCCGTGGCGGGACCCTGAGC < 41bp 0.822385134882212 0.622052126850482 0.5256955 0.35811788 prediction 0.400666016063459 Functional Loss - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89264869 chr10:89264870 synonymous SNV . 0 22 hm5C_associated_SNPs_98849 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:89264855-89264879
64251 chr1 113657106 113657106 1 + C T COAD 113657103 + 113657083 113657123 41 GACAGTAACACGAGGTGAAACTGCGGTGTTACAGTGCATAG GACAGTAACACGAGGTGAAACTGTGGTGTTACAGTGCATAG < 41bp 0.794775610134134 0.594448601229987 0.8999158 0.82509947 prediction 0.400654017808293 Functional Loss - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657103 chr1:113657106 nonsynonymous SNV 0.945 1 24 hm5C_associated_SNPs_98855 0 0 4 GPKOW POSTAR2 ENCODE chr1:113657027-113657109
64251 chr1 1420440 1420440 1 + G T UCEC 1420437 + 1420417 1420457 41 GCTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCAC GCTGTCGGGGTCTACTCAGCCAATAATGCGACAGCCGTCAC < 41bp 0.938119012980717 0.737793396558082 0.43379483 0.8715453 prediction 0.400651232845269 Functional Loss - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1420437 chr1:1420440 nonsynonymous SNV 0.038 5 24 hm5C_associated_SNPs_98858 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:1420440-1420460
64251 chr17 46023278 46023278 1 + T C BLCA 46023277 + 46023257 46023297 41 CCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCAA CCTGAGGAGGAGGCTGAGTGCCACTTCCACTCCCGCCCCAA < 41bp 0.70032456046405 0.448107661772647 0.15200022 0.107663214 prediction 0.4006491209281 Functional Loss - PNPO ENSG00000108439 CDS Human protein_coding chr17:46023277 chr17:46023278 nonsynonymous SNV 0.867 4 22 hm5C_associated_SNPs_98859 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:46023276-46023298
64251 chr8 21956540 21956540 1 + C T GBM 21956537 + 21956517 21956557 41 TTCTTGGGCTGGTTTGATTACTGCGACCACCTCATCACAGA TTCTTGGGCTGGTTTGATTACTGTGACCACCTCATCACAGA < 41bp 0.700317725112265 0.488327302801538 0.08908865 0.037061602 prediction 0.40063545022453 Functional Loss - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21956537 chr8:21956540 synonymous SNV . 0 24 hm5C_associated_SNPs_98864 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:21956532-21956556
64251 chr8 98656893 98656893 1 + G C rs567918405 98656890 + 98656870 98656910 41 CGGTACCCCGGCTGGGTGATCCTGGTGGGCACTGGCGCGCT CGGTACCCCGGCTGGGTGATCCTCGTGGGCACTGGCGCGCT < 41bp 0.700315883129657 0.498524799077849 0.6841897 0.41439953 prediction 0.400631766259314 Functional Loss - MTDH ENSG00000147649 CDS Human protein_coding chr8:98656890 chr8:98656893 synonymous SNV . 0 24 hm5C_associated_SNPs_98865 0 0 11 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:98656872-98656893
64251 chr9 36117066 36117066 1 + G A rs151184551 36117063 + 36117043 36117083 41 GAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGA GAGTGTGTACCAAGACAGCTCGCATGTGACCAGGTCCAAGA < 41bp 0.700312601316168 0.460088918650223 0.10594162 0.023179501 prediction 0.400625202632337 Functional Loss - RECK ENSG00000122707 CDS Human protein_coding chr9:36117063 chr9:36117066 synonymous SNV . 0 24 hm5C_associated_SNPs_98868 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr9:36117032-36117075
64251 chr3 45038708 45038708 1 + T C UCEC 45038707 + 45038687 45038727 41 AAAGACCCTCTGCATTAGTCCTCGGGAGCACTGCTGGGTTC AAAGACCCTCTGCATTAGTCCCCGGGAGCACTGCTGGGTTC < 41bp 0.852360037991112 0.652048781376121 0.19999775 0.30424786 prediction 0.400622513229982 Functional Loss - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45038707 chr3:45038708 synonymous SNV . 0 22 hm5C_associated_SNPs_98871 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:45038700-45038720
64251 chr8 11629028 11629028 1 + G A SKCM 11629025 + 11629005 11629045 41 TTTGTGGGTCAGCAGGTGGTCAAGACAGGGGGCAGCAGTAA TTTGTGGGTCAGCAGGTGGTCAAAACAGGGGGCAGCAGTAA < 41bp 0.785078249871773 0.584778289742872 0.906713 0.8605394 prediction 0.400599920257803 Functional Loss - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11629025 chr8:11629028 synonymous SNV . 0 24 hm5C_associated_SNPs_98882 0 0 1 DDX3X POSTAR2 ENCODE chr8:11628981-11629066
64251 chr1 55505617 55505617 1 + G T UCEC 55505615 + 55505595 55505635 41 CGTGCGCAGGAGGACGAGGACGGCGACTACGAGGAGCTGGT CGTGCGCAGGAGGACGAGGACGTCGACTACGAGGAGCTGGT < 41bp 0.700291052100726 0.347143985558675 0.8746407 0.45104036 prediction 0.400582104201452 Functional Loss - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55505615 chr1:55505617 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_98893 0 0 4 GEMIN5 POSTAR2 ENCODE chr1:55505606-55505701
64251 chr1 154960626 154960626 1 + C T UCEC 154960623 + 154960603 154960643 41 CCTTCTTTCTGTGCCGGACACTGCGCTCCCTAGGGGTCCAG CCTTCTTTCTGTGCCGGACACTGTGCTCCCTAGGGGTCCAG < 41bp 0.78750051793049 0.587210600517547 0.11182329 0.11807451 prediction 0.400579834825887 Functional Loss - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960623 chr1:154960626 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_98895 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:154960582-154960635
64251 chr11 60689491 60689491 1 + T C STAD 60689490 + 60689470 60689510 41 CTCCTGGCCTTGCTGATCCTCTACGCCCTGCTGAGCCGGCT CTCCTGGCCTTGCTGATCCTCCACGCCCTGCTGAGCCGGCT < 41bp 0.700289711620852 0.45119759933627 0.4181772 0.32941985 prediction 0.400579423241704 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689490 chr11:60689491 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_98896 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:60689466-60689498
64251 chr11 60689493 60689493 1 + C T UCEC 60689490 + 60689470 60689510 41 CTCCTGGCCTTGCTGATCCTCTACGCCCTGCTGAGCCGGCT CTCCTGGCCTTGCTGATCCTCTATGCCCTGCTGAGCCGGCT < 41bp 0.700289711620852 0.495054482288571 0.4181772 0.38381884 prediction 0.400579423241704 Functional Loss - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689490 chr11:60689493 synonymous SNV . 0 24 hm5C_associated_SNPs_98897 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:60689466-60689498
64251 chr6 37358613 37358613 1 + G A SKCM 37358610 + 37358590 37358630 41 TCTGGAGGATTCTCTCTAGCCGTGACTCCGCTGCTCTGAAG TCTGGAGGATTCTCTCTAGCCGTAACTCCGCTGCTCTGAAG < 41bp 0.809673987450026 0.609384484157479 0.6391934 0.33735603 prediction 0.400579006585094 Functional Loss - RNF8 ENSG00000112130 CDS Human protein_coding chr6:37358610 chr6:37358613 synonymous SNV . 0 24 hm5C_associated_SNPs_98898 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:37358581-37358678
64251 chrX 123034511 123034511 1 + A C rs5956583 123034510 + 123034490 123034530 41 ATGCTCAGAAAGACAGTATGCAAGATGAGTCAAGTCAGACT ATGCTCAGAAAGACAGTATGCCAGATGAGTCAAGTCAGACT < 41bp 0.700288495895211 0.445556396958455 0.3959135 0.5369624 prediction 0.400576991790423 Functional Loss - XIAP ENSG00000101966 CDS Human protein_coding chrX:123034510 chrX:123034511 nonsynonymous SNV 0.626 1 22 hm5C_associated_SNPs_98900 2 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:123034495-123034530
64251 chr20 2128405 2128405 1 + G A rs191490864 2128402 + 2128382 2128422 41 CTAGGCCTGTCTGGCAGCCCCCAGACAGACGTAGCTCCTGG CTAGGCCTGTCTGGCAGCCCCCAAACAGACGTAGCTCCTGG < 41bp 0.700288409947011 0.474515618282894 0.23610717 0.115413904 prediction 0.400576819894023 Functional Loss - STK35 ENSG00000125834 UTR3 Human protein_coding chr20:2128402 chr20:2128405 . . 0 24 hm5C_associated_SNPs_98901 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:2128400-2128420
64251 chr6 43400532 43400532 1 + C T rs142083115 43400530 + 43400510 43400550 41 GGCACACTGGCAGGAGGGGGCACGGCTGTGGAGGGCCTTGT GGCACACTGGCAGGAGGGGGCATGGCTGTGGAGGGCCTTGT < 41bp 0.70028833145363 0.452276083493658 0.8874433 0.8825203 prediction 0.40057666290726 Functional Loss - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43400530 chr6:43400532 nonsynonymous SNV 0.467 3 23 hm5C_associated_SNPs_98902 0 0 2 XPO5 POSTAR2 ENCODE chr6:43400451-43400579
64251 chr19 4961551 4961551 1 + G A UCEC 4961548 + 4961528 4961568 41 CGCTGTCCGACGAAGGCGGCCACGGACGGACGCCAGCACAC CGCTGTCCGACGAAGGCGGCCACAGACGGACGCCAGCACAC < 41bp 0.822949321317179 0.622661595536578 0.67651033 0.5704111 prediction 0.400575451561201 Functional Loss - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4961548 chr19:4961551 . . 0 24 hm5C_associated_SNPs_98903 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:4961540-4961560
64251 chr22 32884867 32884867 1 + G A rs373438355 32884864 + 32884844 32884884 41 CTGGAGTGCCGTGGCGCTATCTCGGCTCACTTCAACTTCCA CTGGAGTGCCGTGGCGCTATCTCAGCTCACTTCAACTTCCA < 41bp 0.815531863877455 0.615248481547513 0.78772247 0.42134753 prediction 0.400566764659884 Functional Loss - FBXO7 ENSG00000100225 intronic Human protein_coding chr22:32884864 chr22:32884867 . . 0 24 hm5C_associated_SNPs_98907 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:32884745-32884873
64251 chr12 58174307 58174307 1 + G A STAD 58174304 + 58174284 58174324 41 CCTCCAAGATGAGAAAGGAGCATGGGACAGAGAGCTTCTTT CCTCCAAGATGAGAAAGGAGCATAGGACAGAGAGCTTCTTT < 41bp 0.805229240910097 0.604946144422594 0.41331306 0.108661234 prediction 0.400566192975005 Functional Loss - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58174304 chr12:58174307 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_98908 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr12:58174307-58174308
64251 chr9 96415578 96415578 1 + C T COAD 96415575 + 96415555 96415595 41 GTGACCAAGTACTGCCTAATCTGCGTGAAGGACAGTTACAC GTGACCAAGTACTGCCTAATCTGTGTGAAGGACAGTTACAC < 41bp 0.788708959360948 0.588429811332657 0.21902695 0.13218224 prediction 0.400558296056581 Functional Loss - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96415575 chr9:96415578 synonymous SNV . 0 24 hm5C_associated_SNPs_98912 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:96415569-96415597
64251 chr9 133491878 133491878 1 + G T UCEC 133491874 + 133491854 133491894 41 AAAGTGGGTCTGGTCATCGGCAGAGGAGGGGAAACAATCAA AAAGTGGGTCTGGTCATCGGCAGATGAGGGGAAACAATCAA < 41bp 0.726029064220985 0.525755192185336 0.9076128 0.88680464 prediction 0.400547744071299 Functional Loss - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133491874 chr9:133491878 stopgain 1.000 1 25 hm5C_associated_SNPs_98916 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:133491849-133491885
64251 chr14 59014576 59014576 1 + G A UCEC 59014573 + 59014553 59014593 41 TGATGCTGCCGTCAGTGAACCTCGAGGACTGCTCTCAGTCT TGATGCTGCCGTCAGTGAACCTCAAGGACTGCTCTCAGTCT < 41bp 0.818253665488542 0.617981806339417 0.53627324 0.28099334 prediction 0.400543718298251 Functional Loss - KIAA0586 ENSG00000100578 CDS Human protein_coding chr14:59014573 chr14:59014576 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_98919 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:59014569-59014602
64251 chr4 128811266 128811266 1 + G T ESCA 128811264 + 128811244 128811284 41 TTTTGGCTCAGATCCTCTTTCTGAACAGAGCAAGACTAGGG TTTTGGCTCAGATCCTCTTTCTTAACAGAGCAAGACTAGGG < 41bp 0.700270828009835 0.381778819378077 0.16751742 0.08388674 prediction 0.40054165601967 Functional Loss - PLK4 ENSG00000142731 CDS Human protein_coding chr4:128811264 chr4:128811266 stopgain 0.799 0 23 hm5C_associated_SNPs_98920 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr4:128811223-128811271
64251 chr22 35661440 35661440 1 + G T THCA 35661436 + 35661416 35661456 41 TTTAGGACTTTCTGCCGTGCCAGTGGGAGAGGTCACAGTGA TTTAGGACTTTCTGCCGTGCCAGTTGGAGAGGTCACAGTGA < 41bp 0.712952893780421 0.512682786896691 0.8004789 0.22070321 prediction 0.400540213767461 Functional Loss - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661436 chr22:35661440 synonymous SNV . 0 25 hm5C_associated_SNPs_98921 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:35661407-35661457
64251 chr7 150034674 150034674 1 + G A COAD 150034671 + 150034651 150034691 41 ACCGCCAGGCCAGCGACAGCCTGGCCCAGGCGGAGCAGGTA ACCGCCAGGCCAGCGACAGCCTGACCCAGGCGGAGCAGGTA < 41bp 0.797880516660802 0.597618868445298 0.2437621 0.087224215 prediction 0.400523296431007 Functional Loss - LRRC61 ENSG00000127399 CDS Human protein_coding chr7:150034671 chr7:150034674 nonsynonymous SNV 0.774 2 24 hm5C_associated_SNPs_98936 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr7:150034660-150034680
64251 chr3 40528333 40528333 1 + C T PAAD 40528330 + 40528310 40528350 41 GACTGAGAATGAGGAAAAAACTGCACAGCTAAACATTTCTA GACTGAGAATGAGGAAAAAACTGTACAGCTAAACATTTCTA < 41bp 0.745772871122527 0.545516157723758 0.059725672 0.044798672 prediction 0.400513426797538 Functional Loss - ZNF619 ENSG00000177873 CDS Human protein_coding chr3:40528330 chr3:40528333 nonsynonymous SNV 0.012 0 24 hm5C_associated_SNPs_98938 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:40528301-40528335
64251 chr11 73102216 73102216 1 + C T rs146023545 73102214 + 73102194 73102234 41 TTGGGCCTTGGGGGGTTCCCCGCGTTCCATGTCAACCATGT TTGGGCCTTGGGGGGTTCCCCGTGTTCCATGTCAACCATGT < 41bp 0.700254122957615 0.428440629643893 0.75264895 0.47386557 prediction 0.40050824591523 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73102214 chr11:73102216 synonymous SNV . 0 23 hm5C_associated_SNPs_98940 0 0 1 BUD13 POSTAR2 ENCODE chr11:73102180-73102249
64251 chr11 73102217 73102217 1 + G A UCEC 73102214 + 73102194 73102234 41 TTGGGCCTTGGGGGGTTCCCCGCGTTCCATGTCAACCATGT TTGGGCCTTGGGGGGTTCCCCGCATTCCATGTCAACCATGT < 41bp 0.700254122957615 0.440905706835417 0.75264895 0.289689 prediction 0.40050824591523 Functional Loss - RELT ENSG00000054967 CDS Human protein_coding chr11:73102214 chr11:73102217 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_98941 0 0 2 BUD13 POSTAR2 ENCODE chr11:73102180-73102249
64251 chr17 61766965 61766965 1 + C T rs77148458 61766962 + 61766942 61766982 41 AACTTGTTCACCCTGGTGCCCTCCAGCCGCTCCCTGAGCAC AACTTGTTCACCCTGGTGCCCTCTAGCCGCTCCCTGAGCAC < 41bp 0.700253273985344 0.461192364447175 0.94146276 0.87352645 prediction 0.400506547970689 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61766962 chr17:61766965 synonymous SNV . 0 24 hm5C_associated_SNPs_98942 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:61766938-61766976
64251 chr17 61766963 61766963 1 + T C LIHC 61766962 + 61766942 61766982 41 AACTTGTTCACCCTGGTGCCCTCCAGCCGCTCCCTGAGCAC AACTTGTTCACCCTGGTGCCCCCCAGCCGCTCCCTGAGCAC < 41bp 0.700253273985344 0.406741205702656 0.94146276 0.012520969 prediction 0.400506547970689 Functional Loss - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61766962 chr17:61766963 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_98943 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:61766938-61766976
64251 chr6 126080351 126080351 1 + C T SKCM 126080348 + 126080328 126080368 41 GAAGTTGCGCGGTACCTGAGCTCCGTGGAAGGCCTGGACTC GAAGTTGCGCGGTACCTGAGCTCTGTGGAAGGCCTGGACTC < 41bp 0.79258739720938 0.592337014955315 0.32261574 0.20785794 prediction 0.400500764508128 Functional Loss - HEY2 ENSG00000135547 CDS Human protein_coding chr6:126080348 chr6:126080351 synonymous SNV . 0 24 hm5C_associated_SNPs_98945 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:126080329-126080365
64251 chr4 128739562 128739562 1 + G A LGG 128739559 + 128739539 128739579 41 AGAAGAGGAAATTGATCATACAGGAGCCAAAACAAAGGTTT AGAAGAGGAAATTGATCATACAGAAGCCAAAACAAAGGTTT < 41bp 0.799819512474189 0.599569298824963 0.2008861 0.0715974 prediction 0.400500427298452 Functional Loss - HSPA4L ENSG00000164070 CDS Human protein_coding chr4:128739559 chr4:128739562 nonsynonymous SNV 0.972 0 24 hm5C_associated_SNPs_98946 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:128739526-128739564
64251 chr1 214170860 214170860 1 + G A LUSC 214170857 + 214170837 214170877 41 TGGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAA TGGCTGAAAACAAGCCGAAGCGAAAAGGCAACAACAAAGAA < 41bp 0.73071310708066 0.530465791662651 0.29186332 0.18887189 prediction 0.400494630836018 Functional Loss - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170857 chr1:214170860 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_98949 0 0 2 GRWD1 POSTAR2 ENCODE chr1:214170782-214170869
64251 chr6 25665243 25665243 1 + A C LUSC 25665242 + 25665222 25665262 41 CGGGAAAACCCACTGGACAGCAGCGTGGAGTTTATGCAGGT CGGGAAAACCCACTGGACAGCCGCGTGGAGTTTATGCAGGT < 41bp 0.700246552849677 0.431814468719455 0.3296641 0.3106106 prediction 0.400493105699353 Functional Loss - SCGN ENSG00000079689 CDS Human protein_coding chr6:25665242 chr6:25665243 nonsynonymous SNV 0.961 4 22 hm5C_associated_SNPs_98951 0 0 1 PRPF8 POSTAR2 ENCODE chr6:25665242-25665292
64251 chr6 25665245 25665245 1 + C T STAD 25665242 + 25665222 25665262 41 CGGGAAAACCCACTGGACAGCAGCGTGGAGTTTATGCAGGT CGGGAAAACCCACTGGACAGCAGTGTGGAGTTTATGCAGGT < 41bp 0.700246552849677 0.484344365576842 0.3296641 0.3519585 prediction 0.400493105699353 Functional Loss - SCGN ENSG00000079689 CDS Human protein_coding chr6:25665242 chr6:25665245 synonymous SNV . 0 24 hm5C_associated_SNPs_98952 0 0 1 PRPF8 POSTAR2 ENCODE chr6:25665242-25665292
64251 chr9 123914850 123914850 1 + C T COAD 123914847 + 123914827 123914867 41 GGTGGATGAGAGCATCCAAGCGGCAGTCGGAGAAAGAAATG GGTGGATGAGAGCATCCAAGCGGTAGTCGGAGAAAGAAATG < 41bp 0.700238512407029 0.480016098461613 0.5367847 0.6251912 prediction 0.400477024814058 Functional Loss - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123914847 chr9:123914850 stopgain 0.547 0 24 hm5C_associated_SNPs_98961 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:123914843-123914877
64251 chr16 23672560 23672560 1 + A T rs11545871 23672556 + 23672536 23672576 41 GGAAGATTGTGTGGTCAACGCAGCACAGATTGGTTCCTATG GGAAGATTGTGTGGTCAACGCAGCTCAGATTGGTTCCTATG < 41bp 0.700237719740991 0.35441674439027 0.15404099 0.17206836 prediction 0.400475439481982 Functional Loss - DCTN5 ENSG00000166847 CDS Human protein_coding chr16:23672556 chr16:23672560 synonymous SNV . 0 25 hm5C_associated_SNPs_98963 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:23672521-23672571
64251 chr17 37819094 37819094 1 + C T COAD 37819092 + 37819072 37819112 41 TACCTCATCCACCAGAGCCTCGCGGCCACCATGTTTGAATT TACCTCATCCACCAGAGCCTCGTGGCCACCATGTTTGAATT < 41bp 0.700236575702225 0.436644561815475 0.18692514 0.096661955 prediction 0.40047315140445 Functional Loss - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819092 chr17:37819094 nonsynonymous SNV 0.861 2 23 hm5C_associated_SNPs_98965 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:37819071-37819104
64251 chr14 73420907 73420907 1 + A T STAD 73420903 + 73420883 73420923 41 CCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTC CCTGGCATGCTCTGCAGTTTCCGGTTCCCTGGTGCCTGGTC < 41bp 0.907222077356617 0.706993199150595 0.91911846 0.7837193 prediction 0.400457756412045 Functional Loss - DCAF4 ENSG00000119599 CDS Human protein_coding chr14:73420903 chr14:73420907 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_98975 0 0 2 BUD13 POSTAR2 ENCODE chr14:73420874-73420998
64251 chr4 129782917 129782917 1 + T C LIHC 129782916 + 129782896 129782936 41 CCTGTGCTTTTGACCGGGGCCTGGAGATGAAGACCATCTTA CCTGTGCTTTTGACCGGGGCCCGGAGATGAAGACCATCTTA < 41bp 0.835014779755867 0.634786293630866 0.70197755 0.86375177 prediction 0.400456972250002 Functional Loss - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129782916 chr4:129782917 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_98976 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr4:129782890-129782919
64251 chr4 38907400 38907400 1 + G T HNSC 38907396 + 38907376 38907416 41 TAACAGATGCAGCCACAGATCAGGGCCCTGCAGAAAGCCCA TAACAGATGCAGCCACAGATCAGGTCCCTGCAGAAAGCCCA < 41bp 0.762977389345008 0.562750104175387 0.92959386 0.41427597 prediction 0.400454570339243 Functional Loss - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38907396 chr4:38907400 nonsynonymous SNV 0.377 0 25 hm5C_associated_SNPs_98977 0 0 4 DDX24 POSTAR2 ENCODE chr4:38907375-38907476
64251 chr2 241569981 241569981 1 + C T UCEC 241569978 + 241569958 241569998 41 GCCCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGA GCCCTGGCCCAGAGGCCACCCACTGACGTGGGGCAGGCAGA < 41bp 0.732029591117556 0.531806440109461 0.15863398 0.13838977 prediction 0.400446302016192 Functional Loss - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569978 chr2:241569981 synonymous SNV . 0 24 hm5C_associated_SNPs_98979 0 0 1 RPS3 POSTAR2 ENCODE chr2:241569941-241570000
64251 chr3 101540678 101540678 1 + C T UCEC 101540676 + 101540656 101540696 41 TCTCAGGGGTTGGAGTATATCTCGTCGATGCCTGGGAGATG TCTCAGGGGTTGGAGTATATCTTGTCGATGCCTGGGAGATG < 41bp 0.700220335958225 0.414188076963751 0.7482723 0.5350026 prediction 0.40044067191645 Functional Loss - NXPE3 ENSG00000144815 CDS Human protein_coding chr3:101540676 chr3:101540678 synonymous SNV . 0 23 hm5C_associated_SNPs_98982 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:101540645-101540679
64251 chr13 114290351 114290351 1 + G T LUSC 114290349 + 114290329 114290369 41 ATGCGGAGCAGCAGGCCAGCCGGCCACCGCCACCCAACTCA ATGCGGAGCAGCAGGCCAGCCGTCCACCGCCACCCAACTCA < 41bp 0.700215477231855 0.335990474820375 0.3054319 0.1288651 prediction 0.40043095446371 Functional Loss - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290349 chr13:114290351 synonymous SNV . 0 23 hm5C_associated_SNPs_98987 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:114290339-114290390
64251 chr11 67047151 67047151 1 + G C HNSC 67047148 + 67047128 67047168 41 AAGGCCACCTGGGGAAGAAGCAGGTGCCTCCGGATCTCTTC AAGGCCACCTGGGGAAGAAGCAGCTGCCTCCGGATCTCTTC < 41bp 0.760232249664297 0.560017714448212 0.92156494 0.85621417 prediction 0.400429070432169 Functional Loss - GRK2 ENSG00000173020 CDS Human protein_coding chr11:67047148 chr11:67047151 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_98991 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:67047147-67047170
64251 chr9 124080948 124080948 1 + G A CESC 124080945 + 124080925 124080965 41 TCTGCCTCCCCTCCCCAGGTCTCGGTCCTTCCTGAGGGCGG TCTGCCTCCCCTCCCCAGGTCTCAGTCCTTCCTGAGGGCGG < 41bp 0.70021133827401 0.460512224142182 0.17933154 0.091793895 prediction 0.400422676548021 Functional Loss - GSN ENSG00000148180 CDS Human protein_coding chr9:124080945 chr9:124080948 synonymous SNV . 0 24 hm5C_associated_SNPs_98995 0 0 7 BUD13 POSTAR2 ENCODE chr9:124080926-124080967
64251 chr1 48701532 48701532 1 + G A SKCM 48701529 + 48701509 48701549 41 TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGC TCCGCAGGAAGTCAACAGAGCAGAAGCTGATGGTGGTGGGC < 41bp 0.834942961990903 0.634738890014524 0.8841235 0.6762914 prediction 0.400408143952759 Functional Loss - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48701529 chr1:48701532 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_98998 0 0 2 PPIG POSTAR2 ENCODE chr1:48701501-48701549
64251 chr12 113385865 113385865 1 + G T LUSC 113385863 + 113385843 113385883 41 GCTATGACCACCCATGCTTTCTGAGGGGGATGGGGGACCCA GCTATGACCACCCATGCTTTCTTAGGGGGATGGGGGACCCA < 41bp 0.700203929630768 0.340162528538927 0.41407618 0.1830298 prediction 0.400407859261536 Functional Loss - OAS3 ENSG00000111331 CDS Human protein_coding chr12:113385863 chr12:113385865 synonymous SNV . 0 23 hm5C_associated_SNPs_98999 0 0 1 PPIG POSTAR2 ENCODE chr12:113385817-113385903
64251 chr2 231281034 231281034 1 + T C STAD 231281033 + 231281013 231281053 41 TGGCAGGTGGGGGCGGCGACCTGAGCACCAGGTGAGTCTTT TGGCAGGTGGGGGCGGCGACCCGAGCACCAGGTGAGTCTTT < 41bp 0.711619114180663 0.511417716984513 0.3173958 0.6906995 prediction 0.4004027943923 Functional Loss - SP100 ENSG00000067066 CDS Human protein_coding chr2:231281033 chr2:231281034 nonsynonymous SNV 0.038 3 22 hm5C_associated_SNPs_99004 0 0 3 DDX3X POSTAR2 ENCODE chr2:231281010-231281043
64251 chr7 94897919 94897919 1 + G A UCEC 94897916 + 94897896 94897936 41 GGATTCAAAAGCACTGAAAACTCGAGCCCAGCTCTCTGTGA GGATTCAAAAGCACTGAAAACTCAAGCCCAGCTCTCTGTGA < 41bp 0.773698492600929 0.573497995396281 0.62118953 0.36906314 prediction 0.400400994409297 Functional Loss - PPP1R9A ENSG00000158528 CDS Human protein_coding chr7:94897916 chr7:94897919 nonsynonymous SNV 0.976 3 24 hm5C_associated_SNPs_99005 0 0 1 GRWD1 POSTAR2 ENCODE chr7:94897863-94897950
64251 chr17 18832164 18832164 1 + C T UCEC 18832161 + 18832141 18832181 41 TGTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAGGAAA TGTTGACAGCTTTCTTGCTGCAGTAGAGACCCTGAAGGAAA < 41bp 0.700199410683053 0.475143950896306 0.2996688 0.18351287 prediction 0.400398821366106 Functional Loss - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18832161 chr17:18832164 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_99008 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:18832153-18832172
64251 chr1 244218271 244218271 1 + A T OV 244218267 + 244218247 244218287 41 CCCCACATCCTGCAGATCCACCTGAGCACGCACTTCCGCGA CCCCACATCCTGCAGATCCACCTGTGCACGCACTTCCGCGA < 41bp 0.700197483612908 0.378194088430582 0.17392316 0.11888808 prediction 0.400394967225816 Functional Loss - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218267 chr1:244218271 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99009 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:244218252-244218277
64251 chr6 133767844 133767844 1 + G A SKCM 133767841 + 133767821 133767861 41 ATACTCCAGGTAGCTCCAAACTGGAAAAATCTAATCTCAGC ATACTCCAGGTAGCTCCAAACTGAAAAAATCTAATCTCAGC < 41bp 0.780364275699293 0.5801684741132 0.2828981 0.49413297 prediction 0.400391603172185 Functional Loss - EYA4 ENSG00000112319 CDS Human protein_coding chr6:133767841 chr6:133767844 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_99014 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:133767838-133767881
64251 chr4 177250652 177250652 1 + G A rs150623595 177250649 + 177250629 177250669 41 CCCTGGACACCCTTTCTATTCTAGAAAAGGTTTCCCATTTT CCCTGGACACCCTTTCTATTCTAAAAAAGGTTTCCCATTTT < 41bp 0.700194694699634 0.489344607759195 0.14195931 0.055948287 prediction 0.400389389399269 Functional Loss - SPCS3 ENSG00000129128 UTR3 Human protein_coding chr4:177250649 chr4:177250652 . . 0 24 hm5C_associated_SNPs_99016 0 0 7 CSTF2 POSTAR2 GSE37401,GSM917676 chr4:177250622-177250653
64251 chrX 152613396 152613396 1 + C T UCEC 152613394 + 152613374 152613414 41 GGCCGCGTGTTCAAGAGGCGCTCGGCACTGCAGAAGCATCA GGCCGCGTGTTCAAGAGGCGCTTGGCACTGCAGAAGCATCA < 41bp 0.700194025011023 0.456650195752158 0.34712413 0.19813418 prediction 0.400388050022046 Functional Loss - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152613394 chrX:152613396 nonsynonymous SNV 0.988 1 23 hm5C_associated_SNPs_99019 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:152613385-152613407
64251 chr1 22987525 22987525 1 + G A GBM 22987522 + 22987502 22987542 41 ACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGCTT ACCATCAACGTCCCCCTGCGCCGAGACCAGACCATCCGCTT < 41bp 0.700193078549124 0.449561622843204 0.53829455 0.11039743 prediction 0.400386157098248 Functional Loss - C1QB ENSG00000173369 CDS Human protein_coding chr1:22987522 chr1:22987525 synonymous SNV . 0 24 hm5C_associated_SNPs_99020 0 0 1 DGCR8 POSTAR2 ENCODE chr1:22987514-22987553
64251 chr13 115091000 115091000 1 + T C STAD 115090999 + 115090979 115091019 41 CCGGAAGCATGCCCTTTTCCCTGAACTCCCCAAATCTGCTC CCGGAAGCATGCCCTTTTCCCCGAACTCCCCAAATCTGCTC < 41bp 0.827937559447049 0.627752117787923 0.18682373 0.19479278 prediction 0.400370883318251 Functional Loss - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090999 chr13:115091000 synonymous SNV . 0 22 hm5C_associated_SNPs_99027 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:115090976-115091015
64251 chr13 78273056 78273056 1 + G A rs41315030 78273053 + 78273033 78273073 41 CAGTGTTTTCGGAGGGATGACGGGGGATGGTAGGGGTTGGC CAGTGTTTTCGGAGGGATGACGGAGGATGGTAGGGGTTGGC < 41bp 0.700184390745323 0.460349120823002 0.9232352 0.9122492 prediction 0.400368781490646 Functional Loss - SLAIN1 ENSG00000139737 UTR5 Human protein_coding chr13:78273053 chr13:78273056 . . 0 24 hm5C_associated_SNPs_99028 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:78273033-78273060
64251 chr12 109971342 109971342 1 + C T UCEC 109971339 + 109971319 109971359 41 AAGCCTCCATTCTCCATCCGCTGCGTGGAGGTGTCGGACGA AAGCCTCCATTCTCCATCCGCTGTGTGGAGGTGTCGGACGA < 41bp 0.780305598590202 0.580122696675192 0.33631402 0.28909838 prediction 0.400365803830021 Functional Loss - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109971339 chr12:109971342 synonymous SNV . 0 24 hm5C_associated_SNPs_99031 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr12:109971340-109971360
64251 chr1 192778255 192778255 1 + G A LUAD 192778252 + 192778232 192778272 41 CACGACTGCAGACCCATGGACAAGAGCGCAGGCAGTGGCCA CACGACTGCAGACCCATGGACAAAAGCGCAGGCAGTGGCCA < 41bp 0.81600424301503 0.615823787962087 0.21586478 0.13667896 prediction 0.400360910105884 Functional Loss - RGS2 ENSG00000116741 CDS Human protein_coding chr1:192778252 chr1:192778255 synonymous SNV . 0 24 hm5C_associated_SNPs_99033 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:192778255-192778256
64251 chr20 61287939 61287939 1 + C T rs79373363 61287936 + 61287916 61287956 41 CACCCCTGAGCCCCGGCTCCCTCCGCTCCGCTGCCCATAGC CACCCCTGAGCCCCGGCTCCCTCTGCTCCGCTGCCCATAGC < 41bp 0.732017294431647 0.531839560028289 0.080378294 0.16303724 prediction 0.400355468806717 Functional Loss - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61287936 chr20:61287939 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_99039 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61287913-61287948
64251 chr9 4585528 4585528 1 + C T SKCM 4585525 + 4585505 4585545 41 TTTGCAGTAGACAAGTCTGACACCATCTCATTCACCCAGAC TTTGCAGTAGACAAGTCTGACACTATCTCATTCACCCAGAC < 41bp 0.700177378863795 0.487147368574365 0.1298626 0.17966986 prediction 0.400354757727589 Functional Loss - SLC1A1 ENSG00000106688 CDS Human protein_coding chr9:4585525 chr9:4585528 synonymous SNV . 0 24 hm5C_associated_SNPs_99040 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:4585511-4585542
64251 chr16 640428 640428 1 + G T LUAD 640426 + 640406 640446 41 GCAGAGTCCCCGTACGCCTACAGTAACGGTAAGGCCCGGCC GCAGAGTCCCCGTACGCCTACATTAACGGTAAGGCCCGGCC < 41bp 0.700175786313656 0.354865704695833 0.11247271 0.072548 prediction 0.400351572627313 Functional Loss - RAB40C ENSG00000197562 CDS Human protein_coding chr16:640426 chr16:640428 nonsynonymous SNV 0.970 0 23 hm5C_associated_SNPs_99042 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:640409-640430
64251 chr1 151261143 151261143 1 + G T LUAD 151261139 + 151261119 151261159 41 AAGCCAATTTTCAGACCCATCTCCGGGAGGCCTGTCTGCAC AAGCCAATTTTCAGACCCATCTCCTGGAGGCCTGTCTGCAC < 41bp 0.730855025881402 0.530680194577464 0.5392556 0.08034563 prediction 0.400349662607876 Functional Loss - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151261139 chr1:151261143 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_99043 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:151261132-151261153
64251 chr19 10812295 10812295 1 + C T ESCA 10812292 + 10812272 10812312 41 ATGCCAGTGGGCACGCAGGCCACCATGAAGGGCATCACGAC ATGCCAGTGGGCACGCAGGCCACTATGAAGGGCATCACGAC < 41bp 0.744158504415908 0.543985283994911 0.12694335 0.07845101 prediction 0.400346440841994 Functional Loss - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10812292 chr19:10812295 synonymous SNV . 0 24 hm5C_associated_SNPs_99044 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:10812294-10812295
64251 chr7 129351370 129351370 1 + C T UCEC 129351368 + 129351348 129351388 41 GATGCTTCAGAATTGCCAACCACGGTCACCGTTGCCCAAGT GATGCTTCAGAATTGCCAACCATGGTCACCGTTGCCCAAGT < 41bp 0.700159751443518 0.412272943424745 0.29156092 0.25488144 prediction 0.400319502887036 Functional Loss - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129351368 chr7:129351370 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_99050 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:129351357-129351381
64251 chr16 3534905 3534905 1 + G T SARC 3534901 + 3534881 3534921 41 CCCCACCCTTCGGCCGCCCGCAGAGCCCGCCTTCCTGTCCA CCCCACCCTTCGGCCGCCCGCAGATCCCGCCTTCCTGTCCA < 41bp 0.763528179798461 0.563372517826022 0.45368424 0.045694053 prediction 0.400311323944878 Functional Loss - NAA60 ENSG00000122390 CDS Human protein_coding chr16:3534901 chr16:3534905 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_99053 0 0 1 PCBP2 POSTAR2 ENCODE chr16:3534888-3534999
64251 chr3 10130579 10130579 1 + G T UCEC 10130577 + 10130557 10130597 41 GATTGCTGGTGTTGGTGTCCCAGAACTGATCAACTCTCCTA GATTGCTGGTGTTGGTGTCCCATAACTGATCAACTCTCCTA < 41bp 0.7001526053318 0.356915988330309 0.66613925 0.15448242 prediction 0.4003052106636 Functional Loss - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10130577 chr3:10130579 stopgain 0.985 1 23 hm5C_associated_SNPs_99058 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:10130518-10130579
64251 chr16 89980017 89980017 1 + C T rs371146612 89980015 + 89979995 89980035 41 TCACCAGCCGGGCCCTTTTCCACTGAGCCAGAACCCCCCAA TCACCAGCCGGGCCCTTTTCCATTGAGCCAGAACCCCCCAA < 41bp 0.700151062948986 0.485164569920834 0.6334006 0.32822788 prediction 0.400302125897972 Functional Loss - TCF25;MC1R ENSG00000267048 ncRNA_intronic Human processed_transcript chr16:89980015 chr16:89980017 . . 0 23 hm5C_associated_SNPs_99059 0 0 5 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr16:89979999-89980020
64251 chr1 110884085 110884085 1 + C T ESCA 110884082 + 110884062 110884102 41 AGTAGCCGGGATCGTTACAACAGCGACAATGATCGATCTTC AGTAGCCGGGATCGTTACAACAGTGACAATGATCGATCTTC < 41bp 0.718019872927612 0.517869401218226 0.17093727 0.10096735 prediction 0.400300943418773 Functional Loss - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884082 chr1:110884085 synonymous SNV . 0 24 hm5C_associated_SNPs_99060 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:110884063-110884091
64251 chr4 88903735 88903735 1 + T C UCEC 88903734 + 88903714 88903754 41 CCATCCCCGTTGCCCAGGACCTGAACGCGCCTTCTGATTGG CCATCCCCGTTGCCCAGGACCCGAACGCGCCTTCTGATTGG < 41bp 0.827656462372361 0.627506180270734 0.13970643 0.04785174 prediction 0.400300564203254 Functional Loss - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903734 chr4:88903735 nonsynonymous SNV 0.003 3 22 hm5C_associated_SNPs_99061 0 0 3 RPS3 POSTAR2 ENCODE chr4:88903701-88903749
64251 chr12 38710783 38710783 1 + G T KIRC 38710779 + 38710759 38710799 41 CTCCTCTTCTCCGCCTTCAGCCGGGCGCTGCGAGAGCCCTA CTCCTCTTCTCCGCCTTCAGCCGGTCGCTGCGAGAGCCCTA < 41bp 0.700143236460134 0.493706251314407 0.90618885 0.27290487 prediction 0.400286472920268 Functional Loss - ALG10B ENSG00000175548 CDS Human protein_coding chr12:38710779 chr12:38710783 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_99067 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr12:38710763-38710784
64251 chr6 3017156 3017156 1 + G T COAD 3017153 + 3017133 3017173 41 CTTTCCGTAACCACGGGAGGCACGGCCGAGATGTACACGAA CTTTCCGTAACCACGGGAGGCACTGCCGAGATGTACACGAA < 41bp 0.700139213403564 0.29505306316512 0.5707583 0.2647977 prediction 0.400278426807129 Functional Loss - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3017153 chr6:3017156 synonymous SNV . 0 24 hm5C_associated_SNPs_99072 0 0 2 SF3A3 POSTAR2 ENCODE chr6:3017075-3017163
64251 chr19 39207744 39207744 1 + C T UCEC 39207741 + 39207721 39207761 41 CACAGCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTG CACAGCTCCTGGAGTGGATCCGGTGCACCATCCCCTGGCTG < 41bp 0.740431447734205 0.540294374879351 0.8694987 0.7636603 prediction 0.400274145709707 Functional Loss - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39207741 chr19:39207744 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_99074 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39207729-39207765
64251 chr10 102748634 102748634 1 + G A SKCM 102748631 + 102748611 102748651 41 GATTACGAGGCCTGAAGCTCCTAGAGGCTAAATGCCAGGGG GATTACGAGGCCTGAAGCTCCTAAAGGCTAAATGCCAGGGG < 41bp 0.826941052807304 0.626804690139959 0.9189361 0.8789096 prediction 0.40027272533469 Functional Loss - TWNK ENSG00000107815 CDS Human protein_coding chr10:102748631 chr10:102748634 nonsynonymous SNV 0.117 1 24 hm5C_associated_SNPs_99076 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr10:102748624-102748644
64251 chr3 158376774 158376774 1 + A C LUSC 158376773 + 158376753 158376793 41 GGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGAC GGAGAGCTAAAGAAGGGTGACCCCATCTATAACACAAGGAC < 41bp 0.700135324801552 0.449836701214754 0.06806019 0.09556186 prediction 0.400270649603103 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158376773 chr3:158376774 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_99077 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:158376771-158376796
64251 chr3 158376776 158376776 1 + C T SKCM 158376773 + 158376753 158376793 41 GGAGAGCTAAAGAAGGGTGACACCATCTATAACACAAGGAC GGAGAGCTAAAGAAGGGTGACACTATCTATAACACAAGGAC < 41bp 0.700135324801552 0.473043356191316 0.06806019 0.059677064 prediction 0.400270649603103 Functional Loss - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158376773 chr3:158376776 synonymous SNV . 0 24 hm5C_associated_SNPs_99078 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:158376771-158376796
64251 chr1 156024696 156024696 1 + G T SARC 156024692 + 156024672 156024712 41 ACCGTAGGCATGCTGCGCCCCAAGGCTTTGACCCAGGTGCT ACCGTAGGCATGCTGCGCCCCAAGTCTTTGACCCAGGTGCT < 41bp 0.700131713530796 0.485942247376624 0.24733266 0.13000813 prediction 0.400263427061591 Functional Loss - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156024692 chr1:156024696 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_99081 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:156024667-156024718
64251 chr15 66797698 66797698 1 + G T LUSC 66797694 + 66797674 66797714 41 GGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTA GGGATGTGGGAGCGGCTGAACTGCTCAGCAGAGGACTTTTA < 41bp 0.708579038862292 0.508450049746735 0.24747524 0.21483919 prediction 0.400257978231114 Functional Loss - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66797694 chr15:66797698 nonsynonymous SNV 0.002 4 25 hm5C_associated_SNPs_99085 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:66797696-66797720
64251 chr3 180324343 180324343 1 + G T UCS 180324341 + 180324321 180324361 41 TTAGAAAACTGTCCAACTCACAGAAATGCAAGAAAATACCT TTAGAAAACTGTCCAACTCACATAAATGCAAGAAAATACCT < 41bp 0.700123552783714 0.365083570222781 0.29451936 0.10470176 prediction 0.400247105567429 Functional Loss - TTC14 ENSG00000163728 CDS Human protein_coding chr3:180324341 chr3:180324343 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_99088 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:180324340-180324372
64251 chr11 76261122 76261122 1 + G A KIRC 76261119 + 76261099 76261139 41 ATGAGGAGACAGCAATGGAGCAGGACATAGACAGTAGCACG ATGAGGAGACAGCAATGGAGCAGAACATAGACAGTAGCACG < 41bp 0.700123176060579 0.496263583524176 0.37349227 0.15195546 prediction 0.400246352121157 Functional Loss - EMSY ENSG00000158636 CDS Human protein_coding chr11:76261119 chr11:76261122 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_99089 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:76261098-76261124
64251 chr1 109704624 109704624 1 + G T UCEC 109704620 + 109704600 109704640 41 ACCAGCCTGCCTGACCCCATCAAGGGCACCGAGTGCTGTAA ACCAGCCTGCCTGACCCCATCAAGTGCACCGAGTGCTGTAA < 41bp 0.743271919923318 0.543150194296287 0.91346973 0.54269713 prediction 0.400243451254061 Functional Loss - KIAA1324 ENSG00000116299 CDS Human protein_coding chr1:109704620 chr1:109704624 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99091 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585664 chr1:109704620-109704640
64251 chr18 33738800 33738800 1 + A T BLCA 33738798 + 33738778 33738818 41 TATTATATTTTCTATTCTAGCAAGATAGTGATCTTCCAGAA TATTATATTTTCTATTCTAGCATGATAGTGATCTTCCAGAA < 41bp 0.728745179579069 0.528624877008437 0.43283683 0.22620097 prediction 0.400240605141265 Functional Loss - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33738798 chr18:33738800 nonsynonymous SNV 0.083 0 23 hm5C_associated_SNPs_99092 0 0 4 BUD13 POSTAR2 ENCODE chr18:33738790-33738854
64251 chr6 26225632 26225632 1 + C T PRAD 26225629 + 26225609 26225649 41 CTCAGGACTTCAAGACCGACCTGCGCTTCCAGAGTTCCGCG CTCAGGACTTCAAGACCGACCTGTGCTTCCAGAGTTCCGCG < 41bp 0.735918039808841 0.535803688020737 0.17336869 0.12978533 prediction 0.400228703576208 Functional Loss - HIST1H3E ENSG00000196966 CDS Human other chr6:26225629 chr6:26225632 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_99096 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26225598-26225636
64251 chr1 146650404 146650404 1 + G A SKCM 146650401 + 146650381 146650421 41 GCAAAATTAAAAAGTTTATCCAGGAAAACATTTTTGGTATC GCAAAATTAAAAAGTTTATCCAGAAAAACATTTTTGGTATC < 41bp 0.728565901392345 0.528458307815053 0.5645777 0.2632822 prediction 0.400215187154584 Functional Loss - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650401 chr1:146650404 . . 0 24 hm5C_associated_SNPs_99098 0 0 5 WDR33 POSTAR2 GSE61123,GSM1496985 chr1:146650381-146650415
64251 chr1 111690562 111690562 1 + G A STAD 111690559 + 111690539 111690579 41 TGCAAGGGTATTGGGAATGGCTCGTTAGAAGAGTTCCCTCC TGCAAGGGTATTGGGAATGGCTCATTAGAAGAGTTCCCTCC < 41bp 0.803471763597754 0.603373278944717 0.1239796 0.15335047 prediction 0.400196969306074 Functional Loss - CEPT1 ENSG00000134255 CDS Human protein_coding chr1:111690559 chr1:111690562 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_99105 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:111690540-111690566
64251 chr15 39880262 39880262 1 + G A SKCM 39880259 + 39880239 39880279 41 TTAGTTAAACAGGATGGTGGCTGGAGCCACTGGTCCCCGTG TTAGTTAAACAGGATGGTGGCTGAAGCCACTGGTCCCCGTG < 41bp 0.825840050695428 0.625742041250815 0.46974802 0.34978485 prediction 0.400196018889227 Functional Loss - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39880259 chr15:39880262 stopgain 1.000 0 24 hm5C_associated_SNPs_99106 0 0 5 DDX6 POSTAR2 ENCODE chr15:39880242-39880288
64251 chr10 114169344 114169344 1 + G A UCEC 114169341 + 114169321 114169361 41 AATGTAGAGAAAGGCTTCACCCCGAGCCTGAAGGTGATCAT AATGTAGAGAAAGGCTTCACCCCAAGCCTGAAGGTGATCAT < 41bp 0.813582465927291 0.613487336186263 0.2056573 0.09648073 prediction 0.400190259482058 Functional Loss - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114169341 chr10:114169344 synonymous SNV . 0 24 hm5C_associated_SNPs_99108 0 0 3 NOL12 POSTAR2 ENCODE chr10:114169317-114169365
64251 chr18 33557490 33557490 1 + C T rs148863953 33557488 + 33557468 33557508 41 AAGTAAACTCAGCCTGAAGACACCAGAGAGAAGGACTGCAA AAGTAAACTCAGCCTGAAGACATCAGAGAGAAGGACTGCAA < 41bp 0.879570031112968 0.679477306089503 0.17466953 0.15810263 prediction 0.400185450046932 Functional Loss - C18orf21 ENSG00000141428 CDS Human protein_coding chr18:33557488 chr18:33557490 nonsynonymous SNV 0.471 3 23 hm5C_associated_SNPs_99110 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:33557454-33557532
64251 chr16 24166130 24166130 1 + T C rs432998 24166129 + 24166109 24166149 41 GAAGCGGGTGTTGGCCCTGCCTGGGAAGCCGCCCTTCCTGA GAAGCGGGTGTTGGCCCTGCCCGGGAAGCCGCCCTTCCTGA < 41bp 0.821836095161004 0.621745387544024 0.61818534 0.8179487 prediction 0.400181415233961 Functional Loss - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24166129 chr16:24166130 synonymous SNV . 0 22 hm5C_associated_SNPs_99111 0 0 7 DDX24 POSTAR2 ENCODE chr16:24166040-24166179
64251 chr1 37945918 37945918 1 + C T UCEC 37945915 + 37945895 37945935 41 GGGAACAAGGAGGTCTTCTCCTGCCGGGGCATCCTGCTGGC GGGAACAAGGAGGTCTTCTCCTGTCGGGGCATCCTGCTGGC < 41bp 0.769342405425094 0.569257216278366 0.291444 0.14633048 prediction 0.400170378293455 Functional Loss - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37945915 chr1:37945918 synonymous SNV . 0 24 hm5C_associated_SNPs_99119 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:37945907-37945930
64251 chr1 156830838 156830838 1 + G A BLCA 156830835 + 156830815 156830855 41 CTGCGGGCGCCGCACCCTGCCCCGATGCCTGCTGCCCCCAC CTGCGGGCGCCGCACCCTGCCCCAATGCCTGCTGCCCCCAC < 41bp 0.829292524561935 0.629210989527272 0.042135835 0.08351308 prediction 0.400163070069327 Functional Loss - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156830835 chr1:156830838 nonsynonymous SNV 0.785 0 24 hm5C_associated_SNPs_99121 0 0 1 DDX3X POSTAR2 ENCODE chr1:156830645-156830867
64251 chr9 74526670 74526670 1 + A T KIRC 74526668 + 74526648 74526688 41 GCGATGAGCTCCCAGAAAGGCAACGTGGCTCGTTCCAGACC GCGATGAGCTCCCAGAAAGGCATCGTGGCTCGTTCCAGACC < 41bp 0.702172929635419 0.502106245193452 0.22062984 0.14713734 prediction 0.400133368883933 Functional Loss - C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526668 chr9:74526670 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_99129 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:74526644-74526673
64251 chr1 113162482 113162482 1 + G T rs113823236 113162478 + 113162458 113162498 41 CAGCCCAAGATGGCCGACTTCGATGATCGTGTGTCGGATGA CAGCCCAAGATGGCCGACTTCGATTATCGTGTGTCGGATGA < 41bp 0.723701470475889 0.523636194722628 0.35285655 0.11649296 prediction 0.400130551506521 Functional Loss - CAPZA1 ENSG00000116489 CDS Human protein_coding chr1:113162478 chr1:113162482 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99131 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:113162440-113162500
64251 chr19 37975993 37975993 1 + G T UCEC 37975989 + 37975969 37976009 41 GTGGATCCCTTGCCCAACATCAGAGAATTCATACTGGAGAG GTGGATCCCTTGCCCAACATCAGATAATTCATACTGGAGAG < 41bp 0.72437496582645 0.524317254419636 0.7584367 0.24054354 prediction 0.400115422813628 Functional Loss - ZNF570 ENSG00000171827 CDS Human protein_coding chr19:37975989 chr19:37975993 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_99139 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:37975951-37976009
64251 chr20 60701381 60701381 1 + G T LUSC 60701377 + 60701357 60701397 41 CAGTCTTCCCTGGGTTCTGCCTCCGCCTCGCCCTTCCAGCC CAGTCTTCCCTGGGTTCTGCCTCCTCCTCGCCCTTCCAGCC < 41bp 0.720985470874897 0.520933951175329 0.21172094 0.30016392 prediction 0.400103039399136 Functional Loss - LSM14B ENSG00000149657 CDS Human protein_coding chr20:60701377 chr20:60701381 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_99143 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:60701356-60701394
64251 chr17 73512921 73512921 1 + C T BLCA 73512919 + 73512899 73512939 41 TCTGCCCGACGGCTCGGCAGCTCAGGCCGAGCGGCTGCGCC TCTGCCCGACGGCTCGGCAGCTTAGGCCGAGCGGCTGCGCC < 41bp 0.700050003807187 0.450530105795592 0.6675205 0.47614285 prediction 0.400100007614373 Functional Loss - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73512919 chr17:73512921 stopgain 0.472 1 23 hm5C_associated_SNPs_99144 0 0 2 DDX3X POSTAR2 ENCODE chr17:73512900-73513019
64251 chr7 116340025 116340025 1 + T C KIRP 116340024 + 116340004 116340044 41 ATTCCTACATGGAAATGCCTCTGGAGTGTATTCTCACAGAA ATTCCTACATGGAAATGCCTCCGGAGTGTATTCTCACAGAA < 41bp 0.813353562915849 0.613307792546537 0.19447428 0.18618467 prediction 0.400091540738625 Functional Loss - MET ENSG00000105976 CDS Human protein_coding chr7:116340024 chr7:116340025 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_99146 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr7:116340009-116340030
64251 chr4 6925665 6925665 1 + G A UCEC 6925662 + 6925642 6925682 41 GACATCTTGGACCTTGTGGTCACGAGCAGCTCCAGTGCCAT GACATCTTGGACCTTGTGGTCACAAGCAGCTCCAGTGCCAT < 41bp 0.810113994872214 0.61006836208919 0.5443215 0.36192298 prediction 0.400091265566049 Functional Loss - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925662 chr4:6925665 synonymous SNV . 0 24 hm5C_associated_SNPs_99147 0 0 2 GRWD1 POSTAR2 ENCODE chr4:6925505-6925689
64251 chr5 134023944 134023944 1 + G T STAD 134023941 + 134023921 134023961 41 CAATCCATTTCTACGGTCTTCAGGAAAGTCTCTCTCAACCT CAATCCATTTCTACGGTCTTCAGTAAAGTCTCTCTCAACCT < 41bp 0.700043092882919 0.317372525993303 0.34554565 0.08462995 prediction 0.400086185765837 Functional Loss - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134023941 chr5:134023944 stopgain 0.997 1 24 hm5C_associated_SNPs_99148 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:134023900-134023946
64251 chr7 2473231 2473231 1 + C T rs145060306 2473228 + 2473208 2473248 41 ACGGAGAAGCTGGCGCCCTTCAACGAGCACTGGCGGCAGGT ACGGAGAAGCTGGCGCCCTTCAATGAGCACTGGCGGCAGGT < 41bp 0.734138031588352 0.534101044970161 0.28433818 0.27153268 prediction 0.400073973236382 Functional Loss - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473228 chr7:2473231 synonymous SNV . 0 24 hm5C_associated_SNPs_99154 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:2473220-2473240
64251 chr15 91840619 91840619 1 + G A rs181139166 91840616 + 91840596 91840636 41 CTCCAAATTGAGGGTCTTGGCTCGAAGGACAAAAGCCAGAA CTCCAAATTGAGGGTCTTGGCTCAAAGGACAAAAGCCAGAA < 41bp 0.717265164949199 0.517231751221437 0.4463846 0.2501514 prediction 0.400066827455525 Functional Loss - SV2B ENSG00000185518 UTR3 Human protein_coding chr15:91840616 chr15:91840619 . . 0 24 hm5C_associated_SNPs_99158 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr15:91840600-91840620
64251 chr12 119563255 119563255 1 + G A PRAD 119563252 + 119563232 119563272 41 TGCCCCTCGCGGTCCCAGAGCTCGGAGTCCCGCCCCTCAAG TGCCCCTCGCGGTCCCAGAGCTCAGAGTCCCGCCCCTCAAG < 41bp 0.700024135679813 0.430844202947589 0.29863876 0.16856536 prediction 0.400048271359627 Functional Loss - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119563252 chr12:119563255 synonymous SNV . 0 24 hm5C_associated_SNPs_99164 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119563180-119563260
64251 chr7 27187030 27187030 1 - G A LUSC 27187032 - 27187012 27187052 41 CTCCCGAGCAGCAGTACAAACCCGACAGCAGCAGCGGGCAG CTCCCGAGCAGCAGTACAAACCTGACAGCAGCAGCGGGCAG < 41bp 0.852399672636284 0.652376289897045 0.2205635 0.16643158 prediction 0.400046765478479 Functional Loss - HOXA6 ENSG00000106006 CDS Human protein_coding chr7:27187032 chr7:27187030 synonymous SNV . 0 23 hm5C_associated_SNPs_99165 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:27187000-27187040
64251 chr6 73904393 73904393 1 + G T LUAD 73904390 + 73904370 73904410 41 AGATCAACTAGTGCCAACATCTCGAGAGGCCTGCAGTTCAT AGATCAACTAGTGCCAACATCTCTAGAGGCCTGCAGTTCAT < 41bp 0.700021773816504 0.353681716038276 0.9484235 0.93571365 prediction 0.400043547633008 Functional Loss - KCNQ5 ENSG00000185760 CDS Human protein_coding chr6:73904390 chr6:73904393 synonymous SNV . 0 24 hm5C_associated_SNPs_99169 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr6:73904362-73904393
64251 chr6 73904392 73904392 1 + C T SKCM 73904390 + 73904370 73904410 41 AGATCAACTAGTGCCAACATCTCGAGAGGCCTGCAGTTCAT AGATCAACTAGTGCCAACATCTTGAGAGGCCTGCAGTTCAT < 41bp 0.700021773816504 0.421048128265988 0.9484235 0.43567005 prediction 0.400043547633008 Functional Loss - KCNQ5 ENSG00000185760 CDS Human protein_coding chr6:73904390 chr6:73904392 nonsynonymous SNV 0.843 3 23 hm5C_associated_SNPs_99170 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr6:73904362-73904393
64251 chr14 101522564 101522564 1 + G A SKCM 101522561 + 101522541 101522581 41 AGCAGTGCCACCTCATGGTACTCGGAGGGAGGTTGTCCGTG AGCAGTGCCACCTCATGGTACTCAGAGGGAGGTTGTCCGTG < 41bp 0.700018376285966 0.475781933810121 0.13009402 0.02448839 prediction 0.400036752571932 Functional Loss - MIR323B ENSG00000208004 ncRNA_exonic Human miRNA chr14:101522561 chr14:101522564 . . 0 24 hm5C_associated_SNPs_99172 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr14:101522560-101522580
64251 chr19 805125 805125 1 + G A STAD 805122 + 805102 805142 41 TGACAAGAGCCGTGACTACACACGCCCAGACCTGCCTTCCG TGACAAGAGCCGTGACTACACACACCCAGACCTGCCTTCCG < 41bp 0.700016841767805 0.453572911546224 0.022419304 0.0041216016 prediction 0.40003368353561 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:805122 chr19:805125 nonsynonymous SNV 0.331 3 24 hm5C_associated_SNPs_99173 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:805020-805137
64251 chr19 805124 805124 1 + C T UCEC 805122 + 805102 805142 41 TGACAAGAGCCGTGACTACACACGCCCAGACCTGCCTTCCG TGACAAGAGCCGTGACTACACATGCCCAGACCTGCCTTCCG < 41bp 0.700016841767805 0.424641428741834 0.022419304 0.03537458 prediction 0.40003368353561 Functional Loss - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:805122 chr19:805124 nonsynonymous SNV 0.287 4 23 hm5C_associated_SNPs_99174 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:805020-805137
64251 chr16 90028179 90028179 1 + C T BLCA 90028176 + 90028156 90028196 41 AGTGAGGCCAGGCAGTGCGACTACACCGGCCAGTACTACTG AGTGAGGCCAGGCAGTGCGACTATACCGGCCAGTACTACTG < 41bp 0.70001299669863 0.469755591051285 0.8962285 0.8687116 prediction 0.400025993397261 Functional Loss - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90028176 chr16:90028179 synonymous SNV . 0 24 hm5C_associated_SNPs_99176 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:90028179-90028206
64251 chr14 105222017 105222017 1 + G A UCEC 105222014 + 105221994 105222034 41 GGGCCCAGGCCTACCTGGACCACGTGTGGGATGAAGGCTGT GGGCCCAGGCCTACCTGGACCACATGTGGGATGAAGGCTGT < 41bp 0.822188757878132 0.622177487716462 0.29448527 0.30359715 prediction 0.400022540323339 Functional Loss - SIVA1 ENSG00000184990 CDS Human protein_coding chr14:105222014 chr14:105222017 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_99177 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:105221960-105222020
64251 chr8 21844713 21844713 1 + G A LUSC 21844710 + 21844690 21844730 41 CCCAGGCGGGTAATGAGAAGCTAGAGTTGGCCATGCTGAGC CCCAGGCGGGTAATGAGAAGCTAAAGTTGGCCATGCTGAGC < 41bp 0.807311406166569 0.607300323378526 0.4720534 0.327958 prediction 0.400022165576088 Functional Loss - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21844710 chr8:21844713 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_99178 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:21844700-21844720
64251 chr7 5327489 5327489 1 + G A GBM 5327486 + 5327466 5327506 41 CAGCGCCTTGAGGAGCCCAGCGTGGCAGGCACACCAGACCC CAGCGCCTTGAGGAGCCCAGCGTAGCAGGCACACCAGACCC < 41bp 0.700009935412861 0.444392080809719 0.4022532 0.3046124 prediction 0.400019870825722 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5327486 chr7:5327489 synonymous SNV . 0 24 hm5C_associated_SNPs_99181 0 0 3 BUD13 POSTAR2 ENCODE chr7:5327426-5327506
64251 chr7 5327490 5327490 1 + G T LUSC 5327486 + 5327466 5327506 41 CAGCGCCTTGAGGAGCCCAGCGTGGCAGGCACACCAGACCC CAGCGCCTTGAGGAGCCCAGCGTGTCAGGCACACCAGACCC < 41bp 0.700009935412861 0.48136993735521 0.4022532 0.3406765 prediction 0.400019870825722 Functional Loss - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5327486 chr7:5327490 nonsynonymous SNV 0.235 0 25 hm5C_associated_SNPs_99182 0 0 3 BUD13 POSTAR2 ENCODE chr7:5327426-5327506
64251 chr4 3446591 3446591 1 + G T COAD 3446587 + 3446567 3446607 41 TGGGGAACGGCACTGGGTACCGTGGCGTGGCCAGCACCTCA TGGGGAACGGCACTGGGTACCGTGTCGTGGCCAGCACCTCA < 41bp 0.76338035040882 0.563375727266314 0.88258487 0.22317806 prediction 0.400009246285011 Functional Loss - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3446587 chr4:3446591 nonsynonymous SNV 0.194 4 25 hm5C_associated_SNPs_99183 0 0 5 BUD13 POSTAR2 ENCODE chr4:3446572-3446596
64251 chr5 132424155 132424155 1 + G T KIRC 132424153 + 132424133 132424173 41 TGGTGGTGCTACACGAATCCCTGCGGTAAAAGAGAAGATCA TGGTGGTGCTACACGAATCCCTTCGGTAAAAGAGAAGATCA < 41bp 0.700003257904273 0.366166607754682 0.089663535 0.04259166 prediction 0.400006515808545 Functional Loss - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132424153 chr5:132424155 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_99184 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:132424101-132424158
64251 chr7 37960363 37960363 1 + G A UCEC 37960360 + 37960340 37960380 41 CCGGGCCCTGGTCCCGGCTACCGGGACTCGCGCGTCCGGAT CCGGGCCCTGGTCCCGGCTACCGAGACTCGCGCGTCCGGAT < 41bp 0.799840962675858 0.599840850665199 0.91821814 0.85062164 prediction 0.400000224021319 Functional Loss - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960360 chr7:37960363 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_99185 0 0 6 DDX3X POSTAR2 ENCODE chr7:37960311-37960389
64251 chr19 48284382 48284382 1 + C A COAD 48284378 + 48284358 48284398 41 TCCTCAGTGCGGCGAGGGAACTCCCCAGGCCACCGGGTTCT TCCTCAGTGCGGCGAGGGAACTCCACAGGCCACCGGGTTCT < 41bp 0.497094038515782 0.86759939371329 0.32745096 0.95156604 prediction 0.73519878742658 Functional Gain - SELENOW ENSG00000178980 CDS Human protein_coding chr19:48284378 chr19:48284382 synonymous SNV . 0 25 hm5C_associated_SNPs_99188 0 0 5 BUD13 POSTAR2 ENCODE chr19:48284369-48284389
64251 chr3 51978533 51978533 1 + C A COAD 51978529 + 51978509 51978549 41 AGCGGGACCACTTTGTGTCTCACCCGGGCAAGTACACACTT AGCGGGACCACTTTGTGTCTCACCAGGGCAAGTACACACTT < 41bp 0.499436226387155 0.86475625731098 0.24274221 0.84634656 prediction 0.729512514621961 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978529 chr3:51978533 nonsynonymous SNV 0.374 2 25 hm5C_associated_SNPs_99192 0 0 1 GRWD1 POSTAR2 ENCODE chr3:51978469-51978602
64251 chr2 27147881 27147881 1 + C A SKCM 27147877 + 27147857 27147897 41 CCCAAGGTCTGCTGTGATTACGCCCTCCACGTGGGGATCAC CCCAAGGTCTGCTGTGATTACGCCATCCACGTGGGGATCAC < 41bp 0.505387168947449 0.869960754165515 0.23699728 0.48597097 prediction 0.729147170436133 Functional Gain - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27147877 chr2:27147881 nonsynonymous SNV 0.969 4 25 hm5C_associated_SNPs_99194 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27147863-27147913
64251 chr18 72173231 72173231 1 + C A LUSC 72173227 + 72173207 72173247 41 GGCTGGGACAGCGAGCCCTTCACCCTGGTGGAGCGAGACGG GGCTGGGACAGCGAGCCCTTCACCATGGTGGAGCGAGACGG < 41bp 0.495928036349918 0.864237250760593 0.28489125 0.23248833 prediction 0.728474501521187 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72173227 chr18:72173231 nonsynonymous SNV 0.992 1 25 hm5C_associated_SNPs_99195 0 0 3 RPS3 POSTAR2 ENCODE chr18:72173180-72173248
64251 chr14 21458471 21458471 1 + C A UCEC 21458467 + 21458447 21458487 41 AGAAGAGGCCTCATCGCCAGCACCCTGGCATCCTAAAGCTG AGAAGAGGCCTCATCGCCAGCACCATGGCATCCTAAAGCTG < 41bp 0.503447612009242 0.867335852013014 0.120527774 0.17084694 prediction 0.727776480007544 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21458467 chr14:21458471 nonsynonymous SNV 0.616 4 25 hm5C_associated_SNPs_99196 0 0 8 DDX24 POSTAR2 ENCODE chr14:21458413-21458526
64251 chr11 117152789 117152789 1 + C A STAD 117152785 + 117152765 117152805 41 CCAGCCTTCCTCACCCCTTCCTGGCTCCCATGGCAGAAATA CCAGCCTTCCTCACCCCTTCCTGGATCCCATGGCAGAAATA < 41bp 0.499602633601795 0.863217493274041 0.14312363 0.31686783 prediction 0.726434986548081 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152785 chr11:117152789 synonymous SNV . 0 25 hm5C_associated_SNPs_99197 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:117152776-117152828
64251 chr9 131289797 131289797 1 + C A UCEC 131289793 + 131289773 131289813 41 CATCCCAGTGAGCCAAATCTCTACCATTGCAGGTTGGTCAG CATCCCAGTGAGCCAAATCTCTACAATTGCAGGTTGGTCAG < 41bp 0.510919772971945 0.873891238379822 0.17834008 0.5986419 prediction 0.725942930815753 Functional Gain - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131289793 chr9:131289797 synonymous SNV . 0 25 hm5C_associated_SNPs_99198 0 0 6 PRPF8 POSTAR2 ENCODE chr9:131289789-131289848
64251 chr11 45949117 45949117 1 + C A STAD 45949113 + 45949093 45949133 41 TCCTCAGTGACATTGACTTCCTGCCTGCCTATTCTCTCTAC TCCTCAGTGACATTGACTTCCTGCATGCCTATTCTCTCTAC < 41bp 0.493493132124838 0.862672498087225 0.018456519 0.0928154 prediction 0.725344996174451 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949113 chr11:45949117 nonsynonymous SNV 0.988 4 25 hm5C_associated_SNPs_99200 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:45949105-45949130
64251 chr20 30115332 30115332 1 + C A SARC 30115328 + 30115308 30115348 41 ACAATCACCAGCCGGGATGCCGCCCGCTTCCCCATCATCGC ACAATCACCAGCCGGGATGCCGCCAGCTTCCCCATCATCGC < 41bp 0.484413974660626 0.862315957309795 0.15398163 0.39154643 prediction 0.72463191461959 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30115328 chr20:30115332 nonsynonymous SNV 0.963 1 25 hm5C_associated_SNPs_99203 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:30115320-30115340
64251 chr19 54652128 54652128 1 + C A STAD 54652124 + 54652104 54652144 41 CCAGGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGA CCAGGCTGTGGCCCCACCAGCTCCAAGTGGGCCCAGCACGA < 41bp 0.493576905990341 0.861846766994526 0.025624454 0.7995786 prediction 0.723693533989052 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652124 chr19:54652128 synonymous SNV . 0 25 hm5C_associated_SNPs_99205 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:54652120-54652140
64251 chr19 55494060 55494060 1 + C A LUAD 55494056 + 55494036 55494076 41 AGGGTGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCG AGGGTGATGTTACCCAAGGCCGCCATGCTGGTCACCACGCG < 41bp 0.506829522956121 0.868673007274915 0.119861186 0.7485863 prediction 0.723686968637589 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494056 chr19:55494060 nonsynonymous SNV 0.338 4 25 hm5C_associated_SNPs_99206 0 0 3 FMR1 POSTAR2 ENCODE chr19:55494060-55494133
64251 chr1 156702098 156702098 1 + C A UCEC 156702094 + 156702074 156702114 41 TACAGGTCAGTGTGGCCACTCACCCTGCTGGCCCTGAAGTC TACAGGTCAGTGTGGCCACTCACCATGCTGGCCCTGAAGTC < 41bp 0.504767635375301 0.865983160768919 0.04272896 0.10593042 prediction 0.722431050787236 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702094 chr1:156702098 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_99211 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr1:156702080-156702100
64251 chr19 17448978 17448978 1 + C A rs542667981 17448974 + 17448954 17448994 41 TTCTCACAGCACCCCGAGACCTGCCCCTTGCTCGCCACGCC TTCTCACAGCACCCCGAGACCTGCACCTTGCTCGCCACGCC < 41bp 0.495329032592533 0.860095711623273 0.058780044 0.12525007 prediction 0.720191423246547 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17448974 chr19:17448978 nonsynonymous SNV 0.064 4 25 hm5C_associated_SNPs_99221 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr19:17448976-17449000
64251 chr17 43171121 43171121 1 + C A UCEC 43171117 + 43171097 43171137 41 AATATCCGCCAGGAGCCCTACACCCTGCCCCAGGGCTTCAC AATATCCGCCAGGAGCCCTACACCATGCCCCAGGGCTTCAC < 41bp 0.469825271039437 0.859456370721735 0.050466627 0.066907555 prediction 0.718912741443471 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43171117 chr17:43171121 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99228 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:43171115-43171146
64251 chr12 6632078 6632078 1 + C A GBM 6632074 + 6632054 6632094 41 TGTTTGGGGTGCGCCGTATGCTGCCTCTCATCTGGTCTAAG TGTTTGGGGTGCGCCGTATGCTGCATCTCATCTGGTCTAAG < 41bp 0.486579085918287 0.859155276601548 0.35221893 0.45147935 prediction 0.718310553203096 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6632074 chr12:6632078 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99232 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:6632050-6632082
64251 chr19 50910271 50910271 1 + C A UCEC 50910267 + 50910247 50910287 41 ACGACCAGACCCGCCGCCGCCTGGCTGTGTACTGCCTGAAG ACGACCAGACCCGCCGCCGCCTGGATGTGTACTGCCTGAAG < 41bp 0.495207468600586 0.85790749775753 0.120147854 0.5528254 prediction 0.71581499551506 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50910267 chr19:50910271 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_99237 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50910260-50910300
64251 chrX 64722737 64722737 1 + C A UCEC 64722733 + 64722713 64722753 41 GCAACCCCGTGAGGCAAAGACGACCTCCCCTGTGCCGGGAA GCAACCCCGTGAGGCAAAGACGACATCCCCTGTGCCGGGAA < 41bp 0.4979602421065 0.857793151371574 0.17966357 0.14611992 prediction 0.715586302743147 Functional Gain - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64722733 chrX:64722737 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_99241 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64722729-64722749
64251 chrX 153678083 153678083 1 + C A LUSC 153678079 + 153678059 153678099 41 CAAGGAGGACTTGATCATCCCTCACGTGAGTCCCTTCAGCC CAAGGAGGACTTGATCATCCCTCAAGTGAGTCCCTTCAGCC < 41bp 0.503562389630977 0.860815299936994 0.10458323 0.21925846 prediction 0.714505820612034 Functional Gain - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678079 chrX:153678083 nonsynonymous SNV 0.282 1 25 hm5C_associated_SNPs_99244 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:153678083-153678109
64251 chr16 31141854 31141854 1 + C A LIHC 31141850 + 31141830 31141870 41 TCTGACCTGGGCAAGCTCAGCTACCGCAGCTACTGGTCCTG TCTGACCTGGGCAAGCTCAGCTACAGCAGCTACTGGTCCTG < 41bp 0.484753593026648 0.857206888172207 0.22376728 0.8048426 prediction 0.714413776344414 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141850 chr16:31141854 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_99245 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:31141829-31141862
64251 chr19 41094595 41094595 1 + C A MESO 41094591 + 41094571 41094611 41 CGCTTCCGCGGCATGATTTCCACCCAGCCCGGCTCCACCCC CGCTTCCGCGGCATGATTTCCACCAAGCCCGGCTCCACCCC < 41bp 0.524815115009158 0.881593910243754 0.012596607 0.036183894 prediction 0.713557590469193 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41094591 chr19:41094595 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_99250 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:41094570-41094608
64251 chr2 26502071 26502071 1 + C A UCEC 26502067 + 26502047 26502087 41 CTCTGCAGACCGACTGGCCGCTGCCTTTGCTGTTTCTCGGC CTCTGCAGACCGACTGGCCGCTGCATTTGCTGTTTCTCGGC < 41bp 0.519263219063867 0.87594443627508 0.09597275 0.28898704 prediction 0.713362434422426 Functional Gain - HADHB ENSG00000138029 CDS Human protein_coding chr2:26502067 chr2:26502071 synonymous SNV . 0 25 hm5C_associated_SNPs_99251 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr2:26502071-26502072
64251 chr22 29692342 29692342 1 + C A THCA 29692338 + 29692318 29692358 41 AGACCCACCCACTGCCAAGGCTGCCGTGGAATGGTTTGATG AGACCCACCCACTGCCAAGGCTGCAGTGGAATGGTTTGATG < 41bp 0.512426528762489 0.868681241869838 0.14245933 0.14424375 prediction 0.712509426214697 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29692338 chr22:29692342 synonymous SNV . 0 25 hm5C_associated_SNPs_99254 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:29692311-29692347
64251 chr11 125476316 125476316 1 + C A STAD 125476312 + 125476292 125476332 41 GTGGCCTACTGTACTGTTTACTGCCTGGGCACTATACTTTC GTGGCCTACTGTACTGTTTACTGCATGGGCACTATACTTTC < 41bp 0.512800548147884 0.869043816427435 0.055101573 0.30244538 prediction 0.712486536559103 Functional Gain - STT3A ENSG00000134910 CDS Human protein_coding chr11:125476312 chr11:125476316 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99255 0 0 27 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:125476300-125476320
64251 chr11 67352198 67352198 1 + C A SKCM 67352194 + 67352174 67352214 41 AAGTTCCAGGACGGAGACCTCACCCTGTACCAGTCCAATAC AAGTTCCAGGACGGAGACCTCACCATGTACCAGTCCAATAC < 41bp 0.514298350718963 0.870489636904943 0.16740692 0.24128473 prediction 0.71238257237196 Functional Gain - GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67352194 chr11:67352198 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99256 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67352157-67352243
64251 chr3 128973548 128973548 1 + C A UCEC 128973544 + 128973524 128973564 41 ATGACTGGGAAAGAAGACAACTACCGGGGCCCGGCCGTGCG ATGACTGGGAAAGAAGACAACTACAGGGGCCCGGCCGTGCG < 41bp 0.472957717925774 0.85532656279227 0.022619575 0.7802942 prediction 0.71065312558454 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128973544 chr3:128973548 synonymous SNV . 0 25 hm5C_associated_SNPs_99268 0 0 3 BUD13 POSTAR2 ENCODE chr3:128973465-128973586
64251 chr9 135919225 135919225 1 + C A rs150056568 135919221 + 135919201 135919241 41 CCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCTCTA CCCGAGAAGGAGGCCTTTTTCCACAAGGAGCTGCCGCTCTA < 41bp 0.480046974348366 0.855181245041019 0.1984326 0.31640247 prediction 0.710362490082039 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919221 chr9:135919225 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_99270 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:135919213-135919245
64251 chr8 38066683 38066683 1 + C A UCEC 38066679 + 38066659 38066699 41 TTATCCCTGGCCTTCATCAGCGCCCTCAGCACCACCCGGCA TTATCCCTGGCCTTCATCAGCGCCATCAGCACCACCCGGCA < 41bp 0.477622295107766 0.855135327319987 0.25377157 0.25333184 prediction 0.710270654639974 Functional Gain - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38066679 chr8:38066683 synonymous SNV . 0 25 hm5C_associated_SNPs_99271 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:38066659-38066714
64251 chr16 88780174 88780174 1 + C A COAD 88780170 + 88780150 88780190 41 CGTTCCTTCTGTCTTCACACCAGCCGTCGACACCAAGGTGG CGTTCCTTCTGTCTTCACACCAGCAGTCGACACCAAGGTGG < 41bp 0.496660710905461 0.855042696893158 0.081940025 0.09355843 prediction 0.710085393786316 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780170 chr16:88780174 synonymous SNV . 0 25 hm5C_associated_SNPs_99272 0 0 1 DDX24 POSTAR2 ENCODE chr16:88780159-88780180
64251 chr1 151239760 151239760 1 + C A UCEC 151239756 + 151239736 151239776 41 GCCATTCGAAATGCTATGGGCTCCCTGGCCTCCCAGGCCAC GCCATTCGAAATGCTATGGGCTCCATGGCCTCCCAGGCCAC < 41bp 0.478650743441279 0.854505101381649 0.035488605 0.8536605 prediction 0.709010202763298 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151239756 chr1:151239760 nonsynonymous SNV 0.990 3 25 hm5C_associated_SNPs_99277 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:151239728-151239763
64251 chr3 119219634 119219634 1 + C A GBM 119219630 + 119219610 119219650 41 GCTGGGTGTATGGGGGAATACCAGCTTTTATTCATGCTAAA GCTGGGTGTATGGGGGAATACCAGATTTTATTCATGCTAAA < 41bp 0.500952915768669 0.855424727724955 0.33309004 0.5054564 prediction 0.708943623912571 Functional Gain - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119219630 chr3:119219634 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99279 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:119219626-119219654
64251 chr7 5269284 5269284 1 + C A UCEC 5269280 + 5269260 5269300 41 GACCAATGAGATCTTGGACTCTGCCTCTCACGACTGCCCCT GACCAATGAGATCTTGGACTCTGCATCTCACGACTGCCCCT < 41bp 0.510435346281198 0.864757668450207 0.06968632 0.21299633 prediction 0.708644644338018 Functional Gain - WIPI2 ENSG00000157954 CDS Human protein_coding chr7:5269280 chr7:5269284 synonymous SNV . 0 25 hm5C_associated_SNPs_99280 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:5269282-5269303
64251 chr19 30935931 30935931 1 + C A LUAD 30935927 + 30935907 30935947 41 GTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATGCCTCAA GTCCCGGAGGGGGACAAGCACTCCATCCTGGGATGCCTCAA < 41bp 0.530821331977584 0.884924627775962 0.25525334 0.9408933 prediction 0.708206591596755 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935927 chr19:30935931 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_99285 0 0 2 FUS POSTAR2 SRX029328 chr19:30935924-30935952
64251 chr21 43979141 43979141 1 + C A STAD 43979137 + 43979117 43979157 41 ACCCGAACCACGTCGTCATTCTCCCCGGGGACGGTGGGAGT ACCCGAACCACGTCGTCATTCTCCACGGGGACGGTGGGAGT < 41bp 0.464182467565147 0.854100859963802 0.17242593 0.9166002 prediction 0.708201719927605 Functional Gain - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43979137 chr21:43979141 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_99286 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:43979131-43979163
64251 chr11 69462787 69462787 1 + C A LIHC 69462783 + 69462763 69462803 41 TGTGAAGTTCATTTCCAATCCGCCCTCCATGGTGGCAGCGG TGTGAAGTTCATTTCCAATCCGCCATCCATGGTGGCAGCGG < 41bp 0.482144745070986 0.853903675858515 0.05725667 0.35146368 prediction 0.707807351717031 Functional Gain - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69462783 chr11:69462787 synonymous SNV . 0 25 hm5C_associated_SNPs_99290 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:69462758-69462788
64251 chr4 113575287 113575287 1 + C A UCEC 113575283 + 113575263 113575303 41 ATAGACAGGCAAAACTTAATCAGCCTCGGGAAAAGAAAAGA ATAGACAGGCAAAACTTAATCAGCATCGGGAAAAGAAAAGA < 41bp 0.494212840532246 0.853887938481817 0.14744443 0.16763914 prediction 0.707775876963635 Functional Gain - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113575283 chr4:113575287 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99291 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr4:113575274-113575295
64251 chr16 818455 818455 1 + C A LUSC 818451 + 818431 818471 41 TGAAGGCGGAGGAGCGGCACCGCCCGGTGCGGGACTGGATC TGAAGGCGGAGGAGCGGCACCGCCAGGTGCGGGACTGGATC < 41bp 0.496080463573976 0.853713216042334 0.11862144 0.90606874 prediction 0.707426432084669 Functional Gain - MSLN ENSG00000102854 CDS Human protein_coding chr16:818451 chr16:818455 nonsynonymous SNV 0.004 2 25 hm5C_associated_SNPs_99294 0 0 1 SND1 POSTAR2 ENCODE chr16:818407-818545
64251 chr11 63994222 63994222 1 + C A UCEC 63994218 + 63994198 63994238 41 TGAGCCCCGCCCATGACCGTCGCCCACTGCCAGGTGGGGAC TGAGCCCCGCCCATGACCGTCGCCAACTGCCAGGTGGGGAC < 41bp 0.482537628475023 0.853627226646274 0.049702257 0.3994956 prediction 0.707254453292547 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994218 chr11:63994222 nonsynonymous SNV 0.439 1 25 hm5C_associated_SNPs_99296 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:63994222-63994223
64251 chr13 103514654 103514654 1 + C A UCEC 103514650 + 103514630 103514670 41 TGTAGACGAAGGCTCCATATCACCCCGGACTCTTTCAGCCA TGTAGACGAAGGCTCCATATCACCACGGACTCTTTCAGCCA < 41bp 0.517125242077464 0.870671584346444 0.23869336 0.29502097 prediction 0.707092684537961 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514650 chr13:103514654 synonymous SNV . 0 25 hm5C_associated_SNPs_99297 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:103514641-103514666
64251 chr19 4945945 4945945 1 + C A UCEC 4945941 + 4945921 4945961 41 CGGAGCAACGACGGAGCGTACTCCCTAGTCCTGGCGGGGGG CGGAGCAACGACGGAGCGTACTCCATAGTCCTGGCGGGGGG < 41bp 0.477456460693922 0.853529603849615 0.1304718 0.9462006 prediction 0.70705920769923 Functional Gain - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4945941 chr19:4945945 . 0.098 3 25 hm5C_associated_SNPs_99299 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:4945933-4945971
64251 chr6 160819053 160819053 1 + C A OV 160819049 + 160819029 160819069 41 AATGCGTGGATGCTGGACCTCACCCAAGCCATCCTGAACCT AATGCGTGGATGCTGGACCTCACCAAAGCCATCCTGAACCT < 41bp 0.463706633472302 0.853513614447202 0.05337438 0.4749177 prediction 0.707027228894404 Functional Gain - SLC22A3 ENSG00000146477 CDS Human protein_coding chr6:160819049 chr6:160819053 nonsynonymous SNV 0.980 2 25 hm5C_associated_SNPs_99300 0 0 2 BUD13 POSTAR2 ENCODE chr6:160819006-160819097
64251 chr19 38869929 38869929 1 + C A STAD 38869925 + 38869905 38869945 41 ATGCACCAGCTCTTGGGCCTCAACCTCCTCTTCCTGCTGTC ATGCACCAGCTCTTGGGCCTCAACATCCTCTTCCTGCTGTC < 41bp 0.489679381422267 0.853503304197839 0.097905934 0.04524839 prediction 0.707006608395677 Functional Gain - PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38869925 chr19:38869929 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_99301 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:38869895-38869934
64251 chrX 46713151 46713151 1 + C A LUAD 46713147 + 46713127 46713167 41 GATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCG GATTGCAAGTGCACATTAGCCTGCAAACAATTTCGTGTGCG < 41bp 0.515260515423056 0.868563465112157 0.1279619 0.2673181 prediction 0.706605899378202 Functional Gain - RP2 ENSG00000102218 CDS Human protein_coding chrX:46713147 chrX:46713151 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99304 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chrX:46713137-46713163
64251 chr1 32741979 32741979 1 + C A LGG 32741975 + 32741955 32741995 41 TGCACACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCCA TGCACACGGTTGAGCCGCCCCTGCAAGACCCAGAAGCCCCA < 41bp 0.473200328868295 0.852985552143066 0.041584343 0.13986447 prediction 0.705971104286133 Functional Gain - LCK ENSG00000182866 CDS Human protein_coding chr1:32741975 chr1:32741979 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_99308 0 0 1 TARBP2 POSTAR2 GSE55333,GSM1548747 chr1:32741963-32741982
64251 chr12 3390387 3390387 1 + C A UCEC 3390383 + 3390363 3390403 41 GATGCGATGCTGTGGTGTCACTGACTACACAGACTGGTACC GATGCGATGCTGTGGTGTCACTGAATACACAGACTGGTACC < 41bp 0.51139562806815 0.863941574975575 0.026426107 0.07197082 prediction 0.705091893814851 Functional Gain - TSPAN9 ENSG00000011105 CDS Human protein_coding chr12:3390383 chr12:3390387 nonsynonymous SNV 0.695 2 25 hm5C_associated_SNPs_99311 0 0 4 BUD13 POSTAR2 ENCODE chr12:3390308-3390460
64251 chr6 88046794 88046794 1 + C A SKCM 88046790 + 88046770 88046810 41 TCCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAGTTTC TCCAACATTCAAAAAGGAACCACCAAAAGAGAAAGAGTTTC < 41bp 0.512151228498768 0.864605779903837 0.0112020075 0.043556184 prediction 0.704909102810138 Functional Gain - SMIM8 ENSG00000111850;ENSG00000226524 CDS Human other chr6:88046790 chr6:88046794 synonymous SNV . 0 25 hm5C_associated_SNPs_99313 0 0 1 GRWD1 POSTAR2 ENCODE chr6:88046743-88046880
64251 chr17 80680707 80680707 1 + C A LUSC 80680703 + 80680683 80680723 41 GAGGAGGTGGGCAGGAGGAACGGCCCTTTGTGGCCCGGTTT GAGGAGGTGGGCAGGAGGAACGGCACTTTGTGGCCCGGTTT < 41bp 0.499326937947756 0.851937597999771 0.87601805 0.8741534 prediction 0.703875195999542 Functional Gain - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680703 chr17:80680707 nonsynonymous SNV 0.027 0 25 hm5C_associated_SNPs_99328 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80680700-80680736
64251 chr20 32341223 32341223 1 + C A STAD 32341219 + 32341199 32341239 41 ACTGGGGATGCAGCCCTACCCACCCCTAGAGGTGAGCAGAG ACTGGGGATGCAGCCCTACCCACCACTAGAGGTGAGCAGAG < 41bp 0.526649014539888 0.878538554798555 0.15023896 0.2952702 prediction 0.703779080517335 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32341219 chr20:32341223 synonymous SNV . 0 25 hm5C_associated_SNPs_99331 0 0 1 PRPF8 POSTAR2 ENCODE chr20:32341194-32341273
64251 chr19 50912082 50912082 1 + C A UCEC 50912078 + 50912058 50912098 41 ATCGCCACCCTGGACTTCTCCTCGCTGTACCCGTCCATCAT ATCGCCACCCTGGACTTCTCCTCGATGTACCCGTCCATCAT < 41bp 0.531495463761901 0.882945106446535 0.15249625 0.28382155 prediction 0.702899285369267 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50912078 chr19:50912082 nonsynonymous SNV 0.937 4 25 hm5C_associated_SNPs_99337 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50912040-50912120
64251 chr11 67160160 67160160 1 + C A UCEC 67160156 + 67160136 67160176 41 GACGGTGAACTCCTCCCGCTCTGCCTATGCCTGCTTTCTCT GACGGTGAACTCCTCCCGCTCTGCATATGCCTGCTTTCTCT < 41bp 0.473296089693013 0.851182459261263 0.21291807 0.88305616 prediction 0.702364918522525 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160156 chr11:67160160 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_99343 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:67160142-67160164
64251 chr1 32051407 32051407 1 + C A UCEC 32051403 + 32051383 32051423 41 CTATACAAGGGAGGCATCTACAGCCACACGCCAGTGAGCCT CTATACAAGGGAGGCATCTACAGCAACACGCCAGTGAGCCT < 41bp 0.5195186710117 0.870303529273066 0.5537148 0.19227985 prediction 0.701569716522733 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32051403 chr1:32051407 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_99351 0 0 1 LIN28B POSTAR2 ENCODE chr1:32051400-32051472
64251 chr22 31658603 31658603 1 + C A rs575869944 31658599 + 31658579 31658619 41 AGGTGGAGGATGCAATTAGCCAGACGAGCCAGACACTTCAG AGGTGGAGGATGCAATTAGCCAGAAGAGCCAGACACTTCAG < 41bp 0.506346995542716 0.856971979221618 0.53635806 0.63213104 prediction 0.701249967357804 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31658599 chr22:31658603 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_99353 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:31658602-31658603
64251 chr11 93912913 93912913 1 + C A UCEC 93912909 + 93912889 93912929 41 ATTATACTGTTAGCGTGTATCTACCTGGGCTATTACTTCAG ATTATACTGTTAGCGTGTATCTACATGGGCTATTACTTCAG < 41bp 0.527316401804 0.87790976250438 0.12171695 0.9554001 prediction 0.701186721400759 Functional Gain - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93912909 chr11:93912913 nonsynonymous SNV 0.929 4 25 hm5C_associated_SNPs_99355 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:93912906-93912929
64251 chr7 100466340 100466340 1 + C A LUAD 100466336 + 100466316 100466356 41 CCTCTCAGGCCTCTGGGCCCCTCCCGGGCCCCCACTTTCCT CCTCTCAGGCCTCTGGGCCCCTCCAGGGCCCCCACTTTCCT < 41bp 0.474969705875771 0.850589831097566 0.09919143 0.96202993 prediction 0.701179662195133 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466336 chr7:100466340 nonsynonymous SNV 0.075 0 25 hm5C_associated_SNPs_99356 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chr7:100466332-100466362
64251 chr19 7505332 7505332 1 + C A rs28489511 7505328 + 7505308 7505348 41 TCTCTCAGAAAGGGGGTCCCCAGCCAACACCGAGCCCGGCT TCTCTCAGAAAGGGGGTCCCCAGCAAACACCGAGCCCGGCT < 41bp 0.499757333276949 0.850446735651099 0.20941278 0.20038447 prediction 0.700893471302198 Functional Gain - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7505328 chr19:7505332 nonsynonymous SNV 0.974 0 25 hm5C_associated_SNPs_99361 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:7505330-7505355
64251 chr18 12325199 12325199 1 + C A UCEC 12325195 + 12325175 12325215 41 CCTGCAGGGCTTCCAGCTCACGCACTCGCTGGGCGGCGGCA CCTGCAGGGCTTCCAGCTCACGCAATCGCTGGGCGGCGGCA < 41bp 0.498594333443296 0.850362516155632 0.16312078 0.28193504 prediction 0.700725032311263 Functional Gain - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325195 chr18:12325199 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_99364 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:12325183-12325228
64251 chr16 223546 223546 1 + C A HNSC 223542 + 223522 223562 41 TTCACCCCTGCGGTGCACGCCTCCCTGGACAAGTTCCTGGC TTCACCCCTGCGGTGCACGCCTCCATGGACAAGTTCCTGGC < 41bp 0.522426423351312 0.872413906973197 0.33823946 0.9771749 prediction 0.699974967243769 Functional Gain - HBA2 ENSG00000188536 CDS Human protein_coding chr16:223542 chr16:223546 nonsynonymous SNV 0.655 2 25 hm5C_associated_SNPs_99372 0 0 1 DDX55 POSTAR2 ENCODE chr16:223542-223578
64251 chr11 77301379 77301379 1 + C A HNSC 77301375 + 77301355 77301395 41 GATGATGCTGGGGGGCATGTCCCCCGAGACGGGTGCGGTGA GATGATGCTGGGGGGCATGTCCCCAGAGACGGGTGCGGTGA < 41bp 0.515794403597141 0.8657364659717 0.15885517 0.41221023 prediction 0.699884124749117 Functional Gain - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301375 chr11:77301379 synonymous SNV . 0 25 hm5C_associated_SNPs_99374 0 0 3 DDX3X POSTAR2 ENCODE chr11:77301368-77301391
64251 chr19 33183180 33183180 1 + C A LUSC 33183176 + 33183156 33183196 41 GCCGCACCGCTTTCCCGTCGCTGCCCGACACCGATGACCAC GCCGCACCGCTTTCCCGTCGCTGCACGACACCGATGACCAC < 41bp 0.493082676432417 0.849940490733527 0.05382371 0.23286763 prediction 0.699880981467054 Functional Gain - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33183176 chr19:33183180 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_99375 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr19:33183120-33183180
64251 chr19 6750381 6750381 1 + C A rs28705365 6750377 + 6750357 6750397 41 AGCCGGCACGCCCGGCCTCCCGACCCCCCCGCTAGCGCCCC AGCCGGCACGCCCGGCCTCCCGACACCCCCGCTAGCGCCCC < 41bp 0.519210510760717 0.868986384284936 0.109831125 0.08341485 prediction 0.699551747048439 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750377 chr19:6750381 nonsynonymous SNV 0.796 2 25 hm5C_associated_SNPs_99380 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6750368-6750404
64251 chr19 45570793 45570793 1 + C A rs75895703 45570789 + 45570769 45570809 41 CAGCCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAGCTGA CAGCCAGAGCCCCTCGCCATCACCAGCAAGAGAGAAGCTGA < 41bp 0.478252314013558 0.849527767920596 0.047388107 0.15165451 prediction 0.699055535841193 Functional Gain - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45570789 chr19:45570793 synonymous SNV . 0 25 hm5C_associated_SNPs_99384 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:45570793-45570794
64251 chr7 148481139 148481139 1 + C A CESC 148481135 + 148481115 148481155 41 CCAGTAAATCCCCTGAGTTGCTGGCTCGATACTGTGACTCC CCAGTAAATCCCCTGAGTTGCTGGATCGATACTGTGACTCC < 41bp 0.522335820866555 0.871858236819312 0.32995212 0.6408501 prediction 0.699044831905514 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148481135 chr7:148481139 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_99385 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:148481109-148481161
64251 chr5 134229242 134229242 1 + C A UCEC 134229238 + 134229218 134229258 41 TGTACTCTAGTCCTGTTTTACACCCCGTGGTGCCGCTTTTC TGTACTCTAGTCCTGTTTTACACCACGTGGTGCCGCTTTTC < 41bp 0.474092874012985 0.849498660453379 0.07351199 0.08199057 prediction 0.698997320906758 Functional Gain - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229238 chr5:134229242 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_99386 0 0 4 EWSR1 POSTAR2 SRX029344 chr5:134229219-134229244
64251 chr8 22865620 22865620 1 - G T KIRC 22865624 - 22865604 22865644 41 CTTTGTGTCCTCAGCCTTACCTCCCGGGTGGAGCTCTCCAC CTTTGTGTCCTCAGCCTTACCTCCAGGGTGGAGCTCTCCAC < 41bp 0.491716787968308 0.84888591281648 0.08451706 0.9328195 prediction 0.69777182563296 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865624 chr8:22865620 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_99398 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:22865573-22865630
64251 chr3 30713916 30713916 1 + C A STAD 30713912 + 30713892 30713932 41 CTACTCTGTCTGTGGATGACCTGGCTAACAGTGGGCAGGTA CTACTCTGTCTGTGGATGACCTGGATAACAGTGGGCAGGTA < 41bp 0.482792620137466 0.8488729859668 0.42632163 0.43113306 prediction 0.697745971933601 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713912 chr3:30713916 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_99399 0 0 2 GRWD1 POSTAR2 ENCODE chr3:30713830-30713930
64251 chr14 21961331 21961331 1 + C A STAD 21961327 + 21961307 21961347 41 CTGTGGAAAGTAGTCCTGAGCGGCCTATGAACAACAGCCCT CTGTGGAAAGTAGTCCTGAGCGGCATATGAACAACAGCCCT < 41bp 0.514085490355639 0.862829365567156 0.47067094 0.62947625 prediction 0.697487750423033 Functional Gain - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961327 chr14:21961331 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_99402 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:21961323-21961346
64251 chr20 45362402 45362402 1 + C A UCEC 45362398 + 45362378 45362418 41 CATTCTTTGTCTGACAGGTTCACCCTGAGCTTTGGCCACAG CATTCTTTGTCTGACAGGTTCACCATGAGCTTTGGCCACAG < 41bp 0.489497479033528 0.848526193963045 0.017740846 0.02176094 prediction 0.69705238792609 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45362398 chr20:45362402 nonsynonymous SNV 0.373 1 25 hm5C_associated_SNPs_99405 0 0 1 SND1 POSTAR2 ENCODE chr20:45362401-45362438
64251 chr15 39874401 39874401 1 + C A rs59086883 39874397 + 39874377 39874417 41 TCTCTCCTGTCTAACAGAGTCTGGCGGAGACAACAGCGTGT TCTCTCCTGTCTAACAGAGTCTGGAGGAGACAACAGCGTGT < 41bp 0.515633832831717 0.864152972689984 0.37658563 0.28324014 prediction 0.697038279716534 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874397 chr15:39874401 synonymous SNV . 0 25 hm5C_associated_SNPs_99408 0 0 2 EFTUD2 POSTAR2 ENCODE chr15:39874390-39874448
64251 chr19 50881931 50881931 1 + C A UCEC 50881927 + 50881907 50881947 41 CCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGG CCTGGTGGATCTGAGGCAGGCAGCAAGGGCTCCGGGGAAGG < 41bp 0.503377383060125 0.851716131887835 0.57887954 0.5716017 prediction 0.696677497655419 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881927 chr19:50881931 nonsynonymous SNV 0.577 2 25 hm5C_associated_SNPs_99412 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr19:50881923-50881944
64251 chr1 156702836 156702836 1 + C A LUAD 156702832 + 156702812 156702852 41 CCAGGTTGTAGACGTGGGCTCAGGCCAGGTGAGCCAGAGTC CCAGGTTGTAGACGTGGGCTCAGGACAGGTGAGCCAGAGTC < 41bp 0.494445235737171 0.847985416017756 0.8052292 0.87866026 prediction 0.695970832035513 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156702832 chr1:156702836 synonymous SNV . 0 25 hm5C_associated_SNPs_99417 0 0 2 BUD13 POSTAR2 ENCODE chr1:156702799-156702841
64251 chr11 71906977 71906977 1 + C A TGCT 71906973 + 71906953 71906993 41 GCGCAGTGGGAGCTGCCTGCCAACCTTTCCATTTCTACTTC GCGCAGTGGGAGCTGCCTGCCAACATTTCCATTTCTACTTC < 41bp 0.509005230772935 0.856698637731236 0.010038197 0.008513302 prediction 0.695386813916603 Functional Gain - FOLR1 ENSG00000110195 CDS Human protein_coding chr11:71906973 chr11:71906977 nonsynonymous SNV 0.011 0 25 hm5C_associated_SNPs_99427 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:71906971-71907005
64251 chr12 122255151 122255151 1 + C A rs191488950 122255147 + 122255127 122255167 41 GCCACCAGACACCACCTCATCTGGCGACCAGAAGCGGCTGC GCCACCAGACACCACCTCATCTGGAGACCAGAAGCGGCTGC < 41bp 0.51676357534077 0.864412668506444 0.23490185 0.21765605 prediction 0.695298186331347 Functional Gain - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122255147 chr12:122255151 synonymous SNV . 0 25 hm5C_associated_SNPs_99430 0 0 2 FXR2 POSTAR2 ENCODE chr12:122255111-122255187
64251 chr6 33383399 33383399 1 + C A COAD 33383395 + 33383375 33383415 41 TCCGGATGTTTGCTTCCTTCCACCCTTCTGCCAGCACCGCA TCCGGATGTTTGCTTCCTTCCACCATTCTGCCAGCACCGCA < 41bp 0.527326249008986 0.87492066288259 0.037181765 0.056743264 prediction 0.695188827747208 Functional Gain - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33383395 chr6:33383399 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_99431 0 0 6 GRWD1 POSTAR2 ENCODE chr6:33383394-33383440
64251 chr22 24124604 24124604 1 + C A TGCT 24124600 + 24124580 24124620 41 ACCCGGCGTGTAGACAGTCCCGTGCCCCGCAGGGCCACTGA ACCCGGCGTGTAGACAGTCCCGTGACCCGCAGGGCCACTGA < 41bp 0.509696368574194 0.857280723059024 0.08493197 0.33131272 prediction 0.695168708969661 Functional Gain - MMP11 ENSG00000099953;ENSG00000267954 CDS Human other chr22:24124600 chr22:24124604 nonsynonymous SNV 0.958 4 25 hm5C_associated_SNPs_99432 0 0 1 SND1 POSTAR2 ENCODE chr22:24124533-24124645
64251 chr16 67203550 67203550 1 + C A rs35750776 67203546 + 67203526 67203566 41 TCTCCTAGGGAAGGACCCCACGCTCGGGGCCCCACTCCTGC TCTCCTAGGGAAGGACCCCACGCTAGGGGCCCCACTCCTGC < 41bp 0.490388890833964 0.847380545423717 0.016349167 0.07606688 prediction 0.694761090847434 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67203546 chr16:67203550 synonymous SNV . 0 25 hm5C_associated_SNPs_99436 0 0 1 RBFOX2 POSTAR2 ENCODE chr16:67203525-67203554
64251 chr7 100276231 100276231 1 + C A LGG 100276227 + 100276207 100276247 41 ATCTGGGATGCCATGAAGGGCGACCGTGCAGGTGACAGCTG ATCTGGGATGCCATGAAGGGCGACAGTGCAGGTGACAGCTG < 41bp 0.490553692197195 0.847338364421279 0.30709785 0.30334055 prediction 0.694676728842559 Functional Gain - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100276227 chr7:100276231 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99439 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:100276204-100276235
64251 chr1 148932835 148932835 1 + C A LUAD 148932831 + 148932811 148932851 41 CCCGCCAGGCCTCCATAGAGCTGCCCAGCATGGCTGCATCC CCCGCCAGGCCTCCATAGAGCTGCACAGCATGGCTGCATCC < 41bp 0.510599252204029 0.857839001534468 0.091608256 0.08935475 prediction 0.694479498660879 Functional Gain - LOC645166 ENSG00000232527 ncRNA_exonic Human lincRNA chr1:148932831 chr1:148932835 . . 0 25 hm5C_associated_SNPs_99443 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:148932805-148932854
64251 chrX 75649385 75649385 1 + T G COAD 75649382 + 75649362 75649402 41 ACTCCCGGTGAGGGACCAAGCACTTCCGTACTGCCAATCCC ACTCCCGGTGAGGGACCAAGCACGTCCGTACTGCCAATCCC < 41bp 0.504840982090662 0.852014966330912 0.2191213 0.31423923 prediction 0.694347968480499 Functional Gain - MAGEE1 ENSG00000198934 CDS Human protein_coding chrX:75649382 chrX:75649385 synonymous SNV . 0 24 hm5C_associated_SNPs_99445 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:75649380-75649400
64251 chr4 74277725 74277725 1 + C A LUAD 74277721 + 74277701 74277741 41 TTTTCTTTTTAGGGCAGTAGCTCGCCTGAGCCAGAGATTTC TTTTCTTTTTAGGGCAGTAGCTCGACTGAGCCAGAGATTTC < 41bp 0.489038428077847 0.84711940809893 0.023806304 0.3085668 prediction 0.69423881619786 Functional Gain - ALB ENSG00000163631 CDS Human protein_coding chr4:74277721 chr4:74277725 synonymous SNV . 0 25 hm5C_associated_SNPs_99446 0 0 6 DHX30 POSTAR2 ENCODE chr4:74277711-74277733
64251 chr17 66518980 66518980 1 + C A HNSC 66518976 + 66518956 66518996 41 GGATGAGATTTCTCCTCCTCCACCCAACCCAGTGGTTAAAG GGATGAGATTTCTCCTCCTCCACCAAACCCAGTGGTTAAAG < 41bp 0.455264329572143 0.847075194057663 0.122143924 0.1555439 prediction 0.694150388115326 Functional Gain - PRKAR1A ENSG00000108946 CDS Human protein_coding chr17:66518976 chr17:66518980 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_99449 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:66518960-66518980
64251 chr6 26458895 26458895 1 + C A ESCA 26458891 + 26458871 26458911 41 TCAGCTGCTGCCCTGCACTTCTCCCGGCCAGCCTCCCTCCT TCAGCTGCTGCCCTGCACTTCTCCAGGCCAGCCTCCCTCCT < 41bp 0.468128875034845 0.847053172100856 0.35736358 0.9378215 prediction 0.694106344201711 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26458891 chr6:26458895 synonymous SNV . 0 25 hm5C_associated_SNPs_99450 0 0 1 GRWD1 POSTAR2 ENCODE chr6:26458836-26458912
64251 chr11 62495908 62495908 1 + C A UCEC 62495904 + 62495884 62495924 41 TTTAGCACTAGTCCCGCCCACTCCCTTCTACTTCCAGGTCG TTTAGCACTAGTCCCGCCCACTCCATTCTACTTCCAGGTCG < 41bp 0.519524856116883 0.866391235520627 0.0494453 0.92641664 prediction 0.693732758807487 Functional Gain - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62495904 chr11:62495908 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_99455 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:62495888-62495920
64251 chr16 30779808 30779808 1 + C A HNSC 30779804 + 30779784 30779824 41 AAGGCCAAGGTGGAAGAAACCAAGCGGAAGGAATCAGAACT AAGGCCAAGGTGGAAGAAACCAAGAGGAAGGAATCAGAACT < 41bp 0.489701341048376 0.846865932947449 0.6658757 0.879099 prediction 0.693731865894899 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30779804 chr16:30779808 synonymous SNV . 0 25 hm5C_associated_SNPs_99456 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:30779768-30779815
64251 chr5 175717358 175717358 1 + C A OV 175717354 + 175717334 175717374 41 ATGCCCTCGGCAGAATATCCCAGGCCCACCTCAAGACTCTC ATGCCCTCGGCAGAATATCCCAGGACCACCTCAAGACTCTC < 41bp 0.498548050701823 0.846858603424978 0.72069585 0.69640005 prediction 0.693717206849956 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175717354 chr5:175717358 synonymous SNV . 0 25 hm5C_associated_SNPs_99458 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:175717346-175717368
64251 chr9 112900226 112900226 1 + C A PAAD 112900222 + 112900202 112900242 41 TTGATGACCCCTTGGAGTATCAGGCTGGCCTCCTGGTGCAG TTGATGACCCCTTGGAGTATCAGGATGGCCTCCTGGTGCAG < 41bp 0.503565167458207 0.85026292057894 0.9144281 0.93322754 prediction 0.693395506241465 Functional Gain - AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 CDS Human other chr9:112900222 chr9:112900226 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99460 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr9:112900221-112900240
64251 chr18 77798522 77798522 1 + C A OV 77798518 + 77798498 77798538 41 GTCTCAGGTTTCCCTGACTCCAGACTTCTCAGCCTGCCGAG GTCTCAGGTTTCCCTGACTCCAGAATTCTCAGCCTGCCGAG < 41bp 0.487397636526132 0.846678630450972 0.67304707 0.48348418 prediction 0.693357260901944 Functional Gain - RBFA ENSG00000101546 CDS Human protein_coding chr18:77798518 chr18:77798522 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99461 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:77798508-77798544
64251 chr1 224377867 224377867 1 + C A BLCA 224377863 + 224377843 224377883 41 CTTTACTTGGCCTGGGTTTGCACCCAATTTCTGGACATTTT CTTTACTTGGCCTGGGTTTGCACCAAATTTCTGGACATTTT < 41bp 0.482425379294971 0.846226982728269 0.21174386 0.18538779 prediction 0.692453965456538 Functional Gain - DEGS1 ENSG00000143753 CDS Human protein_coding chr1:224377863 chr1:224377867 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_99472 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:224377862-224377887
64251 chr8 125580690 125580690 1 - G T SARC 125580694 - 125580674 125580714 41 TATTGGAAGAAACAGAAAAGCAGGCTGTCCGGAAGGCTTTG TATTGGAAGAAACAGAAAAGCAGGATGTCCGGAAGGCTTTG < 41bp 0.485676965126769 0.846142691007278 0.86371225 0.86062276 prediction 0.692285382014556 Functional Gain - MTSS1 ENSG00000170873 CDS Human protein_coding chr8:125580694 chr8:125580690 nonsynonymous SNV 0.859 4 25 hm5C_associated_SNPs_99475 0 0 2 GRWD1 POSTAR2 ENCODE chr8:125580617-125580762
64251 chr19 2917947 2917947 1 + C A rs142727006 2917943 + 2917923 2917963 41 TTAGAGAACATGTGAGAATTCACACGCAAGAGCAGCTCCAT TTAGAGAACATGTGAGAATTCACAAGCAAGAGCAGCTCCAT < 41bp 0.517063057575665 0.863201907579177 0.12177652 0.17168722 prediction 0.692277700007024 Functional Gain - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917943 chr19:2917947 nonsynonymous SNV 0.009 2 25 hm5C_associated_SNPs_99476 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:2917947-2917948
64251 chr16 28997985 28997985 1 + C A UCEC 28997981 + 28997961 28998001 41 TGTGTCGTTACCCCCAGAACCAGCCTGTGAGGATGCGGATG TGTGTCGTTACCCCCAGAACCAGCATGTGAGGATGCGGATG < 41bp 0.521912406214102 0.86779758829528 0.16008195 0.28667438 prediction 0.691770364162354 Functional Gain - LAT ENSG00000213658 CDS Human protein_coding chr16:28997981 chr16:28997985 synonymous SNV . 0 25 hm5C_associated_SNPs_99480 0 0 6 BUD13 POSTAR2 ENCODE chr16:28997949-28998013
64251 chr19 54653390 54653390 1 + C A UCEC 54653386 + 54653366 54653406 41 GACCCAGCCTCCTGGTGCCACTGCCTGTGAATCCTCCCAGC GACCCAGCCTCCTGGTGCCACTGCATGTGAATCCTCCCAGC < 41bp 0.462041841609673 0.84544665125167 0.13278154 0.12313968 prediction 0.690893302503341 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54653386 chr19:54653390 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_99490 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54653379-54653417
64251 chr4 110754440 110754440 1 + C A STAD 110754436 + 110754416 110754456 41 CATTGGCTATCCCATGTCTGCTGCCTCAGATCTGTATGGAA CATTGGCTATCCCATGTCTGCTGCATCAGATCTGTATGGAA < 41bp 0.474191828433652 0.845281688591983 0.058793217 0.07250011 prediction 0.690563377183966 Functional Gain - RRH ENSG00000180245 CDS Human protein_coding chr4:110754436 chr4:110754440 synonymous SNV . 0 25 hm5C_associated_SNPs_99493 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr4:110754420-110754440
64251 chr1 221053223 221053223 1 + C A STAD 221053219 + 221053199 221053239 41 GATGTTCGCAGCCGGGCTGGCTCCCTTCTACGCCTCCAACT GATGTTCGCAGCCGGGCTGGCTCCATTCTACGCCTCCAACT < 41bp 0.516842808179627 0.862056277842531 0.010954827 0.21802136 prediction 0.690426939325808 Functional Gain - HLX ENSG00000136630 CDS Human protein_coding chr1:221053219 chr1:221053223 synonymous SNV . 0 25 hm5C_associated_SNPs_99495 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:221053206-221053230
64251 chr14 101200700 101200700 1 + C A LUSC 101200696 + 101200676 101200716 41 GGCTTCATCGACAAGACCTGCAGCCGCCCGGTGACCAACTG GGCTTCATCGACAAGACCTGCAGCAGCCCGGTGACCAACTG < 41bp 0.512773497364025 0.857973797212406 0.19563219 0.2604733 prediction 0.690400599696763 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200696 chr14:101200700 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_99497 0 0 10 DDX3X POSTAR2 ENCODE chr14:101200650-101200752
64251 chr19 36637199 36637199 1 + C A OV 36637195 + 36637175 36637215 41 AACTTCATCAGCTGCTTGGTCAGGCTGGACGCCATGTTCCG AACTTCATCAGCTGCTTGGTCAGGATGGACGCCATGTTCCG < 41bp 0.487863847934759 0.844848120157063 0.39271852 0.35110095 prediction 0.689696240314127 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36637195 chr19:36637199 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99502 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:36637172-36637204
64251 chr1 28176927 28176927 1 + C A rs191813798 28176923 + 28176903 28176943 41 ATATGCAAAAGAGGCTTGGCCAGGCAAGAAGCCCACACCTT ATATGCAAAAGAGGCTTGGCCAGGAAAGAAGCCCACACCTT < 41bp 0.500776816234073 0.845624627912945 0.7876872 0.55981666 prediction 0.689695623357744 Functional Gain - PPP1R8 ENSG00000117751 CDS Human protein_coding chr1:28176923 chr1:28176927 synonymous SNV . 0 25 hm5C_associated_SNPs_99504 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:28176913-28176951
64251 chr1 28862784 28862784 1 + C A rs182979681 28862780 + 28862760 28862800 41 GGCCTTTCCCCCAGGAACTCCGGGCACAGAATCTTGCTTCA GGCCTTTCCCCCAGGAACTCCGGGAACAGAATCTTGCTTCA < 41bp 0.472557892710426 0.844604881568809 0.76695216 0.8861176 prediction 0.689209763137617 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28862780 chr1:28862784 synonymous SNV . 0 25 hm5C_associated_SNPs_99510 0 0 15 LIN28B POSTAR2 GSE44616,GSM1087851 chr1:28862774-28862795
64251 chr16 67000757 67000757 1 + C A UCEC 67000753 + 67000733 67000773 41 GTCAACAACCATGAGTTCAGCTGGCTCATCCCCAGGGTGAG GTCAACAACCATGAGTTCAGCTGGATCATCCCCAGGGTGAG < 41bp 0.480145117676189 0.844434017747378 0.4213917 0.35161495 prediction 0.688868035494755 Functional Gain - CES3 ENSG00000172828 CDS Human protein_coding chr16:67000753 chr16:67000757 nonsynonymous SNV 0.022 0 25 hm5C_associated_SNPs_99513 0 0 1 PRPF8 POSTAR2 ENCODE chr16:67000754-67000806
64251 chr2 177036368 177036368 1 + C A HNSC 177036364 + 177036344 177036384 41 ACTTCAACCGCTACTTGTGCCGGCCGCGCCGCGTGGAGATG ACTTCAACCGCTACTTGTGCCGGCAGCGCCGCGTGGAGATG < 41bp 0.48854288222453 0.844422273375987 0.46820766 0.8228525 prediction 0.688844546751974 Functional Gain - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177036364 chr2:177036368 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_99514 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:177036335-177036373
64251 chr22 32215120 32215120 1 + C A THCA 32215116 + 32215096 32215136 41 TGTTCGACCTGGTGGATACACGCCCCAGAGAGCACTGATTA TGTTCGACCTGGTGGATACACGCCACAGAGAGCACTGATTA < 41bp 0.517219608709376 0.861608323382266 0.20483801 0.10521704 prediction 0.688777429345781 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32215116 chr22:32215120 synonymous SNV . 0 25 hm5C_associated_SNPs_99515 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:32215101-32215125
64251 chr16 89704574 89704574 1 + T G LUAD 89704571 + 89704551 89704591 41 GGGCTTCCAGCCTCCATCGCCACTGGGGGCTCCTGCTGGCC GGGCTTCCAGCCTCCATCGCCACGGGGGGCTCCTGCTGGCC < 41bp 0.487926754784198 0.844228101395945 0.92386806 0.95496035 prediction 0.688456202791891 Functional Gain - DPEP1 ENSG00000015413 CDS Human protein_coding chr16:89704571 chr16:89704574 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_99518 0 0 2 LARP4 POSTAR2 ENCODE chr16:89704544-89704692
64251 chr10 133761150 133761150 1 + T G UCEC 133761147 + 133761127 133761167 41 ACATGATGACCAGAGACTACCTGTCGGTGAAGGTGTGGGAC ACATGATGACCAGAGACTACCTGGCGGTGAAGGTGTGGGAC < 41bp 0.506103261573152 0.850157614289299 0.047614425 0.40487415 prediction 0.688108705432294 Functional Gain - PPP2R2D ENSG00000175470 CDS Human protein_coding chr10:133761147 chr10:133761150 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_99526 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:133761116-133761162
64251 chr5 167919806 167919806 1 + C A GBM 167919802 + 167919782 167919822 41 TGCTAGTGACACCAAGTCAGCAGGCCAAGTTTGGGGACTAT TGCTAGTGACACCAAGTCAGCAGGACAAGTTTGGGGACTAT < 41bp 0.510306511822036 0.854352847869883 0.5520785 0.49553382 prediction 0.688092672095693 Functional Gain - RARS ENSG00000113643 CDS Human protein_coding chr5:167919802 chr5:167919806 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_99527 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:167919789-167919836
64251 chr14 101200790 101200790 1 + C A LUAD 101200786 + 101200766 101200806 41 GTGAGCTACGAGTGTCTGTGCAAGCCCGAGTTCACAGGTCT GTGAGCTACGAGTGTCTGTGCAAGACCGAGTTCACAGGTCT < 41bp 0.494747186779205 0.843928940803112 0.54215217 0.71817124 prediction 0.687857881606225 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200786 chr14:101200790 nonsynonymous SNV 0.975 2 25 hm5C_associated_SNPs_99530 0 0 5 RPS3 POSTAR2 ENCODE chr14:101200785-101200923
64251 chr16 67876877 67876877 1 + C A UCEC 67876873 + 67876853 67876893 41 GTCCTCACCCTCTGCCTCCACTGCCCAGACTGCCCAGCTGC GTCCTCACCCTCTGCCTCCACTGCACAGACTGCCCAGCTGC < 41bp 0.477160863944613 0.843818501100195 0.0405474 0.059081256 prediction 0.68763700220039 Functional Gain - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67876873 chr16:67876877 synonymous SNV . 0 25 hm5C_associated_SNPs_99539 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:67876853-67876883
64251 chr5 177019627 177019627 1 + C A UCEC 177019623 + 177019603 177019643 41 AGCAGCGGGAGGAGTACCAGCCGGCCACCCCGGGGCTTGGC AGCAGCGGGAGGAGTACCAGCCGGACACCCCGGGGCTTGGC < 41bp 0.481947018619876 0.84380334575698 0.80121803 0.8182544 prediction 0.687606691513961 Functional Gain - TMED9 ENSG00000184840 CDS Human protein_coding chr5:177019623 chr5:177019627 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_99541 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:177019576-177019634
64251 chr11 118499199 118499199 1 + C A STAD 118499195 + 118499175 118499215 41 TCTCTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCA TCTCTTACTGGGGCTTCACCCTGCAAGAGTCCCTGTGTCCA < 41bp 0.51980895665612 0.863578487796086 0.19484332 0.3734924 prediction 0.687539062279931 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118499195 chr11:118499199 nonsynonymous SNV 0.741 1 25 hm5C_associated_SNPs_99544 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:118499178-118499216
64251 chr22 45689190 45689190 1 + C A LGG 45689186 + 45689166 45689206 41 TTTGCTGGCGCCATTGCCCTCAGCCTCGTGTAAGTACCTGC TTTGCTGGCGCCATTGCCCTCAGCATCGTGTAAGTACCTGC < 41bp 0.476901231226412 0.843678482151813 0.3538819 0.3480846 prediction 0.687356964303626 Functional Gain - UPK3A ENSG00000100373 CDS Human protein_coding chr22:45689186 chr22:45689190 nonsynonymous SNV 0.139 0 25 hm5C_associated_SNPs_99548 0 0 1 LARP4 POSTAR2 ENCODE chr22:45689144-45689195
64251 chr13 113973791 113973791 1 + C A CESC 113973787 + 113973767 113973807 41 CTCCACTGCACCTGCAGAGACACGCTGTGAACAAGACAGGC CTCCACTGCACCTGCAGAGACACGATGTGAACAAGACAGGC < 41bp 0.474340881364854 0.843677391404254 0.08400276 0.20387363 prediction 0.687354782808508 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113973787 chr13:113973791 synonymous SNV . 0 25 hm5C_associated_SNPs_99549 0 0 5 RPS3 POSTAR2 ENCODE chr13:113973789-113973873
64251 chr19 16338459 16338459 1 + C A rs143380976 16338455 + 16338435 16338475 41 CCGCACCATCTCCTTCATCCCACCCGACGGCGAGTTCGAGC CCGCACCATCTCCTTCATCCCACCAGACGGCGAGTTCGAGC < 41bp 0.455425882909564 0.843647504101066 0.034637988 0.029158294 prediction 0.687295008202132 Functional Gain - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338455 chr19:16338459 synonymous SNV . 0 25 hm5C_associated_SNPs_99552 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:16338433-16338460
64251 chr6 52268714 52268714 1 + T G ESCA 52268711 + 52268691 52268731 41 CTGTGGCACACCGTGTGGCGCTCTGTCACCTGGCTGGCTGC CTGTGGCACACCGTGTGGCGCTCGGTCACCTGGCTGGCTGC < 41bp 0.510834634002029 0.854473112171689 0.06790325 0.2903301 prediction 0.687276956339321 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268711 chr6:52268714 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_99553 0 0 1 YBX3 POSTAR2 ENCODE chr6:52268687-52268758
64251 chr17 61613156 61613156 1 + C A LUSC 61613152 + 61613132 61613172 41 TTCTTGCTCATGTGCACCTTCGCGCTCATAGCGCACTGGCT TTCTTGCTCATGTGCACCTTCGCGATCATAGCGCACTGGCT < 41bp 0.461386154007934 0.843616112127826 0.55783564 0.3955868 prediction 0.687232224255651 Functional Gain - KCNH6 ENSG00000173826 CDS Human protein_coding chr17:61613152 chr17:61613156 nonsynonymous SNV 0.924 5 25 hm5C_associated_SNPs_99554 0 0 1 RBM15 POSTAR2 ENCODE chr17:61613146-61613196
64251 chr16 89985918 89985918 1 + C A rs1805006 89985914 + 89985894 89985934 41 CATCTGCTGCCTGGCCTTGTCGGACCTGCTGGTGAGCGGGA CATCTGCTGCCTGGCCTTGTCGGAACTGCTGGTGAGCGGGA < 41bp 0.489021952370521 0.843498566753344 0.31993443 0.66173285 prediction 0.686997133506688 Functional Gain - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89985914 chr16:89985918 nonsynonymous SNV 0.816 4 25 hm5C_associated_SNPs_99558 3 1 2 EIF3H POSTAR2 ENCODE chr16:89985902-89985960
64251 chr15 40675159 40675159 1 + C A LUAD 40675155 + 40675135 40675175 41 GTTTCTATTTGAAACCCAGGCGGCCGACTTAGCCGGTGGCA GTTTCTATTTGAAACCCAGGCGGCAGACTTAGCCGGTGGCA < 41bp 0.515107239933333 0.85860433303178 0.6756644 0.8047209 prediction 0.686994186196894 Functional Gain - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40675155 chr15:40675159 synonymous SNV . 0 25 hm5C_associated_SNPs_99559 0 0 1 DDX3X POSTAR2 ENCODE chr15:40675149-40675247
64251 chr11 126146096 126146096 1 + C A STAD 126146092 + 126146072 126146112 41 GCACCCTGCAGGGCACCAAGCTACCTGTGGAGCCGAGGAAA GCACCCTGCAGGGCACCAAGCTACATGTGGAGCCGAGGAAA < 41bp 0.541985045280327 0.885301213710026 0.29188487 0.62017363 prediction 0.686632336859399 Functional Gain - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146092 chr11:126146096 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_99561 0 0 11 EIF3H POSTAR2 ENCODE chr11:126146017-126146123
64251 chr21 40871822 40871822 1 + C A SKCM 40871818 + 40871798 40871838 41 GCAGTGAAGATGTGGGCAACCTCCCTGAAGCCCAGGAGAAG GCAGTGAAGATGTGGGCAACCTCCATGAAGCCCAGGAGAAG < 41bp 0.54363301341359 0.886846995415773 0.06476024 0.94371855 prediction 0.686427964004366 Functional Gain - SH3BGR;WRB-SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40871818 chr21:40871822 nonsynonymous SNV 0.009 0 25 hm5C_associated_SNPs_99567 0 0 3 TRA2A POSTAR2 ENCODE chr21:40871789-40871841
64251 chr8 144457821 144457821 1 + C A rs144295575 144457817 + 144457797 144457837 41 CAAGGAGCTGCAGATGCGGACGGGCGCTGAGAACCTCTACA CAAGGAGCTGCAGATGCGGACGGGAGCTGAGAACCTCTACA < 41bp 0.490552322838083 0.843186933212071 0.5728619 0.86929506 prediction 0.686373866424142 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144457817 chr8:144457821 synonymous SNV . 0 25 hm5C_associated_SNPs_99569 0 0 1 EFTUD2 POSTAR2 ENCODE chr8:144457806-144457917
64251 chr9 140508526 140508526 1 + C A KIRP 140508522 + 140508502 140508542 41 GCCACCAAGAAGTTCTCCTACAAGCTGGTGAAGACGGGCAG GCCACCAAGAAGTTCTCCTACAAGATGGTGAAGACGGGCAG < 41bp 0.502221290490868 0.845299006629754 0.48488128 0.36886984 prediction 0.686155432277773 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508522 chr9:140508526 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99574 0 0 2 GRWD1 POSTAR2 ENCODE chr9:140508489-140508548
64251 chr11 129306690 129306690 1 + C A ACC 129306686 + 129306666 129306706 41 TATCCGCTCCTCTCGGTGATCACCCGCCAGCCCACTGTCAT TATCCGCTCCTCTCGGTGATCACCAGCCAGCCCACTGTCAT < 41bp 0.527737693923967 0.870746756321207 0.0908761 0.260654 prediction 0.686018124794481 Functional Gain - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129306686 chr11:129306690 nonsynonymous SNV 0.983 3 25 hm5C_associated_SNPs_99578 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:129306652-129306690
64251 chr2 228680244 228680244 1 + C A HNSC 228680240 + 228680220 228680260 41 CCTAAATTTATTGTGGGCTTCACACGGCAGCTGGCCAATGA CCTAAATTTATTGTGGGCTTCACAAGGCAGCTGGCCAATGA < 41bp 0.475689177396464 0.842971835236239 0.052043825 0.22409192 prediction 0.685943670472477 Functional Gain - CCL20 ENSG00000115009 CDS Human protein_coding chr2:228680240 chr2:228680244 synonymous SNV . 0 25 hm5C_associated_SNPs_99579 0 0 5 DDX6 POSTAR2 ENCODE chr2:228680241-228680248
64251 chr16 28965898 28965898 1 + C A LUSC 28965894 + 28965874 28965914 41 CTCTGCCCCCAGAGGCAGAGCTGGCAGATTCGAGTGGTCTC CTCTGCCCCCAGAGGCAGAGCTGGAAGATTCGAGTGGTCTC < 41bp 0.482109196448096 0.842963409622631 0.2608731 0.27080083 prediction 0.685926819245262 Functional Gain - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28965894 chr16:28965898 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_99580 0 0 9 BUD13 POSTAR2 ENCODE chr16:28965850-28965907
64251 chr16 2257253 2257253 1 + C A STAD 2257249 + 2257229 2257269 41 CCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTGA CCACATCTGGGACTTGAAAACAGAACACAACGAGCAGCTGA < 41bp 0.5082132298242 0.851095672186551 0.34757254 0.2929676 prediction 0.685764884724703 Functional Gain - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2257249 chr16:2257253 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99582 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:2257251-2257279
64251 chr22 29446450 29446450 1 + C A UCEC 29446446 + 29446426 29446466 41 GGAAGCTCCCAGGGCTTGTACGGCCTTCACCCCGACCATTT GGAAGCTCCCAGGGCTTGTACGGCATTCACCCCGACCATTT < 41bp 0.520090024935352 0.862875501607821 0.5173655 0.42843962 prediction 0.685570953344939 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29446446 chr22:29446450 nonsynonymous SNV 0.660 0 25 hm5C_associated_SNPs_99586 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29446430-29446459
64251 chr16 30594036 30594036 1 - G T TGCT 30594040 - 30594020 30594060 41 AAAGGCTTCAAGCGCAAGACCGCCCTGGAAGCCCATCGGTG AAAGGCTTCAAGCGCAAGACCGCCATGGAAGCCCATCGGTG < 41bp 0.521508621565264 0.864240733962908 0.07666582 0.5127368 prediction 0.685464224795289 Functional Gain - ZNF785 ENSG00000197162 CDS Human protein_coding chr16:30594040 chr16:30594036 nonsynonymous SNV 0.009 2 25 hm5C_associated_SNPs_99588 0 0 1 RBM15 POSTAR2 ENCODE chr16:30594033-30594068
64251 chr7 29923497 29923497 1 + C A STAD 29923493 + 29923473 29923513 41 GACAGGGCAGGGCCCTGGCTCCCGCGCGCCCTCTCCCAGGC GACAGGGCAGGGCCCTGGCTCCCGAGCGCCCTCTCCCAGGC < 41bp 0.534075837629614 0.876653644096741 0.07407355 0.08475974 prediction 0.685155612934254 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29923493 chr7:29923497 synonymous SNV . 0 25 hm5C_associated_SNPs_99598 0 0 2 SF3B4 POSTAR2 ENCODE chr7:29923420-29923499
64251 chrX 15568067 15568067 1 + C A LUAD 15568063 + 15568043 15568083 41 TCCCAGGGCCACAGGCTTTACCGGCCCCACCTGGCATCGGA TCCCAGGGCCACAGGCTTTACCGGACCCACCTGGCATCGGA < 41bp 0.51743082061693 0.859938250115818 0.30381277 0.5544623 prediction 0.685014858997777 Functional Gain - BMX ENSG00000102010 CDS Human protein_coding chrX:15568063 chrX:15568067 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_99600 0 0 2 DDX3X POSTAR2 ENCODE chrX:15567989-15568103
64251 chr17 42428520 42428520 1 + C A COAD 42428516 + 42428496 42428536 41 CCACGGACCTCCTCACTAAGCTGCCTGCGCACACAGGTACC CCACGGACCTCCTCACTAAGCTGCATGCGCACACAGGTACC < 41bp 0.463327482982299 0.842468520823497 0.26768076 0.26598263 prediction 0.684937041646993 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42428516 chr17:42428520 nonsynonymous SNV 0.032 3 25 hm5C_associated_SNPs_99605 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:42428501-42428524
64251 chr10 112760217 112760217 1 + C A UCEC 112760213 + 112760193 112760233 41 CGTCTTGGTCTGAGATATAACAGACTGTCAGCAATACCCAG CGTCTTGGTCTGAGATATAACAGAATGTCAGCAATACCCAG < 41bp 0.487847541632627 0.842420173289669 0.41267383 0.34469444 prediction 0.684840346579338 Functional Gain - SHOC2 ENSG00000108061 CDS Human protein_coding chr10:112760213 chr10:112760217 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_99607 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:112760189-112760244
64251 chrX 47045565 47045565 1 + C A UCEC 47045561 + 47045541 47045581 41 GAAGTACGGCGGCATATCCACAGCCTCTGTGTGAGTGGCTG GAAGTACGGCGGCATATCCACAGCATCTGTGTGAGTGGCTG < 41bp 0.48390464209691 0.842341573891099 0.40379918 0.33765888 prediction 0.684683147782198 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47045561 chrX:47045565 synonymous SNV . 0 25 hm5C_associated_SNPs_99609 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:47045545-47045569
64251 chr20 44422598 44422598 1 + C A UCEC 44422594 + 44422574 44422614 41 CCATCTCCATGGATCTCCTCCGAGCTGTCCTGCAGCCCAGC CCATCTCCATGGATCTCCTCCGAGATGTCCTGCAGCCCAGC < 41bp 0.527993913675473 0.870327957441405 0.507576 0.53040886 prediction 0.684668087531864 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44422594 chr20:44422598 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_99611 0 0 2 BUD13 POSTAR2 ENCODE chr20:44422550-44422607
64251 chr1 180217446 180217446 1 + C A LUAD 180217442 + 180217422 180217462 41 ATTCCCCAGTGCGCTGGCTGCAACCAGCACATCCTGGACAA ATTCCCCAGTGCGCTGGCTGCAACAAGCACATCCTGGACAA < 41bp 0.465107162947467 0.842173870904089 0.02599001 0.089550555 prediction 0.684347741808178 Functional Gain - LHX4 ENSG00000121454 CDS Human protein_coding chr1:180217442 chr1:180217446 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_99617 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:180217419-180217457
64251 chr2 183943850 183943850 1 + C A BRCA 183943846 + 183943826 183943866 41 TTATGTGCAGGACCTTAGCTCGGACCTGCAAGTTGGCGTTA TTATGTGCAGGACCTTAGCTCGGAACTGCAAGTTGGCGTTA < 41bp 0.504144829590501 0.846272874837604 0.8794687 0.8870342 prediction 0.684256090494205 Functional Gain - DUSP19 ENSG00000162999 CDS Human protein_coding chr2:183943846 chr2:183943850 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_99618 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:183943843-183943880
64251 chr1 100964777 100964777 1 + C A READ 100964773 + 100964753 100964793 41 ATCCTCCGACCCTCCTACACCGGGCTTTCTTCTTCTTCAGC ATCCTCCGACCCTCCTACACCGGGATTTCTTCTTCTTCAGC < 41bp 0.509702430192274 0.85177805250451 0.5635501 0.8341048 prediction 0.684151244624473 Functional Gain - CDC14A ENSG00000079335 CDS Human protein_coding chr1:100964773 chr1:100964777 nonsynonymous SNV 0.580 3 25 hm5C_associated_SNPs_99620 0 0 2 YBX3 POSTAR2 ENCODE chr1:100964685-100964807
64251 chr19 55897974 55897974 1 + T G COAD 55897971 + 55897951 55897991 41 TGAAGGCCCGCAATTCCTTCCGCTACAACGGACTGATTCAC TGAAGGCCCGCAATTCCTTCCGCGACAACGGACTGATTCAC < 41bp 0.497817111503278 0.842034759189188 0.25765654 0.2809406 prediction 0.684069518378377 Functional Gain - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55897971 chr19:55897974 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_99621 0 0 53 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:55897938-55898056
64251 chr2 42557309 42557309 1 + C A BRCA 42557305 + 42557285 42557325 41 AGCAAGGAGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCA AGCAAGGAGCAGGCCAAAGCCACCATTCTGGAGGACCAGCA < 41bp 0.464570849454102 0.841938105129258 0.1435456 0.2510413 prediction 0.683876210258516 Functional Gain - EML4 ENSG00000143924 CDS Human protein_coding chr2:42557305 chr2:42557309 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_99623 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:42557301-42557324
64251 chr14 52186845 52186845 1 + C A PAAD 52186841 + 52186821 52186861 41 ACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGC ACATGGACCAGCTGGAAAAACGGTAGCGGGCCAGCGGGAGC < 41bp 0.522533953111256 0.86437336347757 0.15027729 0.17489633 prediction 0.683678820732627 Functional Gain - FRMD6 ENSG00000139926 CDS Human protein_coding chr14:52186841 chr14:52186845 stopgain 0.301 1 25 hm5C_associated_SNPs_99627 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr14:52186839-52186869
64251 chr5 36677139 36677139 1 + T G SKCM 36677136 + 36677116 36677156 41 GCTGGTCCCAGTTCCAGGATCTGTGAATGGAGTCAATGCCC GCTGGTCCCAGTTCCAGGATCTGGGAATGGAGTCAATGCCC < 41bp 0.484119006043107 0.841838308428251 0.28092614 0.6904826 prediction 0.683676616856502 Functional Gain - SLC1A3 ENSG00000079215 CDS Human protein_coding chr5:36677136 chr5:36677139 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_99628 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr5:36677132-36677170
64251 chr22 25019761 25019761 1 + C A rs185947660 25019757 + 25019737 25019777 41 GATCAACCAGGGTACAACTTCTCCCGGGAGAGCGTGGAGAG GATCAACCAGGGTACAACTTCTCCAGGGAGAGCGTGGAGAG < 41bp 0.546594192150053 0.888384290424121 0.17464536 0.899613 prediction 0.683580196548135 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25019757 chr22:25019761 synonymous SNV . 0 25 hm5C_associated_SNPs_99631 0 0 2 BUD13 POSTAR2 ENCODE chr22:25019738-25019790
64251 chr11 66290971 66290971 1 + C A STAD 66290967 + 66290947 66290987 41 ACTGCATCGAGCTGAGCGCCCAGCCTGTGGGACTTATCCGG ACTGCATCGAGCTGAGCGCCCAGCATGTGGGACTTATCCGG < 41bp 0.46950540741432 0.841571588486975 0.13137218 0.12876555 prediction 0.683143176973951 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66290967 chr11:66290971 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99638 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:66290937-66290984
64251 chr17 16340127 16340127 1 + C A UCEC 16340123 + 16340103 16340143 41 GAACTCTCGAGAACCCTGTCCTGGCTTCCCCTCCCAAGGAG GAACTCTCGAGAACCCTGTCCTGGATTCCCCTCCCAAGGAG < 41bp 0.490104976778994 0.841502956648139 0.18554547 0.27961063 prediction 0.683005913296278 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16340123 chr17:16340127 nonsynonymous SNV 0.004 2 25 hm5C_associated_SNPs_99643 0 0 1 BUD13 POSTAR2 ENCODE chr17:16340098-16340143
64251 chr17 32954018 32954018 1 + T G BLCA 32954015 + 32953995 32954035 41 GGGAAGTGCTCAGCATCCTCCTCTATCTGGCCCCCAACTCC GGGAAGTGCTCAGCATCCTCCTCGATCTGGCCCCCAACTCC < 41bp 0.501964586611501 0.843450961027324 0.9301021 0.6771018 prediction 0.682972748831647 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32954015 chr17:32954018 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_99644 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:32954018-32954019
64251 chr17 78092544 78092544 1 + C A UCEC 78092540 + 78092520 78092560 41 TGTCCTGGGCGTGGCCACGGCGCCCCAGCAGGTCCTCTCCA TGTCCTGGGCGTGGCCACGGCGCCACAGCAGGTCCTCTCCA < 41bp 0.458753692973149 0.841468195874996 0.6706013 0.84351814 prediction 0.682936391749992 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78092540 chr17:78092544 synonymous SNV . 0 25 hm5C_associated_SNPs_99645 0 0 2 LARP4 POSTAR2 ENCODE chr17:78092463-78092559
64251 chr17 74382561 74382561 1 + C A LUSC 74382557 + 74382537 74382577 41 CTCCCAGCAGGCTCTGGCAACGCGCTGGCAGCTTCCTTGAA CTCCCAGCAGGCTCTGGCAACGCGATGGCAGCTTCCTTGAA < 41bp 0.527525741823898 0.868932423233635 0.08952063 0.2732793 prediction 0.682813362819474 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382557 chr17:74382561 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_99646 0 0 3 BUD13 POSTAR2 ENCODE chr17:74382467-74382565
64251 chrX 48545194 48545194 1 + T G GBM 48545191 + 48545171 48545211 41 CCCTCCAGTGGGTCCGCTCTCCCTGGGGCTGGCGACAGTGG CCCTCCAGTGGGTCCGCTCTCCCGGGGGCTGGCGACAGTGG < 41bp 0.478959737475459 0.841144456111482 0.12025702 0.9303484 prediction 0.682288912222964 Functional Gain - WAS ENSG00000015285 CDS Human protein_coding chrX:48545191 chrX:48545194 nonsynonymous SNV 0.623 3 24 hm5C_associated_SNPs_99655 0 0 1 RPS3 POSTAR2 ENCODE chrX:48545169-48545228
64251 chr10 12131081 12131081 1 + T G rs3740015 12131078 + 12131058 12131098 41 ACCTGACCTCCTCTGTGGACCTGTACTTTGGGGCGCACCAT ACCTGACCTCCTCTGTGGACCTGGACTTTGGGGCGCACCAT < 41bp 0.48267598297003 0.841138229290382 0.6682426 0.90452653 prediction 0.682276458580765 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12131078 chr10:12131081 nonsynonymous SNV 0.934 0 24 hm5C_associated_SNPs_99656 0 0 2 BUD13 POSTAR2 ENCODE chr10:12131070-12131181
64251 chr10 103912207 103912207 1 + C A OV 103912203 + 103912183 103912223 41 ATTCGCCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCT ATTCGCCGCGTGGTTCCCAGCGACATGTATCCCCTCGTGCT < 41bp 0.490429725153082 0.840916452878446 0.10713163 0.24240214 prediction 0.681832905756891 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103912203 chr10:103912207 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_99659 0 0 37 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:103912140-103912240
64251 chr7 94293250 94293250 1 + C A LUSC 94293246 + 94293226 94293266 41 TTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGGC TTCGTGACAAGCATGATGACCGGCAGTGCTGCCCGTTGGGC < 41bp 0.469068299521264 0.840834597162289 0.32833898 0.38527644 prediction 0.681669194324579 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293246 chr7:94293250 nonsynonymous SNV 0.949 3 25 hm5C_associated_SNPs_99664 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:94293243-94293265
64251 chrX 77378707 77378707 1 + T G UCEC 77378704 + 77378684 77378724 41 CTGTGTAGATTGGCACTTCTCTGTTTGATGAAGAGGGAGCC CTGTGTAGATTGGCACTTCTCTGGTTGATGAAGAGGGAGCC < 41bp 0.495045530479647 0.840656891752374 0.03525114 0.1283746 prediction 0.681313783504748 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378704 chrX:77378707 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_99673 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:77378700-77378720
64251 chr20 43561020 43561020 1 + T G rs556015963 43561017 + 43560997 43561037 41 TGCATACTATGGCTGTGGCCCAGTGACACCCACCCAGCCTG TGCATACTATGGCTGTGGCCCAGGGACACCCACCCAGCCTG < 41bp 0.479357788356341 0.840573899620763 0.35129267 0.9328369 prediction 0.681147799241525 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43561017 chr20:43561020 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_99680 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:43560991-43561031
64251 chr6 46623671 46623671 1 + C A PRAD 46623667 + 46623647 46623687 41 GGGAGACGGTGCAAGAGAATCTGCCCCCTATAGGGGAATGG GGGAGACGGTGCAAGAGAATCTGCACCCTATAGGGGAATGG < 41bp 0.514828292881219 0.854909231592261 0.22385791 0.31326708 prediction 0.680161877422083 Functional Gain - SLC25A27 ENSG00000153291 CDS Human protein_coding chr6:46623667 chr6:46623671 synonymous SNV . 0 25 hm5C_associated_SNPs_99698 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:46623655-46623679
64251 chrX 70824111 70824111 1 + T G STAD 70824108 + 70824088 70824128 41 GATTCGGATGTTCCCGATGACAATAGTGATGATTTGGAAGT GATTCGGATGTTCCCGATGACAAGAGTGATGATTTGGAAGT < 41bp 0.50491822462572 0.844950583788373 0.2096189 0.46589708 prediction 0.680064718325307 Functional Gain - GCNA ENSG00000147174 CDS Human protein_coding chrX:70824108 chrX:70824111 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_99702 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:70824097-70824145
64251 chr8 23147827 23147827 1 + C A rs150268828 23147823 + 23147803 23147843 41 GGAGACATGGTGGAGATGGCCACACGGTTTGGGTCCACCCT GGAGACATGGTGGAGATGGCCACAAGGTTTGGGTCCACCCT < 41bp 0.470411638710429 0.83992742286599 0.61229736 0.33823276 prediction 0.67985484573198 Functional Gain - R3HCC1 ENSG00000104679 CDS Human protein_coding chr8:23147823 chr8:23147827 synonymous SNV . 0 25 hm5C_associated_SNPs_99707 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr8:23147821-23147844
64251 chr22 31667167 31667167 1 + C A PRAD 31667163 + 31667143 31667183 41 ATCATCCACCGGGATCTGAACTCGCACAACTGCCTCATCAA ATCATCCACCGGGATCTGAACTCGAACAACTGCCTCATCAA < 41bp 0.438406790809898 0.839674884491421 0.6494405 0.8835846 prediction 0.679349768982841 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31667163 chr22:31667167 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99719 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:31667145-31667169
64251 chr17 48174888 48174888 1 + C A rs35550088 48174884 + 48174864 48174904 41 AAAGAGATCAACCTGCTTCCCGACCGAGTGCTGAGCACACC AAAGAGATCAACCTGCTTCCCGACAGAGTGCTGAGCACACC < 41bp 0.533068555052807 0.872636279315719 0.10282099 0.041104496 prediction 0.679135448525824 Functional Gain - PDK2 ENSG00000005882 CDS Human protein_coding chr17:48174884 chr17:48174888 synonymous SNV . 0 25 hm5C_associated_SNPs_99726 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:48174860-48174898
64251 chrX 120181962 120181962 1 + C A COAD 120181958 + 120181938 120181978 41 GGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAA GGCTACCGGGCCCAGCACAGCCAGAACCGCACGCCCTGCAA < 41bp 0.505262357551127 0.844808876654183 0.097266465 0.27576768 prediction 0.67909303820611 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120181958 chrX:120181962 nonsynonymous SNV 0.951 2 25 hm5C_associated_SNPs_99727 0 0 2 RPS3 POSTAR2 ENCODE chrX:120181887-120181981
64251 chr12 7054995 7054995 1 + C A COAD 7054991 + 7054971 7055011 41 AGCCCAGGATCCTGAGATCGCCAGCCTGTCAGGCAAGCTGA AGCCCAGGATCCTGAGATCGCCAGACTGTCAGGCAAGCTGA < 41bp 0.499720815238846 0.839446557968678 0.55235463 0.89382654 prediction 0.678893115937355 Functional Gain - C12orf57 ENSG00000111678 CDS Human protein_coding chr12:7054991 chr12:7054995 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_99731 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7054976-7055010
64251 chr6 116600879 116600879 1 - G T LUSC 116600883 - 116600863 116600903 41 CACCAGTACCTGAGGCTCCGCGACCAAAGCGAGGCGACACA CACCAGTACCTGAGGCTCCGCGACAAAAGCGAGGCGACACA < 41bp 0.500831294797722 0.840096038321781 0.05083731 0.10541606 prediction 0.678529487048118 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600883 chr6:116600879 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_99737 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:116600860-116600880
64251 chr11 46403911 46403911 1 + C A BLCA 46403907 + 46403887 46403927 41 GGCCTGGGGGCCCTGCACCCCCAGCAGCAAGGATTGCGGCG GGCCTGGGGGCCCTGCACCCCCAGAAGCAAGGATTGCGGCG < 41bp 0.50100590981387 0.840234098956917 0.13660428 0.117753625 prediction 0.678456378286094 Functional Gain - MDK ENSG00000110492 CDS Human protein_coding chr11:46403907 chr11:46403911 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_99738 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:46403900-46403940
64251 chr11 70281279 70281279 1 + C A rs199842991 70281275 + 70281255 70281295 41 AGCTGCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCG AGCTGCGGCAGTAGGGCCCCCAGCACCCCCCCGGAGCTGCG < 41bp 0.506670099259512 0.845871745858421 0.27324682 0.21521574 prediction 0.678403293197817 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281275 chr11:70281279 . . 0 25 hm5C_associated_SNPs_99739 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr1 10535052 10535052 1 + C A rs12068754 10535048 + 10535028 10535068 41 CGTCCTCGGAGCAGGCAGAGCAGCCGAGCCAGGTAAGGGGA CGTCCTCGGAGCAGGCAGAGCAGCAGAGCCAGGTAAGGGGA < 41bp 0.513752501581113 0.852820332247131 0.8998524 0.90415615 prediction 0.678135661332036 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10535048 chr1:10535052 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99745 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:10535042-10535076
64251 chr20 31604886 31604886 1 + T G SKCM 31604883 + 31604863 31604903 41 TCCAACCTGGTGCAGGGTGTCAATGTCCACCTGGGCACCTT TCCAACCTGGTGCAGGGTGTCAAGGTCCACCTGGGCACCTT < 41bp 0.478217667329286 0.839016569958871 0.045594454 0.8683338 prediction 0.678033139917741 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31604883 chr20:31604886 nonsynonymous SNV 0.509 4 24 hm5C_associated_SNPs_99748 0 0 2 PPIG POSTAR2 ENCODE chr20:31604858-31604900
64251 chr1 236902635 236902635 1 + C A LUAD 236902631 + 236902611 236902651 41 TGGATTCGTCGCACGATCCCCTGGCTGGAGAACCGGACTCC TGGATTCGTCGCACGATCCCCTGGATGGAGAACCGGACTCC < 41bp 0.465431522409105 0.838897345886255 0.13630834 0.45451257 prediction 0.67779469177251 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236902631 chr1:236902635 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_99756 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:236902623-236902661
64251 chr4 95539204 95539204 1 + C A rs141653509 95539200 + 95539180 95539220 41 TTGGCTTCCTCGGTAGCTTCCACACGGAGCATGCCCGAGAG TTGGCTTCCTCGGTAGCTTCCACAAGGAGCATGCCCGAGAG < 41bp 0.4973654061623 0.838771802950466 0.087876946 0.16747311 prediction 0.677543605900932 Functional Gain - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95539200 chr4:95539204 synonymous SNV . 0 25 hm5C_associated_SNPs_99757 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:95539170-95539227
64251 chr19 38882740 38882740 1 + C A HNSC 38882736 + 38882716 38882756 41 AGAAGAGCCTGCTGGCTGCGCTGGCCGCACTGGGTCGAGGT AGAAGAGCCTGCTGGCTGCGCTGGACGCACTGGGTCGAGGT < 41bp 0.537719918142665 0.876473016305149 0.23518127 0.33306873 prediction 0.677506196324966 Functional Gain - SPRED3 ENSG00000188766 CDS Human protein_coding chr19:38882736 chr19:38882740 nonsynonymous SNV 0.977 1 25 hm5C_associated_SNPs_99758 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:38882706-38882754
64251 chr1 24077388 24077388 1 + C A rs142849555 24077384 + 24077364 24077404 41 AGAAGAGCAATTCCCGAAAGCGCCCTCGGGATGCCCTGCAG AGAAGAGCAATTCCCGAAAGCGCCATCGGGATGCCCTGCAG < 41bp 0.546484306940164 0.885123027019528 0.08978593 0.22669503 prediction 0.677277440158728 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077384 chr1:24077388 nonsynonymous SNV 0.911 1 25 hm5C_associated_SNPs_99760 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:24077387-24077388
64251 chr3 142841163 142841163 1 + C A LUAD 142841159 + 142841139 142841179 41 AGGTGGAGGAGTTTTGCTACCAGCCCATGGCCGTCCTGGGC AGGTGGAGGAGTTTTGCTACCAGCACATGGCCGTCCTGGGC < 41bp 0.525586401043742 0.864108422642772 0.2854999 0.3532322 prediction 0.67704404319806 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142841159 chr3:142841163 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_99763 0 0 1 RBM15 POSTAR2 ENCODE chr3:142841151-142841196
64251 chr8 22267554 22267554 1 + C A STAD 22267550 + 22267530 22267570 41 TGCACAGAGAAAGCGTTTTTCAGCCGTGTGCTCACTTACTT TGCACAGAGAAAGCGTTTTTCAGCAGTGTGCTCACTTACTT < 41bp 0.482680136758152 0.838422467790575 0.45592818 0.60952497 prediction 0.67684493558115 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22267550 chr8:22267554 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_99768 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr8:22267536-22267557
64251 chr1 40981058 40981058 1 + T G STAD 40981055 + 40981035 40981075 41 ACTTGTCTTCTTGTCTCTAACACTGTCAGACCTCCCAGTTA ACTTGTCTTCTTGTCTCTAACACGGTCAGACCTCCCAGTTA < 41bp 0.493158622853338 0.8383794341752 0.13509217 0.84608173 prediction 0.6767588683504 Functional Gain - EXO5 ENSG00000164002 CDS Human protein_coding chr1:40981055 chr1:40981058 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_99770 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:40981018-40981071
64251 chr1 43233204 43233204 1 + C A rs201893746 43233200 + 43233180 43233220 41 GAGCCCTGGTGGAGCTCACCCCGACCCCCGGCGGCCTGGCC GAGCCCTGGTGGAGCTCACCCCGAACCCCGGCGGCCTGGCC < 41bp 0.498230331642145 0.838303831317945 0.45769566 0.4095089 prediction 0.676607662635889 Functional Gain - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43233200 chr1:43233204 nonsynonymous SNV 0.707 0 25 hm5C_associated_SNPs_99775 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:43233088-43233227
64251 chr12 32134711 32134711 1 + C A rs140312693 32134707 + 32134687 32134727 41 ACAGCAGTATGCCACGCAAACTGACAAAAGACCTCCTCCTC ACAGCAGTATGCCACGCAAACTGAAAAAAGACCTCCTCCTC < 41bp 0.512609416268701 0.85087515719076 0.085237116 0.28730702 prediction 0.676531481844117 Functional Gain - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32134707 chr12:32134711 nonsynonymous SNV 0.074 0 25 hm5C_associated_SNPs_99777 0 0 2 IGF2BP2 POSTAR2 ENCODE chr12:32134655-32134711
64251 chr10 70333702 70333702 1 + C A LUAD 70333698 + 70333678 70333718 41 TGGGTATAGCCCAACTCTCTCAGGCTGGTCCTAGCAAATCA TGGGTATAGCCCAACTCTCTCAGGATGGTCCTAGCAAATCA < 41bp 0.48920394943145 0.837861818023815 0.89299387 0.89547116 prediction 0.67572363604763 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70333698 chr10:70333702 nonsynonymous SNV 0.315 1 25 hm5C_associated_SNPs_99789 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:70333682-70333705
64251 chrX 56590841 56590841 1 + C A SARC 56590837 + 56590817 56590857 41 ATGCAGCAGCAGCTTATGGCCAGCCCTGAGATGATGATCCA ATGCAGCAGCAGCTTATGGCCAGCACTGAGATGATGATCCA < 41bp 0.484294797794194 0.837824781432638 0.10891661 0.062089384 prediction 0.675649562865275 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590837 chrX:56590841 nonsynonymous SNV 0.973 5 25 hm5C_associated_SNPs_99791 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:56590828-56590849
64251 chr3 195953940 195953940 1 + C A UCEC 195953936 + 195953916 195953956 41 GCCGTCTACCTGTACAAGAACACCCTTTGCCCCATCAAGAG GCCGTCTACCTGTACAAGAACACCATTTGCCCCATCAAGAG < 41bp 0.435910036263291 0.837816594909784 0.12011886 0.10791895 prediction 0.675633189819568 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195953936 chr3:195953940 nonsynonymous SNV 0.888 0 25 hm5C_associated_SNPs_99793 0 0 2 GRWD1 POSTAR2 ENCODE chr3:195953920-195954016
64251 chr14 95030148 95030148 1 + C A ACC 95030144 + 95030124 95030164 41 TTGAGGGCCTGGGCTTCAACCTCACCGAGCTGTCTGAGTCC TTGAGGGCCTGGGCTTCAACCTCAACGAGCTGTCTGAGTCC < 41bp 0.447311458344532 0.837768034743749 0.060493767 0.21761456 prediction 0.675536069487497 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030144 chr14:95030148 nonsynonymous SNV 0.759 5 25 hm5C_associated_SNPs_99796 0 0 2 RPS3 POSTAR2 ENCODE chr14:95030108-95030217
64251 chr5 44809402 44809402 1 + T G MESO 44809399 + 44809379 44809419 41 GTACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGC GTACCAGTACTTCACCAAGACCGGGTTCCTGTCGGGTCTGC < 41bp 0.488050141601842 0.837719741402311 0.2825635 0.5318111 prediction 0.675439482804623 Functional Gain - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809399 chr5:44809402 nonsynonymous SNV 0.816 1 24 hm5C_associated_SNPs_99799 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:44809365-44809402
64251 chr19 58773097 58773097 1 + T G THYM 58773094 + 58773074 58773114 41 CTCATACACCAGAGAACACACACTGGAGAAAAGCCCTTCGA CTCATACACCAGAGAACACACACGGGAGAAAAGCCCTTCGA < 41bp 0.49367341276142 0.837508139973898 0.043117613 0.10004425 prediction 0.675016279947796 Functional Gain - ZNF544 ENSG00000198131 CDS Human protein_coding chr19:58773094 chr19:58773097 synonymous SNV . 0 24 hm5C_associated_SNPs_99807 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:58773071-58773103
64251 chr19 11144002 11144002 1 + C A HNSC 11143998 + 11143978 11144018 41 CAGGACCGAGCCCACCGCATCGGGCAGCAGAACGAGGTGCG CAGGACCGAGCCCACCGCATCGGGAAGCAGAACGAGGTGCG < 41bp 0.49556404721983 0.837474152399245 0.88587874 0.9210372 prediction 0.67494830479849 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11143998 chr19:11144002 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_99809 0 0 3 SF3B4 POSTAR2 ENCODE chr19:11143917-11144014
64251 chr11 6415741 6415741 1 + T G OV 6415738 + 6415718 6415758 41 GCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCC GCTACTCTTTGTGCCCAGCTCTCGGCCCGTGCTGACAGCCC < 41bp 0.516085134739948 0.853136222945079 0.32277977 0.3815284 prediction 0.674102176410262 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415738 chr11:6415741 synonymous SNV . 0 24 hm5C_associated_SNPs_99823 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:6415726-6415764
64251 chr16 1823828 1823828 1 + C A rs573283501 1823824 + 1823804 1823844 41 CGGTGGACCCGAGCGAGTCCCGACCCCTGCCCCCGCAGCGT CGGTGGACCCGAGCGAGTCCCGACACCTGCCCCCGCAGCGT < 41bp 0.496107537374623 0.837014852192947 0.34630227 0.38315392 prediction 0.674029704385894 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1823824 chr16:1823828 nonsynonymous SNV 0.076 1 25 hm5C_associated_SNPs_99827 0 0 3 PPIG POSTAR2 ENCODE chr16:1823762-1823846
64251 chr1 162467956 162467956 1 + T G CHOL 162467953 + 162467933 162467973 41 CGCCCCCCGGCGCCCTCAAGCAGTTCTTGCCGCCAGGAACC CGCCCCCCGGCGCCCTCAAGCAGGTCTTGCCGCCAGGAACC < 41bp 0.489582560016825 0.836858540845633 0.72965956 0.9242791 prediction 0.673717081691267 Functional Gain - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162467953 chr1:162467956 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_99833 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:162467954-162467977
64251 chr12 119594464 119594464 1 + C A rs199585212 119594460 + 119594440 119594480 41 GCCGGAGACGGAGCCGGACCCGCACGAGCAGCAGCTCTAGC GCCGGAGACGGAGCCGGACCCGCAAGAGCAGCAGCTCTAGC < 41bp 0.517347227109553 0.854060026618028 0.39250863 0.72379756 prediction 0.67342559901695 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119594460 chr12:119594464 nonsynonymous SNV 0.932 1 25 hm5C_associated_SNPs_99839 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119594460-119594500
64251 chr20 57768917 57768917 1 + C A ACC 57768913 + 57768893 57768933 41 AGTACCTCCTCAGGTTACCTCAGGCAGAGACCCCCTTACCA AGTACCTCCTCAGGTTACCTCAGGAAGAGACCCCCTTACCA < 41bp 0.47635885527627 0.836677193530897 0.822349 0.89735997 prediction 0.673354387061793 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57768913 chr20:57768917 nonsynonymous SNV 0.930 0 25 hm5C_associated_SNPs_99841 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:57768906-57768935
64251 chr12 124132567 124132567 1 + C A COAD 124132563 + 124132543 124132583 41 TGGAGACTTCTTCGGAGACCCTGGCAACCCTCCTGAATTTA TGGAGACTTCTTCGGAGACCCTGGAAACCCTCCTGAATTTA < 41bp 0.463390249896811 0.836586044065407 0.12236631 0.36254048 prediction 0.673172088130815 Functional Gain - GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124132563 chr12:124132567 synonymous SNV . 0 25 hm5C_associated_SNPs_99844 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124132528-124132573
64251 chr12 54448765 54448765 1 + C A ACC 54448761 + 54448741 54448781 41 CGAAGGAGAAGGATCGAGATCGCCCACTCGCTGTGCCTCTC CGAAGGAGAAGGATCGAGATCGCCAACTCGCTGTGCCTCTC < 41bp 0.444431633613546 0.836584731241217 0.030327499 0.18147829 prediction 0.673169462482433 Functional Gain - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448761 chr12:54448765 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_99845 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:54448725-54448765
64251 chr20 31607413 31607413 1 + C A COAD 31607409 + 31607389 31607429 41 GCCCGCCAGTTTCCCGAGCCCATGCCTGTGGTGCTCAAGGT GCCCGCCAGTTTCCCGAGCCCATGACTGTGGTGCTCAAGGT < 41bp 0.476444063106248 0.836525558401033 0.18545967 0.24094883 prediction 0.673051116802066 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31607409 chr20:31607413 nonsynonymous SNV 0.359 1 25 hm5C_associated_SNPs_99847 0 0 2 RPS3 POSTAR2 ENCODE chr20:31607409-31607461
64251 chr4 151504305 151504305 1 + C A COAD 151504301 + 151504281 151504321 41 GTCTGTAAGGTGGTCTCGGACGTGCTCAAGGAAGTGGAGGT GTCTGTAAGGTGGTCTCGGACGTGATCAAGGAAGTGGAGGT < 41bp 0.491944469543079 0.836411735378624 0.3383463 0.37557122 prediction 0.672823470757248 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504301 chr4:151504305 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99851 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chr4:151504276-151504311
64251 chr7 151817987 151817987 1 + C A rs143156028 151817983 + 151817963 151818003 41 TTGTCTAGATATGTCAGAGACTCGCTCATCAGACCCGCCAC TTGTCTAGATATGTCAGAGACTCGATCATCAGACCCGCCAC < 41bp 0.47153101848952 0.836342507894867 0.065832436 0.3902282 prediction 0.672685015789734 Functional Gain - GALNT11 ENSG00000178234 CDS Human protein_coding chr7:151817983 chr7:151817987 synonymous SNV . 0 25 hm5C_associated_SNPs_99853 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:151817952-151817990
64251 chrX 65238734 65238734 1 + C A UCEC 65238730 + 65238710 65238750 41 GGCCTGGCCTCCTGCAGTGCCACGCTCCGTGTATTTGACAA GGCCTGGCCTCCTGCAGTGCCACGATCCGTGTATTTGACAA < 41bp 0.523536154541932 0.859866967772548 0.07573703 0.15753204 prediction 0.672661626461231 Functional Gain - MIR223 ENSG00000207939 ncRNA_exonic Human other chrX:65238730 chrX:65238734 . . 0 25 hm5C_associated_SNPs_99855 0 0 1 SMNDC1 POSTAR2 ENCODE chrX:65238710-65238736
64251 chr1 11347018 11347018 1 + T G rs182097672 11347015 + 11346995 11347035 41 GAGCCCTGAAACGGTAGAGGCACTGCCATCCTTGTGGGATA GAGCCCTGAAACGGTAGAGGCACGGCCATCCTTGTGGGATA < 41bp 0.505063816486835 0.841112671994534 0.17052701 0.3312145 prediction 0.672097711015398 Functional Gain - UBIAD1 ENSG00000120942 UTR3 Human protein_coding chr1:11347015 chr1:11347018 . . 0 24 hm5C_associated_SNPs_99864 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:11346982-11347021
64251 chr11 20417373 20417373 1 + T G LUAD 20417370 + 20417350 20417390 41 TGTAGAAGATCTTTATGAACCGGTGTCAGTACCCTTCTCAT TGTAGAAGATCTTTATGAACCGGGGTCAGTACCCTTCTCAT < 41bp 0.486240709500724 0.83601174836137 0.35914892 0.9408473 prediction 0.67202349672274 Functional Gain - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20417370 chr11:20417373 nonsynonymous SNV 0.022 0 24 hm5C_associated_SNPs_99865 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:20417355-20417386
64251 chr19 48830117 48830117 1 + C A LAML 48830113 + 48830093 48830133 41 ACTGCAGCCATGTCACTCCTCTTGCTGGTGGTCTCAGCCCT ACTGCAGCCATGTCACTCCTCTTGATGGTGGTCTCAGCCCT < 41bp 0.459797210235294 0.835709653002304 0.1982241 0.23772904 prediction 0.671419306004608 Functional Gain - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48830113 chr19:48830117 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_99872 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr19:48830099-48830132
64251 chr20 5100291 5100291 1 - G T UCEC 5100295 - 5100275 5100315 41 CACGTCTCTTTGGTGCAGCTCACCCTGCGGTCTGAGGGCTT CACGTCTCTTTGGTGCAGCTCACCATGCGGTCTGAGGGCTT < 41bp 0.447127154295792 0.835671672258179 0.24392572 0.15253562 prediction 0.671343344516358 Functional Gain - PCNA ENSG00000132646 CDS Human protein_coding chr20:5100295 chr20:5100291 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_99873 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:5100220-5100320
64251 chrX 153609402 153609402 1 + C A COAD 153609398 + 153609378 153609418 41 TCTTCCTCTTCATGGCTCACCCGCCGTGCCATCCGGCCTGA TCTTCCTCTTCATGGCTCACCCGCAGTGCCATCCGGCCTGA < 41bp 0.52689101596895 0.862548056205877 0.03572762 0.022576243 prediction 0.671314080473853 Functional Gain - EMD ENSG00000102119 CDS Human protein_coding chrX:153609398 chrX:153609402 nonsynonymous SNV 0.689 2 25 hm5C_associated_SNPs_99875 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153609373-153609405
64251 chr1 1469501 1469501 1 + C A rs141788544 1469497 + 1469477 1469517 41 CGGAGCCTGGCCGCGGACCCCTCCCACCCCTGCCTTGCCGG CGGAGCCTGGCCGCGGACCCCTCCAACCCCTGCCTTGCCGG < 41bp 0.480883442535307 0.835616018589193 0.35857606 0.97293687 prediction 0.671232037178386 Functional Gain - ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469497 chr1:1469501 . . 0 25 hm5C_associated_SNPs_99878 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:1469464-1469501
64251 chrX 118708684 118708684 1 + C A LUAD 118708680 + 118708660 118708700 41 GACCCCGCTCGCGACATGTCCACCCCGGCTCGGCGGCGCCT GACCCCGCTCGCGACATGTCCACCACGGCTCGGCGGCGCCT < 41bp 0.524373709712859 0.859986344915052 0.06763643 0.037604213 prediction 0.671225270404386 Functional Gain - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118708680 chrX:118708684 nonsynonymous SNV 0.982 1 25 hm5C_associated_SNPs_99879 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585674 chrX:118708677-118708704
64251 chr15 40764405 40764405 1 + C A rs138273557 40764401 + 40764381 40764421 41 TCGCCAGGCCTGGTACCGGCCAGCCAGCCCCGAAAGCCTGC TCGCCAGGCCTGGTACCGGCCAGCAAGCCCCGAAAGCCTGC < 41bp 0.480498431826015 0.835568389773595 0.09580442 0.1500026 prediction 0.671136779547189 Functional Gain - CHST14 ENSG00000169105 CDS Human protein_coding chr15:40764401 chr15:40764405 synonymous SNV . 0 25 hm5C_associated_SNPs_99880 0 0 2 SND1 POSTAR2 ENCODE chr15:40764374-40764419
64251 chr1 1262727 1262727 1 + C A rs145316505 1262723 + 1262703 1262743 41 GGCGGCCCGCAGAGCGAGCACTACCGCAGCCTGCAGGCCAT GGCGGCCCGCAGAGCGAGCACTACAGCAGCCTGCAGGCCAT < 41bp 0.53015816283732 0.86572396961549 0.44988364 0.9192977 prediction 0.67113161355634 Functional Gain - CPTP ENSG00000224051 CDS Human protein_coding chr1:1262723 chr1:1262727 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_99881 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:1262720-1262744
64251 chr20 55052076 55052076 1 + C A UCEC 55052072 + 55052052 55052092 41 GCTGAAGCTTTCTGATAATCCTGCCTGGGAAGGGGATAAAG GCTGAAGCTTTCTGATAATCCTGCATGGGAAGGGGATAAAG < 41bp 0.554309296858546 0.889844297780503 0.1068908 0.08932683 prediction 0.671070001843914 Functional Gain - RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55052072 chr20:55052076 synonymous SNV . 0 25 hm5C_associated_SNPs_99883 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55052039-55052101
64251 chr1 19584431 19584431 1 + T G GBM 19584428 + 19584408 19584448 41 CCTGGAGCAGTTCCCCCACTCCATGGAGCCACAGCTCAGGC CCTGGAGCAGTTCCCCCACTCCAGGGAGCCACAGCTCAGGC < 41bp 0.475045952374579 0.835407262446717 0.25430298 0.72615004 prediction 0.670814524893434 Functional Gain - MRTO4 ENSG00000053372 CDS Human protein_coding chr1:19584428 chr1:19584431 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_99890 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:19584415-19584473
64251 chr4 57883766 57883766 1 + C A OV 57883762 + 57883742 57883782 41 ACCAGTCTGCTATGGGTAAGCAGGCTATGGGAGTTTACATC ACCAGTCTGCTATGGGTAAGCAGGATATGGGAGTTTACATC < 41bp 0.514186562713759 0.84941390865554 0.5100535 0.6422916 prediction 0.670454691883563 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57883762 chr4:57883766 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_99897 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr4:57883735-57883774
64251 chr13 88327723 88327723 1 + C A THYM 88327719 + 88327699 88327739 41 ATAGCTGGATGCTGCAGACTCTAGCGTTTGCTGTAACATCT ATAGCTGGATGCTGCAGACTCTAGAGTTTGCTGTAACATCT < 41bp 0.475102870445354 0.835105582141469 0.21459147 0.21919945 prediction 0.670211164282938 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327719 chr13:88327723 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_99900 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88327640-88327780
64251 chr12 113875787 113875787 1 + C A COAD 113875783 + 113875763 113875803 41 GGCTCCAGGCCGAGGGCTGCCTGCCCCCTTCCCTGACTTCA GGCTCCAGGCCGAGGGCTGCCTGCACCCTTCCCTGACTTCA < 41bp 0.541290140175846 0.876379128040515 0.06316638 0.08802119 prediction 0.670177975729337 Functional Gain - SDSL ENSG00000139410 CDS Human protein_coding chr12:113875783 chr12:113875787 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_99901 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:113875768-113875805
64251 chr19 34984527 34984527 1 + C A KIRC 34984523 + 34984503 34984543 41 TCTACTGCGTGCGAGACTATCACACGTGAGTTGCTGGTGCT TCTACTGCGTGCGAGACTATCACAAGTGAGTTGCTGGTGCT < 41bp 0.458027607880579 0.835068032141312 0.19867298 0.27988723 prediction 0.670136064282624 Functional Gain - WTIP ENSG00000142279 CDS Human protein_coding chr19:34984523 chr19:34984527 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_99903 0 0 1 PRPF8 POSTAR2 ENCODE chr19:34984510-34984575
64251 chr5 68555712 68555712 1 + C A LIHC 68555708 + 68555688 68555728 41 TAAAACTGGCAGATTTTGGCCTGGCCAAATCTTTTGGGAGC TAAAACTGGCAGATTTTGGCCTGGACAAATCTTTTGGGAGC < 41bp 0.463303797358275 0.835053981623791 0.36838096 0.44465965 prediction 0.670107963247581 Functional Gain - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68555708 chr5:68555712 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_99904 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:68555688-68555722
64251 chr12 117013834 117013834 1 + C A rs539169146 117013830 + 117013810 117013850 41 ACTTATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAA ACTTATTCGAGAGCAGCATCCAACAAAAATCCCGGTGATAA < 41bp 0.463636870370416 0.83500405076038 0.10734135 0.07556343 prediction 0.670008101520761 Functional Gain - MAP1LC3B2 ENSG00000171471 CDS Human other chr12:117013830 chr12:117013834 synonymous SNV . 0 25 hm5C_associated_SNPs_99908 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:117013825-117013853
64251 chr7 76121568 76121568 1 + C A LUAD 76121564 + 76121544 76121584 41 CCAGCAGAGTCCAGCAGGCGCTCGCAGGTAGGTGCCTGACC CCAGCAGAGTCCAGCAGGCGCTCGAAGGTAGGTGCCTGACC < 41bp 0.450538917139697 0.834906018618266 0.45867804 0.67071694 prediction 0.669812037236532 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76121564 chr7:76121568 nonsynonymous SNV 0.840 3 25 hm5C_associated_SNPs_99912 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:76121539-76121616
64251 chr11 75508318 75508318 1 + C A CESC 75508314 + 75508294 75508334 41 TGAGTCTCTGAGCTCCATGCCTGGCAAGAATGCAGTCACCC TGAGTCTCTGAGCTCCATGCCTGGAAAGAATGCAGTCACCC < 41bp 0.44397526820818 0.834901191798307 0.13870248 0.25927496 prediction 0.669802383596614 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75508314 chr11:75508318 synonymous SNV . 0 25 hm5C_associated_SNPs_99913 0 0 2 PRPF8 POSTAR2 ENCODE chr11:75508314-75508465
64251 chr17 45286872 45286872 1 + C A UCEC 45286868 + 45286848 45286888 41 TCCAGCCCCTGCACCAGCCCCTGCCCCAGCTCCTGAGGCTC TCCAGCCCCTGCACCAGCCCCTGCACCAGCTCCTGAGGCTC < 41bp 0.435374096230655 0.834844580530609 0.4427966 0.37338108 prediction 0.669689161061217 Functional Gain - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45286868 chr17:45286872 synonymous SNV . 0 25 hm5C_associated_SNPs_99916 0 0 1 DDX55 POSTAR2 ENCODE chr17:45286777-45286885
64251 chr1 235602123 235602123 1 + C A CHOL 235602119 + 235602099 235602139 41 AGGCGGAGAGCTGAGCTTGACTACCGAAAAGCTTTTGGAAA AGGCGGAGAGCTGAGCTTGACTACAGAAAAGCTTTTGGAAA < 41bp 0.443844065579449 0.83478792111227 0.12218943 0.84118044 prediction 0.66957584222454 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235602119 chr1:235602123 synonymous SNV . 0 25 hm5C_associated_SNPs_99918 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235602081-235602124
64251 chr15 89659617 89659617 1 + C A UCEC 89659613 + 89659593 89659633 41 CCGTGTTTGATGGAGTGAAGCTGGCTGCAGTGGCTGCTGTG CCGTGTTTGATGGAGTGAAGCTGGATGCAGTGGCTGCTGTG < 41bp 0.533000096222617 0.867787639533681 0.8043175 0.8911996 prediction 0.669575086622129 Functional Gain - ABHD2 ENSG00000140526 CDS Human protein_coding chr15:89659613 chr15:89659617 nonsynonymous SNV 0.959 4 25 hm5C_associated_SNPs_99919 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr15:89659595-89659628
64251 chr19 808631 808631 1 + C A rs1058275 808627 + 808607 808647 41 GCACCAGAACGTGCAGCTGCCCCGCGAGGGCCAGGAGGACC GCACCAGAACGTGCAGCTGCCCCGAGAGGGCCAGGAGGACC < 41bp 0.44981549917649 0.834756055687607 0.05182013 0.05103472 prediction 0.669512111375213 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808627 chr19:808631 synonymous SNV . 0 25 hm5C_associated_SNPs_99920 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:808612-808648
64251 chr16 23695329 23695329 1 + C A COAD 23695325 + 23695305 23695345 41 CCTGCCCGTCTCCCCATCACCTGCCTGACCATTCCACCAAG CCTGCCCGTCTCCCCATCACCTGCATGACCATTCCACCAAG < 41bp 0.560987883697371 0.89571787758277 0.16734442 0.31427133 prediction 0.669459987770798 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23695325 chr16:23695329 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_99923 0 0 17 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23695271-23695363
64251 chr11 34982013 34982013 1 + C A rs139052284 34982009 + 34981989 34982029 41 CGCAATATTCTGGAAAAACACTCACTGGATGCTAGCCAGGG CGCAATATTCTGGAAAAACACTCAATGGATGCTAGCCAGGG < 41bp 0.43384091854191 0.8346142323612 0.033336908 0.3219275 prediction 0.6692284647224 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34982009 chr11:34982013 nonsynonymous SNV 0.320 3 25 hm5C_associated_SNPs_99926 1 0 10 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr11:34981983-34982015
64251 chr11 60702171 60702171 1 + C A rs140313442 60702167 + 60702147 60702187 41 CCACACGCCCGCGTGCTGGACTCGCGTGTAGCCTCTCTGGA CCACACGCCCGCGTGCTGGACTCGAGTGTAGCCTCTCTGGA < 41bp 0.475938483094124 0.834544720206952 0.37394422 0.8125753 prediction 0.669089440413904 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60702167 chr11:60702171 nonsynonymous SNV 0.090 3 25 hm5C_associated_SNPs_99930 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:60702162-60702196
64251 chr20 17971213 17971213 1 + C A rs566327913 17971209 + 17971189 17971229 41 AGGGAGGACACATCAGCCCACTACCGCTGCCAACACCAATG AGGGAGGACACATCAGCCCACTACAGCTGCCAACACCAATG < 41bp 0.481497313461505 0.83428855531326 0.0964351 0.15212971 prediction 0.668577110626521 Functional Gain - MGME1 ENSG00000125871 UTR3 Human protein_coding chr20:17971209 chr20:17971213 . . 0 25 hm5C_associated_SNPs_99935 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:17971204-17971229
64251 chr19 19307776 19307776 1 + C A GBM 19307772 + 19307752 19307792 41 GCCTGTTGTCTGTTTCCCAGCAGGCAGCTCCCTGAAGCACT GCCTGTTGTCTGTTTCCCAGCAGGAAGCTCCCTGAAGCACT < 41bp 0.480660125134651 0.834245008065528 0.29908034 0.3422016 prediction 0.668490016131056 Functional Gain - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19307772 chr19:19307776 synonymous SNV . 0 25 hm5C_associated_SNPs_99937 0 0 1 YBX3 POSTAR2 ENCODE chr19:19307772-19307856
64251 chr19 18976564 18976564 1 + C A COAD 18976560 + 18976540 18976580 41 CCTTCCCAGATGAGCCAGCCCGGCCTCTCCCAGCCGGAGCT CCTTCCCAGATGAGCCAGCCCGGCATCTCCCAGCCGGAGCT < 41bp 0.461381962954991 0.834216149943693 0.12876049 0.3570842 prediction 0.668432299887386 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976560 chr19:18976564 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99939 0 0 2 RPS3 POSTAR2 ENCODE chr19:18976531-18976577
64251 chr2 106510164 106510164 1 + C A rs141859585 106510160 + 106510140 106510180 41 GTGCGATGGCAGTGAGGAGACTGCCCAGTGCCTTTGGGGCT GTGCGATGGCAGTGAGGAGACTGCACAGTGCCTTTGGGGCT < 41bp 0.527786197171747 0.861989052725265 0.3181337 0.4127087 prediction 0.668405711107037 Functional Gain - NCK2 ENSG00000071051 UTR3 Human protein_coding chr2:106510160 chr2:106510164 . . 0 25 hm5C_associated_SNPs_99941 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:106510144-106510175
64251 chr1 246929399 246929399 1 + C A GBM 246929395 + 246929375 246929415 41 CTACCCCCATAGCTATGGTTCAGGCAGCCATGACTCTTCTA CTACCCCCATAGCTATGGTTCAGGAAGCCATGACTCTTCTA < 41bp 0.468917325456559 0.834195306610977 0.21542445 0.37167907 prediction 0.668390613221954 Functional Gain - SCCPDH ENSG00000143653 CDS Human protein_coding chr1:246929395 chr1:246929399 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_99943 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:246929386-246929414
64251 chr4 170541724 170541724 1 + C A rs79371927 170541720 + 170541700 170541740 41 ACCTTTCGGGCTCCTGACTCCTGCCGCTTCTCTTCCCCTTC ACCTTTCGGGCTCCTGACTCCTGCAGCTTCTCTTCCCCTTC < 41bp 0.502362159615706 0.836534034292329 0.4170554 0.8052138 prediction 0.668343749353244 Functional Gain - CLCN3 ENSG00000109572 UTR5 Human protein_coding chr4:170541720 chr4:170541724 . . 0 25 hm5C_associated_SNPs_99945 0 0 1 NCBP2 POSTAR2 ENCODE chr4:170541723-170541793
64251 chr20 61296367 61296367 1 + C A rs148710404 61296363 + 61296343 61296383 41 CACCGAGGCCACTCTCATCACCGGCATGTCCACGTTCAGCC CACCGAGGCCACTCTCATCACCGGAATGTCCACGTTCAGCC < 41bp 0.452762461378176 0.834125267794918 0.025272995 0.09222722 prediction 0.668250535589836 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296363 chr20:61296367 synonymous SNV . 0 25 hm5C_associated_SNPs_99947 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61296350-61296370
64251 chr8 23429144 23429144 1 + C A LUAD 23429140 + 23429120 23429160 41 GTCTGTAAGACCCTTCTGAACACTCAGGAGAACGTGGCCCT GTCTGTAAGACCCTTCTGAACACTAAGGAGAACGTGGCCCT < 41bp 0.467953944036596 0.834112076987435 0.022267759 0.17083001 prediction 0.66822415397487 Functional Gain - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23429140 chr8:23429144 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_99950 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:23429026-23429214
64251 chr19 7680162 7680162 1 + C A UCEC 7680158 + 7680138 7680178 41 GCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGA GCAGAGGAGGCGCGGCGGCGCAAGAAGTGGCAGGAGGTGGA < 41bp 0.527723533673488 0.861799749530182 0.66265506 0.75788575 prediction 0.668152431713388 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7680158 chr19:7680162 nonsynonymous SNV 0.160 2 25 hm5C_associated_SNPs_99952 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:7680151-7680177
64251 chrX 101382465 101382465 1 + T G ESCA 101382462 + 101382442 101382482 41 TGCAGGGCCCCACGAAGGGACACTGAAGACATTCCTTATGT TGCAGGGCCCCACGAAGGGACACGGAAGACATTCCTTATGT < 41bp 0.478134550189101 0.834014451599299 0.18225104 0.34341395 prediction 0.668028903198598 Functional Gain - TCEAL2 ENSG00000184905 CDS Human protein_coding chrX:101382462 chrX:101382465 synonymous SNV . 0 24 hm5C_associated_SNPs_99959 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:101382460-101382480
64251 chr2 32445354 32445354 1 + C A UCEC 32445350 + 32445330 32445370 41 GTTCTTGCTCATGTGACCAACAGGCTGTACACTCTAGTGTC GTTCTTGCTCATGTGACCAACAGGATGTACACTCTAGTGTC < 41bp 0.515011184548874 0.849021516067969 0.17003804 0.3601601 prediction 0.668020663038192 Functional Gain - SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32445350 chr2:32445354 nonsynonymous SNV 0.943 4 25 hm5C_associated_SNPs_99960 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:32445282-32445418
64251 chr11 61897570 61897570 1 + C A UCEC 61897566 + 61897546 61897586 41 GTCACCCAGCTCATGTCCACCGAGCCTCTGCCCCGCACTCT GTCACCCAGCTCATGTCCACCGAGACTCTGCCCCGCACTCT < 41bp 0.475355051146285 0.833641539847876 0.26905406 0.4110363 prediction 0.667283079695752 Functional Gain - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897566 chr11:61897570 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_99975 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:61897560-61897580
64251 chr2 203242237 203242237 1 + C A GBM 203242233 + 203242213 203242253 41 CAGCGGCCCTGGCGGGTGCCCTGGCTACCATGGACCATCCT CAGCGGCCCTGGCGGGTGCCCTGGATACCATGGACCATCCT < 41bp 0.488524958186347 0.833618095064332 0.68893033 0.75324214 prediction 0.667236190128664 Functional Gain - BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203242233 chr2:203242237 nonsynonymous SNV 0.864 1 25 hm5C_associated_SNPs_99977 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:203242200-203242245
64251 chr10 72496543 72496543 1 + C A HNSC 72496539 + 72496519 72496559 41 GCTGGATGGGACTGAGTGTGCACCCGGCAAGGTACCTGTGG GCTGGATGGGACTGAGTGTGCACCAGGCAAGGTACCTGTGG < 41bp 0.452454662660895 0.833578938038631 0.19508469 0.16580102 prediction 0.667157876077263 Functional Gain - ADAMTS14 ENSG00000138316 CDS Human protein_coding chr10:72496539 chr10:72496543 synonymous SNV . 0 25 hm5C_associated_SNPs_99979 0 0 6 BUD13 POSTAR2 ENCODE chr10:72496508-72496545
64251 chr22 23632636 23632636 1 + C A rs5759683 23632632 + 23632612 23632652 41 TTTGGGGAGGAGGGTTGCAGCGGCCGAGCCAGGGTCTCCAC TTTGGGGAGGAGGGTTGCAGCGGCAGAGCCAGGGTCTCCAC < 41bp 0.481966177569134 0.833572477389369 0.89464843 0.90522563 prediction 0.667144954778738 Functional Gain - BCR ENSG00000186716 intronic Human protein_coding chr22:23632632 chr22:23632636 . . 0 25 hm5C_associated_SNPs_99980 0 0 6 AARS POSTAR2 ENCODE chr22:23632607-23632651
64251 chr5 42719182 42719182 1 + C A LAML 42719178 + 42719158 42719198 41 CACCCGGAAATGGTCTCACTCTGCCAAGAAAACTTCCTTAT CACCCGGAAATGGTCTCACTCTGCAAAGAAAACTTCCTTAT < 41bp 0.471218422969706 0.833542023972834 0.052612394 0.09813014 prediction 0.667084047945668 Functional Gain - GHR ENSG00000112964 CDS Human protein_coding chr5:42719178 chr5:42719182 nonsynonymous SNV 0.886 1 25 hm5C_associated_SNPs_99981 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:42719135-42719185
64251 chr1 46812740 46812740 1 + C A UCEC 46812736 + 46812716 46812756 41 GACACTAGCGTTGCTTCAGACTGGCTGTTGCCGTAAGTCAG GACACTAGCGTTGCTTCAGACTGGATGTTGCCGTAAGTCAG < 41bp 0.474742187494182 0.833481512493161 0.27939236 0.30346906 prediction 0.666963024986323 Functional Gain - NSUN4 ENSG00000117481 CDS Human protein_coding chr1:46812736 chr1:46812740 synonymous SNV . 0 25 hm5C_associated_SNPs_99983 0 0 1 PRPF8 POSTAR2 ENCODE chr1:46812718-46812785
64251 chr10 99211577 99211577 1 + C A UCEC 99211573 + 99211553 99211593 41 TACGGCAAGGTCTGCCTGCGCTCCCTGCTCTACAACTCCTT TACGGCAAGGTCTGCCTGCGCTCCATGCTCTACAACTCCTT < 41bp 0.558876399761831 0.892321843318519 0.066299886 0.47411397 prediction 0.666890887113375 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211573 chr10:99211577 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_99984 0 0 1 DDX3X POSTAR2 ENCODE chr10:99211443-99211580
64251 chr3 47455570 47455570 1 + C A UCEC 47455566 + 47455546 47455586 41 AGGTTGTCTGAGATGACACCCAAGCTTGCACCACAGCCCAG AGGTTGTCTGAGATGACACCCAAGATTGCACCACAGCCCAG < 41bp 0.514991069415273 0.848337923807281 0.8659323 0.8887399 prediction 0.666693708784015 Functional Gain - SCAP ENSG00000114650 CDS Human protein_coding chr3:47455566 chr3:47455570 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_99988 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:47455558-47455596
64251 chr12 119592130 119592130 1 + C A PRAD 119592126 + 119592106 119592146 41 CGTCGGAGACGTCGGTCCTACTCGCCTATGAGAAAGCGCCG CGTCGGAGACGTCGGTCCTACTCGACTATGAGAAAGCGCCG < 41bp 0.445627121356165 0.833252181298826 0.16475639 0.37657362 prediction 0.666504362597652 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119592126 chr12:119592130 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_99990 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119592120-119592140
64251 chr4 52943093 52943093 1 + T G UCEC 52943090 + 52943070 52943110 41 ATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCAGCGAT ATGTGGCGCGCAAGGCTGCCCTCGTGTCCCGGTTCAGCGAT < 41bp 0.525016751807942 0.858116570015262 0.008102536 0.031750113 prediction 0.666199636414641 Functional Gain - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52943090 chr4:52943093 nonsynonymous SNV 0.337 2 24 hm5C_associated_SNPs_99998 0 0 1 GRWD1 POSTAR2 ENCODE chr4:52943079-52943249
64251 chr7 100773845 100773845 1 + C A OV 100773841 + 100773821 100773861 41 GGCTTCATGCCCCACTTCTTCAGGCTGTTCCGGAGCACGGT GGCTTCATGCCCCACTTCTTCAGGATGTTCCGGAGCACGGT < 41bp 0.525302694567924 0.858357849960706 0.918661 0.9165516 prediction 0.666110310785565 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100773841 chr7:100773845 nonsynonymous SNV 0.932 3 25 hm5C_associated_SNPs_100000 0 0 3 RPS3 POSTAR2 ENCODE chr7:100773830-100773859
64251 chr3 42242418 42242418 1 + C A rs41289572 42242414 + 42242394 42242434 41 CCCCGGCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT CCCCGGCTCCAACCAGTCCTCGGCAATGAACTCCCTCCTGT < 41bp 0.460890310335483 0.833042860776098 0.07522118 0.18125579 prediction 0.666085721552197 Functional Gain - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42242414 chr3:42242418 synonymous SNV . 0 25 hm5C_associated_SNPs_100002 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:42242399-42242433
64251 chr12 27869255 27869255 1 + T G rs201903662 27869252 + 27869232 27869272 41 TCCTAGGACAGAGAAAATGGCTGTTGACCAGGACTGGCCTA TCCTAGGACAGAGAAAATGGCTGGTGACCAGGACTGGCCTA < 41bp 0.480054388949917 0.832806118875604 0.14534244 0.3111714 prediction 0.665612237751207 Functional Gain - MRPS35 ENSG00000061794 CDS Human protein_coding chr12:27869252 chr12:27869255 nonsynonymous SNV 0.989 1 24 hm5C_associated_SNPs_100012 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:27869221-27869277
64251 chr4 184606530 184606530 1 + T G UCS 184606527 + 184606507 184606547 41 GGCTGGCAGCAATATTTTCACAATAGGAGTACAGGACTTTG GGCTGGCAGCAATATTTTCACAAGAGGAGTACAGGACTTTG < 41bp 0.511919772728099 0.844635909914272 0.16125241 0.7272385 prediction 0.665432274372345 Functional Gain - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184606527 chr4:184606530 nonsynonymous SNV 0.985 2 24 hm5C_associated_SNPs_100016 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:184606515-184606540
64251 chr2 176988015 176988015 1 + C A rs711821 176988011 + 176987991 176988031 41 AGCGGCCCCGGCCCCCGCCACGGCCGCCTCCACCACCTCCT AGCGGCCCCGGCCCCCGCCACGGCAGCCTCCACCACCTCCT < 41bp 0.463218502351105 0.83270761927572 0.42757213 0.70594347 prediction 0.66541523855144 Functional Gain - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988011 chr2:176988015 synonymous SNV . 0 25 hm5C_associated_SNPs_100017 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:176987990-176988057
64251 chrX 100646777 100646777 1 + T G CHOL 100646774 + 100646754 100646794 41 TATGACAGGAAGCAGAGTGGCTATGGTGGGCAAACTAAGCC TATGACAGGAAGCAGAGTGGCTAGGGTGGGCAAACTAAGCC < 41bp 0.489417752024282 0.832672502944177 0.34273535 0.68723655 prediction 0.665345005888355 Functional Gain - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646774 chrX:100646777 stopgain 1.000 0 24 hm5C_associated_SNPs_100018 0 0 5 GRSF1 POSTAR2 ENCODE chrX:100646742-100646781
64251 chr7 76121562 76121562 1 + C A STAD 76121558 + 76121538 76121578 41 CAAAGCCCAGCAGAGTCCAGCAGGCGCTCGCAGGTAGGTGC CAAAGCCCAGCAGAGTCCAGCAGGAGCTCGCAGGTAGGTGC < 41bp 0.525170336159854 0.857648778459408 0.9083983 0.91401106 prediction 0.664956884599108 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76121558 chr7:76121562 nonsynonymous SNV 0.720 3 25 hm5C_associated_SNPs_100031 0 0 3 EFTUD2 POSTAR2 ENCODE chr7:76121539-76121616
64251 chr1 32502583 32502583 1 + C A GBM 32502579 + 32502559 32502599 41 TTGAATGGAGTACCTGAACCCTCTCGTGGACGTGGGGTGCC TTGAATGGAGTACCTGAACCCTCTAGTGGACGTGGGGTGCC < 41bp 0.444032788252674 0.832399346982323 0.150246 0.8949935 prediction 0.664798693964646 Functional Gain - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502579 chr1:32502583 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_100036 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:32502539-32502584
64251 chr19 41903833 41903833 1 + C A PRAD 41903829 + 41903809 41903849 41 GGCAGCCTGGGGCTCGGGGACTGGCTAGATCTGTGAGTACC GGCAGCCTGGGGCTCGGGGACTGGATAGATCTGTGAGTACC < 41bp 0.519287675195011 0.851683188621528 0.7221899 0.8702445 prediction 0.664791026853034 Functional Gain - BCKDHA ENSG00000248098 CDS Human protein_coding chr19:41903829 chr19:41903833 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_100037 0 0 2 DDX3X POSTAR2 ENCODE chr19:41903723-41903834
64251 chr6 42986253 42986253 1 + C A STAD 42986249 + 42986229 42986269 41 CTGAGGCTTGGCTGGACTGTCCCCCGACTCCAGTGCTGCCT CTGAGGCTTGGCTGGACTGTCCCCAGACTCCAGTGCTGCCT < 41bp 0.435455679332278 0.832326243619154 0.1568704 0.3345586 prediction 0.664652487238307 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42986249 chr6:42986253 nonsynonymous SNV 0.666 0 25 hm5C_associated_SNPs_100039 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr6:42986156-42986255
64251 chr7 128095938 128095938 1 + T G rs545701895 128095935 + 128095915 128095955 41 CTGGGCGGCGTTGCTCTGCGCTCTGCGGCTGACGGCGCTTT CTGGGCGGCGTTGCTCTGCGCTCGGCGGCTGACGGCGCTTT < 41bp 0.513452514350939 0.845710066820595 0.1279265 0.21364042 prediction 0.664515104939314 Functional Gain - HILPDA ENSG00000273184 ncRNA_exonic Human processed_transcript chr7:128095935 chr7:128095938 . . 0 24 hm5C_associated_SNPs_100041 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:128095938-128095939
64251 chr17 21217509 21217509 1 + C A UCEC 21217505 + 21217485 21217525 41 AACCAAGAAGACGGACATTGCTGCCTTCGTGAAGGAGATCC AACCAAGAAGACGGACATTGCTGCATTCGTGAAGGAGATCC < 41bp 0.457779300199658 0.83224272398046 0.046754867 0.05845663 prediction 0.664485447960919 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21217505 chr17:21217509 synonymous SNV . 0 25 hm5C_associated_SNPs_100044 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:21217479-21217513
64251 chr16 30196587 30196587 1 + C A SKCM 30196583 + 30196563 30196603 41 CCGCCACGTGTTTGGACAGCCGGCCAAGGCCGACCAGTGCT CCGCCACGTGTTTGGACAGCCGGCAAAGGCCGACCAGTGCT < 41bp 0.47005185522055 0.832227197239952 0.5143186 0.84116864 prediction 0.664454394479903 Functional Gain - CORO1A ENSG00000102879 CDS Human protein_coding chr16:30196583 chr16:30196587 synonymous SNV . 0 25 hm5C_associated_SNPs_100045 0 0 1 DDX3X POSTAR2 ENCODE chr16:30196555-30196621
64251 chr7 158716372 158716372 1 + T G GBM 158716369 + 158716349 158716389 41 GAAGACTCAAGGCTGCATTACTCTGTGACGCTGAGCGATGG GAAGACTCAAGGCTGCATTACTCGGTGACGCTGAGCGATGG < 41bp 0.473515283233228 0.832189855303064 0.21064603 0.29002684 prediction 0.664379710606128 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158716369 chr7:158716372 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_100049 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:158716356-158716399
64251 chr4 88035561 88035561 1 + C A PAAD 88035557 + 88035537 88035577 41 AACAAATGGCAGCTGGACAACTGGCTGACCAAAGTCAGCCA AACAAATGGCAGCTGGACAACTGGATGACCAAAGTCAGCCA < 41bp 0.540960301505307 0.873034979700345 0.09290242 0.116018385 prediction 0.664149356390077 Functional Gain - AFF1 ENSG00000172493 CDS Human protein_coding chr4:88035557 chr4:88035561 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_100051 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:88035542-88035567
64251 chrX 13753123 13753123 1 + C A rs1039829942 13753119 + 13753099 13753139 41 CCCCCTCGTCTTGGCCCCACCGCCCGGGCTGGGCACTAAAC CCCCCTCGTCTTGGCCCCACCGCCAGGGCTGGGCACTAAAC < 41bp 0.487705127703623 0.831995522388373 0.09396753 0.5329838 prediction 0.663991044776747 Functional Gain - OFD1 ENSG00000046651 UTR5 Human protein_coding chrX:13753119 chrX:13753123 . . 0 25 hm5C_associated_SNPs_100052 0 0 3 EIF3B POSTAR2 GSE65004,GSM1585667 chrX:13753081-13753124
64251 chr1 151018593 151018593 1 + C A BLCA 151018589 + 151018569 151018609 41 TTCTGGACAGCCTGGGGGAGCTGGCCCAACTCATATCCCTG TTCTGGACAGCCTGGGGGAGCTGGACCAACTCATATCCCTG < 41bp 0.451732323348352 0.831790288316868 0.1680238 0.20276877 prediction 0.663580576633737 Functional Gain - BNIPL ENSG00000163141 CDS Human protein_coding chr1:151018589 chr1:151018593 nonsynonymous SNV 0.990 2 25 hm5C_associated_SNPs_100064 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151018566-151018603
64251 chr20 55025690 55025690 1 + C A LUAD 55025686 + 55025666 55025706 41 GCAGCAGTTATATGACATACCAGCCAGCCCCAAGAAGGCAG GCAGCAGTTATATGACATACCAGCAAGCCCCAAGAAGGCAG < 41bp 0.44061766194205 0.831351962359726 0.102151334 0.09574112 prediction 0.662703924719452 Functional Gain - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55025686 chr20:55025690 synonymous SNV . 0 25 hm5C_associated_SNPs_100079 0 0 3 BUD13 POSTAR2 ENCODE chr20:55025634-55025691
64251 chr19 9492347 9492347 1 + C A LUSC 9492343 + 9492323 9492363 41 TGAGGGTACACGTGAGAACTCACACTGGAGAGAAGCCTTAT TGAGGGTACACGTGAGAACTCACAATGGAGAGAAGCCTTAT < 41bp 0.473107429131103 0.831328172028683 0.13449427 0.18596053 prediction 0.662656344057366 Functional Gain - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9492343 chr19:9492347 nonsynonymous SNV 0.286 3 25 hm5C_associated_SNPs_100080 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:9492321-9492352
64251 chr19 42795409 42795409 1 + C A HNSC 42795405 + 42795385 42795425 41 TCACCCAGGTACAGTACATCCTGCCCACGCTGCCCCAGCAG TCACCCAGGTACAGTACATCCTGCACACGCTGCCCCAGCAG < 41bp 0.450339334612466 0.831323481908272 0.1314877 0.31122363 prediction 0.662646963816544 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42795405 chr19:42795409 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_100082 0 0 1 LSM11 POSTAR2 ENCODE chr19:42795398-42795445
64251 chr14 74036526 74036526 1 + C A UCEC 74036522 + 74036502 74036542 41 GCACGAGCGCTACTTCCTCCCGCCCGGGGTGCGGCGCGAGC GCACGAGCGCTACTTCCTCCCGCCAGGGGTGCGGCGCGAGC < 41bp 0.517330490167038 0.84864503574501 0.1395204 0.75701165 prediction 0.662629091155943 Functional Gain - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74036522 chr14:74036526 synonymous SNV . 0 25 hm5C_associated_SNPs_100086 0 0 2 RPS3 POSTAR2 ENCODE chr14:74036517-74036558
64251 chr8 145745326 145745326 1 + C A SKCM 145745322 + 145745302 145745342 41 CTACAGGAGTGTGCCCACTGCAGCCGTGCCCTCCTGCAGGA CTACAGGAGTGTGCCCACTGCAGCAGTGCCCTCCTGCAGGA < 41bp 0.546888291118101 0.878001461440078 0.5902642 0.48055875 prediction 0.662226340643954 Functional Gain - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745322 chr8:145745326 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_100095 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145745301-145745326
64251 chr19 50305430 50305430 1 + C A rs528259357 50305426 + 50305406 50305446 41 CCCCTGGGCCCGGGCCCCTTCTCGCGGCCACCCCCAGGGCT CCCCTGGGCCCGGGCCCCTTCTCGAGGCCACCCCCAGGGCT < 41bp 0.483364624923598 0.831050145595732 0.50000805 0.94160914 prediction 0.662100291191464 Functional Gain - AP2A1 ENSG00000196961 intronic Human protein_coding chr19:50305426 chr19:50305430 . . 0 25 hm5C_associated_SNPs_100098 0 0 1 PRPF8 POSTAR2 ENCODE chr19:50305404-50305437
64251 chr2 70165308 70165308 1 + T G OV 70165305 + 70165285 70165325 41 AGCAGCAGCAGTGTGAGCGACTCTGACGAGCGGGGCAGCAT AGCAGCAGCAGTGTGAGCGACTCGGACGAGCGGGGCAGCAT < 41bp 0.4923255095798 0.83100449378484 0.20671016 0.5523713 prediction 0.66200898756968 Functional Gain - MXD1 ENSG00000059728 CDS Human protein_coding chr2:70165305 chr2:70165308 synonymous SNV . 0 24 hm5C_associated_SNPs_100100 0 0 5 BUD13 POSTAR2 ENCODE chr2:70165203-70165320
64251 chr10 121182770 121182770 1 + C A LGG 121182766 + 121182746 121182786 41 GCCGTGCAAAGAACTCTTTTCTGCCTGTGCACAGTAAGTGC GCCGTGCAAAGAACTCTTTTCTGCATGTGCACAGTAAGTGC < 41bp 0.440696948788633 0.830979362009118 0.24824733 0.8050443 prediction 0.661958724018237 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121182766 chr10:121182770 synonymous SNV . 0 25 hm5C_associated_SNPs_100104 0 0 1 PPIG POSTAR2 ENCODE chr10:121182709-121182779
64251 chr3 53219646 53219646 1 + C A rs201862364 53219642 + 53219622 53219662 41 AGCCTCCCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTG AGCCTCCCGGAGATCAGACTCAGCATCCTCAGAGCCTGTTG < 41bp 0.552356713705131 0.883313120811708 0.8424461 0.8920629 prediction 0.661912814213154 Functional Gain - PRKCD ENSG00000163932 CDS Human protein_coding chr3:53219642 chr3:53219646 synonymous SNV . 0 25 hm5C_associated_SNPs_100105 0 0 1 PPIG POSTAR2 ENCODE chr3:53219625-53219672
64251 chr3 42265636 42265636 1 + C A rs147114011 42265632 + 42265612 42265652 41 GCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACA GCTGGCACACCACGAGCTGTCACGAGGCACGGGTCATAACA < 41bp 0.476371210088475 0.830879905187638 0.39525706 0.3732 prediction 0.661759810375276 Functional Gain - TRAK1 ENSG00000182606 UTR3 Human protein_coding chr3:42265632 chr3:42265636 . . 0 25 hm5C_associated_SNPs_100107 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:42265603-42265646
64251 chr7 75508485 75508485 1 + C A ACC 75508481 + 75508461 75508501 41 ACCTTCTTCACTGCGCTGCTCTCGCTGCTGGTTTCCGGGCC ACCTTCTTCACTGCGCTGCTCTCGATGCTGGTTTCCGGGCC < 41bp 0.523000982858005 0.853759945557414 0.21859848 0.9290034 prediction 0.661517925398819 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75508481 chr7:75508485 nonsynonymous SNV 0.960 4 25 hm5C_associated_SNPs_100112 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917664 chr7:75508472-75508510
64251 chr20 21367621 21367621 1 + C A GBM 21367617 + 21367597 21367637 41 GGGCCTGGTGGGTATCCACCCAGACGAGATGATCGTGGAGG GGGCCTGGTGGGTATCCACCCAGAAGAGATGATCGTGGAGG < 41bp 0.460524014972304 0.830753654384676 0.4613579 0.75566196 prediction 0.661507308769353 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21367617 chr20:21367621 synonymous SNV . 0 25 hm5C_associated_SNPs_100113 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:21367608-21367627
64251 chr3 12859112 12859112 1 + C A UCEC 12859108 + 12859088 12859128 41 GCCGTGTGGGTGCTGGCAGCCTGCCCGACTTCCTGCCCTTC GCCGTGTGGGTGCTGGCAGCCTGCACGACTTCCTGCCCTTC < 41bp 0.448911142265778 0.830684252724467 0.118104905 0.12211293 prediction 0.661368505448934 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12859108 chr3:12859112 nonsynonymous SNV 0.991 2 25 hm5C_associated_SNPs_100118 0 0 1 RBM15 POSTAR2 ENCODE chr3:12859089-12859135
64251 chr1 116946585 116946585 1 + C A HNSC 116946581 + 116946561 116946601 41 GAAGTCAGAAAACTCATCATCAGGCGACGCCCTGGCGGTAA GAAGTCAGAAAACTCATCATCAGGAGACGCCCTGGCGGTAA < 41bp 0.543655760609532 0.874247779531578 0.9137724 0.9238237 prediction 0.661184037844093 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116946581 chr1:116946585 synonymous SNV . 0 25 hm5C_associated_SNPs_100120 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116946553-116946593
64251 chr1 192780844 192780844 1 + C A rs76763381 192780840 + 192780820 192780860 41 CCTGGGTGTTCAGGAAACATCACTCAGAACTATTGATTCAA CCTGGGTGTTCAGGAAACATCACTAAGAACTATTGATTCAA < 41bp 0.522077427993357 0.852570191431534 0.06406748 0.11892995 prediction 0.660985526876354 Functional Gain - RGS2 ENSG00000116741 UTR3 Human protein_coding chr1:192780840 chr1:192780844 . . 0 25 hm5C_associated_SNPs_100123 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr1:192780833-192780862
64251 chr9 123888093 123888093 1 + C A BRCA 123888089 + 123888069 123888109 41 CCATTAAAGGCCAGGCAACTCAGGCCCAGAATGAGTGCAGG CCATTAAAGGCCAGGCAACTCAGGACCAGAATGAGTGCAGG < 41bp 0.531374954700974 0.86166661688686 0.40674022 0.78760064 prediction 0.660583324371773 Functional Gain - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123888089 chr9:123888093 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_100133 0 0 3 AARS POSTAR2 ENCODE chr9:123888046-123888096
64251 chr8 97847387 97847387 1 + T G LUAD 97847384 + 97847364 97847404 41 TTTGGCATCTCTCATTCGATCCGTGGCCTCCTTCTCCATCT TTTGGCATCTCTCATTCGATCCGGGGCCTCCTTCTCCATCT < 41bp 0.486339468928023 0.830199842036393 0.023780584 0.91208553 prediction 0.660399684072787 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97847384 chr8:97847387 nonsynonymous SNV 0.964 3 24 hm5C_associated_SNPs_100137 0 0 2 SND1 POSTAR2 ENCODE chr8:97847364-97847407
64251 chr8 81399527 81399527 1 + T G rs185916023 81399524 + 81399504 81399544 41 CAATGGGCGAGGGCCGGCGACTGTGGATCTGGAGCTGGACG CAATGGGCGAGGGCCGGCGACTGGGGATCTGGAGCTGGACG < 41bp 0.513329535499599 0.843522271855594 0.3478272 0.7802168 prediction 0.66038547271199 Functional Gain - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399524 chr8:81399527 nonsynonymous SNV 0.990 1 24 hm5C_associated_SNPs_100138 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr8:81399498-81399550
64251 chr11 57569598 57569598 1 + T G UCEC 57569595 + 57569575 57569615 41 AACAAGATTGCCATAAAAAACTGTGATGGTGTGCCTGCCCT AACAAGATTGCCATAAAAAACTGGGATGGTGTGCCTGCCCT < 41bp 0.494416305808065 0.830179001146542 0.44891107 0.88768744 prediction 0.660358002293084 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57569595 chr11:57569598 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_100139 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:57569560-57569600
64251 chr12 108961025 108961025 1 + C A THCA 108961021 + 108961001 108961041 41 CGCCAAGGAGCTCTGCCTTCCTCCCGTGAAACTGCACTGCT CGCCAAGGAGCTCTGCCTTCCTCCAGTGAAACTGCACTGCT < 41bp 0.568633064637963 0.898739487007121 0.27941638 0.96362114 prediction 0.660212844738317 Functional Gain - ISCU ENSG00000136003 CDS Human protein_coding chr12:108961021 chr12:108961025 synonymous SNV . 0 25 hm5C_associated_SNPs_100144 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:108960994-108961026
64251 chr4 151504465 151504465 1 + C A HNSC 151504461 + 151504441 151504481 41 ACTTCGTGGACGACGGCTCGCTGCCCGGCTGCGCAGTGCTC ACTTCGTGGACGACGGCTCGCTGCACGGCTGCGCAGTGCTC < 41bp 0.544775566581062 0.874822146984812 0.004209012 0.013323456 prediction 0.660093160807501 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504461 chr4:151504465 nonsynonymous SNV 0.968 4 25 hm5C_associated_SNPs_100147 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585672 chr4:151504442-151504486
64251 chr19 55670569 55670569 1 - G T UCEC 55670573 - 55670553 55670593 41 CAGCCCTTGAGGGCCTGACCCAGCCTCTGCAGGGTGGGACC CAGCCCTTGAGGGCCTGACCCAGCATCTGCAGGGTGGGACC < 41bp 0.540177458505625 0.870108892967276 0.33473194 0.36895412 prediction 0.659862868923302 Functional Gain - DNAAF3 ENSG00000167646;ENSG00000267110 CDS Human other chr19:55670573 chr19:55670569 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_100156 0 0 1 UPF1 POSTAR2 ENCODE chr19:55670540-55670592
64251 chr17 73821373 73821373 1 + C A rs183263103 73821369 + 73821349 73821389 41 GGTACTCATTCTATGACCACCGCCCCCAACCAGCTGCCCCC GGTACTCATTCTATGACCACCGCCACCAACCAGCTGCCCCC < 41bp 0.488913171040435 0.829854293873661 0.15714395 0.17322442 prediction 0.659708587747322 Functional Gain - UNK ENSG00000132478 UTR3 Human protein_coding chr17:73821369 chr17:73821373 . . 0 25 hm5C_associated_SNPs_100158 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:73821360-73821416
64251 chr12 12870962 12870962 1 + T G UCEC 12870959 + 12870939 12870979 41 AGCCAGCGCAAGTGGAATTTCGATTTTCAGAATCACAAACC AGCCAGCGCAAGTGGAATTTCGAGTTTCAGAATCACAAACC < 41bp 0.481657317851747 0.829833096850663 0.23678803 0.45931676 prediction 0.659666193701326 Functional Gain - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12870959 chr12:12870962 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_100160 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr12:12870960-12870980
64251 chr1 11345764 11345764 1 + C A UCEC 11345760 + 11345740 11345780 41 TCCTCATCACTTTTGGCCCGCTGGCTGTGATGTTCGCCTAC TCCTCATCACTTTTGGCCCGCTGGATGTGATGTTCGCCTAC < 41bp 0.532771664946376 0.862541134165687 0.15840405 0.4542258 prediction 0.659538938438622 Functional Gain - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11345760 chr1:11345764 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_100164 0 0 2 RBM15 POSTAR2 ENCODE chr1:11345747-11345802
64251 chr3 33840424 33840424 1 + C A UCEC 33840420 + 33840400 33840440 41 GCACGAGGGCGCGCTCGAGACGCTCCTGAGGTGGGCGCGGG GCACGAGGGCGCGCTCGAGACGCTACTGAGGTGGGCGCGGG < 41bp 0.522249024161467 0.852003601298298 0.34381872 0.84802413 prediction 0.659509154273662 Functional Gain - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33840420 chr3:33840424 synonymous SNV . 0 25 hm5C_associated_SNPs_100166 0 0 4 FXR2 POSTAR2 ENCODE chr3:33840381-33840430
64251 chr20 4158129 4158129 1 + C A UCEC 4158125 + 4158105 4158145 41 GAACGCAGCGTGGGCCGCATCAGCCTCTATTCCAAGAATGG GAACGCAGCGTGGGCCGCATCAGCATCTATTCCAAGAATGG < 41bp 0.444170846655399 0.829731609416806 0.048488706 0.22548321 prediction 0.659463218833612 Functional Gain - SMOX ENSG00000088826 CDS Human protein_coding chr20:4158125 chr20:4158129 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_100167 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:4158122-4158146
64251 chr1 162325137 162325137 1 + C A UCEC 162325133 + 162325113 162325153 41 GAAGGAAGGAGGCTCTCACACAGGCTCCAAGGTAGGCAAGA GAAGGAAGGAGGCTCTCACACAGGATCCAAGGTAGGCAAGA < 41bp 0.505028804066491 0.834668703437584 0.80721617 0.8460535 prediction 0.659279798742186 Functional Gain - NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162325133 chr1:162325137 synonymous SNV . 0 25 hm5C_associated_SNPs_100171 0 0 4 BUD13 POSTAR2 ENCODE chr1:162325102-162325181
64251 chr11 73103329 73103329 1 + T G BRCA 73103327 + 73103307 73103347 41 GCGGTGGTGAGACACGGCAGCCTGGGAACGGCACCCGGGCA GCGGTGGTGAGACACGGCAGCCGGGGAACGGCACCCGGGCA < 41bp 0.499865823180407 0.829620527060678 0.44129008 0.9100292 prediction 0.659241054121356 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73103327 chr11:73103329 synonymous SNV . 0 23 hm5C_associated_SNPs_100172 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:73103304-73103330
64251 chr1 46740345 46740345 1 + C A LUAD 46740341 + 46740321 46740361 41 GAACAAGCCATGGCCCGGGTCTGGCGAGATGGTCAAAAGAA GAACAAGCCATGGCCCGGGTCTGGAGAGATGGTCAAAAGAA < 41bp 0.456135458833463 0.829461658779608 0.24971959 0.293548 prediction 0.658923317559216 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46740341 chr1:46740345 synonymous SNV . 0 25 hm5C_associated_SNPs_100179 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:46740298-46740353
64251 chr3 39431056 39431056 1 + C A UCEC 39431052 + 39431032 39431072 41 CCTGCTCTACCCTCCTTTTCCAACCTCTGGATCTCCTTAAA CCTGCTCTACCCTCCTTTTCCAACATCTGGATCTCCTTAAA < 41bp 0.443886373870288 0.829390655098616 0.3610378 0.24345791 prediction 0.658781310197232 Functional Gain - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39431052 chr3:39431056 nonsynonymous SNV 0.986 5 25 hm5C_associated_SNPs_100181 0 0 1 YBX3 POSTAR2 ENCODE chr3:39431003-39431060
64251 chr6 167708138 167708138 1 + C A OV 167708134 + 167708114 167708154 41 GCTGCAAGGGGACCATCATCCTCTCCATGTGTGGCTACGTG GCTGCAAGGGGACCATCATCCTCTACATGTGTGGCTACGTG < 41bp 0.435136182077503 0.829362426098562 0.9473961 0.92209256 prediction 0.658724852197124 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167708134 chr6:167708138 nonsynonymous SNV 0.905 4 25 hm5C_associated_SNPs_100183 0 0 1 NOL12 POSTAR2 ENCODE chr6:167708135-167708185
64251 chr2 61149451 61149451 1 + C A LUAD 61149447 + 61149427 61149467 41 GTCCTCTTCCAGTATGTCAGCAGGCGCCAATTCCAATACTA GTCCTCTTCCAGTATGTCAGCAGGAGCCAATTCCAATACTA < 41bp 0.510926352685651 0.840281577459105 0.58162457 0.727956 prediction 0.658710449546908 Functional Gain - REL ENSG00000162924 CDS Human protein_coding chr2:61149447 chr2:61149451 synonymous SNV . 0 25 hm5C_associated_SNPs_100184 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:61149450-61149476
64251 chr19 46173898 46173898 1 + C A UCEC 46173894 + 46173874 46173914 41 CCCTTCTTTCTTTTCCTAGACAGGCTCTAAGGGGCAGACGG CCCTTCTTTCTTTTCCTAGACAGGATCTAAGGGGCAGACGG < 41bp 0.534286952714068 0.863635421569668 0.2515763 0.5407882 prediction 0.6586969377112 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46173894 chr19:46173898 synonymous SNV . 0 25 hm5C_associated_SNPs_100186 0 0 10 DDX24 POSTAR2 ENCODE chr19:46173895-46173928
64251 chr17 32956131 32956131 1 + C A LUSC 32956127 + 32956107 32956147 41 AGGATCATGTGGCACATTGACTACCGTGGCCACGGCGCCCT AGGATCATGTGGCACATTGACTACAGTGGCCACGGCGCCCT < 41bp 0.567179672570226 0.896518516979699 0.20785695 0.85099244 prediction 0.658677688818946 Functional Gain - TMEM132E ENSG00000181291 CDS Human protein_coding chr17:32956127 chr17:32956131 nonsynonymous SNV 0.965 2 25 hm5C_associated_SNPs_100188 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:32956109-32956141
64251 chr5 177637903 177637903 1 + C A rs187811984 177637899 + 177637879 177637919 41 GTGGGAGGCTCTGCTTCCTGCTGCCGCTCTGCAGCCTGGAC GTGGGAGGCTCTGCTTCCTGCTGCAGCTCTGCAGCCTGGAC < 41bp 0.478555007457578 0.829331282484337 0.3152118 0.3783213 prediction 0.658662564968673 Functional Gain - HNRNPAB ENSG00000197451 UTR3 Human protein_coding chr5:177637899 chr5:177637903 . . 0 25 hm5C_associated_SNPs_100189 0 0 55 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:177637697-177637957
64251 chr2 63283987 63283987 1 + C A rs187464743 63283983 + 63283963 63284003 41 CCCTCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGG CCCTCGATTTTGCTCCACGCCTGCAGGCCAGAGCCTCCCGG < 41bp 0.534795392683891 0.863995629205791 0.16136342 0.24096414 prediction 0.658400473043799 Functional Gain - OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63283983 chr2:63283987 . . 0 25 hm5C_associated_SNPs_100191 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:63283980-63284000
64251 chr18 11882545 11882545 1 + C A rs190236242 11882541 + 11882521 11882561 41 CCAAAAATACAAAAATTAGCCAGGCGTGGTGGCGGGCACCT CCAAAAATACAAAAATTAGCCAGGAGTGGTGGCGGGCACCT < 41bp 0.501810807972037 0.830985498108537 0.77009046 0.839377 prediction 0.658349380273001 Functional Gain - GNAL ENSG00000141404 UTR3 Human protein_coding chr18:11882541 chr18:11882545 . . 0 25 hm5C_associated_SNPs_100193 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr18:11882544-11882545
64251 chr12 112924299 112924299 1 + C A ESCA 112924295 + 112924275 112924315 41 CCAGGGGAATACGGAGAGAACGGTCTGGCAATACCACTTTC CCAGGGGAATACGGAGAGAACGGTATGGCAATACCACTTTC < 41bp 0.45176892063209 0.829128293245431 0.37179613 0.3236432 prediction 0.658256586490862 Functional Gain - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112924295 chr12:112924299 synonymous SNV . 0 25 hm5C_associated_SNPs_100196 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr12:112924280-112924300
64251 chr17 7320563 7320563 1 + C A SARC 7320559 + 7320539 7320579 41 CCCGCCGCCTGCCACCCTGCCTCCCGAGCCCGAGCCCGAGC CCCGCCGCCTGCCACCCTGCCTCCAGAGCCCGAGCCCGAGC < 41bp 0.451668338290008 0.829094369625728 0.08884442 0.94680214 prediction 0.658188739251455 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320559 chr17:7320563 synonymous SNV . 0 25 hm5C_associated_SNPs_100200 0 0 1 EIF3H POSTAR2 ENCODE chr17:7320499-7320589
64251 chr16 88779068 88779068 1 + C A UCEC 88779064 + 88779044 88779084 41 ACCGTCGGTGCTTTGGTGCTCTGCCCAGGAGCTGGTGGGAT ACCGTCGGTGCTTTGGTGCTCTGCACAGGAGCTGGTGGGAT < 41bp 0.452631035719793 0.829038918252569 0.14071172 0.5977987 prediction 0.658077836505138 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779064 chr16:88779068 synonymous SNV . 0 25 hm5C_associated_SNPs_100207 0 0 2 BUD13 POSTAR2 ENCODE chr16:88779032-88779110
64251 chr8 17125809 17125809 1 + T G KIRC 17125806 + 17125786 17125826 41 CCTCAGGAAAAACCAGTGATCAGTGTTTATCCACCAATACG CCTCAGGAAAAACCAGTGATCAGGGTTTATCCACCAATACG < 41bp 0.530149745168014 0.859053116488869 0.24019128 0.9547322 prediction 0.65780674264171 Functional Gain - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17125806 chr8:17125809 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_100212 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr8:17125780-17125820
64251 chr6 121769060 121769060 1 + T G BLCA 121769057 + 121769037 121769077 41 TGCTGGACATGAATTACAGCCACTAGCCATTGTGGACCAGC TGCTGGACATGAATTACAGCCACGAGCCATTGTGGACCAGC < 41bp 0.488780291171434 0.828815170634045 0.005921364 0.022102207 prediction 0.657630341268091 Functional Gain - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121769057 chr6:121769060 nonsynonymous SNV 0.919 4 24 hm5C_associated_SNPs_100217 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:121769040-121769100
64251 chr17 19999983 19999983 1 + C A UCEC 19999979 + 19999959 19999999 41 TCAAGCATGCGGAGTGCAGCCAAGCCCTGGAACCCAGCCAT TCAAGCATGCGGAGTGCAGCCAAGACCTGGAACCCAGCCAT < 41bp 0.536613191905589 0.865329846026587 0.34262595 0.33599937 prediction 0.657433308241997 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:19999979 chr17:19999983 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_100222 0 0 1 ZNF622 POSTAR2 ENCODE chr17:19999942-20000002
64251 chr1 52246899 52246899 1 + C A SARC 52246895 + 52246875 52246915 41 GGTTGTGAAATGGTACCTCTCAGCCTTTCATGCGGGAAGGA GGTTGTGAAATGGTACCTCTCAGCATTTCATGCGGGAAGGA < 41bp 0.54773444377782 0.876433945107285 0.7575951 0.33014715 prediction 0.657399002658929 Functional Gain - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52246895 chr1:52246899 synonymous SNV . 0 25 hm5C_associated_SNPs_100224 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:52246878-52246916
64251 chr16 1559927 1559927 1 + C A rs375348828 1559923 + 1559903 1559943 41 TCAAGAACAGGCTCCTCCCACCCGCGTCTCCCTAGTCCCTG TCAAGAACAGGCTCCTCCCACCCGAGTCTCCCTAGTCCCTG < 41bp 0.477973494854593 0.828595970215984 0.13768631 0.09489113 prediction 0.657191940431968 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1559923 chr16:1559927 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_100231 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1559920-1559940
64251 chr4 115544771 115544771 1 + C A rs61733375 115544767 + 115544747 115544787 41 CAGCCTGTGGATGCTGTGTACTGACGTAGCACTGGAATTCC CAGCCTGTGGATGCTGTGTACTGAAGTAGCACTGGAATTCC < 41bp 0.444536555844213 0.828583783609325 0.16301957 0.23585695 prediction 0.65716756721865 Functional Gain - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115544767 chr4:115544771 nonsynonymous SNV 0.928 3 25 hm5C_associated_SNPs_100232 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:115544771-115544772
64251 chr1 151238020 151238020 1 + C A UCEC 151238016 + 151237996 151238036 41 TTGGCTGGTGAAGGTGGTGCCATGCTGGGTCTTGGTGCCAG TTGGCTGGTGAAGGTGGTGCCATGATGGGTCTTGGTGCCAG < 41bp 0.457054716102773 0.828563457996046 0.07744005 0.17253941 prediction 0.657126915992093 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151238016 chr1:151238020 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_100233 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr1:151237948-151238044
64251 chr16 839581 839581 1 + C A rs199581615 839577 + 839557 839597 41 GCTGCTGCCGACGTGGGTCTCACACGGGCCTCACCAGCTGC GCTGCTGCCGACGTGGGTCTCACAAGGGCCTCACCAGCTGC < 41bp 0.48204351641455 0.828559577841601 0.08555278 0.23728293 prediction 0.657119155683201 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:839577 chr16:839581 synonymous SNV . 0 25 hm5C_associated_SNPs_100235 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:839546-839591
64251 chr1 86048693 86048693 1 + C A UCEC 86048689 + 86048669 86048709 41 GAAGCAGCGTTTCCCTTCTACAGGCTGTTCAATGACATTCA GAAGCAGCGTTTCCCTTCTACAGGATGTTCAATGACATTCA < 41bp 0.463578105050122 0.828474748337177 0.09663656 0.09254202 prediction 0.656949496674353 Functional Gain - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86048689 chr1:86048693 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_100240 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr1:86048560-86048760
64251 chrX 153608120 153608120 1 + C A rs782051850 153608116 + 153608096 153608136 41 CCAGAGGCGGCGGCTCTCGCCCCCCAGCTCGTCCGCCGCCT CCAGAGGCGGCGGCTCTCGCCCCCAAGCTCGTCCGCCGCCT < 41bp 0.426772454740811 0.828264707537309 0.07372445 0.22168753 prediction 0.656529415074617 Functional Gain - EMD ENSG00000102119 CDS Human protein_coding chrX:153608116 chrX:153608120 synonymous SNV . 0 25 hm5C_associated_SNPs_100250 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr19 35504178 35504178 1 + C A SARC 35504174 + 35504154 35504194 41 CCCCAGACGCTGAGTCCCCGCGAGCTCTGGCACCTGGTGCA CCCCAGACGCTGAGTCCCCGCGAGATCTGGCACCTGGTGCA < 41bp 0.471333616691175 0.828177659522337 0.71288633 0.90514076 prediction 0.656355319044674 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35504174 chr19:35504178 nonsynonymous SNV 0.979 3 25 hm5C_associated_SNPs_100256 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr19:35504162-35504192
64251 chr22 19484966 19484966 1 + C A LGG 19484962 + 19484942 19484982 41 CTGTCCAAGGACCTGAATGACATGCTGTGGTACGTAGCCCC CTGTCCAAGGACCTGAATGACATGATGTGGTACGTAGCCCC < 41bp 0.445191641253092 0.828139248309622 0.3361451 0.23925325 prediction 0.656278496619244 Functional Gain - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19484962 chr22:19484966 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_100258 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:19484923-19484974
64251 chr12 110032905 110032905 1 + C A LIHC 110032901 + 110032881 110032921 41 CACGCCTCTCTGGACCAGCTCTGCCAGGTGACCAGGGCCCG CACGCCTCTCTGGACCAGCTCTGCAAGGTGACCAGGGCCCG < 41bp 0.433057354906495 0.828108129721972 0.056435287 0.18942627 prediction 0.656216259443945 Functional Gain - MVK ENSG00000110921 CDS Human protein_coding chr12:110032901 chr12:110032905 nonsynonymous SNV 0.983 2 25 hm5C_associated_SNPs_100260 0 0 2 BUD13 POSTAR2 ENCODE chr12:110032857-110032923
64251 chr16 8722946 8722946 1 + C A STAD 8722942 + 8722922 8722962 41 CTGGGAGAGGAAGCACAAGGCAGCCCGCACGATATCATCAG CTGGGAGAGGAAGCACAAGGCAGCACGCACGATATCATCAG < 41bp 0.452264746277519 0.828004320623139 0.36485997 0.37871554 prediction 0.656008641246279 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722942 chr16:8722946 nonsynonymous SNV 0.026 0 25 hm5C_associated_SNPs_100268 0 0 5 BUD13 POSTAR2 ENCODE chr16:8722862-8722981
64251 chr17 43226810 43226810 1 + C A UCEC 43226806 + 43226786 43226826 41 CAGGCCTGTCCAGAATCTAGCTGCCTGAGAGAGGGCGAGAA CAGGCCTGTCCAGAATCTAGCTGCATGAGAGAGGGCGAGAA < 41bp 0.456836778865838 0.828003892426701 0.4906318 0.5471583 prediction 0.656007784853403 Functional Gain - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226806 chr17:43226810 nonsynonymous SNV 0.008 0 25 hm5C_associated_SNPs_100269 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:43226800-43226820
64251 chr1 22816684 22816684 1 + C A UCEC 22816680 + 22816660 22816700 41 CTTGTTGGAAATGATGTACACGGGCAAACTACCTGTGGGCA CTTGTTGGAAATGATGTACACGGGAAAACTACCTGTGGGCA < 41bp 0.459665040746949 0.827999304941332 0.41805273 0.62856734 prediction 0.655998609882665 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22816680 chr1:22816684 synonymous SNV . 0 25 hm5C_associated_SNPs_100270 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:22816675-22816698
64251 chr15 39881465 39881465 1 + C A LUSC 39881461 + 39881441 39881481 41 AGAGCACCGGTGTGAGAACACGGACCCCGGCTACAACTGCC AGAGCACCGGTGTGAGAACACGGAACCCGGCTACAACTGCC < 41bp 0.445600411965109 0.827930632009716 0.36688417 0.40463394 prediction 0.655861264019433 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39881461 chr15:39881465 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_100272 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:39881456-39881512
64251 chr12 113376452 113376452 1 + C A rs1859329 113376448 + 113376428 113376468 41 CGCTCTGGGCGCCCTGGCCGCTGCCCTGAGGGAGCGCGGGG CGCTCTGGGCGCCCTGGCCGCTGCACTGAGGGAGCGCGGGG < 41bp 0.474826012553155 0.827866788711764 0.2616979 0.41062722 prediction 0.655733577423529 Functional Gain - OAS3 ENSG00000111331 CDS Human protein_coding chr12:113376448 chr12:113376452 synonymous SNV . 0 25 hm5C_associated_SNPs_100274 0 0 1 DDX3X POSTAR2 ENCODE chr12:113376430-113376502
64251 chr16 30096088 30096088 1 + C A COAD 30096084 + 30096064 30096104 41 GCCAATGACATTGACATGATCTGCCGTGCCCACCAACTGGT GCCAATGACATTGACATGATCTGCAGTGCCCACCAACTGGT < 41bp 0.559948517586833 0.887804698584584 0.14233506 0.2853154 prediction 0.655712361995503 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096084 chr16:30096088 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_100275 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:30096040-30096100
64251 chr16 107275 107275 1 + T G rs1045001 107272 + 107252 107292 41 CTCACCCCAGGCATGCCCAACAGTAACTGTCAGCATAAACC CTCACCCCAGGCATGCCCAACAGGAACTGTCAGCATAAACC < 41bp 0.488833912630212 0.827719121083494 0.08852413 0.6504049 prediction 0.655438242166988 Functional Gain - SNRNP25 ENSG00000161981 UTR3 Human protein_coding chr16:107272 chr16:107275 . . 0 24 hm5C_associated_SNPs_100281 0 0 5 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr16:107260-107280
64251 chr7 128843398 128843398 1 + T G STAD 128843395 + 128843375 128843415 41 GGGGCTGGCCTGACTTCCTGCGCTGCACTCCTGACCGCTTC GGGGCTGGCCTGACTTCCTGCGCGGCACTCCTGACCGCTTC < 41bp 0.459574295363851 0.827426802110068 0.17766866 0.35730958 prediction 0.654853604220136 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128843395 chr7:128843398 nonsynonymous SNV 0.994 5 24 hm5C_associated_SNPs_100290 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:128843386-128843407
64251 chr15 45694610 45694610 1 + C A rs1365610 45694606 + 45694586 45694626 41 GTTTCCTAATCTGGTTTCGTCTGCCTGGTTCATCTGTGTGC GTTTCCTAATCTGGTTTCGTCTGCATGGTTCATCTGTGTGC < 41bp 0.506457375364173 0.833865221723651 0.22044939 0.4305248 prediction 0.654815692718955 Functional Gain - SPATA5L1 ENSG00000171763 UTR5 Human protein_coding chr15:45694606 chr15:45694610 . . 0 25 hm5C_associated_SNPs_100293 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:45694594-45694621
64251 chr15 90119120 90119120 1 + C A rs200014273 90119116 + 90119096 90119136 41 GGCGCCCAGGGCCACCCACACGCACGGCGCCCTGATGGAGA GGCGCCCAGGGCCACCCACACGCAAGGCGCCCTGATGGAGA < 41bp 0.454339752894253 0.827378116479198 0.17265487 0.22371393 prediction 0.654756232958395 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90119116 chr15:90119120 nonsynonymous SNV 0.975 0 25 hm5C_associated_SNPs_100295 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:90119119-90119142
64251 chr1 220971285 220971285 1 + C A OV 220971281 + 220971261 220971301 41 TCGCTGGCGGATCTCAACTCCAGGCTAGAGAAGAAAGTTAA TCGCTGGCGGATCTCAACTCCAGGATAGAGAAGAAAGTTAA < 41bp 0.441607517914467 0.827261921153551 0.8789959 0.74520516 prediction 0.654523842307102 Functional Gain - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220971281 chr1:220971285 nonsynonymous SNV 0.945 1 25 hm5C_associated_SNPs_100300 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:220971249-220971286
64251 chr1 44128655 44128655 1 + C A LUAD 44128651 + 44128631 44128671 41 ATCACCATTGAGGGTGTGAACACCCCATACCTGTACTTTGG ATCACCATTGAGGGTGTGAACACCACATACCTGTACTTTGG < 41bp 0.435961410057129 0.827084888532093 0.21788958 0.19232717 prediction 0.654169777064186 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44128651 chr1:44128655 nonsynonymous SNV 0.963 4 25 hm5C_associated_SNPs_100305 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:44128639-44128738
64251 chr16 2653507 2653507 1 + C A rs539309048 2653503 + 2653483 2653523 41 ATCACTGCGAGCTCCTGCCGCTGGCCCGTGGCAGGCTCGGG ATCACTGCGAGCTCCTGCCGCTGGACCGTGGCAGGCTCGGG < 41bp 0.514773119215712 0.841826257876311 0.34248462 0.24542111 prediction 0.654106277321197 Functional Gain - LOC652276 ENSG00000215154 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:2653503 chr16:2653507 . . 0 25 hm5C_associated_SNPs_100307 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:2653506-2653507
64251 chr19 863160 863160 1 + T G UCEC 863157 + 863137 863177 41 GTGGTCACCTCGGGCTCGCGCGTTTGCGGCAACCGCAAGAA GTGGTCACCTCGGGCTCGCGCGTGTGCGGCAACCGCAAGAA < 41bp 0.475500184756882 0.82704623596861 0.7064155 0.84468544 prediction 0.654092471937221 Functional Gain - CFD ENSG00000197766 CDS Human protein_coding chr19:863157 chr19:863160 synonymous SNV . 0 24 hm5C_associated_SNPs_100309 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:863140-863164
64251 chr10 104678309 104678309 1 + T G SKCM 104678306 + 104678286 104678326 41 CAGGCAGCCGCCGCACTGCCCACTTGGAAGATGGCGGCGCG CAGGCAGCCGCCGCACTGCCCACGTGGAAGATGGCGGCGCG < 41bp 0.521545947550579 0.848591651745516 0.047778815 0.48988572 prediction 0.654091408389873 Functional Gain - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104678306 chr10:104678309 synonymous SNV . 0 24 hm5C_associated_SNPs_100310 0 0 1 EIF3H POSTAR2 ENCODE chr10:104678275-104678311
64251 chr10 101439612 101439612 1 + C A READ 101439608 + 101439588 101439628 41 TCTTTACATCCTCTGCACAGCAGGCATGAGGCTTCTCCCTG TCTTTACATCCTCTGCACAGCAGGAATGAGGCTTCTCCCTG < 41bp 0.544512111653953 0.871508268068684 0.3772407 0.5687467 prediction 0.653992312829461 Functional Gain - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101439608 chr10:101439612 synonymous SNV . 0 25 hm5C_associated_SNPs_100312 0 0 2 PRPF8 POSTAR2 ENCODE chr10:101439595-101439671
64251 chr16 56868102 56868102 1 + C A CESC 56868098 + 56868078 56868118 41 CTGAACTTCGTGCGGCTCCTCATGCTGTACACCCGGAAGTT CTGAACTTCGTGCGGCTCCTCATGATGTACACCCGGAAGTT < 41bp 0.450994077486442 0.826978129584942 0.06443921 0.24201238 prediction 0.653956259169884 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56868098 chr16:56868102 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_100316 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr16:56868084-56868107
64251 chr17 37898897 37898897 1 + C A UCEC 37898893 + 37898873 37898913 41 CTTCCCTGAGCTCTGCAGTCCTCCCTCACAGAGCCCAATTC CTTCCCTGAGCTCTGCAGTCCTCCATCACAGAGCCCAATTC < 41bp 0.419903000452751 0.826868888452199 0.20373121 0.9710184 prediction 0.653737776904399 Functional Gain - GRB7 ENSG00000141738 CDS Human protein_coding chr17:37898893 chr17:37898897 synonymous SNV . 0 25 hm5C_associated_SNPs_100317 0 0 2 DDX59 POSTAR2 ENCODE chr17:37898874-37898930
64251 chr13 113770092 113770092 1 + C A rs6040 113770088 + 113770068 113770108 41 CGAGGGGTACTCTCTGCTGGCAGACGGGGTGTCCTGCACAC CGAGGGGTACTCTCTGCTGGCAGAAGGGGTGTCCTGCACAC < 41bp 0.547403593947687 0.874222659348511 0.8730723 0.8899038 prediction 0.653638130801648 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113770088 chr13:113770092 nonsynonymous SNV 0.018 5 25 hm5C_associated_SNPs_100321 0 0 2 BUD13 POSTAR2 ENCODE chr13:113769926-113770121
64251 chr17 1648635 1648635 1 + C A rs185025710 1648631 + 1648611 1648651 41 TTGCTCCTTTCCGCAGCTAACTAGCGGGCCGAACCAGGAGC TTGCTCCTTTCCGCAGCTAACTAGAGGGCCGAACCAGGAGC < 41bp 0.459288227449641 0.826794638685193 0.39234835 0.60669047 prediction 0.653589277370386 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1648631 chr17:1648635 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_100323 0 0 6 DDX3X POSTAR2 ENCODE chr17:1648626-1648674
64251 chr10 71868902 71868902 1 + C A UCEC 71868898 + 71868878 71868918 41 CTTGAAGAGACCATCAAAAACTGCCTGTCAGCGGCGGAGGA CTTGAAGAGACCATCAAAAACTGCATGTCAGCGGCGGAGGA < 41bp 0.572968837449858 0.899733446583407 0.07473999 0.087672085 prediction 0.653529218267098 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71868898 chr10:71868902 nonsynonymous SNV 0.958 4 25 hm5C_associated_SNPs_100327 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:71868881-71868908
64251 chr10 60560042 60560042 1 + C A GBM 60560038 + 60560018 60560058 41 ATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAG ATCACGGGGATCCGTCCATCCAGAAAAGTGGGTCTGAGCAG < 41bp 0.440859421365867 0.826653374827365 0.34688497 0.41180354 prediction 0.65330674965473 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60560038 chr10:60560042 nonsynonymous SNV 0.129 2 25 hm5C_associated_SNPs_100331 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60559991-60560054
64251 chr5 34808710 34808710 1 + C A THCA 34808706 + 34808686 34808726 41 CAGCGGCTCAGGGCTGCCTTCAAGCTGTGCAGATTCTCTGC CAGCGGCTCAGGGCTGCCTTCAAGATGTGCAGATTCTCTGC < 41bp 0.448663801759541 0.82662929293804 0.39036497 0.3332221 prediction 0.65325858587608 Functional Gain - RAI14 ENSG00000039560 CDS Human protein_coding chr5:34808706 chr5:34808710 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_100332 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:34808706-34808730
64251 chr5 23527761 23527761 1 + C A LUAD 23527757 + 23527737 23527777 41 TCCTCAGACACCAGAGGACACACACAGGGGAGAAGCCCTAC TCCTCAGACACCAGAGGACACACAAAGGGGAGAAGCCCTAC < 41bp 0.437155232081216 0.826585835273241 0.0057427585 0.055976152 prediction 0.653171670546482 Functional Gain - PRDM9 ENSG00000164256 CDS Human protein_coding chr5:23527757 chr5:23527761 nonsynonymous SNV 0.393 1 25 hm5C_associated_SNPs_100335 0 0 1 LIN28B POSTAR2 ENCODE chr5:23527758-23527827
64251 chr10 12139731 12139731 1 + C A rs80324702 12139727 + 12139707 12139747 41 ATATGCAGAGCACCTCATTGCTGGCGGACTCATGACGCAGG ATATGCAGAGCACCTCATTGCTGGAGGACTCATGACGCAGG < 41bp 0.559923504832246 0.886374194346535 0.18146569 0.60760355 prediction 0.652901379028578 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12139727 chr10:12139731 synonymous SNV . 0 25 hm5C_associated_SNPs_100342 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:12139720-12139740
64251 chr2 131976402 131976402 1 + C A UCEC 131976398 + 131976378 131976418 41 GTCCGTGGAGAAGATCTGGACAAGCTCCACAGAGCTGCCTG GTCCGTGGAGAAGATCTGGACAAGATCCACAGAGCTGCCTG < 41bp 0.485172815541858 0.826366200916817 0.11829418 0.18143505 prediction 0.652732401833634 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976398 chr2:131976402 nonsynonymous SNV 0.724 1 25 hm5C_associated_SNPs_100345 0 0 1 FASTKD2 POSTAR2 ENCODE chr2:131976356-131976497
64251 chr3 71804047 71804047 1 + T G GBM 71804044 + 71804024 71804064 41 AATTCAAGACGGAGAAGAGGCTGTGCAAGATGTTCTACGCC AATTCAAGACGGAGAAGAGGCTGGGCAAGATGTTCTACGCC < 41bp 0.500245134067823 0.826576874922871 0.2067211 0.72166497 prediction 0.652663481710096 Functional Gain - GPR27 ENSG00000170837 CDS Human protein_coding chr3:71804044 chr3:71804047 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_100347 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:71804039-71804067
64251 chr17 4047090 4047090 1 + C A COAD 4047086 + 4047066 4047106 41 GCCGTGGGCTTTTGTTGGGCCTGGCTGTAGCCGCAGCAGCG GCCGTGGGCTTTTGTTGGGCCTGGATGTAGCCGCAGCAGCG < 41bp 0.530238451277398 0.856430265182849 0.14069721 0.21560922 prediction 0.652383627810903 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4047086 chr17:4047090 nonsynonymous SNV 0.230 1 25 hm5C_associated_SNPs_100352 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:4047053-4047108
64251 chrX 129546420 129546420 1 + C A CESC 129546416 + 129546396 129546436 41 AGAGCAACCATCCTCTTCGTCACCCAGACGCAAGACAGTAA AGAGCAACCATCCTCTTCGTCACCAAGACGCAAGACAGTAA < 41bp 0.433536946325032 0.826150006548414 0.09190568 0.06186813 prediction 0.652300013096828 Functional Gain - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546416 chrX:129546420 synonymous SNV . 0 25 hm5C_associated_SNPs_100355 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chrX:129546400-129546420
64251 chr8 22864389 22864389 1 + C A UCEC 22864385 + 22864365 22864405 41 GCCATCCGAGCTGCACTCATCTCCCGCCGCCACCTGCAGTT GCCATCCGAGCTGCACTCATCTCCAGCCGCCACCTGCAGTT < 41bp 0.414861516457317 0.826147395043311 0.20024765 0.9401634 prediction 0.652294790086622 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22864385 chr8:22864389 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_100356 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:22864359-22864402
64251 chr8 27507273 27507273 1 + C A GBM 27507269 + 27507249 27507289 41 TGTGCGTTACAGAAGAGGACCTGGCGGGTGACGACGAGGAC TGTGCGTTACAGAAGAGGACCTGGAGGGTGACGACGAGGAC < 41bp 0.557315126360787 0.883395473811802 0.23803255 0.30033553 prediction 0.65216069490203 Functional Gain - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27507269 chr8:27507273 nonsynonymous SNV 0.332 0 25 hm5C_associated_SNPs_100358 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:27507252-27507277
64251 chr12 122481895 122481895 1 + C A rs144915314 122481891 + 122481871 122481911 41 AGAGCCCAACTCGGCTGTGCCCAGCGACGGCACCGAGGCCA AGAGCCCAACTCGGCTGTGCCCAGAGACGGCACCGAGGCCA < 41bp 0.442486135554129 0.826079109595959 0.097358644 0.44559613 prediction 0.652158219191918 Functional Gain - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122481891 chr12:122481895 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_100359 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr12:122481870-122481897
64251 chr19 9271224 9271224 1 + T G rs45608539 9271221 + 9271201 9271241 41 AAAATCCACATGCGAGTTCACACTGGCGAGAGGCCTTACAA AAAATCCACATGCGAGTTCACACGGGCGAGAGGCCTTACAA < 41bp 0.543102892594694 0.86911436522094 0.27172744 0.85280645 prediction 0.652022945252493 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271221 chr19:9271224 synonymous SNV . 0 24 hm5C_associated_SNPs_100360 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:9271216-9271242
64251 chr20 37632428 37632428 1 + C A GBM 37632424 + 37632404 37632444 41 ACTGTTGTGTCGATGCTCATCGAGCAGGCTCGAGCACTAGC ACTGTTGTGTCGATGCTCATCGAGAAGGCTCGAGCACTAGC < 41bp 0.560351291540179 0.886356380197262 0.3746939 0.511983 prediction 0.652010177314166 Functional Gain - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632424 chr20:37632428 nonsynonymous SNV 0.896 1 25 hm5C_associated_SNPs_100361 0 0 1 EFTUD2 POSTAR2 ENCODE chr20:37632381-37632471
64251 chr2 10188284 10188284 1 + C A STAD 10188280 + 10188260 10188300 41 AATGACCTGCCCAGGAAAACCACCCCTCTGATTTCTGTCTC AATGACCTGCCCAGGAAAACCACCACTCTGATTTCTGTCTC < 41bp 0.417226545034881 0.82593828139851 0.050869346 0.31693637 prediction 0.65187656279702 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10188280 chr2:10188284 nonsynonymous SNV 0.933 0 25 hm5C_associated_SNPs_100365 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:10188257-10188316
64251 chr5 54603895 54603895 1 + C A rs532577582 54603891 + 54603871 54603911 41 CAGCGTGTTCGAGGGCGACTCGACCACTGCGGCGGGAACCA CAGCGTGTTCGAGGGCGACTCGACAACTGCGGCGGGAACCA < 41bp 0.457256774968723 0.825921071553204 0.31126127 0.5971291 prediction 0.651842143106408 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54603891 chr5:54603895 synonymous SNV . 0 25 hm5C_associated_SNPs_100367 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:54603820-54603900
64251 chr2 32503260 32503260 1 + C A rs564046880 32503256 + 32503236 32503276 41 GGGCCCGCCCCCGGCCTATGCCCCCACTAACGGGGACTTCA GGGCCCGCCCCCGGCCTATGCCCCAACTAACGGGGACTTCA < 41bp 0.465499468635571 0.825774733409526 0.03928387 0.049545974 prediction 0.651549466819052 Functional Gain - YIPF4 ENSG00000119820 CDS Human protein_coding chr2:32503256 chr2:32503260 synonymous SNV . 0 25 hm5C_associated_SNPs_100373 0 0 4 DDX3X POSTAR2 ENCODE chr2:32503211-32503263
64251 chr17 66124336 66124336 1 + T G rs142658873 66124333 + 66124313 66124353 41 GTCTGAGGCTGCCTCCGGCTCAGTAGTCAGCTCAATGCTCA GTCTGAGGCTGCCTCCGGCTCAGGAGTCAGCTCAATGCTCA < 41bp 0.485115114708271 0.825689843160045 0.22393402 0.89756703 prediction 0.651379686320089 Functional Gain - LINC00674 ENSG00000267023 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:66124333 chr17:66124336 . . 0 24 hm5C_associated_SNPs_100377 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:66124335-66124355
64251 chr19 38865417 38865417 1 + C A rs200109220 38865413 + 38865393 38865433 41 GCCGTAAATCAGGCGGTCTGCTTGCCGCATCACGCAAGATG GCCGTAAATCAGGCGGTCTGCTTGACGCATCACGCAAGATG < 41bp 0.534354856130364 0.859941734830958 0.114412606 0.19319057 prediction 0.651173757401187 Functional Gain - PSMD8 ENSG00000099341 CDS Human protein_coding chr19:38865413 chr19:38865417 nonsynonymous SNV 0.929 3 25 hm5C_associated_SNPs_100379 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:38865380-38865540
64251 chr8 9413606 9413606 1 + C A STAD 9413602 + 9413582 9413622 41 CCAGCCTCTCCCACGGCCAGCGGCCTGGCCCCCTTCGCCTC CCAGCCTCTCCCACGGCCAGCGGCATGGCCCCCTTCGCCTC < 41bp 0.516517674011659 0.84206200277005 0.6555251 0.7156767 prediction 0.651088657516783 Functional Gain - TNKS ENSG00000173273 CDS Human protein_coding chr8:9413602 chr8:9413606 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_100382 0 0 1 ZNF622 POSTAR2 ENCODE chr8:9413476-9413613
64251 chr17 40761777 40761777 1 + C A UCEC 40761773 + 40761753 40761793 41 GCGATGCCGAGGGAAATCATCACCCTACAGTTGGGCCAGTG GCGATGCCGAGGGAAATCATCACCATACAGTTGGGCCAGTG < 41bp 0.450861610707229 0.825454734158504 0.36674 0.24405101 prediction 0.650909468317008 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40761773 chr17:40761777 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_100385 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:40761753-40761800
64251 chr16 1838702 1838702 1 + C A LGG 1838698 + 1838678 1838718 41 AGAAGATTCTGGACGCGACGCCCGCGTGCCTCCCCTGACTA AGAAGATTCTGGACGCGACGCCCGAGTGCCTCCCCTGACTA < 41bp 0.533413049542093 0.858813469294364 0.12865847 0.30485165 prediction 0.650800839504543 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1838698 chr16:1838702 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_100387 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1838682-1838717
64251 chr16 46963938 46963938 1 + C A rs145418203 46963934 + 46963914 46963954 41 AGCTGAATCTGGTCGGTTTCCTAGCTTTTAGGTGGTAAAAG AGCTGAATCTGGTCGGTTTCCTAGATTTTAGGTGGTAAAAG < 41bp 0.467968889145861 0.825390056813454 0.68653506 0.6907639 prediction 0.650780113626909 Functional Gain - GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46963934 chr16:46963938 . . 0 25 hm5C_associated_SNPs_100388 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:46963920-46963945
64251 chr12 104995722 104995722 1 + C A LUSC 104995718 + 104995698 104995738 41 CCCTTTGGTGTGGACATCTGCTGCCGGAAGGGGTCCCGAAG CCCTTTGGTGTGGACATCTGCTGCAGGAAGGGGTCCCGAAG < 41bp 0.433666547417143 0.82528232937639 0.28320265 0.37525755 prediction 0.650564658752781 Functional Gain - CHST11 ENSG00000171310 CDS Human protein_coding chr12:104995718 chr12:104995722 synonymous SNV . 0 25 hm5C_associated_SNPs_100394 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:104995712-104995731
64251 chrX 65420462 65420462 1 + C A LUSC 65420458 + 65420438 65420478 41 ACAGTGGCCTGGCACCTGCTCGGCCTGGGCACAGAGACTGA ACAGTGGCCTGGCACCTGCTCGGCATGGGCACAGAGACTGA < 41bp 0.433508161252823 0.82527226770934 0.64808315 0.68841594 prediction 0.65054453541868 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65420458 chrX:65420462 nonsynonymous SNV 0.964 2 25 hm5C_associated_SNPs_100395 0 0 1 SND1 POSTAR2 ENCODE chrX:65420391-65420488
64251 chr22 29442723 29442723 1 + C A HNSC 29442719 + 29442699 29442739 41 TGCAGAATTCCATGAACAGGCTGGCTGTGCAGGCTCTAGAG TGCAGAATTCCATGAACAGGCTGGATGTGCAGGCTCTAGAG < 41bp 0.437187849246306 0.825262065721317 0.15879026 0.20110977 prediction 0.650524131442634 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29442719 chr22:29442723 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_100397 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:29442711-29442740
64251 chr7 1132295 1132295 1 + C A UCEC 1132291 + 1132271 1132311 41 CCCCTCACGGGCCACATTGTCAACCTCGCCGCCTTCTCCAA CCCCTCACGGGCCACATTGTCAACATCGCCGCCTTCTCCAA < 41bp 0.433644923743032 0.824991491555947 0.36029547 0.24599344 prediction 0.649982983111894 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1132291 chr7:1132295 nonsynonymous SNV 0.248 2 25 hm5C_associated_SNPs_100410 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:1132289-1132313
64251 chr9 131584613 131584613 1 - G T SARC 131584617 - 131584597 131584637 41 CTTTACGTAGGATTTCCCATCAGCCTCTGTCCTGTGGGCAG CTTTACGTAGGATTTCCCATCAGCATCTGTCCTGTGGGCAG < 41bp 0.447688522147259 0.824926559115493 0.28474784 0.4124529 prediction 0.649853118230987 Functional Gain - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131584617 chr9:131584613 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_100414 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131584587-131584625
64251 chr9 119461612 119461612 1 + C A UCEC 119461608 + 119461588 119461628 41 GCTGAGGGCACCGTCTACTTCACCCAGGGCTTAGGCCTCAA GCTGAGGGCACCGTCTACTTCACCAAGGGCTTAGGCCTCAA < 41bp 0.564584379877523 0.889466640155584 0.07726449 0.5942224 prediction 0.649764520556122 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461608 chr9:119461612 nonsynonymous SNV 0.976 3 25 hm5C_associated_SNPs_100415 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:119461606-119461637
64251 chr17 29159410 29159410 1 + C A THCA 29159406 + 29159386 29159426 41 GGCGGCTGCAGCTGCTCCGCCTCCCGTGAAGGACTGCGAGA GGCGGCTGCAGCTGCTCCGCCTCCAGTGAAGGACTGCGAGA < 41bp 0.44559099175994 0.824777500934861 0.22357684 0.9359391 prediction 0.649555001869722 Functional Gain - ATAD5 ENSG00000176208 CDS Human protein_coding chr17:29159406 chr17:29159410 synonymous SNV . 0 25 hm5C_associated_SNPs_100420 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:29159402-29159430
64251 chr3 112992155 112992155 1 + C A LUAD 112992151 + 112992131 112992171 41 GCCGAGAACGAGGTTGGGAGCGCCCATGCCGTAGTCCAGCT GCCGAGAACGAGGTTGGGAGCGCCAATGCCGTAGTCCAGCT < 41bp 0.56074395573356 0.885444372094443 0.369435 0.43764555 prediction 0.649400832721766 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112992151 chr3:112992155 nonsynonymous SNV 0.053 2 25 hm5C_associated_SNPs_100424 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr3:112992152-112992172
64251 chr15 65153700 65153700 1 + C A UCEC 65153696 + 65153676 65153716 41 GTAAAGGTGGACAAGAGCTGCGCCCTGGAGCATGTGACACG GTAAAGGTGGACAAGAGCTGCGCCATGGAGCATGTGACACG < 41bp 0.422354926185789 0.82447800351698 0.046762675 0.27669907 prediction 0.648956007033959 Functional Gain - PLEKHO2 ENSG00000241839;ENSG00000249240 CDS Human other chr15:65153696 chr15:65153700 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_100434 0 0 1 EIF3H POSTAR2 ENCODE chr15:65153675-65153753
64251 chr2 25042469 25042469 1 + C A rs78061613 25042465 + 25042445 25042485 41 CCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTG CCTCCACAGTCCCGGAAAGCCCAGAGGCAAAGGCAGCTTTG < 41bp 0.480944761261893 0.824476650484916 0.6703849 0.7986218 prediction 0.648953300969833 Functional Gain - ADCY3;CENPO ENSG00000138031;ENSG00000138092 UTR3 Human other chr2:25042465 chr2:25042469 . . 0 25 hm5C_associated_SNPs_100435 0 0 1 UPF1 POSTAR2 ENCODE chr2:25042418-25042497
64251 chr16 2259370 2259370 1 - G T SKCM 2259374 - 2259354 2259394 41 TGTCGGTCTGCTTTTATTACCTCCCAGACTGAGCCCCCGAC TGTCGGTCTGCTTTTATTACCTCCAAGACTGAGCCCCCGAC < 41bp 0.430684765434599 0.824469422232243 0.14667252 0.96353674 prediction 0.648938844464487 Functional Gain - BRICD5 ENSG00000182685 CDS Human protein_coding chr16:2259374 chr16:2259370 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_100436 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917678 chr16:2259360-2259380
64251 chr15 89859994 89859994 1 + C A rs3087374 89859990 + 89859970 89860010 41 CTCCAGGCAGTGCTATGGTCCAGGCTGGCTTCGTTTTTCCA CTCCAGGCAGTGCTATGGTCCAGGATGGCTTCGTTTTTCCA < 41bp 0.512718538180009 0.837167668802986 0.45104054 0.6658772 prediction 0.648898261245953 Functional Gain - POLG ENSG00000140521 CDS Human protein_coding chr15:89859990 chr15:89859994 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_100439 4 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:89859977-89860015
64251 chr14 24634093 24634093 1 + C A UCEC 24634089 + 24634069 24634109 41 CCTGGAATGCACCCCAGGCTCCACCTGGGCCAGGCCCGCAT CCTGGAATGCACCCCAGGCTCCACATGGGCCAGGCCCGCAT < 41bp 0.439505569692691 0.824394741911585 0.071341366 0.12081757 prediction 0.64878948382317 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24634089 chr14:24634093 nonsynonymous SNV 0.759 3 25 hm5C_associated_SNPs_100440 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:24634072-24634108
64251 chr14 29237217 29237217 1 + C A LIHC 29237213 + 29237193 29237233 41 CAAGTGCTTCGTGAAGGTGCCGCGCCACTACGACGACCCGG CAAGTGCTTCGTGAAGGTGCCGCGACACTACGACGACCCGG < 41bp 0.545015762918913 0.869365527936006 0.28982824 0.4281901 prediction 0.648699530034186 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237213 chr14:29237217 synonymous SNV . 0 25 hm5C_associated_SNPs_100443 0 0 1 YBX3 POSTAR2 ENCODE chr14:29237115-29237227
64251 chr3 197894609 197894609 1 + T G COAD 197894606 + 197894586 197894626 41 GAAACTGTGAGCAAGAGCGTCTGTGCTGAACCATGGCGCCA GAAACTGTGAGCAAGAGCGTCTGGGCTGAACCATGGCGCCA < 41bp 0.469516967367107 0.824301052143408 0.3436152 0.8817878 prediction 0.648602104286816 Functional Gain - FAM157A;FAM157B ENSG00000236438 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr3:197894606 chr3:197894609 . . 0 24 hm5C_associated_SNPs_100445 0 0 1 BUD13 POSTAR2 ENCODE chr3:197894601-197894712
64251 chr22 21804312 21804312 1 + C A rs192469690 21804308 + 21804288 21804328 41 GGGGCCCCCTAACCCCACCCCAGGCAGCGGAAGGGGCTGAC GGGGCCCCCTAACCCCACCCCAGGAAGCGGAAGGGGCTGAC < 41bp 0.510891493756672 0.835160919448744 0.36247933 0.5724807 prediction 0.648538851384145 Functional Gain - HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21804308 chr22:21804312 . . 0 25 hm5C_associated_SNPs_100447 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr22:21804297-21804340
64251 chr1 12169678 12169678 1 + C A OV 12169674 + 12169654 12169694 41 GGCTTCCCCAGGGGTCAGCCCTGCCTGTGCCAGCCCAGAGA GGCTTCCCCAGGGGTCAGCCCTGCATGTGCCAGCCCAGAGA < 41bp 0.419842808595228 0.824157777851709 0.24298775 0.7863609 prediction 0.648315555703418 Functional Gain - TNFRSF8 ENSG00000120949 CDS Human protein_coding chr1:12169674 chr1:12169678 synonymous SNV . 0 25 hm5C_associated_SNPs_100455 0 0 1 DDX24 POSTAR2 ENCODE chr1:12169664-12169714
64251 chr5 175799590 175799590 1 + C A rs534680857 175799586 + 175799566 175799606 41 TCCCTGAGCCCAGGCCTGGCCTGCCAGCCTCTCTTGACTAC TCCCTGAGCCCAGGCCTGGCCTGCAAGCCTCTCTTGACTAC < 41bp 0.464961174376108 0.824120107950314 0.01865694 0.029856443 prediction 0.648240215900628 Functional Gain - ARL10 ENSG00000175414 UTR3 Human protein_coding chr5:175799586 chr5:175799590 . . 0 25 hm5C_associated_SNPs_100458 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr5:175799561-175799598
64251 chr1 76262742 76262742 1 + C A LUSC 76262738 + 76262718 76262758 41 TTCCCCGTCGTCGGGAGAAACCCGCTCACCTCAGGGTCCCC TTCCCCGTCGTCGGGAGAAACCCGATCACCTCAGGGTCCCC < 41bp 0.536640435049476 0.860736026518855 0.46748546 0.7814732 prediction 0.648191182938758 Functional Gain - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76262738 chr1:76262742 synonymous SNV . 0 25 hm5C_associated_SNPs_100460 0 0 1 XPO5 POSTAR2 ENCODE chr1:76262666-76262742
64251 chr10 95259963 95259963 1 + C A GBM 95259959 + 95259939 95259979 41 TCACAAGTGGGAAAGGAAAGCTGACTGATAAAGAGAGACAC TCACAAGTGGGAAAGGAAAGCTGAATGATAAAGAGAGACAC < 41bp 0.438758040205917 0.824015937038901 0.2099728 0.16457304 prediction 0.648031874077801 Functional Gain - CEP55 ENSG00000138180 CDS Human protein_coding chr10:95259959 chr10:95259963 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_100464 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr10:95259935-95259965
64251 chr5 64859128 64859128 1 + T G rs116792697 64859125 + 64859105 64859145 41 TTGTGTCGCGCCTTTTCTGACGATGCGAACAACATGGCGGC TTGTGTCGCGCCTTTTCTGACGAGGCGAACAACATGGCGGC < 41bp 0.489420949131107 0.823955426376776 0.2751608 0.9225292 prediction 0.647910852753551 Functional Gain - PPWD1 ENSG00000113593 UTR5 Human protein_coding chr5:64859125 chr5:64859128 . . 0 24 hm5C_associated_SNPs_100466 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:64859120-64859140
64251 chr22 17083002 17083002 1 + C A rs541954424 17082998 + 17082978 17083018 41 CGTGGAGCAGCCGCAGCCACCACCCCCCGAGGAGCCTGGAG CGTGGAGCAGCCGCAGCCACCACCACCCGAGGAGCCTGGAG < 41bp 0.525622482986503 0.849517738650687 0.30445924 0.36675608 prediction 0.647790511328368 Functional Gain - TPTEP1 ENSG00000100181 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:17082998 chr22:17083002 . . 0 25 hm5C_associated_SNPs_100469 0 0 1 SERBP1 POSTAR2 ENCODE chr22:17082959-17083009
64251 chr16 30941812 30941812 1 + C A COAD 30941808 + 30941788 30941828 41 CCTTGGCTGCTGGATCCGACCACCCCCTGCCCCGGGCCGCC CCTTGGCTGCTGGATCCGACCACCACCTGCCCCGGGCCGCC < 41bp 0.43283687664855 0.823892046366287 0.09910762 0.087173045 prediction 0.647784092732573 Functional Gain - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30941808 chr16:30941812 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_100470 0 0 1 RBM15 POSTAR2 ENCODE chr16:30941795-30941840
64251 chr5 54603898 54603898 1 + T G rs16884049 54603895 + 54603875 54603915 41 GTGTTCGAGGGCGACTCGACCACTGCGGCGGGAACCAAAAA GTGTTCGAGGGCGACTCGACCACGGCGGCGGGAACCAAAAA < 41bp 0.525824764679084 0.849595937717603 0.052661538 0.44027814 prediction 0.647542346077037 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54603895 chr5:54603898 synonymous SNV . 0 24 hm5C_associated_SNPs_100476 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:54603820-54603900
64251 chr4 48027167 48027167 1 + T G rs35150964 48027165 + 48027145 48027185 41 TGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTG TGTCACAGCTGCTGGCTTCTCCGGTGCTCTACACGGACCTG < 41bp 0.505639016002248 0.829327183556668 0.22798455 0.89603657 prediction 0.64737633510884 Functional Gain - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48027165 chr4:48027167 synonymous SNV . 0 23 hm5C_associated_SNPs_100478 0 0 2 DDX3X POSTAR2 ENCODE chr4:48027136-48027192
64251 chr14 50088031 50088031 1 + C A PAAD 50088027 + 50088007 50088047 41 ACGGAAGGTGCTAATCCTGACGCTCGTGGTGGCCGCCTGCG ACGGAAGGTGCTAATCCTGACGCTAGTGGTGGCCGCCTGCG < 41bp 0.463197850980001 0.823664733341782 0.04242012 0.18278113 prediction 0.647329466683563 Functional Gain - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088027 chr14:50088031 synonymous SNV . 0 25 hm5C_associated_SNPs_100480 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:50088025-50088061
64251 chr7 100211131 100211131 1 + C A UCEC 100211127 + 100211107 100211147 41 CGCCATGTGGCACCCATTCCCAGCCACTATGATGTCCAGGA CGCCATGTGGCACCCATTCCCAGCAACTATGATGTCCAGGA < 41bp 0.432477217030469 0.823578570513475 0.35142493 0.58930355 prediction 0.647157141026951 Functional Gain - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100211127 chr7:100211131 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_100483 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:100211101-100211139
64251 chr11 65631078 65631078 1 + C A COAD 65631074 + 65631054 65631094 41 CCTCCTTGCCACTCCAGGGGCGGGCACAGGCCGGAGCTGCT CCTCCTTGCCACTCCAGGGGCGGGAACAGGCCGGAGCTGCT < 41bp 0.451921944794797 0.823361185919524 0.9096576 0.9124927 prediction 0.646722371839048 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631074 chr11:65631078 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_100495 0 0 18 AGGF1 POSTAR2 ENCODE chr11:65631054-65631119
64251 chr2 132021422 132021422 1 + C A rs200048058 132021418 + 132021398 132021438 41 CTACAACGAGCTGCGTGTGGCTCCCGAGGAGCACCCCATCC CTACAACGAGCTGCGTGTGGCTCCAGAGGAGCACCCCATCC < 41bp 0.435082357886915 0.82334439453743 0.23403814 0.9335891 prediction 0.646688789074861 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021418 chr2:132021422 synonymous SNV . 0 25 hm5C_associated_SNPs_100496 0 0 4 RBM15 POSTAR2 ENCODE chr2:132021390-132021456
64251 chr11 66293630 66293630 1 + C A rs143495423 66293626 + 66293606 66293646 41 AGCCTTTGCTTTGGCCGGTACGGGCGGGAGGACAACACCCT AGCCTTTGCTTTGGCCGGTACGGGAGGGAGGACAACACCCT < 41bp 0.559321984587439 0.882563514486173 0.47822788 0.76836264 prediction 0.64648305979747 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66293626 chr11:66293630 synonymous SNV . 0 25 hm5C_associated_SNPs_100500 0 0 2 BUD13 POSTAR2 ENCODE chr11:66293621-66293674
64251 chr11 69466021 69466021 1 + C A CESC 69466017 + 69465997 69466037 41 GAGGAGGTGGACCTGGCTTGCACACCCACCGACGTGCGGGA GAGGAGGTGGACCTGGCTTGCACAACCACCGACGTGCGGGA < 41bp 0.546486596501132 0.869672142452887 0.2811927 0.24029225 prediction 0.646371091903509 Functional Gain - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69466017 chr11:69466021 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_100504 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:69465954-69466024
64251 chr19 30934718 30934718 1 + C A LUAD 30934714 + 30934694 30934734 41 GCCCATGGGCAGTCAGATGGCGCTCCTGGCCAACCAGCTGG GCCCATGGGCAGTCAGATGGCGCTACTGGCCAACCAGCTGG < 41bp 0.553051850525387 0.876218449027292 0.29563507 0.32846817 prediction 0.646333197003809 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30934714 chr19:30934718 synonymous SNV . 0 25 hm5C_associated_SNPs_100506 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:30934707-30934727
64251 chr17 27067871 27067871 1 + C A COAD 27067867 + 27067847 27067887 41 AAGCTGGGCCTGGACCACCTCTCCCTGGGGGAGGAGCCTGT AAGCTGGGCCTGGACCACCTCTCCATGGGGGAGGAGCCTGT < 41bp 0.406325674109893 0.822949747073127 0.9073553 0.972721 prediction 0.645899494146255 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27067867 chr17:27067871 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_100515 0 0 1 PPIG POSTAR2 ENCODE chr17:27067850-27067907
64251 chr12 56530574 56530574 1 + C A LGG 56530570 + 56530550 56530590 41 TGACTTTAGGAGCACTGACGCTGCCTCTGGCCCGCCTGCTG TGACTTTAGGAGCACTGACGCTGCATCTGGCCCGCCTGCTG < 41bp 0.427965904764526 0.822911267413686 0.29861996 0.36008853 prediction 0.645822534827372 Functional Gain - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56530570 chr12:56530574 nonsynonymous SNV 0.930 3 25 hm5C_associated_SNPs_100517 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:56530569-56530596
64251 chr19 35761435 35761435 1 + C A LUSC 35761431 + 35761411 35761451 41 AGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGAT AGGCACGATTTGCCTATTTCCCAGAGTCCAGTGTGGGAGAT < 41bp 0.453375066573106 0.822879452598133 0.88870317 0.90685123 prediction 0.645758905196266 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35761431 chr19:35761435 nonsynonymous SNV 0.991 5 25 hm5C_associated_SNPs_100520 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:35761417-35761447
64251 chr2 132021821 132021821 1 + C A LUAD 132021817 + 132021797 132021837 41 CGAGCAGGAGATGGCCACGGCGGCCTCCAGCTCCTCCCTAG CGAGCAGGAGATGGCCACGGCGGCATCCAGCTCCTCCCTAG < 41bp 0.455773366927982 0.822830367796223 0.4908368 0.535561 prediction 0.645660735592447 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021817 chr2:132021821 synonymous SNV . 0 25 hm5C_associated_SNPs_100526 0 0 7 EIF3H POSTAR2 ENCODE chr2:132021758-132021837
64251 chr12 56620196 56620196 1 + C A UCEC 56620192 + 56620172 56620212 41 GCCTACCACTGGACCCTCTGCTGCCTCTCCAGGTAAATCTG GCCTACCACTGGACCCTCTGCTGCATCTCCAGGTAAATCTG < 41bp 0.418172400007116 0.82281191985165 0.16535985 0.1351912 prediction 0.645623839703299 Functional Gain - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56620192 chr12:56620196 synonymous SNV . 0 25 hm5C_associated_SNPs_100529 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56620189-56620221
64251 chr16 2258560 2258560 1 + C A THCA 2258556 + 2258536 2258576 41 AGCGGCAACCCCGGGGAGTCCTCCCGCGGCTGGATGTGGGG AGCGGCAACCCCGGGGAGTCCTCCAGCGGCTGGATGTGGGG < 41bp 0.56660433527302 0.889356108754948 0.26220644 0.9651244 prediction 0.645503546963856 Functional Gain - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258556 chr16:2258560 nonsynonymous SNV 0.166 1 25 hm5C_associated_SNPs_100531 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr16:2258532-2258567
64251 chr17 6915966 6915966 1 + C A UCEC 6915962 + 6915942 6915982 41 GGCTTTCTCCCACCGCTTTCCGAGCCCGCTTGCACCTCGGC GGCTTTCTCCCACCGCTTTCCGAGACCGCTTGCACCTCGGC < 41bp 0.515503187265276 0.838116029969643 0.7798958 0.8705819 prediction 0.645225685408734 Functional Gain - RNASEK ENSG00000219200;ENSG00000269871 CDS Human other chr17:6915962 chr17:6915966 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_100534 0 0 15 EIF3D POSTAR2 GSE65004,GSM1585670 chr17:6915943-6915969
64251 chr1 114226153 114226153 1 + C A rs61742852 114226149 + 114226129 114226169 41 TCGAAGAATAGCAGGCTATACGGGCAGTAATGCTGAGCAGA TCGAAGAATAGCAGGCTATACGGGAAGTAATGCTGAGCAGA < 41bp 0.519900983516983 0.842509842377839 0.29846817 0.52120316 prediction 0.645217717721712 Functional Gain - MAGI3 ENSG00000081026 CDS Human protein_coding chr1:114226149 chr1:114226153 synonymous SNV . 0 25 hm5C_associated_SNPs_100535 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:114226152-114226153
64251 chr16 28995757 28995757 1 + C A rs7140 28995753 + 28995733 28995773 41 CGTGTGCCAGCTCCCAGACACTACCTGGGTAGCTCAGGGGA CGTGTGCCAGCTCCCAGACACTACATGGGTAGCTCAGGGGA < 41bp 0.452012305787209 0.822397231663766 0.032994837 0.89954984 prediction 0.644794463327532 Functional Gain - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28995753 chr16:28995757 nonsynonymous SNV 0.955 1 25 hm5C_associated_SNPs_100550 0 1 3 DDX55 POSTAR2 ENCODE chr16:28995708-28995789
64251 chr22 21141271 21141271 1 + C A rs552213670 21141267 + 21141247 21141287 41 ACCCAAGTCCGCTTCACTGTCGACCGCCCCTTTCTTTTCCT ACCCAAGTCCGCTTCACTGTCGACAGCCCCTTTCTTTTCCT < 41bp 0.553978140786012 0.876215924978175 0.13425428 0.09451571 prediction 0.644475568384325 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21141267 chr22:21141271 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_100557 0 0 2 SND1 POSTAR2 ENCODE chr22:21141253-21141282
64251 chr2 176972177 176972177 1 + C A LUSC 176972173 + 176972153 176972193 41 GCCCCGTCTGACTTCGCTAGCAAGCCTTCGTTCCTTTCCCA GCCCCGTCTGACTTCGCTAGCAAGACTTCGTTCCTTTCCCA < 41bp 0.483852552382398 0.822181565588604 0.84656036 0.9251727 prediction 0.644363131177208 Functional Gain - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176972173 chr2:176972177 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_100559 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176972124-176972204
64251 chr16 72142224 72142224 1 + T G COAD 72142221 + 72142201 72142241 41 GTTTACCTGCAGTGGAAGAACAATAATTACTCCACCATCTG GTTTACCTGCAGTGGAAGAACAAGAATTACTCCACCATCTG < 41bp 0.459677727295596 0.822162415003445 0.24872923 0.8934271 prediction 0.644324830006891 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142221 chr16:72142224 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_100560 0 0 5 EWSR1 POSTAR2 SRX029344 chr16:72142218-72142241
64251 chr1 156594455 156594455 1 + C A LIHC 156594451 + 156594431 156594471 41 CTGCTCGAGGGCTCCGTGCGCTACCCTGTGCTCACCGCACG CTGCTCGAGGGCTCCGTGCGCTACACTGTGCTCACCGCACG < 41bp 0.558455211198616 0.880528905118525 0.08169529 0.101450205 prediction 0.644147387839819 Functional Gain - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594451 chr1:156594455 nonsynonymous SNV 0.919 4 25 hm5C_associated_SNPs_100565 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr19 39899199 39899199 1 + C A HNSC 39899195 + 39899175 39899215 41 TCTGTACAGTCCCTGGGATCCGACCCTGATGAATATGCCAG TCTGTACAGTCCCTGGGATCCGACACTGATGAATATGCCAG < 41bp 0.447509203357418 0.821999457211828 0.19923854 0.32346576 prediction 0.643998914423656 Functional Gain - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39899195 chr19:39899199 nonsynonymous SNV 0.095 0 25 hm5C_associated_SNPs_100568 0 0 5 DDX59 POSTAR2 ENCODE chr19:39899175-39899221
64251 chr4 1389433 1389433 1 + C A rs145208075 1389429 + 1389409 1389449 41 GGAGTGCCCGCCTGCTCACACGTGCCCATGTGGAGTGCCTG GGAGTGCCCGCCTGCTCACACGTGACCATGTGGAGTGCCTG < 41bp 0.498804300165602 0.82194937401884 0.32343188 0.14584044 prediction 0.643898748037679 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389429 chr4:1389433 stopgain 0.005 0 25 hm5C_associated_SNPs_100572 0 0 1 RPS5 POSTAR2 ENCODE chr4:1389391-1389448
64251 chr4 69978304 69978304 1 + C A HNSC 69978300 + 69978280 69978320 41 AGCTAAACACCTTCGGGTTGCAGCCCACGACCTCACCTGGT AGCTAAACACCTTCGGGTTGCAGCACACGACCTCACCTGGT < 41bp 0.452868651038887 0.821771600782147 0.13695583 0.41351837 prediction 0.643543201564294 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69978300 chr4:69978304 synonymous SNV . 0 25 hm5C_associated_SNPs_100587 0 0 2 SND1 POSTAR2 ENCODE chr4:69978262-69978312
64251 chr8 37996519 37996519 1 + C A CHOL 37996515 + 37996495 37996535 41 GCTGGGGCGCCGTGGTAGAGCACACCCTGGCTGACGTCTTG GCTGGGGCGCCGTGGTAGAGCACAACCTGGCTGACGTCTTG < 41bp 0.447621714958865 0.821757017212708 0.040037185 0.06993401 prediction 0.643514034425416 Functional Gain - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37996515 chr8:37996519 nonsynonymous SNV 0.452 4 25 hm5C_associated_SNPs_100589 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr8:37996490-37996537
64251 chr2 241564980 241564980 1 + C A rs13019955 241564976 + 241564956 241564996 41 CTCCACCCGGGAGGCCAAAGCTGCCTGCAGGTCAGTGCCGC CTCCACCCGGGAGGCCAAAGCTGCATGCAGGTCAGTGCCGC < 41bp 0.501807443418999 0.823384494580283 0.21747121 0.25291675 prediction 0.643154102322568 Functional Gain - GPR35 ENSG00000178623 UTR5 Human protein_coding chr2:241564976 chr2:241564980 . . 0 25 hm5C_associated_SNPs_100600 0 0 1 RBFOX2 POSTAR2 ENCODE chr2:241564961-241565030
64251 chr6 53660073 53660073 1 + C A UCEC 53660069 + 53660049 53660089 41 GCGGCGATGTTCCACTGCATCCCCCTGTGGCGGTGCAACCG GCGGCGATGTTCCACTGCATCCCCATGTGGCGGTGCAACCG < 41bp 0.442453660079868 0.821460452858559 0.05105403 0.19041836 prediction 0.642920905717119 Functional Gain - LRRC1 ENSG00000137269 CDS Human protein_coding chr6:53660069 chr6:53660073 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_100604 0 0 3 DDX3X POSTAR2 ENCODE chr6:53660026-53660097
64251 chr7 35945288 35945288 1 + C A rs112122763 35945284 + 35945264 35945304 41 GGATTGCAGGCGTGCACCACCACGCCTGGCTAATTTTTGTA GGATTGCAGGCGTGCACCACCACGACTGGCTAATTTTTGTA < 41bp 0.475364736238587 0.821434212082412 0.19473106 0.12185007 prediction 0.642868424164825 Functional Gain - SEPT7 ENSG00000122545 downstream Human protein_coding chr7:35945284 chr7:35945288 . . 0 25 hm5C_associated_SNPs_100606 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:35945288-35945334
64251 chr19 990234 990234 1 + C A HNSC 990230 + 990210 990250 41 CCACCCCGCTCAGCGTGCTGCAGGCCGACCCCTCCAGGATT CCACCCCGCTCAGCGTGCTGCAGGACGACCCCTCCAGGATT < 41bp 0.538755045289506 0.860123155252411 0.5310509 0.6512665 prediction 0.642736219925809 Functional Gain - WDR18 ENSG00000065268 CDS Human protein_coding chr19:990230 chr19:990234 nonsynonymous SNV 0.723 0 25 hm5C_associated_SNPs_100607 0 0 2 SF3B4 POSTAR2 ENCODE chr19:990168-990237
64251 chr19 44501815 44501815 1 + C A rs56101767 44501811 + 44501791 44501831 41 GGTCCCTGGAGACCCCCAGCCAAACGGGTCAGTGTCTCATC GGTCCCTGGAGACCCCCAGCCAAAAGGGTCAGTGTCTCATC < 41bp 0.473264908298118 0.821341976362602 0.24399126 0.37966132 prediction 0.642683952725203 Functional Gain - LOC101928063 ENSG00000266921 ncRNA_exonic Human antisense chr19:44501811 chr19:44501815 . . 0 25 hm5C_associated_SNPs_100609 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:44501813-44501843
64251 chr6 348223 348223 1 + C A rs370002831 348219 + 348199 348239 41 TGGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGAC TGGGAGATCCTGTGCCAACCCCAAAGTGGGCTTCCAGAGAC < 41bp 0.428947777676658 0.821171867393186 0.15807581 0.35774487 prediction 0.642343734786373 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348219 chr6:348223 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_100616 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:348206-348256
64251 chr7 99751659 99751659 1 + C A rs185978679 99751655 + 99751635 99751675 41 CTGTGATGAGGCAGGCACACCTGTCGGTCTTGGCTTGCTGC CTGTGATGAGGCAGGCACACCTGTAGGTCTTGGCTTGCTGC < 41bp 0.472448679224302 0.82081893257042 0.17995936 0.3728723 prediction 0.64163786514084 Functional Gain - LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751655 chr7:99751659 . . 0 25 hm5C_associated_SNPs_100637 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:99751635-99751681
64251 chr11 20385323 20385323 1 + C A rs182333117 20385319 + 20385299 20385339 41 GGCGCTGTCTCCGTCGCCTCCAACCCCCCCGGTCCGACCAG GGCGCTGTCTCCGTCGCCTCCAACACCCCCGGTCCGACCAG < 41bp 0.523560571140155 0.844349853161346 0.14280406 0.06480166 prediction 0.641578564042382 Functional Gain - HTATIP2 ENSG00000109854 UTR5 Human protein_coding chr11:20385319 chr11:20385323 . . 0 25 hm5C_associated_SNPs_100639 0 0 1 DDX3X POSTAR2 ENCODE chr11:20385321-20385392
64251 chr12 102545573 102545573 1 + C A rs565215258 102545569 + 102545549 102545589 41 CTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATG CTGAAGAAGCTGGCAGCTGTCATGAGGCAAGTGAGACAATG < 41bp 0.529130851456439 0.849915093540339 0.80151284 0.87136734 prediction 0.6415684841678 Functional Gain - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102545569 chr12:102545573 synonymous SNV . 0 25 hm5C_associated_SNPs_100640 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:102545530-102545585
64251 chr19 6751293 6751293 1 + T G rs1049232 6751290 + 6751270 6751310 41 GCCACGGGGAGCCCCAGGACCTATGCACTTTATTTCTGACC GCCACGGGGAGCCCCAGGACCTAGGCACTTTATTTCTGACC < 41bp 0.472423219673653 0.820770124628759 0.05189264 0.19183862 prediction 0.641540249257518 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6751290 chr19:6751293 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_100641 1 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr19:6751252-6751305
64251 chr2 10187893 10187893 1 + C A rs113903638 10187889 + 10187869 10187909 41 CACGGATGTTCTCCAGTCCTCTGCCGTAGTGGCCAGAGCTC CACGGATGTTCTCCAGTCCTCTGCAGTAGTGGCCAGAGCTC < 41bp 0.566499031708857 0.88709721176749 0.00996384 0.039346844 prediction 0.641196360117267 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10187889 chr2:10187893 synonymous SNV . 0 25 hm5C_associated_SNPs_100647 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:10187862-10187897
64251 chr7 7273969 7273969 1 + C A BLCA 7273965 + 7273945 7273985 41 CGGGAAATGGCCTCTAAATCCTGGCTGAATTTTTTAACCTT CGGGAAATGGCCTCTAAATCCTGGATGAATTTTTTAACCTT < 41bp 0.549174591410992 0.869771450408234 0.7664043 0.7026563 prediction 0.641193717994484 Functional Gain - C1GALT1 ENSG00000106392 CDS Human protein_coding chr7:7273965 chr7:7273969 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_100648 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:7273960-7273980
64251 chr9 139840170 139840170 1 + C A UCEC 139840166 + 139840146 139840186 41 GGCCACCGGGCCGAGGCCACCACACTGCATGTGGCTCCCCA GGCCACCGGGCCGAGGCCACCACAATGCATGTGGCTCCCCA < 41bp 0.564611244405476 0.88518732796969 0.1868034 0.3152497 prediction 0.641152167128429 Functional Gain - C8G ENSG00000176919 CDS Human protein_coding chr9:139840166 chr9:139840170 nonsynonymous SNV 0.052 0 25 hm5C_associated_SNPs_100653 0 0 1 BUD13 POSTAR2 ENCODE chr9:139840112-139840172
64251 chr1 33959067 33959067 1 + C A GBM 33959063 + 33959043 33959083 41 GCTGATGAGGGCTCGGGCTGCAGTCAGGGCCATGGGGACTG GCTGATGAGGGCTCGGGCTGCAGTAAGGGCCATGGGGACTG < 41bp 0.432536924667201 0.820504912410044 0.10052717 0.42654043 prediction 0.641009824820087 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33959063 chr1:33959067 synonymous SNV . 0 25 hm5C_associated_SNPs_100660 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:33959038-33959069
64251 chr7 100275229 100275229 1 + C A OV 100275225 + 100275205 100275245 41 GACAACATCTGCTCCATCTACAGCCTCAAGACCCGCGAGGG GACAACATCTGCTCCATCTACAGCATCAAGACCCGCGAGGG < 41bp 0.442830547744323 0.820499898040536 0.15632677 0.07014042 prediction 0.640999796081072 Functional Gain - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275225 chr7:100275229 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_100661 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:100275200-100275237
64251 chr1 12202724 12202724 1 + C A rs189861783 12202720 + 12202700 12202740 41 TCCAGCATCTAGTGGTGGACCGGCCGGTCACTGCAGGGGTC TCCAGCATCTAGTGGTGGACCGGCAGGTCACTGCAGGGGTC < 41bp 0.543995165001138 0.864471826124123 0.3370756 0.41398996 prediction 0.64095332224597 Functional Gain - TNFRSF8 ENSG00000120949 UTR3 Human protein_coding chr1:12202720 chr1:12202724 . . 0 25 hm5C_associated_SNPs_100662 0 0 1 UPF1 POSTAR2 ENCODE chr1:12202669-12202728
64251 chrX 70522155 70522155 1 + T G rs768682304 70522152 + 70522132 70522172 41 GTCCTGCTGCCGAAAGCGAACTGTAGATTTCTCTGAGTTCT GTCCTGCTGCCGAAAGCGAACTGGAGATTTCTCTGAGTTCT < 41bp 0.46814990776988 0.820464210754112 0.37519026 0.8889288 prediction 0.640928421508224 Functional Gain - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70522152 chrX:70522155 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_100663 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:70522115-70522170
64251 chr15 40751142 40751142 1 + C A KIRP 40751138 + 40751118 40751158 41 ACCGCAGCCGTGACCGTGATCGTGCTACTGGGGGCTGGTCC ACCGCAGCCGTGACCGTGATCGTGATACTGGGGGCTGGTCC < 41bp 0.555247830455906 0.875660217027219 0.73410773 0.9285654 prediction 0.640824773142626 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751138 chr15:40751142 nonsynonymous SNV 0.018 1 25 hm5C_associated_SNPs_100667 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:40751141-40751142
64251 chr3 53899276 53899276 1 + C A rs1043261 53899272 + 53899252 53899292 41 TGTGCAGAACTTCTCCATGTCAAGCAGCAGGTGTCAGCAGG TGTGCAGAACTTCTCCATGTCAAGAAGCAGGTGTCAGCAGG < 41bp 0.5485291017002 0.86894004852212 0.1436441 0.32295346 prediction 0.640821893643839 Functional Gain - IL17RB ENSG00000056736 CDS Human protein_coding chr3:53899272 chr3:53899276 nonsynonymous SNV 0.122 1 25 hm5C_associated_SNPs_100668 0 0 3 EIF3H POSTAR2 ENCODE chr3:53899247-53899291
64251 chr10 75529125 75529125 1 + C A PAAD 75529121 + 75529101 75529141 41 CTAGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGCGTC CTAGTGTGCCCTGCTTTACACCAGATGTGCAGGGCAGCGTC < 41bp 0.440437229153271 0.820382602905346 0.18503407 0.32086787 prediction 0.640765205810691 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75529121 chr10:75529125 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_100673 0 0 7 FMR1 POSTAR2 ENCODE chr10:75529116-75529172
64251 chr1 165621271 165621271 1 + C A SKCM 165621267 + 165621247 165621287 41 TAGCTGTTGGAGGTGTTTACCACCCGGTAAGTTTTCCAGGA TAGCTGTTGGAGGTGTTTACCACCAGGTAAGTTTTCCAGGA < 41bp 0.569031639569719 0.889379094901499 0.42029154 0.733217 prediction 0.640694910663561 Functional Gain - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165621267 chr1:165621271 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_100679 0 0 7 GEMIN5 POSTAR2 ENCODE chr1:165621248-165621273
64251 chr3 38045751 38045751 1 + C A COAD 38045747 + 38045727 38045767 41 TGCTGTCCGTGCTGGCCAGGCTCCCTGAGGAGGTCCCCAGC TGCTGTCCGTGCTGGCCAGGCTCCATGAGGAGGTCCCCAGC < 41bp 0.415684249823211 0.820259969549551 0.16606277 0.91548693 prediction 0.640519939099101 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38045747 chr3:38045751 nonsynonymous SNV 0.698 1 25 hm5C_associated_SNPs_100682 0 0 5 BUD13 POSTAR2 ENCODE chr3:38045705-38045778
64251 chr15 83499472 83499472 1 + C A rs139061517 83499468 + 83499448 83499488 41 CCCACGCGGTGTCAGTAATTCACCCGTCCTCTAGGAAAACT CCCACGCGGTGTCAGTAATTCACCAGTCCTCTAGGAAAACT < 41bp 0.419199675234524 0.820240913217731 0.08613998 0.16930512 prediction 0.640481826435463 Functional Gain - WHAMM ENSG00000156232 CDS Human protein_coding chr15:83499468 chr15:83499472 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_100683 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr15:83499462-83499482
64251 chr16 72139184 72139184 1 + C A rs2074626 72139180 + 72139160 72139200 41 GGAGGAACTGGAGAACGCGCCTGCCCTGGCTGTGCTGCCCA GGAGGAACTGGAGAACGCGCCTGCACTGGCTGTGCTGCCCA < 41bp 0.410110010855725 0.820226952186654 0.15373597 0.2668984 prediction 0.640453904373308 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72139180 chr16:72139184 synonymous SNV . 0 25 hm5C_associated_SNPs_100684 0 0 3 PPIG POSTAR2 ENCODE chr16:72139130-72139190
64251 chr11 63987784 63987784 1 + C A UCEC 63987780 + 63987760 63987800 41 CCTGAGGGCATGAGTGAGATCTACCTGCGGTGCCAGGATGT CCTGAGGGCATGAGTGAGATCTACATGCGGTGCCAGGATGT < 41bp 0.422344661021345 0.820212960222988 0.07233253 0.6893527 prediction 0.640425920445977 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987780 chr11:63987784 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_100685 0 0 4 FMR1 POSTAR2 ENCODE chr11:63987747-63987798
64251 chr11 57563067 57563067 1 + T G KIRC 57563064 + 57563044 57563084 41 TATAGGATCACAGTCACCTTCTATATAGCACCATCCCCAGG TATAGGATCACAGTCACCTTCTAGATAGCACCATCCCCAGG < 41bp 0.485590179234101 0.820196862197315 0.15383527 0.1766848 prediction 0.64039372439463 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57563064 chr11:57563067 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_100687 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:57563056-57563083
64251 chr7 154735807 154735807 1 - G T GBM 154735811 - 154735791 154735831 41 CTCCTGCGGTGCGGGGCTGGCTGTCTGGCTGGCGAGGAGCT CTCCTGCGGTGCGGGGCTGGCTGTATGGCTGGCGAGGAGCT < 41bp 0.549728102622155 0.869770609910135 0.022292733 0.19270787 prediction 0.640085014575959 Functional Gain - PAXIP1-AS2 ENSG00000214106 CDS Human antisense chr7:154735811 chr7:154735807 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_100697 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:154735804-154735825
64251 chr1 156737808 156737808 1 + C A UCEC 156737804 + 156737784 156737824 41 ACCCCAGGCTTCAGCCTCCTCCCCCCTTGCCCTTCGGCCTG ACCCCAGGCTTCAGCCTCCTCCCCACTTGCCCTTCGGCCTG < 41bp 0.435137364053154 0.82002993079181 0.16322434 0.2812428 prediction 0.64005986158362 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156737804 chr1:156737808 nonsynonymous SNV 0.804 2 25 hm5C_associated_SNPs_100698 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:156737791-156737824
64251 chr22 31521711 31521711 1 + C A UCEC 31521707 + 31521687 31521727 41 GACTTCTGTCCCCCACCTTCCGGCCTGGGGCCCCCTCAGGC GACTTCTGTCCCCCACCTTCCGGCATGGGGCCCCCTCAGGC < 41bp 0.436551485431521 0.819987931731645 0.66345155 0.8167064 prediction 0.639975863463291 Functional Gain - INPP5J ENSG00000185133 CDS Human protein_coding chr22:31521707 chr22:31521711 nonsynonymous SNV 0.572 3 25 hm5C_associated_SNPs_100700 0 0 1 HNRNPK POSTAR2 ENCODE chr22:31521696-31521841
64251 chr14 73637673 73637673 1 + T G SKCM 73637670 + 73637650 73637690 41 GCGCCAAGCATGTGATCATGCTCTTTGTCCCTGTGACTCTC GCGCCAAGCATGTGATCATGCTCGTTGTCCCTGTGACTCTC < 41bp 0.470677757073053 0.819740587818631 0.31379676 0.12034199 prediction 0.639481175637261 Functional Gain - PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637670 chr14:73637673 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_100713 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:73637672-73637698
64251 chr3 122419983 122419983 1 + C A LGG 122419979 + 122419959 122419999 41 TGAAGAGAGAGGGCAGACTCCTACCGGGCAATGCCACCATC TGAAGAGAGAGGGCAGACTCCTACAGGGCAATGCCACCATC < 41bp 0.436776715718457 0.819645866462377 0.1634734 0.31137976 prediction 0.639291732924754 Functional Gain - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419979 chr3:122419983 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_100718 0 0 1 FXR2 POSTAR2 ENCODE chr3:122419941-122419990
64251 chr20 42697450 42697450 1 + C A SARC 42697446 + 42697426 42697466 41 CATCGGAGAGAGCAGTGACACACCCATTGCCCGGGGGCTGA CATCGGAGAGAGCAGTGACACACCAATTGCCCGGGGGCTGA < 41bp 0.567777341105196 0.887401809211236 0.17643902 0.33800477 prediction 0.639248936212081 Functional Gain - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42697446 chr20:42697450 synonymous SNV . 0 25 hm5C_associated_SNPs_100720 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:42697431-42697461
64251 chr7 6075760 6075760 1 + C A rs117715040 6075756 + 6075736 6075776 41 AGAGATACGGCACTTCTGGCCAGGCTACTTTATCACACTTA AGAGATACGGCACTTCTGGCCAGGATACTTTATCACACTTA < 41bp 0.453166501103622 0.819579528903694 0.30323714 0.38658366 prediction 0.639159057807388 Functional Gain - ANKRD61 ENSG00000157999 CDS Human protein_coding chr7:6075756 chr7:6075760 nonsynonymous SNV 0.082 2 25 hm5C_associated_SNPs_100721 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr7:6075745-6075777
64251 chr17 76219945 76219945 1 + T G rs17879146 76219942 + 76219922 76219962 41 GAAGTGAGGGAGGAAGAAGGCAGTGTCCCTTTTGCTAGAGC GAAGTGAGGGAGGAAGAAGGCAGGGTCCCTTTTGCTAGAGC < 41bp 0.547154987572192 0.866722600016928 0.488853 0.9021976 prediction 0.639135224889472 Functional Gain - BIRC5 ENSG00000268310 CDS Human other chr17:76219942 chr17:76219945 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_100722 0 1 36 TARDBP POSTAR2 DRA001158,DRS012387 chr17:76219707-76220123
64251 chr9 132632061 132632061 1 + C A STAD 132632057 + 132632037 132632077 41 CCAGAATGTGCCGGCCAAGCCAGGCGCCTGTGGGGACAGCT CCAGAATGTGCCGGCCAAGCCAGGAGCCTGTGGGGACAGCT < 41bp 0.564370082038118 0.883928637599403 0.8561027 0.8868251 prediction 0.63911711112257 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132632057 chr9:132632061 synonymous SNV . 0 25 hm5C_associated_SNPs_100723 0 0 1 FMR1 POSTAR2 ENCODE chr9:132632043-132632110
64251 chrX 48341100 48341100 1 + C A LUAD 48341096 + 48341076 48341116 41 GGCAGCTGGCCAAGGAGATCCGCCCCCAGGACTGCCCCATC GGCAGCTGGCCAAGGAGATCCGCCACCAGGACTGCCCCATC < 41bp 0.57994255835402 0.899484311989507 0.10262412 0.41585073 prediction 0.639083507270974 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48341096 chrX:48341100 nonsynonymous SNV 0.993 1 25 hm5C_associated_SNPs_100726 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48341097-48341118
64251 chr6 30312962 30312962 1 + T G rs201417696 30312959 + 30312939 30312979 41 CGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCCT CGCGGCGGTGATGGCGGGGCCGGGGAAGGACCGCGAGGCCT < 41bp 0.47782363951939 0.819488093314183 0.7830841 0.8970295 prediction 0.638976186628365 Functional Gain - RPP21 ENSG00000241370 CDS Human protein_coding chr6:30312959 chr6:30312962 nonsynonymous SNV 0.962 4 24 hm5C_associated_SNPs_100728 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:30312960-30312980
64251 chr19 50150037 50150037 1 + C A LUAD 50150033 + 50150013 50150053 41 GGGACAGAGATCCCATCCCTCTGCCTGTGCCCAGCCTGCTG GGGACAGAGATCCCATCCCTCTGCATGTGCCCAGCCTGCTG < 41bp 0.570953026489771 0.890199690521455 0.34551796 0.5607338 prediction 0.63849332806337 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50150033 chr19:50150037 nonsynonymous SNV 0.981 2 25 hm5C_associated_SNPs_100739 0 0 15 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:50150020-50150040
64251 chr9 127636001 127636001 1 + C A UCEC 127635997 + 127635977 127636017 41 CATGCTTCGGGCATTCCATGCAGCCTTGCGGAACTCTCCCG CATGCTTCGGGCATTCCATGCAGCATTGCGGAACTCTCCCG < 41bp 0.569022781491041 0.888245151399829 0.4867238 0.3721948 prediction 0.638444739817577 Functional Gain - ARPC5L ENSG00000136950 CDS Human protein_coding chr9:127635997 chr9:127636001 synonymous SNV . 0 25 hm5C_associated_SNPs_100742 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:127635970-127636032
64251 chrX 53223775 53223775 1 - G T SARC 53223779 - 53223759 53223799 41 TCTGTGTGTGTGGGCAGGTGCTGGCTGGGGCGGGAGCTCTG TCTGTGTGTGTGGGCAGGTGCTGGATGGGGCGGGAGCTCTG < 41bp 0.567154474281116 0.886334262998558 0.27557468 0.47011027 prediction 0.638359577434885 Functional Gain - KDM5C ENSG00000126012 CDS Human protein_coding chrX:53223779 chrX:53223775 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_100745 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:53223714-53223795
64251 chr12 120899830 120899830 1 - G T ESCA 120899834 - 120899814 120899854 41 CCACACTACTTCTCTCCTTTCAGGCCCTACTGAGACAGGTG CCACACTACTTCTCTCCTTTCAGGACCTACTGAGACAGGTG < 41bp 0.450896997354627 0.819119704049748 0.5241688 0.7151985 prediction 0.638239408099497 Functional Gain - SRSF9 ENSG00000111786 CDS Human protein_coding chr12:120899834 chr12:120899830 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_100751 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:120899806-120899926
64251 chr6 43098280 43098280 1 + C A UCEC 43098276 + 43098256 43098296 41 CTTTGCCAGGGTGGTGCTGGCACCCCAGGACGTGGTAGTAG CTTTGCCAGGGTGGTGCTGGCACCACAGGACGTGGTAGTAG < 41bp 0.42570268674175 0.819107002364398 0.13089621 0.12490669 prediction 0.638214004728795 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43098276 chr6:43098280 synonymous SNV . 0 25 hm5C_associated_SNPs_100752 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:43098271-43098293
64251 chr1 184020918 184020918 1 + C A rs61739880 184020914 + 184020894 184020934 41 AGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGC AGGAGCGCGGCGATTCCGAGCCGAACCCCGGCTGCAGCGGC < 41bp 0.494060150524187 0.81894793281912 0.23043463 0.3521937 prediction 0.63789586563824 Functional Gain - TSEN15 ENSG00000198860 CDS Human protein_coding chr1:184020914 chr1:184020918 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_100757 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:184020880-184020920
64251 chr7 150069867 150069867 1 + C A rs192436969 150069863 + 150069843 150069883 41 CACCGGCGCATCCACACGGGCGAGCGGCCCTACGCCTGTCC CACCGGCGCATCCACACGGGCGAGAGGCCCTACGCCTGTCC < 41bp 0.539430450369335 0.858288316562175 0.663827 0.8863878 prediction 0.63771573238568 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069863 chr7:150069867 synonymous SNV . 0 25 hm5C_associated_SNPs_100762 0 0 2 METAP2 POSTAR2 ENCODE chr7:150069862-150069903
64251 chr17 80333246 80333246 1 + C A LIHC 80333242 + 80333222 80333262 41 CCGTTCCCTCCCTGCAGCCCCGCGCCCGCTTCCAGCGCTGT CCGTTCCCTCCCTGCAGCCCCGCGACCGCTTCCAGCGCTGT < 41bp 0.512962699732898 0.831807963396877 0.3350745 0.6330927 prediction 0.637690527327958 Functional Gain - UTS2R ENSG00000181408 CDS Human protein_coding chr17:80333242 chr17:80333246 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_100763 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:80333240-80333260
64251 chr7 129396034 129396034 1 + C A rs80150480 129396030 + 129396010 129396050 41 AATCGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCT AATCGTCCTAGACCAGGATACACCAGTGGGAGCAATTTTCT < 41bp 0.453435230093688 0.818574432236924 0.008707523 0.029653788 prediction 0.637148864473848 Functional Gain - NRF1 ENSG00000106459 UTR3 Human protein_coding chr7:129396030 chr7:129396034 . . 0 25 hm5C_associated_SNPs_100779 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129396010-129396041
64251 chr16 2749829 2749829 1 + T G SKCM 2749826 + 2749806 2749846 41 CCCATTGTCCTTGCAGGTGCCTGTGAAGCATGTGTACCGTG CCCATTGTCCTTGCAGGTGCCTGGGAAGCATGTGTACCGTG < 41bp 0.449340248277302 0.818572277212025 0.06368801 0.890483 prediction 0.63714455442405 Functional Gain - KCTD5 ENSG00000167977 CDS Human protein_coding chr16:2749826 chr16:2749829 nonsynonymous SNV 0.949 1 24 hm5C_associated_SNPs_100780 0 0 3 SF3B4 POSTAR2 ENCODE chr16:2749753-2749862
64251 chr2 106471654 106471654 1 + C A CESC 106471650 + 106471630 106471670 41 GTGGTGGCGGGTGAGGAACGCGGCCAACAGGACGGGCTATG GTGGTGGCGGGTGAGGAACGCGGCAAACAGGACGGGCTATG < 41bp 0.571983409535761 0.890526221671378 0.8975551 0.8889431 prediction 0.637085624271234 Functional Gain - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106471650 chr2:106471654 synonymous SNV . 0 25 hm5C_associated_SNPs_100781 0 0 5 GRWD1 POSTAR2 ENCODE chr2:106471588-106471654
64251 chr1 100613719 100613719 1 + T G LGG 100613716 + 100613696 100613736 41 GCCTTGGAGCAGTGGAATTCCATTATTTCCAGCGAATGAGT GCCTTGGAGCAGTGGAATTCCATGATTTCCAGCGAATGAGT < 41bp 0.479925077534161 0.818487458805462 0.14534047 0.13586706 prediction 0.636974917610925 Functional Gain - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100613716 chr1:100613719 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_100786 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:100613719-100613760
64251 chr2 109473334 109473334 1 + C A PAAD 109473330 + 109473310 109473350 41 AAACCTTGTTTTTGGAGTATCAGGCTGTTCCAGTAATATTA AAACCTTGTTTTTGGAGTATCAGGATGTTCCAGTAATATTA < 41bp 0.453143541776622 0.818469948076673 0.67277366 0.890408 prediction 0.636939896153346 Functional Gain - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109473330 chr2:109473334 nonsynonymous SNV 0.981 4 25 hm5C_associated_SNPs_100789 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:109473250-109473356
64251 chr17 76168358 76168358 1 + C A rs576110898 76168354 + 76168334 76168374 41 CTGACAAGTGCCTCAGCTTCCCCCCGGCCCGGGTCAGGCCG CTGACAAGTGCCTCAGCTTCCCCCAGGCCCGGGTCAGGCCG < 41bp 0.453233233507585 0.81837537738764 0.29366943 0.49013394 prediction 0.636750754775279 Functional Gain - SYNGR2 ENSG00000108639 UTR3 Human protein_coding chr17:76168354 chr17:76168358 . . 0 25 hm5C_associated_SNPs_100795 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76168028-76168450
64251 chr3 43744063 43744063 1 + C A UCEC 43744059 + 43744039 43744079 41 GGATTCTTGGCTGCTGCTTACTCGCTGAAGTACCCATCAAG GGATTCTTGGCTGCTGCTTACTCGATGAAGTACCCATCAAG < 41bp 0.570751496789135 0.889043016498284 0.086345226 0.54868364 prediction 0.636583039418297 Functional Gain - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43744059 chr3:43744063 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_100798 0 0 7 EFTUD2 POSTAR2 ENCODE chr3:43744057-43744164
64251 chr17 6023850 6023850 1 + C A LUAD 6023846 + 6023826 6023866 41 GAGGGCAGCTTCCGGCGGCGCGGCCGGCGCTCCCACGACCC GAGGGCAGCTTCCGGCGGCGCGGCAGGCGCTCCCACGACCC < 41bp 0.557170378785586 0.875351764757294 0.9077867 0.9062409 prediction 0.636362771943416 Functional Gain - WSCD1 ENSG00000179314 CDS Human protein_coding chr17:6023846 chr17:6023850 synonymous SNV . 0 25 hm5C_associated_SNPs_100807 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:6023833-6023862
64251 chr7 43827557 43827557 1 + C A GBM 43827553 + 43827533 43827573 41 GGTGTTGGCCGAGCCGGCTCCGTGCGGATGAGGGACTTGCG GGTGTTGGCCGAGCCGGCTCCGTGAGGATGAGGGACTTGCG < 41bp 0.435551425310073 0.818161563035925 0.35133642 0.7748252 prediction 0.63632312607185 Functional Gain - BLVRA ENSG00000106605 CDS Human protein_coding chr7:43827553 chr7:43827557 synonymous SNV . 0 25 hm5C_associated_SNPs_100809 0 0 8 DDX3X POSTAR2 ENCODE chr7:43827515-43827576
64251 chr22 27068482 27068482 1 + T G rs9620624 27068479 + 27068459 27068499 41 GTAGGTGGGACCAGGGAAATCTCTGGGACGTGAGTGTGGAG GTAGGTGGGACCAGGGAAATCTCGGGGACGTGAGTGTGGAG < 41bp 0.485780224648377 0.818093872310899 0.6696743 0.8557749 prediction 0.636187744621797 Functional Gain - MIAT ENSG00000206028;ENSG00000225783 ncRNA_exonic Human other chr22:27068479 chr22:27068482 . . 0 24 hm5C_associated_SNPs_100810 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr22:27068460-27068500
64251 chr11 75438535 75438535 1 + C A LUAD 75438531 + 75438511 75438551 41 GGAACTACATTGCGGGCTTCCACCCCCATGGAGTCCTGGCA GGAACTACATTGCGGGCTTCCACCACCATGGAGTCCTGGCA < 41bp 0.403750882492869 0.818011734401513 0.19875827 0.517246 prediction 0.636023468803027 Functional Gain - MOGAT2 ENSG00000166391 CDS Human protein_coding chr11:75438531 chr11:75438535 nonsynonymous SNV 0.987 4 25 hm5C_associated_SNPs_100816 0 0 1 DDX3X POSTAR2 ENCODE chr11:75438526-75438590
64251 chr19 54609303 54609303 1 + C A rs587640804 54609299 + 54609279 54609319 41 TCCGTCATGATCAACAAGGCCACGCCCTACAACTACCCAGG TCCGTCATGATCAACAAGGCCACGACCTACAACTACCCAGG < 41bp 0.439882687438357 0.818003545263203 0.043355674 0.023346305 prediction 0.636007090526407 Functional Gain - NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54609299 chr19:54609303 nonsynonymous SNV 0.941 4 25 hm5C_associated_SNPs_100817 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:54609258-54609306
64251 chr5 140627157 140627157 1 + C A PAAD 140627153 + 140627133 140627173 41 GTGGACGGCTTCTCTCAGCCCTACCTGCCGCTCCCAGAGGC GTGGACGGCTTCTCTCAGCCCTACATGCCGCTCCCAGAGGC < 41bp 0.446115008897846 0.817990601972101 0.066945255 0.22580105 prediction 0.635981203944202 Functional Gain - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140627153 chr5:140627157 nonsynonymous SNV 0.937 2 25 hm5C_associated_SNPs_100819 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140627101-140627158
64251 chr20 30380588 30380588 1 + C A UCEC 30380584 + 30380564 30380604 41 AATCACCGTCCCCAAGTCACCAGCCTTTGCATTGAAGAACA AATCACCGTCCCCAAGTCACCAGCATTTGCATTGAAGAACA < 41bp 0.421562913116167 0.817874289499044 0.049752295 0.03510043 prediction 0.635748578998088 Functional Gain - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30380584 chr20:30380588 synonymous SNV . 0 25 hm5C_associated_SNPs_100822 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:30380563-30380593
64251 chr6 143792727 143792727 1 + C A UCEC 143792723 + 143792703 143792743 41 AATTGATCACTGTCATTAAACAAGCTGTGCAGAAGGTTTTA AATTGATCACTGTCATTAAACAAGATGTGCAGAAGGTTTTA < 41bp 0.44821555970058 0.817862820762054 0.4379071 0.4218928 prediction 0.635725641524107 Functional Gain - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143792723 chr6:143792727 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_100823 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr6:143792709-143792732
64251 chr1 111442176 111442176 1 + C A rs113959563 111442172 + 111442152 111442192 41 CCCATTGTCGAATTAGTCTCCAGCCTCTAAATAATGCCCAG CCCATTGTCGAATTAGTCTCCAGCATCTAAATAATGCCCAG < 41bp 0.52093431726883 0.838784620162859 0.09551832 0.04319504 prediction 0.635700605788059 Functional Gain - CD53 ENSG00000143119 UTR3 Human protein_coding chr1:111442172 chr1:111442176 . . 0 25 hm5C_associated_SNPs_100824 0 0 2 IGF2BP1 POSTAR2 ENCODE chr1:111442149-111442206
64251 chr1 154298114 154298114 1 + C A rs552544847 154298110 + 154298090 154298130 41 TGGGGAGCCGAGCCGAGCGCCCCCCGCCCCAGCCCCCGGCA TGGGGAGCCGAGCCGAGCGCCCCCAGCCCCAGCCCCCGGCA < 41bp 0.528704543255404 0.846512500159134 0.28332227 0.29802823 prediction 0.635615913807461 Functional Gain - ATP8B2 ENSG00000143515 UTR5 Human protein_coding chr1:154298110 chr1:154298114 . . 0 25 hm5C_associated_SNPs_100827 0 0 10 CSTF2T POSTAR2 ENCODE chr1:154298061-154298125
64251 chr17 46134420 46134420 1 + C A UCEC 46134416 + 46134396 46134436 41 GCCTAGTGGGGAGGACCAGACGGCCCTGTCCCTGGAAGAGT GCCTAGTGGGGAGGACCAGACGGCACTGTCCCTGGAAGAGT < 41bp 0.431966577081533 0.81779545439124 0.5663524 0.515971 prediction 0.635590908782479 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46134416 chr17:46134420 synonymous SNV . 0 25 hm5C_associated_SNPs_100828 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:46134391-46134429
64251 chr11 34074072 34074072 1 + C A rs370335951 34074068 + 34074048 34074088 41 GGCGGCCGCGGGAGCCGGGGCCGCCGCGCCGGCTTCTCAGC GGCGGCCGCGGGAGCCGGGGCCGCAGCGCCGGCTTCTCAGC < 41bp 0.45370583559236 0.817777599715558 0.8428898 0.8748448 prediction 0.635555199431116 Functional Gain - CAPRIN1 ENSG00000135387 CDS Human protein_coding chr11:34074068 chr11:34074072 synonymous SNV . 0 25 hm5C_associated_SNPs_100829 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:34074013-34074081
64251 chr3 10967702 10967702 1 + C A LIHC 10967698 + 10967678 10967718 41 CCCTCGCTCCAGGCCCCGGCCTGGCCTTTATTGCGTACCCC CCCTCGCTCCAGGCCCCGGCCTGGACTTTATTGCGTACCCC < 41bp 0.449621016250774 0.817777488705418 0.26616102 0.44937265 prediction 0.635554977410836 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10967698 chr3:10967702 nonsynonymous SNV 0.723 4 25 hm5C_associated_SNPs_100830 0 0 2 BUD13 POSTAR2 ENCODE chr3:10967646-10967709
64251 chrX 102885150 102885150 1 + T G UCEC 102885147 + 102885127 102885167 41 CATAAGCTTGAAGAAGGAAGCTTTAAAGAAAGGTTGGCTCG CATAAGCTTGAAGAAGGAAGCTTGAAAGAAAGGTTGGCTCG < 41bp 0.470318625211034 0.817766451046167 0.1258375 0.11946517 prediction 0.635532902092335 Functional Gain - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102885147 chrX:102885150 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_100831 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:102885149-102885150
64251 chr16 2871543 2871543 1 + C A rs536996341 2871539 + 2871519 2871559 41 CCAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCGCTAC CCAGAGTGGCATGTCCCAGCCAGAACCCTCCTGGCCGCTAC < 41bp 0.547580880890929 0.865107866887132 0.25393122 0.23877397 prediction 0.635053971992406 Functional Gain - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2871539 chr16:2871543 nonsynonymous SNV 0.003 2 25 hm5C_associated_SNPs_100841 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2871531-2871593
64251 chr19 16436566 16436566 1 + C A rs375247255 16436562 + 16436542 16436582 41 CGGTGGCCCTGGTTTCGGCGCGCCCGGGCCCGGCCTGCATT CGGTGGCCCTGGTTTCGGCGCGCCAGGGCCCGGCCTGCATT < 41bp 0.44985862541874 0.817513015094069 0.18017298 0.39672935 prediction 0.635026030188139 Functional Gain - KLF2 ENSG00000127528 CDS Human protein_coding chr19:16436562 chr19:16436566 synonymous SNV . 0 25 hm5C_associated_SNPs_100842 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:16436552-16436578
64251 chr16 8829607 8829607 1 + T G PAAD 8829605 + 8829585 8829625 41 CCTCAAGGGGTCATGGCCTCCATGTTGCTCGCCCAGCGCCT CCTCAAGGGGTCATGGCCTCCAGGTTGCTCGCCCAGCGCCT < 41bp 0.483272695185399 0.81746539147163 0.12980142 0.873056 prediction 0.63493078294326 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8829605 chr16:8829607 nonsynonymous SNV 0.562 0 23 hm5C_associated_SNPs_100845 0 0 2 DDX3X POSTAR2 ENCODE chr16:8829557-8829662
64251 chr7 143079922 143079922 1 + T G rs144879938 143079919 + 143079899 143079939 41 ATCTGGATATGTGCCCCCACCAGTGGCCACTCCATTCAGTT ATCTGGATATGTGCCCCCACCAGGGGCCACTCCATTCAGTT < 41bp 0.434438666544561 0.817427899685031 0.020879745 0.82884175 prediction 0.634855799370062 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143079919 chr7:143079922 nonsynonymous SNV 0.961 1 24 hm5C_associated_SNPs_100848 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:143079906-143079937
64251 chr12 132281892 132281892 1 + C A COAD 132281888 + 132281868 132281908 41 CCTGTGGAGAGTCGGGGCTCCAGCCAGGAGCGCTCCAGGTA CCTGTGGAGAGTCGGGGCTCCAGCAAGGAGCGCTCCAGGTA < 41bp 0.555787419934133 0.873175436896305 0.3844806 0.38532227 prediction 0.634776033924342 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281888 chr12:132281892 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_100852 0 0 2 PRPF8 POSTAR2 ENCODE chr12:132281864-132281972
64251 chr18 43698193 43698193 1 + C A rs115018280 43698189 + 43698169 43698209 41 CATGGAGAGTGTGAATTTTTCCCCCGCCAATCTCTCTAGCA CATGGAGAGTGTGAATTTTTCCCCAGCCAATCTCTCTAGCA < 41bp 0.424937905947325 0.817357048096637 0.044214994 0.07068947 prediction 0.634714096193274 Functional Gain - HAUS1 ENSG00000152240 CDS Human protein_coding chr18:43698189 chr18:43698193 synonymous SNV . 0 25 hm5C_associated_SNPs_100856 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr18:43698169-43698197
64251 chr4 761927 761927 1 + C A rs190366269 761923 + 761903 761943 41 AGCTGATAGATTTAAATACACAGACGGGCGAGTGGCGCCCG AGCTGATAGATTTAAATACACAGAAGGGCGAGTGGCGCCCG < 41bp 0.517877366591288 0.83522903153933 0.41820848 0.4445726 prediction 0.634703329896084 Functional Gain - PCGF3 ENSG00000249592 ncRNA_intronic Human antisense chr4:761923 chr4:761927 . . 0 25 hm5C_associated_SNPs_100857 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr4:761920-761940
64251 chr22 21134356 21134356 1 + C A OV 21134352 + 21134332 21134372 41 CTTTGCTGAGGCCCAGATAGCTGACTTCTCAGACCCTGCCT CTTTGCTGAGGCCCAGATAGCTGAATTCTCAGACCCTGCCT < 41bp 0.438550545382126 0.817336996152559 0.0522075 0.050844252 prediction 0.634673992305119 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21134352 chr22:21134356 nonsynonymous SNV 0.821 2 25 hm5C_associated_SNPs_100858 0 0 4 RPS3 POSTAR2 ENCODE chr22:21134334-21134374
64251 chr11 63884364 63884364 1 + C A UCEC 63884360 + 63884340 63884380 41 GAGGAGCTGCGGCTGGATGACAACCGCATCTCCACCATCCC GAGGAGCTGCGGCTGGATGACAACAGCATCTCCACCATCCC < 41bp 0.427350371644324 0.817292042733887 0.027234912 0.026035935 prediction 0.634584085467773 Functional Gain - FLRT1 ENSG00000126500 CDS Human protein_coding chr11:63884360 chr11:63884364 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_100862 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:63884333-63884385
64251 chr6 4021681 4021681 1 + T G UCS 4021678 + 4021658 4021698 41 AGATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCA AGATGGCCGCCGCGGAGACCCAGGCGCTACGGGAGCAGCCA < 41bp 0.483126020756705 0.817277164314213 0.22310537 0.8801478 prediction 0.634554328628427 Functional Gain - PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4021678 chr6:4021681 nonsynonymous SNV 0.177 0 24 hm5C_associated_SNPs_100864 0 0 16 AARS POSTAR2 ENCODE chr6:4021660-4021698
64251 chr1 150997137 150997137 1 + C A LUAD 150997133 + 150997113 150997153 41 TAGCAGAGGTGCTAGACCATCGACCCATCGAGCCGAAACAC TAGCAGAGGTGCTAGACCATCGACACATCGAGCCGAAACAC < 41bp 0.423896744356101 0.817240746592676 0.20572513 0.21363142 prediction 0.634481493185352 Functional Gain - PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:150997133 chr1:150997137 nonsynonymous SNV 0.953 1 25 hm5C_associated_SNPs_100867 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:150997113-150997143
64251 chrX 47088476 47088476 1 + C A rs113461071 47088472 + 47088452 47088492 41 CACACTGAGGCCAGGTCTACCCCCCATCATACCAGCCCCCA CACACTGAGGCCAGGTCTACCCCCAATCATACCAGCCCCCA < 41bp 0.429517030258756 0.817189882685392 0.05674967 0.05168268 prediction 0.634379765370783 Functional Gain - CDK16 ENSG00000102225 UTR3 Human protein_coding chrX:47088472 chrX:47088476 . . 0 25 hm5C_associated_SNPs_100871 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:47088389-47088565
64251 chr13 114201650 114201650 1 + C A UCEC 114201646 + 114201626 114201666 41 TTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGTGTT TTCCCCACGTTTGTGGCGTACGAGATCACGGTGCTGGTGTT < 41bp 0.564706045554281 0.881871490922402 0.42312336 0.47407466 prediction 0.634330890736241 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114201646 chr13:114201650 nonsynonymous SNV 0.061 1 25 hm5C_associated_SNPs_100872 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr13:114201639-114201660
64251 chr11 44102762 44102762 1 + C A STAD 44102758 + 44102738 44102778 41 ATGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAAACCA ATGTCTGGGCTCCGCTTTGGCACGATGTACACAGAAAACCA < 41bp 0.559535700367818 0.876697899443347 0.38744938 0.2929256 prediction 0.634324398151057 Functional Gain - ACCS ENSG00000110455 CDS Human protein_coding chr11:44102758 chr11:44102762 nonsynonymous SNV 0.822 5 25 hm5C_associated_SNPs_100873 0 0 4 EFTUD2 POSTAR2 ENCODE chr11:44102660-44102771
64251 chr19 36430892 36430892 1 + C A UCEC 36430888 + 36430868 36430908 41 AACGTCAACACGTTGGGCCTCGACCACAACCTGCTGGCTTC AACGTCAACACGTTGGGCCTCGACAACAACCTGCTGGCTTC < 41bp 0.434888063174303 0.817110373984413 0.3497964 0.45003706 prediction 0.634220747968826 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430888 chr19:36430892 nonsynonymous SNV 0.972 3 25 hm5C_associated_SNPs_100876 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36430879-36430917
64251 chr6 27114961 27114961 1 + C A UCEC 27114957 + 27114937 27114977 41 AGCTCGCGCCAAGGCCAAGACCCGCTCTTCTCGGGCTGGGC AGCTCGCGCCAAGGCCAAGACCCGATCTTCTCGGGCTGGGC < 41bp 0.459613476976981 0.817068743061353 0.26720718 0.4006298 prediction 0.634137486122706 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114957 chr6:27114961 synonymous SNV . 0 25 hm5C_associated_SNPs_100877 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr7 156976675 156976675 1 + C A COAD 156976671 + 156976651 156976691 41 CAGCGCGAGCTGTCACGACTCAGCCAGTGACTCTGAGGAGG CAGCGCGAGCTGTCACGACTCAGCAAGTGACTCTGAGGAGG < 41bp 0.45164681681375 0.817050959167487 0.06508562 0.2868551 prediction 0.634101918334974 Functional Gain - UBE3C ENSG00000009335 CDS Human protein_coding chr7:156976671 chr7:156976675 synonymous SNV . 0 25 hm5C_associated_SNPs_100879 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:156976635-156976693
64251 chr7 54617660 54617660 1 + C A LUAD 54617656 + 54617636 54617676 41 AGCTTCAGGAACACAAGGCCCAGGCCTATCTGAAAGTCAAT AGCTTCAGGAACACAAGGCCCAGGACTATCTGAAAGTCAAT < 41bp 0.434395856531267 0.817045718839866 0.33237472 0.2803973 prediction 0.634091437679732 Functional Gain - VSTM2A ENSG00000170419 CDS Human protein_coding chr7:54617656 chr7:54617660 nonsynonymous SNV 0.904 3 25 hm5C_associated_SNPs_100880 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:54617660-54617680
64251 chr4 71555168 71555168 1 + C A COAD 71555164 + 71555144 71555184 41 GGTGGAACAAGGGATCATTCCACCCGGAAAAGGAAGCCAAT GGTGGAACAAGGGATCATTCCACCAGGAAAAGGAAGCCAAT < 41bp 0.573649915102815 0.890669285126487 0.82187265 0.8825326 prediction 0.634038740047345 Functional Gain - UTP3 ENSG00000132467 CDS Human protein_coding chr4:71555164 chr4:71555168 synonymous SNV . 0 25 hm5C_associated_SNPs_100882 0 0 1 ZNF622 POSTAR2 ENCODE chr4:71555116-71555179
64251 chr17 77020184 77020184 1 + C A rs191809468 77020180 + 77020160 77020200 41 CTGAGGCGCGGCGCGGGGCACACACGGTTAATCCTCCGCGG CTGAGGCGCGGCGCGGGGCACACAAGGTTAATCCTCCGCGG < 41bp 0.514563083662321 0.83143239416287 0.39541245 0.80526745 prediction 0.633738621001098 Functional Gain - C1QTNF1-AS1 ENSG00000173918 UTR5 Human protein_coding chr17:77020180 chr17:77020184 . . 0 25 hm5C_associated_SNPs_100890 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr17:77020182-77020212
64251 chr19 1434803 1434803 1 + C A COAD 1434799 + 1434779 1434819 41 AGACCCCAGCCAGCAGCCTCCTTCCTACGGGGGTCCCTCCG AGACCCCAGCCAGCAGCCTCCTTCATACGGGGGTCCCTCCG < 41bp 0.430326900864115 0.816809384669956 0.12737617 0.9191154 prediction 0.633618769339912 Functional Gain - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434799 chr19:1434803 synonymous SNV . 0 25 hm5C_associated_SNPs_100895 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr19 4305974 4305974 1 + C A UCEC 4305970 + 4305950 4305990 41 TGAGGAAGATCATCAAAACACTGGCTGTGAAGAATGAAGAA TGAGGAAGATCATCAAAACACTGGATGTGAAGAATGAAGAA < 41bp 0.574671845525947 0.891462212093864 0.098002374 0.12217656 prediction 0.633580733135834 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4305970 chr19:4305974 nonsynonymous SNV 0.137 4 25 hm5C_associated_SNPs_100896 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr19:4305917-4305978
64251 chr8 126369489 126369489 1 + C A rs184167565 126369485 + 126369465 126369505 41 TCTTCAAGCTGACAGAGAAGCTGACGGAACAGAAGGAGTGG TCTTCAAGCTGACAGAGAAGCTGAAGGAACAGAAGGAGTGG < 41bp 0.438181435962873 0.816764851978755 0.18601513 0.39957607 prediction 0.633529703957509 Functional Gain - NSMCE2 ENSG00000156831 CDS Human protein_coding chr8:126369485 chr8:126369489 nonsynonymous SNV 0.860 0 25 hm5C_associated_SNPs_100898 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:126369464-126369490
64251 chr2 99226303 99226303 1 + C A LAML 99226299 + 99226279 99226319 41 CAGGGATGCGGCAAGACACACAGCCGGAGCGAAACGCTACA CAGGGATGCGGCAAGACACACAGCAGGAGCGAAACGCTACA < 41bp 0.559035548803105 0.875736743033241 0.3965327 0.6883966 prediction 0.633402388460272 Functional Gain - UNC50 ENSG00000115446 CDS Human protein_coding chr2:99226299 chr2:99226303 synonymous SNV . 0 25 hm5C_associated_SNPs_100903 0 0 1 DDX3X POSTAR2 ENCODE chr2:99226236-99226303
64251 chr4 184585067 184585067 1 + C A COAD 184585063 + 184585043 184585083 41 TCCCTGTGGAATTATGTTGCCGGCCTATGGCCTTTGTTACT TCCCTGTGGAATTATGTTGCCGGCATATGGCCTTTGTTACT < 41bp 0.432275085788915 0.816658072153868 0.30062366 0.4999352 prediction 0.633316144307736 Functional Gain - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184585063 chr4:184585067 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_100904 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:184585048-184585072
64251 chr19 49514510 49514510 1 + C A GBM 49514506 + 49514486 49514526 41 AGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATG AGAGCTTCTCCTTCCTCAACCGGGACCTGGAGAGTGACATG < 41bp 0.570274638006522 0.886719023917422 0.6802521 0.8934487 prediction 0.6328887718218 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49514506 chr19:49514510 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_100914 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49514479-49514523
64251 chr1 160319417 160319417 1 + C A STAD 160319413 + 160319393 160319433 41 GTCCTTGACCAAGCCCAGTCCTGCCTCAGGCTTCTCTCCTA GTCCTTGACCAAGCCCAGTCCTGCATCAGGCTTCTCTCCTA < 41bp 0.587687682568292 0.904087357162712 0.037400246 0.19847965 prediction 0.63279934918884 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160319413 chr1:160319417 synonymous SNV . 0 25 hm5C_associated_SNPs_100916 0 0 7 DDX6 POSTAR2 ENCODE chr1:160319388-160319436
64251 chr15 41865552 41865552 1 + C A THCA 41865548 + 41865528 41865568 41 TGTGTGGCTGACTTCGGACTCTCCCGGAAGATCTACAGTGG TGTGTGGCTGACTTCGGACTCTCCAGGAAGATCTACAGTGG < 41bp 0.404101532497692 0.816292360200797 0.12640265 0.91236997 prediction 0.632584720401594 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41865548 chr15:41865552 synonymous SNV . 0 25 hm5C_associated_SNPs_100925 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr15:41865529-41865552
64251 chr12 98995251 98995251 1 + C A OV 98995247 + 98995227 98995267 41 AGGTCTACTTCAGACTTCCTCGCCCTCCTCCACCCGAGATG AGGTCTACTTCAGACTTCCTCGCCATCCTCCACCCGAGATG < 41bp 0.571017552596353 0.887287184321677 0.12581849 0.18325242 prediction 0.632539263450649 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995247 chr12:98995251 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_100928 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:98995162-98995318
64251 chr5 40681181 40681181 1 + T G ESCA 40681179 + 40681159 40681199 41 ACCATCCCGGCGGTGATGTTCATCTTCGGGGTGGTGGGCAA ACCATCCCGGCGGTGATGTTCAGCTTCGGGGTGGTGGGCAA < 41bp 0.493097842094675 0.816243419489462 0.29662225 0.8046657 prediction 0.632486838978923 Functional Gain - PTGER4 ENSG00000171522 CDS Human protein_coding chr5:40681179 chr5:40681181 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_100929 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:40681176-40681203
64251 chr6 20402547 20402547 1 + C A STAD 20402543 + 20402523 20402563 41 GGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGG GGGGGCGGCTGTCGTCGCCGCCGCAGCTGCAGCCTCCATGG < 41bp 0.458332363303085 0.816118522343408 0.32724938 0.2601564 prediction 0.632237044686817 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402543 chr6:20402547 synonymous SNV . 0 25 hm5C_associated_SNPs_100935 0 0 6 CSTF2T POSTAR2 ENCODE chr6:20402501-20402548
64251 chr3 160970600 160970600 1 + T G UCEC 160970597 + 160970577 160970617 41 GCTGATTTAGAGTCAGAAGTCACTGAGGGGCCAAGTGTGGT GCTGATTTAGAGTCAGAAGTCACGGAGGGGCCAAGTGTGGT < 41bp 0.478145531000011 0.816069292834788 0.07052067 0.18410176 prediction 0.632138585669577 Functional Gain - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160970597 chr3:160970600 synonymous SNV . 0 24 hm5C_associated_SNPs_100938 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:160970584-160970607
64251 chr1 26581765 26581765 1 + C A OV 26581761 + 26581741 26581781 41 TTCTACTTTAGGGACCTCTCCTGCCAAGCCAAATTCTACAC TTCTACTTTAGGGACCTCTCCTGCAAAGCCAAATTCTACAC < 41bp 0.399449192760844 0.816019031680138 0.04737237 0.12410116 prediction 0.632038063360276 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26581761 chr1:26581765 synonymous SNV . 0 25 hm5C_associated_SNPs_100942 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:26581755-26581784
64251 chr20 39657517 39657517 1 + C A rs140822387 39657513 + 39657493 39657533 41 TGGGGTCTGTTCTCGCCGCCCGCCCGGCAGTCAGGCAGCGT TGGGGTCTGTTCTCGCCGCCCGCCAGGCAGTCAGGCAGCGT < 41bp 0.539691847211266 0.855706456297671 0.111726075 0.10908547 prediction 0.632029218172809 Functional Gain - TOP1 ENSG00000198900 UTR5 Human protein_coding chr20:39657513 chr20:39657517 . . 0 25 hm5C_associated_SNPs_100944 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:39657480-39657520
64251 chr20 20350334 20350334 1 + C A LUSC 20350330 + 20350310 20350350 41 CAGGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTACAG CAGGTGTTCCCCTGCAAGTACTGCACGGCCACCTTCTACAG < 41bp 0.435870187289589 0.815872037431557 0.28256312 0.31304926 prediction 0.631744074863114 Functional Gain - INSM1 ENSG00000173404 CDS Human protein_coding chr20:20350330 chr20:20350334 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_100948 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:20350323-20350350
64251 chr16 57785893 57785893 1 + T G SKCM 57785890 + 57785870 57785910 41 GGCAAGATGATGTCTGAGTTCCCTGGTCACACGGGGCCTGT GGCAAGATGATGTCTGAGTTCCCGGGTCACACGGGGCCTGT < 41bp 0.441298516071455 0.815854617346986 0.17492929 0.7331174 prediction 0.631709234693971 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57785890 chr16:57785893 synonymous SNV . 0 24 hm5C_associated_SNPs_100949 0 0 1 METAP2 POSTAR2 ENCODE chr16:57785885-57785962
64251 chr9 123917154 123917154 1 + C A KIRC 123917150 + 123917130 123917170 41 TCAGGGAAGCTGACCGACTCCTGGCAGAGGCTGAGAGTGAA TCAGGGAAGCTGACCGACTCCTGGAAGAGGCTGAGAGTGAA < 41bp 0.427032173997913 0.815854134708974 0.1045647 0.2401562 prediction 0.631708269417949 Functional Gain - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123917150 chr9:123917154 nonsynonymous SNV 0.896 0 25 hm5C_associated_SNPs_100950 0 0 1 UCHL5 POSTAR2 ENCODE chr9:123917122-123917159
64251 chr3 129023491 129023491 1 + C A rs147986626 129023487 + 129023467 129023507 41 GCAGTGGTTGGCCACAAAGTCACCCAAAAAGGAAGACTCAA GCAGTGGTTGGCCACAAAGTCACCAAAAAAGGAAGACTCAA < 41bp 0.41656266080977 0.815849303447277 0.17583025 0.16200843 prediction 0.631698606894554 Functional Gain - HMCES ENSG00000183624 CDS Human protein_coding chr3:129023487 chr3:129023491 synonymous SNV . 0 25 hm5C_associated_SNPs_100952 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr3:129023490-129023491
64251 chr21 38072073 38072073 1 + C A LUSC 38072069 + 38072049 38072089 41 GAAGGAGAAGTCCAAGAATGCGGCCAAGACCAGGAGGGAGA GAAGGAGAAGTCCAAGAATGCGGCAAAGACCAGGAGGGAGA < 41bp 0.45091670374483 0.815846446427539 0.474489 0.5561129 prediction 0.631692892855077 Functional Gain - SIM2 ENSG00000159263 CDS Human protein_coding chr21:38072069 chr21:38072073 synonymous SNV . 0 25 hm5C_associated_SNPs_100953 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr21:38072048-38072075
64251 chr5 137803155 137803155 1 + T G rs141771089 137803152 + 137803132 137803172 41 CCCCCCCACGAACGCCCTTACGCTTGCCCAGTGGAGTCCTG CCCCCCCACGAACGCCCTTACGCGTGCCCAGTGGAGTCCTG < 41bp 0.455096175190191 0.815774054303629 0.173666 0.28628075 prediction 0.631548108607257 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803152 chr5:137803155 synonymous SNV . 0 24 hm5C_associated_SNPs_100955 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137803140-137803180
64251 chr22 42289163 42289163 1 + C A KIRP 42289159 + 42289139 42289179 41 GCCCAGAGCCTGTGTGGCCCCGAGCACAGTGCTGTTCCTGA GCCCAGAGCCTGTGTGGCCCCGAGAACAGTGCTGTTCCTGA < 41bp 0.560522910725076 0.876268021190049 0.16087115 0.31902295 prediction 0.631490220929946 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42289159 chr22:42289163 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_100956 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr22:42289162-42289163
64251 chr17 72764334 72764334 1 + C A LUSC 72764330 + 72764310 72764350 41 GAGGCAGCCTTGGAGAGCCCCAGGCCAGCCCTGGTGAGATC GAGGCAGCCTTGGAGAGCCCCAGGACAGCCCTGGTGAGATC < 41bp 0.5679821611963 0.883547347433142 0.86674774 0.8953369 prediction 0.631130372473684 Functional Gain - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764330 chr17:72764334 nonsynonymous SNV 0.891 0 25 hm5C_associated_SNPs_100964 0 0 2 PPIG POSTAR2 ENCODE chr17:72764309-72764372
64251 chr5 1038700 1038700 1 + C A rs114282654 1038696 + 1038676 1038716 41 CCCAGGCGCCCTCTGCTCTTCTGCCCTCGATGCCACATGGC CCCAGGCGCCCTCTGCTCTTCTGCACTCGATGCCACATGGC < 41bp 0.51923139493775 0.83477451137464 0.091992974 0.0860506 prediction 0.63108623287378 Functional Gain - NKD2 ENSG00000145506 CDS Human protein_coding chr5:1038696 chr5:1038700 synonymous SNV . 0 25 hm5C_associated_SNPs_100967 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:1038661-1038704
64251 chr19 56163822 56163822 1 + C A STAD 56163818 + 56163798 56163838 41 AAGGACGCCGACGGGGTCCTCTGCCGGTACAAGAAGATCCT AAGGACGCCGACGGGGTCCTCTGCAGGTACAAGAAGATCCT < 41bp 0.568217933313299 0.88375363251927 0.18804836 0.39168823 prediction 0.631071398411942 Functional Gain - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56163818 chr19:56163822 synonymous SNV . 0 25 hm5C_associated_SNPs_100969 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56163793-56163823
64251 chr4 85525505 85525505 1 + T G KIRC 85525502 + 85525482 85525522 41 CCCTGAGATTCTCAAAAAAGCTCTATCTGGTTTATCTTCAA CCCTGAGATTCTCAAAAAAGCTCGATCTGGTTTATCTTCAA < 41bp 0.471405901632078 0.815445566586327 0.8546585 0.22060713 prediction 0.630891133172654 Functional Gain - CDS1 ENSG00000163624 CDS Human protein_coding chr4:85525502 chr4:85525505 nonsynonymous SNV 0.981 4 24 hm5C_associated_SNPs_100973 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:85525472-85525510
64251 chr19 58131588 58131588 1 + T G rs199570382 58131585 + 58131565 58131605 41 TGAACAGAGCATTTCTATAGCAGTGTCACATGTTAATACTT TGAACAGAGCATTTCTATAGCAGGGTCACATGTTAATACTT < 41bp 0.448538404032324 0.815423968921474 0.29600364 0.922987 prediction 0.630847937842948 Functional Gain - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58131585 chr19:58131588 nonsynonymous SNV 0.845 1 24 hm5C_associated_SNPs_100974 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:58131538-58131597
64251 chr2 241569984 241569984 1 + C A LIHC 241569980 + 241569960 241570000 41 CCTGGCCCAGAGGCCACCCACCGACGTGGGGCAGGCAGAGG CCTGGCCCAGAGGCCACCCACCGAAGTGGGGCAGGCAGAGG < 41bp 0.447711911664461 0.815410551308686 0.21948531 0.38072193 prediction 0.630821102617372 Functional Gain - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569980 chr2:241569984 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_100976 0 0 1 RPS3 POSTAR2 ENCODE chr2:241569941-241570000
64251 chr18 72776610 72776610 1 + T G rs12326956 72776607 + 72776587 72776627 41 CCAGGCGCCCACAGAGGGTACCGTGGGCTGGGCCTCGGGGA CCAGGCGCCCACAGAGGGTACCGGGGGCTGGGCCTCGGGGA < 41bp 0.50879959325114 0.82416259890889 0.86323965 0.92798185 prediction 0.630726011315499 Functional Gain - ZNF407 ENSG00000215421 UTR3 Human protein_coding chr18:72776607 chr18:72776610 . . 0 24 hm5C_associated_SNPs_100978 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:72776600-72776626
64251 chr22 24121481 24121481 1 + C A ACC 24121477 + 24121457 24121497 41 CACGCAGGAAGCCCCCCGGCCTGCCAGCAGCCTCAGGCCTC CACGCAGGAAGCCCCCCGGCCTGCAAGCAGCCTCAGGCCTC < 41bp 0.431262888548879 0.815339425726594 0.14747474 0.24722627 prediction 0.630678851453189 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24121477 chr22:24121481 synonymous SNV . 0 25 hm5C_associated_SNPs_100980 0 0 2 BUD13 POSTAR2 ENCODE chr22:24121469-24121525
64251 chr4 158057679 158057679 1 + C A UCEC 158057675 + 158057655 158057695 41 GGAATGACCCCAGGCTGAAGCTCCCCAGTGATTTTAGGGGT GGAATGACCCCAGGCTGAAGCTCCACAGTGATTTTAGGGGT < 41bp 0.404096457640285 0.81531638380013 0.06803435 0.5398718 prediction 0.630632767600261 Functional Gain - GLRB ENSG00000109738 CDS Human protein_coding chr4:158057675 chr4:158057679 nonsynonymous SNV 0.987 3 25 hm5C_associated_SNPs_100982 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:158057662-158057684
64251 chr8 145583505 145583505 1 + C A rs117500243 145583501 + 145583481 145583521 41 ATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGCTGGCACTG ATTCTGTGGCCTTCTTAGCACTGGACTTTGTGCTGGCACTG < 41bp 0.559072947925352 0.87438246916952 0.12884 0.1294933 prediction 0.630619042488335 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583501 chr8:145583505 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_100983 1 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr8:145583486-145583519
64251 chr19 46174549 46174549 1 + C A CESC 46174545 + 46174525 46174565 41 CCCCGTGCCCACCCCCAGGCCTCGCCTGTAACGGGTCCTTC CCCCGTGCCCACCCCCAGGCCTCGACTGTAACGGGTCCTTC < 41bp 0.419730475020291 0.815296486699272 0.045523793 0.11775473 prediction 0.630592973398544 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46174545 chr19:46174549 nonsynonymous SNV 0.925 0 25 hm5C_associated_SNPs_100984 0 0 1 RBM15 POSTAR2 ENCODE chr19:46174500-46174554
64251 chr1 227922918 227922918 1 - A C rs2295994 227922921 - 227922901 227922941 41 CACTTCCGAGGCCTGGGGGTCGATGTCCCCGGCGTCGGCCA CACTTCCGAGGCCTGGGGGTCGAGGTCCCCGGCGTCGGCCA < 41bp 0.49938652141132 0.815217576627445 0.4139446 0.9052057 prediction 0.630435153254889 Functional Gain - JMJD4 ENSG00000081692 CDS Human protein_coding chr1:227922921 chr1:227922918 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_100988 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:227922900-227922920
64251 chr17 7534931 7534931 1 + C A rs145273466 7534927 + 7534907 7534947 41 CTGGTTCCTGCCCTGGATGGCTGCCTGCGCCGGGATTCCTG CTGGTTCCTGCCCTGGATGGCTGCATGCGCCGGGATTCCTG < 41bp 0.520582863745395 0.835738154395039 0.25083345 0.85225236 prediction 0.630310581299287 Functional Gain - SHBG ENSG00000129214 CDS Human protein_coding chr17:7534927 chr17:7534931 nonsynonymous SNV 0.056 2 25 hm5C_associated_SNPs_100992 0 0 1 SND1 POSTAR2 ENCODE chr17:7534906-7534992
64251 chr11 61897294 61897294 1 + C A SKCM 61897290 + 61897270 61897310 41 TCTCGGAGCAGCCAGCTGAGCTCCCGACGCCTCCGCAGCAA TCTCGGAGCAGCCAGCTGAGCTCCAGACGCCTCCGCAGCAA < 41bp 0.587750889927077 0.90290387274542 0.102214366 0.8547032 prediction 0.630305965636686 Functional Gain - INCENP ENSG00000149503 CDS Human protein_coding chr11:61897290 chr11:61897294 synonymous SNV . 0 25 hm5C_associated_SNPs_100993 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:61897280-61897311
64251 chr2 241531369 241531369 1 + C A LUSC 241531365 + 241531345 241531385 41 CCTAGGGTCCATGGGTCCTACGAGCACCTGTGGGCCGGGCA CCTAGGGTCCATGGGTCCTACGAGAACCTGTGGGCCGGGCA < 41bp 0.555526655437089 0.87064013933203 0.35321862 0.5954951 prediction 0.630226967789882 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241531365 chr2:241531369 nonsynonymous SNV 0.947 1 25 hm5C_associated_SNPs_100995 0 0 6 BUD13 POSTAR2 ENCODE chr2:241531308-241531388
64251 chr16 84793532 84793532 1 + T G HNSC 84793529 + 84793509 84793549 41 GAATGAGTTCACTAATATGCCAGTACCTCCAAAACCCCGAC GAATGAGTTCACTAATATGCCAGGACCTCCAAAACCCCGAC < 41bp 0.453352955893042 0.815076797766449 0.03394392 0.023756087 prediction 0.630153595532898 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84793529 chr16:84793532 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_100996 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:84793511-84793540
64251 chr19 49646104 49646104 1 + C A CESC 49646100 + 49646080 49646120 41 CCTGGTATGTGGCCGCCTGCCGGGCCAATGTCAAGAGCGGT CCTGGTATGTGGCCGCCTGCCGGGACAATGTCAAGAGCGGT < 41bp 0.559462482582901 0.874505435404982 0.5434992 0.5537824 prediction 0.630085905644163 Functional Gain - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49646100 chr19:49646104 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_100997 0 0 2 EIF3H POSTAR2 ENCODE chr19:49646061-49646158
64251 chr14 102348593 102348593 1 + C A UCEC 102348589 + 102348569 102348609 41 AGATGAACCAACGTTAGAAGCAGCCTGGCCTCATCTACAGG AGATGAACCAACGTTAGAAGCAGCATGGCCTCATCTACAGG < 41bp 0.423085248970447 0.814972836801543 0.1636926 0.20161557 prediction 0.629945673603086 Functional Gain - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102348589 chr14:102348593 synonymous SNV . 0 25 hm5C_associated_SNPs_101003 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:102348553-102348593
64251 chr3 112968705 112968705 1 + C A COAD 112968701 + 112968681 112968721 41 GAATGAGGCCTGAGGTCACACTGGCTTGCCTCCTCCTAGCC GAATGAGGCCTGAGGTCACACTGGATTGCCTCCTCCTAGCC < 41bp 0.558879404659467 0.873849401291123 0.3395967 0.43536383 prediction 0.629939993263312 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112968701 chr3:112968705 nonsynonymous SNV 0.200 1 25 hm5C_associated_SNPs_101004 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:112968664-112968716
64251 chr12 69652416 69652416 1 + T G BLCA 69652414 + 69652394 69652434 41 CCTTAGGTCCTCCAGGCCCACCTGGTCCACCAGGTCCTCCA CCTTAGGTCCTCCAGGCCCACCGGGTCCACCAGGTCCTCCA < 41bp 0.516304650070874 0.831264096070839 0.15851054 0.8886316 prediction 0.62991889199993 Functional Gain - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69652414 chr12:69652416 synonymous SNV . 0 23 hm5C_associated_SNPs_101005 0 0 15 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:69652360-69652420
64251 chr6 111498506 111498506 1 + T G LUAD 111498503 + 111498483 111498523 41 CTTCATTGGTCATTTTGGGACACTATTTCAAGAAGCGCCTT CTTCATTGGTCATTTTGGGACACGATTTCAAGAAGCGCCTT < 41bp 0.552059907679544 0.866974908926054 0.036180586 0.046123892 prediction 0.629830002493019 Functional Gain - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111498503 chr6:111498506 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_101007 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:111498480-111498520
64251 chr9 96416722 96416722 1 + C A STAD 96416718 + 96416698 96416738 41 GAGAAGACCTTCTATCTCATCAGGCCGGCCTCGGCCAACAT GAGAAGACCTTCTATCTCATCAGGACGGCCTCGGCCAACAT < 41bp 0.572566755310057 0.887471199383985 0.9046664 0.9045786 prediction 0.629808888147855 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96416718 chr9:96416722 nonsynonymous SNV 0.804 4 25 hm5C_associated_SNPs_101009 0 0 2 YBX3 POSTAR2 ENCODE chr9:96416708-96416773
64251 chr15 65903730 65903730 1 + C A rs75265841 65903726 + 65903706 65903746 41 TCGAGCCTTGGCTGGGTTTCCTGCCGTGTCTCTCTGCATTG TCGAGCCTTGGCTGGGTTTCCTGCAGTGTCTCTCTGCATTG < 41bp 0.545702643027917 0.860553568258236 0.14271751 0.36993673 prediction 0.629701850460637 Functional Gain - INTS14;SLC24A1 ENSG00000074621;ENSG00000138614 upstream Human other chr15:65903726 chr15:65903730 . . 0 25 hm5C_associated_SNPs_101012 0 0 1 PCBP2 POSTAR2 ENCODE chr15:65903727-65903827
64251 chr17 30687743 30687743 1 + C A KIRP 30687739 + 30687719 30687759 41 GTTATATTCCTCCAATGGCACAGCCAGGACTGCCACCAGTA GTTATATTCCTCCAATGGCACAGCAAGGACTGCCACCAGTA < 41bp 0.421875136481846 0.814780120734819 0.20307425 0.7254161 prediction 0.629560241469638 Functional Gain - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687739 chr17:30687743 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_101015 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30687620-30687756
64251 chr22 18640467 18640467 1 + C A GBM 18640463 + 18640443 18640483 41 TTTGGGCTCCTGAGGCAAATCTGTCAGTCCATCCTGGCTGA TTTGGGCTCCTGAGGCAAATCTGTAAGTCCATCCTGGCTGA < 41bp 0.573722637245922 0.88838933827249 0.111671925 0.34817874 prediction 0.629333402053135 Functional Gain - USP18 ENSG00000184979 CDS Human protein_coding chr22:18640463 chr22:18640467 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_101018 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr22:18640442-18640478
64251 chr10 77167870 77167870 1 + C A rs533708261 77167866 + 77167846 77167886 41 CAGCAAAGGCTAGCAAAACCCCGCCGCGGCGCGCTCGGCCC CAGCAAAGGCTAGCAAAACCCCGCAGCGGCGCGCTCGGCCC < 41bp 0.524568060454302 0.839206766050281 0.25462207 0.33305466 prediction 0.629277411191958 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167866 chr10:77167870 . . 0 25 hm5C_associated_SNPs_101019 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:77167862-77167894
64251 chr20 31606541 31606541 1 + C A ESCA 31606537 + 31606517 31606557 41 GGGTACCGAGGGCTCCATGGCCACCGTGGGCCTCTCCCAGC GGGTACCGAGGGCTCCATGGCCACAGTGGGCCTCTCCCAGC < 41bp 0.424063647107222 0.814597525325779 0.33042598 0.51320183 prediction 0.629195050651558 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31606537 chr20:31606541 synonymous SNV . 0 25 hm5C_associated_SNPs_101020 0 0 1 RPS3 POSTAR2 ENCODE chr20:31606509-31606547
64251 chr12 105501598 105501598 1 + C A rs187427903 105501594 + 105501574 105501614 41 GGGTGATGGCGGTGGAGACTCTGTCCCCGGACTGGGAGTTT GGGTGATGGCGGTGGAGACTCTGTACCCGGACTGGGAGTTT < 41bp 0.451182708322143 0.814505362456161 0.2128492 0.12801561 prediction 0.629010724912322 Functional Gain - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105501594 chr12:105501598 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_101022 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:105501596-105501621
64251 chr2 48010496 48010496 1 + C A rs34014629 48010492 + 48010472 48010512 41 GCCGCCGCTGCCCCCGGGGCCTCTCCTTCCCCAGGCGGGGA GCCGCCGCTGCCCCCGGGGCCTCTACTTCCCCAGGCGGGGA < 41bp 0.463873538157393 0.814410800589311 0.31503624 0.55226594 prediction 0.628821601178623 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48010492 chr2:48010496 nonsynonymous SNV 0.613 1 25 hm5C_associated_SNPs_101027 0 0 17 EIF3G POSTAR2 GSE65004,GSM1585675 chr2:48010480-48010500
64251 chr17 39847294 39847294 1 + C A rs3209306 39847290 + 39847270 39847310 41 TCCCTCATTTAAACAGAGGTCAAGCAATAGGCGCCTGGCAG TCCCTCATTTAAACAGAGGTCAAGAAATAGGCGCCTGGCAG < 41bp 0.486347533587838 0.814382314307348 0.07864851 0.23893183 prediction 0.628764628614696 Functional Gain - EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847290 chr17:39847294 . . 0 25 hm5C_associated_SNPs_101029 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:39847031-39847364
64251 chr21 34923471 34923471 1 + C A UCEC 34923467 + 34923447 34923487 41 GGGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGTGGCG GGGCGCCAGAGTTGCCTGGGCAGCATGTGGCAACTGTGGCG < 41bp 0.453651245791849 0.814284144261396 0.47768986 0.4123935 prediction 0.628568288522793 Functional Gain - SON ENSG00000159140 CDS Human protein_coding chr21:34923467 chr21:34923471 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101034 0 0 43 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34923163-34923531
64251 chrX 40464916 40464916 1 + T G LUAD 40464913 + 40464893 40464933 41 AATGATCGCCTTGGCCTTGGCTGTGATTATCACCTCTTACA AATGATCGCCTTGGCCTTGGCTGGGATTATCACCTCTTACA < 41bp 0.462411155644565 0.814115637125711 0.06266314 0.40439633 prediction 0.628231274251421 Functional Gain - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40464913 chrX:40464916 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_101044 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:40464875-40464923
64251 chr16 28878696 28878696 1 + C A LUAD 28878692 + 28878672 28878712 41 CATCCCCTGCTCTTCTATCACAGACGTCCGGACAACCACAG CATCCCCTGCTCTTCTATCACAGAAGTCCGGACAACCACAG < 41bp 0.425682594120206 0.813877800467162 0.9354928 0.9267609 prediction 0.627755600934324 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28878692 chr16:28878696 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_101056 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28878680-28878700
64251 chr4 110415815 110415815 1 + C A UCEC 110415811 + 110415791 110415831 41 AGCAGTCCTGCTCCTGATCCCGCCCCTGAACCTGATCCTGC AGCAGTCCTGCTCCTGATCCCGCCACTGAACCTGATCCTGC < 41bp 0.415319737543478 0.813861614274826 0.0815649 0.5531588 prediction 0.627723228549653 Functional Gain - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415811 chr4:110415815 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_101057 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr4:110415770-110415815
64251 chr3 131101009 131101009 1 + C A SARC 131101005 + 131100985 131101025 41 CGAGGAGCTGGGCGAAGCGGCTGCCGCTTTCCGCGTGGAGC CGAGGAGCTGGGCGAAGCGGCTGCAGCTTTCCGCGTGGAGC < 41bp 0.441713943392826 0.813841066340003 0.270621 0.2761253 prediction 0.627682132680007 Functional Gain - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131101005 chr3:131101009 synonymous SNV . 0 25 hm5C_associated_SNPs_101058 0 0 6 DDX3X POSTAR2 ENCODE chr3:131101000-131101068
64251 chr20 43536065 43536065 1 + C A rs115177153 43536061 + 43536041 43536081 41 ACCTGTGAATAACTGCACTCCAGCCTGGGCAACATAGCGAG ACCTGTGAATAACTGCACTCCAGCATGGGCAACATAGCGAG < 41bp 0.564168987620921 0.877981226373372 0.09531477 0.09004316 prediction 0.627624477504901 Functional Gain - YWHAB ENSG00000166913 UTR3 Human protein_coding chr20:43536061 chr20:43536065 . . 0 25 hm5C_associated_SNPs_101060 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:43536029-43536086
64251 chrX 48458893 48458893 1 + T G UCEC 48458890 + 48458870 48458910 41 TGACATCCTCGTGTCCACCTCACTGGATGCCACCATGCGCA TGACATCCTCGTGTCCACCTCACGGGATGCCACCATGCGCA < 41bp 0.425906693385603 0.813585414403656 0.1939823 0.39257413 prediction 0.627170828807313 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48458890 chrX:48458893 nonsynonymous SNV 0.979 4 24 hm5C_associated_SNPs_101069 0 0 2 SRSF1 POSTAR2 ENCODE chrX:48458891-48459038
64251 chr17 33321390 33321390 1 + T G HNSC 33321388 + 33321368 33321408 41 ATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCACTTC ATGGAGAGCGAGTCCAGGTGCAGAAGAATGGAGACCACTTC < 41bp 0.492040205188945 0.813465181271307 0.13818112 0.35581037 prediction 0.626930362542614 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33321388 chr17:33321390 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_101071 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33321365-33321390
64251 chr6 89790649 89790649 1 + C A rs144161245 89790645 + 89790625 89790665 41 CTCCGTCCCGCAGCGGGAGCCGCTCGTCCTGGGTGGCCGCC CTCCGTCCCGCAGCGGGAGCCGCTAGTCCTGGGTGGCCGCC < 41bp 0.452723907488764 0.813418192688075 0.23805901 0.5024604 prediction 0.626836385376151 Functional Gain - PNRC1 ENSG00000146278 CDS Human protein_coding chr6:89790645 chr6:89790649 synonymous SNV . 0 25 hm5C_associated_SNPs_101073 0 0 3 DDX6 POSTAR2 ENCODE chr6:89790558-89790660
64251 chr2 70315393 70315393 1 + C A GBM 70315389 + 70315369 70315409 41 TCATGCTGGAGACGCTCTCCCAGTCTCCGCAAGGGAGAGTC TCATGCTGGAGACGCTCTCCCAGTATCCGCAAGGGAGAGTC < 41bp 0.560211893559441 0.87357587264164 0.17766243 0.18903524 prediction 0.626727958164398 Functional Gain - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315389 chr2:70315393 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_101078 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:70315360-70315398
64251 chr2 241531477 241531477 1 + C A rs3792268 241531473 + 241531453 241531493 41 GGAAGCGGAGGCCAGCAGGACAGGCCAGGCCGCTGGGAGCA GGAAGCGGAGGCCAGCAGGACAGGACAGGCCGCTGGGAGCA < 41bp 0.568750029844698 0.882108731225434 0.82984775 0.8557401 prediction 0.626717402761473 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241531473 chr2:241531477 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_101079 0 0 1 PPIG POSTAR2 ENCODE chr2:241531442-241531485
64251 chr13 24233255 24233255 1 + C A GBM 24233251 + 24233231 24233271 41 CCAGCCCACGGGACACGGCGCTGGCTGCCGTTATCTGCAGC CCAGCCCACGGGACACGGCGCTGGATGCCGTTATCTGCAGC < 41bp 0.579951551716136 0.893298020102965 0.3194166 0.41310093 prediction 0.626692936773658 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24233251 chr13:24233255 nonsynonymous SNV 0.053 4 25 hm5C_associated_SNPs_101080 0 0 2 SND1 POSTAR2 ENCODE chr13:24233205-24233262
64251 chr22 35691106 35691106 1 + C A rs16995562 35691102 + 35691082 35691122 41 ATGAGATTCTCTGCCAACACCAAGCTCTGAGTTAACTGTGC ATGAGATTCTCTGCCAACACCAAGATCTGAGTTAACTGTGC < 41bp 0.527368197560335 0.840600597305241 0.23687392 0.40669695 prediction 0.626464799489812 Functional Gain - HMGXB4 ENSG00000100281 UTR3 Human protein_coding chr22:35691102 chr22:35691106 . . 0 25 hm5C_associated_SNPs_101086 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:35691022-35691114
64251 chr11 118405257 118405257 1 + C A rs143259331 118405253 + 118405233 118405273 41 CTCCCAGTGCTGGGCTATATCTATCGAGTGTCCAGCGTGAG CTCCCAGTGCTGGGCTATATCTATAGAGTGTCCAGCGTGAG < 41bp 0.440341238528448 0.813217257055177 0.067076 0.101563394 prediction 0.626434514110353 Functional Gain - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118405253 chr11:118405257 synonymous SNV . 0 25 hm5C_associated_SNPs_101088 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118405238-118405269
64251 chr20 56139608 56139608 1 + C A UCEC 56139604 + 56139584 56139624 41 CCAGTGCCCCATCATTGATGCTGCCTGGGAGTCTCCGGAAG CCAGTGCCCCATCATTGATGCTGCATGGGAGTCTCCGGAAG < 41bp 0.400281451524194 0.813033915143581 0.07846138 0.28966454 prediction 0.626067830287163 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139604 chr20:56139608 synonymous SNV . 0 25 hm5C_associated_SNPs_101098 0 0 1 PPIG POSTAR2 ENCODE chr20:56139595-56139677
64251 chr12 113796589 113796589 1 + C A rs183718103 113796585 + 113796565 113796605 41 CAGGTCCCTCCAGCCTCCCGCAGCCGCTCGGTGCTCCTGGA CAGGTCCCTCCAGCCTCCCGCAGCAGCTCGGTGCTCCTGGA < 41bp 0.550580217902681 0.863543400524608 0.34498402 0.44188362 prediction 0.625926365243854 Functional Gain - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113796585 chr12:113796589 nonsynonymous SNV 0.222 0 25 hm5C_associated_SNPs_101106 0 0 6 DDX3X POSTAR2 ENCODE chr12:113796493-113796626
64251 chr15 63579688 63579688 1 + T A LAML 63579684 + 63579664 63579704 41 TTTGTGAATACCCTATCTGACTCCTTGGGGCCAGGCACAGT TTTGTGAATACCCTATCTGACTCCATGGGGCCAGGCACAGT < 41bp 0.483716599227805 0.812962044213644 0.20748156 0.9612688 prediction 0.625924088427289 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63579684 chr15:63579688 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_101107 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:63579687-63579688
64251 chr1 214171246 214171246 1 + C A HNSC 214171242 + 214171222 214171262 41 TGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACC TGACCAGTCTGCCTCCGGCCCTGCAGCTGGCGGCCACCACC < 41bp 0.426283588836736 0.812818550063064 0.17156437 0.25049782 prediction 0.625637100126128 Functional Gain - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171242 chr1:214171246 synonymous SNV . 0 25 hm5C_associated_SNPs_101117 0 0 1 PCBP2 POSTAR2 ENCODE chr1:214171234-214171373
64251 chr19 33696442 33696442 1 + C A LAML 33696438 + 33696418 33696458 41 GGCTGCCCCGACCTGGCGTGCGGCCGGCGGCTGGGCAGCTT GGCTGCCCCGACCTGGCGTGCGGCAGGCGGCTGGGCAGCTT < 41bp 0.566429947155779 0.879247242122977 0.9151062 0.9192369 prediction 0.625634589934395 Functional Gain - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696438 chr19:33696442 synonymous SNV . 0 25 hm5C_associated_SNPs_101118 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:33696439-33696460
64251 chr12 56113380 56113380 1 + C A PAAD 56113376 + 56113356 56113396 41 ATGTCTACAAAGGGCAGCTGCAGTCTGCCCCTTCCTAGCCC ATGTCTACAAAGGGCAGCTGCAGTATGCCCCTTCCTAGCCC < 41bp 0.431260897553887 0.812779432904297 0.03358239 0.057264566 prediction 0.625558865808593 Functional Gain - BLOC1S1 ENSG00000135441 CDS Human protein_coding chr12:56113376 chr12:56113380 nonsynonymous SNV 0.845 3 25 hm5C_associated_SNPs_101119 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:56113375-56113410
64251 chr18 63477076 63477076 1 + C A UCEC 63477072 + 63477052 63477092 41 AGAGACTGGATCGTGAGGAGCAGGCCTACTACACGCTCCGA AGAGACTGGATCGTGAGGAGCAGGACTACTACACGCTCCGA < 41bp 0.572988334544734 0.885758374608893 0.7198441 0.87071973 prediction 0.625540080128318 Functional Gain - CDH7 ENSG00000081138 CDS Human protein_coding chr18:63477072 chr18:63477076 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_101121 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr18:63477072-63477099
64251 chr3 38180165 38180165 1 + C A HNSC 38180161 + 38180141 38180181 41 CGCTGGCAGACAATGCGACCCGACCGCGCTGAGGCTCCAGG CGCTGGCAGACAATGCGACCCGACAGCGCTGAGGCTCCAGG < 41bp 0.446195884232161 0.812714315837613 0.078855366 0.11066562 prediction 0.625428631675226 Functional Gain - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180161 chr3:38180165 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_101125 0 0 1 DDX3X POSTAR2 ENCODE chr3:38180159-38180242
64251 chr4 59362 59362 1 + C A UCEC 59358 + 59338 59378 41 AGGGATGTGGCCATAGAATTCTCCCCTGAAGAGTGGAAATG AGGGATGTGGCCATAGAATTCTCCACTGAAGAGTGGAAATG < 41bp 0.412273038807661 0.812583640898823 0.10662413 0.9365641 prediction 0.625167281797645 Functional Gain - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:59358 chr4:59362 nonsynonymous SNV 0.076 1 25 hm5C_associated_SNPs_101129 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:59360-59395
64251 chr17 22022759 22022759 1 + C A rs56270535 22022755 + 22022735 22022775 41 GGTAGAGGTGACAAGCCTACCGAGCCTGGTGATAGCTGGTT GGTAGAGGTGACAAGCCTACCGAGACTGGTGATAGCTGGTT < 41bp 0.532085880689405 0.844572517538162 0.08702648 0.29845834 prediction 0.624973273697513 Functional Gain - MTRNR2L1 ENSG00000256618 UTR5 Human protein_coding chr17:22022755 chr17:22022759 . . 0 25 hm5C_associated_SNPs_101136 0 0 13 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:22022740-22022760
64251 chr7 135282874 135282874 1 + C A LUSC 135282870 + 135282850 135282890 41 GGGTGCTGGACTGCGGCCCCCTGGCTTTGACCCTTATTTGC GGGTGCTGGACTGCGGCCCCCTGGATTTGACCCTTATTTGC < 41bp 0.419973574545393 0.812339372501362 0.039848685 0.23076963 prediction 0.624678745002725 Functional Gain - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135282870 chr7:135282874 synonymous SNV . 0 25 hm5C_associated_SNPs_101145 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:135282755-135282884
64251 chr19 36279068 36279068 1 + C A BLCA 36279064 + 36279044 36279084 41 CCCCGAAGCCGTTCAGATCCCGGTCCCCCAGTCCCCCGCCT CCCCGAAGCCGTTCAGATCCCGGTACCCCAGTCCCCCGCCT < 41bp 0.439639469826151 0.812335365785314 0.47343388 0.6390837 prediction 0.624670731570627 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279064 chr19:36279068 nonsynonymous SNV 0.101 2 25 hm5C_associated_SNPs_101146 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:36279066-36279091
64251 chr12 7045939 7045939 1 + T G THCA 7045937 + 7045917 7045957 41 AGCAGCAGCAGCAGCAGCAGCATCACGGAAACTCTGGGCCC AGCAGCAGCAGCAGCAGCAGCAGCACGGAAACTCTGGGCCC < 41bp 0.511406125691531 0.823710900807226 0.2997219 0.6230662 prediction 0.62460955023139 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045937 chr12:7045939 nonsynonymous SNV 0.068 0 23 hm5C_associated_SNPs_101148 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:7045920-7045940
64251 chrX 48650384 48650384 1 + C A UCEC 48650380 + 48650360 48650400 41 TCCCACCCGCGAGGACTCTCCTCCCCAGGCCGTGGAAGATC TCCCACCCGCGAGGACTCTCCTCCACAGGCCGTGGAAGATC < 41bp 0.384325960903747 0.812299133203434 0.73709655 0.96766883 prediction 0.624598266406867 Functional Gain - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48650380 chrX:48650384 synonymous SNV . 0 25 hm5C_associated_SNPs_101149 0 0 3 IGF2BP1 POSTAR2 ENCODE chrX:48650381-48650408
64251 chr19 17615394 17615394 1 + C A LUAD 17615390 + 17615370 17615410 41 CTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGGCGCCT CTTAAATGAGGCAGTCTACACTCGAATCTGCTCGGGCGCCT < 41bp 0.57404703774812 0.886342249231201 0.40734762 0.87176746 prediction 0.624590422966162 Functional Gain - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17615390 chr19:17615394 synonymous SNV . 0 25 hm5C_associated_SNPs_101150 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17615383-17615424
64251 chr14 70346406 70346406 1 + C A UCS 70346402 + 70346382 70346422 41 GCCTGGCTGGCACCATGCTGCCCGCGCGCTGCGCCCGCCTG GCCTGGCTGGCACCATGCTGCCCGAGCGCTGCGCCCGCCTG < 41bp 0.554021928443804 0.866187457386756 0.31911606 0.4697821 prediction 0.624331057885905 Functional Gain - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70346402 chr14:70346406 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101157 0 0 3 DDX3X POSTAR2 ENCODE chr14:70346339-70346436
64251 chr15 29398883 29398883 1 + C A COAD 29398879 + 29398859 29398899 41 AGTCGGGCTGGGGCTCCATCCTGCCCACGGTGATCCTGGCC AGTCGGGCTGGGGCTCCATCCTGCACACGGTGATCCTGGCC < 41bp 0.584728519186594 0.896828076513806 0.28420073 0.32020783 prediction 0.624199114654425 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29398879 chr15:29398883 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_101161 0 0 1 ZNF622 POSTAR2 ENCODE chr15:29398808-29398904
64251 chr16 86601394 86601394 1 + C A LUSC 86601390 + 86601370 86601410 41 CAGTTACTGGACCCTGGACCCGGACTCCTACAACATGTTCG CAGTTACTGGACCCTGGACCCGGAATCCTACAACATGTTCG < 41bp 0.462045960096671 0.812090260081388 0.24289188 0.6819721 prediction 0.624180520162776 Functional Gain - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86601390 chr16:86601394 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101162 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:86601362-86601405
64251 chr20 44747004 44747004 1 + T G rs113207193 44747001 + 44746981 44747021 41 CTATGGTTCGTCTGCCTCTGCAGTGCGTCCTCTGGGGCTGC CTATGGTTCGTCTGCCTCTGCAGGGCGTCCTCTGGGGCTGC < 41bp 0.432733118801006 0.812072674160292 0.16610819 0.86494815 prediction 0.624145348320583 Functional Gain - CD40 ENSG00000101017 CDS Human protein_coding chr20:44747001 chr20:44747004 nonsynonymous SNV 0.007 3 24 hm5C_associated_SNPs_101163 0 0 1 DDX3X POSTAR2 ENCODE chr20:44746983-44747032
64251 chr20 55206728 55206728 1 + C A GBM 55206724 + 55206704 55206744 41 CCTGGGGCTCCACGACATGCCTCACCAGATGGACGAGGTGC CCTGGGGCTCCACGACATGCCTCAACAGATGGACGAGGTGC < 41bp 0.406548068529289 0.811995011769852 0.12038997 0.1771752 prediction 0.623990023539703 Functional Gain - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55206724 chr20:55206728 nonsynonymous SNV 0.926 0 25 hm5C_associated_SNPs_101167 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:55206701-55206731
64251 chr13 115004884 115004884 1 + T G KIRC 115004881 + 115004861 115004901 41 CTTGACATGGAAGAGCCCATCAATAAAAGATTATTTGAAAA CTTGACATGGAAGAGCCCATCAAGAAAAGATTATTTGAAAA < 41bp 0.545497042269111 0.857446472071037 0.06338233 0.25631747 prediction 0.623898859603851 Functional Gain - CDC16 ENSG00000130177 CDS Human protein_coding chr13:115004881 chr13:115004884 nonsynonymous SNV 0.979 2 24 hm5C_associated_SNPs_101169 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:115004863-115004884
64251 chr19 48248839 48248839 1 + T G COAD 48248837 + 48248817 48248857 41 ATGGCGGCAGGAGGCAGTGGCGTTGGTGGGAAGCGCAGCTC ATGGCGGCAGGAGGCAGTGGCGGTGGTGGGAAGCGCAGCTC < 41bp 0.48705023313357 0.811928953568465 0.8237397 0.8868829 prediction 0.62385790713693 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48248837 chr19:48248839 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_101170 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:48248820-48248840
64251 chr13 49762718 49762718 1 + C A UCEC 49762714 + 49762694 49762734 41 TCTTTGTGATCGACTGAATCCAGGCTGTTTCTATCGTTTAC TCTTTGTGATCGACTGAATCCAGGATGTTTCTATCGTTTAC < 41bp 0.435263017121471 0.811920862487938 0.44597858 0.46357027 prediction 0.623841724975876 Functional Gain - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49762714 chr13:49762718 synonymous SNV . 0 25 hm5C_associated_SNPs_101174 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:49762684-49762754
64251 chr10 126672147 126672147 1 + C A OV 126672143 + 126672123 126672163 41 ATGGAAAATGATGGCTATGGCAACCGAGGTGCTGGTGCTAA ATGGAAAATGATGGCTATGGCAACAGAGGTGCTGGTGCTAA < 41bp 0.425663365826126 0.811836520993935 0.22014636 0.308311 prediction 0.62367304198787 Functional Gain - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126672143 chr10:126672147 synonymous SNV . 0 25 hm5C_associated_SNPs_101181 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:126672097-126672174
64251 chr11 46727164 46727164 1 + C A STAD 46727160 + 46727140 46727180 41 GCCTGAGGCACCCTGCAGCCCACCCTCTGTGCCTTCTGCTG GCCTGAGGCACCCTGCAGCCCACCATCTGTGCCTTCTGCTG < 41bp 0.427692357007831 0.811804493574082 0.022982866 0.08479568 prediction 0.623608987148163 Functional Gain - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46727160 chr11:46727164 synonymous SNV . 0 25 hm5C_associated_SNPs_101183 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:46727160-46727190
64251 chr19 36149504 36149504 1 + C A UCEC 36149500 + 36149480 36149520 41 CACTGTCTTTCCACAGGTCACAGACTGGGATGAGCAACGGG CACTGTCTTTCCACAGGTCACAGAATGGGATGAGCAACGGG < 41bp 0.441419541723487 0.811707273386568 0.05318767 0.16186196 prediction 0.623414546773135 Functional Gain - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36149500 chr19:36149504 nonsynonymous SNV 0.454 1 25 hm5C_associated_SNPs_101192 0 0 32 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36149491-36149515
64251 chrX 55033113 55033113 1 + C A UCEC 55033109 + 55033089 55033129 41 TGCTGGTCAGCAGTCACTGGCGCCCGCCATCTCAACTATGG TGCTGGTCAGCAGTCACTGGCGCCAGCCATCTCAACTATGG < 41bp 0.419360083651054 0.811552753388063 0.2908174 0.48601982 prediction 0.623105506776127 Functional Gain - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55033109 chrX:55033113 nonsynonymous SNV 0.957 4 25 hm5C_associated_SNPs_101196 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:55033096-55033134
64251 chr16 2035892 2035892 1 + C A SKCM 2035888 + 2035868 2035908 41 CTGTGCAGGAACCACCCAGACACCCGCACCCGGGCATGCTT CTGTGCAGGAACCACCCAGACACCAGCACCCGGGCATGCTT < 41bp 0.415589624408144 0.811513641683115 0.07866436 0.04891172 prediction 0.62302728336623 Functional Gain - GFER ENSG00000127554 CDS Human protein_coding chr16:2035888 chr16:2035892 nonsynonymous SNV 0.622 0 25 hm5C_associated_SNPs_101199 0 0 1 LSM11 POSTAR2 ENCODE chr16:2035804-2035900
64251 chrX 100668219 100668219 1 + C A BRCA 100668215 + 100668195 100668235 41 AGTTATGGAGGTCCTGCTAGCCAGCAGCTGAGTGGTGGTTA AGTTATGGAGGTCCTGCTAGCCAGAAGCTGAGTGGTGGTTA < 41bp 0.548424420783376 0.859885473185479 0.41684 0.78514504 prediction 0.622922104804206 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100668215 chrX:100668219 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101200 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chrX:100668189-100668241
64251 chr2 30863117 30863117 1 + C A UCEC 30863113 + 30863093 30863133 41 GTCCACCGGTATCCAATAGACACCCTCCCCACATCCAAGGA GTCCACCGGTATCCAATAGACACCATCCCCACATCCAAGGA < 41bp 0.416152863826833 0.811302873368486 0.0017462969 0.00266549 prediction 0.622605746736972 Functional Gain - LCLAT1 ENSG00000172954 CDS Human protein_coding chr2:30863113 chr2:30863117 nonsynonymous SNV 0.052 1 25 hm5C_associated_SNPs_101206 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:30863078-30863143
64251 chr19 41825583 41825583 1 + C A STAD 41825579 + 41825559 41825599 41 CAGGAGGAGCTCAGTGCCCGCACCCCAACCCACCAGCCCCC CAGGAGGAGCTCAGTGCCCGCACCACAACCCACCAGCCCCC < 41bp 0.413399230499159 0.811244091761281 0.28108555 0.21560806 prediction 0.622488183522562 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41825579 chr19:41825583 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_101214 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41825567-41825594
64251 chr17 61895287 61895287 1 + C A STAD 61895283 + 61895263 61895303 41 TGCCCCTGTGACCTACCCGTCTGCCGGAGCCCAAGGAGTCA TGCCCCTGTGACCTACCCGTCTGCAGGAGCCCAAGGAGTCA < 41bp 0.412636459469382 0.81119986700792 0.16813362 0.17798868 prediction 0.62239973401584 Functional Gain - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61895283 chr17:61895287 synonymous SNV . 0 25 hm5C_associated_SNPs_101218 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:61895272-61895293
64251 chr10 135273198 135273198 1 + T G rs146322660 135273195 + 135273175 135273215 41 CCGCGGATCCGTCCAGGTGGCGCTGAGCCGCGTGCGCTGTC CCGCGGATCCGTCCAGGTGGCGCGGAGCCGCGTGCGCTGTC < 41bp 0.565027865480545 0.876211474030052 0.5183475 0.86730254 prediction 0.622367217099014 Functional Gain - SCART1 ENSG00000214279 ncRNA_exonic Human protein_coding chr10:135273195 chr10:135273198 . . 0 24 hm5C_associated_SNPs_101220 0 0 1 PPIG POSTAR2 ENCODE chr10:135273148-135273219
64251 chr11 22248924 22248924 1 + T G SKCM 22248922 + 22248902 22248942 41 TTAGTTACCTATGCTGAAGTCTTGGGAATCAAAATGCCTAT TTAGTTACCTATGCTGAAGTCTGGGGAATCAAAATGCCTAT < 41bp 0.512976153575518 0.824103669550293 0.170567 0.55598223 prediction 0.622255031949549 Functional Gain - ANO5 ENSG00000171714 CDS Human protein_coding chr11:22248922 chr11:22248924 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_101225 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:22248920-22248940
64251 chr5 73048945 73048945 1 + C A COAD 73048941 + 73048921 73048961 41 CTTGACGGCAGGAGCACTGCCTGCCTTGGATGAGGAGCTCG CTTGACGGCAGGAGCACTGCCTGCATTGGATGAGGAGCTCG < 41bp 0.419944799639917 0.811070056655304 0.010435641 0.13677678 prediction 0.622140113310608 Functional Gain - ARHGEF28 ENSG00000214944 CDS Human protein_coding chr5:73048941 chr5:73048945 synonymous SNV . 0 25 hm5C_associated_SNPs_101229 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:73048944-73048945
64251 chr17 21731555 21731555 1 + C A ESCA 21731551 + 21731531 21731571 41 GGAAGATGGCCGCACTCTTTCTGACTACAGCATCCAGAAAG GGAAGATGGCCGCACTCTTTCTGAATACAGCATCCAGAAAG < 41bp 0.558569489306444 0.869627122183665 0.21264288 0.28085935 prediction 0.622115265754444 Functional Gain - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731551 chr17:21731555 nonsynonymous SNV 0.305 0 25 hm5C_associated_SNPs_101231 0 0 6 LIN28B POSTAR2 ENCODE chr17:21731509-21731578
64251 chr19 41700485 41700485 1 + C A UCEC 41700481 + 41700461 41700501 41 TACGGACCGGTGTTCACCATCTACCTGGGACCGTGGCGGCC TACGGACCGGTGTTCACCATCTACATGGGACCGTGGCGGCC < 41bp 0.39693145732982 0.811017858576262 0.28044057 0.9215282 prediction 0.622035717152524 Functional Gain - CYP2S1 ENSG00000167600 CDS Human protein_coding chr19:41700481 chr19:41700485 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101233 0 0 1 SND1 POSTAR2 ENCODE chr19:41700481-41700568
64251 chr1 41482959 41482959 1 + C A UCEC 41482955 + 41482935 41482975 41 CAGACAGCGGGCCCTGGATGCTCCCGTCGCGCCGCAGAAAC CAGACAGCGGGCCCTGGATGCTCCAGTCGCGCCGCAGAAAC < 41bp 0.578676222390421 0.889590263592537 0.14596438 0.89913934 prediction 0.621828082404231 Functional Gain - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41482955 chr1:41482959 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_101240 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41482931-41482962
64251 chr3 9952559 9952559 1 + C A rs115354176 9952555 + 9952535 9952575 41 TGCCACCTGCCCAGATGGCTCGGACTTCTGGAAGTCAGTGC TGCCACCTGCCCAGATGGCTCGGAATTCTGGAAGTCAGTGC < 41bp 0.448477528338544 0.810907640373076 0.28948057 0.38230947 prediction 0.621815280746152 Functional Gain - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9952555 chr3:9952559 nonsynonymous SNV 0.988 1 25 hm5C_associated_SNPs_101241 0 0 4 BUD13 POSTAR2 ENCODE chr3:9952518-9952591
64251 chr12 56110759 56110759 1 + C A UCEC 56110755 + 56110735 56110775 41 CTATCACTGCAGCGACCTGCCTGACAGAAGCTTTGGTGGAT CTATCACTGCAGCGACCTGCCTGAAAGAAGCTTTGGTGGAT < 41bp 0.406964520656129 0.810752062216339 0.1622796 0.3106805 prediction 0.621504124432679 Functional Gain - BLOC1S1 ENSG00000135441;ENSG00000258311 CDS Human other chr12:56110755 chr12:56110759 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_101248 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr12:56110719-56110761
64251 chr17 30687944 30687944 1 + T G SKCM 30687941 + 30687921 30687961 41 ATTAATGCCAGGTGTTCCTCCTCTGATGCCAGGAATGCCAC ATTAATGCCAGGTGTTCCTCCTCGGATGCCAGGAATGCCAC < 41bp 0.556533882670439 0.867250517207044 0.0927622 0.23171723 prediction 0.621433269073209 Functional Gain - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687941 chr17:30687944 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_101249 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30687876-30687944
64251 chr2 121746766 121746766 1 + C A COAD 121746762 + 121746742 121746782 41 GGTGTATCCCACGGAAAGCACTGGCTTCTCTGACAACCCCA GGTGTATCCCACGGAAAGCACTGGATTCTCTGACAACCCCA < 41bp 0.557469262375419 0.868113623380871 0.4151376 0.4051413 prediction 0.621288722010904 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121746762 chr2:121746766 synonymous SNV . 0 25 hm5C_associated_SNPs_101250 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:121746765-121746795
64251 chr6 26459970 26459970 1 + T G UCEC 26459968 + 26459948 26459988 41 GTGGCCCTGGTCATACACAACATCACAGCCCAGGAAAACGG GTGGCCCTGGTCATACACAACAGCACAGCCCAGGAAAACGG < 41bp 0.517333615201692 0.827971193982825 0.07637861 0.23914647 prediction 0.621275157562267 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459968 chr6:26459970 nonsynonymous SNV 0.087 1 23 hm5C_associated_SNPs_101251 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26459948-26459975
64251 chr19 863170 863170 1 + C A rs564333282 863166 + 863146 863186 41 TCGGGCTCGCGCGTTTGCGGCAACCGCAAGAAGCCCGGGAT TCGGGCTCGCGCGTTTGCGGCAACAGCAAGAAGCCCGGGAT < 41bp 0.551926565238084 0.862544511681165 0.6358037 0.5695984 prediction 0.621235892886162 Functional Gain - CFD ENSG00000197766 CDS Human protein_coding chr19:863166 chr19:863170 nonsynonymous SNV 0.480 1 25 hm5C_associated_SNPs_101252 0 0 5 CSTF2T POSTAR2 ENCODE chr19:863114-863171
64251 chr22 40365518 40365518 1 + T G LUSC 40365515 + 40365495 40365535 41 GCATCGGAGACACACAGACCCAGTGCAGCTCCAGGCGGCAG GCATCGGAGACACACAGACCCAGGGCAGCTCCAGGCGGCAG < 41bp 0.57143072143286 0.881835096786689 0.7979653 0.90946203 prediction 0.620808750707659 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40365515 chr22:40365518 nonsynonymous SNV 0.967 0 24 hm5C_associated_SNPs_101264 0 0 1 ZNF622 POSTAR2 ENCODE chr22:40365482-40365539
64251 chr13 21714807 21714807 1 + T G KIRC 21714804 + 21714784 21714824 41 TAAGAAGGAGCCAGAGAAACCGATCGACCGCGAGAAGGTGA TAAGAAGGAGCCAGAGAAACCGAGCGACCGCGAGAAGGTGA < 41bp 0.550497339706397 0.860703726829086 0.5789857 0.8738282 prediction 0.620412774245377 Functional Gain - SAP18 ENSG00000150459 CDS Human protein_coding chr13:21714804 chr13:21714807 nonsynonymous SNV 0.162 2 24 hm5C_associated_SNPs_101276 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:21714745-21714815
64251 chr11 119252601 119252601 1 + C A rs112950413 119252597 + 119252577 119252617 41 ACAGAGGTGGACTGGAATGTCACACGACGGGGCAGCTGGAA ACAGAGGTGGACTGGAATGTCACAAGACGGGGCAGCTGGAA < 41bp 0.459411622753279 0.8101996499962 0.1384474 0.20220199 prediction 0.620399299992399 Functional Gain - USP2-AS1 ENSG00000245248 ncRNA_exonic Human antisense chr11:119252597 chr11:119252601 . . 0 25 hm5C_associated_SNPs_101277 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr11:119252579-119252603
64251 chr22 50961497 50961497 1 + C A LIHC 50961493 + 50961473 50961513 41 ACCTATGGGGACCAGCTGGTCTCACGGTTCCCCCAGCTCAA ACCTATGGGGACCAGCTGGTCTCAAGGTTCCCCCAGCTCAA < 41bp 0.405561634586554 0.810150654907493 0.11159253 0.054417133 prediction 0.620301309814985 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50961493 chr22:50961497 synonymous SNV . 0 25 hm5C_associated_SNPs_101279 0 0 6 LIN28B POSTAR2 GSE44616,GSM1087851 chr22:50961464-50961498
64251 chr9 139977209 139977209 1 + C A rs7851653 139977205 + 139977185 139977225 41 GCCCAGACTGTCCCCAGACTCCCCCGAGACCTGCCAGCCCC GCCCAGACTGTCCCCAGACTCCCCAGAGACCTGCCAGCCCC < 41bp 0.440486780138933 0.810097998544306 0.07630834 0.16495663 prediction 0.620195997088613 Functional Gain - UAP1L1 ENSG00000197355 UTR3 Human protein_coding chr9:139977205 chr9:139977209 . . 0 25 hm5C_associated_SNPs_101281 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139977180-139977225
64251 chr21 38095410 38095410 1 + C A LIHC 38095406 + 38095386 38095426 41 TGTCTTGGCGAAAAGGAACGCGGGCCTGACCTGCAGCGGAT TGTCTTGGCGAAAAGGAACGCGGGACTGACCTGCAGCGGAT < 41bp 0.578326635581048 0.888264723856055 0.8933023 0.8992684 prediction 0.619876176550014 Functional Gain - SIM2 ENSG00000159263 CDS Human protein_coding chr21:38095406 chr21:38095410 synonymous SNV . 0 25 hm5C_associated_SNPs_101289 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr21:38095401-38095424
64251 chr12 67706402 67706402 1 + T G ESCA 67706399 + 67706379 67706419 41 CTTACAGGTAAAGGCAAACTCAGTAAAGCAGGAGTTTGAAA CTTACAGGTAAAGGCAAACTCAGGAAAGCAGGAGTTTGAAA < 41bp 0.467624868087087 0.809930431048675 0.14409387 0.883469 prediction 0.619860862097351 Functional Gain - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67706399 chr12:67706402 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_101290 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:67706388-67706424
64251 chr1 155838163 155838163 1 + T A LUSC 155838159 + 155838139 155838179 41 ACCCCTGGGGAGAGCAAAACCACCTCTCCATCATCTCCAGA ACCCCTGGGGAGAGCAAAACCACCACTCCATCATCTCCAGA < 41bp 0.506510508390133 0.816435154676604 0.033412725 0.1621013 prediction 0.619849292572942 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155838159 chr1:155838163 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101291 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr1:155838152-155838177
64251 chr7 155251506 155251506 1 + C A rs552755714 155251502 + 155251482 155251522 41 CCGGCGCGGGCGGGCCGCTCCCAGCCGCCGGCAGCGACTCT CCGGCGCGGGCGGGCCGCTCCCAGACGCCGGCAGCGACTCT < 41bp 0.56082178631773 0.870731575052381 0.4117315 0.72728634 prediction 0.6198195774693 Functional Gain - EN2 ENSG00000164778 CDS Human protein_coding chr7:155251502 chr7:155251506 nonsynonymous SNV 0.043 1 25 hm5C_associated_SNPs_101294 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:155251498-155251523
64251 chr11 64875906 64875906 1 + C A KIRC 64875902 + 64875882 64875922 41 CGGCCTCTGCCAGGTGGCGGCGGCCTACCAGGAGCTGTTTG CGGCCTCTGCCAGGTGGCGGCGGCATACCAGGAGCTGTTTG < 41bp 0.566140263338982 0.876013736988051 0.83371794 0.89859223 prediction 0.619746947298138 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64875902 chr11:64875906 synonymous SNV . 0 25 hm5C_associated_SNPs_101295 0 0 4 EFTUD2 POSTAR2 ENCODE chr11:64875891-64875922
64251 chr6 348192 348192 1 + T G COAD 348190 + 348170 348210 41 TGGGAGGATGCCCTGCACACCGTGCGTGCTGGGAGATCCTG TGGGAGGATGCCCTGCACACCGGGCGTGCTGGGAGATCCTG < 41bp 0.5247916460045 0.834650980206648 0.07505882 0.6969099 prediction 0.619718668404297 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348190 chr6:348192 nonsynonymous SNV 0.806 5 23 hm5C_associated_SNPs_101296 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:348191-348192
64251 chr11 2411684 2411684 1 + C A BLCA 2411680 + 2411660 2411700 41 CTGGGTGTGGCCCTGTGGCTCCGCCATGACCCGCAGACCAC CTGGGTGTGGCCCTGTGGCTCCGCAATGACCCGCAGACCAC < 41bp 0.419024329079365 0.809842146740937 0.2672401 0.12030923 prediction 0.619684293481874 Functional Gain - CD81 ENSG00000110651 CDS Human protein_coding chr11:2411680 chr11:2411684 nonsynonymous SNV 0.960 2 25 hm5C_associated_SNPs_101299 0 0 12 TARDBP POSTAR2 DRA001158,DRS012385 chr11:2411654-2411684
64251 chr19 15769359 15769359 1 + C A rs61734306 15769355 + 15769335 15769375 41 TCACAACCCAGCCGTGTGGCCGGACCCTGAGGTGCGGGCCC TCACAACCCAGCCGTGTGGCCGGAACCTGAGGTGCGGGCCC < 41bp 0.420928899211034 0.809802628999279 0.42863497 0.88744223 prediction 0.619605257998559 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15769355 chr19:15769359 nonsynonymous SNV 0.735 2 25 hm5C_associated_SNPs_101304 0 0 2 PPIG POSTAR2 ENCODE chr19:15769323-15769367
64251 chr12 122497869 122497869 1 + T G rs76338977 122497867 + 122497847 122497887 41 CCAGATGGACGTGCAAAGCCCTTGGAATTTTCTGGCACTTC CCAGATGGACGTGCAAAGCCCTGGGAATTTTCTGGCACTTC < 41bp 0.497852619353931 0.809787881454851 0.15889928 0.39791864 prediction 0.619575762909703 Functional Gain - BCL7A ENSG00000110987 UTR3 Human protein_coding chr12:122497867 chr12:122497869 . . 0 23 hm5C_associated_SNPs_101305 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:122497820-122497880
64251 chr17 42225451 42225451 1 + T G rs202187285 42225449 + 42225429 42225469 41 GCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCTC GCCCAGTGCTGACAGCCGTCCAGCATGCATAGGAGCAGCTC < 41bp 0.500805158494541 0.810587527412333 0.15038121 0.2542926 prediction 0.619564737835584 Functional Gain - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225449 chr17:42225451 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_101306 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:42225440-42225460
64251 chr22 20194318 20194318 1 + C A UCEC 20194314 + 20194294 20194334 41 GAAGGGTGGGGTGCAGGGGCCTCCCTGGCTGCAGGGCCCAC GAAGGGTGGGGTGCAGGGGCCTCCATGGCTGCAGGGCCCAC < 41bp 0.562518383225409 0.87222987924438 0.62422085 0.9510387 prediction 0.619422992037942 Functional Gain - LINC00896 ENSG00000236499 ncRNA_exonic Human lincRNA chr22:20194314 chr22:20194318 . . 0 25 hm5C_associated_SNPs_101310 0 0 2 EWSR1 POSTAR2 ENCODE chr22:20194304-20194367
64251 chr16 67650732 67650732 1 + C A BLCA 67650728 + 67650708 67650748 41 TTCGGCATCGTCGTTACAAACACACCCACGAGAAGCCATTC TTCGGCATCGTCGTTACAAACACAACCACGAGAAGCCATTC < 41bp 0.397678069035049 0.809704191454639 0.048973203 0.056459397 prediction 0.619408382909278 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67650728 chr16:67650732 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_101311 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:67650669-67650746
64251 chr17 73512884 73512884 1 + T G rs8079373 73512882 + 73512862 73512902 41 AGAAGCTGCCCCAGCGCTCGCATGGCCCCAAGGACTTTCTG AGAAGCTGCCCCAGCGCTCGCAGGGCCCCAAGGACTTTCTG < 41bp 0.536289166086667 0.84596534766462 0.51866114 0.9220904 prediction 0.619352363155905 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73512882 chr17:73512884 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_101313 2 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:73512880-73512900
64251 chr19 39898667 39898667 1 + C A rs3746083 39898663 + 39898643 39898683 41 TGCAACCTCCACCACCCCCTCGCGCTACAAGACTGAGCTAT TGCAACCTCCACCACCCCCTCGCGATACAAGACTGAGCTAT < 41bp 0.584729534348023 0.894387191645489 0.14022434 0.3591831 prediction 0.619315314594932 Functional Gain - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898663 chr19:39898667 synonymous SNV . 0 25 hm5C_associated_SNPs_101316 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:39898644-39898677
64251 chr16 89783937 89783937 1 + C A rs192948350 89783933 + 89783913 89783953 41 TGGGAGCTGCCTCTCTGTGACTCGCCCCTGGACCCACCGCC TGGGAGCTGCCTCTCTGTGACTCGACCCTGGACCCACCGCC < 41bp 0.455332536804897 0.809643446071944 0.058291733 0.16123444 prediction 0.619286892143888 Functional Gain - VPS9D1-AS1 ENSG00000261373 ncRNA_exonic Human antisense chr16:89783933 chr16:89783937 . . 0 25 hm5C_associated_SNPs_101318 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:89783800-89783980
64251 chr16 57787007 57787007 1 + C A LUSC 57787003 + 57786983 57787023 41 CTGCAGATAGGTGTGGCCTTCTCCCAGAGCAACGTCTCCTC CTGCAGATAGGTGTGGCCTTCTCCAAGAGCAACGTCTCCTC < 41bp 0.599891483169596 0.909534541743135 0.23199618 0.9655903 prediction 0.61928611714708 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57787003 chr16:57787007 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101319 0 0 3 SF3A3 POSTAR2 ENCODE chr16:57786950-57787019
64251 chr18 59931346 59931346 1 + C A OV 59931342 + 59931322 59931362 41 GCTAGAACAAGAGGGTACAACAGGCTGGGAGAGTTTACTGT GCTAGAACAAGAGGGTACAACAGGATGGGAGAGTTTACTGT < 41bp 0.580995128306712 0.890614707309466 0.81427455 0.8615193 prediction 0.619239158005507 Functional Gain - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59931342 chr18:59931346 synonymous SNV . 0 25 hm5C_associated_SNPs_101322 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr18:59931336-59931361
64251 chr19 13264078 13264078 1 + T G OV 13264075 + 13264055 13264095 41 TATCACTCCCGCATGCAGCGCGGTGGCCTGCGGCTGCACCG TATCACTCCCGCATGCAGCGCGGGGGCCTGCGGCTGCACCG < 41bp 0.569993757046434 0.879583534998294 0.5532195 0.8817422 prediction 0.619179555903719 Functional Gain - IER2 ENSG00000160888 CDS Human protein_coding chr19:13264075 chr19:13264078 synonymous SNV . 0 24 hm5C_associated_SNPs_101324 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:13264060-13264080
64251 chr3 52514358 52514358 1 + C A SARC 52514354 + 52514334 52514374 41 TCTAGTGGAGCCACACAGCCCTGCCTGGGCCCCCTGGCTGG TCTAGTGGAGCCACACAGCCCTGCATGGGCCCCCTGGCTGG < 41bp 0.421546332447946 0.809491314983532 0.022253573 0.111976326 prediction 0.618982629967065 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52514354 chr3:52514358 synonymous SNV . 0 25 hm5C_associated_SNPs_101332 0 0 6 BUD13 POSTAR2 ENCODE chr3:52514331-52514428
64251 chr4 41984232 41984232 1 + C A LUAD 41984228 + 41984208 41984248 41 CTCGCTGAACCAGTTGGACTCTCACGTTCTGCTGTGCTTCG CTCGCTGAACCAGTTGGACTCTCAAGTTCTGCTGTGCTTCG < 41bp 0.572782900235056 0.882268799942853 0.35136998 0.7606421 prediction 0.618971799415595 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984228 chr4:41984232 nonsynonymous SNV 0.151 4 25 hm5C_associated_SNPs_101333 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:41984201-41984247
64251 chr11 69466017 69466017 1 + C A UCEC 69466013 + 69465993 69466033 41 GGAGGAGGAGGTGGACCTGGCTTGCACACCCACCGACGTGC GGAGGAGGAGGTGGACCTGGCTTGAACACCCACCGACGTGC < 41bp 0.569953466917986 0.879422897431102 0.35114768 0.28293675 prediction 0.618938861026233 Functional Gain - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69466013 chr11:69466017 stopgain 0.997 1 25 hm5C_associated_SNPs_101337 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:69465954-69466024
64251 chr1 236712989 236712989 1 - A C rs56115130 236712992 - 236712972 236713012 41 GTCTTTATGGAGAAAAATAACTCTGGGGGATTCTCGAGTCT GTCTTTATGGAGAAAAATAACTCGGGGGGATTCTCGAGTCT < 41bp 0.508957020519365 0.818355201949487 0.14563528 0.4731128 prediction 0.618796362860244 Functional Gain - HEATR1;LGALS8 ENSG00000230325 ncRNA_intronic Human antisense chr1:236712992 chr1:236712989 . . 0 24 hm5C_associated_SNPs_101340 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:236712975-236712998
64251 chr19 18497248 18497248 1 + C A COAD 18497244 + 18497224 18497264 41 TTCGAACACCGACCTCGTCCCGGCCCCTGCAGTCCGGATAC TTCGAACACCGACCTCGTCCCGGCACCTGCAGTCCGGATAC < 41bp 0.434016265443185 0.809343039571342 0.2957179 0.5413237 prediction 0.618686079142684 Functional Gain - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18497244 chr19:18497248 synonymous SNV . 0 25 hm5C_associated_SNPs_101345 0 0 7 BUD13 POSTAR2 ENCODE chr19:18497222-18497282
64251 chr7 157209551 157209551 1 + C A rs1059752 157209547 + 157209527 157209567 41 AAAACGGGCCGGTATTTACACACGCGCAAAACACCCAGAGA AAAACGGGCCGGTATTTACACACGAGCAAAACACCCAGAGA < 41bp 0.445192352270142 0.809294786913347 0.30844915 0.19711846 prediction 0.618589573826693 Functional Gain - DNAJB6 ENSG00000105993 UTR3 Human protein_coding chr7:157209547 chr7:157209551 . . 0 25 hm5C_associated_SNPs_101347 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:157209548-157209606
64251 chrX 100079227 100079227 1 + C A rs150166686 100079223 + 100079203 100079243 41 CAATGAACCAGCAGAATCCTCAGGCCCCTCAGGCCCAGTCT CAATGAACCAGCAGAATCCTCAGGACCCTCAGGCCCAGTCT < 41bp 0.584583928405859 0.893717707597179 0.915642 0.9202935 prediction 0.618267558382641 Functional Gain - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100079223 chrX:100079227 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_101359 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:100079197-100079229
64251 chr16 722946 722946 1 + C A STAD 722942 + 722922 722962 41 CCACAGCACCATTACATGGACGGGCAGACCCCCTGCCTCTT CCACAGCACCATTACATGGACGGGAAGACCCCCTGCCTCTT < 41bp 0.575677013165729 0.884758541272142 0.84480387 0.82324106 prediction 0.618163056212826 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722942 chr16:722946 nonsynonymous SNV 0.984 0 25 hm5C_associated_SNPs_101362 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr16:722929-722958
64251 chr17 61768554 61768554 1 + T G STAD 61768551 + 61768531 61768571 41 TATGGCTGTCTGCGGGACCGCGCTGAGAAGACCCTGACCAT TATGGCTGTCTGCGGGACCGCGCGGAGAAGACCCTGACCAT < 41bp 0.438361140118846 0.808964629407398 0.1056349 0.8392304 prediction 0.617929258814797 Functional Gain - MAP3K3 ENSG00000198909 CDS Human protein_coding chr17:61768551 chr17:61768554 synonymous SNV . 0 24 hm5C_associated_SNPs_101371 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:61768531-61768569
64251 chr16 771422 771422 1 + C A rs149844405 771418 + 771398 771438 41 CTCCAGCCCGGCTTCCGGCGCGTGCCGCTGCGGCTGCAGGT CTCCAGCCCGGCTTCCGGCGCGTGACGCTGCGGCTGCAGGT < 41bp 0.520880207214613 0.829780632890884 0.43636146 0.6294311 prediction 0.617800851352542 Functional Gain - FAM173A ENSG00000103254 CDS Human protein_coding chr16:771418 chr16:771422 nonsynonymous SNV 0.565 3 25 hm5C_associated_SNPs_101372 0 0 3 DDX3X POSTAR2 ENCODE chr16:771398-771436
64251 chr19 4793724 4793724 1 + C A BLCA 4793720 + 4793700 4793740 41 GCCTTCAAGAAGACGGCCTACGAGCTGCTGGACGAGAAGCT GCCTTCAAGAAGACGGCCTACGAGATGCTGGACGAGAAGCT < 41bp 0.428929000527246 0.808739567662971 0.34228334 0.6839084 prediction 0.617479135325941 Functional Gain - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793720 chr19:4793724 nonsynonymous SNV 0.941 2 25 hm5C_associated_SNPs_101381 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:4793705-4793755
64251 chr1 210415271 210415271 1 + C A UCEC 210415267 + 210415247 210415287 41 TGCCTCCACTGCTGCCTCCTCTCCCTCCGCCTCTTCTTCCT TGCCTCCACTGCTGCCTCCTCTCCATCCGCCTCTTCTTCCT < 41bp 0.392220164329859 0.808593837563399 0.1850887 0.9613146 prediction 0.617187675126798 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415267 chr1:210415271 synonymous SNV . 0 25 hm5C_associated_SNPs_101389 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:210415246-210415294
64251 chr15 41745191 41745191 1 + C A PAAD 41745187 + 41745167 41745207 41 GAAGAAACAGGCCAACAAAACTGCCTCCTCAGGCAGTTCAG GAAGAAACAGGCCAACAAAACTGCATCCTCAGGCAGTTCAG < 41bp 0.398877223147475 0.808585921852146 0.3996672 0.22653085 prediction 0.617171843704292 Functional Gain - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41745187 chr15:41745191 synonymous SNV . 0 25 hm5C_associated_SNPs_101390 0 0 8 GRWD1 POSTAR2 ENCODE chr15:41745158-41745212
64251 chr7 64167281 64167281 1 + C A GBM 64167277 + 64167257 64167297 41 AATGTGGCAAGGCCTTTAAACAGGCCTCACACCTTACTATA AATGTGGCAAGGCCTTTAAACAGGACTCACACCTTACTATA < 41bp 0.555908144375526 0.864489923495547 0.91337633 0.85349023 prediction 0.617163558240041 Functional Gain - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64167277 chr7:64167281 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_101391 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:64167263-64167315
64251 chr4 56738061 56738061 1 + T G rs112233016 56738058 + 56738038 56738078 41 AAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTT AAACAGCAACAGCAGCGATTCAGGGATTTGCGAGAGCTTTT < 41bp 0.570461990626241 0.878912705711951 0.24568808 0.8925612 prediction 0.61690143017142 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56738058 chr4:56738061 nonsynonymous SNV 0.027 0 24 hm5C_associated_SNPs_101395 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:56738043-56738078
64251 chr11 58891882 58891882 1 + C A LUAD 58891878 + 58891858 58891898 41 GTTTACAGCATATGGTAAACCCAGCGAGAGTATCTACTCAG GTTTACAGCATATGGTAAACCCAGAGAGAGTATCTACTCAG < 41bp 0.555938599776937 0.864368319601632 0.09971383 0.17993835 prediction 0.616859439649389 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58891878 chr11:58891882 nonsynonymous SNV 0.023 0 25 hm5C_associated_SNPs_101397 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr11:58891862-58891894
64251 chr3 148744247 148744247 1 + C A OV 148744243 + 148744223 148744263 41 AATGAACTGTTTGCAGCTTTCAGACTTGGTCTATACACTGG AATGAACTGTTTGCAGCTTTCAGAATTGGTCTATACACTGG < 41bp 0.438825995578896 0.808350885245518 0.31194413 0.414985 prediction 0.616701770491035 Functional Gain - GYG1 ENSG00000163754 CDS Human protein_coding chr3:148744243 chr3:148744247 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_101401 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:148744216-148744254
64251 chr8 182580 182580 1 + C A rs114199088 182576 + 182556 182596 41 GCCCGGAAATGCTCCGAAGCCTGTCGCCCAGCTGCCAGATC GCCCGGAAATGCTCCGAAGCCTGTAGCCCAGCTGCCAGATC < 41bp 0.499635978659473 0.808318927635285 0.05144 0.10252729 prediction 0.616637855270569 Functional Gain - ZNF596 ENSG00000172748 UTR5 Human protein_coding chr8:182576 chr8:182580 . . 0 25 hm5C_associated_SNPs_101402 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr8:182560-182580
64251 chr6 27782983 27782983 1 + C A UCEC 27782979 + 27782959 27782999 41 GAAGCAGGTCCACCCCGACACCGGCATCTCTTCCAAGGCTA GAAGCAGGTCCACCCCGACACCGGAATCTCTTCCAAGGCTA < 41bp 0.536796734538971 0.845069138507592 0.058157563 0.17518598 prediction 0.616544807937241 Functional Gain - HIST1H2BM ENSG00000196374 CDS Human other chr6:27782979 chr6:27782983 synonymous SNV . 0 25 hm5C_associated_SNPs_101405 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:27782965-27782995
64251 chr19 10754452 10754452 1 + C A rs141207788 10754448 + 10754428 10754468 41 GCTGCTGGCCACAGTGAACACCCACGTTTATTCCTGCCTGC GCTGCTGGCCACAGTGAACACCCAAGTTTATTCCTGCCTGC < 41bp 0.442154526722256 0.808151485066395 0.11701316 0.24972612 prediction 0.61630297013279 Functional Gain - SLC44A2 ENSG00000129353 UTR3 Human protein_coding chr19:10754448 chr19:10754452 . . 0 25 hm5C_associated_SNPs_101413 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:10754443-10754482
64251 chr5 132387724 132387724 1 + C A rs114233919 132387720 + 132387700 132387740 41 CTTTCGAGATCTTCTCCGCCCCCGCTACCGGCGCCTCCTCT CTTTCGAGATCTTCTCCGCCCCCGATACCGGCGCCTCCTCT < 41bp 0.464341259433747 0.808140297796207 0.062947094 0.0662722 prediction 0.616280595592414 Functional Gain - HSPA4 ENSG00000170606 UTR5 Human protein_coding chr5:132387720 chr5:132387724 . . 0 25 hm5C_associated_SNPs_101414 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:132387660-132387780
64251 chr9 132572678 132572678 1 + C A rs111440015 132572674 + 132572654 132572694 41 ACCTCTGCAGCAGACCTGGACAGACAGGCCCCTCCCGCCTG ACCTCTGCAGCAGACCTGGACAGAAAGGCCCCTCCCGCCTG < 41bp 0.538153055670626 0.846287598914465 0.10446423 0.25447896 prediction 0.616269086487677 Functional Gain - TOR1B ENSG00000136816 UTR3 Human protein_coding chr9:132572674 chr9:132572678 . . 0 25 hm5C_associated_SNPs_101415 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:132572641-132572700
64251 chr11 73008107 73008107 1 + C A GBM 73008103 + 73008083 73008123 41 CGCACTGTCTGCTATGACCTCAGCCCGCCTGCCCTGGCCAC CGCACTGTCTGCTATGACCTCAGCACGCCTGCCCTGGCCAC < 41bp 0.41269306098755 0.808095501848074 0.46001273 0.4853043 prediction 0.616191003696147 Functional Gain - P2RY6 ENSG00000171631 CDS Human protein_coding chr11:73008103 chr11:73008107 nonsynonymous SNV 0.659 0 25 hm5C_associated_SNPs_101418 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:73008084-73008140
64251 chr7 27135780 27135780 1 + C A rs555460757 27135776 + 27135756 27135796 41 GCATTTAAATCCCCGGCGCTCCGCCGTCTAGGTGACGCGCA GCATTTAAATCCCCGGCGCTCCGCAGTCTAGGTGACGCGCA < 41bp 0.528870035801434 0.836950929622485 0.10852915 0.18215668 prediction 0.616161787642102 Functional Gain - HOTAIRM1 ENSG00000233429 ncRNA_exonic Human antisense chr7:27135776 chr7:27135780 . . 0 25 hm5C_associated_SNPs_101420 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:27135760-27135780
64251 chr14 55226975 55226975 1 + C A rs149535594 55226971 + 55226951 55226991 41 GCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCG GCCTACAGCTCCCCGAGCACCACCACCGAGGCTCGCCGCCG < 41bp 0.403076354705148 0.808074845113295 0.0906944 0.1434825 prediction 0.61614969022659 Functional Gain - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55226971 chr14:55226975 nonsynonymous SNV 0.136 1 25 hm5C_associated_SNPs_101421 0 0 2 PPIG POSTAR2 ENCODE chr14:55226938-55227001
64251 chr19 39915686 39915686 1 + C A rs183572190 39915682 + 39915662 39915702 41 GGGGGAGGGGCCCCCGCAGCCTCCCGGGGCTCCTGGTCCTC GGGGGAGGGGCCCCCGCAGCCTCCAGGGGCTCCTGGTCCTC < 41bp 0.585434633011227 0.893498232036747 0.08764675 0.9441128 prediction 0.61612719805104 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915682 chr19:39915686 synonymous SNV . 0 25 hm5C_associated_SNPs_101422 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:39915680-39915711
64251 chr8 22432377 22432377 1 + C A rs710098 22432373 + 22432353 22432393 41 GCATCTGCAGACGACCCCCGCAGCCTTTCCCTCGGACCCCC GCATCTGCAGACGACCCCCGCAGCATTTCCCTCGGACCCCC < 41bp 0.575312915206134 0.883365060727326 0.56967753 0.7838391 prediction 0.616104291042384 Functional Gain - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22432373 chr8:22432377 synonymous SNV . 0 25 hm5C_associated_SNPs_101423 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:22432339-22432433
64251 chr15 91478585 91478585 1 + C A rs572718253 91478581 + 91478561 91478601 41 GTGAGTGGTCCAGGGACCCCCGAGCCCCGGCCGGCCACCCC GTGAGTGGTCCAGGGACCCCCGAGACCCGGCCGGCCACCCC < 41bp 0.453283494535902 0.808028051329403 0.89328337 0.91391885 prediction 0.616056102658807 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91478581 chr15:91478585 nonsynonymous SNV 0.199 1 25 hm5C_associated_SNPs_101426 0 0 1 DDX3X POSTAR2 ENCODE chr15:91478516-91478599
64251 chr6 27114964 27114964 1 + T G THCA 27114961 + 27114941 27114981 41 CGCGCCAAGGCCAAGACCCGCTCTTCTCGGGCTGGGCTTCA CGCGCCAAGGCCAAGACCCGCTCGTCTCGGGCTGGGCTTCA < 41bp 0.452681722486938 0.807882544525438 0.16825849 0.13352826 prediction 0.615765089050876 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114961 chr6:27114964 synonymous SNV . 0 24 hm5C_associated_SNPs_101433 0 0 33 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr2 20870532 20870532 1 + C A rs184953707 20870528 + 20870508 20870548 41 CCCCCCCGCGCGTTCTGCCTCTTGCTGCGCGCAGTGGCAGG CCCCCCCGCGCGTTCTGCCTCTTGATGCGCGCAGTGGCAGG < 41bp 0.454461794668382 0.807762904610586 0.09561497 0.39369905 prediction 0.615525809221172 Functional Gain - GDF7 ENSG00000143869 CDS Human protein_coding chr2:20870528 chr2:20870532 nonsynonymous SNV 0.579 3 25 hm5C_associated_SNPs_101436 0 0 1 SND1 POSTAR2 ENCODE chr2:20870499-20870580
64251 chr7 73245853 73245853 1 + C A COAD 73245849 + 73245829 73245869 41 GTGGGGGGCAAGTGTACCAACTGCCTGGAGGATGAAAGCGC GTGGGGGGCAAGTGTACCAACTGCATGGAGGATGAAAGCGC < 41bp 0.58618282725944 0.893917646201713 0.21425474 0.17937085 prediction 0.615469637884546 Functional Gain - CLDN4 ENSG00000189143 CDS Human protein_coding chr7:73245849 chr7:73245853 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_101439 0 0 2 SND1 POSTAR2 ENCODE chr7:73245792-73245873
64251 chr8 97847376 97847376 1 + C A LUAD 97847372 + 97847352 97847392 41 CAAGGTGGGGGCTTTGGCATCTCTCATTCGATCCGTGGCCT CAAGGTGGGGGCTTTGGCATCTCTAATTCGATCCGTGGCCT < 41bp 0.41431303678647 0.807694151862983 0.33258095 0.8788921 prediction 0.615388303725965 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97847372 chr8:97847376 synonymous SNV . 0 25 hm5C_associated_SNPs_101444 0 0 1 SND1 POSTAR2 ENCODE chr8:97847364-97847407
64251 chr16 67913012 67913012 1 + C A BRCA 67913008 + 67912988 67913028 41 ACGGCACACTGAGGTGCTGCCTGCCGAAGAGGAAAATGACA ACGGCACACTGAGGTGCTGCCTGCAGAAGAGGAAAATGACA < 41bp 0.405828139708231 0.807587715222595 0.08005056 0.20026714 prediction 0.61517543044519 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913008 chr16:67913012 synonymous SNV . 0 25 hm5C_associated_SNPs_101450 0 0 4 FMR1 POSTAR2 ENCODE chr16:67912979-67913014
64251 chr1 48708137 48708137 1 + C A rs138087820 48708133 + 48708113 48708153 41 TCTTCTTTCCCTCCAGCTCACACGCCTCACATGGTGGACTC TCTTCTTTCCCTCCAGCTCACACGACTCACATGGTGGACTC < 41bp 0.58022085303502 0.887799790880882 0.1713118 0.31202275 prediction 0.615157875691724 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48708133 chr1:48708137 synonymous SNV . 0 25 hm5C_associated_SNPs_101451 0 0 4 BUD13 POSTAR2 ENCODE chr1:48708126-48708152
64251 chr6 167438310 167438310 1 + C A GBM 167438306 + 167438286 167438326 41 AAGCAAGCAGGAAGTCTGGCCTCGCTCTCGGATGCACCCCC AAGCAAGCAGGAAGTCTGGCCTCGATCTCGGATGCACCCCC < 41bp 0.493981963792141 0.80755963624233 0.21896216 0.8536687 prediction 0.61511927248466 Functional Gain - FGFR1OP ENSG00000213066 CDS Human protein_coding chr6:167438306 chr6:167438310 nonsynonymous SNV 0.009 0 25 hm5C_associated_SNPs_101452 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:167438274-167438316
64251 chr6 147637445 147637445 1 + C A PRAD 147637441 + 147637421 147637461 41 GCAGCCACCACCTTTGCCAACACCCGTGGGAGGGTCCAACC GCAGCCACCACCTTTGCCAACACCAGTGGGAGGGTCCAACC < 41bp 0.407906101604245 0.807480189715905 0.24263495 0.385948 prediction 0.614960379431811 Functional Gain - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147637441 chr6:147637445 synonymous SNV . 0 25 hm5C_associated_SNPs_101461 0 0 3 FXR2 POSTAR2 ENCODE chr6:147637390-147637501
64251 chr12 57920109 57920109 1 + C A LUAD 57920105 + 57920085 57920125 41 TCTCCTCAGGGAGCCCTCCCCAGCCCAGGCACCCCATCCAG TCTCCTCAGGGAGCCCTCCCCAGCACAGGCACCCCATCCAG < 41bp 0.586470163796612 0.89393588976174 0.6051072 0.6588373 prediction 0.614931451930257 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920105 chr12:57920109 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_101462 0 0 8 DDX59 POSTAR2 ENCODE chr12:57920050-57920115
64251 chr1 27679961 27679961 1 + C A SARC 27679957 + 27679937 27679977 41 GCCAACCGCCAGCTGGGGGGCACACGCCTCAGCCTGGGCAC GCCAACCGCCAGCTGGGGGGCACAAGCCTCAGCCTGGGCAC < 41bp 0.446051381245773 0.807329857871555 0.20223603 0.4385806 prediction 0.61465971574311 Functional Gain - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27679957 chr1:27679961 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101469 0 0 1 LSM11 POSTAR2 ENCODE chr1:27679868-27679973
64251 chr19 50435755 50435755 1 + C A rs1152227 50435751 + 50435731 50435771 41 CCCTCTGGAGCCTCCCTTACCCCCCGGCACCCTCCCCCAAC CCCTCTGGAGCCTCCCTTACCCCCAGGCACCCTCCCCCAAC < 41bp 0.407635798405999 0.807286970950878 0.025120944 0.18485278 prediction 0.614573941901756 Functional Gain - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50435751 chr19:50435755 synonymous SNV . 0 25 hm5C_associated_SNPs_101470 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50435711-50435756
64251 chr3 49042515 49042515 1 + T G rs62621815 49042513 + 49042493 49042533 41 AACTGGGGGCTGCCTTCAATCCTCAGACCAGGAACACCCAT AACTGGGGGCTGCCTTCAATCCGCAGACCAGGAACACCCAT < 41bp 0.490621854154732 0.807165251321305 0.111278206 0.72805786 prediction 0.61433050264261 Functional Gain - P4HTM ENSG00000178467 CDS Human protein_coding chr3:49042513 chr3:49042515 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_101477 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:49042500-49042520
64251 chr2 219679662 219679662 1 + C A rs140842830 219679658 + 219679638 219679678 41 TCCAGAAGTACAAGGTGGTCCTGGCCCCGGAGACGGGGGAG TCCAGAAGTACAAGGTGGTCCTGGACCCGGAGACGGGGGAG < 41bp 0.577317340809812 0.884295737079171 0.69849116 0.8458692 prediction 0.613956792538717 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219679658 chr2:219679662 nonsynonymous SNV 0.513 1 25 hm5C_associated_SNPs_101487 1 0 4 DDX55 POSTAR2 ENCODE chr2:219679649-219679696
64251 chr5 174156432 174156432 1 + C A LUSC 174156428 + 174156408 174156448 41 AAATGGCTGCAAAACCTATGCTGCCCTCCAGCTTCAGTCTC AAATGGCTGCAAAACCTATGCTGCACTCCAGCTTCAGTCTC < 41bp 0.412338770059716 0.806932317361576 0.061986655 0.099122286 prediction 0.613864634723152 Functional Gain - MSX2 ENSG00000120149 CDS Human protein_coding chr5:174156428 chr5:174156432 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101489 0 0 1 TNRC6B POSTAR2 GSE21578,GSM545219 chr5:174156416-174156436
64251 chr12 11323979 11323979 1 + C A rs148825190 11323975 + 11323955 11323995 41 CATGGCCCCCGCGGCGGCTCCGTCCTCCTTGGCCGTCAGGG CATGGCCCCCGCGGCGGCTCCGTCATCCTTGGCCGTCAGGG < 41bp 0.492496193767788 0.806931380228842 0.16994748 0.23324066 prediction 0.613862760457684 Functional Gain - SMIM10L1 ENSG00000256537 ncRNA_exonic Human protein_coding chr12:11323975 chr12:11323979 . . 0 25 hm5C_associated_SNPs_101490 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:11323961-11323979
64251 chr12 7311274 7311274 1 + C A rs376972753 7311270 + 7311250 7311290 41 AGTCCTGAGGTCCTGCAGCCCCGGCCCCTCCTCCGTGACCT AGTCCTGAGGTCCTGCAGCCCCGGACCCTCCTCCGTGACCT < 41bp 0.529785616265279 0.836689011801303 0.38999808 0.41201955 prediction 0.613806791072049 Functional Gain - CLSTN3 ENSG00000139182 UTR3 Human protein_coding chr12:7311270 chr12:7311274 . . 0 25 hm5C_associated_SNPs_101491 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr12:7311208-7311294
64251 chr5 135364760 135364760 1 + C A rs560533561 135364756 + 135364736 135364776 41 TCCCGCTCCATGGCGCTCTTCGTGCGGCTGCTGGCTCTCGC TCCCGCTCCATGGCGCTCTTCGTGAGGCTGCTGGCTCTCGC < 41bp 0.550474311481436 0.857278317065737 0.70619714 0.83714855 prediction 0.613608011168602 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135364756 chr5:135364760 synonymous SNV . 0 25 hm5C_associated_SNPs_101493 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:135364745-135364771
64251 chr5 80503117 80503117 1 + C A SARC 80503113 + 80503093 80503133 41 AGTCCTTGTCGGCCATGGAGCTGGCAGAACAGATCACCCTC AGTCCTTGTCGGCCATGGAGCTGGAAGAACAGATCACCCTC < 41bp 0.430206786466656 0.806766713209378 0.38537908 0.25396818 prediction 0.613533426418756 Functional Gain - RASGRF2 ENSG00000113319 CDS Human protein_coding chr5:80503113 chr5:80503117 nonsynonymous SNV 0.941 4 25 hm5C_associated_SNPs_101495 0 0 2 GRWD1 POSTAR2 ENCODE chr5:80503063-80503137
64251 chr7 93221028 93221028 1 + C A rs539101279 93221024 + 93221004 93221044 41 AATCACCGTCTTCTGCGTCGCTCGCGCTGGGAGCTGTAGAC AATCACCGTCTTCTGCGTCGCTCGAGCTGGGAGCTGTAGAC < 41bp 0.476935180619232 0.806735096342527 0.26909116 0.30686095 prediction 0.613470192685054 Functional Gain - CALCR;MIR4652 ENSG00000127928 UTR5 Human protein_coding chr7:93221024 chr7:93221028 . . 0 25 hm5C_associated_SNPs_101498 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:93221007-93221035
64251 chr19 8436298 8436298 1 + C A HNSC 8436294 + 8436274 8436314 41 CAGCTCACTGCACCCGTGGCCGGCCAGCTGGGCGCCACCAC CAGCTCACTGCACCCGTGGCCGGCAAGCTGGGCGCCACCAC < 41bp 0.584680070927078 0.891373851856126 0.3821514 0.7130606 prediction 0.613387561858096 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436294 chr19:8436298 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_101501 0 0 1 RPS3 POSTAR2 ENCODE chr19:8436236-8436342
64251 chr17 4837660 4837660 1 - A C rs570515282 4837663 - 4837643 4837683 41 AGCCAGGCCCGGGGCACTGTCACTTGCCGTCCCCTCTGCAG AGCCAGGCCCGGGGCACTGTCACGTGCCGTCCCCTCTGCAG < 41bp 0.570085077401505 0.876674706569312 0.15678343 0.32075328 prediction 0.613179258335614 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837663 chr17:4837660 nonsynonymous SNV 0.781 2 24 hm5C_associated_SNPs_101507 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:4837601-4837661
64251 chr8 146278082 146278082 1 + C A OV 146278078 + 146278058 146278098 41 AGTTTCCAGCGCCCGGAATCCTTCCACTGTCTGTCTCTGCC AGTTTCCAGCGCCCGGAATCCTTCAACTGTCTGTCTCTGCC < 41bp 0.403692475086504 0.80658614177135 0.25971338 0.36623967 prediction 0.6131722835427 Functional Gain - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278078 chr8:146278082 synonymous SNV . 0 25 hm5C_associated_SNPs_101508 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146278019-146278086
64251 chr3 113673211 113673211 1 + C A BLCA 113673207 + 113673187 113673227 41 CGACCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTG CGACCAGCCCGGGCATGGCACTGCAGGATATGTGGCATCTG < 41bp 0.425008309203632 0.806551147288917 0.41356167 0.34350264 prediction 0.613102294577834 Functional Gain - ZDHHC23 ENSG00000184307 CDS Human protein_coding chr3:113673207 chr3:113673211 synonymous SNV . 0 25 hm5C_associated_SNPs_101509 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:113673188-113673231
64251 chr2 74173946 74173946 1 + T A COAD 74173942 + 74173922 74173962 41 AGACATTTTCCTTTTTGAGCCGCCTGAAAGTACAGCTGGAG AGACATTTTCCTTTTTGAGCCGCCAGAAAGTACAGCTGGAG < 41bp 0.522262917605759 0.828761565046919 0.15995166 0.13477486 prediction 0.612997294882319 Functional Gain - DGUOK ENSG00000114956 CDS Human protein_coding chr2:74173942 chr2:74173946 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_101511 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:74173929-74173976
64251 chr14 89307486 89307486 1 + C A COAD 89307482 + 89307462 89307502 41 GGCTATCAGAACACCCAGAACCGCCTACACAGCCCGCCCTA GGCTATCAGAACACCCAGAACCGCATACACAGCCCGCCCTA < 41bp 0.405379740988703 0.80648111889823 0.23210773 0.34981406 prediction 0.612962237796459 Functional Gain - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307482 chr14:89307486 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_101513 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:89307453-89307487
64251 chr8 66619297 66619297 1 + C A STAD 66619293 + 66619273 66619313 41 CATACCACCACACCCTCCACCTCCCCCACCGCCCCTGCCTC CATACCACCACACCCTCCACCTCCACCACCGCCCCTGCCTC < 41bp 0.389499805375 0.806456881529075 0.051921725 0.94494313 prediction 0.61291376305815 Functional Gain - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66619293 chr8:66619297 synonymous SNV . 0 25 hm5C_associated_SNPs_101515 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:66619270-66619303
64251 chr11 2417910 2417910 1 + T A STAD 2417906 + 2417886 2417926 41 TCTTCTCCGGGAAGCTGTACCTCATCGGCATTGCTGCCATC TCTTCTCCGGGAAGCTGTACCTCAACGGCATTGCTGCCATC < 41bp 0.490864421674118 0.806433452302828 0.39464164 0.92269784 prediction 0.612866904605657 Functional Gain - CD81 ENSG00000110651 CDS Human protein_coding chr11:2417906 chr11:2417910 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_101517 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:2417869-2417917
64251 chr20 61461898 61461898 1 + C A rs73598379 61461894 + 61461874 61461914 41 GAAGGGCAGCATGGGAGACCCCGGCCTTCCAGGCCCCCAGG GAAGGGCAGCATGGGAGACCCCGGACTTCCAGGCCCCCAGG < 41bp 0.575236694806001 0.881664685411306 0.7643945 0.9083357 prediction 0.612855981210609 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61461894 chr20:61461898 synonymous SNV . 0 25 hm5C_associated_SNPs_101518 1 0 4 NOL12 POSTAR2 ENCODE chr20:61461883-61461908
64251 chr14 57741370 57741370 1 + C A GBM 57741366 + 57741346 57741386 41 TACAAAATTGAGCCAGTTGCCTGACTTGCTTCTGCAGGCTT TACAAAATTGAGCCAGTTGCCTGAATTGCTTCTGCAGGCTT < 41bp 0.422048131141971 0.806387062445214 0.13028008 0.16745201 prediction 0.612774124890427 Functional Gain - AP5M1 ENSG00000053770 CDS Human protein_coding chr14:57741366 chr14:57741370 nonsynonymous SNV 0.992 0 25 hm5C_associated_SNPs_101520 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:57741352-57741375
64251 chr1 147090756 147090756 1 + C A HNSC 147090752 + 147090732 147090772 41 TCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCC TCCACCCATTCCGGCACCAGCACCAAAGCCTGCCGCACCCC < 41bp 0.39874696151079 0.806371736948019 0.34611186 0.3072285 prediction 0.612743473896038 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147090752 chr1:147090756 synonymous SNV . 0 25 hm5C_associated_SNPs_101521 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:147090711-147090756
64251 chr9 103054773 103054773 1 + C A UCEC 103054769 + 103054749 103054789 41 AGGGGAAAGGCTTCGTGAAGCAGCCCTCCTGTATCAGGGTG AGGGGAAAGGCTTCGTGAAGCAGCACTCCTGTATCAGGGTG < 41bp 0.423767521535026 0.806331168374208 0.10851595 0.14394131 prediction 0.612662336748417 Functional Gain - INVS ENSG00000119509 CDS Human protein_coding chr9:103054769 chr9:103054773 nonsynonymous SNV 0.583 2 25 hm5C_associated_SNPs_101527 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:103054771-103054802
64251 chr16 72046117 72046117 1 + C A COAD 72046113 + 72046093 72046133 41 AGACTGGCTGTTCGCTTCACCTCCCTGGGGCTCCTTCCACG AGACTGGCTGTTCGCTTCACCTCCATGGGGCTCCTTCCACG < 41bp 0.60408551674055 0.910393685683479 0.32563323 0.9661863 prediction 0.612616337885859 Functional Gain - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046113 chr16:72046117 nonsynonymous SNV 0.848 2 25 hm5C_associated_SNPs_101530 0 0 2 PPIG POSTAR2 ENCODE chr16:72046042-72046150
64251 chr7 148950858 148950858 1 + C A ESCA 148950854 + 148950834 148950874 41 GCCTGTTGGTAGTAGAGTTCCTAGCAGCAGCAGAACTGTGG GCCTGTTGGTAGTAGAGTTCCTAGAAGCAGCAGAACTGTGG < 41bp 0.429489386069966 0.80627575047461 0.03977582 0.19395494 prediction 0.61255150094922 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148950854 chr7:148950858 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_101531 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148950826-148950859
64251 chr17 73515125 73515125 1 + C A SKCM 73515121 + 73515101 73515141 41 GTTATGTGGTTCGACGATTCCAACCAAGGTAAATCCCCTTC GTTATGTGGTTCGACGATTCCAACAAAGGTAAATCCCCTTC < 41bp 0.394968246968759 0.806259138005229 0.048036873 0.03693059 prediction 0.612518276010457 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73515121 chr17:73515125 nonsynonymous SNV 0.972 2 25 hm5C_associated_SNPs_101533 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:73515096-73515126
64251 chr12 123892161 123892161 1 + C A LUAD 123892157 + 123892137 123892177 41 CCTCACCTCATCCTCATCGCCTCCCGAGACATCGCGGCTGG CCTCACCTCATCCTCATCGCCTCCAGAGACATCGCGGCTGG < 41bp 0.592123734640236 0.898345765608964 0.26816446 0.9500555 prediction 0.612444061937455 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123892157 chr12:123892161 synonymous SNV . 0 25 hm5C_associated_SNPs_101539 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:123892125-123892162
64251 chr9 95870005 95870005 1 + C A rs34200537 95870001 + 95869981 95870021 41 GCAGGACACGCCTTTCCTGACAGGCCATGGGCGCTTGAGTG GCAGGACACGCCTTTCCTGACAGGACATGGGCGCTTGAGTG < 41bp 0.578859148655338 0.885079418471851 0.38807636 0.45212406 prediction 0.612440539633026 Functional Gain - CARD19 ENSG00000165233 CDS Human protein_coding chr9:95870001 chr9:95870005 synonymous SNV . 0 25 hm5C_associated_SNPs_101540 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr9:95869999-95870037
64251 chr5 179018717 179018717 1 + T A LIHC 179018713 + 179018693 179018733 41 TGTACAGTGATGTGTGGAAGCAGCTAAAAGAGGAGAAGAAA TGTACAGTGATGTGTGGAAGCAGCAAAAAGAGGAGAAGAAA < 41bp 0.497797249625955 0.806121283548424 0.8792466 0.43274826 prediction 0.612242567096847 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:179018713 chr5:179018717 nonsynonymous SNV 0.988 4 25 hm5C_associated_SNPs_101545 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:179018667-179018722
64251 chr13 31231786 31231786 1 + T G READ 31231783 + 31231763 31231803 41 ACTAATGACCAACACGCTCTCAGTAATGAGAAACCAGTATC ACTAATGACCAACACGCTCTCAGGAATGAGAAACCAGTATC < 41bp 0.473340185321897 0.806106336225012 0.19801724 0.9056237 prediction 0.612212672450023 Functional Gain - USPL1 ENSG00000132952 CDS Human protein_coding chr13:31231783 chr13:31231786 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_101548 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr13:31231773-31231811
64251 chr4 30724143 30724143 1 + C A LUSC 30724139 + 30724119 30724159 41 CGCCTTGACGAGACGTCCGGCTGGCTCAGCGTCCTGCACCG CGCCTTGACGAGACGTCCGGCTGGATCAGCGTCCTGCACCG < 41bp 0.442254043314978 0.806078675068176 0.22414777 0.41355175 prediction 0.612157350136352 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724139 chr4:30724143 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_101550 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr4:30724133-30724154
64251 chr13 45952672 45952672 1 + T G rs199665813 45952669 + 45952649 45952689 41 TGCCTTCTGCCCTTAGGCTCCGGTAGATTGCAAATGACCTG TGCCTTCTGCCCTTAGGCTCCGGGAGATTGCAAATGACCTG < 41bp 0.465594873429631 0.806052120577375 0.306157 0.7372124 prediction 0.61210424115475 Functional Gain - TPT1-AS1 ENSG00000170919 ncRNA_exonic Human processed_transcript chr13:45952669 chr13:45952672 . . 0 24 hm5C_associated_SNPs_101553 0 0 1 PPIG POSTAR2 ENCODE chr13:45952664-45952680
64251 chr4 2877668 2877668 1 + T G LUSC 2877665 + 2877645 2877685 41 GAATGGTGATTCTCGTGCTGCGGTGGTGACCTCACCACCCC GAATGGTGATTCTCGTGCTGCGGGGGTGACCTCACCACCCC < 41bp 0.451403251276171 0.805944303549838 0.5425929 0.92714626 prediction 0.611888607099676 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2877665 chr4:2877668 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_101558 0 0 9 RTCB POSTAR2 GSE38201,GSM936508 chr4:2877650-2877676
64251 chr14 102680312 102680312 1 + C A rs142602935 102680308 + 102680288 102680328 41 CGATTCATGGAACACAGCGTCTGGCGTCCAGCTTTGTGGGT CGATTCATGGAACACAGCGTCTGGAGTCCAGCTTTGTGGGT < 41bp 0.551922062277451 0.857744718925614 0.6907436 0.59861284 prediction 0.611645313296326 Functional Gain - WDR20 ENSG00000140153 UTR3 Human protein_coding chr14:102680308 chr14:102680312 . . 0 25 hm5C_associated_SNPs_101563 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr14:102680288-102680314
64251 chr19 37266929 37266929 1 + C A rs1227808 37266925 + 37266905 37266945 41 CTTTCTCGTCGCTGCGCCTGCTCGCTGAAGGAGTCACCTAC CTTTCTCGTCGCTGCGCCTGCTCGATGAAGGAGTCACCTAC < 41bp 0.576362790958362 0.882039387158054 0.35006186 0.6739191 prediction 0.611353192399384 Functional Gain - LOC728485 ENSG00000267260 UTR3 Human lincRNA chr19:37266925 chr19:37266929 . . 0 25 hm5C_associated_SNPs_101574 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:37266916-37266943
64251 chr7 6194153 6194153 1 + C A rs569864999 6194149 + 6194129 6194169 41 CGCACCTGCCCCCGGGAGCGCGACCGCCAGGACCGCCACGC CGCACCTGCCCCCGGGAGCGCGACAGCCAGGACCGCCACGC < 41bp 0.431594290759824 0.805647534401741 0.9235935 0.92625856 prediction 0.611295068803483 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6194149 chr7:6194153 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_101577 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:6194140-6194160
64251 chr12 57943874 57943874 1 + C A rs566707896 57943870 + 57943850 57943890 41 CCCAGGTCGCCCGCATCCCGCTGCCGCAGGAGAGAGACAGC CCCAGGTCGCCCGCATCCCGCTGCAGCAGGAGAGAGACAGC < 41bp 0.462883543902175 0.805576351784684 0.342722 0.31614047 prediction 0.611152703569368 Functional Gain - KIF5A ENSG00000155980 UTR5 Human protein_coding chr12:57943870 chr12:57943874 . . 0 25 hm5C_associated_SNPs_101582 0 0 1 SF3B1 POSTAR2 ENCODE chr12:57943867-57943897
64251 chr19 30935925 30935925 1 + C A GBM 30935921 + 30935901 30935941 41 CACGGCGTCCCGGAGGGGGACAAGCACTCCCTCCTGGGATG CACGGCGTCCCGGAGGGGGACAAGAACTCCCTCCTGGGATG < 41bp 0.418030402133127 0.805528716916518 0.4627257 0.79580194 prediction 0.611057433833035 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935921 chr19:30935925 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_101583 0 0 2 FUS POSTAR2 SRX029328 chr19:30935924-30935952
64251 chr16 30095042 30095042 1 + C A SKCM 30095038 + 30095018 30095058 41 CTGGATCAGATTCGGACAATCGACCGAAAGCAAGAGGTGCC CTGGATCAGATTCGGACAATCGACAGAAAGCAAGAGGTGCC < 41bp 0.593391804244331 0.898916024512363 0.29023218 0.40809506 prediction 0.611048440536065 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30095038 chr16:30095042 synonymous SNV . 0 25 hm5C_associated_SNPs_101584 0 0 12 FUS POSTAR2 DRA001158,DRS012384 chr16:30094995-30095047
64251 chr19 50302705 50302705 1 + C A UCEC 50302701 + 50302681 50302721 41 ACGCTGGCCAGCTCCGAGTTCTCCCATGAAGCCGTCAAGAC ACGCTGGCCAGCTCCGAGTTCTCCAATGAAGCCGTCAAGAC < 41bp 0.370797527426548 0.805523678252546 0.049157858 0.9671363 prediction 0.611047356505092 Functional Gain - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50302701 chr19:50302705 nonsynonymous SNV 0.967 3 25 hm5C_associated_SNPs_101585 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50302677-50302705
64251 chr6 348878 348878 1 + C A LUSC 348874 + 348854 348894 41 AGCAAGGGCGCACAGAGCCCCAGCCCGGCGCCAGGCGGTGG AGCAAGGGCGCACAGAGCCCCAGCACGGCGCCAGGCGGTGG < 41bp 0.419831505572693 0.805296920931402 0.12014654 0.14765537 prediction 0.610593841862805 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348874 chr6:348878 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_101592 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:348878-348879
64251 chr15 76630195 76630195 1 + C A LUSC 76630191 + 76630171 76630211 41 GTTTATCCTGCGGGTGTCGCCCGACCTCGAGTGGCACGCGG GTTTATCCTGCGGGTGTCGCCCGAACTCGAGTGGCACGCGG < 41bp 0.438402947113194 0.805273699090182 0.7644062 0.6409365 prediction 0.610547398180365 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76630191 chr15:76630195 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_101595 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:76630159-76630199
64251 chr1 114447978 114447978 1 + C A rs28364566 114447974 + 114447954 114447994 41 AGTGCCCGGCTCGGCCTCCGCTCCCGCGCGGTTGGGAGTGT AGTGCCCGGCTCGGCCTCCGCTCCAGCGCGGTTGGGAGTGT < 41bp 0.563053018720836 0.868254054492375 0.09588975 0.8252633 prediction 0.610402071543077 Functional Gain - DCLRE1B ENSG00000118655 UTR5 Human protein_coding chr1:114447974 chr1:114447978 . . 0 25 hm5C_associated_SNPs_101599 0 0 2 DDX3X POSTAR2 ENCODE chr1:114447965-114448057
64251 chr3 15477870 15477870 1 + T G OV 15477868 + 15477848 15477888 41 GAGCTGAGGGCTGAAGTTGACATTATTGAACAAATGAGCAG GAGCTGAGGGCTGAAGTTGACAGTATTGAACAAATGAGCAG < 41bp 0.517220982170958 0.822376533020962 0.18499506 0.39971715 prediction 0.610311101700009 Functional Gain - EAF1 ENSG00000144597 CDS Human protein_coding chr3:15477868 chr3:15477870 nonsynonymous SNV 0.786 1 23 hm5C_associated_SNPs_101603 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:15477850-15477888
64251 chr6 43034801 43034801 1 + T A STAD 43034797 + 43034777 43034817 41 GCCCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCC GCCCTTAGCATCCGGGAGAGCACCATGGGACCTGACCATCC < 41bp 0.521201088673144 0.826348305527719 0.51377743 0.78138244 prediction 0.61029443370915 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43034797 chr6:43034801 nonsynonymous SNV 0.980 4 25 hm5C_associated_SNPs_101604 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr6:43034784-43034810
64251 chr16 68330375 68330375 1 + T G ACC 68330372 + 68330352 68330392 41 GCCTGTCTGTTGTTGGACAGCTCTACCTCCGCTGGAAGGAG GCCTGTCTGTTGTTGGACAGCTCGACCTCCGCTGGAAGGAG < 41bp 0.571320299474037 0.876415468600221 0.2333658 0.06359398 prediction 0.610190338252368 Functional Gain - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330372 chr16:68330375 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_101607 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:68330375-68330376
64251 chr1 32662746 32662746 1 + C A rs114079217 32662742 + 32662722 32662762 41 CCCTACCCCAGCCCCTGTGCCAGGCTAAGCTGGTACAAGAG CCCTACCCCAGCCCCTGTGCCAGGATAAGCTGGTACAAGAG < 41bp 0.529003884566437 0.83398001666292 0.55720544 0.7251212 prediction 0.609952264192967 Functional Gain - TXLNA ENSG00000084652 UTR3 Human protein_coding chr1:32662742 chr1:32662746 . . 0 25 hm5C_associated_SNPs_101614 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:32662669-32662746
64251 chr5 169018164 169018164 1 + T A BRCA 169018160 + 169018140 169018180 41 TTAAACAACAACAAAAAATGCACCTGGAGAAATTGGAAGAA TTAAACAACAACAAAAAATGCACCAGGAGAAATTGGAAGAA < 41bp 0.486258056719165 0.804915652719695 0.6931833 0.56793183 prediction 0.60983130543939 Functional Gain - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169018160 chr5:169018164 nonsynonymous SNV 0.023 3 25 hm5C_associated_SNPs_101617 0 0 14 NOP58 POSTAR2 GSE43666,GSM1067861 chr5:169018136-169018174
64251 chr9 100245510 100245510 1 + C A COAD 100245506 + 100245486 100245526 41 ACCCAGGCTACTTCGTCATCCAGCCTTGGCAGGAGATACAT ACCCAGGCTACTTCGTCATCCAGCATTGGCAGGAGATACAT < 41bp 0.396957809448116 0.804908393356553 0.090623975 0.10041404 prediction 0.609816786713107 Functional Gain - TDRD7 ENSG00000196116 CDS Human protein_coding chr9:100245506 chr9:100245510 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_101618 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:100245508-100245529
64251 chr22 38877312 38877312 1 + T A OV 38877308 + 38877288 38877328 41 TGGAGAGGCTGAGACCATAACTACTCACTACCTGTTCTTTC TGGAGAGGCTGAGACCATAACTACACACTACCTGTTCTTTC < 41bp 0.521740873871856 0.826571967930427 0.18042576 0.38314247 prediction 0.609662188117142 Functional Gain - KDELR3 ENSG00000100196 CDS Human protein_coding chr22:38877308 chr22:38877312 synonymous SNV . 0 25 hm5C_associated_SNPs_101622 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:38877300-38877320
64251 chr5 78373431 78373431 1 + C A rs682985 78373427 + 78373407 78373447 41 AGAGGCAGTGATAGAACACCCAGACGCAGGTTGGTGTCCAC AGAGGCAGTGATAGAACACCCAGAAGCAGGTTGGTGTCCAC < 41bp 0.583723102884106 0.88853914744666 0.2595055 0.27811685 prediction 0.609632089125109 Functional Gain - BHMT2 ENSG00000132840 CDS Human protein_coding chr5:78373427 chr5:78373431 nonsynonymous SNV 0.070 0 25 hm5C_associated_SNPs_101624 0 0 3 GRWD1 POSTAR2 ENCODE chr5:78373305-78373437
64251 chr3 112299984 112299984 1 + T G UCEC 112299981 + 112299961 112300001 41 GTCTTGATGGCCCAGGTTACCACTGTCATTATCACAACAGT GTCTTGATGGCCCAGGTTACCACGGTCATTATCACAACAGT < 41bp 0.528790376518217 0.83358899637681 0.13540718 0.5397633 prediction 0.609597239717185 Functional Gain - SLC35A5 ENSG00000138459 CDS Human protein_coding chr3:112299981 chr3:112299984 synonymous SNV . 0 24 hm5C_associated_SNPs_101626 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:112299966-112299993
64251 chr18 77895180 77895180 1 + T A OV 77895176 + 77895156 77895196 41 GTCTGTCACTCTGCCGGTTCCCCCTGGAGGCCTTGCGACTG GTCTGTCACTCTGCCGGTTCCCCCAGGAGGCCTTGCGACTG < 41bp 0.489013321056105 0.804790828536747 0.09726778 0.2507215 prediction 0.609581657073495 Functional Gain - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895176 chr18:77895180 synonymous SNV . 0 25 hm5C_associated_SNPs_101628 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr18:77895129-77895195
64251 chr15 76196876 76196876 1 + C A GBM 76196872 + 76196852 76196892 41 AGTGTGTGCGCAGAGTATTGCGGACCCATCGGAGCGTAACC AGTGTGTGCGCAGAGTATTGCGGAACCATCGGAGCGTAACC < 41bp 0.572739636219339 0.877492257286649 0.89901537 0.9064821 prediction 0.60950524213462 Functional Gain - FBXO22 ENSG00000167196 CDS Human protein_coding chr15:76196872 chr15:76196876 nonsynonymous SNV 0.956 0 25 hm5C_associated_SNPs_101630 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:76196847-76196882
64251 chr8 29961918 29961918 1 + T G UCEC 29961915 + 29961895 29961935 41 GATACAGATGCTATGAGTAACGCTTGTAAGGAACTTGCCAT GATACAGATGCTATGAGTAACGCGTGTAAGGAACTTGCCAT < 41bp 0.451240612333521 0.804650945163436 0.04006657 0.18943956 prediction 0.609301890326873 Functional Gain - LEPROTL1 ENSG00000104660 CDS Human protein_coding chr8:29961915 chr8:29961918 synonymous SNV . 0 24 hm5C_associated_SNPs_101638 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917669 chr8:29961884-29961920
64251 chrX 118370517 118370517 1 + C A UCEC 118370513 + 118370493 118370533 41 ACAGCGACGACGACGAGCCGCCCCCTCTGCCCCGCCTCAAG ACAGCGACGACGACGAGCCGCCCCATCTGCCCCGCCTCAAG < 41bp 0.428135107353939 0.804610898814793 0.030389696 0.1274715 prediction 0.609221797629586 Functional Gain - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118370513 chrX:118370517 nonsynonymous SNV 0.968 1 25 hm5C_associated_SNPs_101640 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:118370498-118370528
64251 chr12 123341245 123341245 1 + C A rs59499651 123341241 + 123341221 123341261 41 CCAAGGCCGGAGAGCTGGCCCGCGCGCAGGAGGCCCTGAGC CCAAGGCCGGAGAGCTGGCCCGCGAGCAGGAGGCCCTGAGC < 41bp 0.590859097501505 0.895440161423083 0.49043718 0.5748117 prediction 0.609162127843156 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123341241 chr12:123341245 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_101643 0 0 8 BUD13 POSTAR2 ENCODE chr12:123341168-123341266
64251 chr10 114925530 114925530 1 + C A TGCT 114925526 + 114925506 114925546 41 CCTGTCCATGATGCCTCCGCCACCCGCCCTCCTGCTCGCTG CCTGTCCATGATGCCTCCGCCACCAGCCCTCCTGCTCGCTG < 41bp 0.538152051700267 0.842640670867915 0.2937212 0.22974017 prediction 0.608977238335297 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925526 chr10:114925530 synonymous SNV . 0 25 hm5C_associated_SNPs_101648 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:114925509-114925531
64251 chr7 38247143 38247143 1 + C A GBM 38247139 + 38247119 38247159 41 CAGAAGACATGGAGAACGCTCTCACCGGGAGCCAGAGCTCC CAGAAGACATGGAGAACGCTCTCAACGGGAGCCAGAGCTCC < 41bp 0.392467834018102 0.804425326649227 0.024170429 0.06601295 prediction 0.608850653298454 Functional Gain - STARD3NL ENSG00000010270 CDS Human protein_coding chr7:38247139 chr7:38247143 nonsynonymous SNV 0.717 0 25 hm5C_associated_SNPs_101654 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:38247142-38247143
64251 chr11 6292922 6292922 1 + C A rs199821533 6292918 + 6292898 6292938 41 CACAGGAAAAGGTAGCTTACCTGACACAAGAGGAATAAGAA CACAGGAAAAGGTAGCTTACCTGAAACAAGAGGAATAAGAA < 41bp 0.456514908182135 0.804350175379459 0.15497452 0.34337217 prediction 0.608700350758918 Functional Gain - CCKBR ENSG00000110148 UTR3 Human protein_coding chr11:6292918 chr11:6292922 . . 0 25 hm5C_associated_SNPs_101657 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr11:6292900-6292940
64251 chr11 64128041 64128041 1 + C A LIHC 64128037 + 64128017 64128057 41 CGCGTGTATGGGGGTGAGATCGTGCTGGCCCTGGAACACCT CGCGTGTATGGGGGTGAGATCGTGATGGCCCTGGAACACCT < 41bp 0.58465682560267 0.888941514511061 0.8590262 0.8811319 prediction 0.608569377816782 Functional Gain - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128037 chr11:64128041 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101662 0 0 4 BUD13 POSTAR2 ENCODE chr11:64128023-64128126
64251 chr12 49742765 49742765 1 + C A LUAD 49742761 + 49742741 49742781 41 GCCACGCCCTGCTCTGGATGCTGACCCTGGGGGGAGGTGGG GCCACGCCCTGCTCTGGATGCTGAACCTGGGGGGAGGTGGG < 41bp 0.402771024738891 0.804270079930452 0.3826328 0.7034251 prediction 0.608540159860903 Functional Gain - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742761 chr12:49742765 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_101663 0 0 3 DDX3X POSTAR2 ENCODE chr12:49742746-49742806
64251 chr2 224824475 224824475 1 + C A rs200574289 224824471 + 224824451 224824491 41 AACAAGGGACATCTTTTTCACAGACTTGCCTTACACAGTTT AACAAGGGACATCTTTTTCACAGAATTGCCTTACACAGTTT < 41bp 0.429221215466276 0.804192908352807 0.33533722 0.37355 prediction 0.608385816705614 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824471 chr2:224824475 nonsynonymous SNV 0.397 0 25 hm5C_associated_SNPs_101667 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:224824351-224824482
64251 chr1 89236120 89236120 1 + C A rs35207128 89236116 + 89236096 89236136 41 TCATACGAATGCAGATTCTTCAGGCAGTCCAGACTAATGAA TCATACGAATGCAGATTCTTCAGGAAGTCCAGACTAATGAA < 41bp 0.422523521948135 0.803986001900845 0.7242791 0.613339 prediction 0.60797200380169 Functional Gain - PKN2 ENSG00000065243 CDS Human protein_coding chr1:89236116 chr1:89236120 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_101678 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:89236029-89236137
64251 chr14 89307233 89307233 1 + C A BLCA 89307229 + 89307209 89307249 41 GCCCTGGAACGTCTTTGAAACTCCCTGGAACTAATCAGACA GCCCTGGAACGTCTTTGAAACTCCATGGAACTAATCAGACA < 41bp 0.386738039360042 0.803935036916239 0.22433391 0.9636776 prediction 0.607870073832477 Functional Gain - TTC8 ENSG00000165533 CDS Human protein_coding chr14:89307229 chr14:89307233 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_101679 0 0 1 SF3B4 POSTAR2 ENCODE chr14:89307174-89307234
64251 chr3 50614990 50614990 1 + T G rs2232251 50614988 + 50614968 50615008 41 AAGCTGCTATCTCTCTGACCCATGAGAATGCTCAGAGGTAG AAGCTGCTATCTCTCTGACCCAGGAGAATGCTCAGAGGTAG < 41bp 0.531629489213609 0.835547690893931 0.1891515 0.8773847 prediction 0.607836403360643 Functional Gain - HEMK1 ENSG00000114735 CDS Human protein_coding chr3:50614988 chr3:50614990 nonsynonymous SNV 0.808 0 23 hm5C_associated_SNPs_101680 0 0 3 BUD13 POSTAR2 ENCODE chr3:50614939-50615000
64251 chr14 21464975 21464975 1 + T G SKCM 21464973 + 21464953 21464993 41 TCGTTGTGCCCGTGTCAGCTCCTGGGGAGATCTTTTACCTG TCGTTGTGCCCGTGTCAGCTCCGGGGGAGATCTTTTACCTG < 41bp 0.517029282423823 0.820910446897315 0.8620981 0.93924296 prediction 0.607762328946983 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464973 chr14:21464975 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_101683 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:21464934-21464997
64251 chr7 97822533 97822533 1 + C A LIHC 97822529 + 97822509 97822549 41 GGGTGAGTGTAGGGAGTAGTCTCCCGGAACTGGGACAGGAA GGGTGAGTGTAGGGAGTAGTCTCCAGGAACTGGGACAGGAA < 41bp 0.423047239072762 0.803840160355183 0.10521811 0.9547218 prediction 0.607680320710365 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822529 chr7:97822533 nonsynonymous SNV 0.007 1 25 hm5C_associated_SNPs_101687 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr7:97822506-97822645
64251 chr5 131722739 131722739 1 + T G LGG 131722736 + 131722716 131722756 41 GGTTCATCCCTGAGTCCCCCCGATGGCTCATCTCTCAGGGA GGTTCATCCCTGAGTCCCCCCGAGGGCTCATCTCTCAGGGA < 41bp 0.408819155317551 0.80376297280915 0.20436943 0.91681314 prediction 0.607525945618301 Functional Gain - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131722736 chr5:131722739 nonsynonymous SNV 0.941 4 24 hm5C_associated_SNPs_101695 0 0 1 BUD13 POSTAR2 ENCODE chr5:131722702-131722790
64251 chr11 832997 832997 1 + C A rs533528756 832993 + 832973 833013 41 CGCCCCCGCAGCTGCTGCCGCCGCCGCCAGGGCCCGGACTC CGCCCCCGCAGCTGCTGCCGCCGCAGCCAGGGCCCGGACTC < 41bp 0.468973169096102 0.803734119932279 0.3343788 0.298782 prediction 0.607468239864558 Functional Gain - CD151 ENSG00000177697 UTR5 Human protein_coding chr11:832993 chr11:832997 . . 0 25 hm5C_associated_SNPs_101696 0 0 5 DDX3X POSTAR2 ENCODE chr11:832957-833027
64251 chr2 128180553 128180553 1 + C A rs201371512 128180549 + 128180529 128180569 41 CTAGATCCCCGGCTGGACTACCGGCGCCCGCGCCCCTCGGG CTAGATCCCCGGCTGGACTACCGGAGCCCGCGCCCCTCGGG < 41bp 0.561581175485089 0.865186282590095 0.908159 0.9004814 prediction 0.607210214210012 Functional Gain - PROC ENSG00000115718 intronic Human protein_coding chr2:128180549 chr2:128180553 . . 0 25 hm5C_associated_SNPs_101701 0 0 1 GRWD1 POSTAR2 ENCODE chr2:128180545-128180555
64251 chr17 48745239 48745239 1 + C A UCEC 48745235 + 48745215 48745255 41 GCTGCTCAGGTGACCCTGATCACCCTCTGGGTGTACGTGTA GCTGCTCAGGTGACCCTGATCACCATCTGGGTGTACGTGTA < 41bp 0.387738209199274 0.80351261590901 0.09125504 0.13684115 prediction 0.607025231818021 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48745235 chr17:48745239 nonsynonymous SNV 0.912 3 25 hm5C_associated_SNPs_101705 0 0 1 EIF3H POSTAR2 ENCODE chr17:48745234-48745298
64251 chr11 57235309 57235309 1 + C A UCEC 57235305 + 57235285 57235325 41 ACCTTTGGGTCCAACCTGCTCACCCTGTGGCTCTTCTCCAA ACCTTTGGGTCCAACCTGCTCACCATGTGGCTCTTCTCCAA < 41bp 0.397251755841003 0.803499657348409 0.014393657 0.025324315 prediction 0.606999314696819 Functional Gain - RTN4RL2 ENSG00000186907 CDS Human protein_coding chr11:57235305 chr11:57235309 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_101707 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57235241-57235364
64251 chr9 127631476 127631476 1 + C A rs535215872 127631472 + 127631452 127631492 41 AGGTGCTGGGAGCAGCCGGGCAGCCGCTTCCCGCCCCCGAG AGGTGCTGGGAGCAGCCGGGCAGCAGCTTCCCGCCCCCGAG < 41bp 0.484364218940356 0.803479119787801 0.4739718 0.47147003 prediction 0.606958239575601 Functional Gain - ARPC5L ENSG00000136950 UTR5 Human protein_coding chr9:127631472 chr9:127631476 . . 0 25 hm5C_associated_SNPs_101708 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:127631451-127631485
64251 chr10 89692888 89692888 1 + T G UCEC 89692885 + 89692865 89692905 41 AATCATGTTGCAGCAATTCACTGTAAAGCTGGAAAGGGACG AATCATGTTGCAGCAATTCACTGGAAAGCTGGAAAGGGACG < 41bp 0.46397254526373 0.803470204993698 0.1219033 0.29465193 prediction 0.606940409987396 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89692885 chr10:89692888 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_101709 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:89692878-89692922
64251 chr17 76203577 76203577 1 + C A rs139721769 76203573 + 76203553 76203593 41 CGGGGTTTCAACATATTGGCCAGGCTGGTCTCAAACTCCTA CGGGGTTTCAACATATTGGCCAGGATGGTCTCAAACTCCTA < 41bp 0.479793774291464 0.803436197491011 0.081585705 0.09606275 prediction 0.606872394982022 Functional Gain - AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203573 chr17:76203577 . . 0 25 hm5C_associated_SNPs_101711 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76203576-76203626
64251 chr5 176863247 176863247 1 + C A OV 176863243 + 176863223 176863263 41 GAGGTCCCCGAGGAGTATTCCGAGCGCTTTTCCCCGCAGGC GAGGTCCCCGAGGAGTATTCCGAGAGCTTTTCCCCGCAGGC < 41bp 0.578376493820711 0.881808741955509 0.8436541 0.9055053 prediction 0.606864496269595 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863243 chr5:176863247 nonsynonymous SNV 0.229 2 25 hm5C_associated_SNPs_101712 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:176863227-176863265
64251 chr19 15793218 15793218 1 + C A LUSC 15793214 + 15793194 15793234 41 GCCAGGACAAGTGGCAGCACCTGGCCTCAGAGGGCAGCAGT GCCAGGACAAGTGGCAGCACCTGGACTCAGAGGGCAGCAGT < 41bp 0.594067785585437 0.897488990303923 0.29512113 0.8560926 prediction 0.606842409436972 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15793214 chr19:15793218 nonsynonymous SNV 0.959 1 25 hm5C_associated_SNPs_101716 0 0 1 PPIG POSTAR2 ENCODE chr19:15793200-15793218
64251 chr11 67160217 67160217 1 + T G LUSC 67160215 + 67160195 67160235 41 AGCAATACCAGGCAGCCACCCCTGGTCAGGACCTGCTGCGC AGCAATACCAGGCAGCCACCCCGGGTCAGGACCTGCTGCGC < 41bp 0.460126441083874 0.803336559430892 0.062662214 0.8991482 prediction 0.606673118861783 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160215 chr11:67160217 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_101724 0 0 6 DDX24 POSTAR2 ENCODE chr11:67160168-67160240
64251 chr9 37080159 37080159 1 + C A UCEC 37080155 + 37080135 37080175 41 TCGGCGTCTCCGGTCCGCCCCTCACTTGTGGTGGGGCGCAG TCGGCGTCTCCGGTCCGCCCCTCAATTGTGGTGGGGCGCAG < 41bp 0.463503162921616 0.80324200781386 0.22943455 0.9108317 prediction 0.606484015627719 Functional Gain - EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37080155 chr9:37080159 . . 0 25 hm5C_associated_SNPs_101730 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:37080158-37080159
64251 chr4 25351214 25351214 1 + C A ACC 25351210 + 25351190 25351230 41 TTGGTGGCTTGGTTGAACCTCTGGCTATTACATTCAAGAAG TTGGTGGCTTGGTTGAACCTCTGGATATTACATTCAAGAAG < 41bp 0.592065791912311 0.895257029058077 0.08162862 0.14935464 prediction 0.606382474291533 Functional Gain - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25351210 chr4:25351214 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101736 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:25351205-25351238
64251 chr5 174955072 174955072 1 + C A rs186202668 174955068 + 174955048 174955088 41 TGAGAAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCT TGAGAAGCTGGGACTACAGGCGCCAGCCACCACGCCCGGCT < 41bp 0.461319500324426 0.803088586649878 0.3089403 0.38715044 prediction 0.606177173299757 Functional Gain - SFXN1 ENSG00000164466 UTR3 Human protein_coding chr5:174955068 chr5:174955072 . . 0 25 hm5C_associated_SNPs_101740 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:174955045-174955078
64251 chr4 77231134 77231134 1 + C A HNSC 77231130 + 77231110 77231150 41 GCCATGAGGATAAAGTGGTTCACGCATGGTGGGGGATTCAC GCCATGAGGATAAAGTGGTTCACGAATGGTGGGGGATTCAC < 41bp 0.420197364438934 0.803078394849568 0.06396827 0.089782685 prediction 0.606156789699135 Functional Gain - STBD1 ENSG00000118804 CDS Human protein_coding chr4:77231130 chr4:77231134 nonsynonymous SNV 0.020 1 25 hm5C_associated_SNPs_101741 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:77231089-77231137
64251 chr17 40705565 40705565 1 + C A UCEC 40705561 + 40705541 40705581 41 TAGGGACTGTGCGGATGCTGCAGGCCTTCCTGCCAGACATG TAGGGACTGTGCGGATGCTGCAGGACTTCCTGCCAGACATG < 41bp 0.586727912188422 0.889690854120645 0.86238337 0.86788595 prediction 0.605925883864445 Functional Gain - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705561 chr17:40705565 nonsynonymous SNV 0.960 2 25 hm5C_associated_SNPs_101749 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr17:40705545-40705574
64251 chr16 23700989 23700989 1 + T A SKCM 23700985 + 23700965 23701005 41 AGCAACGGCAGCGTGCAGATCAACTTCTTCCAGGTGAGCTG AGCAACGGCAGCGTGCAGATCAACATCTTCCAGGTGAGCTG < 41bp 0.488471541002678 0.802867808155709 0.041276872 0.066633314 prediction 0.605735616311418 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700985 chr16:23700989 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101755 0 0 4 GRWD1 POSTAR2 ENCODE chr16:23700956-23700994
64251 chr17 42266554 42266554 1 + T G LUAD 42266552 + 42266532 42266572 41 GACAGCGGTAGCAACCAGCTCCTGGGCGCTATTGTGTCAGC GACAGCGGTAGCAACCAGCTCCGGGGCGCTATTGTGTCAGC < 41bp 0.46892074644266 0.802810408124591 0.0979099 0.51131177 prediction 0.605620816249182 Functional Gain - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42266552 chr17:42266554 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_101759 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42266542-42266571
64251 chr6 26252190 26252190 1 + T G rs201943873 26252188 + 26252168 26252208 41 CAGCCGTGCGCCTGCTGCTGCCTGGGGAACTGGCCAAGCAC CAGCCGTGCGCCTGCTGCTGCCGGGGGAACTGGCCAAGCAC < 41bp 0.515386991544502 0.818188258056373 0.83791345 0.92724764 prediction 0.605602533023742 Functional Gain - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252188 chr6:26252190 synonymous SNV . 0 23 hm5C_associated_SNPs_101760 0 0 4 GRWD1 POSTAR2 ENCODE chr6:26252079-26252274
64251 chr12 53676948 53676948 1 + C A UCEC 53676944 + 53676924 53676964 41 CCTGAGATAGCTCTCATAGACTCCCATAAGCTCCTCCGAAG CCTGAGATAGCTCTCATAGACTCCAATAAGCTCCTCCGAAG < 41bp 0.375888408294808 0.802765564156247 0.15150014 0.9569529 prediction 0.605531128312495 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53676944 chr12:53676948 nonsynonymous SNV 0.747 4 25 hm5C_associated_SNPs_101762 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr12:53676933-53676953
64251 chr10 1205810 1205810 1 + C A rs4880778 1205806 + 1205786 1205826 41 GCCGGCGCAGGCCTGCGCGCCACGCGCTTTAGGTGGATGAG GCCGGCGCAGGCCTGCGCGCCACGAGCTTTAGGTGGATGAG < 41bp 0.481079840693281 0.802737461316912 0.1442503 0.17300555 prediction 0.605474922633825 Functional Gain - LINC00200 ENSG00000229205 ncRNA_exonic Human lincRNA chr10:1205806 chr10:1205810 . . 0 25 hm5C_associated_SNPs_101763 0 0 1 DDX3X POSTAR2 ENCODE chr10:1205790-1205864
64251 chr6 144508185 144508185 1 + C A HNSC 144508181 + 144508161 144508201 41 AACGCGCTCACCCTCACCTTCCAGCGCGCCATGCACGACTA AACGCGCTCACCCTCACCTTCCAGAGCGCCATGCACGACTA < 41bp 0.424921438797961 0.802720154658803 0.3903378 0.573859 prediction 0.605440309317606 Functional Gain - STX11 ENSG00000135604 CDS Human protein_coding chr6:144508181 chr6:144508185 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_101765 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:144508166-144508193
64251 chr8 106331179 106331179 1 + C A COAD 106331175 + 106331155 106331195 41 GCAGCCGCCGCCGAGATGTCCCGGCGAAAGCAAAGCAAACC GCAGCCGCCGCCGAGATGTCCCGGAGAAAGCAAAGCAAACC < 41bp 0.528723941010062 0.831399971699081 0.8912704 0.8843546 prediction 0.605352061378038 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106331175 chr8:106331179 synonymous SNV . 0 25 hm5C_associated_SNPs_101770 0 0 1 SRSF1 POSTAR2 ENCODE chr8:106331099-106331180
64251 chr6 36181922 36181922 1 + C A UCEC 36181918 + 36181898 36181938 41 CCTCATGGCCCCTGACACCCCGGCCGGTACCCCACTTAGTG CCTCATGGCCCCTGACACCCCGGCAGGTACCCCACTTAGTG < 41bp 0.403963493606021 0.802619782493233 0.25863093 0.25654304 prediction 0.605239564986466 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36181918 chr6:36181922 synonymous SNV . 0 25 hm5C_associated_SNPs_101773 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:36181921-36181922
64251 chr7 33296936 33296936 1 + C A rs113518488 33296932 + 33296912 33296952 41 TGCTTTTGGAAGATTTCTCCCTGGCTTTCTTCTGCCTGGTC TGCTTTTGGAAGATTTCTCCCTGGATTTCTTCTGCCTGGTC < 41bp 0.453225792246537 0.802590157005707 0.4365564 0.8421029 prediction 0.605180314011413 Functional Gain - BBS9 ENSG00000122507 CDS Human protein_coding chr7:33296932 chr7:33296936 synonymous SNV . 0 25 hm5C_associated_SNPs_101775 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:33296923-33296976
64251 chr15 75188576 75188576 1 + T A rs543652740 75188572 + 75188552 75188592 41 CAGTACCCAGGTGATATCGGCTGCTTTGCCATCTACTTCCT CAGTACCCAGGTGATATCGGCTGCATTGCCATCTACTTCCT < 41bp 0.481380822105095 0.802544185415132 0.26142728 0.21314755 prediction 0.605088370830263 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75188572 chr15:75188576 nonsynonymous SNV 0.991 2 25 hm5C_associated_SNPs_101777 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr15:75188564-75188591
64251 chr14 76107313 76107313 1 + C A BLCA 76107309 + 76107289 76107329 41 GGTCTTCAGCTTCTTTATGACTGGCTATCTCCCACTGGGAT GGTCTTCAGCTTCTTTATGACTGGATATCTCCCACTGGGAT < 41bp 0.409869256576335 0.802501781735519 0.45300508 0.4519934 prediction 0.605003563471039 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76107309 chr14:76107313 synonymous SNV . 0 25 hm5C_associated_SNPs_101779 0 0 1 BUD13 POSTAR2 ENCODE chr14:76107232-76107313
64251 chr17 80011178 80011178 1 + T G COAD 80011176 + 80011156 80011196 41 GTGGAGCCCATGCAGATCGACGTGGACCCCCAGGAAGACCC GTGGAGCCCATGCAGATCGACGGGGACCCCCAGGAAGACCC < 41bp 0.554563702394916 0.857026415787018 0.61205417 0.90091026 prediction 0.604925426784203 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80011176 chr17:80011178 nonsynonymous SNV 0.992 1 23 hm5C_associated_SNPs_101782 0 0 20 DDX3X POSTAR2 GSE70804,GSM1819214 chr17:80011140-80011180
64251 chr9 133573588 133573588 1 + C A rs201749338 133573584 + 133573564 133573604 41 TGGAAGGTGGAGACCAACTCCAGGCTGGATTCGGTCTTGCT TGGAAGGTGGAGACCAACTCCAGGATGGATTCGGTCTTGCT < 41bp 0.593293874642969 0.895700148820595 0.9080777 0.85940933 prediction 0.604812548355252 Functional Gain - EXOSC2 ENSG00000130713 CDS Human protein_coding chr9:133573584 chr9:133573588 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_101785 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:133573578-133573620
64251 chr1 900972 900972 1 + T G rs9697711 900969 + 900949 900989 41 GTCCCGGGAAGGGTGGGGAGCAGTTGTCCTTCCTGTCGTCG GTCCCGGGAAGGGTGGGGAGCAGGTGTCCTTCCTGTCGTCG < 41bp 0.514458533695012 0.816847008543482 0.3285616 0.88639665 prediction 0.604776949696939 Functional Gain - KLHL17 ENSG00000187961 UTR3 Human protein_coding chr1:900969 chr1:900972 . . 0 24 hm5C_associated_SNPs_101788 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:900971-900972
64251 chr16 56920913 56920913 1 + C A LUAD 56920909 + 56920889 56920929 41 GAGCTCCAGCTCATCGCCAACGGGCACACCAAGTGGCTGAA GAGCTCCAGCTCATCGCCAACGGGAACACCAAGTGGCTGAA < 41bp 0.400784462855737 0.802375205934172 0.8948134 0.90785766 prediction 0.604750411868345 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56920909 chr16:56920913 nonsynonymous SNV 0.399 2 25 hm5C_associated_SNPs_101790 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr16:56920900-56920920
64251 chr6 99283457 99283457 1 + C A LUAD 99283453 + 99283433 99283473 41 CCCGCACCCGCACTCGCACCCACACCAGCAGCCGCCGCCCC CCCGCACCCGCACTCGCACCCACAACAGCAGCCGCCGCCCC < 41bp 0.581116594155119 0.883485029600271 0.10201895 0.19809586 prediction 0.604736870890304 Functional Gain - POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283453 chr6:99283457 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_101791 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:99283456-99283457
64251 chr11 122774974 122774974 1 + T G SKCM 122774972 + 122774952 122774992 41 TCGAGCAGCCTTTCTCCGTACGTGAAGAGCTCAAGTTCACA TCGAGCAGCCTTTCTCCGTACGGGAAGAGCTCAAGTTCACA < 41bp 0.543502757815017 0.845801432706919 0.15320891 0.30671775 prediction 0.604597349783804 Functional Gain - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122774972 chr11:122774974 nonsynonymous SNV 0.027 0 23 hm5C_associated_SNPs_101793 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:122774960-122774980
64251 chr5 139554722 139554722 1 + C A rs562440189 139554718 + 139554698 139554738 41 TTGCCAGGGTGATCAGGTGACTCCCGGTTCGCGGCGCTGGG TTGCCAGGGTGATCAGGTGACTCCAGGTTCGCGGCGCTGGG < 41bp 0.581813363204196 0.884050363032007 0.6911372 0.9289433 prediction 0.60447399965562 Functional Gain - CYSTM1 ENSG00000120306 UTR5 Human protein_coding chr5:139554718 chr5:139554722 . . 0 25 hm5C_associated_SNPs_101798 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:139554720-139554740
64251 chr12 124497330 124497330 1 + C A LUSC 124497326 + 124497306 124497346 41 GAAGGCCTTCAGTCAGAGTTCGAGCCTGTGCATCCACCAGA GAAGGCCTTCAGTCAGAGTTCGAGACTGTGCATCCACCAGA < 41bp 0.434323866381171 0.802232418498077 0.4339319 0.5282291 prediction 0.604464836996154 Functional Gain - ZNF664 ENSG00000179195 CDS Human protein_coding chr12:124497326 chr12:124497330 nonsynonymous SNV 0.940 1 25 hm5C_associated_SNPs_101799 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:124497211-124497349
64251 chr20 308923 308923 1 + C A rs6050226 308919 + 308899 308939 41 TCTGCCCCGCCCCGCCCCTCCGGCCTCCCCACACCCCCCTT TCTGCCCCGCCCCGCCCCTCCGGCATCCCCACACCCCCCTT < 41bp 0.570593292553777 0.87276138813061 0.34046793 0.29467303 prediction 0.604336191153667 Functional Gain - SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:308919 chr20:308923 . . 0 25 hm5C_associated_SNPs_101805 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:308920-308960
64251 chr13 113798336 113798336 1 + C A UCEC 113798332 + 113798312 113798352 41 TGCTTGACTTCAACCAGACGCAGCCTGAGAGGGGCGACAAC TGCTTGACTTCAACCAGACGCAGCATGAGAGGGGCGACAAC < 41bp 0.399153036169156 0.802154198872404 0.0057125688 0.019113928 prediction 0.604308397744809 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113798332 chr13:113798336 nonsynonymous SNV 0.008 2 25 hm5C_associated_SNPs_101807 0 0 2 RPS3 POSTAR2 ENCODE chr13:113798301-113798342
64251 chr12 14927825 14927825 1 + C A rs6645 14927821 + 14927801 14927841 41 CGCCGCCCTCAGGGAGCTGGCTCCCCCAGCAAAGGCCCTTT CGCCGCCCTCAGGGAGCTGGCTCCACCAGCAAAGGCCCTTT < 41bp 0.584523954343703 0.88665508620607 0.11528745 0.85257256 prediction 0.604262263724736 Functional Gain - H2AFJ ENSG00000246705 UTR3 Human protein_coding chr12:14927821 chr12:14927825 . . 0 25 hm5C_associated_SNPs_101808 0 0 2 LARP4 POSTAR2 ENCODE chr12:14927756-14927853
64251 chr22 50312459 50312459 1 + T G rs562220912 50312457 + 50312437 50312477 41 CCGCGCTGGGGCTCCTGCCGCTTCTGCTGCTGCTGCCGCCC CCGCGCTGGGGCTCCTGCCGCTGCTGCTGCTGCTGCCGCCC < 41bp 0.522183147327775 0.824300265826541 0.33667374 0.7595429 prediction 0.604234236997531 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50312457 chr22:50312459 synonymous SNV . 0 23 hm5C_associated_SNPs_101810 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr22:50312458-50312459
64251 chr1 150484990 150484990 1 + C A LUAD 150484986 + 150484966 150485006 41 GACATCTTGACCATTGACATCGGTCGAGTCACCCCCAACCT GACATCTTGACCATTGACATCGGTAGAGTCACCCCCAACCT < 41bp 0.40120857463668 0.801976577495502 0.6244641 0.8332801 prediction 0.603953154991004 Functional Gain - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484986 chr1:150484990 synonymous SNV . 0 25 hm5C_associated_SNPs_101820 0 0 2 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr3 38038580 38038580 1 + T A GBM 38038576 + 38038556 38038596 41 TGGCTCTGGCAGGTGGAGCTCTCCTGGAACAGCTTTAATAA TGGCTCTGGCAGGTGGAGCTCTCCAGGAACAGCTTTAATAA < 41bp 0.472081174195229 0.801942090310733 0.4208913 0.952042 prediction 0.603884180621467 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38038576 chr3:38038580 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_101822 0 0 1 BUD13 POSTAR2 ENCODE chr3:38038552-38038592
64251 chr14 37641838 37641838 1 - A C rs111430783 37641841 - 37641821 37641861 41 AGACAAAGCCTGAGCCGCTGCGGTGAGCCAACCCAAACCCA AGACAAAGCCTGAGCCGCTGCGGGGAGCCAACCCAAACCCA < 41bp 0.537428798829581 0.839321963121165 0.35025018 0.8569931 prediction 0.603786328583167 Functional Gain - SLC25A21-AS1 ENSG00000258708 CDS Human antisense chr14:37641841 chr14:37641838 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_101825 0 0 1 DDX3X POSTAR2 ENCODE chr14:37641739-37641852
64251 chr16 67911537 67911537 1 + T G SKCM 67911534 + 67911514 67911554 41 CTGTGAGGAGAGCAGCCCAACAGTGGCCCTGCTGCATGAAG CTGTGAGGAGAGCAGCCCAACAGGGGCCCTGCTGCATGAAG < 41bp 0.467162146486532 0.80186150643588 0.20403641 0.83609474 prediction 0.603723012871759 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67911534 chr16:67911537 nonsynonymous SNV 0.976 2 24 hm5C_associated_SNPs_101827 0 0 11 BUD13 POSTAR2 ENCODE chr16:67911491-67911564
64251 chr2 105858680 105858680 1 + T G KIRP 105858678 + 105858658 105858698 41 TGGTTTTTTGTCCTGGAGGGCGTGGCCATCCTGCTCATCAT TGGTTTTTTGTCCTGGAGGGCGGGGCCATCCTGCTCATCAT < 41bp 0.54226123290325 0.844062752190839 0.27911204 0.8592419 prediction 0.603603038575179 Functional Gain - GPR45 ENSG00000135973 CDS Human protein_coding chr2:105858678 chr2:105858680 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_101830 0 0 1 TNRC6A POSTAR2 GSE21578,GSM545218 chr2:105858680-105858700
64251 chr20 377140 377140 1 + C A UCEC 377136 + 377116 377156 41 CCTGCCCGCTGTCTGGTTCGCTGCCTCCTTCGTCGGGAGCC CCTGCCCGCTGTCTGGTTCGCTGCATCCTTCGTCGGGAGCC < 41bp 0.410645565616903 0.801790634728501 0.36169222 0.37481415 prediction 0.603581269457002 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377136 chr20:377140 nonsynonymous SNV 0.970 1 25 hm5C_associated_SNPs_101833 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:377128-377140
64251 chr1 150459936 150459936 1 + T G SKCM 150459933 + 150459913 150459953 41 TGGTGTGAAGGAACATGGCCCTGTATCAGAGGTGGCGGTGT TGGTGTGAAGGAACATGGCCCTGGATCAGAGGTGGCGGTGT < 41bp 0.43400031244019 0.801725228266147 0.02292177 0.09990564 prediction 0.603450456532294 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150459933 chr1:150459936 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_101836 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:150459899-150459941
64251 chr1 43825014 43825014 1 + T A BLCA 43825010 + 43824990 43825030 41 CCGCAGGCCCGGCCCCCTCACCCATGCGGGCCGCCAACCGA CCGCAGGCCCGGCCCCCTCACCCAAGCGGGCCGCCAACCGA < 41bp 0.500258491781076 0.801890959844648 0.110756546 0.086859554 prediction 0.603264936127144 Functional Gain - CDC20 ENSG00000117399 CDS Human protein_coding chr1:43825010 chr1:43825014 nonsynonymous SNV 0.920 1 25 hm5C_associated_SNPs_101842 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:43825007-43825021
64251 chr7 75615047 75615047 1 + C A CESC 75615043 + 75615023 75615063 41 CGTGCGCTGGTGCCCATGTTCGTGCGCAAGTCCCAGTTCCG CGTGCGCTGGTGCCCATGTTCGTGAGCAAGTCCCAGTTCCG < 41bp 0.585233027040657 0.886792886154627 0.90881497 0.90987736 prediction 0.603119718227939 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75615043 chr7:75615047 nonsynonymous SNV 0.997 5 25 hm5C_associated_SNPs_101845 0 0 3 FMR1 POSTAR2 ENCODE chr7:75615043-75615096
64251 chr15 96875642 96875642 1 + T G HNSC 96875640 + 96875620 96875660 41 TGCGAGGGCTGCAAGAGCTTCTTCAAGCGCAGCGTGCGGAG TGCGAGGGCTGCAAGAGCTTCTGCAAGCGCAGCGTGCGGAG < 41bp 0.507390535183192 0.808945441652621 0.6656315 0.5555652 prediction 0.603109812938858 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875640 chr15:96875642 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_101846 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:96875613-96875643
64251 chr1 114524684 114524684 1 + T G rs541644206 114524681 + 114524661 114524701 41 CCCCAGACCCAGGGCTCTAACCTTGTATGCGGGCAGGCCCA CCCCAGACCCAGGGCTCTAACCTGGTATGCGGGCAGGCCCA < 41bp 0.452769113654689 0.801533374213289 0.7232842 0.9054709 prediction 0.603066748426578 Functional Gain - OLFML3 ENSG00000116774 UTR3 Human protein_coding chr1:114524681 chr1:114524684 . . 0 24 hm5C_associated_SNPs_101847 0 0 1 LARP4 POSTAR2 ENCODE chr1:114524573-114524707
64251 chr6 26204962 26204962 1 + T G UCEC 26204959 + 26204939 26204979 41 CTGCGAGATAACATCCAGGGCATTACCAAGCCTGCCATCCG CTGCGAGATAACATCCAGGGCATGACCAAGCCTGCCATCCG < 41bp 0.445774620080919 0.801504052904941 0.13140401 0.15478697 prediction 0.603008105809883 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26204959 chr6:26204962 nonsynonymous SNV 0.222 0 24 hm5C_associated_SNPs_101850 0 0 32 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26204945-26204972
64251 chr14 62249051 62249051 1 + T A GBM 62249047 + 62249027 62249067 41 TGGTCAAGGGCAAGTCAAAGCAACTAGGAAAAAAGAGAAGA TGGTCAAGGGCAAGTCAAAGCAACAAGGAAAAAAGAGAAGA < 41bp 0.50273716876159 0.804233413827739 0.38487887 0.35646656 prediction 0.602992490132299 Functional Gain - SNAPC1 ENSG00000023608 CDS Human protein_coding chr14:62249047 chr14:62249051 synonymous SNV . 0 25 hm5C_associated_SNPs_101851 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:62249029-62249053
64251 chr12 27933782 27933782 1 + C A COAD 27933778 + 27933758 27933798 41 GTTCCACCTCCTGGGGTCTCCTCCCCAAGCTCCAGGGGATG GTTCCACCTCCTGGGGTCTCCTCCACAAGCTCCAGGGGATG < 41bp 0.396911584677301 0.801496236446138 0.41438168 0.9468764 prediction 0.602992472892275 Functional Gain - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933778 chr12:27933782 synonymous SNV . 0 25 hm5C_associated_SNPs_101852 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:27933758-27933786
64251 chr10 75520505 75520505 1 + T A LUSC 75520501 + 75520481 75520521 41 ACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGCCCCTACC ACCAGCCCGGGGCCCTCAGTCTAAATATGGAGGCCCCTACC < 41bp 0.512324077832067 0.813784705578374 0.23585904 0.26859063 prediction 0.602921255492615 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520501 chr10:75520505 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_101854 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:75520499-75520524
64251 chr6 18218071 18218071 1 + T G LGG 18218068 + 18218048 18218088 41 GGTGGAAGTGGGGAGGCCTACGATATCATTGCTGAAGACAT GGTGGAAGTGGGGAGGCCTACGAGATCATTGCTGAAGACAT < 41bp 0.569262740638646 0.870691605184242 0.3408025 0.8375282 prediction 0.602857729091193 Functional Gain - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18218068 chr6:18218071 nonsynonymous SNV 0.770 3 24 hm5C_associated_SNPs_101855 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:18218069-18218093
64251 chr10 38739351 38739351 1 + C A rs539684289 38739347 + 38739327 38739367 41 TCACACCGGCCCCTCCCACGCTGACAGGTCAGCCTCAGCTC TCACACCGGCCCCTCCCACGCTGAAAGGTCAGCCTCAGCTC < 41bp 0.450891840126708 0.80133120996381 0.05614406 0.1486345 prediction 0.60266241992762 Functional Gain - LINC00999 ENSG00000225119;ENSG00000228882 intergenic Human other chr10:38739347 chr10:38739351 . . 0 25 hm5C_associated_SNPs_101857 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:38739351-38739389
64251 chrX 24483405 24483405 1 + T G rs7891330 24483402 + 24483382 24483422 41 GGAAGCCGCGGGCGGCCCGCCGCTGTCCTGGAGCTGCTGCT GGAAGCCGCGGGCGGCCCGCCGCGGTCCTGGAGCTGCTGCT < 41bp 0.54223620946368 0.843559897396235 0.100735635 0.74152935 prediction 0.602647375865109 Functional Gain - PDK3 ENSG00000067992 UTR5 Human protein_coding chrX:24483402 chrX:24483405 . . 0 24 hm5C_associated_SNPs_101859 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:24483400-24483420
64251 chr2 74683252 74683252 1 + C A STAD 74683248 + 74683228 74683268 41 AGATGAAGACAGTAATCTCTCTCCCTCTCCACTTCGGGACC AGATGAAGACAGTAATCTCTCTCCATCTCCACTTCGGGACC < 41bp 0.376497501345598 0.801257064057515 0.08063677 0.92458475 prediction 0.602514128115031 Functional Gain - INO80B ENSG00000115274 CDS Human protein_coding chr2:74683248 chr2:74683252 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_101863 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74683235-74683263
64251 chr17 40665988 40665988 1 + C A LUSC 40665984 + 40665964 40666004 41 TGCGGCTCTGGGCCCTCAGCCTCGCTCATGCGCGTGAGTAC TGCGGCTCTGGGCCCTCAGCCTCGATCATGCGCGTGAGTAC < 41bp 0.602923312358845 0.904157952929378 0.024313658 0.048261136 prediction 0.602469281141066 Functional Gain - ATP6V0A1 ENSG00000033627 CDS Human protein_coding chr17:40665984 chr17:40665988 nonsynonymous SNV 0.297 5 25 hm5C_associated_SNPs_101867 0 0 5 BUD13 POSTAR2 ENCODE chr17:40665927-40665993
64251 chr5 72424284 72424284 1 + C A rs75514270 72424280 + 72424260 72424300 41 TCCTGAATCTTCAGCTTCTGCGGTCGCTGAGAGTCCTGGAA TCCTGAATCTTCAGCTTCTGCGGTAGCTGAGAGTCCTGGAA < 41bp 0.406205053816401 0.801227153653247 0.31390792 0.4985113 prediction 0.602454307306495 Functional Gain - TMEM171 ENSG00000157111 CDS Human protein_coding chr5:72424280 chr5:72424284 synonymous SNV . 0 25 hm5C_associated_SNPs_101868 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:72424264-72424301
64251 chr19 4323207 4323207 1 + C A LGG 4323203 + 4323183 4323223 41 CTGGACGCCCCCGTGCCCGACTGCCTGGGTGTGCACTGTGA CTGGACGCCCCCGTGCCCGACTGCATGGGTGTGCACTGTGA < 41bp 0.387265789417419 0.80110737852579 0.09416294 0.8323465 prediction 0.60221475705158 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4323203 chr19:4323207 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_101873 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:4323203-4323241
64251 chr13 34404130 34404130 1 + T G STAD 34404128 + 34404108 34404148 41 GTAGTAGGTGCTTGGCGGTTCGTGTGCCTGCTCCCAGCATT GTAGTAGGTGCTTGGCGGTTCGGGTGCCTGCTCCCAGCATT < 41bp 0.476133381398654 0.80103331257457 0.15432301 0.57030475 prediction 0.60206662514914 Functional Gain - RFC3 ENSG00000133119 CDS Human protein_coding chr13:34404128 chr13:34404130 synonymous SNV . 0 23 hm5C_associated_SNPs_101877 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr13:34404096-34404144
64251 chr4 1803734 1803734 1 + C A COAD 1803730 + 1803710 1803750 41 CAAGGTGGGCCCGGACGGCACACCCTACGTTACCGTGCTCA CAAGGTGGGCCCGGACGGCACACCATACGTTACCGTGCTCA < 41bp 0.406367323718621 0.800950760711968 0.0574041 0.18705136 prediction 0.601901521423936 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1803730 chr4:1803734 synonymous SNV . 0 25 hm5C_associated_SNPs_101882 0 0 3 PPIG POSTAR2 ENCODE chr4:1803698-1803735
64251 chr18 14179589 14179589 1 + C A LGG 14179585 + 14179565 14179605 41 GGAGACCTTGACGCCCTGGACAAGCAGCACAGGTAGCGAGG GGAGACCTTGACGCCCTGGACAAGAAGCACAGGTAGCGAGG < 41bp 0.543891469655081 0.844831295795553 0.12887874 0.1922473 prediction 0.601879652280945 Functional Gain - ANKRD20A5P ENSG00000186481 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr18:14179585 chr18:14179589 . . 0 25 hm5C_associated_SNPs_101884 0 0 4 PPIG POSTAR2 ENCODE chr18:14179534-14179594
64251 chr1 11897082 11897082 1 + C A rs41275500 11897078 + 11897058 11897098 41 ATCCAGCATCCTCACCCGGGCTGGCGAGCAGCGCAAACGGA ATCCAGCATCCTCACCCGGGCTGGAGAGCAGCGCAAACGGA < 41bp 0.406974965046934 0.800928220447683 0.07748151 0.122237206 prediction 0.601856440895367 Functional Gain - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11897078 chr1:11897082 synonymous SNV . 0 25 hm5C_associated_SNPs_101886 0 0 3 BUD13 POSTAR2 ENCODE chr1:11897026-11897100
64251 chr19 36250358 36250358 1 + C A OV 36250354 + 36250334 36250374 41 ACTACTGGCCATCCCAGAGCCAGACCTGGTGTCCCAAGGTG ACTACTGGCCATCCCAGAGCCAGAACTGGTGTCCCAAGGTG < 41bp 0.400988358581707 0.800869620844254 0.28909752 0.86823124 prediction 0.601739241688507 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36250354 chr19:36250358 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_101890 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:36250328-36250369
64251 chr16 85694968 85694968 1 + C A rs116863796 85694964 + 85694944 85694984 41 ATTTGAGCCCAGCCGCCAGGCAGCCGTGCCGCTGGTGAAGG ATTTGAGCCCAGCCGCCAGGCAGCAGTGCCGCTGGTGAAGG < 41bp 0.393892618241229 0.800802239410125 0.14543182 0.16997758 prediction 0.601604478820249 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85694964 chr16:85694968 synonymous SNV . 0 25 hm5C_associated_SNPs_101893 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:85694968-85694969
64251 chr8 128750683 128750683 1 + C A LUAD 128750679 + 128750659 128750699 41 AAGAAATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAG AAGAAATTCGAGCTGCTGCCCACCACGCCCCTGTCCCCTAG < 41bp 0.601143161392159 0.90190618973751 0.017084837 0.012917578 prediction 0.601526056690702 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128750679 chr8:128750683 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_101896 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:128750650-128750684
64251 chr15 29346705 29346705 1 + C A rs111870710 29346701 + 29346681 29346721 41 CGAGGAGGCCAACGGGAACACCGGCGCCTCCCCCTACCGCC CGAGGAGGCCAACGGGAACACCGGAGCCTCCCCCTACCGCC < 41bp 0.58845143047463 0.889073745919805 0.79417163 0.86584914 prediction 0.601244630890352 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346701 chr15:29346705 synonymous SNV . 0 25 hm5C_associated_SNPs_101905 0 0 1 FMR1 POSTAR2 ENCODE chr15:29346684-29346763
64251 chr2 176987785 176987785 1 + C A LUAD 176987781 + 176987761 176987801 41 GCGGCGGCGATGAGCGGCCTCTACCACCCGTACGTTCCCCC GCGGCGGCGATGAGCGGCCTCTACAACCCGTACGTTCCCCC < 41bp 0.582543195151319 0.883127360933461 0.18901238 0.74308103 prediction 0.601168331564283 Functional Gain - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176987781 chr2:176987785 nonsynonymous SNV 0.746 3 25 hm5C_associated_SNPs_101908 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:176987780-176987800
64251 chr19 10224481 10224481 1 + C A UCEC 10224477 + 10224457 10224497 41 GAAGCAGCGCCCATGGCACCCCGCCGTGGTCTTCTCTGTCC GAAGCAGCGCCCATGGCACCCCGCAGTGGTCTTCTCTGTCC < 41bp 0.579658508471434 0.880113810367841 0.25722086 0.3176322 prediction 0.600910603792813 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224477 chr19:10224481 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_101912 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:10224425-10224485
64251 chr17 6025368 6025368 1 + C A rs186790130 6025364 + 6025344 6025384 41 AGGCCTAGGATAACCCTGGCCAGGCCCCATGGTCCTGCTCT AGGCCTAGGATAACCCTGGCCAGGACCCATGGTCCTGCTCT < 41bp 0.456512680291674 0.800400059487382 0.2834165 0.62746537 prediction 0.600800118974764 Functional Gain - WSCD1 ENSG00000179314 UTR3 Human protein_coding chr17:6025364 chr17:6025368 . . 0 25 hm5C_associated_SNPs_101919 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:6025331-6025371
64251 chr1 240371067 240371067 1 + C A LGG 240371063 + 240371043 240371083 41 TCCACCCCCTCTACCCGGAGCGGGCATACCCCCTCCTCCCC TCCACCCCCTCTACCCGGAGCGGGAATACCCCCTCCTCCCC < 41bp 0.446979857805613 0.800395325310135 0.7997216 0.849379 prediction 0.60079065062027 Functional Gain - FMN2 ENSG00000155816 CDS Human protein_coding chr1:240371063 chr1:240371067 synonymous SNV . 0 25 hm5C_associated_SNPs_101920 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:240371060-240371080
64251 chr2 103014302 103014302 1 + T G rs1135354 103014299 + 103014279 103014319 41 CCTGAGTTTGCTACTTACTTCTGTGGCCTCTGGAACCTTAT CCTGAGTTTGCTACTTACTTCTGGGGCCTCTGGAACCTTAT < 41bp 0.55492460316672 0.855284026039181 0.25004536 0.6966354 prediction 0.600718845744922 Functional Gain - IL18R1 ENSG00000115604 UTR3 Human protein_coding chr2:103014299 chr2:103014302 . . 0 24 hm5C_associated_SNPs_101923 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:103014297-103014339
64251 chr19 17887482 17887482 1 + C G HNSC 17887481 + 17887461 17887501 41 CCCCAGAGACCTCGGTCTGCCCCCAGAACCAGCAGGTGGGT CCCCAGAGACCTCGGTCTGCCGCCAGAACCAGCAGGTGGGT < 41bp 0.502685533567663 0.803004482928449 0.010017723 0.24726415 prediction 0.600637898721572 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17887481 chr19:17887482 nonsynonymous SNV 0.397 0 22 hm5C_associated_SNPs_101927 0 0 1 SF3B4 POSTAR2 ENCODE chr19:17887388-17887504
64251 chr14 95030149 95030149 1 + C G ACC 95030148 + 95030128 95030168 41 GGGCCTGGGCTTCAACCTCACCGAGCTGTCTGAGTCCGATG GGGCCTGGGCTTCAACCTCACGGAGCTGTCTGAGTCCGATG < 41bp 0.496838521798409 0.800202876578206 0.029883206 0.7851915 prediction 0.600405753156413 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030148 chr14:95030149 synonymous SNV . 0 22 hm5C_associated_SNPs_101934 0 0 2 RPS3 POSTAR2 ENCODE chr14:95030108-95030217
64251 chr10 124895758 124895758 1 + C A rs558356019 124895754 + 124895734 124895774 41 CGCGCCAGCCTCGGCTGCCGCCGCCGCCGCCGCTGCCGCTG CGCGCCAGCCTCGGCTGCCGCCGCAGCCGCCGCTGCCGCTG < 41bp 0.570909398366422 0.871107988649842 0.8597481 0.8269839 prediction 0.60039718056684 Functional Gain - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124895754 chr10:124895758 synonymous SNV . 0 25 hm5C_associated_SNPs_101936 0 0 1 GEMIN5 POSTAR2 ENCODE chr10:124895744-124895767
64251 chr8 33357916 33357916 1 + T G rs370105252 33357913 + 33357893 33357933 41 TGGCCTCCTGTAGCAGGGCGCTCTTAACAGACTCAGGTGTA TGGCCTCCTGTAGCAGGGCGCTCGTAACAGACTCAGGTGTA < 41bp 0.527671928909291 0.82785598690592 0.37810272 0.5578293 prediction 0.600368115993258 Functional Gain - TTI2 ENSG00000129696 CDS Human protein_coding chr8:33357913 chr8:33357916 nonsynonymous SNV 0.120 3 24 hm5C_associated_SNPs_101939 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:33357862-33357916
64251 chr11 74716855 74716855 1 + T A LUSC 74716851 + 74716831 74716871 41 GTAAAACCAGGCCTCATTCTCTGATGATCTACAGTGATGAC GTAAAACCAGGCCTCATTCTCTGAAGATCTACAGTGATGAC < 41bp 0.508201855458387 0.80835628556542 0.41295037 0.23076272 prediction 0.600308860214065 Functional Gain - NEU3 ENSG00000162139 CDS Human protein_coding chr11:74716851 chr11:74716855 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_101940 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:74716834-74716910
64251 chr14 52456295 52456295 1 + C A rs140907299 52456291 + 52456271 52456311 41 CGCGTCGCCGGTGCCTGCGCCTCCCGCTCCACCTCGCTTCT CGCGTCGCCGGTGCCTGCGCCTCCAGCTCCACCTCGCTTCT < 41bp 0.466554715941355 0.800139351426044 0.11669159 0.9584272 prediction 0.600278702852088 Functional Gain - C14orf166 ENSG00000087302 UTR5 Human protein_coding chr14:52456291 chr14:52456295 . . 0 25 hm5C_associated_SNPs_101941 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:52456274-52456324
64251 chr19 49464818 49464818 1 + C A OV 49464814 + 49464794 49464834 41 CCTCCTCTCCTACTTTGGGACGCCCACGTGGCAGACCGTGA CCTCCTCTCCTACTTTGGGACGCCAACGTGGCAGACCGTGA < 41bp 0.404806200122063 0.800081032016726 0.08776918 0.46302783 prediction 0.600162064033452 Functional Gain - BAX ENSG00000087088 CDS Human protein_coding chr19:49464814 chr19:49464818 synonymous SNV . 0 25 hm5C_associated_SNPs_101945 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49464757-49464918
64251 chr6 42985044 42985044 1 + T G TGCT 42985041 + 42985021 42985061 41 GGTTACTGCTCTGGTGAAGACTATGAGACACTGCGTCAGAT GGTTACTGCTCTGGTGAAGACTAGGAGACACTGCGTCAGAT < 41bp 0.426020502536933 0.800034501409411 0.018059492 0.03334087 prediction 0.600069002818821 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42985041 chr6:42985044 stopgain 0.998 1 24 hm5C_associated_SNPs_101948 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:42984992-42985064
64251 chr4 42403086 42403086 1 + T G SKCM 42403084 + 42403064 42403104 41 ATCTTCATTGCGTTCATCATCCTGGGCTCTGTAGTGGCTAT ATCTTCATTGCGTTCATCATCCGGGGCTCTGTAGTGGCTAT < 41bp 0.478023116507522 0.800033975132693 0.784516 0.93501616 prediction 0.600067950265385 Functional Gain - SHISA3 ENSG00000178343 CDS Human protein_coding chr4:42403084 chr4:42403086 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_101949 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:42403078-42403102
64251 chr9 130965795 130965795 1 + C A rs61757224 130965791 + 130965771 130965811 41 GATCTCATCCCGCTGGTCAACCGGCTGCAAGACGCCTTCTC GATCTCATCCCGCTGGTCAACCGGATGCAAGACGCCTTCTC < 41bp 0.568512228233642 0.868465892439854 0.88620824 0.89875746 prediction 0.599907328412423 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130965791 chr9:130965795 nonsynonymous SNV 0.423 2 25 hm5C_associated_SNPs_101950 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:130965786-130965824
64251 chr1 154218817 154218817 1 + C A UCEC 154218813 + 154218793 154218833 41 CGAAGCAGACTGCCATATCACAGCCTGCTTCAGGGAACACA CGAAGCAGACTGCCATATCACAGCATGCTTCAGGGAACACA < 41bp 0.398983292037399 0.799905802554392 0.26617563 0.200762 prediction 0.599811605108785 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154218813 chr1:154218817 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_101953 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154218740-154218846
64251 chr20 60868982 60868982 1 + C A rs557223584 60868978 + 60868958 60868998 41 CTGGGGCCCGGGACCGGAGGCTGACGAGGCTGGACTTCCTC CTGGGGCCCGGGACCGGAGGCTGAAGAGGCTGGACTTCCTC < 41bp 0.583524300146858 0.883414297392955 0.76560354 0.83897394 prediction 0.599779994492193 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60868978 chr20:60868982 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_101954 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:60868961-60869001
64251 chr8 144102376 144102376 1 + T G LGG 144102373 + 144102353 144102393 41 CAGAATGAAGATCTTCTTGCCAGTGCTGCTGGCTGCCCTTC CAGAATGAAGATCTTCTTGCCAGGGCTGCTGGCTGCCCTTC < 41bp 0.58889067629657 0.888771147128228 0.16596463 0.9360623 prediction 0.599760941663316 Functional Gain - LY6E ENSG00000160932 CDS Human protein_coding chr8:144102373 chr8:144102376 nonsynonymous SNV 0.352 2 24 hm5C_associated_SNPs_101955 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:144102360-144102380
64251 chr10 131565232 131565232 1 + T G HNSC 131565230 + 131565210 131565250 41 GCTCAAGGGAGCGGGAGCTACCTCGGGCTCCCCGCCTGCTG GCTCAAGGGAGCGGGAGCTACCGCGGGCTCCCCGCCTGCTG < 41bp 0.524402334691335 0.824255983066166 0.78440416 0.9301288 prediction 0.599707296749663 Functional Gain - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565230 chr10:131565232 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_101957 0 0 6 GRSF1 POSTAR2 ENCODE chr10:131565158-131565252
64251 chr2 234357877 234357877 1 + C A OV 234357873 + 234357853 234357893 41 GGCTGAAGATGGAGATGGGTCGGGCAGCATCTGCGGTTCCA GGCTGAAGATGGAGATGGGTCGGGAAGCATCTGCGGTTCCA < 41bp 0.589008922487569 0.888838789179152 0.85314107 0.8695191 prediction 0.599659733383166 Functional Gain - DGKD ENSG00000077044 CDS Human protein_coding chr2:234357873 chr2:234357877 synonymous SNV . 0 25 hm5C_associated_SNPs_101959 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:234357866-234357883
64251 chr2 26609349 26609349 1 + T A LUSC 26609345 + 26609325 26609365 41 CCTCTTACGTTGAGAGCATTCTCCTGTATACATTAACAACT CCTCTTACGTTGAGAGCATTCTCCAGTATACATTAACAACT < 41bp 0.532477382246203 0.832269714087816 0.108522296 0.9350652 prediction 0.599584663683227 Functional Gain - SELENOI ENSG00000138018 CDS Human protein_coding chr2:26609345 chr2:26609349 unknown 0.684 4 25 hm5C_associated_SNPs_101964 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:26609340-26609377
64251 chr6 292235 292235 1 + C A rs572468628 292231 + 292211 292251 41 AGCGAGGAGGGACGCTGGGCCTGCCCGGTGCGCACGGGGGC AGCGAGGAGGGACGCTGGGCCTGCACGGTGCGCACGGGGGC < 41bp 0.545459937265909 0.845189278453014 0.23177323 0.22004357 prediction 0.599458682374209 Functional Gain - DUSP22 ENSG00000112679 UTR5 Human protein_coding chr6:292231 chr6:292235 . . 0 25 hm5C_associated_SNPs_101967 0 0 3 DDX3X POSTAR2 ENCODE chr6:292110-292252
64251 chr18 10550152 10550152 1 + C A LGG 10550148 + 10550128 10550168 41 TCACCTGCAACACCACAGGCCAAGCCTGATGGTGTCACTGC TCACCTGCAACACCACAGGCCAAGACTGATGGTGTCACTGC < 41bp 0.42691211499399 0.799716918692913 0.13056993 0.18880433 prediction 0.599433837385827 Functional Gain - NAPG ENSG00000134265 CDS Human protein_coding chr18:10550148 chr18:10550152 nonsynonymous SNV 0.209 0 25 hm5C_associated_SNPs_101968 0 0 1 ZNF622 POSTAR2 ENCODE chr18:10550140-10550186
64251 chr7 75614956 75614956 1 + C A SKCM 75614952 + 75614932 75614972 41 TGTGGAGTACGAGACCAAGGCTGGCCGCATCAACAAGGGCG TGTGGAGTACGAGACCAAGGCTGGACGCATCAACAAGGGCG < 41bp 0.596964105525187 0.89667411006057 0.5414859 0.7603035 prediction 0.599420009070766 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75614952 chr7:75614956 synonymous SNV . 0 25 hm5C_associated_SNPs_101970 0 0 2 RPS3 POSTAR2 ENCODE chr7:75614937-75614968
64251 chr15 90611125 90611125 1 + T G SKCM 90611122 + 90611102 90611142 41 GGCTTCGTGTGGCAGGAGGCCAGTGAGTTCGAGGCTGACAC GGCTTCGTGTGGCAGGAGGCCAGGGAGTTCGAGGCTGACAC < 41bp 0.40271201879305 0.799702702298543 0.8615839 0.9089273 prediction 0.599405404597086 Functional Gain - ZNF710 ENSG00000140548 CDS Human protein_coding chr15:90611122 chr15:90611125 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_101971 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:90611096-90611126
64251 chr9 33918035 33918035 1 + C A rs143815819 33918031 + 33918011 33918051 41 TTTTAAAGGCAGGGTTATTTCCCCCCAGGGAGTGGGGCAAG TTTTAAAGGCAGGGTTATTTCCCCACAGGGAGTGGGGCAAG < 41bp 0.415806985057305 0.799534297415073 0.15386721 0.16561323 prediction 0.599068594830146 Functional Gain - UBE2R2 ENSG00000107341 UTR3 Human protein_coding chr9:33918031 chr9:33918035 . . 0 25 hm5C_associated_SNPs_101976 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr9:33917984-33918086
64251 chr1 167992241 167992241 1 + T G SKCM 167992238 + 167992218 167992258 41 TGTTTCAGATTCTCCTTCTTCTGTGGTTAACAAACAGCTCG TGTTTCAGATTCTCCTTCTTCTGGGGTTAACAAACAGCTCG < 41bp 0.439973956921078 0.79952706099221 0.26205137 0.8436076 prediction 0.599054121984421 Functional Gain - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:167992238 chr1:167992241 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_101978 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:167992232-167992260
64251 chr9 75773694 75773694 1 + C A UCEC 75773690 + 75773670 75773710 41 CAATCCATCCTCGGATGTCGCTGCCTTGCATAAGGCCATAA CAATCCATCCTCGGATGTCGCTGCATTGCATAAGGCCATAA < 41bp 0.606279696230669 0.905769590203391 0.21872309 0.2196266 prediction 0.598979787945444 Functional Gain - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75773690 chr9:75773694 synonymous SNV . 0 25 hm5C_associated_SNPs_101980 0 0 7 IGF2BP2 POSTAR2 ENCODE chr9:75773619-75773715
64251 chrX 153627725 153627725 1 + C G LUSC 153627724 + 153627704 153627744 41 TACCCAAAGTCTCGCTTCTGCCGAGGTGTCCCTGGTAAGTA TACCCAAAGTCTCGCTTCTGCGGAGGTGTCCCTGGTAAGTA < 41bp 0.501591310670557 0.801056265587328 0.5234053 0.86523557 prediction 0.598929909833542 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627724 chrX:153627725 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_101982 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627694-153627783
64251 chr1 11718859 11718859 1 + C A rs150816569 11718855 + 11718835 11718875 41 CGTTCAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCT CGTTCAGCTCCTGTCGTCCGCGCAAGCGCCTCTGGGGACCT < 41bp 0.398803477824238 0.799430134976467 0.29174566 0.39033094 prediction 0.598860269952934 Functional Gain - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718855 chr1:11718859 nonsynonymous SNV 0.099 0 25 hm5C_associated_SNPs_101984 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:11718847-11718884
64251 chr7 92027761 92027761 1 + T G ACC 92027759 + 92027739 92027779 41 TTGGAACTTGGTGACAGCCTCATGAGACTAGGAGCAGAGAA TTGGAACTTGGTGACAGCCTCAGGAGACTAGGAGCAGAGAA < 41bp 0.505738416927826 0.805123377665316 0.25646877 0.93032134 prediction 0.59876992147498 Functional Gain - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92027759 chr7:92027761 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_101987 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:92027721-92027775
64251 chr16 72110334 72110334 1 + T A LUAD 72110330 + 72110310 72110350 41 ATCTCACCACAGGGGCCACGCTGATCAATGAACAATGGCTG ATCTCACCACAGGGGCCACGCTGAACAATGAACAATGGCTG < 41bp 0.496302355962856 0.799383055862411 0.20351905 0.11775294 prediction 0.598766111724822 Functional Gain - HPR ENSG00000261701 CDS Human protein_coding chr16:72110330 chr16:72110334 nonsynonymous SNV 0.876 5 25 hm5C_associated_SNPs_101988 0 0 2 SND1 POSTAR2 ENCODE chr16:72110310-72110350
64251 chr16 27232769 27232769 1 + C A rs76839117 27232765 + 27232745 27232785 41 ATGGCTCAAGGATAACCTACCTGCCTGCAGAGAAGTGCGAA ATGGCTCAAGGATAACCTACCTGCATGCAGAGAAGTGCGAA < 41bp 0.4498092633734 0.799334321412856 0.077202916 0.15341243 prediction 0.598668642825711 Functional Gain - KDM8 ENSG00000155666 UTR3 Human protein_coding chr16:27232765 chr16:27232769 . . 0 25 hm5C_associated_SNPs_101993 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:27232751-27232785
64251 chr22 42293112 42293112 1 + T G rs145703964 42293109 + 42293089 42293129 41 ACTTCATTCTTTTGTGGACTCTGTGGGGGTTATGAGCCCCC ACTTCATTCTTTTGTGGACTCTGGGGGGGTTATGAGCCCCC < 41bp 0.420545299403652 0.799319048564235 0.12016702 0.41697472 prediction 0.598638097128469 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42293109 chr22:42293112 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_101994 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr22:42293083-42293122
64251 chr2 171687681 171687681 1 + T A SKCM 171687677 + 171687657 171687697 41 ATCCTGGTTGACTGCAGAGACACCTTGAAGTATGGGGTTCG ATCCTGGTTGACTGCAGAGACACCATGAAGTATGGGGTTCG < 41bp 0.469704342090804 0.799298156989154 0.04764062 0.11143941 prediction 0.598596313978309 Functional Gain - GAD1 ENSG00000128683 CDS Human protein_coding chr2:171687677 chr2:171687681 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_101997 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:171687675-171687702
64251 chr22 33255299 33255299 1 + T A SKCM 33255295 + 33255275 33255315 41 GCCTGCATCCGGCAGAAGGGCGGCTACTGCAGCTGGTACCG GCCTGCATCCGGCAGAAGGGCGGCAACTGCAGCTGGTACCG < 41bp 0.512772526542297 0.812069933014013 0.9115711 0.91492724 prediction 0.598594812943432 Functional Gain - TIMP3 ENSG00000100234 CDS Human protein_coding chr22:33255295 chr22:33255299 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_101998 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:33255294-33255334
64251 chr1 25617202 25617202 1 + T A COAD 25617198 + 25617178 25617218 41 GATGCTGTCTTGGGGAAGGTCAACTTGGCGCAGTTGGTGGT GATGCTGTCTTGGGGAAGGTCAACATGGCGCAGTTGGTGGT < 41bp 0.520632811072329 0.81989980191234 0.43028027 0.47509247 prediction 0.598533981680021 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25617198 chr1:25617202 nonsynonymous SNV 0.178 3 25 hm5C_associated_SNPs_102000 0 0 1 SND1 POSTAR2 ENCODE chr1:25617134-25617202
64251 chr3 178947851 178947851 1 + T G ESCA 178947849 + 178947829 178947869 41 GCTGGATACTGTGTAGCTACCTTCATTTTGGGAATTGGAGA GCTGGATACTGTGTAGCTACCTGCATTTTGGGAATTGGAGA < 41bp 0.50485228881148 0.804073079889728 0.24335241 0.16604748 prediction 0.598441582156496 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178947849 chr3:178947851 nonsynonymous SNV 0.907 4 23 hm5C_associated_SNPs_102003 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr3:178947844-178947872
64251 chr19 47823131 47823131 1 + C A UCEC 47823127 + 47823107 47823147 41 CCTGTGGATAAAACTTCTAACACGCTGCGTGTTCCAGACAT CCTGTGGATAAAACTTCTAACACGATGCGTGTTCCAGACAT < 41bp 0.588140283775371 0.887332821256856 0.038822383 0.07027945 prediction 0.59838507496297 Functional Gain - C5AR1 ENSG00000197405 CDS Human protein_coding chr19:47823127 chr19:47823131 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_102005 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:47823127-47823149
64251 chr2 10059866 10059866 1 + T G SKCM 10059864 + 10059844 10059884 41 CGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGAAAGAG CGTGTTTCCATGGACACAGCCTGCAGGGAGTCCTGAAAGAG < 41bp 0.502972817121507 0.802163633865393 0.084695905 0.18020192 prediction 0.598381633487773 Functional Gain - TAF1B ENSG00000115750 CDS Human protein_coding chr2:10059864 chr2:10059866 synonymous SNV . 0 23 hm5C_associated_SNPs_102006 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr2:10059865-10059866
64251 chr1 167599533 167599533 1 + C A rs3738220 167599529 + 167599509 167599549 41 CGAGCGCAGCCGGGCGCGCGCCACCGCCCACTCGCCCTGTG CGAGCGCAGCCGGGCGCGCGCCACAGCCCACTCGCCCTGTG < 41bp 0.488298498090886 0.799103366121127 0.20428061 0.115357846 prediction 0.598206732242254 Functional Gain - RCSD1 ENSG00000241666 ncRNA_intronic Human antisense chr1:167599529 chr1:167599533 . . 0 25 hm5C_associated_SNPs_102009 0 0 2 DDX3X POSTAR2 ENCODE chr1:167599479-167599593
64251 chr1 238090462 238090462 1 + C A LUAD 238090458 + 238090438 238090478 41 GCTGCTGATCGAGGCCTGCCCGAACCCCAAGGCCAACAGAG GCTGCTGATCGAGGCCTGCCCGAAACCCAAGGCCAACAGAG < 41bp 0.425994183407804 0.798940846569502 0.32212874 0.5039275 prediction 0.597881693139003 Functional Gain - LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090458 chr1:238090462 . . 0 25 hm5C_associated_SNPs_102023 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:238090460-238090480
64251 chr2 37459358 37459358 1 + T A STAD 37459354 + 37459334 37459374 41 TATGTACAAAATAAAGTCTACTGGTCCCATCACTGTGGCCG TATGTACAAAATAAAGTCTACTGGACCCATCACTGTGGCCG < 41bp 0.490362171974817 0.798926519926053 0.07233226 0.13053805 prediction 0.597853039852105 Functional Gain - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37459354 chr2:37459358 synonymous SNV . 0 25 hm5C_associated_SNPs_102025 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:37459350-37459381
64251 chr12 6639115 6639115 1 + T G rs61731147 6639113 + 6639093 6639133 41 AGCTGCGACGTGGGGCCAAGCCTGAGGGCAAGGTGAGCAGC AGCTGCGACGTGGGGCCAAGCCGGAGGGCAAGGTGAGCAGC < 41bp 0.472440262174463 0.798727461728417 0.41396227 0.89215386 prediction 0.597454923456834 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6639113 chr12:6639115 synonymous SNV . 0 23 hm5C_associated_SNPs_102031 0 0 1 RBM15 POSTAR2 ENCODE chr12:6639078-6639119
64251 chr19 49842111 49842111 1 + T A UCEC 49842107 + 49842087 49842127 41 TAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGACAC TAGATAAGGTGATCTTGCCCCAGCACAGCAGGCTTGGACAC < 41bp 0.516655037959315 0.815349311721661 0.18979362 0.23981276 prediction 0.597388547524692 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49842107 chr19:49842111 nonsynonymous SNV 0.046 1 25 hm5C_associated_SNPs_102032 0 0 3 DDX24 POSTAR2 ENCODE chr19:49842092-49842157
64251 chr1 156830742 156830742 1 + C A rs201472270 156830738 + 156830718 156830758 41 GCCGCCGCGATGCTGCGAGGCGGACGGCGCGGGCAGCTTGG GCCGCCGCGATGCTGCGAGGCGGAAGGCGCGGGCAGCTTGG < 41bp 0.555296191172643 0.853981036570638 0.9014019 0.91413975 prediction 0.597369690795991 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156830738 chr1:156830742 synonymous SNV . 0 25 hm5C_associated_SNPs_102033 0 0 1 DDX3X POSTAR2 ENCODE chr1:156830645-156830867
64251 chr10 116620618 116620618 1 + C A GBM 116620614 + 116620594 116620634 41 TCCTTACGTGAACCTCGCTCCTGGCTGTAGATCTCTCTTCT TCCTTACGTGAACCTCGCTCCTGGATGTAGATCTCTCTTCT < 41bp 0.398072104410322 0.79852624919705 0.2209523 0.4646536 prediction 0.597052498394101 Functional Gain - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116620614 chr10:116620618 synonymous SNV . 0 25 hm5C_associated_SNPs_102040 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:116620581-116620619
64251 chr11 809955 809955 1 + C A rs182816891 809951 + 809931 809971 41 GTAGCGGTTTAACCCCGCCTCTTGCGTCGGCGCCTTCCTTT GTAGCGGTTTAACCCCGCCTCTTGAGTCGGCGCCTTCCTTT < 41bp 0.562191439668122 0.860662874699816 0.048511088 0.058230907 prediction 0.596942870063387 Functional Gain - RPLP2 ENSG00000177600 UTR5 Human protein_coding chr11:809951 chr11:809955 . . 0 25 hm5C_associated_SNPs_102048 0 0 6 EIF3B POSTAR2 GSE65004,GSM1585667 chr11:809931-809980
64251 chr20 61299190 61299190 1 + C A LUAD 61299186 + 61299166 61299206 41 CTACAGCCCTGTGTGCGGCTCGGACGGCCTCATGTACTTCT CTACAGCCCTGTGTGCGGCTCGGAAGGCCTCATGTACTTCT < 41bp 0.406571740956262 0.798450875046761 0.37755045 0.45366722 prediction 0.596901750093522 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299186 chr20:61299190 nonsynonymous SNV 0.003 1 25 hm5C_associated_SNPs_102049 0 0 2 GRWD1 POSTAR2 ENCODE chr20:61299186-61299274
64251 chr16 335112 335112 1 + T G CESC 335109 + 335089 335129 41 TGAGGGGCGGGCAGACTTCCCCGTGGACGAGGAGCTTGGCC TGAGGGGCGGGCAGACTTCCCCGGGGACGAGGAGCTTGGCC < 41bp 0.401315052114243 0.798401922490697 0.83368814 0.93357986 prediction 0.596803844981393 Functional Gain - PDIA2 ENSG00000185615 CDS Human protein_coding chr16:335109 chr16:335112 nonsynonymous SNV 0.891 0 24 hm5C_associated_SNPs_102051 0 0 1 TBRG4 POSTAR2 ENCODE chr16:335112-335167
64251 chr4 159136374 159136374 1 + C A LIHC 159136370 + 159136350 159136390 41 TCTCCAGTGGGTTCTTTGTGCTGCCATATGGTTGGTTGCCT TCTCCAGTGGGTTCTTTGTGCTGCAATATGGTTGGTTGCCT < 41bp 0.401182496112913 0.798388058478028 0.073691726 0.14536676 prediction 0.596776116956056 Functional Gain - TMEM144 ENSG00000164124 CDS Human protein_coding chr4:159136370 chr4:159136374 synonymous SNV . 0 25 hm5C_associated_SNPs_102054 0 0 1 PPIG POSTAR2 ENCODE chr4:159136337-159136416
64251 chr11 71671877 71671877 1 + C A UCEC 71671873 + 71671853 71671893 41 AATGGTCCTCATCCTCATCGCAACCTTGGTGGTGGCCCAGC AATGGTCCTCATCCTCATCGCAACATTGGTGGTGGCCCAGC < 41bp 0.528638177645187 0.826954144634223 0.055705905 0.103746444 prediction 0.596631933978071 Functional Gain - RNF121 ENSG00000137522 CDS Human protein_coding chr11:71671873 chr11:71671877 synonymous SNV . 0 25 hm5C_associated_SNPs_102056 0 0 8 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:71671876-71671877
64251 chr7 97833423 97833423 1 + C A THCA 97833419 + 97833399 97833439 41 TGGCCGCACTCGGCGCCTTACTCCCGGTTCTCCATCTCTCC TGGCCGCACTCGGCGCCTTACTCCAGGTTCTCCATCTCTCC < 41bp 0.372636794190051 0.798201052197137 0.48338252 0.95862824 prediction 0.596402104394275 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833419 chr7:97833423 synonymous SNV . 0 25 hm5C_associated_SNPs_102061 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:97833404-97833455
64251 chr11 67076937 67076937 1 + T G BLCA 67076934 + 67076914 67076954 41 CCTGAGCGCTTCACCTACCACAATGTGCGCCTCTGGGATGA CCTGAGCGCTTCACCTACCACAAGGTGCGCCTCTGGGATGA < 41bp 0.404205957019281 0.798182136514318 0.23593661 0.89784527 prediction 0.596364273028636 Functional Gain - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67076934 chr11:67076937 nonsynonymous SNV 0.986 3 24 hm5C_associated_SNPs_102063 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:67076902-67076937
64251 chr1 114524237 114524237 1 + C A rs144472671 114524233 + 114524213 114524253 41 CCTTTGATGCCAGCGGCACCCTGACCCCTGAACGGGCAGCA CCTTTGATGCCAGCGGCACCCTGAACCCTGAACGGGCAGCA < 41bp 0.608021454149831 0.906182890552961 0.13078293 0.16577592 prediction 0.596322872806259 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524233 chr1:114524237 nonsynonymous SNV 0.377 1 25 hm5C_associated_SNPs_102064 0 0 1 SND1 POSTAR2 ENCODE chr1:114524179-114524263
64251 chr9 71650766 71650766 1 + C A rs572324212 71650762 + 71650742 71650782 41 CACCCAGCCCAGCCCAGGCCCAGACCCTCACCCGGGTCCCG CACCCAGCCCAGCCCAGGCCCAGAACCTCACCCGGGTCCCG < 41bp 0.444366232201738 0.798159529143294 0.5300782 0.55934364 prediction 0.596319058286588 Functional Gain - FXN ENSG00000165060 CDS Human protein_coding chr9:71650762 chr9:71650766 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_102065 0 0 1 DDX3X POSTAR2 ENCODE chr9:71650694-71650865
64251 chr6 26413521 26413521 1 + T G UCEC 26413519 + 26413499 26413539 41 ACCCTGAGAGATTTAATTGGCATTATTGTGTTCTCGGCTGT ACCCTGAGAGATTTAATTGGCAGTATTGTGTTCTCGGCTGT < 41bp 0.499694952378578 0.798143138728285 0.26661295 0.32660103 prediction 0.596286277456571 Functional Gain - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26413519 chr6:26413521 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_102066 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:26413519-26413550
64251 chr7 44842037 44842037 1 + C A rs539726282 44842033 + 44842013 44842053 41 GCTGAGATTACAGATGTGAGCCACCGCACCCTACCTCATTT GCTGAGATTACAGATGTGAGCCACAGCACCCTACCTCATTT < 41bp 0.452196736315074 0.798072997653765 0.03353402 0.03185138 prediction 0.59614599530753 Functional Gain - PPIA ENSG00000196262 UTR3 Human protein_coding chr7:44842033 chr7:44842037 . . 0 25 hm5C_associated_SNPs_102069 0 0 9 CSTF2 POSTAR2 GSE37401,GSM917676 chr7:44842011-44842049
64251 chr9 131469190 131469190 1 + C A rs56251280 131469186 + 131469166 131469206 41 TTCCCACAGGGCCTGAGCTGCTGGCGGAGGAGCTACAGCAT TTCCCACAGGGCCTGAGCTGCTGGAGGAGGAGCTACAGCAT < 41bp 0.600823060289554 0.898811614368035 0.5987343 0.7133051 prediction 0.595977108156961 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131469186 chr9:131469190 nonsynonymous SNV 0.766 1 25 hm5C_associated_SNPs_102075 0 0 10 BUD13 POSTAR2 ENCODE chr9:131469148-131469210
64251 chr19 30935757 30935757 1 + T A LUAD 30935753 + 30935733 30935773 41 GCCCACGCCAACCTGTACTCCAGGTACCTCTCCTGCCTGCA GCCCACGCCAACCTGTACTCCAGGAACCTCTCCTGCCTGCA < 41bp 0.524623564620296 0.822565184274066 0.7209209 0.72100043 prediction 0.59588323930754 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935753 chr19:30935757 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102078 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:30935744-30935782
64251 chr19 15760910 15760910 1 + C G UCEC 15760909 + 15760889 15760929 41 CAGGAGCGGCGCCGCACCCTCCCTAGCCAGGGTGTTGATGA CAGGAGCGGCGCCGCACCCTCGCTAGCCAGGGTGTTGATGA < 41bp 0.49744396204093 0.797938084956129 0.0278517 0.056494236 prediction 0.595876169912257 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15760909 chr19:15760910 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_102079 0 0 1 GRWD1 POSTAR2 ENCODE chr19:15760864-15760930
64251 chr9 96793281 96793281 1 + C A rs543779652 96793277 + 96793257 96793297 41 GCCCTCGGGCCCGCTACCCACAGACCCTCCGCGGGGCAGCG GCCCTCGGGCCCGCTACCCACAGAACCTCCGCGGGGCAGCG < 41bp 0.515974011298893 0.8138885711377 0.8860018 0.91206974 prediction 0.595829119677615 Functional Gain - PTPDC1 ENSG00000158079 UTR5 Human protein_coding chr9:96793277 chr9:96793281 . . 0 25 hm5C_associated_SNPs_102081 0 0 1 PPIG POSTAR2 ENCODE chr9:96793236-96793340
64251 chr12 109539760 109539760 1 + C A rs376918741 109539756 + 109539736 109539776 41 ATATCATGGACCTAATCAAGCTCACGGGCTCTGCTTTAGTG ATATCATGGACCTAATCAAGCTCAAGGGCTCTGCTTTAGTG < 41bp 0.378350015100461 0.797871634671965 0.022465885 0.040062547 prediction 0.595743269343929 Functional Gain - UNG ENSG00000076248 CDS Human protein_coding chr12:109539756 chr12:109539760 nonsynonymous SNV 0.856 4 25 hm5C_associated_SNPs_102082 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:109539706-109539776
64251 chrX 49029582 49029582 1 + T G LUSC 49029580 + 49029560 49029600 41 GCTATTTTCTTTGTTGTCTACATGTGTGACCTGCACACCAA GCTATTTTCTTTGTTGTCTACAGGTGTGACCTGCACACCAA < 41bp 0.548338594773154 0.84618540529476 0.14874324 0.47209552 prediction 0.595693621043212 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029580 chrX:49029582 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_102084 0 0 7 CSTF2 POSTAR2 GSE37401,GSM917676 chrX:49029536-49029589
64251 chr11 9595420 9595420 1 + C A rs570544453 9595416 + 9595396 9595436 41 GTGGCGGACCCGCCCCCAGGCCCGCAGTGTCCTGGACCCCG GTGGCGGACCCGCCCCCAGGCCCGAAGTGTCCTGGACCCCG < 41bp 0.472482445110339 0.79778721433865 0.1457026 0.14328346 prediction 0.5955744286773 Functional Gain - WEE1 ENSG00000166483 UTR5 Human protein_coding chr11:9595416 chr11:9595420 . . 0 25 hm5C_associated_SNPs_102089 0 0 4 DDX3X POSTAR2 ENCODE chr11:9595241-9595499
64251 chr19 10225751 10225751 1 + C A rs537538801 10225747 + 10225727 10225767 41 GCGCTCTCGGAGGCTGTCTTCTGTCGCCAAGGGTCCCGGAC GCGCTCTCGGAGGCTGTCTTCTGTAGCCAAGGGTCCCGGAC < 41bp 0.45370608581828 0.797756834337692 0.37927407 0.4936123 prediction 0.595513668675383 Functional Gain - EIF3G;P2RY11;PPAN-P2RY11 ENSG00000130811;ENSG00000244165 UTR3 Human other chr19:10225747 chr19:10225751 . . 0 25 hm5C_associated_SNPs_102091 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10225729-10225755
64251 chr7 128097459 128097459 1 + T A UCEC 128097455 + 128097435 128097475 41 CCTCCTGGACCACCAGAAGCCAACTAGCCAACACAGAGCCC CCTCCTGGACCACCAGAAGCCAACAAGCCAACACAGAGCCC < 41bp 0.496628131332378 0.797619650100126 0.041499525 0.075054556 prediction 0.595239300200252 Functional Gain - HILPDA ENSG00000135245 CDS Human protein_coding chr7:128097455 chr7:128097459 nonsynonymous SNV 0.006 2 25 hm5C_associated_SNPs_102099 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:128097459-128097497
64251 chr16 31234185 31234185 1 + C A LUAD 31234181 + 31234161 31234201 41 CTGGCAGAGTCTCCCCCACCCGCCCGTCTGGACATCCAGCT CTGGCAGAGTCTCCCCCACCCGCCAGTCTGGACATCCAGCT < 41bp 0.379676539439162 0.797531536955391 0.08157393 0.32243282 prediction 0.595063073910782 Functional Gain - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31234181 chr16:31234185 nonsynonymous SNV 0.229 1 25 hm5C_associated_SNPs_102102 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:31234158-31234195
64251 chr1 110883833 110883833 1 + T A SKCM 110883829 + 110883809 110883849 41 AGAACGCAGCACTCGGACTGCAGCTACTTCTGTGCCTGCTT AGAACGCAGCACTCGGACTGCAGCAACTTCTGTGCCTGCTT < 41bp 0.494057486030215 0.797525661885516 0.40628362 0.3726309 prediction 0.595051323771032 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883829 chr1:110883833 synonymous SNV . 0 25 hm5C_associated_SNPs_102103 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:110883812-110883851
64251 chr9 129595397 129595397 1 + T G LUSC 129595395 + 129595375 129595415 41 CCAGCAACTCGTCCACAGAGCATGACCGCCTGAGCACGGAA CCAGCAACTCGTCCACAGAGCAGGACCGCCTGAGCACGGAA < 41bp 0.54771021008688 0.845216972358453 0.012079716 0.11392072 prediction 0.595013524543145 Functional Gain - ZBTB43 ENSG00000169155 CDS Human protein_coding chr9:129595395 chr9:129595397 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_102105 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:129595379-129595409
64251 chr20 44439809 44439809 1 + C A LUSC 44439805 + 44439785 44439825 41 TACGGACAGAGAATGAGCATCGTGCTGTTGAAGCACCTCCA TACGGACAGAGAATGAGCATCGTGATGTTGAAGCACCTCCA < 41bp 0.41339661925051 0.797495800834922 0.29913384 0.34417492 prediction 0.594991601669844 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44439805 chr20:44439809 nonsynonymous SNV 0.971 1 25 hm5C_associated_SNPs_102106 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:44439770-44439810
64251 chr16 28909683 28909683 1 + C A UCEC 28909679 + 28909659 28909699 41 GAGTGGGGCACTGGCCGGGACACCCTGCGCTGCTTGGCCCT GAGTGGGGCACTGGCCGGGACACCATGCGCTGCTTGGCCCT < 41bp 0.370222008458166 0.797487981930828 0.015479267 0.04347396 prediction 0.594975963861656 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28909679 chr16:28909683 nonsynonymous SNV 0.979 5 25 hm5C_associated_SNPs_102109 0 0 3 BUD13 POSTAR2 ENCODE chr16:28909668-28909697
64251 chr16 30939906 30939906 1 + C A COAD 30939902 + 30939882 30939922 41 CCAGGGTTCTGAATCCGAGCCAGGCTTTCTCATCCTGCCAC CCAGGGTTCTGAATCCGAGCCAGGATTTCTCATCCTGCCAC < 41bp 0.595809746461545 0.893293599538106 0.36827368 0.6144875 prediction 0.594967706153122 Functional Gain - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30939902 chr16:30939906 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_102110 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30939890-30939918
64251 chr17 66040510 66040510 1 + T A HNSC 66040506 + 66040486 66040526 41 CCAGTGGTGGAACAGTTGAACAGATTGTGTACCTTGTTCAC CCAGTGGTGGAACAGTTGAACAGAATGTGTACCTTGTTCAC < 41bp 0.498743685587141 0.797480976893209 0.60298383 0.83421755 prediction 0.594961953786418 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66040506 chr17:66040510 nonsynonymous SNV 0.745 3 25 hm5C_associated_SNPs_102111 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66040444-66040516
64251 chr22 50315316 50315316 1 + C A HNSC 50315312 + 50315292 50315332 41 AGCAGACAGGGCGACGGGTCCTGCCGGTGCCACATGGGGTA AGCAGACAGGGCGACGGGTCCTGCAGGTGCCACATGGGGTA < 41bp 0.60859740624211 0.906041458701645 0.41064698 0.656559 prediction 0.594888104919071 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50315312 chr22:50315316 synonymous SNV . 0 25 hm5C_associated_SNPs_102113 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:50315268-50315324
64251 chr16 28848322 28848322 1 + C A rs563669491 28848318 + 28848298 28848338 41 GCTCTGCCCCTGCCCGTCCCCACCCAGTCTTGCCCTCCCAT GCTCTGCCCCTGCCCGTCCCCACCAAGTCTTGCCCTCCCAT < 41bp 0.455600253704383 0.797431878112238 0.017962515 0.047844023 prediction 0.594863756224475 Functional Gain - ATXN2L ENSG00000260570 ncRNA_exonic Human antisense chr16:28848318 chr16:28848322 . . 0 25 hm5C_associated_SNPs_102115 0 0 28 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:28848233-28848357
64251 chr6 161528964 161528964 1 + T G LGG 161528962 + 161528942 161528982 41 TATGGGAAGGTGTACACCTGCATCAGCGTCGACACCGGGGA TATGGGAAGGTGTACACCTGCAGCAGCGTCGACACCGGGGA < 41bp 0.471493446016656 0.797414883728928 0.3974377 0.6090969 prediction 0.594829767457857 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161528962 chr6:161528964 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_102117 0 0 3 BUD13 POSTAR2 ENCODE chr6:161528928-161528980
64251 chr1 233802494 233802494 1 + T A ESCA 233802490 + 233802470 233802510 41 GCAGGCCGGTCCTCTACTTCCACATCCGCTGGGGCTTCTCC GCAGGCCGGTCCTCTACTTCCACAACCGCTGGGGCTTCTCC < 41bp 0.490735042759543 0.797403823830403 0.33015984 0.3755656 prediction 0.594807647660806 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802490 chr1:233802494 nonsynonymous SNV 0.976 0 25 hm5C_associated_SNPs_102118 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:233802459-233802518
64251 chr7 27138754 27138754 1 + T G rs706018 27138751 + 27138731 27138771 41 AGGAGCTGCGCAGCCCTGGCCGCTGCCGGGACGCCCTGCTC AGGAGCTGCGCAGCCCTGGCCGCGGCCGGGACGCCCTGCTC < 41bp 0.583295540737457 0.880676879525715 0.24092096 0.8790059 prediction 0.594762677576517 Functional Gain - HOTAIRM1 ENSG00000233429 ncRNA_exonic Human antisense chr7:27138751 chr7:27138754 . . 0 24 hm5C_associated_SNPs_102119 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:27138752-27138773
64251 chr16 85708430 85708430 1 + T G rs147367661 85708427 + 85708407 85708447 41 ATAGTTGGCTTCTCCCCTGTCAGTGGAAACCCCACTTCTGC ATAGTTGGCTTCTCCCCTGTCAGGGGAAACCCCACTTCTGC < 41bp 0.449981017829893 0.797308445584553 0.8266164 0.9450811 prediction 0.594616891169106 Functional Gain - GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85708427 chr16:85708430 . . 0 24 hm5C_associated_SNPs_102124 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr16:85708425-85708451
64251 chr12 57486351 57486351 1 + T A SKCM 57486347 + 57486327 57486367 41 CGAGAGAGCACCTACTTGTCCTCCTTGAAGGGCTCCAGGTG CGAGAGAGCACCTACTTGTCCTCCATGAAGGGCTCCAGGTG < 41bp 0.457822749149614 0.797297375911384 0.0067346096 0.9126866 prediction 0.594594751822767 Functional Gain - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57486347 chr12:57486351 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_102125 0 0 3 PRPF8 POSTAR2 ENCODE chr12:57486332-57486408
64251 chr5 131892688 131892688 1 + C A rs181051197 131892684 + 131892664 131892704 41 GGCCCACGTGATCCGCAGGGCGGCCGAGGCAGGAAGCTGTG GGCCCACGTGATCCGCAGGGCGGCAGAGGCAGGAAGCTGTG < 41bp 0.542829125750357 0.840112369578422 0.8194077 0.88343966 prediction 0.59456648765613 Functional Gain - RAD50 ENSG00000113522 UTR5 Human protein_coding chr5:131892684 chr5:131892688 . . 0 25 hm5C_associated_SNPs_102128 0 0 5 DDX3X POSTAR2 ENCODE chr5:131892675-131892785
64251 chr18 21057190 21057190 1 + C A LGG 21057186 + 21057166 21057206 41 GTCAGTAGAACCTACCCACCCTCACGGCCTGGAGTTCTTGT GTCAGTAGAACCTACCCACCCTCAAGGCCTGGAGTTCTTGT < 41bp 0.372467136538989 0.797263914740203 0.013073742 0.03120637 prediction 0.594527829480406 Functional Gain - RIOK3 ENSG00000101782 CDS Human protein_coding chr18:21057186 chr18:21057190 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_102130 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:21057140-21057197
64251 chr17 37360340 37360340 1 + C A UCEC 37360336 + 37360316 37360356 41 CGTGTACCCTGCAGGTATCACAGCCTGTACCTGAAGGTGAA CGTGTACCCTGCAGGTATCACAGCATGTACCTGAAGGTGAA < 41bp 0.392959839391268 0.797248593115293 0.3183733 0.28198513 prediction 0.594497186230585 Functional Gain - RPL19 ENSG00000108298 CDS Human protein_coding chr17:37360336 chr17:37360340 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_102132 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:37360340-37360380
64251 chr15 40660894 40660894 1 + C A rs145486974 40660890 + 40660870 40660910 41 CTGGGGCCTGACCTCTGCTGCGGCCACTCGGACTTCCCCTG CTGGGGCCTGACCTCTGCTGCGGCAACTCGGACTTCCCCTG < 41bp 0.411427107169875 0.797241814206801 0.86565864 0.9062296 prediction 0.594483628413603 Functional Gain - DISP2 ENSG00000140323 CDS Human protein_coding chr15:40660890 chr15:40660894 nonsynonymous SNV 0.727 0 25 hm5C_associated_SNPs_102133 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:40660879-40660933
64251 chr21 9825999 9825999 1 + C A rs538400500 9825995 + 9825975 9826015 41 CGTGGCGTCCCCTTCCCCGCCGGCCGCCTTTCTCGCGCCTT CGTGGCGTCCCCTTCCCCGCCGGCAGCCTTTCTCGCGCCTT < 41bp 0.507774040820419 0.804881516862865 0.47237697 0.7875572 prediction 0.594214952084891 Functional Gain - MIR3648-1;MIR3648-2 ENSG00000264462 ncRNA_exonic Human miRNA chr21:9825995 chr21:9825999 . . 0 25 hm5C_associated_SNPs_102137 0 0 88 NCBP3 POSTAR2 GSE38201,GSM936507 chr21:9825981-9826009
64251 chr2 217526674 217526674 1 + C A STAD 217526670 + 217526650 217526690 41 GGCCCTCTGGAGCACCTCTACTCCCTGCACATCCCCAACTG GGCCCTCTGGAGCACCTCTACTCCATGCACATCCCCAACTG < 41bp 0.614907520147868 0.91200965250467 0.23588035 0.9510912 prediction 0.594204264713603 Functional Gain - IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217526670 chr2:217526674 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_102138 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:217526661-217526690
64251 chr15 25432690 25432690 1 + T G ESCA 25432687 + 25432667 25432707 41 GGGGGTGCCCTGGGTTGGGTCGATGATGAGAACCTTATATT GGGGGTGCCCTGGGTTGGGTCGAGGATGAGAACCTTATATT < 41bp 0.546362077687356 0.843450233853665 0.21195945 0.8837924 prediction 0.594176312332618 Functional Gain - SNORD115-10 ENSG00000201943 ncRNA_exonic Human snoRNA chr15:25432687 chr15:25432690 . . 0 24 hm5C_associated_SNPs_102139 0 0 3 MBNL2 POSTAR2 GSE68890,GSM1685428 chr15:25432680-25432700
64251 chr1 109777943 109777943 1 + C A LUSC 109777939 + 109777919 109777959 41 CTGCACCGGGATGAGTGGCTCCGGCCGGAGGACCTGCCCAT CTGCACCGGGATGAGTGGCTCCGGACGGAGGACCTGCCCAT < 41bp 0.570120690552965 0.867204970697088 0.6096529 0.7316999 prediction 0.594168560288246 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109777939 chr1:109777943 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_102140 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109777908-109777951
64251 chr16 77756433 77756433 1 + C A rs114814225 77756429 + 77756409 77756449 41 CTGCTCTGCGCAAGCGCGACCGACCGAGCAGCTCCGAGGAG CTGCTCTGCGCAAGCGCGACCGACAGAGCAGCTCCGAGGAG < 41bp 0.551436194725737 0.848506567787889 0.0861792 0.15814665 prediction 0.594140746124304 Functional Gain - NUDT7 ENSG00000140876 UTR5 Human protein_coding chr16:77756429 chr16:77756433 . . 0 25 hm5C_associated_SNPs_102141 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:77756432-77756433
64251 chr3 127325076 127325076 1 + C A OV 127325072 + 127325052 127325092 41 GCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGG GCTGCAGATCTTTGATGAGGCTGCACTGGAGGTGGTACTGG < 41bp 0.384777492184169 0.797012631492394 0.24424446 0.242396 prediction 0.594025262984788 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325072 chr3:127325076 synonymous SNV . 0 25 hm5C_associated_SNPs_102143 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:127325056-127325077
64251 chr17 38346903 38346903 1 + C G rs368873031 38346902 + 38346882 38346922 41 CTGCCACCAGGTGCCCCTCCCCGAGGAGATCCAGGTCTCCC CTGCCACCAGGTGCCCCTCCCGGAGGAGATCCAGGTCTCCC < 41bp 0.481212750762007 0.796925459516739 0.88246334 0.9382217 prediction 0.593850919033478 Functional Gain - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38346902 chr17:38346903 synonymous SNV . 0 22 hm5C_associated_SNPs_102147 0 0 1 PPIG POSTAR2 ENCODE chr17:38346890-38346925
64251 chr1 1404151 1404151 1 + T G rs189706153 1404149 + 1404129 1404169 41 TTTAACCACAGAGGGGTGGGCTTCACAGGAGGTGGCTGCCA TTTAACCACAGAGGGGTGGGCTGCACAGGAGGTGGCTGCCA < 41bp 0.533393799585595 0.830308274141798 0.88464427 0.87847626 prediction 0.593828949112407 Functional Gain - ATAD3C ENSG00000215915 UTR3 Human protein_coding chr1:1404149 chr1:1404151 . . 0 23 hm5C_associated_SNPs_102148 0 0 1 FAM120A POSTAR2 ENCODE chr1:1404130-1404196
64251 chr5 85915186 85915186 1 + T G SKCM 85915183 + 85915163 85915203 41 CCAACAGAATTTGCCATTTTCAGTGGAAAACAAGTGGTCGT CCAACAGAATTTGCCATTTTCAGGGGAAAACAAGTGGTCGT < 41bp 0.577455395213829 0.874321083149582 0.40248713 0.9447777 prediction 0.593731375871506 Functional Gain - COX7C ENSG00000127184 CDS Human protein_coding chr5:85915183 chr5:85915186 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_102153 0 0 3 DROSHA POSTAR2 ENCODE chr5:85915169-85915189
64251 chr1 155156517 155156517 1 + C A SKCM 155156513 + 155156493 155156533 41 TCCTTCCTGGATGCTGTTTCCTTCCGTGGGCTCTTGGAGTG TCCTTCCTGGATGCTGTTTCCTTCAGTGGGCTCTTGGAGTG < 41bp 0.414674460597408 0.796835170665899 0.26238653 0.3164624 prediction 0.593670341331799 Functional Gain - TRIM46 ENSG00000163462 CDS Human protein_coding chr1:155156513 chr1:155156517 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_102154 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:155156492-155156518
64251 chr1 173839515 173839515 1 + C A OV 173839511 + 173839491 173839531 41 TTCGGGCTCACAAAGTGGTGCTGGCTGCCAGCTCCCCCTAT TTCGGGCTCACAAAGTGGTGCTGGATGCCAGCTCCCCCTAT < 41bp 0.396610249850239 0.796830822394026 0.5378308 0.82733977 prediction 0.593661644788052 Functional Gain - ZBTB37 ENSG00000185278 CDS Human protein_coding chr1:173839511 chr1:173839515 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102156 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:173839511-173839543
64251 chr1 15978294 15978294 1 + C G rs139539436 15978293 + 15978273 15978313 41 GGAGAGCTACCAGAGTGTGCCCGGTTGGCATATGGGGCTGG GGAGAGCTACCAGAGTGTGCCGGGTTGGCATATGGGGCTGG < 41bp 0.503002165371464 0.79977385688827 0.0786899 0.8791991 prediction 0.59354338303361 Functional Gain - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978293 chr1:15978294 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_102160 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:15978280-15978300
64251 chr6 52268150 52268150 1 + C A STAD 52268146 + 52268126 52268166 41 GAAACGGATGTGCCCCAGCTCTTCCGGGAGCCTTACATCCG GAAACGGATGTGCCCCAGCTCTTCAGGGAGCCTTACATCCG < 41bp 0.398326352900908 0.796761371708847 0.16717479 0.33634824 prediction 0.593522743417693 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268146 chr6:52268150 synonymous SNV . 0 25 hm5C_associated_SNPs_102162 0 0 4 DDX3X POSTAR2 ENCODE chr6:52268140-52268185
64251 chr19 33795402 33795402 1 + C A rs143479458 33795398 + 33795378 33795418 41 CTGCCCAGAGATCGGGAACTCTGCCCCGTAGGACTGGAAGA CTGCCCAGAGATCGGGAACTCTGCACCGTAGGACTGGAAGA < 41bp 0.422734039047465 0.796742593467094 0.33391306 0.3652737 prediction 0.593485186934188 Functional Gain - CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33795398 chr19:33795402 . . 0 25 hm5C_associated_SNPs_102164 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:33795380-33795443
64251 chr12 109523613 109523613 1 + C G rs61760225 109523612 + 109523592 109523632 41 CAATCAGTGGCTGTGGGTCTCCGATGACACTGTCCGCAAGG CAATCAGTGGCTGTGGGTCTCGGATGACACTGTCCGCAAGG < 41bp 0.504976951406983 0.801689382953624 0.30642438 0.9022324 prediction 0.593424863093283 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109523612 chr12:109523613 synonymous SNV . 0 22 hm5C_associated_SNPs_102167 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109523593-109523620
64251 chr2 8822431 8822431 1 + C A LUAD 8822427 + 8822407 8822447 41 AACATGAACGACTGCTACTCCAAGCTCAAGGAGCTGGTGCC AACATGAACGACTGCTACTCCAAGATCAAGGAGCTGGTGCC < 41bp 0.59164460455689 0.888345703211214 0.0801737 0.07506037 prediction 0.593402197308648 Functional Gain - ID2 ENSG00000115738 CDS Human protein_coding chr2:8822427 chr2:8822431 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_102170 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:8822332-8822432
64251 chr9 429816 429816 1 + C A rs536373496 429812 + 429792 429832 41 ACCCGGAGCCAAGCCTGTGCCACCCTTTACCTCCTCATGAG ACCCGGAGCCAAGCCTGTGCCACCATTTACCTCCTCATGAG < 41bp 0.397674568185323 0.796696177522949 0.015170336 0.05918631 prediction 0.593392355045898 Functional Gain - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:429812 chr9:429816 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_102171 0 0 3 FXR2 POSTAR2 ENCODE chr9:429769-429838
64251 chr9 136320455 136320455 1 + C A COAD 136320451 + 136320431 136320471 41 ATCCAGCGCCGGCGTGACACCTGCCTCGGACCCCAGGCCCA ATCCAGCGCCGGCGTGACACCTGCATCGGACCCCAGGCCCA < 41bp 0.600362427885927 0.897054578565999 0.23572156 0.33288938 prediction 0.593384301360144 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136320451 chr9:136320455 nonsynonymous SNV 0.063 0 25 hm5C_associated_SNPs_102172 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136320434-136320458
64251 chr4 57796923 57796923 1 + C A CESC 57796919 + 57796899 57796939 41 CGTTCAGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA CGTTCAGGTGGAGCCGCCACCTCCAATGGAGCATGCTCAGA < 41bp 0.457394317615776 0.796676787825264 0.10229415 0.97062004 prediction 0.593353575650528 Functional Gain - REST ENSG00000084093 CDS Human protein_coding chr4:57796919 chr4:57796923 synonymous SNV . 0 25 hm5C_associated_SNPs_102175 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:57796922-57796949
64251 chr17 73267518 73267518 1 + C A rs3826327 73267514 + 73267494 73267534 41 GCGCCTGGGCCGTGTCCGGGCCCACGCCGGACCCGCCGGCA GCGCCTGGGCCGTGTCCGGGCCCAAGCCGGACCCGCCGGCA < 41bp 0.4494915425631 0.796668429296407 0.24923354 0.5437735 prediction 0.593336858592813 Functional Gain - LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73267514 chr17:73267518 . . 0 25 hm5C_associated_SNPs_102176 0 0 1 DDX3X POSTAR2 ENCODE chr17:73267477-73267555
64251 chr2 139308582 139308582 1 + T A ESCA 139308578 + 139308558 139308598 41 AGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCTGAATGC AGTGAAGTTCGAGCAAAATTCAAAATTTCCCTTCTGAATGC < 41bp 0.506655630619211 0.803305428278076 0.11743131 0.17256856 prediction 0.593299595317731 Functional Gain - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139308578 chr2:139308582 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102178 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:139308570-139308593
64251 chr12 123879801 123879801 1 + C A rs150318048 123879797 + 123879777 123879817 41 AAAAGCCCATCAAGGGCAAACAGGCCCCCCGAAAAAAGTAA AAAAGCCCATCAAGGGCAAACAGGACCCCCGAAAAAAGTAA < 41bp 0.39758387306345 0.796647204573435 0.15825126 0.030721575 prediction 0.59329440914687 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123879797 chr12:123879801 nonsynonymous SNV 0.364 1 25 hm5C_associated_SNPs_102179 0 0 3 SF3B1 POSTAR2 ENCODE chr12:123879783-123879814
64251 chr20 18608865 18608865 1 + T G LUSC 18608862 + 18608842 18608882 41 CCAGCTCCCGGCACTGCTACCTCTGACCCAAAGCAGGTAAG CCAGCTCCCGGCACTGCTACCTCGGACCCAAAGCAGGTAAG < 41bp 0.416258760125095 0.796588176854828 0.2578063 0.58519787 prediction 0.593176353709657 Functional Gain - DTD1 ENSG00000125821 CDS Human protein_coding chr20:18608862 chr20:18608865 synonymous SNV . 0 24 hm5C_associated_SNPs_102183 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:18608835-18608866
64251 chr5 167850580 167850580 1 + C G HNSC 167850579 + 167850559 167850599 41 CCTGTCCTCAGGCAGCAGCCCCGGATCCCTCACGTCCAGCC CCTGTCCTCAGGCAGCAGCCCGGGATCCCTCACGTCCAGCC < 41bp 0.510773236001473 0.807356280812304 0.6505217 0.85659295 prediction 0.593166089621662 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850579 chr5:167850580 synonymous SNV . 0 22 hm5C_associated_SNPs_102184 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr5:167850573-167850597
64251 chr11 64853966 64853966 1 + C G UCEC 64853965 + 64853945 64853985 41 ACCTGCCGGCTATCAGTGCCCCAGCTGCAATGGCCCCATCT ACCTGCCGGCTATCAGTGCCCGAGCTGCAATGGCCCCATCT < 41bp 0.509786192663641 0.806353134158189 0.2424855 0.5825335 prediction 0.593133882989095 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64853965 chr11:64853966 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_102186 0 0 1 IGF2BP2 POSTAR2 ENCODE chr11:64853913-64854030
64251 chr6 88049844 88049844 1 + T G COAD 88049841 + 88049821 88049861 41 TTTTCTTTGACAGAACAAACCTGTAATGGCTTTCGGATTGG TTTTCTTTGACAGAACAAACCTGGAATGGCTTTCGGATTGG < 41bp 0.559626590854699 0.856119972097068 0.20087993 0.5167522 prediction 0.592986762484738 Functional Gain - SMIM8 ENSG00000111850 CDS Human protein_coding chr6:88049841 chr6:88049844 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_102193 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr6:88049836-88049860
64251 chr17 57918682 57918682 1 + C A LIHC 57918678 + 57918658 57918698 41 GTTGAATCTCATGGCAACACCAGTCGATGGGCTGTCTGACA GTTGAATCTCATGGCAACACCAGTAGATGGGCTGTCTGACA < 41bp 0.434007700862308 0.796437958055289 0.3235308 0.26428735 prediction 0.592875916110579 Functional Gain - MIR21 ENSG00000199004 ncRNA_exonic Human other chr17:57918678 chr17:57918682 . . 0 25 hm5C_associated_SNPs_102196 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:57918661-57918691
64251 chr17 66033297 66033297 1 + T A LUSC 66033293 + 66033273 66033313 41 ACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAA ACACCAGCTGCCCGTCTTCACAGAATCAAGAACAAGGGAAA < 41bp 0.512413967483181 0.808815458118005 0.2464535 0.16386762 prediction 0.592802981269649 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033293 chr17:66033297 nonsynonymous SNV 0.862 3 25 hm5C_associated_SNPs_102198 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:66033233-66033319
64251 chrX 102004814 102004814 1 + T G STAD 102004812 + 102004792 102004832 41 AGACCATAGATGAGATTAGACGTCAAATCAGGATCAGGGAG AGACCATAGATGAGATTAGACGGCAAATCAGGATCAGGGAG < 41bp 0.526583754247709 0.822977542826515 0.102491975 0.14556572 prediction 0.592787577157612 Functional Gain - ARMCX5-GPRASP2;BHLHB9 ENSG00000198908 CDS Human protein_coding chrX:102004812 chrX:102004814 synonymous SNV . 0 23 hm5C_associated_SNPs_102200 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:102004747-102004849
64251 chrX 54836400 54836400 1 + T A COAD 54836396 + 54836376 54836416 41 GACTGATACCCAGGTTCTGGCAGCTGAAAACAAGAGTCTAG GACTGATACCCAGGTTCTGGCAGCAGAAAACAAGAGTCTAG < 41bp 0.506994045470561 0.803367124334869 0.27473128 0.16429952 prediction 0.592746157728615 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836396 chrX:54836400 synonymous SNV . 0 25 hm5C_associated_SNPs_102203 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:54836367-54836422
64251 chr14 101195281 101195281 1 + C A LUAD 101195277 + 101195257 101195297 41 CCCCCACCCATTGCAGGTGCCAGCCTGGCTGGCAGGGTCCC CCCCCACCCATTGCAGGTGCCAGCATGGCTGGCAGGGTCCC < 41bp 0.397922153057016 0.79632730564292 0.38316485 0.4778465 prediction 0.592654611285839 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195277 chr14:101195281 nonsynonymous SNV 0.970 3 25 hm5C_associated_SNPs_102209 0 0 12 BUD13 POSTAR2 ENCODE chr14:101195259-101195299
64251 chr16 721934 721934 1 + C G HNSC 721933 + 721913 721953 41 CCCAGCAGCGCCCTGGGGCCCCGAGCTCCCACGCACAGTCC CCCAGCAGCGCCCTGGGGCCCGGAGCTCCCACGCACAGTCC < 41bp 0.507580348613488 0.803860185111658 0.41565058 0.4423921 prediction 0.59255967299634 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:721933 chr16:721934 synonymous SNV . 0 22 hm5C_associated_SNPs_102213 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:721920-721940
64251 chr4 110415804 110415804 1 + C G GBM 110415803 + 110415783 110415823 41 CATCAGCAAGCAGTCCTGCTCCTGATCCCGCCCCTGAACCT CATCAGCAAGCAGTCCTGCTCGTGATCCCGCCCCTGAACCT < 41bp 0.507312573641094 0.803513007876463 0.14119545 0.5639591 prediction 0.592400868470737 Functional Gain - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415803 chr4:110415804 nonsynonymous SNV 0.948 1 22 hm5C_associated_SNPs_102216 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr4:110415770-110415815
64251 chr5 167855099 167855099 1 + C A rs6874818 167855095 + 167855075 167855115 41 CTGTGTCTCAGCCGCCGTATCGGACGAGTCAGTGGCTGGAG CTGTGTCTCAGCCGCCGTATCGGAAGAGTCAGTGGCTGGAG < 41bp 0.606545503620749 0.902696324470325 0.88340926 0.90736306 prediction 0.592301641699151 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167855095 chr5:167855099 nonsynonymous SNV 0.029 3 25 hm5C_associated_SNPs_102218 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:167855097-167855139
64251 chr5 5462494 5462494 1 + T G rs78050716 5462491 + 5462471 5462511 41 GACTGTGTCAGGAGGGTTTTCTGTTGAAGAAACCAGCTGTG GACTGTGTCAGGAGGGTTTTCTGGTGAAGAAACCAGCTGTG < 41bp 0.434666290058468 0.796095044096842 0.32280388 0.88593 prediction 0.592190088193683 Functional Gain - ICE1 ENSG00000164151 CDS Human protein_coding chr5:5462491 chr5:5462494 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_102221 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr5:5462486-5462509
64251 chr10 73122361 73122361 1 + T A UCEC 73122357 + 73122337 73122377 41 GCTCTACCCTCCTGGTGCACCTCATCTAGAAGGGAGGACAC GCTCTACCCTCCTGGTGCACCTCAACTAGAAGGGAGGACAC < 41bp 0.530266987641991 0.826343181170327 0.23090124 0.7812454 prediction 0.592152387056671 Functional Gain - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73122357 chr10:73122361 nonsynonymous SNV 0.774 3 25 hm5C_associated_SNPs_102222 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:73122326-73122364
64251 chr7 99971341 99971341 1 + C A PAAD 99971337 + 99971317 99971357 41 TGCTGCCGCCAGCATTTCTGCAGCCTAGTGAGTACCCAGGA TGCTGCCGCCAGCATTTCTGCAGCATAGTGAGTACCCAGGA < 41bp 0.592702979700624 0.888698394647112 0.31727594 0.2991321 prediction 0.591990829892977 Functional Gain - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971337 chr7:99971341 nonsynonymous SNV 0.047 2 25 hm5C_associated_SNPs_102226 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:99971340-99971358
64251 chr12 27787921 27787921 1 + C A READ 27787917 + 27787897 27787937 41 CTCCATTCATGGGAAGTTTGCGAGCTCTGCACCTTGTGGAA CTCCATTCATGGGAAGTTTGCGAGATCTGCACCTTGTGGAA < 41bp 0.420195208361537 0.795956211028064 0.91919136 0.93435603 prediction 0.591912422056127 Functional Gain - PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27787917 chr12:27787921 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_102230 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:27787918-27787956
64251 chr16 31926743 31926743 1 + T A SKCM 31926739 + 31926719 31926759 41 AGCATGTAGCAAATCTTTTACTCGTTCCTCCAATCTTATTG AGCATGTAGCAAATCTTTTACTCGATCCTCCAATCTTATTG < 41bp 0.484536713565509 0.795912250886517 0.02769941 0.04902023 prediction 0.591824501773034 Functional Gain - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31926739 chr16:31926743 synonymous SNV . 0 25 hm5C_associated_SNPs_102234 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31926729-31926759
64251 chrX 103432834 103432834 1 + C A LUSC 103432830 + 103432810 103432850 41 TGGAGTGAGCGGTGCCAGTGCCAGCGCCAGCAGCAGCAGTG TGGAGTGAGCGGTGCCAGTGCCAGAGCCAGCAGCAGCAGTG < 41bp 0.408958040740694 0.795888464799417 0.6449852 0.8882389 prediction 0.591776929598834 Functional Gain - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103432830 chrX:103432834 nonsynonymous SNV 0.969 4 25 hm5C_associated_SNPs_102236 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chrX:103432787-103432834
64251 chr3 25502818 25502818 1 + T A STAD 25502814 + 25502794 25502834 41 GGGTACCACTATGGGGTCAGCGCCTGTGAGGGATGTAAGGT GGGTACCACTATGGGGTCAGCGCCAGTGAGGGATGTAAGGT < 41bp 0.476259127135019 0.79588662262376 0.09937075 0.63641936 prediction 0.59177324524752 Functional Gain - RARB ENSG00000077092 CDS Human protein_coding chr3:25502814 chr3:25502818 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_102237 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:25502804-25502828
64251 chr17 21731522 21731522 1 + C A COAD 21731518 + 21731498 21731538 41 TCAGCAGAGGCTCATCTTTGCAGGCAAGAAGTTGGAAGATG TCAGCAGAGGCTCATCTTTGCAGGAAAGAAGTTGGAAGATG < 41bp 0.576102709862341 0.871946084186716 0.8752078 0.89039433 prediction 0.591686748648751 Functional Gain - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731518 chr17:21731522 synonymous SNV . 0 25 hm5C_associated_SNPs_102240 0 0 9 GEMIN5 POSTAR2 ENCODE chr17:21731467-21731550
64251 chr8 97847387 97847387 1 + T G LUAD 97847385 + 97847365 97847405 41 TTGGCATCTCTCATTCGATCCGTGGCCTCCTTCTCCATCTA TTGGCATCTCTCATTCGATCCGGGGCCTCCTTCTCCATCTA < 41bp 0.474286634865955 0.795827113666486 0.051897734 0.83657193 prediction 0.591654227332971 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97847385 chr8:97847387 nonsynonymous SNV 0.964 3 23 hm5C_associated_SNPs_102241 0 0 2 SND1 POSTAR2 ENCODE chr8:97847364-97847407
64251 chr10 74034460 74034460 1 + T A rs111443920 74034456 + 74034436 74034476 41 TGTGCTCTCCTTTCCAGACACGGCTTACCTGGATGGGGTGT TGTGCTCTCCTTTCCAGACACGGCATACCTGGATGGGGTGT < 41bp 0.503138487066674 0.798933036341298 0.13965446 0.27094796 prediction 0.591589098549248 Functional Gain - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034456 chr10:74034460 synonymous SNV . 0 25 hm5C_associated_SNPs_102244 0 0 24 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:74034452-74034481
64251 chr3 133494403 133494403 1 + C A STAD 133494399 + 133494379 133494419 41 ACCTGGCCAGAGCCCCGAATCACGCTGTGGTCACACGGAAA ACCTGGCCAGAGCCCCGAATCACGATGTGGTCACACGGAAA < 41bp 0.614499107232477 0.910271888907046 0.21694174 0.30804384 prediction 0.591545563349136 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133494399 chr3:133494403 nonsynonymous SNV 0.752 4 25 hm5C_associated_SNPs_102245 0 0 8 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:133494402-133494420
64251 chr9 134038483 134038483 1 + T G rs35631340 134038481 + 134038461 134038501 41 TGAATCACCTGGTGGATAGTCTTCAGCAGCTCCGCCTTTAC TGAATCACCTGGTGGATAGTCTGCAGCAGCTCCGCCTTTAC < 41bp 0.491540271724173 0.795772302604385 0.5165326 0.6406499 prediction 0.59154460520877 Functional Gain - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134038481 chr9:134038483 synonymous SNV . 0 23 hm5C_associated_SNPs_102246 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:134038480-134038500
64251 chr1 156616814 156616814 1 + C G rs115373136 156616813 + 156616793 156616833 41 GTCAAGGTGAACGAGGCCTACCGGTTCCGCGTGGCACTGCC GTCAAGGTGAACGAGGCCTACGGGTTCCGCGTGGCACTGCC < 41bp 0.496238859435252 0.795759980792578 0.16454956 0.36187422 prediction 0.591519961585156 Functional Gain - BCAN ENSG00000132692 CDS Human protein_coding chr1:156616813 chr1:156616814 nonsynonymous SNV 0.992 3 22 hm5C_associated_SNPs_102251 1 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:156616800-156616820
64251 chr19 1227940 1227940 1 + C A rs535975204 1227936 + 1227916 1227956 41 CCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGG CCCAGCGCCGTCCGGCGGCCCCGCAGCAGACCAGCTGGCGG < 41bp 0.461545227093286 0.795680413567514 0.28227985 0.4035597 prediction 0.591360827135028 Functional Gain - STK11 ENSG00000118046 UTR3 Human protein_coding chr19:1227936 chr19:1227940 . . 0 25 hm5C_associated_SNPs_102257 0 0 3 METAP2 POSTAR2 ENCODE chr19:1227861-1227943
64251 chr6 151773689 151773689 1 + C A LUSC 151773685 + 151773665 151773705 41 GGGATCGCGGAAAGTGATGGCTGTCGTCCCGGCGTCTCTCT GGGATCGCGGAAAGTGATGGCTGTAGTCCCGGCGTCTCTCT < 41bp 0.585301974215664 0.880971508340802 0.37337244 0.48965678 prediction 0.591339068250276 Functional Gain - ARMT1 ENSG00000146476 CDS Human protein_coding chr6:151773685 chr6:151773689 synonymous SNV . 0 25 hm5C_associated_SNPs_102259 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:151773680-151773700
64251 chr19 33182882 33182882 1 + C A rs374445377 33182878 + 33182858 33182898 41 CTGCGCGCCATGAGCAGCTCCCTGCGGCCGGGCCCCAGCCG CTGCGCGCCATGAGCAGCTCCCTGAGGCCGGGCCCCAGCCG < 41bp 0.45360785007512 0.795595448912199 0.21497437 0.40243053 prediction 0.591190897824398 Functional Gain - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33182878 chr19:33182882 synonymous SNV . 0 25 hm5C_associated_SNPs_102263 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:33182847-33182899
64251 chr20 25203612 25203612 1 + T A rs140279087 25203608 + 25203588 25203628 41 ACCTTGCAGCTGGTGTGGGCCTCATAGGTAAGGGGGCCCGG ACCTTGCAGCTGGTGTGGGCCTCAAAGGTAAGGGGGCCCGG < 41bp 0.502724732907953 0.798207343186743 0.385623 0.39287335 prediction 0.59096522055758 Functional Gain - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25203608 chr20:25203612 nonsynonymous SNV 0.933 4 25 hm5C_associated_SNPs_102273 0 0 1 PRPF8 POSTAR2 ENCODE chr20:25203603-25203630
64251 chr1 151079598 151079598 1 + C G KIRC 151079597 + 151079577 151079617 41 TGGAGGCCAGAGGGTCATCACCATAGTGACTGATGGAGTCC TGGAGGCCAGAGGGTCATCACGATAGTGACTGATGGAGTCC < 41bp 0.513089832603178 0.808420385865803 0.25585184 0.3615239 prediction 0.59066110652525 Functional Gain - GABPB2 ENSG00000143458 CDS Human protein_coding chr1:151079597 chr1:151079598 synonymous SNV . 0 22 hm5C_associated_SNPs_102289 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151079567-151079602
64251 chr12 21669040 21669040 1 + T G rs184561186 21669037 + 21669017 21669057 41 CTTTTTAGAAATGTCCACTGCAATGGCAAAAATATTTCCAG CTTTTTAGAAATGTCCACTGCAAGGGCAAAAATATTTCCAG < 41bp 0.442056925397028 0.795221170476329 0.25890124 0.55149245 prediction 0.590442340952659 Functional Gain - GOLT1B ENSG00000111711 UTR3 Human protein_coding chr12:21669037 chr12:21669040 . . 0 24 hm5C_associated_SNPs_102301 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714641 chr12:21668954-21669057
64251 chrX 18912471 18912471 1 - G C LGG 18912472 - 18912452 18912492 41 CATGTCGAATCGGTGCTGAACCGCGTGCCGCAGCCCGAGTA CATGTCGAATCGGTGCTGAACGGCGTGCCGCAGCCCGAGTA < 41bp 0.491728610701965 0.795182116643684 0.3006197 0.8894352 prediction 0.590364233287367 Functional Gain - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912472 chrX:18912471 nonsynonymous SNV 0.948 2 22 hm5C_associated_SNPs_102303 0 0 5 BUD13 POSTAR2 ENCODE chrX:18912454-18912501
64251 chr8 27373874 27373874 1 + C A HNSC 27373870 + 27373850 27373890 41 CCCAGGCAGGTTACCGGGTCCTAGCTATGGACATGAAAGGC CCCAGGCAGGTTACCGGGTCCTAGATATGGACATGAAAGGC < 41bp 0.379760373754009 0.795162198879494 0.07115698 0.1934909 prediction 0.590324397758987 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27373870 chr8:27373874 nonsynonymous SNV 0.800 4 25 hm5C_associated_SNPs_102306 0 0 2 DDX24 POSTAR2 ENCODE chr8:27373859-27373902
64251 chr6 20402550 20402550 1 + T G COAD 20402547 + 20402527 20402567 41 GCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCATGGACAA GCGGCTGTCGTCGCCGCCGCCGCGGCAGCCTCCATGGACAA < 41bp 0.578162062011569 0.873260927472136 0.23341131 0.85448384 prediction 0.590197730921134 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402547 chr6:20402550 synonymous SNV . 0 24 hm5C_associated_SNPs_102309 0 0 4 CSTF2T POSTAR2 ENCODE chr6:20402511-20402550
64251 chr15 58834025 58834025 1 + C G LUAD 58834024 + 58834004 58834044 41 CTGGATCTGGCAGATGGTGGCCGCGCTGAAGTCTCAGCCGG CTGGATCTGGCAGATGGTGGCGGCGCTGAAGTCTCAGCCGG < 41bp 0.508856801175071 0.803928034703095 0.21732354 0.86214125 prediction 0.590142467056048 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58834024 chr15:58834025 synonymous SNV . 0 22 hm5C_associated_SNPs_102312 0 0 3 RPS3 POSTAR2 ENCODE chr15:58833998-58834167
64251 chr4 178243650 178243650 1 + T G UCEC 178243648 + 178243628 178243668 41 AATGATTCCAGCCAGAATGTCTTGAGCCTGTTTAATGGATA AATGATTCCAGCCAGAATGTCTGGAGCCTGTTTAATGGATA < 41bp 0.484761540789082 0.795058779037897 0.02703622 0.16577443 prediction 0.590117558075794 Functional Gain - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178243648 chr4:178243650 nonsynonymous SNV 0.086 1 23 hm5C_associated_SNPs_102314 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr4:178243624-178243660
64251 chr3 183353478 183353478 1 + C A rs2271977 183353474 + 183353454 183353494 41 CGCTGGAGAGTGCGCTGCGCCGCCCGCCGCTGAGGGACCGC CGCTGGAGAGTGCGCTGCGCCGCCAGCCGCTGAGGGACCGC < 41bp 0.578415788500754 0.873412825384464 0.042930335 0.27451074 prediction 0.589994073767419 Functional Gain - KLHL24 ENSG00000114796 UTR5 Human protein_coding chr3:183353474 chr3:183353478 . . 0 25 hm5C_associated_SNPs_102320 0 0 10 DDX3X POSTAR2 ENCODE chr3:183353424-183353478
64251 chr13 88328566 88328566 1 + C A LUAD 88328562 + 88328542 88328582 41 TGAGCACCACGGGGTATTTACACACCACCCCGGCGTCAGTG TGAGCACCACGGGGTATTTACACAACACCCCGGCGTCAGTG < 41bp 0.395784613798996 0.794904706748933 0.14309886 0.21120194 prediction 0.589809413497866 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328562 chr13:88328566 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_102327 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:88328564-88328603
64251 chr4 48027169 48027169 1 + T A BRCA 48027165 + 48027145 48027185 41 TGTCACAGCTGCTGGCTTCTCCTGTGCTCTACACGGACCTG TGTCACAGCTGCTGGCTTCTCCTGAGCTCTACACGGACCTG < 41bp 0.505639016002248 0.800516467203785 0.22798455 0.40466517 prediction 0.589754902403073 Functional Gain - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48027165 chr4:48027169 nonsynonymous SNV 0.315 0 25 hm5C_associated_SNPs_102329 0 0 2 DDX3X POSTAR2 ENCODE chr4:48027136-48027192
64251 chr17 41180641 41180641 1 + C G rs199859128 41180640 + 41180620 41180660 41 CAGCTGTCAGGACGGCCAGACCGGGGGAATGAGGGCGAGAT CAGCTGTCAGGACGGCCAGACGGGGGGAATGAGGGCGAGAT < 41bp 0.497324062949348 0.794819148238111 0.91299003 0.91712236 prediction 0.589638296476222 Functional Gain - RND2 ENSG00000108830 CDS Human protein_coding chr17:41180640 chr17:41180641 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_102332 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:41180622-41180661
64251 chr17 34951458 34951458 1 + T A rs143529065 34951454 + 34951434 34951474 41 CCCGGGACTTTGATCCCCTACAGATGTGACCTATCAAATGA CCCGGGACTTTGATCCCCTACAGAAGTGACCTATCAAATGA < 41bp 0.527342893068843 0.822141478593742 0.18554175 0.22429463 prediction 0.589597171049799 Functional Gain - DHRS11 ENSG00000108272 CDS Human other chr17:34951454 chr17:34951458 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_102334 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:34951395-34951465
64251 chr2 231742247 231742247 1 + C A OV 231742243 + 231742223 231742263 41 GGGAAAGACACCTACCGGCTCCGGCGCCGGGCAACGCGGAG GGGAAAGACACCTACCGGCTCCGGAGCCGGGCAACGCGGAG < 41bp 0.407014026871941 0.79472878349228 0.3704199 0.56316656 prediction 0.58945756698456 Functional Gain - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231742243 chr2:231742247 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_102340 0 0 5 LIN28B POSTAR2 ENCODE chr2:231742166-231742249
64251 chr7 56128554 56128554 1 + T A COAD 56128550 + 56128530 56128570 41 AAGTGGCAATGGCAGAAGCCCTGATTAAACATAAGCCCAGT AAGTGGCAATGGCAGAAGCCCTGAATAAACATAAGCCCAGT < 41bp 0.533834513156247 0.828504223158284 0.019334316 0.027995974 prediction 0.589339420004075 Functional Gain - CCT6A ENSG00000146731 CDS Human protein_coding chr7:56128550 chr7:56128554 nonsynonymous SNV 0.952 0 25 hm5C_associated_SNPs_102343 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:56128503-56128554
64251 chr10 135126477 135126477 1 + C A rs75714358 135126473 + 135126453 135126493 41 GCCGCCCTGGGGGCCAGGCCCTCGCCATCCTCCCCATCCTT GCCGCCCTGGGGGCCAGGCCCTCGACATCCTCCCCATCCTT < 41bp 0.557969384323333 0.852600166478658 0.26088142 0.84259284 prediction 0.589261564310651 Functional Gain - ZNF511 ENSG00000198546 UTR3 Human protein_coding chr10:135126473 chr10:135126477 . . 0 25 hm5C_associated_SNPs_102345 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:135126433-135126478
64251 chr3 158362484 158362484 1 + C A UCEC 158362480 + 158362460 158362500 41 GGGCGCGGAAGGGCCCCCGCCTCCCTAGGCTGGCAGAGGAA GGGCGCGGAAGGGCCCCCGCCTCCATAGGCTGGCAGAGGAA < 41bp 0.592516518015124 0.887118888383048 0.76323664 0.9727376 prediction 0.589204740735848 Functional Gain - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158362480 chr3:158362484 nonsynonymous SNV 0.045 0 25 hm5C_associated_SNPs_102346 0 0 3 DDX3X POSTAR2 ENCODE chr3:158362395-158362497
64251 chr3 149531005 149531005 1 + T G rs187925985 149531003 + 149530983 149531023 41 GGGGCGGGACTTCCGCTTCGCCTAGGTGTTGTCGTCCCTGC GGGGCGGGACTTCCGCTTCGCCGAGGTGTTGTCGTCCCTGC < 41bp 0.503898157532491 0.798488272678787 0.06098014 0.769415 prediction 0.589180230292593 Functional Gain - RNF13 ENSG00000082996 UTR5 Human protein_coding chr3:149531003 chr3:149531005 . . 0 23 hm5C_associated_SNPs_102347 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:149531003-149531023
64251 chr12 132401557 132401557 1 + C A rs142271947 132401553 + 132401533 132401573 41 TTAAGGCGGCGTTTGGGACACAAGCCCCGGACCCGGGCAGC TTAAGGCGGCGTTTGGGACACAAGACCCGGACCCGGGCAGC < 41bp 0.405054279829717 0.794571179550706 0.2427313 0.5483687 prediction 0.589142359101411 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132401553 chr12:132401557 nonsynonymous SNV 0.025 0 25 hm5C_associated_SNPs_102348 0 0 3 PPIG POSTAR2 ENCODE chr12:132401548-132401590
64251 chr7 2402315 2402315 1 + C A LUSC 2402311 + 2402291 2402331 41 TGGAGTACGCGTCCCCTGCCCACGCTGTGGATGCTGTGAAG TGGAGTACGCGTCCCCTGCCCACGATGTGGATGCTGTGAAG < 41bp 0.615287901716724 0.909786467122745 0.19724762 0.14485288 prediction 0.588997130812042 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2402311 chr7:2402315 nonsynonymous SNV 0.043 4 25 hm5C_associated_SNPs_102350 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr7:2402284-2402319
64251 chr5 44809402 44809402 1 + T G MESO 44809400 + 44809380 44809420 41 TACCAGTACTTCACCAAGACCGTGTTCCTGTCGGGTCTGCC TACCAGTACTTCACCAAGACCGGGTTCCTGTCGGGTCTGCC < 41bp 0.460673235286936 0.794483729734115 0.16837421 0.54461753 prediction 0.588967459468231 Functional Gain - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809400 chr5:44809402 nonsynonymous SNV 0.816 1 23 hm5C_associated_SNPs_102354 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:44809365-44809402
64251 chr18 77289043 77289043 1 + C A rs7228808 77289039 + 77289019 77289059 41 CGTCGCTGATGGAGAAAGGGCTCCCGCAGAAGGAACGGCCT CGTCGCTGATGGAGAAAGGGCTCCAGCAGAAGGAACGGCCT < 41bp 0.452551328704567 0.794468265326851 0.2033712 0.5848906 prediction 0.588936530653702 Functional Gain - NFATC1 ENSG00000131196 UTR3 Human protein_coding chr18:77289039 chr18:77289043 . . 0 25 hm5C_associated_SNPs_102356 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:77289017-77289051
64251 chr14 23236556 23236556 1 + T G LAML 23236553 + 23236533 23236573 41 GCTGCTGTCGCCCACACTACCTCTTCCTTGCGGCTTCCGGC GCTGCTGTCGCCCACACTACCTCGTCCTTGCGGCTTCCGGC < 41bp 0.406253400885512 0.794421213457372 0.0870789 0.14899367 prediction 0.588842426914745 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23236553 chr14:23236556 nonsynonymous SNV 0.007 0 24 hm5C_associated_SNPs_102359 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:23236536-23236561
64251 chr7 102004723 102004723 1 + C A rs803062 102004719 + 102004699 102004739 41 CTGGATTTGCCCCGTAGGCCCGGCCCGGGCCCCTCGGGAGC CTGGATTTGCCCCGTAGGCCCGGCACGGGCCCCTCGGGAGC < 41bp 0.481185952997637 0.794410989422243 0.20016727 0.34663835 prediction 0.588821978844486 Functional Gain - LOC100630923 ENSG00000239969 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:102004719 chr7:102004723 . . 0 25 hm5C_associated_SNPs_102360 0 0 2 AARS POSTAR2 ENCODE chr7:102004694-102004791
64251 chr19 55919938 55919938 1 + T G rs7250012 55919936 + 55919916 55919956 41 GCTTGGACAGCCTTGCACTCCGTGTGTGACCCCCACTCCTG GCTTGGACAGCCTTGCACTCCGGGTGTGACCCCCACTCCTG < 41bp 0.526803368178031 0.821199702602195 0.78491426 0.94479483 prediction 0.588792668848328 Functional Gain - UBE2S ENSG00000108106 upstream Human protein_coding chr19:55919936 chr19:55919938 . . 0 23 hm5C_associated_SNPs_102364 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:55919900-55919938
64251 chr2 173292574 173292574 1 + C A STAD 173292570 + 173292550 173292590 41 CTGTCGGCGGGGCTCCTGTCCCGGCTCGGCGCAGCCTTCAA CTGTCGGCGGGGCTCCTGTCCCGGATCGGCGCAGCCTTCAA < 41bp 0.584842116243356 0.879228362822695 0.19649336 0.15653229 prediction 0.588772493158678 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173292570 chr2:173292574 nonsynonymous SNV 0.558 1 25 hm5C_associated_SNPs_102366 0 0 2 DDX3X POSTAR2 ENCODE chr2:173292464-173292582
64251 chr1 162467648 162467648 1 + T G rs182369911 162467646 + 162467626 162467666 41 GGCTTCCGGTGTCATGGCTGCTTGAAGTCCCGGGAGTCGGT GGCTTCCGGTGTCATGGCTGCTGGAAGTCCCGGGAGTCGGT < 41bp 0.473230443330748 0.794316624562863 0.32272342 0.79777455 prediction 0.588633249125727 Functional Gain - UHMK1 ENSG00000152332 UTR5 Human protein_coding chr1:162467646 chr1:162467648 . . 0 23 hm5C_associated_SNPs_102369 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:162467634-162467657
64251 chr15 44581275 44581275 1 + C A KIRC 44581271 + 44581251 44581291 41 GCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGTGCTGC GCGGGCTGGCCGCCTGCCCTCTCTAGTGCTGGTGGTGCTGC < 41bp 0.597313431808764 0.891576689735501 0.044413835 0.68539095 prediction 0.588526515853472 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44581271 chr15:44581275 synonymous SNV . 0 25 hm5C_associated_SNPs_102372 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:44581251-44581297
64251 chr20 55206723 55206723 1 + C A rs138104861 55206719 + 55206699 55206739 41 GAGAACCTGGGGCTCCACGACATGCCTCACCAGATGGACGA GAGAACCTGGGGCTCCACGACATGACTCACCAGATGGACGA < 41bp 0.400999112331197 0.794256303489009 0.29321784 0.39890915 prediction 0.588512606978018 Functional Gain - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55206719 chr20:55206723 nonsynonymous SNV 0.940 1 25 hm5C_associated_SNPs_102373 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:55206701-55206731
64251 chr11 67377024 67377024 1 + T G STAD 67377022 + 67377002 67377042 41 CACAAGCTGCTGGAAGGCTGCCTGGTGGGGGGCCGGGCCAT CACAAGCTGCTGGAAGGCTGCCGGGTGGGGGGCCGGGCCAT < 41bp 0.45915035319302 0.794240242983894 0.3994481 0.82823575 prediction 0.588480485967788 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67377022 chr11:67377024 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_102375 0 0 6 DDX24 POSTAR2 ENCODE chr11:67376937-67377026
64251 chr20 43247329 43247329 1 + C A rs551104735 43247325 + 43247305 43247345 41 GTGAGCAGCCCACACAGGAACGCTCCTCTCGCGAGCGGCCC GTGAGCAGCCCACACAGGAACGCTACTCTCGCGAGCGGCCC < 41bp 0.425812011862526 0.794209685592736 0.062983245 0.04086432 prediction 0.588419371185471 Functional Gain - PKIG ENSG00000168734 UTR3 Human protein_coding chr20:43247325 chr20:43247329 . . 0 25 hm5C_associated_SNPs_102378 0 0 2 IGF2BP1 POSTAR2 ENCODE chr20:43247329-43247378
64251 chr1 147825732 147825732 1 + C A rs55886213 147825728 + 147825708 147825748 41 GAGCACCCTGGACTCTGAATCAAGCGATCCGAGTTCAAATC GAGCACCCTGGACTCTGAATCAAGAGATCCGAGTTCAAATC < 41bp 0.483659483152007 0.794157431970625 0.9083649 0.9226173 prediction 0.588314863941251 Functional Gain - NBPF19 ENSG00000224481;ENSG00000272824 intergenic Human other chr1:147825728 chr1:147825732 . . 0 25 hm5C_associated_SNPs_102381 0 0 23 DIS3L2 POSTAR2 GSE81537,GSM2155555 chr1:147825680-147825760
64251 chr10 13214704 13214704 1 + T G UCEC 13214702 + 13214682 13214722 41 CAACATGCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCA CAACATGCTTTTCTGCGGAGCTGGATGTCCCTGCGCTACCA < 41bp 0.550765719428131 0.8448086791274 0.13784671 0.84853065 prediction 0.58808591939854 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13214702 chr10:13214704 synonymous SNV . 0 23 hm5C_associated_SNPs_102386 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:13214696-13214724
64251 chr10 45920485 45920485 1 + C G SKCM 45920484 + 45920464 45920504 41 GGCTGCAACCCTGTGTTGATCCGGCGCTGCACAGAGCTGCC GGCTGCAACCCTGTGTTGATCGGGCGCTGCACAGAGCTGCC < 41bp 0.52515440243182 0.81916747453827 0.6527815 0.90841514 prediction 0.588026144212902 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45920484 chr10:45920485 nonsynonymous SNV 0.214 1 22 hm5C_associated_SNPs_102388 0 0 1 DDX24 POSTAR2 ENCODE chr10:45920478-45920514
64251 chr16 58545785 58545785 1 + C A rs3743566 58545781 + 58545761 58545801 41 AGGGAGATTCGCTACGGATCCAGGCCATTCCTGGGTGAGCC AGGGAGATTCGCTACGGATCCAGGACATTCCTGGGTGAGCC < 41bp 0.5824952894527 0.876468128807857 0.45558304 0.7589735 prediction 0.587945678710312 Functional Gain - NDRG4 ENSG00000103034 UTR3 Human protein_coding chr16:58545781 chr16:58545785 . . 0 25 hm5C_associated_SNPs_102394 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:58545777-58545812
64251 chr9 977258 977258 1 + T G LUAD 977256 + 977236 977276 41 GCCAACGAGAGCTTGGAGAGCCTCATCCCCGACTCGCTGCG GCCAACGAGAGCTTGGAGAGCCGCATCCCCGACTCGCTGCG < 41bp 0.554626899293919 0.848599681134427 0.14527085 0.16826257 prediction 0.587945563681016 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:977256 chr9:977258 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_102395 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:977255-977281
64251 chr16 2578585 2578585 1 + C G COAD 2578584 + 2578564 2578604 41 AGCGCCCTGACCCACTGGGTCCCAGGTCCCAGCCCGCATGC AGCGCCCTGACCCACTGGGTCGCAGGTCCCAGCCCGCATGC < 41bp 0.508961632432825 0.802894488807274 0.056877583 0.259274 prediction 0.587865712748899 Functional Gain - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578584 chr16:2578585 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_102398 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:2578582-2578622
64251 chr1 246923314 246923314 1 + T A LUSC 246923310 + 246923290 246923330 41 GCATCACCTCTGTTATTAAGCTGATGTTTGCAGGACTTTTC GCATCACCTCTGTTATTAAGCTGAAGTTTGCAGGACTTTTC < 41bp 0.482928222366305 0.793906048693105 0.2699435 0.25030184 prediction 0.58781209738621 Functional Gain - SCCPDH ENSG00000143653 CDS Human protein_coding chr1:246923310 chr1:246923314 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_102400 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:246923259-246923375
64251 chr7 1131069 1131069 1 + C A rs138061097 1131065 + 1131045 1131085 41 ACCCAGAGAGTGAGCAGCTCCACGCGGGACTGTGCACGGTG ACCCAGAGAGTGAGCAGCTCCACGAGGGACTGTGCACGGTG < 41bp 0.499448629349559 0.793877282253082 0.40921372 0.73188007 prediction 0.587754564506165 Functional Gain - GPER1 ENSG00000164850 UTR5 Human protein_coding chr7:1131065 chr7:1131069 . . 0 25 hm5C_associated_SNPs_102404 0 0 4 BUD13 POSTAR2 ENCODE chr7:1131015-1131083
64251 chr10 102822322 102822322 1 + C G rs201640457 102822321 + 102822301 102822341 41 TGCCCGAACGCGCTGATGCCCCGAGTGCTCGCAGGGCTTCC TGCCCGAACGCGCTGATGCCCGGAGTGCTCGCAGGGCTTCC < 41bp 0.497591737814883 0.793785632869841 0.21682575 0.8707818 prediction 0.587571265739681 Functional Gain - KAZALD1 ENSG00000107821 UTR5 Human protein_coding chr10:102822321 chr10:102822322 . . 0 22 hm5C_associated_SNPs_102410 0 0 3 BUD13 POSTAR2 ENCODE chr10:102822243-102822325
64251 chr10 19896799 19896799 1 + T G rs16919148 19896797 + 19896777 19896817 41 TGTGATGGTTTTGCCGACTGCATGGATTTCCAGCTTGATGA TGTGATGGTTTTGCCGACTGCAGGGATTTCCAGCTTGATGA < 41bp 0.554638311093471 0.848224674067306 0.10464534 0.72088516 prediction 0.58717272594767 Functional Gain - MALRD1 ENSG00000204740 CDS Human protein_coding chr10:19896797 chr10:19896799 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_102425 0 0 1 PPIG POSTAR2 ENCODE chr10:19896741-19896835
64251 chr8 27528508 27528508 1 + C A SKCM 27528504 + 27528484 27528524 41 CAGAGGCCCGAAAGGAGACCCCGGCAGCTTGGGCCCCCTGG CAGAGGCCCGAAAGGAGACCCCGGAAGCTTGGGCCCCCTGG < 41bp 0.425045885021059 0.793579592392368 0.3123545 0.7056301 prediction 0.587159184784736 Functional Gain - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27528504 chr8:27528508 synonymous SNV . 0 25 hm5C_associated_SNPs_102426 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27528498-27528550
64251 chr17 4836276 4836276 1 - A C BRCA 4836279 - 4836259 4836299 41 CAAGAGGCAGCGAGGTCAGCCGGTTGAAGGAGACGTCCAGG CAAGAGGCAGCGAGGTCAGCCGGGTGAAGGAGACGTCCAGG < 41bp 0.589368901612718 0.882918201997429 0.8203653 0.930694 prediction 0.587098600769422 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836279 chr17:4836276 nonsynonymous SNV 0.921 4 24 hm5C_associated_SNPs_102429 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:4836217-4836294
64251 chr1 162467935 162467935 1 + C A UCEC 162467931 + 162467911 162467951 41 CGCTGCTGCGGCAACCCTGGCTCGCCCCCCGGCGCCCTCAA CGCTGCTGCGGCAACCCTGGCTCGACCCCCGGCGCCCTCAA < 41bp 0.598505851870169 0.892033978099559 0.19949609 0.34332103 prediction 0.58705625245878 Functional Gain - UHMK1 ENSG00000152332 CDS Human protein_coding chr1:162467931 chr1:162467935 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_102431 0 0 1 RBM15 POSTAR2 ENCODE chr1:162467923-162468001
64251 chr22 39382006 39382006 1 + C A rs144579352 39382002 + 39381982 39382022 41 GTCACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACTG GTCACCCTGACCATCTCTGCCGCCAGCCTCTACTACTACTG < 41bp 0.379424498386129 0.793481352519911 0.040759176 0.28713822 prediction 0.586962705039822 Functional Gain - APOBEC3B ENSG00000179750 CDS Human protein_coding chr22:39382002 chr22:39382006 nonsynonymous SNV 0.115 3 25 hm5C_associated_SNPs_102435 0 0 2 YBX3 POSTAR2 ENCODE chr22:39381975-39382008
64251 chr19 47422639 47422639 1 + T G LUAD 47422637 + 47422617 47422657 41 TCAGCGAGATCCAATGTAAACGTGGACTTGGCTTTCAGCAC TCAGCGAGATCCAATGTAAACGGGGACTTGGCTTTCAGCAC < 41bp 0.466880085167314 0.793365776979485 0.37115353 0.90565306 prediction 0.586731553958969 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422637 chr19:47422639 nonsynonymous SNV 0.976 5 23 hm5C_associated_SNPs_102440 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47422620-47422640
64251 chrX 48126808 48126808 1 + T G rs12396577 48126805 + 48126785 48126825 41 AGCCCCCCTCACTCTGTTTCCTGTTCAGCATGTACTCCCCT AGCCCCCCTCACTCTGTTTCCTGGTCAGCATGTACTCCCCT < 41bp 0.479812951776121 0.793310718867068 0.09919393 0.31325817 prediction 0.586621437734136 Functional Gain - SSX1 ENSG00000126752 UTR3 Human protein_coding chrX:48126805 chrX:48126808 . . 0 24 hm5C_associated_SNPs_102441 0 0 2 IGF2BP2 POSTAR2 ENCODE chrX:48126763-48126811
64251 chr2 85133174 85133174 1 + C G LUAD 85133173 + 85133153 85133193 41 ACCAGACATGGGGGAAATCGCCAGCTTCGATAAGGCCAAGC ACCAGACATGGGGGAAATCGCGAGCTTCGATAAGGCCAAGC < 41bp 0.497762345564675 0.793194378942918 0.8892824 0.89726543 prediction 0.586388757885835 Functional Gain - TMSB10 ENSG00000034510 CDS Human protein_coding chr2:85133173 chr2:85133174 synonymous SNV . 0 22 hm5C_associated_SNPs_102447 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:85133138-85133216
64251 chr3 52823817 52823817 1 + C A CESC 52823813 + 52823793 52823833 41 TCAGAACATTACGCTGAACCCCGGCTTTGGTGGGCCTGTGT TCAGAACATTACGCTGAACCCCGGATTTGGTGGGCCTGTGT < 41bp 0.398728521627783 0.793191483084172 0.7387667 0.8544792 prediction 0.586382966168344 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52823813 chr3:52823817 synonymous SNV . 0 25 hm5C_associated_SNPs_102450 0 0 1 PPIG POSTAR2 ENCODE chr3:52823810-52823920
64251 chr2 242758105 242758105 1 + C G HNSC 242758104 + 242758084 242758124 41 CGGCTACACATGGGTATCCGCCTGAGCCAGTCCCCGCTGGA CGGCTACACATGGGTATCCGCGTGAGCCAGTCCCCGCTGGA < 41bp 0.514371651471282 0.807556210566772 0.6165927 0.8653089 prediction 0.586369118190979 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758104 chr2:242758105 nonsynonymous SNV 0.083 4 22 hm5C_associated_SNPs_102451 0 0 2 DDX3X POSTAR2 ENCODE chr2:242758091-242758139
64251 chr4 166300542 166300542 1 + C A LUSC 166300538 + 166300518 166300558 41 ATCTCCTTCGAGTACCACCGCTACCCCGAGCTGCGCGAGGC ATCTCCTTCGAGTACCACCGCTACACCGAGCTGCGCGAGGC < 41bp 0.407191394893235 0.793178547153321 0.07531673 0.11905986 prediction 0.586357094306642 Functional Gain - CPE ENSG00000109472 CDS Human protein_coding chr4:166300538 chr4:166300542 nonsynonymous SNV 0.957 0 25 hm5C_associated_SNPs_102452 0 0 7 DDX3X POSTAR2 ENCODE chr4:166300539-166300576
64251 chr4 1347132 1347132 1 + C A STAD 1347128 + 1347108 1347148 41 TCAGATGAGGACGAGGACAGCGACCTCGAGGAGTTTGTGCG TCAGATGAGGACGAGGACAGCGACATCGAGGAGTTTGTGCG < 41bp 0.383375612808652 0.793172117423687 0.095333606 0.11158189 prediction 0.586344234847374 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1347128 chr4:1347132 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_102454 0 0 6 BUD13 POSTAR2 ENCODE chr4:1347097-1347157
64251 chr3 121591442 121591442 1 + T A LUAD 121591438 + 121591418 121591458 41 GAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT GAGTAGTTGTGATAGTTCATCAGAATCCAAAAGTTCATCAT < 41bp 0.505196703352172 0.798297906203054 0.45110795 0.33775228 prediction 0.586202405701763 Functional Gain - EAF2 ENSG00000145088 CDS Human protein_coding chr3:121591438 chr3:121591442 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_102457 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:121591420-121591446
64251 chr1 119683328 119683328 1 + C A UCEC 119683324 + 119683304 119683344 41 TCTGTTCAGAGAGCCAATCCCAGTCTCGCGACTCCTGCTTG TCTGTTCAGAGAGCCAATCCCAGTATCGCGACTCCTGCTTG < 41bp 0.438911217809848 0.79307685509568 0.27439135 0.22373557 prediction 0.586153710191359 Functional Gain - LOC101929147 ENSG00000231365 ncRNA_exonic Human antisense chr1:119683324 chr1:119683328 . . 0 25 hm5C_associated_SNPs_102461 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:119683295-119683336
64251 chr3 50252876 50252876 1 + T A BLCA 50252872 + 50252852 50252892 41 TACTCCATCCACCTGCTACTCAAGTCCTCAGGGGTCGTGGG TACTCCATCCACCTGCTACTCAAGACCTCAGGGGTCGTGGG < 41bp 0.486699499954598 0.793054529224199 0.93999803 0.9426323 prediction 0.586109058448397 Functional Gain - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50252872 chr3:50252876 . 1.000 1 25 hm5C_associated_SNPs_102463 0 0 1 PPIG POSTAR2 ENCODE chr3:50252876-50252892
64251 chr17 79639902 79639902 1 + C G rs372530090 79639901 + 79639881 79639921 41 ATCTTGCAGGGGGTGAGTGCCCGATGGACTAGGGCCAAGGC ATCTTGCAGGGGGTGAGTGCCGGATGGACTAGGGCCAAGGC < 41bp 0.504354269649389 0.797396160944594 0.3329227 0.912655 prediction 0.58608378259041 Functional Gain - CCDC137 ENSG00000185298 UTR3 Human protein_coding chr17:79639901 chr17:79639902 . . 0 22 hm5C_associated_SNPs_102465 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:79639868-79639903
64251 chr13 111938519 111938519 1 + T G OV 111938517 + 111938497 111938537 41 CTTAGTAAGAGCCCTAAGACCATGAAAAAGCTGCTGCCCAA CTTAGTAAGAGCCCTAAGACCAGGAAAAAGCTGCTGCCCAA < 41bp 0.529742970892405 0.822745279442735 0.41729537 0.8901528 prediction 0.58600461710066 Functional Gain - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111938517 chr13:111938519 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_102469 0 0 2 BUD13 POSTAR2 ENCODE chr13:111938488-111938537
64251 chr16 15123847 15123847 1 + C A COAD 15123843 + 15123823 15123863 41 AAGCAGCTGGTGCCTGCAAGCGGCCTCACAGTCATGGATCT AAGCAGCTGGTGCCTGCAAGCGGCATCACAGTCATGGATCT < 41bp 0.607843238358269 0.900829059758873 0.52462727 0.5500053 prediction 0.585971642801207 Functional Gain - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15123843 chr16:15123847 nonsynonymous SNV 0.835 0 25 hm5C_associated_SNPs_102470 0 0 9 BUD13 POSTAR2 ENCODE chr16:15123816-15123871
64251 chr14 103810995 103810995 1 + C A rs539579430 103810991 + 103810971 103811011 41 TGGGGCAGTAGGGGAAATTCCACCCAATTTTGCTATGAGCC TGGGGCAGTAGGGGAAATTCCACCAAATTTTGCTATGAGCC < 41bp 0.466525168552925 0.792984557773665 0.23694965 0.17664462 prediction 0.585969115547331 Functional Gain - EIF5 ENSG00000100664 UTR3 Human protein_coding chr14:103810991 chr14:103810995 . . 0 25 hm5C_associated_SNPs_102471 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr14:103810987-103811008
64251 chr14 90499491 90499491 1 + C A GBM 90499487 + 90499467 90499507 41 AGTGAAACAGAAGTTCTTCGCTGGCAGCCAGGAGCCAATGG AGTGAAACAGAAGTTCTTCGCTGGAAGCCAGGAGCCAATGG < 41bp 0.607381634121973 0.900197354433558 0.08664334 0.21238804 prediction 0.58563144062317 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90499487 chr14:90499491 nonsynonymous SNV 0.043 1 25 hm5C_associated_SNPs_102480 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:90499482-90499502
64251 chr2 133403777 133403777 1 - G C CESC 133403778 - 133403758 133403798 41 CGGGTACCAGTCCTTCTGCTCCCCAGGGAAACTGAACTCAG CGGGTACCAGTCCTTCTGCTCGCCAGGGAAACTGAACTCAG < 41bp 0.497352550160661 0.792794276443055 0.24226353 0.41254276 prediction 0.585588552886109 Functional Gain - LYPD1 ENSG00000150551 CDS Human protein_coding chr2:133403778 chr2:133403777 synonymous SNV . 0 22 hm5C_associated_SNPs_102482 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:133403757-133403788
64251 chr13 113803395 113803395 1 + C A CESC 113803391 + 113803371 113803411 41 TGAACGTGGCGCCTGCCTGCCTCCCCGAGCGTGACTGGGCC TGAACGTGGCGCCTGCCTGCCTCCACGAGCGTGACTGGGCC < 41bp 0.366924281989722 0.792772867637359 0.1304884 0.9584825 prediction 0.585545735274718 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113803391 chr13:113803395 nonsynonymous SNV 0.732 5 25 hm5C_associated_SNPs_102484 0 0 3 RPS3 POSTAR2 ENCODE chr13:113803360-113803415
64251 chr2 173460705 173460705 1 + T G rs180942102 173460703 + 173460683 173460723 41 TTCCGCAGTGCCTAGACACACTTGGGACATCGGAAAATCCA TTCCGCAGTGCCTAGACACACTGGGGACATCGGAAAATCCA < 41bp 0.537377449219547 0.830124386976485 0.017748803 0.13856238 prediction 0.585493875513877 Functional Gain - PDK1 ENSG00000152256 UTR3 Human protein_coding chr2:173460703 chr2:173460705 . . 0 23 hm5C_associated_SNPs_102490 0 0 1 GRWD1 POSTAR2 ENCODE chr2:173460591-173460779
64251 chr10 45486510 45486510 1 + C G OV 45486509 + 45486489 45486529 41 CTGACTTGGGCGTGGAAGTCCCCCATGAAGTGAGTGGGGGC CTGACTTGGGCGTGGAAGTCCGCCATGAAGTGAGTGGGGGC < 41bp 0.505124706265811 0.797859016138143 0.16632107 0.84281915 prediction 0.585468619744665 Functional Gain - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45486509 chr10:45486510 nonsynonymous SNV 0.319 4 22 hm5C_associated_SNPs_102492 0 0 3 BUD13 POSTAR2 ENCODE chr10:45486419-45486524
64251 chr9 12775919 12775919 1 + T A COAD 12775915 + 12775895 12775935 41 AGCTACTGCAGCTTCCCTCCCTCCTTGTCGTCCTCCTCTTC AGCTACTGCAGCTTCCCTCCCTCCATGTCGTCCTCCTCTTC < 41bp 0.562698374389515 0.855387078846513 0.092351586 0.9543461 prediction 0.585377408913996 Functional Gain - LURAP1L ENSG00000153714 CDS Human protein_coding chr9:12775915 chr9:12775919 nonsynonymous SNV 0.951 0 25 hm5C_associated_SNPs_102498 0 0 1 RBM15 POSTAR2 ENCODE chr9:12775887-12775951
64251 chr15 98514407 98514407 1 + T G SARC 98514405 + 98514385 98514425 41 GAAGAGAGCCAGCCTGTTTCCTTCATTCTCTGAACGTATTT GAAGAGAGCCAGCCTGTTTCCTGCATTCTCTGAACGTATTT < 41bp 0.512587891301779 0.805273409809635 0.16027984 0.18080834 prediction 0.585371037015711 Functional Gain - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98514405 chr15:98514407 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_102499 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:98514407-98514408
64251 chr16 54967295 54967295 1 + C A UCEC 54967291 + 54967271 54967311 41 GGCCCTCGGTTATCCATTCGCCGCCTCCGCCGCCGCCTCCT GGCCCTCGGTTATCCATTCGCCGCATCCGCCGCCGCCTCCT < 41bp 0.401971330635888 0.7926827748198 0.24363375 0.23849073 prediction 0.5853655496396 Functional Gain - IRX5 ENSG00000176842 CDS Human protein_coding chr16:54967291 chr16:54967295 nonsynonymous SNV 0.494 3 25 hm5C_associated_SNPs_102500 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:54967279-54967298
64251 chr9 96392312 96392312 1 + T G LUAD 96392309 + 96392289 96392329 41 GACATATACCACTGCCCAAACTGTGAGAAAACCCATGGGAA GACATATACCACTGCCCAAACTGGGAGAAAACCCATGGGAA < 41bp 0.404256960087474 0.792678413166807 0.13779354 0.78510386 prediction 0.585356826333614 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96392309 chr9:96392312 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_102502 0 0 1 PPIG POSTAR2 ENCODE chr9:96392251-96392343
64251 chr9 98229635 98229635 1 - G T CHOL 98229639 - 98229619 98229659 41 GGCACCACCCGAGTGAGAGACGGGCTGGACCTTACGGACAT GGCACCACCCGAGTGAGAGACGGGATGGACCTTACGGACAT < 41bp 0.596442937095941 0.889111927290146 0.8192295 0.8551376 prediction 0.585337980388411 Functional Gain - PTCH1 ENSG00000185920 CDS Human protein_coding chr9:98229639 chr9:98229635 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_102503 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr9:98229616-98229640
64251 chr3 9803340 9803340 1 - G C LUSC 9803341 - 9803321 9803361 41 CCCGGGCAGTGTGCTCTCCACCGCCTGTGGAACTCCGGGAT CCCGGGCAGTGTGCTCTCCACGGCCTGTGGAACTCCGGGAT < 41bp 0.523359023985288 0.815945420858979 0.09273955 0.22004822 prediction 0.585172793747383 Functional Gain - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9803341 chr3:9803340 synonymous SNV . 0 22 hm5C_associated_SNPs_102508 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:9803320-9803348
64251 chr12 48359923 48359923 1 + C A PAAD 48359919 + 48359899 48359939 41 TTCTACACGGTGGCAGTGACCAGCCTGTCCAGCCAGATTCA TTCTACACGGTGGCAGTGACCAGCATGTCCAGCCAGATTCA < 41bp 0.615003233404429 0.907479211444301 0.053772718 0.11392975 prediction 0.584951956079745 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48359919 chr12:48359923 nonsynonymous SNV 0.993 3 25 hm5C_associated_SNPs_102516 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:48359902-48359938
64251 chr6 26598969 26598969 1 + T G rs186218450 26598966 + 26598946 26598986 41 CTACCCGGGCAGACATTTTACTGTGTTTCTCAGACCAAGTG CTACCCGGGCAGACATTTTACTGGGTTTCTCAGACCAAGTG < 41bp 0.507104971854398 0.79957510567644 0.075348526 0.5488587 prediction 0.584940267644084 Functional Gain - ABT1 ENSG00000146109 UTR3 Human protein_coding chr6:26598966 chr6:26598969 . . 0 24 hm5C_associated_SNPs_102517 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:26598895-26599000
64251 chr17 79687871 79687871 1 + T G rs562742020 79687868 + 79687848 79687888 41 CTGGGCCCCCCCGCTTGGCTCCCTGGGGGAATGGCCCAGGC CTGGGCCCCCCCGCTTGGCTCCCGGGGGGAATGGCCCAGGC < 41bp 0.527399142236848 0.819831240963577 0.19683051 0.5895052 prediction 0.584864197453457 Functional Gain - SLC25A10 ENSG00000183048 UTR3 Human protein_coding chr17:79687868 chr17:79687871 . . 0 24 hm5C_associated_SNPs_102519 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79687825-79687877
64251 chr6 142539729 142539729 1 + T A HNSC 142539725 + 142539705 142539745 41 GCAGTATGAAGATGTAAGCACTGCTGTCCAGAATCTACAAA GCAGTATGAAGATGTAAGCACTGCAGTCCAGAATCTACAAA < 41bp 0.48371794771897 0.792350393181891 0.10011798 0.13201672 prediction 0.584700786363781 Functional Gain - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142539725 chr6:142539729 synonymous SNV . 0 25 hm5C_associated_SNPs_102527 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:142539687-142539781
64251 chr11 20515752 20515752 1 + T G COAD 20515749 + 20515729 20515769 41 GCCCTCAGAGCACCAAAACACACTGGAAACAAACAGTATTT GCCCTCAGAGCACCAAAACACACGGGAAACAAACAGTATTT < 41bp 0.427018698840479 0.792343594471223 0.04715258 0.23850816 prediction 0.584687188942446 Functional Gain - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20515749 chr11:20515752 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_102529 0 0 1 IGF2BP2 POSTAR2 ENCODE chr11:20515710-20515771
64251 chr15 90931486 90931486 1 + C A rs550262812 90931482 + 90931462 90931502 41 CGGGGCCTCGGGGACCCCGGCAAGCCCGCGCACTTGGCAGG CGGGGCCTCGGGGACCCCGGCAAGACCGCGCACTTGGCAGG < 41bp 0.544190109526503 0.836506216251572 0.7433678 0.8415509 prediction 0.584632213450138 Functional Gain - IQGAP1 ENSG00000140575 UTR5 Human protein_coding chr15:90931482 chr15:90931486 . . 0 25 hm5C_associated_SNPs_102532 0 0 3 FMR1 POSTAR2 ENCODE chr15:90931481-90931543
64251 chr19 35551628 35551628 1 + C G KIRC 35551627 + 35551607 35551647 41 GGGGTGCAGGCTGTGGTCTACCACGGGGGCTATCTTCCCTT GGGGTGCAGGCTGTGGTCTACGACGGGGGCTATCTTCCCTT < 41bp 0.517672273314905 0.809979367340917 0.46328068 0.74075353 prediction 0.584614188052025 Functional Gain - HPN ENSG00000105707 CDS Human protein_coding chr19:35551627 chr19:35551628 nonsynonymous SNV 0.789 5 22 hm5C_associated_SNPs_102534 0 0 1 DDX3X POSTAR2 ENCODE chr19:35551563-35551632
64251 chr3 12447409 12447409 1 + C G BLCA 12447408 + 12447388 12447428 41 GTTTGGGCGGATGCCACAGGCCGAGAAGGAGAAGCTGTTGG GTTTGGGCGGATGCCACAGGCGGAGAAGGAGAAGCTGTTGG < 41bp 0.496093437985899 0.792172152919079 0.050022185 0.78173125 prediction 0.584344305838157 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12447408 chr3:12447409 synonymous SNV . 0 22 hm5C_associated_SNPs_102546 0 0 1 U2AF2 POSTAR2 ENCODE chr3:12447364-12447421
64251 chr17 48733283 48733283 1 + T G SKCM 48733280 + 48733260 48733300 41 CCTGGGTGCCCTGCATCTACCTGTGGGTCGCCCTGCCCTGC CCTGGGTGCCCTGCATCTACCTGGGGGTCGCCCTGCCCTGC < 41bp 0.608966214307635 0.901105688792273 0.7254298 0.9394765 prediction 0.584278948969276 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48733280 chr17:48733283 nonsynonymous SNV 0.811 3 24 hm5C_associated_SNPs_102548 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:48733280-48733300
64251 chr15 41859680 41859680 1 + T G SKCM 41859677 + 41859657 41859697 41 AGCCTCAGGGTGCGCTGTGCCAATGCCTTGGGGCCCTCTCC AGCCTCAGGGTGCGCTGTGCCAAGGCCTTGGGGCCCTCTCC < 41bp 0.392944619530308 0.79211805928123 0.23985344 0.84133446 prediction 0.584236118562459 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41859677 chr15:41859680 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_102551 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:41859675-41859702
64251 chr10 1061765 1061765 1 + C G rs41294962 1061764 + 1061744 1061784 41 AAGCGGGAAGACTCTGCTCCCCCGTCCTCTGTGGCCCGGAG AAGCGGGAAGACTCTGCTCCCGCGTCCTCTGTGGCCCGGAG < 41bp 0.512286412768054 0.804395051998874 0.106996 0.37896654 prediction 0.58421727846164 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061764 chr10:1061765 nonsynonymous SNV 0.039 1 22 hm5C_associated_SNPs_102553 0 0 14 FUS POSTAR2 DRA001158,DRS012384 chr10:1061746-1061781
64251 chr6 116566467 116566467 1 + T G rs76809089 116566464 + 116566444 116566484 41 TTAGAAAACACACTGGTTTTCACTATCTGGTTTACAAACAC TTAGAAAACACACTGGTTTTCACGATCTGGTTTACAAACAC < 41bp 0.517857061632402 0.809862416331849 0.025563508 0.118432224 prediction 0.584010709398895 Functional Gain - NT5DC1 ENSG00000178425 UTR3 Human protein_coding chr6:116566464 chr6:116566467 . . 0 24 hm5C_associated_SNPs_102559 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:116566460-116566480
64251 chr19 50028359 50028359 1 + T G rs138667454 50028356 + 50028336 50028376 41 CTTCCTGGAATCTGACCATTCGTTGTCTGCTATGCCCGTCC CTTCCTGGAATCTGACCATTCGTGGTCTGCTATGCCCGTCC < 41bp 0.450369960212895 0.791956885913227 0.16802189 0.9014058 prediction 0.583913771826454 Functional Gain - FCGRT ENSG00000104870 UTR3 Human protein_coding chr19:50028356 chr19:50028359 . . 0 24 hm5C_associated_SNPs_102563 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50028327-50028378
64251 chr9 110068767 110068767 1 + C G rs1805333 110068766 + 110068746 110068786 41 AACTGTGGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCCC AACTGTGGCTCAGGCTCCAACGCCTGTCCCTGCCTTGGCCC < 41bp 0.489045672048959 0.791925490495683 0.13468874 0.25193915 prediction 0.583850980991366 Functional Gain - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110068766 chr9:110068767 synonymous SNV . 0 22 hm5C_associated_SNPs_102567 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:110068750-110068791
64251 chr3 57743438 57743438 1 + T G UCEC 57743436 + 57743416 57743456 41 ACTCGCACCCGTTTCAGGAGCGTCATGTCTACCTGGACGAG ACTCGCACCCGTTTCAGGAGCGGCATGTCTACCTGGACGAG < 41bp 0.522395686651719 0.814247014626553 0.109089285 0.22698784 prediction 0.583702655949668 Functional Gain - SLMAP ENSG00000163681 CDS Human protein_coding chr3:57743436 chr3:57743438 synonymous SNV . 0 23 hm5C_associated_SNPs_102570 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:57743420-57743480
64251 chr17 34854242 34854242 1 + C A MESO 34854238 + 34854218 34854258 41 TTTCCTCTGAAAGCTGCCTACACCCATAGCCGTATTGGCCA TTTCCTCTGAAAGCTGCCTACACCAATAGCCGTATTGGCCA < 41bp 0.617466268908097 0.909304226971907 0.022447646 0.09730011 prediction 0.583675916127621 Functional Gain - MYO19 ENSG00000141140 CDS Human other chr17:34854238 chr17:34854242 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_102573 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:34854226-34854250
64251 chr1 19981647 19981647 1 + C G LUAD 19981646 + 19981626 19981666 41 TGCGAAGCCAAGAACATCACCCAGATCGTGGGCCACAGCGG TGCGAAGCCAAGAACATCACCGAGATCGTGGGCCACAGCGG < 41bp 0.496666773951091 0.791834960356468 0.017575294 0.2718367 prediction 0.583669920712937 Functional Gain - MINOS1-NBL1;NBL1 ENSG00000158747;ENSG00000270136 CDS Human other chr1:19981646 chr1:19981647 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_102574 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:19981611-19981649
64251 chr21 37518652 37518652 1 + T G SKCM 37518650 + 37518630 37518670 41 TGACAGGATTCTGGTGAATGCGTGCTGCCCAGGACCAGTGA TGACAGGATTCTGGTGAATGCGGGCTGCCCAGGACCAGTGA < 41bp 0.533832736089802 0.825607612291239 0.37858516 0.88733184 prediction 0.583549752402874 Functional Gain - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37518650 chr21:37518652 nonsynonymous SNV 0.862 4 23 hm5C_associated_SNPs_102576 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr21:37518628-37518667
64251 chr3 52836783 52836783 1 + T A PRAD 52836779 + 52836759 52836799 41 TCTTCGGGAATTACATTGAGCGGCTCTGGGCCTACCTCACC TCTTCGGGAATTACATTGAGCGGCACTGGGCCTACCTCACC < 41bp 0.533490246447107 0.825253509941885 0.3060792 0.39977574 prediction 0.583526526989556 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52836779 chr3:52836783 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_102578 0 0 8 GRWD1 POSTAR2 ENCODE chr3:52836756-52836818
64251 chr10 45938873 45938873 1 + C A UCEC 45938869 + 45938849 45938889 41 CGCCCCCTGAGCCAGGTTCACGGCCGAGGTGGTAGACATCT CGCCCCCTGAGCCAGGTTCACGGCAGAGGTGGTAGACATCT < 41bp 0.614030932809717 0.905679438772949 0.27351904 0.4021406 prediction 0.583297011926464 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45938869 chr10:45938873 synonymous SNV . 0 25 hm5C_associated_SNPs_102591 0 0 2 GEMIN5 POSTAR2 ENCODE chr10:45938850-45938892
64251 chr12 120531623 120531623 1 + T G rs568737529 120531620 + 120531600 120531640 41 AGGCCCTGTCCCCCTGTCGCCACTGCTCTCCCTCCCAGCCT AGGCCCTGTCCCCCTGTCGCCACGGCTCTCCCTCCCAGCCT < 41bp 0.583013901444945 0.874655979097485 0.17536664 0.8575007 prediction 0.58328415530508 Functional Gain - BICDL1 ENSG00000135127 UTR3 Human protein_coding chr12:120531620 chr12:120531623 . . 0 24 hm5C_associated_SNPs_102594 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:120531607-120531634
64251 chr13 103504506 103504506 1 + C G DLBC 103504505 + 103504485 103504525 41 AACCAAGCACTTAAAGGAGTCCGGGATCGCCATGGGAACTC AACCAAGCACTTAAAGGAGTCGGGGATCGCCATGGGAACTC < 41bp 0.513765588861504 0.805407375426848 0.123099595 0.5476533 prediction 0.583283573130689 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103504505 chr13:103504506 nonsynonymous SNV 0.727 4 22 hm5C_associated_SNPs_102595 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:103504500-103504530
64251 chrX 153609727 153609727 1 + C A rs782157633 153609723 + 153609703 153609743 41 GCTTGCTCCCCCTGCCTTGTCCCACCAGGGAGGCAGCAGAC GCTTGCTCCCCCTGCCTTGTCCCAACAGGGAGGCAGCAGAC < 41bp 0.411187342980038 0.791633975578363 0.018374115 0.04216814 prediction 0.583267951156726 Functional Gain - EMD ENSG00000102119 UTR3 Human protein_coding chrX:153609723 chrX:153609727 . . 0 25 hm5C_associated_SNPs_102597 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153609699-153609764
64251 chr13 103451733 103451733 1 + T G rs112167466 103451730 + 103451710 103451750 41 GCCGGGCACCGCAGCATCCTCGCTCGCTCCGATGGGACGAG GCCGGGCACCGCAGCATCCTCGCGCGCTCCGATGGGACGAG < 41bp 0.470265882397727 0.791597259696548 0.19687608 0.56777024 prediction 0.583194519393096 Functional Gain - BIVM ENSG00000134897 UTR5 Human protein_coding chr13:103451730 chr13:103451733 . . 0 24 hm5C_associated_SNPs_102601 0 0 1 DDX3X POSTAR2 ENCODE chr13:103451694-103451763
64251 chr10 3143174 3143174 1 + T G rs190906331 3143172 + 3143152 3143192 41 GGTCACACCGCTTCCCTTGTCCTGGCCGGCATGCTCTGGTG GGTCACACCGCTTCCCTTGTCCGGGCCGGCATGCTCTGGTG < 41bp 0.448820808778818 0.791556910409763 0.13009128 0.8391825 prediction 0.583113820819526 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3143172 chr10:3143174 synonymous SNV . 0 23 hm5C_associated_SNPs_102607 0 0 1 EIF4G2 POSTAR2 ENCODE chr10:3143117-3143190
64251 chr9 130442503 130442503 1 + T G UCEC 130442501 + 130442481 130442521 41 TCTACCCGTTCCTCTGCCTCCTTCAGCACCACCGCCGTCAG TCTACCCGTTCCTCTGCCTCCTGCAGCACCACCGCCGTCAG < 41bp 0.546900412810725 0.838435010059057 0.07483736 0.151936 prediction 0.583069194496663 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130442501 chr9:130442503 nonsynonymous SNV 0.521 1 23 hm5C_associated_SNPs_102608 0 0 1 IGF2BP2 POSTAR2 ENCODE chr9:130442489-130442522
64251 chr20 362067 362067 1 + C A rs7260693 362063 + 362043 362083 41 GGCCCCGCGGAGCGTGGGGTCGCCCGAGTTGGGCTGGGGAA GGCCCCGCGGAGCGTGGGGTCGCCAGAGTTGGGCTGGGGAA < 41bp 0.457257085955925 0.791526317060521 0.76999664 0.9131558 prediction 0.583052634121043 Functional Gain - TRIB3 ENSG00000101255 UTR5 Human protein_coding chr20:362063 chr20:362067 . . 0 25 hm5C_associated_SNPs_102610 0 0 5 CSTF2T POSTAR2 ENCODE chr20:362061-362126
64251 chr19 1533972 1533972 1 + C A rs11084897 1533968 + 1533948 1533988 41 CCTGTGCCACCTGCTGGACCCGGCCTCTGCCTCCTGCGCTT CCTGTGCCACCTGCTGGACCCGGCATCTGCCTCCTGCGCTT < 41bp 0.606215850819147 0.897721534795409 0.25705665 0.5617325 prediction 0.583011367952524 Functional Gain - PLK5 ENSG00000185988 CDS Human protein_coding chr19:1533968 chr19:1533972 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_102613 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:1533964-1534010
64251 chr4 128760671 128760671 1 + C A rs550978856 128760667 + 128760647 128760687 41 GCAGGAGAATCGCTTGAACCCTGGCGAAACCCCATTTCTAA GCAGGAGAATCGCTTGAACCCTGGAGAAACCCCATTTCTAA < 41bp 0.561210581112532 0.852620194300876 0.330096 0.25377756 prediction 0.582819226376688 Functional Gain - HSPA4L;PLK4 ENSG00000164070 UTR3 Human protein_coding chr4:128760667 chr4:128760671 . . 0 25 hm5C_associated_SNPs_102620 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:128760651-128760680
64251 chr20 47626847 47626847 1 + T A rs2295580 47626843 + 47626823 47626863 41 CCAGGCGGCCAACATCCGCTCAGGTTGGAAGAACATCTTTG CCAGGCGGCCAACATCCGCTCAGGATGGAAGAACATCTTTG < 41bp 0.486377233494184 0.791394067699863 0.62540686 0.862036 prediction 0.582788135399726 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47626843 chr20:47626847 synonymous SNV . 0 25 hm5C_associated_SNPs_102622 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:47626830-47626865
64251 chr10 104211884 104211884 1 + C A rs186888664 104211880 + 104211860 104211900 41 GGCATGATCTCGGCACACTGCAGCCACCGTCTTCCAGGTTC GGCATGATCTCGGCACACTGCAGCAACCGTCTTCCAGGTTC < 41bp 0.434590814767052 0.791308411131557 0.24984312 0.37587038 prediction 0.582616822263115 Functional Gain - RPARP-AS1 ENSG00000269609 ncRNA_exonic Human processed_transcript chr10:104211880 chr10:104211884 . . 0 25 hm5C_associated_SNPs_102625 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:104211863-104211897
64251 chr21 35747805 35747805 1 + C A rs544115822 35747801 + 35747781 35747821 41 TTCGGGACCTGTAGTTTTCCCCGGCAGGACGGTAGAAGTCG TTCGGGACCTGTAGTTTTCCCCGGAAGGACGGTAGAAGTCG < 41bp 0.585048071328489 0.87632979199973 0.36276895 0.36969638 prediction 0.582563441342482 Functional Gain - SMIM11A;SMIM11B ENSG00000205670 UTR5 Human protein_coding chr21:35747801 chr21:35747805 . . 0 25 hm5C_associated_SNPs_102627 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr21:35747800-35747840
64251 chr1 200880605 200880605 1 + T G LUSC 200880603 + 200880583 200880623 41 TGGATTCCTTCCGGGCGGGTCCTGAGGGCCGAGGTCGCAGC TGGATTCCTTCCGGGCGGGTCCGGAGGGCCGAGGTCGCAGC < 41bp 0.442992108038994 0.791221018122118 0.705273 0.91632724 prediction 0.582442036244235 Functional Gain - C1orf106 ENSG00000163362 CDS Human protein_coding chr1:200880603 chr1:200880605 synonymous SNV . 0 23 hm5C_associated_SNPs_102634 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:200880578-200880605
64251 chr6 111493992 111493992 1 + C A PAAD 111493988 + 111493968 111494008 41 ATTTGGTTGTCGGAAAACAGCTGTCGTGGGTGCTGCTGTTG ATTTGGTTGTCGGAAAACAGCTGTAGTGGGTGCTGCTGTTG < 41bp 0.376886718991941 0.791139632361178 0.16240719 0.34894192 prediction 0.582279264722357 Functional Gain - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111493988 chr6:111493992 synonymous SNV . 0 25 hm5C_associated_SNPs_102636 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:111493976-111494010
64251 chrX 38533518 38533518 1 + C A BRCA 38533514 + 38533494 38533534 41 GGACTTACACGGACGCTATGCAGACTTACAATGGCAATGAT GGACTTACACGGACGCTATGCAGAATTACAATGGCAATGAT < 41bp 0.388516426900587 0.791061970576773 0.2908675 0.29248285 prediction 0.582123941153545 Functional Gain - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38533514 chrX:38533518 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_102641 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chrX:38533474-38533523
64251 chr16 70154529 70154529 1 + T A STAD 70154525 + 70154505 70154545 41 TGGCCCTGCCCACCCAGGCACAGGTGGTCATCTGTGGAGGT TGGCCCTGCCCACCCAGGCACAGGAGGTCATCTGTGGAGGT < 41bp 0.484178002637002 0.791025733111007 0.91178215 0.9196638 prediction 0.582051466222015 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70154525 chr16:70154529 nonsynonymous SNV 0.994 5 25 hm5C_associated_SNPs_102644 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr16:70154520-70154540
64251 chr20 3003388 3003388 1 + T G SKCM 3003386 + 3003366 3003406 41 GTCATTGATGCCATGCTGGACATGATGCATACAGAACGGAA GTCATTGATGCCATGCTGGACAGGATGCATACAGAACGGAA < 41bp 0.474769817851637 0.790928570079551 0.13589782 0.25512683 prediction 0.581857140159101 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3003386 chr20:3003388 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_102651 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:3003339-3003433
64251 chr3 160939141 160939141 1 + C A rs28384382 160939137 + 160939117 160939157 41 CAGGTTGGCAGCTGACGGGACAGCCGGGGTCTATTTTGTTG CAGGTTGGCAGCTGACGGGACAGCAGGGGTCTATTTTGTTG < 41bp 0.458612356885044 0.790912853314295 0.31691232 0.5401662 prediction 0.58182570662859 Functional Gain - NMD3 ENSG00000169251 UTR5 Human protein_coding chr3:160939137 chr3:160939141 . . 0 25 hm5C_associated_SNPs_102653 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:160939127-160939154
64251 chr11 61539083 61539083 1 + C A BLCA 61539079 + 61539059 61539099 41 ACAGGAGCCTGGGACCGTGACAGCCCTGCCTCTGCACCCCA ACAGGAGCCTGGGACCGTGACAGCACTGCCTCTGCACCCCA < 41bp 0.371367341023057 0.790895865501955 0.30858627 0.3586266 prediction 0.58179173100391 Functional Gain - MYRF ENSG00000124920 CDS Human protein_coding chr11:61539079 chr11:61539083 synonymous SNV . 0 25 hm5C_associated_SNPs_102655 0 0 2 PCBP2 POSTAR2 ENCODE chr11:61539079-61539142
64251 chr11 89885630 89885630 1 + C A LUSC 89885626 + 89885606 89885646 41 TTTGAATGGTGCTGGTGACCCACTCACTCCAGGCTATCCAG TTTGAATGGTGCTGGTGACCCACTAACTCCAGGCTATCCAG < 41bp 0.384335793242418 0.790880786916209 0.074855596 0.10037041 prediction 0.581761573832418 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89885626 chr11:89885630 synonymous SNV . 0 25 hm5C_associated_SNPs_102657 0 0 1 TBRG4 POSTAR2 ENCODE chr11:89885610-89885653
64251 chr19 42791743 42791743 1 + T G LGG 42791741 + 42791721 42791761 41 CCCATGAATGCCTTCATGATCTTCAGCAAGCGGCACCGGGC CCCATGAATGCCTTCATGATCTGCAGCAAGCGGCACCGGGC < 41bp 0.54695095095847 0.837804279547505 0.25644362 0.38889787 prediction 0.58170665717807 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42791741 chr19:42791743 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_102658 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:42791742-42791743
64251 chrX 102471104 102471104 1 + C A HNSC 102471100 + 102471080 102471120 41 TAATGGAGTCCAAAGAGGAACTAGCGGCAAACAATCTCAAC TAATGGAGTCCAAAGAGGAACTAGAGGCAAACAATCTCAAC < 41bp 0.594453143889217 0.885283137379909 0.08825478 0.30972332 prediction 0.581659986981385 Functional Gain - BEX4 ENSG00000102409 CDS Human protein_coding chrX:102471100 chrX:102471104 nonsynonymous SNV 0.079 1 25 hm5C_associated_SNPs_102660 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chrX:102471077-102471108
64251 chr8 97285595 97285595 1 + T G UCEC 97285593 + 97285573 97285613 41 GTTATTTTCTTCTTTCTTATCATCAGTGTGTTAGCTTTCCC GTTATTTTCTTCTTTCTTATCAGCAGTGTGTTAGCTTTCCC < 41bp 0.541570132600481 0.832373982149246 0.19980958 0.636396 prediction 0.581607699097529 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97285593 chr8:97285595 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_102662 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714641 chr8:97285559-97285600
64251 chr12 65672591 65672591 1 + C A CESC 65672587 + 65672567 65672607 41 CTCCCGCGCCCCCTCTCGCTCTGCCTCTCCCTCTGCCTCTG CTCCCGCGCCCCCTCTCGCTCTGCATCTCCCTCTGCCTCTG < 41bp 0.59186458006176 0.882664538985599 0.27014887 0.15843794 prediction 0.581599917847679 Functional Gain - MSRB3 ENSG00000174099 CDS Human protein_coding chr12:65672587 chr12:65672591 nonsynonymous SNV 0.545 0 25 hm5C_associated_SNPs_102663 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:65672590-65672591
64251 chr18 77807137 77807137 1 + T G rs72972289 77807134 + 77807114 77807154 41 TCCAAGCCCTGGCTCTCTGCCAGTGCAGCAGGGCTGTGAGA TCCAAGCCCTGGCTCTCTGCCAGGGCAGCAGGGCTGTGAGA < 41bp 0.430979744279513 0.79078393876671 0.087356955 0.922713 prediction 0.58156787753342 Functional Gain - RBFA ENSG00000261126 ncRNA_exonic Human lincRNA chr18:77807134 chr18:77807137 . . 0 24 hm5C_associated_SNPs_102664 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:77807135-77807184
64251 chr8 98656815 98656815 1 + C A KIRC 98656811 + 98656791 98656831 41 CCGGCTGCGGGAAATGCTCTCGGTCGGCCTAGGCTTTCTGC CCGGCTGCGGGAAATGCTCTCGGTAGGCCTAGGCTTTCTGC < 41bp 0.577860785288165 0.868640546493379 0.81406975 0.90164137 prediction 0.581559522410428 Functional Gain - MTDH ENSG00000147649 CDS Human protein_coding chr8:98656811 chr8:98656815 synonymous SNV . 0 25 hm5C_associated_SNPs_102665 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:98656788-98656816
64251 chr20 39984614 39984614 1 + C A UCEC 39984610 + 39984590 39984630 41 CCTGGAGATCCCCTCCTTGCCACCCTCCACTCCACCCTCCA CCTGGAGATCCCCTCCTTGCCACCATCCACTCCACCCTCCA < 41bp 0.362863318571995 0.790690353319896 0.003459543 0.0025821924 prediction 0.581380706639792 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39984610 chr20:39984614 synonymous SNV . 0 25 hm5C_associated_SNPs_102671 0 0 2 DDX24 POSTAR2 ENCODE chr20:39984560-39984630
64251 chr19 56164375 56164375 1 + C A rs578232683 56164371 + 56164351 56164391 41 AAACCAGGCAGGCGGGTGCCCCCCCCTCGAGTGGGGGACTG AAACCAGGCAGGCGGGTGCCCCCCACTCGAGTGGGGGACTG < 41bp 0.455828686152994 0.79061904979256 0.27879712 0.24162042 prediction 0.581238099585121 Functional Gain - CCDC106 ENSG00000173581 UTR3 Human protein_coding chr19:56164371 chr19:56164375 . . 0 25 hm5C_associated_SNPs_102677 0 0 2 PUM2 POSTAR2 ENCODE chr19:56164344-56164442
64251 chr2 54886356 54886356 1 + C A SKCM 54886352 + 54886332 54886372 41 GAGGAAGAGGCGGCCGCCTTCTCCCGAGCCGAGCACGAAGG GAGGAAGAGGCGGCCGCCTTCTCCAGAGCCGAGCACGAAGG < 41bp 0.37813385256974 0.790616016986379 0.20344141 0.93690604 prediction 0.581232033972757 Functional Gain - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54886352 chr2:54886356 synonymous SNV . 0 25 hm5C_associated_SNPs_102678 0 0 10 RBM47 POSTAR2 GSE58380,GSM1409656 chr2:54886336-54886357
64251 chr5 17345795 17345795 1 + C A rs146781914 17345791 + 17345771 17345811 41 CTAGAGTTGATTCTGCTGATCTGGCTGGCTAGGCGGGTGTC CTAGAGTTGATTCTGCTGATCTGGATGGCTAGGCGGGTGTC < 41bp 0.473761164486079 0.790592911497443 0.84191525 0.88844496 prediction 0.581185822994887 Functional Gain - BASP1;LINC02111 ENSG00000201715 ncRNA_exonic Human misc_RNA chr5:17345791 chr5:17345795 . . 0 25 hm5C_associated_SNPs_102680 0 0 1 LARP7 POSTAR2 ENCODE chr5:17345791-17345820
64251 chr18 2573020 2573020 1 + C A THCA 2573016 + 2572996 2573036 41 TTCAGTTTCCAGCGGTGGTGCTGGCCGCCTCTCCATGCAGG TTCAGTTTCCAGCGGTGGTGCTGGACGCCTCTCCATGCAGG < 41bp 0.606314131550617 0.896846355729383 0.025501758 0.114085466 prediction 0.581064448357533 Functional Gain - NDC80 ENSG00000080986 CDS Human protein_coding chr18:2573016 chr18:2573020 synonymous SNV . 0 25 hm5C_associated_SNPs_102685 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr18:2573000-2573020
64251 chr1 156255635 156255635 1 + C G rs36114587 156255634 + 156255614 156255654 41 GGCTGTGGCCTCCGTGGGAGCCGCACTCATTCTCTTCCCTT GGCTGTGGCCTCCGTGGGAGCGGCACTCATTCTCTTCCCTT < 41bp 0.517913624523776 0.80843468645135 0.19087061 0.2834348 prediction 0.581042123855148 Functional Gain - TMEM79 ENSG00000163472 CDS Human protein_coding chr1:156255634 chr1:156255635 synonymous SNV . 0 22 hm5C_associated_SNPs_102687 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:156255618-156255642
64251 chr1 151039900 151039900 1 + T A LAML 151039896 + 151039876 151039916 41 AAAACCCTGAAGGTGATGGCCTCCTTGAGTACAGCACCTTC AAAACCCTGAAGGTGATGGCCTCCATGAGTACAGCACCTTC < 41bp 0.556432989024823 0.846946711014746 0.0595071 0.9629594 prediction 0.581027443979846 Functional Gain - MLLT11 ENSG00000213190 CDS Human protein_coding chr1:151039896 chr1:151039900 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_102689 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:151039900-151039901
64251 chr19 49513331 49513331 1 + C A rs117752118 49513327 + 49513307 49513347 41 ACGCTATGGGCTCCCAGGTGCGGCCGGGACTCCCGGGATCC ACGCTATGGGCTCCCAGGTGCGGCAGGGACTCCCGGGATCC < 41bp 0.428338501258271 0.790494367257512 0.7900121 0.8227262 prediction 0.580988734515024 Functional Gain - RUVBL2 ENSG00000183207 intronic Human protein_coding chr19:49513327 chr19:49513331 . . 0 25 hm5C_associated_SNPs_102695 0 0 5 BUD13 POSTAR2 ENCODE chr19:49513327-49513361
64251 chr1 6681634 6681634 1 + C G LGG 6681633 + 6681613 6681653 41 CTGCCAAAAGTGCCGGGACTCCAAGTTTGACATCCGCCGTT CTGCCAAAAGTGCCGGGACTCGAAGTTTGACATCCGCCGTT < 41bp 0.502631014470688 0.79310720129607 0.52715033 0.8890233 prediction 0.580952373650764 Functional Gain - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6681633 chr1:6681634 synonymous SNV . 0 22 hm5C_associated_SNPs_102697 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr1:6681605-6681634
64251 chr13 28494600 28494600 1 + C A LUSC 28494596 + 28494576 28494616 41 CCGGAGGGAGCCGAGCCGGGCGTCCTGGAGGAGCCCAACCG CCGGAGGGAGCCGAGCCGGGCGTCATGGAGGAGCCCAACCG < 41bp 0.415509802194545 0.79042116682454 0.7724203 0.8870907 prediction 0.580842333649079 Functional Gain - PDX1 ENSG00000139515 CDS Human protein_coding chr13:28494596 chr13:28494600 nonsynonymous SNV 0.133 1 25 hm5C_associated_SNPs_102704 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr13:28494599-28494634
64251 chr10 70496747 70496747 1 + T A OV 70496743 + 70496723 70496763 41 CACAAACTCCAGCAAACTATCAGTTAACACAAACTGCTGCA CACAAACTCCAGCAAACTATCAGTAAACACAAACTGCTGCA < 41bp 0.483372464571395 0.790326788302505 0.13467339 0.09543958 prediction 0.580653576605011 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70496743 chr10:70496747 stopgain 1.000 1 25 hm5C_associated_SNPs_102716 0 0 18 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:70496652-70496777
64251 chr13 114290383 114290383 1 + C A UCEC 114290379 + 114290359 114290399 41 CACCCAACTCAGTCATCCACCTGCCCTTCATCATCGTCAAC CACCCAACTCAGTCATCCACCTGCACTTCATCATCGTCAAC < 41bp 0.369646477877394 0.790288251210802 0.012647271 0.02203545 prediction 0.580576502421605 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290379 chr13:114290383 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102717 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:114290339-114290390
64251 chr2 99802708 99802708 1 + C A ESCA 99802704 + 99802684 99802724 41 CTTAGTAGTTCAATGGCCCCCAGGCAGACTACAGGTAAGTG CTTAGTAGTTCAATGGCCCCCAGGAAGACTACAGGTAAGTG < 41bp 0.407809729748931 0.790276776305507 0.08319563 0.08226898 prediction 0.580553552611015 Functional Gain - MRPL30 ENSG00000185414;ENSG00000241962;ENSG00000273155 CDS Human other chr2:99802704 chr2:99802708 synonymous SNV . 0 25 hm5C_associated_SNPs_102719 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:99802688-99802713
64251 chr17 7577517 7577517 1 - A C BRCA 7577519 - 7577499 7577539 41 CGGAGGCCCATCCTCACCATCATCACACTGGAAGACTCCAG CGGAGGCCCATCCTCACCATCAGCACACTGGAAGACTCCAG < 41bp 0.49805307380652 0.790234378190027 0.07379457 0.17679352 prediction 0.580468756380053 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577519 chr17:7577517 nonsynonymous SNV 0.970 5 23 hm5C_associated_SNPs_102724 7 0 32 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:7577500-7577520
64251 chr2 70315374 70315374 1 + C A READ 70315370 + 70315350 70315390 41 GTCAAGCAGATTTGCCTGGTCATGCTGGAGACGCTCTCCCA GTCAAGCAGATTTGCCTGGTCATGATGGAGACGCTCTCCCA < 41bp 0.59470191222595 0.884931760891957 0.44357905 0.57499266 prediction 0.580459697332014 Functional Gain - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315370 chr2:70315374 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_102725 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:70315327-70315383
64251 chr16 75611255 75611255 1 + T G UCEC 75611252 + 75611232 75611272 41 GTGGCCTACAGCGGAGAGAACACTTTTGGCTTCTGAGGGCC GTGGCCTACAGCGGAGAGAACACGTTTGGCTTCTGAGGGCC < 41bp 0.418314340351291 0.790214838807525 0.35982525 0.4264105 prediction 0.580429677615049 Functional Gain - GABARAPL2 ENSG00000034713 CDS Human protein_coding chr16:75611252 chr16:75611255 synonymous SNV . 0 24 hm5C_associated_SNPs_102726 0 0 30 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:75611174-75611314
64251 chr17 14207654 14207654 1 + C A rs571669286 14207650 + 14207630 14207670 41 GCCCACTGTAAATGCCGCAACTGGCCCCAAACACTGCGTTC GCCCACTGTAAATGCCGCAACTGGACCCAAACACTGCGTTC < 41bp 0.438907253778385 0.790178371950949 0.2872994 0.5650183 prediction 0.580356743901899 Functional Gain - MGC12916 ENSG00000266709 ncRNA_exonic Human lincRNA chr17:14207650 chr17:14207654 . . 0 25 hm5C_associated_SNPs_102730 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:14207648-14207677
64251 chr16 28601750 28601750 1 + C A COAD 28601746 + 28601726 28601766 41 CTGGCCGAGGTGGTCAGTTACAGCCATGCCACCAACAAGTG CTGGCCGAGGTGGTCAGTTACAGCAATGCCACCAACAAGTG < 41bp 0.622370776336247 0.912523269835557 0.6237036 0.7586142 prediction 0.580304986998619 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28601746 chr16:28601750 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_102731 0 0 1 SF3B1 POSTAR2 ENCODE chr16:28601744-28601776
64251 chr5 75948620 75948620 1 + C A rs35366349 75948616 + 75948596 75948636 41 CAACGGAAGGAGTATATGCACAGGCGGCAAACGTTCATTGA CAACGGAAGGAGTATATGCACAGGAGGCAAACGTTCATTGA < 41bp 0.414029510266377 0.790036856216551 0.3005861 0.36422324 prediction 0.580073712433102 Functional Gain - IQGAP2 ENSG00000145703 CDS Human protein_coding chr5:75948616 chr5:75948620 synonymous SNV . 0 25 hm5C_associated_SNPs_102738 0 0 2 LIN28B POSTAR2 ENCODE chr5:75948608-75948661
64251 chr21 34399313 34399313 1 + C G LUSC 34399312 + 34399292 34399332 41 CGTCCACCCCGAGTGACTGCCCGCCGGAGCTGAGCGCCGAG CGTCCACCCCGAGTGACTGCCGGCCGGAGCTGAGCGCCGAG < 41bp 0.490887755715396 0.789884375463069 0.05046898 0.3850642 prediction 0.579768750926137 Functional Gain - OLIG2 ENSG00000205927 CDS Human protein_coding chr21:34399312 chr21:34399313 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_102743 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585675 chr21:34399307-34399332
64251 chr11 60699265 60699265 1 + C G BLCA 60699264 + 60699244 60699284 41 TCACGTGGCAGCTGGAGTACCCAGGCCAGGCCCCTGAAGCA TCACGTGGCAGCTGGAGTACCGAGGCCAGGCCCCTGAAGCA < 41bp 0.513297729199457 0.803175657846865 0.87669057 0.8983104 prediction 0.579755857294816 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60699264 chr11:60699265 nonsynonymous SNV 0.988 1 22 hm5C_associated_SNPs_102745 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:60699258-60699299
64251 chr7 116759737 116759737 1 + T G LUAD 116759734 + 116759714 116759754 41 TCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTC TCTTCCAACAATTCTAATTCCAGGAACGGGGACTCAGATTC < 41bp 0.593816827556959 0.883640089491804 0.038779944 0.29201078 prediction 0.579646523869691 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116759734 chr7:116759737 nonsynonymous SNV 0.886 2 24 hm5C_associated_SNPs_102749 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:116759732-116759759
64251 chr19 15769342 15769342 1 + C A STAD 15769338 + 15769318 15769358 41 AGTGTTTTTGGAACCCATCACAACCCAGCCGTGTGGCCGGA AGTGTTTTTGGAACCCATCACAACACAGCCGTGTGGCCGGA < 41bp 0.372609407559248 0.789750937170637 0.075880975 0.100604415 prediction 0.579501874341275 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15769338 chr19:15769342 nonsynonymous SNV 0.389 4 25 hm5C_associated_SNPs_102754 0 0 2 PPIG POSTAR2 ENCODE chr19:15769323-15769367
64251 chr8 125487370 125487370 1 + C A rs546566054 125487366 + 125487346 125487386 41 GGCTCATGGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCGG GGCTCATGGCGGCCGTGGGGCCCCAGCAGCAGCAGGTGCGG < 41bp 0.423309033140306 0.789731498401871 0.12705502 0.13751623 prediction 0.579462996803742 Functional Gain - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125487366 chr8:125487370 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_102757 0 0 3 DDX3X POSTAR2 ENCODE chr8:125487324-125487384
64251 chr18 72998785 72998785 1 + C G BRCA 72998784 + 72998764 72998804 41 ATCCCACTACCGCCCACCACCCACACGCGGCTGCCGGCCTC ATCCCACTACCGCCCACCACCGACACGCGGCTGCCGGCCTC < 41bp 0.541146327625362 0.83086920663802 0.04039687 0.122807235 prediction 0.579445758025317 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998784 chr18:72998785 nonsynonymous SNV 0.926 1 22 hm5C_associated_SNPs_102758 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:72998785-72998805
64251 chr14 101195327 101195327 1 + C A LUAD 101195323 + 101195303 101195343 41 TGACCAGTGCGTGACCTCTCCCGGCTGCCTTCACGGACTCT TGACCAGTGCGTGACCTCTCCCGGATGCCTTCACGGACTCT < 41bp 0.389922140388072 0.789704178039376 0.73948336 0.57475543 prediction 0.579408356078751 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195323 chr14:101195327 synonymous SNV . 0 25 hm5C_associated_SNPs_102759 0 0 20 DDX3X POSTAR2 ENCODE chr14:101195305-101195349
64251 chr4 100010044 100010044 1 + C A rs29001342 100010040 + 100010020 100010060 41 TGCGTTCCAGGGTGCACTCGCCGGCGAGGCTGCACGGCGCC TGCGTTCCAGGGTGCACTCGCCGGAGAGGCTGCACGGCGCC < 41bp 0.561518800367029 0.851197582913517 0.90048987 0.90809476 prediction 0.579357565092977 Functional Gain - LOC100507053 ENSG00000246090 ncRNA_exonic Human antisense chr4:100010040 chr4:100010044 . . 0 25 hm5C_associated_SNPs_102763 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:100010016-100010048
64251 chr5 126887416 126887416 1 + C A UCEC 126887412 + 126887392 126887432 41 TCCACAGGCTCAAAGTCTAACTCCCCAGGACTATAATCTGA TCCACAGGCTCAAAGTCTAACTCCACAGGACTATAATCTGA < 41bp 0.451982135064032 0.789661730424914 0.0580329 0.94066143 prediction 0.579323460849828 Functional Gain - PRRC1 ENSG00000164244 CDS Human protein_coding chr5:126887412 chr5:126887416 synonymous SNV . 0 25 hm5C_associated_SNPs_102764 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:126887406-126887430
64251 chr17 36918703 36918703 1 + C A PRAD 36918699 + 36918679 36918719 41 TTTGAAACCATCTCCCAAGCCATGCTGAATGCTGTGGACCG TTTGAAACCATCTCCCAAGCCATGATGAATGCTGTGGACCG < 41bp 0.386664627327878 0.789656897043767 0.07151693 0.111932576 prediction 0.579313794087534 Functional Gain - PSMB3 ENSG00000108294 CDS Human other chr17:36918699 chr17:36918703 stopgain 0.999 1 25 hm5C_associated_SNPs_102765 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:36918662-36918737
64251 chr11 607597 607597 1 + T A UCEC 607593 + 607573 607613 41 TCCCCAGTGCCTGCATCAGCCGACTGACTGGCAGGGAGGGC TCCCCAGTGCCTGCATCAGCCGACAGACTGGCAGGGAGGGC < 41bp 0.514761453629639 0.804378151515818 0.33432847 0.333443 prediction 0.579233395772358 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607593 chr11:607597 nonsynonymous SNV 0.343 4 25 hm5C_associated_SNPs_102770 0 0 1 DDX42 POSTAR2 ENCODE chr11:607588-607647
64251 chr7 100469244 100469244 1 + C A STAD 100469240 + 100469220 100469260 41 GGGCTATGGGGAAGGCCTACCACCCTGGCTGCTTCACCTGC GGGCTATGGGGAAGGCCTACCACCATGGCTGCTTCACCTGC < 41bp 0.620266852859408 0.909865197979385 0.28776157 0.45963475 prediction 0.579196690239954 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100469240 chr7:100469244 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_102771 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:100469222-100469300
64251 chr3 133529974 133529974 1 + C A UCEC 133529970 + 133529950 133529990 41 GCCATCCCCAGGGCAATAGTCTGACCTTGATTGACCTTCCC GCCATCCCCAGGGCAATAGTCTGAACTTGATTGACCTTCCC < 41bp 0.380401023895164 0.789578949037391 0.43075404 0.4005615 prediction 0.579157898074781 Functional Gain - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133529970 chr3:133529974 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_102772 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr3:133529963-133529994
64251 chr12 4398109 4398109 1 + T G LUSC 4398107 + 4398087 4398127 41 TGAGGAAGTGAGCTCGCTCACTTGTGATGCCCTGACTGAGC TGAGGAAGTGAGCTCGCTCACTGGTGATGCCCTGACTGAGC < 41bp 0.558767205612044 0.848340344976618 0.11331311 0.47437215 prediction 0.579146278729148 Functional Gain - CCND2 ENSG00000118971 CDS Human protein_coding chr12:4398107 chr12:4398109 nonsynonymous SNV 0.801 0 23 hm5C_associated_SNPs_102773 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:4398071-4398138
64251 chrX 152770291 152770291 1 + C A UCEC 152770287 + 152770267 152770307 41 AGCGCCATGTGTCCTTTCGGCTGCCACTGCCACCTGCGGGT AGCGCCATGTGTCCTTTCGGCTGCAACTGCCACCTGCGGGT < 41bp 0.377009930476149 0.789534825264954 0.10970849 0.11490655 prediction 0.579069650529909 Functional Gain - BGN ENSG00000182492 CDS Human protein_coding chrX:152770287 chrX:152770291 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_102780 0 0 2 RPS3 POSTAR2 ENCODE chrX:152770216-152770295
64251 chr19 18499608 18499608 1 + C G LUSC 18499607 + 18499587 18499627 41 ATCAAGACGAGCCTGCACCGCCTGAAGCCCGACACGGTGCC ATCAAGACGAGCCTGCACCGCGTGAAGCCCGACACGGTGCC < 41bp 0.486753707462968 0.789533666136777 0.28203392 0.4038191 prediction 0.579067332273554 Functional Gain - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499607 chr19:18499608 nonsynonymous SNV 0.017 0 22 hm5C_associated_SNPs_102781 0 0 9 FMR1 POSTAR2 ENCODE chr19:18499600-18499655
64251 chr1 13910431 13910431 1 + C A HNSC 13910427 + 13910407 13910447 41 CTCCGGCCCCCCCACCGTCGCGCTCCTCCAGGCTGGGCCTG CTCCGGCCCCCCCACCGTCGCGCTACTCCAGGCTGGGCCTG < 41bp 0.424906758964477 0.789503403883189 0.07094315 0.21308485 prediction 0.579006807766378 Functional Gain - PDPN ENSG00000162493 CDS Human protein_coding chr1:13910427 chr1:13910431 nonsynonymous SNV 0.009 2 25 hm5C_associated_SNPs_102783 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:13910412-13910441
64251 chr11 118997679 118997679 1 + C G CESC 118997678 + 118997658 118997698 41 CCGCCTCCTGGGAAAGTTCCCCGAAAGGAGAATCTGTGGCT CCGCCTCCTGGGAAAGTTCCCGGAAAGGAGAATCTGTGGCT < 41bp 0.508732881456479 0.79823507294986 0.21394938 0.36007702 prediction 0.579004382986763 Functional Gain - HINFP ENSG00000172273 CDS Human protein_coding chr11:118997678 chr11:118997679 nonsynonymous SNV 0.967 1 22 hm5C_associated_SNPs_102784 0 0 1 BUD13 POSTAR2 ENCODE chr11:118997624-118997691
64251 chr16 30787162 30787162 1 + C A rs556461788 30787158 + 30787138 30787178 41 GCGCCTTCGGACCCTATTGGCGCCCGGGACTTAAGCGGGGC GCGCCTTCGGACCCTATTGGCGCCAGGGACTTAAGCGGGGC < 41bp 0.465901751759319 0.789501656919422 0.7617441 0.8831365 prediction 0.579003313838844 Functional Gain - RNF40 ENSG00000103549 UTR3 Human protein_coding chr16:30787158 chr16:30787162 . . 0 25 hm5C_associated_SNPs_102785 0 0 1 DHX30 POSTAR2 ENCODE chr16:30787154-30787216
64251 chr1 228400271 228400271 1 - G C SKCM 228400272 - 228400252 228400292 41 CCGTCTCGGGCTTGGGCTCGCCGGTCACGTAGCAGCTGAGG CCGTCTCGGGCTTGGGCTCGCGGGTCACGTAGCAGCTGAGG < 41bp 0.506377233260189 0.79585198005506 0.69223684 0.9363853 prediction 0.57894949358974 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228400272 chr1:228400271 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_102792 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228400269-228400301
64251 chr15 40683717 40683717 1 + T G STAD 40683715 + 40683695 40683735 41 TTTAGGCAGTGAGACCCTGGCATCACGACAAGAATCCACTA TTTAGGCAGTGAGACCCTGGCAGCACGACAAGAATCCACTA < 41bp 0.553266661578606 0.842633640461008 0.07342717 0.3616103 prediction 0.578733957764805 Functional Gain - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40683715 chr15:40683717 nonsynonymous SNV 0.091 0 23 hm5C_associated_SNPs_102800 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:40683678-40683734
64251 chr14 23240666 23240666 1 + C G LIHC 23240665 + 23240645 23240685 41 CCTTTACGACAGACCTTTACCCACAACCCTCTCCTACAACC CCTTTACGACAGACCTTTACCGACAACCCTCTCCTACAACC < 41bp 0.493994805410527 0.789364535294423 0.070084274 0.22244725 prediction 0.578729070588845 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23240665 chr14:23240666 nonsynonymous SNV 0.967 4 22 hm5C_associated_SNPs_102801 0 0 17 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:23240652-23240684
64251 chr11 64010748 64010748 1 + C A rs111312054 64010744 + 64010724 64010764 41 CTTTGTCTTCTCCCTTGGCACAGGCCAGGTCATCAAGGGCT CTTTGTCTTCTCCCTTGGCACAGGACAGGTCATCAAGGGCT < 41bp 0.610369824362927 0.89972227396451 0.6470811 0.7502314 prediction 0.578704899203165 Functional Gain - FKBP2 ENSG00000173486 CDS Human protein_coding chr11:64010744 chr11:64010748 synonymous SNV . 0 25 hm5C_associated_SNPs_102802 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:64010721-64010751
64251 chr15 29346197 29346197 1 + C A COAD 29346193 + 29346173 29346213 41 CCGAGAGCGAGGACATGGAGCTGCCCTTGGAGGGCTATGTG CCGAGAGCGAGGACATGGAGCTGCACTTGGAGGGCTATGTG < 41bp 0.388890824610223 0.789325016888808 0.27325296 0.33631122 prediction 0.578650033777616 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346193 chr15:29346197 nonsynonymous SNV 0.037 1 25 hm5C_associated_SNPs_102806 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:29346181-29346202
64251 chr6 13977368 13977368 1 + T G LUSC 13977366 + 13977346 13977386 41 TCAAGATGGCCAGTCAACCTCCTGAAGACACTGCGGAGTCT TCAAGATGGCCAGTCAACCTCCGGAAGACACTGCGGAGTCT < 41bp 0.548476390023102 0.837783247186525 0.103964806 0.5052719 prediction 0.578613714326845 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977366 chr6:13977368 synonymous SNV . 0 23 hm5C_associated_SNPs_102807 0 0 2 YBX3 POSTAR2 ENCODE chr6:13977353-13977410
64251 chr22 25011033 25011033 1 + C A rs191569900 25011029 + 25011009 25011049 41 AAAAGCTGAGGTCATCAACGCCCGCGAGGTGGCCCCCAGGC AAAAGCTGAGGTCATCAACGCCCGAGAGGTGGCCCCCAGGC < 41bp 0.392436182939071 0.78928094532355 0.22762138 0.14898634 prediction 0.5785618906471 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25011029 chr22:25011033 synonymous SNV . 0 25 hm5C_associated_SNPs_102809 0 0 2 PPIG POSTAR2 ENCODE chr22:25011008-25011064
64251 chr7 30655554 30655554 1 + T G OV 30655551 + 30655531 30655571 41 ATTGAGCACTTTGTAGATCCCAGTGAGAAAGACCACCCCAA ATTGAGCACTTTGTAGATCCCAGGGAGAAAGACCACCCCAA < 41bp 0.607565968684884 0.896832796994637 0.42688403 0.8941593 prediction 0.578533656619506 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30655551 chr7:30655554 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_102811 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:30655501-30655585
64251 chr17 61908926 61908926 1 + C A SKCM 61908922 + 61908902 61908942 41 ATGAACCTGACCCGGGGGATCAACCTGAGAAAAATTGCTGA ATGAACCTGACCCGGGGGATCAACATGAGAAAAATTGCTGA < 41bp 0.379733451934603 0.789236788416166 0.7917469 0.7900137 prediction 0.578473576832333 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908922 chr17:61908926 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_102812 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61908872-61908966
64251 chr3 150127731 150127731 1 + C G rs34667041 150127730 + 150127710 150127750 41 CAGCAGCGTCCTGACTAGATCCGGGGATTGCATTAGACACA CAGCAGCGTCCTGACTAGATCGGGGGATTGCATTAGACACA < 41bp 0.493850600723433 0.789182663205464 0.89839244 0.92979395 prediction 0.578365326410929 Functional Gain - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127730 chr3:150127731 synonymous SNV . 0 22 hm5C_associated_SNPs_102816 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:150127704-150127757
64251 chr2 238006812 238006812 1 + T G rs535023743 238006809 + 238006789 238006829 41 CCCAGGCACAGTATCTGAATCACTGGGGATTATGATTCACC CCCAGGCACAGTATCTGAATCACGGGGGATTATGATTCACC < 41bp 0.588859804074368 0.878019769606288 0.09086943 0.3835161 prediction 0.57831993106384 Functional Gain - COPS8 ENSG00000198612 UTR3 Human protein_coding chr2:238006809 chr2:238006812 . . 0 24 hm5C_associated_SNPs_102820 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:238006529-238006822
64251 chr17 4930813 4930813 1 + C A rs147330206 4930809 + 4930789 4930829 41 GCTCAAGCAATCCTGCCTCCCAAGCCAAGCAGCTGGTACTG GCTCAAGCAATCCTGCCTCCCAAGACAAGCAGCTGGTACTG < 41bp 0.544472507384145 0.833572784915336 0.30206192 0.39810887 prediction 0.578200555062381 Functional Gain - KIF1C ENSG00000129250 UTR3 Human protein_coding chr17:4930809 chr17:4930813 . . 0 25 hm5C_associated_SNPs_102822 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:4930801-4930829
64251 chr11 375882 375882 1 + C A UCEC 375878 + 375858 375898 41 GAATCTTCGAGCCTGGAGAACGTGCTGGAGCCCTGCGCCTA GAATCTTCGAGCCTGGAGAACGTGATGGAGCCCTGCGCCTA < 41bp 0.401926704256116 0.78909058886814 0.45398438 0.5332969 prediction 0.578181177736281 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:375878 chr11:375882 nonsynonymous SNV 0.934 2 25 hm5C_associated_SNPs_102824 0 0 2 GRWD1 POSTAR2 ENCODE chr11:375864-375902
64251 chr7 76112246 76112246 1 + C G rs151329883 76112245 + 76112225 76112265 41 ATACCCCGTCCCCCAGCACCCCCCACACAGGACCGCTTCTG ATACCCCGTCCCCCAGCACCCGCCACACAGGACCGCTTCTG < 41bp 0.508352371754563 0.797437991770638 0.011272699 0.11092457 prediction 0.578171240032149 Functional Gain - DTX2 ENSG00000091073 CDS Human protein_coding chr7:76112245 chr7:76112246 synonymous SNV . 0 22 hm5C_associated_SNPs_102826 0 0 1 RBM15 POSTAR2 ENCODE chr7:76112149-76112250
64251 chr8 67341481 67341481 1 + C A rs116590536 67341477 + 67341457 67341497 41 GAGCTGCAGTTTGACCTGGGCAACCTGCTGGCGTCGGACCG GAGCTGCAGTTTGACCTGGGCAACATGCTGGCGTCGGACCG < 41bp 0.420679424786877 0.789085179087825 0.33440602 0.31619182 prediction 0.57817035817565 Functional Gain - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341477 chr8:67341481 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102827 0 0 1 RPS3 POSTAR2 ENCODE chr8:67341464-67341534
64251 chr20 35865030 35865030 1 + C G OV 35865029 + 35865009 35865049 41 TGGACTCAGCTCAACATGTTCCAGACCTTGAAGTACCTGGC TGGACTCAGCTCAACATGTTCGAGACCTTGAAGTACCTGGC < 41bp 0.49112223390148 0.789076680636968 0.057281137 0.15813276 prediction 0.578153361273937 Functional Gain - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35865029 chr20:35865030 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_102828 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:35864993-35865031
64251 chr6 44200586 44200586 1 + C G THYM 44200585 + 44200565 44200605 41 CTGCCAAGCCTGGTGCTGGCCCGGCTGGTGTTTGTGCCACT CTGCCAAGCCTGGTGCTGGCCGGGCTGGTGTTTGTGCCACT < 41bp 0.493730669460374 0.789058308024936 0.03978911 0.4590224 prediction 0.578116616049871 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200585 chr6:44200586 nonsynonymous SNV 0.101 5 22 hm5C_associated_SNPs_102829 0 0 5 LIN28B POSTAR2 ENCODE chr6:44200540-44200610
64251 chr16 1877416 1877416 1 + C G rs143728918 1877415 + 1877395 1877435 41 GGGCTCGCCCATCCTCATGCCCGCGTACACTCGCAACCTGC GGGCTCGCCCATCCTCATGCCGGCGTACACTCGCAACCTGC < 41bp 0.523880734169911 0.812897105988112 0.12345672 0.43121347 prediction 0.578032743636403 Functional Gain - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877415 chr16:1877416 synonymous SNV . 0 22 hm5C_associated_SNPs_102834 0 0 1 RPS3 POSTAR2 ENCODE chr16:1877360-1877426
64251 chr2 73471724 73471724 1 + C A PAAD 73471720 + 73471700 73471740 41 GCCATGACCGCTCTGAGCTCCAAGCTGATCTCCCAGCAGAA GCCATGACCGCTCTGAGCTCCAAGATGATCTCCCAGCAGAA < 41bp 0.393148970982377 0.788970975102537 0.38914588 0.31136283 prediction 0.577941950205075 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471720 chr2:73471724 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_102836 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:73471678-73471738
64251 chr13 22245385 22245385 1 + C A rs547446043 22245381 + 22245361 22245401 41 CGTTCTAAGCCAATGGACATCTGCCGAGCCTCTGGAGAATC CGTTCTAAGCCAATGGACATCTGCAGAGCCTCTGGAGAATC < 41bp 0.424210792330799 0.788931473964027 0.08109763 0.26049823 prediction 0.577862947928054 Functional Gain - FGF9 ENSG00000102678 upstream Human protein_coding chr13:22245381 chr13:22245385 . . 0 25 hm5C_associated_SNPs_102838 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr13:22245369-22245397
64251 chr20 44746996 44746996 1 + C A UCEC 44746992 + 44746972 44747012 41 CTCACCTCGCTATGGTTCGTCTGCCTCTGCAGTGCGTCCTC CTCACCTCGCTATGGTTCGTCTGCATCTGCAGTGCGTCCTC < 41bp 0.402733372172027 0.788863077891886 0.2794179 0.31014657 prediction 0.577726155783772 Functional Gain - CD40 ENSG00000101017 CDS Human protein_coding chr20:44746992 chr20:44746996 nonsynonymous SNV 0.004 3 25 hm5C_associated_SNPs_102844 0 0 1 DDX3X POSTAR2 ENCODE chr20:44746983-44747032
64251 chr5 153429380 153429380 1 + T G SKCM 153429377 + 153429357 153429397 41 GGACTTCGACCAAATGGTTTCACTGGAAGCAAATCGTAGTT GGACTTCGACCAAATGGTTTCACGGGAAGCAAATCGTAGTT < 41bp 0.42447391445244 0.788859733601977 0.14608884 0.23462978 prediction 0.577719467203955 Functional Gain - MFAP3 ENSG00000037749 CDS Human protein_coding chr5:153429377 chr5:153429380 nonsynonymous SNV 0.857 0 24 hm5C_associated_SNPs_102845 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:153429375-153429399
64251 chr1 64104434 64104434 1 + C A rs200407907 64104430 + 64104410 64104450 41 TTTTGGGAATTTGATGGACGCGAGCAAACTGTCCCTTTGTG TTTTGGGAATTTGATGGACGCGAGAAAACTGTCCCTTTGTG < 41bp 0.383891617679871 0.788852634657671 0.6406379 0.8127621 prediction 0.577705269315341 Functional Gain - PGM1 ENSG00000079739 CDS Human protein_coding chr1:64104430 chr1:64104434 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_102846 3 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:64104416-64104434
64251 chr3 50388901 50388901 1 + C A COAD 50388897 + 50388877 50388917 41 GCGGAGACCGAGTCACACATCTACCGAGCTCTGCGTACTGC GCGGAGACCGAGTCACACATCTACAGAGCTCTGCGTACTGC < 41bp 0.619726534413932 0.908551466414581 0.23495862 0.7802248 prediction 0.577649864001298 Functional Gain - CYB561D2 ENSG00000114395;ENSG00000272104 CDS Human other chr3:50388897 chr3:50388901 synonymous SNV . 0 25 hm5C_associated_SNPs_102850 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:50388888-50388916
64251 chr10 72633294 72633294 1 + T A LUAD 72633290 + 72633270 72633310 41 TTGATGCACTTCGGTGAGAACGGCTATGTTGAAGCTACCAA TTGATGCACTTCGGTGAGAACGGCAATGTTGAAGCTACCAA < 41bp 0.550041797540271 0.838835859594609 0.2840485 0.29238367 prediction 0.577588124108676 Functional Gain - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72633290 chr10:72633294 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102855 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:72633272-72633297
64251 chr5 170863108 170863108 1 + C G STAD 170863107 + 170863087 170863127 41 CCCTGCCCAGGTGCTGGTTGCCGAGGAGAACGTGGACTTCC CCCTGCCCAGGTGCTGGTTGCGGAGGAGAACGTGGACTTCC < 41bp 0.526812046302198 0.815596581551245 0.9142431 0.93182784 prediction 0.577569070498095 Functional Gain - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170863107 chr5:170863108 synonymous SNV . 0 22 hm5C_associated_SNPs_102857 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:170863100-170863120
64251 chr11 65384727 65384727 1 + C G rs12790427 65384726 + 65384706 65384746 41 CTTTTTCACCGCCAGGGACCCCGGAGTGGAGATGACAGTGT CTTTTTCACCGCCAGGGACCCGGGAGTGGAGATGACAGTGT < 41bp 0.518666779311102 0.807417006827338 0.39987135 0.8884032 prediction 0.577500455032471 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65384726 chr11:65384727 synonymous SNV . 0 22 hm5C_associated_SNPs_102863 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65384723-65384757
64251 chr5 133873698 133873698 1 + C G SKCM 133873697 + 133873677 133873717 41 AGGTCATGCGACATCTACATCCGCATCAAGATGCTCCAAAC AGGTCATGCGACATCTACATCGGCATCAAGATGCTCCAAAC < 41bp 0.512881741992376 0.801605549675531 0.15401936 0.703517 prediction 0.577447615366309 Functional Gain - JADE2 ENSG00000043143 CDS Human protein_coding chr5:133873697 chr5:133873698 synonymous SNV . 0 22 hm5C_associated_SNPs_102866 0 0 1 PPIG POSTAR2 ENCODE chr5:133873696-133873775
64251 chr4 76714942 76714942 1 + C A SKCM 76714938 + 76714918 76714958 41 GTGCTGCTGTGGCCCTTGCCCATGCGTTGCAAGAAAATGCC GTGCTGCTGTGGCCCTTGCCCATGAGTTGCAAGAAAATGCC < 41bp 0.393277658895674 0.788676910208335 0.11848706 0.1017966 prediction 0.57735382041667 Functional Gain - USO1 ENSG00000138768 CDS Human protein_coding chr4:76714938 chr4:76714942 nonsynonymous SNV 0.534 3 25 hm5C_associated_SNPs_102870 0 0 2 FXR2 POSTAR2 ENCODE chr4:76714907-76714959
64251 chr21 34793916 34793916 1 + T G UCEC 34793913 + 34793893 34793933 41 TTCCCAATGGATTTCAATGTCACTCTACGCCTTCGAGCTGA TTCCCAATGGATTTCAATGTCACGCTACGCCTTCGAGCTGA < 41bp 0.401023308751188 0.788616965343929 0.22539943 0.19178158 prediction 0.577233930687857 Functional Gain - IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34793913 chr21:34793916 synonymous SNV . 0 24 hm5C_associated_SNPs_102873 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:34793868-34793965
64251 chr20 39986973 39986973 1 + C A UCEC 39986969 + 39986949 39986989 41 CCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCA CCACGGACAGCCCTTCTATGCTGCATTTGGGAATAGGCCCA < 41bp 0.368027577031071 0.788579521372609 0.089746475 0.07826114 prediction 0.577159042745217 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39986969 chr20:39986973 synonymous SNV . 0 25 hm5C_associated_SNPs_102876 0 0 4 GRWD1 POSTAR2 ENCODE chr20:39986947-39986986
64251 chr20 61919233 61919233 1 + T G rs540954738 61919230 + 61919210 61919250 41 CAACCAGAACTGGTAGGGCCCACTGCGCCCCCGTCCCCAGC CAACCAGAACTGGTAGGGCCCACGGCGCCCCCGTCCCCAGC < 41bp 0.410632797384752 0.788561010204706 0.13267243 0.47528931 prediction 0.577122020409412 Functional Gain - ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61919230 chr20:61919233 . . 0 24 hm5C_associated_SNPs_102877 0 0 5 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr20:61919220-61919240
64251 chr1 29639188 29639188 1 + C G LUAD 29639187 + 29639167 29639207 41 GCGTGAAGGCCTCCACCCCACCTGATGCCGGGCCCATTGTC GCGTGAAGGCCTCCACCCCACGTGATGCCGGGCCCATTGTC < 41bp 0.494996766082454 0.788489238097592 0.062181532 0.18460959 prediction 0.576978476195184 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29639187 chr1:29639188 nonsynonymous SNV 0.952 4 22 hm5C_associated_SNPs_102881 0 0 1 RPS3 POSTAR2 ENCODE chr1:29639188-29639219
64251 chr12 8926135 8926135 1 + C A THCA 8926131 + 8926111 8926151 41 ATCATAGCAGACTATGCCGCCTCCCTTCTACCCTCTGGCCG ATCATAGCAGACTATGCCGCCTCCATTCTACCCTCTGGCCG < 41bp 0.378436629858327 0.7884428531009 0.021045774 0.9413673 prediction 0.576885706201799 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926131 chr12:8926135 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_102888 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:8926099-8926160
64251 chr7 127326753 127326753 1 + T G SKCM 127326751 + 127326731 127326771 41 AGATCAACCTCAGCAACATTCGTGCTGGAAATCTTGCTCGC AGATCAACCTCAGCAACATTCGGGCTGGAAATCTTGCTCGC < 41bp 0.545536825287943 0.833936182892828 0.502811 0.9286048 prediction 0.57679871520977 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127326751 chr7:127326753 synonymous SNV . 0 23 hm5C_associated_SNPs_102893 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:127326719-127326757
64251 chr11 34988219 34988219 1 + C A OV 34988215 + 34988195 34988235 41 TCAAACTTGTCCAGTTGAAACAAACGGGCAAGATTACCGAG TCAAACTTGTCCAGTTGAAACAAAAGGGCAAGATTACCGAG < 41bp 0.391168507891842 0.788343935918341 0.08751467 0.11740771 prediction 0.576687871836681 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34988215 chr11:34988219 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_102897 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:34988196-34988228
64251 chr16 57788877 57788877 1 + C A LAML 57788873 + 57788853 57788893 41 GCAAAGGAGGCAGCAAAGCCCAGCCCTGCCATGGATGTGCA GCAAAGGAGGCAGCAAAGCCCAGCACTGCCATGGATGTGCA < 41bp 0.376458130809991 0.788327132350498 0.23264298 0.27595216 prediction 0.576654264700996 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57788873 chr16:57788877 nonsynonymous SNV 0.913 0 25 hm5C_associated_SNPs_102898 0 0 1 U2AF2 POSTAR2 ENCODE chr16:57788830-57788890
64251 chr19 47770032 47770032 1 + C G rs60383222 47770031 + 47770011 47770051 41 GTGGAGGCGCGAGTGGGATGCCGAGAAGACCGATGGGATGT GTGGAGGCGCGAGTGGGATGCGGAGAAGACCGATGGGATGT < 41bp 0.522186513299511 0.810386234588913 0.6932428 0.9000595 prediction 0.576399442578803 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47770031 chr19:47770032 synonymous SNV . 0 22 hm5C_associated_SNPs_102906 0 0 2 SRSF1 POSTAR2 ENCODE chr19:47769948-47770054
64251 chr2 109411018 109411018 1 + C A LGG 109411014 + 109410994 109411034 41 AGTTGCCTTGCCAACTAATACGACCTCATCGAGACCTCGGA AGTTGCCTTGCCAACTAATACGACATCATCGAGACCTCGGA < 41bp 0.393894510636818 0.788191913839742 0.03802538 0.05428505 prediction 0.576383827679485 Functional Gain - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109411014 chr2:109411018 synonymous SNV . 0 25 hm5C_associated_SNPs_102907 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:109411000-109411020
64251 chr3 52233326 52233326 1 + C A LAML 52233322 + 52233302 52233342 41 CCAGGCCTTTCTGCAGAAAGCAGGCAAATCTCTGTTGTTCT CCAGGCCTTTCTGCAGAAAGCAGGAAAATCTCTGTTGTTCT < 41bp 0.612376251631889 0.900522195366866 0.71279985 0.6238295 prediction 0.576291887469954 Functional Gain - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233322 chr3:52233326 synonymous SNV . 0 25 hm5C_associated_SNPs_102912 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:52233317-52233336
64251 chr1 228362513 228362513 1 + C A rs148398789 228362509 + 228362489 228362529 41 GCGGAAGGTCACGGTGGAGCCGCACCCGGAGCTGCGAGTGT GCGGAAGGTCACGGTGGAGCCGCAACCGGAGCTGCGAGTGT < 41bp 0.397923468075854 0.788140583241606 0.19196135 0.49650204 prediction 0.576281166483212 Functional Gain - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228362509 chr1:228362513 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_102913 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:228362502-228362524
64251 chr1 41236498 41236498 1 + T A UCEC 41236494 + 41236474 41236514 41 CAGGCCCCCCAGGTGACCGGCGACTGAGGGCCTGAGCTGGC CAGGCCCCCCAGGTGACCGGCGACAGAGGGCCTGAGCTGGC < 41bp 0.485867711387724 0.788136214848128 0.45351195 0.7403736 prediction 0.576272429696255 Functional Gain - NFYC ENSG00000066136 CDS Human protein_coding chr1:41236494 chr1:41236498 stoploss 1.000 0 25 hm5C_associated_SNPs_102914 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:41236480-41236500
64251 chr3 127325501 127325501 1 + C A LIHC 127325497 + 127325477 127325517 41 CCGCACCAGTGGGGTGGTGACCAGCTGCACTGGCGTCCTGC CCGCACCAGTGGGGTGGTGACCAGATGCACTGGCGTCCTGC < 41bp 0.38961685984914 0.788096171928522 0.8958321 0.921178 prediction 0.576192343857043 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325497 chr3:127325501 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_102917 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:127325483-127325516
64251 chr7 140373447 140373447 1 + T G LUAD 140373444 + 140373424 140373464 41 CCTCTGGCTTCGCGCCGGCGCTCTGTTGGTGAAATTCTTCC CCTCTGGCTTCGCGCCGGCGCTCGGTTGGTGAAATTCTTCC < 41bp 0.406977909453374 0.78809259826672 0.09773901 0.14825681 prediction 0.576185196533439 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373444 chr7:140373447 nonsynonymous SNV 0.043 4 24 hm5C_associated_SNPs_102918 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:140373416-140373451
64251 chr3 52740186 52740186 1 + T G STAD 52740184 + 52740164 52740204 41 GCGCAGTGCCAGACCTTACCCCTCACGGTCCTTAAGTCTCG GCGCAGTGCCAGACCTTACCCCGCACGGTCCTTAAGTCTCG < 41bp 0.557665995097082 0.845758453493767 0.03351584 0.07903588 prediction 0.57618491679337 Functional Gain - SPCS1 ENSG00000114902 CDS Human protein_coding chr3:52740184 chr3:52740186 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_102919 0 0 18 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:52740171-52740192
64251 chr16 31213851 31213851 1 + T A ACC 31213847 + 31213827 31213867 41 TCCAGGTAGAAGCTGACCAGCTTGTCGGTGAGGTCCAAGGC TCCAGGTAGAAGCTGACCAGCTTGACGGTGAGGTCCAAGGC < 41bp 0.482489289325016 0.788076094486233 0.3878015 0.4206862 prediction 0.576152188972467 Functional Gain - PYCARD ENSG00000103490;ENSG00000261359 CDS Human other chr16:31213847 chr16:31213851 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_102924 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:31213784-31213888
64251 chr1 155106494 155106494 1 + T G SKCM 155106491 + 155106471 155106511 41 TGCTGCCCCACGCCTCTTCCCACTTGCCTGGACTGTGCTGC TGCTGCCCCACGCCTCTTCCCACGTGCCTGGACTGTGCTGC < 41bp 0.408781992257519 0.788058784673838 0.3032372 0.87900364 prediction 0.576117569347677 Functional Gain - EFNA1 ENSG00000169242 CDS Human protein_coding chr1:155106491 chr1:155106494 nonsynonymous SNV 0.987 2 24 hm5C_associated_SNPs_102925 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:155106459-155106497
64251 chrX 55030265 55030265 1 + C A CESC 55030261 + 55030241 55030281 41 CATTCTGGGTGACCTGAATACAGCCCACCGCCCCATTGACC CATTCTGGGTGACCTGAATACAGCACACCGCCCCATTGACC < 41bp 0.370308318176757 0.788050977217682 0.10879761 0.06545383 prediction 0.576101954435364 Functional Gain - APEX2 ENSG00000169188 CDS Human protein_coding chrX:55030261 chrX:55030265 synonymous SNV . 0 25 hm5C_associated_SNPs_102926 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:55030247-55030266
64251 chr12 2930009 2930009 1 + T A STAD 2930005 + 2929985 2930025 41 GAAAAAGGACACTGGGTCCCCTCCTGCCTCTGAAGGGCCCA GAAAAAGGACACTGGGTCCCCTCCAGCCTCTGAAGGGCCCA < 41bp 0.569299636076202 0.857280222043948 0.08927694 0.9330745 prediction 0.575961171935491 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2930005 chr12:2930009 synonymous SNV . 0 25 hm5C_associated_SNPs_102935 0 0 2 PPIG POSTAR2 ENCODE chr12:2929989-2930023
64251 chr10 131565073 131565073 1 + C G BLCA 131565072 + 131565052 131565092 41 GTCCCCATCCTCATCCCGTGCCACAGAGTGGTCTGCAGCAG GTCCCCATCCTCATCCCGTGCGACAGAGTGGTCTGCAGCAG < 41bp 0.497777584027998 0.787970988482053 0.08517516 0.16437697 prediction 0.575941976964107 Functional Gain - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565072 chr10:131565073 nonsynonymous SNV 0.390 4 22 hm5C_associated_SNPs_102936 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:131565073-131565074
64251 chr8 21958174 21958174 1 + C A UCEC 21958170 + 21958150 21958190 41 CCCCACGAGGGGATCATCCACAGCCTGGTCCTGCGCAACCT CCCCACGAGGGGATCATCCACAGCATGGTCCTGCGCAACCT < 41bp 0.621989171713718 0.909913840602132 0.73300815 0.7280913 prediction 0.575849337776828 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958170 chr8:21958174 nonsynonymous SNV 0.021 2 25 hm5C_associated_SNPs_102942 0 0 4 PPIG POSTAR2 ENCODE chr8:21958129-21958212
64251 chr1 161480706 161480706 1 + T A BLCA 161480702 + 161480682 161480722 41 TGCTGTAGCAGCCATTGTTGCTGCTGTAGTGGCCTTGATCT TGCTGTAGCAGCCATTGTTGCTGCAGTAGTGGCCTTGATCT < 41bp 0.53359297740455 0.821515099507754 0.21938625 0.26807293 prediction 0.575844244206408 Functional Gain - FCGR2A ENSG00000143226 CDS Human protein_coding chr1:161480702 chr1:161480706 synonymous SNV . 0 25 hm5C_associated_SNPs_102944 0 0 2 SND1 POSTAR2 ENCODE chr1:161480650-161480718
64251 chr10 99211445 99211445 1 + C A UCEC 99211441 + 99211421 99211461 41 CTCGTAGGAACCATGCGAGGCCAGCGGAGCCTGCTGCTGGG CTCGTAGGAACCATGCGAGGCCAGAGGAGCCTGCTGCTGGG < 41bp 0.405301443820527 0.787853901730401 0.71758926 0.930196 prediction 0.575707803460802 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211441 chr10:99211445 synonymous SNV . 0 25 hm5C_associated_SNPs_102953 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:99211425-99211465
64251 chr12 53680055 53680055 1 + C G BRCA 53680054 + 53680034 53680074 41 CTGGCCATGGGCCACCAAGCCCAGGGTCTGGATCTGCTGCA CTGGCCATGGGCCACCAAGCCGAGGGTCTGGATCTGCTGCA < 41bp 0.491828787215965 0.787842071219675 0.8785963 0.8918863 prediction 0.57568414243935 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53680054 chr12:53680055 nonsynonymous SNV 0.980 0 22 hm5C_associated_SNPs_102954 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:53680054-53680055
64251 chr9 120475977 120475977 1 + T A BRCA 120475973 + 120475953 120475993 41 TTAACTCACTCTCCAGTCTTCAGGTACTAAATATGAGCCAC TTAACTCACTCTCCAGTCTTCAGGAACTAAATATGAGCCAC < 41bp 0.500889945657725 0.788688206272188 0.8328363 0.8589269 prediction 0.575596521228927 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120475973 chr9:120475977 nonsynonymous SNV 0.008 0 25 hm5C_associated_SNPs_102959 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:120475976-120476016
64251 chr1 28864616 28864616 1 + C A rs577542748 28864612 + 28864592 28864632 41 GATGGCAGCGGGCCTCTCCCCAGCCCTGAGCACTGTGTCAG GATGGCAGCGGGCCTCTCCCCAGCACTGAGCACTGTGTCAG < 41bp 0.606555816700978 0.894352116098055 0.37803453 0.37926722 prediction 0.575592598794154 Functional Gain - RCC1 ENSG00000180198 UTR3 Human protein_coding chr1:28864612 chr1:28864616 . . 0 25 hm5C_associated_SNPs_102960 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28864505-28864630
64251 chr6 351192 351192 1 + C A rs547349236 351188 + 351168 351208 41 CTGTGAACGCCTCCCAAGGACGAGCCCAGTGTAGTTGTGTG CTGTGAACGCCTCCCAAGGACGAGACCAGTGTAGTTGTGTG < 41bp 0.488134663970252 0.787679031145114 0.15879875 0.20850247 prediction 0.575358062290227 Functional Gain - DUSP22 ENSG00000112679 UTR3 Human protein_coding chr6:351188 chr6:351192 . . 0 25 hm5C_associated_SNPs_102966 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:350957-351335
64251 chr5 10256161 10256161 1 + T A rs1042392 10256157 + 10256137 10256177 41 CGATGGCTATGAGCAGGCTGCTCGTGTTGCTATTGAACACC CGATGGCTATGAGCAGGCTGCTCGAGTTGCTATTGAACACC < 41bp 0.551174819737981 0.838803010327396 0.16965804 0.31038547 prediction 0.575256381178831 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10256157 chr5:10256161 synonymous SNV . 0 25 hm5C_associated_SNPs_102974 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:10256160-10256180
64251 chr15 79603747 79603747 1 + C G LUSC 79603746 + 79603726 79603766 41 GGAGCAGGGCGTGAAGTTCTCCCTGGATTACCAGGTGAGGC GGAGCAGGGCGTGAAGTTCTCGCTGGATTACCAGGTGAGGC < 41bp 0.507775745317802 0.795403642765582 0.08158517 0.13980046 prediction 0.57525579489556 Functional Gain - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79603746 chr15:79603747 synonymous SNV . 0 22 hm5C_associated_SNPs_102975 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79603716-79603752
64251 chr7 102065641 102065641 1 + C A rs559937833 102065637 + 102065617 102065657 41 GCGGCTGTTTGGCTCTTTCTCCCCCGCAAGGACCCGCTGAC GCGGCTGTTTGGCTCTTTCTCCCCAGCAAGGACCCGCTGAC < 41bp 0.402153101897135 0.787609736440575 0.21140614 0.20330477 prediction 0.575219472881151 Functional Gain - LOC100630923 ENSG00000128563 CDS Human protein_coding chr7:102065637 chr7:102065641 synonymous SNV . 0 25 hm5C_associated_SNPs_102977 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:102065617-102065642
64251 chr17 30615952 30615952 1 + C G LUSC 30615951 + 30615931 30615971 41 GTGGCCTATGAGACCCTGCCCCGGGAAATTGACCGCAAGTG GTGGCCTATGAGACCCTGCCCGGGGAAATTGACCGCAAGTG < 41bp 0.486591017746214 0.787579398207189 0.5936375 0.93426704 prediction 0.575158796414378 Functional Gain - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30615951 chr17:30615952 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_102978 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:30615942-30615976
64251 chr19 33605316 33605316 1 + C G rs148807065 33605315 + 33605295 33605335 41 AGAGCATGCACCAGAATTATCCGCAAATCAGGTATTTGGGG AGAGCATGCACCAGAATTATCGGCAAATCAGGTATTTGGGG < 41bp 0.502705508085768 0.790273618243776 0.20093188 0.90287703 prediction 0.575136220316015 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33605315 chr19:33605316 synonymous SNV . 0 22 hm5C_associated_SNPs_102981 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:33605286-33605324
64251 chr14 23982470 23982470 1 + C A rs534173879 23982466 + 23982446 23982486 41 GGGCCATCGTCTGCCTCCATCACCCCTCCGCCCGCCCGCCT GGGCCATCGTCTGCCTCCATCACCACTCCGCCCGCCCGCCT < 41bp 0.442220273320196 0.787525246732598 0.08047491 0.14567778 prediction 0.575050493465196 Functional Gain - NGDN;ZFHX2 ENSG00000157306 ncRNA_exonic Human processed_transcript chr14:23982466 chr14:23982470 . . 0 25 hm5C_associated_SNPs_102986 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:23982454-23982485
64251 chr16 1412245 1412245 1 + T A rs147109185 1412241 + 1412221 1412261 41 TGGAAAAAGCAACCGGCTGGCCCATGTGTCCGAGCCGAGCA TGGAAAAAGCAACCGGCTGGCCCAAGTGTCCGAGCCGAGCA < 41bp 0.478228516007597 0.787481398173243 0.01765725 0.016095221 prediction 0.574962796346486 Functional Gain - GNPTG ENSG00000090581 CDS Human protein_coding chr16:1412241 chr16:1412245 nonsynonymous SNV 0.959 1 25 hm5C_associated_SNPs_102989 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1412227-1412269
64251 chr11 76507531 76507531 1 + C G LUSC 76507530 + 76507510 76507550 41 CTGGACCTTTCGGGCACCAACCTGGTGCCCCTGCCTGAGGC CTGGACCTTTCGGGCACCAACGTGGTGCCCCTGCCTGAGGC < 41bp 0.533111342742736 0.820587697470807 0.52848744 0.93232465 prediction 0.574952709456141 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507530 chr11:76507531 nonsynonymous SNV 0.017 1 22 hm5C_associated_SNPs_102991 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:76507503-76507574
64251 chr7 150069006 150069006 1 + C G rs200191877 150069005 + 150068985 150069025 41 CGCCCCGCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGT CGCCCCGCGGTGACCGCCCCCGGGCCCGGTGGAGATGCCGT < 41bp 0.499087557650058 0.787470352824559 0.12713078 0.8070516 prediction 0.574940705649118 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069005 chr7:150069006 nonsynonymous SNV 0.355 0 22 hm5C_associated_SNPs_102992 0 0 5 DDX3X POSTAR2 ENCODE chr7:150068987-150069007
64251 chr8 42179668 42179668 1 + T A UCEC 42179664 + 42179644 42179684 41 AAGTGCGAGTGATCTATACGCAGCTCAGGTATGAGCCCCGA AAGTGCGAGTGATCTATACGCAGCACAGGTATGAGCCCCGA < 41bp 0.486116354973312 0.787372038015702 0.27244937 0.22342885 prediction 0.574744076031404 Functional Gain - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42179664 chr8:42179668 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_103003 0 0 4 BUD13 POSTAR2 ENCODE chr8:42179604-42179668
64251 chr20 5297197 5297197 1 - A C rs191193149 5297200 - 5297180 5297220 41 CCCGCCTGCGCCCAACCACACTGTGACTCTCGATCCGGCTT CCCGCCTGCGCCCAACCACACTGGGACTCTCGATCCGGCTT < 41bp 0.535154429184131 0.822517155363076 0.32564855 0.8839022 prediction 0.57472545235789 Functional Gain - PROKR2 ENSG00000101292 UTR5 Human protein_coding chr20:5297200 chr20:5297197 . . 0 24 hm5C_associated_SNPs_103005 0 0 1 WTAP POSTAR2 GSE46705,GSM1135010 chr20:5297181-5297197
64251 chr10 133769848 133769848 1 + C A rs7199 133769844 + 133769824 133769864 41 CTCCAACTTTCCCTCTTTCTCTGCCATCACACTTGGGCCTT CTCCAACTTTCCCTCTTTCTCTGCAATCACACTTGGGCCTT < 41bp 0.5978504966403 0.885183156571447 0.4474714 0.79891896 prediction 0.574665319862296 Functional Gain - PPP2R2D ENSG00000175470 UTR3 Human protein_coding chr10:133769844 chr10:133769848 . . 0 25 hm5C_associated_SNPs_103009 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:133769820-133769860
64251 chr1 101705367 101705367 1 + T A LUSC 101705363 + 101705343 101705383 41 GCTGGGCACCGCTCTTCATCCTGCTCCTGCTGGATGTGGGC GCTGGGCACCGCTCTTCATCCTGCACCTGCTGGATGTGGGC < 41bp 0.558802750325298 0.846060403662935 0.06912634 0.103260905 prediction 0.574515306675273 Functional Gain - S1PR1 ENSG00000170989 CDS Human protein_coding chr1:101705363 chr1:101705367 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_103018 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:101705367-101705368
64251 chrX 142967242 142967242 1 + C A COAD 142967238 + 142967218 142967258 41 CACAGGATCATCAAGGAAACCCAGCGTTTGCTGGCAGAGCC CACAGGATCATCAAGGAAACCCAGAGTTTGCTGGCAGAGCC < 41bp 0.593784638962192 0.88102789459322 0.078410655 0.20357803 prediction 0.574486511262055 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967238 chrX:142967242 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_103020 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:142967220-142967245
64251 chr16 56782311 56782311 1 + C A rs573467287 56782307 + 56782287 56782327 41 TGCGTTCCCGTACCCTAACACGCACGTCCCAGGAGACGGCA TGCGTTCCCGTACCCTAACACGCAAGTCCCAGGAGACGGCA < 41bp 0.39265856171506 0.787192771560695 0.18032372 0.16296232 prediction 0.57438554312139 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56782307 chr16:56782311 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_103025 0 0 1 GRWD1 POSTAR2 ENCODE chr16:56782235-56782345
64251 chr12 102558286 102558286 1 + C A UCEC 102558282 + 102558262 102558302 41 TAGTGAATTCAAAGAATGACCTGGCTGTGGCTTATATTCTC TAGTGAATTCAAAGAATGACCTGGATGTGGCTTATATTCTC < 41bp 0.415088834220583 0.787164442536202 0.04232171 0.084237695 prediction 0.574328885072405 Functional Gain - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102558282 chr12:102558286 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_103028 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102558257-102558286
64251 chr19 14070103 14070103 1 + C A LUAD 14070099 + 14070079 14070119 41 GCGGGGTCCCTGAGGAAGCCCGGCCTGCCCTGTGCCCAGGA GCGGGGTCCCTGAGGAAGCCCGGCATGCCCTGTGCCCAGGA < 41bp 0.621416732721471 0.908575503495873 0.72095865 0.85129213 prediction 0.574317541548804 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070099 chr19:14070103 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_103029 0 0 1 RPS3 POSTAR2 ENCODE chr19:14070075-14070142
64251 chr16 731823 731823 1 - G T GBM 731827 - 731807 731847 41 GACGTGGCTGTCGTCCTCATCACCCTCGTGGTTTCGCTGGC GACGTGGCTGTCGTCCTCATCACCATCGTGGTTTCGCTGGC < 41bp 0.583924389700003 0.871040314492149 0.11807725 0.12510243 prediction 0.574231849584293 Functional Gain - STUB1 ENSG00000103266 CDS Human protein_coding chr16:731827 chr16:731823 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_103036 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:731738-731882
64251 chr19 1207008 1207008 1 + C G rs79175212 1207007 + 1206987 1207027 41 CATCCACCGCATCGACTCCACCGAGGTCATCTACCAGCCGC CATCCACCGCATCGACTCCACGGAGGTCATCTACCAGCCGC < 41bp 0.513228374505518 0.800322371582512 0.04217449 0.2446917 prediction 0.574187994153989 Functional Gain - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207007 chr19:1207008 synonymous SNV . 0 22 hm5C_associated_SNPs_103042 3 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:1206956-1207009
64251 chr3 9506176 9506176 1 + T G rs147128913 9506174 + 9506154 9506194 41 AGCAGAATGTCACCAAGTTACTTCGGCCTCTGTCTCCAGTC AGCAGAATGTCACCAAGTTACTGCGGCCTCTGTCTCCAGTC < 41bp 0.460816997110444 0.7870354592793 0.2569738 0.35620868 prediction 0.574070918558599 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9506174 chr3:9506176 synonymous SNV . 0 23 hm5C_associated_SNPs_103050 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9506138-9506206
64251 chr7 128845065 128845065 1 + T A LUAD 128845061 + 128845041 128845081 41 CAGAATGAGGTGCAGAACATCAAGTTCAACAGTTCAGGCCA CAGAATGAGGTGCAGAACATCAAGATCAACAGTTCAGGCCA < 41bp 0.533181539336556 0.820205455484554 0.3442492 0.764843 prediction 0.574047832295997 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128845061 chr7:128845065 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103053 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:128845060-128845080
64251 chr1 161138933 161138933 1 + C G rs12735723 161138932 + 161138912 161138952 41 TCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGCCTC TCAGTGTTCTCAGAGGCCAGCGGGTCTGTGGGCTCAGCCTC < 41bp 0.479627377669623 0.787017247902098 0.80561393 0.9175999 prediction 0.574034495804196 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161138932 chr1:161138933 nonsynonymous SNV 0.767 3 22 hm5C_associated_SNPs_103054 1 0 3 DDX24 POSTAR2 ENCODE chr1:161138898-161138977
64251 chr3 10188246 10188246 1 + T A KIRC 10188242 + 10188222 10188262 41 CAGGGACACACGATGGGCTTCTGGTTAACCAAACTGAATTA CAGGGACACACGATGGGCTTCTGGATAACCAAACTGAATTA < 41bp 0.550227592102503 0.83723310282437 0.20079407 0.42158568 prediction 0.574011021443734 Functional Gain - VHL ENSG00000134086 CDS Human protein_coding chr3:10188242 chr3:10188246 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103055 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:10188194-10188251
64251 chrX 48652484 48652484 1 + C G ESCA 48652483 + 48652463 48652503 41 CCTCATGCCTTTCCCTGGACCCCTACTGGGCTCACCCACGG CCTCATGCCTTTCCCTGGACCGCTACTGGGCTCACCCACGG < 41bp 0.527152642507762 0.814144673588881 0.015178204 0.047178864 prediction 0.573984062162238 Functional Gain - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652483 chrX:48652484 synonymous SNV . 0 22 hm5C_associated_SNPs_103058 0 0 3 DDX55 POSTAR2 ENCODE chrX:48652473-48652513
64251 chr19 45567668 45567668 1 + C A rs71352251 45567664 + 45567644 45567684 41 ACCTCCAGCTCCCGCTCCAGCTCTCGCTCCAGCTCCCGCTC ACCTCCAGCTCCCGCTCCAGCTCTAGCTCCAGCTCCCGCTC < 41bp 0.368884587172583 0.786990767425357 0.3585677 0.84228384 prediction 0.573981534850714 Functional Gain - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567664 chr19:45567668 nonsynonymous SNV 0.761 0 25 hm5C_associated_SNPs_103059 0 0 1 RBFOX2 POSTAR2 ENCODE chr19:45567627-45567680
64251 chr11 64081828 64081828 1 + C G rs541359948 64081827 + 64081807 64081847 41 CCCTGGCAGTCGCTGGAGGCCCCCGGAAGACAGGTGAGAGC CCCTGGCAGTCGCTGGAGGCCGCCGGAAGACAGGTGAGAGC < 41bp 0.483120888722143 0.786966704592607 0.58062994 0.827983 prediction 0.573933409185213 Functional Gain - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64081827 chr11:64081828 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_103062 0 0 3 BUD13 POSTAR2 ENCODE chr11:64081733-64081855
64251 chr1 248059235 248059235 1 + C A LUSC 248059231 + 248059211 248059251 41 GTGGTGTGGAGTGCCTGCTTCTGGCTGTCATGGCCTATGAC GTGGTGTGGAGTGCCTGCTTCTGGATGTCATGGCCTATGAC < 41bp 0.612565794863154 0.899520930943689 0.86549914 0.8682022 prediction 0.57391027216107 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059231 chr1:248059235 nonsynonymous SNV 0.922 3 25 hm5C_associated_SNPs_103063 0 0 2 NONO POSTAR2 ENCODE chr1:248059214-248059271
64251 chr2 39009025 39009025 1 + T A rs149539286 39009021 + 39009001 39009041 41 TCTTATTGAAGGACATCTTACAGCTTCCCAATGAGAGGCCA TCTTATTGAAGGACATCTTACAGCATCCCAATGAGAGGCCA < 41bp 0.518764014429346 0.805712968651358 0.18168834 0.19321147 prediction 0.573897908444025 Functional Gain - GEMIN6 ENSG00000152147 CDS Human protein_coding chr2:39009021 chr2:39009025 synonymous SNV . 0 25 hm5C_associated_SNPs_103064 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:39008981-39009043
64251 chr10 65357838 65357838 1 + C A LIHC 65357834 + 65357814 65357854 41 TTTTGTCATATGGCTGCTTTCTCCCTATACCAAAGGAGCAA TTTTGTCATATGGCTGCTTTCTCCATATACCAAAGGAGCAA < 41bp 0.622300656244097 0.909240406868126 0.07986012 0.96094334 prediction 0.573879501248059 Functional Gain - REEP3 ENSG00000165476 CDS Human protein_coding chr10:65357834 chr10:65357838 synonymous SNV . 0 25 hm5C_associated_SNPs_103068 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chr10:65357819-65357848
64251 chr19 19645867 19645867 1 + C A THCA 19645863 + 19645843 19645883 41 GCGTTCCCGTTGCCCGCTCTCTCCCGGAAGCAGAGGACGGT GCGTTCCCGTTGCCCGCTCTCTCCAGGAAGCAGAGGACGGT < 41bp 0.56725643649882 0.854173367611004 0.1251888 0.9186684 prediction 0.573833862224367 Functional Gain - YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19645863 chr19:19645867 synonymous SNV . 0 25 hm5C_associated_SNPs_103070 0 0 3 PPIG POSTAR2 ENCODE chr19:19645842-19645887
64251 chr11 66291352 66291352 1 + C G BLCA 66291351 + 66291331 66291371 41 TGCTCAATGTCATCCACACCCCGGTGAGCCCCATCTCCGGC TGCTCAATGTCATCCACACCCGGGTGAGCCCCATCTCCGGC < 41bp 0.529157146090476 0.816067345530136 0.25540692 0.91805184 prediction 0.573820398879319 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66291351 chr11:66291352 nonsynonymous SNV 0.841 1 22 hm5C_associated_SNPs_103071 0 0 2 PPIG POSTAR2 ENCODE chr11:66291314-66291353
64251 chr19 39961032 39961032 1 + C A THCA 39961028 + 39961008 39961048 41 CCCTGGCAGCTGAAGGTGCTCCCCCGGGACCTGCAGCTCTG CCCTGGCAGCTGAAGGTGCTCCCCAGGGACCTGCAGCTCTG < 41bp 0.370070487120961 0.786886055512424 0.04687354 0.2832458 prediction 0.573772111024847 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39961028 chr19:39961032 synonymous SNV . 0 25 hm5C_associated_SNPs_103073 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39961019-39961053
64251 chr10 124742959 124742959 1 + C G rs377253809 124742958 + 124742938 124742978 41 AACACAACAGCCTCACAATTCCGAGTCCAGCATGTGCTTCG AACACAACAGCCTCACAATTCGGAGTCCAGCATGTGCTTCG < 41bp 0.486845696975441 0.786767175961088 0.40851188 0.8747715 prediction 0.573534351922176 Functional Gain - PSTK ENSG00000179988 CDS Human protein_coding chr10:124742958 chr10:124742959 nonsynonymous SNV 0.049 0 22 hm5C_associated_SNPs_103078 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr10:124742948-124742971
64251 chr18 29598847 29598847 1 + C G rs34097443 29598846 + 29598826 29598866 41 GATGGGCTCCGTGCTGAGCACCGACAGCGGCAAATCGGCGC GATGGGCTCCGTGCTGAGCACGGACAGCGGCAAATCGGCGC < 41bp 0.518268014561265 0.805032057037229 0.16926405 0.20322365 prediction 0.573528084951929 Functional Gain - RNF125 ENSG00000101695 CDS Human protein_coding chr18:29598846 chr18:29598847 synonymous SNV . 0 22 hm5C_associated_SNPs_103080 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:29598829-29598854
64251 chr21 30699657 30699657 1 + T G rs140585235 30699654 + 30699634 30699674 41 GTCATTAGCTTGGGAGACGACTCTGAGACGGACACCGAAGG GTCATTAGCTTGGGAGACGACTCGGAGACGGACACCGAAGG < 41bp 0.426189127384534 0.786754629979134 0.26138276 0.26150912 prediction 0.573509259958268 Functional Gain - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30699654 chr21:30699657 synonymous SNV . 0 24 hm5C_associated_SNPs_103081 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr21:30699592-30699694
64251 chr19 4969134 4969134 1 + C A rs542159835 4969130 + 4969110 4969150 41 GCGAGCGCTTGCGGAGGGCTCGGTCGCCAGCAACCGAGCGG GCGAGCGCTTGCGGAGGGCTCGGTAGCCAGCAACCGAGCGG < 41bp 0.56688315308662 0.85355600683962 0.5113368 0.79102194 prediction 0.573345707505999 Functional Gain - KDM4B ENSG00000127663 UTR5 Human protein_coding chr19:4969130 chr19:4969134 . . 0 25 hm5C_associated_SNPs_103091 0 0 2 AGGF1 POSTAR2 ENCODE chr19:4969131-4969239
64251 chr1 40954798 40954798 1 + C G LUSC 40954797 + 40954777 40954817 41 GGACATATCTATTGACTTCACCCAGGAAGAGTGGGGGCAGC GGACATATCTATTGACTTCACGCAGGAAGAGTGGGGGCAGC < 41bp 0.507264092932252 0.793897279451222 0.027521014 0.077379584 prediction 0.573266373037939 Functional Gain - ZFP69 ENSG00000187815 CDS Human protein_coding chr1:40954797 chr1:40954798 synonymous SNV . 0 22 hm5C_associated_SNPs_103093 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:40954798-40954799
64251 chr14 76642983 76642983 1 + T G HNSC 76642980 + 76642960 76643000 41 TTTTAGGAGACCAGCATAAACACTTTGGGGACTGAGAGGAT TTTTAGGAGACCAGCATAAACACGTTGGGGACTGAGAGGAT < 41bp 0.514834810537762 0.801467152030269 0.14639103 0.26433823 prediction 0.573264682985014 Functional Gain - GPATCH2L ENSG00000089916 CDS Human protein_coding chr14:76642980 chr14:76642983 synonymous SNV . 0 24 hm5C_associated_SNPs_103094 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:76642968-76643001
64251 chr15 81295513 81295513 1 + C A ACC 81295509 + 81295489 81295529 41 ATGAGCGTGGTGTCGGCCTGCGTGCTCCTGACCCAGTGCCT ATGAGCGTGGTGTCGGCCTGCGTGATCCTGACCCAGTGCCT < 41bp 0.42418987275522 0.786628950907258 0.41258043 0.6139424 prediction 0.573257901814517 Functional Gain - TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81295509 chr15:81295513 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_103095 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:81295493-81295521
64251 chr12 31242219 31242219 1 + C A rs146376682 31242215 + 31242195 31242235 41 TGTGAGGAGCAGCCCCCTCCCTGACCTGGCCGGCCCAGCAC TGTGAGGAGCAGCCCCCTCCCTGAACTGGCCGGCCCAGCAC < 41bp 0.422661678351243 0.786616123427616 0.05134344 0.19824785 prediction 0.573232246855232 Functional Gain - DDX11 ENSG00000013573 intronic Human protein_coding chr12:31242215 chr12:31242219 . . 0 25 hm5C_associated_SNPs_103097 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:31242197-31242225
64251 chr12 57922962 57922962 1 + C G rs200717548 57922961 + 57922941 57922981 41 AGGCAGCTGTCCCTCTGCCTCCCCGGGCCCGCCCTGGCCGT AGGCAGCTGTCCCTCTGCCTCGCCGGGCCCGCCCTGGCCGT < 41bp 0.484067186448054 0.786598602447457 0.17200667 0.19895726 prediction 0.573197204894915 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57922961 chr12:57922962 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_103100 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:57922946-57922980
64251 chr19 50906794 50906794 1 + C G HNSC 50906793 + 50906773 50906813 41 CATGGACCCCGACGTGATCACCGGTTACAACATCCAGAACT CATGGACCCCGACGTGATCACGGGTTACAACATCCAGAACT < 41bp 0.474636465269769 0.786522738695852 0.13650084 0.67324615 prediction 0.573045477391704 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906793 chr19:50906794 synonymous SNV . 0 22 hm5C_associated_SNPs_103108 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:50906788-50906808
64251 chr1 162769725 162769725 1 + C A COAD 162769721 + 162769701 162769741 41 GCTTTGAACAGGAACTTCAACCAGCAGGTAAGGCCTGTCTC GCTTTGAACAGGAACTTCAACCAGAAGGTAAGGCCTGTCTC < 41bp 0.392482070677146 0.78648315921903 0.2611969 0.30638403 prediction 0.572966318438059 Functional Gain - HSD17B7 ENSG00000132196 CDS Human protein_coding chr1:162769721 chr1:162769725 nonsynonymous SNV 0.329 0 25 hm5C_associated_SNPs_103111 0 0 6 BUD13 POSTAR2 ENCODE chr1:162769683-162769741
64251 chr17 41477150 41477150 1 + C G OV 41477149 + 41477129 41477169 41 CCACTGCCTCCTCCTTCTTGCCCCACTTCCAAGCCCTGCAT CCACTGCCTCCTCCTTCTTGCGCCACTTCCAAGCCCTGCAT < 41bp 0.526630313068372 0.813103833516665 0.029380232 0.21855345 prediction 0.572947040896585 Functional Gain - ARL4D ENSG00000175906 CDS Human protein_coding chr17:41477149 chr17:41477150 nonsynonymous SNV 0.975 3 22 hm5C_associated_SNPs_103112 0 0 3 CPSF2 POSTAR2 GSE37401,GSM917670 chr17:41477134-41477161
64251 chr16 66919297 66919297 1 + C G LUAD 66919296 + 66919276 66919316 41 TCTGGAGAGGGGCTTCAATACCGAGGCCCTCAACATTTACC TCTGGAGAGGGGCTTCAATACGGAGGCCCTCAACATTTACC < 41bp 0.50659254601423 0.793053708386717 0.42606854 0.39187533 prediction 0.572922324744973 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66919296 chr16:66919297 synonymous SNV . 0 22 hm5C_associated_SNPs_103115 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:66919272-66919366
64251 chrX 47044935 47044935 1 + C A COAD 47044931 + 47044911 47044951 41 GCCCTGAGCGGGAGGAGAAGCTCACCGACTGGCAGAAGCTG GCCCTGAGCGGGAGGAGAAGCTCAACGACTGGCAGAAGCTG < 41bp 0.36848795775175 0.786458408191793 0.21608952 0.6258395 prediction 0.572916816383585 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47044931 chrX:47044935 nonsynonymous SNV 0.940 4 25 hm5C_associated_SNPs_103117 0 0 2 GPKOW POSTAR2 ENCODE chrX:47044899-47044941
64251 chr2 168725997 168725997 1 + C A HNSC 168725993 + 168725973 168726013 41 GTGGAGGACTTTATTGACTCCTACCATAACCTTACCCTCAA GTGGAGGACTTTATTGACTCCTACAATAACCTTACCCTCAA < 41bp 0.376163373004569 0.786458257840405 0.02246517 0.91109276 prediction 0.572916515680809 Functional Gain - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725993 chr2:168725997 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_103118 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:168725950-168726028
64251 chrX 129059013 129059013 1 + C A LUAD 129059009 + 129058989 129059029 41 TTTCAAAATAAGGAGCTTCCCAGACCTGTGTTAGAAGGGCA TTTCAAAATAAGGAGCTTCCCAGAACTGTGTTAGAAGGGCA < 41bp 0.38888343741659 0.786441490967601 0.25042206 0.1776922 prediction 0.572882981935202 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129059009 chrX:129059013 nonsynonymous SNV 0.254 0 25 hm5C_associated_SNPs_103122 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:129058994-129059032
64251 chr6 26021048 26021048 1 + T A LUAD 26021044 + 26021024 26021064 41 GGGCTATTTGAGGACACTAACCTGTGCGCCATCCACGCCAA GGGCTATTTGAGGACACTAACCTGAGCGCCATCCACGCCAA < 41bp 0.510800252403908 0.797240583932069 0.19190666 0.46875387 prediction 0.572880663056322 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26021044 chr6:26021048 nonsynonymous SNV 0.982 1 25 hm5C_associated_SNPs_103123 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26020940-26021060
64251 chr1 155108444 155108444 1 + C G HNSC 155108443 + 155108423 155108463 41 CGGAGCATGCGTGGTCTTCACCCTTGGCATGTTCTCCGCCG CGGAGCATGCGTGGTCTTCACGCTTGGCATGTTCTCCGCCG < 41bp 0.506151904438206 0.792582837471231 0.110729754 0.18220916 prediction 0.572861866066049 Functional Gain - SLC50A1 ENSG00000169241 CDS Human protein_coding chr1:155108443 chr1:155108444 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_103124 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155108414-155108466
64251 chr2 112656268 112656268 1 + T G CHOL 112656266 + 112656246 112656286 41 CAGGACAGGTTCGGGACGTCCATCTGTCCATCCGTCCGGAG CAGGACAGGTTCGGGACGTCCAGCTGTCCATCCGTCCGGAG < 41bp 0.494510200099355 0.786386727479868 0.04549533 0.18225557 prediction 0.572773454959735 Functional Gain - MERTK ENSG00000153208 UTR5 Human protein_coding chr2:112656266 chr2:112656268 . . 0 23 hm5C_associated_SNPs_103130 0 0 3 DDX3X POSTAR2 ENCODE chr2:112656200-112656282
64251 chrX 136004487 136004487 1 + C G rs143009312 136004486 + 136004466 136004506 41 AAGGGAATAAAAGCAGGCTGCCGGACCCAGCAGTGGCAAGG AAGGGAATAAAAGCAGGCTGCGGGACCCAGCAGTGGCAAGG < 41bp 0.501356693517578 0.787680719632013 0.8061024 0.87993646 prediction 0.572648052228869 Functional Gain - RBMX;GPR101 ENSG00000234062 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:136004486 chrX:136004487 . . 0 22 hm5C_associated_SNPs_103133 0 0 1 LSM11 POSTAR2 ENCODE chrX:136004449-136004527
64251 chr12 57883288 57883288 1 + C G SARC 57883287 + 57883267 57883307 41 CTTGGTTCAGTGCGGAGAGCCCTGACTCACATTGACCACAG CTTGGTTCAGTGCGGAGAGCCGTGACTCACATTGACCACAG < 41bp 0.491340302431952 0.78626371425217 0.11784732 0.30003646 prediction 0.57252742850434 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57883287 chr12:57883288 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_103138 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:57883227-57883450
64251 chr17 18769234 18769234 1 + T G OV 18769232 + 18769212 18769252 41 GTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAA GTTTTCAGCAAACTCGAATTCAGCATGTATGGAGCTATCAA < 41bp 0.482804497444649 0.786263181449179 0.103390634 0.33249027 prediction 0.572526362898359 Functional Gain - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18769232 chr17:18769234 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_103139 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr17:18769219-18769247
64251 chr17 40925538 40925538 1 + C A UCEC 40925534 + 40925514 40925554 41 GCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTGAGGCT GCCGTGGCAGTATCGCTTCCCACCATTCTTTACGTGAGGCT < 41bp 0.395013553439526 0.786212743605469 0.0044662654 0.011352241 prediction 0.572425487210937 Functional Gain - VPS25 ENSG00000131475 CDS Human protein_coding chr17:40925534 chr17:40925538 synonymous SNV . 0 25 hm5C_associated_SNPs_103146 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:40925520-40925547
64251 chr10 15146039 15146039 1 + T G STAD 15146037 + 15146017 15146057 41 CATTTGAAGATCTGTCAAAACCTAAGAGAAAGCTTGCTGAC CATTTGAAGATCTGTCAAAACCGAAGAGAAAGCTTGCTGAC < 41bp 0.503861909232374 0.790065617728381 0.05998677 0.27967745 prediction 0.572407416992013 Functional Gain - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15146037 chr10:15146039 synonymous SNV . 0 23 hm5C_associated_SNPs_103148 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:15146000-15146040
64251 chr7 23163426 23163426 1 + C G HNSC 23163425 + 23163405 23163445 41 TGTGACGTGATCCTCATGGTCCAGGAAAGAAAGATACCTGC TGTGACGTGATCCTCATGGTCGAGGAAAGAAAGATACCTGC < 41bp 0.502208454427606 0.788278086828404 0.17920545 0.8936746 prediction 0.572139264801596 Functional Gain - KLHL7 ENSG00000122550 CDS Human protein_coding chr7:23163425 chr7:23163426 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_103151 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr7:23163395-23163433
64251 chr14 23304015 23304015 1 + C A rs143683198 23304011 + 23303991 23304031 41 AGGTTGCAGTGAGCCAAGGTCACACCATTGCACTCCAACCT AGGTTGCAGTGAGCCAAGGTCACAACATTGCACTCCAACCT < 41bp 0.428251092190554 0.786052576148941 0.45030698 0.56361663 prediction 0.572105152297882 Functional Gain - MRPL52 ENSG00000172590 UTR3 Human protein_coding chr14:23304011 chr14:23304015 . . 0 25 hm5C_associated_SNPs_103152 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221660 chr14:23304000-23304020
64251 chr12 48359119 48359119 1 + C A UCEC 48359115 + 48359095 48359135 41 CACACAGTGATCAGAGATTGCGCCCTCAGCGAACGTGAGTT CACACAGTGATCAGAGATTGCGCCATCAGCGAACGTGAGTT < 41bp 0.36487381312323 0.786031006450645 0.2453317 0.36934215 prediction 0.57206201290129 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48359115 chr12:48359119 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_103156 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:48359096-48359125
64251 chr7 26191946 26191946 1 + T G rs578183074 26191943 + 26191923 26191963 41 GCCGGCTGCCGAGGGAACGCCTTTGTGCCCGGTGCTGGGAA GCCGGCTGCCGAGGGAACGCCTTGGTGCCCGGTGCTGGGAA < 41bp 0.563053664098102 0.848928137907278 0.107305974 0.240192 prediction 0.571748947618353 Functional Gain - NFE2L3 ENSG00000050344 UTR5 Human protein_coding chr7:26191943 chr7:26191946 . . 0 24 hm5C_associated_SNPs_103171 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:26191940-26191960
64251 chr11 709566 709566 1 + C G BLCA 709565 + 709545 709585 41 CCCTGCAGTGGCAGCCTGGGCCGGTCCGACGGTGTGGCCAA CCCTGCAGTGGCAGCCTGGGCGGGTCCGACGGTGTGGCCAA < 41bp 0.49697599802364 0.785789809910624 0.12475374 0.7270545 prediction 0.571579619821248 Functional Gain - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:709565 chr11:709566 nonsynonymous SNV 0.987 2 22 hm5C_associated_SNPs_103176 0 0 2 PPIG POSTAR2 ENCODE chr11:709555-709573
64251 chr9 35842531 35842531 1 + C G rs143767690 35842530 + 35842510 35842550 41 GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGC GCCTGGGACCACGTCCCCACCGGAGCACTGCTGGCCAGTGC < 41bp 0.544275171178558 0.830023506058749 0.4330189 0.9129696 prediction 0.571496669760383 Functional Gain - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35842530 chr9:35842531 synonymous SNV . 0 22 hm5C_associated_SNPs_103180 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35842516-35842555
64251 chr20 21283980 21283980 1 + C A rs559843409 21283976 + 21283956 21283996 41 GCTGGTGCCCTCTGCCGCTGCTCCCGTCTCTTTGGTTACGC GCTGGTGCCCTCTGCCGCTGCTCCAGTCTCTTTGGTTACGC < 41bp 0.433863754583111 0.78573501708722 0.10254583 0.6321639 prediction 0.571470034174441 Functional Gain - XRN2 ENSG00000088930 UTR5 Human protein_coding chr20:21283976 chr20:21283980 . . 0 25 hm5C_associated_SNPs_103183 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:21283980-21284000
64251 chr14 69925177 69925177 1 + C A UCEC 69925173 + 69925153 69925193 41 ATGTTGCCACAGTACATGTCCTCCCTGAGGTGGGCGGAATA ATGTTGCCACAGTACATGTCCTCCATGAGGTGGGCGGAATA < 41bp 0.376648728461496 0.785730329480046 0.11261785 0.9236097 prediction 0.571460658960092 Functional Gain - SLC39A9 ENSG00000029364 CDS Human protein_coding chr14:69925173 chr14:69925177 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103184 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:69925153-69925179
64251 chr6 21594876 21594876 1 + C A UCEC 21594872 + 21594852 21594892 41 AATCGCCTCCTCCCCCACGCCCGGCTCCACCGCCTCCACGG AATCGCCTCCTCCCCCACGCCCGGATCCACCGCCTCCACGG < 41bp 0.567269904938552 0.852997705776182 0.14221305 0.28960374 prediction 0.571455601675261 Functional Gain - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21594872 chr6:21594876 synonymous SNV . 0 25 hm5C_associated_SNPs_103186 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:21594860-21594880
64251 chrX 56590814 56590814 1 + C G BLCA 56590813 + 56590793 56590833 41 AACTTCTCTGAGCTCCAGAGCCAGATGCAGCAGCAGCTTAT AACTTCTCTGAGCTCCAGAGCGAGATGCAGCAGCAGCTTAT < 41bp 0.524241702194712 0.809953869554243 0.90394205 0.92188334 prediction 0.571424334719062 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590813 chrX:56590814 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_103190 0 0 1 YBX3 POSTAR2 ENCODE chrX:56590765-56590826
64251 chr17 7577569 7577569 1 - A T HNSC 7577573 - 7577553 7577593 41 ACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCAT ACCACCATCCACTACAACTACATGAGTAACAGTTCCTGCAT < 41bp 0.502805844193788 0.78851057995453 0.27352014 0.32132304 prediction 0.571409471521483 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577573 chr17:7577569 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_103191 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7577560-7577580
64251 chr10 77161677 77161677 1 + C G rs376626822 77161676 + 77161656 77161696 41 CGCTGCCAGGACTCTCAGTGCCGGTTTTAATGGGCAGCTCC CGCTGCCAGGACTCTCAGTGCGGGTTTTAATGGGCAGCTCC < 41bp 0.497901699067094 0.785676017016942 0.46686307 0.8402147 prediction 0.571352034033884 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77161676 chr10:77161677 . . 0 22 hm5C_associated_SNPs_103193 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr10:77161667-77161687
64251 chr16 67943314 67943314 1 + C G LAML 67943313 + 67943293 67943333 41 TCACACACCGAGACCTCAAACCTGAGAATCTGCTCTACTAC TCACACACCGAGACCTCAAACGTGAGAATCTGCTCTACTAC < 41bp 0.480935070650258 0.785671328018207 0.435006 0.75933254 prediction 0.571342656036414 Functional Gain - PSKH1 ENSG00000159792 CDS Human protein_coding chr16:67943313 chr16:67943314 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_103194 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:67943290-67943315
64251 chr20 48491289 48491289 1 + C A PCPG 48491285 + 48491265 48491305 41 GGCATCGTGATGTCCCACTACACGCACCATAACCTCTCCCC GGCATCGTGATGTCCCACTACACGAACCATAACCTCTCCCC < 41bp 0.366976407308711 0.785643855658757 0.11361948 0.20882997 prediction 0.571287711317514 Functional Gain - SLC9A8 ENSG00000197818 CDS Human protein_coding chr20:48491285 chr20:48491289 nonsynonymous SNV 0.986 4 25 hm5C_associated_SNPs_103196 0 0 1 NOL12 POSTAR2 ENCODE chr20:48491256-48491315
64251 chr1 161127927 161127927 1 + C G OV 161127926 + 161127906 161127946 41 CATAGGGGTGGCAAAATATGCCTGACGGATCATTTCAAACC CATAGGGGTGGCAAAATATGCGTGACGGATCATTTCAAACC < 41bp 0.524516294663035 0.81015353762365 0.080147505 0.1968256 prediction 0.57127448592123 Functional Gain - UFC1 ENSG00000143222 CDS Human protein_coding chr1:161127926 chr1:161127927 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_103197 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:161127920-161127941
64251 chr1 111434082 111434082 1 + T A UCEC 111434078 + 111434058 111434098 41 AAGTATGTCCTGTTTTTCTTCAACTTGCTCTTTTGGGTAAG AAGTATGTCCTGTTTTTCTTCAACATGCTCTTTTGGGTAAG < 41bp 0.475705108193197 0.785619339473671 0.16312861 0.068525195 prediction 0.571238678947342 Functional Gain - CD53 ENSG00000143119 CDS Human protein_coding chr1:111434078 chr1:111434082 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_103199 0 0 4 DDX3X POSTAR2 ENCODE chr1:111434075-111434094
64251 chr1 202991994 202991994 1 + T G CESC 202991991 + 202991971 202992011 41 TTTCCATTTCAGTTTACTATCAATGTGAGCACGGACATGCG TTTCCATTTCAGTTTACTATCAAGGTGAGCACGGACATGCG < 41bp 0.409556296431346 0.785533611287051 0.18052411 0.92251873 prediction 0.571067222574103 Functional Gain - TMEM183A;TMEM183B ENSG00000163444 CDS Human protein_coding chr1:202991991 chr1:202991994 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_103205 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:202991982-202991998
64251 chr1 19952903 19952903 1 + T A rs72959490 19952899 + 19952879 19952919 41 AGGAGCAGGAGCAGTGACTTCACCTGAGAACATCCCAGCGG AGGAGCAGGAGCAGTGACTTCACCAGAGAACATCCCAGCGG < 41bp 0.529243706293035 0.814692041807868 0.307244 0.446818 prediction 0.570896671029665 Functional Gain - MINOS1 ENSG00000270136;ENSG00000173436;ENSG00000270136 UTR5;UTR3 Human other chr1:19952899 chr1:19952903 . . 0 25 hm5C_associated_SNPs_103209 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:19952880-19952920
64251 chr2 220371465 220371465 1 + T G UCEC 220371462 + 220371442 220371482 41 CGAGGTGCTCATCCTGAACTCGATTGTTCTGCCACACAAGG CGAGGTGCTCATCCTGAACTCGAGTGTTCTGCCACACAAGG < 41bp 0.404903259596313 0.785324610095662 0.3888055 0.81647706 prediction 0.570649220191324 Functional Gain - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220371462 chr2:220371465 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_103215 0 0 4 DDX55 POSTAR2 ENCODE chr2:220371464-220371593
64251 chr2 120005377 120005377 1 + C G rs140126918 120005376 + 120005356 120005396 41 CTGGGAGGTGGAGGCCATGCCCCTGCGCCTCCTCCCGGCCT CTGGGAGGTGGAGGCCATGCCGCTGCGCCTCCTCCCGGCCT < 41bp 0.530058159508498 0.815277076236329 0.28069347 0.40656233 prediction 0.570437833455662 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005376 chr2:120005377 synonymous SNV . 0 22 hm5C_associated_SNPs_103223 0 0 1 RPS3 POSTAR2 ENCODE chr2:120005288-120005396
64251 chr9 130566803 130566803 1 + T G UCEC 130566801 + 130566781 130566821 41 GAGGACTTGGACCGGCTGAACATCATCCACGTCACTGGGAC GAGGACTTGGACCGGCTGAACAGCATCCACGTCACTGGGAC < 41bp 0.566878713048348 0.851948920781248 0.24250373 0.3243956 prediction 0.5701404154658 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130566801 chr9:130566803 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_103232 0 0 7 DDX24 POSTAR2 ENCODE chr9:130566774-130566827
64251 chr6 28317705 28317705 1 + C G rs564722467 28317704 + 28317684 28317724 41 GCCCGGAAGTGGCTTCTGTGCCCCGCCCTGCGGGTGGTTTG GCCCGGAAGTGGCTTCTGTGCGCCGCCCTGCGGGTGGTTTG < 41bp 0.493658147428742 0.78498592999561 0.055154026 0.11805725 prediction 0.569971859991221 Functional Gain - ZKSCAN3 ENSG00000189298 UTR5 Human protein_coding chr6:28317704 chr6:28317705 . . 0 22 hm5C_associated_SNPs_103243 0 0 1 DDX3X POSTAR2 ENCODE chr6:28317700-28317769
64251 chr6 26156711 26156711 1 + C G rs141466409 26156710 + 26156690 26156730 41 CCGCAAGTCTGCAGGTGCGGCCAAGCGCAAAGCGTCTGGGC CCGCAAGTCTGCAGGTGCGGCGAAGCGCAAAGCGTCTGGGC < 41bp 0.492355858298895 0.784957727274557 0.4873313 0.37504926 prediction 0.569915454549114 Functional Gain - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156710 chr6:26156711 synonymous SNV . 0 22 hm5C_associated_SNPs_103245 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156540-26156740
64251 chr19 14830041 14830041 1 + T G UCEC 14830038 + 14830018 14830058 41 TTCAGGCACAGCTCCTCACTCACTGTACACAAAAGAACCCA TTCAGGCACAGCTCCTCACTCACGGTACACAAAAGAACCCA < 41bp 0.403155112343379 0.784955406721762 0.044285536 0.359613 prediction 0.569910813443525 Functional Gain - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14830038 chr19:14830041 synonymous SNV . 0 24 hm5C_associated_SNPs_103246 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:14830015-14830041
64251 chr7 141490297 141490297 1 + C G BRCA 141490296 + 141490276 141490316 41 TTCAACTGGTCCTCATATAACCTCATTATCCTGGGCCTGGC TTCAACTGGTCCTCATATAACGTCATTATCCTGGGCCTGGC < 41bp 0.517310885380727 0.80225294922925 0.07744059 0.1424177 prediction 0.569884127697046 Functional Gain - TAS2R5 ENSG00000127366 CDS Human protein_coding chr7:141490296 chr7:141490297 nonsynonymous SNV 0.712 3 22 hm5C_associated_SNPs_103247 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141490284-141490308
64251 chr17 72758264 72758264 1 + C A rs200926419 72758260 + 72758240 72758280 41 GTTCATCCGGTCAGTGGACCCAGACTCCCCGGCTGAGGCTT GTTCATCCGGTCAGTGGACCCAGAATCCCCGGCTGAGGCTT < 41bp 0.618620098210479 0.903537481592677 0.34268516 0.36098695 prediction 0.569834766764397 Functional Gain - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72758260 chr17:72758264 nonsynonymous SNV 0.890 1 25 hm5C_associated_SNPs_103249 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:72758262-72758298
64251 chr4 17616277 17616277 1 + C A LUAD 17616273 + 17616253 17616293 41 GGATCTCTCTTGCGCCATTCCAAACATGGCGGCTCCACTAG GGATCTCTCTTGCGCCATTCCAAAAATGGCGGCTCCACTAG < 41bp 0.59809915519104 0.882987687495966 0.29249346 0.3436116 prediction 0.569777064609852 Functional Gain - MED28 ENSG00000118579 UTR5 Human protein_coding chr4:17616273 chr4:17616277 . . 0 25 hm5C_associated_SNPs_103252 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:17616260-17616280
64251 chr17 61889361 61889361 1 + C G LUSC 61889360 + 61889340 61889380 41 AGTAAATGGAACTGGCTTACCCGGCGTCTGGTAGAATTTAC AGTAAATGGAACTGGCTTACCGGGCGTCTGGTAGAATTTAC < 41bp 0.514589971924876 0.799444873210448 0.7862781 0.90261555 prediction 0.569709802571144 Functional Gain - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61889360 chr17:61889361 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_103255 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:61889308-61889383
64251 chr22 40804844 40804844 1 + C A LUAD 40804840 + 40804820 40804860 41 CTGACCCCGGAGGAGCTGCTCTACCGGGTAAGGGGGCCTCC CTGACCCCGGAGGAGCTGCTCTACAGGGTAAGGGGGCCTCC < 41bp 0.367700027341807 0.784843565660901 0.14284739 0.6450587 prediction 0.569687131321801 Functional Gain - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40804840 chr22:40804844 synonymous SNV . 0 25 hm5C_associated_SNPs_103256 0 0 3 BUD13 POSTAR2 ENCODE chr22:40804805-40804845
64251 chr16 19613003 19613003 1 + C G OV 19612999 + 19612979 19613019 41 CTCCCAGGAAAGCTCGTGTACGAGCGCATCTTTTCCATGTG CTCCCAGGAAAGCTCGTGTACGAGGGCATCTTTTCCATGTG < 41bp 0.496884628364456 0.784838599662787 0.33382028 0.9095123 prediction 0.569677199325573 Functional Gain - C16orf62 ENSG00000103544 CDS Human protein_coding chr16:19612999 chr16:19613003 nonsynonymous SNV 0.948 4 25 hm5C_associated_SNPs_103258 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:19612998-19613018
64251 chr5 76028982 76028982 1 + C A LUSC 76028978 + 76028958 76028998 41 CCAACCGCAGCAAGAAGTCCCGGGCTTTGTTCCTGTCAGCT CCAACCGCAGCAAGAAGTCCCGGGATTTGTTCCTGTCAGCT < 41bp 0.415692435861615 0.784780756359889 0.8936657 0.9173058 prediction 0.569561512719777 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76028978 chr5:76028982 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103262 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:76028968-76028997
64251 chr10 70748846 70748846 1 + C G UCS 70748845 + 70748825 70748865 41 GGTGGTGGAGCCCGAGGGGCCCGTCGCCCAGCGAGCGGTGA GGTGGTGGAGCCCGAGGGGCCGGTCGCCCAGCGAGCGGTGA < 41bp 0.50126546568787 0.786021252265305 0.3633077 0.6495872 prediction 0.56951157315487 Functional Gain - KIF1BP ENSG00000198954 CDS Human protein_coding chr10:70748845 chr10:70748846 synonymous SNV . 0 22 hm5C_associated_SNPs_103264 0 0 1 RPS3 POSTAR2 ENCODE chr10:70748741-70748846
64251 chr11 110327727 110327727 1 + T A rs186702065 110327723 + 110327703 110327743 41 TGAGAAGTTAGATGCAATCACTGATGAGGAGAATGACATGC TGAGAAGTTAGATGCAATCACTGAAGAGGAGAATGACATGC < 41bp 0.555453013382219 0.840194462015535 0.1389867 0.13353622 prediction 0.569482897266631 Functional Gain - FDX1 ENSG00000137714 CDS Human protein_coding chr11:110327723 chr11:110327727 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_103265 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:110327704-110327762
64251 chr6 135524449 135524449 1 + C A rs114298899 135524445 + 135524425 135524465 41 CAGTACCTAAAAACAGGTCCCTGGCGAGCCCCTTGCAGGTA CAGTACCTAAAAACAGGTCCCTGGAGAGCCCCTTGCAGGTA < 41bp 0.443402695841218 0.784732016719753 0.07641989 0.13062724 prediction 0.569464033439505 Functional Gain - MYB ENSG00000118513 CDS Human protein_coding chr6:135524445 chr6:135524449 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_103266 0 0 3 IGF2BP1 POSTAR2 ENCODE chr6:135524361-135524463
64251 chr19 1250353 1250353 1 + T G rs202070687 1250351 + 1250331 1250371 41 GCGCGGGGCCCCCGGCGGCGCCTGCGAGCTGGGCCCGGCGG GCGCGGGGCCCCCGGCGGCGCCGGCGAGCTGGGCCCGGCGG < 41bp 0.566047067990723 0.85076458203896 0.49492514 0.86955523 prediction 0.569435028096474 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1250351 chr19:1250353 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_103268 0 0 2 RPS3 POSTAR2 ENCODE chr19:1250326-1250391
64251 chr10 75523334 75523334 1 + T G UCEC 75523331 + 75523311 75523351 41 GGCCAGGTGCCACCCTTAGTCACTACCAACTTCCTGGTGAA GGCCAGGTGCCACCCTTAGTCACGACCAACTTCCTGGTGAA < 41bp 0.60906119704428 0.893731020335351 0.13786677 0.5475583 prediction 0.569339646582143 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75523331 chr10:75523334 synonymous SNV . 0 24 hm5C_associated_SNPs_103271 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:75523306-75523353
64251 chr12 56532030 56532030 1 + C A SKCM 56532026 + 56532006 56532046 41 TTGCGCCTGGAGCGTCTCACCCCCCGTCCCACTGCTGCTGA TTGCGCCTGGAGCGTCTCACCCCCAGTCCCACTGCTGCTGA < 41bp 0.365655219001907 0.784608995859861 0.13444883 0.21806875 prediction 0.569217991719722 Functional Gain - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532026 chr12:56532030 nonsynonymous SNV 0.095 0 25 hm5C_associated_SNPs_103280 0 0 7 FXR2 POSTAR2 ENCODE chr12:56531969-56532031
64251 chr12 53450811 53450811 1 + T G COAD 53450808 + 53450788 53450828 41 TATCCCCAGGGCGGACCAGGCACTGGCCACTCTTACCATGC TATCCCCAGGGCGGACCAGGCACGGGCCACTCTTACCATGC < 41bp 0.397956591914222 0.784592940559204 0.42519474 0.75561357 prediction 0.569185881118407 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53450808 chr12:53450811 nonsynonymous SNV 0.990 5 24 hm5C_associated_SNPs_103282 0 0 5 PPIG POSTAR2 ENCODE chr12:53450792-53450813
64251 chr4 184931728 184931728 1 + C A STAD 184931724 + 184931704 184931744 41 CCTTTTGGAGCCAGGAAAACCACCCGAGAGTTTGCCATCCT CCTTTTGGAGCCAGGAAAACCACCAGAGAGTTTGCCATCCT < 41bp 0.359039891783567 0.784589239125424 0.16001734 0.28062016 prediction 0.569178478250847 Functional Gain - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184931724 chr4:184931728 synonymous SNV . 0 25 hm5C_associated_SNPs_103283 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:184931728-184931729
64251 chr12 125576014 125576014 1 + C G CESC 125576010 + 125575990 125576030 41 AGCACGCTGTCGAGGCGATGCTGGCTGCGGCAAGCATTGGT AGCACGCTGTCGAGGCGATGCTGGGTGCGGCAAGCATTGGT < 41bp 0.508017784110919 0.792562936462474 0.56224304 0.8937398 prediction 0.569090304703111 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125576010 chr12:125576014 nonsynonymous SNV 0.526 2 25 hm5C_associated_SNPs_103285 0 0 3 DDX24 POSTAR2 ENCODE chr12:125576001-125576071
64251 chr8 146278737 146278737 1 + C G LUAD 146278736 + 146278716 146278756 41 GCAGCAAAAGAACGCCCTTGCCCCGGAAGAGGCAGCTGATG GCAGCAAAAGAACGCCCTTGCGCCGGAAGAGGCAGCTGATG < 41bp 0.536618959544957 0.821148574730979 0.15199766 0.49840397 prediction 0.569059230372044 Functional Gain - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278736 chr8:146278737 nonsynonymous SNV 0.417 3 22 hm5C_associated_SNPs_103287 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:146278725-146278751
64251 chr19 58992220 58992220 1 + T G rs3752112 58992217 + 58992197 58992237 41 GTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCTG GTGAACAAGGGGTCCCAAGCCAGGTCCCTGCCCCTGGTCTG < 41bp 0.583597040023653 0.868106465527749 0.14013872 0.8937468 prediction 0.569018851008191 Functional Gain - ZNF446 ENSG00000083838 UTR3 Human protein_coding chr19:58992217 chr19:58992220 . . 0 24 hm5C_associated_SNPs_103289 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58992200-58992220
64251 chr7 156743023 156743023 1 + C A UCEC 156743019 + 156742999 156743039 41 GAGCGTTGCCTCGGTTTGAACAAGCGCAAAAAGAAGGACGG GAGCGTTGCCTCGGTTTGAACAAGAGCAAAAAGAAGGACGG < 41bp 0.608908262506714 0.893405897458227 0.8428553 0.8237265 prediction 0.568995269903026 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156743019 chr7:156743023 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103292 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:156743005-156743023
64251 chr19 44352090 44352090 1 + T A LAML 44352086 + 44352066 44352106 41 AGGCCTTTAGTCGTGGCTATCACCTTTCTCAACATCAGAAA AGGCCTTTAGTCGTGGCTATCACCATTCTCAACATCAGAAA < 41bp 0.466200593418026 0.784451742258897 0.09039676 0.13527346 prediction 0.568903484517794 Functional Gain - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352086 chr19:44352090 nonsynonymous SNV 0.003 2 25 hm5C_associated_SNPs_103296 0 0 6 TAF15 POSTAR2 SRX029345 chr19:44352080-44352100
64251 chr1 25628159 25628159 1 + C G rs188690303 25628158 + 25628138 25628178 41 AGGGTCATCCTTGGCTCACCCCCAAGGGAAGATCAGCAAGG AGGGTCATCCTTGGCTCACCCGCAAGGGAAGATCAGCAAGG < 41bp 0.519221689643942 0.80363465308893 0.06956801 0.1164234 prediction 0.568825926889975 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25628158 chr1:25628159 synonymous SNV . 0 22 hm5C_associated_SNPs_103301 0 0 2 SND1 POSTAR2 ENCODE chr1:25628109-25628176
64251 chr9 139820600 139820600 1 + C G rs146365735 139820599 + 139820579 139820619 41 AAGGGCTGTGGTGGCATTGGCCGAGGGTCTTCGGGTGCTTC AAGGGCTGTGGTGGCATTGGCGGAGGGTCTTCGGGTGCTTC < 41bp 0.496799287740828 0.784403951377213 0.9156377 0.92768 prediction 0.568807902754425 Functional Gain - TRAF2 ENSG00000127191 UTR3 Human protein_coding chr9:139820599 chr9:139820600 . . 0 22 hm5C_associated_SNPs_103302 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139820574-139820624
64251 chr22 42290878 42290878 1 + C A COAD 42290874 + 42290854 42290894 41 TCTGCAAGAACCTGCTGGAGCGAGCTATAGAGTCCTTGGTG TCTGCAAGAACCTGCTGGAGCGAGATATAGAGTCCTTGGTG < 41bp 0.392678615817536 0.784316916855578 0.8282635 0.88250184 prediction 0.568633833711157 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42290874 chr22:42290878 nonsynonymous SNV 0.895 4 25 hm5C_associated_SNPs_103310 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:42290824-42290916
64251 chr3 128532494 128532494 1 + C G rs147244704 128532493 + 128532473 128532513 41 AATCAAACTCCAGCCCTTGCCCGTGATGGCTCCTTGGGGTC AATCAAACTCCAGCCCTTGCCGGTGATGGCTCCTTGGGGTC < 41bp 0.489032564790848 0.784257095621777 0.081238866 0.3781498 prediction 0.568514191243555 Functional Gain - RAB7A ENSG00000075785 UTR3 Human protein_coding chr3:128532493 chr3:128532494 . . 0 22 hm5C_associated_SNPs_103315 0 0 25 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:128532446-128532494
64251 chr18 61654457 61654457 1 + T G PRAD 61654455 + 61654435 61654475 41 GACCACCCTTTTCTTTTCTTCATCAGGCACCACAAAACCAA GACCACCCTTTTCTTTTCTTCAGCAGGCACCACAAAACCAA < 41bp 0.467100597090686 0.784239258944859 0.024525762 0.06278831 prediction 0.568478517889719 Functional Gain - SERPINB8 ENSG00000166401 CDS Human protein_coding chr18:61654455 chr18:61654457 nonsynonymous SNV 0.361 4 23 hm5C_associated_SNPs_103317 0 0 1 ELAVL1 POSTAR2 GSE29780,GSM738185 chr18:61654435-61654460
64251 chr1 223946078 223946078 1 + T G rs550376001 223946075 + 223946055 223946095 41 TCACAGCAAGGCAGTGCAACCGGTAGCACATCGGGCTCTTT TCACAGCAAGGCAGTGCAACCGGGAGCACATCGGGCTCTTT < 41bp 0.576624040601548 0.860822073948826 0.40602303 0.89810747 prediction 0.568396066694558 Functional Gain - CAPN2 ENSG00000162909 intronic Human protein_coding chr1:223946075 chr1:223946078 . . 0 24 hm5C_associated_SNPs_103325 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:223946007-223946091
64251 chr5 176799113 176799113 1 + C G rs187869615 176799112 + 176799092 176799132 41 CCAGGACAGCTGCATGGCACCCGGCGGGCCGAGCATGCCAT CCAGGACAGCTGCATGGCACCGGGCGGGCCGAGCATGCCAT < 41bp 0.525462169581439 0.809658931769458 0.21212947 0.4624106 prediction 0.568393524376038 Functional Gain - RGS14 ENSG00000169220 UTR3 Human protein_coding chr5:176799112 chr5:176799113 . . 0 22 hm5C_associated_SNPs_103326 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:176799075-176799122
64251 chr1 202156432 202156432 1 + C A rs573486133 202156428 + 202156408 202156448 41 TCTCTGTGATGAACTTCGCACAGGCGTGTGCCAAGAGGGCA TCTCTGTGATGAACTTCGCACAGGAGTGTGCCAAGAGGGCA < 41bp 0.435304452938837 0.784174758953537 0.5171149 0.62104535 prediction 0.568349517907074 Functional Gain - PTPRVP ENSG00000243323 ncRNA_exonic Human processed_transcript chr1:202156428 chr1:202156432 . . 0 25 hm5C_associated_SNPs_103331 0 0 1 RBFOX2 POSTAR2 ENCODE chr1:202156400-202156440
64251 chr1 6646057 6646057 1 + T G STAD 6646055 + 6646035 6646075 41 GGAAGGAGAACCTCCTGGAGCATGAAGCCCGGAATTGCATG GGAAGGAGAACCTCCTGGAGCAGGAAGCCCGGAATTGCATG < 41bp 0.466099749874583 0.784132614005693 0.30084938 0.503697 prediction 0.568265228011385 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6646055 chr1:6646057 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_103335 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:6646029-6646067
64251 chr19 14640495 14640495 1 + C A HNSC 14640491 + 14640471 14640511 41 CAGCAGCCGCGGAGCAGTAGCCGCCGTGGGAGGGAGCCATG CAGCAGCCGCGGAGCAGTAGCCGCAGTGGGAGGGAGCCATG < 41bp 0.498525605818427 0.784088493526979 0.4388242 0.4901504 prediction 0.568176987053958 Functional Gain - TECR ENSG00000099797;ENSG00000132002 UTR5 Human other chr19:14640491 chr19:14640495 . . 0 25 hm5C_associated_SNPs_103338 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:14640479-14640506
64251 chr7 87563794 87563794 1 + T G rs201972241 87563791 + 87563771 87563811 41 CGGCAGCACCATGCAGGCGGCAGTGGCTGTGTCCGTGCCCT CGGCAGCACCATGCAGGCGGCAGGGGCTGTGTCCGTGCCCT < 41bp 0.430821107491005 0.784069833463659 0.7969959 0.9121959 prediction 0.568139666927318 Functional Gain - ADAM22 ENSG00000008277 CDS Human protein_coding chr7:87563791 chr7:87563794 nonsynonymous SNV 0.791 0 24 hm5C_associated_SNPs_103339 0 0 1 PPIG POSTAR2 ENCODE chr7:87563673-87563801
64251 chr17 59477583 59477583 1 + T A HNSC 59477579 + 59477559 59477599 41 GCCAGCGCCATGGCTTACCACCCGTTCCACGCGCCACGGCC GCCAGCGCCATGGCTTACCACCCGATCCACGCGCCACGGCC < 41bp 0.488739327390287 0.784021951925173 0.050966352 0.20448619 prediction 0.568043903850346 Functional Gain - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59477579 chr17:59477583 nonsynonymous SNV 0.986 3 25 hm5C_associated_SNPs_103345 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr17:59477580-59477600
64251 chr14 77236320 77236320 1 + T A GBM 77236316 + 77236296 77236336 41 CTGTCCCCAGATCCCCATACCGAGTGTGCCTACGTTCCAGC CTGTCCCCAGATCCCCATACCGAGAGTGCCTACGTTCCAGC < 41bp 0.54458496198538 0.828597843965234 0.7454158 0.93829834 prediction 0.568025763959709 Functional Gain - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77236316 chr14:77236320 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_103346 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:77236288-77236326
64251 chr15 90168095 90168095 1 + T A LUAD 90168091 + 90168071 90168111 41 TCCTTCCTGTGGGCCTGGCTCTCCTCTGATGCCTTCCCGTG TCCTTCCTGTGGGCCTGGCTCTCCACTGATGCCTTCCCGTG < 41bp 0.443201023356405 0.783952004523618 0.12950954 0.9461728 prediction 0.567904009047237 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90168091 chr15:90168095 synonymous SNV . 0 25 hm5C_associated_SNPs_103350 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:90168035-90168097
64251 chr16 89627460 89627460 1 + T G rs2280370 89627458 + 89627438 89627478 41 CGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGGTGAGCC CGTGGTTCAACCAGCCGGCCCGGAAGATCCGCAGGTGAGCC < 41bp 0.454249773284514 0.783941179216596 0.17595801 0.5634047 prediction 0.567882358433192 Functional Gain - RPL13 ENSG00000167526 CDS Human protein_coding chr16:89627458 chr16:89627460 synonymous SNV . 0 23 hm5C_associated_SNPs_103352 0 0 31 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:89627351-89627471
64251 chr12 38710774 38710774 1 + T A OV 38710770 + 38710750 38710790 41 GTGTCCTGCCTCCTCTTCTCCGCCTTCAGCCGGGCGCTGCG GTGTCCTGCCTCCTCTTCTCCGCCATCAGCCGGGCGCTGCG < 41bp 0.540814295148897 0.824754020029265 0.06717476 0.3467124 prediction 0.567879449760736 Functional Gain - ALG10B ENSG00000175548 CDS Human protein_coding chr12:38710770 chr12:38710774 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_103353 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr12:38710763-38710784
64251 chr1 204042338 204042338 1 + C G rs575414167 204042337 + 204042317 204042357 41 CCTGGAACCCGGGCCCAGAACCGGCGAGCCCAGGTCTGAGC CCTGGAACCCGGGCCCAGAACGGGCGAGCCCAGGTCTGAGC < 41bp 0.507682333307595 0.791605741230462 0.8527293 0.8829067 prediction 0.567846815845734 Functional Gain - SOX13 ENSG00000143842 upstream Human protein_coding chr1:204042337 chr1:204042338 . . 0 22 hm5C_associated_SNPs_103355 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr1:204042338-204042339
64251 chr2 155102434 155102434 1 + T G UCEC 155102431 + 155102411 155102451 41 TTAACTGGAAACTGAATTTCCGCTGGTATCCTGTTCCCCAA TTAACTGGAAACTGAATTTCCGCGGGTATCCTGTTCCCCAA < 41bp 0.575539408789243 0.859420845502737 0.12944591 0.8016691 prediction 0.567762873426988 Functional Gain - GALNT13 ENSG00000144278 CDS Human protein_coding chr2:155102431 chr2:155102434 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_103360 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:155102424-155102444
64251 chr7 99051717 99051717 1 + C A rs139528752 99051713 + 99051693 99051733 41 GCAGAGTCAAAACAGCAGCGCGGGCAACCGGGGACCCCGGC GCAGAGTCAAAACAGCAGCGCGGGAAACCGGGGACCCCGGC < 41bp 0.622321664192294 0.906198225181046 0.8971172 0.90886635 prediction 0.567753121977503 Functional Gain - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99051713 chr7:99051717 nonsynonymous SNV 0.980 0 25 hm5C_associated_SNPs_103361 0 0 4 PPIG POSTAR2 ENCODE chr7:99051668-99051751
64251 chr16 20435283 20435283 1 + T A LUSC 20435279 + 20435259 20435299 41 ATCTGACATCTTCTGGAACACGACTGACACTGGCTGGGTGA ATCTGACATCTTCTGGAACACGACAGACACTGGCTGGGTGA < 41bp 0.551520389707111 0.835394653463886 0.06734374 0.1954532 prediction 0.56774852751355 Functional Gain - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20435279 chr16:20435283 synonymous SNV . 0 25 hm5C_associated_SNPs_103362 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20435259-20435385
64251 chr19 57804114 57804114 1 + T G rs138081768 57804111 + 57804091 57804131 41 CCTCATCCCCTTTATTTTCCCTGTGTATACATTCACTGCTG CCTCATCCCCTTTATTTTCCCTGGGTATACATTCACTGCTG < 41bp 0.435573061909982 0.783850242775808 0.10022086 0.36706722 prediction 0.567700485551616 Functional Gain - ZNF460 ENSG00000197714 UTR3 Human protein_coding chr19:57804111 chr19:57804114 . . 0 24 hm5C_associated_SNPs_103366 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:57804077-57804339
64251 chr5 180661180 180661180 1 + T G STAD 180661178 + 180661158 180661198 41 CTCCCTCCCTCCCAAGTGGACCTGACGCTGGACCCTGACAC CTCCCTCCCTCCCAAGTGGACCGGACGCTGGACCCTGACAC < 41bp 0.48730049664681 0.783818420223331 0.28511494 0.4568342 prediction 0.567636840446662 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180661178 chr5:180661180 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_103371 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:180661172-180661208
64251 chrX 19377810 19377810 1 + C G rs111666443 19377809 + 19377789 19377829 41 GTTATACCTTCAGGGGGCTACCAGACAGTGTTCTCAACTTG GTTATACCTTCAGGGGGCTACGAGACAGTGTTCTCAACTTG < 41bp 0.52908525199579 0.812818730280688 0.08917281 0.26490992 prediction 0.567466956569795 Functional Gain - PDHA1 ENSG00000131828 UTR3 Human protein_coding chrX:19377809 chrX:19377810 . . 0 22 hm5C_associated_SNPs_103376 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:19377724-19377823
64251 chr2 138771422 138771422 1 + T A OV 138771418 + 138771398 138771438 41 GATGACCTCTGCCAGTATATCACATCAGATGACCTCACTCA GATGACCTCTGCCAGTATATCACAACAGATGACCTCACTCA < 41bp 0.544034647467411 0.82775912562364 0.29530656 0.27700207 prediction 0.567448956312457 Functional Gain - HNMT ENSG00000150540 CDS Human protein_coding chr2:138771418 chr2:138771422 nonsynonymous SNV 0.144 1 25 hm5C_associated_SNPs_103378 0 0 1 UCHL5 POSTAR2 ENCODE chr2:138771342-138771468
64251 chr9 124064328 124064328 1 + C A HNSC 124064324 + 124064304 124064344 41 ATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCAC ATCTGGCGTGTGGAGAAGTTCGATATGGTGCCCGTGCCCAC < 41bp 0.396604044741419 0.783693705471211 0.19191813 0.13677645 prediction 0.567387410942422 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124064324 chr9:124064328 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_103380 0 0 8 DDX3X POSTAR2 ENCODE chr9:124064316-124064394
64251 chr19 10370370 10370370 1 + C A rs202218040 10370366 + 10370346 10370386 41 ACCGTCGCCTTCCTGGAGGACAAGCTGCTCTGGCAGGACTC ACCGTCGCCTTCCTGGAGGACAAGATGCTCTGGCAGGACTC < 41bp 0.582729633190528 0.866409573510967 0.10284573 0.20279893 prediction 0.567359880640877 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10370366 chr19:10370370 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_103381 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10370327-10370386
64251 chr4 7057415 7057415 1 + C A rs182873023 7057411 + 7057391 7057431 41 CCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCG CCAGATGACCTTCCATTTCACCGGAGGCAGCAGTTTCAGCG < 41bp 0.410694190575214 0.783669745979529 0.4808738 0.8181008 prediction 0.567339491959058 Functional Gain - TADA2B ENSG00000173011 UTR3 Human protein_coding chr4:7057411 chr4:7057415 . . 0 25 hm5C_associated_SNPs_103382 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:7057400-7057440
64251 chr9 37436696 37436696 1 + C G LUAD 37436695 + 37436675 37436715 41 GGCAGTGCCACCCACAGAACCCGCAACACCATGTCCTTGTT GGCAGTGCCACCCACAGAACCGGCAACACCATGTCCTTGTT < 41bp 0.524686044334596 0.808336331450432 0.080971 0.45141408 prediction 0.567300574231671 Functional Gain - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37436695 chr9:37436696 nonsynonymous SNV 0.566 4 22 hm5C_associated_SNPs_103383 0 0 2 METAP2 POSTAR2 ENCODE chr9:37436686-37436768
64251 chr14 100847523 100847523 1 + T A rs2181170 100847519 + 100847499 100847539 41 TTGGCTCAGCTTGGGAGAAGCGATTGGGGATCTTGCCCCAG TTGGCTCAGCTTGGGAGAAGCGATAGGGGATCTTGCCCCAG < 41bp 0.487427310094426 0.783608773288027 0.35039088 0.47074845 prediction 0.567217546576054 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847519 chr14:100847523 nonsynonymous SNV 0.090 0 25 hm5C_associated_SNPs_103387 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:100847508-100847546
64251 chr3 101571988 101571988 1 + T G LIHC 101571985 + 101571965 101572005 41 AGCATGGAAGATGTTCATCTCAATGAACCCAAACAGGAGAG AGCATGGAAGATGTTCATCTCAAGGAACCCAAACAGGAGAG < 41bp 0.401264775306659 0.783570270422853 0.21478474 0.60567087 prediction 0.567140540845705 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101571985 chr3:101571988 nonsynonymous SNV 0.170 1 24 hm5C_associated_SNPs_103392 0 0 2 GRWD1 POSTAR2 ENCODE chr3:101571932-101572011
64251 chrX 65393488 65393488 1 + C G LUSC 65393487 + 65393467 65393507 41 AAGCTGATGACTCTGTTCCCCCGGGGGGCAGCCATATCTAC AAGCTGATGACTCTGTTCCCCGGGGGGGCAGCCATATCTAC < 41bp 0.545736281452823 0.829276477488915 0.8773438 0.91790974 prediction 0.567080392072183 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65393487 chrX:65393488 nonsynonymous SNV 0.773 4 22 hm5C_associated_SNPs_103395 0 0 7 BUD13 POSTAR2 ENCODE chrX:65393424-65393503
64251 chr6 159052925 159052925 1 + C G rs189102191 159052924 + 159052904 159052944 41 AGTCAGATAGTGACTGAGCCCCGGCCAGCCCAGCGAGGCGA AGTCAGATAGTGACTGAGCCCGGGCCAGCCCAGCGAGGCGA < 41bp 0.52925979028692 0.81276150719307 0.290729 0.5867171 prediction 0.567003433812302 Functional Gain - TMEM181 ENSG00000146433 UTR3 Human protein_coding chr6:159052924 chr6:159052925 . . 0 22 hm5C_associated_SNPs_103402 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:159052893-159052945
64251 chr19 579519 579519 1 + C A rs55713331 579515 + 579495 579535 41 TGCAGCCGGCACAGTCTTCACTACCGTAGAAGACCTTGGCT TGCAGCCGGCACAGTCTTCACTACAGTAGAAGACCTTGGCT < 41bp 0.387895185904734 0.783492762119098 0.21676657 0.87571716 prediction 0.566985524238196 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:579515 chr19:579519 synonymous SNV . 0 25 hm5C_associated_SNPs_103405 0 0 24 DDX3X POSTAR2 GSE59096,GSM1427359 chr19:579500-579520
64251 chr9 132636948 132636948 1 + C A UCEC 132636944 + 132636924 132636964 41 TCCTTCCCCCTCGAGGGGCTCGACCTGCGCCCCTTCCTTGC TCCTTCCCCCTCGAGGGGCTCGACATGCGCCCCTTCCTTGC < 41bp 0.374474926710771 0.783445896714216 0.019053161 0.11085078 prediction 0.566891793428433 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132636944 chr9:132636948 nonsynonymous SNV 0.459 1 25 hm5C_associated_SNPs_103411 0 0 1 FXR2 POSTAR2 ENCODE chr9:132636910-132636959
64251 chr17 40717731 40717731 1 + C G rs201779417 40717730 + 40717710 40717750 41 AGTGAAGCCGCGGCTCAAAGCCGGCTGCAGAGCCAGATGAG AGTGAAGCCGCGGCTCAAAGCGGGCTGCAGAGCCAGATGAG < 41bp 0.531982461226528 0.815422296331512 0.85439676 0.9017 prediction 0.566879670209967 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40717730 chr17:40717731 nonsynonymous SNV 0.976 4 22 hm5C_associated_SNPs_103412 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:40717709-40717739
64251 chr15 23811561 23811561 1 + C A HNSC 23811557 + 23811537 23811577 41 CCATTGAGTTTGTTCCAGGGCAGCCCTACCGGGGCCGCTGG CCATTGAGTTTGTTCCAGGGCAGCACTACCGGGGCCGCTGG < 41bp 0.618097916502091 0.901475593345742 0.22548124 0.14781934 prediction 0.566755353687303 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811557 chr15:23811561 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_103419 0 0 2 RBM15 POSTAR2 ENCODE chr15:23811547-23811601
64251 chr16 18584369 18584369 1 + T G UCEC 18584367 + 18584347 18584387 41 ACCTCCGGATGTTCCCCACTCTTCAAAGCCAAGATGGTAGC ACCTCCGGATGTTCCCCACTCTGCAAAGCCAAGATGGTAGC < 41bp 0.520778623361484 0.804042148309027 0.77283996 0.7717271 prediction 0.566527049895087 Functional Gain - ABCC6P1 ENSG00000256340 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:18584367 chr16:18584369 . . 0 23 hm5C_associated_SNPs_103428 0 0 2 GRWD1 POSTAR2 ENCODE chr16:18584313-18584390
64251 chr7 141464431 141464431 1 + T G UCEC 141464429 + 141464409 141464449 41 GAGTTTAAGCTCTATTCTGTCTTTAGGGGAATTGAGGCCAC GAGTTTAAGCTCTATTCTGTCTGTAGGGGAATTGAGGCCAC < 41bp 0.542006571217306 0.825243551335131 0.24095124 0.2433607 prediction 0.56647396023565 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464429 chr7:141464431 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_103433 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:141464398-141464445
64251 chr1 27721073 27721073 1 + C G rs2230880 27721072 + 27721052 27721092 41 CGTGGTGCTTGGAGCCTTTGCCGCCTGCTGGTTGCCCTTCA CGTGGTGCTTGGAGCCTTTGCGGCCTGCTGGTTGCCCTTCA < 41bp 0.531919773304655 0.815142977018001 0.89427996 0.9111678 prediction 0.566446407426692 Functional Gain - GPR3 ENSG00000181773 CDS Human protein_coding chr1:27721072 chr1:27721073 synonymous SNV . 0 22 hm5C_associated_SNPs_103435 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:27721038-27721085
64251 chr17 43183420 43183420 1 + C G rs16939858 43183419 + 43183399 43183439 41 TCTTTAATGAAAAGCTGAATCCAGATCATTCCTCAGAATGA TCTTTAATGAAAAGCTGAATCGAGATCATTCCTCAGAATGA < 41bp 0.4953198170987 0.783155557584803 0.39982605 0.8703817 prediction 0.566311115169607 Functional Gain - NMT1 ENSG00000136448 UTR3 Human protein_coding chr17:43183419 chr17:43183420 . . 0 22 hm5C_associated_SNPs_103441 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr17:43183315-43183421
64251 chr1 173837516 173837516 1 + C A rs188282970 173837512 + 173837492 173837532 41 TCACTTCCGGGACGGTGTTCCGGCCCATTCCGGCCCATTTC TCACTTCCGGGACGGTGTTCCGGCACATTCCGGCCCATTTC < 41bp 0.587673311747082 0.870799399321952 0.9006723 0.90243185 prediction 0.566252175149739 Functional Gain - ZBTB37 ENSG00000234741 ncRNA_intronic Human processed_transcript chr1:173837512 chr1:173837516 . . 0 25 hm5C_associated_SNPs_103442 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:173837508-173837540
64251 chr1 161645092 161645092 1 + C A LUAD 161645088 + 161645068 161645108 41 GCAGGGAAATGGGAGAGACCCTCCCTGAGAAACCAGGTGAG GCAGGGAAATGGGAGAGACCCTCCATGAGAAACCAGGTGAG < 41bp 0.638813674289549 0.921916519190675 0.36516297 0.94184947 prediction 0.566205689802252 Functional Gain - FCGR2B ENSG00000072694 CDS Human protein_coding chr1:161645088 chr1:161645092 nonsynonymous SNV 0.025 3 25 hm5C_associated_SNPs_103444 0 0 1 SND1 POSTAR2 ENCODE chr1:161645046-161645105
64251 chr1 28880177 28880177 1 + T G UCEC 28880175 + 28880155 28880195 41 GAACCCTACATGGATGAGAACTTCATCTCCAGAGCCTTTGC GAACCCTACATGGATGAGAACTGCATCTCCAGAGCCTTTGC < 41bp 0.454213026613999 0.783086944199613 0.04215443 0.09182978 prediction 0.566173888399227 Functional Gain - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28880175 chr1:28880177 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_103445 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:28880145-28880178
64251 chr11 397119 397119 1 + C G LUAD 397115 + 397095 397135 41 GTCTGAGCAGCTGGAGCCCGCGGCCACCTCCACCTACAGGG GTCTGAGCAGCTGGAGCCCGCGGCGACCTCCACCTACAGGG < 41bp 0.505134957651748 0.788216751788984 0.88442314 0.93062043 prediction 0.566163588274472 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:397115 chr11:397119 synonymous SNV . 0 25 hm5C_associated_SNPs_103446 0 0 2 FMR1 POSTAR2 ENCODE chr11:397118-397176
64251 chr15 40764103 40764103 1 + C G OV 40764102 + 40764082 40764122 41 CGCAACAAGTTTGGCGAGATCCGAGAGTACCAGCAACGCTA CGCAACAAGTTTGGCGAGATCGGAGAGTACCAGCAACGCTA < 41bp 0.520917204926367 0.803992622264439 0.8965452 0.9096433 prediction 0.566150834676145 Functional Gain - CHST14 ENSG00000169105 CDS Human protein_coding chr15:40764102 chr15:40764103 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_103448 0 0 1 SND1 POSTAR2 ENCODE chr15:40764009-40764104
64251 chr11 33047436 33047436 1 + T G UCEC 33047433 + 33047413 33047453 41 AGTGGTGAGAGTGTGTCAAGCGCTTATGGACTACAAAGTAT AGTGGTGAGAGTGTGTCAAGCGCGTATGGACTACAAAGTAT < 41bp 0.407959508361273 0.78301704139674 0.040032625 0.06483865 prediction 0.566034082793479 Functional Gain - DEPDC7 ENSG00000121690 CDS Human protein_coding chr11:33047433 chr11:33047436 nonsynonymous SNV 0.878 4 24 hm5C_associated_SNPs_103455 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:33047414-33047450
64251 chr11 14276139 14276139 1 + T G UCEC 14276137 + 14276117 14276157 41 CATTTAATGTCCTTCCTGACCATGATGGGCCCTAGTCCCGA CATTTAATGTCCTTCCTGACCAGGATGGGCCCTAGTCCCGA < 41bp 0.56613153486575 0.849147196085557 0.16825655 0.86530614 prediction 0.566031322439614 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:14276137 chr11:14276139 . 1.000 2 23 hm5C_associated_SNPs_103456 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:14276121-14276174
64251 chr9 131898801 131898801 1 + C A rs17508881 131898797 + 131898777 131898817 41 GAAAACATACAGGATGGAGCCAGCCGGCAGCCAGGGAGTGT GAAAACATACAGGATGGAGCCAGCAGGCAGCCAGGGAGTGT < 41bp 0.388235852504538 0.782984488074702 0.23931918 0.2557401 prediction 0.565968976149405 Functional Gain - PTPA ENSG00000119383 CDS Human protein_coding chr9:131898797 chr9:131898801 synonymous SNV . 0 25 hm5C_associated_SNPs_103459 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:131898792-131898823
64251 chr1 171765655 171765655 1 + T G LAML 171765653 + 171765633 171765673 41 CTCAACCTTGTGTGCCGAGACTTGGGGCTAAAAGACTCAGT CTCAACCTTGTGTGCCGAGACTGGGGGCTAAAAGACTCAGT < 41bp 0.463287820969455 0.782948327625538 0.25642538 0.56031835 prediction 0.565896655251076 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171765653 chr1:171765655 nonsynonymous SNV 0.719 1 23 hm5C_associated_SNPs_103463 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:171765633-171765661
64251 chr19 5119802 5119802 1 + C G rs544905618 5119801 + 5119781 5119821 41 GGCTGGGCCGGAGGTTGACCCCGAGGAGGAGGAGGAGGAGC GGCTGGGCCGGAGGTTGACCCGGAGGAGGAGGAGGAGGAGC < 41bp 0.537306316071593 0.820253520229505 0.31162977 0.886583 prediction 0.565894408315824 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5119801 chr19:5119802 synonymous SNV . 0 22 hm5C_associated_SNPs_103464 0 0 15 BUD13 POSTAR2 ENCODE chr19:5119779-5119873
64251 chr19 3736275 3736275 1 + C G SKCM 3736274 + 3736254 3736294 41 TCCGGGGTGCAGGCGGGCAGCCCGGCCGACGGGCAGGGCAT TCCGGGGTGCAGGCGGGCAGCGCGGCCGACGGGCAGGGCAT < 41bp 0.528035808222609 0.810980568064772 0.8297372 0.88038266 prediction 0.565889519684326 Functional Gain - TJP3 ENSG00000105289 CDS Human protein_coding chr19:3736274 chr19:3736275 nonsynonymous SNV 0.907 2 22 hm5C_associated_SNPs_103465 0 0 1 PPIG POSTAR2 ENCODE chr19:3736245-3736316
64251 chr15 100246981 100246981 1 + C G rs3730283 100246980 + 100246960 100247000 41 AGCCACTCAACCTCTTGCTACCCCAGTCGTGTCTGTGACAA AGCCACTCAACCTCTTGCTACGCCAGTCGTGTCTGTGACAA < 41bp 0.485631507962102 0.782907405791117 0.013029933 0.035731226 prediction 0.565814811582234 Functional Gain - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100246980 chr15:100246981 synonymous SNV . 0 22 hm5C_associated_SNPs_103469 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:100246967-100246997
64251 chr16 69496677 69496677 1 + T G rs546818684 69496675 + 69496655 69496695 41 TTCCTCTCTTCACTGGTTTCCATGAGTACCCTTATATTTCA TTCCTCTCTTCACTGGTTTCCAGGAGTACCCTTATATTTCA < 41bp 0.554687563448935 0.83750694389383 0.10287583 0.4439775 prediction 0.565638760889789 Functional Gain - CYB5B ENSG00000103018 UTR3 Human protein_coding chr16:69496675 chr16:69496677 . . 0 23 hm5C_associated_SNPs_103486 0 0 13 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:69496622-69496678
64251 chrX 151869630 151869630 1 + C A OV 151869626 + 151869606 151869646 41 CTGACCTGGAGTCTGAGTTCCAAGCAGCACTCAGTAGGAAG CTGACCTGGAGTCTGAGTTCCAAGAAGCACTCAGTAGGAAG < 41bp 0.398241842464403 0.782802808767775 0.2512118 0.3048094 prediction 0.565605617535549 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869626 chrX:151869630 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_103488 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:151869620-151869652
64251 chr1 62902820 62902820 1 + C A rs375113601 62902816 + 62902796 62902836 41 TGCTTGTTGCGCTCCTGGCTCTCCCGGGGCGGGCGCAGATG TGCTTGTTGCGCTCCTGGCTCTCCAGGGGCGGGCGCAGATG < 41bp 0.462549555669492 0.782700972905623 0.32138032 0.95387995 prediction 0.565401945811246 Functional Gain - USP1 ENSG00000162607 UTR5 Human protein_coding chr1:62902816 chr1:62902820 . . 0 25 hm5C_associated_SNPs_103497 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:62902780-62902820
64251 chrX 48340805 48340805 1 + C A LUAD 48340801 + 48340781 48340821 41 TGTTCCTAAGACCCAGATTTCAACCAGCTGGATGGTCCCAC TGTTCCTAAGACCCAGATTTCAACAAGCTGGATGGTCCCAC < 41bp 0.368473990439499 0.782690248275393 0.082838595 0.22481576 prediction 0.565380496550785 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48340801 chrX:48340805 nonsynonymous SNV 0.969 1 25 hm5C_associated_SNPs_103500 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chrX:48340791-48340812
64251 chr16 1816059 1816059 1 + C A UCEC 1816055 + 1816035 1816075 41 GATGGCGTGCTGGCCGGTATCACCCTGGTGGGCTGTGCCAC GATGGCGTGCTGGCCGGTATCACCATGGTGGGCTGTGCCAC < 41bp 0.633666876630319 0.916328800461084 0.7938212 0.89579314 prediction 0.56532384766153 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1816055 chr16:1816059 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_103503 0 0 2 LSM11 POSTAR2 ENCODE chr16:1816059-1816111
64251 chr19 2247812 2247812 1 + C G STAD 2247811 + 2247791 2247831 41 TGGAGAAGCCCCCGGCTCCACCCAGCCTCCCTGCTGGCCCC TGGAGAAGCCCCCGGCTCCACGCAGCCTCCCTGCTGGCCCC < 41bp 0.529457602614502 0.812101311521811 0.045555264 0.17926061 prediction 0.565287417814618 Functional Gain - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2247811 chr19:2247812 nonsynonymous SNV 0.640 1 22 hm5C_associated_SNPs_103507 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:2247789-2247840
64251 chr20 42695418 42695418 1 + C G LUAD 42695414 + 42695394 42695434 41 CCCAGCAGCTCGGGATCCTGCTCACCTGGCCCATCCAACCC CCCAGCAGCTCGGGATCCTGCTCAGCTGGCCCATCCAACCC < 41bp 0.501493041729489 0.784108466388208 0.055838495 0.13656628 prediction 0.565230849317438 Functional Gain - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695414 chr20:42695418 nonsynonymous SNV 0.909 1 25 hm5C_associated_SNPs_103508 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:42695401-42695422
64251 chr22 41903841 41903841 1 + C G rs141772938 41903840 + 41903820 41903860 41 GAGAAGATTGTGTATGGACACCTGGATGACCCCGCCAGCCA GAGAAGATTGTGTATGGACACGTGGATGACCCCGCCAGCCA < 41bp 0.540797267197274 0.82338744649811 0.32511285 0.73657274 prediction 0.565180358601671 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41903840 chr22:41903841 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_103509 1 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:41903816-41903855
64251 chr12 52452615 52452615 1 + C A BRCA 52452611 + 52452591 52452631 41 CGTCTGTTGGGCAAACTGCCCGAGCTGCGGACCCTGTGCAC CGTCTGTTGGGCAAACTGCCCGAGATGCGGACCCTGTGCAC < 41bp 0.608965800486233 0.891451407537814 0.7984544 0.916467 prediction 0.564971214103162 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52452611 chr12:52452615 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103521 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:52452596-52452626
64251 chr11 74204727 74204727 1 - A C rs4944895 74204730 - 74204710 74204750 41 CGATGCGGCAACCCGCCGTTCGGTTGGTGCGCCTGGGTCGG CGATGCGGCAACCCGCCGTTCGGGTGGTGCGCCTGGGTCGG < 41bp 0.60285744457007 0.885305287526682 0.58102024 0.90631676 prediction 0.564895685913224 Functional Gain - LIPT2 ENSG00000175536 CDS Human protein_coding chr11:74204730 chr11:74204727 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_103523 0 0 1 DDX3X POSTAR2 ENCODE chr11:74204678-74204738
64251 chr22 45128218 45128218 1 + C G rs150104103 45128217 + 45128197 45128237 41 AAGCTAGAGGATGCGCTGGCCCGGGCCCATGCCCGTGTGCC AAGCTAGAGGATGCGCTGGCCGGGGCCCATGCCCGTGTGCC < 41bp 0.480488420323627 0.782442593866028 0.4189783 0.9064132 prediction 0.564885187732056 Functional Gain - PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45128217 chr22:45128218 nonsynonymous SNV 0.847 2 22 hm5C_associated_SNPs_103524 0 0 2 SLTM POSTAR2 ENCODE chr22:45128202-45128242
64251 chr15 39877708 39877708 1 + T C KIRC 39877706 + 39877686 39877726 41 TGCAAAAAGGTGTCCTGCCCCATCATGCCCTGCTCCAATGC TGCAAAAAGGTGTCCTGCCCCACCATGCCCTGCTCCAATGC < 41bp 0.512177555201189 0.794610363681187 0.10483971 0.06659359 prediction 0.564865616959996 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39877706 chr15:39877708 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_103526 0 0 2 RPS3 POSTAR2 ENCODE chr15:39877693-39877734
64251 chr9 140510315 140510315 1 - G T UCEC 140510319 - 140510299 140510339 41 AAATGCTGTTCCACAGAACCCTGCCTTTCAGGCCTTGGAGA AAATGCTGTTCCACAGAACCCTGCATTTCAGGCCTTGGAGA < 41bp 0.390067702978398 0.782398379486549 0.10282263 0.16129401 prediction 0.564796758973097 Functional Gain - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510319 chr9:140510315 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_103530 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:140510304-140510355
64251 chr19 54198501 54198501 1 + T G STAD 54198498 + 54198478 54198518 41 CCTCTAGAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGAA CCTCTAGAGGGAAGCGCTTTCTGGTGTCTGAAAGAAAAGAA < 41bp 0.552008742355545 0.834400210677558 0.19773445 0.33429676 prediction 0.564782936644026 Functional Gain - MIR519B ENSG00000207825 ncRNA_exonic Human miRNA chr19:54198498 chr19:54198501 . . 0 24 hm5C_associated_SNPs_103532 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:54198500-54198520
64251 chr6 37142034 37142034 1 + C A rs2070892 37142030 + 37142010 37142050 41 AGATCCCAGGCCCCTGGAGGCTGCCTCCCAACAGTGGGGAA AGATCCCAGGCCCCTGGAGGCTGCATCCCAACAGTGGGGAA < 41bp 0.385326824465849 0.782360405696562 0.10604039 0.14679879 prediction 0.564720811393123 Functional Gain - PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142030 chr6:37142034 . . 0 25 hm5C_associated_SNPs_103533 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:37142009-37142041
64251 chr19 57802628 57802628 1 + C A OV 57802624 + 57802604 57802644 41 ACTTCAACCGCAGGTCACACCTCACACGGCACCAGCGGACT ACTTCAACCGCAGGTCACACCTCAAACGGCACCAGCGGACT < 41bp 0.360081187269596 0.782348087574219 0.019907266 0.16415128 prediction 0.564696175148438 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57802624 chr19:57802628 nonsynonymous SNV 0.149 1 25 hm5C_associated_SNPs_103535 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:57802418-57802692
64251 chr19 39395721 39395721 1 + C A LIHC 39395717 + 39395697 39395737 41 GGATTTTCTTCTAGGCTTCTCGGCCGGCACTGAGTACATGG GGATTTTCTTCTAGGCTTCTCGGCAGGCACTGAGTACATGG < 41bp 0.623093754888446 0.905419037968416 0.38678327 0.48411766 prediction 0.564650566159939 Functional Gain - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39395717 chr19:39395721 synonymous SNV . 0 25 hm5C_associated_SNPs_103538 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:39395677-39395739
64251 chr10 99995881 99995881 1 + C G rs144632612 99995880 + 99995860 99995900 41 TCGAAGTAAGCAGAGCAAAACCGAACGAGAAGCAGAGCTCA TCGAAGTAAGCAGAGCAAAACGGAACGAGAAGCAGAGCTCA < 41bp 0.486252099216386 0.782281565079693 0.7049532 0.8730625 prediction 0.564563130159387 Functional Gain - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99995880 chr10:99995881 synonymous SNV . 0 22 hm5C_associated_SNPs_103546 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:99995880-99995913
64251 chr16 1826215 1826215 1 + T A PRAD 1826211 + 1826191 1826231 41 CTTCCTGACCACAGCCAACCCTGATCTCCTGCTGGACCTGG CTTCCTGACCACAGCCAACCCTGAACTCCTGCTGGACCTGG < 41bp 0.518618642617407 0.800899186857281 0.120951235 0.3699475 prediction 0.564561088479749 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1826211 chr16:1826215 nonsynonymous SNV 0.103 0 25 hm5C_associated_SNPs_103547 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:1826199-1826235
64251 chr1 233463663 233463663 1 + C A rs544380092 233463659 + 233463639 233463679 41 GCCGTCACCGATCGCGATTCCTACCCCCTCGCCTTCCCCCG GCCGTCACCGATCGCGATTCCTACACCCTCGCCTTCCCCCG < 41bp 0.466494765224937 0.78224127315194 0.039441586 0.38152114 prediction 0.56448254630388 Functional Gain - MAP3K21 ENSG00000143674 UTR5 Human protein_coding chr1:233463659 chr1:233463663 . . 0 25 hm5C_associated_SNPs_103550 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:233463642-233463679
64251 chr11 62557581 62557581 1 + C A rs78079991 62557577 + 62557557 62557597 41 TGCCCAAGTGCCTGTAATCCCCCCCCTCAAGGCCCTGTTTA TGCCCAAGTGCCTGTAATCCCCCCACTCAAGGCCCTGTTTA < 41bp 0.396331417502868 0.782206304326525 0.02317065 0.056786478 prediction 0.564412608653051 Functional Gain - TMEM179B ENSG00000168569;ENSG00000185475 UTR3 Human other chr11:62557577 chr11:62557581 . . 0 25 hm5C_associated_SNPs_103552 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62557511-62557641
64251 chr8 23428924 23428924 1 + C G rs79810688 23428923 + 23428903 23428943 41 CATCCGGACGGTGTGGAGGACCGAGGGGTTGGGGGCCTTCT CATCCGGACGGTGTGGAGGACGGAGGGGTTGGGGGCCTTCT < 41bp 0.532469064972576 0.814674413735965 0.8878937 0.9176776 prediction 0.564410697526779 Functional Gain - SLC25A37 ENSG00000147454 CDS Human protein_coding chr8:23428923 chr8:23428924 synonymous SNV . 0 22 hm5C_associated_SNPs_103553 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:23428897-23428932
64251 chr7 65217260 65217260 1 + C G rs567217501 65217259 + 65217239 65217279 41 ACTAAAAATACAAAAATTAGCCGGGCACGGTCCTGCACAGT ACTAAAAATACAAAAATTAGCGGGGCACGGTCCTGCACAGT < 41bp 0.496048391722695 0.782176801030928 0.6734909 0.9315538 prediction 0.564353602061856 Functional Gain - CCT6P1;LOC441242 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65217259 chr7:65217260 . . 0 22 hm5C_associated_SNPs_103557 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:65217249-65217281
64251 chr2 187627333 187627333 1 + C G BRCA 187627332 + 187627312 187627352 41 GTGGAACCACCGTCTGTTCCCCTGAGGACCCAGCTTTAAGG GTGGAACCACCGTCTGTTCCCGTGAGGACCCAGCTTTAAGG < 41bp 0.483793684949679 0.782088525051141 0.09966153 0.29271987 prediction 0.564177050102282 Functional Gain - FAM171B ENSG00000144369 CDS Human protein_coding chr2:187627332 chr2:187627333 nonsynonymous SNV 0.980 4 22 hm5C_associated_SNPs_103566 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr2:187627315-187627335
64251 chr15 25311351 25311351 1 + T G rs78962900 25311349 + 25311329 25311369 41 GGCACTGCCGTGGAGAGTCTCTTGATTTGGGATGCCTCCTC GGCACTGCCGTGGAGAGTCTCTGGATTTGGGATGCCTCCTC < 41bp 0.459421536307564 0.782086703505501 0.75654453 0.8559934 prediction 0.564173407011002 Functional Gain - SNHG14 ENSG00000224078 ncRNA_intronic Human processed_transcript chr15:25311349 chr15:25311351 . . 0 23 hm5C_associated_SNPs_103567 0 0 1 RPS5 POSTAR2 ENCODE chr15:25311327-25311358
64251 chr10 45869715 45869715 1 + C A rs377286166 45869711 + 45869691 45869731 41 GAGGCTCCCGGCGCTCGCTGCTCCCGCGGCCCGCGCCATGC GAGGCTCCCGGCGCTCGCTGCTCCAGCGGCCCGCGCCATGC < 41bp 0.501469401427027 0.783529985731952 0.22474846 0.9342052 prediction 0.564121168609849 Functional Gain - ALOX5 ENSG00000012779 UTR5 Human protein_coding chr10:45869711 chr10:45869715 . . 0 25 hm5C_associated_SNPs_103570 0 0 1 DDX3X POSTAR2 ENCODE chr10:45869693-45869769
64251 chr19 39905660 39905660 1 + C G rs144626871 39905659 + 39905639 39905679 41 AGCCCCCACCATGGCCTCCCCCCGAGGTTCTGGGAGCTCCA AGCCCCCACCATGGCCTCCCCGCGAGGTTCTGGGAGCTCCA < 41bp 0.474838172001039 0.782048080222052 0.392835 0.76543045 prediction 0.564096160444105 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39905659 chr19:39905660 synonymous SNV . 0 22 hm5C_associated_SNPs_103572 0 0 4 BUD13 POSTAR2 ENCODE chr19:39905605-39905669
64251 chr2 200820552 200820552 1 + T A OV 200820548 + 200820528 200820568 41 CTGGCCGCTCGTTTGCTACCCCAGTTCCTGCACTCTCGGTC CTGGCCGCTCGTTTGCTACCCCAGATCCTGCACTCTCGGTC < 41bp 0.520267764617842 0.802294337555429 0.50157887 0.38759494 prediction 0.564053145875173 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820548 chr2:200820552 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_103575 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:200820542-200820577
64251 chr2 102446002 102446002 1 + C G SKCM 102446001 + 102445981 102446021 41 CACATTCATCATGTGATTCACCGGGATATCAAGGGCCAGAA CACATTCATCATGTGATTCACGGGGATATCAAGGGCCAGAA < 41bp 0.496616084416124 0.781964852376847 0.7874646 0.9371662 prediction 0.563929704753695 Functional Gain - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102446001 chr2:102446002 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_103578 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:102445990-102446048
64251 chr1 43124576 43124576 1 + T G UCEC 43124574 + 43124554 43124594 41 GTGCCTAAGACGGCCGAGAACTTTAGGTAAGGACGTGCTCC GTGCCTAAGACGGCCGAGAACTGTAGGTAAGGACGTGCTCC < 41bp 0.498786092546308 0.781953989549975 0.3930661 0.3120039 prediction 0.56390797909995 Functional Gain - PPIH ENSG00000171960 CDS Human protein_coding chr1:43124574 chr1:43124576 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_103580 0 0 9 BUD13 POSTAR2 ENCODE chr1:43124555-43124576
64251 chr19 48953686 48953686 1 + C A UCEC 48953682 + 48953662 48953702 41 GGAGGAGCCCCAGGCCCTGGCAGCCTTCCTCCGGGATGAGC GGAGGAGCCCCAGGCCCTGGCAGCATTCCTCCGGGATGAGC < 41bp 0.367490407390323 0.781885190314472 0.394257 0.37947342 prediction 0.563770380628944 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48953682 chr19:48953686 synonymous SNV . 0 25 hm5C_associated_SNPs_103586 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr19:48953672-48953698
64251 chr11 66613002 66613002 1 + T G BRCA 66612999 + 66612979 66613019 41 TTCTCCTACACAGCTGTCTTCGGTGCCTACACTGCTTTCCT TTCTCCTACACAGCTGTCTTCGGGGCCTACACTGCTTTCCT < 41bp 0.387826535560512 0.781881099824073 0.59905493 0.9430649 prediction 0.563762199648147 Functional Gain - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66612999 chr11:66613002 synonymous SNV . 0 24 hm5C_associated_SNPs_103587 0 0 1 DDX24 POSTAR2 ENCODE chr11:66612998-66613037
64251 chr19 15757912 15757912 1 + C A COAD 15757908 + 15757888 15757928 41 TTCTACAGCTTCCTGAAGCCCTGGCTGGGTGAGTATCTGTA TTCTACAGCTTCCTGAAGCCCTGGATGGGTGAGTATCTGTA < 41bp 0.458499044414656 0.781853558821505 0.025313467 0.09152159 prediction 0.563707117643011 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15757908 chr19:15757912 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_103589 0 0 1 GRWD1 POSTAR2 ENCODE chr19:15757883-15757918
64251 chr1 1961533 1961533 1 + T A LUAD 1961529 + 1961509 1961549 41 GTCCCGGGGAACCTGATGGGCTCCTACAGGTCGGTGGGGGT GTCCCGGGGAACCTGATGGGCTCCAACAGGTCGGTGGGGGT < 41bp 0.46172379963191 0.781843514004006 0.042353004 0.89132273 prediction 0.563687028008012 Functional Gain - GABRD ENSG00000187730 CDS Human protein_coding chr1:1961529 chr1:1961533 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_103590 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:1961528-1961548
64251 chr10 24790396 24790396 1 + C A LUSC 24790392 + 24790372 24790412 41 GCCTCCACCTGTGGGCACCTCAGCCATCCACATGAGCCTGC GCCTCCACCTGTGGGCACCTCAGCAATCCACATGAGCCTGC < 41bp 0.433130288929854 0.781815009546583 0.14179847 0.13910279 prediction 0.563630019093166 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24790392 chr10:24790396 synonymous SNV . 0 25 hm5C_associated_SNPs_103593 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24790313-24790461
64251 chr1 45808095 45808095 1 + C G KIRP 45808094 + 45808074 45808114 41 CAGTCAGTACGGACCCTATTCCTGGAGCTAATCCGAGCCCG CAGTCAGTACGGACCCTATTCGTGGAGCTAATCCGAGCCCG < 41bp 0.478344598000704 0.781808340145296 0.22758898 0.37750965 prediction 0.563616680290592 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45808094 chr1:45808095 nonsynonymous SNV 0.966 1 22 hm5C_associated_SNPs_103594 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:45808085-45808097
64251 chr12 118456893 118456893 1 + C A HNSC 118456889 + 118456869 118456909 41 TATTTCAGGGTTGAAAAATACCGGCCACAGACCCTGAATGA TATTTCAGGGTTGAAAAATACCGGACACAGACCCTGAATGA < 41bp 0.396225573906396 0.781800023776032 0.21053645 0.2916484 prediction 0.563600047552063 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118456889 chr12:118456893 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_103596 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:118456880-118456900
64251 chr2 130940017 130940017 1 + C A rs201954757 130940013 + 130939993 130940033 41 GGCGGGCGGCGCTATCGACCCCGACGTGTTCAAGTGAGCGG GGCGGGCGGCGCTATCGACCCCGAAGTGTTCAAGTGAGCGG < 41bp 0.421970951388093 0.781792189112643 0.032125443 0.20881191 prediction 0.563584378225286 Functional Gain - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130940013 chr2:130940017 nonsynonymous SNV 0.816 1 25 hm5C_associated_SNPs_103597 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:130939966-130940026
64251 chr1 162326913 162326913 1 + T A SKCM 162326909 + 162326889 162326929 41 AGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGGTT AGCAGCAGCAGCAGCAGACACAAGAGGCTGTGGCCCAGGTT < 41bp 0.506175613275324 0.787947557246919 0.177338 0.2993852 prediction 0.563543887943191 Functional Gain - NOS1AP ENSG00000198929 CDS Human protein_coding chr1:162326909 chr1:162326913 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103602 0 0 1 PRPF8 POSTAR2 ENCODE chr1:162326897-162326973
64251 chr16 3535505 3535505 1 + C G rs73489662 3535501 + 3535481 3535521 41 CTCCCTGCTTCTGGAAACCTCTGCCTGCTGCCCTGGCCCTG CTCCCTGCTTCTGGAAACCTCTGCGTGCTGCCCTGGCCCTG < 41bp 0.498197623971053 0.781765256418521 0.12938479 0.14559007 prediction 0.563530512837041 Functional Gain - NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3535501 chr16:3535505 . . 0 25 hm5C_associated_SNPs_103603 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3535494-3535528
64251 chr6 43484884 43484884 1 + C G PRAD 43484883 + 43484863 43484903 41 GCGGTGGAGGAAATGCGGAGCCGCGTGGTTCTGGGGGAGTT GCGGTGGAGGAAATGCGGAGCGGCGTGGTTCTGGGGGAGTT < 41bp 0.530507618668098 0.812266813369472 0.63325316 0.8666673 prediction 0.563518389402749 Functional Gain - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43484883 chr6:43484884 nonsynonymous SNV 0.960 3 22 hm5C_associated_SNPs_103604 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:43484880-43484900
64251 chr20 35060836 35060836 1 + C A LUAD 35060832 + 35060812 35060852 41 GCCGCCAGGCAGAACGCAGCCAGCCACGCTACTTCATGCAC GCCGCCAGGCAGAACGCAGCCAGCAACGCTACTTCATGCAC < 41bp 0.361919464584748 0.781746117637668 0.059170187 0.09257108 prediction 0.563492235275336 Functional Gain - DLGAP4 ENSG00000080845 CDS Human protein_coding chr20:35060832 chr20:35060836 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_103606 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:35060804-35060849
64251 chr1 52705135 52705135 1 + C G rs142234365 52705134 + 52705114 52705154 41 TGGTCAGTTTGGAATTTCTGCCAGAAAGCCATTCACCACTC TGGTCAGTTTGGAATTTCTGCGAGAAAGCCATTCACCACTC < 41bp 0.49837784231289 0.781738877735519 0.09019035 0.7958662 prediction 0.563477755471038 Functional Gain - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52705134 chr1:52705135 synonymous SNV . 0 22 hm5C_associated_SNPs_103608 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:52705109-52705135
64251 chr11 116703588 116703588 1 + C A LUSC 116703584 + 116703564 116703604 41 CCCTGAGGTCAGACCAACTTCAGCCGTGGCTGCCTGAGACC CCCTGAGGTCAGACCAACTTCAGCAGTGGCTGCCTGAGACC < 41bp 0.621092402029161 0.902795802130947 0.38238165 0.43561482 prediction 0.56340680020357 Functional Gain - APOC3 ENSG00000110245 CDS Human protein_coding chr11:116703584 chr11:116703588 synonymous SNV . 0 25 hm5C_associated_SNPs_103612 0 0 8 DDX55 POSTAR2 ENCODE chr11:116703578-116703602
64251 chr16 84812561 84812561 1 + T A COAD 84812557 + 84812537 84812577 41 ATTACACTACAGACGTCTTCCAGATCGGTCTGAATGGCTGG ATTACACTACAGACGTCTTCCAGAACGGTCTGAATGGCTGG < 41bp 0.530864266116074 0.812499633062683 0.113175064 0.057456344 prediction 0.563270733893218 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84812557 chr16:84812561 nonsynonymous SNV 0.983 3 25 hm5C_associated_SNPs_103616 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:84812537-84812579
64251 chr11 43877569 43877569 1 + C A rs533617306 43877565 + 43877545 43877585 41 ACCCTGACCCAGAAAAGTGGCTTGCTTGGACACCCAGCTGC ACCCTGACCCAGAAAAGTGGCTTGATTGGACACCCAGCTGC < 41bp 0.439588271995579 0.781618277741218 0.26730305 0.2692598 prediction 0.563236555482437 Functional Gain - HSD17B12 ENSG00000246250 ncRNA_intronic Human antisense chr11:43877565 chr11:43877569 . . 0 25 hm5C_associated_SNPs_103617 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:43877511-43877596
64251 chr11 69466115 69466115 1 + C A rs7177 69466111 + 69466091 69466131 41 GGCGGAGCCGGCCCCAGGTGCTCCCCTGACAGTCCCTCCTC GGCGGAGCCGGCCCCAGGTGCTCCACTGACAGTCCCTCCTC < 41bp 0.621888164537088 0.903492744590485 0.030739218 0.45872563 prediction 0.563209160106793 Functional Gain - CCND1 ENSG00000110092 UTR3 Human protein_coding chr11:69466111 chr11:69466115 . . 0 25 hm5C_associated_SNPs_103621 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:69466115-69466152
64251 chr7 6057570 6057570 1 + C G rs545201082 6057569 + 6057549 6057589 41 GTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTG GTCCACGGTGCACACGCACTCGTCGGTCAAGAGCGTGCCTG < 41bp 0.475329068527339 0.781582473777927 0.052149802 0.71288574 prediction 0.563164947555854 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057569 chr7:6057570 synonymous SNV . 0 22 hm5C_associated_SNPs_103623 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:6057560-6057580
64251 chr7 2473256 2473256 1 + C A UCEC 2473252 + 2473232 2473272 41 GAGCACTGGCGGCAGGTGTACCGCCTCTGCCACCCGTGCCA GAGCACTGGCGGCAGGTGTACCGCATCTGCCACCCGTGCCA < 41bp 0.386080073254563 0.781536601158685 0.24797705 0.28796798 prediction 0.563073202317369 Functional Gain - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2473252 chr7:2473256 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103625 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:2473249-2473313
64251 chr6 26022200 26022200 1 + T G CESC 26022198 + 26022178 26022218 41 TTAAGCGCCAGGGACGCACCCTTTATGGCTTTGGCGGTTAA TTAAGCGCCAGGGACGCACCCTGTATGGCTTTGGCGGTTAA < 41bp 0.477869403472367 0.781507781096221 0.04522845 0.05840242 prediction 0.563015562192443 Functional Gain - HIST1H4A ENSG00000196176 CDS Human other chr6:26022198 chr6:26022200 synonymous SNV . 0 23 hm5C_associated_SNPs_103632 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26021880-26022220
64251 chr19 19168318 19168318 1 + C A BRCA 19168314 + 19168294 19168334 41 CTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCA CTGGGGGCTGAGGCACTCATCATGAAGGCCCGATCTGCCCA < 41bp 0.615188149077061 0.89669063424129 0.2513091 0.38656664 prediction 0.563004970328458 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19168314 chr19:19168318 nonsynonymous SNV 0.017 0 25 hm5C_associated_SNPs_103633 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:19168303-19168322
64251 chr4 30722099 30722099 1 + T G rs375045514 30722096 + 30722076 30722116 41 ACCCAAACTTGGGCACCGCACGGTGCGCACTGCTCAGCCTT ACCCAAACTTGGGCACCGCACGGGGCGCACTGCTCAGCCTT < 41bp 0.419238952871307 0.78148712469192 0.4312782 0.9512987 prediction 0.56297424938384 Functional Gain - PCDH7 ENSG00000169851 UTR5 Human protein_coding chr4:30722096 chr4:30722099 . . 0 24 hm5C_associated_SNPs_103635 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:30722093-30722124
64251 chr1 9787519 9787519 1 + C G rs531510973 9787515 + 9787495 9787535 41 CGACAGGATGCCTTGATCCTCGTGCGACCCACCCTGTGTAT CGACAGGATGCCTTGATCCTCGTGGGACCCACCCTGTGTAT < 41bp 0.505317662897847 0.786771071291538 0.26812243 0.55995065 prediction 0.562906816787381 Functional Gain - PIK3CD ENSG00000171608 UTR3 Human protein_coding chr1:9787515 chr1:9787519 . . 0 25 hm5C_associated_SNPs_103637 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9787485-9787547
64251 chr5 169025560 169025560 1 + T G OV 169025558 + 169025538 169025578 41 ACACCTATTATACAGATTTACTTCAGATGAAGCTGGATAAC ACACCTATTATACAGATTTACTGCAGATGAAGCTGGATAAC < 41bp 0.546237830790503 0.827655279761013 0.07819641 0.113161 prediction 0.562834897941021 Functional Gain - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169025558 chr5:169025560 synonymous SNV . 0 23 hm5C_associated_SNPs_103640 0 0 6 NOP58 POSTAR2 GSE43666,GSM1067862 chr5:169025524-169025561
64251 chr10 79687701 79687701 1 + T G rs78485346 79687698 + 79687678 79687718 41 ACGTTGGAATGAGTGGATCTCGCTGGGGGTGAGAGGCACTT ACGTTGGAATGAGTGGATCTCGCGGGGGGTGAGAGGCACTT < 41bp 0.5947294424853 0.876115712790041 0.42170796 0.914863 prediction 0.562772540609482 Functional Gain - DLG5-AS1 ENSG00000233871 ncRNA_intronic Human processed_transcript chr10:79687698 chr10:79687701 . . 0 24 hm5C_associated_SNPs_103642 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:79687671-79687709
64251 chr2 9621568 9621568 1 + T G UCEC 9621566 + 9621546 9621586 41 ACAGCCTGGGAAGAACAGTGCATCATACAAGGTAAACAAAC ACAGCCTGGGAAGAACAGTGCAGCATACAAGGTAAACAAAC < 41bp 0.47399759500399 0.781377543133122 0.36323982 0.54915136 prediction 0.562755086266245 Functional Gain - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9621566 chr2:9621568 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_103644 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:9621539-9621569
64251 chr1 33959192 33959192 1 + T G ESCA 33959190 + 33959170 33959210 41 GATGCTGTCAAACCTTCAACCTTGTGTCCTAAAGCCCCAGA GATGCTGTCAAACCTTCAACCTGGTGTCCTAAAGCCCCAGA < 41bp 0.445615484334701 0.781340394616105 0.07358816 0.22505182 prediction 0.562680789232211 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33959190 chr1:33959192 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_103648 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr1:33959176-33959196
64251 chr17 40996859 40996859 1 + C G SKCM 40996858 + 40996838 40996878 41 AGCTGTGATGCGCTTTCTGACCCAGCGGCTGGGGCCAGGGC AGCTGTGATGCGCTTTCTGACGCAGCGGCTGGGGCCAGGGC < 41bp 0.467870626985312 0.78132023808597 0.13569331 0.28593326 prediction 0.562640476171941 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40996858 chr17:40996859 synonymous SNV . 0 22 hm5C_associated_SNPs_103650 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:40996803-40996860
64251 chr4 159790382 159790382 1 + T G OV 159790380 + 159790360 159790400 41 GTCCAGCGGGGCCCTGGCCTCGTGGCTGGTGCGAATATCCC GTCCAGCGGGGCCCTGGCCTCGGGGCTGGTGCGAATATCCC < 41bp 0.580294652755247 0.861549102227904 0.8205997 0.9359946 prediction 0.562508898945314 Functional Gain - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159790380 chr4:159790382 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_103656 0 0 3 FMR1 POSTAR2 ENCODE chr4:159790301-159790388
64251 chr8 30969283 30969283 1 + T G rs2230011 30969281 + 30969261 30969301 41 GGCGAAAAACAGGGAATATCCTTCAGGATCTGCAGCCATTT GGCGAAAAACAGGGAATATCCTGCAGGATCTGCAGCCATTT < 41bp 0.544020244106751 0.825265651194574 0.07963386 0.16670987 prediction 0.562490814175647 Functional Gain - WRN ENSG00000165392 CDS Human protein_coding chr8:30969281 chr8:30969283 synonymous SNV . 0 23 hm5C_associated_SNPs_103658 1 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr8:30969274-30969292
64251 chr14 73637738 73637738 1 + C G rs139863395 73637737 + 73637717 73637757 41 TAAGTCAGTCAGCTTTTATACCCGGAAGGATGGGCAGCTGT TAAGTCAGTCAGCTTTTATACGCGGAAGGATGGGCAGCTGT < 41bp 0.5194986096968 0.800740836352858 0.09214467 0.28384042 prediction 0.562484453312116 Functional Gain - PSEN1 ENSG00000080815 CDS Human protein_coding chr14:73637737 chr14:73637738 synonymous SNV . 0 22 hm5C_associated_SNPs_103659 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:73637718-73637742
64251 chr9 133750392 133750392 1 + C G CESC 133750391 + 133750371 133750411 41 TCCCCATCAAATGGACTGCACCCGAGAGCCTGGCCTACAAC TCCCCATCAAATGGACTGCACGCGAGAGCCTGGCCTACAAC < 41bp 0.470257223712193 0.781240264335169 0.35860598 0.7576735 prediction 0.562480528670339 Functional Gain - ABL1 ENSG00000097007 CDS Human protein_coding chr9:133750391 chr9:133750392 nonsynonymous SNV 0.983 5 22 hm5C_associated_SNPs_103660 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr9:133750369-133750394
64251 chr10 54074421 54074421 1 + C A LIHC 54074417 + 54074397 54074437 41 ACCCGGGCGGGAATAAGTACCAGACCATTGACAACTACCAG ACCCGGGCGGGAATAAGTACCAGAACATTGACAACTACCAG < 41bp 0.616991156726915 0.898212507703693 0.6158917 0.8148296 prediction 0.562442701953555 Functional Gain - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074417 chr10:54074421 nonsynonymous SNV 0.619 0 25 hm5C_associated_SNPs_103663 0 0 1 RPS3 POSTAR2 ENCODE chr10:54074375-54074438
64251 chr5 112228333 112228333 1 + T A STAD 112228329 + 112228309 112228349 41 TGTCCAAGAGGAAAACACTGCAACTTTCTTCATGTGTTCAG TGTCCAAGAGGAAAACACTGCAACATTCTTCATGTGTTCAG < 41bp 0.507262275270419 0.788452192927051 0.0758594 0.13114935 prediction 0.562379835313265 Functional Gain - SRP19 ENSG00000212643 CDS Human protein_coding chr5:112228329 chr5:112228333 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_103667 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:112228319-112228342
64251 chr7 12668813 12668813 1 + T G ESCA 12668810 + 12668790 12668830 41 GTGGTGACTGCTACATCATACTCTACACCTATCCCAGAGGA GTGGTGACTGCTACATCATACTCGACACCTATCCCAGAGGA < 41bp 0.412571747949139 0.781161697647874 0.50074863 0.34476954 prediction 0.562323395295748 Functional Gain - SCIN ENSG00000006747 CDS Human protein_coding chr7:12668810 chr7:12668813 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_103672 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:12668799-12668826
64251 chr2 27729424 27729424 1 + C A UCEC 27729420 + 27729400 27729440 41 AGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAG AGCCAAAGCCCCAAGATTGCCACCATGATGAAGAGTGTCAG < 41bp 0.348969748410425 0.781141434365896 0.06354499 0.045356095 prediction 0.562282868731792 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27729420 chr2:27729424 nonsynonymous SNV 0.102 3 25 hm5C_associated_SNPs_103673 0 0 5 BUD13 POSTAR2 ENCODE chr2:27729380-27729431
64251 chr7 2671695 2671695 1 + C A rs184558238 2671691 + 2671671 2671711 41 GAGCGCGCGGATGATGCGGGCGGCCAGGCGGGGGTCGACGG GAGCGCGCGGATGATGCGGGCGGCAAGGCGGGGGTCGACGG < 41bp 0.545117461703406 0.82620894407366 0.91764337 0.9147786 prediction 0.562182964740507 Functional Gain - TTYH3 ENSG00000136295 UTR5 Human protein_coding chr7:2671691 chr7:2671695 . . 0 25 hm5C_associated_SNPs_103677 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:2671680-2671700
64251 chr16 88780603 88780603 1 + C G rs73262673 88780602 + 88780582 88780622 41 CTTCATCCTCAGGCTGCAGACCCAGTTCCCCTCCACTGTCA CTTCATCCTCAGGCTGCAGACGCAGTTCCCCTCCACTGTCA < 41bp 0.471154202332558 0.781087698489016 0.044481993 0.2593413 prediction 0.562175396978033 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88780602 chr16:88780603 synonymous SNV . 0 22 hm5C_associated_SNPs_103678 0 0 1 PUM2 POSTAR2 ENCODE chr16:88780576-88780636
64251 chr19 3435102 3435102 1 + C G rs565638062 3435098 + 3435078 3435118 41 AAGGAGCAAGCGGCACAAATCGGGCTCGATGGAGGAAGACG AAGGAGCAAGCGGCACAAATCGGGGTCGATGGAGGAAGACG < 41bp 0.515053245943659 0.796126469011453 0.91007316 0.9354439 prediction 0.562146446135588 Functional Gain - NFIC ENSG00000141905 CDS Human protein_coding chr19:3435098 chr19:3435102 synonymous SNV . 0 25 hm5C_associated_SNPs_103680 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:3435080-3435120
64251 chr1 68150931 68150931 1 + T G rs3783460 68150929 + 68150909 68150949 41 GGCAGCGGCCCAATTAGTGTCGTGCGGCCCGTGGCGAGGCG GGCAGCGGCCCAATTAGTGTCGGGCGGCCCGTGGCGAGGCG < 41bp 0.4676276362682 0.781049207919615 0.3360685 0.71921253 prediction 0.562098415839231 Functional Gain - GADD45A ENSG00000116717 UTR5 Human protein_coding chr1:68150929 chr1:68150931 . . 0 23 hm5C_associated_SNPs_103683 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:68150920-68150940
64251 chr22 26118334 26118334 1 + C G LUSC 26118333 + 26118313 26118353 41 CAGCGGCTATTGCGTCGTGCCCCGAAGTTCCTCAACAAACC CAGCGGCTATTGCGTCGTGCCGCGAAGTTCCTCAACAAACC < 41bp 0.481971663295721 0.781035601610559 0.12972498 0.51711404 prediction 0.562071203221118 Functional Gain - GRK3 ENSG00000100077 CDS Human protein_coding chr22:26118333 chr22:26118334 nonsynonymous SNV 0.290 1 22 hm5C_associated_SNPs_103684 0 0 1 UCHL5 POSTAR2 ENCODE chr22:26118318-26118425
64251 chr16 9185952 9185952 1 + C G KIRC 9185951 + 9185931 9185971 41 CGAGATCCAGGAGCACGGGCCCGAGCACTGGTTCTCCAAGT CGAGATCCAGGAGCACGGGCCGGAGCACTGGTTCTCCAAGT < 41bp 0.489224586112281 0.781029356499383 0.32166016 0.8739567 prediction 0.562058712998766 Functional Gain - C16orf72 ENSG00000182831 CDS Human protein_coding chr16:9185951 chr16:9185952 synonymous SNV . 0 22 hm5C_associated_SNPs_103685 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:9185932-9185968
64251 chr19 15791066 15791066 1 + C G rs61731193 15791065 + 15791045 15791085 41 TCATGTCAGCTGCCATTGCACCCAAGGATAATCTCTTCATC TCATGTCAGCTGCCATTGCACGCAAGGATAATCTCTTCATC < 41bp 0.551297849099009 0.832325920884927 0.022039503 0.047946602 prediction 0.562056143571838 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15791065 chr19:15791066 nonsynonymous SNV 0.008 3 22 hm5C_associated_SNPs_103686 0 0 1 PRPF8 POSTAR2 ENCODE chr19:15791020-15791072
64251 chr17 28706011 28706011 1 + C A rs181199485 28706007 + 28705987 28706027 41 CGCTGCTGGAAGATGGCGAGCGGCCGGGACGAGCGGCCGCC CGCTGCTGGAAGATGGCGAGCGGCAGGGACGAGCGGCCGCC < 41bp 0.591113043624534 0.872121686914419 0.8312167 0.87212694 prediction 0.56201728657977 Functional Gain - CPD ENSG00000108582 CDS Human protein_coding chr17:28706007 chr17:28706011 synonymous SNV . 0 25 hm5C_associated_SNPs_103687 0 0 5 DDX3X POSTAR2 ENCODE chr17:28705966-28706043
64251 chr19 6534800 6534800 1 + T G UCEC 6534797 + 6534777 6534817 41 CGAGGGCTCAGGCTCCGTTTCACTTGCGCTGCACCTGCAGC CGAGGGCTCAGGCTCCGTTTCACGTGCGCTGCACCTGCAGC < 41bp 0.38922655611739 0.780974806578939 0.22750944 0.3042509 prediction 0.561949613157877 Functional Gain - TNFSF9 ENSG00000125657 CDS Human protein_coding chr19:6534797 chr19:6534800 nonsynonymous SNV 0.000 4 24 hm5C_associated_SNPs_103692 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr19:6534794-6534813
64251 chr8 120435207 120435207 1 + C A LUAD 120435203 + 120435183 120435223 41 CAGTGATGGCCGCTGCTGCACTCCCCACAATACCAAAACCA CAGTGATGGCCGCTGCTGCACTCCACACAATACCAAAACCA < 41bp 0.368469162287175 0.780921071294654 0.13166359 0.8776814 prediction 0.561842142589308 Functional Gain - NOV ENSG00000136999 CDS Human protein_coding chr8:120435203 chr8:120435207 synonymous SNV . 0 25 hm5C_associated_SNPs_103699 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:120435191-120435227
64251 chr1 28861871 28861871 1 + C G SKCM 28861870 + 28861850 28861890 41 GTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCT GTGCCTGAGTTATTTGCCAACGGTGGTGGCCGGCAAGGCCT < 41bp 0.470249892687986 0.780914844882288 0.57508683 0.8852869 prediction 0.561829689764575 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861870 chr1:28861871 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_103700 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28861858-28861882
64251 chr21 34602242 34602242 1 + C A rs188401375 34602238 + 34602218 34602258 41 GCGGCGGCGCGGCGCCCGCGCTTCCGTATCGCTCCTCGTAG GCGGCGGCGCGGCGCCCGCGCTTCAGTATCGCTCCTCGTAG < 41bp 0.580921675261139 0.861827217045553 0.40015915 0.41501293 prediction 0.561811083568828 Functional Gain - IFNAR2 ENSG00000159110 UTR5 Human protein_coding chr21:34602238 chr21:34602242 . . 0 25 hm5C_associated_SNPs_103702 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:34602240-34602260
64251 chr14 65208573 65208573 1 + C A SARC 65208569 + 65208549 65208589 41 GGGAGCAAGAGACAGGTGGGCTCCCGGCCGACTTCGTGGGC GGGAGCAAGAGACAGGTGGGCTCCAGGCCGACTTCGTGGGC < 41bp 0.36014804183937 0.780897125620906 0.6780292 0.85770375 prediction 0.561794251241813 Functional Gain - PLEKHG3 ENSG00000126822 CDS Human protein_coding chr14:65208569 chr14:65208573 synonymous SNV . 0 25 hm5C_associated_SNPs_103704 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:65208572-65208606
64251 chr2 219300110 219300110 1 + C A rs61733654 219300106 + 219300086 219300126 41 GGTGGAAGGGCAGGAGCCAGCCAACTTCTGGATGGCCCTGG GGTGGAAGGGCAGGAGCCAGCCAAATTCTGGATGGCCCTGG < 41bp 0.381601119330371 0.780832781794791 0.27320102 0.7230979 prediction 0.561665563589581 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219300106 chr2:219300110 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_103709 0 0 4 EFTUD2 POSTAR2 ENCODE chr2:219300103-219300164
64251 chr9 97847872 97847872 1 + C A rs377435234 97847868 + 97847848 97847888 41 CGCTGGGGCAGAGGCCGTTGCTGACGGGCCGGCCGCTGCTG CGCTGGGGCAGAGGCCGTTGCTGAAGGGCCGGCCGCTGCTG < 41bp 0.419711814673896 0.780802834886271 0.2198987 0.8194462 prediction 0.561605669772542 Functional Gain - C9orf3 ENSG00000148120 intronic Human protein_coding chr9:97847868 chr9:97847872 . . 0 25 hm5C_associated_SNPs_103713 0 0 7 DGCR8 POSTAR2 ENCODE chr9:97847856-97847889
64251 chr19 11558430 11558430 1 + C G LUSC 11558429 + 11558409 11558449 41 CGAGGTGCAGGGGGAGCAGCCCAAGGTCCGTGTTTGGGGGA CGAGGTGCAGGGGGAGCAGCCGAAGGTCCGTGTTTGGGGGA < 41bp 0.480312920985371 0.78079492256412 0.86380625 0.87077487 prediction 0.56158984512824 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11558429 chr19:11558430 synonymous SNV . 0 22 hm5C_associated_SNPs_103714 0 0 12 BUD13 POSTAR2 ENCODE chr19:11558414-11558433
64251 chr19 1046335 1046335 1 + C A LUAD 1046331 + 1046311 1046351 41 GTGGAGCGTGCAGCCGTCCGCGTGCTCAGCGGCGCCAACCC GTGGAGCGTGCAGCCGTCCGCGTGATCAGCGGCGCCAACCC < 41bp 0.400050705225787 0.780740307682846 0.8585334 0.9024912 prediction 0.561480615365693 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1046331 chr19:1046335 nonsynonymous SNV 0.354 1 25 hm5C_associated_SNPs_103717 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:1046303-1046346
64251 chr1 161736177 161736177 1 + C A HNSC 161736173 + 161736153 161736193 41 GGGGGAGCCGGCTGGGGTTGCCGGCACCATGGAGTCACCTT GGGGGAGCCGGCTGGGGTTGCCGGAACCATGGAGTCACCTT < 41bp 0.41768295560164 0.780729244383642 0.80017 0.89821947 prediction 0.561458488767283 Functional Gain - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161736173 chr1:161736177 synonymous SNV . 0 25 hm5C_associated_SNPs_103719 0 0 6 DDX3X POSTAR2 ENCODE chr1:161736147-161736195
64251 chr1 169076073 169076073 1 + C G BRCA 169076072 + 169076052 169076092 41 CTGACCCGCCATCGCCATGGCCCGCGGGAAAGCCAAGGAGG CTGACCCGCCATCGCCATGGCGCGCGGGAAAGCCAAGGAGG < 41bp 0.516594890771836 0.797306987032117 0.21766427 0.3161701 prediction 0.561424192520562 Functional Gain - ATP1B1 ENSG00000143153 CDS Human protein_coding chr1:169076072 chr1:169076073 synonymous SNV . 0 22 hm5C_associated_SNPs_103721 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:169076060-169076080
64251 chr4 99982392 99982392 1 + T G LUSC 99982390 + 99982370 99982410 41 GCTCAGTTTGAGCACACCCTCCTGGTCACAGACACTGGCTG GCTCAGTTTGAGCACACCCTCCGGGTCACAGACACTGGCTG < 41bp 0.45113300781586 0.780708104177716 0.06584358 0.6500029 prediction 0.561416208355432 Functional Gain - METAP1 ENSG00000164024 CDS Human protein_coding chr4:99982390 chr4:99982392 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_103722 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:99982375-99982435
64251 chr18 33263520 33263520 1 + T G COAD 33263517 + 33263497 33263537 41 GGATGCCCATTGTGAGTGTACAGTGGGATGGCTGGAGCCTC GGATGCCCATTGTGAGTGTACAGGGGGATGGCTGGAGCCTC < 41bp 0.61543197519929 0.896136833146453 0.22848862 0.91423774 prediction 0.561409715894326 Functional Gain - GALNT1 ENSG00000141429 CDS Human protein_coding chr18:33263517 chr18:33263520 nonsynonymous SNV 0.924 0 24 hm5C_associated_SNPs_103723 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:33263500-33263520
64251 chr9 117038033 117038033 1 + C A rs62640054 117038029 + 117038009 117038049 41 GGACGGGCCCCCCGGCCCCCCTGGCGTCACTGGTGTCCGGG GGACGGGCCCCCCGGCCCCCCTGGAGTCACTGGTGTCCGGG < 41bp 0.395175272943304 0.78069072573877 0.27726611 0.44665107 prediction 0.561381451477541 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117038029 chr9:117038033 synonymous SNV . 0 25 hm5C_associated_SNPs_103725 0 0 10 BUD13 POSTAR2 ENCODE chr9:117038030-117038048
64251 chr2 220112473 220112473 1 + T A UCS 220112469 + 220112449 220112489 41 CTGTGTCATCGATGAGCGGACTGATGTCTGGGTGAGGAGCA CTGTGTCATCGATGAGCGGACTGAAGTCTGGGTGAGGAGCA < 41bp 0.469845657896368 0.78063194671405 0.1267032 0.1724278 prediction 0.561263893428099 Functional Gain - STK16 ENSG00000115661 CDS Human protein_coding chr2:220112469 chr2:220112473 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_103731 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr2:220112445-220112474
64251 chr22 35813849 35813849 1 + T A UCEC 35813845 + 35813825 35813865 41 AGAAGTTTATTGCCTACTGCCGAGTGTGAGTCCTGGACGCA AGAAGTTTATTGCCTACTGCCGAGAGTGAGTCCTGGACGCA < 41bp 0.555789023274016 0.836404820493797 0.76890874 0.8885807 prediction 0.56123159443956 Functional Gain - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35813845 chr22:35813849 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_103735 0 0 8 DDX24 POSTAR2 ENCODE chr22:35813841-35813850
64251 chr6 109764953 109764953 1 + C A UCEC 109764949 + 109764929 109764969 41 GTGCTGTGGGCAGGTGCATTCTACCTCTTCCACGTACAGGA GTGCTGTGGGCAGGTGCATTCTACATCTTCCACGTACAGGA < 41bp 0.62438239547559 0.904983165437834 0.14825282 0.6153243 prediction 0.561201539924489 Functional Gain - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764949 chr6:109764953 nonsynonymous SNV 0.945 0 25 hm5C_associated_SNPs_103739 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:109764925-109764963
64251 chr19 1081559 1081559 1 + C A COAD 1081555 + 1081535 1081575 41 CTGGCCGCCCCCAGTGCTGCCTGGCCTGCCACAAGAAATGT CTGGCCGCCCCCAGTGCTGCCTGGACTGCCACAAGAAATGT < 41bp 0.3853995355707 0.780597360255424 0.058793724 0.07533324 prediction 0.561194720510848 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1081555 chr19:1081559 nonsynonymous SNV 0.993 5 25 hm5C_associated_SNPs_103741 0 0 3 BUD13 POSTAR2 ENCODE chr19:1081547-1081604
64251 chr16 678264 678264 1 + C G rs11548189 678260 + 678240 678280 41 AGGGGAGAAAGGAGGTGCACCTGGCAGCCCACATTTTTGTT AGGGGAGAAAGGAGGTGCACCTGGGAGCCCACATTTTTGTT < 41bp 0.506652172063847 0.787224306606104 0.426783 0.67292976 prediction 0.561144269084515 Functional Gain - RAB40C ENSG00000197562 UTR3 Human protein_coding chr16:678260 chr16:678264 . . 0 25 hm5C_associated_SNPs_103744 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:678260-678280
64251 chr12 12588662 12588662 1 + T C STAD 12588660 + 12588640 12588680 41 TCCGATATCAAGATCACCTGCATCAGTGTGCAGAGGCCGTT TCCGATATCAAGATCACCTGCACCAGTGTGCAGAGGCCGTT < 41bp 0.509627658417929 0.790192408145952 0.076601356 0.07176587 prediction 0.561129499456046 Functional Gain - BORCS5 ENSG00000165714 CDS Human protein_coding chr12:12588660 chr12:12588662 synonymous SNV . 0 23 hm5C_associated_SNPs_103745 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:12588643-12588665
64251 chr9 80921376 80921376 1 + C A SKCM 80921372 + 80921352 80921392 41 GTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGTGGA GTTTGTGACATGTCCTCAAACTTCATGTCCAAGCCAGTGGA < 41bp 0.35069057577371 0.78051600451102 0.028300405 0.05632183 prediction 0.56103200902204 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80921372 chr9:80921376 nonsynonymous SNV 0.952 3 25 hm5C_associated_SNPs_103750 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr9:80921368-80921402
64251 chr12 69145967 69145967 1 + T A UCEC 69145963 + 69145943 69145983 41 ATTTGGTCCCTGGTCAGTTTCTGCTTTGGTAAGTTCTAATT ATTTGGTCCCTGGTCAGTTTCTGCATTGGTAAGTTCTAATT < 41bp 0.575258784668499 0.855750122931559 0.06798428 0.2337228 prediction 0.560982676526121 Functional Gain - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69145963 chr12:69145967 synonymous SNV . 0 25 hm5C_associated_SNPs_103753 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69145944-69145977
64251 chr1 57340647 57340647 1 + C G ESCA 57340643 + 57340623 57340663 41 ACCGACACCGGAGCCTCTTGCAGCCAAACAAGTTTGGGGGA ACCGACACCGGAGCCTCTTGCAGCGAAACAAGTTTGGGGGA < 41bp 0.496464477355958 0.780487982972838 0.88660777 0.8948544 prediction 0.560975965945677 Functional Gain - C8A ENSG00000157131 CDS Human protein_coding chr1:57340643 chr1:57340647 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_103754 0 0 2 SND1 POSTAR2 ENCODE chr1:57340621-57340714
64251 chr13 111806285 111806285 1 + C G rs139490439 111806284 + 111806264 111806304 41 CCCCGGAGCGAGAGCGAGTGCCTGAGCAACATCCGCGAGTT CCCCGGAGCGAGAGCGAGTGCGTGAGCAACATCCGCGAGTT < 41bp 0.493698815456019 0.780447565175641 0.6311648 0.7494279 prediction 0.560895130351282 Functional Gain - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111806284 chr13:111806285 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_103757 0 0 5 DDX3X POSTAR2 ENCODE chr13:111806251-111806286
64251 chr3 183882129 183882129 1 + T A rs142016012 183882125 + 183882105 183882145 41 TAACCCATCGGAGCTGCCACCACCTATGGAGCGCACGGGAG TAACCCATCGGAGCTGCCACCACCAATGGAGCGCACGGGAG < 41bp 0.449524788590964 0.780438356871035 0.34089974 0.5704305 prediction 0.56087671374207 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183882125 chr3:183882129 synonymous SNV . 0 25 hm5C_associated_SNPs_103758 0 0 9 DDX24 POSTAR2 ENCODE chr3:183882114-183882171
64251 chrX 117883649 117883649 1 + T G SARC 117883647 + 117883627 117883667 41 CTGAGTCTGCTGTGACTGAGCTTCAATGCATTTGGCACAAC CTGAGTCTGCTGTGACTGAGCTGCAATGCATTTGGCACAAC < 41bp 0.570218833636638 0.850652344492791 0.07562697 0.13714752 prediction 0.560867021712306 Functional Gain - IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117883647 chrX:117883649 synonymous SNV . 0 23 hm5C_associated_SNPs_103760 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:117883618-117883650
64251 chr5 180258113 180258113 1 + C A rs1872182 180258109 + 180258089 180258129 41 GGCTTTGGGCTGTGGAAACGCTGCCTCTGTGGAAGTCTCTC GGCTTTGGGCTGTGGAAACGCTGCATCTGTGGAAGTCTCTC < 41bp 0.416880537756117 0.780413560867234 0.29269758 0.35457456 prediction 0.560827121734469 Functional Gain - HEIH;LINC00847 ENSG00000245060 ncRNA_exonic Human lincRNA chr5:180258109 chr5:180258113 . . 0 25 hm5C_associated_SNPs_103762 0 0 1 DDX3X POSTAR2 ENCODE chr5:180258057-180258138
64251 chr7 92078110 92078110 1 + T G UCEC 92078107 + 92078087 92078127 41 AGGTCTGCTCGGCTCAGAAACACTAAATACAAATCTGCTCC AGGTCTGCTCGGCTCAGAAACACGAAATACAAATCTGCTCC < 41bp 0.617331147723667 0.897726618995065 0.24464396 0.43249533 prediction 0.560790942542797 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92078107 chr7:92078110 synonymous SNV . 0 24 hm5C_associated_SNPs_103765 0 0 10 SRSF1 POSTAR2 GSE83923,GSM2221666 chr7:92078100-92078120
64251 chr11 19170823 19170823 1 + T A LIHC 19170819 + 19170799 19170839 41 GAGAGGGATTCAGCAGCATCCACCTGGCAGTATTGTTTCAA GAGAGGGATTCAGCAGCATCCACCAGGCAGTATTGTTTCAA < 41bp 0.575351634087222 0.855677134675177 0.08205652 0.10424349 prediction 0.56065100117591 Functional Gain - ZDHHC13 ENSG00000177054 CDS Human protein_coding chr11:19170819 chr11:19170823 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_103772 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:19170795-19170828
64251 chr10 18828215 18828215 1 - A T BRCA 18828219 - 18828199 18828239 41 TTCCACACTAGGTTCTTCTTCAGCTTGGGAAGCAGAACGGA TTCCACACTAGGTTCTTCTTCAGCATGGGAAGCAGAACGGA < 41bp 0.474716431736377 0.780295507709866 0.4147226 0.2960289 prediction 0.560591015419732 Functional Gain - CACNB2 ENSG00000165995 CDS Human protein_coding chr10:18828219 chr10:18828215 nonsynonymous SNV 0.976 2 25 hm5C_associated_SNPs_103774 0 0 1 PPIG POSTAR2 ENCODE chr10:18828130-18828223
64251 chr20 49196284 49196284 1 + C A rs2230604 49196280 + 49196260 49196300 41 CCACGAGGACCTGGAGCCCCCACCCGAGCATATCCCCCCAC CCACGAGGACCTGGAGCCCCCACCAGAGCATATCCCCCCAC < 41bp 0.641006825654699 0.921232558184105 0.11233395 0.20895472 prediction 0.560451465058812 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49196280 chr20:49196284 synonymous SNV . 0 25 hm5C_associated_SNPs_103776 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:49196254-49196288
64251 chr16 67209221 67209221 1 + C A rs75280012 67209217 + 67209197 67209237 41 ATCCAGTCCTCAGCCCTAATCTGCCCTTAGGAGTCCAGGCT ATCCAGTCCTCAGCCCTAATCTGCACTTAGGAGTCCAGGCT < 41bp 0.40655975704485 0.780162189175248 0.3005141 0.30796355 prediction 0.560324378350497 Functional Gain - NOL3 ENSG00000140939 UTR3 Human protein_coding chr16:67209217 chr16:67209221 . . 0 25 hm5C_associated_SNPs_103783 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67209196-67209223
64251 chrX 40450585 40450585 1 + C G rs9014 40450584 + 40450564 40450604 41 GTGAACAAACTGGCTCTACCCCCAGGCAGTGTCATTTCGTA GTGAACAAACTGGCTCTACCCGCAGGCAGTGTCATTTCGTA < 41bp 0.510456176507021 0.790584073924963 0.27540165 0.6525952 prediction 0.560255794835884 Functional Gain - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40450584 chrX:40450585 nonsynonymous SNV 0.910 0 22 hm5C_associated_SNPs_103789 1 0 9 TARDBP POSTAR2 DRA001158,DRS012385 chrX:40450545-40450614
64251 chr5 150632814 150632814 1 + C A COAD 150632810 + 150632790 150632830 41 ATGCAGGCTCCCCTCCTGATCGCCCTGGGCTTGCTTCTCGC ATGCAGGCTCCCCTCCTGATCGCCATGGGCTTGCTTCTCGC < 41bp 0.623820233839963 0.903933190514206 0.14435732 0.8629136 prediction 0.560225913348486 Functional Gain - GM2A ENSG00000196743 CDS Human protein_coding chr5:150632810 chr5:150632814 nonsynonymous SNV 0.005 2 25 hm5C_associated_SNPs_103790 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr5:150632796-150632822
64251 chr7 1131451 1131451 1 + C G rs199734759 1131450 + 1131430 1131470 41 GGCCCCCAACACCACCTCCCCCGAGCTCAACCTGTCCCACC GGCCCCCAACACCACCTCCCCGGAGCTCAACCTGTCCCACC < 41bp 0.54105535762956 0.821143952983109 0.022093713 0.30657506 prediction 0.5601771907071 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131450 chr7:1131451 synonymous SNV . 0 22 hm5C_associated_SNPs_103793 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1131424-1131471
64251 chr15 22833544 22833544 1 + C G SKCM 22833543 + 22833523 22833563 41 ACATGGCGCGGCACGGGCCACCGTGGAGTCGGTTGGACGCG ACATGGCGCGGCACGGGCCACGGTGGAGTCGGTTGGACGCG < 41bp 0.529626092124667 0.809696669173513 0.40940365 0.7526813 prediction 0.560141154097691 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22833543 chr15:22833544 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_103795 0 0 2 DDX3X POSTAR2 ENCODE chr15:22833544-22833662
64251 chr1 27662234 27662234 1 + C G rs190981142 27662233 + 27662213 27662253 41 TGTTGAAAGGCTTTGGCTTCCCGCTGTAGAGCTGCTCCCGC TGTTGAAAGGCTTTGGCTTCCGGCTGTAGAGCTGCTCCCGC < 41bp 0.514755849038504 0.79481185697732 0.40639454 0.9044517 prediction 0.560112015877633 Functional Gain - TMEM222 ENSG00000186501 UTR3 Human protein_coding chr1:27662233 chr1:27662234 . . 0 22 hm5C_associated_SNPs_103797 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:27662217-27662254
64251 chr19 10226051 10226051 1 + C A rs371268998 10226047 + 10226027 10226067 41 AAGGACTGTCCCCTCAAAACCAGCCGGGGGACTGTTAAATT AAGGACTGTCCCCTCAAAACCAGCAGGGGGACTGTTAAATT < 41bp 0.539054479067939 0.819075334063768 0.37886 0.5296289 prediction 0.560041709991657 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130811 intronic Human protein_coding chr19:10226047 chr19:10226051 . . 0 25 hm5C_associated_SNPs_103801 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10226041-10226077
64251 chr12 16050876 16050876 1 + T G UCEC 16050874 + 16050854 16050894 41 TCAATTCTGCATCTCTTCATCCTGAGAAAGAATTTCTTGTT TCAATTCTGCATCTCTTCATCCGGAGAAAGAATTTCTTGTT < 41bp 0.469373698762725 0.780008930980618 0.18409577 0.9203881 prediction 0.560017861961237 Functional Gain - STRAP ENSG00000023734 CDS Human protein_coding chr12:16050874 chr12:16050876 synonymous SNV . 0 23 hm5C_associated_SNPs_103803 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:16050860-16050880
64251 chr19 35760495 35760495 1 + C G LUAD 35760494 + 35760474 35760514 41 TCGGCCCCAGGCGGGGACGGCCCAGGAGCGGAGGAGCAGAC TCGGCCCCAGGCGGGGACGGCGCAGGAGCGGAGGAGCAGAC < 41bp 0.542088982678132 0.821962350442337 0.54937685 0.90011626 prediction 0.55974673552841 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35760494 chr19:35760495 nonsynonymous SNV 0.957 1 22 hm5C_associated_SNPs_103819 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:35760480-35760500
64251 chr15 102515245 102515245 1 + C G rs548605852 102515244 + 102515224 102515264 41 GCTCCCAGGGAAGTGGTTGACCCCTCCGGTGGCCGGGCCAC GCTCCCAGGGAAGTGGTTGACGCCTCCGGTGGCCGGGCCAC < 41bp 0.503871377978211 0.783665016774619 0.15509889 0.32535926 prediction 0.559587277592815 Functional Gain - WASH3P ENSG00000185596 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:102515244 chr15:102515245 . . 0 22 hm5C_associated_SNPs_103822 0 0 1 PRPF8 POSTAR2 ENCODE chr15:102515185-102515264
64251 chr12 53800463 53800463 1 + T A LUSC 53800459 + 53800439 53800479 41 AGAGGAAGGAGAAAACAGCCCAGATGCCCAACCCCAAGCCG AGAGGAAGGAGAAAACAGCCCAGAAGCCCAACCCCAAGCCG < 41bp 0.465238712976177 0.779758842319156 0.5940587 0.5350113 prediction 0.559517684638311 Functional Gain - SP1 ENSG00000185591 CDS Human protein_coding chr12:53800459 chr12:53800463 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_103826 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:53800461-53800479
64251 chr1 41482901 41482901 1 + C G rs141445707 41482900 + 41482880 41482920 41 CCACCCACTGGCCTCAGCTTCCGTACCTGCCTGCACCACTC CCACCCACTGGCCTCAGCTTCGGTACCTGCCTGCACCACTC < 41bp 0.490813619893708 0.779753375415129 0.25643915 0.8288519 prediction 0.559506750830257 Functional Gain - SLFNL1-AS1 ENSG00000171790 intronic Human protein_coding chr1:41482900 chr1:41482901 . . 0 22 hm5C_associated_SNPs_103827 0 0 6 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:41482880-41482901
64251 chr17 41181174 41181174 1 + C G rs150946719 41181173 + 41181153 41181193 41 AGCAAGGAGAAGCCCTTGCCCCCCATCAGTCCACCAGCCCT AGCAAGGAGAAGCCCTTGCCCGCCATCAGTCCACCAGCCCT < 41bp 0.541476687299683 0.821193701418446 0.016306609 0.065659285 prediction 0.559434028237528 Functional Gain - RND2 ENSG00000108830 UTR3 Human protein_coding chr17:41181173 chr17:41181174 . . 0 22 hm5C_associated_SNPs_103831 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:41181164-41181195
64251 chr17 7579315 7579315 1 - G T BRCA 7579319 - 7579299 7579339 41 TGGGACAGCCAAGTCTGTGACTTGCACGGTCAGTTGCCCTG TGGGACAGCCAAGTCTGTGACTTGAACGGTCAGTTGCCCTG < 41bp 0.404475682532742 0.779679922739631 0.1779784 0.24482447 prediction 0.559359845479262 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7579319 chr17:7579315 stopgain 0.953 1 25 hm5C_associated_SNPs_103836 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:7579300-7579320
64251 chr16 14755821 14755821 1 + C A STAD 14755817 + 14755797 14755837 41 TCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACTA TCCCCCAGGCTGAGTCTGCTCTACATGTACCTGTTTGACTA < 41bp 0.642863320062536 0.922523056993654 0.05938545 0.61397475 prediction 0.559319473862237 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755817 chr16:14755821 nonsynonymous SNV 0.959 3 25 hm5C_associated_SNPs_103838 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr16:14755810-14755831
64251 chr1 233802464 233802464 1 + T A UCEC 233802460 + 233802440 233802480 41 TGGTCCAGCGCATCACCGTGCACGTCACCCGCAGGCCGGTC TGGTCCAGCGCATCACCGTGCACGACACCCGCAGGCCGGTC < 41bp 0.557036077178068 0.836657935192765 0.13843107 0.120521456 prediction 0.559243716029394 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802460 chr1:233802464 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_103841 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:233802459-233802518
64251 chr11 75277757 75277757 1 + C G rs650241 75277756 + 75277736 75277776 41 GCTGCGCTCACTCAGCAACTCCACGGCGCGCAACGTGACCT GCTGCGCTCACTCAGCAACTCGACGGCGCGCAACGTGACCT < 41bp 0.470539500909466 0.779556356381093 0.18663886 0.32287169 prediction 0.559112712762186 Functional Gain - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75277756 chr11:75277757 synonymous SNV . 0 22 hm5C_associated_SNPs_103845 2 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:75277741-75277760
64251 chr10 76970648 76970648 1 + T G rs556059717 76970646 + 76970626 76970666 41 ACCGCGAGCGTGCCAAGCGGCTTCAGCAGCTAGCGGAGCGG ACCGCGAGCGTGCCAAGCGGCTGCAGCAGCTAGCGGAGCGG < 41bp 0.503466156564341 0.783015004083105 0.16894391 0.494745 prediction 0.559097695037528 Functional Gain - VDAC2 ENSG00000165637 UTR5 Human protein_coding chr10:76970646 chr10:76970648 . . 0 23 hm5C_associated_SNPs_103846 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:76970577-76970696
64251 chr2 113404469 113404469 1 + C A UCEC 113404465 + 113404445 113404485 41 GCTTCTGGTCCTTTGGTGGACTACCTATGGATGCTCATCCT GCTTCTGGTCCTTTGGTGGACTACATATGGATGCTCATCCT < 41bp 0.362988181464552 0.779500230176879 0.121067375 0.7293565 prediction 0.559000460353757 Functional Gain - SLC20A1 ENSG00000144136 CDS Human protein_coding chr2:113404465 chr2:113404469 nonsynonymous SNV 0.223 2 25 hm5C_associated_SNPs_103850 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:113404447-113404470
64251 chr4 17600138 17600138 1 + C A OV 17600134 + 17600114 17600154 41 GGCTGATGCGCTCTGTTACGCACACACGTTTAACCCGAAGG GGCTGATGCGCTCTGTTACGCACAAACGTTTAACCCGAAGG < 41bp 0.368018928152792 0.779473357434069 0.09679735 0.11753321 prediction 0.558946714868137 Functional Gain - LAP3 ENSG00000002549 CDS Human protein_coding chr4:17600134 chr4:17600138 nonsynonymous SNV 0.880 1 25 hm5C_associated_SNPs_103851 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:17600108-17600172
64251 chr12 13066220 13066220 1 + T A rs1061047 13066216 + 13066196 13066236 41 TCATCTCTCTAGTGCTGCCTCACATTGGGCCTCAGCAGCTC TCATCTCTCTAGTGCTGCCTCACAATGGGCCTCAGCAGCTC < 41bp 0.509380537812539 0.788834397176501 0.010307014 0.023791283 prediction 0.558907718727924 Functional Gain - GPRC5A ENSG00000013588 UTR3 Human protein_coding chr12:13066216 chr12:13066220 . . 0 25 hm5C_associated_SNPs_103853 0 0 7 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:13066180-13066220
64251 chr19 47422158 47422158 1 + T A UCEC 47422154 + 47422134 47422174 41 GTCAATAATGACCACTTTCTCTACTGGGGAGAAGTTAGCCG GTCAATAATGACCACTTTCTCTACAGGGGAGAAGTTAGCCG < 41bp 0.466695240865282 0.779452583915967 0.29161185 0.876775 prediction 0.558905167831934 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47422154 chr19:47422158 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_103854 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:47422079-47422158
64251 chr7 150020625 150020625 1 - G T rs534922901 150020629 - 150020609 150020649 41 CTGAGGGGTGGAGCCGGCAGCCTGCGGAGCCACTGGCCAAG CTGAGGGGTGGAGCCGGCAGCCTGAGGAGCCACTGGCCAAG < 41bp 0.464450804276702 0.779445001121449 0.8791398 0.89033467 prediction 0.558890002242897 Functional Gain - ACTR3C;LRRC61 ENSG00000106526 CDS Human protein_coding chr7:150020629 chr7:150020625 nonsynonymous SNV 0.073 2 25 hm5C_associated_SNPs_103855 0 0 1 DDX3X POSTAR2 ENCODE chr7:150020557-150020637
64251 chr1 111441894 111441894 1 + T G rs151105416 111441892 + 111441872 111441912 41 ATTTATAGCATGAAGCCCTACATGATCACTGCAGGATGATC ATTTATAGCATGAAGCCCTACAGGATCACTGCAGGATGATC < 41bp 0.464451788932714 0.779442834008897 0.039186805 0.14950088 prediction 0.558885668017794 Functional Gain - CD53 ENSG00000143119 UTR3 Human protein_coding chr1:111441892 chr1:111441894 . . 0 23 hm5C_associated_SNPs_103856 0 0 1 RBM15 POSTAR2 ENCODE chr1:111441839-111441895
64251 chr19 1106615 1106615 1 + T A rs713041 1106611 + 1106591 1106631 41 CGCCCGAGCCCCTGCCCACGCCCTTGGAGCCTTCCACCGGC CGCCCGAGCCCCTGCCCACGCCCTAGGAGCCTTCCACCGGC < 41bp 0.476321083568727 0.77937685629884 0.1228064 0.12528896 prediction 0.558753712597681 Functional Gain - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1106611 chr19:1106615 stopgain . 0 25 hm5C_associated_SNPs_103859 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1106541-1106633
64251 chr15 78833166 78833166 1 + C A rs561451459 78833162 + 78833142 78833182 41 CCGAGAGTTGGGGTGGCTTCCGTCCTCAGGAGTTCGGTACG CCGAGAGTTGGGGTGGCTTCCGTCATCAGGAGTTCGGTACG < 41bp 0.439098193161024 0.779336113245034 0.33251143 0.21198031 prediction 0.558672226490069 Functional Gain - PSMA4 ENSG00000041357 UTR5 Human protein_coding chr15:78833162 chr15:78833166 . . 0 25 hm5C_associated_SNPs_103864 0 0 8 PTBP1 POSTAR2 GSE57278,GSM1486177 chr15:78833140-78833200
64251 chr9 136305517 136305517 1 + T G CHOL 136305514 + 136305494 136305534 41 GCTGGGAAGATGAGCATCTCCCCTAACACCACCTACCCCTC GCTGGGAAGATGAGCATCTCCCCGAACACCACCTACCCCTC < 41bp 0.41141234809008 0.779261119002414 0.10590166 0.3038178 prediction 0.558522238004827 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136305514 chr9:136305517 synonymous SNV . 0 24 hm5C_associated_SNPs_103871 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:136305507-136305541
64251 chr19 17452053 17452053 1 + C G rs149578279 17452052 + 17452032 17452072 41 GTCCCGGTCCTGACCTGCCCCCGCACCTGCTGCTGTCCTGT GTCCCGGTCCTGACCTGCCCCGGCACCTGCTGCTGTCCTGT < 41bp 0.481852537027981 0.779170658747326 0.27309453 0.7205581 prediction 0.558341317494653 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452052 chr19:17452053 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_103875 0 0 2 DDX6 POSTAR2 ENCODE chr19:17452009-17452060
64251 chr1 203274801 203274801 1 + C A PAAD 203274797 + 203274777 203274817 41 GCCGCCGTGGGCTTCCTCTCCAGCCTCCTGAGGACCCGGGG GCCGCCGTGGGCTTCCTCTCCAGCATCCTGAGGACCCGGGG < 41bp 0.625833849821886 0.905003588756997 0.53911585 0.1756489 prediction 0.558339477870222 Functional Gain - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203274797 chr1:203274801 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_103876 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:203274799-203274833
64251 chr17 38249328 38249328 1 + C A HNSC 38249324 + 38249304 38249344 41 AGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGC AGGGGGCAGCGGCAGAAGGCCGGCAGGGCGGGTCACTGGGC < 41bp 0.62829409384222 0.90745983382404 0.84754324 0.7601396 prediction 0.558331479963641 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38249324 chr17:38249328 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_103879 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:38249320-38249340
64251 chr6 167708143 167708143 1 + T A LUSC 167708139 + 167708119 167708159 41 AAGGGGACCATCATCCTCTCCATGTGTGGCTACGTGGCCTT AAGGGGACCATCATCCTCTCCATGAGTGGCTACGTGGCCTT < 41bp 0.556237373257375 0.835379427340239 0.26225966 0.21829206 prediction 0.558284108165729 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167708139 chr6:167708143 nonsynonymous SNV 0.985 1 25 hm5C_associated_SNPs_103884 0 0 1 NOL12 POSTAR2 ENCODE chr6:167708135-167708185
64251 chr22 20196046 20196046 1 + C A rs17746115 20196042 + 20196022 20196062 41 CTGATGGATTAAAGTGGAACCAAGCGAATTGATTTTTCTCC CTGATGGATTAAAGTGGAACCAAGAGAATTGATTTTTCTCC < 41bp 0.505758966656857 0.784864844396043 0.46997237 0.5490948 prediction 0.558211755478372 Functional Gain - LINC00896 ENSG00000236499 ncRNA_exonic Human lincRNA chr22:20196042 chr22:20196046 . . 0 25 hm5C_associated_SNPs_103887 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr22:20196023-20196073
64251 chr12 12510111 12510111 1 + C A rs184467411 12510107 + 12510087 12510127 41 TGCGGCAAAGCCAGTGTCATCTGCCGGTTCTCTTAGGGCTC TGCGGCAAAGCCAGTGTCATCTGCAGGTTCTCTTAGGGCTC < 41bp 0.597210325890027 0.876253255045406 0.36285114 0.4704766 prediction 0.558085858310758 Functional Gain - BORCS5 ENSG00000165714 UTR5 Human protein_coding chr12:12510107 chr12:12510111 . . 0 25 hm5C_associated_SNPs_103893 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr12:12510102-12510130
64251 chr19 47856690 47856690 1 + C G BLCA 47856686 + 47856666 47856706 41 GCGGAGAGAGTGGCTGAGTTCCGCCGAGCCCTGTTGCACTA GCGGAGAGAGTGGCTGAGTTCCGCGGAGCCCTGTTGCACTA < 41bp 0.509927594999348 0.788954344284597 0.31650847 0.50219643 prediction 0.558053498570498 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856686 chr19:47856690 nonsynonymous SNV 0.670 0 25 hm5C_associated_SNPs_103894 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:47856660-47856692
64251 chr19 34710310 34710310 1 + T C UCEC 34710308 + 34710288 34710328 41 TATCATAGCTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGC TATCATAGCTCCAGGTGCTCCTCCAGCTCCAAGGAGAGGGC < 41bp 0.536569273330268 0.815576752349665 0.067208916 0.9316491 prediction 0.558014958038793 Functional Gain - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34710308 chr19:34710310 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_103898 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:34710295-34710317
64251 chr19 48953672 48953672 1 + C G LGG 48953671 + 48953651 48953691 41 CTGCAGGTGGTGGAGGAGCCCCAGGCCCTGGCAGCCTTCCT CTGCAGGTGGTGGAGGAGCCCGAGGCCCTGGCAGCCTTCCT < 41bp 0.469627351556616 0.778949785484662 0.90730995 0.91989064 prediction 0.557899570969324 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48953671 chr19:48953672 nonsynonymous SNV 0.901 0 22 hm5C_associated_SNPs_103903 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:48953671-48953672
64251 chr14 94640813 94640813 1 + C G rs114546840 94640812 + 94640792 94640832 41 CCCGGCGGTCCATGCATCCGCCGCCGCCCGCCGCCGCGATG CCCGGCGGTCCATGCATCCGCGGCCGCCCGCCGCCGCGATG < 41bp 0.491375504967411 0.778905992113491 0.19669104 0.4416225 prediction 0.557811984226982 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94640812 chr14:94640813 nonsynonymous SNV 0.611 0 22 hm5C_associated_SNPs_103907 0 0 1 DDX3X POSTAR2 ENCODE chr14:94640711-94640833
64251 chr7 75517479 75517479 1 + C A UCEC 75517475 + 75517455 75517495 41 CCTCCGTACCAGCCTGCCTCCGGCCTGTGCTATGTGCAGAA CCTCCGTACCAGCCTGCCTCCGGCATGTGCTATGTGCAGAA < 41bp 0.628785280971304 0.907684477922792 0.23306647 0.3412705 prediction 0.557798393902976 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517475 chr7:75517479 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_103909 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:75517442-75517480
64251 chr1 55207175 55207175 1 + C G GBM 55207174 + 55207154 55207194 41 CTCCGGGGGAGAAAGGTGTACCAGATACGATGACTAAGCCA CTCCGGGGGAGAAAGGTGTACGAGATACGATGACTAAGCCA < 41bp 0.52902613463647 0.807862247402173 0.33805925 0.6429627 prediction 0.557672225531406 Functional Gain - TTC4 ENSG00000243725 CDS Human protein_coding chr1:55207174 chr1:55207175 nonsynonymous SNV 0.969 1 22 hm5C_associated_SNPs_103914 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:55207173-55207200
64251 chr16 3108229 3108229 1 + C A rs59807543 3108225 + 3108205 3108245 41 CCCTCCGGACAGCTGGTGTCCCCGCGACCCGCACGGCTGCA CCCTCCGGACAGCTGGTGTCCCCGAGACCCGCACGGCTGCA < 41bp 0.378223719734869 0.778804786894173 0.8028996 0.73956454 prediction 0.557609573788346 Functional Gain - MMP25 ENSG00000008516 CDS Human protein_coding chr16:3108225 chr16:3108229 synonymous SNV . 0 25 hm5C_associated_SNPs_103921 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:3108214-3108244
64251 chr20 34487475 34487475 1 + C G rs553915565 34487474 + 34487454 34487494 41 CACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCAA CACTGGAGCCAGAAGAGAGCCGGGGAAAGAGGCATGTCCAA < 41bp 0.531917496325819 0.810677321196161 0.5523232 0.9292669 prediction 0.557519649740684 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34487474 chr20:34487475 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_103923 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr20:34487444-34487475
64251 chr5 78915478 78915478 1 + C G LUAD 78915477 + 78915457 78915497 41 CCAGTGAACAAGAGCATGTTCCCAAACTCAATTTTGGGTCG CCAGTGAACAAGAGCATGTTCGCAAACTCAATTTTGGGTCG < 41bp 0.521275522289198 0.800016041352172 0.06624183 0.18781304 prediction 0.557481038125948 Functional Gain - PAPD4 ENSG00000164329 CDS Human protein_coding chr5:78915477 chr5:78915478 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_103925 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:78915457-78915486
64251 chrX 54578063 54578063 1 + C G BLCA 54578062 + 54578042 54578082 41 TGGATGCTCCAGGCATTGTCCCAGGGCCCAACTCAGAGGTG TGGATGCTCCAGGCATTGTCCGAGGGCCCAACTCAGAGGTG < 41bp 0.468220938130681 0.778698569884037 0.8915317 0.92635065 prediction 0.557397139768075 Functional Gain - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578062 chrX:54578063 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_103930 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:54578041-54578073
64251 chr9 34343337 34343337 1 + C A rs143347739 34343333 + 34343313 34343353 41 CTCTCCCATGAGCACCAAGCCTACCGCTGGCTGGGGCTGGA CTCTCCCATGAGCACCAAGCCTACAGCTGGCTGGGGCTGGA < 41bp 0.640413985105215 0.919110198162429 0.211418 0.2235052 prediction 0.557392426114429 Functional Gain - NUDT2 ENSG00000164978 CDS Human protein_coding chr9:34343333 chr9:34343337 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_103931 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:34343324-34343352
64251 chr4 71068595 71068595 1 + T A STAD 71068591 + 71068571 71068611 41 CACAACCAATGTTTTCACTTCTGCTGTAGACCAAACTATTA CACAACCAATGTTTTCACTTCTGCAGTAGACCAAACTATTA < 41bp 0.457075083713921 0.778680785467444 0.0781503 0.13307175 prediction 0.557361570934889 Functional Gain - ODAM ENSG00000109205 CDS Human protein_coding chr4:71068591 chr4:71068595 synonymous SNV . 0 25 hm5C_associated_SNPs_103933 0 0 1 IGF2BP1 POSTAR2 ENCODE chr4:71068556-71068597
64251 chr1 173735378 173735378 1 + T C rs7536773 173735376 + 173735356 173735396 41 TAGCAGTACTTGGAGGCTTTCTTTATGCTGTGGGTGGCCAG TAGCAGTACTTGGAGGCTTTCTCTATGCTGTGGGTGGCCAG < 41bp 0.47863244118069 0.778626801375031 0.14735919 0.92791957 prediction 0.557253602750063 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173735376 chr1:173735378 synonymous SNV . 0 23 hm5C_associated_SNPs_103941 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:173735338-173735391
64251 chr1 1420466 1420466 1 + T A COAD 1420462 + 1420442 1420482 41 ATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTG ATGCGACAGCCGTCACTGGCCGCTACATCGAGGCTCGGCTG < 41bp 0.461980605683744 0.778602202652996 0.01788041 0.10414782 prediction 0.557204405305992 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1420462 chr1:1420466 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_103943 0 0 5 BUD13 POSTAR2 ENCODE chr1:1420394-1420493
64251 chr9 35733461 35733461 1 + T G UCEC 35733459 + 35733439 35733479 41 AGAAGGAGGGGCTTATTCTGCCTGAGACACTTCCTCTCACT AGAAGGAGGGGCTTATTCTGCCGGAGACACTTCCTCTCACT < 41bp 0.440896610616481 0.778599774113998 0.3379901 0.8898256 prediction 0.557199548227997 Functional Gain - CREB3 ENSG00000107175 CDS Human protein_coding chr9:35733459 chr9:35733461 synonymous SNV . 0 23 hm5C_associated_SNPs_103944 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:35733430-35733462
64251 chr2 97217964 97217964 1 + C A KIRC 97217960 + 97217940 97217980 41 TTCGACAGTGCCCTCCGCCACAGACTTTGCCCGGCCTCATC TTCGACAGTGCCCTCCGCCACAGAATTTGCCCGGCCTCATC < 41bp 0.39652865727403 0.778575907879759 0.43348357 0.44330397 prediction 0.557151815759518 Functional Gain - ARID5A ENSG00000196843 CDS Human protein_coding chr2:97217960 chr2:97217964 nonsynonymous SNV 0.873 2 25 hm5C_associated_SNPs_103946 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:97217956-97217968
64251 chr8 9605665 9605665 1 + T A LUAD 9605661 + 9605641 9605681 41 GCTGTGCGCCCTCCTCCTAGCGCATGGTGCAGACCCCACCA GCTGTGCGCCCTCCTCCTAGCGCAAGGTGCAGACCCCACCA < 41bp 0.566392740153349 0.844962031899553 0.81657326 0.9122611 prediction 0.557138583492408 Functional Gain - TNKS ENSG00000173273 CDS Human protein_coding chr8:9605661 chr8:9605665 nonsynonymous SNV 0.814 3 25 hm5C_associated_SNPs_103948 0 0 6 FMR1 POSTAR2 ENCODE chr8:9605592-9605723
64251 chr16 69373979 69373979 1 + C A GBM 69373975 + 69373955 69373995 41 TACTGTTTCCGTCTGCACAACGACCGGGTGTACTATGTGAG TACTGTTTCCGTCTGCACAACGACAGGGTGTACTATGTGAG < 41bp 0.374516427325966 0.778501836953121 0.047451317 0.066135764 prediction 0.557003673906242 Functional Gain - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69373975 chr16:69373979 synonymous SNV . 0 25 hm5C_associated_SNPs_103957 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr16:69373959-69373987
64251 chr4 79793787 79793787 1 + C A UCEC 79793783 + 79793763 79793803 41 TTCAGATGCCGCAGTATCAGCAGGCTTTCTTTCAACAGCAG TTCAGATGCCGCAGTATCAGCAGGATTTCTTTCAACAGCAG < 41bp 0.383484133954571 0.778482245238206 0.8260691 0.81349653 prediction 0.556964490476412 Functional Gain - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79793783 chr4:79793787 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_103959 0 0 3 IGF2BP1 POSTAR2 ENCODE chr4:79793780-79793867
64251 chr10 114925710 114925710 1 + C A THCA 114925706 + 114925686 114925726 41 GACCCAGCCCCAGCCGCTGTCGCTCGTCACCAAGTCTTTAG GACCCAGCCCCAGCCGCTGTCGCTAGTCACCAAGTCTTTAG < 41bp 0.435842677065016 0.778475395743348 0.123894244 0.17409557 prediction 0.556950791486696 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925706 chr10:114925710 synonymous SNV . 0 25 hm5C_associated_SNPs_103960 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:114925671-114925716
64251 chr19 46185005 46185005 1 + C G HNSC 46185004 + 46184984 46185024 41 CAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCACTGCCG CAGGTGCAGTCGGAGATCCGCGGTGGCTGGCACCACTGCCG < 41bp 0.475356845866229 0.778448059070036 0.74314857 0.8976917 prediction 0.556896118140071 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46185004 chr19:46185005 nonsynonymous SNV 0.929 1 22 hm5C_associated_SNPs_103967 0 0 1 NONO POSTAR2 ENCODE chr19:46184921-46185028
64251 chr1 246729892 246729892 1 + C A rs193037102 246729888 + 246729868 246729908 41 CAAGCTCCGTGACAGCACGTCGGCCGCCATGTCGCCGAGTG CAAGCTCCGTGACAGCACGTCGGCAGCCATGTCGCCGAGTG < 41bp 0.48381076138092 0.778372015623 0.22516552 0.27715972 prediction 0.556744031246 Functional Gain - CNST ENSG00000162852 UTR5 Human protein_coding chr1:246729888 chr1:246729892 . . 0 25 hm5C_associated_SNPs_103974 0 0 5 FXR2 POSTAR2 ENCODE chr1:246729833-246729956
64251 chr19 7711497 7711497 1 + C G rs72994460 7711496 + 7711476 7711516 41 CTCTAGTCTGTTCCCCTGTCCCGCAGGAGTGCCCCTGAGCC CTCTAGTCTGTTCCCCTGTCCGGCAGGAGTGCCCCTGAGCC < 41bp 0.522344550794867 0.800708467104851 0.36042607 0.8214053 prediction 0.556727832619968 Functional Gain - STXBP2 ENSG00000076944 intronic Human protein_coding chr19:7711496 chr19:7711497 . . 0 22 hm5C_associated_SNPs_103975 0 0 5 DDX42 POSTAR2 ENCODE chr19:7711486-7711535
64251 chr19 1220443 1220443 1 + C G ACC 1220442 + 1220422 1220462 41 TTGTGCACAAGGACATCAAGCCGGGGAACCTGCTGCTCACC TTGTGCACAAGGACATCAAGCGGGGGAACCTGCTGCTCACC < 41bp 0.551788508858248 0.830133080168925 0.9471406 0.95618564 prediction 0.556689142621355 Functional Gain - STK11 ENSG00000118046 CDS Human protein_coding chr19:1220442 chr19:1220443 nonsynonymous SNV 0.860 4 22 hm5C_associated_SNPs_103979 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:1220386-1220456
64251 chr17 25628924 25628924 1 + T G SKCM 25628922 + 25628902 25628942 41 TCCAGATGGTTCATACTTTGCTTGGTCACAAGGACATCGCA TCCAGATGGTTCATACTTTGCTGGGTCACAAGGACATCGCA < 41bp 0.569237902438567 0.847561634030896 0.029960304 0.35461664 prediction 0.556647463184659 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628922 chr17:25628924 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_103981 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:25628872-25628956
64251 chr1 9711820 9711820 1 + C G rs369737325 9711819 + 9711799 9711839 41 AGCGCAGTCGCTCCGAGCGGCCGCGAGCAGAGCCGCCCAGC AGCGCAGTCGCTCCGAGCGGCGGCGAGCAGAGCCGCCCAGC < 41bp 0.518207425050488 0.796516223633064 0.6837038 0.90434283 prediction 0.556617597165151 Functional Gain - PIK3CD ENSG00000171608 UTR5 Human protein_coding chr1:9711819 chr1:9711820 . . 0 22 hm5C_associated_SNPs_103983 0 0 1 DDX3X POSTAR2 ENCODE chr1:9711814-9711862
64251 chrX 70444261 70444261 1 + T G rs104894825 70444259 + 70444239 70444279 41 CCTTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACC CCTTCCCGCAAGGGCTCGGGCTGCGGCCACCGCCTCTCACC < 41bp 0.596042862468637 0.874345445283903 0.14182931 0.21874544 prediction 0.556605165630532 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444259 chrX:70444261 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_103985 4 0 3 RPS3 POSTAR2 ENCODE chrX:70444229-70444271
64251 chr7 155251243 155251243 1 + C G rs199573836 155251242 + 155251222 155251262 41 GCCCGCGGTCCTGCAGGCGCCCGGCAACCACCAGCACCCGC GCCCGCGGTCCTGCAGGCGCCGGGCAACCACCAGCACCCGC < 41bp 0.556274617783604 0.834550957246342 0.28376508 0.6852503 prediction 0.556552678925475 Functional Gain - EN2 ENSG00000164778 CDS Human protein_coding chr7:155251242 chr7:155251243 synonymous SNV . 0 22 hm5C_associated_SNPs_103986 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:155251226-155251255
64251 chr17 3558559 3558559 1 + T G UCEC 3558557 + 3558537 3558577 41 ATCCGCAGCAGCGCCATTAGCATCATAAACCAGGTGATTGG ATCCGCAGCAGCGCCATTAGCAGCATAAACCAGGTGATTGG < 41bp 0.593161252349369 0.871431474238994 0.0781306 0.5353913 prediction 0.55654044377925 Functional Gain - CTNS ENSG00000040531 CDS Human protein_coding chr17:3558557 chr17:3558559 nonsynonymous SNV 0.772 2 23 hm5C_associated_SNPs_103988 0 0 1 GRWD1 POSTAR2 ENCODE chr17:3558527-3558650
64251 chr9 99252342 99252342 1 + C G rs12347119 99252341 + 99252321 99252361 41 AAGAGCCCTGTTTCCCAGCACCGCGGAGCTGCACTGCACAC AAGAGCCCTGTTTCCCAGCACGGCGGAGCTGCACTGCACAC < 41bp 0.54697435574119 0.825211762358307 0.38425854 0.7793336 prediction 0.556474813234235 Functional Gain - HABP4 ENSG00000130956 UTR3 Human protein_coding chr9:99252341 chr9:99252342 . . 0 22 hm5C_associated_SNPs_103991 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:99252319-99252377
64251 chr6 26598831 26598831 1 + C A THCA 26598827 + 26598807 26598847 41 CAGGATCTTTGGAGCCCCGCCACCCTCAGAGAGCATGGAGG CAGGATCTTTGGAGCCCCGCCACCATCAGAGAGCATGGAGG < 41bp 0.378032902678027 0.778228305981202 0.16396648 0.1803484 prediction 0.556456611962403 Functional Gain - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598827 chr6:26598831 synonymous SNV . 0 25 hm5C_associated_SNPs_103993 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr7 150773473 150773473 1 + C G rs569148643 150773469 + 150773449 150773489 41 GTGTAGCCGCCACCGAGGGACAGCCGAGGGACCGATGGACG GTGTAGCCGCCACCGAGGGACAGCGGAGGGACCGATGGACG < 41bp 0.498243620896697 0.778226230678828 0.26975268 0.5062968 prediction 0.556452461357656 Functional Gain - SLC4A2 ENSG00000244151 ncRNA_exonic Human antisense chr7:150773469 chr7:150773473 . . 0 25 hm5C_associated_SNPs_103994 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr7:150773425-150773474
64251 chr9 101597549 101597549 1 + T A rs201140510 101597545 + 101597525 101597565 41 TTTTAGGTCTCCAACAATGGCTGGTGGGCTGTTTGCTGTGA TTTTAGGTCTCCAACAATGGCTGGAGGGCTGTTTGCTGTGA < 41bp 0.566900218031705 0.84512617284102 0.047884613 0.14220113 prediction 0.556451909618631 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101597545 chr9:101597549 synonymous SNV . 0 25 hm5C_associated_SNPs_103995 0 0 5 EFTUD2 POSTAR2 ENCODE chr9:101597548-101597672
64251 chr8 48882479 48882479 1 + T C UCEC 48882477 + 48882457 48882497 41 ATGCAAAACGTCTGCATGGCCTTGATGAAGAAGCAGAACAG ATGCAAAACGTCTGCATGGCCTCGATGAAGAAGCAGAACAG < 41bp 0.531397695442071 0.809579511994182 0.047439873 0.36122313 prediction 0.556363633104222 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48882477 chr8:48882479 synonymous SNV . 0 23 hm5C_associated_SNPs_103997 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr8:48882394-48882480
64251 chr15 45694565 45694565 1 + C G rs562677253 45694564 + 45694544 45694584 41 CGGCCTGCGAGCTCGGTGTTCCGCTTTTTGTGGGCCGGGTG CGGCCTGCGAGCTCGGTGTTCGGCTTTTTGTGGGCCGGGTG < 41bp 0.529032887649824 0.807195340140529 0.3267424 0.6757977 prediction 0.556324904981409 Functional Gain - SPATA5L1 ENSG00000171763 UTR5 Human protein_coding chr15:45694564 chr15:45694565 . . 0 22 hm5C_associated_SNPs_103998 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:45694560-45694580
64251 chr11 63994300 63994300 1 + C G STAD 63994299 + 63994279 63994319 41 AACCCTGGCTCTTCGACGCCCCCAAGTTCCGCCTGCACTCA AACCCTGGCTCTTCGACGCCCGCAAGTTCCGCCTGCACTCA < 41bp 0.550503004863529 0.828657743350233 0.03451982 0.16716579 prediction 0.556309476973408 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994299 chr11:63994300 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_104000 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:63994300-63994301
64251 chr5 640669 640669 1 + C G rs138955347 640668 + 640648 640688 41 GAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGAC GAGCAGCAGCAGCAGCACGCCGGGGAGATGAGCGAGGTGAC < 41bp 0.524627962922791 0.80276733909735 0.40422603 0.8915684 prediction 0.556278752349117 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:640668 chr5:640669 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_104002 0 0 5 BUD13 POSTAR2 ENCODE chr5:640649-640722
64251 chr11 63671476 63671476 1 + C G KIRP 63671475 + 63671455 63671495 41 TAGCCTAACCATGCCAGGGTCCCGGGCCTCCACGGCTTCTG TAGCCTAACCATGCCAGGGTCGCGGGCCTCCACGGCTTCTG < 41bp 0.468346142939993 0.778110721240551 0.4825989 0.89240444 prediction 0.556221442481102 Functional Gain - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63671475 chr11:63671476 synonymous SNV . 0 22 hm5C_associated_SNPs_104006 0 0 1 QKI POSTAR2 ENCODE chr11:63671441-63671505
64251 chr1 1244599 1244599 1 + C G rs557118889 1244598 + 1244578 1244618 41 GCTCAGGCCGGCCGCCCTTCCCGCCCGAGGTCCTGGCCGAG GCTCAGGCCGGCCGCCCTTCCGGCCCGAGGTCCTGGCCGAG < 41bp 0.503479635092485 0.781588410573438 0.16265848 0.34504056 prediction 0.556217550961908 Functional Gain - PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1244598 chr1:1244599 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_104008 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:1244580-1244600
64251 chr9 110081111 110081111 1 + T C UCEC 110081109 + 110081089 110081129 41 CGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTTTCAACAA CGAGAGCAAGTAATTGCAGCCCCGAGAGCCAGTTTCAACAA < 41bp 0.49701786217255 0.778091644306293 0.02123189 0.08199391 prediction 0.556183288612586 Functional Gain - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110081109 chr9:110081111 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_104010 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:110081032-110081115
64251 chr1 243480092 243480092 1 + T G LGG 243480089 + 243480069 243480109 41 CTTGATGTCTGCACTAGTTTCCGTAAGGAGCAGCTTGGCAG CTTGATGTCTGCACTAGTTTCCGGAAGGAGCAGCTTGGCAG < 41bp 0.408325714119124 0.778035158820472 0.42273957 0.89764154 prediction 0.556070317640943 Functional Gain - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243480089 chr1:243480092 nonsynonymous SNV 0.364 2 24 hm5C_associated_SNPs_104015 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:243480080-243480100
64251 chr6 26205024 26205024 1 + T A STAD 26205020 + 26205000 26205040 41 GTGTCAAGCGCATTTCTGGTCTCATCTACGAGGAGACTCGC GTGTCAAGCGCATTTCTGGTCTCAACTACGAGGAGACTCGC < 41bp 0.557485585563432 0.835519917975551 0.31786215 0.30673325 prediction 0.556068664824238 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26205020 chr6:26205024 nonsynonymous SNV 0.021 0 25 hm5C_associated_SNPs_104016 0 0 50 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26204840-26205100
64251 chr1 161138933 161138933 1 + C G rs12735723 161138929 + 161138909 161138949 41 GGGTCAGTGTTCTCAGAGGCCAGCCGGTCTGTGGGCTCAGC GGGTCAGTGTTCTCAGAGGCCAGCGGGTCTGTGGGCTCAGC < 41bp 0.50890924871806 0.786887482871308 0.26623887 0.5124419 prediction 0.555956468306497 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161138929 chr1:161138933 nonsynonymous SNV 0.767 3 25 hm5C_associated_SNPs_104022 1 0 3 DDX24 POSTAR2 ENCODE chr1:161138898-161138977
64251 chr14 58831291 58831291 1 + T C SARC 58831289 + 58831269 58831309 41 CTCATATAGAAGCTCATAGTCTTGAATTGTCTTCATTAGAC CTCATATAGAAGCTCATAGTCTCGAATTGTCTTCATTAGAC < 41bp 0.491230542855311 0.777967570160916 0.11133677 0.53934586 prediction 0.555935140321833 Functional Gain - ARID4A ENSG00000032219 CDS Human protein_coding chr14:58831289 chr14:58831291 synonymous SNV . 0 23 hm5C_associated_SNPs_104023 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:58831283-58831309
64251 chr12 66696538 66696538 1 + T G STAD 66696536 + 66696516 66696556 41 GAGGAGCTCTGCAGTGGGGGCGTAAAGGCTGGCAGCCTCCC GAGGAGCTCTGCAGTGGGGGCGGAAAGGCTGGCAGCCTCCC < 41bp 0.588723156302368 0.866682710005345 0.8379899 0.8999784 prediction 0.555919107405955 Functional Gain - HELB ENSG00000127311 CDS Human protein_coding chr12:66696536 chr12:66696538 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_104025 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:66696537-66696538
64251 chr4 151153909 151153909 1 + T A LUSC 151153905 + 151153885 151153925 41 GATGGCAGTGCCATGGTGTACAACTTAGCCAATGCCCTCAG GATGGCAGTGCCATGGTGTACAACATAGCCAATGCCCTCAG < 41bp 0.455928833246755 0.777946919766977 0.14583483 0.25687003 prediction 0.555893839533954 Functional Gain - DCLK2 ENSG00000170390 CDS Human protein_coding chr4:151153905 chr4:151153909 nonsynonymous SNV 0.957 4 25 hm5C_associated_SNPs_104027 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr4:151153909-151153910
64251 chr22 25016930 25016930 1 + C A HNSC 25016926 + 25016906 25016946 41 TGCTTCGGGAGGGGGAGAGACTGACCCTGCCGCAGCTGGCT TGCTTCGGGAGGGGGAGAGACTGAACCTGCCGCAGCTGGCT < 41bp 0.363368724385701 0.777940204508445 0.42059845 0.7922021 prediction 0.555880409016891 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25016926 chr22:25016930 nonsynonymous SNV 0.106 0 25 hm5C_associated_SNPs_104029 0 0 3 LIN28B POSTAR2 ENCODE chr22:25016893-25016973
64251 chr11 3846320 3846320 1 + C A UCEC 3846316 + 3846296 3846336 41 TCATCTCCTTCTTCTCGGCGCTGGCTGTCTACTTTCGGCAC TCATCTCCTTCTTCTCGGCGCTGGATGTCTACTTTCGGCAC < 41bp 0.411066250886328 0.777933785196004 0.02125755 0.04070744 prediction 0.555867570392009 Functional Gain - PGAP2 ENSG00000148985 CDS Human protein_coding chr11:3846316 chr11:3846320 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_104030 0 0 2 PRPF8 POSTAR2 ENCODE chr11:3846306-3846389
64251 chr19 58101420 58101420 1 + C G SKCM 58101419 + 58101399 58101439 41 GATGAAGAGACACCTTCTGACCAGAATGTTTCTGTAGGAGT GATGAAGAGACACCTTCTGACGAGAATGTTTCTGTAGGAGT < 41bp 0.534749346247046 0.812679901463728 0.021070272 0.2814605 prediction 0.555861110433365 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58101419 chr19:58101420 nonsynonymous SNV 0.390 0 22 hm5C_associated_SNPs_104031 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58101386-58101446
64251 chr19 50549819 50549819 1 + T A LUSC 50549815 + 50549795 50549835 41 AAGAAGCCGTTGGTGTGTAACGAATGCGGGAAAACGTTCCG AAGAAGCCGTTGGTGTGTAACGAAAGCGGGAAAACGTTCCG < 41bp 0.483544896177964 0.777926630631541 0.3849053 0.681537 prediction 0.555853261263081 Functional Gain - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549815 chr19:50549819 nonsynonymous SNV 0.583 2 25 hm5C_associated_SNPs_104032 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:50549798-50549821
64251 chr2 70131394 70131394 1 + T G UCEC 70131392 + 70131372 70131412 41 TCTTCTCATCATAGGCAGTACATGAATCGAAAAGGTGGATT TCTTCTCATCATAGGCAGTACAGGAATCGAAAAGGTGGATT < 41bp 0.524622070715335 0.802545015307662 0.23067045 0.191481 prediction 0.555845889184654 Functional Gain - SNRNP27 ENSG00000124380 CDS Human protein_coding chr2:70131392 chr2:70131394 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_104033 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:70131380-70131431
64251 chr12 57921968 57921968 1 + C A LIHC 57921964 + 57921944 57921984 41 GCCAGAAGCCCCCTGTCTACCCCCCGAGAGCCCTGCCTCAG GCCAGAAGCCCCCTGTCTACCCCCAGAGAGCCCTGCCTCAG < 41bp 0.351439391710846 0.7778925426538 0.053349733 0.14591911 prediction 0.5557850853076 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921964 chr12:57921968 synonymous SNV . 0 25 hm5C_associated_SNPs_104036 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:57921958-57921996
64251 chr14 55817153 55817153 1 + C G rs560778845 55817152 + 55817132 55817172 41 GCTCCAGAAGAAAGAGCACCCCCCGGAAGTCAGCAGGGAAA GCTCCAGAAGAAAGAGCACCCGCCGGAAGTCAGCAGGGAAA < 41bp 0.526711134196103 0.804551785344606 0.04723364 0.07292679 prediction 0.555681302297006 Functional Gain - FBXO34 ENSG00000178974 CDS Human protein_coding chr14:55817152 chr14:55817153 synonymous SNV . 0 22 hm5C_associated_SNPs_104039 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:55817152-55817153
64251 chr9 129643102 129643102 1 + T G GBM 129643100 + 129643080 129643120 41 CCCGAGAGAACAGATGTGTACGTGGAACAGAAACTAGAAAA CCCGAGAGAACAGATGTGTACGGGGAACAGAAACTAGAAAA < 41bp 0.573363007728221 0.851116904983475 0.25379884 0.878163 prediction 0.555507794510508 Functional Gain - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129643100 chr9:129643102 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_104042 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:129643100-129643120
64251 chr19 58991801 58991801 1 - A T LUSC 58991805 - 58991785 58991825 41 GACTGCACACCTGGCCCACTCGTGTGTGTCCGGTGGTGGAT GACTGCACACCTGGCCCACTCGTGAGTGTCCGGTGGTGGAT < 41bp 0.498831817085369 0.777745706098807 0.7701174 0.8761697 prediction 0.555491412197614 Functional Gain - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58991805 chr19:58991801 nonsynonymous SNV 0.485 1 25 hm5C_associated_SNPs_104043 0 0 4 FAM120A POSTAR2 ENCODE chr19:58991797-58991835
64251 chr9 131768571 131768571 1 + C A OV 131768567 + 131768547 131768587 41 GCTTCTACCTGCTCATCTCTCAGGCGATGCGGTACCTTAGG GCTTCTACCTGCTCATCTCTCAGGAGATGCGGTACCTTAGG < 41bp 0.626262679327702 0.903998525902891 0.9493181 0.9538663 prediction 0.555471693150377 Functional Gain - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131768567 chr9:131768571 nonsynonymous SNV 0.572 4 25 hm5C_associated_SNPs_104045 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131768518-131768572
64251 chr15 42695007 42695007 1 + C A BLCA 42695003 + 42694983 42695023 41 ATCTCTCAGATGCACGGGAACAAGCAGCACCTGCAGAAGGA ATCTCTCAGATGCACGGGAACAAGAAGCACCTGCAGAAGGA < 41bp 0.386069901912508 0.777704927336827 0.15735373 0.776228 prediction 0.555409854673655 Functional Gain - CAPN3 ENSG00000092529 CDS Human protein_coding chr15:42695003 chr15:42695007 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_104049 0 0 1 SF3B4 POSTAR2 ENCODE chr15:42694916-42695022
64251 chr7 6647738 6647738 1 + T A rs4416743 6647734 + 6647714 6647754 41 CGCCCACCCCGCCCTGCCCACGCATCCCGGCCACACCTTCA CGCCCACCCCGCCCTGCCCACGCAACCCGGCCACACCTTCA < 41bp 0.550314309742374 0.828018347685456 0.30224854 0.43693548 prediction 0.555408075886163 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6647734 chr7:6647738 nonsynonymous SNV 0.673 2 25 hm5C_associated_SNPs_104050 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:6647715-6647741
64251 chr4 130023911 130023911 1 + C G KIRC 130023910 + 130023890 130023930 41 CTCCAGCCCCACTTGGAGAACCAGGAAAACCTTTCAATGAA CTCCAGCCCCACTTGGAGAACGAGGAAAACCTTTCAATGAA < 41bp 0.519379833496552 0.797067062291664 0.9432763 0.9400753 prediction 0.555374457590223 Functional Gain - C4orf33 ENSG00000151470 CDS Human protein_coding chr4:130023910 chr4:130023911 nonsynonymous SNV 0.983 3 22 hm5C_associated_SNPs_104053 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:130023905-130023938
64251 chr14 103568614 103568614 1 + T A rs10131298 103568610 + 103568590 103568630 41 GGCGCGCTATGGACGTGTGCCTGCTTTACGACGGGCTGGCA GGCGCGCTATGGACGTGTGCCTGCATTACGACGGGCTGGCA < 41bp 0.570774665292848 0.84846166612274 0.21232113 0.27893892 prediction 0.555374001659785 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103568610 chr14:103568614 nonsynonymous SNV 0.866 0 25 hm5C_associated_SNPs_104054 0 0 3 GRWD1 POSTAR2 ENCODE chr14:103568566-103568619
64251 chr11 33373268 33373268 1 + T C PRAD 33373266 + 33373246 33373286 41 GCACTTTTGTGGAGGACACTCATGAAAACACAGAATTGGTA GCACTTTTGTGGAGGACACTCACGAAAACACAGAATTGGTA < 41bp 0.498141177966019 0.777679797989324 0.27958593 0.16432455 prediction 0.555359595978649 Functional Gain - HIPK3 ENSG00000110422 CDS Human protein_coding chr11:33373266 chr11:33373268 synonymous SNV . 0 23 hm5C_associated_SNPs_104055 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr11:33373248-33373269
64251 chr7 99017041 99017041 1 - G T LUSC 99017045 - 99017025 99017065 41 CTCAGCCAGAGCAGCCACGACAGCCACAGTGTGTGCACTCG CTCAGCCAGAGCAGCCACGACAGCAACAGTGTGTGCACTCG < 41bp 0.364093166715856 0.777671939649005 0.2758087 0.2808497 prediction 0.55534387929801 Functional Gain - BUD31 ENSG00000106245 CDS Human protein_coding chr7:99017045 chr7:99017041 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_104057 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99017024-99017051
64251 chr2 99812127 99812127 1 + T G KIRC 99812124 + 99812104 99812144 41 GCACTGGGGAGTTAGTAGTGCAGTGGCATCTGAAACCTGTG GCACTGGGGAGTTAGTAGTGCAGGGGCATCTGAAACCTGTG < 41bp 0.394647725180809 0.777597774021614 0.09389773 0.53625286 prediction 0.555195548043227 Functional Gain - MRPL30 ENSG00000185414;ENSG00000241962 CDS Human other chr2:99812124 chr2:99812127 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_104061 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:99812112-99812157
64251 chr12 8248294 8248294 1 + C A UCEC 8248290 + 8248270 8248310 41 CTTGTGGGGAGACTTCAGCACTGCCTCCAGGTAATGGGCAT CTTGTGGGGAGACTTCAGCACTGCATCCAGGTAATGGGCAT < 41bp 0.364079275331662 0.777573707598711 0.027949423 0.23369792 prediction 0.555147415197423 Functional Gain - NECAP1 ENSG00000089818 CDS Human protein_coding chr12:8248290 chr12:8248294 synonymous SNV . 0 25 hm5C_associated_SNPs_104065 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr12:8248267-8248299
64251 chr9 71820036 71820036 1 + C G rs375746056 71820035 + 71820015 71820055 41 GATGGAAATGGGTGAGCAGCCCGGAATGTAGGCGGTGGCCT GATGGAAATGGGTGAGCAGCCGGGAATGTAGGCGGTGGCCT < 41bp 0.499308140282332 0.777543535473502 0.41443712 0.8486384 prediction 0.555087070947005 Functional Gain - TJP2 ENSG00000119139 UTR5 Human protein_coding chr9:71820035 chr9:71820036 . . 0 22 hm5C_associated_SNPs_104070 0 0 2 HNRNPM POSTAR2 ENCODE chr9:71819940-71820069
64251 chr1 227171472 227171472 1 + C G rs541611601 227171471 + 227171451 227171491 41 CCCTGGCCCAGGCCTGTTCCCCGAGCACCTGATCGACGTGC CCCTGGCCCAGGCCTGTTCCCGGAGCACCTGATCGACGTGC < 41bp 0.459421256867819 0.777520242378324 0.82847404 0.91538763 prediction 0.555040484756649 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171471 chr1:227171472 synonymous SNV . 0 22 hm5C_associated_SNPs_104072 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:227171459-227171479
64251 chr7 99971777 99971777 1 + T G KIRP 99971775 + 99971755 99971795 41 CCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCACAGCTC CCCCTTCTCCTTCTATTACCCCGGGGAGTTAGCCACAGCTC < 41bp 0.594149131863155 0.871665343583487 0.03424284 0.87777364 prediction 0.555032423440665 Functional Gain - PILRA ENSG00000085514 CDS Human protein_coding chr7:99971775 chr7:99971777 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_104073 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:99971775-99971805
64251 chr1 76253189 76253189 1 + C G LUAD 76253188 + 76253168 76253208 41 CTTTATTTTGAAAGGGCACTCCACAGAAGGATGTTATTATC CTTTATTTTGAAAGGGCACTCGACAGAAGGATGTTATTATC < 41bp 0.49467750261197 0.777499850339758 0.2468018 0.23414728 prediction 0.554999700679515 Functional Gain - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76253188 chr1:76253189 nonsynonymous SNV 0.796 1 22 hm5C_associated_SNPs_104074 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:76253074-76253815
64251 chr14 56585389 56585389 1 + C G LUAD 56585388 + 56585368 56585408 41 AGCGGGGCTCCATGTTTTCCCCTGGCCAGGAGGAACACTGC AGCGGGGCTCCATGTTTTCCCGTGGCCAGGAGGAACACTGC < 41bp 0.526422203309169 0.803897807308221 0.055363685 0.36262348 prediction 0.554951207998103 Functional Gain - PELI2 ENSG00000139946 CDS Human protein_coding chr14:56585388 chr14:56585389 nonsynonymous SNV 0.988 1 22 hm5C_associated_SNPs_104077 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:56585374-56585400
64251 chr19 46376204 46376204 1 + C A LIHC 46376200 + 46376180 46376220 41 TCAACAACCTAATGTCAGAACAGACACCAGCACCTCCCAAA TCAACAACCTAATGTCAGAACAGAAACCAGCACCTCCCAAA < 41bp 0.37536756696539 0.777474237531284 0.014580369 0.03644061 prediction 0.554948475062567 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46376200 chr19:46376204 nonsynonymous SNV 0.909 0 25 hm5C_associated_SNPs_104078 0 0 1 RBM15 POSTAR2 ENCODE chr19:46376181-46376218
64251 chr1 22852789 22852789 1 + C G LUSC 22852788 + 22852768 22852808 41 CGCAGGTGTTTGTGACGTTGCCAGATTCTCAGGCATCTCAG CGCAGGTGTTTGTGACGTTGCGAGATTCTCAGGCATCTCAG < 41bp 0.530742876753621 0.808213267564698 0.90943766 0.9240955 prediction 0.554940781622153 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22852788 chr1:22852789 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_104080 0 0 1 PPIG POSTAR2 ENCODE chr1:22852769-22852819
64251 chr19 41725367 41725367 1 + T G OV 41725365 + 41725345 41725385 41 CTTGGCGCTGTGCGGCTGGGCGTGCATGGCCCCCAGGGGTG CTTGGCGCTGTGCGGCTGGGCGGGCATGGCCCCCAGGGGTG < 41bp 0.589539463602682 0.866956958737721 0.3500686 0.837396 prediction 0.554834990270078 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41725365 chr19:41725367 nonsynonymous SNV 0.122 0 23 hm5C_associated_SNPs_104084 0 0 2 DDX3X POSTAR2 ENCODE chr19:41725297-41725383
64251 chr1 229772136 229772136 1 + C G COAD 229772132 + 229772112 229772152 41 GGCCCTTCTCCCGGACACCCCAGGCCCAGAGCCAGAGCTGT GGCCCTTCTCCCGGACACCCCAGGGCCAGAGCCAGAGCTGT < 41bp 0.489491019626854 0.777390938372839 0.7655735 0.88654506 prediction 0.554781876745677 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772132 chr1:229772136 synonymous SNV . 0 25 hm5C_associated_SNPs_104085 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229772100-229772140
64251 chr16 30977133 30977133 1 + C G GBM 30977132 + 30977112 30977152 41 GACCTGATGGGCCGCCGCCCCCTGAGTACCCCCCACCTCCT GACCTGATGGGCCGCCGCCCCGTGAGTACCCCCCACCTCCT < 41bp 0.461857169083622 0.777388208661957 0.104846805 0.23724458 prediction 0.554776417323915 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30977132 chr16:30977133 nonsynonymous SNV 0.639 3 22 hm5C_associated_SNPs_104087 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30977087-30977154
64251 chr2 110373589 110373589 1 + C A UCEC 110373585 + 110373565 110373605 41 AGGAGGGAGTGGGGGAGGAACGACCTGTTAAAGGCCACTCG AGGAGGGAGTGGGGGAGGAACGACATGTTAAAGGCCACTCG < 41bp 0.626919150903671 0.904295444619229 0.7945771 0.58153075 prediction 0.554752587431116 Functional Gain - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373585 chr2:110373589 nonsynonymous SNV 0.128 0 25 hm5C_associated_SNPs_104089 0 0 3 GRSF1 POSTAR2 ENCODE chr2:110373537-110373608
64251 chr19 35551550 35551550 1 + C G UCEC 35551549 + 35551529 35551569 41 AGGCGGAACCGGGTCCTGTCCCGATGGCGAGTGTTTGCCGG AGGCGGAACCGGGTCCTGTCCGGATGGCGAGTGTTTGCCGG < 41bp 0.467893774801989 0.777337897096802 0.17154485 0.5625905 prediction 0.554675794193604 Functional Gain - HPN ENSG00000105707 CDS Human protein_coding chr19:35551549 chr19:35551550 nonsynonymous SNV 0.988 2 22 hm5C_associated_SNPs_104095 0 0 2 PPIG POSTAR2 ENCODE chr19:35551529-35551557
64251 chr20 57019226 57019226 1 + C A LAML 57019222 + 57019202 57019242 41 GGGAAGGAAGAAGGCCTTAGCACCCGGCTCTTGGCTCTGGT GGGAAGGAAGAAGGCCTTAGCACCAGGCTCTTGGCTCTGGT < 41bp 0.378514206171239 0.777334345443751 0.28442514 0.33461416 prediction 0.554668690887501 Functional Gain - VAPB ENSG00000124164 CDS Human protein_coding chr20:57019222 chr20:57019226 synonymous SNV . 0 25 hm5C_associated_SNPs_104096 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:57019130-57019248
64251 chr6 26156793 26156793 1 + T G UCEC 26156791 + 26156771 26156811 41 CAAGGAGCGCAGCGGCGTATCTTTGGCCGCTCTCAAGAAAG CAAGGAGCGCAGCGGCGTATCTGTGGCCGCTCTCAAGAAAG < 41bp 0.453751472479322 0.777313247137594 0.07819387 0.1943863 prediction 0.554626494275187 Functional Gain - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156791 chr6:26156793 nonsynonymous SNV 0.221 1 23 hm5C_associated_SNPs_104101 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26156540-26156820
64251 chr20 31601670 31601670 1 + C A rs45589833 31601666 + 31601646 31601686 41 TGTGGAACTGCTGGCTGACACCCGCGTGACCCAGAGCTCCA TGTGGAACTGCTGGCTGACACCCGAGTGACCCAGAGCTCCA < 41bp 0.633735703828309 0.911030643475164 0.31098223 0.8208331 prediction 0.554589879293711 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31601666 chr20:31601670 synonymous SNV . 0 25 hm5C_associated_SNPs_104103 0 0 3 GRWD1 POSTAR2 ENCODE chr20:31601654-31601685
64251 chr11 119206597 119206597 1 + C G TGCT 119206596 + 119206576 119206616 41 CTTCACCCTGAGGCTGGCTACCCAGGCACTCAGCCAGCTCC CTTCACCCTGAGGCTGGCTACGCAGGCACTCAGCCAGCTCC < 41bp 0.475104471405744 0.777269239472089 0.65275836 0.25204444 prediction 0.554538478944178 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206596 chr11:119206597 synonymous SNV . 0 22 hm5C_associated_SNPs_104104 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:119206500-119206660
64251 chr16 67914579 67914579 1 + C G OV 67914575 + 67914555 67914595 41 TGTCATCTCCTCAGCTTCCACTGCCCTGTCCCAGGACATCC TGTCATCTCCTCAGCTTCCACTGCGCTGTCCCAGGACATCC < 41bp 0.512031942058337 0.789284316106709 0.07099965 0.14499524 prediction 0.554504748096744 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914575 chr16:67914579 synonymous SNV . 0 25 hm5C_associated_SNPs_104107 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67914579-67914605
64251 chr14 55510099 55510099 1 + T G GBM 55510097 + 55510077 55510117 41 GAATTGTAGTAGTCGGCACTCTTCAGGGCTTCCGTCTAAAA GAATTGTAGTAGTCGGCACTCTGCAGGGCTTCCGTCTAAAA < 41bp 0.532417646041081 0.809669785320162 0.077460915 0.10014936 prediction 0.554504278558161 Functional Gain - SOCS4 ENSG00000180008 CDS Human protein_coding chr14:55510097 chr14:55510099 nonsynonymous SNV 0.969 0 23 hm5C_associated_SNPs_104108 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:55510070-55510112
64251 chr12 108098446 108098446 1 + T A SKCM 108098442 + 108098422 108098462 41 TTTGTATGACTGCCGAAGTCCAGATGAAAGCCATCGAATGT TTTGTATGACTGCCGAAGTCCAGAAGAAAGCCATCGAATGT < 41bp 0.460698890196193 0.777221350898812 0.32934773 0.20978165 prediction 0.554442701797623 Functional Gain - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108098442 chr12:108098446 nonsynonymous SNV 0.784 0 25 hm5C_associated_SNPs_104110 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:108098403-108098496
64251 chr10 105128280 105128280 1 + C A BLCA 105128276 + 105128256 105128296 41 GGCCACGGTCGTCTCAGGTTCAGCCTCAGGTCCTGCGGCTC GGCCACGGTCGTCTCAGGTTCAGCATCAGGTCCTGCGGCTC < 41bp 0.622485323322713 0.899692028491496 0.072111756 0.07896721 prediction 0.554413410337567 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128276 chr10:105128280 synonymous SNV . 0 25 hm5C_associated_SNPs_104111 0 0 1 PRPF8 POSTAR2 ENCODE chr10:105128280-105128352
64251 chr17 34893216 34893216 1 + T G BRCA 34893214 + 34893194 34893234 41 GAGCTTCTCGGTGTAATTATCTTTGGGGCAGGGCTGTTGTA GAGCTTCTCGGTGTAATTATCTGTGGGGCAGGGCTGTTGTA < 41bp 0.454927503787076 0.777177038673726 0.090584606 0.24616262 prediction 0.554354077347453 Functional Gain - PIGW ENSG00000184886 CDS Human other chr17:34893214 chr17:34893216 nonsynonymous SNV 0.688 0 23 hm5C_associated_SNPs_104115 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:34893172-34893229
64251 chr7 36193946 36193946 1 + C G KIRC 36193945 + 36193925 36193965 41 TGGCGGACCATGGGGAGCACCCTGGGCTGCCACCGCTCCAT TGGCGGACCATGGGGAGCACCGTGGGCTGCCACCGCTCCAT < 41bp 0.462320936432165 0.777174926362944 0.9298306 0.9398949 prediction 0.554349852725889 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36193945 chr7:36193946 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_104116 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:36193920-36193948
64251 chr7 94293249 94293249 1 + C A LUSC 94293245 + 94293225 94293265 41 CTTCGTGACAAGCATGATGACCGGCCGTGCTGCCCGTTGGG CTTCGTGACAAGCATGATGACCGGACGTGCTGCCCGTTGGG < 41bp 0.375750015944523 0.777164970327884 0.114917725 0.4074005 prediction 0.554329940655768 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293245 chr7:94293249 synonymous SNV . 0 25 hm5C_associated_SNPs_104117 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr7:94293243-94293265
64251 chr20 62670791 62670791 1 + C G rs2427596 62670787 + 62670767 62670807 41 TGCCTCCGGAGGGGTGACCACGGCCTGGGCTCAGAGACTGC TGCCTCCGGAGGGGTGACCACGGCGTGGGCTCAGAGACTGC < 41bp 0.500167963100177 0.777318305123345 0.36329633 0.8452874 prediction 0.554300684046336 Functional Gain - C20orf204 ENSG00000196421 ncRNA_exonic Human protein_coding chr20:62670787 chr20:62670791 . . 0 25 hm5C_associated_SNPs_104118 0 0 3 CSTF2T POSTAR2 ENCODE chr20:62670768-62670820
64251 chr18 60242089 60242089 1 + C G LUAD 60242085 + 60242065 60242105 41 CTTACCAGGCTCTCCCCTTGCTGCCGGCGTGTTACCCAGCC CTTACCAGGCTCTCCCCTTGCTGCGGGCGTGTTACCCAGCC < 41bp 0.531584108078254 0.80872260820272 0.1826208 0.30696446 prediction 0.554277000248932 Functional Gain - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60242085 chr18:60242089 synonymous SNV . 0 25 hm5C_associated_SNPs_104121 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:60242054-60242106
64251 chr15 69452992 69452992 1 + C G rs372391353 69452991 + 69452971 69453011 41 CTCACACAAGCGCTTCCTTGCCGAGAGGCTGGAGCTGCGGC CTCACACAAGCGCTTCCTTGCGGAGAGGCTGGAGCTGCGGC < 41bp 0.499064870956138 0.777130304846643 0.47347233 0.9014838 prediction 0.554260609693285 Functional Gain - MIR548H4 ENSG00000266374 ncRNA_exonic Human other chr15:69452991 chr15:69452992 . . 0 22 hm5C_associated_SNPs_104122 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:69452960-69453020
64251 chr17 21094308 21094308 1 + C G HNSC 21094307 + 21094287 21094327 41 CGAAGCCCTGTGGAGGTGGCCCAGGATGTTCTTGCTGCTGT CGAAGCCCTGTGGAGGTGGCCGAGGATGTTCTTGCTGCTGT < 41bp 0.476304168635129 0.777130025991744 0.4834271 0.87570286 prediction 0.554260051983487 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21094307 chr17:21094308 nonsynonymous SNV 0.646 0 22 hm5C_associated_SNPs_104123 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:21094308-21094309
64251 chr16 681374 681374 1 + C A UCEC 681370 + 681350 681390 41 TGCCCCAACCAGCTCAGCCCCAACCTGTGGGTGGACGCCCA TGCCCCAACCAGCTCAGCCCCAACATGTGGGTGGACGCCCA < 41bp 0.381648270833368 0.777121785556635 0.06602934 0.1537435 prediction 0.55424357111327 Functional Gain - WFIKKN1 ENSG00000127578 CDS Human protein_coding chr16:681370 chr16:681374 nonsynonymous SNV 0.990 4 25 hm5C_associated_SNPs_104124 0 0 1 DDX3X POSTAR2 ENCODE chr16:681308-681392
64251 chr15 42114174 42114174 1 + T A LUSC 42114170 + 42114150 42114190 41 GGAATCCTGACAGTGAGTTCCAAGTGCAGGCTCCAGCCCGG GGAATCCTGACAGTGAGTTCCAAGAGCAGGCTCCAGCCCGG < 41bp 0.479599903854442 0.777089006938898 0.22152701 0.3136003 prediction 0.554178013877795 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42114170 chr15:42114174 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_104128 0 0 2 PPIG POSTAR2 ENCODE chr15:42114163-42114206
64251 chr3 196315552 196315552 1 + C A rs145168273 196315548 + 196315528 196315568 41 CCTAAACTGGGACAGGATCTCTAACGGACTCATCTTTGTGC CCTAAACTGGGACAGGATCTCTAAAGGACTCATCTTTGTGC < 41bp 0.541869039379307 0.818956931886172 0.047765613 0.21864522 prediction 0.55417578501373 Functional Gain - FBXO45 ENSG00000174013 UTR3 Human protein_coding chr3:196315548 chr3:196315552 . . 0 25 hm5C_associated_SNPs_104129 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:196315525-196315553
64251 chr2 105858688 105858688 1 + C A PRAD 105858684 + 105858664 105858704 41 TTTGTCCTGGAGGGCGTGGCCATCCTGCTCATCATCAGCGT TTTGTCCTGGAGGGCGTGGCCATCATGCTCATCATCAGCGT < 41bp 0.384364360930898 0.777070617666438 0.18661451 0.20459262 prediction 0.554141235332876 Functional Gain - GPR45 ENSG00000135973 CDS Human protein_coding chr2:105858684 chr2:105858688 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_104133 0 0 1 TNRC6A POSTAR2 GSE21578,GSM545218 chr2:105858680-105858700
64251 chr19 50168913 50168913 1 - G C rs151315907 50168917 - 50168897 50168937 41 AAGACAGGGGTGGGTTCCAGCTGCCCGCACGCCCCGACCTT AAGACAGGGGTGGGTTCCAGCTGCGCGCACGCCCCGACCTT < 41bp 0.492525530976324 0.777070333108856 0.074766815 0.15067169 prediction 0.554140666217711 Functional Gain - BCL2L12;IRF3 ENSG00000126453;ENSG00000126456 UTR5 Human other chr19:50168917 chr19:50168913 . . 0 25 hm5C_associated_SNPs_104134 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50168910-50168934
64251 chr12 19282753 19282753 1 + T G HNSC 19282751 + 19282731 19282771 41 GACATGGCGGCGGATCTGAACCTGGAGTGGATCTCCCTGCC GACATGGCGGCGGATCTGAACCGGGAGTGGATCTCCCTGCC < 41bp 0.453407764636001 0.777059964919356 0.79713786 0.9096582 prediction 0.554119929838711 Functional Gain - PLEKHA5 ENSG00000052126 CDS Human protein_coding chr12:19282751 chr12:19282753 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_104135 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:19282733-19282759
64251 chr9 135930675 135930675 1 + C G rs145199698 135930671 + 135930651 135930691 41 TTCCCACATTCAGGCTCCCGCAAGCCGCTCCACAGCCCTGG TTCCCACATTCAGGCTCCCGCAAGGCGCTCCACAGCCCTGG < 41bp 0.518006735486276 0.795023134575099 0.566676 0.8324714 prediction 0.554032798177647 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135930671 chr9:135930675 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_104142 0 0 2 FASTKD2 POSTAR2 ENCODE chr9:135930654-135930705
64251 chr19 19166101 19166101 1 + C G rs199554736 19166097 + 19166077 19166117 41 CTCGTGAAGCAAGTGCTGAGCACCCTGCGAGCCATCGCAGG CTCGTGAAGCAAGTGCTGAGCACCGTGCGAGCCATCGCAGG < 41bp 0.495864830549316 0.7770009978068 0.049223393 0.15654638 prediction 0.5540019956136 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166097 chr19:19166101 nonsynonymous SNV 0.674 3 25 hm5C_associated_SNPs_104143 0 0 1 SF3A3 POSTAR2 ENCODE chr19:19166030-19166103
64251 chr2 178407946 178407946 1 + C A rs148879448 178407942 + 178407922 178407962 41 TCTTTCTGGATGTTTGCTCACAGGCTCCCTGAGGAGCAGAA TCTTTCTGGATGTTTGCTCACAGGATCCCTGAGGAGCAGAA < 41bp 0.539761445190826 0.81671085427147 0.26112306 0.47349888 prediction 0.553898818161287 Functional Gain - AGPS ENSG00000018510 UTR3 Human protein_coding chr2:178407942 chr2:178407946 . . 0 25 hm5C_associated_SNPs_104149 1 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:178407906-178407952
64251 chr6 168228529 168228529 1 + T G rs6900911 168228526 + 168228506 168228546 41 CGGGGCCGCGAGGAAGGGCCCTCTGCGGCGGCCTCTGCCCG CGGGGCCGCGAGGAAGGGCCCTCGGCGGCGGCCTCTGCCCG < 41bp 0.481764078465768 0.776936064036653 0.47704566 0.7498887 prediction 0.553872128073306 Functional Gain - AFDN ENSG00000130396 intronic Human protein_coding chr6:168228526 chr6:168228529 . . 0 24 hm5C_associated_SNPs_104150 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:168228523-168228551
64251 chr22 50962103 50962103 1 + C G rs200605042 50962099 + 50962079 50962119 41 CACACTGTCTGAGATCTGCTCAGCCGATCTGCTCCGGCCGT CACACTGTCTGAGATCTGCTCAGCGGATCTGCTCCGGCCGT < 41bp 0.494881415246474 0.776912089188538 0.5038174 0.8571264 prediction 0.553824178377077 Functional Gain - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962099 chr22:50962103 synonymous SNV . 0 25 hm5C_associated_SNPs_104153 2 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50962076-50962114
64251 chr1 227954742 227954742 1 + C G rs34209229 227954738 + 227954718 227954758 41 CACAGCACTGCACCTGCAGACAAGCCTGCCAGCCCTTTCTG CACAGCACTGCACCTGCAGACAAGGCTGCCAGCCCTTTCTG < 41bp 0.498330634828437 0.776895225077798 0.2482959 0.79091513 prediction 0.553790450155595 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227954738 chr1:227954742 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_104155 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:227954722-227954764
64251 chr16 69373944 69373944 1 + C G LUSC 69373940 + 69373920 69373960 41 ATCTTCAACTGCTGGTGGACCGGCCCGATGGCACCTACTGT ATCTTCAACTGCTGGTGGACCGGCGCGATGGCACCTACTGT < 41bp 0.520824423929597 0.797710042828076 0.16710836 0.54294896 prediction 0.553771237796959 Functional Gain - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69373940 chr16:69373944 nonsynonymous SNV 0.847 2 25 hm5C_associated_SNPs_104156 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:69373910-69373944
64251 chr1 44443709 44443709 1 + C A rs56842927 44443705 + 44443685 44443725 41 ATGTGTGGGTGGGGCCGTGCCTCACTTTTATTTATTGCTGG ATGTGTGGGTGGGGCCGTGCCTCAATTTTATTTATTGCTGG < 41bp 0.405941071628593 0.776877222335683 0.11501053 0.79804677 prediction 0.553754444671366 Functional Gain - ATP6V0B ENSG00000117410 UTR3 Human protein_coding chr1:44443705 chr1:44443709 . . 0 25 hm5C_associated_SNPs_104157 0 0 39 TARDBP POSTAR2 DRA001158,DRS012386 chr1:44443650-44443875
64251 chr12 124081212 124081212 1 + T A BRCA 124081208 + 124081188 124081228 41 CCTTCTTTGAAGCTCTTGTTCTAGTTGCCATGACATTGGGA CCTTCTTTGAAGCTCTTGTTCTAGATGCCATGACATTGGGA < 41bp 0.555076841374393 0.831949756279509 0.12952492 0.100853354 prediction 0.553745829810232 Functional Gain - TMED2 ENSG00000086598 CDS Human protein_coding chr12:124081208 chr12:124081212 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_104158 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:124081154-124081477
64251 chr7 148484096 148484096 1 + T A GBM 148484092 + 148484072 148484112 41 CTTTGCCAGATGGTTGTCTTCAAGTACATAGAAGACAAAGA CTTTGCCAGATGGTTGTCTTCAAGAACATAGAAGACAAAGA < 41bp 0.464219932081495 0.776859795065562 0.2808712 0.24808979 prediction 0.553719590131124 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148484092 chr7:148484096 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_104161 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148484096-148484122
64251 chr7 148485727 148485727 1 + C A GBM 148485723 + 148485703 148485743 41 GGCGTGAGCAAAGATCTGAACGAGCAATTCAAAAAGCACTT GGCGTGAGCAAAGATCTGAACGAGAAATTCAAAAAGCACTT < 41bp 0.369103447442005 0.77681894592282 0.26663372 0.25612694 prediction 0.553637891845641 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148485723 chr7:148485727 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_104165 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148485693-148485755
64251 chr6 27806651 27806651 1 + T G PRAD 27806649 + 27806629 27806669 41 AACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCGGCGA AACTCCTTCGTCAATGACATCTGCGAGCGCATCGCCGGCGA < 41bp 0.575516506034897 0.852332559586034 0.09344411 0.1217348 prediction 0.553632107102273 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806649 chr6:27806651 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_104167 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:27806620-27806660
64251 chr4 129770210 129770210 1 + C A THCA 129770206 + 129770186 129770226 41 CGTGTCATCAGGCTCTGAGCCTCCCGAGTTGGGCTATGTGG CGTGTCATCAGGCTCTGAGCCTCCAGAGTTGGGCTATGTGG < 41bp 0.3425531467839 0.776809429301871 0.19856235 0.95674324 prediction 0.553618858603741 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129770206 chr4:129770210 synonymous SNV . 0 25 hm5C_associated_SNPs_104169 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:129770200-129770231
64251 chr20 18507054 18507054 1 + T A UCEC 18507050 + 18507030 18507070 41 ACACAGGAGCCAGGATCATGCTGTTTACTGGAGGTCCCCCT ACACAGGAGCCAGGATCATGCTGTATACTGGAGGTCCCCCT < 41bp 0.449590502069028 0.776802375118445 0.13876459 0.20806018 prediction 0.553604750236891 Functional Gain - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18507050 chr20:18507054 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_104170 0 0 1 DDX24 POSTAR2 ENCODE chr20:18507021-18507105
64251 chr19 11135020 11135020 1 + T G STAD 11135018 + 11134998 11135038 41 CCCCTGCAGGTGGAGTACGTCATCAAGTGCGACATGTCTGC CCCCTGCAGGTGGAGTACGTCAGCAAGTGCGACATGTCTGC < 41bp 0.458418332317131 0.776798935697228 0.12779608 0.80219924 prediction 0.553597871394457 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11135018 chr19:11135020 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_104171 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:11135000-11135020
64251 chr5 133481955 133481955 1 + C G rs141612090 133481954 + 133481934 133481974 41 CGGTACTTACCCGGAGAAGGCCGCTGCCCCAGCCCCGTTCC CGGTACTTACCCGGAGAAGGCGGCTGCCCCAGCCCCGTTCC < 41bp 0.482560550708332 0.776793790971931 0.16697294 0.896162 prediction 0.553587581943863 Functional Gain - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133481954 chr5:133481955 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_104172 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:133481917-133481955
64251 chr16 88052077 88052077 1 + C G rs76505268 88052076 + 88052056 88052096 41 GCTGGGCGACGAGAACAACCCCGAGATGCGGGTACGCTGCG GCTGGGCGACGAGAACAACCCGGAGATGCGGGTACGCTGCG < 41bp 0.466051559406307 0.776760176130201 0.52109563 0.93040264 prediction 0.553520352260402 Functional Gain - BANP ENSG00000172530 CDS Human protein_coding chr16:88052076 chr16:88052077 synonymous SNV . 0 22 hm5C_associated_SNPs_104176 0 0 2 PPIG POSTAR2 ENCODE chr16:88052030-88052107
64251 chr19 19606655 19606655 1 + C A UCEC 19606651 + 19606631 19606671 41 CTCGAAGCTGGGGCCACAGGCGAGCTCACAGGTCGTCATGC CTCGAAGCTGGGGCCACAGGCGAGATCACAGGTCGTCATGC < 41bp 0.629511795472127 0.906242567453911 0.9103617 0.89560187 prediction 0.55346154396357 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19606651 chr19:19606655 nonsynonymous SNV 0.506 0 25 hm5C_associated_SNPs_104178 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr19:19606654-19606680
64251 chr11 130011950 130011950 1 + T G LIHC 130011948 + 130011928 130011968 41 AGGAAGAGGCAGTATGGCACCATCAGCCACGGGATCGTGGA AGGAAGAGGCAGTATGGCACCAGCAGCCACGGGATCGTGGA < 41bp 0.581271056105164 0.85799019266871 0.042379826 0.18654165 prediction 0.553438273127092 Functional Gain - APLP2 ENSG00000084234 CDS Human protein_coding chr11:130011948 chr11:130011950 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_104180 0 0 7 GRWD1 POSTAR2 ENCODE chr11:130011936-130011960
64251 chr22 32871363 32871363 1 + C G BLCA 32871359 + 32871339 32871379 41 CCTGGAGAACATGGCCCGGCCTCCCGGGGGCTCTGGTCCCC CCTGGAGAACATGGCCCGGCCTCCGGGGGGCTCTGGTCCCC < 41bp 0.501853613050702 0.778556291164529 0.21782473 0.704597 prediction 0.553405356227654 Functional Gain - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32871359 chr22:32871363 synonymous SNV . 0 25 hm5C_associated_SNPs_104181 0 0 3 DROSHA POSTAR2 ENCODE chr22:32871347-32871399
64251 chr12 132237891 132237891 1 + C G STAD 132237890 + 132237870 132237910 41 GACTAGCAGCGGGGCCACCTCCACAACCACCACCACAAGGT GACTAGCAGCGGGGCCACCTCGACAACCACCACCACAAGGT < 41bp 0.557329239258601 0.833984778790577 0.37992057 0.4049937 prediction 0.553311079063952 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132237890 chr12:132237891 synonymous SNV . 0 22 hm5C_associated_SNPs_104184 0 0 2 RBPMS POSTAR2 SRX484628 chr12:132237880-132237900
64251 chr7 6630031 6630031 1 + C A KIRC 6630027 + 6630007 6630047 41 GCTGCAGAGCGCGCCGCTGCCCATCGTGGACAAGGGCCCCG GCTGCAGAGCGCGCCGCTGCCCATAGTGGACAAGGGCCCCG < 41bp 0.388374404101748 0.776637418855271 0.08854982 0.12143892 prediction 0.553274837710543 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6630027 chr7:6630031 synonymous SNV . 0 25 hm5C_associated_SNPs_104187 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:6630017-6630040
64251 chr16 28847439 28847439 1 + C G LUSC 28847438 + 28847418 28847458 41 CTACCCCTACATCGGACACCCCCAAGGTGAGCAGCCTGGCC CTACCCCTACATCGGACACCCGCAAGGTGAGCAGCCTGGCC < 41bp 0.480631763322727 0.776616017993897 0.16354647 0.20589712 prediction 0.553232035987794 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847438 chr16:28847439 synonymous SNV . 0 22 hm5C_associated_SNPs_104188 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:28847394-28847440
64251 chr9 139564106 139564106 1 + C G rs114826929 139564102 + 139564082 139564122 41 CCGCAGCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGT CCGCAGCCCTGGGCTGGCCCCTGCGAGGCCTCGCTACGCGT < 41bp 0.508407921113284 0.784995340796755 0.1064513 0.29109323 prediction 0.553174839366942 Functional Gain - EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139564102 chr9:139564106 synonymous SNV . 0 25 hm5C_associated_SNPs_104193 0 0 5 DDX55 POSTAR2 ENCODE chr9:139564067-139564111
64251 chr22 31829981 31829981 1 + C G rs115098936 31829977 + 31829957 31829997 41 AAACCTTTCCCTTTTCCCATCTGCCGGACGAACCACAACAG AAACCTTTCCCTTTTCCCATCTGCGGGACGAACCACAACAG < 41bp 0.510738220947282 0.787296392095852 0.17047802 0.265167 prediction 0.55311634229714 Functional Gain - DRG1 ENSG00000185721 UTR3 Human protein_coding chr22:31829977 chr22:31829981 . . 0 25 hm5C_associated_SNPs_104196 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:31829919-31829983
64251 chr11 65154544 65154544 1 + C G LUAD 65154540 + 65154520 65154560 41 GAAGGCAGTGCCGGGCAGCCCGGCCCCGCTGAGCGATCCCA GAAGGCAGTGCCGGGCAGCCCGGCGCCGCTGAGCGATCCCA < 41bp 0.49144549388392 0.776470269550534 0.21079761 0.755086 prediction 0.552940539101068 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65154540 chr11:65154544 nonsynonymous SNV 0.226 2 25 hm5C_associated_SNPs_104200 0 0 8 BUD13 POSTAR2 ENCODE chr11:65154501-65154568
64251 chr2 70131588 70131588 1 + T G rs564137993 70131585 + 70131565 70131605 41 AATCTTATTTATGATATATGCAGTTAACTTACCTTGCCTCA AATCTTATTTATGATATATGCAGGTAACTTACCTTGCCTCA < 41bp 0.432863816820474 0.77645866645001 0.17700315 0.8774749 prediction 0.552917332900021 Functional Gain - SNRNP27 ENSG00000124380 UTR3 Human protein_coding chr2:70131585 chr2:70131588 . . 0 24 hm5C_associated_SNPs_104201 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:70131577-70131609
64251 chr3 196388349 196388349 1 + C G SKCM 196388345 + 196388325 196388365 41 GGGGGGCCCTGCAGCATGGGCAGACGGTGGCCGACTGGGCC GGGGGGCCCTGCAGCATGGGCAGAGGGTGGCCGACTGGGCC < 41bp 0.51528860692528 0.791728916433372 0.7576901 0.883858 prediction 0.552880619016185 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196388345 chr3:196388349 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_104203 0 0 1 SLTM POSTAR2 ENCODE chr3:196388297-196388377
64251 chr12 85677393 85677393 1 + C G HNSC 85677392 + 85677372 85677412 41 AGAAGGACAGCCCCTTCACACCGAACTGAATAGAGCTATGG AGAAGGACAGCCCCTTCACACGGAACTGAATAGAGCTATGG < 41bp 0.548765275462064 0.825201664304141 0.105116725 0.45653883 prediction 0.552872777684153 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85677392 chr12:85677393 synonymous SNV . 0 22 hm5C_associated_SNPs_104204 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:85677388-85677414
64251 chr4 2916685 2916685 1 + C A COAD 2916681 + 2916661 2916701 41 CCACGTCATTGTGAGCACCACGGGCCCCAACCCCTTCACCA CCACGTCATTGTGAGCACCACGGGACCCAACCCCTTCACCA < 41bp 0.405888772514239 0.776429942013903 0.4217744 0.57590336 prediction 0.552859884027807 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2916681 chr4:2916685 synonymous SNV . 0 25 hm5C_associated_SNPs_104205 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr4:2916684-2916709
64251 chr17 8172467 8172467 1 + C A LUSC 8172463 + 8172443 8172483 41 CTGTCATGCCTCACCCTGAGCGGGCCGTTAGGCCTTGGCAG CTGTCATGCCTCACCCTGAGCGGGACGTTAGGCCTTGGCAG < 41bp 0.62036149130633 0.896771820747819 0.77358866 0.8323257 prediction 0.552820658882979 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8172463 chr17:8172467 nonsynonymous SNV 0.973 1 25 hm5C_associated_SNPs_104207 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:8172460-8172508
64251 chr1 156703828 156703828 1 + C A UCEC 156703824 + 156703804 156703844 41 GTCCAAACCAGCCCTCGTCACTCCCCACACCACGTGGTTAG GTCCAAACCAGCCCTCGTCACTCCACACACCACGTGGTTAG < 41bp 0.352946605893675 0.776379266229466 0.12633434 0.9443478 prediction 0.552758532458932 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703824 chr1:156703828 nonsynonymous SNV 0.385 4 25 hm5C_associated_SNPs_104211 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:156703820-156703844
64251 chr19 35775917 35775917 1 + C A UCEC 35775913 + 35775893 35775933 41 TCTGCTGCGGCTGCTGTCATCGATCAAAGTGTGGGATGTGC TCTGCTGCGGCTGCTGTCATCGATAAAAGTGTGGGATGTGC < 41bp 0.386689977225346 0.776331711099925 0.14624473 0.31650776 prediction 0.55266342219985 Functional Gain - HAMP ENSG00000105697 CDS Human protein_coding chr19:35775913 chr19:35775917 stopgain 0.001 0 25 hm5C_associated_SNPs_104216 0 0 4 LARP4 POSTAR2 ENCODE chr19:35775861-35776018
64251 chr9 136320513 136320513 1 + C G COAD 136320512 + 136320492 136320532 41 TCTGCCAGCACTTGCCCAAGCCGGTGACTGTGCGTGGCTGC TCTGCCAGCACTTGCCCAAGCGGGTGACTGTGCGTGGCTGC < 41bp 0.484897971958564 0.776308476743834 0.29829443 0.7795913 prediction 0.552616953487668 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136320512 chr9:136320513 nonsynonymous SNV 0.751 3 22 hm5C_associated_SNPs_104218 0 0 1 PPIG POSTAR2 ENCODE chr9:136320492-136320638
64251 chr20 1108109 1108109 1 + T C GBM 1108107 + 1108087 1108127 41 GTGGCAGACTTGACCCTGAACTTGGATGATTATATCGATGC GTGGCAGACTTGACCCTGAACTCGGATGATTATATCGATGC < 41bp 0.50878418115867 0.78505712499135 0.051392257 0.08347952 prediction 0.55254588766536 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1108107 chr20:1108109 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_104225 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:1108081-1108147
64251 chr17 76200752 76200752 1 + C A UCEC 76200748 + 76200728 76200768 41 TCTCTGCAGTAAGGATGAGTCTGCCTTCATGGTCCACCCGC TCTCTGCAGTAAGGATGAGTCTGCATTCATGGTCCACCCGC < 41bp 0.639915701480315 0.916118490928561 0.13996887 0.5103539 prediction 0.552405578896494 Functional Gain - AFMID ENSG00000183077 CDS Human protein_coding chr17:76200748 chr17:76200752 synonymous SNV . 0 25 hm5C_associated_SNPs_104233 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr17:76200714-76200755
64251 chr10 73990180 73990180 1 + C A UCEC 73990176 + 73990156 73990196 41 TTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAACA TTTAGCTATCAAGTGGCATCCACGATTAAACAGGTGAAACA < 41bp 0.38244322084707 0.776183101601943 0.22735542 0.17516556 prediction 0.552366203203886 Functional Gain - ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73990176 chr10:73990180 nonsynonymous SNV 0.987 3 25 hm5C_associated_SNPs_104234 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:73990159-73990193
64251 chr4 74318261 74318261 1 + T A LUAD 74318257 + 74318237 74318277 41 GGTGGATGAAACATATGTCCCTCCTGCATTCTCTGATGACA GGTGGATGAAACATATGTCCCTCCAGCATTCTCTGATGACA < 41bp 0.437025340973323 0.776152980870367 0.04272619 0.78050315 prediction 0.552305961740733 Functional Gain - AFP ENSG00000081051 CDS Human protein_coding chr4:74318257 chr4:74318261 synonymous SNV . 0 25 hm5C_associated_SNPs_104236 0 0 7 DHX30 POSTAR2 ENCODE chr4:74318186-74318268
64251 chr9 130865985 130865985 1 + C G HNSC 130865981 + 130865961 130866001 41 TCTTTGATGTGGGTGAGAATCTAACGGTCCCGGATGAGTTC TCTTTGATGTGGGTGAGAATCTAAGGGTCCCGGATGAGTTC < 41bp 0.491233808818979 0.776148566468913 0.030295968 0.0911302 prediction 0.552297132937827 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130865981 chr9:130865985 nonsynonymous SNV 0.365 3 25 hm5C_associated_SNPs_104237 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:130865959-130865986
64251 chr10 13684716 13684716 1 + T G rs574331673 13684714 + 13684694 13684734 41 ATTTACATGTAGAAGACTTACGTGAGGGCCCTTTGTCTTTT ATTTACATGTAGAAGACTTACGGGAGGGCCCTTTGTCTTTT < 41bp 0.559778253255735 0.8359258924977 0.34992212 0.90182924 prediction 0.552295278483931 Functional Gain - FRMD4A ENSG00000239665 intronic Human processed_transcript chr10:13684714 chr10:13684716 . . 0 23 hm5C_associated_SNPs_104238 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:13684678-13684725
64251 chr15 51201110 51201110 1 + C A UCEC 51201106 + 51201086 51201126 41 CAGCCTTGTCCGCGGCATCACAGCCCTCACCTCCAAGCACG CAGCCTTGTCCGCGGCATCACAGCACTCACCTCCAAGCACG < 41bp 0.559739755130851 0.835878722473795 0.087890446 0.1473243 prediction 0.552277934685887 Functional Gain - AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51201106 chr15:51201110 synonymous SNV . 0 25 hm5C_associated_SNPs_104240 0 0 1 GRWD1 POSTAR2 ENCODE chr15:51201001-51201129
64251 chr12 121132786 121132786 1 + T G LUAD 121132783 + 121132763 121132803 41 TGTCCACCTTCACAGGGAAACTCTACATTGAGTTTGTCAAG TGTCCACCTTCACAGGGAAACTCGACATTGAGTTTGTCAAG < 41bp 0.403031269511876 0.776129714990824 0.95533544 0.41376197 prediction 0.552259429981648 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121132783 chr12:121132786 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_104242 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:121132756-121132786
64251 chr7 100212803 100212803 1 + C G OV 100212802 + 100212782 100212822 41 CACCATGGTGTTCCTCCGGACCTGAGCTCCGTGCTCAACCC CACCATGGTGTTCCTCCGGACGTGAGCTCCGTGCTCAACCC < 41bp 0.468079111598631 0.776127317319282 0.13069484 0.21191123 prediction 0.552254634638564 Functional Gain - MOSPD3 ENSG00000106330 CDS Human protein_coding chr7:100212802 chr7:100212803 synonymous SNV . 0 22 hm5C_associated_SNPs_104244 0 0 1 IGF2BP2 POSTAR2 ENCODE chr7:100212782-100212855
64251 chr15 41672596 41672596 1 + T G rs58964563 41672594 + 41672574 41672614 41 ATTCTTTGGGATGGTTTTTACTTAAGTCCATTAACAATTCA ATTCTTTGGGATGGTTTTTACTGAAGTCCATTAACAATTCA < 41bp 0.481805703618816 0.776126131547102 0.0745703 0.24906579 prediction 0.552252263094204 Functional Gain - NUSAP1 ENSG00000137804 UTR3 Human protein_coding chr15:41672594 chr15:41672596 . . 0 23 hm5C_associated_SNPs_104245 0 0 16 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:41672551-41672631
64251 chr4 1730215 1730215 1 + C A rs798757 1730211 + 1730191 1730231 41 AAGGAGACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGA AAGGAGACTGGGAGAGAGGTCCGGACTCAAGCCTCCCTTGA < 41bp 0.391039920882103 0.776115456967139 0.8263167 0.7953079 prediction 0.552230913934278 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730211 chr4:1730215 synonymous SNV . 0 25 hm5C_associated_SNPs_104247 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1730200-1730237
64251 chr11 43515925 43515925 1 + T G rs35687112 43515923 + 43515903 43515943 41 GCAACGTTCTGCGCTCTCTCCGTTAGACCTCCATGCTGTCC GCAACGTTCTGCGCTCTCTCCGGTAGACCTCCATGCTGTCC < 41bp 0.458830703177266 0.776071982162649 0.0058605075 0.42413253 prediction 0.552143964325298 Functional Gain - TTC17 ENSG00000052841 UTR3 Human protein_coding chr11:43515923 chr11:43515925 . . 0 23 hm5C_associated_SNPs_104250 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:43515894-43515937
64251 chr3 152553731 152553731 1 + C A UCEC 152553727 + 152553707 152553747 41 AAGACGGGCTTCCAGTTTTACTACCTGCCGGCTGTCTACAT AAGACGGGCTTCCAGTTTTACTACATGCCGGCTGTCTACAT < 41bp 0.361787584685372 0.775982345286503 0.13521767 0.88022125 prediction 0.551964690573005 Functional Gain - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553727 chr3:152553731 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_104257 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:152553720-152553740
64251 chr8 144681540 144681540 1 + C G rs565242910 144681539 + 144681519 144681559 41 GGCTGCCTTCGAGCCCCGGCCCGGCGAGGACAGTGCTGGGC GGCTGCCTTCGAGCCCCGGCCGGGCGAGGACAGTGCTGGGC < 41bp 0.484436906517616 0.775979404548275 0.66216254 0.8919446 prediction 0.55195880909655 Functional Gain - TIGD5 ENSG00000179886 CDS Human protein_coding chr8:144681539 chr8:144681540 synonymous SNV . 0 22 hm5C_associated_SNPs_104259 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:144681520-144681540
64251 chr17 60526013 60526013 1 + C G rs528434306 60526012 + 60525992 60526032 41 GATCGCCGACTGCAGGTGAACCGAGGAAAGCAACTGACAAT GATCGCCGACTGCAGGTGAACGGAGGAAAGCAACTGACAAT < 41bp 0.52932468693544 0.80527131704845 0.89179003 0.8996546 prediction 0.551893260226019 Functional Gain - METTL2A ENSG00000087995 CDS Human protein_coding chr17:60526012 chr17:60526013 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_104263 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:60525971-60526019
64251 chr19 14034176 14034176 1 + T A UCEC 14034172 + 14034152 14034192 41 CCTGCCCCTGTCAACAAGGACGACTTTGCCCTGGTCCAGCG CCTGCCCCTGTCAACAAGGACGACATTGCCCTGGTCCAGCG < 41bp 0.459330262481053 0.775934236184095 0.043626666 0.099674284 prediction 0.55186847236819 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14034172 chr19:14034176 nonsynonymous SNV 0.957 2 25 hm5C_associated_SNPs_104265 0 0 4 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:14034176-14034177
64251 chr19 4497986 4497986 1 + T G UCEC 4497983 + 4497963 4498003 41 AGGTGGAGCGGACCCGGAAGCGGTCCGAGGGCTTCTCGATG AGGTGGAGCGGACCCGGAAGCGGGCCGAGGGCTTCTCGATG < 41bp 0.384702249168468 0.77587830839768 0.3714679 0.90998375 prediction 0.551756616795361 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4497983 chr19:4497986 nonsynonymous SNV 0.870 0 24 hm5C_associated_SNPs_104271 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:4497979-4498004
64251 chr4 57340534 57340534 1 + T C STAD 57340532 + 57340512 57340552 41 CAAGGCCAGCTGAACCAGGCCATGAAAATCCTACAAAAAGC CAAGGCCAGCTGAACCAGGCCACGAAAATCCTACAAAAAGC < 41bp 0.502194679638178 0.777986844649626 0.01717621 0.0066018105 prediction 0.551584330022896 Functional Gain - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57340532 chr4:57340534 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_104275 0 0 4 GRWD1 POSTAR2 ENCODE chr4:57340494-57340538
64251 chr1 151006539 151006539 1 + C A rs3738476 151006535 + 151006515 151006555 41 GGCAAGTAACTCCCTGATTTCTGGCCTGAGTCAAGATGAGG GGCAAGTAACTCCCTGATTTCTGGACTGAGTCAAGATGAGG < 41bp 0.622091903832911 0.897871661961573 0.12662438 0.1589166 prediction 0.551559516257324 Functional Gain - PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006535 chr1:151006539 synonymous SNV . 0 25 hm5C_associated_SNPs_104277 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:151006520-151006540
64251 chrX 38546900 38546900 1 + C A LUSC 38546896 + 38546876 38546916 41 CTGTCTGTCCCGGTTCATCACGGCCAATCAGTATGAGATGG CTGTCTGTCCCGGTTCATCACGGCAAATCAGTATGAGATGG < 41bp 0.640053801667103 0.915820513026313 0.5244485 0.4968378 prediction 0.55153342271842 Functional Gain - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38546896 chrX:38546900 synonymous SNV . 0 25 hm5C_associated_SNPs_104280 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chrX:38546855-38546918
64251 chr4 42403085 42403085 1 + C G HNSC 42403084 + 42403064 42403104 41 ATCTTCATTGCGTTCATCATCCTGGGCTCTGTAGTGGCTAT ATCTTCATTGCGTTCATCATCGTGGGCTCTGTAGTGGCTAT < 41bp 0.478023116507522 0.775745816193466 0.784516 0.9251313 prediction 0.551491632386933 Functional Gain - SHISA3 ENSG00000178343 CDS Human protein_coding chr4:42403084 chr4:42403085 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_104284 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:42403078-42403102
64251 chr11 63994380 63994380 1 + T G LUSC 63994378 + 63994358 63994398 41 GCTCCTGCGCCTGGGCCTTACTTCCTACCGAGACTTCCTGG GCTCCTGCGCCTGGGCCTTACTGCCTACCGAGACTTCCTGG < 41bp 0.438345930107649 0.775660706059666 0.14395869 0.19231954 prediction 0.551321412119331 Functional Gain - NUDT22 ENSG00000149761 CDS Human protein_coding chr11:63994378 chr11:63994380 nonsynonymous SNV 0.938 1 23 hm5C_associated_SNPs_104292 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:63994358-63994407
64251 chr15 85438181 85438181 1 + C G rs144931395 85438177 + 85438157 85438197 41 GTCTCATCCCCCAGGGCTCTCTGCCTTCCTGCTGGTGGCCT GTCTCATCCCCCAGGGCTCTCTGCGTTCCTGCTGGTGGCCT < 41bp 0.482061549489811 0.775659054294979 0.114307016 0.28920847 prediction 0.551318108589958 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85438177 chr15:85438181 synonymous SNV . 0 25 hm5C_associated_SNPs_104293 0 0 2 BUD13 POSTAR2 ENCODE chr15:85438137-85438216
64251 chr7 150069548 150069548 1 + C G rs187957325 150069547 + 150069527 150069567 41 GGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCG GGAGCGGCCCTTCACCTGCGCGGAGTGCGGGAAGAACTTCG < 41bp 0.534378953968018 0.810005455915422 0.34013134 0.7696005 prediction 0.551253003894808 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069547 chr7:150069548 synonymous SNV . 0 22 hm5C_associated_SNPs_104295 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr7:150069539-150069570
64251 chr10 133983465 133983465 1 + C A rs114707888 133983461 + 133983441 133983481 41 GTGGTGGACGAGGCGGCGTCCTCGCGGGGTCGGGACCTGGG GTGGTGGACGAGGCGGCGTCCTCGAGGGGTCGGGACCTGGG < 41bp 0.419877658277877 0.775614872049804 0.30271745 0.4299128 prediction 0.551229744099607 Functional Gain - JAKMIP3 ENSG00000188385 UTR3 Human protein_coding chr10:133983461 chr10:133983465 . . 0 25 hm5C_associated_SNPs_104296 0 0 1 DGCR8 POSTAR2 ENCODE chr10:133983458-133983466
64251 chr2 96933131 96933131 1 + C G OV 96933130 + 96933110 96933150 41 TGCGGAAGGTAGCCTGGTCCCCCTGCGGTAATTACCTGGCC TGCGGAAGGTAGCCTGGTCCCGCTGCGGTAATTACCTGGCC < 41bp 0.472337592945242 0.775613678330145 0.23726064 0.5802404 prediction 0.55122735666029 Functional Gain - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96933130 chr2:96933131 nonsynonymous SNV 0.948 4 22 hm5C_associated_SNPs_104297 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:96933100-96933137
64251 chrX 140995303 140995303 1 + C A STAD 140995299 + 140995279 140995319 41 AGTCCTCTTGAGGGAGAGGACTCCCTGTCTTCTCTCCATTT AGTCCTCTTGAGGGAGAGGACTCCATGTCTTCTCTCCATTT < 41bp 0.365813960768178 0.775598134635229 0.029377252 0.941826 prediction 0.551196269270459 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995299 chrX:140995303 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_104300 0 0 1 PTBP1 POSTAR2 ENCODE chrX:140995299-140995416
64251 chr20 61461738 61461738 1 + C G rs557569181 61461737 + 61461717 61461757 41 CCTCGGCCCACAAGGCCCTCCCGGAGCCCCTGGTGTCCGAG CCTCGGCCCACAAGGCCCTCCGGGAGCCCCTGGTGTCCGAG < 41bp 0.559755372727275 0.835342047338147 0.92136025 0.9243486 prediction 0.551173349221744 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61461737 chr20:61461738 synonymous SNV . 0 22 hm5C_associated_SNPs_104301 0 0 3 PPIG POSTAR2 ENCODE chr20:61461727-61461747
64251 chr20 307691 307691 1 + C A rs531229417 307687 + 307667 307707 41 ATGCCCCTCCCCCGCAGACACACCCCAAGGCAGCCCAACCC ATGCCCCTCCCCCGCAGACACACCACAAGGCAGCCCAACCC < 41bp 0.398805018850089 0.775530481081755 0.005481869 0.032534868 prediction 0.551060962163509 Functional Gain - SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307687 chr20:307691 . . 0 25 hm5C_associated_SNPs_104309 0 0 4 CSTF2T POSTAR2 ENCODE chr20:307665-307761
64251 chr4 52943089 52943089 1 + C A HNSC 52943085 + 52943065 52943105 41 GTCCAATGTGGCGCGCAAGGCTGCCCTCTTGTCCCGGTTCA GTCCAATGTGGCGCGCAAGGCTGCACTCTTGTCCCGGTTCA < 41bp 0.645727202026627 0.921255158593434 0.10618812 0.24094582 prediction 0.551055913133614 Functional Gain - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52943085 chr4:52943089 synonymous SNV . 0 25 hm5C_associated_SNPs_104310 0 0 1 GRWD1 POSTAR2 ENCODE chr4:52943079-52943249
64251 chr7 30634661 30634661 1 + C A rs1049402 30634657 + 30634637 30634677 41 CGGTCCCTCAGCGCGGCCTCCTGCCCCCCGATCTCCTTGCC CGGTCCCTCAGCGCGGCCTCCTGCACCCCGATCTCCTTGCC < 41bp 0.628048206205945 0.903571338678933 0.46837783 0.26266056 prediction 0.551046264945975 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30634657 chr7:30634661 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_104311 0 0 7 UPF1 POSTAR2 GSE69586,GSM1704214 chr7:30634650-30634671
64251 chr16 89631176 89631176 1 + T G rs553927482 89631174 + 89631154 89631194 41 CAACCTGGCTGAAGACTGGCCGTGGGGGGTGCAGGGGTCTC CAACCTGGCTGAAGACTGGCCGGGGGGGGTGCAGGGGTCTC < 41bp 0.562883056007692 0.838401824924785 0.5219248 0.9095522 prediction 0.551037537834186 Functional Gain - RPL13 ENSG00000167526 downstream Human protein_coding chr16:89631174 chr16:89631176 . . 0 23 hm5C_associated_SNPs_104312 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:89631167-89631192
64251 chr6 155578056 155578056 1 - A C GBM 155578059 - 155578039 155578079 41 TCTTGGTGCTGTTGGCTTTTCGTTTAATGGGGCAGAAGTGC TCTTGGTGCTGTTGGCTTTTCGTGTAATGGGGCAGAAGTGC < 41bp 0.414962115198746 0.775499962409429 0.20356432 0.35177886 prediction 0.550999924818858 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155578059 chr6:155578056 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_104313 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:155578039-155578077
64251 chr17 18140250 18140250 1 + C G COAD 18140246 + 18140226 18140266 41 GATGGTGGTGGCTGGCACTGCAGGCCAGGTAGGGCTGGGTG GATGGTGGTGGCTGGCACTGCAGGGCAGGTAGGGCTGGGTG < 41bp 0.491055893768079 0.775457495144725 0.7216588 0.8617784 prediction 0.55091499028945 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18140246 chr17:18140250 synonymous SNV . 0 25 hm5C_associated_SNPs_104320 0 0 1 PRPF8 POSTAR2 ENCODE chr17:18140250-18140296
64251 chr2 191745582 191745582 1 + C A rs537934249 191745578 + 191745558 191745598 41 TTAGGCGGAGCGAAGAGAACCGGTCGCGGCAATCCTAGCGC TTAGGCGGAGCGAAGAGAACCGGTAGCGGCAATCCTAGCGC < 41bp 0.582430399977549 0.857862072862691 0.7629529 0.8003741 prediction 0.550863345770284 Functional Gain - GLS ENSG00000235852 ncRNA_exonic Human antisense chr2:191745578 chr2:191745582 . . 0 25 hm5C_associated_SNPs_104323 0 0 5 DGCR8 POSTAR2 ENCODE chr2:191745560-191745603
64251 chr20 49575877 49575877 1 + C G MESO 49575873 + 49575853 49575893 41 TCAGGCCCTTACGCCAGCCACTGCCCTAGACCTGGTCCGCC TCAGGCCCTTACGCCAGCCACTGCGCTAGACCTGGTCCGCC < 41bp 0.496098534317362 0.775418819339903 0.2744636 0.40233827 prediction 0.550837638679806 Functional Gain - MOCS3 ENSG00000124217 CDS Human protein_coding chr20:49575873 chr20:49575877 synonymous SNV . 0 25 hm5C_associated_SNPs_104325 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:49575857-49575881
64251 chr19 30314969 30314969 1 + C G rs118142197 30314968 + 30314948 30314988 41 CTACTTGACCTAAGGGACTCCCACAACAACAAAAGCTTGAA CTACTTGACCTAAGGGACTCCGACAACAACAAAAGCTTGAA < 41bp 0.491800986903546 0.775407252101467 0.3028159 0.5842488 prediction 0.550814504202935 Functional Gain - CCNE1 ENSG00000105173 UTR3 Human protein_coding chr19:30314968 chr19:30314969 . . 0 22 hm5C_associated_SNPs_104326 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:30314938-30314971
64251 chr19 50902659 50902659 1 + C G rs2228665 50902655 + 50902635 50902675 41 CCCACCATCAGCCATAGATCCTCGCTGGCTTCGGCCCACAC CCCACCATCAGCCATAGATCCTCGGTGGCTTCGGCCCACAC < 41bp 0.496671095537893 0.775379468148798 0.709865 0.8717084 prediction 0.550758936297596 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50902655 chr19:50902659 synonymous SNV . 0 25 hm5C_associated_SNPs_104327 2 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:50902645-50902659
64251 chr19 45411116 45411116 1 + T G LGG 45411113 + 45411093 45411133 41 CGGCCAGCGCTGGGAACTGGCACTGGGTCGCTTTTGGGATT CGGCCAGCGCTGGGAACTGGCACGGGGTCGCTTTTGGGATT < 41bp 0.629809040419263 0.905172592161272 0.34980902 0.9200759 prediction 0.550727103484018 Functional Gain - APOE ENSG00000130203 CDS Human protein_coding chr19:45411113 chr19:45411116 nonsynonymous SNV 0.008 2 24 hm5C_associated_SNPs_104330 0 0 3 DDX3X POSTAR2 ENCODE chr19:45411028-45411117
64251 chr15 90808992 90808992 1 + C A rs375518801 90808988 + 90808968 90809008 41 GCTGGGCGGGCGCGTTTGCGCCGCCGTCACTCGCTGTGGGT GCTGGGCGGGCGCGTTTGCGCCGCAGTCACTCGCTGTGGGT < 41bp 0.602948061624471 0.878264455101688 0.7417786 0.80017483 prediction 0.550632786954434 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90808988 chr15:90808992 synonymous SNV . 0 25 hm5C_associated_SNPs_104335 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:90808960-90809020
64251 chr17 33318105 33318105 1 + C G BRCA 33318104 + 33318084 33318124 41 GTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGAC GTCGCATTTTTAACTGCAACCGAGATGATATGGCACGGGAC < 41bp 0.55619246228539 0.831480086150686 0.30000824 0.48115075 prediction 0.550575247730593 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33318104 chr17:33318105 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_104336 0 0 1 YBX3 POSTAR2 ENCODE chr17:33318061-33318132
64251 chr5 41918809 41918809 1 + C G rs188633883 41918808 + 41918788 41918828 41 GGTGGCCTCTCTCCCATTTCCCGCTGTGGCTGAGCCAAACT GGTGGCCTCTCTCCCATTTCCGGCTGTGGCTGAGCCAAACT < 41bp 0.514687944189506 0.789953284072259 0.062247604 0.80166364 prediction 0.550530679765506 Functional Gain - C5orf51 ENSG00000205765 UTR3 Human protein_coding chr5:41918808 chr5:41918809 . 0.024 0 22 hm5C_associated_SNPs_104338 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:41918779-41918828
64251 chr16 29708604 29708604 1 + C A UCEC 29708600 + 29708580 29708620 41 AGTGGGGGCATCACCCTGGACAACCTCCCCCAGTTCTGCGG AGTGGGGGCATCACCCTGGACAACATCCCCCAGTTCTGCGG < 41bp 0.369620709578258 0.775250977296744 0.045087993 0.034889013 prediction 0.550501954593487 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29708600 chr16:29708604 nonsynonymous SNV 0.589 2 25 hm5C_associated_SNPs_104340 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr16:29708588-29708654
64251 chr1 206626692 206626692 1 + C A UCEC 206626688 + 206626668 206626708 41 GGCCGGCACAATGGCATCGACGGACTCATCCCCCATCAGTA GGCCGGCACAATGGCATCGACGGAATCATCCCCCATCAGTA < 41bp 0.36852603679328 0.77524032429469 0.44827816 0.48788932 prediction 0.550480648589379 Functional Gain - SRGAP2 ENSG00000163486 CDS Human other chr1:206626688 chr1:206626692 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_104342 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:206626677-206626694
64251 chr19 49459546 49459546 1 + C G LUAD 49459545 + 49459525 49459565 41 GACGGCAACTTCAACTGGGGCCGGGTTGTCGCCCTTTTCTA GACGGCAACTTCAACTGGGGCGGGGTTGTCGCCCTTTTCTA < 41bp 0.54669163485831 0.821903495876033 0.3496617 0.88724184 prediction 0.550423722035446 Functional Gain - BAX ENSG00000087088 CDS Human protein_coding chr19:49459545 chr19:49459546 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_104344 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49459451-49459546
64251 chr5 131630460 131630460 1 + C G HNSC 131630456 + 131630436 131630476 41 GCGGGGACCCCGGAGCACCGCTGTCGAGTGCCGGACGCCGC GCGGGGACCCCGGAGCACCGCTGTGGAGTGCCGGACGCCGC < 41bp 0.509977072355797 0.785182527805917 0.0655185 0.1251624 prediction 0.550410910900241 Functional Gain - SLC22A4 ENSG00000197208 CDS Human protein_coding chr5:131630456 chr5:131630460 nonsynonymous SNV 0.193 1 25 hm5C_associated_SNPs_104345 0 0 1 RBM15 POSTAR2 ENCODE chr5:131630427-131630476
64251 chr1 173794434 173794434 1 + C A UCEC 173794430 + 173794410 173794450 41 TCCAGACCCATCAGAAGGACCACCCAACCGATCTGGGGTTC TCCAGACCCATCAGAAGGACCACCAAACCGATCTGGGGTTC < 41bp 0.370736496237529 0.775203140248922 0.26562914 0.39697048 prediction 0.550406280497843 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173794430 chr1:173794434 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_104347 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:173794420-173794440
64251 chr20 60868864 60868864 1 + C G UVM 60868863 + 60868843 60868883 41 GGTTCTACCCAGGCAATAACCCCTACACTGGGACCCCCGAC GGTTCTACCCAGGCAATAACCGCTACACTGGGACCCCCGAC < 41bp 0.473496956726898 0.775171138319785 0.24887484 0.28569555 prediction 0.55034227663957 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60868863 chr20:60868864 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_104351 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:60868855-60868881
64251 chr16 89221923 89221923 1 + C G rs187126304 89221922 + 89221902 89221942 41 TTCCAGGACTGGTGGGTGCCCCAGTCCACGGCCCTGCCCCA TTCCAGGACTGGTGGGTGCCCGAGTCCACGGCCCTGCCCCA < 41bp 0.490966160386694 0.775122872877436 0.6549784 0.78970397 prediction 0.550245745754873 Functional Gain - ACSF3 ENSG00000176715 UTR3 Human protein_coding chr16:89221922 chr16:89221923 . . 0 22 hm5C_associated_SNPs_104360 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:89221905-89221929
64251 chr6 33380552 33380552 1 + T A LAML 33380548 + 33380528 33380568 41 GTCCCTGGGAACCGGCTGGTCAGCTGTGAGAAGTGTCGCCA GTCCCTGGGAACCGGCTGGTCAGCAGTGAGAAGTGTCGCCA < 41bp 0.543429189516441 0.818545964959077 0.433567 0.17647779 prediction 0.550233550885273 Functional Gain - PHF1 ENSG00000112511 CDS Human protein_coding chr6:33380548 chr6:33380552 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_104361 0 0 3 GRWD1 POSTAR2 ENCODE chr6:33380474-33380561
64251 chr10 20290841 20290841 1 + C A BLCA 20290837 + 20290817 20290857 41 GACACGAACCGAGCAAGCGTCGGCCAAGACTCTCCTGAGCC GACACGAACCGAGCAAGCGTCGGCAAAGACTCTCCTGAGCC < 41bp 0.37995729662599 0.775052144732998 0.54418963 0.48982194 prediction 0.550104289465996 Functional Gain - PLXDC2 ENSG00000120594 CDS Human protein_coding chr10:20290837 chr10:20290841 nonsynonymous SNV 0.069 1 25 hm5C_associated_SNPs_104372 0 0 3 BUD13 POSTAR2 ENCODE chr10:20290807-20290929
64251 chr4 159092037 159092037 1 - G C SKCM 159092038 - 159092018 159092058 41 GGGAAGCTGATGCTGTAGCACCTGGGTACGCTCAGGGAGCA GGGAAGCTGATGCTGTAGCACGTGGGTACGCTCAGGGAGCA < 41bp 0.466744817690663 0.775023076360073 0.26932532 0.68747807 prediction 0.550046152720146 Functional Gain - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092038 chr4:159092037 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_104374 0 0 1 SND1 POSTAR2 ENCODE chr4:159092007-159092058
64251 chr19 34297866 34297866 1 + T C STAD 34297864 + 34297844 34297884 41 GGGGAGATTTTCCGCTACGTCCTGAGCTTCCTGCGGACGTC GGGGAGATTTTCCGCTACGTCCCGAGCTTCCTGCGGACGTC < 41bp 0.514167175461494 0.789179813006423 0.13651195 0.17822826 prediction 0.550025275089859 Functional Gain - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34297864 chr19:34297866 nonsynonymous SNV 0.996 5 23 hm5C_associated_SNPs_104376 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr19:34297783-34297898
64251 chr19 39866417 39866417 1 + C G LUSC 39866413 + 39866393 39866433 41 GGCCCGGGCTGCTTTTACCACGCCCGATCACGCACCTCTCT GGCCCGGGCTGCTTTTACCACGCCGGATCACGCACCTCTCT < 41bp 0.519897718966061 0.794876011308874 0.35970995 0.77030826 prediction 0.549956584685626 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39866413 chr19:39866417 synonymous SNV . 0 25 hm5C_associated_SNPs_104382 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39866386-39866441
64251 chr19 39908646 39908646 1 + C G GBM 39908645 + 39908625 39908665 41 AGGAGGCGGAGGGGGTGGCCCCCGGCTACGAGGGGGTGAGC AGGAGGCGGAGGGGGTGGCCCGCGGCTACGAGGGGGTGAGC < 41bp 0.564244240560624 0.839205123729992 0.8583324 0.9078982 prediction 0.549921766338737 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39908645 chr19:39908646 synonymous SNV . 0 22 hm5C_associated_SNPs_104384 0 0 3 BUD13 POSTAR2 ENCODE chr19:39908615-39908704
64251 chr11 47587243 47587243 1 + C G rs143766862 47587242 + 47587222 47587262 41 CTACCCGACGCTGCTCTACACCCTGTTCCGCGGGAAGGTGC CTACCCGACGCTGCTCTACACGCTGTTCCGCGGGAAGGTGC < 41bp 0.527808252623476 0.802763400563932 0.0077039897 0.108878314 prediction 0.54991029588091 Functional Gain - PTPMT1 ENSG00000110536 CDS Human protein_coding chr11:47587242 chr11:47587243 synonymous SNV . 0 22 hm5C_associated_SNPs_104385 0 0 12 METTL3 POSTAR2 GSE46705,GSM1135013 chr11:47587216-47587245
64251 chr1 55518431 55518431 1 + C G HNSC 55518427 + 55518407 55518447 41 CGCAGCCTGCGCGTGCTCAACTGCCAAGGGAAGGGCACGGT CGCAGCCTGCGCGTGCTCAACTGCGAAGGGAAGGGCACGGT < 41bp 0.516215314055759 0.791156566120698 0.22953334 0.3804626 prediction 0.549882504129878 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518427 chr1:55518431 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_104387 0 0 2 RPS3 POSTAR2 ENCODE chr1:55518363-55518437
64251 chr14 21167642 21167642 1 + C G rs143247343 21167638 + 21167618 21167658 41 GATGGCATGTACCAGCGATTCCTGCGGCAACACGTGCACCC GATGGCATGTACCAGCGATTCCTGGGGCAACACGTGCACCC < 41bp 0.491835691516563 0.774941054192462 0.3416435 0.78029823 prediction 0.549882108384924 Functional Gain - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167638 chr14:21167642 nonsynonymous SNV 0.789 2 25 hm5C_associated_SNPs_104388 0 0 5 DDX3X POSTAR2 ENCODE chr14:21167642-21167657
64251 chr2 162279937 162279937 1 + C A LIHC 162279933 + 162279913 162279953 41 CCCCTCGCCCAACGACTCGCCGCGCTCGCAGATCGTGCCCG CCCCTCGCCCAACGACTCGCCGCGATCGCAGATCGTGCCCG < 41bp 0.63668193020287 0.911578936039877 0.054678977 0.09982711 prediction 0.549794011674014 Functional Gain - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162279933 chr2:162279937 synonymous SNV . 0 25 hm5C_associated_SNPs_104391 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:162279896-162279939
64251 chr1 169765069 169765069 1 + T G rs578208754 169765067 + 169765047 169765087 41 TCGTCCGGGTGCAGCACATTCTTGATTGGTCTCATGCCTTT TCGTCCGGGTGCAGCACATTCTGGATTGGTCTCATGCCTTT < 41bp 0.543015114090797 0.817897191998924 0.23967564 0.46937904 prediction 0.549764155816255 Functional Gain - C1orf112 ENSG00000000460 UTR5 Human protein_coding chr1:169765067 chr1:169765069 . . 0 23 hm5C_associated_SNPs_104393 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:169765043-169765075
64251 chr17 21030299 21030299 1 + T A rs78159258 21030295 + 21030275 21030315 41 TTGATTGACTATGGTCTCTCCGGCTACCAGGTAGGGGCTGG TTGATTGACTATGGTCTCTCCGGCAACCAGGTAGGGGCTGG < 41bp 0.544690340829728 0.819557862780775 0.66983885 0.49413514 prediction 0.549735043902092 Functional Gain - DHRS7B ENSG00000109016 CDS Human protein_coding chr17:21030295 chr17:21030299 synonymous SNV . 0 25 hm5C_associated_SNPs_104394 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:21030281-21030304
64251 chr4 52780188 52780188 1 + T G rs17082071 52780186 + 52780166 52780206 41 AAACAAGAGAAAACTGTTACCATGAACAAACATTGCCAGAA AAACAAGAGAAAACTGTTACCAGGAACAAACATTGCCAGAA < 41bp 0.542747320188811 0.817602442750953 0.18950462 0.89620423 prediction 0.549710245124283 Functional Gain - DCUN1D4 ENSG00000109184 UTR3 Human protein_coding chr4:52780186 chr4:52780188 . . 0 23 hm5C_associated_SNPs_104395 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:52780101-52780191
64251 chr9 103348604 103348604 1 + C G rs546031058 103348603 + 103348583 103348623 41 TGAACCAGAACACGAGGCAGCCAGGCCGGTGTATCCTCCCC TGAACCAGAACACGAGGCAGCGAGGCCGGTGTATCCTCCCC < 41bp 0.54726878632 0.822115136797186 0.37313062 0.66777927 prediction 0.549692700954373 Functional Gain - CAVIN4 ENSG00000170681 CDS Human protein_coding chr9:103348603 chr9:103348604 synonymous SNV . 0 22 hm5C_associated_SNPs_104396 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:103348596-103348626
64251 chr5 1801556 1801556 1 + C A rs376509886 1801552 + 1801532 1801572 41 ATGGCGGCGGCGATGACCTTCTGCCGGCTGCTGAACCGGTG ATGGCGGCGGCGATGACCTTCTGCAGGCTGCTGAACCGGTG < 41bp 0.616469442324879 0.891296015791097 0.25062904 0.31972367 prediction 0.549653146932435 Functional Gain - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1801552 chr5:1801556 synonymous SNV . 0 25 hm5C_associated_SNPs_104399 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:1801530-1801585
64251 chr7 64863433 64863433 1 + T G UCEC 64863430 + 64863410 64863450 41 GAGGTTATAATGGACTTAACCAGTGTTTGACAACTACTGAC GAGGTTATAATGGACTTAACCAGGGTTTGACAACTACTGAC < 41bp 0.604350764698607 0.879157031153921 0.13327196 0.9109565 prediction 0.549612532910628 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64863430 chr7:64863433 nonsynonymous SNV 0.034 1 24 hm5C_associated_SNPs_104402 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:64863419-64863455
64251 chr6 26217433 26217433 1 + C G rs529624501 26217432 + 26217412 26217452 41 GGCTCGCGACAATAAGAAGACCCGCATCATCCCGCGCCACC GGCTCGCGACAATAAGAAGACGCGCATCATCCCGCGCCACC < 41bp 0.477006752645869 0.774801474988418 0.18846947 0.25955373 prediction 0.549602949976837 Functional Gain - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217432 chr6:26217433 synonymous SNV . 0 22 hm5C_associated_SNPs_104403 0 0 2 TRA2A POSTAR2 ENCODE chr6:26217433-26217476
64251 chr16 69974448 69974448 1 + C A rs3748388 69974444 + 69974424 69974464 41 CCGGCCAGTTAATTCATTCTCAGCCAATGAAGGTTTGTCTA CCGGCCAGTTAATTCATTCTCAGCAAATGAAGGTTTGTCTA < 41bp 0.387968525132689 0.774790275707716 0.35097677 0.43085122 prediction 0.549580551415432 Functional Gain - WWP2 ENSG00000198373 UTR3 Human protein_coding chr16:69974444 chr16:69974448 . . 0 25 hm5C_associated_SNPs_104405 0 0 1 UPF1 POSTAR2 ENCODE chr16:69974447-69974493
64251 chr2 28627176 28627176 1 + T G SKCM 28627174 + 28627154 28627194 41 ATGGCCCTCCCAAGACCTGGCGTGATCAAGACCATTGGCAC ATGGCCCTCCCAAGACCTGGCGGGATCAAGACCATTGGCAC < 41bp 0.59944464602172 0.874232952851917 0.33624768 0.87971985 prediction 0.549576613660393 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28627174 chr2:28627176 nonsynonymous SNV 0.915 3 23 hm5C_associated_SNPs_104406 0 0 2 BUD13 POSTAR2 ENCODE chr2:28627170-28627251
64251 chr3 142841004 142841004 1 + C G LUSC 142841003 + 142840983 142841023 41 TTGTGGGACTGTTGGTGAGCCCCGAAATGGAGCAGTTTGCC TTGTGGGACTGTTGGTGAGCCGCGAAATGGAGCAGTTTGCC < 41bp 0.550253765281293 0.825026363562761 0.06423378 0.6668003 prediction 0.549545196562938 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142841003 chr3:142841004 nonsynonymous SNV 0.983 3 22 hm5C_associated_SNPs_104409 0 0 1 LIN28B POSTAR2 ENCODE chr3:142840968-142841051
64251 chr8 30032679 30032679 1 + T A SKCM 30032675 + 30032655 30032695 41 TAGTGATTGGCGAAGGGAACCTAATAGAAGAACAGGCCCTT TAGTGATTGGCGAAGGGAACCTAAAAGAAGAACAGGCCCTT < 41bp 0.462796446712968 0.774736797823518 0.1980288 0.39288312 prediction 0.549473595647036 Functional Gain - DCTN6 ENSG00000104671 CDS Human protein_coding chr8:30032675 chr8:30032679 nonsynonymous SNV 0.989 3 25 hm5C_associated_SNPs_104417 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:30032657-30032681
64251 chr3 49569285 49569285 1 + C A COAD 49569281 + 49569261 49569301 41 TGACTCCACCACCACCACGACTCGCAGGCCAACCAAGAAAC TGACTCCACCACCACCACGACTCGAAGGCCAACCAAGAAAC < 41bp 0.359601978120434 0.774734983465989 0.11194238 0.3902201 prediction 0.549469966931979 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569281 chr3:49569285 synonymous SNV . 0 25 hm5C_associated_SNPs_104418 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:49569280-49569300
64251 chr8 9577998 9577998 1 + T A KIRC 9577994 + 9577974 9578014 41 GGCTCTGACCCCTCCATCATCTCCTTACAAGGCTTCACAGC GGCTCTGACCCCTCCATCATCTCCATACAAGGCTTCACAGC < 41bp 0.416781183887723 0.774638394925971 0.24682233 0.96997607 prediction 0.549276789851942 Functional Gain - TNKS ENSG00000173273 CDS Human protein_coding chr8:9577994 chr8:9577998 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_104427 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:9577980-9578002
64251 chr19 33077128 33077128 1 + T G rs75083136 33077125 + 33077105 33077145 41 AACACCAATTAAAATACTACCAGTGTAAGTAGAAGGTGTGT AACACCAATTAAAATACTACCAGGGTAAGTAGAAGGTGTGT < 41bp 0.604886209420477 0.87952382783136 0.16742459 0.8954834 prediction 0.549275236821766 Functional Gain - PDCD5 ENSG00000105185 UTR3 Human protein_coding chr19:33077125 chr19:33077128 . . 0 24 hm5C_associated_SNPs_104428 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr19:33077099-33077133
64251 chr20 1099523 1099523 1 + T G rs1803415 1099521 + 1099501 1099541 41 GAAGTGGTGACACACGGTTACTTCGGCTTGGGTGTCGGTGA GAAGTGGTGACACACGGTTACTGCGGCTTGGGTGTCGGTGA < 41bp 0.436483091868581 0.774628655789892 0.6990649 0.7752503 prediction 0.549257311579784 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1099521 chr20:1099523 nonsynonymous SNV 0.165 0 23 hm5C_associated_SNPs_104429 0 0 4 LIN28A POSTAR2 GSE39873,GSM980594 chr20:1099512-1099533
64251 chr10 105037187 105037187 1 + C A rs189225017 105037183 + 105037163 105037203 41 CTATCGCCGGCCGCCGGCGTCCGACGGGCTGGACCTGAGCC CTATCGCCGGCCGCCGGCGTCCGAAGGGCTGGACCTGAGCC < 41bp 0.619005578432043 0.893628290271041 0.6600812 0.75662774 prediction 0.549245423677997 Functional Gain - INA ENSG00000148798 CDS Human protein_coding chr10:105037183 chr10:105037187 nonsynonymous SNV 0.806 1 25 hm5C_associated_SNPs_104430 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:105037164-105037199
64251 chr18 71816260 71816260 1 + C A LIHC 71816256 + 71816236 71816276 41 ATCTGGACGCAGGGACCGAGCCCCCGAAAAGCAAAGGAGGA ATCTGGACGCAGGGACCGAGCCCCAGAAAAGCAAAGGAGGA < 41bp 0.368528195315597 0.774529674261784 0.09824684 0.18605515 prediction 0.549059348523568 Functional Gain - TIMM21 ENSG00000075336 CDS Human protein_coding chr18:71816256 chr18:71816260 synonymous SNV . 0 25 hm5C_associated_SNPs_104443 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:71816230-71816261
64251 chr12 6647516 6647516 1 + T G rs552128740 6647513 + 6647493 6647533 41 CGCACCTTGTCATGTACCATCAATAAAGTACCCTGTGCTCA CGCACCTTGTCATGTACCATCAAGAAAGTACCCTGTGCTCA < 41bp 0.455189711293343 0.774517254730233 0.06984851 0.30977538 prediction 0.549034509460465 Functional Gain - GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647513 chr12:6647516 . . 0 24 hm5C_associated_SNPs_104444 0 0 29 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:6647420-6647520
64251 chr5 148733364 148733364 1 + C A rs168463 148733360 + 148733340 148733380 41 AGCTATAGTAGTAAGAATCTCAAGCTGAAGGGCTTTGGGGA AGCTATAGTAGTAAGAATCTCAAGATGAAGGGCTTTGGGGA < 41bp 0.5848793336678 0.859388420361417 0.2710697 0.3802213 prediction 0.549018173387234 Functional Gain - GRPEL2-AS1 ENSG00000253618 ncRNA_intronic Human antisense chr5:148733360 chr5:148733364 . . 0 25 hm5C_associated_SNPs_104445 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:148733049-148733468
64251 chr16 68279444 68279444 1 + C G SKCM 68279443 + 68279423 68279463 41 CTCCCGGCCGGACGTCACCCCCCAGTGGTGCTGGGTGAGGC CTCCCGGCCGGACGTCACCCCGCAGTGGTGCTGGGTGAGGC < 41bp 0.469533726669832 0.774501862570954 0.06518978 0.12320474 prediction 0.549003725141909 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68279443 chr16:68279444 nonsynonymous SNV 0.813 4 22 hm5C_associated_SNPs_104446 0 0 5 DDX6 POSTAR2 ENCODE chr16:68279418-68279457
64251 chr1 41236342 41236342 1 + C G LUSC 41236341 + 41236321 41236361 41 AGGGAGCTGCATGCCCCTCTCCCAGGGATGACCTCACTCTC AGGGAGCTGCATGCCCCTCTCGCAGGGATGACCTCACTCTC < 41bp 0.550996950160024 0.825460033719526 0.8682314 0.9374691 prediction 0.548926167119004 Functional Gain - NFYC ENSG00000066136 CDS Human protein_coding chr1:41236341 chr1:41236342 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_104453 0 0 3 SF3B4 POSTAR2 ENCODE chr1:41236328-41236394
64251 chr3 32208467 32208467 1 + T G rs6791603 32208465 + 32208445 32208485 41 GGCGGTCCTCGGTGCAGCAGCATCAGCTTCACTTGTGGGGG GGCGGTCCTCGGTGCAGCAGCAGCAGCTTCACTTGTGGGGG < 41bp 0.572505718225659 0.846902694147707 0.15719497 0.42681244 prediction 0.548793951844096 Functional Gain - GPD1L ENSG00000152642 UTR3 Human protein_coding chr3:32208465 chr3:32208467 . . 0 23 hm5C_associated_SNPs_104459 1 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:32208456-32208477
64251 chr22 21138494 21138494 1 + C G BRCA 21138493 + 21138473 21138513 41 CCCTCGAAGCGCAACTGACACCCCGGGTGGTGGAGAGATGG CCCTCGAAGCGCAACTGACACGCCGGGTGGTGGAGAGATGG < 41bp 0.473079654698407 0.774371882680107 0.024623603 0.057486683 prediction 0.548743765360215 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21138493 chr22:21138494 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_104463 0 0 6 LIN28B POSTAR2 ENCODE chr22:21138446-21138497
64251 chr11 64893365 64893365 1 + T A rs11546366 64893361 + 64893341 64893381 41 CTGAGGCCCAGCCGAGCAGCCTGCTTGTCAGCATGCCCTGT CTGAGGCCCAGCCGAGCAGCCTGCATGTCAGCATGCCCTGT < 41bp 0.549276685415493 0.823644709115925 0.046172082 0.14367765 prediction 0.548736047400863 Functional Gain - MRPL49 ENSG00000149792 UTR3 Human protein_coding chr11:64893361 chr11:64893365 . . 0 25 hm5C_associated_SNPs_104464 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:64893341-64893380
64251 chr6 27101203 27101203 1 + C A UCEC 27101199 + 27101179 27101219 41 CCAACATTCAGGCCGTGCTACTGCCCAAAAAGACTGAGAGC CCAACATTCAGGCCGTGCTACTGCACAAAAAGACTGAGAGC < 41bp 0.384106090802045 0.774361853214009 0.22175261 0.19615689 prediction 0.548723706428019 Functional Gain - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101199 chr6:27101203 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_104465 0 0 36 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:27101120-27101260
64251 chr2 219300070 219300070 1 + C A rs144276467 219300066 + 219300046 219300086 41 TGGTTGCTGACACCATCTCCCGGACGGAGAAGCAAGTGGTG TGGTTGCTGACACCATCTCCCGGAAGGAGAAGCAAGTGGTG < 41bp 0.373903268510356 0.774360653892205 0.7551991 0.822491 prediction 0.548721307784409 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219300066 chr2:219300070 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_104466 0 0 2 EFTUD2 POSTAR2 ENCODE chr2:219300043-219300103
64251 chr16 2036361 2036361 1 + C A rs146752626 2036357 + 2036337 2036377 41 TACCCTGGCGCCTCACTCCTCACACGGGAAGACAGCGGGCC TACCCTGGCGCCTCACTCCTCACAAGGGAAGACAGCGGGCC < 41bp 0.393143319941527 0.774358197058153 0.15432495 0.31282127 prediction 0.548716394116305 Functional Gain - GFER ENSG00000261790 ncRNA_exonic Human lincRNA chr16:2036357 chr16:2036361 . . 0 25 hm5C_associated_SNPs_104467 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2036336-2036362
64251 chr18 72187612 72187612 1 + C G rs890336 72187611 + 72187591 72187631 41 CGGAAAGTTCTGGTTGTCGGCCGGGCACCACGGCTCACACC CGGAAAGTTCTGGTTGTCGGCGGGGCACCACGGCTCACACC < 41bp 0.546553554137025 0.820873351995437 0.6355901 0.91073126 prediction 0.548639595716824 Functional Gain - CNDP2 ENSG00000133313 UTR3 Human protein_coding chr18:72187611 chr18:72187612 . . 0 22 hm5C_associated_SNPs_104472 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr18:72187601-72187622
64251 chr9 127115819 127115819 1 - A C rs556621249 127115822 - 127115802 127115842 41 AGGTGGTGAGCATTGAGGCCCAGTAAGACACTCATGTGGCT AGGTGGTGAGCATTGAGGCCCAGGAAGACACTCATGTGGCT < 41bp 0.407688668591632 0.77431401321465 0.83513945 0.8751936 prediction 0.5486280264293 Functional Gain - LOC100129034 ENSG00000136930 UTR3 Human protein_coding chr9:127115822 chr9:127115819 . . 0 24 hm5C_associated_SNPs_104473 0 0 25 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:127115780-127115868
64251 chr11 76507258 76507258 1 + C G LGG 76507254 + 76507234 76507274 41 GCCTGGAACCGGCTCCATGCCGTGCCCAACCTCCGAGACTT GCCTGGAACCGGCTCCATGCCGTGGCCAACCTCCGAGACTT < 41bp 0.5084127561969 0.782710535145352 0.08502498 0.4239761 prediction 0.548595557896903 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507254 chr11:76507258 nonsynonymous SNV 0.054 4 25 hm5C_associated_SNPs_104480 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76507119-76507299
64251 chr8 27394366 27394366 1 + C G rs13439459 27394362 + 27394342 27394382 41 TTTCAAAAGCCTCTTCAGAGCAAGCGATGAGGTGAGGGGTG TTTCAAAAGCCTCTTCAGAGCAAGGGATGAGGTGAGGGGTG < 41bp 0.508252687738256 0.7825053458584 0.81168854 0.8987418 prediction 0.548505316240287 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27394362 chr8:27394366 nonsynonymous SNV 0.593 1 25 hm5C_associated_SNPs_104483 0 0 3 DDX24 POSTAR2 ENCODE chr8:27394353-27394371
64251 chr2 220110255 220110255 1 + C G rs3755052 220110251 + 220110231 220110271 41 CTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCAT CTGGCCCGAGCCAGGTCAGTCCGGGAGTGCAGATGGCCCAT < 41bp 0.528343206217355 0.802575662139388 0.75605404 0.89406145 prediction 0.548464911844065 Functional Gain - STK16 ENSG00000115661 UTR5 Human protein_coding chr2:220110251 chr2:220110255 . . 0 25 hm5C_associated_SNPs_104488 0 0 3 DDX3X POSTAR2 ENCODE chr2:220110224-220110293
64251 chr5 169510020 169510020 1 + T G rs1045176 169510018 + 169509998 169510038 41 AGGCCAATCAGGTCCCAGAGCTTGAATGCTAACAAGCCCAG AGGCCAATCAGGTCCCAGAGCTGGAATGCTAACAAGCCCAG < 41bp 0.469203719991204 0.774215559631211 0.11023304 0.2478509 prediction 0.548431119262422 Functional Gain - DOCK2 ENSG00000134516 UTR3 Human protein_coding chr5:169510018 chr5:169510020 . . 0 23 hm5C_associated_SNPs_104491 0 0 1 YBX3 POSTAR2 ENCODE chr5:169509984-169510071
64251 chr4 41259007 41259007 1 + C G BLCA 41259006 + 41258986 41259026 41 CCGCGAAGATGCAGCTCAAGCCGATGGAGATCAACCCCGAG CCGCGAAGATGCAGCTCAAGCGGATGGAGATCAACCCCGAG < 41bp 0.480415396450884 0.774192641683254 0.38833338 0.5526122 prediction 0.548385283366509 Functional Gain - UCHL1 ENSG00000154277 CDS Human protein_coding chr4:41259006 chr4:41259007 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_104494 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:41258960-41259024
64251 chr3 50391305 50391305 1 + C G rs193294004 50391304 + 50391284 50391324 41 ACAGTTGGGCATTTGGAGGCCCGTGTGTGAATTCCTGCTCC ACAGTTGGGCATTTGGAGGCCGGTGTGTGAATTCCTGCTCC < 41bp 0.513322284140391 0.787503413534918 0.26147273 0.56990075 prediction 0.548362258789054 Functional Gain - CYB561D2 ENSG00000114395 UTR3 Human protein_coding chr3:50391304 chr3:50391305 . . 0 22 hm5C_associated_SNPs_104496 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:50391273-50391306
64251 chr17 19999999 19999999 1 + T G rs146091398 19999997 + 19999977 20000017 41 GCCAAGCCCTGGAACCCAGCCATCAGAGCAGGGGGCCACGG GCCAAGCCCTGGAACCCAGCCAGCAGAGCAGGGGGCCACGG < 41bp 0.592192741016375 0.866371063634033 0.2885847 0.51575124 prediction 0.548356645235316 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:19999997 chr17:19999999 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_104497 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:19999998-19999999
64251 chr22 41913629 41913629 1 + C G BLCA 41913625 + 41913605 41913645 41 AAGAAGTACCTGAGCAAGACCGGCCGGGAAGGTGAGCTGGC AAGAAGTACCTGAGCAAGACCGGCGGGGAAGGTGAGCTGGC < 41bp 0.494340221389429 0.774177872378893 0.8248092 0.89952505 prediction 0.548355744757787 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41913625 chr22:41913629 nonsynonymous SNV 0.821 4 25 hm5C_associated_SNPs_104498 0 0 2 PRPF8 POSTAR2 ENCODE chr22:41913628-41913707
64251 chr8 27373877 27373877 1 + T G LUAD 27373874 + 27373854 27373894 41 GGCAGGTTACCGGGTCCTAGCTATGGACATGAAAGGCTATG GGCAGGTTACCGGGTCCTAGCTAGGGACATGAAAGGCTATG < 41bp 0.37911289860751 0.774157221704639 0.06951347 0.6892747 prediction 0.548314443409277 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27373874 chr8:27373877 nonsynonymous SNV 0.886 1 24 hm5C_associated_SNPs_104502 0 0 2 DDX24 POSTAR2 ENCODE chr8:27373859-27373902
64251 chr2 48807793 48807793 1 + C G UCEC 48807789 + 48807769 48807809 41 AAAGATGTGCTCCACAAATCCAGGCAAATGGGTCACCTTTG AAAGATGTGCTCCACAAATCCAGGGAAATGGGTCACCTTTG < 41bp 0.519007931978669 0.793146712515117 0.74874836 0.8886431 prediction 0.548277561072896 Functional Gain - STON1;STON1-GTF2A1L ENSG00000068781;ENSG00000243244 CDS Human other chr2:48807789 chr2:48807793 synonymous SNV . 0 25 hm5C_associated_SNPs_104505 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:48807793-48807794
64251 chr2 120439269 120439269 1 + C G rs116577552 120439268 + 120439248 120439288 41 ACCCAGCGGGAACATCGTCCCCAGACACTTGTTCCGAATCA ACCCAGCGGGAACATCGTCCCGAGACACTTGTTCCGAATCA < 41bp 0.476494151072881 0.774120031877098 0.06729105 0.33015627 prediction 0.548240063754195 Functional Gain - TMEM177 ENSG00000144120 CDS Human protein_coding chr2:120439268 chr2:120439269 synonymous SNV . 0 22 hm5C_associated_SNPs_104506 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:120439260-120439280
64251 chr20 39987094 39987094 1 + C A STAD 39987090 + 39987070 39987110 41 CTCCCACAGGATGTCTTTGCCTACCGGCAGGTGGGCCTGCC CTCCCACAGGATGTCTTTGCCTACAGGCAGGTGGGCCTGCC < 41bp 0.359564461611474 0.774110167705541 0.117412776 0.7841941 prediction 0.548220335411082 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39987090 chr20:39987094 synonymous SNV . 0 25 hm5C_associated_SNPs_104508 0 0 2 GRWD1 POSTAR2 ENCODE chr20:39987081-39987107
64251 chr10 111967482 111967482 1 + C A rs560254912 111967478 + 111967458 111967498 41 GCCCCGGCGCCTTCTCTGCTCCAGCCGGCCGGGTCTCCCTG GCCCCGGCGCCTTCTCTGCTCCAGACGGCCGGGTCTCCCTG < 41bp 0.555565760650121 0.829660831927419 0.38326836 0.85427153 prediction 0.548190142554595 Functional Gain - MXI1 ENSG00000119950 UTR5 Human protein_coding chr10:111967478 chr10:111967482 . . 0 25 hm5C_associated_SNPs_104511 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585674 chr10:111967469-111967498
64251 chr11 3418615 3418615 1 + T A rs550947983 3418611 + 3418591 3418631 41 TGAGAAGTGAGGAGCCCCTCCACCTGGCAGCCACCCCGTCT TGAGAAGTGAGGAGCCCCTCCACCAGGCAGCCACCCCGTCT < 41bp 0.490781133444211 0.774040776109443 0.31910253 0.39233837 prediction 0.548081552218887 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3418611 chr11:3418615 . . 0 25 hm5C_associated_SNPs_104519 0 0 1 UCHL5 POSTAR2 ENCODE chr11:3418607-3418629
64251 chr11 46299309 46299309 1 + C G rs11038846 46299308 + 46299288 46299328 41 GGGAGCACTTAGCTCCCCCGCCCCGGCTCCCACCCTGTCCG GGGAGCACTTAGCTCCCCCGCGCCGGCTCCCACCCTGTCCG < 41bp 0.486340921372064 0.773939580819288 0.27061334 0.36247596 prediction 0.547879161638576 Functional Gain - CREB3L1 ENSG00000157613 UTR5 Human protein_coding chr11:46299308 chr11:46299309 . . 0 22 hm5C_associated_SNPs_104525 0 0 1 DDX3X POSTAR2 ENCODE chr11:46299292-46299448
64251 chr12 120933914 120933914 1 + T A rs550315954 120933910 + 120933890 120933930 41 CGGCGGCGGCTGGCGTGGGGCTGCTTAGATGCGCCACGGTT CGGCGGCGGCTGGCGTGGGGCTGCATAGATGCGCCACGGTT < 41bp 0.519077673333508 0.792966371287583 0.5895274 0.3067134 prediction 0.54777739590815 Functional Gain - DYNLL1 ENSG00000088986 UTR5 Human protein_coding chr12:120933910 chr12:120933914 . . 0 25 hm5C_associated_SNPs_104527 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:120933900-120933920
64251 chr12 65720631 65720631 1 + T G COAD 65720628 + 65720608 65720648 41 TCGTGTAGGGATAAAAAGAACTGTAAGGTGGTCTTTTCCCA TCGTGTAGGGATAAAAAGAACTGGAAGGTGGTCTTTTCCCA < 41bp 0.61921648088816 0.893082886877151 0.5501205 0.3401687 prediction 0.547732811977982 Functional Gain - MSRB3 ENSG00000174099 CDS Human protein_coding chr12:65720628 chr12:65720631 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_104531 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr12:65720620-65720645
64251 chr6 159029451 159029451 1 + C A PRAD 159029447 + 159029427 159029467 41 TTTCAGTCCATGTTCCTGTGCGCCCTGCTGCTCTTCTGGCT TTTCAGTCCATGTTCCTGTGCGCCATGCTGCTCTTCTGGCT < 41bp 0.348438831646971 0.773849658170753 0.023388118 0.013145 prediction 0.547699316341506 Functional Gain - TMEM181 ENSG00000146433 CDS Human protein_coding chr6:159029447 chr6:159029451 nonsynonymous SNV 0.238 4 25 hm5C_associated_SNPs_104533 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:159029444-159029481
64251 chr3 11348463 11348463 1 + T G STAD 11348460 + 11348440 11348480 41 GCTGCCCAGCTATTGGAACACTGTATAACACCAACACACTC GCTGCCCAGCTATTGGAACACTGGATAACACCAACACACTC < 41bp 0.618441053317035 0.89226574309575 0.24474669 0.18623567 prediction 0.547649379557429 Functional Gain - ATG7 ENSG00000197548 CDS Human protein_coding chr3:11348460 chr3:11348463 nonsynonymous SNV 0.258 0 24 hm5C_associated_SNPs_104537 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:11348449-11348470
64251 chr7 21940692 21940692 1 - G T SARC 21940696 - 21940676 21940716 41 GGTGGCTTTTGCAAAGATGACCGGCATAGGGCATGCCAGCT GGTGGCTTTTGCAAAGATGACCGGAATAGGGCATGCCAGCT < 41bp 0.594171541155752 0.867981780031466 0.37097365 0.61361176 prediction 0.547620477751428 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21940696 chr7:21940692 nonsynonymous SNV 0.250 4 25 hm5C_associated_SNPs_104539 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:21940670-21940697
64251 chr11 607560 607560 1 + C A rs202208436 607556 + 607536 607576 41 CGGGATGCGGCCCCGGCCCACGGGCAGAGCATTGAGATCCC CGGGATGCGGCCCCGGCCCACGGGAAGAGCATTGAGATCCC < 41bp 0.632197597337922 0.905952517673521 0.58334136 0.8731667 prediction 0.5475098406712 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:607556 chr11:607560 nonsynonymous SNV 0.003 2 25 hm5C_associated_SNPs_104546 0 0 1 SF3B1 POSTAR2 ENCODE chr11:607552-607586
64251 chr4 69973966 69973966 1 + T A LAML 69973962 + 69973942 69973982 41 TCACATGAAGGCCAGGGGAGCAGCTGTTAGAGTGGACTTCA TCACATGAAGGCCAGGGGAGCAGCAGTTAGAGTGGACTTCA < 41bp 0.555301057867999 0.829042044714831 0.9012422 0.45474592 prediction 0.547481973693664 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69973962 chr4:69973966 synonymous SNV . 0 25 hm5C_associated_SNPs_104548 0 0 1 SND1 POSTAR2 ENCODE chr4:69973941-69973983
64251 chr11 124857980 124857980 1 + C G LUAD 124857979 + 124857959 124857999 41 CTGCATGTTCTCTCCAACGACCAGAATATTCTACCCAAATG CTGCATGTTCTCTCCAACGACGAGAATATTCTACCCAAATG < 41bp 0.486342597139485 0.773711265499944 0.20371455 0.6450983 prediction 0.547422530999888 Functional Gain - CCDC15 ENSG00000149548 CDS Human protein_coding chr11:124857979 chr11:124857980 nonsynonymous SNV 0.052 1 22 hm5C_associated_SNPs_104550 0 0 1 RBM15 POSTAR2 ENCODE chr11:124857935-124857994
64251 chr2 219267126 219267126 1 + C G HNSC 219267125 + 219267105 219267145 41 GAGATTGATGGGGTGGTCCACCAGGTGAGGGCCAGGAAGAG GAGATTGATGGGGTGGTCCACGAGGTGAGGGCCAGGAAGAG < 41bp 0.46499936975612 0.773709388123712 0.7720356 0.78699505 prediction 0.547418776247423 Functional Gain - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219267125 chr2:219267126 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_104551 0 0 11 BUD13 POSTAR2 ENCODE chr2:219267088-219267150
64251 chr21 38884593 38884593 1 + C A SKCM 38884589 + 38884569 38884609 41 GCAATCAGGCCTACCAGAATCGCCCAGTGGCTGCTAATACC GCAATCAGGCCTACCAGAATCGCCAAGTGGCTGCTAATACC < 41bp 0.366410110590224 0.773691444505896 0.099669576 0.91170216 prediction 0.547382889011793 Functional Gain - DYRK1A ENSG00000157540 CDS Human protein_coding chr21:38884589 chr21:38884593 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_104554 0 0 18 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr21:38884494-38884640
64251 chr1 150471056 150471056 1 + C G rs116476409 150471055 + 150471035 150471075 41 CTTTGGGGCTCTACACCGGGCCGAAGCCTCTGGTGGTCTGG CTTTGGGGCTCTACACCGGGCGGAAGCCTCTGGTGGTCTGG < 41bp 0.464118462131698 0.773678717113681 0.25827497 0.5480741 prediction 0.547357434227361 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150471055 chr1:150471056 synonymous SNV . 0 22 hm5C_associated_SNPs_104555 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:150471033-150471060
64251 chr16 3208988 3208988 1 + C A rs372301322 3208984 + 3208964 3209004 41 GAGGTCCCGGGTTCAAATCCCGGACGAGCCCGCTTTTTTTT GAGGTCCCGGGTTCAAATCCCGGAAGAGCCCGCTTTTTTTT < 41bp 0.423134594414572 0.773603393987153 0.6166431 0.772078 prediction 0.547206787974306 Functional Gain - CASP16P;OR1F1 ENSG00000261889;ENSG00000262521 intergenic Human other chr16:3208984 chr16:3208988 . . 0 25 hm5C_associated_SNPs_104564 0 0 17 SSB POSTAR2 GSE95683,GSM2521599 chr16:3208960-3209000
64251 chr18 72187612 72187612 1 + C G rs890336 72187608 + 72187588 72187628 41 CTGCGGAAAGTTCTGGTTGTCGGCCGGGCACCACGGCTCAC CTGCGGAAAGTTCTGGTTGTCGGCGGGGCACCACGGCTCAC < 41bp 0.526254705500152 0.799811634054119 0.51864743 0.93641555 prediction 0.547113857107933 Functional Gain - CNDP2 ENSG00000133313 UTR3 Human protein_coding chr18:72187608 chr18:72187612 . . 0 25 hm5C_associated_SNPs_104569 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr18:72187601-72187622
64251 chr12 56388173 56388173 1 + C G rs147229892 56388172 + 56388152 56388192 41 TTCCCCAGGCTTCTCCCTCCCCCCACCCCCATAGGAACAGG TTCCCCAGGCTTCTCCCTCCCGCCACCCCCATAGGAACAGG < 41bp 0.486723812782098 0.773533498880042 0.07354951 0.080441594 prediction 0.547066997760084 Functional Gain - RAB5B ENSG00000255990 ncRNA_exonic Human other chr12:56388172 chr12:56388173 . . 0 22 hm5C_associated_SNPs_104572 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:56388168-56388283
64251 chr19 36640548 36640548 1 + C G SKCM 36640547 + 36640527 36640567 41 AACATCCAGGAGGTAAGGACCCCCATATTGGGGTATGGGTG AACATCCAGGAGGTAAGGACCGCCATATTGGGGTATGGGTG < 41bp 0.472071015438519 0.773533373886026 0.6031412 0.93581027 prediction 0.547066747772053 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640547 chr19:36640548 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_104573 0 0 1 PRPF8 POSTAR2 ENCODE chr19:36640539-36640588
64251 chr7 141443442 141443442 1 + T G OV 141443439 + 141443419 141443459 41 GGAAGGAAAAAATCCAGTCACAATATTTTCTCTAGCAACTA GGAAGGAAAAAATCCAGTCACAAGATTTTCTCTAGCAACTA < 41bp 0.623566466039372 0.897098790320407 0.37272054 0.67258346 prediction 0.547064648562069 Functional Gain - SSBP1 ENSG00000106028 CDS Human protein_coding chr7:141443439 chr7:141443442 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_104574 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr7:141443365-141443489
64251 chr18 32682068 32682068 1 + T A rs111906099 32682064 + 32682044 32682084 41 TGCAATTCCTCCTCCTGACCCTGGTGAACAGATCTTCAACC TGCAATTCCTCCTCCTGACCCTGGAGAACAGATCTTCAACC < 41bp 0.578689400152314 0.852156460343285 0.185204 0.13826731 prediction 0.546934120381943 Functional Gain - MAPRE2 ENSG00000166974 CDS Human protein_coding chr18:32682064 chr18:32682068 synonymous SNV . 0 25 hm5C_associated_SNPs_104579 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:32682047-32682069
64251 chr12 120901496 120901496 1 + T G rs187091912 120901494 + 120901474 120901514 41 TCTCTCCAGGTTACAAATACCATGACCAAACTGTGTAATGT TCTCTCCAGGTTACAAATACCAGGACCAAACTGTGTAATGT < 41bp 0.464540237019356 0.773458343894641 0.031266212 0.35718772 prediction 0.546916687789283 Functional Gain - GATC ENSG00000111786 intronic Human protein_coding chr12:120901494 chr12:120901496 . . 0 23 hm5C_associated_SNPs_104582 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:120901477-120901529
64251 chr6 26199903 26199903 1 + C G rs34961555 26199902 + 26199882 26199922 41 TAGCCGCAAGGAGAGCTATTCCGTGTACGTGTACAAGGTGC TAGCCGCAAGGAGAGCTATTCGGTGTACGTGTACAAGGTGC < 41bp 0.476846092443925 0.77345413227302 0.53562564 0.87626815 prediction 0.546908264546039 Functional Gain - HIST1H2BF ENSG00000197846 CDS Human other chr6:26199902 chr6:26199903 synonymous SNV . 0 22 hm5C_associated_SNPs_104583 0 1 8 FUS POSTAR2 DRA001158,DRS012384 chr6:26199892-26199924
64251 chr2 31489531 31489531 1 + C A SKCM 31489527 + 31489507 31489547 41 CGAGCTGCCCAACGAGCTGCCTGCCCACCTCCTGCCCCCGT CGAGCTGCCCAACGAGCTGCCTGCACACCTCCTGCCCCCGT < 41bp 0.355542727757294 0.773366873954212 0.04132086 0.016876698 prediction 0.546733747908425 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31489527 chr2:31489531 synonymous SNV . 0 25 hm5C_associated_SNPs_104588 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:31489529-31489552
64251 chr2 70167996 70167996 1 + C G rs77021567 70167995 + 70167975 70168015 41 AGCCCAAGGCAGCTAATCCCCCCAACCCCATCCTCCGCGCC AGCCCAAGGCAGCTAATCCCCGCAACCCCATCCTCCGCGCC < 41bp 0.485302940014962 0.773339837297617 0.2992469 0.4120224 prediction 0.546679674595234 Functional Gain - MXD1 ENSG00000059728 UTR3 Human protein_coding chr2:70167995 chr2:70167996 . . 0 22 hm5C_associated_SNPs_104592 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:70167988-70168057
64251 chr11 44148448 44148448 1 + C G SKCM 44148447 + 44148427 44148467 41 TGTTACAAGCTGGCTGTGTCCCGGTTGTCATTGCAGACTCC TGTTACAAGCTGGCTGTGTCCGGGTTGTCATTGCAGACTCC < 41bp 0.46838187481132 0.773280543127196 0.16078284 0.7304201 prediction 0.546561086254391 Functional Gain - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44148447 chr11:44148448 nonsynonymous SNV 0.909 5 22 hm5C_associated_SNPs_104600 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:44148431-44148468
64251 chr14 101526154 101526154 1 + T G ESCA 101526151 + 101526131 101526171 41 TATTTGTGACGAATCATACACGGTTGACCTATTTTTCAGTA TATTTGTGACGAATCATACACGGGTGACCTATTTTTCAGTA < 41bp 0.449940310923528 0.773244766627192 0.17347124 0.5879647 prediction 0.546489533254383 Functional Gain - MIR154 ENSG00000207978 ncRNA_exonic Human miRNA chr14:101526151 chr14:101526154 . . 0 24 hm5C_associated_SNPs_104606 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:101526140-101526160
64251 chr2 220095054 220095054 1 + C A GBM 220095050 + 220095030 220095070 41 TGACCTCAGCGCGGATGCTCCGGTCTTTCAGGGCCTGAGCC TGACCTCAGCGCGGATGCTCCGGTATTTCAGGGCCTGAGCC < 41bp 0.404325919578163 0.773223683250592 0.7692579 0.872337 prediction 0.546447366501183 Functional Gain - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220095050 chr2:220095054 synonymous SNV . 0 25 hm5C_associated_SNPs_104611 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:220095053-220095054
64251 chr8 59494819 59494819 1 + T G rs117089964 59494816 + 59494796 59494836 41 CATTCCATGTAAGCATTAAACAGTGTATGTAGGTTTCAAGA CATTCCATGTAAGCATTAAACAGGGTATGTAGGTTTCAAGA < 41bp 0.485829410739545 0.773208594914638 0.08795953 0.9158073 prediction 0.546417189829276 Functional Gain - SDCBP ENSG00000137575 UTR3 Human protein_coding chr8:59494816 chr8:59494819 . . 0 24 hm5C_associated_SNPs_104612 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:59494793-59494835
64251 chr15 40498435 40498435 1 + C A UCEC 40498431 + 40498411 40498451 41 GAGCGAGGATGCCATTATCACAGGCTTCAGAAATGTAACAA GAGCGAGGATGCCATTATCACAGGATTCAGAAATGTAACAA < 41bp 0.636622395993218 0.909815511987537 0.9184467 0.91767335 prediction 0.546386231988639 Functional Gain - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40498431 chr15:40498435 synonymous SNV . 0 25 hm5C_associated_SNPs_104614 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:40498390-40498435
64251 chr1 27660674 27660674 1 + C A MESO 27660670 + 27660650 27660690 41 CTGCTGTGACAACTGCCACTCGCACGTGGCATTGGCCCTGA CTGCTGTGACAACTGCCACTCGCAAGTGGCATTGGCCCTGA < 41bp 0.637015510179581 0.910151438855692 0.03486091 0.15464589 prediction 0.546271857352222 Functional Gain - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27660670 chr1:27660674 nonsynonymous SNV 0.584 4 25 hm5C_associated_SNPs_104619 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:27660643-27660681
64251 chr22 46693337 46693337 1 + C G rs201036893 46693333 + 46693313 46693353 41 GGCCGCGATGAGCCTTCAGCCTGCCGGGCAGGGGACGTGAA GGCCGCGATGAGCCTTCAGCCTGCGGGGCAGGGGACGTGAA < 41bp 0.535751191623935 0.808852227615256 0.13350305 0.3207606 prediction 0.546202071982643 Functional Gain - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46693333 chr22:46693337 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_104624 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:46693280-46693340
64251 chr2 26410484 26410484 1 + C A LIHC 26410480 + 26410460 26410500 41 CTCGGGTCCTGTGGCTACCTCTGGCCCTGCGTATTCCCCAG CTCGGGTCCTGTGGCTACCTCTGGACCTGCGTATTCCCCAG < 41bp 0.631766391537761 0.904863529086716 0.6145865 0.7019294 prediction 0.546194275097909 Functional Gain - GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26410480 chr2:26410484 synonymous SNV . 0 25 hm5C_associated_SNPs_104626 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:26410443-26410488
64251 chr6 116757938 116757938 1 + C A COAD 116757934 + 116757914 116757954 41 GTCCCGAGTCCGGAACACAGCTAGCTTTAGGAAGACTGCTG GTCCCGAGTCCGGAACACAGCTAGATTTAGGAAGACTGCTG < 41bp 0.38118997083849 0.773092672441727 0.11198819 0.07248652 prediction 0.546185344883454 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116757934 chr6:116757938 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_104627 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:116757899-116757954
64251 chr19 30102776 30102776 1 + C G LUAD 30102772 + 30102752 30102792 41 TTCTGACTTTGCTGCAGATACAGCCTTTTCCTCCCTCTCCA TTCTGACTTTGCTGCAGATACAGCGTTTTCCTCCCTCTCCA < 41bp 0.488551242960953 0.773049083468108 0.012382984 0.035058647 prediction 0.546098166936215 Functional Gain - POP4 ENSG00000105171 CDS Human protein_coding chr19:30102772 chr19:30102776 nonsynonymous SNV 0.020 1 25 hm5C_associated_SNPs_104632 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:30102760-30102800
64251 chr16 67877120 67877120 1 + C A STAD 67877116 + 67877096 67877136 41 TGCTACCGCAGGGCTGGAGGCTGCCGAGTGCCCTATGGGCC TGCTACCGCAGGGCTGGAGGCTGCAGAGTGCCCTATGGGCC < 41bp 0.632652924205669 0.905685988575264 0.35348272 0.6672542 prediction 0.546066128739189 Functional Gain - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67877116 chr16:67877120 synonymous SNV . 0 25 hm5C_associated_SNPs_104634 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr16:67877108-67877128
64251 chr19 804074 804074 1 + C G SKCM 804070 + 804050 804090 41 AGCAAGAAGTTCAAAGGTGACAGCCGAAGTGCAGGCGTCCC AGCAAGAAGTTCAAAGGTGACAGCGGAAGTGCAGGCGTCCC < 41bp 0.485259775354064 0.773022097555104 0.16007015 0.27885926 prediction 0.546044195110209 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804070 chr19:804074 nonsynonymous SNV 0.418 2 25 hm5C_associated_SNPs_104635 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804051-804078
64251 chr22 23465281 23465281 1 + T A LUSC 23465277 + 23465257 23465297 41 TACTTTCCTTTCCCCAGAGTCGGATGGCAGAGAGCTTGCGC TACTTTCCTTTCCCCAGAGTCGGAAGGCAGAGAGCTTGCGC < 41bp 0.470758929473954 0.773020310340714 0.50251454 0.4695907 prediction 0.546040620681428 Functional Gain - GNAZ ENSG00000128266 CDS Human protein_coding chr22:23465277 chr22:23465281 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_104637 0 0 1 BUD13 POSTAR2 ENCODE chr22:23465233-23465305
64251 chr15 45007681 45007681 1 + T G COAD 45007679 + 45007659 45007699 41 GAGAATGGAAAGTCAAATTTCCTGAATTGCTATGTGTCTGG GAGAATGGAAAGTCAAATTTCCGGAATTGCTATGTGTCTGG < 41bp 0.566085202993539 0.839045446766961 0.17098978 0.40755737 prediction 0.545920487546842 Functional Gain - B2M ENSG00000166710 CDS Human protein_coding chr15:45007679 chr15:45007681 nonsynonymous SNV 0.674 3 23 hm5C_associated_SNPs_104644 0 0 19 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:45007627-45007742
64251 chr22 46202885 46202885 1 + T G UCEC 46202883 + 46202863 46202903 41 TTGATCCTGGACAACTGCAACATCAGTGACAGTAACCCCTG TTGATCCTGGACAACTGCAACAGCAGTGACAGTAACCCCTG < 41bp 0.577937691708043 0.850887095495399 0.14720637 0.48527583 prediction 0.545898807574711 Functional Gain - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46202883 chr22:46202885 nonsynonymous SNV 0.636 2 23 hm5C_associated_SNPs_104646 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr22:46202840-46202895
64251 chr19 11558533 11558533 1 + C G rs201537803 11558532 + 11558512 11558552 41 CCCCACCGCCACTGTCACCCCCGCAGCCGGCCAGCCCTGCT CCCCACCGCCACTGTCACCCCGGCAGCCGGCCAGCCCTGCT < 41bp 0.561495304586636 0.834393272368378 0.34685236 0.8276444 prediction 0.545795935563485 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11558532 chr19:11558533 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_104650 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:11558500-11558540
64251 chr19 18499422 18499422 1 + C G rs1058587 18499421 + 18499401 18499441 41 GCGCGTGCGCGCAACGGGGACCACTGTCCGCTCGGGCCCGG GCGCGTGCGCGCAACGGGGACGACTGTCCGCTCGGGCCCGG < 41bp 0.540973310254331 0.81382017228899 0.22458881 0.284122 prediction 0.545693724069316 Functional Gain - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18499421 chr19:18499422 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_104654 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:18499416-18499441
64251 chr16 85691118 85691118 1 + C G rs149163248 85691117 + 85691097 85691137 41 GGACCGGCAGTCTCAGGTGTCCGAGTTCCGGCAGCAGGTGC GGACCGGCAGTCTCAGGTGTCGGAGTTCCGGCAGCAGGTGC < 41bp 0.561526250713232 0.834359356642912 0.8670444 0.92269313 prediction 0.545666211859361 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85691117 chr16:85691118 synonymous SNV . 0 22 hm5C_associated_SNPs_104656 0 0 7 BUD13 POSTAR2 ENCODE chr16:85691090-85691163
64251 chr17 48456193 48456193 1 + T C rs12450550 48456191 + 48456171 48456211 41 CTTCAGGGCTTTGTAACTGACATCACAGCAAAGACAGCAGG CTTCAGGGCTTTGTAACTGACACCACAGCAAAGACAGCAGG < 41bp 0.511149659307991 0.783953375689933 0.10138005 0.04144934 prediction 0.545607432763884 Functional Gain - EME1 ENSG00000154920 CDS Human protein_coding chr17:48456191 chr17:48456193 nonsynonymous SNV 0.607 0 23 hm5C_associated_SNPs_104659 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:48456171-48456207
64251 chr16 129531 129531 1 + C G rs2259275 129527 + 129507 129547 41 TGCAGAGCAGCCACACAGCTCGTCCGATGCAGCCCAGGCAC TGCAGAGCAGCCACACAGCTCGTCGGATGCAGCCCAGGCAC < 41bp 0.494680679897898 0.772795678355367 0.14775032 0.30410558 prediction 0.545591356710734 Functional Gain - MPG ENSG00000103152 CDS Human protein_coding chr16:129527 chr16:129531 synonymous SNV . 0 25 hm5C_associated_SNPs_104660 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:129524-129564
64251 chr8 125559294 125559294 1 + T G STAD 125559292 + 125559272 125559312 41 CTTCTGAGAAGGCAATGTATCCTGATTACTTTGCCAAGAGA CTTCTGAGAAGGCAATGTATCCGGATTACTTTGCCAAGAGA < 41bp 0.587539107581052 0.860296632062845 0.38820556 0.87901866 prediction 0.545515048963587 Functional Gain - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125559292 chr8:125559294 synonymous SNV . 0 23 hm5C_associated_SNPs_104665 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr8:125559262-125559322
64251 chr12 105380151 105380151 1 + C G SARC 105380150 + 105380130 105380170 41 CATGGAGGTCCATGGCAAGCCCAAGGCTAGCCCGAGTTGTT CATGGAGGTCCATGGCAAGCCGAAGGCTAGCCCGAGTTGTT < 41bp 0.524021183550159 0.796763084481346 0.2682331 0.4823559 prediction 0.545483801862374 Functional Gain - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380150 chr12:105380151 synonymous SNV . 0 22 hm5C_associated_SNPs_104668 0 0 3 DDX3X POSTAR2 ENCODE chr12:105380103-105380246
64251 chr4 71859352 71859352 1 + C A rs2306744 71859348 + 71859328 71859368 41 GCGGCTTGAGGAGGGCGGGGCCGCCCCGCAGGCCCGCCAGT GCGGCTTGAGGAGGGCGGGGCCGCACCGCAGGCCCGCCAGT < 41bp 0.425873495080776 0.772728308331413 0.73721635 0.83408564 prediction 0.545456616662826 Functional Gain - DCK ENSG00000156136 UTR5 Human protein_coding chr4:71859348 chr4:71859352 . . 0 25 hm5C_associated_SNPs_104670 0 0 1 DDX3X POSTAR2 ENCODE chr4:71859347-71859500
64251 chr9 135866446 135866446 1 + C G rs148238677 135866445 + 135866425 135866465 41 CAATCTCAAGTGAGGCTGCGCCGGCTCCCAGCTCCTGGCCA CAATCTCAAGTGAGGCTGCGCGGGCTCCCAGCTCCTGGCCA < 41bp 0.534408659745481 0.807128434956801 0.3015702 0.84212697 prediction 0.545439550422639 Functional Gain - GFI1B ENSG00000165702 UTR3 Human protein_coding chr9:135866445 chr9:135866446 . . 0 22 hm5C_associated_SNPs_104672 0 0 1 RPS3 POSTAR2 ENCODE chr9:135866389-135866480
64251 chr8 42025245 42025245 1 + T C UCEC 42025243 + 42025223 42025263 41 CTACCAAGTTTGAAGGGGACCATGAGTCTTCAGGCTGGAGC CTACCAAGTTTGAAGGGGACCACGAGTCTTCAGGCTGGAGC < 41bp 0.517083616677982 0.789773860513972 0.07883492 0.09759125 prediction 0.545380487671982 Functional Gain - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42025243 chr8:42025245 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_104676 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:42025234-42025263
64251 chr11 65632497 65632497 1 + C A COAD 65632493 + 65632473 65632513 41 CCCTTCTTCCCTCAGGGCCACACCCTACGCAGCCGCCCCTG CCCTTCTTCCCTCAGGGCCACACCATACGCAGCCGCCCCTG < 41bp 0.349479696493659 0.772655536178919 0.041089952 0.13706669 prediction 0.545311072357839 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65632493 chr11:65632497 nonsynonymous SNV 0.978 1 25 hm5C_associated_SNPs_104681 0 0 16 BUD13 POSTAR2 ENCODE chr11:65632437-65632529
64251 chr3 3188150 3188150 1 + T C COAD 3188148 + 3188128 3188168 41 TTGTAGACAAACCTGGTGACCATGATCCTGAGACTTTGGAA TTGTAGACAAACCTGGTGACCACGATCCTGAGACTTTGGAA < 41bp 0.517699172926329 0.790337840302807 0.36702687 0.3268172 prediction 0.545277334752956 Functional Gain - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3188148 chr3:3188150 synonymous SNV . 0 23 hm5C_associated_SNPs_104683 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:3188110-3188173
64251 chr5 134191112 134191112 1 + T G LUAD 134191110 + 134191090 134191130 41 TGATGCATGGCAGAGCAGTTCATGGGGTAGAGGAAACTAGC TGATGCATGGCAGAGCAGTTCAGGGGGTAGAGGAAACTAGC < 41bp 0.57514773072741 0.847777288925966 0.7064415 0.9338366 prediction 0.545259116397112 Functional Gain - C5orf24 ENSG00000181904 CDS Human protein_coding chr5:134191110 chr5:134191112 nonsynonymous SNV 0.953 3 23 hm5C_associated_SNPs_104686 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:134191077-134191140
64251 chr17 79423466 79423466 1 + C G UCEC 79423465 + 79423445 79423485 41 CCAGCAGAAGGAGGCTACCCCCGGGGGGCGCATCCGGGAGA CCAGCAGAAGGAGGCTACCCCGGGGGGGCGCATCCGGGAGA < 41bp 0.560049213361021 0.832657698886646 0.92712855 0.93885195 prediction 0.54521697105125 Functional Gain - BAHCC1 ENSG00000171282 CDS Human other chr17:79423465 chr17:79423466 synonymous SNV . 0 22 hm5C_associated_SNPs_104688 0 0 1 UCHL5 POSTAR2 ENCODE chr17:79423434-79423494
64251 chr7 86781963 86781963 1 + C G rs542890455 86781962 + 86781942 86781982 41 CCCTTGCTGCCCGCTAGCTCCCGCCGGCTGGCGCAAGCTGT CCCTTGCTGCCCGCTAGCTCCGGCCGGCTGGCGCAAGCTGT < 41bp 0.51043690464557 0.782949269162535 0.4379776 0.6020881 prediction 0.545024729033929 Functional Gain - DMTF1 ENSG00000135164 UTR5 Human protein_coding chr7:86781962 chr7:86781963 . . 0 22 hm5C_associated_SNPs_104694 0 0 6 EFTUD2 POSTAR2 ENCODE chr7:86781888-86781973
64251 chr1 15988085 15988085 1 + C G LIHC 15988084 + 15988064 15988104 41 TCCACCATTGATTTTTCCTGCCACAGATATTGACCGCATTC TCCACCATTGATTTTTCCTGCGACAGATATTGACCGCATTC < 41bp 0.485578799376454 0.772483647208792 0.10563576 0.23616049 prediction 0.544967294417584 Functional Gain - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15988084 chr1:15988085 synonymous SNV . 0 22 hm5C_associated_SNPs_104703 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:15988073-15988087
64251 chr17 16120706 16120706 1 + T A STAD 16120702 + 16120682 16120722 41 GCGCACCCTGACGATGAAGCCATGTTTTTTGCTCCCACAGT GCGCACCCTGACGATGAAGCCATGATTTTTGCTCCCACAGT < 41bp 0.473250551080519 0.772470766448494 0.17123234 0.29385385 prediction 0.544941532896988 Functional Gain - PIGL ENSG00000108474 CDS Human protein_coding chr17:16120702 chr17:16120706 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_104704 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:16120700-16120720
64251 chr17 73267533 73267533 1 + C A rs571418032 73267529 + 73267509 73267549 41 CCGGGCCCACGCCGGACCCGCCGGCACCTCGATCTTGCGCG CCGGGCCCACGCCGGACCCGCCGGAACCTCGATCTTGCGCG < 41bp 0.599697322357875 0.872125218006433 0.20452109 0.37404573 prediction 0.544855791297116 Functional Gain - LOC100287042 ENSG00000263843 ncRNA_exonic Human antisense chr17:73267529 chr17:73267533 . . 0 25 hm5C_associated_SNPs_104707 0 0 1 DDX3X POSTAR2 ENCODE chr17:73267477-73267555
64251 chr1 1168115 1168115 1 + C A rs142820961 1168111 + 1168091 1168131 41 GAGCACGTGGCCTTCGAGTTCGTGCTCAAGGCGGACGACGA GAGCACGTGGCCTTCGAGTTCGTGATCAAGGCGGACGACGA < 41bp 0.613967353326842 0.886385795806998 0.0676108 0.10239148 prediction 0.544836884960312 Functional Gain - B3GALT6 ENSG00000176022 CDS Human protein_coding chr1:1168111 chr1:1168115 nonsynonymous SNV 0.988 1 25 hm5C_associated_SNPs_104708 1 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:1168079-1168120
64251 chr7 100799899 100799899 1 + C G LUAD 100799895 + 100799875 100799915 41 ATGCGGTTCATGCTATTATTCAGCCGGCAGGGAAAACTGCG ATGCGGTTCATGCTATTATTCAGCGGGCAGGGAAAACTGCG < 41bp 0.486697840465544 0.772393072131782 0.76798177 0.9243554 prediction 0.544786144263563 Functional Gain - AP1S1 ENSG00000106367 CDS Human protein_coding chr7:100799895 chr7:100799899 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_104714 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:100799880-100799900
64251 chr2 27887052 27887052 1 + C G SKCM 27887051 + 27887031 27887071 41 CCCCCGACAGCGGTTTCTTCCCCTGGCGGTCCAGCCCGGGC CCCCCGACAGCGGTTTCTTCCGCTGGCGGTCCAGCCCGGGC < 41bp 0.456825646099282 0.772377144664344 0.029978573 0.104595155 prediction 0.544754289328687 Functional Gain - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27887051 chr2:27887052 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_104717 0 0 1 RBM15 POSTAR2 ENCODE chr2:27887015-27887079
64251 chr6 43100368 43100368 1 + T A OV 43100364 + 43100344 43100384 41 GAAAGTGATGCTGGTGTCTACACCTGCCACGCGGCCAACCT GAAAGTGATGCTGGTGTCTACACCAGCCACGCGGCCAACCT < 41bp 0.444587840231171 0.772354458499552 0.14419141 0.41865766 prediction 0.544708916999104 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43100364 chr6:43100368 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_104723 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:43100346-43100379
64251 chr19 11486212 11486212 1 + C A UCEC 11486208 + 11486188 11486228 41 GAAGATCCGCTTCCAGTACCCACCCTCAACCCGAGAGCTTT GAAGATCCGCTTCCAGTACCCACCATCAACCCGAGAGCTTT < 41bp 0.372785516723109 0.772330432368444 0.029924512 0.041459084 prediction 0.544660864736888 Functional Gain - SWSAP1 ENSG00000173928 CDS Human protein_coding chr19:11486208 chr19:11486212 synonymous SNV . 0 25 hm5C_associated_SNPs_104725 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:11486130-11486212
64251 chr1 1407165 1407165 1 + C G rs140699979 1407164 + 1407144 1407184 41 TGTTTCGCCTGCGCAGTGGTCCTGGCCACCGGCTCGCGGCG TGTTTCGCCTGCGCAGTGGTCGTGGCCACCGGCTCGCGGCG < 41bp 0.477425942399118 0.772320696736685 0.70514673 0.9034955 prediction 0.544641393473371 Functional Gain - ATAD3B ENSG00000160072 UTR5 Human protein_coding chr1:1407164 chr1:1407165 . . 0 22 hm5C_associated_SNPs_104726 0 0 1 NCBP2 POSTAR2 ENCODE chr1:1407159-1407217
64251 chr12 58112867 58112867 1 + T C LIHC 58112865 + 58112845 58112885 41 ACATCCACTCTCAACAAACTCATCAAAAGACTGGAGGAAAA ACATCCACTCTCAACAAACTCACCAAAAGACTGGAGGAAAA < 41bp 0.511005559471647 0.783304072413717 0.44227272 0.33662465 prediction 0.544597025884138 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58112865 chr12:58112867 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_104730 0 0 17 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:58112824-58112872
64251 chr2 220379560 220379560 1 + C A rs3731909 220379556 + 220379536 220379576 41 CGGGGCTGTTGCCCCTGGAGCAGCCCCCCGAGACCTGGCCA CGGGGCTGTTGCCCCTGGAGCAGCACCCCGAGACCTGGCCA < 41bp 0.372132758335864 0.772286250009129 0.30313432 0.3378545 prediction 0.544572500018258 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379556 chr2:220379560 synonymous SNV . 0 25 hm5C_associated_SNPs_104732 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379542-220379620
64251 chr19 15807890 15807890 1 + C A LUSC 15807886 + 15807866 15807906 41 GTGGAGCCCCTGAATGTAAGCTTGCAGTGACTTTCTGACCC GTGGAGCCCCTGAATGTAAGCTTGAAGTGACTTTCTGACCC < 41bp 0.378898346774202 0.772217732652368 0.18528745 0.12296417 prediction 0.544435465304736 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807886 chr19:15807890 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_104739 0 0 1 LSM11 POSTAR2 ENCODE chr19:15807840-15807932
64251 chr6 155578174 155578174 1 - G T SARC 155578178 - 155578158 155578198 41 TAAACTCTGGACACTGAATTCTCGCTCTAGAACAGAATTTA TAAACTCTGGACACTGAATTCTCGATCTAGAACAGAATTTA < 41bp 0.63359634949822 0.905783941169138 0.050549358 0.26567817 prediction 0.544375183341834 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155578178 chr6:155578174 nonsynonymous SNV 0.969 1 25 hm5C_associated_SNPs_104741 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:155578148-155578193
64251 chr5 79950566 79950566 1 + C A LUAD 79950562 + 79950542 79950582 41 CTGCCATGTCTCGCCGGAAGCCTGCGTCGGGCGGCCTCGCT CTGCCATGTCTCGCCGGAAGCCTGAGTCGGGCGGCCTCGCT < 41bp 0.433316439347212 0.772181551441392 0.28928837 0.907362 prediction 0.544363102882785 Functional Gain - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79950562 chr5:79950566 nonsynonymous SNV 0.286 1 25 hm5C_associated_SNPs_104742 0 0 4 DDX3X POSTAR2 ENCODE chr5:79950487-79950624
64251 chr19 34263138 34263138 1 + C A LUSC 34263134 + 34263114 34263154 41 ACGCTGGATGGCCGCTGGGTCAGCCTGCACCGGAGCCAGCA ACGCTGGATGGCCGCTGGGTCAGCATGCACCGGAGCCAGCA < 41bp 0.629218598579022 0.901383420850115 0.077180475 0.050286233 prediction 0.544329644542186 Functional Gain - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34263134 chr19:34263138 nonsynonymous SNV 0.977 2 25 hm5C_associated_SNPs_104743 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34263128-34263188
64251 chr19 4345774 4345774 1 + C G rs200526614 4345770 + 4345750 4345790 41 GTTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATGTGGC GTTCCTGGGCGACCTGCAGCCAGAGGGAAGGATCATGTGGC < 41bp 0.519012131116886 0.791137858864159 0.87598014 0.90818024 prediction 0.544251455494547 Functional Gain - MPND ENSG00000008382 CDS Human protein_coding chr19:4345770 chr19:4345774 nonsynonymous SNV 0.523 4 25 hm5C_associated_SNPs_104746 0 0 2 BUD13 POSTAR2 ENCODE chr19:4345745-4345816
64251 chr10 105181309 105181309 1 + C G BRCA 105181305 + 105181285 105181325 41 GAGGAGCTGCAGGGCGTGCGCAGCCTTATGAGCAACCGAGG GAGGAGCTGCAGGGCGTGCGCAGCGTTATGAGCAACCGAGG < 41bp 0.518450802967735 0.790574421039675 0.3570119 0.7233369 prediction 0.544247236143881 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105181305 chr10:105181309 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_104747 0 0 2 FMR1 POSTAR2 ENCODE chr10:105181285-105181318
64251 chr6 155577880 155577880 1 - G T LUSC 155577884 - 155577864 155577904 41 AGTAGGGCTGCCCTGCTTCACAGTCTGACGGTGGTCATCAT AGTAGGGCTGCCCTGCTTCACAGTATGACGGTGGTCATCAT < 41bp 0.616372066811972 0.888439327887079 0.17901182 0.17689538 prediction 0.544134522150213 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577884 chr6:155577880 nonsynonymous SNV 0.220 0 25 hm5C_associated_SNPs_104752 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585672 chr6:155577867-155577885
64251 chr5 478554 478554 1 + C A rs368434950 478550 + 478530 478570 41 CCACACCACTTCCCCTGCCCCTGCCGAGCCCTGCCGTGGGG CCACACCACTTCCCCTGCCCCTGCAGAGCCCTGCCGTGGGG < 41bp 0.596174459210115 0.868227695103152 0.07336959 0.08406761 prediction 0.544106471786074 Functional Gain - SLC9A3-AS1 ENSG00000225138 ncRNA_exonic Human processed_transcript chr5:478550 chr5:478554 . . 0 25 hm5C_associated_SNPs_104756 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:478525-478554
64251 chr19 34833008 34833008 1 + C T SKCM 34833007 + 34832987 34833027 41 ACTGGCACCTCAGCAGCAGTCCCCAAAGCAGCAACAACCTC ACTGGCACCTCAGCAGCAGTCTCCAAAGCAGCAACAACCTC < 41bp 0.500160254031555 0.772178769523901 0.06834245 0.9661139 prediction 0.544037030984692 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34833007 chr19:34833008 synonymous SNV . 0 22 hm5C_associated_SNPs_104761 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:34832984-34833014
64251 chr3 49751566 49751566 1 + T A OV 49751562 + 49751542 49751582 41 GCTATACACGGCTGCCACATCTGCTGAAAACCAAACTTGAG GCTATACACGGCTGCCACATCTGCAGAAAACCAAACTTGAG < 41bp 0.430861469769588 0.771959998123526 0.24790585 0.3274101 prediction 0.543919996247052 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49751562 chr3:49751566 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_104767 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49751555-49751593
64251 chr3 51690054 51690054 1 + C T GBM 51690053 + 51690033 51690073 41 CCTGTGCAGTCCACCCCCATCCCCATGATGCCCCGGCATGT CCTGTGCAGTCCACCCCCATCTCCATGATGCCCCGGCATGT < 41bp 0.522467120842861 0.794401899166278 0.070699334 0.9526924 prediction 0.543869556646836 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51690053 chr3:51690054 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_104773 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:51690033-51690086
64251 chr5 180650537 180650537 1 + C A rs55879636 180650533 + 180650513 180650553 41 TCCCGCCCTGTTCTCTAGTGCGGACTAGAGCGTCTCCTCGC TCCCGCCCTGTTCTCTAGTGCGGAATAGAGCGTCTCCTCGC < 41bp 0.43251965080624 0.771868973072611 0.6136015 0.7110127 prediction 0.543737946145223 Functional Gain - TRIM41 ENSG00000146063 UTR5 Human protein_coding chr5:180650533 chr5:180650537 . . 0 25 hm5C_associated_SNPs_104780 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:180650529-180650554
64251 chrX 77373615 77373615 1 + T A KIRC 77373611 + 77373591 77373631 41 TTGATGAAGAAGGAGCTGAACTACTTTGCAAAGGCCTTGGA TTGATGAAGAAGGAGCTGAACTACATTGCAAAGGCCTTGGA < 41bp 0.59994199506846 0.871807465703838 0.08433035 0.45817 prediction 0.543730941270756 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77373611 chrX:77373615 nonsynonymous SNV 0.981 5 25 hm5C_associated_SNPs_104782 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:77373573-77373631
64251 chr15 59064095 59064095 1 + T G PRAD 59064093 + 59064073 59064113 41 GTTGCAGCGACCCGAGCCCTCCTGGGGAATCTCCGAGCCTG GTTGCAGCGACCCGAGCCCTCCGGGGGAATCTCCGAGCCTG < 41bp 0.611230529883468 0.88308031498297 0.8719618 0.92687136 prediction 0.543699570199005 Functional Gain - MINDY2 ENSG00000128923 CDS Human protein_coding chr15:59064093 chr15:59064095 synonymous SNV . 0 23 hm5C_associated_SNPs_104784 0 0 1 ZNF622 POSTAR2 ENCODE chr15:59064068-59064110
64251 chr20 49199609 49199609 1 + C A rs543779641 49199605 + 49199585 49199625 41 CCAGGCGGGCGGCACGCCAACAGCCCCCCCCTTGAATCTGC CCAGGCGGGCGGCACGCCAACAGCACCCCCCTTGAATCTGC < 41bp 0.633764381667879 0.90561119279416 0.050718546 0.05217126 prediction 0.543693622252561 Functional Gain - PTPN1 ENSG00000196396 UTR3 Human protein_coding chr20:49199605 chr20:49199609 . . 0 25 hm5C_associated_SNPs_104785 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:49199584-49199625
64251 chr3 101498114 101498114 1 + C A rs555572749 101498110 + 101498090 101498130 41 GCGGCCTGGCGCTGCGGCGACCGACCGGGGCGTCAGGATCC GCGGCCTGGCGCTGCGGCGACCGAACGGGGCGTCAGGATCC < 41bp 0.446787598764617 0.771814966841418 0.78219616 0.8965297 prediction 0.543629933682836 Functional Gain - NXPE3 ENSG00000144815 UTR5 Human protein_coding chr3:101498110 chr3:101498114 . . 0 25 hm5C_associated_SNPs_104788 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:101498100-101498120
64251 chr9 33295166 33295166 1 + C A LAML 33295162 + 33295142 33295182 41 GGAGGGGGCCAGGCCACGACCAGGCAGAAATCCACCAAAAC GGAGGGGGCCAGGCCACGACCAGGAAGAAATCCACCAAAAC < 41bp 0.644453238154367 0.916266267238758 0.8972529 0.9122461 prediction 0.543626058168782 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295162 chr9:33295166 synonymous SNV . 0 25 hm5C_associated_SNPs_104789 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221664 chr9:33295165-33295166
64251 chr10 89264929 89264929 1 + T G SKCM 89264927 + 89264907 89264947 41 ACCCCGGTGCAGCTGGTCGCCCTCATTCGCCACGGCACCCG ACCCCGGTGCAGCTGGTCGCCCGCATTCGCCACGGCACCCG < 41bp 0.601635624159424 0.873344146401177 0.02657631 0.03838262 prediction 0.543417044483508 Functional Gain - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89264927 chr10:89264929 nonsynonymous SNV 0.939 3 23 hm5C_associated_SNPs_104793 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:89264882-89264930
64251 chr1 155289612 155289612 1 + C T STAD 155289611 + 155289591 155289631 41 TACCTTGACCTCTTTGGGGACCCCAGTGTGACCGGCAAAAT TACCTTGACCTCTTTGGGGACTCCAGTGTGACCGGCAAAAT < 41bp 0.501264117023816 0.772959938220018 0.12546423 0.93026173 prediction 0.543391642392404 Functional Gain - FDPS ENSG00000160752 CDS Human protein_coding chr1:155289611 chr1:155289612 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_104795 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:155289588-155289639
64251 chr16 19132702 19132702 1 + C A rs9933536 19132698 + 19132678 19132718 41 ACTGTGTTTTTGGTTGCAGTCTGGCGGCTGCAGGCATAGCG ACTGTGTTTTTGGTTGCAGTCTGGAGGCTGCAGGCATAGCG < 41bp 0.470870291070282 0.771689010257523 0.26449254 0.36533076 prediction 0.543378020515047 Functional Gain - ITPRIPL2 ENSG00000261759 ncRNA_exonic Human antisense chr16:19132698 chr16:19132702 . . 0 25 hm5C_associated_SNPs_104797 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:19132683-19132710
64251 chr4 110415851 110415851 1 + T C COAD 110415849 + 110415829 110415869 41 TGCTTCTGCTCCAGCTCCAGCTTCAGCTCCAGCTCCTGTCG TGCTTCTGCTCCAGCTCCAGCTCCAGCTCCAGCTCCTGTCG < 41bp 0.491815598356781 0.771624045489264 0.0475519 0.47154006 prediction 0.543248090978528 Functional Gain - SEC24B ENSG00000138802 CDS Human protein_coding chr4:110415849 chr4:110415851 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_104800 0 0 5 IGF2BP1 POSTAR2 ENCODE chr4:110415848-110415993
64251 chr19 42396861 42396861 1 + C A OV 42396857 + 42396837 42396877 41 TTGGGTTGGGCGGGACCGAGCCAGCTACGAGGCCCGGGAGC TTGGGTTGGGCGGGACCGAGCCAGATACGAGGCCCGGGAGC < 41bp 0.420105220957206 0.771541557762961 0.8928535 0.89570534 prediction 0.543083115525922 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42396857 chr19:42396861 nonsynonymous SNV 0.137 3 25 hm5C_associated_SNPs_104807 0 0 10 BUD13 POSTAR2 ENCODE chr19:42396834-42396900
64251 chr11 118186305 118186305 1 + C A rs2231449 118186301 + 118186281 118186321 41 GCTGGCCCAGGTCTCCTCTCCAGTCCCCCTGCGACTCCCTG GCTGGCCCAGGTCTCCTCTCCAGTACCCCTGCGACTCCCTG < 41bp 0.397030943259881 0.771502483531462 0.32286742 0.07919791 prediction 0.543004967062924 Functional Gain - CD3E ENSG00000198851 UTR3 Human protein_coding chr11:118186301 chr11:118186305 . . 0 25 hm5C_associated_SNPs_104811 1 0 1 TBRG4 POSTAR2 ENCODE chr11:118186278-118186318
64251 chr5 179260153 179260153 1 + C G rs4935 179260149 + 179260129 179260169 41 ACAGCCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTG ACAGCCAAGCAGCTGCTGCTCTGAGCCCAGCAAGCCGGGTG < 41bp 0.475792328556797 0.771477461581898 0.25870246 0.28164572 prediction 0.542954923163797 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179260149 chr5:179260153 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_104812 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr5:179260142-179260163
64251 chr2 228680239 228680239 1 + T C UCEC 228680237 + 228680217 228680257 41 CATCCTAAATTTATTGTGGGCTTCACACGGCAGCTGGCCAA CATCCTAAATTTATTGTGGGCTCCACACGGCAGCTGGCCAA < 41bp 0.533980737408967 0.805448713698032 0.054059327 0.20039806 prediction 0.542935952578129 Functional Gain - CCL20 ENSG00000115009 CDS Human protein_coding chr2:228680237 chr2:228680239 nonsynonymous SNV 0.793 4 23 hm5C_associated_SNPs_104814 0 0 4 RPS3 POSTAR2 ENCODE chr2:228680232-228680270
64251 chr11 75280272 75280272 1 + T G rs143305212 75280270 + 75280250 75280290 41 CTTGGAGCCAGGGGGAGGTGCTTGGGGGACCCACTCACCAA CTTGGAGCCAGGGGGAGGTGCTGGGGGGACCCACTCACCAA < 41bp 0.589693797672366 0.861132883028907 0.85458034 0.9312264 prediction 0.542878170713084 Functional Gain - SERPINH1 ENSG00000149257 UTR3 Human protein_coding chr11:75280270 chr11:75280272 . . 0 23 hm5C_associated_SNPs_104818 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:75280248-75280301
64251 chr1 93811787 93811787 1 + C G rs568293928 93811786 + 93811766 93811806 41 TCGGGCTCTATAGAGCCGAGCCCGCTGGGTACCCGCCCGGT TCGGGCTCTATAGAGCCGAGCGCGCTGGGTACCCGCCCGGT < 41bp 0.503914420486817 0.775295636511299 0.3384878 0.6915863 prediction 0.542762432048965 Functional Gain - DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93811786 chr1:93811787 . . 0 22 hm5C_associated_SNPs_104823 0 0 10 RTCB POSTAR2 GSE38201,GSM936508 chr1:93811765-93811790
64251 chr21 45739585 45739585 1 + C G rs188068991 45739584 + 45739564 45739604 41 GCCCAGGACATGGGGTGGCCCCGCGGGGGCTGGGAAGGCTG GCCCAGGACATGGGGTGGCCCGGCGGGGGCTGGGAAGGCTG < 41bp 0.477663047708333 0.771310927633722 0.45475662 0.7806066 prediction 0.542621855267444 Functional Gain - PFKL ENSG00000141959 intronic Human protein_coding chr21:45739584 chr21:45739585 . . 0 22 hm5C_associated_SNPs_104827 0 0 35 AKAP8L POSTAR2 ENCODE chr21:45739520-45739591
64251 chr8 30977881 30977881 1 + T C rs3087432 30977879 + 30977859 30977899 41 AGGAGATTGGTAGAGCTGGTCGTGATGGACTTCAAAGTTCT AGGAGATTGGTAGAGCTGGTCGCGATGGACTTCAAAGTTCT < 41bp 0.526917336867855 0.798209505395365 0.29781407 0.2971261 prediction 0.54258433705502 Functional Gain - WRN ENSG00000165392 CDS Human protein_coding chr8:30977879 chr8:30977881 synonymous SNV . 0 23 hm5C_associated_SNPs_104828 1 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:30977849-30977889
64251 chrX 47045024 47045024 1 + C G BLCA 47045023 + 47045003 47045043 41 CACCAGCAGCTCTCAGGGCTCCACAAGGTAACAGCGGATGG CACCAGCAGCTCTCAGGGCTCGACAAGGTAACAGCGGATGG < 41bp 0.460824493885783 0.771287865880444 0.28825438 0.24411508 prediction 0.542575731760888 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47045023 chrX:47045024 nonsynonymous SNV 0.853 4 22 hm5C_associated_SNPs_104830 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:47044997-47045024
64251 chr16 69202770 69202770 1 + T G OV 69202767 + 69202747 69202787 41 GGATGAAAGAACACTCGTGGCAGTAGAACGGCCTCTGGATG GGATGAAAGAACACTCGTGGCAGGAGAACGGCCTCTGGATG < 41bp 0.624734230992438 0.895988237964893 0.22531688 0.7511436 prediction 0.542508013944911 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69202767 chr16:69202770 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_104836 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:69202735-69202785
64251 chr19 39423188 39423188 1 + C G OV 39423187 + 39423167 39423207 41 CGAGTGCGGCTCAGCACTGGCCGCGAGGCCGTCTGCTTCAT CGAGTGCGGCTCAGCACTGGCGGCGAGGCCGTCTGCTTCAT < 41bp 0.557833352983016 0.829083149891195 0.329131 0.87513417 prediction 0.54249959381636 Functional Gain - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423187 chr19:39423188 nonsynonymous SNV 0.447 0 22 hm5C_associated_SNPs_104837 0 0 4 DDX55 POSTAR2 ENCODE chr19:39423142-39423282
64251 chr7 102065581 102065581 1 + C G HNSC 102065577 + 102065557 102065597 41 GACAATGTTTGCCACAGCCTCTGCCTGGAACCTGGCTCGTG GACAATGTTTGCCACAGCCTCTGCGTGGAACCTGGCTCGTG < 41bp 0.513882332106936 0.785117317316261 0.13422656 0.24872875 prediction 0.54246997041865 Functional Gain - LOC100630923 ENSG00000128563 CDS Human protein_coding chr7:102065577 chr7:102065581 synonymous SNV . 0 25 hm5C_associated_SNPs_104841 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:102065560-102065590
64251 chr7 102553545 102553545 1 - A C rs114626804 102553548 - 102553528 102553568 41 AAGCTCATCTATCTGGACCTCTCTGGCTGCACCCAGGTTTG AAGCTCATCTATCTGGACCTCTCGGGCTGCACCCAGGTTTG < 41bp 0.393124855559924 0.771191438774175 0.12779626 0.14664727 prediction 0.54238287754835 Functional Gain - FBXL13 ENSG00000161040 CDS Human protein_coding chr7:102553548 chr7:102553545 synonymous SNV . 0 24 hm5C_associated_SNPs_104848 0 0 2 UCHL5 POSTAR2 ENCODE chr7:102553510-102553578
64251 chr22 25627595 25627595 1 + C G OV 25627591 + 25627571 25627611 41 GTGGGTTGGCTACCAGTACCCCGGCTACCGTGGGCTGCAGT GTGGGTTGGCTACCAGTACCCCGGGTACCGTGGGCTGCAGT < 41bp 0.496168643855072 0.771171048042451 0.32338732 0.9149709 prediction 0.542342096084903 Functional Gain - CRYBB2 ENSG00000244752 CDS Human protein_coding chr22:25627591 chr22:25627595 synonymous SNV . 0 25 hm5C_associated_SNPs_104850 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:25627588-25627620
64251 chr16 85645089 85645089 1 + C A rs534569279 85645085 + 85645065 85645105 41 CCGCCGGTGAGCTGGCGGGTCGTGCGGGGAAGCAGCACCCC CCGCCGGTGAGCTGGCGGGTCGTGAGGGGAAGCAGCACCCC < 41bp 0.554195830668922 0.825349862343001 0.89980274 0.90782785 prediction 0.542308063348158 Functional Gain - GSE1 ENSG00000131149 UTR5 Human protein_coding chr16:85645085 chr16:85645089 . . 0 25 hm5C_associated_SNPs_104851 0 0 26 AKAP8L POSTAR2 ENCODE chr16:85645049-85645118
64251 chr8 27530381 27530381 1 + C A rs146516200 27530377 + 27530357 27530397 41 CCCAACACGGACCCAGAGAGCAGCCCTTCCCTGCTCAAAGC CCCAACACGGACCCAGAGAGCAGCACTTCCCTGCTCAAAGC < 41bp 0.583248000456788 0.854374412352738 0.052648604 0.1036087 prediction 0.542252823791901 Functional Gain - SCARA3 ENSG00000168077 UTR3 Human protein_coding chr8:27530377 chr8:27530381 . . 0 25 hm5C_associated_SNPs_104853 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27530339-27530417
64251 chr11 43345053 43345053 1 + C A HNSC 43345049 + 43345029 43345069 41 TGTCTGGGTTAAAAAGCTTACAGACAGTGAGTGGAAGACAG TGTCTGGGTTAAAAAGCTTACAGAAAGTGAGTGGAAGACAG < 41bp 0.387625899106122 0.771120311103634 0.035488874 0.07969868 prediction 0.542240622207269 Functional Gain - API5 ENSG00000166181 CDS Human protein_coding chr11:43345049 chr11:43345053 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_104854 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr11:43345014-43345076
64251 chr16 28847312 28847312 1 + C A COAD 28847308 + 28847288 28847328 41 CCCCTCACCCTGGGGCTCCCCACCCGCCCCAGGTGATGCTG CCCCTCACCCTGGGGCTCCCCACCAGCCCCAGGTGATGCTG < 41bp 0.634721148887659 0.905835989991917 0.092215836 0.12887427 prediction 0.542229682208516 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847308 chr16:28847312 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_104855 0 0 3 HNRNPK POSTAR2 ENCODE chr16:28847264-28847341
64251 chr4 186350559 186350559 1 + C A rs6856909 186350555 + 186350535 186350575 41 GGTATAGAGAGTACCACCACCAGACGCCACCATGCCTGCGG GGTATAGAGAGTACCACCACCAGAAGCCACCATGCCTGCGG < 41bp 0.568645371219311 0.839743191870385 0.2723475 0.6340106 prediction 0.542195641302148 Functional Gain - C4orf47 ENSG00000205129 UTR5 Human protein_coding chr4:186350555 chr4:186350559 . . 0 25 hm5C_associated_SNPs_104856 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:186350523-186350574
64251 chr7 116146155 116146155 1 + C A GBM 116146151 + 116146131 116146171 41 GGACGATGCTTCTCTTCTGTCAGCCTGCAACTGAGCCAGGA GGACGATGCTTCTCTTCTGTCAGCATGCAACTGAGCCAGGA < 41bp 0.53112148182874 0.802200739094449 0.41492283 0.5619822 prediction 0.542158514531419 Functional Gain - CAV2 ENSG00000105971 CDS Human protein_coding chr7:116146151 chr7:116146155 nonsynonymous SNV 0.983 1 25 hm5C_associated_SNPs_104859 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116146096-116146165
64251 chr19 57839579 57839579 1 + C A LUAD 57839575 + 57839555 57839595 41 TTCTTCAGCACCTCATCATCCACACTGGGGAGAAGCCCTAT TTCTTCAGCACCTCATCATCCACAATGGGGAGAAGCCCTAT < 41bp 0.353687278041652 0.771069309915548 0.014560312 0.014880657 prediction 0.542138619831097 Functional Gain - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57839575 chr19:57839579 nonsynonymous SNV 0.857 3 25 hm5C_associated_SNPs_104861 0 0 1 ZNF622 POSTAR2 ENCODE chr19:57839560-57839617
64251 chr9 130549811 130549811 1 + C A rs34238383 130549807 + 130549787 130549827 41 TCTCACCCAGTTCCCCATTACAGCCTTGCGGGAGATCAAGA TCTCACCCAGTTCCCCATTACAGCATTGCGGGAGATCAAGA < 41bp 0.35211620499472 0.771062462269803 0.121130705 0.16510132 prediction 0.542124924539607 Functional Gain - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130549807 chr9:130549811 synonymous SNV . 0 25 hm5C_associated_SNPs_104864 0 0 8 DDX24 POSTAR2 ENCODE chr9:130549796-130549938
64251 chr10 12160849 12160849 1 + T A LAML 12160845 + 12160825 12160865 41 AGCATGACTTTGCCATCATCCGAGTAGAGGAACTCTGCCCC AGCATGACTTTGCCATCATCCGAGAAGAGGAACTCTGCCCC < 41bp 0.58418767447975 0.855247939982132 0.768007 0.84287167 prediction 0.542120531004764 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12160845 chr10:12160849 nonsynonymous SNV 0.908 1 25 hm5C_associated_SNPs_104866 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:12160846-12160881
64251 chr19 39963891 39963891 1 + C A MESO 39963887 + 39963867 39963907 41 GACCTCGACCTATGGGAGGACGCCCATGTATGGCTCCCAGA GACCTCGACCTATGGGAGGACGCCAATGTATGGCTCCCAGA < 41bp 0.346601280160096 0.771055935760642 0.13110352 0.88115895 prediction 0.542111871521285 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963887 chr19:39963891 synonymous SNV . 0 25 hm5C_associated_SNPs_104868 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39963865-39963911
64251 chr1 112002182 112002182 1 + T C UCEC 112002180 + 112002160 112002200 41 TATCATATATCTGTGCAGAACATGATGCGTCGAAAGGAACA TATCATATATCTGTGCAGAACACGATGCGTCGAAAGGAACA < 41bp 0.506682111722412 0.777688497177721 0.055931717 0.02465108 prediction 0.542012770910619 Functional Gain - ATP5F1 ENSG00000116459 CDS Human protein_coding chr1:112002180 chr1:112002182 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_104871 0 0 26 TARDBP POSTAR2 DRA001158,DRS012387 chr1:112002157-112002202
64251 chr1 154956225 154956225 1 + T G UCEC 154956222 + 154956202 154956242 41 AGAGGCAGGAACAAAGGAGTCGCTTGTCAAGGATCTGGTTA AGAGGCAGGAACAAAGGAGTCGCGTGTCAAGGATCTGGTTA < 41bp 0.397073263060574 0.770982777108444 0.12736449 0.39250717 prediction 0.541965554216888 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154956222 chr1:154956225 nonsynonymous SNV 0.114 1 24 hm5C_associated_SNPs_104874 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:154956201-154956227
64251 chr10 13151216 13151216 1 + C G LUAD 13151215 + 13151195 13151235 41 CCCCACCTGGCCCACCCAAACCTGGACACGTTTACCCCGGA CCCCACCTGGCCCACCCAAACGTGGACACGTTTACCCCGGA < 41bp 0.464346900075268 0.770948029044022 0.4043489 0.87444454 prediction 0.541896058088044 Functional Gain - OPTN ENSG00000123240 CDS Human protein_coding chr10:13151215 chr10:13151216 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_104878 0 0 2 GRWD1 POSTAR2 ENCODE chr10:13151201-13151268
64251 chr5 138163226 138163226 1 + T C DLBC 138163224 + 138163204 138163244 41 AAACAAATCATTGTGGACCCCTTGAGCTTCAGCGAGGAGCG AAACAAATCATTGTGGACCCCTCGAGCTTCAGCGAGGAGCG < 41bp 0.538037186238995 0.808959852770044 0.08825612 0.4052881 prediction 0.541845333062098 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138163224 chr5:138163226 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_104881 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:138163212-138163232
64251 chr6 10726190 10726190 1 + C A COAD 10726186 + 10726166 10726206 41 CTGCTCTTTGGCAGTCTAGCCGGCCTGGGTGCTTACCAGCT CTGCTCTTTGGCAGTCTAGCCGGCATGGGTGCTTACCAGCT < 41bp 0.644970709606658 0.915885948007007 0.6745941 0.8768221 prediction 0.541830476800698 Functional Gain - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10726186 chr6:10726190 nonsynonymous SNV 0.585 4 25 hm5C_associated_SNPs_104883 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr6:10726168-10726213
64251 chr16 2278405 2278405 1 + C G LGG 2278404 + 2278384 2278424 41 GTGCACAGATGCGGCCGCTGCCAGGCAGAGTTCACCGCCTT GTGCACAGATGCGGCCGCTGCGAGGCAGAGTTCACCGCCTT < 41bp 0.567927681093786 0.838841146279342 0.5467209 0.765658 prediction 0.541826930371111 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2278404 chr16:2278405 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_104885 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2278386-2278407
64251 chr17 78093353 78093353 1 + C G rs8132 78093352 + 78093332 78093372 41 TCCCTAGATCGCACTGTGGGCCGGGGCCCTGGAGGGCTGCT TCCCTAGATCGCACTGTGGGCGGGGGCCCTGGAGGGCTGCT < 41bp 0.518071616178174 0.788964343716935 0.8742437 0.8991124 prediction 0.541785455077523 Functional Gain - GAA ENSG00000171298 UTR3 Human protein_coding chr17:78093352 chr17:78093353 . . 0 22 hm5C_associated_SNPs_104889 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:78093326-78093386
64251 chr2 232011036 232011036 1 + T C LIHC 232011034 + 232011014 232011054 41 GCACTCATAGCTTCAGCTCTCATCATGATCCAGCAGACTGA GCACTCATAGCTTCAGCTCTCACCATGATCCAGCAGACTGA < 41bp 0.534217002116242 0.805002830495775 0.026316226 0.028691173 prediction 0.541571656759067 Functional Gain - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232011034 chr2:232011036 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_104898 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:232011007-232011036
64251 chr15 64422191 64422191 1 + T C UCEC 64422189 + 64422169 64422209 41 TTCAACAAAGCCACAGATGCCGTCAGCAAAATGACCATCAA TTCAACAAAGCCACAGATGCCGCCAGCAAAATGACCATCAA < 41bp 0.486416868798803 0.770769318136637 0.054855347 0.07719159 prediction 0.541538636273273 Functional Gain - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64422189 chr15:64422191 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_104901 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:64422188-64422218
64251 chr5 154193679 154193679 1 + T G rs548301464 154193677 + 154193657 154193697 41 AAAGCTCCTTAGCCCTGGGGCTTGAGGGGGGAAAGGGGTAG AAAGCTCCTTAGCCCTGGGGCTGGAGGGGGGAAAGGGGTAG < 41bp 0.448215880013726 0.770734322416389 0.74983746 0.7426561 prediction 0.541468644832777 Functional Gain - LARP1 ENSG00000155506 UTR3 Human protein_coding chr5:154193677 chr5:154193679 . . 0 23 hm5C_associated_SNPs_104906 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:154193660-154193686
64251 chr19 8322868 8322868 1 + C G SKCM 8322864 + 8322844 8322884 41 ACCCGACTGGTCCTCTTTCCCACCCAGTGAGTCAGCCCTCC ACCCGACTGGTCCTCTTTCCCACCGAGTGAGTCAGCCCTCC < 41bp 0.529748961265979 0.800451897537955 0.09158319 0.22532383 prediction 0.541405872543951 Functional Gain - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8322864 chr19:8322868 nonsynonymous SNV 0.223 1 25 hm5C_associated_SNPs_104909 0 0 4 LARP4 POSTAR2 ENCODE chr19:8322842-8322869
64251 chr15 100247002 100247002 1 + C A OV 100246998 + 100246978 100247018 41 TACCCCAGTCGTGTCTGTGACAACCCCAAGCTTGCCTCCGC TACCCCAGTCGTGTCTGTGACAACACCAAGCTTGCCTCCGC < 41bp 0.357710815247613 0.770696214239148 0.088893265 0.23528516 prediction 0.541392428478297 Functional Gain - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100246998 chr15:100247002 synonymous SNV . 0 25 hm5C_associated_SNPs_104912 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:100247000-100247027
64251 chr17 72764749 72764749 1 + C G rs199563744 72764748 + 72764728 72764768 41 AACGCAGCAGCAAACGGGCCCCGCAGATGGACTGGAGCAAG AACGCAGCAGCAAACGGGCCCGGCAGATGGACTGGAGCAAG < 41bp 0.47105220872949 0.770641741255377 0.07060683 0.39669177 prediction 0.541283482510754 Functional Gain - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72764748 chr17:72764749 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_104917 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:72764737-72764768
64251 chr11 86662538 86662538 1 - A G UCEC 86662540 - 86662520 86662560 41 TGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAG TGTTCAAAATTCGGTCAAATCTCCAAAAGGATGGGACAAAG < 41bp 0.482488204278226 0.770621281539432 0.3057412 0.975376 prediction 0.541242563078864 Functional Gain - FZD4 ENSG00000174804 CDS Human protein_coding chr11:86662540 chr11:86662538 synonymous SNV . 0 23 hm5C_associated_SNPs_104918 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:86662538-86662539
64251 chrX 153247910 153247910 1 + C G BLCA 153247906 + 153247886 153247926 41 TGGCCCGTGGCCTGGTGCCTCTACCTAGACCGCGGCTGGCG TGGCCCGTGGCCTGGTGCCTCTACGTAGACCGCGGCTGGCG < 41bp 0.482939009179933 0.770616065714909 0.2825244 0.5008798 prediction 0.541232131429818 Functional Gain - TMEM187 ENSG00000177854 CDS Human protein_coding chrX:153247906 chrX:153247910 nonsynonymous SNV 0.486 0 25 hm5C_associated_SNPs_104920 0 0 3 SND1 POSTAR2 ENCODE chrX:153247873-153247926
64251 chr12 51065097 51065097 1 + T G LUAD 51065095 + 51065075 51065115 41 AATTCAGGGATCGTCCACTTCTTCATCCGCATCTTCTACGC AATTCAGGGATCGTCCACTTCTGCATCCGCATCTTCTACGC < 41bp 0.576486980757367 0.847090292557604 0.17961085 0.5422057 prediction 0.541206623600474 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51065095 chr12:51065097 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_104923 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:51065087-51065107
64251 chr6 125584048 125584048 1 + C G PRAD 125584047 + 125584027 125584067 41 CCTCAGCTCCACGGCCCATGCCAGTGCCCAGAGCTTGGCAG CCTCAGCTCCACGGCCCATGCGAGTGCCCAGAGCTTGGCAG < 41bp 0.557451304145595 0.828014902211699 0.2984854 0.45824432 prediction 0.541127196132208 Functional Gain - TPD52L1 ENSG00000111907 CDS Human protein_coding chr6:125584047 chr6:125584048 synonymous SNV . 0 22 hm5C_associated_SNPs_104928 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:125584030-125584058
64251 chr3 101283723 101283723 1 + T G GBM 101283721 + 101283701 101283741 41 CTTCATAGGAAGAGAAATAACTTAACAATTTTGCAGAGATA CTTCATAGGAAGAGAAATAACTGAACAATTTTGCAGAGATA < 41bp 0.556497364146272 0.827043397677779 0.048459977 0.3247258 prediction 0.541092067063014 Functional Gain - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101283721 chr3:101283723 stopgain 0.149 0 23 hm5C_associated_SNPs_104931 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101283714-101283745
64251 chr16 2548372 2548372 1 + C A UCEC 2548368 + 2548348 2548388 41 CAGCCCCTTCTGCTGTTCTCCTCCCTGCAGCACGGGTACAG CAGCCCCTTCTGCTGTTCTCCTCCATGCAGCACGGGTACAG < 41bp 0.339469417849571 0.770543548999261 0.29606357 0.9370377 prediction 0.541087097998522 Functional Gain - TBC1D24 ENSG00000162065 CDS Human protein_coding chr16:2548368 chr16:2548372 nonsynonymous SNV 0.827 0 25 hm5C_associated_SNPs_104932 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:2548357-2548395
64251 chr15 23811185 23811185 1 + C A STAD 23811181 + 23811161 23811201 41 TCAGGAGGAGGAGCCTGGCCCAGTCCGTTGCCAAGCCGAAG TCAGGAGGAGGAGCCTGGCCCAGTACGTTGCCAAGCCGAAG < 41bp 0.39319340018902 0.770513678942978 0.38022444 0.4467944 prediction 0.541027357885956 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811181 chr15:23811185 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_104935 0 0 1 UCHL5 POSTAR2 ENCODE chr15:23811173-23811278
64251 chr15 71211475 71211475 1 + T C BRCA 71211473 + 71211453 71211493 41 TTTTAAGTCATGTTGATAATCTTAATGGGCTGGATTCACTA TTTTAAGTCATGTTGATAATCTCAATGGGCTGGATTCACTA < 41bp 0.476335180994206 0.770484048545854 0.19730294 0.7168179 prediction 0.540968097091709 Functional Gain - LRRC49 ENSG00000137821 CDS Human protein_coding chr15:71211473 chr15:71211475 synonymous SNV . 0 23 hm5C_associated_SNPs_104937 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:71211462-71211482
64251 chr17 80012452 80012452 1 + C G CESC 80012451 + 80012431 80012471 41 GCCCCCAGCCCTGGACACGGCCTGGGTGGAGGCCACGCGGA GCCCCCAGCCCTGGACACGGCGTGGGTGGAGGCCACGCGGA < 41bp 0.561299066662145 0.831759576898222 0.35094768 0.70356524 prediction 0.540921020472154 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012451 chr17:80012452 synonymous SNV . 0 22 hm5C_associated_SNPs_104941 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:80012444-80012469
64251 chr21 47660785 47660785 1 + T A HNSC 47660781 + 47660761 47660801 41 GACAAACACTGCGCCAAGAGCTCCTCAGCAGAAGCTCCTCG GACAAACACTGCGCCAAGAGCTCCACAGCAGAAGCTCCTCG < 41bp 0.416102536724606 0.770436636907208 0.1803599 0.7860724 prediction 0.540873273814416 Functional Gain - MCM3AP ENSG00000160294 CDS Human protein_coding chr21:47660781 chr21:47660785 nonsynonymous SNV 0.119 0 25 hm5C_associated_SNPs_104946 0 0 1 DDX3X POSTAR2 ENCODE chr21:47660747-47660810
64251 chr5 179193074 179193074 1 + C G KIRC 179193073 + 179193053 179193093 41 TTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTCC TTCCACACCTCTGGTCAGCCCGGGGCGGACAATCCCAGTCC < 41bp 0.455221817784112 0.770422850815974 0.73558503 0.9134862 prediction 0.540845701631947 Functional Gain - MAML1 ENSG00000161021 CDS Human protein_coding chr5:179193073 chr5:179193074 nonsynonymous SNV 0.015 0 22 hm5C_associated_SNPs_104948 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:179193020-179193099
64251 chr14 55529352 55529352 1 + C G UCEC 55529348 + 55529328 55529368 41 TGTTCCAGTTGGCAGATGCACTACCTGAACACTCCCCTGCC TGTTCCAGTTGGCAGATGCACTACGTGAACACTCCCCTGCC < 41bp 0.492834716602951 0.770388776683355 0.110839814 0.13953948 prediction 0.54077755336671 Functional Gain - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529348 chr14:55529352 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_104954 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:55529320-55529369
64251 chr19 35505160 35505160 1 + C G KIRP 35505159 + 35505139 35505179 41 CCTCCAGCCAGACAGTGACCCCGGTGGCTGAACCCCCGAGC CCTCCAGCCAGACAGTGACCCGGGTGGCTGAACCCCCGAGC < 41bp 0.567478539546976 0.837863398554844 0.7484242 0.9320447 prediction 0.540769718015736 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35505159 chr19:35505160 nonsynonymous SNV 0.830 2 22 hm5C_associated_SNPs_104955 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:35505155-35505172
64251 chr4 187130359 187130359 1 + C G rs35524919 187130358 + 187130338 187130378 41 CCAGCCTGAGCGGTTCTTCCCCGAGAATGCACAAGGGCGCC CCAGCCTGAGCGGTTCTTCCCGGAGAATGCACAAGGGCGCC < 41bp 0.5733264118488 0.843695201539992 0.55677843 0.93789554 prediction 0.540737579382384 Functional Gain - CYP4V2 ENSG00000145476;ENSG00000164344 CDS Human other chr4:187130358 chr4:187130359 synonymous SNV . 0 22 hm5C_associated_SNPs_104958 2 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:187130324-187130362
64251 chr6 126278157 126278157 1 + C G rs568451027 126278156 + 126278136 126278176 41 CAGGTGAACCGCAGCGCCGGCCTGGCCCCCGACTGTGAGGC CAGGTGAACCGCAGCGCCGGCGTGGCCCCCGACTGTGAGGC < 41bp 0.477605472827158 0.770365202789805 0.8281685 0.8891747 prediction 0.540730405579609 Functional Gain - HINT3 ENSG00000111911 CDS Human protein_coding chr6:126278156 chr6:126278157 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_104960 0 0 4 DDX3X POSTAR2 ENCODE chr6:126278154-126278224
64251 chr17 7188459 7188459 1 + C G rs8192702 7188455 + 7188435 7188475 41 GGACGCTCCATCTCCTGGGCCTGGCGGGCATGTGTGGCTGT GGACGCTCCATCTCCTGGGCCTGGGGGGCATGTGTGGCTGT < 41bp 0.485391141221617 0.77024522438629 0.5064181 0.866521 prediction 0.540490448772581 Functional Gain - SLC2A4 ENSG00000181856 CDS Human protein_coding chr17:7188455 chr17:7188459 nonsynonymous SNV 0.983 1 25 hm5C_associated_SNPs_104970 0 0 1 SND1 POSTAR2 ENCODE chr17:7188407-7188483
64251 chr1 28861871 28861871 1 + C G SKCM 28861867 + 28861847 28861887 41 CGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGG CGTGTGCCTGAGTTATTTGCCAACGGTGGTGGCCGGCAAGG < 41bp 0.520441836962075 0.79067559970055 0.4427111 0.8448862 prediction 0.54046752547695 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28861867 chr1:28861871 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_104971 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28861858-28861882
64251 chr4 120192569 120192569 1 + T C LIHC 120192567 + 120192547 120192587 41 AAGGAAAAGGATCATATAAACATGACCGAGTTGTACCTCAG AAGGAAAAGGATCATATAAACACGACCGAGTTGTACCTCAG < 41bp 0.502186356675895 0.772369671970463 0.04512286 0.10366121 prediction 0.540366630589137 Functional Gain - USP53 ENSG00000145390 CDS Human protein_coding chr4:120192567 chr4:120192569 synonymous SNV . 0 23 hm5C_associated_SNPs_104975 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr4:120192556-120192570
64251 chr9 131873638 131873638 1 + T G rs3124501 131873635 + 131873615 131873655 41 GCACTGACATGGCCGTCGCCCGGTTCCGCGCGTCCGCCGCG GCACTGACATGGCCGTCGCCCGGGTCCGCGCGTCCGCCGCG < 41bp 0.621206530346412 0.891354815595921 0.7961196 0.91002303 prediction 0.540296570499019 Functional Gain - PTPA ENSG00000119383 UTR5 Human protein_coding chr9:131873635 chr9:131873638 . . 0 24 hm5C_associated_SNPs_104979 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:131873620-131873640
64251 chr1 36788023 36788023 1 + C A rs200217271 36788019 + 36787999 36788039 41 AGGATCCGTTCGCGCTCCTCCAGCCGCTGCGCCCGCTCCAG AGGATCCGTTCGCGCTCCTCCAGCAGCTGCGCCCGCTCCAG < 41bp 0.63480053205959 0.904935935869202 0.4359545 0.42082474 prediction 0.540270807619224 Functional Gain - EVA1B ENSG00000142694 CDS Human protein_coding chr1:36788019 chr1:36788023 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_104981 0 0 1 SLTM POSTAR2 ENCODE chr1:36788023-36788053
64251 chr16 90109969 90109969 1 + C G rs116336371 90109968 + 90109948 90109988 41 GTCGCTCCCTTCCCTGGGTGCCGCACGTCCAGCCTGTGTCC GTCGCTCCCTTCCCTGGGTGCGGCACGTCCAGCCTGTGTCC < 41bp 0.468798025197154 0.770134197294512 0.21879554 0.56479394 prediction 0.540268394589024 Functional Gain - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90109968 chr16:90109969 . . 0 22 hm5C_associated_SNPs_104982 0 0 1 DGCR8 POSTAR2 ENCODE chr16:90109938-90109969
64251 chr11 57509108 57509108 1 + T G COAD 57509105 + 57509085 57509125 41 GAAGCGTAAGGCTGAGGCCGCGGTGGTCGCCGTAGCCGAGA GAAGCGTAAGGCTGAGGCCGCGGGGGTCGCCGTAGCCGAGA < 41bp 0.629258144565767 0.89938678650529 0.79983413 0.9094503 prediction 0.540257283879046 Functional Gain - SELENOH ENSG00000211450 CDS Human protein_coding chr11:57509105 chr11:57509108 unknown 0.001 0 24 hm5C_associated_SNPs_104983 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:57509001-57509110
64251 chr5 167850751 167850751 1 + C G LUAD 167850747 + 167850727 167850767 41 GGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCATCC GGCCACCGGCTTCCGGCCCTCAGGGTGCATCACCACCATCC < 41bp 0.540395597340171 0.810449966398015 0.91615367 0.9458045 prediction 0.540108738115689 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850747 chr5:167850751 synonymous SNV . 0 25 hm5C_associated_SNPs_104992 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:167850732-167850764
64251 chr11 82877716 82877716 1 + T A PRAD 82877712 + 82877692 82877732 41 GTAGAAAACTGGCAAAGTTCCAAGTCTGCCAAAAGATGGAA GTAGAAAACTGGCAAAGTTCCAAGACTGCCAAAAGATGGAA < 41bp 0.454668242571851 0.770037135045862 0.3823567 0.33989936 prediction 0.540074270091724 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82877712 chr11:82877716 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_104994 0 0 1 UCHL5 POSTAR2 ENCODE chr11:82877709-82877736
64251 chr9 116241803 116241803 1 + C G SKCM 116241802 + 116241782 116241822 41 CTGTCCATTGATGCCCAGGACCGGGTTCTGCTGCTTCACAG CTGTCCATTGATGCCCAGGACGGGGTTCTGCTGCTTCACAG < 41bp 0.48805322315072 0.770010072746976 0.7420807 0.87579715 prediction 0.540020145493952 Functional Gain - RGS3 ENSG00000138835 CDS Human protein_coding chr9:116241802 chr9:116241803 nonsynonymous SNV 0.951 2 22 hm5C_associated_SNPs_104998 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:116241790-116241821
64251 chr10 71266923 71266923 1 + T A rs11068 71266919 + 71266899 71266939 41 AGGGAGCAGAGCCTGGGCCTCCCCTAAGAGGCTTTCCCCGA AGGGAGCAGAGCCTGGGCCTCCCCAAAGAGGCTTTCCCCGA < 41bp 0.567048637386329 0.837058446540249 0.2712357 0.5510651 prediction 0.54001961830784 Functional Gain - TSPAN15 ENSG00000099282 UTR3 Human protein_coding chr10:71266919 chr10:71266923 . . 0 25 hm5C_associated_SNPs_104999 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:71266874-71266931
64251 chr12 65672558 65672558 1 + C A rs182726780 65672554 + 65672534 65672574 41 CTGCCTGGCCTTTCCATGAGCCCGCGGCGGACCCTCCCGCG CTGCCTGGCCTTTCCATGAGCCCGAGGCGGACCCTCCCGCG < 41bp 0.618646782273235 0.888627813518592 0.34559357 0.44498372 prediction 0.539962062490713 Functional Gain - MSRB3 ENSG00000174099 CDS Human protein_coding chr12:65672554 chr12:65672558 synonymous SNV . 0 25 hm5C_associated_SNPs_105004 1 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:65672540-65672560
64251 chr17 74722939 74722939 1 + C G rs577498542 74722935 + 74722915 74722955 41 CCCATCACTTCCGGTCGCGCCAGCCGCCCGTTGCCAGTTCT CCCATCACTTCCGGTCGCGCCAGCGGCCCGTTGCCAGTTCT < 41bp 0.500657389037797 0.770574461749113 0.43716282 0.8492118 prediction 0.539834145422634 Functional Gain - METTL23 ENSG00000181038 UTR5 Human protein_coding chr17:74722935 chr17:74722939 . . 0 25 hm5C_associated_SNPs_105017 0 0 2 DDX3X POSTAR2 ENCODE chr17:74722921-74722971
64251 chr19 11547248 11547248 1 + C G LUSC 11547244 + 11547224 11547264 41 GATGAGTCCAAGCCTTTCACCTGCCTGGACGGTTCGGCCAC GATGAGTCCAAGCCTTTCACCTGCGTGGACGGTTCGGCCAC < 41bp 0.541963702778815 0.811860854374918 0.026226252 0.03182116 prediction 0.539794303192206 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11547244 chr19:11547248 nonsynonymous SNV 0.492 3 25 hm5C_associated_SNPs_105021 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:11547200-11547280
64251 chr19 49376525 49376525 1 + C G OV 49376524 + 49376504 49376544 41 AAGCACCCCATCAGGCTACCCCGTGGAGGGATGCCCACCCT AAGCACCCCATCAGGCTACCCGGTGGAGGGATGCCCACCCT < 41bp 0.455311140914629 0.769890784923686 0.24753705 0.852702 prediction 0.539781569847372 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376524 chr19:49376525 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_105022 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163974 chr19:49376525-49376526
64251 chr6 26252211 26252211 1 + C G UCEC 26252210 + 26252190 26252230 41 TGGGGAACTGGCCAAGCACGCCGTGTCCGAGGGCACTAAGG TGGGGAACTGGCCAAGCACGCGGTGTCCGAGGGCACTAAGG < 41bp 0.484225707917945 0.769857343821439 0.7970928 0.90873134 prediction 0.539714687642878 Functional Gain - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252210 chr6:26252211 synonymous SNV . 0 22 hm5C_associated_SNPs_105026 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:26252194-26252225
64251 chr13 114292034 114292034 1 + C A UCEC 114292030 + 114292010 114292050 41 AGGATATCCGGAAGCTTCTACAGCCGTCTGTCCTGTGGAAC AGGATATCCGGAAGCTTCTACAGCAGTCTGTCCTGTGGAAC < 41bp 0.370839846598847 0.76983782517107 0.5277995 0.7400434 prediction 0.539675650342139 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292030 chr13:114292034 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_105030 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:114291991-114292035
64251 chrX 152914771 152914771 1 + T G ESCA 152914768 + 152914748 152914788 41 TGCCGGCTCCAGCATGGCGCCGGTGCCCGGTCCAGTGCCCG TGCCGGCTCCAGCATGGCGCCGGGGCCCGGTCCAGTGCCCG < 41bp 0.369805796282963 0.769830566503505 0.36554444 0.73374164 prediction 0.53966113300701 Functional Gain - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914768 chrX:152914771 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_105031 0 0 2 RPS3 POSTAR2 ENCODE chrX:152914726-152914801
64251 chr19 34949770 34949770 1 + C A SARC 34949766 + 34949746 34949786 41 AATTGTTATGTATGTGCCAGCAAGCCAGAGGTGACTGTGCG AATTGTTATGTATGTGCCAGCAAGACAGAGGTGACTGTGCG < 41bp 0.369328607645372 0.76980856595986 0.18713942 0.20798531 prediction 0.53961713191972 Functional Gain - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34949766 chr19:34949770 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_105037 0 0 34 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:34949769-34949790
64251 chr4 77228006 77228006 1 + C A rs1053464 77228002 + 77227982 77228022 41 TTGGCTGCTGCGGGGCGGCCCTGGCGACACCGGGAAGGACG TTGGCTGCTGCGGGGCGGCCCTGGAGACACCGGGAAGGACG < 41bp 0.623284164738381 0.893056511996971 0.77135456 0.78562117 prediction 0.53954469451718 Functional Gain - STBD1 ENSG00000118804 CDS Human protein_coding chr4:77228002 chr4:77228006 synonymous SNV . 0 25 hm5C_associated_SNPs_105042 0 0 1 DDX3X POSTAR2 ENCODE chr4:77227979-77228024
64251 chr11 126225632 126225632 1 + C G rs534154324 126225631 + 126225611 126225651 41 CCCGCGCCCGGGACAGGGACCCGGCCGAGTCGAGCCGTCGC CCCGCGCCCGGGACAGGGACCGGGCCGAGTCGAGCCGTCGC < 41bp 0.530654280892803 0.800409289765337 0.896191 0.91868913 prediction 0.539510017745068 Functional Gain - ST3GAL4 ENSG00000110080 UTR5 Human protein_coding chr11:126225631 chr11:126225632 . . 0 22 hm5C_associated_SNPs_105043 0 0 1 DDX3X POSTAR2 ENCODE chr11:126225629-126225723
64251 chr1 109780612 109780612 1 + C G rs11547492 109780611 + 109780591 109780631 41 GCACCCATTCATCCCCCTGCCCCCATCTGACTGCGTAGCTG GCACCCATTCATCCCCCTGCCGCCATCTGACTGCGTAGCTG < 41bp 0.524770430519283 0.794414216597345 0.11746046 0.46881548 prediction 0.539287572156123 Functional Gain - SARS ENSG00000031698 UTR3 Human protein_coding chr1:109780611 chr1:109780612 . . 0 22 hm5C_associated_SNPs_105055 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:109780540-109780620
64251 chr16 69965751 69965751 1 + T C COAD 69965749 + 69965729 69965769 41 CTGCGCCGCCGGCTCTACATCATCATGCGTGGCGAGGAGGG CTGCGCCGCCGGCTCTACATCACCATGCGTGGCGAGGAGGG < 41bp 0.549606704664153 0.819238729220981 0.065858155 0.08395165 prediction 0.539264049113657 Functional Gain - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69965749 chr16:69965751 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_105056 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:69965733-69965754
64251 chr14 39650381 39650381 1 + T A SKCM 39650377 + 39650357 39650397 41 CCCCAGCTTCAGCTTCAATCCCAGTCCCAACCAGTACTCCA CCCCAGCTTCAGCTTCAATCCCAGACCCAACCAGTACTCCA < 41bp 0.462930728739467 0.769621269758564 0.34282577 0.31909612 prediction 0.539242539517128 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650377 chr14:39650381 nonsynonymous SNV 0.342 0 25 hm5C_associated_SNPs_105057 0 0 27 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:39650335-39650439
64251 chr12 69995119 69995119 1 + C A UCEC 69995115 + 69995095 69995135 41 ACCCCTGTTAAGCATTCCCACGTGCTGTCGATCTTTGGACC ACCCCTGTTAAGCATTCCCACGTGATGTCGATCTTTGGACC < 41bp 0.376706681207942 0.769605908822093 0.39126623 0.45579445 prediction 0.539211817644187 Functional Gain - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995115 chr12:69995119 nonsynonymous SNV 0.126 1 25 hm5C_associated_SNPs_105059 0 0 34 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:69995080-69995160
64251 chr17 41064737 41064737 1 + C A rs161620 41064733 + 41064713 41064753 41 CTGGGCTCAAGCAGTCCTCCCACCCTACCACAGCGTCCCGC CTGGGCTCAAGCAGTCCTCCCACCATACCACAGCGTCCCGC < 41bp 0.404304479647493 0.769604568896523 0.10465816 0.21242282 prediction 0.539209137793045 Functional Gain - G6PC ENSG00000131482 UTR3 Human protein_coding chr17:41064733 chr17:41064737 . . 0 25 hm5C_associated_SNPs_105060 1 0 3 IGF2BP1 POSTAR2 ENCODE chr17:41064704-41064783
64251 chr22 30766362 30766362 1 - G T UCEC 30766366 - 30766346 30766386 41 TTCAGGGCTCCTGGCTGGCTCGCCCTTGGTGGTGGGCTTGG TTCAGGGCTCCTGGCTGGCTCGCCATTGGTGGTGGGCTTGG < 41bp 0.368915881437784 0.769580791336415 0.16258079 0.91929483 prediction 0.539161582672831 Functional Gain - CCDC157 ENSG00000187860 CDS Human protein_coding chr22:30766366 chr22:30766362 nonsynonymous SNV 0.959 1 25 hm5C_associated_SNPs_105065 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:30766360-30766380
64251 chr19 46375466 46375466 1 + C G UCEC 46375465 + 46375445 46375485 41 CCTCAGGACCCCTGGCACCCCCAGCACCTGCAGCCCCCCTG CCTCAGGACCCCTGGCACCCCGAGCACCTGCAGCCCCCCTG < 41bp 0.557891851450177 0.827468832920221 0.18338197 0.47648674 prediction 0.539153962940088 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375465 chr19:46375466 nonsynonymous SNV 0.664 1 22 hm5C_associated_SNPs_105067 0 0 2 DDX6 POSTAR2 ENCODE chr19:46375458-46375519
64251 chr1 243480092 243480092 1 + T G LGG 243480090 + 243480070 243480110 41 TTGATGTCTGCACTAGTTTCCGTAAGGAGCAGCTTGGCAGA TTGATGTCTGCACTAGTTTCCGGAAGGAGCAGCTTGGCAGA < 41bp 0.444944586381148 0.769571237390094 0.28772318 0.891802 prediction 0.539142474780187 Functional Gain - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243480090 chr1:243480092 nonsynonymous SNV 0.364 2 23 hm5C_associated_SNPs_105068 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:243480080-243480100
64251 chr3 122128615 122128615 1 + C A UCEC 122128611 + 122128591 122128631 41 CCAAAGACACGAGACTTTAACAAGCTTGAACTTAGAAAAGA CCAAAGACACGAGACTTTAACAAGATTGAACTTAGAAAAGA < 41bp 0.623699149275604 0.893241376645208 0.76284873 0.87505174 prediction 0.539084454739207 Functional Gain - FAM162A ENSG00000114023 CDS Human protein_coding chr3:122128611 chr3:122128615 nonsynonymous SNV 0.834 0 25 hm5C_associated_SNPs_105071 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:122128601-122128621
64251 chr16 2650389 2650389 1 + C G rs545819504 2650385 + 2650365 2650405 41 GCGGAGGGAGGCTGTGGTCGCTGCCGGCCTAGGTGTCCCAG GCGGAGGGAGGCTGTGGTCGCTGCGGGCCTAGGTGTCCCAG < 41bp 0.529214670209306 0.79875395336851 0.2189449 0.37030533 prediction 0.539078566318408 Functional Gain - PDPK1 ENSG00000140992 UTR3 Human protein_coding chr16:2650385 chr16:2650389 . . 0 25 hm5C_associated_SNPs_105072 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr16:2650363-2650394
64251 chr1 51435058 51435058 1 + C A rs566197908 51435054 + 51435034 51435074 41 AGCCGCAATGCTGCCGCGAGCTGCCCCAGCAGTCCGGGCTC AGCCGCAATGCTGCCGCGAGCTGCACCAGCAGTCCGGGCTC < 41bp 0.559359560414365 0.828878651167767 0.06793493 0.13765368 prediction 0.539038181506805 Functional Gain - CDKN2C ENSG00000123080 UTR5 Human protein_coding chr1:51435054 chr1:51435058 . . 0 25 hm5C_associated_SNPs_105074 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:51435038-51435069
64251 chr2 10008516 10008516 1 + C G DLBC 10008515 + 10008495 10008535 41 GCGGAGTCTCAGTCTGACATCCACACTCGAAAACCTTTCCC GCGGAGTCTCAGTCTGACATCGACACTCGAAAACCTTTCCC < 41bp 0.551383439029361 0.820892496538788 0.047044337 0.09872621 prediction 0.539018115018853 Functional Gain - TAF1B ENSG00000115750 CDS Human protein_coding chr2:10008515 chr2:10008516 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_105075 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:10008490-10008535
64251 chr16 68279354 68279354 1 + C G OV 68279353 + 68279333 68279373 41 GGCCTCCACCTCCGCCCCTACCGTGTGGGGCTGCTCCCGGA GGCCTCCACCTCCGCCCCTACGGTGTGGGGCTGCTCCCGGA < 41bp 0.46416962354409 0.769459817831786 0.4312517 0.7884613 prediction 0.538919635663571 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68279353 chr16:68279354 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_105081 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:68279354-68279355
64251 chr10 134219126 134219126 1 + C G rs374025458 134219125 + 134219105 134219145 41 GCCCTGTGCGGACGGCCCTGCCGGTGGGCTGGCGGACTTGT GCCCTGTGCGGACGGCCCTGCGGGTGGGCTGGCGGACTTGT < 41bp 0.464460747503693 0.769433654811496 0.7836239 0.89662457 prediction 0.538867309622992 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219125 chr10:134219126 synonymous SNV . 0 22 hm5C_associated_SNPs_105085 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:134219112-134219135
64251 chr3 32932471 32932471 1 + C G LIHC 32932467 + 32932447 32932487 41 GCAGCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGC GCAGCTACGTGGGCATTGGGCTCCGGGGCCTGAGCTTCGGC < 41bp 0.517362906262543 0.786766136395176 0.24838462 0.3857381 prediction 0.538806460265266 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932467 chr3:32932471 nonsynonymous SNV 0.923 3 25 hm5C_associated_SNPs_105087 0 0 3 EIF3H POSTAR2 ENCODE chr3:32932453-32932544
64251 chr3 41280772 41280772 1 + T C SKCM 41280770 + 41280750 41280790 41 GATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCC GATCTGGGGCATGCCCAGGACCCCATGGATGGGCTGCCTCC < 41bp 0.516982829701158 0.786378641746836 0.2465558 0.26369417 prediction 0.538791624091357 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41280770 chr3:41280772 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_105088 0 0 30 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:41280700-41280780
64251 chr1 1334993 1334993 1 + C A rs185071634 1334989 + 1334969 1335009 41 GAGCGCCTGCCTGTGCGCCCCGAGCGGGGCTGGGACTCTTC GAGCGCCTGCCTGTGCGCCCCGAGAGGGGCTGGGACTCTTC < 41bp 0.620408114414684 0.889785001738163 0.2534482 0.87293684 prediction 0.538753774646957 Functional Gain - LOC148413 ENSG00000224870 CDS Human processed_transcript chr1:1334989 chr1:1334993 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_105090 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:1334966-1335004
64251 chr2 228190002 228190002 1 + C G rs7562498 228190001 + 228189981 228190021 41 CGCGCCTTTCGCGCTTCTGCCCTGGCCCTCTGCGGGCCGCT CGCGCCTTTCGCGCTTCTGCCGTGGCCCTCTGCGGGCCGCT < 41bp 0.519778759843011 0.789153451187382 0.3525221 0.848639 prediction 0.538749382688741 Functional Gain - MFF ENSG00000168958 UTR5 Human protein_coding chr2:228190001 chr2:228190002 . . 0 22 hm5C_associated_SNPs_105091 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:228190000-228190040
64251 chr12 3394331 3394331 1 + C G rs557677731 3394330 + 3394310 3394350 41 AGCCGCCTCCGCAGGAACCCCCAAAGTGCAGATTCCGGAGC AGCCGCCTCCGCAGGAACCCCGAAAGTGCAGATTCCGGAGC < 41bp 0.491002848669038 0.769350786563625 0.2611167 0.2083067 prediction 0.538701573127251 Functional Gain - TSPAN9 ENSG00000011105 UTR3 Human protein_coding chr12:3394330 chr12:3394331 . . 0 22 hm5C_associated_SNPs_105097 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:3394261-3394331
64251 chr9 116038032 116038032 1 + C A GBM 116038028 + 116038008 116038048 41 GGCTCCAGAGCCCAGCATGGCTTCCTCGCGAGCCTCTTCCA GGCTCCAGAGCCCAGCATGGCTTCATCGCGAGCCTCTTCCA < 41bp 0.371326608324059 0.76934794484021 0.11430004 0.09161252 prediction 0.538695889680419 Functional Gain - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116038028 chr9:116038032 synonymous SNV . 0 25 hm5C_associated_SNPs_105099 0 0 2 DDX3X POSTAR2 ENCODE chr9:116037967-116038052
64251 chr3 101311503 101311503 1 + T C UCEC 101311501 + 101311481 101311521 41 ACATCAGCTGGACCAAACTCCTTCAATAAAGGAAAGCATGG ACATCAGCTGGACCAAACTCCTCCAATAAAGGAAAGCATGG < 41bp 0.500651044190775 0.769986741563674 0.28178722 0.96668327 prediction 0.538671394745799 Functional Gain - PCNP ENSG00000081154 CDS Human protein_coding chr3:101311501 chr3:101311503 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_105101 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:101311491-101311549
64251 chr14 105965446 105965446 1 + T A rs185093200 105965442 + 105965422 105965462 41 GGGGCTGGGCTGACTCTGGCCGGATCCCAGGCCTGTGGCTA GGGGCTGGGCTGACTCTGGCCGGAACCCAGGCCTGTGGCTA < 41bp 0.512935102081371 0.782205278284877 0.8744683 0.83476716 prediction 0.538540352407011 Functional Gain - C14orf80 ENSG00000185347 UTR3 Human protein_coding chr14:105965442 chr14:105965446 . . 0 25 hm5C_associated_SNPs_105108 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105965433-105965495
64251 chr13 114150029 114150029 1 + C G rs200574898 114150025 + 114150005 114150045 41 CGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGT CGCGGGCGAGGGGTGGCTGCCATGGAGAGCCGGCAGTGGGT < 41bp 0.52835415057933 0.797583259917379 0.07507011 0.14667931 prediction 0.538458218676098 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150025 chr13:114150029 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_105111 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114150006-114150036
64251 chr9 115600856 115600856 1 + T C UCEC 115600854 + 115600834 115600874 41 GAGGGTGAGCTGGCTGAACCCCTGGAGGGTGTGTCAGCTTG GAGGGTGAGCTGGCTGAACCCCCGGAGGGTGTGTCAGCTTG < 41bp 0.518295181354514 0.787523830174332 0.29890355 0.34615773 prediction 0.538457297639637 Functional Gain - SNX30 ENSG00000148158 CDS Human protein_coding chr9:115600854 chr9:115600856 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_105112 0 0 1 ZNF622 POSTAR2 ENCODE chr9:115600777-115600872
64251 chr7 102584809 102584809 1 + C A UCEC 102584805 + 102584785 102584825 41 AGATGTGACTACAACATTCACTACCTCTACTACTGGTTAAA AGATGTGACTACAACATTCACTACATCTACTACTGGTTAAA < 41bp 0.354342045355329 0.769207093808925 0.032775313 0.18141317 prediction 0.53841418761785 Functional Gain - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102584805 chr7:102584809 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_105114 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:102584790-102584828
64251 chr3 31674465 31674465 1 + T C HNSC 31674463 + 31674443 31674483 41 CCCCAGGTTTTGACCGAACACGTAATGCTGAGATTGGAAAT CCCCAGGTTTTGACCGAACACGCAATGCTGAGATTGGAAAT < 41bp 0.53297730191378 0.802163244172993 0.16600141 0.13011256 prediction 0.538371884518426 Functional Gain - STT3B ENSG00000163527 CDS Human protein_coding chr3:31674463 chr3:31674465 synonymous SNV . 0 23 hm5C_associated_SNPs_105117 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr3:31674433-31674474
64251 chr6 41900375 41900375 1 + C G rs149587548 41900374 + 41900354 41900394 41 GCCCCATCCACAGCTATCGCCCGAAATCAGGCGTGAGCTTC GCCCCATCCACAGCTATCGCCGGAAATCAGGCGTGAGCTTC < 41bp 0.463671052271695 0.769168928526734 0.37600985 0.835091 prediction 0.538337857053468 Functional Gain - BYSL ENSG00000112578 CDS Human protein_coding chr6:41900374 chr6:41900375 synonymous SNV . 0 22 hm5C_associated_SNPs_105118 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:41900360-41900380
64251 chr16 20838467 20838467 1 + T C rs141772223 20838465 + 20838445 20838485 41 AGTTAAAAGCACTGCTTCCTCCTGATGCTGTGTTAGTGGGC AGTTAAAAGCACTGCTTCCTCCCGATGCTGTGTTAGTGGGC < 41bp 0.518512077724496 0.787645496198339 0.11234513 0.093972534 prediction 0.538266836947688 Functional Gain - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20838465 chr16:20838467 synonymous SNV . 0 23 hm5C_associated_SNPs_105121 0 0 1 DDX24 POSTAR2 ENCODE chr16:20838428-20838489
64251 chr12 6954905 6954905 1 - A T ACC 6954909 - 6954889 6954929 41 GTTGAAGTCGTCGTAGCCAGCGAATAGTAGGCGGCCACTGA GTTGAAGTCGTCGTAGCCAGCGAAAAGTAGGCGGCCACTGA < 41bp 0.561265353067303 0.830383141143673 0.468519 0.27718443 prediction 0.53823557615274 Functional Gain - GNB3 ENSG00000111664 CDS Human protein_coding chr12:6954909 chr12:6954905 synonymous SNV . 0 25 hm5C_associated_SNPs_105125 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:6954894-6954930
64251 chr7 128509460 128509460 1 + C G rs115979874 128509459 + 128509439 128509479 41 CGCTAAGCTCGGCCCCTGCCCCGCGCAGGCTCCTTGTGGCC CGCTAAGCTCGGCCCCTGCCCGGCGCAGGCTCCTTGTGGCC < 41bp 0.556811783573595 0.825928387864681 0.4704322 0.8891885 prediction 0.538233208582171 Functional Gain - LOC100130705 ENSG00000135253 ncRNA_intronic Human protein_coding chr7:128509459 chr7:128509460 . . 0 22 hm5C_associated_SNPs_105127 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128509451-128509474
64251 chr11 76835517 76835517 1 + C G rs185212384 76835516 + 76835496 76835536 41 TAAACGACACCTTTGAGGCCCCAGGTGAAGCGGGGCCCTAC TAAACGACACCTTTGAGGCCCGAGGTGAAGCGGGGCCCTAC < 41bp 0.46480915887772 0.769111769776689 0.9068699 0.91636217 prediction 0.538223539553379 Functional Gain - CAPN5 ENSG00000149260 UTR3 Human protein_coding chr11:76835516 chr11:76835517 . . 0 22 hm5C_associated_SNPs_105130 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:76835501-76835525
64251 chr21 42694953 42694953 1 + C A rs149569625 42694949 + 42694929 42694969 41 AGATGCACCCCTGTCCAGTGCTGCCTATAGCATCCGCAGCA AGATGCACCCCTGTCCAGTGCTGCATATAGCATCCGCAGCA < 41bp 0.361099551924526 0.769100839092676 0.11980766 0.08392027 prediction 0.538201678185352 Functional Gain - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42694949 chr21:42694953 synonymous SNV . 0 25 hm5C_associated_SNPs_105131 0 0 3 DDX3X POSTAR2 ENCODE chr21:42694920-42694994
64251 chr5 176307464 176307464 1 + C G rs115453693 176307463 + 176307443 176307483 41 ATCTCACACACACCCCCCTCCCGGGTCACGCAGACACCCCC ATCTCACACACACCCCCCTCCGGGGTCACGCAGACACCCCC < 41bp 0.542691738017675 0.811735880381055 0.86084795 0.9535996 prediction 0.53808828472676 Functional Gain - UNC5A ENSG00000113763 UTR3 Human protein_coding chr5:176307463 chr5:176307464 . . 0 22 hm5C_associated_SNPs_105137 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:176307449-176307475
64251 chr17 78075384 78075384 1 + C G rs144639114 78075383 + 78075363 78075403 41 CTGCGCGCCCCCGGGCACGACCCCGGAGTCTCCGCGGGCGG CTGCGCGCCCCCGGGCACGACGCCGGAGTCTCCGCGGGCGG < 41bp 0.531820175243245 0.800859090541922 0.46434447 0.52669376 prediction 0.538077830597355 Functional Gain - GAA ENSG00000171298 UTR5 Human protein_coding chr17:78075383 chr17:78075384 . . 0 22 hm5C_associated_SNPs_105138 2 0 2 DDX3X POSTAR2 ENCODE chr17:78075381-78075421
64251 chr18 12431342 12431342 1 + C A rs12605427 12431338 + 12431318 12431358 41 GCAACAGGGAGCAGCCCCAGCCAGCCCCACCGCCGCCGTCT GCAACAGGGAGCAGCCCCAGCCAGACCCACCGCCGCCGTCT < 41bp 0.623866827895932 0.892898153407533 0.54132634 0.8157347 prediction 0.538062651023202 Functional Gain - PRELID3A ENSG00000141391 UTR3 Human protein_coding chr18:12431338 chr18:12431342 . . 0 25 hm5C_associated_SNPs_105140 0 0 5 GRWD1 POSTAR2 ENCODE chr18:12431288-12431358
64251 chr10 70661146 70661146 1 + T G UCEC 70661144 + 70661124 70661164 41 GGCGGCGGTGGCCAGTAATGCCTGGGAAACTCCTCTGGGGG GGCGGCGGTGGCCAGTAATGCCGGGGAAACTCCTCTGGGGG < 41bp 0.609224816754403 0.878242550447576 0.8563515 0.9373131 prediction 0.538035467386347 Functional Gain - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70661144 chr10:70661146 synonymous SNV . 0 23 hm5C_associated_SNPs_105142 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70661138-70661166
64251 chr10 94109483 94109483 1 + T G KIRC 94109481 + 94109461 94109501 41 AGGCCAATCCTTTAGCAGATCATGTCTCTGCTACTCGAATC AGGCCAATCCTTTAGCAGATCAGGTCTCTGCTACTCGAATC < 41bp 0.430609357426901 0.769000116561175 0.081358254 0.25702757 prediction 0.53800023312235 Functional Gain - MARCH5 ENSG00000198060 CDS Human protein_coding chr10:94109481 chr10:94109483 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_105145 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr10:94109449-94109484
64251 chrX 46332193 46332193 1 + C A BLCA 46332189 + 46332169 46332209 41 ATTCATTTTCTTCTAGAAGTCTGGCAAGTTGATGAGCAGAT ATTCATTTTCTTCTAGAAGTCTGGAAAGTTGATGAGCAGAT < 41bp 0.384586059419255 0.768988826795878 0.055107117 0.07869187 prediction 0.537977653591756 Functional Gain - KRBOX4 ENSG00000147121 CDS Human protein_coding chrX:46332189 chrX:46332193 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_105147 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:46332180-46332193
64251 chrX 12817403 12817403 1 + T C LUSC 12817401 + 12817381 12817421 41 TGCGGGGAAATTAACGACAACCTGATGGAACTCCTCATCAT TGCGGGGAAATTAACGACAACCCGATGGAACTCCTCATCAT < 41bp 0.518227446082322 0.787205960156482 0.026609153 0.021639317 prediction 0.537957028148321 Functional Gain - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12817401 chrX:12817403 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_105151 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:12817394-12817413
64251 chr3 49209057 49209057 1 + T A rs34571182 49209053 + 49209033 49209073 41 AGCCCGACTTCAGCCCCAGCCAGATCCCGCGTCAACGGAGG AGCCCGACTTCAGCCCCAGCCAGAACCCGCGTCAACGGAGG < 41bp 0.493474843080566 0.768938459961679 0.28619426 0.26152492 prediction 0.537876919923357 Functional Gain - KLHDC8B ENSG00000185909 UTR5 Human protein_coding chr3:49209053 chr3:49209057 . . 0 25 hm5C_associated_SNPs_105153 0 0 1 DDX3X POSTAR2 ENCODE chr3:49209052-49209120
64251 chr2 228197226 228197226 1 + T A LUSC 228197222 + 228197202 228197242 41 ACCCCTGGCACTGAAAACACCACCTCGTGTACTTACGCTGA ACCCCTGGCACTGAAAACACCACCACGTGTACTTACGCTGA < 41bp 0.441529007294809 0.768898492748136 0.070438385 0.08438897 prediction 0.537796985496271 Functional Gain - MFF ENSG00000168958 CDS Human protein_coding chr2:228197222 chr2:228197226 synonymous SNV . 0 25 hm5C_associated_SNPs_105160 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:228197176-228197227
64251 chr22 24237106 24237106 1 - G T ESCA 24237110 - 24237090 24237130 41 TGTCCGGGCTGATGCGCAGGCGCTCGGCCAGCAGGCCGCAC TGTCCGGGCTGATGCGCAGGCGCTAGGCCAGCAGGCCGCAC < 41bp 0.636459533741679 0.905331407342878 0.21864077 0.28892836 prediction 0.537743747202397 Functional Gain - MIF ENSG00000240972;ENSG00000251357 CDS Human other chr22:24237110 chr22:24237106 stopgain 0.973 1 25 hm5C_associated_SNPs_105163 0 0 1 SLTM POSTAR2 ENCODE chr22:24237099-24237130
64251 chr2 27435287 27435287 1 + C A SARC 27435283 + 27435263 27435303 41 TACGACCCTGGTGCCCTGGGCTGCCGCCCTGCTCCTCGCTC TACGACCCTGGTGCCCTGGGCTGCAGCCCTGCTCCTCGCTC < 41bp 0.392434628672772 0.768849247263793 0.17911807 0.25574026 prediction 0.537698494527586 Functional Gain - ATRAID ENSG00000138085 CDS Human protein_coding chr2:27435283 chr2:27435287 synonymous SNV . 0 25 hm5C_associated_SNPs_105167 0 0 13 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:27435260-27435294
64251 chr15 40751214 40751214 1 + C A UCEC 40751210 + 40751190 40751230 41 TTGGAGGAGGAAGTCGGGACCTGTCTCCAGAGCCAGCACCC TTGGAGGAGGAAGTCGGGACCTGTATCCAGAGCCAGCACCC < 41bp 0.360087341590302 0.768835614247545 0.20819154 0.5398928 prediction 0.53767122849509 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40751210 chr15:40751214 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_105169 0 0 1 RBM15 POSTAR2 ENCODE chr15:40751177-40751231
64251 chr3 53195400 53195400 1 + C A rs550252787 53195396 + 53195376 53195416 41 GCGCGCGCCGGGGAGCGGCGCCCCCGCCGCTGCCGCCGCGA GCGCGCGCCGGGGAGCGGCGCCCCAGCCGCTGCCGCCGCGA < 41bp 0.44781854661659 0.768825248617397 0.47885367 0.4051087 prediction 0.537650497234795 Functional Gain - PRKCD ENSG00000163932 UTR5 Human protein_coding chr3:53195396 chr3:53195400 . . 0 25 hm5C_associated_SNPs_105172 0 0 1 DDX3X POSTAR2 ENCODE chr3:53195348-53195446
64251 chr19 42585387 42585387 1 + C G rs561969622 42585386 + 42585366 42585406 41 ACTGCTGTGGAGGCGCTACCCCTGGTGGAAGCCATTGAGAT ACTGCTGTGGAGGCGCTACCCGTGGTGGAAGCCATTGAGAT < 41bp 0.537571447850885 0.806326315953135 0.08645618 0.45935634 prediction 0.5375097362045 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42585386 chr19:42585387 nonsynonymous SNV 0.935 0 22 hm5C_associated_SNPs_105176 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42585359-42585400
64251 chr17 48562324 48562324 1 + T A rs116530870 48562320 + 48562300 48562340 41 GTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAG GTTGTCGGGTGCCGTCTCTGCTCCATGTGGTTATTGCTCAG < 41bp 0.578266207171515 0.847021052746633 0.41767123 0.94248545 prediction 0.537509691150237 Functional Gain - RSAD1 ENSG00000136444 UTR3 Human protein_coding chr17:48562320 chr17:48562324 . . 0 25 hm5C_associated_SNPs_105177 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:48562300-48562340
64251 chr19 34895654 34895654 1 + C G LUSC 34895653 + 34895633 34895673 41 ATTGCCCGCTGGAAGGCTCCCCGTTTCACCGTCTGCTGCAC ATTGCCCGCTGGAAGGCTCCCGGTTTCACCGTCTGCTGCAC < 41bp 0.463199124739264 0.768746089088652 0.32351926 0.81192327 prediction 0.537492178177305 Functional Gain - PDCD2L ENSG00000126249;ENSG00000266953 CDS Human other chr19:34895653 chr19:34895654 nonsynonymous SNV 0.462 3 22 hm5C_associated_SNPs_105180 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:34895648-34895670
64251 chr3 3887829 3887829 1 + C G STAD 3887828 + 3887808 3887848 41 GGAAGATACACATGTGTTGCCCAGAATGTCCAAGGGGCAGA GGAAGATACACATGTGTTGCCGAGAATGTCCAAGGGGCAGA < 41bp 0.547294180625806 0.816021331716628 0.07840589 0.45326197 prediction 0.537454302181644 Functional Gain - LRRN1 ENSG00000175928 CDS Human protein_coding chr3:3887828 chr3:3887829 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_105183 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr3:3887820-3887840
64251 chr1 2235451 2235451 1 + C A UCEC 2235447 + 2235427 2235467 41 AAGCGGAAGCTGACTGTGGACACCCCAGGAGCCCCAGAGAC AAGCGGAAGCTGACTGTGGACACCACAGGAGCCCCAGAGAC < 41bp 0.349218670431654 0.768718241462379 0.10990247 0.28820166 prediction 0.537436482924758 Functional Gain - SKI ENSG00000157933 CDS Human protein_coding chr1:2235447 chr1:2235451 nonsynonymous SNV 0.008 1 25 hm5C_associated_SNPs_105185 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:2235429-2235524
64251 chr10 73724266 73724266 1 + C G rs4148907 73724265 + 73724245 73724285 41 TTCCAGCGTGCCGACCGGCCCCGCAGCGCCTCCATCCCTCC TTCCAGCGTGCCGACCGGCCCGGCAGCGCCTCCATCCCTCC < 41bp 0.528545879372061 0.797250203140221 0.047200084 0.27689394 prediction 0.53740864753632 Functional Gain - CHST3 ENSG00000122863 UTR5 Human protein_coding chr10:73724265 chr10:73724266 . . 0 22 hm5C_associated_SNPs_105186 4 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:73724266-73724267
64251 chr4 1808592 1808592 1 + C G rs145020302 1808588 + 1808568 1808608 41 GCGGGAGTGCTGGCATGCCGCGCCCTCCCAGAGGCCCACCT GCGGGAGTGCTGGCATGCCGCGCCGTCCCAGAGGCCCACCT < 41bp 0.487793857597876 0.768641041138008 0.029661804 0.05142954 prediction 0.537282082276016 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808588 chr4:1808592 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_105190 1 0 2 EIF3H POSTAR2 ENCODE chr4:1808578-1808615
64251 chr13 88327910 88327910 1 + C G LUAD 88327909 + 88327889 88327929 41 AATCTACCACCTCTTGTTGTCCGGAAACCTTTTGAACCGTC AATCTACCACCTCTTGTTGTCGGGAAACCTTTTGAACCGTC < 41bp 0.462985810597811 0.768559102584841 0.4258082 0.9228051 prediction 0.537118205169683 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88327909 chr13:88327910 synonymous SNV . 0 22 hm5C_associated_SNPs_105199 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr13:88327890-88327931
64251 chr12 105151256 105151256 1 + T A COAD 105151252 + 105151232 105151272 41 TCGAGGAGTTTGTGGCCTATCTCATCGACCCACACACCCAG TCGAGGAGTTTGTGGCCTATCTCAACGACCCACACACCCAG < 41bp 0.437623870159034 0.76854662291615 0.22364345 0.7457822 prediction 0.537093245832301 Functional Gain - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105151252 chr12:105151256 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_105200 0 0 4 RBM47 POSTAR2 GSE58380,GSM1409656 chr12:105151240-105151260
64251 chr17 79203128 79203128 1 - G T STAD 79203132 - 79203112 79203152 41 CTGGGAGCCAGGTCTTCCTGCAGCCTCTGAGTTCAACCCCG CTGGGAGCCAGGTCTTCCTGCAGCATCTGAGTTCAACCCCG < 41bp 0.370937462858548 0.768541402704185 0.2774692 0.30672848 prediction 0.537082805408371 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79203132 chr17:79203128 nonsynonymous SNV 0.988 4 25 hm5C_associated_SNPs_105201 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79203123-79203159
64251 chr16 46964371 46964371 1 + C G rs182479770 46964370 + 46964350 46964390 41 TCTATGCTGTGATTTCCACACCGGGTCCGTGCAGAGGAAAC TCTATGCTGTGATTTCCACACGGGGTCCGTGCAGAGGAAAC < 41bp 0.509929221951767 0.778467379253119 0.12588525 0.88947666 prediction 0.537076314602703 Functional Gain - GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46964370 chr16:46964371 . . 0 22 hm5C_associated_SNPs_105202 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:46964347-46964379
64251 chrX 54956525 54956525 1 + C G LUAD 54956524 + 54956504 54956544 41 CTGCTGACTTCGGTGGTACTCCCAGCAACAGCATTGGCTTT CTGCTGACTTCGGTGGTACTCGCAGCAACAGCATTGGCTTT < 41bp 0.470045578421974 0.768532575239837 0.28477988 0.69056964 prediction 0.537065150479675 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54956524 chrX:54956525 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_105203 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:54956513-54956549
64251 chr19 45561110 45561110 1 + C G rs77436067 45561109 + 45561089 45561129 41 AGAGGAGGAGGAGTCAGCGGCCGAGGAGGAGAGCAACTCGG AGAGGAGGAGGAGTCAGCGGCGGAGGAGGAGAGCAACTCGG < 41bp 0.456945833522108 0.768489858171496 0.84043 0.9038627 prediction 0.536979716342992 Functional Gain - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45561109 chr19:45561110 synonymous SNV . 0 22 hm5C_associated_SNPs_105204 0 0 13 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:45561100-45561120
64251 chr12 121134240 121134240 1 + C A GBM 121134236 + 121134216 121134256 41 CAATAAGAACCGGGTGCAGTCAGGCCCCCGCACACCCAACC CAATAAGAACCGGGTGCAGTCAGGACCCCGCACACCCAACC < 41bp 0.636055149742623 0.904535830502968 0.9020737 0.900848 prediction 0.536961361520689 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121134236 chr12:121134240 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_105207 0 0 9 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:121134208-121134245
64251 chr2 211438123 211438123 1 + C G UCEC 211438119 + 211438099 211438139 41 TGGTGAAGTGGTTTTTAATACTGGCCTGGGAGGGTGAGTAA TGGTGAAGTGGTTTTTAATACTGGGCTGGGAGGGTGAGTAA < 41bp 0.513991118442157 0.782467285304652 0.31089783 0.42662847 prediction 0.53695233372499 Functional Gain - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211438119 chr2:211438123 synonymous SNV . 0 25 hm5C_associated_SNPs_105208 0 0 3 U2AF2 POSTAR2 GSE61603,GSM1509288 chr2:211438120-211438140
64251 chr17 76167915 76167915 1 + C A UCEC 76167911 + 76167891 76167931 41 CCCCACTCCGGACCCCAACACTGCCTACGCCTCCTACCCAG CCCCACTCCGGACCCCAACACTGCATACGCCTCCTACCCAG < 41bp 0.648742283066347 0.91721390491832 0.14096212 0.58590156 prediction 0.536943243703946 Functional Gain - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76167911 chr17:76167915 nonsynonymous SNV 0.416 0 25 hm5C_associated_SNPs_105209 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:76167879-76167931
64251 chr3 14527633 14527633 1 + C G rs529102801 14527632 + 14527612 14527652 41 GTGGTGGGGAGGTGAGTGGACCAAAGGATATAGGCCCCAGG GTGGTGGGGAGGTGAGTGGACGAAAGGATATAGGCCCCAGG < 41bp 0.468494658325034 0.768451693565249 0.2628436 0.32632604 prediction 0.536903387130498 Functional Gain - SLC6A6 ENSG00000131389 UTR3 Human protein_coding chr3:14527632 chr3:14527633 . . 0 22 hm5C_associated_SNPs_105210 0 0 1 LIN28B POSTAR2 ENCODE chr3:14527631-14527676
64251 chr6 26465629 26465629 1 + T A GBM 26465625 + 26465605 26465645 41 TGCAAAAAGAGGAAGAACTTCAAGTAAAAGGTAAAAGAGGC TGCAAAAAGAGGAAGAACTTCAAGAAAAAGGTAAAAGAGGC < 41bp 0.459622139659941 0.768420857124079 0.25570643 0.26484805 prediction 0.536841714248158 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26465625 chr6:26465629 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_105214 0 0 2 ZNF622 POSTAR2 ENCODE chr6:26465585-26465630
64251 chr1 41483484 41483484 1 + C A UCEC 41483480 + 41483460 41483500 41 CACCAGGCCGCTGTCCTCTACTCCCACGAGCAGGCTGCCGC CACCAGGCCGCTGTCCTCTACTCCAACGAGCAGGCTGCCGC < 41bp 0.361573469414089 0.768415622040418 0.21144319 0.9346714 prediction 0.536831244080835 Functional Gain - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483480 chr1:41483484 synonymous SNV . 0 25 hm5C_associated_SNPs_105215 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:41483483-41483484
64251 chr19 41903766 41903766 1 + C A rs34541442 41903762 + 41903742 41903782 41 GCGATCGCTGCAGCGAGGGTCTGGCGGCTAAACCGTGGTTT GCGATCGCTGCAGCGAGGGTCTGGAGGCTAAACCGTGGTTT < 41bp 0.397697455199699 0.768408602710124 0.88226104 0.8864641 prediction 0.536817205420248 Functional Gain - BCKDHA ENSG00000248098 CDS Human protein_coding chr19:41903762 chr19:41903766 synonymous SNV . 0 25 hm5C_associated_SNPs_105216 1 0 5 DDX3X POSTAR2 ENCODE chr19:41903723-41903834
64251 chr20 62612640 62612640 1 + C G rs186249212 62612636 + 62612616 62612656 41 ACCGTTCCTAGGGATGCCCGCGCCCCTCGGCTACGTGCCGG ACCGTTCCTAGGGATGCCCGCGCCGCTCGGCTACGTGCCGG < 41bp 0.512370965756837 0.780776142457837 0.10243875 0.10061234 prediction 0.536810353402001 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62612636 chr20:62612640 synonymous SNV . 0 25 hm5C_associated_SNPs_105217 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:62612620-62612640
64251 chr17 2278872 2278872 1 + C G rs61739394 2278871 + 2278851 2278891 41 ACCTGAGCAGGAAGCAGGACCCGGGACTCCGGGCACCGCCG ACCTGAGCAGGAAGCAGGACCGGGGACTCCGGGCACCGCCG < 41bp 0.560235230860341 0.828629611356783 0.8891102 0.90489054 prediction 0.536788760992883 Functional Gain - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278871 chr17:2278872 synonymous SNV . 0 22 hm5C_associated_SNPs_105218 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:2278850-2278896
64251 chr11 94040418 94040418 1 + T A rs200855633 94040414 + 94040394 94040434 41 GAGTGGTGGGAAGACTGTCGCATGTCTTACACATGCAAATC GAGTGGTGGGAAGACTGTCGCATGACTTACACATGCAAATC < 41bp 0.458601675936016 0.768334533237019 0.21111578 0.83745897 prediction 0.536669066474038 Functional Gain - IZUMO1R ENSG00000183560 CDS Human protein_coding chr11:94040414 chr11:94040418 nonsynonymous SNV 0.001 3 25 hm5C_associated_SNPs_105227 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr11:94040400-94040420
64251 chr2 220379549 220379549 1 + C G rs200285513 220379548 + 220379528 220379568 41 AGCCTCCTCGGGGCTGTTGCCCCTGGAGCAGCCCCCCGAGA AGCCTCCTCGGGGCTGTTGCCGCTGGAGCAGCCCCCCGAGA < 41bp 0.452014626311986 0.768321829249484 0.29429406 0.800622 prediction 0.536643658498969 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379548 chr2:220379549 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_105230 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379542-220379620
64251 chr14 102606387 102606387 1 + C A LUSC 102606383 + 102606363 102606403 41 CCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCCTGT CCCAACCGGGTGCCCTTCAACTCGAAGGGATCCAACCCTGT < 41bp 0.648855118538145 0.917166915677913 0.24641702 0.89489657 prediction 0.536623594279536 Functional Gain - WDR20 ENSG00000140153 CDS Human protein_coding chr14:102606383 chr14:102606387 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_105231 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:102606383-102606441
64251 chr22 49145928 49145928 1 + C A rs131959 49145924 + 49145904 49145944 41 AGTCTGTGGGAGCCCGGCCGCGCCCAGCCCCCGCCGACCGT AGTCTGTGGGAGCCCGGCCGCGCCAAGCCCCCGCCGACCGT < 41bp 0.640649992617558 0.90896073796645 0.0805625 0.21631113 prediction 0.536621490697783 Functional Gain - FAM19A5 ENSG00000219438 UTR3 Human protein_coding chr22:49145924 chr22:49145928 . . 0 25 hm5C_associated_SNPs_105233 0 0 1 DDX3X POSTAR2 ENCODE chr22:49145916-49145992
64251 chrX 51638241 51638241 1 + C G UCEC 51638240 + 51638220 51638260 41 TCCACCTACTAACCAGGCCACCGCAGCTGCTAGTCCCCAGA TCCACCTACTAACCAGGCCACGGCAGCTGCTAGTCCCCAGA < 41bp 0.577921947111336 0.846213974533462 0.31970063 0.31490314 prediction 0.536584054844252 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638240 chrX:51638241 synonymous SNV . 0 22 hm5C_associated_SNPs_105235 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chrX:51638208-51638259
64251 chr15 91485730 91485730 1 + C G rs115978927 91485729 + 91485709 91485749 41 TCCATCCTGGGCGTGGAAAGCCAGGCTGTGTCCCTGGCTGC TCCATCCTGGGCGTGGAAAGCGAGGCTGTGTCCCTGGCTGC < 41bp 0.575962551748222 0.844241779146248 0.8988744 0.929211 prediction 0.536558454796052 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91485729 chr15:91485730 nonsynonymous SNV 0.988 0 22 hm5C_associated_SNPs_105237 0 0 4 BUD13 POSTAR2 ENCODE chr15:91485706-91485748
64251 chr14 23080487 23080487 1 + C A rs112626821 23080483 + 23080463 23080503 41 AGCTCTGTGTGATTCAAGTTCTGGCAGAGCTTGTAAGGCTA AGCTCTGTGTGATTCAAGTTCTGGAAGAGCTTGTAAGGCTA < 41bp 0.627255848622631 0.895528936865134 0.20650774 0.27824795 prediction 0.536546176485007 Functional Gain - ABHD4 ENSG00000100439 UTR3 Human protein_coding chr14:23080483 chr14:23080487 . . 0 25 hm5C_associated_SNPs_105238 0 0 2 UPF1 POSTAR2 ENCODE chr14:23080485-23080566
64251 chr19 36033899 36033899 1 - G T TGCT 36033903 - 36033883 36033923 41 ACCCTTCCACGATCCCAAATCGCTCGTGGATGACTTTGGCG ACCCTTCCACGATCCCAAATCGCTAGTGGATGACTTTGGCG < 41bp 0.351725509054662 0.768266132854329 0.10886425 0.12319079 prediction 0.536532265708657 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36033903 chr19:36033899 stopgain 0.616 1 25 hm5C_associated_SNPs_105239 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36033835-36033907
64251 chr12 123741776 123741776 1 + T A rs1969354 123741772 + 123741752 123741792 41 CACGATTCAAGAATAAAACTCGGCTGGGCACGGTGGACGGT CACGATTCAAGAATAAAACTCGGCAGGGCACGGTGGACGGT < 41bp 0.480704698776626 0.768262838909771 0.62212425 0.7360733 prediction 0.536525677819541 Functional Gain - C12orf65 ENSG00000235423 ncRNA_intronic Human antisense chr12:123741772 chr12:123741776 . . 0 25 hm5C_associated_SNPs_105240 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:123741751-123741784
64251 chr12 69202015 69202015 1 + T G rs3730492 69202012 + 69201992 69202032 41 CTTCTGGGGCCTGTGTGGCCCTGTGTGTCGGAAAGATGGAG CTTCTGGGGCCTGTGTGGCCCTGGGTGTCGGAAAGATGGAG < 41bp 0.530139339582502 0.798400506844613 0.18517593 0.41289282 prediction 0.536522334524222 Functional Gain - MDM2 ENSG00000135679 UTR5 Human protein_coding chr12:69202012 chr12:69202015 . . 0 24 hm5C_associated_SNPs_105241 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:69201960-69202040
64251 chr7 6187447 6187447 1 + T G UCEC 6187445 + 6187425 6187465 41 CAGTCCTCTCCCCGCCCCGTCATCAGTCAGCGGGTTGTCAC CAGTCCTCTCCCCGCCCCGTCAGCAGTCAGCGGGTTGTCAC < 41bp 0.415215111165751 0.768234322140579 0.018135816 0.053934723 prediction 0.536468644281158 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6187445 chr7:6187447 nonsynonymous SNV 0.827 0 23 hm5C_associated_SNPs_105245 0 0 3 METAP2 POSTAR2 ENCODE chr7:6187398-6187511
64251 chr3 57542860 57542860 1 + C A MESO 57542856 + 57542836 57542876 41 CTAAGGCTCAAGCTTCACTGCACCCCAGGCGATGGGCAGCG CTAAGGCTCAAGCTTCACTGCACCACAGGCGATGGGCAGCG < 41bp 0.346866783215377 0.768231112136515 0.02116403 0.015122116 prediction 0.53646222427303 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542856 chr3:57542860 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_105247 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:57542821-57542867
64251 chr19 50905129 50905129 1 + C G BLCA 50905125 + 50905105 50905145 41 GGTCACCGATGAGGGGTTCTCTGTCTGCTGCCACATCCACG GGTCACCGATGAGGGGTTCTCTGTGTGCTGCCACATCCACG < 41bp 0.532347961446868 0.800576574737381 0.18431386 0.3436668 prediction 0.536457226581024 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905125 chr19:50905129 synonymous SNV . 0 25 hm5C_associated_SNPs_105248 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50905106-50905131
64251 chr1 15541674 15541674 1 + T A LIHC 15541670 + 15541650 15541690 41 GTCCTTGGGGTGATCATGGCCATGTGGAACCTGGTACCCGG GTCCTTGGGGTGATCATGGCCATGAGGAACCTGGTACCCGG < 41bp 0.561566737635993 0.829794427816765 0.37334192 0.31620532 prediction 0.536455380361544 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15541670 chr1:15541674 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_105249 0 0 3 DDX3X POSTAR2 ENCODE chr1:15541657-15541727
64251 chr14 102276303 102276303 1 + C G rs200109462 102276299 + 102276279 102276319 41 GATGTTGACATGTAATAAAGCGGGCAGCAGGATGGTGGTGG GATGTTGACATGTAATAAAGCGGGGAGCAGGATGGTGGTGG < 41bp 0.516612523155698 0.784829754311105 0.75735235 0.91786593 prediction 0.536434462310815 Functional Gain - PPP2R5C ENSG00000078304 CDS Human protein_coding chr14:102276299 chr14:102276303 synonymous SNV . 0 25 hm5C_associated_SNPs_105251 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:102276242-102276328
64251 chr11 60692049 60692049 1 + C G rs559735404 60692048 + 60692028 60692068 41 CGGAGCGGGTGCGGGAGATGCCGTGCGGGACTGGGGCCACC CGGAGCGGGTGCGGGAGATGCGGTGCGGGACTGGGGCCACC < 41bp 0.548476731741778 0.816677946596608 0.8633364 0.89625114 prediction 0.536402429709659 Functional Gain - TMEM132A ENSG00000256196 ncRNA_intronic Human antisense chr11:60692048 chr11:60692049 . . 0 22 hm5C_associated_SNPs_105254 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:60692047-60692070
64251 chr22 19119640 19119640 1 - G T rs143115966 19119644 - 19119624 19119664 41 CGGTAGATGAGGTCCTTGCACTCGCAGGTCAGGTTCTTGGA CGGTAGATGAGGTCCTTGCACTCGAAGGTCAGGTTCTTGGA < 41bp 0.636414247529856 0.904585816874238 0.061957836 0.19660094 prediction 0.536343138688765 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119644 chr22:19119640 nonsynonymous SNV 0.613 0 25 hm5C_associated_SNPs_105261 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:19119620-19119640
64251 chr19 42728829 42728829 1 + C G rs201702024 42728825 + 42728805 42728845 41 TCAGAGGAGGAGGCACTGACCACACAGAATGTTGGCCTGGA TCAGAGGAGGAGGCACTGACCACAGAGAATGTTGGCCTGGA < 41bp 0.512758424827171 0.780875885524654 0.13366267 0.3587734 prediction 0.536234921394966 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728825 chr19:42728829 nonsynonymous SNV 0.832 0 25 hm5C_associated_SNPs_105263 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:42728820-42728840
64251 chr17 61895495 61895495 1 + C G LUAD 61895491 + 61895471 61895511 41 TACCGCCATCCAGAAAGCAGCAGCCGTCATACTGATGGCCA TACCGCCATCCAGAAAGCAGCAGCGGTCATACTGATGGCCA < 41bp 0.525173140994636 0.793265633746841 0.22798643 0.3859787 prediction 0.536184985504409 Functional Gain - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61895491 chr17:61895495 nonsynonymous SNV 0.984 3 25 hm5C_associated_SNPs_105265 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:61895484-61895522
64251 chr5 148730709 148730709 1 + T G UCEC 148730707 + 148730687 148730727 41 GACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG GACCCCCATGAGCATGAACTCAGCTGTCATGTGCCAGCTGG < 41bp 0.454997538227284 0.768060596249832 0.28507468 0.69416535 prediction 0.536121192499663 Functional Gain - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148730707 chr5:148730709 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_105270 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:148730633-148730787
64251 chr4 129035873 129035873 1 + T C SKCM 129035871 + 129035851 129035891 41 GGATAGAAGTTAAAAAAAGACATCAGCCAGCCCCAGTGAAA GGATAGAAGTTAAAAAAAGACACCAGCCAGCCCCAGTGAAA < 41bp 0.503669154321041 0.771636090580549 0.0856888 0.085008115 prediction 0.535933872519016 Functional Gain - LARP1B ENSG00000138709 CDS Human protein_coding chr4:129035871 chr4:129035873 synonymous SNV . 0 23 hm5C_associated_SNPs_105277 0 0 3 GRWD1 POSTAR2 ENCODE chr4:129035807-129035904
64251 chr12 57619424 57619424 1 + T C LIHC 57619422 + 57619402 57619442 41 GCCTGGCTCTGTGCCAAGCCCTTCAAAGTCATCTGTATCTT GCCTGGCTCTGTGCCAAGCCCTCCAAAGTCATCTGTATCTT < 41bp 0.489927377172734 0.767942368028649 0.3339954 0.96464884 prediction 0.535884736057299 Functional Gain - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619422 chr12:57619424 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105280 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:57619407-57619429
64251 chr6 28251868 28251868 1 + T C LUSC 28251866 + 28251846 28251886 41 CTGCTGGTGCTGGAGCAGTTCCTGACCATCCTGCCCAAGGA CTGCTGGTGCTGGAGCAGTTCCCGACCATCCTGCCCAAGGA < 41bp 0.491946779378907 0.767929316170195 0.12279108 0.12656596 prediction 0.53585863234039 Functional Gain - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28251866 chr6:28251868 nonsynonymous SNV 0.772 3 23 hm5C_associated_SNPs_105281 0 0 1 GRWD1 POSTAR2 ENCODE chr6:28251780-28251907
64251 chr5 126145907 126145907 1 + C A UCEC 126145903 + 126145883 126145923 41 GACCAGAAGGAAGCATGAAACGCGCTTGGTAGAGGTGGATT GACCAGAAGGAAGCATGAAACGCGATTGGTAGAGGTGGATT < 41bp 0.646562960997634 0.914484291046551 0.406878 0.41572806 prediction 0.535842660097834 Functional Gain - LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126145903 chr5:126145907 synonymous SNV . 0 25 hm5C_associated_SNPs_105282 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:126145877-126145930
64251 chr12 53681945 53681945 1 + C G rs145892138 53681944 + 53681924 53681964 41 CCTGGCCTGAATGGCAGGAGCCGGAGGGCCAAGAAGGTGGC CCTGGCCTGAATGGCAGGAGCGGGAGGGCCAAGAAGGTGGC < 41bp 0.57056381672679 0.838445387145414 0.9103102 0.9071392 prediction 0.535763140837246 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53681944 chr12:53681945 nonsynonymous SNV 0.041 1 22 hm5C_associated_SNPs_105288 0 0 1 PPIG POSTAR2 ENCODE chr12:53681890-53681950
64251 chr3 32208809 32208809 1 + T G rs529696104 32208806 + 32208786 32208826 41 AGCAAGTCCCAAACACATTACACTGAAGAGATTTTGGTGAG AGCAAGTCCCAAACACATTACACGGAAGAGATTTTGGTGAG < 41bp 0.421501777943203 0.767867067844237 0.048281997 0.23264563 prediction 0.535734135688474 Functional Gain - GPD1L ENSG00000152642 UTR3 Human protein_coding chr3:32208806 chr3:32208809 . . 0 24 hm5C_associated_SNPs_105291 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr3:32208775-32208827
64251 chr12 12870508 12870508 1 + C G rs3093728 12870507 + 12870487 12870527 41 GACGGGCTTTGCCACCCTCTCCGCTTGCCTGGTCCCCTCTC GACGGGCTTTGCCACCCTCTCGGCTTGCCTGGTCCCCTCTC < 41bp 0.524383856415686 0.792215582425163 0.40525272 0.92035043 prediction 0.535663452018955 Functional Gain - CDKN1B ENSG00000111276 UTR5 Human protein_coding chr12:12870507 chr12:12870508 . . 0 22 hm5C_associated_SNPs_105294 1 0 16 EIF3D POSTAR2 GSE65004,GSM1585671 chr12:12870497-12870534
64251 chr11 63753920 63753920 1 + T G UCEC 63753917 + 63753897 63753937 41 GGAAGCGGTCGGTAGTGCGGCGCTGTTTAAAGATGGCGGCG GGAAGCGGTCGGTAGTGCGGCGCGGTTTAAAGATGGCGGCG < 41bp 0.488715344263337 0.76780830806185 0.13646701 0.4162285 prediction 0.5356166161237 Functional Gain - OTUB1 ENSG00000167770;ENSG00000256100 CDS Human other chr11:63753917 chr11:63753920 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_105297 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819209 chr11:63753920-63753940
64251 chr6 37141962 37141962 1 + C A rs12197850 37141958 + 37141938 37141978 41 CCCGAGTACCAGTGACACGTCTCGCCAAGCAGGACAGTGCT CCCGAGTACCAGTGACACGTCTCGACAAGCAGGACAGTGCT < 41bp 0.359760542595921 0.76780665899382 0.23695919 0.93450254 prediction 0.535613317987639 Functional Gain - PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37141958 chr6:37141962 . . 0 25 hm5C_associated_SNPs_105298 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:37141941-37141966
64251 chr21 44313401 44313401 1 + C G rs201202115 44313397 + 44313377 44313417 41 CGGCTGTTCAGGCGCGGGTGCGCGCGCAGCTGCTGTGGCCC CGGCTGTTCAGGCGCGGGTGCGCGGGCAGCTGCTGTGGCCC < 41bp 0.521404345631507 0.78919140557681 0.39242637 0.90847623 prediction 0.535574119890608 Functional Gain - NDUFV3 ENSG00000160194 UTR5 Human protein_coding chr21:44313397 chr21:44313401 . . 0 25 hm5C_associated_SNPs_105299 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:44313396-44313420
64251 chr19 49843594 49843594 1 + C G rs201920299 49843590 + 49843570 49843610 41 CGCTCGATACCGTTAGGCCCCGCCCTCCCCAAAGTCCCGCC CGCTCGATACCGTTAGGCCCCGCCGTCCCCAAAGTCCCGCC < 41bp 0.479813532581332 0.767785039706658 0.119140774 0.15265962 prediction 0.535570079413316 Functional Gain - CD37 ENSG00000197813 ncRNA_exonic Human lincRNA chr19:49843590 chr19:49843594 . . 0 25 hm5C_associated_SNPs_105300 0 0 1 IGF2BP2 POSTAR2 ENCODE chr19:49843566-49843647
64251 chr14 29237686 29237686 1 + T A SKCM 29237682 + 29237662 29237702 41 TCGGTGCCCTGCTCTGGGACCTACTCCCTCAACCCCTGCTC TCGGTGCCCTGCTCTGGGACCTACACCCTCAACCCCTGCTC < 41bp 0.44200837696454 0.767774659840999 0.3698063 0.33457637 prediction 0.535549319681999 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237682 chr14:29237686 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_105303 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:29237680-29237700
64251 chr5 173317642 173317642 1 + C G SKCM 173317638 + 173317618 173317658 41 ACCCTCCTCTTCCTGGAGCCCGGGCGGTGGTGGATATGGTG ACCCTCCTCTTCCTGGAGCCCGGGGGGTGGTGGATATGGTG < 41bp 0.50407531213593 0.771808037063908 0.89091337 0.9113517 prediction 0.535465449855957 Functional Gain - CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173317638 chr5:173317642 synonymous SNV . 0 25 hm5C_associated_SNPs_105309 0 0 1 RBM15 POSTAR2 ENCODE chr5:173317622-173317688
64251 chr8 122652154 122652154 1 + C G rs111529237 122652150 + 122652130 122652170 41 CGCCCCGTTCATCGGCTGGGCGCTCGAGACGGCGCCCCCAG CGCCCCGTTCATCGGCTGGGCGCTGGAGACGGCGCCCCCAG < 41bp 0.500699627774081 0.76841255546072 0.25779352 0.46022618 prediction 0.535425855373277 Functional Gain - HAS2-AS1 ENSG00000248690 ncRNA_exonic Human antisense chr8:122652150 chr8:122652154 . . 0 25 hm5C_associated_SNPs_105313 0 0 1 WTAP POSTAR2 GSE46705,GSM1135010 chr8:122652140-122652160
64251 chrX 101971973 101971973 1 + T A UCEC 101971969 + 101971949 101971989 41 AACTATATGTCCGGGTTTCTCTCCTTATTAACCACAGCCAA AACTATATGTCCGGGTTTCTCTCCATATTAACCACAGCCAA < 41bp 0.597101001651112 0.864806300142626 0.12125087 0.9632767 prediction 0.535410596983028 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971969 chrX:101971973 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_105314 0 0 1 EWSR1 POSTAR2 SRX029343 chrX:101971963-101971985
64251 chr10 104215165 104215165 1 + C G rs143449005 104215164 + 104215144 104215184 41 TGATCCTCCTACCTCAGCTTCCTGAGTAGCTAGGACCACAG TGATCCTCCTACCTCAGCTTCGTGAGTAGCTAGGACCACAG < 41bp 0.555765411272853 0.823433910206885 0.15189981 0.4186526 prediction 0.535336997868063 Functional Gain - RPARP-AS1 ENSG00000269609 ncRNA_exonic Human processed_transcript chr10:104215164 chr10:104215165 . . 0 22 hm5C_associated_SNPs_105318 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:104215130-104215180
64251 chr12 113724851 113724851 1 + T C UCEC 113724849 + 113724829 113724869 41 CTGCTGGCGCTGGCCCTCAACATGGAGCCCTTCTATTTCAT CTGCTGGCGCTGGCCCTCAACACGGAGCCCTTCTATTTCAT < 41bp 0.511243679836726 0.778891334014171 0.053029746 0.11365911 prediction 0.535295308354891 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113724849 chr12:113724851 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_105321 0 0 2 BUD13 POSTAR2 ENCODE chr12:113724830-113724877
64251 chr9 101894898 101894898 1 + C G SARC 101894897 + 101894877 101894917 41 ATGGTCTATATCTGCCACAACCGCACTGTCATTCACCATCG ATGGTCTATATCTGCCACAACGGCACTGTCATTCACCATCG < 41bp 0.466114055216166 0.767576063021581 0.30604064 0.20722935 prediction 0.535152126043162 Functional Gain - TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101894897 chr9:101894898 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_105329 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:101894876-101894928
64251 chr20 37632409 37632409 1 + T A KIRC 37632405 + 37632385 37632425 41 TCTTTAGGAAGAGGTAGAAACTGTTGTGTCGATGCTCATCG TCTTTAGGAAGAGGTAGAAACTGTAGTGTCGATGCTCATCG < 41bp 0.444552710690975 0.767575788768846 0.27997622 0.38518175 prediction 0.535151577537693 Functional Gain - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37632405 chr20:37632409 synonymous SNV . 0 25 hm5C_associated_SNPs_105330 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr20:37632392-37632412
64251 chrX 150844668 150844668 1 + T A rs189018655 150844664 + 150844644 150844684 41 AAATGGGGGGAGGGGGCAGGCCAATGAGGTCTGCATGGCCA AAATGGGGGGAGGGGGCAGGCCAAAGAGGTCTGCATGGCCA < 41bp 0.4829274191954 0.767553078612782 0.7789935 0.77313495 prediction 0.535106157225564 Functional Gain - PASD1 ENSG00000166049 UTR3 Human protein_coding chrX:150844664 chrX:150844668 . . 0 25 hm5C_associated_SNPs_105335 0 0 1 DDX6 POSTAR2 ENCODE chrX:150844650-150844797
64251 chr3 120321252 120321252 1 + C A rs145250470 120321248 + 120321228 120321268 41 ACACCCTAACAACACAGAAGCAGACGCAGCCCGTGTTGGGA ACACCCTAACAACACAGAAGCAGAAGCAGCCCGTGTTGGGA < 41bp 0.543655249561639 0.811197671541518 0.4014572 0.6730304 prediction 0.535084843959759 Functional Gain - NDUFB4 ENSG00000065518 UTR3 Human protein_coding chr3:120321248 chr3:120321252 . . 0 25 hm5C_associated_SNPs_105337 0 0 1 CSTF2 POSTAR2 ENCODE chr3:120321186-120321278
64251 chr12 65088729 65088729 1 + C G rs147473484 65088728 + 65088708 65088748 41 CCGTGAGGCCCGGTGCAGGACCGATGTACAAAACAGCAGCA CCGTGAGGCCCGGTGCAGGACGGATGTACAAAACAGCAGCA < 41bp 0.558644315050931 0.826185974627091 0.7251214 0.55876714 prediction 0.535083319152318 Functional Gain - RASSF3 ENSG00000153179 UTR3 Human protein_coding chr12:65088728 chr12:65088729 . . 0 22 hm5C_associated_SNPs_105338 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:65088718-65088754
64251 chr2 231742826 231742826 1 + C G rs373905541 231742822 + 231742802 231742842 41 CGGGGTGGTGTGAGGCCCTCCTCCCCCAGAACCCCCTGCCG CGGGGTGGTGTGAGGCCCTCCTCCGCCAGAACCCCCTGCCG < 41bp 0.472559678324709 0.767526180408815 0.074484795 0.11301154 prediction 0.535052360817631 Functional Gain - ITM2C ENSG00000135916 UTR3 Human protein_coding chr2:231742822 chr2:231742826 . . 0 25 hm5C_associated_SNPs_105339 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:231742811-231742873
64251 chr20 18296539 18296539 1 + C A UCEC 18296535 + 18296515 18296555 41 TGTCGTGAGACACCAGAGGACACACTTGGAGGAGAAGACCA TGTCGTGAGACACCAGAGGACACAATTGGAGGAGAAGACCA < 41bp 0.356171047458696 0.76746312677475 0.031828016 0.04423967 prediction 0.5349262535495 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296535 chr20:18296539 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_105351 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:18296539-18296540
64251 chr5 175798882 175798882 1 + T G OV 175798880 + 175798860 175798900 41 GTGCACATCTGGAAACTGCTCTTGGAGCTCCTCTCCTAGGC GTGCACATCTGGAAACTGCTCTGGGAGCTCCTCTCCTAGGC < 41bp 0.59963510239784 0.867089520323863 0.1898042 0.6872363 prediction 0.534908835852047 Functional Gain - ARL10 ENSG00000175414 CDS Human protein_coding chr5:175798880 chr5:175798882 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_105352 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:175798880-175798900
64251 chr6 111196387 111196387 1 + C G rs199935766 111196386 + 111196366 111196406 41 CGGCAGCAGCCCGACGCAAACCAAGGATCTGGGGATCTTCG CGGCAGCAGCCCGACGCAAACGAAGGATCTGGGGATCTTCG < 41bp 0.550515908391838 0.817939204600873 0.09668383 0.4054622 prediction 0.534846592418071 Functional Gain - AMD1 ENSG00000123505 CDS Human protein_coding chr6:111196386 chr6:111196387 nonsynonymous SNV 0.735 0 22 hm5C_associated_SNPs_105355 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:111196341-111196390
64251 chr3 150877801 150877801 1 + C A SKCM 150877797 + 150877777 150877817 41 CAGCCCTGGCCCCCCCGGCCCTGGCATGAGCCCCGTGCAGC CAGCCCTGGCCCCCCCGGCCCTGGAATGAGCCCCGTGCAGC < 41bp 0.377891024496992 0.767391021742067 0.58805394 0.8892697 prediction 0.534782043484135 Functional Gain - MED12L ENSG00000144893 CDS Human protein_coding chr3:150877797 chr3:150877801 synonymous SNV . 0 25 hm5C_associated_SNPs_105359 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:150877782-150877820
64251 chr20 34526642 34526642 1 + C A SARC 34526638 + 34526618 34526658 41 GAAGCCGGGAGCATCCTGATCTGCCGCTGTGGTGCCAGCCT GAAGCCGGGAGCATCCTGATCTGCAGCTGTGGTGCCAGCCT < 41bp 0.343297681016041 0.767373399439585 0.14591819 0.54772955 prediction 0.534746798879171 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34526638 chr20:34526642 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_105363 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr20:34526635-34526661
64251 chr17 29325811 29325811 1 + C G BLCA 29325810 + 29325790 29325830 41 TGTGAGAGGTTTTCTACCAGCCAGGTCTTATGTTCCCAGGC TGTGAGAGGTTTTCTACCAGCGAGGTCTTATGTTCCCAGGC < 41bp 0.56867231048679 0.836042145667048 0.22990066 0.6849325 prediction 0.534739670360516 Functional Gain - RNF135 ENSG00000181481 CDS Human protein_coding chr17:29325810 chr17:29325811 nonsynonymous SNV 0.939 4 22 hm5C_associated_SNPs_105366 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:29325800-29325820
64251 chrX 15721240 15721240 1 + C G rs745992808 15721239 + 15721219 15721259 41 CAACATCAGGCCTGATTTCTCCAAGGCTCCCCTGGCCTACG CAACATCAGGCCTGATTTCTCGAAGGCTCCCCTGGCCTACG < 41bp 0.568198941673461 0.83555425647334 0.91255873 0.94095063 prediction 0.53471062959976 Functional Gain - CA5BP1 ENSG00000186312 ncRNA_exonic Human transcribed_unprocessed_pseudogene chrX:15721239 chrX:15721240 . . 0 22 hm5C_associated_SNPs_105371 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:15721232-15721259
64251 chr4 124319665 124319665 1 + C G rs571675258 124319661 + 124319641 124319681 41 TTGGCCCCCGGCCACCGCTTCGGCCTAGGTGAGTGTGTGCG TTGGCCCCCGGCCACCGCTTCGGCGTAGGTGAGTGTGTGCG < 41bp 0.53105470185426 0.798378843552037 0.45899484 0.8389437 prediction 0.534648283395554 Functional Gain - SPRY1 ENSG00000164056 UTR5 Human protein_coding chr4:124319661 chr4:124319665 . . 0 25 hm5C_associated_SNPs_105376 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr4:124319634-124319668
64251 chr15 96875647 96875647 1 + C G PRAD 96875643 + 96875623 96875663 41 GAGGGCTGCAAGAGCTTCTTCAAGCGCAGCGTGCGGAGGAA GAGGGCTGCAAGAGCTTCTTCAAGGGCAGCGTGCGGAGGAA < 41bp 0.500971787915077 0.768285426776538 0.33465457 0.4548043 prediction 0.534627277722922 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96875643 chr15:96875647 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_105380 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:96875640-96875660
64251 chr1 41483537 41483537 1 + C A rs150541088 41483533 + 41483513 41483553 41 GGAAGGCGCACACGTAGCGCCGCACGTGGTGCTTGAAGGCC GGAAGGCGCACACGTAGCGCCGCAAGTGGTGCTTGAAGGCC < 41bp 0.374341081102986 0.767313448728291 0.088701636 0.13354674 prediction 0.534626897456581 Functional Gain - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41483533 chr1:41483537 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_105381 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:41483520-41483540
64251 chr1 229795041 229795041 1 + C G LUSC 229795037 + 229795017 229795057 41 TGAAGGAGAGAAAAGATATACGGCCTAAGGCTATGGGACAG TGAAGGAGAGAAAAGATATACGGCGTAAGGCTATGGGACAG < 41bp 0.504756283063482 0.772066404620011 0.07102269 0.22419599 prediction 0.534620243113059 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229795037 chr1:229795041 synonymous SNV . 0 25 hm5C_associated_SNPs_105383 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:229795017-229795041
64251 chr17 42786723 42786723 1 + C G LAML 42786719 + 42786699 42786739 41 CCATGGCTGAGAGTAGGCTCCGGGCCCCGGACCTAGGTGGG CCATGGCTGAGAGTAGGCTCCGGGGCCCGGACCTAGGTGGG < 41bp 0.536287483522316 0.803577999821672 0.8682625 0.8981986 prediction 0.534581032598712 Functional Gain - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42786719 chr17:42786723 nonsynonymous SNV 0.906 1 25 hm5C_associated_SNPs_105387 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:42786665-42786743
64251 chr3 32859875 32859875 1 + C G rs554206017 32859874 + 32859854 32859894 41 CGACCAGAAAGTAGTGCTAGCCGAGGCGGCGGGTATGGACG CGACCAGAAAGTAGTGCTAGCGGAGGCGGCGGGTATGGACG < 41bp 0.470844737471634 0.767275165078897 0.7565239 0.9125534 prediction 0.534550330157793 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32859874 chr3:32859875 synonymous SNV . 0 22 hm5C_associated_SNPs_105389 0 0 1 DDX3X POSTAR2 ENCODE chr3:32859865-32859897
64251 chr7 116557939 116557939 1 + C G rs3173936 116557938 + 116557918 116557958 41 ATAAGATGAACATTGCATGACCGGATCATTTTAGTGTCTTT ATAAGATGAACATTGCATGACGGGATCATTTTAGTGTCTTT < 41bp 0.527952861792126 0.795205679782195 0.037799478 0.21820754 prediction 0.534505635980139 Functional Gain - CAPZA2 ENSG00000198898 UTR3 Human protein_coding chr7:116557938 chr7:116557939 . . 0 22 hm5C_associated_SNPs_105390 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:116557902-116557953
64251 chr19 49132655 49132655 1 + C G rs151205532 49132651 + 49132631 49132671 41 GCTGGGCACCCCGCTGCCCCCAGACTGGGTGACGCTGGAGG GCTGGGCACCCCGCTGCCCCCAGAGTGGGTGACGCTGGAGG < 41bp 0.519976462451186 0.787208434752176 0.52121174 0.85737824 prediction 0.534463944601978 Functional Gain - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132651 chr19:49132655 nonsynonymous SNV 0.852 0 25 hm5C_associated_SNPs_105395 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:49132650-49132688
64251 chr19 54378144 54378144 1 + C G rs532899262 54378140 + 54378120 54378160 41 CCTGGGTTCAAGCGATTCTCCTGCCCCAGCCTCCCAAGTAG CCTGGGTTCAAGCGATTCTCCTGCGCCAGCCTCCCAAGTAG < 41bp 0.549275213805146 0.816493575410545 0.085018516 0.12687457 prediction 0.534436723210798 Functional Gain - MYADM ENSG00000232220 ncRNA_intronic Human antisense chr19:54378140 chr19:54378144 . . 0 25 hm5C_associated_SNPs_105397 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54378133-54378185
64251 chr12 69140221 69140221 1 + C G rs61743809 69140217 + 69140197 69140237 41 ATCGCCGCCGGGCTCCTGTTCAACCTGCTGGTGTCCATCTG ATCGCCGCCGGGCTCCTGTTCAACGTGCTGGTGTCCATCTG < 41bp 0.488882767318442 0.767214996734074 0.21484885 0.4100262 prediction 0.534429993468148 Functional Gain - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69140217 chr12:69140221 nonsynonymous SNV 0.930 0 25 hm5C_associated_SNPs_105398 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:69140220-69140240
64251 chr20 44571836 44571836 1 + C A OV 44571832 + 44571812 44571852 41 GTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGT GTTGCCCAGCAACTGTGAACCAGTAGTGTCACCTTCCATGT < 41bp 0.355829498158391 0.76720122908953 0.15749973 0.15561005 prediction 0.53440245817906 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44571832 chr20:44571836 synonymous SNV . 0 25 hm5C_associated_SNPs_105399 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:44571828-44571851
64251 chr22 42043068 42043068 1 + C G UCEC 42043064 + 42043044 42043084 41 TACAGGCGGTTTGCTTCTGCCTAGCGATACCAAGAGGTCTC TACAGGCGGTTTGCTTCTGCCTAGGGATACCAAGAGGTCTC < 41bp 0.504778209310859 0.771949831199214 0.0052987635 0.030353963 prediction 0.534343243776708 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42043064 chr22:42043068 nonsynonymous SNV 0.728 4 25 hm5C_associated_SNPs_105403 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chr22:42043023-42043078
64251 chrX 15794942 15794942 1 + T A SKCM 15794938 + 15794918 15794958 41 CTGACTACCCCACCCCTCTCCGAGTCTGTCACCTGGATCAT CTGACTACCCCACCCCTCTCCGAGACTGTCACCTGGATCAT < 41bp 0.441753025415345 0.767167511411169 0.85779345 0.86573803 prediction 0.534335022822339 Functional Gain - CA5B ENSG00000169239 CDS Human protein_coding chrX:15794938 chrX:15794942 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_105406 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:15794906-15794956
64251 chr16 14755875 14755875 1 + C A LUSC 14755871 + 14755851 14755891 41 CTACCTTTCATCCACACCATCTGCCCTCTGCAAGAAGACAG CTACCTTTCATCCACACCATCTGCACTCTGCAAGAAGACAG < 41bp 0.33652236979827 0.767158600380114 0.09487286 0.110673875 prediction 0.534317200760229 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755871 chr16:14755875 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_105407 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr16:14755857-14755881
64251 chr10 13687075 13687075 1 - G T rs567837967 13687079 - 13687059 13687099 41 GAGTCGAGCTGGGGCACACACACACCTGGCCGGGACCCGGC GAGTCGAGCTGGGGCACACACACAACTGGCCGGGACCCGGC < 41bp 0.478245727093415 0.767140119413064 0.13504657 0.19158942 prediction 0.534280238826128 Functional Gain - FRMD4A ENSG00000151474 UTR3 Human protein_coding chr10:13687079 chr10:13687075 . . 0 25 hm5C_associated_SNPs_105410 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr10:13687060-13687080
64251 chr10 105138066 105138066 1 + T C COAD 105138064 + 105138044 105138084 41 AGTCTTACCAAAAAGGAACACATGAAAGGGAATGAGACCAT AGTCTTACCAAAAAGGAACACACGAAAGGGAATGAGACCAT < 41bp 0.485344644142288 0.767135789908687 0.24928737 0.12766105 prediction 0.534271579817375 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105138064 chr10:105138066 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105412 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:105138055-105138091
64251 chr4 7774504 7774504 1 + C G rs60282676 7774500 + 7774480 7774520 41 TGGGTGCACTGGCCCTCGGCCACGCAAGGCCGCGCCAGCCT TGGGTGCACTGGCCCTCGGCCACGGAAGGCCGCGCCAGCCT < 41bp 0.535123991034434 0.802227954774717 0.45491594 0.72907615 prediction 0.534207927480565 Functional Gain - AFAP1-AS1 ENSG00000272620 ncRNA_exonic Human antisense chr4:7774500 chr4:7774504 . . 0 25 hm5C_associated_SNPs_105414 0 0 3 UPF1 POSTAR2 ENCODE chr4:7774494-7774515
64251 chr1 205240255 205240255 1 + C A HNSC 205240251 + 205240231 205240271 41 CTCTCTCCCTCCGCCAGGTACGAGCGGCTGGAGGAGCAGCT CTCTCTCCCTCCGCCAGGTACGAGAGGCTGGAGGAGCAGCT < 41bp 0.366139341345271 0.767099971278053 0.8903644 0.91354 prediction 0.534199942556105 Functional Gain - TMCC2 ENSG00000133069 CDS Human protein_coding chr1:205240251 chr1:205240255 synonymous SNV . 0 25 hm5C_associated_SNPs_105415 0 0 1 AARS POSTAR2 ENCODE chr1:205240250-205240261
64251 chr7 2701789 2701789 1 + C G rs115868877 2701788 + 2701768 2701808 41 GTTCACAGGCACGGCTGGGGCCGCTCTGTGCTGGCGCCTGC GTTCACAGGCACGGCTGGGGCGGCTCTGTGCTGGCGCCTGC < 41bp 0.55767163950632 0.824738892858827 0.2897415 0.47518545 prediction 0.534134506705014 Functional Gain - TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2701788 chr7:2701789 . . 0 22 hm5C_associated_SNPs_105419 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:2701702-2701850
64251 chr10 77167892 77167892 1 + C G rs570070537 77167891 + 77167871 77167911 41 GCGGCGCGCTCGGCCCCGGCCCTGAGAGGCTGCGCGGGTGG GCGGCGCGCTCGGCCCCGGCCGTGAGAGGCTGCGCGGGTGG < 41bp 0.546755049864675 0.813819657400579 0.078160495 0.32161945 prediction 0.534129215071808 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167891 chr10:77167892 . . 0 22 hm5C_associated_SNPs_105422 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:77167862-77167894
64251 chr2 26410254 26410254 1 + C G rs531671860 26410253 + 26410233 26410273 41 ACACAGCCCAGCCAGGCCTCCCGGGCCCTCACAGAGCCTCT ACACAGCCCAGCCAGGCCTCCGGGGCCCTCACAGAGCCTCT < 41bp 0.456306291918119 0.767018749042712 0.16574615 0.7465956 prediction 0.534037498085423 Functional Gain - GAREM2 ENSG00000157833 CDS Human protein_coding chr2:26410253 chr2:26410254 nonsynonymous SNV 0.054 0 22 hm5C_associated_SNPs_105427 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:26410203-26410341
64251 chr16 29853106 29853106 1 + C A LUSC 29853102 + 29853082 29853122 41 AACAAGACCCGTGTGGTCAGCTACCGCGTGCCCCACAACGC AACAAGACCCGTGTGGTCAGCTACAGCGTGCCCCACAACGC < 41bp 0.338079099885459 0.767017668177977 0.086977005 0.20888373 prediction 0.534035336355953 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29853102 chr16:29853106 nonsynonymous SNV 0.837 3 25 hm5C_associated_SNPs_105428 0 0 1 SUPV3L1 POSTAR2 ENCODE chr16:29853067-29853122
64251 chr6 30619145 30619145 1 + T G rs35201959 30619143 + 30619123 30619163 41 TTTTACAGCTGACCCGCCACCCTGAGAACTGGACCCTGCAA TTTTACAGCTGACCCGCCACCCGGAGAACTGGACCCTGCAA < 41bp 0.524498895610464 0.791508389284591 0.18472657 0.93299717 prediction 0.534018987348254 Functional Gain - C6orf136 ENSG00000204564 CDS Human protein_coding chr6:30619143 chr6:30619145 stoploss . 0 23 hm5C_associated_SNPs_105430 0 0 5 GRWD1 POSTAR2 ENCODE chr6:30619108-30619178
64251 chr22 23466057 23466057 1 + C G rs147038488 23466056 + 23466036 23466076 41 GAGGAGGGCCAGCTCGCTGCCCGAGCTCTGGCCTAGGGACC GAGGAGGGCCAGCTCGCTGCCGGAGCTCTGGCCTAGGGACC < 41bp 0.468329958144719 0.76700592785128 0.79775393 0.9082767 prediction 0.534011855702559 Functional Gain - GNAZ ENSG00000128266 UTR3 Human protein_coding chr22:23466056 chr22:23466057 . . 0 22 hm5C_associated_SNPs_105432 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:23466054-23466088
64251 chr19 18977553 18977553 1 + C A rs567906682 18977549 + 18977529 18977569 41 GGGAGCGGAGGAGGGGCCGGCCCGCGGGAGCCGCGGCCACC GGGAGCGGAGGAGGGGCCGGCCCGAGGGAGCCGCGGCCACC < 41bp 0.627843668791234 0.894793070800817 0.7521968 0.8706393 prediction 0.533898804019166 Functional Gain - UPF1 ENSG00000005007 UTR3 Human protein_coding chr19:18977549 chr19:18977553 . . 0 25 hm5C_associated_SNPs_105434 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:18977552-18977553
64251 chr9 131909727 131909727 1 + C A KIRC 131909723 + 131909703 131909743 41 TCGGGAGCCTGCTGCCCATCCATCCTGTCACGTCGGGCTAG TCGGGAGCCTGCTGCCCATCCATCATGTCACGTCGGGCTAG < 41bp 0.389529515549496 0.766907412525927 0.15820125 0.10442713 prediction 0.533814825051855 Functional Gain - PTPA ENSG00000119383 CDS Human protein_coding chr9:131909723 chr9:131909727 nonsynonymous SNV 0.862 4 25 hm5C_associated_SNPs_105442 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:131909699-131909757
64251 chr12 7310150 7310150 1 + C A UCEC 7310146 + 7310126 7310166 41 GGCTTCCTGGTGCTCATGGTCGTCCTGGGCCTGGTGCGCAT GGCTTCCTGGTGCTCATGGTCGTCATGGGCCTGGTGCGCAT < 41bp 0.347387556755805 0.766894798356014 0.15205318 0.27618372 prediction 0.533789596712028 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7310146 chr12:7310150 nonsynonymous SNV 0.986 3 25 hm5C_associated_SNPs_105443 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7310121-7310163
64251 chr1 24782721 24782721 1 + T C STAD 24782719 + 24782699 24782739 41 CTTGACTACCCCATCTTCTACGTGATGTTCGTGTGCATGGT CTTGACTACCCCATCTTCTACGCGATGTTCGTGTGCATGGT < 41bp 0.53759666633059 0.804463362934494 0.13841894 0.157163 prediction 0.533733393207809 Functional Gain - NIPAL3 ENSG00000001461 CDS Human protein_coding chr1:24782719 chr1:24782721 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105447 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:24782699-24782725
64251 chr6 27222804 27222804 1 + C A SARC 27222800 + 27222780 27222820 41 GGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAA GGCATGTGCTAAGTGTAACACAGGATTTAGGATCCTCAGAA < 41bp 0.646523772628659 0.913372932235232 0.28511333 0.46505916 prediction 0.533698319213147 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27222800 chr6:27222804 nonsynonymous SNV 0.053 0 25 hm5C_associated_SNPs_105448 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:27222795-27222807
64251 chr17 38508212 38508212 1 + T A LUSC 38508208 + 38508188 38508228 41 AAGAAGGAGGTGCCCAAGCCCGAGTGCTCTGAGAGCTACAC AAGAAGGAGGTGCCCAAGCCCGAGAGCTCTGAGAGCTACAC < 41bp 0.575298510904999 0.84213697494443 0.62908727 0.85244805 prediction 0.533676928078863 Functional Gain - RARA ENSG00000131759 CDS Human protein_coding chr17:38508208 chr17:38508212 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_105449 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:38508187-38508214
64251 chr3 52521224 52521224 1 + C G BRCA 52521223 + 52521203 52521243 41 CCTGCACAGCCCAGAACATGCCGAGCCGGAGGTCCAGGTGG CCTGCACAGCCCAGAACATGCGGAGCCGGAGGTCCAGGTGG < 41bp 0.459035765455617 0.766829100039243 0.85134935 0.9277263 prediction 0.533658200078487 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52521223 chr3:52521224 synonymous SNV . 0 22 hm5C_associated_SNPs_105450 0 0 2 PPIG POSTAR2 ENCODE chr3:52521214-52521263
64251 chr4 129783067 129783067 1 + T A CESC 129783063 + 129783043 129783083 41 CTGAGTGTTCCCCCCGGAATCCGCTGGAGCCCTTTGCCAGC CTGAGTGTTCCCCCCGGAATCCGCAGGAGCCCTTTGCCAGC < 41bp 0.449861873166155 0.766788924180813 0.18925023 0.6372918 prediction 0.533577848361625 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129783063 chr4:129783067 nonsynonymous SNV 0.342 0 25 hm5C_associated_SNPs_105457 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:129783049-129783078
64251 chr5 154179464 154179464 1 + C T STAD 154179463 + 154179443 154179483 41 TGGCTCTCCTCGTGCAGTCACCCCAGTGCCAACCAAAACAG TGGCTCTCCTCGTGCAGTCACTCCAGTGCCAACCAAAACAG < 41bp 0.491333480536688 0.766746063316687 0.07142165 0.9333576 prediction 0.533492126633374 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179463 chr5:154179464 synonymous SNV . 0 22 hm5C_associated_SNPs_105459 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr5:154179432-154179466
64251 chr1 1431178 1431178 1 + C G rs148302536 1431177 + 1431157 1431197 41 GCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTGTAG GCGGTCGGCCGTTCTGCCCCCGAGGGCACCCCCTGTTGTAG < 41bp 0.467606366409202 0.766744594539766 0.20735833 0.80275 prediction 0.533489189079531 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1431177 chr1:1431178 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_105460 0 0 3 GEMIN5 POSTAR2 ENCODE chr1:1431131-1431185
64251 chr2 190532129 190532129 1 + T A rs149609177 190532125 + 190532105 190532145 41 TACAAGCTGTTAGCCCTTCCCGAATTTGGAATTTTGTTGAA TACAAGCTGTTAGCCCTTCCCGAAATTGGAATTTTGTTGAA < 41bp 0.580805279777943 0.847518511318462 0.35665584 0.52756643 prediction 0.533426463081037 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190532125 chr2:190532129 nonsynonymous SNV 0.971 0 25 hm5C_associated_SNPs_105463 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:190532055-190532134
64251 chrX 84502615 84502615 1 + C G LUSC 84502611 + 84502591 84502631 41 GGTGGAAGTCTTGGATTGCACACGCCAGACTCTAGAATGGC GGTGGAAGTCTTGGATTGCACACGGCAGACTCTAGAATGGC < 41bp 0.499470713463034 0.766702856936546 0.13061267 0.16407192 prediction 0.533405713873093 Functional Gain - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84502611 chrX:84502615 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_105464 0 0 34 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:84502540-84502620
64251 chr17 6939447 6939447 1 + C G rs541605044 6939446 + 6939426 6939466 41 CGGCTTGAACTAGCTCAGCTCCGAGCTCGCGGAACCACGCC CGGCTTGAACTAGCTCAGCTCGGAGCTCGCGGAACCACGCC < 41bp 0.531250445633266 0.79795264872133 0.840996 0.9228641 prediction 0.533404406176127 Functional Gain - SLC16A13 ENSG00000174327 UTR5 Human protein_coding chr17:6939446 chr17:6939447 . . 0 22 hm5C_associated_SNPs_105465 0 0 1 DDX3X POSTAR2 ENCODE chr17:6939438-6939486
64251 chr1 149858887 149858887 1 + C G CESC 149858886 + 149858866 149858906 41 CGTTCTGTTACCAAAGAAAACCGAAAGCCACAAAGCCAAAA CGTTCTGTTACCAAAGAAAACGGAAAGCCACAAAGCCAAAA < 41bp 0.525071517745553 0.79176583156082 0.35461265 0.68325675 prediction 0.533388627630534 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858886 chr1:149858887 synonymous SNV . 0 22 hm5C_associated_SNPs_105468 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:149858820-149858940
64251 chr12 57921371 57921371 1 + C G BLCA 57921367 + 57921347 57921387 41 ACTACTGACCCGGGGGCCTCCTCTCTGGGCAAGGCCCCCTC ACTACTGACCCGGGGGCCTCCTCTGTGGGCAAGGCCCCCTC < 41bp 0.521884037089519 0.78856667205123 0.1751647 0.27874684 prediction 0.533365269923422 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921367 chr12:57921371 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_105470 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57921353-57921376
64251 chr5 154179587 154179587 1 + C T LGG 154179586 + 154179566 154179606 41 GAAGAAGAGGCCTCGGCCATCCCCAGCACGGCCCAAGGTGG GAAGAAGAGGCCTCGGCCATCTCCAGCACGGCCCAAGGTGG < 41bp 0.508833955058177 0.77543745465734 0.24973342 0.9333942 prediction 0.533206999198326 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154179586 chr5:154179587 synonymous SNV . 0 22 hm5C_associated_SNPs_105478 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:154179566-154179591
64251 chr9 72874005 72874005 1 + C G rs573569022 72874004 + 72873984 72874024 41 AGGAAGCCAGGATGGCGACTCCGAGCAAGAAGACGTCAACT AGGAAGCCAGGATGGCGACTCGGAGCAAGAAGACGTCAACT < 41bp 0.550106413902488 0.816699060234109 0.55793166 0.91223 prediction 0.533185292663241 Functional Gain - SMC5 ENSG00000198887 CDS Human protein_coding chr9:72874004 chr9:72874005 nonsynonymous SNV 0.730 1 22 hm5C_associated_SNPs_105479 0 0 4 DDX3X POSTAR2 ENCODE chr9:72873906-72874008
64251 chr19 41829990 41829990 1 + C G rs558383992 41829989 + 41829969 41830009 41 GAGTCCACGGTTCCTGACCTCCGAGCCTCAGCTATGCCCTC GAGTCCACGGTTCCTGACCTCGGAGCCTCAGCTATGCCCTC < 41bp 0.509191352695941 0.775760091240647 0.8695239 0.92490155 prediction 0.533137477089412 Functional Gain - CCDC97 ENSG00000142039 UTR3 Human protein_coding chr19:41829989 chr19:41829990 . . 0 22 hm5C_associated_SNPs_105485 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:41829953-41830004
64251 chr19 49132520 49132520 1 + C G SKCM 49132516 + 49132496 49132536 41 TCCCAAGGCAGCTCTACACTCACCCGTCTCCGAAGGGGCCC TCCCAAGGCAGCTCTACACTCACCGGTCTCCGAAGGGGCCC < 41bp 0.482743707881768 0.766568025668865 0.24248138 0.36866552 prediction 0.533136051337729 Functional Gain - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132516 chr19:49132520 synonymous SNV . 0 25 hm5C_associated_SNPs_105487 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:49132460-49132520
64251 chr1 46740259 46740259 1 + T C UCEC 46740257 + 46740237 46740277 41 AGCAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCTAA AGCAAAGCTGGGGGCTGTGGCCCCAATCTCATTGGGGCTAA < 41bp 0.480943737489579 0.766542455957652 0.824342 0.55681264 prediction 0.533084911915304 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46740257 chr1:46740259 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_105491 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:46740247-46740270
64251 chr11 124959175 124959175 1 + C G rs6590129 124959171 + 124959151 124959191 41 GTCGGGGCTTGGCTTGGCAGCGAGCGAGGCTGGCATGGGGT GTCGGGGCTTGGCTTGGCAGCGAGGGAGGCTGGCATGGGGT < 41bp 0.488651775113633 0.766536457090002 0.8484708 0.94605565 prediction 0.533072914180003 Functional Gain - SLC37A2 ENSG00000203306 ncRNA_exonic Human other chr11:124959171 chr11:124959175 . . 0 25 hm5C_associated_SNPs_105492 0 0 1 DGCR8 POSTAR2 ENCODE chr11:124959168-124959197
64251 chr21 48069603 48069603 1 + C G rs148075005 48069602 + 48069582 48069622 41 GGTGGAGGATGTGGTGCTGCCCGAGAAGGTGGACGTGCTGG GGTGGAGGATGTGGTGCTGCCGGAGAAGGTGGACGTGCTGG < 41bp 0.561641829336595 0.828167107815838 0.07319301 0.79769576 prediction 0.533050556958485 Functional Gain - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48069602 chr21:48069603 synonymous SNV . 0 22 hm5C_associated_SNPs_105493 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:48069564-48069626
64251 chr20 372062 372062 1 + T G GBM 372060 + 372040 372080 41 ACGCCTTTTTCACTCGGACCCATGGGGACATGCACAGCCTG ACGCCTTTTTCACTCGGACCCAGGGGGACATGCACAGCCTG < 41bp 0.6240916750833 0.890607766054377 0.88282907 0.94984245 prediction 0.533032181942153 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:372060 chr20:372062 nonsynonymous SNV 0.018 1 23 hm5C_associated_SNPs_105494 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:372025-372064
64251 chr16 56865830 56865830 1 + C A rs145146218 56865826 + 56865806 56865846 41 AGGAACAATACAGATCCCTACAAGCGGGCCGTGTACTGTAT AGGAACAATACAGATCCCTACAAGAGGGCCGTGTACTGTAT < 41bp 0.348620952204497 0.766509825195897 0.19367489 0.1805357 prediction 0.533019650391794 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56865826 chr16:56865830 synonymous SNV . 0 25 hm5C_associated_SNPs_105495 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:56865816-56865843
64251 chr3 122821308 122821308 1 + C G rs377598783 122821307 + 122821287 122821327 41 AGATGAAAGTTGACCTGAGCCCGAAGGACAAAAAGGTTGAA AGATGAAAGTTGACCTGAGCCGGAAGGACAAAAAGGTTGAA < 41bp 0.46271686459264 0.766475427509799 0.3096363 0.6593 prediction 0.532950855019599 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122821307 chr3:122821308 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_105501 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:122821277-122821315
64251 chr16 23700057 23700057 1 + T A GBM 23700053 + 23700033 23700073 41 AAGTGGGTGGACTATTCGGACAAGTACGGCCTTGGTAGGTT AAGTGGGTGGACTATTCGGACAAGAACGGCCTTGGTAGGTT < 41bp 0.45329323767192 0.766471078612649 0.3691654 0.3828365 prediction 0.532942157225298 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700053 chr16:23700057 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_105503 0 0 37 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:23700000-23700066
64251 chr19 17453371 17453371 1 + C A rs148120864 17453367 + 17453347 17453387 41 GGATCACAGGCGTGAGCTATCACACCTGGCCCCAGAAGTGT GGATCACAGGCGTGAGCTATCACAACTGGCCCCAGAAGTGT < 41bp 0.425936691374214 0.766447930629928 0.316117 0.2826132 prediction 0.532895861259856 Functional Gain - GTPBP3 ENSG00000130299 UTR3 Human protein_coding chr19:17453367 chr19:17453371 . . 0 25 hm5C_associated_SNPs_105505 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17453337-17453535
64251 chr3 128060548 128060548 1 + T G COAD 128060546 + 128060526 128060566 41 CTGGTGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCTGTG CTGGTGGAGTTTGAGAAGCCCGGCACCTGCCCTCGGCTGTG < 41bp 0.451909250984694 0.76643096596437 0.20299298 0.524813 prediction 0.532861931928741 Functional Gain - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:128060546 chr3:128060548 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_105508 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:128060543-128060564
64251 chr10 28966845 28966845 1 + T A OV 28966841 + 28966821 28966861 41 GCGTCAATGGATCGCCACTCCAGCTACATCTTCATCTGGCT GCGTCAATGGATCGCCACTCCAGCAACATCTTCATCTGGCT < 41bp 0.559752927620518 0.826176740241792 0.012589604 0.010827452 prediction 0.532847625242548 Functional Gain - BAMBI ENSG00000095739 CDS Human protein_coding chr10:28966841 chr10:28966845 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_105510 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:28966834-28966857
64251 chr19 35741319 35741319 1 + C T UCEC 35741318 + 35741298 35741338 41 ACCTACCAGATGACCTCGACCCCCACGCAACCCATCGTCAT ACCTACCAGATGACCTCGACCTCCACGCAACCCATCGTCAT < 41bp 0.500117862591681 0.766535216259101 0.017440915 0.8877196 prediction 0.53283470733484 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35741318 chr19:35741319 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_105512 0 0 2 DDX3X POSTAR2 ENCODE chr19:35741260-35741324
64251 chr16 28909608 28909608 1 + C A STAD 28909604 + 28909584 28909624 41 AACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGG AACTATGTGCGAGTTGGCACCACCAGGGTGCCACTGACGGG < 41bp 0.346713370841782 0.766396423768835 0.020979643 0.08033463 prediction 0.53279284753767 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28909604 chr16:28909608 synonymous SNV . 0 25 hm5C_associated_SNPs_105519 0 0 1 FASTKD2 POSTAR2 ENCODE chr16:28909553-28909672
64251 chr3 14485310 14485310 1 + C G rs41284011 14485306 + 14485286 14485326 41 CGACTTTGTGCTCTCTGTGGCTGGCGGCTTCGTGGGCTTGG CGACTTTGTGCTCTCTGTGGCTGGGGGCTTCGTGGGCTTGG < 41bp 0.524853088053836 0.791198850134349 0.47860837 0.8922757 prediction 0.532691524161026 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14485306 chr3:14485310 synonymous SNV . 0 25 hm5C_associated_SNPs_105521 0 0 3 RBM15 POSTAR2 ENCODE chr3:14485298-14485350
64251 chr2 176982255 176982255 1 + C A LUSC 176982251 + 176982231 176982271 41 GGCCTTCCCGAAGAGAGGAGCTGCCTGGCTGAGGTCTCCGT GGCCTTCCCGAAGAGAGGAGCTGCATGGCTGAGGTCTCCGT < 41bp 0.370196772018486 0.766294555579462 0.2311869 0.30360037 prediction 0.532589111158924 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982251 chr2:176982255 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_105525 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:176982240-176982260
64251 chr10 81682463 81682463 1 + T G rs45550832 81682461 + 81682441 81682481 41 ATGTCTGGGAAGAAGCTTTTCGTGACCAATGGTGAGCGGAT ATGTCTGGGAAGAAGCTTTTCGGGACCAATGGTGAGCGGAT < 41bp 0.446405947851652 0.766285654951678 0.1663911 0.9079562 prediction 0.532571309903356 Functional Gain - MBL1P ENSG00000242600 ncRNA_exonic Human transcribed_unitary_pseudogene chr10:81682461 chr10:81682463 . . 0 23 hm5C_associated_SNPs_105526 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:81682462-81682485
64251 chr6 7403056 7403056 1 + T G UCEC 7403054 + 7403034 7403074 41 ATTTTTCTTATTCAAGATTTCGTCATGGCTATTGTAAAGGA ATTTTTCTTATTCAAGATTTCGGCATGGCTATTGTAAAGGA < 41bp 0.469390232268048 0.766277650721327 0.07754189 0.33500886 prediction 0.532555301442654 Functional Gain - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7403054 chr6:7403056 synonymous SNV . 0 23 hm5C_associated_SNPs_105529 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:7403039-7403079
64251 chr19 2245452 2245452 1 + C A KIRP 2245448 + 2245428 2245468 41 CTCCATCCTGTCCGCAGGGCCCGGCGAGCAGCCAAGGAGGC CTCCATCCTGTCCGCAGGGCCCGGAGAGCAGCCAAGGAGGC < 41bp 0.392190227303545 0.766273477126813 0.50751126 0.54557985 prediction 0.532546954253626 Functional Gain - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2245448 chr19:2245452 synonymous SNV . 0 25 hm5C_associated_SNPs_105530 0 0 9 BUD13 POSTAR2 ENCODE chr19:2245415-2245472
64251 chr1 169094257 169094257 1 + T G KIRP 169094255 + 169094235 169094275 41 GATTCAGCCCAGAGGGATGACATGATTTTTGAAGATTGTGG GATTCAGCCCAGAGGGATGACAGGATTTTTGAAGATTGTGG < 41bp 0.59227489147532 0.858541841958445 0.039584607 0.11555505 prediction 0.532533900966251 Functional Gain - ATP1B1 ENSG00000143153 CDS Human protein_coding chr1:169094255 chr1:169094257 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_105531 0 0 4 LIN28B POSTAR2 ENCODE chr1:169094255-169094277
64251 chr16 2757937 2757937 1 + C G rs74969856 2757936 + 2757916 2757956 41 CCAACCCCACCTGACCAAGCCCGGGACAGTCAAGGCTTCTC CCAACCCCACCTGACCAAGCCGGGGACAGTCAAGGCTTCTC < 41bp 0.55973192664149 0.825980634430443 0.6038097 0.9012949 prediction 0.532497415577906 Functional Gain - KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2757936 chr16:2757937 . . 0 22 hm5C_associated_SNPs_105534 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2757880-2757943
64251 chr19 36277855 36277855 1 + C G rs199669285 36277854 + 36277834 36277874 41 CCCCAACACCAGCTCTCAGCCCCGGCCGGAGCCTGCGCCCC CCCCAACACCAGCTCTCAGCCGCGGCCGGAGCCTGCGCCCC < 41bp 0.574329809515484 0.840560614057476 0.10533208 0.49752286 prediction 0.532461609083984 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277854 chr19:36277855 nonsynonymous SNV 0.511 0 22 hm5C_associated_SNPs_105535 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:36277845-36277889
64251 chr19 58117636 58117636 1 + T C UCEC 58117634 + 58117614 58117654 41 TGCAGTGAATGTGGGAAATCCTTTAGTCAAAGTTCTGGCTT TGCAGTGAATGTGGGAAATCCTCTAGTCAAAGTTCTGGCTT < 41bp 0.507694215696795 0.773915487803089 0.089946955 0.8846841 prediction 0.532442544212588 Functional Gain - ZNF530 ENSG00000183647 CDS Human protein_coding chr19:58117634 chr19:58117636 nonsynonymous SNV 0.012 3 23 hm5C_associated_SNPs_105536 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:58117590-58117642
64251 chr6 149915654 149915654 1 + T A rs9765961 149915650 + 149915630 149915670 41 AGACCACAGGCTGCCGTGGCCGCATCGTGGGTGTGTCTAAG AGACCACAGGCTGCCGTGGCCGCAACGTGGGTGTGTCTAAG < 41bp 0.548031208081217 0.814243873007582 0.16481763 0.25510693 prediction 0.53242532985273 Functional Gain - RPS18P9 ENSG00000220848 ncRNA_exonic Human processed_pseudogene chr6:149915650 chr6:149915654 . . 0 25 hm5C_associated_SNPs_105539 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:149915651-149915738
64251 chr7 16793471 16793471 1 + C A rs561850660 16793467 + 16793447 16793487 41 CTGCAGCCCCAGGCCCCGGCCCCCCACCCACGTCTGCGTTG CTGCAGCCCCAGGCCCCGGCCCCCAACCCACGTCTGCGTTG < 41bp 0.449078322696503 0.766202322113549 0.2307348 0.4218958 prediction 0.532404644227099 Functional Gain - TSPAN13 ENSG00000106537 UTR5 Human protein_coding chr7:16793467 chr7:16793471 . . 0 25 hm5C_associated_SNPs_105540 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:16793460-16793500
64251 chr8 144343999 144343999 1 + C A rs571715172 144343995 + 144343975 144344015 41 ACCCGCACCCCTGCACCTGCCACGCCTGTCTCCGGCAGCCC ACCCGCACCCCTGCACCTGCCACGACTGTCTCCGGCAGCCC < 41bp 0.456745403824349 0.766151739822514 0.11618808 0.14457077 prediction 0.532303479645029 Functional Gain - ZFP41 ENSG00000181638 UTR3 Human protein_coding chr8:144343995 chr8:144343999 . . 0 25 hm5C_associated_SNPs_105543 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:144343984-144344015
64251 chr2 26502945 26502945 1 + C A HNSC 26502941 + 26502921 26502961 41 AAACTAAAACCTGCATTCATCAAGCCCTACGGCACAGTGAC AAACTAAAACCTGCATTCATCAAGACCTACGGCACAGTGAC < 41bp 0.357573133739398 0.766065110043802 0.58022785 0.7624316 prediction 0.532130220087604 Functional Gain - HADHB ENSG00000138029 CDS Human protein_coding chr2:26502941 chr2:26502945 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_105555 0 0 3 DDX24 POSTAR2 ENCODE chr2:26502908-26502980
64251 chr19 2852732 2852732 1 + T G UCEC 2852729 + 2852709 2852749 41 AATCGGCATGTAAGGATTCACACTGCTGAGAAAACCTACGA AATCGGCATGTAAGGATTCACACGGCTGAGAAAACCTACGA < 41bp 0.397391721810939 0.766064240243913 0.11393222 0.25827354 prediction 0.532128480487825 Functional Gain - ZNF555 ENSG00000186300 CDS Human protein_coding chr19:2852729 chr19:2852732 synonymous SNV . 0 24 hm5C_associated_SNPs_105556 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:2852708-2852738
64251 chr10 75542205 75542205 1 + C G UCEC 75542204 + 75542184 75542224 41 TGCCGCGAGGGCTCAGGTGACCGATGGCTCCTGGGGTGCTT TGCCGCGAGGGCTCAGGTGACGGATGGCTCCTGGGGTGCTT < 41bp 0.572890071526189 0.838947603277512 0.4723808 0.86304677 prediction 0.532115063502647 Functional Gain - CHCHD1 ENSG00000172586 CDS Human protein_coding chr10:75542204 chr10:75542205 synonymous SNV . 0 22 hm5C_associated_SNPs_105557 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:75542124-75542206
64251 chr11 17373464 17373464 1 + C A rs72865007 17373460 + 17373440 17373480 41 TCTCCCCCTGCCCTTGGTTTCTACCGGGCCGCCTGCTCCCA TCTCCCCCTGCCCTTGGTTTCTACAGGGCCGCCTGCTCCCA < 41bp 0.473466239120127 0.766025580900594 0.032815933 0.9347009 prediction 0.532051161801189 Functional Gain - NCR3LG1 ENSG00000188211 UTR5 Human protein_coding chr11:17373460 chr11:17373464 . . 0 25 hm5C_associated_SNPs_105559 0 0 2 NCBP2 POSTAR2 ENCODE chr11:17373317-17373468
64251 chr5 90676606 90676606 1 + C G rs138968758 90676605 + 90676585 90676625 41 GCCATCCAGCACCTGTAAGGCCGGCAGGAGCGTCTGCCCTC GCCATCCAGCACCTGTAAGGCGGGCAGGAGCGTCTGCCCTC < 41bp 0.55001642201487 0.815967610526019 0.16505632 0.3994956 prediction 0.531902377022298 Functional Gain - ARRDC3-AS1 ENSG00000113369 intronic Human protein_coding chr5:90676605 chr5:90676606 . . 0 22 hm5C_associated_SNPs_105565 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:90676601-90676635
64251 chr19 7978718 7978718 1 + C G rs184711481 7978717 + 7978697 7978737 41 CAACACCAAAGGCGCAGAAGCCGGCTGGCCGTGGTGGGGGC CAACACCAAAGGCGCAGAAGCGGGCTGGCCGTGGTGGGGGC < 41bp 0.497190344871802 0.765924860718762 0.39048755 0.87489885 prediction 0.531849721437524 Functional Gain - MAP2K7 ENSG00000076984 UTR3 Human protein_coding chr19:7978717 chr19:7978718 . . 0 22 hm5C_associated_SNPs_105567 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7978690-7978719
64251 chr20 29625891 29625891 1 + C G BLCA 29625887 + 29625867 29625907 41 GTACAGAATCGCCCTGAAATCTGGCTATGGAAAATATCTTG GTACAGAATCGCCCTGAAATCTGGGTATGGAAAATATCTTG < 41bp 0.512910976097434 0.778821919902406 0.24666002 0.5965749 prediction 0.531821887609944 Functional Gain - FRG1BP;FRG1DP ENSG00000149531 CDS Human unprocessed_pseudogene chr20:29625887 chr20:29625891 synonymous SNV . 0 25 hm5C_associated_SNPs_105573 0 0 2 DDX24 POSTAR2 ENCODE chr20:29625870-29625927
64251 chr15 29398898 29398898 1 + C A HNSC 29398894 + 29398874 29398914 41 CCATCCTGCCCACGGTGATCCTGGCCAACATGATGAATGGC CCATCCTGCCCACGGTGATCCTGGACAACATGATGAATGGC < 41bp 0.35810285232838 0.765835591683468 0.8289125 0.8267596 prediction 0.531671183366936 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29398894 chr15:29398898 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_105581 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:29398897-29398920
64251 chr2 242501798 242501798 1 + C A UCEC 242501794 + 242501774 242501814 41 GAGATGATCCGGCCCAGCGTCTACCGCAACGTGGCGCGTCA GAGATGATCCGGCCCAGCGTCTACAGCAACGTGGCGCGTCA < 41bp 0.341507153919417 0.765828498164231 0.332013 0.9201411 prediction 0.531656996328463 Functional Gain - BOK ENSG00000176720 CDS Human protein_coding chr2:242501794 chr2:242501798 nonsynonymous SNV 0.959 3 25 hm5C_associated_SNPs_105583 0 0 2 DDX3X POSTAR2 ENCODE chr2:242501762-242501806
64251 chr12 51449970 51449970 1 + T G KIRC 51449967 + 51449947 51449987 41 AGCAATACATGATATCTTGGCTCTGAGAGAGTGTTTCTCTA AGCAATACATGATATCTTGGCTCGGAGAGAGTGTTTCTCTA < 41bp 0.388750491270889 0.765818071484068 0.051724374 0.11347622 prediction 0.531636142968136 Functional Gain - LETMD1 ENSG00000050426 CDS Human protein_coding chr12:51449967 chr12:51449970 nonsynonymous SNV 0.147 3 24 hm5C_associated_SNPs_105587 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:51449952-51449980
64251 chr8 11142157 11142157 1 + C G rs73537130 11142156 + 11142136 11142176 41 CGAGTCCTAGGCCTGGTGAACCGCGCGGTGCGGGAGAGGCG CGAGTCCTAGGCCTGGTGAACGGCGCGGTGCGGGAGAGGCG < 41bp 0.547488764944454 0.813257670328775 0.35238048 0.54407626 prediction 0.531537810768643 Functional Gain - MTMR9 ENSG00000104643 UTR5 Human protein_coding chr8:11142156 chr8:11142157 . . 0 22 hm5C_associated_SNPs_105600 0 0 1 DDX3X POSTAR2 ENCODE chr8:11142129-11142176
64251 chr2 74757856 74757856 1 + C G BLCA 74757855 + 74757835 74757875 41 GTGGCTGATCGGCGCAGAGTCCGTGTGAGACTGCTAAGCGG GTGGCTGATCGGCGCAGAGTCGGTGTGAGACTGCTAAGCGG < 41bp 0.572769424824412 0.838536442941863 0.10009354 0.30194044 prediction 0.531534036234903 Functional Gain - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757855 chr2:74757856 nonsynonymous SNV 0.968 5 22 hm5C_associated_SNPs_105601 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr2:74757852-74757883
64251 chr17 4837132 4837132 1 - A C rs12940222 4837135 - 4837115 4837155 41 GGGGCGGGCTCTGAGGTGGGCTCTGGGGTGGTCGGGCTTGG GGGGCGGGCTCTGAGGTGGGCTCGGGGGTGGTCGGGCTTGG < 41bp 0.62969655434983 0.895456744206386 0.2732958 0.3314787 prediction 0.531520379713112 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4837135 chr17:4837132 synonymous SNV . 0 24 hm5C_associated_SNPs_105602 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:4837114-4837134
64251 chr19 35760495 35760495 1 + C G LUAD 35760491 + 35760471 35760511 41 TCCTCGGCCCCAGGCGGGGACGGCCCAGGAGCGGAGGAGCA TCCTCGGCCCCAGGCGGGGACGGCGCAGGAGCGGAGGAGCA < 41bp 0.487752746425647 0.765751268057611 0.63240033 0.89665043 prediction 0.531502536115222 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35760491 chr19:35760495 nonsynonymous SNV 0.957 1 25 hm5C_associated_SNPs_105603 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:35760480-35760500
64251 chr1 44437275 44437275 1 + T C STAD 44437273 + 44437253 44437293 41 GACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTCTTGGG GACCCAGACCTTGACCCAGACCCGAGTCGGCTGCTCTTGGG < 41bp 0.518630197473965 0.784375044702475 0.43206167 0.3776028 prediction 0.53148969445702 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437273 chr1:44437275 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_105604 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:44437269-44437282
64251 chr14 64909059 64909059 1 + C G PRAD 64909058 + 64909038 64909078 41 GCCGGTATTCCGGCCTCTGCCCCCACGTGGTGGTGCTTGTT GCCGGTATTCCGGCCTCTGCCGCCACGTGGTGGTGCTTGTT < 41bp 0.457371511176488 0.765730825783734 0.21671358 0.84266925 prediction 0.531461651567467 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909058 chr14:64909059 nonsynonymous SNV 0.895 4 22 hm5C_associated_SNPs_105606 0 0 12 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:64909020-64909060
64251 chr1 150131575 150131575 1 + T C LUAD 150131573 + 150131553 150131593 41 GGAACGGCTGCTGGGAGAGGCATCATCGAATTGGAGCCAGG GGAACGGCTGCTGGGAGAGGCACCATCGAATTGGAGCCAGG < 41bp 0.501094499839627 0.766806705631077 0.22925422 0.17106038 prediction 0.531424411582899 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131573 chr1:150131575 nonsynonymous SNV 0.321 0 23 hm5C_associated_SNPs_105607 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr1:150131550-150131575
64251 chr11 71707755 71707755 1 + C G rs565286944 71707751 + 71707731 71707771 41 TCCCAGGTAGCTGAAGGCCTCAGCCCACCCACTCCCTTCTT TCCCAGGTAGCTGAAGGCCTCAGCGCACCCACTCCCTTCTT < 41bp 0.552711600934181 0.818422486268922 0.22227615 0.48088622 prediction 0.531421770669481 Functional Gain - RNF121 ENSG00000137522 UTR3 Human protein_coding chr11:71707751 chr11:71707755 . . 0 25 hm5C_associated_SNPs_105609 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:71707690-71707755
64251 chr19 49379025 49379025 1 + T G LUAD 49379023 + 49379003 49379043 41 CAGGAGGAGCTGAGCCCCTGCCTCACCCCTGCTGCCCGGGC CAGGAGGAGCTGAGCCCCTGCCGCACCCCTGCTGCCCGGGC < 41bp 0.435288035490305 0.765685174137881 0.098332286 0.13418695 prediction 0.531370348275762 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49379023 chr19:49379025 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_105611 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:49379024-49379025
64251 chr15 56704567 56704567 1 + T G rs138888960 56704565 + 56704545 56704585 41 CAAAGTGCCACAGAGGTTCGCTTGAATAGAGCTCTAGAAGA CAAAGTGCCACAGAGGTTCGCTGGAATAGAGCTCTAGAAGA < 41bp 0.447058111430754 0.765684383773953 0.02050078 0.11611235 prediction 0.531368767547907 Functional Gain - TEX9 ENSG00000151575 CDS Human protein_coding chr15:56704565 chr15:56704567 nonsynonymous SNV 0.997 5 23 hm5C_associated_SNPs_105612 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:56704549-56704582
64251 chr1 154241327 154241327 1 + C A UCEC 154241323 + 154241303 154241343 41 GAAGTGGGGGCCCCATCAATCCGGCCACAGCTGCTGCCTAC GAAGTGGGGGCCCCATCAATCCGGACACAGCTGCTGCCTAC < 41bp 0.642625002535597 0.908251550789409 0.9133182 0.89332396 prediction 0.531253096507624 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154241323 chr1:154241327 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_105620 0 0 2 IGF2BP2 POSTAR2 ENCODE chr1:154241284-154241401
64251 chr1 154296764 154296764 1 + T A LUSC 154296760 + 154296740 154296780 41 ACTGTCCTTCTTTTGCAGTGCTGGTAATGGCTGGTGGTGGG ACTGTCCTTCTTTTGCAGTGCTGGAAATGGCTGGTGGTGGG < 41bp 0.56850208549524 0.834127366323503 0.15103012 0.16852391 prediction 0.531250561656528 Functional Gain - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154296760 chr1:154296764 synonymous SNV . 0 25 hm5C_associated_SNPs_105621 0 0 1 SF3B1 POSTAR2 ENCODE chr1:154296753-154296797
64251 chr16 56485554 56485554 1 + C G rs11076155 56485550 + 56485530 56485570 41 TGGGAAGCGGCCAGCGGAGCCCGGCCCAGCCCGGGTGGGAA TGGGAAGCGGCCAGCGGAGCCCGGGCCAGCCCGGGTGGGAA < 41bp 0.532836186705461 0.798439983261128 0.36133948 0.7783195 prediction 0.531207593111334 Functional Gain - OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56485550 chr16:56485554 synonymous SNV . 0 25 hm5C_associated_SNPs_105626 0 0 10 U2AF2 POSTAR2 GSE83923,CSM2221660 chr16:56485554-56485555
64251 chr12 3129865 3129865 1 + C G HNSC 3129864 + 3129844 3129884 41 CCGGCACCCCCATGGCAGGGCCGCAGCGTGGCCAGCTCCAA CCGGCACCCCCATGGCAGGGCGGCAGCGTGGCCAGCTCCAA < 41bp 0.579311973622567 0.844892232297963 0.25589263 0.48071894 prediction 0.531160517350792 Functional Gain - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3129864 chr12:3129865 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_105633 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:3129836-3129876
64251 chr2 27280180 27280180 1 + T C STAD 27280178 + 27280158 27280198 41 CTTTATGTCTTAGCTACACACTTGAATGCAACTACAACACT CTTTATGTCTTAGCTACACACTCGAATGCAACTACAACACT < 41bp 0.53150958210045 0.797026448148935 0.10574561 0.46990594 prediction 0.531033732096971 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27280178 chr2:27280180 synonymous SNV . 0 23 hm5C_associated_SNPs_105637 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:27280180-27280198
64251 chr20 31021672 31021672 1 + C G BLCA 31021671 + 31021651 31021691 41 CACAATTGAAAGTGTTCACACCGAAAAGCCACAGCCCACTA CACAATTGAAAGTGTTCACACGGAAAAGCCACAGCCCACTA < 41bp 0.456735100234204 0.765504411389283 0.08732656 0.45229912 prediction 0.531008822778565 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31021671 chr20:31021672 synonymous SNV . 0 22 hm5C_associated_SNPs_105640 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:31021648-31021673
64251 chr10 105201628 105201628 1 + T C UCEC 105201626 + 105201606 105201646 41 AGCGCCCCGGCTGCAGCTGTCTTCAGGCTTCGCTTGGAATG AGCGCCCCGGCTGCAGCTGTCTCCAGGCTTCGCTTGGAATG < 41bp 0.470700602518415 0.765495332037589 0.12622273 0.9128132 prediction 0.530990664075178 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105201626 chr10:105201628 nonsynonymous SNV 0.015 1 23 hm5C_associated_SNPs_105643 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:105201622-105201660
64251 chr4 79697870 79697870 1 + C A rs149914551 79697866 + 79697846 79697886 41 AGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTACGGGCGCC AGGTCACCCTGGAAGAGTCGCTGGACGAAGGTACGGGCGCC < 41bp 0.635633250412544 0.901122897223695 0.17804691 0.5385068 prediction 0.530979293622302 Functional Gain - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79697866 chr4:79697870 nonsynonymous SNV 0.993 3 25 hm5C_associated_SNPs_105647 0 1 1 DDX24 POSTAR2 ENCODE chr4:79697800-79697874
64251 chr13 88329518 88329518 1 + C A UCEC 88329514 + 88329494 88329534 41 TGTAGTAGTTTCCACGCCCACACCCTCCTCTATCCAGGTCC TGTAGTAGTTTCCACGCCCACACCATCCTCTATCCAGGTCC < 41bp 0.343977455218204 0.765433923822983 0.016239345 0.026329726 prediction 0.530867847645966 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88329514 chr13:88329518 synonymous SNV . 0 25 hm5C_associated_SNPs_105655 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88329500-88329540
64251 chr16 2255787 2255787 1 + C A rs574093429 2255783 + 2255763 2255803 41 AGTGGCGCCCGCGCGTGACTCCCCCCTGCCGGCTGCGGAGG AGTGGCGCCCGCGCGTGACTCCCCACTGCCGGCTGCGGAGG < 41bp 0.442978401727753 0.76541598322476 0.16496441 0.11700824 prediction 0.530831966449519 Functional Gain - MLST8 ENSG00000167965 UTR5 Human protein_coding chr16:2255783 chr16:2255787 . . 0 25 hm5C_associated_SNPs_105657 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2255764-2255793
64251 chrX 70444034 70444034 1 + C A UCEC 70444030 + 70444010 70444050 41 TGTCTTTTATCTGCTCTACCCTGGCTATGCCATGGTGCGGC TGTCTTTTATCTGCTCTACCCTGGATATGCCATGGTGCGGC < 41bp 0.654218738932326 0.919621463605077 0.43277755 0.48346725 prediction 0.530805449345501 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444030 chrX:70444034 synonymous SNV . 0 25 hm5C_associated_SNPs_105660 0 0 5 RBM15 POSTAR2 ENCODE chrX:70444024-70444052
64251 chr16 66426177 66426177 1 + C T SKCM 66426176 + 66426156 66426196 41 ATCACAGATGTGGACGAGCCCCCCATTTTCCAGCAGCCTTT ATCACAGATGTGGACGAGCCCTCCATTTTCCAGCAGCCTTT < 41bp 0.497575428820445 0.76535667846697 0.060181588 0.927325 prediction 0.530713356933939 Functional Gain - CDH5 ENSG00000179776 CDS Human protein_coding chr16:66426176 chr16:66426177 nonsynonymous SNV 0.495 3 22 hm5C_associated_SNPs_105665 0 0 3 SSB POSTAR2 GSE95683,GSM2521599 chr16:66426160-66426180
64251 chr11 18344181 18344181 1 + C A rs532426961 18344177 + 18344157 18344197 41 AGAGGCGGTGGCTACTGCTGCGGCCACTGGGTTTCGGCCTC AGAGGCGGTGGCTACTGCTGCGGCAACTGGGTTTCGGCCTC < 41bp 0.599307554701381 0.864651180526813 0.8421534 0.87779385 prediction 0.530687251650865 Functional Gain - GTF2H1 ENSG00000110768 UTR5 Human protein_coding chr11:18344177 chr11:18344181 . . 0 25 hm5C_associated_SNPs_105667 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:18344158-18344183
64251 chr2 64796343 64796343 1 + C G LUSC 64796342 + 64796322 64796362 41 GTCCTCCTTGGGAATAGACACCCGAAACATTGTGAGTTTGT GTCCTCCTTGGGAATAGACACGCGAAACATTGTGAGTTTGT < 41bp 0.471809661095743 0.765339500468482 0.3355438 0.836524 prediction 0.530679000936963 Functional Gain - AFTPH ENSG00000119844 CDS Human protein_coding chr2:64796342 chr2:64796343 synonymous SNV . 0 22 hm5C_associated_SNPs_105668 0 0 2 CDC40 POSTAR2 ENCODE chr2:64796298-64796401
64251 chr10 13246284 13246284 1 + T C rs2277221 13246282 + 13246262 13246302 41 AGCAGCATGAATACCACTGGCATGATGGTGTGAAGAGGTTT AGCAGCATGAATACCACTGGCACGATGGTGTGAAGAGGTTT < 41bp 0.487356480519544 0.765334430749722 0.14411098 0.09579897 prediction 0.530668861499444 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13246282 chr10:13246284 synonymous SNV . 0 23 hm5C_associated_SNPs_105670 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:13246269-13246297
64251 chr2 138759693 138759693 1 + T C UCEC 138759691 + 138759671 138759711 41 GTTTGCTTGGCATAAGGAGACATCATCTGAATACCAAAGTA GTTTGCTTGGCATAAGGAGACACCATCTGAATACCAAAGTA < 41bp 0.539999599450828 0.805253224363552 0.04151559 0.028250992 prediction 0.530507249825448 Functional Gain - HNMT ENSG00000150540 CDS Human protein_coding chr2:138759691 chr2:138759693 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105681 0 0 2 GRWD1 POSTAR2 ENCODE chr2:138759691-138759724
64251 chr2 47612313 47612313 1 + C G LUSC 47612312 + 47612292 47612332 41 TTCTTCCACTCAGGTTATTTCCAGAAAGAAGAGAATGGCAA TTCTTCCACTCAGGTTATTTCGAGAAAGAAGAGAATGGCAA < 41bp 0.564590199032928 0.829785028884813 0.19598532 0.7750562 prediction 0.53038965970377 Functional Gain - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47612312 chr2:47612313 synonymous SNV . 0 22 hm5C_associated_SNPs_105684 0 0 2 SF3B1 POSTAR2 ENCODE chr2:47612312-47612339
64251 chr17 40705550 40705550 1 + T G STAD 40705547 + 40705527 40705567 41 GGACGTGAATGTAGTAGGGACTGTGCGGATGCTGCAGGCCT GGACGTGAATGTAGTAGGGACTGGGCGGATGCTGCAGGCCT < 41bp 0.364021298814279 0.765159319830367 0.38328174 0.8444768 prediction 0.530318639660735 Functional Gain - HSD17B1 ENSG00000108786 CDS Human protein_coding chr17:40705547 chr17:40705550 nonsynonymous SNV 0.081 3 24 hm5C_associated_SNPs_105690 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr17:40705545-40705574
64251 chr14 64989463 64989463 1 + T G STAD 64989460 + 64989440 64989480 41 GCCCCCTAACAACAGCAGTCCAGTACAAGAGGATGCTGAAA GCCCCCTAACAACAGCAGTCCAGGACAAGAGGATGCTGAAA < 41bp 0.391818009805524 0.765145793068253 0.21211773 0.4163041 prediction 0.530291586136505 Functional Gain - ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64989460 chr14:64989463 nonsynonymous SNV 0.978 0 24 hm5C_associated_SNPs_105694 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr14:64989455-64989476
64251 chr17 34941826 34941826 1 + T C UCEC 34941824 + 34941804 34941844 41 AATTGTTACCAATGAAAATACATCATGTACCTGTCCTAGCA AATTGTTACCAATGAAAATACACCATGTACCTGTCCTAGCA < 41bp 0.546573336635659 0.811645827048703 0.014350891 0.009677023 prediction 0.530144980826087 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34941824 chr17:34941826 nonsynonymous SNV 0.986 1 23 hm5C_associated_SNPs_105701 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:34941805-34941843
64251 chr2 27275949 27275949 1 + C A ESCA 27275945 + 27275925 27275965 41 AGGGGTAGGAGGTGGGGCGTCAGCCCTGACCAGTGGCATTG AGGGGTAGGAGGTGGGGCGTCAGCACTGACCAGTGGCATTG < 41bp 0.651046293151638 0.91611108354787 0.80930114 0.7575926 prediction 0.530129580792464 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27275945 chr2:27275949 synonymous SNV . 0 25 hm5C_associated_SNPs_105706 0 0 1 DDX3X POSTAR2 ENCODE chr2:27275915-27275950
64251 chr1 207818592 207818592 1 + T G KIRP 207818590 + 207818570 207818610 41 GCGCCGCTCATGGCGCCTCCCGTCCGTCTCGAGCGTCCCTT GCGCCGCTCATGGCGCCTCCCGGCCGTCTCGAGCGTCCCTT < 41bp 0.41741611981027 0.765052935320786 0.052748263 0.5504298 prediction 0.530105870641572 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207818590 chr1:207818592 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_105709 0 0 1 IGF2BP2 POSTAR2 ENCODE chr1:207818490-207818616
64251 chr3 150176547 150176547 1 + T G rs144546551 150176544 + 150176524 150176564 41 GGTTGTGTGTTTGGCCTTTTCAGTATTAGACAATCATTCTA GGTTGTGTGTTTGGCCTTTTCAGGATTAGACAATCATTCTA < 41bp 0.421443616171317 0.765048422167868 0.29740876 0.91941845 prediction 0.530096844335736 Functional Gain - TSC22D2 ENSG00000196428 UTR3 Human protein_coding chr3:150176544 chr3:150176547 . . 0 24 hm5C_associated_SNPs_105710 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr3:150176537-150176568
64251 chr10 75527635 75527635 1 + C G LUAD 75527631 + 75527611 75527651 41 AGACAGGTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCC AGACAGGTGCCTATCAGACCCTGGGCAAAGAGTGTGTGGCC < 41bp 0.532207636672783 0.797242957284541 0.07016006 0.34384584 prediction 0.530070641223517 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75527631 chr10:75527635 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_105711 0 0 9 DDX24 POSTAR2 ENCODE chr10:75527598-75527651
64251 chr12 82752386 82752386 1 + C G SARC 82752385 + 82752365 82752405 41 CCCGGTGACCCCGGACCTGCCCACGCTGCGTGCCAAGTTGC CCCGGTGACCCCGGACCTGCCGACGCTGCGTGCCAAGTTGC < 41bp 0.577377425414622 0.842398642353199 0.2898257 0.6033954 prediction 0.530042433877155 Functional Gain - METTL25 ENSG00000127720 CDS Human protein_coding chr12:82752385 chr12:82752386 synonymous SNV . 0 22 hm5C_associated_SNPs_105715 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:82752386-82752387
64251 chr10 112270038 112270038 1 + T G LUSC 112270036 + 112270016 112270056 41 CCAAGGGGAGGCAGCAGGCTCTTCACTGATAGGCCATTTGC CCAAGGGGAGGCAGCAGGCTCTGCACTGATAGGCCATTTGC < 41bp 0.586213540407384 0.85123187305192 0.16101107 0.120687276 prediction 0.530036665289072 Functional Gain - DUSP5 ENSG00000138166 CDS Human protein_coding chr10:112270036 chr10:112270038 nonsynonymous SNV 0.019 0 23 hm5C_associated_SNPs_105716 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:112270015-112270042
64251 chr12 56491687 56491687 1 + C A UCEC 56491683 + 56491663 56491703 41 ATTTTGGTGTGGCTGACCTGCTGCCTCCTGATGATAAGCAG ATTTTGGTGTGGCTGACCTGCTGCATCCTGATGATAAGCAG < 41bp 0.349084645854701 0.764970823052913 0.32947385 0.25411516 prediction 0.529941646105826 Functional Gain - ERBB3 ENSG00000065361 CDS Human protein_coding chr12:56491683 chr12:56491687 nonsynonymous SNV 0.870 1 25 hm5C_associated_SNPs_105727 0 0 2 DDX6 POSTAR2 ENCODE chr12:56491661-56491711
64251 chr7 116380952 116380952 1 + C A SKCM 116380948 + 116380928 116380968 41 GCTTGGGCTGCAGACATTTCCAGTCCTGCAGTCAATGCCTC GCTTGGGCTGCAGACATTTCCAGTACTGCAGTCAATGCCTC < 41bp 0.387902538582189 0.764956713598001 0.25120687 0.1379905 prediction 0.529913427196002 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116380948 chr7:116380952 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_105729 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:116380925-116380961
64251 chr12 1895373 1895373 1 + T G rs758169 1895370 + 1895350 1895390 41 TCGTGGGCTTTGTGACGGCCCAGTGGCTCTGCGTGGTACAT TCGTGGGCTTTGTGACGGCCCAGGGGCTCTGCGTGGTACAT < 41bp 0.384362203347134 0.764945099173315 0.09164274 0.6094264 prediction 0.52989019834663 Functional Gain - ADIPOR2 ENSG00000006831 UTR3 Human protein_coding chr12:1895370 chr12:1895373 . . 0 24 hm5C_associated_SNPs_105730 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:1895360-1895380
64251 chr22 21799327 21799327 1 + T C STAD 21799325 + 21799305 21799345 41 ACCAAGGGCTTCCTGTGTGACGTCATCATCATGGTGGAGAA ACCAAGGGCTTCCTGTGTGACGCCATCATCATGGTGGAGAA < 41bp 0.502748643203064 0.767640687536093 0.028270513 0.025562257 prediction 0.52978408866606 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799325 chr22:21799327 nonsynonymous SNV 0.992 4 23 hm5C_associated_SNPs_105740 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:21799296-21799328
64251 chr9 21854717 21854717 1 + C G ESCA 21854713 + 21854693 21854733 41 ATCGAGGGACCTCGTTTTAGCTCCCGGGCAGAAAGCTTCAT ATCGAGGGACCTCGTTTTAGCTCCGGGGCAGAAAGCTTCAT < 41bp 0.504972539528922 0.769859265852411 0.03737676 0.120518744 prediction 0.529773452646979 Functional Gain - MTAP ENSG00000099810 CDS Human protein_coding chr9:21854713 chr9:21854717 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_105741 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:21854693-21854723
64251 chr16 2580462 2580462 1 + T G BRCA 2580459 + 2580439 2580479 41 GGCTTCTGGAGCCCTCTTGGCTCTGAGGACAGCCACAGTGG GGCTTCTGGAGCCCTCTTGGCTCGGAGGACAGCCACAGTGG < 41bp 0.368171153156553 0.764872345938782 0.28567725 0.5244905 prediction 0.529744691877563 Functional Gain - AMDHD2;CEMP1 ENSG00000162066;ENSG00000205923 CDS Human other chr16:2580459 chr16:2580462 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_105744 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2580445-2580463
64251 chr19 18684538 18684538 1 + C G BLCA 18684534 + 18684514 18684554 41 AGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAG AGCTGGAGGATGGCCGCACTCTCTGAGACTACAACATCCAG < 41bp 0.53547809779178 0.800323112711775 0.0420084 0.044707328 prediction 0.52969002983999 Functional Gain - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18684534 chr19:18684538 stopgain 0.963 1 25 hm5C_associated_SNPs_105749 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:18684473-18684558
64251 chr1 150479482 150479482 1 + T G LUSC 150479479 + 150479459 150479499 41 GGAGTGGGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGC GGAGTGGGACTTGCCTGAGGCTGGGCAGCGACTGGTGGAGC < 41bp 0.375989236536813 0.764809017841133 0.057712346 0.24826378 prediction 0.529618035682265 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150479479 chr1:150479482 nonsynonymous SNV 0.685 3 24 hm5C_associated_SNPs_105751 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150479445-150479493
64251 chr2 11733133 11733133 1 + C G LUSC 11733129 + 11733109 11733149 41 TCATCGAGTGTGCTTACTCCCTGGCCGAGGGCCTCTCCGAG TCATCGAGTGTGCTTACTCCCTGGGCGAGGGCCTCTCCGAG < 41bp 0.547642047731587 0.812442902705952 0.1818994 0.84573615 prediction 0.52960170994873 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11733129 chr2:11733133 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_105752 0 0 2 PPIG POSTAR2 ENCODE chr2:11733102-11733170
64251 chr11 31531364 31531364 1 + C G GBM 31531363 + 31531343 31531383 41 GGCAACCTGCGGTAGTGTTGCCGCGAGTACTGGGTCTGCAG GGCAACCTGCGGTAGTGTTGCGGCGAGTACTGGGTCTGCAG < 41bp 0.555151008012301 0.819949346771954 0.78860873 0.88800824 prediction 0.529596677519308 Functional Gain - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31531363 chr11:31531364 synonymous SNV . 0 22 hm5C_associated_SNPs_105753 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:31531354-31531386
64251 chr13 21720956 21720956 1 + C A rs4620 21720952 + 21720932 21720972 41 AAAAAAATCCAGGATGGATGCAACCTTGAAAGAACTGACAA AAAAAAATCCAGGATGGATGCAACATTGAAAGAACTGACAA < 41bp 0.367109937763293 0.764770298844271 0.033163935 0.07527909 prediction 0.529540597688542 Functional Gain - SAP18 ENSG00000150459 CDS Human protein_coding chr13:21720952 chr13:21720956 synonymous SNV . 0 25 hm5C_associated_SNPs_105754 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:21720940-21720960
64251 chr1 118494980 118494980 1 + T C GBM 118494978 + 118494958 118494998 41 TCTTCACTGCCGGAAAAGATCATAAGATTAAACAGTGGGAT TCTTCACTGCCGGAAAAGATCACAAGATTAAACAGTGGGAT < 41bp 0.503053810269068 0.767810120432668 0.1533575 0.12773448 prediction 0.529512620327201 Functional Gain - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118494978 chr1:118494980 synonymous SNV . 0 23 hm5C_associated_SNPs_105757 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:118494942-118494994
64251 chr20 43118132 43118132 1 + T G UCEC 43118129 + 43118109 43118149 41 AGGGCCTGACCTCAGATGCACAGTGTGACGACTCCTTGCGA AGGGCCTGACCTCAGATGCACAGGGTGACGACTCCTTGCGA < 41bp 0.369487892176925 0.764700062094767 0.12247315 0.9112436 prediction 0.529400124189534 Functional Gain - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43118129 chr20:43118132 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_105765 0 0 1 GRWD1 POSTAR2 ENCODE chr20:43117983-43118143
64251 chr5 140589970 140589970 1 + C A LUAD 140589966 + 140589946 140589986 41 GCTGCTGCCGTCCCAGGACCCGCACCTGCCCCTCGCCTCCC GCTGCTGCCGTCCCAGGACCCGCAACTGCCCCTCGCCTCCC < 41bp 0.647567933703276 0.91223620946986 0.09351486 0.24960941 prediction 0.529336551533167 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589966 chr5:140589970 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_105770 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr1 166819279 166819279 1 + T C UCEC 166819277 + 166819257 166819297 41 GTGAAGAACTCCATGGAAAGCATGAACACTGACATGGTGAT GTGAAGAACTCCATGGAAAGCACGAACACTGACATGGTGAT < 41bp 0.520791457591897 0.785457766326831 0.07127008 0.10339001 prediction 0.529332617469866 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166819277 chr1:166819279 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_105771 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:166819232-166819288
64251 chrX 68725795 68725795 1 + C G rs141000146 68725794 + 68725774 68725814 41 CTGGACTGTAGCCTGGACACCCTGATGGGGGACCTGCTGGC CTGGACTGTAGCCTGGACACCGTGATGGGGGACCTGCTGGC < 41bp 0.563481436291055 0.828121363777692 0.08353314 0.31649482 prediction 0.529279854973273 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68725794 chrX:68725795 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_105775 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:68725756-68725795
64251 chr16 10841095 10841095 1 + C A THCA 10841091 + 10841071 10841111 41 GTTGGGAAAAGCACATTCAGCGCCCACCTTGCCCATGGCCT GTTGGGAAAAGCACATTCAGCGCCAACCTTGCCCATGGCCT < 41bp 0.338407417094301 0.764639481511608 0.16670617 0.27456355 prediction 0.529278963023216 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10841091 chr16:10841095 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_105776 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:10841088-10841127
64251 chr1 110082551 110082551 1 + T A rs41279738 110082547 + 110082527 110082567 41 CATCAGCTGAGAGGAGCTATCACATGGGAGCCGGGACTGCT CATCAGCTGAGAGGAGCTATCACAAGGGAGCCGGGACTGCT < 41bp 0.540901781382467 0.805511633773924 0.4009999 0.59915376 prediction 0.529219704782913 Functional Gain - GPR61 ENSG00000254942 ncRNA_exonic Human antisense chr1:110082547 chr1:110082551 . . 0 25 hm5C_associated_SNPs_105780 0 1 1 FUS POSTAR2 GSE40653,GSM998875 chr1:110082540-110082560
64251 chr5 50091025 50091025 1 + T C STAD 50091023 + 50091003 50091043 41 CGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTT CGATGTGAGCACAACACAAACTCGAAGCCCCATAAACTGTT < 41bp 0.482252389787038 0.764607841103543 0.042228132 0.4838483 prediction 0.529215682207086 Functional Gain - PARP8 ENSG00000151883 CDS Human protein_coding chr5:50091023 chr5:50091025 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_105781 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:50091011-50091040
64251 chr4 71628266 71628266 1 + T C CESC 71628264 + 71628244 71628284 41 TATCTCATGGCTAATGAACGCATGAACCTCATGAACATGGC TATCTCATGGCTAATGAACGCACGAACCTCATGAACATGGC < 41bp 0.531020671544052 0.795625858149691 0.37815738 0.34098113 prediction 0.529210373211277 Functional Gain - RUFY3 ENSG00000018189 CDS Human protein_coding chr4:71628264 chr4:71628266 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_105783 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:71628261-71628290
64251 chrX 135592353 135592353 1 + C G LUAD 135592349 + 135592329 135592369 41 GTGGCCGTCAAATCACTGCCCAGGCATGGGATGGGACTACA GTGGCCGTCAAATCACTGCCCAGGGATGGGATGGGACTACA < 41bp 0.46976502046312 0.764589598944171 0.14455965 0.5966427 prediction 0.529179197888341 Functional Gain - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135592349 chrX:135592353 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_105786 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chrX:135592339-135592365
64251 chr6 89790771 89790771 1 + C A STAD 89790767 + 89790747 89790787 41 TCCCGGACCCCCGGGCACTGCCCCCGACCCTCTTCCTCCCT TCCCGGACCCCCGGGCACTGCCCCAGACCCTCTTCCTCCCT < 41bp 0.366838351673398 0.764565222790772 0.32726657 0.35241443 prediction 0.529130445581544 Functional Gain - PNRC1 ENSG00000146278 CDS Human protein_coding chr6:89790767 chr6:89790771 nonsynonymous SNV 0.952 2 25 hm5C_associated_SNPs_105788 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:89790760-89790780
64251 chr1 42880516 42880516 1 + T A rs1055055 42880512 + 42880492 42880532 41 CATCAACAGTGGGTCTACCTCTAGTGAAAGTGAGCCTGAAC CATCAACAGTGGGTCTACCTCTAGAGAAAGTGAGCCTGAAC < 41bp 0.584816298627348 0.849373707028948 0.16987628 0.47310692 prediction 0.5291148168032 Functional Gain - RIMKLA ENSG00000177181 CDS Human protein_coding chr1:42880512 chr1:42880516 nonsynonymous SNV 0.899 3 25 hm5C_associated_SNPs_105790 0 1 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:42880496-42880521
64251 chr1 110038772 110038772 1 + T A rs114578308 110038768 + 110038748 110038788 41 ACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGG ACTCAGTATGGTTCCAGGCCCAGAACAAAGGTGCGGCCTGG < 41bp 0.555965794744876 0.820511017030685 0.2537682 0.5083179 prediction 0.529090444571617 Functional Gain - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110038768 chr1:110038772 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_105793 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:110038748-110038772
64251 chr19 33167237 33167237 1 + T A LIHC 33167233 + 33167213 33167253 41 AGACGACTGCGTGCTACCACCACCTGGTGCTGACCGTCGGT AGACGACTGCGTGCTACCACCACCAGGTGCTGACCGTCGGT < 41bp 0.586406639973455 0.850946609165016 0.4328857 0.49783757 prediction 0.529079938383123 Functional Gain - RGS9BP ENSG00000186326 CDS Human protein_coding chr19:33167233 chr19:33167237 nonsynonymous SNV 0.933 1 25 hm5C_associated_SNPs_105794 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:33167228-33167275
64251 chr19 12921196 12921196 1 + T A rs62619782 12921192 + 12921172 12921212 41 GAAACTGCAGGACTTGGATACTGATTATGGCTCAGGCTACC GAAACTGCAGGACTTGGATACTGAATATGGCTCAGGCTACC < 41bp 0.440938105054559 0.76452136905639 0.14840609 0.3870543 prediction 0.529042738112781 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12921192 chr19:12921196 nonsynonymous SNV 0.973 2 25 hm5C_associated_SNPs_105797 1 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12921153-12921212
64251 chr17 61886961 61886961 1 + T C KIRC 61886959 + 61886939 61886979 41 TGAAAAAGAAAGCTACCAATCTTCAAAGAGTCTCTTACCTT TGAAAAAGAAAGCTACCAATCTCCAAAGAGTCTCTTACCTT < 41bp 0.478613715808244 0.764488811355315 0.26108333 0.959252 prediction 0.52897762271063 Functional Gain - DDX42 ENSG00000198231 CDS Human protein_coding chr17:61886959 chr17:61886961 synonymous SNV . 0 23 hm5C_associated_SNPs_105799 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61886925-61886997
64251 chr5 33462080 33462080 1 + T A KIRC 33462076 + 33462056 33462096 41 GCAACCATCCAGCTGGATTTCCAGTTGCCCATCAGATTTAA GCAACCATCCAGCTGGATTTCCAGATGCCCATCAGATTTAA < 41bp 0.430226741156052 0.764487184439878 0.23590633 0.89377695 prediction 0.528974368879756 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33462076 chr5:33462080 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_105800 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr5:33462054-33462081
64251 chr14 29237721 29237721 1 + C A LUAD 29237717 + 29237697 29237737 41 CTGCTCCGTCAACCTGCTCGCGGGCCAGACCAGTTACTTTT CTGCTCCGTCAACCTGCTCGCGGGACAGACCAGTTACTTTT < 41bp 0.641953345344238 0.906422257326841 0.83468455 0.94198817 prediction 0.528937823965206 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237717 chr14:29237721 synonymous SNV . 0 25 hm5C_associated_SNPs_105804 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:29237720-29237740
64251 chr7 92166627 92166627 1 + T A rs6951704 92166623 + 92166603 92166643 41 TTGGTCAGGCTGGTCTCGAACTCCTGACCTTGTGATACACC TTGGTCAGGCTGGTCTCGAACTCCAGACCTTGTGATACACC < 41bp 0.479212126765168 0.764467747780295 0.19882137 0.8974575 prediction 0.52893549556059 Functional Gain - RBM48 ENSG00000127993 UTR3 Human protein_coding chr7:92166623 chr7:92166627 . . 0 25 hm5C_associated_SNPs_105805 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:92166612-92166650
64251 chr22 39078362 39078362 1 + T C COAD 39078360 + 39078340 39078380 41 CTGTCGGAGAGACTATGGGGCCTGACGGAGATGTTTCCGGA CTGTCGGAGAGACTATGGGGCCCGACGGAGATGTTTCCGGA < 41bp 0.505125799319525 0.769591369605911 0.12300384 0.08196348 prediction 0.528931140572774 Functional Gain - TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39078360 chr22:39078362 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105806 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:39078326-39078364
64251 chr16 30012264 30012264 1 + C G rs138024392 30012263 + 30012243 30012283 41 TCTCCAGGAAGAGAAGCCCTCCGCTGGGGGGCGCCCCCTCT TCTCCAGGAAGAGAAGCCCTCGGCTGGGGGGCGCCCCCTCT < 41bp 0.454691916057667 0.764454526563413 0.41069052 0.8942504 prediction 0.528909053126827 Functional Gain - INO80E ENSG00000169592 CDS Human protein_coding chr16:30012263 chr16:30012264 nonsynonymous SNV 0.967 1 22 hm5C_associated_SNPs_105807 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:30012263-30012264
64251 chr4 1389034 1389034 1 + C G rs527798572 1389033 + 1389013 1389053 41 GCCCGCCTGCTCACACGTGCCCATGTGGAGTGCCCGCCTGC GCCCGCCTGCTCACACGTGCCGATGTGGAGTGCCCGCCTGC < 41bp 0.474264406828716 0.764451838882411 0.017947674 0.032889515 prediction 0.528903677764822 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389033 chr4:1389034 synonymous SNV . 0 22 hm5C_associated_SNPs_105810 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr4:1389034-1389035
64251 chr1 236368452 236368452 1 + T C UCEC 236368450 + 236368430 236368470 41 ACCCTGGAATGGTCCCCAGCCATGGATTCAGTCCCAGATCT ACCCTGGAATGGTCCCCAGCCACGGATTCAGTCCCAGATCT < 41bp 0.516565241772716 0.781015674799602 0.17713737 0.15227231 prediction 0.528900866053773 Functional Gain - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236368450 chr1:236368452 synonymous SNV . 0 23 hm5C_associated_SNPs_105811 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:236368437-236368466
64251 chr22 29688151 29688151 1 + T G COAD 29688149 + 29688129 29688169 41 CCATGGATGAAGGACCAGATCTTGATCTAGGTAATTTTGAA CCATGGATGAAGGACCAGATCTGGATCTAGGTAATTTTGAA < 41bp 0.451720245824195 0.76442338448965 0.18211159 0.26798028 prediction 0.5288467689793 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29688149 chr22:29688151 synonymous SNV . 0 23 hm5C_associated_SNPs_105814 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:29688100-29688156
64251 chr3 52444872 52444872 1 + C G rs566829817 52444871 + 52444851 52444891 41 CCCGGCCCTGCACTGGCCGCCCGGCAGGCGCGACATGAGCC CCCGGCCCTGCACTGGCCGCCGGGCAGGCGCGACATGAGCC < 41bp 0.466459453790507 0.764412012844165 0.13262671 0.7821351 prediction 0.528824025688331 Functional Gain - PHF7 ENSG00000010318 UTR5 Human protein_coding chr3:52444871 chr3:52444872 . . 0 22 hm5C_associated_SNPs_105817 0 0 1 DDX3X POSTAR2 ENCODE chr3:52444860-52444919
64251 chr2 73452826 73452826 1 + T C STAD 73452824 + 73452804 73452844 41 CGCCACAGCCGCCACAAGATCCTCAGGTGCCAGCTGGGGAC CGCCACAGCCGCCACAAGATCCCCAGGTGCCAGCTGGGGAC < 41bp 0.486739049963533 0.764392896234256 0.10493052 0.21246082 prediction 0.528785792468512 Functional Gain - SMYD5 ENSG00000135632 CDS Human protein_coding chr2:73452824 chr2:73452826 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_105819 0 0 2 PPIG POSTAR2 ENCODE chr2:73452775-73452827
64251 chr1 45793415 45793415 1 + C A STAD 45793411 + 45793391 45793431 41 CTGAGCCCAGGTGAGGATCCCGAGCTGGGCCTCGAAATGAC CTGAGCCCAGGTGAGGATCCCGAGATGGGCCTCGAAATGAC < 41bp 0.64111268938169 0.905477971526537 0.8234277 0.90610325 prediction 0.528730564289694 Functional Gain - HPDL ENSG00000186603 CDS Human protein_coding chr1:45793411 chr1:45793415 nonsynonymous SNV 0.945 0 25 hm5C_associated_SNPs_105825 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:45793384-45793422
64251 chr2 98349621 98349621 1 + C G LGG 98349617 + 98349597 98349637 41 TATCTGAAGCTGAAGGCGGACGGGCTCATCTACTGCCTGAA TATCTGAAGCTGAAGGCGGACGGGGTCATCTACTGCCTGAA < 41bp 0.547268205244102 0.811631942565886 0.8546208 0.9086462 prediction 0.528727474643569 Functional Gain - ZAP70 ENSG00000115085 CDS Human protein_coding chr2:98349617 chr2:98349621 nonsynonymous SNV 0.911 4 25 hm5C_associated_SNPs_105826 0 0 1 TBRG4 POSTAR2 ENCODE chr2:98349613-98349654
64251 chr10 115657951 115657951 1 + C G OV 115657947 + 115657927 115657967 41 ATGGGCACTCCTGCTGGACTCTGGCAAACTGCCAAAGAAAA ATGGGCACTCCTGCTGGACTCTGGGAAACTGCCAAAGAAAA < 41bp 0.490526617288794 0.764363538680856 0.07086137 0.23353514 prediction 0.528727077361711 Functional Gain - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115657947 chr10:115657951 synonymous SNV . 0 25 hm5C_associated_SNPs_105827 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:115657896-115657953
64251 chr12 7031945 7031945 1 + T C UCEC 7031943 + 7031923 7031963 41 GCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGA GCTTTGCCGGACATAACTTCCGCAATCCCAGTGTGCTGTGA < 41bp 0.506012120647015 0.770371808011658 0.45634666 0.30449823 prediction 0.528719374729287 Functional Gain - ENO2 ENSG00000111674 CDS Human protein_coding chr12:7031943 chr12:7031945 synonymous SNV . 0 23 hm5C_associated_SNPs_105828 0 0 7 LIN28B POSTAR2 GSE44616,GSM1087851 chr12:7031919-7031951
64251 chr5 150175100 150175100 1 + T C LIHC 150175098 + 150175078 150175118 41 ATCATCCTGGCCACCATTGTCATCATGACCTCGTTGTTGCT ATCATCCTGGCCACCATTGTCACCATGACCTCGTTGTTGCT < 41bp 0.489969476914535 0.764323321572183 0.043800324 0.12045914 prediction 0.528646643144365 Functional Gain - SMIM3 ENSG00000256235 CDS Human protein_coding chr5:150175098 chr5:150175100 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_105831 0 0 2 DDX3X POSTAR2 ENCODE chr5:150175097-150175114
64251 chr9 131271255 131271255 1 + C G ACC 131271251 + 131271231 131271271 41 ATATGCAGGAGAACCAACCTCTGTCTGAGACTTCGCCATCC ATATGCAGGAGAACCAACCTCTGTGTGAGACTTCGCCATCC < 41bp 0.469656154768443 0.764308996085315 0.32229975 0.41114902 prediction 0.52861799217063 Functional Gain - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131271251 chr9:131271255 nonsynonymous SNV 0.058 1 25 hm5C_associated_SNPs_105835 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131271244-131271276
64251 chr3 45637439 45637439 1 + T A rs267236 45637435 + 45637415 45637455 41 TGCCCCGTCATCCTCGCCAGCTGGTCTGGACGGTTCACAGC TGCCCCGTCATCCTCGCCAGCTGGACTGGACGGTTCACAGC < 41bp 0.588429288858652 0.85273341088292 0.21021268 0.53176373 prediction 0.528608244048537 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637435 chr3:45637439 synonymous SNV . 0 25 hm5C_associated_SNPs_105839 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:45637380-45637460
64251 chr6 111587184 111587184 1 + C A HNSC 111587180 + 111587160 111587200 41 GTGCCTTTTTGGCTCCACTGCTAGCTAAACTGGCTTTGGGT GTGCCTTTTTGGCTCCACTGCTAGATAAACTGGCTTTGGGT < 41bp 0.361130061666326 0.764300603743796 0.50689214 0.4706436 prediction 0.528601207487593 Functional Gain - MFSD4B ENSG00000173214 CDS Human protein_coding chr6:111587180 chr6:111587184 nonsynonymous SNV 0.408 4 25 hm5C_associated_SNPs_105840 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:111587146-111587184
64251 chr16 56966192 56966192 1 + C G CESC 56966188 + 56966168 56966208 41 GACCGAACCCGAGCCCGTCACGCTCCTGGTGAAGAGCCCCA GACCGAACCCGAGCCCGTCACGCTGCTGGTGAAGAGCCCCA < 41bp 0.515590001257027 0.779890282097351 0.23820964 0.30578104 prediction 0.528600561680649 Functional Gain - HERPUD1 ENSG00000051108 CDS Human protein_coding chr16:56966188 chr16:56966192 synonymous SNV . 0 25 hm5C_associated_SNPs_105841 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:56966156-56966193
64251 chr17 34070252 34070252 1 + C A rs73990295 34070248 + 34070228 34070268 41 TGAAGGATGGCAGCATCTCACATGCCCCATCACCAACTCTG TGAAGGATGGCAGCATCTCACATGACCCATCACCAACTCTG < 41bp 0.442800488942999 0.764272248447938 0.36350298 0.37284964 prediction 0.528544496895875 Functional Gain - RASL10B ENSG00000141150 UTR3 Human other chr17:34070248 chr17:34070252 . . 0 25 hm5C_associated_SNPs_105848 0 0 4 FUS POSTAR2 SRX029328 chr17:34070240-34070270
64251 chr12 107712246 107712246 1 + C G rs547139410 107712242 + 107712222 107712262 41 TGCTGCGCTCCGGTGCAGGGCAGGCTGGCGCCGAGCGAACC TGCTGCGCTCCGGTGCAGGGCAGGGTGGCGCCGAGCGAACC < 41bp 0.493429431398368 0.764258798570748 0.7960012 0.89536095 prediction 0.528517597141496 Functional Gain - BTBD11 ENSG00000151136 UTR5 Human protein_coding chr12:107712242 chr12:107712246 . . 0 25 hm5C_associated_SNPs_105849 0 0 2 DDX3X POSTAR2 ENCODE chr12:107712235-107712289
64251 chr4 71066250 71066250 1 + T G OV 71066248 + 71066228 71066268 41 TCCAGTTTACATGGTCCTACCCTGGGAACAACCTCAGCAAA TCCAGTTTACATGGTCCTACCCGGGGAACAACCTCAGCAAA < 41bp 0.4204835527757 0.764239859180366 0.14021629 0.925274 prediction 0.528479718360732 Functional Gain - ODAM ENSG00000109205 CDS Human protein_coding chr4:71066248 chr4:71066250 nonsynonymous SNV 0.985 2 23 hm5C_associated_SNPs_105850 0 0 4 GRWD1 POSTAR2 ENCODE chr4:71066215-71066311
64251 chr2 32891790 32891790 1 + T A UCEC 32891786 + 32891766 32891806 41 AAGGGAAGGGGATGTCCTTTCAAATTGTGAATTCACTCCAG AAGGGAAGGGGATGTCCTTTCAAAATGTGAATTCACTCCAG < 41bp 0.580108618292434 0.844324002363044 0.38068935 0.47001815 prediction 0.528430768141219 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32891786 chr2:32891790 nonsynonymous SNV 0.655 0 25 hm5C_associated_SNPs_105851 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr2:32891788-32891809
64251 chr17 1675210 1675210 1 + T C HNSC 1675208 + 1675188 1675228 41 TGTGGCACCTCTGGAAAAGTCATATGGGACCAGGCCCAGAG TGTGGCACCTCTGGAAAAGTCACATGGGACCAGGCCCAGAG < 41bp 0.502497203587321 0.766638913288779 0.23028195 0.24208137 prediction 0.528283419402916 Functional Gain - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1675208 chr17:1675210 nonsynonymous SNV 0.825 5 23 hm5C_associated_SNPs_105854 0 0 6 NOL12 POSTAR2 ENCODE chr17:1675194-1675251
64251 chr1 226026489 226026489 1 + C G PCPG 226026488 + 226026468 226026508 41 ATCATCCCACTCCTGACTGACCCCAAGAACCATGGCCTGAG ATCATCCCACTCCTGACTGACGCCAAGAACCATGGCCTGAG < 41bp 0.44310903572734 0.764128014892019 0.031326205 0.18392575 prediction 0.528256029784038 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226026488 chr1:226026489 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_105855 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:226026470-226026502
64251 chr20 21312419 21312419 1 + T C UCEC 21312417 + 21312397 21312437 41 CTTGTTTAGCCCAGCCTAACCATGACCCAAATACTCATCAT CTTGTTTAGCCCAGCCTAACCACGACCCAAATACTCATCAT < 41bp 0.494324193679538 0.764123268551391 0.09182575 0.11150196 prediction 0.528246537102781 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21312417 chr20:21312419 synonymous SNV . 0 23 hm5C_associated_SNPs_105856 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr20:21312400-21312420
64251 chr16 28592408 28592408 1 + C G LUSC 28592404 + 28592384 28592424 41 GTAGACAATGGCCCTCGTGTCTGCCGATTCCCGCATTGCAG GTAGACAATGGCCCTCGTGTCTGCGGATTCCCGCATTGCAG < 41bp 0.483029909426518 0.764123136831411 0.20835835 0.22806859 prediction 0.528246273662822 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28592404 chr16:28592408 synonymous SNV . 0 25 hm5C_associated_SNPs_105857 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:28592408-28592445
64251 chr15 91503669 91503669 1 + C A SKCM 91503665 + 91503645 91503685 41 CCTTCCCGGCATTACTGGATCTCCCCATGGGCTCAGATGCA CCTTCCCGGCATTACTGGATCTCCACATGGGCTCAGATGCA < 41bp 0.321280447031091 0.764122316192715 0.035774678 0.9450819 prediction 0.528244632385429 Functional Gain - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91503665 chr15:91503669 nonsynonymous SNV 0.820 3 25 hm5C_associated_SNPs_105858 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:91503658-91503676
64251 chr2 241513949 241513949 1 + C A UCEC 241513945 + 241513925 241513965 41 CATCCAGGTGCTGCCTTCACCTGCCTGGAGACTGCCTTCCG CATCCAGGTGCTGCCTTCACCTGCATGGAGACTGCCTTCCG < 41bp 0.657805270479278 0.9219151855419 0.43563402 0.6395654 prediction 0.528219830125244 Functional Gain - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241513945 chr2:241513949 nonsynonymous SNV 0.985 4 25 hm5C_associated_SNPs_105860 0 0 2 FMR1 POSTAR2 ENCODE chr2:241513931-241514006
64251 chr2 217498169 217498169 1 + C A rs528830011 217498165 + 217498145 217498185 41 GGAAGAAGCGGAGGAGGCGGCTCCCGCGCTCGCAGGGCCGT GGAAGAAGCGGAGGAGGCGGCTCCAGCGCTCGCAGGGCCGT < 41bp 0.624041234655393 0.888139048811207 0.46784526 0.8918741 prediction 0.528195628311628 Functional Gain - IGFBP2 ENSG00000115457 UTR5 Human protein_coding chr2:217498165 chr2:217498169 . . 0 25 hm5C_associated_SNPs_105862 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:217498140-217498180
64251 chr12 64825398 64825398 1 + C A PRAD 64825394 + 64825374 64825414 41 AAGTTTATCTGGACTGTTTACAGACATTCTTGCCAGCCCTC AAGTTTATCTGGACTGTTTACAGAAATTCTTGCCAGCCCTC < 41bp 0.360917072871844 0.764091103100579 0.5122695 0.4178269 prediction 0.528182206201158 Functional Gain - XPOT ENSG00000184575 CDS Human protein_coding chr12:64825394 chr12:64825398 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_105864 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:64825311-64825398
64251 chr21 45094963 45094963 1 + T C UCEC 45094961 + 45094941 45094981 41 TGATGAAGGAGGTCCTGTGTCCTGAGAGTCAGTCTCCTAAT TGATGAAGGAGGTCCTGTGTCCCGAGAGTCAGTCTCCTAAT < 41bp 0.527785465419799 0.79187555756426 0.22412938 0.25688243 prediction 0.52818018428892 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45094961 chr21:45094963 synonymous SNV . 0 23 hm5C_associated_SNPs_105865 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr21:45094919-45094980
64251 chr13 49854797 49854797 1 + T C COAD 49854795 + 49854775 49854815 41 AAGAAGGCAGACATCTCTTACATGAGGTTCGGGGAGCTTGA AAGAAGGCAGACATCTCTTACACGAGGTTCGGGGAGCTTGA < 41bp 0.5094992489426 0.773588783144715 0.7142871 0.7583307 prediction 0.52817906840423 Functional Gain - CDADC1 ENSG00000102543 CDS Human protein_coding chr13:49854795 chr13:49854797 nonsynonymous SNV 0.994 2 23 hm5C_associated_SNPs_105866 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr13:49854796-49854823
64251 chr5 150843128 150843128 1 + T C UCEC 150843126 + 150843106 150843146 41 CACTTCAGATGGTTCCAGACCTTGATCCACCTGTTAAAAGG CACTTCAGATGGTTCCAGACCTCGATCCACCTGTTAAAAGG < 41bp 0.468587282747897 0.764058131493659 0.11811054 0.643774 prediction 0.528116262987319 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150843126 chr5:150843128 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105868 0 0 1 DDX24 POSTAR2 ENCODE chr5:150843113-150843216
64251 chr3 47378198 47378198 1 + C T SKCM 47378197 + 47378177 47378217 41 AGCACTGTGGAGGCCTACAACCCGGAGACAGACACATGGAC AGCACTGTGGAGGCCTACAACTCGGAGACAGACACATGGAC < 41bp 0.501200640858664 0.765224172608584 0.41567558 0.7432828 prediction 0.528047063499839 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47378197 chr3:47378198 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_105872 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:47378192-47378231
64251 chr1 228353822 228353822 1 + T G DLBC 228353820 + 228353800 228353840 41 GGCTACGCCCACTTCCTGAACGTGCAGGGCCGGACGCTCTA GGCTACGCCCACTTCCTGAACGGGCAGGGCCGGACGCTCTA < 41bp 0.414751730355017 0.764011633471724 0.23031649 0.7245055 prediction 0.528023266943447 Functional Gain - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228353820 chr1:228353822 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_105873 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:228353813-228353839
64251 chr14 24624527 24624527 1 + C A UCEC 24624523 + 24624503 24624543 41 ACAGTTGCTCAGCTACTTCTCTACCCTTGACATCCAGGTAC ACAGTTGCTCAGCTACTTCTCTACACTTGACATCCAGGTAC < 41bp 0.339352251580385 0.764005371708405 0.21449298 0.18133679 prediction 0.528010743416809 Functional Gain - RNF31 ENSG00000092098;ENSG00000259529 CDS Human other chr14:24624523 chr14:24624527 synonymous SNV . 0 25 hm5C_associated_SNPs_105875 0 0 6 BUD13 POSTAR2 ENCODE chr14:24624488-24624539
64251 chr20 17950744 17950744 1 + C G rs150656271 17950743 + 17950723 17950763 41 AAGATGCTTTGCTCTGTGGACCCGTGAGCAAGCATAAGCTG AAGATGCTTTGCTCTGTGGACGCGTGAGCAAGCATAAGCTG < 41bp 0.571965343355701 0.835957307054396 0.100393206 0.40272552 prediction 0.527983927397391 Functional Gain - MGME1 ENSG00000125871 CDS Human protein_coding chr20:17950743 chr20:17950744 nonsynonymous SNV 0.110 2 22 hm5C_associated_SNPs_105876 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:17950720-17950760
64251 chr3 5229423 5229423 1 + C A rs191393999 5229419 + 5229399 5229439 41 AAGCGAGCCGGGCTACGGGGCGAGCGCGGGGTGCGGTGGTC AAGCGAGCCGGGCTACGGGGCGAGAGCGGGGTGCGGTGGTC < 41bp 0.591917993543462 0.855905485170543 0.90685916 0.9205245 prediction 0.527974983254161 Functional Gain - EDEM1 ENSG00000268509 CDS Human antisense chr3:5229419 chr3:5229423 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_105878 0 0 8 DDX3X POSTAR2 ENCODE chr3:5229407-5229471
64251 chr12 110924406 110924406 1 + T G rs146589900 110924403 + 110924383 110924423 41 CAGAAACAGCATTACCCTTGCACTACATGGCGACATCAACT CAGAAACAGCATTACCCTTGCACGACATGGCGACATCAACT < 41bp 0.381715433095086 0.763953242796532 0.37783125 0.11582336 prediction 0.527906485593064 Functional Gain - FAM216A ENSG00000204856 CDS Human protein_coding chr12:110924403 chr12:110924406 synonymous SNV . 0 24 hm5C_associated_SNPs_105880 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:110924391-110924423
64251 chr3 124464257 124464257 1 + C A rs2242249 124464253 + 124464233 124464273 41 GACAGAATCTCACTGTCGCCCAGGCTGGAGTTCAGTGGCAC GACAGAATCTCACTGTCGCCCAGGATGGAGTTCAGTGGCAC < 41bp 0.401676691395081 0.763940929221712 0.7409935 0.8419659 prediction 0.527881858443425 Functional Gain - UMPS ENSG00000114491 downstream Human protein_coding chr3:124464253 chr3:124464257 . . 0 25 hm5C_associated_SNPs_105882 1 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:124464238-124464316
64251 chr7 148427226 148427226 1 + C G LUAD 148427225 + 148427205 148427245 41 ATCCCTCACAATGTCGTCAACCCGGAGCCAGAACCCCCACG ATCCCTCACAATGTCGTCAACGCGGAGCCAGAACCCCCACG < 41bp 0.587613230807211 0.85151931675275 0.33785903 0.5856981 prediction 0.52781217189108 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148427225 chr7:148427226 synonymous SNV . 0 22 hm5C_associated_SNPs_105886 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:148427087-148427303
64251 chr3 128623263 128623263 1 + T C LUAD 128623261 + 128623241 128623281 41 CTGATGGCTCAGAAGGCTTACGTCATGGAGAGTATGACCTA CTGATGGCTCAGAAGGCTTACGCCATGGAGAGTATGACCTA < 41bp 0.55108288754059 0.814988047331662 0.022086263 0.0131106675 prediction 0.527810319582145 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128623261 chr3:128623263 nonsynonymous SNV 0.924 1 23 hm5C_associated_SNPs_105887 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128623226-128623264
64251 chr4 170634350 170634350 1 + T C STAD 170634348 + 170634328 170634368 41 AAGCTTCGAAGCATTCTTGACATGAGCCCTTTTACAGTGAC AAGCTTCGAAGCATTCTTGACACGAGCCCTTTTACAGTGAC < 41bp 0.475660915669641 0.763873869902944 0.14335313 0.117841065 prediction 0.527747739805889 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170634348 chr4:170634350 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_105892 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:170634336-170634374
64251 chr9 35752830 35752830 1 + T A KIRC 35752826 + 35752806 35752846 41 CCTACTAGCCCCACCCTGGCCTCATATGCTGCCCCAGGCCC CCTACTAGCCCCACCCTGGCCTCAAATGCTGCCCCAGGCCC < 41bp 0.439397692434634 0.763820677464123 0.04417503 0.22641933 prediction 0.527641354928245 Functional Gain - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35752826 chr9:35752830 nonsynonymous SNV 0.978 1 25 hm5C_associated_SNPs_105895 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:35752805-35752835
64251 chr13 45589616 45589616 1 + C G rs151309735 45589615 + 45589595 45589635 41 CATGGATGACTGAACTTCCTCCAGAAATGAAAGACTTTGGT CATGGATGACTGAACTTCCTCGAGAAATGAAAGACTTTGGT < 41bp 0.552507557259999 0.816295527536065 0.040456444 0.4679585 prediction 0.527575940552132 Functional Gain - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45589615 chr13:45589616 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_105900 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr13:45589581-45589616
64251 chr1 26604071 26604071 1 + T G rs11579354 26604069 + 26604049 26604089 41 TGTTCCCAGCCCTAGGCTGACATGAGAGACGAACAGGCTGT TGTTCCCAGCCCTAGGCTGACAGGAGAGACGAACAGGCTGT < 41bp 0.597175729180218 0.860962633076458 0.24162188 0.90326965 prediction 0.527573807792479 Functional Gain - CEP85 ENSG00000130695 UTR3 Human protein_coding chr1:26604069 chr1:26604071 . . 0 23 hm5C_associated_SNPs_105901 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:26604046-26604085
64251 chr11 66136939 66136939 1 - G T SARC 66136943 - 66136923 66136963 41 CCAGGATCCTGAGCACCAACCACACGGGTCCCGAGGATGCC CCAGGATCCTGAGCACCAACCACAAGGGTCCCGAGGATGCC < 41bp 0.345023317282961 0.763749110965105 0.27137434 0.30849874 prediction 0.527498221930211 Functional Gain - SLC29A2 ENSG00000174669 CDS Human protein_coding chr11:66136943 chr11:66136939 nonsynonymous SNV 0.584 0 25 hm5C_associated_SNPs_105904 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:66136909-66136950
64251 chr4 122737590 122737590 1 + C G BRCA 122737589 + 122737569 122737609 41 TTTTGGAACCAGACAAGAATCCAAAGAAAATAAGGTAACAA TTTTGGAACCAGACAAGAATCGAAAGAAAATAAGGTAACAA < 41bp 0.484393150501878 0.763747852162775 0.36267498 0.8543769 prediction 0.52749570432555 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122737589 chr4:122737590 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_105905 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:122737542-122737590
64251 chr6 41753151 41753151 1 + C G GBM 41753147 + 41753127 41753167 41 GGGAACAGCGCTGCTGGCACCAGCCTTGCTTTGCCTGCCAG GGGAACAGCGCTGCTGGCACCAGCGTTGCTTTGCCTGCCAG < 41bp 0.556949766580494 0.820690755216067 0.3646472 0.8659872 prediction 0.527481977271146 Functional Gain - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41753147 chr6:41753151 nonsynonymous SNV 0.686 1 25 hm5C_associated_SNPs_105908 0 0 6 BUD13 POSTAR2 ENCODE chr6:41753092-41753154
64251 chr22 50639636 50639636 1 + C G rs6010201 50639635 + 50639615 50639655 41 CGACAACCGCGCCCTGCGCGCCCTGCCCGTGGAGGCGCCGC CGACAACCGCGCCCTGCGCGCGCTGCCCGTGGAGGCGCCGC < 41bp 0.474268874704147 0.763721006481661 0.044783503 0.39320275 prediction 0.527442012963321 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50639635 chr22:50639636 unknown . 0 22 hm5C_associated_SNPs_105910 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50639621-50639662
64251 chr1 78280876 78280876 1 + C A COAD 78280872 + 78280852 78280892 41 TCTCCAAGAGGAGTTTGAAGCTACCCTTGGGGCATCTGATC TCTCCAAGAGGAGTTTGAAGCTACACTTGGGGCATCTGATC < 41bp 0.354406020212495 0.763694693734448 0.021249712 0.024710357 prediction 0.527389387468896 Functional Gain - MIGA1 ENSG00000180488 CDS Human protein_coding chr1:78280872 chr1:78280876 synonymous SNV . 0 25 hm5C_associated_SNPs_105912 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:78280864-78280893
64251 chr2 224824695 224824695 1 + T C rs35331337 224824693 + 224824673 224824713 41 CCCTGTTACAGAGCAGTGGACCTGAGAGGACTGCACTTTTC CCCTGTTACAGAGCAGTGGACCCGAGAGGACTGCACTTTTC < 41bp 0.505520055350335 0.76918830700946 0.58910143 0.52358276 prediction 0.52733650331825 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824693 chr2:224824695 synonymous SNV . 0 23 hm5C_associated_SNPs_105915 1 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:224824661-224824704
64251 chr14 93282672 93282672 1 + T C STAD 93282670 + 93282650 93282690 41 GATAGCAGCACTGCCAGTAGCATGGAGCTGGAAGAACTTCG GATAGCAGCACTGCCAGTAGCACGGAGCTGGAAGAACTTCG < 41bp 0.516374994376561 0.780034178951488 0.77512676 0.62463033 prediction 0.527318369149855 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93282670 chr14:93282672 nonsynonymous SNV 0.779 1 23 hm5C_associated_SNPs_105917 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:93282667-93282693
64251 chr4 90034311 90034311 1 + C A BLCA 90034307 + 90034287 90034327 41 CTATGCAAACAGTTCAGATCCTACCAGTGGAGTATCCAAAC CTATGCAAACAGTTCAGATCCTACAAGTGGAGTATCCAAAC < 41bp 0.359873361906207 0.76364683919465 0.019213796 0.52514684 prediction 0.5272936783893 Functional Gain - TIGD2 ENSG00000180346 CDS Human protein_coding chr4:90034307 chr4:90034311 synonymous SNV . 0 25 hm5C_associated_SNPs_105921 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr4:90034292-90034347
64251 chr19 47858603 47858603 1 + T G rs542850010 47858601 + 47858581 47858621 41 GTGCCTGGGAGGCTGTTCCCCATCACGGTGAGTACTTCCCC GTGCCTGGGAGGCTGTTCCCCAGCACGGTGAGTACTTCCCC < 41bp 0.414931305471598 0.763624978707385 0.15406588 0.20969635 prediction 0.527249957414769 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47858601 chr19:47858603 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_105924 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:47858583-47858607
64251 chr11 18362844 18362844 1 + T C COAD 18362842 + 18362822 18362862 41 GCAGAAAATGTTCCCCACAACATGACAGAGAAGGAATTCTG GCAGAAAATGTTCCCCACAACACGACAGAGAAGGAATTCTG < 41bp 0.531992025164645 0.795590203874131 0.034637034 0.05520922 prediction 0.527196357418972 Functional Gain - GTF2H1 ENSG00000110768 CDS Human protein_coding chr11:18362842 chr11:18362844 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_105929 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:18362819-18362852
64251 chr6 26252226 26252226 1 + T G BRCA 26252223 + 26252203 26252243 41 AAGCACGCCGTGTCCGAGGGCACTAAGGCCGTCACCAAGTA AAGCACGCCGTGTCCGAGGGCACGAAGGCCGTCACCAAGTA < 41bp 0.626508536992084 0.890097344121924 0.52282745 0.53885984 prediction 0.52717761425968 Functional Gain - HIST1H2BH ENSG00000197459 CDS Human other chr6:26252223 chr6:26252226 synonymous SNV . 0 24 hm5C_associated_SNPs_105930 0 0 4 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr6:26252214-26252235
64251 chr1 11345737 11345737 1 + T C PRAD 11345735 + 11345715 11345755 41 TACGTGGCTCTGGGAGACCTCATCATCCTCATCACTTTTGG TACGTGGCTCTGGGAGACCTCACCATCCTCATCACTTTTGG < 41bp 0.516572621840038 0.780149830154342 0.089080274 0.15682769 prediction 0.527154416628608 Functional Gain - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11345735 chr1:11345737 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_105936 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:11345711-11345738
64251 chr9 140135797 140135797 1 + C A rs556036177 140135793 + 140135773 140135813 41 GTCTACTTCCTCCTGCTTCCCCGCCGCCGCCGCCGCCATCA GTCTACTTCCTCCTGCTTCCCCGCAGCCGCCGCCGCCATCA < 41bp 0.411691195174464 0.763567468116158 0.123748094 0.18926468 prediction 0.527134936232316 Functional Gain - TUBB4B ENSG00000188229 UTR5 Human protein_coding chr9:140135793 chr9:140135797 . . 0 25 hm5C_associated_SNPs_105938 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140135740-140135800
64251 chr13 31205414 31205414 1 + C A BRCA 31205410 + 31205390 31205430 41 GCAAATGTACATCATTTCCCCAGGCTTTATGTGTCCAGTGG GCAAATGTACATCATTTCCCCAGGATTTATGTGTCCAGTGG < 41bp 0.377328624014187 0.763549017153149 0.34441954 0.34634498 prediction 0.527098034306298 Functional Gain - USPL1 ENSG00000132952 CDS Human protein_coding chr13:31205410 chr13:31205414 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_105940 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr13:31205400-31205420
64251 chr2 235950322 235950322 1 + T C UCEC 235950320 + 235950300 235950340 41 CTTGCCACGACCTGGACTTGCTTGGCCAAAGCCCTGGTTGG CTTGCCACGACCTGGACTTGCTCGGCCAAAGCCCTGGTTGG < 41bp 0.503756723278322 0.767296823476189 0.38993993 0.41362292 prediction 0.527080200395736 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950320 chr2:235950322 synonymous SNV . 0 23 hm5C_associated_SNPs_105942 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:235950308-235950323
64251 chr7 193291 193291 1 + C A UCEC 193287 + 193267 193307 41 TGCACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGC TGCACATCGCCCTGGACCTGCTGCACAGGCTGGAGCGACGC < 41bp 0.360753915862342 0.76352387674746 0.36870682 0.42460313 prediction 0.527047753494921 Functional Gain - FAM20C ENSG00000177706 CDS Human protein_coding chr7:193287 chr7:193291 nonsynonymous SNV 0.326 3 25 hm5C_associated_SNPs_105943 0 0 3 DDX3X POSTAR2 ENCODE chr7:193229-193317
64251 chr11 71498591 71498591 1 + C A rs12270466 71498587 + 71498567 71498607 41 AGGCCCCGCCCCCGTCATGGCGCCCGAGGAGAACGCGGGGA AGGCCCCGCCCCCGTCATGGCGCCAGAGGAGAACGCGGGGA < 41bp 0.643740432223493 0.907253875145331 0.24733192 0.39479294 prediction 0.527026885843677 Functional Gain - FAM86C1 ENSG00000158483 CDS Human protein_coding chr11:71498587 chr11:71498591 synonymous SNV . 0 25 hm5C_associated_SNPs_105946 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:71498591-71498592
64251 chr2 219301940 219301940 1 + C A BRCA 219301936 + 219301916 219301956 41 TACCTCAAGACCCATCCCAGCGGGCGTGACCCTGAGACCCC TACCTCAAGACCCATCCCAGCGGGAGTGACCCTGAGACCCC < 41bp 0.654324521045179 0.917837746344045 0.8783414 0.8898562 prediction 0.527026450597733 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219301936 chr2:219301940 nonsynonymous SNV 0.020 4 25 hm5C_associated_SNPs_105947 0 0 5 GRWD1 POSTAR2 ENCODE chr2:219301915-219301970
64251 chr17 7317995 7317995 1 + C G rs567010279 7317994 + 7317974 7318014 41 ACTCCCAGGTTTTCTCAGCACCGGGGACCAGGCTGCAAAAG ACTCCCAGGTTTTCTCAGCACGGGGGACCAGGCTGCAAAAG < 41bp 0.589921481345055 0.853430043060676 0.21432775 0.77207625 prediction 0.527017123431242 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7317994 chr17:7317995 synonymous SNV . 0 22 hm5C_associated_SNPs_105949 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1486177 chr17:7317980-7318000
64251 chr11 94861790 94861790 1 + C G rs202118309 94861789 + 94861769 94861809 41 AATCTCCACAGCCTAATGGACCGGGCTTTGACCCCACAGTG AATCTCCACAGCCTAATGGACGGGGCTTTGACCCCACAGTG < 41bp 0.579889048218567 0.843366613657218 0.7923743 0.91456735 prediction 0.526955130877302 Functional Gain - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94861789 chr11:94861790 nonsynonymous SNV 0.022 0 22 hm5C_associated_SNPs_105955 0 0 2 YBX3 POSTAR2 ENCODE chr11:94861753-94861824
64251 chr20 4680118 4680118 1 + T C rs62637686 4680116 + 4680096 4680136 41 ATGGTGGTGGCTGGGGACAGCCTCATGGTGGTGGCTGGGGT ATGGTGGTGGCTGGGGACAGCCCCATGGTGGTGGCTGGGGT < 41bp 0.496695971338244 0.763437848261705 0.17577133 0.24634749 prediction 0.526875696523411 Functional Gain - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680116 chr20:4680118 synonymous SNV . 0 23 hm5C_associated_SNPs_105957 1 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:4680111-4680140
64251 chrX 12735195 12735195 1 + C A LGG 12735191 + 12735171 12735211 41 CTGGATAATGCCGTCGTCTCCACGCTGGGAGCTCTAGAGGC CTGGATAATGCCGTCGTCTCCACGATGGGAGCTCTAGAGGC < 41bp 0.399821411585642 0.763423114372845 0.8676912 0.5824135 prediction 0.526846228745689 Functional Gain - FRMPD4 ENSG00000169933 CDS Human protein_coding chrX:12735191 chrX:12735195 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_105962 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chrX:12735177-12735199
64251 chr19 17875233 17875233 1 + C G rs145154295 17875229 + 17875209 17875249 41 AAGGCGATGGCGAAACTCTCCAAGCTGGCCAGCAACGGGAC AAGGCGATGGCGAAACTCTCCAAGGTGGCCAGCAACGGGAC < 41bp 0.548139870802683 0.811532502171239 0.37643588 0.86531824 prediction 0.526785262737113 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17875229 chr19:17875233 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_105965 0 0 2 DDX24 POSTAR2 ENCODE chr19:17875183-17875244
64251 chr6 160221773 160221773 1 + C G SKCM 160221772 + 160221752 160221792 41 GTGCTGGCGATGTTCTGCACCCGAGGACTGCTATTTTTTGC GTGCTGGCGATGTTCTGCACCGGAGGACTGCTATTTTTTGC < 41bp 0.450516387859965 0.763370291659401 0.33077526 0.82465196 prediction 0.526740583318803 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160221772 chr6:160221773 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_105967 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:160221741-160221783
64251 chr7 99661799 99661799 1 + C A GBM 99661795 + 99661775 99661815 41 CCTCACCCTCCACTACAGAACACACTTGGTGGACCGGCCCT CCTCACCCTCCACTACAGAACACAATTGGTGGACCGGCCCT < 41bp 0.359408984191013 0.763368996459964 0.07997203 0.10956004 prediction 0.526737992919928 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99661795 chr7:99661799 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_105968 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:99661768-99661802
64251 chr17 30781528 30781528 1 + T C STAD 30781526 + 30781506 30781546 41 CCTACAGAGCTTGGAGGACTCCTGAAGTATGTACGACCCTT CCTACAGAGCTTGGAGGACTCCCGAAGTATGTACGACCCTT < 41bp 0.526824111448971 0.790125119042577 0.62878454 0.58197784 prediction 0.526602015187212 Functional Gain - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30781526 chr17:30781528 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_105976 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30781509-30781575
64251 chr3 44700505 44700505 1 + T A COAD 44700501 + 44700481 44700521 41 CTGTTAAAAATCCAAAAACCCAGCTTGGACAAAAGCCTTTT CTGTTAAAAATCCAAAAACCCAGCATGGACAAAAGCCTTTT < 41bp 0.447623655562255 0.763291078525908 0.2422202 0.19249535 prediction 0.526582157051816 Functional Gain - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700501 chr3:44700505 nonsynonymous SNV 0.778 1 25 hm5C_associated_SNPs_105978 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:44700483-44700514
64251 chr1 154960749 154960749 1 + C T SKCM 154960748 + 154960728 154960768 41 CTCACAGCAGGGGGCATCGGCCCCACTCATGATGATGTGAC CTCACAGCAGGGGGCATCGGCTCCACTCATGATGATGTGAC < 41bp 0.505314014523875 0.768535226902582 0.03499213 0.478466 prediction 0.526442424757414 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960748 chr1:154960749 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_105990 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:154960717-154960759
64251 chr7 2394536 2394536 1 + C A rs546597150 2394532 + 2394512 2394552 41 AAGCGCGGCGGCCGCGGAGCCCTGCGAGTAGGCAGCGTTGG AAGCGCGGCGGCCGCGGAGCCCTGAGAGTAGGCAGCGTTGG < 41bp 0.51734147819849 0.780559439522476 0.35908535 0.5091204 prediction 0.526435922647972 Functional Gain - EIF3B ENSG00000106263 UTR5 Human protein_coding chr7:2394532 chr7:2394536 . . 0 25 hm5C_associated_SNPs_105993 0 0 12 DDX3X POSTAR2 ENCODE chr7:2394482-2394548
64251 chr17 42635220 42635220 1 + C G OV 42635216 + 42635196 42635236 41 GCACGGACATCGCCTACAACCAGACCATCATGCCCAACCTT GCACGGACATCGCCTACAACCAGAGCATCATGCCCAACCTT < 41bp 0.527276222666736 0.790475586077412 0.41259176 0.91715246 prediction 0.526398726821352 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42635216 chr17:42635220 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_105997 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42635145-42635247
64251 chr12 106751671 106751671 1 + C G rs144172154 106751667 + 106751647 106751687 41 TCGTGAGCAGCATGGACGTGCTAGCGGAGGAGTTTGGGAAC TCGTGAGCAGCATGGACGTGCTAGGGGAGGAGTTTGGGAAC < 41bp 0.535784337592804 0.798929351758455 0.27727136 0.44236413 prediction 0.526290028331302 Functional Gain - POLR3B ENSG00000013503 CDS Human protein_coding chr12:106751667 chr12:106751671 nonsynonymous SNV 0.798 0 25 hm5C_associated_SNPs_106001 0 0 1 DDX3X POSTAR2 ENCODE chr12:106751552-106751695
64251 chr22 45255655 45255655 1 + C A rs114279873 45255651 + 45255631 45255671 41 GTCACTGGCTGCCGCCAGATCTTACGGAGCCTCCCAGAGCA GTCACTGGCTGCCGCCAGATCTTAAGGAGCCTCCCAGAGCA < 41bp 0.347297880053911 0.763139439856803 0.1877181 0.22626936 prediction 0.526278879713605 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45255651 chr22:45255655 synonymous SNV . 0 25 hm5C_associated_SNPs_106003 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr22:45255640-45255660
64251 chr6 97000466 97000466 1 + C G HNSC 97000462 + 97000442 97000482 41 AGTCCTGTTGTTTCAGTTTTCAACCCACAGCATGCTCCATG AGTCCTGTTGTTTCAGTTTTCAACGCACAGCATGCTCCATG < 41bp 0.492937822574062 0.763137700760409 0.029007971 0.16698796 prediction 0.526275401520818 Functional Gain - UFL1 ENSG00000014123 CDS Human protein_coding chr6:97000462 chr6:97000466 synonymous SNV . 0 25 hm5C_associated_SNPs_106004 0 0 1 IGF2BP2 POSTAR2 ENCODE chr6:97000402-97000502
64251 chr8 22876345 22876345 1 + C G rs78010247 22876341 + 22876321 22876361 41 TAGTGAAAGGCCACAGGACACAGCCTTATTACTGCTGGGGT TAGTGAAAGGCCACAGGACACAGCGTTATTACTGCTGGGGT < 41bp 0.478878673500737 0.763130744743685 0.0133321285 0.08197051 prediction 0.52626148948737 Functional Gain - RHOBTB2 ENSG00000245025 ncRNA_intronic Human antisense chr8:22876341 chr8:22876345 . . 0 25 hm5C_associated_SNPs_106005 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:22876325-22876354
64251 chr19 1258042 1258042 1 + C G rs567549081 1258038 + 1258018 1258058 41 GGAAGGGAGAGGGGAACTACCCCCCCAGCCTGCCCTCCGCC GGAAGGGAGAGGGGAACTACCCCCGCAGCCTGCCCTCCGCC < 41bp 0.53425648678651 0.797379579989408 0.4607877 0.87364876 prediction 0.526246186405796 Functional Gain - MIDN ENSG00000167470 UTR3 Human protein_coding chr19:1258038 chr19:1258042 . . 0 25 hm5C_associated_SNPs_106006 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:1258031-1258067
64251 chr19 56206694 56206694 1 + C G READ 56206690 + 56206670 56206710 41 CCATGATGCCCCCGGGCCCCCCGGCCCCCAACACTAATCCC CCATGATGCCCCCGGGCCCCCCGGGCCCCAACACTAATCCC < 41bp 0.508077177252053 0.771184774756698 0.012517959 0.028772801 prediction 0.526215195009289 Functional Gain - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56206690 chr19:56206694 nonsynonymous SNV 0.942 0 25 hm5C_associated_SNPs_106010 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:56206680-56206700
64251 chr17 38430097 38430097 1 + C T SKCM 38430096 + 38430076 38430116 41 TGCCAGGGATGCTCCCCCTCCCCCACCACCATACCGAATGC TGCCAGGGATGCTCCCCCTCCTCCACCACCATACCGAATGC < 41bp 0.54436697330758 0.807473288531477 0.064520955 0.91336167 prediction 0.526212630447793 Functional Gain - WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38430096 chr17:38430097 synonymous SNV . 0 22 hm5C_associated_SNPs_106011 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:38430086-38430115
64251 chr16 2757959 2757959 1 + T G rs115398997 2757956 + 2757936 2757976 41 CCGGGACAGTCAAGGCTTCTCAATTTGTATTTTCCAGGCAA CCGGGACAGTCAAGGCTTCTCAAGTTGTATTTTCCAGGCAA < 41bp 0.383819732171953 0.763095094019934 0.21396574 0.40903887 prediction 0.526190188039867 Functional Gain - KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2757956 chr16:2757959 . . 0 24 hm5C_associated_SNPs_106014 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:2757940-2758020
64251 chr11 65341027 65341027 1 + C A COAD 65341023 + 65341003 65341043 41 AGGAGCCTCCCGATGCCAGCCTGCCTCCTGACCCGCCACCC AGGAGCCTCCCGATGCCAGCCTGCATCCTGACCCGCCACCC < 41bp 0.655894001444323 0.918979909687111 0.20673338 0.16880399 prediction 0.526171816485577 Functional Gain - FAM89B ENSG00000176973 CDS Human protein_coding chr11:65341023 chr11:65341027 nonsynonymous SNV 0.965 2 25 hm5C_associated_SNPs_106015 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65340992-65341049
64251 chr17 42826844 42826844 1 + C G rs188198587 42826843 + 42826823 42826863 41 CAAAAGAGCTAGAAGGAGGCCCGGGCCTGGCCTTTGAAGTC CAAAAGAGCTAGAAGGAGGCCGGGGCCTGGCCTTTGAAGTC < 41bp 0.573999047934119 0.837079414742629 0.32173836 0.6678392 prediction 0.526160733617022 Functional Gain - DBF4B ENSG00000161692 UTR3 Human protein_coding chr17:42826843 chr17:42826844 . . 0 22 hm5C_associated_SNPs_106016 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42826811-42826849
64251 chr22 19467482 19467482 1 + C A rs13447183 19467478 + 19467458 19467498 41 CAGCGCGAGCGCCAGGCGTCCGGCCGCCGTGGCTATGTTCG CAGCGCGAGCGCCAGGCGTCCGGCAGCCGTGGCTATGTTCG < 41bp 0.534838179932368 0.79790602243375 0.74089587 0.84932303 prediction 0.526135685002765 Functional Gain - CDC45 ENSG00000093009 UTR5 Human protein_coding chr22:19467478 chr22:19467482 . . 0 25 hm5C_associated_SNPs_106018 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:19467440-19467500
64251 chr14 103193131 103193131 1 + C A rs182606768 103193127 + 103193107 103193147 41 GACTCTGGGAACCGCCTCTCCCGCCGGAGCCCCCGAGCCCC GACTCTGGGAACCGCCTCTCCCGCAGGAGCCCCCGAGCCCC < 41bp 0.380469975284976 0.763052872812134 0.32254967 0.34995627 prediction 0.526105745624268 Functional Gain - RCOR1 ENSG00000089902 UTR3 Human protein_coding chr14:103193127 chr14:103193131 . . 0 25 hm5C_associated_SNPs_106020 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr14:103193097-103193135
64251 chr3 186793423 186793423 1 + C A rs7629263 186793419 + 186793399 186793439 41 CCTCCCATCCAAGCGCAAGACTGACGTGTGCTACTACTACC CCTCCCATCCAAGCGCAAGACTGAAGTGTGCTACTACTACC < 41bp 0.351112277946566 0.76304340740556 0.009632587 0.04427281 prediction 0.52608681481112 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186793419 chr3:186793423 nonsynonymous SNV 0.373 1 25 hm5C_associated_SNPs_106021 0 0 3 DDX6 POSTAR2 ENCODE chr3:186793406-186793436
64251 chr3 57542935 57542935 1 + T A BLCA 57542931 + 57542911 57542951 41 GTGGTAGAGGCTGGGCCTGGCACCTGCACTTTTGACCACCG GTGGTAGAGGCTGGGCCTGGCACCAGCACTTTTGACCACCG < 41bp 0.591745796277413 0.854745855429253 0.33476216 0.42863464 prediction 0.52600011830368 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542931 chr3:57542935 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_106026 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:57542886-57542954
64251 chr12 69783937 69783937 1 + T C rs315121 69783935 + 69783915 69783955 41 TGTTTTCTTTAGTTGCAGAGCTTGAAGTGAAAACCAGAGAA TGTTTTCTTTAGTTGCAGAGCTCGAAGTGAAAACCAGAGAA < 41bp 0.503712664172314 0.76670674593967 0.4604833 0.3338052 prediction 0.525988163534711 Functional Gain - YEATS4 ENSG00000127337 CDS Human protein_coding chr12:69783935 chr12:69783937 synonymous SNV . 0 23 hm5C_associated_SNPs_106027 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221659 chr12:69783920-69783940
64251 chr17 57744280 57744280 1 + T C STAD 57744278 + 57744258 57744298 41 TTCAGGTGGCTTCTAAATATCATGAACAACTGTCAACTCAG TTCAGGTGGCTTCTAAATATCACGAACAACTGTCAACTCAG < 41bp 0.526367422341893 0.78933028314166 0.02866584 0.04031983 prediction 0.525925721599533 Functional Gain - CLTC ENSG00000141367 CDS Human protein_coding chr17:57744278 chr17:57744280 synonymous SNV . 0 23 hm5C_associated_SNPs_106034 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57744186-57744320
64251 chr12 94542539 94542539 1 + C A rs562037235 94542535 + 94542515 94542555 41 GCCGGAGCGCGCAGGGCTTGCTGCCGCCACCGCCGCTGCAC GCCGGAGCGCGCAGGGCTTGCTGCAGCCACCGCCGCTGCAC < 41bp 0.60840155569285 0.871326586309478 0.41615924 0.48888552 prediction 0.525850061233257 Functional Gain - PLXNC1 ENSG00000136040 UTR5 Human protein_coding chr12:94542535 chr12:94542539 . . 0 25 hm5C_associated_SNPs_106037 0 0 1 EIF3H POSTAR2 ENCODE chr12:94542525-94542592
64251 chr2 190526224 190526224 1 + C G rs1132360 190526223 + 190526203 190526243 41 TCCTTCAGGGCTGAGCCATCCCGCGTGTCTTGCGCTCGGTG TCCTTCAGGGCTGAGCCATCCGGCGTGTCTTGCGCTCGGTG < 41bp 0.533546275750578 0.796447207057987 0.6199872 0.9066527 prediction 0.525801862614818 Functional Gain - ASNSD1 ENSG00000138381 UTR5 Human protein_coding chr2:190526223 chr2:190526224 . . 0 22 hm5C_associated_SNPs_106041 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:190526201-190526234
64251 chr1 155837976 155837976 1 + T G HNSC 155837974 + 155837954 155837994 41 TGCGGAGAGACAAAGATGGTCCTGGGAGGGAAGGTGGACGT TGCGGAGAGACAAAGATGGTCCGGGGAGGGAAGGTGGACGT < 41bp 0.418510045652655 0.762899464176228 0.50169253 0.78587383 prediction 0.525798928352456 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155837974 chr1:155837976 synonymous SNV . 0 23 hm5C_associated_SNPs_106042 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:155837960-155838000
64251 chr1 179033506 179033506 1 + C A rs143013339 179033502 + 179033482 179033522 41 GTCCCCTTATGACTCTGGCCCGCGCCTCTTGGACATCATTG GTCCCCTTATGACTCTGGCCCGCGACTCTTGGACATCATTG < 41bp 0.348323198611782 0.762896196749769 0.07998443 0.12655637 prediction 0.525792393499537 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179033502 chr1:179033506 synonymous SNV . 0 25 hm5C_associated_SNPs_106044 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:179033482-179033512
64251 chr12 125609313 125609313 1 + C G LUAD 125609312 + 125609292 125609332 41 TGGAAGAGAAGGCCATGAAGCCGGGTGAGTGTGCCTCTTCA TGGAAGAGAAGGCCATGAAGCGGGGTGAGTGTGCCTCTTCA < 41bp 0.577548114791905 0.840437268866138 0.9285568 0.952111 prediction 0.525778308148466 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125609312 chr12:125609313 nonsynonymous SNV 0.984 4 22 hm5C_associated_SNPs_106045 0 0 2 U2AF2 POSTAR2 ENCODE chr12:125609237-125609330
64251 chr16 71950482 71950482 1 + T C LUSC 71950480 + 71950460 71950500 41 GAAGACTACCTCGTGGAGGCCATGGAGATCCTGGAGCTGTA GAAGACTACCTCGTGGAGGCCACGGAGATCCTGGAGCTGTA < 41bp 0.513604253832951 0.77648109968031 0.33539385 0.3324445 prediction 0.525753691694717 Functional Gain - IST1 ENSG00000182149 CDS Human protein_coding chr16:71950480 chr16:71950482 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106047 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:71950461-71950497
64251 chr3 44763161 44763161 1 + T C LIHC 44763159 + 44763139 44763179 41 ATCAGAATACACACCTTATTCATCATCAGAGAATTCACACT ATCAGAATACACACCTTATTCACCATCAGAGAATTCACACT < 41bp 0.496939952557027 0.762874771292612 0.003908038 0.005062014 prediction 0.525749542585224 Functional Gain - ZNF502 ENSG00000196653 CDS Human protein_coding chr3:44763159 chr3:44763161 synonymous SNV . 0 23 hm5C_associated_SNPs_106049 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr3:44763147-44763164
64251 chr10 101090463 101090463 1 + T C BLCA 101090461 + 101090441 101090481 41 CTGACCCCCCTGGGAGACTGCTTCATGCTGCGCTCAGACGC CTGACCCCCCTGGGAGACTGCTCCATGCTGCGCTCAGACGC < 41bp 0.476127809344959 0.762863295011 0.2097727 0.9347863 prediction 0.525726590022 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101090461 chr10:101090463 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106052 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr10:101090463-101090464
64251 chr11 124564312 124564312 1 + T C UCEC 124564310 + 124564290 124564330 41 AGAAAATGAAAACAAATAGTCTTCAAAATGAGGAAAAAGAG AGAAAATGAAAACAAATAGTCTCCAAAATGAGGAAAAAGAG < 41bp 0.520988970119416 0.783844707878426 0.522348 0.943571 prediction 0.52571147551802 Functional Gain - SPA17 ENSG00000064199 CDS Human protein_coding chr11:124564310 chr11:124564312 synonymous SNV . 0 23 hm5C_associated_SNPs_106054 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr11:124564311-124564312
64251 chr4 152021718 152021718 1 + C A PAAD 152021714 + 152021694 152021734 41 TATAAGAAATATTGGAAAGACGCTCGTCACCAGGACCCAAG TATAAGAAATATTGGAAAGACGCTAGTCACCAGGACCCAAG < 41bp 0.349139388227713 0.762840672312467 0.15430033 0.3303938 prediction 0.525681344624933 Functional Gain - RPS3A ENSG00000145425 CDS Human protein_coding chr4:152021714 chr4:152021718 synonymous SNV . 0 25 hm5C_associated_SNPs_106059 0 0 1 METAP2 POSTAR2 ENCODE chr4:152021698-152021742
64251 chr1 8021764 8021764 1 + C G rs566749983 8021760 + 8021740 8021780 41 GAGGCCGGACGGCGCGCGTGCGTGCTGGCGTGCGTTCATTT GAGGCCGGACGGCGCGCGTGCGTGGTGGCGTGCGTTCATTT < 41bp 0.532129507022668 0.794969238725487 0.42018306 0.8409363 prediction 0.525679463405637 Functional Gain - PARK7 ENSG00000116288 UTR5 Human protein_coding chr1:8021760 chr1:8021764 . . 0 25 hm5C_associated_SNPs_106060 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:8021720-8021820
64251 chrX 17768243 17768243 1 + C G HNSC 17768239 + 17768219 17768259 41 AGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCAT AGGAGGACCCGATCCTCAGCCGCAGTCCGAGTCCAGTGCAT < 41bp 0.475411589112477 0.76280685235996 0.23609364 0.51599574 prediction 0.525613704719919 Functional Gain - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768239 chrX:17768243 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_106064 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr16 679958 679958 1 + C G rs76999357 679954 + 679934 679974 41 GGGTCTCATTCTGACCAGACCAGGCTCCTGTTACCCTGCCT GGGTCTCATTCTGACCAGACCAGGGTCCTGTTACCCTGCCT < 41bp 0.478082958325638 0.762804252392055 0.67045784 0.90590036 prediction 0.525608504784109 Functional Gain - RAB40C ENSG00000127578;ENSG00000197562 upstream;downstream Human other chr16:679954 chr16:679958 . . 0 25 hm5C_associated_SNPs_106065 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:679940-679971
64251 chr16 67200492 67200492 1 + C A LUSC 67200488 + 67200468 67200508 41 AGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCA AGTGTCTCTTTGGGCCACTTCAGGAGGGGCCGAGCAATGCA < 41bp 0.657713889563103 0.920507534470365 0.8941738 0.90106356 prediction 0.525587289814523 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67200488 chr16:67200492 nonsynonymous SNV 0.720 0 25 hm5C_associated_SNPs_106068 0 0 10 DDX24 POSTAR2 ENCODE chr16:67200479-67200512
64251 chr22 43011303 43011303 1 + C G rs549604353 43011302 + 43011282 43011322 41 ATTCGGGGTGACGCCCGAATCCTCACTGCTAATGTGAGACG ATTCGGGGTGACGCCCGAATCGTCACTGCTAATGTGAGACG < 41bp 0.550293544417949 0.813076693420486 0.022140801 0.013613284 prediction 0.525566298005074 Functional Gain - RNU12 ENSG00000270022 ncRNA_exonic Human lincRNA chr22:43011302 chr22:43011303 . . 0 22 hm5C_associated_SNPs_106070 0 0 105 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr22:43011300-43011360
64251 chr3 127771264 127771264 1 + C G rs547385728 127771260 + 127771240 127771280 41 CCCCGCGCCGCGCCGCGCCGCTTGCCGCCGGGCTAGCACTG CCCCGCGCCGCGCCGCGCCGCTTGGCGCCGGGCTAGCACTG < 41bp 0.499281301864016 0.762777251861 0.16728398 0.21593621 prediction 0.525554503721999 Functional Gain - SEC61A1 ENSG00000058262 UTR5 Human protein_coding chr3:127771260 chr3:127771264 . . 0 25 hm5C_associated_SNPs_106071 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:127771254-127771275
64251 chr15 23811566 23811566 1 + C G LUAD 23811562 + 23811542 23811582 41 GAGTTTGTTCCAGGGCAGCCCTACCGGGGCCGCTGGGTTGC GAGTTTGTTCCAGGGCAGCCCTACGGGGGCCGCTGGGTTGC < 41bp 0.539361985878261 0.802134227561089 0.124371916 0.4881738 prediction 0.525544483365655 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811562 chr15:23811566 nonsynonymous SNV 0.992 1 25 hm5C_associated_SNPs_106073 0 0 2 RBM15 POSTAR2 ENCODE chr15:23811547-23811601
64251 chr2 27248569 27248569 1 + T C rs200184079 27248567 + 27248547 27248587 41 CATCAGCCCGAAATGGCGGCCATGAGACTGATGCCCAAATT CATCAGCCCGAAATGGCGGCCACGAGACTGATGCCCAAATT < 41bp 0.5339398600642 0.796708229895419 0.21590447 0.30827492 prediction 0.525536739662438 Functional Gain - MAPRE3 ENSG00000084764 CDS Human protein_coding chr2:27248567 chr2:27248569 synonymous SNV . 0 23 hm5C_associated_SNPs_106074 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27248527-27248574
64251 chr5 176873879 176873879 1 + C A rs111752154 176873875 + 176873855 176873895 41 CCCCCGGGCCGCCGCCGCCTCCCCCCGCAGGCCCGGGGCTC CCCCCGGGCCGCCGCCGCCTCCCCACGCAGGCCCGGGGCTC < 41bp 0.414482058439203 0.762765165509355 0.069556594 0.06344709 prediction 0.525530331018709 Functional Gain - PRR7-AS1 ENSG00000246334 ncRNA_intronic Human antisense chr5:176873875 chr5:176873879 . . 0 25 hm5C_associated_SNPs_106075 0 0 1 DDX3X POSTAR2 ENCODE chr5:176873874-176873947
64251 chr1 118501624 118501624 1 + C G LUSC 118501623 + 118501603 118501643 41 ATTTCAAAAGTCAGCCAAGTCCGGGTAAGTGTCTTTGTATA ATTTCAAAAGTCAGCCAAGTCGGGGTAAGTGTCTTTGTATA < 41bp 0.486704094255775 0.762763896606823 0.62019736 0.9226481 prediction 0.525527793213647 Functional Gain - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118501623 chr1:118501624 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_106076 0 0 1 PRPF8 POSTAR2 ENCODE chr1:118501606-118501655
64251 chr20 61303250 61303250 1 + C A rs76616864 61303246 + 61303226 61303266 41 AGCTCCAGAGCAGCGTCTGACCACCGCCCGCGCCCACCCGG AGCTCCAGAGCAGCGTCTGACCACAGCCCGCGCCCACCCGG < 41bp 0.377767720544078 0.762739492398934 0.11906195 0.10644695 prediction 0.525478984797867 Functional Gain - SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303246 chr20:61303250 . . 0 25 hm5C_associated_SNPs_106079 0 0 2 NOL12 POSTAR2 ENCODE chr20:61303231-61303259
64251 chr2 99995517 99995517 1 + C G rs11896520 99995516 + 99995496 99995536 41 ACATAGTAAAAATGTAAACACCGAAAAGCTAAGAGCCCCTA ACATAGTAAAAATGTAAACACGGAAAAGCTAAGAGCCCCTA < 41bp 0.467725068418925 0.76267795368346 0.056791186 0.32212582 prediction 0.52535590736692 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99995516 chr2:99995517 synonymous SNV . 0 22 hm5C_associated_SNPs_106091 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:99995496-99995534
64251 chr14 105715530 105715530 1 + C G rs61743879 105715526 + 105715506 105715546 41 GTTCAACAACGAGCTCATGGCCGACGTGCACTTCGTCGTGG GTTCAACAACGAGCTCATGGCCGAGGTGCACTTCGTCGTGG < 41bp 0.533690481255445 0.796345091589061 0.1801914 0.38978633 prediction 0.525309220667233 Functional Gain - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105715526 chr14:105715530 nonsynonymous SNV 0.683 4 25 hm5C_associated_SNPs_106095 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr14:105715528-105715548
64251 chr16 56866247 56866247 1 + C T SKCM 56866246 + 56866226 56866266 41 ACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTCTC ACGACGATGGCACCAGCTCCCTACAAGACAGGCTCACTCTC < 41bp 0.519223843247123 0.781867480416249 0.026884288 0.62297356 prediction 0.525287274338252 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56866246 chr16:56866247 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_106096 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:56866231-56866273
64251 chr19 49513273 49513273 1 + C A rs1062708 49513269 + 49513249 49513289 41 AAGGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCTTCAC AAGGCGACGGGCAAGATCTCCAAGATGGGCCGCTCCTTCAC < 41bp 0.656222922646348 0.918861168289403 0.1789135 0.15174574 prediction 0.525276491286111 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49513269 chr19:49513273 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_106098 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:49513260-49513280
64251 chr6 26459791 26459791 1 + C G rs72500817 26459787 + 26459767 26459807 41 TACGTTACGCTGCCATCTGTCACCCGAGAAAAATGCTGAGG TACGTTACGCTGCCATCTGTCACCGGAGAAAAATGCTGAGG < 41bp 0.549981840269496 0.812619593443865 0.32520455 0.4766259 prediction 0.525275506348738 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459787 chr6:26459791 synonymous SNV . 0 25 hm5C_associated_SNPs_106100 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26459767-26459796
64251 chr1 155699156 155699156 1 + C G HNSC 155699155 + 155699135 155699175 41 TGAAAAGAGAAGATAAAAGCCCGGTAGGAAAACTGGGTGTC TGAAAAGAGAAGATAAAAGCCGGGTAGGAAAACTGGGTGTC < 41bp 0.466553140681575 0.76262929105148 0.7701374 0.8897935 prediction 0.52525858210296 Functional Gain - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155699155 chr1:155699156 nonsynonymous SNV 0.895 0 22 hm5C_associated_SNPs_106102 0 0 3 DDX55 POSTAR2 ENCODE chr1:155699069-155699160
64251 chr10 1046704 1046704 1 + C G rs199736710 1046703 + 1046683 1046723 41 ATCACTGCCCTGGCCCACCTCCGTGCTGCGGTCCTGTATGT ATCACTGCCCTGGCCCACCTCGGTGCTGCGGTCCTGTATGT < 41bp 0.449215216529351 0.7626263504093 0.6312766 0.61795264 prediction 0.5252527008186 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1046703 chr10:1046704 nonsynonymous SNV 0.365 4 22 hm5C_associated_SNPs_106103 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr10:1046683-1046713
64251 chr2 239360121 239360121 1 + T A rs10178728 239360117 + 239360097 239360137 41 CCTGCCCTGCCCTGCAGTGTCTGCTCAGCTCCCACTGCTTC CCTGCCCTGCCCTGCAGTGTCTGCACAGCTCCCACTGCTTC < 41bp 0.492907122669978 0.762606410902365 0.20205534 0.39609614 prediction 0.525212821804731 Functional Gain - ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239360117 chr2:239360121 . . 0 25 hm5C_associated_SNPs_106109 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:239359993-239360161
64251 chr2 10863028 10863028 1 + C A OV 10863024 + 10863004 10863044 41 CTGGCGATAAGGAAAATTTGCAAGCTCTGGAGAGGATGAAT CTGGCGATAAGGAAAATTTGCAAGATCTGGAGAGGATGAAT < 41bp 0.359464363691541 0.762600767562162 0.1895771 0.23343769 prediction 0.525201535124323 Functional Gain - ATP6V1C2 ENSG00000143882 CDS Human protein_coding chr2:10863024 chr2:10863028 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_106112 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10863011-10863042
64251 chr20 34054828 34054828 1 + T A LUSC 34054824 + 34054804 34054844 41 ACCTGAAAGGGGAGCACGGTCGCCTTCTCAGTCTATGGCGG ACCTGAAAGGGGAGCACGGTCGCCATCTCAGTCTATGGCGG < 41bp 0.428180670301335 0.762588989015213 0.25639886 0.7041935 prediction 0.525177978030426 Functional Gain - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34054824 chr20:34054828 nonsynonymous SNV 0.957 3 25 hm5C_associated_SNPs_106115 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221667 chr20:34054820-34054840
64251 chr7 21470382 21470382 1 + T C UCEC 21470380 + 21470360 21470400 41 AGCTTGCATCAGTGCCTAACCTTCAGACAGTGAGCGTTGCC AGCTTGCATCAGTGCCTAACCTCCAGACAGTGAGCGTTGCC < 41bp 0.552626913488406 0.815214404315289 0.16058505 0.94156706 prediction 0.525174981653767 Functional Gain - SP4 ENSG00000105866 CDS Human protein_coding chr7:21470380 chr7:21470382 synonymous SNV . 0 23 hm5C_associated_SNPs_106116 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:21470381-21470382
64251 chr8 87439926 87439926 1 + C G rs60177164 87439925 + 87439905 87439945 41 TTATTATGTGGATCATAACACCAGAACAACAACGTGGCAGC TTATTATGTGGATCATAACACGAGAACAACAACGTGGCAGC < 41bp 0.560856301679118 0.823443539762218 0.2506652 0.51294154 prediction 0.5251744761662 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87439925 chr8:87439926 synonymous SNV . 0 22 hm5C_associated_SNPs_106117 0 0 2 GPKOW POSTAR2 ENCODE chr8:87439875-87439939
64251 chr14 102904477 102904477 1 + C G rs147312456 102904476 + 102904456 102904496 41 GCCTGTTCTGCAGCGCGTTGCCGGGCGCCGGGCTGCGCTGG GCCTGTTCTGCAGCGCGTTGCGGGGCGCCGGGCTGCGCTGG < 41bp 0.444888042576826 0.762580867301796 0.9073143 0.9411828 prediction 0.525161734603591 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102904476 chr14:102904477 nonsynonymous SNV 0.028 1 22 hm5C_associated_SNPs_106119 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr14:102904460-102904480
64251 chr18 77798511 77798511 1 + C G BLCA 77798510 + 77798490 77798530 41 GGGGCGGGGTCTCAGGTTTCCCTGACTCCAGACTTCTCAGC GGGGCGGGGTCTCAGGTTTCCGTGACTCCAGACTTCTCAGC < 41bp 0.451847764853764 0.762580447866712 0.11774826 0.3107198 prediction 0.525160895733424 Functional Gain - RBFA ENSG00000101546 CDS Human protein_coding chr18:77798510 chr18:77798511 nonsynonymous SNV 0.933 0 22 hm5C_associated_SNPs_106120 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr18:77798508-77798544
64251 chr12 120119183 120119183 1 + T G rs4213 120119181 + 120119161 120119201 41 CTTTGGACCAAAGCAGACTTCTTTATACGCAGCTCAGTTTC CTTTGGACCAAAGCAGACTTCTGTATACGCAGCTCAGTTTC < 41bp 0.514189262632811 0.776757077073281 0.30464873 0.4861247 prediction 0.525135628880939 Functional Gain - PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120119181 chr12:120119183 . . 0 23 hm5C_associated_SNPs_106122 0 0 6 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:120119161-120119184
64251 chr1 2333744 2333744 1 + T C COAD 2333742 + 2333722 2333762 41 CCGATTCTGGTGATGTACTTCATCATGCTCTTCTGTATCAC CCGATTCTGGTGATGTACTTCACCATGCTCTTCTGTATCAC < 41bp 0.524468038726547 0.786987078403391 0.09347671 0.076699555 prediction 0.52503807935369 Functional Gain - RER1 ENSG00000157916 CDS Human protein_coding chr1:2333742 chr1:2333744 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_106126 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:2333672-2333764
64251 chr16 81743439 81743439 1 + C A rs542882672 81743435 + 81743415 81743455 41 TCAAGGCAGGAAGACGTTTGCAACCGCGACAAAATAACTCT TCAAGGCAGGAAGACGTTTGCAACAGCGACAAAATAACTCT < 41bp 0.365416308030671 0.762498893006386 0.14025134 0.1668978 prediction 0.524997786012772 Functional Gain - CMIP ENSG00000153815 UTR3 Human protein_coding chr16:81743435 chr16:81743439 . . 0 25 hm5C_associated_SNPs_106131 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:81743430-81743468
64251 chr2 160035657 160035657 1 + C G PRAD 160035653 + 160035633 160035673 41 GAGAGCAGACGGGGAAAACACGGCCTTCCTGTGTGAGCCCA GAGAGCAGACGGGGAAAACACGGCGTTCCTGTGTGAGCCCA < 41bp 0.55168347057416 0.814174575082135 0.77847993 0.89988476 prediction 0.52498220901595 Functional Gain - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160035653 chr2:160035657 synonymous SNV . 0 25 hm5C_associated_SNPs_106133 0 0 1 PRPF8 POSTAR2 ENCODE chr2:160035639-160035718
64251 chr4 139936967 139936967 1 + C G rs192413106 139936963 + 139936943 139936983 41 CCGACGCAGCGGTGTTGCACCTCCCTCTCCGGCTCTGCTGC CCGACGCAGCGGTGTTGCACCTCCGTCTCCGGCTCTGCTGC < 41bp 0.534777346127104 0.797239217232576 0.30878407 0.25432193 prediction 0.524923742210944 Functional Gain - NOCT ENSG00000151014 UTR5 Human protein_coding chr4:139936963 chr4:139936967 . . 0 25 hm5C_associated_SNPs_106138 0 0 1 RBM15 POSTAR2 ENCODE chr4:139936956-139937038
64251 chr7 142962124 142962124 1 + T C rs147245180 142962122 + 142962102 142962142 41 CGTTTCCTCACCGCCGTGAACTTGGAGCATCCAGAGATGCT CGTTTCCTCACCGCCGTGAACTCGGAGCATCCAGAGATGCT < 41bp 0.495499028723916 0.762452192833608 0.17606884 0.16162616 prediction 0.524904385667216 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962122 chr7:142962124 nonsynonymous SNV 0.607 0 23 hm5C_associated_SNPs_106140 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:142962085-142962134
64251 chr19 13064354 13064354 1 + C A rs376322659 13064350 + 13064330 13064370 41 CCCAGTCTGGCCTTGGCCTCCAGCCTGGAGAAGGGCTAACA CCCAGTCTGGCCTTGGCCTCCAGCATGGAGAAGGGCTAACA < 41bp 0.616283363757148 0.878697314673996 0.8769077 0.46729353 prediction 0.524827901833696 Functional Gain - RAD23A ENSG00000179262 UTR3 Human protein_coding chr19:13064350 chr19:13064354 . . 0 25 hm5C_associated_SNPs_106143 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:13064198-13064381
64251 chr19 34302347 34302347 1 + C T SKCM 34302346 + 34302326 34302366 41 GCCCTCATCGAGGAGGTCTTCCCCGAGACCGGAGACGTCAT GCCCTCATCGAGGAGGTCTTCTCCGAGACCGGAGACGTCAT < 41bp 0.518833226869556 0.781244250157332 0.12007934 0.22447532 prediction 0.524822046575551 Functional Gain - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34302346 chr19:34302347 nonsynonymous SNV 0.980 3 22 hm5C_associated_SNPs_106144 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:34302315-34302352
64251 chr19 804074 804074 1 + C G SKCM 804073 + 804053 804093 41 AAGAAGTTCAAAGGTGACAGCCGAAGTGCAGGCGTCCCCTC AAGAAGTTCAAAGGTGACAGCGGAAGTGCAGGCGTCCCCTC < 41bp 0.590143122948199 0.852536509121799 0.33644328 0.660872 prediction 0.5247867723472 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804073 chr19:804074 nonsynonymous SNV 0.418 2 22 hm5C_associated_SNPs_106149 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804051-804078
64251 chr12 70149324 70149324 1 + T G LIHC 70149322 + 70149302 70149342 41 TGTCATCTACCGGCCACACCCTTCAGCTTTATCCTCTGTAC TGTCATCTACCGGCCACACCCTGCAGCTTTATCCTCTGTAC < 41bp 0.5953175568154 0.857704976417199 0.025377035 0.09202331 prediction 0.524774839203598 Functional Gain - RAB3IP ENSG00000127328 CDS Human protein_coding chr12:70149322 chr12:70149324 nonsynonymous SNV 0.949 0 23 hm5C_associated_SNPs_106150 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:70149303-70149327
64251 chr17 55079432 55079432 1 + C A STAD 55079428 + 55079408 55079448 41 TGGCCAGAACTGCCTAAATTCAGTCAGCTGAAGTGGAAGGC TGGCCAGAACTGCCTAAATTCAGTAAGCTGAAGTGGAAGGC < 41bp 0.349045947502731 0.762382618580971 0.26675075 0.3648625 prediction 0.524765237161942 Functional Gain - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55079428 chr17:55079432 nonsynonymous SNV 0.989 1 25 hm5C_associated_SNPs_106154 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:55079414-55079452
64251 chr22 38046244 38046244 1 + C A UCEC 38046240 + 38046220 38046260 41 GCGCTGATCCAGAGCGCAGACACCCTCTTCCCTGGAGGTGA GCGCTGATCCAGAGCGCAGACACCATCTTCCCTGGAGGTGA < 41bp 0.330488801974725 0.762345487047054 0.14757472 0.22470537 prediction 0.524690974094108 Functional Gain - SH3BP1 ENSG00000100092 CDS Human protein_coding chr22:38046240 chr22:38046244 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_106158 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38046216-38046254
64251 chr9 102595026 102595026 1 + T G LUAD 102595023 + 102595003 102595043 41 CCTGGCAAATAAAAACTGCCCAGTAGACAAGAGACGTCGAA CCTGGCAAATAAAAACTGCCCAGGAGACAAGAGACGTCGAA < 41bp 0.379656490232106 0.762337740262381 0.13846272 0.42724 prediction 0.524675480524762 Functional Gain - NR4A3 ENSG00000119508 CDS Human protein_coding chr9:102595023 chr9:102595026 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_106161 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:102595016-102595054
64251 chr11 64126704 64126704 1 + C A rs547326193 64126700 + 64126680 64126720 41 CCGCGCGGGCCCCAGCGACCCGCCCGCCATGGGGGACGAGG CCGCGCGGGCCCCAGCGACCCGCCAGCCATGGGGGACGAGG < 41bp 0.520645516728189 0.782982322108175 0.06864318 0.2261338 prediction 0.524673610759972 Functional Gain - RPS6KA4 ENSG00000162302 UTR5 Human protein_coding chr11:64126700 chr11:64126704 . . 0 25 hm5C_associated_SNPs_106162 0 0 1 DDX3X POSTAR2 ENCODE chr11:64126642-64126761
64251 chr16 2132740 2132740 1 + C A rs560393153 2132736 + 2132716 2132756 41 GTTCCCACGCTGTGCGAGCACTCCCGGCCCAGCTTCAGGCC GTTCCCACGCTGTGCGAGCACTCCAGGCCCAGCTTCAGGCC < 41bp 0.369978168998248 0.762299260311435 0.15679029 0.9181144 prediction 0.52459852062287 Functional Gain - TSC2 ENSG00000103197 intronic Human protein_coding chr16:2132736 chr16:2132740 . . 0 25 hm5C_associated_SNPs_106168 0 0 4 AKAP8L POSTAR2 ENCODE chr16:2132728-2132782
64251 chr1 51440093 51440093 1 + C A rs12855 51440089 + 51440069 51440109 41 CATAAGTGAAAATCTTACAACAGGCTTATGAATATATTTAA CATAAGTGAAAATCTTACAACAGGATTATGAATATATTTAA < 41bp 0.398213217788536 0.762286940112623 0.26719213 0.22347715 prediction 0.524573880225245 Functional Gain - CDKN2C ENSG00000123080 UTR3 Human protein_coding chr1:51440089 chr1:51440093 . . 0 25 hm5C_associated_SNPs_106171 0 1 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:51440076-51440095
64251 chr17 73780975 73780975 1 + C G UCEC 73780974 + 73780954 73780994 41 ACAAGACCATGTCGAAGGGCCCCGGGCCCGGCGGCTCCGCA ACAAGACCATGTCGAAGGGCCGCGGGCCCGGCGGCTCCGCA < 41bp 0.57983726630898 0.842120565769399 0.30183074 0.56679565 prediction 0.524566598920837 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73780974 chr17:73780975 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_106172 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr17:73780960-73780980
64251 chr6 35196434 35196434 1 + T C UCEC 35196432 + 35196412 35196452 41 AGGATAATGCAGGTTGTGTGCATGACTGTGTCAACATCCCT AGGATAATGCAGGTTGTGTGCACGACTGTGTCAACATCCCT < 41bp 0.493189066369381 0.762271192511667 0.13396612 0.114084244 prediction 0.524542385023334 Functional Gain - SCUBE3 ENSG00000146197 CDS Human protein_coding chr6:35196432 chr6:35196434 synonymous SNV . 0 23 hm5C_associated_SNPs_106176 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:35196414-35196444
64251 chr19 44653030 44653030 1 + T C GBM 44653028 + 44653008 44653048 41 CAAGATGTGATGCTGGAGAACTTCAGGAACCTGCTGTCAGT CAAGATGTGATGCTGGAGAACTCCAGGAACCTGCTGTCAGT < 41bp 0.483540346900997 0.762216557372498 0.17327744 0.93580234 prediction 0.524433114744997 Functional Gain - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44653028 chr19:44653030 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_106184 0 0 3 BUD13 POSTAR2 ENCODE chr19:44652935-44653051
64251 chr7 128851576 128851576 1 + C T LUAD 128851575 + 128851555 128851595 41 CTCGGAGAGGAGCCATACTGCCCCAGGATATTTCTGTCACC CTCGGAGAGGAGCCATACTGCTCCAGGATATTTCTGTCACC < 41bp 0.516201445592057 0.778415326248523 0.11832327 0.5061993 prediction 0.524427761312932 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128851575 chr7:128851576 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_106185 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:128851561-128851590
64251 chr12 58190184 58190184 1 + C A rs62000432 58190180 + 58190160 58190200 41 CAGCATGTGGTGGGCATGGCCCCCCTCTCTGTTGGCTCCCT CAGCATGTGGTGGGCATGGCCCCCATCTCTGTTGGCTCCCT < 41bp 0.355844093869724 0.762183721582399 0.053237528 0.04327771 prediction 0.524367443164799 Functional Gain - TSFM ENSG00000123297 CDS Human protein_coding chr12:58190180 chr12:58190184 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_106189 2 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:58190164-58190191
64251 chr16 19091074 19091074 1 + T A rs149280117 19091070 + 19091050 19091090 41 GCCCTGCATTTAATCAGCACCTGATGACTTGGCAGGACTTG GCCCTGCATTTAATCAGCACCTGAAGACTTGGCAGGACTTG < 41bp 0.514616524423952 0.776792463161246 0.06316668 0.065790474 prediction 0.524351877474588 Functional Gain - COQ7 ENSG00000167186 UTR3 Human protein_coding chr16:19091070 chr16:19091074 . . 0 25 hm5C_associated_SNPs_106193 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:19091030-19091085
64251 chr4 100521877 100521877 1 + T G COAD 100521875 + 100521855 100521895 41 TCTCATCCCAATGAAGAACTCCTGAGAGCCCTCATTGTAAG TCTCATCCCAATGAAGAACTCCGGAGAGCCCTCATTGTAAG < 41bp 0.426380058047255 0.762174836955423 0.056795716 0.1346544 prediction 0.524349673910846 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100521875 chr4:100521877 nonsynonymous SNV 0.958 4 23 hm5C_associated_SNPs_106194 0 0 3 AGGF1 POSTAR2 ENCODE chr4:100521825-100521891
64251 chr3 183855595 183855595 1 + T A LIHC 183855591 + 183855571 183855611 41 ACCAGAGCCCTTGAGGAACACAGGTCAGGATGGGAAAATGA ACCAGAGCCCTTGAGGAACACAGGACAGGATGGGAAAATGA < 41bp 0.505614579095588 0.767767071623751 0.123933434 0.19478771 prediction 0.524304985056326 Functional Gain - EIF2B5 ENSG00000145191 splicing Human protein_coding chr3:183855591 chr3:183855595 . 0.998 0 25 hm5C_associated_SNPs_106196 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr3:183855574-183855612
64251 chr12 57881962 57881962 1 + T A KIRC 57881958 + 57881938 57881978 41 CCCGGGGCAGAGCAGAGGTGCTCATCAGCACTGTAGGCCCG CCCGGGGCAGAGCAGAGGTGCTCAACAGCACTGTAGGCCCG < 41bp 0.432945456859914 0.76214426067922 0.5767517 0.778434 prediction 0.52428852135844 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57881958 chr12:57881962 nonsynonymous SNV 0.987 1 25 hm5C_associated_SNPs_106197 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr12:57881947-57881979
64251 chr1 201757670 201757670 1 + C A UCEC 201757666 + 201757646 201757686 41 CCCACCCACGAGGCGGCCTTCGAGCTGTACAGCGGCTCCCA CCCACCCACGAGGCGGCCTTCGAGATGTACAGCGGCTCCCA < 41bp 0.373689063806103 0.76213636113884 0.8938843 0.91772854 prediction 0.52427272227768 Functional Gain - NAV1 ENSG00000134369 CDS Human protein_coding chr1:201757666 chr1:201757670 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_106198 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:201757666-201757712
64251 chr12 57919750 57919750 1 + C T SKCM 57919749 + 57919729 57919769 41 AGCGGCCAAGGCACAGCATCCCCCACTACCCCCTCCCAGCA AGCGGCCAAGGCACAGCATCCTCCACTACCCCCTCCCAGCA < 41bp 0.515803648119923 0.777920269097599 0.020730585 0.8777594 prediction 0.524233241955351 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57919749 chr12:57919750 synonymous SNV . 0 22 hm5C_associated_SNPs_106203 0 0 5 DDX59 POSTAR2 ENCODE chr12:57919683-57919768
64251 chr19 54647834 54647834 1 + C A LUAD 54647830 + 54647810 54647850 41 CCTGGCCCAGAAGGTAGATCCTGCCCAGAAGGAGAAGGAAG CCTGGCCCAGAAGGTAGATCCTGCACAGAAGGAGAAGGAAG < 41bp 0.339152223642028 0.762069347883976 0.07012877 0.1975756 prediction 0.524138695767952 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54647830 chr19:54647834 synonymous SNV . 0 25 hm5C_associated_SNPs_106206 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr19:54647820-54647840
64251 chr7 148876129 148876129 1 + T A rs61732817 148876125 + 148876105 148876145 41 CCACAGGCGGACCTCAGCAGCACCTCCCAGGACCATGCCAG CCACAGGCGGACCTCAGCAGCACCACCCAGGACCATGCCAG < 41bp 0.44159593141791 0.762068345363032 0.06062773 0.06214243 prediction 0.524136690726065 Functional Gain - ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876125 chr7:148876129 nonsynonymous SNV 0.852 0 25 hm5C_associated_SNPs_106207 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:148876100-148876140
64251 chr1 74665428 74665428 1 + C A LIHC 74665424 + 74665404 74665444 41 GAAAAACAGGAACTTGCTTACAACCAACAGCTGTCAGAAAA GAAAAACAGGAACTTGCTTACAACAAACAGCTGTCAGAAAA < 41bp 0.352184722226113 0.762066324044832 0.20163992 0.33222368 prediction 0.524132648089664 Functional Gain - FPGT;FPGT-TNNI3K ENSG00000116783;ENSG00000254685;ENSG00000259030 CDS Human other chr1:74665424 chr1:74665428 nonsynonymous SNV 0.993 0 25 hm5C_associated_SNPs_106208 0 0 1 UCHL5 POSTAR2 ENCODE chr1:74665398-74665520
64251 chr16 57417868 57417868 1 + C G rs2239350 57417867 + 57417847 57417887 41 ACAGACCCTGCCCTGTGGGCCCCCAAATGGAAATGGGCAGA ACAGACCCTGCCCTGTGGGCCGCCAAATGGAAATGGGCAGA < 41bp 0.481363475863812 0.762033851670205 0.040329486 0.59262973 prediction 0.52406770334041 Functional Gain - CX3CL1 ENSG00000006210 UTR3 Human protein_coding chr16:57417867 chr16:57417868 . . 0 22 hm5C_associated_SNPs_106211 0 0 4 DDX59 POSTAR2 ENCODE chr16:57417855-57417899
64251 chr12 120639200 120639200 1 + T G rs377204353 120639197 + 120639177 120639217 41 GAATTCGGAGTCCCGGTTCCCTGTGCCACCTGGCGAGCTCA GAATTCGGAGTCCCGGTTCCCTGGGCCACCTGGCGAGCTCA < 41bp 0.639607304545851 0.90163078342614 0.5363595 0.9090446 prediction 0.524046957760577 Functional Gain - PXN-AS1 ENSG00000255857 ncRNA_exonic Human antisense chr12:120639197 chr12:120639200 . . 0 24 hm5C_associated_SNPs_106216 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:120639180-120639200
64251 chr19 17581319 17581319 1 + C G rs527880623 17581318 + 17581298 17581338 41 GTGGGGCGGGGCTGGAGCGGCCCGCGGCCTCAGCTCTCTCT GTGGGGCGGGGCTGGAGCGGCGCGCGGCCTCAGCTCTCTCT < 41bp 0.553523508981394 0.815545714124415 0.4138887 0.71234345 prediction 0.524044410286042 Functional Gain - SLC27A1 ENSG00000130304 UTR5 Human protein_coding chr19:17581318 chr19:17581319 . . 0 22 hm5C_associated_SNPs_106217 0 0 4 NCBP2 POSTAR2 ENCODE chr19:17581307-17581469
64251 chr11 82868552 82868552 1 + C G STAD 82868548 + 82868528 82868568 41 AGGACGCCTGTCGGGATTATCAGTCATCGCTCGAAGACCTG AGGACGCCTGTCGGGATTATCAGTGATCGCTCGAAGACCTG < 41bp 0.484424922214769 0.761992883456977 0.4232905 0.8716812 prediction 0.523985766913954 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82868548 chr11:82868552 stopgain 0.998 0 25 hm5C_associated_SNPs_106219 0 0 15 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:82868537-82868558
64251 chr7 17378828 17378828 1 + T G COAD 17378826 + 17378806 17378846 41 CCTAGTTCCCTCCTGGCTGCCATGATGCAACAAGATGAGTC CCTAGTTCCCTCCTGGCTGCCAGGATGCAACAAGATGAGTC < 41bp 0.422963639320357 0.761965122339 0.021186769 0.16628456 prediction 0.523930244678 Functional Gain - AHR ENSG00000106546 CDS Human protein_coding chr7:17378826 chr7:17378828 nonsynonymous SNV 0.273 1 23 hm5C_associated_SNPs_106225 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:17378722-17378828
64251 chr17 57047012 57047012 1 + C T CESC 57047011 + 57046991 57047031 41 TAGTCCGCCAGGAGATGTTCCCCCATGATCCTGCTGAGGCC TAGTCCGCCAGGAGATGTTCCTCCATGATCCTGCTGAGGCC < 41bp 0.52377803430619 0.785742297032229 0.5572388 0.97994065 prediction 0.523928525452077 Functional Gain - PPM1E ENSG00000175175 CDS Human protein_coding chr17:57047011 chr17:57047012 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_106226 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:57047004-57047034
64251 chr21 46600256 46600256 1 + C A rs114027650 46600252 + 46600232 46600272 41 GCTTCCCACACAGGTTTTAGCTGACGCTGTCTCACGCCTGG GCTTCCCACACAGGTTTTAGCTGAAGCTGTCTCACGCCTGG < 41bp 0.363327924351645 0.76193097344787 0.40080163 0.5305933 prediction 0.52386194689574 Functional Gain - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46600252 chr21:46600256 nonsynonymous SNV 0.140 3 25 hm5C_associated_SNPs_106230 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:46600247-46600264
64251 chr11 67165577 67165577 1 + C G rs575670879 67165576 + 67165556 67165596 41 AGGGTTGCCCTGGCTGGGGCCCGGTGCCGAGACTCCCAAGC AGGGTTGCCCTGGCTGGGGCCGGGTGCCGAGACTCCCAAGC < 41bp 0.543771508866043 0.805680702986176 0.40061527 0.8843456 prediction 0.523818388240266 Functional Gain - RAD9A ENSG00000172613 UTR3 Human protein_coding chr11:67165576 chr11:67165577 . . 0 22 hm5C_associated_SNPs_106234 0 0 7 EIF3H POSTAR2 ENCODE chr11:67165533-67165594
64251 chr19 45567306 45567306 1 + C G LUAD 45567302 + 45567282 45567322 41 GTCCAGCTCAGAGTCCCGCTCCCGCTCCCGCTCCCCGACCC GTCCAGCTCAGAGTCCCGCTCCCGGTCCCGCTCCCCGACCC < 41bp 0.539438582863146 0.801326592360934 0.23758903 0.38636982 prediction 0.523776018995576 Functional Gain - CLASRP ENSG00000104859 CDS Human protein_coding chr19:45567302 chr19:45567306 synonymous SNV . 0 25 hm5C_associated_SNPs_106238 0 0 3 DDX24 POSTAR2 ENCODE chr19:45567272-45567316
64251 chr16 3714294 3714294 1 - A G UCEC 3714296 - 3714276 3714316 41 CACTCACCCTACTATGAGGCCATGAAGAAGAAAGACACAGA CACTCACCCTACTATGAGGCCACGAAGAAGAAAGACACAGA < 41bp 0.492327657870424 0.761816997080867 0.06343904 0.029789656 prediction 0.523633994161734 Functional Gain - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3714296 chr16:3714294 nonsynonymous SNV 0.983 2 23 hm5C_associated_SNPs_106246 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:3714280-3714300
64251 chr9 124080957 124080957 1 + T C LIHC 124080955 + 124080935 124080975 41 CTCCCCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCA CTCCCCAGGTCTCGGTCCTTCCCGAGGGCGGTGAGACCCCA < 41bp 0.488228077271966 0.761807585448199 0.21647856 0.38108432 prediction 0.523615170896398 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124080955 chr9:124080957 synonymous SNV . 0 23 hm5C_associated_SNPs_106251 0 0 7 BUD13 POSTAR2 ENCODE chr9:124080926-124080967
64251 chr16 29819173 29819173 1 + C A rs150303738 29819169 + 29819149 29819189 41 GGTGTGCACGGGGCCTCGGCCGCCCGCTAGGCCGTGGGGAG GGTGTGCACGGGGCCTCGGCCGCCAGCTAGGCCGTGGGGAG < 41bp 0.642742277942268 0.904530762017167 0.18400615 0.27612883 prediction 0.523576968149797 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29819169 chr16:29819173 nonsynonymous SNV 0.093 2 25 hm5C_associated_SNPs_106253 0 0 4 PRPF8 POSTAR2 ENCODE chr16:29819145-29819224
64251 chr20 61273845 61273845 1 + C A rs530768092 61273841 + 61273821 61273861 41 ATGAATGAAGCGGCGCGTGGCTGCCGGGGAGGCCAGAGCGT ATGAATGAAGCGGCGCGTGGCTGCAGGGGAGGCCAGAGCGT < 41bp 0.617791625110527 0.879577048056916 0.32068458 0.70635015 prediction 0.523570845892777 Functional Gain - SLCO4A1 ENSG00000101187 UTR5 Human protein_coding chr20:61273841 chr20:61273845 . . 0 25 hm5C_associated_SNPs_106254 0 0 5 DDX3X POSTAR2 ENCODE chr20:61273834-61273905
64251 chr14 76105721 76105721 1 + T C COAD 76105719 + 76105699 76105739 41 ACAACCCTGGTAGTCTATATCATGACACTGGTGGGCATGGT ACAACCCTGGTAGTCTATATCACGACACTGGTGGGCATGGT < 41bp 0.549951649294932 0.811721099142975 0.57564425 0.54961777 prediction 0.523538899696087 Functional Gain - FLVCR2 ENSG00000119686 CDS Human protein_coding chr14:76105719 chr14:76105721 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_106257 0 0 1 DGCR8 POSTAR2 ENCODE chr14:76105721-76105753
64251 chr18 21083604 21083604 1 + C G rs143953070 21083600 + 21083580 21083620 41 GCCATGGGCGAGGAGGACTACTATCTGGAGCTGTGCGAGCG GCCATGGGCGAGGAGGACTACTATGTGGAGCTGTGCGAGCG < 41bp 0.519214421860647 0.780982854747085 0.11117712 0.30320358 prediction 0.523536865772876 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21083600 chr18:21083604 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_106258 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr18:21083583-21083626
64251 chr2 71576384 71576384 1 + T G KIRP 71576382 + 71576362 71576402 41 AACAGAAGAAGGGGAAGCCTCATGGTAGCCGGTGGGATGAT AACAGAAGAAGGGGAAGCCTCAGGGTAGCCGGTGGGATGAT < 41bp 0.440215025186165 0.761755598273169 0.48027182 0.90089947 prediction 0.523511196546338 Functional Gain - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71576382 chr2:71576384 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_106260 0 0 14 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:71576373-71576395
64251 chr15 96877685 96877685 1 + C A CESC 96877681 + 96877661 96877701 41 GCCCCGCTCCTGGCCGCCGCCGGCCTGCATGCTTCGCCCAT GCCCCGCTCCTGGCCGCCGCCGGCATGCATGCTTCGCCCAT < 41bp 0.657909166064482 0.919629670794028 0.6161135 0.8915404 prediction 0.523441009459091 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877681 chr15:96877685 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_106264 0 0 3 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr15:96877684-96877685
64251 chr19 12921186 12921186 1 + T C rs7247284 12921184 + 12921164 12921204 41 TTCGTGGAGAAACTGCAGGACTTGGATACTGATTATGGCTC TTCGTGGAGAAACTGCAGGACTCGGATACTGATTATGGCTC < 41bp 0.508619513780624 0.770330516036291 0.24756059 0.27325714 prediction 0.523422004511335 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12921184 chr19:12921186 nonsynonymous SNV 0.003 1 23 hm5C_associated_SNPs_106266 2 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12921153-12921212
64251 chr17 8169597 8169597 1 + T C PAAD 8169595 + 8169575 8169615 41 GATGTCAGTGACGGAGGCCTCGTCACATGCCTGCTGGAGAT GATGTCAGTGACGGAGGCCTCGCCACATGCCTGCTGGAGAT < 41bp 0.537368450887634 0.79907620531287 0.33540922 0.92343384 prediction 0.523415508850474 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8169595 chr17:8169597 nonsynonymous SNV 0.616 0 23 hm5C_associated_SNPs_106267 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:8169597-8169598
64251 chr6 27806787 27806787 1 + C G HNSC 27806786 + 27806766 27806806 41 GCACGCGGTGTCGGAGGGCACCAAGGCCGTCACCAAGTACA GCACGCGGTGTCGGAGGGCACGAAGGCCGTCACCAAGTACA < 41bp 0.557965593368234 0.819617280179042 0.6584977 0.8359293 prediction 0.523303373621614 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806786 chr6:27806787 synonymous SNV . 0 22 hm5C_associated_SNPs_106272 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806780-27806820
64251 chr7 89874804 89874804 1 + C A rs17862129 89874800 + 89874780 89874820 41 ATCCGGCATCAGGAACAAGTCTAGCAGTTCCAGTCAAATCC ATCCGGCATCAGGAACAAGTCTAGAAGTTCCAGTCAAATCC < 41bp 0.649675582066999 0.911324150173281 0.2800237 0.2781483 prediction 0.523297136212564 Functional Gain - CFAP69 ENSG00000105792 CDS Human protein_coding chr7:89874800 chr7:89874804 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_106274 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:89874789-89874809
64251 chr17 30800908 30800908 1 + C T GBM 30800907 + 30800887 30800927 41 GGTTATGACTCCATCGACAGCCCCAAGGCCATCACATCTCT GGTTATGACTCCATCGACAGCTCCAAGGCCATCACATCTCT < 41bp 0.48295772761667 0.761640845611325 0.018376023 0.5617387 prediction 0.523281691222649 Functional Gain - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30800907 chr17:30800908 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_106275 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30800821-30800958
64251 chr17 644841 644841 1 + C A rs3744735 644837 + 644817 644857 41 CTGGGAGTCAGGCGCAGCCTCACACCAGCTGCCTCCTCCAC CTGGGAGTCAGGCGCAGCCTCACAACAGCTGCCTCCTCCAC < 41bp 0.36044886591042 0.761621762625091 0.13697061 0.09806919 prediction 0.523243525250183 Functional Gain - FAM57A ENSG00000167695 UTR3 Human protein_coding chr17:644837 chr17:644841 . . 0 25 hm5C_associated_SNPs_106277 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:644812-644850
64251 chr17 45286881 45286881 1 + T C UCEC 45286879 + 45286859 45286899 41 CACCAGCCCCTGCCCCAGCTCCTGAGGCTCCCAAGGAACCT CACCAGCCCCTGCCCCAGCTCCCGAGGCTCCCAAGGAACCT < 41bp 0.520697530193145 0.782272491579603 0.30251998 0.31640324 prediction 0.523149922772916 Functional Gain - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45286879 chr17:45286881 synonymous SNV . 0 23 hm5C_associated_SNPs_106281 0 0 1 DDX55 POSTAR2 ENCODE chr17:45286777-45286885
64251 chr4 187133384 187133384 1 + C A rs144839540 187133380 + 187133360 187133400 41 ATGGAACTCAGGGTGATGATCAGACGTGTCATTAGAACATG ATGGAACTCAGGGTGATGATCAGAAGTGTCATTAGAACATG < 41bp 0.421999028923163 0.761549205173283 0.9131375 0.8944566 prediction 0.523098410346565 Functional Gain - CYP4V2 ENSG00000164344 intronic Human protein_coding chr4:187133380 chr4:187133384 . . 0 25 hm5C_associated_SNPs_106283 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:187133356-187133387
64251 chr14 70171343 70171343 1 + T C UCEC 70171341 + 70171321 70171361 41 ATAAAGACACCCACACATCACTTGGGGTCCCCACGCTGTCT ATAAAGACACCCACACATCACTCGGGGTCCCCACGCTGTCT < 41bp 0.524079156746182 0.785603039361362 0.6437639 0.44523436 prediction 0.523047765230361 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70171341 chr14:70171343 synonymous SNV . 0 23 hm5C_associated_SNPs_106285 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:70171326-70171355
64251 chr16 81995714 81995714 1 + T G rs142941381 81995711 + 81995691 81995731 41 GATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAG GATAGAGGAGGACCGGTCTTCGGGCAAGGGTATACGAGTAG < 41bp 0.412918182539676 0.761519787621536 0.22686175 0.86385345 prediction 0.523039575243073 Functional Gain - PLCG2 ENSG00000260682 ncRNA_exonic Human misc_RNA chr16:81995711 chr16:81995714 . . 0 24 hm5C_associated_SNPs_106288 0 0 13 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:81995680-81995720
64251 chr15 22873512 22873512 1 + T G rs548126431 22873510 + 22873490 22873530 41 AAATACAAAATGTATCCAGACATGGTGGTGTGTACCTGTAG AAATACAAAATGTATCCAGACAGGGTGGTGTGTACCTGTAG < 41bp 0.455597220902549 0.76147070426451 0.2709379 0.73118067 prediction 0.52294140852902 Functional Gain - TUBGCP5 ENSG00000153575 UTR3 Human other chr15:22873510 chr15:22873512 . . 0 23 hm5C_associated_SNPs_106293 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:22873477-22873514
64251 chr22 39883511 39883511 1 + T G SKCM 39883508 + 39883488 39883528 41 GTGTCCAGCTTTTTCTGGAACAATGCCCCGGTCACGCCCCA GTGTCCAGCTTTTTCTGGAACAAGGCCCCGGTCACGCCCCA < 41bp 0.36425299571622 0.761453264867255 0.1300154 0.4568825 prediction 0.52290652973451 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883508 chr22:39883511 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_106295 0 0 1 METAP2 POSTAR2 ENCODE chr22:39883488-39883589
64251 chr5 135266048 135266048 1 + C G rs184869875 135266044 + 135266024 135266064 41 CGCGGACCCCCGTGCCTAGGCGCTCCTGTGCCTCCAGTGCG CGCGGACCCCCGTGCCTAGGCGCTGCTGTGCCTCCAGTGCG < 41bp 0.494762959804348 0.761452706149342 0.23222917 0.2823046 prediction 0.522905412298683 Functional Gain - FBXL21 ENSG00000145826 intronic Human protein_coding chr5:135266044 chr5:135266048 . . 0 25 hm5C_associated_SNPs_106296 0 0 2 NCBP2 POSTAR2 ENCODE chr5:135266038-135266123
64251 chr17 27061954 27061954 1 + C T THCA 27061953 + 27061933 27061973 41 AACATCCTGCTTGACAAACACCGCATGGTCGTCAAGATCGG AACATCCTGCTTGACAAACACTGCATGGTCGTCAAGATCGG < 41bp 0.510794498525073 0.772196095633876 0.30674273 0.8231033 prediction 0.522803194217605 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27061953 chr17:27061954 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_106301 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:27061948-27061976
64251 chr12 69991488 69991488 1 + T C LIHC 69991486 + 69991466 69991506 41 ATGAAGCAGAAAGATCATTGCATGATGCTCTTTGTGTTCTT ATGAAGCAGAAAGATCATTGCACGATGCTCTTTGTGTTCTT < 41bp 0.550415359552314 0.811805950702354 0.17254794 0.13324371 prediction 0.522781182300079 Functional Gain - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69991486 chr12:69991488 synonymous SNV . 0 23 hm5C_associated_SNPs_106306 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69991432-69991542
64251 chr12 120990388 120990388 1 + T G PRAD 120990385 + 120990365 120990405 41 CTGAACCACTTGTTGAATTTCACTTTTGAACCCCGTGGCCA CTGAACCACTTGTTGAATTTCACGTTTGAACCCCGTGGCCA < 41bp 0.372316986059628 0.76138071778909 0.08580193 0.08037579 prediction 0.522761435578179 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:120990385 chr12:120990388 synonymous SNV . 0 24 hm5C_associated_SNPs_106309 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:120990342-120990444
64251 chr12 132281832 132281832 1 + C G HNSC 132281831 + 132281811 132281851 41 GCAGCGCCCCGGCCCGCGGCCCCCGCGGCCCACTCGGCGCA GCAGCGCCCCGGCCCGCGGCCGCCGCGGCCCACTCGGCGCA < 41bp 0.574933552025789 0.83630920780506 0.07613781 0.18051824 prediction 0.522751311558542 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281831 chr12:132281832 nonsynonymous SNV 0.030 1 22 hm5C_associated_SNPs_106311 0 0 1 PPIG POSTAR2 ENCODE chr12:132281772-132281840
64251 chr16 69599904 69599904 1 + C A rs569067217 69599900 + 69599880 69599920 41 AGCGGCGGCGGCGGTGGCGGCGACCGTCAGTTTTCGCTGAG AGCGGCGGCGGCGGTGGCGGCGACAGTCAGTTTTCGCTGAG < 41bp 0.416370919367122 0.761359292735733 0.47886696 0.63975865 prediction 0.522718585471466 Functional Gain - NFAT5 ENSG00000102908 UTR5 Human protein_coding chr16:69599900 chr16:69599904 . . 0 25 hm5C_associated_SNPs_106313 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:69599900-69599920
64251 chr18 2913269 2913269 1 + T C LGG 2913267 + 2913247 2913287 41 GGGGGCCCGGGGGCATTCCACCTCATCGTGCACCTGAAGGC GGGGGCCCGGGGGCATTCCACCCCATCGTGCACCTGAAGGC < 41bp 0.516768610787016 0.778115754436234 0.119910836 0.22017491 prediction 0.522694287298436 Functional Gain - EMILIN2 ENSG00000132205 CDS Human protein_coding chr18:2913267 chr18:2913269 nonsynonymous SNV 0.442 4 23 hm5C_associated_SNPs_106315 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:2913237-2913274
64251 chr9 131846992 131846992 1 + T G HNSC 131846989 + 131846969 131847009 41 TGCCTACCTGAGCCTCAGCCCTGTATTTGTCATCGTCGGTT TGCCTACCTGAGCCTCAGCCCTGGATTTGTCATCGTCGGTT < 41bp 0.648657617002447 0.910003065253097 0.0966557 0.17422137 prediction 0.5226908965013 Functional Gain - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131846989 chr9:131846992 nonsynonymous SNV 0.920 1 24 hm5C_associated_SNPs_106316 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:131846965-131847000
64251 chr3 183858504 183858504 1 + C G BLCA 183858503 + 183858483 183858523 41 TCACCAACAGTGTCATTGGCCCCGGCTGCCACATTGGTGAG TCACCAACAGTGTCATTGGCCGCGGCTGCCACATTGGTGAG < 41bp 0.58463685237825 0.84597374124585 0.09667489 0.27455324 prediction 0.5226737777352 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858503 chr3:183858504 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_106317 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:183858494-183858509
64251 chr8 21882646 21882646 1 + C A rs149954729 21882642 + 21882622 21882662 41 CGCGAGCGACCCCTCAGTACCTGCCGATGCCTGCTGGTCTC CGCGAGCGACCCCTCAGTACCTGCAGATGCCTGCTGGTCTC < 41bp 0.541205608671344 0.802539213077326 0.06436947 0.7732538 prediction 0.522667208811964 Functional Gain - NPM2 ENSG00000158806 UTR5 Human protein_coding chr8:21882642 chr8:21882646 . . 0 25 hm5C_associated_SNPs_106318 0 0 2 EFTUD2 POSTAR2 ENCODE chr8:21882578-21882658
64251 chr4 77871016 77871016 1 + T G rs873090 77871014 + 77870994 77871034 41 CTAGCAGCAGCCGGAGTCGGCGTAAAGCACCCGGGCGCAGC CTAGCAGCAGCCGGAGTCGGCGGAAAGCACCCGGGCGCAGC < 41bp 0.598342464598945 0.859671307683284 0.85382795 0.90067476 prediction 0.522657686168676 Functional Gain - SEPT11 ENSG00000138758 UTR5 Human protein_coding chr4:77871014 chr4:77871016 . . 0 23 hm5C_associated_SNPs_106319 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:77871000-77871020
64251 chr12 53677280 53677280 1 + T C STAD 53677278 + 53677258 53677298 41 AGTGAAGCCAAGGCCTTTTGCTTGGAGGCCCTAAAACTTAC AGTGAAGCCAAGGCCTTTTGCTCGGAGGCCCTAAAACTTAC < 41bp 0.516577994808866 0.777906447444216 0.045870155 0.038759083 prediction 0.522656905270699 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53677278 chr12:53677280 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106320 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:53677278-53677307
64251 chr16 3705465 3705465 1 + C G rs77254040 3705464 + 3705444 3705484 41 AAGATCGCAGCCTTCAACATCCAGACATTTGGGGAGACCAA AAGATCGCAGCCTTCAACATCGAGACATTTGGGGAGACCAA < 41bp 0.44966940283 0.761327987626648 0.38552782 0.8881037 prediction 0.522655975253296 Functional Gain - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3705464 chr16:3705465 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_106321 0 0 1 PPIG POSTAR2 ENCODE chr16:3705449-3705520
64251 chr4 139966122 139966122 1 + C G KIRC 139966121 + 139966101 139966141 41 GCCATGACATTGAAAACCAACCAGGTGGCCATTGCACAGAC GCCATGACATTGAAAACCAACGAGGTGGCCATTGCACAGAC < 41bp 0.58890100764555 0.850226890361032 0.24442065 0.9013693 prediction 0.522651765430965 Functional Gain - NOCT ENSG00000151014 CDS Human protein_coding chr4:139966121 chr4:139966122 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_106323 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:139966083-139966145
64251 chr21 46595935 46595935 1 + C G OV 46595931 + 46595911 46595951 41 TCCCAGACTGGGCCCGTGCACGCGCCTTTGTTTGTCATGTC TCCCAGACTGGGCCCGTGCACGCGGCTTTGTTTGTCATGTC < 41bp 0.479563546911405 0.761324627085133 0.17946881 0.46132812 prediction 0.522649254170265 Functional Gain - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46595931 chr21:46595935 nonsynonymous SNV 0.278 4 25 hm5C_associated_SNPs_106324 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr21:46595929-46595950
64251 chr9 140136447 140136447 1 + T A LUAD 140136443 + 140136423 140136463 41 TGCGCTCGGGGCCCTTCGGGCAGATCTTCCGGCCGGACAAC TGCGCTCGGGGCCCTTCGGGCAGAACTTCCGGCCGGACAAC < 41bp 0.546843253378617 0.808154364850887 0.75268483 0.7000168 prediction 0.52262222294454 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140136443 chr9:140136447 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_106325 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr9:140136360-140136460
64251 chr21 47660784 47660784 1 + C T SKCM 47660783 + 47660763 47660803 41 CAAACACTGCGCCAAGAGCTCCTCAGCAGAAGCTCCTCGCA CAAACACTGCGCCAAGAGCTCTTCAGCAGAAGCTCCTCGCA < 41bp 0.495769624696701 0.761307545709262 0.118138015 0.13071012 prediction 0.522615091418524 Functional Gain - MCM3AP ENSG00000160294 CDS Human protein_coding chr21:47660783 chr21:47660784 synonymous SNV . 0 22 hm5C_associated_SNPs_106326 0 0 1 DDX3X POSTAR2 ENCODE chr21:47660747-47660810
64251 chr7 150747925 150747925 1 + C G LUSC 150747924 + 150747904 150747944 41 TGAGCCAGAGCCCTCTGATCCCCTAGGCTCCCCCAGCCCCA TGAGCCAGAGCCCTCTGATCCGCTAGGCTCCCCCAGCCCCA < 41bp 0.445510589263852 0.761265102580575 0.33811504 0.34312242 prediction 0.52253020516115 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150747924 chr7:150747925 synonymous SNV . 0 22 hm5C_associated_SNPs_106332 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:150747877-150747932
64251 chr1 171755160 171755160 1 + C G SARC 171755156 + 171755136 171755176 41 ATGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGCTAGA ATGAAAGCATGGACCACATCCAAGGTGAGCTGTCGGCTAGA < 41bp 0.545581950971579 0.806846444616912 0.33457124 0.79015243 prediction 0.522528987290666 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171755156 chr1:171755160 nonsynonymous SNV 0.062 1 25 hm5C_associated_SNPs_106333 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr1:171755142-171755164
64251 chr10 11894124 11894124 1 + C G COAD 11894120 + 11894100 11894140 41 AGACGCATCTGACATGAACTCAGACACGTCCCCCAGCTGCA AGACGCATCTGACATGAACTCAGAGACGTCCCCCAGCTGCA < 41bp 0.471509906089062 0.761243706017311 0.5926588 0.8958478 prediction 0.522487412034621 Functional Gain - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11894120 chr10:11894124 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_106336 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:11894037-11894140
64251 chrX 47035947 47035947 1 + C T SARC 47035946 + 47035926 47035966 41 GTGTCGATGCACTACAGTGACCCCAAGCCCAAGATCAATGA GTGTCGATGCACTACAGTGACTCCAAGCCCAAGATCAATGA < 41bp 0.529404592810056 0.790645433388734 0.15563595 0.9533839 prediction 0.522481681157356 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47035946 chrX:47035947 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_106337 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:47035923-47035947
64251 chr1 153963264 153963264 1 + C A rs71626798 153963260 + 153963240 153963280 41 TTTCCGGCGGTGACGACCTACGCACACGAGAACATGCCTGT TTTCCGGCGGTGACGACCTACGCAAACGAGAACATGCCTGT < 41bp 0.439877589582953 0.761210648800155 0.02899295 0.05455786 prediction 0.522421297600311 Functional Gain - RPS27 ENSG00000177954 UTR5 Human protein_coding chr1:153963260 chr1:153963264 . . 0 25 hm5C_associated_SNPs_106339 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:153963243-153963269
64251 chr5 169129394 169129394 1 + T C COAD 169129392 + 169129372 169129412 41 ACACAGAGGAATGTGGAAGTCATCATGTGTGTGTGCGCGGA ACACAGAGGAATGTGGAAGTCACCATGTGTGTGTGCGCGGA < 41bp 0.51457451952151 0.775767653328084 0.10481945 0.13286579 prediction 0.522386267613148 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169129392 chr5:169129394 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_106340 0 0 1 DDX24 POSTAR2 ENCODE chr5:169129367-169129425
64251 chrX 38663490 38663490 1 + C A rs780738920 38663486 + 38663466 38663506 41 ACCAGGGGTGGCCCTGAGCGCCGGCGACACCTTTCCTGGAC ACCAGGGGTGGCCCTGAGCGCCGGAGACACCTTTCCTGGAC < 41bp 0.615096981465642 0.876255401036513 0.86169326 0.89952505 prediction 0.522316839141741 Functional Gain - MID1IP1 ENSG00000165175 UTR5 Human protein_coding chrX:38663486 chrX:38663490 . . 0 25 hm5C_associated_SNPs_106345 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:38663468-38663493
64251 chr12 65639551 65639551 1 + T C STAD 65639549 + 65639529 65639569 41 TTGCAGTAGACAAAAATTCACGTGAGGTAAAGTAACTTTTG TTGCAGTAGACAAAAATTCACGCGAGGTAAAGTAACTTTTG < 41bp 0.493771692023458 0.76115330028965 0.21708554 0.16007265 prediction 0.5223066005793 Functional Gain - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65639549 chr12:65639551 synonymous SNV . 0 23 hm5C_associated_SNPs_106346 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:65639458-65639566
64251 chr1 26153118 26153118 1 + C A LAML 26153114 + 26153094 26153134 41 TCCCTGGTCCAGGAGTGATACGCGCCCCCTGAGGCACACCT TCCCTGGTCCAGGAGTGATACGCGACCCCTGAGGCACACCT < 41bp 0.539627848145214 0.800771100177188 0.10318351 0.21576342 prediction 0.522286504063947 Functional Gain - MTFR1L ENSG00000117640 CDS Human protein_coding chr1:26153114 chr1:26153118 synonymous SNV . 0 25 hm5C_associated_SNPs_106347 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:26153110-26153136
64251 chr5 108281869 108281869 1 + T C UCEC 108281867 + 108281847 108281887 41 TATCCAAATTTGAATCTATTCGTCATTCAATTGCTGGAATA TATCCAAATTTGAATCTATTCGCCATTCAATTGCTGGAATA < 41bp 0.535526986807159 0.796628718262433 0.010153055 0.040229708 prediction 0.522203462910547 Functional Gain - FER ENSG00000151422 CDS Human protein_coding chr5:108281867 chr5:108281869 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_106349 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr5:108281865-108281886
64251 chrX 23685758 23685758 1 + C A LUSC 23685754 + 23685734 23685774 41 GCCACCGAAGGCTGCTTCTGCTGCCGCTACTGCTGTTCCTG GCCACCGAAGGCTGCTTCTGCTGCAGCTACTGCTGTTCCTG < 41bp 0.650928626126747 0.91202769061321 0.5237791 0.45665392 prediction 0.522198128972925 Functional Gain - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685754 chrX:23685758 nonsynonymous SNV 0.938 0 25 hm5C_associated_SNPs_106350 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:23685620-23685780
64251 chr16 90238115 90238115 1 + C A rs150056384 90238111 + 90238091 90238131 41 CAGGCGCAGAACTTGATCTCCAGGCGGCCTTTGCAGGCCCG CAGGCGCAGAACTTGATCTCCAGGAGGCCTTTGCAGGCCCG < 41bp 0.621111261865212 0.882147774926268 0.932121 0.9108453 prediction 0.522073026122111 Functional Gain - FAM157C ENSG00000260528 ncRNA_intronic Human lincRNA chr16:90238111 chr16:90238115 . . 0 25 hm5C_associated_SNPs_106356 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:90238090-90238134
64251 chr8 31014958 31014958 1 + C G SARC 31014954 + 31014934 31014974 41 CTTATCCCAAGCGGTGAAAGCTGGCTGCCCCCTTGATTTGG CTTATCCCAAGCGGTGAAAGCTGGGTGCCCCCTTGATTTGG < 41bp 0.535079529286789 0.796075771098277 0.352589 0.86343086 prediction 0.521992483622975 Functional Gain - WRN ENSG00000165392 CDS Human protein_coding chr8:31014954 chr8:31014958 synonymous SNV . 0 25 hm5C_associated_SNPs_106361 0 0 1 FMR1 POSTAR2 ENCODE chr8:31014948-31015003
64251 chr2 36669816 36669816 1 + C G rs140450317 36669815 + 36669795 36669835 41 TGTTCAGCAGACCGCGTGTCCCCCGGACAGCTATGAAACTC TGTTCAGCAGACCGCGTGTCCGCCGGACAGCTATGAAACTC < 41bp 0.465691371565333 0.760987149334411 0.15250865 0.2523335 prediction 0.521974298668822 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36669815 chr2:36669816 synonymous SNV . 0 22 hm5C_associated_SNPs_106362 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:36669797-36669838
64251 chr10 98744039 98744039 1 + T G SKCM 98744036 + 98744016 98744056 41 CAAGTGGAGCCAGAAGATGGCAGTGATGTCAGCCCCGGCCC CAAGTGGAGCCAGAAGATGGCAGGGATGTCAGCCCCGGCCC < 41bp 0.654660652388474 0.915624352727648 0.1836744 0.91127634 prediction 0.521927400678347 Functional Gain - LCOR ENSG00000155640 CDS Human other chr10:98744036 chr10:98744039 nonsynonymous SNV 0.784 0 24 hm5C_associated_SNPs_106367 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:98744039-98744040
64251 chr16 88875283 88875283 1 + C A rs186930018 88875279 + 88875259 88875299 41 CCGGGTGTGGTGGTGGGCACCTGTCGTCCCAGCTACTAGGG CCGGGTGTGGTGGTGGGCACCTGTAGTCCCAGCTACTAGGG < 41bp 0.395221195862043 0.760955950297193 0.37740162 0.6218679 prediction 0.521911900594386 Functional Gain - CDT1 ENSG00000167513 UTR3 Human protein_coding chr16:88875279 chr16:88875283 . . 0 25 hm5C_associated_SNPs_106368 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88875255-88875309
64251 chr16 2881822 2881822 1 + T A LUAD 2881818 + 2881798 2881838 41 GTCCAGGTGAAACTTGGAGACTCCTGGGACGTGAAACTGGG GTCCAGGTGAAACTTGGAGACTCCAGGGACGTGAAACTGGG < 41bp 0.593426775508099 0.854314049002328 0.63428915 0.9635655 prediction 0.521774546988459 Functional Gain - ZG16B ENSG00000162078 CDS Human protein_coding chr16:2881818 chr16:2881822 nonsynonymous SNV 0.002 3 25 hm5C_associated_SNPs_106374 0 0 1 SND1 POSTAR2 ENCODE chr16:2881819-2881885
64251 chrX 152772005 152772005 1 + T G SKCM 152772002 + 152771982 152772022 41 CCTAGAGATGGGCGGGAACCCACTGGAGAACAGTGGCTTTG CCTAGAGATGGGCGGGAACCCACGGGAGAACAGTGGCTTTG < 41bp 0.649119718842054 0.909998400166143 0.46825704 0.8764752 prediction 0.521757362648179 Functional Gain - BGN ENSG00000182492 CDS Human protein_coding chrX:152772002 chrX:152772005 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_106375 0 0 1 SND1 POSTAR2 ENCODE chrX:152771985-152772035
64251 chr3 14175262 14175262 1 + T C rs2340917 14175260 + 14175240 14175280 41 GCCATGGCAGTGGAGTCATTCATGGCAACAGCCCCCTTTGT GCCATGGCAGTGGAGTCATTCACGGCAACAGCCCCCTTTGT < 41bp 0.517027799568428 0.777888648142029 0.54293823 0.39245608 prediction 0.521721697147203 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14175260 chr3:14175262 nonsynonymous SNV 0.297 0 23 hm5C_associated_SNPs_106379 3 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:14175253-14175277
64251 chr19 1924122 1924122 1 + C G BLCA 1924121 + 1924101 1924141 41 TTGCAGGTGCACAGGATCTACCGAGGGGCTGGCGGAAGCTT TTGCAGGTGCACAGGATCTACGGAGGGGCTGGCGGAAGCTT < 41bp 0.445853599631673 0.760856924208996 0.90901816 0.8406442 prediction 0.521713848417992 Functional Gain - SCAMP4 ENSG00000227500 CDS Human protein_coding chr19:1924121 chr19:1924122 nonsynonymous SNV 0.928 3 22 hm5C_associated_SNPs_106380 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:1924112-1924142
64251 chr1 110168300 110168300 1 + C A LUAD 110168296 + 110168276 110168316 41 CCCCCCAGGAGCTGTTCACCCGCTCACTGGCTGAGAGCGAG CCCCCCAGGAGCTGTTCACCCGCTAACTGGCTGAGAGCGAG < 41bp 0.350629148486147 0.760841739576231 0.129002 0.15312025 prediction 0.521683479152461 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168296 chr1:110168300 stopgain 0.978 0 25 hm5C_associated_SNPs_106382 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr1:110168292-110168322
64251 chr16 87636771 87636771 1 + T A SKCM 87636767 + 87636747 87636787 41 ACATGCATGTCCAGTGGGGGCAGGTTTAATTTTGACGACGG ACATGCATGTCCAGTGGGGGCAGGATTAATTTTGACGACGG < 41bp 0.557603245311689 0.818438461378697 0.7728616 0.8216342 prediction 0.521670432134015 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87636767 chr16:87636771 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_106385 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:87636766-87636798
64251 chr11 82612842 82612842 1 + C G rs3763814 82612841 + 82612821 82612861 41 GTCACTGTGCGTCGCCTGGGCCCGTTCCTGGTCTTCTCCCC GTCACTGTGCGTCGCCTGGGCGCGTTCCTGGTCTTCTCCCC < 41bp 0.487475519929099 0.760813469516275 0.050621897 0.15050802 prediction 0.52162693903255 Functional Gain - DDIAS ENSG00000165490 UTR5 Human protein_coding chr11:82612841 chr11:82612842 . . 0 22 hm5C_associated_SNPs_106388 0 0 1 DDX3X POSTAR2 ENCODE chr11:82612792-82612870
64251 chr11 63960739 63960739 1 + C G BRCA 63960735 + 63960715 63960755 41 GAGGATGGCTGCAAGACTGTCGACCTAAAGCCTGACTGGGG GAGGATGGCTGCAAGACTGTCGACGTAAAGCCTGACTGGGG < 41bp 0.474431300495655 0.76080925083267 0.2904424 0.4567626 prediction 0.52161850166534 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63960735 chr11:63960739 nonsynonymous SNV 0.219 1 25 hm5C_associated_SNPs_106391 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:63960692-63960739
64251 chr4 122725881 122725881 1 + T C UCEC 122725879 + 122725859 122725899 41 CCTTATGTCATTTCCGAAGACCTGATGTCTCTGTCCAAGGA CCTTATGTCATTTCCGAAGACCCGATGTCTCTGTCCAAGGA < 41bp 0.555513570931503 0.816296379629365 0.09862745 0.11739108 prediction 0.521565617395724 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122725879 chr4:122725881 synonymous SNV . 0 23 hm5C_associated_SNPs_106395 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:122725874-122725898
64251 chr9 4664516 4664516 1 + C G rs184013366 4664515 + 4664495 4664535 41 CTGTTCATCCATGGTGCCTCCCCAAATCATAAGACCAAAGA CTGTTCATCCATGGTGCCTCCGCAAATCATAAGACCAAAGA < 41bp 0.526149998167019 0.78693139986588 0.013239771 0.02694267 prediction 0.521562803397722 Functional Gain - PLPP6 ENSG00000205808 UTR3 Human protein_coding chr9:4664515 chr9:4664516 . . 0 22 hm5C_associated_SNPs_106396 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:4664491-4664517
64251 chr21 15399772 15399772 1 + C G rs562526263 15399771 + 15399751 15399791 41 CGGCCTTTGTCTCACTTCAGCCAGAGAGCGGGGTTAGGGCT CGGCCTTTGTCTCACTTCAGCGAGAGAGCGGGGTTAGGGCT < 41bp 0.573209405387228 0.833978159659013 0.1844325 0.88630414 prediction 0.52153750854357 Functional Gain - ANKRD20A11P;LIPI ENSG00000224905 ncRNA_exonic Human antisense chr21:15399771 chr21:15399772 . . 0 22 hm5C_associated_SNPs_106398 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:15399768-15399791
64251 chr1 3649657 3649657 1 + C A rs187293482 3649653 + 3649633 3649673 41 AGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCGCCACC AGATCCACTGAGGGCCTCGCCTGGATGCAGCCTGCGCCACC < 41bp 0.623835574366371 0.884581901433941 0.78462917 0.9081341 prediction 0.521492654135141 Functional Gain - TP73 ENSG00000078900 UTR3 Human protein_coding chr1:3649653 chr1:3649657 . . 0 25 hm5C_associated_SNPs_106402 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:3649651-3649679
64251 chr12 56532009 56532009 1 + C A rs35075600 56532005 + 56531985 56532025 41 GTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGTCTCAC GTCCCATCTGGCCGCCTGCACTTGAGCCTGGAGCGTCTCAC < 41bp 0.342502443285442 0.760740652010985 0.28947395 0.37590447 prediction 0.521481304021969 Functional Gain - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56532005 chr12:56532009 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106403 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:56532000-56532020
64251 chr4 41984468 41984468 1 + C G BLCA 41984464 + 41984444 41984484 41 GCGTGGCGACGGGACACCAGCAGTCATTTGATACCAGCAGT GCGTGGCGACGGGACACCAGCAGTGATTTGATACCAGCAGT < 41bp 0.481021632836141 0.760740487514866 0.19832474 0.34096542 prediction 0.521480975029732 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984464 chr4:41984468 stopgain 0.511 0 25 hm5C_associated_SNPs_106404 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:41984450-41984486
64251 chr6 155153514 155153514 1 + C A COAD 155153510 + 155153490 155153530 41 TTCGTCCGGGACTAATACCACAGGCACCTGGGCCAAGATTC TTCGTCCGGGACTAATACCACAGGAACCTGGGCCAAGATTC < 41bp 0.356521894070068 0.76072759222855 0.58023417 0.63394153 prediction 0.5214551844571 Functional Gain - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155153510 chr6:155153514 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_106407 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:155153449-155153516
64251 chr5 140589987 140589987 1 + T G OV 140589985 + 140589965 140590005 41 CCGCACCTGCCCCTCGCCTCCCTGGTCTCCATCAACGCGGA CCGCACCTGCCCCTCGCCTCCCGGGTCTCCATCAACGCGGA < 41bp 0.412402477787202 0.760709006524877 0.010550916 0.1805681 prediction 0.521418013049754 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589985 chr5:140589987 nonsynonymous SNV 0.000 3 23 hm5C_associated_SNPs_106410 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr12 654081 654081 1 + C T SKCM 654080 + 654060 654100 41 CTGAGGAAGCTTGCTGTGTCCCCCAAATGGACCAACTATGG CTGAGGAAGCTTGCTGTGTCCTCCAAATGGACCAACTATGG < 41bp 0.49831573255145 0.760697079226745 0.0327453 0.9383458 prediction 0.521394158453491 Functional Gain - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:654080 chr12:654081 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_106411 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:654069-654107
64251 chr12 57911175 57911175 1 + T G SKCM 57911172 + 57911152 57911192 41 AGTGTCCCGAAGGAGAAAGGCAATGACTCAGCTGCCATCTC AGTGTCCCGAAGGAGAAAGGCAAGGACTCAGCTGCCATCTC < 41bp 0.366038282314542 0.76066875718305 0.23143518 0.87468493 prediction 0.5213375143661 Functional Gain - DDIT3 ENSG00000175197 CDS Human protein_coding chr12:57911172 chr12:57911175 synonymous SNV . 0 24 hm5C_associated_SNPs_106416 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:57911158-57911217
64251 chr16 53878098 53878098 1 + T A LIHC 53878094 + 53878074 53878114 41 AGAGGAAAGTGAGGATGACTCTCATCTCGAAGGCAGGGATC AGAGGAAAGTGAGGATGACTCTCAACTCGAAGGCAGGGATC < 41bp 0.441156621521089 0.760653218726062 0.010984808 0.035553634 prediction 0.521306437452123 Functional Gain - FTO ENSG00000140718 CDS Human protein_coding chr16:53878094 chr16:53878098 nonsynonymous SNV 0.101 0 25 hm5C_associated_SNPs_106417 1 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:53878090-53878117
64251 chr14 57858194 57858194 1 + C G rs45583845 57858193 + 57858173 57858213 41 CAATGGACTGGCCGAGGGCACCGAGCAGGAGGAGGAGGAGG CAATGGACTGGCCGAGGGCACGGAGCAGGAGGAGGAGGAGG < 41bp 0.578794223997774 0.839440239663501 0.47881705 0.8944807 prediction 0.521292031331453 Functional Gain - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57858193 chr14:57858194 synonymous SNV . 0 22 hm5C_associated_SNPs_106418 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:57858172-57858195
64251 chr1 1458897 1458897 1 + C A UCEC 1458893 + 1458873 1458913 41 CCCCTTCCCCTCCGGCAGGTCAGCCGGCGGCTCCTCAGTCG CCCCTTCCCCTCCGGCAGGTCAGCAGGCGGCTCCTCAGTCG < 41bp 0.656048079730066 0.916688983893224 0.6921683 0.75150836 prediction 0.521281808326317 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1458893 chr1:1458897 synonymous SNV . 0 25 hm5C_associated_SNPs_106419 0 0 2 SF3B4 POSTAR2 ENCODE chr1:1458819-1458897
64251 chr2 175265765 175265765 1 + T G COAD 175265763 + 175265743 175265783 41 GCTGAAAAAGCCCTCAATGTCATTGTTGACTTACTAGAAAA GCTGAAAAAGCCCTCAATGTCAGTGTTGACTTACTAGAAAA < 41bp 0.436029733145705 0.760640625148643 0.07215834 0.27238938 prediction 0.521281250297285 Functional Gain - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175265763 chr2:175265765 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_106420 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:175265730-175265767
64251 chr10 99512859 99512859 1 + T C COAD 99512857 + 99512837 99512877 41 GCCCTGCAGGACAACGGGTTCCTGAGCAAGAATGAGGTGCT GCCCTGCAGGACAACGGGTTCCCGAGCAAGAATGAGGTGCT < 41bp 0.497892537473271 0.760624060527295 0.24161655 0.3255493 prediction 0.521248121054589 Functional Gain - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99512857 chr10:99512859 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_106421 0 0 11 EIF3G POSTAR2 GSE65004,GSM1585675 chr10:99512828-99512866
64251 chr1 28661116 28661116 1 + C A STAD 28661112 + 28661092 28661132 41 GGGGCACCCTGGCATCTGCGCTACCTGGGACAGCCAGAAAT GGGGCACCCTGGCATCTGCGCTACATGGGACAGCCAGAAAT < 41bp 0.353590546350936 0.760622148594646 0.31619287 0.5842489 prediction 0.521244297189292 Functional Gain - MED18 ENSG00000130772 CDS Human protein_coding chr1:28661112 chr1:28661116 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106423 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:28661103-28661124
64251 chr11 65633313 65633313 1 + C T SKCM 65633312 + 65633292 65633332 41 GCCTATGATGCCTGTGCCACCCCCAAGGAACAAGAGACACT GCCTATGATGCCTGTGCCACCTCCAAGGAACAAGAGACACT < 41bp 0.512176756588906 0.772772199112642 0.030586362 0.95078516 prediction 0.521190885047473 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65633312 chr11:65633313 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_106426 0 0 7 DDX24 POSTAR2 ENCODE chr11:65633291-65633365
64251 chr14 69927515 69927515 1 + T G rs577142821 69927512 + 69927492 69927532 41 GCCCTCTTAGCTCTCAGAAGCTATGTATGGGCTTTCCCAGA GCCCTCTTAGCTCTCAGAAGCTAGGTATGGGCTTTCCCAGA < 41bp 0.418409518374593 0.76058843537142 0.015565932 0.101346076 prediction 0.52117687074284 Functional Gain - SLC39A9 ENSG00000029364 UTR3 Human protein_coding chr14:69927512 chr14:69927515 . . 0 24 hm5C_associated_SNPs_106428 0 0 9 ZC3H7B POSTAR2 GSE38201,GSM936510 chr14:69927508-69927531
64251 chr3 196387128 196387128 1 + C G UCEC 196387124 + 196387104 196387144 41 AGGGCGGCGCTTTCGACGGCCTGGCTGAGCTGAGGCACCTC AGGGCGGCGCTTTCGACGGCCTGGGTGAGCTGAGGCACCTC < 41bp 0.571704708537677 0.832291207308919 0.37930733 0.8783421 prediction 0.521172997542484 Functional Gain - NRROS ENSG00000174004 CDS Human protein_coding chr3:196387124 chr3:196387128 nonsynonymous SNV 0.058 0 25 hm5C_associated_SNPs_106429 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr3:196387113-196387131
64251 chr17 57287460 57287460 1 + C G rs375060156 57287456 + 57287436 57287476 41 AGACCTTCTAATGGGAGCATCAGCCTGGATGGGCTCTGAAA AGACCTTCTAATGGGAGCATCAGCGTGGATGGGCTCTGAAA < 41bp 0.53741797969405 0.797996636952401 0.2762453 0.7917366 prediction 0.521157314516702 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287456 chr17:57287460 synonymous SNV . 0 25 hm5C_associated_SNPs_106430 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:57287460-57287480
64251 chr14 24885022 24885022 1 + C A LUSC 24885018 + 24884998 24885038 41 ACACGCCAACCTATGCCCACCTGGCAGCCGTGGCCTGCGGC ACACGCCAACCTATGCCCACCTGGAAGCCGTGGCCTGCGGC < 41bp 0.358271003073079 0.760554672530855 0.19725096 0.33959648 prediction 0.521109345061711 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24885018 chr14:24885022 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_106431 0 0 1 PCBP2 POSTAR2 ENCODE chr14:24884962-24885029
64251 chr4 39776523 39776523 1 + T A COAD 39776519 + 39776499 39776539 41 ACTATTGGCAGCTGCAGAGCCAGATGATCCACAGGATGCTG ACTATTGGCAGCTGCAGAGCCAGAAGATCCACAGGATGCTG < 41bp 0.580978369926935 0.841506072052415 0.9025941 0.6854531 prediction 0.521055404250959 Functional Gain - UBE2K ENSG00000078140 CDS Human protein_coding chr4:39776519 chr4:39776523 stoploss 0.979 2 25 hm5C_associated_SNPs_106434 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:39776475-39776543
64251 chr2 73476181 73476181 1 + T C LUSC 73476179 + 73476159 73476199 41 ATGACAAGTTAGAGAAGATCCATCATTCTGGAGCCAAAGTT ATGACAAGTTAGAGAAGATCCACCATTCTGGAGCCAAAGTT < 41bp 0.566314769807159 0.826842451684544 0.050397217 0.040304333 prediction 0.521055363754772 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476179 chr2:73476181 synonymous SNV . 0 23 hm5C_associated_SNPs_106435 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476116-73476315
64251 chr1 33292001 33292001 1 + T G COAD 33291999 + 33291979 33292019 41 TACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAG TACTCCCCGAGAGAAAAATTCAGCGTACAGCCTGGGACCAG < 41bp 0.429268333997975 0.760514125642798 0.35946727 0.7473178 prediction 0.521028251285596 Functional Gain - S100PBP ENSG00000116497 CDS Human protein_coding chr1:33291999 chr1:33292001 nonsynonymous SNV 0.781 0 23 hm5C_associated_SNPs_106438 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr1:33291991-33292019
64251 chr2 75081509 75081509 1 + T C COAD 75081507 + 75081487 75081527 41 GCAAGGAGATGGAGAAAGGGCTTGGAGCCACCACTCACCCT GCAAGGAGATGGAGAAAGGGCTCGGAGCCACCACTCACCCT < 41bp 0.521129402877486 0.78164327923846 0.025935352 0.06791592 prediction 0.521027752721949 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75081507 chr2:75081509 synonymous SNV . 0 23 hm5C_associated_SNPs_106439 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:75081506-75081531
64251 chr9 123911018 123911018 1 + T A LAML 123911014 + 123910994 123911034 41 CCTTAAGTACTCAGCCTCAACTCCTGTTAGAAAACCACGCC CCTTAAGTACTCAGCCTCAACTCCAGTTAGAAAACCACGCC < 41bp 0.609968183666801 0.870468130232707 0.17632797 0.8939522 prediction 0.520999893131811 Functional Gain - CNTRL ENSG00000119397 CDS Human protein_coding chr9:123911014 chr9:123911018 synonymous SNV . 0 25 hm5C_associated_SNPs_106440 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:123910993-123911019
64251 chrX 110968219 110968219 1 + C A UCEC 110968215 + 110968195 110968235 41 TACCCAAGTGATGTCTGTTCCTGCCTGGAATGCTATGCCCA TACCCAAGTGATGTCTGTTCCTGCATGGAATGCTATGCCCA < 41bp 0.356453993312435 0.760487806608119 0.12009823 0.64557964 prediction 0.520975613216239 Functional Gain - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110968215 chrX:110968219 synonymous SNV . 0 25 hm5C_associated_SNPs_106443 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:110968185-110968229
64251 chr8 74209456 74209456 1 + C T SKCM 74209455 + 74209435 74209475 41 ATGGTGAGGAAGAAATTCTGCCCCACTGTAACTTGCAGGTT ATGGTGAGGAAGAAATTCTGCTCCACTGTAACTTGCAGGTT < 41bp 0.504658885688637 0.765142330107205 0.1499139 0.18547168 prediction 0.520966888837136 Functional Gain - RDH10 ENSG00000121039 CDS Human protein_coding chr8:74209455 chr8:74209456 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_106445 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:74209432-74209470
64251 chr6 44364085 44364085 1 + T G rs549324401 44364083 + 44364063 44364103 41 TTTTAATTTTTGCAGATGAACTTGAGATGCTTTCTGAAGCC TTTTAATTTTTGCAGATGAACTGGAGATGCTTTCTGAAGCC < 41bp 0.593946985092705 0.854428305375401 0.29432845 0.5898278 prediction 0.520962640565392 Functional Gain - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44364083 chr6:44364085 synonymous SNV . 0 23 hm5C_associated_SNPs_106446 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:44364080-44364100
64251 chr17 48761062 48761062 1 + C G rs41280128 48761061 + 48761041 48761081 41 ATTATTCTGTGCGCTACCGGCCGGGCCTAGACCTGGTGCTG ATTATTCTGTGCGCTACCGGCGGGGCCTAGACCTGGTGCTG < 41bp 0.443260713534954 0.760467468688252 0.8770642 0.9019468 prediction 0.520934937376504 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48761061 chr17:48761062 nonsynonymous SNV 0.792 2 22 hm5C_associated_SNPs_106448 0 0 3 LSM11 POSTAR2 ENCODE chr17:48761048-48761118
64251 chr12 57619127 57619127 1 + C A BLCA 57619123 + 57619103 57619143 41 GGCTGCCCGGGCCTGTCCCCCACCCTCTGCAGTCTACGCTC GGCTGCCCGGGCCTGTCCCCCACCATCTGCAGTCTACGCTC < 41bp 0.575798846970011 0.836265890805814 0.37217808 0.16306245 prediction 0.520934087671606 Functional Gain - NXPH4 ENSG00000182379 CDS Human protein_coding chr12:57619123 chr12:57619127 nonsynonymous SNV 0.183 1 25 hm5C_associated_SNPs_106449 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:57619087-57619134
64251 chr15 50526114 50526114 1 + T C rs34984126 50526112 + 50526092 50526132 41 CCATCAAAATGAAAGAAAACCATGAATTTGATGGAAAGAAA CCATCAAAATGAAAGAAAACCACGAATTTGATGGAAAGAAA < 41bp 0.485131842985556 0.760419267419057 0.094872475 0.04834208 prediction 0.520838534838113 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50526112 chr15:50526114 synonymous SNV . 0 23 hm5C_associated_SNPs_106458 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:50526102-50526127
64251 chr9 139252760 139252760 1 + C G rs549254673 139252759 + 139252739 139252779 41 ACGTCCTCCCGAGGCCATTGCCGAGGACAGGCACTGGGCAT ACGTCCTCCCGAGGCCATTGCGGAGGACAGGCACTGGGCAT < 41bp 0.564675350261867 0.825087217613708 0.8918845 0.92245746 prediction 0.520823734703682 Functional Gain - GPSM1 ENSG00000160360 UTR3 Human protein_coding chr9:139252759 chr9:139252760 . . 0 22 hm5C_associated_SNPs_106459 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139252730-139252780
64251 chr8 38854608 38854608 1 + C A CESC 38854604 + 38854584 38854624 41 TGGGGTCTGGCGCGCGCTTTCCCTCGGGGACCCTTCGTGTC TGGGGTCTGGCGCGCGCTTTCCCTAGGGGACCCTTCGTGTC < 41bp 0.379392838026359 0.760372894939575 0.029551923 0.0809938 prediction 0.52074578987915 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38854604 chr8:38854608 stopgain 0.000 0 25 hm5C_associated_SNPs_106464 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:38854587-38854609
64251 chr12 69995145 69995145 1 + C G OV 69995141 + 69995121 69995161 41 GTCGATCTTTGGACCAGTTTCTAGCAAAGTTGTGTTTGAAA GTCGATCTTTGGACCAGTTTCTAGGAAAGTTGTGTTTGAAA < 41bp 0.532854548375261 0.793226237731448 0.20682937 0.76770365 prediction 0.520743378712374 Functional Gain - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69995141 chr12:69995145 nonsynonymous SNV 0.761 1 25 hm5C_associated_SNPs_106465 0 0 36 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:69995080-69995160
64251 chr16 50664200 50664200 1 + C T SKCM 50664199 + 50664179 50664219 41 GGGTAAAGCTCACCGTGGCCCCCGATGGCAGCCAGAGCAAG GGGTAAAGCTCACCGTGGCCCTCGATGGCAGCCAGAGCAAG < 41bp 0.494675433127998 0.760353735244924 0.027597517 0.33928955 prediction 0.520707470489848 Functional Gain - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50664199 chr16:50664200 nonsynonymous SNV 0.084 4 22 hm5C_associated_SNPs_106468 0 0 3 GRWD1 POSTAR2 ENCODE chr16:50664166-50664222
64251 chrX 117960386 117960386 1 + C A rs34318459 117960382 + 117960362 117960402 41 GGAGAGGTCAAGAGTGGCCCCTGGCGAATACAATGACTTCT GGAGAGGTCAAGAGTGGCCCCTGGAGAATACAATGACTTCT < 41bp 0.651915082641937 0.912260345199776 0.11938691 0.12504071 prediction 0.520690525115679 Functional Gain - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117960382 chrX:117960386 synonymous SNV . 0 25 hm5C_associated_SNPs_106469 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:117960326-117960388
64251 chr18 11851480 11851480 1 + C A rs16976750 11851476 + 11851456 11851496 41 TCTGCCTTCGGCGCGCTTCTCAGCCGGGCCGCCGACCCAAA TCTGCCTTCGGCGCGCTTCTCAGCAGGGCCGCCGACCCAAA < 41bp 0.551019218613208 0.811320097941986 0.908453 0.91342664 prediction 0.520601758657556 Functional Gain - CHMP1B ENSG00000267165 ncRNA_intronic Human antisense chr18:11851476 chr18:11851480 . . 0 25 hm5C_associated_SNPs_106473 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr18:11851469-11851490
64251 chr6 138200116 138200116 1 + C G OV 138200115 + 138200095 138200135 41 CACGCCAGCCACGCCCCAGACCACACAAGGCACTTGGATCC CACGCCAGCCACGCCCCAGACGACACAAGGCACTTGGATCC < 41bp 0.44418413862513 0.760276835083779 0.06866372 0.07869801 prediction 0.520553670167558 Functional Gain - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200115 chr6:138200116 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_106474 0 0 1 RBM15 POSTAR2 ENCODE chr6:138200068-138200117
64251 chr8 126282910 126282910 1 + T G rs149307540 126282908 + 126282888 126282928 41 AGGTTGAGATGGGAGGATCGCTTGAGGCCGGCAATTCTGGG AGGTTGAGATGGGAGGATCGCTGGAGGCCGGCAATTCTGGG < 41bp 0.446810663686902 0.760270815284344 0.39512897 0.7793358 prediction 0.520541630568687 Functional Gain - NSMCE2 ENSG00000242170 ncRNA_exonic Human misc_RNA chr8:126282908 chr8:126282910 . . 0 23 hm5C_associated_SNPs_106476 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:126282884-126282919
64251 chr22 41621037 41621037 1 + C A UCEC 41621033 + 41621013 41621053 41 ATGAAGCTGGAGGCCATTGACCCCCTGAATCTGGGCAACAT ATGAAGCTGGAGGCCATTGACCCCATGAATCTGGGCAACAT < 41bp 0.335644444996379 0.760251596225112 0.19624263 0.17124707 prediction 0.520503192450224 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41621033 chr22:41621037 nonsynonymous SNV 0.869 4 25 hm5C_associated_SNPs_106479 0 0 1 PPIG POSTAR2 ENCODE chr22:41620977-41621073
64251 chr16 20796331 20796331 1 + T G UCEC 20796328 + 20796308 20796348 41 ATAAGTTTAAAAGCTTAAAGCACTGTGTGAGTGCTGGGGAA ATAAGTTTAAAAGCTTAAAGCACGGTGTGAGTGCTGGGGAA < 41bp 0.371087223217708 0.760230038657712 0.14391845 0.3496218 prediction 0.520460077315425 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20796328 chr16:20796331 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_106480 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:20796307-20796345
64251 chr19 48259787 48259787 1 + C G rs11538664 48259786 + 48259766 48259806 41 CTCCCTCTCTGTCCTGTAGCCCGAGGGCAACATCCTTCGAG CTCCCTCTCTGTCCTGTAGCCGGAGGGCAACATCCTTCGAG < 41bp 0.436235880780977 0.76022324053414 0.35573626 0.92182195 prediction 0.520446481068281 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48259786 chr19:48259787 synonymous SNV . 0 22 hm5C_associated_SNPs_106481 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:48259748-48259796
64251 chr1 33134689 33134689 1 + T C BLCA 33134687 + 33134667 33134707 41 ATGTTTCCTGGCATCTACTCCATGAGTCTCTGTTTGGGTCA ATGTTTCCTGGCATCTACTCCACGAGTCTCTGTTTGGGTCA < 41bp 0.548143169582428 0.808323832004919 0.104614705 0.36371738 prediction 0.520361324844982 Functional Gain - RBBP4 ENSG00000162521 CDS Human protein_coding chr1:33134687 chr1:33134689 synonymous SNV . 0 23 hm5C_associated_SNPs_106486 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:33134641-33134698
64251 chr1 1223363 1223363 1 + C A rs368294602 1223359 + 1223339 1223379 41 GAGCCCCTACGGCCACTGCACCGCCGGCGGGGAAGGCGTGG GAGCCCCTACGGCCACTGCACCGCAGGCGGGGAAGGCGTGG < 41bp 0.37100872742164 0.76017258709722 0.4163861 0.35750526 prediction 0.520345174194439 Functional Gain - SCNN1D ENSG00000162572 CDS Human protein_coding chr1:1223359 chr1:1223363 synonymous SNV . 0 25 hm5C_associated_SNPs_106487 0 0 1 PPIG POSTAR2 ENCODE chr1:1223321-1223383
64251 chr16 85839515 85839515 1 + C G rs140124307 85839514 + 85839494 85839534 41 TGGGCGCCTGGACTGGGGCTCCAGCCTGCAGTGCCCATTGG TGGGCGCCTGGACTGGGGCTCGAGCCTGCAGTGCCCATTGG < 41bp 0.461087933713648 0.76015069247929 0.39170608 0.86597943 prediction 0.520301384958581 Functional Gain - COX4I1 ENSG00000131143 UTR3 Human protein_coding chr16:85839514 chr16:85839515 . . 0 22 hm5C_associated_SNPs_106491 0 0 1 AKAP8L POSTAR2 ENCODE chr16:85839451-85839515
64251 chr16 69177169 69177169 1 + C G rs144266389 69177168 + 69177148 69177188 41 GTGGGGTGTCGCCTTCTTGTCCGATGGCACTATCATAAGTG GTGGGGTGTCGCCTTCTTGTCGGATGGCACTATCATAAGTG < 41bp 0.444307238961886 0.760144932597748 0.23320356 0.8551179 prediction 0.520289865195496 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69177168 chr16:69177169 synonymous SNV . 0 22 hm5C_associated_SNPs_106493 0 0 3 DDX55 POSTAR2 ENCODE chr16:69177138-69177185
64251 chr1 165859539 165859539 1 + T C COAD 165859537 + 165859517 165859557 41 TGAGCCAGGATAGCTTCTACCGTGTCCTTACCTCGGAGCAG TGAGCCAGGATAGCTTCTACCGCGTCCTTACCTCGGAGCAG < 41bp 0.497722378661583 0.760132335870794 0.3395533 0.3234225 prediction 0.520264671741588 Functional Gain - UCK2 ENSG00000143179 CDS Human protein_coding chr1:165859537 chr1:165859539 synonymous SNV . 0 23 hm5C_associated_SNPs_106494 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr1:165859520-165859540
64251 chr16 67672509 67672509 1 + C G rs117676849 67672505 + 67672485 67672525 41 GCAGAATGGCACCCAGACCACTGCCCACCAGTGACGGACAT GCAGAATGGCACCCAGACCACTGCGCACCAGTGACGGACAT < 41bp 0.492266063952008 0.760121654404492 0.06694335 0.054595858 prediction 0.520243308808984 Functional Gain - CTCF ENSG00000102974 UTR3 Human protein_coding chr16:67672505 chr16:67672509 . . 0 25 hm5C_associated_SNPs_106496 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:67672444-67672523
64251 chr2 242758105 242758105 1 + C G HNSC 242758101 + 242758081 242758121 41 GCTCGGCTACACATGGGTATCCGCCTGAGCCAGTCCCCGCT GCTCGGCTACACATGGGTATCCGCGTGAGCCAGTCCCCGCT < 41bp 0.46615973090402 0.760117825265416 0.27905446 0.84648496 prediction 0.520235650530833 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758101 chr2:242758105 nonsynonymous SNV 0.083 4 25 hm5C_associated_SNPs_106497 0 0 2 DDX3X POSTAR2 ENCODE chr2:242758091-242758139
64251 chr19 32896716 32896716 1 + C G rs10405382 32896715 + 32896695 32896735 41 GCGGTTCTGCCCTCCTTGTACCCGCGGCGCGCTGCGGCCCG GCGGTTCTGCCCTCCTTGTACGCGCGGCGCGCTGCGGCCCG < 41bp 0.541326742321852 0.801443053824906 0.41024655 0.41743687 prediction 0.520232623006109 Functional Gain - DPY19L3 ENSG00000178904 UTR5 Human protein_coding chr19:32896715 chr19:32896716 . . 0 22 hm5C_associated_SNPs_106498 0 1 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:32896680-32896720
64251 chr3 15089520 15089520 1 + T G rs189107315 15089517 + 15089497 15089537 41 AGAGCCAGGGCCTGGCCCAGCAGTAGTTGCTCATAGACCTG AGAGCCAGGGCCTGGCCCAGCAGGAGTTGCTCATAGACCTG < 41bp 0.602594362679772 0.862699282742086 0.5766398 0.9043342 prediction 0.520209840124628 Functional Gain - NR2C2 ENSG00000177463 intronic Human protein_coding chr3:15089517 chr3:15089520 . . 0 24 hm5C_associated_SNPs_106500 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:15089498-15089561
64251 chr9 130579200 130579200 1 + C G rs41417551 130579199 + 130579179 130579219 41 CAGAGGCCTAGACTCCCACCCCACAGGGCGGTCCCGGGCAA CAGAGGCCTAGACTCCCACCCGACAGGGCGGTCCCGGGCAA < 41bp 0.571952893201988 0.832056040793872 0.12612587 0.31944877 prediction 0.520206295183769 Functional Gain - LOC102723566 ENSG00000225032 ncRNA_exonic Human antisense chr9:130579199 chr9:130579200 . . 0 22 hm5C_associated_SNPs_106501 0 0 1 DGCR8 POSTAR2 ENCODE chr9:130579190-130579221
64251 chr11 74876891 74876891 1 + C T SKCM 74876890 + 74876870 74876910 41 TGGCAGCCGGGTGCACCGACCCCGAATGATTGGCTATGGGG TGGCAGCCGGGTGCACCGACCTCGAATGATTGGCTATGGGG < 41bp 0.504267916398006 0.764355758040738 0.22470924 0.7621808 prediction 0.520175683285463 Functional Gain - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74876890 chr11:74876891 synonymous SNV . 0 22 hm5C_associated_SNPs_106503 0 0 1 BUD13 POSTAR2 ENCODE chr11:74876825-74876895
64251 chr1 38265332 38265332 1 + T C COAD 38265330 + 38265310 38265350 41 ACGACTCATACCTGACGTCCCCTGAGGCCTGGGCCCACCTC ACGACTCATACCTGACGTCCCCCGAGGCCTGGGCCCACCTC < 41bp 0.500853274808246 0.760940645321131 0.15672004 0.11150339 prediction 0.520174741025769 Functional Gain - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38265330 chr1:38265332 synonymous SNV . 0 23 hm5C_associated_SNPs_106504 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:38265289-38265332
64251 chr7 100470284 100470284 1 + T C UCEC 100470282 + 100470262 100470302 41 TGCTCAGTGTGCGGTGGGGCCATAATGCCTGAGCCAGGTCA TGCTCAGTGTGCGGTGGGGCCACAATGCCTGAGCCAGGTCA < 41bp 0.495712621445265 0.760077456518005 0.20294833 0.18680188 prediction 0.52015491303601 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100470282 chr7:100470284 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_106507 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:100470263-100470288
64251 chr9 139564106 139564106 1 + C G rs114826929 139564105 + 139564085 139564125 41 CAGCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGTGCT CAGCCCTGGGCTGGCCCCTGCGAGGCCTCGCTACGCGTGCT < 41bp 0.45320830443505 0.760047377333079 0.5012211 0.9081996 prediction 0.520094754666158 Functional Gain - EGFL7 ENSG00000172889 CDS Human protein_coding chr9:139564105 chr9:139564106 synonymous SNV . 0 22 hm5C_associated_SNPs_106511 0 0 5 DDX55 POSTAR2 ENCODE chr9:139564067-139564111
64251 chr9 124530806 124530806 1 + C T SKCM 124530805 + 124530785 124530825 41 TCCTGCTGGAGATCTCCAACCCCGAGACCCTCTCCAATACA TCCTGCTGGAGATCTCCAACCTCGAGACCCTCTCCAATACA < 41bp 0.527460859764136 0.787477775124814 0.19792122 0.9256507 prediction 0.520033830721356 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124530805 chr9:124530806 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_106513 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:124530750-124530836
64251 chr11 118869151 118869151 1 + C A rs34451365 118869147 + 118869127 118869167 41 CTCTCTGCGGCAGGTGGAGGCGGCCCGCAAGGCCATCCGCG CTCTCTGCGGCAGGTGGAGGCGGCACGCAAGGCCATCCGCG < 41bp 0.648636943964228 0.908645317947878 0.87074673 0.90185636 prediction 0.5200167479673 Functional Gain - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118869147 chr11:118869151 synonymous SNV . 0 25 hm5C_associated_SNPs_106515 0 0 2 PPIG POSTAR2 ENCODE chr11:118869138-118869167
64251 chr16 30997777 30997777 1 + C A STAD 30997773 + 30997753 30997793 41 ACGTGATCGAGGCTTGTGTGCAGACCGGAACACGGTTCCTG ACGTGATCGAGGCTTGTGTGCAGAACGGAACACGGTTCCTG < 41bp 0.354563902010049 0.76000631427905 0.26933348 0.15033475 prediction 0.520012628558101 Functional Gain - HSD3B7 ENSG00000099377 CDS Human protein_coding chr16:30997773 chr16:30997777 nonsynonymous SNV 0.666 0 25 hm5C_associated_SNPs_106516 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr16:30997755-30997780
64251 chr1 149858674 149858674 1 + C G COAD 149858670 + 149858650 149858690 41 GCGGGTGGGGGCCGGCGCGCCCGTCTACATGGCGGCGGTCC GCGGGTGGGGGCCGGCGCGCCCGTGTACATGGCGGCGGTCC < 41bp 0.520966064121835 0.780961122857688 0.19002965 0.13914397 prediction 0.519990117471707 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858670 chr1:149858674 synonymous SNV . 0 25 hm5C_associated_SNPs_106519 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:149858672-149858693
64251 chr11 14276159 14276159 1 + T A BLCA 14276155 + 14276135 14276175 41 ACCATGATGGGCCCTAGTCCCGACTGGAACGTAGGCTTATC ACCATGATGGGCCCTAGTCCCGACAGGAACGTAGGCTTATC < 41bp 0.436096005157786 0.759977410146884 0.19103658 0.49694347 prediction 0.519954820293769 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:14276155 chr11:14276159 . 0.998 3 25 hm5C_associated_SNPs_106525 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr11:14276121-14276174
64251 chr4 41941219 41941219 1 + T C BLCA 41941217 + 41941197 41941237 41 CTCTGGTAATTTGCAGGTTGCATGAAGCAGCAAGCTTTTAC CTCTGGTAATTTGCAGGTTGCACGAAGCAGCAAGCTTTTAC < 41bp 0.491038932921147 0.759975875065996 0.32264125 0.1735627 prediction 0.519951750131992 Functional Gain - TMEM33 ENSG00000109133 CDS Human protein_coding chr4:41941217 chr4:41941219 synonymous SNV . 0 23 hm5C_associated_SNPs_106526 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:41941214-41941228
64251 chr11 70281283 70281283 1 + C A rs200256430 70281279 + 70281259 70281299 41 GCGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCT GCGGCAGTAGGGCCCCCAGCCCCCACCCGGAGCTGCGCCCT < 41bp 0.360380634826606 0.759966574472415 0.13966483 0.16200274 prediction 0.519933148944831 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281279 chr11:70281283 . . 0 25 hm5C_associated_SNPs_106527 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr14 21961062 21961062 1 + T A BLCA 21961058 + 21961038 21961078 41 GTCAGTGTTGCAGGCAGCAGCAGCTGCTGCTGCTGCTGCTT GTCAGTGTTGCAGGCAGCAGCAGCAGCTGCTGCTGCTGCTT < 41bp 0.605525408883724 0.86548267466605 0.74574924 0.76406014 prediction 0.519914531564652 Functional Gain - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961058 chr14:21961062 synonymous SNV . 0 25 hm5C_associated_SNPs_106529 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:21961035-21961062
64251 chr6 35255546 35255546 1 + T C rs34368976 35255544 + 35255524 35255564 41 GCCGTACAGACAGAGGTGGGCTTGGAGGACCTGGCAGCAGA GCCGTACAGACAGAGGTGGGCTCGGAGGACCTGGCAGCAGA < 41bp 0.512481846293098 0.772432885008399 0.27286768 0.37489346 prediction 0.519902077430603 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35255544 chr6:35255546 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_106530 0 0 12 FBL POSTAR2 GSE43666,GSM1067864 chr6:35255532-35255565
64251 chr13 79190249 79190249 1 - G T LIHC 79190253 - 79190233 79190273 41 GGATTCAATGATGTCAGAGTCAGACAACAGCAAGAGCCCTT GGATTCAATGATGTCAGAGTCAGAAAACAGCAAGAGCCCTT < 41bp 0.358085220609215 0.759927534594307 0.22755113 0.2043441 prediction 0.519855069188614 Functional Gain - RNF219 ENSG00000152193 CDS Human protein_coding chr13:79190253 chr13:79190249 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106533 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:79190227-79190264
64251 chr16 839599 839599 1 + C G rs540916853 839598 + 839578 839618 41 ACACGGGCCTCACCAGCTGCCCGCAATCCCGTCCTGAGGCG ACACGGGCCTCACCAGCTGCCGGCAATCCCGTCCTGAGGCG < 41bp 0.5686031877053 0.828527440353879 0.121193856 0.75931907 prediction 0.519848505297158 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:839598 chr16:839599 nonsynonymous SNV 0.013 2 22 hm5C_associated_SNPs_106536 0 0 1 PPIG POSTAR2 ENCODE chr16:839596-839624
64251 chr8 98657041 98657041 1 + C G rs188271601 98657037 + 98657017 98657057 41 GTGCCGGCCGCGGCCCCCGACGACCTGGCCTTGCTGAAGAA GTGCCGGCCGCGGCCCCCGACGACGTGGCCTTGCTGAAGAA < 41bp 0.541966811639199 0.801888529286413 0.044894487 0.17563978 prediction 0.519843435294428 Functional Gain - MTDH ENSG00000147649 CDS Human protein_coding chr8:98657037 chr8:98657041 nonsynonymous SNV 0.112 0 25 hm5C_associated_SNPs_106537 0 0 8 NOP58 POSTAR2 GSE43666,GSM1067861 chr8:98657040-98657060
64251 chr5 43653235 43653235 1 + C A UCEC 43653231 + 43653211 43653251 41 TGATTGGGGTTGCTGGAGGACTGGCAGCCACCCTCGGAGTC TGATTGGGGTTGCTGGAGGACTGGAAGCCACCCTCGGAGTC < 41bp 0.665705716733868 0.925594195836655 0.7609187 0.603647 prediction 0.519776958205574 Functional Gain - NNT ENSG00000112992 CDS Human protein_coding chr5:43653231 chr5:43653235 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_106540 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:43653229-43653253
64251 chr7 39606101 39606101 1 + C G HNSC 39606097 + 39606077 39606117 41 TGACGAAGAAGCAGACGAGTCGCTCCTGGCGCAGCGGGAAT TGACGAAGAAGCAGACGAGTCGCTGCTGGCGCAGCGGGAAT < 41bp 0.512860169554645 0.772744191618326 0.1801956 0.1456356 prediction 0.519768044127361 Functional Gain - YAE1D1 ENSG00000241127 CDS Human protein_coding chr7:39606097 chr7:39606101 synonymous SNV . 0 25 hm5C_associated_SNPs_106542 0 0 1 DDX3X POSTAR2 ENCODE chr7:39605996-39606123
64251 chr17 4926964 4926964 1 + C G KIRC 4926960 + 4926940 4926980 41 CGTGGTCGTCTTCGCTGGCTCAAGCAGGAGCAGCTACGGCT CGTGGTCGTCTTCGCTGGCTCAAGGAGGAGCAGCTACGGCT < 41bp 0.485430744143293 0.759881686217201 0.6761012 0.9070448 prediction 0.519763372434402 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4926960 chr17:4926964 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106543 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:4926925-4926986
64251 chr2 175289314 175289314 1 + T C rs17255817 175289312 + 175289292 175289332 41 AAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTC AAAAGAAATCACATTTTAAGCCCGACAGAAGACACCCACTC < 41bp 0.488709635511139 0.759879107297636 0.0072004795 0.009863704 prediction 0.519758214595272 Functional Gain - SCRN3 ENSG00000144306 CDS Human protein_coding chr2:175289312 chr2:175289314 synonymous SNV . 0 23 hm5C_associated_SNPs_106544 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:175289303-175289331
64251 chr1 110882083 110882083 1 + C G BLCA 110882079 + 110882059 110882099 41 GGCGGAGTCCAAGATGGCGGCGTGCGGTTCCGCTGTGTGAA GGCGGAGTCCAAGATGGCGGCGTGGGGTTCCGCTGTGTGAA < 41bp 0.491570023264306 0.759869040267962 0.20924339 0.43124586 prediction 0.519738080535924 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882079 chr1:110882083 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_106548 0 0 2 DDX3X POSTAR2 ENCODE chr1:110882071-110882161
64251 chr7 891069 891069 1 + C A STAD 891065 + 891045 891085 41 GCAGGATCGGAGCTGTGGGCCAGGCTGTGTCCAGGACGGCG GCAGGATCGGAGCTGTGGGCCAGGATGTGTCCAGGACGGCG < 41bp 0.633756198420517 0.893613511717002 0.29020894 0.37519455 prediction 0.519714626592972 Functional Gain - SUN1 ENSG00000164828 CDS Human protein_coding chr7:891065 chr7:891069 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_106549 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:891033-891081
64251 chr17 76203060 76203060 1 + T G BLCA 76203058 + 76203038 76203078 41 CTGGTCCACGTGCATCCCACCTTGGGAAGCCTCTCCAAAGA CTGGTCCACGTGCATCCCACCTGGGGAAGCCTCTCCAAAGA < 41bp 0.61190097296684 0.871714529838833 0.093838036 0.7235879 prediction 0.519627113743987 Functional Gain - AFMID ENSG00000183077 CDS Human protein_coding chr17:76203058 chr17:76203060 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_106555 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:76203016-76203063
64251 chr22 39439011 39439011 1 + T G PRAD 39439009 + 39438989 39439029 41 ATAATAGACCCATCCTTTCTCGTCGGAATACCGTCTGGCTG ATAATAGACCCATCCTTTCTCGGCGGAATACCGTCTGGCTG < 41bp 0.418406715704288 0.75980868415455 0.8256685 0.9589319 prediction 0.5196173683091 Functional Gain - APOBEC3F ENSG00000128394 CDS Human protein_coding chr22:39439009 chr22:39439011 synonymous SNV . 0 23 hm5C_associated_SNPs_106557 0 0 1 GRWD1 POSTAR2 ENCODE chr22:39439011-39439118
64251 chr13 42877901 42877901 1 + C A rs201525107 42877897 + 42877877 42877917 41 GCTGAGCAGTACCAGCCTGGCAGCCGACAGTGGGATCGGAC GCTGAGCAGTACCAGCCTGGCAGCAGACAGTGGGATCGGAC < 41bp 0.367745264637382 0.759774534847466 0.387402 0.27145532 prediction 0.519549069694931 Functional Gain - AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42877897 chr13:42877901 synonymous SNV . 0 25 hm5C_associated_SNPs_106561 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:42877880-42877933
64251 chr16 70176252 70176252 1 + T C SKCM 70176250 + 70176230 70176270 41 GAGCCAGGTGGATGGAGAAACATGGATTTGAGAGGCCAAAG GAGCCAGGTGGATGGAGAAACACGGATTTGAGAGGCCAAAG < 41bp 0.513352786360004 0.773126407383924 0.27393538 0.33761495 prediction 0.519547242047838 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70176250 chr16:70176252 synonymous SNV . 0 23 hm5C_associated_SNPs_106562 0 0 2 DDX24 POSTAR2 ENCODE chr16:70176249-70176293
64251 chr17 36912206 36912206 1 + C G UCEC 36912205 + 36912185 36912225 41 CGGCAGATCAAACCTTATACCCTCATGAGCATGGTGGCCAA CGGCAGATCAAACCTTATACCGTCATGAGCATGGTGGCCAA < 41bp 0.581956201950209 0.841726843010549 0.053315997 0.16361412 prediction 0.51954128212068 Functional Gain - PSMB3 ENSG00000108294 CDS Human other chr17:36912205 chr17:36912206 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_106564 0 0 12 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:36912187-36912208
64251 chr19 30313009 30313009 1 + C T SKCM 30313008 + 30312988 30313028 41 AAGTGCTACTGCCGCAGTATCCCCAGCAAATCTTTATACAG AAGTGCTACTGCCGCAGTATCTCCAGCAAATCTTTATACAG < 41bp 0.526334190802296 0.786076474303013 0.051812053 0.94261456 prediction 0.519484567001434 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313008 chr19:30313009 nonsynonymous SNV 0.986 3 22 hm5C_associated_SNPs_106566 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr19:30312977-30313013
64251 chr19 50436081 50436081 1 + C A LGG 50436077 + 50436057 50436097 41 CCCCTCCTCCTTCTCCACCTCAACCTTCTCGCCTGGCCCCC CCCCTCCTCCTTCTCCACCTCAACATTCTCGCCTGGCCCCC < 41bp 0.348822427602406 0.759729907065102 0.03988871 0.06730428 prediction 0.519459814130205 Functional Gain - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50436077 chr19:50436081 nonsynonymous SNV 0.003 0 25 hm5C_associated_SNPs_106567 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50436046-50436119
64251 chr13 114149919 114149919 1 + T G HNSC 114149917 + 114149897 114149937 41 ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCC ATGAAGGTGTTGGGAAGAAGCTGCTTCTGGGTGCTGTTTCC < 41bp 0.421874315114327 0.759727362388445 0.31781134 0.3773167 prediction 0.51945472477689 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114149917 chr13:114149919 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_106568 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:114149897-114149935
64251 chr12 124239052 124239052 1 + T G CESC 124239050 + 124239030 124239070 41 ATCTCCAACACCGCCTCCTACCTGAGGCTCTGGGCGCTTAG ATCTCCAACACCGCCTCCTACCGGAGGCTCTGGGCGCTTAG < 41bp 0.407932320266474 0.759677562230143 0.58057404 0.94714844 prediction 0.519355124460286 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124239050 chr12:124239052 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_106574 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:124239048-124239064
64251 chr21 46643323 46643323 1 + C G rs576523530 46643319 + 46643299 46643339 41 GGCCCCACGACAGAGGGAGTCAGCCCGGGAGGTCAGGAGCG GGCCCCACGACAGAGGGAGTCAGCGCGGGAGGTCAGGAGCG < 41bp 0.550477992252289 0.810135187134425 0.86192465 0.9003719 prediction 0.519314389764271 Functional Gain - ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46643319 chr21:46643323 . . 0 25 hm5C_associated_SNPs_106577 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:46643309-46643357
64251 chr19 21216970 21216970 1 + C A rs144051683 21216966 + 21216946 21216986 41 AGCCCTGGAATATGAAGAGACATGCGATGGTAGATCAACCC AGCCCTGGAATATGAAGAGACATGAGATGGTAGATCAACCC < 41bp 0.364928033932303 0.759641048154565 0.065063745 0.2132256 prediction 0.51928209630913 Functional Gain - ZNF430 ENSG00000118620 CDS Human protein_coding chr19:21216966 chr19:21216970 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_106578 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:21216948-21216984
64251 chr4 1737512 1737512 1 + C T CESC 1737511 + 1737491 1737531 41 TACCTCAAGTTCGACCCCCTCCTGAGGGACAGTCCTGGTAG TACCTCAAGTTCGACCCCCTCTTGAGGGACAGTCCTGGTAG < 41bp 0.501046930578371 0.76064437220592 0.1270014 0.14370328 prediction 0.519194883255097 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1737511 chr4:1737512 synonymous SNV . 0 22 hm5C_associated_SNPs_106582 0 0 17 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:1737481-1737514
64251 chr20 8609040 8609040 1 + C A LAML 8609036 + 8609016 8609056 41 GGGCCTGACCTCGTGAACATCTCCCATTTGAATCTCGTGGC GGGCCTGACCTCGTGAACATCTCCAATTTGAATCTCGTGGC < 41bp 0.379229675321663 0.7595939954079 0.3397321 0.95619285 prediction 0.5191879908158 Functional Gain - PLCB1 ENSG00000182621 CDS Human protein_coding chr20:8609036 chr20:8609040 nonsynonymous SNV 0.957 2 25 hm5C_associated_SNPs_106584 0 0 2 PPIG POSTAR2 ENCODE chr20:8609014-8609080
64251 chr19 37742849 37742849 1 + C G rs139781852 37742848 + 37742828 37742868 41 GCACGGCGGGTATAGTGGTTCCGCAACCTTGGGATGTTCGG GCACGGCGGGTATAGTGGTTCGGCAACCTTGGGATGTTCGG < 41bp 0.467471140579929 0.75959020573806 0.56896335 0.88618445 prediction 0.51918041147612 Functional Gain - LINC01535 ENSG00000226686 ncRNA_exonic Human lincRNA chr19:37742848 chr19:37742849 . . 0 22 hm5C_associated_SNPs_106585 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37742840-37742860
64251 chr1 220970101 220970101 1 + C G rs150126154 220970097 + 220970077 220970117 41 TGCACTTCGAGCCTCACATGCGACCGAGACGTCCTCATCAA TGCACTTCGAGCCTCACATGCGACGGAGACGTCCTCATCAA < 41bp 0.555355189452678 0.814916204619694 0.31457093 0.65484524 prediction 0.519122030334032 Functional Gain - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220970097 chr1:220970101 nonsynonymous SNV 0.068 2 25 hm5C_associated_SNPs_106591 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:220970098-220970122
64251 chr4 103459077 103459077 1 + T G SKCM 103459074 + 103459054 103459094 41 CATGGTGGACTACCTGGTGCCTCTAGTGAAAAGAACAAGAA CATGGTGGACTACCTGGTGCCTCGAGTGAAAAGAACAAGAA < 41bp 0.399312171062938 0.759559710997126 0.690718 0.23931208 prediction 0.519119421994251 Functional Gain - NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103459074 chr4:103459077 synonymous SNV . 0 24 hm5C_associated_SNPs_106593 0 0 2 BUD13 POSTAR2 ENCODE chr4:103459053-103459118
64251 chr3 152880293 152880293 1 + C A rs142864284 152880289 + 152880269 152880309 41 CGCACCCCAGGGATACGCTGCCGCCGCCGCCGGCCGGCCCG CGCACCCCAGGGATACGCTGCCGCAGCCGCCGGCCGGCCCG < 41bp 0.539004636442921 0.798552623326758 0.29854268 0.39814442 prediction 0.519095973767673 Functional Gain - RAP2B ENSG00000181467 UTR5 Human protein_coding chr3:152880289 chr3:152880293 . . 0 25 hm5C_associated_SNPs_106597 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:152880280-152880300
64251 chr16 88017810 88017810 1 + C T HNSC 88017809 + 88017789 88017829 41 CAGCACAGCCCCATCCAGGTCCCCATGGTGGCCGGCTCCCC CAGCACAGCCCCATCCAGGTCTCCATGGTGGCCGGCTCCCC < 41bp 0.537551620898379 0.797067222545905 0.51545537 0.9670783 prediction 0.519031203295053 Functional Gain - BANP ENSG00000172530 CDS Human protein_coding chr16:88017809 chr16:88017810 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_106598 0 0 4 BUD13 POSTAR2 ENCODE chr16:88017806-88017853
64251 chr4 37863199 37863199 1 + C A PAAD 37863195 + 37863175 37863215 41 CTATTGAAGAACATTTTTTCCAGCCACAGAAGTACAATCTG CTATTGAAGAACATTTTTTCCAGCAACAGAAGTACAATCTG < 41bp 0.368877024106315 0.759506123335098 0.12315893 0.23248246 prediction 0.519012246670195 Functional Gain - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37863195 chr4:37863199 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_106599 0 0 1 DDX24 POSTAR2 ENCODE chr4:37863166-37863214
64251 chr19 33464132 33464132 1 + C A PRAD 33464128 + 33464108 33464148 41 AAAGAACCCCCCTGATGATACGGGCCCCGTGCACGTGCCTT AAAGAACCCCCCTGATGATACGGGACCCGTGCACGTGCCTT < 41bp 0.652498332638048 0.911979781743445 0.38322794 0.48684645 prediction 0.518962898210795 Functional Gain - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33464128 chr19:33464132 synonymous SNV . 0 25 hm5C_associated_SNPs_106602 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:33464109-33464147
64251 chrX 47102986 47102986 1 + T C LIHC 47102984 + 47102964 47103004 41 TGGGAGGGCCTGTATAACGTCCTGATGTACCGGCTCTCGTA TGGGAGGGCCTGTATAACGTCCCGATGTACCGGCTCTCGTA < 41bp 0.54104408896489 0.800508509990524 0.33293042 0.35294527 prediction 0.518928842051269 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47102984 chrX:47102986 nonsynonymous SNV 0.423 1 23 hm5C_associated_SNPs_106603 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:47102956-47102998
64251 chr2 171572790 171572790 1 + C A SKCM 171572786 + 171572766 171572806 41 CAGGACCGCACCCCCAGCGCCTCCCCGGACCTGGGCAAGCA CAGGACCGCACCCCCAGCGCCTCCACGGACCTGGGCAAGCA < 41bp 0.343539775471434 0.759459127288616 0.12578598 0.9654692 prediction 0.518918254577232 Functional Gain - SP5 ENSG00000204335 CDS Human protein_coding chr2:171572786 chr2:171572790 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106604 0 0 4 DDX3X POSTAR2 ENCODE chr2:171572773-171572894
64251 chr19 34838929 34838929 1 + C T SKCM 34838928 + 34838908 34838948 41 CGCATCGGACCTGGCCCTTCCCCGAGTTCTTCACAGAAGGG CGCATCGGACCTGGCCCTTCCTCGAGTTCTTCACAGAAGGG < 41bp 0.506158058238315 0.765610721980156 0.50297123 0.72044665 prediction 0.518905327483682 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34838928 chr19:34838929 nonsynonymous SNV 0.970 4 22 hm5C_associated_SNPs_106608 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:34838896-34838941
64251 chr4 2632748 2632748 1 + T A KIRP 2632744 + 2632724 2632764 41 TGCTGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCT TGCTGGAGATGAAGGTCCGCCTGCACCGGCAGCTGTCGGCT < 41bp 0.421196368261975 0.759452149649226 0.41172013 0.20962995 prediction 0.518904299298453 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2632744 chr4:2632748 nonsynonymous SNV 0.980 4 25 hm5C_associated_SNPs_106609 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:2632722-2632750
64251 chr16 21964769 21964769 1 + T A ESCA 21964765 + 21964745 21964785 41 ATGAAGCTACTAACCAGAGCCGGCTCTTTCTCGGTGAGCTC ATGAAGCTACTAACCAGAGCCGGCACTTTCTCGGTGAGCTC < 41bp 0.466360492880033 0.759383246780865 0.07531485 0.08687839 prediction 0.51876649356173 Functional Gain - UQCRC2 ENSG00000140740 CDS Human protein_coding chr16:21964765 chr16:21964769 nonsynonymous SNV 0.869 0 25 hm5C_associated_SNPs_106616 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:21964736-21964774
64251 chr17 4905377 4905377 1 + C A rs138692366 4905373 + 4905353 4905393 41 GCTCTGTGAGGACCTCTTCTCTCGCGTTAGTGAGAACCAGA GCTCTGTGAGGACCTCTTCTCTCGAGTTAGTGAGAACCAGA < 41bp 0.34415493949698 0.759363750704032 0.17653209 0.38144347 prediction 0.518727501408065 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4905373 chr17:4905377 synonymous SNV . 0 25 hm5C_associated_SNPs_106617 0 0 8 SRSF1 POSTAR2 GSE83923,GSM2221667 chr17:4905360-4905380
64251 chr1 228675246 228675246 1 + C A rs536308340 228675242 + 228675222 228675262 41 CTGCGCCCTGTGCCAGCGCGCGCCCCGGGAACCGGTGCGCG CTGCGCCCTGTGCCAGCGCGCGCCACGGGAACCGGTGCGCG < 41bp 0.637140347629834 0.896500546636231 0.08712593 0.15642887 prediction 0.518720398012793 Functional Gain - RNF187 ENSG00000168159 UTR5 Human protein_coding chr1:228675242 chr1:228675246 . . 0 25 hm5C_associated_SNPs_106619 0 0 6 DDX3X POSTAR2 ENCODE chr1:228675147-228675271
64251 chr8 77690538 77690538 1 + T A LUSC 77690534 + 77690514 77690554 41 CCACCAAGGTCAAGTTGAATCTGGTACAACATGTCCGTTCG CCACCAAGGTCAAGTTGAATCTGGAACAACATGTCCGTTCG < 41bp 0.454187984191857 0.759346988605016 0.49844778 0.807945 prediction 0.518693977210032 Functional Gain - ZFHX4 ENSG00000091656 CDS Human protein_coding chr8:77690534 chr8:77690538 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_106623 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:77690520-77690540
64251 chr10 72633215 72633215 1 + C T DLBC 72633214 + 72633194 72633234 41 GCAGGGTGGCATCTATGCTTCCCCAACCATCGCAGGCTCAC GCAGGGTGGCATCTATGCTTCTCCAACCATCGCAGGCTCAC < 41bp 0.53541484336432 0.794760135440735 0.111769885 0.9184272 prediction 0.51869058415283 Functional Gain - SGPL1 ENSG00000166224 CDS Human protein_coding chr10:72633214 chr10:72633215 synonymous SNV . 0 22 hm5C_associated_SNPs_106624 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:72633190-72633222
64251 chr19 52795604 52795604 1 + C A rs530013877 52795600 + 52795580 52795620 41 CATGCTTATTGCAGTTAGCACACACTTTTCCTGACAGGCAC CATGCTTATTGCAGTTAGCACACAATTTTCCTGACAGGCAC < 41bp 0.433327780700774 0.759314043886628 0.13126296 0.20827144 prediction 0.518628087773255 Functional Gain - ZNF766 ENSG00000269102 ncRNA_intronic Human antisense chr19:52795600 chr19:52795604 . . 0 25 hm5C_associated_SNPs_106629 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:52795597-52795624
64251 chr20 34287591 34287591 1 + C A STAD 34287587 + 34287567 34287607 41 GTGGGTCCCTACGGACAGTCCCAGCCAAGCTGCTTCGACCG GTGGGTCCCTACGGACAGTCCCAGACAAGCTGCTTCGACCG < 41bp 0.370304261029036 0.759290543594109 0.05565837 0.09661493 prediction 0.518581087188217 Functional Gain - ROMO1 ENSG00000125995 CDS Human protein_coding chr20:34287587 chr20:34287591 nonsynonymous SNV 0.990 3 25 hm5C_associated_SNPs_106630 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:34287540-34287600
64251 chr12 549866 549866 1 + C T SKCM 549865 + 549845 549885 41 TTCCTTAGAAGAAGAACTTGCCCGAATTCGTGAGGAAGAGG TTCCTTAGAAGAAGAACTTGCTCGAATTCGTGAGGAAGAGG < 41bp 0.507486218384751 0.766764455847938 0.063530475 0.21104962 prediction 0.518556474926373 Functional Gain - CCDC77 ENSG00000120647 CDS Human protein_coding chr12:549865 chr12:549866 synonymous SNV . 0 22 hm5C_associated_SNPs_106632 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:549851-549889
64251 chr8 38854660 38854660 1 + C A rs148707472 38854656 + 38854636 38854676 41 GTTGCTTGGCCTGGTGGGCCCAGTCCTCGGTGCGGCGCGGC GTTGCTTGGCCTGGTGGGCCCAGTACTCGGTGCGGCGCGGC < 41bp 0.635514246080476 0.894788574826146 0.48233104 0.8330982 prediction 0.51854865749134 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38854656 chr8:38854660 synonymous SNV . 0 25 hm5C_associated_SNPs_106633 2 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:38854637-38854665
64251 chr9 133333935 133333935 1 + C A rs143405567 133333931 + 133333911 133333951 41 CGCAAACAAGTGGAAATCGCCCAGCGGGAGGGGGCCAAGTA CGCAAACAAGTGGAAATCGCCCAGAGGGAGGGGGCCAAGTA < 41bp 0.34914633291681 0.759255734439451 0.24658948 0.18005529 prediction 0.518511468878903 Functional Gain - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133333931 chr9:133333935 synonymous SNV . 0 25 hm5C_associated_SNPs_106636 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:133333924-133333962
64251 chr6 44390536 44390536 1 + T C UCEC 44390534 + 44390514 44390554 41 GACTATAGTGATCCCTCTTACGTGAAGCAGATGGTAAATGT GACTATAGTGATCCCTCTTACGCGAAGCAGATGGTAAATGT < 41bp 0.544584372192841 0.803794127879114 0.7848981 0.85824347 prediction 0.518419511372548 Functional Gain - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44390534 chr6:44390536 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_106643 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:44390485-44390547
64251 chr19 17970751 17970751 1 + C A rs549094579 17970747 + 17970727 17970767 41 CTTCCTTTTGCGGGTGGCGGCGAACGCGGAGAGCACGCCAT CTTCCTTTTGCGGGTGGCGGCGAAAGCGGAGAGCACGCCAT < 41bp 0.535131637877408 0.794337929228867 0.86506975 0.8992958 prediction 0.518412582702919 Functional Gain - RPL18A ENSG00000105640 UTR5 Human protein_coding chr19:17970747 chr19:17970751 . . 0 25 hm5C_associated_SNPs_106645 0 0 1 DDX3X POSTAR2 ENCODE chr19:17970751-17970783
64251 chr6 43100234 43100234 1 + C T UCEC 43100233 + 43100213 43100253 41 AGCGTGTGACCTGCCTTCCCCCCAAGGGTCTGCCAGAGCCC AGCGTGTGACCTGCCTTCCCCTCAAGGGTCTGCCAGAGCCC < 41bp 0.509390660748803 0.768592747387501 0.047102273 0.06318906 prediction 0.518404173277396 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43100233 chr6:43100234 nonsynonymous SNV 0.799 3 22 hm5C_associated_SNPs_106646 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr6:43100207-43100235
64251 chr5 131728258 131728258 1 + C T SKCM 131728257 + 131728237 131728277 41 CATGGGTGTGGGAGTCAGCTCCACAGCATCCCGCCTGGGCA CATGGGTGTGGGAGTCAGCTCTACAGCATCCCGCCTGGGCA < 41bp 0.510503711891556 0.769683531134843 0.31363663 0.75953364 prediction 0.518359638486574 Functional Gain - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131728257 chr5:131728258 synonymous SNV . 0 22 hm5C_associated_SNPs_106649 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:131728255-131728308
64251 chr16 681342 681342 1 + C A rs80030357 681338 + 681318 681358 41 TGCTGCCAGGGCTGGGGAGCCACCCGGGCGTGTGCCCCAAC TGCTGCCAGGGCTGGGGAGCCACCAGGGCGTGTGCCCCAAC < 41bp 0.653223365710371 0.912401055959426 0.44350672 0.87846184 prediction 0.51835538049811 Functional Gain - WFIKKN1 ENSG00000127578 CDS Human protein_coding chr16:681338 chr16:681342 nonsynonymous SNV 0.050 0 25 hm5C_associated_SNPs_106651 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585668 chr16:681320-681343
64251 chr12 121154503 121154503 1 + T A BRCA 121154499 + 121154479 121154519 41 CAGGACGTTTTGTCCGCTATCAGTTCACACCGGCATTTCTC CAGGACGTTTTGTCCGCTATCAGTACACACCGGCATTTCTC < 41bp 0.439397680057477 0.759165255245873 0.27015334 0.36914718 prediction 0.518330510491747 Functional Gain - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154499 chr12:121154503 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_106654 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr12:121154500-121154520
64251 chr16 23569566 23569566 1 + C A UCEC 23569562 + 23569542 23569582 41 GAAGTTCCCCCTGGACAGCACAGGCTCCGAGCTGAAACAGA GAAGTTCCCCCTGGACAGCACAGGATCCGAGCTGAAACAGA < 41bp 0.353684635702602 0.759159896739219 0.18013453 0.2945848 prediction 0.518319793478437 Functional Gain - UBFD1 ENSG00000103353 CDS Human protein_coding chr16:23569562 chr16:23569566 synonymous SNV . 0 25 hm5C_associated_SNPs_106655 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:23569487-23569575
64251 chr1 11884570 11884570 1 + T C SKCM 11884568 + 11884548 11884588 41 TTCGTGGAGAAGGAAGGCCCCATGATCCACAGTGGTTCGGT TTCGTGGAGAAGGAAGGCCCCACGATCCACAGTGGTTCGGT < 41bp 0.541244171234135 0.800392391010946 0.39278996 0.6323904 prediction 0.518296439553621 Functional Gain - CLCN6 ENSG00000011021 CDS Human protein_coding chr1:11884568 chr1:11884570 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_106656 0 0 10 BUD13 POSTAR2 ENCODE chr1:11884526-11884661
64251 chr17 34958290 34958290 1 + C G rs150494595 34958289 + 34958269 34958309 41 GACCTGGGGTCGCCTCGTCACCCGTCATTTCTCCCATGCAG GACCTGGGGTCGCCTCGTCACGCGTCATTTCTCCCATGCAG < 41bp 0.576283472522061 0.835423323802 0.04183376 0.2155816 prediction 0.518279702559878 Functional Gain - MRM1 ENSG00000129282 CDS Human other chr17:34958289 chr17:34958290 synonymous SNV . 0 22 hm5C_associated_SNPs_106658 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:34958242-34958301
64251 chr20 44567730 44567730 1 + C G HNSC 44567729 + 44567709 44567749 41 ATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTT ATCAGAGCCAGCCCTGTTCTCGAAAGCCAATCCGCCTGGTT < 41bp 0.594059592375726 0.853160150353443 0.59271693 0.9192686 prediction 0.518201115955434 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44567729 chr20:44567730 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_106664 0 0 1 PPIG POSTAR2 ENCODE chr20:44567729-44567762
64251 chr15 78792487 78792487 1 + C G rs113739008 78792483 + 78792463 78792503 41 ATTACAGGTGTGAGCCACCACACCCGGCCTATATTGTTTTG ATTACAGGTGTGAGCCACCACACCGGGCCTATATTGTTTTG < 41bp 0.503728047295975 0.762807690160562 0.03198114 0.109134704 prediction 0.518159285729174 Functional Gain - IREB2 ENSG00000136381 UTR3 Human protein_coding chr15:78792483 chr15:78792487 . . 0 25 hm5C_associated_SNPs_106669 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:78792476-78792503
64251 chr1 212793940 212793940 1 + T G rs180985365 212793937 + 212793917 212793957 41 CAGCTGTGAGAAGTCACTCACACTGGCCACAAGGACGCTGG CAGCTGTGAGAAGTCACTCACACGGGCCACAAGGACGCTGG < 41bp 0.447463111327548 0.759070934368447 0.11295828 0.4144473 prediction 0.518141868736893 Functional Gain - ATF3 ENSG00000162772 UTR3 Human protein_coding chr1:212793937 chr1:212793940 . . 0 24 hm5C_associated_SNPs_106671 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212793833-212794003
64251 chr5 72286600 72286600 1 + C A COAD 72286596 + 72286576 72286616 41 AAACCATTCAGAGCATAACTCAGGCCCTCCAGAAATCCAAG AAACCATTCAGAGCATAACTCAGGACCTCCAGAAATCCAAG < 41bp 0.361735919465611 0.759043057187626 0.88375086 0.6843527 prediction 0.518086114375251 Functional Gain - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72286596 chr5:72286600 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_106675 0 0 7 SRSF1 POSTAR2 GSE83923,GSM2221666 chr5:72286580-72286600
64251 chr6 147680410 147680410 1 + C T UCEC 147680409 + 147680389 147680429 41 TGTCATTGCACTGAACCTTCCCCCAGGGGGAGAGCAAAGAC TGTCATTGCACTGAACCTTCCTCCAGGGGGAGAGCAAAGAC < 41bp 0.481905517059608 0.759029457716355 0.06255856 0.93498266 prediction 0.51805891543271 Functional Gain - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147680409 chr6:147680410 synonymous SNV . 0 22 hm5C_associated_SNPs_106681 0 0 3 FMR1 POSTAR2 ENCODE chr6:147680396-147680437
64251 chr19 6857209 6857209 1 + C G rs55886724 6857205 + 6857185 6857225 41 GCCAGGGGCTGTGACAGCTCCCGGCGGGTGGAGACTTTGGG GCCAGGGGCTGTGACAGCTCCCGGGGGGTGGAGACTTTGGG < 41bp 0.544884894936945 0.803900132628066 0.8692092 0.91168594 prediction 0.518030475382242 Functional Gain - VAV1 ENSG00000141968 UTR3 Human protein_coding chr19:6857205 chr19:6857209 . . 0 25 hm5C_associated_SNPs_106685 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:6857197-6857237
64251 chrX 54837460 54837460 1 + T A UCEC 54837456 + 54837436 54837476 41 AGCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCA AGCCTTGCTCTCCCTGAGATCACCAAAAGCCCGTAGGGGCA < 41bp 0.621195497210813 0.880204041548717 0.23922771 0.32969746 prediction 0.518017088675808 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837456 chrX:54837460 synonymous SNV . 0 25 hm5C_associated_SNPs_106687 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:54837459-54837460
64251 chr1 204091106 204091106 1 + C A STAD 204091102 + 204091082 204091122 41 CTGGGGCCATGGCCACCCACCACCCCCTGCAGGTACCGCCC CTGGGGCCATGGCCACCCACCACCACCTGCAGGTACCGCCC < 41bp 0.328095151853001 0.758966157954722 0.20884672 0.17823923 prediction 0.517932315909443 Functional Gain - SOX13 ENSG00000143842 CDS Human protein_coding chr1:204091102 chr1:204091106 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_106692 0 0 1 PRPF8 POSTAR2 ENCODE chr1:204091103-204091152
64251 chr22 24121476 24121476 1 + C A TGCT 24121472 + 24121452 24121492 41 CCTGCCACGCAGGAAGCCCCCCGGCCTGCCAGCAGCCTCAG CCTGCCACGCAGGAAGCCCCCCGGACTGCCAGCAGCCTCAG < 41bp 0.646353305019935 0.905194778566091 0.40979287 0.49760276 prediction 0.517682947092312 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24121472 chr22:24121476 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_106700 0 0 3 BUD13 POSTAR2 ENCODE chr22:24121469-24121525
64251 chr5 154181877 154181877 1 + C A COAD 154181873 + 154181853 154181893 41 GTGCCAAGATGAGCGCCGAACTGGCCAAGGTCATTAATGAT GTGCCAAGATGAGCGCCGAACTGGACAAGGTCATTAATGAT < 41bp 0.334419541544025 0.758833669421426 0.18786249 0.2660848 prediction 0.517667338842851 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154181873 chr5:154181877 nonsynonymous SNV 0.983 2 25 hm5C_associated_SNPs_106701 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:154181860-154181880
64251 chr12 50157147 50157147 1 + T G rs3782324 50157144 + 50157124 50157164 41 GGAAAGAAGTTCAGTGGTCCCATTGTTAACTCAGCCTCAAA GGAAAGAAGTTCAGTGGTCCCATGGTTAACTCAGCCTCAAA < 41bp 0.365894116300423 0.758813228046218 0.041101277 0.27360433 prediction 0.517626456092436 Functional Gain - TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50157144 chr12:50157147 . . 0 24 hm5C_associated_SNPs_106704 0 0 60 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:50157011-50157251
64251 chr7 73118368 73118368 1 + C G rs530041734 73118364 + 73118344 73118384 41 ACTCAGCAGCTGCCTCGGGCCACCCGCCTCGGGCCCCTAAC ACTCAGCAGCTGCCTCGGGCCACCGGCCTCGGGCCCCTAAC < 41bp 0.470080422389344 0.758811726673346 0.05385703 0.16086692 prediction 0.517623453346692 Functional Gain - STX1A ENSG00000071462 UTR3 Human protein_coding chr7:73118364 chr7:73118368 . . 0 25 hm5C_associated_SNPs_106705 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:73118342-73118379
64251 chr19 48965218 48965218 1 + C G ACC 48965217 + 48965197 48965237 41 CTACCTGAGCGACCTGTTCACCACATGCGTGGACGTGCGCT CTACCTGAGCGACCTGTTCACGACATGCGTGGACGTGCGCT < 41bp 0.591626403080061 0.850417235452944 0.41207653 0.6484742 prediction 0.517581664745767 Functional Gain - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48965217 chr19:48965218 synonymous SNV . 0 22 hm5C_associated_SNPs_106707 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:48965203-48965222
64251 chr12 113629450 113629450 1 + C G SKCM 113629449 + 113629429 113629469 41 ATGTCCCCAGCACTGGTCATCCAGCCACCAGTGCCCCCCAC ATGTCCCCAGCACTGGTCATCGAGCCACCAGTGCCCCCCAC < 41bp 0.446489205098546 0.758780434385078 0.07966843 0.42511857 prediction 0.517560868770156 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629449 chr12:113629450 nonsynonymous SNV 0.013 1 22 hm5C_associated_SNPs_106709 0 0 1 PCBP2 POSTAR2 ENCODE chr12:113629402-113629466
64251 chr16 71950431 71950431 1 + C G LUAD 71950427 + 71950407 71950447 41 TGGCTGCTGGGAAAGATGAACGAGCTCGGATCCGTGTGGAG TGGCTGCTGGGAAAGATGAACGAGGTCGGATCCGTGTGGAG < 41bp 0.533959096259932 0.792708666443309 0.3197735 0.4214708 prediction 0.517499140366754 Functional Gain - IST1 ENSG00000182149 CDS Human protein_coding chr16:71950427 chr16:71950431 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_106715 0 0 3 GRWD1 POSTAR2 ENCODE chr16:71950407-71950548
64251 chr17 42427851 42427851 1 + T G BRCA 42427848 + 42427828 42427868 41 AGGGTGCACTGCTGTCCGCACGGTGCCTTCTGCGACCTGGT AGGGTGCACTGCTGTCCGCACGGGGCCTTCTGCGACCTGGT < 41bp 0.341940400724706 0.758742673344635 0.04665506 0.80405784 prediction 0.51748534668927 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42427848 chr17:42427851 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_106716 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr17:42427822-42427858
64251 chr7 139026191 139026191 1 + C G LUSC 139026187 + 139026167 139026207 41 GGACTTCTGCGGGAGTTGCGCTACCTGAGCGCGGCCACCGG GGACTTCTGCGGGAGTTGCGCTACGTGAGCGCGGCCACCGG < 41bp 0.540067553323976 0.798795200246869 0.48646778 0.4743207 prediction 0.517455293845786 Functional Gain - C7orf55-LUC7L2;FMC1 ENSG00000164898;ENSG00000269955 CDS Human other chr7:139026187 chr7:139026191 nonsynonymous SNV 0.957 0 25 hm5C_associated_SNPs_106718 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:139026129-139026196
64251 chr15 80460483 80460483 1 + C A UCEC 80460482 + 80460462 80460502 41 GGCCCATGGGACAGATGAAACCTGATGACTGTGAGTGACCG GGCCCATGGGACAGATGAAACATGATGACTGTGAGTGACCG < 41bp 0.504378558784403 0.763091485367634 0.16486368 0.17340049 prediction 0.517425853166462 Functional Gain - FAH ENSG00000103876 CDS Human protein_coding chr15:80460482 chr15:80460483 nonsynonymous SNV 0.755 4 22 hm5C_associated_SNPs_106722 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:80460475-80460500
64251 chr1 162569129 162569129 1 + T C rs147708415 162569127 + 162569107 162569147 41 TCATCGATGAGAATGGAGTTCATGAGCTGGTGAAAAATGGT TCATCGATGAGAATGGAGTTCACGAGCTGGTGAAAAATGGT < 41bp 0.505304006182561 0.764011807580093 0.06437802 0.09796211 prediction 0.517415602795064 Functional Gain - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162569127 chr1:162569129 synonymous SNV . 0 23 hm5C_associated_SNPs_106724 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:162569102-162569140
64251 chr6 107955660 107955660 1 + C T SKCM 107955659 + 107955639 107955679 41 GTGCCCCTACCGGTGCCCATCCCCATCCCCATCCCTATCCC GTGCCCCTACCGGTGCCCATCTCCATCCCCATCCCTATCCC < 41bp 0.530564542884635 0.789259556702693 0.30696177 0.9717873 prediction 0.517390027636117 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107955659 chr6:107955660 nonsynonymous SNV 0.964 4 22 hm5C_associated_SNPs_106726 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:107955653-107955694
64251 chr5 36153040 36153040 1 + T G SKCM 36153038 + 36153018 36153058 41 CCCCAGGAACTGCTCTCAAACCTGGGCCACCCGGAGAGCCC CCCCAGGAACTGCTCTCAAACCGGGGCCACCCGGAGAGCCC < 41bp 0.623503057707449 0.882197768382367 0.43081275 0.90606093 prediction 0.517389421349835 Functional Gain - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36153038 chr5:36153040 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_106727 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:36153025-36153064
64251 chr1 107600578 107600578 1 + C G SARC 107600577 + 107600557 107600597 41 GCAAGTAGGGGGAATATCTCCCCCTTTTCCCTCATAGCCTC GCAAGTAGGGGGAATATCTCCGCCTTTTCCCTCATAGCCTC < 41bp 0.573217194869294 0.831905308675251 0.023917377 0.047438085 prediction 0.517376227611912 Functional Gain - PRMT6 ENSG00000198890 UTR3 Human protein_coding chr1:107600577 chr1:107600578 . . 0 22 hm5C_associated_SNPs_106729 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:107600566-107600593
64251 chr10 13234478 13234478 1 + T C UCEC 13234476 + 13234456 13234496 41 ATGGGGAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTC ATGGGGAGCCCAAAACCAGCCACCAAGTCCATCTCGGCCTC < 41bp 0.552576624664741 0.811259203772158 0.08716372 0.11318478 prediction 0.517365158214835 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13234476 chr10:13234478 nonsynonymous SNV 0.645 1 23 hm5C_associated_SNPs_106730 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:13234463-13234496
64251 chr11 3829822 3829822 1 + C G rs558862497 3829821 + 3829801 3829841 41 GACCAGCCCGCAGAGCCAGCCCCCGACCCCGGGCCACCTGG GACCAGCCCGCAGAGCCAGCCGCCGACCCCGGGCCACCTGG < 41bp 0.48524286215735 0.758675756001641 0.274096 0.8798712 prediction 0.517351512003283 Functional Gain - PGAP2 ENSG00000148985 UTR5 Human protein_coding chr11:3829821 chr11:3829822 . . 0 22 hm5C_associated_SNPs_106731 0 0 1 DDX3X POSTAR2 ENCODE chr11:3829791-3829838
64251 chr1 52798480 52798480 1 + C A SARC 52798476 + 52798456 52798496 41 ACAAGTCCAATGAGCATGTCCTGGCAGGAGGTGCCTGCTTC ACAAGTCCAATGAGCATGTCCTGGAAGGAGGTGCCTGCTTC < 41bp 0.343640104036627 0.758669538283404 0.055726618 0.06336784 prediction 0.517339076566807 Functional Gain - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52798476 chr1:52798480 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_106732 0 0 3 LIN28A POSTAR2 GSE39873,GSM980594 chr1:52798460-52798480
64251 chr9 2039706 2039706 1 + C T SKCM 2039705 + 2039685 2039725 41 TGGCCCGAGGCCAGCCCCTCCCCGAAACGCTGCAGCTTGCA TGGCCCGAGGCCAGCCCCTCCTCGAAACGCTGCAGCTTGCA < 41bp 0.498721141170727 0.758664314997243 0.25845474 0.9183987 prediction 0.517328629994485 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2039705 chr9:2039706 nonsynonymous SNV 0.835 4 22 hm5C_associated_SNPs_106733 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:2039705-2039706
64251 chr20 13251388 13251388 1 + C G rs75146235 13251387 + 13251367 13251407 41 AATGGGCAGAATCCAAATATCCAGGTAATTCTTGGCACCTG AATGGGCAGAATCCAAATATCGAGGTAATTCTTGGCACCTG < 41bp 0.58297310560805 0.841576744925721 0.88096976 0.91883147 prediction 0.517207278635341 Functional Gain - ISM1 ENSG00000101230 CDS Human protein_coding chr20:13251387 chr20:13251388 nonsynonymous SNV 0.992 3 22 hm5C_associated_SNPs_106741 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:13251361-13251390
64251 chr14 89039278 89039278 1 + C G rs548038372 89039277 + 89039257 89039297 41 AAACAGGACGTTTGTGTGAACCAGAGGTGCTTAACAGCTTA AAACAGGACGTTTGTGTGAACGAGAGGTGCTTAACAGCTTA < 41bp 0.572901741612094 0.831497762503491 0.7036922 0.7324044 prediction 0.517192041782794 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89039277 chr14:89039278 nonsynonymous SNV 0.985 1 22 hm5C_associated_SNPs_106742 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:89039215-89039309
64251 chrX 48682427 48682427 1 + T A LUAD 48682423 + 48682403 48682443 41 AGGCCTAGACGTGACCCAACCTTGTGGGGACTGTGGAACAA AGGCCTAGACGTGACCCAACCTTGAGGGGACTGTGGAACAA < 41bp 0.439246097248848 0.758586837486831 0.0651876 0.105122715 prediction 0.517173674973662 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48682423 chrX:48682427 stopgain 0.932 1 25 hm5C_associated_SNPs_106744 0 0 3 BUD13 POSTAR2 ENCODE chrX:48682375-48682472
64251 chr15 44695169 44695169 1 + T C PAAD 44695167 + 44695147 44695187 41 TATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGA TATAATGGGGATGATGGTAACGCAGGTGAGTATGAGGCAGA < 41bp 0.496049996017479 0.758584301588646 0.82146007 0.6573588 prediction 0.517168603177292 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44695167 chr15:44695169 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_106745 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:44695168-44695206
64251 chr6 4892568 4892568 1 + C G LUSC 4892564 + 4892544 4892584 41 CCACTAGTGCCTCAGGTGCCCGGCCCTGTGACTGCAGCCAT CCACTAGTGCCTCAGGTGCCCGGCGCTGTGACTGCAGCCAT < 41bp 0.537570806344997 0.796119131862952 0.23470354 0.7756275 prediction 0.51709665103591 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892564 chr6:4892568 nonsynonymous SNV 0.066 1 25 hm5C_associated_SNPs_106748 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:4892556-4892583
64251 chr17 57287460 57287460 1 + C G rs375060156 57287459 + 57287439 57287479 41 CCTTCTAATGGGAGCATCAGCCTGGATGGGCTCTGAAAGTC CCTTCTAATGGGAGCATCAGCGTGGATGGGCTCTGAAAGTC < 41bp 0.583998773788257 0.842529732458697 0.61791384 0.8381176 prediction 0.517061917340879 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287459 chr17:57287460 synonymous SNV . 0 22 hm5C_associated_SNPs_106752 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:57287460-57287480
64251 chr8 146228262 146228262 1 - A C rs7823346 146228264 - 146228244 146228284 41 GGCATTTCCGGCCCAGGGGGCTTGGCTCCCCGCGGCACGGG GGCATTTCCGGCCCAGGGGGCTGGGCTCCCCGCGGCACGGG < 41bp 0.435718739965496 0.758527875449382 0.676002 0.88158333 prediction 0.517055750898765 Functional Gain - ZNF252P;ZNF252P-AS1 ENSG00000196922;ENSG00000255559 ncRNA_exonic Human other chr8:146228264 chr8:146228262 . . 0 23 hm5C_associated_SNPs_106753 0 0 3 DDX3X POSTAR2 ENCODE chr8:146228241-146228280
64251 chr6 109578931 109578931 1 + C A SARC 109578927 + 109578907 109578947 41 AGCTGGCCCTGGACCTGTGGCTCACCCCAGCCACGCCTGAG AGCTGGCCCTGGACCTGTGGCTCAACCCAGCCACGCCTGAG < 41bp 0.325139064877726 0.758486350628799 0.051464766 0.47994924 prediction 0.516972701257597 Functional Gain - C6orf183 ENSG00000243587;ENSG00000233908 intergenic Human other chr6:109578927 chr6:109578931 . . 0 25 hm5C_associated_SNPs_106757 0 0 2 GRWD1 POSTAR2 ENCODE chr6:109578809-109578949
64251 chr9 34241773 34241773 1 + C G KIRC 34241772 + 34241752 34241792 41 TGAAAAGATGTCACTGTCTTCCAAAGTGTCCCTCCCCCCTA TGAAAAGATGTCACTGTCTTCGAAAGTGTCCCTCCCCCCTA < 41bp 0.581742440571707 0.840226926673913 0.21081853 0.4530918 prediction 0.516968972204412 Functional Gain - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241772 chr9:34241773 synonymous SNV . 0 22 hm5C_associated_SNPs_106758 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr9:34241753-34241777
64251 chr16 691854 691854 1 + C G rs563804891 691853 + 691833 691873 41 GTGTCCGGGGTCAGCCCGAGCCCGTGCGGGCCCTTTAAGGG GTGTCCGGGGTCAGCCCGAGCGCGTGCGGGCCCTTTAAGGG < 41bp 0.546736208295273 0.805205482672496 0.26393044 0.4691277 prediction 0.516938548754447 Functional Gain - MCRIP2 ENSG00000172366 UTR5 Human protein_coding chr16:691853 chr16:691854 . . 0 22 hm5C_associated_SNPs_106762 0 0 1 DDX3X POSTAR2 ENCODE chr16:691838-691913
64251 chr19 52447841 52447841 1 + T G rs140416846 52447838 + 52447818 52447858 41 GGGGAGAAACCTCATGGATGCAGTATATGTGGGAAAGCCTT GGGGAGAAACCTCATGGATGCAGGATATGTGGGAAAGCCTT < 41bp 0.651922673610099 0.910386882683272 0.37022823 0.90219903 prediction 0.516928418146344 Functional Gain - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52447838 chr19:52447841 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_106764 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52447837-52447864
64251 chr21 45502741 45502741 1 + T C COAD 45502739 + 45502719 45502759 41 CATTTTGATCCCTCCAATGCCGTGGTCCACGTGGGCGGCGT CATTTTGATCCCTCCAATGCCGCGGTCCACGTGGGCGGCGT < 41bp 0.506013175064855 0.764459172555646 0.5005946 0.71293443 prediction 0.516891994981582 Functional Gain - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45502739 chr21:45502741 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_106765 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr21:45502719-45502745
64251 chr2 233321772 233321772 1 + C A KIRC 233321768 + 233321748 233321788 41 AGGTCATCTCCGTGATGAACCGGGCCAAGCAAGCAGGTGAG AGGTCATCTCCGTGATGAACCGGGACAAGCAAGCAGGTGAG < 41bp 0.654269412007153 0.912692049972246 0.87062275 0.8543392 prediction 0.516845275930184 Functional Gain - ALPI ENSG00000163295 CDS Human protein_coding chr2:233321768 chr2:233321772 nonsynonymous SNV 0.968 5 25 hm5C_associated_SNPs_106767 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:233321749-233321776
64251 chr4 174292541 174292541 1 + C A LUSC 174292537 + 174292517 174292557 41 GGCCCCGGGCAACTGTGCTGCCTGCGGGAGGATGGTGAGCG GGCCCCGGGCAACTGTGCTGCCTGAGGGAGGATGGTGAGCG < 41bp 0.410284643361002 0.758392178078884 0.25305602 0.37787238 prediction 0.516784356157767 Functional Gain - SAP30 ENSG00000164105 CDS Human protein_coding chr4:174292537 chr4:174292541 synonymous SNV . 0 25 hm5C_associated_SNPs_106774 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:174292534-174292553
64251 chr3 50683670 50683670 1 + T C STAD 50683668 + 50683648 50683688 41 GCCAGTACGGCTTCCCCAATCCTGAGTGGTCAGAAGTCTCT GCCAGTACGGCTTCCCCAATCCCGAGTGGTCAGAAGTCTCT < 41bp 0.540835062944055 0.799226527084861 0.08423573 0.08184314 prediction 0.516782928281613 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683668 chr3:50683670 synonymous SNV . 0 23 hm5C_associated_SNPs_106775 0 0 1 PPIG POSTAR2 ENCODE chr3:50683633-50683712
64251 chr16 2284603 2284603 1 + T C UCEC 2284601 + 2284581 2284621 41 CAGAACGCACAGCAGGTGCACTTCAGGACACACCTGGAGGA CAGAACGCACAGCAGGTGCACTCCAGGACACACCTGGAGGA < 41bp 0.477228843393006 0.758383850787852 0.20414105 0.8801174 prediction 0.516767701575704 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2284601 chr16:2284603 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_106777 0 0 3 PPIG POSTAR2 ENCODE chr16:2284592-2284668
64251 chr17 70120362 70120362 1 + C G UCEC 70120358 + 70120338 70120378 41 ACTCCAGCTCCTACTACAGCCACGCGGCAGGCCAGGGCACC ACTCCAGCTCCTACTACAGCCACGGGGCAGGCCAGGGCACC < 41bp 0.522232399804109 0.780608798931559 0.07431704 0.24757022 prediction 0.5167527982549 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70120358 chr17:70120362 nonsynonymous SNV 0.987 2 25 hm5C_associated_SNPs_106779 0 0 5 IGF2BP1 POSTAR2 ENCODE chr17:70120251-70120405
64251 chr17 40914831 40914831 1 + T A STAD 40914827 + 40914807 40914847 41 CCTCATCCCCTTCCTCATCACTCTTGTAGTATGGAGGAGTA CCTCATCCCCTTCCTCATCACTCTAGTAGTATGGAGGAGTA < 41bp 0.426448129786635 0.758373441408111 0.040022194 0.7885536 prediction 0.516746882816223 Functional Gain - RAMP2 ENSG00000131477 CDS Human protein_coding chr17:40914827 chr17:40914831 synonymous SNV . 0 25 hm5C_associated_SNPs_106780 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:40914825-40914850
64251 chr19 54483190 54483190 1 + T G BLCA 54483188 + 54483168 54483208 41 CTGCTGCTCGGGGGTGTGTGCGTGGCGGCCTCCCGCGTCTA CTGCTGCTCGGGGGTGTGTGCGGGGCGGCCTCCCGCGTCTA < 41bp 0.642310719297998 0.900682848907694 0.9071819 0.9544258 prediction 0.516744259219391 Functional Gain - CACNG8 ENSG00000142408 CDS Human protein_coding chr19:54483188 chr19:54483190 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106781 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:54483162-54483192
64251 chr12 69234017 69234017 1 + C A rs528106904 69234013 + 69233993 69234033 41 TGGCTCACTGCAAGCTCTGCCTCCCGGGTTCGCACCATTCT TGGCTCACTGCAAGCTCTGCCTCCAGGGTTCGCACCATTCT < 41bp 0.416687045460192 0.758368434986939 0.037867367 0.89863 prediction 0.516736869973879 Functional Gain - MDM2 ENSG00000135679 UTR3 Human protein_coding chr12:69234013 chr12:69234017 . . 0 25 hm5C_associated_SNPs_106782 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69233986-69234089
64251 chr17 4701662 4701662 1 + T A STAD 4701658 + 4701638 4701678 41 CAGAGTCAGGGGTAGAGCGGCAAGTACTTTTGGGAGACCAG CAGAGTCAGGGGTAGAGCGGCAAGAACTTTTGGGAGACCAG < 41bp 0.574928837762387 0.833282408118262 0.35208014 0.36597556 prediction 0.51670714071175 Functional Gain - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701658 chr17:4701662 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_106786 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4701628-4701787
64251 chr14 24113702 24113702 1 + C G rs148351218 24113701 + 24113681 24113721 41 GAGCTGGCCCCCAAGGACATCCGGGTAAACTGCGTGGTTCC GAGCTGGCCCCCAAGGACATCGGGGTAAACTGCGTGGTTCC < 41bp 0.588390640376942 0.846740903526706 0.87844527 0.911582 prediction 0.516700526299528 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113701 chr14:24113702 nonsynonymous SNV 0.500 4 22 hm5C_associated_SNPs_106787 0 0 5 GRWD1 POSTAR2 ENCODE chr14:24113697-24113722
64251 chr6 17507504 17507504 1 + C G rs146710056 17507500 + 17507480 17507520 41 TAACATGTTTAATCATCTTTCGGCCGTCAGCGAAAGCATCC TAACATGTTTAATCATCTTTCGGCGGTCAGCGAAAGCATCC < 41bp 0.470485156245676 0.758342867734826 0.68256825 0.9177648 prediction 0.516685735469653 Functional Gain - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17507500 chr6:17507504 synonymous SNV . 0 25 hm5C_associated_SNPs_106788 0 0 1 PPIG POSTAR2 ENCODE chr6:17507504-17507546
64251 chr4 57861558 57861558 1 + C A KIRP 57861554 + 57861534 57861574 41 ACCAGTACTATATGGGTTAGCATGCTGGCAAGAGGAGGACA ACCAGTACTATATGGGTTAGCATGATGGCAAGAGGAGGACA < 41bp 0.355227242531949 0.758333041952215 0.36542803 0.34383482 prediction 0.51666608390443 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57861554 chr4:57861558 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_106790 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr4:57861540-57861560
64251 chr9 131767451 131767451 1 + C G UCEC 131767447 + 131767427 131767467 41 TCAACCTGGGTTACTTGTGCCAGGCATGTACCTCTCTCCTG TCAACCTGGGTTACTTGTGCCAGGGATGTACCTCTCTCCTG < 41bp 0.473557777482002 0.758331833079783 0.8647391 0.9198091 prediction 0.516663666159565 Functional Gain - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131767447 chr9:131767451 nonsynonymous SNV 0.953 1 25 hm5C_associated_SNPs_106791 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr9:131767440-131767460
64251 chr19 4207920 4207920 1 + C G LUAD 4207916 + 4207896 4207936 41 GCCCTGGCGGGGGACAAACTCATCCTGCACCTTCTGCAAGA GCCCTGGCGGGGGACAAACTCATCGTGCACCTTCTGCAAGA < 41bp 0.537396157574881 0.795714151675181 0.23968449 0.11179504 prediction 0.5166359882006 Functional Gain - ANKRD24 ENSG00000089847 CDS Human protein_coding chr19:4207916 chr19:4207920 nonsynonymous SNV 0.427 0 25 hm5C_associated_SNPs_106792 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:4207908-4207931
64251 chr1 29070128 29070128 1 + T C STAD 29070126 + 29070106 29070146 41 CTGGATGCTGCTTATCGTTCCATGAACGGGAAAGGCCCCGT CTGGATGCTGCTTATCGTTCCACGAACGGGAAAGGCCCCGT < 41bp 0.529499821588904 0.787813703062069 0.053208828 0.04353136 prediction 0.516627762946331 Functional Gain - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29070126 chr1:29070128 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_106793 0 0 9 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:29070100-29070160
64251 chr1 156169976 156169976 1 + T G PAAD 156169973 + 156169953 156169993 41 CCAGAGTAACACAGTCAAATCACTGGTGGCTGGTGGCTCAG CCAGAGTAACACAGTCAAATCACGGGTGGCTGGTGGCTCAG < 41bp 0.656525073263968 0.914802717830722 0.58590645 0.90374213 prediction 0.516555289133508 Functional Gain - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156169973 chr1:156169976 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_106797 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156169960-156169980
64251 chr3 136016911 136016911 1 + C A UCEC 136016910 + 136016890 136016930 41 CCGTCCGTGAGTGCCACGATCCCAGGTGGGTTGTAGGCCGG CCGTCCGTGAGTGCCACGATCACAGGTGGGTTGTAGGCCGG < 41bp 0.498555093429254 0.7582711952879 0.260965 0.6121859 prediction 0.516542390575801 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:136016910 chr3:136016911 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_106800 0 0 6 DDX24 POSTAR2 ENCODE chr3:136016845-136016930
64251 chr12 132241053 132241053 1 + T G LUSC 132241050 + 132241030 132241070 41 CCAGAAGAGGCTCCCACAGACTCTGCTCCCGAGAAGCCAAG CCAGAAGAGGCTCCCACAGACTCGGCTCCCGAGAAGCCAAG < 41bp 0.359975263574015 0.758266754123619 0.040130883 0.05509317 prediction 0.516533508247238 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132241050 chr12:132241053 synonymous SNV . 0 24 hm5C_associated_SNPs_106802 0 0 1 UCHL5 POSTAR2 ENCODE chr12:132241042-132241133
64251 chr19 19606629 19606629 1 + T C STAD 19606627 + 19606607 19606647 41 GGTCCGAGGTGGGCAGCAGGCGTCCTCGAAGCTGGGGCCAC GGTCCGAGGTGGGCAGCAGGCGCCCTCGAAGCTGGGGCCAC < 41bp 0.501752469551986 0.760018730787966 0.5769452 0.4171575 prediction 0.51653252247196 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19606627 chr19:19606629 nonsynonymous SNV 0.652 1 23 hm5C_associated_SNPs_106803 0 0 7 FXR2 POSTAR2 GSE39682,GSM977620 chr19:19606620-19606640
64251 chr16 56866245 56866245 1 + C T LGG 56866244 + 56866224 56866264 41 TGACGACGATGGCACCAGCTCCCCACAAGACAGGCTCACTC TGACGACGATGGCACCAGCTCTCCACAAGACAGGCTCACTC < 41bp 0.555341879273685 0.813604872374483 0.05860862 0.92192936 prediction 0.516525986201597 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56866244 chr16:56866245 synonymous SNV . 0 22 hm5C_associated_SNPs_106804 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:56866231-56866273
64251 chr6 26021096 26021096 1 + C G LUSC 26021092 + 26021072 26021112 41 ACTATCATGCCCAAGGACATCCAGCTCGCCCGCCGCATCCG ACTATCATGCCCAAGGACATCCAGGTCGCCCGCCGCATCCG < 41bp 0.52354380003422 0.781799080015453 0.13275382 0.47905174 prediction 0.516510559962466 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26021092 chr6:26021096 nonsynonymous SNV 0.751 2 25 hm5C_associated_SNPs_106807 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:26021073-26021108
64251 chr3 150127539 150127539 1 + C G rs61734436 150127535 + 150127515 150127555 41 TTCGGCCCCCGCCCCCGGAGCACCCGGCGGCCCCCAGCTCG TTCGGCCCCCGCCCCCGGAGCACCGGGCGGCCCCCAGCTCG < 41bp 0.561761910094799 0.819970241743309 0.18858436 0.5732993 prediction 0.516416663297021 Functional Gain - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127535 chr3:150127539 synonymous SNV . 0 25 hm5C_associated_SNPs_106811 0 0 1 RBM15 POSTAR2 ENCODE chr3:150127508-150127557
64251 chr11 640502 640502 1 + T G rs74991942 640500 + 640480 640520 41 GCGGCTGGTCAGCGCCGTCACCTGGCTGGGCTACGTCAACA GCGGCTGGTCAGCGCCGTCACCGGGCTGGGCTACGTCAACA < 41bp 0.601348403901099 0.859551530454452 0.15757579 0.86894274 prediction 0.516406253106705 Functional Gain - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640500 chr11:640502 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106813 0 0 3 CSTF2T POSTAR2 ENCODE chr11:640481-640510
64251 chr17 79637319 79637319 1 + C A SKCM 79637315 + 79637295 79637335 41 GGGAGAGGAGCCCGACATCGCAGTCCCCAAGTTCAAACAGA GGGAGAGGAGCCCGACATCGCAGTACCCAAGTTCAAACAGA < 41bp 0.355495445153562 0.758184407024784 0.32471216 0.34128243 prediction 0.516368814049568 Functional Gain - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79637315 chr17:79637319 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_106818 0 0 9 GRWD1 POSTAR2 ENCODE chr17:79637259-79637324
64251 chrX 70444443 70444443 1 + C A rs113014279 70444439 + 70444419 70444459 41 CCAGGCAACCTCCCATCCCACCCCCGACCCTGCCCTGGGCG CCAGGCAACCTCCCATCCCACCCCAGACCCTGCCCTGGGCG < 41bp 0.349386543049935 0.758182211752087 0.07312155 0.07888678 prediction 0.516364423504174 Functional Gain - BCYRN1 ENSG00000169562 UTR3 Human protein_coding chrX:70444439 chrX:70444443 . . 0 25 hm5C_associated_SNPs_106819 1 0 3 LARP4 POSTAR2 ENCODE chrX:70444365-70444501
64251 chr6 28193085 28193085 1 + C G rs527628225 28193084 + 28193064 28193104 41 CTGCCCGGCCATTGTTCGTGCCGCGCTTCTAGCAACGCCGG CTGCCCGGCCATTGTTCGTGCGGCGCTTCTAGCAACGCCGG < 41bp 0.552848711916429 0.810904594188958 0.27136886 0.66591334 prediction 0.516111764545059 Functional Gain - ZSCAN9 ENSG00000137185 UTR5 Human protein_coding chr6:28193084 chr6:28193085 . . 0 22 hm5C_associated_SNPs_106837 0 0 1 DDX3X POSTAR2 ENCODE chr6:28193071-28193153
64251 chr17 4686436 4686436 1 + C G rs199835269 4686435 + 4686415 4686455 41 CCTCACTGAGGCTCCACTGACCGCCGGGTTACACCTGCTCC CCTCACTGAGGCTCCACTGACGGCCGGGTTACACCTGCTCC < 41bp 0.465780955419014 0.75804004920772 0.4053605 0.88538986 prediction 0.516080098415439 Functional Gain - TM4SF5 ENSG00000142484 UTR3 Human protein_coding chr17:4686435 chr17:4686436 . . 0 22 hm5C_associated_SNPs_106839 0 0 1 LARP4 POSTAR2 ENCODE chr17:4686415-4686441
64251 chr3 52246435 52246435 1 + T C LAML 52246433 + 52246413 52246453 41 CCCAGATGATGAACTACTTCCTTGGTGAGTACCTGGGGAGC CCCAGATGATGAACTACTTCCTCGGTGAGTACCTGGGGAGC < 41bp 0.513984564118399 0.772011657717676 0.5235168 0.44819072 prediction 0.516054187198553 Functional Gain - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52246433 chr3:52246435 synonymous SNV . 0 23 hm5C_associated_SNPs_106840 0 0 2 PRPF8 POSTAR2 ENCODE chr3:52246433-52246481
64251 chr6 33402968 33402968 1 + T G OV 33402966 + 33402946 33402986 41 GCTTTAAGGAGTCACACTCTCATGAGTCCTTGCTGAGTCCT GCTTTAAGGAGTCACACTCTCAGGAGTCCTTGCTGAGTCCT < 41bp 0.621734148909747 0.879746313382209 0.253647 0.9352283 prediction 0.516024328944924 Functional Gain - SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33402966 chr6:33402968 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_106844 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33402963-33402988
64251 chr3 31674613 31674613 1 + C T SKCM 31674612 + 31674592 31674632 41 CCTCGAGTCACCAACATTTTCCCAAAACAGAAGTATTTGTC CCTCGAGTCACCAACATTTTCTCAAAACAGAAGTATTTGTC < 41bp 0.511900877120134 0.769900436224251 0.047498494 0.07950258 prediction 0.515999118208234 Functional Gain - STT3B ENSG00000163527 CDS Human protein_coding chr3:31674612 chr3:31674613 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_106848 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:31674598-31674621
64251 chr4 1374774 1374774 1 + C G rs28522910 1374773 + 1374753 1374793 41 AGCTGCAGAAGCAGGAGCGCCCGGGTAGGTCTGGGCAAGGC AGCTGCAGAAGCAGGAGCGCCGGGGTAGGTCTGGGCAAGGC < 41bp 0.587593668486198 0.845566967903763 0.7876622 0.8875164 prediction 0.515946598835129 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1374773 chr4:1374774 nonsynonymous SNV 0.008 2 22 hm5C_associated_SNPs_106852 0 0 1 PPIG POSTAR2 ENCODE chr4:1374681-1374775
64251 chr17 46972655 46972655 1 + C A GBM 46972651 + 46972631 46972671 41 TGGTGTGGCTGGTTCAGGGGCTGGCATTGGAACCGTGTTTG TGGTGTGGCTGGTTCAGGGGCTGGAATTGGAACCGTGTTTG < 41bp 0.666037114734971 0.924008576980885 0.2754212 0.41895628 prediction 0.515942924491829 Functional Gain - ATP5G1 ENSG00000159199 CDS Human protein_coding chr17:46972651 chr17:46972655 synonymous SNV . 0 25 hm5C_associated_SNPs_106853 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:46972632-46972679
64251 chr14 23239013 23239013 1 + C G LUAD 23239012 + 23238992 23239032 41 TTTTCCAGGTACAGTCTTTGCCCGCTGCCTGATTTTTCCTC TTTTCCAGGTACAGTCTTTGCGCGCTGCCTGATTTTTCCTC < 41bp 0.445556972041167 0.757963781025437 0.041772217 0.043050498 prediction 0.515927562050873 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239012 chr14:23239013 synonymous SNV . 0 22 hm5C_associated_SNPs_106854 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:23238997-23239035
64251 chr16 90110304 90110304 1 + C G rs3743819 90110303 + 90110283 90110323 41 CGGGAACGGGCAGGCAGCCTCCCGCTGCCAGTCTTCGCTCT CGGGAACGGGCAGGCAGCCTCGCGCTGCCAGTCTTCGCTCT < 41bp 0.580965210040641 0.838913852302211 0.29902396 0.71498615 prediction 0.515897284523141 Functional Gain - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90110303 chr16:90110304 . . 0 22 hm5C_associated_SNPs_106858 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:90110288-90110326
64251 chr5 179193073 179193073 1 + C A PAAD 179193072 + 179193052 179193092 41 ATTCCACACCTCTGGTCAGCCCCGGGCGGACAATCCCAGTC ATTCCACACCTCTGGTCAGCCACGGGCGGACAATCCCAGTC < 41bp 0.504052224888282 0.761995159717965 0.05053559 0.20472613 prediction 0.515885869659366 Functional Gain - MAML1 ENSG00000161021 CDS Human protein_coding chr5:179193072 chr5:179193073 synonymous SNV . 0 22 hm5C_associated_SNPs_106859 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:179193020-179193099
64251 chr3 69987151 69987151 1 + C T STAD 69987150 + 69987130 69987170 41 CGGTGCCGGGGAGCAGCGCACCCAACAGCCCCATGGCTATG CGGTGCCGGGGAGCAGCGCACTCAACAGCCCCATGGCTATG < 41bp 0.510954187343817 0.76888332714993 0.10324994 0.16477883 prediction 0.515858279612227 Functional Gain - MITF ENSG00000187098 CDS Human protein_coding chr3:69987150 chr3:69987151 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_106861 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:69986984-69987168
64251 chr16 88061163 88061163 1 + C T COAD 88061162 + 88061142 88061182 41 CAGAGCATCGACTCCAAGTGCCGCACGGCGTGGCGGCGCAA CAGAGCATCGACTCCAAGTGCTGCACGGCGTGGCGGCGCAA < 41bp 0.501152176352119 0.759076625230876 0.10087192 0.144036 prediction 0.515848897757515 Functional Gain - BANP ENSG00000172530 CDS Human protein_coding chr16:88061162 chr16:88061163 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_106863 0 0 1 IGF2BP2 POSTAR2 ENCODE chr16:88061105-88061215
64251 chr12 104473259 104473259 1 + T C UCEC 104473257 + 104473237 104473277 41 TTTATGAGTTGGAGCTACAGCATGGCTCTGGTGTTGTGGGT TTTATGAGTTGGAGCTACAGCACGGCTCTGGTGTTGTGGGT < 41bp 0.49216563720658 0.757916506966344 0.0973168 0.11395216 prediction 0.515833013932688 Functional Gain - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104473257 chr12:104473259 synonymous SNV . 0 23 hm5C_associated_SNPs_106866 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:104473256-104473290
64251 chr6 43041648 43041648 1 + T C KIRP 43041646 + 43041626 43041666 41 GTTTTCCATTGTAGCAGCAACATGAAGCGAGCAGCCTCCTT GTTTTCCATTGTAGCAGCAACACGAAGCGAGCAGCCTCCTT < 41bp 0.510300693570148 0.768167900060207 0.09210494 0.110260874 prediction 0.515734412980118 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43041646 chr6:43041648 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_106877 0 0 1 PPIG POSTAR2 ENCODE chr6:43041647-43041702
64251 chr10 99995212 99995212 1 + T C LUAD 99995210 + 99995190 99995230 41 GCGTTGGGTATTAAACACACCATGGTGAAGATTCGTCCCTT GCGTTGGGTATTAAACACACCACGGTGAAGATTCGTCCCTT < 41bp 0.509948898242823 0.767799762349526 0.036452204 0.038871914 prediction 0.515701728213405 Functional Gain - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99995210 chr10:99995212 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_106880 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr10:99995192-99995213
64251 chr11 6415726 6415726 1 + T G GBM 6415724 + 6415704 6415744 41 CGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCC CGCCCTGCCGTCTGGCTACTCTGTGTGCCCAGCTCTCTGCC < 41bp 0.415218880061198 0.757848579998993 0.17650858 0.16317749 prediction 0.515697159997987 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6415724 chr11:6415726 synonymous SNV . 0 23 hm5C_associated_SNPs_106881 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:6415726-6415764
64251 chr17 14204888 14204888 1 + T A rs200257944 14204884 + 14204864 14204904 41 CTTGCCTCGATGTCCCCGGCCGGCTCCTACCGCAGCCGCCG CTTGCCTCGATGTCCCCGGCCGGCACCTACCGCAGCCGCCG < 41bp 0.580049656029207 0.837891179840444 0.35615718 0.14500299 prediction 0.515683047622474 Functional Gain - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14204884 chr17:14204888 nonsynonymous SNV 0.979 1 25 hm5C_associated_SNPs_106884 0 0 2 DDX3X POSTAR2 ENCODE chr17:14204860-14204922
64251 chr2 190531044 190531044 1 + C G LUAD 190531040 + 190531020 190531060 41 ACACTTGAGGGGTGTTTTGACTACCCAGCCTGTGGAAGATG ACACTTGAGGGGTGTTTTGACTACGCAGCCTGTGGAAGATG < 41bp 0.488664154428419 0.757838162657681 0.03798178 0.05429682 prediction 0.515676325315362 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531040 chr2:190531044 synonymous SNV . 0 25 hm5C_associated_SNPs_106885 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr2:190531033-190531072
64251 chr3 45637154 45637154 1 + C A UCEC 45637150 + 45637130 45637170 41 CCGCAGCAGCGAGAAGCCAACAGGCCTTTGGTCCACTGCCT CCGCAGCAGCGAGAAGCCAACAGGACTTTGGTCCACTGCCT < 41bp 0.64928226688214 0.907051730220351 0.88605386 0.8927994 prediction 0.515538926676423 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637150 chr3:45637154 synonymous SNV . 0 25 hm5C_associated_SNPs_106896 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:45637140-45637160
64251 chr15 67483039 67483039 1 + C G rs111695641 67483038 + 67483018 67483058 41 TCTGAAACACACGAGCAAACCCAGAGGTGGATGTTATGAAC TCTGAAACACACGAGCAAACCGAGAGGTGGATGTTATGAAC < 41bp 0.573817534590709 0.831579972710679 0.4176969 0.4550613 prediction 0.515524876239939 Functional Gain - SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67483038 chr15:67483039 . . 0 22 hm5C_associated_SNPs_106899 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:67483004-67483040
64251 chr5 149357698 149357698 1 + T G UCEC 149357695 + 149357675 149357715 41 TTGGGTACCTCCCGTCACATCTCTGTGGGCATTTTTGGAGT TTGGGTACCTCCCGTCACATCTCGGTGGGCATTTTTGGAGT < 41bp 0.380904394141843 0.757754934825663 0.03937015 0.3770484 prediction 0.515509869651327 Functional Gain - SLC26A2 ENSG00000155850 CDS Human protein_coding chr5:149357695 chr5:149357698 synonymous SNV . 0 24 hm5C_associated_SNPs_106902 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:149357678-149357699
64251 chr6 155153575 155153575 1 + C G LUSC 155153574 + 155153554 155153594 41 ACCCCAACGGGGAATCCCACCCCCATCGGTACTTGATTCAG ACCCCAACGGGGAATCCCACCGCCATCGGTACTTGATTCAG < 41bp 0.448037738460826 0.757754535373333 0.07420364 0.883654 prediction 0.515509070746665 Functional Gain - SCAF8 ENSG00000213079 CDS Human protein_coding chr6:155153574 chr6:155153575 synonymous SNV . 0 22 hm5C_associated_SNPs_106903 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:155153558-155153594
64251 chr9 131262415 131262415 1 + C A rs144331164 131262411 + 131262391 131262431 41 CTGGAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAACTA CTGGAGCAGTCCGAGAGCACCAACAGCAGCATGCAGAACTA < 41bp 0.376397519153319 0.757712637789297 0.19062072 0.16269335 prediction 0.515425275578594 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262411 chr9:131262415 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_106905 0 0 1 DGCR8 POSTAR2 ENCODE chr9:131262390-131262421
64251 chr19 38573187 38573187 1 + C G rs572885640 38573186 + 38573166 38573206 41 GCCGACGAGGGCCGGAGCCCCCCGGAAGCCAGCAGGCCGTG GCCGACGAGGGCCGGAGCCCCGCGGAAGCCAGCAGGCCGTG < 41bp 0.459521347807364 0.757708592816783 0.76215696 0.9017775 prediction 0.515417185633566 Functional Gain - SIPA1L3 ENSG00000105738 CDS Human protein_coding chr19:38573186 chr19:38573187 nonsynonymous SNV 0.879 1 22 hm5C_associated_SNPs_106907 0 0 1 BUD13 POSTAR2 ENCODE chr19:38573177-38573202
64251 chr1 46743900 46743900 1 + C A rs1048771 46743896 + 46743876 46743916 41 TGCCTGGGATGCTGCCTCCACTGCCATCACCTTCGTCTTCC TGCCTGGGATGCTGCCTCCACTGCAATCACCTTCGTCTTCC < 41bp 0.665684498661477 0.923359093274357 0.068822384 0.29249507 prediction 0.51534918922576 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46743896 chr1:46743900 synonymous SNV . 0 25 hm5C_associated_SNPs_106914 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:46743900-46743920
64251 chrX 47098764 47098764 1 + C G SKCM 47098760 + 47098740 47098780 41 CGCCCCACAGATGAGATAAACTGGCGCCTCAAGGAGGGACT CGCCCCACAGATGAGATAAACTGGGGCCTCAAGGAGGGACT < 41bp 0.56426281628002 0.821930418943902 0.90860736 0.93054986 prediction 0.515335205327764 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47098760 chrX:47098764 nonsynonymous SNV 0.923 0 25 hm5C_associated_SNPs_106916 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:47098753-47098785
64251 chr17 18110256 18110256 1 + C T CESC 18110255 + 18110235 18110275 41 CTGAAACCCAAGCGGTCCCACCGCAAGGCAGACCCTGATGC CTGAAACCCAAGCGGTCCCACTGCAAGGCAGACCCTGATGC < 41bp 0.518619208248045 0.776282196892847 0.0645636 0.082157284 prediction 0.515325977289605 Functional Gain - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18110255 chr17:18110256 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_106917 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:18110195-18110257
64251 chr16 68087509 68087509 1 + T A BRCA 68087505 + 68087485 68087525 41 ACTTTGTCGCCCCTGATGATCGAGTTGTCTTCCGCACCTGT ACTTTGTCGCCCCTGATGATCGAGATGTCTTCCGCACCTGT < 41bp 0.608248628709252 0.865882404495058 0.90145147 0.93241894 prediction 0.515267551571612 Functional Gain - DUS2 ENSG00000167264 CDS Human protein_coding chr16:68087505 chr16:68087509 nonsynonymous SNV 0.930 4 25 hm5C_associated_SNPs_106924 0 0 1 PPIG POSTAR2 ENCODE chr16:68087509-68087581
64251 chr20 61467564 61467564 1 + C G rs142066316 61467563 + 61467543 61467583 41 GCAGTCGAGGGGAGCTGGGCCCCAAAGGCACCCAGGGTCCC GCAGTCGAGGGGAGCTGGGCCGCAAAGGCACCCAGGGTCCC < 41bp 0.449918335601741 0.757594283656117 0.13736469 0.3616957 prediction 0.515188567312235 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467563 chr20:61467564 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_106930 2 0 1 SF3B1 POSTAR2 ENCODE chr20:61467539-61467581
64251 chr11 93530729 93530729 1 + T C STAD 93530727 + 93530707 93530747 41 AAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAG AAACAGACCTTGAGTTCCATCACGATGCCTCATCCAGCAAG < 41bp 0.55982529096971 0.817414469294052 0.11340773 0.096176416 prediction 0.515178356648683 Functional Gain - MED17 ENSG00000042429 CDS Human protein_coding chr11:93530727 chr11:93530729 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_106931 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:93530727-93530743
64251 chr19 1227946 1227946 1 + C G rs554638416 1227942 + 1227922 1227962 41 GCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGG GCCGTCCGGCGGCCCCGCCGCAGAGCAGCTGGCGGGTGTGG < 41bp 0.533873446851933 0.791451691642552 0.44038266 0.7768157 prediction 0.515156489581237 Functional Gain - STK11 ENSG00000118046 UTR3 Human protein_coding chr19:1227942 chr19:1227946 . . 0 25 hm5C_associated_SNPs_106933 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1227942-1227989
64251 chr3 20161148 20161148 1 + T G BLCA 20161146 + 20161126 20161166 41 ACAATTCAACCTCATCTTCCCTTGAGCAGCCAAACGCAGGG ACAATTCAACCTCATCTTCCCTGGAGCAGCCAAACGCAGGG < 41bp 0.622332220057154 0.879904751094425 0.06173134 0.18095133 prediction 0.515145062074542 Functional Gain - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20161146 chr3:20161148 synonymous SNV . 0 23 hm5C_associated_SNPs_106934 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:20161115-20161149
64251 chr1 41012330 41012330 1 + C A UCEC 41012326 + 41012306 41012346 41 TGCTCACATTCAATAAAATTCTGACTATGGAGAGAATCCAC TGCTCACATTCAATAAAATTCTGAATATGGAGAGAATCCAC < 41bp 0.370531108256349 0.757566337277798 0.099822134 0.108635515 prediction 0.515132674555596 Functional Gain - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41012326 chr1:41012330 nonsynonymous SNV 0.221 0 25 hm5C_associated_SNPs_106935 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:41012324-41012347
64251 chr12 4796133 4796133 1 + C A rs549509637 4796129 + 4796109 4796149 41 CATCACAGACATGAAATTGCCTCACCTGCCTGGCTTAGAAG CATCACAGACATGAAATTGCCTCAACTGCCTGGCTTAGAAG < 41bp 0.341252041367813 0.757521953876128 0.03903207 0.068908304 prediction 0.515043907752255 Functional Gain - NDUFA9 ENSG00000139180 CDS Human protein_coding chr12:4796129 chr12:4796133 nonsynonymous SNV 0.248 0 25 hm5C_associated_SNPs_106938 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:4796108-4796143
64251 chr19 35758359 35758359 1 + T G BRCA 35758356 + 35758336 35758376 41 ACGACTCGAGGGACTTCCCACGCTCCCGGGACCCCCACTAC ACGACTCGAGGGACTTCCCACGCGCCCGGGACCCCCACTAC < 41bp 0.358827644957191 0.757507834140726 0.045986235 0.19476056 prediction 0.515015668281452 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35758356 chr19:35758359 nonsynonymous SNV 0.105 0 24 hm5C_associated_SNPs_106939 0 0 10 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:35758335-35758367
64251 chr9 140507480 140507480 1 + C G rs62622789 140507479 + 140507459 140507499 41 GTAAGTTTGGGAGCCAGTTCCCGAGTGGTGACCCCTGGGGG GTAAGTTTGGGAGCCAGTTCCGGAGTGGTGACCCCTGGGGG < 41bp 0.446110594070637 0.757505692337066 0.80389327 0.9358298 prediction 0.515011384674131 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140507479 chr9:140507480 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_106942 0 0 4 BUD13 POSTAR2 ENCODE chr9:140507456-140507526
64251 chr19 56171939 56171939 1 + C T SKCM 56171938 + 56171918 56171958 41 TAAATACTGGGACGTGCCACCCCCAGGCTTTGAGCACATCA TAAATACTGGGACGTGCCACCTCCAGGCTTTGAGCACATCA < 41bp 0.526421136942516 0.783902529420775 0.009691089 0.927778 prediction 0.514962784956518 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56171938 chr19:56171939 synonymous SNV . 0 22 hm5C_associated_SNPs_106947 0 0 20 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:56171880-56171960
64251 chr6 348192 348192 1 + T G COAD 348189 + 348169 348209 41 CTGGGAGGATGCCCTGCACACCGTGCGTGCTGGGAGATCCT CTGGGAGGATGCCCTGCACACCGGGCGTGCTGGGAGATCCT < 41bp 0.352442481303963 0.757475471117808 0.08071214 0.47721046 prediction 0.514950942235616 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348189 chr6:348192 nonsynonymous SNV 0.806 5 24 hm5C_associated_SNPs_106949 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr6:348191-348192
64251 chr3 128627091 128627091 1 + C T UCEC 128627090 + 128627070 128627110 41 CTGCAGCATGCCGGCCGCATCCTGACTACCAGGATCCAGTA CTGCAGCATGCCGGCCGCATCTTGACTACCAGGATCCAGTA < 41bp 0.507397974019958 0.764866686177127 0.061311096 0.11852285 prediction 0.514937424314339 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128627090 chr3:128627091 synonymous SNV . 0 22 hm5C_associated_SNPs_106950 0 0 2 GRWD1 POSTAR2 ENCODE chr3:128627035-128627093
64251 chr17 40716744 40716744 1 + C T LUSC 40716743 + 40716723 40716763 41 CCAGGAAAGGCCAGAGCTCCCCACATGTCTCTATGTAATTG CCAGGAAAGGCCAGAGCTCCCTACATGTCTCTATGTAATTG < 41bp 0.508284819738866 0.765730000469785 0.107346326 0.8311376 prediction 0.514890361461838 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40716743 chr17:40716744 synonymous SNV . 0 22 hm5C_associated_SNPs_106953 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr17:40716727-40716752
64251 chr3 49012254 49012254 1 + C T SKCM 49012253 + 49012233 49012273 41 CCCTTCTGTCTCCTCAGTGTCCCAAGTGCAACATCTGCATT CCCTTCTGTCTCCTCAGTGTCTCAAGTGCAACATCTGCATT < 41bp 0.509155863370911 0.766599435553789 0.057480454 0.15754911 prediction 0.514887144365755 Functional Gain - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49012253 chr3:49012254 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_106954 0 0 6 BUD13 POSTAR2 ENCODE chr3:49012242-49012317
64251 chr17 16203218 16203218 1 + C A UCEC 16203217 + 16203197 16203237 41 TGTAGGGATTTCCCAGATGACCCAGGCATGCAGTGGGACAC TGTAGGGATTTCCCAGATGACACAGGCATGCAGTGGGACAC < 41bp 0.494165267610052 0.757425499827709 0.27549464 0.36669844 prediction 0.514850999655418 Functional Gain - PIGL ENSG00000108474 CDS Human protein_coding chr17:16203217 chr17:16203218 nonsynonymous SNV 0.719 3 22 hm5C_associated_SNPs_106956 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:16203217-16203218
64251 chr1 84945027 84945027 1 + T G rs187004394 84945024 + 84945004 84945044 41 AAAAGTCTAAAACGGAAAGCCGCTGCCGAAGAACTTCAGGA AAAAGTCTAAAACGGAAAGCCGCGGCCGAAGAACTTCAGGA < 41bp 0.646644265175221 0.904063169602741 0.18651724 0.3441668 prediction 0.514837808855039 Functional Gain - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84945024 chr1:84945027 synonymous SNV . 0 24 hm5C_associated_SNPs_106957 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr1:84945011-84945039
64251 chr9 38396719 38396719 1 + C A rs117820646 38396715 + 38396695 38396735 41 AGTGCTGCTGTGCTGGCTCCCGGACCTTCGTGGAAGAATCC AGTGCTGCTGTGCTGGCTCCCGGAACTTCGTGGAAGAATCC < 41bp 0.350878094141249 0.75740545272732 0.84265214 0.83349156 prediction 0.514810905454639 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396715 chr9:38396719 nonsynonymous SNV 0.605 3 25 hm5C_associated_SNPs_106958 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:38396671-38396730
64251 chr3 38182689 38182689 1 + T C UCS 38182687 + 38182667 38182707 41 AAGAAAGAGTTCCCCAGCATCCTGAGGTTCATCACTGTCTG AAGAAAGAGTTCCCCAGCATCCCGAGGTTCATCACTGTCTG < 41bp 0.520063430282102 0.777460601449771 0.18272343 0.3120107 prediction 0.514794342335338 Functional Gain - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38182687 chr3:38182689 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_106959 0 0 2 GRWD1 POSTAR2 ENCODE chr3:38182672-38182746
64251 chr4 30724748 30724748 1 + C G rs35709073 30724747 + 30724727 30724767 41 CGCAGACAGCGGTAAGAACGCCGAGATCGCCTACTCGCTGG CGCAGACAGCGGTAAGAACGCGGAGATCGCCTACTCGCTGG < 41bp 0.460373667746557 0.757394665330521 0.6987897 0.8379087 prediction 0.514789330661042 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724747 chr4:30724748 synonymous SNV . 0 22 hm5C_associated_SNPs_106961 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr4:30724740-30724760
64251 chr11 400353 400353 1 + C A CESC 400349 + 400329 400369 41 CCCAGGAACCTCAGCTCAGCCTCTCAGGCCACTCGCCAGAA CCCAGGAACCTCAGCTCAGCCTCTAAGGCCACTCGCCAGAA < 41bp 0.327757155166159 0.757384389762375 0.34596115 0.94051826 prediction 0.514768779524749 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:400349 chr11:400353 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_106963 0 0 5 BUD13 POSTAR2 ENCODE chr11:400257-400375
64251 chr3 12858760 12858760 1 + C A COAD 12858756 + 12858736 12858776 41 CCCCCGTGTGTGGACTATGCCAAACTCATCAGCCTGCTCAC CCCCCGTGTGTGGACTATGCCAAAATCATCAGCCTGCTCAC < 41bp 0.344177669689913 0.757345237816632 0.16097486 0.14772305 prediction 0.514690475633264 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858756 chr3:12858760 nonsynonymous SNV 0.316 2 25 hm5C_associated_SNPs_106966 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr3:12858754-12858766
64251 chr16 31129108 31129108 1 + C G rs201871085 31129107 + 31129087 31129127 41 GCGGCCGCTGAGGGGACCGCCCCATCCCCGGGCCGCGTCTC GCGGCCGCTGAGGGGACCGCCGCATCCCCGGGCCGCGTCTC < 41bp 0.57138176159595 0.828690886615197 0.24694616 0.36801457 prediction 0.514618250038494 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31129107 chr16:31129108 nonsynonymous SNV 0.950 0 22 hm5C_associated_SNPs_106968 0 0 8 DDX3X POSTAR2 ENCODE chr16:31129007-31129135
64251 chr1 168274383 168274383 1 + C A SKCM 168274382 + 168274362 168274402 41 TATTCGGGTCTCCGAGGACACCGGCAGGCTCCCTACCCTTC TATTCGGGTCTCCGAGGACACAGGCAGGCTCCCTACCCTTC < 41bp 0.500665949116418 0.757963499649951 0.41908693 0.39273134 prediction 0.514595101067066 Functional Gain - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168274382 chr1:168274383 synonymous SNV . 0 22 hm5C_associated_SNPs_106971 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:168274348-168274386
64251 chrX 65480022 65480022 1 + T C LUSC 65480020 + 65480000 65480040 41 TGGAGATGGTGGCCAGCAACCCTGGGACATGGCTGATGCAC TGGAGATGGTGGCCAGCAACCCCGGGACATGGCTGATGCAC < 41bp 0.483361552910911 0.757297524887482 0.5625789 0.86222076 prediction 0.514595049774964 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65480020 chrX:65480022 synonymous SNV . 0 23 hm5C_associated_SNPs_106972 0 0 2 LIN28B POSTAR2 ENCODE chrX:65479993-65480039
64251 chr17 20140865 20140865 1 + T A rs145601167 20140861 + 20140841 20140881 41 TGCTCTTGAACTCCTGACCTCAGGTGATCCCCACCTCAGCC TGCTCTTGAACTCCTGACCTCAGGAGATCCCCACCTCAGCC < 41bp 0.491838699037203 0.757280575706839 0.9161825 0.9290468 prediction 0.514561151413678 Functional Gain - SPECC1 ENSG00000263494 ncRNA_intronic Human lincRNA chr17:20140861 chr17:20140865 . . 0 25 hm5C_associated_SNPs_106975 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:20140843-20140881
64251 chr12 124220151 124220151 1 + C G LUSC 124220147 + 124220127 124220167 41 GAGATCCAGGAGGGGCTGAACACCCGCATCCAGGATCTCTA GAGATCCAGGAGGGGCTGAACACCGGCATCCAGGATCTCTA < 41bp 0.55377850051121 0.811045895746667 0.104616046 0.22491026 prediction 0.514534790470913 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124220147 chr12:124220151 nonsynonymous SNV 0.082 5 25 hm5C_associated_SNPs_106979 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:124220125-124220153
64251 chr19 46024625 46024625 1 + C A GBM 46024624 + 46024604 46024644 41 CACTTCCCACCTGGTCGGTCCCGAACGGCCCCTCCCCGGAG CACTTCCCACCTGGTCGGTCCAGAACGGCCCCTCCCCGGAG < 41bp 0.507135247204628 0.764396169208351 0.096737504 0.32782245 prediction 0.514521844007445 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46024624 chr19:46024625 nonsynonymous SNV 0.133 0 22 hm5C_associated_SNPs_106981 0 0 1 RPS3 POSTAR2 ENCODE chr19:46024583-46024655
64251 chr5 68715269 68715269 1 + C G SKCM 68715265 + 68715245 68715285 41 CAGGCGCTACGATGAGGTCCCAAGCGACCTGCCCTATCAAG CAGGCGCTACGATGAGGTCCCAAGGGACCTGCCCTATCAAG < 41bp 0.469550532215383 0.75723986395374 0.1288507 0.598951 prediction 0.51447972790748 Functional Gain - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68715265 chr5:68715269 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_106985 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:68715261-68715285
64251 chr3 128624975 128624975 1 + C A CESC 128624974 + 128624954 128624994 41 CACCCCACAGGTGTTCAGCTCCGAGGCCGCCTGGCAGTGTG CACCCCACAGGTGTTCAGCTCAGAGGCCGCCTGGCAGTGTG < 41bp 0.515424170027492 0.772659823646895 0.4637661 0.6506394 prediction 0.514471307238806 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128624974 chr3:128624975 synonymous SNV . 0 22 hm5C_associated_SNPs_106986 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:128624967-128624988
64251 chr5 137754692 137754692 1 + T G OV 137754689 + 137754669 137754709 41 TCTGGAAACGAAACTACCTTCTCTGGTGGAGGAGGACCGGC TCTGGAAACGAAACTACCTTCTCGGGTGGAGGAGGACCGGC < 41bp 0.37721505752288 0.757222355373962 0.22768325 0.17281911 prediction 0.514444710747925 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137754689 chr5:137754692 synonymous SNV . 0 24 hm5C_associated_SNPs_106988 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:137754678-137754707
64251 chr5 140476285 140476285 1 + T G CESC 140476282 + 140476262 140476302 41 AGGCTGCTGAGGGAGCGCGACGCTGCCAAGCAGAGGCTGGT AGGCTGCTGAGGGAGCGCGACGCGGCCAAGCAGAGGCTGGT < 41bp 0.374581076155351 0.757216096949554 0.080046475 0.22127336 prediction 0.514432193899108 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476282 chr5:140476285 synonymous SNV . 0 24 hm5C_associated_SNPs_106989 0 0 2 SND1 POSTAR2 ENCODE chr5:140476219-140476302
64251 chr20 61455823 61455823 1 + C T rs150148851 61455822 + 61455802 61455842 41 AAGTATCTGCCCGCCAGGTCCCCCAGGGCCCCCTGGAATGC AAGTATCTGCCCGCCAGGTCCTCCAGGGCCCCCTGGAATGC < 41bp 0.535001126985632 0.792210622602748 0.05994287 0.9498712 prediction 0.514418991234233 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61455822 chr20:61455823 synonymous SNV . 0 22 hm5C_associated_SNPs_106991 2 0 3 GRWD1 POSTAR2 ENCODE chr20:61455797-61455843
64251 chr5 137682483 137682483 1 + C A STAD 137682479 + 137682459 137682499 41 GTTCATGGCCTGTAGCCCCCCACCCCTCTCTGCTTCCTGCA GTTCATGGCCTGTAGCCCCCCACCACTCTCTGCTTCCTGCA < 41bp 0.339946093123589 0.757207728905069 0.035502523 0.043928802 prediction 0.514415457810139 Functional Gain - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137682479 chr5:137682483 synonymous SNV . 0 25 hm5C_associated_SNPs_106992 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr5:137682443-137682489
64251 chr19 30101445 30101445 1 + C T ESCA 30101444 + 30101424 30101464 41 GTCCTGGAGTACTTCACCCGCCACAAGCGCAAGGAGAAGAA GTCCTGGAGTACTTCACCCGCTACAAGCGCAAGGAGAAGAA < 41bp 0.507593945615126 0.764793292713195 0.28459692 0.50173277 prediction 0.514398694196138 Functional Gain - POP4 ENSG00000105171 CDS Human protein_coding chr19:30101444 chr19:30101445 nonsynonymous SNV 0.178 0 22 hm5C_associated_SNPs_106993 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:30101432-30101456
64251 chrX 49029519 49029519 1 + C A LUAD 49029518 + 49029498 49029538 41 TCTGCTTCAGTGCCTCCACACCAGGCTACTCCTCCCTGTCG TCTGCTTCAGTGCCTCCACACAAGGCTACTCCTCCCTGTCG < 41bp 0.50496990802231 0.762168225255693 0.8375356 0.9363687 prediction 0.514396634466765 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029518 chrX:49029519 nonsynonymous SNV 0.986 0 22 hm5C_associated_SNPs_106994 0 0 14 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49029500-49029520
64251 chr11 63963245 63963245 1 + C A SKCM 63963244 + 63963224 63963264 41 CTCCCAAAAAGGAGACCAAGCCAGAGCCAATGGAAGAAGAT CTCCCAAAAAGGAGACCAAGCAAGAGCCAATGGAAGAAGAT < 41bp 0.511474083291751 0.768662625615289 0.39001304 0.6422776 prediction 0.514377084647076 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63963244 chr11:63963245 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_106995 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:63963235-63963267
64251 chrX 11783889 11783889 1 + C G LUSC 11783885 + 11783865 11783905 41 GTGCCCCAGGCCGGGGAGAGCCAGCGTGTACTTTGTGTTTA GTGCCCCAGGCCGGGGAGAGCCAGGGTGTACTTTGTGTTTA < 41bp 0.475873088385778 0.757184879705133 0.4262005 0.9115124 prediction 0.514369759410266 Functional Gain - MSL3 ENSG00000005302 CDS Human protein_coding chrX:11783885 chrX:11783889 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_106997 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:11783858-11783891
64251 chr4 26585705 26585705 1 + C G rs369539403 26585704 + 26585684 26585724 41 TAACGCCCGCTGGAGGAGTCCCAGTGTAATAAGGTCCCGGA TAACGCCCGCTGGAGGAGTCCGAGTGTAATAAGGTCCCGGA < 41bp 0.541685061541368 0.798842354743179 0.23071751 0.31159055 prediction 0.514314586403622 Functional Gain - TBC1D19 ENSG00000109680 UTR5 Human protein_coding chr4:26585704 chr4:26585705 . . 0 22 hm5C_associated_SNPs_107000 0 0 1 NCBP2 POSTAR2 ENCODE chr4:26585677-26585819
64251 chr12 7286194 7286194 1 + T C UCEC 7286192 + 7286172 7286212 41 AGATCTGCGGCTTCCGGCTCCATGGGTCTGGGGTGCCCTTT AGATCTGCGGCTTCCGGCTCCACGGGTCTGGGGTGCCCTTT < 41bp 0.493016496879819 0.757148156895332 0.8757094 0.89264095 prediction 0.514296313790664 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7286192 chr12:7286194 synonymous SNV . 0 23 hm5C_associated_SNPs_107002 0 0 5 BUD13 POSTAR2 ENCODE chr12:7286171-7286196
64251 chr22 46693337 46693337 1 + C G rs201036893 46693336 + 46693316 46693356 41 CGCGATGAGCCTTCAGCCTGCCGGGCAGGGGACGTGAACAT CGCGATGAGCCTTCAGCCTGCGGGGCAGGGGACGTGAACAT < 41bp 0.595117855775037 0.852265811970637 0.0802671 0.40297836 prediction 0.514295912391199 Functional Gain - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46693336 chr22:46693337 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_107003 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:46693280-46693340
64251 chrX 153627725 153627725 1 + C G LUSC 153627721 + 153627701 153627741 41 CCGTACCCAAAGTCTCGCTTCTGCCGAGGTGTCCCTGGTAA CCGTACCCAAAGTCTCGCTTCTGCGGAGGTGTCCCTGGTAA < 41bp 0.464071276016941 0.757140994471392 0.10429132 0.29828474 prediction 0.514281988942784 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153627721 chrX:153627725 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_107005 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153627694-153627783
64251 chrX 54955517 54955517 1 + T G UCEC 54955515 + 54955495 54955535 41 ACACTGAGCACTAGCTCCAGCTTCAGCAGCGCAGCCAGCAT ACACTGAGCACTAGCTCCAGCTGCAGCAGCGCAGCCAGCAT < 41bp 0.427578591297118 0.757105756129611 0.040044278 0.15889913 prediction 0.514211512259222 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54955515 chrX:54955517 nonsynonymous SNV 0.004 2 23 hm5C_associated_SNPs_107006 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:54955498-54955518
64251 chr10 75533411 75533411 1 + T C UCEC 75533409 + 75533389 75533429 41 CTCAACGGCTTCGAGTGTTTCGTCTGTGACTACGAACTGGC CTCAACGGCTTCGAGTGTTTCGCCTGTGACTACGAACTGGC < 41bp 0.52473553832741 0.781823002297361 0.108225435 0.054242104 prediction 0.514174927939903 Functional Gain - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75533409 chr10:75533411 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_107009 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:75533386-75533418
64251 chr20 25187891 25187891 1 + C G LUAD 25187887 + 25187867 25187907 41 CTTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGGTGGG CTTCTTCAGCATCACCAGGGCAGCGCCGGGGGCCCGGTGGG < 41bp 0.544145705323851 0.801230757986325 0.20195013 0.26724756 prediction 0.514170105324949 Functional Gain - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187887 chr20:25187891 synonymous SNV . 0 25 hm5C_associated_SNPs_107010 0 0 4 DDX3X POSTAR2 ENCODE chr20:25187847-25187915
64251 chr2 232574963 232574963 1 + C G rs371087536 232574959 + 232574939 232574979 41 GAGCCCGGCCGACCGACGCGCGACCCGCGCGCGTGCCACTG GAGCCCGGCCGACCGACGCGCGACGCGCGCGCGTGCCACTG < 41bp 0.549488964031195 0.80657068960706 0.10427517 0.3301754 prediction 0.514163451151729 Functional Gain - PTMA ENSG00000187514 CDS Human protein_coding chr2:232574959 chr2:232574963 synonymous SNV . 0 25 hm5C_associated_SNPs_107012 0 0 7 DGCR8 POSTAR2 ENCODE chr2:232574931-232574965
64251 chr19 36120454 36120454 1 + C G LUAD 36120453 + 36120433 36120473 41 AAGTTCTGGGGGCTCCAGTACCTGGAATCCCAACTGCTGTG AAGTTCTGGGGGCTCCAGTACGTGGAATCCCAACTGCTGTG < 41bp 0.444951467238424 0.757081472375478 0.33947432 0.4548653 prediction 0.514162944750955 Functional Gain - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36120453 chr19:36120454 nonsynonymous SNV 0.980 1 22 hm5C_associated_SNPs_107013 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:36120426-36120482
64251 chr12 122620165 122620165 1 + C A rs532135984 122620161 + 122620141 122620181 41 CAAGACCCCCTGGGGAAGGGCGAGCAGGTCCCGCTGCATGG CAAGACCCCCTGGGGAAGGGCGAGAAGGTCCCGCTGCATGG < 41bp 0.36624655670933 0.757059459572092 0.27558836 0.30528092 prediction 0.514118919144183 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122620161 chr12:122620165 nonsynonymous SNV 0.992 1 25 hm5C_associated_SNPs_107016 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:122620130-122620173
64251 chr8 26505233 26505233 1 + C T STAD 26505232 + 26505212 26505252 41 AACCTTTACCCCCGGAAAGGCCGCATTGCTGTGGGATCCGA AACCTTTACCCCCGGAAAGGCTGCATTGCTGTGGGATCCGA < 41bp 0.488010577553805 0.757024684902735 0.054781497 0.04930502 prediction 0.514049369805469 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505232 chr8:26505233 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_107019 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:26505227-26505251
64251 chr4 6718548 6718548 1 + C G rs35013424 6718547 + 6718527 6718567 41 AGCCCCCGTCCTGTTTCGGACCGAAGACTACTTCCCTTGTT AGCCCCCGTCCTGTTTCGGACGGAAGACTACTTCCCTTGTT < 41bp 0.591051053237707 0.848073970698512 0.23286483 0.7294119 prediction 0.51404583492161 Functional Gain - BLOC1S4 ENSG00000186222 CDS Human protein_coding chr4:6718547 chr4:6718548 synonymous SNV . 0 22 hm5C_associated_SNPs_107020 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr4:6718524-6718582
64251 chr5 81267876 81267876 1 + C G rs543141983 81267875 + 81267855 81267895 41 TCCGACTCGGCCGTGGCGGACCTGACTGAAGGAGGCCGCGG TCCGACTCGGCCGTGGCGGACGTGACTGAAGGAGGCCGCGG < 41bp 0.5652449649462 0.82225553559661 0.37575945 0.866156 prediction 0.514021141300819 Functional Gain - ATG10 ENSG00000152348 UTR5 Human protein_coding chr5:81267875 chr5:81267876 . . 0 22 hm5C_associated_SNPs_107022 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:81267875-81267876
64251 chr17 78022497 78022497 1 + C A PRAD 78022496 + 78022476 78022516 41 CATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAG CATGGCAGAGAGAGTGGAGTCAGAGGGGAGTGACGAGGAAG < 41bp 0.524555270439136 0.78156200321814 0.6836939 0.8292029 prediction 0.514013465558008 Functional Gain - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022496 chr17:78022497 synonymous SNV . 0 22 hm5C_associated_SNPs_107023 0 0 1 PPIG POSTAR2 ENCODE chr17:78022382-78022564
64251 chr19 35512755 35512755 1 + C A GBM 35512751 + 35512731 35512771 41 TCCTGACCCCTGTGCCCGGGCCGGCATTCACACCTCGGGTA TCCTGACCCCTGTGCCCGGGCCGGAATTCACACCTCGGGTA < 41bp 0.36166456665024 0.756988825161886 0.31266063 0.38162044 prediction 0.513977650323773 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512751 chr19:35512755 synonymous SNV . 0 25 hm5C_associated_SNPs_107024 0 0 1 IGF2BP2 POSTAR2 ENCODE chr19:35512694-35512769
64251 chr12 2932026 2932026 1 + C T UCEC 2932025 + 2932005 2932045 41 ACATATATCATTGATCACAACCGCACCGTCGTCCGCTTCCA ACATATATCATTGATCACAACTGCACCGTCGTCCGCTTCCA < 41bp 0.491365851853022 0.756981507189493 0.24520391 0.30519313 prediction 0.513963014378987 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2932025 chr12:2932026 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_107025 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:2932006-2932027
64251 chr5 74655889 74655889 1 + T C UCEC 74655887 + 74655867 74655907 41 GCCCGAATTGTGTGTGGGACCGTAATGGCTGGGGAATTGTC GCCCGAATTGTGTGTGGGACCGCAATGGCTGGGGAATTGTC < 41bp 0.554660949650175 0.811639016979858 0.2679339 0.18463272 prediction 0.513956134659367 Functional Gain - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74655887 chr5:74655889 nonsynonymous SNV 0.683 3 23 hm5C_associated_SNPs_107028 0 0 12 LIN28A POSTAR2 GSE39873,GSM980593 chr5:74655880-74655900
64251 chr12 118469037 118469037 1 + T A OV 118469033 + 118469013 118469053 41 AGAAGATCCAGCTGAGCTCCCTCATTGCTGCATTTCAAGTC AGAAGATCCAGCTGAGCTCCCTCAATGCTGCATTTCAAGTC < 41bp 0.429516965799767 0.75695058953926 0.27550954 0.8292642 prediction 0.513901179078521 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118469033 chr12:118469037 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_107036 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:118469009-118469097
64251 chr4 88036209 88036209 1 + C G BLCA 88036208 + 88036188 88036228 41 GTGGTGGTCCAGGAGGACAGCCGCAAAGACAGACTCCCATT GTGGTGGTCCAGGAGGACAGCGGCAAAGACAGACTCCCATT < 41bp 0.561353736837668 0.818302941312217 0.2056582 0.28069282 prediction 0.513898408949097 Functional Gain - AFF1 ENSG00000172493 CDS Human protein_coding chr4:88036208 chr4:88036209 nonsynonymous SNV 0.066 0 22 hm5C_associated_SNPs_107037 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:88036194-88036214
64251 chr12 124146048 124146048 1 + C G rs115048185 124146044 + 124146024 124146064 41 CTAAAAATAGAAAAATTAGCCATGCGAAGTAGCAGGTGCCT CTAAAAATAGAAAAATTAGCCATGGGAAGTAGCAGGTGCCT < 41bp 0.52237972010603 0.779318620003232 0.30851096 0.56747204 prediction 0.513877799794405 Functional Gain - GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124146044 chr12:124146048 . . 0 25 hm5C_associated_SNPs_107039 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr12:124146009-124146061
64251 chr16 67116228 67116228 1 + T A BLCA 67116224 + 67116204 67116244 41 AAATGGAGGTGAGAGTTTCACAGCTGCTGGCAGTAACTGGT AAATGGAGGTGAGAGTTTCACAGCAGCTGGCAGTAACTGGT < 41bp 0.599755830059854 0.856668416737664 0.66405386 0.59471166 prediction 0.51382517335562 Functional Gain - CBFB ENSG00000067955 CDS Human protein_coding chr16:67116224 chr16:67116228 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_107041 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:67116146-67116230
64251 chr20 23350890 23350890 1 + C A UCEC 23350886 + 23350866 23350906 41 GCAGAAAATGGCCATTTCCACAACCTGGCTGCAGTCCAAGA GCAGAAAATGGCCATTTCCACAACATGGCTGCAGTCCAAGA < 41bp 0.35732124348643 0.756908007130083 0.24132568 0.19065496 prediction 0.513816014260167 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23350886 chr20:23350890 nonsynonymous SNV 0.227 3 25 hm5C_associated_SNPs_107043 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr20:23350878-23350896
64251 chr17 5280440 5280440 1 + T C rs3026101 5280438 + 5280418 5280458 41 GGGAGTTGGTATTAAAATACCGTGAGGACATCATTAATGTG GGGAGTTGGTATTAAAATACCGCGAGGACATCATTAATGTG < 41bp 0.556059847105171 0.812967510878362 0.11844146 0.15585873 prediction 0.513815327546382 Functional Gain - RABEP1 ENSG00000029725 CDS Human protein_coding chr17:5280438 chr17:5280440 synonymous SNV . 0 23 hm5C_associated_SNPs_107044 0 1 8 FMR1 POSTAR2 GSE39682,GSM977615 chr17:5280416-5280468
64251 chr1 205496967 205496967 1 + C T COAD 205496966 + 205496946 205496986 41 GGCCTCGCCTACTGTCACCACCGCAAGATCCTGCACCGGGA GGCCTCGCCTACTGTCACCACTGCAAGATCCTGCACCGGGA < 41bp 0.51151913193643 0.768422419397777 0.2925086 0.47861746 prediction 0.513806574922694 Functional Gain - CDK18 ENSG00000117266 CDS Human protein_coding chr1:205496966 chr1:205496967 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_107045 0 0 4 BUD13 POSTAR2 ENCODE chr1:205496921-205496984
64251 chr8 81399318 81399318 1 + C G rs559378427 81399317 + 81399297 81399337 41 CGCCGGCGCCGCCGAGGAAGCCAAGGAGTTGCTGCTCCCCC CGCCGGCGCCGCCGAGGAAGCGAAGGAGTTGCTGCTCCCCC < 41bp 0.57953029992225 0.836408657202953 0.66297674 0.9215714 prediction 0.513756714561407 Functional Gain - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399317 chr8:81399318 synonymous SNV . 0 22 hm5C_associated_SNPs_107052 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:81399298-81399340
64251 chr1 236711387 236711387 1 + T A UCEC 236711383 + 236711363 236711403 41 CACAGCCTGGAGTACAAACACAGATTTAAAGAGCTCAGCAG CACAGCCTGGAGTACAAACACAGAATTAAAGAGCTCAGCAG < 41bp 0.452899697922187 0.756877291544017 0.29901528 0.78695273 prediction 0.513754583088035 Functional Gain - LGALS8 ENSG00000116977 CDS Human protein_coding chr1:236711383 chr1:236711387 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_107053 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:236711380-236711401
64251 chr15 59911580 59911580 1 + C G HNSC 59911576 + 59911556 59911596 41 CGATAAGGGTGCTCCTTATGCTCCCTGCTCTGGAATCCACC CGATAAGGGTGCTCCTTATGCTCCGTGCTCTGGAATCCACC < 41bp 0.567421841630932 0.824297209907731 0.15768477 0.20447412 prediction 0.513750736553597 Functional Gain - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911576 chr15:59911580 synonymous SNV . 0 25 hm5C_associated_SNPs_107054 0 0 1 SND1 POSTAR2 ENCODE chr15:59911563-59911660
64251 chr2 74757336 74757336 1 + C G LIHC 74757335 + 74757315 74757355 41 TGTCTGTTGGGGTCACTGAACCCCGAGCATGCCTGACGTCT TGTCTGTTGGGGTCACTGAACGCCGAGCATGCCTGACGTCT < 41bp 0.527805777425795 0.78467200822121 0.3360265 0.33851713 prediction 0.513732461590829 Functional Gain - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757335 chr2:74757336 nonsynonymous SNV 0.057 0 22 hm5C_associated_SNPs_107057 0 0 4 DDX3X POSTAR2 ENCODE chr2:74757296-74757356
64251 chrX 133594186 133594186 1 + C G rs193054558 133594182 + 133594162 133594202 41 GGGGCGGGCAGAGGGCGGGGCCTGCTTCTCCTCAGCTTCAG GGGGCGGGCAGAGGGCGGGGCCTGGTTCTCCTCAGCTTCAG < 41bp 0.488242115004005 0.756865845467907 0.533002 0.44684812 prediction 0.513731690935813 Functional Gain - HPRT1 ENSG00000165704 UTR5 Human protein_coding chrX:133594182 chrX:133594186 . . 0 25 hm5C_associated_SNPs_107058 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585675 chrX:133594185-133594209
64251 chr1 161931049 161931049 1 + C G rs41271953 161931048 + 161931028 161931068 41 TAGCAGGGCCGGCAGCTCTGCCACAGAGCTAGGGGTGCCTG TAGCAGGGCCGGCAGCTCTGCGACAGAGCTAGGGGTGCCTG < 41bp 0.510982188387271 0.767827603782207 0.49332568 0.47338238 prediction 0.513690830789873 Functional Gain - ATF6 ENSG00000118217 UTR3 Human protein_coding chr1:161931048 chr1:161931049 . . 0 22 hm5C_associated_SNPs_107061 0 0 1 IGF2BP3 POSTAR2 ENCODE chr1:161930938-161931055
64251 chr8 43046629 43046629 1 + C G BRCA 43046625 + 43046605 43046645 41 GCCCCCACTCAGGAGAGGAGCTGCCTTTCTCTTCGAGACAT GCCCCCACTCAGGAGAGGAGCTGCGTTTCTCTTCGAGACAT < 41bp 0.463909356678209 0.756832744372547 0.09337747 0.15813756 prediction 0.513665488745094 Functional Gain - HGSNAT ENSG00000165102 CDS Human protein_coding chr8:43046625 chr8:43046629 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_107065 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr8:43046629-43046630
64251 chr17 17942970 17942970 1 + C A rs545188753 17942966 + 17942946 17942986 41 CCCCGCCACCCTCCTCGGCTCCCGCGCGGCGGCGGCGGTTC CCCCGCCACCCTCCTCGGCTCCCGAGCGGCGGCGGCGGTTC < 41bp 0.651186505355136 0.907985036861192 0.16766205 0.3438546 prediction 0.513597063012114 Functional Gain - GID4 ENSG00000141034 CDS Human protein_coding chr17:17942966 chr17:17942970 synonymous SNV . 0 25 hm5C_associated_SNPs_107070 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:17942950-17942984
64251 chr17 48755222 48755222 1 + C A rs34620384 48755221 + 48755201 48755241 41 AGTGTCATCCGGGCCTACAACCGCAGCCGGGATTTTGAGAT AGTGTCATCCGGGCCTACAACAGCAGCCGGGATTTTGAGAT < 41bp 0.504610792910426 0.76139239209164 0.91190696 0.83743674 prediction 0.513563198362428 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48755221 chr17:48755222 nonsynonymous SNV 0.030 4 22 hm5C_associated_SNPs_107074 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr17:48755220-48755240
64251 chr1 212209261 212209261 1 + C G PAAD 212209260 + 212209240 212209280 41 TCAATTCGGTGCTCCGCCAGCCCCAGCTTGGCGTCCTGAGA TCAATTCGGTGCTCCGCCAGCGCCAGCTTGGCGTCCTGAGA < 41bp 0.581082792630894 0.837860273283843 0.1221399 0.24483216 prediction 0.513554961305899 Functional Gain - DTL ENSG00000143476 CDS Human protein_coding chr1:212209260 chr1:212209261 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_107075 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:212209242-212209270
64251 chr10 74035068 74035068 1 + T A rs541358689 74035064 + 74035044 74035084 41 GGTTGGAAAACTGAGGCAGCCACCTAAGGTGGAGGTGGGGG GGTTGGAAAACTGAGGCAGCCACCAAAGGTGGAGGTGGGGG < 41bp 0.584420190870189 0.841169595009829 0.34342027 0.15817827 prediction 0.513498808279279 Functional Gain - DDIT4 ENSG00000269926 ncRNA_exonic Human antisense chr10:74035064 chr10:74035068 . . 0 25 hm5C_associated_SNPs_107084 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:74035045-74035099
64251 chr15 99796162 99796162 1 + C A BLCA 99796158 + 99796138 99796178 41 CGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTT CGTGCCTGATGGGATATATTCAGTAATGGCGTCCGAACTTT < 41bp 0.482229972851061 0.756744128829001 0.24312639 0.26613826 prediction 0.513488257658002 Functional Gain - LRRC28 ENSG00000168904 CDS Human protein_coding chr15:99796158 chr15:99796162 stopgain 0.997 0 25 hm5C_associated_SNPs_107085 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:99796155-99796191
64251 chr6 27513542 27513542 1 + C G rs142077479 27513538 + 27513518 27513558 41 TCCCCGCGCAGGTTCGAATCCTGCCGACTACGGTTTTACCA TCCCCGCGCAGGTTCGAATCCTGCGGACTACGGTTTTACCA < 41bp 0.487639873960146 0.756716696662043 0.5217362 0.46367502 prediction 0.513433393324086 Functional Gain - ZNF184;LINC01012 ENSG00000218347;ENSG00000219738 intergenic Human other chr6:27513538 chr6:27513542 . . 0 25 hm5C_associated_SNPs_107087 0 0 13 TARDBP POSTAR2 DRA001158,DRS012386 chr6:27513499-27513547
64251 chr17 73102104 73102104 1 + T A SKCM 73102100 + 73102080 73102120 41 GGTACTGCAGGCCAAGCAAACGGCTCTGGGCTGGAATAGCC GGTACTGCAGGCCAAGCAAACGGCACTGGGCTGGAATAGCC < 41bp 0.58882331258108 0.845539599689496 0.89060235 0.90591127 prediction 0.513432574216832 Functional Gain - SLC16A5 ENSG00000170190 CDS Human protein_coding chr17:73102100 chr17:73102104 synonymous SNV . 0 25 hm5C_associated_SNPs_107088 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73102062-73102113
64251 chr16 74339290 74339290 1 + C A UCEC 74339286 + 74339266 74339306 41 AAGCTTCTGGATATCAGGAGCTACCTGGAAAAAGTCGCCAC AAGCTTCTGGATATCAGGAGCTACATGGAAAAAGTCGCCAC < 41bp 0.342476608409422 0.756696571016819 0.056666702 0.08979955 prediction 0.513393142033638 Functional Gain - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339286 chr16:74339290 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_107093 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:74339278-74339306
64251 chr12 113725993 113725993 1 + C T UCEC 113725992 + 113725972 113726012 41 TTTAAGTTGAAGGAGCGCTACCGCAACGTGCTGGACACCAT TTTAAGTTGAAGGAGCGCTACTGCAACGTGCTGGACACCAT < 41bp 0.505900253294093 0.76258234213608 0.24227455 0.21385169 prediction 0.513364177683974 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113725992 chr12:113725993 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_107096 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:113725965-113726003
64251 chr12 53666575 53666575 1 + T G PRAD 53666572 + 53666552 53666592 41 TATGCCGAGGCCTGTGCCATCTCTGAGCCGCTCTGTCAGCA TATGCCGAGGCCTGTGCCATCTCGGAGCCGCTCTGTCAGCA < 41bp 0.368620394422678 0.756674924414146 0.14876008 0.20948991 prediction 0.513349848828292 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53666572 chr12:53666575 synonymous SNV . 0 24 hm5C_associated_SNPs_107098 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:53666545-53666599
64251 chr17 21205553 21205553 1 + T C rs529768181 21205551 + 21205531 21205571 41 TGACAATTCCAGAGGACATCCTTGGGGAGATTGCTGTGTCT TGACAATTCCAGAGGACATCCTCGGGGAGATTGCTGTGTCT < 41bp 0.531863829317212 0.788521834070159 0.098139375 0.052021295 prediction 0.513316009505894 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21205551 chr17:21205553 synonymous SNV . 0 23 hm5C_associated_SNPs_107102 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:21205537-21205559
64251 chr19 39898406 39898406 1 + C G CESC 39898402 + 39898382 39898422 41 GAGCCTCCTGTCGCTGAGCCCTGACGTGCCCGTGCCATCCG GAGCCTCCTGTCGCTGAGCCCTGAGGTGCCCGTGCCATCCG < 41bp 0.568264566272889 0.824922025098349 0.044565916 0.2312856 prediction 0.51331491765092 Functional Gain - ZFP36 ENSG00000128016 CDS Human protein_coding chr19:39898402 chr19:39898406 nonsynonymous SNV 0.285 0 25 hm5C_associated_SNPs_107103 0 0 1 BUD13 POSTAR2 ENCODE chr19:39898341-39898417
64251 chr15 29406136 29406136 1 + C T STAD 29406135 + 29406115 29406155 41 GGGGGCGTCCGTGTGGGCCACCGCATCATCGAGATCAACGG GGGGGCGTCCGTGTGGGCCACTGCATCATCGAGATCAACGG < 41bp 0.502735705798484 0.759337250909933 0.12752345 0.42070997 prediction 0.513203090222899 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29406135 chr15:29406136 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_107108 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:29406119-29406140
64251 chr3 10320651 10320651 1 + C A COAD 10320647 + 10320627 10320667 41 AGATTGCCAGAGTCAAAGATCAGCCACTCTCCCTCACCTTG AGATTGCCAGAGTCAAAGATCAGCAACTCTCCCTCACCTTG < 41bp 0.343481767247206 0.756593903686924 0.34914976 0.17370573 prediction 0.513187807373847 Functional Gain - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10320647 chr3:10320651 nonsynonymous SNV 0.741 0 25 hm5C_associated_SNPs_107111 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:10320614-10320665
64251 chr1 71512701 71512701 1 - G T STAD 71512705 - 71512685 71512725 41 TCGGCGTGTGGCTGGCCGTGCTCGCCTTCGCCCTGCTGCCG TCGGCGTGTGGCTGGCCGTGCTCGACTTCGCCCTGCTGCCG < 41bp 0.639176959319076 0.895770507205849 0.06489387 0.08121821 prediction 0.513187095773546 Functional Gain - PTGER3 ENSG00000050628 CDS Human protein_coding chr1:71512705 chr1:71512701 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_107112 0 0 2 RBM15 POSTAR2 ENCODE chr1:71512654-71512745
64251 chr8 27645446 27645446 1 + T C COAD 27645444 + 27645424 27645464 41 TCTGTGGGATCTGTCAACTTCATGAAACAGACCAATATCCA TCTGTGGGATCTGTCAACTTCACGAAACAGACCAATATCCA < 41bp 0.471969707289895 0.75658004306776 0.21026126 0.18613863 prediction 0.51316008613552 Functional Gain - ESCO2 ENSG00000171320 CDS Human protein_coding chr8:27645444 chr8:27645446 nonsynonymous SNV 0.879 0 23 hm5C_associated_SNPs_107114 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:27645415-27645447
64251 chr17 43174523 43174523 1 + C A PAAD 43174522 + 43174502 43174542 41 CCGGCCACCCGGCTGGCTCCCCCAGTGGCACTGTGGGGTTC CCGGCCACCCGGCTGGCTCCCACAGTGGCACTGTGGGGTTC < 41bp 0.514762243607955 0.771320157101731 0.37864292 0.38143486 prediction 0.513115826987551 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43174522 chr17:43174523 synonymous SNV . 0 22 hm5C_associated_SNPs_107119 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:43174520-43174540
64251 chr1 3649652 3649652 1 + C A rs368763879 3649648 + 3649628 3649668 41 GGCCGAGATCCACTGAGGGCCTCGCCTGGCTGCAGCCTGCG GGCCGAGATCCACTGAGGGCCTCGACTGGCTGCAGCCTGCG < 41bp 0.39165564416554 0.75650921543183 0.12884343 0.79823196 prediction 0.513018430863659 Functional Gain - TP73 ENSG00000078900 UTR3 Human protein_coding chr1:3649648 chr1:3649652 . . 0 25 hm5C_associated_SNPs_107127 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:3649651-3649679
64251 chr8 2040298 2040298 1 + C G rs2235122 2040297 + 2040277 2040317 41 CTACGTGGACTGCTGTGTGGCCGGAACCAACCTCTGGGAGC CTACGTGGACTGCTGTGTGGCGGGAACCAACCTCTGGGAGC < 41bp 0.594554779370604 0.851060601923615 0.77877223 0.91136795 prediction 0.513011645106021 Functional Gain - MYOM2 ENSG00000036448 CDS Human protein_coding chr8:2040297 chr8:2040298 synonymous SNV . 0 22 hm5C_associated_SNPs_107128 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:2040275-2040299
64251 chr16 4559505 4559505 1 + T C GBM 4559503 + 4559483 4559523 41 ACGATGGGAAAGGAGACATGCGTAAATGCCCTTTCTACGCT ACGATGGGAAAGGAGACATGCGCAAATGCCCTTTCTACGCT < 41bp 0.550951725156004 0.807445650957796 0.16749221 0.09407371 prediction 0.512987851603585 Functional Gain - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4559503 chr16:4559505 synonymous SNV . 0 23 hm5C_associated_SNPs_107130 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:4559500-4559520
64251 chr14 90429760 90429760 1 + C G rs35455108 90429759 + 90429739 90429779 41 ATGAGCTGCAACCAGAAATGCCGCAGAAGCAGGCTGAGAAA ATGAGCTGCAACCAGAAATGCGGCAGAAGCAGGCTGAGAAA < 41bp 0.577774317701739 0.834248409498815 0.7228105 0.90106595 prediction 0.512948183594152 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90429759 chr14:90429760 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_107133 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:90429740-90429773
64251 chr4 2695381 2695381 1 + C T SKCM 2695380 + 2695360 2695400 41 CCAGCCGCCCCGAGGAATAGCCCCACGGGCTTGGCCCCCCT CCAGCCGCCCCGAGGAATAGCTCCACGGGCTTGGCCCCCCT < 41bp 0.531418605855526 0.787821936821331 0.4771365 0.94281507 prediction 0.512806661931609 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2695380 chr4:2695381 nonsynonymous SNV 0.897 1 22 hm5C_associated_SNPs_107146 0 0 1 METAP2 POSTAR2 ENCODE chr4:2695380-2695472
64251 chr22 32880005 32880005 1 + C T UCEC 32880004 + 32879984 32880024 41 AATCGGTGGAAGGGCAAGTGCCACATTCATTAGAGACCTTG AATCGGTGGAAGGGCAAGTGCTACATTCATTAGAGACCTTG < 41bp 0.503679722881374 0.760054391000245 0.032366216 0.31790194 prediction 0.512749336237742 Functional Gain - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32880004 chr22:32880005 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_107149 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:32879960-32880016
64251 chr14 37641880 37641880 1 + C A rs1403 37641876 + 37641856 37641896 41 TTGTCTCCTAGATTGGCGCCCACGCCCTTCTCTATCAGGAG TTGTCTCCTAGATTGGCGCCCACGACCTTCTCTATCAGGAG < 41bp 0.391905143157313 0.756358517012695 0.074604005 0.08491534 prediction 0.51271703402539 Functional Gain - SLC25A21-AS1 ENSG00000183032;ENSG00000258708 UTR5;UTR3 Human other chr14:37641876 chr14:37641880 . . 0 25 hm5C_associated_SNPs_107150 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:37641880-37641881
64251 chr11 43350323 43350323 1 + C T UCEC 43350322 + 43350302 43350342 41 AGAATGCTGGTAATGAAGAACCCAAGCTACAGTTCAGTTAT AGAATGCTGGTAATGAAGAACTCAAGCTACAGTTCAGTTAT < 41bp 0.49479489424589 0.756354311058304 0.07811642 0.14825803 prediction 0.512708622116609 Functional Gain - API5 ENSG00000166181 CDS Human protein_coding chr11:43350322 chr11:43350323 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_107152 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:43350319-43350385
64251 chr1 28081734 28081734 1 + C A KIRC 28081730 + 28081710 28081750 41 TCCCCAGACCTGGCTCTGGACTCACCAGGCACTGACCACTT TCCCCAGACCTGGCTCTGGACTCAACAGGCACTGACCACTT < 41bp 0.321051415150472 0.756321971646493 0.019162834 0.09382254 prediction 0.512643943292986 Functional Gain - FAM76A ENSG00000009780 CDS Human protein_coding chr1:28081730 chr1:28081734 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_107158 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28081713-28081751
64251 chr11 48166425 48166425 1 + T G GBM 48166422 + 48166402 48166442 41 TTACAATGGGAAGCTGGAACCTCTGGGCTCCTACCGGTAAT TTACAATGGGAAGCTGGAACCTCGGGGCTCCTACCGGTAAT < 41bp 0.374850388473292 0.756319198595535 0.20205072 0.835888 prediction 0.51263839719107 Functional Gain - PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48166422 chr11:48166425 nonsynonymous SNV 0.983 2 24 hm5C_associated_SNPs_107161 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:48166410-48166431
64251 chr19 30935740 30935740 1 + C A UCEC 30935736 + 30935716 30935756 41 GCGGCATGTCCCAGGAGGCCCACGCCAACCTGTACTCCAGG GCGGCATGTCCCAGGAGGCCCACGACAACCTGTACTCCAGG < 41bp 0.340885385069165 0.756315655061629 0.1954917 0.21562591 prediction 0.512631310123258 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935736 chr19:30935740 nonsynonymous SNV 0.973 4 25 hm5C_associated_SNPs_107162 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:30935739-30935740
64251 chr12 14927594 14927594 1 + C G KIRP 14927593 + 14927573 14927613 41 GAGTACCTTACGGCGGAGATCCTGGAGCTGGCTGGCAACGC GAGTACCTTACGGCGGAGATCGTGGAGCTGGCTGGCAACGC < 41bp 0.595832955818311 0.852101596568897 0.9149715 0.93137753 prediction 0.512537281501173 Functional Gain - H2AFJ ENSG00000246705 CDS Human protein_coding chr12:14927593 chr12:14927594 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_107167 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:14927575-14927597
64251 chr19 50880053 50880053 1 + T G rs76217494 50880050 + 50880030 50880070 41 GCCATGAGCCCCGCCCCCCGCTGTTGCTTGGAGAGGGGCGG GCCATGAGCCCCGCCCCCCGCTGGTGCTTGGAGAGGGGCGG < 41bp 0.375391286255353 0.75626424555409 0.24425605 0.37001845 prediction 0.512528491108179 Functional Gain - NR1H2 ENSG00000131408 UTR5 Human protein_coding chr19:50880050 chr19:50880053 . . 0 24 hm5C_associated_SNPs_107168 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:50880053-50880054
64251 chr6 31802804 31802804 1 + C G rs11548074 31802800 + 31802780 31802820 41 CTTGCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTC CTTGCGCTGCCTTTGCGCAGCAGCGGGCGGGCGGCCACGTC < 41bp 0.490718013954073 0.756256677070375 0.37023914 0.7647601 prediction 0.512513354140751 Functional Gain - C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802800 chr6:31802804 . . 0 25 hm5C_associated_SNPs_107169 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:31802694-31802944
64251 chr8 11644438 11644438 1 + C G rs535687631 11644437 + 11644417 11644457 41 GGGACCACGGGTGTGAGCCACCGCGCCCAGCTAGCTCCTGT GGGACCACGGGTGTGAGCCACGGCGCCCAGCTAGCTCCTGT < 41bp 0.551551185743944 0.80779477306436 0.3791276 0.7141006 prediction 0.512487174640831 Functional Gain - NEIL2 ENSG00000154328 UTR3 Human protein_coding chr8:11644437 chr8:11644438 . . 0 22 hm5C_associated_SNPs_107170 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:11644388-11644455
64251 chr1 179013161 179013161 1 + T C UCEC 179013159 + 179013139 179013179 41 GCACCCAAGCTGGACCATACCTTGCAGTCTCCCTGGGAGAT GCACCCAAGCTGGACCATACCTCGCAGTCTCCCTGGGAGAT < 41bp 0.541457697389402 0.797637196142844 0.031835616 0.1702227 prediction 0.512358997506884 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179013159 chr1:179013161 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_107176 0 0 15 ALKBH5 POSTAR2 GSE38201,GSM936506 chr1:179013147-179013173
64251 chr1 11849472 11849472 1 - G C rs553811159 11849473 - 11849453 11849493 41 AGCTGGGCCCCATGCTCTGCCCCAAGCCCCCAACCCCGCGG AGCTGGGCCCCATGCTCTGCCGCAAGCCCCCAACCCCGCGG < 41bp 0.447463366797037 0.756134684975471 0.16930017 0.14295724 prediction 0.512269369950942 Functional Gain - C1orf167 ENSG00000215910 CDS Human protein_coding chr1:11849473 chr1:11849472 nonsynonymous SNV 0.281 0 22 hm5C_associated_SNPs_107184 0 0 2 UPF1 POSTAR2 ENCODE chr1:11849467-11849514
64251 chr17 1733324 1733324 1 + C A rs184577713 1733320 + 1733300 1733340 41 TCGGGCCAATAACTGCGCAGCGCGCGGGACCCGGGTGGGGA TCGGGCCAATAACTGCGCAGCGCGAGGGACCCGGGTGGGGA < 41bp 0.622945328641965 0.879055450866349 0.42319047 0.7970928 prediction 0.512220244448769 Functional Gain - RPA1 ENSG00000132383 UTR5 Human protein_coding chr17:1733320 chr17:1733324 . . 0 25 hm5C_associated_SNPs_107191 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:1733320-1733340
64251 chr16 27374274 27374274 1 + C G rs577232756 27374273 + 27374253 27374293 41 AACCCGAGATGCCCTGTGTCCCCCAGCTCTCTGAGCCAACC AACCCGAGATGCCCTGTGTCCGCCAGCTCTCTGAGCCAACC < 41bp 0.440624817958998 0.756091392791711 0.15975285 0.26158932 prediction 0.512182785583422 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374273 chr16:27374274 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_107194 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:27374260-27374280
64251 chr16 68390607 68390607 1 + C G rs373518587 68390606 + 68390586 68390626 41 CCCCCCTCTCCTTGACAGGCCCGGGCAGAGCCACGCAGCGG CCCCCCTCTCCTTGACAGGCCGGGGCAGAGCCACGCAGCGG < 41bp 0.438788920068346 0.756052878845707 0.10675138 0.3726992 prediction 0.512105757691415 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68390606 chr16:68390607 synonymous SNV . 0 22 hm5C_associated_SNPs_107198 0 0 5 PRPF8 POSTAR2 ENCODE chr16:68390576-68390650
64251 chr19 45411026 45411026 1 + C A UCEC 45411022 + 45411002 45411042 41 ACTTGTTCCACACAGGATGCCAGGCCAAGGTGGAGCAAGCG ACTTGTTCCACACAGGATGCCAGGACAAGGTGGAGCAAGCG < 41bp 0.367846981195658 0.756051057992854 0.32637227 0.23419872 prediction 0.512102115985708 Functional Gain - APOE ENSG00000130203 CDS Human protein_coding chr19:45411022 chr19:45411026 nonsynonymous SNV 0.014 2 25 hm5C_associated_SNPs_107199 0 0 11 DDX3X POSTAR2 ENCODE chr19:45411025-45411090
64251 chr1 203032982 203032982 1 + T C UCEC 203032980 + 203032960 203033000 41 TGGCCTATGGGGACATGAACCATGAGTGGATTGGGAATGAA TGGCCTATGGGGACATGAACCACGAGTGGATTGGGAATGAA < 41bp 0.555666658378781 0.811702262883335 0.161309 0.22111642 prediction 0.512071209009108 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203032980 chr1:203032982 synonymous SNV . 0 23 hm5C_associated_SNPs_107202 0 0 5 DDX24 POSTAR2 ENCODE chr1:203032956-203032996
64251 chr17 3627754 3627754 1 + C G rs142224121 3627750 + 3627730 3627770 41 CCTGTTCAGCTCTCTGGCCTCGCCCTGCCCCGGGTCCCCAA CCTGTTCAGCTCTCTGGCCTCGCCGTGCCCCGGGTCCCCAA < 41bp 0.568287295941101 0.824303540474994 0.18264753 0.53476715 prediction 0.512032489067787 Functional Gain - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3627750 chr17:3627754 synonymous SNV . 0 25 hm5C_associated_SNPs_107205 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:3627723-3627771
64251 chr9 34646774 34646774 1 + C A STAD 34646770 + 34646750 34646790 41 GCGGACGCCGCAGCAGCAACCTTCCGGGCAAACGGTAACTG GCGGACGCCGCAGCAGCAACCTTCAGGGCAAACGGTAACTG < 41bp 0.353507399134289 0.755989674904685 0.06789106 0.059182346 prediction 0.511979349809371 Functional Gain - GALT ENSG00000213930;ENSG00000258728 CDS Human other chr9:34646770 chr9:34646774 synonymous SNV . 0 25 hm5C_associated_SNPs_107209 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:34646770-34646808
64251 chr3 9786133 9786133 1 + C T SKCM 9786132 + 9786112 9786152 41 AGCGCAAGCGGGGTAGGAGCCCCCGGCCCAGTTCGAGCTCA AGCGCAAGCGGGGTAGGAGCCTCCGGCCCAGTTCGAGCTCA < 41bp 0.498561422946357 0.755988995044951 0.3748995 0.6137541 prediction 0.511977990089902 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9786132 chr3:9786133 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_107210 0 0 1 FMR1 POSTAR2 ENCODE chr3:9786116-9786149
64251 chr19 30935396 30935396 1 + T A HNSC 30935392 + 30935372 30935412 41 GTGCACGTTGTGCGACTTCGCGGCTTCGCAGGAGGAGGAGC GTGCACGTTGTGCGACTTCGCGGCATCGCAGGAGGAGGAGC < 41bp 0.608678133477751 0.864665739401301 0.28235936 0.77092373 prediction 0.5119752118471 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30935392 chr19:30935396 synonymous SNV . 0 25 hm5C_associated_SNPs_107211 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:30935391-30935419
64251 chr16 30680217 30680217 1 + T C COAD 30680215 + 30680195 30680235 41 TTCCTGCCTGGGTCCGGCCCCCTGAGGCCGCCCGGACTCCA TTCCTGCCTGGGTCCGGCCCCCCGAGGCCGCCCGGACTCCA < 41bp 0.53262437372995 0.788484025555405 0.26798055 0.1570195 prediction 0.511719303650911 Functional Gain - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680215 chr16:30680217 synonymous SNV . 0 23 hm5C_associated_SNPs_107223 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30680175-30680217
64251 chr7 36193946 36193946 1 + C G KIRC 36193942 + 36193922 36193962 41 TCCTGGCGGACCATGGGGAGCACCCTGGGCTGCCACCGCTC TCCTGGCGGACCATGGGGAGCACCGTGGGCTGCCACCGCTC < 41bp 0.458488486458644 0.755854020364925 0.49403656 0.79802823 prediction 0.51170804072985 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36193942 chr7:36193946 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_107225 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:36193920-36193948
64251 chr4 119631352 119631352 1 + T A THCA 119631348 + 119631328 119631368 41 AGGTGGAGGAAGAGGTGGAACTTCTGCTGGCCGTGGACGAG AGGTGGAGGAAGAGGTGGAACTTCAGCTGGCCGTGGACGAG < 41bp 0.430067229610814 0.755838385994156 0.3654955 0.42516702 prediction 0.511676771988312 Functional Gain - METTL14 ENSG00000145388 CDS Human protein_coding chr4:119631348 chr4:119631352 synonymous SNV . 0 25 hm5C_associated_SNPs_107226 0 0 14 METTL14 POSTAR2 GSE46705,GSM1135015 chr4:119631280-119631360
64251 chr1 92789806 92789806 1 + T G rs143344868 92789803 + 92789783 92789823 41 TTTAGGGGCTCAGGTACAGCCATTAAACCACTGCCAAGTTA TTTAGGGGCTCAGGTACAGCCATGAAACCACTGCCAAGTTA < 41bp 0.392423928205187 0.755825333188824 0.81000054 0.51315176 prediction 0.511650666377648 Functional Gain - RPAP2 ENSG00000122484 CDS Human protein_coding chr1:92789803 chr1:92789806 nonsynonymous SNV 0.985 0 24 hm5C_associated_SNPs_107227 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:92789796-92789825
64251 chr12 56515331 56515331 1 + C A COAD 56515327 + 56515307 56515347 41 CTACAGCCTCGTCCAGTGTCCCAGCAAGAACTGGTGGCCCC CTACAGCCTCGTCCAGTGTCCCAGAAAGAACTGGTGGCCCC < 41bp 0.352216319910105 0.755801958481327 0.31892574 0.26194942 prediction 0.511603916962654 Functional Gain - ZC3H10 ENSG00000135482 CDS Human protein_coding chr12:56515327 chr12:56515331 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_107229 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:56515331-56515332
64251 chr17 27075086 27075086 1 + C G LUSC 27075085 + 27075065 27075105 41 ATTCCCTGCCCTAATCGCTGCCCCATGAAGCTGAGCCGCCG ATTCCCTGCCCTAATCGCTGCGCCATGAAGCTGAGCCGCCG < 41bp 0.435440472237425 0.755794967050414 0.16221377 0.12295732 prediction 0.511589934100828 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075085 chr17:27075086 nonsynonymous SNV 0.978 0 22 hm5C_associated_SNPs_107231 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:27075058-27075090
64251 chr20 55966699 55966699 1 + C G rs371553583 55966698 + 55966678 55966718 41 TCCCGCGGCCCCTGGCCGCCCCCGGCGCCATGCACGGCTCG TCCCGCGGCCCCTGGCCGCCCGCGGCGCCATGCACGGCTCG < 41bp 0.581307518391379 0.837053985281292 0.7838008 0.88213855 prediction 0.511492933779825 Functional Gain - RBM38 ENSG00000132819 CDS Human protein_coding chr20:55966698 chr20:55966699 nonsynonymous SNV 0.612 0 22 hm5C_associated_SNPs_107237 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr20:55966675-55966701
64251 chr1 161069201 161069201 1 + C A UCEC 161069200 + 161069180 161069220 41 GTGCGGCCCTGCTCCAAACTCCTGGACCCCATCCAGGTCAT GTGCGGCCCTGCTCCAAACTCATGGACCCCATCCAGGTCAT < 41bp 0.49342356832443 0.75573548341229 0.22881788 0.36556274 prediction 0.511470966824581 Functional Gain - KLHDC9 ENSG00000162755 CDS Human protein_coding chr1:161069200 chr1:161069201 nonsynonymous SNV 0.708 2 22 hm5C_associated_SNPs_107239 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:161069190-161069215
64251 chr19 11486219 11486219 1 + C G HNSC 11486218 + 11486198 11486238 41 TTCCAGTACCCACCCTCAACCCGAGAGCTTTTCCGGCTCCT TTCCAGTACCCACCCTCAACCGGAGAGCTTTTCCGGCTCCT < 41bp 0.435105618679741 0.755708610683485 0.3149783 0.8728851 prediction 0.511417221366971 Functional Gain - SWSAP1 ENSG00000173928 CDS Human protein_coding chr19:11486218 chr19:11486219 nonsynonymous SNV 0.553 0 22 hm5C_associated_SNPs_107241 0 0 1 RBM15 POSTAR2 ENCODE chr19:11486192-11486281
64251 chr19 35524595 35524595 1 + C A OV 35524591 + 35524571 35524611 41 CTGCTCTTCTTCGAAAACTACGAGCACAACACCAGCGTCGT CTGCTCTTCTTCGAAAACTACGAGAACAACACCAGCGTCGT < 41bp 0.343310777570258 0.755673971937342 0.31473216 0.3556564 prediction 0.511347943874685 Functional Gain - SCN1B ENSG00000105711 CDS Human protein_coding chr19:35524591 chr19:35524595 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_107248 0 0 2 GRWD1 POSTAR2 ENCODE chr19:35524415-35524649
64251 chr8 79515931 79515931 1 + T G rs535816752 79515929 + 79515909 79515949 41 CCCTGGTAAACTGTTTAAACCATCAAACCCCTACAGTCAGT CCCTGGTAAACTGTTTAAACCAGCAAACCCCTACAGTCAGT < 41bp 0.47409355618063 0.755646090015338 0.039703935 0.08992192 prediction 0.511292180030676 Functional Gain - PKIA ENSG00000171033 UTR3 Human protein_coding chr8:79515929 chr8:79515931 . . 0 23 hm5C_associated_SNPs_107254 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:79515913-79515951
64251 chr19 11560203 11560203 1 + C G rs368935929 11560202 + 11560182 11560222 41 GCCACCGCCTGAAGCACCCACCGAAGACGACCATGACGAGC GCCACCGCCTGAAGCACCCACGGAAGACGACCATGACGAGC < 41bp 0.595110379134439 0.850753966544214 0.13975564 0.40077496 prediction 0.511287174819548 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11560202 chr19:11560203 synonymous SNV . 0 22 hm5C_associated_SNPs_107255 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:11560124-11560239
64251 chr12 58015593 58015593 1 + C A STAD 58015589 + 58015569 58015609 41 TTGAACGTGAGATTCCGAGACCGGCTACCCACGCCGATCCC TTGAACGTGAGATTCCGAGACCGGATACCCACGCCGATCCC < 41bp 0.34148497337789 0.755628826426967 0.6165312 0.8557062 prediction 0.511257652853935 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58015589 chr12:58015593 nonsynonymous SNV 0.816 3 25 hm5C_associated_SNPs_107258 0 0 2 PRPF8 POSTAR2 ENCODE chr12:58015578-58015654
64251 chr8 21961066 21961066 1 + C A rs115250794 21961062 + 21961042 21961082 41 CCCAAAGCATGTTCCGCACCCAGGCGGGGGCCCCTGCTAAT CCCAAAGCATGTTCCGCACCCAGGAGGGGGCCCCTGCTAAT < 41bp 0.64912512490962 0.904731983077922 0.36000818 0.72792953 prediction 0.511213716336604 Functional Gain - FAM160B2 ENSG00000256586 ncRNA_exonic Human other chr8:21961062 chr8:21961066 . . 0 25 hm5C_associated_SNPs_107261 0 0 1 RBFOX2 POSTAR2 ENCODE chr8:21961048-21961121
64251 chr15 38591666 38591666 1 + T C LGG 38591664 + 38591644 38591684 41 GGAGGGAGTGGACTAAGCAGCGTCACTGTCTTCAAAGTCCC GGAGGGAGTGGACTAAGCAGCGCCACTGTCTTCAAAGTCCC < 41bp 0.557593418077033 0.81318920007374 0.1341247 0.12279409 prediction 0.511191563993413 Functional Gain - SPRED1 ENSG00000166068 CDS Human protein_coding chr15:38591664 chr15:38591666 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_107263 0 0 2 DDX3X POSTAR2 ENCODE chr15:38591581-38591677
64251 chr16 3707293 3707293 1 + C T rs34186031 3707292 + 3707272 3707312 41 CCCACCTTCCAGTGGCTGATCCCCGACAGCGCTGACACCAC CCCACCTTCCAGTGGCTGATCTCCGACAGCGCTGACACCAC < 41bp 0.518069835411609 0.773639577511151 0.087765515 0.8327613 prediction 0.511139484199085 Functional Gain - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707292 chr16:3707293 nonsynonymous SNV 0.330 1 22 hm5C_associated_SNPs_107265 0 0 1 PPIG POSTAR2 ENCODE chr16:3707240-3707338
64251 chr19 42730344 42730344 1 + C G GBM 42730343 + 42730323 42730363 41 CTGCATCAGCGGGTCCATGCCCGAGCTCGGACTTTGACGCT CTGCATCAGCGGGTCCATGCCGGAGCTCGGACTTTGACGCT < 41bp 0.587376957620765 0.842944913751867 0.23632884 0.92468065 prediction 0.511135912262203 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42730343 chr19:42730344 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_107267 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:42730340-42730360
64251 chr20 61917752 61917752 1 + T C rs544748417 61917750 + 61917730 61917770 41 GGTAGTAAGGGATGGCGGGACGTCACCACCTTTTTTTCGGG GGTAGTAAGGGATGGCGGGACGCCACCACCTTTTTTTCGGG < 41bp 0.523370257997084 0.778926373137746 0.19722289 0.23664346 prediction 0.511112230281324 Functional Gain - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61917750 chr20:61917752 nonsynonymous SNV 0.973 0 23 hm5C_associated_SNPs_107268 0 0 5 PPIG POSTAR2 ENCODE chr20:61917727-61917758
64251 chr19 52091119 52091119 1 + T C UCEC 52091117 + 52091097 52091137 41 TGCAGTGACTGTGGAAAAACCTTCACCCAAAAGTCACACCT TGCAGTGACTGTGGAAAAACCTCCACCCAAAAGTCACACCT < 41bp 0.476157843649707 0.755526600025689 0.01581785 0.8564872 prediction 0.511053200051377 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52091117 chr19:52091119 nonsynonymous SNV 0.626 3 23 hm5C_associated_SNPs_107273 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:52091094-52091126
64251 chr3 131080839 131080839 1 + C A UCEC 131080835 + 131080815 131080855 41 CGCTGGGGCCAGGCTAGAGGCATGCCTGCTATGCGCTCCTG CGCTGGGGCCAGGCTAGAGGCATGACTGCTATGCGCTCCTG < 41bp 0.64434603224971 0.899846574747879 0.29901177 0.44852722 prediction 0.511001084996338 Functional Gain - NUDT16P1 ENSG00000246082 ncRNA_exonic Human transcribed_unitary_pseudogene chr3:131080835 chr3:131080839 . . 0 25 hm5C_associated_SNPs_107276 0 0 1 DDX3X POSTAR2 ENCODE chr3:131080774-131080934
64251 chr10 101464242 101464242 1 + T C LGG 101464240 + 101464220 101464260 41 AGGAAGGTGTCCGACAAGCCCATGGTAGCTGGTTCCGTCTC AGGAAGGTGTCCGACAAGCCCACGGTAGCTGGTTCCGTCTC < 41bp 0.511634478462367 0.767104315636185 0.3984537 0.4199776 prediction 0.510939674347634 Functional Gain - ENTPD7 ENSG00000198018 CDS Human protein_coding chr10:101464240 chr10:101464242 synonymous SNV . 0 23 hm5C_associated_SNPs_107280 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:101464234-101464256
64251 chr2 122485894 122485894 1 - A G SKCM 122485896 - 122485876 122485916 41 AGAAAAAAGTTTCAGGTACTCTTGACACTCCTGAGAAGACT AGAAAAAAGTTTCAGGTACTCTCGACACTCCTGAGAAGACT < 41bp 0.54205032528109 0.797513745637283 0.11383495 0.58371526 prediction 0.510926840712387 Functional Gain - NIFK ENSG00000155438 CDS Human protein_coding chr2:122485896 chr2:122485894 synonymous SNV . 0 23 hm5C_associated_SNPs_107283 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:122485853-122485903
64251 chr16 67917918 67917918 1 + T C CESC 67917916 + 67917896 67917936 41 GACCCCATCACTCGGGACCACATGGGCTCCGTTATGGCCCA GACCCCATCACTCGGGACCACACGGGCTCCGTTATGGCCCA < 41bp 0.510267495723387 0.765719611778119 0.2745518 0.2980989 prediction 0.510904232109463 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67917916 chr16:67917918 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_107284 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67917869-67917927
64251 chr13 115091726 115091726 1 + T G rs149344812 115091724 + 115091704 115091744 41 ATAAAAAGCTAATGGAAGCTCTTGAACCGCCACTGGAGGAG ATAAAAAGCTAATGGAAGCTCTGGAACCGCCACTGGAGGAG < 41bp 0.595845528846294 0.851290036534532 0.26621586 0.46249774 prediction 0.510889015376476 Functional Gain - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115091724 chr13:115091726 synonymous SNV . 0 23 hm5C_associated_SNPs_107286 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:115091694-115091727
64251 chr7 6617262 6617262 1 + C G rs182391055 6617261 + 6617241 6617281 41 CTCGCCCGAGTCCGGGGCGGCCCCGGTGTCCCCTCCGAGCC CTCGCCCGAGTCCGGGGCGGCGCCGGTGTCCCCTCCGAGCC < 41bp 0.535041294698478 0.790468631222349 0.47924557 0.6111922 prediction 0.510854673047741 Functional Gain - ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617261 chr7:6617262 . . 0 22 hm5C_associated_SNPs_107289 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:6617248-6617284
64251 chr17 38350730 38350730 1 + C G rs7221536 38350726 + 38350706 38350746 41 GCATGCCCAGGCTTGTGAGCCAAGCTGCTTTTTGGGGCAGG GCATGCCCAGGCTTGTGAGCCAAGGTGCTTTTTGGGGCAGG < 41bp 0.561489268141682 0.816913990546655 0.4039721 0.85375774 prediction 0.510849444809947 Functional Gain - RAPGEFL1 ENSG00000108352 UTR3 Human protein_coding chr17:38350726 chr17:38350730 . . 0 25 hm5C_associated_SNPs_107290 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039849 chr17:38350724-38350745
64251 chr9 91926133 91926133 1 + C G rs564186726 91926132 + 91926112 91926152 41 TAGTCTCCGGCGAGTTGTTGCCTGGGCTGGACGTGGTTTTG TAGTCTCCGGCGAGTTGTTGCGTGGGCTGGACGTGGTTTTG < 41bp 0.477748043675258 0.75541964105213 0.3865415 0.85695267 prediction 0.510839282104259 Functional Gain - CKS2 ENSG00000123975 UTR5 Human protein_coding chr9:91926132 chr9:91926133 . . 0 22 hm5C_associated_SNPs_107291 0 0 69 DDX3X POSTAR2 GSE70804,GSM1819209 chr9:91926100-91926140
64251 chr7 100732051 100732051 1 + C G LUAD 100732047 + 100732027 100732067 41 GGGGCCGAATCTGGACGGCTCTGGCCTCCTCCCCAGACCCA GGGGCCGAATCTGGACGGCTCTGGGCTCCTCCCCAGACCCA < 41bp 0.579167593621923 0.834578615203018 0.20854995 0.49920636 prediction 0.510822043162191 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732047 chr7:100732051 synonymous SNV . 0 25 hm5C_associated_SNPs_107293 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100732007-100732076
64251 chrX 51637766 51637766 1 + C A OV 51637762 + 51637742 51637782 41 CAGTCTGTCACCCCCTCCCCCAGCCTCCTGCCTCCACCCTC CAGTCTGTCACCCCCTCCCCCAGCATCCTGCCTCCACCCTC < 41bp 0.346160448782519 0.755408368596955 0.07211107 0.12842947 prediction 0.510816737193911 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637762 chrX:51637766 nonsynonymous SNV 0.149 1 25 hm5C_associated_SNPs_107294 0 0 1 PCBP2 POSTAR2 ENCODE chrX:51637758-51637840
64251 chr6 26156726 26156726 1 + T A LGG 26156722 + 26156702 26156742 41 AGGTGCGGCCAAGCGCAAAGCGTCTGGGCCCCCGGTGTCCG AGGTGCGGCCAAGCGCAAAGCGTCAGGGCCCCCGGTGTCCG < 41bp 0.599273334678634 0.854662575637607 0.16772997 0.17478669 prediction 0.510778481917947 Functional Gain - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26156722 chr6:26156726 synonymous SNV . 0 25 hm5C_associated_SNPs_107295 0 0 68 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26156540-26156740
64251 chr3 183906908 183906908 1 + C G LUAD 183906904 + 183906884 183906924 41 CAGGTGGCTGGAGGATGAGGCTGGCCCTGGCCCGGGCCCTC CAGGTGGCTGGAGGATGAGGCTGGGCCTGGCCCGGGCCCTC < 41bp 0.584798431867148 0.840184293481201 0.8931129 0.93001586 prediction 0.510771723228107 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183906904 chr3:183906908 nonsynonymous SNV 0.992 5 25 hm5C_associated_SNPs_107297 0 0 2 PPIG POSTAR2 ENCODE chr3:183906877-183906930
64251 chr19 39963553 39963553 1 + C T SKCM 39963552 + 39963532 39963572 41 CGGCCAGACCGTGCGCATCTCCCAGGGGCCCTACAAAGGTG CGGCCAGACCGTGCGCATCTCTCAGGGGCCCTACAAAGGTG < 41bp 0.499046280738318 0.755380460846804 0.17731881 0.057542205 prediction 0.510760921693607 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963552 chr19:39963553 synonymous SNV . 0 22 hm5C_associated_SNPs_107299 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:39963531-39963561
64251 chr1 22846616 22846616 1 + C T UCEC 22846615 + 22846595 22846635 41 TTCCCCACTCTTCAGGATCACCGGAAGCACATCCATGAGGT TTCCCCACTCTTCAGGATCACTGGAAGCACATCCATGAGGT < 41bp 0.500167185698129 0.755533566404968 0.6138717 0.5966767 prediction 0.510732761413678 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22846615 chr1:22846616 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_107302 0 0 3 GRWD1 POSTAR2 ENCODE chr1:22846591-22846693
64251 chr12 124189157 124189157 1 + T C UCEC 124189155 + 124189135 124189175 41 TGCCTGGATATTCCTGCTCACCTGAGCATCCGCATCCTCAT TGCCTGGATATTCCTGCTCACCCGAGCATCCGCATCCTCAT < 41bp 0.547318315770099 0.802647380166668 0.02416411 0.038268536 prediction 0.510658128793139 Functional Gain - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124189155 chr12:124189157 nonsynonymous SNV 0.013 4 23 hm5C_associated_SNPs_107307 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:124189143-124189198
64251 chr6 43146124 43146124 1 + C T SKCM 43146123 + 43146103 43146143 41 CCGCATGCGGTGATGTATGCCCCCACCTCGGGCCTGGGTGA CCGCATGCGGTGATGTATGCCTCCACCTCGGGCCTGGGTGA < 41bp 0.516652024645315 0.771978242262341 0.034556895 0.9116952 prediction 0.510652435234053 Functional Gain - SRF ENSG00000112658 CDS Human protein_coding chr6:43146123 chr6:43146124 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_107308 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:43146105-43146132
64251 chr11 114182868 114182868 1 + C T SKCM 114182867 + 114182847 114182887 41 CACTGGGGGCCGTCCCCTTACCCCCGGCTGACTGCGTGCTC CACTGGGGGCCGTCCCCTTACTCCCGGCTGACTGCGTGCTC < 41bp 0.497622759742344 0.75532406242608 0.25333896 0.17223153 prediction 0.51064812485216 Functional Gain - NNMT ENSG00000166741 CDS Human protein_coding chr11:114182867 chr11:114182868 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_107310 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:114182861-114182879
64251 chr15 41794328 41794328 1 + C G rs150465612 41794324 + 41794304 41794344 41 CACGCGCAGCGCGCCGTCACCAAGCCGCGCTACATGCAGTG CACGCGCAGCGCGCCGTCACCAAGGCGCGCTACATGCAGTG < 41bp 0.565052369985338 0.820352541460088 0.8002151 0.8975371 prediction 0.510600342949501 Functional Gain - ITPKA ENSG00000137825 CDS Human protein_coding chr15:41794324 chr15:41794328 nonsynonymous SNV 0.948 3 25 hm5C_associated_SNPs_107312 0 0 1 LIN28B POSTAR2 ENCODE chr15:41794276-41794339
64251 chr16 70500150 70500150 1 + T C UCEC 70500148 + 70500128 70500168 41 CTGGACTGCCTGCTGGACATCATGACCTATCGGGTGAGGCT CTGGACTGCCTGCTGGACATCACGACCTATCGGGTGAGGCT < 41bp 0.49292186951745 0.755288020307424 0.26573566 0.16699451 prediction 0.510576040614849 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70500148 chr16:70500150 nonsynonymous SNV 0.989 2 23 hm5C_associated_SNPs_107315 0 0 4 DDX24 POSTAR2 ENCODE chr16:70500038-70500174
64251 chr9 35751973 35751973 1 + C G rs570413538 35751972 + 35751952 35751992 41 GTTTTCAGTCAGCTTACAGACCGAGGAGCGTGTACAGCCTG GTTTTCAGTCAGCTTACAGACGGAGGAGCGTGTACAGCCTG < 41bp 0.597728595512027 0.852999641343407 0.38589537 0.890422 prediction 0.510542091662761 Functional Gain - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35751972 chr9:35751973 synonymous SNV . 0 22 hm5C_associated_SNPs_107320 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:35751932-35751981
64251 chr15 75189518 75189518 1 + C A UCEC 75189514 + 75189494 75189534 41 TCAGGAAGACCCCTACCTCTCAATCTATGACCCCCCTGTAC TCAGGAAGACCCCTACCTCTCAATATATGACCCCCCTGTAC < 41bp 0.344731966708656 0.755257956889164 0.07722902 0.06444663 prediction 0.510515913778328 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75189514 chr15:75189518 synonymous SNV . 0 25 hm5C_associated_SNPs_107323 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:75189500-75189520
64251 chr19 56671700 56671700 1 + T G rs147321718 56671698 + 56671678 56671718 41 CCTCCTCCACCTGCGCCTCCCTTGTCTGAACTTCCCAACGC CCTCCTCCACCTGCGCCTCCCTGGTCTGAACTTCCCAACGC < 41bp 0.428874341954624 0.755244080424418 0.020964593 0.12210122 prediction 0.510488160848837 Functional Gain - ZNF444 ENSG00000167685 UTR3 Human protein_coding chr19:56671698 chr19:56671700 . . 0 23 hm5C_associated_SNPs_107325 0 0 8 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:56671700-56671720
64251 chr12 120995448 120995448 1 + C T STAD 120995447 + 120995427 120995467 41 GTTGGTGGCTTTGCCCAAATCCAAATGGATGAATGTAGACC GTTGGTGGCTTTGCCCAAATCTAAATGGATGAATGTAGACC < 41bp 0.506982656897715 0.762187946124789 0.22745144 0.19723183 prediction 0.510410578454147 Functional Gain - RNF10 ENSG00000022840 CDS Human protein_coding chr12:120995447 chr12:120995448 synonymous SNV . 0 22 hm5C_associated_SNPs_107330 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:120995378-120995456
64251 chr15 78730689 78730689 1 + C A LUAD 78730685 + 78730665 78730705 41 ATATGGTCTCCGGCGATGGACGCCCCAAAAGCAGGTCAGTT ATATGGTCTCCGGCGATGGACGCCACAAAAGCAGGTCAGTT < 41bp 0.368545688294632 0.755201210691488 0.22249213 0.14474851 prediction 0.510402421382977 Functional Gain - IREB2 ENSG00000136381 CDS Human protein_coding chr15:78730685 chr15:78730689 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_107331 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:78730664-78730690
64251 chr10 12200045 12200045 1 + C G SKCM 12200044 + 12200024 12200064 41 TCCAACCTGTATGTTATTTCCCAGATGCTGTCTGTTCGATT TCCAACCTGTATGTTATTTCCGAGATGCTGTCTGTTCGATT < 41bp 0.597166536485271 0.852345130312461 0.12745413 0.45509568 prediction 0.510357187654381 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12200044 chr10:12200045 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_107336 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr10:12200022-12200078
64251 chr7 106508576 106508576 1 + C A LUAD 106508572 + 106508552 106508592 41 CCCGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGCTCT CCCGCGCATGGCGGAGGTGGCCAGACGCGACCCCAAGCTCT < 41bp 0.363196635132495 0.755158396435516 0.90022904 0.92803806 prediction 0.510316792871032 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508572 chr7:106508576 nonsynonymous SNV 0.086 0 25 hm5C_associated_SNPs_107338 0 0 5 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr15 77324734 77324734 1 + C G rs149195362 77324733 + 77324713 77324753 41 GAGCACGGGCACAGAGCCCCCCGGTGAGGTCCGGCTTGCGG GAGCACGGGCACAGAGCCCCCGGGTGAGGTCCGGCTTGCGG < 41bp 0.597226410037591 0.852382022410975 0.20740786 0.8420017 prediction 0.510311224746768 Functional Gain - PSTPIP1 ENSG00000140368 CDS Human protein_coding chr15:77324733 chr15:77324734 synonymous SNV . 0 22 hm5C_associated_SNPs_107339 1 0 1 PRPF8 POSTAR2 ENCODE chr15:77324709-77324780
64251 chr4 89574052 89574052 1 + C G LUSC 89574048 + 89574028 89574068 41 TTCTTCACCTGGGGAAAGAACAGCCATGGGCAGCTTGGCTT TTCTTCACCTGGGGAAAGAACAGCGATGGGCAGCTTGGCTT < 41bp 0.57871964923469 0.833874911243384 0.48035896 0.8279419 prediction 0.510310524017388 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89574048 chr4:89574052 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_107340 0 0 2 BUD13 POSTAR2 ENCODE chr4:89573970-89574082
64251 chr22 32352435 32352435 1 + T G STAD 32352432 + 32352412 32352452 41 AAATGAAGGGTGATTACTACCGCTACTTAGCAGAGGTCGCT AAATGAAGGGTGATTACTACCGCGACTTAGCAGAGGTCGCT < 41bp 0.649441872951591 0.90459382622674 0.03630939 0.2379401 prediction 0.510303906550297 Functional Gain - YWHAH ENSG00000128245 CDS Human protein_coding chr22:32352432 chr22:32352435 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_107341 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:32352400-32352440
64251 chr7 108214930 108214930 1 + T A rs138263970 108214926 + 108214906 108214946 41 TATAAGCTATGGGACATATGCTGATCACAGGCTATATTCAT TATAAGCTATGGGACATATGCTGAACACAGGCTATATTCAT < 41bp 0.552817091303555 0.807937786098475 0.13481084 0.10772291 prediction 0.510241389589841 Functional Gain - DNAJB9 ENSG00000128590 UTR3 Human protein_coding chr7:108214926 chr7:108214930 . . 0 25 hm5C_associated_SNPs_107349 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:108214925-108214947
64251 chr4 38051410 38051410 1 + C T SKCM 38051409 + 38051389 38051429 41 GCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGGAACC GCAAACACCCTGAGTCACTTCTCCATCGAATGCCAGGAACC < 41bp 0.534659971329084 0.789775237043591 0.47437215 0.9612213 prediction 0.510230531429013 Functional Gain - TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38051409 chr4:38051410 nonsynonymous SNV 0.048 4 22 hm5C_associated_SNPs_107350 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr4:38051389-38051416
64251 chr17 19555037 19555037 1 + T C CESC 19555035 + 19555015 19555055 41 AGTGGTGCTGATAATCGGAGCTTGGAATTACCCCTTCGTTC AGTGGTGCTGATAATCGGAGCTCGGAATTACCCCTTCGTTC < 41bp 0.502283545491548 0.757389862987359 0.10156658 0.15682161 prediction 0.510212634991622 Functional Gain - ALDH3A2 ENSG00000072210 CDS Human protein_coding chr17:19555035 chr17:19555037 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_107353 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr17:19555024-19555047
64251 chr22 35782786 35782786 1 + C G rs141730669 35782785 + 35782765 35782805 41 TACTTCCCAGAAGAGCTGCACCGCAAGGCTGCCCTGGAGCA TACTTCCCAGAAGAGCTGCACGGCAAGGCTGCCCTGGAGCA < 41bp 0.601253777510752 0.856353584106616 0.2681244 0.35329616 prediction 0.510199613191729 Functional Gain - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35782785 chr22:35782786 nonsynonymous SNV 0.779 4 22 hm5C_associated_SNPs_107354 0 0 2 GRWD1 POSTAR2 ENCODE chr22:35782686-35782796
64251 chr2 97019092 97019092 1 + C G BRCA 97019088 + 97019068 97019108 41 ATCGCCAGATCTGCCCTTCCCTGGCCGGGTTCCAGTTTACA ATCGCCAGATCTGCCCTTCCCTGGGCGGGTTCCAGTTTACA < 41bp 0.453841436781646 0.75508513879145 0.1091916 0.20397148 prediction 0.510170277582901 Functional Gain - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97019088 chr2:97019092 nonsynonymous SNV 0.993 3 25 hm5C_associated_SNPs_107355 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr2:97019075-97019097
64251 chr20 43120352 43120352 1 + C A rs552475771 43120348 + 43120328 43120368 41 CACACACTGCTGAAAAGGCCCAAGCAGGGCAAGTGGGATGG CACACACTGCTGAAAAGGCCCAAGAAGGGCAAGTGGGATGG < 41bp 0.387399136121543 0.755070109786967 0.031297415 0.09435183 prediction 0.510140219573934 Functional Gain - TTPAL ENSG00000124120 UTR3 Human protein_coding chr20:43120348 chr20:43120352 . . 0 25 hm5C_associated_SNPs_107357 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:43120349-43120416
64251 chr5 82373399 82373399 1 + C A rs28383113 82373395 + 82373375 82373415 41 AAAACCTTGATCTGTGAAAGCGGGCGTTTTGGAAGATACCG AAAACCTTGATCTGTGAAAGCGGGAGTTTTGGAAGATACCG < 41bp 0.60678218864849 0.861848029839871 0.89162946 0.89442736 prediction 0.510131682382762 Functional Gain - XRCC4 ENSG00000152422 UTR5 Human protein_coding chr5:82373395 chr5:82373399 . . 0 25 hm5C_associated_SNPs_107360 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585675 chr5:82373386-82373402
64251 chr11 3405445 3405445 1 + C A LUAD 3405444 + 3405424 3405464 41 CTACAGTTCCTGTCCCATGACCAGGGCCAGATCACCAAGGA CTACAGTTCCTGTCCCATGACAAGGGCCAGATCACCAAGGA < 41bp 0.509587899991754 0.764651051482822 0.55319065 0.2990973 prediction 0.510126302982135 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3405444 chr11:3405445 . . 0 22 hm5C_associated_SNPs_107361 0 0 2 BUD13 POSTAR2 ENCODE chr11:3405433-3405518
64251 chr1 161130715 161130715 1 + C T LIHC 161130714 + 161130694 161130734 41 TCCCCTGCCTGGCTCACCACCCCCAACAGTGGCTTTGCCTC TCCCCTGCCTGGCTCACCACCTCCAACAGTGGCTTTGCCTC < 41bp 0.548161180941203 0.803194725763438 0.22779676 0.97660536 prediction 0.51006708964447 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130714 chr1:161130715 synonymous SNV . 0 22 hm5C_associated_SNPs_107362 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:161130715-161130716
64251 chr12 57969038 57969038 1 + C G HNSC 57969034 + 57969014 57969054 41 ACCGGGCGGGAGCTCTCATCCTGCCAGCTCCTCATCTCTCA ACCGGGCGGGAGCTCTCATCCTGCGAGCTCCTCATCTCTCA < 41bp 0.580879905267769 0.835896441021221 0.17364919 0.37133798 prediction 0.510033071506905 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57969034 chr12:57969038 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_107363 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:57969011-57969049
64251 chr17 41571178 41571178 1 + C T SKCM 41571177 + 41571157 41571197 41 ACTTGTCCCTTGTCAGTGCTCCTGAAGTAGAGGACGACTCA ACTTGTCCCTTGTCAGTGCTCTTGAAGTAGAGGACGACTCA < 41bp 0.507218873145082 0.762214111062253 0.07857719 0.084349364 prediction 0.509990475834341 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41571177 chr17:41571178 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_107366 0 0 1 GRWD1 POSTAR2 ENCODE chr17:41571156-41571236
64251 chr1 1336372 1336372 1 + C G rs551796448 1336371 + 1336351 1336391 41 CTGTTGTCCAGGACTGTTTACCAAGGGCTGACAGGCACTGA CTGTTGTCCAGGACTGTTTACGAAGGGCTGACAGGCACTGA < 41bp 0.466908738287305 0.754988007254936 0.88536674 0.8837679 prediction 0.509976014509872 Functional Gain - LOC148413 ENSG00000224870 UTR3 Human processed_transcript chr1:1336371 chr1:1336372 . . 0 22 hm5C_associated_SNPs_107368 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:1336360-1336380
64251 chr2 18112727 18112727 1 + T G HNSC 18112724 + 18112704 18112744 41 CTCCTCGTTTGAAGAGTCGTCTCTGTTTGAGAAAGAGCTGG CTCCTCGTTTGAAGAGTCGTCTCGGTTTGAGAAAGAGCTGG < 41bp 0.366894435907859 0.754985805432264 0.033194005 0.17709315 prediction 0.509971610864528 Functional Gain - KCNS3 ENSG00000170745 CDS Human protein_coding chr2:18112724 chr2:18112727 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_107369 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:18112723-18112757
64251 chr3 47448093 47448093 1 + C G HNSC 47448089 + 47448069 47448109 41 GATGAAGATCTACTACTTCGCAGCCGTGGCTCATGTGAGGG GATGAAGATCTACTACTTCGCAGCGGTGGCTCATGTGAGGG < 41bp 0.461861086917888 0.754976482987087 0.30999976 0.8515073 prediction 0.509952965974174 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47448089 chr3:47448093 synonymous SNV . 0 25 hm5C_associated_SNPs_107372 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:47448079-47448098
64251 chr21 47552201 47552201 1 + C G rs117725825 47552200 + 47552180 47552220 41 TCAATGCCATCGTGCGCAGCCCGCGTGGCGGGGCCCGGAGG TCAATGCCATCGTGCGCAGCCGGCGTGGCGGGGCCCGGAGG < 41bp 0.58405124495533 0.839017432802003 0.26232797 0.6792917 prediction 0.509932375693346 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552200 chr21:47552201 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_107374 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:47552172-47552227
64251 chr5 434306 434306 1 + C T SKCM 434305 + 434285 434325 41 ACCCTCCCCTCTGCCACTTTCCCCAGAGGAGCCTGCAGCAC ACCCTCCCCTCTGCCACTTTCTCCAGAGGAGCCTGCAGCAC < 41bp 0.520203804224124 0.775147676523724 0.30563506 0.95718515 prediction 0.509887744599199 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:434305 chr5:434306 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_107379 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:434266-434309
64251 chr22 43559152 43559152 1 + C G rs373324032 43559151 + 43559131 43559171 41 AGAGGTGGCCCCACCTGAGCCCCCACCCGGGAGCAGTGTCC AGAGGTGGCCCCACCTGAGCCGCCACCCGGGAGCAGTGTCC < 41bp 0.535598353659761 0.79050842360347 0.09864536 0.8442532 prediction 0.509820139887419 Functional Gain - TSPO ENSG00000100300 UTR3 Human protein_coding chr22:43559151 chr22:43559152 . . 0 22 hm5C_associated_SNPs_107381 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:43558994-43559226
64251 chr16 30980721 30980721 1 + C T LUSC 30980720 + 30980700 30980740 41 GGCAAGACCCAGGGCAAGCACCGCAAGTCCTTTGCTCTGGA GGCAAGACCCAGGGCAAGCACTGCAAGTCCTTTGCTCTGGA < 41bp 0.523360101033975 0.778253673710311 0.30311337 0.2631122 prediction 0.509787145352672 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30980720 chr16:30980721 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_107382 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:30980720-30980740
64251 chr2 216176824 216176824 1 + C G rs28366035 216176823 + 216176803 216176843 41 TACCTGCGCACGTGGTGCCGCCGCTGCTGCCTCCCGCTCGC TACCTGCGCACGTGGTGCCGCGGCTGCTGCCTCCCGCTCGC < 41bp 0.456731105040543 0.754863401147868 0.5386634 0.871122 prediction 0.509726802295735 Functional Gain - ATIC ENSG00000138363 UTR5 Human protein_coding chr2:216176823 chr2:216176824 . . 0 22 hm5C_associated_SNPs_107389 0 0 4 DDX3X POSTAR2 ENCODE chr2:216176797-216176886
64251 chr7 150069034 150069034 1 + C A LUSC 150069030 + 150069010 150069050 41 CCGGTGGAGATGCCGTCGACCGCCCCTTCCAGTGTGCCTGT CCGGTGGAGATGCCGTCGACCGCCACTTCCAGTGTGCCTGT < 41bp 0.661097353172213 0.915947287163012 0.14101979 0.6595962 prediction 0.509699867981599 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150069030 chr7:150069034 nonsynonymous SNV 0.604 3 25 hm5C_associated_SNPs_107390 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150069018-150069039
64251 chr2 170591661 170591661 1 + T G LUAD 170591659 + 170591639 170591679 41 ACTCTTCAGTGTCCTTCAGGCATAATTTTCCATTGTCACCG ACTCTTCAGTGTCCTTCAGGCAGAATTTTCCATTGTCACCG < 41bp 0.425583571175147 0.754837905520248 0.07085425 0.15174165 prediction 0.509675811040495 Functional Gain - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 CDS Human protein_coding chr2:170591659 chr2:170591661 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_107395 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:170591525-170591678
64251 chr8 11644438 11644438 1 + C G rs535687631 11644434 + 11644414 11644454 41 GTTGGGACCACGGGTGTGAGCCACCGCGCCCAGCTAGCTCC GTTGGGACCACGGGTGTGAGCCACGGCGCCCAGCTAGCTCC < 41bp 0.479798029920999 0.75483072032563 0.082710326 0.30802536 prediction 0.509661440651261 Functional Gain - NEIL2 ENSG00000154328 UTR3 Human protein_coding chr8:11644434 chr8:11644438 . . 0 25 hm5C_associated_SNPs_107398 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:11644388-11644455
64251 chr5 54720592 54720592 1 + T G COAD 54720589 + 54720569 54720609 41 ATATTGTGTTTGCTGCCAGCCTCTACTTGTAGAGTCAGCTA ATATTGTGTTTGCTGCCAGCCTCGACTTGTAGAGTCAGCTA < 41bp 0.399523460617832 0.754826131179285 0.26344025 0.1773333 prediction 0.509652262358569 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54720589 chr5:54720592 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_107400 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54720559-54720621
64251 chr14 95030285 95030285 1 + C A LUSC 95030284 + 95030264 95030304 41 CTGAAGTTCCTTGCAAAATTCCTGAATGACACCATGGCCGT CTGAAGTTCCTTGCAAAATTCATGAATGACACCATGGCCGT < 41bp 0.524092702313935 0.778893559222083 0.19257867 0.32768112 prediction 0.509601713816296 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030284 chr14:95030285 nonsynonymous SNV 0.000 3 22 hm5C_associated_SNPs_107405 0 0 1 DKC1 POSTAR2 ENCODE chr14:95030235-95030321
64251 chr13 46092966 46092966 1 + T C SKCM 46092964 + 46092944 46092984 41 AGGCTGAATAGCAACAATGCCTTGATAGAGTTCTTGTTGGA AGGCTGAATAGCAACAATGCCTCGATAGAGTTCTTGTTGGA < 41bp 0.583746465233759 0.838526071032536 0.103628516 0.8298319 prediction 0.509559211597555 Functional Gain - COG3 ENSG00000136152 CDS Human protein_coding chr13:46092964 chr13:46092966 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_107406 0 0 1 PPIG POSTAR2 ENCODE chr13:46092946-46092985
64251 chr4 41258978 41258978 1 + C A rs9321 41258974 + 41258954 41258994 41 TCGTCTTCCCTAGGCTATTTCTGCCGGGCGCTCCGCGAAGA TCGTCTTCCCTAGGCTATTTCTGCAGGGCGCTCCGCGAAGA < 41bp 0.65003029139548 0.90479987817315 0.14496532 0.18754143 prediction 0.509539173555339 Functional Gain - UCHL1 ENSG00000154277 UTR5 Human protein_coding chr4:41258974 chr4:41258978 . . 0 25 hm5C_associated_SNPs_107407 0 0 40 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:41258967-41258988
64251 chr11 61563621 61563621 1 + T A BRCA 61563617 + 61563597 61563637 41 GCATCGAGGAGATCGTGCGGCGACTTGACCCCAACAAGTAC GCATCGAGGAGATCGTGCGGCGACATGACCCCAACAAGTAC < 41bp 0.418412087796006 0.754742769382832 0.18579674 0.17409831 prediction 0.509485538765665 Functional Gain - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563617 chr11:61563621 nonsynonymous SNV 0.779 3 25 hm5C_associated_SNPs_107414 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:61563587-61563636
64251 chr20 34203979 34203979 1 + C A LUSC 34203975 + 34203955 34203995 41 CTCGTCCTCGCGCAAGCACACGCCCAACTTTTTCAGCGAGA CTCGTCCTCGCGCAAGCACACGCCAAACTTTTTCAGCGAGA < 41bp 0.347315994207309 0.754733108898691 0.14934757 0.40511206 prediction 0.509466217797383 Functional Gain - SPAG4 ENSG00000061656 CDS Human protein_coding chr20:34203975 chr20:34203979 synonymous SNV . 0 25 hm5C_associated_SNPs_107417 0 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr20:34203953-34203985
64251 chr17 49338178 49338178 1 + T G COAD 49338176 + 49338156 49338196 41 CGGCTCCGGCAGCGGAACCGCCTGAGGCTGGAGGAGGACAA CGGCTCCGGCAGCGGAACCGCCGGAGGCTGGAGGAGGACAA < 41bp 0.636036612158893 0.890761690447275 0.6485858 0.8959992 prediction 0.509450156576763 Functional Gain - UTP18 ENSG00000011260 CDS Human protein_coding chr17:49338176 chr17:49338178 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_107419 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:49338178-49338179
64251 chr10 102822575 102822575 1 + T G rs11547671 102822573 + 102822553 102822593 41 GGCGGGCAGGGTGCGCGACGCGTGCGGCTGCTGCTGGGAAT GGCGGGCAGGGTGCGCGACGCGGGCGGCTGCTGCTGGGAAT < 41bp 0.633560533508525 0.888280580188084 0.5084068 0.9023846 prediction 0.509440093359117 Functional Gain - KAZALD1 ENSG00000107821 CDS Human protein_coding chr10:102822573 chr10:102822575 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_107420 0 0 2 CSTF2T POSTAR2 ENCODE chr10:102822565-102822606
64251 chr20 3782684 3782684 1 + C G rs61746575 3782680 + 3782660 3782700 41 GCGGCCCCAGGACAGGGACACGCCCGTGCAGAATAAGCGGA GCGGCCCCAGGACAGGGACACGCCGGTGCAGAATAAGCGGA < 41bp 0.475493358412616 0.754715304291525 0.1394172 0.2770778 prediction 0.50943060858305 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3782680 chr20:3782684 synonymous SNV . 0 25 hm5C_associated_SNPs_107421 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3782663-3782711
64251 chr3 9691417 9691417 1 + C A HNSC 9691413 + 9691393 9691433 41 GGCCAAGGATGGCAGCGGGACCGGCGGCTCTAAGGTGAGAT GGCCAAGGATGGCAGCGGGACCGGAGGCTCTAAGGTGAGAT < 41bp 0.369283802393154 0.754694964769606 0.76269627 0.8627933 prediction 0.509389929539211 Functional Gain - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9691413 chr3:9691417 synonymous SNV . 0 25 hm5C_associated_SNPs_107428 0 0 3 DDX3X POSTAR2 ENCODE chr3:9691344-9691431
64251 chr5 156712439 156712439 1 + C T LUSC 156712438 + 156712418 156712458 41 TGCTTGAAGAGCTTCCCCTCCCCGACCAGCAGCCATGCATC TGCTTGAAGAGCTTCCCCTCCTCGACCAGCAGCCATGCATC < 41bp 0.532807160807937 0.787495939806175 0.38641226 0.80316794 prediction 0.509377557996475 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156712438 chr5:156712439 nonsynonymous SNV 0.940 3 22 hm5C_associated_SNPs_107430 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:156712411-156712441
64251 chr7 89854697 89854697 1 + C A UCEC 89854693 + 89854673 89854713 41 ATACACAGAGAACATTATACCTCCCTGTGGGACCTGAGACA ATACACAGAGAACATTATACCTCCATGTGGGACCTGAGACA < 41bp 0.323814707229942 0.754657544981084 0.059499145 0.9657254 prediction 0.509315089962167 Functional Gain - STEAP2 ENSG00000157214 CDS Human protein_coding chr7:89854693 chr7:89854697 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_107434 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr7:89854670-89854701
64251 chr17 78939517 78939517 1 + C G rs548067095 78939513 + 78939493 78939533 41 TCTTCTGGGTGGATGGAACCCTGCCTGGTCACATTTGGCCA TCTTCTGGGTGGATGGAACCCTGCGTGGTCACATTTGGCCA < 41bp 0.494415450556769 0.754641790016259 0.04274103 0.19666165 prediction 0.509283580032518 Functional Gain - RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78939513 chr17:78939517 . . 0 25 hm5C_associated_SNPs_107438 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:78939486-78939522
64251 chr3 193355797 193355797 1 + C G KIRC 193355796 + 193355776 193355816 41 TAGTGTGTTGGAAATGATTGCCCAAGCTCGAATATTCCCAA TAGTGTGTTGGAAATGATTGCGCAAGCTCGAATATTCCCAA < 41bp 0.458927972658608 0.754639134681976 0.15572083 0.21115103 prediction 0.509278269363952 Functional Gain - OPA1 ENSG00000198836 CDS Human protein_coding chr3:193355796 chr3:193355797 synonymous SNV . 0 22 hm5C_associated_SNPs_107439 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:193355751-193355803
64251 chr19 54697191 54697191 1 + T A SKCM 54697187 + 54697167 54697207 41 CCTGATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAG CCTGATGGTAAGGTGGTCTACACCACCCTGCAATGGGCCAG < 41bp 0.615532584004834 0.870115548354213 0.015846848 0.03671801 prediction 0.509165928698758 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54697187 chr19:54697191 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_107447 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:54697170-54697196
64251 chr7 150773473 150773473 1 + C G rs569148643 150773472 + 150773452 150773492 41 TAGCCGCCACCGAGGGACAGCCGAGGGACCGATGGACGAGG TAGCCGCCACCGAGGGACAGCGGAGGGACCGATGGACGAGG < 41bp 0.447159204107021 0.754563910423295 0.72659534 0.8468629 prediction 0.50912782084659 Functional Gain - SLC4A2 ENSG00000244151 ncRNA_exonic Human antisense chr7:150773472 chr7:150773473 . . 0 22 hm5C_associated_SNPs_107450 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr7:150773425-150773474
64251 chr1 235505468 235505468 1 + T C UCEC 235505466 + 235505446 235505486 41 GTCATCAATTCTGCCAATTACGTGTATTTCCTTGGCTTGGA GTCATCAATTCTGCCAATTACGCGTATTTCCTTGGCTTGGA < 41bp 0.524110335156342 0.778663220876807 0.274832 0.22871533 prediction 0.50910577144093 Functional Gain - GGPS1 ENSG00000152904 CDS Human protein_coding chr1:235505466 chr1:235505468 nonsynonymous SNV 0.571 1 23 hm5C_associated_SNPs_107452 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:235505460-235505480
64251 chr2 159481558 159481558 1 + C T SKCM 159481557 + 159481537 159481577 41 ACCGACCCCCGACCTCTGAACCCCAGTGCATATTCCTCCAC ACCGACCCCCGACCTCTGAACTCCAGTGCATATTCCTCCAC < 41bp 0.538391947125879 0.792943973247648 0.2484084 0.9094682 prediction 0.509104052243539 Functional Gain - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159481557 chr2:159481558 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_107453 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:159481549-159481560
64251 chr1 1469944 1469944 1 + C G rs537109895 1469943 + 1469923 1469963 41 ATCTTTCACACACTGGTGACCCTGAGAGAGGAGGGAGGAGG ATCTTTCACACACTGGTGACCGTGAGAGAGGAGGGAGGAGG < 41bp 0.500442265139356 0.754983639451783 0.18470576 0.32424426 prediction 0.509082748624852 Functional Gain - ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469943 chr1:1469944 . . 0 22 hm5C_associated_SNPs_107455 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:1469940-1469960
64251 chr3 127379873 127379873 1 + C T SKCM 127379872 + 127379852 127379892 41 CTCTAGAACCTCAGCCTCTTCCCCACTGGCCCCTGGAGACA CTCTAGAACCTCAGCCTCTTCTCCACTGGCCCCTGGAGACA < 41bp 0.494971874353626 0.75454048613127 0.05683735 0.9565455 prediction 0.50908097226254 Functional Gain - PODXL2 ENSG00000114631 CDS Human protein_coding chr3:127379872 chr3:127379873 synonymous SNV . 0 22 hm5C_associated_SNPs_107456 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr3:127379839-127379877
64251 chr20 61296383 61296383 1 + C T SKCM 61296382 + 61296362 61296402 41 ACCGGCATGTCCACGTTCAGCCCCAAGTTCTTGGAGTCCCA ACCGGCATGTCCACGTTCAGCTCCAAGTTCTTGGAGTCCCA < 41bp 0.533241371593883 0.787774632098552 0.06948307 0.4368627 prediction 0.509066521009339 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296382 chr20:61296383 nonsynonymous SNV 0.316 2 22 hm5C_associated_SNPs_107459 0 0 2 PPIG POSTAR2 ENCODE chr20:61296378-61296435
64251 chr14 21460308 21460308 1 + T G UCEC 21460306 + 21460286 21460326 41 TATCTCAGACAGAGGAGAAACTTCGTGGAGCAGTGCTACAC TATCTCAGACAGAGGAGAAACTGCGTGGAGCAGTGCTACAC < 41bp 0.612210571443304 0.866716888201167 0.17013392 0.26307496 prediction 0.509012633515726 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21460306 chr14:21460308 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_107466 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:21460288-21460325
64251 chr19 16952676 16952676 1 + T C UCEC 16952674 + 16952654 16952694 41 GTGCCCCTGGAGTCCGATTCCGTGGAATTCAACAACGCCAT GTGCCCCTGGAGTCCGATTCCGCGGAATTCAACAACGCCAT < 41bp 0.5396096172062 0.794115224475749 0.3413056 0.39389393 prediction 0.509011214539098 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16952674 chr19:16952676 nonsynonymous SNV 0.832 2 23 hm5C_associated_SNPs_107467 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:16952648-16952693
64251 chr6 108616295 108616295 1 + C G LUAD 108616294 + 108616274 108616314 41 GGAGTTCAAGATGGCGGCCTCCTGGTCGCTCTTGGTTACCC GGAGTTCAAGATGGCGGCCTCGTGGTCGCTCTTGGTTACCC < 41bp 0.448147151501697 0.754478798316962 0.2730151 0.79129285 prediction 0.508957596633924 Functional Gain - AFG1L ENSG00000135537 CDS Human protein_coding chr6:108616294 chr6:108616295 synonymous SNV . 0 22 hm5C_associated_SNPs_107472 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:108616282-108616307
64251 chrX 101971015 101971015 1 + C G HNSC 101971011 + 101970991 101971031 41 TTTGGAGGGTGGAGCTTCAGCAATCTGTGAATCTGAGCCAG TTTGGAGGGTGGAGCTTCAGCAATGTGTGAATCTGAGCCAG < 41bp 0.449893214204704 0.754476621276976 0.21669748 0.43860674 prediction 0.508953242553952 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971011 chrX:101971015 nonsynonymous SNV 0.989 0 25 hm5C_associated_SNPs_107474 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:101970980-101971019
64251 chr16 29706325 29706325 1 + C G BRCA 29706321 + 29706301 29706341 41 CTGCAGTGGCATTGCCAGTGCTGCCGCCGCTGCAGTGGAGG CTGCAGTGGCATTGCCAGTGCTGCGGCCGCTGCAGTGGAGG < 41bp 0.554758797787393 0.809227771005925 0.21426606 0.31616887 prediction 0.508937946437063 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706321 chr16:29706325 synonymous SNV . 0 25 hm5C_associated_SNPs_107478 0 0 3 RPS3 POSTAR2 ENCODE chr16:29706320-29706389
64251 chr1 84543879 84543879 1 + T A rs112683800 84543875 + 84543855 84543895 41 GCCCGGTCTTCGCGCCCGGACTCCTGGCGCCAGCGCTAGGC GCCCGGTCTTCGCGCCCGGACTCCAGGCGCCAGCGCTAGGC < 41bp 0.488085782151354 0.754468066706899 0.2535096 0.93546265 prediction 0.508936133413798 Functional Gain - PRKACB ENSG00000142875 UTR5 Human protein_coding chr1:84543875 chr1:84543879 . . 0 25 hm5C_associated_SNPs_107479 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:84543868-84543889
64251 chr12 65564510 65564510 1 + C A UCEC 65564506 + 65564486 65564526 41 GCCACTTACTGACATGGACTCAACCTTGGATTCGTCAACAG GCCACTTACTGACATGGACTCAACATTGGATTCGTCAACAG < 41bp 0.350850108416078 0.754401845310393 0.023276448 0.06450102 prediction 0.508803690620786 Functional Gain - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65564506 chr12:65564510 synonymous SNV . 0 25 hm5C_associated_SNPs_107488 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:65564457-65564536
64251 chr17 43227163 43227163 1 + C G rs146567854 43227159 + 43227139 43227179 41 CGCCAAGGGCCAGCCGGTCGCGCCCTATAACACCACGCAGT CGCCAAGGGCCAGCCGGTCGCGCCGTATAACACCACGCAGT < 41bp 0.550335211579022 0.804724263093086 0.14629826 0.29048705 prediction 0.508778103028127 Functional Gain - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43227159 chr17:43227163 synonymous SNV . 0 25 hm5C_associated_SNPs_107490 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:43227142-43227165
64251 chr19 1393357 1393357 1 - G T THYM 1393361 - 1393341 1393381 41 GGCGCTGGCCCTGTCTCCAGCTCCCTCGTGGGCGGTGCGGT GGCGCTGGCCCTGTCTCCAGCTCCATCGTGGGCGGTGCGGT < 41bp 0.358592414848829 0.754376054352625 0.067569554 0.7640929 prediction 0.50875210870525 Functional Gain - NDUFS7 ENSG00000115286 CDS Human protein_coding chr19:1393361 chr19:1393357 nonsynonymous SNV 0.003 1 25 hm5C_associated_SNPs_107491 0 0 1 EIF3H POSTAR2 ENCODE chr19:1393317-1393370
64251 chr20 13107341 13107341 1 + T C STAD 13107339 + 13107319 13107359 41 ATCAGATCACTAAAACTTATCATGGGACTGGATGGGACCAC ATCAGATCACTAAAACTTATCACGGGACTGGATGGGACCAC < 41bp 0.484307988265523 0.754367319246636 0.89644176 0.87889826 prediction 0.508734638493273 Functional Gain - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13107339 chr20:13107341 nonsynonymous SNV 0.915 2 23 hm5C_associated_SNPs_107492 0 0 2 PRPF8 POSTAR2 ENCODE chr20:13107329-13107412
64251 chr11 73964702 73964702 1 + C G rs80199049 73964698 + 73964678 73964718 41 ACGGGCACCCCGAGATGTACCAACCTTTTCATGTATTCTGC ACGGGCACCCCGAGATGTACCAACGTTTTCATGTATTCTGC < 41bp 0.452623196363315 0.754358478170641 0.22959438 0.59555924 prediction 0.508716956341282 Functional Gain - PPME1 ENSG00000214517 UTR3 Human protein_coding chr11:73964698 chr11:73964702 . . 0 25 hm5C_associated_SNPs_107495 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:73964692-73964715
64251 chr1 11718605 11718605 1 + C A PAAD 11718604 + 11718584 11718624 41 CCCCAGCACCTGCCTCAAGTCCCAGGTGGTGGACCTCAAGG CCCCAGCACCTGCCTCAAGTCACAGGTGGTGGACCTCAAGG < 41bp 0.503388883587851 0.757740628215199 0.19430804 0.41762435 prediction 0.508703489254694 Functional Gain - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718604 chr1:11718605 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_107496 0 0 9 BUD13 POSTAR2 ENCODE chr1:11718552-11718629
64251 chr4 75973602 75973602 1 + C G rs140145727 75973601 + 75973581 75973621 41 AAAAAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTGGCC AAAAAAAGGGCAGCAAATGACGAAGGGCGCCCCTTCTGGCC < 41bp 0.556987401521657 0.811335061530496 0.22542357 0.8152715 prediction 0.508695320017679 Functional Gain - PARM1 ENSG00000169116 UTR3 Human protein_coding chr4:75973601 chr4:75973602 . . 0 22 hm5C_associated_SNPs_107497 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:75973582-75973641
64251 chr1 238090465 238090465 1 + C A LUAD 238090464 + 238090444 238090484 41 GATCGAGGCCTGCCCGAACCCCAAGGCCAACAGAGAGAAGA GATCGAGGCCTGCCCGAACCCAAAGGCCAACAGAGAGAAGA < 41bp 0.504909157786349 0.759208890270159 0.2586932 0.43098634 prediction 0.50859946496762 Functional Gain - LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090464 chr1:238090465 . . 0 22 hm5C_associated_SNPs_107501 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:238090460-238090480
64251 chr22 45929715 45929715 1 + C T COAD 45929714 + 45929694 45929734 41 ATCAACACAGTGGGCTCTTTCCGCTGCCAGCGGGACAGCAG ATCAACACAGTGGGCTCTTTCTGCTGCCAGCGGGACAGCAG < 41bp 0.513710109665114 0.768004435617586 0.51321006 0.2744525 prediction 0.508588651904945 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45929714 chr22:45929715 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_107503 0 0 1 RPS3 POSTAR2 ENCODE chr22:45929698-45929744
64251 chr12 110024578 110024578 1 + T C BLCA 110024576 + 110024556 110024596 41 TAGGAGGAGCCCTCCGATACCATCAAGGGAAGATTTCATCC TAGGAGGAGCCCTCCGATACCACCAAGGGAAGATTTCATCC < 41bp 0.560612566309925 0.814905922759598 0.109994054 0.23332375 prediction 0.508586712899348 Functional Gain - MVK ENSG00000110921 CDS Human protein_coding chr12:110024576 chr12:110024578 synonymous SNV . 0 23 hm5C_associated_SNPs_107504 0 0 5 BUD13 POSTAR2 ENCODE chr12:110024570-110024672
64251 chr19 19212614 19212614 1 + T A STAD 19212610 + 19212590 19212630 41 CGTGACCACAGGCAAGTGCTCAGCTCCCTGCTGTCTGGGGC CGTGACCACAGGCAAGTGCTCAGCACCCTGCTGTCTGGGGC < 41bp 0.4259610562774 0.754284188968048 0.68058044 0.49508122 prediction 0.508568377936095 Functional Gain - SLC25A42 ENSG00000181035 CDS Human protein_coding chr19:19212610 chr19:19212614 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_107507 0 0 6 BUD13 POSTAR2 ENCODE chr19:19212569-19212643
64251 chr14 64909115 64909115 1 + C T UCEC 64909114 + 64909094 64909134 41 CTCAAGATGCACGGGGGCGGCCCCACGGTGAGTGGTGGGTT CTCAAGATGCACGGGGGCGGCTCCACGGTGAGTGGTGGGTT < 41bp 0.537395612787774 0.791654349260988 0.821502 0.9252401 prediction 0.508517472946429 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64909114 chr14:64909115 nonsynonymous SNV 0.970 2 22 hm5C_associated_SNPs_107510 0 0 3 FXR2 POSTAR2 ENCODE chr14:64909092-64909121
64251 chr12 118575944 118575944 1 + C T SKCM 118575943 + 118575923 118575963 41 ATGCTCCCAGCAGGAAGGATCCCAAATACAGGTGAGAGGTG ATGCTCCCAGCAGGAAGGATCTCAAATACAGGTGAGAGGTG < 41bp 0.51400971267938 0.768259742662405 0.15740398 0.69359887 prediction 0.50850005996605 Functional Gain - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118575943 chr12:118575944 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_107511 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:118575900-118575945
64251 chr17 40460389 40460389 1 + C G rs144829445 40460388 + 40460368 40460408 41 GACCCTGCCGGCTGACTCCCCCGGGCTCTTCCCCAGCCCAT GACCCTGCCGGCTGACTCCCCGGGGCTCTTCCCCAGCCCAT < 41bp 0.450085656521527 0.754240064302038 0.9149008 0.9360522 prediction 0.508480128604077 Functional Gain - STAT5A ENSG00000126561 intronic Human protein_coding chr17:40460388 chr17:40460389 . . 0 22 hm5C_associated_SNPs_107512 0 0 3 PRPF8 POSTAR2 ENCODE chr17:40460344-40460394
64251 chr12 7290621 7290621 1 + T C STAD 7290619 + 7290599 7290639 41 CCTTCCTCTACTGGCCCCTGCTTGAGAGTGCCCGCCCAGTC CCTTCCTCTACTGGCCCCTGCTCGAGAGTGCCCGCCCAGTC < 41bp 0.571769774524398 0.825965420310056 0.067599624 0.16824642 prediction 0.508391291571315 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7290619 chr12:7290621 synonymous SNV . 0 23 hm5C_associated_SNPs_107519 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486177 chr12:7290620-7290621
64251 chr11 82879770 82879770 1 + T A LUAD 82879766 + 82879746 82879786 41 GGTTTGATGGGTCACCAGGACAAATGGGGGGAGGAGGCCCT GGTTTGATGGGTCACCAGGACAAAAGGGGGGAGGAGGCCCT < 41bp 0.429042288455174 0.754175044670454 0.66317016 0.41680008 prediction 0.508350089340909 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82879766 chr11:82879770 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_107524 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:82879760-82879780
64251 chr10 3151656 3151656 1 + T A rs202105167 3151652 + 3151632 3151672 41 ACCACGCCGTGCGCCTGCCGCTGATGGAGTGCGTGCAGATG ACCACGCCGTGCGCCTGCCGCTGAAGGAGTGCGTGCAGATG < 41bp 0.441990792866648 0.754158318619798 0.20544016 0.18770552 prediction 0.508316637239595 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3151652 chr10:3151656 nonsynonymous SNV 0.764 2 25 hm5C_associated_SNPs_107526 0 0 3 BUD13 POSTAR2 ENCODE chr10:3151643-3151719
64251 chr19 31039962 31039962 1 + C T SKCM 31039961 + 31039941 31039981 41 GCCCACTCTGAAGAGGATGTCCCCATCCTGATCCCCGAAAC GCCCACTCTGAAGAGGATGTCTCCATCCTGATCCCCGAAAC < 41bp 0.518070324634215 0.772223373448214 0.21955529 0.94046414 prediction 0.508306097627999 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:31039961 chr19:31039962 nonsynonymous SNV 0.677 0 22 hm5C_associated_SNPs_107528 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:31039956-31039967
64251 chr11 45949008 45949008 1 + C G rs185951842 45949004 + 45948984 45949024 41 GCTGCCCGGCAGGACGTGGCCTACCATGTGGTGTACCGTGA GCTGCCCGGCAGGACGTGGCCTACGATGTGGTGTACCGTGA < 41bp 0.469345873203085 0.754145872268325 0.0137556195 0.03688115 prediction 0.508291744536651 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949004 chr11:45949008 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_107530 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:45948987-45949011
64251 chr19 36124064 36124064 1 + T G LUSC 36124062 + 36124042 36124082 41 CCCTCGTGGGCCCCCCTCTGCCTGGGCCCCCTGGACCACCC CCCTCGTGGGCCCCCCTCTGCCGGGGCCCCCTGGACCACCC < 41bp 0.643395962935587 0.897529263430982 0.15108341 0.92896765 prediction 0.508266600990791 Functional Gain - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124062 chr19:36124064 synonymous SNV . 0 23 hm5C_associated_SNPs_107531 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36124057-36124085
64251 chr11 710154 710154 1 + C G rs185291412 710153 + 710133 710173 41 CCCTCCGGGACAGAAACCCCCCGGGCACAGGCTGCTGGTCC CCCTCCGGGACAGAAACCCCCGGGGCACAGGCTGCTGGTCC < 41bp 0.546544794358292 0.800637581035855 0.8503909 0.93518376 prediction 0.508185573355126 Functional Gain - EPS8L2 ENSG00000269915 ncRNA_intronic Human antisense chr11:710153 chr11:710154 . . 0 22 hm5C_associated_SNPs_107535 0 0 5 DDX59 POSTAR2 ENCODE chr11:710098-710181
64251 chr16 27375239 27375239 1 + C G rs2234924 27375235 + 27375215 27375255 41 GCCACCTCCTGGAAGGCAGCCAGGCTGGCAGATTTCCAAAA GCCACCTCCTGGAAGGCAGCCAGGGTGGCAGATTTCCAAAA < 41bp 0.571141513478156 0.825226397113716 0.4504259 0.88619864 prediction 0.50816976727112 Functional Gain - IL4R ENSG00000077238 UTR3 Human protein_coding chr16:27375235 chr16:27375239 . . 0 25 hm5C_associated_SNPs_107537 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:27375226-27375256
64251 chr4 8443034 8443034 1 + C A rs61733546 8443030 + 8443010 8443050 41 CCCGTGGCAATTCGGAGTTGCTGGCCTTCCTCACCAGCTCC CCCGTGGCAATTCGGAGTTGCTGGACTTCCTCACCAGCTCC < 41bp 0.362538622185719 0.754053248623799 0.1635148 0.8008977 prediction 0.508106497247597 Functional Gain - TRMT44 ENSG00000155275 CDS Human protein_coding chr4:8443030 chr4:8443034 nonsynonymous SNV 0.752 0 25 hm5C_associated_SNPs_107541 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:8443034-8443060
64251 chr3 195953863 195953863 1 + C A LUSC 195953859 + 195953839 195953879 41 TGGGCCCTGTGGAACTTGCCCTCACTAGCATCCTGACCTTG TGGGCCCTGTGGAACTTGCCCTCAATAGCATCCTGACCTTG < 41bp 0.32379407081067 0.754046275784704 0.0704841 0.036477953 prediction 0.508092551569409 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195953859 chr3:195953863 nonsynonymous SNV 0.596 0 25 hm5C_associated_SNPs_107542 0 0 1 GRWD1 POSTAR2 ENCODE chr3:195953859-195953920
64251 chr4 100521862 100521862 1 + C T UCEC 100521861 + 100521841 100521881 41 CCTGTGGATTTGCTTCTCATCCCAATGAAGAACTCCTGAGA CCTGTGGATTTGCTTCTCATCTCAATGAAGAACTCCTGAGA < 41bp 0.500003020688637 0.754044064218108 0.0662823 0.053893596 prediction 0.508082087058941 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100521861 chr4:100521862 nonsynonymous SNV 0.941 4 22 hm5C_associated_SNPs_107544 0 0 3 AGGF1 POSTAR2 ENCODE chr4:100521825-100521891
64251 chr15 40711270 40711270 1 + C G rs2075625 40711266 + 40711246 40711286 41 AATTACTTGAACCCAGGAGGCGGACGTTGCAGTGAGCCGAG AATTACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCGAG < 41bp 0.564773652375691 0.818809815343552 0.9091654 0.93673563 prediction 0.508072325935722 Functional Gain - IVD ENSG00000128928 UTR3 Human protein_coding chr15:40711266 chr15:40711270 . . 0 25 hm5C_associated_SNPs_107545 1 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:40711220-40711270
64251 chr20 61598796 61598796 1 + C A UCEC 61598795 + 61598775 61598815 41 AACCTGGGGCTGTGCACCTTCCTGGTGTTTGGACAGGCTCA AACCTGGGGCTGTGCACCTTCATGGTGTTTGGACAGGCTCA < 41bp 0.50026104340875 0.754289355627094 0.21717441 0.3302058 prediction 0.508056624436689 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598795 chr20:61598796 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_107547 0 0 7 EIF3H POSTAR2 ENCODE chr20:61598751-61598811
64251 chr1 100740390 100740390 1 + C T GBM 100740389 + 100740369 100740409 41 ACTTTTCATAGGGGATATTACCCAAAAGGGGGTGGTGAAGT ACTTTTCATAGGGGATATTACTCAAAAGGGGGTGGTGAAGT < 41bp 0.505452393495692 0.759448726049401 0.12814516 0.27063572 prediction 0.507992665107418 Functional Gain - RTCA ENSG00000137996 CDS Human protein_coding chr1:100740389 chr1:100740390 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_107550 0 0 6 LIN28A POSTAR2 GSE39873,GSM980594 chr1:100740380-100740400
64251 chr10 134219536 134219536 1 + T C UCEC 134219534 + 134219514 134219554 41 TGGCCGGCGCGTGTTCTTGACATCAGTCTCGGCCAGAAGGA TGGCCGGCGCGTGTTCTTGACACCAGTCTCGGCCAGAAGGA < 41bp 0.531747916330051 0.785725649032905 0.27817175 0.334812 prediction 0.507955465405706 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219534 chr10:134219536 nonsynonymous SNV 0.987 1 23 hm5C_associated_SNPs_107553 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:134219536-134219537
64251 chr3 101574609 101574609 1 + C T SKCM 101574608 + 101574588 101574628 41 CTTCACTGTGCAGTCATAGCCCACAATGCTGTGGTCCATGA CTTCACTGTGCAGTCATAGCCTACAATGCTGTGGTCCATGA < 41bp 0.535666086760905 0.789640774172488 0.029360324 0.88752294 prediction 0.507949374823167 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101574608 chr3:101574609 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_107554 0 0 3 EFTUD2 POSTAR2 ENCODE chr3:101574558-101574610
64251 chr2 36737231 36737231 1 + C G SKCM 36737230 + 36737210 36737250 41 TCTGTGAGTGCCGCCCAAGGCCCAAGAAGTGCAGACCCATA TCTGTGAGTGCCGCCCAAGGCGCAAGAAGTGCAGACCCATA < 41bp 0.452822993965951 0.753968870861277 0.013660818 0.055920184 prediction 0.507937741722555 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36737230 chr2:36737231 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_107557 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr2:36737221-36737242
64251 chr1 37940207 37940207 1 + C A rs555847817 37940203 + 37940183 37940223 41 GACTCGGCCCCATGGAGACGCCGCCGGCCGCCGCTGGCGCA GACTCGGCCCCATGGAGACGCCGCAGGCCGCCGCTGGCGCA < 41bp 0.432957292768433 0.75394982052505 0.27420413 0.33429307 prediction 0.5078996410501 Functional Gain - ZC3H12A ENSG00000163874 UTR5 Human protein_coding chr1:37940203 chr1:37940207 . . 0 25 hm5C_associated_SNPs_107559 0 0 2 NCBP2 POSTAR2 ENCODE chr1:37940180-37940231
64251 chr1 228327999 228327999 1 + C G rs4653908 228327998 + 228327978 228328018 41 TCAGTGGGCGGAAGAGGTGGCCCCGGATGCTGCGGCGCCCG TCAGTGGGCGGAAGAGGTGGCGCCGGATGCTGCGGCGCCCG < 41bp 0.556611760445542 0.810559017330265 0.8610865 0.8801372 prediction 0.507894513769447 Functional Gain - GUK1 ENSG00000143774 UTR5 Human protein_coding chr1:228327998 chr1:228327999 . . 0 22 hm5C_associated_SNPs_107560 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228327980-228328000
64251 chr9 130428533 130428533 1 + C G BRCA 130428529 + 130428509 130428549 41 TGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTG TGCTCCATGAATTGACTTTTCAGGGTATGAGTTATGATCTG < 41bp 0.567529701707349 0.82143101825026 0.47996986 0.8968749 prediction 0.507802633085823 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130428529 chr9:130428533 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_107565 0 0 2 TARDBP POSTAR2 E-MTAB-530,ERR039847-ERR039848 chr9:130428520-130428540
64251 chr5 10262641 10262641 1 + C A UCEC 10262637 + 10262617 10262657 41 CTTCACGATGCTTTGTGTGTCATCCGGAACCTCATCCGCGA CTTCACGATGCTTTGTGTGTCATCAGGAACCTCATCCGCGA < 41bp 0.340535024325741 0.753890816628778 0.053955287 0.065222085 prediction 0.507781633257556 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10262637 chr5:10262641 synonymous SNV . 0 25 hm5C_associated_SNPs_107567 0 0 26 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:10262603-10262659
64251 chr6 130381246 130381246 1 + T C rs7451021 130381244 + 130381224 130381264 41 TGAAATTAGAAGGCGTGGATCCTGAGCATCAGTCTGTGTAC TGAAATTAGAAGGCGTGGATCCCGAGCATCAGTCTGTGTAC < 41bp 0.469261196482101 0.753871348764679 0.06954396 0.22648314 prediction 0.507742697529357 Functional Gain - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130381244 chr6:130381246 synonymous SNV . 0 23 hm5C_associated_SNPs_107571 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:130381213-130381246
64251 chr5 64867906 64867906 1 + T A STAD 64867902 + 64867882 64867922 41 GATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCC GATTGAATACTGGACTGGGCCTCCACATGAATATAAATTCC < 41bp 0.401742234344549 0.753868815929456 0.052414536 0.899706 prediction 0.507737631858913 Functional Gain - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64867902 chr5:64867906 synonymous SNV . 0 25 hm5C_associated_SNPs_107572 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:64867870-64867911
64251 chr8 145730772 145730772 1 + C A UCEC 145730771 + 145730751 145730791 41 CTACCTGGACGAGGAGCGTGCCTGGGCGCTGGACGTGGCCG CTACCTGGACGAGGAGCGTGCATGGGCGCTGGACGTGGCCG < 41bp 0.502333041060126 0.75620097216685 0.55451447 0.74365497 prediction 0.507735862213449 Functional Gain - GPT ENSG00000167701 CDS Human protein_coding chr8:145730771 chr8:145730772 synonymous SNV . 0 22 hm5C_associated_SNPs_107573 0 0 1 SRSF1 POSTAR2 ENCODE chr8:145730744-145730814
64251 chr12 50453612 50453612 1 + C T OV 50453611 + 50453591 50453631 41 CTGCAGGACAAAGCCAACTTCCGCAGCTTCAAACCCAAACC CTGCAGGACAAAGCCAACTTCTGCAGCTTCAAACCCAAACC < 41bp 0.491157003251433 0.753853711066198 0.24677789 0.11371848 prediction 0.507707422132396 Functional Gain - ASIC1 ENSG00000110881 CDS Human protein_coding chr12:50453611 chr12:50453612 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_107577 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:50453603-50453635
64251 chr16 14755800 14755800 1 + C G KIRP 14755799 + 14755779 14755819 41 CTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTA CTATACGCCCTCAAGAGCTCCGCCAGGCTGAGTCTGCTCTA < 41bp 0.600096346946624 0.853946105033582 0.11641693 0.24802989 prediction 0.507699516173916 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755799 chr16:14755800 nonsynonymous SNV 0.349 4 22 hm5C_associated_SNPs_107578 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr16:14755778-14755804
64251 chr7 23221735 23221735 1 + C G PAAD 23221734 + 23221714 23221754 41 TGTCAATTCTTCCTTCAAGGCCGGTGCCGCTTTGGAGATCG TGTCAATTCTTCCTTCAAGGCGGGTGCCGCTTTGGAGATCG < 41bp 0.592063676884803 0.845905526397982 0.10089421 0.5935543 prediction 0.507683699026358 Functional Gain - NUPL2 ENSG00000136243 CDS Human protein_coding chr7:23221734 chr7:23221735 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_107581 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:23221727-23221765
64251 chr16 90033255 90033255 1 + C G rs4303487 90033254 + 90033234 90033274 41 ATTTCTTGGAACCAGATTTACCTGAGGAGCTCTGTCCTGCT ATTTCTTGGAACCAGATTTACGTGAGGAGCTCTGTCCTGCT < 41bp 0.563085362845207 0.816917470420085 0.41599628 0.6848232 prediction 0.507664215149756 Functional Gain - DEF8 ENSG00000140995 UTR3 Human protein_coding chr16:90033254 chr16:90033255 . . 0 22 hm5C_associated_SNPs_107582 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:90033233-90033271
64251 chr1 97235320 97235320 1 + T C LIHC 97235318 + 97235298 97235338 41 AAATGGATGGTGCTCCTTCTCGTGTACTTCATATTCGAAAA AAATGGATGGTGCTCCTTCTCGCGTACTTCATATTCGAAAA < 41bp 0.518320837025518 0.772139509269438 0.19648379 0.1408425 prediction 0.507637344487839 Functional Gain - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97235318 chr1:97235320 synonymous SNV . 0 23 hm5C_associated_SNPs_107584 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:97235308-97235335
64251 chr7 55468954 55468954 1 + C T LUAD 55468953 + 55468933 55468973 41 CCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGC CCGCTGTTGTACCAGTGGCACTGGAAGCAGTACGTTGGAGC < 41bp 0.502654144913202 0.756461183982283 0.2949046 0.26425707 prediction 0.507614078138163 Functional Gain - LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55468953 chr7:55468954 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_107586 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:55468947-55468970
64251 chr3 52514271 52514271 1 + C T rs71297399 52514270 + 52514250 52514290 41 CTCCCCTCCCACTGTGGCTCCCGCATCTGCCTCCCTGCCCC CTCCCCTCCCACTGTGGCTCCTGCATCTGCCTCCCTGCCCC < 41bp 0.488523359062773 0.753781786757212 0.06619036 0.10210419 prediction 0.507563573514423 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52514270 chr3:52514271 synonymous SNV . 0 22 hm5C_associated_SNPs_107590 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:52514220-52514280
64251 chr5 81268070 81268070 1 + C G rs111549985 81268069 + 81268049 81268089 41 CCAGCTCTCCTCCCCCTGGCCCCGTCGCCCCGCCCTCGCCG CCAGCTCTCCTCCCCCTGGCCGCGTCGCCCCGCCCTCGCCG < 41bp 0.491234724334391 0.753769496505105 0.24226618 0.24028146 prediction 0.507538993010211 Functional Gain - ATG10 ENSG00000152348 UTR5 Human protein_coding chr5:81268069 chr5:81268070 . . 0 22 hm5C_associated_SNPs_107592 0 1 1 XRN2 POSTAR2 ENCODE chr5:81268004-81268099
64251 chr19 36727458 36727458 1 + C G LUSC 36727454 + 36727434 36727474 41 TCACTGAGCATGAGCATTTTCACACGAGAGAGAAACCTTTT TCACTGAGCATGAGCATTTTCACAGGAGAGAGAAACCTTTT < 41bp 0.555490754062872 0.809244336499233 0.1676876 0.15382174 prediction 0.507507164872723 Functional Gain - ZNF146 ENSG00000167635 CDS Human protein_coding chr19:36727454 chr19:36727458 nonsynonymous SNV 0.970 1 25 hm5C_associated_SNPs_107595 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36726516-36728221
64251 chr16 2134519 2134519 1 + C G KIRC 2134515 + 2134495 2134535 41 CGGGGAAAGTGCTGCCTGGTCGGCCTCGGGCGAAGACAGTC CGGGGAAAGTGCTGCCTGGTCGGCGTCGGGCGAAGACAGTC < 41bp 0.579696375124526 0.833358782174164 0.29294127 0.88961875 prediction 0.507324814099275 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2134515 chr16:2134519 synonymous SNV . 0 25 hm5C_associated_SNPs_107605 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2134500-2134531
64251 chr12 109522791 109522791 1 + T A SARC 109522787 + 109522767 109522807 41 AGCCAGGGGCCCCCAAAACACAGATTTTTATGAATGGCGCC AGCCAGGGGCCCCCAAAACACAGAATTTTATGAATGGCGCC < 41bp 0.605988301550073 0.859633535913353 0.4962529 0.32666934 prediction 0.50729046872656 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109522787 chr12:109522791 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_107607 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109522775-109522798
64251 chr2 219269089 219269089 1 + C G rs199987970 219269085 + 219269065 219269105 41 CACGACCTCCTCCCCTTCTTCGAGCAACTCAGCCGTGTGGA CACGACCTCCTCCCCTTCTTCGAGGAACTCAGCCGTGTGGA < 41bp 0.470690628105462 0.753637847318907 0.8633382 0.9285774 prediction 0.507275694637814 Functional Gain - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219269085 chr2:219269089 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_107608 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:219269056-219269089
64251 chr9 117038046 117038046 1 + C G rs143724625 117038045 + 117038025 117038065 41 CCCCCTGGCGTCACTGGTGTCCGGGTGAGTGTGCAGGCCCC CCCCCTGGCGTCACTGGTGTCGGGGTGAGTGTGCAGGCCCC < 41bp 0.574049636597618 0.827679166766675 0.90967417 0.9309793 prediction 0.507259060338112 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117038045 chr9:117038046 nonsynonymous SNV 0.989 0 22 hm5C_associated_SNPs_107610 0 0 10 BUD13 POSTAR2 ENCODE chr9:117038030-117038048
64251 chr9 37503332 37503332 1 + T G rs187119512 37503329 + 37503309 37503349 41 TCACACCTGAAATCCCAGCACTTTGGGAGGCCGAGGCAGGA TCACACCTGAAATCCCAGCACTTGGGGAGGCCGAGGCAGGA < 41bp 0.373877130915026 0.753615051161656 0.7626559 0.7518164 prediction 0.507230102323311 Functional Gain - POLR1E ENSG00000137054 UTR3 Human protein_coding chr9:37503329 chr9:37503332 . . 0 24 hm5C_associated_SNPs_107612 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr9:37503326-37503358
64251 chr9 138395863 138395863 1 + C G LGG 138395859 + 138395839 138395879 41 AGGCTCTTCCAGACGGCCATCACCCGGGCCAAGGAGAAGCG AGGCTCTTCCAGACGGCCATCACCGGGGCCAAGGAGAAGCG < 41bp 0.547011818544271 0.800623643539576 0.25778574 0.40825623 prediction 0.507223649990609 Functional Gain - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395859 chr9:138395863 nonsynonymous SNV 0.193 4 25 hm5C_associated_SNPs_107615 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:138395826-138395863
64251 chr2 27730568 27730568 1 + C T HNSC 27730567 + 27730547 27730587 41 GGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTT GGGTCCCCAGTTCACCTTCTCTCAGGAGGACTTCCTGACTT < 41bp 0.500122532879803 0.753721802299318 0.10562989 0.04501432 prediction 0.50719853883903 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27730567 chr2:27730568 synonymous SNV . 0 22 hm5C_associated_SNPs_107620 0 0 2 U2AF1 POSTAR2 ENCODE chr2:27730532-27730582
64251 chr13 48807588 48807588 1 + C A rs150336652 48807584 + 48807564 48807604 41 GCGAGGAGGCGCTCATCATCCCCCCCGACGCCGTCGCGGTG GCGAGGAGGCGCTCATCATCCCCCACGACGCCGTCGCGGTG < 41bp 0.665025569699507 0.918618028072081 0.063584715 0.05923882 prediction 0.507184916745148 Functional Gain - ITM2B ENSG00000136156 CDS Human protein_coding chr13:48807584 chr13:48807588 nonsynonymous SNV 0.975 0 25 hm5C_associated_SNPs_107621 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:48807554-48807590
64251 chr3 47374728 47374728 1 + C T LAML 47374727 + 47374707 47374747 41 CCTGAGCTGCTGTCCAATATCCGCCTGCCCCTCTGTCGGCC CCTGAGCTGCTGTCCAATATCTGCCTGCCCCTCTGTCGGCC < 41bp 0.520315887543769 0.773901976656938 0.5003243 0.19679826 prediction 0.507172178226337 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47374727 chr3:47374728 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_107624 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:47374718-47374740
64251 chr14 75200809 75200809 1 + C A SKCM 75200808 + 75200788 75200828 41 TACATTGTGGCCACAGTTGACCGGGACCTGAAAAGAAGAAT TACATTGTGGCCACAGTTGACAGGGACCTGAAAAGAAGAAT < 41bp 0.500139515092059 0.753720843724056 0.42958438 0.780097 prediction 0.507162657263995 Functional Gain - FCF1 ENSG00000119616 CDS Human protein_coding chr14:75200808 chr14:75200809 synonymous SNV . 0 22 hm5C_associated_SNPs_107625 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:75200782-75200831
64251 chr5 157181082 157181082 1 + T G PRAD 157181079 + 157181059 157181099 41 AGCATATGAACGGGATTCTTCACTGACTCTCACTAGGGTAG AGCATATGAACGGGATTCTTCACGGACTCTCACTAGGGTAG < 41bp 0.354963210016323 0.753576471196267 0.10095003 0.42616907 prediction 0.507152942392534 Functional Gain - LSM11 ENSG00000155858 CDS Human protein_coding chr5:157181079 chr5:157181082 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_107626 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:157181066-157181087
64251 chr11 82880514 82880514 1 + C G LUSC 82880510 + 82880490 82880530 41 GGTTTGATGGGCAGCCAGGTCAGCCGTCACTCTTGCCAAGA GGTTTGATGGGCAGCCAGGTCAGCGGTCACTCTTGCCAAGA < 41bp 0.552373310396908 0.805949206374527 0.5815646 0.813173 prediction 0.507151791955238 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82880510 chr11:82880514 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_107628 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:82880466-82880529
64251 chr1 26607289 26607289 1 + C A PAAD 26607288 + 26607268 26607308 41 CAGAGCGAGGTGACCCGAATCCTGGATGGGAAGCGCATCCA CAGAGCGAGGTGACCCGAATCATGGATGGGAAGCGCATCCA < 41bp 0.498554547545853 0.753548566641759 0.3417177 0.65394497 prediction 0.507097133283518 Functional Gain - SH3BGRL3 ENSG00000142669 CDS Human protein_coding chr1:26607288 chr1:26607289 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_107633 0 0 5 DDX3X POSTAR2 ENCODE chr1:26607255-26607305
64251 chr1 11333542 11333542 1 + T G rs72856992 11333539 + 11333519 11333559 41 CTTCCTCCTTCCCGGGCGGTCACTGTGCGTGGCTCACTTTT CTTCCTCCTTCCCGGGCGGTCACGGTGCGTGGCTCACTTTT < 41bp 0.466556930912652 0.753530768488815 0.10683814 0.6845044 prediction 0.507061536977631 Functional Gain - UBIAD1 ENSG00000120942 UTR5 Human protein_coding chr1:11333539 chr1:11333542 . . 0 24 hm5C_associated_SNPs_107636 1 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:11333511-11333543
64251 chr16 732411 732411 1 - A C GBM 732414 - 732394 732434 41 ATAGCCAAGTTGGGGATGAGCTGTTCCTGGGTCAGGGGGCT ATAGCCAAGTTGGGGATGAGCTGGTCCTGGGTCAGGGGGCT < 41bp 0.364777565391735 0.753529070350536 0.3166505 0.34620184 prediction 0.507058140701071 Functional Gain - STUB1 ENSG00000103266 CDS Human protein_coding chr16:732414 chr16:732411 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_107637 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:732350-732411
64251 chr19 17449927 17449927 1 + C G HNSC 17449926 + 17449906 17449946 41 CTCTGCCTGCCTTCTCTCACCCACAGCCGACATCGAAGTAC CTCTGCCTGCCTTCTCTCACCGACAGCCGACATCGAAGTAC < 41bp 0.43894697444945 0.753521348888322 0.032588214 0.16977948 prediction 0.507042697776643 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17449926 chr19:17449927 synonymous SNV . 0 22 hm5C_associated_SNPs_107639 0 0 20 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17449900-17449931
64251 chr3 10102063 10102063 1 + T C LIHC 10102061 + 10102041 10102081 41 GGGATTATTGGTGCTGTGACCATGGCTGGCATCATGGCGGC GGGATTATTGGTGCTGTGACCACGGCTGGCATCATGGCGGC < 41bp 0.540095072667426 0.79359387487835 0.69337034 0.82260877 prediction 0.506997604421849 Functional Gain - FANCD2 ENSG00000144554 CDS Human protein_coding chr3:10102061 chr3:10102063 nonsynonymous SNV 0.994 3 23 hm5C_associated_SNPs_107643 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10102004-10102078
64251 chr1 245006620 245006620 1 - G C rs189065914 245006624 - 245006604 245006644 41 AGACACAGGGCCAGAATAAACTGGCAAGTTTTCATTCCACA AGACACAGGGCCAGAATAAACTGGGAAGTTTTCATTCCACA < 41bp 0.536717837072625 0.790196721711516 0.21214217 0.4291994 prediction 0.506957769277782 Functional Gain - COX20 ENSG00000188206 ncRNA_exonic Human other chr1:245006624 chr1:245006620 . . 0 25 hm5C_associated_SNPs_107649 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:245006551-245006624
64251 chr16 24046832 24046832 1 + C G rs199648786 24046831 + 24046811 24046851 41 CGCCGCGGCCGCATCTACATCCAGGCCCACATCGACAGGGA CGCCGCGGCCGCATCTACATCGAGGCCCACATCGACAGGGA < 41bp 0.449720545552194 0.753465224575645 0.448929 0.91691315 prediction 0.50693044915129 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24046831 chr16:24046832 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_107650 0 0 5 DDX24 POSTAR2 ENCODE chr16:24046801-24046867
64251 chr11 118277757 118277757 1 + T C LIHC 118277755 + 118277735 118277775 41 ATCCCTAGAGCTATTCAGAGCCTGAAAAAAATAGTCAATAG ATCCCTAGAGCTATTCAGAGCCCGAAAAAAATAGTCAATAG < 41bp 0.531689658825758 0.785153610188366 0.10356775 0.15190518 prediction 0.506927902725216 Functional Gain - ATP5L ENSG00000167283 CDS Human protein_coding chr11:118277755 chr11:118277757 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_107651 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:118277696-118277760
64251 chr21 47706297 47706297 1 + C A rs2298699 47706293 + 47706273 47706313 41 GGCTTCCGGTCGGGAGGGTCCGCCCGCTCTCGCGTCCTTTG GGCTTCCGGTCGGGAGGGTCCGCCAGCTCTCGCGTCCTTTG < 41bp 0.639527634261497 0.892980968128196 0.26264238 0.71091783 prediction 0.506906667733397 Functional Gain - YBEY ENSG00000182362 UTR5 Human protein_coding chr21:47706293 chr21:47706297 . . 0 25 hm5C_associated_SNPs_107652 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr21:47706280-47706300
64251 chr5 122425877 122425877 1 + C G rs537520863 122425873 + 122425853 122425893 41 GCCTCTTCAGCCGCCGCCGCCGCCCCCGCCCCCGGAGCGCG GCCTCTTCAGCCGCCGCCGCCGCCGCCGCCCCCGGAGCGCG < 41bp 0.555295276010109 0.808728971067004 0.33444667 0.42219266 prediction 0.50686739011379 Functional Gain - PRDM6 ENSG00000061455 CDS Human protein_coding chr5:122425873 chr5:122425877 synonymous SNV . 0 25 hm5C_associated_SNPs_107654 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:122425876-122425877
64251 chr2 71591136 71591136 1 + C T SKCM 71591135 + 71591115 71591155 41 CCACGAAGACGTTCTCATTCCCCCAGTCCTAGGCGTTCTAG CCACGAAGACGTTCTCATTCCTCCAGTCCTAGGCGTTCTAG < 41bp 0.511562675502413 0.76497912449415 0.14975688 0.93489635 prediction 0.506832897983473 Functional Gain - ZNF638 ENSG00000075292 CDS Human protein_coding chr2:71591135 chr2:71591136 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_107659 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:71591095-71591195
64251 chr15 41774564 41774564 1 + C G rs192490973 41774563 + 41774543 41774583 41 ACAGCTGAGAGCTCCGATCTCCACGAGAGACTAATCTAAAA ACAGCTGAGAGCTCCGATCTCGACGAGAGACTAATCTAAAA < 41bp 0.481652859365415 0.753414486197538 0.7457005 0.8957588 prediction 0.506828972395076 Functional Gain - RTF1 ENSG00000137815 UTR3 Human protein_coding chr15:41774563 chr15:41774564 . . 0 22 hm5C_associated_SNPs_107662 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41774519-41774573
64251 chr16 70497604 70497604 1 + T A HNSC 70497600 + 70497580 70497620 41 CCGTGGAGGACCCAGAGAAGCGTGTGGGCAGCGGAGGAGCC CCGTGGAGGACCCAGAGAAGCGTGAGGGCAGCGGAGGAGCC < 41bp 0.445582734607489 0.753407825365856 0.3913834 0.49638203 prediction 0.506815650731712 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70497600 chr16:70497604 nonsynonymous SNV 0.785 4 25 hm5C_associated_SNPs_107664 0 0 2 BUD13 POSTAR2 ENCODE chr16:70497594-70497646
64251 chr7 66415947 66415947 1 + C T COAD 66415946 + 66415926 66415966 41 TCTTCTCCTGCAGACAGCCACCGCACTGTGTTCCTGACACG TCTTCTCCTGCAGACAGCCACTGCACTGTGTTCCTGACACG < 41bp 0.504877200855131 0.758276234819376 0.08570266 0.17921144 prediction 0.50679806792849 Functional Gain - TMEM248 ENSG00000106609 CDS Human protein_coding chr7:66415946 chr7:66415947 nonsynonymous SNV 0.915 1 22 hm5C_associated_SNPs_107667 0 0 5 GRWD1 POSTAR2 ENCODE chr7:66415939-66416047
64251 chr16 28847336 28847336 1 + C G COAD 28847332 + 28847312 28847352 41 CGCCCCAGGTGATGCTGCTGCACCCACCCCAGAGTCATGGG CGCCCCAGGTGATGCTGCTGCACCGACCCCAGAGTCATGGG < 41bp 0.52678535980436 0.780178682009484 0.10673219 0.1251617 prediction 0.506786644410248 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847332 chr16:28847336 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_107669 0 0 2 DDX59 POSTAR2 ENCODE chr16:28847323-28847385
64251 chr3 127325478 127325478 1 + C A KIRC 127325477 + 127325457 127325497 41 CTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGAC CTGCATCTGAACCAGCTGATCAGCACCAGTGGGGTGGTGAC < 41bp 0.507564210971191 0.760944476486393 0.36490038 0.8627258 prediction 0.506760531030404 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325477 chr3:127325478 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_107670 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:127325462-127325486
64251 chr19 19655201 19655201 1 + C A LIHC 19655197 + 19655177 19655217 41 CGTTCGTGGACCCCCGAGACCTCACCTCGGCGGCGTCTGCC CGTTCGTGGACCCCCGAGACCTCAACTCGGCGGCGTCTGCC < 41bp 0.32949780619063 0.753364474837023 0.38061756 0.3609389 prediction 0.506728949674047 Functional Gain - CILP2 ENSG00000160161 CDS Human protein_coding chr19:19655197 chr19:19655201 nonsynonymous SNV 0.065 1 25 hm5C_associated_SNPs_107672 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:19655194-19655215
64251 chr20 48504682 48504682 1 + C G rs185204675 48504678 + 48504658 48504698 41 ACTTCTTGGGAAACTGTCATCTCCCGACTCCTCCCTGAGCC ACTTCTTGGGAAACTGTCATCTCCGGACTCCTCCCTGAGCC < 41bp 0.458602795655923 0.753363471278134 0.21688169 0.8115267 prediction 0.506726942556267 Functional Gain - SLC9A8 ENSG00000197818 UTR3 Human protein_coding chr20:48504678 chr20:48504682 . . 0 25 hm5C_associated_SNPs_107673 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:48504650-48504693
64251 chr13 77566320 77566320 1 + C G rs138037471 77566319 + 77566299 77566339 41 ACGCGCTTCCTGGTGCTGGGCCCTGGCGCTGCTTTGGCTCG ACGCGCTTCCTGGTGCTGGGCGCTGGCGCTGCTTTGGCTCG < 41bp 0.461681948787391 0.753337184162327 0.2196314 0.3342575 prediction 0.506674368324654 Functional Gain - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77566319 chr13:77566320 synonymous SNV . 0 22 hm5C_associated_SNPs_107676 3 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chr13:77566301-77566331
64251 chr6 26205013 26205013 1 + T G UCEC 26205010 + 26204990 26205030 41 CGTCGCGGGGGTGTCAAGCGCATTTCTGGTCTCATCTACGA CGTCGCGGGGGTGTCAAGCGCATGTCTGGTCTCATCTACGA < 41bp 0.364917696555944 0.753333448876006 0.44699907 0.44655937 prediction 0.506666897752011 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26205010 chr6:26205013 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_107678 0 0 41 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26204840-26205100
64251 chr19 1036456 1036456 1 + C G rs1064410 1036452 + 1036432 1036472 41 CGCCAGCCAGTCGGGCATGACTGCCTACGGCACGAGAAGGC CGCCAGCCAGTCGGGCATGACTGCGTACGGCACGAGAAGGC < 41bp 0.476392418232304 0.753302838467531 0.28984258 0.4366116 prediction 0.506605676935063 Functional Gain - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1036452 chr19:1036456 synonymous SNV . 0 25 hm5C_associated_SNPs_107682 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:1036442-1036457
64251 chr11 209797 209797 1 + C T UCEC 209796 + 209776 209816 41 CTCTTCCTGCTAACGGCACTCCGCACCGATGTGCGCCAGCA CTCTTCCTGCTAACGGCACTCTGCACCGATGTGCGCCAGCA < 41bp 0.518997204623386 0.772299500659367 0.13041043 0.29827785 prediction 0.506604592071961 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209796 chr11:209797 nonsynonymous SNV 0.554 3 22 hm5C_associated_SNPs_107683 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:209757-209797
64251 chr4 7774715 7774715 1 + C A BLCA 7774714 + 7774694 7774734 41 CAGCTGCTTCAGCTTCTCCTCCAGGATCGCCTGCGGCTTCC CAGCTGCTTCAGCTTCTCCTCAAGGATCGCCTGCGGCTTCC < 41bp 0.499149405219726 0.753293695839211 0.45836002 0.52397126 prediction 0.506587391678422 Functional Gain - AFAP1 ENSG00000196526 CDS Human protein_coding chr4:7774714 chr4:7774715 synonymous SNV . 0 22 hm5C_associated_SNPs_107688 0 0 2 IGF2BP2 POSTAR2 ENCODE chr4:7774643-7774730
64251 chr20 39729898 39729898 1 + C A SKCM 39729897 + 39729877 39729917 41 GGACATAAGTGGAAAGAAGTCCGGCATGATAACAAGGTTAC GGACATAAGTGGAAAGAAGTCAGGCATGATAACAAGGTTAC < 41bp 0.498519386624208 0.753282701541586 0.41198036 0.50685 prediction 0.506565403083171 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39729897 chr20:39729898 synonymous SNV . 0 22 hm5C_associated_SNPs_107692 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:39729859-39729912
64251 chr16 1705975 1705975 1 + T G UCEC 1705972 + 1705952 1705992 41 GTTCCCAGGCGAGAACTGTACACTGACACCGCTGCCGGGCG GTTCCCAGGCGAGAACTGTACACGGACACCGCTGCCGGGCG < 41bp 0.349266645900057 0.753261126021303 0.37464452 0.71490026 prediction 0.506522252042606 Functional Gain - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1705972 chr16:1705975 nonsynonymous SNV 0.853 3 24 hm5C_associated_SNPs_107695 0 0 4 DDX3X POSTAR2 ENCODE chr16:1705967-1706016
64251 chr16 69184590 69184590 1 + C A UCEC 69184589 + 69184569 69184609 41 GTGCGCACTGTGGCCCACAGCCCAACAGCGCTGATATCTGG GTGCGCACTGTGGCCCACAGCACAACAGCGCTGATATCTGG < 41bp 0.51545742298578 0.768718040522082 0.07573584 0.11341554 prediction 0.506521235072603 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184589 chr16:69184590 nonsynonymous SNV 0.817 0 22 hm5C_associated_SNPs_107696 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:69184564-69184601
64251 chr7 157172597 157172597 1 + C G rs9297108 157172596 + 157172576 157172616 41 GCTCACTGTATCCTCCACCTCCGGGGTTCAAGCAATTTTCG GCTCACTGTATCCTCCACCTCGGGGGTTCAAGCAATTTTCG < 41bp 0.460376622586136 0.753259766944881 0.8960862 0.9260645 prediction 0.506519533889762 Functional Gain - DNAJB6 ENSG00000105993 intronic Human protein_coding chr7:157172596 chr7:157172597 . . 0 22 hm5C_associated_SNPs_107697 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:157172571-157172603
64251 chr5 43628327 43628327 1 + T A LUSC 43628323 + 43628303 43628343 41 GCTGCAGCTTTGGAACAGTTCAAGTCTCTTGGTGCTGAGCC GCTGCAGCTTTGGAACAGTTCAAGACTCTTGGTGCTGAGCC < 41bp 0.429744420792076 0.75324949150292 0.40888435 0.6484639 prediction 0.506498983005841 Functional Gain - NNT ENSG00000112992 CDS Human protein_coding chr5:43628323 chr5:43628327 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_107699 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:43628315-43628351
64251 chr16 31765100 31765100 1 + T C LIHC 31765098 + 31765078 31765118 41 ATCTTTCAGATATCTTTTCTCATGATACTCAAGGCCTCTTA ATCTTTCAGATATCTTTTCTCACGATACTCAAGGCCTCTTA < 41bp 0.5093919488569 0.76263872859849 0.35150948 0.2709049 prediction 0.50649355948318 Functional Gain - ZNF720 ENSG00000197302 CDS Human protein_coding chr16:31765098 chr16:31765100 synonymous SNV . 0 23 hm5C_associated_SNPs_107701 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:31765086-31765120
64251 chr8 106456593 106456593 1 + C A LUAD 106456589 + 106456569 106456609 41 GGGGCAACCTGGAGTTGAGACAGACGACTGGGATGGACCAG GGGGCAACCTGGAGTTGAGACAGAAGACTGGGATGGACCAG < 41bp 0.371972472816563 0.753239400454927 0.729598 0.7707784 prediction 0.506478800909854 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106456589 chr8:106456593 nonsynonymous SNV 0.816 0 25 hm5C_associated_SNPs_107703 0 0 4 DGCR8 POSTAR2 ENCODE chr8:106456570-106456610
64251 chr15 45879699 45879699 1 + C A UCEC 45879695 + 45879675 45879715 41 GCCCTGACACGGCCACCCTACTGCCTGGAGGCCGGGGAGCC GCCCTGACACGGCCACCCTACTGCATGGAGGCCGGGGAGCC < 41bp 0.65983935390312 0.913074109218963 0.23323682 0.36366868 prediction 0.506469510631686 Functional Gain - BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45879695 chr15:45879699 nonsynonymous SNV 0.053 1 25 hm5C_associated_SNPs_107705 0 0 4 DDX3X POSTAR2 ENCODE chr15:45879651-45879723
64251 chr22 44322843 44322843 1 + T C rs147412464 44322841 + 44322821 44322861 41 CTCTGCAGGTCCTCTCAGATCTTGTGCGGAAGGCCAGGAGT CTCTGCAGGTCCTCTCAGATCTCGTGCGGAAGGCCAGGAGT < 41bp 0.526230702105507 0.779439872741746 0.46765822 0.7275839 prediction 0.506418341272477 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44322841 chr22:44322843 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_107713 1 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:44322836-44322867
64251 chr12 96255061 96255061 1 + T C UCEC 96255059 + 96255039 96255079 41 CTGGTATCTGTAGATGGCTACATGAACATGCAGGTAAGCTA CTGGTATCTGTAGATGGCTACACGAACATGCAGGTAAGCTA < 41bp 0.555457255362936 0.808646105274842 0.2981305 0.111097425 prediction 0.506377699823811 Functional Gain - SNRPF ENSG00000139343 CDS Human protein_coding chr12:96255059 chr12:96255061 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_107718 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:96255024-96255062
64251 chr11 70200478 70200478 1 + C T HNSC 70200477 + 70200457 70200497 41 TGAAACCTCCCCGCCTTCCTCCCCGAGAGCCCTTCGGTTAG TGAAACCTCCCCGCCTTCCTCTCCGAGAGCCCTTCGGTTAG < 41bp 0.517411423297265 0.770597963724372 0.30295506 0.86570156 prediction 0.506373080854213 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70200477 chr11:70200478 synonymous SNV . 0 22 hm5C_associated_SNPs_107720 0 0 4 FMR1 POSTAR2 ENCODE chr11:70200453-70200511
64251 chr3 9711141 9711141 1 + T A rs189614064 9711137 + 9711117 9711157 41 GGGTGCAGATGATGCCTGGGCAGATGTGGAGGACGTCACGG GGGTGCAGATGATGCCTGGGCAGAAGTGGAGGACGTCACGG < 41bp 0.594817838173022 0.848000900197622 0.8852225 0.7935111 prediction 0.506366124049201 Functional Gain - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9711137 chr3:9711141 nonsynonymous SNV 0.575 0 25 hm5C_associated_SNPs_107721 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:9711122-9711150
64251 chr15 76629156 76629156 1 + C G rs548934477 76629155 + 76629135 76629175 41 AGGAGTTAGTTAGCAAAGAGCCGAGGCCGGGCGCGCGACCC AGGAGTTAGTTAGCAAAGAGCGGAGGCCGGGCGCGCGACCC < 41bp 0.583343157513133 0.836505799829488 0.6816536 0.89762723 prediction 0.506325284632711 Functional Gain - ISL2 ENSG00000159556 UTR5 Human protein_coding chr15:76629155 chr15:76629156 . . 0 22 hm5C_associated_SNPs_107725 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:76629131-76629166
64251 chr1 117618146 117618146 1 + C G ACC 117618145 + 117618125 117618165 41 AGCCTGCCTCAGGGGCATTTCCAAGAGCGGCCGGAGACCCA AGCCTGCCTCAGGGGCATTTCGAAGAGCGGCCGGAGACCCA < 41bp 0.445806916058223 0.753146584705266 0.91311955 0.91265684 prediction 0.506293169410533 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117618145 chr1:117618146 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_107730 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:117618122-117618166
64251 chr11 7669667 7669667 1 + T C KIRP 7669665 + 7669645 7669685 41 GAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCC GAGCACAGAGCGTGTGTGTGCACGGCTGGAGGACTTTGGCC < 41bp 0.523659112328418 0.776791678515375 0.32120195 0.32523018 prediction 0.506265132373913 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7669665 chr11:7669667 nonsynonymous SNV 0.737 4 23 hm5C_associated_SNPs_107733 0 0 1 PPIG POSTAR2 ENCODE chr11:7669623-7669690
64251 chr12 69140053 69140053 1 + C A rs115175079 69140049 + 69140029 69140069 41 TGTGCATGCCACTCCTGGGTCAGACGGTGAGGTCGGCGTCT TGTGCATGCCACTCCTGGGTCAGAAGGTGAGGTCGGCGTCT < 41bp 0.456201969245646 0.753112928763448 0.73810035 0.8211862 prediction 0.506225857526895 Functional Gain - SLC35E3 ENSG00000175782 UTR5 Human protein_coding chr12:69140049 chr12:69140053 . . 0 25 hm5C_associated_SNPs_107738 0 0 4 DDX3X POSTAR2 ENCODE chr12:69139955-69140074
64251 chr17 39845139 39845139 1 + C G rs563193891 39845135 + 39845115 39845155 41 TAAACACAGGCACCGCCCCTCTGCCCCAGTCACTGAGCCGC TAAACACAGGCACCGCCCCTCTGCGCCAGTCACTGAGCCGC < 41bp 0.528013393958612 0.781121666726546 0.16056934 0.20790514 prediction 0.506216545535869 Functional Gain - EIF1 ENSG00000173812 UTR5 Human protein_coding chr17:39845135 chr17:39845139 . . 0 25 hm5C_associated_SNPs_107739 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:39845120-39845140
64251 chr6 43127577 43127577 1 + C A rs55921533 43127573 + 43127553 43127593 41 GGTGCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGG GGTGCCGCTGCGCTGGATGTCCCCAGAGGCCATCCTGGAGG < 41bp 0.334314370654201 0.753096169356422 0.1438357 0.43647283 prediction 0.506192338712845 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43127573 chr6:43127577 synonymous SNV . 0 25 hm5C_associated_SNPs_107744 0 0 1 SND1 POSTAR2 ENCODE chr6:43127534-43127600
64251 chr10 27444284 27444284 1 + T G rs531122141 27444282 + 27444262 27444302 41 GCGGCGTGGGCGGAGCCTCACTTTGAACCCAGTTGGCGGGA GCGGCGTGGGCGGAGCCTCACTGTGAACCCAGTTGGCGGGA < 41bp 0.534399684765221 0.78749413501114 0.029722333 0.069505244 prediction 0.506188900491839 Functional Gain - MASTL ENSG00000120539 UTR5 Human protein_coding chr10:27444282 chr10:27444284 . . 0 23 hm5C_associated_SNPs_107745 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr10:27444284-27444285
64251 chr5 54461579 54461579 1 + T A rs138949806 54461575 + 54461555 54461595 41 AGATGAGTGTGTCAGAAAGCCTGCTCCTACCTCTCGCCAGC AGATGAGTGTGTCAGAAAGCCTGCACCTACCTCTCGCCAGC < 41bp 0.576240618785223 0.829331460844833 0.08156997 0.0893417 prediction 0.506181684119221 Functional Gain - GPX8 ENSG00000164294 UTR3 Human protein_coding chr5:54461575 chr5:54461579 . . 0 25 hm5C_associated_SNPs_107746 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:54461571-54461601
64251 chr6 147648354 147648354 1 + T G COAD 147648351 + 147648331 147648371 41 GGCACTATTGAATTATATGGCTCTAATGATCCTTATCGGAG GGCACTATTGAATTATATGGCTCGAATGATCCTTATCGGAG < 41bp 0.395695883710359 0.753085341998832 0.30672774 0.03254676 prediction 0.506170683997665 Functional Gain - STXBP5 ENSG00000164506 CDS Human protein_coding chr6:147648351 chr6:147648354 synonymous SNV . 0 24 hm5C_associated_SNPs_107748 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:147648340-147648360
64251 chr19 10908073 10908073 1 + C G TGCT 10908072 + 10908052 10908092 41 CCAGGACGGGGCTCTTCACCCCCGACATGGCCTTTGAAGCC CCAGGACGGGGCTCTTCACCCGCGACATGGCCTTTGAAGCC < 41bp 0.45126167189333 0.753083450165924 0.019321918 0.57913905 prediction 0.506166900331847 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10908072 chr19:10908073 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_107750 0 0 10 DDX6 POSTAR2 ENCODE chr19:10907994-10908084
64251 chr16 72110738 72110738 1 + C G LUAD 72110737 + 72110717 72110757 41 AAATGGAAGGCACCGAAGAGCCCTGTAGGGGTGCAGCCCAT AAATGGAAGGCACCGAAGAGCGCTGTAGGGGTGCAGCCCAT < 41bp 0.43510720178898 0.753067897356582 0.053078413 0.14008412 prediction 0.506135794713164 Functional Gain - HPR ENSG00000261701 CDS Human protein_coding chr16:72110737 chr16:72110738 nonsynonymous SNV 0.051 3 22 hm5C_associated_SNPs_107753 0 0 2 SND1 POSTAR2 ENCODE chr16:72110704-72110775
64251 chr4 184431707 184431707 1 + T C COAD 184431705 + 184431685 184431725 41 TTCCAGCCAACCAGAAAGATCTTCAAGAAGACCCCGCAGGC TTCCAGCCAACCAGAAAGATCTCCAAGAAGACCCCGCAGGC < 41bp 0.567531968108233 0.820548171931069 0.053411186 0.9489715 prediction 0.506032407645673 Functional Gain - ING2 ENSG00000168556 CDS Human protein_coding chr4:184431705 chr4:184431707 nonsynonymous SNV 0.996 0 23 hm5C_associated_SNPs_107759 0 0 2 ZNF622 POSTAR2 ENCODE chr4:184431657-184431722
64251 chr14 55241680 55241680 1 + C T UCEC 55241679 + 55241659 55241699 41 TTTGGGCAATCCAACTCCCTCCCGACGGCTGGCTCTGTGGG TTTGGGCAATCCAACTCCCTCTCGACGGCTGGCTCTGTGGG < 41bp 0.486837549461902 0.753010456931416 0.11230108 0.35475957 prediction 0.506020913862832 Functional Gain - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55241679 chr14:55241680 nonsynonymous SNV 0.891 4 22 hm5C_associated_SNPs_107761 0 0 1 U2AF2 POSTAR2 ENCODE chr14:55241637-55241684
64251 chr19 4409533 4409533 1 + T G BLCA 4409531 + 4409511 4409551 41 ATGGTGGTCTTGCAGGACATCTTGGCTGTGAGACCACCGCA ATGGTGGTCTTGCAGGACATCTGGGCTGTGAGACCACCGCA < 41bp 0.632188641985209 0.885149262566217 0.061466694 0.8652793 prediction 0.505921241162017 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409531 chr19:4409533 nonsynonymous SNV 0.398 3 23 hm5C_associated_SNPs_107772 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:4409403-4409554
64251 chr6 7390077 7390077 1 + C G rs6597266 7390073 + 7390053 7390093 41 GGGGTGGCAGGGTGGTGGATCTGTCGGTCCCGTTTTCCCGT GGGGTGGCAGGGTGGTGGATCTGTGGGTCCCGTTTTCCCGT < 41bp 0.557788389697562 0.810742362723936 0.20599797 0.17874846 prediction 0.505907946052748 Functional Gain - RIOK1 ENSG00000124784 UTR5 Human protein_coding chr6:7390073 chr6:7390077 . . 0 25 hm5C_associated_SNPs_107773 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:7390060-7390080
64251 chr19 57168201 57168201 1 + T A rs372528474 57168197 + 57168177 57168217 41 ACACAGAATGTGGCCTATAACACATCTGCTTCCAAAACTTT ACACAGAATGTGGCCTATAACACAACTGCTTCCAAAACTTT < 41bp 0.496654917035951 0.752938862728416 0.11071339 0.094956666 prediction 0.505877725456833 Functional Gain - SMIM17 ENSG00000268182;ENSG00000127903 intergenic Human other chr19:57168197 chr19:57168201 . . 0 25 hm5C_associated_SNPs_107778 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:57168178-57168211
64251 chrX 48545194 48545194 1 + T G GBM 48545192 + 48545172 48545212 41 CCTCCAGTGGGTCCGCTCTCCCTGGGGCTGGCGACAGTGGA CCTCCAGTGGGTCCGCTCTCCCGGGGGCTGGCGACAGTGGA < 41bp 0.387009633801279 0.752920465188355 0.27824804 0.94417065 prediction 0.505840930376711 Functional Gain - WAS ENSG00000015285 CDS Human protein_coding chrX:48545192 chrX:48545194 nonsynonymous SNV 0.623 3 23 hm5C_associated_SNPs_107779 0 0 1 RPS3 POSTAR2 ENCODE chrX:48545169-48545228
64251 chr1 27158956 27158956 1 + C A rs190999121 27158952 + 27158932 27158972 41 TTCTAGCTGTCCCTACCTGGCTCGCAAGCTGACCCTTGCCA TTCTAGCTGTCCCTACCTGGCTCGAAAGCTGACCCTTGCCA < 41bp 0.326001836180378 0.752920242272849 0.041399002 0.14431876 prediction 0.505840484545698 Functional Gain - ZDHHC18 ENSG00000204160 CDS Human protein_coding chr1:27158952 chr1:27158956 synonymous SNV . 0 25 hm5C_associated_SNPs_107780 0 0 1 ZNF622 POSTAR2 ENCODE chr1:27158940-27159127
64251 chr12 71898435 71898435 1 + C T SKCM 71898434 + 71898414 71898454 41 TCAGTCAGCTGCTCCCGAATCCCCTGCCCAGTCTCCGCTTC TCAGTCAGCTGCTCCCGAATCTCCTGCCCAGTCTCCGCTTC < 41bp 0.505362471694633 0.758270133901419 0.093535185 0.108474046 prediction 0.505815324413571 Functional Gain - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71898434 chr12:71898435 nonsynonymous SNV 0.064 0 22 hm5C_associated_SNPs_107782 0 0 2 PPIG POSTAR2 ENCODE chr12:71898400-71898466
64251 chr9 110081110 110081110 1 + C A UCEC 110081109 + 110081089 110081129 41 CGAGAGCAAGTAATTGCAGCCCTGAGAGCCAGTTTCAACAA CGAGAGCAAGTAATTGCAGCCATGAGAGCCAGTTTCAACAA < 41bp 0.49701786217255 0.752901848017247 0.02123189 0.20414817 prediction 0.505803696034495 Functional Gain - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110081109 chr9:110081110 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_107783 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:110081032-110081115
64251 chr4 41984484 41984484 1 + T G SKCM 41984481 + 41984461 41984501 41 CAGCAGTCATTTGATACCAGCAGTGATGTCTTGGCCCAGCA CAGCAGTCATTTGATACCAGCAGGGATGTCTTGGCCCAGCA < 41bp 0.363212551813004 0.752879872003173 0.24630815 0.9037865 prediction 0.505759744006346 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984481 chr4:41984484 nonsynonymous SNV 0.327 3 24 hm5C_associated_SNPs_107785 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:41984450-41984486
64251 chr6 170627542 170627542 1 + T C rs572714192 170627540 + 170627520 170627560 41 GAATCCAGGCAAGAAGTTCCCATGTGTACAGGCCCTGAATC GAATCCAGGCAAGAAGTTCCCACGTGTACAGGCCCTGAATC < 41bp 0.50048357540245 0.75332397577522 0.548869 0.7476629 prediction 0.505680800745541 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627540 chr6:170627542 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_107790 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:170627509-170627547
64251 chr11 60689319 60689319 1 + C G ESCA 60689318 + 60689298 60689338 41 CCTGCTGTGGGGAGCAGGGGCCCTGGTCGTCTACTGGCTGC CCTGCTGTGGGGAGCAGGGGCGCTGGTCGTCTACTGGCTGC < 41bp 0.595881542290775 0.84871955060299 0.69888777 0.8660546 prediction 0.505676016624431 Functional Gain - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689318 chr11:60689319 synonymous SNV . 0 22 hm5C_associated_SNPs_107791 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:60689299-60689328
64251 chr7 27194314 27194314 1 + C A rs17472084 27194310 + 27194290 27194330 41 GAGGCAGAGGGAATCCAAGGCGACCCAGTCTCTGCGGCCGC GAGGCAGAGGGAATCCAAGGCGACACAGTCTCTGCGGCCGC < 41bp 0.371596102830528 0.752811317011468 0.11967826 0.14005566 prediction 0.505622634022937 Functional Gain - HOXA-AS3 ENSG00000254369 ncRNA_exonic Human antisense chr7:27194310 chr7:27194314 . . 0 25 hm5C_associated_SNPs_107797 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:27194300-27194323
64251 chr8 38089500 38089500 1 + C G rs151043937 38089499 + 38089479 38089519 41 GGCTCCCGGGAAGCCCCGAGCCTGGGGGAACCCTGGGCACC GGCTCCCGGGAAGCCCCGAGCGTGGGGGAACCCTGGGCACC < 41bp 0.456041916203081 0.752805274979274 0.8981584 0.91836214 prediction 0.505610549958547 Functional Gain - DDHD2 ENSG00000085788 UTR5 Human protein_coding chr8:38089499 chr8:38089500 . . 0 22 hm5C_associated_SNPs_107798 0 0 3 DHX30 POSTAR2 ENCODE chr8:38089464-38089508
64251 chr5 126113479 126113479 1 + C G rs74362780 126113475 + 126113455 126113495 41 GCTGGCCGACGCGCGACGCGCGCTCGACGACACGGCCCGCG GCTGGCCGACGCGCGACGCGCGCTGGACGACACGGCCCGCG < 41bp 0.560657070627468 0.813461994231148 0.0839023 0.14776894 prediction 0.50560984720736 Functional Gain - LMNB1 ENSG00000113368 CDS Human protein_coding chr5:126113475 chr5:126113479 synonymous SNV . 0 25 hm5C_associated_SNPs_107799 0 0 2 RPS3 POSTAR2 ENCODE chr5:126113451-126113491
64251 chr1 45224990 45224990 1 + T C rs139346428 45224988 + 45224968 45225008 41 GTTAACTCTGCTGATGATGTCATCAAGATGATCGACATGGG GTTAACTCTGCTGATGATGTCACCAAGATGATCGACATGGG < 41bp 0.562867585695493 0.815663490437875 0.08492836 0.20112795 prediction 0.505591809484764 Functional Gain - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45224988 chr1:45224990 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_107800 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:45224947-45224994
64251 chr16 58426569 58426569 1 + T G COAD 58426567 + 58426547 58426587 41 GCCTGAGGAGAACTTTCTTTCTTTGGACGACATCCTGATGT GCCTGAGGAGAACTTTCTTTCTGTGGACGACATCCTGATGT < 41bp 0.4139114503375 0.752790026159452 0.28325748 0.37922668 prediction 0.505580052318904 Functional Gain - GINS3 ENSG00000181938 CDS Human protein_coding chr16:58426567 chr16:58426569 nonsynonymous SNV 0.974 3 23 hm5C_associated_SNPs_107802 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:58426541-58426569
64251 chr19 9271969 9271969 1 + C A rs9305035 9271965 + 9271945 9271985 41 GGCTCCAACCTGAATGTGCACAGGCGGATCCACACCGGGGA GGCTCCAACCTGAATGTGCACAGGAGGATCCACACCGGGGA < 41bp 0.660840853139701 0.913589559970577 0.7608452 0.7722664 prediction 0.505497413661753 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271965 chr19:9271969 synonymous SNV . 0 25 hm5C_associated_SNPs_107809 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:9271963-9271987
64251 chr12 27175494 27175494 1 + T A rs3963548 27175490 + 27175470 27175510 41 CGGAAGAGCAGCTGTTTTGGCGTCTGTTTGCTGCGGTAGGA CGGAAGAGCAGCTGTTTTGGCGTCAGTTTGCTGCGGTAGGA < 41bp 0.561065629997615 0.813769186350589 0.33173844 0.3424925 prediction 0.505407112705949 Functional Gain - MED21 ENSG00000152944 UTR5 Human protein_coding chr12:27175490 chr12:27175494 . . 0 25 hm5C_associated_SNPs_107817 0 0 1 DDX3X POSTAR2 ENCODE chr12:27175485-27175555
64251 chr8 91013752 91013752 1 + T G STAD 91013749 + 91013729 91013769 41 ACCGGCCAGGGTTTTCTTTACTCTGGGGTCCCGGCTGCCCT ACCGGCCAGGGTTTTCTTTACTCGGGGGTCCCGGCTGCCCT < 41bp 0.658137813271837 0.910840606054914 0.38741255 0.670138 prediction 0.505405585566154 Functional Gain - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91013749 chr8:91013752 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_107818 0 0 5 DDX3X POSTAR2 ENCODE chr8:91013743-91013789
64251 chr8 145065447 145065447 1 + C A UCEC 145065446 + 145065426 145065466 41 ACAACTATCCTCCCCCCAACCCTGGATATCCGGGGGGGCCC ACAACTATCCTCCCCCCAACCATGGATATCCGGGGGGGCCC < 41bp 0.49930650982916 0.752691381561325 0.2817061 0.24530303 prediction 0.505382763122651 Functional Gain - GRINA ENSG00000178719 CDS Human protein_coding chr8:145065446 chr8:145065447 nonsynonymous SNV 0.748 1 22 hm5C_associated_SNPs_107821 0 0 30 PTBP1 POSTAR2 GSE42701,GSM1048186 chr8:145065440-145065460
64251 chr2 203130554 203130554 1 + T A LUSC 203130550 + 203130530 203130570 41 TCTTTGCGGGACGGCGAGCGCATTTGTGCTTTGCCCGCCGC TCTTTGCGGGACGGCGAGCGCATTAGTGCTTTGCCCGCCGC < 41bp 0.499711759571079 0.752681689944972 0.19518802 0.41495395 prediction 0.505363379889944 Functional Gain - NOP58 ENSG00000055044 UTR5 Human protein_coding chr2:203130550 chr2:203130554 . . 0 25 hm5C_associated_SNPs_107823 0 0 19 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:203130520-203130560
64251 chr20 3785499 3785499 1 + T C BRCA 3785497 + 3785477 3785517 41 GAACCCCAGGACTACCGGCCCATGAACCACGAGGCCTTCAA GAACCCCAGGACTACCGGCCCACGAACCACGAGGCCTTCAA < 41bp 0.522264216002746 0.774941753118341 0.08426899 0.13418987 prediction 0.50535507423119 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3785497 chr20:3785499 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_107824 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr20:3785471-3785504
64251 chr9 103348604 103348604 1 + C G rs546031058 103348600 + 103348580 103348620 41 CAGTGAACCAGAACACGAGGCAGCCAGGCCGGTGTATCCTC CAGTGAACCAGAACACGAGGCAGCGAGGCCGGTGTATCCTC < 41bp 0.574012775047547 0.826689695070592 0.16424134 0.35074052 prediction 0.50535384004609 Functional Gain - CAVIN4 ENSG00000170681 CDS Human protein_coding chr9:103348600 chr9:103348604 synonymous SNV . 0 25 hm5C_associated_SNPs_107825 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:103348596-103348626
64251 chr16 67943500 67943500 1 + T G LUSC 67943497 + 67943477 67943517 41 CAACTCAGTGGACATGTGGGCGCTGGGCGTCATTGCCTACA CAACTCAGTGGACATGTGGGCGCGGGGCGTCATTGCCTACA < 41bp 0.361483846902569 0.752669430084659 0.12702781 0.43862987 prediction 0.505338860169318 Functional Gain - PSKH1 ENSG00000159792 CDS Human protein_coding chr16:67943497 chr16:67943500 nonsynonymous SNV 0.977 4 24 hm5C_associated_SNPs_107827 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67943478-67943520
64251 chr1 44437261 44437261 1 + C G COAD 44437257 + 44437237 44437277 41 CTCTAAGGCCAGCCCTGACCCAGACCTTGACCCAGACCTGA CTCTAAGGCCAGCCCTGACCCAGAGCTTGACCCAGACCTGA < 41bp 0.459302785473888 0.752652559507962 0.5693281 0.8959471 prediction 0.505305119015924 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437257 chr1:44437261 nonsynonymous SNV 0.560 0 25 hm5C_associated_SNPs_107830 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44437230-44437261
64251 chr2 224824694 224824694 1 + C A BLCA 224824693 + 224824673 224824713 41 CCCTGTTACAGAGCAGTGGACCTGAGAGGACTGCACTTTTC CCCTGTTACAGAGCAGTGGACATGAGAGGACTGCACTTTTC < 41bp 0.505520055350335 0.758171302815678 0.58910143 0.8261967 prediction 0.505302494930686 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824693 chr2:224824694 nonsynonymous SNV 0.981 2 22 hm5C_associated_SNPs_107831 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:224824661-224824704
64251 chr4 110789053 110789053 1 + C A BRCA 110789052 + 110789032 110789072 41 TGATGCCACTGGCTTCCCCACCCCACAGATCACATGGACCA TGATGCCACTGGCTTCCCCACACCACAGATCACATGGACCA < 41bp 0.506299682609139 0.758950140862402 0.131679 0.09875214 prediction 0.505300916506526 Functional Gain - LRIT3 ENSG00000183423 CDS Human protein_coding chr4:110789052 chr4:110789053 synonymous SNV . 0 22 hm5C_associated_SNPs_107832 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:110789029-110789071
64251 chr20 55093441 55093441 1 + T G rs543178075 55093438 + 55093418 55093458 41 TATAGTTCTGTGTCATAAAGCTGTCCTGGCCAGCCTTCAAG TATAGTTCTGTGTCATAAAGCTGGCCTGGCCAGCCTTCAAG < 41bp 0.371510998265552 0.752643813366911 0.36678717 0.8118063 prediction 0.505287626733821 Functional Gain - RTFDC1 ENSG00000022277 UTR3 Human protein_coding chr20:55093438 chr20:55093441 . . 0 24 hm5C_associated_SNPs_107833 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:55093386-55093474
64251 chr12 104324182 104324182 1 + C G rs2070908 104324178 + 104324158 104324198 41 GTGAAAAGCGGCCCGACCTGCTTGCGGTGTAGTGGGCGGAC GTGAAAAGCGGCCCGACCTGCTTGGGGTGTAGTGGGCGGAC < 41bp 0.522302606133164 0.774930380080895 0.25968125 0.43259287 prediction 0.505255547895462 Functional Gain - HSP90B1 ENSG00000166598 UTR5 Human protein_coding chr12:104324178 chr12:104324182 . . 0 25 hm5C_associated_SNPs_107838 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:104324180-104324200
64251 chr3 9490166 9490166 1 + C A BRCA 9490162 + 9490142 9490182 41 TCACAACGGATCCAACTGTACTGGCAACGACCCTAAACATG TCACAACGGATCCAACTGTACTGGAAACGACCCTAAACATG < 41bp 0.334193098102749 0.752607029012388 0.1240854 0.13192296 prediction 0.505214058024776 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9490162 chr3:9490166 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_107842 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9490076-9490208
64251 chr1 149858580 149858580 1 + C A LUAD 149858576 + 149858556 149858596 41 CCCGCGCCAAGGCCAAGTCGCGCTCGTCCCGCGCTGGCCTC CCCGCGCCAAGGCCAAGTCGCGCTAGTCCCGCGCTGGCCTC < 41bp 0.646764715271711 0.899342673235521 0.29200196 0.43807614 prediction 0.50515591592762 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858576 chr1:149858580 stopgain 0.831 0 25 hm5C_associated_SNPs_107846 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:149858560-149858580
64251 chr10 70928377 70928377 1 + T C COAD 70928375 + 70928355 70928395 41 GATGAGGAAGACCGGAGGTACTTCAAACAGCAGGTATGGTG GATGAGGAAGACCGGAGGTACTCCAAACAGCAGGTATGGTG < 41bp 0.470800411482817 0.752543759747543 0.19335273 0.94805133 prediction 0.505087519495087 Functional Gain - VPS26A ENSG00000122958 CDS Human protein_coding chr10:70928375 chr10:70928377 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_107849 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:70928343-70928378
64251 chr16 28878700 28878700 1 + C G BLCA 28878699 + 28878679 28878719 41 TGCTCTTCTATCACAGACGTCCGGACAACCACAGCCCTGGA TGCTCTTCTATCACAGACGTCGGGACAACCACAGCCCTGGA < 41bp 0.432624638000059 0.752535442093362 0.29796404 0.8648813 prediction 0.505070884186725 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28878699 chr16:28878700 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_107851 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28878680-28878700
64251 chr15 75942203 75942203 1 + C A COAD 75942199 + 75942179 75942219 41 ATCAAAAGCTACATCTCCTACAAGCTCACACCCACCCATGC ATCAAAAGCTACATCTCCTACAAGATCACACCCACCCATGC < 41bp 0.344330566626295 0.752535333642435 0.04474497 0.028837591 prediction 0.50507066728487 Functional Gain - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75942199 chr15:75942203 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_107852 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:75942202-75942282
64251 chr22 23637323 23637323 1 + T C COAD 23637321 + 23637301 23637341 41 GGCGAGAGCACGGACAGACTCATGGGGAAGGGCCAGGTCCA GGCGAGAGCACGGACAGACTCACGGGGAAGGGCCAGGTCCA < 41bp 0.522742444767012 0.775252539866996 0.7725233 0.7956047 prediction 0.505020190199968 Functional Gain - BCR ENSG00000186716 CDS Human protein_coding chr22:23637321 chr22:23637323 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_107858 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:23637308-23637333
64251 chr2 99169339 99169339 1 + C T LUAD 99169338 + 99169318 99169358 41 CCAGATCAACACCCTGAAAACCCAAGTGAGTTACTACGCAG CCAGATCAACACCCTGAAAACTCAAGTGAGTTACTACGCAG < 41bp 0.525941854715938 0.778450259865086 0.2648108 0.659691 prediction 0.505016810298295 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99169338 chr2:99169339 synonymous SNV . 0 22 hm5C_associated_SNPs_107860 0 0 2 BUD13 POSTAR2 ENCODE chr2:99169254-99169365
64251 chr22 46671226 46671226 1 + T C STAD 46671224 + 46671204 46671244 41 TGTTGGCCCTGAAATTTTCCCATGATGCTTATTTTTACCTG TGTTGGCCCTGAAATTTTCCCACGATGCTTATTTTTACCTG < 41bp 0.564501359900623 0.817002601406163 0.106040746 0.026004255 prediction 0.505002483011079 Functional Gain - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46671224 chr22:46671226 synonymous SNV . 0 23 hm5C_associated_SNPs_107861 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:46671194-46671232
64251 chr1 40879873 40879873 1 + C T SKCM 40879872 + 40879852 40879892 41 CAGCTACCTCGGAAAAGCTCCCCGAAATCCACAGCGCCTGT CAGCTACCTCGGAAAAGCTCCTCGAAATCCACAGCGCCTGT < 41bp 0.482062171677888 0.752497707375143 0.13048929 0.690806 prediction 0.504995414750286 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40879872 chr1:40879873 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_107862 0 0 1 U2AF2 POSTAR2 ENCODE chr1:40879819-40879880
64251 chr19 57999333 57999333 1 + C G rs113628862 57999332 + 57999312 57999352 41 GGCTCCGATGGCGGCGGCCGCCCTGAGGGACCCCGCTCAGG GGCTCCGATGGCGGCGGCCGCGCTGAGGGACCCCGCTCAGG < 41bp 0.456475835849824 0.752485775321464 0.15168151 0.33130902 prediction 0.504971550642928 Functional Gain - ZNF419 ENSG00000105136;ENSG00000268107 CDS Human other chr19:57999332 chr19:57999333 synonymous SNV . 0 22 hm5C_associated_SNPs_107866 0 0 2 PRPF8 POSTAR2 ENCODE chr19:57999301-57999391
64251 chr11 61563566 61563566 1 + C G COAD 61563562 + 61563542 61563582 41 AGTATCCGGGGTATTGGGCCCAAGCGGGCTGTGGACCTCAT AGTATCCGGGGTATTGGGCCCAAGGGGGCTGTGGACCTCAT < 41bp 0.544952529934719 0.797416469475823 0.60692 0.9041797 prediction 0.504927879082208 Functional Gain - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563562 chr11:61563566 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_107869 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:61563500-61563580
64251 chr7 72301284 72301284 1 + T C rs138480824 72301282 + 72301262 72301302 41 CCCTCACAAGGGAAAAAGACCTTGATGAAGTTCTGCAGACC CCCTCACAAGGGAAAAAGACCTCGATGAAGTTCTGCAGACC < 41bp 0.488839247329243 0.752452739298897 0.17302674 0.4624551 prediction 0.504905478597794 Functional Gain - SBDSP1 ENSG00000225648 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:72301282 chr7:72301284 . . 0 23 hm5C_associated_SNPs_107871 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:72301277-72301304
64251 chr1 28599254 28599254 1 + C T SKCM 28599253 + 28599233 28599273 41 GCCCCCCAGGCACCTACACCCCCTAGTGAACAGAGCAGCCC GCCCCCCAGGCACCTACACCCTCTAGTGAACAGAGCAGCCC < 41bp 0.534033087678681 0.786473400074852 0.009419769 0.827762 prediction 0.504880624792343 Functional Gain - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28599253 chr1:28599254 nonsynonymous SNV 0.874 0 22 hm5C_associated_SNPs_107873 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:28599233-28599258
64251 chr19 55899415 55899415 1 + T C ESCA 55899413 + 55899393 55899433 41 AAGTACCGCCCCGACCTGCGCATGGTGAGCTGGGGTTTGGG AAGTACCGCCCCGACCTGCGCACGGTGAGCTGGGGTTTGGG < 41bp 0.496313066248662 0.752434414058902 0.41057217 0.25429255 prediction 0.504868828117803 Functional Gain - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899413 chr19:55899415 nonsynonymous SNV 0.815 3 23 hm5C_associated_SNPs_107874 0 0 2 PPIG POSTAR2 ENCODE chr19:55899409-55899487
64251 chr8 82644768 82644768 1 + C G rs79561719 82644767 + 82644747 82644787 41 CGCCTTTCCGGTCTGGGTCCCCGAGAGGACTGCCTTGCTCA CGCCTTTCCGGTCTGGGTCCCGGAGAGGACTGCCTTGCTCA < 41bp 0.549430279526383 0.801849517563632 0.7750568 0.91778016 prediction 0.504838476074497 Functional Gain - CHMP4C ENSG00000164695 UTR5 Human protein_coding chr8:82644767 chr8:82644768 . . 0 22 hm5C_associated_SNPs_107877 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chr8:82644751-82644779
64251 chr16 70500097 70500097 1 + C A UCEC 70500096 + 70500076 70500116 41 CTGCCTCCCCGTGGAGAACCCCGAGGCCCCCGTGGAAGCCT CTGCCTCCCCGTGGAGAACCCAGAGGCCCCCGTGGAAGCCT < 41bp 0.519114595056794 0.771519403829291 0.59513915 0.84485996 prediction 0.504809617544995 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70500096 chr16:70500097 synonymous SNV . 0 22 hm5C_associated_SNPs_107881 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:70500070-70500124
64251 chr5 178293284 178293284 1 + T C rs567321883 178293282 + 178293262 178293302 41 GGACGTGGCTGTGCTCTTTACCTGGGATGAGTGGAGAAAGC GGACGTGGCTGTGCTCTTTACCCGGGATGAGTGGAGAAAGC < 41bp 0.526111027374413 0.778513033455611 0.75203294 0.9213813 prediction 0.504804012162395 Functional Gain - ZNF354B ENSG00000178338 CDS Human protein_coding chr5:178293282 chr5:178293284 nonsynonymous SNV 0.116 0 23 hm5C_associated_SNPs_107882 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:178293263-178293287
64251 chr3 73024219 73024219 1 + C G LUSC 73024218 + 73024198 73024238 41 ACACTTTATGTGGACGAATCCCGCAAGTTTTTCTGAAGCAA ACACTTTATGTGGACGAATCCGGCAAGTTTTTCTGAAGCAA < 41bp 0.447372390094668 0.75240003816016 0.17643726 0.78920496 prediction 0.50480007632032 Functional Gain - GXYLT2 ENSG00000172986 CDS Human protein_coding chr3:73024218 chr3:73024219 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_107883 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr3:73024181-73024221
64251 chr19 35753487 35753487 1 + C G OV 35753486 + 35753466 35753506 41 GTGGTATGCCTGGCTGCCTTCCTCATCTTCCTCCTCCTGGG GTGGTATGCCTGGCTGCCTTCGTCATCTTCCTCCTCCTGGG < 41bp 0.432914177306181 0.752393482961327 0.12864637 0.14932266 prediction 0.504786965922654 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35753486 chr19:35753487 nonsynonymous SNV 0.880 3 22 hm5C_associated_SNPs_107884 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:35753466-35753490
64251 chr14 97321568 97321568 1 + T C GBM 97321566 + 97321546 97321586 41 CTTGGAAATTTATAGGTGTACTTGGTAGATTATGGCCTTGC CTTGGAAATTTATAGGTGTACTCGGTAGATTATGGCCTTGC < 41bp 0.477096880593068 0.75237804639442 0.3079744 0.31517684 prediction 0.504756092788841 Functional Gain - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97321566 chr14:97321568 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_107888 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:97321556-97321602
64251 chr10 134218210 134218210 1 + C A rs539073500 134218206 + 134218186 134218226 41 CTGTCAACGACAGCCATGGCCGGGCTCCCGAGGAGGGGGAT CTGTCAACGACAGCCATGGCCGGGATCCCGAGGAGGGGGAT < 41bp 0.652285296699693 0.904651828812563 0.9108609 0.91227144 prediction 0.504733064225741 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134218206 chr10:134218210 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_107889 0 0 1 EFTUD2 POSTAR2 ENCODE chr10:134218188-134218238
64251 chr9 95872979 95872979 1 + C G LUSC 95872975 + 95872955 95872995 41 ATCCATGCCCAGCCCCTGCACAGCCGCCTGCCCAGCCGCCA ATCCATGCCCAGCCCCTGCACAGCGGCCTGCCCAGCCGCCA < 41bp 0.582432573318179 0.834785783386213 0.24006844 0.71351814 prediction 0.504706420136067 Functional Gain - CARD19 ENSG00000165233 CDS Human protein_coding chr9:95872975 chr9:95872979 nonsynonymous SNV 0.423 0 25 hm5C_associated_SNPs_107891 0 0 2 PRPF8 POSTAR2 ENCODE chr9:95872965-95873038
64251 chr20 30358241 30358241 1 + T C OV 30358239 + 30358219 30358259 41 AGATGTGCCACTCCTGTAATCATCGATGAAATTCTACCCTC AGATGTGCCACTCCTGTAATCACCGATGAAATTCTACCCTC < 41bp 0.520173643701746 0.772500710012186 0.33727482 0.4233619 prediction 0.50465413262088 Functional Gain - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30358239 chr20:30358241 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_107897 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30358145-30358260
64251 chr6 36654524 36654524 1 + C G rs74801436 36654520 + 36654500 36654540 41 AGAAGAAGGGCACCCTAGTTCTACCTCAGGCAGCTCAAGCA AGAAGAAGGGCACCCTAGTTCTACGTCAGGCAGCTCAAGCA < 41bp 0.484294704103573 0.752310064830785 0.13243508 0.1725893 prediction 0.50462012966157 Functional Gain - CDKN1A ENSG00000124762 UTR3 Human protein_coding chr6:36654520 chr6:36654524 . . 0 25 hm5C_associated_SNPs_107899 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:36654518-36654538
64251 chr4 1374774 1374774 1 + C G rs28522910 1374770 + 1374750 1374790 41 GGCAGCTGCAGAAGCAGGAGCGCCCGGGTAGGTCTGGGCAA GGCAGCTGCAGAAGCAGGAGCGCCGGGGTAGGTCTGGGCAA < 41bp 0.548072611575253 0.800363998867558 0.6090539 0.8156955 prediction 0.50458277458461 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1374770 chr4:1374774 nonsynonymous SNV 0.008 2 25 hm5C_associated_SNPs_107903 0 0 1 PPIG POSTAR2 ENCODE chr4:1374681-1374775
64251 chr7 99689103 99689103 1 + C G SKCM 99689099 + 99689079 99689119 41 CCTATGCTCTGTGTCACTGTCTCCCGGTGCTCAGCACAGAC CCTATGCTCTGTGTCACTGTCTCCGGGTGCTCAGCACAGAC < 41bp 0.541929223899607 0.794198080316652 0.22974116 0.5655411 prediction 0.50453771283409 Functional Gain - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99689099 chr7:99689103 nonsynonymous SNV 0.886 4 25 hm5C_associated_SNPs_107906 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr7:99689097-99689126
64251 chr11 64853932 64853932 1 + C T SKCM 64853931 + 64853911 64853951 41 ATGAACGTGCTGCCCAGCTACCCCGAAACACGGCACCTGCC ATGAACGTGCTGCCCAGCTACTCCGAAACACGGCACCTGCC < 41bp 0.532304650867887 0.784567379835479 0.22850159 0.47430995 prediction 0.504525457935183 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64853931 chr11:64853932 nonsynonymous SNV 0.995 5 22 hm5C_associated_SNPs_107907 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64853913-64853935
64251 chr14 89069204 89069204 1 + C T UCEC 89069203 + 89069183 89069223 41 AACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCTG AACCAGATAAACCTGCAAGTCTCAAGTTTATAGTGACGCTG < 41bp 0.510709250237812 0.76296986731944 0.41543806 0.713051 prediction 0.504521234163255 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89069203 chr14:89069204 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_107908 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:89069178-89069208
64251 chr6 31379068 31379068 1 + C A UCEC 31379064 + 31379044 31379084 41 TGAAGACCAAGACACACTATCACGCTATGCATGCAGACTGC TGAAGACCAAGACACACTATCACGATATGCATGCAGACTGC < 41bp 0.409115786899503 0.752252441733768 0.21742669 0.42615202 prediction 0.504504883467536 Functional Gain - MICA ENSG00000204520 CDS Human protein_coding chr6:31379064 chr6:31379068 nonsynonymous SNV 0.000 3 25 hm5C_associated_SNPs_107910 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:31379064-31379091
64251 chr20 48600475 48600475 1 + C A rs34261470 48600471 + 48600451 48600491 41 TGCTCATCTGGGACTCTGTCCTGGCGCCCCAAGCCCAGCCA TGCTCATCTGGGACTCTGTCCTGGAGCCCCAAGCCCAGCCA < 41bp 0.670698813348985 0.922942216026026 0.58402777 0.82936627 prediction 0.504486805354083 Functional Gain - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600471 chr20:48600475 nonsynonymous SNV 0.537 0 25 hm5C_associated_SNPs_107913 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:48600455-48600479
64251 chr1 246810817 246810817 1 + C G UCEC 246810813 + 246810793 246810833 41 GACAGAGCCGTTGATTTCACCAGGCTGTGACCGTATACCTC GACAGAGCCGTTGATTTCACCAGGGTGTGACCGTATACCTC < 41bp 0.462744427313087 0.752213080510666 0.46885747 0.8641499 prediction 0.504426161021332 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810813 chr1:246810817 synonymous SNV . 0 25 hm5C_associated_SNPs_107921 0 0 1 RBM15 POSTAR2 ENCODE chr1:246810762-246810839
64251 chr8 90933391 90933391 1 + T A LAML 90933387 + 90933367 90933407 41 TAAATTTAAGGACTGGGTATCAAGTAAACGAAGGTAAAGAT TAAATTTAAGGACTGGGTATCAAGAAAACGAAGGTAAAGAT < 41bp 0.439629013502014 0.752205412732323 0.40284002 0.86154926 prediction 0.504410825464647 Functional Gain - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90933387 chr8:90933391 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_107922 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:90933374-90933409
64251 chr21 47409530 47409530 1 + C G SKCM 47409529 + 47409509 47409549 41 TCCTGTGTTCCAGGGAAGACCCGGGGACCTCGGACCTGTTG TCCTGTGTTCCAGGGAAGACCGGGGGACCTCGGACCTGTTG < 41bp 0.610695999448081 0.862893406988047 0.92184126 0.94366336 prediction 0.50439481507993 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47409529 chr21:47409530 synonymous SNV . 0 22 hm5C_associated_SNPs_107924 0 0 2 EFTUD2 POSTAR2 ENCODE chr21:47409459-47409562
64251 chr22 20939299 20939299 1 + T C UCEC 20939297 + 20939277 20939317 41 ACCGCCATTCACGGCCCACCCATCACGTATGTCCAGCTGGG ACCGCCATTCACGGCCCACCCACCACGTATGTCCAGCTGGG < 41bp 0.518916707542944 0.771092335557441 0.10042071 0.16733295 prediction 0.504351256028995 Functional Gain - MED15 ENSG00000099917 CDS Human protein_coding chr22:20939297 chr22:20939299 nonsynonymous SNV 0.961 3 23 hm5C_associated_SNPs_107927 0 0 2 IGF2BP2 POSTAR2 ENCODE chr22:20939287-20939302
64251 chr5 153432624 153432624 1 + T C LUAD 153432622 + 153432602 153432642 41 GTTATCTTCACCTCGGGAGACATGAGTGTCTATTACATGAT GTTATCTTCACCTCGGGAGACACGAGTGTCTATTACATGAT < 41bp 0.553430387650803 0.805600483823935 0.2517996 0.29571563 prediction 0.504340192346264 Functional Gain - MFAP3 ENSG00000037749 CDS Human protein_coding chr5:153432622 chr5:153432624 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_107929 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:153432578-153432625
64251 chr19 1924653 1924653 1 + C A rs3810415 1924652 + 1924632 1924672 41 TCGGCCGCCCTCCCGTCCTCCCAGAGCTGCTGGCGCTGAGG TCGGCCGCCCTCCCGTCCTCCAAGAGCTGCTGGCGCTGAGG < 41bp 0.521220726002213 0.773383198442068 0.45507473 0.2245959 prediction 0.504324944879711 Functional Gain - SCAMP4 ENSG00000227500 UTR3 Human protein_coding chr19:1924652 chr19:1924653 . . 0 22 hm5C_associated_SNPs_107931 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1924638-1924662
64251 chr19 5623138 5623138 1 + C A rs143563020 5623134 + 5623114 5623154 41 CGACTGGAGCGGTTCCCTCGCAGGCGGCGCCATTTTGTGCT CGACTGGAGCGGTTCCCTCGCAGGAGGCGCCATTTTGTGCT < 41bp 0.618926780183185 0.871080934303061 0.9166477 0.9252555 prediction 0.504308308239753 Functional Gain - SAFB ENSG00000160633 UTR5 Human protein_coding chr19:5623134 chr19:5623138 . . 0 25 hm5C_associated_SNPs_107933 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:5623120-5623140
64251 chr4 2901077 2901077 1 + C A UCEC 2901076 + 2901056 2901096 41 AGTCCCGTTCCCCAGGGTCTCCGGTAGGGGAAGGCACTGGA AGTCCCGTTCCCCAGGGTCTCAGGTAGGGGAAGGCACTGGA < 41bp 0.508747003863393 0.760896762040469 0.598567 0.89630735 prediction 0.504299516354152 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2901076 chr4:2901077 nonsynonymous SNV 0.207 3 22 hm5C_associated_SNPs_107934 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:2901068-2901086
64251 chr1 113659009 113659009 1 + T C UCEC 113659007 + 113658987 113659027 41 GCAACTCTGAGGCAGGCAGTCATCAGCAACTTATGCCTCCT GCAACTCTGAGGCAGGCAGTCACCAGCAACTTATGCCTCCT < 41bp 0.577274620806039 0.829413870693864 0.10263708 0.1294502 prediction 0.50427849977565 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113659007 chr1:113659009 synonymous SNV . 0 23 hm5C_associated_SNPs_107935 0 0 1 DDX24 POSTAR2 ENCODE chr1:113658925-113659059
64251 chr19 14578588 14578588 1 + C A ESCA 14578587 + 14578567 14578607 41 AAGTTCCTGGCGGTGCTGGGCCGGGGTCATTTTGGGAAGGT AAGTTCCTGGCGGTGCTGGGCAGGGGTCATTTTGGGAAGGT < 41bp 0.519539832694875 0.771670619803159 0.6487496 0.83836603 prediction 0.504261574216568 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14578587 chr19:14578588 synonymous SNV . 0 22 hm5C_associated_SNPs_107938 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14578561-14578590
64251 chr12 113629445 113629445 1 + T A OV 113629441 + 113629421 113629461 41 CCACCTGAATGTCCCCAGCACTGGTCATCCAGCCACCAGTG CCACCTGAATGTCCCCAGCACTGGACATCCAGCCACCAGTG < 41bp 0.60763635592483 0.859764899695125 0.21474081 0.4141584 prediction 0.504257087540589 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629441 chr12:113629445 synonymous SNV . 0 25 hm5C_associated_SNPs_107939 0 0 1 PCBP2 POSTAR2 ENCODE chr12:113629402-113629466
64251 chr19 2247848 2247848 1 + C A PAAD 2247844 + 2247824 2247864 41 CTGGCCCCCCTGGGGTGAAGCGGCCTCCACCCCCGCTGATG CTGGCCCCCCTGGGGTGAAGCGGCATCCACCCCCGCTGATG < 41bp 0.656241746036616 0.908363736597614 0.6377219 0.86480725 prediction 0.504243981121996 Functional Gain - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2247844 chr19:2247848 nonsynonymous SNV 0.645 4 25 hm5C_associated_SNPs_107941 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:2247819-2247940
64251 chr10 51769427 51769427 1 + C T SKCM 51769426 + 51769406 51769446 41 CAGTCTTGGCCCCCACCTTTCCCGTGTGCGATCTCTGGAGC CAGTCTTGGCCCCCACCTTTCTCGTGTGCGATCTCTGGAGC < 41bp 0.511552013208077 0.763672125103414 0.064947456 0.066628516 prediction 0.504240223790674 Functional Gain - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51769426 chr10:51769427 synonymous SNV . 0 22 hm5C_associated_SNPs_107943 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:51769410-51769443
64251 chr22 18640461 18640461 1 + A G LUAD 18640458 + 18640438 18640478 41 AGGCGTTTGGGCTCCTGAGGCAAATCTGTCAGTCCATCCTG AGGCGTTTGGGCTCCTGAGGCAAGTCTGTCAGTCCATCCTG < 41bp 0.498000206670494 0.752106347522276 0.40013725 0.76783705 prediction 0.504212695044553 Functional Gain - USP18 ENSG00000184979 CDS Human protein_coding chr22:18640458 chr22:18640461 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_107947 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:18640441-18640461
64251 chr5 68555730 68555730 1 + C G PRAD 68555729 + 68555709 68555749 41 TGGCCAAATCTTTTGGGAGCCCCAATAGAGCTTATACACAT TGGCCAAATCTTTTGGGAGCCGCAATAGAGCTTATACACAT < 41bp 0.45338177566536 0.752105794808514 0.41821176 0.36875248 prediction 0.504211589617028 Functional Gain - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68555729 chr5:68555730 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_107948 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:68555711-68555736
64251 chr3 15064822 15064822 1 + T A rs2230441 15064818 + 15064798 15064838 41 CCTGAGAAGTCCCCTGATAGCTACTCCCACGTTTGTGGCAG CCTGAGAAGTCCCCTGATAGCTACACCCACGTTTGTGGCAG < 41bp 0.402258902361453 0.752102278341595 0.08881742 0.22085702 prediction 0.50420455668319 Functional Gain - NR2C2 ENSG00000177463 CDS Human protein_coding chr3:15064818 chr3:15064822 synonymous SNV . 0 25 hm5C_associated_SNPs_107949 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:15064770-15064825
64251 chr19 35633635 35633635 1 + C G rs61753924 35633634 + 35633614 35633654 41 TTCCCCCCAGGTCTGTCCACCCGCAGGCGGTAGAAACACCT TTCCCCCCAGGTCTGTCCACCGGCAGGCGGTAGAAACACCT < 41bp 0.429323228163384 0.752095505934418 0.019670397 0.26289183 prediction 0.504191011868837 Functional Gain - FXYD1 ENSG00000266964 CDS Human protein_coding chr19:35633634 chr19:35633635 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_107950 0 0 4 BUD13 POSTAR2 ENCODE chr19:35633623-35633638
64251 chr19 9271853 9271853 1 + T C LIHC 9271851 + 9271831 9271871 41 TGTAGGCAGTGTGGCAAGGCCTTCAGGAACCAGTCAACGCT TGTAGGCAGTGTGGCAAGGCCTCCAGGAACCAGTCAACGCT < 41bp 0.563999685649254 0.816075466808986 0.081626534 0.9237784 prediction 0.504151562319463 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271851 chr19:9271853 nonsynonymous SNV 0.985 4 23 hm5C_associated_SNPs_107954 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:9271816-9271853
64251 chr22 35783041 35783041 1 + C T BLCA 35783040 + 35783020 35783060 41 GGCCTGGCCTTCTTCACCTTCCCCAACATTGCCAGTGCCAC GGCCTGGCCTTCTTCACCTTCTCCAACATTGCCAGTGCCAC < 41bp 0.472682078165752 0.752049624736607 0.047098428 0.960781 prediction 0.504099249473215 Functional Gain - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783040 chr22:35783041 nonsynonymous SNV 0.973 4 22 hm5C_associated_SNPs_107957 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr6 16295482 16295482 1 + C A rs77813716 16295481 + 16295461 16295501 41 ACCTGCTTTTCCCATCTCCCCCCAAGTCTGTTCCGTCAGAG ACCTGCTTTTCCCATCTCCCCACAAGTCTGTTCCGTCAGAG < 41bp 0.512908819888548 0.764954628450447 0.12333241 0.24009281 prediction 0.504091617123797 Functional Gain - GMPR ENSG00000137198 UTR3 Human protein_coding chr6:16295481 chr6:16295482 . . 0 22 hm5C_associated_SNPs_107959 0 0 2 RPS3 POSTAR2 ENCODE chr6:16295444-16295528
64251 chr22 38055211 38055211 1 + C G LUSC 38055210 + 38055190 38055230 41 GCGCGGGGGACGGCGCGGCCCCGCGCGTGCGCGCCGTGCTT GCGCGGGGGACGGCGCGGCCCGGCGCGTGCGCGCCGTGCTT < 41bp 0.576949466227888 0.828993103448036 0.27076113 0.7353448 prediction 0.504087274440295 Functional Gain - PDXP ENSG00000241360 CDS Human protein_coding chr22:38055210 chr22:38055211 nonsynonymous SNV 0.508 1 22 hm5C_associated_SNPs_107960 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr22:38055204-38055232
64251 chrX 48340877 48340877 1 + C T COAD 48340876 + 48340856 48340896 41 CTGAGCTCCTATGATTCGGACCGCAGTTACCCACTGGACGT CTGAGCTCCTATGATTCGGACTGCAGTTACCCACTGGACGT < 41bp 0.502966415794981 0.755002502510259 0.21878597 0.16019452 prediction 0.504072173430555 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48340876 chrX:48340877 nonsynonymous SNV 0.858 0 22 hm5C_associated_SNPs_107962 1 0 3 DDX24 POSTAR2 ENCODE chrX:48340821-48340895
64251 chr20 34487474 34487474 1 + C T SKCM 34487473 + 34487453 34487493 41 TCACTGGAGCCAGAAGAGAGCCCGGGAAAGAGGCATGTCCA TCACTGGAGCCAGAAGAGAGCTCGGGAAAGAGGCATGTCCA < 41bp 0.501239305891405 0.753206416635121 0.6745042 0.49750674 prediction 0.503934221487431 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34487473 chr20:34487474 nonsynonymous SNV 0.976 0 22 hm5C_associated_SNPs_107973 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr20:34487444-34487475
64251 chr19 33600768 33600768 1 + C T SKCM 33600767 + 33600747 33600787 41 GAGCAGCAGAGCCCAGCTCTCCCCTGCAGCGGCTGCTGGGC GAGCAGCAGAGCCCAGCTCTCTCCTGCAGCGGCTGCTGGGC < 41bp 0.519685069328478 0.771648500941232 0.10014823 0.25272712 prediction 0.503926863225508 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33600767 chr19:33600768 synonymous SNV . 0 22 hm5C_associated_SNPs_107975 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:33600760-33600780
64251 chr10 89624228 89624228 1 + T C COAD 89624226 + 89624206 89624246 41 TTCAGCCACAGGCTCCCAGACATGACAGCCATCATCAAAGA TTCAGCCACAGGCTCCCAGACACGACAGCCATCATCAAAGA < 41bp 0.523032162811321 0.774966026106226 0.06020102 0.050652474 prediction 0.503867726589811 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89624226 chr10:89624228 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_107979 0 0 2 RBM15 POSTAR2 ENCODE chr10:89624201-89624236
64251 chr4 129764136 129764136 1 + C T SKCM 129764135 + 129764115 129764155 41 AACTACTTGGTCCCAGAATTCCCGATCCCAGCATAGGAGAA AACTACTTGGTCCCAGAATTCTCGATCCCAGCATAGGAGAA < 41bp 0.530686231949256 0.78260768426607 0.12658334 0.3727952 prediction 0.503842904633629 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129764135 chr4:129764136 synonymous SNV . 0 22 hm5C_associated_SNPs_107981 0 0 5 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr4:129764120-129764140
64251 chr12 132401566 132401566 1 + C G rs11546871 132401565 + 132401545 132401585 41 TTGGGACACAAGCCCCGGACCCGGGCAGCACGGAGAGCCTG TTGGGACACAAGCCCCGGACCGGGGCAGCACGGAGAGCCTG < 41bp 0.431002331824139 0.751913861929042 0.74248564 0.89322984 prediction 0.503827723858085 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132401565 chr12:132401566 nonsynonymous SNV 0.043 0 22 hm5C_associated_SNPs_107983 0 0 3 PPIG POSTAR2 ENCODE chr12:132401548-132401590
64251 chr5 145643075 145643075 1 + T G GBM 145643073 + 145643053 145643093 41 GATGATGAGCAAACCACAGACATCAGGTGCATATGTTCTTA GATGATGAGCAAACCACAGACAGCAGGTGCATATGTTCTTA < 41bp 0.433750201303336 0.751905466230622 0.22257295 0.37491876 prediction 0.503810932461243 Functional Gain - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145643073 chr5:145643075 nonsynonymous SNV 0.980 0 23 hm5C_associated_SNPs_107985 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:145643061-145643087
64251 chr7 6617247 6617247 1 + C G rs11559147 6617246 + 6617226 6617266 41 CCGTCCCACCCCCACCTCGCCCGAGTCCGGGGCGGCCCCGG CCGTCCCACCCCCACCTCGCCGGAGTCCGGGGCGGCCCCGG < 41bp 0.545515065903221 0.79741872691268 0.17098242 0.9303057 prediction 0.503807322018918 Functional Gain - ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617246 chr7:6617247 . . 0 22 hm5C_associated_SNPs_107986 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr19 52206224 52206224 1 + C G UCEC 52206223 + 52206203 52206243 41 TCTCAAATGGGCCAAGGGCCCCGGGCTTGGAAGGGCAGGTG TCTCAAATGGGCCAAGGGCCCGGGGCTTGGAAGGGCAGGTG < 41bp 0.58711586752804 0.839018508407977 0.49457476 0.8886139 prediction 0.503805281759873 Functional Gain - SPACA6 ENSG00000182310 ncRNA_exonic Human protein_coding chr19:52206223 chr19:52206224 . . 0 22 hm5C_associated_SNPs_107987 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221668 chr19:52206220-52206240
64251 chr5 156746874 156746874 1 + C A UCEC 156746873 + 156746853 156746893 41 CGCGGCATTGCAGGACTTCGCCCAGGTGACGCTGCGTGAGC CGCGGCATTGCAGGACTTCGCACAGGTGACGCTGCGTGAGC < 41bp 0.496540215593287 0.751895163861254 0.13692757 0.5062205 prediction 0.503790327722508 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156746873 chr5:156746874 synonymous SNV . 0 22 hm5C_associated_SNPs_107990 0 0 1 BUD13 POSTAR2 ENCODE chr5:156746847-156746939
64251 chr17 16318972 16318972 1 + C G rs77272400 16318971 + 16318951 16318991 41 GCCAGGTGGGCTGAGGGTGACCGAGAGACCAGAACCTGCTT GCCAGGTGGGCTGAGGGTGACGGAGAGACCAGAACCTGCTT < 41bp 0.461688123376984 0.751889268332002 0.42551413 0.88115764 prediction 0.503778536664003 Functional Gain - TRPV2 ENSG00000264739 ncRNA_exonic Human antisense chr17:16318971 chr17:16318972 . . 0 22 hm5C_associated_SNPs_107991 0 0 3 DDX3X POSTAR2 ENCODE chr17:16318923-16319005
64251 chr5 140080460 140080460 1 + C G rs145640336 140080459 + 140080439 140080479 41 AGATGAATATGAGAAACTCGCCGAGAAGAGGCTCACGGAAG AGATGAATATGAGAAACTCGCGGAGAAGAGGCTCACGGAAG < 41bp 0.580151252635674 0.8320257528295 0.4750633 0.90319014 prediction 0.503749000387652 Functional Gain - ZMAT2 ENSG00000146007 CDS Human protein_coding chr5:140080459 chr5:140080460 synonymous SNV . 0 22 hm5C_associated_SNPs_107992 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:140080412-140080460
64251 chr17 66042012 66042012 1 + T C UCEC 66042010 + 66041990 66042030 41 GTGTATAAGGCTTCGTTAAGCTTAATTGAGAAGTATTTCTC GTGTATAAGGCTTCGTTAAGCTCAATTGAGAAGTATTTCTC < 41bp 0.469022910011941 0.751858297621103 0.045048147 0.07068542 prediction 0.503716595242205 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66042010 chr17:66042012 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_107993 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:66041947-66042038
64251 chr2 27745432 27745432 1 + C G LUAD 27745428 + 27745408 27745448 41 ATTCGGGCTGCTCCCATCTCCTGCCATGTCCAGGTTGCACA ATTCGGGCTGCTCCCATCTCCTGCGATGTCCAGGTTGCACA < 41bp 0.460872523925143 0.751857701802287 0.067302555 0.18721256 prediction 0.503715403604573 Functional Gain - GCKR ENSG00000084734 CDS Human protein_coding chr2:27745428 chr2:27745432 nonsynonymous SNV 0.794 4 25 hm5C_associated_SNPs_107994 0 0 1 LSM11 POSTAR2 ENCODE chr2:27745419-27745459
64251 chr19 36142225 36142225 1 + C G GBM 36142221 + 36142201 36142241 41 GCCGCTTCCCCAACCAGAACCAGACTAGAAACTGCTGGCAG GCCGCTTCCCCAACCAGAACCAGAGTAGAAACTGCTGGCAG < 41bp 0.522355359330157 0.774208666051741 0.31031856 0.90038 prediction 0.503706613443169 Functional Gain - COX6B1 ENSG00000126267 CDS Human protein_coding chr19:36142221 chr19:36142225 nonsynonymous SNV 0.914 5 25 hm5C_associated_SNPs_107996 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:36142132-36142225
64251 chr10 134219126 134219126 1 + C G rs374025458 134219122 + 134219102 134219142 41 GGCGCCCTGTGCGGACGGCCCTGCCGGTGGGCTGGCGGACT GGCGCCCTGTGCGGACGGCCCTGCGGGTGGGCTGGCGGACT < 41bp 0.561305159282718 0.813158172988641 0.47886384 0.86611676 prediction 0.503706027411846 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134219122 chr10:134219126 synonymous SNV . 0 25 hm5C_associated_SNPs_107997 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr10:134219112-134219135
64251 chr17 57684530 57684530 1 + C G LUAD 57684526 + 57684506 57684546 41 CAGTGACACACGAAAGGAAACAGGCTAAGGTGGTGAACCCT CAGTGACACACGAAAGGAAACAGGGTAAGGTGGTGAACCCT < 41bp 0.559101615020398 0.810935105186649 0.28495413 0.8594067 prediction 0.503666980332502 Functional Gain - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57684526 chr17:57684530 synonymous SNV . 0 25 hm5C_associated_SNPs_108002 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:57684529-57684554
64251 chr19 54656240 54656240 1 + C T SKCM 54656239 + 54656219 54656259 41 AGCTGTCAGAGGTGAACATACCGCTGTCGCTGGGTGTCTGT AGCTGTCAGAGGTGAACATACTGCTGTCGCTGGGTGTCTGT < 41bp 0.504584284516064 0.756412026321834 0.35805008 0.32210267 prediction 0.50365548361154 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54656239 chr19:54656240 nonsynonymous SNV 0.969 4 22 hm5C_associated_SNPs_108004 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:54656220-54656252
64251 chr4 38701177 38701177 1 + C G rs142698924 38701176 + 38701156 38701196 41 GATCTGGGATCAGCTTTGAGCCTGAGTTCAGTGAATAGCCT GATCTGGGATCAGCTTTGAGCGTGAGTTCAGTGAATAGCCT < 41bp 0.478102409362365 0.751815774779324 0.12264833 0.32271063 prediction 0.503631549558649 Functional Gain - KLF3 ENSG00000109787 UTR3 Human protein_coding chr4:38701176 chr4:38701177 . . 0 22 hm5C_associated_SNPs_108008 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:38701157-38701184
64251 chr8 55060069 55060069 1 + C G LUAD 55060068 + 55060048 55060088 41 TGGGTACCTGGCGGATCCTGCCAAATTTCCTGAAGCACGAC TGGGTACCTGGCGGATCCTGCGAAATTTCCTGAAGCACGAC < 41bp 0.439382911783103 0.751813059011821 0.22859633 0.2559948 prediction 0.503626118023643 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060068 chr8:55060069 synonymous SNV . 0 22 hm5C_associated_SNPs_108009 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55060020-55060100
64251 chr10 13213187 13213187 1 + C T CESC 13213186 + 13213166 13213206 41 AACAGATGAAGAAGAAGTTCCCGCATCACAGTCAACTGAAA AACAGATGAAGAAGAAGTTCCTGCATCACAGTCAACTGAAA < 41bp 0.508429112261955 0.76023470480356 0.12785 0.2525488 prediction 0.50361118508321 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13213186 chr10:13213187 synonymous SNV . 0 22 hm5C_associated_SNPs_108011 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:13213147-13213189
64251 chr6 27222836 27222836 1 + C T LGG 27222835 + 27222815 27222855 41 TCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTT TCAGAATCAACTCTTCTTATCTGCACTGGCTCCCACTGCTT < 41bp 0.514769699813892 0.766548956018657 0.42613184 0.2925558 prediction 0.50355851240953 Functional Gain - PRSS16 ENSG00000112812 CDS Human protein_coding chr6:27222835 chr6:27222836 nonsynonymous SNV 0.063 2 22 hm5C_associated_SNPs_108019 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486177 chr6:27222820-27222840
64251 chr5 14664833 14664833 1 + C G rs181297196 14664832 + 14664812 14664852 41 GCTCTGCGGGCCCTCGGAAACCGCCCCGGCGGCTGAGAGGC GCTCTGCGGGCCCTCGGAAACGGCCCCGGCGGCTGAGAGGC < 41bp 0.556965565963227 0.808725601266611 0.2628194 0.4740793 prediction 0.50352007060677 Functional Gain - OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664832 chr5:14664833 . . 0 22 hm5C_associated_SNPs_108021 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr12 53670563 53670563 1 + C A rs61760168 53670562 + 53670542 53670582 41 GAGCCCCGAGGAGACACCAGCCGGGGCCTGGGCACGAGCCA GAGCCCCGAGGAGACACCAGCAGGGGCCTGGGCACGAGCCA < 41bp 0.526658033438451 0.778399276756968 0.9245558 0.9377581 prediction 0.503482486637034 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670562 chr12:53670563 synonymous SNV . 0 22 hm5C_associated_SNPs_108023 0 0 6 AARS POSTAR2 ENCODE chr12:53670528-53670595
64251 chr17 68129132 68129132 1 + C A SKCM 68129131 + 68129111 68129151 41 TCTAGAAGCTCCTATGTTCCCCGAGAAATTCTCTGGGGCCA TCTAGAAGCTCCTATGTTCCCAGAGAAATTCTCTGGGGCCA < 41bp 0.511884534631551 0.763618895677461 0.42338988 0.867503 prediction 0.50346872209182 Functional Gain - KCNJ16 ENSG00000153822 CDS Human protein_coding chr17:68129131 chr17:68129132 synonymous SNV . 0 22 hm5C_associated_SNPs_108025 0 0 1 HNRNPC POSTAR2 SRX1438577 chr17:68129120-68129140
64251 chr6 4892381 4892381 1 + C T rs734783 4892380 + 4892360 4892400 41 AAGCCCCGTTAAGAGCAGGACCGCAGTGGACGGCTTTCAGA AAGCCCCGTTAAGAGCAGGACTGCAGTGGACGGCTTTCAGA < 41bp 0.49732944744843 0.751709539587114 0.38343826 0.74641776 prediction 0.503419079174228 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892380 chr6:4892381 synonymous SNV . 0 22 hm5C_associated_SNPs_108032 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:4892358-4892402
64251 chr11 62550237 62550237 1 + T G rs139505440 62550235 + 62550215 62550255 41 TGCAGAAGATCCTGGCAGATCCTGTGCGGCCGCTCTGCTGC TGCAGAAGATCCTGGCAGATCCGGTGCGGCCGCTCTGCTGC < 41bp 0.396010503729348 0.751704009659723 0.057902485 0.2954212 prediction 0.503408019319447 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62550235 chr11:62550237 synonymous SNV . 0 23 hm5C_associated_SNPs_108038 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:62550232-62550272
64251 chr10 45878095 45878095 1 + C A LUSC 45878094 + 45878074 45878114 41 CCCCTGCTACCGCTGGATCACCGGCGATGTCGAGGTTGTCC CCCCTGCTACCGCTGGATCACAGGCGATGTCGAGGTTGTCC < 41bp 0.540277007919013 0.79192677253522 0.52120095 0.78190887 prediction 0.503299529232414 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45878094 chr10:45878095 synonymous SNV . 0 22 hm5C_associated_SNPs_108048 0 0 1 UCHL5 POSTAR2 ENCODE chr10:45878088-45878134
64251 chr1 6649173 6649173 1 + C G rs1804904 6649172 + 6649152 6649192 41 CGGCCTGGCCTCCCAGCTCCCCGGCCAGAGACTGTGTGCAG CGGCCTGGCCTCCCAGCTCCCGGGCCAGAGACTGTGTGCAG < 41bp 0.602318610828688 0.853962529453679 0.11909199 0.9026636 prediction 0.503287837249983 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6649172 chr1:6649173 synonymous SNV . 0 22 hm5C_associated_SNPs_108049 0 0 3 DDX55 POSTAR2 ENCODE chr1:6649127-6649175
64251 chr2 27666273 27666273 1 + C A OV 27666269 + 27666249 27666289 41 CCTTCTTGCTTTTCAGGATACAGCCTTGGCTCTCTGGATCC CCTTCTTGCTTTTCAGGATACAGCATTGGCTCTCTGGATCC < 41bp 0.350088935763155 0.75160072795834 0.008412689 0.010998219 prediction 0.50320145591668 Functional Gain - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27666269 chr2:27666273 synonymous SNV . 0 25 hm5C_associated_SNPs_108056 0 0 1 U2AF2 POSTAR2 ENCODE chr2:27666242-27666334
64251 chr1 179013215 179013215 1 + C A COAD 179013214 + 179013194 179013234 41 TGGTTCCCCGGGAAGTGTACCCTGAAGAGACACCAGAGCTG TGGTTCCCCGGGAAGTGTACCATGAAGAGACACCAGAGCTG < 41bp 0.51130031695708 0.762897536916781 0.06541708 0.14940014 prediction 0.503194439919401 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179013214 chr1:179013215 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_108057 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:179013187-179013217
64251 chr12 100707294 100707294 1 + C T SKCM 100707293 + 100707273 100707313 41 ATGTAACTCCGACTGTAAGACCAGATGCAGATCAAATGACA ATGTAACTCCGACTGTAAGACTAGATGCAGATCAAATGACA < 41bp 0.504552649343154 0.756147364867496 0.3485812 0.07430178 prediction 0.503189431048684 Functional Gain - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100707293 chr12:100707294 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_108058 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:100707236-100707304
64251 chr1 6688666 6688666 1 + C T HNSC 6688665 + 6688645 6688685 41 TCTGCTCCGAGCACTTCCGGCCAGAGTGCTTCAGCGCCTTT TCTGCTCCGAGCACTTCCGGCTAGAGTGCTTCAGCGCCTTT < 41bp 0.51017714580954 0.761766322000843 0.18593684 0.20809898 prediction 0.503178352382606 Functional Gain - THAP3 ENSG00000041988 CDS Human protein_coding chr1:6688665 chr1:6688666 nonsynonymous SNV 0.400 5 22 hm5C_associated_SNPs_108060 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:6688646-6688668
64251 chr12 123463804 123463804 1 + C G KIRP 123463800 + 123463780 123463820 41 AACAGCCTCTGTCCCATGTGCTGCCGTGAGCCCGACCTGGT AACAGCCTCTGTCCCATGTGCTGCGGTGAGCCCGACCTGGT < 41bp 0.551168232948391 0.802744046568065 0.108214825 0.28270793 prediction 0.503151627239349 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463800 chr12:123463804 nonsynonymous SNV 0.010 2 25 hm5C_associated_SNPs_108062 0 0 3 NONO POSTAR2 ENCODE chr12:123463763-123463829
64251 chr14 75894945 75894945 1 + C G rs113661747 75894941 + 75894921 75894961 41 CCGGGGGCGCCGCCTCCCCCCGCACCTTCTGCACGGTGGGT CCGGGGGCGCCGCCTCCCCCCGCAGCTTCTGCACGGTGGGT < 41bp 0.490506174951195 0.751569833743069 0.1970107 0.33952552 prediction 0.503139667486138 Functional Gain - JDP2 ENSG00000140044 UTR5 Human protein_coding chr14:75894941 chr14:75894945 . . 0 25 hm5C_associated_SNPs_108064 0 0 1 DDX3X POSTAR2 ENCODE chr14:75894773-75894958
64251 chr15 22940792 22940792 1 + C T OV 22940791 + 22940771 22940811 41 TGCGAGCAGATGATCCAGATCCGCGAGGACCACATGCGCTT TGCGAGCAGATGATCCAGATCTGCGAGGACCACATGCGCTT < 41bp 0.502287604260402 0.753849749668484 0.85030305 0.79915583 prediction 0.503124290816165 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22940791 chr15:22940792 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_108065 0 0 3 DDX24 POSTAR2 ENCODE chr15:22940791-22940841
64251 chr19 47880446 47880446 1 + C T rs187504350 47880445 + 47880425 47880465 41 CCGTACCTGGTGAACTGCGTCCGCATCCCTGCCCTCCAGGT CCGTACCTGGTGAACTGCGTCTGCATCCCTGCCCTCCAGGT < 41bp 0.492618383463191 0.751545033155445 0.21820709 0.2607977 prediction 0.503090066310889 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47880445 chr19:47880446 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_108067 0 0 5 PPIG POSTAR2 ENCODE chr19:47880400-47880462
64251 chr16 20838466 20838466 1 + C A LGG 20838465 + 20838445 20838485 41 AGTTAAAAGCACTGCTTCCTCCTGATGCTGTGTTAGTGGGC AGTTAAAAGCACTGCTTCCTCATGATGCTGTGTTAGTGGGC < 41bp 0.518512077724496 0.770049645320515 0.11234513 0.1818594 prediction 0.503075135192038 Functional Gain - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20838465 chr16:20838466 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_108069 0 0 1 DDX24 POSTAR2 ENCODE chr16:20838428-20838489
64251 chr22 29445508 29445508 1 + C T UCEC 29445507 + 29445487 29445527 41 TACTCCCCAGCCCACCCCTTCCGCAGGCCCAAGTTGAGTGG TACTCCCCAGCCCACCCCTTCTGCAGGCCCAAGTTGAGTGG < 41bp 0.532460918284179 0.783990463037365 0.13598844 0.22183567 prediction 0.503059089506372 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445507 chr22:29445508 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108071 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29445477-29445509
64251 chr4 7055826 7055826 1 + C T SKCM 7055825 + 7055805 7055845 41 ACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCAT ACGTTGGTGCTTCCCGGACTCTCCAAGAGGTGATGGAGCAT < 41bp 0.494081982203575 0.751519979352226 0.15500611 0.9666296 prediction 0.503039958704451 Functional Gain - TADA2B ENSG00000173011 CDS Human protein_coding chr4:7055825 chr4:7055826 nonsynonymous SNV 0.735 2 22 hm5C_associated_SNPs_108073 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:7055798-7055842
64251 chr15 69747556 69747556 1 + C G rs78395337 69747555 + 69747535 69747575 41 CCTCATCTGCAATGTAGGGGCCGGTGGACCTGCTCCAGCAG CCTCATCTGCAATGTAGGGGCGGGTGGACCTGCTCCAGCAG < 41bp 0.614029678367405 0.865545888312261 0.8597373 0.8893248 prediction 0.503032419889712 Functional Gain - RPLP1 ENSG00000137818 CDS Human protein_coding chr15:69747555 chr15:69747556 synonymous SNV . 0 22 hm5C_associated_SNPs_108074 0 0 69 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:69747500-69747580
64251 chr16 69375484 69375484 1 + C T OV 69375483 + 69375463 69375503 41 CAAGACTGCAGAAAAGTAGACCCCATGGCGATTGTGGTATT CAAGACTGCAGAAAAGTAGACTCCATGGCGATTGTGGTATT < 41bp 0.50269268548636 0.754192343549216 0.12111947 0.9298459 prediction 0.502999316125712 Functional Gain - NIP7 ENSG00000132603 CDS Human protein_coding chr16:69375483 chr16:69375484 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_108075 0 0 1 SND1 POSTAR2 ENCODE chr16:69375475-69375554
64251 chr7 27868376 27868376 1 + T G UCEC 27868374 + 27868354 27868394 41 TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTG TGTGCAGCGAGCAGTTCCCTCCGGACTATGACCAGCAGGTG < 41bp 0.430398330069924 0.751479373831442 0.040960193 0.41183975 prediction 0.502958747662884 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27868374 chr7:27868376 synonymous SNV . 0 23 hm5C_associated_SNPs_108080 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:27868352-27868377
64251 chr16 89661901 89661901 1 + T A BLCA 89661897 + 89661877 89661917 41 ATCGTGGGCGTGGGCAACGCCGACTTCACCGACATGCAGGT ATCGTGGGCGTGGGCAACGCCGACATCACCGACATGCAGGT < 41bp 0.420920816737736 0.751463739749216 0.08801326 0.1331132 prediction 0.502927479498432 Functional Gain - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89661897 chr16:89661901 nonsynonymous SNV 0.966 4 25 hm5C_associated_SNPs_108081 0 0 1 RBM15 POSTAR2 ENCODE chr16:89661843-89661912
64251 chr6 43106668 43106668 1 + C A UCEC 43106664 + 43106644 43106684 41 GCTACTTGGATTGCCTGACCCAGGCCACACCAAAACCTACA GCTACTTGGATTGCCTGACCCAGGACACACCAAAACCTACA < 41bp 0.342864686584861 0.751456379721667 0.51147425 0.4073432 prediction 0.502912759443334 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43106664 chr6:43106668 nonsynonymous SNV 0.989 4 25 hm5C_associated_SNPs_108082 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43106660-43106698
64251 chr19 13868275 13868275 1 + C T SKCM 13868274 + 13868254 13868294 41 TGGTGCGATGGCTGCAAGAACCACATCGGCATGGGTGAGCC TGGTGCGATGGCTGCAAGAACTACATCGGCATGGGTGAGCC < 41bp 0.525786921190616 0.777242780515685 0.07022998 0.8256378 prediction 0.502911718650138 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13868274 chr19:13868275 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108083 0 0 1 DDX24 POSTAR2 ENCODE chr19:13868241-13868288
64251 chr7 100732085 100732085 1 + C T SKCM 100732084 + 100732064 100732104 41 CCCATCTTTTACTGCAGTTTCCCCACGCGGATGCCTGGAGA CCCATCTTTTACTGCAGTTTCTCCACGCGGATGCCTGGAGA < 41bp 0.489448509597416 0.751433598025294 0.20504934 0.94767034 prediction 0.502867196050588 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732084 chr7:100732085 nonsynonymous SNV 0.965 1 22 hm5C_associated_SNPs_108087 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:100732078-100732105
64251 chr19 34832424 34832424 1 + T C COAD 34832422 + 34832402 34832442 41 TTCTGGAAATGGAAACAAATCTTCAGGTGGCCTGCAGAAGA TTCTGGAAATGGAAACAAATCTCCAGGTGGCCTGCAGAAGA < 41bp 0.457442316086876 0.751400989209297 0.8012124 0.9621738 prediction 0.502801978418595 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832422 chr19:34832424 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_108092 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr19:34832413-34832435
64251 chr20 31606541 31606541 1 + C A ESCA 31606540 + 31606520 31606560 41 TACCGAGGGCTCCATGGCCACCGTGGGCCTCTCCCAGCAGC TACCGAGGGCTCCATGGCCACAGTGGGCCTCTCCCAGCAGC < 41bp 0.484698973991558 0.751396631137277 0.40783286 0.6473112 prediction 0.502793262274553 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31606540 chr20:31606541 synonymous SNV . 0 22 hm5C_associated_SNPs_108093 0 0 1 RPS3 POSTAR2 ENCODE chr20:31606509-31606547
64251 chr1 15541680 15541680 1 + C A PAAD 15541679 + 15541659 15541699 41 GTGATCATGGCCATGTGGAACCTGGTACCCGGCTTCAGCGC GTGATCATGGCCATGTGGAACATGGTACCCGGCTTCAGCGC < 41bp 0.499612525841419 0.75139302565131 0.31578925 0.42235404 prediction 0.50278605130262 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15541679 chr1:15541680 nonsynonymous SNV 0.949 4 22 hm5C_associated_SNPs_108094 0 0 3 DDX3X POSTAR2 ENCODE chr1:15541657-15541727
64251 chr20 25656657 25656657 1 - G T LIHC 25656658 - 25656638 25656678 41 AAGTCAACTCTTGTCTACCACCAGAGAACACACTCAGGGGA AAGTCAACTCTTGTCTACCACAAGAGAACACACTCAGGGGA < 41bp 0.524309735863239 0.775686863668221 0.41129193 0.5394956 prediction 0.502754255609965 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656658 chr20:25656657 nonsynonymous SNV 0.110 2 22 hm5C_associated_SNPs_108096 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:25656640-25656660
64251 chr22 35796450 35796450 1 + C G BLCA 35796446 + 35796426 35796466 41 GCAGTCATGTCGGGATTCGACGATCCTGGCATTTTCTACAG GCAGTCATGTCGGGATTCGACGATGCTGGCATTTTCTACAG < 41bp 0.464185266681557 0.751373355277558 0.4273547 0.65721506 prediction 0.502746710555115 Functional Gain - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35796446 chr22:35796450 nonsynonymous SNV 0.979 1 25 hm5C_associated_SNPs_108099 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:35796431-35796473
64251 chr12 57485593 57485593 1 + C T SKCM 57485592 + 57485572 57485612 41 GAGAGGATCTTCCGGAGCTTCCCAAGGGGGGATGCTGGGGA GAGAGGATCTTCCGGAGCTTCTCAAGGGGGGATGCTGGGGA < 41bp 0.537169022341581 0.788515593362172 0.40444967 0.60014313 prediction 0.502693142041184 Functional Gain - NAB2 ENSG00000166886 CDS Human protein_coding chr12:57485592 chr12:57485593 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_108102 0 0 4 EFTUD2 POSTAR2 ENCODE chr12:57485583-57485616
64251 chr15 81294022 81294022 1 + C G rs190004178 81294021 + 81294001 81294041 41 GCCGCCGTCGCGGGGAAGTGCCGCCTGGTGGGGTCACGGCG GCCGCCGTCGCGGGGAAGTGCGGCCTGGTGGGGTCACGGCG < 41bp 0.488306111939801 0.751344604586307 0.9022683 0.9116787 prediction 0.502689209172615 Functional Gain - TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81294021 chr15:81294022 . . 0 22 hm5C_associated_SNPs_108103 0 0 1 DDX3X POSTAR2 ENCODE chr15:81294013-81294060
64251 chr19 42795782 42795782 1 + T A ACC 42795778 + 42795758 42795798 41 AGCTGCTGCCTGGGAAGGTCCTAGTGCCTCTGGCCGCCCCT AGCTGCTGCCTGGGAAGGTCCTAGAGCCTCTGGCCGCCCCT < 41bp 0.608623363378834 0.859892834670125 0.47993132 0.73902845 prediction 0.502538942582582 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42795778 chr19:42795782 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_108113 0 0 1 GEMIN5 POSTAR2 ENCODE chr19:42795709-42795782
64251 chr8 145247317 145247317 1 + C G rs373072073 145247313 + 145247293 145247333 41 CTGCACTCCCAGGTAGGAGGCGGGCGTCAGGGGGCGGGTCC CTGCACTCCCAGGTAGGAGGCGGGGGTCAGGGGGCGGGTCC < 41bp 0.45553056758284 0.7512690375591 0.92772305 0.94054615 prediction 0.5025380751182 Functional Gain - MROH1 ENSG00000179832 intronic Human protein_coding chr8:145247313 chr8:145247317 . . 0 25 hm5C_associated_SNPs_108115 0 0 2 PRPF8 POSTAR2 ENCODE chr8:145247294-145247351
64251 chr12 133287459 133287459 1 + C A rs7486453 133287455 + 133287435 133287475 41 TGCGCGGGCCGGCGCGGGAGCAAGCGGCATGGCGTTCCGGC TGCGCGGGCCGGCGCGGGAGCAAGAGGCATGGCGTTCCGGC < 41bp 0.616687981357856 0.867951532417652 0.882639 0.90764034 prediction 0.502527102119592 Functional Gain - PGAM5 ENSG00000247077 UTR5 Human protein_coding chr12:133287455 chr12:133287459 . . 0 25 hm5C_associated_SNPs_108119 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819215 chr12:133287440-133287460
64251 chr17 80685602 80685602 1 + C G rs57335410 80685598 + 80685578 80685618 41 TCCTGCATGATCCCTGGGCCCTCCCGCAGGCTGAGCAAGTC TCCTGCATGATCCCTGGGCCCTCCGGCAGGCTGAGCAAGTC < 41bp 0.487450769319675 0.751246052800109 0.00483498 0.0391784 prediction 0.502492105600219 Functional Gain - FN3KRP ENSG00000141560 UTR3 Human protein_coding chr17:80685598 chr17:80685602 . . 0 25 hm5C_associated_SNPs_108125 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:80685566-80685603
64251 chr11 124502023 124502023 1 + C A UCEC 124502019 + 124501999 124502039 41 CCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACC CCTCCCAGAGCTTCAGCCTGCAGCATTTGTGTCTTCTTACC < 41bp 0.349763984587218 0.751223503411559 0.16550657 0.26132 prediction 0.502447006823118 Functional Gain - TBRG1 ENSG00000154144 CDS Human protein_coding chr11:124502019 chr11:124502023 synonymous SNV . 0 25 hm5C_associated_SNPs_108130 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:124502012-124502046
64251 chr7 5336621 5336621 1 + C G LIHC 5336620 + 5336600 5336640 41 TCCTCACGAAGCTGCTGCTGCCCGACGAGCGCGCCAGCACG TCCTCACGAAGCTGCTGCTGCGCGACGAGCGCGCCAGCACG < 41bp 0.605354287608263 0.856577084807291 0.17243236 0.2779864 prediction 0.502445594398056 Functional Gain - SLC29A4 ENSG00000164638 CDS Human protein_coding chr7:5336620 chr7:5336621 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_108131 0 0 1 PPIG POSTAR2 ENCODE chr7:5336581-5336632
64251 chr6 34738120 34738120 1 + C T SKCM 34738119 + 34738099 34738139 41 ACCCCATATGGGGGGCCCTCCCATGATGCCAATGATGGGCC ACCCCATATGGGGGGCCCTCCTATGATGCCAATGATGGGCC < 41bp 0.512370203089029 0.763581344205099 0.36790246 0.31085604 prediction 0.502422282232139 Functional Gain - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34738119 chr6:34738120 synonymous SNV . 0 22 hm5C_associated_SNPs_108135 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:34738091-34738131
64251 chr10 12203088 12203088 1 + T C STAD 12203086 + 12203066 12203106 41 ATGTGCATTCTTCTCTAAGACATGGATTGAAGTGTCTGGTT ATGTGCATTCTTCTCTAAGACACGGATTGAAGTGTCTGGTT < 41bp 0.481395416100621 0.75118672504939 0.01695028 0.010368466 prediction 0.502373450098781 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12203086 chr10:12203088 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_108141 0 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:12203063-12203094
64251 chr16 67913992 67913992 1 + C T SKCM 67913991 + 67913971 67914011 41 CTGAGGAGCTGACCTTGAGCCCCAAGCTGCAGCTGGATGGC CTGAGGAGCTGACCTTGAGCCTCAAGCTGCAGCTGGATGGC < 41bp 0.52646603674782 0.777650057314265 0.0643616 0.14258888 prediction 0.502368041132889 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913991 chr16:67913992 nonsynonymous SNV 0.983 3 22 hm5C_associated_SNPs_108142 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:67913980-67914000
64251 chr17 41004801 41004801 1 + C T SKCM 41004800 + 41004780 41004820 41 GTGTGGGATACGGTCTTCCACCCCAGTGGGGCCATAGAAAT GTGTGGGATACGGTCTTCCACTCCAGTGGGGCCATAGAAAT < 41bp 0.513687586282289 0.764867735742833 0.046421766 0.9278176 prediction 0.502360298921087 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41004800 chr17:41004801 nonsynonymous SNV 0.991 0 22 hm5C_associated_SNPs_108146 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:41004771-41004812
64251 chr9 91963110 91963110 1 + C A THCA 91963109 + 91963089 91963129 41 TGGTGGTGATGACCAGTTTCCCGAGCAGGCAGAGCTGTCAG TGGTGGTGATGACCAGTTTCCAGAGCAGGCAGAGCTGTCAG < 41bp 0.522590638862703 0.773763553196328 0.48815513 0.9010569 prediction 0.50234582866725 Functional Gain - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91963109 chr9:91963110 synonymous SNV . 0 22 hm5C_associated_SNPs_108148 0 0 6 BUD13 POSTAR2 ENCODE chr9:91963075-91963140
64251 chr9 138395500 138395500 1 + C T COAD 138395499 + 138395479 138395519 41 TTCACCGCCCACATGGCCTACCGCAAGGGCATCATCTTGTT TTCACCGCCCACATGGCCTACTGCAAGGGCATCATCTTGTT < 41bp 0.51201794089714 0.763181172724374 0.01837939 0.09944907 prediction 0.502326463654468 Functional Gain - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395499 chr9:138395500 nonsynonymous SNV 0.957 4 22 hm5C_associated_SNPs_108150 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:138395440-138395520
64251 chr16 89784192 89784192 1 + C G rs534653422 89784188 + 89784168 89784208 41 AATCTTGGAGCGCCAGAGCTCAGCCGAGCTCACCGGCTCCC AATCTTGGAGCGCCAGAGCTCAGCGGAGCTCACCGGCTCCC < 41bp 0.580298839390915 0.831458478105321 0.7538034 0.9079946 prediction 0.502319277428812 Functional Gain - VPS9D1-AS1 ENSG00000261373 ncRNA_exonic Human antisense chr16:89784188 chr16:89784192 . . 0 25 hm5C_associated_SNPs_108152 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:89784167-89784339
64251 chr22 31829985 31829985 1 + C G rs374964620 31829981 + 31829961 31830001 41 CTTTCCCTTTTCCCATCTGCCGGACGAACCACAACAGCGTT CTTTCCCTTTTCCCATCTGCCGGAGGAACCACAACAGCGTT < 41bp 0.585445349466149 0.836602385899172 0.60506994 0.92156506 prediction 0.502314072866046 Functional Gain - DRG1 ENSG00000185721 UTR3 Human protein_coding chr22:31829981 chr22:31829985 . . 0 25 hm5C_associated_SNPs_108154 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:31829949-31830053
64251 chr4 56236098 56236098 1 + T C SKCM 56236096 + 56236076 56236116 41 GAGCTGATGATCTACGTTTCCATGGCCGTCACCTTTGGGTT GAGCTGATGATCTACGTTTCCACGGCCGTCACCTTTGGGTT < 41bp 0.538903294217767 0.790059025970018 0.61193985 0.5515719 prediction 0.502311463504501 Functional Gain - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56236096 chr4:56236098 nonsynonymous SNV 0.849 2 23 hm5C_associated_SNPs_108155 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:56236097-56236123
64251 chr20 37634873 37634873 1 + C A UCS 37634872 + 37634852 37634892 41 GACTGTGGCTTTGTGAAACTCCGAGCCTACAATCCCAGGAC GACTGTGGCTTTGTGAAACTCAGAGCCTACAATCCCAGGAC < 41bp 0.518518543555846 0.769646698273495 0.33501843 0.654546 prediction 0.502256309435298 Functional Gain - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37634872 chr20:37634873 synonymous SNV . 0 22 hm5C_associated_SNPs_108161 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:37634866-37634889
64251 chr17 78196524 78196524 1 + T G KIRC 78196521 + 78196501 78196541 41 GGGCACCTCCCGGGATGTGACTCTGGGCCCCACCGCCATTA GGGCACCTCCCGGGATGTGACTCGGGGCCCCACCGCCATTA < 41bp 0.665900945631264 0.917022754572155 0.29332185 0.7878685 prediction 0.502243617881781 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78196521 chr17:78196524 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_108163 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:78196489-78196527
64251 chr2 112725805 112725805 1 + C T LUSC 112725804 + 112725784 112725824 41 TCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCA TCCTGGTTTTGATGGATACTCTCCGTTCAGGAATTGCAGCA < 41bp 0.496738492451931 0.751092637932912 0.044419795 0.082007945 prediction 0.502185275865825 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112725804 chr2:112725805 synonymous SNV . 0 22 hm5C_associated_SNPs_108166 0 0 2 GRWD1 POSTAR2 ENCODE chr2:112725790-112725826
64251 chr16 67006828 67006828 1 + C A LIHC 67006827 + 67006807 67006847 41 AACAATATCTGGAGATCAACCCAGTGCCACGGGCCGGACAG AACAATATCTGGAGATCAACCAAGTGCCACGGGCCGGACAG < 41bp 0.491242123855116 0.751088297037781 0.7090554 0.73248154 prediction 0.502176594075562 Functional Gain - CES3 ENSG00000172828 CDS Human protein_coding chr16:67006827 chr16:67006828 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_108167 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:67006791-67006829
64251 chr20 306756 306756 1 + C G PRAD 306755 + 306735 306775 41 GGAAGATCATGGACCAGTGGCCCGACATGCACAACGCCGAG GGAAGATCATGGACCAGTGGCGCGACATGCACAACGCCGAG < 41bp 0.603213986512809 0.854287694939839 0.28958714 0.41215235 prediction 0.50214741685406 Functional Gain - SOX12 ENSG00000177732 CDS Human protein_coding chr20:306755 chr20:306756 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_108170 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:306728-306757
64251 chr6 7568069 7568069 1 + T C COAD 7568067 + 7568047 7568087 41 CTGAAGGGGCTCCAGGACTCCATCAGGAAGAAGTACCCCTG CTGAAGGGGCTCCAGGACTCCACCAGGAAGAAGTACCCCTG < 41bp 0.459577732043814 0.751064204888022 0.1008732 0.19276878 prediction 0.502128409776044 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7568067 chr6:7568069 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_108172 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:7568042-7568080
64251 chr22 41527608 41527608 1 + C T SKCM 41527607 + 41527587 41527627 41 ATCAGCAGCCTGGGCAGTCTCCCCAAGGCATGCGGCCCATG ATCAGCAGCCTGGGCAGTCTCTCCAAGGCATGCGGCCCATG < 41bp 0.556308713559396 0.807358868168791 0.09594473 0.9616643 prediction 0.502100309218791 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41527607 chr22:41527608 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_108174 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:41527603-41527627
64251 chr19 50909490 50909490 1 + C A UCEC 50909489 + 50909469 50909509 41 GCCGGCCTTTGCTCCAACATCCGGGACTCTTCATTCCAGTC GCCGGCCTTTGCTCCAACATCAGGGACTCTTCATTCCAGTC < 41bp 0.486255332012095 0.751047706039604 0.35304207 0.871279 prediction 0.502095412079208 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50909489 chr19:50909490 synonymous SNV . 0 22 hm5C_associated_SNPs_108175 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:50909479-50909507
64251 chr19 41889820 41889820 1 + C G rs536286607 41889816 + 41889796 41889836 41 ACTGTGAACCCTGAGGCCGGCAGCCCAGCAAATCTGTGGGC ACTGTGAACCCTGAGGCCGGCAGCGCAGCAAATCTGTGGGC < 41bp 0.511167604281199 0.762201752026532 0.5749143 0.5694078 prediction 0.502068295490667 Functional Gain - TMEM91 ENSG00000142046 UTR3 Human protein_coding chr19:41889816 chr19:41889820 . . 0 25 hm5C_associated_SNPs_108177 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:41889788-41889822
64251 chr1 150477121 150477121 1 + C A UCEC 150477120 + 150477100 150477140 41 CTTTCAAGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTCAT CTTTCAAGGCAGGCGGGTGCCATGGAGCGTCCAGTCCTCAT < 41bp 0.508800686449449 0.759800853028357 0.14909351 0.38106713 prediction 0.502000333157817 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150477120 chr1:150477121 nonsynonymous SNV 0.186 0 22 hm5C_associated_SNPs_108181 0 0 1 U2AF2 POSTAR2 ENCODE chr1:150477092-150477150
64251 chr16 30770515 30770515 1 + C G UCEC 30770511 + 30770491 30770531 41 TCCCTTACCCGTCTCACTCTCTGGCCACAGTTTGGGTGGCT TCCCTTACCCGTCTCACTCTCTGGGCACAGTTTGGGTGGCT < 41bp 0.465085887990556 0.75099521444525 0.84587944 0.9233123 prediction 0.501990428890499 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30770511 chr16:30770515 nonsynonymous SNV 0.920 2 25 hm5C_associated_SNPs_108182 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:30770494-30770526
64251 chr2 86718161 86718161 1 + C A THCA 86718160 + 86718140 86718180 41 TTGGGGATGTGGTGTTTATCCCGGCAGGAGCTCCACATCAG TTGGGGATGTGGTGTTTATCCAGGCAGGAGCTCCACATCAG < 41bp 0.508107527343586 0.759081719654195 0.91075385 0.91371894 prediction 0.501948384621217 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86718160 chr2:86718161 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_108186 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:86718145-86718180
64251 chrX 129059059 129059059 1 + C G BLCA 129059055 + 129059035 129059075 41 CAGAGAGGACCCCAAATAATCGCCCTGATGCCCCTAAGGAG CAGAGAGGACCCCAAATAATCGCCGTGATGCCCCTAAGGAG < 41bp 0.580688530288824 0.831659572186022 0.7121699 0.6943137 prediction 0.501942083794396 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129059055 chrX:129059059 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_108188 0 0 2 UCHL5 POSTAR2 ENCODE chrX:129059047-129059123
64251 chr19 18305894 18305894 1 + C A THCA 18305893 + 18305873 18305913 41 TACCTGTCCTACTTGAAGTACCGGGTGAGTGTGGAGGGCAT TACCTGTCCTACTTGAAGTACAGGGTGAGTGTGGAGGGCAT < 41bp 0.521684434466455 0.772624123200879 0.5309118 0.36753553 prediction 0.501879377468847 Functional Gain - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18305893 chr19:18305894 synonymous SNV . 0 22 hm5C_associated_SNPs_108194 0 0 1 PRPF8 POSTAR2 ENCODE chr19:18305886-18305937
64251 chr13 24242166 24242166 1 + C T rs35041805 24242165 + 24242145 24242185 41 TGCTGTGAGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGG TGCTGTGAGGAGGCCTGCAGCTCCAACCCGGCGACTCTTGG < 41bp 0.556806286822923 0.807745253854486 0.35927376 0.9129635 prediction 0.501877934063126 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242165 chr13:24242166 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_108195 0 0 4 RPS3 POSTAR2 ENCODE chr13:24242116-24242184
64251 chr22 37964344 37964344 1 + C T LUAD 37964343 + 37964323 37964363 41 TCCAGCCCCCGCTGCAAACCCCCCAGCCCCTACTGCAAACC TCCAGCCCCCGCTGCAAACCCTCCAGCCCCTACTGCAAACC < 41bp 0.512343328233051 0.763281783015539 0.13355139 0.9405483 prediction 0.501876909564974 Functional Gain - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964343 chr22:37964344 synonymous SNV . 0 22 hm5C_associated_SNPs_108197 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37964320-37964400
64251 chr19 35760579 35760579 1 + C T UCEC 35760578 + 35760558 35760598 41 CACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGG CACAACATCCAGTACCAGTTCTGCACAGAGACAAATGGAGG < 41bp 0.502293882428547 0.753228220270909 0.23133183 0.38687956 prediction 0.501868675684723 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35760578 chr19:35760579 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_108199 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:35760550-35760595
64251 chr12 32137852 32137852 1 + C G rs3759297 32137851 + 32137831 32137871 41 TGAACAAGCTTCTCAGGAAACCCGACAGAAGAAACATGTAA TGAACAAGCTTCTCAGGAAACGCGACAGAAGAAACATGTAA < 41bp 0.511790087550656 0.762719596916423 0.13793012 0.12561762 prediction 0.501859018731534 Functional Gain - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32137851 chr12:32137852 synonymous SNV . 0 22 hm5C_associated_SNPs_108200 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:32137836-32137877
64251 chr22 29445697 29445697 1 + C T SKCM 29445696 + 29445676 29445716 41 GGCAGTGGCAGCCTGCTCTTCCCCACCGTGGTGCACGTGGC GGCAGTGGCAGCCTGCTCTTCTCCACCGTGGTGCACGTGGC < 41bp 0.53103478607722 0.781963426713022 0.17372894 0.95231897 prediction 0.501857281271605 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445696 chr22:29445697 nonsynonymous SNV 0.907 2 22 hm5C_associated_SNPs_108201 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:29445696-29445697
64251 chr2 27245168 27245168 1 + C A UCEC 27245164 + 27245144 27245184 41 ATGCTTGCATGGGTCAACGACTCCCTGCACCTCAACTATAC ATGCTTGCATGGGTCAACGACTCCATGCACCTCAACTATAC < 41bp 0.307448566613866 0.750924588545823 0.27043417 0.9642017 prediction 0.501849177091646 Functional Gain - MAPRE3 ENSG00000084764 CDS Human protein_coding chr2:27245164 chr2:27245168 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_108205 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:27245146-27245176
64251 chr5 41904484 41904484 1 + C G HNSC 41904480 + 41904460 41904500 41 GATTGTGGCCATGGCGGCCGCAGTCTCTAGTGTGGTGAGAC GATTGTGGCCATGGCGGCCGCAGTGTCTAGTGTGGTGAGAC < 41bp 0.487368940417863 0.750909746141356 0.41860843 0.41141564 prediction 0.501819492282712 Functional Gain - C5orf51 ENSG00000205765 CDS Human protein_coding chr5:41904480 chr5:41904484 synonymous SNV . 0 25 hm5C_associated_SNPs_108209 0 0 11 TARDBP POSTAR2 DRA001158,DRS012386 chr5:41904473-41904495
64251 chr2 176982041 176982041 1 + C A LUAD 176982040 + 176982020 176982060 41 ACTGAGTCAGACCTACGCCACCGGGAAAACCCAAGAGTACA ACTGAGTCAGACCTACGCCACAGGGAAAACCCAAGAGTACA < 41bp 0.511242994636863 0.762148152878116 0.3863699 0.8095014 prediction 0.501810316482505 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176982040 chr2:176982041 synonymous SNV . 0 22 hm5C_associated_SNPs_108211 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176981879-176982059
64251 chr16 19127325 19127325 1 + C A OV 19127321 + 19127301 19127341 41 TCTCCGGGCCTACGGGGGTCCCCGCTACCTTGCCAGGTGCC TCTCCGGGCCTACGGGGGTCCCCGATACCTTGCCAGGTGCC < 41bp 0.358905351538605 0.750893788220366 0.17556006 0.35290706 prediction 0.501787576440732 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19127321 chr16:19127325 synonymous SNV . 0 25 hm5C_associated_SNPs_108216 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr16:19127320-19127340
64251 chr9 100840602 100840602 1 + T C STAD 100840600 + 100840580 100840620 41 CCAGCGCATACCCGCTCCAGCCTGAGGACGTCAACCTGCGG CCAGCGCATACCCGCTCCAGCCCGAGGACGTCAACCTGCGG < 41bp 0.505587423839005 0.756462547667408 0.4247873 0.3900537 prediction 0.501750247656804 Functional Gain - NANS ENSG00000095380 CDS Human protein_coding chr9:100840600 chr9:100840602 synonymous SNV . 0 23 hm5C_associated_SNPs_108222 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:100840585-100840602
64251 chr15 41865552 41865552 1 + C A THCA 41865551 + 41865531 41865571 41 GTGGCTGACTTCGGACTCTCCCGGAAGATCTACAGTGGGGA GTGGCTGACTTCGGACTCTCCAGGAAGATCTACAGTGGGGA < 41bp 0.522870669112915 0.773743478221528 0.81363213 0.49050623 prediction 0.501745618217225 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41865551 chr15:41865552 synonymous SNV . 0 22 hm5C_associated_SNPs_108223 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr15:41865529-41865552
64251 chr19 40480725 40480725 1 + T C BLCA 40480723 + 40480703 40480743 41 TGTTGGCAAAGGCGGTGGCACATCACACAACAGGTGAGCCC TGTTGGCAAAGGCGGTGGCACACCACACAACAGGTGAGCCC < 41bp 0.55100673707177 0.801877369285554 0.89509046 0.85010976 prediction 0.501741264427568 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480723 chr19:40480725 synonymous SNV . 0 23 hm5C_associated_SNPs_108225 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:40480697-40480731
64251 chr7 143079980 143079980 1 + C G THYM 143079976 + 143079956 143079996 41 GCCTGCAGCCGGGGGCACAGCACCCCTGCCTCCTTGGAAGT GCCTGCAGCCGGGGGCACAGCACCGCTGCCTCCTTGGAAGT < 41bp 0.454708631376005 0.75084019734746 0.17501462 0.20439881 prediction 0.50168039469492 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143079976 chr7:143079980 synonymous SNV . 0 25 hm5C_associated_SNPs_108226 0 0 3 IGF2BP1 POSTAR2 ENCODE chr7:143079896-143079996
64251 chr12 53453445 53453445 1 + C A UCEC 53453444 + 53453424 53453464 41 GGCTACCGCGCCCCAGGCTACCGGGAGGTGGTCATCCTGGA GGCTACCGCGCCCCAGGCTACAGGGAGGTGGTCATCCTGGA < 41bp 0.51708237024162 0.767879639439648 0.9099536 0.880939 prediction 0.501594538396056 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453444 chr12:53453445 synonymous SNV . 0 22 hm5C_associated_SNPs_108234 0 0 6 EFTUD2 POSTAR2 ENCODE chr12:53453436-53453511
64251 chr19 11024627 11024627 1 + C A GBM 11024626 + 11024606 11024646 41 GGTGGAGGAGGTGTCACTCCCCGAGCAGGTGGACATCATCA GGTGGAGGAGGTGTCACTCCCAGAGCAGGTGGACATCATCA < 41bp 0.502249302822852 0.753031377152167 0.4704883 0.89210826 prediction 0.50156414865863 Functional Gain - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024626 chr19:11024627 synonymous SNV . 0 22 hm5C_associated_SNPs_108237 0 0 3 BUD13 POSTAR2 ENCODE chr19:11024600-11024650
64251 chr1 171761229 171761229 1 + C T SKCM 171761228 + 171761208 171761248 41 TCTTTGTCCACGATCATTTTCCAAAGTCCTGCATTGATGCT TCTTTGTCCACGATCATTTTCTAAAGTCCTGCATTGATGCT < 41bp 0.497725230696186 0.750765921041122 0.8925916 0.25262746 prediction 0.501531842082243 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171761228 chr1:171761229 nonsynonymous SNV 0.894 1 22 hm5C_associated_SNPs_108241 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:171761213-171761233
64251 chr3 127396057 127396057 1 + C T SARC 127396056 + 127396036 127396076 41 GAAGGTGCTGACCATCGAGCCCCCACCTGCAGACCCCCGCC GAAGGTGCTGACCATCGAGCCTCCACCTGCAGACCCCCGCC < 41bp 0.535823144260355 0.786576351632654 0.096200675 0.9340291 prediction 0.501506414744597 Functional Gain - ABTB1 ENSG00000114626 CDS Human protein_coding chr3:127396056 chr3:127396057 synonymous SNV . 0 22 hm5C_associated_SNPs_108243 0 0 1 PPIG POSTAR2 ENCODE chr3:127396042-127396129
64251 chr6 30037008 30037008 1 + C G GBM 30037004 + 30036984 30037024 41 CCGCAAAGGACGGCGTCGTGCAACCCTAGGACCGACCCCCA CCGCAAAGGACGGCGTCGTGCAACGCTAGGACCGACCCCCA < 41bp 0.497803944103782 0.750736771398176 0.068674356 0.1336141 prediction 0.501473542796352 Functional Gain - PPP1R11 ENSG00000204619 CDS Human protein_coding chr6:30037004 chr6:30037008 synonymous SNV . 0 25 hm5C_associated_SNPs_108250 0 0 1 HNRNPK POSTAR2 ENCODE chr6:30037008-30037121
64251 chr19 17837806 17837806 1 + C A rs7252905 17837802 + 17837782 17837822 41 AACCGAGTGTCTCCCGGACCCAGCCGCGGGAGGTGCGCCGG AACCGAGTGTCTCCCGGACCCAGCAGCGGGAGGTGCGCCGG < 41bp 0.672996452970412 0.923731816251318 0.35630834 0.7305317 prediction 0.501470726561812 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837802 chr19:17837806 nonsynonymous SNV 0.459 3 25 hm5C_associated_SNPs_108252 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:17837805-17837806
64251 chr6 42992825 42992825 1 + C G rs3749903 42992821 + 42992801 42992841 41 CTGGAAATAGTCCTAAGAAACAAGCTTCTAGACCACCTATC CTGGAAATAGTCCTAAGAAACAAGGTTCTAGACCACCTATC < 41bp 0.563519678723414 0.814253365942422 0.3433732 0.8048114 prediction 0.501467374438015 Functional Gain - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42992821 chr6:42992825 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_108253 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42992728-42992862
64251 chr13 24234610 24234610 1 + T C UCEC 24234608 + 24234588 24234628 41 GAGCCTGCTGCCAGTGCCGCCGTGACTCAGTGCAGACCTGC GAGCCTGCTGCCAGTGCCGCCGCGACTCAGTGCAGACCTGC < 41bp 0.56055611484275 0.811288947630972 0.12116173 0.16790974 prediction 0.501465665576444 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24234608 chr13:24234610 synonymous SNV . 0 23 hm5C_associated_SNPs_108255 0 0 5 DDX6 POSTAR2 ENCODE chr13:24234580-24234627
64251 chr22 21363642 21363642 1 - A C BRCA 21363645 - 21363625 21363665 41 TCTGCTCATGAAGCGGCTCTCGGTGGACTACGGGAAGAAGT TCTGCTCATGAAGCGGCTCTCGGGGGACTACGGGAAGAAGT < 41bp 0.653702587715819 0.904433691141501 0.90005195 0.9555489 prediction 0.501462206851363 Functional Gain - THAP7-AS1;TUBA3FP ENSG00000161149;ENSG00000230513 ncRNA_exonic Human other chr22:21363645 chr22:21363642 . . 0 24 hm5C_associated_SNPs_108256 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:21363640-21363660
64251 chr19 5667104 5667104 1 + C T UCEC 5667103 + 5667083 5667123 41 AGAGCGCCACGGCCGGGACTCCCGCGATGGCTGGGGGGGCT AGAGCGCCACGGCCGGGACTCTCGCGATGGCTGGGGGGGCT < 41bp 0.514042179040019 0.764750030924899 0.39164534 0.18600073 prediction 0.501415703769759 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667103 chr19:5667104 synonymous SNV . 0 22 hm5C_associated_SNPs_108259 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:5666897-5667105
64251 chr15 42057138 42057138 1 + C T PAAD 42057137 + 42057117 42057157 41 CTGCCAACCTTGTGATGACTCCGCAAGGGCAATTGCTCACC CTGCCAACCTTGTGATGACTCTGCAAGGGCAATTGCTCACC < 41bp 0.510572590088764 0.761273360089752 0.043598235 0.34539264 prediction 0.501401540001976 Functional Gain - MGA ENSG00000174197 CDS Human protein_coding chr15:42057137 chr15:42057138 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_108261 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:42057100-42057145
64251 chr7 74005258 74005258 1 + C T STAD 74005257 + 74005237 74005277 41 CTGCCTGATGACATCCCCTTCCGGAACCCCAACACGTACGA CTGCCTGATGACATCCCCTTCTGGAACCCCAACACGTACGA < 41bp 0.534577596006781 0.785257896106648 0.65733564 0.2544334 prediction 0.501360600199735 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:74005257 chr7:74005258 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_108265 0 0 1 GRWD1 POSTAR2 ENCODE chr7:74005252-74005313
64251 chr11 66249785 66249785 1 + C T SKCM 66249784 + 66249764 66249804 41 CCTCTATGCCTACCACCTGTCCCGTGCCGCCTGGTACGGAG CCTCTATGCCTACCACCTGTCTCGTGCCGCCTGGTACGGAG < 41bp 0.516217080741189 0.766893674540311 0.06681004 0.1478549 prediction 0.501353187598244 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66249784 chr11:66249785 synonymous SNV . 0 22 hm5C_associated_SNPs_108266 0 0 2 DDX3X POSTAR2 ENCODE chr11:66249663-66249821
64251 chr17 16285476 16285476 1 + C G KIRP 16285475 + 16285455 16285495 41 GATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGG GATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGG < 41bp 0.612957708417589 0.863633787039418 0.20432737 0.8121319 prediction 0.501352157243659 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285475 chr17:16285476 synonymous SNV . 0 22 hm5C_associated_SNPs_108268 0 0 2 GRWD1 POSTAR2 ENCODE chr17:16285466-16285507
64251 chr8 125487415 125487415 1 + T G MESO 125487412 + 125487392 125487432 41 CCATCAGCAGGTCTGGGCGGCGCTCGAAGTGGCGCTCCGGG CCATCAGCAGGTCTGGGCGGCGCGCGAAGTGGCGCTCCGGG < 41bp 0.373087955352563 0.750671911393202 0.49705863 0.80085707 prediction 0.501343822786405 Functional Gain - RNF139 ENSG00000170881 CDS Human protein_coding chr8:125487412 chr8:125487415 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_108269 0 0 2 DDX3X POSTAR2 ENCODE chr8:125487398-125487432
64251 chr11 65294436 65294436 1 + C T SKCM 65294435 + 65294415 65294455 41 CTGACCCCTCCCCTACAGATCCCCAAAACGCTGGTGCCCCA CTGACCCCTCCCCTACAGATCTCCAAAACGCTGGTGCCCCA < 41bp 0.477955315697273 0.750666326595121 0.078632295 0.95723236 prediction 0.501332653190241 Functional Gain - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65294435 chr11:65294436 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_108271 0 0 9 EIF3A POSTAR2 GSE65004,GSM1585665 chr11:65294432-65294461
64251 chr17 18144126 18144126 1 + C A rs575121495 18144122 + 18144102 18144142 41 CCTACGAGGCCTCACGGGACCTGGCGCAGGCACCTGACATG CCTACGAGGCCTCACGGGACCTGGAGCAGGCACCTGACATG < 41bp 0.674307321916239 0.924958516164912 0.27507162 0.8192793 prediction 0.501302388497347 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18144122 chr17:18144126 nonsynonymous SNV 0.917 3 25 hm5C_associated_SNPs_108274 0 0 1 SRSF1 POSTAR2 ENCODE chr17:18143947-18144138
64251 chr6 52269685 52269685 1 + C A rs3180068 52269681 + 52269661 52269701 41 TCTACACCTGGCAGTTTTCTCTGACGTGCTGTTCACTCACA TCTACACCTGGCAGTTTTCTCTGAAGTGCTGTTCACTCACA < 41bp 0.369769341856685 0.750641997653021 0.31614643 0.16057128 prediction 0.501283995306041 Functional Gain - PAQR8 ENSG00000170915 UTR3 Human protein_coding chr6:52269681 chr6:52269685 . . 0 25 hm5C_associated_SNPs_108279 0 0 3 IGF2BP3 POSTAR2 ENCODE chr6:52269652-52269705
64251 chr11 86123497 86123497 1 + C T SKCM 86123496 + 86123476 86123516 41 TCTTAAGCAAGAGGAATATTCCCGGAGTCTCCTGAAACAAA TCTTAAGCAAGAGGAATATTCTCGGAGTCTCCTGAAACAAA < 41bp 0.511279699446096 0.761919219198798 0.68583226 0.4482981 prediction 0.501279039505403 Functional Gain - CCDC81 ENSG00000149201 CDS Human protein_coding chr11:86123496 chr11:86123497 synonymous SNV . 0 22 hm5C_associated_SNPs_108281 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:86123490-86123515
64251 chr12 108959146 108959146 1 + T G UCEC 108959143 + 108959123 108959163 41 TGTGGATGCTAGGTTTAAAACATTTGGCTGTGGTTCCGCAA TGTGGATGCTAGGTTTAAAACATGTGGCTGTGGTTCCGCAA < 41bp 0.360213191382944 0.750634617007116 0.20707363 0.2704798 prediction 0.501269234014233 Functional Gain - ISCU ENSG00000136003 CDS Human protein_coding chr12:108959143 chr12:108959146 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_108283 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:108959120-108959152
64251 chr19 44661740 44661740 1 + C A OV 44661736 + 44661716 44661756 41 AGTGTGGGAAGGTCTTCAGTCAGGCCTCGCATCTTCTAACC AGTGTGGGAAGGTCTTCAGTCAGGACTCGCATCTTCTAACC < 41bp 0.667004927934646 0.917636400203208 0.55862826 0.64103 prediction 0.501262944537124 Functional Gain - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661736 chr19:44661740 nonsynonymous SNV 0.072 1 25 hm5C_associated_SNPs_108285 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:44661734-44661759
64251 chr7 43846646 43846646 1 + T A UCEC 43846642 + 43846622 43846662 41 AGATATTTAAGCTTCCATTTCAAGTCTGGGTCCTTGGAGAA AGATATTTAAGCTTCCATTTCAAGACTGGGTCCTTGGAGAA < 41bp 0.419700404321534 0.750616790164966 0.15197277 0.24026942 prediction 0.501233580329932 Functional Gain - BLVRA ENSG00000106605 CDS Human protein_coding chr7:43846642 chr7:43846646 nonsynonymous SNV 0.993 1 25 hm5C_associated_SNPs_108288 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:43846640-43846660
64251 chr16 30681278 30681278 1 + C A rs563822289 30681277 + 30681257 30681297 41 CCCTGTAAGGGCCTCTAGGCCCTGGGCCTGCCTCCCCAAGG CCCTGTAAGGGCCTCTAGGCCATGGGCCTGCCTCCCCAAGG < 41bp 0.515803422929325 0.766418433104322 0.32797256 0.29697353 prediction 0.501230020349993 Functional Gain - FBRS ENSG00000156860 UTR3 Human protein_coding chr16:30681277 chr16:30681278 . . 0 22 hm5C_associated_SNPs_108289 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30681267-30681295
64251 chr11 64026685 64026685 1 + C G rs28395882 64026684 + 64026664 64026704 41 TTCTGCCCTGAGCGAGAGCTCCGCGGCCACCGAGCCCTCCT TTCTGCCCTGAGCGAGAGCTCGGCGGCCACCGAGCCCTCCT < 41bp 0.447032007894929 0.750589960325265 0.83792675 0.91633546 prediction 0.501179920650531 Functional Gain - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64026684 chr11:64026685 synonymous SNV . 0 22 hm5C_associated_SNPs_108291 0 0 3 FMR1 POSTAR2 ENCODE chr11:64026628-64026713
64251 chr4 109571901 109571901 1 + C A GBM 109571897 + 109571877 109571917 41 GCCCTGGTTGCACATGCCGTCGGCCATGACTGTGTATGCTC GCCCTGGTTGCACATGCCGTCGGCAATGACTGTGTATGCTC < 41bp 0.66662447295349 0.917192493580996 0.092998475 0.1486207 prediction 0.501136041255012 Functional Gain - OSTC ENSG00000198856 CDS Human protein_coding chr4:109571897 chr4:109571901 synonymous SNV . 0 25 hm5C_associated_SNPs_108293 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr4:109571812-109571926
64251 chr2 75104394 75104394 1 + C T SKCM 75104393 + 75104373 75104413 41 TCTTTGGGGGGAAGCTCAGCCCAGAGCTTCTCAACACCGGT TCTTTGGGGGGAAGCTCAGCCTAGAGCTTCTCAACACCGGT < 41bp 0.51081981124591 0.761375285376011 0.36907804 0.26227707 prediction 0.501110948260201 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75104393 chr2:75104394 nonsynonymous SNV 0.907 2 22 hm5C_associated_SNPs_108295 0 0 7 FXR2 POSTAR2 ENCODE chr2:75104349-75104400
64251 chr17 27076587 27076587 1 + C T SKCM 27076586 + 27076566 27076606 41 GTTGAACTGCCCCGGAAGATCCTCAGCTGAGTGCAGGTGGG GTTGAACTGCCCCGGAAGATCTTCAGCTGAGTGCAGGTGGG < 41bp 0.501591309042372 0.752131267762988 0.19690925 0.72616076 prediction 0.501079917441232 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27076586 chr17:27076587 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_108298 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:27076556-27076588
64251 chr12 6940469 6940469 1 + T G rs202164451 6940466 + 6940446 6940486 41 CTGCCAAGAGGGCTCTGAACCAGTACCAGGCCCAGCTGGGA CTGCCAAGAGGGCTCTGAACCAGGACCAGGCCCAGCTGGGA < 41bp 0.669590781438331 0.92011698732574 0.22805518 0.7321856 prediction 0.501052411774818 Functional Gain - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6940466 chr12:6940469 nonsynonymous SNV 0.980 2 24 hm5C_associated_SNPs_108301 0 0 1 PPIG POSTAR2 ENCODE chr12:6940425-6940481
64251 chr19 35516926 35516926 1 + C G rs55783009 35516925 + 35516905 35516945 41 CCCAGCCTCCAGCGTTCACCCCCGACCCTGCTCACCTCCTC CCCAGCCTCCAGCGTTCACCCGCGACCCTGCTCACCTCCTC < 41bp 0.607648702676257 0.858174349749423 0.045202196 0.105564475 prediction 0.501051294146332 Functional Gain - GRAMD1A ENSG00000089351 intronic Human protein_coding chr19:35516925 chr19:35516926 . . 0 22 hm5C_associated_SNPs_108302 0 0 3 SF3A3 POSTAR2 ENCODE chr19:35516913-35516959
64251 chr7 66147178 66147178 1 + C G rs3800820 66147174 + 66147154 66147194 41 GACCTGCCGAGCGACGTGGGCGAGCGGTGACCTGGACCACG GACCTGCCGAGCGACGTGGGCGAGGGGTGACCTGGACCACG < 41bp 0.479628372508297 0.75052072036186 0.87961376 0.9052716 prediction 0.50104144072372 Functional Gain - RABGEF1 ENSG00000154710 UTR5 Human protein_coding chr7:66147174 chr7:66147178 . . 0 25 hm5C_associated_SNPs_108303 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:66147178-66147179
64251 chr11 63987053 63987053 1 + C T GBM 63987052 + 63987032 63987072 41 GGGGAGCCGGCTGGCACAGACCCAGGGCTGGACGACCTGGA GGGGAGCCGGCTGGCACAGACTCAGGGCTGGACGACCTGGA < 41bp 0.508800263024431 0.759320869153469 0.77815986 0.12858066 prediction 0.501041212258076 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987052 chr11:63987053 nonsynonymous SNV 0.571 0 22 hm5C_associated_SNPs_108304 0 0 5 DDX24 POSTAR2 ENCODE chr11:63987017-63987126
64251 chr1 151372164 151372164 1 + C A OV 151372163 + 151372143 151372183 41 CTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGA CTCCCGATTCCTTCATGGATCAGGCGTCTGCACTTTACAGA < 41bp 0.513250060926439 0.763766640278856 0.516337 0.8270153 prediction 0.501033158704835 Functional Gain - PSMB4 ENSG00000159377 CDS Human protein_coding chr1:151372163 chr1:151372164 nonsynonymous SNV 0.010 1 22 hm5C_associated_SNPs_108305 0 0 27 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:151372148-151372165
64251 chr3 38045751 38045751 1 + C A COAD 38045750 + 38045730 38045770 41 TGTCCGTGCTGGCCAGGCTCCCTGAGGAGGTCCCCAGCTTC TGTCCGTGCTGGCCAGGCTCCATGAGGAGGTCCCCAGCTTC < 41bp 0.492647309973534 0.750492199046991 0.27889013 0.27511153 prediction 0.500984398093983 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38045750 chr3:38045751 nonsynonymous SNV 0.698 1 22 hm5C_associated_SNPs_108310 0 0 5 BUD13 POSTAR2 ENCODE chr3:38045705-38045778
64251 chr19 10369957 10369957 1 + T G UCEC 10369955 + 10369935 10369975 41 CCCAAGTCATCAGGGTGGCACGTCAGGCCCTGCACGATGTG CCCAAGTCATCAGGGTGGCACGGCAGGCCCTGCACGATGTG < 41bp 0.609814160907775 0.860300745789442 0.5888802 0.9259404 prediction 0.500973169763334 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10369955 chr19:10369957 synonymous SNV . 0 23 hm5C_associated_SNPs_108312 0 0 4 HNRNPK POSTAR2 ENCODE chr19:10369942-10370036
64251 chr12 132426506 132426506 1 + C A rs149378338 132426502 + 132426482 132426522 41 ACAACTTCAGTGCCACCGCTCTCACGGCAGGTGGCACGGGC ACAACTTCAGTGCCACCGCTCTCAAGGCAGGTGGCACGGGC < 41bp 0.339454535504362 0.750486267977292 0.07478607 0.24136937 prediction 0.500972535954583 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132426502 chr12:132426506 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_108313 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132426500-132426528
64251 chr22 32253488 32253488 1 + C A rs373166302 32253484 + 32253464 32253504 41 TGGGAAGAGCTCCGCCCAGTCAGCCGAGAGCAGCAGCGTTG TGGGAAGAGCTCCGCCCAGTCAGCAGAGAGCAGCAGCGTTG < 41bp 0.658477801554956 0.908950324452403 0.3539346 0.6509292 prediction 0.500945045794894 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32253484 chr22:32253488 synonymous SNV . 0 25 hm5C_associated_SNPs_108316 0 0 1 PPIG POSTAR2 ENCODE chr22:32253430-32253507
64251 chrX 55757849 55757849 1 + C T UCEC 55757848 + 55757828 55757868 41 AGCCAACGGGACAACATCTTCCGAAATGTGGAGGTTCTGAT AGCCAACGGGACAACATCTTCTGAAATGTGGAGGTTCTGAT < 41bp 0.495663146399609 0.75046303649564 0.17189878 0.12638238 prediction 0.50092607299128 Functional Gain - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55757848 chrX:55757849 stopgain 0.998 1 22 hm5C_associated_SNPs_108318 0 0 2 GRWD1 POSTAR2 ENCODE chrX:55757829-55757956
64251 chr12 121132914 121132914 1 + C T SKCM 121132913 + 121132893 121132933 41 CCTAGGGGTACTATGACAATCCCAAGGTCTGTGCACTCTAC CCTAGGGGTACTATGACAATCTCAAGGTCTGTGCACTCTAC < 41bp 0.541853233496237 0.792309183315201 0.13870427 0.10757667 prediction 0.500911899637928 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121132913 chr12:121132914 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108319 0 0 19 UPF1 POSTAR2 GSE69586,GSM1704214 chr12:121132900-121132920
64251 chr19 45971880 45971880 1 + C A TGCT 45971876 + 45971856 45971896 41 TTTCCCCGGAGACTACGACTCCGGCTCCCGGTGCAGCTCCT TTTCCCCGGAGACTACGACTCCGGATCCCGGTGCAGCTCCT < 41bp 0.366706109292094 0.750431942132943 0.47373995 0.59247077 prediction 0.500863884265886 Functional Gain - FOSB ENSG00000125740 CDS Human protein_coding chr19:45971876 chr19:45971880 synonymous SNV . 0 25 hm5C_associated_SNPs_108326 0 0 1 RBM15 POSTAR2 ENCODE chr19:45971854-45971902
64251 chr3 57542130 57542130 1 + C A CESC 57542126 + 57542106 57542146 41 CATGTGGAGGCTCCCAGGCGCCCGCGCCGCGCTTCGGGTGA CATGTGGAGGCTCCCAGGCGCCCGAGCCGCGCTTCGGGTGA < 41bp 0.653418479680951 0.90384116113743 0.045218617 0.12257391 prediction 0.500845362912959 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542126 chr3:57542130 synonymous SNV . 0 25 hm5C_associated_SNPs_108330 0 0 2 DDX3X POSTAR2 ENCODE chr3:57542106-57542169
64251 chr9 96407983 96407983 1 + C G rs9695734 96407982 + 96407962 96408002 41 CATGGAGGAGCACGGCTTCACCGAGCCCATCCTCGTCCCTA CATGGAGGAGCACGGCTTCACGGAGCCCATCCTCGTCCCTA < 41bp 0.611846860306273 0.862251935773002 0.43206388 0.8957615 prediction 0.500810150933458 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96407982 chr9:96407983 synonymous SNV . 0 22 hm5C_associated_SNPs_108332 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:96407966-96408004
64251 chrX 67937280 67937280 1 + C A LUAD 67937279 + 67937259 67937299 41 AGCCAGCAGACTTGCCCTTGCCAGGCCGTGCCCCCAGCTCG AGCCAGCAGACTTGCCCTTGCAAGGCCGTGCCCCCAGCTCG < 41bp 0.525399817791071 0.775800013897315 0.72740483 0.89112973 prediction 0.500800392212489 Functional Gain - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67937279 chrX:67937280 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_108335 0 0 1 DDX6 POSTAR2 ENCODE chrX:67937244-67937293
64251 chr16 3535857 3535857 1 + C A rs369683370 3535853 + 3535833 3535873 41 GCAGCCTGGGGGAGGCTTTCCTCGCAAGCACAGAGCTCTGA GCAGCCTGGGGGAGGCTTTCCTCGAAAGCACAGAGCTCTGA < 41bp 0.656454778090941 0.906845006735694 0.58018565 0.9242908 prediction 0.500780457289505 Functional Gain - NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3535853 chr16:3535857 . . 0 25 hm5C_associated_SNPs_108336 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3535847-3535901
64251 chr11 117152717 117152717 1 + C T LAML 117152716 + 117152696 117152736 41 GGTTATGCCCAGTGCAGATCCCCGCTCCTTGTCTTTCCCAA GGTTATGCCCAGTGCAGATCCTCGCTCCTTGTCTTTCCCAA < 41bp 0.517586059593759 0.767958326719138 0.09518036 0.058240592 prediction 0.500744534250757 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152716 chr11:117152717 synonymous SNV . 0 22 hm5C_associated_SNPs_108337 0 0 3 GRWD1 POSTAR2 ENCODE chr11:117152642-117152732
64251 chrX 48341100 48341100 1 + C A LUAD 48341099 + 48341079 48341119 41 AGCTGGCCAAGGAGATCCGCCCCCAGGACTGCCCCATCAGC AGCTGGCCAAGGAGATCCGCCACCAGGACTGCCCCATCAGC < 41bp 0.523170171008972 0.773532309540305 0.08423495 0.11601052 prediction 0.500724277062666 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48341099 chrX:48341100 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_108339 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:48341097-48341118
64251 chr12 100612246 100612246 1 + T C UCEC 100612244 + 100612224 100612264 41 ACAAATCTGGGGAACAAATTCTTCGTTTGGCCAATGAGAGA ACAAATCTGGGGAACAAATTCTCCGTTTGGCCAATGAGAGA < 41bp 0.458566836456501 0.750359741948881 0.08271429 0.06616861 prediction 0.500719483897762 Functional Gain - ACTR6 ENSG00000075089 CDS Human protein_coding chr12:100612244 chr12:100612246 synonymous SNV . 0 23 hm5C_associated_SNPs_108340 0 0 7 ZC3H7B POSTAR2 GSE38201,GSM936510 chr12:100612218-100612246
64251 chr11 63965419 63965419 1 + C A rs375422757 63965418 + 63965398 63965438 41 GTCTCTGGCAGAGCACCGAACCCCAGATGTGCTCAAGAAAT GTCTCTGGCAGAGCACCGAACACCAGATGTGCTCAAGAAAT < 41bp 0.510315822923833 0.760671075372178 0.31852567 0.19220975 prediction 0.500710504896689 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63965418 chr11:63965419 synonymous SNV . 0 22 hm5C_associated_SNPs_108341 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:63965389-63965421
64251 chr16 90110056 90110056 1 + C A UCEC 90110055 + 90110035 90110075 41 CTCAGAGTGCCCCGCACTCACCTGGGGGTTGGGGCAGTGCC CTCAGAGTGCCCCGCACTCACATGGGGGTTGGGGCAGTGCC < 41bp 0.51827984767907 0.768599750239558 0.7540549 0.93160677 prediction 0.500639805120977 Functional Gain - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90110055 chr16:90110056 . . 0 22 hm5C_associated_SNPs_108350 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:90110038-90110070
64251 chr6 96969791 96969791 1 + C A HNSC 96969787 + 96969767 96969807 41 AGAGATTAGGCGGTTGGCGGCCGACTTCCAGCGGGCGCAGT AGAGATTAGGCGGTTGGCGGCCGAATTCCAGCGGGCGCAGT < 41bp 0.389772768077627 0.750268176012716 0.8323177 0.6429323 prediction 0.500536352025432 Functional Gain - UFL1 ENSG00000014123 CDS Human protein_coding chr6:96969787 chr6:96969791 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_108359 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:96969759-96969818
64251 chr1 76262726 76262726 1 + C A BLCA 76262722 + 76262702 76262742 41 CTTCTGCCCCGGCGGTTTCCCCGTCGTCGGGAGAAACCCGC CTTCTGCCCCGGCGGTTTCCCCGTAGTCGGGAGAAACCCGC < 41bp 0.37463268940483 0.750253698318985 0.2145012 0.071284145 prediction 0.500507396637971 Functional Gain - MSH4 ENSG00000057468 CDS Human protein_coding chr1:76262722 chr1:76262726 stopgain 0.000 0 25 hm5C_associated_SNPs_108362 0 0 1 XPO5 POSTAR2 ENCODE chr1:76262666-76262742
64251 chr14 21961130 21961130 1 + C T UCEC 21961129 + 21961109 21961149 41 CCCCTCCATTACAACAGATGCCACAGCCCCCGACTCAGCAG CCCCTCCATTACAACAGATGCTACAGCCCCCGACTCAGCAG < 41bp 0.51890418997307 0.76915260003182 0.007287711 0.44986877 prediction 0.5004968201175 Functional Gain - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961129 chr14:21961130 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_108363 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:21961115-21961151
64251 chr8 22426700 22426700 1 + C A LUAD 22426699 + 22426679 22426719 41 ATCCCTAAGCCCATCAAGCCCCCGACCTACCAGGTGCTGGA ATCCCTAAGCCCATCAAGCCCACGACCTACCAGGTGCTGGA < 41bp 0.516059846830267 0.766281429582715 0.25867686 0.19127959 prediction 0.500443165504895 Functional Gain - SORBS3 ENSG00000120896 CDS Human protein_coding chr8:22426699 chr8:22426700 nonsynonymous SNV 0.832 0 22 hm5C_associated_SNPs_108369 0 0 5 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:22426689-22426717
64251 chr19 10818212 10818212 1 + T C COAD 10818210 + 10818190 10818230 41 TGGACCGGTGCATTGCAGCCCATCAGCGGCCGGACAAGCAG TGGACCGGTGCATTGCAGCCCACCAGCGGCCGGACAAGCAG < 41bp 0.565134893874828 0.815351606379747 0.411464 0.3475737 prediction 0.500433425009839 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10818210 chr19:10818212 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_108370 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10818200-10818258
64251 chr17 18005286 18005286 1 + C T STAD 18005285 + 18005265 18005305 41 GAAGAGGTGGACCGCCTGGCCCGAAAACCCAACAGTGTGGT GAAGAGGTGGACCGCCTGGCCTGAAAACCCAACAGTGTGGT < 41bp 0.496941592860729 0.750213467767998 0.06909227 0.07844007 prediction 0.500426935535996 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18005285 chr17:18005286 stopgain 0.511 1 22 hm5C_associated_SNPs_108371 0 0 1 BUD13 POSTAR2 ENCODE chr17:18005189-18005319
64251 chr17 57270975 57270975 1 + C A HNSC 57270971 + 57270951 57270991 41 AGACTCCAAAGCTGTGCTTCCTCCCACACTGCCACAGCCAG AGACTCCAAAGCTGTGCTTCCTCCAACACTGCCACAGCCAG < 41bp 0.313776307624176 0.750207690205336 0.15459114 0.9596409 prediction 0.500415380410672 Functional Gain - PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270971 chr17:57270975 synonymous SNV . 0 25 hm5C_associated_SNPs_108373 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:57270939-57270987
64251 chr16 48396114 48396114 1 - G T ACC 48396115 - 48396095 48396135 41 CTCACATGTTGTCCAACTTGCCGGGGCCCTTTGGGATCCAT CTCACATGTTGTCCAACTTGCAGGGGCCCTTTGGGATCCAT < 41bp 0.52336897761734 0.773540338801083 0.60138655 0.8732047 prediction 0.500342722367487 Functional Gain - SIAH1 ENSG00000196470 CDS Human protein_coding chr16:48396115 chr16:48396114 synonymous SNV . 0 22 hm5C_associated_SNPs_108378 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:48396075-48396130
64251 chr11 65403915 65403915 1 + C A COAD 65403911 + 65403891 65403931 41 CCTGGCTGGGGGCCGCGGTCCTCCCTGAGTGGCTCTGGTGA CCTGGCTGGGGGCCGCGGTCCTCCATGAGTGGCTCTGGTGA < 41bp 0.329485560897651 0.750168153859256 0.2924895 0.9656416 prediction 0.500336307718512 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403911 chr11:65403915 nonsynonymous SNV 0.918 0 25 hm5C_associated_SNPs_108379 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:65403780-65403916
64251 chr9 131910683 131910683 1 + C G rs376025897 131910679 + 131910659 131910699 41 CTTTGCGCTGCTGTGAGCCTCACCCTGGGCCCCTGGGCCCT CTTTGCGCTGCTGTGAGCCTCACCGTGGGCCCCTGGGCCCT < 41bp 0.485762772121533 0.750161978421335 0.021435916 0.28434467 prediction 0.50032395684267 Functional Gain - PTPA ENSG00000119383 UTR3 Human protein_coding chr9:131910679 chr9:131910683 . . 0 25 hm5C_associated_SNPs_108380 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:131910663-131910683
64251 chr17 80544992 80544992 1 + C T GBM 80544991 + 80544971 80545011 41 GCCACGCTCGGCACTGCCAGCCGGATCATTCAGACGGCACA GCCACGCTCGGCACTGCCAGCTGGATCATTCAGACGGCACA < 41bp 0.510654760477315 0.760805336947737 0.9051984 0.5027793 prediction 0.500301152940845 Functional Gain - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80544991 chr17:80544992 nonsynonymous SNV 0.335 5 22 hm5C_associated_SNPs_108381 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:80544934-80544996
64251 chr11 119206690 119206690 1 + C A rs141362166 119206689 + 119206669 119206709 41 CCTAGCACTGGGCTCAGAGGCCTGGCGCCGAGTCTGGAGCC CCTAGCACTGGGCTCAGAGGCATGGCGCCGAGTCTGGAGCC < 41bp 0.502766127498712 0.752895918218122 0.60733473 0.86702746 prediction 0.500259581438822 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206689 chr11:119206690 synonymous SNV . 0 22 hm5C_associated_SNPs_108383 0 0 3 IGF2BP2 POSTAR2 ENCODE chr11:119206668-119206690
64251 chr19 50549146 50549146 1 + C A UCEC 50549145 + 50549125 50549165 41 GCGACATCAGGCCATTCACACCGCAGAAAAGCCCTATAGCT GCGACATCAGGCCATTCACACAGCAGAAAAGCCCTATAGCT < 41bp 0.528559299566221 0.778682127303703 0.34446186 0.84402204 prediction 0.500245655474963 Functional Gain - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50549145 chr19:50549146 synonymous SNV . 0 22 hm5C_associated_SNPs_108385 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50549100-50549146
64251 chr4 38016254 38016254 1 + T C UCEC 38016252 + 38016232 38016272 41 GAGGTGCTCTTCTGCGGCCGCGTGACGGTGGCGCACAAGAA GAGGTGCTCTTCTGCGGCCGCGCGACGGTGGCGCACAAGAA < 41bp 0.530991324069809 0.781109954850582 0.4594226 0.47376642 prediction 0.500237261561546 Functional Gain - TBC1D1 ENSG00000065882 CDS Human protein_coding chr4:38016252 chr4:38016254 nonsynonymous SNV 0.740 2 23 hm5C_associated_SNPs_108386 0 0 1 EIF3D POSTAR2 ENCODE chr4:38016218-38016304
64251 chr16 2569311 2569311 1 + C T SKCM 2569310 + 2569290 2569330 41 CAGATCATGAAGTCCATCATCCCAGTGGTCATGGCTGGCAT CAGATCATGAAGTCCATCATCTCAGTGGTCATGGCTGGCAT < 41bp 0.516597055589884 0.766709910145407 0.34579018 0.2650957 prediction 0.500225709111046 Functional Gain - ATP6V0C ENSG00000185883;ENSG00000260272 CDS Human other chr16:2569310 chr16:2569311 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_108387 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:2569273-2569331
64251 chr2 120194680 120194680 1 + C G rs72833259 120194679 + 120194659 120194699 41 CTTCAGAGACCTGGGCCAGGCCCATGTGCCCGGGCTGGCCG CTTCAGAGACCTGGGCCAGGCGCATGTGCCCGGGCTGGCCG < 41bp 0.43573342654107 0.750083295167062 0.14263734 0.29469416 prediction 0.500166590334123 Functional Gain - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194679 chr2:120194680 synonymous SNV . 0 22 hm5C_associated_SNPs_108394 0 0 4 DDX3X POSTAR2 ENCODE chr2:120194663-120194720
64251 chr11 70281285 70281285 1 + C G rs185470349 70281281 + 70281261 70281301 41 GGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCTGG GGCAGTAGGGCCCCCAGCCCCCCCGCGGAGCTGCGCCCTGG < 41bp 0.458603588072545 0.750054152830055 0.08123317 0.21540847 prediction 0.50010830566011 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281281 chr11:70281285 . . 0 25 hm5C_associated_SNPs_108402 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr3 183353477 183353477 1 + C A rs570951177 183353473 + 183353453 183353493 41 GCGCTGGAGAGTGCGCTGCGCCGCCCGCCGCTGAGGGACCG GCGCTGGAGAGTGCGCTGCGCCGCACGCCGCTGAGGGACCG < 41bp 0.3860270724061 0.75004922727006 0.13440248 0.1697377 prediction 0.500098454540121 Functional Gain - KLHL24 ENSG00000114796 UTR5 Human protein_coding chr3:183353473 chr3:183353477 . . 0 25 hm5C_associated_SNPs_108405 0 0 9 DDX3X POSTAR2 ENCODE chr3:183353424-183353478
64251 chr2 9616161 9616161 1 + C G rs61732203 9616157 + 9616137 9616177 41 TGGGGAGCATCGCTGGCTGACAGGCTGGTCAGGTGAGAATG TGGGGAGCATCGCTGGCTGACAGGGTGGTCAGGTGAGAATG < 41bp 0.583621690650706 0.833667270179293 0.75250846 0.907238 prediction 0.500091159057175 Functional Gain - IAH1 ENSG00000134330 CDS Human protein_coding chr2:9616157 chr2:9616161 nonsynonymous SNV 0.976 2 25 hm5C_associated_SNPs_108406 0 0 3 DDX3X POSTAR2 ENCODE chr2:9616115-9616165
64251 chr11 45826700 45826700 1 + C A rs150274138 45826696 + 45826676 45826716 41 GGGCCCGCCTCCCGGGGAGTCGGCCTCGGATGTCCGGAGGC GGGCCCGCCTCCCGGGGAGTCGGCATCGGATGTCCGGAGGC < 41bp 0.653706441662471 0.90373092699347 0.91919386 0.92570394 prediction 0.500048970661998 Functional Gain - SLC35C1 ENSG00000181830 UTR5 Human protein_coding chr11:45826696 chr11:45826700 . . 0 25 hm5C_associated_SNPs_108410 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:45826700-45826701
64251 chr14 67770269 67770269 1 + C T UCEC 67770268 + 67770248 67770288 41 CATGGTACTTTGACTTTTGTCCTGATTCCCAGTCAACAGAT CATGGTACTTTGACTTTTGTCTTGATTCCCAGTCAACAGAT < 41bp 0.497911937338845 0.750003924725656 0.10948253 0.21056837 prediction 0.500007849451312 Functional Gain - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67770268 chr14:67770269 synonymous SNV . 0 22 hm5C_associated_SNPs_108416 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:67770259-67770286
64251 chr8 145235425 145235425 1 + C A rs199893550 145235424 + 145235404 145235444 41 GGTGCGCGTGGCCTTCTGCTCCGGTAAGAGGCGGCCTCGTC GGTGCGCGTGGCCTTCTGCTCAGGTAAGAGGCGGCCTCGTC < 41bp 0.496222299977535 0.750002971370601 0.6350361 0.85080826 prediction 0.500005942741202 Functional Gain - MROH1 ENSG00000179832 CDS Human protein_coding chr8:145235424 chr8:145235425 synonymous SNV . 0 22 hm5C_associated_SNPs_108417 0 0 1 PRPF8 POSTAR2 ENCODE chr8:145235410-145235463
64251 chr14 93275769 93275769 1 + C A STAD 93275768 + 93275748 93275788 41 AGCTGTGGCTGCAAAGGATTCCCAGCTGGCTGTACTGAAAG AGCTGTGGCTGCAAAGGATTCACAGCTGGCTGTACTGAAAG < 41bp 0.498584200757579 0.749984233680559 0.021073252 0.03897813 prediction 0.499968467361118 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93275768 chr14:93275769 synonymous SNV . 0 22 hm5C_associated_SNPs_108422 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr14:93275764-93275799
64251 chr11 563412 563412 1 + C G rs140192306 563408 + 563388 563428 41 ACCCACAGGGCCCTCTGCCTCCAGCCAGAGAGGAGTCCCTC ACCCACAGGGCCCTCTGCCTCCAGGCAGAGAGGAGTCCCTC < 41bp 0.573526580443401 0.823496850784534 0.40115213 0.88245106 prediction 0.499940540682266 Functional Gain - RASSF7 ENSG00000099849 CDS Human protein_coding chr11:563408 chr11:563412 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_108424 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:563377-563415
64251 chr2 112686781 112686781 1 + C A COAD 112686780 + 112686760 112686800 41 GCCTGCAAACTGACCACACACCGCTGTTATCCCTTCCTCAC GCCTGCAAACTGACCACACACAGCTGTTATCCCTTCCTCAC < 41bp 0.526661837492892 0.776622429551517 0.15922576 0.35550493 prediction 0.49992118411725 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112686780 chr2:112686781 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_108426 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:112686780-112686781
64251 chr17 76164758 76164758 1 + C G rs11557900 76164757 + 76164737 76164777 41 TCCTTCGACCTGCGGCGCTTCCTGACGCAGCCGCAGGTGGT TCCTTCGACCTGCGGCGCTTCGTGACGCAGCCGCAGGTGGT < 41bp 0.583257185102281 0.833213721263317 0.25266033 0.39120048 prediction 0.499913072322072 Functional Gain - SYNGR2 ENSG00000108639 CDS Human protein_coding chr17:76164757 chr17:76164758 nonsynonymous SNV 0.985 0 22 hm5C_associated_SNPs_108428 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76164731-76164760
64251 chrX 54949318 54949318 1 + C A UCEC 54949314 + 54949294 54949334 41 CAGTCATTACCCAGATCAGCCAGGCTTTACCTACCACTGAG CAGTCATTACCCAGATCAGCCAGGATTTACCTACCACTGAG < 41bp 0.355642964602895 0.749950079138291 0.6695279 0.5790057 prediction 0.499900158276582 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54949314 chrX:54949318 nonsynonymous SNV 0.376 1 25 hm5C_associated_SNPs_108430 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:54949312-54949344
64251 chr15 29397662 29397662 1 + C T LUAD 29397661 + 29397641 29397681 41 GCGAGCCAATGGCATCAACCCCGAAGACTTGAGCCAGAAGG GCGAGCCAATGGCATCAACCCTGAAGACTTGAGCCAGAAGG < 41bp 0.517723550594759 0.767629646133525 0.025934666 0.016554952 prediction 0.499812191077532 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29397661 chr15:29397662 synonymous SNV . 0 22 hm5C_associated_SNPs_108436 0 0 2 ZNF622 POSTAR2 ENCODE chr15:29397635-29397668
64251 chr2 33003043 33003043 1 + C T SKCM 33003042 + 33003022 33003062 41 AGCGCTGTGTGACTCTAGAACCCGATGTAAGTTTGTTTGAT AGCGCTGTGTGACTCTAGAACTCGATGTAAGTTTGTTTGAT < 41bp 0.523022835688207 0.772915079017558 0.19736543 0.38362882 prediction 0.499784486658702 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:33003042 chr2:33003043 nonsynonymous SNV 0.946 3 22 hm5C_associated_SNPs_108438 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:33003024-33003046
64251 chr2 101611990 101611990 1 + C T LUSC 101611989 + 101611969 101612009 41 GCCCCAGCCCCTACGTCCTCCCCGAAGGGTCAGCAGTCTGT GCCCCAGCCCCTACGTCCTCCTCGAAGGGTCAGCAGTCTGT < 41bp 0.513808917020555 0.763680962611443 0.01766783 0.4783041 prediction 0.499744091181776 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101611989 chr2:101611990 synonymous SNV . 0 22 hm5C_associated_SNPs_108442 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101611926-101611992
64251 chr5 140021554 140021554 1 + C A rs528915325 140021553 + 140021533 140021573 41 CCTGCATGAGCTCTCTCACTCCGAGCAGTCCACTGTTGCTG CCTGCATGAGCTCTCTCACTCAGAGCAGTCCACTGTTGCTG < 41bp 0.524373568503909 0.774227322082171 0.62263894 0.9288479 prediction 0.499707507156525 Functional Gain - TMCO6 ENSG00000113119 CDS Human protein_coding chr5:140021553 chr5:140021554 synonymous SNV . 0 22 hm5C_associated_SNPs_108446 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:140021537-140021557
64251 chrX 129149402 129149402 1 + C A UCEC 129149401 + 129149381 129149421 41 GCGAAGCCGTGCACGGACTTCCTGAGGGGCAACCACGGCCT GCGAAGCCGTGCACGGACTTCATGAGGGGCAACCACGGCCT < 41bp 0.486775258221497 0.749849381579306 0.5726391 0.73687196 prediction 0.499698763158612 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129149401 chrX:129149402 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_108447 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129149400-129149420
64251 chr15 89164567 89164567 1 + C G rs578229257 89164563 + 89164543 89164583 41 GCCCGGGCATGTGGGAGCTGCCGGCTTTCCGGACGCCACGT GCCCGGGCATGTGGGAGCTGCCGGGTTTCCGGACGCCACGT < 41bp 0.578651166888553 0.828490501251673 0.9290039 0.93935966 prediction 0.499678668726241 Functional Gain - AEN ENSG00000181026 UTR5 Human protein_coding chr15:89164563 chr15:89164567 . . 0 25 hm5C_associated_SNPs_108450 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:89164560-89164580
64251 chr3 110837599 110837599 1 + C T SKCM 110837598 + 110837578 110837618 41 GCATCGCAGCCACTGGAAAACCCGTTGCACATATTGACTGG GCATCGCAGCCACTGGAAAACTCGTTGCACATATTGACTGG < 41bp 0.503511682887588 0.753336309874147 0.19640559 0.11193952 prediction 0.499649253973119 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110837598 chr3:110837599 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_108452 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:110837560-110837601
64251 chr19 806426 806426 1 + T G SKCM 806424 + 806404 806444 41 CCAGGCCTTTCCGTTCCGAACGTCCACGGCGCCCTGGCCCC CCAGGCCTTTCCGTTCCGAACGGCCACGGCGCCCTGGCCCC < 41bp 0.393157113371501 0.749819723661741 0.40127861 0.43871766 prediction 0.499639447323481 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:806424 chr19:806426 nonsynonymous SNV 0.006 0 23 hm5C_associated_SNPs_108453 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:806400-806440
64251 chr12 120972333 120972333 1 + C G rs11542860 120972332 + 120972312 120972352 41 GGCGGGGCTCGCGCAACCTCCCTCGCCTCCCCTTCCCCCGC GGCGGGGCTCGCGCAACCTCCGTCGCCTCCCCTTCCCCCGC < 41bp 0.472848332319524 0.749794756717518 0.19947842 0.402227 prediction 0.499589513435036 Functional Gain - RNF10 ENSG00000022840 UTR5 Human protein_coding chr12:120972332 chr12:120972333 . . 0 22 hm5C_associated_SNPs_108455 0 0 7 EIF3B POSTAR2 GSE65004,GSM1585667 chr12:120972320-120972340
64251 chr9 131767989 131767989 1 + C T UCEC 131767988 + 131767968 131768008 41 TACCACTCCCACCTTTGACTCCGAAGTGGCCCCCTCCTTCG TACCACTCCCACCTTTGACTCTGAAGTGGCCCCCTCCTTCG < 41bp 0.498375826180581 0.749794605544015 0.05538678 0.04406333 prediction 0.49958921108803 Functional Gain - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131767988 chr9:131767989 synonymous SNV . 0 22 hm5C_associated_SNPs_108456 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:131767955-131767993
64251 chr11 111899620 111899620 1 + C A READ 111899616 + 111899596 111899636 41 CCCCTGCTGCCACTGCTTCGCCACCTACACCTTCTGCTCAG CCCCTGCTGCCACTGCTTCGCCACATACACCTTCTGCTCAG < 41bp 0.345227316288501 0.749790295662437 0.046606004 0.17208102 prediction 0.499580591324873 Functional Gain - DLAT ENSG00000150768 CDS Human protein_coding chr11:111899616 chr11:111899620 nonsynonymous SNV 0.006 3 25 hm5C_associated_SNPs_108457 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:111899620-111899640
64251 chr6 126249996 126249996 1 + C G rs184688055 126249995 + 126249975 126250015 41 AAGCTGGCTGGAAAAAGAAGCCCCAGCCCAGCCTGCCTCAT AAGCTGGCTGGAAAAAGAAGCGCCAGCCCAGCCTGCCTCAT < 41bp 0.45921353195901 0.749777610443561 0.09750152 0.1895844 prediction 0.499555220887123 Functional Gain - NCOA7 ENSG00000111912 UTR3 Human protein_coding chr6:126249995 chr6:126249996 . . 0 22 hm5C_associated_SNPs_108459 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:126249996-126249997
64251 chr1 153945266 153945266 1 + T A LUSC 153945262 + 153945242 153945282 41 TGACCGATGAGGAGAAGCGTCTGCTGGGGCAGGAAGGGGTT TGACCGATGAGGAGAAGCGTCTGCAGGGGCAGGAAGGGGTT < 41bp 0.631969987940328 0.881696894663802 0.75549054 0.8682262 prediction 0.499453813446949 Functional Gain - CREB3L4 ENSG00000143578 CDS Human protein_coding chr1:153945262 chr1:153945266 nonsynonymous SNV 0.996 5 25 hm5C_associated_SNPs_108467 0 0 1 PPIG POSTAR2 ENCODE chr1:153945228-153945327
64251 chr12 58002312 58002312 1 + C T SKCM 58002311 + 58002291 58002331 41 CCTTCCTCCCAGGCTGAACACCCAAACCCAGGAGTTCGGTA CCTTCCTCCCAGGCTGAACACTCAAACCCAGGAGTTCGGTA < 41bp 0.52014468940128 0.769870364413107 0.26811418 0.5276833 prediction 0.499451350023653 Functional Gain - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58002311 chr12:58002312 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_108469 0 0 1 GRWD1 POSTAR2 ENCODE chr12:58002302-58002313
64251 chr15 58840537 58840537 1 + C A COAD 58840536 + 58840516 58840556 41 CCCTGTGTTCCAGCCATCACCCAGACCATAAAATGCTCCCA CCCTGTGTTCCAGCCATCACCAAGACCATAAAATGCTCCCA < 41bp 0.521068689849899 0.770753006837851 0.24298665 0.3450418 prediction 0.499368633975903 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58840536 chr15:58840537 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_108473 0 0 2 BUD13 POSTAR2 ENCODE chr15:58840482-58840547
64251 chr20 30155955 30155955 1 + C G UCS 30155951 + 30155931 30155971 41 TCCCCACAGTCTCGGGCTCCCCAGCCAGCCTGGCCGACTCC TCCCCACAGTCTCGGGCTCCCCAGGCAGCCTGGCCGACTCC < 41bp 0.467365457274819 0.749675180818156 0.042666048 0.16492522 prediction 0.499350361636313 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30155951 chr20:30155955 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_108474 0 0 3 HNRNPK POSTAR2 ENCODE chr20:30155886-30155981
64251 chr13 88328747 88328747 1 + C T SKCM 88328746 + 88328726 88328766 41 CATCGCCTATCAGACCAAATCCCCGGTGCCTTTGGAGTGTC CATCGCCTATCAGACCAAATCTCCGGTGCCTTTGGAGTGTC < 41bp 0.538269140947541 0.787930111145525 0.52818376 0.8152652 prediction 0.499321940395969 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328746 chr13:88328747 synonymous SNV . 0 22 hm5C_associated_SNPs_108478 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88328720-88328760
64251 chr1 89150137 89150137 1 + T G rs534985918 89150135 + 89150115 89150155 41 TCCAGCAGGGGCTGCGCCTCCATGAATCCCTAGTTGTTTTT TCCAGCAGGGGCTGCGCCTCCAGGAATCCCTAGTTGTTTTT < 41bp 0.585338721723048 0.83499052057117 0.27437592 0.8471733 prediction 0.499303597696244 Functional Gain - PKN2-AS1 ENSG00000237505 ncRNA_intronic Human antisense chr1:89150135 chr1:89150137 . . 0 23 hm5C_associated_SNPs_108482 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:89150126-89150147
64251 chr20 49177930 49177930 1 + T G LUSC 49177928 + 49177908 49177948 41 ACATGAAGCCAGTGACTTCCCATGTAGAGTGGCCAAGCTTC ACATGAAGCCAGTGACTTCCCAGGTAGAGTGGCCAAGCTTC < 41bp 0.403296813398707 0.749648540596549 0.043194473 0.5080227 prediction 0.499297081193098 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49177928 chr20:49177930 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_108484 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:49177903-49177953
64251 chr12 110719192 110719192 1 + C G rs3026433 110719188 + 110719168 110719208 41 CGCCCCGCCGGCTCGCCTCCCTCGCCGCGTTCCGCCCTCAG CGCCCCGCCGGCTCGCCTCCCTCGGCGCGTTCCGCCCTCAG < 41bp 0.529627320431995 0.779273261381602 0.027076036 0.0709438 prediction 0.499291881899214 Functional Gain - ATP2A2 ENSG00000174437 UTR5 Human protein_coding chr12:110719188 chr12:110719192 . . 0 25 hm5C_associated_SNPs_108485 1 1 19 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:110719164-110719195
64251 chr1 46870761 46870761 1 + C A rs324420 46870760 + 46870740 46870780 41 GAGACTCAGCTGTCTCAGGCCCCAAGGCAGGGCCTGCTCTA GAGACTCAGCTGTCTCAGGCCACAAGGCAGGGCCTGCTCTA < 41bp 0.517621439447338 0.76725686046891 0.4309322 0.65544474 prediction 0.499270842043144 Functional Gain - FAAH ENSG00000117480 CDS Human protein_coding chr1:46870760 chr1:46870761 nonsynonymous SNV 0.965 0 22 hm5C_associated_SNPs_108486 1 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46870760-46870780
64251 chr9 130981392 130981392 1 + C G rs143834670 130981388 + 130981368 130981408 41 GGTCCCGGTGGGGGACCAACCTCCCGACATCGAGTTCCAGA GGTCCCGGTGGGGGACCAACCTCCGGACATCGAGTTCCAGA < 41bp 0.574420222705858 0.8240465587231 0.22819969 0.40392214 prediction 0.499252672034483 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130981388 chr9:130981392 synonymous SNV . 0 25 hm5C_associated_SNPs_108488 1 0 2 SUB1 POSTAR2 ENCODE chr9:130981356-130981405
64251 chr22 35783086 35783086 1 + C T SKCM 35783085 + 35783065 35783105 41 TTCAAGCAGCTCTACCGCTCCCGCATGAACTCCCTGGAGAT TTCAAGCAGCTCTACCGCTCCTGCATGAACTCCCTGGAGAT < 41bp 0.541976990948249 0.79160041067471 0.117875636 0.14719218 prediction 0.499246839452921 Functional Gain - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783085 chr22:35783086 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_108489 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr9 139973806 139973806 1 + C T UCEC 139973805 + 139973785 139973825 41 CAGCGAGATCAGTCCTGAGACCGCACAGCTACGTGCCTCCG CAGCGAGATCAGTCCTGAGACTGCACAGCTACGTGCCTCCG < 41bp 0.502846833639146 0.752468050192923 0.1658054 0.12998629 prediction 0.499242433107555 Functional Gain - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139973805 chr9:139973806 synonymous SNV . 0 22 hm5C_associated_SNPs_108492 0 0 2 GRWD1 POSTAR2 ENCODE chr9:139973722-139973839
64251 chr9 71851087 71851087 1 + C A PAAD 71851083 + 71851063 71851103 41 GTAGACACACTGTATGACGGCAAGCTGGGCAACTGGCTGGC GTAGACACACTGTATGACGGCAAGATGGGCAACTGGCTGGC < 41bp 0.337517249487237 0.749617889728333 0.28364348 0.33149207 prediction 0.499235779456667 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71851083 chr9:71851087 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_108494 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr9:71851066-71851107
64251 chr3 49742579 49742579 1 + C T SKCM 49742578 + 49742558 49742598 41 ACCTCGGAGAAAGTGAAGGTCCGCACGCTGAGCGTGGAGCA ACCTCGGAGAAAGTGAAGGTCTGCACGCTGAGCGTGGAGCA < 41bp 0.519151278996124 0.768768843107463 0.20569652 0.32740873 prediction 0.499235128222679 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742578 chr3:49742579 nonsynonymous SNV 0.947 3 22 hm5C_associated_SNPs_108495 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:49742560-49742580
64251 chr9 135930121 135930121 1 + T G LUSC 135930119 + 135930099 135930139 41 CCAGCCAGCTTGTCACCATGCATGACCTGAAGCAGGGCCTG CCAGCCAGCTTGTCACCATGCAGGACCTGAAGCAGGGCCTG < 41bp 0.642177860970083 0.891791767813345 0.2649619 0.71999025 prediction 0.499227813686524 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135930119 chr9:135930121 nonsynonymous SNV 0.949 0 23 hm5C_associated_SNPs_108498 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:135930104-135930124
64251 chr17 80708642 80708642 1 + C A rs202198258 80708638 + 80708618 80708658 41 GGCTGCTCAAGTAGCGGCCCCTGCCCTCCCTTCCCCTGTCC GGCTGCTCAAGTAGCGGCCCCTGCACTCCCTTCCCCTGTCC < 41bp 0.369396887227824 0.749593359323493 0.02801469 0.11459574 prediction 0.499186718646986 Functional Gain - FN3K ENSG00000167363 UTR3 Human protein_coding chr17:80708638 chr17:80708642 . . 0 25 hm5C_associated_SNPs_108501 0 0 2 CSTF2T POSTAR2 ENCODE chr17:80708635-80708782
64251 chr13 114292057 114292057 1 + T C CESC 114292055 + 114292035 114292075 41 GTCTGTCCTGTGGAACTGCGCGTCATTTTGTTGGTTGCCTG GTCTGTCCTGTGGAACTGCGCGCCATTTTGTTGGTTGCCTG < 41bp 0.54565938924512 0.7952514044162 0.16233182 0.14928424 prediction 0.49918403034216 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292055 chr13:114292057 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_108502 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr13:114292039-114292067
64251 chr11 63668341 63668341 1 + C G rs533394471 63668340 + 63668320 63668360 41 ACTCCCTGACTACAAGGACCCCCGGCGGACAGGTGAGGCTG ACTCCCTGACTACAAGGACCCGCGGCGGACAGGTGAGGCTG < 41bp 0.432056861242385 0.749590980931332 0.8282329 0.8992524 prediction 0.499181961862664 Functional Gain - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63668340 chr11:63668341 synonymous SNV . 0 22 hm5C_associated_SNPs_108503 0 0 9 BUD13 POSTAR2 ENCODE chr11:63668294-63668352
64251 chr4 79832762 79832762 1 + C G GBM 79832758 + 79832738 79832778 41 CGCACTCCAGAGAGGGCTCGCAGGCACAAAAAAGTGGGCCG CGCACTCCAGAGAGGGCTCGCAGGGACAAAAAAGTGGGCCG < 41bp 0.466225630570484 0.749586385011907 0.84541136 0.91336596 prediction 0.499172770023815 Functional Gain - BMP2K ENSG00000138756 CDS Human protein_coding chr4:79832758 chr4:79832762 nonsynonymous SNV 0.972 4 25 hm5C_associated_SNPs_108505 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:79832761-79832762
64251 chr16 31230697 31230697 1 + C A rs115885262 31230696 + 31230676 31230716 41 GCACTGGAGGGCTCCTTGGACCGCGAGGCAGAGCGTGTACG GCACTGGAGGGCTCCTTGGACAGCGAGGCAGAGCGTGTACG < 41bp 0.489112681013322 0.749583617618119 0.115567 0.38804138 prediction 0.499167235236239 Functional Gain - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31230696 chr16:31230697 nonsynonymous SNV 0.340 0 22 hm5C_associated_SNPs_108507 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:31230664-31230705
64251 chr18 12325306 12325306 1 + C T SKCM 12325305 + 12325285 12325325 41 CCTTCAGCGTCATGCCCTCGCCCAAGGTGTCGGACACGGTG CCTTCAGCGTCATGCCCTCGCTCAAGGTGTCGGACACGGTG < 41bp 0.499012817817458 0.749567107785002 0.01562798 0.022117287 prediction 0.499134215570004 Functional Gain - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325305 chr18:12325306 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_108513 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:12325259-12325321
64251 chr7 128498142 128498142 1 + C A COAD 128498141 + 128498121 128498161 41 GTGACCAAGTCCTCCTCAAGCCGGGGCTCCAGCTACAGCTC GTGACCAAGTCCTCCTCAAGCAGGGGCTCCAGCTACAGCTC < 41bp 0.500656022469044 0.750206456225838 0.93705785 0.95147586 prediction 0.499100867513589 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128498141 chr7:128498142 synonymous SNV . 0 22 hm5C_associated_SNPs_108518 0 0 1 DDX6 POSTAR2 ENCODE chr7:128498137-128498174
64251 chr4 159791570 159791570 1 + T G DLBC 159791567 + 159791547 159791587 41 CTTGTGCTTCATGGGACCGGCAGTGATGAGAAGCTGAAGCA CTTGTGCTTCATGGGACCGGCAGGGATGAGAAGCTGAAGCA < 41bp 0.351816321358897 0.74954121843509 0.37952048 0.88355994 prediction 0.499082436870181 Functional Gain - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159791567 chr4:159791570 nonsynonymous SNV 0.973 2 24 hm5C_associated_SNPs_108519 0 0 2 GRWD1 POSTAR2 ENCODE chr4:159791526-159791622
64251 chr11 18631459 18631459 1 - A G UCEC 18631461 - 18631441 18631481 41 AGGACTTAGAGGAAATGAGACGTGAAGAAGAAGAAATGCAA AGGACTTAGAGGAAATGAGACGCGAAGAAGAAGAAATGCAA < 41bp 0.552577300592661 0.802114958662419 0.66958183 0.48627317 prediction 0.499075316139516 Functional Gain - SPTY2D1 ENSG00000179119 CDS Human protein_coding chr11:18631461 chr11:18631459 synonymous SNV . 0 23 hm5C_associated_SNPs_108521 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr11:18631440-18631460
64251 chr7 73973279 73973279 1 + C T SKCM 73973278 + 73973258 73973298 41 CGTGATCATCGAGGGGCTGCCCCCAGGAATCCCGTTCCGAA CGTGATCATCGAGGGGCTGCCTCCAGGAATCCCGTTCCGAA < 41bp 0.57006013540034 0.819596094710741 0.12713072 0.9487842 prediction 0.499071918620803 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73973278 chr7:73973279 synonymous SNV . 0 22 hm5C_associated_SNPs_108522 0 0 1 YBX3 POSTAR2 ENCODE chr7:73973244-73973310
64251 chr3 16347043 16347043 1 + C G rs186211228 16347042 + 16347022 16347062 41 AAGAACATTTTCAGGTCTAGCCGAGAATGTCCTCTTGCTCT AAGAACATTTTCAGGTCTAGCGGAGAATGTCCTCTTGCTCT < 41bp 0.506373897763539 0.755905613951787 0.80737984 0.9074621 prediction 0.499063432376496 Functional Gain - OXNAD1 ENSG00000154814 UTR3 Human protein_coding chr3:16347042 chr3:16347043 . . 0 22 hm5C_associated_SNPs_108523 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:16347004-16347047
64251 chr6 43271882 43271882 1 + T C LUAD 43271880 + 43271860 43271900 41 GCTGTCACTGCCCAAGCTTACTTATGGGGGGATCGCCCTGC GCTGTCACTGCCCAAGCTTACTCATGGGGGGATCGCCCTGC < 41bp 0.485139557069434 0.749516758571638 0.14035997 0.11041197 prediction 0.499033517143277 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43271880 chr6:43271882 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_108527 0 0 2 NKRF POSTAR2 ENCODE chr6:43271779-43271921
64251 chr11 2415337 2415337 1 + T G STAD 2415335 + 2415315 2415355 41 TCCCCGCAAGGCATCTACATCCTCATCGCTGTGGGCGCTGT TCCCCGCAAGGCATCTACATCCGCATCGCTGTGGGCGCTGT < 41bp 0.409567900101136 0.749491700054937 0.0693582 0.1922718 prediction 0.498983400109874 Functional Gain - CD81 ENSG00000110651 CDS Human protein_coding chr11:2415335 chr11:2415337 nonsynonymous SNV 0.967 5 23 hm5C_associated_SNPs_108532 0 0 14 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:2415320-2415340
64251 chr4 6884388 6884388 1 + C G rs571163937 6884384 + 6884364 6884404 41 TGTGTGTGTGTGCGCGCGTGCGCGCGCGCATGTGTAAGGTT TGTGTGTGTGTGCGCGCGTGCGCGGGCGCATGTGTAAGGTT < 41bp 0.548534173313685 0.798022288890149 0.27534905 0.7317146 prediction 0.49897623115293 Functional Gain - KIAA0232 ENSG00000170871 UTR3 Human protein_coding chr4:6884384 chr4:6884388 . . 0 25 hm5C_associated_SNPs_108533 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr4:6884383-6884417
64251 chr1 60287594 60287594 1 + T C LIHC 60287592 + 60287572 60287612 41 CAGCTGACTAGTGGAGTTGCCATGGCACAAGTTCTTCATCA CAGCTGACTAGTGGAGTTGCCACGGCACAAGTTCTTCATCA < 41bp 0.477345641742976 0.749482952843433 0.42379752 0.5021471 prediction 0.498965905686866 Functional Gain - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60287592 chr1:60287594 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_108534 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:60287556-60287608
64251 chr17 40997011 40997011 1 + T C KIRC 40997009 + 40996989 40997029 41 CCTGCCCGGGAGGCACTGGCCATCGTCCTCTTTGGTGGACA CCTGCCCGGGAGGCACTGGCCACCGTCCTCTTTGGTGGACA < 41bp 0.508708213773563 0.758189507592985 0.11110857 0.10296896 prediction 0.498962587638844 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997009 chr17:40997011 nonsynonymous SNV 0.922 1 23 hm5C_associated_SNPs_108535 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:40997000-40997040
64251 chr6 13601090 13601090 1 + C G OV 13601089 + 13601069 13601109 41 GGCACTTCCTCTGTGGTGTACCCAGCAGCCATGTTTGCCCC GGCACTTCCTCTGTGGTGTACGCAGCAGCCATGTTTGCCCC < 41bp 0.426372684165042 0.749455831995486 0.14402926 0.34552252 prediction 0.498911663990972 Functional Gain - SIRT5 ENSG00000124523 CDS Human protein_coding chr6:13601089 chr6:13601090 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_108544 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221660 chr6:13601090-13601091
64251 chrX 151821166 151821166 1 + C A rs200635320 151821165 + 151821145 151821185 41 CCACTCACTTCTCTCTCAGGCCAGGCCCCCCTGGCCACTGG CCACTCACTTCTCTCTCAGGCAAGGCCCCCCTGGCCACTGG < 41bp 0.503856310086599 0.753309419170024 0.03663662 0.1854555 prediction 0.49890621816685 Functional Gain - GABRQ ENSG00000147402 CDS Human other chrX:151821165 chrX:151821166 nonsynonymous SNV 0.579 0 22 hm5C_associated_SNPs_108545 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:151821143-151821183
64251 chr15 74290715 74290715 1 + C G BLCA 74290711 + 74290691 74290731 41 TCAAGCACGAGGCCCGGCCCCTAGCAGAGCTGCGCAACCAG TCAAGCACGAGGCCCGGCCCCTAGGAGAGCTGCGCAACCAG < 41bp 0.546806080202978 0.796251720651697 0.09108436 0.31106424 prediction 0.498891280897437 Functional Gain - PML ENSG00000140464 CDS Human protein_coding chr15:74290711 chr15:74290715 nonsynonymous SNV 0.723 1 25 hm5C_associated_SNPs_108546 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:74290715-74290716
64251 chr12 112924348 112924348 1 + C T SKCM 112924347 + 112924327 112924367 41 GACCACGGCGTGCCCAGCGACCCTGGGGGCGTGCTGGACTT GACCACGGCGTGCCCAGCGACTCTGGGGGCGTGCTGGACTT < 41bp 0.485439935408998 0.749443713871139 0.28586513 0.29787585 prediction 0.498887427742278 Functional Gain - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112924347 chr12:112924348 nonsynonymous SNV 0.950 5 22 hm5C_associated_SNPs_108547 0 0 9 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr12:112924337-112924358
64251 chr19 46181212 46181212 1 + C A COAD 46181208 + 46181188 46181228 41 ATTCTTGGCATTCTCCTGTCCAAGCTGAGGACACGGCAAAT ATTCTTGGCATTCTCCTGTCCAAGATGAGGACACGGCAAAT < 41bp 0.336905238960991 0.749442209878719 0.2740019 0.3233263 prediction 0.498884419757438 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46181208 chr19:46181212 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_108548 0 0 3 DDX24 POSTAR2 ENCODE chr19:46181198-46181235
64251 chr12 110783812 110783812 1 + C G rs144955024 110783811 + 110783791 110783831 41 CTCCTTGCTCTGCAGCTTGTCCGAAAACCAGTCCTTGCTGA CTCCTTGCTCTGCAGCTTGTCGGAAAACCAGTCCTTGCTGA < 41bp 0.430737221681753 0.749409053033599 0.03640288 0.5201033 prediction 0.498818106067197 Functional Gain - ATP2A2 ENSG00000174437 CDS Human protein_coding chr12:110783811 chr12:110783812 synonymous SNV . 0 22 hm5C_associated_SNPs_108553 0 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:110783800-110783820
64251 chr15 44159856 44159856 1 + C G rs556895051 44159855 + 44159835 44159875 41 AAGGCCCCAGGCTTACCTGTCCCGATCTTTAAACTGTCCGA AAGGCCCCAGGCTTACCTGTCGCGATCTTTAAACTGTCCGA < 41bp 0.543664043952083 0.793071346329396 0.06765014 0.31605428 prediction 0.498814604754627 Functional Gain - WDR76 ENSG00000092470 UTR3 Human protein_coding chr15:44159855 chr15:44159856 . . 0 22 hm5C_associated_SNPs_108554 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:44159797-44159860
64251 chr1 46158923 46158923 1 + T A SKCM 46158919 + 46158899 46158939 41 GGGACTAAGAACCAGCAGAACAGATATACTTTCTCTCAAGA GGGACTAAGAACCAGCAGAACAGAAATACTTTCTCTCAAGA < 41bp 0.445114491623554 0.749405465682844 0.7334828 0.6193247 prediction 0.498810931365689 Functional Gain - TMEM69 ENSG00000159596 CDS Human protein_coding chr1:46158919 chr1:46158923 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_108555 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:46158876-46158935
64251 chr1 10659338 10659338 1 + C G rs41274482 10659334 + 10659314 10659354 41 TGATATGGCCTTCCAGCAGTCGGGCACTGCTGCCGATGAGC TGATATGGCCTTCCAGCAGTCGGGGACTGCTGCCGATGAGC < 41bp 0.583535297107402 0.832933290767987 0.85385 0.93982863 prediction 0.498795987321169 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10659334 chr1:10659338 synonymous SNV . 0 25 hm5C_associated_SNPs_108557 2 0 7 BUD13 POSTAR2 ENCODE chr1:10659311-10659385
64251 chr13 111927942 111927942 1 + C T UCEC 111927941 + 111927921 111927961 41 CAGATCCTGACGGAAGCCATCCGGAACTGGGAGGGCGATGA CAGATCCTGACGGAAGCCATCTGGAACTGGGAGGGCGATGA < 41bp 0.492360462134194 0.749394932306077 0.43894234 0.3252178 prediction 0.498789864612153 Functional Gain - ARHGEF7 ENSG00000102606 CDS Human protein_coding chr13:111927941 chr13:111927942 nonsynonymous SNV 0.198 4 22 hm5C_associated_SNPs_108559 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:111927936-111927957
64251 chr2 47690292 47690292 1 + T C LUAD 47690290 + 47690270 47690310 41 TAATAAGTGCAGCCAGAGATCTTGGTAAGAATGGGTCATTG TAATAAGTGCAGCCAGAGATCTCGGTAAGAATGGGTCATTG < 41bp 0.547988351595601 0.797366888204873 0.1767523 0.39546305 prediction 0.498757073218544 Functional Gain - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47690290 chr2:47690292 synonymous SNV . 0 23 hm5C_associated_SNPs_108562 0 0 5 DDX24 POSTAR2 ENCODE chr2:47690224-47690293
64251 chr1 111435051 111435051 1 + C A COAD 111435047 + 111435027 111435067 41 GTGCTCTTCCATAACCTCCCCTCCCTCACGCTGGGCAATGT GTGCTCTTCCATAACCTCCCCTCCATCACGCTGGGCAATGT < 41bp 0.308392875627514 0.749374743233512 0.070745796 0.9149546 prediction 0.498749486467025 Functional Gain - CD53 ENSG00000143119 CDS Human protein_coding chr1:111435047 chr1:111435051 nonsynonymous SNV 0.570 2 25 hm5C_associated_SNPs_108563 0 0 2 RPS3 POSTAR2 ENCODE chr1:111434986-111435066
64251 chr17 33326452 33326452 1 + T C COAD 33326450 + 33326430 33326470 41 CGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGT CGCCTGCAGAATGAACTAGACACGGTGAAGATCAGCAAGGT < 41bp 0.547532902018699 0.796903845280514 0.27100956 0.42649233 prediction 0.498741886523628 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33326450 chr17:33326452 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_108564 0 0 3 FXR2 POSTAR2 ENCODE chr17:33326341-33326461
64251 chr12 58121198 58121198 1 - G T LUAD 58121199 - 58121179 58121219 41 ATTGGCAACGACACGGCCAACCGCGTGTGGGAAAGCGACAC ATTGGCAACGACACGGCCAACAGCGTGTGGGAAAGCGACAC < 41bp 0.502272939983406 0.751639811279686 0.08470392 0.08460662 prediction 0.49873374259256 Functional Gain - AGAP2 ENSG00000135439;ENSG00000255737 CDS Human other chr12:58121199 chr12:58121198 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_108567 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:58121190-58121209
64251 chr10 3178905 3178905 1 + T A rs7673 3178901 + 3178881 3178921 41 CGGCGAGTGCCCATCTGCCCCACCTGCTCCAGTGCGTGCTG CGGCGAGTGCCCATCTGCCCCACCAGCTCCAGTGCGTGCTG < 41bp 0.444207941743981 0.749362777980101 0.031430423 0.06728843 prediction 0.498725555960202 Functional Gain - PFKP ENSG00000067057 UTR3 Human protein_coding chr10:3178901 chr10:3178905 . . 0 25 hm5C_associated_SNPs_108568 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr10:3178894-3178915
64251 chr2 73478496 73478496 1 + T A LAML 73478492 + 73478472 73478512 41 CCTTGGAGATTATCCCACGCCAGCTGTGTGACAATGCTGGC CCTTGGAGATTATCCCACGCCAGCAGTGTGACAATGCTGGC < 41bp 0.629306959595703 0.878666777552623 0.22849086 0.1227777 prediction 0.49871963591384 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73478492 chr2:73478496 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_108570 0 0 14 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:73478420-73478500
64251 chr16 8829607 8829607 1 + T G PAAD 8829604 + 8829584 8829624 41 CCCTCAAGGGGTCATGGCCTCCATGTTGCTCGCCCAGCGCC CCCTCAAGGGGTCATGGCCTCCAGGTTGCTCGCCCAGCGCC < 41bp 0.346054357743824 0.749342375624814 0.16517612 0.8809441 prediction 0.498684751249628 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8829604 chr16:8829607 nonsynonymous SNV 0.562 0 24 hm5C_associated_SNPs_108574 0 0 2 DDX3X POSTAR2 ENCODE chr16:8829557-8829662
64251 chr1 203040874 203040874 1 + C T STAD 203040873 + 203040853 203040893 41 CTGTTGGCCTTGGGCACAGACCGGAAGCTGGATGACGTGAG CTGTTGGCCTTGGGCACAGACTGGAAGCTGGATGACGTGAG < 41bp 0.510493400486786 0.759833251756388 0.7147807 0.6018691 prediction 0.498679702539204 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203040873 chr1:203040874 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_108575 0 0 2 DDX24 POSTAR2 ENCODE chr1:203040852-203040885
64251 chr5 156816275 156816275 1 + C T LIHC 156816274 + 156816254 156816294 41 CTGTCCATGTTCGAGGTCATCCTGACCCGCATTCGGAGCTA CTGTCCATGTTCGAGGTCATCTTGACCCGCATTCGGAGCTA < 41bp 0.510495415590829 0.759806277971976 0.036866963 0.12780622 prediction 0.498621724762294 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816274 chr5:156816275 synonymous SNV . 0 22 hm5C_associated_SNPs_108578 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:156816260-156816283
64251 chr10 3189817 3189817 1 - G T LUSC 3189818 - 3189798 3189838 41 TACGCATCCATCAGGGCAGGCCGGACCCTCACGCCCGCAGG TACGCATCCATCAGGGCAGGCAGGACCCTCACGCCCGCAGG < 41bp 0.522881224364259 0.772190189311325 0.5295442 0.81161517 prediction 0.498617929894132 Functional Gain - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189818 chr10:3189817 synonymous SNV . 0 22 hm5C_associated_SNPs_108580 0 0 4 FMR1 POSTAR2 ENCODE chr10:3189763-3189838
64251 chr14 77236309 77236309 1 + C T SKCM 77236308 + 77236288 77236328 41 CTCTTTCTCTGTCCCCAGATCCCCATACCGAGTGTGCCTAC CTCTTTCTCTGTCCCCAGATCTCCATACCGAGTGTGCCTAC < 41bp 0.475823999876117 0.749304549664695 0.29266387 0.95837915 prediction 0.498609099329389 Functional Gain - VASH1 ENSG00000071246 CDS Human protein_coding chr14:77236308 chr14:77236309 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_108581 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:77236288-77236326
64251 chr19 804954 804954 1 + C G rs374562787 804953 + 804933 804973 41 CAAGCTGGTGAGTGGGGCTCCCGGGACGGCGCCCGCCCTGG CAAGCTGGTGAGTGGGGCTCCGGGGACGGCGCCCGCCCTGG < 41bp 0.572694417606937 0.821989298799041 0.9322594 0.93991274 prediction 0.498589762384208 Functional Gain - MIR4745 ENSG00000265767 ncRNA_exonic Human other chr19:804953 chr19:804954 . . 0 22 hm5C_associated_SNPs_108584 0 0 8 SSB POSTAR2 GSE95683,GSM2521599 chr19:804940-804960
64251 chr16 85840359 85840359 1 + C A THCA 85840355 + 85840335 85840375 41 ACACCGTAGTGTACGGCCCCCTCCCGCAAAGCTTTGACAAA ACACCGTAGTGTACGGCCCCCTCCAGCAAAGCTTTGACAAA < 41bp 0.654201084578852 0.903481270135021 0.035533905 0.9542278 prediction 0.498560371112339 Functional Gain - COX4I1 ENSG00000131143 CDS Human protein_coding chr16:85840355 chr16:85840359 nonsynonymous SNV 0.626 4 25 hm5C_associated_SNPs_108588 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:85840340-85840380
64251 chr4 17841393 17841393 1 + T C UCEC 17841391 + 17841371 17841411 41 ATTCGAGTCTATACAAAAGCCTTGAGTTCTTTAGAACTCAG ATTCGAGTCTATACAAAAGCCTCGAGTTCTTTAGAACTCAG < 41bp 0.58947239805902 0.838746820935706 0.10662073 0.32832596 prediction 0.498548845753371 Functional Gain - NCAPG ENSG00000109805 CDS Human protein_coding chr4:17841391 chr4:17841393 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_108589 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:17841356-17841412
64251 chr17 78091445 78091445 1 + C T SKCM 78091444 + 78091424 78091464 41 TCCCACCCCCACCTGCAGCTCCCCGTGAGCCAGCCATCCAC TCCCACCCCCACCTGCAGCTCTCCGTGAGCCAGCCATCCAC < 41bp 0.510786768712569 0.760046552939673 0.20144784 0.5264448 prediction 0.498519568454207 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78091444 chr17:78091445 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_108592 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:78091406-78091459
64251 chr22 39120346 39120346 1 + C T SKCM 39120345 + 39120325 39120365 41 CTGCTGAAGTCACCAGGCTGCCGGAAGATCCCCGTGCTGGT CTGCTGAAGTCACCAGGCTGCTGGAAGATCCCCGTGCTGGT < 41bp 0.498530248092867 0.749249002599775 0.69546455 0.32721955 prediction 0.49849800519955 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39120345 chr22:39120346 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108594 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:39120325-39120363
64251 chrX 77359863 77359863 1 + T G STAD 77359860 + 77359840 77359880 41 GTCGCTTTCTAACAAGCTGACGCTGGACAAGCTGGACGTTA GTCGCTTTCTAACAAGCTGACGCGGGACAAGCTGGACGTTA < 41bp 0.37355564558753 0.749239394714143 0.15911731 0.38412413 prediction 0.498478789428285 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77359860 chrX:77359863 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_108595 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:77359773-77359867
64251 chr8 61533344 61533344 1 + C G MESO 61533340 + 61533320 61533360 41 TGCTGTTGAGTCTGTTTTTACTGTCTAGCTGCCCAACGGGG TGCTGTTGAGTCTGTTTTTACTGTGTAGCTGCCCAACGGGG < 41bp 0.466154138406595 0.749238805270774 0.11425993 0.09469667 prediction 0.498477610541547 Functional Gain - RAB2A ENSG00000104388 CDS Human protein_coding chr8:61533340 chr8:61533344 synonymous SNV . 0 25 hm5C_associated_SNPs_108596 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:61533322-61533360
64251 chr18 72173231 72173231 1 + C A LUSC 72173230 + 72173210 72173250 41 TGGGACAGCGAGCCCTTCACCCTGGTGGAGCGAGACGGTGA TGGGACAGCGAGCCCTTCACCATGGTGGAGCGAGACGGTGA < 41bp 0.515096475832563 0.76433036338881 0.2323536 0.43486196 prediction 0.498467775112494 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72173230 chr18:72173231 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_108598 0 0 3 RPS3 POSTAR2 ENCODE chr18:72173180-72173248
64251 chr7 127231141 127231141 1 + C G LUSC 127231137 + 127231117 127231157 41 GGCTACAGCACTTACGCAGCCGCACGGTAGGGGTCCTGCCC GGCTACAGCACTTACGCAGCCGCAGGGTAGGGGTCCTGCCC < 41bp 0.55872206601687 0.807931840048787 0.0974333 0.22966444 prediction 0.498419548063834 Functional Gain - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127231137 chr7:127231141 nonsynonymous SNV 0.972 1 25 hm5C_associated_SNPs_108600 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:127231125-127231142
64251 chr10 74882006 74882006 1 + T G UCEC 74882003 + 74881983 74882023 41 GATTCTGTGCTGATTGGATGCTCTGAGCAGCAGGAAGCATG GATTCTGTGCTGATTGGATGCTCGGAGCAGCAGGAAGCATG < 41bp 0.465853449821929 0.749207610680387 0.16124758 0.22216088 prediction 0.498415221360774 Functional Gain - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74882003 chr10:74882006 synonymous SNV . 0 24 hm5C_associated_SNPs_108601 0 0 1 PRPF8 POSTAR2 ENCODE chr10:74882000-74882072
64251 chr19 41268941 41268941 1 + C G LUSC 41268937 + 41268917 41268957 41 ATCCCACCAGGGGCCATGCCCCCGCAGCAGCTTATGCCAGG ATCCCACCAGGGGCCATGCCCCCGGAGCAGCTTATGCCAGG < 41bp 0.558903190362349 0.808108938430906 0.28709757 0.29645482 prediction 0.498411496137114 Functional Gain - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41268937 chr19:41268941 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_108602 0 0 3 DDX55 POSTAR2 ENCODE chr19:41268935-41268969
64251 chr19 46375364 46375364 1 + T C rs566369055 46375362 + 46375342 46375382 41 CCGGTGACCCCAGTGCCCACCATGGCCCCCCTCAACTCCTA CCGGTGACCCCAGTGCCCACCACGGCCCCCCTCAACTCCTA < 41bp 0.503533813563146 0.752731800173213 0.019800752 0.040439308 prediction 0.498395973220136 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375362 chr19:46375364 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_108605 0 0 2 BUD13 POSTAR2 ENCODE chr19:46375310-46375381
64251 chr7 7612316 7612316 1 + T G LUSC 7612314 + 7612294 7612334 41 TGAAATGTGTTGCCTGGTATCTTAATTATGATCCTGAATGT TGAAATGTGTTGCCTGGTATCTGAATTATGATCCTGAATGT < 41bp 0.607449917081507 0.856647232253041 0.021667004 0.08438742 prediction 0.498394630343069 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7612314 chr7:7612316 synonymous SNV . 0 23 hm5C_associated_SNPs_108606 0 0 11 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:7612217-7612346
64251 chrX 51639896 51639896 1 + C G CESC 51639892 + 51639872 51639912 41 GGCAGAATCCACCTGGATGGCAGACTCCACCTGGATGGCAG GGCAGAATCCACCTGGATGGCAGAGTCCACCTGGATGGCAG < 41bp 0.466105325888875 0.74919549424023 0.40410525 0.5694601 prediction 0.49839098848046 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51639892 chrX:51639896 nonsynonymous SNV 0.983 0 25 hm5C_associated_SNPs_108607 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:51639880-51639900
64251 chr5 637827 637827 1 + T C UCEC 637825 + 637805 637845 41 TCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTC TCCTCCGTGCCCAAGGAGAGCCCGAGCAGACAGGACAGCTC < 41bp 0.503533203223387 0.752691155650797 0.15264416 0.1608549 prediction 0.49831590485482 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:637825 chr5:637827 nonsynonymous SNV 0.001 3 23 hm5C_associated_SNPs_108612 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:637820-637860
64251 chr11 76507583 76507583 1 + T C COAD 76507581 + 76507561 76507601 41 CACCTCCCGGCACTGCAGAGCGTCAGCGTGGGCCAGGATGT CACCTCCCGGCACTGCAGAGCGCCAGCGTGGGCCAGGATGT < 41bp 0.514326240675358 0.763476731780327 0.33808047 0.54538643 prediction 0.498300982209937 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507581 chr11:76507583 nonsynonymous SNV 0.227 1 23 hm5C_associated_SNPs_108613 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:76507503-76507585
64251 chr20 45354654 45354654 1 + C T STAD 45354653 + 45354633 45354673 41 GCCGTGCCCATGGACTCAGGCCCAAGCTGTCTGGCTGTGCC GCCGTGCCCATGGACTCAGGCTCAAGCTGTCTGGCTGTGCC < 41bp 0.524715703337999 0.773852205101424 0.036059976 0.13133967 prediction 0.498273003526849 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354653 chr20:45354654 nonsynonymous SNV 0.031 0 22 hm5C_associated_SNPs_108616 0 0 2 SND1 POSTAR2 ENCODE chr20:45354471-45354689
64251 chr4 6925405 6925405 1 + C T SKCM 6925404 + 6925384 6925424 41 CAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAG CAGTCCGACTCCGACCTCATCTCCGAGCGGGCCTTCCAGAG < 41bp 0.518049349902919 0.767183580435197 0.19531849 0.91194165 prediction 0.498268461064556 Functional Gain - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:6925404 chr4:6925405 nonsynonymous SNV 0.036 1 22 hm5C_associated_SNPs_108619 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr4:6925404-6925405
64251 chr2 27150172 27150172 1 + C T SKCM 27150171 + 27150151 27150191 41 GAGAAGGGTGTCAACTCGTTCCAGATGTTCATGACCTACAA GAGAAGGGTGTCAACTCGTTCTAGATGTTCATGACCTACAA < 41bp 0.488487759081109 0.749116497357725 0.3977077 0.3088202 prediction 0.498232994715449 Functional Gain - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27150171 chr2:27150172 stopgain 0.997 1 22 hm5C_associated_SNPs_108624 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27150153-27150241
64251 chr15 67457672 67457672 1 + C T SKCM 67457671 + 67457651 67457691 41 ACGACTACAGCCATTCCATCCCCGAAAACACTAACTTCCCC ACGACTACAGCCATTCCATCCTCGAAAACACTAACTTCCCC < 41bp 0.561711339511139 0.810790367154249 0.094715744 0.89352113 prediction 0.49815805528622 Functional Gain - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67457671 chr15:67457672 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_108629 0 0 2 GRWD1 POSTAR2 ENCODE chr15:67457672-67457705
64251 chr16 1396058 1396058 1 + C A LUSC 1396054 + 1396034 1396074 41 GGTGGACACTCAGCCAGGGGCGGCCGGTGAAGCAGTGAGCG GGTGGACACTCAGCCAGGGGCGGCAGGTGAAGCAGTGAGCG < 41bp 0.339119944322647 0.749075305817515 0.47084653 0.7234726 prediction 0.498150611635031 Functional Gain - BAIAP3 ENSG00000007516 CDS Human protein_coding chr16:1396054 chr16:1396058 synonymous SNV . 0 25 hm5C_associated_SNPs_108630 0 0 1 PPIG POSTAR2 ENCODE chr16:1396035-1396075
64251 chr19 1026653 1026653 1 + C A rs532321155 1026649 + 1026629 1026669 41 TGCGGCCCCGTCCCGCCGCCCGCCCGCCAGCCATGAGCTCC TGCGGCCCCGTCCCGCCGCCCGCCAGCCAGCCATGAGCTCC < 41bp 0.545475377163439 0.794528065798623 0.04548061 0.06356296 prediction 0.49810537727037 Functional Gain - CNN2 ENSG00000064666 UTR5 Human protein_coding chr19:1026649 chr19:1026653 . . 0 25 hm5C_associated_SNPs_108638 0 0 5 DDX3X POSTAR2 ENCODE chr19:1026617-1026675
64251 chr2 85857929 85857929 1 + T C UCEC 85857927 + 85857907 85857947 41 AAACGTCCTCCAGGGGATATCATGTTCTTGTTGGTCCAGCG AAACGTCCTCCAGGGGATATCACGTTCTTGTTGGTCCAGCG < 41bp 0.474948462493968 0.74904720232781 0.22762161 0.2195639 prediction 0.498094404655621 Functional Gain - USP39 ENSG00000168883 CDS Human protein_coding chr2:85857927 chr2:85857929 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_108640 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:85857896-85858064
64251 chr8 67341996 67341996 1 + C G rs34322476 67341992 + 67341972 67342012 41 CAGCGCGGCCGGCTTGCACCCTACCGGACACCAGAGTAAGG CAGCGCGGCCGGCTTGCACCCTACGGGACACCAGAGTAAGG < 41bp 0.480619544572341 0.749034914408782 0.06330809 0.049844205 prediction 0.498069828817564 Functional Gain - RRS1 ENSG00000179041 CDS Human protein_coding chr8:67341992 chr8:67341996 synonymous SNV . 0 25 hm5C_associated_SNPs_108642 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:67341980-67342000
64251 chr19 37853563 37853563 1 + T C COAD 37853561 + 37853541 37853581 41 TTTGGCAGTATGTCAGTCCTCATCAAAAACCCAAGGACACA TTTGGCAGTATGTCAGTCCTCACCAAAAACCCAAGGACACA < 41bp 0.493221403288131 0.74902779996857 0.13044563 0.31807894 prediction 0.498055599937139 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853561 chr19:37853563 nonsynonymous SNV 0.637 0 23 hm5C_associated_SNPs_108644 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37853514-37853577
64251 chr14 101195299 101195299 1 + T A LUSC 101195295 + 101195275 101195315 41 GCCAGCCTGGCTGGCAGGGTCCCCTTTGTGACCAGTGCGTG GCCAGCCTGGCTGGCAGGGTCCCCATTGTGACCAGTGCGTG < 41bp 0.409882949983232 0.749003547619607 0.04016474 0.042856663 prediction 0.498007095239214 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195295 chr14:101195299 nonsynonymous SNV 0.974 2 25 hm5C_associated_SNPs_108651 0 0 14 BUD13 POSTAR2 ENCODE chr14:101195259-101195299
64251 chr19 42828943 42828943 1 + C G rs540616003 42828939 + 42828919 42828959 41 CTCCCGCTGTTCCGTGACCTCCGGCCCCCTGGCCCCCTTCG CTCCCGCTGTTCCGTGACCTCCGGGCCCCTGGCCCCCTTCG < 41bp 0.552165484059926 0.80115916383552 0.74934155 0.8967354 prediction 0.497987359551187 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42828939 chr19:42828943 nonsynonymous SNV 0.979 1 25 hm5C_associated_SNPs_108653 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:42828934-42828966
64251 chr3 9974953 9974953 1 + C G CESC 9974949 + 9974929 9974969 41 GCACGACGCCTTCCGCGCCTCGCTCAGCTGCGTGCTGCCCG GCACGACGCCTTCCGCGCCTCGCTGAGCTGCGTGCTGCCCG < 41bp 0.527364302385955 0.776354789279992 0.08108911 0.65167093 prediction 0.497980973788074 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9974949 chr3:9974953 synonymous SNV . 0 25 hm5C_associated_SNPs_108654 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:9974930-9974972
64251 chrX 152774698 152774698 1 + C G rs143414019 152774694 + 152774674 152774714 41 CCTTGAGCTGGGACTGCTTTCTGTCTGTCCGGCCTGCACCC CCTTGAGCTGGGACTGCTTTCTGTGTGTCCGGCCTGCACCC < 41bp 0.493142822149225 0.748987893813004 0.059933335 0.11822137 prediction 0.497975787626009 Functional Gain - BGN ENSG00000182492 UTR3 Human protein_coding chrX:152774694 chrX:152774698 . . 0 25 hm5C_associated_SNPs_108655 0 0 2 DGCR8 POSTAR2 ENCODE chrX:152774671-152774718
64251 chr5 14664838 14664838 1 + C G rs560512097 14664837 + 14664817 14664857 41 GCGGGCCCTCGGAAACCGCCCCGGCGGCTGAGAGGCTGCGG GCGGGCCCTCGGAAACCGCCCGGGCGGCTGAGAGGCTGCGG < 41bp 0.567702998636356 0.816683236866644 0.6861693 0.8697373 prediction 0.497960476460576 Functional Gain - OTULIN ENSG00000154124 UTR5 Human protein_coding chr5:14664837 chr5:14664838 . . 0 22 hm5C_associated_SNPs_108657 0 0 3 DDX3X POSTAR2 ENCODE chr5:14664804-14664994
64251 chr15 42137955 42137955 1 + C T STAD 42137954 + 42137934 42137974 41 ATGAAGAGGCTTCCTGAGTCCCGCATCTGCTTCTTAGAAGG ATGAAGAGGCTTCCTGAGTCCTGCATCTGCTTCTTAGAAGG < 41bp 0.507126475190943 0.756099900750348 0.08167368 0.14876872 prediction 0.497946851118809 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42137954 chr15:42137955 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_108661 0 0 1 DDX24 POSTAR2 ENCODE chr15:42137925-42137960
64251 chr5 140589987 140589987 1 + T G OV 140589984 + 140589964 140590004 41 CCCGCACCTGCCCCTCGCCTCCCTGGTCTCCATCAACGCGG CCCGCACCTGCCCCTCGCCTCCCGGGTCTCCATCAACGCGG < 41bp 0.354321817558033 0.748966381767151 0.018858045 0.14466491 prediction 0.497932763534303 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589984 chr5:140589987 nonsynonymous SNV 0.000 3 24 hm5C_associated_SNPs_108664 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr16 2870969 2870969 1 + C A STAD 2870965 + 2870945 2870985 41 CGTCCGCACAGCACTGCCATCTCCCCACACCCTCCAGGAAG CGTCCGCACAGCACTGCCATCTCCACACACCCTCCAGGAAG < 41bp 0.319576911338511 0.748965261936206 0.068348885 0.9434364 prediction 0.497930523872413 Functional Gain - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2870965 chr16:2870969 synonymous SNV . 0 25 hm5C_associated_SNPs_108666 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2870925-2871034
64251 chr15 41657673 41657673 1 + C T LUAD 41657672 + 41657652 41657692 41 GACTCTCTGTGGCTTCTACTCCCATCAGCCAACGACGCTCG GACTCTCTGTGGCTTCTACTCTCATCAGCCAACGACGCTCG < 41bp 0.518576184496613 0.767530824046688 0.28038564 0.24554312 prediction 0.497909279100149 Functional Gain - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41657672 chr15:41657673 nonsynonymous SNV 0.013 4 22 hm5C_associated_SNPs_108667 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:41657646-41657684
64251 chr19 10823815 10823815 1 + C T CESC 10823814 + 10823794 10823834 41 CTGCAGCTCATGAGCGCCGTCCGCACCAGCATCGTGGAGAA CTGCAGCTCATGAGCGCCGTCTGCACCAGCATCGTGGAGAA < 41bp 0.518287067434769 0.76720996073328 0.09714359 0.18542898 prediction 0.497845786597021 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10823814 chr19:10823815 nonsynonymous SNV 0.748 3 22 hm5C_associated_SNPs_108670 0 0 1 PPIG POSTAR2 ENCODE chr19:10823797-10823819
64251 chr1 26508429 26508429 1 + T C rs375302474 26508427 + 26508407 26508447 41 AGGAGCTGAGCCAGGTCTTGCATGAGGTAGGAGAACCAAGG AGGAGCTGAGCCAGGTCTTGCACGAGGTAGGAGAACCAAGG < 41bp 0.540431872096971 0.789351610951286 0.8272337 0.87485635 prediction 0.497839477708631 Functional Gain - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26508427 chr1:26508429 synonymous SNV . 0 23 hm5C_associated_SNPs_108671 0 0 1 PPIG POSTAR2 ENCODE chr1:26508415-26508433
64251 chr21 46596307 46596307 1 + C T SKCM 46596306 + 46596286 46596326 41 GTCTTACCACCATTCCCACCCCCGAGTGGGAAGAATCCCGT GTCTTACCACCATTCCCACCCTCGAGTGGGAAGAATCCCGT < 41bp 0.491017580552576 0.748893242342684 0.019548595 0.10522869 prediction 0.497786484685368 Functional Gain - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46596306 chr21:46596307 nonsynonymous SNV 0.375 1 22 hm5C_associated_SNPs_108677 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr21:46596273-46596308
64251 chr9 135763794 135763794 1 + C G rs534480542 135763793 + 135763773 135763813 41 GAAAGAATGGATCGCCCACTCCGAGAAGTTGCCGCGCAAGG GAAAGAATGGATCGCCCACTCGGAGAAGTTGCCGCGCAAGG < 41bp 0.620292646133854 0.869163090603786 0.30047238 0.88359714 prediction 0.497740888939864 Functional Gain - SPACA9 ENSG00000165698 CDS Human protein_coding chr9:135763793 chr9:135763794 synonymous SNV . 0 22 hm5C_associated_SNPs_108685 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:135763777-135763812
64251 chr10 74034742 74034742 1 + C G CESC 74034738 + 74034718 74034758 41 CCACAGCGTGGGCCAGCTGGCACTCGACCCCAGCCTGGTGC CCACAGCGTGGGCCAGCTGGCACTGGACCCCAGCCTGGTGC < 41bp 0.551752243567641 0.800622447279691 0.097967625 0.24616355 prediction 0.497740407424101 Functional Gain - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034738 chr10:74034742 synonymous SNV . 0 25 hm5C_associated_SNPs_108686 0 0 1 YBX3 POSTAR2 ENCODE chr10:74034740-74034749
64251 chr11 65048544 65048544 1 + C A UCEC 65048543 + 65048523 65048563 41 TCAGTGATTCTCGAGGGAGACCGGGAACATTCCTCGGGTGC TCAGTGATTCTCGAGGGAGACAGGGAACATTCCTCGGGTGC < 41bp 0.536074822486979 0.784937714705039 0.91646135 0.9331758 prediction 0.497725784436121 Functional Gain - POLA2 ENSG00000014138 CDS Human protein_coding chr11:65048543 chr11:65048544 synonymous SNV . 0 22 hm5C_associated_SNPs_108690 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65048532-65048555
64251 chr22 45110520 45110520 1 + C T SKCM 45110519 + 45110499 45110539 41 CAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAA CAGCGCAAGGGGCTGCCCGACTAGGAGCTCTTCAGCCTCAA < 41bp 0.500813887989443 0.749676504040943 0.27846932 0.06974411 prediction 0.497725232103 Functional Gain - PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45110519 chr22:45110520 stopgain 1.000 0 22 hm5C_associated_SNPs_108691 0 0 2 GRWD1 POSTAR2 ENCODE chr22:45110473-45110558
64251 chr17 29036734 29036734 1 + C A rs540642135 29036730 + 29036710 29036750 41 CGCCACCTCCTACCAGCTTCCCCCCAGCCCCGGCTCCGGGA CGCCACCTCCTACCAGCTTCCCCCAAGCCCCGGCTCCGGGA < 41bp 0.36824802106819 0.74885860162581 0.02647236 0.10320553 prediction 0.497717203251621 Functional Gain - SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29036730 chr17:29036734 . . 0 25 hm5C_associated_SNPs_108692 0 0 1 HNRNPC POSTAR2 ENCODE chr17:29036645-29036734
64251 chr10 121662361 121662361 1 + T C UCEC 121662359 + 121662339 121662379 41 AGCAGCAGGTACCTGCCAGACCTGGGGCTCCCTCTGTTCAA AGCAGCAGGTACCTGCCAGACCCGGGGCTCCCTCTGTTCAA < 41bp 0.474817529877989 0.748858024143115 0.024424106 0.20975605 prediction 0.497716048286229 Functional Gain - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121662359 chr10:121662361 synonymous SNV . 0 23 hm5C_associated_SNPs_108693 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:121662348-121662374
64251 chr19 56166479 56166479 1 + C G UCEC 56166475 + 56166455 56166495 41 ACGCGGCCGCCTCAGCATGTCGGACTTCGACGAGTTCGAGC ACGCGGCCGCCTCAGCATGTCGGAGTTCGACGAGTTCGAGC < 41bp 0.565733894996105 0.814583066227367 0.40926996 0.9040623 prediction 0.497698342462524 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56166475 chr19:56166479 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_108694 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:56166400-56166500
64251 chr1 154962903 154962903 1 + C T SKCM 154962902 + 154962882 154962922 41 CACCCCCAGCTGGAGGCTGTCCTTATGGGCACCCGCCGGAC CACCCCCAGCTGGAGGCTGTCTTTATGGGCACCCGCCGGAC < 41bp 0.497065073689977 0.748833840142089 0.08482057 0.22511214 prediction 0.497667680284179 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962902 chr1:154962903 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_108698 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154962867-154962923
64251 chr6 52268045 52268045 1 + C A STAD 52268041 + 52268021 52268061 41 GCCATCTTGGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCA GCCATCTTGGAGCGCCTGAGCACCATGTCGGTCAGCGGGCA < 41bp 0.669199710628144 0.918030891506883 0.24746114 0.22648084 prediction 0.497662361757477 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268041 chr6:52268045 nonsynonymous SNV 0.958 4 25 hm5C_associated_SNPs_108700 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1486178 chr6:52268045-52268046
64251 chr8 99170302 99170302 1 + T A SKCM 99170298 + 99170278 99170318 41 CTGCCGCGTGTGACGTTGCACTGCTCCAGAACTCTCCTAGG CTGCCGCGTGTGACGTTGCACTGCACCAGAACTCTCCTAGG < 41bp 0.416059827977559 0.748799208692742 0.088118404 0.14733952 prediction 0.497598417385485 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99170298 chr8:99170302 nonsynonymous SNV 0.839 4 25 hm5C_associated_SNPs_108701 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:99170289-99170321
64251 chr16 72141583 72141583 1 + C T LUAD 72141582 + 72141562 72141602 41 GGCGGCTGATGGTGGAGTTCCCGCTGGACCCTGCCCTGTCC GGCGGCTGATGGTGGAGTTCCTGCTGGACCCTGCCCTGTCC < 41bp 0.493249149340346 0.748793049715543 0.35153052 0.2375099 prediction 0.497586099431086 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72141582 chr16:72141583 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_108702 0 0 3 FXR2 POSTAR2 ENCODE chr16:72141579-72141657
64251 chr17 57682968 57682968 1 + C T UCEC 57682967 + 57682947 57682987 41 ACATGATTTGAGCAGTGTGGCCCGACGTGAAGTGAGAGAAG ACATGATTTGAGCAGTGTGGCTCGACGTGAAGTGAGAGAAG < 41bp 0.520837996237851 0.769620328473012 0.20467073 0.22008875 prediction 0.497564664470322 Functional Gain - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57682967 chr17:57682968 synonymous SNV . 0 22 hm5C_associated_SNPs_108704 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:57682936-57682977
64251 chr19 7677137 7677137 1 + C A HNSC 7677136 + 7677116 7677156 41 TGAGGCCGGAGCGGGGTCCCCCACGTCCACTCCGGCCCCGC TGAGGCCGGAGCGGGGTCCCCAACGTCCACTCCGGCCCCGC < 41bp 0.518574128753805 0.767339606421972 0.3215499 0.49007726 prediction 0.497530955336333 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677136 chr19:7677137 synonymous SNV . 0 22 hm5C_associated_SNPs_108707 0 0 3 BUD13 POSTAR2 ENCODE chr19:7677101-7677171
64251 chr8 15531303 15531303 1 + T C COAD 15531301 + 15531281 15531321 41 GCCAGATGTGGAACCATATCCGTGGACCTCCATATGCTCAT GCCAGATGTGGAACCATATCCGCGGACCTCCATATGCTCAT < 41bp 0.571765338245315 0.82052703735575 0.47334975 0.9123713 prediction 0.49752339822087 Functional Gain - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15531301 chr8:15531303 synonymous SNV . 0 23 hm5C_associated_SNPs_108709 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:15531280-15531312
64251 chr19 15770043 15770043 1 + C A STAD 15770039 + 15770019 15770059 41 CCCTCCCCAAGGAACTGCATCGGGCAGGCGTTCGCGATGGC CCCTCCCCAAGGAACTGCATCGGGAAGGCGTTCGCGATGGC < 41bp 0.668567616707649 0.917328379320099 0.6945586 0.9007088 prediction 0.4975215252249 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15770039 chr19:15770043 nonsynonymous SNV 0.044 1 25 hm5C_associated_SNPs_108710 0 0 2 PPIG POSTAR2 ENCODE chr19:15770029-15770094
64251 chr4 159092014 159092014 1 - G C rs35431615 159092015 - 159091995 159092035 41 GGGTACGCTCAGGGAGCAAACCTGGTTAAGATTGGAGAGCG GGGTACGCTCAGGGAGCAAACGTGGTTAAGATTGGAGAGCG < 41bp 0.606865806713787 0.85560186890606 0.85817826 0.9297786 prediction 0.497472124384545 Functional Gain - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092015 chr4:159092014 nonsynonymous SNV 0.133 0 22 hm5C_associated_SNPs_108713 0 0 1 SND1 POSTAR2 ENCODE chr4:159092007-159092058
64251 chr8 27296617 27296617 1 + C T SKCM 27296616 + 27296596 27296636 41 GCTGGGGGACTTTGGTCTTTCCCGGTACATTGAGGACGAGG GCTGGGGGACTTTGGTCTTTCTCGGTACATTGAGGACGAGG < 41bp 0.505485906966895 0.754214172223531 0.26693708 0.1896429 prediction 0.49745653051327 Functional Gain - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27296616 chr8:27296617 synonymous SNV . 0 22 hm5C_associated_SNPs_108716 0 0 3 DDX24 POSTAR2 ENCODE chr8:27296602-27296638
64251 chr5 150844708 150844708 1 + C T GBM 150844707 + 150844687 150844727 41 TCCAGCCCCTGCTCCTGGCTCCGGAACCACGCACACTGGGG TCCAGCCCCTGCTCCTGGCTCTGGAACCACGCACACTGGGG < 41bp 0.52182091374152 0.770506572859747 0.2304362 0.19336969 prediction 0.497371318236453 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150844707 chr5:150844708 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108724 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr5:150844679-150844715
64251 chr1 156761543 156761543 1 + C A rs35929266 156761542 + 156761522 156761562 41 GACCCGGCCCTGGTCCCCCCCCAGGAAATTGCCCCAGATGC GACCCGGCCCTGGTCCCCCCCAAGGAAATTGCCCCAGATGC < 41bp 0.527312623605381 0.775987609835905 0.11845347 0.26239812 prediction 0.497349972461049 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156761542 chr1:156761543 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_108725 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:156761519-156761543
64251 chr3 141162020 141162020 1 + C A rs201135573 141162019 + 141161999 141162039 41 GCAGCGAAACCGAAAACATGCCGGAAGCCAAAGACATTCTC GCAGCGAAACCGAAAACATGCAGGAAGCCAAAGACATTCTC < 41bp 0.528848367805323 0.777519979595333 0.344814 0.4414015 prediction 0.49734322358002 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141162019 chr3:141162020 synonymous SNV . 0 22 hm5C_associated_SNPs_108728 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141162010-141162048
64251 chr3 20167584 20167584 1 + T G STAD 20167582 + 20167562 20167602 41 CCCCGAATGCCAAAAGAATACATCACACGGCTCGTCTTTGA CCCCGAATGCCAAAAGAATACAGCACACGGCTCGTCTTTGA < 41bp 0.631312667080643 0.879931213168633 0.025806725 0.080835074 prediction 0.497237092175981 Functional Gain - KAT2B ENSG00000114166 CDS Human protein_coding chr3:20167582 chr3:20167584 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_108733 0 0 1 RBM15 POSTAR2 ENCODE chr3:20167492-20167592
64251 chr10 1042091 1042091 1 + C A BLCA 1042087 + 1042067 1042107 41 ACTGATGAAGTATGGCGACTCTCTCTACCGCTGCAAACAGC ACTGATGAAGTATGGCGACTCTCTATACCGCTGCAAACAGC < 41bp 0.318531083507906 0.748603898594674 0.31351373 0.93165034 prediction 0.497207797189349 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1042087 chr10:1042091 synonymous SNV . 0 25 hm5C_associated_SNPs_108735 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr10:1042047-1042114
64251 chr3 128621442 128621442 1 + T G UCEC 128621440 + 128621420 128621460 41 GGCCGGTTCAGCATGGGCAGCGTCGTGGCTGGGCTGCTCAA GGCCGGTTCAGCATGGGCAGCGGCGTGGCTGGGCTGCTCAA < 41bp 0.390864042433573 0.748601481260432 0.12906516 0.41384906 prediction 0.497202962520864 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128621440 chr3:128621442 nonsynonymous SNV 0.087 1 23 hm5C_associated_SNPs_108736 0 0 5 BUD13 POSTAR2 ENCODE chr3:128621433-128621468
64251 chr16 67262903 67262903 1 + C A UCEC 67262902 + 67262882 67262922 41 CCAGGCCGGGCCCTTTACCTCCTGTGGGTGAATGTGCTGGG CCAGGCCGGGCCCTTTACCTCATGTGGGTGAATGTGCTGGG < 41bp 0.494200475837292 0.748594759478976 0.22887939 0.84650624 prediction 0.497189518957953 Functional Gain - TMEM208 ENSG00000168701 CDS Human protein_coding chr16:67262902 chr16:67262903 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_108739 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:67262858-67262905
64251 chr9 36211736 36211736 1 + C T LUSC 36211735 + 36211715 36211755 41 GTCTCCCGCATGCGCTCAGTCCTCATCTCCCTCAAGCAGGC GTCTCCCGCATGCGCTCAGTCTTCATCTCCCTCAAGCAGGC < 41bp 0.527174773321078 0.775766218790552 0.02785638 0.02515629 prediction 0.497182890938947 Functional Gain - CLTA ENSG00000122705 CDS Human protein_coding chr9:36211735 chr9:36211736 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_108740 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:36211715-36211738
64251 chr2 239237974 239237974 1 + T C rs17854985 239237972 + 239237952 239237992 41 AGAACAGAGAGCATGACAAACCTGAGAAAAAGGTAAAGTCT AGAACAGAGAGCATGACAAACCCGAGAAAAAGGTAAAGTCT < 41bp 0.515009854214579 0.763599729805022 0.1892741 0.24585024 prediction 0.497179751180885 Functional Gain - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239237972 chr2:239237974 synonymous SNV . 0 23 hm5C_associated_SNPs_108741 0 0 2 GRWD1 POSTAR2 ENCODE chr2:239237853-239237978
64251 chrX 129060060 129060060 1 + C T SKCM 129060059 + 129060039 129060079 41 GGCGAGTGGGGTGGTGTGGGCCTAAAGCCCAGTGCCAAGAA GGCGAGTGGGGTGGTGTGGGCTTAAAGCCCAGTGCCAAGAA < 41bp 0.498885780696755 0.748581041290388 0.39487752 0.44316188 prediction 0.497162082580776 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129060059 chrX:129060060 synonymous SNV . 0 22 hm5C_associated_SNPs_108743 0 0 1 ZNF622 POSTAR2 ENCODE chrX:129060045-129060081
64251 chr19 54080826 54080826 1 + T G STAD 54080823 + 54080803 54080843 41 AGGAGTGTGGGAAGGCCTTTCGCTGGGGTTCGAGCCTCGTT AGGAGTGTGGGAAGGCCTTTCGCGGGGGTTCGAGCCTCGTT < 41bp 0.661452820835011 0.910020758413894 0.3425321 0.6914797 prediction 0.497135875157767 Functional Gain - ZNF331 ENSG00000130844 CDS Human protein_coding chr19:54080823 chr19:54080826 nonsynonymous SNV 0.002 1 24 hm5C_associated_SNPs_108746 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:54080802-54080830
64251 chr15 76632832 76632832 1 + C G LUAD 76632828 + 76632808 76632848 41 ATCCGCGTCTGGTTCCAGAACAAGCGCTGCAAGGACAAGAA ATCCGCGTCTGGTTCCAGAACAAGGGCTGCAAGGACAAGAA < 41bp 0.457933366596008 0.748564697031584 0.8737646 0.8958529 prediction 0.497129394063168 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76632828 chr15:76632832 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_108747 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:76632815-76632853
64251 chr22 24123393 24123393 1 + C A LUSC 24123392 + 24123372 24123412 41 CACCCCAGCCAGACGCCCCGCCAGATGCCTGTGAGGCCTCC CACCCCAGCCAGACGCCCCGCAAGATGCCTGTGAGGCCTCC < 41bp 0.521833238935257 0.770380800508333 0.40145323 0.07733813 prediction 0.497095123146153 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24123392 chr22:24123393 nonsynonymous SNV 0.879 4 22 hm5C_associated_SNPs_108751 0 0 1 SND1 POSTAR2 ENCODE chr22:24123379-24123411
64251 chr14 67852731 67852731 1 + C G rs10131175 67852730 + 67852710 67852750 41 GTTCACTGATTTGCCCCAACCCCAAGGTAATGGTCATCTAC GTTCACTGATTTGCCCCAACCGCAAGGTAATGGTCATCTAC < 41bp 0.518069248792894 0.766608323860439 0.087650746 0.07579848 prediction 0.497078150135089 Functional Gain - EIF2S1 ENSG00000134001 UTR3 Human protein_coding chr14:67852730 chr14:67852731 . . 0 22 hm5C_associated_SNPs_108752 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:67852679-67852734
64251 chr19 4443328 4443328 1 + C G rs555368487 4443327 + 4443307 4443347 41 AATTGAAGCGTCAGGACCACCCGCCTGGCCACGTGCGCGGG AATTGAAGCGTCAGGACCACCGGCCTGGCCACGTGCGCGGG < 41bp 0.482445518081862 0.748534850579222 0.1527589 0.2564577 prediction 0.497069701158443 Functional Gain - CHAF1A ENSG00000167670 UTR3 Human protein_coding chr19:4443327 chr19:4443328 . . 0 22 hm5C_associated_SNPs_108753 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:4443204-4443328
64251 chr1 44133570 44133570 1 + C T BRCA 44133569 + 44133549 44133589 41 TTGACCATACTCTGCCCACGCCAGAAGCAGCTGAGTTTCTT TTGACCATACTCTGCCCACGCTAGAAGCAGCTGAGTTTCTT < 41bp 0.489610934272282 0.748533430821151 0.5250663 0.2717747 prediction 0.497066861642302 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44133569 chr1:44133570 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_108754 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:44133528-44133580
64251 chr17 45993627 45993627 1 + C A LUAD 45993623 + 45993603 45993643 41 CCTCCTGCTCCCCCACAGCCCACACCGCGGAAACTTGTCCC CCTCCTGCTCCCCCACAGCCCACAACGCGGAAACTTGTCCC < 41bp 0.321284791540052 0.748514111581969 0.0021386743 0.005436152 prediction 0.497028223163938 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:45993623 chr17:45993627 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_108757 0 0 4 DDX59 POSTAR2 ENCODE chr17:45993592-45993783
64251 chr22 40365465 40365465 1 + C A LUAD 40365461 + 40365441 40365481 41 AAATGATGGGCATTGTGGCACCGGCTTGGGCAGTGAAATGA AAATGATGGGCATTGTGGCACCGGATTGGGCAGTGAAATGA < 41bp 0.342851024090549 0.748497893567697 0.21133873 0.29841405 prediction 0.496995787135395 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40365461 chr22:40365465 synonymous SNV . 0 25 hm5C_associated_SNPs_108758 0 0 1 ZNF622 POSTAR2 ENCODE chr22:40365415-40365474
64251 chr14 105931048 105931048 1 + C G LIHC 105931047 + 105931027 105931067 41 CAGCCCGGAGCAGCGGGAGCCCCAAGTTTGCCATGAAGACC CAGCCCGGAGCAGCGGGAGCCGCAAGTTTGCCATGAAGACC < 41bp 0.431278003564339 0.748496412712039 0.35575005 0.48725182 prediction 0.496992825424078 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105931047 chr14:105931048 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_108760 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:105931040-105931060
64251 chr17 79080642 79080642 1 + C T SKCM 79080641 + 79080621 79080661 41 GGCGCCGCCTCCCGGGCCTTCCCCGCCCAGACGGCCAGCGG GGCGCCGCCTCCCGGGCCTTCTCCGCCCAGACGGCCAGCGG < 41bp 0.513931322022297 0.762417285873804 0.17559919 0.2331818 prediction 0.496971927703016 Functional Gain - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79080641 chr17:79080642 nonsynonymous SNV 0.433 0 22 hm5C_associated_SNPs_108762 0 0 1 RPS3 POSTAR2 ENCODE chr17:79080633-79080669
64251 chr6 160198428 160198428 1 + C T UCEC 160198427 + 160198407 160198447 41 AGCACGGATAGTTTCCTGGTCCCAAGTGGGTGTGGAGCCTT AGCACGGATAGTTTCCTGGTCTCAAGTGGGTGTGGAGCCTT < 41bp 0.548973869192575 0.797456348445885 0.020332605 0.022590637 prediction 0.49696495850662 Functional Gain - ACAT2 ENSG00000120437 CDS Human protein_coding chr6:160198427 chr6:160198428 synonymous SNV . 0 22 hm5C_associated_SNPs_108763 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:160198406-160198444
64251 chr8 123965224 123965224 1 + T G UCEC 123965221 + 123965201 123965241 41 AGAAGTGGTTCAGTGACCACCGATATCGGTGTCAAAGGGGC AGAAGTGGTTCAGTGACCACCGAGATCGGTGTCAAAGGGGC < 41bp 0.364365322354407 0.748450055626691 0.14875594 0.4802835 prediction 0.496900111253382 Functional Gain - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123965221 chr8:123965224 nonsynonymous SNV 0.976 5 24 hm5C_associated_SNPs_108767 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:123965223-123965254
64251 chr18 72168607 72168607 1 + C G rs151185140 72168606 + 72168586 72168626 41 TCCAGAGTGTGTCTGCGTGGCCGGAGAAGAGAGGCGAAATC TCCAGAGTGTGTCTGCGTGGCGGGAGAAGAGAGGCGAAATC < 41bp 0.616211130949682 0.864650312215919 0.7193495 0.83035827 prediction 0.496878362532474 Functional Gain - CNDP2 ENSG00000133313 CDS Human protein_coding chr18:72168606 chr18:72168607 nonsynonymous SNV 0.913 4 22 hm5C_associated_SNPs_108770 0 0 3 DDX3X POSTAR2 ENCODE chr18:72168561-72168636
64251 chr8 128750687 128750687 1 + C T UCEC 128750686 + 128750666 128750706 41 TCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGCCGC TCGAGCTGCTGCCCACCCCGCTCCTGTCCCCTAGCCGCCGC < 41bp 0.53375305999362 0.782185751195174 0.22491986 0.35870302 prediction 0.496865382403108 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128750686 chr8:128750687 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_108773 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:128750650-128750698
64251 chr1 167666552 167666552 1 + C A LUAD 167666551 + 167666531 167666571 41 GCGGGAGAGGGAGTGAGAACCCTGGGACCTGCTGAAAAGCC GCGGGAGAGGGAGTGAGAACCATGGGACCTGCTGAAAAGCC < 41bp 0.487690915927892 0.748405423761964 0.43107402 0.8313966 prediction 0.496810847523929 Functional Gain - RCSD1 ENSG00000198771 CDS Human protein_coding chr1:167666551 chr1:167666552 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_108776 0 0 1 SF3B1 POSTAR2 ENCODE chr1:167666548-167666582
64251 chr11 36057768 36057768 1 + C A OV 36057764 + 36057744 36057784 41 CTGGCAGTGTGACGGGCTGCCTGACTGCTTCGACAAGAGTG CTGGCAGTGTGACGGGCTGCCTGAATGCTTCGACAAGAGTG < 41bp 0.343001256163227 0.748401098027665 0.025529504 0.10139266 prediction 0.496802196055329 Functional Gain - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36057764 chr11:36057768 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_108777 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:36057755-36057793
64251 chr7 128412672 128412672 1 + C A GBM 128412668 + 128412648 128412688 41 GCTGCATGTGTCGGATTCATCTGTCATGGCCTTCCCACACA GCTGCATGTGTCGGATTCATCTGTAATGGCCTTCCCACACA < 41bp 0.645352192456284 0.893749132844637 0.10154769 0.14269134 prediction 0.496793880776706 Functional Gain - OPN1SW ENSG00000128617 CDS Human protein_coding chr7:128412668 chr7:128412672 nonsynonymous SNV 0.929 0 25 hm5C_associated_SNPs_108779 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:128412595-128412683
64251 chr16 56928523 56928523 1 + C T SKCM 56928522 + 56928502 56928542 41 ATCCGTGTGTTCGTAGGCGGCCAGATTAACAGGATGGACCA ATCCGTGTGTTCGTAGGCGGCTAGATTAACAGGATGGACCA < 41bp 0.507939816223377 0.756334412793315 0.8779289 0.49270812 prediction 0.496789193139876 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56928522 chr16:56928523 stopgain 0.966 1 22 hm5C_associated_SNPs_108781 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:56928520-56928540
64251 chr1 36411312 36411312 1 + C T SKCM 36411311 + 36411291 36411331 41 AGGACCCGCTGGGGCCCAGCCCCTACTCATGGTGCCCAGAA AGGACCCGCTGGGGCCCAGCCTCTACTCATGGTGCCCAGAA < 41bp 0.487972171406574 0.748393808232228 0.077739745 0.9282248 prediction 0.496787616464457 Functional Gain - AGO3 ENSG00000126070 CDS Human protein_coding chr1:36411311 chr1:36411312 synonymous SNV . 0 22 hm5C_associated_SNPs_108782 0 0 14 U2AF2 POSTAR2 GSE83923,CSM2221661 chr1:36411300-36411320
64251 chr1 57169955 57169955 1 + C T SKCM 57169954 + 57169934 57169974 41 CCCCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTT CCCCAGGCCTGAAACCTCATCTAGAAAGGATGCCACCTCTT < 41bp 0.512122388348177 0.760515121862659 0.13187948 0.2023058 prediction 0.496785467028963 Functional Gain - PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57169954 chr1:57169955 nonsynonymous SNV 0.948 2 22 hm5C_associated_SNPs_108784 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:57169908-57169957
64251 chr3 44700525 44700525 1 + T C PRAD 44700523 + 44700503 44700543 41 GCTTGGACAAAAGCCTTTTACGTGTAGCGTGTGTGGGAAAG GCTTGGACAAAAGCCTTTTACGCGTAGCGTGTGTGGGAAAG < 41bp 0.527801111711148 0.77617285643372 0.043387443 0.05262071 prediction 0.496743489445145 Functional Gain - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44700523 chr3:44700525 nonsynonymous SNV 0.599 4 23 hm5C_associated_SNPs_108787 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:44700501-44700588
64251 chr13 103492161 103492161 1 + T C UCEC 103492159 + 103492139 103492179 41 GGAAAAAGATGTCTAGTATCCATGAGAGAAGGAACAGTGGT GGAAAAAGATGTCTAGTATCCACGAGAGAAGGAACAGTGGT < 41bp 0.553950182774215 0.802300278091251 0.2420341 0.28122652 prediction 0.496700190634073 Functional Gain - BIVM ENSG00000134897 CDS Human protein_coding chr13:103492159 chr13:103492161 synonymous SNV . 0 23 hm5C_associated_SNPs_108789 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr13:103492146-103492166
64251 chr3 32932357 32932357 1 + C T SKCM 32932356 + 32932336 32932376 41 CATACGTGGTGAGTTACCGACCCCAGCTGGAGGGTGAGCAC CATACGTGGTGAGTTACCGACTCCAGCTGGAGGGTGAGCAC < 41bp 0.555423829528302 0.803748647147588 0.098392606 0.9049612 prediction 0.496649635238573 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932356 chr3:32932357 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_108792 0 0 3 EIF3H POSTAR2 ENCODE chr3:32932246-32932387
64251 chr9 131115449 131115449 1 + C T SKCM 131115448 + 131115428 131115468 41 TTTCCAGCCGCTTCCACATACCCCAGGTGGCTGAGTTCTAC TTTCCAGCCGCTTCCACATACTCCAGGTGGCTGAGTTCTAC < 41bp 0.542287428013212 0.790600717923296 0.097173214 0.9280633 prediction 0.496626579820169 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131115448 chr9:131115449 nonsynonymous SNV 0.990 1 22 hm5C_associated_SNPs_108794 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr9:131115431-131115462
64251 chr4 152571430 152571430 1 + C T LIHC 152571429 + 152571409 152571449 41 CTAACCTGACAGCCGCCCACCCGGAGAGCGAGGAGCTCATT CTAACCTGACAGCCGCCCACCTGGAGAGCGAGGAGCTCATT < 41bp 0.502754467873168 0.751064887639411 0.82639194 0.23264316 prediction 0.496620839532485 Functional Gain - FAM160A1 ENSG00000164142 CDS Human protein_coding chr4:152571429 chr4:152571430 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_108795 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:152571420-152571450
64251 chr17 38451656 38451656 1 + C T rs143357695 38451655 + 38451635 38451675 41 GCTGCAGTTCAATTCTGTGCCCGCAAAGTCTCTGCTGTTTC GCTGCAGTTCAATTCTGTGCCTGCAAAGTCTCTGCTGTTTC < 41bp 0.531372125205413 0.779666257612096 0.024750829 0.3727603 prediction 0.496588264813366 Functional Gain - CDC6 ENSG00000094804 CDS Human protein_coding chr17:38451655 chr17:38451656 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108799 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:38451603-38451667
64251 chr18 77170566 77170566 1 + C G rs1063668 77170565 + 77170545 77170585 41 AGCAGCTTTGGACGGTGGGCCCGCGGGCTACTTCCTCTCCT AGCAGCTTTGGACGGTGGGCCGGCGGGCTACTTCCTCTCCT < 41bp 0.44694888895267 0.748289102298437 0.40154138 0.9201752 prediction 0.496578204596875 Functional Gain - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77170565 chr18:77170566 synonymous SNV . 0 22 hm5C_associated_SNPs_108802 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:77170560-77170580
64251 chr22 38088786 38088786 1 + C G rs73409425 38088785 + 38088765 38088805 41 TCTGCAGGGCTGTCCTCTCTCCACAGCCAACAGCCAGGCCT TCTGCAGGGCTGTCCTCTCTCGACAGCCAACAGCCAGGCCT < 41bp 0.554257354033053 0.802531860718413 0.3216741 0.86371577 prediction 0.49654901337072 Functional Gain - NOL12 ENSG00000100101 UTR3 Human protein_coding chr22:38088785 chr22:38088786 . . 0 22 hm5C_associated_SNPs_108808 0 0 2 BUD13 POSTAR2 ENCODE chr22:38088736-38088798
64251 chr6 34835154 34835154 1 + C T LUAD 34835153 + 34835133 34835173 41 GGAGAAGACCTCATCTTTCACCCGGTCAGCAGCTCTACTTT GGAGAAGACCTCATCTTTCACTCGGTCAGCAGCTCTACTTT < 41bp 0.501221176476418 0.749491507266823 0.28347975 0.18967894 prediction 0.496540661580811 Functional Gain - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34835153 chr6:34835154 nonsynonymous SNV 0.423 0 22 hm5C_associated_SNPs_108809 0 0 1 PRPF8 POSTAR2 ENCODE chr6:34835146-34835195
64251 chr6 34741226 34741226 1 + C A UCEC 34741225 + 34741205 34741245 41 CTTTGTTTTGTCCTGCAGCTCCTGGAATGAGGCCGCCCATG CTTTGTTTTGTCCTGCAGCTCATGGAATGAGGCCGCCCATG < 41bp 0.503006361371069 0.751272587355867 0.32304192 0.5664796 prediction 0.496532451969596 Functional Gain - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34741225 chr6:34741226 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_108810 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:34741222-34741257
64251 chr17 694810 694810 1 + C A rs183214037 694806 + 694786 694826 41 CCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGGGCGCACAT CCTGGGAGCCCAAAGTGCTCCGGGAGGGTATGGGCGCACAT < 41bp 0.671710046552432 0.919974032611277 0.60405123 0.69895995 prediction 0.49652797211769 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:694806 chr17:694810 nonsynonymous SNV 0.689 4 25 hm5C_associated_SNPs_108811 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:694789-694834
64251 chr17 38991040 38991040 1 + T A LGG 38991036 + 38991016 38991056 41 TTCTTTGTGCTTGCGGTCATCGGTTGAGAGAAGGACTTCTT TTCTTTGTGCTTGCGGTCATCGGTAGAGAGAAGGACTTCTT < 41bp 0.59574457541113 0.844001804920907 0.32425082 0.4201641 prediction 0.496514459019553 Functional Gain - TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38991036 chr17:38991040 stopgain 0.015 0 25 hm5C_associated_SNPs_108813 0 0 12 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:38990960-38991040
64251 chr17 40936148 40936148 1 + C G rs142280606 40936144 + 40936124 40936164 41 GACCTGGGCCTGGCCACGCTCAAGCGCGCCTCCTTTGCCAA GACCTGGGCCTGGCCACGCTCAAGGGCGCCTCCTTTGCCAA < 41bp 0.592637150186719 0.84088841230428 0.7285466 0.9491721 prediction 0.49650252423512 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40936144 chr17:40936148 nonsynonymous SNV 0.984 3 25 hm5C_associated_SNPs_108815 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:40936140-40936177
64251 chr2 97463258 97463258 1 + C T LUAD 97463257 + 97463237 97463277 41 CTTCTTCCGGCAGCTGACAACCGAAGCCGGAAGCGGGTGTC CTTCTTCCGGCAGCTGACAACTGAAGCCGGAAGCGGGTGTC < 41bp 0.493294273609198 0.748216942463777 0.78957105 0.4764129 prediction 0.496433884927554 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97463257 chr2:97463258 stopgain 0.996 1 22 hm5C_associated_SNPs_108820 0 0 1 BUD13 POSTAR2 ENCODE chr2:97463242-97463344
64251 chr10 114154734 114154734 1 + C T SKCM 114154733 + 114154713 114154753 41 TATCTTTAACTTTTTGTTTTCCCCACTTCCGACCCCGGCGT TATCTTTAACTTTTTGTTTTCTCCACTTCCGACCCCGGCGT < 41bp 0.552735048262268 0.800933107219299 0.15804854 0.9024193 prediction 0.49639611791406 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114154733 chr10:114154734 synonymous SNV . 0 22 hm5C_associated_SNPs_108826 0 0 3 DDX3X POSTAR2 ENCODE chr10:114154725-114154804
64251 chr11 45948053 45948053 1 + C T rs533759355 45948052 + 45948032 45948072 41 AACAAGCATGTGGAATTCTTCCGCAATTTCTACCTGACCTT AACAAGCATGTGGAATTCTTCTGCAATTTCTACCTGACCTT < 41bp 0.48896889106567 0.748193971943235 0.22053397 0.19404307 prediction 0.496387943886471 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45948052 chr11:45948053 nonsynonymous SNV 0.506 3 22 hm5C_associated_SNPs_108827 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585675 chr11:45948037-45948076
64251 chr11 60689259 60689259 1 + C A COAD 60689258 + 60689238 60689278 41 GCTTCCAGGTGATTACCTCGCCCAGGGCCTGAAGCTCAGCC GCTTCCAGGTGATTACCTCGCACAGGGCCTGAAGCTCAGCC < 41bp 0.527189616882479 0.775328821690575 0.37588528 0.359892 prediction 0.496278409616193 Functional Gain - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689258 chr11:60689259 synonymous SNV . 0 22 hm5C_associated_SNPs_108836 0 0 5 RPS3 POSTAR2 ENCODE chr11:60689245-60689274
64251 chr7 44805846 44805846 1 + C T SKCM 44805845 + 44805825 44805865 41 CCAACCCTTGCTGAGTTCACCCCGGGACCACCCCCCATCTC CCAACCCTTGCTGAGTTCACCTCGGGACCACCCCCCATCTC < 41bp 0.520247616311988 0.768383406223007 0.6065743 0.48039326 prediction 0.496271579822039 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805845 chr7:44805846 nonsynonymous SNV 0.888 1 22 hm5C_associated_SNPs_108838 0 0 5 DDX59 POSTAR2 ENCODE chr7:44805781-44805912
64251 chr1 113231614 113231614 1 + T A SARC 113231610 + 113231590 113231630 41 GCTGTATGGAATGAAGATTGCAAATCTGGCCTACGTCACCA GCTGTATGGAATGAAGATTGCAAAACTGGCCTACGTCACCA < 41bp 0.431068248833433 0.748130505990437 0.13835675 0.24669653 prediction 0.496261011980874 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113231610 chr1:113231614 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_108839 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:113231591-113231622
64251 chr19 19308370 19308370 1 + C T UCEC 19308369 + 19308349 19308389 41 GCCAGACGAGCGCGGCTTCACCCCCCTCATCTGGGCCTCCG GCCAGACGAGCGCGGCTTCACTCCCCTCATCTGGGCCTCCG < 41bp 0.487700079486261 0.748124575743077 0.053771406 0.1685102 prediction 0.496249151486153 Functional Gain - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19308369 chr19:19308370 synonymous SNV . 0 22 hm5C_associated_SNPs_108840 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19308347-19308400
64251 chr10 3189867 3189867 1 - G T SARC 3189871 - 3189851 3189891 41 TGAAGATGACCGCCCAGGAGCTCGCCAATGGAATTCCTGAC TGAAGATGACCGCCCAGGAGCTCGACAATGGAATTCCTGAC < 41bp 0.312881398058357 0.748120343805131 0.37286568 0.18793905 prediction 0.496240687610262 Functional Gain - PITRM1 ENSG00000107959 CDS Human protein_coding chr10:3189871 chr10:3189867 nonsynonymous SNV 0.023 1 25 hm5C_associated_SNPs_108841 0 0 3 FMR1 POSTAR2 ENCODE chr10:3189851-3189910
64251 chr16 845278 845278 1 + C G rs61753374 845274 + 845254 845294 41 CTTCCAGCTGCTGCGCTACCCACCCTTCCTGCCCGTGGCCT CTTCCAGCTGCTGCGCTACCCACCGTTCCTGCCCGTGGCCT < 41bp 0.463908371788944 0.748115146220849 0.017577976 0.27207237 prediction 0.496230292441699 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:845274 chr16:845278 synonymous SNV . 0 25 hm5C_associated_SNPs_108845 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr16:845260-845286
64251 chr7 148481127 148481127 1 + C T SKCM 148481126 + 148481106 148481146 41 CCCAATCATCCAGTAAATCCCCTGAGTTGCTGGCTCGATAC CCCAATCATCCAGTAAATCCCTTGAGTTGCTGGCTCGATAC < 41bp 0.540405959855062 0.788508053589707 0.10372639 0.11133072 prediction 0.49620418746929 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148481126 chr7:148481127 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_108846 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148481105-148481129
64251 chr5 150838438 150838438 1 + C A COAD 150838437 + 150838417 150838457 41 GAGGAGAGCCCGTCGGAAGGCCTCAACAACCTCTCCTCCCC GAGGAGAGCCCGTCGGAAGGCATCAACAACCTCTCCTCCCC < 41bp 0.492961975402495 0.748095121288615 0.5366257 0.13929951 prediction 0.496190242577231 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838437 chr5:150838438 nonsynonymous SNV 0.165 0 22 hm5C_associated_SNPs_108848 0 0 2 ZNF622 POSTAR2 ENCODE chr5:150838377-150838454
64251 chr22 29445263 29445263 1 + C A UCEC 29445262 + 29445242 29445282 41 GGCAGCAGAGGGTGACCCTGCCGGTGCATTACCCCGGCCGC GGCAGCAGAGGGTGACCCTGCAGGTGCATTACCCCGGCCGC < 41bp 0.517151451093824 0.765236786282846 0.9040234 0.91574657 prediction 0.496170670378044 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445262 chr22:29445263 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_108850 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29445255-29445290
64251 chr4 187005868 187005868 1 + T G rs115677523 187005866 + 187005846 187005886 41 ATTCCATTATATTGGTTTTCCTTGAGGAGATTCCAGATTAT ATTCCATTATATTGGTTTTCCTGGAGGAGATTCCAGATTAT < 41bp 0.601866239117007 0.849941859847717 0.08460167 0.22245875 prediction 0.496151241461421 Functional Gain - TLR3 ENSG00000164342 CDS Human protein_coding chr4:187005866 chr4:187005868 synonymous SNV . 0 23 hm5C_associated_SNPs_108852 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:187005860-187005891
64251 chr20 60864362 60864362 1 + C T CESC 60864361 + 60864341 60864381 41 TGCCGCCTGCGCCCTGACATCCGCGGCATGGAGAATGGCAA TGCCGCCTGCGCCCTGACATCTGCGGCATGGAGAATGGCAA < 41bp 0.523570771052928 0.771637011192589 0.60609996 0.3416737 prediction 0.496132480279321 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60864361 chr20:60864362 nonsynonymous SNV 0.967 4 22 hm5C_associated_SNPs_108855 0 0 3 GRWD1 POSTAR2 ENCODE chr20:60864338-60864398
64251 chr15 91488186 91488186 1 + C T rs74839044 91488185 + 91488165 91488205 41 TCCTGGGGAGCTCGCAGTGACCGCAAACAGCCGCATGAGCG TCCTGGGGAGCTCGCAGTGACTGCAAACAGCCGCATGAGCG < 41bp 0.490108376867397 0.74805911357138 0.02963072 0.088144004 prediction 0.496118227142761 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91488185 chr15:91488186 synonymous SNV . 0 22 hm5C_associated_SNPs_108858 0 0 5 DDX24 POSTAR2 ENCODE chr15:91488158-91488188
64251 chr16 70500084 70500084 1 + C T rs140084649 70500083 + 70500063 70500103 41 GCAGGGCTTTCACCTGCCTCCCCGTGGAGAACCCCGAGGCC GCAGGGCTTTCACCTGCCTCCTCGTGGAGAACCCCGAGGCC < 41bp 0.503676964989503 0.751727177556261 0.21031606 0.29132497 prediction 0.496100425133516 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70500083 chr16:70500084 nonsynonymous SNV 0.388 4 22 hm5C_associated_SNPs_108860 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:70500070-70500124
64251 chr14 39650346 39650346 1 + C A STAD 39650345 + 39650325 39650365 41 AGCCTGTGGCTCAACCTCAGCCTCAGTCTCAGCCCCAGCTT AGCCTGTGGCTCAACCTCAGCATCAGTCTCAGCCCCAGCTT < 41bp 0.500858255982022 0.748903295239989 0.018698305 0.028194666 prediction 0.496090078515934 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650345 chr14:39650346 nonsynonymous SNV 0.083 1 22 hm5C_associated_SNPs_108863 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:39650248-39650376
64251 chr10 88719789 88719789 1 + C A rs760113 88719788 + 88719768 88719808 41 GACCAAGGAGCAGGCCAACGCCGTGAGCGAGGCTGTGGTGA GACCAAGGAGCAGGCCAACGCAGTGAGCGAGGCTGTGGTGA < 41bp 0.524489888807152 0.772532862325593 0.28147262 0.86757505 prediction 0.496085947036881 Functional Gain - SNCG ENSG00000173267 CDS Human protein_coding chr10:88719788 chr10:88719789 nonsynonymous SNV 0.966 2 22 hm5C_associated_SNPs_108864 0 0 1 DDX55 POSTAR2 ENCODE chr10:88719757-88719792
64251 chr1 43305712 43305712 1 + C G COAD 43305711 + 43305691 43305731 41 TTTCATTCTTTAGAGAAACTCCGGAGTGAACTGAGTAAGTT TTTCATTCTTTAGAGAAACTCGGGAGTGAACTGAGTAAGTT < 41bp 0.610121144466243 0.858146527428308 0.52187324 0.90499234 prediction 0.49605076592413 Functional Gain - ERMAP ENSG00000164010 CDS Human protein_coding chr1:43305711 chr1:43305712 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_108866 0 0 5 EFTUD2 POSTAR2 ENCODE chr1:43305694-43305751
64251 chr1 110884310 110884310 1 + C A LUSC 110884309 + 110884289 110884329 41 TAGCACCAGCACTGCTTCCTCCAAGCTGAAGTCCCCGTCCC TAGCACCAGCACTGCTTCCTCAAAGCTGAAGTCCCCGTCCC < 41bp 0.505067154836249 0.753091896919975 0.43470722 0.74399585 prediction 0.496049484167454 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884309 chr1:110884310 synonymous SNV . 0 22 hm5C_associated_SNPs_108867 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chr1:110884264-110884313
64251 chr3 40523409 40523409 1 + T G rs9852518 40523406 + 40523386 40523426 41 AGTAACCTTTGAGGATGTGGCTGTGTACTTCACCCAGAATG AGTAACCTTTGAGGATGTGGCTGGGTACTTCACCCAGAATG < 41bp 0.401547883426241 0.748022405504215 0.098225236 0.43094113 prediction 0.496044811008429 Functional Gain - ZNF619 ENSG00000177873 CDS Human protein_coding chr3:40523406 chr3:40523409 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_108869 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:40523388-40523412
64251 chr19 56915732 56915732 1 + C G rs367599155 56915731 + 56915711 56915751 41 CGCCTTTGTGAGCGCGGCCGCCGGCCAGGATCGAGCCCTGG CGCCTTTGTGAGCGCGGCCGCGGGCCAGGATCGAGCCCTGG < 41bp 0.576749448113252 0.824769102103203 0.35039786 0.8515341 prediction 0.496039307979902 Functional Gain - ZNF583 ENSG00000198440 UTR5 Human protein_coding chr19:56915731 chr19:56915732 . . 0 22 hm5C_associated_SNPs_108871 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:56915718-56915743
64251 chr12 68051430 68051430 1 + T C UCEC 68051428 + 68051408 68051448 41 GATCACAAAGTCCACCAGCACGTGGCCCTAAAGATGGTGCG GATCACAAAGTCCACCAGCACGCGGCCCTAAAGATGGTGCG < 41bp 0.520183212585208 0.768180596034363 0.2901859 0.3448407 prediction 0.495994766898309 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051428 chr12:68051430 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_108877 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:68051426-68051477
64251 chr12 58140020 58140020 1 + C G COAD 58140016 + 58139996 58140036 41 TTGTAATCTCTTGCTCATGTCTGGCTATTAACCGAAGCAAA TTGTAATCTCTTGCTCATGTCTGGGTATTAACCGAAGCAAA < 41bp 0.485226604432932 0.747981078445691 0.1301229 0.27100635 prediction 0.495962156891382 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140016 chr12:58140020 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_108881 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:58139981-58140023
64251 chr1 27269230 27269230 1 + C T SKCM 27269229 + 27269209 27269249 41 TAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAG TAGGCAACGGGGCAGACCTGCTCAATTACCGCTGGACCCAG < 41bp 0.485562283857174 0.747969927845205 0.19201863 0.22183096 prediction 0.49593985569041 Functional Gain - NUDC ENSG00000090273 CDS Human protein_coding chr1:27269229 chr1:27269230 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108882 0 0 21 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:27269208-27269255
64251 chr19 3119345 3119345 1 + C T SKCM 3119344 + 3119324 3119364 41 TCGCACCTGGTGGACTACTTCCCCGAGTTCGATGGTGCGCC TCGCACCTGGTGGACTACTTCTCCGAGTTCGATGGTGCGCC < 41bp 0.520419069419646 0.768371972121615 0.25799832 0.8148265 prediction 0.495905805403938 Functional Gain - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3119344 chr19:3119345 nonsynonymous SNV 0.947 3 22 hm5C_associated_SNPs_108884 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:3119293-3119348
64251 chr8 124442245 124442245 1 + C G BRCA 124442241 + 124442221 124442261 41 AGATACCTATCTGGAAACAACAGGCGAGACCTGGAGATGGA AGATACCTATCTGGAAACAACAGGGGAGACCTGGAGATGGA < 41bp 0.556279028136328 0.804229559195532 0.36300153 0.8749603 prediction 0.495901062118408 Functional Gain - WDYHV1 ENSG00000156795 CDS Human protein_coding chr8:124442241 chr8:124442245 nonsynonymous SNV 0.973 1 25 hm5C_associated_SNPs_108885 0 0 4 BUD13 POSTAR2 ENCODE chr8:124442221-124442271
64251 chr1 10132157 10132157 1 + C A HNSC 10132153 + 10132133 10132173 41 GCCAACCACCCCACTCACCTCTCCCCAGAGGGAGAACCCTC GCCAACCACCCCACTCACCTCTCCACAGAGGGAGAACCCTC < 41bp 0.306261964245557 0.747943673229392 0.5054925 0.95149004 prediction 0.495887346458784 Functional Gain - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10132153 chr1:10132157 synonymous SNV . 0 25 hm5C_associated_SNPs_108886 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:10132120-10132159
64251 chr16 71885986 71885986 1 + C G rs113374986 71885985 + 71885965 71886005 41 CACACAGGAGAAGAAACATTCCAAAATCAGGGCCTCCCTGT CACACAGGAGAAGAAACATTCGAAAATCAGGGCCTCCCTGT < 41bp 0.443100526543617 0.747934624173326 0.10665047 0.2328474 prediction 0.495869248346652 Functional Gain - ATXN1L ENSG00000224470 UTR3 Human protein_coding chr16:71885985 chr16:71885986 . . 0 22 hm5C_associated_SNPs_108890 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:71885977-71886004
64251 chr17 17394915 17394915 1 + T A rs1108740 17394911 + 17394891 17394931 41 GGTTCCTGTGGACCCCAGCTCAGCTCGTCAAGCTGCAGGGG GGTTCCTGTGGACCCCAGCTCAGCACGTCAAGCTGCAGGGG < 41bp 0.591994250319265 0.839916531559785 0.45286506 0.72444814 prediction 0.495844562481039 Functional Gain - MED9 ENSG00000141026 UTR3 Human protein_coding chr17:17394911 chr17:17394915 . . 0 25 hm5C_associated_SNPs_108891 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:17394901-17394922
64251 chr19 47856643 47856643 1 + A G LUAD 47856640 + 47856620 47856660 41 TGGCCCTGCCACGCGGGGCTCTCAGGGACTGGGCAGGCACT TGGCCCTGCCACGCGGGGCTCTCGGGGACTGGGCAGGCACT < 41bp 0.516996621114127 0.764915995022891 0.20318708 0.74891686 prediction 0.495838747817529 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856640 chr19:47856643 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_108892 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:47856640-47856660
64251 chr9 133346897 133346897 1 + C T HNSC 133346896 + 133346876 133346916 41 GAGGCTGGAATCCTGGAGAACCCCAAGGTAATCCCCCAAAC GAGGCTGGAATCCTGGAGAACTCCAAGGTAATCCCCCAAAC < 41bp 0.545751807063836 0.793666437298398 0.28863478 0.9547603 prediction 0.495829260469125 Functional Gain - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133346896 chr9:133346897 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_108894 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr9:133346894-133346915
64251 chr19 17597707 17597707 1 + C G CESC 17597703 + 17597683 17597723 41 TGAACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACC TGAACCTGCGGCGCGAGCCCCTGGGCTTCTGCCTGGGCACC < 41bp 0.45396961963776 0.74789533848503 0.63957536 0.88809896 prediction 0.49579067697006 Functional Gain - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17597703 chr19:17597707 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_108896 0 0 1 SND1 POSTAR2 ENCODE chr19:17597619-17597747
64251 chr12 11326096 11326096 1 + T A rs185461712 11326092 + 11326072 11326112 41 TCTGTTTTATATACCCAAGACAGGTTTCCTAGACTGCGATA TCTGTTTTATATACCCAAGACAGGATTCCTAGACTGCGATA < 41bp 0.541391865264521 0.789283062465879 0.19012657 0.40026456 prediction 0.495782394402715 Functional Gain - SMIM10L1 ENSG00000256537;ENSG00000256629 intergenic Human other chr12:11326092 chr12:11326096 . . 0 25 hm5C_associated_SNPs_108897 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:11326094-11326119
64251 chr1 234458814 234458814 1 + T G UCEC 234458812 + 234458792 234458832 41 GTCCGGGTCATCGCCATCATCATCATCGGCCTGGGTTTTCT GTCCGGGTCATCGCCATCATCAGCATCGGCCTGGGTTTTCT < 41bp 0.621557710258473 0.86944707623566 0.04656118 0.3595189 prediction 0.495778731954374 Functional Gain - SLC35F3 ENSG00000183780 CDS Human protein_coding chr1:234458812 chr1:234458814 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_108898 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr1:234458800-234458820
64251 chr12 665927 665927 1 + A G CHOL 665924 + 665904 665944 41 AAGGCCTGGTCTGGGACCCACACAACCGTAGGAGACAGGTC AAGGCCTGGTCTGGGACCCACACGACCGTAGGAGACAGGTC < 41bp 0.504953222091841 0.752839316151501 0.10950163 0.13335636 prediction 0.495772188119319 Functional Gain - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:665924 chr12:665927 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_108899 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:665902-665930
64251 chr12 119588916 119588916 1 + C T HNSC 119588915 + 119588895 119588935 41 TCACCCATGAAAGGGTGTTCCCGCAGCTCCTCCTATGCCAG TCACCCATGAAAGGGTGTTCCTGCAGCTCCTCCTATGCCAG < 41bp 0.503835572490542 0.751713173672882 0.728073 0.8630494 prediction 0.495755202364679 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119588915 chr12:119588916 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_108900 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119588900-119589000
64251 chr11 64003328 64003328 1 + C T rs61761266 64003327 + 64003307 64003347 41 TACTCGCGCTACCTGCCAGCCCCGGGAGGTGGTGGTGCCCT TACTCGCGCTACCTGCCAGCCTCGGGAGGTGGTGGTGCCCT < 41bp 0.521329695665459 0.769198130597312 0.08414549 0.12862888 prediction 0.495736869863706 Functional Gain - VEGFB ENSG00000173511 CDS Human protein_coding chr11:64003327 chr11:64003328 synonymous SNV . 0 22 hm5C_associated_SNPs_108901 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:64003291-64003361
64251 chr16 72046103 72046103 1 + T G rs189332001 72046100 + 72046080 72046120 41 GGAGTCAGCCCACAGACTGGCTGTTCGCTTCACCTCCCTGG GGAGTCAGCCCACAGACTGGCTGGTCGCTTCACCTCCCTGG < 41bp 0.346085155170795 0.747858910645523 0.0584476 0.20246726 prediction 0.495717821291046 Functional Gain - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046100 chr16:72046103 nonsynonymous SNV 0.148 3 24 hm5C_associated_SNPs_108903 0 0 2 PPIG POSTAR2 ENCODE chr16:72046042-72046150
64251 chr8 22472950 22472950 1 + C A rs7001453 22472949 + 22472929 22472969 41 CATGTGCAGGTGGCGCTTTGCCGAGTTTCAGTACCTGCAGC CATGTGCAGGTGGCGCTTTGCAGAGTTTCAGTACCTGCAGC < 41bp 0.546423118723848 0.794260704479639 0.8098755 0.9158538 prediction 0.495675171511581 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22472949 chr8:22472950 synonymous SNV . 0 22 hm5C_associated_SNPs_108908 0 0 2 RPS3 POSTAR2 ENCODE chr8:22472936-22472986
64251 chr19 7527157 7527157 1 + C T rs139068196 7527156 + 7527136 7527176 41 CCCCAGCCCCGAGGCCTATTCCGTGGAGGGGACCCATCCGA CCCCAGCCCCGAGGCCTATTCTGTGGAGGGGACCCATCCGA < 41bp 0.496528103314173 0.747820731263866 0.79169035 0.14241439 prediction 0.495641462527731 Functional Gain - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7527156 chr19:7527157 nonsynonymous SNV 0.111 0 22 hm5C_associated_SNPs_108911 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7527135-7527175
64251 chr1 65690488 65690488 1 + C T UCEC 65690487 + 65690467 65690507 41 CCAGCAGGAGGATGATAAACCCGAAGCAGTTGCTGCCAGGC CCAGCAGGAGGATGATAAACCTGAAGCAGTTGCTGCCAGGC < 41bp 0.514797863926267 0.762613379101683 0.2203809 0.27172464 prediction 0.495631030350832 Functional Gain - AK4 ENSG00000162433 CDS Human protein_coding chr1:65690487 chr1:65690488 synonymous SNV . 0 22 hm5C_associated_SNPs_108912 0 0 1 LIN28B POSTAR2 ENCODE chr1:65690434-65690488
64251 chr7 143088064 143088064 1 + C G rs111335084 143088063 + 143088043 143088083 41 TGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCCGGCCCCC TGCTGCTTTCACTGCTGCACCGGCGCCCTCGGCCGGCCCCC < 41bp 0.566391633889042 0.814193328116155 0.110967845 0.40841827 prediction 0.495603388454225 Functional Gain - ZYX ENSG00000159840 UTR3 Human protein_coding chr7:143088063 chr7:143088064 . . 0 22 hm5C_associated_SNPs_108915 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:143087932-143088131
64251 chr3 14712604 14712604 1 + C A rs60239620 14712600 + 14712580 14712620 41 GCCACGGACCTAGCCCTGAACATACGTCACCCACTCCTGCC GCCACGGACCTAGCCCTGAACATAAGTCACCCACTCCTGCC < 41bp 0.374111136696261 0.747782172336424 0.025330484 0.046315998 prediction 0.495564344672847 Functional Gain - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14712600 chr3:14712604 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_108918 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:14712578-14712638
64251 chr5 149901150 149901150 1 + C G SKCM 149901149 + 149901129 149901169 41 GAGTCCAGCCGCTTCAAATACCGCACAGAGATTGCGCCGGG GAGTCCAGCCGCTTCAAATACGGCACAGAGATTGCGCCGGG < 41bp 0.609475977456896 0.857255222732743 0.2783624 0.69620913 prediction 0.495558490551693 Functional Gain - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149901149 chr5:149901150 nonsynonymous SNV 0.986 2 22 hm5C_associated_SNPs_108919 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:149901146-149901165
64251 chr1 32797309 32797309 1 + C T STAD 32797308 + 32797288 32797328 41 TTGAGAACCTTAGAATGCTGCCGCACGCACCTGGGGTCCAA TTGAGAACCTTAGAATGCTGCTGCACGCACCTGGGGTCCAA < 41bp 0.5302968910359 0.778074082357934 0.33350503 0.36435777 prediction 0.495554382644069 Functional Gain - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32797308 chr1:32797309 nonsynonymous SNV 0.752 4 22 hm5C_associated_SNPs_108920 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:32797300-32797329
64251 chr2 27851980 27851980 1 + C G rs140581189 27851979 + 27851959 27851999 41 GCTTCTGGGGGTCCGCGGCACCCAGTGTGTCTGTTGGTGTT GCTTCTGGGGGTCCGCGGCACGCAGTGTGTCTGTTGGTGTT < 41bp 0.444945216276899 0.747764771247829 0.10991722 0.20416158 prediction 0.495529542495659 Functional Gain - GPN1 ENSG00000198522 CDS Human protein_coding chr2:27851979 chr2:27851980 nonsynonymous SNV 0.454 2 22 hm5C_associated_SNPs_108924 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:27851962-27851983
64251 chr19 11558289 11558289 1 + T C STAD 11558287 + 11558267 11558307 41 ACCTTCCAGCACCTTCTGCCCCTGACTTGACGGAGCCCAAG ACCTTCCAGCACCTTCTGCCCCCGACTTGACGGAGCCCAAG < 41bp 0.501298864994339 0.749062019281153 0.04365301 0.025637805 prediction 0.495526308573629 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11558287 chr19:11558289 synonymous SNV . 0 23 hm5C_associated_SNPs_108926 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:11558280-11558300
64251 chr2 96686970 96686970 1 + C A UCEC 96686969 + 96686949 96686989 41 CAAGACAGAGGACCTGATAGCCTGGGTGTCCCAGTGAGTGA CAAGACAGAGGACCTGATAGCATGGGTGTCCCAGTGAGTGA < 41bp 0.515988752040355 0.763743751388604 0.8026848 0.89946336 prediction 0.495509998696499 Functional Gain - FAHD2CP ENSG00000231584 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:96686969 chr2:96686970 . . 0 22 hm5C_associated_SNPs_108928 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:96686969-96686983
64251 chr2 24964930 24964930 1 + C T UCEC 24964929 + 24964909 24964949 41 TTTCACAACTAGCAGCAAATCCTGAAGCATCCTTGGCCAAC TTTCACAACTAGCAGCAAATCTTGAAGCATCCTTGGCCAAC < 41bp 0.52413612162695 0.771890381404416 0.28062207 0.23407736 prediction 0.495508519554933 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964929 chr2:24964930 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_108929 0 0 1 UCHL5 POSTAR2 ENCODE chr2:24964925-24964980
64251 chr5 154173242 154173242 1 + C T HNSC 154173241 + 154173221 154173261 41 CTTCACGCCCCACTCGCCCACCGGAGCCTAGACACATACCT CTTCACGCCCCACTCGCCCACTGGAGCCTAGACACATACCT < 41bp 0.497359778998969 0.747747571673862 0.6849595 0.43403494 prediction 0.495495143347723 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154173241 chr5:154173242 nonsynonymous SNV 0.012 0 22 hm5C_associated_SNPs_108932 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154173213-154173276
64251 chr6 41900375 41900375 1 + C G rs149587548 41900371 + 41900351 41900391 41 GCAGCCCCATCCACAGCTATCGCCCGAAATCAGGCGTGAGC GCAGCCCCATCCACAGCTATCGCCGGAAATCAGGCGTGAGC < 41bp 0.537878049002367 0.785612119930564 0.3259832 0.8671023 prediction 0.495468141856394 Functional Gain - BYSL ENSG00000112578 CDS Human protein_coding chr6:41900371 chr6:41900375 synonymous SNV . 0 25 hm5C_associated_SNPs_108936 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:41900360-41900380
64251 chr7 102045110 102045110 1 + C A rs118139519 102045109 + 102045089 102045129 41 AATTGCTGCAGAGGAGCAGACCGCAAAGCGCCGGAAGAAGC AATTGCTGCAGAGGAGCAGACAGCAAAGCGCCGGAAGAAGC < 41bp 0.48427538414342 0.747732221708004 0.12695721 0.15110046 prediction 0.495464443416008 Functional Gain - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102045109 chr7:102045110 synonymous SNV . 0 22 hm5C_associated_SNPs_108938 0 0 5 EIF4G2 POSTAR2 ENCODE chr7:102045091-102045135
64251 chr3 4714999 4714999 1 + C T SKCM 4714998 + 4714978 4715018 41 ACATGCATGTGGACCGAGATCCCCAGGAACAAGTCACCCCC ACATGCATGTGGACCGAGATCTCCAGGAACAAGTCACCCCC < 41bp 0.505473661657327 0.753203986060146 0.06063187 0.8868103 prediction 0.495460648805639 Functional Gain - ITPR1 ENSG00000150995 CDS Human protein_coding chr3:4714998 chr3:4714999 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_108939 0 0 1 FXR2 POSTAR2 ENCODE chr3:4714962-4715075
64251 chr2 223423491 223423491 1 + C G rs61742017 223423490 + 223423470 223423510 41 CTCATGGTTCAAGGTGGTCACCAGGAACAAGGAGGCCAGGC CTCATGGTTCAAGGTGGTCACGAGGAACAAGGAGGCCAGGC < 41bp 0.610599043845455 0.858306669698423 0.6399454 0.88320565 prediction 0.495415251705937 Functional Gain - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423490 chr2:223423491 synonymous SNV . 0 22 hm5C_associated_SNPs_108944 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:223423491-223423533
64251 chr22 24124471 24124471 1 + C A rs28382569 24124470 + 24124450 24124490 41 CCTGGGCCCCGCACCCCTCACCGAGCTGGGCCTGGTGAGGT CCTGGGCCCCGCACCCCTCACAGAGCTGGGCCTGGTGAGGT < 41bp 0.483601854965166 0.747685582348657 0.6498835 0.90269345 prediction 0.495371164697314 Functional Gain - MMP11 ENSG00000099953;ENSG00000267954 CDS Human other chr22:24124470 chr22:24124471 nonsynonymous SNV 0.467 0 22 hm5C_associated_SNPs_108946 0 0 2 RPS3 POSTAR2 ENCODE chr22:24124451-24124532
64251 chr6 26205164 26205164 1 + C G CESC 26205160 + 26205140 26205180 41 GCGCTGAAGAGACAGGGACGCACTCTTTACGGCTTCGGCGG GCGCTGAAGAGACAGGGACGCACTGTTTACGGCTTCGGCGG < 41bp 0.486433190555606 0.747681639531078 0.15842384 0.1265041 prediction 0.495363279062157 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26205160 chr6:26205164 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_108947 0 0 55 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26204840-26205240
64251 chr9 135906443 135906443 1 + C G rs144659860 135906442 + 135906422 135906462 41 GGGGCTGGGGGCCGCCGTCCCCGTGGAGCTGAGGCGGGAGC GGGGCTGGGGGCCGCCGTCCCGGTGGAGCTGAGGCGGGAGC < 41bp 0.599136893786639 0.846786939295618 0.3470046 0.6573076 prediction 0.495300091017957 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906442 chr9:135906443 synonymous SNV . 0 22 hm5C_associated_SNPs_108952 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr9:135906408-135906463
64251 chr15 35529608 35529608 1 + C A rs535123218 35529604 + 35529584 35529624 41 AAAGAACTTGTCCTGGACAACAGTCGGTCGAATGAAGGCAA AAAGAACTTGTCCTGGACAACAGTAGGTCGAATGAAGGCAA < 41bp 0.380670622173761 0.747643192113682 0.35214242 0.34954357 prediction 0.495286384227364 Functional Gain - ANP32AP1 ENSG00000259516 ncRNA_exonic Human transcribed_processed_pseudogene chr15:35529604 chr15:35529608 . . 0 25 hm5C_associated_SNPs_108953 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:35529552-35529612
64251 chr7 98957173 98957173 1 + T C COAD 98957171 + 98957151 98957191 41 ACTGAGTCTTGTTTCAGGGCCATGACTGCTGCCCAATGCTC ACTGAGTCTTGTTTCAGGGCCACGACTGCTGCCCAATGCTC < 41bp 0.477749324214746 0.747638536708126 0.042124182 0.013213247 prediction 0.495277073416251 Functional Gain - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98957171 chr7:98957173 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_108955 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chr7:98957168-98957187
64251 chr14 75470350 75470350 1 + C T UCEC 75470349 + 75470329 75470369 41 GGATTTCAGCTTCCATTATGCCCAACTCCAGTCCAACATCA GGATTTCAGCTTCCATTATGCTCAACTCCAGTCCAACATCA < 41bp 0.530182483435173 0.777815772871757 0.02052319 0.048415303 prediction 0.495266578873166 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75470349 chr14:75470350 synonymous SNV . 0 22 hm5C_associated_SNPs_108956 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:75470313-75470351
64251 chr11 118886068 118886068 1 + T G UCEC 118886066 + 118886046 118886086 41 CCAGACCGAGTTGGGGCCAACTTTGATCACAGCTCCAGGAC CCAGACCGAGTTGGGGCCAACTGTGATCACAGCTCCAGGAC < 41bp 0.399978491280356 0.747633140360578 0.027333468 0.07934615 prediction 0.495266280721157 Functional Gain - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118886066 chr11:118886068 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_108957 0 0 4 GRWD1 POSTAR2 ENCODE chr11:118886016-118886152
64251 chr16 30680519 30680519 1 + C A rs61738791 30680515 + 30680495 30680535 41 GGAAGAGCGGAAGGAGGAGGCTGCCGCCGCCGCTGCCGCTG GGAAGAGCGGAAGGAGGAGGCTGCAGCCGCCGCTGCCGCTG < 41bp 0.670331528634981 0.917952140014442 0.839808 0.8762397 prediction 0.49524122275892 Functional Gain - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680515 chr16:30680519 synonymous SNV . 0 25 hm5C_associated_SNPs_108962 0 0 3 DDX55 POSTAR2 ENCODE chr16:30680493-30680528
64251 chr2 44436411 44436411 1 + T A OV 44436407 + 44436387 44436427 41 TTCAAATGCTCCCAAGGTCTCAGATGAAGCGGTGAAAAAAG TTCAAATGCTCCCAAGGTCTCAGAAGAAGCGGTGAAAAAAG < 41bp 0.432219447117716 0.747612988678744 0.8986894 0.90756404 prediction 0.495225977357489 Functional Gain - PPM1B ENSG00000138032 CDS Human protein_coding chr2:44436407 chr2:44436411 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_108966 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:44436392-44436420
64251 chr14 24884855 24884855 1 + T A UCEC 24884851 + 24884831 24884871 41 TCGCTTCTTCCAGGTTCTGCCGCCTTTCTCTGACCTGTCCA TCGCTTCTTCCAGGTTCTGCCGCCATTCTCTGACCTGTCCA < 41bp 0.41650998507045 0.747564824491086 0.4166401 0.93977785 prediction 0.495129648982172 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24884851 chr14:24884855 synonymous SNV . 0 25 hm5C_associated_SNPs_108974 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1486178 chr14:24884854-24884855
64251 chr17 26725280 26725280 1 - G T rs141940033 26725281 - 26725261 26725301 41 GGACAACAGTGGAGGGTATACCAAATAGAAATAAAACGCAG GGACAACAGTGGAGGGTATACAAAATAGAAATAAAACGCAG < 41bp 0.503503963497102 0.751062398336641 0.6143588 0.37916112 prediction 0.495116869679078 Functional Gain - SARM1;SLC46A1 ENSG00000004139;ENSG00000076351 UTR3 Human other chr17:26725281 chr17:26725280 . . 0 22 hm5C_associated_SNPs_108976 1 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:26725274-26725339
64251 chr4 177250491 177250491 1 + T C rs17629999 177250489 + 177250469 177250509 41 CCCAGAAGTTTATTGAATTGCTTCATTGTTACCTAGCCAGC CCCAGAAGTTTATTGAATTGCTCCATTGTTACCTAGCCAGC < 41bp 0.531894037217856 0.779451888938278 0.08831382 0.8815056 prediction 0.495115703440845 Functional Gain - SPCS3 ENSG00000129128 UTR3 Human protein_coding chr4:177250489 chr4:177250491 . . 0 23 hm5C_associated_SNPs_108977 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:177250321-177250520
64251 chr19 1272061 1272061 1 + C A rs200903901 1272057 + 1272037 1272077 41 TTATGACAGTTACGGTAAGTCACACTCCGAGGGCGCCACGC TTATGACAGTTACGGTAAGTCACAATCCGAGGGCGCCACGC < 41bp 0.678981083073784 0.926534463492639 0.031499863 0.01848051 prediction 0.495106760837711 Functional Gain - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1272057 chr19:1272061 nonsynonymous SNV 0.007 1 25 hm5C_associated_SNPs_108979 0 0 20 WDR33 POSTAR2 GSE61123,GSM1496985 chr19:1272030-1272061
64251 chr12 100904684 100904684 1 + C A UCEC 100904680 + 100904660 100904700 41 TCCTCGTCATCCTATTATTCCAACCTGGGTTTCTACCCCCA TCCTCGTCATCCTATTATTCCAACATGGGTTTCTACCCCCA < 41bp 0.323538625458264 0.747546765866308 0.14764032 0.13943514 prediction 0.495093531732617 Functional Gain - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100904680 chr12:100904684 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_108981 0 0 7 GRWD1 POSTAR2 ENCODE chr12:100904671-100904734
64251 chr6 4032582 4032582 1 + C T rs543978054 4032581 + 4032561 4032601 41 ATCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTA ATCAAAAGATAGGAAAAAATCTCCAATTATAAATGAAAGTA < 41bp 0.50676140037822 0.75430645108633 0.10929075 0.9478034 prediction 0.495090101416219 Functional Gain - PRPF4B ENSG00000112739 CDS Human protein_coding chr6:4032581 chr6:4032582 synonymous SNV . 0 22 hm5C_associated_SNPs_108982 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003587 chr6:4032540-4032600
64251 chr18 9513078 9513078 1 + C A UCEC 9513077 + 9513057 9513097 41 TCCTGCCCCCCACCAGCAGCCCCAGTGAACACCGCAGGGTG TCCTGCCCCCCACCAGCAGCCACAGTGAACACCGCAGGGTG < 41bp 0.484067304656558 0.747538594631549 0.68321073 0.54097664 prediction 0.495077189263099 Functional Gain - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9513077 chr18:9513078 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_108984 0 0 5 DDX3X POSTAR2 ENCODE chr18:9512988-9513091
64251 chrX 152014936 152014936 1 + C A STAD 152014935 + 152014915 152014955 41 CTCATTTGACAGAGGACACTCCCAAAGTGAATGCTGACATA CTCATTTGACAGAGGACACTCACAAAGTGAATGCTGACATA < 41bp 0.501933959975724 0.749470697054917 0.048916698 0.03422597 prediction 0.495073474158386 Functional Gain - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152014935 chrX:152014936 nonsynonymous SNV 0.005 2 22 hm5C_associated_SNPs_108985 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chrX:152014918-152014941
64251 chr19 58132766 58132766 1 + C A GBM 58132762 + 58132742 58132782 41 CAGAAAGTTCACACTGCAGGCAGGCTTTAGGAGTGCTTTGA CAGAAAGTTCACACTGCAGGCAGGATTTAGGAGTGCTTTGA < 41bp 0.465480715284997 0.747529415908321 0.3845492 0.76187456 prediction 0.495058831816643 Functional Gain - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58132762 chr19:58132766 nonsynonymous SNV 0.182 1 25 hm5C_associated_SNPs_108986 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:58132744-58132781
64251 chr19 17973025 17973025 1 + C T SKCM 17973024 + 17973004 17973044 41 GACCACCGCAGGCGCTGTCACCCAGTGCTGTAAGCTGCCTG GACCACCGCAGGCGCTGTCACTCAGTGCTGTAAGCTGCCTG < 41bp 0.498318010320381 0.747516585764645 0.26513886 0.25483838 prediction 0.495033171529289 Functional Gain - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17973024 chr19:17973025 synonymous SNV . 0 22 hm5C_associated_SNPs_108990 0 0 5 METAP2 POSTAR2 ENCODE chr19:17972995-17973028
64251 chr21 47337538 47337538 1 + C T SKCM 47337537 + 47337517 47337557 41 GGACAGTATGCCATCCCTCACCCGGATGTGAGTCTTCACTT GGACAGTATGCCATCCCTCACTCGGATGTGAGTCTTCACTT < 41bp 0.505528793640534 0.753038653328458 0.12315178 0.07260239 prediction 0.495019719375847 Functional Gain - PCBP3 ENSG00000183570 CDS Human protein_coding chr21:47337537 chr21:47337538 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_108991 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr21:47337518-47337546
64251 chrX 136649569 136649569 1 + T G LUSC 136649567 + 136649547 136649587 41 CACCACGGGCCCGGCGCCTTCTTCCGTTATATGCGGCAGCC CACCACGGGCCCGGCGCCTTCTGCCGTTATATGCGGCAGCC < 41bp 0.400617151430602 0.747503443268596 0.08012265 0.20650658 prediction 0.495006886537191 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649567 chrX:136649569 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_108996 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chrX:136649560-136649580
64251 chr22 29695762 29695762 1 + C T SKCM 29695761 + 29695741 29695781 41 GGTGGAGGAAGACGAGGTGGCCCTGGGGGGCCCCCTGGACC GGTGGAGGAAGACGAGGTGGCTCTGGGGGGCCCCCTGGACC < 41bp 0.506257568229506 0.753756537167398 0.3887503 0.62494415 prediction 0.494997937875783 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695761 chr22:29695762 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_109000 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:29695726-29695785
64251 chr17 7474813 7474813 1 + C A rs186229805 7474812 + 7474792 7474832 41 CACTGTGTGAGCCTCGTACCCCAGACCCCAAGCCCATAAAT CACTGTGTGAGCCTCGTACCCAAGACCCCAAGCCCATAAAT < 41bp 0.527828685655986 0.775327016780863 0.26528993 0.79250234 prediction 0.494996662249754 Functional Gain - SENP3-EIF4A1 ENSG00000265500 ncRNA_intronic Human other chr17:7474812 chr17:7474813 . . 0 22 hm5C_associated_SNPs_109001 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:7474708-7474826
64251 chr17 42636483 42636483 1 + T C COAD 42636481 + 42636461 42636501 41 TACACAGTGCCCGCCACCATCGTCATCGCTTGCTACTTCTA TACACAGTGCCCGCCACCATCGCCATCGCTTGCTACTTCTA < 41bp 0.534196195730625 0.781686567052602 0.27139437 0.8233568 prediction 0.494980742643955 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636481 chr17:42636483 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_109004 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42636427-42636524
64251 chr16 89160283 89160283 1 + C G rs562092702 89160279 + 89160259 89160299 41 TGTTGGGCGCCGGAACTGGTCCGGCCCGACTCACGACCCCG TGTTGGGCGCCGGAACTGGTCCGGGCCGACTCACGACCCCG < 41bp 0.57549488056456 0.822972156514844 0.7167265 0.90175277 prediction 0.494954551900568 Functional Gain - ACSF3 ENSG00000176715 UTR5 Human protein_coding chr16:89160279 chr16:89160283 . . 0 25 hm5C_associated_SNPs_109006 0 0 1 DDX3X POSTAR2 ENCODE chr16:89160275-89160347
64251 chr1 48705022 48705022 1 + T C STAD 48705020 + 48705000 48705040 41 TTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCG TTCTGGGGCCTCGTGTTTGGCCCGGGAGTGGGGCTTCTGCG < 41bp 0.533630266331185 0.781104983015042 0.3875249 0.42260092 prediction 0.494949433367715 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48705020 chr1:48705022 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_109008 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:48705017-48705040
64251 chr16 28967323 28967323 1 + C T SKCM 28967322 + 28967302 28967342 41 TCTGGACAACTCTCCTCTGTCCCCACCTTCACCAAGGACCA TCTGGACAACTCTCCTCTGTCTCCACCTTCACCAAGGACCA < 41bp 0.471813550030781 0.747471531912178 0.024551272 0.4740362 prediction 0.494943063824356 Functional Gain - NFATC2IP ENSG00000176953 CDS Human protein_coding chr16:28967322 chr16:28967323 synonymous SNV . 0 22 hm5C_associated_SNPs_109009 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:28967306-28967336
64251 chr20 2846928 2846928 1 + C T SKCM 2846927 + 2846907 2846947 41 AGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCT AGTATGCTTCCCGCGTGGGTCTCGAGCAGAAGGTCAAGGCT < 41bp 0.544015954450439 0.791477990592414 0.31853288 0.45396376 prediction 0.494924072283951 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2846927 chr20:2846928 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_109011 0 0 6 BUD13 POSTAR2 ENCODE chr20:2846848-2846948
64251 chr19 30102813 30102813 1 + T G UCEC 30102811 + 30102791 30102831 41 CATGAACTCTGGAAACAGTACATCAGGGACCTGTGCAGTGG CATGAACTCTGGAAACAGTACAGCAGGGACCTGTGCAGTGG < 41bp 0.634092955362605 0.881542231117115 0.04838538 0.09174627 prediction 0.494898551509019 Functional Gain - POP4 ENSG00000105171 CDS Human protein_coding chr19:30102811 chr19:30102813 nonsynonymous SNV 0.862 1 23 hm5C_associated_SNPs_109015 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:30102800-30102820
64251 chr21 45733850 45733850 1 + C A UCEC 45733849 + 45733829 45733869 41 GGCCGACTGGCTGTTCATCCCCGAGGCTCCACCCGAGGACG GGCCGACTGGCTGTTCATCCCAGAGGCTCCACCCGAGGACG < 41bp 0.510678294435272 0.758117869387709 0.5443389 0.89384043 prediction 0.494879149904873 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45733849 chr21:45733850 synonymous SNV . 0 22 hm5C_associated_SNPs_109018 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr21:45733845-45733858
64251 chr7 27228019 27228019 1 + C G rs73290351 27228018 + 27227998 27228038 41 TCCCCAAGGCTGCGCAATATCCCAGCTTTGCCCGCTCCTGC TCCCCAAGGCTGCGCAATATCGCAGCTTTGCCCGCTCCTGC < 41bp 0.448919629687556 0.747424387916847 0.8239248 0.9227183 prediction 0.494848775833693 Functional Gain - HOXA11-AS ENSG00000240990;ENSG00000253508 ncRNA_intronic Human other chr7:27228018 chr7:27228019 . . 0 22 hm5C_associated_SNPs_109022 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:27228000-27228020
64251 chr19 14578389 14578389 1 + C T SKCM 14578388 + 14578368 14578408 41 CCGCCACAGAGCTCCCCCATCCAGGAATCCACTGCTCCCGA CCGCCACAGAGCTCCCCCATCTAGGAATCCACTGCTCCCGA < 41bp 0.504590421796906 0.752009727629655 0.89014447 0.39938802 prediction 0.494838611665499 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14578388 chr19:14578389 stopgain 0.016 0 22 hm5C_associated_SNPs_109025 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:14578389-14578390
64251 chr20 18297068 18297068 1 + C A OV 18297067 + 18297047 18297087 41 GGGGAGAGGCCGTATGTGTGCCGAGAGTGCGGGCGAGGCTT GGGGAGAGGCCGTATGTGTGCAGAGAGTGCGGGCGAGGCTT < 41bp 0.505335251238133 0.752743349086084 0.3179375 0.5028784 prediction 0.494816195695903 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18297067 chr20:18297068 synonymous SNV . 0 22 hm5C_associated_SNPs_109029 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr20:18297040-18297069
64251 chr19 11560122 11560122 1 + C T LUSC 11560121 + 11560101 11560141 41 AGAGACCATGGTGACCAGCACCACAGAGCCCAGTCGCTGCG AGAGACCATGGTGACCAGCACTACAGAGCCCAGTCGCTGCG < 41bp 0.548141424413043 0.7955156479935 0.106604695 0.5039986 prediction 0.494748447160913 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11560121 chr19:11560122 synonymous SNV . 0 22 hm5C_associated_SNPs_109035 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11560106-11560134
64251 chr11 610244 610244 1 + T G MESO 610242 + 610222 610262 41 CCCCGAGAAGGAGCCTGGGACATGGAGGATGTGGCCCCCAC CCCCGAGAAGGAGCCTGGGACAGGGAGGATGTGGCCCCCAC < 41bp 0.441944286672441 0.747359130031727 0.3787509 0.85869277 prediction 0.494718260063454 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:610242 chr11:610244 nonsynonymous SNV 0.090 1 23 hm5C_associated_SNPs_109039 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:610229-610245
64251 chr6 28058949 28058949 1 - G C rs35902873 28058950 - 28058930 28058970 41 CGCCACAGGACAATCGCTCACCAGGACCACACATCCTGGCC CGCCACAGGACAATCGCTCACGAGGACCACACATCCTGGCC < 41bp 0.590314373942589 0.837662281221 0.15102792 0.90338403 prediction 0.494695814556824 Functional Gain - ZSCAN12P1 ENSG00000219891 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr6:28058950 chr6:28058949 . . 0 22 hm5C_associated_SNPs_109042 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr6:28058917-28058954
64251 chr8 28385634 28385634 1 + T C UCEC 28385632 + 28385612 28385652 41 CCGGGGCATCTGGGAAACAACGTGGATACAAGAACGCTGCA CCGGGGCATCTGGGAAACAACGCGGATACAAGAACGCTGCA < 41bp 0.490263603795614 0.747304955132922 0.8024431 0.845075 prediction 0.494609910265845 Functional Gain - FZD3 ENSG00000104290 CDS Human protein_coding chr8:28385632 chr8:28385634 nonsynonymous SNV 0.993 5 23 hm5C_associated_SNPs_109046 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:28385625-28385650
64251 chr1 25812257 25812257 1 + C T UCEC 25812256 + 25812236 25812276 41 GTTAGAAGAAGCCACTGCTGCCCGGGCTGTTGCGTTTGCTG GTTAGAAGAAGCCACTGCTGCTCGGGCTGTTGCGTTTGCTG < 41bp 0.498000802514193 0.747294262842034 0.19357714 0.22420067 prediction 0.494588525684068 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25812256 chr1:25812257 synonymous SNV . 0 22 hm5C_associated_SNPs_109050 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:25812231-25812267
64251 chr19 10368916 10368916 1 + C T SKCM 10368915 + 10368895 10368935 41 CAGGAGGTGTTGCCCATGGCCCCCGGGGCCCCACAAGTTAC CAGGAGGTGTTGCCCATGGCCTCCGGGGCCCCACAAGTTAC < 41bp 0.532594146866613 0.779877953299052 0.15148452 0.19906095 prediction 0.494567612864879 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10368915 chr19:10368916 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_109054 0 0 7 BUD13 POSTAR2 ENCODE chr19:10368875-10368930
64251 chr22 50958034 50958034 1 + C A rs527410903 50958033 + 50958013 50958053 41 ACGGCAACCTGGGATGGCCGCCGGTTGCCAAGGCGCCTCTC ACGGCAACCTGGGATGGCCGCAGGTTGCCAAGGCGCCTCTC < 41bp 0.508577866789651 0.755849344089458 0.46783486 0.8399316 prediction 0.494542954599615 Functional Gain - NCAPH2 ENSG00000025770 UTR3 Human protein_coding chr22:50958033 chr22:50958034 . . 0 22 hm5C_associated_SNPs_109058 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50957913-50958089
64251 chr5 37701218 37701218 1 + C A UCEC 37701214 + 37701194 37701234 41 ATTTAATAAACCACTTTTTTCAGCCTCGGGTCTTCCCACCA ATTTAATAAACCACTTTTTTCAGCATCGGGTCTTCCCACCA < 41bp 0.353659847094051 0.7472625805984 0.21865496 0.17396632 prediction 0.4945251611968 Functional Gain - WDR70 ENSG00000082068 CDS Human protein_coding chr5:37701214 chr5:37701218 synonymous SNV . 0 25 hm5C_associated_SNPs_109060 0 0 1 U2AF2 POSTAR2 ENCODE chr5:37701127-37701219
64251 chr7 150068940 150068940 1 + C A PAAD 150068939 + 150068919 150068959 41 CGGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAA CGGGTGCACGTAGCTGAGGCCATGGAGGAGGCCGCAGCCAA < 41bp 0.503243283570096 0.750497206337308 0.7470023 0.8615864 prediction 0.494507845534423 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150068939 chr7:150068940 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_109064 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150068907-150068941
64251 chr1 25688482 25688482 1 + T A rs551912872 25688478 + 25688458 25688498 41 ACTTCCTCACGGTCACAGAACTAGTTTTTTAATCCTCAGGC ACTTCCTCACGGTCACAGAACTAGATTTTTAATCCTCAGGC < 41bp 0.536208207547515 0.783458335424721 0.20277625 0.26534116 prediction 0.494500255754413 Functional Gain - TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688478 chr1:25688482 . . 0 25 hm5C_associated_SNPs_109065 0 0 15 MOV10 POSTAR2 GSE37524,GSM921128 chr1:25688441-25688496
64251 chr10 70719916 70719916 1 + C A UCEC 70719915 + 70719895 70719935 41 GGAGAAACTAGAGAGAAAAGCCCCAAACTGAAGAATGGATT GGAGAAACTAGAGAGAAAAGCACCAAACTGAAGAATGGATT < 41bp 0.506875765640672 0.754120335173394 0.15354374 0.22153589 prediction 0.494489139065445 Functional Gain - DDX21 ENSG00000165732 CDS Human protein_coding chr10:70719915 chr10:70719916 nonsynonymous SNV 0.752 0 22 hm5C_associated_SNPs_109067 0 0 22 TARDBP POSTAR2 DRA001158,DRS012387 chr10:70719823-70719992
64251 chr16 28883214 28883214 1 + C T UCEC 28883213 + 28883193 28883233 41 CTTCCCCCAGAGTTGCCCCCCCGCATCCCCATTGAAGAGGG CTTCCCCCAGAGTTGCCCCCCTGCATCCCCATTGAAGAGGG < 41bp 0.475263804417722 0.747231296306625 0.07871902 0.1341362 prediction 0.494462592613249 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883213 chr16:28883214 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_109069 0 0 1 PPIG POSTAR2 ENCODE chr16:28883202-28883219
64251 chr10 45480371 45480371 1 + A G STAD 45480368 + 45480348 45480388 41 GCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTC GCGCCCCCGGTGAGGCCCAGCGCGTCCGGCGACACCGGTTC < 41bp 0.500328236959135 0.747550840942979 0.3382408 0.24260715 prediction 0.494445207967688 Functional Gain - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480368 chr10:45480371 nonsynonymous SNV 0.860 0 24 hm5C_associated_SNPs_109072 0 0 1 PPIG POSTAR2 ENCODE chr10:45480253-45480410
64251 chr17 17971230 17971230 1 + C A rs58364586 17971226 + 17971206 17971246 41 GTGCTGGACTTCCACCCACCCACCCTTTTCAAGTTTAGATA GTGCTGGACTTCCACCCACCCACCATTTTCAAGTTTAGATA < 41bp 0.38043032167426 0.747219668316967 0.011349201 0.0233275 prediction 0.494439336633934 Functional Gain - GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17971226 chr17:17971230 . . 0 25 hm5C_associated_SNPs_109073 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr17:17971230-17971231
64251 chr7 129098231 129098231 1 + C A THYM 129098227 + 129098207 129098247 41 TGGTGCCACCTCCACCCTCACAGGCACCCCTCTCTGCTGAG TGGTGCCACCTCCACCCTCACAGGAACCCCTCTCTGCTGAG < 41bp 0.680564752722168 0.927764143778659 0.9103503 0.9223566 prediction 0.494398782112982 Functional Gain - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129098227 chr7:129098231 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_109075 0 0 2 GRWD1 POSTAR2 ENCODE chr7:129098155-129098239
64251 chr17 41365218 41365218 1 + A G COAD 41365215 + 41365195 41365235 41 TGTGCCTTGTGAAGGAACTGCTGATGCCAGCTTCGTGACTT TGTGCCTTGTGAAGGAACTGCTGGTGCCAGCTTCGTGACTT < 41bp 0.500447125152576 0.74764630662876 0.14223248 0.25209063 prediction 0.494398362952367 Functional Gain - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41365215 chr17:41365218 nonsynonymous SNV 0.809 0 24 hm5C_associated_SNPs_109076 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr17:41365200-41365220
64251 chr19 42818989 42818989 1 + C T UCEC 42818988 + 42818968 42819008 41 TACCTGAGCTGCTCCAGTGGCCGCAGCTTCCGCTCAGTGCG TACCTGAGCTGCTCCAGTGGCTGCAGCTTCCGCTCAGTGCG < 41bp 0.527012305138187 0.77416841506045 0.3590263 0.7009335 prediction 0.494312219844525 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42818988 chr19:42818989 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109082 0 0 1 PPIG POSTAR2 ENCODE chr19:42818942-42819023
64251 chr2 5836140 5836140 1 + C G rs368853387 5836136 + 5836116 5836156 41 GGAGGGGCCTGGGTTGCCAGCTCCCTTGGTCGGGGTCCTGC GGAGGGGCCTGGGTTGCCAGCTCCGTTGGTCGGGGTCCTGC < 41bp 0.562623112342656 0.809779057642936 0.2164081 0.35311157 prediction 0.494311890600559 Functional Gain - SOX11 ENSG00000176887 UTR3 Human protein_coding chr2:5836136 chr2:5836140 . . 0 25 hm5C_associated_SNPs_109083 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr2:5836140-5836160
64251 chr6 26020981 26020981 1 + C A rs75579728 26020980 + 26020960 26021000 41 AGACCTGCGTTTCCAGAGCTCCGCTGTGATGGCTCTGCAGG AGACCTGCGTTTCCAGAGCTCAGCTGTGATGGCTCTGCAGG < 41bp 0.504554711403776 0.751699339836395 0.088912785 0.236644 prediction 0.494289256865238 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26020980 chr6:26020981 synonymous SNV . 0 22 hm5C_associated_SNPs_109086 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26020880-26021000
64251 chr16 74339460 74339460 1 + C A rs150615969 74339459 + 74339439 74339479 41 CTTGGCCTCGCTGATCCGTTCCGTGGTCGCCCTGCACAACC CTTGGCCTCGCTGATCCGTTCAGTGGTCGCCCTGCACAACC < 41bp 0.494022957355912 0.747143629405059 0.11607319 0.14727536 prediction 0.494287258810119 Functional Gain - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339459 chr16:74339460 synonymous SNV . 0 22 hm5C_associated_SNPs_109087 0 0 12 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:74339440-74339460
64251 chr10 106019527 106019527 1 + C A GBM 106019526 + 106019506 106019546 41 GACCCCTATGAGAAAGCTTGCCAGAAGATGATCTTAGAGTT GACCCCTATGAGAAAGCTTGCAAGAAGATGATCTTAGAGTT < 41bp 0.529185983732596 0.776311263871057 0.32183373 0.46521744 prediction 0.494250560276922 Functional Gain - GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106019526 chr10:106019527 nonsynonymous SNV 0.980 4 22 hm5C_associated_SNPs_109092 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr10:106019493-106019547
64251 chr3 52726942 52726942 1 + C G rs147065672 52726938 + 52726918 52726958 41 GATCACAATCATAGATAGTCCGAGCTTCATCGTATCTCCAC GATCACAATCATAGATAGTCCGAGGTTCATCGTATCTCCAC < 41bp 0.57105810553164 0.818174517189541 0.30139518 0.8429254 prediction 0.494232823315801 Functional Gain - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52726938 chr3:52726942 nonsynonymous SNV 0.079 0 25 hm5C_associated_SNPs_109096 0 0 21 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:52726867-52726946
64251 chr1 114524186 114524186 1 + C A LUAD 114524182 + 114524162 114524202 41 TCTATGTCGTCTATAACACCCGTCCTGCCAGTCGGGCCCGC TCTATGTCGTCTATAACACCCGTCATGCCAGTCGGGCCCGC < 41bp 0.326683252559532 0.747108605765663 0.16947281 0.25337663 prediction 0.494217211531326 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524182 chr1:114524186 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_109097 0 0 1 SND1 POSTAR2 ENCODE chr1:114524179-114524263
64251 chr1 33746006 33746006 1 + C T SKCM 33746005 + 33745985 33746025 41 GGTCCGCCTGTCCTTGTAGTCCCCTATCCCATCCTGGCCTC GGTCCGCCTGTCCTTGTAGTCTCCTATCCCATCCTGGCCTC < 41bp 0.529917732357487 0.777004331514498 0.10769662 0.25134093 prediction 0.494173198314021 Functional Gain - ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33746005 chr1:33746006 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_109101 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:33746005-33746006
64251 chr10 121587166 121587166 1 + T C rs149854387 121587164 + 121587144 121587184 41 TTACCCAAGCTGGATTAACCCATGGGATAAACTTTGCAGTG TTACCCAAGCTGGATTAACCCACGGGATAAACTTTGCAGTG < 41bp 0.552601050591618 0.799657264367407 0.21600926 0.1445255 prediction 0.494112427551577 Functional Gain - INPP5F ENSG00000198825 CDS Human protein_coding chr10:121587164 chr10:121587166 synonymous SNV . 0 23 hm5C_associated_SNPs_109108 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr10:121587165-121587166
64251 chr9 124089725 124089725 1 + C G rs567372749 124089721 + 124089701 124089741 41 AGGAGCTGCTCAGGGTGCTGCGGGCCCAACCTGTGCAGGTG AGGAGCTGCTCAGGGTGCTGCGGGGCCAACCTGTGCAGGTG < 41bp 0.57286029606047 0.819908738374655 0.9077034 0.92948025 prediction 0.49409688462837 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124089721 chr9:124089725 nonsynonymous SNV 0.979 0 25 hm5C_associated_SNPs_109112 0 0 5 NOL12 POSTAR2 ENCODE chr9:124089631-124089761
64251 chr1 154962678 154962678 1 + C G rs146865554 154962677 + 154962657 154962697 41 CCCCTCCAGATCCTGTATATCCGCAGCATCTCCCCTTTCCC CCCCTCCAGATCCTGTATATCGGCAGCATCTCCCCTTTCCC < 41bp 0.615746590927138 0.862793340019817 0.21814707 0.88213 prediction 0.494093498185358 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962677 chr1:154962678 nonsynonymous SNV 0.978 2 22 hm5C_associated_SNPs_109113 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:154962665-154962710
64251 chr18 9535701 9535701 1 + T C LIHC 9535699 + 9535679 9535719 41 ATCATTTGAATCAAGCAATTCATGAGGAGCGCGAGGCCATC ATCATTTGAATCAAGCAATTCACGAGGAGCGCGAGGCCATC < 41bp 0.567258167893036 0.81430186268796 0.14960787 0.1341852 prediction 0.494087389589847 Functional Gain - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9535699 chr18:9535701 synonymous SNV . 0 23 hm5C_associated_SNPs_109114 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr18:9535693-9535711
64251 chr19 44514462 44514462 1 + C A STAD 44514458 + 44514438 44514478 41 GAAGCAGGACCACATGAAGACTGCCCTTGCCAGCAAATCTG GAAGCAGGACCACATGAAGACTGCACTTGCCAGCAAATCTG < 41bp 0.368238966525976 0.747030537617945 0.059589237 0.1260567 prediction 0.49406107523589 Functional Gain - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514458 chr19:44514462 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_109118 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44514450-44514467
64251 chr2 15770942 15770942 1 + T G UCEC 15770939 + 15770919 15770959 41 TGTGGATATTTTGGCACCTACTGTTCAAGAGTTGGCTGCCC TGTGGATATTTTGGCACCTACTGGTCAAGAGTTGGCTGCCC < 41bp 0.36114785187615 0.747028730837866 0.090539426 0.07112822 prediction 0.494057461675733 Functional Gain - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15770939 chr2:15770942 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_109119 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:15770912-15770948
64251 chr15 41857305 41857305 1 + A G UCEC 41857302 + 41857282 41857322 41 TGTGGCCTGGATGCCAGGTGCTGATGGCCGAGCTCTGCTAC TGTGGCCTGGATGCCAGGTGCTGGTGGCCGAGCTCTGCTAC < 41bp 0.514850815554871 0.761863335176241 0.4337375 0.70492584 prediction 0.494025039242741 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41857302 chr15:41857305 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_109125 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41857277-41857329
64251 chr1 52880495 52880495 1 + C T UCEC 52880494 + 52880474 52880514 41 AGACGTCACCGCAGCAGGTCCCGAGATCGGCGGCACAGATC AGACGTCACCGCAGCAGGTCCTGAGATCGGCGGCACAGATC < 41bp 0.494505765400701 0.747006846293291 0.2683949 0.22259533 prediction 0.494013692586583 Functional Gain - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52880494 chr1:52880495 stopgain 0.985 1 22 hm5C_associated_SNPs_109126 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:52880464-52880507
64251 chr7 97833423 97833423 1 + C A THCA 97833422 + 97833402 97833442 41 CCGCACTCGGCGCCTTACTCCCGGTTCTCCATCTCTCCCGC CCGCACTCGGCGCCTTACTCCAGGTTCTCCATCTCTCCCGC < 41bp 0.482423823149716 0.746997585373448 0.92814845 0.94661736 prediction 0.493995170746897 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97833422 chr7:97833423 synonymous SNV . 0 22 hm5C_associated_SNPs_109128 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:97833404-97833455
64251 chr19 50434202 50434202 1 + C G rs150555056 50434198 + 50434178 50434218 41 TCGTAGACTATGGGAAACTCCCCCCGGCCCCTGCCCCCCTG TCGTAGACTATGGGAAACTCCCCCGGGCCCCTGCCCCCCTG < 41bp 0.471306929800299 0.746994686622156 0.060148835 0.06761956 prediction 0.493989373244312 Functional Gain - ATF5 ENSG00000169136 CDS Human protein_coding chr19:50434198 chr19:50434202 nonsynonymous SNV 0.964 0 25 hm5C_associated_SNPs_109130 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50434172-50434202
64251 chr7 6628279 6628279 1 + T C COAD 6628277 + 6628257 6628297 41 CTGACTTTTCCACGGATTGTCTTCATGCTGGGCTTTGTCGT CTGACTTTTCCACGGATTGTCTCCATGCTGGGCTTTGTCGT < 41bp 0.590264693921955 0.837257363572309 0.22362995 0.9736222 prediction 0.493985339300709 Functional Gain - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628277 chr7:6628279 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_109131 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6628245-6628283
64251 chr5 140595934 140595934 1 + C G LUAD 140595933 + 140595913 140595953 41 AGCGGCACCAGGACCCTATCCCAGAGCTACCAGTATGAGGT AGCGGCACCAGGACCCTATCCGAGAGCTACCAGTATGAGGT < 41bp 0.602444542817085 0.849434599668343 0.88633275 0.8473499 prediction 0.493980113702515 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595933 chr5:140595934 nonsynonymous SNV 0.026 1 22 hm5C_associated_SNPs_109133 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140595884-140595935
64251 chr5 434146 434146 1 + C A rs111768223 434145 + 434125 434165 41 CCCTCCCTGCGCCCCATGCCCCGCGGCTCCTGCCTGCCCTG CCCTCCCTGCGCCCCATGCCCAGCGGCTCCTGCCTGCCCTG < 41bp 0.533314647836926 0.780293297195927 0.660372 0.8990125 prediction 0.493957298718003 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:434145 chr5:434146 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_109136 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:434119-434164
64251 chr19 58983457 58983457 1 + C G rs201793822 58983453 + 58983433 58983473 41 GGGCATCATCAGAAGGTGCGCCAGCGAAGGAAACCGAGCCC GGGCATCATCAGAAGGTGCGCCAGGGAAGGAAACCGAGCCC < 41bp 0.554659331240556 0.801635646566236 0.5769546 0.8022851 prediction 0.49395263065136 Functional Gain - ZNF324 ENSG00000083812 CDS Human protein_coding chr19:58983453 chr19:58983457 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_109137 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr19:58983440-58983460
64251 chr19 45157173 45157173 1 + C T SKCM 45157172 + 45157152 45157192 41 GTATCCATTTCCTGCAGACCCCCCAGAGGTATCCATCTCTG GTATCCATTTCCTGCAGACCCTCCAGAGGTATCCATCTCTG < 41bp 0.552775869388007 0.799752165943913 0.013556719 0.955017 prediction 0.493952593111812 Functional Gain - PVR ENSG00000073008 CDS Human protein_coding chr19:45157172 chr19:45157173 synonymous SNV . 0 22 hm5C_associated_SNPs_109138 0 0 3 BUD13 POSTAR2 ENCODE chr19:45157114-45157200
64251 chr7 129396034 129396034 1 + C A rs80150480 129396033 + 129396013 129396053 41 CGTCCTAGACCAGGATACACCCGTGGGAGCAATTTTCTCTA CGTCCTAGACCAGGATACACCAGTGGGAGCAATTTTCTCTA < 41bp 0.534105338214332 0.781063946208202 0.17366123 0.37322146 prediction 0.493917215987739 Functional Gain - NRF1 ENSG00000106459 UTR3 Human protein_coding chr7:129396033 chr7:129396034 . . 0 22 hm5C_associated_SNPs_109144 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129396010-129396041
64251 chrX 49029495 49029495 1 + T C LUAD 49029493 + 49029473 49029513 41 CAGATATTATGCCTGGTGATCCTGATCTGCTTCAGTGCCTC CAGATATTATGCCTGGTGATCCCGATCTGCTTCAGTGCCTC < 41bp 0.469314230141104 0.746957870768582 0.2629915 0.22834915 prediction 0.493915741537165 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49029493 chrX:49029495 nonsynonymous SNV 0.993 3 23 hm5C_associated_SNPs_109146 0 0 11 METTL14 POSTAR2 GSE46705,GSM1135009 chrX:49029477-49029495
64251 chr12 72148967 72148967 1 + T G SKCM 72148965 + 72148945 72148985 41 GGCGGCGGGCCGAGCCTACTCGTTCAAGGTGGTGCTGCTGG GGCGGCGGGCCGAGCCTACTCGGTCAAGGTGGTGCTGCTGG < 41bp 0.634230065288461 0.881186966322178 0.054123312 0.12491137 prediction 0.493913802067434 Functional Gain - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72148965 chr12:72148967 nonsynonymous SNV 0.978 4 23 hm5C_associated_SNPs_109147 0 0 15 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr12:72148946-72148972
64251 chr19 1073169 1073169 1 + C T STAD 1073168 + 1073148 1073188 41 ACCTCCTTGAGGCCCGCCGCCCGCGGGCCCACGAGTGCCTG ACCTCCTTGAGGCCCGCCGCCTGCGGGCCCACGAGTGCCTG < 41bp 0.502367792806856 0.749297419801425 0.1236949 0.17235059 prediction 0.493859253989137 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1073168 chr19:1073169 nonsynonymous SNV 0.057 3 22 hm5C_associated_SNPs_109151 0 0 1 PPIG POSTAR2 ENCODE chr19:1073147-1073186
64251 chr1 178433445 178433445 1 + C T SKCM 178433444 + 178433424 178433464 41 TGTGGACTCTGCCACAATGTCCCCAGTAGAGAGGACAGCAG TGTGGACTCTGCCACAATGTCTCCAGTAGAGAGGACAGCAG < 41bp 0.472036395509324 0.746928367987805 0.08436018 0.94027734 prediction 0.493856735975609 Functional Gain - RASAL2 ENSG00000075391 CDS Human protein_coding chr1:178433444 chr1:178433445 synonymous SNV . 0 22 hm5C_associated_SNPs_109153 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:178433440-178433460
64251 chr1 100534099 100534099 1 + C T UCEC 100534098 + 100534078 100534118 41 CAGTGTTTCTCTCCTACCTACCGGAGGCAGGCCAATATTCC CAGTGTTTCTCTCCTACCTACTGGAGGCAGGCCAATATTCC < 41bp 0.513858279941966 0.760748176864619 0.7694104 0.49514577 prediction 0.493779793845307 Functional Gain - MFSD14A ENSG00000156875 CDS Human protein_coding chr1:100534098 chr1:100534099 nonsynonymous SNV 0.649 4 22 hm5C_associated_SNPs_109164 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:100534078-100534110
64251 chr9 2047439 2047439 1 + C T UCEC 2047438 + 2047418 2047458 41 GCATCAGCCCCATCCAGAAACCGCAAGGCCTGGACCCCGTG GCATCAGCCCCATCCAGAAACTGCAAGGCCTGGACCCCGTG < 41bp 0.532832572261083 0.779716684236227 0.0795539 0.52106875 prediction 0.493768223950288 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2047438 chr9:2047439 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_109165 0 0 1 BUD13 POSTAR2 ENCODE chr9:2047426-2047472
64251 chr12 121154713 121154713 1 + C T COAD 121154712 + 121154692 121154732 41 GACAAACCTGTTTCAAACTTCCGGATGATCGAACGGCACTA GACAAACCTGTTTCAAACTTCTGGATGATCGAACGGCACTA < 41bp 0.498821678164466 0.746881113380796 0.55584794 0.44289103 prediction 0.493762226761592 Functional Gain - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154712 chr12:121154713 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109166 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:121154705-121154731
64251 chr1 44685933 44685933 1 + C A rs144125108 44685932 + 44685912 44685952 41 ACCCGGACTTGGTCCTGACCCCAAGGACACCATCATTGATG ACCCGGACTTGGTCCTGACCCAAAGGACACCATCATTGATG < 41bp 0.521702063642347 0.7685797644181 0.027302653 0.11213872 prediction 0.493755401551506 Functional Gain - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44685932 chr1:44685933 synonymous SNV . 0 22 hm5C_associated_SNPs_109170 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44685920-44685940
64251 chr4 77940350 77940350 1 + C T UCEC 77940349 + 77940329 77940369 41 ATTTGCAGTGGTTGGCAGCACCGAAGAGGTGAAGATTGGCA ATTTGCAGTGGTTGGCAGCACTGAAGAGGTGAAGATTGGCA < 41bp 0.521392274064009 0.768268561672835 0.10253981 0.10164741 prediction 0.493752575217651 Functional Gain - SEPT11 ENSG00000138758 CDS Human protein_coding chr4:77940349 chr4:77940350 synonymous SNV . 0 22 hm5C_associated_SNPs_109171 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:77940321-77940351
64251 chr1 33944950 33944950 1 + C T SKCM 33944949 + 33944929 33944969 41 CAGCCAGAGCCTGAAGAACTCCTGATTGTGAAACTGGAAGA CAGCCAGAGCCTGAAGAACTCTTGATTGTGAAACTGGAAGA < 41bp 0.510727589448686 0.757603298714582 0.2306315 0.19580701 prediction 0.493751418531793 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33944949 chr1:33944950 synonymous SNV . 0 22 hm5C_associated_SNPs_109172 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:33944929-33944950
64251 chr14 78392291 78392291 1 + T C LUAD 78392289 + 78392269 78392309 41 AGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGTAGG AGAGGCATCAGCCAAGCTCCCGCCACTGCCACTGAGGTAGG < 41bp 0.55308882564818 0.799946414281781 0.1889815 0.30352205 prediction 0.493715177267203 Functional Gain - ADCK1 ENSG00000063761 CDS Human protein_coding chr14:78392289 chr14:78392291 nonsynonymous SNV 0.990 1 23 hm5C_associated_SNPs_109175 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:78392260-78392298
64251 chr17 7324510 7324510 1 + A G rs79167477 7324507 + 7324487 7324527 41 GTTCCCTGGTCTCAGGATGCCCCAGAGTCCCCTCCCCAGAC GTTCCCTGGTCTCAGGATGCCCCGGAGTCCCCTCCCCAGAC < 41bp 0.502150670510723 0.748986853449833 0.45505396 0.39916813 prediction 0.493672365878221 Functional Gain - SPEM1 ENSG00000181323 CDS Human protein_coding chr17:7324507 chr17:7324510 synonymous SNV . 0 24 hm5C_associated_SNPs_109177 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7324461-7324511
64251 chr11 10517277 10517277 1 + T A UCEC 10517273 + 10517253 10517293 41 GCTGGATCATCCAGGTGCCCCGGATTTAGTAAGTGAGGTGG GCTGGATCATCCAGGTGCCCCGGAATTAGTAAGTGAGGTGG < 41bp 0.42650904367649 0.746825819256785 0.35894632 0.5108052 prediction 0.493651638513571 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10517273 chr11:10517277 nonsynonymous SNV 0.986 5 25 hm5C_associated_SNPs_109179 0 0 2 BUD13 POSTAR2 ENCODE chr11:10517246-10517329
64251 chrX 129148439 129148439 1 + C T SKCM 129148438 + 129148418 129148458 41 CTGCCAAGGTGCTTCCAACTCCACAGCCTCTGCTGCCAGCC CTGCCAAGGTGCTTCCAACTCTACAGCCTCTGCTGCCAGCC < 41bp 0.517182984506111 0.76399163758738 0.24564788 0.46646568 prediction 0.493617306162538 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148438 chrX:129148439 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_109182 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chrX:129148414-129148441
64251 chr12 109536034 109536034 1 + C G rs3219209 109536033 + 109536013 109536053 41 AGCCATAGGGCGCCTCCCAGCCCGTCTCCCCGCTCCAGTTT AGCCATAGGGCGCCTCCCAGCGCGTCTCCCCGCTCCAGTTT < 41bp 0.556725915869295 0.803516552998416 0.03863284 0.44319046 prediction 0.493581274258243 Functional Gain - UNG ENSG00000076248 UTR5 Human protein_coding chr12:109536033 chr12:109536034 . . 0 22 hm5C_associated_SNPs_109187 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:109536020-109536058
64251 chr7 35913364 35913364 1 + T C PRAD 35913362 + 35913342 35913382 41 AGGGTGCAGTGTTGTTTATACTTCATTGCTCCTTCAGGACA AGGGTGCAGTGTTGTTTATACTCCATTGCTCCTTCAGGACA < 41bp 0.607475858722064 0.854258867637936 0.097519934 0.9487374 prediction 0.493566017831745 Functional Gain - SEPT7 ENSG00000122545 CDS Human protein_coding chr7:35913362 chr7:35913364 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_109192 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:35913336-35913381
64251 chr14 74167512 74167512 1 + T G rs77394145 74167510 + 74167490 74167530 41 TGTTTAATGTGTCTGTAAATCATGAAATATAAAAGCAAGAT TGTTTAATGTGTCTGTAAATCAGGAAATATAAAAGCAAGAT < 41bp 0.553418000291024 0.800194939109758 0.26296675 0.8234179 prediction 0.493553877637467 Functional Gain - DNAL1 ENSG00000119661 UTR3 Human protein_coding chr14:74167510 chr14:74167512 . . 0 23 hm5C_associated_SNPs_109195 1 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:74167507-74167533
64251 chr1 52252285 52252285 1 + C T UCEC 52252284 + 52252264 52252304 41 GATCAGAACGAGTATGAATCCCGCAGGTAAGCCGACATTGT GATCAGAACGAGTATGAATCCTGCAGGTAAGCCGACATTGT < 41bp 0.503526141838894 0.750300649057108 0.7134501 0.3652377 prediction 0.493549014436429 Functional Gain - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52252284 chr1:52252285 nonsynonymous SNV 0.700 4 22 hm5C_associated_SNPs_109196 0 0 6 GPKOW POSTAR2 ENCODE chr1:52252198-52252356
64251 chr2 71357884 71357884 1 + C A rs80028181 71357880 + 71357860 71357900 41 CGGGTCGGCCCGAGTGCTTCCTCACGTAAGTGCGCAGATCC CGGGTCGGCCCGAGTGCTTCCTCAAGTAAGTGCGCAGATCC < 41bp 0.672241198459257 0.91901131621427 0.06421992 0.58677876 prediction 0.493540235510025 Functional Gain - MPHOSPH10 ENSG00000124383 CDS Human protein_coding chr2:71357880 chr2:71357884 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_109197 0 0 4 DDX3X POSTAR2 ENCODE chr2:71357731-71357885
64251 chr2 3392330 3392330 1 + C G rs371685284 3392329 + 3392309 3392349 41 GAGGAACGACGCCTGGCTTCCCGGCGAGGCTACGCGTGGAG GAGGAACGACGCCTGGCTTCCGGGCGAGGCTACGCGTGGAG < 41bp 0.61487373600675 0.861561437334189 0.42749584 0.9028098 prediction 0.493375402654876 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3392329 chr2:3392330 synonymous SNV . 0 22 hm5C_associated_SNPs_109209 0 0 2 RBM15 POSTAR2 ENCODE chr2:3392268-3392348
64251 chr6 10702868 10702868 1 + T G COAD 10702866 + 10702846 10702886 41 GTCGGTTGGTACAGATAAAACTTTAAGGTAAGTCATTAATG GTCGGTTGGTACAGATAAAACTGTAAGGTAAGTCATTAATG < 41bp 0.434735181869429 0.746684900867623 0.2884903 0.3083885 prediction 0.493369801735246 Functional Gain - PAK1IP1 ENSG00000111845 CDS Human protein_coding chr6:10702866 chr6:10702868 nonsynonymous SNV 0.981 2 23 hm5C_associated_SNPs_109211 0 0 4 EFTUD2 POSTAR2 ENCODE chr6:10702809-10702882
64251 chr18 43754147 43754147 1 + C A rs116268127 43754143 + 43754123 43754163 41 TGACCGCGACCCACTGCTCGCTGCCGGGGCTTGTTCCGAGG TGACCGCGACCCACTGCTCGCTGCAGGGGCTTGTTCCGAGG < 41bp 0.638797632189932 0.885460098779079 0.25652346 0.48238793 prediction 0.493324933178296 Functional Gain - C18orf25 ENSG00000152242 UTR5 Human protein_coding chr18:43754143 chr18:43754147 . . 0 25 hm5C_associated_SNPs_109218 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:43754130-43754150
64251 chr10 104161038 104161038 1 + C T ESCA 104161037 + 104161017 104161057 41 GAAGGGCCTGAGAAGGACACCCGAAGCAGCTTCCGGGGCCA GAAGGGCCTGAGAAGGACACCTGAAGCAGCTTCCGGGGCCA < 41bp 0.505176337140535 0.751834344778726 0.3995602 0.45237613 prediction 0.493316015276382 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104161037 chr10:104161038 stopgain 0.104 0 22 hm5C_associated_SNPs_109221 0 0 1 FXR2 POSTAR2 ENCODE chr10:104161024-104161078
64251 chrX 49104124 49104124 1 + T A UCEC 49104120 + 49104100 49104140 41 GGCCTCCCAGGTCACGTGGGCAGCTCAGGAACAGGAGCTCG GGCCTCCCAGGTCACGTGGGCAGCACAGGAACAGGAGCTCG < 41bp 0.420833388751335 0.746657499107825 0.74179816 0.7674008 prediction 0.493314998215651 Functional Gain - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49104120 chrX:49104124 synonymous SNV . 0 25 hm5C_associated_SNPs_109222 0 0 3 EFTUD2 POSTAR2 ENCODE chrX:49104061-49104142
64251 chr9 133491892 133491892 1 + C A UCEC 133491888 + 133491868 133491908 41 CATCGGCAGAGGAGGGGAAACAATCAAGCAGTTGCAGGTGT CATCGGCAGAGGAGGGGAAACAATAAAGCAGTTGCAGGTGT < 41bp 0.326094070766847 0.746649879363521 0.8699603 0.8990884 prediction 0.493299758727043 Functional Gain - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133491888 chr9:133491892 synonymous SNV . 0 25 hm5C_associated_SNPs_109223 0 0 6 BUD13 POSTAR2 ENCODE chr9:133491861-133491913
64251 chr19 4472309 4472309 1 + T G rs370094502 4472306 + 4472286 4472326 41 GCCGCCGCAGCCGCTACCGCCGCTGCAGCCGCTTTCCGCGG GCCGCCGCAGCCGCTACCGCCGCGGCAGCCGCTTTCCGCGG < 41bp 0.65674361902325 0.903364844770598 0.24529213 0.86924994 prediction 0.493242451494695 Functional Gain - HDGFL2 ENSG00000167674 UTR5 Human protein_coding chr19:4472306 chr19:4472309 . . 0 24 hm5C_associated_SNPs_109228 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:4472300-4472320
64251 chr10 14885501 14885501 1 + C T COAD 14885500 + 14885480 14885520 41 AGCCCCTGCACCAGCACCAACCGCAGCACTCCTGGGGTAGC AGCCCCTGCACCAGCACCAACTGCAGCACTCCTGGGGTAGC < 41bp 0.491997061389595 0.746612577867343 0.82186884 0.8356393 prediction 0.493225155734686 Functional Gain - HSPA14 ENSG00000187522 CDS Human protein_coding chr10:14885500 chr10:14885501 nonsynonymous SNV 0.051 1 22 hm5C_associated_SNPs_109229 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:14885498-14885532
64251 chr11 20404613 20404613 1 + T G rs3824886 20404610 + 20404590 20404630 41 TCCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGCCTGT TCCTTACCAGACTCTTGGGCCAGGGGGCATTCTGTGCCTGT < 41bp 0.351635225729667 0.746612355218675 0.2925134 0.88554406 prediction 0.49322471043735 Functional Gain - HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20404610 chr11:20404613 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_109230 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:20404603-20404641
64251 chr17 57270979 57270979 1 + C G CESC 57270975 + 57270955 57270995 41 TCCAAAGCTGTGCTTCCTCCCACACTGCCACAGCCAGCCAG TCCAAAGCTGTGCTTCCTCCCACAGTGCCACAGCCAGCCAG < 41bp 0.457952534368296 0.746605733967689 0.108665526 0.31320935 prediction 0.493211467935379 Functional Gain - PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270975 chr17:57270979 nonsynonymous SNV 0.015 0 25 hm5C_associated_SNPs_109232 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:57270939-57270987
64251 chr19 731176 731176 1 + A G rs76698799 731173 + 731153 731193 41 GAGAACGCGGCGGCCCCGAGCCCAGTCCGGGCCCCAGCCCC GAGAACGCGGCGGCCCCGAGCCCGGTCCGGGCCCCAGCCCC < 41bp 0.491462934296699 0.746583257610015 0.26287562 0.38427094 prediction 0.493166515220029 Functional Gain - PALM ENSG00000099864 CDS Human protein_coding chr19:731173 chr19:731176 synonymous SNV . 0 24 hm5C_associated_SNPs_109238 0 0 1 PPIG POSTAR2 ENCODE chr19:731133-731255
64251 chr2 27276399 27276399 1 + C T CESC 27276398 + 27276378 27276418 41 CTTTGTGCGCACACTGCCCACCCGGCCACGCTGGGAACGCA CTTTGTGCGCACACTGCCCACTCGGCCACGCTGGGAACGCA < 41bp 0.527385399820556 0.773968611552702 0.01551497 0.015753835 prediction 0.493166423464291 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27276398 chr2:27276399 synonymous SNV . 0 22 hm5C_associated_SNPs_109239 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27276379-27276418
64251 chr19 15752358 15752358 1 + T A LUAD 15752354 + 15752334 15752374 41 TGGACCTATACCTTCTATGACAACTGCTGCCGCCTCCGGTG TGGACCTATACCTTCTATGACAACAGCTGCCGCCTCCGGTG < 41bp 0.439242746716829 0.746582523525638 0.06135544 0.053849936 prediction 0.493165047051277 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15752354 chr19:15752358 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_109240 0 0 1 GRWD1 POSTAR2 ENCODE chr19:15752328-15752397
64251 chr1 90179960 90179960 1 + C G COAD 90179956 + 90179936 90179976 41 CGTATTCCTCATGCTGTGTTCAGCCTACTCAGCCTCCAGGA CGTATTCCTCATGCTGTGTTCAGCGTACTCAGCCTCCAGGA < 41bp 0.477144150006391 0.746571037725557 0.38209927 0.7630196 prediction 0.493142075451114 Functional Gain - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90179956 chr1:90179960 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_109243 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:90179925-90179963
64251 chr19 44352520 44352520 1 + T C COAD 44352518 + 44352498 44352538 41 GGGGTTCAAGCCTAGTTAAGCATGAGAGAGTCCATACTAAT GGGGTTCAAGCCTAGTTAAGCACGAGAGAGTCCATACTAAT < 41bp 0.526945481367091 0.773512192482103 0.24221721 0.27583313 prediction 0.493133422230024 Functional Gain - ZNF283 ENSG00000167637 CDS Human protein_coding chr19:44352518 chr19:44352520 synonymous SNV . 0 23 hm5C_associated_SNPs_109244 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44352511-44352530
64251 chr21 44192566 44192566 1 + C A BLCA 44192562 + 44192542 44192582 41 GTTCCAGTTACAGAAGAAGACTGACAGCTTGACGTCTGGGG GTTCCAGTTACAGAAGAAGACTGAAAGCTTGACGTCTGGGG < 41bp 0.385625163164813 0.746559420563859 0.04575017 0.10315806 prediction 0.493118841127717 Functional Gain - PDE9A ENSG00000160191 CDS Human protein_coding chr21:44192562 chr21:44192566 nonsynonymous SNV 0.011 0 25 hm5C_associated_SNPs_109246 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr21:44192566-44192567
64251 chr20 48553029 48553029 1 + T C UCEC 48553027 + 48553007 48553047 41 GAGGCTGACCCCCTAGGACGCTTCACGTGTCCCGTGTGCTT GAGGCTGACCCCCTAGGACGCTCCACGTGTCCCGTGTGCTT < 41bp 0.531946501365692 0.77849999050789 0.49987817 0.8983111 prediction 0.493106978284396 Functional Gain - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48553027 chr20:48553029 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_109250 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:48553011-48553070
64251 chr6 348220 348220 1 + C G LGG 348219 + 348199 348239 41 TGGGAGATCCTGTGCCAACCCCAACGTGGGCTTCCAGAGAC TGGGAGATCCTGTGCCAACCCGAACGTGGGCTTCCAGAGAC < 41bp 0.428947777676658 0.746549114355663 0.15807581 0.20806342 prediction 0.493098228711326 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:348219 chr6:348220 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_109253 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:348206-348256
64251 chr18 59854885 59854885 1 + T G KIRC 59854883 + 59854863 59854903 41 GCGCCGGAAGTGGCCTAGATCCTGGCTCTGCGGGCTCGCTG GCGCCGGAAGTGGCCTAGATCCGGGCTCTGCGGGCTCGCTG < 41bp 0.64769919506766 0.894241960006398 0.90034056 0.9358711 prediction 0.493085529877476 Functional Gain - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59854883 chr18:59854885 synonymous SNV . 0 23 hm5C_associated_SNPs_109255 0 0 2 EIF3H POSTAR2 ENCODE chr18:59854839-59854959
64251 chr1 156100489 156100489 1 + C T rs80356805 156100488 + 156100468 156100508 41 TCTGCTGAACTCCAAGGAGGCCGCACTGAGCACTGCTCTCA TCTGCTGAACTCCAAGGAGGCTGCACTGAGCACTGCTCTCA < 41bp 0.509421188672269 0.755955421436761 0.1837554 0.24213412 prediction 0.493068465528983 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156100488 chr1:156100489 synonymous SNV . 0 22 hm5C_associated_SNPs_109256 2 0 10 LIN28B POSTAR2 GSE44616,GSM1087851 chr1:156100465-156100493
64251 chr21 45499524 45499524 1 + C T SKCM 45499523 + 45499503 45499543 41 CTGGCTGAGGGCTGGGCACTCCCCATCACACACACAAGGAA CTGGCTGAGGGCTGGGCACTCTCCATCACACACACAAGGAA < 41bp 0.578127116332446 0.82465426706195 0.14782476 0.95397866 prediction 0.493054301459008 Functional Gain - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45499523 chr21:45499524 nonsynonymous SNV 0.800 1 22 hm5C_associated_SNPs_109260 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45499487-45499525
64251 chr17 7577561 7577561 1 - A C COAD 7577564 - 7577544 7577584 41 CACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCAT CACTACAACTACATGTGTAACAGGTCCTGCATGGGCGGCAT < 41bp 0.381542631510776 0.746525796678278 0.24011141 0.42974272 prediction 0.493051593356556 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577564 chr17:7577561 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_109261 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:7577509-7577567
64251 chr3 32409437 32409437 1 + C T SKCM 32409436 + 32409416 32409456 41 TAGATGCATCTTCCGTCTCCCCTGAGAGGGACAGTCACAAC TAGATGCATCTTCCGTCTCCCTTGAGAGGGACAGTCACAAC < 41bp 0.527070063973107 0.773594800967907 0.0094617605 0.0065401495 prediction 0.493049473989599 Functional Gain - CMTM8 ENSG00000170293 CDS Human protein_coding chr3:32409436 chr3:32409437 nonsynonymous SNV 0.331 0 22 hm5C_associated_SNPs_109262 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr3:32409402-32409437
64251 chr11 2418136 2418136 1 + C G rs10645 2418135 + 2418115 2418155 41 ACAGGGACCTCTGCAGTGCCCCCTAAGTGACCCGGACACTT ACAGGGACCTCTGCAGTGCCCGCTAAGTGACCCGGACACTT < 41bp 0.442184621833025 0.746520478966578 0.089135945 0.20250809 prediction 0.493040957933156 Functional Gain - CD81 ENSG00000110651 UTR3 Human protein_coding chr11:2418135 chr11:2418136 . . 0 22 hm5C_associated_SNPs_109265 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:2418033-2418683
64251 chr10 1038588 1038588 1 + C T SKCM 1038587 + 1038567 1038607 41 TCACAAATTCTAACAGATTTCCCCAAATTGGATGTAAGTGA TCACAAATTCTAACAGATTTCTCCAAATTGGATGTAAGTGA < 41bp 0.498220242801378 0.746518985428378 0.10387632 0.94310385 prediction 0.493037970856755 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1038587 chr10:1038588 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_109266 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:1038533-1038594
64251 chr19 49507641 49507641 1 + C G BLCA 49507637 + 49507617 49507657 41 CGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGA CGGTCGGGCAGTCCTTATTGCTGGGCAGCCGGGCACGGGGA < 41bp 0.592231575351482 0.838740396821423 0.26307923 0.32005912 prediction 0.493017642939883 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49507637 chr19:49507641 synonymous SNV . 0 25 hm5C_associated_SNPs_109267 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:49507627-49507653
64251 chr16 84691159 84691159 1 + T C BLCA 84691157 + 84691137 84691177 41 AAGAACGACCTGCTGCACCGCGTCAAGCCGGCCGTGTGCTC AAGAACGACCTGCTGCACCGCGCCAAGCCGGCCGTGTGCTC < 41bp 0.546394748518735 0.792903342432479 0.08932981 0.024527073 prediction 0.493017187827488 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84691157 chr16:84691159 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_109268 0 0 1 RBM15 POSTAR2 ENCODE chr16:84691158-84691192
64251 chr8 91049142 91049142 1 + C A KIRC 91049138 + 91049118 91049158 41 TTTTGTAGTACCAAGTGCTTCTGCCAAAGCAGGTGTGGAAG TTTTGTAGTACCAAGTGCTTCTGCAAAAGCAGGTGTGGAAG < 41bp 0.312813540235514 0.74650175375111 0.3585623 0.76421374 prediction 0.493003507502219 Functional Gain - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91049138 chr8:91049142 synonymous SNV . 0 25 hm5C_associated_SNPs_109270 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr8:91049132-91049163
64251 chr1 11810409 11810409 1 + C G rs537059896 11810405 + 11810385 11810425 41 GGCCAGGAGCCCCCATGGGCCGCCCAGTACCATGCACACTC GGCCAGGAGCCCCCATGGGCCGCCGAGTACCATGCACACTC < 41bp 0.575270051071785 0.821771098872445 0.15709385 0.3581642 prediction 0.49300209560132 Functional Gain - AGTRAP ENSG00000177674 UTR3 Human protein_coding chr1:11810405 chr1:11810409 . . 0 25 hm5C_associated_SNPs_109271 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:11810376-11810499
64251 chr20 61588214 61588214 1 + C A COAD 61588213 + 61588193 61588233 41 ATCTGCACCGTCTCCATGAGCCAGGACTTCGGCTGGAACAA ATCTGCACCGTCTCCATGAGCAAGGACTTCGGCTGGAACAA < 41bp 0.531300298744673 0.777793094106061 0.5213682 0.7460558 prediction 0.492985590722775 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61588213 chr20:61588214 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_109272 0 0 2 GRWD1 POSTAR2 ENCODE chr20:61588201-61588263
64251 chr17 79073793 79073793 1 + C G rs146015006 79073792 + 79073772 79073812 41 CGTGTCCGACGGCTACAAGACCGCACTGACAGAGGAGCGCA CGTGTCCGACGGCTACAAGACGGCACTGACAGAGGAGCGCA < 41bp 0.611349434784218 0.857827049482996 0.035452962 0.06578019 prediction 0.492955229397556 Functional Gain - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79073792 chr17:79073793 synonymous SNV . 0 22 hm5C_associated_SNPs_109277 0 0 1 GRWD1 POSTAR2 ENCODE chr17:79073729-79073869
64251 chr7 155503997 155503997 1 + C T HNSC 155503996 + 155503976 155504016 41 CGCTGCTTCCGGTGCAGCACCCGCACCACCCATCCCCGCCT CGCTGCTTCCGGTGCAGCACCTGCACCACCCATCCCCGCCT < 41bp 0.485335950809139 0.746472758400375 0.19581404 0.3164005 prediction 0.492945516800749 Functional Gain - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155503996 chr7:155503997 nonsynonymous SNV 0.573 0 22 hm5C_associated_SNPs_109278 0 0 1 GRWD1 POSTAR2 ENCODE chr7:155503972-155504005
64251 chr14 45432386 45432386 1 + C A UCEC 45432385 + 45432365 45432405 41 GTTGCTTGGTCTGGATCTCACCGAGGTGATAATATCCCTAG GTTGCTTGGTCTGGATCTCACAGAGGTGATAATATCCCTAG < 41bp 0.495884693340569 0.746472321514766 0.92375255 0.94187 prediction 0.492944643029532 Functional Gain - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45432385 chr14:45432386 synonymous SNV . 0 22 hm5C_associated_SNPs_109279 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:45432353-45432390
64251 chr1 46739114 46739114 1 + A G LIHC 46739111 + 46739091 46739131 41 CTTCCCTCCTGGTTACAGCTCTAAGGCCCTGGAGCCCCAGC CTTCCCTCCTGGTTACAGCTCTAGGGCCCTGGAGCCCCAGC < 41bp 0.498592074005414 0.746462756516775 0.89042723 0.9210031 prediction 0.49292551303355 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46739111 chr1:46739114 nonsynonymous SNV 0.315 1 24 hm5C_associated_SNPs_109284 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr1:46739100-46739120
64251 chr19 40480461 40480461 1 + T C COAD 40480459 + 40480439 40480479 41 CCAGATGTGATGTACGCGGACATCGGAGGCATGGACATCCA CCAGATGTGATGTACGCGGACACCGGAGGCATGGACATCCA < 41bp 0.573621617870346 0.820079863981371 0.7317322 0.46300867 prediction 0.492916492222051 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480459 chr19:40480461 nonsynonymous SNV 0.071 5 23 hm5C_associated_SNPs_109285 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:40480443-40480464
64251 chr11 60618452 60618452 1 + C A rs138444219 60618448 + 60618428 60618468 41 TATTGAGTGCCTGTTGCATACAGGCACAATCCTAGGCACCG TATTGAGTGCCTGTTGCATACAGGAACAATCCTAGGCACCG < 41bp 0.62975644296055 0.876214476324477 0.13428172 0.31801426 prediction 0.492916066727854 Functional Gain - CCDC86;PTGDR2 ENSG00000256813 ncRNA_exonic Human antisense chr11:60618448 chr11:60618452 . . 0 25 hm5C_associated_SNPs_109286 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr11:60618432-60618471
64251 chr2 10443921 10443921 1 + C G rs191011119 10443920 + 10443900 10443940 41 AGCCCTGGCCTCCCCGCGACCCGCACTGCGACCTGGGCCAG AGCCCTGGCCTCCCCGCGACCGGCACTGCGACCTGGGCCAG < 41bp 0.589624433959872 0.836075557777139 0.13952813 0.85065436 prediction 0.492902247634534 Functional Gain - HPCAL1 ENSG00000115756 UTR5 Human protein_coding chr2:10443920 chr2:10443921 . . 0 22 hm5C_associated_SNPs_109288 0 0 3 CSTF2T POSTAR2 ENCODE chr2:10443872-10443921
64251 chr3 14176347 14176347 1 + C T rs182464375 14176346 + 14176326 14176366 41 CCTCATGTGGACATCATTCGCCGTGGAGACTTTTTCTACCA CCTCATGTGGACATCATTCGCTGTGGAGACTTTTTCTACCA < 41bp 0.504854823273543 0.751285070347408 0.31418818 0.11783844 prediction 0.492860494147729 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14176346 chr3:14176347 nonsynonymous SNV 0.938 2 22 hm5C_associated_SNPs_109296 1 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:14176316-14176352
64251 chrX 153008509 153008509 1 + C G SARC 153008508 + 153008488 153008528 41 AAGCAGAGAATCGGCATGGCCCGCATGTTCTACCACAGGTG AAGCAGAGAATCGGCATGGCCGGCATGTTCTACCACAGGTG < 41bp 0.433177701433486 0.746425254163265 0.14560583 0.27786532 prediction 0.49285050832653 Functional Gain - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153008508 chrX:153008509 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_109298 0 0 1 PPIG POSTAR2 ENCODE chrX:153008442-153008511
64251 chr7 155090115 155090115 1 + T G UCEC 155090112 + 155090092 155090132 41 AAGGTTGGGGAGATGATCAACGTTTCCGTGTCCGGGCCCTC AAGGTTGGGGAGATGATCAACGTGTCCGTGTCCGGGCCCTC < 41bp 0.354424546562574 0.746421189119566 0.26210538 0.3149855 prediction 0.492842378239132 Functional Gain - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090112 chr7:155090115 synonymous SNV . 0 24 hm5C_associated_SNPs_109300 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:155090040-155090120
64251 chr9 5772727 5772727 1 + C T SKCM 5772726 + 5772706 5772746 41 CAGTAAAGGGCCTCATAAATCCCAGGTCCAGCTTCGGTGAG CAGTAAAGGGCCTCATAAATCTCAGGTCCAGCTTCGGTGAG < 41bp 0.497377809989793 0.746420815706271 0.23040015 0.2562198 prediction 0.492841631412542 Functional Gain - RIC1 ENSG00000107036 CDS Human protein_coding chr9:5772726 chr9:5772727 synonymous SNV . 0 22 hm5C_associated_SNPs_109301 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:5772722-5772742
64251 chr9 130550648 130550648 1 + C T SKCM 130550647 + 130550627 130550667 41 GGTGACACTCTGGTACCGGCCCCCGGAGCTGTTGCTCGGTG GGTGACACTCTGGTACCGGCCTCCGGAGCTGTTGCTCGGTG < 41bp 0.489830029048432 0.746419821310889 0.12312943 0.23526919 prediction 0.492839642621778 Functional Gain - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550647 chr9:130550648 synonymous SNV . 0 22 hm5C_associated_SNPs_109303 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130550621-130550655
64251 chr4 83372355 83372355 1 + C T SKCM 83372354 + 83372334 83372374 41 GCACTCAAACAGCTGCAGGGCCACATGTGGAGGGCGGCATT GCACTCAAACAGCTGCAGGGCTACATGTGGAGGGCGGCATT < 41bp 0.534719290474225 0.781130592817286 0.115624815 0.13757837 prediction 0.492822604686121 Functional Gain - ENOPH1 ENSG00000145293 CDS Human protein_coding chr4:83372354 chr4:83372355 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109305 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:83372337-83372360
64251 chr2 99980853 99980853 1 + C A LUAD 99980852 + 99980832 99980872 41 GAGAGAAGCCAGAGCCAGAGCCGAAGCTACTCTTAAACTGC GAGAGAAGCCAGAGCCAGAGCAGAAGCTACTCTTAAACTGC < 41bp 0.507968577538541 0.754376173808621 0.42657822 0.85355973 prediction 0.492815192540159 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:99980852 chr2:99980853 synonymous SNV . 0 22 hm5C_associated_SNPs_109307 0 0 30 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:99980822-99980855
64251 chr15 44673018 44673018 1 + C T PCPG 44673017 + 44672997 44673037 41 GCCACAGATTCACACATAAACCACAATGGAAACCCCGGTAC GCCACAGATTCACACATAAACTACAATGGAAACCCCGGTAC < 41bp 0.508330701379439 0.75473507794973 0.034026086 0.31249273 prediction 0.492808753140582 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44673017 chr15:44673018 nonsynonymous SNV 0.803 2 22 hm5C_associated_SNPs_109308 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr15:44673000-44673020
64251 chr2 118583856 118583856 1 + T G STAD 118583854 + 118583834 118583874 41 CTCCACCAAAGGAATATATTCATCGTGTGGGTAGAACAGCC CTCCACCAAAGGAATATATTCAGCGTGTGGGTAGAACAGCC < 41bp 0.422291614787661 0.746400898668207 0.120233774 0.40043014 prediction 0.492801797336415 Functional Gain - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118583854 chr2:118583856 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_109310 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:118583840-118583860
64251 chr16 56717096 56717096 1 + C G rs146637306 56717095 + 56717075 56717115 41 AGTTGGCTCCTGTGCCTGTGCCGGCTCCTGCAAATGCAAAG AGTTGGCTCCTGTGCCTGTGCGGGCTCCTGCAAATGCAAAG < 41bp 0.431924570908645 0.746398030030514 0.104863435 0.22192621 prediction 0.492796060061028 Functional Gain - MT1X ENSG00000187193 CDS Human protein_coding chr16:56717095 chr16:56717096 synonymous SNV . 0 22 hm5C_associated_SNPs_109312 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:56717080-56717100
64251 chr5 53814866 53814866 1 + C T SKCM 53814865 + 53814845 53814885 41 GGCCTGATCTGGTGGATGAACCACATGGCCAGCCACCCAGT GGCCTGATCTGGTGGATGAACTACATGGCCAGCCACCCAGT < 41bp 0.518798875524402 0.765182567390345 0.16083363 0.8586933 prediction 0.492767383731887 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53814865 chr5:53814866 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_109317 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:53814826-53814882
64251 chr1 65898915 65898915 1 + C G rs373378880 65898914 + 65898894 65898934 41 TCTACGGCTCTGGCTTCTTCCCGAAGAGATATAGGAGCCAT TCTACGGCTCTGGCTTCTTCCGGAAGAGATATAGGAGCCAT < 41bp 0.452510261527437 0.746382424979237 0.4186791 0.88340425 prediction 0.492764849958474 Functional Gain - LEPROT ENSG00000213625 UTR3 Human protein_coding chr1:65898914 chr1:65898915 . . 0 22 hm5C_associated_SNPs_109319 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:65898869-65898919
64251 chr1 243652396 243652396 1 + T A LUAD 243652392 + 243652372 243652412 41 TCAGCAAGCAGAACCAGCTTCTCCTGGAGAGGCAGAGCCTG TCAGCAAGCAGAACCAGCTTCTCCAGGAGAGGCAGAGCCTG < 41bp 0.650193768658728 0.896561008305185 0.21374431 0.9396522 prediction 0.492734479292914 Functional Gain - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243652392 chr1:243652396 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_109323 0 0 1 AARS POSTAR2 ENCODE chr1:243652391-243652401
64251 chr3 10290992 10290992 1 + C G HNSC 10290988 + 10290968 10291008 41 GCCCTGTGATGTGGCCCCCTCCAGCCGGCCAGCTCAGAGGT GCCCTGTGATGTGGCCCCCTCCAGGCGGCCAGCTCAGAGGT < 41bp 0.457243969719295 0.746364731520929 0.8406409 0.9347219 prediction 0.492729463041859 Functional Gain - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10290988 chr3:10290992 nonsynonymous SNV 0.948 0 25 hm5C_associated_SNPs_109325 0 0 2 EIF3H POSTAR2 ENCODE chr3:10290960-10291008
64251 chr1 110883962 110883962 1 + T C UCEC 110883960 + 110883940 110883980 41 AGCCTAGGAAGCGAAGGCTGCCTGAGGAGAGTGGAGGACGT AGCCTAGGAAGCGAAGGCTGCCCGAGGAGAGTGGAGGACGT < 41bp 0.486301528051325 0.746354420912664 0.34578645 0.27947503 prediction 0.492708841825328 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883960 chr1:110883962 synonymous SNV . 0 23 hm5C_associated_SNPs_109326 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:110883948-110883989
64251 chr7 55433755 55433755 1 + C G rs375065869 55433754 + 55433734 55433774 41 TCAAAGAGGCTGAAGCTCCACCTGGGAGGGGAGGCAGAAAT TCAAAGAGGCTGAAGCTCCACGTGGGAGGGGAGGCAGAAAT < 41bp 0.434302581484287 0.746348106251574 0.056411356 0.13340026 prediction 0.492696212503148 Functional Gain - LANCL2 ENSG00000132434 CDS Human protein_coding chr7:55433754 chr7:55433755 nonsynonymous SNV 0.971 0 22 hm5C_associated_SNPs_109328 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr7:55433740-55433768
64251 chr1 121115958 121115958 1 + T A rs2289361 121115954 + 121115934 121115974 41 AAGCAGGAGGACCGGCAGACCCCATGCTCCCCTGACTCCAC AAGCAGGAGGACCGGCAGACCCCAAGCTCCCCTGACTCCAC < 41bp 0.438232896342403 0.746328602779255 0.7950704 0.586681 prediction 0.49265720555851 Functional Gain - SRGAP2B;SRGAP2C ENSG00000171943 ncRNA_exonic Human protein_coding chr1:121115954 chr1:121115958 . 0.992 0 25 hm5C_associated_SNPs_109332 0 0 1 UCHL5 POSTAR2 ENCODE chr1:121115897-121115993
64251 chr1 7887427 7887427 1 + C A rs561400159 7887423 + 7887403 7887443 41 ACCTCGTCCCAGCTTTTCCCCTCCCAGCCGCGACCTCACCC ACCTCGTCCCAGCTTTTCCCCTCCAAGCCGCGACCTCACCC < 41bp 0.314076904324644 0.746321952365473 0.379146 0.95438427 prediction 0.492643904730945 Functional Gain - PER3 ENSG00000049246 CDS Human protein_coding chr1:7887423 chr1:7887427 nonsynonymous SNV 0.009 1 25 hm5C_associated_SNPs_109336 0 0 1 SF3B1 POSTAR2 ENCODE chr1:7887384-7887427
64251 chr5 36166718 36166718 1 + C T LUAD 36166717 + 36166697 36166737 41 TCTCAAGGGGTGATTGCCTTCCGCTGCCCACGATCATTTAT TCTCAAGGGGTGATTGCCTTCTGCTGCCCACGATCATTTAT < 41bp 0.507910384490139 0.754230510045331 0.3772996 0.06458229 prediction 0.492640251110384 Functional Gain - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36166717 chr5:36166718 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_109337 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:36166694-36166729
64251 chr9 116045700 116045700 1 + C A SKCM 116045699 + 116045679 116045719 41 CGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGAC CGCTTGGAAGAGGCCCGACTCAATAAGGAGATTCCTGAGAC < 41bp 0.527723261452206 0.774031897032687 0.13798007 0.14396387 prediction 0.492617271160963 Functional Gain - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116045699 chr9:116045700 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_109340 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:116045686-116045712
64251 chr19 48284382 48284382 1 + C A COAD 48284381 + 48284361 48284401 41 TCAGTGCGGCGAGGGAACTCCCCAGGCCACCGGGTTCTTTG TCAGTGCGGCGAGGGAACTCCACAGGCCACCGGGTTCTTTG < 41bp 0.54825855322844 0.794551735345792 0.5493474 0.76126444 prediction 0.492586364234704 Functional Gain - SELENOW ENSG00000178980 CDS Human protein_coding chr19:48284381 chr19:48284382 synonymous SNV . 0 22 hm5C_associated_SNPs_109346 0 0 5 BUD13 POSTAR2 ENCODE chr19:48284369-48284389
64251 chr16 57785933 57785933 1 + A G UCEC 57785930 + 57785910 57785950 41 TCAACGTGGTCGAGTTTCACCCCAACGAGTACCTCCTGGCC TCAACGTGGTCGAGTTTCACCCCGACGAGTACCTCCTGGCC < 41bp 0.50269424827485 0.74897188266865 0.21934342 0.20658368 prediction 0.492555268787599 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57785930 chr16:57785933 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_109350 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:57785913-57785951
64251 chr19 57933141 57933141 1 + C G rs553826255 57933140 + 57933120 57933160 41 TCTGTATGAATTTTACTAGTCCGGGTACCTCATATAAGAAA TCTGTATGAATTTTACTAGTCGGGGTACCTCATATAAGAAA < 41bp 0.531557774911172 0.777826308689678 0.03274247 0.43175447 prediction 0.492537067557012 Functional Gain - ZNF17 ENSG00000186272 UTR3 Human protein_coding chr19:57933140 chr19:57933141 . . 0 22 hm5C_associated_SNPs_109351 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:57933095-57933150
64251 chr19 50158053 50158053 1 + C T SKCM 50158052 + 50158032 50158072 41 TGCGGTTCGACCCCCCCCACCCCCACCGGGCTGGCTGCCAC TGCGGTTCGACCCCCCCCACCTCCACCGGGCTGGCTGCCAC < 41bp 0.470336912298042 0.746259791712005 0.119826466 0.9466405 prediction 0.49251958342401 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50158052 chr19:50158053 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_109354 0 0 2 GRWD1 POSTAR2 ENCODE chr19:50158021-50158063
64251 chr12 56552197 56552197 1 + C A THCA 56552196 + 56552176 56552216 41 AGCAGTCAAGATGGTGGGGCCCAGGTCTTGGGAGACGGGCA AGCAGTCAAGATGGTGGGGCCAAGGTCTTGGGAGACGGGCA < 41bp 0.500500317153984 0.746756292432214 0.44908494 0.6999881 prediction 0.492511950556462 Functional Gain - MYL6 ENSG00000092841 CDS Human protein_coding chr12:56552196 chr12:56552197 synonymous SNV . 0 22 hm5C_associated_SNPs_109356 0 0 2 PRPF8 POSTAR2 ENCODE chr12:56552189-56552301
64251 chr7 36324333 36324333 1 + C G rs111320816 36324332 + 36324312 36324352 41 ATTCCTATGGGACGCGGCTGCCGGCATGGAGCTGAGAGACG ATTCCTATGGGACGCGGCTGCGGGCATGGAGCTGAGAGACG < 41bp 0.430987766401952 0.746252010822419 0.4047464 0.838205 prediction 0.492504021644839 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36324332 chr7:36324333 synonymous SNV . 0 22 hm5C_associated_SNPs_109357 0 0 3 GRWD1 POSTAR2 ENCODE chr7:36324306-36324390
64251 chr6 109764261 109764261 1 + C T UCEC 109764260 + 109764240 109764280 41 AAGCCATTTCCCTTTGGTGTCCGCATTGACTACGTGCTTTA AAGCCATTTCCCTTTGGTGTCTGCATTGACTACGTGCTTTA < 41bp 0.535675781548237 0.78192674733239 0.044049054 0.16281518 prediction 0.492501931568307 Functional Gain - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764260 chr6:109764261 nonsynonymous SNV 0.595 5 22 hm5C_associated_SNPs_109358 0 0 1 GRWD1 POSTAR2 ENCODE chr6:109764189-109764278
64251 chr1 13910417 13910417 1 + C G rs355025 13910416 + 13910396 13910436 41 TGCTCCCACCCCTCCGGCCCCCCCACCGTCGCGCTCCTCCA TGCTCCCACCCCTCCGGCCCCGCCACCGTCGCGCTCCTCCA < 41bp 0.59562906150962 0.841879251562192 0.2932117 0.80102265 prediction 0.492500380105143 Functional Gain - PDPN ENSG00000162493 CDS Human protein_coding chr1:13910416 chr1:13910417 synonymous SNV . 0 22 hm5C_associated_SNPs_109359 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:13910412-13910441
64251 chr2 220044462 220044462 1 + C T COAD 220044461 + 220044441 220044481 41 TCCTCTCTCTCTAGCATCATCCCCAGAGGAGCCACACTCTG TCCTCTCTCTCTAGCATCATCTCCAGAGGAGCCACACTCTG < 41bp 0.55397282177587 0.800217429221421 0.16444975 0.9563322 prediction 0.492489214891102 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044461 chr2:220044462 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_109361 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:220044454-220044481
64251 chr10 13213030 13213030 1 + C A GBM 13213029 + 13213009 13213049 41 TGACGCGGGAAAATGGCGAGCCCGACGCATTTGATGAGCTC TGACGCGGGAAAATGGCGAGCACGACGCATTTGATGAGCTC < 41bp 0.495696316073416 0.746241771032193 0.109535396 0.07155189 prediction 0.492483542064386 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13213029 chr10:13213030 nonsynonymous SNV 0.004 3 22 hm5C_associated_SNPs_109363 0 0 2 EFTUD2 POSTAR2 ENCODE chr10:13212998-13213064
64251 chr1 38484964 38484964 1 + C T BLCA 38484963 + 38484943 38484983 41 CAACTCACCTGCAAACAGCCCCGGAGCTAGTCGACAGAGTC CAACTCACCTGCAAACAGCCCTGGAGCTAGTCGACAGAGTC < 41bp 0.494673377170796 0.746211447679227 0.40934962 0.17928809 prediction 0.492422895358454 Functional Gain - UTP11 ENSG00000183520 CDS Human protein_coding chr1:38484963 chr1:38484964 nonsynonymous SNV 0.967 4 22 hm5C_associated_SNPs_109368 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:38484826-38484982
64251 chr8 87393069 87393069 1 + C T SKCM 87393068 + 87393048 87393088 41 AATCCAGTAGTTCTTCTAATCCAAAATGGGATGAACAGCTA AATCCAGTAGTTCTTCTAATCTAAAATGGGATGAACAGCTA < 41bp 0.498955969405579 0.74620361441742 0.09306109 0.050008535 prediction 0.49240722883484 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87393068 chr8:87393069 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109369 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:87393045-87393070
64251 chr11 117153170 117153170 1 + T C UCEC 117153168 + 117153148 117153188 41 ATCAAGACAGCACGTACCACCATGGCAGGCCTGACCATGGA ATCAAGACAGCACGTACCACCACGGCAGGCCTGACCATGGA < 41bp 0.569952617608814 0.81614326858026 0.1425553 0.1568979 prediction 0.492381301942892 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117153168 chr11:117153170 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_109372 0 0 1 DDX24 POSTAR2 ENCODE chr11:117153119-117153171
64251 chr3 142773807 142773807 1 + C T SKCM 142773806 + 142773786 142773826 41 AAGAGGCGACACAGTACATCCCCCAGCCCATCTCGCAGTAG AAGAGGCGACACAGTACATCCTCCAGCCCATCTCGCAGTAG < 41bp 0.526740055825799 0.77291306342852 0.037199557 0.8997886 prediction 0.492346015205442 Functional Gain - U2SURP ENSG00000163714 CDS Human protein_coding chr3:142773806 chr3:142773807 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_109375 0 0 6 GRWD1 POSTAR2 ENCODE chr3:142773783-142773906
64251 chr16 72094673 72094673 1 + T A UCEC 72094669 + 72094649 72094689 41 GTTCACGACCTGGAGGAGGACACCTGGTATGCGACTGGGAT GTTCACGACCTGGAGGAGGACACCAGGTATGCGACTGGGAT < 41bp 0.630975694447542 0.87714150242907 0.40299916 0.79080784 prediction 0.492331615963055 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094669 chr16:72094673 nonsynonymous SNV 0.098 4 25 hm5C_associated_SNPs_109377 0 0 5 LARP4 POSTAR2 ENCODE chr16:72094623-72094689
64251 chr8 27514324 27514324 1 + C A LAML 27514323 + 27514303 27514343 41 CAGAAAAGTGGACTCTCTCTCCGAAGACATCTCCTTGACCC CAGAAAAGTGGACTCTCTCTCAGAAGACATCTCCTTGACCC < 41bp 0.53977263518277 0.785937304273289 0.51681054 0.9024489 prediction 0.49232933818104 Functional Gain - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27514323 chr8:27514324 synonymous SNV . 0 22 hm5C_associated_SNPs_109378 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:27514298-27514325
64251 chr6 7417653 7417653 1 + C A rs149650192 7417649 + 7417629 7417669 41 GAAAAAAAGAAAGGAGAAGACAGCCAAGACGAAAAAAGGCA GAAAAAAAGAAAGGAGAAGACAGCAAAGACGAAAAAAGGCA < 41bp 0.347070700728213 0.746163555339852 0.16186753 0.12070006 prediction 0.492327110679703 Functional Gain - RIOK1 ENSG00000124784 CDS Human protein_coding chr6:7417649 chr6:7417653 synonymous SNV . 0 25 hm5C_associated_SNPs_109379 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:7417649-7417682
64251 chr17 80012510 80012510 1 + C T rs78902137 80012509 + 80012489 80012529 41 CTGGAGAAGCTGGACACAGACCTGAAGAACTACAAGGGCAA CTGGAGAAGCTGGACACAGACTTGAAGAACTACAAGGGCAA < 41bp 0.5316599288685 0.777809879980264 0.08421376 0.111929476 prediction 0.492299902223528 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80012509 chr17:80012510 synonymous SNV . 0 22 hm5C_associated_SNPs_109382 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:80012460-80012520
64251 chr4 83351759 83351759 1 + C G rs553856255 83351758 + 83351738 83351778 41 ACGTGGTCTCGGGCTCCTGCCCCGTCCTGCTCACGAGTTCA ACGTGGTCTCGGGCTCCTGCCGCGTCCTGCTCACGAGTTCA < 41bp 0.456899750902877 0.746149514337666 0.044800878 0.23945019 prediction 0.492299028675331 Functional Gain - ENOPH1 ENSG00000145293 UTR5 Human protein_coding chr4:83351758 chr4:83351759 . . 0 22 hm5C_associated_SNPs_109383 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr4:83351740-83351780
64251 chrX 48678642 48678642 1 + C T UCEC 48678641 + 48678621 48678661 41 CTGATGGGCCTTGCCAGTGGCCGCATTATCCTTATCCTAGA CTGATGGGCCTTGCCAGTGGCTGCATTATCCTTATCCTAGA < 41bp 0.504137196366764 0.75028516300723 0.029952705 0.08578542 prediction 0.492295933280932 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678641 chrX:48678642 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_109384 0 0 2 LSM11 POSTAR2 ENCODE chrX:48678638-48678663
64251 chrX 135592349 135592349 1 + C G SKCM 135592348 + 135592328 135592368 41 GGTGGCCGTCAAATCACTGCCCAGGCATGGGATGGGACTAC GGTGGCCGTCAAATCACTGCCGAGGCATGGGATGGGACTAC < 41bp 0.428539327248869 0.746138928265962 0.05065036 0.4189584 prediction 0.492277856531924 Functional Gain - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135592348 chrX:135592349 nonsynonymous SNV 0.987 0 22 hm5C_associated_SNPs_109388 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chrX:135592339-135592365
64251 chr8 11616939 11616939 1 + C G rs555781562 11616938 + 11616918 11616958 41 GGTCAGGGGGCAGGAGTGTCCCAAGGGCTGGCCCACCTGCT GGTCAGGGGGCAGGAGTGTCCGAAGGGCTGGCCCACCTGCT < 41bp 0.565721314074588 0.811841531580294 0.58597696 0.8592906 prediction 0.492240435011412 Functional Gain - GATA4 ENSG00000136574 UTR3 Human protein_coding chr8:11616938 chr8:11616939 . . 0 22 hm5C_associated_SNPs_109394 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr8:11616935-11616956
64251 chr16 20788730 20788730 1 + C G LUSC 20788729 + 20788709 20788749 41 CCAGGAACCACTCAGCTGACCCAGAAAGACATTCTCTACAG CCAGGAACCACTCAGCTGACCGAGAAAGACATTCTCTACAG < 41bp 0.599027047153764 0.845143211307573 0.375342 0.49842563 prediction 0.492232328307617 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20788729 chr16:20788730 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_109395 0 0 8 FXR1 POSTAR2 ENCODE chr16:20788695-20788778
64251 chr18 22008854 22008854 1 + C G BLCA 22008853 + 22008833 22008873 41 GTGATGCTGCCGAATGAATACCCAGGTACAGCTCCACCTAT GTGATGCTGCCGAATGAATACGCAGGTACAGCTCCACCTAT < 41bp 0.431373338097733 0.74610925081854 0.06325635 0.09707549 prediction 0.492218501637081 Functional Gain - IMPACT ENSG00000154059 CDS Human protein_coding chr18:22008853 chr18:22008854 nonsynonymous SNV 0.991 5 22 hm5C_associated_SNPs_109397 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:22008844-22008879
64251 chr14 72190413 72190413 1 + C A LUSC 72190412 + 72190392 72190432 41 CCAGTGGTTTTCACCAGTGCCCGGAGTTCACCTAAAGAAGA CCAGTGGTTTTCACCAGTGCCAGGAGTTCACCTAAAGAAGA < 41bp 0.506934843697137 0.753029103054825 0.5431082 0.8777058 prediction 0.492188518715375 Functional Gain - SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72190412 chr14:72190413 synonymous SNV . 0 22 hm5C_associated_SNPs_109399 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr14:72190398-72190416
64251 chr12 125591759 125591759 1 + T C STAD 125591757 + 125591737 125591777 41 CCCTTCAGCCACCCACTGTTCATCATGTTCTCATCGGGCAC CCCTTCAGCCACCCACTGTTCACCATGTTCTCATCGGGCAC < 41bp 0.580709909136783 0.826800209200826 0.24499914 0.19586906 prediction 0.492180600128086 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125591757 chr12:125591759 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_109400 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:125591751-125591789
64251 chr19 48220033 48220033 1 + T G STAD 48220031 + 48220011 48220051 41 CCGGCCCTGGAGGACGCAGACTTCGACGGCAAGCCCATGGT CCGGCCCTGGAGGACGCAGACTGCGACGGCAAGCCCATGGT < 41bp 0.397395720681412 0.746085476136194 0.16457215 0.12368831 prediction 0.492170952272387 Functional Gain - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48220031 chr19:48220033 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_109401 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:48220010-48220035
64251 chr8 48878875 48878875 1 + C T rs142732823 48878874 + 48878854 48878894 41 CGGGTGGAGATGGACCGCGGCCGCATTGCAGAGCCCAGTGT CGGGTGGAGATGGACCGCGGCTGCATTGCAGAGCCCAGTGT < 41bp 0.53852595207275 0.784602990424085 0.3246197 0.39272556 prediction 0.492154076702669 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878874 chr8:48878875 nonsynonymous SNV 0.031 4 22 hm5C_associated_SNPs_109402 1 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48878846-48878882
64251 chr16 88743023 88743023 1 + C G rs192882624 88743022 + 88743002 88743042 41 GATCTGCAGGCGGGGCTGCCCCGAGTGGGGCTCCCACTGCC GATCTGCAGGCGGGGCTGCCCGGAGTGGGGCTCCCACTGCC < 41bp 0.597350143822521 0.843400287604983 0.85738057 0.908865 prediction 0.492100287564923 Functional Gain - SNAI3-AS1 ENSG00000260630 ncRNA_intronic Human antisense chr16:88743022 chr16:88743023 . . 0 22 hm5C_associated_SNPs_109411 0 0 1 EIF3H POSTAR2 ENCODE chr16:88743008-88743067
64251 chr5 137515402 137515402 1 + C A GBM 137515398 + 137515378 137515418 41 AGGGATCCTTTCTCCGCCAGCGGGCTTGCTGTCCGATGACG AGGGATCCTTTCTCCGCCAGCGGGATTGCTGTCCGATGACG < 41bp 0.675647433396162 0.921695395335716 0.89298797 0.905913 prediction 0.492095923879109 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137515398 chr5:137515402 synonymous SNV . 0 25 hm5C_associated_SNPs_109412 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137515381-137515402
64251 chr10 94452272 94452272 1 + T A LUSC 94452268 + 94452248 94452288 41 TCTCTCCGCCCGAGAGGAAGCGTCTGGCCAAGATGCTGCAG TCTCTCCGCCCGAGAGGAAGCGTCAGGCCAAGATGCTGCAG < 41bp 0.633088981826553 0.87913053200378 0.1684857 0.25895026 prediction 0.492083100354453 Functional Gain - HHEX ENSG00000152804 CDS Human protein_coding chr10:94452268 chr10:94452272 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_109417 0 0 8 BUD13 POSTAR2 ENCODE chr10:94452229-94452383
64251 chr2 170684224 170684224 1 + C G rs2303555 170684220 + 170684200 170684240 41 CGAGCGGCCGCTGGCCGCGGCTGCCGGCGGCGAGGACGCGG CGAGCGGCCGCTGGCCGCGGCTGCGGGCGGCGAGGACGCGG < 41bp 0.534084144344786 0.780123847344327 0.43153405 0.60429204 prediction 0.492079405999081 Functional Gain - UBR3 ENSG00000144357 CDS Human protein_coding chr2:170684220 chr2:170684224 synonymous SNV . 0 25 hm5C_associated_SNPs_109418 0 0 2 GEMIN5 POSTAR2 ENCODE chr2:170684145-170684235
64251 chr7 148921517 148921517 1 + C A UCEC 148921513 + 148921493 148921533 41 GAACCACCAGCGGCTGCACACGGGCGAGCGGCCTTTCCAAT GAACCACCAGCGGCTGCACACGGGAGAGCGGCCTTTCCAAT < 41bp 0.674455717908942 0.920456596575747 0.8926871 0.9044461 prediction 0.49200175733361 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921513 chr7:148921517 synonymous SNV . 0 25 hm5C_associated_SNPs_109422 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:148921508-148921536
64251 chr2 233244940 233244940 1 + C A LUAD 233244939 + 233244919 233244959 41 GTACATGTTTCGCATGGGAACCCCAGACCCTGAGTACCCAG GTACATGTTTCGCATGGGAACACCAGACCCTGAGTACCCAG < 41bp 0.541014731000319 0.787012731115292 0.03132841 0.06556374 prediction 0.491996000229946 Functional Gain - ALPP ENSG00000163283 CDS Human protein_coding chr2:233244939 chr2:233244940 synonymous SNV . 0 22 hm5C_associated_SNPs_109423 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:233244919-233244940
64251 chr16 8738518 8738518 1 + T G OV 8738516 + 8738496 8738536 41 CTCGCAGATGGCAAGCTGCGCTTCGTGGTGGAGCCCGTGGA CTCGCAGATGGCAAGCTGCGCTGCGTGGTGGAGCCCGTGGA < 41bp 0.39909647686339 0.745982463382756 0.19635177 0.31237763 prediction 0.491964926765512 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738516 chr16:8738518 nonsynonymous SNV 0.587 1 23 hm5C_associated_SNPs_109427 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:8738507-8738532
64251 chr22 21802597 21802597 1 + C A rs78874131 21802596 + 21802576 21802616 41 GAGAGCTGACCACAGGGCCCCCCGGGGAACAGGGATGGCAC GAGAGCTGACCACAGGGCCCCACGGGGAACAGGGATGGCAC < 41bp 0.484979188383974 0.745969892545171 0.3819772 0.37956154 prediction 0.491939785090343 Functional Gain - HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21802596 chr22:21802597 . . 0 22 hm5C_associated_SNPs_109430 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:21802558-21802602
64251 chr20 39728804 39728804 1 + C T STAD 39728803 + 39728783 39728823 41 ATAGAGCCTCCTGGACTTTTCCGTGGCCGCGGCAACCACCC ATAGAGCCTCCTGGACTTTTCTGTGGCCGCGGCAACCACCC < 41bp 0.502629264970393 0.748592730099627 0.547262 0.29296988 prediction 0.491926930258468 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39728803 chr20:39728804 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_109431 0 0 17 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:39728720-39728820
64251 chr2 207174506 207174506 1 + T G BLCA 207174503 + 207174483 207174523 41 ATGGTTTTGAGATGAATTTTCAGTGTGCTCCCCCTCTTCCA ATGGTTTTGAGATGAATTTTCAGGGTGCTCCCCCTCTTCCA < 41bp 0.365324922603745 0.745934213395459 0.44517294 0.95598865 prediction 0.491868426790919 Functional Gain - ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207174503 chr2:207174506 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_109439 0 0 3 EWSR1 POSTAR2 SRX029344 chr2:207174496-207174527
64251 chr7 5643160 5643160 1 + T C COAD 5643158 + 5643138 5643178 41 GCTACTTTGACATCGAGTGGCGTGACCGGCGCATCACACTG GCTACTTTGACATCGAGTGGCGCGACCGGCGCATCACACTG < 41bp 0.568696659240557 0.814627857559474 0.46885842 0.35344315 prediction 0.491862396637833 Functional Gain - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5643158 chr7:5643160 synonymous SNV . 0 23 hm5C_associated_SNPs_109440 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:5643127-5643161
64251 chrX 24735711 24735711 1 + C A THCA 24735710 + 24735690 24735730 41 TCTGCAGAGGAAGTTTTCTCCCGGATGTCTCTTGTTGGGAC TCTGCAGAGGAAGTTTTCTCCAGGATGTCTCTTGTTGGGAC < 41bp 0.504760035018751 0.750684181312202 0.87621593 0.8153653 prediction 0.491848292586903 Functional Gain - POLA1 ENSG00000101868 CDS Human protein_coding chrX:24735710 chrX:24735711 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_109441 0 0 17 CSTF2 POSTAR2 GSE40859,GSM1003588 chrX:24735696-24735717
64251 chr8 2093181 2093181 1 + C A rs3407 2093177 + 2093157 2093197 41 GTGGGTTGGCAGACAACACACTAGCATTTTCACGGGTGTGG GTGGGTTGGCAGACAACACACTAGAATTTTCACGGGTGTGG < 41bp 0.389727022717118 0.745923957991684 0.15301943 0.22656286 prediction 0.491847915983368 Functional Gain - MYOM2 ENSG00000036448 UTR3 Human protein_coding chr8:2093177 chr8:2093181 . . 0 25 hm5C_associated_SNPs_109442 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:2093161-2093197
64251 chr1 200017678 200017678 1 + C A LUAD 200017677 + 200017657 200017697 41 CAGACCCCTATACCAGCTCACCCGAGTCCATAATGGGCTAT CAGACCCCTATACCAGCTCACACGAGTCCATAATGGGCTAT < 41bp 0.484844270292047 0.74590197417741 0.066642195 0.18751058 prediction 0.491803948354821 Functional Gain - NR5A2 ENSG00000116833 CDS Human protein_coding chr1:200017677 chr1:200017678 nonsynonymous SNV 0.774 3 22 hm5C_associated_SNPs_109447 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:200017669-200017696
64251 chr8 145135325 145135325 1 + C A STAD 145135324 + 145135304 145135344 41 GCTGGTGGCCCCCAGCTGGCCCTGGCCCTGCTGCCAGCCTC GCTGGTGGCCCCCAGCTGGCCATGGCCCTGCTGCCAGCCTC < 41bp 0.507271552668014 0.753163613066913 0.22510761 0.30437988 prediction 0.491784120797798 Functional Gain - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135324 chr8:145135325 nonsynonymous SNV 0.887 2 22 hm5C_associated_SNPs_109450 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:145135320-145135400
64251 chr7 99702683 99702683 1 + T C STAD 99702681 + 99702661 99702701 41 CCGACAGAGATGCGCATTGGCTTGACGGAAGAGTTTTGTGT CCGACAGAGATGCGCATTGGCTCGACGGAAGAGTTTTGTGT < 41bp 0.584211266964206 0.830088480160234 0.15774655 0.19699746 prediction 0.491754426392057 Functional Gain - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99702681 chr7:99702683 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_109452 0 0 2 DDX24 POSTAR2 ENCODE chr7:99702677-99702722
64251 chr8 128752793 128752793 1 + C T UCEC 128752792 + 128752772 128752812 41 CCTCAAGAGGTGCCACGTCTCCACACATCAGCACAACTACG CCTCAAGAGGTGCCACGTCTCTACACATCAGCACAACTACG < 41bp 0.523289017161999 0.769148294793326 0.08878407 0.4190161 prediction 0.491718555262653 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128752792 chr8:128752793 synonymous SNV . 0 22 hm5C_associated_SNPs_109456 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:128752780-128752800
64251 chr4 155487073 155487073 1 + C T LUAD 155487072 + 155487052 155487092 41 TGGCTATCGGGCTCGTCCAGCCAAAGCAGCTGCCACTCAAA TGGCTATCGGGCTCGTCCAGCTAAAGCAGCTGCCACTCAAA < 41bp 0.495171867796343 0.745850747880145 0.5899197 0.44137922 prediction 0.49170149576029 Functional Gain - FGB ENSG00000171564 CDS Human protein_coding chr4:155487072 chr4:155487073 synonymous SNV . 0 22 hm5C_associated_SNPs_109457 0 0 5 DHX30 POSTAR2 ENCODE chr4:155487056-155487087
64251 chr14 105878113 105878113 1 + C G rs186832203 105878109 + 105878089 105878129 41 CGCCTTCCAGGCCTTCCTGGCGCGCAGTGCGCCTTTCTGGC CGCCTTCCAGGCCTTCCTGGCGCGGAGTGCGCCTTTCTGGC < 41bp 0.468121364625032 0.745844827142947 0.106333405 0.88831323 prediction 0.491689654285893 Functional Gain - TEX22 ENSG00000226174 CDS Human protein_coding chr14:105878109 chr14:105878113 synonymous SNV . 0 25 hm5C_associated_SNPs_109459 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:105878103-105878137
64251 chr2 217525337 217525337 1 + T C UCEC 217525335 + 217525315 217525355 41 GAGAACCACGTGGACAGCACCATGAACATGTTGGGCGGGGG GAGAACCACGTGGACAGCACCACGAACATGTTGGGCGGGGG < 41bp 0.551735515673001 0.797569585866509 0.2725348 0.28645718 prediction 0.491668140387016 Functional Gain - IGFBP2 ENSG00000115457 CDS Human protein_coding chr2:217525335 chr2:217525337 nonsynonymous SNV 0.951 0 23 hm5C_associated_SNPs_109463 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:217525332-217525348
64251 chr17 8370302 8370302 1 + T C KIRP 8370300 + 8370280 8370320 41 CTCCTGGTCTGGGCTCCTCGCGTCCATCGTCAGCGCCGGGT CTCCTGGTCTGGGCTCCTCGCGCCCATCGTCAGCGCCGGGT < 41bp 0.519103697305413 0.764935921670757 0.38973242 0.07688874 prediction 0.491664448730688 Functional Gain - NDEL1 ENSG00000166579 CDS Human protein_coding chr17:8370300 chr17:8370302 synonymous SNV . 0 23 hm5C_associated_SNPs_109464 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:8370255-8370303
64251 chr8 37607351 37607351 1 + C A LIHC 37607350 + 37607330 37607370 41 CCCAACATACCAGAGGCAATCCGCAGAAACTACGAGTTGAT CCCAACATACCAGAGGCAATCAGCAGAAACTACGAGTTGAT < 41bp 0.544542207182336 0.790355944696902 0.17811957 0.65107423 prediction 0.491627475029133 Functional Gain - ERLIN2 ENSG00000147475 CDS Human protein_coding chr8:37607350 chr8:37607351 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_109469 0 0 2 PRPF8 POSTAR2 ENCODE chr8:37607348-37607413
64251 chr8 38884240 38884240 1 + T C CESC 38884238 + 38884218 38884258 41 CATTTGCTTCCATTGTTGCTCATGAATTGGGTCATAATCTT CATTTGCTTCCATTGTTGCTCACGAATTGGGTCATAATCTT < 41bp 0.454219134817774 0.745810365251788 0.188245 0.08774221 prediction 0.491620730503576 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38884238 chr8:38884240 synonymous SNV . 0 23 hm5C_associated_SNPs_109470 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr8:38884214-38884241
64251 chr12 13224300 13224300 1 + C G ESCA 13224299 + 13224279 13224319 41 GTCTGTCTTCCTCTTCTGGGCCGAAGGGCTGTCAGCTGCAT GTCTGTCTTCCTCTTCTGGGCGGAAGGGCTGTCAGCTGCAT < 41bp 0.42442558428594 0.745798119042317 0.16721481 0.3740837 prediction 0.491596238084634 Functional Gain - FAM234B ENSG00000084444 CDS Human protein_coding chr12:13224299 chr12:13224300 synonymous SNV . 0 22 hm5C_associated_SNPs_109471 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:13224285-13224313
64251 chr20 11900441 11900441 1 + C T UCEC 11900440 + 11900420 11900460 41 GCAGAGGACAAAGATGAAATCCGTATACCAGATGTCGAACC GCAGAGGACAAAGATGAAATCTGTATACCAGATGTCGAACC < 41bp 0.511067510953081 0.756863090779151 0.3532074 0.253129 prediction 0.491591159652141 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11900440 chr20:11900441 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_109473 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:11900390-11900445
64251 chr3 100455502 100455502 1 + C A rs140669729 100455498 + 100455478 100455518 41 CTCCTCAGCAGCTCACCCACCAGGCGTTCAGCCACAGCAGC CTCCTCAGCAGCTCACCCACCAGGAGTTCAGCCACAGCAGC < 41bp 0.680938149692937 0.926730123252018 0.89172685 0.8893323 prediction 0.491583947118162 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100455498 chr3:100455502 synonymous SNV . 0 25 hm5C_associated_SNPs_109475 1 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:100455453-100455546
64251 chr5 122940462 122940462 1 + C A LIHC 122940461 + 122940441 122940481 41 GTTAAACACAGATGACCCCACCGCAGGACGTTCAAATGCAC GTTAAACACAGATGACCCCACAGCAGGACGTTCAAATGCAC < 41bp 0.505741389384681 0.751531749156924 0.056879222 0.060409784 prediction 0.491580719544486 Functional Gain - CSNK1G3 ENSG00000151292 CDS Human protein_coding chr5:122940461 chr5:122940462 synonymous SNV . 0 22 hm5C_associated_SNPs_109476 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:122940433-122940471
64251 chrX 136649808 136649808 1 + C A BRCA 136649807 + 136649787 136649827 41 TACAAACTGGTCAACCACATCCGAGTGCACACGGGCGAGAA TACAAACTGGTCAACCACATCAGAGTGCACACGGGCGAGAA < 41bp 0.535173948594992 0.780962342702811 0.5276338 0.589502 prediction 0.491576788215638 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649807 chrX:136649808 synonymous SNV . 0 22 hm5C_associated_SNPs_109478 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:136649783-136649823
64251 chr1 100154844 100154844 1 + C T LUSC 100154843 + 100154823 100154863 41 CAGAAGAGAAGCTTCACACCCCGCAAAAAAGGCTAATGACT CAGAAGAGAAGCTTCACACCCTGCAAAAAAGGCTAATGACT < 41bp 0.515261492165456 0.761048994815694 0.08439791 0.084180236 prediction 0.491575005300476 Functional Gain - PALMD ENSG00000099260 CDS Human protein_coding chr1:100154843 chr1:100154844 nonsynonymous SNV 0.264 0 22 hm5C_associated_SNPs_109479 0 0 2 GRWD1 POSTAR2 ENCODE chr1:100154821-100154941
64251 chr6 80751871 80751871 1 + T C STAD 80751869 + 80751849 80751889 41 ACTATAGTGGTGGTGAAAGTCATAATTCTTCATCCTCCAAG ACTATAGTGGTGGTGAAAGTCACAATTCTTCATCCTCCAAG < 41bp 0.541807597932796 0.787590572449641 0.121753454 0.09074217 prediction 0.491565949033692 Functional Gain - TTK ENSG00000112742 CDS Human protein_coding chr6:80751869 chr6:80751871 synonymous SNV . 0 23 hm5C_associated_SNPs_109480 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chr6:80751860-80751880
64251 chr17 4795494 4795494 1 + C T rs201175554 4795493 + 4795473 4795513 41 TGCCCTTAACACCAGTGGGGCCGGAGGGTCCCGGCCAGCCC TGCCCTTAACACCAGTGGGGCTGGAGGGTCCCGGCCAGCCC < 41bp 0.519567845695095 0.765345998458495 0.66443646 0.4005066 prediction 0.491556305526799 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4795493 chr17:4795494 synonymous SNV . 0 22 hm5C_associated_SNPs_109483 0 0 2 GRWD1 POSTAR2 ENCODE chr17:4795486-4795500
64251 chr22 40800400 40800400 1 + C G rs143730708 40800399 + 40800379 40800419 41 AAGATTGCCGTCTCCCTACCCCGCTCTGAGAAGCTCCGCTC AAGATTGCCGTCTCCCTACCCGGCTCTGAGAAGCTCCGCTC < 41bp 0.430832573268457 0.745769382945703 0.13426039 0.6683225 prediction 0.491538765891406 Functional Gain - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40800399 chr22:40800400 nonsynonymous SNV 0.969 2 22 hm5C_associated_SNPs_109487 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr22:40800364-40800401
64251 chr16 2569925 2569925 1 + C G rs531952668 2569924 + 2569904 2569944 41 TTGCCCCCGCCCGCCCCGTGCCGTGGACATCTGGGCCCACT TTGCCCCCGCCCGCCCCGTGCGGTGGACATCTGGGCCCACT < 41bp 0.44586512569585 0.745753061908265 0.8470206 0.9053416 prediction 0.49150612381653 Functional Gain - ATP6V0C ENSG00000185883;ENSG00000260272 UTR3 Human other chr16:2569924 chr16:2569925 . . 0 22 hm5C_associated_SNPs_109493 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2569740-2570034
64251 chrX 54837340 54837340 1 + C T rs1043044 54837339 + 54837319 54837359 41 TGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCC TGGCCGAAGGGTCTCAAAGGCTCTAATGGCCTCAATGGCCC < 41bp 0.552371924632442 0.798118250760731 0.07818183 0.8968208 prediction 0.491492652256579 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837339 chrX:54837340 synonymous SNV . 0 22 hm5C_associated_SNPs_109494 0 0 1 ZNF622 POSTAR2 ENCODE chrX:54837264-54837343
64251 chr20 30946482 30946482 1 + C A rs570751501 30946478 + 30946458 30946498 41 CGCGCGCCGCCGCTGCCACGCGCCCCCCCCACCGCCGCCGC CGCGCGCCGCCGCTGCCACGCGCCACCCCCACCGCCGCCGC < 41bp 0.570864740409472 0.816588645868304 0.095615536 0.10404131 prediction 0.491447810917665 Functional Gain - ASXL1 ENSG00000171456 UTR5 Human protein_coding chr20:30946478 chr20:30946482 . . 0 25 hm5C_associated_SNPs_109498 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:30946421-30946501
64251 chr4 134084265 134084265 1 + C G rs151224823 134084261 + 134084241 134084281 41 TCGCAGCAATCTGCATGTTCCTGGCATGGACTCTGTTCCAG TCGCAGCAATCTGCATGTTCCTGGGATGGACTCTGTTCCAG < 41bp 0.580586277830387 0.826294100153087 0.4260507 0.8910743 prediction 0.491415644645399 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134084261 chr4:134084265 synonymous SNV . 0 25 hm5C_associated_SNPs_109503 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr4:134084265-134084266
64251 chr1 1458897 1458897 1 + C A UCEC 1458896 + 1458876 1458916 41 CTTCCCCTCCGGCAGGTCAGCCGGCGGCTCCTCAGTCGACC CTTCCCCTCCGGCAGGTCAGCAGGCGGCTCCTCAGTCGACC < 41bp 0.537112675799732 0.782819322263905 0.90714514 0.90934503 prediction 0.491413292928347 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1458896 chr1:1458897 synonymous SNV . 0 22 hm5C_associated_SNPs_109504 0 0 2 SF3B4 POSTAR2 ENCODE chr1:1458819-1458897
64251 chr2 3428411 3428411 1 + C T UCEC 3428410 + 3428390 3428430 41 ATCTTTATTACGAGTACTACCCGCACGTGTACCCTGGGCGC ATCTTTATTACGAGTACTACCTGCACGTGTACCCTGGGCGC < 41bp 0.524882199128223 0.770579307549082 0.09748459 0.2716333 prediction 0.491394216841717 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3428410 chr2:3428411 nonsynonymous SNV 0.938 4 22 hm5C_associated_SNPs_109509 0 0 3 PPIG POSTAR2 ENCODE chr2:3428388-3428436
64251 chr1 109321954 109321954 1 + C A LIHC 109321953 + 109321933 109321973 41 TAATTGATCGTGGCTTTGATCCTGTGTCCACTGTCCTGCAT TAATTGATCGTGGCTTTGATCATGTGTCCACTGTCCTGCAT < 41bp 0.502345007825076 0.748039903817076 0.27816546 0.37006932 prediction 0.491389791984001 Functional Gain - STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109321953 chr1:109321954 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109510 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:109321931-109321970
64251 chr15 85326903 85326903 1 + C T UCEC 85326902 + 85326882 85326922 41 CCCAAGTCACCAAAGAGTCCCCGGAGCCCTCTGGAGGCCAC CCCAAGTCACCAAAGAGTCCCTGGAGCCCTCTGGAGGCCAC < 41bp 0.518094623959469 0.7637801387288 0.5107904 0.62486863 prediction 0.491371029538662 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326902 chr15:85326903 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_109513 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:85326893-85326916
64251 chr6 88046794 88046794 1 + C A SKCM 88046793 + 88046773 88046813 41 AACATTCAAAAAGGAACCACCCAAAGAGAAAGAGTTTCAAA AACATTCAAAAAGGAACCACCAAAAGAGAAAGAGTTTCAAA < 41bp 0.517646975735969 0.763309092395681 0.08226028 0.3211578 prediction 0.491324233319426 Functional Gain - SMIM8 ENSG00000111850;ENSG00000226524 CDS Human other chr6:88046793 chr6:88046794 synonymous SNV . 0 22 hm5C_associated_SNPs_109515 0 0 1 GRWD1 POSTAR2 ENCODE chr6:88046743-88046880
64251 chr11 6978644 6978644 1 + T A rs144240336 6978640 + 6978620 6978660 41 GCCCTGCAGTGGAATGGCTCCTAATCAGGGTTTGTTCCCAC GCCCTGCAGTGGAATGGCTCCTAAACAGGGTTTGTTCCCAC < 41bp 0.446767656585593 0.745649673999661 0.09757581 0.38658535 prediction 0.491299347999322 Functional Gain - ZNF215 ENSG00000149054 UTR3 Human protein_coding chr11:6978640 chr11:6978644 . . 0 25 hm5C_associated_SNPs_109517 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:6978642-6978690
64251 chr20 2736418 2736418 1 + C T rs188421286 2736417 + 2736397 2736437 41 CTTCGCCCCCGTGCTGCGCCCCCCAAGCTCCCCACCCCAGG CTTCGCCCCCGTGCTGCGCCCTCCAAGCTCCCCACCCCAGG < 41bp 0.471571081705933 0.745645003411738 0.15702027 0.95568734 prediction 0.491290006823475 Functional Gain - EBF4 ENSG00000088881 CDS Human protein_coding chr20:2736417 chr20:2736418 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_109520 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:2736417-2736418
64251 chr14 55529570 55529570 1 + C T SKCM 55529569 + 55529549 55529589 41 ACCGGACCACCTCCAGGACCCCCAGCACCCTTTCCTCCTTC ACCGGACCACCTCCAGGACCCTCAGCACCCTTTCCTCCTTC < 41bp 0.496660845535793 0.745630277328052 0.027368754 0.10763988 prediction 0.491260554656104 Functional Gain - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529569 chr14:55529570 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_109521 0 0 16 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr14:55529500-55529620
64251 chr15 40756081 40756081 1 + C T STAD 40756080 + 40756060 40756100 41 GATGAGCCGGAGCCAGCCATCCGAAAGAGCTACCAGGCGGT GATGAGCCGGAGCCAGCCATCTGAAAGAGCTACCAGGCGGT < 41bp 0.530570447476502 0.776195332450468 0.4344024 0.31217867 prediction 0.491249769947932 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756080 chr15:40756081 stopgain 1.000 1 22 hm5C_associated_SNPs_109522 0 0 4 BUD13 POSTAR2 ENCODE chr15:40756033-40756105
64251 chr19 42409915 42409915 1 + C T HNSC 42409914 + 42409894 42409934 41 AGCACTTCCTCCCCTCAGCACCCGAGAACCCCTCCTCAGCA AGCACTTCCTCCCCTCAGCACTCGAGAACCCCTCCTCAGCA < 41bp 0.542747218978162 0.788369230775347 0.4349947 0.757859 prediction 0.491244023594369 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42409914 chr19:42409915 synonymous SNV . 0 22 hm5C_associated_SNPs_109523 0 0 3 DDX55 POSTAR2 ENCODE chr19:42409907-42409970
64251 chr16 30409596 30409596 1 + A G UCEC 30409593 + 30409573 30409613 41 AGAGTGCGGCAAAGGTTTCGCGGACAGCTCCGCCCGAGTCA AGAGTGCGGCAAAGGTTTCGCGGGCAGCTCCGCCCGAGTCA < 41bp 0.533093540365251 0.778714983585884 0.15690178 0.4921618 prediction 0.491242886441265 Functional Gain - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409593 chr16:30409596 nonsynonymous SNV 0.980 3 24 hm5C_associated_SNPs_109524 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:30409580-30409600
64251 chr9 17330767 17330767 1 + C T LUSC 17330766 + 17330746 17330786 41 ATCTGCCAACAAGGGTTTCTCCCGAAAGAGCATCATGACAA ATCTGCCAACAAGGGTTTCTCTCGAAAGAGCATCATGACAA < 41bp 0.510681904142479 0.756295404354565 0.14737162 0.8987669 prediction 0.491227000424171 Functional Gain - CNTLN ENSG00000044459 CDS Human protein_coding chr9:17330766 chr9:17330767 synonymous SNV . 0 22 hm5C_associated_SNPs_109529 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:17330755-17330789
64251 chr12 104682683 104682683 1 + C A UCEC 104682679 + 104682659 104682699 41 AGCGGGGGAGAAGCACCTTACACGCTCCGCTCTGCTTTTGT AGCGGGGGAGAAGCACCTTACACGATCCGCTCTGCTTTTGT < 41bp 0.370204769379891 0.745588736801178 0.22411674 0.34867597 prediction 0.491177473602357 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104682679 chr12:104682683 synonymous SNV . 0 25 hm5C_associated_SNPs_109535 0 0 1 SF3B4 POSTAR2 ENCODE chr12:104682644-104682700
64251 chr11 76506924 76506924 1 + C A rs148143515 76506920 + 76506900 76506940 41 GCCGGGCTACACGACGTTGGCTGGCCTGGATCTCAGCCACA GCCGGGCTACACGACGTTGGCTGGACTGGATCTCAGCCACA < 41bp 0.678083209804976 0.92364975131073 0.67843306 0.7744689 prediction 0.491133083011507 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76506920 chr11:76506924 synonymous SNV . 0 25 hm5C_associated_SNPs_109537 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr11:76506919-76506945
64251 chr12 58140851 58140851 1 + T C SKCM 58140849 + 58140829 58140869 41 AGATGTGTGGAGAAAAGTTTCTTAAGCATTCAGACGAAGCC AGATGTGTGGAGAAAAGTTTCTCAAGCATTCAGACGAAGCC < 41bp 0.587821978194078 0.833387303480041 0.09374973 0.06632963 prediction 0.491130650571925 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58140849 chr12:58140851 synonymous SNV . 0 23 hm5C_associated_SNPs_109539 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:58140850-58140851
64251 chr1 154960953 154960953 1 + C T UCEC 154960952 + 154960932 154960972 41 AGATTCCCTCTGGTCTCCGTCCGAAACGTCTACCTCTTCCC AGATTCCCTCTGGTCTCCGTCTGAAACGTCTACCTCTTCCC < 41bp 0.53808954455059 0.783648713888955 0.054416418 0.06201142 prediction 0.49111833867673 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960952 chr1:154960953 stopgain 0.987 0 22 hm5C_associated_SNPs_109542 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:154960921-154960953
64251 chr16 14983027 14983027 1 + C A COAD 14983026 + 14983006 14983046 41 CTTGCCTCAAGTTTCTTTCACCGCAGTGGGCTACCATAAAC CTTGCCTCAAGTTTCTTTCACAGCAGTGGGCTACCATAAAC < 41bp 0.515568794708624 0.761122066657217 0.17194134 0.28296316 prediction 0.491106543897186 Functional Gain - NOMO1 ENSG00000103512 CDS Human protein_coding chr16:14983026 chr16:14983027 synonymous SNV . 0 22 hm5C_associated_SNPs_109544 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:14982490-14983397
64251 chr15 58001493 58001493 1 + T C COAD 58001491 + 58001471 58001511 41 ACTGAGAAGAAACCTCATTACATGGAAGTGCTAGAAATGCG ACTGAGAAGAAACCTCATTACACGGAAGTGCTAGAAATGCG < 41bp 0.496957114309187 0.745532375050387 0.23941022 0.17868337 prediction 0.491064750100773 Functional Gain - GCOM1;POLR2M ENSG00000137878;ENSG00000255529 CDS Human other chr15:58001491 chr15:58001493 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_109547 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:58001467-58001501
64251 chr11 209947 209947 1 + C A UCS 209946 + 209926 209966 41 ACTGAGCGGGCCATGGAGATCCTCAAAGTGCTCTTCAACAT ACTGAGCGGGCCATGGAGATCATCAAAGTGCTCTTCAACAT < 41bp 0.512696081541222 0.758221355618676 0.13697481 0.105982244 prediction 0.49105054815491 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209946 chr11:209947 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109549 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:209923-209949
64251 chr21 40871822 40871822 1 + C A SKCM 40871821 + 40871801 40871841 41 GTGAAGATGTGGGCAACCTCCCTGAAGCCCAGGAGAAGAAT GTGAAGATGTGGGCAACCTCCATGAAGCCCAGGAGAAGAAT < 41bp 0.482903536319533 0.745523483974719 0.07074258 0.13364643 prediction 0.491046967949439 Functional Gain - SH3BGR;WRB-SH3BGR ENSG00000185437 CDS Human protein_coding chr21:40871821 chr21:40871822 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_109551 0 0 3 TRA2A POSTAR2 ENCODE chr21:40871789-40871841
64251 chr16 53860348 53860348 1 + T C rs146138389 53860346 + 53860326 53860366 41 AAATGGCAGTGAGCTGGCATCATGATGAAAATCTGGTGGAC AAATGGCAGTGAGCTGGCATCACGATGAAAATCTGGTGGAC < 41bp 0.556631680407281 0.802136282760736 0.5086631 0.73951876 prediction 0.49100920470691 Functional Gain - FTO ENSG00000140718 CDS Human protein_coding chr16:53860346 chr16:53860348 synonymous SNV . 0 23 hm5C_associated_SNPs_109554 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:53860313-53860352
64251 chr5 34950955 34950955 1 + C G rs143253289 34950954 + 34950934 34950974 41 TGGACTAGGAGGAGGTCTCACCCAAGGGAGGTAGCCAGTCC TGGACTAGGAGGAGGTCTCACGCAAGGGAGGTAGCCAGTCC < 41bp 0.45945697473308 0.745504440010023 0.1699095 0.39143723 prediction 0.491008880020045 Functional Gain - DNAJC21 ENSG00000168724 intronic Human protein_coding chr5:34950954 chr5:34950955 . . 0 22 hm5C_associated_SNPs_109555 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:34950920-34950958
64251 chr10 135279752 135279752 1 + C G rs7894325 135279748 + 135279728 135279768 41 TCCTTTCTCAGAGCCTGGCCCAGGCCCCCCACTGCCTGCAG TCCTTTCTCAGAGCCTGGCCCAGGGCCCCCACTGCCTGCAG < 41bp 0.442596598673161 0.74550229791451 0.860073 0.9364861 prediction 0.49100459582902 Functional Gain - SCART1 ENSG00000214279 ncRNA_exonic Human protein_coding chr10:135279748 chr10:135279752 . . 0 25 hm5C_associated_SNPs_109557 0 0 2 HNRNPC POSTAR2 SRX1438577 chr10:135279741-135279779
64251 chr1 229438699 229438699 1 + C T HNSC 229438698 + 229438678 229438718 41 CACCGCGGCGCGCACAGGCCCCGAACGCTCAGGAGTGTGGT CACCGCGGCGCGCACAGGCCCTGAACGCTCAGGAGTGTGGT < 41bp 0.522327143114709 0.767822529505654 0.089491576 0.124795824 prediction 0.49099077278189 Functional Gain - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229438698 chr1:229438699 nonsynonymous SNV 0.187 1 22 hm5C_associated_SNPs_109561 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:229438623-229438725
64251 chr1 36769465 36769465 1 + T C OV 36769463 + 36769443 36769483 41 GCCGGGGCCGAGGAGCCTTTCCTCGGGGTCGGGGCCGGTTC GCCGGGGCCGAGGAGCCTTTCCCCGGGGTCGGGGCCGGTTC < 41bp 0.546637842156748 0.792123892805352 0.18037102 0.17088768 prediction 0.49097210129721 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36769463 chr1:36769465 synonymous SNV . 0 23 hm5C_associated_SNPs_109563 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:36769457-36769485
64251 chr3 120315375 120315375 1 + C G BLCA 120315371 + 120315351 120315391 41 CTTCAGTACAACGATCCCAACCGCCGAGGGCTCATCGTGAG CTTCAGTACAACGATCCCAACCGCGGAGGGCTCATCGTGAG < 41bp 0.573149558496707 0.818632798285387 0.07890922 0.14762774 prediction 0.49096647957736 Functional Gain - NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315371 chr3:120315375 nonsynonymous SNV 0.051 0 25 hm5C_associated_SNPs_109566 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:120315356-120315387
64251 chr6 160221773 160221773 1 + C G SKCM 160221769 + 160221749 160221789 41 GGAGTGCTGGCGATGTTCTGCACCCGAGGACTGCTATTTTT GGAGTGCTGGCGATGTTCTGCACCGGAGGACTGCTATTTTT < 41bp 0.446783646909347 0.745476715105073 0.069155425 0.15322074 prediction 0.490953430210147 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160221769 chr6:160221773 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_109567 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:160221741-160221783
64251 chr4 187130329 187130329 1 + C T UCEC 187130328 + 187130308 187130348 41 TCCGAGATACTTCCCCAACCCCGAGGAGTTCCAGCCTGAGC TCCGAGATACTTCCCCAACCCTGAGGAGTTCCAGCCTGAGC < 41bp 0.508443284947059 0.75389727399134 0.019858241 0.019753128 prediction 0.490907978088563 Functional Gain - CYP4V2 ENSG00000145476;ENSG00000164344 CDS Human other chr4:187130328 chr4:187130329 synonymous SNV . 0 22 hm5C_associated_SNPs_109573 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:187130324-187130362
64251 chr2 217084090 217084090 1 + T A rs547874753 217084086 + 217084066 217084106 41 GGGATTGAACTAGACACAGACACATGAGCAGGACTTTGGGG GGGATTGAACTAGACACAGACACAAGAGCAGGACTTTGGGG < 41bp 0.550134932617129 0.795583321637803 0.07963455 0.14370742 prediction 0.490896778041348 Functional Gain - LINC01963 ENSG00000260804 ncRNA_exonic Human lincRNA chr2:217084086 chr2:217084090 . . 0 25 hm5C_associated_SNPs_109576 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:217084080-217084100
64251 chr2 242157692 242157692 1 + C A rs199499943 242157688 + 242157668 242157708 41 CTTCTCGTCCGACTTCCTGCCGCGCGCCTACTACCGGTGGA CTTCTCGTCCGACTTCCTGCCGCGAGCCTACTACCGGTGGA < 41bp 0.677488714955387 0.922922783440533 0.5876017 0.858636 prediction 0.490868136970293 Functional Gain - ANO7 ENSG00000146205 CDS Human protein_coding chr2:242157688 chr2:242157692 synonymous SNV . 0 25 hm5C_associated_SNPs_109580 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585674 chr2:242157667-242157703
64251 chr11 70049728 70049728 1 + C A CESC 70049724 + 70049704 70049744 41 TCCATGCTGCTGGAGCAGAACGACCTGGAGCCCGGGCACAC TCCATGCTGCTGGAGCAGAACGACATGGAGCCCGGGCACAC < 41bp 0.676914985131962 0.922340042765582 0.23626265 0.1900503 prediction 0.49085011526724 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70049724 chr11:70049728 nonsynonymous SNV 0.966 4 25 hm5C_associated_SNPs_109582 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70049708-70049736
64251 chr13 113817331 113817331 1 + C G rs372086805 113817330 + 113817310 113817350 41 CCTCCTCCTGCAGGCGGCTCCCCGTGCATCTCCCAGCCCTG CCTCCTCCTGCAGGCGGCTCCGCGTGCATCTCCCAGCCCTG < 41bp 0.61998309382763 0.865403204137916 0.81643784 0.91925395 prediction 0.490840220620571 Functional Gain - PROZ ENSG00000126231 CDS Human protein_coding chr13:113817330 chr13:113817331 nonsynonymous SNV 0.760 1 22 hm5C_associated_SNPs_109583 0 0 2 DDX59 POSTAR2 ENCODE chr13:113817250-113817358
64251 chr16 2015002 2015002 1 + C G rs61749488 2014998 + 2014978 2015018 41 TGCCCGTCCGGCCCCAGCCGCGGCCCGGGAATCTACGTCAC TGCCCGTCCGGCCCCAGCCGCGGCGCGGGAATCTACGTCAC < 41bp 0.564238939881755 0.809658313541809 0.42610282 0.81632674 prediction 0.490838747320109 Functional Gain - SNHG9 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2014998 chr16:2015002 . . 0 25 hm5C_associated_SNPs_109584 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:2014988-2015021
64251 chr22 21799356 21799356 1 + C A UCEC 21799355 + 21799335 21799375 41 ATGGTGGAGAACTCCATCTTCCGGGCCCACAAGAACGTCCT ATGGTGGAGAACTCCATCTTCAGGGCCCACAAGAACGTCCT < 41bp 0.494167507028007 0.745400087040486 0.91243833 0.92718637 prediction 0.490800174080973 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799355 chr22:21799356 synonymous SNV . 0 22 hm5C_associated_SNPs_109585 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr22:21799334-21799362
64251 chr11 67160217 67160217 1 + T G LUSC 67160214 + 67160194 67160234 41 CAGCAATACCAGGCAGCCACCCCTGGTCAGGACCTGCTGCG CAGCAATACCAGGCAGCCACCCCGGGTCAGGACCTGCTGCG < 41bp 0.346622337898733 0.745390894308665 0.10218197 0.7785392 prediction 0.490781788617331 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67160214 chr11:67160217 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_109589 0 0 6 DDX24 POSTAR2 ENCODE chr11:67160168-67160240
64251 chr19 54653316 54653316 1 + C T SKCM 54653315 + 54653295 54653335 41 GAAGGAACCCAGTGCGGCAGCCCCAACGGGGGCTGGGGGCG GAAGGAACCCAGTGCGGCAGCTCCAACGGGGGCTGGGGGCG < 41bp 0.551692863399899 0.797065580676379 0.21893069 0.935643 prediction 0.49074543455296 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54653315 chr19:54653316 synonymous SNV . 0 22 hm5C_associated_SNPs_109592 0 0 6 PTBP1 POSTAR2 GSE57278,GSM1486177 chr19:54653316-54653317
64251 chr11 70279272 70279272 1 + C G rs73518300 70279271 + 70279251 70279291 41 GAGTGGGACGGAGCCGGAGCCCGTGTACAGCATGGAGGCCG GAGTGGGACGGAGCCGGAGCCGGTGTACAGCATGGAGGCCG < 41bp 0.429852451060762 0.745356223621354 0.47057736 0.88533545 prediction 0.490712447242707 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279271 chr11:70279272 synonymous SNV . 0 22 hm5C_associated_SNPs_109595 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:70279237-70279273
64251 chr5 141304203 141304203 1 + C A LIHC 141304202 + 141304182 141304222 41 TGACTCCTAAGTCCACCAGCCCAGATGGGCCTCAGACTACC TGACTCCTAAGTCCACCAGCCAAGATGGGCCTCAGACTACC < 41bp 0.548196358070838 0.793552347670033 0.3201558 0.38243732 prediction 0.490711979198391 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141304202 chr5:141304203 nonsynonymous SNV 0.566 0 22 hm5C_associated_SNPs_109596 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:141304188-141304219
64251 chr7 65557600 65557600 1 + C G OV 65557599 + 65557579 65557619 41 AGCTGTGTTCATGGCCGAGACCAAGGGGGTCGCCCTCAACC AGCTGTGTTCATGGCCGAGACGAAGGGGGTCGCCCTCAACC < 41bp 0.423812234733716 0.745355297344857 0.6870496 0.7391459 prediction 0.490710594689713 Functional Gain - ASL ENSG00000126522;ENSG00000249319 CDS Human other chr7:65557599 chr7:65557600 synonymous SNV . 0 22 hm5C_associated_SNPs_109597 0 0 4 DDX24 POSTAR2 ENCODE chr7:65557598-65557635
64251 chr19 39871751 39871751 1 + C T UCEC 39871750 + 39871730 39871770 41 AGGCCATTCTCATGTTCCCTCCAGGTGAGGTGCCCCACCCT AGGCCATTCTCATGTTCCCTCTAGGTGAGGTGCCCCACCCT < 41bp 0.499879957157241 0.745353801373637 0.9335889 0.59619343 prediction 0.490707602747274 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39871750 chr19:39871751 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_109598 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:39871722-39871753
64251 chr3 42226283 42226283 1 + T C UCEC 42226281 + 42226261 42226301 41 CTGGAGGAGCAGGTGGAACACATCAGGGAGGAGGTAAGACA CTGGAGGAGCAGGTGGAACACACCAGGGAGGAGGTAAGACA < 41bp 0.573566339201486 0.818919018797408 0.8661664 0.8770004 prediction 0.490705359191844 Functional Gain - TRAK1 ENSG00000182606 CDS Human protein_coding chr3:42226281 chr3:42226283 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_109599 0 0 14 BUD13 POSTAR2 ENCODE chr3:42226169-42226348
64251 chr14 23944951 23944951 1 + T G rs111774192 23944949 + 23944929 23944969 41 TTTCAGGTGAGAATGACCCACTTCGTTTTAAGCCTCATCCC TTTCAGGTGAGAATGACCCACTGCGTTTTAAGCCTCATCCC < 41bp 0.411464855286113 0.745348854032872 0.028235078 0.08638212 prediction 0.490697708065745 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23944949 chr14:23944951 synonymous SNV . 0 23 hm5C_associated_SNPs_109601 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr14:23944940-23944960
64251 chr4 151504531 151504531 1 + T C UCEC 151504529 + 151504509 151504549 41 ATGTCTCTCTGGGTCGAGTTCATCACGGCGTCGGGCTATCT ATGTCTCTCTGGGTCGAGTTCACCACGGCGTCGGGCTATCT < 41bp 0.548945312925685 0.79428343871141 0.38839728 0.670506 prediction 0.49067625157145 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504529 chr4:151504531 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_109604 0 0 8 EIF3D POSTAR2 GSE65004,GSM1585672 chr4:151504506-151504551
64251 chr17 19552136 19552136 1 + C G rs557068998 19552135 + 19552115 19552155 41 TCGCGGCTGAGCGAGCGAGCCCTGGGCGAGTGAATTGTGGC TCGCGGCTGAGCGAGCGAGCCGTGGGCGAGTGAATTGTGGC < 41bp 0.458113525681813 0.7453339620512 0.27834404 0.804734 prediction 0.490667924102401 Functional Gain - ALDH3A2 ENSG00000072210 UTR5 Human protein_coding chr17:19552135 chr17:19552136 . . 0 22 hm5C_associated_SNPs_109605 1 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:19552129-19552164
64251 chr15 81293928 81293928 1 + C G rs28387047 81293927 + 81293907 81293947 41 CACCCTCTGCCCCGCTGCCGCCGGCGCCGCTTCCCAAGAGC CACCCTCTGCCCCGCTGCCGCGGGCGCCGCTTCCCAAGAGC < 41bp 0.558559197737912 0.803879656158825 0.65980065 0.92181253 prediction 0.490640916841825 Functional Gain - TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81293927 chr15:81293928 . . 0 22 hm5C_associated_SNPs_109610 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:81293927-81293957
64251 chr17 15620490 15620490 1 + T C UCEC 15620488 + 15620468 15620508 41 ATTCATCAGCTCTCATTCAACATCAGAGAACTCATACCGGA ATTCATCAGCTCTCATTCAACACCAGAGAACTCATACCGGA < 41bp 0.466054811936634 0.745320055648012 0.12115762 0.09218952 prediction 0.490640111296024 Functional Gain - ZNF286A ENSG00000187607;ENSG00000255104 CDS Human other chr17:15620488 chr17:15620490 synonymous SNV . 0 23 hm5C_associated_SNPs_109612 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:15620476-15620493
64251 chr5 56509990 56509990 1 + T C STAD 56509988 + 56509968 56510008 41 ATGACTTTGCTCCAGCCTGGCTTAATTTCCCTACTCCACCA ATGACTTTGCTCCAGCCTGGCTCAATTTCCCTACTCCACCA < 41bp 0.45741587055692 0.74531684886312 0.03176713 0.039856553 prediction 0.490633697726239 Functional Gain - GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56509988 chr5:56509990 synonymous SNV . 0 23 hm5C_associated_SNPs_109614 0 0 40 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:56509916-56509999
64251 chr1 110033910 110033910 1 + C T SKCM 110033909 + 110033889 110033929 41 TTCTCGAAAGCGGAAGTTATCCCCTGGCCCTACCACTCTTA TTCTCGAAAGCGGAAGTTATCTCCTGGCCCTACCACTCTTA < 41bp 0.486614421582999 0.74531165262637 0.21149981 0.37021446 prediction 0.49062330525274 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110033909 chr1:110033910 synonymous SNV 0.998 0 22 hm5C_associated_SNPs_109616 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110033900-110033933
64251 chr8 142441034 142441034 1 + C A LIHC 142441033 + 142441013 142441053 41 TCCCCTCTTCCCAGGAAGCGCCGCGGAGCCATCAACAGCAA TCCCCTCTTCCCAGGAAGCGCAGCGGAGCCATCAACAGCAA < 41bp 0.487124563067176 0.74529524662042 0.38372496 0.530715 prediction 0.49059049324084 Functional Gain - PTP4A3 ENSG00000184489 CDS Human protein_coding chr8:142441033 chr8:142441034 nonsynonymous SNV 0.176 1 22 hm5C_associated_SNPs_109619 0 0 6 BUD13 POSTAR2 ENCODE chr8:142440967-142441069
64251 chr11 59828682 59828682 1 + C A LUAD 59828681 + 59828661 59828701 41 GAGCTGGGGTCAGCCTCTGCCCATGGTACCCCAGGCAGTGA GAGCTGGGGTCAGCCTCTGCCAATGGTACCCCAGGCAGTGA < 41bp 0.513811098528258 0.759105733151259 0.24666125 0.2742321 prediction 0.490589269246003 Functional Gain - MS4A3 ENSG00000149516 CDS Human protein_coding chr11:59828681 chr11:59828682 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_109620 0 0 3 DDX3X POSTAR2 ENCODE chr11:59828654-59828694
64251 chr19 17416723 17416723 1 + C A UCEC 17416722 + 17416702 17416742 41 ATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGAGTAG ATGGCTGTCTTGGCTGGATCCATGTTGGGCCCCACGAGTAG < 41bp 0.498951741313612 0.745266364335519 0.028067559 0.22981104 prediction 0.490532728671038 Functional Gain - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17416722 chr19:17416723 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_109625 0 0 14 TARDBP POSTAR2 DRA001158,DRS012386 chr19:17416699-17416725
64251 chrX 103041539 103041539 1 + C T SKCM 103041538 + 103041518 103041558 41 ACCACCATCTGCGGCAAGGGCCTGAGCGCAACGGTAACAGG ACCACCATCTGCGGCAAGGGCTTGAGCGCAACGGTAACAGG < 41bp 0.529917202780927 0.775167540077322 0.08159447 0.047324687 prediction 0.490500674592791 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103041538 chrX:103041539 synonymous SNV . 0 22 hm5C_associated_SNPs_109629 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:103041520-103041560
64251 chr3 14508094 14508094 1 + C T SKCM 14508093 + 14508073 14508113 41 TGGTCCGAGGGCTGACGCTGCCGGGCGCGGGCGCAGGCATC TGGTCCGAGGGCTGACGCTGCTGGGCGCGGGCGCAGGCATC < 41bp 0.499528704685819 0.745226321925108 0.76536083 0.6177913 prediction 0.490452643850217 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14508093 chr3:14508094 nonsynonymous SNV 0.386 3 22 hm5C_associated_SNPs_109633 0 0 6 DDX24 POSTAR2 ENCODE chr3:14508047-14508118
64251 chrX 129543251 129543251 1 + T C UCEC 129543249 + 129543229 129543269 41 AGATATGGGGAGATTGTTAACATTAATCTCGTGCGGGACAA AGATATGGGGAGATTGTTAACACTAATCTCGTGCGGGACAA < 41bp 0.46988084485503 0.745219270875076 0.19876876 0.16271675 prediction 0.490438541750153 Functional Gain - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129543249 chrX:129543251 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_109635 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:129543221-129543258
64251 chr4 1742708 1742708 1 + C T COAD 1742707 + 1742687 1742727 41 AAAGAGGTGATCGAGGGCTACCGCAAGGTATGTCTCCGCCA AAAGAGGTGATCGAGGGCTACTGCAAGGTATGTCTCCGCCA < 41bp 0.527314054753737 0.772518937430979 0.29472792 0.5031411 prediction 0.490409765354485 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1742707 chr4:1742708 nonsynonymous SNV 0.204 2 22 hm5C_associated_SNPs_109638 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr4:1742676-1742708
64251 chr19 4428843 4428843 1 + C T BRCA 4428842 + 4428822 4428862 41 AGGCCGGCAGCCCCTGAGGTCCGGACCCACGCACGTTTCCA AGGCCGGCAGCCCCTGAGGTCTGGACCCACGCACGTTTCCA < 41bp 0.511721605652858 0.75692041290004 0.2219364 0.11724505 prediction 0.490397614494364 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4428842 chr19:4428843 synonymous SNV . 0 22 hm5C_associated_SNPs_109639 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:4428829-4428872
64251 chr7 75511505 75511505 1 + C T LUAD 75511504 + 75511484 75511524 41 GGGTGCCTCGTGGCTCATTCCCCAGACCTCTTTCCTCAGTA GGGTGCCTCGTGGCTCATTCCTCAGACCTCTTTCCTCAGTA < 41bp 0.52497343394158 0.770162795929677 0.06491053 0.1428423 prediction 0.490378723976192 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75511504 chr7:75511505 synonymous SNV . 0 22 hm5C_associated_SNPs_109641 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:75511481-75511522
64251 chr15 90814499 90814499 1 + C A SKCM 90814498 + 90814478 90814518 41 GATGTCAGCACTGATGTGATCCGAAGAGTTTTAAAAAGCAA GATGTCAGCACTGATGTGATCAGAAGAGTTTTAAAAAGCAA < 41bp 0.504611705293839 0.749790336546788 0.24463946 0.8212702 prediction 0.490357262505897 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814498 chr15:90814499 synonymous SNV . 0 22 hm5C_associated_SNPs_109642 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:90814424-90814515
64251 chr19 46173932 46173932 1 + C A LUAD 46173928 + 46173908 46173948 41 CAGACGGCGGGGGAGCTGTACCAGCGCTGGGAACGGTACCG CAGACGGCGGGGGAGCTGTACCAGAGCTGGGAACGGTACCG < 41bp 0.336767672116087 0.745168610884893 0.6135409 0.76240224 prediction 0.490337221769787 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46173928 chr19:46173932 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_109645 0 0 8 DDX24 POSTAR2 ENCODE chr19:46173882-46173964
64251 chr10 121658137 121658137 1 + C G HNSC 121658133 + 121658113 121658153 41 TCCCCAAGCCCCTGACTGCTCTCCCTTTTACAACTGGATCC TCCCCAAGCCCCTGACTGCTCTCCGTTTTACAACTGGATCC < 41bp 0.458810546187827 0.745166439537294 0.06803861 0.04678282 prediction 0.490332879074587 Functional Gain - SEC23IP ENSG00000107651 CDS Human protein_coding chr10:121658133 chr10:121658137 nonsynonymous SNV 0.671 2 25 hm5C_associated_SNPs_109646 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:121658085-121658148
64251 chr7 6193464 6193464 1 + T G rs61732616 6193462 + 6193442 6193482 41 GGCAGCCCCGCCGCCGAATCCCTGGAGGAGCCAGATGCGGC GGCAGCCCCGCCGCCGAATCCCGGGAGGAGCCAGATGCGGC < 41bp 0.393991348973215 0.745152252484552 0.41738546 0.91602147 prediction 0.490304504969104 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193462 chr7:6193464 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_109650 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:6193432-6193465
64251 chr11 60688429 60688429 1 + C T ESCA 60688428 + 60688408 60688448 41 CTTTGCTCTGTCTGGGATCGCCGCACAGCTGCTGAATGCCT CTTTGCTCTGTCTGGGATCGCTGCACAGCTGCTGAATGCCT < 41bp 0.5156058384803 0.760742730414049 0.4468096 0.13276392 prediction 0.490273783867499 Functional Gain - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60688428 chr11:60688429 synonymous SNV . 0 22 hm5C_associated_SNPs_109652 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:60688409-60688441
64251 chr5 179251050 179251050 1 + A G BRCA 179251047 + 179251027 179251067 41 GGGCTTGCACCGGGGGCACACCAAGCTCGCATTCCCCAGCC GGGCTTGCACCGGGGGCACACCAGGCTCGCATTCCCCAGCC < 41bp 0.521155922109182 0.766292192410804 0.93094754 0.9450236 prediction 0.490272540603244 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179251047 chr5:179251050 nonsynonymous SNV 0.044 2 24 hm5C_associated_SNPs_109654 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:179251023-179251051
64251 chrX 152612510 152612510 1 + C T SKCM 152612509 + 152612489 152612529 41 CTTGTCCAGCACCAGAGAGTCCACAGTGAGGAGAAGGGCTG CTTGTCCAGCACCAGAGAGTCTACAGTGAGGAGAAGGGCTG < 41bp 0.500666727150918 0.745796222828251 0.2054807 0.8451142 prediction 0.490258991354664 Functional Gain - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152612509 chrX:152612510 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_109656 0 0 4 EIF3H POSTAR2 ENCODE chrX:152612469-152612592
64251 chr14 93118383 93118383 1 + C T HNSC 93118382 + 93118362 93118402 41 CACCCCATGCCCCAGGTCCCCCAGACCATCCGAACCAGCCG CACCCCATGCCCCAGGTCCCCTAGACCATCCGAACCAGCCG < 41bp 0.504506912450174 0.749634714413548 0.06923962 0.07469812 prediction 0.490255603926748 Functional Gain - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93118382 chr14:93118383 nonsynonymous SNV 0.382 2 22 hm5C_associated_SNPs_109657 0 0 5 DDX59 POSTAR2 ENCODE chr14:93118296-93118439
64251 chrX 70522298 70522298 1 + C A BLCA 70522297 + 70522277 70522317 41 CACACTGTGCTGAGAAGCTTCCTGAGGCCCCTCAACCTGAA CACACTGTGCTGAGAAGCTTCATGAGGCCCCTCAACCTGAA < 41bp 0.485015935309369 0.745126099235852 0.23122957 0.3102103 prediction 0.490252198471704 Functional Gain - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70522297 chrX:70522298 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_109659 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350200 chrX:70522235-70522309
64251 chr22 45939340 45939340 1 + C A CESC 45939336 + 45939316 45939356 41 TGTGGCCACAAGTGCGAGAACACGCTGGGCTCCTACCTCTG TGTGGCCACAAGTGCGAGAACACGATGGGCTCCTACCTCTG < 41bp 0.688700355503097 0.93382088649977 0.5437091 0.80741286 prediction 0.490241061993344 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45939336 chr22:45939340 nonsynonymous SNV 0.964 2 25 hm5C_associated_SNPs_109660 0 0 4 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr22:45939333-45939356
64251 chr3 52842192 52842192 1 + C T LUAD 52842191 + 52842171 52842211 41 CAGGCTCTGACCCCACAAAGCCAGATGCCACATTGGTGGTG CAGGCTCTGACCCCACAAAGCTAGATGCCACATTGGTGGTG < 41bp 0.525793493134062 0.770913787172584 0.29002264 0.1701735 prediction 0.490240588077043 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52842191 chr3:52842192 nonsynonymous SNV 0.993 0 22 hm5C_associated_SNPs_109661 0 0 5 DDX55 POSTAR2 ENCODE chr3:52842133-52842222
64251 chr12 120118809 120118809 1 + T A rs111470062 120118805 + 120118785 120118825 41 AAGGCCATTTTTTAAGTCACCACGTCTAGAAGTCACATGAA AAGGCCATTTTTTAAGTCACCACGACTAGAAGTCACATGAA < 41bp 0.603722957353155 0.848830034313894 0.23386315 0.07414886 prediction 0.490214153921477 Functional Gain - PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120118805 chr12:120118809 . . 0 25 hm5C_associated_SNPs_109662 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:120118789-120118837
64251 chr11 61508748 61508748 1 + C T SKCM 61508747 + 61508727 61508767 41 ATCTTCCAGCAGCAGCCACTCCCCACGGGGCCGCCCATGCC ATCTTCCAGCAGCAGCCACTCTCCACGGGGCCGCCCATGCC < 41bp 0.583361753737487 0.828462654878899 0.19718865 0.95236826 prediction 0.490201802282823 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61508747 chr11:61508748 nonsynonymous SNV 0.473 1 22 hm5C_associated_SNPs_109665 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61508729-61508753
64251 chr12 8249496 8249496 1 + T A rs183305324 8249492 + 8249472 8249512 41 TTAATTTCTTGCAGCTCCATCTGGTTGCTGCATTTGAAGCA TTAATTTCTTGCAGCTCCATCTGGATGCTGCATTTGAAGCA < 41bp 0.436668382880046 0.745085273746367 0.07110679 0.32826442 prediction 0.490170547492735 Functional Gain - NECAP1 ENSG00000089818 UTR3 Human protein_coding chr12:8249492 chr12:8249496 . . 0 25 hm5C_associated_SNPs_109671 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:8249461-8249515
64251 chr10 70742410 70742410 1 + C G rs545140041 70742406 + 70742386 70742426 41 TTCAGGGGACAGCGGGAAGGCAGTCGAGGCTTCAGGGGACA TTCAGGGGACAGCGGGAAGGCAGTGGAGGCTTCAGGGGACA < 41bp 0.468404921204664 0.745083926159258 0.43572712 0.8031561 prediction 0.490167852318516 Functional Gain - DDX21 ENSG00000165732 CDS Human protein_coding chr10:70742406 chr10:70742410 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_109672 0 0 17 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:70742338-70742510
64251 chr1 178427117 178427117 1 + C T SKCM 178427116 + 178427096 178427136 41 TGCGGGAAACCCAGAGCACTCCCCAAAGTGCACCCCAAGTG TGCGGGAAACCCAGAGCACTCTCCAAAGTGCACCCCAAGTG < 41bp 0.56379919963435 0.808876805345031 0.10721049 0.9533298 prediction 0.490155211421362 Functional Gain - RASAL2 ENSG00000075391 CDS Human protein_coding chr1:178427116 chr1:178427117 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_109675 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:178427092-178427130
64251 chr7 143088088 143088088 1 + C G rs369391172 143088084 + 143088064 143088104 41 CGCGCCCTCGGCCGGCCCCCCGAGCAGCCTTTGTACTCTGC CGCGCCCTCGGCCGGCCCCCCGAGGAGCCTTTGTACTCTGC < 41bp 0.556318943928341 0.801391444277186 0.31346035 0.5314439 prediction 0.49014500069769 Functional Gain - ZYX ENSG00000159840 UTR3 Human protein_coding chr7:143088084 chr7:143088088 . . 0 25 hm5C_associated_SNPs_109676 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:143087932-143088131
64251 chrX 142967601 142967601 1 + C A HNSC 142967597 + 142967577 142967617 41 TGTAGTGGAGCAGTGGAAGACCAACGAAGCCCAAGCCATTG TGTAGTGGAGCAGTGGAAGACCAAAGAAGCCCAAGCCATTG < 41bp 0.356612416291005 0.745069152891268 0.30354026 0.5248744 prediction 0.490138305782536 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967597 chrX:142967601 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_109678 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:142967600-142967620
64251 chr19 34297899 34297899 1 + C T UCEC 34297898 + 34297878 34297918 41 GGACGTCCAAGCTGCTGCTTCCGGATGACTTTAAGGTAAGT GGACGTCCAAGCTGCTGCTTCTGGATGACTTTAAGGTAAGT < 41bp 0.483792326381866 0.745044641285938 0.6539248 0.3719674 prediction 0.490089282571875 Functional Gain - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34297898 chr19:34297899 nonsynonymous SNV 0.835 4 22 hm5C_associated_SNPs_109686 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34297850-34297907
64251 chr3 133494394 133494394 1 + C T UCEC 133494393 + 133494373 133494413 41 ACTGCCACCTGGCCAGAGCCCCGAATCACGCTGTGGTCACA ACTGCCACCTGGCCAGAGCCCTGAATCACGCTGTGGTCACA < 41bp 0.54031236804255 0.785356560042644 0.3854819 0.33910772 prediction 0.490088384000188 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133494393 chr3:133494394 nonsynonymous SNV 0.818 4 22 hm5C_associated_SNPs_109687 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr3:133494380-133494400
64251 chr1 173702952 173702952 1 + C T COAD 173702951 + 173702931 173702971 41 GAAGGGGTTCCCCAACCTGCCCGCATGCCCTATATCTCAGA GAAGGGGTTCCCCAACCTGCCTGCATGCCCTATATCTCAGA < 41bp 0.492500092719479 0.745039565686636 0.010068297 0.11924115 prediction 0.490079131373272 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173702951 chr1:173702952 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_109689 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:173702929-173702965
64251 chr10 70932366 70932366 1 + T G rs550048289 70932364 + 70932344 70932384 41 ATAAAATGGTCAGGAACCAACTTTACTGGCAAAAGGGTCCA ATAAAATGGTCAGGAACCAACTGTACTGGCAAAAGGGTCCA < 41bp 0.554189807219621 0.799218294980591 0.15616232 0.28303665 prediction 0.490056975521941 Functional Gain - VPS26A ENSG00000122958 UTR3 Human protein_coding chr10:70932364 chr10:70932366 . . 0 23 hm5C_associated_SNPs_109692 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70932303-70932410
64251 chr17 46128984 46128984 1 + C T STAD 46128983 + 46128963 46129003 41 CCCAGTCAGTGGAGACTTAACCAAAGAGGTTAGTGGACCTG CCCAGTCAGTGGAGACTTAACTAAAGAGGTTAGTGGACCTG < 41bp 0.504942565915387 0.749967708121454 0.30368716 0.45807406 prediction 0.490050284412134 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128983 chr17:46128984 synonymous SNV . 0 22 hm5C_associated_SNPs_109694 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:46128955-46128985
64251 chrX 51637798 51637798 1 + C T COAD 51637797 + 51637777 51637817 41 ACCCTCCCTCTTTCTGCATTCCCCACTCTGTGCGACCCCCC ACCCTCCCTCTTTCTGCATTCTCCACTCTGTGCGACCCCCC < 41bp 0.523949008101298 0.768964983143218 0.06894624 0.8708457 prediction 0.49003195008384 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637797 chrX:51637798 nonsynonymous SNV 0.785 1 22 hm5C_associated_SNPs_109696 0 0 2 PCBP2 POSTAR2 ENCODE chrX:51637758-51637840
64251 chr5 67522769 67522769 1 + C T SKCM 67522768 + 67522748 67522788 41 TCTCGCCTCCCACACCAAAGCCCCGGCCACCTCGGCCTCTT TCTCGCCTCCCACACCAAAGCTCCGGCCACCTCGGCCTCTT < 41bp 0.485312739852139 0.74500185655276 0.18889529 0.1009199 prediction 0.49000371310552 Functional Gain - PIK3R1 ENSG00000145675 CDS Human protein_coding chr5:67522768 chr5:67522769 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_109702 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr5:67522767-67522792
64251 chr19 14557241 14557241 1 + C T MESO 14557240 + 14557220 14557260 41 GACTGTCTCTGCCTCCAGGACCGGAAGCTGCTGCTGACAGC GACTGTCTCTGCCTCCAGGACTGGAAGCTGCTGCTGACAGC < 41bp 0.503346986406226 0.748347476044411 0.4015062 0.17312679 prediction 0.490000979276371 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14557240 chr19:14557241 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_109703 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:14557235-14557277
64251 chr1 52874248 52874248 1 + C T UCEC 52874247 + 52874227 52874267 41 CATCTGTCTCTCAGGTATGTCCGCATGCTGGGGGCACTTTA CATCTGTCTCTCAGGTATGTCTGCATGCTGGGGGCACTTTA < 41bp 0.514823164592685 0.75980329616448 0.74537957 0.89966863 prediction 0.489960263143589 Functional Gain - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52874247 chr1:52874248 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_109710 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:52874242-52874268
64251 chr8 28575489 28575489 1 + C A PAAD 28575485 + 28575465 28575505 41 TGGGCTCAGGGACTGGCTTTCGGCCTATTGGTGGTGGAGCT TGGGCTCAGGGACTGGCTTTCGGCATATTGGTGGTGGAGCT < 41bp 0.343367623956154 0.744971228032908 0.910036 0.9108515 prediction 0.489942456065816 Functional Gain - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28575485 chr8:28575489 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_109713 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:28575455-28575505
64251 chr19 41765617 41765617 1 + T C rs116041107 41765615 + 41765595 41765635 41 TGGATGAGGGTGGAGGTTATCCTGAACCCCCTGGAGCTGCA TGGATGAGGGTGGAGGTTATCCCGAACCCCCTGGAGCTGCA < 41bp 0.57102587423635 0.815984871322905 0.2753619 0.5372759 prediction 0.489917994173111 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41765615 chr19:41765617 synonymous SNV . 0 23 hm5C_associated_SNPs_109716 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409655 chr19:41765580-41765620
64251 chr3 38043904 38043904 1 + T C rs9843296 38043902 + 38043882 38043922 41 TATAGGAGAGAGCTGGGCACCATGGAAAGGGGCAGTCAGCA TATAGGAGAGAGCTGGGCACCACGGAAAGGGGCAGTCAGCA < 41bp 0.487862002640659 0.744937772370893 0.13397458 0.19306049 prediction 0.489875544741785 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38043902 chr3:38043904 synonymous SNV . 0 23 hm5C_associated_SNPs_109722 0 0 2 DDX24 POSTAR2 ENCODE chr3:38043885-38043917
64251 chr12 122498318 122498318 1 + C A rs541306226 122498314 + 122498294 122498334 41 CGAGGAATTGGAAAGATTTGCACACCCTCCAGAAAGGAGAG CGAGGAATTGGAAAGATTTGCACAACCTCCAGAAAGGAGAG < 41bp 0.346546750721916 0.744935073095798 0.023442239 0.06794596 prediction 0.489870146191597 Functional Gain - BCL7A ENSG00000110987 UTR3 Human protein_coding chr12:122498314 chr12:122498318 . . 0 25 hm5C_associated_SNPs_109725 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:122498283-122498322
64251 chr3 133475800 133475800 1 + C T COAD 133475799 + 133475779 133475819 41 CCTTCTCATACCGTCGTGGCCCGAAGTATGGGCGGCAAGGA CCTTCTCATACCGTCGTGGCCTGAAGTATGGGCGGCAAGGA < 41bp 0.527360645900119 0.772294975939266 0.2378751 0.2546357 prediction 0.489868660078294 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133475799 chr3:133475800 stopgain 0.883 1 22 hm5C_associated_SNPs_109726 0 0 4 RPS3 POSTAR2 ENCODE chr3:133475751-133475803
64251 chr1 156169888 156169888 1 + C A COAD 156169884 + 156169864 156169904 41 GGGTTCCTGGTCAATACCTTCACCCTCATCTCTGGCCAGTG GGGTTCCTGGTCAATACCTTCACCATCATCTCTGGCCAGTG < 41bp 0.316014072863425 0.74490097857074 0.13397837 0.11260992 prediction 0.48980195714148 Functional Gain - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156169884 chr1:156169888 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_109729 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr1:156169860-156169893
64251 chr10 114173028 114173028 1 + C T SKCM 114173027 + 114173007 114173047 41 CTTTGAAGCCCACATTGTTTCCCGCGGTGCCTCGACTCCTT CTTTGAAGCCCACATTGTTTCTCGCGGTGCCTCGACTCCTT < 41bp 0.48398029136892 0.744888568826524 0.48691726 0.33514223 prediction 0.489777137653049 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114173027 chr10:114173028 nonsynonymous SNV 0.428 3 22 hm5C_associated_SNPs_109735 0 0 2 PPIG POSTAR2 ENCODE chr10:114173013-114173065
64251 chr20 61869950 61869950 1 + C G HNSC 61869946 + 61869926 61869966 41 GTGGGAAGAACCGGAAGACGCAGCCCCTGTGGCCCCCTCCG GTGGGAAGAACCGGAAGACGCAGCGCCTGTGGCCCCCTCCG < 41bp 0.613373147778711 0.858252361804759 0.8323225 0.89597 prediction 0.489758428052097 Functional Gain - BIRC7 ENSG00000101197 CDS Human protein_coding chr20:61869946 chr20:61869950 synonymous SNV . 0 25 hm5C_associated_SNPs_109739 0 0 1 PPIG POSTAR2 ENCODE chr20:61869923-61869961
64251 chr3 101280764 101280764 1 + C G rs2303475 101280763 + 101280743 101280783 41 GTGCTAGCTTCGGCGCGGATCCCTGGGCGTCCGTACGTCGG GTGCTAGCTTCGGCGCGGATCGCTGGGCGTCCGTACGTCGG < 41bp 0.47196361548659 0.744873534128979 0.22212303 0.25085974 prediction 0.489747068257959 Functional Gain - TRMT10C ENSG00000174173 UTR5 Human protein_coding chr3:101280763 chr3:101280764 . . 0 22 hm5C_associated_SNPs_109741 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr3:101280722-101280779
64251 chr1 181058891 181058891 1 + C T rs3747951 181058890 + 181058870 181058910 41 TCGGGACTCCTACGGAAAAGCCCCGGGGGCGGCAGAGAGGA TCGGGACTCCTACGGAAAAGCTCCGGGGGCGGCAGAGAGGA < 41bp 0.507203850865847 0.752063718734095 0.50033945 0.5992496 prediction 0.489719735736497 Functional Gain - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058890 chr1:181058891 nonsynonymous SNV 0.987 2 22 hm5C_associated_SNPs_109745 0 0 6 DGCR8 POSTAR2 ENCODE chr1:181058868-181058922
64251 chr15 80869292 80869292 1 + C A ACC 80869291 + 80869271 80869311 41 CCCATTTCCCTCTGGACACTCCGGGAAGGCCTTCAGGTATG CCCATTTCCCTCTGGACACTCAGGGAAGGCCTTCAGGTATG < 41bp 0.557325975152496 0.802179690519701 0.89620054 0.92694634 prediction 0.489707430734408 Functional Gain - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80869291 chr15:80869292 synonymous SNV . 0 22 hm5C_associated_SNPs_109748 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:80869282-80869323
64251 chr17 45286872 45286872 1 + C A UCEC 45286871 + 45286851 45286891 41 AGCCCCTGCACCAGCCCCTGCCCCAGCTCCTGAGGCTCCCA AGCCCCTGCACCAGCCCCTGCACCAGCTCCTGAGGCTCCCA < 41bp 0.486171902630605 0.74484632850166 0.19832462 0.22204468 prediction 0.48969265700332 Functional Gain - MYL4 ENSG00000198336 CDS Human protein_coding chr17:45286871 chr17:45286872 synonymous SNV . 0 22 hm5C_associated_SNPs_109750 0 0 1 DDX55 POSTAR2 ENCODE chr17:45286777-45286885
64251 chr3 128976653 128976653 1 + T C OV 128976651 + 128976631 128976671 41 GTGTATGAAGCCGCCTCGGCCATCGTCAATCTGCCAGGCTG GTGTATGAAGCCGCCTCGGCCACCGTCAATCTGCCAGGCTG < 41bp 0.562357606791321 0.807203542109027 0.3243931 0.4150783 prediction 0.489691870635413 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128976651 chr3:128976653 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_109752 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:128976643-128976663
64251 chr1 15987995 15987995 1 + T C HNSC 15987993 + 15987973 15988013 41 AAACCAGAGAAAATGTCTGTCCTGATGCTTCGAGGCCATTA AAACCAGAGAAAATGTCTGTCCCGATGCTTCGAGGCCATTA < 41bp 0.532744497882241 0.777584155450258 0.17073447 0.11162722 prediction 0.489679315136036 Functional Gain - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15987993 chr1:15987995 synonymous SNV . 0 23 hm5C_associated_SNPs_109755 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:15987973-15988029
64251 chr16 27374684 27374684 1 + C T LUAD 27374683 + 27374663 27374703 41 AGTCCGCAGAGCTCACATCTCCCAAGCAGCTCCCCAGAGCA AGTCCGCAGAGCTCACATCTCTCAAGCAGCTCCCCAGAGCA < 41bp 0.532334647647339 0.777172160312893 0.20365724 0.354474 prediction 0.489675025331108 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374683 chr16:27374684 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_109756 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:27374664-27374688
64251 chr8 42024725 42024725 1 + C A UCEC 42024724 + 42024704 42024744 41 GTCAAACATAACATCAGTTTCCGGGACAGTAGTTCCCTTGG GTCAAACATAACATCAGTTTCAGGGACAGTAGTTCCCTTGG < 41bp 0.50781105453734 0.752647386748435 0.90678406 0.9208585 prediction 0.489672664422191 Functional Gain - AP3M2 ENSG00000070718 CDS Human protein_coding chr8:42024724 chr8:42024725 synonymous SNV . 0 22 hm5C_associated_SNPs_109757 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:42024704-42024726
64251 chr10 76735651 76735651 1 + C T SKCM 76735650 + 76735630 76735670 41 CGGCCACTTCTTCTCCCTCTCCCCAGAGTTCTTCCAGCCAG CGGCCACTTCTTCTCCCTCTCTCCAGAGTTCTTCCAGCCAG < 41bp 0.571896668383723 0.816731662207328 0.12076378 0.949752 prediction 0.489669987647208 Functional Gain - KAT6B ENSG00000156650 CDS Human protein_coding chr10:76735650 chr10:76735651 nonsynonymous SNV 0.984 2 22 hm5C_associated_SNPs_109758 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:76735632-76735655
64251 chr2 74782445 74782445 1 + C A UCEC 74782441 + 74782421 74782461 41 GGCTGAGTGTGTGAGTGTGGCCCCCGTCACCGTGGAGACCC GGCTGAGTGTGTGAGTGTGGCCCCAGTCACCGTGGAGACCC < 41bp 0.342828382411731 0.744821857361804 0.0690158 0.13457236 prediction 0.489643714723609 Functional Gain - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74782441 chr2:74782445 synonymous SNV . 0 25 hm5C_associated_SNPs_109760 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:74782423-74782446
64251 chr17 28706548 28706548 1 + C T LUSC 28706547 + 28706527 28706567 41 TACCTGCTGCCCAGCCTCAACCCCGATGGCTTCGAGCGTGC TACCTGCTGCCCAGCCTCAACTCCGATGGCTTCGAGCGTGC < 41bp 0.500917894013096 0.745739374653547 0.3883711 0.57959133 prediction 0.489642961280902 Functional Gain - CPD ENSG00000108582 CDS Human protein_coding chr17:28706547 chr17:28706548 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_109761 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:28706527-28706549
64251 chr8 145662239 145662239 1 - T C HNSC 145662242 - 145662222 145662262 41 GACCCAGGTGGCCAGGGCTGCGAAGGCATCACCCCCCTCCA GACCCAGGTGGCCAGGGCTGCGAGGGCATCACCCCCCTCCA < 41bp 0.508720401311688 0.753534719241823 0.69289786 0.9384309 prediction 0.48962863586027 Functional Gain - TONSL ENSG00000160949 CDS Human protein_coding chr8:145662242 chr8:145662239 synonymous SNV . 0 24 hm5C_associated_SNPs_109762 0 0 1 DDX42 POSTAR2 ENCODE chr8:145662236-145662291
64251 chr12 56863100 56863100 1 + C A COAD 56863099 + 56863079 56863119 41 CATTGGTGTTGATGATCGTTCCTGGGTGTTCACCTATGCCC CATTGGTGTTGATGATCGTTCATGGGTGTTCACCTATGCCC < 41bp 0.533002149014737 0.777814271500973 0.2833985 0.46739826 prediction 0.489624244972473 Functional Gain - SPRYD4 ENSG00000176422 CDS Human protein_coding chr12:56863099 chr12:56863100 synonymous SNV . 0 22 hm5C_associated_SNPs_109764 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:56863077-56863108
64251 chrX 22112163 22112163 1 + C A COAD 22112162 + 22112142 22112182 41 GCTTTTAGGAGCTAACAGTTCCAGAGCAGAGCATGACATGA GCTTTTAGGAGCTAACAGTTCAAGAGCAGAGCATGACATGA < 41bp 0.516762256713154 0.761571992375075 0.40085614 0.42079195 prediction 0.489619471323843 Functional Gain - PHEX ENSG00000102174 CDS Human protein_coding chrX:22112162 chrX:22112163 synonymous SNV . 0 22 hm5C_associated_SNPs_109765 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:22112145-22112165
64251 chr16 14755801 14755801 1 + C A UCEC 14755800 + 14755780 14755820 41 TATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTAC TATACGCCCTCAAGAGCTCCCACAGGCTGAGTCTGCTCTAC < 41bp 0.479534966077282 0.744805140463917 0.11079261 0.26234782 prediction 0.489610280927834 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755800 chr16:14755801 nonsynonymous SNV 0.304 4 22 hm5C_associated_SNPs_109766 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr16:14755778-14755804
64251 chr4 56738082 56738082 1 + C T LUSC 56738081 + 56738061 56738101 41 TGATTTGCGAGAGCTTTTTGCCCGGAGACTGGCCAGTCACC TGATTTGCGAGAGCTTTTTGCTCGGAGACTGGCCAGTCACC < 41bp 0.524233920021287 0.769029289337391 0.27615464 0.20093167 prediction 0.489590738632207 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56738081 chr4:56738082 synonymous SNV . 0 22 hm5C_associated_SNPs_109772 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:56738052-56738088
64251 chrX 48672893 48672893 1 + C A UCEC 48672889 + 48672869 48672909 41 CGCTACGAGCAGGGTAGGTTCTGGCCCCACCTGAAGGCCTC CGCTACGAGCAGGGTAGGTTCTGGACCCACCTGAAGGCCTC < 41bp 0.678617554424727 0.923397816433455 0.8458357 0.92228556 prediction 0.489560524017456 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48672889 chrX:48672893 nonsynonymous SNV 0.944 5 25 hm5C_associated_SNPs_109774 0 0 4 DDX24 POSTAR2 ENCODE chrX:48672850-48672934
64251 chr11 13984541 13984541 1 + C A UCEC 13984540 + 13984520 13984560 41 GGCCGCGGCGCTGGCCTTCTCCGACGAGACCCTGGACAAAG GGCCGCGGCGCTGGCCTTCTCAGACGAGACCCTGGACAAAG < 41bp 0.505674958307295 0.750441742990153 0.32633212 0.8743217 prediction 0.489533569365716 Functional Gain - SPON1 ENSG00000152268 ncRNA_exonic Human other chr11:13984540 chr11:13984541 . . 0 22 hm5C_associated_SNPs_109778 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:13984511-13984547
64251 chr14 103059316 103059316 1 + C G rs569399655 103059315 + 103059295 103059335 41 CGCCTCCGCCGCCGCCGCCTCCGCCGCCGCCTCGGCCGCCT CGCCTCCGCCGCCGCCGCCTCGGCCGCCGCCTCGGCCGCCT < 41bp 0.606870438412369 0.851632107959799 0.05405143 0.2353405 prediction 0.489523339094859 Functional Gain - RCOR1 ENSG00000089902 CDS Human protein_coding chr14:103059315 chr14:103059316 synonymous SNV . 0 22 hm5C_associated_SNPs_109780 0 0 4 BUD13 POSTAR2 ENCODE chr14:103059311-103059375
64251 chr7 99017041 99017041 1 - G T LUSC 99017042 - 99017022 99017062 41 AGCCAGAGCAGCCACGACAGCCACAGTGTGTGCACTCGATG AGCCAGAGCAGCCACGACAGCAACAGTGTGTGCACTCGATG < 41bp 0.548747089673911 0.79350437755387 0.19198051 0.16241014 prediction 0.489514575759918 Functional Gain - BUD31 ENSG00000106245 CDS Human protein_coding chr7:99017042 chr7:99017041 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_109782 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:99017024-99017051
64251 chr5 174156229 174156229 1 + T G UCEC 174156226 + 174156206 174156246 41 AATCGGAAGCCGCGCACGCCCTTTACCACATCCCAGCTCCT AATCGGAAGCCGCGCACGCCCTTGACCACATCCCAGCTCCT < 41bp 0.359608024453737 0.744747129171326 0.05248958 0.26637608 prediction 0.489494258342651 Functional Gain - MSX2 ENSG00000120149 CDS Human protein_coding chr5:174156226 chr5:174156229 nonsynonymous SNV 0.815 5 24 hm5C_associated_SNPs_109784 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:174156223-174156243
64251 chr8 86027662 86027662 1 + T C BLCA 86027660 + 86027640 86027680 41 CCTATCGATGAGTTAGTTCCCTTGGAACAGTTTGCAAGTAC CCTATCGATGAGTTAGTTCCCTCGGAACAGTTTGCAAGTAC < 41bp 0.543390472663626 0.788134060614074 0.053593844 0.08462736 prediction 0.489487175900896 Functional Gain - LRRCC1 ENSG00000133739 CDS Human protein_coding chr8:86027660 chr8:86027662 nonsynonymous SNV 0.052 2 23 hm5C_associated_SNPs_109785 0 0 2 LIN28B POSTAR2 ENCODE chr8:86027629-86027674
64251 chr4 52942965 52942965 1 + C T SKCM 52942964 + 52942944 52942984 41 GGTCCTCCAGGAGCCGGTCTCCCAGCCCTGCCCCTCGCAGC GGTCCTCCAGGAGCCGGTCTCTCAGCCCTGCCCCTCGCAGC < 41bp 0.522424775637938 0.767148337088859 0.43726498 0.30622125 prediction 0.489447122901842 Functional Gain - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52942964 chr4:52942965 nonsynonymous SNV 0.083 2 22 hm5C_associated_SNPs_109787 0 0 1 BUD13 POSTAR2 ENCODE chr4:52942933-52943058
64251 chr17 46128887 46128887 1 + C A PRAD 46128886 + 46128866 46128906 41 GCCTCCAAGATGTGACAGGCCCAGACAACGGGGTGCGAGAA GCCTCCAAGATGTGACAGGCCAAGACAACGGGGTGCGAGAA < 41bp 0.53383693055349 0.778553656217755 0.08636615 0.17850924 prediction 0.48943345132853 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128886 chr17:46128887 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_109792 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46128849-46128913
64251 chr19 35630999 35630999 1 + C A LUSC 35630998 + 35630978 35631018 41 AGGACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTGTGT AGGACAATGGCGTCTCTTGGCAACATCTTGGTTTTCTGTGT < 41bp 0.52260138563585 0.767313462002071 0.14843366 0.18760762 prediction 0.489424152732442 Functional Gain - FXYD1 ENSG00000266964 CDS Human protein_coding chr19:35630998 chr19:35630999 nonsynonymous SNV 0.932 0 22 hm5C_associated_SNPs_109796 0 0 1 DDX55 POSTAR2 ENCODE chr19:35630980-35631006
64251 chr1 233802530 233802530 1 + T C COAD 233802528 + 233802508 233802548 41 TCCAAGCAGGTGGTGGCCATCGTCCATGCCGTGCTCCTTGG TCCAAGCAGGTGGTGGCCATCGCCCATGCCGTGCTCCTTGG < 41bp 0.478271846576765 0.74470903434603 0.8669723 0.73752034 prediction 0.48941806869206 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802528 chr1:233802530 nonsynonymous SNV 0.835 0 23 hm5C_associated_SNPs_109797 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:233802529-233802530
64251 chr2 28627145 28627145 1 + C T HNSC 28627144 + 28627124 28627164 41 CTGCCGGGCCTGGCCTCTGTCCCTGGACACATGGCCCTCCC CTGCCGGGCCTGGCCTCTGTCTCTGGACACATGGCCCTCCC < 41bp 0.479909071434077 0.744706128889871 0.11722407 0.072381884 prediction 0.489412257779742 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28627144 chr2:28627145 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_109798 0 0 1 IGF2BP1 POSTAR2 ENCODE chr2:28627082-28627157
64251 chr19 36431077 36431077 1 + C A COAD 36431076 + 36431056 36431096 41 GCTGGCCTTTGGCGGGAACCCCCTGCACTGCAACTGCGAGC GCTGGCCTTTGGCGGGAACCCACTGCACTGCAACTGCGAGC < 41bp 0.521367397576733 0.766053759006228 0.54389745 0.3846516 prediction 0.489372722858989 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36431076 chr19:36431077 synonymous SNV . 0 22 hm5C_associated_SNPs_109803 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:36431049-36431080
64251 chr3 136573517 136573517 1 + T C LUSC 136573515 + 136573495 136573535 41 GGGAGAGCTTTCTTTGGAACCATGGATACCCTACCTCCACC GGGAGAGCTTTCTTTGGAACCACGGATACCCTACCTCCACC < 41bp 0.543149684187784 0.787826825441058 0.8539347 0.88574135 prediction 0.489354282506548 Functional Gain - SLC35G2 ENSG00000168917 CDS Human protein_coding chr3:136573515 chr3:136573517 nonsynonymous SNV 0.708 1 23 hm5C_associated_SNPs_109808 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:136573494-136573528
64251 chr3 14489185 14489185 1 + C A SKCM 14489184 + 14489164 14489204 41 TACTACCTGTTCCAGTCCTTCCAGAAGGAGCTGCCCTGGGC TACTACCTGTTCCAGTCCTTCAAGAAGGAGCTGCCCTGGGC < 41bp 0.536744891340543 0.781409012678855 0.58705884 0.7422993 prediction 0.489328242676624 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14489184 chr3:14489185 nonsynonymous SNV 0.912 1 22 hm5C_associated_SNPs_109812 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:14489180-14489200
64251 chr2 101598822 101598822 1 + C T SKCM 101598821 + 101598801 101598841 41 CAGGAGCAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGT CAGGAGCAGCTCTGCCTGGTCTAGGACTCCAACGTCCAGGT < 41bp 0.51174691961294 0.756405964418013 0.50734556 0.16284928 prediction 0.489318089610147 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101598821 chr2:101598822 stopgain 1.000 1 22 hm5C_associated_SNPs_109814 0 0 5 GRWD1 POSTAR2 ENCODE chr2:101598707-101598877
64251 chr1 212238331 212238331 1 + C T UCEC 212238330 + 212238310 212238350 41 ACAAGCAAACCCCTTCAAAACCCAAGAAGAAACAGAATTCA ACAAGCAAACCCCTTCAAAACTCAAGAAGAAACAGAATTCA < 41bp 0.48552130647215 0.744642357001892 0.20896962 0.12642735 prediction 0.489284714003784 Functional Gain - DTL ENSG00000143476 CDS Human protein_coding chr1:212238330 chr1:212238331 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_109817 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067861 chr1:212238295-212238352
64251 chr14 77928548 77928548 1 + C T SKCM 77928547 + 77928527 77928567 41 ACAAAGGACATGTGGAGATCCCCAATTTGTCTGATGAAAAC ACAAAGGACATGTGGAGATCCTCAATTTGTCTGATGAAAAC < 41bp 0.550391682808063 0.795033825144796 0.039455146 0.76161265 prediction 0.489284284673468 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77928547 chr14:77928548 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109818 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:77928520-77928560
64251 chr20 42232877 42232877 1 + T A STAD 42232873 + 42232853 42232893 41 ATTTCCATCCTAAAGAAGCTCTAGTTTCCAGTGGAGTCTTG ATTTCCATCCTAAAGAAGCTCTAGATTCCAGTGGAGTCTTG < 41bp 0.406885923746401 0.744638141563119 0.103274226 0.13786358 prediction 0.489276283126239 Functional Gain - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42232873 chr20:42232877 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_109819 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:42232865-42232894
64251 chr7 75614179 75614179 1 + C T UCEC 75614178 + 75614158 75614198 41 ACCTGGACATCACCAACCCGCCGCGTACCAACGTGCTGTAC ACCTGGACATCACCAACCCGCTGCGTACCAACGTGCTGTAC < 41bp 0.500529272123719 0.745162599535967 0.034795374 0.031095028 prediction 0.489266654824495 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75614178 chr7:75614179 nonsynonymous SNV 0.072 5 22 hm5C_associated_SNPs_109821 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:75614132-75614189
64251 chr9 130868088 130868088 1 + C A LUAD 130868084 + 130868064 130868104 41 TCGAGAAGGAGGGGCCAGGTCACTCTGGCGGGGCAATGGCA TCGAGAAGGAGGGGCCAGGTCACTATGGCGGGGCAATGGCA < 41bp 0.308538000403201 0.744629877900229 0.26270163 0.19012904 prediction 0.489259755800458 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868084 chr9:130868088 synonymous SNV . 0 25 hm5C_associated_SNPs_109823 0 0 2 BUD13 POSTAR2 ENCODE chr9:130868030-130868127
64251 chr8 141521736 141521736 1 + C G rs201295253 141521735 + 141521715 141521755 41 GGAGGCGTTGGTGCTCACGGCCAAGGCCACGGTGAGGGGGC GGAGGCGTTGGTGCTCACGGCGAAGGCCACGGTGAGGGGGC < 41bp 0.594360315423975 0.838989630727143 0.33217523 0.41078797 prediction 0.489258630606336 Functional Gain - CHRAC1 ENSG00000104472 CDS Human protein_coding chr8:141521735 chr8:141521736 synonymous SNV . 0 22 hm5C_associated_SNPs_109824 0 0 2 DDX3X POSTAR2 ENCODE chr8:141521689-141521736
64251 chr17 46926728 46926728 1 + C T SKCM 46926727 + 46926707 46926747 41 TCAGACATGCAGGCTGAGCTCCAAAAGAAGCAGGTATGGCT TCAGACATGCAGGCTGAGCTCTAAAAGAAGCAGGTATGGCT < 41bp 0.495624629718459 0.744628118587071 0.28183067 0.5337714 prediction 0.489256237174141 Functional Gain - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46926727 chr17:46926728 stopgain 0.869 0 22 hm5C_associated_SNPs_109825 0 0 2 UCHL5 POSTAR2 ENCODE chr17:46926650-46926736
64251 chr20 2846129 2846129 1 + C G rs142902093 2846125 + 2846105 2846145 41 GTTTTCCAAGAGCAAGAAATCACCCATTGGCTACCTGGTGA GTTTTCCAAGAGCAAGAAATCACCGATTGGCTACCTGGTGA < 41bp 0.465245536668074 0.74462267077206 0.13951698 0.32028866 prediction 0.489245341544119 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2846125 chr20:2846129 synonymous SNV . 0 25 hm5C_associated_SNPs_109828 0 0 4 BUD13 POSTAR2 ENCODE chr20:2846101-2846180
64251 chr1 45243397 45243397 1 + C T UCEC 45243396 + 45243376 45243416 41 TCGTGCTCATCGACAGCACACCGTACCGACAGTGGTACGAG TCGTGCTCATCGACAGCACACTGTACCGACAGTGGTACGAG < 41bp 0.511661581155193 0.756281283684871 0.020472944 0.046601683 prediction 0.489239405059356 Functional Gain - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243396 chr1:45243397 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_109829 0 0 47 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243283-45243456
64251 chr2 177016754 177016754 1 + C A LUAD 177016750 + 177016730 177016770 41 CGGGACGGCACTCAAGCAGCCGGCCGTGGTCTACCCCTGGA CGGGACGGCACTCAAGCAGCCGGCAGTGGTCTACCCCTGGA < 41bp 0.676565995341221 0.921173202040969 0.27004793 0.3064741 prediction 0.489214413399496 Functional Gain - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016750 chr2:177016754 synonymous SNV . 0 25 hm5C_associated_SNPs_109837 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:177016740-177016760
64251 chr14 70181434 70181434 1 + T G rs79496256 70181431 + 70181411 70181451 41 CTCTTAATTTCCAGTTGAAACCCTAGTAGAATTGTGAATGA CTCTTAATTTCCAGTTGAAACCCGAGTAGAATTGTGAATGA < 41bp 0.432231760709051 0.744603927946933 0.09590292 0.1806323 prediction 0.489207855893865 Functional Gain - SUSD6 ENSG00000100647 UTR3 Human protein_coding chr14:70181431 chr14:70181434 . . 0 24 hm5C_associated_SNPs_109838 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:70181415-70181440
64251 chr9 35673964 35673964 1 + C A UCEC 35673963 + 35673943 35673983 41 CCACAGTCAGCCGCATGGCTCCCCTGTGCCCCAGCCCCTGG CCACAGTCAGCCGCATGGCTCACCTGTGCCCCAGCCCCTGG < 41bp 0.510835052157217 0.755431261141507 0.024192512 0.05471185 prediction 0.489192417968579 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35673963 chr9:35673964 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_109840 0 0 1 DDX3X POSTAR2 ENCODE chr9:35673959-35674017
64251 chr11 77925386 77925386 1 + C G rs141636984 77925385 + 77925365 77925405 41 CTTTCTGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCA CTTTCTGAGAAGAACAGAGACGGAGACCTGCCCCCTTACCA < 41bp 0.467783571569393 0.744595591427145 0.42917326 0.91524804 prediction 0.489191182854291 Functional Gain - USP35 ENSG00000118369 UTR3 Human protein_coding chr11:77925385 chr11:77925386 . . 0 22 hm5C_associated_SNPs_109841 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:77925373-77925411
64251 chrX 47445378 47445378 1 + C T UCEC 47445377 + 47445357 47445397 41 CCCGGGATTGTTTCTTGGTTCCCCAGAATGTTCTCCAAGAA CCCGGGATTGTTTCTTGGTTCTCCAGAATGTTCTCCAAGAA < 41bp 0.52168516023384 0.766279042949129 0.016044736 0.5689138 prediction 0.489187765430577 Functional Gain - SYN1;TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47445377 chrX:47445378 synonymous SNV . 0 22 hm5C_associated_SNPs_109842 0 0 1 HNRNPK POSTAR2 ENCODE chrX:47445369-47445453
64251 chr11 6631065 6631065 1 + C T UCEC 6631064 + 6631044 6631084 41 CCACGACATGCACTCAATAGCCGTAGTGTAATGGTGAGGCC CCACGACATGCACTCAATAGCTGTAGTGTAATGGTGAGGCC < 41bp 0.530985485973546 0.775576605784121 0.118821084 0.15914062 prediction 0.48918223962115 Functional Gain - ILK ENSG00000166333 CDS Human protein_coding chr11:6631064 chr11:6631065 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_109844 0 0 2 PRPF8 POSTAR2 ENCODE chr11:6631026-6631126
64251 chr15 40268816 40268816 1 + C A rs201342617 40268812 + 40268792 40268832 41 GGGACGCCGCCCCCGGACTCCGGGCCCCTGGCCAAGGATGA GGGACGCCGCCCCCGGACTCCGGGACCCTGGCCAAGGATGA < 41bp 0.66739568146615 0.911983407222318 0.8926958 0.886959 prediction 0.489175451512336 Functional Gain - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40268812 chr15:40268816 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_109847 0 0 1 FMR1 POSTAR2 ENCODE chr15:40268748-40268857
64251 chr7 43827605 43827605 1 + C T HNSC 43827604 + 43827584 43827624 41 CCTTCCTCAGCGTTCCTGAACCTGATTGGCTTCGTGTCGAG CCTTCCTCAGCGTTCCTGAACTTGATTGGCTTCGTGTCGAG < 41bp 0.535730877945444 0.780301981511905 0.10833886 0.20250723 prediction 0.489142207132922 Functional Gain - BLVRA ENSG00000106605 CDS Human protein_coding chr7:43827604 chr7:43827605 synonymous SNV . 0 22 hm5C_associated_SNPs_109851 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:43827584-43827611
64251 chr20 62904594 62904594 1 + C A UCEC 62904590 + 62904570 62904610 41 GCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCG GCAGCACCAGTGGCAGTTCGCAGCATCCAGGACTTGGCTCG < 41bp 0.675548699691759 0.920116729821983 0.74140346 0.87284076 prediction 0.489136060260448 Functional Gain - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62904590 chr20:62904594 nonsynonymous SNV 0.886 4 25 hm5C_associated_SNPs_109853 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr20:62904589-62904610
64251 chr3 49020700 49020700 1 + C G HNSC 49020699 + 49020679 49020719 41 GCTGAAAGATTTCCATGACACCTAAGTTGGGATGTGGATGT GCTGAAAGATTTCCATGACACGTAAGTTGGGATGTGGATGT < 41bp 0.446645074116569 0.74454818668815 0.021321476 0.048289686 prediction 0.4890963733763 Functional Gain - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49020699 chr3:49020700 synonymous SNV . 0 22 hm5C_associated_SNPs_109857 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:49020622-49020702
64251 chr16 8900254 8900254 1 + C T SKCM 8900253 + 8900233 8900273 41 TACATTGCGAAAATTAAACTCCCGAAGAAGAGGTGGGTTTG TACATTGCGAAAATTAAACTCTCGAAGAAGAGGTGGGTTTG < 41bp 0.485227702366208 0.744541179559154 0.2799936 0.85172945 prediction 0.489082359118309 Functional Gain - PMM2 ENSG00000140650 CDS Human protein_coding chr16:8900253 chr16:8900254 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_109861 1 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:8900217-8900255
64251 chr15 90128992 90128992 1 + C T SKCM 90128991 + 90128971 90129011 41 CCCCATCACTGGAGTTATTTCCCCACTCTCTGCCAGTGCTA CCCCATCACTGGAGTTATTTCTCCACTCTCTGCCAGTGCTA < 41bp 0.572477082325329 0.817016439237224 0.1851215 0.92693305 prediction 0.48907871382379 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90128991 chr15:90128992 synonymous SNV . 0 22 hm5C_associated_SNPs_109862 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:90128980-90129000
64251 chr4 57356796 57356796 1 + C T COAD 57356795 + 57356775 57356815 41 CTGCTTACTCACTTGTAGATCCAGAGAAAGCCAAAGCGTAT CTGCTTACTCACTTGTAGATCTAGAGAAAGCCAAAGCGTAT < 41bp 0.507589041859302 0.752119932598887 0.67969835 0.34090042 prediction 0.48906178147917 Functional Gain - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57356795 chr4:57356796 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_109863 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57356758-57356807
64251 chr14 24633877 24633877 1 + A G LUAD 24633874 + 24633854 24633894 41 CGGGCGCGTGGTGGGCGAGGCCCAGGTGCAAAGCCTGGATT CGGGCGCGTGGTGGGCGAGGCCCGGGTGCAAAGCCTGGATT < 41bp 0.514037771247732 0.758565779289173 0.81085694 0.86107665 prediction 0.489056016082883 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24633874 chr14:24633877 nonsynonymous SNV 0.900 0 24 hm5C_associated_SNPs_109864 0 0 3 PPIG POSTAR2 ENCODE chr14:24633830-24633888
64251 chrX 151908915 151908915 1 + T C CESC 151908913 + 151908893 151908933 41 CCCATTTTCCAACAACCACCCATCAACACCAAAGAGGCGAG CCCATTTTCCAACAACCACCCACCAACACCAAAGAGGCGAG < 41bp 0.534908510839064 0.779436186722433 0.029019088 0.029743522 prediction 0.489055351766738 Functional Gain - CSAG1 ENSG00000198930 CDS Human protein_coding chrX:151908913 chrX:151908915 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_109865 0 0 3 YBX3 POSTAR2 ENCODE chrX:151908915-151908932
64251 chr7 5085889 5085889 1 + C G rs376485971 5085888 + 5085868 5085908 41 CCTGGATTTGCCCCTTAGGCCCGGCCCGGGCCCCTCGGGAG CCTGGATTTGCCCCTTAGGCCGGGCCCGGGCCCCTCGGGAG < 41bp 0.496731151761232 0.744524583165769 0.08052799 0.3943797 prediction 0.489049166331538 Functional Gain - RBAK ENSG00000146587 UTR5 Human protein_coding chr7:5085888 chr7:5085889 . . 0 22 hm5C_associated_SNPs_109867 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:5085851-5085889
64251 chrX 37589843 37589843 1 + T G rs372006559 37589840 + 37589820 37589860 41 ATTCTTGCCTTGAGGCTCTGCAGTGGCAAATGGTAGGGGCA ATTCTTGCCTTGAGGCTCTGCAGGGGCAAATGGTAGGGGCA < 41bp 0.380345435434512 0.744508371701102 0.35216546 0.9138764 prediction 0.489016743402205 Functional Gain - XK ENSG00000047597 UTR3 Human protein_coding chrX:37589840 chrX:37589843 . . 0 24 hm5C_associated_SNPs_109873 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:37589817-37589847
64251 chr3 52526263 52526263 1 + C T STAD 52526262 + 52526242 52526282 41 TCATGGGCTACCAGACCTACCCGCAGGCCCTCACCCTCGTC TCATGGGCTACCAGACCTACCTGCAGGCCCTCACCCTCGTC < 41bp 0.496287198608569 0.744493661375672 0.090958804 0.19475567 prediction 0.488987322751344 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526262 chr3:52526263 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_109877 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr3:52526255-52526280
64251 chr21 44871628 44871628 1 + T A rs187469402 44871624 + 44871604 44871644 41 GTGGCCTGGGGGCCCCCACCCTGCTCTGAGCTGCCCCTTGT GTGGCCTGGGGGCCCCCACCCTGCACTGAGCTGCCCCTTGT < 41bp 0.588143528033996 0.832630600419735 0.063566774 0.1598022 prediction 0.488974144771477 Functional Gain - LINC00319 ENSG00000188660 ncRNA_exonic Human lincRNA chr21:44871624 chr21:44871628 . . 0 25 hm5C_associated_SNPs_109880 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr21:44871617-44871662
64251 chr17 41343547 41343547 1 + C T SKCM 41343546 + 41343526 41343566 41 CAATCCATGGACTCCAGAGCCCCAAGTCTCCTTTAGGCCGA CAATCCATGGACTCCAGAGCCTCAAGTCTCCTTTAGGCCGA < 41bp 0.566484651787588 0.810971081888356 0.09009996 0.4182619 prediction 0.488972860201536 Functional Gain - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41343546 chr17:41343547 nonsynonymous SNV 0.978 1 22 hm5C_associated_SNPs_109881 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr17:41343526-41343547
64251 chr16 332725 332725 1 + C A UCEC 332721 + 332701 332741 41 GGTGCGCTGGTGCGGGGCCCCTATCTGGTGGTGTCCCTCTT GGTGCGCTGGTGCGGGGCCCCTATATGGTGGTGTCCCTCTT < 41bp 0.387459998830044 0.744472603824372 0.038742125 0.91877425 prediction 0.488945207648744 Functional Gain - ARHGDIG ENSG00000242173 CDS Human protein_coding chr16:332721 chr16:332725 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_109884 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:332720-332743
64251 chr5 138260270 138260270 1 + C T COAD 138260269 + 138260249 138260289 41 AAGGATGTGGATGGCCTGGACCGCACAGCTGGTGCAATTCG AAGGATGTGGATGGCCTGGACTGCACAGCTGGTGCAATTCG < 41bp 0.543259731370118 0.787724571616068 0.19784367 0.29315266 prediction 0.488929680491901 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138260269 chr5:138260270 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_109887 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:138260201-138260271
64251 chr9 116026360 116026360 1 + C A rs111976327 116026356 + 116026336 116026376 41 GCTCACACACTTTGGGAGGCCAAGCGGGGGTGCAGATCACC GCTCACACACTTTGGGAGGCCAAGAGGGGGTGCAGATCACC < 41bp 0.633577234518187 0.87803438721669 0.722346 0.84425527 prediction 0.488914305397007 Functional Gain - SLC31A1 ENSG00000136868 UTR3 Human protein_coding chr9:116026356 chr9:116026360 . . 0 25 hm5C_associated_SNPs_109889 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:116026341-116026392
64251 chr1 180772657 180772657 1 + T C STAD 180772655 + 180772635 180772675 41 AGCCAGTCTTCCACTTGTCCCATGAGGAACGTGTCCAACAT AGCCAGTCTTCCACTTGTCCCACGAGGAACGTGTCCAACAT < 41bp 0.584709591237569 0.829162889250915 0.13958725 0.14315611 prediction 0.488906596026692 Functional Gain - XPR1 ENSG00000143324 CDS Human protein_coding chr1:180772655 chr1:180772657 synonymous SNV . 0 23 hm5C_associated_SNPs_109891 0 0 1 DDX24 POSTAR2 ENCODE chr1:180772651-180772776
64251 chr5 140589958 140589958 1 + C A UCEC 140589954 + 140589934 140589974 41 GGTCAACTACTCGCTGCTGCCGTCCCAGGACCCGCACCTGC GGTCAACTACTCGCTGCTGCCGTCACAGGACCCGCACCTGC < 41bp 0.344823648439715 0.744412367849482 0.035943955 0.057120472 prediction 0.488824735698963 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589954 chr5:140589958 synonymous SNV . 0 25 hm5C_associated_SNPs_109895 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr2 239013340 239013340 1 + C A STAD 239013336 + 239013316 239013356 41 CGCAGTGGCGCCTCCCCACTCTACCTGGCCTGCCAGGAGGG CGCAGTGGCGCCTCCCCACTCTACATGGCCTGCCAGGAGGG < 41bp 0.307723262506039 0.7443984347675 0.20915169 0.93801534 prediction 0.488796869535 Functional Gain - ESPNL ENSG00000144488 CDS Human protein_coding chr2:239013336 chr2:239013340 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_109899 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr2:239013316-239013347
64251 chr4 1729779 1729779 1 + C T GBM 1729778 + 1729758 1729798 41 CCCAGCACAAAGCGGAGACTCCGCACGGAGCCGAGGAAGAA CCCAGCACAAAGCGGAGACTCTGCACGGAGCCGAGGAAGAA < 41bp 0.500826783694268 0.745206719258375 0.16669491 0.14595875 prediction 0.488759871128214 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1729778 chr4:1729779 nonsynonymous SNV 0.014 0 22 hm5C_associated_SNPs_109901 0 0 2 FMR1 POSTAR2 ENCODE chr4:1729705-1729780
64251 chr3 49042491 49042491 1 + C A OV 49042490 + 49042470 49042510 41 CCTCCTGCCGGCAAGTATCTCCCAACTGGGGGCTGCCTTCA CCTCCTGCCGGCAAGTATCTCACAACTGGGGGCTGCCTTCA < 41bp 0.547956544964647 0.792331671102143 0.16904521 0.10861102 prediction 0.488750252274992 Functional Gain - P4HTM ENSG00000178467 CDS Human protein_coding chr3:49042490 chr3:49042491 nonsynonymous SNV 0.843 1 22 hm5C_associated_SNPs_109903 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:49042471-49042492
64251 chr19 17895614 17895614 1 + A G UCEC 17895611 + 17895591 17895631 41 GGAGCCACCCTCACCCAGGTCTCAGTGGAGTACGGCTACCG GGAGCCACCCTCACCCAGGTCTCGGTGGAGTACGGCTACCG < 41bp 0.5038499216755 0.748223574055872 0.20025033 0.25806215 prediction 0.488747304760744 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17895611 chr19:17895614 synonymous SNV . 0 24 hm5C_associated_SNPs_109906 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17895589-17895627
64251 chr6 43106993 43106993 1 + C T SKCM 43106992 + 43106972 43107012 41 CGGCAGCATCGAGGCGCAAGCCCGTGTCCAAGTGCTGGGTG CGGCAGCATCGAGGCGCAAGCTCGTGTCCAAGTGCTGGGTG < 41bp 0.506830987236492 0.751199852839314 0.34728372 0.2989231 prediction 0.488737731205644 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43106992 chr6:43106993 synonymous SNV . 0 22 hm5C_associated_SNPs_109907 0 0 5 LARP7 POSTAR2 ENCODE chr6:43106963-43107003
64251 chr7 6193464 6193464 1 + T G rs61732616 6193461 + 6193441 6193481 41 TGGCAGCCCCGCCGCCGAATCCCTGGAGGAGCCAGATGCGG TGGCAGCCCCGCCGCCGAATCCCGGGAGGAGCCAGATGCGG < 41bp 0.347333691404996 0.744351434426552 0.28207144 0.8598213 prediction 0.488702868853104 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193461 chr7:6193464 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_109910 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:6193432-6193465
64251 chr15 100214652 100214652 1 + C T SKCM 100214651 + 100214631 100214671 41 GTCACAGTTCCAGTGACCAGCCCCAATGCTTTGTCCTACAC GTCACAGTTCCAGTGACCAGCTCCAATGCTTTGTCCTACAC < 41bp 0.576591404514897 0.820937054585806 0.07899633 0.91764617 prediction 0.488691300141818 Functional Gain - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100214651 chr15:100214652 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_109911 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:100214625-100214654
64251 chr1 151237991 151237991 1 + C T BLCA 151237990 + 151237970 151238010 41 CTGATGCTCTCATCAGTTCTCCGATTTTGGCTGGTGAAGGT CTGATGCTCTCATCAGTTCTCTGATTTTGGCTGGTGAAGGT < 41bp 0.499097449539356 0.744338812543208 0.3702106 0.2542924 prediction 0.488677625086415 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151237990 chr1:151237991 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_109915 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151237946-151237992
64251 chr21 42694963 42694963 1 + C G rs528828387 42694959 + 42694939 42694979 41 CTGTCCAGTGCTGCCTATAGCATCCGCAGCATCGGGGAGAG CTGTCCAGTGCTGCCTATAGCATCGGCAGCATCGGGGAGAG < 41bp 0.452834109057101 0.744333738615272 0.05946541 0.28507915 prediction 0.488667477230545 Functional Gain - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42694959 chr21:42694963 nonsynonymous SNV 0.013 0 25 hm5C_associated_SNPs_109919 0 0 2 DDX3X POSTAR2 ENCODE chr21:42694920-42694994
64251 chr2 159526282 159526282 1 + C T UCEC 159526281 + 159526261 159526301 41 CGGCTCCCCGGCGGCAATGGCCCCAGTGTCTTGTCTGATGA CGGCTCCCCGGCGGCAATGGCTCCAGTGTCTTGTCTGATGA < 41bp 0.578797217385752 0.82311238331158 0.16008532 0.9096129 prediction 0.488630331851656 Functional Gain - PKP4 ENSG00000144283 CDS Human protein_coding chr2:159526281 chr2:159526282 nonsynonymous SNV 0.882 1 22 hm5C_associated_SNPs_109922 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:159526259-159526297
64251 chr6 36449352 36449352 1 + T C UCEC 36449350 + 36449330 36449370 41 TCTCTGCAGGTGCTTTACTCCATGAACTGTCTAATGACGGT TCTCTGCAGGTGCTTTACTCCACGAACTGTCTAATGACGGT < 41bp 0.585681972631954 0.829995535276406 0.013446003 0.021701336 prediction 0.488627125288904 Functional Gain - KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36449350 chr6:36449352 stoploss . 0 23 hm5C_associated_SNPs_109925 0 0 6 SF3A3 POSTAR2 ENCODE chr6:36449292-36449364
64251 chr3 131101009 131101009 1 + C A SARC 131101008 + 131100988 131101028 41 GGAGCTGGGCGAAGCGGCTGCCGCTTTCCGCGTGGAGCGCA GGAGCTGGGCGAAGCGGCTGCAGCTTTCCGCGTGGAGCGCA < 41bp 0.500424914662054 0.744690503634296 0.25764507 0.38489574 prediction 0.488531177944485 Functional Gain - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131101008 chr3:131101009 synonymous SNV . 0 22 hm5C_associated_SNPs_109932 0 0 6 DDX3X POSTAR2 ENCODE chr3:131101000-131101068
64251 chr14 101195281 101195281 1 + C A LUAD 101195280 + 101195260 101195300 41 CCACCCATTGCAGGTGCCAGCCTGGCTGGCAGGGTCCCCTT CCACCCATTGCAGGTGCCAGCATGGCTGGCAGGGTCCCCTT < 41bp 0.547884160477433 0.792149295587378 0.3414917 0.58648086 prediction 0.488530270219891 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195280 chr14:101195281 nonsynonymous SNV 0.970 3 22 hm5C_associated_SNPs_109933 0 0 12 BUD13 POSTAR2 ENCODE chr14:101195259-101195299
64251 chr11 61554337 61554337 1 + C A rs547468837 61554333 + 61554313 61554353 41 TACTCAGTGCCTGGTGAAGCCACCCTCAGCCCTTCACAGGC TACTCAGTGCCTGGTGAAGCCACCATCAGCCCTTCACAGGC < 41bp 0.335843512839562 0.744259318832379 0.029179633 0.16174823 prediction 0.488518637664759 Functional Gain - MYRF ENSG00000124920 UTR3 Human protein_coding chr11:61554333 chr11:61554337 . . 0 25 hm5C_associated_SNPs_109935 0 0 3 DDX3X POSTAR2 ENCODE chr11:61554320-61554351
64251 chr12 97334303 97334303 1 + C A LUAD 97334299 + 97334279 97334319 41 AGTAGTTTAGGTGACATGTTCTCACCTATCAGAGATGGTAA AGTAGTTTAGGTGACATGTTCTCAACTATCAGAGATGGTAA < 41bp 0.319578347501781 0.744254053343916 0.055766612 0.043823183 prediction 0.488508106687833 Functional Gain - NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97334299 chr12:97334303 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_109936 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:97334277-97334313
64251 chr12 69090669 69090669 1 + T C rs149960020 69090667 + 69090647 69090687 41 CTTCGAGTACAGTTTTTGATCTTGTGGAAGAGTATGAAAAC CTTCGAGTACAGTTTTTGATCTCGTGGAAGAGTATGAAAAC < 41bp 0.459066408826147 0.74424103279648 0.08741629 0.17483091 prediction 0.48848206559296 Functional Gain - NUP107 ENSG00000111581 CDS Human protein_coding chr12:69090667 chr12:69090669 synonymous SNV . 0 23 hm5C_associated_SNPs_109939 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:69090647-69090696
64251 chr1 150300844 150300844 1 + C T HNSC 150300843 + 150300823 150300863 41 AGTAAAGAAGCGACGAATACCCCGTTTTGAGGAGGTGGAAG AGTAAAGAAGCGACGAATACCTCGTTTTGAGGAGGTGGAAG < 41bp 0.515451443297662 0.759678728385633 0.011362523 0.023168802 prediction 0.488454570175942 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150300843 chr1:150300844 synonymous SNV . 0 22 hm5C_associated_SNPs_109943 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:150300763-150300858
64251 chr15 85347121 85347121 1 + C G rs182114235 85347117 + 85347097 85347137 41 ACCCAGGTGGCATGGGGTTGCGCCCAGCAGGATGTAGTGGA ACCCAGGTGGCATGGGGTTGCGCCGAGCAGGATGTAGTGGA < 41bp 0.458616125053723 0.744219524382902 0.13722819 0.6233327 prediction 0.488439048765803 Functional Gain - ZNF592 ENSG00000166716 UTR3 Human protein_coding chr15:85347117 chr15:85347121 . . 0 25 hm5C_associated_SNPs_109944 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr15:85347095-85347121
64251 chr19 50906396 50906396 1 + C A UCEC 50906395 + 50906375 50906415 41 GAGCCGGAGCCCTTCCTACGCCTGGCGCTCACCCTGCGGCC GAGCCGGAGCCCTTCCTACGCATGGCGCTCACCCTGCGGCC < 41bp 0.507564749501198 0.751781632013936 0.474503 0.56801516 prediction 0.488433765025477 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50906395 chr19:50906396 nonsynonymous SNV 0.619 1 22 hm5C_associated_SNPs_109946 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50906388-50906410
64251 chr7 6777092 6777092 1 + C A OV 6777088 + 6777068 6777108 41 TTCTGAGGGGTTCAGCATCCCAGACACGGGCAGTCACTGCA TTCTGAGGGGTTCAGCATCCCAGAAACGGGCAGTCACTGCA < 41bp 0.356564798058476 0.744204415615636 0.17988625 0.39541814 prediction 0.488408831231272 Functional Gain - PMS2CL ENSG00000187953 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:6777088 chr7:6777092 . . 0 25 hm5C_associated_SNPs_109950 0 0 1 EIF3H POSTAR2 ENCODE chr7:6777061-6777147
64251 chr15 89193841 89193841 1 + C G rs561679671 89193837 + 89193817 89193857 41 GCAGGTGCTCTGCAGCAGGACAGGCCGTCAGTTAAGGCACC GCAGGTGCTCTGCAGCAGGACAGGGCGTCAGTTAAGGCACC < 41bp 0.444438180924561 0.744196324960787 0.21247298 0.7985797 prediction 0.488392649921575 Functional Gain - ISG20 ENSG00000172183 intronic Human protein_coding chr15:89193837 chr15:89193841 . . 0 25 hm5C_associated_SNPs_109951 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:89193773-89193858
64251 chr3 51671476 51671476 1 + C G BLCA 51671475 + 51671455 51671495 41 GACGTCCGCCTCATGCGGTACCGGAGCCATGTCCTGCACAG GACGTCCGCCTCATGCGGTACGGGAGCCATGTCCTGCACAG < 41bp 0.592490297969794 0.836684285448093 0.7867265 0.29965085 prediction 0.488387974956598 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51671475 chr3:51671476 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_109952 0 0 2 EFTUD2 POSTAR2 ENCODE chr3:51671434-51671510
64251 chr13 113803481 113803481 1 + C A LUSC 113803477 + 113803457 113803497 41 GGGCGCACCCACGAGAAGGGCCGGCAGTCCACCAGGCTCAA GGGCGCACCCACGAGAAGGGCCGGAAGTCCACCAGGCTCAA < 41bp 0.341408756217563 0.744191760181544 0.36884117 0.36883992 prediction 0.488383520363088 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113803477 chr13:113803481 nonsynonymous SNV 0.027 1 25 hm5C_associated_SNPs_109954 0 0 4 LIN28B POSTAR2 ENCODE chr13:113803468-113803534
64251 chr17 45677071 45677071 1 + C G rs79778933 45677070 + 45677050 45677090 41 TGACAGATTATTGAGGTTGTCCCAAAAGAAGTTCTGTGCTG TGACAGATTATTGAGGTTGTCGCAAAAGAAGTTCTGTGCTG < 41bp 0.437920823376532 0.744188216473606 0.18456775 0.33983248 prediction 0.488376432947211 Functional Gain - NPEPPS ENSG00000141279 CDS Human protein_coding chr17:45677070 chr17:45677071 synonymous SNV . 0 22 hm5C_associated_SNPs_109956 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:45677039-45677072
64251 chr5 137802637 137802637 1 + C G PRAD 137802633 + 137802613 137802653 41 AGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCGTC AGTGGCCTAGTGAGCATGACCAACGCACCGGCCTCCTCGTC < 41bp 0.467222347327889 0.744182252063948 0.07083994 0.19022876 prediction 0.488364504127896 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137802633 chr5:137802637 nonsynonymous SNV 0.148 1 25 hm5C_associated_SNPs_109958 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:137802580-137802640
64251 chr5 72359713 72359713 1 + C T UCEC 72359712 + 72359692 72359732 41 TAGGCACCATTGTCCCACCTCCGAGGCCTGCTTCCAGACCA TAGGCACCATTGTCCCACCTCTGAGGCCTGCTTCCAGACCA < 41bp 0.517695847098775 0.761875586966513 0.77830106 0.2869341 prediction 0.488359479735476 Functional Gain - FCHO2 ENSG00000157107 CDS Human protein_coding chr5:72359712 chr5:72359713 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_109959 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:72359687-72359725
64251 chr17 73222192 73222192 1 + T C UCEC 73222190 + 73222170 73222210 41 GGTGAGAGCAGCCCAGAACCCCTGGACAACATCTTGTTGGC GGTGAGAGCAGCCCAGAACCCCCGGACAACATCTTGTTGGC < 41bp 0.456453817367629 0.74417123236836 0.25881782 0.335209 prediction 0.488342464736719 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73222190 chr17:73222192 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_109960 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73222178-73222243
64251 chr6 27100920 27100920 1 + C A LUAD 27100916 + 27100896 27100936 41 AAGACTCGCTCTTCTAGGGCCGGTCTCCAGTTCCCCGTGGG AAGACTCGCTCTTCTAGGGCCGGTATCCAGTTCCCCGTGGG < 41bp 0.380350758862249 0.744167415205774 0.25408578 0.3182261 prediction 0.488334830411548 Functional Gain - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27100916 chr6:27100920 nonsynonymous SNV 0.297 1 25 hm5C_associated_SNPs_109963 0 0 46 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27100820-27100940
64251 chrX 16761894 16761894 1 + C T LUAD 16761893 + 16761873 16761913 41 TCGACTTTGATCAGATGTACCCCGTGGCCCTGGTCATGCTC TCGACTTTGATCAGATGTACCTCGTGGCCCTGGTCATGCTC < 41bp 0.526465987506518 0.770630557613929 0.029410064 0.043791175 prediction 0.488329140214823 Functional Gain - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16761893 chrX:16761894 nonsynonymous SNV 0.856 4 22 hm5C_associated_SNPs_109966 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:16761860-16761900
64251 chr19 10225067 10225067 1 + T A HNSC 10225063 + 10225043 10225083 41 AGTGGTGTGGCCCTCTACGCCAGCTCCTATGTGCCCTACCA AGTGGTGTGGCCCTCTACGCCAGCACCTATGTGCCCTACCA < 41bp 0.620476839428483 0.864619483045162 0.28060704 0.2601582 prediction 0.488285287233357 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225063 chr19:10225067 nonsynonymous SNV 0.026 3 25 hm5C_associated_SNPs_109973 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr19:10225033-10225069
64251 chr1 9711820 9711820 1 + C G rs369737325 9711816 + 9711796 9711836 41 CCCAGCGCAGTCGCTCCGAGCGGCCGCGAGCAGAGCCGCCC CCCAGCGCAGTCGCTCCGAGCGGCGGCGAGCAGAGCCGCCC < 41bp 0.577353579739124 0.821492794035825 0.5367478 0.90107125 prediction 0.488278428593401 Functional Gain - PIK3CD ENSG00000171608 UTR5 Human protein_coding chr1:9711816 chr1:9711820 . . 0 25 hm5C_associated_SNPs_109974 0 0 1 DDX3X POSTAR2 ENCODE chr1:9711814-9711862
64251 chr12 54383208 54383208 1 + C A rs375042242 54383204 + 54383184 54383224 41 GAGAGAATCGGATCCGGGAACTGACCTCCAATTTTAATTTC GAGAGAATCGGATCCGGGAACTGAACTCCAATTTTAATTTC < 41bp 0.339637034823249 0.744132288931169 0.0047134757 0.08104929 prediction 0.488264577862338 Functional Gain - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54383204 chr12:54383208 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_109976 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:54383188-54383230
64251 chr1 156354353 156354353 1 + C A LUSC 156354352 + 156354332 156354372 41 CTACCCTTTCTGGACTCCCCCCCCAGACTCCCAGCACTACG CTACCCTTTCTGGACTCCCCCACCAGACTCCCAGCACTACG < 41bp 0.490122318565052 0.744121575911786 0.0070866942 0.02303946 prediction 0.488243151823572 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156354352 chr1:156354353 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_109979 0 0 4 GRWD1 POSTAR2 ENCODE chr1:156354349-156354392
64251 chr1 28599955 28599955 1 + C T UCEC 28599954 + 28599934 28599974 41 GCTGCGGGATGAGGGGACGTCCCAGGAGGAGATGGAGAGCC GCTGCGGGATGAGGGGACGTCTCAGGAGGAGATGGAGAGCC < 41bp 0.520467072220345 0.764579981589971 0.8769357 0.75746286 prediction 0.488225818739253 Functional Gain - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28599954 chr1:28599955 synonymous SNV . 0 22 hm5C_associated_SNPs_109980 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28599928-28599962
64251 chr1 60299130 60299130 1 + C A UCEC 60299129 + 60299109 60299149 41 CCCTGATTTAAACCAAATAACCGAATGTTCAGATCCAGTGG CCCTGATTTAAACCAAATAACAGAATGTTCAGATCCAGTGG < 41bp 0.537030249993058 0.781136960040657 0.5717636 0.7080996 prediction 0.488213420095197 Functional Gain - HOOK1 ENSG00000134709 CDS Human protein_coding chr1:60299129 chr1:60299130 synonymous SNV . 0 22 hm5C_associated_SNPs_109982 0 0 2 BUD13 POSTAR2 ENCODE chr1:60299072-60299177
64251 chr12 117468367 117468367 1 + C G rs2242469 117468363 + 117468343 117468383 41 TGCGTTCCCAGTTCATTTTGCAGGCGCATTCGCCCTTCCTA TGCGTTCCCAGTTCATTTTGCAGGGGCATTCGCCCTTCCTA < 41bp 0.545248177057877 0.789351857736778 0.9088409 0.93401897 prediction 0.488207361357802 Functional Gain - FBXW8 ENSG00000174989 UTR3 Human protein_coding chr12:117468363 chr12:117468367 . . 0 25 hm5C_associated_SNPs_109985 0 0 2 UPF1 POSTAR2 ENCODE chr12:117468365-117468467
64251 chr14 95030252 95030252 1 + C A UCEC 95030251 + 95030231 95030271 41 CGCGTGGGCAGTGCTCTGTTCCTGAGCCACAACCTGAAGTT CGCGTGGGCAGTGCTCTGTTCATGAGCCACAACCTGAAGTT < 41bp 0.476115214039286 0.744103387460244 0.27054447 0.37127212 prediction 0.488206774920487 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030251 chr14:95030252 nonsynonymous SNV 0.221 4 22 hm5C_associated_SNPs_109986 0 0 3 DKC1 POSTAR2 ENCODE chr14:95030235-95030321
64251 chr1 46740279 46740279 1 + C T rs150315374 46740278 + 46740258 46740298 41 CTCAATCTCATTGGGGCTAACCGGCTGGTCATGTTTGACCC CTCAATCTCATTGGGGCTAACTGGCTGGTCATGTTTGACCC < 41bp 0.512723963493493 0.756821722781753 0.26603532 0.2324644 prediction 0.488195518576519 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46740278 chr1:46740279 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_109987 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46740250-46740280
64251 chr20 2633520 2633520 1 + C G BLCA 2633516 + 2633496 2633536 41 GCACGTGCTGTTTGAGCACGCGGTCGGCTACGCGCTGCTGG GCACGTGCTGTTTGAGCACGCGGTGGGCTACGCGCTGCTGG < 41bp 0.588298309298892 0.832393644044494 0.6857231 0.889418 prediction 0.488190669491205 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2633516 chr20:2633520 synonymous SNV . 0 25 hm5C_associated_SNPs_109988 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819213 chr20:2633480-2633560
64251 chr8 28876303 28876303 1 + C T SKCM 28876302 + 28876282 28876322 41 ACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCC ACACTAAGTATGAGACCAGCCTCCATTCCAATAGAGGACCC < 41bp 0.55902884985306 0.803121189094701 0.10268977 0.93972206 prediction 0.488184678483283 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28876302 chr8:28876303 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_109989 0 0 4 DDX24 POSTAR2 ENCODE chr8:28876276-28876368
64251 chr16 29853079 29853079 1 + C T SKCM 29853078 + 29853058 29853098 41 AGCCTCCAGCCCTTGGCGCCCCGGAACAAGACCCGTGTGGT AGCCTCCAGCCCTTGGCGCCCTGGAACAAGACCCGTGTGGT < 41bp 0.53788644981643 0.781974578058721 0.5897331 0.21695349 prediction 0.488176256484581 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29853078 chr16:29853079 nonsynonymous SNV 0.195 4 22 hm5C_associated_SNPs_109991 0 0 1 SUPV3L1 POSTAR2 ENCODE chr16:29853067-29853122
64251 chr3 141162232 141162232 1 + C T SKCM 141162231 + 141162211 141162251 41 TGATGTTCCCGGGCCGCCAGCCGCAGAGGTTCCACCTCTGG TGATGTTCCCGGGCCGCCAGCTGCAGAGGTTCCACCTCTGG < 41bp 0.497670359178753 0.744085477014381 0.47870767 0.5837066 prediction 0.488170954028762 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141162231 chr3:141162232 synonymous SNV . 0 22 hm5C_associated_SNPs_109992 0 0 6 GRWD1 POSTAR2 ENCODE chr3:141162192-141162251
64251 chr2 242501798 242501798 1 + C A UCEC 242501797 + 242501777 242501817 41 ATGATCCGGCCCAGCGTCTACCGCAACGTGGCGCGTCAGCT ATGATCCGGCCCAGCGTCTACAGCAACGTGGCGCGTCAGCT < 41bp 0.491451167587402 0.74408096231283 0.16370848 0.11067614 prediction 0.488161924625661 Functional Gain - BOK ENSG00000176720 CDS Human protein_coding chr2:242501797 chr2:242501798 nonsynonymous SNV 0.959 3 22 hm5C_associated_SNPs_109995 0 0 2 DDX3X POSTAR2 ENCODE chr2:242501762-242501806
64251 chr17 76073379 76073379 1 + C T COAD 76073378 + 76073358 76073398 41 GGCCCTGGGTGGGATTGCCTCCGGGCTGGGCATGCAAAACT GGCCCTGGGTGGGATTGCCTCTGGGCTGGGCATGCAAAACT < 41bp 0.521798305666589 0.76587833151392 0.7126684 0.31297347 prediction 0.488160051694663 Functional Gain - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76073378 chr17:76073379 synonymous SNV . 0 22 hm5C_associated_SNPs_109996 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:76073360-76073380
64251 chr16 29811295 29811295 1 + C T SKCM 29811294 + 29811274 29811314 41 TCCACCAGAGGCAAAGAGAGCCCGAGGCCCTGAGGAAGAGG TCCACCAGAGGCAAAGAGAGCTCGAGGCCCTGAGGAAGAGG < 41bp 0.558457630795224 0.802536951097801 0.40094003 0.25759995 prediction 0.488158640605153 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811294 chr16:29811295 synonymous SNV . 0 22 hm5C_associated_SNPs_109998 0 0 4 DDX24 POSTAR2 ENCODE chr16:29811257-29811316
64251 chr17 78727930 78727930 1 + C T SKCM 78727929 + 78727909 78727949 41 CTGCCCATGATCCCCGACCTCCCGGCTGACCTATTCACCTC CTGCCCATGATCCCCGACCTCTCGGCTGACCTATTCACCTC < 41bp 0.517972846872909 0.76205153093769 0.20711935 0.22911263 prediction 0.488157368129564 Functional Gain - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78727929 chr17:78727930 nonsynonymous SNV 0.837 4 22 hm5C_associated_SNPs_109999 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:78727911-78727970
64251 chr19 50384543 50384543 1 + C T LUAD 50384542 + 50384522 50384562 41 TAGGTGCAGAGCCCAGCTGCCCCCAGGGCTCCTGGGCCTTC TAGGTGCAGAGCCCAGCTGCCTCCAGGGCTCCTGGGCCTTC < 41bp 0.555449291842428 0.799527087944906 0.13466454 0.9405594 prediction 0.488155592204957 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50384542 chr19:50384543 nonsynonymous SNV 0.968 0 22 hm5C_associated_SNPs_110001 0 0 4 SF3B4 POSTAR2 ENCODE chr19:50384476-50384603
64251 chr12 56625312 56625312 1 + C A STAD 56625308 + 56625288 56625328 41 AGCATGGGCCTCTGACTGGACGGGCTGCATCCCCAGCTGCA AGCATGGGCCTCTGACTGGACGGGATGCATCCCCAGCTGCA < 41bp 0.679020366388002 0.923095048046037 0.42364365 0.8161924 prediction 0.488149363316071 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625308 chr12:56625312 nonsynonymous SNV 0.129 0 25 hm5C_associated_SNPs_110003 0 0 2 PPIG POSTAR2 ENCODE chr12:56625283-56625330
64251 chr8 17104777 17104777 1 + C G rs146098391 17104776 + 17104756 17104796 41 GAGCTGGCTTTTTCCCCTGACCAAGAGCGCCTCCTCCTCCG GAGCTGGCTTTTTCCCCTGACGAAGAGCGCCTCCTCCTCCG < 41bp 0.606388562667291 0.850444847841137 0.55681086 0.8197112 prediction 0.488112570347693 Functional Gain - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17104776 chr8:17104777 synonymous SNV . 0 22 hm5C_associated_SNPs_110007 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:17104760-17104780
64251 chr14 100847986 100847986 1 + T C UCEC 100847984 + 100847964 100848004 41 CCCCGGAAAGTGCTTTTCCACCTGAGAGGCCACAGGGGCCC CCCCGGAAAGTGCTTTTCCACCCGAGAGGCCACAGGGGCCC < 41bp 0.571527052669914 0.815576782742237 0.08621243 0.048945904 prediction 0.488099460144646 Functional Gain - WDR25 ENSG00000176473 CDS Human protein_coding chr14:100847984 chr14:100847986 nonsynonymous SNV 0.914 3 23 hm5C_associated_SNPs_110009 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:100847986-100847987
64251 chr18 47110080 47110080 1 + C T GBM 47110079 + 47110059 47110099 41 CGCAGCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGCT CGCAGCTACCTGTCTCAACCCTGCAACCCCGGACGGGAGCT < 41bp 0.554489952560892 0.798538876956429 0.30102104 0.37345368 prediction 0.488097848791074 Functional Gain - LIPG ENSG00000101670 CDS Human protein_coding chr18:47110079 chr18:47110080 nonsynonymous SNV 0.003 2 22 hm5C_associated_SNPs_110010 0 0 1 SND1 POSTAR2 ENCODE chr18:47109984-47110124
64251 chr12 50869605 50869605 1 + T C UCEC 50869603 + 50869583 50869623 41 TACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGCAATAT TACCTCAGGGAGTGACTCGACGCAATGGCAAAGAGCAATAT < 41bp 0.566800331885942 0.810848192996906 0.082509935 0.05769688 prediction 0.488095722221928 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869603 chr12:50869605 synonymous SNV . 0 23 hm5C_associated_SNPs_110011 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:50869543-50869618
64251 chr6 43399885 43399885 1 + C A GBM 43399884 + 43399864 43399904 41 TCCCCCTTGTCCCCAGGAGTCCAGATTACATCCTACCCTGC TCCCCCTTGTCCCCAGGAGTCAAGATTACATCCTACCCTGC < 41bp 0.532001916816446 0.776048664799662 0.3714967 0.34546834 prediction 0.488093495966433 Functional Gain - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43399884 chr6:43399885 nonsynonymous SNV 0.077 0 22 hm5C_associated_SNPs_110013 0 0 1 U2AF2 POSTAR2 ENCODE chr6:43399866-43399909
64251 chr19 11106910 11106910 1 + C T HNSC 11106909 + 11106889 11106929 41 GCTGAAGATGAGGAGGGGTACCGCAAGCTCATCGACCAGAA GCTGAAGATGAGGAGGGGTACTGCAAGCTCATCGACCAGAA < 41bp 0.509081828584524 0.753114572598704 0.29707873 0.78798056 prediction 0.488065488028359 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11106909 chr19:11106910 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_110018 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:11106890-11106928
64251 chr2 67624779 67624779 1 + C G rs114064178 67624775 + 67624755 67624795 41 CGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAAAGTAA CGAGAGCAGCCTCCGACCGCCGCCGTGTGCAGTAAAAGTAA < 41bp 0.541528085290188 0.785550196391329 0.0389812 0.39021567 prediction 0.488044222202282 Functional Gain - ETAA1 ENSG00000143971 CDS Human protein_coding chr2:67624775 chr2:67624779 nonsynonymous SNV 0.154 0 25 hm5C_associated_SNPs_110021 0 0 2 SSB POSTAR2 GSE95683,GSM2521600 chr2:67624760-67624782
64251 chr15 40750911 40750911 1 + C T SKCM 40750910 + 40750890 40750930 41 GCCTGGAGAATGTGGCCGGTCCCCGGAGTGCAGATGAGGCT GCCTGGAGAATGTGGCCGGTCTCCGGAGTGCAGATGAGGCT < 41bp 0.532157535627803 0.776163994552176 0.19665948 0.30316228 prediction 0.488012917848747 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40750910 chr15:40750911 nonsynonymous SNV 0.971 1 22 hm5C_associated_SNPs_110024 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr15:40750909-40750945
64251 chr2 241514979 241514979 1 + C G UCEC 241514978 + 241514958 241514998 41 CAGGACCTGCTGGACTCCTTCCTGAGCTTCTTCCCGGAGCT CAGGACCTGCTGGACTCCTTCGTGAGCTTCTTCCCGGAGCT < 41bp 0.418274217412026 0.744005937702049 0.2375879 0.7107233 prediction 0.488011875404098 Functional Gain - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514978 chr2:241514979 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_110025 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr2 120517606 120517606 1 + T G rs184109842 120517604 + 120517584 120517624 41 TCCCAGGGGCCGGAATTGGGCCTGAGCGGGAGAGGAAAGAG TCCCAGGGGCCGGAATTGGGCCGGAGCGGGAGAGGAAAGAG < 41bp 0.424700886789136 0.744002384107155 0.14405817 0.38325977 prediction 0.48800476821431 Functional Gain - PTPN4 ENSG00000088179 UTR5 Human protein_coding chr2:120517604 chr2:120517606 . . 0 23 hm5C_associated_SNPs_110027 0 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr2:120517571-120517616
64251 chr16 84779110 84779110 1 + C A LGG 84779109 + 84779089 84779129 41 TCCTGTCAGCCAGCCCAAGTCCTGGGCCAGCCTCTTTCATG TCCTGTCAGCCAGCCCAAGTCATGGGCCAGCCTCTTTCATG < 41bp 0.482326278629932 0.743982028315406 0.18389392 0.43232986 prediction 0.487964056630812 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84779109 chr16:84779110 synonymous SNV . 0 22 hm5C_associated_SNPs_110037 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:84779104-84779126
64251 chr12 132404072 132404072 1 + C G rs146607520 132404068 + 132404048 132404088 41 GTGGCCGAGCTACTGTCCTCCGGCCTGCAAAGTGCCATCGA GTGGCCGAGCTACTGTCCTCCGGCGTGCAAAGTGCCATCGA < 41bp 0.458587129162939 0.743964587070236 0.4806604 0.77963626 prediction 0.487929174140473 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132404068 chr12:132404072 nonsynonymous SNV 0.630 2 25 hm5C_associated_SNPs_110041 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:132404058-132404081
64251 chr9 286593 286593 1 + C A rs529208 286589 + 286569 286609 41 GACGACTTGGACGTGGTGTTCACGCCAAAGGAATGTAGGAC GACGACTTGGACGTGGTGTTCACGACAAAGGAATGTAGGAC < 41bp 0.378146607194227 0.743933677353057 0.5633441 0.28163177 prediction 0.487867354706114 Functional Gain - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:286589 chr9:286593 nonsynonymous SNV 0.984 3 25 hm5C_associated_SNPs_110051 3 0 3 DDX24 POSTAR2 ENCODE chr9:286536-286640
64251 chr1 24078930 24078930 1 + C T UCEC 24078929 + 24078909 24078949 41 TTGCCAGTGTTGCCAGACCTCCCGTTACCCGCGATACAGGC TTGCCAGTGTTGCCAGACCTCTCGTTACCCGCGATACAGGC < 41bp 0.477034600155225 0.743928263620542 0.05283025 0.076453775 prediction 0.487856527241084 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24078929 chr1:24078930 nonsynonymous SNV 0.821 3 22 hm5C_associated_SNPs_110054 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:24078903-24078930
64251 chr16 57789314 57789314 1 + C T UCEC 57789313 + 57789293 57789333 41 GAGGATGCCATGTCACAGATCCGCAAAGGCCACGACACCAT GAGGATGCCATGTCACAGATCTGCAAAGGCCACGACACCAT < 41bp 0.550294998013396 0.794221281057389 0.22712362 0.39902946 prediction 0.487852566087987 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57789313 chr16:57789314 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_110056 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:57789301-57789336
64251 chr1 174417864 174417864 1 + C A GBM 174417860 + 174417840 174417880 41 GCTCACCAGTGCCTATTTTACTGGCTTTATTGTTTGTTTAC GCTCACCAGTGCCTATTTTACTGGATTTATTGTTTGTTTAC < 41bp 0.369159070659507 0.743889222543351 0.32697767 0.4024706 prediction 0.487778445086703 Functional Gain - GPR52 ENSG00000203737 CDS Human protein_coding chr1:174417860 chr1:174417864 synonymous SNV . 0 25 hm5C_associated_SNPs_110061 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:174417844-174417865
64251 chrX 102885176 102885176 1 + C T UCEC 102885175 + 102885155 102885195 41 AAAGGTTGGCTCGTTCTCGCCCGCAATTTAGAGGGGACATA AAAGGTTGGCTCGTTCTCGCCTGCAATTTAGAGGGGACATA < 41bp 0.498998897845348 0.743877741540976 0.088260084 0.43018106 prediction 0.487755483081952 Functional Gain - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102885175 chrX:102885176 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_110065 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:102885156-102885178
64251 chr17 25637136 25637136 1 + C G BRCA 25637135 + 25637115 25637155 41 TTTGCTGGAGGAGCAAATGACCGGTGGGTACGATCTGTATC TTTGCTGGAGGAGCAAATGACGGGTGGGTACGATCTGTATC < 41bp 0.607862530640401 0.851739911354012 0.44043577 0.92402005 prediction 0.487754761427221 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25637135 chr17:25637136 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_110066 0 0 8 BUD13 POSTAR2 ENCODE chr17:25637041-25637146
64251 chr19 47425446 47425446 1 + C A UCEC 47425445 + 47425425 47425465 41 CTGGGGCGGTTTGCTAGTTACCGGACCAGCTTCAGCGTGGG CTGGGGCGGTTTGCTAGTTACAGGACCAGCTTCAGCGTGGG < 41bp 0.521757072747644 0.765608321400709 0.5860959 0.37223312 prediction 0.487702497306131 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47425445 chr19:47425446 synonymous SNV . 0 22 hm5C_associated_SNPs_110073 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47425404-47425487
64251 chr15 69677060 69677060 1 + T G UCEC 69677058 + 69677038 69677078 41 ACTGCACTGTATATGACAGACATCAAGAATGACAGCTACTC ACTGCACTGTATATGACAGACAGCAAGAATGACAGCTACTC < 41bp 0.403246274189469 0.743839457936898 0.029796481 0.081426084 prediction 0.487678915873797 Functional Gain - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69677058 chr15:69677060 nonsynonymous SNV 0.958 0 23 hm5C_associated_SNPs_110076 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:69677046-69677068
64251 chr19 3765299 3765299 1 + C T SKCM 3765298 + 3765278 3765318 41 ACAAGGAAGGGCAGGATGTACCCCTGAAACCGGATGCTGAG ACAAGGAAGGGCAGGATGTACTCCTGAAACCGGATGCTGAG < 41bp 0.48513029284689 0.743833151883416 0.039025605 0.058692038 prediction 0.487666303766832 Functional Gain - MRPL54 ENSG00000183617 CDS Human protein_coding chr19:3765298 chr19:3765299 nonsynonymous SNV 0.452 0 22 hm5C_associated_SNPs_110077 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr19:3765278-3765303
64251 chr14 24606965 24606965 1 + T G STAD 24606962 + 24606942 24606982 41 AGATCGTGGTCCTTCTGCAGCGCTTGAAGCCTGAGATCAAG AGATCGTGGTCCTTCTGCAGCGCGTGAAGCCTGAGATCAAG < 41bp 0.341667928862014 0.743821078349047 0.099848926 0.14693496 prediction 0.487642156698095 Functional Gain - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24606962 chr14:24606965 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_110081 0 0 13 AKAP8L POSTAR2 ENCODE chr14:24606908-24606982
64251 chr1 55505668 55505668 1 + C G rs11583680 55505664 + 55505644 55505684 41 TGCGTTCCGAGGAGGACGGCCTGGCCGAAGCACCCGAGCAC TGCGTTCCGAGGAGGACGGCCTGGGCGAAGCACCCGAGCAC < 41bp 0.576951282397511 0.820760432620124 0.31682605 0.82574666 prediction 0.487618300445225 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55505664 chr1:55505668 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_110083 0 0 9 FXR2 POSTAR2 ENCODE chr1:55505649-55505683
64251 chr1 214500994 214500994 1 + C T LUSC 214500993 + 214500973 214501013 41 TGATGAATCATAGCTGTTGCCCCAATGTCATTGTGACCTAC TGATGAATCATAGCTGTTGCCTCAATGTCATTGTGACCTAC < 41bp 0.543998257464655 0.787801416507728 0.15053076 0.75131756 prediction 0.487606318086145 Functional Gain - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214500993 chr1:214500994 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_110086 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr1:214500970-214501011
64251 chr11 66613490 66613490 1 + C G LUSC 66613489 + 66613469 66613509 41 TGCTCCAGCCCCTCACGGACCCCAAGCTCTACGGCAGCCTT TGCTCCAGCCCCTCACGGACCGCAAGCTCTACGGCAGCCTT < 41bp 0.431576240521055 0.743803121787811 0.014714986 0.030095607 prediction 0.487606243575621 Functional Gain - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66613489 chr11:66613490 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_110087 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66613464-66613493
64251 chr9 2115849 2115849 1 + C A BLCA 2115848 + 2115828 2115868 41 CAGGCCCAAGACCGAGCTCACCGCATCGGGCAGCAGAACGA CAGGCCCAAGACCGAGCTCACAGCATCGGGCAGCAGAACGA < 41bp 0.514057229591267 0.757857152204534 0.26128265 0.39857662 prediction 0.487599845226533 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2115848 chr9:2115849 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_110088 0 0 2 GRWD1 POSTAR2 ENCODE chr9:2115821-2115883
64251 chr17 38420972 38420972 1 + C T SKCM 38420971 + 38420951 38420991 41 TCTGCCCCTCCCCCACCACCCCCAGGGCGGCGTGCCAACGC TCTGCCCCTCCCCCACCACCCTCAGGGCGGCGTGCCAACGC < 41bp 0.545170142820318 0.788953025823713 0.22748879 0.20824364 prediction 0.48756576600679 Functional Gain - WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38420971 chr17:38420972 nonsynonymous SNV 0.973 4 22 hm5C_associated_SNPs_110098 0 0 1 PCBP2 POSTAR2 ENCODE chr17:38420958-38421009
64251 chr16 29820927 29820927 1 + C A COAD 29820923 + 29820903 29820943 41 ACCACGGGCTCCAGGCCCCGCGGGCTGACCGCATCCTGTGC ACCACGGGCTCCAGGCCCCGCGGGATGACCGCATCCTGTGC < 41bp 0.676312235698434 0.920083823274544 0.8346623 0.87977326 prediction 0.487543175152218 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820923 chr16:29820927 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_110101 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29820865-29821031
64251 chr16 2814690 2814690 1 + C T rs78949014 2814689 + 2814669 2814709 41 ACACAGCAGTTCTGAGTTATCCCCAGATGCAGTGGAAAAGG ACACAGCAGTTCTGAGTTATCTCCAGATGCAGTGGAAAAGG < 41bp 0.530056632812297 0.773818087662979 0.28973818 0.94449836 prediction 0.487522909701364 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2814689 chr16:2814690 synonymous SNV . 0 22 hm5C_associated_SNPs_110102 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2814680-2814720
64251 chr19 54652128 54652128 1 + C A STAD 54652127 + 54652107 54652147 41 GGCTGTGGCCCCACCAGCTCCCAGTGGGCCCAGCACGACCC GGCTGTGGCCCCACCAGCTCCAAGTGGGCCCAGCACGACCC < 41bp 0.523521085200022 0.767271324460937 0.11589897 0.6971457 prediction 0.487500478521831 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54652127 chr19:54652128 synonymous SNV . 0 22 hm5C_associated_SNPs_110106 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:54652120-54652140
64251 chr5 140627114 140627114 1 + C A LUAD 140627113 + 140627093 140627133 41 GCCTCCGCGCTCGGCCACCGCCACGCTGCAAGTGCTCCTGG GCCTCCGCGCTCGGCCACCGCAACGCTGCAAGTGCTCCTGG < 41bp 0.510472847140527 0.754219059545691 0.60971254 0.71914434 prediction 0.487492424810327 Functional Gain - PCDHB15 ENSG00000113248 CDS Human protein_coding chr5:140627113 chr5:140627114 synonymous SNV . 0 22 hm5C_associated_SNPs_110107 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140627101-140627158
64251 chr12 6309673 6309673 1 + T A BRCA 6309669 + 6309649 6309689 41 CTAAGTTAGCCCTCACCATGCCGGTCAAAGGAGGCACCAAG CTAAGTTAGCCCTCACCATGCCGGACAAAGGAGGCACCAAG < 41bp 0.439089625596616 0.743742700969352 0.13612878 0.27547687 prediction 0.487485401938704 Functional Gain - CD9 ENSG00000010278 CDS Human protein_coding chr12:6309669 chr12:6309673 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_110108 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:6309660-6309680
64251 chr19 17535789 17535789 1 + C G rs200479835 17535788 + 17535768 17535808 41 CCGCGGCTGCCCGCCTGCCCCCCAGCGTCTCATAGTCCCTC CCGCGGCTGCCCGCCTGCCCCGCAGCGTCTCATAGTCCCTC < 41bp 0.419726389644993 0.743718284492819 0.034331888 0.054868907 prediction 0.487436568985637 Functional Gain - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17535788 chr19:17535789 nonsynonymous SNV 0.953 4 22 hm5C_associated_SNPs_110116 0 0 2 DDX6 POSTAR2 ENCODE chr19:17535739-17535824
64251 chr5 180651682 180651682 1 + C A COAD 180651681 + 180651661 180651701 41 TGACCGATCAGGGCATCTGTCCCAAACACCAAGAAGCCCTG TGACCGATCAGGGCATCTGTCACAAACACCAAGAAGCCCTG < 41bp 0.535524650573402 0.779241586958351 0.23132172 0.17727017 prediction 0.487433872769898 Functional Gain - TRIM41 ENSG00000146063 CDS Human protein_coding chr5:180651681 chr5:180651682 nonsynonymous SNV 0.973 3 22 hm5C_associated_SNPs_110117 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:180651658-180651683
64251 chr15 50716645 50716645 1 + C G rs72738957 50716641 + 50716621 50716661 41 CCTGGTAGCCAAGGCTAATTCTCCCTCGAGTTCTTGGGAGA CCTGGTAGCCAAGGCTAATTCTCCGTCGAGTTCTTGGGAGA < 41bp 0.471830862495923 0.743716132704901 0.2569578 0.24670506 prediction 0.487432265409802 Functional Gain - USP8 ENSG00000138592 UTR5 Human protein_coding chr15:50716641 chr15:50716645 . . 0 25 hm5C_associated_SNPs_110118 0 0 4 DDX3X POSTAR2 ENCODE chr15:50716609-50716733
64251 chr19 10394801 10394801 1 + C T ACC 10394800 + 10394780 10394820 41 TGTTCCCTGGACGGGCTGTTCCCAGTCTCGGAGGCCCAGGT TGTTCCCTGGACGGGCTGTTCTCAGTCTCGGAGGCCCAGGT < 41bp 0.539676490355894 0.783381088098025 0.09278551 0.12110564 prediction 0.487409195484262 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394800 chr19:10394801 nonsynonymous SNV 0.007 4 22 hm5C_associated_SNPs_110122 0 0 1 RPS3 POSTAR2 ENCODE chr19:10394799-10394846
64251 chr7 2686861 2686861 1 + C A rs199819544 2686860 + 2686840 2686880 41 TACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCA TACTCGCTCCGCCACGCCAACAGCACGGTGGCCGGGGTCCA < 41bp 0.485402067408557 0.743702649829413 0.32997787 0.77583826 prediction 0.487405299658826 Functional Gain - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2686860 chr7:2686861 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_110124 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:2686841-2686861
64251 chr15 42861763 42861763 1 + C G rs147634605 42861762 + 42861742 42861782 41 CGACCCTCCCGCCTCAGCCTCCGAAAGTGCTGGGAGTACAG CGACCCTCCCGCCTCAGCCTCGGAAAGTGCTGGGAGTACAG < 41bp 0.537262028822905 0.780955336370127 0.5869986 0.85395503 prediction 0.487386615094443 Functional Gain - HAUS2 ENSG00000261822 ncRNA_exonic Human antisense chr15:42861762 chr15:42861763 . . 0 22 hm5C_associated_SNPs_110128 0 0 2 UPF1 POSTAR2 ENCODE chr15:42861708-42861793
64251 chr12 121154526 121154526 1 + C T GBM 121154525 + 121154505 121154545 41 ACACCGGCATTTCTCCGCCTCCGGACAGTCGGGGCTACGTG ACACCGGCATTTCTCCGCCTCTGGACAGTCGGGGCTACGTG < 41bp 0.519074354479439 0.762761963824561 0.24698812 0.093420416 prediction 0.487375218690245 Functional Gain - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154525 chr12:121154526 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_110135 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr12:121154506-121154539
64251 chr3 128627085 128627085 1 + C T CESC 128627084 + 128627064 128627104 41 ACGGGTCTGCAGCATGCCGGCCGCATCCTGACTACCAGGAT ACGGGTCTGCAGCATGCCGGCTGCATCCTGACTACCAGGAT < 41bp 0.478160048449098 0.74367940962284 0.14900586 0.13443112 prediction 0.487358819245679 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128627084 chr3:128627085 nonsynonymous SNV 0.371 2 22 hm5C_associated_SNPs_110138 0 0 4 GRWD1 POSTAR2 ENCODE chr3:128627035-128627093
64251 chr1 227149142 227149142 1 + C A SKCM 227149138 + 227149118 227149158 41 TGGCTAAAGGCCTTGTCAAGCTGACCCAGGCGGCCGTGGAA TGGCTAAAGGCCTTGTCAAGCTGAACCAGGCGGCCGTGGAA < 41bp 0.334941589875425 0.743671226191455 0.06821588 0.108205706 prediction 0.48734245238291 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227149138 chr1:227149142 nonsynonymous SNV 0.914 1 25 hm5C_associated_SNPs_110139 0 0 7 BUD13 POSTAR2 ENCODE chr1:227149108-227149161
64251 chr19 33696841 33696841 1 + C G rs115891522 33696840 + 33696820 33696860 41 GACGGGGGCAGCCTGGGCGACCAGGGCTGCTTCTCAGAGCC GACGGGGGCAGCCTGGGCGACGAGGGCTGCTTCTCAGAGCC < 41bp 0.428328819032871 0.743643734824165 0.8769848 0.90974796 prediction 0.487287469648331 Functional Gain - LRP3 ENSG00000130881 CDS Human protein_coding chr19:33696840 chr19:33696841 nonsynonymous SNV 0.563 2 22 hm5C_associated_SNPs_110149 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:33696838-33696864
64251 chr6 135516954 135516954 1 + T A LUSC 135516950 + 135516930 135516970 41 CATTGCCGACCACACCAGACCTCATGGAGACAGTGCACCTG CATTGCCGACCACACCAGACCTCAAGGAGACAGTGCACCTG < 41bp 0.588259557222616 0.831893898054102 0.20201826 0.13856769 prediction 0.487268681662972 Functional Gain - MYB ENSG00000118513 CDS Human protein_coding chr6:135516950 chr6:135516954 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_110150 0 0 1 U2AF2 POSTAR2 ENCODE chr6:135516853-135516954
64251 chr3 49570369 49570369 1 + C A UCEC 49570365 + 49570345 49570385 41 GCAGACGAACTGGACGACTCCAAGCCCCCACCCTCCTCCAG GCAGACGAACTGGACGACTCCAAGACCCCACCCTCCTCCAG < 41bp 0.362365919159793 0.743633333871225 0.100542575 0.033765912 prediction 0.487266667742449 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49570365 chr3:49570369 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_110152 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49570290-49570412
64251 chr4 1388446 1388446 1 + C A LIHC 1388445 + 1388425 1388465 41 GCCCGCCTGCTCACACATGCCCATGTGGAGTGCCCGCCTGC GCCCGCCTGCTCACACATGCCAATGTGGAGTGCCCGCCTGC < 41bp 0.502216999821101 0.745848473755618 0.015870094 0.04877308 prediction 0.487262947869035 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388445 chr4:1388446 synonymous SNV . 0 22 hm5C_associated_SNPs_110153 0 0 2 DDX6 POSTAR2 ENCODE chr4:1388398-1388450
64251 chr15 79755573 79755573 1 + C A rs61746219 79755572 + 79755552 79755592 41 CATGCGGCTGACCGAGTTGGCCGAGGTGAAGCGGGGCCAAC CATGCGGCTGACCGAGTTGGCAGAGGTGAAGCGGGGCCAAC < 41bp 0.544627941766319 0.788254709434624 0.8888217 0.90533334 prediction 0.48725353533661 Functional Gain - KIAA1024 ENSG00000169330 CDS Human protein_coding chr15:79755572 chr15:79755573 synonymous SNV . 0 22 hm5C_associated_SNPs_110156 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:79755552-79755576
64251 chr3 14174433 14174433 1 + C A THCA 14174432 + 14174412 14174452 41 AGAGATTGGCCACAAAAACCCCAGGTGAGAGCCAGGCCCAA AGAGATTGGCCACAAAAACCCAAGGTGAGAGCCAGGCCCAA < 41bp 0.477949626772493 0.743610419562058 0.6783928 0.8105351 prediction 0.487220839124116 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14174432 chr3:14174433 synonymous SNV . 0 22 hm5C_associated_SNPs_110161 0 0 6 DDX24 POSTAR2 ENCODE chr3:14174387-14174436
64251 chr3 50684208 50684208 1 + C T LUAD 50684207 + 50684187 50684227 41 CCTCCTGTTGAAGACAGACCCCACAGAGAGGCTGACCATCA CCTCCTGTTGAAGACAGACCCTACAGAGAGGCTGACCATCA < 41bp 0.569721471824495 0.813325069422846 0.022387236 0.29270327 prediction 0.487207195196701 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50684207 chr3:50684208 synonymous SNV . 0 22 hm5C_associated_SNPs_110162 0 0 2 YBX3 POSTAR2 ENCODE chr3:50684174-50684225
64251 chr20 61920326 61920326 1 + C A rs143661100 61920322 + 61920302 61920342 41 TCCCTGGTCACCCCACTTCCCGGTCGCCGTCTGCAGCACTC TCCCTGGTCACCCCACTTCCCGGTAGCCGTCTGCAGCACTC < 41bp 0.384884485795481 0.743597005523457 0.12520587 0.33246982 prediction 0.487194011046913 Functional Gain - ARFGAP1 ENSG00000101199 UTR3 Human protein_coding chr20:61920322 chr20:61920326 . . 0 25 hm5C_associated_SNPs_110165 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:61920245-61920376
64251 chr16 84695266 84695266 1 + C T LUAD 84695265 + 84695245 84695285 41 GACTACCAAATTGGCCCCTACCGCAAGAACCTGCTATGCTA GACTACCAAATTGGCCCCTACTGCAAGAACCTGCTATGCTA < 41bp 0.48702757738632 0.74358158485604 0.24005336 0.41761062 prediction 0.487163169712079 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695265 chr16:84695266 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110169 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:84695260-84695280
64251 chr10 7763666 7763666 1 + C T LUAD 7763665 + 7763645 7763685 41 CAGAGAATATGCCCTAACTGCCGGGAGACTGCGGTAGATGG CAGAGAATATGCCCTAACTGCTGGGAGACTGCGGTAGATGG < 41bp 0.499264233566432 0.743578711580595 0.7878853 0.41726932 prediction 0.48715742316119 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7763665 chr10:7763666 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_110171 0 0 5 LIN28B POSTAR2 ENCODE chr10:7763660-7763689
64251 chr16 50667325 50667325 1 + C T LIHC 50667324 + 50667304 50667344 41 GCAAGCACTTTGTGAGGTCCCCCAAGGCCCAGGGCAAGAGT GCAAGCACTTTGTGAGGTCCCTCAAGGCCCAGGGCAAGAGT < 41bp 0.530665789919357 0.774228061149424 0.059855193 0.6490972 prediction 0.487124542460134 Functional Gain - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50667324 chr16:50667325 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_110173 0 0 5 EIF3H POSTAR2 ENCODE chr16:50667312-50667336
64251 chr17 27028590 27028590 1 + C T SKCM 27028589 + 27028569 27028609 41 AGCCCCATGATCGAAAGCACCCCCATGTCCATTGCTGGCGA AGCCCCATGATCGAAAGCACCTCCATGTCCATTGCTGGCGA < 41bp 0.477871288158945 0.743559013119216 0.15445304 0.96803313 prediction 0.487118026238432 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27028589 chr17:27028590 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_110175 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:27028583-27028621
64251 chr15 64443941 64443941 1 + C A rs140876137 64443937 + 64443917 64443957 41 CTCCGGGAGAGTTAGGGCTCCGAGCCGAGCGCGCGGAGCAG CTCCGGGAGAGTTAGGGCTCCGAGACGAGCGCGCGGAGCAG < 41bp 0.633473439679581 0.877032035428125 0.8392619 0.82629424 prediction 0.487117191497087 Functional Gain - SNX22 ENSG00000157734 UTR5 Human protein_coding chr15:64443937 chr15:64443941 . . 0 25 hm5C_associated_SNPs_110176 0 0 2 NCBP2 POSTAR2 ENCODE chr15:64443928-64444043
64251 chr17 37818555 37818555 1 + C T SKCM 37818554 + 37818534 37818574 41 GCTCAAGTCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCT GCTCAAGTCGGCCAGTAACCCTCGTGTTTGCACCTTTGTCT < 41bp 0.490442499425051 0.743549598187797 0.21581727 0.2499603 prediction 0.487099196375594 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37818554 chr17:37818555 synonymous SNV . 0 22 hm5C_associated_SNPs_110179 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:37818537-37818577
64251 chr4 2702161 2702161 1 + C T SKCM 2702160 + 2702140 2702180 41 CCCCTATGGAGCCCACCTCTCCCGGTGAGCATCAGCAGAAC CCCCTATGGAGCCCACCTCTCTCGGTGAGCATCAGCAGAAC < 41bp 0.545341007515125 0.788885839964599 0.40188456 0.21692348 prediction 0.487089664898948 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2702160 chr4:2702161 nonsynonymous SNV 0.038 4 22 hm5C_associated_SNPs_110181 0 0 4 LARP4 POSTAR2 ENCODE chr4:2702137-2702233
64251 chr17 4620555 4620555 1 + C A SKCM 4620554 + 4620534 4620574 41 CCGTCACACTGCAGCCAGGCCCAGAGGATACAGGAAAGGTA CCGTCACACTGCAGCCAGGCCAAGAGGATACAGGAAAGGTA < 41bp 0.476457690648911 0.743519565790419 0.44371322 0.40222192 prediction 0.487039131580839 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4620554 chr17:4620555 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_110184 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4620521-4620560
64251 chr1 150471087 150471087 1 + C T UCEC 150471086 + 150471066 150471106 41 GGTGGTCTGGGGGGACTGACCCGACTGCGGTGCTTCCAGCA GGTGGTCTGGGGGGACTGACCTGACTGCGGTGCTTCCAGCA < 41bp 0.501525883851622 0.745044854143828 0.3183271 0.44196483 prediction 0.487037940584412 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150471086 chr1:150471087 stopgain 0.466 1 22 hm5C_associated_SNPs_110185 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150471079-150471107
64251 chr11 85342819 85342819 1 + T C GBM 85342817 + 85342797 85342837 41 AGACCAATGGTCATAGAAATCATAGAAAAAAATTTTGACTA AGACCAATGGTCATAGAAATCACAGAAAAAAATTTTGACTA < 41bp 0.488471107635719 0.743507959679149 0.22560564 0.22367033 prediction 0.487015919358297 Functional Gain - TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85342817 chr11:85342819 nonsynonymous SNV 0.991 1 23 hm5C_associated_SNPs_110187 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:85342810-85342836
64251 chr19 41712941 41712941 1 + C A rs8192798 41712940 + 41712920 41712960 41 ACTCTCCCAGCCTGTGACCACCGATGTCCACACACCCCCAA ACTCTCCCAGCCTGTGACCACAGATGTCCACACACCCCCAA < 41bp 0.544107807933244 0.787611600351176 0.15070528 0.5883375 prediction 0.487007584835863 Functional Gain - CYP2S1 ENSG00000167600 UTR3 Human protein_coding chr19:41712940 chr19:41712941 . . 0 22 hm5C_associated_SNPs_110190 0 0 3 RBPMS POSTAR2 SRX484628 chr19:41712940-41712960
64251 chr14 64896929 64896929 1 + A G CESC 64896926 + 64896906 64896946 41 CGCTGCAGGAGGCGGCTACTCCCAGGTCATTCCTATGGAAG CGCTGCAGGAGGCGGCTACTCCCGGGTCATTCCTATGGAAG < 41bp 0.519312981417977 0.762798345668134 0.29461795 0.89379776 prediction 0.486970728500314 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64896926 chr14:64896929 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_110195 0 0 2 BUD13 POSTAR2 ENCODE chr14:64896886-64896939
64251 chr9 102730826 102730826 1 + T A CESC 102730822 + 102730802 102730842 41 CTTCAAAGTGGCAGGAATTGCAGCTGCACTTGGTGGTGGGG CTTCAAAGTGGCAGGAATTGCAGCAGCACTTGGTGGTGGGG < 41bp 0.607426937298159 0.850903321238369 0.81797206 0.8412952 prediction 0.486952767880419 Functional Gain - STX17 ENSG00000136874 CDS Human protein_coding chr9:102730822 chr9:102730826 synonymous SNV . 0 25 hm5C_associated_SNPs_110197 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:102730815-102730844
64251 chr3 38042986 38042986 1 + C T CESC 38042985 + 38042965 38043005 41 TTACACAGGCAGCCCGTGGACCCCAAGCGTCATGGACAGCT TTACACAGGCAGCCCGTGGACTCCAAGCGTCATGGACAGCT < 41bp 0.568216866242286 0.811689183618835 0.07245475 0.9357194 prediction 0.486944634753097 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38042985 chr3:38042986 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_110198 0 0 1 BUD13 POSTAR2 ENCODE chr3:38042889-38042999
64251 chr10 98742370 98742370 1 + T C COAD 98742368 + 98742348 98742388 41 CCAATGGGCTTGGAGCCCCCCATGAGTCTGGGAAAGGCTGA CCAATGGGCTTGGAGCCCCCCACGAGTCTGGGAAAGGCTGA < 41bp 0.53171685858309 0.775173113039065 0.1038388 0.22224689 prediction 0.486912508911949 Functional Gain - LCOR ENSG00000155640 CDS Human other chr10:98742368 chr10:98742370 nonsynonymous SNV 0.010 0 23 hm5C_associated_SNPs_110202 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:98742343-98742371
64251 chr12 51090954 51090954 1 + C T UCEC 51090953 + 51090933 51090973 41 GAAGCCATGACTGTAGCAATCCGCAGGTACTGTTCAGGATG GAAGCCATGACTGTAGCAATCTGCAGGTACTGTTCAGGATG < 41bp 0.516063493828584 0.759514440368967 0.3622765 0.25793225 prediction 0.486901893080765 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51090953 chr12:51090954 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_110203 0 0 2 FMR1 POSTAR2 ENCODE chr12:51090899-51090956
64251 chr2 177016766 177016766 1 + C A ACC 177016765 + 177016745 177016785 41 GCAGCCGGCCGTGGTCTACCCCTGGATGAAGAAGGTGCACG GCAGCCGGCCGTGGTCTACCCATGGATGAAGAAGGTGCACG < 41bp 0.492888946136931 0.743414923721093 0.27713075 0.5814607 prediction 0.486829847442187 Functional Gain - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016765 chr2:177016766 synonymous SNV . 0 22 hm5C_associated_SNPs_110212 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:177016743-177016768
64251 chr13 115089704 115089704 1 + C A COAD 115089700 + 115089680 115089720 41 AGCAGAACCAAAATCCATACCTGCCCTTTCAATGGAAACAC AGCAGAACCAAAATCCATACCTGCACTTTCAATGGAAACAC < 41bp 0.333218587108498 0.743410729447884 0.031983823 0.068397105 prediction 0.486821458895768 Functional Gain - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115089700 chr13:115089704 synonymous SNV . 0 25 hm5C_associated_SNPs_110214 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:115089662-115089713
64251 chr2 10925104 10925104 1 - G A SKCM 10925105 - 10925085 10925125 41 CCTGTAGGAGGCGGGGCTTTCCCTACCATCGTTGAGAGAGA CCTGTAGGAGGCGGGGCTTTCTCTACCATCGTTGAGAGAGA < 41bp 0.559893088337773 0.803296483990178 0.33173382 0.91004837 prediction 0.48680679130481 Functional Gain - PDIA6 ENSG00000143870 CDS Human protein_coding chr2:10925105 chr2:10925104 nonsynonymous SNV 0.144 2 22 hm5C_associated_SNPs_110215 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:10925076-10925104
64251 chrX 65412069 65412069 1 + T C STAD 65412067 + 65412047 65412087 41 GACAGTACTTCATTGAGGCCCATGAGATTCAATGGGACTAT GACAGTACTTCATTGAGGCCCACGAGATTCAATGGGACTAT < 41bp 0.468198593720737 0.743396490553206 0.2420372 0.19400606 prediction 0.486792981106411 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65412067 chrX:65412069 synonymous SNV . 0 23 hm5C_associated_SNPs_110217 0 0 2 LIN28B POSTAR2 ENCODE chrX:65412062-65412132
64251 chr1 214171089 214171089 1 + C A LUAD 214171085 + 214171065 214171105 41 ATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTG ATGGGGAAAACCACAATTTCCACAACGCCAACCAGCGCCTG < 41bp 0.337391224388532 0.743386864744259 0.022664785 0.04320994 prediction 0.486773729488519 Functional Gain - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171085 chr1:214171089 nonsynonymous SNV 0.984 2 25 hm5C_associated_SNPs_110218 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:214171070-214171091
64251 chr3 160951194 160951194 1 + T A LUAD 160951190 + 160951170 160951210 41 TTTGTGTTTTATTGAAGGTACGGCTTGTAGATGCAGGCTTT TTTGTGTTTTATTGAAGGTACGGCATGTAGATGCAGGCTTT < 41bp 0.421380058982351 0.743384931900813 0.035586685 0.08710581 prediction 0.486769863801627 Functional Gain - NMD3 ENSG00000169251 CDS Human protein_coding chr3:160951190 chr3:160951194 nonsynonymous SNV 0.981 4 25 hm5C_associated_SNPs_110219 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr3:160951151-160951199
64251 chr4 74316375 74316375 1 + T C UCEC 74316373 + 74316353 74316393 41 GAAAGCCCCCCAGCTGACCTCGTCGGAGCTGATGGCCATCA GAAAGCCCCCCAGCTGACCTCGCCGGAGCTGATGGCCATCA < 41bp 0.57751580814838 0.820897281113298 0.43909734 0.5505839 prediction 0.486762945929837 Functional Gain - AFP ENSG00000081051 CDS Human protein_coding chr4:74316373 chr4:74316375 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_110220 0 0 6 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr4:74316368-74316395
64251 chr20 32211096 32211096 1 + C A OV 32211095 + 32211075 32211115 41 GAAATGGGAAGAGGCCCAGTCCAGAGAGGTGAGCAGATGAG GAAATGGGAAGAGGCCCAGTCAAGAGAGGTGAGCAGATGAG < 41bp 0.523316239720651 0.766691176878691 0.28964335 0.40646988 prediction 0.48674987431608 Functional Gain - CBFA2T2 ENSG00000078699 CDS Human protein_coding chr20:32211095 chr20:32211096 nonsynonymous SNV 0.840 4 22 hm5C_associated_SNPs_110222 0 0 8 BUD13 POSTAR2 ENCODE chr20:32211036-32211162
64251 chr7 7613368 7613368 1 + C T HNSC 7613367 + 7613347 7613387 41 TTTTAGCTGGAAATGAAGATCCACAGCTCAAGTCACTCTGG TTTTAGCTGGAAATGAAGATCTACAGCTCAAGTCACTCTGG < 41bp 0.516205856527714 0.759578089095417 0.044009835 0.17905003 prediction 0.486744465135406 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7613367 chr7:7613368 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_110223 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:7613357-7613384
64251 chr12 56075840 56075840 1 + C T rs74421938 56075839 + 56075819 56075859 41 TCACCTGCCTAGACCCAAATCCCCACTTTGAGAAGTTCCTG TCACCTGCCTAGACCCAAATCTCCACTTTGAGAAGTTCCTG < 41bp 0.524542714518519 0.76788561378094 0.035476178 0.8186977 prediction 0.486685798524842 Functional Gain - METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075839 chr12:56075840 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_110228 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr12:56075825-56075848
64251 chr15 68379020 68379020 1 + C T COAD 68379019 + 68378999 68379039 41 CAGCTCTTCACCCAGTCCATCCGGATATAAAACTTCAAAAA CAGCTCTTCACCCAGTCCATCTGGATATAAAACTTCAAAAA < 41bp 0.506779429535264 0.750111702820984 0.18175036 0.11949116 prediction 0.486664546571442 Functional Gain - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68379019 chr15:68379020 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_110230 0 0 14 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr15:68378974-68379039
64251 chr7 6617247 6617247 1 + C G rs11559147 6617243 + 6617223 6617263 41 CCGCCGTCCCACCCCCACCTCGCCCGAGTCCGGGGCGGCCC CCGCCGTCCCACCCCCACCTCGCCGGAGTCCGGGGCGGCCC < 41bp 0.539305387231651 0.782632713014991 0.076556295 0.362259 prediction 0.486654651566681 Functional Gain - ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617243 chr7:6617247 . . 0 25 hm5C_associated_SNPs_110232 0 0 2 DDX3X POSTAR2 ENCODE chr7:6617212-6617314
64251 chr19 16976300 16976300 1 + C T STAD 16976299 + 16976279 16976319 41 AGAAGCTATCTCGGATGGCGCCGGAAGACCAGGAGAAGTTC AGAAGCTATCTCGGATGGCGCTGGAAGACCAGGAGAAGTTC < 41bp 0.531700697765552 0.775024770512517 0.8271573 0.53288466 prediction 0.48664814549393 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16976299 chr19:16976300 nonsynonymous SNV 0.647 1 22 hm5C_associated_SNPs_110233 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:16976300-16976320
64251 chr16 2577964 2577964 1 + C A UCEC 2577960 + 2577940 2577980 41 CGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGT CGAAGTGATCCGGGCGCTGACGGCACGTGGCATCTGCGTGT < 41bp 0.683538728260431 0.926836122222697 0.7541293 0.88350797 prediction 0.48659478792453 Functional Gain - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2577960 chr16:2577964 synonymous SNV . 0 25 hm5C_associated_SNPs_110236 0 0 2 PPIG POSTAR2 ENCODE chr16:2577962-2577985
64251 chr20 13055049 13055049 1 + C A UCEC 13055045 + 13055025 13055065 41 ATCAACATGGGCTCCTATAACTTCCTTGGTCTTGCAGCCAA ATCAACATGGGCTCCTATAACTTCATTGGTCTTGCAGCCAA < 41bp 0.310595423085051 0.743296487020786 0.18929851 0.34055126 prediction 0.486592974041572 Functional Gain - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13055045 chr20:13055049 nonsynonymous SNV 0.892 5 25 hm5C_associated_SNPs_110237 0 0 1 GRWD1 POSTAR2 ENCODE chr20:13055048-13055146
64251 chr17 78079597 78079597 1 + A G rs1042393 78079594 + 78079574 78079614 41 CGAGGTGCCCTTGGAGACCCCGCATGTCCACAGCCGGGCAC CGAGGTGCCCTTGGAGACCCCGCGTGTCCACAGCCGGGCAC < 41bp 0.521478864909387 0.764770006676771 0.050026804 0.1933825 prediction 0.486582283534768 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78079594 chr17:78079597 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_110240 2 0 3 PCBP2 POSTAR2 ENCODE chr17:78079546-78079642
64251 chr16 10855263 10855263 1 + C T GBM 10855262 + 10855242 10855282 41 CGGAAAGAAATCAACTTCTGCCGCAAGGTGAAGCTGCCCAT CGGAAAGAAATCAACTTCTGCTGCAAGGTGAAGCTGCCCAT < 41bp 0.547168651998838 0.790443243884923 0.48260346 0.4289102 prediction 0.486549183772172 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10855262 chr16:10855263 nonsynonymous SNV 0.975 2 22 hm5C_associated_SNPs_110242 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:10855245-10855283
64251 chrX 117526915 117526915 1 + T G SKCM 117526913 + 117526893 117526933 41 CAACTGAGCAGCTTAATGTGCTTGAAACTGAAACAGAAGTA CAACTGAGCAGCTTAATGTGCTGGAAACTGAAACAGAAGTA < 41bp 0.426365742643395 0.743263030766103 0.07868782 0.24602732 prediction 0.486526061532207 Functional Gain - WDR44 ENSG00000131725 CDS Human protein_coding chrX:117526913 chrX:117526915 synonymous SNV . 0 23 hm5C_associated_SNPs_110245 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:117526891-117526931
64251 chr6 41889240 41889240 1 + C A rs61736990 41889236 + 41889216 41889256 41 GGCGCTGGGAGTCCACCGCGCAAGCGCATCCTGGCCTTTCT GGCGCTGGGAGTCCACCGCGCAAGAGCATCCTGGCCTTTCT < 41bp 0.590839478320273 0.834100390350916 0.51895565 0.40833098 prediction 0.486521824061286 Functional Gain - BYSL ENSG00000112578 UTR5 Human protein_coding chr6:41889236 chr6:41889240 . . 0 25 hm5C_associated_SNPs_110246 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr6:41889239-41889282
64251 chr1 231488784 231488784 1 + T C COAD 231488782 + 231488762 231488802 41 TAAGATATCCCTAAGAAATTCTTCAAAAGTAACGGAATCAG TAAGATATCCCTAAGAAATTCTCCAAAAGTAACGGAATCAG < 41bp 0.539092701759568 0.782332303955089 0.073313266 0.96069646 prediction 0.486479204391042 Functional Gain - SPRTN ENSG00000010072 CDS Human protein_coding chr1:231488782 chr1:231488784 nonsynonymous SNV 0.213 0 23 hm5C_associated_SNPs_110249 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:231488766-231488821
64251 chr20 19955331 19955331 1 + C A rs371812021 19955330 + 19955310 19955350 41 CCCCAGCTGACAGCAAACCCCCGAACCTTCCACCTCCCCAT CCCCAGCTGACAGCAAACCCCAGAACCTTCCACCTCCCCAT < 41bp 0.479778692365443 0.743237791248154 0.15308917 0.2702029 prediction 0.486475582496308 Functional Gain - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19955330 chr20:19955331 nonsynonymous SNV 0.937 1 22 hm5C_associated_SNPs_110250 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:19955331-19955332
64251 chr20 43559364 43559364 1 + C G LGG 43559363 + 43559343 43559383 41 CTACTTCCTGCCTGCCATGCCCCAGGTGACGGCCTGCCCGC CTACTTCCTGCCTGCCATGCCGCAGGTGACGGCCTGCCCGC < 41bp 0.622023546696994 0.865261212646443 0.040914953 0.12440166 prediction 0.486475331898897 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43559363 chr20:43559364 synonymous SNV . 0 22 hm5C_associated_SNPs_110251 0 0 8 GRWD1 POSTAR2 ENCODE chr20:43559343-43559374
64251 chr3 9787362 9787362 1 + C T SKCM 9787361 + 9787341 9787381 41 CACTGAGAATGAGGCCTACTCCGTGGGCACTGGCCGCGGCG CACTGAGAATGAGGCCTACTCTGTGGGCACTGGCCGCGGCG < 41bp 0.498611008010898 0.743230141575696 0.8397954 0.7211276 prediction 0.486460283151392 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9787361 chr3:9787362 synonymous SNV . 0 22 hm5C_associated_SNPs_110255 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:9787346-9787366
64251 chr14 105927123 105927123 1 + C T SKCM 105927122 + 105927102 105927142 41 TTCCACGCCATGGATACTCTCCACAAGAACATCTACGACAT TTCCACGCCATGGATACTCTCTACAAGAACATCTACGACAT < 41bp 0.562483503580617 0.805712149689879 0.049101025 0.6969 prediction 0.486457292218525 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105927122 chr14:105927123 nonsynonymous SNV 0.061 1 22 hm5C_associated_SNPs_110256 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:105927100-105927124
64251 chr12 56626573 56626573 1 + C A rs76909887 56626572 + 56626552 56626592 41 TCAAAGGCCCCTCACCTACCCCGTGGGCCAGCCCCCTCGGG TCAAAGGCCCCTCACCTACCCAGTGGGCCAGCCCCCTCGGG < 41bp 0.47499981338696 0.74321829554894 0.38396502 0.8772618 prediction 0.486436591097879 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56626572 chr12:56626573 nonsynonymous SNV 0.593 0 22 hm5C_associated_SNPs_110257 0 0 2 PPIG POSTAR2 ENCODE chr12:56626569-56626581
64251 chr4 79472945 79472945 1 + C G rs143738600 79472941 + 79472921 79472961 41 GCCAGCGCGGAGCACCTGCGCCCGCGGCTGACACCTTCGCT GCCAGCGCGGAGCACCTGCGCCCGGGGCTGACACCTTCGCT < 41bp 0.502257972106719 0.7454752447453 0.37929714 0.3940174 prediction 0.486434545277162 Functional Gain - ANXA3 ENSG00000138772 UTR5 Human protein_coding chr4:79472941 chr4:79472945 . . 0 25 hm5C_associated_SNPs_110258 0 0 1 DDX3X POSTAR2 ENCODE chr4:79472895-79472963
64251 chr8 126017790 126017790 1 + C G SKCM 126017789 + 126017769 126017809 41 ACAGTGGAAGGTCTTGATGCCCAGGTTGTAAATGGTTACAT ACAGTGGAAGGTCTTGATGCCGAGGTTGTAAATGGTTACAT < 41bp 0.425781349162332 0.743216882794125 0.029209554 0.29146144 prediction 0.486433765588251 Functional Gain - SQLE ENSG00000104549 CDS Human protein_coding chr8:126017789 chr8:126017790 nonsynonymous SNV 0.853 1 22 hm5C_associated_SNPs_110259 0 0 7 AARS POSTAR2 ENCODE chr8:126017749-126017794
64251 chr11 10508883 10508883 1 + C T SKCM 10508882 + 10508862 10508902 41 TCAAAGAGTTGAAGAGTAACCCCCACCGGGACTTCTATAAC TCAAAGAGTTGAAGAGTAACCTCCACCGGGACTTCTATAAC < 41bp 0.468465128211016 0.743200572122816 0.0503729 0.9140746 prediction 0.486401144245631 Functional Gain - AMPD3 ENSG00000133805 CDS Human protein_coding chr11:10508882 chr11:10508883 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_110264 0 0 2 DDX24 POSTAR2 ENCODE chr11:10508860-10508912
64251 chr19 1254389 1254389 1 + C G rs373111260 1254388 + 1254368 1254408 41 CCAGTGCCGCCCGAGTCCCCCCGGTGCCCACCAGCCCGTCC CCAGTGCCGCCCGAGTCCCCCGGGTGCCCACCAGCCCGTCC < 41bp 0.622646092399863 0.865846465260517 0.48646328 0.9240083 prediction 0.486400745721308 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254388 chr19:1254389 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_110265 0 0 1 FXR2 POSTAR2 ENCODE chr19:1254374-1254409
64251 chr1 44442875 44442875 1 + T C COAD 44442873 + 44442853 44442893 41 ATTGGCCTCTTTGGGGTCATCGTCGCAATTCTTCAGGTGAT ATTGGCCTCTTTGGGGTCATCGCCGCAATTCTTCAGGTGAT < 41bp 0.544907641486324 0.788102806177306 0.5289339 0.66873735 prediction 0.486390329381964 Functional Gain - ATP6V0B ENSG00000117410 CDS Human protein_coding chr1:44442873 chr1:44442875 nonsynonymous SNV 0.996 3 23 hm5C_associated_SNPs_110266 0 0 24 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:44442820-44442879
64251 chr11 8009075 8009075 1 + C A UCEC 8009074 + 8009054 8009094 41 CAGCGGCTGCAACTGCGGCTCCTGGCCAGACCCCGGCCTCA CAGCGGCTGCAACTGCGGCTCATGGCCAGACCCCGGCCTCA < 41bp 0.519685928070804 0.762878277720213 0.07655293 0.12550959 prediction 0.486384699298817 Functional Gain - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8009074 chr11:8009075 nonsynonymous SNV 0.696 1 22 hm5C_associated_SNPs_110267 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8008991-8009079
64251 chr22 44565012 44565012 1 + C G rs181809005 44565011 + 44564991 44565031 41 GAACGCCGGCTCCCCGAGGACCCAGGCTTGACGATTCACCG GAACGCCGGCTCCCCGAGGACGCAGGCTTGACGATTCACCG < 41bp 0.480522243508042 0.743190549640444 0.44503087 0.57635576 prediction 0.486381099280889 Functional Gain - PARVB ENSG00000188677 UTR3 Human protein_coding chr22:44565011 chr22:44565012 . . 0 22 hm5C_associated_SNPs_110268 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:44565006-44565034
64251 chr19 36133394 36133394 1 + C A LUSC 36133393 + 36133373 36133413 41 GGAACTGGGATGAGGCATCCCCACAGGAAGTGCCTCCAGGG GGAACTGGGATGAGGCATCCCAACAGGAAGTGCCTCCAGGG < 41bp 0.526901047785988 0.770073088213413 0.047857046 0.17785645 prediction 0.48634408085485 Functional Gain - ETV2 ENSG00000105672 CDS Human protein_coding chr19:36133393 chr19:36133394 nonsynonymous SNV 0.779 2 22 hm5C_associated_SNPs_110271 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36133362-36133396
64251 chr12 123067352 123067352 1 + C G LUSC 123067348 + 123067328 123067368 41 TTAAAGCTCACGAAGTTGCACAGGCGAAACACAAACCTGGG TTAAAGCTCACGAAGTTGCACAGGGGAAACACAAACCTGGG < 41bp 0.470727051415381 0.74314802518067 0.5942456 0.8001923 prediction 0.486296050361339 Functional Gain - KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123067348 chr12:123067352 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_110274 0 0 2 FASTKD2 POSTAR2 ENCODE chr12:123067274-123067379
64251 chr11 396831 396831 1 + C A LUAD 396830 + 396810 396850 41 ACAGGGCTTCCGGCCCATCGCCAAGCCGGCCTACAGCCCAG ACAGGGCTTCCGGCCCATCGCAAAGCCGGCCTACAGCCCAG < 41bp 0.524385637443445 0.767523412875445 0.9232346 0.87398213 prediction 0.486275550864 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:396830 chr11:396831 synonymous SNV . 0 22 hm5C_associated_SNPs_110275 0 0 1 YBX3 POSTAR2 ENCODE chr11:396821-396853
64251 chr2 237994575 237994575 1 + C A rs62621255 237994571 + 237994551 237994591 41 AGGGACAGTCTGGGGTTTGGCTGTCCGGACGGTGCAGCGGC AGGGACAGTCTGGGGTTTGGCTGTACGGACGGTGCAGCGGC < 41bp 0.621620642315469 0.864710501544407 0.25357002 0.34563988 prediction 0.486179718457876 Functional Gain - COPS8 ENSG00000198612 UTR5 Human protein_coding chr2:237994571 chr2:237994575 . . 0 25 hm5C_associated_SNPs_110286 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:237994540-237994600
64251 chr2 174230244 174230244 1 + C A UCEC 174230240 + 174230220 174230260 41 TGACCCTTCCGCATATAATTCGCCCAGTGGAAGAAATTACA TGACCCTTCCGCATATAATTCGCCAAGTGGAAGAAATTACA < 41bp 0.304026663579451 0.743087257734108 0.13994545 0.44807675 prediction 0.486174515468216 Functional Gain - CDCA7 ENSG00000144354 CDS Human protein_coding chr2:174230240 chr2:174230244 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_110287 0 0 11 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:174230220-174230260
64251 chr1 173703092 173703092 1 + C A ESCA 173703088 + 173703068 173703108 41 TGCCCATCGAGTCATTTTGTCAGCCTGTAGTCCCTACTTCC TGCCCATCGAGTCATTTTGTCAGCATGTAGTCCCTACTTCC < 41bp 0.333387514025518 0.743080739188332 0.33645272 0.20480946 prediction 0.486161478376664 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173703088 chr1:173703092 synonymous SNV . 0 25 hm5C_associated_SNPs_110288 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:173703066-173703102
64251 chr7 99654906 99654906 1 + T G SKCM 99654903 + 99654883 99654923 41 TGGAGCTACTGGTGCTGGAGCAGTTCCTGACCATCCTGCCC TGGAGCTACTGGTGCTGGAGCAGGTCCTGACCATCCTGCCC < 41bp 0.333363522894534 0.743063852795544 0.5084771 0.783335 prediction 0.486127705591087 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99654903 chr7:99654906 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_110292 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:99654877-99654915
64251 chrX 153628249 153628249 1 + T C COAD 153628247 + 153628227 153628267 41 CACCCCTTCCACGTCATCCGCATCAACAAGATGTTGTCCTG CACCCCTTCCACGTCATCCGCACCAACAAGATGTTGTCCTG < 41bp 0.460247289994313 0.743057985671473 0.14995235 0.17342389 prediction 0.486115971342945 Functional Gain - RPL10 ENSG00000147403 CDS Human protein_coding chrX:153628247 chrX:153628249 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_110294 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153628209-153628278
64251 chr11 118506246 118506246 1 + C G UCS 118506245 + 118506225 118506265 41 CGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCCAAGAGGAA CGGAGCAAGGCTGAGCTGCTCGGCAGCATCGCCAAGAGGAA < 41bp 0.607714158113577 0.850756575781759 0.16998145 0.82823634 prediction 0.486084835336365 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118506245 chr11:118506246 nonsynonymous SNV 0.780 3 22 hm5C_associated_SNPs_110296 0 0 4 BUD13 POSTAR2 ENCODE chr11:118506198-118506282
64251 chrX 100667389 100667389 1 + C G LUAD 100667388 + 100667368 100667408 41 TTTCAGGGTTGGAAATTGTGCCAAATGGGATGACACTGCCA TTTCAGGGTTGGAAATTGTGCGAAATGGGATGACACTGCCA < 41bp 0.611125824759083 0.854167346767078 0.16137213 0.20393729 prediction 0.486083044015992 Functional Gain - HNRNPH2 ENSG00000126945 CDS Human protein_coding chrX:100667388 chrX:100667389 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110297 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chrX:100667369-100667399
64251 chr10 96066280 96066280 1 + C T SKCM 96066279 + 96066259 96066299 41 CCTCTGGACAGCTGCCATTTCCGCACAAAGCCCATCCATCG CCTCTGGACAGCTGCCATTTCTGCACAAAGCCCATCCATCG < 41bp 0.48926181111481 0.74302165824699 0.05944276 0.06690326 prediction 0.486043316493979 Functional Gain - PLCE1 ENSG00000138193 CDS Human protein_coding chr10:96066279 chr10:96066280 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_110300 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:96066259-96066297
64251 chr19 17430906 17430906 1 + C A rs73014492 17430905 + 17430885 17430925 41 AGCCGAGTGGCCTTCTCCCCCCCAACACCGGTCCAGGCCAT AGCCGAGTGGCCTTCTCCCCCACAACACCGGTCCAGGCCAT < 41bp 0.541135001386172 0.784156352172229 0.5708971 0.44282746 prediction 0.486042701572115 Functional Gain - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17430905 chr19:17430906 . . 0 22 hm5C_associated_SNPs_110301 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17430868-17430913
64251 chr1 109234984 109234984 1 + C G rs531844717 109234980 + 109234960 109235000 41 GAGATCGAGCTCCCTGGCTGCCGGCTCGCCTTCTGCGTGGA GAGATCGAGCTCCCTGGCTGCCGGGTCGCCTTCTGCGTGGA < 41bp 0.462024463921476 0.743019071503312 0.37836266 0.8554481 prediction 0.486038143006625 Functional Gain - PRPF38B ENSG00000134186 UTR5 Human protein_coding chr1:109234980 chr1:109234984 . . 0 25 hm5C_associated_SNPs_110303 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:109234966-109234994
64251 chr18 47919736 47919736 1 + C A rs10164137 47919732 + 47919712 47919752 41 TGATATTGGAAGAAAAAGATCAAGCTGATGAGGTTAGGATA TGATATTGGAAGAAAAAGATCAAGATGATGAGGTTAGGATA < 41bp 0.39220111044273 0.743011946601863 0.89511704 0.9169133 prediction 0.486023893203727 Functional Gain - SKA1 ENSG00000154839 UTR3 Human protein_coding chr18:47919732 chr18:47919736 . . 0 25 hm5C_associated_SNPs_110304 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr18:47919717-47919770
64251 chr10 101567195 101567195 1 + C T CESC 101567194 + 101567174 101567214 41 AGAGACCAAGTACAAAACCTCCGGAAGAAAGAGCTCAAGAA AGAGACCAAGTACAAAACCTCTGGAAGAAAGAGCTCAAGAA < 41bp 0.48796639694374 0.743006150449542 0.88662815 0.87548864 prediction 0.486012300899084 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101567194 chr10:101567195 nonsynonymous SNV 0.509 5 22 hm5C_associated_SNPs_110307 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr10:101567180-101567220
64251 chr17 42267939 42267939 1 + C A LUSC 42267938 + 42267918 42267958 41 CGCCTGCTACAAGACCCAGCCCGCACACTGCGTTCTCTGAA CGCCTGCTACAAGACCCAGCCAGCACACTGCGTTCTCTGAA < 41bp 0.509044642366583 0.752049522699168 0.016364545 0.044715255 prediction 0.48600976066517 Functional Gain - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42267938 chr17:42267939 nonsynonymous SNV 0.971 0 22 hm5C_associated_SNPs_110309 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:42267934-42267949
64251 chr12 56075915 56075915 1 + C A rs75289684 56075914 + 56075894 56075934 41 ATGAGCGGTTTGTGGTGGCTCCTGGAGAGGACATGAGACAG ATGAGCGGTTTGTGGTGGCTCATGGAGAGGACATGAGACAG < 41bp 0.488376310704456 0.743004349675083 0.13730916 0.24352309 prediction 0.486008699350167 Functional Gain - METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075914 chr12:56075915 nonsynonymous SNV 0.306 0 22 hm5C_associated_SNPs_110310 0 0 2 SND1 POSTAR2 ENCODE chr12:56075898-56076026
64251 chr19 41822684 41822684 1 + C T SKCM 41822683 + 41822663 41822703 41 CGGCAGGGCACTGCCCGGCCCCGCACCCTGCGTACCCGCCT CGGCAGGGCACTGCCCGGCCCTGCACCCTGCGTACCCGCCT < 41bp 0.511108058500122 0.754084295858652 0.10679084 0.12652397 prediction 0.48595247471706 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822683 chr19:41822684 nonsynonymous SNV 0.979 3 22 hm5C_associated_SNPs_110321 0 0 1 RBM15 POSTAR2 ENCODE chr19:41822577-41822696
64251 chr2 192257883 192257883 1 + C T STAD 192257882 + 192257862 192257902 41 ATATATCGGGGGTGGAAATGCCGCACACACTTCCTGCTAAT ATATATCGGGGGTGGAAATGCTGCACACACTTCCTGCTAAT < 41bp 0.546140492074093 0.789111351847134 0.062868685 0.024699956 prediction 0.485941719546082 Functional Gain - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192257882 chr2:192257883 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_110325 0 0 1 GRWD1 POSTAR2 ENCODE chr2:192257874-192257912
64251 chr19 49671939 49671939 1 + C T SKCM 49671938 + 49671918 49671958 41 GGCTGCCTGGGGGGCGAGAACCGCTTCCGCTTGCGCCTGGA GGCTGCCTGGGGGGCGAGAACTGCTTCCGCTTGCGCCTGGA < 41bp 0.510625084096756 0.7535813775944 0.77972484 0.72995716 prediction 0.485912586995288 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671938 chr19:49671939 nonsynonymous SNV 0.992 2 22 hm5C_associated_SNPs_110326 0 0 1 SUB1 POSTAR2 ENCODE chr19:49671918-49671996
64251 chr19 1430258 1430258 1 + C T SKCM 1430257 + 1430237 1430277 41 CCCTGCAGGAAGAGGAGCCCCCCCGCCACCCCCACCGTTCA CCCTGCAGGAAGAGGAGCCCCTCCGCCACCCCCACCGTTCA < 41bp 0.479004583032264 0.742947753084945 0.08855167 0.13863304 prediction 0.48589550616989 Functional Gain - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1430257 chr19:1430258 synonymous SNV . 0 22 hm5C_associated_SNPs_110330 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:1430240-1430260
64251 chr20 3016353 3016353 1 + C T SARC 3016352 + 3016332 3016372 41 AGACCTCCTGGTCACCAACACCAGGGTAAGATGGGTCGTGG AGACCTCCTGGTCACCAACACTAGGGTAAGATGGGTCGTGG < 41bp 0.5105111869436 0.753455229867738 0.8821282 0.44834816 prediction 0.485888085848276 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3016352 chr20:3016353 synonymous SNV . 0 22 hm5C_associated_SNPs_110334 0 0 1 PPIG POSTAR2 ENCODE chr20:3016293-3016355
64251 chr4 88035965 88035965 1 + C A rs116543050 88035964 + 88035944 88035984 41 GACGAAAGGACGGCCCCGGGCCGCAGCAAGCAACGAACCCA GACGAAAGGACGGCCCCGGGCAGCAGCAAGCAACGAACCCA < 41bp 0.495624137709117 0.742933922535213 0.13817522 0.2302309 prediction 0.485867845070427 Functional Gain - AFF1 ENSG00000172493 CDS Human protein_coding chr4:88035964 chr4:88035965 synonymous SNV . 0 22 hm5C_associated_SNPs_110336 0 0 1 U2AF1 POSTAR2 ENCODE chr4:88035958-88036123
64251 chr12 121659960 121659960 1 + C T SKCM 121659959 + 121659939 121659979 41 ACTGCCGGCTCTGCCGGCACCCACAGCAACGGTACGAGCTT ACTGCCGGCTCTGCCGGCACCTACAGCAACGGTACGAGCTT < 41bp 0.525284990931656 0.768214711699319 0.100238055 0.8882847 prediction 0.485859441535326 Functional Gain - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121659959 chr12:121659960 nonsynonymous SNV 0.633 1 22 hm5C_associated_SNPs_110339 0 0 1 PRPF8 POSTAR2 ENCODE chr12:121659889-121660036
64251 chr11 118245939 118245939 1 + T C COAD 118245937 + 118245917 118245957 41 CGAAAAATTAAAAATGTACACATGAGAGGTAGGAGAGAACC CGAAAAATTAAAAATGTACACACGAGAGGTAGGAGAGAACC < 41bp 0.572854253039912 0.815777833890352 0.28488082 0.13725579 prediction 0.48584716170088 Functional Gain - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118245937 chr11:118245939 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_110340 0 0 1 UPF1 POSTAR2 ENCODE chr11:118245922-118245945
64251 chr10 5956205 5956205 1 + C T HNSC 5956204 + 5956184 5956224 41 AATCACAAGATGGAACCTCTCCAGGTGGTGAAAATTATGGC AATCACAAGATGGAACCTCTCTAGGTGGTGAAAATTATGGC < 41bp 0.492299860750757 0.742922959910244 0.85408413 0.46311095 prediction 0.485845919820488 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5956204 chr10:5956205 stopgain 0.999 1 22 hm5C_associated_SNPs_110341 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:5956178-5956215
64251 chr16 70503181 70503181 1 + C G SKCM 70503180 + 70503160 70503200 41 GCGGGTTATCTGCAGAGCGCCCGGGCCCAGCTGTGGAGGGA GCGGGTTATCTGCAGAGCGCCGGGGCCCAGCTGTGGAGGGA < 41bp 0.426766052931847 0.742921413194954 0.4484426 0.79745996 prediction 0.485842826389909 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70503180 chr16:70503181 nonsynonymous SNV 0.974 4 22 hm5C_associated_SNPs_110342 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:70503165-70503192
64251 chr2 102476220 102476220 1 + C T rs61741751 102476219 + 102476199 102476239 41 ATGACCATAGGAGGCCGCACCCGCAGCACTCGCAGCAGCCG ATGACCATAGGAGGCCGCACCTGCAGCACTCGCAGCAGCCG < 41bp 0.489381989366208 0.742904109922965 0.14209092 0.1240744 prediction 0.48580821984593 Functional Gain - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102476219 chr2:102476220 nonsynonymous SNV 0.987 0 22 hm5C_associated_SNPs_110345 0 0 9 DDX24 POSTAR2 ENCODE chr2:102476195-102476264
64251 chr17 40174529 40174529 1 + C T COAD 40174528 + 40174508 40174548 41 CCGGGGGCTCCGAGATGGGGCCGAACTGCCCCGACACTGCT CCGGGGGCTCCGAGATGGGGCTGAACTGCCCCGACACTGCT < 41bp 0.510276604580103 0.753159698340661 0.10990435 0.19758996 prediction 0.485766187521114 Functional Gain - NKIRAS2 ENSG00000168256 CDS Human protein_coding chr17:40174528 chr17:40174529 synonymous SNV . 0 22 hm5C_associated_SNPs_110352 0 0 3 PPIG POSTAR2 ENCODE chr17:40174429-40174537
64251 chr19 50881906 50881906 1 + C T rs117587314 50881905 + 50881885 50881925 41 AGCCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGGCAG AGCCTCTGGGCCTGGGGCTTCTCCTGGTGGATCTGAGGCAG < 41bp 0.510449215217488 0.753320645889396 0.32067293 0.45681733 prediction 0.485742861343816 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881905 chr19:50881906 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_110356 0 0 3 DDX24 POSTAR2 ENCODE chr19:50881880-50881924
64251 chr15 48063082 48063082 1 + T G LUSC 48063080 + 48063060 48063100 41 AGTTGGCTGCTCTTCCTACTCCTGAGTCTACACCCGTGCTT AGTTGGCTGCTCTTCCTACTCCGGAGTCTACACCCGTGCTT < 41bp 0.621705005388262 0.864568382298624 0.3191893 0.91047406 prediction 0.485726753820724 Functional Gain - SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063080 chr15:48063082 synonymous SNV . 0 23 hm5C_associated_SNPs_110359 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:48063045-48063089
64251 chr6 36168566 36168566 1 + T C UCEC 36168564 + 36168544 36168584 41 GATGCAGAGGTAGAGTATGACATGGATGAGGAGGACCTTGC GATGCAGAGGTAGAGTATGACACGGATGAGGAGGACCTTGC < 41bp 0.565377752197199 0.808237000053645 0.67695 0.35942787 prediction 0.485718495712892 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36168564 chr6:36168566 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_110360 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:36168520-36168576
64251 chr8 128750684 128750684 1 + C T COAD 128750683 + 128750663 128750703 41 AATTCGAGCTGCTGCCCACCCCGCCCCTGTCCCCTAGCCGC AATTCGAGCTGCTGCCCACCCTGCCCCTGTCCCCTAGCCGC < 41bp 0.504858809301242 0.74771577739807 0.27000228 0.2812186 prediction 0.485713936193657 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128750683 chr8:128750684 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110361 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:128750650-128750684
64251 chr2 173352903 173352903 1 + C A KIRP 173352899 + 173352879 173352919 41 TTTGGAGGTACAGTTGTTGGCGAGCAAGCTATGAAATCTGA TTTGGAGGTACAGTTGTTGGCGAGAAAGCTATGAAATCTGA < 41bp 0.335904351385766 0.74284815363065 0.3965614 0.607529 prediction 0.485696307261301 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173352899 chr2:173352903 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_110363 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:173352900-173352948
64251 chr19 1430303 1430303 1 + T C rs113778676 1430301 + 1430281 1430321 41 CCTACATCGTGTCCACCCCTCCTGGAGGCTTTCCCCCTCCC CCTACATCGTGTCCACCCCTCCCGGAGGCTTTCCCCCTCCC < 41bp 0.53441896389571 0.77726490883355 0.2722767 0.44439837 prediction 0.48569188987568 Functional Gain - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1430301 chr19:1430303 synonymous SNV . 0 23 hm5C_associated_SNPs_110364 0 0 16 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:1430280-1430320
64251 chr3 100467254 100467254 1 + C A UCEC 100467253 + 100467233 100467273 41 CTGGGGCCTATCAACCAAGACCAGGTTTTACTTCACTTCCT CTGGGGCCTATCAACCAAGACAAGGTTTTACTTCACTTCCT < 41bp 0.516058596168416 0.758898648312148 0.375302 0.25776812 prediction 0.485680104287464 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100467253 chr3:100467254 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_110365 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:100467240-100467260
64251 chr19 58790359 58790359 1 + C A rs11666156 58790355 + 58790335 58790375 41 GCCGGTGCGGCCGCCATTGTCCGGCGTTCGGCGAGTCGGGT GCCGGTGCGGCCGCCATTGTCCGGAGTTCGGCGAGTCGGGT < 41bp 0.651547645879701 0.894381639344336 0.9123239 0.91418415 prediction 0.485667986929271 Functional Gain - ZNF8-ERVK3-1 ENSG00000083842;ENSG00000267216;ENSG00000273439 UTR5 Human other chr19:58790355 chr19:58790359 . . 0 25 hm5C_associated_SNPs_110367 0 0 9 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr19:58790340-58790380
64251 chr17 4846201 4846201 1 + C A rs138467394 4846200 + 4846180 4846220 41 ATTTATTGGGGAGAGAAGCTCCGAGTACCTGCGTGCCCTCT ATTTATTGGGGAGAGAAGCTCAGAGTACCTGCGTGCCCTCT < 41bp 0.553818105221434 0.796638837006602 0.87479186 0.934167 prediction 0.485641463570336 Functional Gain - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846200 chr17:4846201 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_110371 0 0 14 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:4846179-4846210
64251 chr3 158363985 158363985 1 + T C STAD 158363983 + 158363963 158364003 41 AAAGATGGAGTTGGTGCTGTCATGGATTCCATGGAACTAGA AAAGATGGAGTTGGTGCTGTCACGGATTCCATGGAACTAGA < 41bp 0.565324541705539 0.808143937310333 0.17047763 0.21415815 prediction 0.485638791209586 Functional Gain - GFM1 ENSG00000079257;ENSG00000168827 CDS Human other chr3:158363983 chr3:158363985 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_110372 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:158363957-158363993
64251 chr7 100731580 100731580 1 + A G rs80253622 100731577 + 100731557 100731597 41 CTCTCCCTGGAAGGGGCGATCGCACAGCGGCTCAGGCAGCT CTCTCCCTGGAAGGGGCGATCGCGCAGCGGCTCAGGCAGCT < 41bp 0.515976279894958 0.75879264003264 0.5827444 0.87442863 prediction 0.485632720275365 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731577 chr7:100731580 synonymous SNV . 0 24 hm5C_associated_SNPs_110374 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731557-100731580
64251 chr2 233324032 233324032 1 + T G rs114650033 233324030 + 233324010 233324050 41 CCTTCTTCCCTCCGCATCCCCTTCAGGGAGCAGGAGCCCAG CCTTCTTCCCTCCGCATCCCCTGCAGGGAGCAGGAGCCCAG < 41bp 0.619815988738864 0.862622012919675 0.15341896 0.39290774 prediction 0.485612048361621 Functional Gain - ALPI ENSG00000163295 UTR3 Human protein_coding chr2:233324030 chr2:233324032 . . 0 23 hm5C_associated_SNPs_110376 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:233324023-233324049
64251 chr19 42797368 42797368 1 + C A BLCA 42797367 + 42797347 42797387 41 GAGACCTGGACTCCCACGGCCCGGAGCAGCCCCCCACTGCC GAGACCTGGACTCCCACGGCCAGGAGCAGCCCCCCACTGCC < 41bp 0.523767086196885 0.766565467629652 0.28351256 0.8608388 prediction 0.485596762865533 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42797367 chr19:42797368 synonymous SNV . 0 22 hm5C_associated_SNPs_110378 0 0 1 PPIG POSTAR2 ENCODE chr19:42797355-42797437
64251 chr22 39883514 39883514 1 + C A rs148816423 39883513 + 39883493 39883533 41 CAGCTTTTTCTGGAACAATGCCCCGGTCACGCCCCAGGCCA CAGCTTTTTCTGGAACAATGCACCGGTCACGCCCCAGGCCA < 41bp 0.513996478535057 0.756790203847373 0.18786046 0.159937 prediction 0.485587450624633 Functional Gain - MGAT3 ENSG00000128268 CDS Human protein_coding chr22:39883513 chr22:39883514 synonymous SNV . 0 22 hm5C_associated_SNPs_110379 0 0 1 METAP2 POSTAR2 ENCODE chr22:39883488-39883589
64251 chrX 54578136 54578136 1 + C T SKCM 54578135 + 54578115 54578155 41 GAAGCTGGCAGACCCTGTGACCCCAGTGGAGACCATCCTGC GAAGCTGGCAGACCCTGTGACTCCAGTGGAGACCATCCTGC < 41bp 0.565102521762172 0.80789478553644 0.4629483 0.9430895 prediction 0.485584527548536 Functional Gain - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578135 chrX:54578136 synonymous SNV . 0 22 hm5C_associated_SNPs_110380 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:54578122-54578145
64251 chr9 117027709 117027709 1 + C A rs7048607 117027708 + 117027688 117027728 41 CCTTGTCTCTGCAGGGCATCCCGGGTCCCTCAGGCCCCCCA CCTTGTCTCTGCAGGGCATCCAGGGTCCCTCAGGCCCCCCA < 41bp 0.535559522930514 0.778344501306711 0.9229212 0.92407095 prediction 0.485569956752394 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117027708 chr9:117027709 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_110382 0 0 12 BUD13 POSTAR2 ENCODE chr9:117027700-117027746
64251 chr9 90345955 90345955 1 + T C UCEC 90345953 + 90345933 90345973 41 GAATGGGGCATGGGTGGCTACGTAAAGATGGCCAAAGACCG GAATGGGGCATGGGTGGCTACGCAAAGATGGCCAAAGACCG < 41bp 0.564206116160861 0.806985518062141 0.1682947 0.16580012 prediction 0.48555880380256 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90345953 chr9:90345955 nonsynonymous SNV 0.420 1 23 hm5C_associated_SNPs_110383 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:90345954-90345955
64251 chr10 75552164 75552164 1 + C A UCEC 75552163 + 75552143 75552183 41 CCAGACCTGGCCGAGATGAGCCTGGATGACAGCAGCCTGGC CCAGACCTGGCCGAGATGAGCATGGATGACAGCAGCCTGGC < 41bp 0.491228050180468 0.742765422282519 0.3507923 0.77979517 prediction 0.485530844565038 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75552163 chr10:75552164 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_110385 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:75552160-75552180
64251 chr2 74076552 74076552 1 + C T UCEC 74076551 + 74076531 74076571 41 CGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACAC CGGCTGTGCCCACAGTTTCTCTAGTTAGCCAGTGCCAACAC < 41bp 0.533947912623771 0.776707812340421 0.16173404 0.28849477 prediction 0.4855197994333 Functional Gain - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74076551 chr2:74076552 stopgain 0.987 1 22 hm5C_associated_SNPs_110386 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:74076538-74076587
64251 chr20 31596430 31596430 1 + T A rs149889663 31596426 + 31596406 31596446 41 TGCTGCTGGCACTGCTGCTGCCCGTGGTCGGTGCCTCCACG TGCTGCTGGCACTGCTGCTGCCCGAGGTCGGTGCCTCCACG < 41bp 0.42196948186226 0.742745900786633 0.30486512 0.8305242 prediction 0.485491801573267 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31596426 chr20:31596430 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_110393 0 0 4 DDX3X POSTAR2 ENCODE chr20:31596390-31596468
64251 chr7 73944105 73944105 1 + C T LIHC 73944104 + 73944084 73944124 41 CACATGGTCCCCGTGCCCTACCGGAAGATTGCCTGTGACCC CACATGGTCCCCGTGCCCTACTGGAAGATTGCCTGTGACCC < 41bp 0.552881541120985 0.795619651511728 0.77410066 0.21903211 prediction 0.485476220781485 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73944104 chr7:73944105 nonsynonymous SNV 0.970 4 22 hm5C_associated_SNPs_110396 0 0 4 DDX24 POSTAR2 ENCODE chr7:73944091-73944127
64251 chr19 37854518 37854518 1 + T C LUSC 37854516 + 37854496 37854536 41 CACACGCAGGGGGGAAGCCTCATGTGTGCAGGGAGTGTGGG CACACGCAGGGGGGAAGCCTCACGTGTGCAGGGAGTGTGGG < 41bp 0.50097629120622 0.74371116182138 0.23746505 0.2500049 prediction 0.485469741230319 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854516 chr19:37854518 synonymous SNV . 0 23 hm5C_associated_SNPs_110397 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:37854498-37854598
64251 chr19 8321168 8321168 1 + C A HNSC 8321167 + 8321147 8321187 41 TGCTGGGACAGGTACCCAAACCAGGTGAGTGGCAGAGTGTG TGCTGGGACAGGTACCCAAACAAGGTGAGTGGCAGAGTGTG < 41bp 0.477822157052584 0.742724007754395 0.73063135 0.7646407 prediction 0.48544801550879 Functional Gain - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8321167 chr19:8321168 nonsynonymous SNV 0.157 3 22 hm5C_associated_SNPs_110402 0 0 2 EFTUD2 POSTAR2 ENCODE chr19:8321133-8321179
64251 chr8 27279824 27279824 1 + C T COAD 27279823 + 27279803 27279843 41 GACCTTTCTCCCCACCAGCTCCGGAACGACTACATGCAGCG GACCTTTCTCCCCACCAGCTCTGGAACGACTACATGCAGCG < 41bp 0.501764846861917 0.744484911375063 0.5085107 0.35869774 prediction 0.485440129026291 Functional Gain - PTK2B ENSG00000120899 CDS Human protein_coding chr8:27279823 chr8:27279824 nonsynonymous SNV 0.958 4 22 hm5C_associated_SNPs_110404 0 0 2 DDX24 POSTAR2 ENCODE chr8:27279820-27279884
64251 chr17 40765934 40765934 1 + T C UCEC 40765932 + 40765912 40765952 41 GGCTACATGAACAATGACCTCATCGGCCTCATCGCCTCGCT GGCTACATGAACAATGACCTCACCGGCCTCATCGCCTCGCT < 41bp 0.467214115218111 0.742716034860749 0.114892215 0.1086925 prediction 0.485432069721499 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765932 chr17:40765934 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_110405 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:40765904-40765934
64251 chr21 37716981 37716981 1 + T C UCEC 37716979 + 37716959 37716999 41 AGAGTCTTGCCTACATCGAACGTGATGTTTATCGACCAAAA AGAGTCTTGCCTACATCGAACGCGATGTTTATCGACCAAAA < 41bp 0.46949283213884 0.74271340706438 0.23841864 0.14323068 prediction 0.485426814128761 Functional Gain - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37716979 chr21:37716981 synonymous SNV . 0 23 hm5C_associated_SNPs_110408 0 0 4 GRWD1 POSTAR2 ENCODE chr21:37716946-37717016
64251 chr1 55518385 55518385 1 + C A rs41297883 55518381 + 55518361 55518401 41 GGTGGTCAGCGGCCGGGATGCCGGCGTGGCCAAGGGTGCCA GGTGGTCAGCGGCCGGGATGCCGGAGTGGCCAAGGGTGCCA < 41bp 0.67866540874611 0.921376042242362 0.7471318 0.8499836 prediction 0.485421266992504 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55518381 chr1:55518385 synonymous SNV . 0 25 hm5C_associated_SNPs_110409 0 0 9 BUD13 POSTAR2 ENCODE chr1:55518284-55518388
64251 chr10 112769572 112769572 1 + C A ESCA 112769568 + 112769548 112769588 41 CCTTGGAGAGAACCTACTTACTCACCTTCCTGAAGAAATTG CCTTGGAGAGAACCTACTTACTCAACTTCCTGAAGAAATTG < 41bp 0.317137743137392 0.742700599185067 0.021056563 0.063479185 prediction 0.485401198370135 Functional Gain - SHOC2 ENSG00000108061 CDS Human protein_coding chr10:112769568 chr10:112769572 nonsynonymous SNV 0.990 0 25 hm5C_associated_SNPs_110413 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:112769555-112769579
64251 chr19 47774680 47774680 1 + C G rs117519030 47774676 + 47774656 47774696 41 AGAAGGTGATGAGGAGGAACCAGCCCAAGACCACCAAGCCC AGAAGGTGATGAGGAGGAACCAGCGCAAGACCACCAAGCCC < 41bp 0.589008149639814 0.831707570800531 0.8884898 0.9032475 prediction 0.485398842321434 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774676 chr19:47774680 synonymous SNV . 0 25 hm5C_associated_SNPs_110414 0 0 9 DDX6 POSTAR2 ENCODE chr19:47774600-47774696
64251 chr1 44169289 44169289 1 - G C LUSC 44169293 - 44169273 44169313 41 GGACCAAACTGGAGACAGTCCTGGCTCTGAGGAAACAGGAA GGACCAAACTGGAGACAGTCCTGGGTCTGAGGAAACAGGAA < 41bp 0.572636257253155 0.815328619681178 0.12776193 0.25111127 prediction 0.485384724856045 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44169293 chr1:44169289 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_110417 0 0 1 PPIG POSTAR2 ENCODE chr1:44169226-44169306
64251 chr22 41572404 41572404 1 + C T BLCA 41572403 + 41572383 41572423 41 CACCTGGAGTTCTCTTCACTCCGAAGAGCCCAGTGGTCCAC CACCTGGAGTTCTCTTCACTCTGAAGAGCCCAGTGGTCCAC < 41bp 0.489745819737828 0.74267233041486 0.41544533 0.11505121 prediction 0.485344660829721 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41572403 chr22:41572404 stopgain 0.998 0 22 hm5C_associated_SNPs_110420 1 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:41572391-41572415
64251 chr3 142499740 142499740 1 + C T CESC 142499739 + 142499719 142499759 41 AAGGATTTACTTGCACAAGCCCGGAATTCTCGTGAATTGGA AAGGATTTACTTGCACAAGCCTGGAATTCTCGTGAATTGGA < 41bp 0.493837078580541 0.742645968288705 0.25687006 0.2819984 prediction 0.48529193657741 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142499739 chr3:142499740 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_110425 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:142499719-142499742
64251 chr10 99212022 99212022 1 + C T STAD 99212021 + 99212001 99212041 41 ACTACCAGGCCATCACCACTCCGCCTGGGTACCCACCCCAG ACTACCAGGCCATCACCACTCTGCCTGGGTACCCACCCCAG < 41bp 0.51120591776941 0.75384952553482 0.11722258 0.16919869 prediction 0.485287215530819 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99212021 chr10:99212022 nonsynonymous SNV 0.940 1 22 hm5C_associated_SNPs_110427 0 0 7 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr10:99211991-99212023
64251 chr19 36727612 36727612 1 + C A KIRP 36727608 + 36727588 36727628 41 CCAGAAGGAAAACCTCCTTACGCACCAGAAAATTCACACTG CCAGAAGGAAAACCTCCTTACGCAACAGAAAATTCACACTG < 41bp 0.330689459076513 0.74263936453898 0.10386294 0.14083284 prediction 0.48527872907796 Functional Gain - ZNF146 ENSG00000167635 CDS Human protein_coding chr19:36727608 chr19:36727612 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_110428 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:36726516-36728221
64251 chr20 55052100 55052100 1 + T G UCEC 55052097 + 55052077 55052117 41 TGGGAAGGGGATAAAGGAAACACTAAAGGTGACAAGCACGA TGGGAAGGGGATAAAGGAAACACGAAAGGTGACAAGCACGA < 41bp 0.671548195539201 0.914175032525899 0.105510265 0.10532829 prediction 0.485253673973396 Functional Gain - RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55052097 chr20:55052100 synonymous SNV . 0 24 hm5C_associated_SNPs_110434 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55052039-55052101
64251 chr18 77895177 77895177 1 + C T SKCM 77895176 + 77895156 77895196 41 GTCTGTCACTCTGCCGGTTCCCCCTGGAGGCCTTGCGACTG GTCTGTCACTCTGCCGGTTCCTCCTGGAGGCCTTGCGACTG < 41bp 0.489013321056105 0.742615198285228 0.09726778 0.16743425 prediction 0.485230396570457 Functional Gain - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77895176 chr18:77895177 synonymous SNV . 0 22 hm5C_associated_SNPs_110439 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr18:77895129-77895195
64251 chr16 8738530 8738530 1 + C T SKCM 8738529 + 8738509 8738549 41 AGCTGCGCTTCGTGGTGGAGCCCGTGGAGGCCTCCTTCCCA AGCTGCGCTTCGTGGTGGAGCTCGTGGAGGCCTCCTTCCCA < 41bp 0.508467731966693 0.751077713725578 0.42633465 0.37641588 prediction 0.48521996351777 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8738529 chr16:8738530 nonsynonymous SNV 0.978 0 22 hm5C_associated_SNPs_110441 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:8738507-8738532
64251 chr16 2259370 2259370 1 - G T SKCM 2259371 - 2259351 2259391 41 CGGTCTGCTTTTATTACCTCCCAGACTGAGCCCCCGACCTG CGGTCTGCTTTTATTACCTCCAAGACTGAGCCCCCGACCTG < 41bp 0.527455596780108 0.770064419233621 0.027563304 0.046735406 prediction 0.485217644907026 Functional Gain - BRICD5 ENSG00000182685 CDS Human protein_coding chr16:2259371 chr16:2259370 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_110442 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917678 chr16:2259360-2259380
64251 chr2 127453543 127453543 1 + T C rs115201071 127453541 + 127453521 127453561 41 GGTGTGATTGCTGCTGTGGCCATCGTCCTAGTCTCCCTCCT GGTGTGATTGCTGCTGTGGCCACCGTCCTAGTCTCCCTCCT < 41bp 0.54079050418991 0.783398119843382 0.1149348 0.110987574 prediction 0.485215231306943 Functional Gain - GYPC ENSG00000136732 CDS Human protein_coding chr2:127453541 chr2:127453543 nonsynonymous SNV 0.007 1 23 hm5C_associated_SNPs_110443 0 0 1 LIN28B POSTAR2 ENCODE chr2:127453530-127453569
64251 chr2 177033868 177033868 1 + C A LUSC 177033864 + 177033844 177033884 41 TGTTATTTGAGCAGGGTCAGCAGGCCCTGGAGCTTCCTGAG TGTTATTTGAGCAGGGTCAGCAGGACCTGGAGCTTCCTGAG < 41bp 0.677781424762523 0.920361202222194 0.8455728 0.82273805 prediction 0.485159554919341 Functional Gain - HOXD3 ENSG00000128652 CDS Human protein_coding chr2:177033864 chr2:177033868 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_110454 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:177033864-177033886
64251 chr10 23728964 23728964 1 + T G rs555016199 23728962 + 23728942 23728982 41 CGGGAGGGGCCCGATCGGAACTTCCGACTGAGCGAGCACCG CGGGAGGGGCCCGATCGGAACTGCCGACTGAGCGAGCACCG < 41bp 0.403685676834779 0.742578215812339 0.16321522 0.2516151 prediction 0.485156431624678 Functional Gain - OTUD1 ENSG00000165312 CDS Human protein_coding chr10:23728962 chr10:23728964 nonsynonymous SNV 0.986 1 23 hm5C_associated_SNPs_110455 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:23728963-23728964
64251 chr10 121436443 121436443 1 + C T HNSC 121436442 + 121436422 121436462 41 GATGATCGAAGAGTATTTGACCAAAGAGCTGCTGGCCCTGG GATGATCGAAGAGTATTTGACTAAAGAGCTGCTGGCCCTGG < 41bp 0.521257192489003 0.763834372200215 0.08357915 0.17944923 prediction 0.485154359422425 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436442 chr10:121436443 synonymous SNV . 0 22 hm5C_associated_SNPs_110456 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:121436442-121436443
64251 chr8 26265602 26265602 1 + C T COAD 26265601 + 26265581 26265621 41 ATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAGT ATCAGACTGGTCCAGTAGACCTGAAAACATTCCACCCAAGT < 41bp 0.488080566296487 0.742567868981344 0.05517727 0.06465912 prediction 0.485135737962687 Functional Gain - BNIP3L ENSG00000104765 CDS Human protein_coding chr8:26265601 chr8:26265602 synonymous SNV . 0 22 hm5C_associated_SNPs_110457 0 0 7 BUD13 POSTAR2 ENCODE chr8:26265510-26265630
64251 chr12 124144091 124144091 1 + T C CESC 124144089 + 124144069 124144109 41 GACATCACGGGAGGACTGTACCTGAAGGTGCCTCAGATGCC GACATCACGGGAGGACTGTACCCGAAGGTGCCTCAGATGCC < 41bp 0.446549095016993 0.742553676784534 0.08420169 0.14844143 prediction 0.485107353569069 Functional Gain - GTF2H3 ENSG00000111358 CDS Human protein_coding chr12:124144089 chr12:124144091 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_110460 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:124144065-124144099
64251 chr1 206613361 206613361 1 + C T OV 206613360 + 206613340 206613380 41 CAGGAGAGAGCTCTGCACATCCGGAAAGTCCTCCTAGTCCT CAGGAGAGAGCTCTGCACATCTGGAAAGTCCTCCTAGTCCT < 41bp 0.540620660644502 0.783148653131081 0.24537855 0.2605027 prediction 0.485055984973159 Functional Gain - SRGAP2 ENSG00000163486 CDS Human other chr1:206613360 chr1:206613361 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_110466 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206613349-206613372
64251 chr20 57767077 57767077 1 + C A rs200257836 57767076 + 57767056 57767096 41 GATGCCAAGGCCCCCGAGGGCCGGCTGCGGAAGTGTGAGAG GATGCCAAGGCCCCCGAGGGCAGGCTGCGGAAGTGTGAGAG < 41bp 0.509385287314541 0.751907177565983 0.62756956 0.80751944 prediction 0.485043780502884 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767076 chr20:57767077 synonymous SNV . 0 22 hm5C_associated_SNPs_110467 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:57767046-57767087
64251 chr5 129240688 129240688 1 + C A KIRC 129240684 + 129240664 129240704 41 TACGGTCGCTCTGCTGCTGGCCCCCGCGCCGGCGCTCAGCA TACGGTCGCTCTGCTGCTGGCCCCAGCGCCGGCGCTCAGCA < 41bp 0.353488255914507 0.742508041746382 0.055109203 0.20897427 prediction 0.485016083492763 Functional Gain - CHSY3 ENSG00000198108 CDS Human protein_coding chr5:129240684 chr5:129240688 nonsynonymous SNV 0.061 0 25 hm5C_associated_SNPs_110474 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:129240650-129240688
64251 chr12 119591420 119591420 1 + C T UCEC 119591419 + 119591399 119591439 41 AGCAGAAGCTCTAGGTCCCGCCGCAGCCCTAGCTACTCCCG AGCAGAAGCTCTAGGTCCCGCTGCAGCCCTAGCTACTCCCG < 41bp 0.513340529043821 0.755844934092033 0.07381463 0.07730731 prediction 0.485008810096425 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119591419 chr12:119591420 nonsynonymous SNV 0.868 4 22 hm5C_associated_SNPs_110475 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119591400-119591420
64251 chr7 100780299 100780299 1 + C A LUAD 100780298 + 100780278 100780318 41 GCAGCTGTCATAGTCTCAGCCCGCATGGCCCCCGAGGAGAT GCAGCTGTCATAGTCTCAGCCAGCATGGCCCCCGAGGAGAT < 41bp 0.504504814626425 0.746992011307091 0.03740543 0.114620894 prediction 0.484974393361332 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100780298 chr7:100780299 nonsynonymous SNV 0.066 4 22 hm5C_associated_SNPs_110479 0 0 7 BUD13 POSTAR2 ENCODE chr7:100780279-100780317
64251 chr3 112969477 112969477 1 + T G OV 112969475 + 112969455 112969495 41 GGCACTGTGATCTTGGGCTGCGTGGTGGAACCTCCAAGGAT GGCACTGTGATCTTGGGCTGCGGGGTGGAACCTCCAAGGAT < 41bp 0.407431591953656 0.742479447108264 0.37713984 0.8759688 prediction 0.484958894216527 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112969475 chr3:112969477 nonsynonymous SNV 0.681 0 23 hm5C_associated_SNPs_110482 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr3:112969460-112969495
64251 chr19 35551628 35551628 1 + C G KIRC 35551624 + 35551604 35551644 41 CTGGGGGTGCAGGCTGTGGTCTACCACGGGGGCTATCTTCC CTGGGGGTGCAGGCTGTGGTCTACGACGGGGGCTATCTTCC < 41bp 0.446169837256319 0.742473211419871 0.010421097 0.08652645 prediction 0.484946422839742 Functional Gain - HPN ENSG00000105707 CDS Human protein_coding chr19:35551624 chr19:35551628 nonsynonymous SNV 0.789 5 25 hm5C_associated_SNPs_110485 0 0 1 DDX3X POSTAR2 ENCODE chr19:35551563-35551632
64251 chr12 118462787 118462787 1 + C T COAD 118462786 + 118462766 118462806 41 ACTCCTGAACTCATGGTTCCCCGCCTGGAACATGTCGTGGA ACTCCTGAACTCATGGTTCCCTGCCTGGAACATGTCGTGGA < 41bp 0.487263103973753 0.742468927950046 0.02110058 0.02468136 prediction 0.484937855900091 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118462786 chr12:118462787 nonsynonymous SNV 0.986 3 22 hm5C_associated_SNPs_110486 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:118462711-118462796
64251 chr17 46000348 46000348 1 + C T rs146862346 46000347 + 46000327 46000367 41 GGTCTACATCCGCACGCCTTCCGGTGAGGTGCAGACAGTCC GGTCTACATCCGCACGCCTTCTGGTGAGGTGCAGACAGTCC < 41bp 0.493566891066364 0.742462162737034 0.30984813 0.1639741 prediction 0.484924325474068 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:46000347 chr17:46000348 synonymous SNV . 0 22 hm5C_associated_SNPs_110488 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:46000328-46000348
64251 chr9 127055225 127055225 1 + C A UCEC 127055224 + 127055204 127055244 41 AGGCTGCCTGGAGGAGATGCCCAGGAGAGAAGTTTGCTGGG AGGCTGCCTGGAGGAGATGCCAAGGAGAGAAGTTTGCTGGG < 41bp 0.544148834649968 0.786607953547847 0.82768583 0.8814038 prediction 0.484918237795756 Functional Gain - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127055224 chr9:127055225 synonymous SNV . 0 22 hm5C_associated_SNPs_110490 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:127055211-127055232
64251 chr14 20925378 20925378 1 + C T UCEC 20925377 + 20925357 20925397 41 AAGAAATTGACCTTCGCAACCCCAAGGGGAACAAAAAGAAT AAGAAATTGACCTTCGCAACCTCAAGGGGAACAAAAAGAAT < 41bp 0.473595810234179 0.742450994672667 0.1025663 0.074140996 prediction 0.484901989345333 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20925377 chr14:20925378 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110492 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:20925294-20925382
64251 chr2 47601106 47601106 1 + T C rs1126497 47601104 + 47601084 47601124 41 AAGCAGTGCAACGGCACCTCCATGTGCTGGTGTGTGAACAC AAGCAGTGCAACGGCACCTCCACGTGCTGGTGTGTGAACAC < 41bp 0.577641207368952 0.820067618692375 0.23409873 0.3419457 prediction 0.484852822646847 Functional Gain - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47601104 chr2:47601106 nonsynonymous SNV 0.815 0 23 hm5C_associated_SNPs_110496 3 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:47601092-47601130
64251 chr17 46128610 46128610 1 + C A UCEC 46128609 + 46128589 46128629 41 CCCCCACTCCGGGAGATCATCCTGGGGCCCAGTTCTGCCTA CCCCCACTCCGGGAGATCATCATGGGGCCCAGTTCTGCCTA < 41bp 0.566026286944941 0.808443670516659 0.8826684 0.92221135 prediction 0.484834767143436 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46128609 chr17:46128610 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110501 0 0 6 EIF3D POSTAR2 GSE65004,GSM1585671 chr17:46128585-46128611
64251 chr10 75868839 75868839 1 + C T UCEC 75868838 + 75868818 75868858 41 AGAGTTCCCTGAGCAGAAGGCCGGGGAGGTGATTAACCAGC AGAGTTCCCTGAGCAGAAGGCTGGGGAGGTGATTAACCAGC < 41bp 0.510943398418908 0.753352850303823 0.88832223 0.83509284 prediction 0.48481890376983 Functional Gain - VCL ENSG00000035403 CDS Human protein_coding chr10:75868838 chr10:75868839 synonymous SNV . 0 22 hm5C_associated_SNPs_110507 0 0 5 GRWD1 POSTAR2 ENCODE chr10:75868740-75868926
64251 chr12 53670563 53670563 1 + C A rs61760168 53670559 + 53670539 53670579 41 GCTGAGCCCCGAGGAGACACCAGCCGGGGCCTGGGCACGAG GCTGAGCCCCGAGGAGACACCAGCAGGGGCCTGGGCACGAG < 41bp 0.688583104735387 0.930975251727871 0.105265826 0.10305533 prediction 0.484784293984967 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670559 chr12:53670563 synonymous SNV . 0 25 hm5C_associated_SNPs_110510 0 0 6 AARS POSTAR2 ENCODE chr12:53670528-53670595
64251 chr11 2937892 2937892 1 + C A LGG 2937891 + 2937871 2937911 41 CTGGCTGCCCTGGCCACCCTCCTGGGAGCTGTCCTCAGCTT CTGGCTGCCCTGGCCACCCTCATGGGAGCTGTCCTCAGCTT < 41bp 0.551797521572123 0.794173005009528 0.26589248 0.91019595 prediction 0.484750966874809 Functional Gain - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2937891 chr11:2937892 nonsynonymous SNV 0.063 0 22 hm5C_associated_SNPs_110516 0 0 1 DDX24 POSTAR2 ENCODE chr11:2937798-2937917
64251 chr1 230391063 230391063 1 + C T STAD 230391062 + 230391042 230391082 41 AGCAGCACCCCTACACGTTCCCGGGTGGCAGTGGCACTGTC AGCAGCACCCCTACACGTTCCTGGGTGGCAGTGGCACTGTC < 41bp 0.519736731055323 0.762102062845697 0.8714858 0.6577535 prediction 0.484730663580746 Functional Gain - GALNT2 ENSG00000143641 CDS Human protein_coding chr1:230391062 chr1:230391063 nonsynonymous SNV 0.871 4 22 hm5C_associated_SNPs_110523 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:230391053-230391080
64251 chr5 150867587 150867587 1 + C T SKCM 150867586 + 150867566 150867606 41 CCGCCTGGACCTGGTCATCTCCCTGGTGGGCTCCGTGAGCA CCGCCTGGACCTGGTCATCTCTCTGGTGGGCTCCGTGAGCA < 41bp 0.491561003678473 0.742363017142984 0.15693405 0.38015434 prediction 0.484726034285968 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150867586 chr5:150867587 synonymous SNV . 0 22 hm5C_associated_SNPs_110526 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:150867579-150867610
64251 chr4 187115733 187115733 1 + C T SKCM 187115732 + 187115712 187115752 41 GCTCTGGGTCGGGCCAGTGCCCATGGTGGCCCTTTATAATG GCTCTGGGTCGGGCCAGTGCCTATGGTGGCCCTTTATAATG < 41bp 0.499447681447206 0.742362435055923 0.029778749 0.026236653 prediction 0.484724870111846 Functional Gain - CYP4V2 ENSG00000145476 CDS Human protein_coding chr4:187115732 chr4:187115733 synonymous SNV . 0 22 hm5C_associated_SNPs_110527 0 0 1 U2AF2 POSTAR2 ENCODE chr4:187115648-187115738
64251 chr2 47168856 47168856 1 + C G rs201805434 47168855 + 47168835 47168875 41 CGAGCGCAGCGTTCACCTTTCCGGACACCGGTGAGTAAGGG CGAGCGCAGCGTTCACCTTTCGGGACACCGGTGAGTAAGGG < 41bp 0.612375250416448 0.854721296193955 0.5052143 0.88661563 prediction 0.484692091555014 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47168855 chr2:47168856 nonsynonymous SNV 0.463 0 22 hm5C_associated_SNPs_110530 0 0 3 EFTUD2 POSTAR2 ENCODE chr2:47168853-47168909
64251 chr10 75560160 75560160 1 + C G rs181929079 75560156 + 75560136 75560176 41 GGTGAGCGGAGGTTTTCCACCGCCCGAGGAGGAGACACACA GGTGAGCGGAGGTTTTCCACCGCCGGAGGAGGAGACACACA < 41bp 0.462993589277697 0.742329727665525 0.23876312 0.89418995 prediction 0.48465945533105 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75560156 chr10:75560160 synonymous SNV . 0 25 hm5C_associated_SNPs_110534 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:75560160-75560180
64251 chr21 47414120 47414120 1 + C T SKCM 47414119 + 47414099 47414139 41 GGTGATCAGGGAAGAGAAGGCCCCGTTGGTGTCCCTGGAGA GGTGATCAGGGAAGAGAAGGCTCCGTTGGTGTCCCTGGAGA < 41bp 0.505783612090959 0.748110127159462 0.3068859 0.34897643 prediction 0.484653030137006 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47414119 chr21:47414120 nonsynonymous SNV 0.130 1 22 hm5C_associated_SNPs_110535 0 0 4 PPIG POSTAR2 ENCODE chr21:47414118-47414144
64251 chr16 2283125 2283125 1 + C T SKCM 2283124 + 2283104 2283144 41 GATGCCAAGGGCACCGTCATCCACGAAGTCCACGTCCAGAT GATGCCAAGGGCACCGTCATCTACGAAGTCCACGTCCAGAT < 41bp 0.485370734552354 0.742319972862486 0.33387637 0.4834684 prediction 0.484639945724973 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2283124 chr16:2283125 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_110537 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2283104-2283128
64251 chr1 11808583 11808583 1 + C A UCEC 11808582 + 11808562 11808602 41 TTTGGCGTGGGCATGGCCATCCTCAGCTTGCTGCTCAAGCC TTTGGCGTGGGCATGGCCATCATCAGCTTGCTGCTCAAGCC < 41bp 0.523758965956438 0.766071034846241 0.1453054 0.16559961 prediction 0.484624137779606 Functional Gain - AGTRAP ENSG00000177674 CDS Human protein_coding chr1:11808582 chr1:11808583 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_110538 0 0 5 GRWD1 POSTAR2 ENCODE chr1:11808471-11808641
64251 chr7 75583370 75583370 1 + C T SKCM 75583369 + 75583349 75583389 41 CACCGTGTCCGAGGCGGTGGCCGAAGAAGTATCTCTTTTCA CACCGTGTCCGAGGCGGTGGCTGAAGAAGTATCTCTTTTCA < 41bp 0.508963769204822 0.751275139131063 0.37239575 0.36921763 prediction 0.484622739852481 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75583369 chr7:75583370 synonymous SNV . 0 22 hm5C_associated_SNPs_110540 0 0 2 DDX3X POSTAR2 ENCODE chr7:75583306-75583376
64251 chr11 3829808 3829808 1 + C G rs191164612 3829807 + 3829787 3829827 41 GCCGTTCGCGCTCTGACCAGCCCGCAGAGCCAGCCCCCGAC GCCGTTCGCGCTCTGACCAGCGCGCAGAGCCAGCCCCCGAC < 41bp 0.468328475016662 0.742307048257661 0.36651167 0.7959355 prediction 0.484614096515323 Functional Gain - PGAP2 ENSG00000148985 UTR5 Human protein_coding chr11:3829807 chr11:3829808 . . 0 22 hm5C_associated_SNPs_110541 0 0 1 DDX3X POSTAR2 ENCODE chr11:3829791-3829838
64251 chr3 38182688 38182688 1 + C T SKCM 38182687 + 38182667 38182707 41 AAGAAAGAGTTCCCCAGCATCCTGAGGTTCATCACTGTCTG AAGAAAGAGTTCCCCAGCATCTTGAGGTTCATCACTGTCTG < 41bp 0.520063430282102 0.762364681109352 0.18272343 0.22754669 prediction 0.484602501654499 Functional Gain - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38182687 chr3:38182688 synonymous SNV . 0 22 hm5C_associated_SNPs_110542 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:38182650-38182688
64251 chr19 16238834 16238834 1 + A G SKCM 16238831 + 16238811 16238851 41 ATGCGTGTGCCTCCCTCTCTCACAGCTGGCCCTCGACTATG ATGCGTGTGCCTCCCTCTCTCACGGCTGGCCCTCGACTATG < 41bp 0.522417698697595 0.764704608610035 0.31492501 0.84521955 prediction 0.484573819824881 Functional Gain - RAB8A ENSG00000167461 splicing Human protein_coding chr19:16238831 chr19:16238834 . 0.833 0 24 hm5C_associated_SNPs_110544 0 0 5 BUD13 POSTAR2 ENCODE chr19:16238786-16238899
64251 chr1 15988085 15988085 1 + C G LIHC 15988081 + 15988061 15988101 41 TCTTCCACCATTGATTTTTCCTGCCACAGATATTGACCGCA TCTTCCACCATTGATTTTTCCTGCGACAGATATTGACCGCA < 41bp 0.476384355220996 0.742282776517962 0.037824064 0.09104875 prediction 0.484565553035924 Functional Gain - RSC1A1 ENSG00000215695 CDS Human protein_coding chr1:15988081 chr1:15988085 synonymous SNV . 0 25 hm5C_associated_SNPs_110545 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:15988073-15988087
64251 chrX 19368154 19368154 1 + C T LGG 19368153 + 19368133 19368173 41 AGGATGATGCAGACTGTACGCCGAATGGAGTTGAAAGCAGA AGGATGATGCAGACTGTACGCTGAATGGAGTTGAAAGCAGA < 41bp 0.506516477547909 0.748797380860109 0.121599525 0.17139655 prediction 0.484561806624402 Functional Gain - PDHA1 ENSG00000131828 CDS Human protein_coding chrX:19368153 chrX:19368154 stopgain 0.998 1 22 hm5C_associated_SNPs_110547 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:19368116-19368154
64251 chr1 6270330 6270330 1 + T G STAD 6270328 + 6270308 6270348 41 TTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCAC TTCAAGGAGCAGCTCTCTCACTGGGCCACCTTGCTGCCCAC < 41bp 0.659487496808945 0.901761487021178 0.83898646 0.92825294 prediction 0.484547980424467 Functional Gain - RNF207 ENSG00000158286 CDS Human protein_coding chr1:6270328 chr1:6270330 nonsynonymous SNV 0.464 3 23 hm5C_associated_SNPs_110549 0 0 2 PPIG POSTAR2 ENCODE chr1:6270287-6270353
64251 chr17 37884353 37884353 1 + C G rs545634588 37884352 + 37884332 37884372 41 TCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAA TCCTCAGGGAGCAGGGAAGGCGTGACTTCTGCTGGCATCAA < 41bp 0.449797401019711 0.742270052764573 0.33118927 0.5144949 prediction 0.484540105529146 Functional Gain - ERBB2 ENSG00000141736 UTR3 Human protein_coding chr17:37884352 chr17:37884353 . . 0 22 hm5C_associated_SNPs_110551 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:37884328-37884370
64251 chr16 85707249 85707249 1 + C A rs184748329 85707245 + 85707225 85707265 41 AGTTTGAGTTGCACCAGAAGCTGCCGTAGAAAGCCATGCGC AGTTTGAGTTGCACCAGAAGCTGCAGTAGAAAGCCATGCGC < 41bp 0.345303035482233 0.742268920231756 0.23527798 0.2983176 prediction 0.484537840463513 Functional Gain - GSE1 ENSG00000131149 UTR3 Human protein_coding chr16:85707245 chr16:85707249 . . 0 25 hm5C_associated_SNPs_110552 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:85707220-85707253
64251 chr20 1918165 1918165 1 + C T STAD 1918164 + 1918144 1918184 41 CCAAGCAGCCGGCCCCCAAGCCTGAGCCGTCCTTCTCAGAG CCAAGCAGCCGGCCCCCAAGCTTGAGCCGTCCTTCTCAGAG < 41bp 0.513071263489841 0.75532238369857 0.009563327 0.011589617 prediction 0.484502240417459 Functional Gain - SIRPA ENSG00000198053 CDS Human protein_coding chr20:1918164 chr20:1918165 nonsynonymous SNV 0.978 3 22 hm5C_associated_SNPs_110556 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:1918156-1918182
64251 chr8 61654293 61654293 1 + C T HNSC 61654292 + 61654272 61654312 41 CTGGGAACGGACTCGCGTCTCCGCACTCGCAGTATCACACC CTGGGAACGGACTCGCGTCTCTGCACTCGCAGTATCACACC < 41bp 0.501645116596445 0.743894622773313 0.28709114 0.326737 prediction 0.484499012353736 Functional Gain - CHD7 ENSG00000171316 CDS Human protein_coding chr8:61654292 chr8:61654293 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_110557 0 0 2 UCHL5 POSTAR2 ENCODE chr8:61654258-61654328
64251 chr7 106508252 106508252 1 + C G LUSC 106508248 + 106508228 106508268 41 GTGGCTGCGAGCGCTGGAGACCAGCGTGGCGGCGGACTTCT GTGGCTGCGAGCGCTGGAGACCAGGGTGGCGGCGGACTTCT < 41bp 0.610266086286247 0.852514433939291 0.81427956 0.9045184 prediction 0.484496695306087 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508248 chr7:106508252 nonsynonymous SNV 0.090 1 25 hm5C_associated_SNPs_110558 0 0 3 FMR1 POSTAR2 ENCODE chr7:106508240-106508289
64251 chr16 14738324 14738324 1 + C T LUAD 14738323 + 14738303 14738343 41 TGCCACTGCTGCTACGACATCCTGGTTAACCCCACCACCTT TGCCACTGCTGCTACGACATCTTGGTTAACCCCACCACCTT < 41bp 0.488897139604577 0.742242171323825 0.36614442 0.19251814 prediction 0.48448434264765 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14738323 chr16:14738324 synonymous SNV . 0 22 hm5C_associated_SNPs_110561 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:14738293-14738331
64251 chr1 243433537 243433537 1 + C A THCA 243433536 + 243433516 243433556 41 GGACGCCAGGACAGCCTGGCCCGAATTACAACAGAGCCATG GGACGCCAGGACAGCCTGGCCAGAATTACAACAGAGCCATG < 41bp 0.529713373917944 0.771941399620007 0.082868844 0.3552804 prediction 0.484456051404127 Functional Gain - SDCCAG8 ENSG00000054282 CDS Human protein_coding chr1:243433536 chr1:243433537 synonymous SNV . 0 22 hm5C_associated_SNPs_110565 0 0 1 GRWD1 POSTAR2 ENCODE chr1:243433482-243433550
64251 chr10 5777484 5777484 1 + C A LIHC 5777483 + 5777463 5777503 41 AGTAAAAGGCAATGAGAACCCCAGAAACAGAAAGCAGCTAC AGTAAAAGGCAATGAGAACCCAAGAAACAGAAAGCAGCTAC < 41bp 0.498858818816584 0.742208755705539 0.19862854 0.14293882 prediction 0.484417511411079 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5777483 chr10:5777484 synonymous SNV . 0 22 hm5C_associated_SNPs_110567 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:5777445-5777498
64251 chr20 307654 307654 1 + C G rs539655506 307653 + 307633 307673 41 TCCTGGACGTGCCCATCCCCCCTCAGATCCAGACATGCCCC TCCTGGACGTGCCCATCCCCCGTCAGATCCAGACATGCCCC < 41bp 0.442456812475227 0.742151334530034 0.01389271 0.07714352 prediction 0.484302669060068 Functional Gain - SOX12 ENSG00000225377 ncRNA_intronic Human antisense chr20:307653 chr20:307654 . . 0 22 hm5C_associated_SNPs_110582 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:307654-307655
64251 chrX 118604446 118604446 1 + C T UCEC 118604445 + 118604425 118604465 41 CCATTTGACACTGTTCGCCGCCGCATGATGATGCAGTCAGG CCATTTGACACTGTTCGCCGCTGCATGATGATGCAGTCAGG < 41bp 0.49085979218018 0.742145962102979 0.06199357 0.055663437 prediction 0.484291924205957 Functional Gain - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118604445 chrX:118604446 nonsynonymous SNV 0.053 4 22 hm5C_associated_SNPs_110583 0 0 31 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:118604338-118604451
64251 chr14 57085396 57085396 1 + C A LUAD 57085395 + 57085375 57085415 41 GCAGTTGTGTCTGAGACTAACCGAGTGCTGAATAGCAATGG GCAGTTGTGTCTGAGACTAACAGAGTGCTGAATAGCAATGG < 41bp 0.530629870418488 0.772772745635808 0.4257994 0.82989407 prediction 0.48428575043464 Functional Gain - TMEM260 ENSG00000070269 CDS Human protein_coding chr14:57085395 chr14:57085396 synonymous SNV . 0 22 hm5C_associated_SNPs_110584 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr14:57085362-57085412
64251 chr22 35661213 35661213 1 + C G SKCM 35661212 + 35661192 35661232 41 GCCTCCCAGTTCGCAGAGTCCCACAGTGCTAACCTTGATCT GCCTCCCAGTTCGCAGAGTCCGACAGTGCTAACCTTGATCT < 41bp 0.6224724801434 0.864612515510323 0.07026267 0.09552929 prediction 0.484280070733845 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661212 chr22:35661213 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_110585 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:35661206-35661231
64251 chr1 1421550 1421550 1 + C T READ 1421549 + 1421529 1421569 41 ACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACAT ACCAGGAACACCAAGAAGAACTGGGGCCTGTACAGGCACAT < 41bp 0.507920687049362 0.750032821440056 0.721041 0.75623834 prediction 0.484224268781388 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421549 chr1:1421550 nonsynonymous SNV 0.013 3 22 hm5C_associated_SNPs_110591 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:1421521-1421559
64251 chr5 176731056 176731056 1 + C A KIRC 176731052 + 176731032 176731072 41 GACCAAGTGTTCGCCGCCTTCTGGCAGCGGTACCCGAATCC GACCAAGTGTTCGCCGCCTTCTGGAAGCGGTACCCGAATCC < 41bp 0.684781971557652 0.926887716403922 0.20064157 0.69956636 prediction 0.484211489692541 Functional Gain - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176731052 chr5:176731056 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_110594 0 0 1 PRPF8 POSTAR2 ENCODE chr5:176731056-176731115
64251 chr19 48202003 48202003 1 + C G CESC 48202002 + 48201982 48202022 41 CTCCTGCCCTACCATGTCTACCAGGGCGCCCTCCCCTCCCC CTCCTGCCCTACCATGTCTACGAGGGCGCCCTCCCCTCCCC < 41bp 0.412217316275149 0.7420775061293 0.88412434 0.922292 prediction 0.4841550122586 Functional Gain - BICRA ENSG00000063169 CDS Human protein_coding chr19:48202002 chr19:48202003 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_110600 0 0 1 PCBP2 POSTAR2 ENCODE chr19:48201945-48202028
64251 chr19 13884586 13884586 1 + C G rs147089928 13884582 + 13884562 13884602 41 TCTGGGTTCAAGCGACTCTCCTGCCTCAGCCTCCCGAGTAG TCTGGGTTCAAGCGACTCTCCTGCGTCAGCCTCCCGAGTAG < 41bp 0.551751458445812 0.793824450259093 0.08869159 0.24850163 prediction 0.484145983626563 Functional Gain - MRI1 ENSG00000267633 ncRNA_intronic Human antisense chr19:13884582 chr19:13884586 . . 0 25 hm5C_associated_SNPs_110602 0 0 1 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr19:13884583-13884604
64251 chr1 116933447 116933447 1 + C T SKCM 116933446 + 116933426 116933466 41 AGCTACCTGGCTTGCTCTGTCCAGAATTGCAGGTCTTTGTA AGCTACCTGGCTTGCTCTGTCTAGAATTGCAGGTCTTTGTA < 41bp 0.550372848828292 0.792440271864235 0.5164566 0.3669585 prediction 0.484134846071885 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116933446 chr1:116933447 synonymous SNV . 0 22 hm5C_associated_SNPs_110605 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:116933405-116933480
64251 chr19 11040197 11040197 1 + C T SKCM 11040196 + 11040176 11040216 41 CGCATTTGCGGGTGGTCGGGCCCCAGCAGCTGCATTCCGAG CGCATTTGCGGGTGGTCGGGCTCCAGCAGCTGCATTCCGAG < 41bp 0.522579100809624 0.764641620584439 0.23219225 0.9101548 prediction 0.484125039549629 Functional Gain - TIMM29 ENSG00000142444 CDS Human protein_coding chr19:11040196 chr19:11040197 nonsynonymous SNV 0.071 0 22 hm5C_associated_SNPs_110606 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:11040180-11040200
64251 chr19 7987105 7987105 1 + T C COAD 7987103 + 7987083 7987123 41 CCAGGACTCCTGACCCTGCCCCTGAGAAACCTTCTGAGTCG CCAGGACTCCTGACCCTGCCCCCGAGAAACCTTCTGAGTCG < 41bp 0.542632799633719 0.784694906742238 0.14622068 0.18832389 prediction 0.484124214217039 Functional Gain - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987103 chr19:7987105 synonymous SNV . 0 23 hm5C_associated_SNPs_110607 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:7987067-7987117
64251 chr6 31526056 31526056 1 + C G rs200733771 31526055 + 31526035 31526075 41 GCGCAGGAGGCTCTAGGGGACCGAGAACCCAAGCCAACCAG GCGCAGGAGGCTCTAGGGGACGGAGAACCCAAGCCAACCAG < 41bp 0.553463290499736 0.795523468024371 0.26208866 0.8315973 prediction 0.48412035504927 Functional Gain - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31526055 chr6:31526056 nonsynonymous SNV 0.732 0 22 hm5C_associated_SNPs_110608 0 0 1 PPIG POSTAR2 ENCODE chr6:31526013-31526071
64251 chr2 242758167 242758167 1 + C A LUSC 242758166 + 242758146 242758186 41 CTGGGTGATCTACGAGGGCCCCAGCGGCTACTCCGACCTGG CTGGGTGATCTACGAGGGCCCAAGCGGCTACTCCGACCTGG < 41bp 0.520788236721498 0.762838461424455 0.7721486 0.83881986 prediction 0.484100449405914 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758166 chr2:242758167 synonymous SNV . 0 22 hm5C_associated_SNPs_110611 0 0 1 DDX55 POSTAR2 ENCODE chr2:242758107-242758202
64251 chr1 201970811 201970811 1 + C T SKCM 201970810 + 201970790 201970830 41 TATGTGCATGAATTCAAATTCCGAAGCATCTTAGCCGATGA TATGTGCATGAATTCAAATTCTGAAGCATCTTAGCCGATGA < 41bp 0.487322320732604 0.74203488569233 0.2919008 0.27664495 prediction 0.484069771384661 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201970810 chr1:201970811 stopgain 0.942 0 22 hm5C_associated_SNPs_110616 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201970799-201970823
64251 chr4 1807787 1807787 1 + A G KIRP 1807784 + 1807764 1807804 41 CACCCCTTCCCCAGTGCATCCACAGGGACCTGGCTGCCCGC CACCCCTTCCCCAGTGCATCCACGGGGACCTGGCTGCCCGC < 41bp 0.506239370562275 0.748272961493932 0.12149185 0.76531124 prediction 0.484067181863315 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807784 chr4:1807787 nonsynonymous SNV 0.940 5 24 hm5C_associated_SNPs_110617 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1807779-1807804
64251 chr8 30601740 30601740 1 + C A COAD 30601736 + 30601716 30601756 41 CGTGGGGTTGTTGGCATTTTCTTCCTCTCTGCTGTCCCCCT CGTGGGGTTGTTGGCATTTTCTTCATCTCTGCTGTCCCCCT < 41bp 0.363514397175611 0.742033003825309 0.28258383 0.30699432 prediction 0.484066007650619 Functional Gain - UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30601736 chr8:30601740 . 0.838 2 25 hm5C_associated_SNPs_110618 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr8:30601740-30601741
64251 chr1 110566124 110566124 1 + C A rs551336444 110566120 + 110566100 110566140 41 ACATTCACCTGCCCTCTGACCTGCCCCTTGATCCCATATCT ACATTCACCTGCCCTCTGACCTGCACCTTGATCCCATATCT < 41bp 0.387956137651787 0.742024258918779 0.10063508 0.06287488 prediction 0.484048517837558 Functional Gain - AHCYL1 ENSG00000168710 UTR3 Human protein_coding chr1:110566120 chr1:110566124 . . 0 25 hm5C_associated_SNPs_110621 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr1:110566120-110566140
64251 chr11 125780320 125780320 1 + T A LUAD 125780316 + 125780296 125780336 41 AAACTGGCCGTGTGGTTGAGCAGATGGGAAAATTCTGTGTG AAACTGGCCGTGTGGTTGAGCAGAAGGGAAAATTCTGTGTG < 41bp 0.619127994625127 0.861150919009017 0.40016836 0.30148697 prediction 0.48404584876778 Functional Gain - DDX25 ENSG00000109832 CDS Human protein_coding chr11:125780316 chr11:125780320 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_110623 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125780297-125780325
64251 chr7 129091522 129091522 1 + C T SKCM 129091521 + 129091501 129091541 41 TATATAATGGGACTCTTGGACCGGCTAGAGGTGGTCAGTAG TATATAATGGGACTCTTGGACTGGCTAGAGGTGGTCAGTAG < 41bp 0.50002505179243 0.742043204361463 0.24334377 0.20185262 prediction 0.484036305138066 Functional Gain - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129091521 chr7:129091522 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_110626 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:129091505-129091524
64251 chr3 45720042 45720042 1 + T G rs138713044 45720039 + 45720019 45720059 41 ACATCCCTGAGGCCAGAGGTCAGTACCCTTTGGTATTTCGA ACATCCCTGAGGCCAGAGGTCAGGACCCTTTGGTATTTCGA < 41bp 0.363758238561223 0.74200901259277 0.20410207 0.7044636 prediction 0.48401802518554 Functional Gain - LIMD1-AS1 ENSG00000144791 UTR3 Human protein_coding chr3:45720039 chr3:45720042 . . 0 24 hm5C_associated_SNPs_110627 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr3:45720041-45720078
64251 chr4 951791 951791 1 + T C rs80114247 951789 + 951769 951809 41 GTGCGCAAGGCCACGCGGGCCATGGGGCTGCTGAACACGCT GTGCGCAAGGCCACGCGGGCCACGGGGCTGCTGAACACGCT < 41bp 0.523181049052935 0.765182146006479 0.41575783 0.4241764 prediction 0.484002193907089 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951789 chr4:951791 nonsynonymous SNV 0.840 4 23 hm5C_associated_SNPs_110628 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:951787-951816
64251 chr7 99054161 99054161 1 + C G rs200727811 99054160 + 99054140 99054180 41 CTCCGAGCAGCCCGGGGGCCCCGCTGTTGGGAGTGTGCATT CTCCGAGCAGCCCGGGGGCCCGGCTGTTGGGAGTGTGCATT < 41bp 0.430221414924273 0.741995611205981 0.13628846 0.36289084 prediction 0.483991222411961 Functional Gain - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99054160 chr7:99054161 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_110630 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:99054154-99054179
64251 chr16 31131695 31131695 1 + C T LUSC 31131694 + 31131674 31131714 41 GACGAGTGGGTAGACAAGAACCGGCTGGCGCTGACCAAGAC GACGAGTGGGTAGACAAGAACTGGCTGGCGCTGACCAAGAC < 41bp 0.524724429524386 0.766719289965625 0.71782637 0.61644965 prediction 0.483989720882478 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31131694 chr16:31131695 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_110631 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:31131660-31131784
64251 chr10 105203783 105203783 1 + C T COAD 105203782 + 105203762 105203802 41 AGCCAGGCTGCAGCCAGTCACCGCGTGCTGCAGCGAGCCCT AGCCAGGCTGCAGCCAGTCACTGCGTGCTGCAGCGAGCCCT < 41bp 0.523746078198705 0.765727453190927 0.72390807 0.37677523 prediction 0.483962749984444 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105203782 chr10:105203783 nonsynonymous SNV 0.611 1 22 hm5C_associated_SNPs_110634 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:105203780-105203800
64251 chr22 21998374 21998374 1 + C A LIHC 21998373 + 21998353 21998393 41 GCATGAGGTCCACGGCATGCCCAGTGCCAACACGCACAATA GCATGAGGTCCACGGCATGCCAAGTGCCAACACGCACAATA < 41bp 0.495872663251705 0.741978408152303 0.121923 0.27164412 prediction 0.483956816304605 Functional Gain - SDF2L1 ENSG00000128228 CDS Human protein_coding chr22:21998373 chr22:21998374 synonymous SNV . 0 22 hm5C_associated_SNPs_110635 0 0 1 DHX30 POSTAR2 ENCODE chr22:21998365-21998387
64251 chrX 149905801 149905801 1 + C T UCEC 149905800 + 149905780 149905820 41 CATTGCAGCGACGGTTGGGACCGAACAGCCCAGCTCACATC CATTGCAGCGACGGTTGGGACTGAACAGCCCAGCTCACATC < 41bp 0.484147893559983 0.74196517625152 0.06973949 0.12876266 prediction 0.483930352503039 Functional Gain - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149905800 chrX:149905801 stopgain 0.998 1 22 hm5C_associated_SNPs_110640 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:149905774-149905801
64251 chr20 21349207 21349207 1 + C T LUSC 21349206 + 21349186 21349226 41 CCGCTTTTGAGAGGACAAGCCCAGATTCCAAAACTTATGTC CCGCTTTTGAGAGGACAAGCCTAGATTCCAAAACTTATGTC < 41bp 0.48796282795896 0.741962599769884 0.06556663 0.19890204 prediction 0.483925199539768 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21349206 chr20:21349207 stopgain 0.998 0 22 hm5C_associated_SNPs_110641 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:21349199-21349224
64251 chr17 16285491 16285491 1 + C T BLCA 16285490 + 16285470 16285510 41 CCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTG CCTGACCGGCAAGACCATCACTCTGGAAGTGGAGCCCAGTG < 41bp 0.525045288632943 0.766991156510616 0.08120087 0.095935464 prediction 0.483891735755348 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285490 chr17:16285491 synonymous SNV . 0 22 hm5C_associated_SNPs_110645 0 0 3 GRWD1 POSTAR2 ENCODE chr17:16285466-16285507
64251 chr7 74015470 74015470 1 + C T SKCM 74015469 + 74015449 74015489 41 CCTCTTCCTCGTCCTCTAACCCGGATTCAGTGGCATCGGCC CCTCTTCCTCGTCCTCTAACCTGGATTCAGTGGCATCGGCC < 41bp 0.511964621598114 0.753909082459439 0.8915177 0.8900401 prediction 0.48388892172265 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:74015469 chr7:74015470 nonsynonymous SNV 0.983 0 22 hm5C_associated_SNPs_110646 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr7:74015453-74015472
64251 chr2 85852780 85852780 1 + T C STAD 85852778 + 85852758 85852798 41 GGTATTGTGGGACTGAATAACATAAAGGCCAATGATTATGC GGTATTGTGGGACTGAATAACACAAAGGCCAATGATTATGC < 41bp 0.594414947273703 0.836352535423971 0.29372936 0.2462543 prediction 0.483875176300536 Functional Gain - USP39 ENSG00000168883 CDS Human protein_coding chr2:85852778 chr2:85852780 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_110649 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:85852760-85852780
64251 chr1 90048427 90048427 1 + T C UCEC 90048425 + 90048405 90048445 41 TGTGCCGTGCCTTGGGACATCCTGAAAGCCAGCATGAACAC TGTGCCGTGCCTTGGGACATCCCGAAAGCCAGCATGAACAC < 41bp 0.589072777373306 0.83100597385261 0.098431796 0.2756884 prediction 0.483866392958608 Functional Gain - LRRC8B ENSG00000197147 CDS Human protein_coding chr1:90048425 chr1:90048427 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_110651 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:90048398-90048428
64251 chr9 96440358 96440358 1 + C A rs143119371 96440357 + 96440337 96440377 41 AGCCCCAGAGTCAGAGCTGGCCACAGGCTGGCAGCCTCCAG AGCCCCAGAGTCAGAGCTGGCAACAGGCTGGCAGCCTCCAG < 41bp 0.483487088019932 0.741893211318737 0.5054242 0.7408915 prediction 0.483786422637474 Functional Gain - PHF2 ENSG00000197724 UTR3 Human protein_coding chr9:96440357 chr9:96440358 . . 0 22 hm5C_associated_SNPs_110657 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:96440350-96440382
64251 chr12 50157088 50157088 1 + A G rs376195970 50157085 + 50157065 50157105 41 CCTCATTGTTGTTTGGTATGCGCACAGTTCCTGTGGGACTG CCTCATTGTTGTTTGGTATGCGCGCAGTTCCTGTGGGACTG < 41bp 0.511220571792597 0.753098775080844 0.12220976 0.23461977 prediction 0.483756406576494 Functional Gain - TMBIM6 ENSG00000139644 UTR3 Human protein_coding chr12:50157085 chr12:50157088 . . 0 24 hm5C_associated_SNPs_110660 0 0 50 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:50156971-50157121
64251 chr19 8536272 8536272 1 + C T STAD 8536271 + 8536251 8536291 41 CAACCCATTGATGCCAATCACCTGAATAAAGGCATCGGAAT CAACCCATTGATGCCAATCACTTGAATAAAGGCATCGGAAT < 41bp 0.483256690307618 0.741876250257092 0.2732299 0.2985059 prediction 0.483752500514184 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8536271 chr19:8536272 synonymous SNV . 0 22 hm5C_associated_SNPs_110661 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:8536220-8536280
64251 chr10 22618336 22618336 1 + T G BRCA 22618334 + 22618314 22618354 41 CCAGTACTCCAGTGCAGTCTCCTCATCCACAGTTTCCTCAC CCAGTACTCCAGTGCAGTCTCCGCATCCACAGTTTCCTCAC < 41bp 0.625100577112539 0.866954883018423 0.23757496 0.29085362 prediction 0.483708611811769 Functional Gain - BMI1;COMMD3-BMI1 ENSG00000168283;ENSG00000269897 CDS Human other chr10:22618334 chr10:22618336 synonymous SNV . 0 23 hm5C_associated_SNPs_110666 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:22618309-22618362
64251 chr6 155054821 155054821 1 + C G rs555139158 155054820 + 155054800 155054840 41 TCCCTAGAACGGCGCTCCCCCCGCCCTAGCGGCCATGCCGG TCCCTAGAACGGCGCTCCCCCGGCCCTAGCGGCCATGCCGG < 41bp 0.485518857508712 0.741839518088764 0.33164823 0.61300856 prediction 0.483679036177527 Functional Gain - SCAF8 ENSG00000213079 UTR5 Human protein_coding chr6:155054820 chr6:155054821 . . 0 22 hm5C_associated_SNPs_110670 0 0 2 AKAP8L POSTAR2 ENCODE chr6:155054804-155054822
64251 chr16 29706123 29706123 1 + C A LUSC 29706122 + 29706102 29706142 41 CGGCGCTGTGGGCCAAATCCCCTGGGGTACTGGCAGGGCAG CGGCGCTGTGGGCCAAATCCCATGGGGTACTGGCAGGGCAG < 41bp 0.478750335169339 0.741826394098061 0.8376784 0.88429785 prediction 0.483652788196122 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706122 chr16:29706123 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_110672 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr16:29706097-29706133
64251 chr6 138200249 138200249 1 + C A PAAD 138200245 + 138200225 138200265 41 CCTCCAGCCTCAGCACCAGCCTCCCTCCTTCCTGTCACCAG CCTCCAGCCTCAGCACCAGCCTCCATCCTTCCTGTCACCAG < 41bp 0.29665915702028 0.741821354316982 0.1525091 0.95497954 prediction 0.483642708633965 Functional Gain - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200245 chr6:138200249 nonsynonymous SNV 0.048 1 25 hm5C_associated_SNPs_110673 0 0 1 RBM15 POSTAR2 ENCODE chr6:138200184-138200249
64251 chr4 57796107 57796107 1 + T G UCEC 57796105 + 57796085 57796125 41 TTCACAATGGGCCTAAACCTCTTAATTGCCCACACTGTGAT TTCACAATGGGCCTAAACCTCTGAATTGCCCACACTGTGAT < 41bp 0.547665970635465 0.789472933940128 0.056723893 0.18519202 prediction 0.483613926609326 Functional Gain - REST ENSG00000084093 CDS Human protein_coding chr4:57796105 chr4:57796107 synonymous SNV . 0 23 hm5C_associated_SNPs_110675 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr4:57796075-57796112
64251 chr15 85188775 85188775 1 - G A rs4842982 85188776 - 85188756 85188796 41 CTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAG CTCAGTCCAGTGCCCAGTATCTGTACCTAGCCCTGACCCAG < 41bp 0.515733669296234 0.7575374385999 0.26247644 0.1987845 prediction 0.483607538607332 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188776 chr15:85188775 synonymous SNV . 0 22 hm5C_associated_SNPs_110678 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:85188741-85188778
64251 chr16 3707763 3707763 1 + C A rs201975812 3707762 + 3707742 3707782 41 GCTCCGAGGCGCCGTTGTTCCCGACTCGGCTCTTCCCTTTA GCTCCGAGGCGCCGTTGTTCCAGACTCGGCTCTTCCCTTTA < 41bp 0.477961199236117 0.741802822419261 0.016403407 0.3792259 prediction 0.483605644838521 Functional Gain - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707762 chr16:3707763 synonymous SNV . 0 22 hm5C_associated_SNPs_110680 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:3707760-3707789
64251 chr3 193855974 193855974 1 + C G THYM 193855970 + 193855950 193855990 41 CCCCAACGCAGTGTCACCTTCCAGCGGCCCCTCGCTTACGG CCCCAACGCAGTGTCACCTTCCAGGGGCCCCTCGCTTACGG < 41bp 0.468342872902673 0.741799274681922 0.6987509 0.9331852 prediction 0.483598549363845 Functional Gain - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855970 chr3:193855974 nonsynonymous SNV 0.993 0 25 hm5C_associated_SNPs_110681 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr3:193855957-193855983
64251 chr12 27800727 27800727 1 + T C BLCA 27800725 + 27800705 27800745 41 TTCGAGATTTGGAGTTTTGTCTTGAAGAGCACAGAGAGAAG TTCGAGATTTGGAGTTTTGTCTCGAAGAGCACAGAGAGAAG < 41bp 0.598059426119661 0.839857729698252 0.12689641 0.9071597 prediction 0.483596607157182 Functional Gain - PPFIBP1 ENSG00000110841 CDS Human protein_coding chr12:27800725 chr12:27800727 synonymous SNV . 0 23 hm5C_associated_SNPs_110682 0 0 2 BUD13 POSTAR2 ENCODE chr12:27800722-27800813
64251 chr17 4701090 4701090 1 + C G UCEC 4701089 + 4701069 4701109 41 TCATCATCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTC TCATCATCGCAGGCTGGGACCGTCAAGAAGGAGGGCAGGTC < 41bp 0.422112144551236 0.741770648548144 0.41200036 0.26157662 prediction 0.483541297096289 Functional Gain - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4701089 chr17:4701090 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_110689 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:4701062-4701095
64251 chr17 38320163 38320163 1 + C T SKCM 38320162 + 38320142 38320182 41 CATTGAGAAGAAATCCTATTCCCGGGCAAGAAGAACTCGAA CATTGAGAAGAAATCCTATTCTCGGGCAAGAAGAACTCGAA < 41bp 0.5507387834765 0.792505782841047 0.47547448 0.18298954 prediction 0.483533998729094 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38320162 chr17:38320163 synonymous SNV . 0 22 hm5C_associated_SNPs_110690 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38320134-38320195
64251 chr14 66082952 66082952 1 + C A UCEC 66082951 + 66082931 66082971 41 CTGGGGAAGGATCATGAAATCCTGAGGAGGAGGATTGAAAA CTGGGGAAGGATCATGAAATCATGAGGAGGAGGATTGAAAA < 41bp 0.508904085160815 0.750667390838374 0.27456427 0.22505683 prediction 0.483526611355117 Functional Gain - FUT8 ENSG00000033170 CDS Human protein_coding chr14:66082951 chr14:66082952 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_110691 0 0 3 LIN28A POSTAR2 GSE39873,GSM980593 chr14:66082940-66082960
64251 chr5 140476417 140476417 1 + C A LUAD 140476413 + 140476393 140476433 41 GCTGCTCCCGGAGGCGGCACCGGCCCAGGCCCAGGCCGACT GCTGCTCCCGGAGGCGGCACCGGCACAGGCCCAGGCCGACT < 41bp 0.67624171402378 0.91800058701424 0.81336933 0.87611234 prediction 0.483517745980919 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476413 chr5:140476417 synonymous SNV . 0 25 hm5C_associated_SNPs_110693 0 0 1 SND1 POSTAR2 ENCODE chr5:140476365-140476432
64251 chr17 41599455 41599455 1 + C T GBM 41599454 + 41599434 41599474 41 TCCTGTGGCAAGTCCACAGTCCGAGTGCAGAAGGCCATCTG TCCTGTGGCAAGTCCACAGTCTGAGTGCAGAAGGCCATCTG < 41bp 0.516512920167603 0.758271773800659 0.6986277 0.3052011 prediction 0.483517707266112 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41599454 chr17:41599455 stopgain 1.000 1 22 hm5C_associated_SNPs_110694 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:41599442-41599464
64251 chr9 129456075 129456075 1 + C A rs544649941 129456074 + 129456054 129456094 41 GCAGCAGGAGCAGCAGAACTCCCAGCGGCTGGGCCAGGGTG GCAGCAGGAGCAGCAGAACTCACAGCGGCTGGGCCAGGGTG < 41bp 0.553606178695909 0.795356301219796 0.54943055 0.8192639 prediction 0.483500245047774 Functional Gain - LMX1B ENSG00000136944 CDS Human protein_coding chr9:129456074 chr9:129456075 synonymous SNV . 0 22 hm5C_associated_SNPs_110697 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:129456070-129456096
64251 chr15 80423582 80423582 1 + C T UCEC 80423581 + 80423561 80423601 41 AAAGCAAGTCTCTTGAAAAACCGAAACAAAAAAAGAATCGC AAAGCAAGTCTCTTGAAAAACTGAAACAAAAAAAGAATCGC < 41bp 0.519100692034743 0.760848642982464 0.80797035 0.8686522 prediction 0.483495901895442 Functional Gain - ZFAND6 ENSG00000086666 CDS Human protein_coding chr15:80423581 chr15:80423582 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_110698 0 0 1 BUD13 POSTAR2 ENCODE chr15:80423483-80423657
64251 chr16 57415980 57415980 1 + C A HNSC 57415979 + 57415959 57415999 41 ACAGGCTGTTCTGTGCCGACCCGAAGGAGCAATGGGTCAAG ACAGGCTGTTCTGTGCCGACCAGAAGGAGCAATGGGTCAAG < 41bp 0.557085159127036 0.79882728977861 0.04394996 0.2448233 prediction 0.483484261303148 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57415979 chr16:57415980 nonsynonymous SNV 0.526 4 22 hm5C_associated_SNPs_110700 0 0 3 BUD13 POSTAR2 ENCODE chr16:57415924-57416000
64251 chr20 32436418 32436418 1 + C T SKCM 32436417 + 32436397 32436437 41 GCTCAAGAACATGGGCTATGCCGCCAAGGCCATGAAGGCGG GCTCAAGAACATGGGCTATGCTGCCAAGGCCATGAAGGCGG < 41bp 0.507578418761784 0.749318166759631 0.1823048 0.16399696 prediction 0.483479495995694 Functional Gain - CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32436417 chr20:32436418 synonymous SNV . 0 22 hm5C_associated_SNPs_110701 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:32436406-32436423
64251 chr7 150743682 150743682 1 + C G rs145666848 150743681 + 150743661 150743701 41 CTTCCCCTATCCAGCCACATCCAGGCTGTGGGACTACACGG CTTCCCCTATCCAGCCACATCGAGGCTGTGGGACTACACGG < 41bp 0.595619888663928 0.837351357079449 0.8758429 0.9165101 prediction 0.483462936831041 Functional Gain - ABCB8 ENSG00000197150 UTR3 Human protein_coding chr7:150743681 chr7:150743682 . . 0 22 hm5C_associated_SNPs_110704 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:150743682-150743706
64251 chr2 54856703 54856703 1 + C G rs550168582 54856702 + 54856682 54856722 41 ACGAACAAGCCAGCGCCCTCCCCCAGGAGCATGCCGAGTCT ACGAACAAGCCAGCGCCCTCCGCCAGGAGCATGCCGAGTCT < 41bp 0.441422362050406 0.741724753382276 0.16934204 0.3575731 prediction 0.483449506764553 Functional Gain - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54856702 chr2:54856703 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_110705 0 0 6 FMR1 POSTAR2 ENCODE chr2:54856664-54856765
64251 chr19 581373 581373 1 + A G LUAD 581370 + 581350 581390 41 GAGTTCCTCGCAGGGCCGGTCAGAGCTACACATTGAGAACC GAGTTCCTCGCAGGGCCGGTCAGGGCTACACATTGAGAACC < 41bp 0.498186788070298 0.741718591384168 0.8302841 0.9263743 prediction 0.483437182768337 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:581370 chr19:581373 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_110708 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:581340-581378
64251 chr8 22472465 22472465 1 + C T SKCM 22472464 + 22472444 22472484 41 GTGCTGGTGCGTACCGCCATCCGCTGTGCGCAGGCCCAGAC GTGCTGGTGCGTACCGCCATCTGCTGTGCGCAGGCCCAGAC < 41bp 0.551312605347862 0.793017309432616 0.14986107 0.20258284 prediction 0.48340940816951 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22472464 chr8:22472465 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_110714 0 0 7 FXR2 POSTAR2 GSE39682,GSM977620 chr8:22472450-22472473
64251 chr16 28914676 28914676 1 + C T GBM 28914675 + 28914655 28914695 41 GCTCCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCTCA GCTCCGGGCCCTGGACCTCACTCAGTGGCTCATGGTCCTCA < 41bp 0.485627300678491 0.741686037191255 0.20707548 0.2780375 prediction 0.483372074382509 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28914675 chr16:28914676 synonymous SNV . 0 22 hm5C_associated_SNPs_110715 0 0 2 GRWD1 POSTAR2 ENCODE chr16:28914642-28914744
64251 chr19 44777697 44777697 1 + T C UCEC 44777695 + 44777675 44777715 41 AATGTTGAGTACGGGAAGGGCATAGGTTACAGCTCAGGGCT AATGTTGAGTACGGGAAGGGCACAGGTTACAGCTCAGGGCT < 41bp 0.512384573166587 0.75406560065662 0.2750737 0.27183414 prediction 0.483362054980067 Functional Gain - ZNF233 ENSG00000159915 CDS Human protein_coding chr19:44777695 chr19:44777697 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_110716 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr19:44777676-44777706
64251 chr6 71298586 71298586 1 + T A rs141029330 71298582 + 71298562 71298602 41 TGGCTTTGGAAGAAAATATGCTGCTGTAAATTAGGAAAGGG TGGCTTTGGAAGAAAATATGCTGCAGTAAATTAGGAAAGGG < 41bp 0.54982940338446 0.791508368664618 0.0858382 0.051712632 prediction 0.483357930560316 Functional Gain - SDHAF4 ENSG00000154079 UTR3 Human protein_coding chr6:71298582 chr6:71298586 . . 0 25 hm5C_associated_SNPs_110717 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr6:71298573-71298595
64251 chr16 223497 223497 1 + C A COAD 223496 + 223476 223516 41 AAGCCACTGCCTGCTGGTGACCCTGGCCGCCCACCTCCCCG AAGCCACTGCCTGCTGGTGACACTGGCCGCCCACCTCCCCG < 41bp 0.489818467261932 0.741672947191584 0.29416734 0.35828477 prediction 0.483345894383167 Functional Gain - HBA2 ENSG00000188536 CDS Human protein_coding chr16:223496 chr16:223497 synonymous SNV . 0 22 hm5C_associated_SNPs_110726 0 0 3 DDX55 POSTAR2 ENCODE chr16:223489-223542
64251 chr8 21960076 21960076 1 + C A UCEC 21960075 + 21960055 21960095 41 TGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTG TGCAGAGAATCCAGAGGGTACACCAGTTCCCAGGCAAGCTG < 41bp 0.485960642860114 0.74167284989092 0.1095784 0.25739133 prediction 0.48334569978184 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21960075 chr8:21960076 nonsynonymous SNV 0.976 4 22 hm5C_associated_SNPs_110727 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:21960066-21960111
64251 chr19 41725332 41725332 1 + C A rs563334837 41725331 + 41725311 41725351 41 GCCCCAGGATGGGCAGGGTCCCGCTGGCCTGGTGCTTGGCG GCCCCAGGATGGGCAGGGTCCAGCTGGCCTGGTGCTTGGCG < 41bp 0.492385894912689 0.741666899484734 0.8122728 0.8843541 prediction 0.483333798969468 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41725331 chr19:41725332 nonsynonymous SNV 0.574 1 22 hm5C_associated_SNPs_110729 0 0 2 DDX3X POSTAR2 ENCODE chr19:41725297-41725383
64251 chrX 100088290 100088290 1 + T C UCEC 100088288 + 100088268 100088308 41 AGGCCCGTGCGATGGAAGCTCGTGCAATGGAGGCCCGAGCG AGGCCCGTGCGATGGAAGCTCGCGCAATGGAGGCCCGAGCG < 41bp 0.5573134863778 0.798977451753745 0.58093375 0.70229965 prediction 0.483327930751889 Functional Gain - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088288 chrX:100088290 synonymous SNV . 0 23 hm5C_associated_SNPs_110730 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:100088278-100088311
64251 chr12 58000752 58000752 1 + C T LUAD 58000751 + 58000731 58000771 41 CTGAGCAAAGAGACCCCAGCCCGGCTGGCCCGGCTTCGGGA CTGAGCAAAGAGACCCCAGCCTGGCTGGCCCGGCTTCGGGA < 41bp 0.499519310547832 0.741638672754987 0.112665474 0.086310476 prediction 0.483277345509975 Functional Gain - DTX3 ENSG00000178498 CDS Human protein_coding chr12:58000751 chr12:58000752 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_110735 0 0 1 TBRG4 POSTAR2 ENCODE chr12:58000743-58000786
64251 chr3 52444872 52444872 1 + C G rs566829817 52444868 + 52444848 52444888 41 CGGCCCGGCCCTGCACTGGCCGCCCGGCAGGCGCGACATGA CGGCCCGGCCCTGCACTGGCCGCCGGGCAGGCGCGACATGA < 41bp 0.568732775637719 0.810364265427534 0.19947386 0.53900313 prediction 0.48326297957963 Functional Gain - PHF7 ENSG00000010318 UTR5 Human protein_coding chr3:52444868 chr3:52444872 . . 0 25 hm5C_associated_SNPs_110736 0 0 1 DDX3X POSTAR2 ENCODE chr3:52444860-52444919
64251 chr21 46624478 46624478 1 + T C CESC 46624476 + 46624456 46624496 41 TCTTCTCCCTCCAGCTGGAACGTGGTGGGCATCCAGGGATC TCTTCTCCCTCCAGCTGGAACGCGGTGGGCATCCAGGGATC < 41bp 0.478414454273766 0.741625059172535 0.8829735 0.8713035 prediction 0.48325011834507 Functional Gain - ADARB1 ENSG00000197381 CDS Human protein_coding chr21:46624476 chr21:46624478 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_110739 0 0 2 BUD13 POSTAR2 ENCODE chr21:46624436-46624502
64251 chr13 113765066 113765066 1 + C A UCEC 113765065 + 113765045 113765085 41 CGCCGGCGCGCCAACGCGTTCCTGGAGGAGCTGCGGCCGGG CGCCGGCGCGCCAACGCGTTCATGGAGGAGCTGCGGCCGGG < 41bp 0.482744476066229 0.741625036098081 0.4361295 0.903926 prediction 0.483250072196163 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113765065 chr13:113765066 nonsynonymous SNV 0.474 2 22 hm5C_associated_SNPs_110740 0 0 3 EFTUD2 POSTAR2 ENCODE chr13:113764989-113765066
64251 chr11 47594600 47594600 1 + C G GBM 47594599 + 47594579 47594619 41 TCCCCCTTTTTATATCGGTCCCGGAAGACATAGATGCTCCC TCCCCCTTTTTATATCGGTCCGGGAAGACATAGATGCTCCC < 41bp 0.471542827470713 0.741595888703543 0.24671334 0.51304835 prediction 0.483191777407087 Functional Gain - KBTBD4 ENSG00000123444 CDS Human protein_coding chr11:47594599 chr11:47594600 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_110746 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:47594575-47594601
64251 chr2 97020058 97020058 1 + C A STAD 97020054 + 97020034 97020074 41 CTTTGATGCCAACGATGAACCTGACCACACCGCAGTTGGGG CTTTGATGCCAACGATGAACCTGAACACACCGCAGTTGGGG < 41bp 0.321368850957934 0.741594753657346 0.27425712 0.1909093 prediction 0.483189507314691 Functional Gain - NCAPH ENSG00000121152 CDS Human protein_coding chr2:97020054 chr2:97020058 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_110747 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:97020022-97020088
64251 chr1 41481849 41481849 1 + T C UCEC 41481847 + 41481827 41481867 41 TGCTGGAGCTGCTCCTTCTCCATCATCAGCGCCTTCATCTT TGCTGGAGCTGCTCCTTCTCCACCATCAGCGCCTTCATCTT < 41bp 0.535605085127112 0.777197892772364 0.06825584 0.06782088 prediction 0.483185615290503 Functional Gain - SLFNL1 ENSG00000171790 CDS Human protein_coding chr1:41481847 chr1:41481849 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_110748 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:41481843-41481881
64251 chr12 109959007 109959007 1 + C T PAAD 109959006 + 109958986 109959026 41 CACGCCATGAAGGGGGTCATCCGTGTGAAGTTTGTCAATGA CACGCCATGAAGGGGGTCATCTGTGTGAAGTTTGTCAATGA < 41bp 0.495426312180719 0.741591227518026 0.38290793 0.37783897 prediction 0.483182455036051 Functional Gain - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109959006 chr12:109959007 nonsynonymous SNV 0.969 4 22 hm5C_associated_SNPs_110750 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:109958995-109959019
64251 chr17 1637068 1637068 1 + C A rs111943038 1637067 + 1637047 1637087 41 TGACTCTCGGCCTGAGAACCCCGGACCACTGGGCCCCATCT TGACTCTCGGCCTGAGAACCCAGGACCACTGGGCCCCATCT < 41bp 0.539777061935251 0.781361589378958 0.88625956 0.91003615 prediction 0.483169054887415 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1637067 chr17:1637068 synonymous SNV . 0 22 hm5C_associated_SNPs_110751 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:1637031-1637076
64251 chr19 56204341 56204341 1 + C T SKCM 56204340 + 56204320 56204360 41 CCGGGGGATTCGACACGGAGCCCGACGAGTTCTCTGACTTT CCGGGGGATTCGACACGGAGCTCGACGAGTTCTCTGACTTT < 41bp 0.49035031449622 0.741580773303858 0.08146775 0.18660438 prediction 0.483161546607716 Functional Gain - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56204340 chr19:56204341 nonsynonymous SNV 0.084 1 22 hm5C_associated_SNPs_110753 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr19:56204331-56204351
64251 chr1 233802452 233802452 1 + T C STAD 233802450 + 233802430 233802470 41 CTGACGGCTGTGGTCCAGCGCATCACCGTGCACGTCACCCG CTGACGGCTGTGGTCCAGCGCACCACCGTGCACGTCACCCG < 41bp 0.5641947675103 0.805762646009407 0.07136527 0.04433912 prediction 0.483135756998213 Functional Gain - KCNK1 ENSG00000135750 CDS Human protein_coding chr1:233802450 chr1:233802452 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_110761 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:233802451-233802452
64251 chr1 10239548 10239548 1 + C A UCEC 10239544 + 10239524 10239564 41 ACCATCATGGACCGCTCCATCATCCTGCGGCACCTGCTCAA ACCATCATGGACCGCTCCATCATCATGCGGCACCTGCTCAA < 41bp 0.325816311277123 0.74155303910602 0.027963549 0.02358365 prediction 0.483106078212039 Functional Gain - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10239544 chr1:10239548 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_110767 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:10239521-10239550
64251 chr3 122128689 122128689 1 + C G rs116026640 122128688 + 122128668 122128708 41 AAACAGAGTAGCAGAGGTATCCGTGTTGGCTGGATTTTGAA AAACAGAGTAGCAGAGGTATCGGTGTTGGCTGGATTTTGAA < 41bp 0.445582684511729 0.741545208852862 0.4025789 0.82245195 prediction 0.483090417705725 Functional Gain - FAM162A ENSG00000114023 UTR3 Human protein_coding chr3:122128688 chr3:122128689 . . 0 22 hm5C_associated_SNPs_110772 0 0 18 TARDBP POSTAR2 DRA001158,DRS012386 chr3:122128646-122128745
64251 chr17 48453303 48453303 1 + C A rs148490439 48453302 + 48453282 48453322 41 CCAGGATGAAAGCCCAGAGGCCAGAGGAATGCTTAAAACAC CCAGGATGAAAGCCCAGAGGCAAGAGGAATGCTTAAAACAC < 41bp 0.547340327398546 0.788853630076135 0.34735638 0.38593134 prediction 0.483026605355179 Functional Gain - EME1 ENSG00000154920 CDS Human protein_coding chr17:48453302 chr17:48453303 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_110779 0 0 3 GRWD1 POSTAR2 ENCODE chr17:48453273-48453352
64251 chr19 19657133 19657133 1 + C A rs73924804 19657129 + 19657109 19657149 41 AGAAGCCGTCTCTGACTTCTCGTGCGTATTTTGACCCTGAT AGAAGCCGTCTCTGACTTCTCGTGAGTATTTTGACCCTGAT < 41bp 0.384996522111675 0.741502884898606 0.35747993 0.29207417 prediction 0.483005769797212 Functional Gain - CILP2 ENSG00000160161 UTR3 Human protein_coding chr19:19657129 chr19:19657133 . . 0 25 hm5C_associated_SNPs_110781 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:19657103-19657134
64251 chr19 35500853 35500853 1 + C T SKCM 35500852 + 35500832 35500872 41 GGAAACTGTTCAGCAAACTCCCCGAAGCAGAACGCCTCATT GGAAACTGTTCAGCAAACTCCTCGAAGCAGAACGCCTCATT < 41bp 0.56782697196509 0.809326811516653 0.3509311 0.90670455 prediction 0.482999679103126 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35500852 chr19:35500853 nonsynonymous SNV 0.622 5 22 hm5C_associated_SNPs_110783 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:35500806-35500867
64251 chr3 130694312 130694312 1 + T C UCEC 130694310 + 130694290 130694330 41 TACCAACAAGAGAAGGCACGCATGGGCTCAGCGGGACTCAG TACCAACAAGAGAAGGCACGCACGGGCTCAGCGGGACTCAG < 41bp 0.541652783504938 0.783149776052906 0.3635317 0.2636472 prediction 0.482993985095937 Functional Gain - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130694310 chr3:130694312 nonsynonymous SNV 0.982 3 23 hm5C_associated_SNPs_110784 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:130694297-130694333
64251 chr1 212459615 212459615 1 + C G rs75232123 212459614 + 212459594 212459634 41 GGCAGCCAGGCAGAGCTGCACCCGCTGCCCCAGCTCAAAGG GGCAGCCAGGCAGAGCTGCACGCGCTGCCCCAGCTCAAAGG < 41bp 0.616262754031539 0.857750448688307 0.13939106 0.14673805 prediction 0.482975389313536 Functional Gain - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212459614 chr1:212459615 nonsynonymous SNV 0.990 1 22 hm5C_associated_SNPs_110788 0 0 5 FMR1 POSTAR2 ENCODE chr1:212459547-212459632
64251 chr16 30680915 30680915 1 + C T SKCM 30680914 + 30680894 30680934 41 ACCTCCGCTTGTGCCCGCCCCCCGGCCCAGTTCCCCACCTA ACCTCCGCTTGTGCCCGCCCCTCGGCCCAGTTCCCCACCTA < 41bp 0.499911641812105 0.741477981280438 0.36099055 0.68091655 prediction 0.482955962560875 Functional Gain - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680914 chr16:30680915 synonymous SNV . 0 22 hm5C_associated_SNPs_110793 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:30680880-30680920
64251 chr16 57789767 57789767 1 + C T COAD 57789766 + 57789746 57789786 41 TGCACAGACGTCGGTGGACTCCGCTGTGGCCATCAACGACC TGCACAGACGTCGGTGGACTCTGCTGTGGCCATCAACGACC < 41bp 0.515438899634726 0.756907775456642 0.26452577 0.2753904 prediction 0.482937751643834 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57789766 chr16:57789767 synonymous SNV . 0 22 hm5C_associated_SNPs_110796 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:57789760-57789801
64251 chr19 37854552 37854552 1 + C A OV 37854548 + 37854528 37854568 41 GAGTGTGGGCAAGGCTTTAGCCGGCAGTCACACCTCATTAG GAGTGTGGGCAAGGCTTTAGCCGGAAGTCACACCTCATTAG < 41bp 0.673818321808543 0.915287016661466 0.8683644 0.6732295 prediction 0.482937389705847 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854548 chr19:37854552 nonsynonymous SNV 0.994 0 25 hm5C_associated_SNPs_110797 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:37854498-37854598
64251 chr18 72188347 72188347 1 + T C rs7577 72188345 + 72188325 72188365 41 ACTCCTAAATAAAAAGTAAACATGACACCTCTAAAAGAATC ACTCCTAAATAAAAAGTAAACACGACACCTCTAAAAGAATC < 41bp 0.504055850795618 0.745511075699955 0.07185295 0.050649345 prediction 0.482910449808673 Functional Gain - CNDP2 ENSG00000133313 UTR3 Human protein_coding chr18:72188345 chr18:72188347 . . 0 23 hm5C_associated_SNPs_110800 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:72188311-72188349
64251 chr20 56139555 56139555 1 + C T SKCM 56139554 + 56139534 56139574 41 ATAGGGGAACCTTGTGCCCACCCCAACTCGAGGTTCTGCAC ATAGGGGAACCTTGTGCCCACTCCAACTCGAGGTTCTGCAC < 41bp 0.573339531948639 0.81478589853934 0.035223037 0.94249964 prediction 0.482892733181404 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56139554 chr20:56139555 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_110801 0 0 2 GRWD1 POSTAR2 ENCODE chr20:56139537-56139562
64251 chr2 241514991 241514991 1 + C T UCEC 241514990 + 241514970 241515010 41 GACTCCTTCCTGAGCTTCTTCCCGGAGCTGAAGGAGCAGAG GACTCCTTCCTGAGCTTCTTCTCGGAGCTGAAGGAGCAGAG < 41bp 0.546241320653255 0.787684051342848 0.91210735 0.55351186 prediction 0.482885461379185 Functional Gain - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241514990 chr2:241514991 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_110803 0 0 4 BUD13 POSTAR2 ENCODE chr2:241514967-241515028
64251 chr17 45738534 45738534 1 + C A LUAD 45738533 + 45738513 45738553 41 TCTGTGAAGCCACACAGTGTCCAGATACGAGGGTAAGTGTG TCTGTGAAGCCACACAGTGTCAAGATACGAGGGTAAGTGTG < 41bp 0.546857805292834 0.788295497345992 0.3075785 0.57795787 prediction 0.482875384106316 Functional Gain - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45738533 chr17:45738534 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_110804 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:45738488-45738542
64251 chr17 79078475 79078475 1 + C T UCEC 79078474 + 79078454 79078494 41 ACCCTGCTGGTGCCTGAGGCCCGCGATGGCTGGCACTACGG ACCCTGCTGGTGCCTGAGGCCTGCGATGGCTGGCACTACGG < 41bp 0.489928462362363 0.741437365854057 0.18680003 0.1474362 prediction 0.482874731708113 Functional Gain - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79078474 chr17:79078475 nonsynonymous SNV 0.960 4 22 hm5C_associated_SNPs_110805 0 0 4 GRWD1 POSTAR2 ENCODE chr17:79078447-79078498
64251 chrX 48385628 48385628 1 + C T UCEC 48385627 + 48385607 48385647 41 TGGGTGGTGATCGCCTTTCTCCGCCAGCATCCCCTCCGCTT TGGGTGGTGATCGCCTTTCTCTGCCAGCATCCCCTCCGCTT < 41bp 0.506019672976793 0.74745691886173 0.35450318 0.19572043 prediction 0.482874491769874 Functional Gain - EBP ENSG00000147155 CDS Human protein_coding chrX:48385627 chrX:48385628 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_110806 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48385615-48385656
64251 chr22 30823266 30823266 1 + C T STAD 30823265 + 30823245 30823285 41 ATTCCGGGCTTCACCATCAACCGCGTGTGTGCTGCCTCTCT ATTCCGGGCTTCACCATCAACTGCGTGTGTGCTGCCTCTCT < 41bp 0.485860363469916 0.741432942680716 0.87769103 0.8301966 prediction 0.482865885361433 Functional Gain - MTFP1 ENSG00000242114;ENSG00000249590 CDS Human other chr22:30823265 chr22:30823266 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_110809 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr22:30823239-30823273
64251 chr22 38087272 38087272 1 + C T UCEC 38087271 + 38087251 38087291 41 GCCCAGGACTCCAAAAAGCCCCCAAGGGCCCCTCGTACCAG GCCCAGGACTCCAAAAAGCCCTCAAGGGCCCCTCGTACCAG < 41bp 0.542709813038235 0.784135246506066 0.05562815 0.030069888 prediction 0.482850866935662 Functional Gain - NOL12 ENSG00000100101 CDS Human protein_coding chr22:38087271 chr22:38087272 nonsynonymous SNV 0.774 1 22 hm5C_associated_SNPs_110812 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:38087268-38087316
64251 chr14 77579782 77579782 1 + C G LUSC 77579781 + 77579761 77579801 41 TCTTCAGGGCAGCAGCTCATCCCAGCTCCAGTCGTGGACTG TCTTCAGGGCAGCAGCTCATCGCAGCTCCAGTCGTGGACTG < 41bp 0.623591237940375 0.865001774695654 0.088760346 0.2827868 prediction 0.482821073510558 Functional Gain - CIPC ENSG00000198894 CDS Human protein_coding chr14:77579781 chr14:77579782 nonsynonymous SNV 0.896 1 22 hm5C_associated_SNPs_110817 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:77579765-77579804
64251 chr2 190328664 190328664 1 + C T SKCM 190328663 + 190328643 190328683 41 CACCTGCAGTTTTATTCTCTCCAGAGTGATAAACAGTTATA CACCTGCAGTTTTATTCTCTCTAGAGTGATAAACAGTTATA < 41bp 0.522555478628191 0.763954657623484 0.35008055 0.106372595 prediction 0.482798357990586 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190328663 chr2:190328664 stopgain 0.996 1 22 hm5C_associated_SNPs_110821 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:190328630-190328666
64251 chr12 2910371 2910371 1 + C G rs143021274 2910367 + 2910347 2910387 41 TGAATGACTTTGAACTGGCACGGGCTGATTTCCAGAAGGTC TGAATGACTTTGAACTGGCACGGGGTGATTTCCAGAAGGTC < 41bp 0.461685216861947 0.741396435942388 0.83810633 0.91755867 prediction 0.482792871884776 Functional Gain - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2910367 chr12:2910371 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_110822 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:2910340-2910373
64251 chr3 195956827 195956827 1 + T C rs17852687 195956825 + 195956805 195956845 41 CTCTATGGATCAACACTTTCCTTGGCGTGTCCACACTGCTG CTCTATGGATCAACACTTTCCTCGGCGTGTCCACACTGCTG < 41bp 0.569125489797774 0.810500118489196 0.22411388 0.32853785 prediction 0.482749257382844 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195956825 chr3:195956827 synonymous SNV . 0 23 hm5C_associated_SNPs_110830 0 0 1 GRWD1 POSTAR2 ENCODE chr3:195956785-195956830
64251 chr7 99699579 99699579 1 + C A HNSC 99699578 + 99699558 99699598 41 GGGACTGCCAGGAGACGAGTCCCCGGTTGTCATGGTAACCA GGGACTGCCAGGAGACGAGTCACCGGTTGTCATGGTAACCA < 41bp 0.525980249940103 0.767328820591057 0.13228387 0.080577284 prediction 0.482697141301909 Functional Gain - AP4M1 ENSG00000221838 CDS Human protein_coding chr7:99699578 chr7:99699579 synonymous SNV . 0 22 hm5C_associated_SNPs_110838 0 0 1 PRPF8 POSTAR2 ENCODE chr7:99699558-99699660
64251 chr3 119222829 119222829 1 + C T UCEC 119222828 + 119222808 119222848 41 AACACTAGTCTGAATGTATACCGAAATAAAGATGCCTTAAG AACACTAGTCTGAATGTATACTGAAATAAAGATGCCTTAAG < 41bp 0.522165396423881 0.763495011208125 0.08807194 0.14323369 prediction 0.482659229568488 Functional Gain - TIMMDC1 ENSG00000113845 CDS Human protein_coding chr3:119222828 chr3:119222829 stopgain 0.986 1 22 hm5C_associated_SNPs_110846 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:119222801-119222832
64251 chr12 11328198 11328198 1 + T G rs73053408 11328195 + 11328175 11328215 41 AAATGAACCAAGAAAAGAACCTCTGCAAGAACTATGAGAAT AAATGAACCAAGAAAAGAACCTCGGCAAGAACTATGAGAAT < 41bp 0.448465267322716 0.741302634326936 0.3923509 0.24304703 prediction 0.482605268653871 Functional Gain - SMIM10L1 ENSG00000256537;ENSG00000256629 intergenic Human other chr12:11328195 chr12:11328198 . . 0 24 hm5C_associated_SNPs_110853 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:11328194-11328204
64251 chr19 1042809 1042809 1 + A G rs3764645 1042806 + 1042786 1042826 41 GCACAGCTTGTTGGAGGCCGCTGAGGACCTGGCCCAGGAGG GCACAGCTTGTTGGAGGCCGCTGGGGACCTGGCCCAGGAGG < 41bp 0.498263841323216 0.741299096592045 0.85344183 0.9095678 prediction 0.48259819318409 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1042806 chr19:1042809 nonsynonymous SNV 0.118 1 24 hm5C_associated_SNPs_110857 0 0 9 BUD13 POSTAR2 ENCODE chr19:1042790-1042826
64251 chr2 211454912 211454912 1 + C A LUAD 211454911 + 211454891 211454931 41 GGATTTTGATCGCGGGAGGACCGGGGAACCCAGCTCTTGCA GGATTTTGATCGCGGGAGGACAGGGGAACCCAGCTCTTGCA < 41bp 0.483740020591604 0.741292464548821 0.91869557 0.91326123 prediction 0.482584929097642 Functional Gain - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211454911 chr2:211454912 nonsynonymous SNV 0.367 5 22 hm5C_associated_SNPs_110860 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:211454880-211454920
64251 chr1 40874380 40874380 1 + C A STAD 40874379 + 40874359 40874399 41 GACTTTATGAAGCCTATCTTCCTGAGACCTTTCGGCGACCT GACTTTATGAAGCCTATCTTCATGAGACCTTTCGGCGACCT < 41bp 0.533214017303507 0.774505673061828 0.17669678 0.5907136 prediction 0.482583311516641 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40874379 chr1:40874380 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_110861 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:40874355-40874389
64251 chr19 49842105 49842105 1 + C T rs200739819 49842104 + 49842084 49842124 41 TCCTAGATAAGGTGATCTTGCCCCAGCTCAGCAGGCTTGGA TCCTAGATAAGGTGATCTTGCTCCAGCTCAGCAGGCTTGGA < 41bp 0.556819995476555 0.798101841196381 0.06465298 0.30787802 prediction 0.482563691439652 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49842104 chr19:49842105 nonsynonymous SNV 0.032 1 22 hm5C_associated_SNPs_110865 0 0 3 DDX24 POSTAR2 ENCODE chr19:49842092-49842157
64251 chr3 101573919 101573919 1 + T A LUAD 101573915 + 101573895 101573935 41 GATATCCACAGAGTGCCTTTCAGGTGGCAGTGGCTGCCAAT GATATCCACAGAGTGCCTTTCAGGAGGCAGTGGCTGCCAAT < 41bp 0.623653889457276 0.86493056072045 0.90891117 0.933157 prediction 0.482553342526348 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101573915 chr3:101573919 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_110867 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:101573909-101573938
64251 chr16 89227303 89227303 1 + C G rs547561645 89227302 + 89227282 89227322 41 GGGCTCTCCCGGAAACTGGCCCCGGGTGCCTCGGTCCCTGC GGGCTCTCCCGGAAACTGGCCGCGGGTGCCTCGGTCCCTGC < 41bp 0.605601851863706 0.846865285067388 0.71938634 0.88910043 prediction 0.482526866407365 Functional Gain - LINC00304 ENSG00000180422 ncRNA_exonic Human lincRNA chr16:89227302 chr16:89227303 . . 0 22 hm5C_associated_SNPs_110870 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:89227303-89227325
64251 chr11 68315653 68315653 1 + C A COAD 68315649 + 68315629 68315669 41 TGACGTGTATCGAACCTCCACAGCCCAGGCAAGATGTGCTG TGACGTGTATCGAACCTCCACAGCACAGGCAAGATGTGCTG < 41bp 0.327744322206052 0.741258992552449 0.009547085 0.021681428 prediction 0.482517985104898 Functional Gain - PPP6R3 ENSG00000110075 CDS Human protein_coding chr11:68315649 chr11:68315653 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_110872 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:68315611-68315714
64251 chr16 89656320 89656320 1 + C T STAD 89656319 + 89656299 89656339 41 TTCCAGTGACAAGAGGTTTTCCGCTTTGGGGTTTGGAGCCC TTCCAGTGACAAGAGGTTTTCTGCTTTGGGGTTTGGAGCCC < 41bp 0.491378102977694 0.741245094567223 0.113084644 0.15443006 prediction 0.482490189134446 Functional Gain - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89656319 chr16:89656320 synonymous SNV . 0 22 hm5C_associated_SNPs_110877 0 0 2 SRSF1 POSTAR2 ENCODE chr16:89656316-89656357
64251 chr1 110091339 110091339 1 + C A rs3814308 110091335 + 110091315 110091355 41 GGCCCGTGTCCCCTCTCCCGCCGCCGCCATGGGCTGCACGT GGCCCGTGTCCCCTCTCCCGCCGCAGCCATGGGCTGCACGT < 41bp 0.510620226951487 0.751864306585876 0.2990229 0.3715853 prediction 0.482488159268779 Functional Gain - GNAI3 ENSG00000065135 UTR5 Human protein_coding chr1:110091335 chr1:110091339 . . 0 25 hm5C_associated_SNPs_110878 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:110091300-110091340
64251 chr16 72046117 72046117 1 + C A COAD 72046116 + 72046096 72046136 41 CTGGCTGTTCGCTTCACCTCCCTGGGGCTCCTTCCACGGGC CTGGCTGTTCGCTTCACCTCCATGGGGCTCCTTCCACGGGC < 41bp 0.475763419686932 0.741237820410224 0.3744311 0.76587516 prediction 0.482475640820447 Functional Gain - DHODH ENSG00000102967 CDS Human protein_coding chr16:72046116 chr16:72046117 nonsynonymous SNV 0.848 2 22 hm5C_associated_SNPs_110879 0 0 2 PPIG POSTAR2 ENCODE chr16:72046042-72046150
64251 chr16 87426041 87426041 1 + C A rs536459957 87426037 + 87426017 87426057 41 GCCCAGATCCCTGCACCATGCCGTCGGAGAAGACCTTCAAG GCCCAGATCCCTGCACCATGCCGTAGGAGAAGACCTTCAAG < 41bp 0.362493448497417 0.741227748770052 0.087016225 0.23996547 prediction 0.482455497540104 Functional Gain - MAP1LC3B ENSG00000140941 CDS Human protein_coding chr16:87426037 chr16:87426041 stopgain 0.998 0 25 hm5C_associated_SNPs_110882 0 0 11 ALKBH5 POSTAR2 GSE38201,GSM936506 chr16:87426033-87426063
64251 chr2 239258005 239258005 1 + C A rs548950530 239258004 + 239257984 239258024 41 GAGTGCAAGACCAGCCCCTCCCCGGGTCAAACGGCAAGACA GAGTGCAAGACCAGCCCCTCCACGGGTCAAACGGCAAGACA < 41bp 0.544174711065229 0.785396313891048 0.7098714 0.20468909 prediction 0.482443205651638 Functional Gain - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239258004 chr2:239258005 synonymous SNV . 0 22 hm5C_associated_SNPs_110884 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:239257992-239258016
64251 chr3 50103886 50103886 1 + C T LUSC 50103885 + 50103865 50103905 41 TGCTTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGATC TGCTTTGCAGAAGGCAGTTTCTCAATAAAGAAGTTCTGATC < 41bp 0.479391119596774 0.741195571074183 0.22381932 0.8710413 prediction 0.482391142148367 Functional Gain - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50103885 chr3:50103886 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_110890 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:50103880-50103918
64251 chr7 140378994 140378994 1 + C T SKCM 140378993 + 140378973 140379013 41 GCTCAGAATCTAGAACACTTCCAGGTCAACTTCCGGAATGT GCTCAGAATCTAGAACACTTCTAGGTCAACTTCCGGAATGT < 41bp 0.524545994368323 0.765733823455852 0.3924808 0.40330812 prediction 0.482375658175057 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140378993 chr7:140378994 stopgain 0.941 0 22 hm5C_associated_SNPs_110891 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:140378985-140379012
64251 chr16 23700836 23700836 1 + C T UCEC 23700835 + 23700815 23700855 41 ATCACCCTCCTTAAATATTTCCGCAATTACATGAGCGAGCA ATCACCCTCCTTAAATATTTCTGCAATTACATGAGCGAGCA < 41bp 0.474409405461252 0.741183263194652 0.095801055 0.21497267 prediction 0.482366526389304 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23700835 chr16:23700836 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_110893 0 0 18 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:23700814-23700836
64251 chr11 727566 727566 1 + C A rs544631665 727562 + 727542 727582 41 ACTCCCAGCGCCCACTCTTACAGGCCCAGGACTGGAGCTTT ACTCCCAGCGCCCACTCTTACAGGACCAGGACTGGAGCTTT < 41bp 0.640550746558828 0.881723380738855 0.9209795 0.9287889 prediction 0.482345268360054 Functional Gain - EPS8L2 ENSG00000177106 UTR3 Human protein_coding chr11:727562 chr11:727566 . . 0 25 hm5C_associated_SNPs_110896 0 0 3 DROSHA POSTAR2 ENCODE chr11:727479-727599
64251 chr1 7890117 7890117 1 + T C rs2640909 7890115 + 7890095 7890135 41 CCTACTGCCAGCACACTGTCCATGGGATTGCCTCCCAGCAG CCTACTGCCAGCACACTGTCCACGGGATTGCCTCCCAGCAG < 41bp 0.531973444699864 0.773135445075328 0.3926276 0.47616962 prediction 0.482324000750929 Functional Gain - PER3 ENSG00000049246 CDS Human protein_coding chr1:7890115 chr1:7890117 nonsynonymous SNV 0.031 0 23 hm5C_associated_SNPs_110900 0 0 1 YBX3 POSTAR2 ENCODE chr1:7890081-7890154
64251 chr3 25833291 25833291 1 + C T STAD 25833290 + 25833270 25833310 41 TCTGAGCACAAACTCAGATCCCAAGTTGGCATGTCGACCAT TCTGAGCACAAACTCAGATCCTAAGTTGGCATGTCGACCAT < 41bp 0.521258971628089 0.76239266665023 0.037321687 0.030158311 prediction 0.482267390044281 Functional Gain - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833290 chr3:25833291 synonymous SNV . 0 22 hm5C_associated_SNPs_110909 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:25833279-25833305
64251 chr1 113232098 113232098 1 + C T UCEC 113232097 + 113232077 113232117 41 GTCCAGGGGCCCCATGAAGCCCGAGATGGGCAGCTCCTTAT GTCCAGGGGCCCCATGAAGCCTGAGATGGGCAGCTCCTTAT < 41bp 0.505811859362112 0.746944133684563 0.25849944 0.1590493 prediction 0.482264548644901 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113232097 chr1:113232098 stopgain 1.000 0 22 hm5C_associated_SNPs_110910 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:113232090-113232130
64251 chr2 231742827 231742827 1 + C A rs192245304 231742826 + 231742806 231742846 41 GTGGTGTGAGGCCCTCCTCCCCCAGAACCCCCTGCCGTGTT GTGGTGTGAGGCCCTCCTCCCACAGAACCCCCTGCCGTGTT < 41bp 0.485948929116241 0.741129998056273 0.12998673 0.11883387 prediction 0.482259996112547 Functional Gain - ITM2C ENSG00000135916 UTR3 Human protein_coding chr2:231742826 chr2:231742827 . . 0 22 hm5C_associated_SNPs_110911 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:231742811-231742873
64251 chr1 160326468 160326468 1 + A G STAD 160326465 + 160326445 160326485 41 TGTTGTACAGTATGCCTTGGCAAATTTGACTGGCACAGTGG TGTTGTACAGTATGCCTTGGCAAGTTTGACTGGCACAGTGG < 41bp 0.511862860937681 0.752981935366845 0.27089673 0.36010087 prediction 0.482238148858328 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160326465 chr1:160326468 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_110915 0 0 1 PUM2 POSTAR2 ENCODE chr1:160326436-160326490
64251 chr19 5654419 5654419 1 + C T UCEC 5654418 + 5654398 5654438 41 GACTGTAGTAATGGATAAATCCAAAGGGGTGCCTGTGATTA GACTGTAGTAATGGATAAATCTAAAGGGGTGCCTGTGATTA < 41bp 0.549791465403888 0.790894302614318 0.22355014 0.052309513 prediction 0.48220567442086 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5654418 chr19:5654419 synonymous SNV . 0 22 hm5C_associated_SNPs_110917 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:5654360-5654419
64251 chr5 137765649 137765649 1 + C T CESC 137765648 + 137765628 137765668 41 GAGAAGATCCGGGAGCTGCTCCGAAAGGTACGCCCCTGGGT GAGAAGATCCGGGAGCTGCTCTGAAAGGTACGCCCCTGGGT < 41bp 0.492081127073755 0.741087782818685 0.20263311 0.12174708 prediction 0.482175565637371 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137765648 chr5:137765649 stopgain 0.901 1 22 hm5C_associated_SNPs_110922 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137765633-137765650
64251 chr7 27193923 27193923 1 + T C rs189579948 27193921 + 27193901 27193941 41 ATTTAAATAGATGCCAATACCCTGATCCTGGACCTCAGCAC ATTTAAATAGATGCCAATACCCCGATCCTGGACCTCAGCAC < 41bp 0.489729772690347 0.741075756373377 0.22436848 0.30252212 prediction 0.482151512746754 Functional Gain - HOXA-AS3 ENSG00000254369 ncRNA_exonic Human antisense chr7:27193921 chr7:27193923 . . 0 23 hm5C_associated_SNPs_110924 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:27193915-27193938
64251 chr11 57466174 57466174 1 + C T LIHC 57466173 + 57466153 57466193 41 TTTTCACTTCGATCCACTATCCAGTGGCTCACGCTCCTCCA TTTTCACTTCGATCCACTATCTAGTGGCTCACGCTCCTCCA < 41bp 0.52812344589169 0.769180255085749 0.86221087 0.23260224 prediction 0.482113618388118 Functional Gain - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57466173 chr11:57466174 synonymous SNV . 0 22 hm5C_associated_SNPs_110928 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:57466152-57466184
64251 chr3 122283241 122283241 1 + C G rs34377629 122283237 + 122283217 122283257 41 CGCCTTTACCGCCCAGCTGCCTCCCGGAGCCCCCGCGCCCT CGCCTTTACCGCCCAGCTGCCTCCGGGAGCCCCCGCGCCCT < 41bp 0.512255084684069 0.753303353266348 0.19023752 0.47650704 prediction 0.482096537164558 Functional Gain - DTX3L ENSG00000163840 UTR5 Human protein_coding chr3:122283237 chr3:122283241 . . 0 25 hm5C_associated_SNPs_110931 0 0 1 DDX3X POSTAR2 ENCODE chr3:122283221-122283444
64251 chr5 96078410 96078410 1 + C A THCA 96078406 + 96078386 96078426 41 GCTCTGTCGGCTTCACTGGGCACCCGGCAAGCAGAACCTGA GCTCTGTCGGCTTCACTGGGCACCAGGCAAGCAGAACCTGA < 41bp 0.376919412255552 0.741046289450542 0.079364896 0.16816801 prediction 0.482092578901084 Functional Gain - CAST ENSG00000153113 CDS Human protein_coding chr5:96078406 chr5:96078410 synonymous SNV . 0 25 hm5C_associated_SNPs_110933 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:96078371-96078411
64251 chr12 57920935 57920935 1 + C A rs76917839 57920931 + 57920911 57920951 41 CCTACTTTTCCCCCCACTTTCAGCCCCCCCTACCCTCATAG CCTACTTTTCCCCCCACTTTCAGCACCCCCTACCCTCATAG < 41bp 0.31856221659314 0.741043506623332 0.32734096 0.28619868 prediction 0.482087013246664 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920931 chr12:57920935 synonymous SNV . 0 25 hm5C_associated_SNPs_110935 0 0 6 DDX59 POSTAR2 ENCODE chr12:57920833-57920955
64251 chr1 16091602 16091602 1 + C T SKCM 16091601 + 16091581 16091621 41 TGTGAGGCCCGGCGTGGCCGCCCCTGGGAGGCTCCTGCCCC TGTGAGGCCCGGCGTGGCCGCTCCTGGGAGGCTCCTGCCCC < 41bp 0.501261073773772 0.742303272603347 0.3603018 0.22920501 prediction 0.482084397659149 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091601 chr1:16091602 nonsynonymous SNV 0.023 3 22 hm5C_associated_SNPs_110936 0 0 1 PPIG POSTAR2 ENCODE chr1:16091522-16091689
64251 chr10 1043184 1043184 1 + C T GBM 1043183 + 1043163 1043203 41 CCCGTTTGCCAACCATTGATCCGAATACCAGGACCCTGCTT CCCGTTTGCCAACCATTGATCTGAATACCAGGACCCTGCTT < 41bp 0.493435825808038 0.741036493311204 0.59719604 0.06076768 prediction 0.482072986622409 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1043183 chr10:1043184 nonsynonymous SNV 0.800 4 22 hm5C_associated_SNPs_110937 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:1043125-1043210
64251 chrX 48371045 48371045 1 + T G CESC 48371042 + 48371022 48371062 41 CTGCTGTGCCTTGTGCTGTCCACTTGCGTGGGCCCCTACCT CTGCTGTGCCTTGTGCTGTCCACGTGCGTGGGCCCCTACCT < 41bp 0.343437190298894 0.741035847493611 0.061764777 0.31155992 prediction 0.482071694987222 Functional Gain - PORCN ENSG00000102312 CDS Human protein_coding chrX:48371042 chrX:48371045 synonymous SNV . 0 24 hm5C_associated_SNPs_110938 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48370995-48371047
64251 chr6 43970658 43970658 1 + T A rs115402675 43970654 + 43970634 43970674 41 GCCTCCCCCGGCGGGAGTCCCTTCTTCGCGGCCTCTGCCGC GCCTCCCCCGGCGGGAGTCCCTTCATCGCGGCCTCTGCCGC < 41bp 0.409945329800568 0.741027563849247 0.06698018 0.7191565 prediction 0.482055127698494 Functional Gain - C6orf223 ENSG00000181577 CDS Human protein_coding chr6:43970654 chr6:43970658 nonsynonymous SNV 0.090 2 25 hm5C_associated_SNPs_110943 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:43970650-43970691
64251 chr17 1657807 1657807 1 + C A LAML 1657806 + 1657786 1657826 41 CCCCATGGAGGAGGATTACCCCCAGTTTGGCAGCCCCAAGT CCCCATGGAGGAGGATTACCCACAGTTTGGCAGCCCCAAGT < 41bp 0.55469020161961 0.795709385916812 0.06287971 0.075849384 prediction 0.482038368594403 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657806 chr17:1657807 synonymous SNV . 0 22 hm5C_associated_SNPs_110946 0 0 4 DDX55 POSTAR2 ENCODE chr17:1657807-1657823
64251 chr14 55529911 55529911 1 + C G rs114757196 55529910 + 55529890 55529930 41 GGGCACCGTTCCACCAGGAGCCTGGGGACCACCAGCACCAT GGGCACCGTTCCACCAGGAGCGTGGGGACCACCAGCACCAT < 41bp 0.429213542642451 0.741017078915673 0.36257255 0.5518958 prediction 0.482034157831347 Functional Gain - MAPK1IP1L ENSG00000168175 CDS Human protein_coding chr14:55529910 chr14:55529911 synonymous SNV . 0 22 hm5C_associated_SNPs_110947 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:55529897-55529928
64251 chr7 1131412 1131412 1 + A G rs115028942 1131409 + 1131389 1131429 41 GGCGTGGGCCTGGAGATGTACCCAGGCACCGCGCAGCCTGC GGCGTGGGCCTGGAGATGTACCCGGGCACCGCGCAGCCTGC < 41bp 0.526126244052245 0.767136166461041 0.055341363 0.3174445 prediction 0.482019844817593 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131409 chr7:1131412 synonymous SNV . 0 24 hm5C_associated_SNPs_110948 0 0 1 RBM15 POSTAR2 ENCODE chr7:1131349-1131425
64251 chr1 25824875 25824875 1 + C T LUSC 25824874 + 25824854 25824894 41 GCCCCCTGAGCCCTGTTTCCCCCCACTACTCTTCCAAATTT GCCCCCTGAGCCCTGTTTCCCTCCACTACTCTTCCAAATTT < 41bp 0.557894680221167 0.798899505420187 0.040860206 0.9286177 prediction 0.482009650398039 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25824874 chr1:25824875 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_110953 0 0 4 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:25824868-25824895
64251 chr3 47361170 47361170 1 + C T PRAD 47361169 + 47361149 47361189 41 GACCACAAATTCAGTGCCCACCGGATTGTCTTAGCAGCCTC GACCACAAATTCAGTGCCCACTGGATTGTCTTAGCAGCCTC < 41bp 0.489059988046159 0.740995816993865 0.14415061 0.17316619 prediction 0.481991633987731 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47361169 chr3:47361170 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_110958 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:47361154-47361188
64251 chr1 27321038 27321038 1 + C G rs375877493 27321034 + 27321014 27321054 41 CGACCGACTGATCGCGGACGCCGGCTGGAAGGACTACGGAT CGACCGACTGATCGCGGACGCCGGGTGGAAGGACTACGGAT < 41bp 0.588587099474744 0.829579315893568 0.64069206 0.90440845 prediction 0.481984432837648 Functional Gain - TRNP1 ENSG00000253368 UTR3 Human protein_coding chr1:27321034 chr1:27321038 . . 0 25 hm5C_associated_SNPs_110960 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:27321033-27321051
64251 chr14 102910131 102910131 1 + C T SKCM 102910130 + 102910110 102910150 41 AGGGCGTGAGCAGCTTCTGTCCGGAAGGCGAGCAGTGGAAG AGGGCGTGAGCAGCTTCTGTCTGGAAGGCGAGCAGTGGAAG < 41bp 0.55283890201183 0.793788016337145 0.88894963 0.8124757 prediction 0.481898228650631 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102910130 chr14:102910131 nonsynonymous SNV 0.915 3 22 hm5C_associated_SNPs_110967 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr14:102910102-102910137
64251 chr15 75185092 75185092 1 + C T LAML 75185091 + 75185071 75185111 41 GCCATTGCCCTCACCCCCTTCCAGGGCTTGTGTGGCTTCCG GCCATTGCCCTCACCCCCTTCTAGGGCTTGTGTGGCTTCCG < 41bp 0.527968567521546 0.768906019374786 0.76695955 0.24035323 prediction 0.481874903706478 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75185091 chr15:75185092 stopgain 0.999 1 22 hm5C_associated_SNPs_110968 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr15:75185065-75185126
64251 chr6 72011443 72011443 1 + C A LIHC 72011442 + 72011422 72011462 41 GCACAAAAAAGCCAAGGACTCCAAAAATTCCTCCTCAGCTG GCACAAAAAAGCCAAGGACTCAAAAAATTCCTCCTCAGCTG < 41bp 0.536616030990895 0.777551545070901 0.016124666 0.14888337 prediction 0.481871028160012 Functional Gain - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72011442 chr6:72011443 synonymous SNV . 0 22 hm5C_associated_SNPs_110970 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:72011431-72011469
64251 chr17 1945347 1945347 1 + C A rs201424118 1945346 + 1945326 1945366 41 CTCCTTGCCGGGCATAATGGCCGCGCAGCGACCCCTGCGGG CTCCTTGCCGGGCATAATGGCAGCGCAGCGACCCCTGCGGG < 41bp 0.545390666779972 0.786322289121717 0.75397635 0.927865 prediction 0.481863244683491 Functional Gain - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1945346 chr17:1945347 synonymous SNV . 0 22 hm5C_associated_SNPs_110971 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:1945343-1945374
64251 chr6 44116100 44116100 1 + C T SKCM 44116099 + 44116079 44116119 41 GGCATGGCCTTTGTCACCTTCCACAATGAGACTATCACCGC GGCATGGCCTTTGTCACCTTCTACAATGAGACTATCACCGC < 41bp 0.465817025452912 0.740928074585737 0.16795787 0.9292184 prediction 0.481856149171475 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116099 chr6:44116100 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_110972 0 0 3 UCHL5 POSTAR2 ENCODE chr6:44116094-44116122
64251 chr19 5915281 5915281 1 + T C rs200316125 5915279 + 5915259 5915299 41 TACAGCGGCGTGAGTGCCTCCATGAACACGGATGAGGAGTT TACAGCGGCGTGAGTGCCTCCACGAACACGGATGAGGAGTT < 41bp 0.56748701329893 0.808413337754337 0.11439669 0.23223889 prediction 0.481852648910815 Functional Gain - CAPS ENSG00000105519 CDS Human protein_coding chr19:5915279 chr19:5915281 nonsynonymous SNV 0.364 1 23 hm5C_associated_SNPs_110973 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:5915245-5915282
64251 chr17 41585879 41585879 1 + C A BLCA 41585875 + 41585855 41585895 41 AATCTTTGACCCAGCTCCACCAGGCAGCAGAAAGGTAACAT AATCTTTGACCCAGCTCCACCAGGAAGCAGAAAGGTAACAT < 41bp 0.325182126898763 0.740924580382279 0.43167454 0.58373064 prediction 0.481849160764558 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585875 chr17:41585879 synonymous SNV . 0 25 hm5C_associated_SNPs_110975 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41585854-41585879
64251 chr17 26727647 26727647 1 - A T COAD 26727651 - 26727631 26727671 41 TCCTCCTGGGAGCTGGCCTCCTGCTCATCCCGGCTGTTCTG TCCTCCTGGGAGCTGGCCTCCTGCACATCCCGGCTGTTCTG < 41bp 0.393334747132213 0.740913050672171 0.084456 0.30467302 prediction 0.481826101344341 Functional Gain - SLC46A1 ENSG00000076351 CDS Human protein_coding chr17:26727651 chr17:26727647 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_110977 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:26727640-26727660
64251 chr16 68330394 68330394 1 + C A UCEC 68330393 + 68330373 68330413 41 TCTACCTCCGCTGGAAGGAGCCCAAGCGGCCCCGGCCTCTC TCTACCTCCGCTGGAAGGAGCACAAGCGGCCCCGGCCTCTC < 41bp 0.549244646013368 0.790140821909093 0.29938316 0.47056782 prediction 0.48179235179145 Functional Gain - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330393 chr16:68330394 nonsynonymous SNV 0.561 5 22 hm5C_associated_SNPs_110981 0 0 2 PRPF8 POSTAR2 ENCODE chr16:68330380-68330457
64251 chr11 126276065 126276065 1 + C T UCEC 126276064 + 126276044 126276084 41 GAGAAACATGGTCAGCAAGTCCCGTGAGTGTCATCCGAGGG GAGAAACATGGTCAGCAAGTCTCGTGAGTGTCATCCGAGGG < 41bp 0.497433346288189 0.740895224897132 0.4032234 0.37291315 prediction 0.481790449794265 Functional Gain - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126276064 chr11:126276065 synonymous SNV . 0 22 hm5C_associated_SNPs_110983 0 0 2 PRPF8 POSTAR2 ENCODE chr11:126276064-126276111
64251 chr2 139307804 139307804 1 + C T UCEC 139307803 + 139307783 139307823 41 GGTGATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATA GGTGATGTCTCGGGAACCCACTCCACCTCTACCTGGAGATA < 41bp 0.567105305512074 0.807993694730529 0.11951402 0.9244723 prediction 0.481776778436911 Functional Gain - SPOPL ENSG00000144228 CDS Human protein_coding chr2:139307803 chr2:139307804 synonymous SNV . 0 22 hm5C_associated_SNPs_110984 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:139307796-139307825
64251 chr14 52465255 52465255 1 + T A rs35006177 52465251 + 52465231 52465271 41 AGTACCTGATAATTCAAAAACTGCTGACAATGCAACTAAAA AGTACCTGATAATTCAAAAACTGCAGACAATGCAACTAAAA < 41bp 0.391780230103825 0.740884125802893 0.3565365 0.3107717 prediction 0.481768251605786 Functional Gain - C14orf166 ENSG00000087302 CDS Human protein_coding chr14:52465251 chr14:52465255 synonymous SNV . 0 25 hm5C_associated_SNPs_110985 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:52465212-52465278
64251 chr17 61904786 61904786 1 + C G rs116192337 61904782 + 61904762 61904802 41 TCTGCCTGGTCTTCAGGTCCCAATCCTCCGCTTCCGCGCTT TCTGCCTGGTCTTCAGGTCCCAATGCTCCGCTTCCGCGCTT < 41bp 0.451387560977884 0.740868007618279 0.0458543 0.02520001 prediction 0.481736015236557 Functional Gain - FTSJ3;PSMC5 ENSG00000087191;ENSG00000108592 UTR5 Human other chr17:61904782 chr17:61904786 . . 0 25 hm5C_associated_SNPs_110988 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:61904778-61904810
64251 chr2 66795850 66795850 1 + T C COAD 66795848 + 66795828 66795868 41 GGACAGCCCATGGGAGGTTTCGTAATGGACGGTCAGCAACA GGACAGCCCATGGGAGGTTTCGCAATGGACGGTCAGCAACA < 41bp 0.462620726911896 0.740864992621973 0.29518294 0.39342153 prediction 0.481729985243947 Functional Gain - MEIS1 ENSG00000143995 CDS Human protein_coding chr2:66795848 chr2:66795850 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_110990 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:66795849-66795872
64251 chr7 129349023 129349023 1 + C T SKCM 129349022 + 129349002 129349042 41 ATCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAG ATCTGGTGGCCTGAAGATATCTCCTGGGCAAATGTCCGGAG < 41bp 0.576224979097051 0.817057454308017 0.04191479 0.13219428 prediction 0.481664950421931 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129349022 chr7:129349023 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_110999 0 0 2 DDX24 POSTAR2 ENCODE chr7:129348983-129349063
64251 chr15 40268953 40268953 1 + C A rs188526490 40268952 + 40268932 40268972 41 CACTTCGGGCGAGCGCTCGGCCAGTGCCCGTTTCCCCGCCA CACTTCGGGCGAGCGCTCGGCAAGTGCCCGTTTCCCCGCCA < 41bp 0.502575990863808 0.74340093418816 0.09249669 0.5581997 prediction 0.481649886648704 Functional Gain - EIF2AK4 ENSG00000128829 CDS Human protein_coding chr15:40268952 chr15:40268953 synonymous SNV . 0 22 hm5C_associated_SNPs_111001 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:40268952-40268953
64251 chr16 4744991 4744991 1 + C A UCEC 4744990 + 4744970 4745010 41 CGTGCGGGTCCCGCTGTACACCCAGAAGGACCGAGTCGGAG CGTGCGGGTCCCGCTGTACACACAGAAGGACCGAGTCGGAG < 41bp 0.546163275791223 0.786987971997077 0.023104012 0.06329188 prediction 0.481649392411707 Functional Gain - NUDT16L1 ENSG00000168101 CDS Human protein_coding chr16:4744990 chr16:4744991 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_111002 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:4744985-4745026
64251 chr12 101017767 101017767 1 + C T UCEC 101017766 + 101017746 101017786 41 CAAAAGGCATAACGAAGAAACCGCAGGCTCCTTCAAACAAT CAAAAGGCATAACGAAGAAACTGCAGGCTCCTTCAAACAAT < 41bp 0.50237663857892 0.74319950167006 0.010272235 0.042715788 prediction 0.481645726182281 Functional Gain - GAS2L3 ENSG00000139354 CDS Human protein_coding chr12:101017766 chr12:101017767 nonsynonymous SNV 0.016 0 22 hm5C_associated_SNPs_111003 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:101017762-101017794
64251 chr13 43597757 43597757 1 + C A rs116395845 43597753 + 43597733 43597773 41 CGGCGCCTTGAGTCTCCGGGCCGCCTTGCCATGGCTGCCCG CGGCGCCTTGAGTCTCCGGGCCGCATTGCCATGGCTGCCCG < 41bp 0.535809095447481 0.776630708868817 0.07890257 0.12626666 prediction 0.481643226842672 Functional Gain - DNAJC15 ENSG00000120675 UTR5 Human protein_coding chr13:43597753 chr13:43597757 . . 0 25 hm5C_associated_SNPs_111004 0 0 5 DDX3X POSTAR2 ENCODE chr13:43597731-43597838
64251 chr20 39721132 39721132 1 + C T SKCM 39721131 + 39721111 39721151 41 GGTGGGAAGAAGAGCGCTATCCTGAAGGCATCAAGTGGAAA GGTGGGAAGAAGAGCGCTATCTTGAAGGCATCAAGTGGAAA < 41bp 0.534675640371312 0.775493751893876 0.18356302 0.19010818 prediction 0.481636223045129 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39721131 chr20:39721132 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111005 0 0 30 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:39721124-39721148
64251 chr12 6943129 6943129 1 + C T SKCM 6943128 + 6943108 6943148 41 TGTGACCTTGACCCAGGATTCCAGGCAGCTGAATGGGTCGG TGTGACCTTGACCCAGGATTCTAGGCAGCTGAATGGGTCGG < 41bp 0.497089197803281 0.740811173910962 0.8468478 0.73868734 prediction 0.481622347821924 Functional Gain - P3H3 ENSG00000110811 CDS Human protein_coding chr12:6943128 chr12:6943129 synonymous SNV . 0 22 hm5C_associated_SNPs_111011 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr12:6943111-6943137
64251 chrX 129148820 129148820 1 + C T SKCM 129148819 + 129148799 129148839 41 CCTCGCCCTTTGTCATCTTTCCCGAGATCGTGAGGAATGGG CCTCGCCCTTTGTCATCTTTCTCGAGATCGTGAGGAATGGG < 41bp 0.541735785356347 0.782542412361725 0.122401655 0.0312289 prediction 0.481613254010757 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129148819 chrX:129148820 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_111013 0 0 4 MBNL2 POSTAR2 GSE68890,GSM1685425 chrX:129148800-129148820
64251 chr9 135919222 135919222 1 + C T SARC 135919221 + 135919201 135919241 41 CCCGAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCTCTA CCCGAGAAGGAGGCCTTTTTCTACCAGGAGCTGCCGCTCTA < 41bp 0.480046974348366 0.740782246284821 0.1984326 0.0641467 prediction 0.481564492569643 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919221 chr9:135919222 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_111021 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:135919213-135919245
64251 chr8 79630271 79630271 1 + C G rs140611881 79630270 + 79630250 79630290 41 CAACAAATTATTTCATAAATCCGAAAAACTAAGAGAAAAAA CAACAAATTATTTCATAAATCGGAAAAACTAAGAGAAAAAA < 41bp 0.468528921445207 0.740779520703384 0.49298477 0.5569738 prediction 0.481559041406769 Functional Gain - ZC2HC1A ENSG00000104427 UTR3 Human protein_coding chr8:79630270 chr8:79630271 . . 0 22 hm5C_associated_SNPs_111022 0 0 1 HNRNPD POSTAR2 GSE52971,GSM1279666 chr8:79630249-79630272
64251 chr2 190328454 190328454 1 + C T STAD 190328453 + 190328433 190328473 41 TCACCGAAACCTTGAAGCATCCGCAGTAATTCAAGGCCTAG TCACCGAAACCTTGAAGCATCTGCAGTAATTCAAGGCCTAG < 41bp 0.517459254835131 0.758229512196274 0.017233342 0.114200264 prediction 0.481540514722286 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190328453 chr2:190328454 synonymous SNV . 0 22 hm5C_associated_SNPs_111024 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr2:190328430-190328477
64251 chr2 33534585 33534585 1 + C T UCEC 33534584 + 33534564 33534604 41 GGTCCTATGATTGTACTTGTCCGGATGGATTTCAGCTAGAT GGTCCTATGATTGTACTTGTCTGGATGGATTTCAGCTAGAT < 41bp 0.490491915823278 0.740760363023571 0.4013701 0.41800267 prediction 0.481520726047142 Functional Gain - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33534584 chr2:33534585 nonsynonymous SNV 0.465 1 22 hm5C_associated_SNPs_111025 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr2:33534554-33534592
64251 chr1 54432012 54432012 1 + C A THYM 54432011 + 54431991 54432031 41 TGACTGCGGAAGCTGTGAAGCCACGGGAGACCTCGGAGCCT TGACTGCGGAAGCTGTGAAGCAACGGGAGACCTCGGAGCCT < 41bp 0.536819982075105 0.777579792396807 0.79797775 0.7216686 prediction 0.481519620643402 Functional Gain - LRRC42 ENSG00000116212 CDS Human protein_coding chr1:54432011 chr1:54432012 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_111026 0 0 4 DGCR8 POSTAR2 ENCODE chr1:54432010-54432036
64251 chr12 53775974 53775974 1 + C G rs35550715 53775973 + 53775953 53775993 41 CAATGAGAACAGCAACAACTCCCAGGGCCCGAGTCAGTCAG CAATGAGAACAGCAACAACTCGCAGGGCCCGAGTCAGTCAG < 41bp 0.418307841072885 0.74075734437876 0.7306125 0.81867546 prediction 0.48151468875752 Functional Gain - SP1 ENSG00000185591 CDS Human protein_coding chr12:53775973 chr12:53775974 synonymous SNV . 0 22 hm5C_associated_SNPs_111028 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:53775941-53775985
64251 chr3 9776308 9776308 1 + C A UCEC 9776304 + 9776284 9776324 41 AAGGAGAAGCGCAAGGACTCCAACCATCACCACCACCACAA AAGGAGAAGCGCAAGGACTCCAACAATCACCACCACCACAA < 41bp 0.315214225302073 0.74075308422981 0.027184755 0.019599974 prediction 0.48150616845962 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9776304 chr3:9776308 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_111029 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:9776286-9776326
64251 chr2 182322980 182322980 1 + C T ESCA 182322979 + 182322959 182322999 41 CAACGCTTCAGTGATCAATCCCGGGGCGATTTACAGATGCA CAACGCTTCAGTGATCAATCCTGGGGCGATTTACAGATGCA < 41bp 0.510312536704872 0.751064333268979 0.91287684 0.9097551 prediction 0.481503593128215 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182322979 chr2:182322980 synonymous SNV . 0 22 hm5C_associated_SNPs_111030 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr2:182322974-182323001
64251 chr15 45003787 45003787 1 + C G BLCA 45003783 + 45003763 45003803 41 TTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGC TTAGCTGTGCTCGCGCTACTCTCTGTTTCTGGCCTGGAGGC < 41bp 0.465450966117983 0.740726617120825 0.6236164 0.28241718 prediction 0.481453234241649 Functional Gain - B2M ENSG00000166710 CDS Human protein_coding chr15:45003783 chr15:45003787 nonsynonymous SNV 0.001 1 25 hm5C_associated_SNPs_111032 0 0 40 DDX3X POSTAR2 GSE70804,GSM1819211 chr15:45003700-45003800
64251 chr2 172953482 172953482 1 + C G rs80173687 172953478 + 172953458 172953498 41 AGGTCTGAGCGGCCCGGGTCCTGCCGGGCTGACCATCTCCG AGGTCTGAGCGGCCCGGGTCCTGCGGGGCTGACCATCTCCG < 41bp 0.60476747798977 0.845481190052568 0.07745215 0.39240113 prediction 0.481427424125596 Functional Gain - DLX1 ENSG00000144355 UTR3 Human protein_coding chr2:172953478 chr2:172953482 . . 0 25 hm5C_associated_SNPs_111035 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:172953480-172953500
64251 chr11 13736177 13736177 1 + C T SKCM 13736176 + 13736156 13736196 41 GATTGCTGTAAGCCATAAGGCCCCAGCATTCCTGTATGATA GATTGCTGTAAGCCATAAGGCTCCAGCATTCCTGTATGATA < 41bp 0.561826082071899 0.802539222244637 0.014091164 0.10409629 prediction 0.481426280345475 Functional Gain - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13736176 chr11:13736177 synonymous SNV . 0 22 hm5C_associated_SNPs_111037 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr11:13736144-13736196
64251 chr7 37960746 37960746 1 + T A PRAD 37960742 + 37960722 37960762 41 CGCAACAGCCGCGCCCTGCTCTCCTACGACGGGCTCAACCA CGCAACAGCCGCGCCCTGCTCTCCAACGACGGGCTCAACCA < 41bp 0.656475273563064 0.897185201681037 0.23153976 0.9658289 prediction 0.481419856235945 Functional Gain - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960742 chr7:37960746 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_111039 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:37960746-37960747
64251 chr2 27558466 27558466 1 - T C ESCA 27558469 - 27558449 27558489 41 GCCCTGCTGGCTCAGCAACCCCCAGGTGAGTAGCACAGCAA GCCCTGCTGGCTCAGCAACCCCCGGGTGAGTAGCACAGCAA < 41bp 0.504127338654473 0.744826740984903 0.3024336 0.8356106 prediction 0.48139880466086 Functional Gain - GTF3C2 ENSG00000115207 CDS Human protein_coding chr2:27558469 chr2:27558466 synonymous SNV . 0 24 hm5C_associated_SNPs_111042 0 0 10 DDX24 POSTAR2 ENCODE chr2:27558464-27558523
64251 chr2 86426622 86426622 1 + C G CESC 86426618 + 86426598 86426638 41 GTAGGCGAAGGTGAAGATGGCTGCCTCTGCCTTTGCTGGTG GTAGGCGAAGGTGAAGATGGCTGCGTCTGCCTTTGCTGGTG < 41bp 0.589947488707403 0.830646778930522 0.07962999 0.13512933 prediction 0.481398580446237 Functional Gain - MRPL35 ENSG00000132313 CDS Human protein_coding chr2:86426618 chr2:86426622 synonymous SNV . 0 25 hm5C_associated_SNPs_111043 0 0 4 DDX3X POSTAR2 ENCODE chr2:86426594-86426657
64251 chr22 29695301 29695301 1 + C A OV 29695297 + 29695277 29695317 41 CCCCAAAGCCTGAAGGCTTCCTCCCGCCACCCTTTCCGCCC CCCCAAAGCCTGAAGGCTTCCTCCAGCCACCCTTTCCGCCC < 41bp 0.699960879897194 0.940651723728119 0.035583824 0.9396987 prediction 0.48138168766185 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695297 chr22:29695301 nonsynonymous SNV 0.993 3 25 hm5C_associated_SNPs_111044 0 0 3 GRWD1 POSTAR2 ENCODE chr22:29695282-29695322
64251 chr7 66093936 66093936 1 + C A rs551906037 66093932 + 66093912 66093952 41 CGCCTGCGCACTGCCTCTCGCCCCCCTCCGGCCAGCCCGCA CGCCTGCGCACTGCCTCTCGCCCCACTCCGGCCAGCCCGCA < 41bp 0.38548505609556 0.740685151822317 0.051798463 0.07034379 prediction 0.481370303644633 Functional Gain - KCTD7 ENSG00000243335 UTR5 Human protein_coding chr7:66093932 chr7:66093936 . . 0 25 hm5C_associated_SNPs_111047 0 0 1 DDX3X POSTAR2 ENCODE chr7:66093916-66094062
64251 chr7 100304826 100304826 1 + C T COAD 100304825 + 100304805 100304845 41 CGGGAGCCACTGACTCGGATCCGCAACAACTCAGCCATCCA CGGGAGCCACTGACTCGGATCTGCAACAACTCAGCCATCCA < 41bp 0.504079457600586 0.744762035636556 0.14944845 0.578408 prediction 0.48136515607194 Functional Gain - POP7 ENSG00000172336 CDS Human protein_coding chr7:100304825 chr7:100304826 nonsynonymous SNV 0.062 4 22 hm5C_associated_SNPs_111048 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100304766-100304826
64251 chr10 75553915 75553915 1 + C G GBM 75553911 + 75553891 75553931 41 TCCTGTGCCCTCAGGTGAAGCTGGCATACCAGGAGTCTGAG TCCTGTGCCCTCAGGTGAAGCTGGGATACCAGGAGTCTGAG < 41bp 0.432558471725727 0.740678566088625 0.7928721 0.8994245 prediction 0.481357132177249 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75553911 chr10:75553915 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_111050 0 0 7 BUD13 POSTAR2 ENCODE chr10:75553909-75553959
64251 chr13 100634825 100634825 1 + C A rs534770914 100634821 + 100634801 100634841 41 CCTGCCAGAGCAGCACGGGCCGCACGGCTCGCAGAATGTGC CCTGCCAGAGCAGCACGGGCCGCAAGGCTCGCAGAATGTGC < 41bp 0.343279741553249 0.740674320668658 0.03754443 0.12123072 prediction 0.481348641337316 Functional Gain - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100634821 chr13:100634825 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_111054 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:100634820-100634840
64251 chr15 42127411 42127411 1 + C T rs548174849 42127410 + 42127390 42127430 41 ATCCCATGTGCCCTGGGCCTCCGAAGCCCTGGGTGAGTGGA ATCCCATGTGCCCTGGGCCTCTGAAGCCCTGGGTGAGTGGA < 41bp 0.494100257476243 0.740674110528067 0.73817444 0.35992348 prediction 0.481348221056134 Functional Gain - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127410 chr15:42127411 synonymous SNV . 0 22 hm5C_associated_SNPs_111055 0 0 1 PPIG POSTAR2 ENCODE chr15:42127386-42127422
64251 chr17 79984867 79984867 1 + C A SKCM 79984866 + 79984846 79984886 41 AGCAAGGAGGTCCAGCACCTCCGGGAGGAGAAGTCCAAGCA AGCAAGGAGGTCCAGCACCTCAGGGAGGAGAAGTCCAAGCA < 41bp 0.562009203894146 0.802659301823541 0.9090221 0.9190533 prediction 0.48130019585879 Functional Gain - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79984866 chr17:79984867 synonymous SNV . 0 22 hm5C_associated_SNPs_111058 0 0 2 GRWD1 POSTAR2 ENCODE chr17:79984839-79984868
64251 chr10 12191690 12191690 1 + C T HNSC 12191689 + 12191669 12191709 41 TCATTGAAGTTGGAGATACACCGAAAGATAGAGCTTTATTC TCATTGAAGTTGGAGATACACTGAAAGATAGAGCTTTATTC < 41bp 0.50634834889585 0.746997110574344 0.03663847 0.09137064 prediction 0.481297523356988 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191689 chr10:12191690 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_111060 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:12191667-12191691
64251 chr1 210029033 210029033 1 + C G rs574774158 210029032 + 210029012 210029052 41 ACATTTCTAGGTGCTCCTCGCCGAGCTGTCATGGGCTTCAG ACATTTCTAGGTGCTCCTCGCGGAGCTGTCATGGGCTTCAG < 41bp 0.584651755851132 0.825291592277781 0.6083784 0.9020641 prediction 0.481279672853298 Functional Gain - DIEXF ENSG00000117597 UTR3 Human protein_coding chr1:210029032 chr1:210029033 . . 0 22 hm5C_associated_SNPs_111064 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:210029021-210029043
64251 chr20 377226 377226 1 + C T rs6115830 377225 + 377205 377245 41 ACAGGACCCGATGCCCTTAGCCCCAACCCGATCCCATCTCT ACAGGACCCGATGCCCTTAGCTCCAACCCGATCCCATCTCT < 41bp 0.483259131672556 0.740629858865069 0.15562743 0.8819728 prediction 0.481259717730137 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377225 chr20:377226 synonymous SNV . 0 22 hm5C_associated_SNPs_111065 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:377204-377233
64251 chr3 9516249 9516249 1 + T C UCEC 9516247 + 9516227 9516267 41 TCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGG TCTCCCACATGGGAGAGTAACACCACAGAGAAAGACTCAGG < 41bp 0.464065429317256 0.740609623047202 0.15569368 0.2304858 prediction 0.481219246094404 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9516247 chr3:9516249 nonsynonymous SNV 0.975 2 23 hm5C_associated_SNPs_111069 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:9516233-9516271
64251 chr22 50649126 50649126 1 + C T rs150909406 50649125 + 50649105 50649145 41 CTACGCGTACAGCAAGCAGCCCGAGGTGTGCAGGTGGAACC CTACGCGTACAGCAAGCAGCCTGAGGTGTGCAGGTGGAACC < 41bp 0.501602688783557 0.742208123659008 0.24290878 0.2807784 prediction 0.481210869750901 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649125 chr22:50649126 unknown . 0 22 hm5C_associated_SNPs_111072 0 0 2 NOL12 POSTAR2 ENCODE chr22:50649096-50649183
64251 chr19 58004733 58004733 1 + C A LUSC 58004732 + 58004712 58004752 41 AACTGTGGAAAATCCTTTAGCCGTAATGCTCACCTCATTGA AACTGTGGAAAATCCTTTAGCAGTAATGCTCACCTCATTGA < 41bp 0.52578775350212 0.766390702270031 0.07682189 0.08363786 prediction 0.481205897535822 Functional Gain - ZNF419 ENSG00000105136 CDS Human protein_coding chr19:58004732 chr19:58004733 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_111074 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:58004720-58004740
64251 chr11 119156009 119156009 1 + C T SKCM 119156008 + 119155988 119156028 41 ATATTCTGTTGGAGCAGAATCCCGACCTCAAAGACGCCCCT ATATTCTGTTGGAGCAGAATCTCGACCTCAAAGACGCCCCT < 41bp 0.53952181523021 0.780123125894846 0.16979495 0.1745756 prediction 0.481202621329272 Functional Gain - CBL ENSG00000110395 CDS Human protein_coding chr11:119156008 chr11:119156009 synonymous SNV . 0 22 hm5C_associated_SNPs_111076 0 0 3 FXR2 POSTAR2 ENCODE chr11:119155945-119156039
64251 chr11 66241241 66241241 1 + C T BLCA 66241240 + 66241220 66241260 41 AAATGGCGGACCCCAGATGGCCTGATGGATGGACTGACCAC AAATGGCGGACCCCAGATGGCTTGATGGATGGACTGACCAC < 41bp 0.526398698876273 0.766998291041657 0.41630244 0.30590653 prediction 0.481199184330768 Functional Gain - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66241240 chr11:66241241 synonymous SNV . 0 22 hm5C_associated_SNPs_111077 0 0 1 PPIG POSTAR2 ENCODE chr11:66241202-66241342
64251 chr17 1649113 1649113 1 + C A STAD 1649109 + 1649089 1649129 41 GCCATGATGGCCTTCACTGCCGACCTGTTCTCCCTGGTGGC GCCATGATGGCCTTCACTGCCGACATGTTCTCCCTGGTGGC < 41bp 0.323512509953654 0.740597375735457 0.10959402 0.1346367 prediction 0.481194751470914 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1649109 chr17:1649113 nonsynonymous SNV 0.546 3 25 hm5C_associated_SNPs_111079 0 0 1 PCBP2 POSTAR2 ENCODE chr17:1649101-1649128
64251 chr19 39217717 39217717 1 + C T UCEC 39217716 + 39217696 39217736 41 CAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTT CAGGAGCAGATGCAGGAGTTCTGGGCGTCCTTCAACCACTT < 41bp 0.508549689893752 0.749144529646724 0.9275979 0.9155383 prediction 0.481189679505943 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39217716 chr19:39217717 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_111080 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39217699-39217734
64251 chr13 52234780 52234780 1 + C A rs201069156 52234776 + 52234756 52234796 41 AGACAGTGGACAGTATTGGCCAAGCGTATACCATGCAATGC AGACAGTGGACAGTATTGGCCAAGAGTATACCATGCAATGC < 41bp 0.332444172324533 0.740582826105218 0.2037692 0.14413562 prediction 0.481165652210436 Functional Gain - WDFY2 ENSG00000139668 CDS Human protein_coding chr13:52234776 chr13:52234780 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_111085 0 0 2 BUD13 POSTAR2 ENCODE chr13:52234715-52234805
64251 chr8 106801079 106801079 1 + C G LUAD 106801075 + 106801055 106801095 41 CACAGAAGGGATGTACCCTGCACGCCTGCTGGACTCAATTC CACAGAAGGGATGTACCCTGCACGGCTGCTGGACTCAATTC < 41bp 0.461328953971592 0.740554937898745 0.11107433 0.12006125 prediction 0.481109875797491 Functional Gain - ZFPM2 ENSG00000169946 CDS Human protein_coding chr8:106801075 chr8:106801079 synonymous SNV . 0 25 hm5C_associated_SNPs_111094 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:106801064-106801085
64251 chr4 89527148 89527148 1 + T A UCEC 89527144 + 89527124 89527164 41 GGAAGATGGGGAAGTTTACACATGTGGTTTGAACACCAAGG GGAAGATGGGGAAGTTTACACATGAGGTTTGAACACCAAGG < 41bp 0.433897318032591 0.740545871722246 0.39921567 0.41391507 prediction 0.481091743444493 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89527144 chr4:89527148 stopgain 0.998 1 25 hm5C_associated_SNPs_111097 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr4:89527140-89527160
64251 chr14 77929028 77929028 1 + T C rs61755658 77929026 + 77929006 77929046 41 GATGAGCCTGACACAAATCTCGTGGCCTTAATGAAGGAAGA GATGAGCCTGACACAAATCTCGCGGCCTTAATGAAGGAAGA < 41bp 0.57134396772236 0.811886525530546 0.87778556 0.86736226 prediction 0.481085115616373 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77929026 chr14:77929028 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_111098 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:77929002-77929041
64251 chr3 56651569 56651569 1 + C A LIHC 56651568 + 56651548 56651588 41 CTCAAAACAGAGGCATTTCACCAGAAATTTTTCATTCATCT CTCAAAACAGAGGCATTTCACAAGAAATTTTTCATTCATCT < 41bp 0.493381338111281 0.740532158865042 0.25983182 0.5003387 prediction 0.481064317730083 Functional Gain - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56651568 chr3:56651569 nonsynonymous SNV 0.941 3 22 hm5C_associated_SNPs_111101 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:56651560-56651580
64251 chr2 27258858 27258858 1 + C T UCEC 27258857 + 27258837 27258877 41 GGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCAT GGGGAGTCACTACATGGTTACTGCATCTGTATCCAGGCCAT < 41bp 0.484609102332195 0.740531162013277 0.2988639 0.28498757 prediction 0.481062324026554 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258857 chr2:27258858 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_111102 0 0 1 DDX24 POSTAR2 ENCODE chr2:27258782-27258916
64251 chr18 71816287 71816287 1 + C G rs200022512 71816283 + 71816263 71816303 41 AAAGCAAAGGAGGATGGCAGCAAACAAGTGTCTGTGCACAG AAAGCAAAGGAGGATGGCAGCAAAGAAGTGTCTGTGCACAG < 41bp 0.584371250614756 0.82489753090269 0.12332833 0.19081014 prediction 0.481052560575866 Functional Gain - TIMM21 ENSG00000075336 CDS Human protein_coding chr18:71816283 chr18:71816287 nonsynonymous SNV 0.801 0 25 hm5C_associated_SNPs_111103 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr18:71816283-71816309
64251 chr6 26045674 26045674 1 + C G HNSC 26045670 + 26045650 26045690 41 GAAGCAAACAGCTCGCAAGTCTACCGGCGGCAAAGCTCCGC GAAGCAAACAGCTCGCAAGTCTACGGGCGGCAAAGCTCCGC < 41bp 0.576268819738908 0.816790644212759 0.1668613 0.33086938 prediction 0.481043648947702 Functional Gain - HIST1H3C ENSG00000196532 CDS Human other chr6:26045670 chr6:26045674 synonymous SNV . 0 25 hm5C_associated_SNPs_111104 0 0 3 DDX3X POSTAR2 ENCODE chr6:26045660-26045694
64251 chr17 76160881 76160881 1 + C A rs2292235 76160880 + 76160860 76160900 41 AGGGCAAAGAGCGGCCATCACCGCTTACGCATGACTCGAAG AGGGCAAAGAGCGGCCATCACAGCTTACGCATGACTCGAAG < 41bp 0.541228436315595 0.781748786488262 0.15353343 0.32172698 prediction 0.481040700345333 Functional Gain - C17orf99 ENSG00000187997 intronic Human protein_coding chr17:76160880 chr17:76160881 . . 0 22 hm5C_associated_SNPs_111105 0 0 1 DROSHA POSTAR2 ENCODE chr17:76160822-76160894
64251 chr16 2042696 2042696 1 + A G UCEC 2042693 + 2042673 2042713 41 TCCTCACCAATCAGTGGCAGCGCACGGCGCCAGGGCCGGCC TCCTCACCAATCAGTGGCAGCGCGCGGCGCCAGGGCCGGCC < 41bp 0.499345356999551 0.740517190966763 0.28264526 0.339175 prediction 0.481034381933525 Functional Gain - SYNGR3 ENSG00000127561 CDS Human protein_coding chr16:2042693 chr16:2042696 nonsynonymous SNV 0.891 1 24 hm5C_associated_SNPs_111106 0 0 3 DDX3X POSTAR2 ENCODE chr16:2042634-2042724
64251 chr1 169818687 169818687 1 + C A LIHC 169818683 + 169818663 169818703 41 CCTGTATGTTTGCCTTACTGCTAGCTGACAGGAGTTGGCTG CCTGTATGTTTGCCTTACTGCTAGATGACAGGAGTTGGCTG < 41bp 0.339659940778245 0.740517136455635 0.20137876 0.28656572 prediction 0.481034272911271 Functional Gain - C1orf112 ENSG00000000460 CDS Human protein_coding chr1:169818683 chr1:169818687 nonsynonymous SNV 0.137 0 25 hm5C_associated_SNPs_111107 0 0 1 DDX24 POSTAR2 ENCODE chr1:169818683-169818746
64251 chr12 113401156 113401156 1 + T C COAD 113401154 + 113401134 113401174 41 CCCGCTGATCCCACCTGGAACGTGGGCCACGGTAGCTGGGA CCCGCTGATCCCACCTGGAACGCGGGCCACGGTAGCTGGGA < 41bp 0.480222462688172 0.740505750505015 0.4480968 0.39391646 prediction 0.481011501010031 Functional Gain - OAS3 ENSG00000111331 CDS Human protein_coding chr12:113401154 chr12:113401156 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_111111 0 0 1 RPS3 POSTAR2 ENCODE chr12:113401143-113401186
64251 chr2 85872158 85872158 1 + T C UCEC 85872156 + 85872136 85872176 41 ACCTCATTGCCAACATCGTGCATGACGGCAAGCCCTCCGAG ACCTCATTGCCAACATCGTGCACGACGGCAAGCCCTCCGAG < 41bp 0.581511643926477 0.822010834840833 0.07980126 0.06584662 prediction 0.480998381828711 Functional Gain - USP39 ENSG00000168883 CDS Human protein_coding chr2:85872156 chr2:85872158 synonymous SNV . 0 23 hm5C_associated_SNPs_111115 0 0 5 GRWD1 POSTAR2 ENCODE chr2:85872141-85872202
64251 chr17 27064414 27064414 1 + A G STAD 27064411 + 27064391 27064431 41 CTGAGCTTCGCCAGCTGGTCCTGAGTCTACTCAGCCTGGAG CTGAGCTTCGCCAGCTGGTCCTGGGTCTACTCAGCCTGGAG < 41bp 0.532206930706191 0.772693011211652 0.21400893 0.39024872 prediction 0.480972161010922 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064411 chr17:27064414 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_111120 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:27064385-27064416
64251 chr19 12296973 12296973 1 + C A LIHC 12296972 + 12296952 12296992 41 ATTAAAGATCACTACAAACACCGAGGGAGAAATCTAAGGTA ATTAAAGATCACTACAAACACAGAGGGAGAAATCTAAGGTA < 41bp 0.535778152441475 0.776263342563137 0.34744498 0.8590664 prediction 0.480970380243323 Functional Gain - ZNF136 ENSG00000196646 CDS Human protein_coding chr19:12296972 chr19:12296973 synonymous SNV . 0 22 hm5C_associated_SNPs_111121 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:12296953-12296982
64251 chr1 161736217 161736217 1 + C G LUAD 161736213 + 161736193 161736233 41 TTTAGCCCGGGACTCTTTCACAGGCTGGATGAAGATTGGGG TTTAGCCCGGGACTCTTTCACAGGGTGGATGAAGATTGGGG < 41bp 0.574642375779491 0.815116076657335 0.6028626 0.9109612 prediction 0.480947401755688 Functional Gain - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161736213 chr1:161736217 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_111125 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161736197-161736220
64251 chr2 239308407 239308407 1 + C G rs115951410 239308406 + 239308386 239308426 41 CCTTTGCATGGGTGTGCATACCGAGAGACAGGCAGCTTAGG CCTTTGCATGGGTGTGCATACGGAGAGACAGGCAGCTTAGG < 41bp 0.44208503757834 0.740458060935074 0.5455288 0.73245555 prediction 0.480916121870149 Functional Gain - TRAF3IP1 ENSG00000204104 UTR3 Human protein_coding chr2:239308406 chr2:239308407 . . 0 22 hm5C_associated_SNPs_111130 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:239308367-239308410
64251 chr14 23311683 23311683 1 + C T COAD 23311682 + 23311662 23311702 41 GAGGCCATTCGCAAGGCGTTCCGCGTGTGGGAGAGTGCCAC GAGGCCATTCGCAAGGCGTTCTGCGTGTGGGAGAGTGCCAC < 41bp 0.488777370488631 0.740446669326219 0.8761784 0.79946274 prediction 0.480893338652438 Functional Gain - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23311682 chr14:23311683 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_111133 0 0 1 SND1 POSTAR2 ENCODE chr14:23311621-23311703
64251 chr20 35860734 35860734 1 + C T UCEC 35860733 + 35860713 35860753 41 GCCTGAGAAGAGGCCCCCCACCGTGGTGTCCAATACATTCA GCCTGAGAAGAGGCCCCCCACTGTGGTGTCCAATACATTCA < 41bp 0.528341966070316 0.768787446252225 0.15254489 0.06727263 prediction 0.48089096036382 Functional Gain - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35860733 chr20:35860734 synonymous SNV . 0 22 hm5C_associated_SNPs_111134 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:35860696-35860743
64251 chr15 67835066 67835066 1 + T A rs558185291 67835062 + 67835042 67835082 41 CCTTCCTCCTCCTCCTCTCGCCGCTACCGCCGTCGCCGCCG CCTTCCTCCTCCTCCTCTCGCCGCAACCGCCGTCGCCGCCG < 41bp 0.441292971540035 0.740443063331339 0.32286838 0.34223264 prediction 0.480886126662679 Functional Gain - MAP2K5 ENSG00000137764 UTR5 Human protein_coding chr15:67835062 chr15:67835066 . . 0 25 hm5C_associated_SNPs_111136 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585673 chr15:67835041-67835070
64251 chr11 8704754 8704754 1 + C T LUSC 8704753 + 8704733 8704773 41 AGCTTTTTCCACACAGCCATCCAGACTGAGGAAGACCCGGA AGCTTTTTCCACACAGCCATCTAGACTGAGGAAGACCCGGA < 41bp 0.5160790086476 0.756518317788633 0.4181788 0.21786031 prediction 0.480878618282067 Functional Gain - RPL27A ENSG00000166441 CDS Human protein_coding chr11:8704753 chr11:8704754 synonymous SNV . 0 22 hm5C_associated_SNPs_111137 0 0 16 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:8704736-8704766
64251 chr1 228400296 228400296 1 - G A OV 228400297 - 228400277 228400317 41 ACCAGCTGGCCGTCCTTCTTCCACACCGTCTCGGGCTTGGG ACCAGCTGGCCGTCCTTCTTCTACACCGTCTCGGGCTTGGG < 41bp 0.516107567041794 0.756544240213308 0.28401542 0.6855939 prediction 0.480873346343029 Functional Gain - OBSCN ENSG00000154358 CDS Human protein_coding chr1:228400297 chr1:228400296 stopgain 0.999 0 22 hm5C_associated_SNPs_111138 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:228400269-228400301
64251 chr19 41094577 41094577 1 + C T GBM 41094576 + 41094556 41094596 41 ACATGGTCTGTGACTCGCTTCCGCGGCATGATTTCCACCCA ACATGGTCTGTGACTCGCTTCTGCGGCATGATTTCCACCCA < 41bp 0.485579960812382 0.740431648028454 0.88759 0.29383403 prediction 0.480863296056908 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41094576 chr19:41094577 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_111140 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:41094538-41094584
64251 chr1 44134854 44134854 1 + C T SKCM 44134853 + 44134833 44134873 41 TGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCT TGAGTCAGAGTGAGCTCTTCCTCAAGGAGGATCTGAGTTCT < 41bp 0.556630548629721 0.797050098564569 0.18722576 0.19673184 prediction 0.480839099869695 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134853 chr1:44134854 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111142 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr11 118942531 118942531 1 + C A COAD 118942527 + 118942507 118942547 41 AGAGGCTACCTTATCATTGTCTCCCGTGACCGGAAGGTTTC AGAGGCTACCTTATCATTGTCTCCAGTGACCGGAAGGTTTC < 41bp 0.306212391280906 0.740418515391585 0.11554536 0.9472364 prediction 0.480837030783171 Functional Gain - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118942527 chr11:118942531 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_111143 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:118942522-118942563
64251 chr3 183860633 183860633 1 + C T rs148734067 183860632 + 183860612 183860652 41 AAAGTATGGATTCTGAGGAGCCGGACAGCCGGGGAGGCTCC AAAGTATGGATTCTGAGGAGCTGGACAGCCGGGGAGGCTCC < 41bp 0.541950332287392 0.782364506066804 0.6772346 0.23840004 prediction 0.480828347558824 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183860632 chr3:183860633 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_111144 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr3:183860572-183860663
64251 chr6 43607888 43607888 1 + C T UCEC 43607887 + 43607867 43607907 41 TCTTTGCACGGACACTAGTACCGCGAGTGCTGATTCTCCTT TCTTTGCACGGACACTAGTACTGCGAGTGCTGATTCTCCTT < 41bp 0.504099675160062 0.744509097080404 0.3511414 0.40957254 prediction 0.480818843840683 Functional Gain - MAD2L1BP ENSG00000124688 CDS Human protein_coding chr6:43607887 chr6:43607888 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_111146 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:43607860-43607889
64251 chr6 43038449 43038449 1 + C G ACC 43038448 + 43038428 43038468 41 AGGTCCTGGGCACGAATCATCCAGATGTGGCAAAACAGCTG AGGTCCTGGGCACGAATCATCGAGATGTGGCAAAACAGCTG < 41bp 0.623744795065388 0.864152382328837 0.4704051 0.81365 prediction 0.480815174526898 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43038448 chr6:43038449 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_111148 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:43038433-43038464
64251 chr1 111437624 111437624 1 + C A LUAD 111437620 + 111437600 111437640 41 AAGGGTCTGACCGACAGCATCCACCGTTACCACTCAGACAA AAGGGTCTGACCGACAGCATCCACAGTTACCACTCAGACAA < 41bp 0.324912028116141 0.740393840752833 0.0037146509 0.016286254 prediction 0.480787681505667 Functional Gain - CD53 ENSG00000143119 CDS Human protein_coding chr1:111437620 chr1:111437624 nonsynonymous SNV 0.013 1 25 hm5C_associated_SNPs_111157 0 0 3 LIN28B POSTAR2 ENCODE chr1:111437578-111437632
64251 chr12 53448110 53448110 1 + T C UCEC 53448108 + 53448088 53448128 41 TGGGACTTAGACCTCACCTACGTGACGGAGCGCATCTTGGC TGGGACTTAGACCTCACCTACGCGACGGAGCGCATCTTGGC < 41bp 0.470317387041052 0.740390252313415 0.27369177 0.34091383 prediction 0.480780504626831 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53448108 chr12:53448110 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_111160 0 0 2 GRWD1 POSTAR2 ENCODE chr12:53448107-53448167
64251 chrX 51639975 51639975 1 + C T COAD 51639974 + 51639954 51639994 41 TCCTGACTGGCCGCTACCACCCGACTGGCCACTGCCACCTG TCCTGACTGGCCGCTACCACCTGACTGGCCACTGCCACCTG < 41bp 0.510814026531584 0.751201034929146 0.08258507 0.09375721 prediction 0.480774016795124 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51639974 chrX:51639975 synonymous SNV . 0 22 hm5C_associated_SNPs_111163 0 0 2 RPS3 POSTAR2 ENCODE chrX:51639943-51639998
64251 chr2 44066243 44066243 1 + C A rs72647316 44066242 + 44066222 44066262 41 GCTGCCGAAAGGGGCCACTCCCCAGGATACCTCGGTGAGTG GCTGCCGAAAGGGGCCACTCCACAGGATACCTCGGTGAGTG < 41bp 0.543062882070576 0.78343888994504 0.3434262 0.82761395 prediction 0.480752015748928 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44066242 chr2:44066243 synonymous SNV . 0 22 hm5C_associated_SNPs_111166 1 0 1 DDX3X POSTAR2 ENCODE chr2:44066136-44066253
64251 chr6 31802804 31802804 1 + C G rs11548074 31802803 + 31802783 31802823 41 GCGCTGCCTTTGCGCAGCAGCCGGCGGGCGGCCACGTCGCG GCGCTGCCTTTGCGCAGCAGCGGGCGGGCGGCCACGTCGCG < 41bp 0.576194833637673 0.816568308409709 0.90787446 0.9151095 prediction 0.480746949544071 Functional Gain - C6orf48 ENSG00000204387 UTR5 Human protein_coding chr6:31802803 chr6:31802804 . . 0 22 hm5C_associated_SNPs_111168 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:31802694-31802944
64251 chr10 1043164 1043164 1 + C T SKCM 1043163 + 1043143 1043183 41 CCTAGTGCGTCAGCATTTATCCCGTTTGCCAACCATTGATC CCTAGTGCGTCAGCATTTATCTCGTTTGCCAACCATTGATC < 41bp 0.537952213616274 0.778322575717175 0.3308056 0.2562319 prediction 0.480740724201803 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1043163 chr10:1043164 synonymous SNV . 0 22 hm5C_associated_SNPs_111169 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:1043125-1043210
64251 chr8 145135291 145135291 1 + T C UCEC 145135289 + 145135269 145135309 41 CAGCCCTGGCGGACCTCAGCCATGTGGAGGAAGCAGCTGGT CAGCCCTGGCGGACCTCAGCCACGTGGAGGAAGCAGCTGGT < 41bp 0.538592577543301 0.778957492286276 0.41249204 0.32292256 prediction 0.480729829485948 Functional Gain - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135289 chr8:145135291 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_111170 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:145135220-145135300
64251 chr16 30939204 30939204 1 + C G CESC 30939200 + 30939180 30939220 41 CGCAAGGGCCCCCTGCCTGCCGGGCCCCCCCCGGAGGACGT CGCAAGGGCCCCCTGCCTGCCGGGGCCCCCCCGGAGGACGT < 41bp 0.582031102145813 0.822378163951923 0.52631164 0.9158863 prediction 0.480694123612221 Functional Gain - FBXL19 ENSG00000099364 CDS Human protein_coding chr16:30939200 chr16:30939204 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_111174 0 0 2 DDX6 POSTAR2 ENCODE chr16:30939171-30939211
64251 chr6 34826612 34826612 1 + C T rs61732794 34826611 + 34826591 34826631 41 GTACATTCCCCGGCCCATGTCCGCGTGAGGCTTGACCACTA GTACATTCCCCGGCCCATGTCTGCGTGAGGCTTGACCACTA < 41bp 0.485416160234367 0.740345760386322 0.8313304 0.3806282 prediction 0.480691520772643 Functional Gain - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34826611 chr6:34826612 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_111177 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:34826606-34826638
64251 chr1 101491514 101491514 1 + C G rs61742627 101491510 + 101491490 101491530 41 CAGGGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCGTGGA CAGGGCGGCGAAAGGTCAGTCGGCGGAGAGGAGTCCGTGGA < 41bp 0.595583131241504 0.835917864549273 0.6938133 0.88753015 prediction 0.480669466615537 Functional Gain - LOC102606465 ENSG00000233184 ncRNA_exonic Human antisense chr1:101491510 chr1:101491514 . . 0 25 hm5C_associated_SNPs_111183 0 0 3 DDX3X POSTAR2 ENCODE chr1:101491473-101491562
64251 chr11 120099614 120099614 1 + C A UCEC 120099613 + 120099593 120099633 41 GTTCGAGGCTCTGCCCAAGGCCTCAGAGCAGGCGGAGCTGC GTTCGAGGCTCTGCCCAAGGCATCAGAGCAGGCGGAGCTGC < 41bp 0.524616922021931 0.764949567884271 0.22264618 0.46651855 prediction 0.480665291724681 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120099613 chr11:120099614 synonymous SNV . 0 22 hm5C_associated_SNPs_111185 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:120099613-120099614
64251 chr1 212273760 212273760 1 + C G LUAD 212273759 + 212273739 212273779 41 TAAAACCTCTCCTGCCAAGGCCCGGTCTCCCATCAACAGAA TAAAACCTCTCCTGCCAAGGCGCGGTCTCCCATCAACAGAA < 41bp 0.42778628419114 0.740319531321409 0.101002514 0.2505952 prediction 0.480639062642817 Functional Gain - DTL ENSG00000143476 CDS Human protein_coding chr1:212273759 chr1:212273760 synonymous SNV . 0 22 hm5C_associated_SNPs_111190 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:212273700-212273760
64251 chr2 109421374 109421374 1 + C T SKCM 109421373 + 109421353 109421393 41 TGCAGAAGTTGAACACTTAACCGAAGTTCTTAAGGAAAAGA TGCAGAAGTTGAACACTTAACTGAAGTTCTTAAGGAAAAGA < 41bp 0.508318305487397 0.748636964761152 0.38889775 0.23438287 prediction 0.480637318547509 Functional Gain - CCDC138 ENSG00000163006 CDS Human protein_coding chr2:109421373 chr2:109421374 synonymous SNV . 0 22 hm5C_associated_SNPs_111191 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr2:109421345-109421382
64251 chr1 204091108 204091108 1 + C A UCEC 204091104 + 204091084 204091124 41 GGGGCCATGGCCACCCACCACCCCCTGCAGGTACCGCCCTC GGGGCCATGGCCACCCACCACCCCATGCAGGTACCGCCCTC < 41bp 0.311444097604287 0.740311651613284 0.1437822 0.19150957 prediction 0.480623303226567 Functional Gain - SOX13 ENSG00000143842 CDS Human protein_coding chr1:204091104 chr1:204091108 nonsynonymous SNV 0.971 1 25 hm5C_associated_SNPs_111193 0 0 1 PRPF8 POSTAR2 ENCODE chr1:204091103-204091152
64251 chr1 93811917 93811917 1 + C G rs3087457 93811916 + 93811896 93811936 41 ACACGAAGGTGGTTCCCCAGCCGCTCAAATTTCCGGACCAC ACACGAAGGTGGTTCCCCAGCGGCTCAAATTTCCGGACCAC < 41bp 0.562709897695295 0.803015014871121 0.35859025 0.5180392 prediction 0.480610234351653 Functional Gain - DR1 ENSG00000117505 UTR5 Human protein_coding chr1:93811916 chr1:93811917 . . 0 22 hm5C_associated_SNPs_111194 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:93811898-93811937
64251 chr17 73818663 73818663 1 + C G SKCM 73818659 + 73818639 73818679 41 CAGGGCCAGGGGCTGCCGAGCTGGCCCGACTTCGGCAAGAG CAGGGCCAGGGGCTGCCGAGCTGGGCCGACTTCGGCAAGAG < 41bp 0.599957381987624 0.840255219363549 0.2670765 0.623201 prediction 0.48059567475185 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73818659 chr17:73818663 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_111195 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:73818645-73818689
64251 chr9 119461612 119461612 1 + C A UCEC 119461611 + 119461591 119461631 41 GAGGGCACCGTCTACTTCACCCAGGGCTTAGGCCTCAATCT GAGGGCACCGTCTACTTCACCAAGGGCTTAGGCCTCAATCT < 41bp 0.516692739509908 0.756985428113428 0.17510587 0.620477 prediction 0.48058537720704 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461611 chr9:119461612 nonsynonymous SNV 0.976 3 22 hm5C_associated_SNPs_111197 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr9:119461606-119461637
64251 chr3 9406890 9406890 1 + T A READ 9406886 + 9406866 9406906 41 CACTATTGGAGCCACTGTACCTACTGGCTTTGAGCAAACAG CACTATTGGAGCCACTGTACCTACAGGCTTTGAGCAAACAG < 41bp 0.407394632358445 0.74027183637229 0.11177468 0.5849345 prediction 0.480543672744579 Functional Gain - THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9406886 chr3:9406890 synonymous SNV . 0 25 hm5C_associated_SNPs_111203 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9406752-9406950
64251 chr19 34832392 34832392 1 + C A BLCA 34832388 + 34832368 34832408 41 AGATCTGTGATTTTGGCAACCAGGCTGACCTGCCTTCTGGA AGATCTGTGATTTTGGCAACCAGGATGACCTGCCTTCTGGA < 41bp 0.330104703721221 0.740227761458157 0.89586914 0.90232265 prediction 0.480455522916313 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34832388 chr19:34832392 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_111211 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34832363-34832399
64251 chr6 160212105 160212105 1 + C A SKCM 160212104 + 160212084 160212124 41 CCTGGAGCTTTTATCTGTAGCCAGGAAAGAGCGGGGCTGGC CCTGGAGCTTTTATCTGTAGCAAGGAAAGAGCGGGGCTGGC < 41bp 0.541310422857179 0.78153543065209 0.74667597 0.639313 prediction 0.480450015589821 Functional Gain - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160212104 chr6:160212105 synonymous SNV . 0 22 hm5C_associated_SNPs_111212 0 0 3 RPS3 POSTAR2 ENCODE chr6:160212099-160212161
64251 chr1 17265457 17265457 1 + C A rs373070567 17265456 + 17265436 17265476 41 GCTGAGCGGCTCTGAGCGCACCGCGGATGCTTCCAACGGCA GCTGAGCGGCTCTGAGCGCACAGCGGATGCTTCCAACGGCA < 41bp 0.492679631602219 0.740216344255651 0.8917835 0.88888514 prediction 0.480432688511302 Functional Gain - CROCC ENSG00000058453 CDS Human protein_coding chr1:17265456 chr1:17265457 synonymous SNV . 0 22 hm5C_associated_SNPs_111214 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr1:17265441-17265466
64251 chr18 77170874 77170874 1 + C A PRAD 77170873 + 77170853 77170893 41 ACTCGTACCCGTACGCGTCCCCCCAGACGTCGCCATGGCAG ACTCGTACCCGTACGCGTCCCACCAGACGTCGCCATGGCAG < 41bp 0.500241855027564 0.740454240749975 0.088584036 0.04960364 prediction 0.480424771444822 Functional Gain - NFATC1 ENSG00000131196 CDS Human protein_coding chr18:77170873 chr18:77170874 nonsynonymous SNV 0.191 4 22 hm5C_associated_SNPs_111216 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr18:77170871-77170907
64251 chr5 154183804 154183804 1 + T C UCEC 154183802 + 154183782 154183822 41 AGACACAGTTCAAACCCACCCTTGGAGAGCCATGTGGGCTG AGACACAGTTCAAACCCACCCTCGGAGAGCCATGTGGGCTG < 41bp 0.453304699351737 0.740197700103743 0.049637973 0.077216715 prediction 0.480395400207487 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154183802 chr5:154183804 nonsynonymous SNV 0.952 1 23 hm5C_associated_SNPs_111221 0 0 31 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:154183776-154183833
64251 chr14 31358870 31358870 1 + T G HNSC 31358868 + 31358848 31358888 41 GCTTGGGCACCTCTGGATGACCTGAAAGATATGGCTTCTAA GCTTGGGCACCTCTGGATGACCGGAAAGATATGGCTTCTAA < 41bp 0.418613023023502 0.740191153612506 0.09665689 0.28128862 prediction 0.480382307225012 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31358868 chr14:31358870 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_111223 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:31358824-31358874
64251 chr17 33313129 33313129 1 + C T rs3744356 33313128 + 33313108 33313148 41 TTTGTCACCAGTACCAATCCCCGGAAATTTTCTGGCTTTTC TTTGTCACCAGTACCAATCCCTGGAAATTTTCTGGCTTTTC < 41bp 0.495496201699852 0.740184130402623 0.17089483 0.1239351 prediction 0.480368260805245 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33313128 chr17:33313129 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_111225 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:33313106-33313129
64251 chr16 81727074 81727074 1 + C T UCEC 81727073 + 81727053 81727093 41 GTACGTGATTCAGAGGTTCGCCGAAGACCCCAGGCAAGAGG GTACGTGATTCAGAGGTTCGCTGAAGACCCCAGGCAAGAGG < 41bp 0.528826162167665 0.768998909815026 0.48245195 0.33206058 prediction 0.480345495294721 Functional Gain - CMIP ENSG00000153815 CDS Human protein_coding chr16:81727073 chr16:81727074 synonymous SNV . 0 22 hm5C_associated_SNPs_111230 0 0 6 BUD13 POSTAR2 ENCODE chr16:81727015-81727107
64251 chr10 77167870 77167870 1 + C A rs533708261 77167869 + 77167849 77167889 41 CAAAGGCTAGCAAAACCCCGCCGCGGCGCGCTCGGCCCCGG CAAAGGCTAGCAAAACCCCGCAGCGGCGCGCTCGGCCCCGG < 41bp 0.522472822684996 0.762636677055552 0.4241577 0.79006803 prediction 0.480327708741112 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167869 chr10:77167870 . . 0 22 hm5C_associated_SNPs_111233 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:77167862-77167894
64251 chrX 48661159 48661159 1 + C A COAD 48661158 + 48661138 48661178 41 GCGAAGAAGTAGGCAGAACCCCCAGTCGCCCCCTCAGGACT GCGAAGAAGTAGGCAGAACCCACAGTCGCCCCCTCAGGACT < 41bp 0.514682130610005 0.754834840052824 0.13126695 0.19298512 prediction 0.480305418885639 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48661158 chrX:48661159 synonymous SNV . 0 22 hm5C_associated_SNPs_111236 0 0 3 DDX24 POSTAR2 ENCODE chrX:48661154-48661187
64251 chr12 69651683 69651683 1 + C T SKCM 69651682 + 69651662 69651702 41 GAGGGCCACCCCCACCTTTTCCAGGTAAAACTTTTCTTAAA GAGGGCCACCCCCACCTTTTCTAGGTAAAACTTTTCTTAAA < 41bp 0.504745293526805 0.744879183071313 0.91920924 0.88448685 prediction 0.480267779089015 Functional Gain - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69651682 chr12:69651683 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111240 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:69651634-69651685
64251 chr3 127785866 127785866 1 + C A UCEC 127785862 + 127785842 127785882 41 CAGTACAACACCTATCCCATCAAGCTCTTCTATACGTCCAA CAGTACAACACCTATCCCATCAAGATCTTCTATACGTCCAA < 41bp 0.330105682990643 0.74013307983245 0.118398905 0.238951 prediction 0.480266159664899 Functional Gain - SEC61A1 ENSG00000058262 CDS Human protein_coding chr3:127785862 chr3:127785866 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_111242 0 0 19 PTBP1 POSTAR2 GSE42701,GSM1048186 chr3:127785840-127785880
64251 chr7 45928591 45928591 1 + C G rs41258845 45928590 + 45928570 45928610 41 GAGTCTGACGCCTCCGCTCCCCATGCTGCAGGTACCACAGT GAGTCTGACGCCTCCGCTCCCGATGCTGCAGGTACCACAGT < 41bp 0.434273839512111 0.740121238584267 0.028024822 0.11407256 prediction 0.480242477168533 Functional Gain - IGFBP1 ENSG00000146678 CDS Human protein_coding chr7:45928590 chr7:45928591 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_111248 0 0 4 BUD13 POSTAR2 ENCODE chr7:45928568-45928641
64251 chrX 47442890 47442890 1 + T A LGG 47442886 + 47442866 47442906 41 ATAGCCCCCAGCAGGGCCTGCACCTGTGTCCCACCCCACCC ATAGCCCCCAGCAGGGCCTGCACCAGTGTCCCACCCCACCC < 41bp 0.599215811405826 0.839334172840179 0.12193149 0.2638924 prediction 0.480236722868705 Functional Gain - TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47442886 chrX:47442890 nonsynonymous SNV 0.993 5 25 hm5C_associated_SNPs_111249 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chrX:47442890-47442891
64251 chr3 128627081 128627081 1 + C T UCEC 128627080 + 128627060 128627100 41 CCTGACGGGTCTGCAGCATGCCGGCCGCATCCTGACTACCA CCTGACGGGTCTGCAGCATGCTGGCCGCATCCTGACTACCA < 41bp 0.51236540523806 0.752483326961841 0.30321527 0.13363928 prediction 0.480235843447563 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128627080 chr3:128627081 synonymous SNV . 0 22 hm5C_associated_SNPs_111250 0 0 4 GRWD1 POSTAR2 ENCODE chr3:128627035-128627093
64251 chr9 101594124 101594124 1 + C A UCEC 101594123 + 101594103 101594143 41 GACTGGAACACCTTCGAATACCTGGGGAACTCCGGGGAGCC GACTGGAACACCTTCGAATACATGGGGAACTCCGGGGAGCC < 41bp 0.551127894345802 0.791236351684021 0.40300632 0.30152535 prediction 0.480216914676439 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101594123 chr9:101594124 nonsynonymous SNV 0.983 1 22 hm5C_associated_SNPs_111254 0 0 1 DDX24 POSTAR2 ENCODE chr9:101594118-101594152
64251 chr19 3207654 3207654 1 + C A UCEC 3207653 + 3207633 3207673 41 AGCCTCCTCTACAAGACCGTCCAGAGGCTGCTCGTGAAGGC AGCCTCCTCTACAAGACCGTCAAGAGGCTGCTCGTGAAGGC < 41bp 0.488376600868107 0.740093499020825 0.39304635 0.4792204 prediction 0.48018699804165 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3207653 chr19:3207654 nonsynonymous SNV 0.682 0 22 hm5C_associated_SNPs_111256 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:3207640-3207660
64251 chr11 47605951 47605951 1 + C T SKCM 47605950 + 47605930 47605970 41 GCAAATTTGACCTGAACAGCCCCTGGGAGGCTTTCCCAGTC GCAAATTTGACCTGAACAGCCTCTGGGAGGCTTTCCCAGTC < 41bp 0.485946788366511 0.740078644944948 0.15001458 0.19481865 prediction 0.480157289889897 Functional Gain - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47605950 chr11:47605951 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_111260 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47605889-47605959
64251 chr6 158514091 158514091 1 + C A THCA 158514090 + 158514070 158514110 41 CCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCCATCAAGA CCTTCCCCGTCGGCCCCCACCAAGAGTTCCTGCCATCAAGA < 41bp 0.482803356138277 0.740075947461717 0.74045736 0.5165618 prediction 0.480151894923435 Functional Gain - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158514090 chr6:158514091 synonymous SNV . 0 22 hm5C_associated_SNPs_111261 0 0 1 PCBP2 POSTAR2 ENCODE chr6:158514032-158514128
64251 chr16 8942941 8942941 1 + C G rs78698557 8942940 + 8942920 8942960 41 GGCCAGGGGAGCCCAGGCTGCCCTGCACTCCTGCCTCCCAG GGCCAGGGGAGCCCAGGCTGCGCTGCACTCCTGCCTCCCAG < 41bp 0.56177478437518 0.801843532994722 0.04507622 0.103551835 prediction 0.480137497239085 Functional Gain - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942940 chr16:8942941 . . 0 22 hm5C_associated_SNPs_111264 1 0 3 RBM15 POSTAR2 ENCODE chr16:8942859-8942965
64251 chr22 39917955 39917955 1 + C A rs140428747 39917954 + 39917934 39917974 41 AGGAGACTAATAAGCAGCCCCCCCAGACGGTGAACCCAATT AGGAGACTAATAAGCAGCCCCACCAGACGGTGAACCCAATT < 41bp 0.493477059426741 0.740064707582277 0.018857718 0.02381149 prediction 0.480129415164555 Functional Gain - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917954 chr22:39917955 nonsynonymous SNV 0.920 3 22 hm5C_associated_SNPs_111266 0 0 50 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39917794-39917992
64251 chr3 140979081 140979081 1 + C T UCEC 140979080 + 140979060 140979100 41 GCGCTGCTGGCCTTTGTGAGCCTCAGCCTGCAGTTCTGTGA GCGCTGCTGGCCTTTGTGAGCTTCAGCCTGCAGTTCTGTGA < 41bp 0.535537941888342 0.775586094031299 0.095133275 0.09182325 prediction 0.480096304285914 Functional Gain - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:140979080 chr3:140979081 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111270 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:140979054-140979092
64251 chr3 158289035 158289035 1 + T A rs3817373 158289031 + 158289011 158289051 41 AGCTCTTGTCGCGGCCGCGGCGAGTTAACATCGTTTTTCCA AGCTCTTGTCGCGGCCGCGGCGAGATAACATCGTTTTTCCA < 41bp 0.585857334090973 0.825889810624896 0.77732325 0.87477463 prediction 0.480064953067846 Functional Gain - MLF1 ENSG00000178053 UTR5 Human protein_coding chr3:158289031 chr3:158289035 . . 0 25 hm5C_associated_SNPs_111274 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334288 chr3:158289025-158289043
64251 chr5 150838456 150838456 1 + C T SKCM 150838455 + 150838435 150838475 41 GGCCTCAACAACCTCTCCTCCCCGGGCTCCTACCAGCGCTT GGCCTCAACAACCTCTCCTCCTCGGGCTCCTACCAGCGCTT < 41bp 0.487976370169915 0.740029223852159 0.4872517 0.25576338 prediction 0.480058447704318 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150838455 chr5:150838456 nonsynonymous SNV 0.076 0 22 hm5C_associated_SNPs_111277 0 0 1 ZNF622 POSTAR2 ENCODE chr5:150838383-150838492
64251 chr17 79987052 79987052 1 + C T rs200279065 79987051 + 79987031 79987071 41 GCTGGAGGCGGCGCGGCTGTCCCTGGAGGAGGTGAGTGCCC GCTGGAGGCGGCGCGGCTGTCTCTGGAGGAGGTGAGTGCCC < 41bp 0.491163828403909 0.740021514627107 0.21682099 0.26630402 prediction 0.480043029254213 Functional Gain - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79987051 chr17:79987052 synonymous SNV . 0 22 hm5C_associated_SNPs_111281 0 0 5 GRWD1 POSTAR2 ENCODE chr17:79986982-79987055
64251 chr8 87568537 87568537 1 + C T SKCM 87568536 + 87568516 87568556 41 GTGGCCATCAGAGATATTGTCCAGTTTGTGCCTTTCAGACA GTGGCCATCAGAGATATTGTCTAGTTTGTGCCTTTCAGACA < 41bp 0.50924577190513 0.749242888379065 0.34306192 0.27993113 prediction 0.479994232947871 Functional Gain - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87568536 chr8:87568537 stopgain 1.000 1 22 hm5C_associated_SNPs_111291 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:87568524-87568554
64251 chr8 109489022 109489022 1 + C T KIRP 109489021 + 109489001 109489041 41 TTTTTAACAGGTTAAGTATACCCAAGGTGGACTTGAAAACC TTTTTAACAGGTTAAGTATACTCAAGGTGGACTTGAAAACC < 41bp 0.508082578971313 0.748070975813544 0.022101164 0.0429613 prediction 0.479976793684463 Functional Gain - EMC2 ENSG00000104412 CDS Human protein_coding chr8:109489021 chr8:109489022 synonymous SNV . 0 22 hm5C_associated_SNPs_111294 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221660 chr8:109489021-109489022
64251 chr12 14577701 14577701 1 + C A STAD 14577697 + 14577677 14577717 41 TGATGAGCTGACTTCTGAATCAACCTTTGATCGTACCTTTG TGATGAGCTGACTTCTGAATCAACATTTGATCGTACCTTTG < 41bp 0.330433919911313 0.739979359818011 0.07848814 0.11564511 prediction 0.479958719636022 Functional Gain - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577697 chr12:14577701 synonymous SNV . 0 25 hm5C_associated_SNPs_111295 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:14577662-14577925
64251 chr11 119044368 119044368 1 + C A LUSC 119044367 + 119044347 119044387 41 TGGCCCTGGAGCATCAGCCACCCCAGGCCGGGCTCCCCCCA TGGCCCTGGAGCATCAGCCACACCAGGCCGGGCTCCCCCCA < 41bp 0.546716708936042 0.786691458756742 0.42949554 0.36419764 prediction 0.4799494996414 Functional Gain - NLRX1 ENSG00000160703 CDS Human protein_coding chr11:119044367 chr11:119044368 nonsynonymous SNV 0.025 1 22 hm5C_associated_SNPs_111301 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:119044368-119044369
64251 chr9 71094402 71094402 1 + C T HNSC 71094401 + 71094381 71094421 41 TGGCTCTCCATTATTGCTGCCCGGAAGCAGAGTGTGGAGGA TGGCTCTCCATTATTGCTGCCTGGAAGCAGAGTGTGGAGGA < 41bp 0.536988223065169 0.776923729813576 0.28985208 0.26528233 prediction 0.479871013496812 Functional Gain - PGM5 ENSG00000154330 CDS Human protein_coding chr9:71094401 chr9:71094402 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111314 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr9:71094380-71094403
64251 chr10 77167276 77167276 1 + C A COAD 77167275 + 77167255 77167295 41 CTCTGCCAGTGCTTCGGAAACCCGCCTGGCCAGGTTCGCCC CTCTGCCAGTGCTTCGGAAACACGCCTGGCCAGGTTCGCCC < 41bp 0.485445753572768 0.739926904492056 0.13195664 0.21814528 prediction 0.479853808984113 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167275 chr10:77167276 . . 0 22 hm5C_associated_SNPs_111318 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr10:77167259-77167278
64251 chr13 100741416 100741416 1 + C A rs200714802 100741412 + 100741392 100741432 41 CGGGACAGCACCGCTGGTCGCTGCCGGACGGCGTGGGCGGT CGGGACAGCACCGCTGGTCGCTGCAGGACGGCGTGGGCGGT < 41bp 0.666941743884713 0.906858993390793 0.44012332 0.6604744 prediction 0.479834499012159 Functional Gain - PCCA ENSG00000175198 CDS Human protein_coding chr13:100741412 chr13:100741416 synonymous SNV . 0 25 hm5C_associated_SNPs_111321 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:100741388-100741417
64251 chr2 132289306 132289306 1 + A G COAD 132289303 + 132289283 132289323 41 AGCTGACGTCTCCCAGAAGGCGGACCTGGAAGAGGAGCCCC AGCTGACGTCTCCCAGAAGGCGGGCCTGGAAGAGGAGCCCC < 41bp 0.52458868725293 0.764504815512324 0.30289248 0.40474597 prediction 0.479832256518788 Functional Gain - CCDC74A ENSG00000163040 CDS Human protein_coding chr2:132289303 chr2:132289306 nonsynonymous SNV 0.070 2 24 hm5C_associated_SNPs_111322 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:132289282-132289320
64251 chr19 50354605 50354605 1 + C A rs563641001 50354601 + 50354581 50354621 41 CCGCCATGGTCCGTCCGCGCCGTGCCCCGTACCGCTCCGGC CCGCCATGGTCCGTCCGCGCCGTGACCCGTACCGCTCCGGC < 41bp 0.655259061170703 0.895174042414174 0.24222326 0.23919502 prediction 0.479829962486943 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50354601 chr19:50354605 nonsynonymous SNV 0.964 1 25 hm5C_associated_SNPs_111323 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:50354600-50354620
64251 chr2 120194863 120194863 1 + C A rs555879458 120194859 + 120194839 120194879 41 GGTGTCTTTCGTCCTCTCCTCCGGCGGGCTCCTGGGTTTTG GGTGTCTTTCGTCCTCTCCTCCGGAGGGCTCCTGGGTTTTG < 41bp 0.348392802308721 0.739913152537143 0.8208176 0.8545876 prediction 0.479826305074286 Functional Gain - TMEM37 ENSG00000171227 CDS Human protein_coding chr2:120194859 chr2:120194863 synonymous SNV . 0 25 hm5C_associated_SNPs_111324 0 0 1 RPS3 POSTAR2 ENCODE chr2:120194838-120194913
64251 chr11 36250825 36250825 1 + C A THCA 36250821 + 36250801 36250841 41 GGGAGTGCCAACAGTGCCAGCTCCCAGGCAGCCAGCAGCCT GGGAGTGCCAACAGTGCCAGCTCCAAGGCAGCCAGCAGCCT < 41bp 0.316775613447631 0.739909684491862 0.15498725 0.9131795 prediction 0.479819368983724 Functional Gain - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36250821 chr11:36250825 nonsynonymous SNV 0.981 1 25 hm5C_associated_SNPs_111325 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:36250812-36250842
64251 chr12 85677592 85677592 1 + C T UCEC 85677591 + 85677571 85677611 41 GTCTTTCAGAAAACTCATTACCCGGATGTGTATGTCAGAGA GTCTTTCAGAAAACTCATTACTCGGATGTGTATGTCAGAGA < 41bp 0.555242373323188 0.795147943692016 0.13790372 0.1417923 prediction 0.479811140737656 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85677591 chr12:85677592 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_111327 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:85677577-85677648
64251 chr19 7532411 7532411 1 + C A rs568740656 7532410 + 7532390 7532430 41 GCGGCTGGAGCAGGAGCGGGCCGAGCTGGAGCGCCAGCGCC GCGGCTGGAGCAGGAGCGGGCAGAGCTGGAGCGCCAGCGCC < 41bp 0.51599202397017 0.755893356312038 0.8566026 0.91178185 prediction 0.479802664683736 Functional Gain - ARHGEF18 ENSG00000104880;ENSG00000268861 CDS Human other chr19:7532410 chr19:7532411 synonymous SNV . 0 22 hm5C_associated_SNPs_111331 0 0 1 BUD13 POSTAR2 ENCODE chr19:7532380-7532449
64251 chr8 42176801 42176801 1 + C T UCEC 42176800 + 42176780 42176820 41 CCCTGCAGGATGAATCTCCTCCGAAACAACAGCTGCCTCTC CCCTGCAGGATGAATCTCCTCTGAAACAACAGCTGCCTCTC < 41bp 0.529314127040448 0.769211355877504 0.47629964 0.30720806 prediction 0.479794457674111 Functional Gain - IKBKB ENSG00000104365 CDS Human protein_coding chr8:42176800 chr8:42176801 stopgain 1.000 1 22 hm5C_associated_SNPs_111332 0 0 3 SF3A3 POSTAR2 ENCODE chr8:42176741-42176807
64251 chr10 86259706 86259706 1 + C T UCEC 86259705 + 86259685 86259725 41 CCACGGACTGTTCCACCGCACCGCAGACAGAGTGAGTCTGT CCACGGACTGTTCCACCGCACTGCAGACAGAGTGAGTCTGT < 41bp 0.485391429178406 0.739894067051397 0.050806046 0.10098335 prediction 0.479788134102795 Functional Gain - CCSER2 ENSG00000107771 CDS Human protein_coding chr10:86259705 chr10:86259706 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111333 0 0 1 U2AF2 POSTAR2 ENCODE chr10:86259595-86259706
64251 chr1 43232997 43232997 1 + C A rs193038877 43232993 + 43232973 43233013 41 AGGCGCTGTCATGGAGGACGCCGCCGCGCCGGGGCGGACCG AGGCGCTGTCATGGAGGACGCCGCAGCGCCGGGGCGGACCG < 41bp 0.664865484180459 0.904754722301931 0.5704415 0.67416 prediction 0.479778476242944 Functional Gain - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43232993 chr1:43232997 synonymous SNV . 0 25 hm5C_associated_SNPs_111334 0 0 3 DDX3X POSTAR2 ENCODE chr1:43232964-43233036
64251 chr16 1411761 1411761 1 + C A UCEC 1411757 + 1411737 1411777 41 CTTCCAGGACCCGTGCATCTCTTCCGACTCTCGGGCAAGTG CTTCCAGGACCCGTGCATCTCTTCAGACTCTCGGGCAAGTG < 41bp 0.309372502308327 0.739884066500593 0.09137896 0.4831116 prediction 0.479768133001186 Functional Gain - GNPTG ENSG00000090581 CDS Human protein_coding chr16:1411757 chr16:1411761 synonymous SNV . 0 25 hm5C_associated_SNPs_111336 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr16:1411754-1411775
64251 chr12 38710573 38710573 1 + T A rs12304754 38710569 + 38710549 38710589 41 CTCCCAGCATCCTTTGCCTTCCGGTATGTGGCCCCGTCTGG CTCCCAGCATCCTTTGCCTTCCGGAATGTGGCCCCGTCTGG < 41bp 0.561792603339445 0.801675574472675 0.22433013 0.2867723 prediction 0.479765942266461 Functional Gain - ALG10B ENSG00000175548 UTR5 Human protein_coding chr12:38710569 chr12:38710573 . . 0 25 hm5C_associated_SNPs_111338 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819216 chr12:38710572-38710573
64251 chr4 184367674 184367674 1 + C A UCEC 184367670 + 184367650 184367690 41 GAGTGCTTTGGAAGGCTCTTCAGCCTCAGCTTCTCAAAGCA GAGTGCTTTGGAAGGCTCTTCAGCATCAGCTTCTCAAAGCA < 41bp 0.344316127020178 0.739879853284323 0.07011545 0.11085117 prediction 0.479759706568646 Functional Gain - CDKN2AIP ENSG00000168564 CDS Human protein_coding chr4:184367670 chr4:184367674 synonymous SNV . 0 25 hm5C_associated_SNPs_111340 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr4:184367673-184367695
64251 chr3 128621403 128621403 1 + T C STAD 128621401 + 128621381 128621421 41 CTGTTCTCCCTGCAGGTGGCCATGAACATCCTCAACAGCGG CTGTTCTCCCTGCAGGTGGCCACGAACATCCTCAACAGCGG < 41bp 0.579758095898293 0.819608556279652 0.08629045 0.06378248 prediction 0.479700920762718 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128621401 chr3:128621403 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_111350 0 0 3 DDX24 POSTAR2 ENCODE chr3:128621399-128621458
64251 chr17 33593207 33593207 1 + A G rs12150001 33593204 + 33593184 33593224 41 TGTGTGTGTGTGTGCGCGCGCGCACGTGCACATGTGTGTAG TGTGTGTGTGTGTGCGCGCGCGCGCGTGCACATGTGTGTAG < 41bp 0.499503430714776 0.739829992392348 0.08461785 0.1507883 prediction 0.479659984784697 Functional Gain - SLFN5 ENSG00000166750 UTR3 Human protein_coding chr17:33593204 chr17:33593207 . . 0 24 hm5C_associated_SNPs_111353 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:33593139-33593265
64251 chr19 36256009 36256009 1 + A G rs200193402 36256006 + 36255986 36256026 41 TTCCTCATTCCCCACCAGCTCTGATGGCCTCTCTCCCTTCT TTCCTCATTCCCCACCAGCTCTGGTGGCCTCTCTCCCTTCT < 41bp 0.543702880908126 0.783508881755238 0.21714708 0.5649653 prediction 0.479612001694224 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256006 chr19:36256009 nonsynonymous SNV 0.049 2 24 hm5C_associated_SNPs_111363 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:36255982-36256014
64251 chr2 74077640 74077640 1 + T C rs138161537 74077638 + 74077618 74077658 41 TCATCACACTGGGCTGGATTCATGTAAGCAATTCTGAGCTG TCATCACACTGGGCTGGATTCACGTAAGCAATTCTGAGCTG < 41bp 0.568870046345185 0.808675472896506 0.54655695 0.54561853 prediction 0.479610853102642 Functional Gain - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74077638 chr2:74077640 synonymous SNV . 0 23 hm5C_associated_SNPs_111364 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74077610-74077641
64251 chr20 45353966 45353966 1 + C T SKCM 45353965 + 45353945 45353985 41 GACCCTGGGCCTGGCTGGTTCCCTGGCCTGGCTGGTCCTGG GACCCTGGGCCTGGCTGGTTCTCTGGCCTGGCTGGTCCTGG < 41bp 0.525564000508652 0.765354419805913 0.3404 0.26373896 prediction 0.479580838594523 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45353965 chr20:45353966 synonymous SNV . 0 22 hm5C_associated_SNPs_111365 0 0 2 XPO5 POSTAR2 ENCODE chr20:45353931-45354016
64251 chr22 17983998 17983998 1 + C G LUAD 17983994 + 17983974 17984014 41 CTTCGAGAACGGCAGCTCTACAAGCTCCTCAGTGAGGACTT CTTCGAGAACGGCAGCTCTACAAGGTCCTCAGTGAGGACTT < 41bp 0.445399869630232 0.739771133030449 0.08672848 0.21113059 prediction 0.479542266060898 Functional Gain - CECR2 ENSG00000099954 CDS Human protein_coding chr22:17983994 chr22:17983998 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_111368 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:17983995-17984030
64251 chr12 57892012 57892012 1 + T G rs569333899 57892010 + 57891990 57892030 41 ACGTCAACAATGTCCCCCACCTTGGGAACATCATTGGTTGT ACGTCAACAATGTCCCCCACCTGGGGAACATCATTGGTTGT < 41bp 0.392350085657592 0.739767027681953 0.010906011 0.13384572 prediction 0.479534055363906 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57892010 chr12:57892012 synonymous SNV . 0 23 hm5C_associated_SNPs_111369 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr12:57891951-57892013
64251 chr7 64864692 64864692 1 + T C LIHC 64864690 + 64864670 64864710 41 AGTTCTCAACCCTTATTACACATCAGATAATTTATACTGGA AGTTCTCAACCCTTATTACACACCAGATAATTTATACTGGA < 41bp 0.479588443956871 0.739762592908603 0.021405816 0.019442528 prediction 0.479525185817206 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64864690 chr7:64864692 synonymous SNV . 0 23 hm5C_associated_SNPs_111371 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:64864660-64864695
64251 chr16 223546 223546 1 + C A HNSC 223545 + 223525 223565 41 ACCCCTGCGGTGCACGCCTCCCTGGACAAGTTCCTGGCTTC ACCCCTGCGGTGCACGCCTCCATGGACAAGTTCCTGGCTTC < 41bp 0.538441126013037 0.778202993796812 0.28678852 0.23424229 prediction 0.479523735567549 Functional Gain - HBA2 ENSG00000188536 CDS Human protein_coding chr16:223545 chr16:223546 nonsynonymous SNV 0.655 2 22 hm5C_associated_SNPs_111372 0 0 1 DDX55 POSTAR2 ENCODE chr16:223542-223578
64251 chr14 94568224 94568224 1 + C G rs117094493 94568223 + 94568203 94568243 41 CTTCACCTCAGTAGGAATCGCCGCATCCTCCATAGCAGCCA CTTCACCTCAGTAGGAATCGCGGCATCCTCCATAGCAGCCA < 41bp 0.634768229716293 0.874528755222982 0.09007883 0.8970122 prediction 0.479521051013376 Functional Gain - IFI27L1 ENSG00000165948 CDS Human protein_coding chr14:94568223 chr14:94568224 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_111373 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:94568205-94568231
64251 chr7 90012362 90012362 1 + T C UCEC 90012360 + 90012340 90012380 41 CAGATGCCCAAGATAAGTTCCATGAATTGATGAGCCAGCTC CAGATGCCCAAGATAAGTTCCACGAATTGATGAGCCAGCTC < 41bp 0.459760809383848 0.73975196096614 0.16624245 0.1194295 prediction 0.47950392193228 Functional Gain - GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:90012360 chr7:90012362 synonymous SNV . 0 23 hm5C_associated_SNPs_111375 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:90012334-90012367
64251 chr19 33870260 33870260 1 + C A UCEC 33870259 + 33870239 33870279 41 CCTCAGCTGGTGCCTGCTGGCCCTGGGGGAGGAGGCAAAGC CCTCAGCTGGTGCCTGCTGGCACTGGGGGAGGAGGCAAAGC < 41bp 0.531526432768012 0.771271176791904 0.26905805 0.6959549 prediction 0.479489488047783 Functional Gain - CEBPG ENSG00000153879 CDS Human protein_coding chr19:33870259 chr19:33870260 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_111376 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33870043-33870391
64251 chr11 44097105 44097105 1 + C G BLCA 44097101 + 44097081 44097121 41 TGTCCTGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCA TGTCCTGAATGGTGGTGCCTCGCTGTTCTCTGCTCTGGCCA < 41bp 0.448671797046987 0.739738783278739 0.39499614 0.30491626 prediction 0.479477566557479 Functional Gain - ACCS ENSG00000110455 CDS Human protein_coding chr11:44097101 chr11:44097105 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_111378 0 0 1 DDX24 POSTAR2 ENCODE chr11:44097092-44097139
64251 chr17 4487861 4487861 1 + C A rs147623005 4487857 + 4487837 4487877 41 AGCTGCGGAGCTCGGATCTTCTCCCCCGTCTGGCCCGCTCT AGCTGCGGAGCTCGGATCTTCTCCACCGTCTGGCCCGCTCT < 41bp 0.390418359801474 0.739738758486537 0.832067 0.94819444 prediction 0.479477516973074 Functional Gain - SMTNL2 ENSG00000188176 UTR5 Human protein_coding chr17:4487857 chr17:4487861 . . 0 25 hm5C_associated_SNPs_111379 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:4487851-4487870
64251 chr1 109419841 109419841 1 + C A rs35520362 109419837 + 109419817 109419857 41 CACCGCGTACCCGGGACCCGCCCGCCCGCGGGAGGTGAGCG CACCGCGTACCCGGGACCCGCCCGACCGCGGGAGGTGAGCG < 41bp 0.38962058463858 0.739722239929977 0.3368084 0.2907265 prediction 0.479444479859953 Functional Gain - GPSM2 ENSG00000121957 UTR5 Human protein_coding chr1:109419837 chr1:109419841 . . 0 25 hm5C_associated_SNPs_111386 0 0 3 DDX3X POSTAR2 ENCODE chr1:109419817-109419850
64251 chr2 110373255 110373255 1 + C A UCEC 110373254 + 110373234 110373274 41 ATCAAGAACCTGGTGGGAGCCCTGGACGAGGGTGACGGGGA ATCAAGAACCTGGTGGGAGCCATGGACGAGGGTGACGGGGA < 41bp 0.534470640714477 0.774190503162233 0.37795314 0.48419982 prediction 0.479439724895513 Functional Gain - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373254 chr2:110373255 nonsynonymous SNV 0.982 2 22 hm5C_associated_SNPs_111389 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:110373237-110373258
64251 chr15 50475055 50475055 1 + T A rs540863847 50475051 + 50475031 50475071 41 ACAACATCCGCGCGAAGTCCCTGCTGCACTGCTTCCAGTGC ACAACATCCGCGCGAAGTCCCTGCAGCACTGCTTCCAGTGC < 41bp 0.638174559260569 0.877869068741601 0.13640901 0.2148326 prediction 0.479389018962065 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50475051 chr15:50475055 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_111394 0 0 3 SND1 POSTAR2 ENCODE chr15:50475015-50475101
64251 chr17 48540598 48540598 1 + A G UCEC 48540595 + 48540575 48540615 41 CCAACATTTTAGGAGAGCGCCTGAAACTGCATGAGAAGGTG CCAACATTTTAGGAGAGCGCCTGGAACTGCATGAGAAGGTG < 41bp 0.502913351337054 0.742604086244193 0.053596646 0.23991778 prediction 0.479381469814279 Functional Gain - ACSF2 ENSG00000167107 CDS Human protein_coding chr17:48540595 chr17:48540598 nonsynonymous SNV 0.212 0 24 hm5C_associated_SNPs_111396 0 0 1 GRWD1 POSTAR2 ENCODE chr17:48540579-48540613
64251 chr11 66287216 66287216 1 + C G KIRC 66287215 + 66287195 66287235 41 CGAGGCCTTCACCATTTTAGCCAAGGTCAGCGTCAGGTCTG CGAGGCCTTCACCATTTTAGCGAAGGTCAGCGTCAGGTCTG < 41bp 0.424218200903256 0.739689340488425 0.8742336 0.9105613 prediction 0.479378680976851 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66287215 chr11:66287216 synonymous SNV . 0 22 hm5C_associated_SNPs_111397 0 0 2 PRPF8 POSTAR2 ENCODE chr11:66287213-66287262
64251 chr5 141305053 141305053 1 + C T UCEC 141305052 + 141305032 141305072 41 TGCCTTCCAATGGATGTCTTCCCGTGTCTCCCCGAACACCC TGCCTTCCAATGGATGTCTTCTCGTGTCTCCCCGAACACCC < 41bp 0.542767859067162 0.782451514437359 0.23485437 0.20665675 prediction 0.479367310740396 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141305052 chr5:141305053 synonymous SNV . 0 22 hm5C_associated_SNPs_111399 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221667 chr5:141305040-141305060
64251 chr11 118960443 118960443 1 + C T SKCM 118960442 + 118960422 118960462 41 ACCTGCCCACTGTGCTTCCTCCTGGCTTCACCATCGGAGCC ACCTGCCCACTGTGCTTCCTCTTGGCTTCACCATCGGAGCC < 41bp 0.532773377683298 0.77245487519014 0.34434375 0.1313009 prediction 0.479362995013685 Functional Gain - HMBS ENSG00000256269 CDS Human protein_coding chr11:118960442 chr11:118960443 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_111400 0 0 7 BUD13 POSTAR2 ENCODE chr11:118960435-118960481
64251 chr11 102195710 102195710 1 + T C STAD 102195708 + 102195688 102195728 41 GCAAATCAAGATTTTTCTGCCTTGATGAGAAGTTCCTACCA GCAAATCAAGATTTTTCTGCCTCGATGAGAAGTTCCTACCA < 41bp 0.569038896841192 0.808719845911144 0.068110645 0.5259952 prediction 0.479361898139902 Functional Gain - BIRC3 ENSG00000023445 CDS Human protein_coding chr11:102195708 chr11:102195710 nonsynonymous SNV 0.035 0 23 hm5C_associated_SNPs_111401 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:102195680-102195720
64251 chrX 44923000 44923000 1 + C T LAML 44922999 + 44922979 44923019 41 GCACTCACTCTACCTCATAACCGCACAAACCTGACCAGCAG GCACTCACTCTACCTCATAACTGCACAAACCTGACCAGCAG < 41bp 0.492773869855179 0.73968069607412 0.15211785 0.16836897 prediction 0.47936139214824 Functional Gain - KDM6A ENSG00000147050 CDS Human protein_coding chrX:44922999 chrX:44923000 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_111402 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:44922975-44923011
64251 chr11 251895 251895 1 + C T SKCM 251894 + 251874 251914 41 GACGAGGTGGACAAACGAGTCCACATGACCTGGGTGCAGCC GACGAGGTGGACAAACGAGTCTACATGACCTGGGTGCAGCC < 41bp 0.55919649083178 0.798870290614298 0.19782552 0.867524 prediction 0.479347599565038 Functional Gain - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:251894 chr11:251895 nonsynonymous SNV 0.861 2 22 hm5C_associated_SNPs_111407 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:251890-251919
64251 chr11 65745103 65745103 1 + T C GBM 65745101 + 65745081 65745121 41 AACAAGTCGCTGCCCTCAGCCGTGTACTGCATCGAGGATAA AACAAGTCGCTGCCCTCAGCCGCGTACTGCATCGAGGATAA < 41bp 0.475833062329988 0.739670163387191 0.14052898 0.17840987 prediction 0.479340326774382 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65745101 chr11:65745103 nonsynonymous SNV 0.967 0 23 hm5C_associated_SNPs_111408 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr11:65745099-65745109
64251 chr12 6495275 6495275 1 + C A rs2364480 6495274 + 6495254 6495294 41 CCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCT CCACTGCGTCCCCTGCAAGGCAGGGCACTTCCAGAATACCT < 41bp 0.475640364099157 0.739647239100756 0.08692554 0.22378492 prediction 0.479294478201512 Functional Gain - LTBR ENSG00000111321 CDS Human protein_coding chr12:6495274 chr12:6495275 synonymous SNV . 0 22 hm5C_associated_SNPs_111415 0 0 2 RBM47 POSTAR2 GSE58380,GSM1409656 chr12:6495264-6495285
64251 chr6 35253954 35253954 1 + C A rs142852591 35253953 + 35253933 35253973 41 CCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGTGA CCAGCTCGAGGATGGGACCACAGCATACATTCACCAGGTGA < 41bp 0.480083116184015 0.739640597879008 0.54358643 0.7180829 prediction 0.479281195758015 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35253953 chr6:35253954 synonymous SNV . 0 22 hm5C_associated_SNPs_111416 0 0 2 BUD13 POSTAR2 ENCODE chr6:35253889-35253983
64251 chr21 42694963 42694963 1 + C G rs528828387 42694962 + 42694942 42694982 41 TCCAGTGCTGCCTATAGCATCCGCAGCATCGGGGAGAGGCC TCCAGTGCTGCCTATAGCATCGGCAGCATCGGGGAGAGGCC < 41bp 0.620595028166398 0.86023286647758 0.0858174 0.4524321 prediction 0.479275676622364 Functional Gain - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42694962 chr21:42694963 nonsynonymous SNV 0.013 0 22 hm5C_associated_SNPs_111417 0 0 2 DDX3X POSTAR2 ENCODE chr21:42694920-42694994
64251 chr20 49196284 49196284 1 + C A rs2230604 49196283 + 49196263 49196303 41 CGAGGACCTGGAGCCCCCACCCGAGCATATCCCCCCACCTC CGAGGACCTGGAGCCCCCACCAGAGCATATCCCCCCACCTC < 41bp 0.4724883755049 0.739634218873068 0.3803151 0.87656534 prediction 0.479268437746136 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49196283 chr20:49196284 synonymous SNV . 0 22 hm5C_associated_SNPs_111418 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:49196254-49196288
64251 chr10 24762349 24762349 1 + C T SKCM 24762348 + 24762328 24762368 41 GTTCCTGGCAATGCCACCATCCCCAGGGACAGAATCTCCAG GTTCCTGGCAATGCCACCATCTCCAGGGACAGAATCTCCAG < 41bp 0.511439531082498 0.751067476641691 0.07118681 0.97264683 prediction 0.479255891118386 Functional Gain - KIAA1217 ENSG00000120549 CDS Human protein_coding chr10:24762348 chr10:24762349 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111421 0 0 1 GRWD1 POSTAR2 ENCODE chr10:24762251-24762376
64251 chr19 39868276 39868276 1 + C T rs200993250 39868275 + 39868255 39868295 41 ATGGGGCCCCGGGGGAACCACCGCTGCCAGGTGCTGAGCCT ATGGGGCCCCGGGGGAACCACTGCTGCCAGGTGCTGAGCCT < 41bp 0.493127736623744 0.739620141634283 0.29808226 0.27233917 prediction 0.479240283268567 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868275 chr19:39868276 nonsynonymous SNV 0.202 0 22 hm5C_associated_SNPs_111425 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:39868257-39868287
64251 chr10 72637975 72637975 1 + C G rs76223172 72637971 + 72637951 72637991 41 CAGGGCACAGATCGACCAAGCTGCCGTTCCCTATTCTGCAG CAGGGCACAGATCGACCAAGCTGCGGTTCCCTATTCTGCAG < 41bp 0.439132732376445 0.739601285657727 0.052850634 0.09105644 prediction 0.479202571315454 Functional Gain - SGPL1 ENSG00000166224 UTR3 Human protein_coding chr10:72637971 chr10:72637975 . . 0 25 hm5C_associated_SNPs_111428 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:72637882-72638005
64251 chr19 10217248 10217248 1 + C G rs11559190 10217244 + 10217224 10217264 41 CGAGGCCTATGCCGCGAACCCGCACTCGTTCGTGTTCACGC CGAGGCCTATGCCGCGAACCCGCAGTCGTTCGTGTTCACGC < 41bp 0.591109590377913 0.830705992132834 0.17713547 0.36842072 prediction 0.479192803509842 Functional Gain - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10217244 chr19:10217248 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_111432 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10217232-10217270
64251 chr16 28846988 28846988 1 + C A UCEC 28846987 + 28846967 28847007 41 CGGGACCTTCTGCCCAGTCCCCTCAGAGCAGCTTCCCCCAG CGGGACCTTCTGCCCAGTCCCATCAGAGCAGCTTCCCCCAG < 41bp 0.506470367720749 0.746062286824532 0.20822456 0.37687543 prediction 0.479183838207567 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28846987 chr16:28846988 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111434 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:28846980-28847000
64251 chr1 2334561 2334561 1 + T A LUAD 2334557 + 2334537 2334577 41 GATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGG GATGCCGGCAAGGCCTTCGCCAGCAAGAAGCGGGACTGAGG < 41bp 0.636559584156831 0.876150402702224 0.34683558 0.13321564 prediction 0.479181637090786 Functional Gain - RER1 ENSG00000157916 CDS Human protein_coding chr1:2334557 chr1:2334561 stoploss 0.038 0 25 hm5C_associated_SNPs_111436 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:2334549-2334580
64251 chr13 111371582 111371582 1 + T C UCEC 111371580 + 111371560 111371600 41 TCCTTCTTGCCCCCAGAGATCCTGAAGGAGCTAGACGAGTG TCCTTCTTGCCCCCAGAGATCCCGAAGGAGCTAGACGAGTG < 41bp 0.475558520034234 0.739576792515994 0.1889275 0.23419759 prediction 0.479153585031988 Functional Gain - ING1 ENSG00000153487 CDS Human protein_coding chr13:111371580 chr13:111371582 nonsynonymous SNV 0.747 4 23 hm5C_associated_SNPs_111441 0 0 1 BUD13 POSTAR2 ENCODE chr13:111371528-111371620
64251 chr1 151140731 151140731 1 + C T COAD 151140730 + 151140710 151140750 41 ACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCT ACCTGCGGCTGGCCCACAGGCTGAGGAGTCAGCAACTGTCT < 41bp 0.511421517808572 0.750998167487998 0.20445803 0.18382007 prediction 0.479153299358851 Functional Gain - SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151140730 chr1:151140731 synonymous SNV . 0 22 hm5C_associated_SNPs_111442 0 0 1 DDX55 POSTAR2 ENCODE chr1:151140606-151140803
64251 chr9 132569553 132569553 1 + C A rs1043178 132569552 + 132569532 132569572 41 CGAGATGGATAAATTGCACCCCGGGATCATTGACGCAATCA CGAGATGGATAAATTGCACCCAGGGATCATTGACGCAATCA < 41bp 0.550929355558183 0.790501506748007 0.40046743 0.9044985 prediction 0.479144302379648 Functional Gain - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132569552 chr9:132569553 synonymous SNV . 0 22 hm5C_associated_SNPs_111444 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr9:132569524-132569559
64251 chr11 780004 780004 1 + C G rs112040806 780000 + 779980 780020 41 CTCCAAGAGGCCAGCCTCTGCTCCCCGCCTCTCTACCCCTG CTCCAAGAGGCCAGCCTCTGCTCCGCGCCTCTCTACCCCTG < 41bp 0.446737282835731 0.739570476932401 0.065701574 0.17597455 prediction 0.479140953864802 Functional Gain - LOC171391 ENSG00000255284 intronic Human lincRNA chr11:780000 chr11:780004 . . 0 25 hm5C_associated_SNPs_111446 0 0 1 DGCR8 POSTAR2 ENCODE chr11:779994-780056
64251 chr20 3562803 3562803 1 + T G UCEC 3562801 + 3562781 3562821 41 GTCCAAGCTCACCTTAACCCCATGGGTCGGCCTTCGGAAGA GTCCAAGCTCACCTTAACCCCAGGGGTCGGCCTTCGGAAGA < 41bp 0.390047418049968 0.739560073563282 0.53928685 0.9285251 prediction 0.479120147126563 Functional Gain - ATRN ENSG00000088812 CDS Human protein_coding chr20:3562801 chr20:3562803 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_111451 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr20:3562803-3562804
64251 chr11 34074601 34074601 1 + C G rs549142438 34074597 + 34074577 34074617 41 TGCGCGGGGGGCTCCGGGTTCAACCGACCGCCTCGTGGAGT TGCGCGGGGGGCTCCGGGTTCAACGGACCGCCTCGTGGAGT < 41bp 0.440752092591942 0.73955377965665 0.7313812 0.7700299 prediction 0.479107559313301 Functional Gain - CAPRIN1 ENSG00000135387 UTR5 Human protein_coding chr11:34074597 chr11:34074601 . . 0 25 hm5C_associated_SNPs_111453 0 0 2 FASTKD2 POSTAR2 ENCODE chr11:34074598-34074648
64251 chr19 45452002 45452002 1 + C G LUAD 45452001 + 45451981 45452021 41 CAGCAAGATGAGATGCCTAGCCCGACCTTCCTCACCCAGGT CAGCAAGATGAGATGCCTAGCGCGACCTTCCTCACCCAGGT < 41bp 0.630405063880632 0.869955959921919 0.22940487 0.43763086 prediction 0.479101792082575 Functional Gain - APOC2 ENSG00000224916;ENSG00000234906 CDS Human other chr19:45452001 chr19:45452002 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_111455 0 0 5 DDX3X POSTAR2 ENCODE chr19:45451987-45452037
64251 chr15 55632978 55632978 1 + C T UCEC 55632977 + 55632957 55632997 41 TATCTAGCACCAAAGAGATACCGGATACTTTTGGTGACTGT TATCTAGCACCAAAGAGATACTGGATACTTTTGGTGACTGT < 41bp 0.526668696984342 0.766199452434109 0.25055796 0.5963415 prediction 0.479061510899534 Functional Gain - PIGB ENSG00000069943 CDS Human protein_coding chr15:55632977 chr15:55632978 nonsynonymous SNV 0.303 1 22 hm5C_associated_SNPs_111461 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:55632973-55633010
64251 chrX 48759276 48759276 1 + C A OV 48759275 + 48759255 48759295 41 CTCCCCACATGACCCCAACTCCGTGGTTACCAAATCGGCCA CTCCCCACATGACCCCAACTCAGTGGTTACCAAATCGGCCA < 41bp 0.503363877808855 0.742884771506944 0.209463 0.43862435 prediction 0.479041787396178 Functional Gain - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759275 chrX:48759276 synonymous SNV . 0 22 hm5C_associated_SNPs_111466 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:48759238-48759280
64251 chr11 10796810 10796810 1 + C G rs75206030 10796809 + 10796789 10796829 41 AAACAGAAAATGGCCCCAAACCAAAAAAACGACGTCCACCA AAACAGAAAATGGCCCCAAACGAAAAAAACGACGTCCACCA < 41bp 0.426779793098544 0.739510438661979 0.8822833 0.6213133 prediction 0.479020877323958 Functional Gain - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10796809 chr11:10796810 nonsynonymous SNV 0.786 0 22 hm5C_associated_SNPs_111469 0 0 2 CPSF6 POSTAR2 ENCODE chr11:10796753-10796837
64251 chr14 60558689 60558689 1 + C G rs182830303 60558688 + 60558668 60558708 41 TCAGGGCGTCTCGGCTTTCCCCGCTGCTGCTTCTGCTAGGC TCAGGGCGTCTCGGCTTTCCCGGCTGCTGCTTCTGCTAGGC < 41bp 0.611042121242695 0.850542673463463 0.8313484 0.92473984 prediction 0.479001104441536 Functional Gain - PCNX4 ENSG00000126773 UTR5 Human protein_coding chr14:60558688 chr14:60558689 . . 0 22 hm5C_associated_SNPs_111473 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:60558669-60558702
64251 chr7 2695756 2695756 1 + A G COAD 2695753 + 2695733 2695773 41 TCCTCCGCGTCCAGGAGGTGCTGAATGGCACGGAGGTGAAC TCCTCCGCGTCCAGGAGGTGCTGGATGGCACGGAGGTGAAC < 41bp 0.503201875595283 0.742695018935765 0.8507268 0.89677924 prediction 0.478986286680965 Functional Gain - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2695753 chr7:2695756 nonsynonymous SNV 0.901 3 24 hm5C_associated_SNPs_111475 0 0 3 BUD13 POSTAR2 ENCODE chr7:2695725-2695766
64251 chr1 41232309 41232309 1 + C G rs145113974 41232308 + 41232288 41232328 41 GCTGCAGTATATCCGCTTAGCCCAGCCTGTATCAGGCACTC GCTGCAGTATATCCGCTTAGCGCAGCCTGTATCAGGCACTC < 41bp 0.43362910535641 0.739492322984605 0.1580793 0.43569458 prediction 0.47898464596921 Functional Gain - NFYC ENSG00000066136 CDS Human protein_coding chr1:41232308 chr1:41232309 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111476 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:41232284-41232317
64251 chr6 28268649 28268649 1 + C T SKCM 28268648 + 28268628 28268668 41 TATGCTGCAGGAGACATTACCCGAAAAGGGAGAAAAAAAGA TATGCTGCAGGAGACATTACCTGAAAAGGGAGAAAAAAAGA < 41bp 0.496629981402532 0.739488296094424 0.048480153 0.048342258 prediction 0.478976592188848 Functional Gain - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28268648 chr6:28268649 stopgain 0.816 0 22 hm5C_associated_SNPs_111478 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:28268625-28268661
64251 chr12 27107157 27107157 1 + T C UCEC 27107155 + 27107135 27107175 41 TTGTTGAAAGATTAAGAGATCATGACGATGCAGCAGAATCT TTGTTGAAAGATTAAGAGATCACGACGATGCAGCAGAATCT < 41bp 0.581239853066467 0.820724514373153 0.028739959 0.026488453 prediction 0.478969322613371 Functional Gain - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27107155 chr12:27107157 synonymous SNV . 0 23 hm5C_associated_SNPs_111481 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:27107156-27107185
64251 chr2 219674417 219674417 1 + C T BLCA 219674416 + 219674396 219674436 41 ATGCGGCAAGAGGGCAAGTACCCAGTACGGAACGACATGGA ATGCGGCAAGAGGGCAAGTACTCAGTACGGAACGACATGGA < 41bp 0.471209170064855 0.73947025263037 0.30122638 0.5090622 prediction 0.478940505260739 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219674416 chr2:219674417 nonsynonymous SNV 0.944 4 22 hm5C_associated_SNPs_111488 0 0 1 GRWD1 POSTAR2 ENCODE chr2:219674373-219674481
64251 chr2 239353021 239353021 1 + C A READ 239353020 + 239353000 239353040 41 ACGTCAACCACCACCTGACTCCTGATGTCCAGCCTCGATTC ACGTCAACCACCACCTGACTCATGATGTCCAGCCTCGATTC < 41bp 0.553714865858282 0.79318174176417 0.21766955 0.34079427 prediction 0.478933751811777 Functional Gain - ASB1 ENSG00000065802 CDS Human protein_coding chr2:239353020 chr2:239353021 nonsynonymous SNV 0.959 1 22 hm5C_associated_SNPs_111491 0 0 4 BUD13 POSTAR2 ENCODE chr2:239352922-239353057
64251 chr2 219290476 219290476 1 + C T UCEC 219290475 + 219290455 219290495 41 AAGGGCCGGGCTGTGCAGCACCGCGAGGTCCAGGGCAACGA AAGGGCCGGGCTGTGCAGCACTGCGAGGTCCAGGGCAACGA < 41bp 0.479235838573409 0.739458468359055 0.16397244 0.1575009 prediction 0.478916936718109 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219290475 chr2:219290476 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_111495 0 0 2 PPIG POSTAR2 ENCODE chr2:219290438-219290490
64251 chr2 238973090 238973090 1 + C T SKCM 238973089 + 238973069 238973109 41 TGTGGGAAGCCTGGGGAAATCCCAGCAGCCCGTATTCAGCA TGTGGGAAGCCTGGGGAAATCTCAGCAGCCCGTATTCAGCA < 41bp 0.487533202014168 0.739458420153858 0.2834717 0.19493547 prediction 0.478916840307716 Functional Gain - SCLY ENSG00000132330 CDS Human protein_coding chr2:238973089 chr2:238973090 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_111496 0 0 4 GRWD1 POSTAR2 ENCODE chr2:238972999-238973112
64251 chr5 137517307 137517307 1 + C T rs372207043 137517306 + 137517286 137517326 41 CTCCCTTCTCAGGGTTGTGTCCGTATTGAGAATGTGGAGAC CTCCCTTCTCAGGGTTGTGTCTGTATTGAGAATGTGGAGAC < 41bp 0.486255109193937 0.739450547743691 0.1804102 0.21982056 prediction 0.478901095487383 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137517306 chr5:137517307 nonsynonymous SNV 0.223 0 22 hm5C_associated_SNPs_111498 0 0 2 EFTUD2 POSTAR2 ENCODE chr5:137517295-137517321
64251 chr11 20385887 20385887 1 + T C UCEC 20385885 + 20385865 20385905 41 GGAGAAACCGGCAGAGTGCTCTTAAAGGAAATCCTGGAGCA GGAGAAACCGGCAGAGTGCTCTCAAAGGAAATCCTGGAGCA < 41bp 0.57101827406162 0.810453898121553 0.13413069 0.35823077 prediction 0.478871248119867 Functional Gain - HTATIP2 ENSG00000109854 CDS Human protein_coding chr11:20385885 chr11:20385887 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_111502 0 0 9 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:20385868-20385891
64251 chr13 108881908 108881908 1 + C T SKCM 108881907 + 108881887 108881927 41 TGGAGACAATTCACCCTATTCCCCAACTATAATTTATTTTC TGGAGACAATTCACCCTATTCTCCAACTATAATTTATTTTC < 41bp 0.485504577680943 0.73943545243882 0.04449877 0.93247694 prediction 0.478870904877639 Functional Gain - ABHD13 ENSG00000139826 CDS Human protein_coding chr13:108881907 chr13:108881908 synonymous SNV . 0 22 hm5C_associated_SNPs_111503 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:108881875-108881935
64251 chr7 141464307 141464307 1 + C T rs149232525 141464306 + 141464286 141464326 41 AAAATCGCCAGTTTCTCTCACCCCACATTCCTCTGGCTCAA AAAATCGCCAGTTTCTCTCACTCCACATTCCTCTGGCTCAA < 41bp 0.513474817022194 0.752888964870883 0.2783054 0.9271798 prediction 0.478828295697378 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464306 chr7:141464307 nonsynonymous SNV 0.432 1 22 hm5C_associated_SNPs_111507 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:141464297-141464320
64251 chr6 24418700 24418700 1 + T C UCEC 24418698 + 24418678 24418718 41 CTCCTCTCCAGCCACCGAAACGTGATGATGAGGTTGAATCT CTCCTCTCCAGCCACCGAAACGCGATGATGAGGTTGAATCT < 41bp 0.60596343796125 0.845370419154859 0.3030916 0.7992221 prediction 0.478813962387219 Functional Gain - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24418698 chr6:24418700 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_111508 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr6:24418694-24418718
64251 chr8 17104724 17104724 1 + C A rs192180882 17104720 + 17104700 17104740 41 TGGGAGAAGCAGGCCAGAGCCTTCCAGGGCCTCCGGCCCGT TGGGAGAAGCAGGCCAGAGCCTTCAAGGGCCTCCGGCCCGT < 41bp 0.578594029339523 0.817985117396782 0.3533132 0.8780515 prediction 0.478782176114519 Functional Gain - VPS37A ENSG00000155975 UTR5 Human protein_coding chr8:17104720 chr8:17104724 . . 0 25 hm5C_associated_SNPs_111511 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:17104724-17104725
64251 chr1 110168320 110168320 1 + C T SKCM 110168319 + 110168299 110168339 41 TCACTGGCTGAGAGCGAGCTCCGTAGTGCCCCGTATGAGTT TCACTGGCTGAGAGCGAGCTCTGTAGTGCCCCGTATGAGTT < 41bp 0.526545768590853 0.765925541306787 0.22648492 0.16036731 prediction 0.478759545431869 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168319 chr1:110168320 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_111515 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:110168292-110168322
64251 chr10 70450796 70450796 1 + C T SKCM 70450795 + 70450775 70450815 41 TTTCAGAAAGAAGCAGCACTCCCCACTGTACGATGCCTTCG TTTCAGAAAGAAGCAGCACTCTCCACTGTACGATGCCTTCG < 41bp 0.542263087637519 0.781640693242958 0.21167412 0.9105382 prediction 0.478755211210878 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70450795 chr10:70450796 nonsynonymous SNV 0.913 0 22 hm5C_associated_SNPs_111516 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:70450796-70450797
64251 chr22 38355452 38355452 1 + C T COAD 38355451 + 38355431 38355471 41 ATGACCAAGTACGAGCGAGCCCGCGTGCTGGGCACCCGAGC ATGACCAAGTACGAGCGAGCCTGCGTGCTGGGCACCCGAGC < 41bp 0.537667473240759 0.777038033004328 0.5920265 0.6121198 prediction 0.478741119527137 Functional Gain - POLR2F ENSG00000100142 CDS Human protein_coding chr22:38355451 chr22:38355452 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_111517 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:38355416-38355478
64251 chr11 57575738 57575738 1 + C T ESCA 57575737 + 57575717 57575757 41 GAAGCCTCAGCTGGAGCTATCCAGAACTTGTGTGCTGGGCG GAAGCCTCAGCTGGAGCTATCTAGAACTTGTGTGCTGGGCG < 41bp 0.519306489625143 0.758671594982078 0.4842214 0.35377526 prediction 0.478730210713871 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57575737 chr11:57575738 stopgain 1.000 1 22 hm5C_associated_SNPs_111518 0 0 10 CSTF2T POSTAR2 GSE37401,GSM917677 chr11:57575716-57575743
64251 chr2 235943705 235943705 1 + A G UCEC 235943702 + 235943682 235943722 41 TGGCCTCCCTCGCTGCAAGTCAGAGGGGACCCTGATTGACC TGGCCTCCCTCGCTGCAAGTCAGGGGGGACCCTGATTGACC < 41bp 0.511816981031457 0.75118151133425 0.908143 0.9319946 prediction 0.478729060605586 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235943702 chr2:235943705 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_111519 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:235943696-235943719
64251 chr4 184938369 184938369 1 + C T SKCM 184938368 + 184938348 184938388 41 TTCCGAGCGAGCGCGGAGCCCCCGACAAATGAAGCTGAGAA TTCCGAGCGAGCGCGGAGCCCTCGACAAATGAAGCTGAGAA < 41bp 0.562046400271956 0.801406478750068 0.14567038 0.4838853 prediction 0.478720156956224 Functional Gain - STOX2 ENSG00000173320 CDS Human protein_coding chr4:184938368 chr4:184938369 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_111520 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr4:184938354-184938385
64251 chr10 81107275 81107275 1 + C G rs529951834 81107274 + 81107254 81107294 41 GTTTGAGTTCTGTGTTCTCCCCGCCCGTGTCCCGCCCGACC GTTTGAGTTCTGTGTTCTCCCGGCCCGTGTCCCGCCCGACC < 41bp 0.487261697115785 0.739345906271173 0.48333326 0.87542427 prediction 0.478691812542347 Functional Gain - PPIF ENSG00000108179 UTR5 Human protein_coding chr10:81107274 chr10:81107275 . . 0 22 hm5C_associated_SNPs_111525 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819212 chr10:81107220-81107280
64251 chr18 47340423 47340423 1 + C A rs191949319 47340419 + 47340399 47340439 41 TTGGGCCGCCGAGCTGGACCCGGACCGGTTTTGGGTACTGT TTGGGCCGCCGAGCTGGACCCGGAACGGTTTTGGGTACTGT < 41bp 0.644332002110056 0.883663914076657 0.8048073 0.84770644 prediction 0.478663823933203 Functional Gain - SCARNA17;SNHG22 ENSG00000267322 ncRNA_exonic Human antisense chr18:47340419 chr18:47340423 . . 0 25 hm5C_associated_SNPs_111528 0 0 19 FBL POSTAR2 GSE43666,GSM1067865 chr18:47340380-47340434
64251 chr6 46632580 46632580 1 + C A UCEC 46632576 + 46632556 46632596 41 AGGAATACGAGGGCTTTGGGCAGGCTGGGTACCCAATATAC AGGAATACGAGGGCTTTGGGCAGGATGGGTACCCAATATAC < 41bp 0.683983387025585 0.923313121882288 0.7189622 0.81944317 prediction 0.478659469713406 Functional Gain - SLC25A27 ENSG00000153291 CDS Human protein_coding chr6:46632576 chr6:46632580 synonymous SNV . 0 25 hm5C_associated_SNPs_111529 0 0 1 HNRNPD POSTAR2 GSE52971,GSM1279666 chr6:46632564-46632595
64251 chr3 50005100 50005100 1 + C T OV 50005099 + 50005079 50005119 41 GCTATGGAGCTAGAGACGGACCGCATGGTGACTATCGAGGA GCTATGGAGCTAGAGACGGACTGCATGGTGACTATCGAGGA < 41bp 0.540883246563616 0.780202973449091 0.022933096 0.11938277 prediction 0.47863945377095 Functional Gain - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50005099 chr3:50005100 nonsynonymous SNV 0.846 0 22 hm5C_associated_SNPs_111535 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:50005047-50005110
64251 chr19 16631002 16631002 1 - G A HNSC 16631003 - 16630983 16631023 41 CCCGGTCCAAGTCGTACTCCCCAGGAAGAAGACGCCGGTCA CCCGGTCCAAGTCGTACTCCCTAGGAAGAAGACGCCGGTCA < 41bp 0.517805865608324 0.757124030210384 0.2906431 0.282632 prediction 0.47863632920412 Functional Gain - CHERP ENSG00000085872 CDS Human protein_coding chr19:16631003 chr19:16631002 nonsynonymous SNV 0.545 0 22 hm5C_associated_SNPs_111537 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:16630991-16631017
64251 chr16 29708699 29708699 1 + C A LIHC 29708698 + 29708678 29708718 41 TTTCTCCCTCAAGCTGTTTGCCAAAGAGGTGGCTCCAGTGC TTTCTCCCTCAAGCTGTTTGCAAAAGAGGTGGCTCCAGTGC < 41bp 0.551622770937594 0.790920649288492 0.13835025 0.23224032 prediction 0.478595756701796 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29708698 chr16:29708699 synonymous SNV . 0 22 hm5C_associated_SNPs_111546 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29708699-29708721
64251 chr4 2696768 2696768 1 + A G COAD 2696765 + 2696745 2696785 41 TGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCT TGCAGATGAGGACAGCTGCTCTGGGCACAGCTCCAGCACCT < 41bp 0.5179479004331 0.757235022517156 0.034650415 0.27988744 prediction 0.47857424416811 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2696765 chr4:2696768 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_111550 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:2696748-2696786
64251 chr17 73221452 73221452 1 + A G GBM 73221449 + 73221429 73221469 41 TCCCTTAGCCCGGGAACACCCAGACACTGACAGAGCTGGAG TCCCTTAGCCCGGGAACACCCAGGCACTGACAGAGCTGGAG < 41bp 0.510359399748147 0.749644054452533 0.47279426 0.8975477 prediction 0.478569309408771 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73221449 chr17:73221452 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_111552 0 0 10 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:73221420-73221460
64251 chr19 46178071 46178071 1 + C A rs1800436 46178067 + 46178047 46178087 41 CCTACCTTGGGGACCAGGCCCTTGCGCTGTGGAACCAGGTG CCTACCTTGGGGACCAGGCCCTTGAGCTGTGGAACCAGGTG < 41bp 0.3191325775827 0.73927435790599 0.15863281 0.27175832 prediction 0.47854871581198 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46178067 chr19:46178071 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_111555 0 0 1 RBM15 POSTAR2 ENCODE chr19:46178065-46178111
64251 chr19 37618814 37618814 1 + T G BRCA 37618811 + 37618791 37618831 41 ATTCATACCGGTGAGAAACCCTATGAATGTAAGGAATGTGG ATTCATACCGGTGAGAAACCCTAGGAATGTAAGGAATGTGG < 41bp 0.34879607073544 0.739245837967076 0.043231606 0.09608781 prediction 0.478491675934152 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618811 chr19:37618814 stopgain 0.919 0 24 hm5C_associated_SNPs_111568 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37618813-37618873
64251 chr10 115451827 115451827 1 + C A UCEC 115451826 + 115451806 115451846 41 ATTTGTGCTTCTTATGTTACCCAGGTGAGGTACTCTGGTGT ATTTGTGCTTCTTATGTTACCAAGGTGAGGTACTCTGGTGT < 41bp 0.535543440679986 0.774787447384845 0.68518156 0.8969434 prediction 0.478488013409717 Functional Gain - CASP7 ENSG00000165806 CDS Human protein_coding chr10:115451826 chr10:115451827 nonsynonymous SNV 0.115 0 22 hm5C_associated_SNPs_111569 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:115451808-115451846
64251 chr22 25007132 25007132 1 + A G rs4049897 25007129 + 25007109 25007149 41 GGCCTCTGTCTCTGGCTGCCCTCAGCCTCCAAGGAACCTGA GGCCTCTGTCTCTGGCTGCCCTCGGCCTCCAAGGAACCTGA < 41bp 0.517850094589081 0.757081313010968 0.06992823 0.3107515 prediction 0.478462436843774 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25007129 chr22:25007132 synonymous SNV . 0 24 hm5C_associated_SNPs_111576 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:25007108-25007145
64251 chr1 214803928 214803928 1 + C A BRCA 214803927 + 214803907 214803947 41 ACACTGGACCAGGAGTGCATCCAGATGAAGGCCAGACTCAC ACACTGGACCAGGAGTGCATCAAGATGAAGGCCAGACTCAC < 41bp 0.489095891496386 0.739220881425885 0.91503143 0.88415086 prediction 0.47844176285177 Functional Gain - CENPF ENSG00000117724 CDS Human protein_coding chr1:214803927 chr1:214803928 nonsynonymous SNV 0.057 2 22 hm5C_associated_SNPs_111578 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr1:214803879-214803930
64251 chr1 110560140 110560140 1 + T A LIHC 110560136 + 110560116 110560156 41 GGTAGGCAAGGGCTGCTGTGCTGCTCTCAAAGCTCTTGGAG GGTAGGCAAGGGCTGCTGTGCTGCACTCAAAGCTCTTGGAG < 41bp 0.39582755936736 0.73921740715026 0.07427266 0.068041086 prediction 0.478434814300519 Functional Gain - AHCYL1 ENSG00000168710 CDS Human protein_coding chr1:110560136 chr1:110560140 synonymous SNV . 0 25 hm5C_associated_SNPs_111581 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:110560134-110560168
64251 chr19 41825583 41825583 1 + C A STAD 41825582 + 41825562 41825602 41 GAGGAGCTCAGTGCCCGCACCCCAACCCACCAGCCCCCCAA GAGGAGCTCAGTGCCCGCACCACAACCCACCAGCCCCCCAA < 41bp 0.53943620121207 0.778653465929467 0.12378496 0.18775189 prediction 0.478434529434793 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41825582 chr19:41825583 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_111582 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41825567-41825594
64251 chr5 8460370 8460370 1 + C A rs562171212 8460369 + 8460349 8460389 41 TCCTGTGCCTGTGACCCTTCCCAAACTGCCCTGTTGCTTGC TCCTGTGCCTGTGACCCTTCCAAAACTGCCCTGTTGCTTGC < 41bp 0.533015566366494 0.77222498699365 0.036496907 0.12647176 prediction 0.478418841254313 Functional Gain - MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8460369 chr5:8460370 . . 0 22 hm5C_associated_SNPs_111588 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:8460342-8460370
64251 chr9 124521255 124521255 1 + C A rs114266755 124521251 + 124521231 124521271 41 GATAAGTGGATGGAGAACCTCCGGCGAGCGGTGCATCCCAA GATAAGTGGATGGAGAACCTCCGGAGAGCGGTGCATCCCAA < 41bp 0.324495010178621 0.73919957633028 0.8823794 0.8346809 prediction 0.47839915266056 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124521251 chr9:124521255 synonymous SNV . 0 25 hm5C_associated_SNPs_111590 0 0 4 BUD13 POSTAR2 ENCODE chr9:124521198-124521277
64251 chr2 20867314 20867314 1 + C A LUAD 20867310 + 20867290 20867330 41 GAGCCTGGCCGGGAGGGCTCCGGCCGGGGCAGCCGCTGTCT GAGCCTGGCCGGGAGGGCTCCGGCAGGGGCAGCCGCTGTCT < 41bp 0.676264787484815 0.915458425768249 0.8914381 0.89821774 prediction 0.478387276566868 Functional Gain - GDF7 ENSG00000143869 CDS Human protein_coding chr2:20867310 chr2:20867314 synonymous SNV . 0 25 hm5C_associated_SNPs_111591 0 0 3 DDX3X POSTAR2 ENCODE chr2:20867277-20867323
64251 chr3 49569681 49569681 1 + C T UCEC 49569680 + 49569660 49569700 41 ACACGAGTATTTCATGCATGCCACAGACAAGGGGGGCCTGT ACACGAGTATTTCATGCATGCTACAGACAAGGGGGGCCTGT < 41bp 0.503010347482555 0.742202405243095 0.0691306 0.18435118 prediction 0.47838411552108 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569680 chr3:49569681 synonymous SNV . 0 22 hm5C_associated_SNPs_111592 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:49569666-49569711
64251 chr20 34287582 34287582 1 + C G OV 34287578 + 34287558 34287598 41 CCGGTGGCCGTGGGTCCCTACGGACAGTCCCAGCCAAGCTG CCGGTGGCCGTGGGTCCCTACGGAGAGTCCCAGCCAAGCTG < 41bp 0.602968818899943 0.842159376733055 0.22365797 0.8873677 prediction 0.478381115666225 Functional Gain - ROMO1 ENSG00000125995 CDS Human protein_coding chr20:34287578 chr20:34287582 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_111593 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819210 chr20:34287540-34287600
64251 chr3 52239990 52239990 1 + C A PRAD 52239986 + 52239966 52240006 41 TGCCGCACTCTTGTTTTCCTCGTGCTTTGTGGCCAATGACT TGCCGCACTCTTGTTTTCCTCGTGATTTGTGGCCAATGACT < 41bp 0.322504193737543 0.739173416962195 0.11363849 0.16217268 prediction 0.478346833924391 Functional Gain - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52239986 chr3:52239990 stopgain 0.990 1 25 hm5C_associated_SNPs_111602 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr3:52239934-52240003
64251 chr4 1206064 1206064 1 - G C GBM 1206065 - 1206045 1206085 41 TCCTGGCCAAACCGTCAAGCCCGAGGCGGATAGAGACCACG TCCTGGCCAAACCGTCAAGCCGGAGGCGGATAGAGACCACG < 41bp 0.429770424689822 0.73916377717168 0.11777112 0.41296846 prediction 0.478327554343361 Functional Gain - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206065 chr4:1206064 synonymous SNV . 0 22 hm5C_associated_SNPs_111606 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:1206030-1206095
64251 chr3 113673215 113673215 1 + T A SKCM 113673211 + 113673191 113673231 41 CAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGTGTG CAGCCCGGGCATGGCACTGCCGGAAATGTGGCATCTGTGTG < 41bp 0.434728337905988 0.739162768342437 0.8203193 0.739287 prediction 0.478325536684873 Functional Gain - ZDHHC23 ENSG00000184307 CDS Human protein_coding chr3:113673211 chr3:113673215 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_111609 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:113673188-113673231
64251 chr8 23106783 23106783 1 + C T SKCM 23106782 + 23106762 23106802 41 TGTAGACAGCAGCTGGATCTCCTGGGGGGTTGGGGTCTTCC TGTAGACAGCAGCTGGATCTCTTGGGGGGTTGGGGTCTTCC < 41bp 0.489064511546216 0.739130208991243 0.90186286 0.13004428 prediction 0.478260417982486 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23106782 chr8:23106783 synonymous SNV . 0 22 hm5C_associated_SNPs_111615 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:23106766-23106796
64251 chr1 1565702 1565702 1 + C G rs527303383 1565698 + 1565678 1565718 41 CTGAGGTGGCGAGCGCCGCCCCCGCCCCCGGCCCGCCGCGC CTGAGGTGGCGAGCGCCGCCCCCGGCCCCGGCCCGCCGCGC < 41bp 0.549556742626094 0.788677554947006 0.24251848 0.5940047 prediction 0.478241624641824 Functional Gain - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1565698 chr1:1565702 nonsynonymous SNV 0.108 0 25 hm5C_associated_SNPs_111618 0 0 4 BUD13 POSTAR2 ENCODE chr1:1565669-1565720
64251 chr3 50103767 50103767 1 + C T LUAD 50103766 + 50103746 50103786 41 AGAGGAGGAACAGACCCCTCCCCCACAGCCCCGCACAGCAC AGAGGAGGAACAGACCCCTCCTCCACAGCCCCGCACAGCAC < 41bp 0.4611599002996 0.739117049407625 0.056889743 0.9540434 prediction 0.47823409881525 Functional Gain - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50103766 chr3:50103767 synonymous SNV . 0 22 hm5C_associated_SNPs_111620 0 0 7 BUD13 POSTAR2 ENCODE chr3:50103733-50103798
64251 chr1 153615717 153615717 1 + C A LUAD 153615716 + 153615696 153615736 41 CTCTAAGGTCAAAACCTGCTCCGAGGTGGACGAGCCGTAGC CTCTAAGGTCAAAACCTGCTCAGAGGTGGACGAGCCGTAGC < 41bp 0.536624100396433 0.775740741290313 0.2716987 0.90932506 prediction 0.47823328178776 Functional Gain - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153615716 chr1:153615717 synonymous SNV . 0 22 hm5C_associated_SNPs_111621 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917662 chr1:153615700-153615720
64251 chr4 113571723 113571723 1 + C A COAD 113571719 + 113571699 113571739 41 CATTAGCACAGAGCCTCTACCTGGCAGGAAACAAGTCCGGG CATTAGCACAGAGCCTCTACCTGGAAGGAAACAAGTCCGGG < 41bp 0.692209157153782 0.931313482718892 0.059709072 0.105268866 prediction 0.47820865113022 Functional Gain - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113571719 chr4:113571723 synonymous SNV . 0 25 hm5C_associated_SNPs_111624 0 0 2 GRWD1 POSTAR2 ENCODE chr4:113571662-113571729
64251 chr19 45682876 45682876 1 + C G rs75792246 45682872 + 45682852 45682892 41 CCGGCGCCCGCCCCCGCGCGCTCGCTCCTGCAACTTCGGCT CCGGCGCCCGCCCCCGCGCGCTCGGTCCTGCAACTTCGGCT < 41bp 0.588419876315147 0.827522224890624 0.32898468 0.7980431 prediction 0.478204697150955 Functional Gain - BLOC1S3 ENSG00000189114 CDS Human protein_coding chr19:45682872 chr19:45682876 nonsynonymous SNV 0.638 4 25 hm5C_associated_SNPs_111625 1 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:45682861-45682888
64251 chr1 42922545 42922545 1 + C A rs7524895 42922544 + 42922524 42922564 41 CCCACCCCAGACTTGGCTGTCCGCTCTGCGGCCTTCGGGCC CCCACCCCAGACTTGGCTGTCAGCTCTGCGGCCTTCGGGCC < 41bp 0.527451834478321 0.766550040180372 0.28913355 0.9013171 prediction 0.478196411404102 Functional Gain - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922544 chr1:42922545 synonymous SNV . 0 22 hm5C_associated_SNPs_111627 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:42922520-42922551
64251 chr12 113624560 113624560 1 + C T CESC 113624559 + 113624539 113624579 41 GACCACAGGCAGCATGAAGACCCCCGTGGAGCTGGCCGTCA GACCACAGGCAGCATGAAGACTCCCGTGGAGCTGGCCGTCA < 41bp 0.503868347454471 0.742963112934753 0.29326046 0.24627423 prediction 0.478189530960563 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113624559 chr12:113624560 synonymous SNV . 0 22 hm5C_associated_SNPs_111629 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:113624550-113624572
64251 chr2 10863031 10863031 1 + T G SKCM 10863028 + 10863008 10863048 41 CGATAAGGAAAATTTGCAAGCTCTGGAGAGGATGAATACTG CGATAAGGAAAATTTGCAAGCTCGGGAGAGGATGAATACTG < 41bp 0.352885749277227 0.73908240311075 0.04661855 0.072055906 prediction 0.4781648062215 Functional Gain - ATP6V1C2 ENSG00000143882 CDS Human protein_coding chr2:10863028 chr2:10863031 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_111631 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:10863011-10863042
64251 chr16 67201791 67201791 1 + C T CESC 67201790 + 67201770 67201810 41 AGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAATGCCC AGGGAAAGGGAGCTTCAGCCCTGAGGGGCCCAGGAATGCCC < 41bp 0.519217282181906 0.758295431720325 0.28800324 0.16350222 prediction 0.478156299076839 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67201790 chr16:67201791 stopgain . 0 22 hm5C_associated_SNPs_111632 0 0 1 ZNF622 POSTAR2 ENCODE chr16:67201772-67201799
64251 chr19 52091483 52091483 1 + T C UCEC 52091481 + 52091461 52091501 41 AGAAATCAGAGTTGATTACCCATCAAAGAACTCACATGGGA AGAAATCAGAGTTGATTACCCACCAAAGAACTCACATGGGA < 41bp 0.465451158402081 0.739073310097256 0.1165469 0.08391857 prediction 0.478146620194511 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52091481 chr19:52091483 synonymous SNV . 0 23 hm5C_associated_SNPs_111635 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:52091462-52091488
64251 chr19 6743800 6743800 1 + C T UCEC 6743799 + 6743779 6743819 41 GCTCAACTGCAGCGCTTCAACCGAGACCAAGCCCACTTCTA GCTCAACTGCAGCGCTTCAACTGAGACCAAGCCCACTTCTA < 41bp 0.494101035232395 0.739066801516979 0.26253924 0.11554822 prediction 0.478133603033958 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6743799 chr19:6743800 stopgain 0.997 1 22 hm5C_associated_SNPs_111636 0 0 1 GRWD1 POSTAR2 ENCODE chr19:6743799-6743815
64251 chr20 33508432 33508432 1 + T A STAD 33508428 + 33508408 33508448 41 TTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGG TTCCATGCAGAGGATGTGTTCTGGAGCACGGCAGACATTGG < 41bp 0.639994142289002 0.879038176719692 0.26357055 0.21784377 prediction 0.47808806886138 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33508428 chr20:33508432 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_111642 0 0 2 DDX24 POSTAR2 ENCODE chr20:33508425-33508468
64251 chr17 7490569 7490569 1 + C T UCEC 7490568 + 7490548 7490588 41 CTGTTTGGGGGCTCCCTGGCCCGAATCTTCACTTCCATTCA CTGTTTGGGGGCTCCCTGGCCTGAATCTTCACTTCCATTCA < 41bp 0.529610463779941 0.768653360278525 0.07609102 0.10781485 prediction 0.478085792997168 Functional Gain - MPDU1 ENSG00000129255 CDS Human protein_coding chr17:7490568 chr17:7490569 stopgain 0.998 3 22 hm5C_associated_SNPs_111643 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:7490550-7490582
64251 chr15 72873126 72873126 1 + C A UCEC 72873125 + 72873105 72873145 41 TACTGTAATCGCTATATGAACCACATGCAGAGCCTGCGCTT TACTGTAATCGCTATATGAACAACATGCAGAGCCTGCGCTT < 41bp 0.531644595365605 0.770662223322746 0.0401963 0.059164613 prediction 0.478035255914282 Functional Gain - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72873125 chr15:72873126 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111649 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:72873090-72873151
64251 chr3 40576933 40576933 1 + C G rs534890949 40576932 + 40576912 40576952 41 GGATGCCACATAGGCAGAAGCCAGGAAAAATGACCAACCAC GGATGCCACATAGGCAGAAGCGAGGAAAAATGACCAACCAC < 41bp 0.585671350822268 0.824680567715503 0.34353507 0.8811762 prediction 0.478018433786469 Functional Gain - ZNF621 ENSG00000172888 UTR3 Human protein_coding chr3:40576932 chr3:40576933 . . 0 22 hm5C_associated_SNPs_111652 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:40576932-40576933
64251 chr7 128845088 128845088 1 + A G rs56334250 128845085 + 128845065 128845105 41 TTCAACAGTTCAGGCCAGTGCGAAGTGCCCTTGGTTCGGAC TTCAACAGTTCAGGCCAGTGCGAGGTGCCCTTGGTTCGGAC < 41bp 0.49225157563286 0.739007577968293 0.32520187 0.84921515 prediction 0.478015155936586 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128845085 chr7:128845088 synonymous SNV . 0 24 hm5C_associated_SNPs_111653 0 0 1 PPIG POSTAR2 ENCODE chr7:128845075-128845139
64251 chr11 126276430 126276430 1 + C T KIRC 126276429 + 126276409 126276449 41 ATGGTGTGGTATTCCATCTCCCGGGAAGACAGGTACATCGA ATGGTGTGGTATTCCATCTCCTGGGAAGACAGGTACATCGA < 41bp 0.521442253872105 0.760444790584371 0.74742734 0.5134596 prediction 0.478005073424532 Functional Gain - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126276429 chr11:126276430 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_111654 0 0 2 DDX3X POSTAR2 ENCODE chr11:126276380-126276435
64251 chr12 32369208 32369208 1 + C T HNSC 32369207 + 32369187 32369227 41 GGGCAGTCCTTCTCCATCCACCGGAAGGTTGCTGAAGATGG GGGCAGTCCTTCTCCATCCACTGGAAGGTTGCTGAAGATGG < 41bp 0.540871312979682 0.77985835812504 0.12342882 0.13120219 prediction 0.477974090290715 Functional Gain - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32369207 chr12:32369208 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111659 0 0 1 UCHL5 POSTAR2 ENCODE chr12:32369195-32369400
64251 chr10 103919250 103919250 1 + C T OV 103919249 + 103919229 103919269 41 AAAGCAGCTACCACCCCTACCCGGAAGAGTTCTAGCAGTGA AAAGCAGCTACCACCCCTACCTGGAAGAGTTCTAGCAGTGA < 41bp 0.546436526552007 0.785410524981783 0.25741136 0.07955378 prediction 0.477947996859553 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919249 chr10:103919250 nonsynonymous SNV 0.261 2 22 hm5C_associated_SNPs_111660 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr10:103919228-103919255
64251 chrX 51638272 51638272 1 + C T COAD 51638271 + 51638251 51638291 41 AGTCCCCAGAGTTCACAGCCCCCAACTGCCAATGAGATGGC AGTCCCCAGAGTTCACAGCCCTCAACTGCCAATGAGATGGC < 41bp 0.464998728241086 0.738964351535734 0.02072385 0.07785565 prediction 0.477928703071469 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51638271 chrX:51638272 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_111663 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chrX:51638260-51638280
64251 chr1 116932304 116932304 1 + C T STAD 116932303 + 116932283 116932323 41 GTATCATCGTAGCCAATGTGCCGGAAGGTTTGCTGGCCACT GTATCATCGTAGCCAATGTGCTGGAAGGTTTGCTGGCCACT < 41bp 0.528769622088808 0.767727552532529 0.37535554 0.3149608 prediction 0.477915860887442 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116932303 chr1:116932304 nonsynonymous SNV 0.882 5 22 hm5C_associated_SNPs_111667 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:116932289-116932326
64251 chr19 42794462 42794462 1 + C A BRCA 42794461 + 42794441 42794481 41 CCCCCCACTGGACCCTGAGCCCCCAGGGCCCCCGGATCCTC CCCCCCACTGGACCCTGAGCCACCAGGGCCCCCGGATCCTC < 41bp 0.47970602241759 0.738947761301399 0.8748832 0.79915905 prediction 0.477895522602799 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42794461 chr19:42794462 synonymous SNV . 0 22 hm5C_associated_SNPs_111670 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:42794437-42794491
64251 chr5 10265407 10265407 1 + C G rs560688668 10265403 + 10265383 10265423 41 TAGGTTGCTCACAGCCTAACCTGGCGTGTTGTTTAGGGCTG TAGGTTGCTCACAGCCTAACCTGGGGTGTTGTTTAGGGCTG < 41bp 0.608988783516741 0.847927147231382 0.84677756 0.90388644 prediction 0.477876727429283 Functional Gain - CCT5 ENSG00000271980 ncRNA_exonic Human antisense chr5:10265403 chr5:10265407 . . 0 25 hm5C_associated_SNPs_111674 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:10265371-10265413
64251 chr12 109948241 109948241 1 + C G BRCA 109948240 + 109948220 109948260 41 GACTGCCGGCGGCGCTTCACCCCCGAGGACCACTGGCTGCG GACTGCCGGCGGCGCTTCACCGCCGAGGACCACTGGCTGCG < 41bp 0.626752874660777 0.865677907676534 0.17542529 0.40826458 prediction 0.477850066031515 Functional Gain - UBE3B ENSG00000151148 CDS Human protein_coding chr12:109948240 chr12:109948241 nonsynonymous SNV 0.254 3 22 hm5C_associated_SNPs_111676 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:109948233-109948260
64251 chr1 116577822 116577822 1 + T C SKCM 116577820 + 116577800 116577840 41 AATTGCAGGTTTGTGTGCAGCTTGGTGTATTATGGCCTAAC AATTGCAGGTTTGTGTGCAGCTCGGTGTATTATGGCCTAAC < 41bp 0.461157550676769 0.738921607016048 0.27838075 0.3355608 prediction 0.477843214032096 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116577820 chr1:116577822 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_111677 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:116577808-116577838
64251 chr7 102036929 102036929 1 + C T SKCM 102036928 + 102036908 102036948 41 AGCCGCAGACGCTCGTCATCCCCAAGAATGCGGCGGAGGAG AGCCGCAGACGCTCGTCATCCTCAAGAATGCGGCGGAGGAG < 41bp 0.485199128349217 0.738916052488861 0.027673095 0.06284568 prediction 0.477832104977722 Functional Gain - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102036928 chr7:102036929 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111680 0 0 1 YBX3 POSTAR2 ENCODE chr7:102036922-102036954
64251 chr20 43547656 43547656 1 + C G LUSC 43547652 + 43547632 43547672 41 AACCTCCCGGTGGATGTGGACGAGCAAGGCCTGCAGGACCT AACCTCCCGGTGGATGTGGACGAGGAAGGCCTGCAGGACCT < 41bp 0.609497197253431 0.84839649899497 0.5232564 0.86486363 prediction 0.477798603483077 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547652 chr20:43547656 nonsynonymous SNV 0.637 1 25 hm5C_associated_SNPs_111685 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:43547628-43547656
64251 chr3 152880682 152880682 1 + T C COAD 152880680 + 152880660 152880700 41 GGCACCGAGCAGTTCGCGTCCATGCGGGACCTGTACATCAA GGCACCGAGCAGTTCGCGTCCACGCGGGACCTGTACATCAA < 41bp 0.490573196816229 0.738898831357954 0.3243267 0.36330923 prediction 0.477797662715908 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880680 chr3:152880682 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_111686 0 0 1 LIN28B POSTAR2 ENCODE chr3:152880633-152880689
64251 chr12 58150727 58150727 1 + C A UCEC 58150726 + 58150706 58150746 41 CTCCAGGGGGAGCTCTTAAGCCCCTGCCGCTGCGACGGCTC CTCCAGGGGGAGCTCTTAAGCACCTGCCGCTGCGACGGCTC < 41bp 0.544994422524921 0.783892070635742 0.12739184 0.1422486 prediction 0.477795296221642 Functional Gain - MARCH9 ENSG00000139266 CDS Human protein_coding chr12:58150726 chr12:58150727 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111687 0 0 2 BUD13 POSTAR2 ENCODE chr12:58150690-58150756
64251 chr14 55243152 55243152 1 + C T rs1951437 55243151 + 55243131 55243171 41 GAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGC GAACCTGTGGTTTGCCAACCCTGGGGGCAGCAATAGCATGC < 41bp 0.515181135495833 0.7540751923786 0.91887546 0.41101974 prediction 0.477788113765533 Functional Gain - SAMD4A ENSG00000020577 CDS Human protein_coding chr14:55243151 chr14:55243152 synonymous SNV . 0 22 hm5C_associated_SNPs_111688 0 0 2 BUD13 POSTAR2 ENCODE chr14:55243092-55243166
64251 chr3 127327252 127327252 1 + C T UCEC 127327251 + 127327231 127327271 41 TATCAGAACTACCAGCGTATCCGAATCCAGGAGAGTCCAGG TATCAGAACTACCAGCGTATCTGAATCCAGGAGAGTCCAGG < 41bp 0.482810079644655 0.738891116955358 0.41254097 0.45466173 prediction 0.477782233910715 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127327251 chr3:127327252 stopgain 0.997 0 22 hm5C_associated_SNPs_111689 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr3:127327240-127327260
64251 chr7 143085653 143085653 1 + C T COAD 143085652 + 143085632 143085672 41 CGCGCTCTAGGGCAGCTGTTCCACATCGCCTGCTTCACCTG CGCGCTCTAGGGCAGCTGTTCTACATCGCCTGCTTCACCTG < 41bp 0.475641827267296 0.738879822158237 0.24944857 0.8755176 prediction 0.477759644316474 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143085652 chr7:143085653 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_111694 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr7:143085635-143085659
64251 chr5 154183836 154183836 1 + C T UCEC 154183835 + 154183815 154183855 41 GTGGGCTGGGTGATGGATTCCCGTGAGCACAGGCCCCGTAC GTGGGCTGGGTGATGGATTCCTGTGAGCACAGGCCCCGTAC < 41bp 0.491281183017248 0.738863851400788 0.3023276 0.109241515 prediction 0.477727702801576 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154183835 chr5:154183836 nonsynonymous SNV 0.896 4 22 hm5C_associated_SNPs_111702 0 0 24 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:154183783-154183836
64251 chr3 186505357 186505357 1 + T A OV 186505353 + 186505333 186505373 41 GGTCAGGGTCAAGTCGTGTTCTGATCACTACTGACTTGTTG GGTCAGGGTCAAGTCGTGTTCTGAACACTACTGACTTGTTG < 41bp 0.426824162479651 0.738850271245941 0.124138 0.14048806 prediction 0.477700542491882 Functional Gain - EIF4A2 ENSG00000156976 CDS Human protein_coding chr3:186505353 chr3:186505357 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_111704 0 0 22 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:186505304-186505373
64251 chr13 114292142 114292142 1 + A G STAD 114292139 + 114292119 114292159 41 CTTTCCCTTTTCAGAAATGGCTCAGGGAACTGTTGGAGGCG CTTTCCCTTTTCAGAAATGGCTCGGGGAACTGTTGGAGGCG < 41bp 0.496505662816936 0.738847129863074 0.13035989 0.24702284 prediction 0.477694259726149 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114292139 chr13:114292142 nonsynonymous SNV 0.983 0 24 hm5C_associated_SNPs_111705 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:114292132-114292177
64251 chr2 241569966 241569966 1 + C A COAD 241569965 + 241569945 241569985 41 GAAGGTGGTGACTGCCCTGGCCCAGAGGCCACCCACCGACG GAAGGTGGTGACTGCCCTGGCACAGAGGCCACCCACCGACG < 41bp 0.537543329656867 0.776377868195373 0.039480835 0.07171321 prediction 0.477669077077014 Functional Gain - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569965 chr2:241569966 synonymous SNV . 0 22 hm5C_associated_SNPs_111708 0 0 1 RPS3 POSTAR2 ENCODE chr2:241569941-241570000
64251 chr1 33238690 33238690 1 + C G rs143289778 33238689 + 33238669 33238709 41 TCCTGCGCTCATGCCTTTTCCCGAATGGGTTCACCTCTGGC TCCTGCGCTCATGCCTTTTCCGGAATGGGTTCACCTCTGGC < 41bp 0.42098012050264 0.738833709719963 0.5322629 0.8908524 prediction 0.477667419439927 Functional Gain - KIAA1522 ENSG00000162522 UTR3 Human protein_coding chr1:33238689 chr1:33238690 . . 0 22 hm5C_associated_SNPs_111709 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1486177 chr1:33238680-33238700
64251 chr1 43166637 43166637 1 + C T SKCM 43166636 + 43166616 43166656 41 AGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCT AGACAAAAGCAGCCGATCCACTAGCTGAGAATTCGTCCGCT < 41bp 0.513355548114299 0.75218488586273 0.8458581 0.35802454 prediction 0.477658675496862 Functional Gain - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43166636 chr1:43166637 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111710 0 0 25 SRSF1 POSTAR2 GSE83923,GSM2221666 chr1:43166620-43166640
64251 chr8 23112844 23112844 1 + C A STAD 23112840 + 23112820 23112860 41 GTGGCCCTGTCAGAGCTCAGCACCCTCTGTGCTAACTCCTG GTGGCCCTGTCAGAGCTCAGCACCATCTGTGCTAACTCCTG < 41bp 0.300251826130439 0.73881607928144 0.13576391 0.2658199 prediction 0.477632158562879 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112840 chr8:23112844 nonsynonymous SNV 0.575 1 25 hm5C_associated_SNPs_111713 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:23112835-23112860
64251 chr5 176081963 176081963 1 + T C UCEC 176081961 + 176081941 176081981 41 ATCTACTTCAACTGCACTGACTTGAACCCCAGCCGGGAGCG ATCTACTTCAACTGCACTGACTCGAACCCCAGCCGGGAGCG < 41bp 0.568077206521321 0.806892494649593 0.20540923 0.455086 prediction 0.477630576256543 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176081961 chr5:176081963 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_111715 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:176081911-176081971
64251 chr9 130980992 130980992 1 + C T ESCA 130980991 + 130980971 130981011 41 TCGCCGGTGCCTATCAACCTCCGCGTCTACTCGCCGCACGG TCGCCGGTGCCTATCAACCTCTGCGTCTACTCGCCGCACGG < 41bp 0.487940965088539 0.738810647155013 0.3229645 0.17207497 prediction 0.477621294310026 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130980991 chr9:130980992 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_111717 0 0 2 DDX24 POSTAR2 ENCODE chr9:130980990-130981008
64251 chr16 84691250 84691250 1 + C A rs138867111 84691246 + 84691226 84691266 41 GCGCTACCACAACAACCTGGCGGCCCAGCCCGTCATGCAGA GCGCTACCACAACAACCTGGCGGCACAGCCCGTCATGCAGA < 41bp 0.326698734800895 0.738810403572198 0.18403387 0.3497589 prediction 0.477620807144396 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84691246 chr16:84691250 synonymous SNV . 0 25 hm5C_associated_SNPs_111718 0 0 1 RBM15 POSTAR2 ENCODE chr16:84691211-84691255
64251 chr4 71889351 71889351 1 + T C UCEC 71889349 + 71889329 71889369 41 GGACAATTTATCAAGACTGGCATGACTGGATGAATAACCAA GGACAATTTATCAAGACTGGCACGACTGGATGAATAACCAA < 41bp 0.452685609541484 0.738809329196243 0.015292019 0.0077394545 prediction 0.477618658392486 Functional Gain - DCK ENSG00000156136 CDS Human protein_coding chr4:71889349 chr4:71889351 synonymous SNV . 0 23 hm5C_associated_SNPs_111720 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr4:71889285-71889399
64251 chr12 123335396 123335396 1 + C T rs61739358 123335395 + 123335375 123335415 41 TCCACAGCATCCCCAGTTTCCCGCGGGCCTGGAGGTGACAG TCCACAGCATCCCCAGTTTCCTGCGGGCCTGGAGGTGACAG < 41bp 0.50975375186936 0.748558616957093 0.84302783 0.1931518 prediction 0.477609730175466 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123335395 chr12:123335396 synonymous SNV . 0 22 hm5C_associated_SNPs_111723 0 0 8 BUD13 POSTAR2 ENCODE chr12:123335319-123335413
64251 chr19 55494709 55494709 1 + C T SKCM 55494708 + 55494688 55494728 41 GAGTAGAAAGACTCAGGAACCCCGACCTGATCCAAGCAGGC GAGTAGAAAGACTCAGGAACCTCGACCTGATCCAAGCAGGC < 41bp 0.533856376207861 0.772659247121246 0.04635939 0.12745687 prediction 0.47760574182677 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494708 chr19:55494709 nonsynonymous SNV 0.021 3 22 hm5C_associated_SNPs_111724 0 0 1 UCHL5 POSTAR2 ENCODE chr19:55494658-55494739
64251 chr7 101957803 101957803 1 + C T LUAD 101957802 + 101957782 101957822 41 CACGGCCTCTTCGTGATCCGCCAAAGTGAGACTCGGCCTGG CACGGCCTCTTCGTGATCCGCTAAAGTGAGACTCGGCCTGG < 41bp 0.537447759153124 0.776249386519573 0.87252045 0.7015713 prediction 0.477603254732897 Functional Gain - SH2B2 ENSG00000160999 CDS Human protein_coding chr7:101957802 chr7:101957803 stopgain 0.998 1 22 hm5C_associated_SNPs_111725 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr7:101957800-101957820
64251 chr2 219294122 219294122 1 + C T SKCM 219294121 + 219294101 219294141 41 AAGCTGATGGAGGTGATGAACCACGTGCTGGGCAAGCGCAG AAGCTGATGGAGGTGATGAACTACGTGCTGGGCAAGCGCAG < 41bp 0.488337207588928 0.73879890278528 0.2831543 0.27313393 prediction 0.477597805570561 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219294121 chr2:219294122 nonsynonymous SNV 0.938 1 22 hm5C_associated_SNPs_111726 0 0 5 GRWD1 POSTAR2 ENCODE chr2:219294065-219294187
64251 chr6 27806814 27806814 1 + C A ESCA 27806813 + 27806793 27806833 41 CGTCACCAAGTACACCAGTTCCAAGTGAGCCCGCCCACCGC CGTCACCAAGTACACCAGTTCAAAGTGAGCCCGCCCACCGC < 41bp 0.520223521440272 0.759021618173304 0.47267154 0.85239565 prediction 0.477596193466064 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806813 chr6:27806814 synonymous SNV . 0 22 hm5C_associated_SNPs_111727 0 0 29 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:27806780-27806820
64251 chr16 81744442 81744442 1 + C G rs75232767 81744441 + 81744421 81744461 41 GTAAAAGAGCTGTTCCCCACCCCCAGGGAGCTCCTGTCCCT GTAAAAGAGCTGTTCCCCACCGCCAGGGAGCTCCTGTCCCT < 41bp 0.60582977136866 0.844599733365726 0.08758569 0.28674507 prediction 0.477539923994131 Functional Gain - CMIP ENSG00000153815 UTR3 Human protein_coding chr16:81744441 chr16:81744442 . . 0 22 hm5C_associated_SNPs_111733 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr16:81744432-81744456
64251 chr4 71554947 71554947 1 + T G COAD 71554945 + 71554925 71554965 41 AGAGGATGATTTTGGTGTCGCCTGGGTTGAGGCCTTTGCAA AGAGGATGATTTTGGTGTCGCCGGGGTTGAGGCCTTTGCAA < 41bp 0.657473312968111 0.896239914102223 0.81889904 0.9122693 prediction 0.477533202268224 Functional Gain - UTP3 ENSG00000132467 CDS Human protein_coding chr4:71554945 chr4:71554947 nonsynonymous SNV 0.795 1 23 hm5C_associated_SNPs_111734 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:71554924-71554959
64251 chr4 123748086 123748086 1 + C G rs1449683 123748082 + 123748062 123748102 41 GCGGCGTCCGCGGAGACACCCATCCGTGAACCCCAGGTCCC GCGGCGTCCGCGGAGACACCCATCGGTGAACCCCAGGTCCC < 41bp 0.576595420800135 0.815361863494715 0.22925326 0.24742398 prediction 0.47753288538916 Functional Gain - FGF2 ENSG00000138685 CDS Human protein_coding chr4:123748082 chr4:123748086 synonymous SNV . 0 25 hm5C_associated_SNPs_111735 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr4:123748076-123748108
64251 chr12 51207805 51207805 1 + C T SKCM 51207804 + 51207784 51207824 41 TGATTAAAGTTGCCATTGCCCCAAATGGAGCCTTACAGTTG TGATTAAAGTTGCCATTGCCCTAAATGGAGCCTTACAGTTG < 41bp 0.52522937870238 0.763989947551077 0.098841965 0.08168933 prediction 0.477521137697394 Functional Gain - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51207804 chr12:51207805 stopgain 0.999 1 22 hm5C_associated_SNPs_111738 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:51207795-51207819
64251 chr19 57716786 57716786 1 + A G COAD 57716783 + 57716763 57716803 41 AGGGTGTCCTGTTCCCAAAGCTGAGCTGATCTGCCACCTAG AGGGTGTCCTGTTCCCAAAGCTGGGCTGATCTGCCACCTAG < 41bp 0.493099325434763 0.738754248194681 0.60110676 0.9320619 prediction 0.477508496389363 Functional Gain - ZNF264 ENSG00000083844 CDS Human protein_coding chr19:57716783 chr19:57716786 nonsynonymous SNV 0.008 3 24 hm5C_associated_SNPs_111740 0 0 1 BUD13 POSTAR2 ENCODE chr19:57716736-57716797
64251 chr10 104356986 104356986 1 + C T STAD 104356985 + 104356965 104357005 41 GGATGACCTGAGCCGGCCCCCCGAGGATGACGAGGACAGCC GGATGACCTGAGCCGGCCCCCTGAGGATGACGAGGACAGCC < 41bp 0.526338991279771 0.765088842248255 0.78647053 0.3213725 prediction 0.477499701936968 Functional Gain - SUFU ENSG00000107882 CDS Human protein_coding chr10:104356985 chr10:104356986 synonymous SNV . 0 22 hm5C_associated_SNPs_111743 0 0 1 PPIG POSTAR2 ENCODE chr10:104356890-104357029
64251 chr17 8171879 8171879 1 + C T SKCM 8171878 + 8171858 8171898 41 AGCTGCTGTGACCTTTCATCCCAGGGCTGGGGCTGAGCTGA AGCTGCTGTGACCTTTCATCCTAGGGCTGGGGCTGAGCTGA < 41bp 0.495676492984187 0.738749315524654 0.8742229 0.864986 prediction 0.477498631049307 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8171878 chr17:8171879 synonymous SNV . 0 22 hm5C_associated_SNPs_111744 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr17:8171852-8171904
64251 chr3 14989310 14989310 1 + C A rs564563191 14989306 + 14989286 14989326 41 GGCCCCCGGGCTCCCGCCATCCGCCGACACCGGGAGCCCGG GGCCCCCGGGCTCCCGCCATCCGCAGACACCGGGAGCCCGG < 41bp 0.653880633890936 0.892626843109632 0.19174576 0.7484086 prediction 0.477492418437391 Functional Gain - FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989306 chr3:14989310 . . 0 25 hm5C_associated_SNPs_111745 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr2 71299785 71299785 1 + A G KIRC 71299782 + 71299762 71299802 41 TTTCCCCAGGTGGAGTTGTGCTCATATCTGGAACAGGCTCC TTTCCCCAGGTGGAGTTGTGCTCGTATCTGGAACAGGCTCC < 41bp 0.501043924863613 0.73977717503045 0.23053357 0.29613137 prediction 0.477466500333674 Functional Gain - NAGK ENSG00000124357 CDS Human protein_coding chr2:71299782 chr2:71299785 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_111748 0 0 4 BUD13 POSTAR2 ENCODE chr2:71299720-71299965
64251 chr1 48699342 48699342 1 + T C UCEC 48699340 + 48699320 48699360 41 TCCACAGACGAGGTGGGCTGCGTGGACCCTGATGTCTGCCA TCCACAGACGAGGTGGGCTGCGCGGACCCTGATGTCTGCCA < 41bp 0.548591771233885 0.787320219286122 0.42346564 0.5512727 prediction 0.477456896104474 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48699340 chr1:48699342 nonsynonymous SNV 0.833 4 23 hm5C_associated_SNPs_111749 0 0 4 GRWD1 POSTAR2 ENCODE chr1:48699326-48699365
64251 chr1 89990482 89990482 1 + C G rs546365414 89990478 + 89990458 89990498 41 TCCCGCTGAGCCCGCAGCCTCCGGCAGCCGGGAAAGTGCGG TCCCGCTGAGCCCGCAGCCTCCGGGAGCCGGGAAAGTGCGG < 41bp 0.569838626902137 0.808523907068334 0.86579704 0.9076203 prediction 0.477370560332395 Functional Gain - LRRC8B ENSG00000197147 UTR5 Human protein_coding chr1:89990478 chr1:89990482 . . 0 25 hm5C_associated_SNPs_111759 0 0 6 DDX3X POSTAR2 ENCODE chr1:89990467-89990582
64251 chr22 29695287 29695287 1 + T G LUSC 29695285 + 29695265 29695305 41 ACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCCTCCCGCCA ACCAGTGTAAGGCCCCAAAGCCGGAAGGCTTCCTCCCGCCA < 41bp 0.657656626553903 0.896335934570344 0.23404565 0.91513443 prediction 0.477358616032882 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695285 chr22:29695287 synonymous SNV . 0 23 hm5C_associated_SNPs_111761 0 0 2 GRWD1 POSTAR2 ENCODE chr22:29695282-29695322
64251 chr6 37250080 37250080 1 + C T COAD 37250079 + 37250059 37250099 41 GGGGCCCCCCCAATGACTGTCCGGGAGAAAACCCGCCTAGA GGGGCCCCCCCAATGACTGTCTGGGAGAAAACCCGCCTAGA < 41bp 0.519544376698594 0.758206825764014 0.91275036 0.9069902 prediction 0.477324898130839 Functional Gain - TBC1D22B ENSG00000065491 CDS Human protein_coding chr6:37250079 chr6:37250080 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111766 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:37250041-37250098
64251 chr16 8943077 8943077 1 + C G rs186876894 8943076 + 8943056 8943096 41 GGTGAAAGCAGCCAGCTCATCCCAGTGACTCACAGGACACA GGTGAAAGCAGCCAGCTCATCGCAGTGACTCACAGGACACA < 41bp 0.527490616018416 0.766152446144921 0.19181085 0.3327337 prediction 0.477323660253011 Functional Gain - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8943076 chr16:8943077 . . 0 22 hm5C_associated_SNPs_111768 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:8943060-8943080
64251 chr3 183885712 183885712 1 + C T LUSC 183885711 + 183885691 183885731 41 GATGTGGTGGACTGGCTGTACCACAATGTGGAAGGCTTCAC GATGTGGTGGACTGGCTGTACTACAATGTGGAAGGCTTCAC < 41bp 0.562590105031555 0.801245349178799 0.07400727 0.9195281 prediction 0.477310488294487 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885711 chr3:183885712 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_111769 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:183885691-183885718
64251 chr10 11912144 11912144 1 + C G rs17851505 11912140 + 11912120 11912160 41 GGCCAACGGCTTCCCAAGTGCGCACGAGGCCCTGAAGAGCG GGCCAACGGCTTCCCAAGTGCGCAGGAGGCCCTGAAGAGCG < 41bp 0.459680857262971 0.738653159511622 0.18854913 0.18538982 prediction 0.477306319023244 Functional Gain - PROSER2 ENSG00000148426 CDS Human protein_coding chr10:11912140 chr10:11912144 nonsynonymous SNV 0.002 4 25 hm5C_associated_SNPs_111770 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:11912128-11912156
64251 chr5 137721783 137721783 1 + C T COAD 137721782 + 137721762 137721802 41 AGCATAGAGGGGAAAGATGGCCGGAGGAGGAAAAGTGCTTC AGCATAGAGGGGAAAGATGGCTGGAGGAGGAAAAGTGCTTC < 41bp 0.514892353980841 0.753545508263303 0.79813004 0.390692 prediction 0.477306308564924 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137721782 chr5:137721783 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111771 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr5:137721780-137721800
64251 chr12 7283134 7283134 1 + T A rs71445143 7283130 + 7283110 7283150 41 GGCTCCTTTCCGTCCCTGCCCTGCTGTACCCCGCTCCTTGG GGCTCCTTTCCGTCCCTGCCCTGCAGTACCCCGCTCCTTGG < 41bp 0.443718029475537 0.738629845809504 0.10490069 0.18744022 prediction 0.477259691619008 Functional Gain - CLSTN3 ENSG00000256967 ncRNA_intronic Human antisense chr12:7283130 chr12:7283134 . . 0 25 hm5C_associated_SNPs_111777 0 0 6 DDX3X POSTAR2 ENCODE chr12:7283094-7283203
64251 chr4 190873420 190873420 1 + C T rs148718668 190873419 + 190873399 190873439 41 ACTCGACAATGGTCTTTTTACCCTGGGAGCTCCACACAAAG ACTCGACAATGGTCTTTTTACTCTGGGAGCTCCACACAAAG < 41bp 0.481084193793902 0.738629076264058 0.06959811 0.05647537 prediction 0.477258152528117 Functional Gain - FRG1 ENSG00000109536 CDS Human protein_coding chr4:190873419 chr4:190873420 nonsynonymous SNV 0.919 0 22 hm5C_associated_SNPs_111779 0 0 2 MTPAP POSTAR2 ENCODE chr4:190873402-190873443
64251 chr3 195944785 195944785 1 + C T STAD 195944784 + 195944764 195944804 41 CGCCTGCTTCTCTCAGCCTCCCACAGCAGCCCAACTCCTGA CGCCTGCTTCTCTCAGCCTCCTACAGCAGCCCAACTCCTGA < 41bp 0.470424620258588 0.738623772529969 0.049115658 0.27665466 prediction 0.477247545059937 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195944784 chr3:195944785 synonymous SNV . 0 22 hm5C_associated_SNPs_111781 0 0 2 BUD13 POSTAR2 ENCODE chr3:195944663-195944786
64251 chr13 24823894 24823894 1 + C G rs7330736 24823893 + 24823873 24823913 41 GTGGGCTGCCCCAAAGGAGCCCGGAGAAGGCGCCCCATTTC GTGGGCTGCCCCAAAGGAGCCGGGAGAAGGCGCCCCATTTC < 41bp 0.583544165425462 0.822139551286584 0.4205153 0.88857394 prediction 0.477190771722243 Functional Gain - SPATA13 ENSG00000182957 CDS Human protein_coding chr13:24823893 chr13:24823894 nonsynonymous SNV 0.153 2 22 hm5C_associated_SNPs_111787 0 0 1 GRWD1 POSTAR2 ENCODE chr13:24823839-24823975
64251 chr17 74383387 74383387 1 + C A LUSC 74383383 + 74383363 74383403 41 TCATGCATCTGTTCTACGTGCGGGCGGGAGTGTCTCGTGCC TCATGCATCTGTTCTACGTGCGGGAGGGAGTGTCTCGTGCC < 41bp 0.680895454712599 0.9194882464539 0.82839286 0.9149678 prediction 0.477185583482603 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74383383 chr17:74383387 nonsynonymous SNV 0.109 3 25 hm5C_associated_SNPs_111789 0 0 2 EIF3H POSTAR2 ENCODE chr17:74383383-74383417
64251 chr13 100637337 100637337 1 + C A BLCA 100637336 + 100637316 100637356 41 TGCGACAAGTCCTACACGCACCCCAGCTCGCTGCGGAAGCA TGCGACAAGTCCTACACGCACACCAGCTCGCTGCGGAAGCA < 41bp 0.541585973051871 0.780158337649761 0.031505823 0.043532193 prediction 0.477144729195779 Functional Gain - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100637336 chr13:100637337 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111796 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:100637266-100637339
64251 chr16 778024 778024 1 + T C rs1406814 778022 + 778002 778042 41 CCGCTGTGCTGACCACCCACCATCACTGGTGAGCGCCGGCG CCGCTGTGCTGACCACCCACCACCACTGGTGAGCGCCGGCG < 41bp 0.534843279389705 0.773383401348367 0.11614272 0.111840785 prediction 0.477080243917324 Functional Gain - HAGHL ENSG00000103253 CDS Human protein_coding chr16:778022 chr16:778024 synonymous SNV . 0 23 hm5C_associated_SNPs_111807 0 0 2 DDX24 POSTAR2 ENCODE chr16:777976-778034
64251 chr18 19761461 19761461 1 + A G rs61731977 19761458 + 19761438 19761478 41 TCCTGTGCCAACTGTCACACCACAACTACCACCTTATGGCG TCCTGTGCCAACTGTCACACCACGACTACCACCTTATGGCG < 41bp 0.531948971205477 0.770481594033082 0.09495041 0.1591129 prediction 0.47706524565521 Functional Gain - GATA6 ENSG00000141448 CDS Human protein_coding chr18:19761458 chr18:19761461 synonymous SNV . 0 24 hm5C_associated_SNPs_111813 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr18:19761451-19761475
64251 chr22 44564682 44564682 1 + C G rs566335744 44564681 + 44564661 44564701 41 CAAGCTGTGTTGACTGTCATCCCCACCCCACCCCTACCTCA CAAGCTGTGTTGACTGTCATCGCCACCCCACCCCTACCTCA < 41bp 0.61535416477207 0.853882106404335 0.15910143 0.68559194 prediction 0.477055883264531 Functional Gain - PARVB ENSG00000188677 UTR3 Human protein_coding chr22:44564681 chr22:44564682 . . 0 22 hm5C_associated_SNPs_111814 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr22:44564676-44564736
64251 chr8 26441385 26441385 1 + C T SKCM 26441384 + 26441364 26441404 41 GCCCACTCCCGGATGGTGATCCCCGGAGGAATTGACGTCCA GCCCACTCCCGGATGGTGATCTCCGGAGGAATTGACGTCCA < 41bp 0.575714285259727 0.814224533518699 0.48052382 0.9029639 prediction 0.477020496517944 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26441384 chr8:26441385 nonsynonymous SNV 0.549 5 22 hm5C_associated_SNPs_111818 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr8:26441352-26441391
64251 chr1 112298676 112298676 1 + C G LUAD 112298672 + 112298652 112298692 41 CCTGTGAGGATCCTGCGGACCGCTCAGGATCTCAGCAGCCC CCTGTGAGGATCCTGCGGACCGCTGAGGATCTCAGCAGCCC < 41bp 0.585973001996294 0.824483117158421 0.10509035 0.3740856 prediction 0.477020230324254 Functional Gain - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112298672 chr1:112298676 nonsynonymous SNV 0.318 1 25 hm5C_associated_SNPs_111819 0 0 1 FMR1 POSTAR2 ENCODE chr1:112298634-112298840
64251 chr17 7320563 7320563 1 + C A SARC 7320562 + 7320542 7320582 41 GCCGCCTGCCACCCTGCCTCCCGAGCCCGAGCCCGAGCCCG GCCGCCTGCCACCCTGCCTCCAGAGCCCGAGCCCGAGCCCG < 41bp 0.492860720428491 0.738509407547144 0.47292855 0.86183536 prediction 0.477018815094288 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7320562 chr17:7320563 synonymous SNV . 0 22 hm5C_associated_SNPs_111820 0 0 1 EIF3H POSTAR2 ENCODE chr17:7320499-7320589
64251 chr2 27282176 27282176 1 + C T SKCM 27282175 + 27282155 27282195 41 TCTCCACAGATGAAGAATTCCCCCAGCTTTCCTTTTCATGG TCTCCACAGATGAAGAATTCCTCCAGCTTTCCTTTTCATGG < 41bp 0.56881415476412 0.807323247772491 0.03717208 0.9239821 prediction 0.477018186016743 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27282175 chr2:27282176 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_111821 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:27282162-27282183
64251 chr1 27267969 27267969 1 + C A UCEC 27267965 + 27267945 27267985 41 CAGCTTATCACACAGACTTTCAGCCACCACAATCAGCTGGC CAGCTTATCACACAGACTTTCAGCAACCACAATCAGCTGGC < 41bp 0.321399226677424 0.738506770238708 0.20144415 0.2655141 prediction 0.477013540477416 Functional Gain - NUDC ENSG00000090273 CDS Human protein_coding chr1:27267965 chr1:27267969 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_111822 0 0 19 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:27267940-27267980
64251 chr2 120005459 120005459 1 + C T rs149956812 120005458 + 120005438 120005478 41 TTCTATGCCTACAACTTCGTCCGGGACGTTCTGCAGCCCTA TTCTATGCCTACAACTTCGTCTGGGACGTTCTGCAGCCCTA < 41bp 0.513737225488343 0.752238028412493 0.8935255 0.8915324 prediction 0.4770016058483 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005458 chr2:120005459 nonsynonymous SNV 0.944 3 22 hm5C_associated_SNPs_111826 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:120005440-120005460
64251 chr9 132397719 132397719 1 + T C rs186769206 132397717 + 132397697 132397737 41 ACCTCCCCGATGAGATCTACCATGTCTATAGCTTTGCCCTG ACCTCCCCGATGAGATCTACCACGTCTATAGCTTTGCCCTG < 41bp 0.533109948207048 0.771588090169994 0.14865983 0.24471202 prediction 0.476956283925892 Functional Gain - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132397717 chr9:132397719 synonymous SNV . 0 23 hm5C_associated_SNPs_111834 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:132397710-132397720
64251 chr17 1636950 1636950 1 + C A rs11657394 1636949 + 1636929 1636969 41 CCACCATGCCCGGCACCGGGCCCGAGTGGGACCCCCATGGT CCACCATGCCCGGCACCGGGCACGAGTGGGACCCCCATGGT < 41bp 0.538188770033826 0.776664462406642 0.28279215 0.50963736 prediction 0.476951384745632 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1636949 chr17:1636950 nonsynonymous SNV 0.064 0 22 hm5C_associated_SNPs_111835 0 1 1 PPIG POSTAR2 ENCODE chr17:1636893-1636953
64251 chr17 76203600 76203600 1 + T A rs9903738 76203596 + 76203576 76203616 41 GCTGGTCTCAAACTCCTAACCTTGTGATTCGCCCGCCTTGG GCTGGTCTCAAACTCCTAACCTTGAGATTCGCCCGCCTTGG < 41bp 0.592926036855299 0.831400331318768 0.07989398 0.07784963 prediction 0.476948588926938 Functional Gain - AFMID ENSG00000183077 UTR3 Human protein_coding chr17:76203596 chr17:76203600 . . 0 25 hm5C_associated_SNPs_111837 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:76203576-76203626
64251 chr6 26468313 26468313 1 + T C UCEC 26468311 + 26468291 26468331 41 AGAGAGATTCGACAGTCAGCCTTGTGTCCTAGGCCGGGAGA AGAGAGATTCGACAGTCAGCCTCGTGTCCTAGGCCGGGAGA < 41bp 0.546976757185162 0.785450527073752 0.050180614 0.07289484 prediction 0.476947539777181 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26468311 chr6:26468313 nonsynonymous SNV 0.060 4 23 hm5C_associated_SNPs_111838 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr6:26468307-26468334
64251 chr14 24769329 24769329 1 + C A COAD 24769328 + 24769308 24769348 41 GCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGG GCTCCAGATTCGCACCCGCACATGAGCCCGGAAGCTCTGGG < 41bp 0.546663652782233 0.785131125387433 0.24044904 0.31023282 prediction 0.4769349452104 Functional Gain - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24769328 chr14:24769329 nonsynonymous SNV 0.496 3 22 hm5C_associated_SNPs_111840 0 0 1 RPS3 POSTAR2 ENCODE chr14:24769234-24769351
64251 chr12 51207804 51207804 1 + C T SKCM 51207803 + 51207783 51207823 41 TTGATTAAAGTTGCCATTGCCCCAAATGGAGCCTTACAGTT TTGATTAAAGTTGCCATTGCCTCAAATGGAGCCTTACAGTT < 41bp 0.550825409004192 0.789278557275973 0.18470865 0.8166809 prediction 0.476906296543563 Functional Gain - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51207803 chr12:51207804 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_111843 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:51207795-51207819
64251 chr19 36037642 36037642 1 + C T rs571165424 36037641 + 36037621 36037661 41 CCTTGTCATGTCCCGGAATGCCGGCAAGGGAGAGTACAAGA CCTTGTCATGTCCCGGAATGCTGGCAAGGGAGAGTACAAGA < 41bp 0.50208208097958 0.740515828358724 0.3479849 0.34810206 prediction 0.476867494758289 Functional Gain - TMEM147 ENSG00000105677 CDS Human protein_coding chr19:36037641 chr19:36037642 synonymous SNV . 0 22 hm5C_associated_SNPs_111850 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:36037636-36037669
64251 chr6 160468876 160468876 1 + C A UCEC 160468875 + 160468855 160468895 41 GGTACACCAGCTATGCCTGCCCGGAGGAGCCCCTGGAATGC GGTACACCAGCTATGCCTGCCAGGAGGAGCCCCTGGAATGC < 41bp 0.482433686075521 0.738419656895285 0.81788516 0.9013721 prediction 0.47683931379057 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160468875 chr6:160468876 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_111856 0 0 6 BUD13 POSTAR2 ENCODE chr6:160468867-160468924
64251 chr11 62496085 62496085 1 + C G rs541716683 62496084 + 62496064 62496104 41 AATGTTGGGCTTCATTATTCCCACATCCCTTTCCTTACTAC AATGTTGGGCTTCATTATTCCGACATCCCTTTCCTTACTAC < 41bp 0.437331953781014 0.738418455124383 0.090622365 0.4423104 prediction 0.476836910248767 Functional Gain - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62496084 chr11:62496085 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_111859 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr11:62496063-62496111
64251 chr1 3395002 3395002 1 + T C rs74050529 3395000 + 3394980 3395020 41 CTCCACAGCGAGGAGAGCTACATGGTCCAGGACTACGCCCA CTCCACAGCGAGGAGAGCTACACGGTCCAGGACTACGCCCA < 41bp 0.558698506160007 0.797116803726715 0.8847897 0.9064126 prediction 0.476836595133416 Functional Gain - ARHGEF16 ENSG00000130762 CDS Human protein_coding chr1:3395000 chr1:3395002 nonsynonymous SNV 0.170 0 23 hm5C_associated_SNPs_111860 0 0 5 BUD13 POSTAR2 ENCODE chr1:3394909-3395007
64251 chr3 37081737 37081737 1 + T C LIHC 37081735 + 37081715 37081755 41 TGTGTGAATCCTCAGTGGGCCTTGGCACAGCATCAAACCAA TGTGTGAATCCTCAGTGGGCCTCGGCACAGCATCAAACCAA < 41bp 0.509297289529297 0.747711996251596 0.14670339 0.14385957 prediction 0.476829413444599 Functional Gain - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37081735 chr3:37081737 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_111862 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:37081730-37081783
64251 chr6 160198422 160198422 1 + C G LUSC 160198421 + 160198401 160198441 41 ACCTTTAGCACGGATAGTTTCCTGGTCCCAAGTGGGTGTGG ACCTTTAGCACGGATAGTTTCGTGGTCCCAAGTGGGTGTGG < 41bp 0.41356315977984 0.738393972031698 0.07309055 0.8816428 prediction 0.476787944063397 Functional Gain - ACAT2 ENSG00000120437 CDS Human protein_coding chr6:160198421 chr6:160198422 synonymous SNV . 0 22 hm5C_associated_SNPs_111868 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:160198406-160198444
64251 chr7 48146548 48146548 1 + T C UCEC 48146546 + 48146526 48146566 41 GCAGAGTTTGAGCAGATTGTCCTGGGGAAGCGGGTCATCCG GCAGAGTTTGAGCAGATTGTCCCGGGGAAGCGGGTCATCCG < 41bp 0.5665081889468 0.804877071370238 0.3159062 0.5169057 prediction 0.476737764846876 Functional Gain - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48146546 chr7:48146548 nonsynonymous SNV 0.937 5 23 hm5C_associated_SNPs_111870 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr7:48146526-48146550
64251 chr2 211473198 211473198 1 + T C LUSC 211473196 + 211473176 211473216 41 TTTGAACCTAGCCTGGATTACATGGTCACCAAGATTCCCCG TTTGAACCTAGCCTGGATTACACGGTCACCAAGATTCCCCG < 41bp 0.459300172332969 0.738368142819518 0.05798474 0.08900106 prediction 0.476736285639036 Functional Gain - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211473196 chr2:211473198 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_111872 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr2:211473180-211473200
64251 chr15 42137072 42137072 1 + C A COAD 42137071 + 42137051 42137091 41 TGGCCAACCTTTATGAGGACCCAGAGTGGTCTCAGAAGGAC TGGCCAACCTTTATGAGGACCAAGAGTGGTCTCAGAAGGAC < 41bp 0.477514421960095 0.738367632633214 0.65247333 0.63097847 prediction 0.476735265266428 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42137071 chr15:42137072 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_111873 0 0 2 EFTUD2 POSTAR2 ENCODE chr15:42137041-42137090
64251 chr20 61287908 61287908 1 + C G SKCM 61287907 + 61287887 61287927 41 CCCACCCAGCAGGAGGGCATCCCCGGGCACACCCCTGAGCC CCCACCCAGCAGGAGGGCATCGCCGGGCACACCCCTGAGCC < 41bp 0.635424749642893 0.873783140865031 0.18909833 0.26099432 prediction 0.476716782444276 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61287907 chr20:61287908 synonymous SNV . 0 22 hm5C_associated_SNPs_111876 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:61287907-61287908
64251 chr5 148626049 148626049 1 + C A STAD 148626048 + 148626028 148626068 41 TTTCTGTCTTTTGACAGTGCCCCGAGCCAGAAGGTTCTCGT TTTCTGTCTTTTGACAGTGCCACGAGCCAGAAGGTTCTCGT < 41bp 0.545996327683245 0.784347656502808 0.21276751 0.15242013 prediction 0.476702657639126 Functional Gain - ABLIM3 ENSG00000173210 CDS Human protein_coding chr5:148626048 chr5:148626049 synonymous SNV . 0 22 hm5C_associated_SNPs_111877 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:148626042-148626092
64251 chr1 84945092 84945092 1 + C G UCEC 84945088 + 84945068 84945108 41 CGACGGAAAACGGGGTCCAACCCCCGAAAGCGGCTGCCTTT CGACGGAAAACGGGGTCCAACCCCGGAAAGCGGCTGCCTTT < 41bp 0.596301307395333 0.834648137542829 0.2177451 0.4264679 prediction 0.476693660294992 Functional Gain - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84945088 chr1:84945092 nonsynonymous SNV 0.540 1 25 hm5C_associated_SNPs_111879 0 0 2 GRWD1 POSTAR2 ENCODE chr1:84945025-84945095
64251 chr1 12061527 12061527 1 + C T LUAD 12061526 + 12061506 12061546 41 CTGGGCGTGGTGGATCGATCCCAGGCCGGGGACCGCATCTT CTGGGCGTGGTGGATCGATCCTAGGCCGGGGACCGCATCTT < 41bp 0.526598731349044 0.764939269219993 0.47898984 0.4215323 prediction 0.476681075741897 Functional Gain - MFN2 ENSG00000116688 CDS Human protein_coding chr1:12061526 chr1:12061527 stopgain 0.943 1 22 hm5C_associated_SNPs_111880 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr1:12061512-12061527
64251 chr3 69151015 69151015 1 + C A UCEC 69151014 + 69150994 69151034 41 CTGAGTCCCTTCAACATGATCCTGGGAGGAATCGTGGTGGT CTGAGTCCCTTCAACATGATCATGGGAGGAATCGTGGTGGT < 41bp 0.540857209019871 0.779184029689869 0.33671296 0.76619464 prediction 0.476653641339997 Functional Gain - ARL6IP5 ENSG00000144746 CDS Human protein_coding chr3:69151014 chr3:69151015 nonsynonymous SNV 0.980 2 22 hm5C_associated_SNPs_111884 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr3:69151000-69151020
64251 chr1 114524200 114524200 1 + C T SKCM 114524199 + 114524179 114524219 41 ACCCGTCCTGCCAGTCGGGCCCGCATCCAGTGCTCCTTTGA ACCCGTCCTGCCAGTCGGGCCTGCATCCAGTGCTCCTTTGA < 41bp 0.552585569007129 0.790902005725505 0.17613429 0.18674445 prediction 0.476632873436753 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524199 chr1:114524200 nonsynonymous SNV 0.990 5 22 hm5C_associated_SNPs_111889 0 0 1 SND1 POSTAR2 ENCODE chr1:114524179-114524263
64251 chr1 230810845 230810845 1 + C A UCEC 230810844 + 230810824 230810864 41 AGTTACCCTCGCTTTTTAATCCTGGGAATCCCGATGCATTT AGTTACCCTCGCTTTTTAATCATGGGAATCCCGATGCATTT < 41bp 0.473551765535176 0.738311936111047 0.894768 0.90695727 prediction 0.476623872222093 Functional Gain - COG2 ENSG00000135775 CDS Human protein_coding chr1:230810844 chr1:230810845 nonsynonymous SNV 0.325 4 22 hm5C_associated_SNPs_111890 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr1:230810825-230810847
64251 chr18 77797460 77797460 1 + C T SKCM 77797459 + 77797439 77797479 41 TGACAGACCTGCTGTGTACCCCTGAAGTGAGTCAGGAGCTG TGACAGACCTGCTGTGTACCCTTGAAGTGAGTCAGGAGCTG < 41bp 0.537909532817607 0.776217892672682 0.19735533 0.12020686 prediction 0.476616719710151 Functional Gain - RBFA ENSG00000101546;ENSG00000267127 CDS Human other chr18:77797459 chr18:77797460 nonsynonymous SNV 0.861 0 22 hm5C_associated_SNPs_111891 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:77797431-77797492
64251 chr4 17625374 17625374 1 + C T LGG 17625373 + 17625353 17625393 41 CCTCAGGGCTCCTTGGCCTACCTGGAGCAGGCATCTGCCAA CCTCAGGGCTCCTTGGCCTACTTGGAGCAGGCATCTGCCAA < 41bp 0.498232479310036 0.738298998741981 0.36192644 0.37206036 prediction 0.476597997483963 Functional Gain - MED28 ENSG00000118579 CDS Human protein_coding chr4:17625373 chr4:17625374 synonymous SNV . 0 22 hm5C_associated_SNPs_111895 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:17625347-17625377
64251 chr11 48149502 48149502 1 + C T SKCM 48149501 + 48149481 48149521 41 AGTGAGCCTCGCGCTGTCATCCCCGGACTCCGCTCCAGCAC AGTGAGCCTCGCGCTGTCATCTCCGGACTCCGCTCCAGCAC < 41bp 0.558730596100696 0.797013299752044 0.48841223 0.89811957 prediction 0.476565407302697 Functional Gain - PTPRJ ENSG00000149177 CDS Human protein_coding chr11:48149501 chr11:48149502 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_111897 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:48149486-48149537
64251 chr16 58437126 58437126 1 + C A KIRC 58437125 + 58437105 58437145 41 GGACTGTGTTCAGTGCAGATCCCAATGTGGTGGACCTCCAC GGACTGTGTTCAGTGCAGATCACAATGTGGTGGACCTCCAC < 41bp 0.527039975338617 0.765320801478663 0.3029039 0.30401978 prediction 0.476561652280093 Functional Gain - GINS3 ENSG00000181938 CDS Human protein_coding chr16:58437125 chr16:58437126 nonsynonymous SNV 0.974 3 22 hm5C_associated_SNPs_111898 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:58437089-58437127
64251 chr1 15546187 15546187 1 + C T UCEC 15546186 + 15546166 15546206 41 TAGAGCCTTTGACTCCTCCACCGCAGTATGATGAAGTCCAG TAGAGCCTTTGACTCCTCCACTGCAGTATGATGAAGTCCAG < 41bp 0.549459721005189 0.787740165417909 0.055550605 0.08071968 prediction 0.47656088882544 Functional Gain - TMEM51 ENSG00000171729 CDS Human protein_coding chr1:15546186 chr1:15546187 nonsynonymous SNV 0.195 4 22 hm5C_associated_SNPs_111899 0 0 1 DDX6 POSTAR2 ENCODE chr1:15546165-15546207
64251 chr3 171965375 171965375 1 + C T SKCM 171965374 + 171965354 171965394 41 TGGTGGTCACACCCCAGTCTCCTGAGTGTTATCCCCCAAGC TGGTGGTCACACCCCAGTCTCTTGAGTGTTATCCCCCAAGC < 41bp 0.53889327565234 0.777166768091689 0.25687778 0.25893652 prediction 0.476546984878697 Functional Gain - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:171965374 chr3:171965375 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_111900 0 0 5 HNRNPK POSTAR2 ENCODE chr3:171965342-171965465
64251 chr7 5104237 5104237 1 + C T UCEC 5104236 + 5104216 5104256 41 GAATGTGGGAAATCCTTCTCCCGCAAGTCTGCTCTCAGTGA GAATGTGGGAAATCCTTCTCCTGCAAGTCTGCTCTCAGTGA < 41bp 0.506786839169285 0.745043941753003 0.07271266 0.0433245 prediction 0.476514205167435 Functional Gain - RBAK ENSG00000146587 CDS Human protein_coding chr7:5104236 chr7:5104237 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_111904 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr7:5104212-5104238
64251 chr8 55060069 55060069 1 + C G LUAD 55060065 + 55060045 55060085 41 CCGTGGGTACCTGGCGGATCCTGCCAAATTTCCTGAAGCAC CCGTGGGTACCTGGCGGATCCTGCGAAATTTCCTGAAGCAC < 41bp 0.462064962138562 0.738247772805063 0.113542855 0.25942165 prediction 0.476495545610126 Functional Gain - MRPL15 ENSG00000137547 CDS Human protein_coding chr8:55060065 chr8:55060069 synonymous SNV . 0 25 hm5C_associated_SNPs_111906 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:55060020-55060100
64251 chr1 33945211 33945211 1 + C A UCEC 33945210 + 33945190 33945230 41 ACTATCTTGCCTAGGGAGGTCCAGACCTGGGTGCAGGCACG ACTATCTTGCCTAGGGAGGTCAAGACCTGGGTGCAGGCACG < 41bp 0.550882572643161 0.789127690310105 0.4555696 0.86618084 prediction 0.476490235333888 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33945210 chr1:33945211 nonsynonymous SNV 0.955 3 22 hm5C_associated_SNPs_111908 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:33945211-33945230
64251 chr20 37400374 37400374 1 + C A rs3752289 37400373 + 37400353 37400393 41 TCTATGTCCCCATCCGCCTGCCGAAGCAGGCCTCCCGCTCC TCTATGTCCCCATCCGCCTGCAGAAGCAGGCCTCCCGCTCC < 41bp 0.532266414880726 0.770508397357451 0.7122152 0.6659051 prediction 0.476483964953449 Functional Gain - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37400373 chr20:37400374 nonsynonymous SNV 0.910 4 22 hm5C_associated_SNPs_111910 0 0 1 UCHL5 POSTAR2 ENCODE chr20:37400360-37400409
64251 chr8 38065274 38065274 1 + C T UCEC 38065273 + 38065253 38065293 41 GGGGGCAGGTTCCAGGATATCCGCCTTCACAGGTGAGTTGT GGGGGCAGGTTCCAGGATATCTGCCTTCACAGGTGAGTTGT < 41bp 0.509036552776834 0.747267871594026 0.100498736 0.15645424 prediction 0.476462637634384 Functional Gain - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38065273 chr8:38065274 nonsynonymous SNV 0.955 2 22 hm5C_associated_SNPs_111912 0 0 6 IGF2BP1 POSTAR2 ENCODE chr8:38065114-38065275
64251 chr22 26114346 26114346 1 + C A LUAD 26114345 + 26114325 26114365 41 TGGAGAGGAGAGGGAGAGTCCCGGGTAAGTCTAAGGCAGCC TGGAGAGGAGAGGGAGAGTCCAGGGTAAGTCTAAGGCAGCC < 41bp 0.526033826560367 0.764238414802233 0.8854053 0.8805258 prediction 0.476409176483732 Functional Gain - GRK3 ENSG00000100077 CDS Human protein_coding chr22:26114345 chr22:26114346 synonymous SNV . 0 22 hm5C_associated_SNPs_111918 0 0 1 U2AF2 POSTAR2 ENCODE chr22:26114313-26114374
64251 chr4 166300638 166300638 1 + C A COAD 166300637 + 166300617 166300657 41 AGCTTCGAGGGCCGGGAGCTCCTGGTCATCGAGCTGTCCGA AGCTTCGAGGGCCGGGAGCTCATGGTCATCGAGCTGTCCGA < 41bp 0.529499558499717 0.767696961823084 0.17431033 0.25249022 prediction 0.476394806646733 Functional Gain - CPE ENSG00000109472 CDS Human protein_coding chr4:166300637 chr4:166300638 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_111921 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:166300620-166300640
64251 chr13 103528187 103528187 1 + C T OV 103528186 + 103528166 103528206 41 GAAGATGGTCCTCGTGACCGCCAGATCTGTGTTTGGGAAGA GAAGATGGTCCTCGTGACCGCTAGATCTGTGTTTGGGAAGA < 41bp 0.499799781771094 0.738194374313441 0.8709034 0.37402117 prediction 0.476388748626883 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899 CDS Human protein_coding chr13:103528186 chr13:103528187 synonymous SNV . 0 22 hm5C_associated_SNPs_111922 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr13:103528166-103528203
64251 chr7 29915557 29915557 1 + C A SARC 29915556 + 29915536 29915576 41 AAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGATCGA AAAGTCACGCAGATCAACGACAGCAGTGCCCCGCAGATCGA < 41bp 0.559942909777264 0.798119778151836 0.33202547 0.46562034 prediction 0.476353736749144 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29915556 chr7:29915557 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_111928 0 0 1 YBX3 POSTAR2 ENCODE chr7:29915542-29915579
64251 chr2 162227718 162227718 1 + C G LIHC 162227714 + 162227694 162227734 41 TTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGG TTGTTGGTTGGTATCACAGTCACCGTGGCTTTGGTTGTTGG < 41bp 0.469511815925476 0.738175037811404 0.042914867 0.118591815 prediction 0.476350075622809 Functional Gain - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162227714 chr2:162227718 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_111929 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:162227680-162227833
64251 chr1 10683172 10683172 1 + C T SKCM 10683171 + 10683151 10683191 41 GAGCTGAGTGGCAGCGTGGCCCAGACAGGTAAAGATTAATG GAGCTGAGTGGCAGCGTGGCCTAGACAGGTAAAGATTAATG < 41bp 0.487029195978265 0.738153259801883 0.019635588 0.042792827 prediction 0.476306519603767 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10683171 chr1:10683172 stopgain 1.000 1 22 hm5C_associated_SNPs_111936 0 0 2 PPIG POSTAR2 ENCODE chr1:10683089-10683173
64251 chr17 7214700 7214700 1 + T G COAD 7214697 + 7214677 7214717 41 CATCCAGGATGGGTACCTATCACTGCTCCAGGACAGCGGGG CATCCAGGATGGGTACCTATCACGGCTCCAGGACAGCGGGG < 41bp 0.688340914967471 0.926485402883648 0.24108067 0.8581458 prediction 0.476288975832354 Functional Gain - EIF5A ENSG00000132507 CDS Human protein_coding chr17:7214697 chr17:7214700 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_111938 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7214666-7214724
64251 chr17 40693051 40693051 1 + C T SKCM 40693050 + 40693030 40693070 41 CCTGCTCCTTCCTTCTGGCTCCGGAAGACCCCATATTCCCC CCTGCTCCTTCCTTCTGGCTCTGGAAGACCCCATATTCCCC < 41bp 0.55623808017324 0.794379693023294 0.3797869 0.20958322 prediction 0.47628322570011 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40693050 chr17:40693051 nonsynonymous SNV 0.652 3 22 hm5C_associated_SNPs_111940 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:40693006-40693051
64251 chr20 334276 334276 1 + C A UCEC 334275 + 334255 334295 41 TATCCAGCCCAAGAGGGACTCCTGAGCTGCCCACATGGCCT TATCCAGCCCAAGAGGGACTCATGAGCTGCCCACATGGCCT < 41bp 0.476926107549625 0.738141278519618 0.20751694 0.36814445 prediction 0.476282557039235 Functional Gain - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334275 chr20:334276 synonymous SNV . 0 22 hm5C_associated_SNPs_111941 0 0 7 CPSF3 POSTAR2 GSE37401,GSM917668 chr20:334249-334285
64251 chr22 24836970 24836970 1 + T C COAD 24836968 + 24836948 24836988 41 CTCTGCTGGCTGCCCCTACACATCATCAACTGCTTCACTTT CTCTGCTGGCTGCCCCTACACACCATCAACTGCTTCACTTT < 41bp 0.579539309055499 0.817680429953526 0.039226264 0.053681463 prediction 0.476282241796054 Functional Gain - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24836968 chr22:24836970 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_111942 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:24836938-24836978
64251 chr16 23847555 23847555 1 + T C HNSC 23847553 + 23847533 23847573 41 GGCGAGGAGAGCACCGTGCGCTTCGCCCGCAAAGGCGCCCT GGCGAGGAGAGCACCGTGCGCTCCGCCCGCAAAGGCGCCCT < 41bp 0.495966207059941 0.738136068835581 0.08372751 0.08007917 prediction 0.476272137671161 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:23847553 chr16:23847555 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_111943 0 0 4 FMR1 POSTAR2 ENCODE chr16:23847488-23847600
64251 chr6 26021044 26021044 1 + C A rs73387434 26021040 + 26021020 26021060 41 GGTAGGGCTATTTGAGGACACTAACCTGTGCGCCATCCACG GGTAGGGCTATTTGAGGACACTAAACTGTGCGCCATCCACG < 41bp 0.344667778231855 0.738129526059207 0.4102968 0.45628798 prediction 0.476259052118413 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26021040 chr6:26021044 nonsynonymous SNV 0.923 2 25 hm5C_associated_SNPs_111947 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26020940-26021060
64251 chr7 6617262 6617262 1 + C G rs182391055 6617258 + 6617238 6617278 41 CACCTCGCCCGAGTCCGGGGCGGCCCCGGTGTCCCCTCCGA CACCTCGCCCGAGTCCGGGGCGGCGCCGGTGTCCCCTCCGA < 41bp 0.471836949013569 0.738096559948881 0.35480344 0.7981026 prediction 0.476193119897761 Functional Gain - ZDHHC4 ENSG00000136247 UTR5 Human protein_coding chr7:6617258 chr7:6617262 . . 0 25 hm5C_associated_SNPs_111959 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:6617248-6617284
64251 chr3 124449412 124449412 1 + C G UCEC 124449408 + 124449388 124449428 41 GGGGACTTCGTGCTGAAGAGCGGGCTTTCCTCCCCCATCTA GGGGACTTCGTGCTGAAGAGCGGGGTTTCCTCCCCCATCTA < 41bp 0.608672497435782 0.846761220395806 0.92917395 0.9517188 prediction 0.476177445920049 Functional Gain - UMPS ENSG00000114491 CDS Human protein_coding chr3:124449408 chr3:124449412 nonsynonymous SNV 0.927 2 25 hm5C_associated_SNPs_111962 0 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:124449384-124449422
64251 chr15 76633580 76633580 1 + T C HNSC 76633578 + 76633558 76633598 41 GGTGCAGACGTACCAGCCGCCGTGGAAGGCGCTCAGCGAGT GGTGCAGACGTACCAGCCGCCGCGGAAGGCGCTCAGCGAGT < 41bp 0.552661448396122 0.790749655920087 0.82918704 0.90963864 prediction 0.476176415047928 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76633578 chr15:76633580 nonsynonymous SNV 0.987 4 23 hm5C_associated_SNPs_111963 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:76633567-76633588
64251 chr12 64798543 64798543 1 + T G rs372201368 64798541 + 64798521 64798561 41 GCTCCGCTCCGCTGGCTGACCATCTGGAGTGCAGGCTGGGA GCTCCGCTCCGCTGGCTGACCAGCTGGAGTGCAGGCTGGGA < 41bp 0.46009267008554 0.73808438371474 0.27711266 0.6659602 prediction 0.476168767429479 Functional Gain - XPOT ENSG00000184575 UTR5 Human protein_coding chr12:64798541 chr12:64798543 . . 0 23 hm5C_associated_SNPs_111965 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr12:64798509-64798544
64251 chr2 163217304 163217304 1 + C A rs78355083 163217300 + 163217280 163217320 41 TCTGTGAAGAAGAAAATTATCTCCCTAGTTCAATCTGTAGT TCTGTGAAGAAGAAAATTATCTCCATAGTTCAATCTGTAGT < 41bp 0.349291682941357 0.738082790615042 0.1697577 0.9501514 prediction 0.476165581230084 Functional Gain - GCA ENSG00000115271 UTR3 Human protein_coding chr2:163217300 chr2:163217304 . . 0 25 hm5C_associated_SNPs_111966 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:163217225-163217307
64251 chr22 21800133 21800133 1 + A G BLCA 21800130 + 21800110 21800150 41 AGGGGGCCGAGGACAACCACCTGAGCCTGCTGGAGGCGCCT AGGGGGCCGAGGACAACCACCTGGGCCTGCTGGAGGCGCCT < 41bp 0.488977769525742 0.738082198446475 0.39221257 0.52087045 prediction 0.476164396892949 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800130 chr22:21800133 nonsynonymous SNV 0.845 0 24 hm5C_associated_SNPs_111967 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:21800098-21800136
64251 chr4 78792967 78792967 1 + T G SKCM 78792964 + 78792944 78792984 41 GACATCACTTTGTTCTTGTTCTGTAAACATCCGAGTGCCCA GACATCACTTTGTTCTTGTTCTGGAAACATCCGAGTGCCCA < 41bp 0.674944183064893 0.91301337669514 0.12930158 0.20759451 prediction 0.476138387260494 Functional Gain - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78792964 chr4:78792967 nonsynonymous SNV 0.605 1 24 hm5C_associated_SNPs_111970 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:78792948-78792986
64251 chr1 214171306 214171306 1 + C T SKCM 214171305 + 214171285 214171325 41 CTCTGCCACCACGGGCTTCACCACGTCCACCTTCCGCCACC CTCTGCCACCACGGGCTTCACTACGTCCACCTTCCGCCACC < 41bp 0.502916498416766 0.740979664865133 0.24154282 0.25239223 prediction 0.476126332896734 Functional Gain - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214171305 chr1:214171306 synonymous SNV . 0 22 hm5C_associated_SNPs_111972 0 0 3 DDX6 POSTAR2 ENCODE chr1:214171281-214171394
64251 chr7 131012753 131012753 1 + C G PRAD 131012752 + 131012732 131012772 41 CCTTTTCCTCCACCTACCTTCCCGAGTAAGTGCCGGGCCTT CCTTTTCCTCCACCTACCTTCGCGAGTAAGTGCCGGGCCTT < 41bp 0.440829241426975 0.738062737394734 0.12097868 0.30505273 prediction 0.476125474789469 Functional Gain - MKLN1 ENSG00000128585 CDS Human protein_coding chr7:131012752 chr7:131012753 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_111974 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585670 chr7:131012729-131012755
64251 chr19 37853715 37853715 1 + T C LAML 37853713 + 37853693 37853733 41 GGATTGTGGACGAGGCTTTACTTGGAAGTCGAACCTCTTTA GGATTGTGGACGAGGCTTTACTCGGAAGTCGAACCTCTTTA < 41bp 0.5504646812829 0.788521899339921 0.051480144 0.031077474 prediction 0.476114436114042 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37853713 chr19:37853715 nonsynonymous SNV 0.993 0 23 hm5C_associated_SNPs_111977 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37853572-37853810
64251 chr1 160321592 160321592 1 + C T SKCM 160321591 + 160321571 160321611 41 CAGGGTTGTGGTTGCTGCCACCCGGGTGAGTGTTGGCTTCT CAGGGTTGTGGTTGCTGCCACTCGGGTGAGTGTTGGCTTCT < 41bp 0.519462093567778 0.757517934808105 0.23013416 0.22717077 prediction 0.476111682480654 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160321591 chr1:160321592 synonymous SNV . 0 22 hm5C_associated_SNPs_111978 0 0 9 BUD13 POSTAR2 ENCODE chr1:160321574-160321639
64251 chr3 158539803 158539803 1 + C T SKCM 158539802 + 158539782 158539822 41 TGTCATATCAGCTCCCATGTCCCCGGTGTTTGGGCTCCTGG TGTCATATCAGCTCCCATGTCTCCGGTGTTTGGGCTCCTGG < 41bp 0.565934789133888 0.803980247805 0.14072683 0.15027124 prediction 0.476090917342225 Functional Gain - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158539802 chr3:158539803 synonymous SNV . 0 22 hm5C_associated_SNPs_111983 0 0 1 KHSRP POSTAR2 ENCODE chr3:158539654-158539837
64251 chr3 3170829 3170829 1 + C T rs368274081 3170828 + 3170808 3170848 41 CACAATGAAGTTGCAGTCTCCCGAATTCCAGTCACTTTTCA CACAATGAAGTTGCAGTCTCCTGAATTCCAGTCACTTTTCA < 41bp 0.530769108457117 0.768812368705486 0.09446427 0.06270677 prediction 0.476086520496737 Functional Gain - TRNT1 ENSG00000072756 CDS Human protein_coding chr3:3170828 chr3:3170829 synonymous SNV . 0 22 hm5C_associated_SNPs_111984 1 0 5 ZC3H7B POSTAR2 GSE38201,GSM936510 chr3:3170799-3170830
64251 chr2 204245035 204245035 1 + T C COAD 204245033 + 204245013 204245053 41 AGATTATTGCTCCAGCCAACCTTGAACGACCAGTTCGTTAT AGATTATTGCTCCAGCCAACCTCGAACGACCAGTTCGTTAT < 41bp 0.451308787611777 0.738033202898208 0.061095297 0.50310355 prediction 0.476066405796417 Functional Gain - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204245033 chr2:204245035 synonymous SNV . 0 23 hm5C_associated_SNPs_111987 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:204245009-204245043
64251 chr20 3016568 3016568 1 + C T UCEC 3016567 + 3016547 3016587 41 CAGCAGCAGTCAGGGAACCACCCCATCACCGTGCACTGCAG CAGCAGCAGTCAGGGAACCACTCCATCACCGTGCACTGCAG < 41bp 0.595719500279156 0.833740833113802 0.10699949 0.971599 prediction 0.476042665669293 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:3016567 chr20:3016568 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_111992 0 0 2 AARS POSTAR2 ENCODE chr20:3016565-3016591
64251 chr15 50494774 50494774 1 + T G UCEC 50494772 + 50494752 50494792 41 GGATTGAAGGCAGATGATGTCATCTATATCACTCTGCCCTT GGATTGAAGGCAGATGATGTCAGCTATATCACTCTGCCCTT < 41bp 0.386434140764837 0.738014826614092 0.063030094 0.34765404 prediction 0.476029653228183 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50494772 chr15:50494774 nonsynonymous SNV 0.975 1 23 hm5C_associated_SNPs_111994 0 0 1 RBM15 POSTAR2 ENCODE chr15:50494745-50494789
64251 chr17 53014490 53014490 1 + C T UCEC 53014489 + 53014469 53014509 41 GACTACCAGTGAGCCTTCTGCCCCATCTCAAGATCTCCTCG GACTACCAGTGAGCCTTCTGCTCCATCTCAAGATCTCCTCG < 41bp 0.497807175795714 0.738011831233176 0.049135774 0.73585397 prediction 0.476023662466352 Functional Gain - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53014489 chr17:53014490 synonymous SNV . 0 22 hm5C_associated_SNPs_111998 0 0 2 GRWD1 POSTAR2 ENCODE chr17:53014468-53014606
64251 chr13 114145410 114145410 1 + C A rs555930341 114145406 + 114145386 114145426 41 GGCCGCTCCCTCCCGGACTCCCGGCCTCCCGGCCTCCCTGG GGCCGCTCCCTCCCGGACTCCCGGACTCCCGGCCTCCCTGG < 41bp 0.641502551216955 0.879496332876164 0.41319615 0.6956898 prediction 0.475987563318418 Functional Gain - TMCO3 ENSG00000150403 UTR5 Human protein_coding chr13:114145406 chr13:114145410 . . 0 25 hm5C_associated_SNPs_112006 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr13:114145409-114145410
64251 chr7 92027138 92027138 1 + C A OV 92027134 + 92027114 92027154 41 AGCTCTTCCCTGCGTGACTACACCCCTGCCAGTCGCTCTGA AGCTCTTCCCTGCGTGACTACACCACTGCCAGTCGCTCTGA < 41bp 0.301189554206374 0.737993345760537 0.25942364 0.3062404 prediction 0.475986691521074 Functional Gain - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92027134 chr7:92027138 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_112007 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr7:92027119-92027143
64251 chr19 36257798 36257798 1 + A G rs550616208 36257795 + 36257775 36257815 41 GCGGCGGAAGCTTGAACAGGCTCAGGGAAGCAAGGGTGACA GCGGCGGAAGCTTGAACAGGCTCGGGGAAGCAAGGGTGACA < 41bp 0.500220072302644 0.738202799770922 0.34603864 0.33351094 prediction 0.475965454936557 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36257795 chr19:36257798 nonsynonymous SNV 0.044 0 24 hm5C_associated_SNPs_112013 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:36257788-36257819
64251 chr5 96364252 96364252 1 + C A rs199927034 96364248 + 96364228 96364268 41 GTGGCTGTAGCATGCACAACCGCACCTCATTTTGTTGCCCA GTGGCTGTAGCATGCACAACCGCAACTCATTTTGTTGCCCA < 41bp 0.344884233604043 0.737980286075091 0.05864644 0.35439658 prediction 0.475960572150183 Functional Gain - LNPEP ENSG00000113441 UTR3 Human protein_coding chr5:96364248 chr5:96364252 . . 0 25 hm5C_associated_SNPs_112014 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:96364220-96364254
64251 chr19 16338999 16338999 1 + C T UCEC 16338998 + 16338978 16339018 41 ATCGAGAAGCACTCCCACAGCCGCATCGAGTACATGATCAA ATCGAGAAGCACTCCCACAGCTGCATCGAGTACATGATCAA < 41bp 0.569111284293948 0.807087229073967 0.116523564 0.11275786 prediction 0.47595188956004 Functional Gain - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16338998 chr19:16338999 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_112016 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:16338986-16339013
64251 chr1 24859664 24859664 1 + C T SKCM 24859663 + 24859643 24859683 41 TCTCCCCTCCAGCCTCTCCCCCGGTGGGGTGGAAGCAGAGC TCTCCCCTCCAGCCTCTCCCCTGGTGGGGTGGAAGCAGAGC < 41bp 0.487494254640633 0.737975675504483 0.26991454 0.16176355 prediction 0.475951351008967 Functional Gain - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24859663 chr1:24859664 nonsynonymous SNV 0.026 5 22 hm5C_associated_SNPs_112017 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:24859632-24859679
64251 chr22 40800308 40800308 1 + C T LAML 40800307 + 40800287 40800327 41 CCCCTCTGATGGAGGATGCTCCACAGAGGCTGCGGTGGCAG CCCCTCTGATGGAGGATGCTCTACAGAGGCTGCGGTGGCAG < 41bp 0.563321538668635 0.801292477669669 0.27485716 0.8958573 prediction 0.475941878002068 Functional Gain - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40800307 chr22:40800308 nonsynonymous SNV 0.181 0 22 hm5C_associated_SNPs_112018 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr22:40800308-40800309
64251 chr16 70503181 70503181 1 + C G SKCM 70503177 + 70503157 70503197 41 GTAGCGGGTTATCTGCAGAGCGCCCGGGCCCAGCTGTGGAG GTAGCGGGTTATCTGCAGAGCGCCGGGGCCCAGCTGTGGAG < 41bp 0.444687844806349 0.737968768150284 0.030622214 0.11202049 prediction 0.475937536300568 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70503177 chr16:70503181 nonsynonymous SNV 0.974 4 25 hm5C_associated_SNPs_112019 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:70503165-70503192
64251 chr11 609313 609313 1 + T C UCEC 609311 + 609291 609331 41 GTTTTCATCCAGCTCGATGACATGAGCTCGCCACCTTCTCC GTTTTCATCCAGCTCGATGACACGAGCTCGCCACCTTCTCC < 41bp 0.563462737401131 0.801423672672169 0.105920166 0.11898947 prediction 0.475921870542076 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:609311 chr11:609313 nonsynonymous SNV 0.936 1 23 hm5C_associated_SNPs_112021 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:609291-609332
64251 chr8 20067930 20067930 1 + C T LUAD 20067929 + 20067909 20067949 41 CTGGGGATATTCTCCGAACACCGGTGTCTGAGGATATGCTT CTGGGGATATTCTCCGAACACTGGTGTCTGAGGATATGCTT < 41bp 0.508227406403213 0.746181496712553 0.28950667 0.06595734 prediction 0.47590818061868 Functional Gain - ATP6V1B2 ENSG00000147416 CDS Human protein_coding chr8:20067929 chr8:20067930 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112022 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:20067906-20067931
64251 chr17 80445995 80445995 1 + C A LUSC 80445994 + 80445974 80446014 41 CTGCATACCACGTACCAGAGCCAGGAGCGTGGCACACACAG CTGCATACCACGTACCAGAGCAAGGAGCGTGGCACACACAG < 41bp 0.498286665121487 0.737943016124913 0.9192784 0.8989279 prediction 0.475886032249826 Functional Gain - NARF ENSG00000141562 CDS Human protein_coding chr17:80445994 chr17:80445995 nonsynonymous SNV 0.036 0 22 hm5C_associated_SNPs_112028 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:80445994-80445995
64251 chr18 67345064 67345064 1 + C T COAD 67345063 + 67345043 67345083 41 TGGGGAGCCCGACCTTCTGGCCGCAGGAGTGCAGCGGGAAC TGGGGAGCCCGACCTTCTGGCTGCAGGAGTGCAGCGGGAAC < 41bp 0.498393980842543 0.737924289933431 0.26540023 0.26882014 prediction 0.475848579866862 Functional Gain - DOK6 ENSG00000206052 CDS Human protein_coding chr18:67345063 chr18:67345064 synonymous SNV . 0 22 hm5C_associated_SNPs_112034 0 0 3 GRWD1 POSTAR2 ENCODE chr18:67345018-67345089
64251 chr7 72413459 72413459 1 + A G STAD 72413456 + 72413436 72413476 41 CCAGCCCGCATTTGGGGCCGCTGAGGGGCAGCCACCGGGGG CCAGCCCGCATTTGGGGCCGCTGGGGGGCAGCCACCGGGGG < 41bp 0.542701010361512 0.780614547944959 0.46972817 0.6948964 prediction 0.475827075166894 Functional Gain - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413456 chr7:72413459 nonsynonymous SNV 0.086 0 24 hm5C_associated_SNPs_112036 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:72413440-72413460
64251 chr22 42264749 42264749 1 + C T SKCM 42264748 + 42264728 42264768 41 GGCACGCTGCAGACCCTTGCCCCGGCTACGGTGCAGACAGT GGCACGCTGCAGACCCTTGCCTCGGCTACGGTGCAGACAGT < 41bp 0.480956617084912 0.737887866340969 0.4004027 0.5506272 prediction 0.475775732681939 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42264748 chr22:42264749 nonsynonymous SNV 0.924 3 22 hm5C_associated_SNPs_112046 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr22:42264726-42264753
64251 chr18 29704751 29704751 1 + C A LIHC 29704750 + 29704730 29704770 41 GTGTCAAGAATCAAATTTTACCAGACAGCGTTTACTGGATC GTGTCAAGAATCAAATTTTACAAGACAGCGTTTACTGGATC < 41bp 0.489730451013098 0.737887784859251 0.02076289 0.043604493 prediction 0.475775569718501 Functional Gain - RNF138 ENSG00000134758 CDS Human protein_coding chr18:29704750 chr18:29704751 synonymous SNV . 0 22 hm5C_associated_SNPs_112047 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:29704683-29704789
64251 chr15 67813876 67813876 1 - G T UCEC 67813877 - 67813857 67813897 41 TTCTGCCGGGCCAGGTCCTGCCAGGGAGCCTTGGAGCAGTG TTCTGCCGGGCCAGGTCCTGCAAGGGAGCCTTGGAGCAGTG < 41bp 0.517914807224749 0.755797904645177 0.7281364 0.8301834 prediction 0.475766194840856 Functional Gain - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67813877 chr15:67813876 nonsynonymous SNV 0.948 0 22 hm5C_associated_SNPs_112050 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:67813860-67813880
64251 chr12 56428444 56428444 1 + C T SKCM 56428443 + 56428423 56428463 41 GATGTGGAGTTGGTGGCACACCACAGCCTAGAGCCTGGCTT GATGTGGAGTTGGTGGCACACTACAGCCTAGAGCCTGGCTT < 41bp 0.528039668581515 0.765905313524376 0.10309249 0.2945133 prediction 0.475731289885722 Functional Gain - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428443 chr12:56428444 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_112058 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:56428431-56428451
64251 chr20 25201971 25201971 1 + T A KIRP 25201967 + 25201947 25201987 41 CAGGGTTTCAGGGCAGAAAGCAGGTACGGGGAGGGTTGCTG CAGGGTTTCAGGGCAGAAAGCAGGAACGGGGAGGGTTGCTG < 41bp 0.475099505537958 0.737857098746183 0.90465885 0.88694906 prediction 0.475714197492366 Functional Gain - ENTPD6 ENSG00000197586 splicing Human protein_coding chr20:25201967 chr20:25201971 . 0.055 0 25 hm5C_associated_SNPs_112060 0 0 2 DDX24 POSTAR2 ENCODE chr20:25201958-25202045
64251 chr2 113950132 113950132 1 + C T SKCM 113950131 + 113950111 113950151 41 CTCTATCGCCTGGAGGGCTTCCGGAAGTCTGAAGTGGCTGC CTCTATCGCCTGGAGGGCTTCTGGAAGTCTGAAGTGGCTGC < 41bp 0.555598871395407 0.793443451294916 0.855995 0.8239559 prediction 0.475689159799016 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113950131 chr2:113950132 nonsynonymous SNV 0.402 3 22 hm5C_associated_SNPs_112066 0 0 2 PPIG POSTAR2 ENCODE chr2:113950087-113950205
64251 chr19 42402678 42402678 1 + C T COAD 42402677 + 42402657 42402697 41 CGGCTGGCGGGAACTCGTCCCCCCAGACACCCTGCACAGCC CGGCTGGCGGGAACTCGTCCCTCCAGACACCCTGCACAGCC < 41bp 0.535298981476681 0.773139075279735 0.3880045 0.9665426 prediction 0.475680187606107 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42402677 chr19:42402678 synonymous SNV . 0 22 hm5C_associated_SNPs_112067 0 0 7 FMR1 POSTAR2 ENCODE chr19:42402590-42402704
64251 chr16 29853106 29853106 1 + C A LUSC 29853105 + 29853085 29853125 41 AAGACCCGTGTGGTCAGCTACCGCGTGCCCCACAACGCTGC AAGACCCGTGTGGTCAGCTACAGCGTGCCCCACAACGCTGC < 41bp 0.478470550607797 0.737837632122758 0.3246135 0.7235795 prediction 0.475675264245515 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29853105 chr16:29853106 nonsynonymous SNV 0.837 3 22 hm5C_associated_SNPs_112068 0 0 1 SUPV3L1 POSTAR2 ENCODE chr16:29853067-29853122
64251 chr15 63597864 63597864 1 + C T SKCM 63597863 + 63597843 63597883 41 CTGGCGTCAGCATTTATAATCCTGGTGCTCATGGGCACCTG CTGGCGTCAGCATTTATAATCTTGGTGCTCATGGGCACCTG < 41bp 0.505218374987964 0.74304636044667 0.45146376 0.19192383 prediction 0.475655970917412 Functional Gain - APH1B ENSG00000138613 CDS Human protein_coding chr15:63597863 chr15:63597864 nonsynonymous SNV 0.937 0 22 hm5C_associated_SNPs_112070 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr15:63597835-63597865
64251 chr16 67859635 67859635 1 + C A THCA 67859634 + 67859614 67859654 41 ATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAA ATGACCCGGCAAGACCTGACCAGCACGCAGATGGAACTCAA < 41bp 0.517208632823982 0.755035767589006 0.03428912 0.0471825 prediction 0.475654269530047 Functional Gain - TSNAXIP1 ENSG00000102904 CDS Human protein_coding chr16:67859634 chr16:67859635 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_112072 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:67859614-67859652
64251 chr6 148854022 148854022 1 + C T UCEC 148854021 + 148854001 148854041 41 GATGACGAAGAGCCGCCTTACCGAGGCCCGTTCTGCGGGCG GATGACGAAGAGCCGCCTTACTGAGGCCCGTTCTGCGGGCG < 41bp 0.489328390454592 0.737822885470912 0.93171614 0.8855126 prediction 0.475645770941823 Functional Gain - SASH1 ENSG00000111961 CDS Human protein_coding chr6:148854021 chr6:148854022 stopgain 0.432 1 22 hm5C_associated_SNPs_112073 0 0 1 GRWD1 POSTAR2 ENCODE chr6:148853962-148854070
64251 chr2 28634919 28634919 1 + C T rs146012402 28634918 + 28634898 28634938 41 CCCAGTGTGCAAGATTAGCCCCGAGGAGCGCCGATCGCCCC CCCAGTGTGCAAGATTAGCCCTGAGGAGCGCCGATCGCCCC < 41bp 0.501114492696902 0.73891679007471 0.2797683 0.20468378 prediction 0.475604594755617 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28634918 chr2:28634919 synonymous SNV . 0 22 hm5C_associated_SNPs_112078 0 0 3 BUD13 POSTAR2 ENCODE chr2:28634847-28634991
64251 chr2 216177196 216177196 1 + T C rs182747429 216177194 + 216177174 216177214 41 CAGTGCAATGTGCTGCGAATCATGAGAAAAAATGTCTTCTC CAGTGCAATGTGCTGCGAATCACGAGAAAAAATGTCTTCTC < 41bp 0.491920952828885 0.737795536765803 0.4531621 0.40148127 prediction 0.475591073531606 Functional Gain - ATIC ENSG00000138363 UTR5 Human protein_coding chr2:216177194 chr2:216177196 . . 0 23 hm5C_associated_SNPs_112080 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:216177179-216177202
64251 chr12 12022535 12022535 1 + C T COAD 12022534 + 12022514 12022554 41 ACATGATCCGCCGCCTCTCCCCGGCTGAGAGAGCTCAGGGA ACATGATCCGCCGCCTCTCCCTGGCTGAGAGAGCTCAGGGA < 41bp 0.502633160395924 0.740427914165733 0.84948754 0.3505892 prediction 0.475589507539619 Functional Gain - ETV6 ENSG00000139083 CDS Human protein_coding chr12:12022534 chr12:12022535 nonsynonymous SNV 0.644 1 22 hm5C_associated_SNPs_112081 3 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:12022491-12022535
64251 chr1 179041129 179041129 1 + T C rs556474499 179041127 + 179041107 179041147 41 CCTTAAAATCTGCCATGGCCCATGACCCCATCTCCCCAGTG CCTTAAAATCTGCCATGGCCCACGACCCCATCTCCCCAGTG < 41bp 0.57488270177377 0.812674160621167 0.050417542 0.038427085 prediction 0.475582917694793 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179041127 chr1:179041129 synonymous SNV . 0 23 hm5C_associated_SNPs_112082 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:179041096-179041171
64251 chr3 5025009 5025009 1 + C T UCEC 5025008 + 5024988 5025028 41 GAACCCCCCACAAAAAAGAACCGGATGCAGCTTTCGGATGA GAACCCCCCACAAAAAAGAACTGGATGCAGCTTTCGGATGA < 41bp 0.536001735506166 0.773791254537077 0.5853001 0.446387 prediction 0.475579038061821 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025008 chr3:5025009 nonsynonymous SNV 0.851 4 22 hm5C_associated_SNPs_112086 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:5025000-5025027
64251 chr16 27709797 27709797 1 + C G rs61740297 27709796 + 27709776 27709816 41 GGCGCTCCTCAGCAGAAAGGCCGAGCAGCCAGCCAGCCCAC GGCGCTCCTCAGCAGAAAGGCGGAGCAGCCAGCCAGCCCAC < 41bp 0.421435114251064 0.737753329350379 0.21997634 0.8806966 prediction 0.475506658700759 Functional Gain - KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27709796 chr16:27709797 synonymous SNV . 0 22 hm5C_associated_SNPs_112097 0 0 2 PRPF8 POSTAR2 ENCODE chr16:27709778-27709869
64251 chr7 101961893 101961893 1 + C G rs553340752 101961889 + 101961869 101961909 41 TGCCTCGCCCTCCGACGCCGCCGGCGCCTCCTCGTCTTCCG TGCCTCGCCCTCCGACGCCGCCGGGGCCTCCTCGTCTTCCG < 41bp 0.575149441977448 0.81288879347419 0.10489586 0.600671 prediction 0.475478702993483 Functional Gain - SH2B2 ENSG00000160999 CDS Human protein_coding chr7:101961889 chr7:101961893 synonymous SNV . 0 25 hm5C_associated_SNPs_112099 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:101961871-101961908
64251 chr7 129348937 129348937 1 + C A LUAD 129348936 + 129348916 129348956 41 CCCAGCTTCGGGCATTTATCCCAGAGATGCTCAAGTACTCT CCCAGCTTCGGGCATTTATCCAAGAGATGCTCAAGTACTCT < 41bp 0.563298971608985 0.801026306632385 0.8588435 0.8882165 prediction 0.475454670046799 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129348936 chr7:129348937 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_112105 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378376 chr7:129348920-129348940
64251 chr10 15146061 15146061 1 + C A rs34040166 15146057 + 15146037 15146077 41 CCTAAGAGAAAGCTTGCTGACGGTCGGCAGGCTTCTGTAAC CCTAAGAGAAAGCTTGCTGACGGTAGGCAGGCTTCTGTAAC < 41bp 0.344709225467354 0.737708215621556 0.050777823 0.20466447 prediction 0.475416431243113 Functional Gain - RPP38 ENSG00000152464 CDS Human protein_coding chr10:15146057 chr10:15146061 synonymous SNV . 0 25 hm5C_associated_SNPs_112110 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:15146059-15146117
64251 chr17 18144975 18144975 1 + C T COAD 18144974 + 18144954 18144994 41 CAGGTGCACTATTCCTGCATCCGGAAGGAGGACATCAGCGG CAGGTGCACTATTCCTGCATCTGGAAGGAGGACATCAGCGG < 41bp 0.554795537842526 0.792500764121452 0.5273045 0.31196228 prediction 0.475410452557853 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18144974 chr17:18144975 nonsynonymous SNV 0.914 4 22 hm5C_associated_SNPs_112113 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:18144971-18144994
64251 chr19 36256067 36256067 1 + C T SKCM 36256066 + 36256046 36256086 41 CTCCAGCAAGGGCCTTGGCCCCAGGGCACCCGGTAAGGGCT CTCCAGCAAGGGCCTTGGCCCTAGGGCACCCGGTAAGGGCT < 41bp 0.505706860970683 0.743406491710916 0.368808 0.23019657 prediction 0.475399261480465 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256066 chr19:36256067 synonymous SNV . 0 22 hm5C_associated_SNPs_112116 0 0 1 PPIG POSTAR2 ENCODE chr19:36256023-36256081
64251 chr17 79673976 79673976 1 + A G GBM 79673973 + 79673953 79673993 41 CCCCATAGCGAAAGAACGGACACATTTCACCGTCCGCCTGA CCCCATAGCGAAAGAACGGACACGTTTCACCGTCCGCCTGA < 41bp 0.521037509003051 0.758727657734773 0.054025352 0.26326802 prediction 0.475380297463445 Functional Gain - MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79673973 chr17:79673976 nonsynonymous SNV 0.898 1 24 hm5C_associated_SNPs_112120 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:79673940-79673980
64251 chr20 44441322 44441322 1 + C G rs189025920 44441318 + 44441298 44441338 41 TTCTCCGAGTTCCTGTCTCTCTGCCAACGCCGCCCGGATGG TTCTCCGAGTTCCTGTCTCTCTGCGAACGCCGCCCGGATGG < 41bp 0.619869704465411 0.85755082123595 0.13266057 0.3867198 prediction 0.475362233541076 Functional Gain - UBE2C ENSG00000175063 UTR5 Human protein_coding chr20:44441318 chr20:44441322 . . 0 25 hm5C_associated_SNPs_112121 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:44441280-44441340
64251 chr16 28845928 28845928 1 + C G OV 28845924 + 28845904 28845944 41 GGCCCGCCTCTGGTGGCTGCCACGCCCTATTCTTCCTACAT GGCCCGCCTCTGGTGGCTGCCACGGCCTATTCTTCCTACAT < 41bp 0.455036955594212 0.737679617966379 0.07987404 0.27898037 prediction 0.475359235932759 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28845924 chr16:28845928 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_112123 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:28845901-28845933
64251 chr2 44066243 44066243 1 + C A rs72647316 44066239 + 44066219 44066259 41 AGGGCTGCCGAAAGGGGCCACTCCCCAGGATACCTCGGTGA AGGGCTGCCGAAAGGGGCCACTCCACAGGATACCTCGGTGA < 41bp 0.324740963049219 0.737673273072035 0.036462724 0.9475246 prediction 0.47534654614407 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44066239 chr2:44066243 synonymous SNV . 0 25 hm5C_associated_SNPs_112126 1 0 1 DDX3X POSTAR2 ENCODE chr2:44066136-44066253
64251 chr11 63962046 63962046 1 + C T UCEC 63962045 + 63962025 63962065 41 CTACTCAGTGATCCTACCTACCGGGAGCTGATAGAGCAGCT CTACTCAGTGATCCTACCTACTGGGAGCTGATAGAGCAGCT < 41bp 0.488284488333274 0.737670903909498 0.8536627 0.6354687 prediction 0.475341807818997 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63962045 chr11:63962046 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_112127 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr11:63962003-63962058
64251 chr14 55536406 55536406 1 + T G rs17128145 55536403 + 55536383 55536423 41 CTTTGCATGTGACCTGCATTCACTAAGGATATCTGGAAACC CTTTGCATGTGACCTGCATTCACGAAGGATATCTGGAAACC < 41bp 0.607399831372957 0.845066844736994 0.06061825 0.21126279 prediction 0.475334026728074 Functional Gain - MAPK1IP1L ENSG00000168175 UTR3 Human protein_coding chr14:55536403 chr14:55536406 . . 0 24 hm5C_associated_SNPs_112128 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr14:55536398-55536435
64251 chr4 2065772 2065772 1 + C A LUSC 2065768 + 2065748 2065788 41 GCGCCAGTGACCACTACGTGCTGCCGGGCATGACCCTCTCG GCGCCAGTGACCACTACGTGCTGCAGGGCATGACCCTCTCG < 41bp 0.33279317410799 0.737666360119241 0.06918967 0.09515104 prediction 0.475332720238481 Functional Gain - NAT8L ENSG00000185818 CDS Human protein_coding chr4:2065768 chr4:2065772 nonsynonymous SNV 0.989 3 25 hm5C_associated_SNPs_112129 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:2065756-2065779
64251 chr22 35820301 35820301 1 + C G rs185471383 35820297 + 35820277 35820317 41 TCGCCCACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGAC TCGCCCACGCCTCGCCCCTCCTGCGGCTGCCTGCCATTGAC < 41bp 0.513965510863774 0.751629719951076 0.1730003 0.30916423 prediction 0.475328418174605 Functional Gain - MCM5 ENSG00000100297 UTR3 Human protein_coding chr22:35820297 chr22:35820301 . . 0 25 hm5C_associated_SNPs_112130 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:35820247-35820351
64251 chr12 124221681 124221681 1 + C T SKCM 124221680 + 124221660 124221700 41 TCTGTCTACAGCCGTGTGATCCAGGTGAAGAAAATGAAGGC TCTGTCTACAGCCGTGTGATCTAGGTGAAGAAAATGAAGGC < 41bp 0.527086158713784 0.764749197603483 0.924407 0.68683255 prediction 0.475326077779399 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124221680 chr12:124221681 stopgain 0.904 1 22 hm5C_associated_SNPs_112132 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:124221663-124221690
64251 chr1 45101831 45101831 1 + C T LUSC 45101830 + 45101810 45101850 41 ACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACA ACTCTCCTGGAAGGTGGCTTCTGAGGTACAAGCAGCTGACA < 41bp 0.519285338036124 0.756946949400801 0.89242816 0.47094917 prediction 0.475323222729353 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45101830 chr1:45101831 stopgain 1.000 1 22 hm5C_associated_SNPs_112133 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:45101804-45101832
64251 chr13 37248176 37248176 1 + T G rs564505990 37248173 + 37248153 37248193 41 ATCCACTCCCGCTGCGCCTGCTGTCCGCCGTGCGCCCAGAC ATCCACTCCCGCTGCGCCTGCTGGCCGCCGTGCGCCCAGAC < 41bp 0.381651985351429 0.737642544430333 0.16440406 0.2678877 prediction 0.475285088860667 Functional Gain - SERTM1 ENSG00000180440 UTR5 Human protein_coding chr13:37248173 chr13:37248176 . . 0 24 hm5C_associated_SNPs_112136 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr13:37248176-37248177
64251 chrY 15028313 15028313 1 + C A HNSC 15028312 + 15028292 15028332 41 GATCGAGAGGAGGCCCTTCACCAGTTTCGCTCAGGAAAAAG GATCGAGAGGAGGCCCTTCACAAGTTTCGCTCAGGAAAAAG < 41bp 0.543349918430516 0.780991522535533 0.07404259 0.153586 prediction 0.475283208210035 Functional Gain - DDX3Y ENSG00000067048 CDS Human protein_coding chrY:15028312 chrY:15028313 nonsynonymous SNV 0.922 0 22 hm5C_associated_SNPs_112137 0 0 1 SRSF1 POSTAR2 ENCODE chrY:15028279-15028340
64251 chr16 2870998 2870998 1 + T C LIHC 2870996 + 2870976 2871016 41 CTCCAGGAAGTTCAGGTCGCCATCATAAACAACTCTATGTG CTCCAGGAAGTTCAGGTCGCCACCATAAACAACTCTATGTG < 41bp 0.462221799771491 0.737632365990918 0.05859363 0.14923322 prediction 0.475264731981835 Functional Gain - PRSS21 ENSG00000007038 CDS Human protein_coding chr16:2870996 chr16:2870998 nonsynonymous SNV 0.095 3 23 hm5C_associated_SNPs_112139 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:2870925-2871034
64251 chr17 40940793 40940793 1 + C A LUSC 40940792 + 40940772 40940812 41 TTGATCTGGATGGGGACAGCCCGGAAGAGATTGCAGCTGCC TTGATCTGGATGGGGACAGCCAGGAAGAGATTGCAGCTGCC < 41bp 0.482030132265435 0.737630653220528 0.45217365 0.88098943 prediction 0.475261306441057 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40940792 chr17:40940793 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112142 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:40940759-40940797
64251 chr13 28712689 28712689 1 + C G rs138028125 28712685 + 28712665 28712705 41 CGCAGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCA CGCAGCGGGACAGACCCACCCGCCGAGGCTTTTATCCGGCA < 41bp 0.466585128422996 0.737622890767765 0.10394472 0.3104697 prediction 0.475245781535531 Functional Gain - PAN3-AS1 ENSG00000152520 UTR5 Human protein_coding chr13:28712685 chr13:28712689 . . 0 25 hm5C_associated_SNPs_112144 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28712680-28712700
64251 chr13 32783101 32783101 1 + C A THCA 32783097 + 32783077 32783117 41 TGGTGGACAGCAGGCTCCTCCTCCCGGGGTCGAGCCCCAGC TGGTGGACAGCAGGCTCCTCCTCCAGGGGTCGAGCCCCAGC < 41bp 0.330011388785973 0.737611108402428 0.21940005 0.9410397 prediction 0.475222216804857 Functional Gain - FRY ENSG00000073910 CDS Human protein_coding chr13:32783097 chr13:32783101 nonsynonymous SNV 0.638 1 25 hm5C_associated_SNPs_112147 0 0 3 EIF3H POSTAR2 ENCODE chr13:32783080-32783186
64251 chr9 35800407 35800407 1 + T C UCEC 35800405 + 35800385 35800425 41 GGTGTAACTGGGCTGGTTGTCATGGACAAGAACAATGACCG GGTGTAACTGGGCTGGTTGTCACGGACAAGAACAATGACCG < 41bp 0.566367577290254 0.80397107787969 0.84221274 0.84764665 prediction 0.475207001178871 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35800405 chr9:35800407 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_112148 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:35800401-35800416
64251 chr17 46925443 46925443 1 + C T SKCM 46925442 + 46925422 46925462 41 GCAGGTGGGGTGGAAGACAACCCGTGAGTATTACACCTTCA GCAGGTGGGGTGGAAGACAACTCGTGAGTATTACACCTTCA < 41bp 0.533273801439921 0.77086702590174 0.12543535 0.17215377 prediction 0.475186448923637 Functional Gain - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46925442 chr17:46925443 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_112152 0 0 9 IGF2BP1 POSTAR2 ENCODE chr17:46925436-46925523
64251 chr19 18976574 18976574 1 + C T LUSC 18976573 + 18976553 18976593 41 GCCAGCCCGGCCTCTCCCAGCCGGAGCTGTCCCAGGTGAGC GCCAGCCCGGCCTCTCCCAGCTGGAGCTGTCCCAGGTGAGC < 41bp 0.529780667557628 0.767356329385559 0.40808013 0.2610228 prediction 0.47515132365586 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18976573 chr19:18976574 nonsynonymous SNV 0.952 2 22 hm5C_associated_SNPs_112153 0 0 2 RPS3 POSTAR2 ENCODE chr19:18976531-18976577
64251 chr17 38241000 38241000 1 + A G rs118191745 38240997 + 38240977 38241017 41 CTGAAGAGTGGGATCTGATCCACATTGCCACAGAGGCCCAT CTGAAGAGTGGGATCTGATCCACGTTGCCACAGAGGCCCAT < 41bp 0.493765814922667 0.737566041336436 0.32239294 0.79789543 prediction 0.475132082672872 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38240997 chr17:38241000 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_112159 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38240980-38241016
64251 chr16 84812715 84812715 1 + A G rs577643953 84812712 + 84812692 84812732 41 CTGTGTGCGCTGTGTGTGCGCCCAGTGCCCGCTTCGTAGGA CTGTGTGCGCTGTGTGTGCGCCCGGTGCCCGCTTCGTAGGA < 41bp 0.529586245353695 0.767149193165235 0.07511127 0.16956371 prediction 0.47512589562308 Functional Gain - USP10 ENSG00000103194 UTR3 Human protein_coding chr16:84812712 chr16:84812715 . . 0 24 hm5C_associated_SNPs_112160 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:84812680-84812722
64251 chr11 17388832 17388832 1 + C A rs11024269 17388828 + 17388808 17388848 41 TCTACCAGTGTGTGGTACGGCATGCGTCCTTGCATACCCCC TCTACCAGTGTGTGGTACGGCATGAGTCCTTGCATACCCCC < 41bp 0.329468504016661 0.737557755763375 0.5659859 0.4952037 prediction 0.47511551152675 Functional Gain - NCR3LG1 ENSG00000188211 CDS Human protein_coding chr11:17388828 chr11:17388832 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_112164 0 0 4 GRWD1 POSTAR2 ENCODE chr11:17388759-17388888
64251 chr7 141464283 141464283 1 + C G COAD 141464282 + 141464262 141464302 41 TGTCTTGGTGTCCTCTACTGCCTGAAAATCGCCAGTTTCTC TGTCTTGGTGTCCTCTACTGCGTGAAAATCGCCAGTTTCTC < 41bp 0.418482613441625 0.737553806239479 0.18665877 0.6073129 prediction 0.475107612478958 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464282 chr7:141464283 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_112167 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:141464263-141464285
64251 chr10 126662852 126662852 1 + C A UCEC 126662851 + 126662831 126662871 41 CGACTGTATGCACTTTGGAACCGGACTGCAGGAGACTGCCT CGACTGTATGCACTTTGGAACAGGACTGCAGGAGACTGCCT < 41bp 0.543985655340755 0.781535080867512 0.2652328 0.3990156 prediction 0.475098851053514 Functional Gain - ZRANB1 ENSG00000019995 CDS Human protein_coding chr10:126662851 chr10:126662852 synonymous SNV . 0 22 hm5C_associated_SNPs_112169 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr10:126662780-126662861
64251 chr3 183975378 183975378 1 + C T COAD 183975377 + 183975357 183975397 41 AGGCTCGCCATGCCCATGTGCCGCAGCTGCGCTGGGAGACC AGGCTCGCCATGCCCATGTGCTGCAGCTGCGCTGGGAGACC < 41bp 0.548023951287818 0.785566661832681 0.13792521 0.13657019 prediction 0.475085421089724 Functional Gain - ECE2 ENSG00000145194 CDS Human protein_coding chr3:183975377 chr3:183975378 nonsynonymous SNV 0.663 2 22 hm5C_associated_SNPs_112171 0 0 2 DDX3X POSTAR2 ENCODE chr3:183975358-183975497
64251 chr15 75094676 75094676 1 + T C STAD 75094674 + 75094654 75094694 41 GCCTCCCCCTGGCCACAGCCCCTGAAGGACGTCGTCCCTCG GCCTCCCCCTGGCCACAGCCCCCGAAGGACGTCGTCCCTCG < 41bp 0.477028883374731 0.737541785336573 0.27329373 0.29841325 prediction 0.475083570673146 Functional Gain - CSK ENSG00000103653 CDS Human protein_coding chr15:75094674 chr15:75094676 nonsynonymous SNV 0.998 5 23 hm5C_associated_SNPs_112172 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:75094676-75094677
64251 chr3 158364696 158364696 1 + C A LIHC 158364695 + 158364675 158364715 41 ACTTTTATTAACAAATTGGACCGAATGGGCTCCAACCCAGC ACTTTTATTAACAAATTGGACAGAATGGGCTCCAACCCAGC < 41bp 0.491811045871544 0.737541126891943 0.08685237 0.121771604 prediction 0.475082253783886 Functional Gain - GFM1 ENSG00000168827 CDS Human protein_coding chr3:158364695 chr3:158364696 synonymous SNV . 0 22 hm5C_associated_SNPs_112173 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:158364673-158364706
64251 chr11 111839270 111839270 1 + C T SKCM 111839269 + 111839249 111839289 41 TGAGTGGGGTACAGCTGAGTCCCGGTAACCAACAGGAGATG TGAGTGGGGTACAGCTGAGTCTCGGTAACCAACAGGAGATG < 41bp 0.483158695715706 0.737538911486999 0.38903594 0.22506002 prediction 0.475077822973997 Functional Gain - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111839269 chr11:111839270 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_112174 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:111839263-111839316
64251 chr5 67592129 67592129 1 + C T UCEC 67592128 + 67592108 67592148 41 CGAGATGGCACTTTTCTTGTCCGGGAGAGCAGTAAACAGGG CGAGATGGCACTTTTCTTGTCTGGGAGAGCAGTAAACAGGG < 41bp 0.505123202962481 0.742662048393495 0.71954715 0.44847167 prediction 0.475077690862027 Functional Gain - PIK3R1 ENSG00000145675 CDS Human protein_coding chr5:67592128 chr5:67592129 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_112175 2 0 1 GRWD1 POSTAR2 ENCODE chr5:67591998-67592174
64251 chr9 127975692 127975692 1 + C T SKCM 127975691 + 127975671 127975711 41 TACCTGCAAGGGCCTCTTGCCCCGGTATGAACATGCTAGCT TACCTGCAAGGGCCTCTTGCCTCGGTATGAACATGCTAGCT < 41bp 0.556246280451762 0.793783545189123 0.19153017 0.19780695 prediction 0.475074529474723 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127975691 chr9:127975692 synonymous SNV . 0 22 hm5C_associated_SNPs_112176 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr9:127975676-127975697
64251 chr16 20435364 20435364 1 + C A LUSC 20435363 + 20435343 20435383 41 CATTTTTGTGCATGAGCTGCCCCGAGTTGATGCCAAAGTTA CATTTTTGTGCATGAGCTGCCACGAGTTGATGCCAAAGTTA < 41bp 0.563545015437241 0.801082048057133 0.06346536 0.21215364 prediction 0.475074065239784 Functional Gain - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20435363 chr16:20435364 synonymous SNV . 0 22 hm5C_associated_SNPs_112177 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20435259-20435385
64251 chr14 100404167 100404167 1 + C A COAD 100404163 + 100404143 100404183 41 GCTTTTTGCAGGGGTTCCCTCTGCCTGTAAGCAAGTCGTAA GCTTTTTGCAGGGGTTCCCTCTGCATGTAAGCAAGTCGTAA < 41bp 0.31115136738263 0.73753560200969 0.4522095 0.8847819 prediction 0.475071204019381 Functional Gain - EML1 ENSG00000066629 CDS Human protein_coding chr14:100404163 chr14:100404167 synonymous SNV . 0 25 hm5C_associated_SNPs_112178 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:100404165-100404186
64251 chr19 14674655 14674655 1 + C T UCEC 14674654 + 14674634 14674674 41 GGATGTTCTGCAGAAGCTGCCCGTGGGCACCACGGCCACAC GGATGTTCTGCAGAAGCTGCCTGTGGGCACCACGGCCACAC < 41bp 0.516031914191422 0.753567474126722 0.426778 0.2547564 prediction 0.4750711198706 Functional Gain - TECR ENSG00000099797 CDS Human protein_coding chr19:14674654 chr19:14674655 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_112179 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:14674628-14674656
64251 chr6 26021046 26021046 1 + T C UCEC 26021044 + 26021024 26021064 41 GGGCTATTTGAGGACACTAACCTGTGCGCCATCCACGCCAA GGGCTATTTGAGGACACTAACCCGTGCGCCATCCACGCCAA < 41bp 0.510800252403908 0.748334011217104 0.19190666 0.29555717 prediction 0.475067517626392 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26021044 chr6:26021046 nonsynonymous SNV 0.960 1 23 hm5C_associated_SNPs_112180 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26020940-26021060
64251 chr19 39398083 39398083 1 + C A HNSC 39398082 + 39398062 39398102 41 CCTTCATTTGGCAGTGGAGGCCCAGGCAGCCGATGTGCTGG CCTTCATTTGGCAGTGGAGGCACAGGCAGCCGATGTGCTGG < 41bp 0.549545954078616 0.787074295343276 0.3317784 0.46377784 prediction 0.47505668252932 Functional Gain - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398082 chr19:39398083 synonymous SNV . 0 22 hm5C_associated_SNPs_112182 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:39398067-39398102
64251 chr12 117467283 117467283 1 + T G rs540604449 117467280 + 117467260 117467300 41 GGGGATGGGGCTGGGAGGGGCTGTGAGGGGCTGGCACCTCA GGGGATGGGGCTGGGAGGGGCTGGGAGGGGCTGGCACCTCA < 41bp 0.513125571695792 0.750644221870823 0.5581331 0.8917973 prediction 0.475037300350061 Functional Gain - FBXW8 ENSG00000174989 UTR3 Human protein_coding chr12:117467280 chr12:117467283 . . 0 24 hm5C_associated_SNPs_112184 0 0 2 UPF1 POSTAR2 ENCODE chr12:117467250-117467325
64251 chr8 27516866 27516866 1 + C T COAD 27516865 + 27516845 27516885 41 GCTGGGCTTCCACACCCATGCCGAGGAGCTCTACTACCTGA GCTGGGCTTCCACACCCATGCTGAGGAGCTCTACTACCTGA < 41bp 0.521864366777027 0.75937539611082 0.11854786 0.10236123 prediction 0.475022058667586 Functional Gain - SCARA3 ENSG00000168077 CDS Human protein_coding chr8:27516865 chr8:27516866 synonymous SNV . 0 22 hm5C_associated_SNPs_112185 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:27516760-27516922
64251 chr20 25207150 25207150 1 + C A UCEC 25207146 + 25207126 25207166 41 CTGAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCGGGC CTGAGCCACAGTCCCAGAACCAAGATCTCGGTGTCTCGGGC < 41bp 0.645634951489524 0.883143557482498 0.6346931 0.7052677 prediction 0.475017211985947 Functional Gain - ENTPD6 ENSG00000268302 CDS Human other chr20:25207146 chr20:25207150 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_112186 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:25207150-25207151
64251 chr11 121323176 121323176 1 + C G rs200826396 121323175 + 121323155 121323195 41 AGCGCGCCCTTGCCCCAGGACCGGGGCTTCCTCGTGGTGCA AGCGCGCCCTTGCCCCAGGACGGGGGCTTCCTCGTGGTGCA < 41bp 0.458698084792946 0.737502308363159 0.9051702 0.9224365 prediction 0.475004616726318 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121323175 chr11:121323176 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_112189 0 0 3 DDX3X POSTAR2 ENCODE chr11:121323175-121323235
64251 chr17 42979994 42979994 1 + C T SKCM 42979993 + 42979973 42980013 41 ACTGGGCGCTTCACCCTGAACCTAAGCCTGCTGAGCCGGGC ACTGGGCGCTTCACCCTGAACTTAAGCCTGCTGAGCCGGGC < 41bp 0.51608247839607 0.753581828832643 0.18790042 0.11890629 prediction 0.474998700873145 Functional Gain - CCDC103 ENSG00000167131 CDS Human protein_coding chr17:42979993 chr17:42979994 synonymous SNV . 0 22 hm5C_associated_SNPs_112191 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:42979994-42979995
64251 chr19 10224727 10224727 1 + C A PAAD 10224726 + 10224706 10224746 41 CCACCTGCGACCCAAGCACGCCTGGGCCGTGAGCGCTGCCG CCACCTGCGACCCAAGCACGCATGGGCCGTGAGCGCTGCCG < 41bp 0.560775489018206 0.798270444891467 0.19919151 0.39613926 prediction 0.474989911746522 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224726 chr19:10224727 synonymous SNV . 0 22 hm5C_associated_SNPs_112193 0 0 2 BUD13 POSTAR2 ENCODE chr19:10224702-10224753
64251 chr7 94292998 94292998 1 + C A LUAD 94292994 + 94292974 94293014 41 AAGCTCACAGAGGAGAACACCACCCTTCGAGAGCAAGTGGA AAGCTCACAGAGGAGAACACCACCATTCGAGAGCAAGTGGA < 41bp 0.305475356286217 0.737489453174506 0.13431406 0.25726843 prediction 0.474978906349013 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94292994 chr7:94292998 nonsynonymous SNV 0.011 1 25 hm5C_associated_SNPs_112196 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94292972-94293039
64251 chr1 182845222 182845222 1 + C T SKCM 182845221 + 182845201 182845241 41 TCTGTGGTGATGAATATGGTCCAGAAACAAGGTTGAGCATG TCTGTGGTGATGAATATGGTCTAGAAACAAGGTTGAGCATG < 41bp 0.512449397998226 0.749932587128442 0.015833467 0.08696255 prediction 0.474966378260431 Functional Gain - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182845221 chr1:182845222 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112199 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:182845208-182845367
64251 chr6 27114963 27114963 1 + C G LUSC 27114959 + 27114939 27114979 41 CTCGCGCCAAGGCCAAGACCCGCTCTTCTCGGGCTGGGCTT CTCGCGCCAAGGCCAAGACCCGCTGTTCTCGGGCTGGGCTT < 41bp 0.571977872060141 0.809439981904011 0.28938743 0.70760024 prediction 0.47492421968774 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27114959 chr6:27114963 nonsynonymous SNV 0.093 4 25 hm5C_associated_SNPs_112204 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27114880-27115000
64251 chr3 100071332 100071332 1 + C A rs112096266 100071331 + 100071311 100071351 41 TGTTGCCTGGGGACACAGCACCGTGGTGAACCCTTGGTGAG TGTTGCCTGGGGACACAGCACAGTGGTGAACCCTTGGTGAG < 41bp 0.545370354324367 0.782830083664875 0.18395442 0.23979917 prediction 0.474919458681015 Functional Gain - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100071331 chr3:100071332 synonymous SNV . 0 22 hm5C_associated_SNPs_112205 0 0 3 GRWD1 POSTAR2 ENCODE chr3:100071247-100071352
64251 chr16 50667441 50667441 1 + C T SKCM 50667440 + 50667420 50667460 41 TCCGCCCACCTGGCTGCCAGCCCGGCCCTCCTCCCCTCCCT TCCGCCCACCTGGCTGCCAGCTCGGCCCTCCTCCCCTCCCT < 41bp 0.515571986866318 0.753026774940656 0.2730038 0.38180026 prediction 0.474909576148676 Functional Gain - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50667440 chr16:50667441 nonsynonymous SNV 0.911 2 22 hm5C_associated_SNPs_112206 0 0 4 DDX59 POSTAR2 ENCODE chr16:50667387-50667452
64251 chr10 116603678 116603678 1 + T C STAD 116603676 + 116603656 116603696 41 GATCCGTTAGATATTGAAACCGTGGAAGCAATTAACTGGGG GATCCGTTAGATATTGAAACCGCGGAAGCAATTAACTGGGG < 41bp 0.569887685520589 0.807320091482812 0.36987925 0.3841753 prediction 0.474864811924447 Functional Gain - FAM160B1 ENSG00000151553 CDS Human protein_coding chr10:116603676 chr10:116603678 nonsynonymous SNV 0.976 1 23 hm5C_associated_SNPs_112214 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr10:116603646-116603684
64251 chr14 105905056 105905056 1 + A G UCEC 105905053 + 105905033 105905073 41 CCAGCAACCCATACCTGATCCGGAGAATCGAGGAGCTCAAC CCAGCAACCCATACCTGATCCGGGGAATCGAGGAGCTCAAC < 41bp 0.505923478944014 0.743351808887147 0.9369503 0.95531285 prediction 0.474856659886265 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105905053 chr14:105905056 nonsynonymous SNV 0.856 5 24 hm5C_associated_SNPs_112215 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:105904998-105905069
64251 chrX 48433658 48433658 1 + A G UCEC 48433655 + 48433635 48433675 41 GAAGACCACTTCAGCAGTTTCGGACCTATCTCTGAGGGTGA GAAGACCACTTCAGCAGTTTCGGGCCTATCTCTGAGGGTGA < 41bp 0.493459007251282 0.737426937564078 0.8352717 0.8992575 prediction 0.474853875128156 Functional Gain - RBM3 ENSG00000102317 CDS Human protein_coding chrX:48433655 chrX:48433658 synonymous SNV . 0 24 hm5C_associated_SNPs_112217 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48433558-48433660
64251 chr19 16192750 16192750 1 + C T UCEC 16192749 + 16192729 16192769 41 GGTGATGTGGCCGCCCTCAACCGACGCATCCAGCTCGTTGA GGTGATGTGGCCGCCCTCAACTGACGCATCCAGCTCGTTGA < 41bp 0.522764747906416 0.760184906158226 0.43740305 0.19019327 prediction 0.47484031650362 Functional Gain - TPM4 ENSG00000167460 CDS Human protein_coding chr19:16192749 chr19:16192750 stopgain 0.993 0 22 hm5C_associated_SNPs_112219 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16192733-16192791
64251 chr16 777598 777598 1 + T G COAD 777596 + 777576 777616 41 CGCGAGGCGGTGGCCGTGGACGTGGCTGTGCCCAAGAGGGT CGCGAGGCGGTGGCCGTGGACGGGGCTGTGCCCAAGAGGGT < 41bp 0.655841148359844 0.893257559579734 0.563496 0.90121305 prediction 0.47483282243978 Functional Gain - HAGHL ENSG00000103253 CDS Human protein_coding chr16:777596 chr16:777598 nonsynonymous SNV 0.976 2 23 hm5C_associated_SNPs_112221 0 0 1 DDX55 POSTAR2 ENCODE chr16:777549-777612
64251 chr5 54701366 54701366 1 + T A KIRC 54701362 + 54701342 54701382 41 TTTAAGAAGGTTGGGATTTGCTACTTCTTCTGATGTAATAG TTTAAGAAGGTTGGGATTTGCTACATCTTCTGATGTAATAG < 41bp 0.397489100541406 0.737412194772997 0.15473932 0.514654 prediction 0.474824389545994 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54701362 chr5:54701366 synonymous SNV . 0 25 hm5C_associated_SNPs_112222 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:54701325-54701410
64251 chr5 137520577 137520577 1 + C T GBM 137520576 + 137520556 137520596 41 CTACAGCTGGAGATGCATCTCCGAGATGAAATTTGCAATGA CTACAGCTGGAGATGCATCTCTGAGATGAAATTTGCAATGA < 41bp 0.543690414512146 0.781100358217461 0.6165129 0.4098617 prediction 0.474819887410631 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137520576 chr5:137520577 stopgain 0.999 1 22 hm5C_associated_SNPs_112224 0 0 5 GRWD1 POSTAR2 ENCODE chr5:137520541-137520615
64251 chr19 47879248 47879248 1 + T C COAD 47879246 + 47879226 47879266 41 GCTGCCAGCTCAGCCCAGGACCTGAGCCGCGAGCAGCTGGC GCTGCCAGCTCAGCCCAGGACCCGAGCCGCGAGCAGCTGGC < 41bp 0.456704646641302 0.737395271220522 0.2196478 0.409523 prediction 0.474790542441044 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47879246 chr19:47879248 nonsynonymous SNV 0.898 1 23 hm5C_associated_SNPs_112231 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47879217-47879256
64251 chr8 19171494 19171494 1 + C A rs549936185 19171490 + 19171470 19171510 41 CCGCCTCCACCCCTTCGCGGCGCCCGGGGCGGGCTCAGGTG CCGCCTCCACCCCTTCGCGGCGCCAGGGGCGGGCTCAGGTG < 41bp 0.387308395940661 0.737383231850065 0.31341857 0.4221887 prediction 0.47476646370013 Functional Gain - SH2D4A ENSG00000104611 UTR5 Human protein_coding chr8:19171490 chr8:19171494 . . 0 25 hm5C_associated_SNPs_112234 0 0 2 FAM120A POSTAR2 ENCODE chr8:19171396-19171557
64251 chr22 50278881 50278881 1 + C T PRAD 50278880 + 50278860 50278900 41 GTGCAAGTCTGGCAAACTCTCCGTATGCCACTTTGGCCTCT GTGCAAGTCTGGCAAACTCTCTGTATGCCACTTTGGCCTCT < 41bp 0.506518416812224 0.743898412925179 0.10166368 0.16740084 prediction 0.474759992225911 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50278880 chr22:50278881 nonsynonymous SNV 0.980 2 22 hm5C_associated_SNPs_112236 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr22:50278860-50278894
64251 chr15 66840798 66840798 1 + T G rs183222637 66840795 + 66840775 66840815 41 GGAGGAAGATCCTGAAGATTCTCTTATGAAGCTCCAAAATT GGAGGAAGATCCTGAAGATTCTCGTATGAAGCTCCAAAATT < 41bp 0.368053316200252 0.73737847638968 0.028272629 0.14290571 prediction 0.474756952779359 Functional Gain - LCTL;ZWILCH ENSG00000174442;ENSG00000188501 UTR3 Human other chr15:66840795 chr15:66840798 . . 0 24 hm5C_associated_SNPs_112237 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:66840771-66840799
64251 chr16 30964937 30964937 1 + C A STAD 30964936 + 30964916 30964956 41 CTCTGCGTCTGCAGCACCGTCCCAAGCTGAGCCAGCCTGCC CTCTGCGTCTGCAGCACCGTCACAAGCTGAGCCAGCCTGCC < 41bp 0.552975355955984 0.790352125674717 0.08042991 0.1191313 prediction 0.474753539437466 Functional Gain - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30964936 chr16:30964937 synonymous SNV . 0 22 hm5C_associated_SNPs_112238 0 0 1 SND1 POSTAR2 ENCODE chr16:30964905-30965031
64251 chr22 46202860 46202860 1 + C T UCEC 46202859 + 46202839 46202879 41 GTAAATGAGCTGGATGGTATCCCGTTGATCCTGGACAACTG GTAAATGAGCTGGATGGTATCTCGTTGATCCTGGACAACTG < 41bp 0.533555683706769 0.770931072436644 0.16886973 0.212183 prediction 0.474750777459751 Functional Gain - ATXN10 ENSG00000130638 CDS Human protein_coding chr22:46202859 chr22:46202860 nonsynonymous SNV 0.900 1 22 hm5C_associated_SNPs_112239 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:46202840-46202895
64251 chr4 57860953 57860953 1 + T C COAD 57860951 + 57860931 57860971 41 ACTTACTGCCTTTTGAATGGCTTGACAGATCGTGATCTTTG ACTTACTGCCTTTTGAATGGCTCGACAGATCGTGATCTTTG < 41bp 0.440866158842053 0.737368709169236 0.12195012 0.08871168 prediction 0.474737418338472 Functional Gain - POLR2B ENSG00000047315 CDS Human protein_coding chr4:57860951 chr4:57860953 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_112242 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:57860942-57860977
64251 chr3 12611711 12611711 1 + C T STAD 12611710 + 12611690 12611730 41 GAAAACTAACTCACATGAACCCGGAAAGCGTGAAAAGAGAA GAAAACTAACTCACATGAACCTGGAAAGCGTGAAAAGAGAA < 41bp 0.549736451423338 0.78709548404292 0.054167658 0.041561693 prediction 0.474718065239164 Functional Gain - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12611710 chr3:12611711 synonymous SNV . 0 22 hm5C_associated_SNPs_112244 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:12611672-12611734
64251 chr7 1026794 1026794 1 + C A LIHC 1026790 + 1026770 1026810 41 GAGGCCAACGCGGTGGCCTGCACCCTGGACATGGTCATGGC GAGGCCAACGCGGTGGCCTGCACCATGGACATGGTCATGGC < 41bp 0.316077879025051 0.737358679744823 0.2505894 0.24385652 prediction 0.474717359489645 Functional Gain - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1026790 chr7:1026794 nonsynonymous SNV 0.695 0 25 hm5C_associated_SNPs_112245 0 0 5 NOL12 POSTAR2 ENCODE chr7:1026783-1026816
64251 chr7 150741246 150741246 1 + C T SKCM 150741245 + 150741225 150741265 41 ACGGTGCTGGTAATTGCCCACCGGCTCAGCACTGTCCGTGG ACGGTGCTGGTAATTGCCCACTGGCTCAGCACTGTCCGTGG < 41bp 0.501049755728672 0.738407390732104 0.14298204 0.11992502 prediction 0.474715270006864 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150741245 chr7:150741246 nonsynonymous SNV 0.993 5 22 hm5C_associated_SNPs_112246 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:150741240-150741260
64251 chr3 87276522 87276522 1 + C A rs77328592 87276518 + 87276498 87276538 41 CGGTAGCTGCGGATACAAGCCTTCCGCGGGTCCTGCCTGGC CGGTAGCTGCGGATACAAGCCTTCAGCGGGTCCTGCCTGGC < 41bp 0.398845398833101 0.737344507378063 0.13131872 0.14210322 prediction 0.474689014756127 Functional Gain - CHMP2B ENSG00000083937 UTR5 Human protein_coding chr3:87276518 chr3:87276522 . . 0 25 hm5C_associated_SNPs_112249 1 0 13 CPSF3 POSTAR2 GSE37401,GSM917668 chr3:87276497-87276533
64251 chr3 32932943 32932943 1 + C T SKCM 32932942 + 32932922 32932962 41 TCTCTGGAAGCACTTTGACTCCCCACGGGGTGTGGCCTTCA TCTCTGGAAGCACTTTGACTCTCCACGGGGTGTGGCCTTCA < 41bp 0.568436234485256 0.805779767966889 0.18491271 0.9607284 prediction 0.474687066963265 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932942 chr3:32932943 synonymous SNV . 0 22 hm5C_associated_SNPs_112250 0 0 3 DDX6 POSTAR2 ENCODE chr3:32932912-32932958
64251 chr10 103906857 103906857 1 + C G SKCM 103906853 + 103906833 103906873 41 CAGGCAGATCCCTCAGCACCCTGCCTTGCCCCATCCAGCTT CAGGCAGATCCCTCAGCACCCTGCGTTGCCCCATCCAGCTT < 41bp 0.4356813878285 0.737340631429337 0.014671415 0.0459013 prediction 0.474681262858674 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906853 chr10:103906857 nonsynonymous SNV 0.699 0 25 hm5C_associated_SNPs_112251 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:103906856-103906857
64251 chr3 128077166 128077166 1 + T C STAD 128077164 + 128077144 128077184 41 TTGTCCACTGGGGAACTGGGCATCATCGACAGTGCCTTCGG TTGTCCACTGGGGAACTGGGCACCATCGACAGTGCCTTCGG < 41bp 0.468707054510596 0.737327627167511 0.4239887 0.36477077 prediction 0.474655254335022 Functional Gain - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:128077164 chr3:128077166 nonsynonymous SNV 0.510 0 23 hm5C_associated_SNPs_112252 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:128077156-128077183
64251 chr11 62439530 62439530 1 + T G rs143509965 62439528 + 62439508 62439548 41 GACCACGCAGGAGAACGTGGCCTGGAGGAAGAACTGGATGG GACCACGCAGGAGAACGTGGCCGGGAGGAAGAACTGGATGG < 41bp 0.392585817407028 0.737325951464166 0.1701839 0.44921455 prediction 0.474651902928332 Functional Gain - UQCC3 ENSG00000204922 CDS Human protein_coding chr11:62439528 chr11:62439530 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_112255 1 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr11:62439518-62439556
64251 chr22 45923763 45923763 1 + C T SKCM 45923762 + 45923742 45923782 41 TGTCTGCTGGGGAGGGCGGCCCAGGCCCAGGGCCAGAGCTG TGTCTGCTGGGGAGGGCGGCCTAGGCCCAGGGCCAGAGCTG < 41bp 0.491448151672341 0.737321513583044 0.85348403 0.73112965 prediction 0.474643027166088 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45923762 chr22:45923763 stopgain 0.976 0 22 hm5C_associated_SNPs_112256 0 0 4 RPS3 POSTAR2 ENCODE chr22:45923736-45923783
64251 chr19 58193542 58193542 1 + C G rs61734069 58193541 + 58193521 58193561 41 GTTGTGTTCGAATGCCCGCCCCGGTCGGCCGCCGCTCCCCG GTTGTGTTCGAATGCCCGCCCGGGTCGGCCGCCGCTCCCCG < 41bp 0.628626081135131 0.865942483756587 0.307284 0.8656974 prediction 0.474632805242912 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58193541 chr19:58193542 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_112258 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:58193532-58193559
64251 chr1 207868041 207868041 1 + T C LUAD 207868039 + 207868019 207868059 41 TTGGCATGAAAGGGCCCTCCCATGTGAAGTGCCAGGCCCTG TTGGCATGAAAGGGCCCTCCCACGTGAAGTGCCAGGCCCTG < 41bp 0.554039348242547 0.791351336918716 0.1391772 0.12821943 prediction 0.474623977352338 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207868039 chr1:207868041 synonymous SNV . 0 23 hm5C_associated_SNPs_112259 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:207868034-207868062
64251 chr1 44134855 44134855 1 + C T SKCM 44134854 + 44134834 44134874 41 GAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTCTG GAGTCAGAGTGAGCTCTTCCCTAAGGAGGATCTGAGTTCTG < 41bp 0.508979229669513 0.746290687405575 0.4713606 0.19307396 prediction 0.474622915472125 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134854 chr1:44134855 synonymous SNV . 0 22 hm5C_associated_SNPs_112260 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr2 120012355 120012355 1 + C T LUSC 120012354 + 120012334 120012374 41 GCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCAC GCTGGCCCTCGGCACGTTGTCTCTGCTGGCCGTGACCTCAC < 41bp 0.473005077129399 0.737301416778935 0.19387949 0.20731008 prediction 0.47460283355787 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120012354 chr2:120012355 synonymous SNV . 0 22 hm5C_associated_SNPs_112264 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:120012349-120012387
64251 chr17 7358653 7358653 1 + C T COAD 7358652 + 7358632 7358672 41 GCGTCTAAAAAGGCCCAAACCCGAGAGAGACCTGATGCCGG GCGTCTAAAAAGGCCCAAACCTGAGAGAGACCTGATGCCGG < 41bp 0.486931531318896 0.737278455521744 0.18162999 0.20160237 prediction 0.474556911043488 Functional Gain - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7358652 chr17:7358653 synonymous SNV . 0 22 hm5C_associated_SNPs_112272 0 0 1 SND1 POSTAR2 ENCODE chr17:7358638-7358776
64251 chr1 173446609 173446609 1 + T G UCEC 173446606 + 173446586 173446626 41 ATACCACCGTCGGCCGCATCCGTTTCCACGACTTTCTGGGA ATACCACCGTCGGCCGCATCCGTGTCCACGACTTTCTGGGA < 41bp 0.355739339333814 0.737276353175485 0.11710581 0.25657982 prediction 0.474552706350969 Functional Gain - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173446606 chr1:173446609 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_112273 0 0 16 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:173446582-173446615
64251 chr11 65631361 65631361 1 + C G rs34891773 65631360 + 65631340 65631380 41 AGCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTT AGCATCATCGACGGCCGCTTCGGGGAGCAGAAGGTAATTTT < 41bp 0.635180114915506 0.872456208948757 0.94419396 0.9374281 prediction 0.474552188066501 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631360 chr11:65631361 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_112274 0 0 6 GEMIN5 POSTAR2 ENCODE chr11:65631344-65631428
64251 chr2 162227688 162227688 1 + A G UCEC 162227685 + 162227665 162227705 41 ATGCCCTCTTTGTTTCAGGCCGGAGATGGTTGTTGGTTGGT ATGCCCTCTTTGTTTCAGGCCGGGGATGGTTGTTGGTTGGT < 41bp 0.50178552599884 0.739046869519307 0.6037053 0.7766826 prediction 0.474522687040933 Functional Gain - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162227685 chr2:162227688 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_112277 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:162227680-162227700
64251 chr7 29924036 29924036 1 + C A COAD 29924035 + 29924015 29924055 41 GCTCCCCGAGGGCTTCTTTGCCCGCGCCCCCTTTGCCAGGA GCTCCCCGAGGGCTTCTTTGCACGCGCCCCCTTTGCCAGGA < 41bp 0.565063492584766 0.802323898955786 0.32015675 0.3589675 prediction 0.474520812742039 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29924035 chr7:29924036 nonsynonymous SNV 0.013 2 22 hm5C_associated_SNPs_112278 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:29924015-29924056
64251 chr16 72132924 72132924 1 + C T LGG 72132923 + 72132903 72132943 41 GAAGACACTTGGGGTCCACCCCGCGTCTGTCCAGGGGCCGA GAAGACACTTGGGGTCCACCCTGCGTCTGTCCAGGGGCCGA < 41bp 0.520678035303373 0.757924833633937 0.635343 0.34426475 prediction 0.474493596661128 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72132923 chr16:72132924 nonsynonymous SNV 0.604 2 22 hm5C_associated_SNPs_112281 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:72132889-72132982
64251 chr2 108999931 108999931 1 + C T CESC 108999930 + 108999910 108999950 41 TGGGAAGCCAAAGACAAACACCGTATTCTCTATCTCTTCTA TGGGAAGCCAAAGACAAACACTGTATTCTCTATCTCTTCTA < 41bp 0.498530063092524 0.737230183460975 0.046078444 0.10917878 prediction 0.474460366921951 Functional Gain - SULT1C4 ENSG00000198075 CDS Human protein_coding chr2:108999930 chr2:108999931 nonsynonymous SNV 0.629 3 22 hm5C_associated_SNPs_112288 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:108999919-108999961
64251 chr1 109235181 109235181 1 + C A rs371226215 109235177 + 109235157 109235197 41 GATCGAGCTTGGCCCCCTCCCCCCCCTCCTTCCCTCCCTCC GATCGAGCTTGGCCCCCTCCCCCCACTCCTTCCCTCCCTCC < 41bp 0.363804218739071 0.737226867580085 0.06787625 0.1108537 prediction 0.474453735160171 Functional Gain - PRPF38B ENSG00000134186 UTR5 Human protein_coding chr1:109235177 chr1:109235181 . . 0 25 hm5C_associated_SNPs_112289 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:109235180-109235220
64251 chr3 42689514 42689514 1 + T A rs182189975 42689510 + 42689490 42689530 41 TTCAGGTTGTTGGCGGAATTCAGTTCTTTGCTGGCTCTCAG TTCAGGTTGTTGGCGGAATTCAGTACTTTGCTGGCTCTCAG < 41bp 0.486780785488369 0.737219712335607 0.6759875 0.771317 prediction 0.474439424671214 Functional Gain - LOC101928323 ENSG00000230084 ncRNA_intronic Human antisense chr3:42689510 chr3:42689514 . . 0 25 hm5C_associated_SNPs_112293 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:42689340-42689526
64251 chr1 36752630 36752630 1 + C A LUAD 36752626 + 36752606 36752646 41 GTGGTGAGGCGGCGGTCACCCCGTCCTAGCCCCGTGCCAAA GTGGTGAGGCGGCGGTCACCCCGTACTAGCCCCGTGCCAAA < 41bp 0.322205752717278 0.737214920144409 0.16344216 0.23897797 prediction 0.474429840288819 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752626 chr1:36752630 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_112296 0 0 7 FMR1 POSTAR2 ENCODE chr1:36752565-36752645
64251 chr17 4060358 4060358 1 + A G rs138389686 4060355 + 4060335 4060375 41 GGCTGCCCACCGCTAGCCATCACATGCTCCTTTCCACTCTA GGCTGCCCACCGCTAGCCATCACGTGCTCCTTTCCACTCTA < 41bp 0.511650080156217 0.748845634083352 0.04314956 0.12730828 prediction 0.474391107854269 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4060355 chr17:4060358 synonymous SNV . 0 24 hm5C_associated_SNPs_112302 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4060356-4060394
64251 chr5 167850748 167850748 1 + A G rs12054944 167850745 + 167850725 167850765 41 GGGGCCACCGGCTTCCGGCCCTCAGGCTGCATCACCACCAT GGGGCCACCGGCTTCCGGCCCTCGGGCTGCATCACCACCAT < 41bp 0.529673057788882 0.766867549183432 0.28015476 0.40890232 prediction 0.474388982789101 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850745 chr5:167850748 synonymous SNV . 0 24 hm5C_associated_SNPs_112303 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:167850732-167850764
64251 chr22 19119015 19119015 1 - A G STAD 19119017 - 19118997 19119037 41 ATCTTGACAGCCACATTGAACTTGAGGCGCTCAGAGTAGGC ATCTTGACAGCCACATTGAACTCGAGGCGCTCAGAGTAGGC < 41bp 0.513790381080766 0.750982174875648 0.117807746 0.21771118 prediction 0.474383587589763 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119017 chr22:19119015 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_112304 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19118953-19119023
64251 chr7 100771831 100771831 1 + C A LUAD 100771830 + 100771810 100771850 41 GTGGCGCAGGCCTCCAAGGACCGCAACGTGGTTTTCTCACC GTGGCGCAGGCCTCCAAGGACAGCAACGTGGTTTTCTCACC < 41bp 0.537585938897004 0.774760221316362 0.21899891 0.6994966 prediction 0.474348564838715 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100771830 chr7:100771831 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_112307 0 0 4 AUH POSTAR2 ENCODE chr7:100771780-100771831
64251 chr3 169496853 169496853 1 + C T SKCM 169496852 + 169496832 169496872 41 GAAGAAGAAGGCTTTCAACTCCCCGAAAACAGGGCAGAATA GAAGAAGAAGGCTTTCAACTCTCCGAAAACAGGGCAGAATA < 41bp 0.478718334494755 0.737166552389675 0.037208885 0.21545687 prediction 0.474333104779351 Functional Gain - MYNN ENSG00000085274 CDS Human protein_coding chr3:169496852 chr3:169496853 synonymous SNV . 0 22 hm5C_associated_SNPs_112312 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:169496840-169496860
64251 chr10 102753040 102753040 1 + T G UCEC 102753037 + 102753017 102753057 41 ATCTGCAGGTGTCCAAGAACCGCTTTGATGGAGATGTAGGT ATCTGCAGGTGTCCAAGAACCGCGTTGATGGAGATGTAGGT < 41bp 0.361993451846393 0.737162551939987 0.27623177 0.43613786 prediction 0.474325103879974 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102753037 chr10:102753040 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_112313 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr10:102752959-102753066
64251 chr22 50957762 50957762 1 + T C COAD 50957760 + 50957740 50957780 41 CCCGCAGCAGGTGGGACCCACATGGAGGCCTGCAGAACCTG CCCGCAGCAGGTGGGACCCACACGGAGGCCTGCAGAACCTG < 41bp 0.499623155909072 0.737151368508202 0.35594016 0.5432033 prediction 0.474302737016403 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957760 chr22:50957762 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_112316 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:50957744-50957823
64251 chr19 12848425 12848425 1 + A G STAD 12848422 + 12848402 12848442 41 TTAGCAACATCATCGAGCAGCGCAGCCTGAAGTGGATCTTC TTAGCAACATCATCGAGCAGCGCGGCCTGAAGTGGATCTTC < 41bp 0.507196850390023 0.744346327119586 0.19332728 0.2973897 prediction 0.474298953459127 Functional Gain - ASNA1 ENSG00000198356 CDS Human protein_coding chr19:12848422 chr19:12848425 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_112319 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:12848402-12848431
64251 chr20 33509186 33509186 1 + C A UCEC 33509185 + 33509165 33509205 41 CAGTGGGTGAACCCATCAACCCTGAGGCCTGGCTATGGTAC CAGTGGGTGAACCCATCAACCATGAGGCCTGGCTATGGTAC < 41bp 0.556778018666227 0.793920426955399 0.34030336 0.50181836 prediction 0.474284816578343 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33509185 chr20:33509186 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112323 0 0 1 PPIG POSTAR2 ENCODE chr20:33509174-33509245
64251 chr22 41605873 41605873 1 + C G COAD 41605869 + 41605849 41605889 41 TCGGGAAGCAGGGGAACTGCCGACCTCCCCGCTGCATTTGC TCGGGAAGCAGGGGAACTGCCGACGTCCCCGCTGCATTTGC < 41bp 0.449713353875454 0.737138005053504 0.27235943 0.77952635 prediction 0.474276010107008 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41605869 chr22:41605873 synonymous SNV . 0 25 hm5C_associated_SNPs_112324 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr22:41605862-41605893
64251 chr16 10837880 10837880 1 + C T COAD 10837879 + 10837859 10837899 41 TCATGTCAGGGATGCCCCAACCAGCGGCTGTGCGCTTCTGG TCATGTCAGGGATGCCCCAACTAGCGGCTGTGCGCTTCTGG < 41bp 0.506441193747568 0.743551739365244 0.7589054 0.2462351 prediction 0.474221091235353 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10837879 chr16:10837880 stopgain 0.997 1 22 hm5C_associated_SNPs_112329 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr16:10837879-10837880
64251 chr19 17973010 17973010 1 + C A STAD 17973006 + 17972986 17973026 41 CCGGGAATACCGGGACCTGACCACCGCAGGCGCTGTCACCC CCGGGAATACCGGGACCTGACCACAGCAGGCGCTGTCACCC < 41bp 0.313571983148731 0.737093892203706 0.20160621 0.17048818 prediction 0.474187784407411 Functional Gain - RPL18A ENSG00000105640 CDS Human protein_coding chr19:17973006 chr19:17973010 synonymous SNV . 0 25 hm5C_associated_SNPs_112335 0 0 2 METAP2 POSTAR2 ENCODE chr19:17972995-17973028
64251 chr2 99193584 99193584 1 + C T LUAD 99193583 + 99193563 99193603 41 ATGGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCATGCG ATGGCCCCGCAGGTCTTCACCTAGGCCCTGGAGTGCATGCG < 41bp 0.50288940133153 0.739971884864538 0.66207004 0.42436612 prediction 0.474164967066015 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99193583 chr2:99193584 stopgain 0.998 1 22 hm5C_associated_SNPs_112338 0 0 3 GRWD1 POSTAR2 ENCODE chr2:99193451-99193632
64251 chr12 52471038 52471038 1 + T A rs1283163 52471034 + 52471014 52471054 41 ACCTTGGCTTTTGGGAATTGCACTTTTGGGCCTTTGGGCTC ACCTTGGCTTTTGGGAATTGCACTATTGGGCCTTTGGGCTC < 41bp 0.423925874779386 0.737076483768192 0.12947354 0.10131988 prediction 0.474152967536383 Functional Gain - ATG101 ENSG00000257663 ncRNA_exonic Human antisense chr12:52471034 chr12:52471038 . . 0 25 hm5C_associated_SNPs_112339 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:52471002-52471062
64251 chr6 79944160 79944160 1 + C G rs576186797 79944159 + 79944139 79944179 41 GAGGAGCAAAGATTCCCAATCCCCGGGTTACTACCGCGCGC GAGGAGCAAAGATTCCCAATCGCCGGGTTACTACCGCGCGC < 41bp 0.625556508344402 0.862625217114969 0.2893204 0.8353042 prediction 0.474137417541133 Functional Gain - HMGN3-AS1 ENSG00000270362 ncRNA_exonic Human antisense chr6:79944159 chr6:79944160 . . 0 22 hm5C_associated_SNPs_112342 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr6:79944149-79944174
64251 chr11 34162049 34162049 1 + T C UCEC 34162047 + 34162027 34162067 41 GACTATCACCTCATCATGGACATGATCCCGGCCATCTCTCG GACTATCACCTCATCATGGACACGATCCCGGCCATCTCTCG < 41bp 0.44628054432396 0.737067303312089 0.059640944 0.021296233 prediction 0.474134606624177 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34162047 chr11:34162049 nonsynonymous SNV 0.539 2 23 hm5C_associated_SNPs_112344 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:34162029-34162057
64251 chr8 38034435 38034435 1 + C A COAD 38034431 + 38034411 38034451 41 CTACGGCCCCAGTGACGGTCCGTCCTACGGCCGCTACTACG CTACGGCCCCAGTGACGGTCCGTCATACGGCCGCTACTACG < 41bp 0.349769888670463 0.737065599958132 0.15290698 0.843006 prediction 0.474131199916264 Functional Gain - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38034431 chr8:38034435 synonymous SNV . 0 25 hm5C_associated_SNPs_112345 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:38034420-38034440
64251 chrX 100088333 100088333 1 + C T UCEC 100088332 + 100088312 100088352 41 GAGGCCCGTGCAATGGAAGTCCGAGGGATGGAGGCCAGAGG GAGGCCCGTGCAATGGAAGTCTGAGGGATGGAGGCCAGAGG < 41bp 0.515914968840403 0.752976014844419 0.6870899 0.43638578 prediction 0.474122092008032 Functional Gain - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100088332 chrX:100088333 stopgain 0.975 0 22 hm5C_associated_SNPs_112347 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:100088320-100088340
64251 chr1 161199707 161199707 1 + A G LUSC 161199704 + 161199684 161199724 41 GCCAGCAGGCCTAGCAACTTCGCATACAGAAACCTTTGGAG GCCAGCAGGCCTAGCAACTTCGCGTACAGAAACCTTTGGAG < 41bp 0.488617607831554 0.737051441294353 0.22549447 0.24162012 prediction 0.474102882588706 Functional Gain - NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199704 chr1:161199707 synonymous SNV . 0 24 hm5C_associated_SNPs_112349 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:161199691-161199707
64251 chr12 113629453 113629453 1 + C G HNSC 113629449 + 113629429 113629469 41 ATGTCCCCAGCACTGGTCATCCAGCCACCAGTGCCCCCCAC ATGTCCCCAGCACTGGTCATCCAGGCACCAGTGCCCCCCAC < 41bp 0.446489205098546 0.737042117855788 0.07966843 0.39406726 prediction 0.474084235711576 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113629449 chr12:113629453 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_112352 0 0 1 PCBP2 POSTAR2 ENCODE chr12:113629402-113629466
64251 chr19 1270972 1270972 1 + A G UCEC 1270969 + 1270949 1270989 41 GCAAACTTTTTGTTGGAGGGCTGAGTTTTGACACCAATGAG GCAAACTTTTTGTTGGAGGGCTGGGTTTTGACACCAATGAG < 41bp 0.515575924680789 0.752613770797704 0.26301053 0.35702258 prediction 0.474075692233831 Functional Gain - CIRBP ENSG00000099622 CDS Human protein_coding chr19:1270969 chr19:1270972 nonsynonymous SNV 0.887 3 24 hm5C_associated_SNPs_112353 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:1270930-1270983
64251 chr1 149858854 149858854 1 + T C CESC 149858852 + 149858832 149858872 41 TCGCCCAGGGCGGCGTTTTGCCTAACATCCAGGCCGTTCTG TCGCCCAGGGCGGCGTTTTGCCCAACATCCAGGCCGTTCTG < 41bp 0.491893318221591 0.73703750514805 0.10934582 0.32995448 prediction 0.4740750102961 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858852 chr1:149858854 synonymous SNV . 0 23 hm5C_associated_SNPs_112354 0 0 24 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:149858800-149858860
64251 chr16 28602162 28602162 1 + C T SKCM 28602161 + 28602141 28602181 41 AGGCCAACCCGGAGACGGACCCTGAGGCCTTGTTCCAGAAG AGGCCAACCCGGAGACGGACCTTGAGGCCTTGTTCCAGAAG < 41bp 0.561680100788442 0.798715124327582 0.17419854 0.1540393 prediction 0.47407004707828 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28602161 chr16:28602162 nonsynonymous SNV 0.108 2 22 hm5C_associated_SNPs_112356 0 0 1 PPIG POSTAR2 ENCODE chr16:28602093-28602174
64251 chr20 37168446 37168446 1 + C T UCEC 37168445 + 37168425 37168465 41 GTGATGGTTGACTCAGGAGACCGGAAGCGAGCCATCAGTTC GTGATGGTTGACTCAGGAGACTGGAAGCGAGCCATCAGTTC < 41bp 0.520592555287423 0.757622470103378 0.17700207 0.18171465 prediction 0.474059829631909 Functional Gain - RALGAPB ENSG00000170471 CDS Human protein_coding chr20:37168445 chr20:37168446 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112357 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:37168427-37168451
64251 chr11 62440960 62440960 1 + C G rs564351761 62440959 + 62440939 62440979 41 ATTTAGAAATGTAAAGTGGTCCCCAATCTCTGGATCTGGTC ATTTAGAAATGTAAAGTGGTCGCCAATCTCTGGATCTGGTC < 41bp 0.494853737389647 0.737019344336699 0.08446494 0.75591457 prediction 0.474038688673398 Functional Gain - UQCC3 ENSG00000204922 UTR3 Human protein_coding chr11:62440959 chr11:62440960 . . 0 22 hm5C_associated_SNPs_112360 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:62440946-62440986
64251 chr20 45354552 45354552 1 + C T SKCM 45354551 + 45354531 45354571 41 ACCGCCATGGGGCTGGTGGACCGTGCAGGCCGCAGGGCTCT ACCGCCATGGGGCTGGTGGACTGTGCAGGCCGCAGGGCTCT < 41bp 0.495276697435976 0.737010777981696 0.30679327 0.32833803 prediction 0.474021555963392 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354551 chr20:45354552 nonsynonymous SNV 0.957 5 22 hm5C_associated_SNPs_112362 0 0 3 DDX55 POSTAR2 ENCODE chr20:45354512-45354581
64251 chr10 12277056 12277056 1 + C T HNSC 12277055 + 12277035 12277075 41 TTTTGTTTACAGCTCGTTCTCCGAAAATGGTGTGAATTGAT TTTTGTTTACAGCTCGTTCTCTGAAAATGGTGTGAATTGAT < 41bp 0.496885660094085 0.737005350325413 0.37068233 0.074046016 prediction 0.474010700650826 Functional Gain - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12277055 chr10:12277056 stopgain 0.964 1 22 hm5C_associated_SNPs_112364 0 0 2 PUM2 POSTAR2 ENCODE chr10:12277046-12277056
64251 chr9 131584849 131584849 1 - G T COAD 131584850 - 131584830 131584870 41 ATGGCCTTGAGGCTGCCTGCCCGCGCCAGGATGTTTGGCAC ATGGCCTTGAGGCTGCCTGCCAGCGCCAGGATGTTTGGCAC < 41bp 0.547164759024762 0.784167173864821 0.14981076 0.31029263 prediction 0.474004829680119 Functional Gain - ENDOG ENSG00000167136 CDS Human protein_coding chr9:131584850 chr9:131584849 nonsynonymous SNV 0.273 3 22 hm5C_associated_SNPs_112365 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr9:131584849-131584850
64251 chr9 124521213 124521213 1 + C A rs147323804 124521209 + 124521189 124521229 41 TCAGGAAGCAAGTGCTTTTCCTGCCGGTCTGCAGCTGAGCG TCAGGAAGCAAGTGCTTTTCCTGCAGGTCTGCAGCTGAGCG < 41bp 0.308848580419586 0.736992800809586 0.12694004 0.17374605 prediction 0.473985601619171 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124521209 chr9:124521213 synonymous SNV . 0 25 hm5C_associated_SNPs_112368 0 0 4 BUD13 POSTAR2 ENCODE chr9:124521198-124521277
64251 chrX 47444706 47444706 1 + C T LUSC 47444705 + 47444685 47444725 41 TACTTCCACAGGTCCCACAACCGCAGCGAGGAGTTTCTCAT TACTTCCACAGGTCCCACAACTGCAGCGAGGAGTTTCTCAT < 41bp 0.539812174433496 0.776798258090468 0.059969723 0.043869287 prediction 0.473972167313943 Functional Gain - TIMP1 ENSG00000102265 CDS Human protein_coding chrX:47444705 chrX:47444706 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112371 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chrX:47444705-47444706
64251 chr7 129756485 129756485 1 + C T PRAD 129756484 + 129756464 129756504 41 GGCACAGATGGCTACATGCCCCGGGAATTGGCATCTATGTC GGCACAGATGGCTACATGCCCTGGGAATTGGCATCTATGTC < 41bp 0.505935479785707 0.742917454141424 0.3748842 0.04165569 prediction 0.473963948711434 Functional Gain - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129756484 chr7:129756485 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_112372 0 0 8 DDX24 POSTAR2 ENCODE chr7:129756396-129756505
64251 chr16 129531 129531 1 + C G rs2259275 129530 + 129510 129550 41 AGAGCAGCCACACAGCTCGTCCGATGCAGCCCAGGCACCTT AGAGCAGCCACACAGCTCGTCGGATGCAGCCCAGGCACCTT < 41bp 0.429762722475558 0.736975181202061 0.4343747 0.91619676 prediction 0.473950362404123 Functional Gain - MPG ENSG00000103152 CDS Human protein_coding chr16:129530 chr16:129531 synonymous SNV . 0 22 hm5C_associated_SNPs_112375 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:129524-129564
64251 chr15 85327056 85327056 1 + T G UCEC 85327054 + 85327034 85327074 41 AATCAAAACCATTAAGACATCATCAGGGGAAATCAAACGGA AATCAAAACCATTAAGACATCAGCAGGGGAAATCAAACGGA < 41bp 0.397012112214846 0.736954849563795 0.10408431 0.16469067 prediction 0.473909699127589 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85327054 chr15:85327056 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_112379 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:85327025-85327064
64251 chr7 138936723 138936723 1 + C T PAAD 138936722 + 138936702 138936742 41 GGTGGGAAACCCCGTAAACACCGGAAGGATCGGCTACAAGA GGTGGGAAACCCCGTAAACACTGGAAGGATCGGCTACAAGA < 41bp 0.501530678271403 0.738471847304837 0.25262392 0.17376003 prediction 0.473882338066868 Functional Gain - UBN2 ENSG00000157741 CDS Human protein_coding chr7:138936722 chr7:138936723 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112384 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr7:138936717-138936741
64251 chr2 207169561 207169561 1 + C A LIHC 207169560 + 207169540 207169580 41 GGTTGAGGATGAGGATGCTACCGAAGAGAGACCATCCGAGG GGTTGAGGATGAGGATGCTACAGAAGAGAGACCATCCGAGG < 41bp 0.530216767138466 0.767151194044388 0.26270583 0.15504494 prediction 0.473868853811843 Functional Gain - ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207169560 chr2:207169561 synonymous SNV . 0 22 hm5C_associated_SNPs_112388 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:207169526-207169566
64251 chr3 152150596 152150596 1 + C T SKCM 152150595 + 152150575 152150615 41 CCTGTTTCTCCAAGCCTGGTCCCGGCAGAGATCTTGCCGAC CCTGTTTCTCCAAGCCTGGTCTCGGCAGAGATCTTGCCGAC < 41bp 0.536672395456881 0.773602440723682 0.34136143 0.26874042 prediction 0.473860090533602 Functional Gain - MBNL1 ENSG00000152601 CDS Human protein_coding chr3:152150595 chr3:152150596 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112392 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr3:152150588-152150618
64251 chr2 172822974 172822974 1 + T C rs554545680 172822972 + 172822952 172822992 41 GGAGCTACGCTCTTTGCGACCGTAGGCTACATGACAGTCTA GGAGCTACGCTCTTTGCGACCGCAGGCTACATGACAGTCTA < 41bp 0.45723395464332 0.736911564442659 0.3080582 0.24647048 prediction 0.473823128885317 Functional Gain - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172822972 chr2:172822974 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_112400 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:172822960-172822997
64251 chr11 47317095 47317095 1 + C T UCEC 47317094 + 47317074 47317114 41 GTGAGTCCAGCTGTTATGATCCGCAGCTCAAGTCAGGATTC GTGAGTCCAGCTGTTATGATCTGCAGCTCAAGTCAGGATTC < 41bp 0.553374321431107 0.790257010507699 0.13257328 0.18789062 prediction 0.473765378153185 Functional Gain - MADD ENSG00000110514 CDS Human protein_coding chr11:47317094 chr11:47317095 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_112408 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:47317095-47317128
64251 chr2 219603187 219603187 1 + C T STAD 219603186 + 219603166 219603206 41 GGGGTACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAG GGGGTACTGGAGACTGTGCACTGCAGCCTGTTGACCATAAG < 41bp 0.484506269346862 0.736882568779144 0.11406985 0.1274572 prediction 0.473765137558289 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219603186 chr2:219603187 nonsynonymous SNV 0.042 0 22 hm5C_associated_SNPs_112411 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:219603159-219603201
64251 chr8 28908604 28908604 1 + C A LIHC 28908600 + 28908580 28908620 41 GCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATT GCTGTGGAAATGGCAGCAGTCAACAACACTATCTTGGCATT < 41bp 0.339852315563695 0.736877297095664 0.09449875 0.10464573 prediction 0.473754594191329 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28908600 chr8:28908604 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_112414 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:28908588-28908610
64251 chr6 167709567 167709567 1 + C T GBM 167709566 + 167709546 167709586 41 TGCTGGGACTCGGGGCCGCCCCGCTGTGGTCTGCACAGTGC TGCTGGGACTCGGGGCCGCCCTGCTGTGGTCTGCACAGTGC < 41bp 0.481788313335544 0.736874732680402 0.8384676 0.890725 prediction 0.473749465360804 Functional Gain - UNC93A ENSG00000112494 CDS Human protein_coding chr6:167709566 chr6:167709567 nonsynonymous SNV 0.266 2 22 hm5C_associated_SNPs_112415 0 0 3 BUD13 POSTAR2 ENCODE chr6:167709505-167709586
64251 chr10 89311913 89311913 1 + T C UCEC 89311911 + 89311891 89311931 41 CTTCTTCCACTGCTTTCTCTCATGGGCTACTTCAAAGACAA CTTCTTCCACTGCTTTCTCTCACGGGCTACTTCAAAGACAA < 41bp 0.469240971779391 0.736864631005343 0.9168966 0.82775533 prediction 0.473729262010685 Functional Gain - MINPP1 ENSG00000107789 CDS Human protein_coding chr10:89311911 chr10:89311913 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_112417 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:89311873-89311921
64251 chr19 37619288 37619288 1 + T C STAD 37619286 + 37619266 37619306 41 GTGGCTCAGAACTTACTCAACATGAGCGAATTCACACAGGT GTGGCTCAGAACTTACTCAACACGAGCGAATTCACACAGGT < 41bp 0.575628764311591 0.812490958538326 0.115100354 0.20414764 prediction 0.473724388453469 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37619286 chr19:37619288 synonymous SNV . 0 23 hm5C_associated_SNPs_112419 0 0 1 DGCR8 POSTAR2 ENCODE chr19:37619261-37619298
64251 chr4 37831699 37831699 1 + T A BLCA 37831695 + 37831675 37831715 41 TGGGACAGCTGGCCTCCGAGCTGCTATGGGACCTGGAATTT TGGGACAGCTGGCCTCCGAGCTGCAATGGGACCTGGAATTT < 41bp 0.654341087947948 0.891198426440665 0.11654824 0.1650883 prediction 0.473714676985435 Functional Gain - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37831695 chr4:37831699 synonymous SNV . 0 25 hm5C_associated_SNPs_112421 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr4:37831694-37831715
64251 chr3 142840366 142840366 1 + C A UCEC 142840365 + 142840345 142840385 41 TGTCTTCCAGTTGTATAGCCCCGCGGGCAGCGGGGGGCGCA TGTCTTCCAGTTGTATAGCCCAGCGGGCAGCGGGGGGCGCA < 41bp 0.557589191007554 0.794442297361855 0.46982294 0.7428577 prediction 0.473706212708602 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840365 chr3:142840366 synonymous SNV . 0 22 hm5C_associated_SNPs_112423 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:142840341-142840393
64251 chr5 61887445 61887445 1 + T G COAD 61887442 + 61887422 61887462 41 CTGTGGGATTATAAACATTTCAGTAGAAGGCCTGCATGATG CTGTGGGATTATAAACATTTCAGGAGAAGGCCTGCATGATG < 41bp 0.47323578893237 0.736848483198697 0.15696794 0.5248911 prediction 0.473696966397394 Functional Gain - IPO11 ENSG00000086200 CDS Human protein_coding chr5:61887442 chr5:61887445 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_112425 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:61887414-61887447
64251 chr8 48878827 48878827 1 + C T SKCM 48878826 + 48878806 48878846 41 GAGATGCAGGAGGCCTTCTTCCAGTGCCAAGTGTGTGCCCA GAGATGCAGGAGGCCTTCTTCTAGTGCCAAGTGTGTGCCCA < 41bp 0.545752085273027 0.782597635075481 0.42946938 0.43732283 prediction 0.473691099604908 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878826 chr8:48878827 stopgain 0.999 1 22 hm5C_associated_SNPs_112427 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:48878772-48878827
64251 chr19 15763689 15763689 1 + C A COAD 15763688 + 15763668 15763708 41 CTGTACCACCTTGCAAAGCACCCGGAATACCAGGAGCGCTG CTGTACCACCTTGCAAAGCACACGGAATACCAGGAGCGCTG < 41bp 0.57562500761871 0.812468959957484 0.26417536 0.19328716 prediction 0.473687904677548 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15763688 chr19:15763689 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_112428 0 0 3 GRWD1 POSTAR2 ENCODE chr19:15763668-15763734
64251 chr6 96034656 96034656 1 + C T SKCM 96034655 + 96034635 96034675 41 ATTACAGTTGGTATGGAAATCCACAATTTGATGGTAAATAT ATTACAGTTGGTATGGAAATCTACAATTTGATGGTAAATAT < 41bp 0.492385808490905 0.736823292733775 0.045525193 0.7624459 prediction 0.47364658546755 Functional Gain - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034655 chr6:96034656 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112433 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:96034647-96034673
64251 chr6 35260699 35260699 1 + C T STAD 35260698 + 35260678 35260718 41 AGTCCGCCACCCAAACGACCCCGGATAGCTTACCTTTCGGA AGTCCGCCACCCAAACGACCCTGGATAGCTTACCTTTCGGA < 41bp 0.532845016670264 0.769660467257127 0.46795648 0.58643615 prediction 0.473630901173726 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35260698 chr6:35260699 nonsynonymous SNV 0.474 1 22 hm5C_associated_SNPs_112435 0 0 2 PPIG POSTAR2 ENCODE chr6:35260673-35260822
64251 chr2 183595807 183595807 1 + C G rs566811915 183595803 + 183595783 183595823 41 GCTTTTGCTGCTGGTATTGGCTGGCTGATCACTTTTTGTTC GCTTTTGCTGCTGGTATTGGCTGGGTGATCACTTTTTGTTC < 41bp 0.464227169310156 0.736814877128133 0.39835465 0.7417437 prediction 0.473629754256266 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183595803 chr2:183595807 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_112436 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:183595796-183595812
64251 chr14 65499349 65499349 1 + C G COAD 65499348 + 65499328 65499368 41 AAGCGCATACTGTGCTGCCTCCGTAGCCTCGCTGACCAACA AAGCGCATACTGTGCTGCCTCGGTAGCCTCGCTGACCAACA < 41bp 0.411483057777446 0.736809224617489 0.08159077 0.1436128 prediction 0.473618449234979 Functional Gain - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65499348 chr14:65499349 synonymous SNV . 0 22 hm5C_associated_SNPs_112439 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr14:65499335-65499367
64251 chr12 113376331 113376331 1 + C A rs1859331 113376327 + 113376307 113376347 41 GCTTCCCCTTGCACCTGCGCCGGGCGGCCATGGACTTGTAC GCTTCCCCTTGCACCTGCGCCGGGAGGCCATGGACTTGTAC < 41bp 0.572150320445728 0.808956308295635 0.82592624 0.85607034 prediction 0.473611975699813 Functional Gain - OAS3 ENSG00000257452 ncRNA_intronic Human antisense chr12:113376327 chr12:113376331 . . 0 25 hm5C_associated_SNPs_112440 0 0 1 DDX3X POSTAR2 ENCODE chr12:113376312-113376377
64251 chr2 11300636 11300636 1 + C T GBM 11300635 + 11300615 11300655 41 AGTGTTACTATGGGTATCCGCCGCTGACCTACCTGGAGTAC AGTGTTACTATGGGTATCCGCTGCTGACCTACCTGGAGTAC < 41bp 0.531490955499758 0.768288932358398 0.40372357 0.34320843 prediction 0.473595953717281 Functional Gain - PQLC3 ENSG00000162976 CDS Human protein_coding chr2:11300635 chr2:11300636 nonsynonymous SNV 0.753 1 22 hm5C_associated_SNPs_112443 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:11300618-11300659
64251 chr16 20787326 20787326 1 + A G PAAD 20787323 + 20787303 20787343 41 ATCGGGTAATTCTGATTCTGCCCAGGGTCCCAGAGTGGTGG ATCGGGTAATTCTGATTCTGCCCGGGGTCCCAGAGTGGTGG < 41bp 0.489843829325373 0.736794404854265 0.0722858 0.33368915 prediction 0.473588809708529 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20787323 chr16:20787326 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_112444 0 0 5 IGF2BP1 POSTAR2 ENCODE chr16:20787240-20787355
64251 chr2 219614783 219614783 1 + T C STAD 219614781 + 219614761 219614801 41 GCATCAAAGGCCAGATGATTCGTGACCTTCTGAATCTGGCA GCATCAAAGGCCAGATGATTCGCGACCTTCTGAATCTGGCA < 41bp 0.599171794898899 0.835962292656009 0.059530526 0.17421418 prediction 0.473580995514219 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219614781 chr2:219614783 synonymous SNV . 0 23 hm5C_associated_SNPs_112446 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr2:219614779-219614792
64251 chr1 156704172 156704172 1 + T C UCEC 156704170 + 156704150 156704190 41 TACAGAAAGCTGGCCCTGGCCTTCGAACTCACTGCTACCGT TACAGAAAGCTGGCCCTGGCCTCCGAACTCACTGCTACCGT < 41bp 0.453624214355965 0.736788984148124 0.056456 0.469769 prediction 0.473577968296248 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156704170 chr1:156704172 synonymous SNV . 0 23 hm5C_associated_SNPs_112448 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:156704152-156704179
64251 chr13 51826252 51826252 1 + T C UCEC 51826250 + 51826230 51826270 41 GTGAGGGACATAGGCGAGCTCGTGCCTCTCCTGCCCAACCC GTGAGGGACATAGGCGAGCTCGCGCCTCTCCTGCCCAACCC < 41bp 0.56964251285972 0.806430081312918 0.671033 0.64840573 prediction 0.473575136906396 Functional Gain - FAM124A ENSG00000150510 CDS Human protein_coding chr13:51826250 chr13:51826252 nonsynonymous SNV 0.945 3 23 hm5C_associated_SNPs_112449 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:51826238-51826276
64251 chr2 231742238 231742238 1 + C T LUAD 231742237 + 231742217 231742257 41 TGCAACGGGAAAGACACCTACCGGCTCCGGCGCCGGGCAAC TGCAACGGGAAAGACACCTACTGGCTCCGGCGCCGGGCAAC < 41bp 0.515152376631973 0.751938671823746 0.63601637 0.6363332 prediction 0.473572590383548 Functional Gain - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231742237 chr2:231742238 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_112450 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:231742220-231742245
64251 chr13 37580078 37580078 1 + C A rs117135638 37580077 + 37580057 37580097 41 TTCCTAATGTGGATCTACCACCCCTGTGTTCATCGAGATTC TTCCTAATGTGGATCTACCACACCTGTGTTCATCGAGATTC < 41bp 0.549907114833033 0.786692109619508 0.0793179 0.097616315 prediction 0.47356998957295 Functional Gain - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37580077 chr13:37580078 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_112451 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:37580059-37580084
64251 chr16 71954702 71954702 1 + C T UCEC 71954701 + 71954681 71954721 41 GGCAAGCTATGTAGGACCAACCAGATTGGAACTGTGAATGA GGCAAGCTATGTAGGACCAACTAGATTGGAACTGTGAATGA < 41bp 0.555206513369003 0.791979279983929 0.32315218 0.47811055 prediction 0.473545533229853 Functional Gain - IST1 ENSG00000182149 CDS Human protein_coding chr16:71954701 chr16:71954702 stopgain 0.998 1 22 hm5C_associated_SNPs_112456 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:71954670-71954728
64251 chr2 131130764 131130764 1 + C T KIRP 131130763 + 131130743 131130783 41 CATTGGGAGGCCGAAGGGTCCCCGGGACCCGCCTGCTGAGT CATTGGGAGGCCGAAGGGTCCTCGGGACCCGCCTGCTGAGT < 41bp 0.503428890682659 0.740201377004094 0.35478166 0.22316667 prediction 0.473544972642869 Functional Gain - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131130763 chr2:131130764 synonymous SNV . 0 22 hm5C_associated_SNPs_112457 0 0 3 DDX3X POSTAR2 ENCODE chr2:131130740-131130786
64251 chr6 26156568 26156568 1 + C G rs548197778 26156567 + 26156547 26156587 41 CGCCGCGGCTCGAGTCCCGGCCAGTGCCTCTGCTTCCGGCT CGCCGCGGCTCGAGTCCCGGCGAGTGCCTCTGCTTCCGGCT < 41bp 0.433256739990877 0.736765260568492 0.049551845 0.3429888 prediction 0.473530521136985 Functional Gain - HIST1H1E ENSG00000168298 UTR5 Human protein_coding chr6:26156567 chr6:26156568 . . 0 22 hm5C_associated_SNPs_112460 0 0 40 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:26156540-26156700
64251 chr5 43175067 43175067 1 + C A LUSC 43175066 + 43175046 43175086 41 AGCAGATTTGGACCACGTGACCCCAGAAATCATGAACCAAG AGCAGATTTGGACCACGTGACACCAGAAATCATGAACCAAG < 41bp 0.489467841758158 0.736762925874582 0.09943488 0.0576002 prediction 0.473525851749165 Functional Gain - ZNF131 ENSG00000172262 CDS Human protein_coding chr5:43175066 chr5:43175067 synonymous SNV . 0 22 hm5C_associated_SNPs_112461 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:43175035-43175071
64251 chr22 35661227 35661227 1 + T C rs141856411 35661225 + 35661205 35661245 41 CAGAGTCCCACAGTGCTAACCTTGATCTTTCAGGGCTTGAA CAGAGTCCCACAGTGCTAACCTCGATCTTTCAGGGCTTGAA < 41bp 0.616396845913565 0.85315884987561 0.020868808 0.7396236 prediction 0.473524007924088 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661225 chr22:35661227 synonymous SNV . 0 23 hm5C_associated_SNPs_112462 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:35661206-35661231
64251 chr8 25232157 25232157 1 + C A UCEC 25232153 + 25232133 25232173 41 CTGCCTACACGCTTCTCTTGCACGCTGAGCTTCTGCAGGTG CTGCCTACACGCTTCTCTTGCACGATGAGCTTCTGCAGGTG < 41bp 0.350822387173417 0.73674328131376 0.2170263 0.21405599 prediction 0.473486562627521 Functional Gain - DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25232153 chr8:25232157 nonsynonymous SNV 0.515 4 25 hm5C_associated_SNPs_112467 0 0 1 PRPF8 POSTAR2 ENCODE chr8:25232152-25232202
64251 chr10 99211925 99211925 1 + C T OV 99211924 + 99211904 99211944 41 TGTGTCCTGCCTCTCATCCTCCGAACCTACTCAGTGCCACG TGTGTCCTGCCTCTCATCCTCTGAACCTACTCAGTGCCACG < 41bp 0.49304620729136 0.736741557137398 0.27321094 0.38337556 prediction 0.473483114274795 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211924 chr10:99211925 stopgain 1.000 0 22 hm5C_associated_SNPs_112468 0 0 2 LIN28B POSTAR2 GSE44616,GSM1087851 chr10:99211903-99211926
64251 chr3 24003595 24003595 1 + T C UCEC 24003593 + 24003573 24003613 41 AAAATGACACATTAGTAGAACATCATGAACAGACAGCCTTG AAAATGACACATTAGTAGAACACCATGAACAGACAGCCTTG < 41bp 0.467291248705337 0.736740439458125 0.07175097 0.051350147 prediction 0.473480878916251 Functional Gain - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:24003593 chr3:24003595 synonymous SNV . 0 23 hm5C_associated_SNPs_112469 0 0 15 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:24003560-24003620
64251 chr6 3015827 3015827 1 + C T SKCM 3015826 + 3015806 3015846 41 TGGATGGATAGGGTGCTGTGCCAGGGCTTTGCCTTTGACAT TGGATGGATAGGGTGCTGTGCTAGGGCTTTGCCTTTGACAT < 41bp 0.497096250215588 0.736737647039429 0.84938604 0.4344467 prediction 0.473475294078858 Functional Gain - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015826 chr6:3015827 stopgain 0.513 0 22 hm5C_associated_SNPs_112472 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:3015799-3015857
64251 chr1 229770818 229770818 1 + T A LGG 229770814 + 229770794 229770834 41 TGATGGTGGCCTTGCTGAGCCAGCTTTGCTGGTCGGCCTGC TGATGGTGGCCTTGCTGAGCCAGCATTGCTGGTCGGCCTGC < 41bp 0.637168462104356 0.873899760691648 0.57797223 0.74580705 prediction 0.473462597174584 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770814 chr1:229770818 nonsynonymous SNV 0.854 4 25 hm5C_associated_SNPs_112473 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:229770800-229770820
64251 chr11 111845669 111845669 1 + A G COAD 111845666 + 111845646 111845686 41 CGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCCCC CGGGCCCTAGTGCAGCAGTACGAGGGGCAACAAAGGTCCCC < 41bp 0.51238812361578 0.749117926133458 0.576103 0.89560515 prediction 0.473459605035356 Functional Gain - DIXDC1 ENSG00000150764 CDS Human protein_coding chr11:111845666 chr11:111845669 synonymous SNV . 0 24 hm5C_associated_SNPs_112475 0 0 2 BUD13 POSTAR2 ENCODE chr11:111845633-111845711
64251 chr3 49060342 49060342 1 + A G COAD 49060339 + 49060319 49060359 41 GGTGGGGACTGGAGACCGGACCGAGAGGCTGCAGTCCCAGG GGTGGGGACTGGAGACCGGACCGGGAGGCTGCAGTCCCAGG < 41bp 0.514454635313946 0.75117696229448 0.3718546 0.8785991 prediction 0.473444653961068 Functional Gain - NDUFAF3 ENSG00000178057 CDS Human protein_coding chr3:49060339 chr3:49060342 nonsynonymous SNV 0.754 1 24 hm5C_associated_SNPs_112478 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:49060286-49060391
64251 chr20 13098238 13098238 1 + A G UCEC 13098235 + 13098215 13098255 41 ACCTCTACATAGATGAAGCTCACAGTATTGGGGCCGTGGGC ACCTCTACATAGATGAAGCTCACGGTATTGGGGCCGTGGGC < 41bp 0.490629093225242 0.736713638303941 0.24423489 0.43219364 prediction 0.473427276607882 Functional Gain - SPTLC3 ENSG00000172296 CDS Human protein_coding chr20:13098235 chr20:13098238 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_112483 0 0 1 SND1 POSTAR2 ENCODE chr20:13098237-13098285
64251 chr5 137803300 137803300 1 + C T UCEC 137803299 + 137803279 137803319 41 GACCACCTCACCACCCACATCCGCACCCACACAGGCGAAAA GACCACCTCACCACCCACATCTGCACCCACACAGGCGAAAA < 41bp 0.483462198599285 0.736707779100394 0.11727163 0.16762105 prediction 0.473415558200788 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803299 chr5:137803300 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112485 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:137803274-137803301
64251 chr1 203025937 203025937 1 + C A LUSC 203025936 + 203025916 203025956 41 TTGGAGGATCAGGGCAGCAACCCCAGCAGCAGCAACAGCAG TTGGAGGATCAGGGCAGCAACACCAGCAGCAGCAACAGCAG < 41bp 0.536536943080314 0.773230446226073 0.4592768 0.45894378 prediction 0.473387006291518 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203025936 chr1:203025937 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112489 0 0 2 ZNF622 POSTAR2 ENCODE chr1:203025928-203025957
64251 chr22 38270460 38270460 1 + C T HNSC 38270459 + 38270439 38270479 41 TTCAGCCTGGTCGGGCTTCTCCGCCTGCACTCCCTGTTAGG TTCAGCCTGGTCGGGCTTCTCTGCCTGCACTCCCTGTTAGG < 41bp 0.477314315002217 0.736689255452145 0.1686464 0.11166769 prediction 0.47337851090429 Functional Gain - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38270459 chr22:38270460 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_112491 0 0 29 LIN28A POSTAR2 GSE39873,GSM980594 chr22:38270420-38270460
64251 chr11 10328160 10328160 1 + C A ACC 10328159 + 10328139 10328179 41 CACACGGGGCTCCAGCCCCCCCGAGTGGAAGTGCTCCCCAC CACACGGGGCTCCAGCCCCCCAGAGTGGAAGTGCTCCCCAC < 41bp 0.554449165923662 0.791130559296151 0.20111555 0.6643756 prediction 0.473362786744978 Functional Gain - ADM ENSG00000148926 CDS Human protein_coding chr11:10328159 chr11:10328160 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_112493 0 0 1 SND1 POSTAR2 ENCODE chr11:10328039-10328162
64251 chr1 29069444 29069444 1 + T C GBM 29069442 + 29069422 29069462 41 GGGTCCATTACTAGTAACATCGTGGCTTCCAATAGTTTGCC GGGTCCATTACTAGTAACATCGCGGCTTCCAATAGTTTGCC < 41bp 0.565354752136726 0.802034931220204 0.12520349 0.17080039 prediction 0.473360358166957 Functional Gain - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069442 chr1:29069444 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_112494 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:29069427-29069451
64251 chr3 9804662 9804662 1 - A T PRAD 9804666 - 9804646 9804686 41 CGGAGCGGGACGCCAGCCGCCTCATCTTCCAGGTGCTGGAT CGGAGCGGGACGCCAGCCGCCTCAACTTCCAGGTGCTGGAT < 41bp 0.381973711138487 0.736673305096462 0.07781607 0.15109366 prediction 0.473346610192924 Functional Gain - CAMK1 ENSG00000134072 CDS Human protein_coding chr3:9804666 chr3:9804662 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_112495 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:9804628-9804663
64251 chr16 30680872 30680872 1 + C A SARC 30680871 + 30680851 30680891 41 ACCTTCTCAGCAAGACCCCACCGGGAGCCCTTTTGGGGGCA ACCTTCTCAGCAAGACCCCACAGGGAGCCCTTTTGGGGGCA < 41bp 0.480236153764474 0.736664334383227 0.87533647 0.908999 prediction 0.473328668766454 Functional Gain - FBRS ENSG00000156860 CDS Human protein_coding chr16:30680871 chr16:30680872 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_112499 0 0 1 IGF2BP3 POSTAR2 ENCODE chr16:30680813-30680918
64251 chr4 1332318 1332318 1 + C T SKCM 1332317 + 1332297 1332337 41 CATGGCCCACTGTGCCAACTCCCGCCTGGTCTGCAAGATTT CATGGCCCACTGTGCCAACTCTCGCCTGGTCTGCAAGATTT < 41bp 0.47130797239215 0.736662862682015 0.08047509 0.12613615 prediction 0.473325725364031 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1332317 chr4:1332318 synonymous SNV . 0 22 hm5C_associated_SNPs_112501 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:1332312-1332348
64251 chr2 202899496 202899496 1 + C G rs150336105 202899495 + 202899475 202899515 41 CCACGGAGAGAAGGGCATCTCCGTGCCGGACCACGGCTTCT CCACGGAGAGAAGGGCATCTCGGTGCCGGACCACGGCTTCT < 41bp 0.624615236729893 0.861259590337607 0.6189886 0.66953516 prediction 0.473288707215429 Functional Gain - FZD7 ENSG00000155760 CDS Human protein_coding chr2:202899495 chr2:202899496 synonymous SNV . 0 22 hm5C_associated_SNPs_112503 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585672 chr2:202899480-202899500
64251 chr14 24641319 24641319 1 + A G rs532339408 24641316 + 24641296 24641336 41 TGCAGTAGGCGGCCCGGGGCCACACCGCGGCCGCCCAAGCC TGCAGTAGGCGGCCCGGGGCCACGCCGCGGCCGCCCAAGCC < 41bp 0.498514086977242 0.736639522260944 0.23822224 0.23865587 prediction 0.473279044521889 Functional Gain - REC8 ENSG00000100918 UTR5 Human protein_coding chr14:24641316 chr14:24641319 . . 0 24 hm5C_associated_SNPs_112505 0 0 1 SF3A3 POSTAR2 ENCODE chr14:24641241-24641322
64251 chr9 128728190 128728190 1 + T A ESCA 128728186 + 128728166 128728206 41 AGGCCCAGGAAGTGTGCACTCGGATACCTCTAACTAATCTC AGGCCCAGGAAGTGTGCACTCGGAAACCTCTAACTAATCTC < 41bp 0.626355771461115 0.862994476601119 0.081369966 0.050340652 prediction 0.473277410280007 Functional Gain - PBX3 ENSG00000167081 CDS Human protein_coding chr9:128728186 chr9:128728190 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_112506 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:128728179-128728200
64251 chr17 17700053 17700053 1 + A G rs61746214 17700050 + 17700030 17700070 41 AGATGGGAAGGAGGAGAGGCCTGAGGGTTCCCCCACCCTCT AGATGGGAAGGAGGAGAGGCCTGGGGGTTCCCCCACCCTCT < 41bp 0.478462721490165 0.736633452466985 0.7250521 0.9026143 prediction 0.473266904933971 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17700050 chr17:17700053 nonsynonymous SNV 0.018 2 24 hm5C_associated_SNPs_112508 1 0 2 FXR2 POSTAR2 ENCODE chr17:17700009-17700080
64251 chr12 109523615 109523615 1 + A G UCEC 109523612 + 109523592 109523632 41 CAATCAGTGGCTGTGGGTCTCCGATGACACTGTCCGCAAGG CAATCAGTGGCTGTGGGTCTCCGGTGACACTGTCCGCAAGG < 41bp 0.504976951406983 0.741605215490147 0.30642438 0.7553085 prediction 0.473256528166328 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109523612 chr12:109523615 nonsynonymous SNV 0.797 5 24 hm5C_associated_SNPs_112511 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:109523593-109523620
64251 chr9 127975693 127975693 1 + C G rs139098107 127975692 + 127975672 127975712 41 ACCTGCAAGGGCCTCTTGCCCCGGTATGAACATGCTAGCTT ACCTGCAAGGGCCTCTTGCCCGGGTATGAACATGCTAGCTT < 41bp 0.636348505767785 0.872963201584293 0.22635311 0.8307462 prediction 0.473229391633015 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127975692 chr9:127975693 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112515 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr9:127975676-127975697
64251 chr10 12257743 12257743 1 + C G ESCA 12257742 + 12257722 12257762 41 TTCTTCTCTCTCTGTAGGCACCAGAATTTCCTGAGTTTGCC TTCTTCTCTCTCTGTAGGCACGAGAATTTCCTGAGTTTGCC < 41bp 0.418221795604461 0.736610694990881 0.08291471 0.19732887 prediction 0.473221389981763 Functional Gain - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12257742 chr10:12257743 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_112516 0 0 5 PPIG POSTAR2 ENCODE chr10:12257738-12257810
64251 chr1 214501057 214501057 1 + C G rs140909791 214501056 + 214501036 214501076 41 GAGCTGTACAGGAAATCAAGCCGGGAGAGGAGGTGAGTTCA GAGCTGTACAGGAAATCAAGCGGGGAGAGGAGGTGAGTTCA < 41bp 0.623676270097803 0.860279384149092 0.8171715 0.8948659 prediction 0.473206228102579 Functional Gain - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214501056 chr1:214501057 nonsynonymous SNV 0.083 3 22 hm5C_associated_SNPs_112517 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:214501041-214501062
64251 chr11 66241314 66241314 1 + C T BLCA 66241313 + 66241293 66241333 41 GCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGGAGATC GCTTCTCCGAGGACTCAGCCCTGGGTGTCTGGCGGGAGATC < 41bp 0.535523863301514 0.772124746796815 0.8859745 0.6767005 prediction 0.473201766990601 Functional Gain - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66241313 chr11:66241314 nonsynonymous SNV 0.909 3 22 hm5C_associated_SNPs_112519 0 0 1 PPIG POSTAR2 ENCODE chr11:66241202-66241342
64251 chr11 94862433 94862433 1 + C A UCEC 94862432 + 94862412 94862452 41 GGGAAGAGTTGGTGAGCATTCCCTGGAAGGTGCTCAAGGTC GGGAAGAGTTGGTGAGCATTCACTGGAAGGTGCTCAAGGTC < 41bp 0.483338887718069 0.736598984642915 0.18888023 0.19019175 prediction 0.47319796928583 Functional Gain - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94862432 chr11:94862433 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112520 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:94862432-94862463
64251 chr10 102684367 102684367 1 + T C UCEC 102684365 + 102684345 102684385 41 TAAGGCCGATTCTAATGTATCTTCAGGGAAAATTTCTGGGG TAAGGCCGATTCTAATGTATCTCCAGGGAAAATTTCTGGGG < 41bp 0.433430991013415 0.736595022599778 0.13847598 0.908671 prediction 0.473190045199556 Functional Gain - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102684365 chr10:102684367 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_112521 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:102684342-102684367
64251 chr20 334121 334121 1 + C G rs540463785 334120 + 334100 334140 41 ACCAAGGCAGAGCCCTTGGACCCCGAAGCCGACAGCCACGT ACCAAGGCAGAGCCCTTGGACGCCGAAGCCGACAGCCACGT < 41bp 0.413438808846723 0.736588101767192 0.099449575 0.24595651 prediction 0.473176203534384 Functional Gain - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:334120 chr20:334121 nonsynonymous SNV 0.170 0 22 hm5C_associated_SNPs_112523 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:334090-334124
64251 chr10 70509403 70509403 1 + C T STAD 70509402 + 70509382 70509422 41 GGAGAGTTCGACGTGTTGTTCCACGTTACACAGTTCAGTTT GGAGAGTTCGACGTGTTGTTCTACGTTACACAGTTCAGTTT < 41bp 0.492495439218863 0.736587452349384 0.073806494 0.033256084 prediction 0.473174904698768 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70509402 chr10:70509403 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_112524 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70509358-70509407
64251 chr19 50386061 50386061 1 + C T COAD 50386060 + 50386040 50386080 41 CAACCGTGGAGCGGGGCCCTCCAGTTACAGAGGAGGAGTGG CAACCGTGGAGCGGGGCCCTCTAGTTACAGAGGAGGAGTGG < 41bp 0.531070640655697 0.767654142325875 0.23791105 0.32565564 prediction 0.473167003340357 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386060 chr19:50386061 nonsynonymous SNV 0.791 4 22 hm5C_associated_SNPs_112525 0 0 5 BUD13 POSTAR2 ENCODE chr19:50386042-50386105
64251 chr16 57503193 57503193 1 + C T COAD 57503192 + 57503172 57503212 41 AGACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTCAGTG AGACCTCATCTCCAACAGCCCTCGGGTCATTCCGGTCAGTG < 41bp 0.557786902904493 0.794364857697617 0.16087356 0.07682723 prediction 0.47315590958625 Functional Gain - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57503192 chr16:57503193 synonymous SNV . 0 22 hm5C_associated_SNPs_112527 0 0 4 GRWD1 POSTAR2 ENCODE chr16:57503164-57503209
64251 chr14 24909588 24909588 1 - T C rs200399285 24909591 - 24909571 24909611 41 ACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGA ACCAATTCTTCCCCTGGATACACGTCGGGGACCTGGCAGGA < 41bp 0.521569607556715 0.758137674389546 0.04376161 0.08683464 prediction 0.473136133665663 Functional Gain - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909591 chr14:24909588 nonsynonymous SNV 0.894 1 24 hm5C_associated_SNPs_112532 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:24909548-24909594
64251 chr22 46689158 46689158 1 + C A rs535052289 46689157 + 46689137 46689177 41 CTTCCAGAGGCAGCCTCCCCCCACTGCCTGTCCCCGTCCCC CTTCCAGAGGCAGCCTCCCCCAACTGCCTGTCCCCGTCCCC < 41bp 0.473392874854566 0.736563164305155 0.10161048 0.2521917 prediction 0.47312632861031 Functional Gain - TTC38 ENSG00000075234 UTR3 Human protein_coding chr22:46689157 chr22:46689158 . . 0 22 hm5C_associated_SNPs_112534 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:46689125-46689172
64251 chr17 79078373 79078373 1 + C T UCEC 79078372 + 79078352 79078392 41 GCCGGCCTGGAGCGCAATGGCCGTATGCGGGTGAAGGCCAT GCCGGCCTGGAGCGCAATGGCTGTATGCGGGTGAAGGCCAT < 41bp 0.527877595759244 0.764437488301637 0.45241514 0.17951244 prediction 0.473119785084787 Functional Gain - BAIAP2 ENSG00000175866 CDS Human protein_coding chr17:79078372 chr17:79078373 nonsynonymous SNV 0.582 4 22 hm5C_associated_SNPs_112535 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79078363-79078387
64251 chr11 63963172 63963172 1 + C A UCEC 63963168 + 63963148 63963188 41 CTCAGCGTCCTCCTTGGGGTCGATCTGGGCAGTATGGATGA CTCAGCGTCCTCCTTGGGGTCGATATGGGCAGTATGGATGA < 41bp 0.316364520922845 0.736556410668844 0.3400554 0.2571993 prediction 0.473112821337689 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63963168 chr11:63963172 nonsynonymous SNV 0.985 1 25 hm5C_associated_SNPs_112536 0 0 24 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:63963153-63963179
64251 chrX 48676757 48676757 1 + C T UCEC 48676756 + 48676736 48676776 41 AACGTGGCATGGAACGGGCCCCGCATGGGTGATGCTGACTA AACGTGGCATGGAACGGGCCCTGCATGGGTGATGCTGACTA < 41bp 0.551248361037538 0.787766786961231 0.06196922 0.13094744 prediction 0.473036851847386 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48676756 chrX:48676757 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_112543 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chrX:48676748-48676778
64251 chr2 231281034 231281034 1 + T C STAD 231281032 + 231281012 231281052 41 ATGGCAGGTGGGGGCGGCGACCTGAGCACCAGGTGAGTCTT ATGGCAGGTGGGGGCGGCGACCCGAGCACCAGGTGAGTCTT < 41bp 0.498566040203268 0.736506467492201 0.69693154 0.87542987 prediction 0.473012934984401 Functional Gain - SP100 ENSG00000067066 CDS Human protein_coding chr2:231281032 chr2:231281034 nonsynonymous SNV 0.038 3 23 hm5C_associated_SNPs_112545 0 0 3 DDX3X POSTAR2 ENCODE chr2:231281010-231281043
64251 chr8 145135352 145135352 1 + A G LUSC 145135349 + 145135329 145135369 41 CCCTGCTGCCAGCCTCAGGACAGATTGCGCTGCTTGAGATG CCCTGCTGCCAGCCTCAGGACAGGTTGCGCTGCTTGAGATG < 41bp 0.523389664133649 0.7598552698121 0.1113202 0.23724434 prediction 0.472931211356902 Functional Gain - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135349 chr8:145135352 nonsynonymous SNV 0.944 1 24 hm5C_associated_SNPs_112554 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:145135320-145135400
64251 chr1 32044836 32044836 1 + C G rs139742782 32044832 + 32044812 32044852 41 GCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGG GCATGGAGGTCGTATCTATCCAGTGTTGGGAACGTACTGGG < 41bp 0.438585306974993 0.736452655080975 0.8743288 0.8417318 prediction 0.472905310161951 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32044832 chr1:32044836 synonymous SNV . 0 25 hm5C_associated_SNPs_112558 0 0 3 DKC1 POSTAR2 ENCODE chr1:32044797-32044841
64251 chr6 27115153 27115153 1 + T C rs61740500 27115151 + 27115131 27115171 41 AGAAGACCCGTATCATCCCGCGTCACCTCCAACTGGCCATC AGAAGACCCGTATCATCCCGCGCCACCTCCAACTGGCCATC < 41bp 0.528991450281493 0.765442551016428 0.039491236 0.047393978 prediction 0.47290220146987 Functional Gain - HIST1H2AH ENSG00000184825 CDS Human other chr6:27115151 chr6:27115153 synonymous SNV . 0 23 hm5C_associated_SNPs_112559 0 0 62 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:27115150-27115172
64251 chrX 48678568 48678568 1 + C T SARC 48678567 + 48678547 48678587 41 TTGATGCTGCACGGGGGGATCCGCTGGGGGGCTGCCAGGTG TTGATGCTGCACGGGGGGATCTGCTGGGGGGCTGCCAGGTG < 41bp 0.524770884485851 0.761220792811339 0.88532054 0.8903073 prediction 0.472899816650976 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48678567 chrX:48678568 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_112560 0 0 4 EIF3H POSTAR2 ENCODE chrX:48678530-48678610
64251 chr11 118272373 118272373 1 + C A UCEC 118272369 + 118272349 118272389 41 GTTCGGGGCGACGGACTCTCCATTCCAGAACCATGGCCCAA GTTCGGGGCGACGGACTCTCCATTACAGAACCATGGCCCAA < 41bp 0.348929950857329 0.736449727962102 0.41253716 0.012251079 prediction 0.472899455924205 Functional Gain - LOC100131626 ENSG00000254873 CDS Human antisense chr11:118272369 chr11:118272373 stopgain . 0 25 hm5C_associated_SNPs_112561 0 0 33 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:118272334-118272375
64251 chr11 129722454 129722454 1 + C T SKCM 129722453 + 129722433 129722473 41 TGTGTTGGTCAGTGAAGTACCCGCTGAAGTACTTTAGCCAC TGTGTTGGTCAGTGAAGTACCTGCTGAAGTACTTTAGCCAC < 41bp 0.512951873264771 0.749399341236988 0.28097397 0.3909757 prediction 0.472894935944433 Functional Gain - TMEM45B ENSG00000151715 CDS Human protein_coding chr11:129722453 chr11:129722454 nonsynonymous SNV 0.741 1 22 hm5C_associated_SNPs_112564 0 0 4 DDX3X POSTAR2 ENCODE chr11:129722390-129722479
64251 chr19 39907036 39907036 1 + C T rs2277743 39907035 + 39907015 39907055 41 CAGCAGCGCCGGGGGTATTGCCGAGTGCTTCGTGCAGAGGG CAGCAGCGCCGGGGGTATTGCTGAGTGCTTCGTGCAGAGGG < 41bp 0.516870725881048 0.753316100559129 0.8878073 0.48141143 prediction 0.472890749356163 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39907035 chr19:39907036 synonymous SNV . 0 22 hm5C_associated_SNPs_112565 0 0 2 PPIG POSTAR2 ENCODE chr19:39906986-39907054
64251 chr11 57243663 57243663 1 + T C PRAD 57243661 + 57243641 57243681 41 TTGTTCGCGGACCTGGCCAACCTGAGCCACCTCTTCCTCCA TTGTTCGCGGACCTGGCCAACCCGAGCCACCTCTTCCTCCA < 41bp 0.474228678986494 0.736442988023489 0.25459188 0.27155054 prediction 0.472885976046978 Functional Gain - RTN4RL2 ENSG00000186907 CDS Human protein_coding chr11:57243661 chr11:57243663 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_112566 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57243656-57243689
64251 chr16 69317969 69317969 1 + C T COAD 69317968 + 69317948 69317988 41 TAGGTTGGTTCATTCTGGCTCCGGATGTCGATCCCCCTCCC TAGGTTGGTTCATTCTGGCTCTGGATGTCGATCCCCCTCCC < 41bp 0.534553515609741 0.770990748055427 0.750822 0.4952725 prediction 0.472874464891372 Functional Gain - SNTB2 ENSG00000168807 CDS Human protein_coding chr16:69317968 chr16:69317969 synonymous SNV . 0 22 hm5C_associated_SNPs_112571 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:69317957-69317991
64251 chr9 139699244 139699244 1 + C G rs200940788 139699243 + 139699223 139699263 41 GACTTGGACTTCCCCTCGAACCTGATGAGCACGGAGACCCT GACTTGGACTTCCCCTCGAACGTGATGAGCACGGAGACCCT < 41bp 0.411630359618342 0.736436330012416 0.1423282 0.3157369 prediction 0.472872660024833 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139699243 chr9:139699244 nonsynonymous SNV 0.385 0 22 hm5C_associated_SNPs_112572 0 0 7 BUD13 POSTAR2 ENCODE chr9:139699210-139699274
64251 chr3 38416727 38416727 1 + C A BLCA 38416726 + 38416706 38416746 41 CTTCTGCAACCCGGTTGACTCCCAGCACTACATGGCACTCC CTTCTGCAACCCGGTTGACTCACAGCACTACATGGCACTCC < 41bp 0.471865758197812 0.736432491715238 0.064525425 0.11539811 prediction 0.472864983430476 Functional Gain - XYLB ENSG00000093217 CDS Human protein_coding chr3:38416726 chr3:38416727 synonymous SNV . 0 22 hm5C_associated_SNPs_112574 0 0 3 DDX24 POSTAR2 ENCODE chr3:38416658-38416745
64251 chr3 50388901 50388901 1 + C A COAD 50388900 + 50388880 50388920 41 GAGACCGAGTCACACATCTACCGAGCTCTGCGTACTGCTTC GAGACCGAGTCACACATCTACAGAGCTCTGCGTACTGCTTC < 41bp 0.546787389470043 0.78321834636823 0.24223217 0.44941148 prediction 0.472861913796375 Functional Gain - CYB561D2 ENSG00000114395;ENSG00000272104 CDS Human other chr3:50388900 chr3:50388901 synonymous SNV . 0 22 hm5C_associated_SNPs_112575 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:50388888-50388916
64251 chr8 28906493 28906493 1 + T C UCEC 28906491 + 28906471 28906511 41 AAGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAGAGT AAGCAGCAATCCTGGAGAGTCACGGGATAGATGTGCAGAGT < 41bp 0.467094269971621 0.736430539825329 0.8028351 0.85915256 prediction 0.472861079650658 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28906491 chr8:28906493 synonymous SNV . 0 23 hm5C_associated_SNPs_112577 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:28906491-28906523
64251 chr18 56816839 56816839 1 + T C UCEC 56816837 + 56816817 56816857 41 CTCACAGGCAGTGAGAGCCCCATCGTGGTGGTGCTGAGGTA CTCACAGGCAGTGAGAGCCCCACCGTGGTGGTGCTGAGGTA < 41bp 0.576440343482956 0.812866642017949 0.05628547 0.047565162 prediction 0.472852597069987 Functional Gain - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56816837 chr18:56816839 nonsynonymous SNV 0.555 2 23 hm5C_associated_SNPs_112580 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:56816827-56816852
64251 chr8 11841998 11841998 1 + C A rs371844029 11841997 + 11841977 11842017 41 TGGCGACTGCAAGGTACTTGCCGGCCAAAATGTCTAAAAAA TGGCGACTGCAAGGTACTTGCAGGCCAAAATGTCTAAAAAA < 41bp 0.482528725595494 0.736387849598633 0.15339777 0.72712934 prediction 0.472775699197267 Functional Gain - DEFB135 ENSG00000205883 CDS Human protein_coding chr8:11841997 chr8:11841998 synonymous SNV . 0 22 hm5C_associated_SNPs_112591 0 0 1 RBM10 POSTAR2 GSE44976,GSM1095142 chr8:11841980-11842000
64251 chr1 155039366 155039366 1 + C A SARC 155039365 + 155039345 155039385 41 TCCTGCCAGGCAGAGGGCCCCCGGGCCTACAAGCGCTGGGT TCCTGCCAGGCAGAGGGCCCCAGGGCCTACAAGCGCTGGGT < 41bp 0.566990364973955 0.803357824758551 0.87901807 0.9326606 prediction 0.472734919569193 Functional Gain - EFNA4 ENSG00000243364 CDS Human protein_coding chr1:155039365 chr1:155039366 synonymous SNV . 0 22 hm5C_associated_SNPs_112601 0 0 1 SND1 POSTAR2 ENCODE chr1:155039314-155039394
64251 chr13 96361587 96361587 1 + C A KIRC 96361583 + 96361563 96361603 41 TGCTTTATCTCAGTTTCATGCTGCCGTAGGTTTGTATCATG TGCTTTATCTCAGTTTCATGCTGCAGTAGGTTTGTATCATG < 41bp 0.319512587299654 0.736361217796745 0.05427444 0.16362754 prediction 0.47272243559349 Functional Gain - DNAJC3 ENSG00000102580 CDS Human protein_coding chr13:96361583 chr13:96361587 synonymous SNV . 0 25 hm5C_associated_SNPs_112606 0 0 1 GRWD1 POSTAR2 ENCODE chr13:96361515-96361592
64251 chr20 55049793 55049793 1 + T G UCEC 55049790 + 55049770 55049810 41 GGACAAATCTGCAGAAAAGGCTCTTGGGAAGGCAGCATCTC GGACAAATCTGCAGAAAAGGCTCGTGGGAAGGCAGCATCTC < 41bp 0.346126437703431 0.736354741603718 0.07697767 0.060549885 prediction 0.472709483207435 Functional Gain - RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55049790 chr20:55049793 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_112607 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:55049742-55049808
64251 chr18 77123352 77123352 1 + T G rs191885449 77123349 + 77123329 77123369 41 AACAACATTGAGGAAAGAAACTGTAAAAGGCGTAAACAGAT AACAACATTGAGGAAAGAAACTGGAAAAGGCGTAAACAGAT < 41bp 0.542798959020997 0.779142766806419 0.15392768 0.2632898 prediction 0.472687615570844 Functional Gain - ATP9B ENSG00000166377 intronic Human protein_coding chr18:77123349 chr18:77123352 . . 0 24 hm5C_associated_SNPs_112612 0 0 1 DGCR8 POSTAR2 ENCODE chr18:77123351-77123394
64251 chr16 23701189 23701189 1 + C A SKCM 23701188 + 23701168 23701208 41 TCTTCTCTTGCAGGATCACACCAAGCTCATCTTGTGCCCAC TCTTCTCTTGCAGGATCACACAAAGCTCATCTTGTGCCCAC < 41bp 0.559572785250554 0.795912581037757 0.4073999 0.51594853 prediction 0.472679591574406 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23701188 chr16:23701189 synonymous SNV . 0 22 hm5C_associated_SNPs_112614 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:23701180-23701200
64251 chr3 63973880 63973880 1 + C A OV 63973879 + 63973859 63973899 41 CACCGCAGCCTCTCAGGGACCCGCATCCCGCCCCTCCTAGA CACCGCAGCCTCTCAGGGACCAGCATCCCGCCCCTCCTAGA < 41bp 0.550913243750387 0.787249466062851 0.03268221 0.068876475 prediction 0.472672444624927 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63973879 chr3:63973880 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_112616 0 0 2 PPIG POSTAR2 ENCODE chr3:63973871-63973925
64251 chr1 6649302 6649302 1 + C A rs77070670 6649301 + 6649281 6649321 41 GGCCACCAGAGCCCACTTGGCCCCACCCCTCAATAAACCGT GGCCACCAGAGCCCACTTGGCACCACCCCTCAATAAACCGT < 41bp 0.489058402629705 0.73633564177626 0.018511504 0.016743273 prediction 0.47267128355252 Functional Gain - ZBTB48 ENSG00000204859 UTR3 Human protein_coding chr1:6649301 chr1:6649302 . . 0 22 hm5C_associated_SNPs_112617 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:6649284-6649311
64251 chr12 113733830 113733830 1 + C G rs61943642 113733829 + 113733809 113733849 41 ACTCAGCAGCAGTGCAGCCCCCGCCGCCCAGCAGCCCCCAG ACTCAGCAGCAGTGCAGCCCCGGCCGCCCAGCAGCCCCCAG < 41bp 0.430904197701869 0.736325750251768 0.053018034 0.3249604 prediction 0.472651500503536 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113733829 chr12:113733830 synonymous SNV . 0 22 hm5C_associated_SNPs_112621 0 0 1 UCHL5 POSTAR2 ENCODE chr12:113733821-113733864
64251 chr9 132565599 132565599 1 + C A UCEC 132565598 + 132565578 132565618 41 CGTGGGCCTAGCCATCGGGGCCGCGTCGGCCATCACCGGCT CGTGGGCCTAGCCATCGGGGCAGCGTCGGCCATCACCGGCT < 41bp 0.52711095933659 0.76341204629128 0.13105506 0.40019748 prediction 0.472602173909381 Functional Gain - TOR1B ENSG00000136816 CDS Human protein_coding chr9:132565598 chr9:132565599 synonymous SNV . 0 22 hm5C_associated_SNPs_112626 0 0 4 DDX3X POSTAR2 ENCODE chr9:132565576-132565617
64251 chr1 36306920 36306920 1 + C T COAD 36306919 + 36306899 36306939 41 ACCGTTCGGGTGCAGACTTCCCGGCAGGAGATCTCCCAAGA ACCGTTCGGGTGCAGACTTCCTGGCAGGAGATCTCCCAAGA < 41bp 0.537622589450666 0.773922057471532 0.37319034 0.2983594 prediction 0.472598936041731 Functional Gain - AGO4 ENSG00000134698 CDS Human protein_coding chr1:36306919 chr1:36306920 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_112629 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:36306902-36306946
64251 chr5 640669 640669 1 + C G rs138955347 640665 + 640645 640685 41 GCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGT GCTGAGCAGCAGCAGCAGCACGCCGGGGAGATGAGCGAGGT < 41bp 0.570810621017101 0.807105594983516 0.12068987 0.4933297 prediction 0.47258994793283 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:640665 chr5:640669 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_112631 0 0 5 BUD13 POSTAR2 ENCODE chr5:640649-640722
64251 chr3 50155869 50155869 1 + C A LIHC 50155868 + 50155848 50155888 41 GTCCGGAAAGCCATGTTTGCCCGGTTCACTGAGATGGAGTG GTCCGGAAAGCCATGTTTGCCAGGTTCACTGAGATGGAGTG < 41bp 0.538536624652261 0.774830554251511 0.23994794 0.70512587 prediction 0.4725878591985 Functional Gain - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50155868 chr3:50155869 synonymous SNV . 0 22 hm5C_associated_SNPs_112632 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr3:50155830-50155894
64251 chr11 65108975 65108975 1 + C T SARC 65108974 + 65108954 65108994 41 AGAAGCGAGGTGCCCCGGATCCCCGAGTTGATGATGACAGC AGAAGCGAGGTGCCCCGGATCTCCGAGTTGATGATGACAGC < 41bp 0.460437378654358 0.736286851465644 0.421109 0.63316846 prediction 0.472573702931288 Functional Gain - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65108974 chr11:65108975 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_112636 0 0 7 FMR1 POSTAR2 ENCODE chr11:65108878-65109034
64251 chr12 132426053 132426053 1 + C T STAD 132426052 + 132426032 132426072 41 ATTTCACCTCGCAGAAGGGGCCGCAGGATCCCAGTGCCTGC ATTTCACCTCGCAGAAGGGGCTGCAGGATCCCAGTGCCTGC < 41bp 0.549348885134587 0.785628828242452 0.095128715 0.13793501 prediction 0.472559886215731 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132426052 chr12:132426053 nonsynonymous SNV 0.431 2 22 hm5C_associated_SNPs_112640 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:132426034-132426055
64251 chr1 109241807 109241807 1 + C A UCEC 109241806 + 109241786 109241826 41 CTCCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGG CTCCAAGGAGATCTCTGAGTCAACGGAGGTCCCCAAGAAGG < 41bp 0.488249483785618 0.736272529518559 0.17769498 0.33484387 prediction 0.472545059037118 Functional Gain - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109241806 chr1:109241807 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_112643 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr1:109241790-109241811
64251 chr11 36250825 36250825 1 + C A THCA 36250824 + 36250804 36250844 41 AGTGCCAACAGTGCCAGCTCCCAGGCAGCCAGCAGCCTCCT AGTGCCAACAGTGCCAGCTCCAAGGCAGCCAGCAGCCTCCT < 41bp 0.523099321878205 0.759365789047593 0.34368503 0.47509804 prediction 0.472532934338776 Functional Gain - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36250824 chr11:36250825 nonsynonymous SNV 0.981 1 22 hm5C_associated_SNPs_112645 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:36250812-36250842
64251 chr20 55092031 55092031 1 + C A BLCA 55092030 + 55092010 55092050 41 CAGCAGAGTCTGTTTCAAAACCAGATGTCAGTGAAGGTAAG CAGCAGAGTCTGTTTCAAAACAAGATGTCAGTGAAGGTAAG < 41bp 0.481708792782445 0.736264481378633 0.10808879 0.028774709 prediction 0.472528962757266 Functional Gain - RTFDC1 ENSG00000022277 CDS Human protein_coding chr20:55092030 chr20:55092031 nonsynonymous SNV 0.051 0 22 hm5C_associated_SNPs_112646 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:55092020-55092032
64251 chr20 36012616 36012616 1 + C T SKCM 36012615 + 36012595 36012635 41 GCGGCGCCGCAGCCTGGAGCCCGCCGAGAACGTGCACGGCG GCGGCGCCGCAGCCTGGAGCCTGCCGAGAACGTGCACGGCG < 41bp 0.502888907181169 0.739144618062881 0.47064507 0.47770396 prediction 0.472511421763424 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36012615 chr20:36012616 synonymous SNV . 0 22 hm5C_associated_SNPs_112647 0 0 1 PPIG POSTAR2 ENCODE chr20:36012564-36012644
64251 chr14 55534414 55534414 1 + C G rs576001788 55534410 + 55534390 55534430 41 AGATTACAGGCGTGAGCCACCATGCGTGACCTTTTTTTCTT AGATTACAGGCGTGAGCCACCATGGGTGACCTTTTTTTCTT < 41bp 0.47526782989898 0.736252160049673 0.17674816 0.31120417 prediction 0.472504320099345 Functional Gain - MAPK1IP1L ENSG00000168175 UTR3 Human protein_coding chr14:55534410 chr14:55534414 . . 0 25 hm5C_associated_SNPs_112648 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:55534391-55534430
64251 chr12 52448232 52448232 1 + C G rs149908785 52448231 + 52448211 52448251 41 CACCATGGACCTGGCCAGCCCCGAGGCAGCCCCCGCTGCCC CACCATGGACCTGGCCAGCCCGGAGGCAGCCCCCGCTGCCC < 41bp 0.63638324093858 0.872626719952976 0.6044921 0.9421149 prediction 0.472486958028791 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448231 chr12:52448232 synonymous SNV . 0 22 hm5C_associated_SNPs_112655 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:52448208-52448266
64251 chr8 22865620 22865620 1 - G T KIRC 22865621 - 22865601 22865641 41 TGTGTCCTCAGCCTTACCTCCCGGGTGGAGCTCTCCACAAA TGTGTCCTCAGCCTTACCTCCAGGGTGGAGCTCTCCACAAA < 41bp 0.546562536205092 0.782804935184154 0.7239723 0.86956346 prediction 0.472484797958124 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865621 chr8:22865620 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_112656 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:22865573-22865630
64251 chr6 33179091 33179091 1 + T G rs564866501 33179088 + 33179068 33179108 41 GGCCCTGCTCCCAAGCGACCCCGTGGAGGGGGCGCAGGGGG GGCCCTGCTCCCAAGCGACCCCGGGGAGGGGGCGCAGGGGG < 41bp 0.407781803363226 0.736239316288067 0.11203009 0.30707318 prediction 0.472478632576135 Functional Gain - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179088 chr6:33179091 synonymous SNV . 0 24 hm5C_associated_SNPs_112657 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:33179074-33179093
64251 chr3 32932471 32932471 1 + C G LIHC 32932470 + 32932450 32932490 41 GCTACGTGGGCATTGGGCTCCCGGGCCTGAGCTTCGGCAGT GCTACGTGGGCATTGGGCTCCGGGGCCTGAGCTTCGGCAGT < 41bp 0.637831701381263 0.874069716448692 0.87419534 0.90697026 prediction 0.472476030134858 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932470 chr3:32932471 nonsynonymous SNV 0.923 3 22 hm5C_associated_SNPs_112658 0 0 3 EIF3H POSTAR2 ENCODE chr3:32932453-32932544
64251 chr9 101570311 101570311 1 + A G BLCA 101570308 + 101570288 101570328 41 TTAACATCTACCTCAGCGACCGCATCTCACTGCACCGCCGC TTAACATCTACCTCAGCGACCGCGTCTCACTGCACCGCCGC < 41bp 0.495790091001988 0.736208975383317 0.12103528 0.28384078 prediction 0.472417950766635 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101570308 chr9:101570311 nonsynonymous SNV 0.478 2 24 hm5C_associated_SNPs_112666 0 0 1 SF3B1 POSTAR2 ENCODE chr9:101570304-101570335
64251 chr1 220987469 220987469 1 + C G rs11118608 220987468 + 220987448 220987488 41 GGAGTGCTCCTTCTCCAGTTCCGGGTGAAAAAGTTCTGAAT GGAGTGCTCCTTCTCCAGTTCGGGGTGAAAAAGTTCTGAAT < 41bp 0.592152554313211 0.828357216162871 0.9272578 0.9375912 prediction 0.47240932369932 Functional Gain - MARC1 ENSG00000186205 UTR3 Human protein_coding chr1:220987468 chr1:220987469 . . 0 22 hm5C_associated_SNPs_112667 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:220987437-220987492
64251 chr20 36030849 36030849 1 + C A rs149269541 36030845 + 36030825 36030865 41 GTTCCGCCTGCAGATCGCCTCAGGCATGGCGTACGTGGAGC GTTCCGCCTGCAGATCGCCTCAGGAATGGCGTACGTGGAGC < 41bp 0.691678780922933 0.927883088139275 0.7037483 0.9015484 prediction 0.472408614432684 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36030845 chr20:36030849 synonymous SNV . 0 25 hm5C_associated_SNPs_112668 0 0 5 BUD13 POSTAR2 ENCODE chr20:36030761-36030882
64251 chr5 68525816 68525816 1 + C G rs183528654 68525815 + 68525795 68525835 41 TTGTGATCTTGTATGCAAATCCTGATAACCATTAACCTTCT TTGTGATCTTGTATGCAAATCGTGATAACCATTAACCTTCT < 41bp 0.527868874756178 0.764067594916079 0.049600184 0.13303441 prediction 0.472397440319802 Functional Gain - MRPS36 ENSG00000134056 UTR3 Human protein_coding chr5:68525815 chr5:68525816 . . 0 22 hm5C_associated_SNPs_112670 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:68525753-68525816
64251 chr1 222892282 222892282 1 + C A rs73124895 222892281 + 222892261 222892301 41 TATAAGTGACTTGAGGTCATCCAGGGCACGACTCCTTGAAC TATAAGTGACTTGAGGTCATCAAGGGCACGACTCCTTGAAC < 41bp 0.555031342568123 0.791229045990759 0.8474839 0.9093545 prediction 0.472395406845273 Functional Gain - BROX ENSG00000162819 CDS Human protein_coding chr1:222892281 chr1:222892282 synonymous SNV . 0 22 hm5C_associated_SNPs_112671 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:222892266-222892298
64251 chr5 102522037 102522037 1 + C G LUAD 102522033 + 102522013 102522053 41 CCCATCAGGGTCTCACTGTGCGGGCCTGTTTAGCACCTCGG CCCATCAGGGTCTCACTGTGCGGGGCTGTTTAGCACCTCGG < 41bp 0.602517138069407 0.838714671119531 0.4478732 0.9169687 prediction 0.472395066100247 Functional Gain - PPIP5K2 ENSG00000145725 CDS Human protein_coding chr5:102522033 chr5:102522037 synonymous SNV . 0 25 hm5C_associated_SNPs_112672 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:102522017-102522055
64251 chr11 61541455 61541455 1 + C A LUAD 61541451 + 61541431 61541471 41 CCCCCCAGGCCCATGCTCACCTACCGCGTGGATGCGGACAA CCCCCCAGGCCCATGCTCACCTACAGCGTGGATGCGGACAA < 41bp 0.306438817970335 0.736186024500983 0.039274752 0.13417518 prediction 0.472372049001966 Functional Gain - MYRF ENSG00000124920 CDS Human protein_coding chr11:61541451 chr11:61541455 nonsynonymous SNV 0.923 2 25 hm5C_associated_SNPs_112676 0 0 1 DDX24 POSTAR2 ENCODE chr11:61541446-61541484
64251 chr1 36752132 36752132 1 + C T COAD 36752131 + 36752111 36752151 41 TATCCATGGGGCCAATATAACCGAGGAGGCTATGGAAACTA TATCCATGGGGCCAATATAACTGAGGAGGCTATGGAAACTA < 41bp 0.520281375811477 0.756458520348947 0.74106216 0.4191487 prediction 0.472354289074939 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752131 chr1:36752132 stopgain 1.000 1 22 hm5C_associated_SNPs_112678 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:36752106-36752144
64251 chr1 248028163 248028163 1 + C A LUSC 248028159 + 248028139 248028179 41 GAGAGCAAGAGCCGGCTGGTCCAGCAGAGCAAGGCCCTGAA GAGAGCAAGAGCCGGCTGGTCCAGAAGAGCAAGGCCCTGAA < 41bp 0.328818062363615 0.736173117786777 0.3932396 0.4445549 prediction 0.472346235573553 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248028159 chr1:248028163 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_112680 0 0 3 UCHL5 POSTAR2 ENCODE chr1:248028101-248028186
64251 chr9 139815643 139815643 1 + C T CESC 139815642 + 139815622 139815662 41 CGCCAGGAAGCTGTGGCTGGCCGCATACCCGCCATCTTCTC CGCCAGGAAGCTGTGGCTGGCTGCATACCCGCCATCTTCTC < 41bp 0.565052828892574 0.801206813871103 0.33192044 0.73603857 prediction 0.472307969957058 Functional Gain - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139815642 chr9:139815643 nonsynonymous SNV 0.463 4 22 hm5C_associated_SNPs_112685 0 0 2 GRWD1 POSTAR2 ENCODE chr9:139815503-139815658
64251 chr19 18497004 18497004 1 + C A COAD 18497003 + 18496983 18497023 41 CCGCAACCTGCACAGCCATGCCCGGGCAAGAACTCAGGACG CCGCAACCTGCACAGCCATGCACGGGCAAGAACTCAGGACG < 41bp 0.542258066357541 0.778403754905898 0.3829521 0.4300194 prediction 0.472291377096713 Functional Gain - GDF15 ENSG00000130513 CDS Human protein_coding chr19:18497003 chr19:18497004 nonsynonymous SNV 0.004 3 22 hm5C_associated_SNPs_112689 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:18496985-18497006
64251 chr15 58838038 58838038 1 + C A rs6084 58838037 + 58838017 58838057 41 GGATGCCATTCATACCTTTACCCGGGAGCACATGGGCCTGA GGATGCCATTCATACCTTTACACGGGAGCACATGGGCCTGA < 41bp 0.571003040957676 0.807148057104619 0.1969814 0.17525965 prediction 0.472290032293886 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58838037 chr15:58838038 synonymous SNV . 0 22 hm5C_associated_SNPs_112690 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr15:58838021-58838040
64251 chr16 15123857 15123857 1 + T C rs149809548 15123855 + 15123835 15123875 41 CCTGCAAGCGGCCTCACAGTCATGGATCTGGAAGCTGAGGG CCTGCAAGCGGCCTCACAGTCACGGATCTGGAAGCTGAGGG < 41bp 0.586625779002278 0.822769247299774 0.6691832 0.27181715 prediction 0.472286936594992 Functional Gain - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15123855 chr16:15123857 nonsynonymous SNV 0.966 1 23 hm5C_associated_SNPs_112691 0 0 6 BUD13 POSTAR2 ENCODE chr16:15123816-15123871
64251 chr11 67258362 67258362 1 + C A rs35665586 67258358 + 67258338 67258378 41 CAAAGTGCTGGAGCTGGACCCAGCCCTGGCGCCTGTGGTGA CAAAGTGCTGGAGCTGGACCCAGCACTGGCGCCTGTGGTGA < 41bp 0.690630430874304 0.926762801449123 0.23391578 0.44679716 prediction 0.472264741149638 Functional Gain - AIP ENSG00000110711 CDS Human protein_coding chr11:67258358 chr11:67258362 synonymous SNV . 0 25 hm5C_associated_SNPs_112693 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67258312-67258379
64251 chr15 89850730 89850730 1 + C A COAD 89850729 + 89850709 89850749 41 TCTCCAGGTGTGTCAGAGCTCCGGAGGAATTCCAAAAAATA TCTCCAGGTGTGTCAGAGCTCAGGAGGAATTCCAAAAAATA < 41bp 0.48700650770285 0.736129777476034 0.88665456 0.9021013 prediction 0.472259554952069 Functional Gain - FANCI ENSG00000140525 CDS Human protein_coding chr15:89850729 chr15:89850730 synonymous SNV . 0 22 hm5C_associated_SNPs_112694 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr15:89850699-89850735
64251 chr11 129722527 129722527 1 + C T rs139011868 129722526 + 129722506 129722546 41 GCGTCTCGAGATCGTCGAAGCCGCAATTAGGACTTTGTTTT GCGTCTCGAGATCGTCGAAGCTGCAATTAGGACTTTGTTTT < 41bp 0.531992667864593 0.768117734102292 0.21376649 0.0939537 prediction 0.472250132475399 Functional Gain - TMEM45B ENSG00000151715 CDS Human protein_coding chr11:129722526 chr11:129722527 synonymous SNV . 0 22 hm5C_associated_SNPs_112697 0 0 1 DDX3X POSTAR2 ENCODE chr11:129722501-129722536
64251 chr19 44103077 44103077 1 + C G BRCA 44103073 + 44103053 44103093 41 CATGAAGCGGGAGCACCCAGCGGACTTCGTGGCCCAGAAGC CATGAAGCGGGAGCACCCAGCGGAGTTCGTGGCCCAGAAGC < 41bp 0.439357162097696 0.736122572417521 0.8819649 0.9162792 prediction 0.472245144835042 Functional Gain - ZNF576 ENSG00000124444 CDS Human protein_coding chr19:44103073 chr19:44103077 nonsynonymous SNV 0.963 1 25 hm5C_associated_SNPs_112698 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44103054-44103081
64251 chr6 158504489 158504489 1 + C T rs138094772 158504488 + 158504468 158504508 41 GCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTG GCAGAGCAGTGAAGATTAGACTGAAGACCAAGGACTGGCTG < 41bp 0.53547548772974 0.771588163883954 0.19183671 0.12521994 prediction 0.472225352308428 Functional Gain - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158504488 chr6:158504489 nonsynonymous SNV 0.171 3 22 hm5C_associated_SNPs_112699 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:158504460-158504500
64251 chr4 71895099 71895099 1 + T C UCEC 71895097 + 71895077 71895117 41 GTTTTTGAGTACTTTGTGATCTTGCTGAAGACTACAGGCAG GTTTTTGAGTACTTTGTGATCTCGCTGAAGACTACAGGCAG < 41bp 0.476326601851982 0.736111218530712 0.18674201 0.16491133 prediction 0.472222437061425 Functional Gain - DCK ENSG00000156136 CDS Human protein_coding chr4:71895097 chr4:71895099 nonsynonymous SNV 0.128 2 23 hm5C_associated_SNPs_112700 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:71895066-71895131
64251 chr17 7577130 7577130 1 - A T BRCA 7577134 - 7577114 7577154 41 GGTAATCTACTGGGACGGAACAGCTTTGAGGTGCGTGTTTG GGTAATCTACTGGGACGGAACAGCATTGAGGTGCGTGTTTG < 41bp 0.607100435334681 0.843211307617165 0.18253559 0.16391274 prediction 0.472221744564967 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577134 chr17:7577130 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_112701 9 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7577102-7577135
64251 chr10 89717691 89717691 1 + T G GBM 89717689 + 89717669 89717709 41 ACACGACGGGAAGACAAGTTCATGTACTTTGAGTTCCCTCA ACACGACGGGAAGACAAGTTCAGGTACTTTGAGTTCCCTCA < 41bp 0.390012488415355 0.736106545775737 0.12745366 0.63060904 prediction 0.472213091551473 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89717689 chr10:89717691 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_112703 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:89717689-89717708
64251 chr13 32783101 32783101 1 + C A THCA 32783100 + 32783080 32783120 41 TGGACAGCAGGCTCCTCCTCCCGGGGTCGAGCCCCAGCAGC TGGACAGCAGGCTCCTCCTCCAGGGGTCGAGCCCCAGCAGC < 41bp 0.510920082769441 0.747025667631172 0.93476015 0.927131 prediction 0.472211169723462 Functional Gain - FRY ENSG00000073910 CDS Human protein_coding chr13:32783100 chr13:32783101 nonsynonymous SNV 0.638 1 22 hm5C_associated_SNPs_112704 0 0 3 EIF3H POSTAR2 ENCODE chr13:32783080-32783186
64251 chr2 183621060 183621060 1 + T G SKCM 183621057 + 183621037 183621077 41 TCAGGATCTTATGAATCCTTCAGTGGTCTCCCTTACACCCA TCAGGATCTTATGAATCCTTCAGGGGTCTCCCTTACACCCA < 41bp 0.35384859518812 0.736096954455271 0.598381 0.93993485 prediction 0.472193908910543 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183621057 chr2:183621060 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_112705 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:183621049-183621072
64251 chr17 17697038 17697038 1 + C A UVM 17697037 + 17697017 17697057 41 CTGCCAGCTCCAGCCTGGCCCCGGGGCAGCGGGTCCAGAAT CTGCCAGCTCCAGCCTGGCCCAGGGGCAGCGGGTCCAGAAT < 41bp 0.470331446002226 0.736091095983986 0.8561251 0.9168813 prediction 0.472182191967972 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697037 chr17:17697038 nonsynonymous SNV 0.575 3 22 hm5C_associated_SNPs_112707 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17697019-17697040
64251 chr12 133291604 133291604 1 + C T ESCA 133291603 + 133291583 133291623 41 GATGGCTCCCTGGAGAAGGACCGCACTCTGACCCCGCTGGG GATGGCTCCCTGGAGAAGGACTGCACTCTGACCCCGCTGGG < 41bp 0.550743109210113 0.786824925025671 0.048166573 0.21159413 prediction 0.472163631631116 Functional Gain - PGAM5 ENSG00000176894;ENSG00000247077 CDS Human other chr12:133291603 chr12:133291604 nonsynonymous SNV 0.992 0 22 hm5C_associated_SNPs_112708 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:133291535-133291610
64251 chr13 113773002 113773002 1 + A G DLBC 113772999 + 113772979 113773019 41 CGGCCCTGGAGCTCATGGTCCTCAACGTGCCCCGGCTGATG CGGCCCTGGAGCTCATGGTCCTCGACGTGCCCCGGCTGATG < 41bp 0.535870441489551 0.771941088095234 0.058579475 0.07363325 prediction 0.472141293211366 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113772999 chr13:113773002 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_112717 0 0 2 RPS3 POSTAR2 ENCODE chr13:113772945-113773029
64251 chr5 170863172 170863172 1 + C T STAD 170863171 + 170863151 170863191 41 CGGGCTCGGGACGATGTGAGCCGTAAGCAGCTGCGGCTGTA CGGGCTCGGGACGATGTGAGCTGTAAGCAGCTGCGGCTGTA < 41bp 0.506445406197868 0.742514264178354 0.7662184 0.4696161 prediction 0.472137715960973 Functional Gain - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170863171 chr5:170863172 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_112719 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:170863129-170863174
64251 chr13 48832368 48832368 1 + T C LIHC 48832366 + 48832346 48832386 41 CTACTGGAGTTACTTATTAACATCAAGGTATAAGAATGTTG CTACTGGAGTTACTTATTAACACCAAGGTATAAGAATGTTG < 41bp 0.454674720973587 0.736067736490357 0.04850778 0.043183357 prediction 0.472135472980713 Functional Gain - ITM2B ENSG00000136156 CDS Human protein_coding chr13:48832366 chr13:48832368 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_112720 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:48832328-48832370
64251 chr10 104486489 104486489 1 + C A rs35153373 104486485 + 104486465 104486505 41 GAAGCACTTCCTAAACATCACGGACCCCCGCACTGTCTTTG GAAGCACTTCCTAAACATCACGGAACCCCGCACTGTCTTTG < 41bp 0.319146016009606 0.73606313408146 0.0660961 0.27058944 prediction 0.472126268162919 Functional Gain - SFXN2 ENSG00000156398 CDS Human protein_coding chr10:104486485 chr10:104486489 nonsynonymous SNV 0.847 4 25 hm5C_associated_SNPs_112721 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917666 chr10:104486468-104486494
64251 chr6 345903 345903 1 + C T UCEC 345902 + 345882 345922 41 TTCATTCACGAGTGCCGGCTCCGCGGTGAGAGCTGCCTTGT TTCATTCACGAGTGCCGGCTCTGCGGTGAGAGCTGCCTTGT < 41bp 0.484455320837136 0.736059236786617 0.2604453 0.15701485 prediction 0.472118473573233 Functional Gain - DUSP22 ENSG00000112679 CDS Human protein_coding chr6:345902 chr6:345903 nonsynonymous SNV 0.458 2 22 hm5C_associated_SNPs_112722 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:345874-345904
64251 chr15 44092137 44092137 1 + C A COAD 44092136 + 44092116 44092156 41 GCCTCCGCTGTGCTGCTGTGCCAGGCCCAGGGAGGTGCCGG GCCTCCGCTGTGCTGCTGTGCAAGGCCCAGGGAGGTGCCGG < 41bp 0.499895255878795 0.736042854158206 0.4965752 0.41447914 prediction 0.472085708316412 Functional Gain - SERINC4 ENSG00000184716 CDS Human protein_coding chr15:44092136 chr15:44092137 synonymous SNV . 0 22 hm5C_associated_SNPs_112729 0 0 1 RBM15 POSTAR2 ENCODE chr15:44092101-44092173
64251 chr16 10851831 10851831 1 + C T SKCM 10851830 + 10851810 10851850 41 GATGAACACCTCTCGGTCGTCCGGTACCTGGCCACAGCACA GATGAACACCTCTCGGTCGTCTGGTACCTGGCCACAGCACA < 41bp 0.49022496718724 0.736039442475642 0.59872097 0.54403794 prediction 0.472078884951284 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10851830 chr16:10851831 nonsynonymous SNV 0.698 2 22 hm5C_associated_SNPs_112732 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:10851820-10851840
64251 chr1 26603636 26603636 1 + C A SARC 26603635 + 26603615 26603655 41 TCTCCCCAGCAGCACAGCACCCAGAGACTCAGCTAGATTTG TCTCCCCAGCAGCACAGCACCAAGAGACTCAGCTAGATTTG < 41bp 0.549191527669364 0.785214315454492 0.22837004 0.49407768 prediction 0.472045575570256 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26603635 chr1:26603636 nonsynonymous SNV 0.963 2 22 hm5C_associated_SNPs_112737 0 0 5 SF3B1 POSTAR2 ENCODE chr1:26603612-26603647
64251 chr19 5131539 5131539 1 + C G rs201365136 5131538 + 5131518 5131558 41 GGTCGCATGGAGACCAAAGCCCGGGCCGGAGAGGGGCAGGT GGTCGCATGGAGACCAAAGCCGGGGCCGGAGAGGGGCAGGT < 41bp 0.620719327438891 0.856737417821296 0.447806 0.8901935 prediction 0.472036180764809 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5131538 chr19:5131539 nonsynonymous SNV 0.011 0 22 hm5C_associated_SNPs_112740 0 0 1 FXR2 POSTAR2 ENCODE chr19:5131463-5131548
64251 chr4 88902856 88902856 1 + T A COAD 88902852 + 88902832 88902872 41 CAGCAACCGAAGTTTTCACTCCAGTTGTCCCCACAGTAGAC CAGCAACCGAAGTTTTCACTCCAGATGTCCCCACAGTAGAC < 41bp 0.416568086871733 0.736017779996175 0.32896638 0.61364025 prediction 0.472035559992351 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88902852 chr4:88902856 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_112741 0 0 5 GRWD1 POSTAR2 ENCODE chr4:88902814-88902885
64251 chr2 75874015 75874015 1 + C A rs11552948 75874014 + 75873994 75874034 41 GCCGCCAGGACTCTGCTCCCCCCGCCGGCCTCTATCGCCTG GCCGCCAGGACTCTGCTCCCCACGCCGGCCTCTATCGCCTG < 41bp 0.50519711306644 0.741203797923789 0.019164294 0.07452378 prediction 0.472013369714699 Functional Gain - MRPL19 ENSG00000115364 CDS Human protein_coding chr2:75874014 chr2:75874015 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_112748 0 0 6 DDX3X POSTAR2 ENCODE chr2:75873967-75874031
64251 chr2 219619127 219619127 1 + A G rs147710885 219619124 + 219619104 219619144 41 AGCCCATAACTGGCCTCTCTCCAAAAGCCTCTGCCCAGGAG AGCCCATAACTGGCCTCTCTCCAGAAGCCTCTGCCCAGGAG < 41bp 0.504073418525786 0.740079691366385 0.40703905 0.91702294 prediction 0.472012545681198 Functional Gain - TTLL4 ENSG00000135912 UTR3 Human protein_coding chr2:219619124 chr2:219619127 . . 0 24 hm5C_associated_SNPs_112749 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:219619120-219619140
64251 chr22 39910211 39910211 1 + C G UCEC 39910210 + 39910190 39910230 41 CTTAGAGGCTGGAGTCCTGCCCAGTGCCCTAAACCCCAAGG CTTAGAGGCTGGAGTCCTGCCGAGTGCCCTAAACCCCAAGG < 41bp 0.415904432680332 0.736002778382511 0.1895352 0.41252768 prediction 0.472005556765021 Functional Gain - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39910210 chr22:39910211 synonymous SNV . 0 22 hm5C_associated_SNPs_112751 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39910188-39910218
64251 chr3 50685441 50685441 1 + C G KIRP 50685437 + 50685417 50685457 41 CAAGAGGAGAAAAAAGCAGGCAGGCAGCTCCTCTGCCTCAC CAAGAGGAGAAAAAAGCAGGCAGGGAGCTCCTCTGCCTCAC < 41bp 0.45141939024037 0.73599842597176 0.5158604 0.8910249 prediction 0.471996851943519 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50685437 chr3:50685441 synonymous SNV . 0 25 hm5C_associated_SNPs_112752 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:50685425-50685459
64251 chr15 67813876 67813876 1 - G T UCEC 67813880 - 67813860 67813900 41 CGGTTCTGCCGGGCCAGGTCCTGCCAGGGAGCCTTGGAGCA CGGTTCTGCCGGGCCAGGTCCTGCAAGGGAGCCTTGGAGCA < 41bp 0.329405640906561 0.735998082491743 0.38108867 0.7927594 prediction 0.471996164983485 Functional Gain - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67813880 chr15:67813876 nonsynonymous SNV 0.948 0 25 hm5C_associated_SNPs_112753 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:67813860-67813880
64251 chr1 149858584 149858584 1 + C G SKCM 149858583 + 149858563 149858603 41 CAAGGCCAAGTCGCGCTCGTCCCGCGCTGGCCTCCAGTTCC CAAGGCCAAGTCGCGCTCGTCGCGCGCTGGCCTCCAGTTCC < 41bp 0.623031406174003 0.859020216845751 0.036165565 0.06706828 prediction 0.471977621343496 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858583 chr1:149858584 synonymous SNV . 0 22 hm5C_associated_SNPs_112755 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:149858560-149858620
64251 chr19 41826329 41826329 1 + A G LGG 41826326 + 41826306 41826346 41 TGCGAGAGGAGTTCACCAGCCGCATGCACCAGCGCTTCCTA TGCGAGAGGAGTTCACCAGCCGCGTGCACCAGCGCTTCCTA < 41bp 0.50742548178106 0.743394921452665 0.21890616 0.3567463 prediction 0.47193887934321 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41826326 chr19:41826329 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_112762 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:41826329-41826365
64251 chr16 68849604 68849604 1 + C T BLCA 68849603 + 68849583 68849623 41 TCCGAGGACTTTGGCGTGGGCCAGGAAATCACATCCTACAC TCCGAGGACTTTGGCGTGGGCTAGGAAATCACATCCTACAC < 41bp 0.512839742281402 0.748797105051933 0.20216629 0.06658581 prediction 0.471914725541062 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68849603 chr16:68849604 stopgain 0.485 0 22 hm5C_associated_SNPs_112766 0 0 2 SND1 POSTAR2 ENCODE chr16:68849576-68849649
64251 chr3 45533060 45533060 1 + C T UCEC 45533059 + 45533039 45533079 41 CTAGCCCTGACTCAGAAAGCCCGGGGGAAGAGAGTGGGTGG CTAGCCCTGACTCAGAAAGCCTGGGGGAAGAGAGTGGGTGG < 41bp 0.527319974590444 0.76327394014035 0.68958545 0.5797084 prediction 0.471907931099811 Functional Gain - LARS2 ENSG00000011376 CDS Human protein_coding chr3:45533059 chr3:45533060 nonsynonymous SNV 0.968 4 22 hm5C_associated_SNPs_112769 0 0 2 FXR2 POSTAR2 ENCODE chr3:45533017-45533084
64251 chr1 163325197 163325197 1 + T A COAD 163325193 + 163325173 163325213 41 ATTGAAAAGGCAGCAGAGGACTCCTATGCTAAGATAGATGA ATTGAAAAGGCAGCAGAGGACTCCAATGCTAAGATAGATGA < 41bp 0.651326777035747 0.887280474962043 0.13255903 0.91925275 prediction 0.471907395852592 Functional Gain - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163325193 chr1:163325197 nonsynonymous SNV 0.066 0 25 hm5C_associated_SNPs_112770 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:163325178-163325233
64251 chr14 105931031 105931031 1 + C T SKCM 105931030 + 105931010 105931050 41 GAGTCCCCACGGCCTCCCAGCCCGGAGCAGCGGGAGCCCCA GAGTCCCCACGGCCTCCCAGCTCGGAGCAGCGGGAGCCCCA < 41bp 0.548270130071943 0.784208762395432 0.31291473 0.39051586 prediction 0.471877264646978 Functional Gain - MTA1 ENSG00000182979 CDS Human protein_coding chr14:105931030 chr14:105931031 synonymous SNV . 0 22 hm5C_associated_SNPs_112772 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917673 chr14:105931012-105931034
64251 chr17 27064895 27064895 1 + C A STAD 27064894 + 27064874 27064914 41 ACCACTGTCGTCAGTGTATGCCTGGGGTGGTGGGCTGGGCA ACCACTGTCGTCAGTGTATGCATGGGGTGGTGGGCTGGGCA < 41bp 0.562822867117272 0.798752761242631 0.4875035 0.41393328 prediction 0.471859788250718 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27064894 chr17:27064895 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_112778 0 0 1 PPIG POSTAR2 ENCODE chr17:27064845-27064934
64251 chr1 29070013 29070013 1 + C A GBM 29070012 + 29069992 29070032 41 GACTGGAATCTGAAACATGGCCGGGTTTTCATCATTAAGAG GACTGGAATCTGAAACATGGCAGGGTTTTCATCATTAAGAG < 41bp 0.489069163847688 0.735925805768885 0.13642338 0.20076409 prediction 0.471851611537771 Functional Gain - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29070012 chr1:29070013 synonymous SNV . 0 22 hm5C_associated_SNPs_112780 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:29069839-29070065
64251 chr7 141464283 141464283 1 + C G COAD 141464279 + 141464259 141464299 41 ACCTGTCTTGGTGTCCTCTACTGCCTGAAAATCGCCAGTTT ACCTGTCTTGGTGTCCTCTACTGCGTGAAAATCGCCAGTTT < 41bp 0.603912607635241 0.839835524095394 0.3126564 0.33087325 prediction 0.471845832920307 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464279 chr7:141464283 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_112782 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:141464263-141464285
64251 chr2 28631707 28631707 1 + C T STAD 28631706 + 28631686 28631726 41 GCCAAGTGCCGGAACCGACGCCGGGAGCTGACAGAGAAGCT GCCAAGTGCCGGAACCGACGCTGGGAGCTGACAGAGAAGCT < 41bp 0.525114360019498 0.761031190473682 0.8556969 0.5511321 prediction 0.471833660908367 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28631706 chr2:28631707 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_112783 0 0 3 BUD13 POSTAR2 ENCODE chr2:28631621-28631709
64251 chr1 32049126 32049126 1 + C T ESCA 32049125 + 32049105 32049145 41 GATGAGGGCATTCGCTACCGCCTGGGCACCATCCGCCCATC GATGAGGGCATTCGCTACCGCTTGGGCACCATCCGCCCATC < 41bp 0.487683563906317 0.73591402653099 0.14774898 0.078311 prediction 0.47182805306198 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32049125 chr1:32049126 synonymous SNV . 0 22 hm5C_associated_SNPs_112784 0 0 1 PPIG POSTAR2 ENCODE chr1:32049060-32049156
64251 chr11 13721892 13721892 1 + C T SKCM 13721891 + 13721871 13721911 41 ACAGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATT ACAGATTGAGAGATGAAAATCTAGATTTTAGAGAGAAAATT < 41bp 0.515043193098265 0.750942707234281 0.12128723 0.07726222 prediction 0.471799028272031 Functional Gain - FAR1 ENSG00000197601 CDS Human protein_coding chr11:13721891 chr11:13721892 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112786 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:13721866-13721892
64251 chr16 90001343 90001343 1 + C T COAD 90001342 + 90001322 90001362 41 GTGCGTGAGGAGTATCCCGACCGCATCATGAACACCTTCAG GTGCGTGAGGAGTATCCCGACTGCATCATGAACACCTTCAG < 41bp 0.547515537080287 0.783407872098824 0.26970828 0.13584921 prediction 0.471784670037073 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001342 chr16:90001343 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_112789 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:90001307-90001345
64251 chr9 990745 990745 1 + A G UCEC 990742 + 990722 990762 41 GCCAGTCGAGCCCCTTTTTGCCCAATGATGTCACCCTGTGG GCCAGTCGAGCCCCTTTTTGCCCGATGATGTCACCCTGTGG < 41bp 0.534056649187338 0.769946708813499 0.08226064 0.087667674 prediction 0.471780119252321 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990742 chr9:990745 nonsynonymous SNV 0.983 3 24 hm5C_associated_SNPs_112790 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:990741-990771
64251 chr11 59834493 59834493 1 + C G LUAD 59834489 + 59834469 59834509 41 CTAGTGGGGACTGCTTTTCTCTCACTAAATATAGCAGTTAA CTAGTGGGGACTGCTTTTCTCTCAGTAAATATAGCAGTTAA < 41bp 0.452253999618619 0.735885887052786 0.014855266 0.0799655 prediction 0.471771774105571 Functional Gain - MS4A3 ENSG00000149516 CDS Human protein_coding chr11:59834489 chr11:59834493 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_112792 0 0 1 SND1 POSTAR2 ENCODE chr11:59834438-59834501
64251 chr3 15084500 15084500 1 + C T UCEC 15084499 + 15084479 15084519 41 AGAGTATAATGGCCAGATCACCGGAGCCAGTCTATAGCGCA AGAGTATAATGGCCAGATCACTGGAGCCAGTCTATAGCGCA < 41bp 0.497584548528942 0.7358847787126 0.55475414 0.3932985 prediction 0.4717695574252 Functional Gain - NR2C2 ENSG00000177463 CDS Human protein_coding chr3:15084499 chr3:15084500 synonymous SNV . 0 22 hm5C_associated_SNPs_112793 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:15084464-15084509
64251 chr16 71884209 71884209 1 + C A rs77031689 71884208 + 71884188 71884228 41 CTGAAGGAGCCACTCCTCCCCCACAGGCTCCCTCCCCGGCC CTGAAGGAGCCACTCCTCCCCAACAGGCTCCCTCCCCGGCC < 41bp 0.550499501093232 0.786373459064046 0.0072577894 0.0125109255 prediction 0.471747915941626 Functional Gain - ATXN1L ENSG00000224470 CDS Human protein_coding chr16:71884208 chr16:71884209 nonsynonymous SNV 0.639 3 22 hm5C_associated_SNPs_112796 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:71884168-71884211
64251 chr1 206566186 206566186 1 + C T BLCA 206566185 + 206566165 206566205 41 GACCCCACGCTCCCCTGACTCCACGGCCAACGTTCGCATTG GACCCCACGCTCCCCTGACTCTACGGCCAACGTTCGCATTG < 41bp 0.563315191011417 0.799173497317354 0.9015777 0.90456486 prediction 0.471716612611875 Functional Gain - SRGAP2 ENSG00000163486 CDS Human other chr1:206566185 chr1:206566186 synonymous SNV . 0 22 hm5C_associated_SNPs_112799 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:206566170-206566192
64251 chrX 118123451 118123451 1 + T A LUAD 118123447 + 118123427 118123467 41 TGGCAGCAGTCTGATGGACCCAGCTAAAGTGAAGGGGGATG TGGCAGCAGTCTGATGGACCCAGCAAAAGTGAAGGGGGATG < 41bp 0.419644523946993 0.735829631550786 0.33311802 0.6513387 prediction 0.471659263101572 Functional Gain - LONRF3 ENSG00000175556 CDS Human protein_coding chrX:118123447 chrX:118123451 synonymous SNV . 0 25 hm5C_associated_SNPs_112806 0 0 1 RBM15 POSTAR2 ENCODE chrX:118123415-118123588
64251 chr19 44721973 44721973 1 + C T COAD 44721972 + 44721952 44721992 41 TCTCAGAACTATGACCTTCCCCAGAAGAAGCAGGAGAAAAT TCTCAGAACTATGACCTTCCCTAGAAGAAGCAGGAGAAAAT < 41bp 0.535940663858941 0.771758312194008 0.3260256 0.21187505 prediction 0.471635296670134 Functional Gain - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44721972 chr19:44721973 stopgain 0.445 0 22 hm5C_associated_SNPs_112813 0 0 7 FBL POSTAR2 GSE43666,GSM1067865 chr19:44721946-44721982
64251 chr19 50157674 50157674 1 + C G ACC 50157673 + 50157653 50157693 41 GCGAAGGCCCAGGAGCTGATCCAGGCCACCAACCAGGTGGG GCGAAGGCCCAGGAGCTGATCGAGGCCACCAACCAGGTGGG < 41bp 0.42243279219408 0.73581588608091 0.90628386 0.9272727 prediction 0.471631772161821 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50157673 chr19:50157674 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112814 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:50157655-50157676
64251 chr15 75074508 75074508 1 + C G rs528173704 75074504 + 75074484 75074524 41 GCCGAGGTTGGCCGCCGCCGCCGCCGAGCCCGCTGCCGCCC GCCGAGGTTGGCCGCCGCCGCCGCGGAGCCCGCTGCCGCCC < 41bp 0.603687153772234 0.839500581910058 0.88578606 0.87832224 prediction 0.47162685627565 Functional Gain - CSK ENSG00000103653 UTR5 Human protein_coding chr15:75074504 chr15:75074508 . . 0 25 hm5C_associated_SNPs_112815 0 0 5 DDX3X POSTAR2 ENCODE chr15:75074463-75074524
64251 chr17 35783653 35783653 1 + C A SKCM 35783649 + 35783629 35783669 41 CCTTGCCGAGGCTGCTCCTCCTACCTCATGGAGCCTTATAT CCTTGCCGAGGCTGCTCCTCCTACATCATGGAGCCTTATAT < 41bp 0.299574690815897 0.735803074452517 0.074640304 0.3906431 prediction 0.471606148905034 Functional Gain - TADA2A ENSG00000108264 CDS Human other chr17:35783649 chr17:35783653 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_112816 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:35783642-35783663
64251 chr20 42264576 42264576 1 + C G LGG 42264572 + 42264552 42264592 41 GATTATGAACACAGGGCTCACGAGCAGCTAAATGTGAAACA GATTATGAACACAGGGCTCACGAGGAGCTAAATGTGAAACA < 41bp 0.449953156495133 0.735800889900386 0.19781232 0.7196778 prediction 0.471601779800771 Functional Gain - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42264572 chr20:42264576 nonsynonymous SNV 0.964 0 25 hm5C_associated_SNPs_112818 0 0 2 YBX3 POSTAR2 ENCODE chr20:42264565-42264595
64251 chr6 35254164 35254164 1 + C T UCEC 35254163 + 35254143 35254183 41 GGCAGCATGGCTTACATACACCGCACACCCAGAGGTAGGGT GGCAGCATGGCTTACATACACTGCACACCCAGAGGTAGGGT < 41bp 0.551796730367897 0.787583436871217 0.079841554 0.08945447 prediction 0.47157341300664 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35254163 chr6:35254164 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_112824 0 0 2 BUD13 POSTAR2 ENCODE chr6:35254115-35254177
64251 chr19 39214837 39214837 1 + C T STAD 39214836 + 39214816 39214856 41 ACCAGTTCAAGTCCACCCTGCCGGACGCCGATAGGGAGCGC ACCAGTTCAAGTCCACCCTGCTGGACGCCGATAGGGAGCGC < 41bp 0.556501794796379 0.792283706677496 0.068210125 0.15622684 prediction 0.471563823762233 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39214836 chr19:39214837 nonsynonymous SNV 0.092 1 22 hm5C_associated_SNPs_112826 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:39214815-39214846
64251 chr1 110032729 110032729 1 + C T SKCM 110032728 + 110032708 110032748 41 CCCTGACTGCCATTATGCAACCCGGCCCCCACGGCCACAGG CCCTGACTGCCATTATGCAACTCGGCCCCCACGGCCACAGG < 41bp 0.500276349384682 0.73605089904172 0.09472692 0.040377557 prediction 0.471549099314076 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110032728 chr1:110032729 synonymous SNV . 0 22 hm5C_associated_SNPs_112829 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:110032716-110032740
64251 chr17 10608272 10608272 1 + T G rs549050775 10608269 + 10608249 10608289 41 TGATAAACCCAATCCTGAAGCCCTAAGTGACAGTTCAGAGC TGATAAACCCAATCCTGAAGCCCGAAGTGACAGTTCAGAGC < 41bp 0.353377408118408 0.735770049629456 0.10338071 0.056290537 prediction 0.471540099258913 Functional Gain - ADPRM ENSG00000170222 CDS Human protein_coding chr17:10608269 chr17:10608272 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_112831 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:10608272-10608273
64251 chr10 82187109 82187109 1 + A G UCEC 82187106 + 82187086 82187126 41 AGAAAAAGTTCTATGGTCCACAAAGGCGGAAGATGATGTTT AGAAAAAGTTCTATGGTCCACAAGGGCGGAAGATGATGTTT < 41bp 0.503042013006501 0.738775297748358 0.25127783 0.45266777 prediction 0.471466569483714 Functional Gain - FAM213A ENSG00000122378 CDS Human protein_coding chr10:82187106 chr10:82187109 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_112846 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:82187091-82187156
64251 chr14 23945564 23945564 1 + C T COAD 23945563 + 23945543 23945583 41 TCAGATGCTCCAGAGGAAATCCGTGATGCTCGGCATCCCCA TCAGATGCTCCAGAGGAAATCTGTGATGCTCGGCATCCCCA < 41bp 0.49014571012383 0.735733043737764 0.38179642 0.3381354 prediction 0.471466087475528 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23945563 chr14:23945564 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112847 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:23945543-23945577
64251 chr1 36788037 36788037 1 + C A LGG 36788036 + 36788016 36788056 41 CTCCAGCCGCTGCGCCCGCTCCAGCTCCTCCGCCGACGTGA CTCCAGCCGCTGCGCCCGCTCAAGCTCCTCCGCCGACGTGA < 41bp 0.485196848227384 0.735731392754402 0.5164141 0.51402175 prediction 0.471462785508804 Functional Gain - EVA1B ENSG00000142694 CDS Human protein_coding chr1:36788036 chr1:36788037 synonymous SNV . 0 22 hm5C_associated_SNPs_112848 0 0 1 SLTM POSTAR2 ENCODE chr1:36788023-36788053
64251 chr1 33944933 33944933 1 + C A LUSC 33944932 + 33944912 33944952 41 AAGCCCAGGCATCTCCGCAGCCAGAGCCTGAAGAACTCCTG AAGCCCAGGCATCTCCGCAGCAAGAGCCTGAAGAACTCCTG < 41bp 0.554204782320701 0.789931115554769 0.49051535 0.30559188 prediction 0.471452666468136 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33944932 chr1:33944933 nonsynonymous SNV 0.594 0 22 hm5C_associated_SNPs_112850 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:33944929-33944950
64251 chr7 155255257 155255257 1 + C T STAD 155255256 + 155255236 155255276 41 TCACAGATCAAGATTTGGTTCCAGAACAAGCGCGCCAAGAT TCACAGATCAAGATTTGGTTCTAGAACAAGCGCGCCAAGAT < 41bp 0.53590425599648 0.771625629621827 0.40959027 0.18876114 prediction 0.471442747250694 Functional Gain - EN2 ENSG00000164778 CDS Human protein_coding chr7:155255256 chr7:155255257 stopgain 1.000 1 22 hm5C_associated_SNPs_112853 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:155255222-155255258
64251 chr20 25257371 25257371 1 + C G LUSC 25257367 + 25257347 25257387 41 GCGGCTGTGGTCCGCCAAGGCTCCCAACGACTTCAAGCTGC GCGGCTGTGGTCCGCCAAGGCTCCGAACGACTTCAAGCTGC < 41bp 0.437489783710993 0.735712220350418 0.038571388 0.04796645 prediction 0.471424440700837 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25257367 chr20:25257371 synonymous SNV . 0 25 hm5C_associated_SNPs_112854 0 0 1 RPS3 POSTAR2 ENCODE chr20:25257308-25257372
64251 chr8 6616071 6616071 1 + A G rs3811118 6616068 + 6616048 6616088 41 GTGGGCTTCACCAGCTACTGCAGAGGCATTTTGCATTTGTC GTGGGCTTCACCAGCTACTGCAGGGGCATTTTGCATTTGTC < 41bp 0.493593503218061 0.735698633222031 0.516516 0.85144687 prediction 0.471397266444062 Functional Gain - AGPAT5 ENSG00000155189 UTR3 Human protein_coding chr8:6616068 chr8:6616071 . . 0 24 hm5C_associated_SNPs_112857 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr8:6616044-6616077
64251 chr19 3198864 3198864 1 + T C UCEC 3198862 + 3198842 3198882 41 GACCTTCCCACCATCGTCATCGTGGCCCACTACGACGCCTT GACCTTCCCACCATCGTCATCGCGGCCCACTACGACGCCTT < 41bp 0.544930544031084 0.780627822815732 0.90584654 0.90590376 prediction 0.471394557569295 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3198862 chr19:3198864 nonsynonymous SNV 0.082 2 23 hm5C_associated_SNPs_112858 0 0 6 FUS POSTAR2 DRA001158,DRS012384 chr19:3198842-3198875
64251 chr3 50138019 50138019 1 - G T SARC 50138023 - 50138003 50138043 41 GCAACCTGATTGGCTTCCATCCAGCTGGTAGCATCTTGCAA GCAACCTGATTGGCTTCCATCCAGATGGTAGCATCTTGCAA < 41bp 0.349371238853569 0.735696164288909 0.32241288 0.35124373 prediction 0.471392328577818 Functional Gain - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50138023 chr3:50138019 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_112859 0 0 1 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50137960-50138020
64251 chr2 192252060 192252060 1 + C T LUAD 192252059 + 192252039 192252079 41 CCTCATCAAGTCTTTGTTCCCCGAAGGGAATCCCGCCAAGA CCTCATCAAGTCTTTGTTCCCTGAAGGGAATCCCGCCAAGA < 41bp 0.559137303709457 0.794833272409815 0.31154054 0.24184743 prediction 0.471391937400715 Functional Gain - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192252059 chr2:192252060 synonymous SNV . 0 22 hm5C_associated_SNPs_112860 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:192252040-192252060
64251 chr16 68389763 68389763 1 + C G rs140260314 68389762 + 68389742 68389782 41 GCCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCA GCCCCTGCAGCCCCTGTGTGCGGAGGGCACCGTGGAGCTCA < 41bp 0.63829267250431 0.873978871004076 0.8640574 0.90766776 prediction 0.471372396999531 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68389762 chr16:68389763 synonymous SNV . 0 22 hm5C_associated_SNPs_112865 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003589 chr16:68389756-68389777
64251 chr4 1733024 1733024 1 + T A HNSC 1733020 + 1733000 1733040 41 AGAGGAGAGCTTCAGAGACCCCGCTGAGGGTACGTTGCCTG AGAGGAGAGCTTCAGAGACCCCGCAGAGGGTACGTTGCCTG < 41bp 0.406395302301452 0.735680406482179 0.09048402 0.12481144 prediction 0.471360812964357 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1733020 chr4:1733024 synonymous SNV . 0 25 hm5C_associated_SNPs_112868 0 0 4 FXR2 POSTAR2 ENCODE chr4:1732977-1733028
64251 chr20 39983347 39983347 1 + C T SKCM 39983346 + 39983326 39983366 41 GGGTGGGCGATGGTGGTTTTCCTGGCGACGCAGGGACTTCC GGGTGGGCGATGGTGGTTTTCTTGGCGACGCAGGGACTTCC < 41bp 0.484298469107585 0.73567428501664 0.8102652 0.32299086 prediction 0.471348570033281 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39983346 chr20:39983347 synonymous SNV . 0 22 hm5C_associated_SNPs_112869 0 0 1 PPIG POSTAR2 ENCODE chr20:39983341-39983377
64251 chr20 2633563 2633563 1 + C G rs116445545 2633559 + 2633539 2633579 41 CTGAAGGAAGTGGAGGAGATCAGTCTGCTGCAGCCGCAGGT CTGAAGGAAGTGGAGGAGATCAGTGTGCTGCAGCCGCAGGT < 41bp 0.60071184942954 0.836385963072025 0.7707553 0.82846344 prediction 0.471348227284971 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2633559 chr20:2633563 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_112871 0 0 11 RTCB POSTAR2 GSE38201,GSM936508 chr20:2633541-2633563
64251 chr19 35757312 35757312 1 + C T UCEC 35757311 + 35757291 35757331 41 GGTGTTCCCAGCATTTATGCCCCCAGCACCTATGCCCACCT GGTGTTCCCAGCATTTATGCCTCCAGCACCTATGCCCACCT < 41bp 0.579639067314393 0.815311508640169 0.061720192 0.94140047 prediction 0.471344882651551 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35757311 chr19:35757312 nonsynonymous SNV 0.980 3 22 hm5C_associated_SNPs_112872 0 0 1 PCBP2 POSTAR2 ENCODE chr19:35757294-35757403
64251 chr9 36199092 36199092 1 + T C LGG 36199090 + 36199070 36199110 41 AAATGGAACGCTTGGAAGCCCTTGGTAAGGAATCCCTTCTG AAATGGAACGCTTGGAAGCCCTCGGTAAGGAATCCCTTCTG < 41bp 0.580862920176951 0.816531850109898 0.26744866 0.2586398 prediction 0.471337859865893 Functional Gain - CLTA ENSG00000122705 CDS Human protein_coding chr9:36199090 chr9:36199092 synonymous SNV . 0 23 hm5C_associated_SNPs_112875 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr9:36198973-36199093
64251 chr20 48808011 48808011 1 + C G rs4253439 48808010 + 48807990 48808030 41 GAGCCTGGGGCGCCTGGGGGCCGCCAAGGGCGCGCTGCACC GAGCCTGGGGCGCCTGGGGGCGGCCAAGGGCGCGCTGCACC < 41bp 0.427473960755873 0.735658579013879 0.8686309 0.8892648 prediction 0.471317158027758 Functional Gain - CEBPB ENSG00000172216 CDS Human protein_coding chr20:48808010 chr20:48808011 synonymous SNV . 0 22 hm5C_associated_SNPs_112877 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:48807988-48808012
64251 chr1 160326852 160326852 1 + C T SKCM 160326851 + 160326831 160326871 41 CTGTATGAGTACTCATGGGTCCAGGGCCCTTTGCATTCTAA CTGTATGAGTACTCATGGGTCTAGGGCCCTTTGCATTCTAA < 41bp 0.51095918327013 0.746615615606811 0.19832274 0.18075824 prediction 0.471312864673362 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160326851 chr1:160326852 stopgain 0.954 1 22 hm5C_associated_SNPs_112879 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:160326805-160326902
64251 chr3 5025215 5025215 1 + C T UCEC 5025214 + 5025194 5025234 41 CCCAGGCCTCAACGCCTCTGCCGCAGCCCTCTCTAGCTTCA CCCAGGCCTCAACGCCTCTGCTGCAGCCCTCTCTAGCTTCA < 41bp 0.550429055764738 0.786082264520369 0.020887852 0.014629275 prediction 0.471306417511262 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5025214 chr3:5025215 synonymous SNV . 0 22 hm5C_associated_SNPs_112881 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:5025199-5025228
64251 chr19 45848858 45848858 1 + C A UCEC 45848857 + 45848837 45848877 41 TGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAG TGGGCCCAGAGCGCCTGAGCCATGAGGAGCTGGTGCGGCAG < 41bp 0.552201309566639 0.787852460878366 0.26529276 0.475773 prediction 0.471302302623456 Functional Gain - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45848857 chr19:45848858 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_112883 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:45848845-45848887
64251 chr3 182631701 182631701 1 + C T COAD 182631700 + 182631680 182631720 41 TGGACTCCATGTGCTGTTTCCCGGAAGGAGAAGCAGCGTGT TGGACTCCATGTGCTGTTTCCTGGAAGGAGAAGCAGCGTGT < 41bp 0.550737443711446 0.786380999019479 0.7976246 0.49493393 prediction 0.471287110616066 Functional Gain - ATP11B ENSG00000058063 CDS Human protein_coding chr3:182631700 chr3:182631701 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_112885 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:182631677-182631702
64251 chr1 165624685 165624685 1 + C A HNSC 165624684 + 165624664 165624704 41 ACAACTGTGTGCTCTGCTTTCCAGCATCTTGGTTGGGTTAA ACAACTGTGTGCTCTGCTTTCAAGCATCTTGGTTGGGTTAA < 41bp 0.547264529003866 0.782903163580646 0.5510859 0.7735482 prediction 0.47127726915356 Functional Gain - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165624684 chr1:165624685 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_112888 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:165624611-165624727
64251 chr10 101515451 101515451 1 + C A LUAD 101515450 + 101515430 101515470 41 CCTAAAGGTAACAGATGTGACCAAAGTAAGGACTTTGAATG CCTAAAGGTAACAGATGTGACAAAAGTAAGGACTTTGAATG < 41bp 0.533934488348373 0.769564389631066 0.106695 0.28401488 prediction 0.471259802565387 Functional Gain - CUTC ENSG00000119929 CDS Human protein_coding chr10:101515450 chr10:101515451 synonymous SNV . 0 22 hm5C_associated_SNPs_112889 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:101515415-101515463
64251 chr16 81077154 81077154 1 + C A rs543006403 81077153 + 81077133 81077173 41 ATGCCCTTGTCAGTAGGAACCCTGATCCTCGGCCTAGATTC ATGCCCTTGTCAGTAGGAACCATGATCCTCGGCCTAGATTC < 41bp 0.488093885930936 0.735628695919088 0.14578646 0.15898749 prediction 0.471257391838175 Functional Gain - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81077153 chr16:81077154 nonsynonymous SNV 0.895 0 22 hm5C_associated_SNPs_112891 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr16:81077126-81077159
64251 chr3 23986884 23986884 1 + C G rs567334699 23986880 + 23986860 23986900 41 CGCCGCTCGCCGGCCGCCGCCACCCTCTCTCGCTGCAGCCT CGCCGCTCGCCGGCCGCCGCCACCGTCTCTCGCTGCAGCCT < 41bp 0.452683399178051 0.735621220647241 0.16153052 0.49660382 prediction 0.471242441294482 Functional Gain - NR1D2 ENSG00000174738 UTR5 Human protein_coding chr3:23986880 chr3:23986884 . . 0 25 hm5C_associated_SNPs_112893 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:23986864-23986894
64251 chr15 99926440 99926440 1 + T C rs2289558 99926438 + 99926418 99926458 41 CTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTC CTAGAAATGTCATGATTGAGCTCCAGAGCTAAAATGCCTTC < 41bp 0.571932548913692 0.807551613427994 0.020793766 0.08231944 prediction 0.471238129028603 Functional Gain - LRRC28 ENSG00000168904 UTR3 Human protein_coding chr15:99926438 chr15:99926440 . . 0 23 hm5C_associated_SNPs_112894 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:99926433-99926472
64251 chr16 57220340 57220340 1 + C G rs74471685 57220339 + 57220319 57220359 41 GCCGCCGCCGCCCCCTCCCTCCGGTGGGCCCGGGAGGTAGA GCCGCCGCCGCCCCCTCCCTCGGGTGGGCCCGGGAGGTAGA < 41bp 0.622731169825968 0.858340148745675 0.47044846 0.920725 prediction 0.471217957839414 Functional Gain - RSPRY1 ENSG00000159579 UTR5 Human protein_coding chr16:57220339 chr16:57220340 . . 0 22 hm5C_associated_SNPs_112896 0 0 4 DDX3X POSTAR2 ENCODE chr16:57220243-57220364
64251 chr8 11607632 11607632 1 + C T GBM 11607631 + 11607611 11607651 41 GTCTTGCAGTCCGCCTCCCGCCGAGTGGGCCTCTCCTGTGC GTCTTGCAGTCCGCCTCCCGCTGAGTGGGCCTCTCCTGTGC < 41bp 0.534039495624424 0.769642492321302 0.49211466 0.40188333 prediction 0.471205993393758 Functional Gain - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11607631 chr8:11607632 stopgain 1.000 1 22 hm5C_associated_SNPs_112897 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:11607624-11607648
64251 chr2 74425805 74425805 1 + C A rs544541606 74425804 + 74425784 74425824 41 CTAATGTCTGCTTTGGCTGCCCGGCTGCTGCAGCCCGCGCA CTAATGTCTGCTTTGGCTGCCAGGCTGCTGCAGCCCGCGCA < 41bp 0.52168962270936 0.757288442063564 0.2632274 0.7501621 prediction 0.471197638708407 Functional Gain - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74425804 chr2:74425805 synonymous SNV . 0 22 hm5C_associated_SNPs_112899 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:74425793-74425813
64251 chrX 54953521 54953521 1 + C A COAD 54953517 + 54953497 54953537 41 GGAAGTGAGGAAGCTCATCACAGACGAGTTTGTGAAGCAGA GGAAGTGAGGAAGCTCATCACAGAAGAGTTTGTGAAGCAGA < 41bp 0.33092075262548 0.735598369468892 0.38882083 0.47986242 prediction 0.471196738937783 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54953517 chrX:54953521 nonsynonymous SNV 0.996 0 25 hm5C_associated_SNPs_112900 0 0 2 PPIG POSTAR2 ENCODE chrX:54953501-54953539
64251 chr15 40702973 40702973 1 + C A LUSC 40702972 + 40702952 40702992 41 GTACGCAATGGGAATGAGGCCCAGAAAGAGAAGTATCTCCC GTACGCAATGGGAATGAGGCCAAGAAAGAGAAGTATCTCCC < 41bp 0.470728507406479 0.735598059208508 0.17424044 0.41131935 prediction 0.471196118417015 Functional Gain - IVD ENSG00000128928 CDS Human protein_coding chr15:40702972 chr15:40702973 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_112901 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr15:40702956-40702981
64251 chr8 28385294 28385294 1 + C T rs17059195 28385293 + 28385273 28385313 41 CGCCAGTGCATGGGGCATCCCCGGAACTCTAACCATCATCC CGCCAGTGCATGGGGCATCCCTGGAACTCTAACCATCATCC < 41bp 0.529652711718188 0.765250205397944 0.24798083 0.3213864 prediction 0.471194987359511 Functional Gain - FZD3 ENSG00000104290 CDS Human protein_coding chr8:28385293 chr8:28385294 synonymous SNV . 0 22 hm5C_associated_SNPs_112902 0 0 8 FXR2 POSTAR2 GSE39682,GSM977620 chr8:28385280-28385300
64251 chr19 50094186 50094186 1 + C A rs55761110 50094185 + 50094165 50094205 41 AGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGA AGCTGGAGTTGAGCTGTTCCCATAAATAAAAACCCTTCGGA < 41bp 0.502683585964545 0.738279972753894 0.10354599 0.16631132 prediction 0.471192773578697 Functional Gain - PRRG2 ENSG00000126460 UTR3 Human protein_coding chr19:50094185 chr19:50094186 . . 0 22 hm5C_associated_SNPs_112903 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:50094156-50094187
64251 chr4 1808329 1808329 1 + C T SKCM 1808328 + 1808308 1808348 41 CGCTGGGGGGCTCCCCGTACCCCGGCATCCCTGTGGAGGAG CGCTGGGGGGCTCCCCGTACCTCGGCATCCCTGTGGAGGAG < 41bp 0.556956670524008 0.792552823320429 0.19553465 0.09518027 prediction 0.471192305592842 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808328 chr4:1808329 nonsynonymous SNV 0.556 4 22 hm5C_associated_SNPs_112904 0 0 1 SUB1 POSTAR2 ENCODE chr4:1808282-1808345
64251 chr11 117062612 117062612 1 + T C COAD 117062610 + 117062590 117062630 41 CTAGACACATCGTTCATGTACATGATCGCCGGACTCTGCAT CTAGACACATCGTTCATGTACACGATCGCCGGACTCTGCAT < 41bp 0.603406906955256 0.838990189576064 0.031125665 0.0151260495 prediction 0.471166565241616 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117062610 chr11:117062612 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_112907 0 0 2 BUD13 POSTAR2 ENCODE chr11:117062565-117062665
64251 chr17 37825998 37825998 1 + C T UCEC 37825997 + 37825977 37826017 41 ACAGATTTCCTGGAGGTCAACCGCCAGGAGCTGGGGCGCTG ACAGATTTCCTGGAGGTCAACTGCCAGGAGCTGGGGCGCTG < 41bp 0.489118696582562 0.73557534012401 0.4925427 0.3143583 prediction 0.47115068024802 Functional Gain - PNMT ENSG00000141744 CDS Human protein_coding chr17:37825997 chr17:37825998 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_112911 0 0 1 YBX3 POSTAR2 ENCODE chr17:37825978-37826034
64251 chr16 46963851 46963851 1 + C A rs150052312 46963850 + 46963830 46963870 41 GAGGGCTGAAAATATCCTCCCCACAAGGGCAATCCCCGGGA GAGGGCTGAAAATATCCTCCCAACAAGGGCAATCCCCGGGA < 41bp 0.5615609424231 0.797134605689694 0.12723017 0.2092968 prediction 0.471147326533188 Functional Gain - GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46963850 chr16:46963851 . . 0 22 hm5C_associated_SNPs_112912 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:46963816-46963867
64251 chr19 12924217 12924217 1 + C T SKCM 12924216 + 12924196 12924236 41 CCTCAATGAAGGGTCCCAAGCCCGTCCCCGTTCTTCCCACC CCTCAATGAAGGGTCCCAAGCTCGTCCCCGTTCTTCCCACC < 41bp 0.520783313463353 0.756354911733175 0.097868234 0.15129384 prediction 0.471143196539644 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924216 chr19:12924217 synonymous SNV . 0 22 hm5C_associated_SNPs_112913 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr12 22211514 22211514 1 + C T UCEC 22211513 + 22211493 22211533 41 GCTTTTAGTTCGTGAAGTGACCGAACCTCTGAATTTAAATC GCTTTTAGTTCGTGAAGTGACTGAACCTCTGAATTTAAATC < 41bp 0.513539069126609 0.749105785242206 0.07037264 0.12508437 prediction 0.471133432231194 Functional Gain - CMAS ENSG00000111726 CDS Human protein_coding chr12:22211513 chr12:22211514 synonymous SNV . 0 22 hm5C_associated_SNPs_112916 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:22211500-22211520
64251 chr19 39961030 39961030 1 + C T LUSC 39961029 + 39961009 39961049 41 CCTGGCAGCTGAAGGTGCTCCCCCGGGACCTGCAGCTCTGC CCTGGCAGCTGAAGGTGCTCCTCCGGGACCTGCAGCTCTGC < 41bp 0.467469823593567 0.735555799926833 0.13836285 0.22617191 prediction 0.471111599853666 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39961029 chr19:39961030 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_112919 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr19:39961019-39961053
64251 chr11 64974002 64974002 1 + A G rs540577957 64973999 + 64973979 64974019 41 GCCAATGCGTCTCGGGCGCGCTCAGAGCAGTTCATCAACCT GCCAATGCGTCTCGGGCGCGCTCGGAGCAGTTCATCAACCT < 41bp 0.519489910549953 0.755040065626719 0.7389688 0.7057703 prediction 0.471100310153532 Functional Gain - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64973999 chr11:64974002 synonymous SNV . 0 24 hm5C_associated_SNPs_112922 0 0 2 FMR1 POSTAR2 ENCODE chr11:64973980-64974103
64251 chr5 68665752 68665752 1 + T A rs183631076 68665748 + 68665728 68665768 41 TCTTCGCCTAAAAGGGGATGCAGCTCCGGGAAAGTAAGGCC TCTTCGCCTAAAAGGGGATGCAGCACCGGGAAAGTAAGGCC < 41bp 0.573027912020651 0.808577782986689 0.48039103 0.3212492 prediction 0.471099741932077 Functional Gain - AK6;RAD17;TAF9 ENSG00000085231;ENSG00000152942 UTR5 Human other chr5:68665748 chr5:68665752 . . 0 25 hm5C_associated_SNPs_112923 0 0 5 DDX3X POSTAR2 ENCODE chr5:68665648-68665763
64251 chr4 1807859 1807859 1 + C T UCEC 1807858 + 1807838 1807878 41 ATCGCAGACTTCGGGCTGGCCCGGGACGTGCACAACCTCGA ATCGCAGACTTCGGGCTGGCCTGGGACGTGCACAACCTCGA < 41bp 0.490435967300956 0.735545982236413 0.43151927 0.8158636 prediction 0.471091964472827 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1807858 chr4:1807859 nonsynonymous SNV 0.057 5 22 hm5C_associated_SNPs_112925 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:1807825-1807863
64251 chr1 110032947 110032947 1 + C T COAD 110032946 + 110032926 110032966 41 GGATGCTATGTGTTTAGCCGCCGGCTGGACCGGTTCTGCTC GGATGCTATGTGTTTAGCCGCTGGCTGGACCGGTTCTGCTC < 41bp 0.498647042231942 0.735541709878466 0.3606871 0.164576 prediction 0.471083419756932 Functional Gain - ATXN7L2 ENSG00000162650 CDS Human protein_coding chr1:110032946 chr1:110032947 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112928 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:110032937-110032973
64251 chr1 196645149 196645149 1 + T C LUAD 196645147 + 196645127 196645167 41 TGCTAGGTGAGATTAATTACCGTGAATGTGACACAGATGGA TGCTAGGTGAGATTAATTACCGCGAATGTGACACAGATGGA < 41bp 0.600684462910034 0.836223962650615 0.16111284 0.1628598 prediction 0.471078999481161 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196645147 chr1:196645149 synonymous SNV . 0 23 hm5C_associated_SNPs_112930 0 0 3 LIN28B POSTAR2 ENCODE chr1:196645145-196645197
64251 chr3 140997196 140997196 1 + C T LUAD 140997195 + 140997175 140997215 41 TCGTTTCAGTCCACCTGATCCCGGTGTCGACTCCTAAGAAT TCGTTTCAGTCCACCTGATCCTGGTGTCGACTCCTAAGAAT < 41bp 0.51108546502227 0.746623330046662 0.4607571 0.40246603 prediction 0.471075730048784 Functional Gain - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:140997195 chr3:140997196 nonsynonymous SNV 0.891 4 22 hm5C_associated_SNPs_112931 0 0 1 DDX3X POSTAR2 ENCODE chr3:140997182-140997220
64251 chr19 5144082 5144082 1 + C T COAD 5144081 + 5144061 5144101 41 CCACGTGACCTGCGCCCACGCCGCAGGCGTGCTCATGGAGC CCACGTGACCTGCGCCCACGCTGCAGGCGTGCTCATGGAGC < 41bp 0.567247457249413 0.802775314219859 0.2877383 0.1838705 prediction 0.471055713940891 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5144081 chr19:5144082 synonymous SNV . 0 22 hm5C_associated_SNPs_112933 0 0 6 DDX24 POSTAR2 ENCODE chr19:5143991-5144125
64251 chr4 1222104 1222104 1 - T C BLCA 1222107 - 1222087 1222127 41 TGAACGAGGCTGTGGGGGCCCTGATGTACCACACCATCACT TGAACGAGGCTGTGGGGGCCCTGGTGTACCACACCATCACT < 41bp 0.49213488032133 0.735502842551399 0.4456988 0.7915499 prediction 0.471005685102798 Functional Gain - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1222107 chr4:1222104 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_112934 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:1222078-1222109
64251 chr17 58677721 58677721 1 + C A rs546893636 58677720 + 58677700 58677740 41 GGCGAGCGCCTAGTGTGTCTCCCGCCGCCGGATTCGGCGGG GGCGAGCGCCTAGTGTGTCTCACGCCGCCGGATTCGGCGGG < 41bp 0.504469663831429 0.73995589154125 0.29914165 0.2870611 prediction 0.470972455419642 Functional Gain - PPM1D ENSG00000170836 UTR5 Human protein_coding chr17:58677720 chr17:58677721 . . 0 22 hm5C_associated_SNPs_112939 0 0 3 DDX3X POSTAR2 ENCODE chr17:58677700-58677835
64251 chr12 56384490 56384490 1 + T C STAD 56384488 + 56384468 56384508 41 AACCTTTGCCCGAGCAAAGACATGGGTGAAGGAACTACAGC AACCTTTGCCCGAGCAAAGACACGGGTGAAGGAACTACAGC < 41bp 0.454991301777421 0.735468216698952 0.37901384 0.36754632 prediction 0.470936433397904 Functional Gain - RAB5B ENSG00000111540 CDS Human protein_coding chr12:56384488 chr12:56384490 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_112941 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:56384480-56384500
64251 chr12 44176189 44176189 1 + C A THCA 44176188 + 44176168 44176208 41 CGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAG CGGGCTTCTGAGAAGTTTGCCAAGACAGTCATGACTAGCAG < 41bp 0.542792985107281 0.778240678782505 0.13233572 0.41219464 prediction 0.470895387350448 Functional Gain - IRAK4 ENSG00000198001 CDS Human protein_coding chr12:44176188 chr12:44176189 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_112949 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:44176148-44176191
64251 chr3 127981028 127981028 1 + C T GBM 127981027 + 127981007 127981047 41 GCCGGGGGGACCAGAGGCCCCCGAAACTGAAGCTCCACAGG GCCGGGGGGACCAGAGGCCCCTGAAACTGAAGCTCCACAGG < 41bp 0.501865506770713 0.737312821256952 0.46983406 0.58648753 prediction 0.470894628972478 Functional Gain - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981027 chr3:127981028 synonymous SNV . 0 22 hm5C_associated_SNPs_112950 0 0 2 BUD13 POSTAR2 ENCODE chr3:127981000-127981039
64251 chr18 21033329 21033329 1 + C A OV 21033325 + 21033305 21033345 41 CAGCAGCCAGTCGCCCGTGTCCCGCCTGTCTCCTCGGCGGA CAGCAGCCAGTCGCCCGTGTCCCGACTGTCTCCTCGGCGGA < 41bp 0.476609463264184 0.735446815130845 0.08034518 0.2165375 prediction 0.470893630261689 Functional Gain - RIOK3 ENSG00000101782 UTR5 Human protein_coding chr18:21033325 chr18:21033329 . . 0 25 hm5C_associated_SNPs_112951 0 0 2 GEMIN5 POSTAR2 ENCODE chr18:21033284-21033447
64251 chr7 36194058 36194058 1 + T G UCS 36194056 + 36194036 36194076 41 GTGAATCAGGAGCGGCTCAACATCAACACTGCCACGGAGGA GTGAATCAGGAGCGGCTCAACAGCAACACTGCCACGGAGGA < 41bp 0.374784310673551 0.735438795124537 0.09843123 0.23267767 prediction 0.470877590249074 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194056 chr7:36194058 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_112955 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:36194058-36194059
64251 chr6 116757798 116757798 1 + C T SKCM 116757797 + 116757777 116757817 41 CGTCACAAAATTCTGTTTGACCGGAATTCAGCCATCAAGAG CGTCACAAAATTCTGTTTGACTGGAATTCAGCCATCAAGAG < 41bp 0.50379557906335 0.739227129091827 0.31862164 0.19519219 prediction 0.470863100056954 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116757797 chr6:116757798 nonsynonymous SNV 0.591 1 22 hm5C_associated_SNPs_112958 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:116757781-116757817
64251 chr16 28844619 28844619 1 + C G UCEC 28844615 + 28844595 28844635 41 ACCACCTTGTCCAAGCCAAACTGGCAGCCCCCCGGTGGGCC ACCACCTTGTCCAAGCCAAACTGGGAGCCCCCCGGTGGGCC < 41bp 0.617867452051567 0.853298932835643 0.17636514 0.82577026 prediction 0.470862961568151 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28844615 chr16:28844619 synonymous SNV . 0 25 hm5C_associated_SNPs_112959 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:28844600-28844620
64251 chr12 64878240 64878240 1 + C T COAD 64878239 + 64878219 64878259 41 AACCCTATATTTGTAGTAAGCCGGGAACCTCTGAATACCAT AACCCTATATTTGTAGTAAGCTGGGAACCTCTGAATACCAT < 41bp 0.505681532939856 0.741111844913126 0.37527022 0.18712753 prediction 0.470860623946541 Functional Gain - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64878239 chr12:64878240 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_112960 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr12:64878206-64878252
64251 chr2 190315251 190315251 1 + C G rs141577694 190315250 + 190315230 190315270 41 TAGGGGTTTCGTCATGTTGGCCAGGCTGGTCTCGAACTCCT TAGGGGTTTCGTCATGTTGGCGAGGCTGGTCTCGAACTCCT < 41bp 0.530238884307001 0.765661657066974 0.24047357 0.6896634 prediction 0.470845545519947 Functional Gain - WDR75 ENSG00000115368 UTR3 Human protein_coding chr2:190315250 chr2:190315251 . . 0 22 hm5C_associated_SNPs_112962 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:190315211-190315255
64251 chr7 21940843 21940843 1 - G T SARC 21940847 - 21940827 21940867 41 CTTCTAGAAGCAGAGCCACTCCAGCCAGAACCCATTTTGCA CTTCTAGAAGCAGAGCCACTCCAGACAGAACCCATTTTGCA < 41bp 0.365442509651383 0.735416810246975 0.16592121 0.13070393 prediction 0.47083362049395 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21940847 chr7:21940843 nonsynonymous SNV 0.658 4 25 hm5C_associated_SNPs_112963 0 0 5 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr7:21940822-21940843
64251 chr17 27017169 27017169 1 + C T GBM 27017168 + 27017148 27017188 41 AGCTGTCGATATAAGGACCTCCGGACAGCCTACCGCTCTCC AGCTGTCGATATAAGGACCTCTGGACAGCCTACCGCTCTCC < 41bp 0.476363960639224 0.735412011652303 0.63846654 0.37096062 prediction 0.470824023304607 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27017168 chr17:27017169 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112965 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr17:27017101-27017189
64251 chr6 13574807 13574807 1 + C A rs561015899 13574803 + 13574783 13574823 41 ACAGAGAGCTGGGAGGGAGGCACCCCGGGGGGCGGGGCGTG ACAGAGAGCTGGGAGGGAGGCACCACGGGGGGCGGGGCGTG < 41bp 0.681575761378318 0.916985126015812 0.6910994 0.86293983 prediction 0.470818729274987 Functional Gain - SIRT5 ENSG00000124523 upstream Human protein_coding chr6:13574803 chr6:13574807 . . 0 25 hm5C_associated_SNPs_112967 0 0 6 CSTF2T POSTAR2 ENCODE chr6:13574785-13574872
64251 chr20 43034856 43034856 1 + C A LUAD 43034855 + 43034835 43034875 41 CGGAGGAGCGTGCGGAAGAACCACATGTACTCCTGCAGGTG CGGAGGAGCGTGCGGAAGAACAACATGTACTCCTGCAGGTG < 41bp 0.476949747902848 0.73539523159069 0.42498806 0.3346498 prediction 0.47079046318138 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43034855 chr20:43034856 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112969 0 0 4 GRWD1 POSTAR2 ENCODE chr20:43034805-43034859
64251 chr9 71395013 71395013 1 + C G rs3750377 71395009 + 71394989 71395029 41 GGTGGCGGCGGCAGCGGCGGCGGCCCTGGACTGCGGGGAAT GGTGGCGGCGGCAGCGGCGGCGGCGCTGGACTGCGGGGAAT < 41bp 0.564771211381713 0.800156240717138 0.8290559 0.82915914 prediction 0.470770058670851 Functional Gain - FAM122A ENSG00000187866 UTR5 Human protein_coding chr9:71395009 chr9:71395013 . . 0 25 hm5C_associated_SNPs_112971 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr9:71395013-71395014
64251 chr5 82789520 82789520 1 + C A LUSC 82789516 + 82789496 82789536 41 TTTGAGCAGTGTGACGCAGGCTGGCTGGCTGATCAGACTGT TTTGAGCAGTGTGACGCAGGCTGGATGGCTGATCAGACTGT < 41bp 0.341768503718838 0.735374686161807 0.06830114 0.3963818 prediction 0.470749372323614 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82789516 chr5:82789520 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_112976 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:82789502-82789522
64251 chr9 129154437 129154437 1 + C T STAD 129154436 + 129154416 129154456 41 TGTGACATTCGGATCATGGGCCGGACCAAGCAGGCCCCGCC TGTGACATTCGGATCATGGGCTGGACCAAGCAGGCCCCGCC < 41bp 0.480801907877434 0.735373004283264 0.87117934 0.7183741 prediction 0.470746008566527 Functional Gain - MVB12B ENSG00000196814 CDS Human protein_coding chr9:129154436 chr9:129154437 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_112977 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:129154415-129154445
64251 chr19 36430892 36430892 1 + C A UCEC 36430891 + 36430871 36430911 41 GTCAACACGTTGGGCCTCGACCACAACCTGCTGGCTTCTGT GTCAACACGTTGGGCCTCGACAACAACCTGCTGGCTTCTGT < 41bp 0.550008203131989 0.785372231559401 0.2437216 0.14246449 prediction 0.470728056854825 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430891 chr19:36430892 nonsynonymous SNV 0.972 3 22 hm5C_associated_SNPs_112979 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36430879-36430917
64251 chr2 242758321 242758321 1 + C T SKCM 242758320 + 242758300 242758340 41 CTGGAGAACGTGCCCGCCAGCCCCAAGCCGCCCAACCTTGG CTGGAGAACGTGCCCGCCAGCTCCAAGCCGCCCAACCTTGG < 41bp 0.538906391754894 0.774267726440112 0.14002928 0.8946024 prediction 0.470722669370436 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758320 chr2:242758321 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_112982 0 0 1 DDX55 POSTAR2 ENCODE chr2:242758281-242758381
64251 chr19 41725377 41725377 1 + C A UCEC 41725376 + 41725356 41725396 41 GCGGCTGGGCGTGCATGGCCCCCAGGGGTGAGTGATGGGGG GCGGCTGGGCGTGCATGGCCCACAGGGGTGAGTGATGGGGG < 41bp 0.537693214111429 0.773054376874892 0.011133432 0.049827248 prediction 0.470722325526926 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41725376 chr19:41725377 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_112983 0 0 2 DDX3X POSTAR2 ENCODE chr19:41725297-41725383
64251 chr6 33173243 33173243 1 + A G UCEC 33173240 + 33173220 33173260 41 CCAGGGCACCTTCCTAGTCACTCAGGCTGCAGCACAAGCCC CCAGGGCACCTTCCTAGTCACTCGGGCTGCAGCACAAGCCC < 41bp 0.531676054264557 0.767036520267318 0.01981908 0.05867678 prediction 0.470720932005523 Functional Gain - HSD17B8 ENSG00000204228 CDS Human protein_coding chr6:33173240 chr6:33173243 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_112984 0 0 3 U2AF2 POSTAR2 ENCODE chr6:33173205-33173261
64251 chr4 1730314 1730314 1 + C A rs146630510 1730310 + 1730290 1730330 41 GAGCGGAGCAGGAGAGGACCCCCCCATGCCAGCTTCTCGGG GAGCGGAGCAGGAGAGGACCCCCCAATGCCAGCTTCTCGGG < 41bp 0.307208128152989 0.735356878214594 0.28678066 0.3810183 prediction 0.470713756429187 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730310 chr4:1730314 synonymous SNV . 0 25 hm5C_associated_SNPs_112987 0 0 19 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:1730300-1730320
64251 chr16 81641248 81641248 1 + C T STAD 81641247 + 81641227 81641267 41 TGCTGTCCTGGGAGAATGCCCCGAAGTACTGTTTACAGCTC TGCTGTCCTGGGAGAATGCCCTGAAGTACTGTTTACAGCTC < 41bp 0.477470371104554 0.735354725427999 0.2652822 0.12087867 prediction 0.470709450855998 Functional Gain - CMIP ENSG00000153815 CDS Human protein_coding chr16:81641247 chr16:81641248 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_112989 0 0 4 BUD13 POSTAR2 ENCODE chr16:81641225-81641279
64251 chr19 13064354 13064354 1 + C A rs376322659 13064353 + 13064333 13064373 41 AGTCTGGCCTTGGCCTCCAGCCTGGAGAAGGGCTAACATCA AGTCTGGCCTTGGCCTCCAGCATGGAGAAGGGCTAACATCA < 41bp 0.507218203269894 0.742565372137665 0.41563702 0.87633395 prediction 0.470694337735543 Functional Gain - RAD23A ENSG00000179262 UTR3 Human protein_coding chr19:13064353 chr19:13064354 . . 0 22 hm5C_associated_SNPs_112993 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:13064198-13064381
64251 chr12 32134868 32134868 1 + C T SKCM 32134867 + 32134847 32134887 41 TTTCAACAGCAGTGGCAAAACCCTAATGAAAATGTCAGCAC TTTCAACAGCAGTGGCAAAACTCTAATGAAAATGTCAGCAC < 41bp 0.49643810292547 0.735345661085702 0.18328059 0.91157365 prediction 0.470691322171405 Functional Gain - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32134867 chr12:32134868 nonsynonymous SNV 0.699 0 22 hm5C_associated_SNPs_112994 0 0 3 LARP4 POSTAR2 ENCODE chr12:32134818-32134886
64251 chr8 86127171 86127171 1 - A C BLCA 86127173 - 86127153 86127193 41 ATTTCGCAAAAAGCATTTCACTTGAACCTCTGCAGAAAGAA ATTTCGCAAAAAGCATTTCACTGGAACCTCTGCAGAAAGAA < 41bp 0.623833961345589 0.85916640720861 0.08494067 0.16790292 prediction 0.470664891726042 Functional Gain - C8orf59 ENSG00000176731 CDS Human protein_coding chr8:86127173 chr8:86127171 synonymous SNV . 0 23 hm5C_associated_SNPs_113001 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:86127158-86127179
64251 chr10 71393025 71393025 1 + A G rs1132075 71393022 + 71393002 71393042 41 TGTGGGTGGGTCCGTTGGTTCCCAAGATACTTTTAGGTGGT TGTGGGTGGGTCCGTTGGTTCCCGAGATACTTTTAGGTGGT < 41bp 0.51313825926597 0.748466847730797 0.13726118 0.58113474 prediction 0.470657176929654 Functional Gain - C10orf35 ENSG00000171224 UTR3 Human protein_coding chr10:71393022 chr10:71393025 . . 0 24 hm5C_associated_SNPs_113004 0 1 4 UPF1 POSTAR2 GSE69586,GSM1704214 chr10:71393014-71393035
64251 chr16 90001496 90001496 1 + C A UCEC 90001495 + 90001475 90001515 41 GCGCTCTACGACATCTGCTTCCGCACCCTCAAGCTGGCCAC GCGCTCTACGACATCTGCTTCAGCACCCTCAAGCTGGCCAC < 41bp 0.547852217495338 0.78317727205962 0.17669663 0.20406595 prediction 0.470650109128564 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001495 chr16:90001496 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113005 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:90001461-90001502
64251 chr17 2583573 2583573 1 + T C STAD 2583571 + 2583551 2583591 41 GATTACAAGAACAAGCGATGCATGAAGACCCTCAATGCGCA GATTACAAGAACAAGCGATGCACGAAGACCCTCAATGCGCA < 41bp 0.448775879810958 0.73532155949854 0.0610604 0.08762717 prediction 0.47064311899708 Functional Gain - PAFAH1B1 ENSG00000007168 CDS Human protein_coding chr17:2583571 chr17:2583573 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_113006 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:2583470-2583602
64251 chr3 38022247 38022247 1 + C A UCEC 38022246 + 38022226 38022266 41 CTTCCAGGTGCCTGTGCAGTCCTGGTTCGATGACATGACGG CTTCCAGGTGCCTGTGCAGTCATGGTTCGATGACATGACGG < 41bp 0.547182236529003 0.782501991207289 0.2856112 0.3009243 prediction 0.470639509356572 Functional Gain - CTDSPL ENSG00000144677 CDS Human protein_coding chr3:38022246 chr3:38022247 synonymous SNV . 0 22 hm5C_associated_SNPs_113007 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:38022242-38022259
64251 chr17 37872089 37872089 1 + T G BRCA 37872087 + 37872067 37872107 41 GTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTTC GTGGACTGGCCCTCATCCACCAGAACACCCACCTCTGCTTC < 41bp 0.378556029311759 0.735308854994564 0.12029934 0.27487794 prediction 0.470617709989128 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872087 chr17:37872089 nonsynonymous SNV 0.549 0 23 hm5C_associated_SNPs_113011 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:37872088-37872108
64251 chr22 50644857 50644857 1 + C T MESO 50644856 + 50644836 50644876 41 GGCCGGCGCCTGCGTCACGTCCGAGTCCACGGTGGTGCGCG GGCCGGCGCCTGCGTCACGTCTGAGTCCACGGTGGTGCGCG < 41bp 0.530219260060313 0.765527797290042 0.1829417 0.059275597 prediction 0.47061707445946 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50644856 chr22:50644857 unknown . 0 22 hm5C_associated_SNPs_113012 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr22:50644840-50644860
64251 chr11 66260376 66260376 1 + C T SKCM 66260375 + 66260355 66260395 41 TCCCTGCCGGCATCAACATCCCCAACTGTGAGTGTCTCAGG TCCCTGCCGGCATCAACATCCTCAACTGTGAGTGTCTCAGG < 41bp 0.460718688758332 0.735289900490033 0.22530857 0.14202139 prediction 0.470579800980066 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66260375 chr11:66260376 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113015 0 0 1 PPIG POSTAR2 ENCODE chr11:66260334-66260382
64251 chr5 162939023 162939023 1 + C T SKCM 162939022 + 162939002 162939042 41 TTTTAGGAGGAAGTTAACATCCCTAATAGGAGGGTTCTGGT TTTTAGGAGGAAGTTAACATCTCTAATAGGAGGGTTCTGGT < 41bp 0.566971967161772 0.802257976864853 0.15804291 0.93940806 prediction 0.470572019406164 Functional Gain - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162939022 chr5:162939023 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_113018 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr5:162939020-162939042
64251 chr12 6499962 6499962 1 + C T SKCM 6499961 + 6499941 6499981 41 CGAACCTCCATACCCCATTCCCGAAGAGGGGGACCCTGGCC CGAACCTCCATACCCCATTCCTGAAGAGGGGGACCCTGGCC < 41bp 0.488640399449728 0.735277923315554 0.8959786 0.5468863 prediction 0.470555846631109 Functional Gain - LTBR ENSG00000111321 CDS Human protein_coding chr12:6499961 chr12:6499962 synonymous SNV . 0 22 hm5C_associated_SNPs_113024 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:6499916-6499965
64251 chr11 63964802 63964802 1 + C A UCEC 63964798 + 63964778 63964818 41 CAAGAAGAAAGACTTTGACACAGCCTTGAAGCATTACGACA CAAGAAGAAAGACTTTGACACAGCATTGAAGCATTACGACA < 41bp 0.31618583992596 0.735273587487212 0.123654366 0.21166292 prediction 0.470547174974423 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63964798 chr11:63964802 synonymous SNV . 0 25 hm5C_associated_SNPs_113025 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:63964752-63964860
64251 chr1 179317997 179317997 1 + T C UCEC 179317995 + 179317975 179318015 41 TCAGGATTGGTGGAACTCCACGTCATACTCCAACTATTATA TCAGGATTGGTGGAACTCCACGCCATACTCCAACTATTATA < 41bp 0.435873670526259 0.735269075904767 0.011697054 0.07509002 prediction 0.470538151809534 Functional Gain - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179317995 chr1:179317997 nonsynonymous SNV 0.981 4 23 hm5C_associated_SNPs_113029 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:179317987-179318016
64251 chr1 155110754 155110754 1 + C A LGG 155110753 + 155110733 155110773 41 GAACTACTGGCTCCTGCAAACCTGAGGCTGCTCATCTGACC GAACTACTGGCTCCTGCAAACATGAGGCTGCTCATCTGACC < 41bp 0.554382408735967 0.789646630862611 0.4819858 0.5733403 prediction 0.470528444253288 Functional Gain - SLC50A1 ENSG00000169241 CDS Human protein_coding chr1:155110753 chr1:155110754 synonymous SNV . 0 22 hm5C_associated_SNPs_113032 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:155110726-155110759
64251 chr9 80923441 80923441 1 + C T UCEC 80923440 + 80923420 80923460 41 CTCCGAGAGTGCCCCTCGGTCCTGGAATACAAGGTGCAGGC CTCCGAGAGTGCCCCTCGGTCTTGGAATACAAGGTGCAGGC < 41bp 0.554519549995995 0.789783117314001 0.08641276 0.057329923 prediction 0.470527134636011 Functional Gain - PSAT1 ENSG00000135069 CDS Human protein_coding chr9:80923440 chr9:80923441 synonymous SNV . 0 22 hm5C_associated_SNPs_113033 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr9:80923327-80923454
64251 chr5 81600655 81600655 1 + T G rs539869294 81600652 + 81600632 81600672 41 GACCCTGACAACTCAAATTGCAGTGAAGAAAGTGCTAGGTA GACCCTGACAACTCAAATTGCAGGGAAGAAAGTGCTAGGTA < 41bp 0.466775939129589 0.735263306139918 0.17162922 0.8365644 prediction 0.470526612279837 Functional Gain - ATP6AP1L ENSG00000205464 UTR5 Human protein_coding chr5:81600652 chr5:81600655 . . 0 24 hm5C_associated_SNPs_113034 0 0 1 PRPF8 POSTAR2 ENCODE chr5:81600653-81600707
64251 chr1 24077656 24077656 1 + T C rs143173872 24077654 + 24077634 24077674 41 CTCCATCTTGTACCAGTCCTCATCAGATGTACGTCGACCAC CTCCATCTTGTACCAGTCCTCACCAGATGTACGTCGACCAC < 41bp 0.611937879605631 0.847180852614949 0.16519707 0.25437176 prediction 0.470485946018636 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24077654 chr1:24077656 synonymous SNV . 0 23 hm5C_associated_SNPs_113041 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:24077616-24077656
64251 chr6 28053579 28053579 1 + C A PAAD 28053578 + 28053558 28053598 41 CCTGCCAGGAGATTTGCAGGCCTGGGTACATGAACATTACC CCTGCCAGGAGATTTGCAGGCATGGGTACATGAACATTACC < 41bp 0.466887338435435 0.735228269515338 0.31564203 0.4364891 prediction 0.470456539030676 Functional Gain - ZNF165 ENSG00000197279 CDS Human protein_coding chr6:28053578 chr6:28053579 synonymous SNV . 0 22 hm5C_associated_SNPs_113046 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:28053541-28053584
64251 chr16 89629420 89629420 1 + C T STAD 89629419 + 89629399 89629439 41 GGCAAAAAGAGCCAAGGAAGCCGCAGAACAGGATGTTGAAA GGCAAAAAGAGCCAAGGAAGCTGCAGAACAGGATGTTGAAA < 41bp 0.526776678345103 0.76199745645869 0.46787176 0.330293 prediction 0.470441556227174 Functional Gain - RPL13 ENSG00000167526 CDS Human protein_coding chr16:89629419 chr16:89629420 synonymous SNV . 0 22 hm5C_associated_SNPs_113050 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr16:89629420-89629440
64251 chrX 133547639 133547639 1 + C T COAD 133547638 + 133547618 133547658 41 TAAAGGGCTGTCAGAAGATACCAGGTCCACATCCTCCCATG TAAAGGGCTGTCAGAAGATACTAGGTCCACATCCTCCCATG < 41bp 0.506018292060121 0.741236599262449 0.880314 0.88250697 prediction 0.470436614404656 Functional Gain - PHF6 ENSG00000156531 CDS Human protein_coding chrX:133547638 chrX:133547639 synonymous SNV . 0 22 hm5C_associated_SNPs_113053 0 0 12 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:133547605-133547641
64251 chr11 120096395 120096395 1 + T A LAML 120096391 + 120096371 120096411 41 ATGTGAAGGTCTTCCGGGCCCTGATCCTGGGGGAGCTGGAG ATGTGAAGGTCTTCCGGGCCCTGAACCTGGGGGAGCTGGAG < 41bp 0.411385199554979 0.735213993854695 0.238428 0.44183046 prediction 0.47042798770939 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120096391 chr11:120096395 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_113055 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:120096394-120096395
64251 chr19 4409751 4409751 1 + C T ACC 4409750 + 4409730 4409770 41 TTCCCCACCTCCACGCCCCTCCGCAGAGTGAGTATCTCCCA TTCCCCACCTCCACGCCCCTCTGCAGAGTGAGTATCTCCCA < 41bp 0.534138779277494 0.769347796332674 0.07955024 0.07131514 prediction 0.470418034110359 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409750 chr19:4409751 nonsynonymous SNV 0.097 0 22 hm5C_associated_SNPs_113059 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:4409719-4409752
64251 chrX 49093692 49093692 1 + C T LGG 49093691 + 49093671 49093711 41 CTGCCTCTTGCCATGTCTGCCCGGTTCCGCCTGGCCATGAG CTGCCTCTTGCCATGTCTGCCTGGTTCCGCCTGGCCATGAG < 41bp 0.503848039894641 0.739053333210278 0.28338522 0.35788953 prediction 0.470410586631273 Functional Gain - CCDC22 ENSG00000101997 CDS Human protein_coding chrX:49093691 chrX:49093692 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113061 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:49093682-49093727
64251 chr7 138946438 138946438 1 + C A UCEC 138946434 + 138946414 138946454 41 TGCCCAAAGTGGTACCTACACTCCCAGAGGGTCTACCTGTA TGCCCAAAGTGGTACCTACACTCCAAGAGGGTCTACCTGTA < 41bp 0.302299227893705 0.735195765521232 0.066471756 0.9571989 prediction 0.470391531042464 Functional Gain - UBN2 ENSG00000157741 CDS Human protein_coding chr7:138946434 chr7:138946438 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_113065 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr7:138946417-138946445
64251 chr17 38323757 38323757 1 + C T STAD 38323756 + 38323736 38323776 41 CTTTCTTTGTCTCAGGGTGTCCAGGGTGGTCGAGCCAAACG CTTTCTTTGTCTCAGGGTGTCTAGGGTGGTCGAGCCAAACG < 41bp 0.530050985177894 0.765226642879163 0.70699334 0.38520724 prediction 0.470351315402538 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38323756 chr17:38323757 stopgain 0.982 0 22 hm5C_associated_SNPs_113069 0 0 15 CPSF3 POSTAR2 GSE37401,GSM917669 chr17:38323726-38323759
64251 chrX 47038822 47038822 1 + C T BLCA 47038821 + 47038801 47038841 41 CTTCCCCTGCCGCAGCCCTACCAGGCCCAGGGAGTCCTGGC CTTCCCCTGCCGCAGCCCTACTAGGCCCAGGGAGTCCTGGC < 41bp 0.526932401481883 0.762107479544972 0.2603628 0.24860558 prediction 0.470350156126178 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47038821 chrX:47038822 stopgain 1.000 1 22 hm5C_associated_SNPs_113070 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chrX:47038821-47038822
64251 chr19 13058999 13058999 1 + C A BLCA 13058998 + 13058978 13059018 41 CTTGCTGTTGCAGACCAAAGCCGGCCAGGGTACCTCAGCAC CTTGCTGTTGCAGACCAAAGCAGGCCAGGGTACCTCAGCAC < 41bp 0.563149846036595 0.798322254730271 0.8475419 0.9184632 prediction 0.470344817387351 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13058998 chr19:13058999 synonymous SNV . 0 22 hm5C_associated_SNPs_113072 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13058980-13059000
64251 chr17 19445740 19445740 1 + T C UCEC 19445738 + 19445718 19445758 41 CTGATGGTGTTCCTGATCAGCTTCATAAGCTCCGTGTTCTG CTGATGGTGTTCCTGATCAGCTCCATAAGCTCCGTGTTCTG < 41bp 0.455060282835813 0.735159319300891 0.16304597 0.9273521 prediction 0.470318638601782 Functional Gain - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19445738 chr17:19445740 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_113076 0 0 2 DDX3X POSTAR2 ENCODE chr17:19445728-19445801
64251 chr12 58114630 58114630 1 + C T STAD 58114629 + 58114609 58114649 41 AAAGAGCTGGAGAGCAATTACCGCCGGGTGTGGGGCTCTCC AAAGAGCTGGAGAGCAATTACTGCCGGGTGTGGGGCTCTCC < 41bp 0.492575099036761 0.735141841175004 0.8677652 0.84624445 prediction 0.470283682350008 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58114629 chr12:58114630 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_113079 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:58114608-58114630
64251 chr2 162273127 162273127 1 + C T BLCA 162273126 + 162273106 162273146 41 AGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCA AGTCAGATACAGACAATTTTCTTGACTCCAAGGACTCACCA < 41bp 0.497326318947124 0.735128047518196 0.017037302 0.011740327 prediction 0.470256095036392 Functional Gain - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162273126 chr2:162273127 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_113082 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:162273111-162273152
64251 chr13 28840917 28840917 1 + C A LIHC 28840916 + 28840896 28840936 41 GAACCACTGCCACCTCCCAACCGGATACAGAAATCAAGTAA GAACCACTGCCACCTCCCAACAGGATACAGAAATCAAGTAA < 41bp 0.559497290721243 0.794624641513843 0.18352339 0.1500949 prediction 0.4702547015852 Functional Gain - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28840916 chr13:28840917 synonymous SNV . 0 22 hm5C_associated_SNPs_113084 0 0 3 BUD13 POSTAR2 ENCODE chr13:28840891-28840923
64251 chr20 18523754 18523754 1 + C T SKCM 18523753 + 18523733 18523773 41 ATGGCACGGCTTGGGGTGTTCCGAGCGGAGTCAGAGGAGGG ATGGCACGGCTTGGGGTGTTCTGAGCGGAGTCAGAGGAGGG < 41bp 0.541401081622519 0.776520231465839 0.7587556 0.7781075 prediction 0.470238299686639 Functional Gain - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18523753 chr20:18523754 stopgain 0.917 1 22 hm5C_associated_SNPs_113086 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:18523741-18523764
64251 chr6 31939957 31939957 1 - G C HNSC 31939961 - 31939941 31939981 41 CGCCAGGCCGGGCCCCACGCCGGCCGCGGATTGGCTCCCTC CGCCAGGCCGGGCCCCACGCCGGCGGCGGATTGGCTCCCTC < 41bp 0.476264936876505 0.735114950239383 0.5251409 0.8899449 prediction 0.470229900478765 Functional Gain - STK19 ENSG00000204344 CDS Human protein_coding chr6:31939961 chr6:31939957 nonsynonymous SNV 0.000 1 25 hm5C_associated_SNPs_113087 0 0 1 NCBP2 POSTAR2 ENCODE chr6:31939833-31940026
64251 chr1 156845314 156845314 1 + C A LUSC 156845313 + 156845293 156845333 41 GGCTGTGTCTCCTCTCTAGGCCCGGCTGTGCTGGCTCCAGA GGCTGTGTCTCCTCTCTAGGCACGGCTGTGCTGGCTCCAGA < 41bp 0.55662071394089 0.791719964822081 0.8865416 0.9337543 prediction 0.470198501762383 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156845313 chr1:156845314 nonsynonymous SNV 0.419 1 22 hm5C_associated_SNPs_113094 0 0 1 ZNF622 POSTAR2 ENCODE chr1:156845310-156845342
64251 chr20 34828409 34828409 1 + C T UCEC 34828408 + 34828388 34828428 41 CCCAGAGCCGGGACAGAGATCCGCTTCTCAGAGCTGCCCAC CCCAGAGCCGGGACAGAGATCTGCTTCTCAGAGCTGCCCAC < 41bp 0.488452902579207 0.735098240457143 0.24057633 0.15591565 prediction 0.470196480914287 Functional Gain - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828408 chr20:34828409 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113096 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:34828392-34828418
64251 chr7 141351345 141351345 1 + C T UCEC 141351344 + 141351324 141351364 41 GAAGTCGAAAGGTGAGAAACCCCAAGCTGCACGTGGAGGGC GAAGTCGAAAGGTGAGAAACCTCAAGCTGCACGTGGAGGGC < 41bp 0.566991784250025 0.802059804418539 0.31860137 0.21043107 prediction 0.470136040337027 Functional Gain - AGK ENSG00000006530 CDS Human protein_coding chr7:141351344 chr7:141351345 nonsynonymous SNV 0.547 1 22 hm5C_associated_SNPs_113106 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:141351345-141351346
64251 chr1 51439761 51439761 1 + T C UCEC 51439759 + 51439739 51439779 41 GAAGGGAACCTGCCCTTGCACTTGGCTGCCAAAGAAGGCCA GAAGGGAACCTGCCCTTGCACTCGGCTGCCAAAGAAGGCCA < 41bp 0.589549242140268 0.824611688723834 0.23476666 0.17443877 prediction 0.470124893167132 Functional Gain - CDKN2C ENSG00000123080 CDS Human protein_coding chr1:51439759 chr1:51439761 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_113107 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:51439724-51439766
64251 chr7 75517459 75517459 1 + C T LUSC 75517458 + 75517438 75517478 41 GGCACATGCCCACCTTGCCTCCGTACCAGCCTGCCTCCGGC GGCACATGCCCACCTTGCCTCTGTACCAGCCTGCCTCCGGC < 41bp 0.517332792246012 0.752394716935844 0.4010108 0.3271457 prediction 0.470123849379664 Functional Gain - RHBDD2 ENSG00000005486 CDS Human protein_coding chr7:75517458 chr7:75517459 nonsynonymous SNV 0.941 0 22 hm5C_associated_SNPs_113108 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:75517442-75517480
64251 chr10 23248457 23248457 1 + C A rs150310367 23248456 + 23248436 23248476 41 GACTACTGAGTAGCCCTGACCCGGATGTAAAGAAGAACTCT GACTACTGAGTAGCCCTGACCAGGATGTAAAGAAGAACTCT < 41bp 0.547102500778753 0.78216273214033 0.4009118 0.7506858 prediction 0.470120462723154 Functional Gain - ARMC3 ENSG00000165309 CDS Human protein_coding chr10:23248456 chr10:23248457 nonsynonymous SNV 0.385 4 22 hm5C_associated_SNPs_113110 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:23248436-23248459
64251 chr14 77935583 77935583 1 + C G LUAD 77935579 + 77935559 77935599 41 ACAGACCTTTGGCTATGGCGCACGCTTATTTTAGGGCCAGC ACAGACCTTTGGCTATGGCGCACGGTTATTTTAGGGCCAGC < 41bp 0.592496778049665 0.827532544735006 0.056376338 0.19712189 prediction 0.470071533370681 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77935579 chr14:77935583 synonymous SNV . 0 25 hm5C_associated_SNPs_113117 0 0 41 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:77935524-77935583
64251 chr1 246929405 246929405 1 + T C COAD 246929403 + 246929383 246929423 41 ATAGCTATGGTTCAGGCAGCCATGACTCTTCTAAGTGATGC ATAGCTATGGTTCAGGCAGCCACGACTCTTCTAAGTGATGC < 41bp 0.592551178088756 0.827586840629157 0.070902914 0.056219727 prediction 0.470071325080802 Functional Gain - SCCPDH ENSG00000143653 CDS Human protein_coding chr1:246929403 chr1:246929405 nonsynonymous SNV 0.948 0 23 hm5C_associated_SNPs_113118 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:246929386-246929414
64251 chr7 155556607 155556607 1 + C T SKCM 155556606 + 155556586 155556626 41 TGCCCGCAAGGTGACGCTGACCAGGGGGGGCCTCCAGCAGC TGCCCGCAAGGTGACGCTGACTAGGGGGGGCCTCCAGCAGC < 41bp 0.544474604381582 0.779496055717945 0.8642807 0.3777472 prediction 0.470042902672726 Functional Gain - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155556606 chr7:155556607 synonymous SNV . 0 22 hm5C_associated_SNPs_113122 0 0 1 PPIG POSTAR2 ENCODE chr7:155556505-155556615
64251 chr19 7591755 7591755 1 + C T BLCA 7591754 + 7591734 7591774 41 CTCTGCCAGCGGTACTACCACCGAGGCCACGTGGACCCGGC CTCTGCCAGCGGTACTACCACTGAGGCCACGTGGACCCGGC < 41bp 0.537594828749002 0.772615947247118 0.38723063 0.20034385 prediction 0.470042236996231 Functional Gain - MCOLN1 ENSG00000090674 CDS Human protein_coding chr19:7591754 chr19:7591755 stopgain 0.430 0 22 hm5C_associated_SNPs_113123 1 0 1 SND1 POSTAR2 ENCODE chr19:7591666-7591791
64251 chr17 38497847 38497847 1 + C A rs542057035 38497843 + 38497823 38497863 41 GAGCCCCGCGGGCGGGCTGGCGAGCGGGTGATGTCACGGGC GAGCCCCGCGGGCGGGCTGGCGAGAGGGTGATGTCACGGGC < 41bp 0.663880484519189 0.898889867172915 0.86615765 0.905365 prediction 0.470018765307453 Functional Gain - RARA-AS1 ENSG00000131759 CDS Human protein_coding chr17:38497843 chr17:38497847 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_113127 0 0 1 FAM120A POSTAR2 ENCODE chr17:38497847-38497909
64251 chr11 57457548 57457548 1 + C T UCEC 57457547 + 57457527 57457567 41 GTGAATAACTGTATTGGTCGCCGGAACTACCGTTATTTTTT GTGAATAACTGTATTGGTCGCTGGAACTACCGTTATTTTTT < 41bp 0.489012398250459 0.735001107167127 0.60596603 0.4688841 prediction 0.470002214334254 Functional Gain - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57457547 chr11:57457548 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_113129 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:57457529-57457558
64251 chr1 91967324 91967324 1 + C G LUAD 91967320 + 91967300 91967340 41 GGATGAGCCAATGGCTTTTTCTCCCCAGCGTGACCGGTTTC GGATGAGCCAATGGCTTTTTCTCCGCAGCGTGACCGGTTTC < 41bp 0.613846223000322 0.848837278050724 0.13536099 0.2596345 prediction 0.469982110100804 Functional Gain - CDC7 ENSG00000097046 CDS Human protein_coding chr1:91967320 chr1:91967324 synonymous SNV . 0 25 hm5C_associated_SNPs_113134 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr1:91967297-91967340
64251 chr1 11718626 11718626 1 + C T UCEC 11718625 + 11718605 11718645 41 CCAGGTGGTGGACCTCAAGGCCGAAGGGTATTGGGAGGAGC CCAGGTGGTGGACCTCAAGGCTGAAGGGTATTGGGAGGAGC < 41bp 0.540404273881512 0.775389850241401 0.3087405 0.39344925 prediction 0.469971152719777 Functional Gain - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11718625 chr1:11718626 stopgain 0.984 0 22 hm5C_associated_SNPs_113135 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:11718625-11718656
64251 chr20 21687508 21687508 1 + C T STAD 21687507 + 21687487 21687527 41 CGTACGAGGCAAGTAAGCAGCCGCCGTCGCAGCCTACGCTG CGTACGAGGCAAGTAAGCAGCTGCCGTCGCAGCCTACGCTG < 41bp 0.491721670312905 0.734984959462288 0.35483006 0.5017627 prediction 0.469969918924576 Functional Gain - PAX1 ENSG00000125813 CDS Human protein_coding chr20:21687507 chr20:21687508 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_113136 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:21687500-21687529
64251 chr15 64444007 64444007 1 + C A rs368005220 64444006 + 64443986 64444026 41 TCACATCCCGTCGGTGGGGCCCGAGGCCGAGGGGCCCAGGC TCACATCCCGTCGGTGGGGCCAGAGGCCGAGGGGCCCAGGC < 41bp 0.545687990902687 0.780670167123955 0.8110044 0.89888906 prediction 0.469964352442534 Functional Gain - SNX22 ENSG00000157734 CDS Human protein_coding chr15:64444006 chr15:64444007 synonymous SNV . 0 22 hm5C_associated_SNPs_113137 0 0 3 EFTUD2 POSTAR2 ENCODE chr15:64443994-64444019
64251 chr17 79205475 79205475 1 - G A SKCM 79205476 - 79205456 79205496 41 GGCAGGGTCGAGGTGGTGGCCCTGAGTGACTGTCAGCAGGA GGCAGGGTCGAGGTGGTGGCCTTGAGTGACTGTCAGCAGGA < 41bp 0.536657959678933 0.771634786226379 0.18614873 0.2548343 prediction 0.46995365309489 Functional Gain - TEPSIN ENSG00000167302 CDS Human protein_coding chr17:79205476 chr17:79205475 synonymous SNV . 0 22 hm5C_associated_SNPs_113138 0 0 2 PPIG POSTAR2 ENCODE chr17:79205463-79205489
64251 chr11 134131676 134131676 1 + C T STAD 134131675 + 134131655 134131695 41 TATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCA TATGGCAACAAGGCTGGTGGCTGCGCGGCTGATGGTCCGCA < 41bp 0.487399860889882 0.734966523492622 0.3226592 0.23110366 prediction 0.469933046985245 Functional Gain - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134131675 chr11:134131676 synonymous SNV . 0 22 hm5C_associated_SNPs_113139 0 0 1 PPIG POSTAR2 ENCODE chr11:134131656-134131724
64251 chr11 65392945 65392945 1 + C T SKCM 65392944 + 65392924 65392964 41 GGAGACAGCCCGGGCCGAGCCCCCGGACCCCTTGCCGGACA GGAGACAGCCCGGGCCGAGCCTCCGGACCCCTTGCCGGACA < 41bp 0.555899610384869 0.790859247816289 0.34260625 0.78845894 prediction 0.46991927486284 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392944 chr11:65392945 synonymous SNV . 0 22 hm5C_associated_SNPs_113140 0 0 5 BUD13 POSTAR2 ENCODE chr11:65392887-65392950
64251 chr2 200826597 200826597 1 + T A LUSC 200826593 + 200826573 200826613 41 TAAGAGGAGCCAGTGTATTCCAGGTTAAGTTGGGGAATCAG TAAGAGGAGCCAGTGTATTCCAGGATAAGTTGGGGAATCAG < 41bp 0.644501708580014 0.879434229972279 0.4610764 0.6122866 prediction 0.469865042784529 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200826593 chr2:200826597 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_113145 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:200826591-200826620
64251 chr11 65412462 65412462 1 + C T COAD 65412461 + 65412441 65412481 41 AAGGTGGGCATCCTGTACTGCCGGGCGGGCCAGGGCTCGGA AAGGTGGGCATCCTGTACTGCTGGGCGGGCCAGGGCTCGGA < 41bp 0.525506571902731 0.760436983433114 0.23375246 0.20953527 prediction 0.469860823060766 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65412461 chr11:65412462 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_113147 0 0 1 METAP2 POSTAR2 ENCODE chr11:65412428-65412476
64251 chr11 65392946 65392946 1 + C T SKCM 65392945 + 65392925 65392965 41 GAGACAGCCCGGGCCGAGCCCCCGGACCCCTTGCCGGACAA GAGACAGCCCGGGCCGAGCCCTCGGACCCCTTGCCGGACAA < 41bp 0.547166543476304 0.782090770619495 0.33647662 0.28267524 prediction 0.469848454286381 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392945 chr11:65392946 nonsynonymous SNV 0.938 0 22 hm5C_associated_SNPs_113150 0 0 5 BUD13 POSTAR2 ENCODE chr11:65392887-65392950
64251 chr11 94731230 94731230 1 + C T SKCM 94731229 + 94731209 94731249 41 CGCCTGGCCAGGGAGCTCTTCCCAGGCAGTTCCCGGGGTTG CGCCTGGCCAGGGAGCTCTTCTCAGGCAGTTCCCGGGGTTG < 41bp 0.491430042162377 0.734910666007002 0.44016203 0.6354584 prediction 0.469821332014005 Functional Gain - KDM4D ENSG00000186280 CDS Human protein_coding chr11:94731229 chr11:94731230 nonsynonymous SNV 0.877 3 22 hm5C_associated_SNPs_113155 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:94731223-94731246
64251 chr4 1809202 1809202 1 + C G rs17884965 1809201 + 1809181 1809221 41 GCCTCCAGGTGCAGAGGTACCCTGGGTGTCCCCGCTGCTGT GCCTCCAGGTGCAGAGGTACCGTGGGTGTCCCCGCTGCTGT < 41bp 0.62975946546698 0.864661670261139 0.86045456 0.90532285 prediction 0.469804409588317 Functional Gain - FGFR3 ENSG00000068078 UTR3 Human protein_coding chr4:1809201 chr4:1809202 . . 0 22 hm5C_associated_SNPs_113158 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr4:1809102-1809220
64251 chr7 44796724 44796724 1 + C T SKCM 44796723 + 44796703 44796743 41 TGTACAGCCGCGGGGGCTACCCTGGGGCCCCCGGCTTCACC TGTACAGCCGCGGGGGCTACCTTGGGGCCCCCGGCTTCACC < 41bp 0.54182200737039 0.776723724307157 0.90847194 0.39171392 prediction 0.469803433873534 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44796723 chr7:44796724 nonsynonymous SNV 0.942 4 22 hm5C_associated_SNPs_113159 0 0 1 PPIG POSTAR2 ENCODE chr7:44796683-44796727
64251 chr19 54695428 54695428 1 + C A LGG 54695427 + 54695407 54695447 41 CGCCGTGACTCTGGTCAGCGCCCCGCGTCCAGACTCTCGGC CGCCGTGACTCTGGTCAGCGCACCGCGTCCAGACTCTCGGC < 41bp 0.47345076788479 0.734898900667502 0.3226041 0.4060981 prediction 0.469797801335004 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54695427 chr19:54695428 synonymous SNV . 0 22 hm5C_associated_SNPs_113160 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:54695411-54695433
64251 chr11 117062657 117062657 1 + C A LUAD 117062656 + 117062636 117062676 41 AGCTCTACCAGAAGCGGCACCCGGACATCAACGCCAGCGCC AGCTCTACCAGAAGCGGCACCAGGACATCAACGCCAGCGCC < 41bp 0.573056386742608 0.807951624213224 0.49566868 0.73491174 prediction 0.469790474941232 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117062656 chr11:117062657 nonsynonymous SNV 0.826 4 22 hm5C_associated_SNPs_113162 0 0 2 BUD13 POSTAR2 ENCODE chr11:117062565-117062665
64251 chr9 34343328 34343328 1 + C G BRCA 34343327 + 34343307 34343347 41 ATCCGCCTCTCCCATGAGCACCAAGCCTACCGCTGGCTGGG ATCCGCCTCTCCCATGAGCACGAAGCCTACCGCTGGCTGGG < 41bp 0.413531322556529 0.734894074180705 0.15404445 0.42630878 prediction 0.469788148361411 Functional Gain - NUDT2 ENSG00000164978 CDS Human protein_coding chr9:34343327 chr9:34343328 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_113163 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:34343324-34343352
64251 chr8 28908624 28908624 1 + C T SKCM 28908623 + 28908603 28908643 41 CCACACTATCTTGGCATTGGCCCGACAAGGAGCCAACGAAA CCACACTATCTTGGCATTGGCTCGACAAGGAGCCAACGAAA < 41bp 0.523770048220877 0.758656505735923 0.1012229 0.27613604 prediction 0.469772915030093 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28908623 chr8:28908624 synonymous SNV . 0 22 hm5C_associated_SNPs_113166 0 0 3 GRWD1 POSTAR2 ENCODE chr8:28908530-28908659
64251 chr5 148682070 148682070 1 + T C LIHC 148682068 + 148682048 148682088 41 CTCTGGGACCCGGCAAGTCGCCTGAGTACATCAGCTCCCAC CTCTGGGACCCGGCAAGTCGCCCGAGTACATCAGCTCCCAC < 41bp 0.592272757445673 0.827148910214167 0.26334894 0.37474483 prediction 0.469752305536988 Functional Gain - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148682068 chr5:148682070 synonymous SNV . 0 23 hm5C_associated_SNPs_113171 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr5:148682035-148682089
64251 chr4 159790453 159790453 1 + C T PRAD 159790452 + 159790432 159790472 41 AGGACTGAAGGAGACATTCCCCGAAATGAAAGCTCAGATAG AGGACTGAAGGAGACATTCCCTGAAATGAAAGCTCAGATAG < 41bp 0.542537795884947 0.777413153994347 0.1862759 0.1735912 prediction 0.469750716218799 Functional Gain - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159790452 chr4:159790453 stopgain 0.907 1 22 hm5C_associated_SNPs_113172 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr4:159790434-159790472
64251 chr14 37132701 37132701 1 + C A COAD 37132700 + 37132680 37132720 41 TCGCACTCCGTCACCGACATCCTGGGCATCCGCTCCATCAC TCGCACTCCGTCACCGACATCATGGGCATCCGCTCCATCAC < 41bp 0.471506379402428 0.734855840136594 0.21004057 0.41421735 prediction 0.469711680273187 Functional Gain - PAX9 ENSG00000198807 CDS Human protein_coding chr14:37132700 chr14:37132701 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113182 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:37132695-37132722
64251 chr1 15370623 15370623 1 + C T GBM 15370622 + 15370602 15370642 41 CAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGC CAGCTGGACCTCAAGGACAACTGGATGAAGGAGCTGGAGGC < 41bp 0.532950636746149 0.767801487190435 0.8861742 0.409948 prediction 0.469701700888572 Functional Gain - KAZN ENSG00000189337 CDS Human protein_coding chr1:15370622 chr1:15370623 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_113184 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:15370617-15370637
64251 chr1 161645092 161645092 1 + C A LUAD 161645091 + 161645071 161645111 41 GGGAAATGGGAGAGACCCTCCCTGAGAAACCAGGTGAGTAC GGGAAATGGGAGAGACCCTCCATGAGAAACCAGGTGAGTAC < 41bp 0.55513942332935 0.78998449545195 0.06753206 0.14799786 prediction 0.4696901442452 Functional Gain - FCGR2B ENSG00000072694 CDS Human protein_coding chr1:161645091 chr1:161645092 nonsynonymous SNV 0.025 3 22 hm5C_associated_SNPs_113185 0 0 1 SND1 POSTAR2 ENCODE chr1:161645046-161645105
64251 chr1 32636331 32636331 1 + C T SKCM 32636330 + 32636310 32636350 41 TTGGATAAAATTGAGTTTCTCCAGAGCCACGAGAACCAGGA TTGGATAAAATTGAGTTTCTCTAGAGCCACGAGAACCAGGA < 41bp 0.497913076474158 0.734820353188229 0.8790605 0.69864434 prediction 0.469640706376458 Functional Gain - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32636330 chr1:32636331 stopgain 1.000 1 22 hm5C_associated_SNPs_113187 0 0 11 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:32636313-32636336
64251 chr19 3115012 3115012 1 + C T LUAD 3115011 + 3114991 3115031 41 CAGCAGGACGTGCTGCGGGTCCGCGTGCCCACCACCGGCAT CAGCAGGACGTGCTGCGGGTCTGCGTGCCCACCACCGGCAT < 41bp 0.543952003393255 0.778761718406645 0.19954947 0.109330714 prediction 0.46961943002678 Functional Gain - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3115011 chr19:3115012 nonsynonymous SNV 0.991 5 22 hm5C_associated_SNPs_113191 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:3115002-3115030
64251 chr5 76342465 76342465 1 + T G SKCM 76342462 + 76342442 76342482 41 AGTTATGACGAAGCCATTACCAGTGAAGGCAATGTAACTGC AGTTATGACGAAGCCATTACCAGGGAAGGCAATGTAACTGC < 41bp 0.685825246457406 0.920632108501812 0.14270863 0.92560387 prediction 0.469613724088812 Functional Gain - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76342462 chr5:76342465 nonsynonymous SNV 0.280 3 24 hm5C_associated_SNPs_113194 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:76342422-76342471
64251 chr19 50306316 50306316 1 + C A rs73934048 50306315 + 50306295 50306335 41 GGACAGGTGCGGAGCCCAGGCCAGGTGCAGACAGGCACCCC GGACAGGTGCGGAGCCCAGGCAAGGTGCAGACAGGCACCCC < 41bp 0.529008421875433 0.763802340744802 0.7572329 0.51471275 prediction 0.46958783773874 Functional Gain - AP2A1 ENSG00000196961 intronic Human protein_coding chr19:50306315 chr19:50306316 . . 0 22 hm5C_associated_SNPs_113197 0 0 4 EFTUD2 POSTAR2 ENCODE chr19:50306295-50306332
64251 chr2 220113242 220113242 1 + T G rs7601549 220113240 + 220113220 220113260 41 TCCTCAGTCAGCTGGAGGCGCTTCAGCCCCCAGCTCCTGGC TCCTCAGTCAGCTGGAGGCGCTGCAGCCCCCAGCTCCTGGC < 41bp 0.655449609669914 0.890242095657764 0.25716072 0.2703749 prediction 0.469584971975699 Functional Gain - STK16 ENSG00000115661 CDS Human protein_coding chr2:220113240 chr2:220113242 synonymous SNV . 0 23 hm5C_associated_SNPs_113198 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:220113242-220113274
64251 chr5 110463710 110463710 1 + C A rs183583946 110463706 + 110463686 110463726 41 CTGAGTATACTTTTCTTTCACAACCATTGCAAACCCAGGTA CTGAGTATACTTTTCTTTCACAACAATTGCAAACCCAGGTA < 41bp 0.350372858506818 0.734784558817921 0.09604177 0.18532443 prediction 0.469569117635842 Functional Gain - WDR36 ENSG00000134987 UTR3 Human protein_coding chr5:110463706 chr5:110463710 . . 0 25 hm5C_associated_SNPs_113201 1 0 12 ELAVL1 POSTAR2 GSE28865,GSM714641 chr5:110463554-110463830
64251 chr8 124141340 124141340 1 + C A rs55959319 124141336 + 124141316 124141356 41 GAAGATATGCAAGCTAAAGTCGACCAGCAAAGAGTTGAAGA GAAGATATGCAAGCTAAAGTCGACAAGCAAAGAGTTGAAGA < 41bp 0.319817523936063 0.734769092507683 0.16401666 0.18487445 prediction 0.469538185015365 Functional Gain - TBC1D31 ENSG00000156787 CDS Human protein_coding chr8:124141336 chr8:124141340 nonsynonymous SNV 0.520 0 25 hm5C_associated_SNPs_113205 0 0 2 ZNF622 POSTAR2 ENCODE chr8:124141329-124141397
64251 chr6 158349734 158349734 1 + C T PAAD 158349733 + 158349713 158349753 41 CACTGGAAGCGCTGCACGGGCCGTAAGTCCACTCCTCACAG CACTGGAAGCGCTGCACGGGCTGTAAGTCCACTCCTCACAG < 41bp 0.544532561999356 0.779295902643815 0.09172946 0.06414434 prediction 0.46952668128892 Functional Gain - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158349733 chr6:158349734 nonsynonymous SNV 0.342 3 22 hm5C_associated_SNPs_113207 0 0 1 SF3B4 POSTAR2 ENCODE chr6:158349730-158349775
64251 chr8 96044275 96044275 1 + C T STAD 96044274 + 96044254 96044294 41 CTGCTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCACT CTGCTGCTCCCTGCAGAATCCTGAAGCTCTGTTTTTGCACT < 41bp 0.481482208684555 0.734761892304681 0.38824707 0.44514576 prediction 0.469523784609362 Functional Gain - NDUFAF6 ENSG00000156170 CDS Human protein_coding chr8:96044274 chr8:96044275 stopgain 0.994 0 22 hm5C_associated_SNPs_113208 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:96044246-96044284
64251 chr4 88902885 88902885 1 + C A LUAD 88902884 + 88902864 88902904 41 ACAGTAGACACATATGATGGCCGAGGTGATAGTGTGGTTTA ACAGTAGACACATATGATGGCAGAGGTGATAGTGTGGTTTA < 41bp 0.478274710236002 0.734760198365609 0.23565766 0.77886885 prediction 0.469520396731218 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88902884 chr4:88902885 synonymous SNV . 0 22 hm5C_associated_SNPs_113210 0 0 5 GRWD1 POSTAR2 ENCODE chr4:88902814-88902885
64251 chr20 37400374 37400374 1 + C A rs3752289 37400370 + 37400350 37400390 41 ACATCTATGTCCCCATCCGCCTGCCGAAGCAGGCCTCCCGC ACATCTATGTCCCCATCCGCCTGCAGAAGCAGGCCTCCCGC < 41bp 0.694412901617324 0.929165990995549 0.07625121 0.16179657 prediction 0.46950617875645 Functional Gain - ACTR5 ENSG00000101442 CDS Human protein_coding chr20:37400370 chr20:37400374 nonsynonymous SNV 0.910 4 25 hm5C_associated_SNPs_113214 0 0 1 UCHL5 POSTAR2 ENCODE chr20:37400360-37400409
64251 chr1 84543970 84543970 1 + C A rs199581787 84543966 + 84543946 84543986 41 AGTGGCGGGCACGGCCCCAGCCCCCCTTCCCTTCCCTGACC AGTGGCGGGCACGGCCCCAGCCCCACTTCCCTTCCCTGACC < 41bp 0.44605966598699 0.734740940868142 0.03273213 0.08255333 prediction 0.469481881736284 Functional Gain - PRKACB ENSG00000142875 UTR5 Human protein_coding chr1:84543966 chr1:84543970 . . 0 25 hm5C_associated_SNPs_113216 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:84543963-84544006
64251 chr11 118243308 118243308 1 + C T SKCM 118243307 + 118243287 118243327 41 TACCCGAACAGTTCTTCTCACCCCAGAGATCTATGTTGACC TACCCGAACAGTTCTTCTCACTCCAGAGATCTATGTTGACC < 41bp 0.454187521075896 0.734736170917047 0.04244247 0.9060279 prediction 0.469472341834093 Functional Gain - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118243307 chr11:118243308 synonymous SNV . 0 22 hm5C_associated_SNPs_113218 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118243274-118243312
64251 chr19 42396676 42396676 1 + C G OV 42396675 + 42396655 42396695 41 CCCATGTGTGTCCCTGCAGACCGCACTAGGGCTGACCTCAT CCCATGTGTGTCCCTGCAGACGGCACTAGGGCTGACCTCAT < 41bp 0.422156667946078 0.734735627702529 0.15603188 0.36133128 prediction 0.469471255405058 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42396675 chr19:42396676 nonsynonymous SNV 0.026 5 22 hm5C_associated_SNPs_113219 0 0 5 BUD13 POSTAR2 ENCODE chr19:42396674-42396720
64251 chr11 70049728 70049728 1 + C A CESC 70049727 + 70049707 70049747 41 ATGCTGCTGGAGCAGAACGACCTGGAGCCCGGGCACACCGA ATGCTGCTGGAGCAGAACGACATGGAGCCCGGGCACACCGA < 41bp 0.547121800629151 0.781842007530995 0.08769572 0.06532627 prediction 0.469440413803687 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70049727 chr11:70049728 nonsynonymous SNV 0.966 4 22 hm5C_associated_SNPs_113225 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:70049708-70049736
64251 chr17 30615964 30615964 1 + C T COAD 30615963 + 30615943 30615983 41 ACCCTGCCCCGGGAAATTGACCGCAAGTGGTACTATGACAG ACCCTGCCCCGGGAAATTGACTGCAAGTGGTACTATGACAG < 41bp 0.590321546012103 0.825041530538927 0.08312699 0.07207 prediction 0.469439969053647 Functional Gain - RHBDL3 ENSG00000141314 CDS Human protein_coding chr17:30615963 chr17:30615964 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113226 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:30615942-30615976
64251 chr1 36767165 36767165 1 + C T UCEC 36767164 + 36767144 36767184 41 ATTGCAATAGCAGTTTCGAGCCAGAGGAAGAGGCTGGGGCA ATTGCAATAGCAGTTTCGAGCTAGAGGAAGAGGCTGGGGCA < 41bp 0.552863382779838 0.787577415401703 0.902232 0.42033774 prediction 0.469428065243728 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36767164 chr1:36767165 synonymous SNV . 0 22 hm5C_associated_SNPs_113230 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:36767157-36767185
64251 chr12 132404096 132404096 1 + C A rs543744479 132404095 + 132404075 132404115 41 CAAAGTGCCATCGACCAGATCCGGGCCGGCAAGCTCTGCCT CAAAGTGCCATCGACCAGATCAGGGCCGGCAAGCTCTGCCT < 41bp 0.557777933345567 0.792478346740438 0.88316417 0.92153543 prediction 0.469400826789742 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132404095 chr12:132404096 synonymous SNV . 0 22 hm5C_associated_SNPs_113231 0 0 2 PPIG POSTAR2 ENCODE chr12:132404082-132404134
64251 chr19 30303617 30303617 1 + C A rs139551337 30303616 + 30303596 30303636 41 GGATGCGAAGGAGCGGGACACCATGAAGGAGGACGGCGGCG GGATGCGAAGGAGCGGGACACAATGAAGGAGGACGGCGGCG < 41bp 0.477315562546838 0.734695976456763 0.35098073 0.7497772 prediction 0.469391952913526 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30303616 chr19:30303617 synonymous SNV . 0 22 hm5C_associated_SNPs_113233 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:30303617-30303618
64251 chr17 72832671 72832671 1 + C T COAD 72832670 + 72832650 72832690 41 GCCTTCCTGGTGTACCACTGCCGCAGGGACACCCAGCTGGC GCCTTCCTGGTGTACCACTGCTGCAGGGACACCCAGCTGGC < 41bp 0.557849140137769 0.792544607760028 0.29364857 0.27714452 prediction 0.469390935244518 Functional Gain - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72832670 chr17:72832671 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_113234 0 0 1 SND1 POSTAR2 ENCODE chr17:72832480-72832725
64251 chr17 691271 691271 1 + C A COAD 691267 + 691247 691287 41 AGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTTGT AGACTCAGCTTCAGCATTCACTGCATTTATTATTGATTTGT < 41bp 0.302678576162976 0.734695064160368 0.020448178 0.05693835 prediction 0.469390128320735 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:691267 chr17:691271 nonsynonymous SNV 0.963 4 25 hm5C_associated_SNPs_113235 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:691252-691315
64251 chr11 117152949 117152949 1 + C A COAD 117152948 + 117152928 117152968 41 GTAGACAAACTGGAGAAGATCCTGGAGAAGCTGCTGACCCG GTAGACAAACTGGAGAAGATCATGGAGAAGCTGCTGACCCG < 41bp 0.476140681105366 0.734686350740608 0.8672222 0.8901856 prediction 0.469372701481215 Functional Gain - RNF214 ENSG00000167257 CDS Human protein_coding chr11:117152948 chr11:117152949 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_113239 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr11:117152945-117152968
64251 chr1 87805252 87805252 1 + C A LUAD 87805248 + 87805228 87805268 41 AAATAGCGGTGCTTGCAGCGCTTGCGGACAGTCGATTCCTG AAATAGCGGTGCTTGCAGCGCTTGAGGACAGTCGATTCCTG < 41bp 0.316195905250266 0.734679849024068 0.31854573 0.29221568 prediction 0.469359698048137 Functional Gain - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805248 chr1:87805252 stopgain 0.469 1 25 hm5C_associated_SNPs_113241 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805221-87805288
64251 chr7 75933167 75933167 1 + T G LUSC 75933165 + 75933145 75933185 41 CATGGCTACATCTCCCGGTGCTTCACGCGGAAATACACGTG CATGGCTACATCTCCCGGTGCTGCACGCGGAAATACACGTG < 41bp 0.397977220034269 0.734675040192044 0.761675 0.5952515 prediction 0.469350080384087 Functional Gain - HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933165 chr7:75933167 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_113243 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:75933126-75933175
64251 chr6 26459791 26459791 1 + C G rs72500817 26459790 + 26459770 26459810 41 GTTACGCTGCCATCTGTCACCCGAGAAAAATGCTGAGGACA GTTACGCTGCCATCTGTCACCGGAGAAAAATGCTGAGGACA < 41bp 0.408238258540175 0.734670441399311 0.8361067 0.8958328 prediction 0.469340882798623 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26459790 chr6:26459791 synonymous SNV . 0 22 hm5C_associated_SNPs_113245 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:26459767-26459796
64251 chr6 88210933 88210933 1 + C T GBM 88210932 + 88210912 88210952 41 TGCACTGTTTTAATGTTAAACCGGACACTCAGCAAATTACA TGCACTGTTTTAATGTTAAACTGGACACTCAGCAAATTACA < 41bp 0.51633386969251 0.750996666848152 0.036772907 0.030099541 prediction 0.469325594311284 Functional Gain - SLC35A1 ENSG00000164414 CDS Human protein_coding chr6:88210932 chr6:88210933 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_113246 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:88210918-88210940
64251 chr6 151670959 151670959 1 + A G UCEC 151670956 + 151670936 151670976 41 TGTTTCCGGAGAGGACCCTACACAGGGAGCTGACCTCAGTC TGTTTCCGGAGAGGACCCTACACGGGGAGCTGACCTCAGTC < 41bp 0.537283707218132 0.771938938941229 0.21562582 0.79451436 prediction 0.469310463446196 Functional Gain - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151670956 chr6:151670959 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_113248 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr6:151670937-151670968
64251 chr2 118575196 118575196 1 + C A LUAD 118575195 + 118575175 118575215 41 ATAAAAGTTACAAAGTCTCCCCAGAAATCCACTGTATTAAC ATAAAAGTTACAAAGTCTCCCAAGAAATCCACTGTATTAAC < 41bp 0.5447246842275 0.779371016117501 0.061594963 0.24385259 prediction 0.469292663780001 Functional Gain - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118575195 chr2:118575196 nonsynonymous SNV 0.827 0 22 hm5C_associated_SNPs_113253 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118575028-118575210
64251 chr18 9360030 9360030 1 + T G SKCM 9360027 + 9360007 9360047 41 CCTGCTGTAAGGAGTGCATGCTGTGTCTTGGGGCCCTTTGG CCTGCTGTAAGGAGTGCATGCTGGGTCTTGGGGCCCTTTGG < 41bp 0.654288044348691 0.888923764859263 0.42475197 0.8773917 prediction 0.469271441021145 Functional Gain - TWSG1 ENSG00000128791 CDS Human protein_coding chr18:9360027 chr18:9360030 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_113255 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr18:9360001-9360061
64251 chr17 66033600 66033600 1 + C T COAD 66033599 + 66033579 66033619 41 ACTTCTCCGCTGCAGGAAAACCGCAACAACCAGGTAAAAAA ACTTCTCCGCTGCAGGAAAACTGCAACAACCAGGTAAAAAA < 41bp 0.558483156563162 0.79311839615945 0.3701681 0.903246 prediction 0.469270479192576 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66033599 chr17:66033600 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_113256 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:66033568-66033604
64251 chr19 40480501 40480501 1 + C T rs11542840 40480500 + 40480480 40480520 41 GAAGCAGGAGGTGCGGGAGGCCGTGGAGCTCCCGCTCACGC GAAGCAGGAGGTGCGGGAGGCTGTGGAGCTCCCGCTCACGC < 41bp 0.489971917355805 0.734630869008795 0.30419147 0.38527733 prediction 0.46926173801759 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480500 chr19:40480501 synonymous SNV . 0 22 hm5C_associated_SNPs_113257 0 0 5 FMR1 POSTAR2 ENCODE chr19:40480457-40480517
64251 chr16 86602249 86602249 1 + C G rs145346124 86602248 + 86602228 86602268 41 CGGGGACCTGAACCACCTCCCCGGCCACACGTTCGCGGCCC CGGGGACCTGAACCACCTCCCGGGCCACACGTTCGCGGCCC < 41bp 0.424520480416178 0.734629368959547 0.19303542 0.77147424 prediction 0.469258737919094 Functional Gain - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86602248 chr16:86602249 synonymous SNV . 0 22 hm5C_associated_SNPs_113258 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:86602190-86602249
64251 chr2 219301894 219301894 1 + C T rs34509505 219301893 + 219301873 219301913 41 CAACGAGGAGGAGAAGAAGGCCGCAGCAACCACTGCACAGG CAACGAGGAGGAGAAGAAGGCTGCAGCAACCACTGCACAGG < 41bp 0.570512381709382 0.805141219037006 0.13432363 0.1341562 prediction 0.469257674655248 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219301893 chr2:219301894 synonymous SNV . 0 22 hm5C_associated_SNPs_113259 0 0 4 BUD13 POSTAR2 ENCODE chr2:219301822-219301925
64251 chr19 1924653 1924653 1 + C A rs3810415 1924649 + 1924629 1924669 41 AGGTCGGCCGCCCTCCCGTCCTCCCAGAGCTGCTGGCGCTG AGGTCGGCCGCCCTCCCGTCCTCCAAGAGCTGCTGGCGCTG < 41bp 0.318821470406343 0.734615888763764 0.18749157 0.957705 prediction 0.469231777527529 Functional Gain - SCAMP4 ENSG00000227500 UTR3 Human protein_coding chr19:1924649 chr19:1924653 . . 0 25 hm5C_associated_SNPs_113263 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:1924638-1924662
64251 chr15 44853572 44853572 1 + T C rs148692596 44853570 + 44853550 44853590 41 AACCTAAGTTGCTACTAAATCATAGTTCAAAACCTAATAAT AACCTAAGTTGCTACTAAATCACAGTTCAAAACCTAATAAT < 41bp 0.525218965333098 0.759830600778738 0.12812951 0.09718418 prediction 0.469223270891279 Functional Gain - EIF3J ENSG00000104131 UTR3 Human protein_coding chr15:44853570 chr15:44853572 . . 0 23 hm5C_associated_SNPs_113264 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr15:44853560-44853605
64251 chr5 96322292 96322292 1 + A G HNSC 96322289 + 96322269 96322309 41 ACTTGTTCAGGATGAGTTTTCTGAGAGTGTGAAGATGAGCA ACTTGTTCAGGATGAGTTTTCTGGGAGTGTGAAGATGAGCA < 41bp 0.505824738522733 0.740414312030292 0.2611807 0.54418933 prediction 0.469179147015117 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96322289 chr5:96322292 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_113271 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr5:96322252-96322297
64251 chr1 160340859 160340859 1 + A G LUAD 160340856 + 160340836 160340876 41 GCCCCCCGACAAGAAGCTCTCCAAGATTGAGATTCTGCGCC GCCCCCCGACAAGAAGCTCTCCAGGATTGAGATTCTGCGCC < 41bp 0.494251941386768 0.734589044485991 0.4138552 0.9214099 prediction 0.469178088971983 Functional Gain - NHLH1 ENSG00000171786 CDS Human protein_coding chr1:160340856 chr1:160340859 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_113272 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:160340857-160340881
64251 chr4 48027157 48027157 1 + T A PRAD 48027153 + 48027133 48027173 41 AGATCACAAATGTGTCACAGCTGCTGGCTTCTCCTGTGCTC AGATCACAAATGTGTCACAGCTGCAGGCTTCTCCTGTGCTC < 41bp 0.652530770407132 0.887116480439096 0.34001556 0.30020452 prediction 0.469171420063928 Functional Gain - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48027153 chr4:48027157 nonsynonymous SNV 0.503 0 25 hm5C_associated_SNPs_113274 0 0 2 DDX3X POSTAR2 ENCODE chr4:48027136-48027192
64251 chr17 19284385 19284385 1 + C A UCEC 19284381 + 19284361 19284401 41 CCCCATCACCAGCCGTGATTCAGGCTGTGGGGGCTGAGAGG CCCCATCACCAGCCGTGATTCAGGATGTGGGGGCTGAGAGG < 41bp 0.696294170469665 0.930871514977061 0.91202307 0.921705 prediction 0.469154689014793 Functional Gain - MAPK7 ENSG00000166484 CDS Human protein_coding chr17:19284381 chr17:19284385 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_113276 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:19284338-19284391
64251 chr20 30414453 30414453 1 + C T LUSC 30414452 + 30414432 30414472 41 GTCATGAACCAGCTGAACCACCGCAATCTGATCCAGCTGTA GTCATGAACCAGCTGAACCACTGCAATCTGATCCAGCTGTA < 41bp 0.579827005230215 0.814400809347766 0.1600014 0.3103053 prediction 0.469147608235102 Functional Gain - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30414452 chr20:30414453 nonsynonymous SNV 0.990 2 22 hm5C_associated_SNPs_113277 1 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr20:30414451-30414478
64251 chr11 118403023 118403023 1 + T A LUSC 118403019 + 118402999 118403039 41 GGACAGCTGCAGGAGGCCAGCACCTCAAGACTGCTGAGCGT GGACAGCTGCAGGAGGCCAGCACCACAAGACTGCTGAGCGT < 41bp 0.650295716118959 0.884864280100904 0.21028712 0.23344436 prediction 0.469137127963891 Functional Gain - TMEM25 ENSG00000149582 CDS Human protein_coding chr11:118403019 chr11:118403023 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_113279 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr11:118402991-118403027
64251 chr21 45500005 45500005 1 + C A UCEC 45500001 + 45499981 45500021 41 TTTGCCAGCCAGCCGTCAGACAGCCCAGGTAAGACCAGTTC TTTGCCAGCCAGCCGTCAGACAGCACAGGTAAGACCAGTTC < 41bp 0.31243773764137 0.734568007840228 0.2777087 0.24964708 prediction 0.469136015680456 Functional Gain - TRAPPC10 ENSG00000160218 CDS Human protein_coding chr21:45500001 chr21:45500005 nonsynonymous SNV 0.107 0 25 hm5C_associated_SNPs_113280 0 0 5 BUD13 POSTAR2 ENCODE chr21:45499965-45500022
64251 chr2 37316823 37316823 1 + C T UCEC 37316822 + 37316802 37316842 41 TTGCCAATGCTAAGGCAAATCCGAGAAGCCCGTCGAAAAGA TTGCCAATGCTAAGGCAAATCTGAGAAGCCCGTCGAAAAGA < 41bp 0.497711410213992 0.734558297191111 0.2518193 0.17914921 prediction 0.469116594382221 Functional Gain - GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37316822 chr2:37316823 stopgain 1.000 1 22 hm5C_associated_SNPs_113281 0 0 2 ZNF622 POSTAR2 ENCODE chr2:37316778-37316841
64251 chr2 106498356 106498356 1 + C G SKCM 106498352 + 106498332 106498372 41 CCTGCCCTGCACCCTGCGCACGCCCCACAGATAAGCTACAC CCTGCCCTGCACCCTGCGCACGCCGCACAGATAAGCTACAC < 41bp 0.453134965833856 0.734557525849312 0.06252751 0.119487494 prediction 0.469115051698624 Functional Gain - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106498352 chr2:106498356 nonsynonymous SNV 0.341 1 25 hm5C_associated_SNPs_113282 0 0 1 SLTM POSTAR2 ENCODE chr2:106498336-106498439
64251 chr3 50251714 50251714 1 + C T UCEC 50251713 + 50251693 50251733 41 GGGCTGCTCCCGGTCATCACCCCCATGGCAGGCAACCAGAG GGGCTGCTCCCGGTCATCACCTCCATGGCAGGCAACCAGAG < 41bp 0.521012051298676 0.755543543019195 0.04586941 0.9670514 prediction 0.469062983441037 Functional Gain - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50251713 chr3:50251714 . 0.003 0 22 hm5C_associated_SNPs_113288 0 0 3 DDX3X POSTAR2 ENCODE chr3:50251579-50251734
64251 chr5 134223703 134223703 1 + C T SKCM 134223702 + 134223682 134223722 41 ATGGCGCTGGAGCACACTTCCCTGACAGAGAAGAGGAGTAT ATGGCGCTGGAGCACACTTCCTTGACAGAGAAGAGGAGTAT < 41bp 0.554229541970285 0.788754858657068 0.12228516 0.18430975 prediction 0.469050633373565 Functional Gain - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134223702 chr5:134223703 nonsynonymous SNV 0.013 0 22 hm5C_associated_SNPs_113290 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:134223650-134223705
64251 chr6 161413046 161413046 1 + C A UCEC 161413045 + 161413025 161413065 41 CCATGGAGGAGCCGCCGCCACCGCCGCCGCCGCCACCACCG CCATGGAGGAGCCGCCGCCACAGCCGCCGCCGCCACCACCG < 41bp 0.515610491907016 0.750125094668921 0.35157585 0.41999716 prediction 0.469029205523809 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161413045 chr6:161413046 nonsynonymous SNV 0.086 3 22 hm5C_associated_SNPs_113292 0 0 1 SERBP1 POSTAR2 ENCODE chr6:161412988-161413048
64251 chr12 49920395 49920395 1 + C A rs12320104 49920394 + 49920374 49920414 41 TGTCACCTTTCCAATCTAAGCCGAAGCCACAGGTGCCTGAC TGTCACCTTTCCAATCTAAGCAGAAGCCACAGGTGCCTGAC < 41bp 0.461920615737996 0.734510817692126 0.16039553 0.47266293 prediction 0.469021635384252 Functional Gain - SPATS2 ENSG00000123352 UTR3 Human protein_coding chr12:49920394 chr12:49920395 . . 0 22 hm5C_associated_SNPs_113293 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr12:49920367-49920396
64251 chr15 40756083 40756083 1 + A G HNSC 40756080 + 40756060 40756100 41 GATGAGCCGGAGCCAGCCATCCGAAAGAGCTACCAGGCGGT GATGAGCCGGAGCCAGCCATCCGGAAGAGCTACCAGGCGGT < 41bp 0.530570447476502 0.765072667277057 0.4344024 0.8545444 prediction 0.469004439601109 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40756080 chr15:40756083 synonymous SNV . 0 24 hm5C_associated_SNPs_113295 0 0 4 BUD13 POSTAR2 ENCODE chr15:40756033-40756105
64251 chr16 21416285 21416285 1 - A G PRAD 21416287 - 21416267 21416307 41 ATGATAATCTCAAGACACCTCCTGAGTGTCTGCTCACTCCC ATGATAATCTCAAGACACCTCCCGAGTGTCTGCTCACTCCC < 41bp 0.448174050939728 0.734496687272244 0.12762162 0.3432359 prediction 0.468993374544488 Functional Gain - NPIPB3 ENSG00000169246 CDS Human protein_coding chr16:21416287 chr16:21416285 synonymous SNV . 0 23 hm5C_associated_SNPs_113297 0 0 1 HNRNPK POSTAR2 ENCODE chr16:21416192-21416293
64251 chr2 3464042 3464042 1 + C T ESCA 3464041 + 3464021 3464061 41 TCTTACCTTGTAGCCTCTATCCGGCTGTGGAGGTCACGTCT TCTTACCTTGTAGCCTCTATCTGGCTGTGGAGGTCACGTCT < 41bp 0.494470077414765 0.73448870613744 0.94946074 0.93443334 prediction 0.468977412274879 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3464041 chr2:3464042 nonsynonymous SNV 0.273 2 22 hm5C_associated_SNPs_113299 0 0 5 BUD13 POSTAR2 ENCODE chr2:3464026-3464120
64251 chr17 57270975 57270975 1 + C A HNSC 57270974 + 57270954 57270994 41 CTCCAAAGCTGTGCTTCCTCCCACACTGCCACAGCCAGCCA CTCCAAAGCTGTGCTTCCTCCAACACTGCCACAGCCAGCCA < 41bp 0.563565816182146 0.798045258964893 0.053317964 0.038869232 prediction 0.468958885565494 Functional Gain - PRR11 ENSG00000068489 CDS Human protein_coding chr17:57270974 chr17:57270975 synonymous SNV . 0 22 hm5C_associated_SNPs_113303 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:57270939-57270987
64251 chr3 140997283 140997283 1 + C T SKCM 140997282 + 140997262 140997302 41 CGGAGCCCCCTGTGACAGACCCCGTTTATGAAGCTCTTTTG CGGAGCCCCCTGTGACAGACCTCGTTTATGAAGCTCTTTTG < 41bp 0.569554261346943 0.804033171586104 0.010323077 0.029819667 prediction 0.468957820478323 Functional Gain - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:140997282 chr3:140997283 nonsynonymous SNV 0.625 4 22 hm5C_associated_SNPs_113304 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:140997277-140997309
64251 chr11 62546422 62546422 1 + C T LUSC 62546421 + 62546401 62546441 41 GTGCTGTGCTAGGGGATGATCCGCAACTGATGAAGGTGAGC GTGCTGTGCTAGGGGATGATCTGCAACTGATGAAGGTGAGC < 41bp 0.479639803298337 0.734463453859803 0.4765359 0.5368307 prediction 0.468926907719606 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62546421 chr11:62546422 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_113313 0 0 1 PRPF8 POSTAR2 ENCODE chr11:62546408-62546462
64251 chrX 153247965 153247965 1 + C A LUAD 153247961 + 153247941 153247981 41 TCTCTCTTGAGTGCGTCTCCCTGGCCAGTTATGGCCTCGCT TCTCTCTTGAGTGCGTCTCCCTGGACAGTTATGGCCTCGCT < 41bp 0.693624544286128 0.928079681148265 0.57478166 0.75928664 prediction 0.468910273724274 Functional Gain - TMEM187 ENSG00000177854 CDS Human protein_coding chrX:153247961 chrX:153247965 nonsynonymous SNV 0.127 0 25 hm5C_associated_SNPs_113317 0 0 1 SND1 POSTAR2 ENCODE chrX:153247874-153248028
64251 chr5 637890 637890 1 + A G LIHC 637887 + 637867 637907 41 CTTGTCTCAGCCTGAGGCCTCGGAGACTGAGGAGCAGAGGT CTTGTCTCAGCCTGAGGCCTCGGGGACTGAGGAGCAGAGGT < 41bp 0.521716181171169 0.756167987107457 0.91720337 0.9300532 prediction 0.468903611872577 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:637887 chr5:637890 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_113318 0 0 1 EIF3H POSTAR2 ENCODE chr5:637835-637926
64251 chr7 66386335 66386335 1 + T G rs2293350 66386333 + 66386313 66386353 41 GGCGCGGGGAGAAGATGGTGCCTAGCGGCCTCGGGCCCGCC GGCGCGGGGAGAAGATGGTGCCGAGCGGCCTCGGGCCCGCC < 41bp 0.405396732920243 0.73444317926349 0.28198874 0.6573335 prediction 0.46888635852698 Functional Gain - TMEM248 ENSG00000106609 UTR5 Human protein_coding chr7:66386333 chr7:66386335 . . 0 23 hm5C_associated_SNPs_113322 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:66386320-66386340
64251 chr2 219293043 219293043 1 + C A LUAD 219293039 + 219293019 219293059 41 CAGTGGAATGGACCGGAAAGCACCCGTATGGAGAGACTCAG CAGTGGAATGGACCGGAAAGCACCAGTATGGAGAGACTCAG < 41bp 0.308475536109321 0.734440515871946 0.103499204 0.17675385 prediction 0.468881031743893 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219293039 chr2:219293043 nonsynonymous SNV 0.910 0 25 hm5C_associated_SNPs_113324 0 0 4 GRWD1 POSTAR2 ENCODE chr2:219292959-219293060
64251 chr11 65480859 65480859 1 + C T UCEC 65480858 + 65480838 65480878 41 GCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCGC GCGGGAAGACCTTGCCAATCCTGGTCCAGATCACACTCCGC < 41bp 0.503442643220615 0.737877479113048 0.48367116 0.68823874 prediction 0.468869671784865 Functional Gain - KAT5 ENSG00000172977 CDS Human protein_coding chr11:65480858 chr11:65480859 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_113326 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:65480851-65480877
64251 chr12 133295588 133295588 1 + T A rs79067360 133295584 + 133295564 133295604 41 ACCACAGAATGATCCGGGTTCAGGTTGCGTTTTCCCTGCCA ACCACAGAATGATCCGGGTTCAGGATGCGTTTTCCCTGCCA < 41bp 0.577186938727992 0.811620248925454 0.25201437 0.8340372 prediction 0.468866620394923 Functional Gain - PGAM5 ENSG00000247077 UTR3 Human protein_coding chr12:133295584 chr12:133295588 . . 0 25 hm5C_associated_SNPs_113327 0 0 1 RPS5 POSTAR2 ENCODE chr12:133295581-133295623
64251 chr17 6941895 6941895 1 + A G UCEC 6941892 + 6941872 6941912 41 CTACCTGCTGCCTTCCTACTCTCAGTTGTTGCTATTTCTGA CTACCTGCTGCCTTCCTACTCTCGGTTGTTGCTATTTCTGA < 41bp 0.533125844460974 0.76755770611253 0.06852257 0.13820589 prediction 0.468863723303113 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941892 chr17:6941895 synonymous SNV . 0 24 hm5C_associated_SNPs_113328 0 0 1 PCBP2 POSTAR2 ENCODE chr17:6941722-6941903
64251 chr2 74435842 74435842 1 + C A OV 74435838 + 74435818 74435858 41 TGGGGTGTGTGGGAAATAATCAAGCGAACTGGTAGGTATAT TGGGGTGTGTGGGAAATAATCAAGAGAACTGGTAGGTATAT < 41bp 0.693593403775161 0.928021278196169 0.9348633 0.9383862 prediction 0.468855748842016 Functional Gain - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74435838 chr2:74435842 synonymous SNV . 0 25 hm5C_associated_SNPs_113330 0 0 4 GRSF1 POSTAR2 ENCODE chr2:74435762-74435849
64251 chr9 17135259 17135259 1 + C G rs2774619 17135258 + 17135238 17135278 41 GGTGAAGAAGGGTCAGGGGGCCGGCGAGGGCCTGGGGGGGC GGTGAAGAAGGGTCAGGGGGCGGGCGAGGGCCTGGGGGGGC < 41bp 0.611108778428609 0.845528467053111 0.8824066 0.9054242 prediction 0.468839377249005 Functional Gain - CNTLN ENSG00000044459 CDS Human protein_coding chr9:17135258 chr9:17135259 nonsynonymous SNV 0.931 1 22 hm5C_associated_SNPs_113334 0 0 2 BUD13 POSTAR2 ENCODE chr9:17135241-17135316
64251 chr2 69969280 69969280 1 + C G rs544984620 69969276 + 69969256 69969296 41 TGAGTAGGGTGTGACCTCCGCAGCCGCAGAGGAGGAGCGCA TGAGTAGGGTGTGACCTCCGCAGCGGCAGAGGAGGAGCGCA < 41bp 0.605165657035599 0.839573987026426 0.37715834 0.4360806 prediction 0.468816659981654 Functional Gain - ANXA4 ENSG00000196975 UTR5 Human protein_coding chr2:69969276 chr2:69969280 . . 0 25 hm5C_associated_SNPs_113337 0 0 8 TNRC6A POSTAR2 GSE21578,GSM545218 chr2:69969280-69969300
64251 chr11 70281284 70281284 1 + C A rs192809533 70281280 + 70281260 70281300 41 CGGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCTG CGGCAGTAGGGCCCCCAGCCCCCCACCGGAGCTGCGCCCTG < 41bp 0.33330109355803 0.734398328196937 0.041172862 0.04204628 prediction 0.468796656393874 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281280 chr11:70281284 . . 0 25 hm5C_associated_SNPs_113342 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr19 39398142 39398142 1 + T C STAD 39398140 + 39398120 39398160 41 GGCGCGAACCCTGCTGCCCGCATGTACGGTGGCCGCACCCC GGCGCGAACCCTGCTGCCCGCACGTACGGTGGCCGCACCCC < 41bp 0.529246674720557 0.763619943625371 0.43506122 0.54306066 prediction 0.468746537809628 Functional Gain - NFKBIB ENSG00000104825 CDS Human protein_coding chr19:39398140 chr19:39398142 nonsynonymous SNV 0.824 3 23 hm5C_associated_SNPs_113348 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:39398125-39398154
64251 chr11 6413070 6413070 1 + C G LUAD 6413069 + 6413049 6413089 41 TGTGACCTGCCCCTGAGGACCCTGGAGAGCCTGTTGAGTGG TGTGACCTGCCCCTGAGGACCGTGGAGAGCCTGTTGAGTGG < 41bp 0.425163184668269 0.734369465184064 0.21366084 0.37311894 prediction 0.468738930368128 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6413069 chr11:6413070 nonsynonymous SNV 0.989 1 22 hm5C_associated_SNPs_113349 0 0 1 SND1 POSTAR2 ENCODE chr11:6412910-6413083
64251 chr2 32865416 32865416 1 + T G HNSC 32865413 + 32865393 32865433 41 CTACAGCCTGACCTCGAAGCCTATACTACTGTTATTAGCAC CTACAGCCTGACCTCGAAGCCTAGACTACTGTTATTAGCAC < 41bp 0.358057186532725 0.734352980395758 0.015356213 0.007990152 prediction 0.468705960791516 Functional Gain - TTC27 ENSG00000018699 CDS Human protein_coding chr2:32865413 chr2:32865416 nonsynonymous SNV 0.020 1 24 hm5C_associated_SNPs_113354 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:32865400-32865420
64251 chr21 47423790 47423790 1 + C A LUSC 47423789 + 47423769 47423809 41 CAGGTGAATGAGCCCCACATCCGCGTCCTGGTCACCGGCAA CAGGTGAATGAGCCCCACATCAGCGTCCTGGTCACCGGCAA < 41bp 0.541021767532941 0.77536062021066 0.6971565 0.8061355 prediction 0.468677705355437 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47423789 chr21:47423790 nonsynonymous SNV 0.974 2 22 hm5C_associated_SNPs_113357 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr21:47423774-47423810
64251 chr19 47259974 47259974 1 + C T HNSC 47259973 + 47259953 47259993 41 GACCTGTGGCCCTTCTACCCCCGCAATGGCGTCATGACCAA GACCTGTGGCCCTTCTACCCCTGCAATGGCGTCATGACCAA < 41bp 0.559908834389972 0.794239164688935 0.15896636 0.38965642 prediction 0.468660660597926 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259973 chr19:47259974 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_113360 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:47259936-47259974
64251 chr1 45220441 45220441 1 + C T SKCM 45220440 + 45220420 45220460 41 AGGAGTATGACAGTAGTTTTCCAAACTGGGAATTTGCCCGA AGGAGTATGACAGTAGTTTTCTAAACTGGGAATTTGCCCGA < 41bp 0.54510494235852 0.77943206292476 0.39848143 0.04423088 prediction 0.468654241132481 Functional Gain - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45220440 chr1:45220441 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_113361 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45220419-45220451
64251 chr19 7671256 7671256 1 + A G UCEC 7671253 + 7671233 7671273 41 TGGCCCTGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTG TGGCCCTGACCAGCTTGGAGCACGAGCTGCTTTTCTGGGTG < 41bp 0.487054949016903 0.73432639791913 0.11081967 0.28410238 prediction 0.468652795838259 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7671253 chr19:7671256 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_113362 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr19:7671252-7671275
64251 chr8 145583306 145583306 1 + T A rs566814350 145583302 + 145583282 145583322 41 GGTTGGAGCCTCCCCTCTTACGTCTCTGTGCTTGTGGCTCT GGTTGGAGCCTCCCCTCTTACGTCACTGTGCTTGTGGCTCT < 41bp 0.523796910107459 0.758116106142022 0.31208682 0.34030586 prediction 0.468638392069125 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583302 chr8:145583306 nonsynonymous SNV 0.584 0 25 hm5C_associated_SNPs_113363 0 0 8 CPSF3 POSTAR2 GSE37401,GSM917668 chr8:145583287-145583315
64251 chr12 106704917 106704917 1 + C T UCEC 106704916 + 106704896 106704936 41 CCAAGCGATTCTGATTCTTCCCGGTTTTCCGAAAGCATGGC CCAAGCGATTCTGATTCTTCCTGGTTTTCCGAAAGCATGGC < 41bp 0.4953993549274 0.734316339952495 0.24839482 0.20433015 prediction 0.46863267990499 Functional Gain - TCP11L2 ENSG00000166046 CDS Human protein_coding chr12:106704916 chr12:106704917 nonsynonymous SNV 0.922 2 22 hm5C_associated_SNPs_113364 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:106704893-106704931
64251 chr21 44437070 44437070 1 + C T GBM 44437069 + 44437049 44437089 41 GCCCTCAGGGAATTGTGGTGCCGGCGTCCGCGCTGCAGCAG GCCCTCAGGGAATTGTGGTGCTGGCGTCCGCGCTGCAGCAG < 41bp 0.523112058149934 0.757392036821225 0.70743126 0.40585634 prediction 0.468559957342582 Functional Gain - PKNOX1 ENSG00000160199 CDS Human protein_coding chr21:44437069 chr21:44437070 nonsynonymous SNV 0.113 5 22 hm5C_associated_SNPs_113373 0 0 1 DDX24 POSTAR2 ENCODE chr21:44437041-44437108
64251 chr16 68056857 68056857 1 - T C rs201701226 68056860 - 68056840 68056880 41 TTGAACCAGCCGGCGCGCCTCACACTGGGCCGTTGGGAGCG TTGAACCAGCCGGCGCGCCTCACGCTGGGCCGTTGGGAGCG < 41bp 0.535045227457696 0.769324574474737 0.12560108 0.20691583 prediction 0.468558694034083 Functional Gain - DDX28 ENSG00000182810 CDS Human protein_coding chr16:68056860 chr16:68056857 synonymous SNV . 0 24 hm5C_associated_SNPs_113374 0 0 6 EIF3A POSTAR2 GSE65004,GSM1585665 chr16:68056848-68056894
64251 chr19 9949309 9949309 1 + C A CESC 9949308 + 9949288 9949328 41 ACCCGGACCAAGGAGGAGGCCCTGGAGCTGATCAACGGTGA ACCCGGACCAAGGAGGAGGCCATGGAGCTGATCAACGGTGA < 41bp 0.477640646336055 0.734269302828516 0.20172462 0.3366847 prediction 0.468538605657031 Functional Gain - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9949308 chr19:9949309 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_113377 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:9949275-9949313
64251 chr1 149858837 149858837 1 + C G LUAD 149858833 + 149858813 149858853 41 CTGCTGGGCAAAGTCACCATCGCCCAGGGCGGCGTTTTGCC CTGCTGGGCAAAGTCACCATCGCCGAGGGCGGCGTTTTGCC < 41bp 0.56081713959918 0.795085989589064 0.07055807 0.893558 prediction 0.468537699979766 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858833 chr1:149858837 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_113378 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:149858800-149858840
64251 chr11 111753245 111753245 1 + C T rs201320359 111753244 + 111753224 111753264 41 AATGAGAATACCTATTCAAACCGTACCCTGATGGGCAACTG AATGAGAATACCTATTCAAACTGTACCCTGATGGGCAACTG < 41bp 0.486914153964435 0.734267080897113 0.08271775 0.07514387 prediction 0.468534161794226 Functional Gain - C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111753244 chr11:111753245 nonsynonymous SNV 0.799 2 22 hm5C_associated_SNPs_113379 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:111753229-111753252
64251 chr9 135929828 135929828 1 + A G KICH 135929825 + 135929805 135929845 41 CAGTGACTTGCCGGTCAAAGCAAAGCGCAGCACCTACAACT CAGTGACTTGCCGGTCAAAGCAAGGCGCAGCACCTACAACT < 41bp 0.554751891398707 0.789015379768924 0.2707459 0.9033859 prediction 0.468526976740433 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135929825 chr9:135929828 nonsynonymous SNV 0.974 3 24 hm5C_associated_SNPs_113380 0 0 2 DDX24 POSTAR2 ENCODE chr9:135929794-135929829
64251 chr12 13061616 13061616 1 + C T LUSC 13061615 + 13061595 13061635 41 GCCGTGGGCTTCAGCCTAGTCCAGGATGTTATCGCTATTGA GCCGTGGGCTTCAGCCTAGTCTAGGATGTTATCGCTATTGA < 41bp 0.542611307450205 0.776874179439115 0.36461455 0.3060751 prediction 0.468525743977821 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061615 chr12:13061616 stopgain 0.797 1 22 hm5C_associated_SNPs_113381 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:13061600-13061640
64251 chr11 837528 837528 1 + C T GBM 837527 + 837507 837547 41 GTGGATCCGCTCACAGGAGGCCGGTGGCCGTGTGGTCCCAG GTGGATCCGCTCACAGGAGGCTGGTGGCCGTGTGGTCCCAG < 41bp 0.495377620680451 0.734256119271746 0.3731556 0.3384086 prediction 0.468512238543493 Functional Gain - CD151 ENSG00000177697 CDS Human protein_coding chr11:837527 chr11:837528 synonymous SNV . 0 22 hm5C_associated_SNPs_113382 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:837510-837559
64251 chr1 201972553 201972553 1 + C T PRAD 201972552 + 201972532 201972572 41 ACCTACCAGCTGGTCTACTTCCTGGATAAGATCCTCCAGAA ACCTACCAGCTGGTCTACTTCTTGGATAAGATCCTCCAGAA < 41bp 0.567600629221842 0.801846068239038 0.29615086 0.182634 prediction 0.468490878034391 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201972552 chr1:201972553 synonymous SNV . 0 22 hm5C_associated_SNPs_113388 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:201972509-201972559
64251 chr9 130570932 130570932 1 + C T CESC 130570931 + 130570911 130570951 41 GGAGCACCAGCGGTCCAACGCCGCCTTGGCCTTGCAGCTGG GGAGCACCAGCGGTCCAACGCTGCCTTGGCCTTGCAGCTGG < 41bp 0.525913084655062 0.760158179101382 0.27600324 0.20258176 prediction 0.46849018889264 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130570931 chr9:130570932 synonymous SNV . 0 22 hm5C_associated_SNPs_113389 0 0 8 BUD13 POSTAR2 ENCODE chr9:130570872-130570937
64251 chr17 40717957 40717957 1 + A G rs140982382 40717954 + 40717934 40717974 41 CCTGGGCCCTCTTGCAGAAGCGCATTCCCAAGACTCATCAG CCTGGGCCCTCTTGCAGAAGCGCGTTCCCAAGACTCATCAG < 41bp 0.5343643549564 0.768596867821579 0.084466696 0.1537959 prediction 0.468465025730357 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40717954 chr17:40717957 nonsynonymous SNV 0.308 2 24 hm5C_associated_SNPs_113393 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr17:40717929-40717965
64251 chr16 1389222 1389222 1 + C T rs61742684 1389221 + 1389201 1389241 41 CCTGTGGATCCCAGCCTCGGCCTGAGAGCCCTGGCCCCAGA CCTGTGGATCCCAGCCTCGGCTTGAGAGCCCTGGCCCCAGA < 41bp 0.503464409418604 0.737691959639247 0.06589824 0.17748156 prediction 0.468455100441285 Functional Gain - BAIAP3 ENSG00000007516 CDS Human protein_coding chr16:1389221 chr16:1389222 synonymous SNV . 0 22 hm5C_associated_SNPs_113396 0 0 1 DDX24 POSTAR2 ENCODE chr16:1389191-1389245
64251 chr3 158322934 158322934 1 + T A rs141302132 158322930 + 158322910 158322950 41 CATTGAACATGGAAGGAGATCAAATGTTTTGGGGGACAAAC CATTGAACATGGAAGGAGATCAAAAGTTTTGGGGGACAAAC < 41bp 0.441356166202576 0.734227509923779 0.57202053 0.5624229 prediction 0.468455019847558 Functional Gain - MLF1 ENSG00000178053 CDS Human protein_coding chr3:158322930 chr3:158322934 nonsynonymous SNV 0.830 0 25 hm5C_associated_SNPs_113397 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr3:158322914-158322951
64251 chr10 13151269 13151269 1 + C T rs187734249 13151268 + 13151248 13151288 41 GCAGATGAAAGAGCTCCTGACCGAGAACCACCAGCTGAAAG GCAGATGAAAGAGCTCCTGACTGAGAACCACCAGCTGAAAG < 41bp 0.507250646492789 0.741469821886619 0.26047188 0.12567931 prediction 0.46843835078766 Functional Gain - OPTN ENSG00000123240 CDS Human protein_coding chr10:13151268 chr10:13151269 synonymous SNV . 0 22 hm5C_associated_SNPs_113400 0 0 3 PRPF8 POSTAR2 ENCODE chr10:13151265-13151329
64251 chr14 76905906 76905906 1 + C T BLCA 76905905 + 76905885 76905925 41 AGGCGCCGGGCTGGGAGGCACCCCATGCCGCAAGAGCTACG AGGCGCCGGGCTGGGAGGCACTCCATGCCGCAAGAGCTACG < 41bp 0.583797266070903 0.818010699343822 0.037735134 0.9172156 prediction 0.468426866545839 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76905905 chr14:76905906 synonymous SNV . 0 22 hm5C_associated_SNPs_113403 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr14:76905894-76905922
64251 chr3 47449402 47449402 1 + C T SKCM 47449401 + 47449381 47449421 41 GAGGAGAAGGCCAAGCTGCTCCGGGAGATGATGGCCAAGAT GAGGAGAAGGCCAAGCTGCTCTGGGAGATGATGGCCAAGAT < 41bp 0.523301549519461 0.757497527734661 0.8789148 0.5597227 prediction 0.468391956430399 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47449401 chr3:47449402 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_113406 0 0 3 DDX24 POSTAR2 ENCODE chr3:47449391-47449490
64251 chr3 195447901 195447901 1 + C G HNSC 195447897 + 195447877 195447917 41 GGATGGGCTGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTC GGATGGGCTGTCTCTGGGGTCTGGGTCTGCCCCTTTTCTTC < 41bp 0.622384898581187 0.856573168926385 0.05628693 0.34079415 prediction 0.468376540690396 Functional Gain - MUC20 ENSG00000176945 CDS Human protein_coding chr3:195447897 chr3:195447901 nonsynonymous SNV 0.402 2 25 hm5C_associated_SNPs_113411 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:195447873-195447905
64251 chr5 176795190 176795190 1 + C T DLBC 176795189 + 176795169 176795209 41 ACTGCAAACGCCGCCTTGCGCCGAGAGTCTCAGGGCTCCCT ACTGCAAACGCCGCCTTGCGCTGAGAGTCTCAGGGCTCCCT < 41bp 0.524896434830856 0.759083095508266 0.5122952 0.20066866 prediction 0.468373321354819 Functional Gain - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176795189 chr5:176795190 stopgain 0.912 1 22 hm5C_associated_SNPs_113412 0 0 1 GEMIN5 POSTAR2 ENCODE chr5:176795139-176795222
64251 chr3 38180227 38180227 1 + C G rs79867863 38180226 + 38180206 38180246 41 TCCCGGCGCGGGGTCTGCGGCCCCGGTCTCCTCCACATCCT TCCCGGCGCGGGGTCTGCGGCGCCGGTCTCCTCCACATCCT < 41bp 0.645284063690608 0.879467027756788 0.120765865 0.29174852 prediction 0.46836592813236 Functional Gain - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180226 chr3:38180227 synonymous SNV . 0 22 hm5C_associated_SNPs_113413 0 0 3 DDX3X POSTAR2 ENCODE chr3:38180159-38180242
64251 chr2 176957876 176957876 1 + C A LUSC 176957875 + 176957855 176957895 41 CTCTGAGCGCACGGGCTCTTCCTCGTCGTCGTCCTCTTCTG CTCTGAGCGCACGGGCTCTTCATCGTCGTCGTCCTCTTCTG < 41bp 0.549279974445727 0.783461132847151 0.09519762 0.3221513 prediction 0.468362316802847 Functional Gain - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176957875 chr2:176957876 synonymous SNV . 0 22 hm5C_associated_SNPs_113414 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:176957840-176957880
64251 chr20 44044884 44044884 1 + C A UCEC 44044880 + 44044860 44044900 41 CTTGCAGAACCCCCACGCGACAGCCTGCGGGAGGAACTTGT CTTGCAGAACCCCCACGCGACAGCATGCGGGAGGAACTTGT < 41bp 0.389216426414427 0.734178614048356 0.014752001 0.01443705 prediction 0.468357228096712 Functional Gain - PIGT ENSG00000124155 CDS Human protein_coding chr20:44044880 chr20:44044884 nonsynonymous SNV 0.915 3 25 hm5C_associated_SNPs_113417 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:44044860-44044886
64251 chr13 42874908 42874908 1 + T G STAD 42874905 + 42874885 42874925 41 CTCAAACGCCTGCATCTCCACAGTGTGGGTCGTTTGACTTT CTCAAACGCCTGCATCTCCACAGGGTGGGTCGTTTGACTTT < 41bp 0.34384594338937 0.734173807567456 0.034556508 0.24187222 prediction 0.468347615134913 Functional Gain - AKAP11 ENSG00000023516 CDS Human protein_coding chr13:42874905 chr13:42874908 nonsynonymous SNV 0.667 0 24 hm5C_associated_SNPs_113419 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:42874879-42874929
64251 chr8 23114093 23114093 1 + C A LIHC 23114092 + 23114072 23114112 41 CGCAAAGTGGAGTCCTTATCCCAGGAAGCAGAGAGGTAACT CGCAAAGTGGAGTCCTTATCCAAGGAAGCAGAGAGGTAACT < 41bp 0.46596700446647 0.734166324395959 0.3777249 0.8877232 prediction 0.468332648791919 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114092 chr8:23114093 nonsynonymous SNV 0.970 0 22 hm5C_associated_SNPs_113423 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr6 17463242 17463242 1 + A G UCEC 17463239 + 17463219 17463259 41 GTTCCCAGGCAGAAATGGTGCACAGTGCTTTCCAGGCCCAG GTTCCCAGGCAGAAATGGTGCACGGTGCTTTCCAGGCCCAG < 41bp 0.508518212587147 0.742663981799375 0.24972779 0.593587 prediction 0.468291538424455 Functional Gain - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17463239 chr6:17463242 nonsynonymous SNV 0.923 0 24 hm5C_associated_SNPs_113426 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:17463236-17463287
64251 chr12 7028903 7028903 1 + C T SKCM 7028902 + 7028882 7028922 41 GACCAGCTGGGGGCACTCTACCAGGACTTTGTCAGGGACTA GACCAGCTGGGGGCACTCTACTAGGACTTTGTCAGGGACTA < 41bp 0.553716154119173 0.787849185016282 0.842282 0.6893152 prediction 0.468266061794219 Functional Gain - ENO2 ENSG00000111674 CDS Human protein_coding chr12:7028902 chr12:7028903 stopgain 0.997 1 22 hm5C_associated_SNPs_113429 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:7028898-7028919
64251 chr1 151239683 151239683 1 + A G COAD 151239680 + 151239660 151239700 41 TTACGACGTGATGCAGGACCCCGAGTTCCTTCAGAGTGTCC TTACGACGTGATGCAGGACCCCGGGTTCCTTCAGAGTGTCC < 41bp 0.507684160310697 0.741816063736605 0.17240477 0.67598826 prediction 0.468263806851816 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151239680 chr1:151239683 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_113430 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:151239649-151239686
64251 chr2 220047043 220047043 1 + C G LUSC 220047042 + 220047022 220047062 41 CCCGAGACAGTGAGTGGTGGCCTCACTGCTCTGCCCGGCAC CCCGAGACAGTGAGTGGTGGCGTCACTGCTCTGCCCGGCAC < 41bp 0.414239615617249 0.7341120351774 0.03096795 0.04646215 prediction 0.468224070354801 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220047042 chr2:220047043 nonsynonymous SNV 0.706 0 22 hm5C_associated_SNPs_113436 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:220047040-220047060
64251 chr10 72520660 72520660 1 + T C rs10999519 72520658 + 72520638 72520678 41 TTACACTCTGTGTACTGCCCCGTGACTCCCAGCTCAGAGGA TTACACTCTGTGTACTGCCCCGCGACTCCCAGCTCAGAGGA < 41bp 0.469027731236455 0.734111378375958 0.20393267 0.27473623 prediction 0.468222756751917 Functional Gain - ADAMTS14 ENSG00000138316 UTR3 Human protein_coding chr10:72520658 chr10:72520660 . . 0 23 hm5C_associated_SNPs_113437 0 0 1 RBM15 POSTAR2 ENCODE chr10:72520642-72520680
64251 chr11 61205246 61205246 1 + C T ESCA 61205245 + 61205225 61205265 41 GCAGGAGAGAACTGATGAATCCATAGAAACCAAAAGAGCCC GCAGGAGAGAACTGATGAATCTATAGAAACCAAAAGAGCCC < 41bp 0.550430128122254 0.78453776120119 0.1943261 0.32541466 prediction 0.468215266157872 Functional Gain - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61205245 chr11:61205246 synonymous SNV . 0 22 hm5C_associated_SNPs_113440 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:61205213-61205251
64251 chr2 114356220 114356220 1 + C A COAD 114356219 + 114356199 114356239 41 GACCTGGGGCTGGTGAGGGGCCCGGAGGAGCCTTTGCCCGT GACCTGGGGCTGGTGAGGGGCACGGAGGAGCCTTTGCCCGT < 41bp 0.539485489099337 0.773591523406878 0.41753575 0.66730225 prediction 0.468212068615083 Functional Gain - WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114356219 chr2:114356220 . . 0 22 hm5C_associated_SNPs_113442 0 0 1 BUD13 POSTAR2 ENCODE chr2:114356189-114356256
64251 chr11 129321713 129321713 1 + C A rs116821632 129321712 + 129321692 129321732 41 GCGGCATGTGGGCAGCATGCCCAGGTTCCTTGCTGACTCAG GCGGCATGTGGGCAGCATGCCAAGGTTCCTTGCTGACTCAG < 41bp 0.550928136802855 0.785017556400564 0.42240012 0.5507002 prediction 0.468178839195418 Functional Gain - BARX2 ENSG00000043039 UTR3 Human protein_coding chr11:129321712 chr11:129321713 . . 0 22 hm5C_associated_SNPs_113446 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:129321702-129321759
64251 chr12 132400462 132400462 1 + C T STAD 132400461 + 132400441 132400481 41 TCTGCACCCGAGCACTCTCCCCGCACTTCCGGGCTGGGCTG TCTGCACCCGAGCACTCTCCCTGCACTTCCGGGCTGGGCTG < 41bp 0.5487997417099 0.782887336436425 0.47631067 0.5795238 prediction 0.468175189453048 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132400461 chr12:132400462 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_113447 0 0 4 EFTUD2 POSTAR2 ENCODE chr12:132400427-132400492
64251 chr17 40695514 40695514 1 + T A SKCM 40695510 + 40695490 40695530 41 ACGCAGGGGCAGCGTGGAGGCTACTGCTCCGGAGTGTGTAC ACGCAGGGGCAGCGTGGAGGCTACAGCTCCGGAGTGTGTAC < 41bp 0.646226607435019 0.880312277780272 0.17977843 0.44999576 prediction 0.468171340690506 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695510 chr17:40695514 nonsynonymous SNV 0.115 5 25 hm5C_associated_SNPs_113448 0 0 2 RPS3 POSTAR2 ENCODE chr17:40695453-40695537
64251 chr3 49006033 49006033 1 + C T LUSC 49006032 + 49006012 49006052 41 ACTTTGTGTTTCCATTGCTTCCCAATGAAGAATTGAGAGAG ACTTTGTGTTTCCATTGCTTCTCAATGAAGAATTGAGAGAG < 41bp 0.461591474306392 0.734082537434727 0.17382422 0.1841422 prediction 0.468165074869454 Functional Gain - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49006032 chr3:49006033 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_113450 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:49005955-49006039
64251 chr17 27380079 27380079 1 + C A SARC 27380078 + 27380058 27380098 41 TTTCCCAAATATTCGGTTGCCCAGGGGAGAAGTGGGGCTCT TTTCCCAAATATTCGGTTGCCAAGGGGAGAAGTGGGGCTCT < 41bp 0.580360781966528 0.814440917086142 0.90312946 0.911749 prediction 0.468160270239227 Functional Gain - PIPOX ENSG00000179761 CDS Human protein_coding chr17:27380078 chr17:27380079 synonymous SNV . 0 22 hm5C_associated_SNPs_113452 0 0 5 BUD13 POSTAR2 ENCODE chr17:27380069-27380119
64251 chr16 67201793 67201793 1 + A G UCEC 67201790 + 67201770 67201810 41 AGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAATGCCC AGGGAAAGGGAGCTTCAGCCCCGGGGGGCCCAGGAATGCCC < 41bp 0.519217282181906 0.753292491249933 0.28800324 0.8814818 prediction 0.468150418136054 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67201790 chr16:67201793 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_113455 0 0 1 ZNF622 POSTAR2 ENCODE chr16:67201772-67201799
64251 chr21 45746602 45746602 1 + C T COAD 45746601 + 45746581 45746621 41 ATCCCCGTCCTGCACAGGCACCGCATGCCACGGGAGCAGTG ATCCCCGTCCTGCACAGGCACTGCATGCCACGGGAGCAGTG < 41bp 0.547900746485022 0.781973113732327 0.03317955 0.085672826 prediction 0.46814473449461 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45746601 chr21:45746602 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_113456 0 0 10 BUD13 POSTAR2 ENCODE chr21:45746597-45746638
64251 chr5 52779399 52779399 1 + C T SKCM 52779398 + 52779378 52779418 41 ATGAACAAGAAGAACAAACCCCGCTGCGTCTGCGCCCCGGA ATGAACAAGAAGAACAAACCCTGCTGCGTCTGCGCCCCGGA < 41bp 0.526074337601264 0.760143380619715 0.15455887 0.19506156 prediction 0.468138086036901 Functional Gain - FST ENSG00000134363 CDS Human protein_coding chr5:52779398 chr5:52779399 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_113457 0 0 1 SND1 POSTAR2 ENCODE chr5:52779394-52779479
64251 chr6 44116545 44116545 1 + C T UCEC 44116544 + 44116524 44116564 41 GCCAGGGAGCACCTCTCCATCCGAGGCTTCATCTGGTGGCT GCCAGGGAGCACCTCTCCATCTGAGGCTTCATCTGGTGGCT < 41bp 0.530610698304418 0.764672063397952 0.96330583 0.92978704 prediction 0.468122730187067 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116544 chr6:44116545 stopgain 1.000 1 22 hm5C_associated_SNPs_113460 0 0 5 IGF2BP1 POSTAR2 ENCODE chr6:44116528-44116545
64251 chr2 48573477 48573477 1 + C G LUAD 48573473 + 48573453 48573493 41 CCTGAAGCTGTTGATGCTGCCAGGCCGAAGGCCACTCTAGT CCTGAAGCTGTTGATGCTGCCAGGGCGAAGGCCACTCTAGT < 41bp 0.46619606887983 0.734057606149743 0.8550998 0.901641 prediction 0.468115212299486 Functional Gain - FOXN2 ENSG00000170802 CDS Human protein_coding chr2:48573473 chr2:48573477 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_113464 0 0 7 RBM15 POSTAR2 GSE78030,GSM2064710 chr2:48573460-48573480
64251 chr21 35514738 35514738 1 + C A THCA 35514737 + 35514717 35514757 41 GGTGGATTTTTATGCACCCACCGCAGCTGTTGAAAGCATGG GGTGGATTTTTATGCACCCACAGCAGCTGTTGAAAGCATGG < 41bp 0.538438798258831 0.772482425095299 0.03920287 0.28282145 prediction 0.468087253672934 Functional Gain - MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35514737 chr21:35514738 synonymous SNV . 0 22 hm5C_associated_SNPs_113467 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr21:35514717-35514738
64251 chr16 66997138 66997138 1 + C A COAD 66997134 + 66997114 66997154 41 ACCCTGGGTCGTGTGCGAGGCCGGCAGGTGGGCGTGAAGGG ACCCTGGGTCGTGTGCGAGGCCGGAAGGTGGGCGTGAAGGG < 41bp 0.322885955396308 0.734035856949208 0.31425387 0.34794563 prediction 0.468071713898416 Functional Gain - CES3 ENSG00000172828 CDS Human protein_coding chr16:66997134 chr16:66997138 nonsynonymous SNV 0.521 0 25 hm5C_associated_SNPs_113471 0 0 2 EFTUD2 POSTAR2 ENCODE chr16:66997079-66997146
64251 chr1 26603096 26603096 1 + C T LUAD 26603095 + 26603075 26603115 41 AACACCTGCGCCAGGCCCAACCAGGGTCTCCACCTTCACCA AACACCTGCGCCAGGCCCAACTAGGGTCTCCACCTTCACCA < 41bp 0.476971425033999 0.734026677040511 0.895038 0.29793113 prediction 0.468053354081021 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26603095 chr1:26603096 nonsynonymous SNV 0.953 0 22 hm5C_associated_SNPs_113474 0 0 4 GRWD1 POSTAR2 ENCODE chr1:26603039-26603107
64251 chr16 8839954 8839954 1 + A G rs1731017 8839951 + 8839931 8839971 41 GGAAGTCCCAGGGCCTAGATCTCAGGTGAGTTGAGCACACC GGAAGTCCCAGGGCCTAGATCTCGGGTGAGTTGAGCACACC < 41bp 0.529037720866357 0.76305821390071 0.36920252 0.87954205 prediction 0.468040986068706 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8839951 chr16:8839954 nonsynonymous SNV 0.759 0 24 hm5C_associated_SNPs_113477 1 0 4 BUD13 POSTAR2 ENCODE chr16:8839909-8839968
64251 chr12 7289700 7289700 1 + C G SKCM 7289699 + 7289679 7289719 41 ACCATCGTATGTAACACTGTCCAGAATGGTGAGCCTCCCCT ACCATCGTATGTAACACTGTCGAGAATGGTGAGCCTCCCCT < 41bp 0.420611157259799 0.734017017622814 0.13240439 0.56256783 prediction 0.468034035245628 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7289699 chr12:7289700 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_113478 0 0 1 BUD13 POSTAR2 ENCODE chr12:7289692-7289704
64251 chr14 103996429 103996429 1 + C T THYM 103996428 + 103996408 103996448 41 GCGTGGGGCACAGACCCAGACCCGGCATGGTGTCCTGCGGC GCGTGGGGCACAGACCCAGACTCGGCATGGTGTCCTGCGGC < 41bp 0.537026404744111 0.771034249117214 0.15945825 0.115624964 prediction 0.468015688746207 Functional Gain - TRMT61A ENSG00000166166 CDS Human protein_coding chr14:103996428 chr14:103996429 synonymous SNV . 0 22 hm5C_associated_SNPs_113480 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr14:103996408-103996435
64251 chr15 85188990 85188990 1 - G A rs373323041 85188991 - 85188971 85189011 41 GCCTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGACAC GCCTTCTGCTGTGCTTCAGGCTGGCTGGGGCTTGTTGACAC < 41bp 0.514608731668434 0.74861078001332 0.14444515 0.16760325 prediction 0.46800409668977 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188991 chr15:85188990 nonsynonymous SNV 0.410 2 22 hm5C_associated_SNPs_113483 0 0 4 EFTUD2 POSTAR2 ENCODE chr15:85188978-85189016
64251 chrX 48382388 48382388 1 + C A UCEC 48382387 + 48382367 48382407 41 GCAGTGTGTGGGTTCATTCACCTGGTGATCGAGGGCTGGTT GCAGTGTGTGGGTTCATTCACATGGTGATCGAGGGCTGGTT < 41bp 0.465177643843633 0.734001397955945 0.3309723 0.46058118 prediction 0.46800279591189 Functional Gain - EBP ENSG00000147155 CDS Human protein_coding chrX:48382387 chrX:48382388 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_113484 0 0 43 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:48382332-48382445
64251 chr11 114272469 114272469 1 + C T BLCA 114272468 + 114272448 114272488 41 CAAAAGATAAGGATGGTAAACCAAAGCAGTTTGCGTTTGTG CAAAAGATAAGGATGGTAAACTAAAGCAGTTTGCGTTTGTG < 41bp 0.495386798037797 0.733999464870854 0.16727147 0.20606044 prediction 0.467998929741708 Functional Gain - RBM7 ENSG00000076053;ENSG00000255663 CDS Human other chr11:114272468 chr11:114272469 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_113485 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr11:114272468-114272469
64251 chr2 97462842 97462842 1 + T C COAD 97462840 + 97462820 97462860 41 GGCCTGGTCACCCTGGAGGACGTGATCGAGGAGATCATCAA GGCCTGGTCACCCTGGAGGACGCGATCGAGGAGATCATCAA < 41bp 0.605013350439432 0.838988048800294 0.17688328 0.32761705 prediction 0.467949396721724 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97462840 chr2:97462842 nonsynonymous SNV 0.991 5 23 hm5C_associated_SNPs_113492 0 0 1 PPIG POSTAR2 ENCODE chr2:97462794-97462896
64251 chr19 11097628 11097628 1 + C T SKCM 11097627 + 11097607 11097647 41 CCAGGACCCTCGGGCGTGCCCCCCGGGATGCCAGGCCAGCC CCAGGACCCTCGGGCGTGCCCTCCGGGATGCCAGGCCAGCC < 41bp 0.543712869889659 0.777686688093793 0.39721042 0.6652622 prediction 0.467947636408268 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11097627 chr19:11097628 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_113493 0 0 5 FMR1 POSTAR2 ENCODE chr19:11097592-11097672
64251 chr11 61505635 61505635 1 + C T UCEC 61505634 + 61505614 61505654 41 CTCTCTCAGCTGGAAGGCTTCCGCAGACAGCTCCTGGATGT CTCTCTCAGCTGGAAGGCTTCTGCAGACAGCTCCTGGATGT < 41bp 0.579465851495806 0.813424395458712 0.55527323 0.56156856 prediction 0.467917087925813 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61505634 chr11:61505635 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113496 0 0 1 PPIG POSTAR2 ENCODE chr11:61505606-61505688
64251 chr2 173429292 173429292 1 + C A THCA 173429291 + 173429271 173429311 41 GATGTCATTCCCACAATGGCCCAGGGTGTGATTGAATACAA GATGTCATTCCCACAATGGCCAAGGGTGTGATTGAATACAA < 41bp 0.554308580772608 0.788259407050915 0.11994371 0.48723546 prediction 0.467901652556614 Functional Gain - PDK1 ENSG00000152256 CDS Human protein_coding chr2:173429291 chr2:173429292 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_113498 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:173429256-173429294
64251 chr19 17322800 17322800 1 + T C rs117297085 17322798 + 17322778 17322818 41 CGACGAAGGCCGTCGTCCTTCGTAACGGTCAGAGTGAAGAC CGACGAAGGCCGTCGTCCTTCGCAACGGTCAGAGTGAAGAC < 41bp 0.557652612637633 0.791602643579501 0.17141402 0.24302366 prediction 0.467900061883737 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322798 chr19:17322800 nonsynonymous SNV 0.924 1 23 hm5C_associated_SNPs_113499 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:17322799-17322800
64251 chr17 26370294 26370294 1 + C T LUSC 26370293 + 26370273 26370313 41 ATCATCAGCACTCGCATCATCCACAGCAGCAGCTGGATATT ATCATCAGCACTCGCATCATCTACAGCAGCAGCTGGATATT < 41bp 0.482160818455837 0.733933186349918 0.11329204 0.8861108 prediction 0.467866372699837 Functional Gain - NLK ENSG00000087095 CDS Human protein_coding chr17:26370293 chr17:26370294 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_113504 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr17:26370283-26370304
64251 chr4 184626154 184626154 1 + C A BLCA 184626153 + 184626133 184626173 41 ACCTCAGCAATGGAGAATATCCCCATCATCACAACTGTCAT ACCTCAGCAATGGAGAATATCACCATCATCACAACTGTCAT < 41bp 0.548105861846696 0.782036606664963 0.09838733 0.09358543 prediction 0.467861489636535 Functional Gain - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184626153 chr4:184626154 nonsynonymous SNV 0.047 1 22 hm5C_associated_SNPs_113505 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:184626147-184626168
64251 chr20 2635458 2635458 1 + A G LIHC 2635455 + 2635435 2635475 41 CGATCTGTCAGCTTGTAAAGCACAGCTGGGGCTGGGACACA CGATCTGTCAGCTTGTAAAGCACGGCTGGGGCTGGGACACA < 41bp 0.520559884667859 0.75447333081162 0.13733506 0.2964983 prediction 0.467826892287521 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635455 chr20:2635458 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_113511 0 0 22 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635395-2635523
64251 chr3 52522557 52522557 1 + C T SKCM 52522556 + 52522536 52522576 41 ACTGTGGTCATCGCCAAGACCCCCGGGACGGGAGGCAGCCC ACTGTGGTCATCGCCAAGACCTCCGGGACGGGAGGCAGCCC < 41bp 0.539933879496687 0.773841607602866 0.6521668 0.79290515 prediction 0.467815456212358 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52522556 chr3:52522557 nonsynonymous SNV 0.454 0 22 hm5C_associated_SNPs_113513 0 0 5 BUD13 POSTAR2 ENCODE chr3:52522552-52522619
64251 chr3 43732440 43732440 1 + T A rs375436268 43732436 + 43732416 43732456 41 GCCCGGGGCGGCCCAGTCGGCCTGTCAGCCGGCTTCGAGAT GCCCGGGGCGGCCCAGTCGGCCTGACAGCCGGCTTCGAGAT < 41bp 0.550898370920927 0.784805323772846 0.095210254 0.08026147 prediction 0.467813905703839 Functional Gain - ABHD5 ENSG00000011198 UTR5 Human protein_coding chr3:43732436 chr3:43732440 . . 0 25 hm5C_associated_SNPs_113515 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:43732439-43732440
64251 chr2 182360122 182360122 1 + C A CESC 182360118 + 182360098 182360138 41 ATGTAGCAGTTGGTGCTTTTCGGTCTGATTCTGCTGTCTTG ATGTAGCAGTTGGTGCTTTTCGGTATGATTCTGCTGTCTTG < 41bp 0.330730098879194 0.733903566175738 0.45219654 0.44674778 prediction 0.467807132351476 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182360118 chr2:182360122 nonsynonymous SNV 0.897 4 25 hm5C_associated_SNPs_113516 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:182360110-182360141
64251 chr22 50632045 50632045 1 + C A rs6010154 50632044 + 50632024 50632064 41 TGCCGTCAGAGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCT TGCCGTCAGAGGCTTCAGAGCAGGTGCCCAGGGTGCTTTCT < 41bp 0.463144923460187 0.733901989482274 0.5159724 0.8605863 prediction 0.467803978964548 Functional Gain - TRABD ENSG00000170638 CDS Human protein_coding chr22:50632044 chr22:50632045 nonsynonymous SNV 0.027 0 22 hm5C_associated_SNPs_113520 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50632030-50632082
64251 chr5 138260294 138260294 1 + C T UCEC 138260293 + 138260273 138260313 41 ACAGCTGGTGCAATTCGAGGCCGGGCAGCCCGGGTCATTCA ACAGCTGGTGCAATTCGAGGCTGGGCAGCCCGGGTCATTCA < 41bp 0.528878704702324 0.762767972432149 0.7744796 0.77985454 prediction 0.46777853545965 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138260293 chr5:138260294 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_113523 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:138260291-138260318
64251 chr12 31253967 31253967 1 + T C COAD 31253965 + 31253945 31253985 41 CCCTGGCTCTTACCAGGTCACGTGATCCCTCCAGACAACAT CCCTGGCTCTTACCAGGTCACGCGATCCCTCCAGACAACAT < 41bp 0.547357570516779 0.781236129584152 0.038269818 0.06362948 prediction 0.467757118134746 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31253965 chr12:31253967 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_113526 0 0 4 BUD13 POSTAR2 ENCODE chr12:31253949-31254049
64251 chr9 117033022 117033022 1 + T C rs4143245 117033020 + 117033000 117033040 41 TTTTCCAGGGAGAGCCAGGCCTTGAGGGTGACAGTGGCCCC TTTTCCAGGGAGAGCCAGGCCTCGAGGGTGACAGTGGCCCC < 41bp 0.446364172165751 0.733871793122004 0.3892237 0.4877777 prediction 0.467743586244009 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:117033020 chr9:117033022 synonymous SNV . 0 23 hm5C_associated_SNPs_113529 0 0 8 BUD13 POSTAR2 ENCODE chr9:117033010-117033048
64251 chr11 1688702 1688702 1 + A G rs114676787 1688699 + 1688679 1688719 41 CGGCTCTTGGCCATTTTGCCCGCAGGGCCCTACCTTGGGTC CGGCTCTTGGCCATTTTGCCCGCGGGGCCCTACCTTGGGTC < 41bp 0.516626896196025 0.750498639259616 0.47081184 0.940772 prediction 0.467743486127182 Functional Gain - FAM99A ENSG00000205866;ENSG00000256528 ncRNA_exonic Human other chr11:1688699 chr11:1688702 . . 0 24 hm5C_associated_SNPs_113530 0 0 2 XPO5 POSTAR2 ENCODE chr11:1688639-1688744
64251 chr19 16989156 16989156 1 + C T UCEC 16989155 + 16989135 16989175 41 GATGGTGTTCATCGTGAACTCCGAGGACTACATGTACCGTC GATGGTGTTCATCGTGAACTCTGAGGACTACATGTACCGTC < 41bp 0.521983459077791 0.755852968177897 0.7385545 0.21120104 prediction 0.467739018200212 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16989155 chr19:16989156 synonymous SNV . 0 22 hm5C_associated_SNPs_113532 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:16989140-16989160
64251 chr7 44805845 44805845 1 + C T SKCM 44805844 + 44805824 44805864 41 CCCAACCCTTGCTGAGTTCACCCCGGGACCACCCCCCATCT CCCAACCCTTGCTGAGTTCACTCCGGGACCACCCCCCATCT < 41bp 0.460065244452804 0.733867220672541 0.24920624 0.30428973 prediction 0.467734441345083 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44805844 chr7:44805845 synonymous SNV . 0 22 hm5C_associated_SNPs_113535 0 0 5 DDX59 POSTAR2 ENCODE chr7:44805781-44805912
64251 chr6 26458895 26458895 1 + C A ESCA 26458894 + 26458874 26458914 41 GCTGCTGCCCTGCACTTCTCCCGGCCAGCCTCCCTCCTCCT GCTGCTGCCCTGCACTTCTCCAGGCCAGCCTCCCTCCTCCT < 41bp 0.476828389124478 0.733864223569892 0.2999943 0.8653066 prediction 0.467728447139784 Functional Gain - BTN2A1 ENSG00000112763 CDS Human protein_coding chr6:26458894 chr6:26458895 synonymous SNV . 0 22 hm5C_associated_SNPs_113537 0 0 1 GRWD1 POSTAR2 ENCODE chr6:26458836-26458912
64251 chr5 424017 424017 1 + C T PRAD 424016 + 423996 424036 41 GTGGGGCACAGGCACGCCCACCGAGTACTCGGCCTTCCTGA GTGGGGCACAGGCACGCCCACTGAGTACTCGGCCTTCCTGA < 41bp 0.528526063581765 0.762386843364799 0.51758116 0.09100515 prediction 0.467721559566067 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:424016 chr5:424017 synonymous SNV . 0 22 hm5C_associated_SNPs_113538 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:423979-424020
64251 chr19 52448941 52448941 1 + C A LGG 52448937 + 52448917 52448957 41 GCAAAGTAGCCATTGTGAGCCAGCCTGTTGCCAGAAGTTCA GCAAAGTAGCCATTGTGAGCCAGCATGTTGCCAGAAGTTCA < 41bp 0.339526753426936 0.733860692058035 0.0536896 0.04611349 prediction 0.46772138411607 Functional Gain - ZNF613 ENSG00000176024 CDS Human protein_coding chr19:52448937 chr19:52448941 nonsynonymous SNV 0.512 2 25 hm5C_associated_SNPs_113539 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:52448915-52448962
64251 chr11 65403915 65403915 1 + C A COAD 65403914 + 65403894 65403934 41 GGCTGGGGGCCGCGGTCCTCCCTGAGTGGCTCTGGTGATGG GGCTGGGGGCCGCGGTCCTCCATGAGTGGCTCTGGTGATGG < 41bp 0.540438355261784 0.774286835570884 0.15087023 0.35017008 prediction 0.4676969606182 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65403914 chr11:65403915 nonsynonymous SNV 0.918 0 22 hm5C_associated_SNPs_113543 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:65403780-65403916
64251 chr3 49051440 49051440 1 + C T SKCM 49051439 + 49051419 49051459 41 GTTACTCCGGACCCCAGCACCCCAAGCCGCCTCGCCTGCCA GTTACTCCGGACCCCAGCACCTCAAGCCGCCTCGCCTGCCA < 41bp 0.562262298623405 0.796108846116516 0.20604682 0.659225 prediction 0.467693094986223 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051439 chr3:49051440 nonsynonymous SNV 0.981 0 22 hm5C_associated_SNPs_113545 0 0 25 NUDT21 POSTAR2 GSE37401,GSM917662 chr3:49051380-49051440
64251 chr20 44444315 44444315 1 + C T SKCM 44444314 + 44444294 44444334 41 GGTAACATATGCCTGGACATCCTGAAGGAAAAGTGGTCTGC GGTAACATATGCCTGGACATCTTGAAGGAAAAGTGGTCTGC < 41bp 0.57374737039948 0.807586100299753 0.23675263 0.31224883 prediction 0.467677459800546 Functional Gain - UBE2C ENSG00000175063 CDS Human protein_coding chr20:44444314 chr20:44444315 synonymous SNV . 0 22 hm5C_associated_SNPs_113547 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:44444183-44444347
64251 chr1 44134853 44134853 1 + C T SKCM 44134852 + 44134832 44134872 41 GTGAGTCAGAGTGAGCTCTTCCCCAAGGAGGATCTGAGTTC GTGAGTCAGAGTGAGCTCTTCTCCAAGGAGGATCTGAGTTC < 41bp 0.589455845776877 0.823294110407953 0.19246432 0.95179677 prediction 0.467676529262151 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44134852 chr1:44134853 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_113548 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:44134824-44134884
64251 chr14 74327274 74327274 1 + C T HNSC 74327273 + 74327253 74327293 41 AATCCAGTGGCAGAGAATTTCCGAATGGAAGAAGTCTATTT AATCCAGTGGCAGAGAATTTCTGAATGGAAGAAGTCTATTT < 41bp 0.488690777194567 0.733823091182704 0.49700823 0.40812343 prediction 0.467646182365409 Functional Gain - PTGR2 ENSG00000140043;ENSG00000258653 CDS Human other chr14:74327273 chr14:74327274 stopgain 0.991 1 22 hm5C_associated_SNPs_113554 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:74327257-74327288
64251 chr1 173743452 173743452 1 + C T UCEC 173743451 + 173743431 173743471 41 TCCCTCACTGCAGGTATGATCCGAAGGAGAACAAGTGGACT TCCCTCACTGCAGGTATGATCTGAAGGAGAACAAGTGGACT < 41bp 0.487336677803834 0.733822855375473 0.42397425 0.28032392 prediction 0.467645710750945 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173743451 chr1:173743452 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_113555 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:173743448-173743473
64251 chr16 846798 846798 1 + C A rs742317 846794 + 846774 846814 41 CCAGACGAAGCAGCTCATCGCCCGCGAGATCGAGGTGGAGA CCAGACGAAGCAGCTCATCGCCCGAGAGATCGAGGTGGAGA < 41bp 0.324242245032108 0.733812587420734 0.13464388 0.416257 prediction 0.467625174841467 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:846794 chr16:846798 synonymous SNV . 0 25 hm5C_associated_SNPs_113560 0 0 1 PPIG POSTAR2 ENCODE chr16:846794-846855
64251 chr17 42428482 42428482 1 + C T LIHC 42428481 + 42428461 42428501 41 GATCCAGAGTAAGTGCCTCTCCAAGGAGAACGCTACCACGG GATCCAGAGTAAGTGCCTCTCTAAGGAGAACGCTACCACGG < 41bp 0.542138419662938 0.775949782066363 0.466605 0.23756582 prediction 0.467622724806852 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42428481 chr17:42428482 synonymous SNV . 0 22 hm5C_associated_SNPs_113561 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:42428441-42428492
64251 chr9 72929701 72929701 1 + C T LUSC 72929700 + 72929680 72929720 41 GAGTAAATGCTGTTATTGCTCCCAAGAGTTCATATGCAGAC GAGTAAATGCTGTTATTGCTCTCAAGAGTTCATATGCAGAC < 41bp 0.475961135403138 0.733803894422055 0.036691755 0.0109806955 prediction 0.467607788844111 Functional Gain - SMC5 ENSG00000198887 CDS Human protein_coding chr9:72929700 chr9:72929701 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_113564 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:72929677-72929707
64251 chr15 91500068 91500068 1 + T A BLCA 91500064 + 91500044 91500084 41 GCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGAC GCCAGGTGCACAGCCCCAGTCCGCAGCGGGCGGGCGTCGAC < 41bp 0.644558103167127 0.878360608083753 0.22485727 0.22782901 prediction 0.467605009833252 Functional Gain - RCCD1 ENSG00000166965 CDS Human protein_coding chr15:91500064 chr15:91500068 nonsynonymous SNV 0.020 4 25 hm5C_associated_SNPs_113566 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr15:91500068-91500069
64251 chr12 121655066 121655066 1 + T A UCEC 121655062 + 121655042 121655082 41 ATTCCGGATCTGGGATGTGGCGGATTATGTGATACCAGCTC ATTCCGGATCTGGGATGTGGCGGAATATGTGATACCAGCTC < 41bp 0.630713527209251 0.864513537759596 0.41194093 0.63595206 prediction 0.46760002110069 Functional Gain - P2RX4 ENSG00000135124 CDS Human protein_coding chr12:121655062 chr12:121655066 nonsynonymous SNV 0.984 1 25 hm5C_associated_SNPs_113567 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:121655059-121655086
64251 chr16 767909 767909 1 + T G rs531600041 767906 + 767886 767926 41 GCTCCGGCTCTGAGCCAGGCCTGTGAGGGAAGGGGCTGCAG GCTCCGGCTCTGAGCCAGGCCTGGGAGGGAAGGGGCTGCAG < 41bp 0.671760045020356 0.905554509639206 0.41156766 0.66376144 prediction 0.467588929237698 Functional Gain - METRN ENSG00000103260 UTR3 Human protein_coding chr16:767906 chr16:767909 . . 0 24 hm5C_associated_SNPs_113569 0 0 1 FKBP4 POSTAR2 ENCODE chr16:767865-767980
64251 chr5 170863205 170863205 1 + C T STAD 170863204 + 170863184 170863224 41 CGGCTGTACCAGCTCTACAGCCGGACCAGTGGGAAACACAT CGGCTGTACCAGCTCTACAGCTGGACCAGTGGGAAACACAT < 41bp 0.495490636758604 0.733790504746194 0.6396464 0.31809866 prediction 0.467581009492388 Functional Gain - FGF18 ENSG00000156427 CDS Human protein_coding chr5:170863204 chr5:170863205 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_113570 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:170863196-170863215
64251 chr1 116563415 116563415 1 + C G UCEC 116563411 + 116563391 116563431 41 ATATGAGTTCTTTGCAGTAACTCGCTTCCTGGTGGGCATGA ATATGAGTTCTTTGCAGTAACTCGGTTCCTGGTGGGCATGA < 41bp 0.601080849343339 0.834858408091551 0.027900219 0.1348306 prediction 0.467555117496423 Functional Gain - SLC22A15 ENSG00000163393 CDS Human protein_coding chr1:116563411 chr1:116563415 synonymous SNV . 0 25 hm5C_associated_SNPs_113573 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:116563390-116563442
64251 chr5 137756576 137756576 1 + C T UCEC 137756575 + 137756555 137756595 41 CCTTCGAGACCTCCTTCACTCCGGGCCGGGAAAACTTCCTC CCTTCGAGACCTCCTTCACTCTGGGCCGGGAAAACTTCCTC < 41bp 0.542347235780316 0.776123687622303 0.40191296 0.21845645 prediction 0.467552903683974 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137756575 chr5:137756576 synonymous SNV . 0 22 hm5C_associated_SNPs_113574 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:137756549-137756581
64251 chr6 116580017 116580017 1 + T C STAD 116580015 + 116579995 116580035 41 TGCTTGACGATGCACACAGTCATGAGCTTCTTGCCGTTGTT TGCTTGACGATGCACACAGTCACGAGCTTCTTGCCGTTGTT < 41bp 0.463775685837949 0.733773742318926 0.31140804 0.12860543 prediction 0.467547484637852 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116580015 chr6:116580017 synonymous SNV . 0 23 hm5C_associated_SNPs_113575 0 0 1 RBM15 POSTAR2 ENCODE chr6:116579996-116580074
64251 chr20 49197898 49197898 1 + C T UCEC 49197897 + 49197877 49197917 41 CAAAGGGGAGCCGTCACTGCCCGAGAAGGACGAGGACCATG CAAAGGGGAGCCGTCACTGCCTGAGAAGGACGAGGACCATG < 41bp 0.516606595702142 0.750371633315261 0.19877067 0.16109258 prediction 0.467530075226237 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197897 chr20:49197898 synonymous SNV . 0 22 hm5C_associated_SNPs_113578 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:49197879-49197927
64251 chr10 91177851 91177851 1 + C T SKCM 91177850 + 91177830 91177870 41 TGCTACAGGGCACAAATGATCCAAATCAAGAAGGCCACACA TGCTACAGGGCACAAATGATCTAAATCAAGAAGGCCACACA < 41bp 0.516049179326675 0.749809595061578 0.2721572 0.18464488 prediction 0.467520831469806 Functional Gain - IFIT5 ENSG00000152778 CDS Human protein_coding chr10:91177850 chr10:91177851 stopgain 0.999 0 22 hm5C_associated_SNPs_113579 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:91177832-91177860
64251 chr3 10291178 10291178 1 + C T SKCM 10291177 + 10291157 10291197 41 TGGTGTGGGCGGGGCCGCCTCCAAAGGCTGCCTGATTCGGA TGGTGTGGGCGGGGCCGCCTCTAAAGGCTGCCTGATTCGGA < 41bp 0.533212772083704 0.766953482737365 0.414303 0.61952585 prediction 0.46748142130732 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10291177 chr3:10291178 synonymous SNV . 0 22 hm5C_associated_SNPs_113584 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:10291178-10291199
64251 chr2 170607585 170607585 1 + C G rs538169308 170607584 + 170607564 170607604 41 CACTGCAAATCACAGACAGGCCTAGATACAGATCCCCTCAC CACTGCAAATCACAGACAGGCGTAGATACAGATCCCCTCAC < 41bp 0.453050546055892 0.733730551894538 0.05632612 0.11028868 prediction 0.467461103789075 Functional Gain - KLHL23;PHOSPHO2-KLHL23 ENSG00000213160 UTR3 Human protein_coding chr2:170607584 chr2:170607585 . . 0 22 hm5C_associated_SNPs_113588 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:170607576-170607638
64251 chr19 42796253 42796253 1 + C G TGCT 42796252 + 42796232 42796272 41 CCACAGATCATCCAGCTGACCCCGGTGCCTGTGAGCACACC CCACAGATCATCCAGCTGACCGCGGTGCCTGTGAGCACACC < 41bp 0.411105480775012 0.733729663131547 0.048332155 0.1138871 prediction 0.467459326263093 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42796252 chr19:42796253 nonsynonymous SNV 0.921 3 22 hm5C_associated_SNPs_113589 0 0 3 METAP2 POSTAR2 ENCODE chr19:42796237-42796278
64251 chr9 35842531 35842531 1 + C G rs143767690 35842527 + 35842507 35842547 41 GGGGCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAG GGGGCCTGGGACCACGTCCCCACCGGAGCACTGCTGGCCAG < 41bp 0.622313174515202 0.85603760044848 0.24824408 0.36397177 prediction 0.467448851866556 Functional Gain - TMEM8B ENSG00000137103 CDS Human protein_coding chr9:35842527 chr9:35842531 synonymous SNV . 0 25 hm5C_associated_SNPs_113591 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:35842516-35842555
64251 chr12 123344323 123344323 1 + T C CESC 123344321 + 123344301 123344341 41 CTCTGTTCTTGGGTGCAGGACATGATGAACCAGGCACGCCA CTCTGTTCTTGGGTGCAGGACACGATGAACCAGGCACGCCA < 41bp 0.588110391798432 0.821826414969395 0.08761117 0.12962562 prediction 0.467432046341926 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123344321 chr12:123344323 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_113594 0 0 1 ZNF622 POSTAR2 ENCODE chr12:123344318-123344373
64251 chrX 74520748 74520748 1 + T C UCEC 74520746 + 74520726 74520766 41 CTGTAAAGGTTCTTATAGAACATGGAGTTCAACCCAGTGTT CTGTAAAGGTTCTTATAGAACACGGAGTTCAACCCAGTGTT < 41bp 0.577487326196666 0.811194678222694 0.3082065 0.33238184 prediction 0.467414704052057 Functional Gain - UPRT ENSG00000094841 CDS Human protein_coding chrX:74520746 chrX:74520748 synonymous SNV . 0 23 hm5C_associated_SNPs_113596 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:74520741-74520777
64251 chr16 88874591 88874591 1 + C T rs144721725 88874590 + 88874570 88874610 41 TGGCTCAGCCTCCACCGCATCCGCACCGACACCTACGTCAA TGGCTCAGCCTCCACCGCATCTGCACCGACACCTACGTCAA < 41bp 0.549572296643726 0.783277027918759 0.05671391 0.13599807 prediction 0.467409462550065 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88874590 chr16:88874591 nonsynonymous SNV 0.010 4 22 hm5C_associated_SNPs_113597 1 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:88874555-88874592
64251 chr4 154217121 154217121 1 + C T COAD 154217120 + 154217100 154217140 41 GCAGAAAGCTGTGAAAAGACCCGCAAGCATGTACAGCACTG GCAGAAAGCTGTGAAAAGACCTGCAAGCATGTACAGCACTG < 41bp 0.483475702434696 0.733704393898665 0.11133769 0.3956856 prediction 0.467408787797331 Functional Gain - TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154217120 chr4:154217121 synonymous SNV . 0 22 hm5C_associated_SNPs_113598 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:154217114-154217135
64251 chr17 37815729 37815729 1 + C T COAD 37815728 + 37815708 37815748 41 GTCCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCAC GTCCAGGAGCGGGAGTACATCTGCCAGGGGAAGGAGGCCAC < 41bp 0.550854018227112 0.78451776003565 0.32076293 0.14466387 prediction 0.467327483617076 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815728 chr17:37815729 nonsynonymous SNV 0.980 4 22 hm5C_associated_SNPs_113610 0 0 9 IGF2BP3 POSTAR2 GSE79147,GSM2086978 chr17:37815720-37815740
64251 chr3 195944788 195944788 1 + A G LIHC 195944785 + 195944765 195944805 41 GCCTGCTTCTCTCAGCCTCCCACAGCAGCCCAACTCCTGAG GCCTGCTTCTCTCAGCCTCCCACGGCAGCCCAACTCCTGAG < 41bp 0.550469078532579 0.784128019925583 0.063848615 0.098474115 prediction 0.467317882786008 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195944785 chr3:195944788 synonymous SNV . 0 24 hm5C_associated_SNPs_113611 0 0 1 GRWD1 POSTAR2 ENCODE chr3:195944751-195944808
64251 chrX 65408293 65408293 1 + C A LUSC 65408289 + 65408269 65408309 41 GTGGTAGATGAGAACCTCAGCTGGCATCTCAATGAGAACAT GTGGTAGATGAGAACCTCAGCTGGAATCTCAATGAGAACAT < 41bp 0.312567155564915 0.733655699518071 0.25411254 0.21776327 prediction 0.467311399036141 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65408289 chrX:65408293 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_113612 0 0 2 DDX24 POSTAR2 ENCODE chrX:65408261-65408322
64251 chr6 26273489 26273489 1 + C A UCEC 26273488 + 26273468 26273508 41 ACCATCACTTCCAGGGAGATCCAAACGGCTGTGCGCCTGCT ACCATCACTTCCAGGGAGATCAAAACGGCTGTGCGCCTGCT < 41bp 0.537907083344018 0.77156237484281 0.30017453 0.5245421 prediction 0.467310582997583 Functional Gain - HIST1H2BI ENSG00000168242 CDS Human other chr6:26273488 chr6:26273489 nonsynonymous SNV 0.887 1 22 hm5C_associated_SNPs_113613 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr6:26273473-26273493
64251 chr5 52096361 52096361 1 + C T UCEC 52096360 + 52096340 52096380 41 AGCCTGCGCGCCTCCACCATCCGCAAGGTACAGACAGAGTC AGCCTGCGCGCCTCCACCATCTGCAAGGTACAGACAGAGTC < 41bp 0.572156417026033 0.805808800124115 0.25104487 0.28714627 prediction 0.467304766196164 Functional Gain - PELO ENSG00000152684 CDS Human protein_coding chr5:52096360 chr5:52096361 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_113615 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:52096340-52096380
64251 chr17 40997755 40997755 1 + C T COAD 40997754 + 40997734 40997774 41 CTATCTATGGTGCCGATTCACCCAAGACGATGCTGACTCGC CTATCTATGGTGCCGATTCACTCAAGACGATGCTGACTCGC < 41bp 0.562255815062068 0.795903830131594 0.015378475 0.028645456 prediction 0.467296030139052 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997754 chr17:40997755 nonsynonymous SNV 0.003 3 22 hm5C_associated_SNPs_113617 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:40997646-40997804
64251 chr2 131104008 131104008 1 + C T COAD 131104007 + 131103987 131104027 41 CTGGCACCCTTACACCAATACCGCACGCAAGAGAGTCTTCC CTGGCACCCTTACACCAATACTGCACGCAAGAGAGTCTTCC < 41bp 0.478555460297017 0.733641733068982 0.028152823 0.043675542 prediction 0.467283466137963 Functional Gain - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131104007 chr2:131104008 synonymous SNV . 0 22 hm5C_associated_SNPs_113621 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:131103981-131104009
64251 chr20 1918951 1918951 1 + C G rs6045550 1918950 + 1918930 1918970 41 ACCCATCTCTCCCTTCTAGACCTGAGCTTGCCCCTCCAGCT ACCCATCTCTCCCTTCTAGACGTGAGCTTGCCCCTCCAGCT < 41bp 0.420720803239228 0.733636676453823 0.04744363 0.055851698 prediction 0.467273352907647 Functional Gain - SIRPA ENSG00000198053 UTR3 Human protein_coding chr20:1918950 chr20:1918951 . . 0 22 hm5C_associated_SNPs_113622 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr20:1918919-1918953
64251 chr1 43166659 43166659 1 + C T LUSC 43166658 + 43166638 43166678 41 AGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAGGGCGGGG AGCTGAGAATTCGTCCGCTCCTGAGGCTGAGCAGGGCGGGG < 41bp 0.518648331954226 0.752275551503449 0.8900871 0.52756304 prediction 0.467254439098446 Functional Gain - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43166658 chr1:43166659 synonymous SNV . 0 22 hm5C_associated_SNPs_113624 0 0 37 UPF1 POSTAR2 GSE69586,GSM1704216 chr1:43166620-43166660
64251 chr19 49448105 49448105 1 + C T SKCM 49448104 + 49448084 49448124 41 TGAAGGAAAGTCCTGTGATTCCCCTGTCGGAAAGTGAGCTC TGAAGGAAAGTCCTGTGATTCTCCTGTCGGAAAGTGAGCTC < 41bp 0.54738355209538 0.780998516107951 0.09090376 0.13666469 prediction 0.467229928025142 Functional Gain - DHDH ENSG00000104808 CDS Human protein_coding chr19:49448104 chr19:49448105 nonsynonymous SNV 0.953 1 22 hm5C_associated_SNPs_113630 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:49448093-49448140
64251 chr8 74891077 74891077 1 + T G LGG 74891074 + 74891054 74891094 41 GGAAGGCTAATTTATACTGGCAATATGGCCCGAGCAGTGTT GGAAGGCTAATTTATACTGGCAAGATGGCCCGAGCAGTGTT < 41bp 0.353083462752434 0.73361174897164 0.34024352 0.33976442 prediction 0.46722349794328 Functional Gain - TMEM70 ENSG00000175606 CDS Human protein_coding chr8:74891074 chr8:74891077 nonsynonymous SNV 0.966 2 24 hm5C_associated_SNPs_113631 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:74891059-74891085
64251 chrX 13726867 13726867 1 + T G KIRC 13726864 + 13726844 13726884 41 CTTGAAGCTTTTGAGATTAACAATGGCAGGAAAATCATCAC CTTGAAGCTTTTGAGATTAACAAGGGCAGGAAAATCATCAC < 41bp 0.551893366184243 0.785493806562884 0.2136864 0.90844476 prediction 0.467200880757281 Functional Gain - RAB9A ENSG00000123595 CDS Human protein_coding chrX:13726864 chrX:13726867 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_113634 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chrX:13726852-13726873
64251 chr7 116544378 116544378 1 + T C SKCM 116544376 + 116544356 116544396 41 TGCAGTTGAATCATGGAGAACTTCAGTAGAAACTGCTCTGA TGCAGTTGAATCATGGAGAACTCCAGTAGAAACTGCTCTGA < 41bp 0.626537080907303 0.860135727328278 0.29249364 0.92979515 prediction 0.467197292841949 Functional Gain - CAPZA2 ENSG00000198898 CDS Human protein_coding chr7:116544376 chr7:116544378 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_113635 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:116544338-116544430
64251 chr5 145838674 145838674 1 + A G COAD 145838671 + 145838651 145838691 41 GCCCAGGCCCAGGCCCAGGCCCAAGCCCAAGCCCAGGCCCA GCCCAGGCCCAGGCCCAGGCCCAGGCCCAAGCCCAGGCCCA < 41bp 0.485008869748698 0.733592923878371 0.15707618 0.2702291 prediction 0.467185847756741 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838671 chr5:145838674 synonymous SNV . 0 24 hm5C_associated_SNPs_113636 0 0 2 XPO5 POSTAR2 ENCODE chr5:145838643-145838729
64251 chr17 61685296 61685296 1 + C T CESC 61685295 + 61685275 61685315 41 TGAGCCCGACCTGGAACAGGCCGCACATCTCATTCAGGCTC TGAGCCCGACCTGGAACAGGCTGCACATCTCATTCAGGCTC < 41bp 0.538610715815944 0.772199505370199 0.11845282 0.10217565 prediction 0.467177579108511 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61685295 chr17:61685296 synonymous SNV . 0 22 hm5C_associated_SNPs_113639 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:61685283-61685330
64251 chr7 65617362 65617362 1 + C G rs143456688 65617361 + 65617341 65617381 41 ATAGAAGAGCACAGCTGGCCCCGGCGTTTCATGAAGTCAGA ATAGAAGAGCACAGCTGGCCCGGGCGTTTCATGAAGTCAGA < 41bp 0.423813534346228 0.733576376557221 0.33759546 0.6875477 prediction 0.467152753114441 Functional Gain - CRCP ENSG00000234185 ncRNA_intronic Human antisense chr7:65617361 chr7:65617362 . . 0 22 hm5C_associated_SNPs_113643 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:65617361-65617378
64251 chr19 50905493 50905493 1 + C T UCEC 50905492 + 50905472 50905512 41 GTACCACGGGCACGGCCCCTCCCCGTTCCTGCGCATCACCG GTACCACGGGCACGGCCCCTCTCCGTTCCTGCGCATCACCG < 41bp 0.547637403207541 0.781211030925824 0.10918617 0.28267428 prediction 0.467147255436565 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905492 chr19:50905493 synonymous SNV . 0 22 hm5C_associated_SNPs_113644 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:50905473-50905496
64251 chr3 5229577 5229577 1 + C A STAD 5229576 + 5229556 5229596 41 GCTCGTCTTCGGGCTGGGGCCCAGCATGGGCTTCTACCAGC GCTCGTCTTCGGGCTGGGGCCAAGCATGGGCTTCTACCAGC < 41bp 0.531657458373185 0.765226917195976 0.25895405 0.35513234 prediction 0.467138917645582 Functional Gain - EDEM1 ENSG00000134109;ENSG00000268509 CDS Human other chr3:5229576 chr3:5229577 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_113646 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr3:5229553-5229579
64251 chr5 132440047 132440047 1 + C A LUSC 132440043 + 132440023 132440063 41 GGATGGACAAGGAGACAACCCAGGCCCCCAGGCTGCTGAGC GGATGGACAAGGAGACAACCCAGGACCCCAGGCTGCTGAGC < 41bp 0.686332974466095 0.919898556754514 0.89442825 0.88387614 prediction 0.467131164576839 Functional Gain - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132440043 chr5:132440047 synonymous SNV . 0 25 hm5C_associated_SNPs_113648 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:132439988-132440069
64251 chr3 69987130 69987130 1 + C T UCEC 69987129 + 69987109 69987149 41 CTGGCGATCATGTCATGCCACCGGTGCCGGGGAGCAGCGCA CTGGCGATCATGTCATGCCACTGGTGCCGGGGAGCAGCGCA < 41bp 0.491156139691481 0.733551497925432 0.14163774 0.18582904 prediction 0.467102995850864 Functional Gain - MITF ENSG00000187098 CDS Human protein_coding chr3:69987129 chr3:69987130 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_113652 0 0 1 IGF2BP1 POSTAR2 ENCODE chr3:69986984-69987168
64251 chr11 65632486 65632486 1 + A G STAD 65632483 + 65632463 65632503 41 TGGCCTCAGTCCCTTCTTCCCTCAGGGCCACACCCTACGCA TGGCCTCAGTCCCTTCTTCCCTCGGGGCCACACCCTACGCA < 41bp 0.528498993364147 0.762047959428803 0.17026299 0.46599573 prediction 0.467097932129313 Functional Gain - MUS81 ENSG00000172732 splicing Human protein_coding chr11:65632483 chr11:65632486 . 0.996 0 24 hm5C_associated_SNPs_113657 0 0 16 BUD13 POSTAR2 ENCODE chr11:65632437-65632529
64251 chr19 50544992 50544992 1 + C T SKCM 50544991 + 50544971 50545011 41 TTTTCTCTCCCTGCAGACCCCCCAAGACCCAACCTGACCTC TTTTCTCTCCCTGCAGACCCCTCAAGACCCAACCTGACCTC < 41bp 0.558982003225205 0.792527393465799 0.059038818 0.055627972 prediction 0.467090780481187 Functional Gain - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50544991 chr19:50544992 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_113658 0 0 3 BUD13 POSTAR2 ENCODE chr19:50544969-50545028
64251 chr10 64565041 64565041 1 + A G LUAD 64565038 + 64565018 64565058 41 AACATCGCCCCGCGCAAGGCCACACTGCAGCCGCTGCCGCC AACATCGCCCCGCGCAAGGCCACGCTGCAGCCGCTGCCGCC < 41bp 0.531081514870691 0.764622146837578 0.0815126 0.07907489 prediction 0.467081263933774 Functional Gain - ADO ENSG00000181915 CDS Human protein_coding chr10:64565038 chr10:64565041 synonymous SNV . 0 24 hm5C_associated_SNPs_113660 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64564913-64565043
64251 chr12 27113474 27113474 1 + C T SKCM 27113473 + 27113453 27113493 41 CATGGTACATCGTAACAAGTCCGAAGGATTCTTCCTTGATG CATGGTACATCGTAACAAGTCTGAAGGATTCTTCCTTGATG < 41bp 0.520048394324432 0.75358839264675 0.037914157 0.02395925 prediction 0.467079996644638 Functional Gain - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27113473 chr12:27113474 synonymous SNV . 0 22 hm5C_associated_SNPs_113662 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:27113464-27113490
64251 chr1 38260316 38260316 1 + C G LUAD 38260315 + 38260295 38260335 41 CCCCCCAGACGACTTGGGCTCCAGCTTCTACCCGGAGCTGG CCCCCCAGACGACTTGGGCTCGAGCTTCTACCCGGAGCTGG < 41bp 0.42290767721387 0.73353634019132 0.3517545 0.8750329 prediction 0.467072680382641 Functional Gain - MANEAL ENSG00000185090 CDS Human protein_coding chr1:38260315 chr1:38260316 synonymous SNV . 0 22 hm5C_associated_SNPs_113663 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:38260305-38260328
64251 chr17 27016477 27016477 1 + C T READ 27016476 + 27016456 27016496 41 CCTGGAATACGATGAATCAGCCGAGGATGCCAATCCTGCAG CCTGGAATACGATGAATCAGCTGAGGATGCCAATCCTGCAG < 41bp 0.492699314502037 0.733536230691228 0.876281 0.802235 prediction 0.467072461382457 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27016476 chr17:27016477 synonymous SNV . 0 22 hm5C_associated_SNPs_113664 0 0 10 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:27016458-27016479
64251 chr14 93277967 93277967 1 + C T UCEC 93277966 + 93277946 93277986 41 AGCAGAAGCAATTACACTGGCCGAAAGAAAATACTCAGATG AGCAGAAGCAATTACACTGGCTGAAAGAAAATACTCAGATG < 41bp 0.483530605016735 0.733524622943333 0.23721415 0.23892915 prediction 0.467049245886665 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93277966 chr14:93277967 synonymous SNV . 0 22 hm5C_associated_SNPs_113669 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93277922-93277984
64251 chr11 57564253 57564253 1 + C T COAD 57564252 + 57564232 57564272 41 AGGCCCAGCATGGAAGGCTACCGGGCACCTAGTAGACAGGA AGGCCCAGCATGGAAGGCTACTGGGCACCTAGTAGACAGGA < 41bp 0.512297519586426 0.745820445021374 0.34234977 0.29640007 prediction 0.467045850869897 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57564252 chr11:57564253 nonsynonymous SNV 0.979 4 22 hm5C_associated_SNPs_113671 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr11:57564248-57564266
64251 chr19 4443328 4443328 1 + C G rs555368487 4443324 + 4443304 4443344 41 ATGAATTGAAGCGTCAGGACCACCCGCCTGGCCACGTGCGC ATGAATTGAAGCGTCAGGACCACCGGCCTGGCCACGTGCGC < 41bp 0.486333019852628 0.733521049016115 0.0243105 0.06895572 prediction 0.467042098032229 Functional Gain - CHAF1A ENSG00000167670 UTR3 Human protein_coding chr19:4443324 chr19:4443328 . . 0 25 hm5C_associated_SNPs_113673 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:4443204-4443328
64251 chr3 43098049 43098049 1 + A G rs116610240 43098046 + 43098026 43098066 41 TAGTATGGGGTTTTCAATCTCAAAGCGTCCCTTTCTGCCTT TAGTATGGGGTTTTCAATCTCAAGGCGTCCCTTTCTGCCTT < 41bp 0.488860504185003 0.73350999843583 0.87128675 0.9389853 prediction 0.467019996871661 Functional Gain - FAM198A ENSG00000144649 UTR3 Human protein_coding chr3:43098046 chr3:43098049 . . 0 24 hm5C_associated_SNPs_113677 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:43098049-43098074
64251 chr22 38245636 38245636 1 + C G rs7292777 38245635 + 38245615 38245655 41 TCAGGCTGCTCCCACAGTTCCCGGTCCCTAGACAACCCTGG TCAGGCTGCTCCCACAGTTCCGGGTCCCTAGACAACCCTGG < 41bp 0.628619484046159 0.862107205088535 0.3716482 0.9141147 prediction 0.466975442084752 Functional Gain - EIF3L ENSG00000100129 UTR5 Human protein_coding chr22:38245635 chr22:38245636 . . 0 22 hm5C_associated_SNPs_113686 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:38245631-38245658
64251 chr4 95539223 95539223 1 + T C COAD 95539221 + 95539201 95539241 41 ACACGGAGCATGCCCGAGAGCCTGGACAGCCCAACCTCTGG ACACGGAGCATGCCCGAGAGCCCGGACAGCCCAACCTCTGG < 41bp 0.489683911732734 0.733482418263682 0.3599968 0.29030323 prediction 0.466964836527364 Functional Gain - PDLIM5 ENSG00000163110 CDS Human protein_coding chr4:95539221 chr4:95539223 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_113687 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr4:95539170-95539227
64251 chr22 39909964 39909964 1 + C T SARC 39909963 + 39909943 39909983 41 TGTGGCGGCTGAGCCTGCGTCCCGCGGAGACGGCACGCCTG TGTGGCGGCTGAGCCTGCGTCTCGCGGAGACGGCACGCCTG < 41bp 0.539509951331759 0.772985720139116 0.22592488 0.2770781 prediction 0.466951537614713 Functional Gain - MIEF1 ENSG00000100335 CDS Human protein_coding chr22:39909963 chr22:39909964 nonsynonymous SNV 0.478 1 22 hm5C_associated_SNPs_113691 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr22:39909936-39909966
64251 chr7 128480671 128480671 1 + T A COAD 128480667 + 128480647 128480687 41 TGTTCGAGTGCGAGTACTACCCGGTGGTGCCTGGGAAGTAT TGTTCGAGTGCGAGTACTACCCGGAGGTGCCTGGGAAGTAT < 41bp 0.432368934101466 0.733474804817608 0.6781175 0.89971197 prediction 0.466949609635216 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128480667 chr7:128480671 nonsynonymous SNV 0.870 1 25 hm5C_associated_SNPs_113692 0 0 9 AGGF1 POSTAR2 ENCODE chr7:128480660-128480674
64251 chr1 161132821 161132821 1 + C A rs1127525 161132817 + 161132797 161132837 41 CTTGCCAATGGTCCAGTTCCCTCTCCACCCCGCCGAGGAGG CTTGCCAATGGTCCAGTTCCCTCTACACCCCGCCGAGGAGG < 41bp 0.305289413527187 0.733459469261499 0.7208506 0.90766203 prediction 0.466918938522997 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132817 chr1:161132821 nonsynonymous SNV 0.166 0 25 hm5C_associated_SNPs_113695 0 0 2 GRWD1 POSTAR2 ENCODE chr1:161132786-161132847
64251 chr19 41263268 41263268 1 + C T STAD 41263267 + 41263247 41263287 41 GTCCCTGTACGCCATCTTCTCCCAGTTTGGCCAGATCCTGG GTCCCTGTACGCCATCTTCTCTCAGTTTGGCCAGATCCTGG < 41bp 0.531902553875107 0.765359312746938 0.034348905 0.030560642 prediction 0.466913517743662 Functional Gain - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41263267 chr19:41263268 synonymous SNV . 0 22 hm5C_associated_SNPs_113696 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41263247-41263270
64251 chr20 56138725 56138725 1 + C G SKCM 56138724 + 56138704 56138744 41 CATGATGAACCCCAGCCTCCCCGGGTGGAAGGTTGAGTGCG CATGATGAACCCCAGCCTCCCGGGGTGGAAGGTTGAGTGCG < 41bp 0.642650434715439 0.876098088155651 0.86338776 0.92199546 prediction 0.466895306880422 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56138724 chr20:56138725 synonymous SNV . 0 22 hm5C_associated_SNPs_113702 0 0 4 BUD13 POSTAR2 ENCODE chr20:56138720-56138826
64251 chr12 57861128 57861128 1 + C T MESO 57861127 + 57861107 57861147 41 GTCCCCCAGTTTGAAGGGTGCCGGAAGTCATACTCACGCCT GTCCCCCAGTTTGAAGGGTGCTGGAAGTCATACTCACGCCT < 41bp 0.484087670048761 0.733440476271348 0.58833236 0.30841774 prediction 0.466880952542697 Functional Gain - GLI1 ENSG00000111087 CDS Human protein_coding chr12:57861127 chr12:57861128 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_113707 0 0 6 METTL14 POSTAR2 GSE46705,GSM1135008 chr12:57861100-57861160
64251 chr9 101589211 101589211 1 + C T rs59362219 101589210 + 101589190 101589230 41 GCCACGAAGGGTGGCTGGAGCCGCTGCTGCAGAGGTACGTG GCCACGAAGGGTGGCTGGAGCTGCTGCTGCAGAGGTACGTG < 41bp 0.48921364200798 0.733435530411581 0.8473746 0.6218546 prediction 0.466871060823163 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101589210 chr9:101589211 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_113711 1 0 1 DDX24 POSTAR2 ENCODE chr9:101589150-101589219
64251 chr8 99142281 99142281 1 + C T UCEC 99142280 + 99142260 99142300 41 GCTCGAAGATGTCACATGAACCGGACGCTAGAATTTAACCG GCTCGAAGATGTCACATGAACTGGACGCTAGAATTTAACCG < 41bp 0.526205589417609 0.75963837513403 0.048013538 0.021898508 prediction 0.466865571432842 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99142280 chr8:99142281 nonsynonymous SNV 0.535 2 22 hm5C_associated_SNPs_113712 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:99142264-99142281
64251 chr1 10460570 10460570 1 + C T COAD 10460569 + 10460549 10460589 41 GTCTCCAAGCTGAAGAAGCCCCGGCGGATCATCCTCCTGGT GTCTCCAAGCTGAAGAAGCCCTGGCGGATCATCCTCCTGGT < 41bp 0.499028395080108 0.733430875909169 0.8202124 0.64232737 prediction 0.466861751818338 Functional Gain - PGD ENSG00000142657 CDS Human protein_coding chr1:10460569 chr1:10460570 nonsynonymous SNV 0.685 4 22 hm5C_associated_SNPs_113714 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:10460540-10460600
64251 chr19 14508949 14508949 1 + C T SKCM 14508948 + 14508928 14508968 41 AGCTCAGCCGAGGTCACCATCCAGGTAAGGGCAGGATGCTG AGCTCAGCCGAGGTCACCATCTAGGTAAGGGCAGGATGCTG < 41bp 0.515430278046889 0.748834174482063 0.9188552 0.35558474 prediction 0.466807792870349 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14508948 chr19:14508949 stopgain 0.141 0 22 hm5C_associated_SNPs_113722 0 0 1 PRPF8 POSTAR2 ENCODE chr19:14508939-14508995
64251 chr2 176981722 176981722 1 + T A LUAD 176981718 + 176981698 176981738 41 ATGGAATGCAAACCTGTGGACTGCTCCCGTCTCTGGCCAAA ATGGAATGCAAACCTGTGGACTGCACCCGTCTCTGGCCAAA < 41bp 0.408194009653344 0.733401790197373 0.06718466 0.066519886 prediction 0.466803580394745 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981718 chr2:176981722 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_113723 0 0 20 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:176981665-176981735
64251 chr11 66291263 66291263 1 + C G rs35209408 66291262 + 66291242 66291282 41 GAACCTCCTGGAGCAGCATTCCCGGGGCCTGCAGGCCGTCA GAACCTCCTGGAGCAGCATTCGCGGGGCCTGCAGGCCGTCA < 41bp 0.648199957048184 0.881589933683865 0.8947326 0.9265505 prediction 0.466779953271362 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66291262 chr11:66291263 synonymous SNV . 0 22 hm5C_associated_SNPs_113726 0 0 1 PPIG POSTAR2 ENCODE chr11:66291236-66291293
64251 chr17 28750024 28750024 1 + C T UCEC 28750023 + 28750003 28750043 41 TGATGGAGATATCTGATAATCCGGGTGTCCATGAACCAGGT TGATGGAGATATCTGATAATCTGGGTGTCCATGAACCAGGT < 41bp 0.503458299935533 0.736840737998869 0.87887716 0.7461221 prediction 0.466764876126671 Functional Gain - CPD ENSG00000108582 CDS Human protein_coding chr17:28750023 chr17:28750024 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_113730 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:28749962-28750032
64251 chr19 35500854 35500854 1 + C T UCEC 35500853 + 35500833 35500873 41 GAAACTGTTCAGCAAACTCCCCGAAGCAGAACGCCTCATTG GAAACTGTTCAGCAAACTCCCTGAAGCAGAACGCCTCATTG < 41bp 0.482704912628133 0.733381279623865 0.30080467 0.2826383 prediction 0.46676255924773 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35500853 chr19:35500854 synonymous SNV . 0 22 hm5C_associated_SNPs_113731 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:35500806-35500867
64251 chr8 97274405 97274405 1 + T A UCEC 97274401 + 97274381 97274421 41 ACCGGCCGCATACCATCACCCTGCTCAGCTTCACCATCGTC ACCGGCCGCATACCATCACCCTGCACAGCTTCACCATCGTC < 41bp 0.392789347586862 0.733379047235547 0.003693074 0.003167063 prediction 0.466758094471094 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97274401 chr8:97274405 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_113733 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:97274371-97274408
64251 chr2 47250579 47250579 1 + C T rs144064667 47250578 + 47250558 47250598 41 TCCAAGCAAGATGAATTGCACCGGAAGGCACTGCAGACGCT TCCAAGCAAGATGAATTGCACTGGAAGGCACTGCAGACGCT < 41bp 0.549325377143597 0.782695988065905 0.18476757 0.25761795 prediction 0.466741221844617 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47250578 chr2:47250579 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_113736 0 0 1 BUD13 POSTAR2 ENCODE chr2:47250573-47250616
64251 chr12 121134226 121134226 1 + C T COAD 121134225 + 121134205 121134245 41 AAAAAACAGACCAATAAGAACCGGGTGCAGTCAGGCCCCCG AAAAAACAGACCAATAAGAACTGGGTGCAGTCAGGCCCCCG < 41bp 0.499233782513371 0.733366779087278 0.83771706 0.750479 prediction 0.466733558174556 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121134225 chr12:121134226 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_113738 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr12:121134208-121134245
64251 chr2 20647363 20647363 1 + T G BLCA 20647361 + 20647341 20647381 41 TTCGAGAACTATGTGGCCGACATTGAGGTGGACGGCAAGCA TTCGAGAACTATGTGGCCGACAGTGAGGTGGACGGCAAGCA < 41bp 0.392235059643699 0.733362391484788 0.2792098 0.4116693 prediction 0.466724782969576 Functional Gain - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647361 chr2:20647363 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_113742 0 0 10 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:20647300-20647380
64251 chr19 50361890 50361890 1 + C T COAD 50361889 + 50361869 50361909 41 GAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTT GAGACACTGAAGAGCCTGTGCTGGATCATGGACAATGGCTT < 41bp 0.541356130015775 0.774717751210201 0.44159544 0.13483807 prediction 0.466723242388851 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50361889 chr19:50361890 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_113743 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:50361851-50361894
64251 chr7 150771283 150771283 1 + C A LUAD 150771279 + 150771259 150771299 41 GGCAGGGGAAGCCCCGGGGCCAGCCCAACACGGCCCTGCTG GGCAGGGGAAGCCCCGGGGCCAGCACAACACGGCCCTGCTG < 41bp 0.309233538002198 0.733345795342926 0.48174044 0.46073392 prediction 0.466691590685852 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771279 chr7:150771283 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_113747 0 0 2 GRSF1 POSTAR2 ENCODE chr7:150771208-150771317
64251 chr6 142689014 142689014 1 + C A LUAD 142689013 + 142688993 142689033 41 TTTTCAAGTGACTTTAGCATCCAGAAGAAAGGTTTCAATGC TTTTCAAGTGACTTTAGCATCAAGAAGAAAGGTTTCAATGC < 41bp 0.523555699321795 0.756889482724824 0.32181376 0.48830795 prediction 0.466667566806058 Functional Gain - ADGRG6 ENSG00000112414 CDS Human protein_coding chr6:142689013 chr6:142689014 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_113756 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:142688989-142689027
64251 chr12 7293961 7293961 1 + C T STAD 7293960 + 7293940 7293980 41 AATGGCCTCATCCACCCACCCCGAAGGGAGCCTGCTCTCAT AATGGCCTCATCCACCCACCCTGAAGGGAGCCTGCTCTCAT < 41bp 0.460843850654931 0.733331724673994 0.30894434 0.19755122 prediction 0.466663449347988 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7293960 chr12:7293961 stopgain 0.907 1 22 hm5C_associated_SNPs_113758 0 0 1 SND1 POSTAR2 ENCODE chr12:7293959-7293992
64251 chr20 39750787 39750787 1 + A G SKCM 39750784 + 39750764 39750804 41 AATTATCTGGACCCTAGGATCACAGTGGCTTGGTAAGTGTT AATTATCTGGACCCTAGGATCACGGTGGCTTGGTAAGTGTT < 41bp 0.501941877913065 0.735272872750284 0.94050336 0.95447016 prediction 0.466661989674437 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39750784 chr20:39750787 synonymous SNV . 0 24 hm5C_associated_SNPs_113759 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:39750766-39750792
64251 chrX 129173184 129173184 1 + C T SKCM 129173183 + 129173163 129173203 41 GCTGTCCTATGGGGCCGATCCCACACTGGCTACCTACTCGG GCTGTCCTATGGGGCCGATCCTACACTGGCTACCTACTCGG < 41bp 0.462969176934281 0.733328219647903 0.3882529 0.93975776 prediction 0.466656439295805 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129173183 chrX:129173184 synonymous SNV . 0 22 hm5C_associated_SNPs_113760 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129173174-129173202
64251 chr19 35769969 35769969 1 + A G UCEC 35769966 + 35769946 35769986 41 TGCAGATGGACAACGAGCTCCTGAGGCAGCAGGTGGGTGCG TGCAGATGGACAACGAGCTCCTGGGGCAGCAGGTGGGTGCG < 41bp 0.516947584232908 0.750270530558369 0.7967194 0.89220405 prediction 0.466645892650922 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35769966 chr19:35769969 nonsynonymous SNV 0.982 5 24 hm5C_associated_SNPs_113763 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:35769950-35769972
64251 chr18 21739821 21739821 1 + C T LUAD 21739820 + 21739800 21739840 41 TGAGAAATACCAGAAACATACCCTAAGTCCCCAGAATGCTA TGAGAAATACCAGAAACATACTCTAAGTCCCCAGAATGCTA < 41bp 0.52271680195524 0.756037064639667 0.28765595 0.93239003 prediction 0.466640525368854 Functional Gain - CABYR ENSG00000154040 CDS Human protein_coding chr18:21739820 chr18:21739821 synonymous SNV . 0 22 hm5C_associated_SNPs_113764 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:21739763-21739823
64251 chr11 62502996 62502996 1 + C T SKCM 62502995 + 62502975 62503015 41 TCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTG TCTGCAGGACTATGACCAGGCTCGCCACTACCTCCTGGCTG < 41bp 0.485506533286394 0.733309165067531 0.07004833 0.07990271 prediction 0.466618330135062 Functional Gain - TTC9C ENSG00000162222 CDS Human protein_coding chr11:62502995 chr11:62502996 synonymous SNV . 0 22 hm5C_associated_SNPs_113769 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:62502968-62502996
64251 chr10 124895758 124895758 1 + C A rs558356019 124895757 + 124895737 124895777 41 GCCAGCCTCGGCTGCCGCCGCCGCCGCCGCTGCCGCTGCCG GCCAGCCTCGGCTGCCGCCGCAGCCGCCGCTGCCGCTGCCG < 41bp 0.50647710991901 0.739771977836768 0.7788179 0.8331778 prediction 0.466589735835516 Functional Gain - HMX3 ENSG00000188620 CDS Human protein_coding chr10:124895757 chr10:124895758 synonymous SNV . 0 22 hm5C_associated_SNPs_113772 0 0 1 GEMIN5 POSTAR2 ENCODE chr10:124895744-124895767
64251 chr4 140394075 140394075 1 + T C UCEC 140394073 + 140394053 140394093 41 GCCATACAGGTACCCACAGACTTGGCACAAAAATTTGCTGA GCCATACAGGTACCCACAGACTCGGCACAAAAATTTGCTGA < 41bp 0.457342128542218 0.73329105053362 0.042025387 0.008818746 prediction 0.466582101067241 Functional Gain - RAB33B ENSG00000172007 CDS Human protein_coding chr4:140394073 chr4:140394075 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_113773 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr4:140394060-140394080
64251 chr3 110831177 110831177 1 + C T SARC 110831176 + 110831156 110831196 41 TCTGCAAAGCTGTTACATTCCCGCTTGGAAATGCCCAGTCC TCTGCAAAGCTGTTACATTCCTGCTTGGAAATGCCCAGTCC < 41bp 0.548088556413077 0.781376412755699 0.03609374 0.039952517 prediction 0.466575712685244 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110831176 chr3:110831177 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_113774 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:110831161-110831201
64251 chr2 192255112 192255112 1 + C T UCEC 192255111 + 192255091 192255131 41 CTGGGGCTTTTGGAGAACGTCCGAGTGCGGAGGGCAGGCTA CTGGGGCTTTTGGAGAACGTCTGAGTGCGGAGGGCAGGCTA < 41bp 0.48401955687555 0.733285395048363 0.1174584 0.119186014 prediction 0.466570790096726 Functional Gain - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192255111 chr2:192255112 stopgain 0.973 1 22 hm5C_associated_SNPs_113775 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:192255111-192255112
64251 chr19 34297838 34297838 1 + C T BLCA 34297837 + 34297817 34297857 41 AAGCAACATTATTTCATTGACCGGGATGGGGAGATTTTCCG AAGCAACATTATTTCATTGACTGGGATGGGGAGATTTTCCG < 41bp 0.547614581796088 0.780893635046881 0.41284552 0.36729822 prediction 0.466558106501586 Functional Gain - KCTD15 ENSG00000153885 CDS Human protein_coding chr19:34297837 chr19:34297838 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_113777 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:34297781-34297852
64251 chr16 686929 686929 1 + C G rs115649368 686925 + 686905 686945 41 TGGCGACTGCATAGGAGGACCCAGCTGGCGGGACCGCGAGG TGGCGACTGCATAGGAGGACCCAGGTGGCGGGACCGCGAGG < 41bp 0.449257956156842 0.733276897326262 0.46766335 0.70128554 prediction 0.466553794652524 Functional Gain - METTL26 ENSG00000130731 upstream Human protein_coding chr16:686925 chr16:686929 . . 0 25 hm5C_associated_SNPs_113778 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:686901-686932
64251 chr3 135974781 135974781 1 + A G ESCA 135974778 + 135974758 135974798 41 AGCGACATGTTTGTGGAACACAGATGTGCAGATTTTGGAAT AGCGACATGTTTGTGGAACACAGGTGTGCAGATTTTGGAAT < 41bp 0.506748375843632 0.740024938596495 0.3888139 0.6003063 prediction 0.466553125505725 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:135974778 chr3:135974781 synonymous SNV . 0 24 hm5C_associated_SNPs_113779 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:135974765-135974792
64251 chr12 4791444 4791444 1 + C T SKCM 4791443 + 4791423 4791463 41 CACAGATTGTTCCTCCCATTCCCCTTGCCGCTTTTTGCCTA CACAGATTGTTCCTCCCATTCTCCTTGCCGCTTTTTGCCTA < 41bp 0.453926446190418 0.733274606501639 0.01861599 0.051209778 prediction 0.466549213003278 Functional Gain - NDUFA9 ENSG00000139180;ENSG00000255639 CDS Human other chr12:4791443 chr12:4791444 nonsynonymous SNV 0.192 1 22 hm5C_associated_SNPs_113780 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:4791431-4791459
64251 chr20 37555069 37555069 1 + C A rs80348623 37555065 + 37555045 37555085 41 CGCCGGTTTTTGTCCGAGGGCTGTCGAGTCCGAGCGCCGCC CGCCGGTTTTTGTCCGAGGGCTGTAGAGTCCGAGCGCCGCC < 41bp 0.342604082888199 0.733273399310196 0.38708884 0.5681319 prediction 0.466546798620391 Functional Gain - FAM83D ENSG00000101447 CDS Human protein_coding chr20:37555065 chr20:37555069 stopgain 0.000 0 25 hm5C_associated_SNPs_113782 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:37555060-37555080
64251 chr16 89999963 89999963 1 + T C OV 89999961 + 89999941 89999981 41 TCAGGGGCCTTTGGACATCTCTTCAGGCCTGACAATTTCAT TCAGGGGCCTTTGGACATCTCTCCAGGCCTGACAATTTCAT < 41bp 0.437169546540079 0.733269357976371 0.15723112 0.9460292 prediction 0.466538715952743 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:89999961 chr16:89999963 nonsynonymous SNV 0.928 4 23 hm5C_associated_SNPs_113784 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:89999950-89999978
64251 chr6 33373995 33373995 1 + C G COAD 33373991 + 33373971 33374011 41 AGGTGGACGCCCTGCTTCATCTGGCCCGCCAGAATCGGGCT AGGTGGACGCCCTGCTTCATCTGGGCCGCCAGAATCGGGCT < 41bp 0.633312516089186 0.866575707145711 0.1768071 0.44112968 prediction 0.466526382113049 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33373991 chr6:33373995 nonsynonymous SNV 0.003 4 25 hm5C_associated_SNPs_113788 0 0 14 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:33373975-33373998
64251 chr6 17601186 17601186 1 + C G rs374944606 17601185 + 17601165 17601205 41 CTACTTCCTGAGCCCCGGGGCCGCGGGGCCTGACCCGCGGA CTACTTCCTGAGCCCCGGGGCGGCGGGGCCTGACCCGCGGA < 41bp 0.634982580118307 0.868231675075671 0.41056326 0.55615306 prediction 0.466498189914727 Functional Gain - FAM8A1 ENSG00000137414 CDS Human protein_coding chr6:17601185 chr6:17601186 synonymous SNV . 0 22 hm5C_associated_SNPs_113795 0 0 4 DROSHA POSTAR2 ENCODE chr6:17601143-17601199
64251 chr10 52724197 52724197 1 + C A rs114557761 52724196 + 52724176 52724216 41 CCAAGGAGACCACTAACCCACCGGGAGGAACGAACAACTCT CCAAGGAGACCACTAACCCACAGGGAGGAACGAACAACTCT < 41bp 0.494997578736326 0.73324014867195 0.4382649 0.83457303 prediction 0.466480297343899 Functional Gain - A1CF;PRKG1 ENSG00000261368 ncRNA_exonic Human lincRNA chr10:52724196 chr10:52724197 . . 0 22 hm5C_associated_SNPs_113798 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:52724196-52724234
64251 chr5 619187 619187 1 + T A UCEC 619183 + 619163 619203 41 ACATTCTCTGATGAGTTTAACAGGTCTGAAATCTTTGGATC ACATTCTCTGATGAGTTTAACAGGACTGAAATCTTTGGATC < 41bp 0.637852760660916 0.871062615024028 0.8985482 0.90374744 prediction 0.466419708726224 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:619183 chr5:619187 synonymous SNV . 0 25 hm5C_associated_SNPs_113806 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:619151-619189
64251 chr3 141161800 141161800 1 + A G LUSC 141161797 + 141161777 141161817 41 CTGGACTTGAGGGCAAGTTTCAAAAAGGTCTCCGACTCCAT CTGGACTTGAGGGCAAGTTTCAAGAAGGTCTCCGACTCCAT < 41bp 0.51312282311962 0.746329022463629 0.5210285 0.9324234 prediction 0.466412398688019 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161797 chr3:141161800 synonymous SNV . 0 24 hm5C_associated_SNPs_113807 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:141161764-141161802
64251 chr9 130570896 130570896 1 + C T COAD 130570895 + 130570875 130570915 41 GGAAGGGGGGCCGCCGCTGACCCTGGGCCTGGAGGGGGAGC GGAAGGGGGGCCGCCGCTGACTCTGGGCCTGGAGGGGGAGC < 41bp 0.553847586872564 0.787052445362757 0.32549343 0.3784093 prediction 0.466409716980385 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130570895 chr9:130570896 synonymous SNV . 0 22 hm5C_associated_SNPs_113808 0 0 10 BUD13 POSTAR2 ENCODE chr9:130570872-130570937
64251 chr18 61570440 61570440 1 + T C UCEC 61570438 + 61570418 61570458 41 TTATGACAGGGAGAACTGGACATGGAGGCCCACAGTTTGTG TTATGACAGGGAGAACTGGACACGGAGGCCCACAGTTTGTG < 41bp 0.569604435842178 0.802796192531017 0.35032523 0.4723949 prediction 0.466383513377678 Functional Gain - SERPINB2 ENSG00000197632 CDS Human protein_coding chr18:61570438 chr18:61570440 synonymous SNV . 0 23 hm5C_associated_SNPs_113813 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr18:61570440-61570520
64251 chr14 50088160 50088160 1 + C A PRAD 50088159 + 50088139 50088179 41 CGGCCGCGGTGGGGACCACCCCTCTGTGGCTGTGGGCATCC CGGCCGCGGTGGGGACCACCCATCTGTGGCTGTGGGCATCC < 41bp 0.545010320187827 0.778201153380025 0.061387002 0.12444487 prediction 0.466381666384397 Functional Gain - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088159 chr14:50088160 synonymous SNV . 0 22 hm5C_associated_SNPs_113815 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:50088152-50088180
64251 chr9 140510150 140510150 1 - T C rs538592637 140510153 - 140510133 140510173 41 GTTTCTCAGCAGGGGAGGTCCACACCACACCGCTTGGGAAC GTTTCTCAGCAGGGGAGGTCCACGCCACACCGCTTGGGAAC < 41bp 0.543084148306937 0.776262880380453 0.084592044 0.1751844 prediction 0.466357464147032 Functional Gain - ARRDC1-AS1 ENSG00000203993 CDS Human antisense chr9:140510153 chr9:140510150 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_113820 0 0 1 LSM11 POSTAR2 ENCODE chr9:140510098-140510181
64251 chr16 82131836 82131836 1 + C A KIRC 82131835 + 82131815 82131855 41 TAGCCAGCAAGGACTTCTCTCCGGTGCTGCGGGACATCCAG TAGCCAGCAAGGACTTCTCTCAGGTGCTGCGGGACATCCAG < 41bp 0.59075783376627 0.823936460611853 0.8746767 0.9201627 prediction 0.466357253691166 Functional Gain - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82131835 chr16:82131836 nonsynonymous SNV 0.008 4 22 hm5C_associated_SNPs_113821 0 0 2 RPS3 POSTAR2 ENCODE chr16:82131813-82131877
64251 chr3 183474360 183474360 1 + C T SKCM 183474359 + 183474339 183474379 41 CCATCACCATTGCCTCGAACCCCGACTTCCACTCCAGTCCA CCATCACCATTGCCTCGAACCTCGACTTCCACTCCAGTCCA < 41bp 0.585204276461698 0.8183741340418 0.089741796 0.7739625 prediction 0.466339715160205 Functional Gain - YEATS2 ENSG00000163872 CDS Human protein_coding chr3:183474359 chr3:183474360 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_113827 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr3:183474360-183474380
64251 chr17 40934919 40934919 1 + C T STAD 40934918 + 40934898 40934938 41 GGTTTGCATCGTGCTGGTCACCGAACTCATGACCTCGGGCA GGTTTGCATCGTGCTGGTCACTGAACTCATGACCTCGGGCA < 41bp 0.542441505661497 0.775611014032513 0.3117085 0.2760427 prediction 0.466339016742033 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40934918 chr17:40934919 synonymous SNV . 0 22 hm5C_associated_SNPs_113828 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40934884-40934939
64251 chr16 81348861 81348861 1 + T C COAD 81348859 + 81348839 81348879 41 ATCCCGGTGCAGAAGAACATCCTGGCGGCGGCCAGCCCGTA ATCCCGGTGCAGAAGAACATCCCGGCGGCGGCCAGCCCGTA < 41bp 0.526053757589138 0.759209036343351 0.3339677 0.45367858 prediction 0.466310557508426 Functional Gain - GAN ENSG00000261609 CDS Human protein_coding chr16:81348859 chr16:81348861 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_113833 0 0 2 GEMIN5 POSTAR2 ENCODE chr16:81348823-81348904
64251 chr20 48600685 48600685 1 + C T LUAD 48600684 + 48600664 48600704 41 TCCCAGGCTTGGGCCAAGTGCCCAAGCAGCTGGCCCAGCTC TCCCAGGCTTGGGCCAAGTGCTCAAGCAGCTGGCCCAGCTC < 41bp 0.560035043982932 0.793178676333737 0.1781463 0.7481096 prediction 0.466287264701609 Functional Gain - SNAI1 ENSG00000124216 CDS Human protein_coding chr20:48600684 chr20:48600685 nonsynonymous SNV 0.932 1 22 hm5C_associated_SNPs_113839 0 0 4 GEMIN5 POSTAR2 ENCODE chr20:48600635-48600693
64251 chr5 71495673 71495673 1 + C A LUAD 71495672 + 71495652 71495692 41 AGACCGACTCTGATGTTCCCCCGGAGACTGAAGAGTGCCCC AGACCGACTCTGATGTTCCCCAGGAGACTGAAGAGTGCCCC < 41bp 0.535215666645968 0.768341869147338 0.2668879 0.5861702 prediction 0.46625240500274 Functional Gain - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71495672 chr5:71495673 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_113846 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr5:71495634-71495681
64251 chr17 40936445 40936445 1 + C T SKCM 40936444 + 40936424 40936464 41 GCTGTGGACCCTACAGGGACCCCGGAATTCATGGCCCCCGA GCTGTGGACCCTACAGGGACCTCGGAATTCATGGCCCCCGA < 41bp 0.493101929939716 0.733119517755656 0.3834886 0.8644893 prediction 0.466239035511311 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40936444 chr17:40936445 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_113848 0 0 1 SRSF1 POSTAR2 ENCODE chr17:40936443-40936483
64251 chr2 190535319 190535319 1 + C T STAD 190535318 + 190535298 190535338 41 TTACAGCCTCTGCTCTTCTGCCCAAACGGGCCATGCAGTTT TTACAGCCTCTGCTCTTCTGCTCAAACGGGCCATGCAGTTT < 41bp 0.476989495908295 0.733113695410586 0.002292335 0.0033754706 prediction 0.466227390821172 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190535318 chr2:190535319 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_113849 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:190535289-190535330
64251 chr1 1334924 1334924 1 + C G rs535876038 1334923 + 1334903 1334943 41 GACTCCGCGGTGCCGGCCGACCCGGAAGCATGTCTGTCCCT GACTCCGCGGTGCCGGCCGACGCGGAAGCATGTCTGTCCCT < 41bp 0.571826099756843 0.804926736884922 0.20043465 0.7155535 prediction 0.466201274256158 Functional Gain - LOC148413 ENSG00000224870 UTR5 Human processed_transcript chr1:1334923 chr1:1334924 . . 0 22 hm5C_associated_SNPs_113854 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:1334921-1334943
64251 chr7 56062600 56062600 1 + C T SKCM 56062599 + 56062579 56062619 41 TCTTACAGGGCTCGTGCAATCCGCTTCAGACAGGATGGTAA TCTTACAGGGCTCGTGCAATCTGCTTCAGACAGGATGGTAA < 41bp 0.538590080744868 0.771684688933919 0.22315356 0.1883024 prediction 0.466189216378103 Functional Gain - NIPSNAP2 ENSG00000146729 CDS Human protein_coding chr7:56062599 chr7:56062600 nonsynonymous SNV 0.866 4 22 hm5C_associated_SNPs_113857 0 0 1 U2AF2 POSTAR2 ENCODE chr7:56062578-56062656
64251 chr14 75359558 75359558 1 + C T SKCM 75359557 + 75359537 75359577 41 CTGCTCCTGCTAAGGCCAAGCCGGCTGAAGCTCCTGCTGCT CTGCTCCTGCTAAGGCCAAGCTGGCTGAAGCTCCTGCTGCT < 41bp 0.489838300663151 0.733085744107968 0.8801733 0.7530316 prediction 0.466171488215935 Functional Gain - DLST ENSG00000119689 CDS Human protein_coding chr14:75359557 chr14:75359558 nonsynonymous SNV 0.971 2 22 hm5C_associated_SNPs_113860 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:75359525-75359563
64251 chr17 80442103 80442103 1 + A G rs9914776 80442100 + 80442080 80442120 41 TGGGGGCGGTGACCTCGATACCCAGCAAGGCCCAGGGCTCC TGGGGGCGGTGACCTCGATACCCGGCAAGGCCCAGGGCTCC < 41bp 0.530580220378097 0.763664614080681 0.04232222 0.11238104 prediction 0.466168787405167 Functional Gain - NARF ENSG00000141562 UTR3 Human protein_coding chr17:80442100 chr17:80442103 . . 0 24 hm5C_associated_SNPs_113861 0 0 10 TARDBP POSTAR2 DRA001158,DRS012385 chr17:80442096-80442134
64251 chr19 4793717 4793717 1 + C A GBM 4793713 + 4793693 4793733 41 CACCAATGCCTTCAAGAAGACGGCCTACGAGCTGCTGGACG CACCAATGCCTTCAAGAAGACGGCATACGAGCTGCTGGACG < 41bp 0.326932476505096 0.73308238134715 0.1551466 0.543039 prediction 0.4661647626943 Functional Gain - FEM1A ENSG00000141965 CDS Human protein_coding chr19:4793713 chr19:4793717 synonymous SNV . 0 25 hm5C_associated_SNPs_113862 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:4793705-4793755
64251 chr6 52448031 52448031 1 + C G rs73429569 52448030 + 52448010 52448050 41 AATGTATGTGGAGCAGGCACCCGGAGTGTCTATGCCAGGAT AATGTATGTGGAGCAGGCACCGGGAGTGTCTATGCCAGGAT < 41bp 0.6271153128764 0.860191515480854 0.5393107 0.90303576 prediction 0.466152405208908 Functional Gain - TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52448030 chr6:52448031 . . 0 22 hm5C_associated_SNPs_113865 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:52448007-52448040
64251 chr16 28993316 28993316 1 + C A THCA 28993315 + 28993295 28993335 41 CCGGCATTCCTGCTGCGTTCCCGCGTGGTCCTTGGGGAGAC CCGGCATTCCTGCTGCGTTCCAGCGTGGTCCTTGGGGAGAC < 41bp 0.558491371540954 0.791560003290013 0.39662772 0.74759513 prediction 0.466137263498118 Functional Gain - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28993315 chr16:28993316 nonsynonymous SNV 0.847 1 22 hm5C_associated_SNPs_113867 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:28993299-28993321
64251 chr6 105406114 105406114 1 + C A LUSC 105406113 + 105406093 105406133 41 GGATTCATCTCCATGATAAACCGAGAGGGAAGCCCCTTGGA GGATTCATCTCCATGATAAACAGAGAGGGAAGCCCCTTGGA < 41bp 0.474954206093555 0.733067748757393 0.27344733 0.84301865 prediction 0.466135497514785 Functional Gain - LIN28B ENSG00000187772 CDS Human protein_coding chr6:105406113 chr6:105406114 synonymous SNV . 0 22 hm5C_associated_SNPs_113868 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:105406100-105406120
64251 chr17 41006589 41006589 1 + C T STAD 41006588 + 41006568 41006608 41 GCTGGAGATGGAGGAGCAGGCCGCCTTCCTCGTGGGAAGCG GCTGGAGATGGAGGAGCAGGCTGCCTTCCTCGTGGGAAGCG < 41bp 0.520323421401075 0.753383925865001 0.30530357 0.25129992 prediction 0.466121008927851 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006588 chr17:41006589 synonymous SNV . 0 22 hm5C_associated_SNPs_113870 0 0 2 PPIG POSTAR2 ENCODE chr17:41006505-41006620
64251 chr7 138819480 138819480 1 + C T SKCM 138819479 + 138819459 138819499 41 AGAAGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTACTT AGAAGAAAGGTAGGAAGATTCTAAAACTAGAGGAGCTACTT < 41bp 0.494513111274506 0.733058406882955 0.12728724 0.19577855 prediction 0.46611681376591 Functional Gain - TTC26 ENSG00000105948 CDS Human protein_coding chr7:138819479 chr7:138819480 nonsynonymous SNV 0.909 4 22 hm5C_associated_SNPs_113871 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:138819476-138819507
64251 chr11 64811762 64811762 1 + C T UCEC 64811761 + 64811741 64811781 41 CTGCGCGCCTGCCCGCCCCTCCGCAAGGCCTTGGCGGTAGA CTGCGCGCCTGCCCGCCCCTCTGCAAGGCCTTGGCGGTAGA < 41bp 0.55095443088751 0.784011520902788 0.31007627 0.84405184 prediction 0.466114180030556 Functional Gain - SAC3D1 ENSG00000168061 CDS Human protein_coding chr11:64811761 chr11:64811762 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_113873 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr11:64811742-64811769
64251 chr19 14574771 14574771 1 + C T SKCM 14574770 + 14574750 14574790 41 GCTTCTCCAGGATCCGAGGCCCGGACCACGGGGTAAGGAAG GCTTCTCCAGGATCCGAGGCCTGGACCACGGGGTAAGGAAG < 41bp 0.540662738541907 0.773707914816271 0.38177162 0.36909056 prediction 0.466090352548728 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574770 chr19:14574771 nonsynonymous SNV 0.041 2 22 hm5C_associated_SNPs_113882 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14574749-14574772
64251 chr1 213147353 213147353 1 + C T SKCM 213147352 + 213147332 213147372 41 AGTGAGAAGCCGGGGAAAATCCCTGTCCCCCAGAAGGAGAC AGTGAGAAGCCGGGGAAAATCTCTGTCCCCCAGAAGGAGAC < 41bp 0.586077604178851 0.819120383800023 0.40004498 0.38433957 prediction 0.466085559242345 Functional Gain - VASH2 ENSG00000143494 CDS Human protein_coding chr1:213147352 chr1:213147353 synonymous SNV . 0 22 hm5C_associated_SNPs_113884 0 0 1 BUD13 POSTAR2 ENCODE chr1:213147299-213147353
64251 chr14 29237494 29237494 1 + C A LUAD 29237490 + 29237470 29237510 41 GGCACCACGTCGGCCTACCCCAGCCACCCCATGCCCTACAG GGCACCACGTCGGCCTACCCCAGCAACCCCATGCCCTACAG < 41bp 0.701658190561365 0.934696490180563 0.32636106 0.35224086 prediction 0.466076599238396 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237490 chr14:29237494 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_113885 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:29237467-29237510
64251 chr7 89982177 89982177 1 + C T ACC 89982176 + 89982156 89982196 41 ACTCTTCACCAGGGGAGGATCCGGTGGAATGGGTTATCCTC ACTCTTCACCAGGGGAGGATCTGGTGGAATGGGTTATCCTC < 41bp 0.522498210473798 0.755535908371175 0.88711 0.6484641 prediction 0.466075395794754 Functional Gain - GTPBP10 ENSG00000105793 CDS Human protein_coding chr7:89982176 chr7:89982177 synonymous SNV . 0 22 hm5C_associated_SNPs_113886 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:89982155-89982178
64251 chr19 41086819 41086819 1 + C A rs114925319 41086815 + 41086795 41086835 41 AGATCCTGCTATGGGCTCTGCAGGCGGAAGGCGGTGGCTCC AGATCCTGCTATGGGCTCTGCAGGAGGAAGGCGGTGGCTCC < 41bp 0.697607995216194 0.930639635768232 0.8372062 0.8590625 prediction 0.466063281104078 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41086815 chr19:41086819 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_113892 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221663 chr19:41086800-41086820
64251 chr1 24861712 24861712 1 + C T UCEC 24861711 + 24861691 24861731 41 AAATTGCCCAGACGAGGCGCCCCGACCCTCCGACCGCAGCG AAATTGCCCAGACGAGGCGCCTCGACCCTCCGACCGCAGCG < 41bp 0.549312580102647 0.782344197056508 0.10386413 0.33833387 prediction 0.466063233907723 Functional Gain - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24861711 chr1:24861712 nonsynonymous SNV 0.065 3 22 hm5C_associated_SNPs_113893 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:24861689-24861720
64251 chr19 14507908 14507908 1 + C T UCEC 14507907 + 14507887 14507927 41 AGATGTGAATGAATGCACCTCCGGACAAAACCCGTGCCACA AGATGTGAATGAATGCACCTCTGGACAAAACCCGTGCCACA < 41bp 0.510252655608112 0.743273921729952 0.5093402 0.27944693 prediction 0.466042532243679 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14507907 chr19:14507908 synonymous SNV . 0 22 hm5C_associated_SNPs_113895 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:14507901-14507939
64251 chr19 38899466 38899466 1 + C T SKCM 38899465 + 38899445 38899485 41 CCCATGCCCACCTGGAGGAGCCGAAGAGAGGATGGAGGCCC CCCATGCCCACCTGGAGGAGCTGAAGAGAGGATGGAGGCCC < 41bp 0.521541430754233 0.754562608454896 0.6088317 0.46899316 prediction 0.466042355401327 Functional Gain - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38899465 chr19:38899466 stopgain 0.318 0 22 hm5C_associated_SNPs_113896 0 0 3 DDX6 POSTAR2 ENCODE chr19:38899435-38899609
64251 chr6 74183325 74183325 1 + C T LIHC 74183324 + 74183304 74183344 41 GTATTCTAAACAAGCATATACCGGACAATCCATCCATACCA GTATTCTAAACAAGCATATACTGGACAATCCATCCATACCA < 41bp 0.522812479901833 0.755830850299861 0.10224086 0.01823607 prediction 0.466036740796054 Functional Gain - MTO1 ENSG00000135297 CDS Human protein_coding chr6:74183324 chr6:74183325 nonsynonymous SNV 0.058 3 22 hm5C_associated_SNPs_113897 0 0 10 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr6:74183304-74183349
64251 chr11 94862660 94862660 1 + C G LUSC 94862659 + 94862639 94862679 41 TTTGACACTGCTTTTGGTACCCTGGGTGGCCTATTTCAGGT TTTGACACTGCTTTTGGTACCGTGGGTGGCCTATTTCAGGT < 41bp 0.418398353651806 0.733011961275017 0.35210818 0.8777481 prediction 0.466023922550033 Functional Gain - ENDOD1 ENSG00000149218 CDS Human protein_coding chr11:94862659 chr11:94862660 nonsynonymous SNV 0.761 0 22 hm5C_associated_SNPs_113898 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:94862627-94862662
64251 chr12 123889608 123889608 1 + A G COAD 123889605 + 123889585 123889625 41 ACATGTACTATTTTCAGTATCTGAGCAAAACCTACTGGTGA ACATGTACTATTTTCAGTATCTGGGCAAAACCTACTGGTGA < 41bp 0.520189030145508 0.753198386198111 0.9030236 0.92669934 prediction 0.466018712105206 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123889605 chr12:123889608 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_113899 0 0 4 BUD13 POSTAR2 ENCODE chr12:123889608-123889620
64251 chr19 7747293 7747293 1 + T G rs6952 7747290 + 7747270 7747310 41 TCTTCTCCGTGGCCGAGCTGCAGTCGCGCCTGGCCGCGCTG TCTTCTCCGTGGCCGAGCTGCAGGCGCGCCTGGCCGCGCTG < 41bp 0.687796114563141 0.920801960352176 0.3896359 0.87229955 prediction 0.466011691578071 Functional Gain - TRAPPC5 ENSG00000181029;ENSG00000269711 CDS Human other chr19:7747290 chr19:7747293 nonsynonymous SNV 0.605 0 24 hm5C_associated_SNPs_113900 0 0 7 DDX3X POSTAR2 ENCODE chr19:7747247-7747347
64251 chr6 170626883 170626883 1 + A G UCEC 170626880 + 170626860 170626900 41 AGAAATATGTTCTTCATCCCCTCAGGGCTAGCTGTGTTTAC AGAAATATGTTCTTCATCCCCTCGGGGCTAGCTGTGTTTAC < 41bp 0.524246038073113 0.75725104818149 0.02047214 0.03344953 prediction 0.466010020216754 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170626880 chr6:170626883 synonymous SNV . 0 24 hm5C_associated_SNPs_113903 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:170626861-170626884
64251 chr10 44101908 44101908 1 + C A rs56333360 44101904 + 44101884 44101924 41 GCGTGGTGCGAGCGCTGCACCAGCCCCTGGCTGGTGGTTAC GCGTGGTGCGAGCGCTGCACCAGCACCTGGCTGGTGGTTAC < 41bp 0.676948181207146 0.909942560974469 0.19041058 0.19045901 prediction 0.465988759534646 Functional Gain - ZNF485 ENSG00000198298 UTR5 Human protein_coding chr10:44101904 chr10:44101908 . . 0 25 hm5C_associated_SNPs_113906 0 0 1 DDX3X POSTAR2 ENCODE chr10:44101899-44101995
64251 chr4 89414248 89414248 1 + C T STAD 89414247 + 89414227 89414267 41 TGTTTGCAGAGATGATCCAGCCGGAATATGGGATGTTCATG TGTTTGCAGAGATGATCCAGCTGGAATATGGGATGTTCATG < 41bp 0.5447972884395 0.777791465629878 0.26218897 0.07148725 prediction 0.465988354380756 Functional Gain - HERC5 ENSG00000138646 CDS Human protein_coding chr4:89414247 chr4:89414248 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_113907 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr4:89414240-89414252
64251 chr5 633964 633964 1 + T C UCEC 633962 + 633942 633982 41 GATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTG GATGCGGATGACGAGGCAGTCCCGAACCTCATTGCAGAGTG < 41bp 0.593445799950595 0.826428077798886 0.35918874 0.54208523 prediction 0.465964555696582 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:633962 chr5:633964 nonsynonymous SNV 0.983 3 23 hm5C_associated_SNPs_113912 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:633908-633971
64251 chrX 24746001 24746001 1 + T C UCEC 24745999 + 24745979 24746019 41 GTCAGTCCACCACCGCTTGTCGTGATGGCTTTCAGCATGAA GTCAGTCCACCACCGCTTGTCGCGATGGCTTTCAGCATGAA < 41bp 0.437447040115116 0.732979150895664 0.24162468 0.22700003 prediction 0.465958301791328 Functional Gain - POLA1 ENSG00000101868 CDS Human protein_coding chrX:24745999 chrX:24746001 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_113914 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:24745968-24746023
64251 chr7 141478883 141478883 1 + C A STAD 141478879 + 141478859 141478899 41 ATTAATGTGACTTCTGCTTCCTTGCTAATACACTCCTTGAG ATTAATGTGACTTCTGCTTCCTTGATAATACACTCCTTGAG < 41bp 0.346556921046825 0.732977300211539 0.05389741 0.07843915 prediction 0.465954600423079 Functional Gain - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478879 chr7:141478883 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_113915 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:141478817-141478884
64251 chr14 24771230 24771230 1 + C T COAD 24771229 + 24771209 24771249 41 GTGGCTTTACAGGTTTTACACCGCAAACTTCCCCAGTTTTG GTGGCTTTACAGGTTTTACACTGCAAACTTCCCCAGTTTTG < 41bp 0.551540281762711 0.784505021515332 0.27379847 0.32943356 prediction 0.465929479505243 Functional Gain - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24771229 chr14:24771230 nonsynonymous SNV 0.003 3 22 hm5C_associated_SNPs_113921 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr14:24771220-24771240
64251 chr19 7711153 7711153 1 + C G rs142105943 7711149 + 7711129 7711169 41 CTGTAGGGCTCGGGGACCTCCAGCCGGCTGGAGCCGAGAGA CTGTAGGGCTCGGGGACCTCCAGCGGGCTGGAGCCGAGAGA < 41bp 0.61319195459438 0.846151066482542 0.88851905 0.93147564 prediction 0.465918223776324 Functional Gain - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711149 chr19:7711153 nonsynonymous SNV 0.213 0 25 hm5C_associated_SNPs_113922 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:7711136-7711164
64251 chr5 64920902 64920902 1 + C A UCEC 64920901 + 64920881 64920921 41 GGTCAAAATGGAAGTGAATCCCCCTAAACAGGAGCACCTGC GGTCAAAATGGAAGTGAATCCACCTAAACAGGAGCACCTGC < 41bp 0.484441298681874 0.732951736004043 0.07648954 0.08039421 prediction 0.465903472008086 Functional Gain - TRAPPC13 ENSG00000113597 CDS Human protein_coding chr5:64920901 chr5:64920902 synonymous SNV . 0 22 hm5C_associated_SNPs_113924 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:64920896-64920920
64251 chr11 114168708 114168708 1 + T A LUSC 114168704 + 114168684 114168724 41 GGAGACCTGCTGATTGACATCGGCTCTGGCCCCACTATCTA GGAGACCTGCTGATTGACATCGGCACTGGCCCCACTATCTA < 41bp 0.656999339468671 0.889949130332539 0.21788612 0.18442404 prediction 0.465899581727736 Functional Gain - NNMT ENSG00000166741 CDS Human protein_coding chr11:114168704 chr11:114168708 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_113925 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:114168695-114168737
64251 chr11 45948990 45948990 1 + C T LIHC 45948989 + 45948969 45949009 41 GCCTCACCAGTGCTTGCTGCCCGGCAGGACGTGGCCTACCA GCCTCACCAGTGCTTGCTGCCTGGCAGGACGTGGCCTACCA < 41bp 0.54516163585066 0.778110517489855 0.2668641 0.18657777 prediction 0.46589776327839 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45948989 chr11:45948990 nonsynonymous SNV 0.537 4 22 hm5C_associated_SNPs_113926 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:45948987-45949011
64251 chr6 36442821 36442821 1 + C T STAD 36442820 + 36442800 36442840 41 CACAGATTTTCACTGCTCATCCGGATACCATGCTGGGAAGG CACAGATTTTCACTGCTCATCTGGATACCATGCTGGGAAGG < 41bp 0.490214390842462 0.732946912848923 0.45978644 0.37718138 prediction 0.465893825697847 Functional Gain - KCTD20 ENSG00000112078 CDS Human protein_coding chr6:36442820 chr6:36442821 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_113929 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:36442789-36442827
64251 chr17 40837338 40837338 1 + C T UCEC 40837337 + 40837317 40837357 41 GTTCGCCTTCAGCTTCAAGACCGAGGAGAAGGACGGTCTTC GTTCGCCTTCAGCTTCAAGACTGAGGAGAAGGACGGTCTTC < 41bp 0.510327753938396 0.743274065936129 0.09903616 0.07572469 prediction 0.465892623995466 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40837337 chr17:40837338 synonymous SNV . 0 22 hm5C_associated_SNPs_113930 0 0 1 PPIG POSTAR2 ENCODE chr17:40837281-40837351
64251 chr7 150745987 150745987 1 + A G UCEC 150745984 + 150745964 150746004 41 GTTCTGGCCATGAAGCCCACCTCAGGCCCAGAGGAGGCCCG GTTCTGGCCATGAAGCCCACCTCGGGCCCAGAGGAGGCCCG < 41bp 0.533666229870419 0.766610559112831 0.04748264 0.070157975 prediction 0.465888658484824 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150745984 chr7:150745987 synonymous SNV . 0 24 hm5C_associated_SNPs_113932 0 0 3 PRPF8 POSTAR2 ENCODE chr7:150745899-150746052
64251 chr10 13222497 13222497 1 + A G UCEC 13222494 + 13222474 13222514 41 AGAAAATGACCGGCCGAAAACTGATCAGACTGTCTCAGATC AGAAAATGACCGGCCGAAAACTGGTCAGACTGTCTCAGATC < 41bp 0.515696468249949 0.74863031161594 0.181649 0.20369819 prediction 0.465867686731983 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13222494 chr10:13222497 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_113938 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr10:13222469-13222509
64251 chr3 56591237 56591237 1 + T C rs537934050 56591235 + 56591215 56591255 41 CAACCGACGTACACAAGGGGCTTGAGCGTTCTGTGGAGAGA CAACCGACGTACACAAGGGGCTCGAGCGTTCTGTGGAGAGA < 41bp 0.51235789723738 0.745287122181844 0.16644767 0.29012096 prediction 0.465858449888929 Functional Gain - CCDC66 ENSG00000180376 UTR5 Human protein_coding chr3:56591235 chr3:56591237 . . 0 23 hm5C_associated_SNPs_113939 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:56591229-56591254
64251 chr9 71862951 71862951 1 + C T UCEC 71862950 + 71862930 71862970 41 GGAAGGGATGGATGATGACCCCGAAGACCGCATGTCCTACT GGAAGGGATGGATGATGACCCTGAAGACCGCATGTCCTACT < 41bp 0.492676726964895 0.732924238422835 0.04267937 0.039031357 prediction 0.465848476845671 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71862950 chr9:71862951 synonymous SNV . 0 22 hm5C_associated_SNPs_113941 2 0 9 BUD13 POSTAR2 ENCODE chr9:71862922-71862976
64251 chr11 65619959 65619959 1 + C T COAD 65619958 + 65619938 65619978 41 GCTGGAGGGCCGGGTGGCTTCCGATGAGGACCTGAAGCTGT GCTGGAGGGCCGGGTGGCTTCTGATGAGGACCTGAAGCTGT < 41bp 0.487900011059488 0.732912465198232 0.4951436 0.3690415 prediction 0.465824930396465 Functional Gain - SNX32 ENSG00000172803 CDS Human protein_coding chr11:65619958 chr11:65619959 synonymous SNV . 0 22 hm5C_associated_SNPs_113946 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65619942-65619971
64251 chr6 147886331 147886331 1 + T C rs368956321 147886329 + 147886309 147886349 41 AGCAAGAGCTAGCTATTTTACTTCATAGCTAGTTTCTTGCA AGCAAGAGCTAGCTATTTTACTCCATAGCTAGTTTCTTGCA < 41bp 0.544345137447254 0.777240017834062 0.1759417 0.95791507 prediction 0.465789760773616 Functional Gain - SAMD5 ENSG00000203727 UTR3 Human protein_coding chr6:147886329 chr6:147886331 . . 0 23 hm5C_associated_SNPs_113955 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:147886308-147886333
64251 chr14 97009224 97009224 1 + C T UCEC 97009223 + 97009203 97009243 41 TTCCAGCACCCAAAGAAAATCCCGACAAGTAAGCCCTTTTC TTCCAGCACCCAAAGAAAATCTCGACAAGTAAGCCCTTTTC < 41bp 0.50011176878805 0.733004450748634 0.038393945 0.24320206 prediction 0.465785363921167 Functional Gain - PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97009223 chr14:97009224 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_113957 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:97009201-97009226
64251 chrX 142967607 142967607 1 + C A COAD 142967606 + 142967586 142967626 41 GCAGTGGAAGACCAACGAAGCCCAAGCCATTGAAACAGCTA GCAGTGGAAGACCAACGAAGCACAAGCCATTGAAACAGCTA < 41bp 0.528507158939008 0.761391106235996 0.04450938 0.055136234 prediction 0.465767894593975 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967606 chrX:142967607 synonymous SNV . 0 22 hm5C_associated_SNPs_113961 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:142967600-142967620
64251 chr12 4791454 4791454 1 + T G UCEC 4791451 + 4791431 4791471 41 GTTCCTCCCATTCCCCTTGCCGCTTTTTGCCTATCGGTAAG GTTCCTCCCATTCCCCTTGCCGCGTTTTGCCTATCGGTAAG < 41bp 0.337861902194722 0.732881595523777 0.011735231 0.19724736 prediction 0.465763191047554 Functional Gain - NDUFA9 ENSG00000139180;ENSG00000255639 CDS Human other chr12:4791451 chr12:4791454 nonsynonymous SNV 0.328 0 24 hm5C_associated_SNPs_113962 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:4791431-4791459
64251 chr17 27075299 27075299 1 + C T LUSC 27075298 + 27075278 27075318 41 AGAGCCATGAGGGTATGTGCCCCCAGGAGAGTGTCTACTGT AGAGCCATGAGGGTATGTGCCTCCAGGAGAGTGTCTACTGT < 41bp 0.588211908268082 0.821092162679156 0.09736067 0.9435415 prediction 0.465760508822147 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075298 chr17:27075299 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_113963 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr17:27075279-27075342
64251 chr12 109510129 109510129 1 + C G LUSC 109510128 + 109510108 109510148 41 AGCAGCAGTCAGAAATAACTCCCAAACAAATTACCTGCCGC AGCAGCAGTCAGAAATAACTCGCAAACAAATTACCTGCCGC < 41bp 0.416964580090948 0.732879181270162 0.3411675 0.19417557 prediction 0.465758362540324 Functional Gain - USP30 ENSG00000135093 CDS Human protein_coding chr12:109510128 chr12:109510129 nonsynonymous SNV 0.993 0 22 hm5C_associated_SNPs_113964 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109510119-109510144
64251 chr7 148921263 148921263 1 + C T COAD 148921262 + 148921242 148921282 41 AGCCTCCTCCTGCACGGCGCCCGCAGCAAGCCCTACTCGTG AGCCTCCTCCTGCACGGCGCCTGCAGCAAGCCCTACTCGTG < 41bp 0.502180139559033 0.735057703282952 0.13415432 0.37223002 prediction 0.465755127447838 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921262 chr7:148921263 nonsynonymous SNV 0.914 1 22 hm5C_associated_SNPs_113966 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:148921262-148921263
64251 chr10 94450100 94450100 1 + C A SKCM 94450099 + 94450079 94450119 41 CGCCCTGCTCCGCCACGACCCCCTGGGTAAGGCGGCCGGGC CGCCCTGCTCCGCCACGACCCACTGGGTAAGGCGGCCGGGC < 41bp 0.486036894850302 0.732867333204758 0.18273577 0.17878494 prediction 0.465734666409515 Functional Gain - HHEX ENSG00000152804 CDS Human protein_coding chr10:94450099 chr10:94450100 synonymous SNV . 0 22 hm5C_associated_SNPs_113971 0 0 5 GRWD1 POSTAR2 ENCODE chr10:94450063-94450204
64251 chrX 153001826 153001826 1 + C A STAD 153001825 + 153001805 153001845 41 GAGCTGGCTGGCTACACAGCCCGGGTGCACGAGATGTTCCA GAGCTGGCTGGCTACACAGCCAGGGTGCACGAGATGTTCCA < 41bp 0.468366956479827 0.732863300582014 0.6394048 0.8987752 prediction 0.465726601164028 Functional Gain - ABCD1 ENSG00000101986 CDS Human protein_coding chrX:153001825 chrX:153001826 synonymous SNV . 0 22 hm5C_associated_SNPs_113974 0 0 1 PPIG POSTAR2 ENCODE chrX:153001801-153001831
64251 chr11 60699312 60699312 1 + C T HNSC 60699311 + 60699291 60699331 41 GACAAAATGGTGTGGGAAATCCTGGTGTCTGAGCGGGACAT GACAAAATGGTGTGGGAAATCTTGGTGTCTGAGCGGGACAT < 41bp 0.516871803591721 0.749735030945246 0.831572 0.7787577 prediction 0.465726454707049 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60699311 chr11:60699312 synonymous SNV . 0 22 hm5C_associated_SNPs_113975 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:60699302-60699323
64251 chr19 49843549 49843549 1 - G T SKCM 49843550 - 49843530 49843570 41 GAGCCGGTTGTAGACGTGGTCCAGGTTTCTGCACAGGAATA GAGCCGGTTGTAGACGTGGTCAAGGTTTCTGCACAGGAATA < 41bp 0.482861976605133 0.732863103116927 0.22708875 0.41183567 prediction 0.465726206233855 Functional Gain - CD37 ENSG00000104894 CDS Human protein_coding chr19:49843550 chr19:49843549 synonymous SNV . 0 22 hm5C_associated_SNPs_113976 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49843505-49843575
64251 chr17 18702239 18702239 1 + T A CHOL 18702235 + 18702215 18702255 41 TTTGCTTTTAGTGCACTCTTCTCCTTCAGAGTAAAGTGGTT TTTGCTTTTAGTGCACTCTTCTCCATCAGAGTAAAGTGGTT < 41bp 0.379095977833188 0.732861457222409 0.23127592 0.9766594 prediction 0.465722914444818 Functional Gain - TVP23B ENSG00000171928 CDS Human protein_coding chr17:18702235 chr17:18702239 nonsynonymous SNV 0.994 3 25 hm5C_associated_SNPs_113977 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:18702227-18702252
64251 chr1 15755550 15755550 1 + A G rs549820554 15755547 + 15755527 15755567 41 GCTCCTGGCCCTAGGTCCCTCCCAGCCCCATGTGCCTGCCG GCTCCTGGCCCTAGGTCCCTCCCGGCCCCATGTGCCTGCCG < 41bp 0.539288851142814 0.772137694823552 0.3544593 0.18245569 prediction 0.465697687361476 Functional Gain - EFHD2 ENSG00000142634 UTR3 Human protein_coding chr1:15755547 chr1:15755550 . . 0 24 hm5C_associated_SNPs_113980 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:15755519-15755579
64251 chr12 132414487 132414487 1 + C G rs561744467 132414486 + 132414466 132414506 41 CCGGGAACGCGGAGCCGCCGCCCGCCGGAGCCGCATGCCCC CCGGGAACGCGGAGCCGCCGCGCGCCGGAGCCGCATGCCCC < 41bp 0.627075815627446 0.859924604227811 0.08667478 0.21191067 prediction 0.465697577200731 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132414486 chr12:132414487 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_113981 0 0 6 DDX3X POSTAR2 ENCODE chr12:132414460-132414498
64251 chr15 90744587 90744587 1 + C G rs7175006 90744586 + 90744566 90744606 41 GCGGGTGAGCTCTGCCCAAGCCGAGGCTGCGGGGCCGGCGC GCGGGTGAGCTCTGCCCAAGCGGAGGCTGCGGGGCCGGCGC < 41bp 0.627983225794086 0.860827077232781 0.86610425 0.92293787 prediction 0.465687702877388 Functional Gain - SEMA4B ENSG00000185033 UTR5 Human protein_coding chr15:90744586 chr15:90744587 . . 0 22 hm5C_associated_SNPs_113984 0 0 2 DDX3X POSTAR2 ENCODE chr15:90744583-90744642
64251 chr17 1674434 1674434 1 + C A rs1804145 1674433 + 1674413 1674453 41 TCCTTGACACGGTCACTGCCCCCCAGAAGAACCTCAAGAGT TCCTTGACACGGTCACTGCCCACCAGAAGAACCTCAAGAGT < 41bp 0.580816455306559 0.813651092247087 0.11034399 0.25363958 prediction 0.465669273881056 Functional Gain - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1674433 chr17:1674434 nonsynonymous SNV 0.078 1 22 hm5C_associated_SNPs_113988 0 0 8 RPS3 POSTAR2 ENCODE chr17:1674414-1674453
64251 chr7 100187638 100187638 1 - G C rs115302684 100187639 - 100187619 100187659 41 TTTCCCCCTCTTCTCTTCAACCCCAAGCTCCGAGCCACAAG TTTCCCCCTCTTCTCTTCAACGCCAAGCTCCGAGCCACAAG < 41bp 0.406076066251065 0.732834214394692 0.068953514 0.54268205 prediction 0.465668428789383 Functional Gain - FBXO24 ENSG00000106336 CDS Human protein_coding chr7:100187639 chr7:100187638 synonymous SNV . 0 22 hm5C_associated_SNPs_113989 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr7:100187632-100187672
64251 chr9 132396539 132396539 1 + C T SKCM 132396538 + 132396518 132396558 41 TTGTGGGCTCCAGGACTTCACCCCGGAGCCGGACTCTTACG TTGTGGGCTCCAGGACTTCACTCCGGAGCCGGACTCTTACG < 41bp 0.567828986156482 0.800648590944241 0.1669746 0.18254948 prediction 0.465639209575517 Functional Gain - NTMT1 ENSG00000148335 CDS Human protein_coding chr9:132396538 chr9:132396539 synonymous SNV . 0 22 hm5C_associated_SNPs_113995 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:132396516-132396550
64251 chr11 34152954 34152954 1 + C T SKCM 34152953 + 34152933 34152973 41 ACACTGTATGAGGTTTCCCTCCAGGAGTCAATCCGATACGC ACACTGTATGAGGTTTCCCTCTAGGAGTCAATCCGATACGC < 41bp 0.556718894620592 0.789525364685486 0.57865953 0.4259013 prediction 0.465612940129788 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34152953 chr11:34152954 stopgain 0.979 1 22 hm5C_associated_SNPs_114001 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:34152928-34152957
64251 chr12 122252609 122252609 1 + C T UCEC 122252608 + 122252588 122252628 41 CTGAGCAACTCCGGCCCAGGCCGCGGGCAGCACTGGCCACC CTGAGCAACTCCGGCCCAGGCTGCGGGCAGCACTGGCCACC < 41bp 0.489356578827399 0.732805357780492 0.12620705 0.11241248 prediction 0.465610715560985 Functional Gain - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122252608 chr12:122252609 nonsynonymous SNV 0.824 2 22 hm5C_associated_SNPs_114002 0 0 2 RBM15 POSTAR2 ENCODE chr12:122252520-122252633
64251 chr2 29165216 29165216 1 + T C UCEC 29165214 + 29165194 29165234 41 AGACAAAGGGAGCAACTTCCCCTGGACAGAAGGCAAAGTTG AGACAAAGGGAGCAACTTCCCCCGGACAGAAGGCAAAGTTG < 41bp 0.459633817927751 0.732788869808373 0.044115603 0.046497494 prediction 0.465577739616747 Functional Gain - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29165214 chr2:29165216 synonymous SNV . 0 23 hm5C_associated_SNPs_114008 0 0 21 NOP58 POSTAR2 GSE43666,GSM1067861 chr2:29165184-29165228
64251 chr5 6751226 6751226 1 + C T UCEC 6751225 + 6751205 6751245 41 AGCGCCAGCTCCTCTCATGGCCGGCTTACCCACCGCCTTGC AGCGCCAGCTCCTCTCATGGCTGGCTTACCCACCGCCTTGC < 41bp 0.553330833652061 0.78611804978938 0.42157587 0.3857935 prediction 0.465574432274639 Functional Gain - PAPD7 ENSG00000112941 CDS Human protein_coding chr5:6751225 chr5:6751226 synonymous SNV . 0 22 hm5C_associated_SNPs_114010 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:6751212-6751239
64251 chr16 67913012 67913012 1 + C A BRCA 67913011 + 67912991 67913031 41 GCACACTGAGGTGCTGCCTGCCGAAGAGGAAAATGACAGCC GCACACTGAGGTGCTGCCTGCAGAAGAGGAAAATGACAGCC < 41bp 0.469807350962158 0.732780242821157 0.17859909 0.29976144 prediction 0.465560485642313 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913011 chr16:67913012 synonymous SNV . 0 22 hm5C_associated_SNPs_114014 0 0 4 FMR1 POSTAR2 ENCODE chr16:67912979-67913014
64251 chr22 42271656 42271656 1 + A G SKCM 42271653 + 42271633 42271673 41 ATGTCCCCCCCAGCCTCTGACTCAGGGTCCCAGGCTGGCTT ATGTCCCCCCCAGCCTCTGACTCGGGGTCCCAGGCTGGCTT < 41bp 0.4894235834098 0.732758611210281 0.08766729 0.46079838 prediction 0.465517222420562 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42271653 chr22:42271656 synonymous SNV . 0 24 hm5C_associated_SNPs_114018 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr22:42271620-42271657
64251 chr20 48807975 48807975 1 + C A rs567597123 48807974 + 48807954 48807994 41 CAAGAACTGCAAGAAGCCGGCCGAGTACGGCTACGTGAGCC CAAGAACTGCAAGAAGCCGGCAGAGTACGGCTACGTGAGCC < 41bp 0.54970292650866 0.782458573698277 0.7233989 0.77138984 prediction 0.465511294379233 Functional Gain - CEBPB ENSG00000172216 CDS Human protein_coding chr20:48807974 chr20:48807975 synonymous SNV . 0 22 hm5C_associated_SNPs_114019 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:48807960-48808000
64251 chr2 20647495 20647495 1 + A G BLCA 20647492 + 20647472 20647512 41 GTGCTTCTCGGTGGACAGCCCGGACTCGCTGGAGAACATCC GTGCTTCTCGGTGGACAGCCCGGGCTCGCTGGAGAACATCC < 41bp 0.503570166407586 0.736310622251084 0.08661783 0.56879365 prediction 0.465480911686996 Functional Gain - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647492 chr2:20647495 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_114026 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:20647425-20647519
64251 chr14 64916293 64916293 1 + A G LIHC 64916290 + 64916270 64916310 41 TAGCCCTGGCTCAGGCCGTCCAGAGAGCAGCACAAGCACCC TAGCCCTGGCTCAGGCCGTCCAGGGAGCAGCACAAGCACCC < 41bp 0.527087859313765 0.759820013457359 0.3204342 0.6536444 prediction 0.465464308287188 Functional Gain - MTHFD1;ZBTB25 ENSG00000089775;ENSG00000100714 CDS Human other chr14:64916290 chr14:64916293 nonsynonymous SNV 0.955 2 24 hm5C_associated_SNPs_114028 0 0 4 FMR1 POSTAR2 ENCODE chr14:64916250-64916304
64251 chrX 129505549 129505549 1 + T C UCEC 129505547 + 129505527 129505567 41 CTTTCCTGCAGATGTGGAAACATGAGGGCTTTTTTGCACTC CTTTCCTGCAGATGTGGAAACACGAGGGCTTTTTTGCACTC < 41bp 0.587093891864759 0.819821195834731 0.34470955 0.36070243 prediction 0.465454607939943 Functional Gain - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129505547 chrX:129505549 synonymous SNV . 0 23 hm5C_associated_SNPs_114029 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chrX:129505543-129505574
64251 chr1 151278738 151278738 1 - G A SKCM 151278739 - 151278719 151278759 41 CCGAATTCGGAGTACGAGGTCCGTAGAAAACTTGCCCGAAT CCGAATTCGGAGTACGAGGTCTGTAGAAAACTTGCCCGAAT < 41bp 0.46902753987112 0.73272373195381 0.7647884 0.49432173 prediction 0.46544746390762 Functional Gain - PI4KB ENSG00000143393 CDS Human protein_coding chr1:151278739 chr1:151278738 synonymous SNV . 0 22 hm5C_associated_SNPs_114033 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:151278706-151278744
64251 chr1 160322763 160322763 1 + A G rs2296270 160322760 + 160322740 160322780 41 GTGCAGTTAGAGAATGTTGACTCATTTGTGGAGCTGGGACA GTGCAGTTAGAGAATGTTGACTCGTTTGTGGAGCTGGGACA < 41bp 0.508827596137842 0.741551115230839 0.10645059 0.1472789 prediction 0.465447038185994 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160322760 chr1:160322763 synonymous SNV . 0 24 hm5C_associated_SNPs_114034 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:160322734-160322772
64251 chr6 44413592 44413592 1 + C T SKCM 44413591 + 44413571 44413611 41 ACATGAAGATTCTGCTATTCCCCGGAGGCTAGAGGTAACGT ACATGAAGATTCTGCTATTCCTCGGAGGCTAGAGGTAACGT < 41bp 0.481663681398253 0.732717793115488 0.026281953 0.05056694 prediction 0.465435586230977 Functional Gain - CDC5L ENSG00000096401 CDS Human protein_coding chr6:44413591 chr6:44413592 synonymous SNV . 0 22 hm5C_associated_SNPs_114039 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:44413578-44413604
64251 chr2 128952716 128952716 1 + C G rs185156278 128952715 + 128952695 128952735 41 GGCCAAGGCAGGCGGATCACCCGAGGTCAGGAGTTTGAGGA GGCCAAGGCAGGCGGATCACCGGAGGTCAGGAGTTTGAGGA < 41bp 0.500534119599797 0.733243379227601 0.90508235 0.90912974 prediction 0.465418519255608 Functional Gain - UGGT1 ENSG00000136731 UTR3 Human protein_coding chr2:128952715 chr2:128952716 . . 0 22 hm5C_associated_SNPs_114045 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:128952706-128952744
64251 chr8 75928886 75928886 1 + C T OV 75928885 + 75928865 75928905 41 CAAGTCCATGACACCCATGTCCGGACAAGATCAGATGATAG CAAGTCCATGACACCCATGTCTGGACAAGATCAGATGATAG < 41bp 0.55339729550861 0.786106440918863 0.2931292 0.21737915 prediction 0.465418290820506 Functional Gain - CRISPLD1 ENSG00000121005 CDS Human protein_coding chr8:75928885 chr8:75928886 nonsynonymous SNV 0.169 1 22 hm5C_associated_SNPs_114046 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:75928880-75928909
64251 chr19 50358105 50358105 1 + C T LUSC 50358104 + 50358084 50358124 41 ATAGGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAG ATAGGGAGACCGACCAGTGGCTGCAGAAGCTGATCATGCAG < 41bp 0.548992019274394 0.781699783794183 0.24850264 0.7163134 prediction 0.465415529039577 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50358104 chr19:50358105 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_114047 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:50358091-50358121
64251 chr1 24859642 24859642 1 + A G SKCM 24859639 + 24859619 24859659 41 CCCAGCCTGTCAAGCAGTTCCTCATCTCCCCTCCAGCCTCT CCCAGCCTGTCAAGCAGTTCCTCGTCTCCCCTCCAGCCTCT < 41bp 0.521762697532394 0.754462054176729 0.013006449 0.005721867 prediction 0.465398713288669 Functional Gain - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24859639 chr1:24859642 nonsynonymous SNV 0.990 2 24 hm5C_associated_SNPs_114051 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:24859632-24859679
64251 chr7 99947441 99947441 1 + A G rs60920305 99947438 + 99947418 99947458 41 GCAGAGGCGGATTTCCCTGACTGAAGACCATGTTGCAGGCC GCAGAGGCGGATTTCCCTGACTGGAGACCATGTTGCAGGCC < 41bp 0.506336903471939 0.739027388012759 0.22729799 0.28449014 prediction 0.465380969081639 Functional Gain - STAG3L5P-PVRIG2P-PILRB ENSG00000242294;ENSG00000272752 ncRNA_exonic Human other chr7:99947438 chr7:99947441 . . 0 24 hm5C_associated_SNPs_114052 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:99947343-99947486
64251 chr9 133491847 133491847 1 + C A UCEC 133491846 + 133491826 133491866 41 AATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGG AATCCAGGAGATTCTCATTCCAGCATCTAAAGTGGGTCTGG < 41bp 0.567114467455928 0.799803679441608 0.11593783 0.16636208 prediction 0.46537842397136 Functional Gain - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133491846 chr9:133491847 synonymous SNV . 0 22 hm5C_associated_SNPs_114053 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:133491811-133491867
64251 chr6 43029218 43029218 1 + C T SKCM 43029217 + 43029197 43029237 41 GCCGTGCTGCAAAGCCTGTCCCAGACCATTGAGTGTCTGCA GCCGTGCTGCAAAGCCTGTCCTAGACCATTGAGTGTCTGCA < 41bp 0.481535285826144 0.732685266401291 0.15485832 0.07280162 prediction 0.465370532802581 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43029217 chr6:43029218 stopgain 0.995 0 22 hm5C_associated_SNPs_114056 0 0 1 SRSF9 POSTAR2 ENCODE chr6:43029174-43029288
64251 chr19 17452041 17452041 1 + C A COAD 17452040 + 17452020 17452060 41 CGGAGGGCCCAGGTCCCGGTCCTGACCTGCCCCCGCACCTG CGGAGGGCCCAGGTCCCGGTCATGACCTGCCCCCGCACCTG < 41bp 0.476993924828031 0.732681214612884 0.19239536 0.3420095 prediction 0.465362429225768 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452040 chr19:17452041 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_114058 0 0 2 DDX6 POSTAR2 ENCODE chr19:17452009-17452060
64251 chr2 99193585 99193585 1 + A G LAML 99193582 + 99193562 99193602 41 CATGGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCATGC CATGGCCCCGCAGGTCTTCACCCGGGCCCTGGAGTGCATGC < 41bp 0.517979374631734 0.750660231064612 0.5565166 0.90617764 prediction 0.465361712865756 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99193582 chr2:99193585 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_114059 0 0 3 GRWD1 POSTAR2 ENCODE chr2:99193451-99193632
64251 chr12 85677430 85677430 1 + C A LUAD 85677429 + 85677409 85677449 41 ATGGACAACTGTAACAGTCTCCGAATGTCTCCCGTGAAAGG ATGGACAACTGTAACAGTCTCAGAATGTCTCCCGTGAAAGG < 41bp 0.571561723135523 0.804238334254757 0.43991202 0.8004968 prediction 0.465353222238469 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85677429 chr12:85677430 synonymous SNV . 0 22 hm5C_associated_SNPs_114061 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:85677390-85677440
64251 chr7 142962100 142962100 1 + T C SKCM 142962098 + 142962078 142962118 41 CCCACAGGAAGTTTGTCTGCCATGCGTTTCCTCACCGCCGT CCCACAGGAAGTTTGTCTGCCACGCGTTTCCTCACCGCCGT < 41bp 0.470011444771453 0.732665833833725 0.26888192 0.24771339 prediction 0.46533166766745 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142962098 chr7:142962100 nonsynonymous SNV 0.960 3 23 hm5C_associated_SNPs_114065 0 0 10 TARDBP POSTAR2 DRA001158,DRS012387 chr7:142962085-142962110
64251 chr17 4058013 4058013 1 + C T UCEC 4058012 + 4057992 4058032 41 GAGAGGATGGGCTGCCCACCCCGGCACTGACCCAGGTAGAA GAGAGGATGGGCTGCCCACCCTGGCACTGACCCAGGTAGAA < 41bp 0.521720900172667 0.754381604727037 0.4710014 0.35107487 prediction 0.46532140910874 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4058012 chr17:4058013 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_114066 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4057985-4058014
64251 chr19 5047517 5047517 1 + C T TGCT 5047516 + 5047496 5047536 41 CAGTGGAACATCGGGAGCCTCCGGACCATCCTGGACATGGT CAGTGGAACATCGGGAGCCTCTGGACCATCCTGGACATGGT < 41bp 0.560674898996679 0.793330709559135 0.4614764 0.40908834 prediction 0.465311621124911 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5047516 chr19:5047517 nonsynonymous SNV 0.358 2 22 hm5C_associated_SNPs_114070 0 0 5 FMR1 POSTAR2 ENCODE chr19:5047485-5047564
64251 chr11 66611449 66611449 1 + T C STAD 66611447 + 66611427 66611467 41 CCAGGCACATCCCTGCTCACCCTGATGGGCTTCAGGCTGGA CCAGGCACATCCCTGCTCACCCCGATGGGCTTCAGGCTGGA < 41bp 0.454289163585882 0.732650292829638 0.06173587 0.06069529 prediction 0.465300585659277 Functional Gain - RCE1 ENSG00000173653 CDS Human protein_coding chr11:66611447 chr11:66611449 stoploss 1.000 4 23 hm5C_associated_SNPs_114071 0 0 3 BUD13 POSTAR2 ENCODE chr11:66611407-66611479
64251 chr2 63175836 63175836 1 + C T LUAD 63175835 + 63175815 63175855 41 ACTAAAAGTGACACAGAACCCCAGAAGTCTCAGCAGAGCTC ACTAAAAGTGACACAGAACCCTAGAAGTCTCAGCAGAGCTC < 41bp 0.545063119819375 0.777702677707572 0.17203206 0.15393034 prediction 0.465279115776395 Functional Gain - EHBP1 ENSG00000115504 CDS Human protein_coding chr2:63175835 chr2:63175836 stopgain 1.000 1 22 hm5C_associated_SNPs_114075 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:63175822-63175886
64251 chr1 110038714 110038714 1 + C T COAD 110038713 + 110038693 110038733 41 ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGT ACATGTGGACTGGTGGTCTACTTGATGGCTACAGTAACGGT < 41bp 0.491776205205169 0.732621409341797 0.10036686 0.12660182 prediction 0.465242818683595 Functional Gain - CYB561D1 ENSG00000174151 CDS Human protein_coding chr1:110038713 chr1:110038714 synonymous SNV . 0 22 hm5C_associated_SNPs_114079 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:110038693-110038714
64251 chr19 58198820 58198820 1 + T G CESC 58198817 + 58198797 58198837 41 ACTCTGGAGAAAGGCCTTATCAGTGCTGTGAGTGTGGGAAA ACTCTGGAGAAAGGCCTTATCAGGGCTGTGAGTGTGGGAAA < 41bp 0.695576950270128 0.928196178803305 0.37269652 0.9291744 prediction 0.465238457066355 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198817 chr19:58198820 nonsynonymous SNV 0.009 3 24 hm5C_associated_SNPs_114081 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58198791-58198841
64251 chr19 36034642 36034642 1 - G T SARC 36034646 - 36034626 36034666 41 CTTGATGGCTGAGTAGGGGGCAGGCTGGGCGAGGCGGCAGG CTTGATGGCTGAGTAGGGGGCAGGATGGGCGAGGCGGCAGG < 41bp 0.681725653274883 0.914343351490877 0.89274585 0.8947191 prediction 0.465235396431988 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36034646 chr19:36034642 nonsynonymous SNV 0.043 1 25 hm5C_associated_SNPs_114082 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:36034609-36034663
64251 chr5 81606007 81606007 1 + C T SKCM 81606006 + 81605986 81606026 41 AAGCTTGGTGATGCTGGAAACCCCAGAAGTCTTGCTATAAG AAGCTTGGTGATGCTGGAAACTCCAGAAGTCTTGCTATAAG < 41bp 0.583639106983677 0.816243877398763 0.20214194 0.9563415 prediction 0.465209540830172 Functional Gain - ATP6AP1L ENSG00000205464 CDS Human protein_coding chr5:81606006 chr5:81606007 nonsynonymous SNV 0.940 0 22 hm5C_associated_SNPs_114089 0 0 1 TIA1 POSTAR2 ENCODE chr5:81605922-81606016
64251 chr5 135391458 135391458 1 + C T SKCM 135391457 + 135391437 135391477 41 GATGGACCGGGTGCTGACCCCCCCAATGGGGACTGTCATGG GATGGACCGGGTGCTGACCCCTCCAATGGGGACTGTCATGG < 41bp 0.61126249794434 0.843864173964502 0.032322586 0.96592367 prediction 0.465203352040325 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135391457 chr5:135391458 synonymous SNV . 0 22 hm5C_associated_SNPs_114091 0 0 6 LARP4 POSTAR2 ENCODE chr5:135391442-135391467
64251 chr16 3339612 3339612 1 + C T UCEC 3339611 + 3339591 3339631 41 GTGGCAGAGAACTGGGGCGACCGAAGGAACTGCAGCCAAAG GTGGCAGAGAACTGGGGCGACTGAAGGAACTGCAGCCAAAG < 41bp 0.517757791055321 0.750350454801395 0.89503866 0.9030937 prediction 0.465185327492148 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339611 chr16:3339612 stopgain 0.007 0 22 hm5C_associated_SNPs_114094 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr16:3339598-3339623
64251 chr5 149915370 149915370 1 + C T PRAD 149915369 + 149915349 149915389 41 TGGAAGCAGGTGTGGAGCATCCGCGTGACCAGCACGGAGGA TGGAAGCAGGTGTGGAGCATCTGCGTGACCAGCACGGAGGA < 41bp 0.567073500416137 0.799648706899512 0.5502982 0.36639848 prediction 0.465150412966751 Functional Gain - NDST1 ENSG00000070614 CDS Human protein_coding chr5:149915369 chr5:149915370 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_114102 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:149915340-149915380
64251 chr16 720920 720920 1 + C T COAD 720919 + 720899 720939 41 GCTTTGGGCACCCCCTGGCCCCGCAGGCCCTGGAGGACGTG GCTTTGGGCACCCCCTGGCCCTGCAGGCCCTGGAGGACGTG < 41bp 0.565250842257433 0.79782226631164 0.045164734 0.0653747 prediction 0.465142848108415 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:720919 chr16:720920 nonsynonymous SNV 0.724 3 22 hm5C_associated_SNPs_114105 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:720892-720942
64251 chr19 10394323 10394323 1 + C T UCEC 10394322 + 10394302 10394342 41 GGAGCCAGCTGTGGGGGAGCCCGCTGAGGTCACGACCACGG GGAGCCAGCTGTGGGGGAGCCTGCTGAGGTCACGACCACGG < 41bp 0.51422527201728 0.746784770328208 0.817155 0.8494334 prediction 0.465118996621856 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394322 chr19:10394323 synonymous SNV . 0 22 hm5C_associated_SNPs_114109 0 0 6 NOL12 POSTAR2 ENCODE chr19:10394224-10394345
64251 chr22 46719100 46719100 1 + C G rs6008684 46719096 + 46719076 46719116 41 CTTGGACTTAGGTGACTCCCCGGACAGCTCAACACCAAAGC CTTGGACTTAGGTGACTCCCCGGAGAGCTCAACACCAAAGC < 41bp 0.423063695874494 0.732556140963365 0.46347958 0.8872117 prediction 0.46511228192673 Functional Gain - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46719096 chr22:46719100 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_114113 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:46719066-46719111
64251 chr1 44437123 44437123 1 + C T SKCM 44437122 + 44437102 44437142 41 AGTCTCCAGCCCAGCTTTTCCCCAACCAGTGGGTTCCCTGA AGTCTCCAGCCCAGCTTTTCCTCAACCAGTGGGTTCCCTGA < 41bp 0.566624100031318 0.799176698826662 0.028038591 0.1309138 prediction 0.465105197590688 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437122 chr1:44437123 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_114115 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:44437123-44437124
64251 chr22 30415899 30415899 1 + A G LIHC 30415896 + 30415876 30415916 41 CAGAACTGGGTGATGCTGCTCTGAGGAGCCATCTGGATATG CAGAACTGGGTGATGCTGCTCTGGGGAGCCATCTGGATATG < 41bp 0.542177522107437 0.774728529548125 0.16223451 0.73897755 prediction 0.465102014881377 Functional Gain - MTMR3 ENSG00000100330 CDS Human protein_coding chr22:30415896 chr22:30415899 nonsynonymous SNV 0.004 2 24 hm5C_associated_SNPs_114117 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr22:30415878-30415901
64251 chr19 41263270 41263270 1 + A G STAD 41263267 + 41263247 41263287 41 GTCCCTGTACGCCATCTTCTCCCAGTTTGGCCAGATCCTGG GTCCCTGTACGCCATCTTCTCCCGGTTTGGCCAGATCCTGG < 41bp 0.531902553875107 0.764445543266246 0.034348905 0.23748818 prediction 0.465085978782277 Functional Gain - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41263267 chr19:41263270 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_114122 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41263247-41263270
64251 chr20 54967460 54967460 1 + C G rs34579616 54967456 + 54967436 54967476 41 GAAGTGGTGGAGCCAACGGCCAGCCAGACCTGTGGCAGTCC GAAGTGGTGGAGCCAACGGCCAGCGAGACCTGTGGCAGTCC < 41bp 0.618377179146018 0.850917922202727 0.2872545 0.51638955 prediction 0.465081486113416 Functional Gain - CSTF1 ENSG00000101138 UTR5 Human protein_coding chr20:54967456 chr20:54967460 . . 0 25 hm5C_associated_SNPs_114123 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr20:54967459-54967460
64251 chr5 141309600 141309600 1 + C T UCEC 141309599 + 141309579 141309619 41 TGCCAGTAGTAGCATCGAGTCCGAGGCAAAACCAGCCCAGC TGCCAGTAGTAGCATCGAGTCTGAGGCAAAACCAGCCCAGC < 41bp 0.51612182601697 0.748661358287152 0.36485428 0.29185832 prediction 0.465079064540364 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141309599 chr5:141309600 synonymous SNV . 0 22 hm5C_associated_SNPs_114124 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:141309571-141309609
64251 chr16 85667566 85667566 1 + C T rs375816658 85667565 + 85667545 85667585 41 TTCGCTAGGGATGCTTTCCACCGCGACCAGGACCACCGCCA TTCGCTAGGGATGCTTTCCACTGCGACCAGGACCACCGCCA < 41bp 0.488594235149043 0.732538130710429 0.17563376 0.18559575 prediction 0.465076261420857 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85667565 chr16:85667566 synonymous SNV . 0 22 hm5C_associated_SNPs_114125 0 0 6 IGF2BP2 POSTAR2 ENCODE chr16:85667522-85667729
64251 chr6 86201863 86201863 1 + T A LUSC 86201859 + 86201839 86201879 41 CCAATGGTGGAGATGGGTTCCAGATGATAAAAGATGAATTA CCAATGGTGGAGATGGGTTCCAGAAGATAAAAGATGAATTA < 41bp 0.415354977335737 0.732534197431648 0.48050064 0.82396555 prediction 0.465068394863295 Functional Gain - NT5E ENSG00000135318 CDS Human protein_coding chr6:86201859 chr6:86201863 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_114126 0 0 1 SND1 POSTAR2 ENCODE chr6:86201827-86201864
64251 chr17 7479876 7479876 1 + T C UCEC 7479874 + 7479854 7479894 41 GTCATGGCACTAGGAGACTACATGGGCGCCTCCTGTCACGC GTCATGGCACTAGGAGACTACACGGGCGCCTCCTGTCACGC < 41bp 0.599606300343266 0.832138857648383 0.8238634 0.9161122 prediction 0.465065114610233 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7479874 chr17:7479876 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_114127 0 0 49 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:7479840-7479900
64251 chr20 54972519 54972519 1 + C T SKCM 54972518 + 54972498 54972538 41 TGACACAGAGAGGATGTTGGCCAAAAGTGCCATGCCAATAG TGACACAGAGAGGATGTTGGCTAAAAGTGCCATGCCAATAG < 41bp 0.547830060828537 0.780361422192208 0.2284382 0.31541634 prediction 0.465062722727343 Functional Gain - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54972518 chr20:54972519 synonymous SNV . 0 22 hm5C_associated_SNPs_114128 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr20:54972489-54972519
64251 chr7 93540228 93540228 1 + T C STAD 93540226 + 93540206 93540246 41 CAAAGGAGGCTGTGTGATTTCATAATACAAACAAAAAGAAA CAAAGGAGGCTGTGTGATTTCACAATACAAACAAAAAGAAA < 41bp 0.481648313023301 0.732528861645437 0.2814174 0.23501658 prediction 0.465057723290873 Functional Gain - GNGT1 ENSG00000127928 CDS Human protein_coding chr7:93540226 chr7:93540228 stoploss 0.063 0 23 hm5C_associated_SNPs_114129 0 0 2 FUS POSTAR2 SRX029328 chr7:93540221-93540243
64251 chr12 121435337 121435337 1 + C G KIRC 121435333 + 121435313 121435353 41 TCAACAGCATGGGCAGCAGCCTGACCACCCTGCAGCCCGTC TCAACAGCATGGGCAGCAGCCTGAGCACCCTGCAGCCCGTC < 41bp 0.42560276697977 0.732524698320979 0.059392035 0.20098165 prediction 0.465049396641958 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121435333 chr12:121435337 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_114130 0 0 2 IGF2BP1 POSTAR2 ENCODE chr12:121435337-121435432
64251 chr20 44424050 44424050 1 + A G KIRP 44424047 + 44424027 44424067 41 AGGAGGTGGACGCAGAGCAGCTGATCCAGGAAGCCTGTCGG AGGAGGTGGACGCAGAGCAGCTGGTCCAGGAAGCCTGTCGG < 41bp 0.489029448175469 0.732516413203755 0.9029998 0.8064501 prediction 0.465032826407511 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44424047 chr20:44424050 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_114132 0 0 2 PPIG POSTAR2 ENCODE chr20:44424019-44424084
64251 chr17 41006663 41006663 1 + C G LUAD 41006662 + 41006642 41006682 41 ACAGCAACAAGTGGGGTCACCCCCGGGGCTACCGCATCCAG ACAGCAACAAGTGGGGTCACCGCCGGGGCTACCGCATCCAG < 41bp 0.645689469946286 0.878201405607617 0.2811907 0.30738208 prediction 0.465023871322663 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41006662 chr17:41006663 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_114133 0 0 1 PPIG POSTAR2 ENCODE chr17:41006653-41006751
64251 chr3 23996175 23996175 1 + C T SKCM 23996174 + 23996154 23996194 41 ATTCTGATACCAATGGTAATCCCAAGAATGGTGATCTCGCC ATTCTGATACCAATGGTAATCTCAAGAATGGTGATCTCGCC < 41bp 0.559583644555485 0.792091935057633 0.26762557 0.35326767 prediction 0.465016581004297 Functional Gain - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:23996174 chr3:23996175 nonsynonymous SNV 0.750 2 22 hm5C_associated_SNPs_114134 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr3:23996143-23996197
64251 chr19 45165912 45165912 1 + C A rs714948 45165908 + 45165888 45165928 41 CCACCCAGAGTGGCCCAAGACTCCCAGATCAGCTACCAGGC CCACCCAGAGTGGCCCAAGACTCCAAGATCAGCTACCAGGC < 41bp 0.306260297815597 0.732503224323166 0.036412865 0.95109135 prediction 0.465006448646332 Functional Gain - PVR ENSG00000266903 ncRNA_intronic Human antisense chr19:45165908 chr19:45165912 . . 0 25 hm5C_associated_SNPs_114135 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:45165895-45165931
64251 chr12 34175604 34175604 1 + T G UCEC 34175601 + 34175581 34175621 41 CCTTTTTAGTATCCTGCCTCCTCTTCTCCGCCTTCAGCCGG CCTTTTTAGTATCCTGCCTCCTCGTCTCCGCCTTCAGCCGG < 41bp 0.360470605148454 0.732501466032624 0.051198572 0.07248172 prediction 0.465002932065248 Functional Gain - ALG10 ENSG00000139133 CDS Human protein_coding chr12:34175601 chr12:34175604 nonsynonymous SNV 0.928 2 24 hm5C_associated_SNPs_114137 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:34175589-34175617
64251 chr12 122492863 122492863 1 + C T GBM 122492862 + 122492842 122492882 41 TCGAGGTCTCAGAGGGGCAGCCAGATCGGCCGGGAGCCCAT TCGAGGTCTCAGAGGGGCAGCTAGATCGGCCGGGAGCCCAT < 41bp 0.547311416558152 0.779804567029769 0.4664117 0.37784997 prediction 0.464986300943234 Functional Gain - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122492862 chr12:122492863 stopgain 0.017 0 22 hm5C_associated_SNPs_114144 0 0 1 PRPF8 POSTAR2 ENCODE chr12:122492821-122492875
64251 chr21 44323719 44323719 1 + C T SKCM 44323718 + 44323698 44323738 41 TTCCTTTGAAAACAGAGCCCCCCGAGTTACAGTATCAGCAA TTCCTTTGAAAACAGAGCCCCTCGAGTTACAGTATCAGCAA < 41bp 0.559905655411638 0.792396882338616 0.019143641 0.14738664 prediction 0.464982453853956 Functional Gain - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44323718 chr21:44323719 synonymous SNV . 0 22 hm5C_associated_SNPs_114145 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr21:44323705-44323734
64251 chr19 15760797 15760797 1 + T A LUAD 15760793 + 15760773 15760813 41 CAAAAAGACACCAGCAGATCCTCCTGTACATAGACTTCCTG CAAAAAGACACCAGCAGATCCTCCAGTACATAGACTTCCTG < 41bp 0.379922752789882 0.732480098116759 0.05300653 0.94543433 prediction 0.464960196233517 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15760793 chr19:15760797 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_114149 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:15760789-15760813
64251 chr14 65511143 65511143 1 + C T UCEC 65511142 + 65511122 65511162 41 GGGCTCCTGCCCCTGCTCCACCGCGCACTGCACGCCCAAGG GGGCTCCTGCCCCTGCTCCACTGCGCACTGCACGCCCAAGG < 41bp 0.484408807532705 0.732479344706606 0.11546007 0.16919404 prediction 0.464958689413211 Functional Gain - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65511142 chr14:65511143 nonsynonymous SNV 0.883 1 22 hm5C_associated_SNPs_114150 0 0 1 RPS3 POSTAR2 ENCODE chr14:65511104-65511151
64251 chr5 54640370 54640370 1 + A G BLCA 54640367 + 54640347 54640387 41 CAGCCTTGTCATGTTATTTACACAGATTATCGGCCCACTCC CAGCCTTGTCATGTTATTTACACGGATTATCGGCCCACTCC < 41bp 0.502358725668898 0.734827526560353 0.011371821 0.044802547 prediction 0.464937601782909 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54640367 chr5:54640370 synonymous SNV . 0 24 hm5C_associated_SNPs_114156 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:54640356-54640398
64251 chr2 113332700 113332700 1 + C T UCEC 113332699 + 113332679 113332719 41 GATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGC GATGTTAATTGAGAGTATGGCTGGGAAGTCTGCAGCTTTGC < 41bp 0.508104681131476 0.740564080026661 0.39795622 0.33762798 prediction 0.464918797790371 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113332699 chr2:113332700 synonymous SNV . 0 22 hm5C_associated_SNPs_114157 0 0 13 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:113332640-113332700
64251 chr1 27661941 27661941 1 + T A COAD 27661937 + 27661917 27661957 41 GCATCATCCTCACCGTCAGCCTGGTCTTTAACCTCCGGTGA GCATCATCCTCACCGTCAGCCTGGACTTTAACCTCCGGTGA < 41bp 0.63653254820793 0.868982572817483 0.22354212 0.27613395 prediction 0.464900049219105 Functional Gain - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27661937 chr1:27661941 nonsynonymous SNV 0.935 1 25 hm5C_associated_SNPs_114160 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:27661917-27661949
64251 chr11 65164451 65164451 1 + C T UCEC 65164450 + 65164430 65164470 41 GCCGCCCTGGGCACCCACTACCGCGCCTATCTCCTCAAGTG GCCGCCCTGGGCACCCACTACTGCGCCTATCTCCTCAAGTG < 41bp 0.480952892903285 0.732449915387734 0.8004798 0.49747938 prediction 0.464899830775467 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65164450 chr11:65164451 nonsynonymous SNV 0.451 4 22 hm5C_associated_SNPs_114161 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65164445-65164484
64251 chr12 6566732 6566732 1 + C T ESCA 6566731 + 6566711 6566751 41 TCAGTTGGTGTACAGCTGGACCGCAGGGCAGGGGCAGGCTG TCAGTTGGTGTACAGCTGGACTGCAGGGCAGGGGCAGGCTG < 41bp 0.513855936553423 0.746302674321886 0.1784145 0.34878922 prediction 0.464893475536927 Functional Gain - TAPBPL ENSG00000139192 CDS Human protein_coding chr12:6566731 chr12:6566732 synonymous SNV . 0 22 hm5C_associated_SNPs_114163 0 0 1 SND1 POSTAR2 ENCODE chr12:6566622-6566827
64251 chr13 103514654 103514654 1 + C A UCEC 103514653 + 103514633 103514673 41 AGACGAAGGCTCCATATCACCCCGGACTCTTTCAGCCATTA AGACGAAGGCTCCATATCACCACGGACTCTTTCAGCCATTA < 41bp 0.564126176726778 0.79655999794608 0.084361225 0.35062948 prediction 0.464867642438603 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514653 chr13:103514654 synonymous SNV . 0 22 hm5C_associated_SNPs_114165 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:103514641-103514666
64251 chr17 15902994 15902994 1 + C A rs73276077 15902990 + 15902970 15903010 41 CTACCTGTGGAGGATCCTGACCCCCCGCCGGGGCAGGGCGA CTACCTGTGGAGGATCCTGACCCCACGCCGGGGCAGGGCGA < 41bp 0.35007399916191 0.732432754178935 0.08349055 0.2758747 prediction 0.46486550835787 Functional Gain - TTC19;ZSWIM7 ENSG00000011295 CDS Human protein_coding chr17:15902990 chr17:15902994 synonymous SNV . 0 25 hm5C_associated_SNPs_114166 1 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr17:15902968-15902999
64251 chr7 99123897 99123897 1 + C T CESC 99123896 + 99123876 99123916 41 CAGGTGTGCGGAAAGGCTTTCCGGGTGAGTTCCCACCTGGT CAGGTGTGCGGAAAGGCTTTCTGGGTGAGTTCCCACCTGGT < 41bp 0.515065907108393 0.747498090936615 0.9428088 0.93216527 prediction 0.464864367656444 Functional Gain - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123896 chr7:99123897 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_114167 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr7:99123886-99123914
64251 chr12 7044966 7044966 1 + C T rs115226639 7044965 + 7044945 7044985 41 CAGACAGCACCCCTCGACAGCCAGAGGCTAGCTTTGAACCC CAGACAGCACCCCTCGACAGCTAGAGGCTAGCTTTGAACCC < 41bp 0.482469749058217 0.732427448855324 0.89522576 0.15271729 prediction 0.464854897710648 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7044965 chr12:7044966 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_114169 0 0 10 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:7044960-7044980
64251 chr11 63722599 63722599 1 + T C rs183856012 63722597 + 63722577 63722617 41 TGGGAGGAAGACTGCCTCTCCATCGCTGTCAGAGAGCCTGA TGGGAGGAAGACTGCCTCTCCACCGCTGTCAGAGAGCCTGA < 41bp 0.520121704929799 0.752546309924596 0.05611217 0.10421932 prediction 0.464849209989592 Functional Gain - NAA40 ENSG00000110583 UTR3 Human protein_coding chr11:63722597 chr11:63722599 . . 0 23 hm5C_associated_SNPs_114171 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:63722543-63722639
64251 chr17 60501409 60501409 1 + A G rs11543000 60501406 + 60501386 60501426 41 CCCCTTCGCCCGGCCTGTCGCTGACCCTCTGTCCCGCCGCC CCCCTTCGCCCGGCCTGTCGCTGGCCCTCTGTCCCGCCGCC < 41bp 0.492258143364155 0.732422180176513 0.18918318 0.6527511 prediction 0.464844360353026 Functional Gain - METTL2A ENSG00000087995 intronic Human protein_coding chr17:60501406 chr17:60501409 . . 0 24 hm5C_associated_SNPs_114172 0 0 1 PRPF8 POSTAR2 ENCODE chr17:60501364-60501420
64251 chr10 94352938 94352938 1 + T A rs180781687 94352934 + 94352914 94352954 41 GATTAGTGATTTGGCGGCTCCGACTGGCGCGGGACAAACGC GATTAGTGATTTGGCGGCTCCGACAGGCGCGGGACAAACGC < 41bp 0.598463340280796 0.830885134337916 0.29922026 0.600184 prediction 0.464843588114242 Functional Gain - KIF11 ENSG00000138160 upstream Human protein_coding chr10:94352934 chr10:94352938 . . 0 25 hm5C_associated_SNPs_114173 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:94352921-94352942
64251 chr1 203045825 203045825 1 + C G rs543004043 203045821 + 203045801 203045841 41 GCTCAGGGTGGATGTGAAGCCACCCTTCCTCTTCTGGACCC GCTCAGGGTGGATGTGAAGCCACCGTTCCTCTTCTGGACCC < 41bp 0.624679717648997 0.857101486277023 0.025545985 0.08920577 prediction 0.464843537256052 Functional Gain - PPFIA4 ENSG00000143847 UTR3 Human protein_coding chr1:203045821 chr1:203045825 . . 0 25 hm5C_associated_SNPs_114174 0 0 1 LSM11 POSTAR2 ENCODE chr1:203045822-203045866
64251 chr1 203277647 203277647 1 + C A rs561189406 203277646 + 203277626 203277666 41 TGCAATATGCCCCCTGGGTCCCAGGAGGGTCTGGAGGAAAA TGCAATATGCCCCCTGGGTCCAAGGAGGGTCTGGAGGAAAA < 41bp 0.561591111205587 0.793990280893133 0.23492643 0.38606054 prediction 0.464798339375092 Functional Gain - BTG2 ENSG00000159388 UTR3 Human protein_coding chr1:203277646 chr1:203277647 . . 0 22 hm5C_associated_SNPs_114179 0 0 5 DDX6 POSTAR2 ENCODE chr1:203277558-203277650
64251 chr1 28891217 28891217 1 + C A UCEC 28891216 + 28891196 28891236 41 TCTTGTTCTCTCTCCTCAGCCCTGAGTATTCCCTCTTTGTG TCTTGTTCTCTCTCCTCAGCCATGAGTATTCCCTCTTTGTG < 41bp 0.472366938774699 0.73239909910285 0.21634743 0.404135 prediction 0.464798198205699 Functional Gain - TRNAU1AP ENSG00000180098 CDS Human protein_coding chr1:28891216 chr1:28891217 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_114180 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:28891216-28891245
64251 chr2 202050825 202050825 1 + C A THCA 202050821 + 202050801 202050841 41 GAAGTGGAGCGACTGCTGCCCACCCGACAAAGGGTTTCTCT GAAGTGGAGCGACTGCTGCCCACCAGACAAAGGGTTTCTCT < 41bp 0.312914518140003 0.732383619423954 0.04705718 0.04927072 prediction 0.464767238847908 Functional Gain - CASP10 ENSG00000003400 CDS Human protein_coding chr2:202050821 chr2:202050825 synonymous SNV . 0 25 hm5C_associated_SNPs_114184 0 0 4 EFTUD2 POSTAR2 ENCODE chr2:202050801-202050875
64251 chr15 41793920 41793920 1 + A G LUSC 41793917 + 41793897 41793937 41 CTGCCTGGCGCGGCTGATGGCTGACGCGCTGCGCGGCTGCG CTGCCTGGCGCGGCTGATGGCTGGCGCGCTGCGCGGCTGCG < 41bp 0.549093480488795 0.781456166363021 0.6192591 0.8091283 prediction 0.46472537174845 Functional Gain - ITPKA ENSG00000137825 CDS Human protein_coding chr15:41793917 chr15:41793920 nonsynonymous SNV 0.969 4 24 hm5C_associated_SNPs_114187 0 0 2 SF3B1 POSTAR2 ENCODE chr15:41793908-41793931
64251 chr19 49989389 49989389 1 + A G rs141749315 49989386 + 49989366 49989406 41 GGCCCCTCTCATTCCCTCCCCAGAATGGAGGCAACGCCAGA GGCCCCTCTCATTCCCTCCCCAGGATGGAGGCAACGCCAGA < 41bp 0.533917897909109 0.766266848124609 0.20781171 0.3395756 prediction 0.464697900430999 Functional Gain - FLT3LG ENSG00000090554 CDS Human protein_coding chr19:49989386 chr19:49989389 unknown . 0 24 hm5C_associated_SNPs_114192 0 0 1 TBRG4 POSTAR2 ENCODE chr19:49989362-49989401
64251 chr1 233086394 233086394 1 + C G rs79910465 233086390 + 233086370 233086410 41 GTCGCGACCCTGGTCCGGACCTGACCTGAATTGCGACCCCA GTCGCGACCCTGGTCCGGACCTGAGCTGAATTGCGACCCCA < 41bp 0.607742866060116 0.840085817710032 0.20721477 0.5823624 prediction 0.464685903299832 Functional Gain - NTPCR ENSG00000135778 UTR5 Human protein_coding chr1:233086390 chr1:233086394 . . 0 25 hm5C_associated_SNPs_114196 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:233086360-233086400
64251 chr11 118498881 118498881 1 + C T SKCM 118498880 + 118498860 118498900 41 CCTGAGAGTCCCCGCCTGGGCCGGCGGGGCCTGGACAGTAT CCTGAGAGTCCCCGCCTGGGCTGGCGGGGCCTGGACAGTAT < 41bp 0.508227719608585 0.740570451713002 0.44199422 0.26012605 prediction 0.464685464208835 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118498880 chr11:118498881 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_114197 0 0 1 RPS3 POSTAR2 ENCODE chr11:118498849-118498895
64251 chr16 29706122 29706122 1 + C T SKCM 29706121 + 29706101 29706141 41 GCGGCGCTGTGGGCCAAATCCCCTGGGGTACTGGCAGGGCA GCGGCGCTGTGGGCCAAATCCTCTGGGGTACTGGCAGGGCA < 41bp 0.558641396319007 0.790971095714334 0.17912415 0.14538744 prediction 0.464659398790655 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706121 chr16:29706122 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_114203 0 0 13 EIF3G POSTAR2 GSE65004,GSM1585674 chr16:29706097-29706133
64251 chr6 33169579 33169579 1 + C T SKCM 33169578 + 33169558 33169598 41 TTTTTTGTCCTCTTCCTTATCCCCGTGGAGTCGAACTCTCC TTTTTTGTCCTCTTCCTTATCTCCGTGGAGTCGAACTCTCC < 41bp 0.519189867794712 0.751519358736597 0.34085613 0.29703367 prediction 0.464658981883771 Functional Gain - SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33169578 chr6:33169579 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_114204 0 0 18 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:33169542-33169581
64251 chr11 8009241 8009241 1 + C T rs12421289 8009240 + 8009220 8009260 41 GAGACGCAACGAGGGTGCTGCCCGAGTTATCGGGACCCTGT GAGACGCAACGAGGGTGCTGCTCGAGTTATCGGGACCCTGT < 41bp 0.543772779286103 0.776092945761806 0.37330285 0.29792053 prediction 0.464640332951407 Functional Gain - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8009240 chr11:8009241 synonymous SNV . 0 22 hm5C_associated_SNPs_114208 0 0 2 PRPF8 POSTAR2 ENCODE chr11:8009224-8009299
64251 chr1 117639996 117639996 1 + C T rs35053456 117639995 + 117639975 117640015 41 AATGCTAATCTCTCTCTTGGCCGGAGGTGTTGGTCTAAACC AATGCTAATCTCTCTCTTGGCTGGAGGTGTTGGTCTAAACC < 41bp 0.485028462304707 0.732311286009579 0.56905925 0.1676991 prediction 0.464622572019157 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117639995 chr1:117639996 synonymous SNV . 0 22 hm5C_associated_SNPs_114213 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:117639980-117640000
64251 chr3 44694063 44694063 1 + C A CESC 44694062 + 44694042 44694082 41 TCTCTAGGGTCAGAACATATCCTGGGATATGGCGGTAGTCC TCTCTAGGGTCAGAACATATCATGGGATATGGCGGTAGTCC < 41bp 0.470615386062126 0.732301254582081 0.7719226 0.9041296 prediction 0.464602509164162 Functional Gain - ZNF35 ENSG00000169981 CDS Human protein_coding chr3:44694062 chr3:44694063 synonymous SNV . 0 22 hm5C_associated_SNPs_114215 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:44694059-44694089
64251 chr6 28117325 28117325 1 + C A LIHC 28117324 + 28117304 28117344 41 TAGTACATTCAGCATCTGCACCAGAGCCTCCAAATACTCAG TAGTACATTCAGCATCTGCACAAGAGCCTCCAAATACTCAG < 41bp 0.555035366936207 0.7873300169544 0.006057352 0.002978146 prediction 0.464589300036385 Functional Gain - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28117324 chr6:28117325 nonsynonymous SNV 0.776 0 22 hm5C_associated_SNPs_114216 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:28117315-28117344
64251 chr1 26510755 26510755 1 + C T SKCM 26510754 + 26510734 26510774 41 ACCTGTCTTCAAACCCCAGTCCCGGACCCAGCCCTGCCTGG ACCTGTCTTCAAACCCCAGTCTCGGACCCAGCCCTGCCTGG < 41bp 0.547484745644 0.779778932366493 0.3092823 0.15031019 prediction 0.464588373444986 Functional Gain - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26510754 chr1:26510755 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_114217 0 0 2 PPIG POSTAR2 ENCODE chr1:26510732-26510778
64251 chr1 10459136 10459136 1 + C G rs189369210 10459135 + 10459115 10459155 41 GTCTTTCCCTCACTCGTCCTCCGCGCGTCGCCGCTCTTCGG GTCTTTCCCTCACTCGTCCTCGGCGCGTCGCCGCTCTTCGG < 41bp 0.59030115928128 0.822594978834078 0.54090995 0.9348502 prediction 0.464587639105596 Functional Gain - PGD ENSG00000142657 UTR5 Human protein_coding chr1:10459135 chr1:10459136 . . 0 22 hm5C_associated_SNPs_114219 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585670 chr1:10459115-10459137
64251 chr9 140508832 140508832 1 + C A LUSC 140508828 + 140508808 140508848 41 GAGGGTGCGGGCGTCAAGGCCTGGCGGCGGGCGCAGTGGCA GAGGGTGCGGGCGTCAAGGCCTGGAGGCGGGCGCAGTGGCA < 41bp 0.698725145478713 0.931017618286254 0.7371547 0.8053595 prediction 0.464584945615081 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508828 chr9:140508832 synonymous SNV . 0 25 hm5C_associated_SNPs_114220 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:140508801-140508838
64251 chr8 56912010 56912010 1 + A G HNSC 56912007 + 56911987 56912027 41 CCCTATTAAGTGGACGGCTCCAGAAGCAATCAACTTTGGAT CCCTATTAAGTGGACGGCTCCAGGAGCAATCAACTTTGGAT < 41bp 0.499194484390898 0.732289319407957 0.29070914 0.39604828 prediction 0.464578638815915 Functional Gain - LYN ENSG00000254087 CDS Human protein_coding chr8:56912007 chr8:56912010 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_114222 0 0 1 LIN28B POSTAR2 ENCODE chr8:56911975-56912015
64251 chr19 38780811 38780811 1 + C A UCEC 38780807 + 38780787 38780827 41 GCCTTGCCGTGCATCCTTCCCACGCTGGTACTTTGACGTGG GCCTTGCCGTGCATCCTTCCCACGATGGTACTTTGACGTGG < 41bp 0.70457143327557 0.936860459371197 0.067380965 0.08747214 prediction 0.464578052191253 Functional Gain - SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780807 chr19:38780811 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_114223 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:38780780-38780820
64251 chr15 32962529 32962529 1 + C A rs370809963 32962525 + 32962505 32962545 41 GGGCAGTCCCTGTGAGGGACCAGGCTCGAATTCAGAGCAGA GGGCAGTCCCTGTGAGGGACCAGGATCGAATTCAGAGCAGA < 41bp 0.386160508092404 0.732278722709129 0.26704654 0.21667966 prediction 0.464557445418257 Functional Gain - LOC105370757 ENSG00000241818 ncRNA_intronic Human antisense chr15:32962525 chr15:32962529 . . 0 25 hm5C_associated_SNPs_114227 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:32962515-32962545
64251 chr10 75520488 75520488 1 + C T UCEC 75520487 + 75520467 75520507 41 TCAGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTA TCAGGTTCCTTCGGACCAGCCTGGGGCCCTCAGTCTAATTA < 41bp 0.518684849285948 0.750959617168553 0.8634439 0.38805145 prediction 0.464549535765211 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520487 chr10:75520488 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_114229 0 0 2 BUD13 POSTAR2 ENCODE chr10:75520469-75520499
64251 chr4 77940386 77940386 1 + C A HNSC 77940385 + 77940365 77940405 41 TGGCAACAAGATGGCAAAGGCCAGGCAGTACCCCTGGGGTG TGGCAACAAGATGGCAAAGGCAAGGCAGTACCCCTGGGGTG < 41bp 0.569998140593063 0.802264230402709 0.24610797 0.37243116 prediction 0.464532179619292 Functional Gain - SEPT11 ENSG00000138758 CDS Human protein_coding chr4:77940385 chr4:77940386 synonymous SNV . 0 22 hm5C_associated_SNPs_114232 0 0 4 BUD13 POSTAR2 ENCODE chr4:77940373-77940414
64251 chr15 101169707 101169707 1 + C T UCEC 101169706 + 101169686 101169726 41 CACTATGCAGCCATGCATGGCCGGGCCCGCATTGCACGCTT CACTATGCAGCCATGCATGGCTGGGCCCGCATTGCACGCTT < 41bp 0.516035296502754 0.748300077712622 0.28270248 0.25123423 prediction 0.464529562419737 Functional Gain - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169706 chr15:101169707 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_114234 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:101169702-101169736
64251 chr8 23117743 23117743 1 + C A STAD 23117742 + 23117722 23117762 41 TTGGATCTGCCTGACAACCCCCGCAATAGGCATTTTACCAA TTGGATCTGCCTGACAACCCCAGCAATAGGCATTTTACCAA < 41bp 0.547237767514081 0.779497871097349 0.14031297 0.4014585 prediction 0.464520207166534 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23117742 chr8:23117743 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_114235 0 0 3 FUS POSTAR2 GSE43308,GSM1060381 chr8:23117740-23117760
64251 chr19 52800469 52800469 1 + C G rs560421543 52800468 + 52800448 52800488 41 CGCGTGGAGTGAAGGTCACGCCGCGGCGCGTGAGTTTCCCT CGCGTGGAGTGAAGGTCACGCGGCGGCGCGTGAGTTTCCCT < 41bp 0.556371730741782 0.788625582121097 0.25697738 0.7739432 prediction 0.46450770275863 Functional Gain - ZNF480 ENSG00000269102 ncRNA_intronic Human antisense chr19:52800468 chr19:52800469 . . 0 22 hm5C_associated_SNPs_114237 0 0 4 DDX3X POSTAR2 ENCODE chr19:52800444-52800477
64251 chr1 165619140 165619140 1 + T C SKCM 165619138 + 165619118 165619158 41 CTTCTAACTGGTGCTGCCAGCTTTATAATGGTGGCCCACCT CTTCTAACTGGTGCTGCCAGCTCTATAATGGTGGCCCACCT < 41bp 0.441724663106604 0.732246872752376 0.045708954 0.33071524 prediction 0.464493745504753 Functional Gain - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165619138 chr1:165619140 nonsynonymous SNV 0.839 1 23 hm5C_associated_SNPs_114239 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr1:165619104-165619142
64251 chr4 42072563 42072563 1 + C A UCEC 42072559 + 42072539 42072579 41 TTAGGCAATCCACTGTATGACAGCCTAGGTTCTTTGGGTGT TTAGGCAATCCACTGTATGACAGCATAGGTTCTTTGGGTGT < 41bp 0.319375972290624 0.732230829401756 0.22341117 0.21215695 prediction 0.464461658803512 Functional Gain - SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42072559 chr4:42072563 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_114245 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:42072559-42072580
64251 chr1 156563293 156563293 1 + C T STAD 156563292 + 156563272 156563312 41 CGGGAACCGTTCCACAGCATCCTGAGTGTCCTGAAGGGACT CGGGAACCGTTCCACAGCATCTTGAGTGTCCTGAAGGGACT < 41bp 0.459687514535156 0.732230392302072 0.1957345 0.3357914 prediction 0.464460784604144 Functional Gain - NAXE ENSG00000163382 CDS Human protein_coding chr1:156563292 chr1:156563293 nonsynonymous SNV 0.977 1 22 hm5C_associated_SNPs_114246 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156563259-156563304
64251 chr7 156759022 156759022 1 + C A UCEC 156759018 + 156758998 156759038 41 ATTCACGTTCTCATGGATTGCTGCCTTCAAGAGAAAACTTA ATTCACGTTCTCATGGATTGCTGCATTCAAGAGAAAACTTA < 41bp 0.30332260184634 0.732224523493329 0.04286307 0.1078465 prediction 0.464449046986658 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156759018 chr7:156759022 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_114248 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:156758926-156759032
64251 chr12 132281756 132281756 1 + C T UCEC 132281755 + 132281735 132281775 41 GAAGAAGAAGAAGAGGCGGTCCCGGTCGCGGACCAAGTCCA GAAGAAGAAGAAGAGGCGGTCTCGGTCGCGGACCAAGTCCA < 41bp 0.505678911818196 0.737885637370869 0.37286764 0.3396787 prediction 0.464413451105346 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132281755 chr12:132281756 synonymous SNV . 0 22 hm5C_associated_SNPs_114256 0 0 1 BUD13 POSTAR2 ENCODE chr12:132281713-132281784
64251 chr1 149858542 149858542 1 + A G UCEC 149858539 + 149858519 149858559 41 TCAGTCATGTCTGGTCGTGGCAAACAAGGAGGCAAGGCCCG TCAGTCATGTCTGGTCGTGGCAAGCAAGGAGGCAAGGCCCG < 41bp 0.509181291735687 0.741387382876242 0.24104673 0.37371135 prediction 0.464412182281109 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858539 chr1:149858542 synonymous SNV . 0 24 hm5C_associated_SNPs_114257 0 0 23 TARDBP POSTAR2 DRA001158,DRS012386 chr1:149858471-149858550
64251 chr14 60558838 60558838 1 + C G rs564659491 60558837 + 60558817 60558857 41 AGCCTGCTTTACGGCAGGGCCCGCCTCGGGAGCGAGCACAG AGCCTGCTTTACGGCAGGGCCGGCCTCGGGAGCGAGCACAG < 41bp 0.456091187619602 0.732202635974993 0.03242582 0.6931351 prediction 0.464405271949986 Functional Gain - PCNX4 ENSG00000126773 UTR5 Human protein_coding chr14:60558837 chr14:60558838 . . 0 22 hm5C_associated_SNPs_114260 0 0 2 DDX3X POSTAR2 ENCODE chr14:60558814-60558882
64251 chr17 4060250 4060250 1 + C T LUSC 4060249 + 4060229 4060269 41 CTGCGTGTGTGTGAGAACCACCGGCCCCCCTAGTGGCCAGA CTGCGTGTGTGTGAGAACCACTGGCCCCCCTAGTGGCCAGA < 41bp 0.498967600426098 0.732190595693876 0.14604628 0.08703536 prediction 0.464381191387751 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4060249 chr17:4060250 synonymous SNV . 0 22 hm5C_associated_SNPs_114265 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr17:4060250-4060251
64251 chr12 51453367 51453367 1 + T C rs111662542 51453365 + 51453345 51453385 41 GGGCTTCACAGCATGGCACACATGTGGGAACTGCAGACATT GGGCTTCACAGCATGGCACACACGTGGGAACTGCAGACATT < 41bp 0.497982670368651 0.732184542812231 0.24629593 0.17654958 prediction 0.464369085624462 Functional Gain - LETMD1 ENSG00000050426 UTR3 Human protein_coding chr12:51453365 chr12:51453367 . . 0 23 hm5C_associated_SNPs_114266 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr12:51453355-51453376
64251 chr19 5661818 5661818 1 + C T UCEC 5661817 + 5661797 5661837 41 CGGCGGCCCTACGACCTGGACCGGTAAGCAGATCCATGCTG CGGCGGCCCTACGACCTGGACTGGTAAGCAGATCCATGCTG < 41bp 0.503248956689929 0.735431822317692 0.08304849 0.11626598 prediction 0.464365731255527 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5661817 chr19:5661818 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_114268 0 0 6 FMR1 POSTAR2 ENCODE chr19:5661755-5661819
64251 chr20 46264785 46264785 1 + C T LUAD 46264784 + 46264764 46264804 41 GCCCCAAATTGGATAACTCTCCCAATATGAATATTACCCAA GCCCCAAATTGGATAACTCTCTCAATATGAATATTACCCAA < 41bp 0.468192675578874 0.732178112153765 0.21052364 0.41183448 prediction 0.464356224307529 Functional Gain - NCOA3 ENSG00000124151 CDS Human protein_coding chr20:46264784 chr20:46264785 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_114271 0 0 2 DDX24 POSTAR2 ENCODE chr20:46264757-46264791
64251 chr3 141161876 141161876 1 + C T STAD 141161875 + 141161855 141161895 41 TGCCACGAGGCAGAGCCTGTCCGCACACTTGCCGAGCACTC TGCCACGAGGCAGAGCCTGTCTGCACACTTGCCGAGCACTC < 41bp 0.547341560334404 0.77949010028103 0.13968718 0.18717784 prediction 0.464297079893253 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161875 chr3:141161876 nonsynonymous SNV 0.924 2 22 hm5C_associated_SNPs_114278 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:141161862-141161895
64251 chr16 84779244 84779244 1 + C T UCEC 84779243 + 84779223 84779263 41 AAGTCAAAGAAGGGCTTGTTCCGGTTTCAGAGGATCCTGTA AAGTCAAAGAAGGGCTTGTTCTGGTTTCAGAGGATCCTGTA < 41bp 0.497434532438515 0.732143083909378 0.41218302 0.123639226 prediction 0.464286167818755 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84779243 chr16:84779244 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_114280 0 0 15 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr16:84779222-84779254
64251 chr7 128457827 128457827 1 + A G UCEC 128457824 + 128457804 128457844 41 TGTTGCAGTCATCCCCTACCCCCAATCCCCCCATCTTCTCC TGTTGCAGTCATCCCCTACCCCCGATCCCCCCATCTTCTCC < 41bp 0.516892823780079 0.749029785390787 0.049931496 0.035746276 prediction 0.464273923221417 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128457824 chr7:128457827 nonsynonymous SNV 0.882 0 24 hm5C_associated_SNPs_114284 0 0 1 PTBP1 POSTAR2 ENCODE chr7:128457674-128457830
64251 chr17 34956424 34956424 1 + C T UCEC 34956423 + 34956403 34956443 41 TCTCAAACCCGAGGATGTGGCCGAGGCTGTTATCTACGTCC TCTCAAACCCGAGGATGTGGCTGAGGCTGTTATCTACGTCC < 41bp 0.502536278466009 0.73467303818955 0.29121912 0.25183028 prediction 0.464273519447082 Functional Gain - DHRS11 ENSG00000108272 CDS Human other chr17:34956423 chr17:34956424 synonymous SNV . 0 22 hm5C_associated_SNPs_114285 0 0 2 PPIG POSTAR2 ENCODE chr17:34956422-34956468
64251 chrX 101970890 101970890 1 + A G COAD 101970887 + 101970867 101970907 41 ATCCTAATACTGCCTTGAAACTCAGGGCCCAGAAAGATGTT ATCCTAATACTGCCTTGAAACTCGGGGCCCAGAAAGATGTT < 41bp 0.530185357811043 0.762320968087327 0.0826824 0.22185954 prediction 0.46427122055257 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101970887 chrX:101970890 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_114288 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:101970889-101970890
64251 chr17 46990343 46990343 1 + A G UCEC 46990340 + 46990320 46990360 41 ATAACACAGTGAGGTTTAACCCCAACTTCTACCGCAATGGG ATAACACAGTGAGGTTTAACCCCGACTTCTACCGCAATGGG < 41bp 0.515150408517071 0.747282367733812 0.3250053 0.6473092 prediction 0.464263918433481 Functional Gain - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:46990340 chr17:46990343 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_114292 0 0 2 TIAL1 POSTAR2 E-MTAB-432,ERR039780-ERR039783-ERR039784-ERR039785 chr17:46990324-46990345
64251 chr21 34922804 34922804 1 + C T LUAD 34922803 + 34922783 34922823 41 TTGCCAGGGCCCCTTTCTACCCCAGTGCCTGAGTTGCCAGG TTGCCAGGGCCCCTTTCTACCTCAGTGCCTGAGTTGCCAGG < 41bp 0.493551982410377 0.73212986592804 0.3368086 0.12217224 prediction 0.46425973185608 Functional Gain - SON ENSG00000159140 CDS Human protein_coding chr21:34922803 chr21:34922804 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_114295 0 0 31 FMR1 POSTAR2 GSE39682,GSM977616 chr21:34922605-34922946
64251 chr22 45243898 45243898 1 + C A UCEC 45243894 + 45243874 45243914 41 TCCGGAGATCCGCCAGCGTGCAGACCGTCCGCGAGATCCAG TCCGGAGATCCGCCAGCGTGCAGAACGTCCGCGAGATCCAG < 41bp 0.319255246662502 0.732119937203493 0.43071687 0.5648287 prediction 0.464239874406987 Functional Gain - ARHGAP8;PRR5-ARHGAP8 ENSG00000241484;ENSG00000248405 CDS Human other chr22:45243894 chr22:45243898 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_114299 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr22:45243872-45243908
64251 chr19 47876048 47876048 1 + C T rs562906654 47876047 + 47876027 47876067 41 GCCTGTGCTCACCATCGCAGCCGCACTTAGCGTCCAGTCGC GCCTGTGCTCACCATCGCAGCTGCACTTAGCGTCCAGTCGC < 41bp 0.564387058456532 0.796505007878849 0.17127901 0.2183533 prediction 0.464235898844633 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47876047 chr19:47876048 synonymous SNV . 0 22 hm5C_associated_SNPs_114301 0 0 1 BUD13 POSTAR2 ENCODE chr19:47876023-47876057
64251 chr10 22618363 22618363 1 + T A UCEC 22618359 + 22618339 22618379 41 TCCACAGTTTCCTCACATTTCCAGTACTATGAATGGAACCA TCCACAGTTTCCTCACATTTCCAGAACTATGAATGGAACCA < 41bp 0.407390576675826 0.732107099433827 0.0629268 0.17014498 prediction 0.464214198867653 Functional Gain - BMI1;COMMD3-BMI1 ENSG00000168283;ENSG00000269897 CDS Human other chr10:22618359 chr10:22618363 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_114310 0 0 18 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:22618311-22618369
64251 chr17 17997252 17997252 1 + C T STAD 17997251 + 17997231 17997271 41 GTCATGAAGTCGGGTGATGCCCGTGTGGCGCTGATTGGATT GTCATGAAGTCGGGTGATGCCTGTGTGGCGCTGATTGGATT < 41bp 0.480954404363147 0.732106347645362 0.101017356 0.07704055 prediction 0.464212695290724 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:17997251 chr17:17997252 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_114311 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:17997214-17997264
64251 chr11 17073675 17073675 1 + C A rs202076231 17073674 + 17073654 17073694 41 CAGAGGATCCAGAACTACAGCCGGTCCTCGCTGGGCTGTTC CAGAGGATCCAGAACTACAGCAGGTCCTCGCTGGGCTGTTC < 41bp 0.557590278908311 0.789693951148478 0.5574499 0.8068745 prediction 0.464207344480333 Functional Gain - OR7E14P ENSG00000184669 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:17073674 chr11:17073675 . . 0 22 hm5C_associated_SNPs_114314 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:17073648-17073686
64251 chr5 41934342 41934342 1 + C A UCEC 41934341 + 41934321 41934361 41 GAAGCCGGTACAGTGTGATTCCACAGATTCAAAAAGTGTGT GAAGCCGGTACAGTGTGATTCAACAGATTCAAAAAGTGTGT < 41bp 0.500709675380255 0.732810860472352 0.05377361 0.057826728 prediction 0.464202370184195 Functional Gain - FBXO4 ENSG00000151876 CDS Human protein_coding chr5:41934341 chr5:41934342 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_114316 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:41934318-41934344
64251 chr16 30960725 30960725 1 + A G STAD 30960722 + 30960702 30960742 41 TGCACCGCGGCTACCTGGACCTCATGGGGGCCAGTCAGCAC TGCACCGCGGCTACCTGGACCTCGTGGGGGCCAGTCAGCAC < 41bp 0.526289456314076 0.75838399678303 0.3112133 0.385423 prediction 0.464189080937908 Functional Gain - ORAI3 ENSG00000175938 CDS Human protein_coding chr16:30960722 chr16:30960725 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_114318 0 0 5 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:30960703-30960727
64251 chr11 64806190 64806190 1 + C G rs184908664 64806189 + 64806169 64806209 41 CCCACCCCTGCCTACCTAAGCCAGGCCACAGAGCTCATCAC CCCACCCCTGCCTACCTAAGCGAGGCCACAGAGCTCATCAC < 41bp 0.41085542852493 0.73208952662258 0.8191457 0.9133018 prediction 0.46417905324516 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64806189 chr11:64806190 nonsynonymous SNV 0.949 1 22 hm5C_associated_SNPs_114319 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64806178-64806226
64251 chr9 140083669 140083669 1 + C A SKCM 140083665 + 140083645 140083685 41 CCTGGCACGCAAGATTGCCTCTCGCAACGAGTTCGACCGGA CCTGGCACGCAAGATTGCCTCTCGAAACGAGTTCGACCGGA < 41bp 0.705128921660292 0.9372019905415 0.3594744 0.94425577 prediction 0.464146137762417 Functional Gain - SSNA1 ENSG00000176101 CDS Human protein_coding chr9:140083665 chr9:140083669 synonymous SNV . 0 25 hm5C_associated_SNPs_114323 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:140083657-140083691
64251 chr2 183621144 183621144 1 + C T UCEC 183621143 + 183621123 183621163 41 GGATGGTTGATTTCTATTCTCCGTGGTGTCATCCTTGCCAA GGATGGTTGATTTCTATTCTCTGTGGTGTCATCCTTGCCAA < 41bp 0.505329309366972 0.737402207166636 0.12663928 0.13771394 prediction 0.464145795599328 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183621143 chr2:183621144 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_114325 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:183621116-183621144
64251 chr6 44200593 44200593 1 + T A CESC 44200589 + 44200569 44200609 41 CAAGCCTGGTGCTGGCCCGGCTGGTGTTTGTGCCACTGCTG CAAGCCTGGTGCTGGCCCGGCTGGAGTTTGTGCCACTGCTG < 41bp 0.637066006114171 0.869133990859648 0.3766551 0.6087151 prediction 0.464135969490955 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44200589 chr6:44200593 nonsynonymous SNV 0.295 2 25 hm5C_associated_SNPs_114330 0 0 3 LIN28B POSTAR2 ENCODE chr6:44200540-44200610
64251 chr11 64855520 64855520 1 + C T UCEC 64855519 + 64855499 64855539 41 CATGTCTCGCCTAGGCCGGGCCGCAGCTGACAGCGATCCCA CATGTCTCGCCTAGGCCGGGCTGCAGCTGACAGCGATCCCA < 41bp 0.487192508139098 0.732066940310738 0.30254525 0.32774562 prediction 0.464133880621476 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855519 chr11:64855520 synonymous SNV . 0 22 hm5C_associated_SNPs_114332 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:64855480-64855526
64251 chr19 35657168 35657168 1 + C T COAD 35657167 + 35657147 35657187 41 TCTGCAGATGAACACACCCTCCGGAAACGGGGGCTGTTGGT TCTGCAGATGAACACACCCTCTGGAAACGGGGGCTGTTGGT < 41bp 0.559877799818245 0.79194144883799 0.26720253 0.8508709 prediction 0.464127298039489 Functional Gain - FXYD5 ENSG00000089327 CDS Human protein_coding chr19:35657167 chr19:35657168 nonsynonymous SNV 0.964 4 22 hm5C_associated_SNPs_114333 0 0 7 IGF2BP1 POSTAR2 ENCODE chr19:35657161-35657195
64251 chr6 33374066 33374066 1 + C A PRAD 33374062 + 33374042 33374082 41 TCACGCAGCCACAGTGTATTCCAGCTACAGATTTCTGGGGA TCACGCAGCCACAGTGTATTCCAGATACAGATTTCTGGGGA < 41bp 0.31804714587277 0.732062428749542 0.48325357 0.48660573 prediction 0.464124857499083 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33374062 chr6:33374066 nonsynonymous SNV 0.987 4 25 hm5C_associated_SNPs_114335 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:33374065-33374094
64251 chr20 44433800 44433800 1 + C T UCEC 44433799 + 44433779 44433819 41 GCACAGTGGGACCCAGCTCGCCTGAATGAATCTACCACCTT GCACAGTGGGACCCAGCTCGCTTGAATGAATCTACCACCTT < 41bp 0.559485545583522 0.791543466619815 0.032458246 0.05450681 prediction 0.464115842072585 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44433799 chr20:44433800 synonymous SNV . 0 22 hm5C_associated_SNPs_114337 0 0 1 TBRG4 POSTAR2 ENCODE chr20:44433775-44433815
64251 chr7 142961653 142961653 1 + C T SKCM 142961652 + 142961632 142961672 41 TCCTGGCAGGAAACAAGCCTCCAGGTCTGCTTCCCCGCAAA TCCTGGCAGGAAACAAGCCTCTAGGTCTGCTTCCCCGCAAA < 41bp 0.495029286045673 0.732053633416275 0.77737665 0.44251472 prediction 0.464107266832551 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142961652 chr7:142961653 nonsynonymous SNV 0.088 4 22 hm5C_associated_SNPs_114340 0 0 1 GRWD1 POSTAR2 ENCODE chr7:142961638-142961678
64251 chr2 131890543 131890543 1 + C G BLCA 131890539 + 131890519 131890559 41 TTCCTCACCTCCACCATACACGGCCTATGCTGCACCGGCCC TTCCTCACCTCCACCATACACGGCGTATGCTGCACCGGCCC < 41bp 0.607933911695298 0.839986201562778 0.37651074 0.85700834 prediction 0.46410457973496 Functional Gain - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131890539 chr2:131890543 synonymous SNV . 0 25 hm5C_associated_SNPs_114342 0 0 2 PRPF8 POSTAR2 ENCODE chr2:131890542-131890621
64251 chr4 159175060 159175060 1 + C G rs72975715 159175059 + 159175039 159175079 41 TCCATATTTCTCACCTATTACCCCAGTGAAGTGAGGCAGAA TCCATATTTCTCACCTATTACGCCAGTGAAGTGAGGCAGAA < 41bp 0.628832838090446 0.860883476681363 0.07982528 0.1763852 prediction 0.464101277181834 Functional Gain - TMEM144 ENSG00000164124 UTR3 Human protein_coding chr4:159175059 chr4:159175060 . . 0 22 hm5C_associated_SNPs_114343 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr4:159175038-159175064
64251 chr3 52513791 52513791 1 + A G LIHC 52513788 + 52513768 52513808 41 TGTCTGGATGACACAGTGACCACAGAGAAGGAGCTGGACAC TGTCTGGATGACACAGTGACCACGGAGAAGGAGCTGGACAC < 41bp 0.498162780614613 0.732050048028397 0.2993572 0.600425 prediction 0.464100096056793 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52513788 chr3:52513791 synonymous SNV . 0 24 hm5C_associated_SNPs_114344 0 0 19 CPSF1 POSTAR2 GSE37401,GSM917672 chr3:52513774-52513805
64251 chr16 23677033 23677033 1 + C A SKCM 23677029 + 23677009 23677049 41 AACTGTGGTTCCACCATTCACTGTCTTCTCAGGCTGCCCAG AACTGTGGTTCCACCATTCACTGTATTCTCAGGCTGCCCAG < 41bp 0.310937238734376 0.732043431330237 0.09841734 0.18447581 prediction 0.464086862660475 Functional Gain - DCTN5 ENSG00000166847 CDS Human protein_coding chr16:23677029 chr16:23677033 synonymous SNV . 0 25 hm5C_associated_SNPs_114348 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:23677016-23677040
64251 chr13 114286001 114286001 1 + C A GBM 114286000 + 114285980 114286020 41 GTGGTAGGAAGCCCACACACCCCCAGCACTCACTTTGCCTC GTGGTAGGAAGCCCACACACCACCAGCACTCACTTTGCCTC < 41bp 0.527962288260881 0.759972949790413 0.060059637 0.108685315 prediction 0.464021323059064 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114286000 chr13:114286001 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_114361 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:114285975-114286002
64251 chr19 13055024 13055024 1 + A G rs191183059 13055021 + 13055001 13055041 41 TCTGTCCCCTTCTCTCATCTCTTAGCTCCCCTCCAACCTGG TCTGTCCCCTTCTCTCATCTCTTGGCTCCCCTCCAACCTGG < 41bp 0.508265183667259 0.740260932713124 0.017566532 0.04237315 prediction 0.46399149809173 Functional Gain - CALR ENSG00000267458;ENSG00000179218 ncRNA_exonic;splicing Human other chr19:13055021 chr19:13055024 . . 0 24 hm5C_associated_SNPs_114369 0 0 42 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:13054900-13055040
64251 chr1 45974781 45974781 1 + C G MESO 45974780 + 45974760 45974800 41 AGAAGCCTAGTTCTCCCTCCCCGGACCTTCCCTTTACCACA AGAAGCCTAGTTCTCCCTCCCGGGACCTTCCCTTTACCACA < 41bp 0.637168662580977 0.869164352127146 0.019341648 0.89794695 prediction 0.463991379092339 Functional Gain - MMACHC ENSG00000132763 CDS Human protein_coding chr1:45974780 chr1:45974781 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_114370 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:45974774-45974804
64251 chr11 57456012 57456012 1 + C T COAD 57456011 + 57455991 57456031 41 GAGGACAAGGAAGATGATTTCCGAGCTCCCCTTTACAAAAC GAGGACAAGGAAGATGATTTCTGAGCTCCCCTTTACAAAAC < 41bp 0.545341775587826 0.777334433350341 0.5371565 0.20243236 prediction 0.46398531552503 Functional Gain - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57456011 chr11:57456012 stopgain 1.000 1 22 hm5C_associated_SNPs_114372 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:57455979-57456013
64251 chr19 50155935 50155935 1 + C T SKCM 50155934 + 50155914 50155954 41 CGCCTCCTCCTCCTCCTCTTCCCGGGAGAAGGGGTCTCGTC CGCCTCCTCCTCCTCCTCTTCTCGGGAGAAGGGGTCTCGTC < 41bp 0.530780584041257 0.762762280781827 0.86214703 0.39084023 prediction 0.46396339348114 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155934 chr19:50155935 synonymous SNV . 0 22 hm5C_associated_SNPs_114374 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50155904-50156014
64251 chr8 125463305 125463305 1 + A G UCEC 125463302 + 125463282 125463322 41 GAGGCAGAAACTCTTTGATACACAGCACCGTGTGGAAAAGA GAGGCAGAAACTCTTTGATACACGGCACCGTGTGGAAAAGA < 41bp 0.510606881350591 0.742585646054084 0.017546594 0.11384502 prediction 0.463957529406984 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125463302 chr8:125463305 nonsynonymous SNV 0.833 0 24 hm5C_associated_SNPs_114376 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr8:125463273-125463307
64251 chr20 2843995 2843995 1 + C A LIHC 2843994 + 2843974 2844014 41 TATGCGAGTACTTGCGCCTTCCTGAAGTACAGGGCGTCAGC TATGCGAGTACTTGCGCCTTCATGAAGTACAGGGCGTCAGC < 41bp 0.474205897695676 0.731964578068806 0.6189493 0.58913213 prediction 0.463929156137611 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2843994 chr20:2843995 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_114379 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr20:2843974-2843998
64251 chrX 17768306 17768306 1 + A G UCEC 17768303 + 17768283 17768323 41 TTGTCAGCCGTATTATGCATCTGATGGTGCAACGTATGGTT TTGTCAGCCGTATTATGCATCTGGTGGTGCAACGTATGGTT < 41bp 0.532472670056714 0.764437209932285 0.109938264 0.14232364 prediction 0.463929079751144 Functional Gain - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768303 chrX:17768306 nonsynonymous SNV 0.003 1 24 hm5C_associated_SNPs_114380 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:17768229-17768312
64251 chr11 47176775 47176775 1 + T A SKCM 47176771 + 47176751 47176791 41 GGACTGCTTGATGTCTTTTTCAGATTTCCTCTTTGCCTTCC GGACTGCTTGATGTCTTTTTCAGAATTCCTCTTTGCCTTCC < 41bp 0.433368183469046 0.731962911168565 0.90873843 0.9282305 prediction 0.463925822337129 Functional Gain - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47176771 chr11:47176775 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_114381 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:47176744-47176782
64251 chr19 47774695 47774695 1 + C T LUAD 47774694 + 47774674 47774714 41 ACCAGCCCAAGACCACCAAGCCCCAGAGGCTGCCCCCACCG ACCAGCCCAAGACCACCAAGCTCCAGAGGCTGCCCCCACCG < 41bp 0.54803975696839 0.77998596879264 0.22127807 0.9195051 prediction 0.4638924236485 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774694 chr19:47774695 synonymous SNV . 0 22 hm5C_associated_SNPs_114384 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr19:47774687-47774731
64251 chr16 68943298 68943298 1 + T C UCEC 68943296 + 68943276 68943316 41 TCTGAGCAGATATTCACAAACGTCACTCAGGTCAGTAGTTG TCTGAGCAGATATTCACAAACGCCACTCAGGTCAGTAGTTG < 41bp 0.447626819939511 0.731942505142637 0.19959167 0.07746294 prediction 0.463885010285274 Functional Gain - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68943296 chr16:68943298 nonsynonymous SNV 0.982 0 23 hm5C_associated_SNPs_114387 0 0 2 EIF3H POSTAR2 ENCODE chr16:68943208-68943306
64251 chr16 29690494 29690494 1 + C A LUAD 29690490 + 29690470 29690510 41 CCTTGGTCCTGAGCAGCCAACACACCAGCCCAGACAGCTGC CCTTGGTCCTGAGCAGCCAACACAACAGCCCAGACAGCTGC < 41bp 0.397154257255016 0.731940673725844 0.12409592 0.15530363 prediction 0.463881347451689 Functional Gain - QPRT ENSG00000103485 UTR5 Human protein_coding chr16:29690490 chr16:29690494 . . 0 25 hm5C_associated_SNPs_114389 0 0 1 DDX3X POSTAR2 ENCODE chr16:29690466-29690510
64251 chr1 147095893 147095893 1 + C T UCEC 147095892 + 147095872 147095912 41 TCAAGGACGGATGGGCTTCCCCCAGGGCTTCCCTCCAGTAC TCAAGGACGGATGGGCTTCCCTCAGGGCTTCCCTCCAGTAC < 41bp 0.536358436526623 0.768291832017065 0.23820153 0.14544469 prediction 0.463866790980885 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147095892 chr1:147095893 synonymous SNV . 0 22 hm5C_associated_SNPs_114394 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:147095874-147095907
64251 chr10 64565000 64565000 1 + C G THCA 64564996 + 64564976 64565016 41 AAGCTGAAGAGCCTCCTGACCCAGCTCCGCGCCGAGGACTT AAGCTGAAGAGCCTCCTGACCCAGGTCCGCGCCGAGGACTT < 41bp 0.446585909631063 0.731924720753944 0.341985 0.73078656 prediction 0.463849441507889 Functional Gain - ADO ENSG00000181915 CDS Human protein_coding chr10:64564996 chr10:64565000 nonsynonymous SNV 0.932 0 25 hm5C_associated_SNPs_114398 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:64564913-64565043
64251 chrX 54838071 54838071 1 + C G OV 54838067 + 54838047 54838087 41 CCCCGAAATCATTGAACGAGCAGGCTATTCCTTGGAGAAGG CCCCGAAATCATTGAACGAGCAGGGTATTCCTTGGAGAAGG < 41bp 0.620844003019228 0.852766065507506 0.44332415 0.8577146 prediction 0.463844124976556 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54838067 chrX:54838071 synonymous SNV . 0 25 hm5C_associated_SNPs_114399 0 0 6 DDX24 POSTAR2 ENCODE chrX:54838052-54838113
64251 chr3 9517681 9517681 1 + A G STAD 9517678 + 9517658 9517698 41 GGTATCTGCGGTTTCCAATTCACAGCACTACCCACACCGTG GGTATCTGCGGTTTCCAATTCACGGCACTACCCACACCGTG < 41bp 0.509801106538111 0.741721775547628 0.11085421 0.5834731 prediction 0.463841338019034 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9517678 chr3:9517681 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_114400 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:9517648-9517686
64251 chr5 154183274 154183274 1 + T A LUAD 154183270 + 154183250 154183290 41 GCCAGACATCACGGTTTTACCCAGTGGTGAAAGAAGGACGG GCCAGACATCACGGTTTTACCCAGAGGTGAAAGAAGGACGG < 41bp 0.404238212776414 0.731920351423331 0.23287335 0.91261077 prediction 0.463840702846662 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154183270 chr5:154183274 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_114401 0 0 21 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154183160-154183277
64251 chr19 3209483 3209483 1 + T G rs4594 3209481 + 3209461 3209501 41 TTCCTTCCTGGACAGGTCGTCATGATGGATGCACTGACTGA TTCCTTCCTGGACAGGTCGTCAGGATGGATGCACTGACTGA < 41bp 0.469130046625925 0.731919701847092 0.40069497 0.86310387 prediction 0.463839403694184 Functional Gain - NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3209481 chr19:3209483 . . 0 23 hm5C_associated_SNPs_114402 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:3209417-3209526
64251 chr6 160234645 160234645 1 + C T SKCM 160234644 + 160234624 160234664 41 TGATTGTAGGAGATGAATTTCCCGAGGGTGTCGAATCTTTC TGATTGTAGGAGATGAATTTCTCGAGGGTGTCGAATCTTTC < 41bp 0.56522435655466 0.797130872852049 0.42003584 0.28260884 prediction 0.463813032594776 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160234644 chr6:160234645 nonsynonymous SNV 0.632 0 22 hm5C_associated_SNPs_114407 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:160234628-160234659
64251 chr6 10959066 10959066 1 + C A LUAD 10959065 + 10959045 10959085 41 CAGAAAATGCAAAGAAAGCACCGGATTGCCTAATAAAACTT CAGAAAATGCAAAGAAAGCACAGGATTGCCTAATAAAACTT < 41bp 0.474558323318589 0.731905311056083 0.062331587 0.19758579 prediction 0.463810622112166 Functional Gain - SYCP2L ENSG00000153157 CDS Human protein_coding chr6:10959065 chr6:10959066 nonsynonymous SNV 0.370 1 22 hm5C_associated_SNPs_114408 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:10959066-10959114
64251 chr1 154960813 154960813 1 + A G UCEC 154960810 + 154960790 154960830 41 CTTTGGAGATGAGCTGAAGCCACACCCCAAGTTGGAAGCAG CTTTGGAGATGAGCTGAAGCCACGCCCCAAGTTGGAAGCAG < 41bp 0.531509266187375 0.763395313709731 0.07737556 0.20705214 prediction 0.463772095044712 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154960810 chr1:154960813 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_114418 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:154960754-154960816
64251 chr1 71532583 71532583 1 - G C BLCA 71532584 - 71532564 71532604 41 TCCCACAGGGGCTCTTCTTCCCCACGAAAAAGATCTTATTC TCCCACAGGGGCTCTTCTTCCGCACGAAAAAGATCTTATTC < 41bp 0.421763327198749 0.731877264285982 0.043350726 0.08548227 prediction 0.463754528571965 Functional Gain - ZRANB2 ENSG00000132485 CDS Human protein_coding chr1:71532584 chr1:71532583 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_114422 0 0 16 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:71532560-71532600
64251 chr1 29391656 29391656 1 + C T SKCM 29391655 + 29391635 29391675 41 CTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAG CTTAACATCAATGGGCAAATCTCCACAGGAGAAGGAGTGAG < 41bp 0.465630702610832 0.731877210299328 0.13612157 0.96463525 prediction 0.463754420598656 Functional Gain - EPB41 ENSG00000159023 CDS Human protein_coding chr1:29391655 chr1:29391656 nonsynonymous SNV 0.958 3 22 hm5C_associated_SNPs_114423 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:29391606-29391657
64251 chr6 43127577 43127577 1 + C A rs55921533 43127576 + 43127556 43127596 41 GCCGCTGCGCTGGATGTCCCCCGAGGCCATCCTGGAGGGTG GCCGCTGCGCTGGATGTCCCCAGAGGCCATCCTGGAGGGTG < 41bp 0.565046328399019 0.796921661714259 0.66233593 0.9141768 prediction 0.463750666630481 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43127576 chr6:43127577 synonymous SNV . 0 22 hm5C_associated_SNPs_114425 0 0 1 SND1 POSTAR2 ENCODE chr6:43127534-43127600
64251 chr6 28333369 28333369 1 + C T SKCM 28333368 + 28333348 28333388 41 ACAAAGAAAGCAGAAAAATGCCACAGGAGGGAGGCGGCACA ACAAAGAAAGCAGAAAAATGCTACAGGAGGGAGGCGGCACA < 41bp 0.54549204059427 0.777367193661354 0.3373949 0.85996234 prediction 0.463750306134167 Functional Gain - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28333368 chr6:28333369 synonymous SNV . 0 22 hm5C_associated_SNPs_114426 0 0 1 PPIG POSTAR2 ENCODE chr6:28333211-28333384
64251 chr17 35872727 35872727 1 + C G BLCA 35872723 + 35872703 35872743 41 ACTGTGCTGCAGGGGTGAGCCGCTCAGCCACGCTGTGTATC ACTGTGCTGCAGGGGTGAGCCGCTGAGCCACGCTGTGTATC < 41bp 0.448878261665811 0.731873696906108 0.21040562 0.8775706 prediction 0.463747393812215 Functional Gain - DUSP14 ENSG00000161326 CDS Human other chr17:35872723 chr17:35872727 stopgain 0.985 1 25 hm5C_associated_SNPs_114428 0 0 1 RBM15 POSTAR2 ENCODE chr17:35872700-35872738
64251 chr1 6640826 6640826 1 + A G SKCM 6640823 + 6640803 6640843 41 CCTGCTGCAGTCACTTTTTCCAGAGCCTCTACGGGGATGGC CCTGCTGCAGTCACTTTTTCCAGGGCCTCTACGGGGATGGC < 41bp 0.521802993739909 0.753673262754553 0.9269523 0.9332063 prediction 0.463740538029289 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6640823 chr1:6640826 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_114430 0 0 3 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:6640807-6640828
64251 chr1 113238173 113238173 1 + C T UCEC 113238172 + 113238152 113238192 41 CTGGCCCCCAGCAGGGACATCCGCATGGTACCTGAGGACAT CTGGCCCCCAGCAGGGACATCTGCATGGTACCTGAGGACAT < 41bp 0.465687876225058 0.731862147561944 0.0716317 0.77093554 prediction 0.463724295123888 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238172 chr1:113238173 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_114431 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr1:113238167-113238196
64251 chr7 100466486 100466486 1 + C T SKCM 100466485 + 100466465 100466505 41 AGAGGAGGCGAGCACGGGCCCCAGGTGAGCCCTGGGGAACT AGAGGAGGCGAGCACGGGCCCTAGGTGAGCCCTGGGGAACT < 41bp 0.510501314885583 0.742358220878544 0.7485709 0.49046612 prediction 0.463713811985922 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466485 chr7:100466486 stopgain 0.312 0 22 hm5C_associated_SNPs_114434 0 0 3 DDX6 POSTAR2 ENCODE chr7:100466453-100466488
64251 chr2 219619165 219619165 1 + C G rs193071168 219619161 + 219619141 219619181 41 GGAGCATGGGCATCAGCTACCTCACGGGAACCAGCCTGCTG GGAGCATGGGCATCAGCTACCTCAGGGGAACCAGCCTGCTG < 41bp 0.437354192428162 0.731855234756268 0.1083343 0.16728574 prediction 0.463710469512537 Functional Gain - TTLL4 ENSG00000135912 UTR3 Human protein_coding chr2:219619161 chr2:219619165 . . 0 25 hm5C_associated_SNPs_114436 0 0 2 IGF2BP1 POSTAR2 ENCODE chr2:219619048-219619201
64251 chr17 18781016 18781016 1 + T C STAD 18781014 + 18780994 18781034 41 CTGTGTCTTTGTTACAGGGACGTGAACACCACCATCATGGA CTGTGTCTTTGTTACAGGGACGCGAACACCACCATCATGGA < 41bp 0.443945979485457 0.731853639707651 0.061345577 0.076042205 prediction 0.463707279415303 Functional Gain - PRPSAP2 ENSG00000141127 CDS Human protein_coding chr17:18781014 chr17:18781016 nonsynonymous SNV 0.988 2 23 hm5C_associated_SNPs_114437 0 0 1 DDX24 POSTAR2 ENCODE chr17:18781009-18781037
64251 chr1 161931049 161931049 1 + C G rs41271953 161931045 + 161931025 161931065 41 TGGTAGCAGGGCCGGCAGCTCTGCCACAGAGCTAGGGGTGC TGGTAGCAGGGCCGGCAGCTCTGCGACAGAGCTAGGGGTGC < 41bp 0.465153255328439 0.731849321088933 0.39309514 0.43897706 prediction 0.463698642177866 Functional Gain - ATF6 ENSG00000118217 UTR3 Human protein_coding chr1:161931045 chr1:161931049 . . 0 25 hm5C_associated_SNPs_114439 0 0 1 IGF2BP3 POSTAR2 ENCODE chr1:161930938-161931055
64251 chr3 127325137 127325137 1 + C T PAAD 127325136 + 127325116 127325156 41 ATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCT ATCACCAACCACATCCATGTCTGCATCTCCCACCTGCCTCT < 41bp 0.582997698206788 0.814842434663589 0.09623185 0.1426701 prediction 0.463689472913601 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127325136 chr3:127325137 nonsynonymous SNV 0.959 4 22 hm5C_associated_SNPs_114442 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:127325062-127325143
64251 chr1 156830825 156830825 1 + C A rs554115998 156830824 + 156830804 156830844 41 GATACTGGCATCTGCGGGCGCCGCACCCTGCCCCGATGCCT GATACTGGCATCTGCGGGCGCAGCACCCTGCCCCGATGCCT < 41bp 0.524284525153953 0.75612876939409 0.42541936 0.7202266 prediction 0.463688488480273 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156830824 chr1:156830825 synonymous SNV . 0 22 hm5C_associated_SNPs_114443 0 0 1 DDX3X POSTAR2 ENCODE chr1:156830645-156830867
64251 chr1 16786168 16786168 1 + C A rs279023 16786164 + 16786144 16786184 41 CCAAGGCGGGTGCTGGAAGCCAGACGGAACAGTGTTGGGGC CCAAGGCGGGTGCTGGAAGCCAGAAGGAACAGTGTTGGGGC < 41bp 0.670751418848235 0.902588832428163 0.48338118 0.532425 prediction 0.463674827159855 Functional Gain - NECAP2 ENSG00000157191 UTR3 Human protein_coding chr1:16786164 chr1:16786168 . . 0 25 hm5C_associated_SNPs_114445 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:16786160-16786180
64251 chr15 34520687 34520687 1 + T C rs116858574 34520685 + 34520665 34520705 41 CTTCAGGGTTTGGTCTATCTCATTGGGAACCTGATGGGTTT CTTCAGGGTTTGGTCTATCTCACTGGGAACCTGATGGGTTT < 41bp 0.560134439151355 0.791952366187594 0.37702715 0.40482867 prediction 0.463635854072478 Functional Gain - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520685 chr15:34520687 nonsynonymous SNV 0.990 2 23 hm5C_associated_SNPs_114451 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:34520652-34520688
64251 chr7 2409186 2409186 1 + C A HNSC 2409185 + 2409165 2409205 41 GATATTCCAGCCAGGGTAACCCTGATGCAGCTCCCTACCAG GATATTCCAGCCAGGGTAACCATGATGCAGCTCCCTACCAG < 41bp 0.478839830514603 0.73180466843345 0.21383533 0.24008384 prediction 0.463609336866899 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2409185 chr7:2409186 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_114454 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:2409174-2409205
64251 chr6 80383448 80383448 1 + C A LUSC 80383447 + 80383427 80383467 41 TGGATGTACAAAAACGTCCCCCCGGAAAAGAAACCCACTCA TGGATGTACAAAAACGTCCCCACGGAAAAGAAACCCACTCA < 41bp 0.476845778804003 0.731799944542672 0.03129223 0.08106652 prediction 0.463599889085344 Functional Gain - SH3BGRL2 ENSG00000198478 CDS Human protein_coding chr6:80383447 chr6:80383448 nonsynonymous SNV 0.928 0 22 hm5C_associated_SNPs_114455 0 0 3 EWSR1 POSTAR2 SRX029344 chr6:80383423-80383453
64251 chr6 127608325 127608325 1 + C T STAD 127608324 + 127608304 127608344 41 GCTAGACTGTGATGCTAATACCGTAAACCTAGCAAGAGAGA GCTAGACTGTGATGCTAATACTGTAAACCTAGCAAGAGAGA < 41bp 0.536556733342909 0.768350009408753 0.2681056 0.21017516 prediction 0.463586552131688 Functional Gain - RNF146 ENSG00000118518 CDS Human protein_coding chr6:127608324 chr6:127608325 synonymous SNV . 0 22 hm5C_associated_SNPs_114457 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr6:127608317-127608338
64251 chr15 29346097 29346097 1 + C T STAD 29346096 + 29346076 29346116 41 TGAACGACTGCCATGGCCCACCGGAAGCTTGAGAGCGTGGG TGAACGACTGCCATGGCCCACTGGAAGCTTGAGAGCGTGGG < 41bp 0.542486841455137 0.774271320971549 0.13916823 0.110222906 prediction 0.463568959032824 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346096 chr15:29346097 nonsynonymous SNV 0.977 4 22 hm5C_associated_SNPs_114459 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:29346096-29346097
64251 chr1 161130921 161130921 1 + C T SKCM 161130920 + 161130900 161130940 41 TCCGCCGCCTAGGGGGCTTTCCTGGACCCCCTACCCTGTTC TCCGCCGCCTAGGGGGCTTTCTTGGACCCCCTACCCTGTTC < 41bp 0.548205956858387 0.779986052640724 0.2616696 0.12969589 prediction 0.463560191564674 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130920 chr1:161130921 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_114460 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:161130920-161130921
64251 chr6 33371778 33371778 1 + C A rs142313923 33371774 + 33371754 33371794 41 GGCCAACAGGAGCTGAAGAACTTGCGTGCTTGTGTCCTGGA GGCCAACAGGAGCTGAAGAACTTGAGTGCTTGTGTCCTGGA < 41bp 0.310866774100052 0.731778576862649 0.72991645 0.87693286 prediction 0.463557153725299 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33371774 chr6:33371778 nonsynonymous SNV 0.030 0 25 hm5C_associated_SNPs_114461 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:33371757-33371796
64251 chr1 11848054 11848054 1 - T C rs34733339 11848057 - 11848037 11848077 41 TGGGCTTTGCAGGCTCTGGGCTCAGGGCTGGAGTGCGCTCT TGGGCTTTGCAGGCTCTGGGCTCGGGGCTGGAGTGCGCTCT < 41bp 0.490255920170433 0.731777515593545 0.66541696 0.8180629 prediction 0.46355503118709 Functional Gain - C1orf167 ENSG00000215910 CDS Human protein_coding chr1:11848057 chr1:11848054 synonymous SNV . 0 24 hm5C_associated_SNPs_114462 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:11848054-11848070
64251 chr9 131046910 131046910 1 + A G KICH 131046907 + 131046887 131046927 41 GGAGATCTCCCAGTTCGTATCTGAGTAAGTTTCATTGGGTT GGAGATCTCCCAGTTCGTATCTGGGTAAGTTTCATTGGGTT < 41bp 0.520413014968612 0.752174647617915 0.61338204 0.8936168 prediction 0.463523265298606 Functional Gain - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131046907 chr9:131046910 nonsynonymous SNV 0.975 4 24 hm5C_associated_SNPs_114468 0 0 5 LIN28B POSTAR2 ENCODE chr9:131046865-131046910
64251 chr19 49376606 49376606 1 + T C UCEC 49376604 + 49376584 49376624 41 GCCTGGAGCCGCCTGAGGGGCCTGGGACCTCTAGAGCCCTG GCCTGGAGCCGCCTGAGGGGCCCGGGACCTCTAGAGCCCTG < 41bp 0.486731065257162 0.731760171973813 0.40815854 0.7608334 prediction 0.463520343947627 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376604 chr19:49376606 nonsynonymous SNV 0.385 0 23 hm5C_associated_SNPs_114469 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49376589-49376631
64251 chr20 47570302 47570302 1 + C T SKCM 47570301 + 47570281 47570321 41 CACAGAAAATGGAGACGCACCCAGAGAAAGAGGCTCATCAC CACAGAAAATGGAGACGCACCTAGAGAAAGAGGCTCATCAC < 41bp 0.545652132814282 0.777406607577434 0.40678936 0.32687196 prediction 0.463508949526303 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47570301 chr20:47570302 synonymous SNV . 0 22 hm5C_associated_SNPs_114471 0 0 2 FASTKD2 POSTAR2 ENCODE chr20:47570302-47570324
64251 chr5 916041 916041 1 + C T BLCA 916040 + 916020 916060 41 AAGAGCGAGGGCCTCAGCGGCCGGGTCCTGAGAAAACTCCC AAGAGCGAGGGCCTCAGCGGCTGGGTCCTGAGAAAACTCCC < 41bp 0.533633967702798 0.765387335923396 0.25488055 0.24944258 prediction 0.463506736441196 Functional Gain - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:916040 chr5:916041 nonsynonymous SNV 0.995 5 22 hm5C_associated_SNPs_114472 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:916016-916061
64251 chr3 193854764 193854764 1 + C T ESCA 193854763 + 193854743 193854783 41 TATGCAGAGCTCGCGGCATTCCAAGCTGGAGAAGGCGGACA TATGCAGAGCTCGCGGCATTCTAAGCTGGAGAAGGCGGACA < 41bp 0.480447731758423 0.731725412613721 0.44842595 0.47621647 prediction 0.463450825227441 Functional Gain - HES1 ENSG00000114315 CDS Human protein_coding chr3:193854763 chr3:193854764 synonymous SNV . 0 22 hm5C_associated_SNPs_114477 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chr3:193854763-193854764
64251 chr7 55499145 55499145 1 + C A rs78231031 55499141 + 55499121 55499161 41 CACAGGCCCCTCTGGTTAGACTAGCATGAGTGACCGAAGCC CACAGGCCCCTCTGGTTAGACTAGAATGAGTGACCGAAGCC < 41bp 0.344587264972462 0.731723747900798 0.18127236 0.20892423 prediction 0.463447495801596 Functional Gain - LANCL2 ENSG00000132434 UTR3 Human protein_coding chr7:55499141 chr7:55499145 . . 0 25 hm5C_associated_SNPs_114479 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr7:55499123-55499156
64251 chr1 196642210 196642210 1 + C A LGG 196642206 + 196642186 196642226 41 CCCAGGCTATCTATAAATGCCGCCCTGGATATAGATCTCTT CCCAGGCTATCTATAAATGCCGCCATGGATATAGATCTCTT < 41bp 0.296754914671386 0.731720607078675 0.006776482 0.055647075 prediction 0.463441214157351 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196642206 chr1:196642210 nonsynonymous SNV 0.663 3 25 hm5C_associated_SNPs_114480 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:196642187-196642225
64251 chr1 203012543 203012543 1 + C A HNSC 203012542 + 203012522 203012562 41 CAGGAATTTGCCACCTTAACCCGGGAGCTGAGCATGTGTCG CAGGAATTTGCCACCTTAACCAGGGAGCTGAGCATGTGTCG < 41bp 0.468325717101103 0.731716634643087 0.9234437 0.9299805 prediction 0.463433269286175 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203012542 chr1:203012543 synonymous SNV . 0 22 hm5C_associated_SNPs_114481 0 0 1 BUD13 POSTAR2 ENCODE chr1:203012526-203012559
64251 chr14 74531573 74531573 1 - G A rs147004133 74531574 - 74531554 74531594 41 TTTGCCAATGTTCTCATTCACCGGCTCTCGATCCTCCTTCA TTTGCCAATGTTCTCATTCACTGGCTCTCGATCCTCCTTCA < 41bp 0.541252618479982 0.772965416813965 0.24978378 0.25084245 prediction 0.463425596667967 Functional Gain - ALDH6A1 ENSG00000119711 CDS Human protein_coding chr14:74531574 chr14:74531573 synonymous SNV . 0 22 hm5C_associated_SNPs_114484 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:74531558-74531590
64251 chr3 63976502 63976502 1 + T C CESC 63976500 + 63976480 63976520 41 CTTCGCTGCGCCCTCAACCTCATGGTGGAGAAGCATCTGAA CTTCGCTGCGCCCTCAACCTCACGGTGGAGAAGCATCTGAA < 41bp 0.445877572338304 0.731701180324911 0.42762154 0.4327959 prediction 0.463402360649821 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63976500 chr3:63976502 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_114487 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:63976478-63976528
64251 chr1 246810500 246810500 1 + C T SKCM 246810499 + 246810479 246810519 41 AGCCAACATACAGTGGAGCCCCTGGGGAGCAGTCCCTGCTG AGCCAACATACAGTGGAGCCCTTGGGGAGCAGTCCCTGCTG < 41bp 0.522376332783644 0.754073642974608 0.6618217 0.40862596 prediction 0.463394620381929 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810499 chr1:246810500 synonymous SNV . 0 22 hm5C_associated_SNPs_114488 0 0 6 FMR1 POSTAR2 ENCODE chr1:246810486-246810538
64251 chr1 150131671 150131671 1 + C T rs147826474 150131670 + 150131650 150131690 41 CTGCAGACCCCGGACTCCCACCTCAGACAGACCACCCCGCA CTGCAGACCCCGGACTCCCACTTCAGACAGACCACCCCGCA < 41bp 0.48281370163432 0.73169608804188 0.050239086 0.12504524 prediction 0.463392176083761 Functional Gain - PLEKHO1 ENSG00000023902 CDS Human protein_coding chr1:150131670 chr1:150131671 nonsynonymous SNV 0.932 0 22 hm5C_associated_SNPs_114490 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150131653-150131677
64251 chr20 11899206 11899206 1 + C A UCEC 11899205 + 11899185 11899225 41 CTCAGTAACAACAACCTTATCCCGGCCCCAAACTGGCAGGG CTCAGTAACAACAACCTTATCACGGCCCCAAACTGGCAGGG < 41bp 0.556180823067749 0.787876472212247 0.3189494 0.38757774 prediction 0.463391298288997 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11899205 chr20:11899206 nonsynonymous SNV 0.975 1 22 hm5C_associated_SNPs_114491 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:11899169-11899218
64251 chr12 113698217 113698217 1 + A G UCEC 113698214 + 113698194 113698234 41 ACGACTCCCAGGCCCCCAGTCTCAGCTCTGGGGGTGAGAGT ACGACTCCCAGGCCCCCAGTCTCGGCTCTGGGGGTGAGAGT < 41bp 0.544198351321573 0.775893924844679 0.06922543 0.23647073 prediction 0.463391147046213 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113698214 chr12:113698217 nonsynonymous SNV 0.020 0 24 hm5C_associated_SNPs_114492 0 0 1 BUD13 POSTAR2 ENCODE chr12:113698145-113698228
64251 chr17 4801194 4801194 1 + T A rs8834 4801190 + 4801170 4801210 41 CTTCTAGCCCATGCCCTTCCCCGGTGGAGGGAGGGAGCAGG CTTCTAGCCCATGCCCTTCCCCGGAGGAGGGAGGGAGCAGG < 41bp 0.452909102017477 0.731693570695639 0.5729735 0.924436 prediction 0.463387141391278 Functional Gain - CHRNE;MINK1 ENSG00000108556;ENSG00000141503 UTR3 Human other chr17:4801190 chr17:4801194 . . 0 25 hm5C_associated_SNPs_114493 0 0 14 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:4801191-4801206
64251 chr20 1108135 1108135 1 + C A LIHC 1108134 + 1108114 1108154 41 GATTATATCGATGCAGAACACCTGGGTGACTTCCACAGGTA GATTATATCGATGCAGAACACATGGGTGACTTCCACAGGTA < 41bp 0.469246975922754 0.731689982407254 0.8397337 0.83224046 prediction 0.463379964814509 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1108134 chr20:1108135 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_114494 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350196 chr20:1108081-1108147
64251 chr13 28494600 28494600 1 + C A LUSC 28494599 + 28494579 28494619 41 GAGGGAGCCGAGCCGGGCGTCCTGGAGGAGCCCAACCGCGT GAGGGAGCCGAGCCGGGCGTCATGGAGGAGCCCAACCGCGT < 41bp 0.540044284138902 0.771732476096467 0.8856659 0.90295887 prediction 0.46337638391513 Functional Gain - PDX1 ENSG00000139515 CDS Human protein_coding chr13:28494599 chr13:28494600 nonsynonymous SNV 0.133 1 22 hm5C_associated_SNPs_114496 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr13:28494599-28494634
64251 chr4 151505111 151505111 1 + C A LUAD 151505107 + 151505087 151505127 41 CATCCTGCTGCAGCTCATCTCCTGCCTGCAGTGCCGCCGCT CATCCTGCTGCAGCTCATCTCCTGACTGCAGTGCCGCCGCT < 41bp 0.340152181448336 0.731673922287125 0.18960461 0.19825098 prediction 0.463347844574249 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151505107 chr4:151505111 stopgain 1.000 1 25 hm5C_associated_SNPs_114500 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585664 chr4:151505080-151505180
64251 chr11 376690 376690 1 + C T SKCM 376689 + 376669 376709 41 CCTGCAGTGGAGCAGCCGCCCCCAAAGGTGTACGTGACCAG CCTGCAGTGGAGCAGCCGCCCTCAAAGGTGTACGTGACCAG < 41bp 0.555688730694363 0.787351794692167 0.29408258 0.14778402 prediction 0.463326127995608 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:376689 chr11:376690 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_114503 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:376643-376698
64251 chr10 27462145 27462145 1 + C T rs147776224 27462144 + 27462124 27462164 41 TGATGGGCGAATTCTAGGAACCCCAGACTACCTTGCACCTG TGATGGGCGAATTCTAGGAACTCCAGACTACCTTGCACCTG < 41bp 0.594365159695137 0.826024199990244 0.37275124 0.9280391 prediction 0.463318080590214 Functional Gain - MASTL ENSG00000120539 CDS Human protein_coding chr10:27462144 chr10:27462145 synonymous SNV . 0 22 hm5C_associated_SNPs_114504 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:27462122-27462156
64251 chr4 166300192 166300192 1 + C G rs554021167 166300191 + 166300171 166300211 41 CCGTGGAGCCGCGGCTTTGCCCGTCTCCTCTGGGTGGCCCC CCGTGGAGCCGCGGCTTTGCCGGTCTCCTCTGGGTGGCCCC < 41bp 0.438649173408064 0.73165152259013 0.030260831 0.22803727 prediction 0.463303045180259 Functional Gain - CPE ENSG00000109472 UTR5 Human protein_coding chr4:166300191 chr4:166300192 . . 0 22 hm5C_associated_SNPs_114508 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr4:166300180-166300200
64251 chr16 2647748 2647748 1 + C G BLCA 2647747 + 2647727 2647767 41 AGGCAGCGATACCAGAGCCACCCGGACGCCGCTGTGCAGTG AGGCAGCGATACCAGAGCCACGCGGACGCCGCTGTGCAGTG < 41bp 0.419093217464288 0.731646514007072 0.48759258 0.8721851 prediction 0.463293028014144 Functional Gain - PDPK1 ENSG00000140992 CDS Human protein_coding chr16:2647747 chr16:2647748 nonsynonymous SNV 0.463 0 22 hm5C_associated_SNPs_114509 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr16:2647741-2647762
64251 chr6 116757924 116757924 1 + C T STAD 116757923 + 116757903 116757943 41 AAGCAGATACTGTCCCGAGTCCGGAACACAGCTAGCTTTAG AAGCAGATACTGTCCCGAGTCTGGAACACAGCTAGCTTTAG < 41bp 0.490494897422426 0.731644909066655 0.46146187 0.25251365 prediction 0.46328981813331 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116757923 chr6:116757924 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_114511 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:116757899-116757954
64251 chr12 56364837 56364837 1 + C T UCEC 56364836 + 56364816 56364856 41 CCCCATTTTCAGGTGACTCGCCGGGCCCTATTCCCTGGAGA CCCCATTTTCAGGTGACTCGCTGGGCCCTATTCCCTGGAGA < 41bp 0.506337420488414 0.73797082968155 0.9078654 0.8882526 prediction 0.463266818386273 Functional Gain - CDK2 ENSG00000123374 CDS Human protein_coding chr12:56364836 chr12:56364837 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_114519 0 0 16 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:56364830-56364852
64251 chr1 6649172 6649172 1 + C T SKCM 6649171 + 6649151 6649191 41 GCGGCCTGGCCTCCCAGCTCCCCGGCCAGAGACTGTGTGCA GCGGCCTGGCCTCCCAGCTCCTCGGCCAGAGACTGTGTGCA < 41bp 0.528215728380995 0.7598402116104 0.18332317 0.3154056 prediction 0.463248966458811 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6649171 chr1:6649172 nonsynonymous SNV 0.101 2 22 hm5C_associated_SNPs_114522 0 0 3 DDX55 POSTAR2 ENCODE chr1:6649127-6649175
64251 chr14 31348086 31348086 1 + A G UCEC 31348083 + 31348063 31348103 41 CCTGGTCGAGAAAACTATTCCTCAGTAGATGCCAATGGCAT CCTGGTCGAGAAAACTATTCCTCGGTAGATGCCAATGGCAT < 41bp 0.512165694790307 0.743789797418741 0.18582588 0.14204961 prediction 0.463248205256869 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31348083 chr14:31348086 synonymous SNV . 0 24 hm5C_associated_SNPs_114523 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:31348058-31348087
64251 chr12 57920532 57920532 1 + C T LUAD 57920531 + 57920511 57920551 41 CACTGAGTGGAGCTGGCTTCCCTGGGATGCTTGGGGCCTTG CACTGAGTGGAGCTGGCTTCCTTGGGATGCTTGGGGCCTTG < 41bp 0.525996230992604 0.757617231934476 0.8476467 0.729026 prediction 0.463242001883744 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920531 chr12:57920532 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_114525 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:57920506-57920535
64251 chr3 33840375 33840375 1 + C G rs550876351 33840371 + 33840351 33840391 41 AGGAGCTCAGCAAGCTGCGCCGCGCCGCAGTCGGTCGTCCG AGGAGCTCAGCAAGCTGCGCCGCGGCGCAGTCGGTCGTCCG < 41bp 0.461358356491898 0.731613368825434 0.2311795 0.3365443 prediction 0.463226737650867 Functional Gain - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33840371 chr3:33840375 nonsynonymous SNV 0.984 1 25 hm5C_associated_SNPs_114528 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr3:33840360-33840380
64251 chr5 76029085 76029085 1 + C A LUAD 76029084 + 76029064 76029104 41 ATTCCTTTCTCACACTTCCACCACAGAGGCTGCCTACTTTG ATTCCTTTCTCACACTTCCACAACAGAGGCTGCCTACTTTG < 41bp 0.488104203110689 0.731606630367773 0.028330356 0.082894385 prediction 0.463213260735545 Functional Gain - F2R ENSG00000181104 CDS Human protein_coding chr5:76029084 chr5:76029085 synonymous SNV . 0 22 hm5C_associated_SNPs_114529 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:76029024-76029088
64251 chr12 7046591 7046591 1 + C T rs181318837 7046590 + 7046570 7046610 41 GCCCCTGCCTCAGGGCCGCCCCTGAGCGCCACGCAGATCAA GCCCCTGCCTCAGGGCCGCCCTTGAGCGCCACGCAGATCAA < 41bp 0.491067822609614 0.731596958513455 0.3543364 0.37162676 prediction 0.46319391702691 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7046590 chr12:7046591 synonymous SNV . 0 22 hm5C_associated_SNPs_114533 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr12:7046576-7046614
64251 chr8 144682358 144682358 1 + C G rs143174212 144682357 + 144682337 144682377 41 TCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATC TCACATGCACTGGACGAGGGCGGAAACTCCTGTCTGCTATC < 41bp 0.473747323287399 0.731595358784623 0.1554955 0.46665156 prediction 0.463190717569247 Functional Gain - TIGD5 ENSG00000179886 UTR3 Human protein_coding chr8:144682357 chr8:144682358 . . 0 22 hm5C_associated_SNPs_114536 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:144682340-144682380
64251 chr10 103900141 103900141 1 + C T SKCM 103900140 + 103900120 103900160 41 TCAGAACTGGTTGAGCCTCTCCCGGCTGAGCCAGTGCTGAT TCAGAACTGGTTGAGCCTCTCTCGGCTGAGCCAGTGCTGAT < 41bp 0.536484132388166 0.768074449452547 0.5673145 0.34751093 prediction 0.463180634128762 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900140 chr10:103900141 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_114541 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:103900109-103900141
64251 chr17 80478021 80478021 1 + C G HNSC 80478020 + 80478000 80478040 41 ACCTCGAGATCTTCACGCCCCCGGGCGGCGGCGGCCATGGC ACCTCGAGATCTTCACGCCCCGGGGCGGCGGCGGCCATGGC < 41bp 0.638502705597781 0.870092166708647 0.33864605 0.7854154 prediction 0.463178922221732 Functional Gain - FOXK2 ENSG00000141568 CDS Human protein_coding chr17:80478020 chr17:80478021 nonsynonymous SNV 0.172 1 22 hm5C_associated_SNPs_114542 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:80477948-80478021
64251 chr12 124229490 124229490 1 + C T UCEC 124229489 + 124229469 124229509 41 CCAAGCATTCCTGGAGTGTTCCGAGGCCCTTATCCCCTTGG CCAAGCATTCCTGGAGTGTTCTGAGGCCCTTATCCCCTTGG < 41bp 0.519160175763189 0.75074446618274 0.860257 0.6603928 prediction 0.463168580839102 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124229489 chr12:124229490 stopgain 0.106 0 22 hm5C_associated_SNPs_114546 0 0 4 DDX24 POSTAR2 ENCODE chr12:124229432-124229510
64251 chr22 50636529 50636529 1 + C T rs562603797 50636528 + 50636508 50636548 41 GCCCAGGAAGTGCGTCCCCTCCGTGGTCGTGGGCGTCGTGG GCCCAGGAAGTGCGTCCCCTCTGTGGTCGTGGGCGTCGTGG < 41bp 0.509806559275829 0.741386376693736 0.22794232 0.08022502 prediction 0.463159634835814 Functional Gain - TRABD ENSG00000170638 CDS Human protein_coding chr22:50636528 chr22:50636529 synonymous SNV . 0 22 hm5C_associated_SNPs_114547 0 0 14 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:50636520-50636540
64251 chr1 10493961 10493961 1 + A G COAD 10493958 + 10493938 10493978 41 TGCGAGGAAGTTGCATTGGACAAAGAGATGCAGTTCAGCAA TGCGAGGAAGTTGCATTGGACAAGGAGATGCAGTTCAGCAA < 41bp 0.523909956865606 0.755484624439225 0.10619122 0.20759663 prediction 0.463149335147237 Functional Gain - CENPS;CENPS-CORT ENSG00000175279;ENSG00000251503 CDS Human other chr1:10493958 chr1:10493961 synonymous SNV . 0 24 hm5C_associated_SNPs_114549 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:10493935-10494010
64251 chr3 49569094 49569094 1 + C A UCEC 49569093 + 49569073 49569113 41 ATTCAAACCCCAACCCTAGGCCCCATCCAGCCTACTCGGGT ATTCAAACCCCAACCCTAGGCACCATCCAGCCTACTCGGGT < 41bp 0.493543937058916 0.731566466428923 0.06287065 0.06047401 prediction 0.463132932857846 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569093 chr3:49569094 nonsynonymous SNV 0.536 4 22 hm5C_associated_SNPs_114553 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49569028-49569117
64251 chr21 34602305 34602305 1 + C A rs17860115 34602301 + 34602281 34602321 41 CGCACTAAAGACGCTTCTTCCCGGCGGGTAGGAATCCCGCC CGCACTAAAGACGCTTCTTCCCGGAGGGTAGGAATCCCGCC < 41bp 0.673533649624505 0.905072414295263 0.9108485 0.9309051 prediction 0.463077529341515 Functional Gain - IFNAR2 ENSG00000159110 UTR5 Human protein_coding chr21:34602301 chr21:34602305 . . 0 25 hm5C_associated_SNPs_114564 0 0 4 DDX3X POSTAR2 ENCODE chr21:34602305-34602334
64251 chr2 224822353 224822353 1 + C G LUAD 224822352 + 224822332 224822372 41 AGCGCCTTCTGCGGTGCCCGCCGCCGCCCGTGCGCCGGTAG AGCGCCTTCTGCGGTGCCCGCGGCCGCCCGTGCGCCGGTAG < 41bp 0.633712328890903 0.86524906257991 0.38007358 0.8486513 prediction 0.463073467378014 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224822352 chr2:224822353 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_114566 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:224822327-224822357
64251 chr15 38756345 38756345 1 + T G UCEC 38756343 + 38756323 38756363 41 GTTAGGCTCTCAAATAAAATCATTATGCAACTTGGAAGAAA GTTAGGCTCTCAAATAAAATCAGTATGCAACTTGGAAGAAA < 41bp 0.408939864212429 0.73153286971187 0.21975699 0.42509115 prediction 0.463065739423741 Functional Gain - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38756343 chr15:38756345 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_114567 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:38756301-38756370
64251 chr17 38325653 38325653 1 + C T SKCM 38325652 + 38325632 38325672 41 TGCAGCCAAAGCCCTCCCCACCCCGGAGGACTCCCCAGCCA TGCAGCCAAAGCCCTCCCCACTCCGGAGGACTCCCCAGCCA < 41bp 0.603189450615028 0.834722290639864 0.07047266 0.10193172 prediction 0.463065680049672 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38325652 chr17:38325653 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_114568 0 0 1 ZRANB2 POSTAR2 ENCODE chr17:38325607-38325679
64251 chrX 54836447 54836447 1 + C T STAD 54836446 + 54836426 54836466 41 CCAAGAAACAGAATGCTGACCCGCAGGCTGTGACAATGCCT CCAAGAAACAGAATGCTGACCTGCAGGCTGTGACAATGCCT < 41bp 0.478585915645424 0.731521391467373 0.024235606 0.0868018 prediction 0.463042782934746 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836446 chrX:54836447 nonsynonymous SNV 0.323 0 22 hm5C_associated_SNPs_114573 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:54836444-54836473
64251 chr21 47660787 47660787 1 + A G LIHC 47660784 + 47660764 47660804 41 AAACACTGCGCCAAGAGCTCCTCAGCAGAAGCTCCTCGCAT AAACACTGCGCCAAGAGCTCCTCGGCAGAAGCTCCTCGCAT < 41bp 0.540484176723374 0.77200241701779 0.055668473 0.0616875 prediction 0.463036480588832 Functional Gain - MCM3AP ENSG00000160294 CDS Human protein_coding chr21:47660784 chr21:47660787 synonymous SNV . 0 24 hm5C_associated_SNPs_114575 0 0 1 DDX3X POSTAR2 ENCODE chr21:47660747-47660810
64251 chr9 35661081 35661081 1 - G A STAD 35661082 - 35661062 35661102 41 ACAGCCTGGCTGCACCTTCTCCGTAGTCCCCGCCCCACCTC ACAGCCTGGCTGCACCTTCTCTGTAGTCCCCGCCCCACCTC < 41bp 0.53109756381227 0.762612317363809 0.5293626 0.37600467 prediction 0.463029507103078 Functional Gain - CCDC107 ENSG00000159884 CDS Human protein_coding chr9:35661082 chr9:35661081 nonsynonymous SNV 0.837 4 22 hm5C_associated_SNPs_114578 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917666 chr9:35661079-35661104
64251 chr12 53666549 53666549 1 + C A UCEC 53666545 + 53666525 53666565 41 GCCTACAGCTTCTATAGTCACAAGCTCTATGCCGAGGCCTG GCCTACAGCTTCTATAGTCACAAGATCTATGCCGAGGCCTG < 41bp 0.328830671006186 0.731513592686127 0.24598098 0.7331991 prediction 0.463027185372254 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53666545 chr12:53666549 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_114579 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:53666545-53666599
64251 chr17 30696705 30696705 1 + C A UCEC 30696701 + 30696681 30696721 41 GGCAGGGACCGCCAATGGTGCCCCCTTACCAGGGTGGGCCT GGCAGGGACCGCCAATGGTGCCCCATTACCAGGGTGGGCCT < 41bp 0.307410019714192 0.731510654159453 0.032099307 0.017487288 prediction 0.463021308318906 Functional Gain - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30696701 chr17:30696705 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_114580 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:30696687-30696714
64251 chr16 847080 847080 1 + C T SKCM 847079 + 847059 847099 41 GCACATCATGAGGCGAGCGGCCCGGGAGGAACAGGTGTGGA GCACATCATGAGGCGAGCGGCTCGGGAGGAACAGGTGTGGA < 41bp 0.530272947178946 0.761779420753893 0.29189387 0.27348804 prediction 0.463012947149893 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847079 chr16:847080 synonymous SNV . 0 22 hm5C_associated_SNPs_114584 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:847046-847084
64251 chr3 107435518 107435518 1 + C T STAD 107435517 + 107435497 107435537 41 AAACTGAAGATGATGAATCACCAGAGCAGCGAGCCCGGAGA AAACTGAAGATGATGAATCACTAGAGCAGCGAGCCCGGAGA < 41bp 0.564107189402676 0.795603939444017 0.176135 0.102994174 prediction 0.462993500082682 Functional Gain - BBX ENSG00000114439 CDS Human protein_coding chr3:107435517 chr3:107435518 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_114587 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:107435481-107435519
64251 chr18 29121270 29121270 1 + A G LGG 29121267 + 29121247 29121287 41 GAATAATGAAGGAGCACCACCTGAAGACAAGGTCAGTGGAT GAATAATGAAGGAGCACCACCTGGAGACAAGGTCAGTGGAT < 41bp 0.528176143513015 0.759667593620516 0.2665903 0.43038422 prediction 0.462982900215002 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29121267 chr18:29121270 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_114590 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29121247-29121272
64251 chr4 52752797 52752797 1 + C T LUAD 52752796 + 52752776 52752816 41 GTGAAGACATTGGTGTTGAACCAGAAAACGTGAGTCAAACT GTGAAGACATTGGTGTTGAACTAGAAAACGTGAGTCAAACT < 41bp 0.525714030261105 0.757201313033066 0.20834261 0.07167509 prediction 0.462974565543922 Functional Gain - DCUN1D4 ENSG00000109184 CDS Human protein_coding chr4:52752796 chr4:52752797 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_114592 0 0 10 BUD13 POSTAR2 ENCODE chr4:52752766-52752870
64251 chr1 25633115 25633115 1 + C A rs200415166 25633114 + 25633094 25633134 41 GTAACCGAGTGCTGGGGATTCCCCACAGCTCCATCATGGGC GTAACCGAGTGCTGGGGATTCACCACAGCTCCATCATGGGC < 41bp 0.539624681090514 0.771111128234891 0.18931031 0.37196457 prediction 0.462972894288755 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25633114 chr1:25633115 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_114593 0 0 1 SND1 POSTAR2 ENCODE chr1:25633088-25633135
64251 chr20 3782665 3782665 1 + C T COAD 3782664 + 3782644 3782684 41 TCCTCAAGAGGCTGGAGCGGCCCCAGGACAGGGACACGCCC TCCTCAAGAGGCTGGAGCGGCTCCAGGACAGGGACACGCCC < 41bp 0.595708795462192 0.827194308429423 0.21365738 0.89752614 prediction 0.462971025934461 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3782664 chr20:3782665 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_114594 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3782660-3782680
64251 chr12 72278745 72278745 1 + T C UCEC 72278743 + 72278723 72278763 41 TTCTCCCTGCTCTACACTTTCATCAAGGAGATAGCAAACTA TTCTCCCTGCTCTACACTTTCACCAAGGAGATAGCAAACTA < 41bp 0.431411566706871 0.731485043929572 0.04935068 0.123288184 prediction 0.462970087859144 Functional Gain - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72278743 chr12:72278745 synonymous SNV . 0 23 hm5C_associated_SNPs_114595 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr12:72278721-72278751
64251 chr1 46714224 46714224 1 + C A KIRC 46714223 + 46714203 46714243 41 GCCAGCTGGCCAAGAGAAAACCTGAAGGCAGGTCCTGTGAT GCCAGCTGGCCAAGAGAAAACATGAAGGCAGGTCCTGTGAT < 41bp 0.584016982135011 0.815501861181863 0.16649085 0.2455293 prediction 0.462969758093702 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46714223 chr1:46714224 nonsynonymous SNV 0.178 1 22 hm5C_associated_SNPs_114596 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:46714198-46714230
64251 chr15 77759508 77759508 1 + C A KIRP 77759504 + 77759484 77759524 41 ACCTCTTCGAGACAGCAATGCACCCAAATCCCCCCTTACAG ACCTCTTCGAGACAGCAATGCACCAAAATCCCCCCTTACAG < 41bp 0.293135190012359 0.731475686158249 0.005794853 0.015551597 prediction 0.462951372316498 Functional Gain - HMG20A ENSG00000140382 CDS Human protein_coding chr15:77759504 chr15:77759508 synonymous SNV . 0 25 hm5C_associated_SNPs_114599 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr15:77759503-77759524
64251 chr2 65217234 65217234 1 + C A UCEC 65217230 + 65217210 65217250 41 GCGCAGACCCTTCAGTCCAGCGACCTGGGGCTGGAGGACTC GCGCAGACCCTTCAGTCCAGCGACATGGGGCTGGAGGACTC < 41bp 0.343518919981862 0.731457866958431 0.68591547 0.6512232 prediction 0.462915733916863 Functional Gain - SLC1A4 ENSG00000115902 CDS Human protein_coding chr2:65217230 chr2:65217234 nonsynonymous SNV 0.952 0 25 hm5C_associated_SNPs_114604 0 0 4 RPS3 POSTAR2 ENCODE chr2:65217219-65217284
64251 chr17 21215489 21215489 1 + C T SKCM 21215488 + 21215468 21215508 41 CCTGCGGTTCCCTTACGAGTCCTGGGGGACCCCGTTCCAGC CCTGCGGTTCCCTTACGAGTCTTGGGGGACCCCGTTCCAGC < 41bp 0.477331854763436 0.731455717087855 0.28901514 0.27835593 prediction 0.46291143417571 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21215488 chr17:21215489 synonymous SNV . 0 22 hm5C_associated_SNPs_114605 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:21215481-21215513
64251 chr5 128448845 128448845 1 + C A rs181375321 128448841 + 128448821 128448861 41 CGCCTCCTAGTGAAACTTAACCAGCTAGACCATTTGAGTAC CGCCTCCTAGTGAAACTTAACCAGATAGACCATTTGAGTAC < 41bp 0.34721598747315 0.731450125180951 0.15274772 0.3355499 prediction 0.462900250361902 Functional Gain - ISOC1 ENSG00000066583 UTR3 Human protein_coding chr5:128448841 chr5:128448845 . . 0 25 hm5C_associated_SNPs_114608 0 0 7 CSTF2T POSTAR2 GSE37401,GSM917677 chr5:128448775-128448851
64251 chr16 15122812 15122812 1 + C G rs112323280 15122808 + 15122788 15122828 41 CGGGAGAGGCACTCGTGTGACGCGCTGAATCGCTGGGTGAG CGGGAGAGGCACTCGTGTGACGCGGTGAATCGCTGGGTGAG < 41bp 0.620817692725549 0.852264683805611 0.15941712 0.6235385 prediction 0.462893982160125 Functional Gain - PDXDC1 ENSG00000179889 CDS Human protein_coding chr16:15122808 chr16:15122812 nonsynonymous SNV 0.279 0 25 hm5C_associated_SNPs_114610 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:15122787-15122817
64251 chr8 21890671 21890671 1 + C T LUAD 21890670 + 21890650 21890690 41 GTAGGAGTGCAGCTTTCTCCCCCAGTTACTTTCCAGCTCCG GTAGGAGTGCAGCTTTCTCCCTCAGTTACTTTCCAGCTCCG < 41bp 0.489158685524735 0.73144421173271 0.12605938 0.0691973 prediction 0.462888423465419 Functional Gain - NPM2 ENSG00000158806 CDS Human protein_coding chr8:21890670 chr8:21890671 nonsynonymous SNV 0.977 2 22 hm5C_associated_SNPs_114612 0 0 1 U2AF2 POSTAR2 ENCODE chr8:21890625-21890671
64251 chr9 96421820 96421820 1 + C T GBM 96421819 + 96421799 96421839 41 GCAGAGCATGAGGACGAGCTCCCGGAGCACTTCAAACCTTC GCAGAGCATGAGGACGAGCTCTCGGAGCACTTCAAACCTTC < 41bp 0.580760267788126 0.812193185467281 0.4138394 0.38158047 prediction 0.462865835358309 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96421819 chr9:96421820 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_114614 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:96421793-96421831
64251 chr15 65856658 65856658 1 + C T SKCM 65856657 + 65856637 65856677 41 CAATTGGAGTCACTACGTCACCGGTGCTGCCTTCTCTGATC CAATTGGAGTCACTACGTCACTGGTGCTGCCTTCTCTGATC < 41bp 0.523653878770662 0.755083986424351 0.104685575 0.31571063 prediction 0.462860215307378 Functional Gain - HACD3 ENSG00000074696 CDS Human protein_coding chr15:65856657 chr15:65856658 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_114615 0 0 14 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:65856642-65856663
64251 chr19 4929348 4929348 1 + C G DLBC 4929344 + 4929324 4929364 41 AGCACCAAGGAGCGGGACTCCGAGCTCTCCGACACCGACTC AGCACCAAGGAGCGGGACTCCGAGGTCTCCGACACCGACTC < 41bp 0.630459050791981 0.861888800729817 0.537726 0.8940866 prediction 0.462859499875671 Functional Gain - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4929344 chr19:4929348 . 0.045 3 25 hm5C_associated_SNPs_114616 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:4929330-4929365
64251 chr15 43692279 43692279 1 + C T SKCM 43692278 + 43692258 43692298 41 AAGTACTTACTGAGTGTGCGCCGGGTGCAAGCTGAGCTGCA AAGTACTTACTGAGTGTGCGCTGGGTGCAAGCTGAGCTGCA < 41bp 0.512503737289555 0.743930383219619 0.90701604 0.4601186 prediction 0.462853291860128 Functional Gain - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43692278 chr15:43692279 nonsynonymous SNV 0.755 4 22 hm5C_associated_SNPs_114617 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:43692247-43692284
64251 chr15 96877674 96877674 1 + C G HNSC 96877670 + 96877650 96877690 41 CCCTCCACGTCGCCCCGCTCCTGGCCGCCGCCGGCCTGCAT CCCTCCACGTCGCCCCGCTCCTGGGCGCCGCCGGCCTGCAT < 41bp 0.614619355412897 0.846034777990047 0.40776792 0.845436 prediction 0.462830845154301 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877670 chr15:96877674 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_114621 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:96877660-96877680
64251 chr20 62655955 62655955 1 + A G BRCA 62655952 + 62655932 62655972 41 GAGGGCTGTGGCCCACTGCCCCAAAGCAGAGGTGCTGTGGC GAGGGCTGTGGCCCACTGCCCCAGAGCAGAGGTGCTGTGGC < 41bp 0.483085603526523 0.731414845536901 0.09524259 0.33768404 prediction 0.462829691073802 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62655952 chr20:62655955 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_114622 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:62655954-62655955
64251 chr9 108467964 108467964 1 + C G BLCA 108467960 + 108467940 108467980 41 TTTGGTGGAGGAATTTTATCCTGTCTACTGCTTGCAGAGCC TTTGGTGGAGGAATTTTATCCTGTGTACTGCTTGCAGAGCC < 41bp 0.453080620795213 0.731412633988467 0.26625812 0.35834157 prediction 0.462825267976934 Functional Gain - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108467960 chr9:108467964 nonsynonymous SNV 0.928 0 25 hm5C_associated_SNPs_114623 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:108467951-108468028
64251 chr6 119229116 119229116 1 + C G rs565738786 119229112 + 119229092 119229132 41 GTAAAGATGTCTTGGCCTCCCAGACAGTCTTTGGACCACTA GTAAAGATGTCTTGGCCTCCCAGAGAGTCTTTGGACCACTA < 41bp 0.452276849927435 0.731412259256374 0.11038372 0.33067316 prediction 0.462824518512749 Functional Gain - ASF1A ENSG00000111875 UTR3 Human protein_coding chr6:119229112 chr6:119229116 . . 0 25 hm5C_associated_SNPs_114624 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:119229079-119229128
64251 chr17 40931001 40931001 1 + C G LUAD 40930997 + 40930977 40931017 41 TTCCACGGGCTGGATGAAGCCACTCTACTGCGGGCTCTGCA TTCCACGGGCTGGATGAAGCCACTGTACTGCGGGCTCTGCA < 41bp 0.456231019706724 0.731405006454075 0.792897 0.4043557 prediction 0.462810012908151 Functional Gain - VPS25 ENSG00000131475 CDS Human protein_coding chr17:40930997 chr17:40931001 nonsynonymous SNV 0.988 2 25 hm5C_associated_SNPs_114627 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:40930976-40931028
64251 chr6 44122487 44122487 1 + C T SKCM 44122486 + 44122466 44122506 41 ACGGGGATGGGGATGGGGCTCCTGGGAGCTCAGGGGATGAG ACGGGGATGGGGATGGGGCTCTTGGGAGCTCAGGGGATGAG < 41bp 0.493743644086691 0.731391131705604 0.59080315 0.37878639 prediction 0.462782263411208 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44122486 chr6:44122487 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_114635 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44122453-44122498
64251 chr1 32697071 32697071 1 + C A rs1137947 32697070 + 32697050 32697090 41 TCATTGCACTCCATCCTGAGCCACAAGAGCAAAACTCCGTC TCATTGCACTCCATCCTGAGCAACAAGAGCAAAACTCCGTC < 41bp 0.521485260703572 0.752859099481976 0.2538724 0.20788941 prediction 0.462747677556809 Functional Gain - EIF3I ENSG00000084623 UTR3 Human protein_coding chr1:32697070 chr1:32697071 . . 0 22 hm5C_associated_SNPs_114639 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32697038-32697073
64251 chr12 662717 662717 1 + A G BLCA 662714 + 662694 662734 41 GCACCCTGTGAAGAACCTGCCTCAGATGAGGGGGCCCAGGC GCACCCTGTGAAGAACCTGCCTCGGATGAGGGGGCCCAGGC < 41bp 0.537957136736048 0.76931964332605 0.2126422 0.34264335 prediction 0.462725013180004 Functional Gain - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:662714 chr12:662717 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_114641 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:662716-662717
64251 chr22 40802592 40802592 1 + C T UCEC 40802591 + 40802571 40802611 41 GTGGCCGTGGAGACTCAGCGCCGCAAGCACCTGGCCTATCT GTGGCCGTGGAGACTCAGCGCTGCAAGCACCTGGCCTATCT < 41bp 0.565153085375853 0.796510531456844 0.31648988 0.1830656 prediction 0.462714892161983 Functional Gain - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40802591 chr22:40802592 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_114643 0 0 1 SRSF1 POSTAR2 ENCODE chr22:40802529-40802602
64251 chrX 155255062 155255062 1 + C G ACC 155255061 + 155255041 155255081 41 GGGCTCCATGACACCTTCCCCCCCAGACCCAGACTTGGGCT GGGCTCCATGACACCTTCCCCGCCAGACCCAGACTTGGGCT < 41bp 0.431593887554735 0.731342209776888 0.037997246 0.68081856 prediction 0.462684419553777 Functional Gain - DDX11L16 ENSG00000182484;ENSG00000270726 ncRNA_exonic Human other chrX:155255061 chrX:155255062 . . 0 22 hm5C_associated_SNPs_114648 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:155255046-155255084
64251 chr14 20924986 20924986 1 + C T HNSC 20924985 + 20924965 20925005 41 AGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGT AGTGGCGTGGGCCTGCTTTCCTGCCAGTGCCCACTCAAAGT < 41bp 0.478241258026613 0.73133445569839 0.10186681 0.15440086 prediction 0.46266891139678 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20924985 chr14:20924986 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_114651 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr14:20924961-20924987
64251 chr11 10794110 10794110 1 + C T HNSC 10794109 + 10794089 10794129 41 CAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGA CAGGCCCAGTACCATGTGGCCTGGGCACGCAAACAAGATGA < 41bp 0.541439826853584 0.77276947141247 0.40424174 0.16365725 prediction 0.46265928911777 Functional Gain - CTR9 ENSG00000198730 CDS Human protein_coding chr11:10794109 chr11:10794110 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_114652 0 0 7 LIN28B POSTAR2 GSE44616,GSM1087851 chr11:10794097-10794117
64251 chr17 33288611 33288611 1 + C G rs150545286 33288607 + 33288587 33288627 41 TGGCGTCCTCCGCCTCCGCCCGGACTCCGGCAGGGAAGCGA TGGCGTCCTCCGCCTCCGCCCGGAGTCCGGCAGGGAAGCGA < 41bp 0.602141616945942 0.833454477369903 0.3212034 0.89889944 prediction 0.462625720847922 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33288607 chr17:33288611 nonsynonymous SNV 0.040 0 25 hm5C_associated_SNPs_114659 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:33288583-33288619
64251 chr17 61908717 61908717 1 + C A UCEC 61908716 + 61908696 61908736 41 GCTACTAATAGGATTGATATCCTGGACTCGGCACTGCTTCG GCTACTAATAGGATTGATATCATGGACTCGGCACTGCTTCG < 41bp 0.469961387593522 0.73129504696373 0.4195808 0.64836776 prediction 0.462590093927459 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908716 chr17:61908717 nonsynonymous SNV 0.991 5 22 hm5C_associated_SNPs_114663 0 0 24 NUDT21 POSTAR2 GSE37401,GSM917662 chr17:61908680-61908720
64251 chr19 1038862 1038862 1 + C G rs1141561 1038858 + 1038838 1038878 41 GCTGAGATTACAGGTGTGAGCCACCGTGCCCAGCCCCTCAG GCTGAGATTACAGGTGTGAGCCACGGTGCCCAGCCCCTCAG < 41bp 0.560266898599319 0.791558421760195 0.16156569 0.24283198 prediction 0.462583046321752 Functional Gain - CNN2 ENSG00000267020 ncRNA_exonic Human other chr19:1038858 chr19:1038862 . . 0 25 hm5C_associated_SNPs_114666 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr19:1038860-1038881
64251 chr17 41345151 41345151 1 + A G UCEC 41345148 + 41345128 41345168 41 GTACCTCCGTTATGCCAATGCTCAGTGCAGCATTTGTGGAT GTACCTCCGTTATGCCAATGCTCGGTGCAGCATTTGTGGAT < 41bp 0.530897289712811 0.762180903840169 0.26179022 0.220904 prediction 0.462567228254716 Functional Gain - NBR1 ENSG00000188554 CDS Human protein_coding chr17:41345148 chr17:41345151 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_114669 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:41345151-41345187
64251 chr17 70120416 70120416 1 + A G STAD 70120413 + 70120393 70120433 41 CTTCACCTACATGAACCCCGCTCAGCGCCCCATGTACACCC CTTCACCTACATGAACCCCGCTCGGCGCCCCATGTACACCC < 41bp 0.526002928838967 0.757256481430513 0.018602073 0.039043993 prediction 0.462507105183094 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70120413 chr17:70120416 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_114682 1 0 4 IGF2BP1 POSTAR2 ENCODE chr17:70120401-70120454
64251 chr3 23997604 23997604 1 + C A rs61732085 23997600 + 23997580 23997620 41 ATTCCACTATGGAGTTCATGCTTGCGAAGGCTGTAAGGTAA ATTCCACTATGGAGTTCATGCTTGAGAAGGCTGTAAGGTAA < 41bp 0.330822405804819 0.731244501874001 0.02982226 0.072508186 prediction 0.462489003748003 Functional Gain - NR1D2 ENSG00000174738 CDS Human protein_coding chr3:23997600 chr3:23997604 stopgain 0.988 1 25 hm5C_associated_SNPs_114685 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:23997559-23997605
64251 chr13 28712689 28712689 1 + C G rs138028125 28712688 + 28712668 28712708 41 AGCGGGACAGACCCACCCGCCCAGGCTTTTATCCGGCACCG AGCGGGACAGACCCACCCGCCGAGGCTTTTATCCGGCACCG < 41bp 0.621471491620529 0.852708445968402 0.14062846 0.5050477 prediction 0.462473908695745 Functional Gain - PAN3-AS1 ENSG00000152520 UTR5 Human protein_coding chr13:28712688 chr13:28712689 . . 0 22 hm5C_associated_SNPs_114689 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr13:28712680-28712700
64251 chr17 42733923 42733923 1 + C A rs538358085 42733919 + 42733899 42733939 41 AGGGAGCCGGGCCTGGACGCCCCCCCCATCACCCCCGTACC AGGGAGCCGGGCCTGGACGCCCCCACCATCACCCCCGTACC < 41bp 0.418206994510842 0.73123502102387 0.24730435 0.34753686 prediction 0.462470042047741 Functional Gain - MEIOC ENSG00000180336 UTR5 Human protein_coding chr17:42733919 chr17:42733923 . . 0 25 hm5C_associated_SNPs_114692 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:42733914-42733943
64251 chr11 125447457 125447457 1 + C T UCEC 125447456 + 125447436 125447476 41 GTGCTTCAGTCGGTAACAGCCCGAATTATCGGTAAGTGTAT GTGCTTCAGTCGGTAACAGCCTGAATTATCGGTAAGTGTAT < 41bp 0.484426417308965 0.731229312890345 0.06947774 0.07629049 prediction 0.462458625780689 Functional Gain - EI24 ENSG00000149547 CDS Human protein_coding chr11:125447456 chr11:125447457 stopgain 0.681 1 22 hm5C_associated_SNPs_114695 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:125447418-125447457
64251 chr1 9661308 9661308 1 + C A GBM 9661304 + 9661284 9661324 41 GCACCACTGTGCCCCTGGCCCTGCCACCTGGTGGCAATGGC GCACCACTGTGCCCCTGGCCCTGCAACCTGGTGGCAATGGC < 41bp 0.295179756720855 0.731227928268982 0.23013881 0.36976802 prediction 0.462455856537965 Functional Gain - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9661304 chr1:9661308 nonsynonymous SNV 0.980 2 25 hm5C_associated_SNPs_114696 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:9661271-9661328
64251 chr4 88903651 88903651 1 + A G UCEC 88903648 + 88903628 88903668 41 TTGTGCCGTGATTCAGTACCCTGATGCTACAGACGAGGACA TTGTGCCGTGATTCAGTACCCTGGTGCTACAGACGAGGACA < 41bp 0.510887108391768 0.742112453935766 0.30849996 0.2725578 prediction 0.462450691087997 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903648 chr4:88903651 nonsynonymous SNV 0.601 0 24 hm5C_associated_SNPs_114697 0 0 4 GRWD1 POSTAR2 ENCODE chr4:88903643-88903661
64251 chr19 1049343 1049343 1 + C T LUSC 1049342 + 1049322 1049362 41 AGAAGCGCTTTCCTGGAAGCCCGCAGCCAGCCCTGCGGGGG AGAAGCGCTTTCCTGGAAGCCTGCAGCCAGCCCTGCGGGGG < 41bp 0.542594150351557 0.773800982678595 0.67311484 0.747877 prediction 0.462413664654076 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1049342 chr19:1049343 nonsynonymous SNV 0.010 1 22 hm5C_associated_SNPs_114707 0 0 1 SRSF1 POSTAR2 ENCODE chr19:1049324-1049366
64251 chr19 50905494 50905494 1 + C T SKCM 50905493 + 50905473 50905513 41 TACCACGGGCACGGCCCCTCCCCGTTCCTGCGCATCACCGT TACCACGGGCACGGCCCCTCCTCGTTCCTGCGCATCACCGT < 41bp 0.482755954352891 0.731202752174113 0.13517985 0.23289847 prediction 0.462405504348227 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905493 chr19:50905494 nonsynonymous SNV 0.104 0 22 hm5C_associated_SNPs_114708 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:50905473-50905496
64251 chrX 48386663 48386663 1 + C T COAD 48386662 + 48386642 48386682 41 CTCTACTTCCTGACAGAGCACCGCGACGGATTCCAGCACGG CTCTACTTCCTGACAGAGCACTGCGACGGATTCCAGCACGG < 41bp 0.497664728206053 0.731202515667238 0.2892651 0.17913675 prediction 0.462405031334477 Functional Gain - EBP ENSG00000147155 CDS Human protein_coding chrX:48386662 chrX:48386663 nonsynonymous SNV 0.004 4 22 hm5C_associated_SNPs_114709 3 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:48386644-48386689
64251 chr18 29125751 29125751 1 + A G UCEC 29125748 + 29125728 29125768 41 AGATTGCCTTCTGGTTTATTCTCAGGAAGAAACTGAATCGC AGATTGCCTTCTGGTTTATTCTCGGGAAGAAACTGAATCGC < 41bp 0.51498015834274 0.746179833271918 0.031189322 0.1584621 prediction 0.462399349858356 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29125748 chr18:29125751 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_114712 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr18:29125727-29125752
64251 chr19 48287825 48287825 1 + C A rs11551811 48287824 + 48287804 48287844 41 CTGGAGTTTGGGGGGACATCCCGCCTCAGGCATCCTTCTCA CTGGAGTTTGGGGGGACATCCAGCCTCAGGCATCCTTCTCA < 41bp 0.48898165951054 0.731190223516902 0.13667345 0.5160485 prediction 0.462380447033804 Functional Gain - SELENOW ENSG00000178980 UTR3 Human protein_coding chr19:48287824 chr19:48287825 . . 0 22 hm5C_associated_SNPs_114715 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48287761-48287842
64251 chr2 239308280 239308280 1 + C A rs11895642 239308279 + 239308259 239308299 41 ACATACATCCTCACTTTCTTCCGCAGTTTACCCTGGTTTTC ACATACATCCTCACTTTCTTCAGCAGTTTACCCTGGTTTTC < 41bp 0.56716747918851 0.798356547484056 0.570329 0.42838705 prediction 0.462378136591093 Functional Gain - TRAF3IP1 ENSG00000204104 UTR3 Human protein_coding chr2:239308279 chr2:239308280 . . 0 22 hm5C_associated_SNPs_114716 0 0 3 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:239308258-239308281
64251 chr19 14029358 14029358 1 + C T SKCM 14029357 + 14029337 14029377 41 GGCCCTGAGCCGGGGTGAGCCCGTGGACCTCTCCTGCCTGC GGCCCTGAGCCGGGGTGAGCCTGTGGACCTCTCCTGCCTGC < 41bp 0.515960625443688 0.747147540610342 0.8173877 0.5321798 prediction 0.462373830333308 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14029357 chr19:14029358 synonymous SNV . 0 22 hm5C_associated_SNPs_114717 0 0 1 DDX24 POSTAR2 ENCODE chr19:14029344-14029373
64251 chr6 35259397 35259397 1 + C T rs33959228 35259396 + 35259376 35259416 41 TCCTTCACCACATCTAACATCCGCAAGGTACATGTGCGCAC TCCTTCACCACATCTAACATCTGCAAGGTACATGTGCGCAC < 41bp 0.57590050713517 0.807082536356539 0.20084089 0.2900923 prediction 0.46236405844274 Functional Gain - ZNF76 ENSG00000065029 CDS Human protein_coding chr6:35259396 chr6:35259397 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_114721 0 1 1 GRWD1 POSTAR2 ENCODE chr6:35259364-35259429
64251 chr15 99473511 99473511 1 + C T SKCM 99473510 + 99473490 99473530 41 TGCTGTATGCCTCTGTGAACCCGGAGTACTTCAGCGCTGCT TGCTGTATGCCTCTGTGAACCTGGAGTACTTCAGCGCTGCT < 41bp 0.55701333116509 0.788194700950887 0.89411974 0.86573213 prediction 0.462362739571594 Functional Gain - IGF1R ENSG00000140443 CDS Human protein_coding chr15:99473510 chr15:99473511 nonsynonymous SNV 0.983 5 22 hm5C_associated_SNPs_114722 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:99473486-99473516
64251 chr16 77233338 77233338 1 + C G rs8398 77233337 + 77233317 77233357 41 GCGAGGCTCGCGCGCAGGCCCCGCGTTGGAAAATGGCGGGG GCGAGGCTCGCGCGCAGGCCCGGCGTTGGAAAATGGCGGGG < 41bp 0.582284168845936 0.813460271225073 0.05005768 0.24445134 prediction 0.462352204758273 Functional Gain - SYCE1L;MON1B ENSG00000205078;ENSG00000103111 UTR5;UTR3 Human other chr16:77233337 chr16:77233338 . . 0 22 hm5C_associated_SNPs_114724 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:77233331-77233376
64251 chr15 74287172 74287172 1 + C A rs574579963 74287168 + 74287148 74287188 41 GGGTCCATGGAGCCTGCACCCGCCCGATCTCCGAGGCCCCA GGGTCCATGGAGCCTGCACCCGCCAGATCTCCGAGGCCCCA < 41bp 0.364247812332852 0.731153779304297 0.097836345 0.48603952 prediction 0.462307558608595 Functional Gain - PML ENSG00000140464 CDS Human protein_coding chr15:74287168 chr15:74287172 synonymous SNV . 0 25 hm5C_associated_SNPs_114731 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr15:74287160-74287180
64251 chr19 33463214 33463214 1 + C G rs79371948 33463210 + 33463190 33463230 41 AGACTGGGACGGTGGGGTTCCTGCCGGCTGTATTCGGGCCT AGACTGGGACGGTGGGGTTCCTGCGGGCTGTATTCGGGCCT < 41bp 0.574107223877618 0.805255884495765 0.70589405 0.9105252 prediction 0.462297321236293 Functional Gain - FAAP24 ENSG00000131944 UTR5 Human protein_coding chr19:33463210 chr19:33463214 . . 0 25 hm5C_associated_SNPs_114732 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:33463212-33463232
64251 chr9 115249281 115249281 1 + C A rs567309161 115249280 + 115249260 115249300 41 TTTGGTGCCCGGCCCTCTGGCCGCTCTCCTCCCGCCCTCGC TTTGGTGCCCGGCCCTCTGGCAGCTCTCCTCCCGCCCTCGC < 41bp 0.514537338343914 0.745668772917059 0.12035081 0.229541 prediction 0.462262869146289 Functional Gain - C9orf147;KIAA1958 ENSG00000230185 CDS Human antisense chr9:115249280 chr9:115249281 unknown . 0 22 hm5C_associated_SNPs_114734 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:115249221-115249298
64251 chr8 81399761 81399761 1 + C A LUAD 81399757 + 81399737 81399777 41 TCCAGCACTTCCCGCTCGCGCGGCCCAAGTCTCTAATGCAG TCCAGCACTTCCCGCTCGCGCGGCACAAGTCTCTAATGCAG < 41bp 0.333374573826873 0.73112115394323 0.58624333 0.5013511 prediction 0.46224230788646 Functional Gain - ZBTB10 ENSG00000205189 CDS Human protein_coding chr8:81399757 chr8:81399761 nonsynonymous SNV 0.994 1 25 hm5C_associated_SNPs_114739 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:81399728-81399766
64251 chr3 9776140 9776140 1 + C T LIHC 9776139 + 9776119 9776159 41 GTGGAGGTGGACTTGCATGGCCGCGTCCACCGCATCAGCAT GTGGAGGTGGACTTGCATGGCTGCGTCCACCGCATCAGCAT < 41bp 0.483938585470102 0.731116154306477 0.04341477 0.033558726 prediction 0.462232308612955 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9776139 chr3:9776140 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_114743 0 0 1 RBM15 POSTAR2 ENCODE chr3:9776105-9776170
64251 chr19 47506126 47506126 1 + C A rs10410262 47506122 + 47506102 47506142 41 CGATTCCACAGATGTATGTGCGGCCAGTGACTTCCCCAGGA CGATTCCACAGATGTATGTGCGGCAAGTGACTTCCCCAGGA < 41bp 0.371289564500469 0.731113694225932 0.40543872 0.44252518 prediction 0.462227388451864 Functional Gain - ARHGAP35 ENSG00000160007 UTR3 Human protein_coding chr19:47506122 chr19:47506126 . . 0 25 hm5C_associated_SNPs_114744 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:47506115-47506140
64251 chr8 145583638 145583638 1 + C T SKCM 145583637 + 145583617 145583657 41 CCTGCTGCCCTGCGTGCTGGCCCTAGTGCAGGGTGTGGGCC CCTGCTGCCCTGCGTGCTGGCTCTAGTGCAGGGTGTGGGCC < 41bp 0.554734582294538 0.785838215062018 0.08952814 0.36461365 prediction 0.46220726553496 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583637 chr8:145583638 synonymous SNV . 0 22 hm5C_associated_SNPs_114746 0 0 3 GEMIN5 POSTAR2 ENCODE chr8:145583596-145583650
64251 chr13 113773141 113773141 1 + C A BLCA 113773140 + 113773120 113773160 41 GCAAGGGGGACAGTGGAGGCCCACATGCCACCCACTACCGG GCAAGGGGGACAGTGGAGGCCAACATGCCACCCACTACCGG < 41bp 0.565202387989379 0.796296240980153 0.07801658 0.15888104 prediction 0.462187705981548 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113773140 chr13:113773141 nonsynonymous SNV 0.273 5 22 hm5C_associated_SNPs_114748 0 0 4 DDX55 POSTAR2 ENCODE chr13:113773096-113773212
64251 chr1 150484952 150484952 1 + C T LUAD 150484951 + 150484931 150484971 41 TTGCCCGTCGGGCTCCTTACCCCAACTATGACCGGGACATC TTGCCCGTCGGGCTCCTTACCTCAACTATGACCGGGACATC < 41bp 0.597790679084028 0.828875928543688 0.2326093 0.16890419 prediction 0.462170498919319 Functional Gain - ECM1 ENSG00000143369 CDS Human protein_coding chr1:150484951 chr1:150484952 nonsynonymous SNV 0.854 5 22 hm5C_associated_SNPs_114751 0 0 2 SND1 POSTAR2 ENCODE chr1:150484849-150485007
64251 chr20 57599308 57599308 1 + C A THYM 57599307 + 57599287 57599327 41 GGCTTTGCCCCACTCACGGCCCAGGGCAGCCAGCAGTACCG GGCTTTGCCCCACTCACGGCCAAGGGCAGCCAGCAGTACCG < 41bp 0.5765322827333 0.807616213279952 0.13358408 0.4962476 prediction 0.462167861093304 Functional Gain - TUBB1 ENSG00000101162 CDS Human protein_coding chr20:57599307 chr20:57599308 nonsynonymous SNV 0.235 1 22 hm5C_associated_SNPs_114754 0 0 1 RPS5 POSTAR2 ENCODE chr20:57599273-57599319
64251 chr1 6680349 6680349 1 + C T SKCM 6680348 + 6680328 6680368 41 CAGGGAAAGCAGGTGGTGTTCCGAGATGAGGACAGCACTGG CAGGGAAAGCAGGTGGTGTTCTGAGATGAGGACAGCACTGG < 41bp 0.530745469379389 0.761826996395671 0.80470407 0.40859303 prediction 0.462163054032563 Functional Gain - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6680348 chr1:6680349 stopgain 0.997 1 22 hm5C_associated_SNPs_114756 0 0 3 GRWD1 POSTAR2 ENCODE chr1:6680217-6680379
64251 chr7 107217905 107217905 1 + T C rs562975630 107217903 + 107217883 107217923 41 TTCCATCAACATTTAATGTACATGATGGAAAAGATAACTTC TTCCATCAACATTTAATGTACACGATGGAAAAGATAACTTC < 41bp 0.587244930831662 0.818319347911994 0.0686875 0.020320743 prediction 0.462148834160664 Functional Gain - DUS4L ENSG00000105865 CDS Human protein_coding chr7:107217903 chr7:107217905 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_114760 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:107217902-107217912
64251 chr14 73958812 73958812 1 + T A rs3813563 73958808 + 73958788 73958828 41 TCTGGCGTGTATACCGACCCCGAGTCCCAACCGAGGAACTG TCTGGCGTGTATACCGACCCCGAGACCCAACCGAGGAACTG < 41bp 0.432293009392881 0.73107051956125 0.10825062 0.237953 prediction 0.462141039122499 Functional Gain - RIOX1 ENSG00000170468;ENSG00000255242 ncRNA_exonic Human other chr14:73958808 chr14:73958812 . 0.499 0 25 hm5C_associated_SNPs_114761 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:73958768-73958853
64251 chr16 88871951 88871951 1 + C T rs140700251 88871950 + 88871930 88871970 41 CAGGTGCTGGCGGAGATGTTCCGCAGCATGGACACCATCGT CAGGTGCTGGCGGAGATGTTCTGCAGCATGGACACCATCGT < 41bp 0.57300030198364 0.804068030417113 0.29293263 0.23509273 prediction 0.462135456866947 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88871950 chr16:88871951 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_114763 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:88871930-88871956
64251 chr19 5131955 5131955 1 + C T rs45459493 5131954 + 5131934 5131974 41 AAGAAGAGCCGGCGCCATCCCCTGGGCCGGCCGCCCACCCG AAGAAGAGCCGGCGCCATCCCTTGGGCCGGCCGCCCACCCG < 41bp 0.533110966173909 0.764168868541117 0.62702286 0.33850372 prediction 0.462115804734416 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5131954 chr19:5131955 synonymous SNV . 0 22 hm5C_associated_SNPs_114768 0 0 4 BUD13 POSTAR2 ENCODE chr19:5131934-5131960
64251 chr16 89293416 89293416 1 + T C COAD 89293414 + 89293394 89293434 41 TGTTCCTTAATCAGTCATACCTTCAGGCACGTGCGGGAAGT TGTTCCTTAATCAGTCATACCTCCAGGCACGTGCGGGAAGT < 41bp 0.44185065198197 0.731050789063633 0.15148938 0.94510376 prediction 0.462101578127267 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293414 chr16:89293416 synonymous SNV . 0 23 hm5C_associated_SNPs_114771 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:89293411-89293430
64251 chr3 49570131 49570131 1 + A G STAD 49570128 + 49570108 49570148 41 GTACCACCCAGGAGAGTGCCCTCAGAGGCGCCGCCCACAGA GTACCACCCAGGAGAGTGCCCTCGGAGGCGCCGCCCACAGA < 41bp 0.511914991278968 0.742961616145608 0.09683606 0.20418659 prediction 0.462093249733279 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49570128 chr3:49570131 synonymous SNV . 0 24 hm5C_associated_SNPs_114774 0 0 6 LIN28B POSTAR2 ENCODE chr3:49570095-49570145
64251 chr16 2138096 2138096 1 + C T rs45517391 2138095 + 2138075 2138115 41 GTGGCCAAGATCGTGTCTGACCGCAACCTGCCCTTCGTGGC GTGGCCAAGATCGTGTCTGACTGCAACCTGCCCTTCGTGGC < 41bp 0.567471290689668 0.798516040236815 0.4268992 0.32429484 prediction 0.462089499094294 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2138095 chr16:2138096 nonsynonymous SNV 0.879 3 22 hm5C_associated_SNPs_114777 3 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:2138096-2138097
64251 chr20 56138761 56138761 1 + C T SKCM 56138760 + 56138740 56138780 41 GTGCGTCGGGGATGACATTGCCTGGATGAAGTTTGACGCAC GTGCGTCGGGGATGACATTGCTTGGATGAAGTTTGACGCAC < 41bp 0.522058260353885 0.753091611829145 0.697449 0.615475 prediction 0.46206670295052 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56138760 chr20:56138761 synonymous SNV . 0 22 hm5C_associated_SNPs_114780 0 0 3 BUD13 POSTAR2 ENCODE chr20:56138720-56138826
64251 chr20 21321450 21321450 1 + C T UCEC 21321449 + 21321429 21321469 41 GTTCTCAAGTAGCCAGTAATCCGAGACAAGCAGCCTATGAA GTTCTCAAGTAGCCAGTAATCTGAGACAAGCAGCCTATGAA < 41bp 0.546993218130454 0.778025427427918 0.9328929 0.788484 prediction 0.462064418594929 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21321449 chr20:21321450 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_114781 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr20:21321435-21321455
64251 chr9 35675784 35675784 1 + C T UCEC 35675783 + 35675763 35675803 41 CCGCCCTGGCCCCGGGTGTCCCCAGCCTGCGCGGGCCGCTT CCGCCCTGGCCCCGGGTGTCCTCAGCCTGCGCGGGCCGCTT < 41bp 0.542851287338592 0.773879689160869 0.3613811 0.33275104 prediction 0.462056803644554 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675783 chr9:35675784 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_114784 0 0 1 RPS3 POSTAR2 ENCODE chr9:35675757-35675885
64251 chr3 12623672 12623672 1 + C A SKCM 12623671 + 12623651 12623691 41 AACCGAGAAAGCCGGCATGTCCCCAACAATGAAGATGTCGA AACCGAGAAAGCCGGCATGTCACCAACAATGAAGATGTCGA < 41bp 0.551804497389434 0.782825113726924 0.020456374 0.109288305 prediction 0.46204123267498 Functional Gain - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12623671 chr3:12623672 nonsynonymous SNV 0.403 0 22 hm5C_associated_SNPs_114788 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:12623639-12623681
64251 chr19 55670685 55670685 1 - G A HNSC 55670686 - 55670666 55670706 41 CTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCA CTTCGCACGTTTCTGCAAGTCTCAGGAATCAGCTCTGGGCA < 41bp 0.489549311154357 0.731017734793434 0.06570178 0.02402255 prediction 0.462035469586868 Functional Gain - DNAAF3 ENSG00000167646;ENSG00000267110 CDS Human other chr19:55670686 chr19:55670685 synonymous SNV . 0 22 hm5C_associated_SNPs_114789 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:55670653-55670697
64251 chr10 64893094 64893094 1 + T G rs189294313 64893092 + 64893072 64893112 41 AAGTGGTGAGGTTGTTGCTCCTTCAGCGCCTATCGCTGGCT AAGTGGTGAGGTTGTTGCTCCTGCAGCGCCTATCGCTGGCT < 41bp 0.644038436382881 0.875053806076503 0.40635106 0.41132843 prediction 0.462030739387243 Functional Gain - NRBF2 ENSG00000148572 UTR5 Human protein_coding chr10:64893092 chr10:64893094 . . 0 23 hm5C_associated_SNPs_114793 0 0 3 DDX3X POSTAR2 ENCODE chr10:64893093-64893215
64251 chr11 32611144 32611144 1 + C A UCEC 32611140 + 32611120 32611160 41 CTCACCACTGAAAAAAAGCACACCCTTTTAAGACTACTTTA CTCACCACTGAAAAAAAGCACACCATTTTAAGACTACTTTA < 41bp 0.30462993475707 0.731009017129228 0.012978822 0.098259 prediction 0.462018034258455 Functional Gain - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32611140 chr11:32611144 nonsynonymous SNV 0.712 0 25 hm5C_associated_SNPs_114795 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:32611097-32611185
64251 chr1 70896052 70896052 1 + T C UCEC 70896050 + 70896030 70896070 41 CTGTTAATTGTGAAAGCCTTCATAATAGACTTCGTTTCTTG CTGTTAATTGTGAAAGCCTTCACAATAGACTTCGTTTCTTG < 41bp 0.43862632008813 0.730995771872176 0.08415848 0.10140291 prediction 0.461991543744353 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70896050 chr1:70896052 synonymous SNV . 0 23 hm5C_associated_SNPs_114798 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:70896028-70896053
64251 chr10 70332883 70332883 1 + A G LUAD 70332880 + 70332860 70332900 41 AGCAACCCCCAAAGTTACCTCTCAAGGAAACCCCAGCATTC AGCAACCCCCAAAGTTACCTCTCGAGGAAACCCCAGCATTC < 41bp 0.487859631059306 0.730994305980097 0.14946482 0.76280445 prediction 0.461988611960193 Functional Gain - TET1 ENSG00000138336 CDS Human protein_coding chr10:70332880 chr10:70332883 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_114799 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:70332874-70332906
64251 chr19 39423268 39423268 1 + C A UCEC 39423267 + 39423247 39423287 41 CCTTGTGGAGGGCGGCCGCACCCAGGACCTGCCAGGCGTCA CCTTGTGGAGGGCGGCCGCACACAGGACCTGCCAGGCGTCA < 41bp 0.552263096534722 0.783256249508535 0.060299456 0.05685705 prediction 0.461986305947627 Functional Gain - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423267 chr19:39423268 synonymous SNV . 0 22 hm5C_associated_SNPs_114800 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:39423245-39423274
64251 chr3 167512508 167512508 1 + A G UCEC 167512505 + 167512485 167512525 41 AGCATGATGCTGGTGCTGTCCAGACAGGAAGTTCCTCTTGC AGCATGATGCTGGTGCTGTCCAGGCAGGAAGTTCCTCTTGC < 41bp 0.530411862908786 0.761404437050257 0.076681554 0.33396363 prediction 0.461985148282943 Functional Gain - SERPINI1 ENSG00000163536 CDS Human protein_coding chr3:167512505 chr3:167512508 synonymous SNV . 0 24 hm5C_associated_SNPs_114801 0 0 2 MBNL2 POSTAR2 GSE68890,GSM1685424 chr3:167512500-167512520
64251 chr19 11561629 11561629 1 + T C rs8616 11561627 + 11561607 11561647 41 CATTCCCAGGCCCCAACAGCCTTCAAAGATGGGTAAAGGAG CATTCCCAGGCCCCAACAGCCTCCAAAGATGGGTAAAGGAG < 41bp 0.521858469663445 0.752850833877967 0.52029526 0.9709779 prediction 0.461984728429046 Functional Gain - PRKCSH ENSG00000130175 UTR3 Human protein_coding chr19:11561627 chr19:11561629 . . 0 23 hm5C_associated_SNPs_114802 1 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11561477-11561631
64251 chr7 141443746 141443746 1 + C T UCEC 141443745 + 141443725 141443765 41 TGGCACAGAATATCAGTATTCCGGCCAGGCCTCAGAGACGT TGGCACAGAATATCAGTATTCTGGCCAGGCCTCAGAGACGT < 41bp 0.487234020784736 0.730984633341971 0.1538913 0.06962234 prediction 0.461969266683942 Functional Gain - SSBP1 ENSG00000106028 CDS Human protein_coding chr7:141443745 chr7:141443746 nonsynonymous SNV 0.963 3 22 hm5C_associated_SNPs_114805 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:141443701-141443768
64251 chr8 11640782 11640782 1 + C T SKCM 11640781 + 11640761 11640801 41 CAGTTGTCTTGGAGCTCTTCCCCAGTGGTCACACCCACCTG CAGTTGTCTTGGAGCTCTTCCTCAGTGGTCACACCCACCTG < 41bp 0.469739311837263 0.730969844609976 0.25771388 0.117824286 prediction 0.461939689219953 Functional Gain - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640781 chr8:11640782 nonsynonymous SNV 0.068 1 22 hm5C_associated_SNPs_114810 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:11640761-11640786
64251 chr9 132998620 132998620 1 + C G rs186003263 132998619 + 132998599 132998639 41 CGCCCCCTGGTGGTGGTAAGCCGCCAACGCACCTGGGGGCT CGCCCCCTGGTGGTGGTAAGCGGCCAACGCACCTGGGGGCT < 41bp 0.456488993204206 0.730968411508859 0.700173 0.8572392 prediction 0.461936823017718 Functional Gain - NCS1 ENSG00000107130 UTR3 Human protein_coding chr9:132998619 chr9:132998620 . . 0 22 hm5C_associated_SNPs_114812 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:132998614-132998655
64251 chr5 138266183 138266183 1 + C T GBM 138266182 + 138266162 138266202 41 GCGATCATGGCTCAGCTTCCCCAGGAGCAAAAAGCGAAGAT GCGATCATGGCTCAGCTTCCCTAGGAGCAAAAAGCGAAGAT < 41bp 0.540820785053184 0.771788854148458 0.21121696 0.12023467 prediction 0.461936138190548 Functional Gain - CTNNA1 ENSG00000044115 CDS Human protein_coding chr5:138266182 chr5:138266183 stopgain 1.000 1 22 hm5C_associated_SNPs_114813 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr5:138266164-138266188
64251 chr4 100543870 100543870 1 + C A SARC 100543866 + 100543846 100543886 41 AAAGTACGAAAGGCTGTCCACAGGCAGAGGTTATGTCTCTC AAAGTACGAAAGGCTGTCCACAGGAAGAGGTTATGTCTCTC < 41bp 0.33665437678024 0.730950489759548 0.27833098 0.6137096 prediction 0.461900979519095 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100543866 chr4:100543870 synonymous SNV . 0 25 hm5C_associated_SNPs_114815 0 0 1 SND1 POSTAR2 ENCODE chr4:100543856-100543886
64251 chrX 139795981 139795981 1 + C G rs764132261 139795980 + 139795960 139796000 41 ACCTGAGGCACACTGATGCACCCCGCATGACACAGACTTGC ACCTGAGGCACACTGATGCACGCCGCATGACACAGACTTGC < 41bp 0.451401985188736 0.730948146627751 0.06498301 0.14909902 prediction 0.461896293255502 Functional Gain - LINC00632 ENSG00000203930 UTR3 Human lincRNA chrX:139795980 chrX:139795981 . . 0 22 hm5C_associated_SNPs_114816 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:139795980-139796000
64251 chr14 62567321 62567321 1 + C A STAD 62567320 + 62567300 62567340 41 GAGATGATTGGCTGGATTGCCCTGGGCCAGAACAGCAGTGG GAGATGATTGGCTGGATTGCCATGGGCCAGAACAGCAGTGG < 41bp 0.475984182272361 0.730943141881057 0.3044162 0.8631909 prediction 0.461886283762113 Functional Gain - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62567320 chr14:62567321 nonsynonymous SNV 0.983 1 22 hm5C_associated_SNPs_114818 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:62567295-62567327
64251 chr19 44610560 44610560 1 + C A SKCM 44610559 + 44610539 44610579 41 ATTCTGATAGGAGACAAGATCCAAACTGAGATGGAGACTGT ATTCTGATAGGAGACAAGATCAAAACTGAGATGGAGACTGT < 41bp 0.551885638923773 0.782827008143074 0.13629872 0.3331715 prediction 0.461882738438602 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610559 chr19:44610560 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_114820 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:44610551-44610578
64251 chr17 41323275 41323275 1 + C G rs115515064 41323271 + 41323251 41323291 41 GCGGCAGAGCCGGTAGCGGACGGTCCTTGCATTGGCCTCCG GCGGCAGAGCCGGTAGCGGACGGTGCTTGCATTGGCCTCCG < 41bp 0.424390755542199 0.730940241897007 0.26848567 0.6525743 prediction 0.461880483794014 Functional Gain - NBR1 ENSG00000188554 UTR5 Human protein_coding chr17:41323271 chr17:41323275 . . 0 25 hm5C_associated_SNPs_114821 0 0 7 DDX3X POSTAR2 ENCODE chr17:41323234-41323319
64251 chr17 34913008 34913008 1 + T A UCEC 34913004 + 34912984 34913024 41 TCCTGAGTGCACTTTCTCAGCTTGTCCCATGTGTTGGTTGT TCCTGAGTGCACTTTCTCAGCTTGACCCATGTGTTGGTTGT < 41bp 0.392743373399851 0.730934477074252 0.1693151 0.08256936 prediction 0.461868954148504 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34913004 chr17:34913008 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_114822 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:34913000-34913020
64251 chr6 36169300 36169300 1 + C T SKCM 36169299 + 36169279 36169319 41 GCTAGGAGGAAGGGCGACTCCCCTAGAAGCATCAGTGAGAC GCTAGGAGGAAGGGCGACTCCTCTAGAAGCATCAGTGAGAC < 41bp 0.580576829593663 0.811504678559855 0.038891137 0.8930868 prediction 0.461855697932385 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36169299 chr6:36169300 nonsynonymous SNV 0.274 2 22 hm5C_associated_SNPs_114826 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:36169284-36169304
64251 chr20 32354703 32354703 1 + C T BLCA 32354702 + 32354682 32354722 41 GCCACAGCCCCAGGCCTTGTCCACAGCTGGTGAGGAAGAGG GCCACAGCCCCAGGCCTTGTCTACAGCTGGTGAGGAAGAGG < 41bp 0.473942773231509 0.730914314557256 0.19595793 0.33943248 prediction 0.461828629114513 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32354702 chr20:32354703 synonymous SNV . 0 22 hm5C_associated_SNPs_114827 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:32354676-32354714
64251 chr5 52360928 52360928 1 + C T COAD 52360927 + 52360907 52360947 41 AATGGTCATCAGGGCACTATCCGCACAAAGTATTCCCAGGT AATGGTCATCAGGGCACTATCTGCACAAAGTATTCCCAGGT < 41bp 0.554735603936577 0.785638795498769 0.35407388 0.22049308 prediction 0.461806383124385 Functional Gain - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52360927 chr5:52360928 nonsynonymous SNV 0.841 3 22 hm5C_associated_SNPs_114832 1 0 1 SND1 POSTAR2 ENCODE chr5:52360904-52360943
64251 chr2 234079218 234079218 1 + A G LUSC 234079215 + 234079195 234079235 41 GTCCCACGACCAGCTGCTCACAGAGAGGAGGGAGCAGAAGG GTCCCACGACCAGCTGCTCACAGGGAGGAGGGAGCAGAAGG < 41bp 0.542664127598078 0.773563831357138 0.92219585 0.9314307 prediction 0.46179940751812 Functional Gain - INPP5D ENSG00000168918 CDS Human protein_coding chr2:234079215 chr2:234079218 nonsynonymous SNV 0.516 3 24 hm5C_associated_SNPs_114834 0 0 3 GRWD1 POSTAR2 ENCODE chr2:234079175-234079238
64251 chr19 44605324 44605324 1 + A G rs118149610 44605321 + 44605301 44605341 41 ACAGGGATACTTTCCACTTCCTAAGGGAAGAAAAGATTTGG ACAGGGATACTTTCCACTTCCTAGGGGAAGAAAAGATTTGG < 41bp 0.495622025666467 0.730898769497555 0.09094617 0.22142094 prediction 0.46179753899511 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44605321 chr19:44605324 nonsynonymous SNV 0.040 1 24 hm5C_associated_SNPs_114835 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44605320-44605340
64251 chr19 10395208 10395208 1 + C T rs1801714 10395207 + 10395187 10395227 41 TTCCAGCCCAGCCACTGGGCCCGAGGGCCCAGCTCCTGCTG TTCCAGCCCAGCCACTGGGCCTGAGGGCCCAGCTCCTGCTG < 41bp 0.5249049153596 0.755802940456515 0.21449867 0.18625543 prediction 0.461796050193831 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395207 chr19:10395208 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_114836 0 0 5 RPS3 POSTAR2 ENCODE chr19:10395185-10395236
64251 chr17 42825784 42825784 1 + C T LUAD 42825783 + 42825763 42825803 41 CCCCCATCAGCCCTCCCATCCCAGGGCAGCATCTCCCAGGA CCCCCATCAGCCCTCCCATCCTAGGGCAGCATCTCCCAGGA < 41bp 0.533163102369408 0.76405441489526 0.8549292 0.353469 prediction 0.461782625051703 Functional Gain - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42825783 chr17:42825784 synonymous SNV . 0 22 hm5C_associated_SNPs_114838 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42825725-42825790
64251 chr13 115090232 115090232 1 + C T rs151020694 115090231 + 115090211 115090251 41 AGAGCCTAGGAGACCAGCCCCCGCTGTGTCACCAGGCTCTT AGAGCCTAGGAGACCAGCCCCTGCTGTGTCACCAGGCTCTT < 41bp 0.527374676622018 0.758250815719545 0.23864794 0.22298357 prediction 0.461752278195055 Functional Gain - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090231 chr13:115090232 synonymous SNV . 0 22 hm5C_associated_SNPs_114841 0 0 1 ZNF622 POSTAR2 ENCODE chr13:115090181-115090243
64251 chr19 36268752 36268752 1 + C T STAD 36268751 + 36268731 36268771 41 CAGCTCCTCGAGGCCCCTTCCCGCGGCTGGCTGACTGCGCC CAGCTCCTCGAGGCCCCTTCCTGCGGCTGGCTGACTGCGCC < 41bp 0.521334914263433 0.75219126046607 0.93883413 0.9199915 prediction 0.461712692405274 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36268751 chr19:36268752 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_114848 0 0 2 DDX24 POSTAR2 ENCODE chr19:36268725-36268766
64251 chr7 128587098 128587098 1 + C A UCEC 128587097 + 128587077 128587117 41 CTGCAGAGGATGTTGCCAAGCCTGAGCCTCACAGGTGGGGC CTGCAGAGGATGTTGCCAAGCATGAGCCTCACAGGTGGGGC < 41bp 0.541226024990629 0.772080354828181 0.027968377 0.06516862 prediction 0.461708659675104 Functional Gain - IRF5 ENSG00000128604 CDS Human protein_coding chr7:128587097 chr7:128587098 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_114849 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr7:128587079-128587110
64251 chr13 99853323 99853323 1 + C G rs560021528 99853322 + 99853302 99853342 41 CCGACCCTCCAGACCCGCGTCCGAACCCTGCTAGTTCCCGG CCGACCCTCCAGACCCGCGTCGGAACCCTGCTAGTTCCCGG < 41bp 0.420781162883366 0.730846090990822 0.3799884 0.78779525 prediction 0.461692181981644 Functional Gain - UBAC2 ENSG00000134882 UTR5 Human protein_coding chr13:99853322 chr13:99853323 . . 0 22 hm5C_associated_SNPs_114852 0 0 2 XPO5 POSTAR2 ENCODE chr13:99853277-99853328
64251 chr6 26545675 26545675 1 + C T LUAD 26545674 + 26545654 26545694 41 GATGCCTCTACACTCCAGTCCCAGAAAGCGGAAGGCACTGG GATGCCTCTACACTCCAGTCCTAGAAAGCGGAAGGCACTGG < 41bp 0.545764471238726 0.776601938859405 0.250354 0.2306487 prediction 0.461674935241358 Functional Gain - HMGN4 ENSG00000182952 CDS Human protein_coding chr6:26545674 chr6:26545675 stopgain 0.998 1 22 hm5C_associated_SNPs_114857 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:26545644-26545784
64251 chrX 47086801 47086801 1 + C T UCEC 47086800 + 47086780 47086820 41 TGAGGGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAAC TGAGGGTCGAAATCGGATCTCTGCAGAGGATGCCATGAAAC < 41bp 0.580014867379569 0.810850625967126 0.25805867 0.1780048 prediction 0.461671517175112 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47086800 chrX:47086801 synonymous SNV . 0 22 hm5C_associated_SNPs_114858 0 0 19 NCBP3 POSTAR2 GSE38201,GSM936507 chrX:47086781-47086806
64251 chr9 26956433 26956433 1 + C A rs368296180 26956432 + 26956412 26956452 41 TTAGTGGGTAGGCCTGAGAGCCGAGGAAAACTGAGCGTGGG TTAGTGGGTAGGCCTGAGAGCAGAGGAAAACTGAGCGTGGG < 41bp 0.554668414879203 0.785498522817551 0.912778 0.9225167 prediction 0.461660215876695 Functional Gain - IFT74 ENSG00000096872 UTR5 Human protein_coding chr9:26956432 chr9:26956433 . . 0 22 hm5C_associated_SNPs_114861 0 0 2 NCBP2 POSTAR2 ENCODE chr9:26956420-26956517
64251 chr8 27358525 27358525 1 + C A LUSC 27358524 + 27358504 27358544 41 AAAGGAGAGATCACACTTTCCCAGGTGAGGGGACATCACCA AAAGGAGAGATCACACTTTCCAAGGTGAGGGGACATCACCA < 41bp 0.469506689327174 0.730817634760638 0.9053279 0.9048005 prediction 0.461635269521275 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27358524 chr8:27358525 nonsynonymous SNV 0.974 1 22 hm5C_associated_SNPs_114865 0 0 1 PPIG POSTAR2 ENCODE chr8:27358505-27358527
64251 chr1 28863279 28863279 1 + C T COAD 28863278 + 28863258 28863298 41 GGAAAAGCATACAGCCTGGGCCGGGCTGAGTATGGGCGGCT GGAAAAGCATACAGCCTGGGCTGGGCTGAGTATGGGCGGCT < 41bp 0.515142283269378 0.745946956371025 0.50807244 0.260943 prediction 0.461609346203294 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28863278 chr1:28863279 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_114869 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:28863260-28863300
64251 chr17 76135285 76135285 1 + C T LUAD 76135284 + 76135264 76135304 41 CTCCCAGACCCAGGCCAATGCCAGGGCCATCCACAGGCTCC CTCCCAGACCCAGGCCAATGCTAGGGCCATCCACAGGCTCC < 41bp 0.538618069528461 0.769418923211896 0.8966485 0.81893426 prediction 0.461601707366871 Functional Gain - TMC8 ENSG00000167895 CDS Human protein_coding chr17:76135284 chr17:76135285 synonymous SNV . 0 22 hm5C_associated_SNPs_114872 0 0 1 DROSHA POSTAR2 ENCODE chr17:76135085-76135313
64251 chr6 33410885 33410885 1 + T A LUAD 33410881 + 33410861 33410901 41 GGACTTACAGGGTGATGGGCCTGGTGGCCGCCTCAACAGCA GGACTTACAGGGTGATGGGCCTGGAGGCCGCCTCAACAGCA < 41bp 0.411155554121883 0.730792348977018 0.353678 0.4386556 prediction 0.461584697954037 Functional Gain - SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33410881 chr6:33410885 synonymous SNV . 0 25 hm5C_associated_SNPs_114875 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr6:33410874-33410894
64251 chr11 118307464 118307464 1 + C G MESO 118307460 + 118307440 118307480 41 GGCTGGGGTTCCAGGGGGAGCGGCCGCCGCCTCAGCAGCCT GGCTGGGGTTCCAGGGGGAGCGGCGGCCGCCTCAGCAGCCT < 41bp 0.467236945423529 0.730776652469801 0.8816938 0.90699047 prediction 0.461553304939602 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307460 chr11:118307464 synonymous SNV . 0 25 hm5C_associated_SNPs_114880 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:118307443-118307492
64251 chr4 39448254 39448254 1 + C T COAD 39448253 + 39448233 39448273 41 GGGGCTGAAGCTTGGCATCTCCGCGATGGTCACCCTGTATT GGGGCTGAAGCTTGGCATCTCTGCGATGGTCACCCTGTATT < 41bp 0.528079161361595 0.758855227560622 0.26483208 0.27039546 prediction 0.461552132398054 Functional Gain - KLB ENSG00000134962 CDS Human protein_coding chr4:39448253 chr4:39448254 synonymous SNV . 0 22 hm5C_associated_SNPs_114881 0 0 2 BUD13 POSTAR2 ENCODE chr4:39448246-39448328
64251 chr19 52085121 52085121 1 + A G UCEC 52085118 + 52085098 52085138 41 TGTGGAGGAGGCTGAAGTCTCACATCAGAGGTGTCAAGGTG TGTGGAGGAGGCTGAAGTCTCACGTCAGAGGTGTCAAGGTG < 41bp 0.543632425357475 0.774406748756988 0.08439684 0.19844458 prediction 0.461548646799025 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52085118 chr19:52085121 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_114882 0 0 2 GPKOW POSTAR2 ENCODE chr19:52085110-52085174
64251 chr20 62373567 62373567 1 + C T LUSC 62373566 + 62373546 62373586 41 TCGGCGATGCAGAGACACATCCGCCTGGTGCACCTGGGGTG TCGGCGATGCAGAGACACATCTGCCTGGTGCACCTGGGGTG < 41bp 0.490154205296807 0.730772075711788 0.24036148 0.2675224 prediction 0.461544151423576 Functional Gain - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373566 chr20:62373567 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_114883 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62373559-62373588
64251 chr15 96877712 96877712 1 + C T ESCA 96877711 + 96877691 96877731 41 GCTTCGCCCATGTCCGCCGACCGGGTGGTCGCCTTTATGGA GCTTCGCCCATGTCCGCCGACTGGGTGGTCGCCTTTATGGA < 41bp 0.556045776190401 0.786815765996498 0.88511384 0.38523477 prediction 0.461539979612193 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877711 chr15:96877712 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_114885 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:96877709-96877740
64251 chr9 131669688 131669688 1 + C T LUSC 131669687 + 131669667 131669707 41 CTGGCCCGGAGCCCACCTACCCCAACTCCACCATTCTGCCG CTGGCCCGGAGCCCACCTACCTCAACTCCACCATTCTGCCG < 41bp 0.565837866087249 0.796606619670034 0.05284366 0.05974424 prediction 0.461537507165569 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131669687 chr9:131669688 nonsynonymous SNV 0.674 0 22 hm5C_associated_SNPs_114887 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:131669677-131669704
64251 chr6 158066823 158066823 1 + A G STAD 158066820 + 158066800 158066840 41 GTCTGGTCCATCGTTGGCCTCTCAGGATTCCACACCTACTT GTCTGGTCCATCGTTGGCCTCTCGGGATTCCACACCTACTT < 41bp 0.536124599146661 0.766890457613616 0.022186339 0.08754206 prediction 0.46153171693391 Functional Gain - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:158066820 chr6:158066823 synonymous SNV . 0 24 hm5C_associated_SNPs_114889 0 0 1 PPIG POSTAR2 ENCODE chr6:158066758-158066856
64251 chr15 58837951 58837951 1 + C T KICH 58837950 + 58837930 58837970 41 TTTCCCATTAGGGCTGGATGCCGCGGGACCTTTGTTTGAGG TTTCCCATTAGGGCTGGATGCTGCGGGACCTTTGTTTGAGG < 41bp 0.523272025344629 0.754033526577262 0.31891364 0.27899855 prediction 0.461523002465267 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58837950 chr15:58837951 synonymous SNV . 0 22 hm5C_associated_SNPs_114891 0 0 1 SND1 POSTAR2 ENCODE chr15:58837940-58837981
64251 chr6 10726154 10726154 1 + C T rs143847760 10726153 + 10726133 10726173 41 CCTCTAGGCAGCGTGCCGTCCCTGGCTGCAGGGCTGCTCTT CCTCTAGGCAGCGTGCCGTCCTTGGCTGCAGGGCTGCTCTT < 41bp 0.539949156041851 0.770699871707094 0.12750584 0.15798968 prediction 0.461501431330487 Functional Gain - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10726153 chr6:10726154 synonymous SNV . 0 22 hm5C_associated_SNPs_114895 0 0 9 BUD13 POSTAR2 ENCODE chr6:10726124-10726184
64251 chr21 45732045 45732045 1 + C A COAD 45732044 + 45732024 45732064 41 TTTACCACCAGGGAGGGGCGCCGGGCAGCGGCCTACAACCT TTTACCACCAGGGAGGGGCGCAGGGCAGCGGCCTACAACCT < 41bp 0.544613328143205 0.775357374256737 0.74199826 0.88723874 prediction 0.461488092227064 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45732044 chr21:45732045 synonymous SNV . 0 22 hm5C_associated_SNPs_114897 0 0 5 METAP2 POSTAR2 ENCODE chr21:45732005-45732064
64251 chr3 32201112 32201112 1 + C T UCEC 32201111 + 32201091 32201131 41 ATGGGCAAAAGCTCCAAGGACCGCAGACTTCTGCTGAAGTG ATGGGCAAAAGCTCCAAGGACTGCAGACTTCTGCTGAAGTG < 41bp 0.576535247161315 0.807278988342794 0.27288142 0.3286753 prediction 0.461487482362958 Functional Gain - GPD1L ENSG00000152642 CDS Human protein_coding chr3:32201111 chr3:32201112 nonsynonymous SNV 0.895 3 22 hm5C_associated_SNPs_114898 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32201083-32201123
64251 chr12 56117725 56117725 1 + C T UCEC 56117724 + 56117704 56117744 41 ATCGTGGAGCCTGGCTTCTTCCGAACCCCTGTGACCAACCT ATCGTGGAGCCTGGCTTCTTCTGAACCCCTGTGACCAACCT < 41bp 0.506065822670477 0.736806783017108 0.3239987 0.19955832 prediction 0.461481920693263 Functional Gain - RDH5 ENSG00000135437 CDS Human protein_coding chr12:56117724 chr12:56117725 stopgain 0.998 0 22 hm5C_associated_SNPs_114900 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:56117706-56117752
64251 chr17 14204953 14204953 1 + C A rs199858271 14204949 + 14204929 14204969 41 AAGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGCTCTA AAGCTCGCGCTGCTCTTCGCCATGATCTGCGTCTGGCTCTA < 41bp 0.344341902212676 0.73073229880785 0.17513096 0.1492883 prediction 0.4614645976157 Functional Gain - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14204949 chr17:14204953 nonsynonymous SNV 0.993 0 25 hm5C_associated_SNPs_114906 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:14204935-14204959
64251 chrX 47088885 47088885 1 + C G rs376250984 47088881 + 47088861 47088901 41 GGCTATGGGAAAGCATGCCACAGCCACTCGCCTTCCTACCC GGCTATGGGAAAGCATGCCACAGCGACTCGCCTTCCTACCC < 41bp 0.61253955347465 0.843269204817789 0.13430804 0.21837181 prediction 0.461459302686277 Functional Gain - CDK16 ENSG00000102225 UTR3 Human protein_coding chrX:47088881 chrX:47088885 . . 0 25 hm5C_associated_SNPs_114909 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47088804-47088885
64251 chr3 179304403 179304403 1 + T A COAD 179304399 + 179304379 179304419 41 AGGTTTAGCTCATGGATTGGCGGCTCCATTCTAGCCTCTTT AGGTTTAGCTCATGGATTGGCGGCACCATTCTAGCCTCTTT < 41bp 0.407697888909112 0.730719028242392 0.20292854 0.041852087 prediction 0.461438056484783 Functional Gain - ACTL6A ENSG00000136518 CDS Human protein_coding chr3:179304399 chr3:179304403 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_114912 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:179304385-179304404
64251 chr7 64864672 64864672 1 + T A UCEC 64864668 + 64864648 64864688 41 GAATGTGACAAAGCCTTTAACAAGTTCTCAACCCTTATTAC GAATGTGACAAAGCCTTTAACAAGATCTCAACCCTTATTAC < 41bp 0.615397269668011 0.846109541103618 0.046121925 0.28052938 prediction 0.461424542871212 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64864668 chr7:64864672 nonsynonymous SNV 0.819 0 25 hm5C_associated_SNPs_114913 0 0 13 FXR1 POSTAR2 GSE39682,GSM977619 chr7:64864660-64864680
64251 chr11 66373037 66373037 1 + C T SKCM 66373036 + 66373016 66373056 41 CCGGGGAGGCCATCCCTTATCCAAGATCACAGGGAACTCCG CCGGGGAGGCCATCCCTTATCTAAGATCACAGGGAACTCCG < 41bp 0.548481888268212 0.779181799407372 0.85749435 0.27265978 prediction 0.461399822278319 Functional Gain - CCS ENSG00000173992 CDS Human protein_coding chr11:66373036 chr11:66373037 synonymous SNV . 0 22 hm5C_associated_SNPs_114917 0 0 11 DDX24 POSTAR2 ENCODE chr11:66372979-66373055
64251 chr22 39120355 39120355 1 + C T SKCM 39120354 + 39120334 39120374 41 TCACCAGGCTGCCGGAAGATCCCCGTGCTGGTGCAGAGCAA TCACCAGGCTGCCGGAAGATCTCCGTGCTGGTGCAGAGCAA < 41bp 0.454208349518545 0.730698376707235 0.3532066 0.7737945 prediction 0.46139675341447 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39120354 chr22:39120355 nonsynonymous SNV 0.736 4 22 hm5C_associated_SNPs_114918 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:39120325-39120363
64251 chr8 57130673 57130673 1 + T C rs139482322 57130671 + 57130651 57130691 41 AGGATTCTGTGATTAAAATCCTTAAATATTGGGTTGCCTTC AGGATTCTGTGATTAAAATCCTCAAATATTGGGTTGCCTTC < 41bp 0.494795566205918 0.730696682948445 0.0892978 0.4997476 prediction 0.461393365896889 Functional Gain - CHCHD7 ENSG00000170791 UTR3 Human protein_coding chr8:57130671 chr8:57130673 . . 0 23 hm5C_associated_SNPs_114919 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:57130665-57130703
64251 chr16 24135243 24135243 1 + C T UCEC 24135242 + 24135222 24135262 41 GACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTT GACAACAATGGCAACAGAGACTGGATGAAACTGACCGATTT < 41bp 0.481958292490969 0.730689509982868 0.8002846 0.29708314 prediction 0.461379019965736 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24135242 chr16:24135243 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_114920 0 0 4 FMR1 POSTAR2 ENCODE chr16:24135237-24135303
64251 chr19 33183187 33183187 1 + C G rs192362382 33183186 + 33183166 33183206 41 TTTCCCGTCGCTGCCCGACACCGATGACCACAAGACCGACA TTTCCCGTCGCTGCCCGACACGGATGACCACAAGACCGACA < 41bp 0.410870306471011 0.730684632051725 0.12708765 0.38633367 prediction 0.461369264103449 Functional Gain - NUDT19 ENSG00000213965 CDS Human protein_coding chr19:33183186 chr19:33183187 synonymous SNV . 0 22 hm5C_associated_SNPs_114924 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:33183152-33183190
64251 chr5 71403301 71403301 1 + C G rs141626917 71403300 + 71403280 71403320 41 GGAGATAATCCTTTCTCCTGCCGCAGTGGAGAGGAGCGGCC GGAGATAATCCTTTCTCCTGCGGCAGTGGAGAGGAGCGGCC < 41bp 0.548411615797989 0.779092461269365 0.30817378 0.529028 prediction 0.461361690942753 Functional Gain - MAP1B ENSG00000131711 UTR5 Human protein_coding chr5:71403300 chr5:71403301 . . 0 22 hm5C_associated_SNPs_114928 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:71403280-71403320
64251 chr5 147593499 147593499 1 + C T SKCM 147593498 + 147593478 147593518 41 CTGTGGTGAGTTCCAGGACCCCAAGGTCTACTGCACTCGGG CTGTGGTGAGTTCCAGGACCCTAAGGTCTACTGCACTCGGG < 41bp 0.506718590722507 0.737395223050626 0.28854364 0.3671748 prediction 0.461353264656239 Functional Gain - SPINK6 ENSG00000178172 CDS Human protein_coding chr5:147593498 chr5:147593499 synonymous SNV . 0 22 hm5C_associated_SNPs_114930 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:147593460-147593520
64251 chr7 155251243 155251243 1 + C G rs199573836 155251239 + 155251219 155251259 41 GCTGCCCGCGGTCCTGCAGGCGCCCGGCAACCACCAGCACC GCTGCCCGCGGTCCTGCAGGCGCCGGGCAACCACCAGCACC < 41bp 0.61422138566966 0.844879523677092 0.22856489 0.26405883 prediction 0.461316276014864 Functional Gain - EN2 ENSG00000164778 CDS Human protein_coding chr7:155251239 chr7:155251243 synonymous SNV . 0 25 hm5C_associated_SNPs_114936 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:155251226-155251255
64251 chr22 41623137 41623137 1 + C T UCEC 41623136 + 41623116 41623156 41 GGTGGGCATGAAGCTGGAGGCCGTGGACCTGATGGAGCCCC GGTGGGCATGAAGCTGGAGGCTGTGGACCTGATGGAGCCCC < 41bp 0.506093694289812 0.736734309971993 0.38748813 0.26221165 prediction 0.461281231364362 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41623136 chr22:41623137 synonymous SNV . 0 22 hm5C_associated_SNPs_114940 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr22:41623135-41623146
64251 chr8 67589989 67589989 1 + C T SKCM 67589988 + 67589968 67590008 41 AACCAGCCAGCACCCCCTATCCCCATTCCCACACTTTCCCT AACCAGCCAGCACCCCCTATCTCCATTCCCACACTTTCCCT < 41bp 0.467506148622597 0.730638570169913 0.10877898 0.9538052 prediction 0.461277140339825 Functional Gain - C8orf44 ENSG00000213865 CDS Human protein_coding chr8:67589988 chr8:67589989 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_114941 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221662 chr8:67589980-67590000
64251 chr11 64878064 64878064 1 + C A UCEC 64878060 + 64878040 64878080 41 GCAGCAGGGCCGCTACGCCCCCAGCTATACCCCCAGGTCTG GCAGCAGGGCCGCTACGCCCCCAGATATACCCCCAGGTCTG < 41bp 0.328859719139104 0.730629022598751 0.08661443 0.23541477 prediction 0.461258045197502 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878060 chr11:64878064 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_114944 0 0 2 FXR2 POSTAR2 ENCODE chr11:64878017-64878071
64251 chr10 54074332 54074332 1 + C T SKCM 54074331 + 54074311 54074351 41 CAACGCTATCAAGAACCTGCCCCCACCGCTGGGCGGCGCTG CAACGCTATCAAGAACCTGCCTCCACCGCTGGGCGGCGCTG < 41bp 0.570165025689051 0.800789490373897 0.05131367 0.93048286 prediction 0.461248929369691 Functional Gain - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54074331 chr10:54074332 synonymous SNV . 0 22 hm5C_associated_SNPs_114947 0 0 6 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54074220-54074340
64251 chr1 48694628 48694628 1 + T C HNSC 48694626 + 48694606 48694646 41 GTAGGTGGCTTCGAGTGGAACGTAAGGAAGCTGGCCTGGTT GTAGGTGGCTTCGAGTGGAACGCAAGGAAGCTGGCCTGGTT < 41bp 0.547987610256456 0.778604988182433 0.6874662 0.51510173 prediction 0.461234755851953 Functional Gain - SLC5A9 ENSG00000272491;ENSG00000117834 ncRNA_exonic;splicing Human other chr1:48694626 chr1:48694628 . 0.995 0 23 hm5C_associated_SNPs_114948 0 0 4 PRPF8 POSTAR2 ENCODE chr1:48694620-48694675
64251 chr4 69696458 69696458 1 + C A rs536035975 69696454 + 69696434 69696474 41 TTCGAGTTGCAGCCCACAACCTCACCTGGTTCCAGTACCAC TTCGAGTTGCAGCCCACAACCTCAACTGGTTCCAGTACCAC < 41bp 0.317476148999449 0.730600115813108 0.042824924 0.22309077 prediction 0.461200231626216 Functional Gain - UGT2B10 ENSG00000109181 CDS Human protein_coding chr4:69696454 chr4:69696458 nonsynonymous SNV 0.642 0 25 hm5C_associated_SNPs_114956 0 0 3 GRWD1 POSTAR2 ENCODE chr4:69696373-69696461
64251 chr10 121436497 121436497 1 + T C LIHC 121436495 + 121436475 121436515 41 CCGAGGGACGAGCCGATGTGCGTCAGGCCAGGAGAGACGGT CCGAGGGACGAGCCGATGTGCGCCAGGCCAGGAGAGACGGT < 41bp 0.6093270568432 0.839926890649901 0.51701975 0.22148567 prediction 0.461199667613403 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121436495 chr10:121436497 synonymous SNV . 0 23 hm5C_associated_SNPs_114957 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:121436462-121436510
64251 chr16 69200491 69200491 1 + A G rs16958676 69200488 + 69200468 69200508 41 CGAGGTGTCAGTGACATCAGCACAGGTGGTTTGTGTTGAGG CGAGGTGTCAGTGACATCAGCACGGGTGGTTTGTGTTGAGG < 41bp 0.505346973649245 0.73593064248298 0.4202174 0.6467823 prediction 0.461167337667469 Functional Gain - UTP4 ENSG00000141076 UTR3 Human protein_coding chr16:69200488 chr16:69200491 . . 0 24 hm5C_associated_SNPs_114962 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:69200477-69200513
64251 chr20 3782683 3782683 1 + C T SKCM 3782682 + 3782662 3782702 41 GGCCCCAGGACAGGGACACGCCCGTGCAGAATAAGCGGAGG GGCCCCAGGACAGGGACACGCTCGTGCAGAATAAGCGGAGG < 41bp 0.561593089351228 0.792160056538836 0.07265088 0.21128365 prediction 0.461133934375216 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3782682 chr20:3782683 nonsynonymous SNV 0.002 4 22 hm5C_associated_SNPs_114966 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:3782663-3782711
64251 chr20 3784183 3784183 1 + A G COAD 3784180 + 3784160 3784200 41 TCTCATCTGAGCGTGGGCCCCGCATGTGAGTCCCAGCTCCG TCTCATCTGAGCGTGGGCCCCGCGTGTGAGTCCCAGCTCCG < 41bp 0.521265654431204 0.751832394733432 0.23582539 0.4890633 prediction 0.461133480604456 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3784180 chr20:3784183 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_114967 0 0 3 GRWD1 POSTAR2 ENCODE chr20:3784152-3784188
64251 chrX 46884169 46884169 1 + C T OV 46884168 + 46884148 46884188 41 GACGTTCTGTTTATCCGACCCCGGAAGTATATTCACTGCTC GACGTTCTGTTTATCCGACCCTGGAAGTATATTCACTGCTC < 41bp 0.561480855079297 0.792045667584792 0.38265678 0.3504104 prediction 0.46112962501099 Functional Gain - JADE3 ENSG00000102221 CDS Human protein_coding chrX:46884168 chrX:46884169 nonsynonymous SNV 0.754 0 22 hm5C_associated_SNPs_114968 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chrX:46884133-46884203
64251 chr21 30693737 30693737 1 + C A COAD 30693736 + 30693716 30693756 41 TTTGTGGAGGGACAGCGGTTCCGCGCTCACCGGTCCGTGCT TTTGTGGAGGGACAGCGGTTCAGCGCTCACCGGTCCGTGCT < 41bp 0.573852099700072 0.804416394782429 0.4286596 0.52596724 prediction 0.461128590164714 Functional Gain - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30693736 chr21:30693737 nonsynonymous SNV 0.953 2 22 hm5C_associated_SNPs_114969 0 0 3 EIF3H POSTAR2 ENCODE chr21:30693661-30693806
64251 chrX 54841116 54841116 1 + C A OV 54841115 + 54841095 54841135 41 TACCTGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTGA TACCTGGACTATGCCAGAGTCACCAATAGCAATCCCCCTGA < 41bp 0.566502151942015 0.797064719819118 0.12533092 0.22066048 prediction 0.461125135754206 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841115 chrX:54841116 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_114971 0 0 1 DDX24 POSTAR2 ENCODE chrX:54841093-54841133
64251 chr19 37748241 37748241 1 + T C rs146849820 37748239 + 37748219 37748259 41 TGGGGATGGAAGTGTGATTGCTTCATTCAAATGCACGCCCC TGGGGATGGAAGTGTGATTGCTCCATTCAAATGCACGCCCC < 41bp 0.510973060959485 0.741533910226576 0.20133647 0.6634837 prediction 0.461121698534182 Functional Gain - LINC01535 ENSG00000226686 ncRNA_exonic Human lincRNA chr19:37748239 chr19:37748241 . . 0 23 hm5C_associated_SNPs_114972 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:37748209-37748247
64251 chr15 91478587 91478587 1 + C A rs200876300 91478586 + 91478566 91478606 41 TGGTCCAGGGACCCCCGAGCCCCGGCCGGCCACCCCCGGGG TGGTCCAGGGACCCCCGAGCCACGGCCGGCCACCCCCGGGG < 41bp 0.533645964117391 0.764202474966287 0.19920984 0.32007134 prediction 0.461113021697791 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91478586 chr15:91478587 synonymous SNV . 0 22 hm5C_associated_SNPs_114973 0 0 1 DDX3X POSTAR2 ENCODE chr15:91478516-91478599
64251 chr16 86602192 86602192 1 + C G LUAD 86602191 + 86602171 86602211 41 GACGCCGCAGCCCGGGGCCGCCGCGGCGCAGGCGGCCTCCT GACGCCGCAGCCCGGGGCCGCGGCGGCGCAGGCGGCCTCCT < 41bp 0.624723449750777 0.855276572346559 0.68525386 0.91418016 prediction 0.461106245191564 Functional Gain - FOXC2 ENSG00000176692 CDS Human protein_coding chr16:86602191 chr16:86602192 synonymous SNV . 0 22 hm5C_associated_SNPs_114975 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:86602190-86602249
64251 chr2 162279909 162279909 1 + T A LUAD 162279905 + 162279885 162279925 41 ACACCGGCTGTGACATGGACCGCCTGACCCCCTCGCCCAAC ACACCGGCTGTGACATGGACCGCCAGACCCCCTCGCCCAAC < 41bp 0.658783109049667 0.889333731549604 0.14306667 0.88135 prediction 0.461101244999875 Functional Gain - TBR1 ENSG00000136535 CDS Human protein_coding chr2:162279905 chr2:162279909 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_114976 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:162279896-162279939
64251 chr22 40742592 40742592 1 + C G KIRC 40742591 + 40742571 40742611 41 TGGAGGCGATCATGGTTCGCCCGACAGCTACCGCTCACCTC TGGAGGCGATCATGGTTCGCCGGACAGCTACCGCTCACCTC < 41bp 0.417905573235523 0.730544241781317 0.1514504 0.45550185 prediction 0.461088483562635 Functional Gain - ADSL ENSG00000239900 CDS Human protein_coding chr22:40742591 chr22:40742592 synonymous SNV . 0 22 hm5C_associated_SNPs_114978 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819212 chr22:40742520-40742640
64251 chr2 235950438 235950438 1 + C T BLCA 235950437 + 235950417 235950457 41 CCAGCATCAGCATCCACGTGCCCGAGGGCCACGTCGCCCCT CCAGCATCAGCATCCACGTGCTCGAGGGCCACGTCGCCCCT < 41bp 0.589554752612587 0.820097248985583 0.29447073 0.09903091 prediction 0.461084992745994 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235950437 chr2:235950438 nonsynonymous SNV 0.455 5 22 hm5C_associated_SNPs_114980 0 0 1 RPS3 POSTAR2 ENCODE chr2:235950393-235950456
64251 chr2 128186247 128186247 1 + A G rs145800354 128186244 + 128186224 128186264 41 TCAAGATTCCCGTGGTCCCGCACAATGAGTGCAGCGAGGTC TCAAGATTCCCGTGGTCCCGCACGATGAGTGCAGCGAGGTC < 41bp 0.550959912474388 0.781493589017321 0.056685537 0.074427694 prediction 0.461067353085866 Functional Gain - PROC ENSG00000115718 CDS Human protein_coding chr2:128186244 chr2:128186247 nonsynonymous SNV 0.076 1 24 hm5C_associated_SNPs_114984 0 0 8 GRWD1 POSTAR2 ENCODE chr2:128186225-128186252
64251 chr11 372947 372947 1 + T A LUAD 372943 + 372923 372963 41 CCTGCACTTCCCGCTGTTCCCTCATGTGAGTGCCGGGGTTG CCTGCACTTCCCGCTGTTCCCTCAAGTGAGTGCCGGGGTTG < 41bp 0.656424007848601 0.886953538523855 0.47402605 0.8574361 prediction 0.461059061350507 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:372943 chr11:372947 nonsynonymous SNV 0.790 3 25 hm5C_associated_SNPs_114987 0 0 2 EFTUD2 POSTAR2 ENCODE chr11:372936-373029
64251 chr20 42695467 42695467 1 + C T SKCM 42695466 + 42695446 42695486 41 GGGACTGGGACAGCAGCTACCCCAGTGGGGAGTGTGGCATC GGGACTGGGACAGCAGCTACCTCAGTGGGGAGTGTGGCATC < 41bp 0.578654567350573 0.809175723733002 0.20673802 0.22382796 prediction 0.461042312764858 Functional Gain - TOX2 ENSG00000124191 CDS Human protein_coding chr20:42695466 chr20:42695467 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_114994 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:42695461-42695488
64251 chrX 12828219 12828219 1 + T A CESC 12828215 + 12828195 12828235 41 TGGATTCGGGAAAACATTGCCGAGTGGAAGAACTGTATCAT TGGATTCGGGAAAACATTGCCGAGAGGAAGAACTGTATCAT < 41bp 0.64772684585524 0.878244968814896 0.46492398 0.6612977 prediction 0.461036245919312 Functional Gain - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12828215 chrX:12828219 nonsynonymous SNV 0.933 4 25 hm5C_associated_SNPs_114996 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:12828194-12828228
64251 chr4 154191516 154191516 1 + C A COAD 154191512 + 154191492 154191532 41 GCGTGCAGGGTCAAAGACAGCCGGCCCCCCATGTCAGTGGT GCGTGCAGGGTCAAAGACAGCCGGACCCCCATGTCAGTGGT < 41bp 0.436970597912716 0.730515926705466 0.23992035 0.4071182 prediction 0.461031853410932 Functional Gain - TRIM2 ENSG00000109654 CDS Human protein_coding chr4:154191512 chr4:154191516 synonymous SNV . 0 25 hm5C_associated_SNPs_114997 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr4:154191500-154191520
64251 chr3 32859669 32859669 1 + T C STAD 32859667 + 32859647 32859687 41 CTCCTCCAACTCGTCCGCGTCGTCGTCCTCCTCGCAGACGT CTCCTCCAACTCGTCCGCGTCGCCGTCCTCCTCGCAGACGT < 41bp 0.516980550098516 0.747492680264931 0.07991725 0.06583923 prediction 0.46102426033283 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32859667 chr3:32859669 nonsynonymous SNV 0.910 2 23 hm5C_associated_SNPs_115001 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:32859645-32859680
64251 chr19 41239252 41239252 1 + C T UCEC 41239251 + 41239231 41239271 41 TCCACCTCTACCCTGGGCTTCCGGATCGAGGGCATCAAGGT TCCACCTCTACCCTGGGCTTCTGGATCGAGGGCATCAAGGT < 41bp 0.565730873977412 0.796239254660269 0.07125446 0.042307556 prediction 0.461016761365715 Functional Gain - ITPKC ENSG00000086544 CDS Human protein_coding chr19:41239251 chr19:41239252 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_115003 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41239229-41239253
64251 chr11 114182861 114182861 1 + C T LUAD 114182860 + 114182840 114182880 41 AGCCAGCCACTGGGGGCCGTCCCCTTACCCCCGGCTGACTG AGCCAGCCACTGGGGGCCGTCTCCTTACCCCCGGCTGACTG < 41bp 0.465905592945467 0.730484923024581 0.09798843 0.44614944 prediction 0.460969846049163 Functional Gain - NNMT ENSG00000166741 CDS Human protein_coding chr11:114182860 chr11:114182861 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115006 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:114182861-114182879
64251 chr9 137533652 137533652 1 + C G rs555826102 137533651 + 137533631 137533671 41 CTCCGCGCCGAAGGCGAGGTCCGCACTCTCCGTCCCCGCGG CTCCGCGCCGAAGGCGAGGTCGGCACTCTCCGTCCCCGCGG < 41bp 0.61795470829809 0.848437809474572 0.20607564 0.83472455 prediction 0.460966202352965 Functional Gain - COL5A1 ENSG00000130635 UTR5 Human protein_coding chr9:137533651 chr9:137533652 . . 0 22 hm5C_associated_SNPs_115007 1 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:137533651-137533652
64251 chr14 103810966 103810966 1 + C G rs9718 103810965 + 103810945 103810985 41 TGCTGCAGTCAGAAGCAATGCCTGGCTGGGGCAGTAGGGGA TGCTGCAGTCAGAAGCAATGCGTGGCTGGGGCAGTAGGGGA < 41bp 0.544243350935373 0.774723321295758 0.19100574 0.49217206 prediction 0.46095994072077 Functional Gain - EIF5 ENSG00000100664 UTR3 Human protein_coding chr14:103810965 chr14:103810966 . . 0 22 hm5C_associated_SNPs_115008 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:103810956-103810984
64251 chr8 22476767 22476767 1 + C G LIHC 22476763 + 22476743 22476783 41 CTGGCGGAGGCCGAGGAGACCGCCCGGACGGCGGAGCGACA CTGGCGGAGGCCGAGGAGACCGCCGGGACGGCGGAGCGACA < 41bp 0.450583223730357 0.730478750731002 0.39185047 0.47609377 prediction 0.460957501462004 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22476763 chr8:22476767 nonsynonymous SNV 0.773 1 25 hm5C_associated_SNPs_115009 0 0 3 FMR1 POSTAR2 ENCODE chr8:22476723-22476792
64251 chr12 72091239 72091239 1 + T C SKCM 72091237 + 72091217 72091257 41 GGCCTGCTCTGCTGGAGACACATGGGCTTCAGAAGTTGGCC GGCCTGCTCTGCTGGAGACACACGGGCTTCAGAAGTTGGCC < 41bp 0.603917722884834 0.834388722068914 0.39526057 0.34679323 prediction 0.46094199836816 Functional Gain - TMEM19 ENSG00000139291 CDS Human protein_coding chr12:72091237 chr12:72091239 nonsynonymous SNV 0.994 4 23 hm5C_associated_SNPs_115016 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:72091215-72091242
64251 chr8 11640784 11640784 1 + A G rs8191642 11640781 + 11640761 11640801 41 CAGTTGTCTTGGAGCTCTTCCCCAGTGGTCACACCCACCTG CAGTTGTCTTGGAGCTCTTCCCCGGTGGTCACACCCACCTG < 41bp 0.469739311837263 0.730470623024068 0.25771388 0.41208038 prediction 0.460941246048136 Functional Gain - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640781 chr8:11640784 synonymous SNV . 0 24 hm5C_associated_SNPs_115017 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:11640761-11640786
64251 chr19 10798154 10798154 1 + C A STAD 10798150 + 10798130 10798170 41 ACTCACCGGTGCCCCCAAAACACGCTGGGAAGAAGCAGCCG ACTCACCGGTGCCCCCAAAACACGATGGGAAGAAGCAGCCG < 41bp 0.707663973531856 0.938132741150942 0.28314757 0.3342877 prediction 0.460937535238173 Functional Gain - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10798150 chr19:10798154 nonsynonymous SNV 0.907 1 25 hm5C_associated_SNPs_115019 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:10798120-10798160
64251 chr10 7751045 7751045 1 + A G LUAD 7751042 + 7751022 7751062 41 TCCAGTCTACTATTACTTCTCGGATGGCCACCACCATGATC TCCAGTCTACTATTACTTCTCGGGTGGCCACCACCATGATC < 41bp 0.538998251474502 0.769457709355941 0.884928 0.92483556 prediction 0.460918915762878 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7751042 chr10:7751045 nonsynonymous SNV 0.747 0 24 hm5C_associated_SNPs_115025 0 0 5 LARP7 POSTAR2 ENCODE chr10:7751030-7751080
64251 chr22 29445592 29445592 1 + C T HNSC 29445591 + 29445571 29445611 41 ATGTACCAGCACTACTACTTCCAGGGCCTCAGCTACCCGGA ATGTACCAGCACTACTACTTCTAGGGCCTCAGCTACCCGGA < 41bp 0.478545137858404 0.730453583346593 0.53930485 0.21659973 prediction 0.460907166693186 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445591 chr22:29445592 stopgain 1.000 1 22 hm5C_associated_SNPs_115027 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr22:29445579-29445599
64251 chr16 9213039 9213039 1 + C G rs370030244 9213038 + 9213018 9213058 41 TCCCATTGCTTTCTCCTTTCCCCGACGCACAGAATAAACAT TCCCATTGCTTTCTCCTTTCCGCGACGCACAGAATAAACAT < 41bp 0.570669489583453 0.801104464162296 0.08725232 0.14230809 prediction 0.460869949157686 Functional Gain - C16orf72 ENSG00000182831 UTR3 Human protein_coding chr16:9213038 chr16:9213039 . . 0 22 hm5C_associated_SNPs_115032 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr16:9213017-9213044
64251 chr20 49195120 49195120 1 + T C UCEC 49195118 + 49195098 49195138 41 GTGGTGCACTGCAGTGCAGGCATCGGCAGGTCTGGAACCTT GTGGTGCACTGCAGTGCAGGCACCGGCAGGTCTGGAACCTT < 41bp 0.456400819816072 0.730433694435509 0.5935179 0.27323303 prediction 0.460867388871018 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49195118 chr20:49195120 nonsynonymous SNV 0.981 5 23 hm5C_associated_SNPs_115034 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr20:49195101-49195122
64251 chr17 1961863 1961863 1 + C T rs188260013 1961862 + 1961842 1961882 41 GGCAAGGGCAAGCTCGACTTCCCCGAGGGCGTCTTTGCTGT GGCAAGGGCAAGCTCGACTTCTCCGAGGGCGTCTTTGCTGT < 41bp 0.50633577368712 0.736753809816727 0.12655792 0.29894245 prediction 0.460836072259215 Functional Gain - HIC1 ENSG00000177374 CDS Human protein_coding chr17:1961862 chr17:1961863 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_115037 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:1961849-1961878
64251 chr1 220970101 220970101 1 + C G rs150126154 220970100 + 220970080 220970120 41 ACTTCGAGCCTCACATGCGACCGAGACGTCCTCATCAAATA ACTTCGAGCCTCACATGCGACGGAGACGTCCTCATCAAATA < 41bp 0.40627496242511 0.730403845722249 0.12419912 0.31326848 prediction 0.460807691444498 Functional Gain - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220970100 chr1:220970101 nonsynonymous SNV 0.068 2 22 hm5C_associated_SNPs_115041 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:220970098-220970122
64251 chr14 105222083 105222083 1 + C T LGG 105222082 + 105222062 105222102 41 AAGCCTGGCCCTACAGGGGCCCCGAGGGCTGCACGTGGGCA AAGCCTGGCCCTACAGGGGCCTCGAGGGCTGCACGTGGGCA < 41bp 0.549373335712305 0.779774952528104 0.39625388 0.67090946 prediction 0.460803233631599 Functional Gain - SIVA1 ENSG00000184990 CDS Human protein_coding chr14:105222082 chr14:105222083 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_115042 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:105221975-105222150
64251 chr1 163039171 163039171 1 + A G LUAD 163039168 + 163039148 163039188 41 AGGAAGACGCTCAGAGGATTCTGACAATATCTTTACCGGAG AGGAAGACGCTCAGAGGATTCTGGCAATATCTTTACCGGAG < 41bp 0.544819052640006 0.775212778440438 0.20812789 0.26071084 prediction 0.460787451600863 Functional Gain - RGS4 ENSG00000117152 CDS Human protein_coding chr1:163039168 chr1:163039171 nonsynonymous SNV 0.309 0 24 hm5C_associated_SNPs_115044 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr1:163039156-163039181
64251 chrX 129171431 129171431 1 + C T HNSC 129171430 + 129171410 129171450 41 AGCCCTGCATGAGGCTTGTTCCCGGGGCTGGACCGACATCC AGCCCTGCATGAGGCTTGTTCTCGGGGCTGGACCGACATCC < 41bp 0.579836892543789 0.810227055926216 0.9157995 0.3256927 prediction 0.460780326764854 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129171430 chrX:129171431 synonymous SNV . 0 22 hm5C_associated_SNPs_115047 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chrX:129171420-129171440
64251 chrX 56592033 56592033 1 + C T UCEC 56592032 + 56592012 56592052 41 GAGCAAATGCTCCACAGCTGCCGAATCCAGAAGTCAGATTT GAGCAAATGCTCCACAGCTGCTGAATCCAGAAGTCAGATTT < 41bp 0.513406394704543 0.74379477891201 0.38516054 0.40649757 prediction 0.460776768414934 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56592032 chrX:56592033 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_115048 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:56592018-56592049
64251 chr12 50869510 50869510 1 + C A UCEC 50869509 + 50869489 50869529 41 AGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCCCAG AGTAAGGATTATTCTGGCTTCAGAGGCAATATAATCCCCAG < 41bp 0.525018083152712 0.755404484288483 0.8875743 0.89768785 prediction 0.460772802271541 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869509 chr12:50869510 synonymous SNV . 0 22 hm5C_associated_SNPs_115049 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:50869431-50869515
64251 chr19 36277637 36277637 1 + C T rs114957589 36277636 + 36277616 36277656 41 CAGCCCCACCCCAGGGGATCCCGCACCTCCCGCCAGCCCAG CAGCCCCACCCCAGGGGATCCTGCACCTCCCGCCAGCCCAG < 41bp 0.565767104679323 0.796139026807005 0.2033683 0.5288532 prediction 0.460743844255364 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36277636 chr19:36277637 synonymous SNV . 0 22 hm5C_associated_SNPs_115055 0 0 2 DDX59 POSTAR2 ENCODE chr19:36277588-36277733
64251 chr2 160035592 160035592 1 + C T COAD 160035591 + 160035571 160035611 41 ATTAAGAGGCGAGACAAAACCCGCATGTTCTGCCACCCGTC ATTAAGAGGCGAGACAAAACCTGCATGTTCTGCCACCCGTC < 41bp 0.575506795256363 0.805873959200738 0.6337571 0.83798254 prediction 0.460734327888751 Functional Gain - TANC1 ENSG00000115183 CDS Human protein_coding chr2:160035591 chr2:160035592 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115057 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:160035592-160035593
64251 chr4 41984871 41984871 1 + C A LUSC 41984870 + 41984850 41984890 41 CCTGCTCAGAACCATCCCTTCCCCGTACTCTGCCTCCGAGG CCTGCTCAGAACCATCCCTTCACCGTACTCTGCCTCCGAGG < 41bp 0.545357602344084 0.775707907196507 0.10263646 0.099779695 prediction 0.460700609704847 Functional Gain - DCAF4L1 ENSG00000182308 CDS Human protein_coding chr4:41984870 chr4:41984871 synonymous SNV . 0 22 hm5C_associated_SNPs_115068 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:41984834-41984904
64251 chr6 147829844 147829844 1 + T G rs73020122 147829841 + 147829821 147829861 41 CAGCCAGTGCCTGCGAGCTCCGCTGCTGCTTGGGGAATTCA CAGCCAGTGCCTGCGAGCTCCGCGGCTGCTTGGGGAATTCA < 41bp 0.371473296999307 0.730341837138005 0.3501196 0.8720337 prediction 0.460683674276011 Functional Gain - SAMD5 ENSG00000203727 upstream Human protein_coding chr6:147829841 chr6:147829844 . . 0 24 hm5C_associated_SNPs_115072 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:147829844-147829845
64251 chr2 203241984 203241984 1 + C G rs560710730 203241983 + 203241963 203242003 41 CGTCCGAGGCGAAGGAACCCCCCCAGCCGCGAGGGAGAGAA CGTCCGAGGCGAAGGAACCCCGCCAGCCGCGAGGGAGAGAA < 41bp 0.496950456772886 0.73033087030203 0.20167467 0.8728299 prediction 0.46066174060406 Functional Gain - BMPR2 ENSG00000204217 UTR5 Human protein_coding chr2:203241983 chr2:203241984 . . 0 22 hm5C_associated_SNPs_115073 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:203241984-203241985
64251 chr20 30414612 30414612 1 + A G UCEC 30414609 + 30414589 30414629 41 TGTGCACACAGCATCGAGGGCGGAGAGCTCTTCGAGAGGAT TGTGCACACAGCATCGAGGGCGGGGAGCTCTTCGAGAGGAT < 41bp 0.481754153959643 0.730328131972155 0.29430157 0.493045 prediction 0.46065626394431 Functional Gain - MYLK2 ENSG00000101306 CDS Human protein_coding chr20:30414609 chr20:30414612 synonymous SNV . 0 24 hm5C_associated_SNPs_115075 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:30414604-30414629
64251 chr2 58373520 58373520 1 + C T SKCM 58373519 + 58373499 58373539 41 AGGTTAATCGAAAAAAAAGTCCACAGTGAGAGAAGCGCTGA AGGTTAATCGAAAAAAAAGTCTACAGTGAGAGAAGCGCTGA < 41bp 0.547926521819234 0.778245565356819 0.08263531 0.29357177 prediction 0.460638087075169 Functional Gain - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58373519 chr2:58373520 nonsynonymous SNV 0.309 0 22 hm5C_associated_SNPs_115079 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:58373515-58373551
64251 chr17 53851150 53851150 1 + C T SKCM 53851149 + 53851129 53851169 41 GAAGATCCATGTGATCCTGGCCCGGAGCACCTCCATGCCTC GAAGATCCATGTGATCCTGGCTCGGAGCACCTCCATGCCTC < 41bp 0.560063042400896 0.790358509598815 0.051158458 0.10544789 prediction 0.460590934395837 Functional Gain - PCTP ENSG00000141179 CDS Human protein_coding chr17:53851149 chr17:53851150 synonymous SNV . 0 22 hm5C_associated_SNPs_115082 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:53851141-53851165
64251 chr22 18028500 18028500 1 + C T rs568030540 18028499 + 18028479 18028519 41 CCACATTCTGGAGGCTTTCCCCGGTATCGCCCCCCACAAGG CCACATTCTGGAGGCTTTCCCTGGTATCGCCCCCCACAAGG < 41bp 0.531861636571439 0.762155363041985 0.71518046 0.7108617 prediction 0.460587452941092 Functional Gain - CECR2 ENSG00000099954 CDS Human protein_coding chr22:18028499 chr22:18028500 nonsynonymous SNV 0.880 3 22 hm5C_associated_SNPs_115083 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:18028473-18028501
64251 chr12 125550167 125550167 1 + C A UCEC 125550166 + 125550146 125550186 41 CGCCCCGGTCGGGAGGAGATCCTGGAGTGCCAGGTGATGTG CGCCCCGGTCGGGAGGAGATCATGGAGTGCCAGGTGATGTG < 41bp 0.472186222429264 0.730292050023021 0.4830699 0.5452586 prediction 0.460584100046042 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125550166 chr12:125550167 nonsynonymous SNV 0.931 0 22 hm5C_associated_SNPs_115084 0 0 1 RPS3 POSTAR2 ENCODE chr12:125550150-125550224
64251 chr18 77105512 77105512 1 + C T SKCM 77105511 + 77105491 77105531 41 TGCTGCCGCTGCTCACCCACCCAGAAGGCCCGCATTGTGAC TGCTGCCGCTGCTCACCCACCTAGAAGGCCCGCATTGTGAC < 41bp 0.574508234414022 0.804792408623554 0.3683337 0.37463987 prediction 0.460568348419064 Functional Gain - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77105511 chr18:77105512 stopgain 0.610 1 22 hm5C_associated_SNPs_115087 0 0 1 PPIG POSTAR2 ENCODE chr18:77105468-77105570
64251 chr6 28093561 28093561 1 - A G UCEC 28093563 - 28093543 28093583 41 CTCTCCAGATCCTCCAGTACCGTCACTGCCTCCTCTCCAGT CTCTCCAGATCCTCCAGTACCGCCACTGCCTCCTCTCCAGT < 41bp 0.601645711056137 0.831923520823965 0.03885284 0.08776128 prediction 0.460555619535656 Functional Gain - ZSCAN16 ENSG00000196812 CDS Human protein_coding chr6:28093563 chr6:28093561 nonsynonymous SNV 0.789 0 23 hm5C_associated_SNPs_115089 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:28093543-28093575
64251 chr16 67877382 67877382 1 + C T STAD 67877381 + 67877361 67877401 41 CTGCTTGCCATGGCTGTCATCCGCAAGAAGCACGGAATGTG CTGCTTGCCATGGCTGTCATCTGCAAGAAGCACGGAATGTG < 41bp 0.541238483757082 0.771502441638487 0.35085624 0.31442824 prediction 0.460527915762809 Functional Gain - THAP11 ENSG00000168286 CDS Human protein_coding chr16:67877381 chr16:67877382 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_115097 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:67877347-67877387
64251 chr19 35232366 35232366 1 + T C rs138712624 35232364 + 35232344 35232384 41 TATGTGGAAAGGCCTTCATTCATAGGTCATCTCTCATTCAC TATGTGGAAAGGCCTTCATTCACAGGTCATCTCTCATTCAC < 41bp 0.470822351060748 0.730260804100679 0.069904864 0.066054314 prediction 0.460521608201359 Functional Gain - ZNF181 ENSG00000197841 CDS Human protein_coding chr19:35232364 chr19:35232366 synonymous SNV . 0 23 hm5C_associated_SNPs_115098 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:35232357-35232389
64251 chr15 49611947 49611947 1 + C T COAD 49611946 + 49611926 49611966 41 AACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAG AACCAGAGCCACATGAGCTGCTGGGACATGTATGAGTGCAG < 41bp 0.533718895683801 0.763977485825333 0.3287784 0.2849089 prediction 0.460517180283063 Functional Gain - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49611946 chr15:49611947 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_115100 0 0 3 PPIG POSTAR2 ENCODE chr15:49611875-49612023
64251 chr1 179064213 179064213 1 + C A UCEC 179064212 + 179064192 179064232 41 CTGTGTGCACGGGATGCCTTCCTGAGCCAGGAGCTCCTGTA CTGTGTGCACGGGATGCCTTCATGAGCCAGGAGCTCCTGTA < 41bp 0.469346363129347 0.730256748456116 0.056164116 0.11118585 prediction 0.460513496912232 Functional Gain - TOR3A ENSG00000186283 CDS Human protein_coding chr1:179064212 chr1:179064213 nonsynonymous SNV 0.912 0 22 hm5C_associated_SNPs_115103 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:179064213-179064214
64251 chr6 138200024 138200024 1 + C T SKCM 138200023 + 138200003 138200043 41 CTGCCATGAAGTGCAGGAGCCCCGGCTGCCCCTTCACACTG CTGCCATGAAGTGCAGGAGCCTCGGCTGCCCCTTCACACTG < 41bp 0.467095953273103 0.730245094652097 0.67360115 0.86695397 prediction 0.460490189304194 Functional Gain - TNFAIP3 ENSG00000118503 CDS Human protein_coding chr6:138200023 chr6:138200024 nonsynonymous SNV 0.893 3 22 hm5C_associated_SNPs_115106 0 0 5 FASTKD2 POSTAR2 ENCODE chr6:138199989-138200025
64251 chr2 29136984 29136984 1 + T C STAD 29136982 + 29136962 29137002 41 TCGTCACTGATGTTCACTACCATCAGACCTCCTAATGAGAG TCGTCACTGATGTTCACTACCACCAGACCTCCTAATGAGAG < 41bp 0.62959843879695 0.859837936559427 0.10947013 0.06651083 prediction 0.460478995524955 Functional Gain - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29136982 chr2:29136984 nonsynonymous SNV 0.967 1 23 hm5C_associated_SNPs_115108 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:29136942-29136987
64251 chr19 58988882 58988882 1 + C G rs553623828 58988878 + 58988858 58988898 41 AGGCAGTCCTGAGGAGGCCGCTGCCCTAGTCGAAGGACTGC AGGCAGTCCTGAGGAGGCCGCTGCGCTAGTCGAAGGACTGC < 41bp 0.430693682106103 0.730237367088861 0.18317214 0.27454162 prediction 0.460474734177721 Functional Gain - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58988878 chr19:58988882 synonymous SNV . 0 25 hm5C_associated_SNPs_115111 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr19:58988856-58988882
64251 chr13 32889656 32889656 1 + C G rs556172218 32889655 + 32889635 32889675 41 ACTAGGCGGCAGAGGCGGAGCCGCTGTGGCACTGCTGCGCC ACTAGGCGGCAGAGGCGGAGCGGCTGTGGCACTGCTGCGCC < 41bp 0.625425188504535 0.855657774797354 0.16879281 0.44612896 prediction 0.460465172585637 Functional Gain - BRCA2 ENSG00000139618 UTR5 Human protein_coding chr13:32889655 chr13:32889656 . . 0 22 hm5C_associated_SNPs_115112 0 0 1 DDX3X POSTAR2 ENCODE chr13:32889656-32889743
64251 chr6 34838841 34838841 1 + C T rs200662691 34838840 + 34838820 34838860 41 TCTTGGAGGATGAGGAGATCCCGGTGGTAGTCCCCATGCAG TCTTGGAGGATGAGGAGATCCTGGTGGTAGTCCCCATGCAG < 41bp 0.485631515307043 0.73022825616527 0.89144844 0.85960686 prediction 0.46045651233054 Functional Gain - UHRF1BP1 ENSG00000065060 CDS Human protein_coding chr6:34838840 chr6:34838841 nonsynonymous SNV 0.957 3 22 hm5C_associated_SNPs_115115 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:34838805-34838857
64251 chr10 12191933 12191933 1 + C T rs10466280 12191932 + 12191912 12191952 41 GGACCCTGCAGAAATGGGTGCCGGAATCTGTCTCCTGATCA GGACCCTGCAGAAATGGGTGCTGGAATCTGTCTCCTGATCA < 41bp 0.545126353272822 0.775348121967598 0.43958992 0.26290584 prediction 0.460443537389552 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12191932 chr10:12191933 synonymous SNV . 0 22 hm5C_associated_SNPs_115117 0 0 1 TBRG4 POSTAR2 ENCODE chr10:12191900-12191936
64251 chr7 73969778 73969778 1 + C T UCEC 73969777 + 73969757 73969797 41 CCTGCCCCCAGAGAGGGATTCCGGGGACCCTCTGGTGGACG CCTGCCCCCAGAGAGGGATTCTGGGGACCCTCTGGTGGACG < 41bp 0.553945860668625 0.784161821731894 0.91184556 0.9016098 prediction 0.460431922126537 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73969777 chr7:73969778 synonymous SNV . 0 22 hm5C_associated_SNPs_115120 0 0 2 PPIG POSTAR2 ENCODE chr7:73969764-73969807
64251 chrX 47058240 47058240 1 + C T HNSC 47058239 + 47058219 47058259 41 GTCCAAGAAACGTCGCGTGTCCGGGCCTGATCCAAAGCCGG GTCCAAGAAACGTCGCGTGTCTGGGCCTGATCCAAAGCCGG < 41bp 0.506308662194403 0.73651802726999 0.3329241 0.27150112 prediction 0.460418730151174 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47058239 chrX:47058240 synonymous SNV . 0 22 hm5C_associated_SNPs_115122 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:47058200-47058240
64251 chr16 67914783 67914783 1 + C G LUSC 67914782 + 67914762 67914802 41 GGATGGAGATCGGCATAATACCCCCTCCCTCCTGGAGGCAG GGATGGAGATCGGCATAATACGCCCTCCCTCCTGGAGGCAG < 41bp 0.415131659593767 0.730208168669449 0.21796799 0.33081937 prediction 0.460416337338898 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914782 chr16:67914783 synonymous SNV . 0 22 hm5C_associated_SNPs_115123 0 0 3 FXR2 POSTAR2 GSE39682,GSM977620 chr16:67914774-67914795
64251 chr7 6062975 6062975 1 + C T UCEC 6062974 + 6062954 6062994 41 TTCAGCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGAA TTCAGCATCCAGACGATGTGCTCCATCGAAGGCGAAGGGAA < 41bp 0.579782598596136 0.809979524688581 0.012142569 0.87615657 prediction 0.46039385218489 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6062974 chr7:6062975 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_115127 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:6062959-6062976
64251 chr11 66435563 66435563 1 + T G rs7120560 66435560 + 66435540 66435580 41 TTCATTACTAACCCCTGAACCTGTACCCTTCAGCTTACCAC TTCATTACTAACCCCTGAACCTGGACCCTTCAGCTTACCAC < 41bp 0.416151176813362 0.730194324808844 0.017618 0.041897297 prediction 0.460388649617688 Functional Gain - RBM4 ENSG00000258297 ncRNA_exonic Human antisense chr11:66435560 chr11:66435563 . . 0 24 hm5C_associated_SNPs_115128 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:66435526-66435648
64251 chr7 150020526 150020526 1 + C G rs3735173 150020525 + 150020505 150020545 41 GGCCCAGGGGTCAGGGGCCGCCAGGCGGCGGGCGGCGGGGC GGCCCAGGGGTCAGGGGCCGCGAGGCGGCGGGCGGCGGGGC < 41bp 0.618817027858714 0.849010477029763 0.8990042 0.9042655 prediction 0.460386898342098 Functional Gain - LRRC61 ENSG00000127399 UTR5 Human protein_coding chr7:150020525 chr7:150020526 . . 0 22 hm5C_associated_SNPs_115130 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr7:150020525-150020526
64251 chr11 70189923 70189923 1 + C T SKCM 70189922 + 70189902 70189942 41 GCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCG GCTCAGTTGACCTGCTATCGCTCAGCGGGCAGGCCGACGCG < 41bp 0.559784532813007 0.789975816437483 0.21996024 0.06514487 prediction 0.460382567248952 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70189922 chr11:70189923 nonsynonymous SNV 0.112 3 22 hm5C_associated_SNPs_115131 0 0 2 FXR2 POSTAR2 ENCODE chr11:70189912-70189962
64251 chr6 107955499 107955499 1 + C T LUAD 107955498 + 107955478 107955518 41 CCCCGCCGCCTCCGGGCGCCCCGCTGCCGAGTCTTCCCTTC CCCCGCCGCCTCCGGGCGCCCTGCTGCCGAGTCTTCCCTTC < 41bp 0.528467341852581 0.758655260638553 0.14130503 0.2544377 prediction 0.460375837571944 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107955498 chr6:107955499 nonsynonymous SNV 0.749 2 22 hm5C_associated_SNPs_115133 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:107955439-107955508
64251 chr20 42089646 42089646 1 + C T SKCM 42089645 + 42089625 42089665 41 AAAAAGAGCTACTTCAAGATCCCGTTCTAGATCTCGCTCAA AAAAAGAGCTACTTCAAGATCTCGTTCTAGATCTCGCTCAA < 41bp 0.550495390765241 0.780681435567967 0.0960944 0.1077818 prediction 0.460372089605451 Functional Gain - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42089645 chr20:42089646 synonymous SNV . 0 22 hm5C_associated_SNPs_115135 0 0 16 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:42089513-42089664
64251 chr16 31089288 31089288 1 + C T UCEC 31089287 + 31089267 31089307 41 CAGTGGAGGCAGAGGCAGCCCCGCACACAGATCAGGACCAT CAGTGGAGGCAGAGGCAGCCCTGCACACAGATCAGGACCAT < 41bp 0.500936685670503 0.731116693143895 0.13572237 0.11006528 prediction 0.460360014946784 Functional Gain - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089287 chr16:31089288 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115136 0 0 2 EIF3H POSTAR2 ENCODE chr16:31089235-31089317
64251 chr22 25855404 25855404 1 + T C STAD 25855402 + 25855382 25855422 41 GGTGGGTTGGCTACTAGTACCCTGGCTACCGTGGGCTGCAG GGTGGGTTGGCTACTAGTACCCCGGCTACCGTGGGCTGCAG < 41bp 0.555833193312914 0.786010632697087 0.34003088 0.51459515 prediction 0.460354878768346 Functional Gain - CRYBB2P1 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25855402 chr22:25855404 . . 0 23 hm5C_associated_SNPs_115138 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:25855398-25855422
64251 chr7 140379030 140379030 1 + C T SKCM 140379029 + 140379009 140379049 41 AATGTGAAAGCCGTCAAGTTCCCCACCCCTCTGCGCCCCTT AATGTGAAAGCCGTCAAGTTCTCCACCCCTCTGCGCCCCTT < 41bp 0.61188633386722 0.842057658325548 0.02016595 0.8235871 prediction 0.460342648916656 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140379029 chr7:140379030 nonsynonymous SNV 0.908 4 22 hm5C_associated_SNPs_115142 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:140379014-140379040
64251 chr9 103035265 103035265 1 + C A GBM 103035261 + 103035241 103035281 41 ACATCGCCGCCTTCAAAATCCAAGCTGTCTACAAAGGGTAC ACATCGCCGCCTTCAAAATCCAAGATGTCTACAAAGGGTAC < 41bp 0.313426438454603 0.730166380510004 0.25249362 0.22741696 prediction 0.460332761020009 Functional Gain - INVS ENSG00000119509 CDS Human protein_coding chr9:103035261 chr9:103035265 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_115143 0 0 1 GRWD1 POSTAR2 ENCODE chr9:103035245-103035303
64251 chr6 36020527 36020527 1 + C T BLCA 36020526 + 36020506 36020546 41 TGTGGCAGTGAAGAAGCTCTCCAGACCATTTCAGTCCATCA TGTGGCAGTGAAGAAGCTCTCTAGACCATTTCAGTCCATCA < 41bp 0.564486760624834 0.79465033684832 0.71637654 0.4450447 prediction 0.460327152446971 Functional Gain - MAPK14 ENSG00000112062 CDS Human protein_coding chr6:36020526 chr6:36020527 synonymous SNV . 0 22 hm5C_associated_SNPs_115145 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr6:36020492-36020532
64251 chr3 5024782 5024782 1 + C T SKCM 5024781 + 5024761 5024801 41 CGGCCAAAGGTTCGGAAGGTCCTGGGAAAAACTGCGTGCCA CGGCCAAAGGTTCGGAAGGTCTTGGGAAAAACTGCGTGCCA < 41bp 0.500379496852452 0.730521927427106 0.5471241 0.35083765 prediction 0.460284861149308 Functional Gain - BHLHE40 ENSG00000134107 CDS Human protein_coding chr3:5024781 chr3:5024782 nonsynonymous SNV 0.967 0 22 hm5C_associated_SNPs_115151 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:5024769-5024797
64251 chr17 45608609 45608609 1 + C A rs572926933 45608605 + 45608585 45608625 41 CCCTAGCGCTCCGGCTGGGTCTCTCCCCCGCCCCCCAGGCT CCCTAGCGCTCCGGCTGGGTCTCTACCCCGCCCCCCAGGCT < 41bp 0.418391776471803 0.730139926572874 0.28977466 0.69044715 prediction 0.460279853145748 Functional Gain - NPEPPS ENSG00000141279 UTR5 Human protein_coding chr17:45608605 chr17:45608609 . . 0 25 hm5C_associated_SNPs_115153 0 0 3 DDX59 POSTAR2 ENCODE chr17:45608536-45608611
64251 chr12 123342726 123342726 1 + C A UCEC 123342725 + 123342705 123342745 41 GCGGGGCGCTGCTGCCGAGGCCGCGGGCATCCTGCAGGATG GCGGGGCGCTGCTGCCGAGGCAGCGGGCATCCTGCAGGATG < 41bp 0.473816509132753 0.730135717471108 0.72306156 0.67644835 prediction 0.460271434942217 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123342725 chr12:123342726 synonymous SNV . 0 22 hm5C_associated_SNPs_115156 0 0 2 BUD13 POSTAR2 ENCODE chr12:123342603-123342735
64251 chr1 45809251 45809251 1 + T C STAD 45809249 + 45809229 45809269 41 GCAGCTCTGGACCCTGGCTCCCTGAATGCCACAATAAGGTA GCAGCTCTGGACCCTGGCTCCCCGAATGCCACAATAAGGTA < 41bp 0.454822201762777 0.73013439526053 0.24220052 0.36493254 prediction 0.460268790521061 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45809249 chr1:45809251 synonymous SNV . 0 23 hm5C_associated_SNPs_115157 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45809229-45809262
64251 chr18 12012173 12012173 1 + C T SKCM 12012172 + 12012152 12012192 41 TCTATTTTCCTTTGCAGATTCCCGACTGTGGCGGTTAGCAT TCTATTTTCCTTTGCAGATTCTCGACTGTGGCGGTTAGCAT < 41bp 0.585222379266524 0.815346204053087 0.11862156 0.317206 prediction 0.460247649573126 Functional Gain - IMPA2 ENSG00000141401 CDS Human protein_coding chr18:12012172 chr18:12012173 nonsynonymous SNV 0.435 4 22 hm5C_associated_SNPs_115162 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:12012168-12012199
64251 chr7 134849203 134849203 1 + C T SKCM 134849202 + 134849182 134849222 41 AGGGCAGTAGAGATGGCCGGCCCAAGGCCTCGGTGGCGCGA AGGGCAGTAGAGATGGCCGGCTCAAGGCCTCGGTGGCGCGA < 41bp 0.514659571465758 0.74476575016354 0.3847464 0.48188162 prediction 0.460212357395563 Functional Gain - TMEM140 ENSG00000146859 CDS Human protein_coding chr7:134849202 chr7:134849203 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115167 0 0 2 RPS3 POSTAR2 ENCODE chr7:134849168-134849227
64251 chr6 158353276 158353276 1 + C T SKCM 158353275 + 158353255 158353295 41 AAAGGCCTTGCAGAGTTTGGCCACAGTGTTCAGTTCCAGTG AAAGGCCTTGCAGAGTTTGGCTACAGTGTTCAGTTCCAGTG < 41bp 0.466342864369562 0.730103795916425 0.3001009 0.36916292 prediction 0.460207591832851 Functional Gain - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158353275 chr6:158353276 synonymous SNV . 0 22 hm5C_associated_SNPs_115168 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr6:158353262-158353283
64251 chrX 209836 209836 1 + C G rs150920187 209835 + 209815 209855 41 GTGGGGAAACAGGGTGAAGACCGAGGCCCTCATCCGATACC GTGGGGAAACAGGGTGAAGACGGAGGCCCTCATCCGATACC < 41bp 0.406036196835333 0.730101537598988 0.9118173 0.91800785 prediction 0.460203075197976 Functional Gain - PLCXD1 ENSG00000182378 CDS Human protein_coding chrX:209835 chrX:209836 synonymous SNV . 0 22 hm5C_associated_SNPs_115170 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chrX:209811-209843
64251 chr12 3049882 3049882 1 + T A UCEC 3049878 + 3049858 3049898 41 CTGTTGTTCCTGCACCACATCAGATAAGCATGTGAAGGAGG CTGTTGTTCCTGCACCACATCAGAAAAGCATGTGAAGGAGG < 41bp 0.61374390928558 0.843830629548021 0.38920605 0.28711113 prediction 0.460173440524881 Functional Gain - TULP3 ENSG00000078246 CDS Human protein_coding chr12:3049878 chr12:3049882 nonsynonymous SNV 0.006 2 25 hm5C_associated_SNPs_115173 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:3049880-3049924
64251 chr19 7682830 7682830 1 + C T UCEC 7682829 + 7682809 7682849 41 TCGGACCGCAAGCGCTTCACCCAGATCCCCGCCAAGACCAT TCGGACCGCAAGCGCTTCACCTAGATCCCCGCCAAGACCAT < 41bp 0.487995938015722 0.73008640158814 0.008298039 0.0050807297 prediction 0.46017280317628 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7682829 chr19:7682830 stopgain 1.000 0 22 hm5C_associated_SNPs_115174 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7682817-7682844
64251 chr7 86794313 86794313 1 + T G SKCM 86794310 + 86794290 86794330 41 AACAGTAGAAACTGTGAACTCTGTGACTTTGACTCAGGACA AACAGTAGAAACTGTGAACTCTGGGACTTTGACTCAGGACA < 41bp 0.40092813084279 0.730085553750376 0.16065148 0.322104 prediction 0.460171107500753 Functional Gain - DMTF1 ENSG00000135164 CDS Human protein_coding chr7:86794310 chr7:86794313 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_115175 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:86794246-86794342
64251 chr19 49132182 49132182 1 + C T BLCA 49132181 + 49132161 49132201 41 CTCGCCACACTGCACACCTACCGCGGACGCCTCTCCTACCT CTCGCCACACTGCACACCTACTGCGGACGCCTCTCCTACCT < 41bp 0.478000651521208 0.730064874354573 0.3822874 0.38761288 prediction 0.460129748709146 Functional Gain - SPHK2 ENSG00000063176 CDS Human protein_coding chr19:49132181 chr19:49132182 nonsynonymous SNV 0.797 2 22 hm5C_associated_SNPs_115185 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:49132164-49132211
64251 chr1 165624646 165624646 1 + C A UCEC 165624642 + 165624622 165624662 41 CGAGGAGCCCTGGGGTCCATCGCCCTCCTGGGCTTGGTGGG CGAGGAGCCCTGGGGTCCATCGCCATCCTGGGCTTGGTGGG < 41bp 0.704304883526334 0.934366565936083 0.26457208 0.86664206 prediction 0.460123364819498 Functional Gain - MGST3 ENSG00000143198 CDS Human protein_coding chr1:165624642 chr1:165624646 nonsynonymous SNV 0.829 1 25 hm5C_associated_SNPs_115186 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:165624611-165624727
64251 chr16 68330381 68330381 1 + C T rs193099058 68330380 + 68330360 68330400 41 GTTGTTGGACAGCTCTACCTCCGCTGGAAGGAGCCCAAGCG GTTGTTGGACAGCTCTACCTCTGCTGGAAGGAGCCCAAGCG < 41bp 0.476659487239061 0.730052090387684 0.3691427 0.30244887 prediction 0.460104180775367 Functional Gain - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68330380 chr16:68330381 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_115191 0 0 2 PRPF8 POSTAR2 ENCODE chr16:68330380-68330457
64251 chr12 123950408 123950408 1 + A G rs28728202 123950405 + 123950385 123950425 41 AAGGAGGAGCGTGCCGTGATCAAAGCTTACCGAGATGCTGA AAGGAGGAGCGTGCCGTGATCAAGGCTTACCGAGATGCTGA < 41bp 0.500956313634249 0.731000464403885 0.49665573 0.7435243 prediction 0.46008830153927 Functional Gain - SNRNP35 ENSG00000184209 CDS Human protein_coding chr12:123950405 chr12:123950408 synonymous SNV . 0 24 hm5C_associated_SNPs_115194 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221664 chr12:123950400-123950420
64251 chr19 17337659 17337659 1 + C A rs200297320 17337658 + 17337638 17337678 41 GGGGGCACCTGCATACTCACCCGCCTGGGCCTGGGCCCCCG GGGGGCACCTGCATACTCACCAGCCTGGGCCTGGGCCCCCG < 41bp 0.559657737322071 0.789700648201609 0.19923407 0.54243594 prediction 0.460085821759075 Functional Gain - OCEL1 ENSG00000099330 CDS Human protein_coding chr19:17337658 chr19:17337659 nonsynonymous SNV 0.201 2 22 hm5C_associated_SNPs_115195 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:17337648-17337678
64251 chr10 5951235 5951235 1 + C T COAD 5951234 + 5951214 5951254 41 CGTGTGTGCGGCAACACCTCCCCGACCTCTACGCTGCTGCC CGTGTGTGCGGCAACACCTCCTCGACCTCTACGCTGCTGCC < 41bp 0.58313760715284 0.813166409678353 0.38022462 0.7750406 prediction 0.460057605051027 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951234 chr10:5951235 nonsynonymous SNV 0.051 1 22 hm5C_associated_SNPs_115198 0 0 6 BUD13 POSTAR2 ENCODE chr10:5951234-5951300
64251 chr4 184233578 184233578 1 + C T SKCM 184233577 + 184233557 184233597 41 TCCAAGGACGTGTGTCGGCTCCGGGAGCAGAGCCAGAAGGT TCCAAGGACGTGTGTCGGCTCTGGGAGCAGAGCCAGAAGGT < 41bp 0.490540736928952 0.730028561172082 0.92793 0.91234034 prediction 0.460057122344165 Functional Gain - WWC2 ENSG00000151718 CDS Human protein_coding chr4:184233577 chr4:184233578 nonsynonymous SNV 0.905 4 22 hm5C_associated_SNPs_115199 0 0 12 EIF3G POSTAR2 GSE65004,GSM1585674 chr4:184233560-184233578
64251 chr8 145247303 145247303 1 + A G UCEC 145247300 + 145247280 145247320 41 CCTCTTGGCTGCACTGCACTCCCAGGTAGGAGGCGGGCGTC CCTCTTGGCTGCACTGCACTCCCGGGTAGGAGGCGGGCGTC < 41bp 0.48511656892039 0.730012374774054 0.3185114 0.63083315 prediction 0.460024749548108 Functional Gain - MROH1 ENSG00000179832 CDS Human protein_coding chr8:145247300 chr8:145247303 nonsynonymous SNV 0.859 3 24 hm5C_associated_SNPs_115203 0 0 3 BUD13 POSTAR2 ENCODE chr8:145247282-145247303
64251 chr17 68165710 68165710 1 + C A rs370696463 68165709 + 68165689 68165729 41 CTGGCCAGCGCGCAGCCTTCCCGGCGCCGGCGGGCTGGGTC CTGGCCAGCGCGCAGCCTTCCAGGCGCCGGCGGGCTGGGTC < 41bp 0.547067317121001 0.777062618105185 0.8518294 0.91215163 prediction 0.459990601968368 Functional Gain - KCNJ2 ENSG00000123700 UTR5 Human protein_coding chr17:68165709 chr17:68165710 . . 0 22 hm5C_associated_SNPs_115209 3 0 1 SSB POSTAR2 GSE95683,GSM2521599 chr17:68165708-68165746
64251 chr10 5789017 5789017 1 + C G ESCA 5789013 + 5788993 5789033 41 GGTTGAAGTGGACTCATCATCAGCCTCTACCACCTTGGGAA GGTTGAAGTGGACTCATCATCAGCGTCTACCACCTTGGGAA < 41bp 0.448477622361742 0.72999497455034 0.28566045 0.862792 prediction 0.45998994910068 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5789013 chr10:5789017 synonymous SNV . 0 25 hm5C_associated_SNPs_115210 0 0 10 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5788819-5789029
64251 chr6 26157187 26157187 1 + A G COAD 26157184 + 26157164 26157204 41 AAAGGCGCCCAAGAGCCCAGCGAAGGCCAAAGCAGTTAAAC AAAGGCGCCCAAGAGCCCAGCGAGGGCCAAAGCAGTTAAAC < 41bp 0.4931839292931 0.72999356099521 0.4064009 0.743894 prediction 0.45998712199042 Functional Gain - HIST1H1E ENSG00000168298 CDS Human protein_coding chr6:26157184 chr6:26157187 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_115211 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:26156940-26157320
64251 chr19 50188193 50188193 1 + T A UCEC 50188189 + 50188169 50188209 41 GCCTCCCCAGGGTGGGAGAACGTGTATGGCTTCGACATGTC GCCTCCCCAGGGTGGGAGAACGTGAATGGCTTCGACATGTC < 41bp 0.645766495620567 0.875757213851269 0.51054806 0.66490245 prediction 0.459981436461405 Functional Gain - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50188189 chr19:50188193 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_115213 0 0 20 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:50188180-50188200
64251 chr17 38327577 38327577 1 + A G rs73306851 38327574 + 38327554 38327594 41 GGGTGTGTATTCACATAGTCCTCAGGGCTCAGTCTTTTGAG GGGTGTGTATTCACATAGTCCTCGGGGCTCAGTCTTTTGAG < 41bp 0.538258036643806 0.768237596681854 0.045178413 0.12524629 prediction 0.459959120076097 Functional Gain - CASC3 ENSG00000108349 UTR3 Human protein_coding chr17:38327574 chr17:38327577 . . 0 24 hm5C_associated_SNPs_115218 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38327517-38327605
64251 chrX 100364548 100364548 1 + C A UCEC 100364544 + 100364524 100364564 41 TCTGTGGTTAAGGCAGTCTCCTGGCTTTGTGTTGGCAAGTG TCTGTGGTTAAGGCAGTCTCCTGGATTTGTGTTGGCAAGTG < 41bp 0.704458496373069 0.934436494368221 0.26352918 0.51217246 prediction 0.459955995990305 Functional Gain - CENPI ENSG00000102384 CDS Human protein_coding chrX:100364544 chrX:100364548 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_115219 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chrX:100364518-100364563
64251 chr18 3457607 3457607 1 + C G rs2229333 3457606 + 3457586 3457626 41 TGTCTCCTAAGCCGTCATCCCCGGGATCAGTTTTGGCTCGT TGTCTCCTAAGCCGTCATCCCGGGGATCAGTTTTGGCTCGT < 41bp 0.643485008038092 0.873456689206051 0.89531744 0.92401516 prediction 0.459943362335919 Functional Gain - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457606 chr18:3457607 nonsynonymous SNV 0.014 4 22 hm5C_associated_SNPs_115222 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr19 35501096 35501096 1 + C G LIHC 35501095 + 35501075 35501115 41 CAACATCTTCCGCTGGGAGACCACGGTGAGCCCGCAGCGGG CAACATCTTCCGCTGGGAGACGACGGTGAGCCCGCAGCGGG < 41bp 0.406234817515325 0.729971046627409 0.356162 0.3975929 prediction 0.459942093254818 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35501095 chr19:35501096 synonymous SNV . 0 22 hm5C_associated_SNPs_115224 0 0 4 GEMIN5 POSTAR2 ENCODE chr19:35501051-35501098
64251 chr16 68877538 68877538 1 + C A STAD 68877537 + 68877517 68877557 41 AGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGG AGTCATGGCGGCCCGACAGGCAGTGGGCAGCGGGGCTCAGG < 41bp 0.475147123123109 0.729966294808263 0.19752616 0.32066423 prediction 0.459932589616526 Functional Gain - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68877537 chr16:68877538 synonymous SNV . 0 22 hm5C_associated_SNPs_115225 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:68877533-68877571
64251 chr4 6826344 6826344 1 + T C COAD 6826342 + 6826322 6826362 41 GAGAAATGTGGCATTGATGCCATGATTTACACTCGGTATGT GAGAAATGTGGCATTGATGCCACGATTTACACTCGGTATGT < 41bp 0.609846945316229 0.839804291112496 0.3549013 0.10197139 prediction 0.459914691592534 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6826342 chr4:6826344 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_115228 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:6826337-6826361
64251 chr9 75784009 75784009 1 + T C STAD 75784007 + 75783987 75784027 41 GTTTCCCGTTCTGAAATTGACATGAATGATATCAAAGCATT GTTTCCCGTTCTGAAATTGACACGAATGATATCAAAGCATT < 41bp 0.616266188185306 0.846213649953748 0.21159747 0.13733855 prediction 0.459894923536884 Functional Gain - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75784007 chr9:75784009 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_115231 0 0 1 RPS3 POSTAR2 ENCODE chr9:75783948-75784018
64251 chr12 123339903 123339903 1 + C T UCEC 123339902 + 123339882 123339922 41 AGGCCCCGGAAGATGAGGAGCCGGAGAATCTCATTGAGATC AGGCCCCGGAAGATGAGGAGCTGGAGAATCTCATTGAGATC < 41bp 0.480813197076127 0.729943206911561 0.8535681 0.6524812 prediction 0.459886413823121 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123339902 chr12:123339903 nonsynonymous SNV 0.954 2 22 hm5C_associated_SNPs_115233 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr12:123339866-123339907
64251 chr2 190327291 190327291 1 + C T SKCM 190327290 + 190327270 190327310 41 AGAAGAATAAGGAGTTTCTCCCGCGTTTAGGAGCTACTATT AGAAGAATAAGGAGTTTCTCCTGCGTTTAGGAGCTACTATT < 41bp 0.541362859206291 0.771303044472189 0.20000198 0.15648699 prediction 0.459880370531796 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190327290 chr2:190327291 nonsynonymous SNV 0.868 4 22 hm5C_associated_SNPs_115234 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:190327228-190327300
64251 chr13 114149937 114149937 1 + C T rs185071949 114149936 + 114149916 114149956 41 GCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTG GCTTCTTCTGGGTGCTGTTTCTCGTCCTTCCCTGGGCGGTG < 41bp 0.525479935551703 0.755418985674665 0.21863729 0.27549812 prediction 0.459878100245925 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114149936 chr13:114149937 nonsynonymous SNV 0.029 0 22 hm5C_associated_SNPs_115236 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:114149920-114149956
64251 chr19 10225224 10225224 1 + T C KIRC 10225222 + 10225202 10225242 41 GTGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCC GTGATGCGGGGCCTCATGCCCCCGGCCTTCTGTGTCCACCC < 41bp 0.496595380920104 0.729936409490164 0.34755874 0.5014987 prediction 0.459872818980327 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225222 chr19:10225224 nonsynonymous SNV 0.677 3 23 hm5C_associated_SNPs_115238 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10225186-10225268
64251 chr2 112686742 112686742 1 + C T rs150870104 112686741 + 112686721 112686761 41 CCAAGCCTTACCCGCTATTCCCGGGACCTTTTCCAGGGAGC CCAAGCCTTACCCGCTATTCCTGGGACCTTTTCCAGGGAGC < 41bp 0.4987330225005 0.729929411850267 0.9012378 0.75990206 prediction 0.459858823700534 Functional Gain - MERTK ENSG00000153208 CDS Human protein_coding chr2:112686741 chr2:112686742 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_115239 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:112686735-112686760
64251 chr17 36891668 36891668 1 - G T LIHC 36891669 - 36891649 36891689 41 CTCCCTGCCCAGCCCAGCCACCCCATCCCATGGCTCTCCCA CTCCCTGCCCAGCCCAGCCACACCATCCCATGGCTCTCCCA < 41bp 0.550503108343179 0.780431887688941 0.52476853 0.8317411 prediction 0.459857558691525 Functional Gain - PCGF2 ENSG00000056661 CDS Human other chr17:36891669 chr17:36891668 synonymous SNV . 0 22 hm5C_associated_SNPs_115240 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:36891647-36891672
64251 chr4 39472863 39472863 1 + T C KIRC 39472861 + 39472841 39472881 41 CTTTTCTTCCTACAGCACTTCGTGAGGCAGATGTAGACTGC CTTTTCTTCCTACAGCACTTCGCGAGGCAGATGTAGACTGC < 41bp 0.621108894839938 0.851034474027866 0.20758834 0.43643093 prediction 0.459851158375855 Functional Gain - LIAS ENSG00000121897 CDS Human protein_coding chr4:39472861 chr4:39472863 synonymous SNV . 0 23 hm5C_associated_SNPs_115241 0 0 2 BUD13 POSTAR2 ENCODE chr4:39472839-39472928
64251 chr7 148921569 148921569 1 + A G BRCA 148921566 + 148921546 148921586 41 GCAAGAGCTTCATCCGCAAGCAGAACCTGCTCAAGCACCAG GCAAGAGCTTCATCCGCAAGCAGGACCTGCTCAAGCACCAG < 41bp 0.517132247579932 0.747057443732092 0.14374736 0.33113295 prediction 0.45985039230432 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148921566 chr7:148921569 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_115242 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr7:148921538-148921584
64251 chr13 111368263 111368263 1 + A G PAAD 111368260 + 111368240 111368280 41 TCGGGGCCGGGGCTGCAGTTCGGACCGCCTCCCGCGACCCG TCGGGGCCGGGGCTGCAGTTCGGGCCGCCTCCCGCGACCCG < 41bp 0.535965643622417 0.765884816869488 0.8896644 0.9270921 prediction 0.459838346494143 Functional Gain - ING1 ENSG00000153487 CDS Human protein_coding chr13:111368260 chr13:111368263 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_115244 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr13:111368262-111368263
64251 chrX 47106619 47106619 1 + C T UCEC 47106618 + 47106598 47106638 41 ACCCTCGTGGAGTTTCCTATCCGGTCAGGGGCCAGGGAGAG ACCCTCGTGGAGTTTCCTATCTGGTCAGGGGCCAGGGAGAG < 41bp 0.546848770239266 0.776765797465353 0.71528137 0.25753242 prediction 0.459834054452175 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47106618 chrX:47106619 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_115245 0 0 1 DDX55 POSTAR2 ENCODE chrX:47106571-47106621
64251 chr1 9657064 9657064 1 + C A LIHC 9657063 + 9657043 9657083 41 TGCAAGAGGTGCAACCACCACCAGACCACCAAGATCAAGCA TGCAAGAGGTGCAACCACCACAAGACCACCAAGATCAAGCA < 41bp 0.465206618545545 0.729904562204674 0.13591778 0.19784483 prediction 0.459809124409347 Functional Gain - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9657063 chr1:9657064 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115250 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:9657039-9657066
64251 chr9 136892441 136892441 1 + C A rs398247 136892437 + 136892417 136892457 41 GCTAGATGCTTGGTTTAAACCAGGCCAAGAGTAACCCTCCC GCTAGATGCTTGGTTTAAACCAGGACAAGAGTAACCCTCCC < 41bp 0.687953146183221 0.917853962369373 0.8393861 0.56964886 prediction 0.459801632372304 Functional Gain - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136892437 chr9:136892441 . . 0 25 hm5C_associated_SNPs_115252 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136892401-136892445
64251 chr1 244219965 244219965 1 + C A rs575317188 244219964 + 244219944 244219984 41 CTCCCTCCCTTACTCTCCCCCCCCACCACCACCCTCCACCC CTCCCTCCCTTACTCTCCCCCACCACCACCACCCTCCACCC < 41bp 0.488826574492659 0.729895977851466 0.009269446 0.024843097 prediction 0.459791955702933 Functional Gain - ZBTB18 ENSG00000179456 UTR3 Human protein_coding chr1:244219964 chr1:244219965 . . 0 22 hm5C_associated_SNPs_115254 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:244219960-244219980
64251 chr4 178274739 178274739 1 + T G GBM 178274736 + 178274716 178274756 41 CCCTCCAAGAAGACAACAAACGATATAACTCAACCATCCAG CCCTCCAAGAAGACAACAAACGAGATAACTCAACCATCCAG < 41bp 0.679610766828755 0.909503360546375 0.35321373 0.8723324 prediction 0.459785187435239 Functional Gain - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274736 chr4:178274739 nonsynonymous SNV 0.065 0 24 hm5C_associated_SNPs_115257 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr4:178274720-178274780
64251 chr5 140033627 140033627 1 + T G COAD 140033624 + 140033604 140033644 41 GGTGAAAGGCTTGGATTTTGCTCTGCTTCAAAAGGTGAGTC GGTGAAAGGCTTGGATTTTGCTCGGCTTCAAAAGGTGAGTC < 41bp 0.694986469366273 0.924872995314693 0.07291594 0.11412457 prediction 0.459773051896839 Functional Gain - IK ENSG00000113141 CDS Human protein_coding chr5:140033624 chr5:140033627 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_115262 0 0 2 GRWD1 POSTAR2 ENCODE chr5:140033625-140033636
64251 chr10 45938873 45938873 1 + C A UCEC 45938872 + 45938852 45938892 41 CCCCTGAGCCAGGTTCACGGCCGAGGTGGTAGACATCTACT CCCCTGAGCCAGGTTCACGGCAGAGGTGGTAGACATCTACT < 41bp 0.46535258906005 0.729886389058958 0.6384177 0.80806893 prediction 0.459772778117915 Functional Gain - ALOX5 ENSG00000012779 CDS Human protein_coding chr10:45938872 chr10:45938873 synonymous SNV . 0 22 hm5C_associated_SNPs_115264 0 0 2 GEMIN5 POSTAR2 ENCODE chr10:45938850-45938892
64251 chr17 75199695 75199695 1 + C G HNSC 75199694 + 75199674 75199714 41 CAGGCTGGGGCAGATGGACACCAAAGGCTTGGTGAGAGCGC CAGGCTGGGGCAGATGGACACGAAAGGCTTGGTGAGAGCGC < 41bp 0.409632721449741 0.729886222633218 0.14938238 0.6874377 prediction 0.459772445266437 Functional Gain - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75199694 chr17:75199695 synonymous SNV . 0 22 hm5C_associated_SNPs_115265 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr17:75199694-75199695
64251 chr19 16345884 16345884 1 + T A rs540166403 16345880 + 16345860 16345900 41 GCACCTGGCGCGCTCGGGGGCCACTGTAGCGTCTGCCTGCT GCACCTGGCGCGCTCGGGGGCCACAGTAGCGTCTGCCTGCT < 41bp 0.452191458472102 0.729885979876502 0.4072722 0.71011305 prediction 0.459771959753005 Functional Gain - AP1M1 ENSG00000072958 UTR3 Human protein_coding chr19:16345880 chr19:16345884 . . 0 25 hm5C_associated_SNPs_115266 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:16345849-16345884
64251 chr17 78409975 78409975 1 + A G BLCA 78409972 + 78409952 78409992 41 GTGAGAGCACACGTCCTCGTCTCATTCCTGATCGAACGCGG GTGAGAGCACACGTCCTCGTCTCGTTCCTGATCGAACGCGG < 41bp 0.52296129818984 0.752824136880217 0.12421796 0.11454889 prediction 0.459725677380754 Functional Gain - ENDOV ENSG00000173818 CDS Human protein_coding chr17:78409972 chr17:78409975 nonsynonymous SNV 0.036 0 24 hm5C_associated_SNPs_115271 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:78409937-78410000
64251 chrX 129499521 129499521 1 + C A UCEC 129499517 + 129499497 129499537 41 TTAAACTTTTCCTCTTAGTTCCAGCTTTACATGTGGTTTGG TTAAACTTTTCCTCTTAGTTCCAGATTTACATGTGGTTTGG < 41bp 0.374767378034943 0.72983943005566 0.39362115 0.5996765 prediction 0.459678860111321 Functional Gain - SLC25A14 ENSG00000102078 CDS Human protein_coding chrX:129499517 chrX:129499521 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_115277 0 0 1 U2AF2 POSTAR2 ENCODE chrX:129499512-129499571
64251 chr19 44590007 44590007 1 + C A rs200136517 44590003 + 44589983 44590023 41 ATAAGTAGCTCTCAGTTCTCCACACAAGGTGATGTCCCCTC ATAAGTAGCTCTCAGTTCTCCACAAAAGGTGATGTCCCCTC < 41bp 0.330808112640249 0.729830814047567 0.17231315 0.1822192 prediction 0.459661628095135 Functional Gain - ZNF284 ENSG00000186026 CDS Human protein_coding chr19:44590003 chr19:44590007 nonsynonymous SNV 0.036 0 25 hm5C_associated_SNPs_115279 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:44589977-44590009
64251 chr13 40229983 40229983 1 + T C COAD 40229981 + 40229961 40230001 41 ACCCGCTGTCGCGCAAGCTGCATAAGATCCTGGAGACGCGG ACCCGCTGTCGCGCAAGCTGCACAAGATCCTGGAGACGCGG < 41bp 0.565948445973861 0.795776267700683 0.14630821 0.13457203 prediction 0.459655643453645 Functional Gain - COG6 ENSG00000133103 CDS Human protein_coding chr13:40229981 chr13:40229983 synonymous SNV . 0 23 hm5C_associated_SNPs_115280 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr13:40229959-40229986
64251 chr19 804119 804119 1 + C T COAD 804118 + 804098 804138 41 GTGATCCACATCCGGAAGCTCCCCATCGACGTCACGGAGGG GTGATCCACATCCGGAAGCTCTCCATCGACGTCACGGAGGG < 41bp 0.602887260853856 0.83269842570203 0.026122719 0.9628184 prediction 0.459622329696348 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:804118 chr19:804119 nonsynonymous SNV 0.150 4 22 hm5C_associated_SNPs_115282 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:804115-804133
64251 chr8 64098782 64098782 1 + T C UCEC 64098780 + 64098760 64098800 41 CCATTGGATTTCCATATTCTCTTGGGGAAGCAGCGTGGTCC CCATTGGATTTCCATATTCTCTCGGGGAAGCAGCGTGGTCC < 41bp 0.577393093074327 0.807201387590483 0.20965019 0.14157596 prediction 0.459616589032312 Functional Gain - YTHDF3 ENSG00000185728 CDS Human protein_coding chr8:64098780 chr8:64098782 synonymous SNV . 0 23 hm5C_associated_SNPs_115284 0 0 9 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr8:64098766-64098785
64251 chr11 119020882 119020882 1 + C T SKCM 119020881 + 119020861 119020901 41 GTTCGTGGAGCTGTCCTATTCCGTGCGGGAGGGGCCCTGCT GTTCGTGGAGCTGTCCTATTCTGTGCGGGAGGGGCCCTGCT < 41bp 0.488698301625901 0.729804907593556 0.18193167 0.18938205 prediction 0.459609815187113 Functional Gain - ABCG4 ENSG00000172350 CDS Human protein_coding chr11:119020881 chr11:119020882 synonymous SNV . 0 22 hm5C_associated_SNPs_115288 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:119020877-119020907
64251 chr7 90895133 90895133 1 + C T OV 90895132 + 90895112 90895152 41 ATGGGCTCATGTACTTCGGGCCCGAGGAGCTGCGCTTCTCG ATGGGCTCATGTACTTCGGGCTCGAGGAGCTGCGCTTCTCG < 41bp 0.515956025889718 0.745759676914591 0.2503882 0.35578728 prediction 0.459607302049746 Functional Gain - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895132 chr7:90895133 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_115289 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:90895120-90895140
64251 chr5 141318258 141318258 1 + C T LUAD 141318257 + 141318237 141318277 41 CGGAGCCAGCCTGGAAGCCTCCAGCAGGGCTATTCCCCCAC CGGAGCCAGCCTGGAAGCCTCTAGCAGGGCTATTCCCCCAC < 41bp 0.523530514535471 0.753328997531371 0.24403346 0.07430577 prediction 0.459596965991801 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141318257 chr5:141318258 synonymous SNV . 0 22 hm5C_associated_SNPs_115290 0 0 2 PPIG POSTAR2 ENCODE chr5:141318207-141318283
64251 chr22 30163526 30163526 1 + A G rs76013375 30163523 + 30163503 30163543 41 GCGCGGACGCTATCTACGACCACATCAACGAGGGGGTGAGG GCGCGGACGCTATCTACGACCACGTCAACGAGGGGGTGAGG < 41bp 0.496257452518873 0.729797688161843 0.06681141 0.13224903 prediction 0.459595376323685 Functional Gain - UQCR10 ENSG00000184076 CDS Human protein_coding chr22:30163523 chr22:30163526 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_115291 0 0 19 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr22:30163496-30163528
64251 chr16 71957234 71957234 1 + C T SKCM 71957233 + 71957213 71957253 41 TGGGGACTTATCAGGCCTTTCCCAATATTCATCCACCTCAG TGGGGACTTATCAGGCCTTTCTCAATATTCATCCACCTCAG < 41bp 0.592226116200372 0.822018116897227 0.30568755 0.89529455 prediction 0.45958400139371 Functional Gain - IST1 ENSG00000182149 CDS Human protein_coding chr16:71957233 chr16:71957234 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_115294 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:71957189-71957238
64251 chr11 2415336 2415336 1 + C G LUSC 2415335 + 2415315 2415355 41 TCCCCGCAAGGCATCTACATCCTCATCGCTGTGGGCGCTGT TCCCCGCAAGGCATCTACATCGTCATCGCTGTGGGCGCTGT < 41bp 0.409567900101136 0.729786327724004 0.0693582 0.1981282 prediction 0.459572655448008 Functional Gain - CD81 ENSG00000110651 CDS Human protein_coding chr11:2415335 chr11:2415336 nonsynonymous SNV 0.974 4 22 hm5C_associated_SNPs_115296 0 0 15 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:2415320-2415340
64251 chr16 57153179 57153179 1 + C T SKCM 57153178 + 57153158 57153198 41 GATGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGGGTAC GATGGCAAGTGGATGCTGGTCTACAGGACTGAGGTGGGTAC < 41bp 0.582031387155145 0.81181739028774 0.45064843 0.8593807 prediction 0.45957200626519 Functional Gain - CPNE2 ENSG00000140848 CDS Human protein_coding chr16:57153178 chr16:57153179 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_115298 0 0 1 PPIG POSTAR2 ENCODE chr16:57153132-57153192
64251 chr20 19955331 19955331 1 + C A rs371812021 19955327 + 19955307 19955347 41 GCTCCCCAGCTGACAGCAAACCCCCGAACCTTCCACCTCCC GCTCCCCAGCTGACAGCAAACCCCAGAACCTTCCACCTCCC < 41bp 0.297206833943573 0.729784946607188 0.21020484 0.095519364 prediction 0.459569893214377 Functional Gain - RIN2 ENSG00000132669 CDS Human protein_coding chr20:19955327 chr20:19955331 nonsynonymous SNV 0.937 1 25 hm5C_associated_SNPs_115299 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:19955331-19955332
64251 chr1 150297544 150297544 1 + C T COAD 150297543 + 150297523 150297563 41 CATGGACAAGAAGAAGGCAGCCGGTATGTACCTTTCTGCAT CATGGACAAGAAGAAGGCAGCTGGTATGTACCTTTCTGCAT < 41bp 0.502770088080303 0.732554591146522 0.14844552 0.1798034 prediction 0.459569006132438 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150297543 chr1:150297544 synonymous SNV . 0 22 hm5C_associated_SNPs_115300 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:150297495-150297545
64251 chr15 59406674 59406674 1 + T C rs16941036 59406672 + 59406652 59406692 41 CCCACACCTGAGGATGTCTCCATGAAGGAAGAGAATCTCTG CCCACACCTGAGGATGTCTCCACGAAGGAAGAGAATCTCTG < 41bp 0.623470783723685 0.853241943555763 0.13895732 0.3251223 prediction 0.459542319664156 Functional Gain - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59406672 chr15:59406674 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_115306 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917666 chr15:59406644-59406675
64251 chr14 99969167 99969167 1 + C T UCEC 99969166 + 99969146 99969186 41 TTCAGCCTACACCACAAGTGCCGCAAGTACAGCAGTCACAG TTCAGCCTACACCACAAGTGCTGCAAGTACAGCAGTCACAG < 41bp 0.592778534489886 0.822534942920198 0.07326773 0.107937634 prediction 0.459512816860625 Functional Gain - CCNK ENSG00000090061 CDS Human protein_coding chr14:99969166 chr14:99969167 nonsynonymous SNV 0.946 2 22 hm5C_associated_SNPs_115309 0 0 8 IGF2BP1 POSTAR2 ENCODE chr14:99969136-99969201
64251 chr16 25123281 25123281 1 + T C STAD 25123279 + 25123259 25123299 41 TGCGACGCAGACGACGAGGGCGTGCGCGGCACCTGCGAAGA TGCGACGCAGACGACGAGGGCGCGCGCGGCACCTGCGAAGA < 41bp 0.533526177300744 0.763278033056278 0.38218743 0.45882675 prediction 0.459503711511069 Functional Gain - LCMT1 ENSG00000205629 CDS Human protein_coding chr16:25123279 chr16:25123281 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_115310 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr16:25123281-25123282
64251 chr10 104678301 104678301 1 + C G GBM 104678297 + 104678277 104678317 41 GCGGGCGGGCAGGCAGCCGCCGCACTGCCCACTTGGAAGAT GCGGGCGGGCAGGCAGCCGCCGCAGTGCCCACTTGGAAGAT < 41bp 0.608808934129181 0.838548336629035 0.10485998 0.3534864 prediction 0.459478804999708 Functional Gain - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104678297 chr10:104678301 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_115317 0 0 1 EIF3H POSTAR2 ENCODE chr10:104678275-104678311
64251 chr19 47259274 47259274 1 + C T rs201454433 47259273 + 47259253 47259293 41 TGGCGCAGCCCCCGCCGCGCCCCGCTGCGACGCCCTGGACG TGGCGCAGCCCCCGCCGCGCCTCGCTGCGACGCCCTGGACG < 41bp 0.511845048728238 0.741575167639569 0.069071114 0.28952748 prediction 0.459460237822663 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259273 chr19:47259274 synonymous SNV . 0 22 hm5C_associated_SNPs_115321 2 0 1 DDX3X POSTAR2 ENCODE chr19:47259265-47259281
64251 chr16 89789898 89789898 1 + T C rs6500437 89789896 + 89789876 89789916 41 TGCGCTGGCAGTCAAGTGGCCATGGGACAAAGAGACGGCGC TGCGCTGGCAGTCAAGTGGCCACGGGACAAAGAGACGGCGC < 41bp 0.547851692097241 0.777574796877352 0.29394397 0.57912993 prediction 0.459446209560223 Functional Gain - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89789896 chr16:89789898 nonsynonymous SNV 0.704 0 23 hm5C_associated_SNPs_115323 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:89789864-89789903
64251 chr10 5951203 5951203 1 + C T UCEC 5951202 + 5951182 5951222 41 GAGGGACCACCCCCTCCTCCCCGAGGCTGAGGCGTGTGTGC GAGGGACCACCCCCTCCTCCCTGAGGCTGAGGCGTGTGTGC < 41bp 0.530940311608087 0.76066206966712 0.5517242 0.14719808 prediction 0.459443516118066 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5951202 chr10:5951203 synonymous SNV . 0 22 hm5C_associated_SNPs_115324 0 0 8 FMR1 POSTAR2 GSE39682,GSM977616 chr10:5951164-5951204
64251 chr4 57333902 57333902 1 + T G COAD 57333900 + 57333880 57333920 41 TTCACGCGCGCTCTCAAGACCGTCAATAAGAGTAAGTGTCG TTCACGCGCGCTCTCAAGACCGGCAATAAGAGTAAGTGTCG < 41bp 0.66205455757941 0.891772419646483 0.028673947 0.20047203 prediction 0.459435724134145 Functional Gain - SRP72 ENSG00000174780 CDS Human protein_coding chr4:57333900 chr4:57333902 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_115327 0 0 3 DDX3X POSTAR2 ENCODE chr4:57333770-57333910
64251 chr6 26598831 26598831 1 + C A THCA 26598830 + 26598810 26598850 41 GATCTTTGGAGCCCCGCCACCCTCAGAGAGCATGGAGGGAC GATCTTTGGAGCCCCGCCACCATCAGAGAGCATGGAGGGAC < 41bp 0.480921635122836 0.729714643325439 0.09744105 0.2965412 prediction 0.459429286650877 Functional Gain - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598830 chr6:26598831 synonymous SNV . 0 22 hm5C_associated_SNPs_115328 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26598680-26598900
64251 chr19 12061414 12061414 1 + C G rs372282172 12061410 + 12061390 12061430 41 TTCAACGGCATGGAAGGGTTCACACTTGGGAGAAACTCTAT TTCAACGGCATGGAAGGGTTCACAGTTGGGAGAAACTCTAT < 41bp 0.464878130940645 0.729696808290056 0.027860105 0.056999236 prediction 0.459393616580111 Functional Gain - ZNF700 ENSG00000267274 ncRNA_intronic Human sense_overlapping chr19:12061410 chr19:12061414 . . 0 25 hm5C_associated_SNPs_115334 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr19:12061385-12061428
64251 chr15 39874870 39874870 1 + C T SKCM 39874869 + 39874849 39874889 41 GAGAATGCTGAGTTGGACGTCCCCATCCAAAGCGTCTTCAC GAGAATGCTGAGTTGGACGTCTCCATCCAAAGCGTCTTCAC < 41bp 0.452283839676969 0.729680344944155 0.07104835 0.9482032 prediction 0.45936068988831 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874869 chr15:39874870 nonsynonymous SNV 0.982 1 22 hm5C_associated_SNPs_115341 0 0 1 SND1 POSTAR2 ENCODE chr15:39874861-39874875
64251 chr14 94640813 94640813 1 + C G rs114546840 94640809 + 94640789 94640829 41 GTGCCCGGCGGTCCATGCATCCGCCGCCGCCCGCCGCCGCG GTGCCCGGCGGTCCATGCATCCGCGGCCGCCCGCCGCCGCG < 41bp 0.616962377191717 0.846632626067143 0.22107494 0.8413937 prediction 0.459340497750853 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94640809 chr14:94640813 nonsynonymous SNV 0.611 0 25 hm5C_associated_SNPs_115344 0 0 1 DDX3X POSTAR2 ENCODE chr14:94640711-94640833
64251 chr7 148951168 148951168 1 + C A UCEC 148951167 + 148951147 148951187 41 AGCTTCAGCTGCAAGGTGAGCCTGGTGACCCATCAGCGTTG AGCTTCAGCTGCAAGGTGAGCATGGTGACCCATCAGCGTTG < 41bp 0.464664270192277 0.729666367285364 0.8084938 0.8868265 prediction 0.459332734570728 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148951167 chr7:148951168 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115348 0 0 2 RBM15 POSTAR2 ENCODE chr7:148951129-148951174
64251 chr9 124094767 124094767 1 + C A COAD 124094766 + 124094746 124094786 41 GGATCGGCGGACGCCCATCACCGTGGTGAAGCAAGGCTTTG GGATCGGCGGACGCCCATCACAGTGGTGAAGCAAGGCTTTG < 41bp 0.520358118352347 0.7500199948373 0.88463366 0.90669835 prediction 0.459323752969907 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124094766 chr9:124094767 synonymous SNV . 0 22 hm5C_associated_SNPs_115349 0 0 3 RPS3 POSTAR2 ENCODE chr9:124094711-124094770
64251 chr12 85677587 85677587 1 + A G UCEC 85677584 + 85677564 85677604 41 GGAGAAAGTCTTTCAGAAAACTCATTACCCGGATGTGTATG GGAGAAAGTCTTTCAGAAAACTCGTTACCCGGATGTGTATG < 41bp 0.517940132973271 0.747593296474914 0.21450135 0.18444881 prediction 0.459306327003286 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85677584 chr12:85677587 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_115352 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:85677577-85677648
64251 chr1 52879650 52879650 1 + C T UCEC 52879649 + 52879629 52879669 41 CGCTACAGGAGGAGTAGGAGCCGGTCTCCCAGAAGGTAAAG CGCTACAGGAGGAGTAGGAGCTGGTCTCCCAGAAGGTAAAG < 41bp 0.492802141695863 0.72963156306228 0.49015534 0.32328153 prediction 0.45926312612456 Functional Gain - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52879649 chr1:52879650 nonsynonymous SNV 0.141 4 22 hm5C_associated_SNPs_115365 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:52879634-52879657
64251 chr18 9815160 9815160 1 + T C COAD 9815158 + 9815138 9815178 41 GGGTCAAGGAGCTGAAAGAACATGGTCCAGAAAACATTGTA GGGTCAAGGAGCTGAAAGAACACGGTCCAGAAAACATTGTA < 41bp 0.452457454397333 0.7296295975572 0.0853793 0.10176325 prediction 0.4592591951144 Functional Gain - RAB31 ENSG00000168461 CDS Human protein_coding chr18:9815158 chr18:9815160 synonymous SNV . 0 23 hm5C_associated_SNPs_115366 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:9815129-9815188
64251 chr6 116600496 116600496 1 - G C rs199933032 116600500 - 116600480 116600520 41 AAAGTGCGCCACCGTCTCAGCAGCCGTGGCTGAGAGGGAGA AAAGTGCGCCACCGTCTCAGCAGCGGTGGCTGAGAGGGAGA < 41bp 0.620542371674757 0.85016552399908 0.12479487 0.15144256 prediction 0.459246304648647 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600500 chr6:116600496 synonymous SNV . 0 25 hm5C_associated_SNPs_115370 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr6:116600475-116600497
64251 chr7 6630082 6630082 1 + C A CESC 6630081 + 6630061 6630101 41 GGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGC GGAGTTCGTGTTCCAGGTGCCAAAGGAGCGCAGCGCGCAGC < 41bp 0.471789068480882 0.729616416038491 0.44262826 0.89414144 prediction 0.459232832076981 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6630081 chr7:6630082 synonymous SNV . 0 22 hm5C_associated_SNPs_115372 0 0 3 DDX3X POSTAR2 ENCODE chr7:6630068-6630100
64251 chr19 39868390 39868390 1 + A G UCEC 39868387 + 39868367 39868407 41 TCCACCAGCTCCAGCTCCCACTGATGGCAGTGAGCCTGCCC TCCACCAGCTCCAGCTCCCACTGGTGGCAGTGAGCCTGCCC < 41bp 0.540326462984301 0.769936810603399 0.26657307 0.37844226 prediction 0.459220695238197 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39868387 chr19:39868390 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_115375 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:39868355-39868404
64251 chr12 7303566 7303566 1 + C G LUSC 7303562 + 7303542 7303582 41 ATGAACCGGGTTGCCCACCCCAGCCACGTGCTCAGCTCCCA ATGAACCGGGTTGCCCACCCCAGCGACGTGCTCAGCTCCCA < 41bp 0.432052964496164 0.729603507349779 0.21146432 0.75921094 prediction 0.459207014699559 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7303562 chr12:7303566 nonsynonymous SNV 0.988 3 25 hm5C_associated_SNPs_115377 0 0 1 SND1 POSTAR2 ENCODE chr12:7303535-7303588
64251 chr7 97823316 97823316 1 + C T UCEC 97823315 + 97823295 97823335 41 ACCTGGAATTAAGAGCCACGCCGGAGCCAGCACAGACTGGT ACCTGGAATTAAGAGCCACGCTGGAGCCAGCACAGACTGGT < 41bp 0.503263283479812 0.73285587341467 0.7708678 0.5523523 prediction 0.459185179869717 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97823315 chr7:97823316 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_115380 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:97823300-97823320
64251 chr19 37880681 37880681 1 + C A UCEC 37880677 + 37880657 37880697 41 TAAGACTACACCAGAGAATTCACGCTGGAGAAAAACCTTAT TAAGACTACACCAGAGAATTCACGATGGAGAAAAACCTTAT < 41bp 0.323123247456938 0.729585651915042 0.117829174 0.26647744 prediction 0.459171303830084 Functional Gain - ZNF527 ENSG00000189164 CDS Human protein_coding chr19:37880677 chr19:37880681 nonsynonymous SNV 0.165 0 25 hm5C_associated_SNPs_115382 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:37880664-37880691
64251 chr4 88903719 88903719 1 + C T SKCM 88903718 + 88903698 88903738 41 AATGGTGCATACAAGGCCATCCCCGTTGCCCAGGACCTGAA AATGGTGCATACAAGGCCATCTCCGTTGCCCAGGACCTGAA < 41bp 0.577441636076424 0.807010427570182 0.15220258 0.55255735 prediction 0.459137582987517 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88903718 chr4:88903719 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_115391 0 0 3 RPS3 POSTAR2 ENCODE chr4:88903701-88903749
64251 chr19 47774680 47774680 1 + C G rs117519030 47774679 + 47774659 47774699 41 AGGTGATGAGGAGGAACCAGCCCAAGACCACCAAGCCCCAG AGGTGATGAGGAGGAACCAGCGCAAGACCACCAAGCCCCAG < 41bp 0.64467444156545 0.874240738234821 0.34604812 0.51470286 prediction 0.459132593338742 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774679 chr19:47774680 synonymous SNV . 0 22 hm5C_associated_SNPs_115392 0 0 9 DDX6 POSTAR2 ENCODE chr19:47774600-47774696
64251 chr20 18295778 18295778 1 + C T SKCM 18295777 + 18295757 18295797 41 GGTTTCTCCAGTCAGAAATTCCCCATGCAGCATGTGCTGTG GGTTTCTCCAGTCAGAAATTCTCCATGCAGCATGTGCTGTG < 41bp 0.554908643715904 0.784473860697108 0.10888213 0.9702295 prediction 0.459130433962407 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18295777 chr20:18295778 nonsynonymous SNV 0.233 0 22 hm5C_associated_SNPs_115393 0 0 2 GRWD1 POSTAR2 ENCODE chr20:18295708-18295816
64251 chr12 100612275 100612275 1 + C T LUSC 100612274 + 100612254 100612294 41 CCAATGAGAGATTTGCTGTTCCGGAAATACTCTTTAATCCT CCAATGAGAGATTTGCTGTTCTGGAAATACTCTTTAATCCT < 41bp 0.545125096263309 0.774689471039945 0.09802553 0.053810924 prediction 0.459128749553271 Functional Gain - ACTR6 ENSG00000075089 CDS Human protein_coding chr12:100612274 chr12:100612275 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_115395 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:100612253-100612293
64251 chr16 2815556 2815556 1 + C A KIRC 2815555 + 2815535 2815575 41 GCAGAGGTTCCAGGTCATCACCAGAGCCCAAGACCAAGTCT GCAGAGGTTCCAGGTCATCACAAGAGCCCAAGACCAAGTCT < 41bp 0.569628928300354 0.799183381029601 0.7653365 0.6615123 prediction 0.459108905458494 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815555 chr16:2815556 nonsynonymous SNV 0.977 0 22 hm5C_associated_SNPs_115398 0 0 22 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2815480-2815580
64251 chr3 100068081 100068081 1 + C A rs146851779 100068080 + 100068060 100068100 41 AGATCGTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAA AGATCGTCCTGCCTCAGCCTCATGAGTAGCTGGGACTACAA < 41bp 0.562027774091348 0.791578731399287 0.35125557 0.49543566 prediction 0.45910191461588 Functional Gain - NIT2 ENSG00000114021 intronic Human protein_coding chr3:100068080 chr3:100068081 . . 0 22 hm5C_associated_SNPs_115399 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:100068043-100068081
64251 chr19 14037946 14037946 1 + T G rs376657894 14037943 + 14037923 14037963 41 GCTCCAGGGGAGGGGAGCTCCTCTGAACCAACCATCCTGTC GCTCCAGGGGAGGGGAGCTCCTCGGAACCAACCATCCTGTC < 41bp 0.361098780031697 0.729547715595012 0.23534954 0.57161456 prediction 0.459095431190023 Functional Gain - CC2D1A ENSG00000132024 intronic Human protein_coding chr19:14037943 chr19:14037946 . . 0 24 hm5C_associated_SNPs_115403 0 0 5 CDC40 POSTAR2 ENCODE chr19:14037910-14037964
64251 chr1 150463976 150463976 1 + C T SKCM 150463975 + 150463955 150463995 41 GCTTCACGGGATCAGCTTCGCCAGTTGTTCAAGGTGGGGTG GCTTCACGGGATCAGCTTCGCTAGTTGTTCAAGGTGGGGTG < 41bp 0.495572638500053 0.729542411313008 0.16753042 0.18380147 prediction 0.459084822626015 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150463975 chr1:150463976 stopgain 0.966 0 22 hm5C_associated_SNPs_115406 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:150463955-150463978
64251 chr3 183888427 183888427 1 + C T SKCM 183888426 + 183888406 183888446 41 CCGCCCGCGGCCATGGGGCCCCCAGGAGCCCCTCCGGGCCG CCGCCCGCGGCCATGGGGCCCTCAGGAGCCCCTCCGGGCCG < 41bp 0.534350193173737 0.763890395574853 0.5459743 0.4058954 prediction 0.459080404802233 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183888426 chr3:183888427 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_115407 0 0 1 METAP2 POSTAR2 ENCODE chr3:183888375-183888431
64251 chr9 112899629 112899629 1 + C T UCEC 112899628 + 112899608 112899648 41 CAGACAAGCCACTGACTAATCCGAGACCACCTTCTGTCGGG CAGACAAGCCACTGACTAATCTGAGACCACCTTCTGTCGGG < 41bp 0.501988070358608 0.731518919318704 0.5846956 0.3629164 prediction 0.459061697920192 Functional Gain - AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 CDS Human other chr9:112899628 chr9:112899629 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_115409 0 0 1 TARBP2 POSTAR2 GSE49648,GSM1204357 chr9:112899620-112899640
64251 chr19 36257685 36257685 1 + C T COAD 36257684 + 36257664 36257704 41 TACAGCATCCCCGGCACCAGCCCAGGCCCAGACCCCCACCC TACAGCATCCCCGGCACCAGCTCAGGCCCAGACCCCCACCC < 41bp 0.548219551191091 0.777744315886793 0.25539467 0.24802989 prediction 0.459049529391403 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36257684 chr19:36257685 synonymous SNV . 0 22 hm5C_associated_SNPs_115413 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221663 chr19:36257680-36257700
64251 chr4 113568387 113568387 1 + C T UCEC 113568386 + 113568366 113568406 41 AAGAAAAAGAAGAAGAAAGGCCGAATGAAAAAGGAAGACAA AAGAAAAAGAAGAAGAAAGGCTGAATGAAAAAGGAAGACAA < 41bp 0.534053397765649 0.763566527895851 0.70533967 0.6779802 prediction 0.459026260260404 Functional Gain - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113568386 chr4:113568387 stopgain 0.962 1 22 hm5C_associated_SNPs_115417 0 0 11 FBL POSTAR2 GSE43666,GSM1067864 chr4:113568380-113568400
64251 chr19 33794135 33794135 1 + C A rs34665205 33794134 + 33794114 33794154 41 CGGCCCGGGAGCCTGGAGGACCTGGCCGGTCGATCCGCCCG CGGCCCGGGAGCCTGGAGGACATGGCCGGTCGATCCGCCCG < 41bp 0.553689761362769 0.783200188928664 0.525064 0.4837064 prediction 0.45902085513179 Functional Gain - CEBPA-AS1 ENSG00000178863;ENSG00000267296 ncRNA_exonic Human other chr19:33794134 chr19:33794135 . . 0 22 hm5C_associated_SNPs_115418 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:33794135-33794136
64251 chr7 150769158 150769158 1 + C A KIRP 150769154 + 150769134 150769174 41 GTCCGCTTCGTCTCCCGCTTCACCCAGGAGATCTTCGCCTT GTCCGCTTCGTCTCCCGCTTCACCAAGGAGATCTTCGCCTT < 41bp 0.290839156350242 0.729504992352194 0.016013116 0.11888477 prediction 0.459009984704387 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150769154 chr7:150769158 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_115422 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:150769143-150769177
64251 chr15 76632802 76632802 1 + C A PRAD 76632798 + 76632778 76632818 41 GTGGAGATGACCGGCCTGAGCCCGCGGGTCATCCGCGTCTG GTGGAGATGACCGGCCTGAGCCCGAGGGTCATCCGCGTCTG < 41bp 0.702639159003394 0.932140760457655 0.4993947 0.5140094 prediction 0.459003202908523 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76632798 chr15:76632802 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_115424 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:76632800-76632820
64251 chr2 71299832 71299832 1 + C T LUAD 71299831 + 71299811 71299851 41 GCTCATCAACCCTGATGGCTCCGAGAGTGGCTGCGGCGGCT GCTCATCAACCCTGATGGCTCTGAGAGTGGCTGCGGCGGCT < 41bp 0.553875814916692 0.783368302976472 0.3004552 0.16657466 prediction 0.45898497611956 Functional Gain - NAGK ENSG00000124357 CDS Human protein_coding chr2:71299831 chr2:71299832 synonymous SNV . 0 22 hm5C_associated_SNPs_115429 0 0 2 BUD13 POSTAR2 ENCODE chr2:71299720-71299965
64251 chr16 2758609 2758609 1 + C G rs537078340 2758605 + 2758585 2758625 41 CCAATGCTTCTGGAGACTTCCTGCCTAGGCCTCATCCTCCT CCAATGCTTCTGGAGACTTCCTGCGTAGGCCTCATCCTCCT < 41bp 0.5823848807406 0.811873256662122 0.0126656 0.020439684 prediction 0.458976751843045 Functional Gain - KCTD5 ENSG00000167977 UTR3 Human protein_coding chr16:2758605 chr16:2758609 . . 0 25 hm5C_associated_SNPs_115431 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2758583-2758617
64251 chr8 73480034 73480034 1 + C T SKCM 73480033 + 73480013 73480053 41 GGTCGACACTTTCCCTTCCTCCAGAGCCTGTGGACATTATC GGTCGACACTTTCCCTTCCTCTAGAGCCTGTGGACATTATC < 41bp 0.484189880524321 0.729471477371571 0.8224925 0.5055637 prediction 0.458942954743142 Functional Gain - KCNB2 ENSG00000182674 CDS Human protein_coding chr8:73480033 chr8:73480034 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_115433 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:73480009-73480039
64251 chr2 220099777 220099777 1 + C A UCEC 220099773 + 220099753 220099793 41 GTCATCCCAGGCAGTTGCTGCCCCCTTGGGCCCTTTGCTGG GTCATCCCAGGCAGTTGCTGCCCCATTGGGCCCTTTGCTGG < 41bp 0.347330295921034 0.729464371258038 0.029737175 0.014885932 prediction 0.458928742516076 Functional Gain - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220099773 chr2:220099777 synonymous SNV . 0 25 hm5C_associated_SNPs_115434 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:220099777-220099778
64251 chr16 21181780 21181780 1 + C T SKCM 21181779 + 21181759 21181799 41 TGGTGGCCTTTATGAAGTCTCCAGTGGGTCAGTACTTGGAC TGGTGGCCTTTATGAAGTCTCTAGTGGGTCAGTACTTGGAC < 41bp 0.527365657854481 0.756828606541754 0.10263392 0.26836628 prediction 0.458925897374545 Functional Gain - TMEM159 ENSG00000011638 CDS Human protein_coding chr16:21181779 chr16:21181780 nonsynonymous SNV 0.979 0 22 hm5C_associated_SNPs_115437 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:21181780-21181800
64251 chr10 72639396 72639396 1 + A G rs113438618 72639393 + 72639373 72639413 41 GTGCCCCTGTAGAGCGTCTCCCCAGAACCAGACCCCGAGCC GTGCCCCTGTAGAGCGTCTCCCCGGAACCAGACCCCGAGCC < 41bp 0.499476021610295 0.729458129641957 0.2035236 0.27037597 prediction 0.458916259283914 Functional Gain - SGPL1 ENSG00000166224 UTR3 Human protein_coding chr10:72639393 chr10:72639396 . . 0 24 hm5C_associated_SNPs_115439 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr10:72639016-72639432
64251 chr9 97823033 97823033 1 + A G COAD 97823030 + 97823010 97823050 41 ATCTCTTGGAGCAGAAGACTCTGAGCCCCCGAACTCTGCAA ATCTCTTGGAGCAGAAGACTCTGGGCCCCCGAACTCTGCAA < 41bp 0.510677073984141 0.74013088528726 0.9475294 0.9578942 prediction 0.458907622606239 Functional Gain - C9orf3 ENSG00000148120 CDS Human protein_coding chr9:97823030 chr9:97823033 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_115440 0 0 8 BUD13 POSTAR2 ENCODE chr9:97822938-97823062
64251 chr2 47601056 47601056 1 + C G LUAD 47601052 + 47601032 47601072 41 CAATGATGGGCTTTATGATCCTGACTGCGATGAGAGCGGGC CAATGATGGGCTTTATGATCCTGAGTGCGATGAGAGCGGGC < 41bp 0.449996503391103 0.729444336437271 0.41349107 0.71254474 prediction 0.458888672874542 Functional Gain - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47601052 chr2:47601056 nonsynonymous SNV 0.111 0 25 hm5C_associated_SNPs_115445 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:47601040-47601060
64251 chr14 70346477 70346477 1 + C T STAD 70346476 + 70346456 70346496 41 CTGTCCCCTGCTCGCGGCCACCGCACCACAGGCCCCAGGGT CTGTCCCCTGCTCGCGGCCACTGCACCACAGGCCCCAGGGT < 41bp 0.504696286804951 0.73414058038822 0.25470343 0.33056313 prediction 0.458888587166537 Functional Gain - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70346476 chr14:70346477 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_115446 0 0 2 RPS3 POSTAR2 ENCODE chr14:70346422-70346488
64251 chr4 60044 60044 1 + C T READ 60043 + 60023 60063 41 ATGAGACAGCAGCCAAACCCCCAGGTAGGTGAGACTGAATG ATGAGACAGCAGCCAAACCCCTAGGTAGGTGAGACTGAATG < 41bp 0.49473545743397 0.729428067027952 0.12150085 0.12744471 prediction 0.458856134055905 Functional Gain - ZNF595;ZNF718 ENSG00000197701 CDS Human other chr4:60043 chr4:60044 nonsynonymous SNV 0.289 3 22 hm5C_associated_SNPs_115453 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:60022-60060
64251 chr4 89607914 89607914 1 + C A rs61738481 89607913 + 89607893 89607933 41 CCAAGAGCTTTTAGATTACCCCGGGGAGGATGTGGAGGAGA CCAAGAGCTTTTAGATTACCCAGGGGAGGATGTGGAGGAGA < 41bp 0.460742777977965 0.729422380988674 0.82475173 0.9202419 prediction 0.458844761977349 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89607913 chr4:89607914 synonymous SNV . 0 22 hm5C_associated_SNPs_115456 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:89607903-89607953
64251 chr3 49569126 49569126 1 + C A CESC 49569122 + 49569102 49569142 41 GCCTACTCGGGTGTCAGAAGCTGGCACCACAGTTCCTGGCC GCCTACTCGGGTGTCAGAAGCTGGAACCACAGTTCCTGGCC < 41bp 0.698273049422565 0.927694865171162 0.7322161 0.84549105 prediction 0.458843631497194 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569122 chr3:49569126 synonymous SNV . 0 25 hm5C_associated_SNPs_115458 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:49569118-49569144
64251 chr3 66430729 66430729 1 - G A rs145550978 66430730 - 66430710 66430750 41 GCCACTGACAGGACAGCTCCCCGGGAAACAGAGGGTGCCAC GCCACTGACAGGACAGCTCCCTGGGAAACAGAGGGTGCCAC < 41bp 0.520503865552022 0.74992560218568 0.9336958 0.7985422 prediction 0.458843473267317 Functional Gain - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430730 chr3:66430729 synonymous SNV . 0 22 hm5C_associated_SNPs_115459 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:66430713-66430743
64251 chr19 18304774 18304774 1 + A G LUSC 18304771 + 18304751 18304791 41 GCGTCTGGCCTCCGAGGCTTCCCAAATGTCCTCAAGAAGGT GCGTCTGGCCTCCGAGGCTTCCCGAATGTCCTCAAGAAGGT < 41bp 0.533327030406082 0.762736184444346 0.033543974 0.0505732 prediction 0.458818308076529 Functional Gain - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18304771 chr19:18304774 synonymous SNV . 0 24 hm5C_associated_SNPs_115464 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:18304722-18304777
64251 chr2 99226021 99226021 1 + C G rs3203856 99226020 + 99226000 99226040 41 AGGGTGGGCTGTTGCCCTTGCCTGAGGTTGCAGTCTGCGGT AGGGTGGGCTGTTGCCCTTGCGTGAGGTTGCAGTCTGCGGT < 41bp 0.53185398686504 0.761255462209762 0.71162546 0.85332835 prediction 0.458802950689443 Functional Gain - UNC50 ENSG00000115446 UTR5 Human protein_coding chr2:99226020 chr2:99226021 . . 0 22 hm5C_associated_SNPs_115465 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:99225999-99226023
64251 chr19 5654186 5654186 1 + A G HNSC 5654183 + 5654163 5654203 41 GATGATCAGAAACCTGGCCCCTCAGAGCGATCTCGAGCCAC GATGATCAGAAACCTGGCCCCTCGGAGCGATCTCGAGCCAC < 41bp 0.546493870212824 0.775863665011023 0.65825415 0.8313745 prediction 0.458739589596397 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5654183 chr19:5654186 synonymous SNV . 0 24 hm5C_associated_SNPs_115472 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:5654077-5654194
64251 chr17 79687871 79687871 1 + T G rs562742020 79687869 + 79687849 79687889 41 TGGGCCCCCCCGCTTGGCTCCCTGGGGGAATGGCCCAGGCG TGGGCCCCCCCGCTTGGCTCCCGGGGGGAATGGCCCAGGCG < 41bp 0.435739696157069 0.729366777272562 0.48964489 0.95811915 prediction 0.458733554545125 Functional Gain - SLC25A10 ENSG00000183048 UTR3 Human protein_coding chr17:79687869 chr17:79687871 . . 0 23 hm5C_associated_SNPs_115474 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:79687825-79687877
64251 chr17 73702489 73702489 1 + T G LUSC 73702487 + 73702467 73702507 41 ACGATAGCCCAGCCCACCATCCTCACCACCACAGCCACCCT ACGATAGCCCAGCCCACCATCCGCACCACCACAGCCACCCT < 41bp 0.387604020258944 0.729343336084636 0.028484017 0.07878134 prediction 0.458686672169271 Functional Gain - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73702487 chr17:73702489 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_115479 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73702484-73702520
64251 chr19 12902862 12902862 1 + C A STAD 12902861 + 12902841 12902881 41 GAGCTGGAACGCCTGATTGTCCCCAACAGCAACGGCGTGAT GAGCTGGAACGCCTGATTGTCACCAACAGCAACGGCGTGAT < 41bp 0.556864357582917 0.786205613256427 0.01892808 0.050430536 prediction 0.458682511347019 Functional Gain - JUNB ENSG00000171223 CDS Human protein_coding chr19:12902861 chr19:12902862 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_115480 0 0 1 RBM15 POSTAR2 ENCODE chr19:12902841-12902889
64251 chr16 31501699 31501699 1 - G C KIRC 31501703 - 31501683 31501723 41 GTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCTCATTCC GTAAGGGGCGGAGGACTGCCCACCGCACCTCTGCTCATTCC < 41bp 0.627745809863659 0.857079093918504 0.116324484 0.22098824 prediction 0.458666568109689 Functional Gain - SLC5A2 ENSG00000140675 CDS Human protein_coding chr16:31501703 chr16:31501699 nonsynonymous SNV 0.113 1 25 hm5C_associated_SNPs_115482 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:31501662-31501737
64251 chr7 73953017 73953017 1 + C T rs55634982 73953016 + 73952996 73953036 41 TTTCCTCCTTGCAGGAACCTCCGGGGAGCTGGGCGGGCTGA TTTCCTCCTTGCAGGAACCTCTGGGGAGCTGGGCGGGCTGA < 41bp 0.550745664067145 0.780071005124277 0.903306 0.64012843 prediction 0.458650682114263 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73953016 chr7:73953017 synonymous SNV . 0 22 hm5C_associated_SNPs_115489 0 0 3 PPIG POSTAR2 ENCODE chr7:73953009-73953038
64251 chr1 210415503 210415503 1 + A G UCEC 210415500 + 210415480 210415520 41 CCAACAGAGATGGTGGCCCCCTCAGCCACGAACCTGTGGGA CCAACAGAGATGGTGGCCCCCTCGGCCACGAACCTGTGGGA < 41bp 0.533991988145076 0.763313785805273 0.0957894 0.14143863 prediction 0.458643595320394 Functional Gain - SERTAD4 ENSG00000082497 CDS Human protein_coding chr1:210415500 chr1:210415503 nonsynonymous SNV 0.163 0 24 hm5C_associated_SNPs_115492 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:210415486-210415521
64251 chr1 32672662 32672662 1 + C T COAD 32672661 + 32672641 32672681 41 CTTCAAGAGCTTCAGTACCACCGCAGCCACTTGGCCATGGA CTTCAAGAGCTTCAGTACCACTGCAGCCACTTGGCCATGGA < 41bp 0.583894889351735 0.813207051437472 0.10039112 0.204094 prediction 0.458624324171475 Functional Gain - IQCC ENSG00000160051 CDS Human protein_coding chr1:32672661 chr1:32672662 nonsynonymous SNV 0.960 0 22 hm5C_associated_SNPs_115495 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:32672652-32672681
64251 chr16 29708353 29708353 1 + C G READ 29708349 + 29708329 29708369 41 GCCAGACAGGCGGCTGACTTCACTCTGAAGGTGGAAGTGGA GCCAGACAGGCGGCTGACTTCACTGTGAAGGTGGAAGTGGA < 41bp 0.446458971159192 0.729305482630153 0.4003298 0.786129 prediction 0.458610965260305 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29708349 chr16:29708353 nonsynonymous SNV 0.618 2 25 hm5C_associated_SNPs_115497 0 0 6 BUD13 POSTAR2 ENCODE chr16:29708353-29708396
64251 chr15 45879699 45879699 1 + C A UCEC 45879698 + 45879678 45879718 41 CTGACACGGCCACCCTACTGCCTGGAGGCCGGGGAGCCGAC CTGACACGGCCACCCTACTGCATGGAGGCCGGGGAGCCGAC < 41bp 0.539626145284514 0.768925527030743 0.2888657 0.81387687 prediction 0.458598763492457 Functional Gain - BLOC1S6 ENSG00000104164 CDS Human protein_coding chr15:45879698 chr15:45879699 nonsynonymous SNV 0.053 1 22 hm5C_associated_SNPs_115500 0 0 4 DDX3X POSTAR2 ENCODE chr15:45879651-45879723
64251 chr2 233388813 233388813 1 + T G rs2741299 233388811 + 233388791 233388831 41 ACGCGCAGGAGCTGCTCGGGCCTCGTCCGGGACTGCGGCGC ACGCGCAGGAGCTGCTCGGGCCGCGTCCGGGACTGCGGCGC < 41bp 0.379953354190949 0.72929633266239 0.41487318 0.68785954 prediction 0.458592665324781 Functional Gain - PRSS56 ENSG00000237412 CDS Human protein_coding chr2:233388811 chr2:233388813 synonymous SNV . 0 23 hm5C_associated_SNPs_115501 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr2:233388800-233388820
64251 chr13 73329425 73329425 1 + T G rs183901129 73329423 + 73329403 73329443 41 ATCGTTGTGCACAGGATCAACATGATGGTGACTGGGAAAAA ATCGTTGTGCACAGGATCAACAGGATGGTGACTGGGAAAAA < 41bp 0.640640872239529 0.869932155812836 0.053961813 0.25964677 prediction 0.458582567146615 Functional Gain - BORA ENSG00000136122 UTR3 Human protein_coding chr13:73329423 chr13:73329425 . . 0 23 hm5C_associated_SNPs_115504 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:73329412-73329450
64251 chr5 147653926 147653926 1 + T C UCEC 147653924 + 147653904 147653944 41 TAGCAGGAATTTTCAATAAACGTGACTTCACTAGGTGGCCT TAGCAGGAATTTTCAATAAACGCGACTTCACTAGGTGGCCT < 41bp 0.56307193467846 0.792344987410259 0.2150755 0.0993489 prediction 0.458546105463598 Functional Gain - SPINK13 ENSG00000214510 CDS Human protein_coding chr5:147653924 chr5:147653926 synonymous SNV . 0 23 hm5C_associated_SNPs_115506 0 0 1 U2AF2 POSTAR2 GSE61603,GSM1509288 chr5:147653920-147653980
64251 chr8 42977593 42977593 1 + C T SKCM 42977592 + 42977572 42977612 41 TGTGCGACTCCAACGACCTGCCGAAGACACTGTCCCAGTAT TGTGCGACTCCAACGACCTGCTGAAGACACTGTCCCAGTAT < 41bp 0.484190765078377 0.729262644395115 0.06581968 0.11713052 prediction 0.45852528879023 Functional Gain - POMK ENSG00000185900 CDS Human protein_coding chr8:42977592 chr8:42977593 nonsynonymous SNV 0.131 0 22 hm5C_associated_SNPs_115508 0 0 13 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:42977483-42977608
64251 chr1 210006589 210006589 1 + T C COAD 210006587 + 210006567 210006607 41 TGGGGAAGAGCCACCGGGCACATCACAAACATCCCCCGAAG TGGGGAAGAGCCACCGGGCACACCACAAACATCCCCCGAAG < 41bp 0.544063435215074 0.773318907267014 0.12372592 0.06906545 prediction 0.458510944103879 Functional Gain - DIEXF ENSG00000117597 CDS Human protein_coding chr1:210006587 chr1:210006589 nonsynonymous SNV 0.043 0 23 hm5C_associated_SNPs_115512 0 0 3 LARP4 POSTAR2 ENCODE chr1:210006546-210006629
64251 chr15 41862463 41862463 1 + C A COAD 41862462 + 41862442 41862482 41 GCCTTTGACAGTGTCATGGCCCGGGGAGAGCCAGCCGTTCA GCCTTTGACAGTGTCATGGCCAGGGGAGAGCCAGCCGTTCA < 41bp 0.596566274071492 0.825815283347614 0.8987555 0.9224695 prediction 0.458498018552242 Functional Gain - TYRO3 ENSG00000092445 CDS Human protein_coding chr15:41862462 chr15:41862463 synonymous SNV . 0 22 hm5C_associated_SNPs_115514 0 0 1 EFTUD2 POSTAR2 ENCODE chr15:41862413-41862465
64251 chr7 5645116 5645116 1 + T C rs116036920 5645114 + 5645094 5645134 41 TGGGAGTACTAGGGCCGGCCCGTCCTTCCCCGCCCCTGCCC TGGGAGTACTAGGGCCGGCCCGCCCTTCCCCGCCCCTGCCC < 41bp 0.496478605713365 0.729248835532594 0.540076 0.73923135 prediction 0.458497671065188 Functional Gain - FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645114 chr7:5645116 . . 0 23 hm5C_associated_SNPs_115515 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:5645070-5645148
64251 chr6 52541908 52541908 1 + T C HNSC 52541906 + 52541886 52541926 41 ATTGCAACCTTGCCAATGGACCTGATCGGTTTTGGTTATGC ATTGCAACCTTGCCAATGGACCCGATCGGTTTTGGTTATGC < 41bp 0.438778522131708 0.729248173212153 0.031048477 0.012445837 prediction 0.458496346424307 Functional Gain - TMEM14A ENSG00000096092 CDS Human protein_coding chr6:52541906 chr6:52541908 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_115516 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:52541893-52541908
64251 chr10 103920473 103920473 1 + T C rs200099530 103920470 + 103920450 103920490 41 CAAGGCGACTGCCAAAGCAGCTCTATCTCTGCCTGCCAAGC CAAGGCGACTGCCAAAGCAGCTCCATCTCTGCCTGCCAAGC < 41bp 0.501214024033562 0.73044736309482 0.7709485 0.8862462 prediction 0.458466678122516 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920470 chr10:103920473 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_115521 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:103920454-103920498
64251 chr1 155294665 155294665 1 + C T BLCA 155294664 + 155294644 155294684 41 TCGTGGTCCTTCGCCGGTGTCCCCGGAGCCCAGCGGCTGTG TCGTGGTCCTTCGCCGGTGTCTCCGGAGCCCAGCGGCTGTG < 41bp 0.485786971486244 0.729230345398971 0.2559334 0.5888558 prediction 0.458460690797943 Functional Gain - RUSC1 ENSG00000160753 CDS Human protein_coding chr1:155294664 chr1:155294665 nonsynonymous SNV 0.960 0 22 hm5C_associated_SNPs_115523 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:155294642-155294726
64251 chrX 136649852 136649852 1 + C A ESCA 136649848 + 136649828 136649868 41 GCCCTTCCCATGCCCCTTCCCGGGCTGCGGGAAGATCTTTG GCCCTTCCCATGCCCCTTCCCGGGATGCGGGAAGATCTTTG < 41bp 0.699845436928532 0.929072607599549 0.89676774 0.91053474 prediction 0.458454341342034 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649848 chrX:136649852 synonymous SNV . 0 25 hm5C_associated_SNPs_115524 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585673 chrX:136649828-136649854
64251 chr7 158696814 158696814 1 + C G rs842702 158696813 + 158696793 158696833 41 ATCACGGAGCCATGCTGACTCCGGGGTTTCAGATAACTGAC ATCACGGAGCCATGCTGACTCGGGGGTTTCAGATAACTGAC < 41bp 0.539465509954407 0.768688697001095 0.9123815 0.94847846 prediction 0.458446374093374 Functional Gain - WDR60 ENSG00000126870 intronic Human protein_coding chr7:158696813 chr7:158696814 . . 0 22 hm5C_associated_SNPs_115527 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr7:158696807-158696838
64251 chr19 48832635 48832635 1 + A G COAD 48832632 + 48832612 48832652 41 GGCTGAAGGCGGTGCAGGTCCTCATGGTGCTCTCCCTCATT GGCTGAAGGCGGTGCAGGTCCTCGTGGTGCTCTCCCTCATT < 41bp 0.56150961966925 0.790726302242678 0.19809979 0.27492923 prediction 0.458433365146857 Functional Gain - EMP3 ENSG00000142227 CDS Human protein_coding chr19:48832632 chr19:48832635 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_115530 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:48832620-48832640
64251 chr15 63353074 63353074 1 + C G BRCA 63353073 + 63353053 63353093 41 GTCTTCCTGCTGCAGGTGGCCCGTAAGCTGGTCATCATTGA GTCTTCCTGCTGCAGGTGGCCGGTAAGCTGGTCATCATTGA < 41bp 0.423309000339633 0.729204119793989 0.15236554 0.45748773 prediction 0.458408239587979 Functional Gain - TPM1 ENSG00000140416 CDS Human protein_coding chr15:63353073 chr15:63353074 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_115535 0 0 6 GRWD1 POSTAR2 ENCODE chr15:63353065-63353078
64251 chr19 17305440 17305440 1 + T A rs1064305 17305436 + 17305416 17305456 41 AGCCCTGGAAGCCGCAAGAGCAGGTGCTGAGGAGGGCGGAC AGCCCTGGAAGCCGCAAGAGCAGGAGCTGAGGAGGGCGGAC < 41bp 0.428036749323417 0.729202719337334 0.91036415 0.90582836 prediction 0.458405438674667 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17305436 chr19:17305440 synonymous SNV . 0 25 hm5C_associated_SNPs_115537 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:17305429-17305450
64251 chr8 126015654 126015654 1 + A G COAD 126015651 + 126015631 126015671 41 CCGGGTGGTTATCATGTTCTCAAAGACCTTGGTCTTGGAGG CCGGGTGGTTATCATGTTCTCAAGGACCTTGGTCTTGGAGG < 41bp 0.541177114153028 0.770368740823037 0.32173967 0.7809665 prediction 0.458383253340019 Functional Gain - SQLE ENSG00000104549 CDS Human protein_coding chr8:126015651 chr8:126015654 synonymous SNV . 0 24 hm5C_associated_SNPs_115540 0 0 7 PRPF8 POSTAR2 ENCODE chr8:126015652-126015702
64251 chr15 42133074 42133074 1 + C A LUSC 42133073 + 42133053 42133093 41 ACTCTGCGGGCTGGGGAGTTCCGGCGCGAGAGCTTCTCACT ACTCTGCGGGCTGGGGAGTTCAGGCGCGAGAGCTTCTCACT < 41bp 0.510078732426215 0.739262967240294 0.90877724 0.90682364 prediction 0.458368469628156 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42133073 chr15:42133074 synonymous SNV . 0 22 hm5C_associated_SNPs_115543 0 0 5 DDX24 POSTAR2 ENCODE chr15:42133025-42133086
64251 chrX 16859853 16859853 1 + C T LUSC 16859852 + 16859832 16859872 41 CGCTGTGCAAAAGCCCCCGTCCACAGGCTCTGCTCCGGCCA CGCTGTGCAAAAGCCCCCGTCTACAGGCTCTGCTCCGGCCA < 41bp 0.565139524552203 0.794323298808 0.28690583 0.83448696 prediction 0.458367548511595 Functional Gain - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16859852 chrX:16859853 synonymous SNV . 0 22 hm5C_associated_SNPs_115544 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:16859809-16859908
64251 chr22 38470346 38470346 1 + C T PAAD 38470345 + 38470325 38470365 41 GCCCCTTTACCGGGTGAGCACCGGCAACTATGAGTACCGCC GCCCCTTTACCGGGTGAGCACTGGCAACTATGAGTACCGCC < 41bp 0.511194022206966 0.740370147251255 0.81514215 0.3172943 prediction 0.458352250088578 Functional Gain - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38470345 chr22:38470346 synonymous SNV . 0 22 hm5C_associated_SNPs_115548 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:38470318-38470356
64251 chrX 129063425 129063425 1 + C G LUAD 129063424 + 129063404 129063444 41 TTTCCAAAAGCTGACTACTCCCAAGGTCGTCACCAAGCCAG TTTCCAAAAGCTGACTACTCCGAAGGTCGTCACCAAGCCAG < 41bp 0.411775001894059 0.729173678279425 0.33339196 0.86704564 prediction 0.458347356558849 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129063424 chrX:129063425 synonymous SNV . 0 22 hm5C_associated_SNPs_115549 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:129063416-129063467
64251 chr16 2511175 2511175 1 + C T SKCM 2511174 + 2511154 2511194 41 CCTCAGGGACCAGCAAATGGCCCCATCCGCTGCTCCTCAGG CCTCAGGGACCAGCAAATGGCTCCATCCGCTGCTCCTCAGG < 41bp 0.510916148836919 0.740087494940233 0.14694655 0.9453248 prediction 0.458342692206627 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2511174 chr16:2511175 synonymous SNV . 0 22 hm5C_associated_SNPs_115550 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:2511166-2511178
64251 chr7 112124979 112124979 1 + C G BRCA 112124978 + 112124958 112124998 41 CAAACTAAACCTCTGTCCAGCCGGATCGCAGCATCTGTTCC CAAACTAAACCTCTGTCCAGCGGGATCGCAGCATCTGTTCC < 41bp 0.641021320955943 0.870188787159539 0.16655335 0.8486306 prediction 0.458334932407192 Functional Gain - LSMEM1 ENSG00000181016 CDS Human protein_coding chr7:112124978 chr7:112124979 synonymous SNV . 0 22 hm5C_associated_SNPs_115552 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:112124958-112124984
64251 chr12 98995169 98995169 1 + C T HNSC 98995168 + 98995148 98995188 41 GTATGGAAGGGACTGTTTGCCCGTATCATCATGATTGGTAC GTATGGAAGGGACTGTTTGCCTGTATCATCATGATTGGTAC < 41bp 0.533883190542659 0.763049878960004 0.020942032 0.052545935 prediction 0.45833337683469 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98995168 chr12:98995169 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_115553 0 0 23 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:98995140-98995180
64251 chr6 142468512 142468512 1 + C A LIHC 142468508 + 142468488 142468528 41 AGGACGGCTCAGGAGCATGACAAGCGAGACCCTGTGGTGGC AGGACGGCTCAGGAGCATGACAAGAGAGACCCTGTGGTGGC < 41bp 0.693340269811766 0.922503361596145 0.060538262 0.19911993 prediction 0.458326183568758 Functional Gain - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142468508 chr6:142468512 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_115557 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:142468476-142468529
64251 chr5 916059 916059 1 + C T SKCM 916058 + 916038 916078 41 GGCCGGGTCCTGAGAAAACTCCCCTTTCTGGCTCATGCGCT GGCCGGGTCCTGAGAAAACTCTCCTTTCTGGCTCATGCGCT < 41bp 0.462368456309977 0.729154148371432 0.3349822 0.3675226 prediction 0.458308296742864 Functional Gain - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:916058 chr5:916059 nonsynonymous SNV 0.720 5 22 hm5C_associated_SNPs_115562 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:916016-916061
64251 chr19 10570295 10570295 1 + C T HNSC 10570294 + 10570274 10570314 41 CGGGACCTGCTGAAGAAATTCCGCATCCCTGTGGACACGAT CGGGACCTGCTGAAGAAATTCTGCATCCCTGTGGACACGAT < 41bp 0.453634756266276 0.729153120107242 0.38626665 0.45293272 prediction 0.458306240214483 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10570294 chr19:10570295 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_115564 0 0 2 BUD13 POSTAR2 ENCODE chr19:10570205-10570303
64251 chr9 6486894 6486894 1 + T G COAD 6486891 + 6486871 6486911 41 AAGTAATGATGGGGCTTATTCTCTTGTACTGGCTGGTGGAT AAGTAATGATGGGGCTTATTCTCGTGTACTGGCTGGTGGAT < 41bp 0.347599032695545 0.72914726991778 0.20229882 0.5561088 prediction 0.45829453983556 Functional Gain - UHRF2 ENSG00000147854 CDS Human protein_coding chr9:6486891 chr9:6486894 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_115567 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:6486878-6486905
64251 chr10 65359025 65359025 1 + T A ESCA 65359021 + 65359001 65359041 41 TTTAAACCTTGCAGCTACTGCTGCTGTTACTGCAGCAGTAA TTTAAACCTTGCAGCTACTGCTGCAGTTACTGCAGCAGTAA < 41bp 0.380848998369724 0.729141286228291 0.22910771 0.15803713 prediction 0.458282572456581 Functional Gain - REEP3 ENSG00000165476 CDS Human protein_coding chr10:65359021 chr10:65359025 synonymous SNV . 0 25 hm5C_associated_SNPs_115570 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr10:65359014-65359038
64251 chr10 51751483 51751483 1 + C T SKCM 51751482 + 51751462 51751502 41 CCAGAGGCAAGCACAATATTCCAGAGGAACTCTCAAACAGA CCAGAGGCAAGCACAATATTCTAGAGGAACTCTCAAACAGA < 41bp 0.576749243899033 0.805877999825296 0.8050758 0.28917348 prediction 0.458257511852525 Functional Gain - AGAP6 ENSG00000204149 CDS Human protein_coding chr10:51751482 chr10:51751483 stopgain 0.018 1 22 hm5C_associated_SNPs_115575 0 0 4 DDX24 POSTAR2 ENCODE chr10:51751482-51751505
64251 chr19 10818183 10818183 1 + C T KIRC 10818182 + 10818162 10818202 41 GGGCCCTGTTGCAGGTCAATCCGCTGGCTGGACCGGTGCAT GGGCCCTGTTGCAGGTCAATCTGCTGGCTGGACCGGTGCAT < 41bp 0.53956654523703 0.768691778577486 0.72543186 0.37213135 prediction 0.458250466680913 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10818182 chr19:10818183 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_115579 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:10818173-10818197
64251 chr3 38454487 38454487 1 + C A UCEC 38454486 + 38454466 38454506 41 CAGAGAATCTTGTCTCAGACCCGGGGGCCTCCGGAGTGAAC CAGAGAATCTTGTCTCAGACCAGGGGGCCTCCGGAGTGAAC < 41bp 0.574460448764281 0.803582875978429 0.9059862 0.8949355 prediction 0.458244854428296 Functional Gain - XYLB ENSG00000093217 CDS Human protein_coding chr3:38454486 chr3:38454487 synonymous SNV . 0 22 hm5C_associated_SNPs_115580 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:38454452-38454502
64251 chr2 96072701 96072701 1 + C T SKCM 96072700 + 96072680 96072720 41 TCTCTACAGAGCCCTGGCTGCCCAGTTGCCAGTCCTACCAC TCTCTACAGAGCCCTGGCTGCTCAGTTGCCAGTCCTACCAC < 41bp 0.56251653986429 0.791638428774901 0.611629 0.81787884 prediction 0.458243777821223 Functional Gain - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96072700 chr2:96072701 synonymous SNV . 0 22 hm5C_associated_SNPs_115581 0 0 1 BUD13 POSTAR2 ENCODE chr2:96072668-96072763
64251 chr2 47168597 47168597 1 + C A rs140303915 47168593 + 47168573 47168613 41 GTCTGCGCCCCCGTCGACCCCGCCCGCGAGTGCGCCCCAGC GTCTGCGCCCCCGTCGACCCCGCCAGCGAGTGCGCCCCAGC < 41bp 0.616515972309509 0.845637331666895 0.11508271 0.4103133 prediction 0.458242718714772 Functional Gain - TTC7A ENSG00000068724 UTR5 Human protein_coding chr2:47168593 chr2:47168597 . . 0 25 hm5C_associated_SNPs_115582 0 0 2 DDX3X POSTAR2 ENCODE chr2:47168547-47168625
64251 chr12 132210057 132210057 1 + C A UCEC 132210056 + 132210036 132210076 41 GGCCAAGCAGGCCCGGAACTCCCAGTTTGACTTTCTGCGCT GGCCAAGCAGGCCCGGAACTCACAGTTTGACTTTCTGCGCT < 41bp 0.58075793547352 0.809870054895544 0.33507884 0.37025875 prediction 0.458224238844048 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132210056 chr12:132210057 synonymous SNV . 0 22 hm5C_associated_SNPs_115585 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:132210043-132210102
64251 chr2 27015103 27015103 1 + C T LUAD 27015102 + 27015082 27015122 41 ATAAGGAAGCTGCCCTTCAGCCGCCTGGTAAGCTCCGGGAG ATAAGGAAGCTGCCCTTCAGCTGCCTGGTAAGCTCCGGGAG < 41bp 0.555496211019607 0.784605975137106 0.14621568 0.1688276 prediction 0.458219528234998 Functional Gain - CENPA ENSG00000115163 CDS Human protein_coding chr2:27015102 chr2:27015103 nonsynonymous SNV 0.213 4 22 hm5C_associated_SNPs_115586 0 0 2 BUD13 POSTAR2 ENCODE chr2:27015091-27015125
64251 chr22 50648639 50648639 1 + C T STAD 50648638 + 50648618 50648658 41 GCGCACGGCGCGGATGGTGGCCGAGTGGCAGTGTGTGGGCT GCGCACGGCGCGGATGGTGGCTGAGTGGCAGTGTGTGGGCT < 41bp 0.519908278121148 0.749015886963982 0.24079412 0.17980522 prediction 0.458215217685669 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50648638 chr22:50648639 unknown . 0 22 hm5C_associated_SNPs_115588 0 0 3 PPIG POSTAR2 ENCODE chr22:50648610-50648643
64251 chrX 48418674 48418674 1 + C A UCEC 48418673 + 48418653 48418693 41 GCAGACGCTGGTTTTGGTGGCCACAGGGGGTGGCCCGTGCG GCAGACGCTGGTTTTGGTGGCAACAGGGGGTGGCCCGTGCG < 41bp 0.559669912425405 0.78875781173289 0.91344965 0.9095354 prediction 0.458175798614971 Functional Gain - TBC1D25 ENSG00000068354 CDS Human protein_coding chrX:48418673 chrX:48418674 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_115592 0 0 2 RBM15 POSTAR2 ENCODE chrX:48418661-48418719
64251 chr5 137521736 137521736 1 + C A GBM 137521735 + 137521715 137521755 41 GACAAGAAGTTAGAAGAGGGCCAGAAGGTAATTACCACCAT GACAAGAAGTTAGAAGAGGGCAAGAAGGTAATTACCACCAT < 41bp 0.57968436031066 0.808770126697878 0.20882022 0.3443942 prediction 0.458171532774435 Functional Gain - KIF20A ENSG00000112984 CDS Human protein_coding chr5:137521735 chr5:137521736 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_115593 0 0 2 EFTUD2 POSTAR2 ENCODE chr5:137521687-137521760
64251 chr6 123039098 123039098 1 + C T UCEC 123039097 + 123039077 123039117 41 CCTCAAACTGGAGGCTCTCTCCGTGAAGGAAGGTAATACTC CCTCAAACTGGAGGCTCTCTCTGTGAAGGAAGGTAATACTC < 41bp 0.52805371767369 0.757126206086076 0.44592842 0.6339454 prediction 0.458144976824772 Functional Gain - PKIB ENSG00000135549 CDS Human protein_coding chr6:123039097 chr6:123039098 synonymous SNV . 0 22 hm5C_associated_SNPs_115595 0 0 1 UPF1 POSTAR2 ENCODE chr6:123039006-123039109
64251 chr17 8172143 8172143 1 + C T HNSC 8172142 + 8172122 8172162 41 GCTGCGAGGGATGGAGGGCGCCGTGCTGCCCGTGTGGAGTG GCTGCGAGGGATGGAGGGCGCTGTGCTGCCCGTGTGGAGTG < 41bp 0.501291225254515 0.730358520884253 0.15372518 0.18875936 prediction 0.458134591259477 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8172142 chr17:8172143 synonymous SNV . 0 22 hm5C_associated_SNPs_115597 0 0 2 EIF3H POSTAR2 ENCODE chr17:8172078-8172166
64251 chr2 55277208 55277208 1 - G C rs72912589 55277212 - 55277192 55277232 41 CCCACCGCCCCTGCCGCCGGCGCGCCCCTGATGGACTTCGG CCCACCGCCCCTGCCGCCGGCGCGGCCCTGATGGACTTCGG < 41bp 0.602697419639162 0.831764583444098 0.28285134 0.5758607 prediction 0.458134327609872 Functional Gain - RTN4 ENSG00000115310 CDS Human protein_coding chr2:55277212 chr2:55277208 nonsynonymous SNV 0.553 1 25 hm5C_associated_SNPs_115598 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:55277175-55277212
64251 chr19 58048653 58048653 1 + C T SKCM 58048652 + 58048632 58048672 41 GAGTGTCACAGGCCAGGACTCCAAAGCTAGGTCCTTCCATC GAGTGTCACAGGCCAGGACTCTAAAGCTAGGTCCTTCCATC < 41bp 0.511740120751286 0.740805567975817 0.5146428 0.73833835 prediction 0.458130894449061 Functional Gain - ZNF549 ENSG00000121406 CDS Human protein_coding chr19:58048652 chr19:58048653 nonsynonymous SNV 0.026 0 22 hm5C_associated_SNPs_115600 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58048629-58048658
64251 chr22 25019761 25019761 1 + C A rs185947660 25019760 + 25019740 25019780 41 CAACCAGGGTACAACTTCTCCCGGGAGAGCGTGGAGAGCCC CAACCAGGGTACAACTTCTCCAGGGAGAGCGTGGAGAGCCC < 41bp 0.575782259018107 0.804845865534225 0.39525324 0.52752143 prediction 0.458127213032235 Functional Gain - GGT1 ENSG00000100031 CDS Human protein_coding chr22:25019760 chr22:25019761 synonymous SNV . 0 22 hm5C_associated_SNPs_115602 0 0 2 BUD13 POSTAR2 ENCODE chr22:25019738-25019790
64251 chr10 8097743 8097743 1 + C T COAD 8097742 + 8097722 8097762 41 ACATGGACGCGGCGCAGTACCCGCTGCCGGAGGAGGTGGAT ACATGGACGCGGCGCAGTACCTGCTGCCGGAGGAGGTGGAT < 41bp 0.556527010398465 0.785584419828633 0.10287383 0.13683224 prediction 0.458114818860335 Functional Gain - GATA3 ENSG00000107485 CDS Human protein_coding chr10:8097742 chr10:8097743 nonsynonymous SNV 0.986 1 22 hm5C_associated_SNPs_115603 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:8097735-8097760
64251 chr12 108912565 108912565 1 + A G STAD 108912562 + 108912542 108912582 41 TACTACCATCACATCTACCACACAGTGGCCATCGAGGGCAA TACTACCATCACATCTACCACACGGTGGCCATCGAGGGCAA < 41bp 0.543042278159185 0.772099607926769 0.0348801 0.24706948 prediction 0.458114659535168 Functional Gain - FICD ENSG00000198855 CDS Human protein_coding chr12:108912562 chr12:108912565 synonymous SNV . 0 24 hm5C_associated_SNPs_115604 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:108912538-108912566
64251 chr19 54378144 54378144 1 + C G rs532899262 54378143 + 54378123 54378163 41 GGGTTCAAGCGATTCTCCTGCCCCAGCCTCCCAAGTAGCTG GGGTTCAAGCGATTCTCCTGCGCCAGCCTCCCAAGTAGCTG < 41bp 0.421669373843445 0.729053457133676 0.12142795 0.17996219 prediction 0.458106914267352 Functional Gain - MYADM ENSG00000232220 ncRNA_intronic Human antisense chr19:54378143 chr19:54378144 . . 0 22 hm5C_associated_SNPs_115608 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:54378133-54378185
64251 chr17 37070713 37070713 1 + C T SKCM 37070712 + 37070692 37070732 41 CAGCAGCAGCCTCACCACATCCCGACCAGTGCCCCGGGTGA CAGCAGCAGCCTCACCACATCTCGACCAGTGCCCCGGGTGA < 41bp 0.591070675187841 0.820106544854622 0.2941737 0.7423039 prediction 0.458071739333562 Functional Gain - LASP1 ENSG00000002834 CDS Human protein_coding chr17:37070712 chr17:37070713 nonsynonymous SNV 0.972 0 22 hm5C_associated_SNPs_115611 0 0 4 RPS3 POSTAR2 ENCODE chr17:37070589-37070729
64251 chr4 187209681 187209681 1 + A G STAD 187209678 + 187209658 187209698 41 GTAGGCATCACGAGCTGGGGCGAAGGCTGTGCTCAAAGGGA GTAGGCATCACGAGCTGGGGCGAGGGCTGTGCTCAAAGGGA < 41bp 0.554396775925812 0.783432407878251 0.08366683 0.5372931 prediction 0.458071263904878 Functional Gain - F11 ENSG00000088926 CDS Human protein_coding chr4:187209678 chr4:187209681 synonymous SNV . 0 24 hm5C_associated_SNPs_115612 0 0 3 DDX3X POSTAR2 ENCODE chr4:187209636-187209688
64251 chr11 65734964 65734964 1 + C T SKCM 65734963 + 65734943 65734983 41 CTGCGGGGACGGGGTCGCCGCCGAGTGTCCGAAGTGGAGGA CTGCGGGGACGGGGTCGCCGCTGAGTGTCCGAAGTGGAGGA < 41bp 0.491879318437608 0.729033957520478 0.3658469 0.20666656 prediction 0.458067915040957 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65734963 chr11:65734964 stopgain 0.008 0 22 hm5C_associated_SNPs_115614 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:65734964-65734994
64251 chr12 12788821 12788821 1 + C T SKCM 12788820 + 12788800 12788840 41 GAGTGCAAGAGAATGCCGAGCCCGAAAAAAGCTGAGATATC GAGTGCAAGAGAATGCCGAGCTCGAAAAAAGCTGAGATATC < 41bp 0.589228703008595 0.818254366813787 0.22204629 0.123102516 prediction 0.458051327610386 Functional Gain - CREBL2 ENSG00000111269 CDS Human protein_coding chr12:12788820 chr12:12788821 synonymous SNV . 0 22 hm5C_associated_SNPs_115617 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr12:12788800-12788830
64251 chr8 11606487 11606487 1 + C A LUAD 11606483 + 11606463 11606503 41 GTCAACTGTGGGGCTATGTCCACCCCGCTCTGGAGGCGAGA GTCAACTGTGGGGCTATGTCCACCACGCTCTGGAGGCGAGA < 41bp 0.303102748700921 0.729021538634476 0.20806724 0.1557248 prediction 0.458043077268952 Functional Gain - GATA4 ENSG00000136574 CDS Human protein_coding chr8:11606483 chr8:11606487 nonsynonymous SNV 0.979 5 25 hm5C_associated_SNPs_115618 0 0 2 DDX6 POSTAR2 ENCODE chr8:11606451-11606504
64251 chr17 73821373 73821373 1 + C A rs183263103 73821372 + 73821352 73821392 41 ACTCATTCTATGACCACCGCCCCCAACCAGCTGCCCCCAGC ACTCATTCTATGACCACCGCCACCAACCAGCTGCCCCCAGC < 41bp 0.550043364142976 0.779062594419991 0.023702174 0.021600217 prediction 0.458038460554031 Functional Gain - UNK ENSG00000132478 UTR3 Human protein_coding chr17:73821372 chr17:73821373 . . 0 22 hm5C_associated_SNPs_115621 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:73821360-73821416
64251 chr9 135919225 135919225 1 + C A rs150056568 135919224 + 135919204 135919244 41 GAGAAGGAGGCCTTTTTCCACCAGGAGCTGCCGCTCTACAT GAGAAGGAGGCCTTTTTCCACAAGGAGCTGCCGCTCTACAT < 41bp 0.585079920685633 0.814095371171339 0.72922 0.5215293 prediction 0.458030900971412 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919224 chr9:135919225 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_115623 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr9:135919213-135919245
64251 chr2 114356239 114356239 1 + T A rs11490622 114356235 + 114356215 114356255 41 GGGGCCCGGAGGAGCCTTTGCCCGTGTGTCAGACTCCATCC GGGGCCCGGAGGAGCCTTTGCCCGAGTGTCAGACTCCATCC < 41bp 0.633734521473569 0.862734606195124 0.23140755 0.49598122 prediction 0.458000169443111 Functional Gain - WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114356235 chr2:114356239 . . 0 25 hm5C_associated_SNPs_115626 0 0 2 BUD13 POSTAR2 ENCODE chr2:114356189-114356256
64251 chr11 376689 376689 1 + C T SKCM 376688 + 376668 376708 41 CCCTGCAGTGGAGCAGCCGCCCCCAAAGGTGTACGTGACCA CCCTGCAGTGGAGCAGCCGCCTCCAAAGGTGTACGTGACCA < 41bp 0.576623315803707 0.805623321533967 0.13515759 0.96551883 prediction 0.458000011460521 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:376688 chr11:376689 synonymous SNV . 0 22 hm5C_associated_SNPs_115627 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:376643-376698
64251 chr17 57287954 57287954 1 + C T COAD 57287953 + 57287933 57287973 41 CTGGAGGTGGACTCTCTTTACCTCATGCAGAAGCACACGAG CTGGAGGTGGACTCTCTTTACTTCATGCAGAAGCACACGAG < 41bp 0.479224689628735 0.728997686753677 0.15833306 0.2630012 prediction 0.457995373507353 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287953 chr17:57287954 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_115630 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:57287940-57287960
64251 chr1 107600578 107600578 1 + C G SARC 107600574 + 107600554 107600594 41 CGTGCAAGTAGGGGGAATATCTCCCCCTTTTCCCTCATAGC CGTGCAAGTAGGGGGAATATCTCCGCCTTTTCCCTCATAGC < 41bp 0.62031941836513 0.849315438890805 0.14854741 0.22428039 prediction 0.457992041051351 Functional Gain - PRMT6 ENSG00000198890 UTR3 Human protein_coding chr1:107600574 chr1:107600578 . . 0 25 hm5C_associated_SNPs_115631 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:107600566-107600593
64251 chr17 34854242 34854242 1 + C A MESO 34854241 + 34854221 34854261 41 CCTCTGAAAGCTGCCTACACCCATAGCCGTATTGGCCAGGA CCTCTGAAAGCTGCCTACACCAATAGCCGTATTGGCCAGGA < 41bp 0.576117775788398 0.805113359795473 0.08633825 0.18267536 prediction 0.45799116801415 Functional Gain - MYO19 ENSG00000141140 CDS Human other chr17:34854241 chr17:34854242 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_115632 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:34854226-34854250
64251 chr2 30457350 30457350 1 + C T BLCA 30457349 + 30457329 30457369 41 GAGGAGATCGGCCTCAGCCCCCGCAAGGATGGCCTTTCCTA GAGGAGATCGGCCTCAGCCCCTGCAAGGATGGCCTTTCCTA < 41bp 0.582972311516721 0.811961156816931 0.43067032 0.8265557 prediction 0.457977690600421 Functional Gain - LBH ENSG00000213626 CDS Human protein_coding chr2:30457349 chr2:30457350 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_115638 0 0 1 METAP2 POSTAR2 ENCODE chr2:30457288-30457360
64251 chr19 32845614 32845614 1 + C T LUSC 32845613 + 32845593 32845633 41 CAACAGCGATACAAGTTTGTCCGGAAACAATGTGGTGGAAT CAACAGCGATACAAGTTTGTCTGGAAACAATGTGGTGGAAT < 41bp 0.525553181026374 0.754537352600285 0.26153463 0.26737452 prediction 0.457968343147821 Functional Gain - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32845613 chr19:32845614 synonymous SNV . 0 22 hm5C_associated_SNPs_115640 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:32845514-32845667
64251 chr1 25775335 25775335 1 + T C UCEC 25775333 + 25775313 25775353 41 TTTTGTTTGTGTAGCATTCACGTCAAATATAATATGCCTGC TTTTGTTTGTGTAGCATTCACGCCAAATATAATATGCCTGC < 41bp 0.442349863980303 0.728966062059603 0.054416627 0.2114892 prediction 0.457932124119206 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25775333 chr1:25775335 nonsynonymous SNV 0.887 4 23 hm5C_associated_SNPs_115644 0 0 3 U2AF1 POSTAR2 ENCODE chr1:25775284-25775338
64251 chr8 126011707 126011707 1 + T C UCEC 126011705 + 126011685 126011725 41 TATAAGAAGTTCGGGGACTTCATCACTTTGGCCAACAGGGA TATAAGAAGTTCGGGGACTTCACCACTTTGGCCAACAGGGA < 41bp 0.59331161949604 0.822274976884498 0.16787124 0.34813714 prediction 0.457926714776915 Functional Gain - SQLE ENSG00000104549 CDS Human protein_coding chr8:126011705 chr8:126011707 nonsynonymous SNV 0.433 1 23 hm5C_associated_SNPs_115645 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:126011635-126011707
64251 chr1 212988989 212988989 1 + C A rs6700544 212988988 + 212988968 212989008 41 CGAGTCTCCTCCCTCAGCCTCCCAAGTAGCTGGGATTACAG CGAGTCTCCTCCCTCAGCCTCACAAGTAGCTGGGATTACAG < 41bp 0.56341652671754 0.792378806526647 0.09008941 0.08441791 prediction 0.457924559618214 Functional Gain - TATDN3 ENSG00000203705 UTR3 Human protein_coding chr1:212988988 chr1:212988989 . . 0 22 hm5C_associated_SNPs_115647 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212988956-212988996
64251 chr7 73106938 73106938 1 + C T LUSC 73106937 + 73106917 73106957 41 TTCTTTCAGGTCCGGGGATCCCGAGCTGTCCTGCAGCTGTA TTCTTTCAGGTCCGGGGATCCTGAGCTGTCCTGCAGCTGTA < 41bp 0.484255520181155 0.728961448697531 0.5093463 0.7619661 prediction 0.457922897395062 Functional Gain - BUD23 ENSG00000071462 CDS Human protein_coding chr7:73106937 chr7:73106938 stopgain 0.833 1 22 hm5C_associated_SNPs_115648 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:73106933-73106954
64251 chrX 154003527 154003527 1 + C T COAD 154003526 + 154003506 154003546 41 AAAAGCCCCGCAGGTAGTTGCCGAAGCAGCAAAAACTGCGA AAAAGCCCCGCAGGTAGTTGCTGAAGCAGCAAAAACTGCGA < 41bp 0.538589338326947 0.767535465468617 0.63745457 0.4367516 prediction 0.45789225428334 Functional Gain - DKC1 ENSG00000130826 CDS Human protein_coding chrX:154003526 chrX:154003527 synonymous SNV . 0 22 hm5C_associated_SNPs_115651 1 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chrX:154003467-154003535
64251 chr17 71232433 71232433 1 + C T PCPG 71232432 + 71232412 71232452 41 ATGTTACAGTTACTGAGACTCCAGAAAAGAACACAGAATCC ATGTTACAGTTACTGAGACTCTAGAAAAGAACACAGAATCC < 41bp 0.541702290910216 0.770646117017005 0.09990847 0.16577 prediction 0.457887652213578 Functional Gain - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232432 chr17:71232433 nonsynonymous SNV 0.010 1 22 hm5C_associated_SNPs_115653 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr17:71232414-71232433
64251 chr20 32354690 32354690 1 + C T SKCM 32354689 + 32354669 32354709 41 CCCTGCCGGGTGCGCCACAGCCCCAGGCCTTGTCCACAGCT CCCTGCCGGGTGCGCCACAGCTCCAGGCCTTGTCCACAGCT < 41bp 0.601490305561866 0.830431202132789 0.052241802 0.87182474 prediction 0.457881793141845 Functional Gain - ZNF341 ENSG00000131061 CDS Human protein_coding chr20:32354689 chr20:32354690 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_115655 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:32354676-32354714
64251 chr9 37080331 37080331 1 + C A ESCA 37080330 + 37080310 37080350 41 CGTGTCTGCCCTTTTTATCTCCCCGCAAGGCCCCCAGTCTT CGTGTCTGCCCTTTTTATCTCACCGCAAGGCCCCCAGTCTT < 41bp 0.492620485073485 0.728935557491187 0.08028418 0.11186269 prediction 0.457871114982374 Functional Gain - EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37080330 chr9:37080331 . . 0 22 hm5C_associated_SNPs_115657 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr9:37080313-37080334
64251 chr18 33848543 33848543 1 + C T SKCM 33848542 + 33848522 33848562 41 TGCATCATTGGATTTATCCTCCCCATGTTTCCTGTCTGTAG TGCATCATTGGATTTATCCTCTCCATGTTTCCTGTCTGTAG < 41bp 0.459654436001086 0.728924213271495 0.031962544 0.9461632 prediction 0.45784842654299 Functional Gain - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33848542 chr18:33848543 synonymous SNV . 0 22 hm5C_associated_SNPs_115661 0 0 1 U2AF2 POSTAR2 ENCODE chr18:33848530-33848591
64251 chr22 42300878 42300878 1 + T C rs80119854 42300876 + 42300856 42300896 41 CACCTCCCCAGGTGTTCCTGCATGAAGCCACCGTGCGCCTG CACCTCCCCAGGTGTTCCTGCACGAAGCCACCGTGCGCCTG < 41bp 0.469414024663934 0.728910129446239 0.6529985 0.6221651 prediction 0.457820258892478 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42300876 chr22:42300878 synonymous SNV . 0 23 hm5C_associated_SNPs_115666 0 0 5 CPSF6 POSTAR2 ENCODE chr22:42300752-42300890
64251 chr19 33463214 33463214 1 + C G rs79371948 33463213 + 33463193 33463233 41 CTGGGACGGTGGGGTTCCTGCCGGCTGTATTCGGGCCTTGG CTGGGACGGTGGGGTTCCTGCGGGCTGTATTCGGGCCTTGG < 41bp 0.455989639835907 0.728909650963659 0.8965707 0.9085916 prediction 0.457819301927318 Functional Gain - FAAP24 ENSG00000131944 UTR5 Human protein_coding chr19:33463213 chr19:33463214 . . 0 22 hm5C_associated_SNPs_115667 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:33463212-33463232
64251 chr20 30154072 30154072 1 + C G HNSC 30154071 + 30154051 30154091 41 TCCTGTCCTGGTGGCGCTGGCCAAGGGAGAAGTGACAGAGA TCCTGTCCTGGTGGCGCTGGCGAAGGGAGAAGTGACAGAGA < 41bp 0.405350753896575 0.728908323369557 0.38200557 0.75140357 prediction 0.457816646739115 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30154071 chr20:30154072 synonymous SNV . 0 22 hm5C_associated_SNPs_115669 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:30154042-30154091
64251 chr3 49449859 49449859 1 + C A rs115911627 49449855 + 49449835 49449875 41 ACCCCGGGTGGGGCGAGGGCCAGTCATGGCGGAGTCCTGGT ACCCCGGGTGGGGCGAGGGCCAGTAATGGCGGAGTCCTGGT < 41bp 0.562980351073093 0.791886386530296 0.72598094 0.911852 prediction 0.457812070914407 Functional Gain - TCTA ENSG00000145022 UTR5 Human protein_coding chr3:49449855 chr3:49449859 . . 0 25 hm5C_associated_SNPs_115670 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:49449859-49449860
64251 chr2 11767109 11767109 1 + C T HNSC 11767108 + 11767088 11767128 41 ACAGAGGGATGTCCCGGAAGCCGGAGGACCTTTATGTGCGG ACAGAGGGATGTCCCGGAAGCTGGAGGACCTTTATGTGCGG < 41bp 0.534277524864025 0.763175670894207 0.64884186 0.40592152 prediction 0.457796292060364 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11767108 chr2:11767109 nonsynonymous SNV 0.917 0 22 hm5C_associated_SNPs_115674 0 0 4 BUD13 POSTAR2 ENCODE chr2:11767064-11767153
64251 chr6 13977897 13977897 1 + C T STAD 13977896 + 13977876 13977916 41 CTGCTGTTTCAGACATCCATCCGGGTGTTAGTGTGGTTGCT CTGCTGTTTCAGACATCCATCTGGGTGTTAGTGTGGTTGCT < 41bp 0.537253740505242 0.766146703333055 0.9278533 0.9000945 prediction 0.457785925655625 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977896 chr6:13977897 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_115676 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13977863-13977897
64251 chr14 76905913 76905913 1 + C T UCEC 76905912 + 76905892 76905932 41 GGGCTGGGAGGCACCCCATGCCGCAAGAGCTACGAGGACTG GGGCTGGGAGGCACCCCATGCTGCAAGAGCTACGAGGACTG < 41bp 0.560562273533256 0.789434215522038 0.5743842 0.5535873 prediction 0.457743883977563 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76905912 chr14:76905913 nonsynonymous SNV 0.926 4 22 hm5C_associated_SNPs_115682 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr14:76905894-76905922
64251 chr12 100904652 100904652 1 + C A OV 100904648 + 100904628 100904668 41 ATGTTCAGTTTCCCCAAGTTCAACCACAGATTTCCTCGTCA ATGTTCAGTTTCCCCAAGTTCAACAACAGATTTCCTCGTCA < 41bp 0.30348245766808 0.728871807680104 0.06702173 0.064368665 prediction 0.457743615360209 Functional Gain - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100904648 chr12:100904652 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_115683 0 0 2 NOL12 POSTAR2 ENCODE chr12:100904558-100904757
64251 chr9 90219978 90219978 1 + C T UVM 90219977 + 90219957 90219997 41 TCCAGCCGGCGGGGTGTGAGCCGCGAGGACATCGAGCGGGA TCCAGCCGGCGGGGTGTGAGCTGCGAGGACATCGAGCGGGA < 41bp 0.568203547855982 0.797074543552507 0.38525134 0.43284196 prediction 0.45774199139305 Functional Gain - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90219977 chr9:90219978 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_115684 0 0 5 GRWD1 POSTAR2 ENCODE chr9:90219876-90220002
64251 chrX 68836453 68836453 1 + C T rs182251004 68836452 + 68836432 68836472 41 GGTGGCCTCGACCCTGACAGCCCCATCACCAGTCACCTTGG GGTGGCCTCGACCCTGACAGCTCCATCACCAGTCACCTTGG < 41bp 0.55672158989493 0.785588639758562 0.08633894 0.8742738 prediction 0.457734099727264 Functional Gain - EDA ENSG00000158813 CDS Human protein_coding chrX:68836452 chrX:68836453 nonsynonymous SNV 0.953 2 22 hm5C_associated_SNPs_115687 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chrX:68836435-68836476
64251 chr11 32954652 32954652 1 + T G rs201152451 32954649 + 32954629 32954669 41 CGGGCTCAGAATTTGCCAGACTCTAGCCCGACCCAGAATTA CGGGCTCAGAATTTGCCAGACTCGAGCCCGACCCAGAATTA < 41bp 0.350998414166544 0.728855633633531 0.16425282 0.14097178 prediction 0.457711267267062 Functional Gain - QSER1 ENSG00000060749 CDS Human protein_coding chr11:32954649 chr11:32954652 synonymous SNV . 0 24 hm5C_associated_SNPs_115690 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:32954612-32954668
64251 chr17 16120539 16120539 1 + T G STAD 16120537 + 16120517 16120557 41 CAGGCTCAGTGCTGCTTACCCATCATGGAAGCAATGTGGCT CAGGCTCAGTGCTGCTTACCCAGCATGGAAGCAATGTGGCT < 41bp 0.581515226742077 0.810369249889952 0.059134454 0.19344649 prediction 0.45770804629575 Functional Gain - PIGL ENSG00000108474 UTR5 Human protein_coding chr17:16120537 chr17:16120539 . . 0 23 hm5C_associated_SNPs_115691 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:16120527-16120552
64251 chr6 34738119 34738119 1 + C T SKCM 34738118 + 34738098 34738138 41 CACCCCATATGGGGGGCCCTCCCATGATGCCAATGATGGGC CACCCCATATGGGGGGCCCTCTCATGATGCCAATGATGGGC < 41bp 0.585513380472626 0.814362380419882 0.37368664 0.18784022 prediction 0.457697999894511 Functional Gain - SNRPC ENSG00000124562 CDS Human protein_coding chr6:34738118 chr6:34738119 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_115693 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:34738091-34738131
64251 chr17 29036734 29036734 1 + C A rs540642135 29036733 + 29036713 29036753 41 CACCTCCTACCAGCTTCCCCCCAGCCCCGGCTCCGGGAGAT CACCTCCTACCAGCTTCCCCCAAGCCCCGGCTCCGGGAGAT < 41bp 0.514584185104744 0.743430334314581 0.18213403 0.41862938 prediction 0.457692298419675 Functional Gain - SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29036733 chr17:29036734 . . 0 22 hm5C_associated_SNPs_115694 0 0 1 HNRNPC POSTAR2 ENCODE chr17:29036645-29036734
64251 chr6 139363897 139363897 1 + C T COAD 139363896 + 139363876 139363916 41 GTGAAATTTGGGGTCCTCTTCCGTGATGATAAATGTGCCAA GTGAAATTTGGGGTCCTCTTCTGTGATGATAAATGTGCCAA < 41bp 0.495911025364703 0.728844775553311 0.18557227 0.08180705 prediction 0.457689551106622 Functional Gain - ABRACL ENSG00000146386 CDS Human protein_coding chr6:139363896 chr6:139363897 nonsynonymous SNV 0.992 0 22 hm5C_associated_SNPs_115695 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:139363869-139363898
64251 chr7 157060444 157060444 1 + A G UCEC 157060441 + 157060421 157060461 41 AATGTGCCGCTGGCTTTGAGCTGAGCTGAAGCTGATGCTGG AATGTGCCGCTGGCTTTGAGCTGGGCTGAAGCTGATGCTGG < 41bp 0.496230597325045 0.728840259075285 0.51354337 0.8427602 prediction 0.457680518150571 Functional Gain - UBE3C ENSG00000009335 CDS Human protein_coding chr7:157060441 chr7:157060444 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_115698 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:157060402-157060453
64251 chr20 4155802 4155802 1 + T A COAD 4155798 + 4155778 4155818 41 CGTGTGGTGGTGATCGGCGCCGGCTTGGCTGGCCTGGCTGC CGTGTGGTGGTGATCGGCGCCGGCATGGCTGGCCTGGCTGC < 41bp 0.655822127711089 0.884652288655392 0.808781 0.85682106 prediction 0.457660321888606 Functional Gain - SMOX ENSG00000088826 CDS Human protein_coding chr20:4155798 chr20:4155802 nonsynonymous SNV 0.915 4 25 hm5C_associated_SNPs_115700 0 0 1 DDX3X POSTAR2 ENCODE chr20:4155778-4155828
64251 chrX 153060182 153060182 1 + C G COAD 153060181 + 153060161 153060201 41 CTCGGCGCCCTGGCGCTGCTCCTGCTGTCCAGCCTCTCCCG CTCGGCGCCCTGGCGCTGCTCGTGCTGTCCAGCCTCTCCCG < 41bp 0.406966857803009 0.72882690630478 0.4483471 0.7812207 prediction 0.457653812609561 Functional Gain - SSR4 ENSG00000180879 CDS Human protein_coding chrX:153060181 chrX:153060182 nonsynonymous SNV 0.953 0 22 hm5C_associated_SNPs_115703 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153060101-153060209
64251 chr1 161199501 161199501 1 + C T SKCM 161199500 + 161199480 161199520 41 ACCACTGGGCTCCCTTTGAACCCGGCCCAATCTTTGGTCCC ACCACTGGGCTCCCTTTGAACTCGGCCCAATCTTTGGTCCC < 41bp 0.52514456199415 0.753969897463256 0.28495896 0.26284644 prediction 0.457650670938212 Functional Gain - NR1I3 ENSG00000143257 CDS Human protein_coding chr1:161199500 chr1:161199501 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_115708 0 0 1 UPF1 POSTAR2 ENCODE chr1:161199483-161199575
64251 chr16 2812482 2812482 1 + C G rs79910471 2812481 + 2812461 2812501 41 TGGCAGGTCACGCTCTAGAACCCCAGCTAGACGTGGCCGCT TGGCAGGTCACGCTCTAGAACGCCAGCTAGACGTGGCCGCT < 41bp 0.414778715719772 0.728824296775627 0.29247367 0.53557754 prediction 0.457648593551254 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2812481 chr16:2812482 synonymous SNV . 0 22 hm5C_associated_SNPs_115709 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2812281-2812483
64251 chr9 74526699 74526699 1 + C T LUAD 74526698 + 74526678 74526718 41 CGTTCCAGACCTCAGAAGCACCAGAATACGTTTAGCTTCAA CGTTCCAGACCTCAGAAGCACTAGAATACGTTTAGCTTCAA < 41bp 0.519391499227097 0.748213306684469 0.21389124 0.21899039 prediction 0.457643614914743 Functional Gain - C9orf85 ENSG00000155621 CDS Human protein_coding chr9:74526698 chr9:74526699 stopgain 1.000 1 22 hm5C_associated_SNPs_115711 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:74526644-74526704
64251 chr22 35719874 35719874 1 + C T LUSC 35719873 + 35719853 35719893 41 GCCCGCCCCGCCCATACTCTCCGGTGACACGCCCATAGCAC GCCCGCCCCGCCCATACTCTCTGGTGACACGCCCATAGCAC < 41bp 0.508904294526368 0.73772465197898 0.9208557 0.75813687 prediction 0.457640714905225 Functional Gain - TOM1 ENSG00000100284 CDS Human protein_coding chr22:35719873 chr22:35719874 synonymous SNV 0.002 0 22 hm5C_associated_SNPs_115712 0 0 1 EFTUD2 POSTAR2 ENCODE chr22:35719822-35719897
64251 chr1 29652675 29652675 1 + T A rs1062921 29652671 + 29652651 29652691 41 CCCTGAAGGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGC CCCTGAAGGTCCTGGGGAAGCAGGACTCAATTCTGAATAGC < 41bp 0.469002799048482 0.728806411078376 0.35293168 0.74624944 prediction 0.457612822156751 Functional Gain - PTPRU ENSG00000060656 UTR3 Human protein_coding chr1:29652671 chr1:29652675 . . 0 25 hm5C_associated_SNPs_115717 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:29652627-29652678
64251 chr1 36748260 36748260 1 + C T SKCM 36748259 + 36748239 36748279 41 TTCATTTTCGAAGTCTCGGTCCCGAAGCCGATCTCTCTCTC TTCATTTTCGAAGTCTCGGTCTCGAAGCCGATCTCTCTCTC < 41bp 0.599679821304833 0.82848262919346 0.3669923 0.8967084 prediction 0.457605615777254 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36748259 chr1:36748260 synonymous SNV . 0 22 hm5C_associated_SNPs_115718 0 0 11 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:36748239-36748264
64251 chr10 121203154 121203154 1 + C T OV 121203153 + 121203133 121203173 41 ATCGAGGGCCAGTCGCCGTTCCGCGGCCGCAAGGAGAAGGT ATCGAGGGCCAGTCGCCGTTCTGCGGCCGCAAGGAGAAGGT < 41bp 0.578222563853724 0.807019667222954 0.4127524 0.2945143 prediction 0.457594206738461 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121203153 chr10:121203154 nonsynonymous SNV 0.333 4 22 hm5C_associated_SNPs_115720 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:121203154-121203211
64251 chr4 88901214 88901214 1 + C T CESC 88901213 + 88901193 88901233 41 TGTAGCTTTACAACAAATACCCAGATGCTGTGGCCACATGG TGTAGCTTTACAACAAATACCTAGATGCTGTGGCCACATGG < 41bp 0.485968808492013 0.728784376300242 0.6264204 0.33322233 prediction 0.457568752600484 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88901213 chr4:88901214 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_115724 0 0 3 GRWD1 POSTAR2 ENCODE chr4:88901198-88901273
64251 chr16 29828601 29828601 1 + A G COAD 29828598 + 29828578 29828618 41 CAAAGGACTCCCTGATTGACCGGAGACGCACCCCAGGTACA CAAAGGACTCCCTGATTGACCGGGGACGCACCCCAGGTACA < 41bp 0.550033337180504 0.778813044635315 0.6469625 0.92500806 prediction 0.457559414909623 Functional Gain - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29828598 chr16:29828601 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_115725 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:29828553-29828610
64251 chr22 29445263 29445263 1 + C A UCEC 29445259 + 29445239 29445279 41 GTCGGCAGCAGAGGGTGACCCTGCCGGTGCATTACCCCGGC GTCGGCAGCAGAGGGTGACCCTGCAGGTGCATTACCCCGGC < 41bp 0.7068309469123 0.935602092564856 0.5196567 0.5225903 prediction 0.457542291305112 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445259 chr22:29445263 nonsynonymous SNV 0.983 4 25 hm5C_associated_SNPs_115730 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29445255-29445290
64251 chr9 33351709 33351709 1 + C A rs75231196 33351708 + 33351688 33351728 41 GCAAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCAC GCAAGCAGCCCTGCACCACCCACAGAGCTGACTGTGGTCAC < 41bp 0.46789580530614 0.728768506275333 0.1563721 0.16049916 prediction 0.457537012550665 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33351708 chr9:33351709 nonsynonymous SNV 0.800 1 22 hm5C_associated_SNPs_115731 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:33351700-33351720
64251 chr5 14693129 14693129 1 + T C UCEC 14693127 + 14693107 14693147 41 GATCGGCACTATAACATCCCCGTCAGAGTGTGTGAGGAGAC GATCGGCACTATAACATCCCCGCCAGAGTGTGTGAGGAGAC < 41bp 0.457098611508344 0.728763003423777 0.010268271 0.09504399 prediction 0.457526006847554 Functional Gain - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14693127 chr5:14693129 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_115733 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:14693102-14693132
64251 chr12 124086796 124086796 1 + C A COAD 124086795 + 124086775 124086815 41 TGGGCTTCCCGTACATGACGCCGGTGCAGGTATCGGTTCCC TGGGCTTCCCGTACATGACGCAGGTGCAGGTATCGGTTCCC < 41bp 0.47851354738572 0.728751032574644 0.580308 0.81841046 prediction 0.457502065149288 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124086795 chr12:124086796 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115738 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585673 chr12:124086782-124086805
64251 chr5 72794525 72794525 1 + C G rs375502008 72794521 + 72794501 72794541 41 GACAGGCGCACCCGCTCAGGCTGACTCTCGGGGGCGAGGTC GACAGGCGCACCCGCTCAGGCTGAGTCTCGGGGGCGAGGTC < 41bp 0.61459675405148 0.843344113430479 0.07627389 0.083298445 prediction 0.457494718757999 Functional Gain - BTF3 ENSG00000145741 CDS Human protein_coding chr5:72794521 chr5:72794525 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_115740 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:72794492-72794528
64251 chrX 153663807 153663807 1 + C T UCEC 153663806 + 153663786 153663826 41 AAGGGTAGTCTCCTCGTGGCCCGCACGCAGCCCTCTCCCTG AAGGGTAGTCTCCTCGTGGCCTGCACGCAGCCCTCTCCCTG < 41bp 0.531757255787021 0.760502572612894 0.077174336 0.091478616 prediction 0.457490633651746 Functional Gain - ATP6AP1 ENSG00000071553 CDS Human protein_coding chrX:153663806 chrX:153663807 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_115741 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153663782-153663808
64251 chr11 60610015 60610015 1 + C A LIHC 60610014 + 60609994 60610034 41 GTACTGGCCTCGGAGTTGGCCCAGAATAAGGAGGAGCTGAC GTACTGGCCTCGGAGTTGGCCAAGAATAAGGAGGAGCTGAC < 41bp 0.568274570529372 0.797016636591236 0.42893672 0.50501925 prediction 0.457484132123729 Functional Gain - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60610014 chr11:60610015 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_115743 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:60609980-60610020
64251 chr14 45431656 45431656 1 + T A HNSC 45431652 + 45431632 45431672 41 CTGCCCCCTCCGCGCTGCTTCTGCTGCCGCCCTTTCCAGTC CTGCCCCCTCCGCGCTGCTTCTGCAGCCGCCCTTTCCAGTC < 41bp 0.650244001893693 0.878986047888025 0.064445674 0.20325899 prediction 0.457484091988663 Functional Gain - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45431652 chr14:45431656 nonsynonymous SNV 0.516 0 25 hm5C_associated_SNPs_115744 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:45431652-45431680
64251 chr16 88772907 88772907 1 + C G rs533608663 88772906 + 88772886 88772926 41 GGCGCGCCCTCGCGCTGTCGCCGCCACAGTCTGCGACGGGA GGCGCGCCCTCGCGCTGTCGCGGCCACAGTCTGCGACGGGA < 41bp 0.433828157566237 0.728728042655076 0.80065066 0.9264526 prediction 0.457456085310151 Functional Gain - CTU2 ENSG00000174177 UTR5 Human protein_coding chr16:88772906 chr16:88772907 . . 0 22 hm5C_associated_SNPs_115752 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:88772900-88772920
64251 chr3 193855944 193855944 1 + C T GBM 193855943 + 193855923 193855963 41 CACCAGCAACAGCGGCACCTCCGTGGGCCCCAACGCAGTGT CACCAGCAACAGCGGCACCTCTGTGGGCCCCAACGCAGTGT < 41bp 0.532033301703217 0.760760848443707 0.14785612 0.11430138 prediction 0.45745509348098 Functional Gain - HES1 ENSG00000114315 CDS Human protein_coding chr3:193855943 chr3:193855944 synonymous SNV . 0 22 hm5C_associated_SNPs_115753 0 0 2 FMR1 POSTAR2 ENCODE chr3:193855895-193855973
64251 chrX 139866289 139866289 1 + A G LUSC 139866286 + 139866266 139866306 41 TCCAGACTATCCATGTCTTCCAGAAAATCCTTGTCTTCCCT TCCAGACTATCCATGTCTTCCAGGAAATCCTTGTCTTCCCT < 41bp 0.506402269344019 0.7351245209086 0.14551535 0.40644 prediction 0.457444503129163 Functional Gain - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139866286 chrX:139866289 synonymous SNV . 0 24 hm5C_associated_SNPs_115755 0 0 8 FUS POSTAR2 GSE40653,GSM998875 chrX:139866280-139866300
64251 chr17 57287666 57287666 1 + C A UCEC 57287665 + 57287645 57287685 41 CTCTCTTTCGCCACCAAGATCCTGGGGATCCAGGACCTGGA CTCTCTTTCGCCACCAAGATCATGGGGATCCAGGACCTGGA < 41bp 0.462937144302018 0.728719050743369 0.87556124 0.9096824 prediction 0.457438101486738 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287665 chr17:57287666 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_115756 0 0 2 RBM15 POSTAR2 ENCODE chr17:57287624-57287676
64251 chr5 32780843 32780843 1 + T A LUAD 32780839 + 32780819 32780859 41 GTCCTGTAGGTATCGCCGGGCAGGTGTCCATAGATGCCAAC GTCCTGTAGGTATCGCCGGGCAGGAGTCCATAGATGCCAAC < 41bp 0.41809337478817 0.728717966489636 0.47546685 0.48211944 prediction 0.457435932979272 Functional Gain - NPR3 ENSG00000113389 CDS Human protein_coding chr5:32780839 chr5:32780843 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_115758 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:32780842-32780875
64251 chr17 46024107 46024107 1 + C T COAD 46024106 + 46024086 46024126 41 CCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCT CCTTTGGGGCCCATGACCCACTGCGGGGAGGAAGACTGGCT < 41bp 0.552646460531858 0.781354919314046 0.3820151 0.3617652 prediction 0.457416917564376 Functional Gain - PNPO ENSG00000108439 CDS Human protein_coding chr17:46024106 chr17:46024107 nonsynonymous SNV 0.906 0 22 hm5C_associated_SNPs_115762 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr17:46024088-46024116
64251 chr17 12044530 12044530 1 + C G BRCA 12044529 + 12044509 12044549 41 GCATGCTATGTTTGTAAAATCCTGGATCAAATGCCAGCTAC GCATGCTATGTTTGTAAAATCGTGGATCAAATGCCAGCTAC < 41bp 0.420795632973691 0.728705257885003 0.25402376 0.5967789 prediction 0.457410515770006 Functional Gain - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12044529 chr17:12044530 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_115763 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:12044524-12044540
64251 chr1 32502560 32502560 1 + T G SKCM 32502558 + 32502538 32502578 41 CAATTTCTAGAGCTGTCCTACTTGAATGGAGTACCTGAACC CAATTTCTAGAGCTGTCCTACTGGAATGGAGTACCTGAACC < 41bp 0.65972849155825 0.888429853389468 0.30150044 0.3325547 prediction 0.457402723662435 Functional Gain - KHDRBS1 ENSG00000121774 CDS Human protein_coding chr1:32502558 chr1:32502560 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_115766 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32502510-32502579
64251 chr19 35510304 35510304 1 + C T rs73038384 35510303 + 35510283 35510323 41 CTGTCCCTGCAGACGCTGTTCCGGCGCGGCCCCCAGGCCGG CTGTCCCTGCAGACGCTGTTCTGGCGCGGCCCCCAGGCCGG < 41bp 0.53061993816557 0.759321291224079 0.91213334 0.7805879 prediction 0.457402706117017 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510303 chr19:35510304 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_115767 0 0 3 METAP2 POSTAR2 ENCODE chr19:35510302-35510337
64251 chr12 113867083 113867083 1 + C T LUSC 113867082 + 113867062 113867102 41 GAGGCTGCAGGGGGAGGGGGCCGAGGTTCAGCTGACTGGAA GAGGCTGCAGGGGGAGGGGGCTGAGGTTCAGCTGACTGGAA < 41bp 0.498747642970643 0.728700666404252 0.891732 0.88679457 prediction 0.457401332808504 Functional Gain - SDSL ENSG00000139410 CDS Human protein_coding chr12:113867082 chr12:113867083 synonymous SNV . 0 22 hm5C_associated_SNPs_115768 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr12:113867064-113867095
64251 chr5 145638073 145638073 1 + C A UCEC 145638072 + 145638052 145638092 41 TTCGATTAATAGCAACATAACCAGAGTAGTTCTTGAACCAG TTCGATTAATAGCAACATAACAAGAGTAGTTCTTGAACCAG < 41bp 0.553500062192471 0.782199599085235 0.4123364 0.4722108 prediction 0.457399073785526 Functional Gain - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145638072 chr5:145638073 synonymous SNV . 0 22 hm5C_associated_SNPs_115770 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704215 chr5:145638060-145638080
64251 chr1 231700444 231700444 1 + T C COAD 231700442 + 231700422 231700462 41 TTGAAGTGAGCCAGTTTTTACGTCAGGTTTATGATGGGTTT TTGAAGTGAGCCAGTTTTTACGCCAGGTTTATGATGGGTTT < 41bp 0.443932879503116 0.72869052325319 0.21035528 0.27321863 prediction 0.457381046506379 Functional Gain - TSNAX ENSG00000116918 CDS Human protein_coding chr1:231700442 chr1:231700444 synonymous SNV . 0 23 hm5C_associated_SNPs_115771 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:231700359-231700465
64251 chr6 116752177 116752177 1 + T C UCEC 116752174 + 116752154 116752194 41 TCTGACCATCATGGAGAAATCTCTGGTCTTGCTCAGGGAGG TCTGACCATCATGGAGAAATCTCCGGTCTTGCTCAGGGAGG < 41bp 0.500560295160517 0.729244865088932 0.21276113 0.475004 prediction 0.45736913985683 Functional Gain - DSE ENSG00000111817 CDS Human protein_coding chr6:116752174 chr6:116752177 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_115775 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr6:116752150-116752200
64251 chr4 951626 951626 1 + C A MESO 951625 + 951605 951645 41 TTCTCAGCGAAGACAACGTCCCGGACCCCAAGGATGTGAAG TTCTCAGCGAAGACAACGTCCAGGACCCCAAGGATGTGAAG < 41bp 0.462442349820365 0.728676548826487 0.18090987 0.30672836 prediction 0.457353097652974 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:951625 chr4:951626 nonsynonymous SNV 0.366 4 22 hm5C_associated_SNPs_115777 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:951616-951635
64251 chr19 52817449 52817449 1 + C A rs201346974 52817445 + 52817425 52817465 41 ACGTGGCCATAGAATTCTCTCAGGCGGAGTGGAAATGCCTG ACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTG < 41bp 0.696106476006791 0.924780787475235 0.71821827 0.90708095 prediction 0.457348622936888 Functional Gain - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52817445 chr19:52817449 nonsynonymous SNV 0.386 0 25 hm5C_associated_SNPs_115779 0 0 4 LIN28B POSTAR2 ENCODE chr19:52817410-52817491
64251 chrX 106888486 106888486 1 + C T STAD 106888485 + 106888465 106888505 41 AAGAAGGCCAATGAAGTGGACCGCATGGTGCTTGTGGGAGA AAGAAGGCCAATGAAGTGGACTGCATGGTGCTTGTGGGAGA < 41bp 0.574054778684685 0.802726001311496 0.087979734 0.27082264 prediction 0.457342445253623 Functional Gain - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106888485 chrX:106888486 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_115781 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:106888455-106888505
64251 chr1 173455410 173455410 1 + C T SKCM 173455409 + 173455389 173455429 41 TACAGGTGTTTGTTTTTGGTCCTGATAAGAAGCTGAAGCTG TACAGGTGTTTGTTTTTGGTCTTGATAAGAAGCTGAAGCTG < 41bp 0.554986234772602 0.783652846892733 0.14448759 0.1945354 prediction 0.457333224240263 Functional Gain - PRDX6 ENSG00000117592 CDS Human protein_coding chr1:173455409 chr1:173455410 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115782 0 0 30 TARDBP POSTAR2 DRA001158,DRS012386 chr1:173455394-173455420
64251 chr13 114164666 114164666 1 + C T SKCM 114164665 + 114164645 114164685 41 CACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAA CACGCAGAGCGTCTTCATTTCTACGTGTCTGTCCTTGTCAA < 41bp 0.461405239882244 0.728643974399916 0.38684124 0.09165758 prediction 0.457287948799833 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114164665 chr13:114164666 synonymous SNV . 0 22 hm5C_associated_SNPs_115790 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr13:114164661-114164675
64251 chr5 176860999 176860999 1 + A G LUSC 176860996 + 176860976 176861016 41 ACGGGGGCGACCTCAAGTTCCACATCTACCACATGGGCCAG ACGGGGGCGACCTCAAGTTCCACGTCTACCACATGGGCCAG < 41bp 0.480329112194101 0.728609718399676 0.028795838 0.093604654 prediction 0.457219436799351 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176860996 chr5:176860999 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_115796 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:176860961-176860999
64251 chr11 122774968 122774968 1 + C T LUSC 122774967 + 122774947 122774987 41 AGAAGTCGAGCAGCCTTTCTCCGTACGTGAAGAGCTCAAGT AGAAGTCGAGCAGCCTTTCTCTGTACGTGAAGAGCTCAAGT < 41bp 0.475753345220268 0.728609588688632 0.4498822 0.40263313 prediction 0.457219177377263 Functional Gain - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122774967 chr11:122774968 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_115797 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:122774960-122774980
64251 chr17 40850897 40850897 1 + C T BLCA 40850896 + 40850876 40850916 41 GCCCCCGGGATCAGAACCTACCCCAGATCCTGGAGGAGTCC GCCCCCGGGATCAGAACCTACTCCAGATCCTGGAGGAGTCC < 41bp 0.457076086395218 0.728609156605793 0.19479635 0.9378831 prediction 0.457218313211586 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40850896 chr17:40850897 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_115798 0 0 2 FUS POSTAR2 GSE43308,GSM1060381 chr17:40850880-40850900
64251 chr2 190531324 190531324 1 + C G PRAD 190531320 + 190531300 190531340 41 AGTAATTTGGGCAAGAGTTTCTGCCTCTCTTCAGTTGGCAC AGTAATTTGGGCAAGAGTTTCTGCGTCTCTTCAGTTGGCAC < 41bp 0.451320381764698 0.728608085688283 0.32077897 0.40592486 prediction 0.457216171376565 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190531320 chr2:190531324 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_115799 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr2:190531251-190531367
64251 chr1 154296167 154296167 1 + A G COAD 154296164 + 154296144 154296184 41 AGCCTGTGGTGGTGGGGATGCTGATCCTGGCCCTCGGGTTA AGCCTGTGGTGGTGGGGATGCTGGTCCTGGCCCTCGGGTTA < 41bp 0.519923553827447 0.748530232429945 0.64205927 0.8019844 prediction 0.457213357204997 Functional Gain - AQP10 ENSG00000143595 CDS Human protein_coding chr1:154296164 chr1:154296167 nonsynonymous SNV 0.651 1 24 hm5C_associated_SNPs_115800 0 0 1 DDX24 POSTAR2 ENCODE chr1:154296160-154296223
64251 chr2 44457626 44457626 1 + T C OV 44457624 + 44457604 44457644 41 TCAGGCAAATGAGAATTAATCATAGGGGAAACTACCGACAA TCAGGCAAATGAGAATTAATCACAGGGGAAACTACCGACAA < 41bp 0.554721619811561 0.783326029886316 0.92084265 0.91955173 prediction 0.457208820149511 Functional Gain - PPM1B ENSG00000138032 CDS Human protein_coding chr2:44457624 chr2:44457626 synonymous SNV . 0 23 hm5C_associated_SNPs_115801 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:44457600-44457640
64251 chr20 2840447 2840447 1 + C T rs201176727 2840446 + 2840426 2840466 41 GCTGCTGCACCCTATGGGGGCCCCATTGGTATGTTGCCCCT GCTGCTGCACCCTATGGGGGCTCCATTGGTATGTTGCCCCT < 41bp 0.579511929769137 0.808115653518377 0.16211462 0.8376785 prediction 0.457207447498481 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2840446 chr20:2840447 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_115802 0 0 3 DDX24 POSTAR2 ENCODE chr20:2840436-2840452
64251 chr10 6266162 6266162 1 + C T STAD 6266161 + 6266141 6266181 41 GTGGAGTCCGTCTGCACACACCGGGAGAGGTCAGAGGTGAG GTGGAGTCCGTCTGCACACACTGGGAGAGGTCAGAGGTGAG < 41bp 0.538097364700269 0.766691995613218 0.8190012 0.3996917 prediction 0.457189261825896 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6266161 chr10:6266162 nonsynonymous SNV 0.746 4 22 hm5C_associated_SNPs_115807 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:6266141-6266173
64251 chr19 37428067 37428067 1 + C T SKCM 37428066 + 37428046 37428086 41 TAGGCTGTCAAGTCACCAAACCGGATGTGATATTCAAGTTG TAGGCTGTCAAGTCACCAAACTGGATGTGATATTCAAGTTG < 41bp 0.533189033586183 0.761776578965055 0.63580716 0.33368295 prediction 0.457175090757743 Functional Gain - ZNF568 ENSG00000198453 CDS Human protein_coding chr19:37428066 chr19:37428067 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_115811 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:37428057-37428080
64251 chr6 27783154 27783154 1 + C G LUSC 27783153 + 27783133 27783173 41 CGGGGAATTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGG CGGGGAATTGGCCAAGCACGCGGTGTCCGAGGGCACCAAGG < 41bp 0.619016072434269 0.847594248981746 0.8506063 0.9128697 prediction 0.457156353094954 Functional Gain - HIST1H2BM ENSG00000196374 CDS Human other chr6:27783153 chr6:27783154 synonymous SNV . 0 22 hm5C_associated_SNPs_115814 0 0 4 EIF3D POSTAR2 ENCODE chr6:27783103-27783168
64251 chr22 35661472 35661472 1 + C A UVM 35661471 + 35661451 35661491 41 CAGTGACATCTGGCCCTCCTCCCAGCATCCCATACGCTGGA CAGTGACATCTGGCCCTCCTCACAGCATCCCATACGCTGGA < 41bp 0.465587209441304 0.72857551613435 0.36710918 0.2831759 prediction 0.4571510322687 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35661471 chr22:35661472 nonsynonymous SNV 0.064 1 22 hm5C_associated_SNPs_115815 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:35661420-35661480
64251 chr5 109026191 109026191 1 + A G LIHC 109026188 + 109026168 109026208 41 TGGTGATTTTCTCGCTCTACCTGATGCTGGACCGGGGTCAC TGGTGATTTTCTCGCTCTACCTGGTGCTGGACCGGGGTCAC < 41bp 0.544530569599324 0.773104351384629 0.100274295 0.18399888 prediction 0.45714756357061 Functional Gain - MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109026188 chr5:109026191 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_115816 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:109026190-109026212
64251 chr16 24788401 24788401 1 + C A rs575176088 24788397 + 24788377 24788417 41 AGCAGCAGCAGCAACAGCAGCAGCCGCAGCAGCAGCAGCCA AGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCCA < 41bp 0.322450085145474 0.728569447173564 0.42456633 0.4420974 prediction 0.457138894347127 Functional Gain - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24788397 chr16:24788401 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_115817 0 0 1 SF3B1 POSTAR2 ENCODE chr16:24788384-24788415
64251 chr10 74886544 74886544 1 + A G rs17658872 74886541 + 74886521 74886561 41 GGCCCTTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCA GGCCCTTCCCTAGTGGCTCACTCGTGATTGCTTGCCATGCA < 41bp 0.492934834314362 0.728552863946078 0.26758093 0.3575561 prediction 0.457105727892155 Functional Gain - NUDT13 ENSG00000166321 CDS Human protein_coding chr10:74886541 chr10:74886544 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_115825 0 0 2 PPIG POSTAR2 ENCODE chr10:74886439-74886554
64251 chr17 58013617 58013617 1 + T G GBM 58013615 + 58013595 58013635 41 CTTCTCGTCTGGGAGCTGGTCCTGGGGACGCTGGAGAAGTT CTTCTCGTCTGGGAGCTGGTCCGGGGGACGCTGGAGAAGTT < 41bp 0.374098741553449 0.728548185074774 0.3966274 0.88896203 prediction 0.457096370149547 Functional Gain - RPS6KB1 ENSG00000108443 CDS Human protein_coding chr17:58013615 chr17:58013617 synonymous SNV . 0 23 hm5C_associated_SNPs_115827 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:58013584-58013618
64251 chr1 11333958 11333958 1 + C T SKCM 11333957 + 11333937 11333977 41 GATGACAGGACACTTGTGGACCGAATCTTGGAGCCGCAGGA GATGACAGGACACTTGTGGACTGAATCTTGGAGCCGCAGGA < 41bp 0.499706646367894 0.728547371191986 0.11168945 0.13158748 prediction 0.457094742383971 Functional Gain - UBIAD1 ENSG00000120942 CDS Human protein_coding chr1:11333957 chr1:11333958 stopgain 0.900 1 22 hm5C_associated_SNPs_115829 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:11333916-11334006
64251 chr17 19482176 19482176 1 + T A rs117319666 19482172 + 19482152 19482192 41 GCTCACCAGTTGTAGCTTGCCAGCTCCCAACACCCTTCCTG GCTCACCAGTTGTAGCTTGCCAGCACCCAACACCCTTCCTG < 41bp 0.56041512646354 0.788961254291324 0.6942923 0.31695256 prediction 0.457092255655568 Functional Gain - SLC47A1 ENSG00000262769 ncRNA_intronic Human antisense chr17:19482172 chr17:19482176 . . 0 25 hm5C_associated_SNPs_115830 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163973 chr17:19482176-19482177
64251 chr17 41570095 41570095 1 + C T STAD 41570094 + 41570074 41570114 41 AGTCGAAGCCGAGATCGAAACCGAGATCGAGACAGAGATAG AGTCGAAGCCGAGATCGAAACTGAGATCGAGACAGAGATAG < 41bp 0.518039851325098 0.746583372735465 0.15610924 0.23589921 prediction 0.457087042820734 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41570094 chr17:41570095 stopgain 0.634 1 22 hm5C_associated_SNPs_115832 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:41570077-41570134
64251 chr18 29671886 29671886 1 + C A rs114033819 29671885 + 29671865 29671905 41 ACTTCACACCCCGTGCCTCCCCGCCTCTCCTGGCTCCTCCG ACTTCACACCCCGTGCCTCCCAGCCTCTCCTGGCTCCTCCG < 41bp 0.505887636533625 0.734424396802563 0.055956423 0.22705185 prediction 0.457073520537875 Functional Gain - RNF138 ENSG00000265008 ncRNA_exonic Human antisense chr18:29671885 chr18:29671886 . . 0 22 hm5C_associated_SNPs_115835 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr18:29671879-29671905
64251 chr12 69864170 69864170 1 + A G rs221070 69864167 + 69864147 69864187 41 GCTCCCCCGGAAGTGCTTTTCCAAGATTCGGGCCGGAGAGA GCTCCCCCGGAAGTGCTTTTCCAGGATTCGGGCCGGAGAGA < 41bp 0.48855714532498 0.728519445011592 0.2985417 0.814139 prediction 0.457038890023185 Functional Gain - FRS2 ENSG00000166225 UTR5 Human protein_coding chr12:69864167 chr12:69864170 . . 0 24 hm5C_associated_SNPs_115840 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr12:69864162-69864185
64251 chr7 1027134 1027134 1 + C G HNSC 1027130 + 1027110 1027150 41 GCACGTGCCCCGCTGCACCGCGGCCGACACACAGCTGGGCG GCACGTGCCCCGCTGCACCGCGGCGGACACACAGCTGGGCG < 41bp 0.621788287451993 0.850302036364383 0.72473335 0.8371898 prediction 0.45702749782478 Functional Gain - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1027130 chr7:1027134 synonymous SNV . 0 25 hm5C_associated_SNPs_115843 0 0 1 SND1 POSTAR2 ENCODE chr7:1027102-1027140
64251 chrX 17768162 17768162 1 + C T SKCM 17768161 + 17768141 17768181 41 CAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCA CAAGGCGTGAGAATAATTCCCTGAGCAACCTTCCAAGGCCA < 41bp 0.499491138316967 0.728513128457721 0.301475 0.18445942 prediction 0.457026256915441 Functional Gain - SCML1 ENSG00000047634 CDS Human protein_coding chrX:17768161 chrX:17768162 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115844 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:17768079-17768281
64251 chr19 11145743 11145743 1 + C A COAD 11145739 + 11145719 11145759 41 GAGGAGGAGGAGAAGATGTTCGGCCGTGGCTCCCGCCACCG GAGGAGGAGGAGAAGATGTTCGGCAGTGGCTCCCGCCACCG < 41bp 0.694564006055049 0.923073089295563 0.905675 0.90442073 prediction 0.45701816648103 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11145739 chr19:11145743 nonsynonymous SNV 0.940 4 25 hm5C_associated_SNPs_115846 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11145733-11145772
64251 chr10 75549793 75549793 1 + C T COAD 75549792 + 75549772 75549812 41 TCAATACAGTGTGTGGAGCTCCGGGTGAGTGTGGTGAGAAA TCAATACAGTGTGTGGAGCTCTGGGTGAGTGTGGTGAGAAA < 41bp 0.49221260161975 0.728506203066048 0.86381143 0.69636977 prediction 0.457012406132097 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75549792 chr10:75549793 nonsynonymous SNV 0.900 3 22 hm5C_associated_SNPs_115849 0 0 4 BUD13 POSTAR2 ENCODE chr10:75549759-75549793
64251 chr19 15784427 15784427 1 + C A rs76142062 15784423 + 15784403 15784443 41 CTGCTGCTGGTTGTGGGCTCCTGGCTACTCGCCCGCATCCT CTGCTGCTGGTTGTGGGCTCCTGGATACTCGCCCGCATCCT < 41bp 0.703283980533681 0.931787366619177 0.5305486 0.86165965 prediction 0.457006772170993 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784423 chr19:15784427 nonsynonymous SNV 0.009 1 25 hm5C_associated_SNPs_115852 0 0 1 DDX3X POSTAR2 ENCODE chr19:15784344-15784448
64251 chr17 16321163 16321163 1 + C T LGG 16321162 + 16321142 16321182 41 ATAAGAGTCAACCTCAACTACCGAAAGGGAACAGGTGCCAG ATAAGAGTCAACCTCAACTACTGAAAGGGAACAGGTGCCAG < 41bp 0.561824334416102 0.790319937842067 0.10789585 0.07717574 prediction 0.456991206851928 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16321162 chr17:16321163 stopgain 0.003 0 22 hm5C_associated_SNPs_115856 0 0 1 YBX3 POSTAR2 ENCODE chr17:16321151-16321182
64251 chr19 1258042 1258042 1 + C G rs567549081 1258041 + 1258021 1258061 41 AGGGAGAGGGGAACTACCCCCCCAGCCTGCCCTCCGCCCCG AGGGAGAGGGGAACTACCCCCGCAGCCTGCCCTCCGCCCCG < 41bp 0.625168854675983 0.853660000428655 0.36521596 0.8353687 prediction 0.456982291505343 Functional Gain - MIDN ENSG00000167470 UTR3 Human protein_coding chr19:1258041 chr19:1258042 . . 0 22 hm5C_associated_SNPs_115857 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:1258031-1258067
64251 chr12 122255366 122255366 1 + C T UCEC 122255365 + 122255345 122255385 41 GCGTGGGTGTGCGGCGGCGGCCGGCGCGGCCTCTGGAGCTG GCGTGGGTGTGCGGCGGCGGCTGGCGCGGCCTCTGGAGCTG < 41bp 0.510911276384838 0.73939681615927 0.8257545 0.8135221 prediction 0.456971079548864 Functional Gain - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122255365 chr12:122255366 nonsynonymous SNV 0.067 2 22 hm5C_associated_SNPs_115859 0 0 1 EIF3H POSTAR2 ENCODE chr12:122255340-122255382
64251 chr17 78078437 78078437 1 + C A SKCM 78078433 + 78078413 78078453 41 CACCGGCTCCTGGCCGTCTGCGCCCTCGTGTCCTTGGCAAC CACCGGCTCCTGGCCGTCTGCGCCATCGTGTCCTTGGCAAC < 41bp 0.32610225549166 0.728474290844 0.14424103 0.3183087 prediction 0.456948581688001 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78078433 chr17:78078437 nonsynonymous SNV 0.005 1 25 hm5C_associated_SNPs_115862 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:78078420-78078440
64251 chr22 23653977 23653977 1 + C T SKCM 23653976 + 23653956 23653996 41 GGTGGGCATCTACCGCGTGTCCGGTGTGGCCACGGACATCC GGTGGGCATCTACCGCGTGTCTGGTGTGGCCACGGACATCC < 41bp 0.55257735590096 0.7810453937577 0.313817 0.41479945 prediction 0.45693607571348 Functional Gain - BCR ENSG00000186716 CDS Human protein_coding chr22:23653976 chr22:23653977 synonymous SNV . 0 22 hm5C_associated_SNPs_115864 0 0 1 PPIG POSTAR2 ENCODE chr22:23653967-23654021
64251 chr9 133370306 133370306 1 + C T SKCM 133370305 + 133370285 133370325 41 CCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGGGA CCGCCACTGCATCGCCAAGTCTCAGGAGCGAGTGGAAGGGA < 41bp 0.461115177533723 0.728465921805532 0.08633354 0.04486358 prediction 0.456931843611063 Functional Gain - ASS1 ENSG00000130707 CDS Human protein_coding chr9:133370305 chr9:133370306 synonymous SNV . 0 22 hm5C_associated_SNPs_115866 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:133370283-133370309
64251 chr19 3612242 3612242 1 - G T UCEC 3612246 - 3612226 3612266 41 CTTCTTCAACCGCGTGCACACGGGCTTCGAGTGGAACAAGT CTTCTTCAACCGCGTGCACACGGGATTCGAGTGGAACAAGT < 41bp 0.695629191839773 0.924093728230121 0.90820026 0.918007 prediction 0.456929072780697 Functional Gain - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612246 chr19:3612242 synonymous SNV . 0 25 hm5C_associated_SNPs_115868 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:3612220-3612246
64251 chr20 42876070 42876070 1 + C G KIRC 42876066 + 42876046 42876086 41 GGCCAAGCCAGCGGAGGCCCCCGACGCTCCCGAGGCGGCCA GGCCAAGCCAGCGGAGGCCCCCGAGGCTCCCGAGGCGGCCA < 41bp 0.447362635959045 0.728453157803222 0.20234555 0.7422001 prediction 0.456906315606444 Functional Gain - GDAP1L1 ENSG00000124194 CDS Human protein_coding chr20:42876066 chr20:42876070 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_115871 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:42876059-42876116
64251 chr17 73491637 73491637 1 + C T GBM 73491636 + 73491616 73491656 41 TTTCTCCAGGCCAAGCTGCCCCGGGGTATCCACCAAGTGCG TTTCTCCAGGCCAAGCTGCCCTGGGGTATCCACCAAGTGCG < 41bp 0.541357186452642 0.769799336917279 0.79809207 0.6097569 prediction 0.456884300929273 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73491636 chr17:73491637 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115879 0 0 1 DDX24 POSTAR2 ENCODE chr17:73491623-73491640
64251 chr19 3535930 3535930 1 + C A rs116845259 3535926 + 3535906 3535946 41 GCTTCTCTGTCTCATGCTCCCAGGCTGCACAGCAGGCAGGG GCTTCTCTGTCTCATGCTCCCAGGATGCACAGCAGGCAGGG < 41bp 0.674863995867538 0.903304491618527 0.38291416 0.77442193 prediction 0.456880991501979 Functional Gain - FZR1 ENSG00000105325 UTR3 Human protein_coding chr19:3535926 chr19:3535930 . . 0 25 hm5C_associated_SNPs_115881 0 0 1 RBM15 POSTAR2 ENCODE chr19:3535927-3535964
64251 chr19 37618097 37618097 1 + C T UCEC 37618096 + 37618076 37618116 41 CACTTATGAAACAGAATTATCCCAATGGGAAATGAGTGACA CACTTATGAAACAGAATTATCTCAATGGGAAATGAGTGACA < 41bp 0.494196962981 0.728440117852056 0.043430984 0.124106824 prediction 0.456880235704111 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618096 chr19:37618097 synonymous SNV . 0 22 hm5C_associated_SNPs_115882 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr19:37618089-37618109
64251 chr7 77326074 77326074 1 + C T rs201618374 77326073 + 77326053 77326093 41 CCCTCTGTCTGCTGCTCCCTCCCCGTCCTCTTCTCGGAGCA CCCTCTGTCTGCTGCTCCCTCTCCGTCCTCTTCTCGGAGCA < 41bp 0.535040380130387 0.763480261831129 0.09956032 0.08112183 prediction 0.456879763401483 Functional Gain - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77326073 chr7:77326074 synonymous SNV . 0 22 hm5C_associated_SNPs_115883 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr7:77326047-77326085
64251 chr8 121514792 121514792 1 + C A KIRC 121514791 + 121514771 121514811 41 AAACCAATCCTCTGGAATGGCCAGAAAGGCATGTTCTTCAA AAACCAATCCTCTGGAATGGCAAGAAAGGCATGTTCTTCAA < 41bp 0.565848784821971 0.794288555349409 0.13806364 0.17832217 prediction 0.456879541054877 Functional Gain - MTBP ENSG00000172167 CDS Human protein_coding chr8:121514791 chr8:121514792 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_115884 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:121514766-121514795
64251 chr1 28293671 28293671 1 + C T LUSC 28293670 + 28293650 28293690 41 ATTTAGCACAGAAGTTTTTCCCCAAGGCTAAGGATGAGGCT ATTTAGCACAGAAGTTTTTCCTCAAGGCTAAGGATGAGGCT < 41bp 0.548952132548154 0.777387348511028 0.33524683 0.24129882 prediction 0.456870431925748 Functional Gain - XKR8 ENSG00000158156 CDS Human protein_coding chr1:28293670 chr1:28293671 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_115885 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28293653-28293677
64251 chr19 35741388 35741388 1 + C T SKCM 35741387 + 35741367 35741407 41 CGCATCGCCGATGCCTTCTCCCCGGCCAGCGTCGACAACCA CGCATCGCCGATGCCTTCTCCTCGGCCAGCGTCGACAACCA < 41bp 0.46405293810809 0.728430601346965 0.5903077 0.8406375 prediction 0.45686120269393 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35741387 chr19:35741388 nonsynonymous SNV 0.175 2 22 hm5C_associated_SNPs_115886 0 0 2 RBM15 POSTAR2 ENCODE chr19:35741353-35741400
64251 chr8 145583579 145583579 1 + T G UCEC 145583576 + 145583556 145583596 41 TCTTGAGCCACCTGCCACCTCGCTTCTTACGGTCATTCTTC TCTTGAGCCACCTGCCACCTCGCGTCTTACGGTCATTCTTC < 41bp 0.330836803219279 0.728425340463562 0.045408428 0.1216487 prediction 0.456850680927123 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583576 chr8:145583579 nonsynonymous SNV 0.146 4 24 hm5C_associated_SNPs_115889 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145583555-145583583
64251 chr14 93282745 93282745 1 + T C HNSC 93282743 + 93282723 93282763 41 AGAAGCTGATGGGCCAGATACATCAGCTCAGATCCGAATTA AGAAGCTGATGGGCCAGATACACCAGCTCAGATCCGAATTA < 41bp 0.630220959258181 0.858641351704692 0.28079024 0.3462233 prediction 0.456840784893023 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93282743 chr14:93282745 synonymous SNV . 0 23 hm5C_associated_SNPs_115894 0 0 3 PRPF8 POSTAR2 ENCODE chr14:93282698-93282787
64251 chr11 85345229 85345229 1 + T C STAD 85345227 + 85345207 85345247 41 GACGCTGCTTCAAGGTTAAACATGATGCTTTGAAGACATAT GACGCTGCTTCAAGGTTAAACACGATGCTTTGAAGACATAT < 41bp 0.596877137281918 0.82529426657985 0.07559341 0.061986923 prediction 0.456834258595864 Functional Gain - TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85345227 chr11:85345229 synonymous SNV . 0 23 hm5C_associated_SNPs_115898 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:85345192-85345230
64251 chr14 29237197 29237197 1 + T A STAD 29237193 + 29237173 29237213 41 CGCCACAATCTGTCCCTCAACAAGTGCTTCGTGAAGGTGCC CGCCACAATCTGTCCCTCAACAAGAGCTTCGTGAAGGTGCC < 41bp 0.650845760355107 0.87925569620521 0.27611458 0.2134346 prediction 0.456819871700207 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237193 chr14:29237197 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_115903 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:29237193-29237212
64251 chr20 18576790 18576790 1 + A G UCEC 18576787 + 18576767 18576807 41 TGTCCTGAAGGGAAACAAGCCTGATTTCCACCTAGCAATGC TGTCCTGAAGGGAAACAAGCCTGGTTTCCACCTAGCAATGC < 41bp 0.531033466407115 0.75944124106735 0.072466075 0.26129097 prediction 0.456815549320469 Functional Gain - DTD1 ENSG00000125821 CDS Human protein_coding chr20:18576787 chr20:18576790 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_115906 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr20:18576790-18576791
64251 chrX 153678615 153678615 1 + C T SKCM 153678614 + 153678594 153678634 41 AGAAGAACAAGCACATCTTTCCCGCCAGCCGCTGGGAACCC AGAAGAACAAGCACATCTTTCTCGCCAGCCGCTGGGAACCC < 41bp 0.47426913657859 0.728405324503518 0.2793628 0.17872703 prediction 0.456810649007037 Functional Gain - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678614 chrX:153678615 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_115907 0 0 6 SRSF1 POSTAR2 GSE83923,GSM2221666 chrX:153678600-153678620
64251 chr20 47682942 47682942 1 + C A KIRC 47682941 + 47682921 47682961 41 TTATTGGCAGAGAAGATTTTCCACAGAAATGGCCTGACTTG TTATTGGCAGAGAAGATTTTCAACAGAAATGGCCTGACTTG < 41bp 0.480870381830382 0.728402631148531 0.07521874 0.16715744 prediction 0.456805262297063 Functional Gain - CSE1L ENSG00000124207 CDS Human protein_coding chr20:47682941 chr20:47682942 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_115909 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:47682913-47682946
64251 chr11 70189925 70189925 1 + A G SKCM 70189922 + 70189902 70189942 41 GCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCG GCTCAGTTGACCTGCTATCGCCCGGCGGGCAGGCCGACGCG < 41bp 0.559784532813007 0.7881791669356 0.21996024 0.6725104 prediction 0.456789268245185 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70189922 chr11:70189925 nonsynonymous SNV 0.118 0 24 hm5C_associated_SNPs_115911 0 0 2 FXR2 POSTAR2 ENCODE chr11:70189912-70189962
64251 chr16 56938371 56938371 1 + T C BLCA 56938369 + 56938349 56938389 41 TCCCGAGACGCTGCTCTCATCGTCATGTAAGTAGTGCCCGG TCCCGAGACGCTGCTCTCATCGCCATGTAAGTAGTGCCCGG < 41bp 0.602513826895061 0.830888324118319 0.32784507 0.86422765 prediction 0.456748994446514 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56938369 chr16:56938371 nonsynonymous SNV 0.456 2 23 hm5C_associated_SNPs_115916 0 0 1 GRWD1 POSTAR2 ENCODE chr16:56938322-56938414
64251 chr3 10319986 10319986 1 + C T UCEC 10319985 + 10319965 10320005 41 ATTGCTTCACCGGCAGCTACCCGGTCATTGAGCCCCTGCTG ATTGCTTCACCGGCAGCTACCTGGTCATTGAGCCCCTGCTG < 41bp 0.490428458018292 0.728363075513479 0.8908431 0.3955649 prediction 0.456726151026958 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10319985 chr3:10319986 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_115921 0 0 1 SF3A3 POSTAR2 ENCODE chr3:10319924-10319999
64251 chr22 50319191 50319191 1 + C T UCEC 50319190 + 50319170 50319210 41 AAACGGAAGATGCCTGTGTGCCGCCGGCAGAGGCTGGTGAG AAACGGAAGATGCCTGTGTGCTGCCGGCAGAGGCTGGTGAG < 41bp 0.503729296643803 0.732080489262949 0.35283142 0.30949777 prediction 0.456702385238293 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50319190 chr22:50319191 nonsynonymous SNV 0.002 3 22 hm5C_associated_SNPs_115926 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50319178-50319205
64251 chr18 670720 670720 1 + C A OV 670716 + 670696 670736 41 TCCTCTGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGT TCCTCTGATGGCGCTGCCTCCATGACATGCCCTCTGCCAGT < 41bp 0.310669517155686 0.728349166782112 0.29031366 0.08318424 prediction 0.456698333564224 Functional Gain - TYMS ENSG00000176890 CDS Human protein_coding chr18:670716 chr18:670720 stopgain 0.989 1 25 hm5C_associated_SNPs_115927 0 0 20 PTBP1 POSTAR2 GSE57278,GSM1378377 chr18:670620-670740
64251 chr3 50222238 50222238 1 + C T SKCM 50222237 + 50222217 50222257 41 GGGCGCTATGAGGTGCTTTTCCTGGGCACAGGTACCCACTG GGGCGCTATGAGGTGCTTTTCTTGGGCACAGGTACCCACTG < 41bp 0.535179610239751 0.76352219529821 0.8587775 0.30128258 prediction 0.456685170116919 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50222237 chr3:50222238 synonymous SNV . 0 22 hm5C_associated_SNPs_115930 0 0 1 PRPF8 POSTAR2 ENCODE chr3:50222236-50222285
64251 chr7 6063042 6063042 1 + T G UCEC 6063039 + 6063019 6063059 41 GTTTGGCCAGAAGCATAATGCTGTCAACGCAACCCTTATAG GTTTGGCCAGAAGCATAATGCTGGCAACGCAACCCTTATAG < 41bp 0.334440571577013 0.728312730742622 0.29493088 0.7650428 prediction 0.456625461485245 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063039 chr7:6063042 nonsynonymous SNV 0.710 3 24 hm5C_associated_SNPs_115936 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:6063008-6063044
64251 chr11 57464290 57464290 1 + C T rs183544157 57464289 + 57464269 57464309 41 CTACCATGTACAAGTATCGGCCGGGTTACAGTAGCAGCAGT CTACCATGTACAAGTATCGGCTGGGTTACAGTAGCAGCAGT < 41bp 0.482295352623507 0.728303137141259 0.27513605 0.2173402 prediction 0.456606274282518 Functional Gain - ZDHHC5 ENSG00000156599 CDS Human protein_coding chr11:57464289 chr11:57464290 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_115941 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:57464276-57464299
64251 chr10 75561146 75561146 1 + C T CESC 75561145 + 75561125 75561165 41 GTGAATGCGATCCGGAGTGCCCGCAGCGCCTTCTGCCTGAC GTGAATGCGATCCGGAGTGCCTGCAGCGCCTTCTGCCTGAC < 41bp 0.563246728860118 0.791547654479249 0.18256393 0.4421919 prediction 0.456601851238263 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75561145 chr10:75561146 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_115942 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:75561109-75561147
64251 chr22 42273401 42273401 1 + C T UCEC 42273400 + 42273380 42273420 41 CACCCACACTCAGGCTCTGGCCGCAGTGTCCTGTCATTCGA CACCCACACTCAGGCTCTGGCTGCAGTGTCCTGTCATTCGA < 41bp 0.58960866885677 0.817908578508056 0.25336447 0.274505 prediction 0.456599819302572 Functional Gain - SREBF2 ENSG00000198911 CDS Human protein_coding chr22:42273400 chr22:42273401 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_115943 0 0 1 FMR1 POSTAR2 ENCODE chr22:42273332-42273413
64251 chr17 1657459 1657459 1 + C G rs148395057 1657458 + 1657438 1657478 41 CCCAGACCTGCGTGGGATCTCCGAGCAGAGCCTGGTGGTGT CCCAGACCTGCGTGGGATCTCGGAGCAGAGCCTGGTGGTGT < 41bp 0.658639234337647 0.886937609267976 0.8875967 0.9279406 prediction 0.456596749860659 Functional Gain - SERPINF2 ENSG00000167711 CDS Human protein_coding chr17:1657458 chr17:1657459 synonymous SNV . 0 22 hm5C_associated_SNPs_115944 0 0 3 RPS3 POSTAR2 ENCODE chr17:1657443-1657468
64251 chr4 1346896 1346896 1 + C A UCEC 1346895 + 1346875 1346915 41 TGGTGCCTTTTGACTTTGACCCGAACCCGGAGACGGAATCC TGGTGCCTTTTGACTTTGACCAGAACCCGGAGACGGAATCC < 41bp 0.461954146212955 0.728288638647371 0.29125425 0.58137375 prediction 0.456577277294741 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1346895 chr4:1346896 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115946 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:1346880-1346900
64251 chr8 21955034 21955034 1 + C G rs190462850 21955033 + 21955013 21955053 41 GTCCCTGGCCTCAGTACCCCCCAGGCATGCGGCAGCAGGTG GTCCCTGGCCTCAGTACCCCCGAGGCATGCGGCAGCAGGTG < 41bp 0.396682704862331 0.728283237353708 0.45754156 0.8976953 prediction 0.456566474707417 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21955033 chr8:21955034 nonsynonymous SNV 0.596 4 22 hm5C_associated_SNPs_115948 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:21955026-21955053
64251 chr16 68328627 68328627 1 + C T CESC 68328626 + 68328606 68328646 41 AGGTTGTTCTTCGTGGGCTCCCGGGAGGGCCACCTACCGGA AGGTTGTTCTTCGTGGGCTCCTGGGAGGGCCACCTACCGGA < 41bp 0.551936881103889 0.780216652096885 0.9296606 0.92359364 prediction 0.456559541985993 Functional Gain - SLC7A6 ENSG00000103064 CDS Human protein_coding chr16:68328626 chr16:68328627 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_115950 0 0 1 U2AF2 POSTAR2 ENCODE chr16:68328610-68328652
64251 chr11 102220841 102220841 1 + T A UCEC 102220837 + 102220817 102220857 41 AATGACAAGGTCAAATGCTTCTGTTGTGGCCTGATGCTGGA AATGACAAGGTCAAATGCTTCTGTAGTGGCCTGATGCTGGA < 41bp 0.394237330145701 0.728260343599988 0.16376773 0.21106613 prediction 0.456520687199975 Functional Gain - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102220837 chr11:102220841 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_115958 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:102220829-102220874
64251 chr1 114515703 114515703 1 + C A THCA 114515702 + 114515682 114515722 41 AGAAGCAGCAACCCAGCCCCCCGCAGGCAGCAGGCGTTTGT AGAAGCAGCAACCCAGCCCCCAGCAGGCAGCAGGCGTTTGT < 41bp 0.482713058217138 0.728259076407685 0.19545275 0.3019477 prediction 0.456518152815371 Functional Gain - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515702 chr1:114515703 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_115959 0 0 2 IGF2BP2 POSTAR2 ENCODE chr1:114515672-114515752
64251 chr4 7056021 7056021 1 + C T HNSC 7056020 + 7056000 7056040 41 AGCAGCAGCTGGGCTACATGCCGCTGCGGGATGATTACGAG AGCAGCAGCTGGGCTACATGCTGCTGCGGGATGATTACGAG < 41bp 0.477138826243546 0.728258466525036 0.17686817 0.58304936 prediction 0.456516933050072 Functional Gain - TADA2B ENSG00000173011 CDS Human protein_coding chr4:7056020 chr4:7056021 nonsynonymous SNV 0.852 2 22 hm5C_associated_SNPs_115960 0 0 1 FMR1 POSTAR2 ENCODE chr4:7055976-7056074
64251 chr1 10659404 10659404 1 + C A UCEC 10659400 + 10659380 10659420 41 GGTGGTTCCTGTCCAGCCCCCTCACCTCATATCTCAGCCAT GGTGGTTCCTGTCCAGCCCCCTCAACTCATATCTCAGCCAT < 41bp 0.301938638109755 0.728253468982866 0.16467774 0.22952497 prediction 0.456506937965732 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10659400 chr1:10659404 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_115962 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:10659395-10659416
64251 chr4 6865421 6865421 1 + T G GBM 6865419 + 6865399 6865439 41 ACAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCA ACAGGGCTATTCGGATCTCTCCGCGGACTCACTTTCGCCCA < 41bp 0.389078574641544 0.72824747153264 0.66799927 0.9414258 prediction 0.45649494306528 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6865419 chr4:6865421 synonymous SNV . 0 23 hm5C_associated_SNPs_115965 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr4:6865390-6865435
64251 chr10 102738746 102738746 1 + C A SARC 102738745 + 102738725 102738765 41 ACTCAGAGCCGCAGCAGTCACCGTGTGGCCCGTGTGGCTCG ACTCAGAGCCGCAGCAGTCACAGTGTGGCCCGTGTGGCTCG < 41bp 0.592650900422247 0.820896288978512 0.4780957 0.8221796 prediction 0.45649077711253 Functional Gain - SEMA4G ENSG00000055950;ENSG00000095539 CDS Human other chr10:102738745 chr10:102738746 nonsynonymous SNV 0.980 3 22 hm5C_associated_SNPs_115968 0 0 2 PPIG POSTAR2 ENCODE chr10:102738732-102738775
64251 chr19 10394744 10394744 1 + C T STAD 10394743 + 10394723 10394763 41 CCCCCACAACTTGTCAGCCCCCGGGTCCTAGAGGTGGACAC CCCCCACAACTTGTCAGCCCCTGGGTCCTAGAGGTGGACAC < 41bp 0.538954504207764 0.767188387537736 0.3671779 0.5050127 prediction 0.456467766659944 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394743 chr19:10394744 nonsynonymous SNV 0.000 3 22 hm5C_associated_SNPs_115971 0 0 5 NOL12 POSTAR2 ENCODE chr19:10394735-10394786
64251 chr13 50087244 50087244 1 + C A LGG 50087243 + 50087223 50087263 41 AGGATCAGGATCCACTTAATCCTGATAGAAGTTTTGATGTG AGGATCAGGATCCACTTAATCATGATAGAAGTTTTGATGTG < 41bp 0.555735487252912 0.78396285029496 0.07607508 0.48265254 prediction 0.456454726084096 Functional Gain - PHF11;SETDB2-PHF11 ENSG00000136147 CDS Human protein_coding chr13:50087243 chr13:50087244 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_115974 0 0 1 PPIG POSTAR2 ENCODE chr13:50087193-50087303
64251 chr16 20430677 20430677 1 + C T rs186088988 20430676 + 20430656 20430696 41 AAGGGTGGATGCCATCAGTGCCGAATGCCCCTCCCTCCAGA AAGGGTGGATGCCATCAGTGCTGAATGCCCCTCCCTCCAGA < 41bp 0.551527565590101 0.779750435784332 0.0851953 0.09444451 prediction 0.456445740388463 Functional Gain - ACSM5 ENSG00000183549 CDS Human protein_coding chr16:20430676 chr16:20430677 synonymous SNV . 0 22 hm5C_associated_SNPs_115976 0 0 1 GRWD1 POSTAR2 ENCODE chr16:20430566-20430712
64251 chr19 10798340 10798340 1 + C T SKCM 10798339 + 10798319 10798359 41 ACTCGAACTCCTACAACTCTCCCGGGGGCGGGGGCGGATCC ACTCGAACTCCTACAACTCTCTCGGGGGCGGGGGCGGATCC < 41bp 0.585616560489256 0.813833875998492 0.7860376 0.5581867 prediction 0.456434631018472 Functional Gain - ILF3 ENSG00000129351 CDS Human protein_coding chr19:10798339 chr19:10798340 nonsynonymous SNV 0.037 1 22 hm5C_associated_SNPs_115978 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10798324-10798346
64251 chr5 14681702 14681702 1 + C T SKCM 14681701 + 14681681 14681721 41 CTGCCGCCCTGGCTGCAGGACCCGGAGCTCATGCTGGTACG CTGCCGCCCTGGCTGCAGGACTCGGAGCTCATGCTGGTACG < 41bp 0.471691677489341 0.728213455386982 0.34071898 0.16828439 prediction 0.456426910773964 Functional Gain - OTULIN ENSG00000154124 CDS Human protein_coding chr5:14681701 chr5:14681702 nonsynonymous SNV 0.687 0 22 hm5C_associated_SNPs_115979 0 0 6 GRWD1 POSTAR2 ENCODE chr5:14681579-14681707
64251 chr8 99158878 99158878 1 + T C UCEC 99158875 + 99158855 99158895 41 TTTATCTGGAACCAAGATATCTGTAAGAGTGTCACAGAGAA TTTATCTGGAACCAAGATATCTGCAAGAGTGTCACAGAGAA < 41bp 0.509132287657617 0.737329752715884 0.100919336 0.15135619 prediction 0.456394930116534 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99158875 chr8:99158878 synonymous SNV . 0 24 hm5C_associated_SNPs_115984 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:99158871-99158895
64251 chr17 16335393 16335393 1 + T G UCEC 16335390 + 16335370 16335410 41 AGGACGAGGGCAACGGGGCCCAGTACAGGGGTATCCTGGAA AGGACGAGGGCAACGGGGCCCAGGACAGGGGTATCCTGGAA < 41bp 0.698826153573759 0.927012686908491 0.25403026 0.56084037 prediction 0.456373066669463 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335390 chr17:16335393 nonsynonymous SNV 0.003 5 24 hm5C_associated_SNPs_115990 0 0 1 SND1 POSTAR2 ENCODE chr17:16335328-16335402
64251 chr6 151626990 151626990 1 + C A COAD 151626986 + 151626966 151627006 41 GGCCAGAAAGGAGCCCTGAACGGTCAAGGAGCCCTAAACAG GGCCAGAAAGGAGCCCTGAACGGTAAAGGAGCCCTAAACAG < 41bp 0.314539109349163 0.728176120345727 0.12890798 0.29708886 prediction 0.456352240691454 Functional Gain - AKAP12 ENSG00000131016 CDS Human protein_coding chr6:151626986 chr6:151626990 nonsynonymous SNV 0.007 0 25 hm5C_associated_SNPs_115992 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:151626983-151626996
64251 chr20 37623522 37623522 1 + A G COAD 37623519 + 37623499 37623539 41 AGCTTCAGCCACTCTGGATGCAGACGTAAGAGCCTTGCCTC AGCTTCAGCCACTCTGGATGCAGGCGTAAGAGCCTTGCCTC < 41bp 0.553917052316024 0.782091162545518 0.55424774 0.887324 prediction 0.456348220458988 Functional Gain - DHX35 ENSG00000101452 CDS Human protein_coding chr20:37623519 chr20:37623522 nonsynonymous SNV 0.815 1 24 hm5C_associated_SNPs_115993 0 0 7 U2AF2 POSTAR2 GSE61603,GSM1509288 chr20:37623520-37623540
64251 chr4 30723196 30723196 1 + T C UCEC 30723194 + 30723174 30723214 41 GCCGACGTCCGCATCGGCAACGTGGCTTCAGACCTGGGCAT GCCGACGTCCGCATCGGCAACGCGGCTTCAGACCTGGGCAT < 41bp 0.487388216936677 0.72816361032232 0.24640754 0.24159557 prediction 0.456327220644639 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30723194 chr4:30723196 nonsynonymous SNV 0.992 3 23 hm5C_associated_SNPs_115996 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:30723191-30723229
64251 chr17 37618601 37618601 1 + C T SKCM 37618600 + 37618580 37618620 41 GACATGGCCTTCAAACTAGACCGAAGGGAGAACGACGAACG GACATGGCCTTCAAACTAGACTGAAGGGAGAACGACGAACG < 41bp 0.529888839468813 0.758046066975386 0.23323077 0.19723135 prediction 0.456314455013147 Functional Gain - CDK12 ENSG00000167258 CDS Human protein_coding chr17:37618600 chr17:37618601 stopgain 0.755 1 22 hm5C_associated_SNPs_116000 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:37618518-37618603
64251 chr16 30997082 30997082 1 + C A rs150464212 30997081 + 30997061 30997101 41 ATGCTGCTGCAGCGGGAGCCCCGGCTCGGGGAGCTGCGGGT ATGCTGCTGCAGCGGGAGCCCAGGCTCGGGGAGCTGCGGGT < 41bp 0.571375419804373 0.799531990115386 0.65851325 0.8617467 prediction 0.456313140622026 Functional Gain - HSD3B7 ENSG00000099377;ENSG00000268863 CDS Human other chr16:30997081 chr16:30997082 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116001 0 0 3 DDX3X POSTAR2 ENCODE chr16:30996980-30997126
64251 chr7 100730756 100730756 1 + C T UCS 100730755 + 100730735 100730775 41 CTGGCGGATGGCGGCCGCGTCCGCTGCCCCGAGTGCCGCGA CTGGCGGATGGCGGCCGCGTCTGCTGCCCCGAGTGCCGCGA < 41bp 0.510493427835052 0.738647893854119 0.17343372 0.18498448 prediction 0.456308932038135 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730755 chr7:100730756 nonsynonymous SNV 0.203 1 22 hm5C_associated_SNPs_116002 0 0 2 FMR1 POSTAR2 ENCODE chr7:100730724-100730800
64251 chr15 80767490 80767490 1 + T G LIHC 80767487 + 80767467 80767507 41 GTCAGAGTGGTTTGGGAGCACACTGTATGAACAGGTGCATC GTCAGAGTGGTTTGGGAGCACACGGTATGAACAGGTGCATC < 41bp 0.32982984496277 0.72815319479352 0.08887434 0.08148828 prediction 0.45630638958704 Functional Gain - ARNT2 ENSG00000172379 CDS Human protein_coding chr15:80767487 chr15:80767490 nonsynonymous SNV 0.848 4 24 hm5C_associated_SNPs_116004 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr15:80767467-80767495
64251 chr9 131671134 131671134 1 + A G LGG 131671131 + 131671111 131671151 41 CAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCTGC CAAGCTGCCACAGGTGGTCACAGGTGTGGGCGTGCACCTGC < 41bp 0.556681701921786 0.784831993766804 0.8534795 0.89821553 prediction 0.456300583690036 Functional Gain - LRRC8A ENSG00000136802 CDS Human protein_coding chr9:131671131 chr9:131671134 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_116007 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:131671133-131671134
64251 chr12 119588985 119588985 1 + C T LGG 119588984 + 119588964 119589004 41 TCCCCAAATCCCAGGGCTTCCCCCAGGTACACCCAAAGCCG TCCCCAAATCCCAGGGCTTCCTCCAGGTACACCCAAAGCCG < 41bp 0.451865442086561 0.728134779430145 0.32056046 0.9585372 prediction 0.456269558860289 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119588984 chr12:119588985 nonsynonymous SNV 0.953 1 22 hm5C_associated_SNPs_116010 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119588900-119589000
64251 chr3 111637979 111637979 1 + C T BLCA 111637978 + 111637958 111637998 41 TTGGCTGCAATGGAAGAAACCCGGATAGTCATTCTGAACAA TTGGCTGCAATGGAAGAAACCTGGATAGTCATTCTGAACAA < 41bp 0.556039475253467 0.78417144533283 0.29590186 0.18664202 prediction 0.456263940158726 Functional Gain - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111637978 chr3:111637979 nonsynonymous SNV 0.494 4 22 hm5C_associated_SNPs_116014 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr3:111637920-111637980
64251 chr12 53679780 53679780 1 + A G STAD 53679777 + 53679757 53679797 41 GCAGAAGGGGAAGCAGCAGGCCCAGGTCCCCTGTCCTCCAC GCAGAAGGGGAAGCAGCAGGCCCGGGTCCCCTGTCCTCCAC < 41bp 0.543501369915217 0.771629683460551 0.06199047 0.25323898 prediction 0.456256627090667 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53679777 chr12:53679780 nonsynonymous SNV 0.053 0 24 hm5C_associated_SNPs_116016 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:53679733-53679795
64251 chr1 215759936 215759936 1 + C T BRCA 215759935 + 215759915 215759955 41 ATGCAAAGGTGGTTGGAGGGCCACATGGAGACAAAGACAAA ATGCAAAGGTGGTTGGAGGGCTACATGGAGACAAAGACAAA < 41bp 0.458230424196084 0.728114369975632 0.22995576 0.4970875 prediction 0.456228739951264 Functional Gain - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215759935 chr1:215759936 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_116021 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:215759877-215759936
64251 chr22 50615790 50615790 1 + C T STAD 50615789 + 50615769 50615809 41 TTCGAGAAGTACCTGGAGCGCCGCGGCCGCAGCAACTTCCT TTCGAGAAGTACCTGGAGCGCTGCGGCCGCAGCAACTTCCT < 41bp 0.532239700794017 0.76035253491177 0.37506518 0.34708405 prediction 0.456225668235506 Functional Gain - PANX2 ENSG00000073150 CDS Human protein_coding chr22:50615789 chr22:50615790 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_116023 0 0 1 UCHL5 POSTAR2 ENCODE chr22:50615737-50615861
64251 chr19 47712468 47712468 1 + T C STAD 47712466 + 47712446 47712486 41 AACTTCTTCTTCTTCGATGGCATGAAGGGGAATGGGATTGT AACTTCTTCTTCTTCGATGGCACGAAGGGGAATGGGATTGT < 41bp 0.601958845381462 0.83005367305501 0.20901328 0.1477274 prediction 0.456189655347097 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47712466 chr19:47712468 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_116029 0 0 20 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:47712422-47712480
64251 chr17 79966960 79966960 1 + C T LUSC 79966959 + 79966939 79966979 41 GGAGCCGGTGGTGTGCCACCCCGACCTGGAGGAGCGGCTGC GGAGCCGGTGGTGTGCCACCCTGACCTGGAGGAGCGGCTGC < 41bp 0.512518531250708 0.740605895021636 0.24047038 0.2067754 prediction 0.456174727541856 Functional Gain - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79966959 chr17:79966960 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116030 0 0 7 AARS POSTAR2 ENCODE chr17:79966941-79966989
64251 chr6 27861251 27861251 1 + C A PRAD 27861250 + 27861230 27861270 41 TCTCCTCCGCCATGCCCGACCCGGCTAAATCTGCTCCTGCC TCTCCTCCGCCATGCCCGACCAGGCTAAATCTGCTCCTGCC < 41bp 0.546885489128734 0.774967905724226 0.39472315 0.722328 prediction 0.456164833190984 Functional Gain - HIST1H2BO ENSG00000196331 CDS Human other chr6:27861250 chr6:27861251 nonsynonymous SNV 0.008 1 22 hm5C_associated_SNPs_116032 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:27861200-27861260
64251 chr3 28304843 28304843 1 + C A COAD 28304842 + 28304822 28304862 41 TAAAATAATGAGAGAAAAGGCCAAAGAGAGGTGTTCTGAAC TAAAATAATGAGAGAAAAGGCAAAAGAGAGGTGTTCTGAAC < 41bp 0.562799246626065 0.790868712218144 0.09042671 0.5242386 prediction 0.456138931184157 Functional Gain - CMC1 ENSG00000187118 CDS Human protein_coding chr3:28304842 chr3:28304843 synonymous SNV . 0 22 hm5C_associated_SNPs_116037 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:28304827-28304868
64251 chr20 25277072 25277072 1 + C A UCEC 25277071 + 25277051 25277091 41 TCGGGCAAGTTCTCCAGTGACCGGACCATCACGGAGTATGC TCGGGCAAGTTCTCCAGTGACAGGACCATCACGGAGTATGC < 41bp 0.570729756989943 0.798792818662897 0.8897991 0.90120363 prediction 0.456126123345908 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25277071 chr20:25277072 synonymous SNV . 0 22 hm5C_associated_SNPs_116041 0 0 1 PPIG POSTAR2 ENCODE chr20:25277045-25277076
64251 chr1 33235514 33235514 1 + C A LUAD 33235513 + 33235493 33235533 41 AGCGTGAGGCACCAGGCACGCCCCGGGCTCCTGGTGCACGG AGCGTGAGGCACCAGGCACGCACCGGGCTCCTGGTGCACGG < 41bp 0.553633371750329 0.781683165885672 0.19574788 0.20935711 prediction 0.456099588270686 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33235513 chr1:33235514 nonsynonymous SNV 0.003 4 22 hm5C_associated_SNPs_116045 0 0 2 METAP2 POSTAR2 ENCODE chr1:33235490-33235526
64251 chr7 193291 193291 1 + C A UCEC 193290 + 193270 193310 41 ACATCGCCCTGGACCTGCTGCCCAGGCTGGAGCGACGCGGC ACATCGCCCTGGACCTGCTGCACAGGCTGGAGCGACGCGGC < 41bp 0.471090310992522 0.72804019997255 0.18141207 0.28856987 prediction 0.456080399945099 Functional Gain - FAM20C ENSG00000177706 CDS Human protein_coding chr7:193290 chr7:193291 nonsynonymous SNV 0.326 3 22 hm5C_associated_SNPs_116049 0 0 3 DDX3X POSTAR2 ENCODE chr7:193229-193317
64251 chr2 24276784 24276784 1 + C T SKCM 24276783 + 24276763 24276803 41 TCCCTGCAGGAAGGACATTCCCCAAGAAGGGCCAAACGTGT TCCCTGCAGGAAGGACATTCCTCAAGAAGGGCCAAACGTGT < 41bp 0.580715163137839 0.808744672831049 0.021376163 0.07780278 prediction 0.456059019386419 Functional Gain - FKBP1B ENSG00000119782 CDS Human protein_coding chr2:24276783 chr2:24276784 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_116053 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:24276778-24276800
64251 chr16 1733556 1733556 1 + C A rs117348044 1733552 + 1733532 1733572 41 AGTTTGGCATCCACCTCCCCCAGCCTCCTGAGTGGACAGGG AGTTTGGCATCCACCTCCCCCAGCATCCTGAGTGGACAGGG < 41bp 0.315398989966445 0.728016076131432 0.3540304 0.41973317 prediction 0.456032152262863 Functional Gain - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1733552 chr16:1733556 nonsynonymous SNV 0.002 1 25 hm5C_associated_SNPs_116058 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:1733517-1733558
64251 chr19 11135092 11135092 1 + A G KIRP 11135089 + 11135069 11135109 41 GGCCAAGGGCGTGCTGCTGACTGATGGCTCCGAGAAGGACA GGCCAAGGGCGTGCTGCTGACTGGTGGCTCCGAGAAGGACA < 41bp 0.498418486096683 0.728014222551043 0.37139434 0.7475248 prediction 0.456028445102085 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11135089 chr19:11135092 nonsynonymous SNV 0.207 3 24 hm5C_associated_SNPs_116059 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11135028-11135100
64251 chr16 69820935 69820935 1 + C T ESCA 69820934 + 69820914 69820954 41 ATGGCATCTGCCAGCTCTAGCCGGGCAGGAGTGGCCCTGCC ATGGCATCTGCCAGCTCTAGCTGGGCAGGAGTGGCCCTGCC < 41bp 0.530866183335977 0.758880307429317 0.9067081 0.6245156 prediction 0.45602824818668 Functional Gain - WWP2 ENSG00000198373 CDS Human protein_coding chr16:69820934 chr16:69820935 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_116060 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:69820930-69820976
64251 chr17 43138747 43138747 1 + C T LIHC 43138746 + 43138726 43138766 41 AGCCGCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAAC AGCCGCCGGCACCTCCGCTGCTGCAGATGATGGAAGGGAAC < 41bp 0.530897085724508 0.758909213646905 0.45298 0.42227358 prediction 0.456024255844792 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43138746 chr17:43138747 nonsynonymous SNV 0.993 0 22 hm5C_associated_SNPs_116061 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:43138720-43138758
64251 chr20 47858706 47858706 1 + C T SKCM 47858705 + 47858685 47858725 41 GAATCGCAGAGCCAAGCGGGCCCGAGCAATGCCCGAGGAGG GAATCGCAGAGCCAAGCGGGCTCGAGCAATGCCCGAGGAGG < 41bp 0.583040287945689 0.811050208466331 0.14905837 0.1935496 prediction 0.456019841041285 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47858705 chr20:47858706 synonymous SNV . 0 22 hm5C_associated_SNPs_116063 0 0 9 AGGF1 POSTAR2 ENCODE chr20:47858619-47858719
64251 chr5 354005 354005 1 + C T UCEC 354004 + 353984 354024 41 CGCCTCAGTGTCAGTTACCTCCGGGTGAAGAGCTTCTTCCA CGCCTCAGTGTCAGTTACCTCTGGGTGAAGAGCTTCTTCCA < 41bp 0.522801556255852 0.750807064212461 0.9461834 0.9254194 prediction 0.456011015913219 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:354004 chr5:354005 nonsynonymous SNV 0.973 5 22 hm5C_associated_SNPs_116064 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:353999-354026
64251 chr5 178310427 178310427 1 + C T SKCM 178310426 + 178310406 178310446 41 AAATCCATGCTCAAGAAAATCCCCATAAATACAATCCAGGC AAATCCATGCTCAAGAAAATCTCCATAAATACAATCCAGGC < 41bp 0.582782928734149 0.810786661317066 0.034731716 0.96583325 prediction 0.456007465165832 Functional Gain - ZNF354B ENSG00000178338 CDS Human protein_coding chr5:178310426 chr5:178310427 nonsynonymous SNV 0.604 1 22 hm5C_associated_SNPs_116067 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:178310420-178310444
64251 chr11 118498962 118498962 1 + C A COAD 118498961 + 118498941 118498981 41 GCTCTCTCCCCGCTGCCCACCCGGACCACCCCAGATCCCAA GCTCTCTCCCCGCTGCCCACCAGGACCACCCCAGATCCCAA < 41bp 0.57149858890465 0.799473969069984 0.03339231 0.22172976 prediction 0.455950760330668 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118498961 chr11:118498962 synonymous SNV . 0 22 hm5C_associated_SNPs_116077 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:118498905-118498962
64251 chr1 3599704 3599704 1 + T C KIRC 3599702 + 3599682 3599722 41 GTGGGCGGAACGGATTCCAGCATGGACGTCTTCCACCTGGA GTGGGCGGAACGGATTCCAGCACGGACGTCTTCCACCTGGA < 41bp 0.545408763256659 0.773382294407539 0.5784827 0.5187977 prediction 0.455947062301761 Functional Gain - TP73 ENSG00000078900 CDS Human protein_coding chr1:3599702 chr1:3599704 nonsynonymous SNV 0.972 3 23 hm5C_associated_SNPs_116080 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:3599702-3599704
64251 chr1 76259773 76259773 1 + C T LIHC 76259772 + 76259752 76259792 41 ACTTTTTTCCCTCCTAGTTACCAGATGTATGCTACTCATGG ACTTTTTTCCCTCCTAGTTACTAGATGTATGCTACTCATGG < 41bp 0.492962806778588 0.727957650295835 0.24572152 0.23383567 prediction 0.45591530059167 Functional Gain - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76259772 chr1:76259773 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_116084 0 0 10 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:76259746-76259775
64251 chr1 27657221 27657221 1 + C T SKCM 27657220 + 27657200 27657240 41 TTTCCTCACAGGTGGTTTTTCCCCATCATCGGCCACATGGG TTTCCTCACAGGTGGTTTTTCTCCATCATCGGCCACATGGG < 41bp 0.585388375395223 0.813341638231947 0.034959495 0.9440018 prediction 0.455906525673447 Functional Gain - TMEM222 ENSG00000186501 CDS Human protein_coding chr1:27657220 chr1:27657221 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_116087 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:27657214-27657256
64251 chr17 80011903 80011903 1 + C T UCEC 80011902 + 80011882 80011922 41 GACATGTACGAGGAGATCCACCGCAAGCTCTCAGAGGCCAC GACATGTACGAGGAGATCCACTGCAAGCTCTCAGAGGCCAC < 41bp 0.584392889314512 0.81233752803238 0.05573225 0.4116819 prediction 0.455889277435735 Functional Gain - GPS1 ENSG00000169727 CDS Human protein_coding chr17:80011902 chr17:80011903 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_116092 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:80011843-80011916
64251 chr2 169713225 169713225 1 + C A LUSC 169713221 + 169713201 169713241 41 CCTGGAACGAATGCTTAAAACGTACTCCAGCACCTCCTCCT CCTGGAACGAATGCTTAAAACGTAATCCAGCACCTCCTCCT < 41bp 0.31564943895396 0.727937391898092 0.04886198 0.07414612 prediction 0.455874783796184 Functional Gain - NOSTRIN ENSG00000163072 CDS Human protein_coding chr2:169713221 chr2:169713225 stopgain 0.057 1 25 hm5C_associated_SNPs_116094 0 0 1 SF3B1 POSTAR2 ENCODE chr2:169713223-169713253
64251 chr2 209138325 209138325 1 + C A UCEC 209138324 + 209138304 209138344 41 ACAGAGAGAGCAGAAGGAGGCCAGGGAGAACAGCAGCCTTT ACAGAGAGAGCAGAAGGAGGCAAGGGAGAACAGCAGCCTTT < 41bp 0.476507602589697 0.727933215180227 0.8469196 0.84322095 prediction 0.455866430360455 Functional Gain - PIKFYVE ENSG00000115020 CDS Human protein_coding chr2:209138324 chr2:209138325 nonsynonymous SNV 0.965 1 22 hm5C_associated_SNPs_116097 0 0 2 DDX24 POSTAR2 ENCODE chr2:209138309-209138350
64251 chr1 222835412 222835412 1 + C A LUSC 222835408 + 222835388 222835428 41 CTTTCTCAAGGATCAGTGGACGGGCCTCTACCTCATCCTCG CTTTCTCAAGGATCAGTGGACGGGACTCTACCTCATCCTCG < 41bp 0.337756178862515 0.727921914871531 0.3712507 0.5074234 prediction 0.455843829743062 Functional Gain - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222835408 chr1:222835412 nonsynonymous SNV 0.757 1 25 hm5C_associated_SNPs_116102 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr1:222835398-222835419
64251 chr7 148947441 148947441 1 + C T GBM 148947440 + 148947420 148947460 41 GGAGGGGCGCACGGGGACAGCCGAGAAGAAGCTGGCTGACT GGAGGGGCGCACGGGGACAGCTGAGAAGAAGCTGGCTGACT < 41bp 0.507973060000121 0.735888062823759 0.7341249 0.5660859 prediction 0.455830005647275 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148947440 chr7:148947441 synonymous SNV . 0 22 hm5C_associated_SNPs_116104 0 0 1 YBX3 POSTAR2 ENCODE chr7:148947380-148947443
64251 chr17 78211385 78211385 1 + A G rs147201172 78211382 + 78211362 78211402 41 CCTGGAGAGCATTGCGGTGGCCAAAGCCTTCGGTAAGACGC CCTGGAGAGCATTGCGGTGGCCAGAGCCTTCGGTAAGACGC < 41bp 0.485606925126341 0.727910330380706 0.19179347 0.7962483 prediction 0.455820660761411 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78211382 chr17:78211385 nonsynonymous SNV 0.951 4 24 hm5C_associated_SNPs_116105 0 0 2 BUD13 POSTAR2 ENCODE chr17:78211340-78211388
64251 chr5 177022652 177022652 1 + A G rs4380682 177022649 + 177022629 177022669 41 GGCCGTTTGGTAGTAATCACCCAAGGGCTGGTAAAGCCCCT GGCCGTTTGGTAGTAATCACCCAGGGGCTGGTAAAGCCCCT < 41bp 0.495491536615027 0.72789549912373 0.35080653 0.78033304 prediction 0.45579099824746 Functional Gain - TMED9 ENSG00000184840 UTR3 Human protein_coding chr5:177022649 chr5:177022652 . . 0 24 hm5C_associated_SNPs_116111 0 0 17 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:177022580-177022660
64251 chr11 60609936 60609936 1 + C T STAD 60609935 + 60609915 60609955 41 GCCAGAGTACAGTCCTGAATCCCCACGATGTCAGCCGAAGC GCCAGAGTACAGTCCTGAATCTCCACGATGTCAGCCGAAGC < 41bp 0.561528334050691 0.789411163383143 0.12904683 0.8903446 prediction 0.455765658664904 Functional Gain - CCDC86 ENSG00000110104 CDS Human protein_coding chr11:60609935 chr11:60609936 synonymous SNV . 0 22 hm5C_associated_SNPs_116116 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:60609904-60609953
64251 chrX 152914704 152914704 1 + C A TGCT 152914703 + 152914683 152914723 41 ACAGGAGGCTTCAGCAGATTCCAGGCCGAGTGCCCTCACCT ACAGGAGGCTTCAGCAGATTCAAGGCCGAGTGCCCTCACCT < 41bp 0.581004164728421 0.808885015548847 0.7168923 0.7972699 prediction 0.45576170164085 Functional Gain - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914703 chrX:152914704 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_116118 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chrX:152914702-152914724
64251 chr4 1309233 1309233 1 + C A GBM 1309229 + 1309209 1309249 41 GACGAGAGCGCCAAGCTGTGCAAGCGCCGGATCGAGCACCT GACGAGAGCGCCAAGCTGTGCAAGAGCCGGATCGAGCACCT < 41bp 0.693359648784723 0.92122551797377 0.2316232 0.527947 prediction 0.455731738378094 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1309229 chr4:1309233 nonsynonymous SNV 0.948 1 25 hm5C_associated_SNPs_116121 0 0 5 GRWD1 POSTAR2 ENCODE chr4:1309185-1309246
64251 chr12 7289595 7289595 1 + C A HNSC 7289594 + 7289574 7289614 41 AGTGGGCTGGGCTCTGGGCCCCAGGACAGCCTCAGTGACCA AGTGGGCTGGGCTCTGGGCCCAAGGACAGCCTCAGTGACCA < 41bp 0.591799298565278 0.819662963991223 0.47597745 0.40291202 prediction 0.455727330851891 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7289594 chr12:7289595 nonsynonymous SNV 0.431 0 22 hm5C_associated_SNPs_116124 0 0 7 BUD13 POSTAR2 ENCODE chr12:7289580-7289608
64251 chr12 122614650 122614650 1 + C T COAD 122614649 + 122614629 122614669 41 CCGGTGGCCTGGCCCAATCCCCGGGAAATAGGTAACCCAAA CCGGTGGCCTGGCCCAATCCCTGGGAAATAGGTAACCCAAA < 41bp 0.542573005111701 0.770430251517499 0.85688174 0.42124563 prediction 0.455714492811595 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122614649 chr12:122614650 nonsynonymous SNV 0.978 4 22 hm5C_associated_SNPs_116126 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:122614587-122614650
64251 chr7 134678273 134678273 1 + C T rs186048202 134678272 + 134678252 134678292 41 TTTGGTGATCCCTTCTTCCCCCGGACTACACAGATACTATT TTTGGTGATCCCTTCTTCCCCTGGACTACACAGATACTATT < 41bp 0.538446564117979 0.766303442121071 0.18795714 0.15249518 prediction 0.455713756006184 Functional Gain - AGBL3 ENSG00000146856 CDS Human protein_coding chr7:134678272 chr7:134678273 nonsynonymous SNV 0.965 4 22 hm5C_associated_SNPs_116127 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:134678258-134678283
64251 chr11 120097687 120097687 1 + C T rs200189572 120097686 + 120097666 120097706 41 TACACCCGCCAGGAGGATGTCCGGTTCTGGCTGGAGCAAGG TACACCCGCCAGGAGGATGTCTGGTTCTGGCTGGAGCAAGG < 41bp 0.491572704047524 0.727855782499875 0.264278 0.4150069 prediction 0.455711564999751 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120097686 chr11:120097687 nonsynonymous SNV 0.969 2 22 hm5C_associated_SNPs_116128 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:120097665-120097702
64251 chrX 70444212 70444212 1 + C T STAD 70444211 + 70444191 70444231 41 CTCATCATCCGGGCCTGTGCCCGCCGAGCCCAGCGCCGCTC CTCATCATCCGGGCCTGTGCCTGCCGAGCCCAGCGCCGCTC < 41bp 0.492478496060863 0.727850944995094 0.178931 0.09463674 prediction 0.455701889990189 Functional Gain - GJB1 ENSG00000169562 CDS Human protein_coding chrX:70444211 chrX:70444212 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_116130 0 0 3 IGF2BP1 POSTAR2 ENCODE chrX:70444185-70444241
64251 chr8 90770234 90770234 1 + T G rs201245184 90770232 + 90770212 90770252 41 GCCTGAGCGCGGCGTGGGAGCCTTGGGAGCCGCCGCAGCAG GCCTGAGCGCGGCGTGGGAGCCGTGGGAGCCGCCGCAGCAG < 41bp 0.601091407647849 0.828940852677562 0.89616334 0.9061042 prediction 0.455698890059427 Functional Gain - RIPK2 ENSG00000104312 UTR5 Human protein_coding chr8:90770232 chr8:90770234 . . 0 23 hm5C_associated_SNPs_116132 0 0 3 GEMIN5 POSTAR2 ENCODE chr8:90770165-90770242
64251 chr7 150028118 150028118 1 + C A rs140450745 150028117 + 150028097 150028137 41 GAGAATGAGACCGTTGGAGCCCAGGATGACCCCCTGGCTTA GAGAATGAGACCGTTGGAGCCAAGGATGACCCCCTGGCTTA < 41bp 0.553198964853772 0.781042654897712 0.6439179 0.90530694 prediction 0.455687380087881 Functional Gain - ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150028117 chr7:150028118 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_116136 0 0 6 LIN28B POSTAR2 ENCODE chr7:150028087-150028141
64251 chr7 44842037 44842037 1 + C A rs539726282 44842036 + 44842016 44842056 41 GAGATTACAGATGTGAGCCACCGCACCCTACCTCATTTTCT GAGATTACAGATGTGAGCCACAGCACCCTACCTCATTTTCT < 41bp 0.482563885217888 0.727839718081316 0.182484 0.1853799 prediction 0.455679436162632 Functional Gain - PPIA ENSG00000196262 UTR3 Human protein_coding chr7:44842036 chr7:44842037 . . 0 22 hm5C_associated_SNPs_116139 0 0 9 CSTF2 POSTAR2 GSE37401,GSM917676 chr7:44842011-44842049
64251 chr1 117619347 117619347 1 + C T LUAD 117619346 + 117619326 117619366 41 GCCCTCCCCACCTGGTGCCTCCCCAACCCCTTCCTCGTCGT GCCCTCCCCACCTGGTGCCTCTCCAACCCCTTCCTCGTCGT < 41bp 0.445608324314072 0.727837152602171 0.0237993 0.95739394 prediction 0.455674305204342 Functional Gain - TTF2 ENSG00000116830 CDS Human protein_coding chr1:117619346 chr1:117619347 nonsynonymous SNV 0.778 4 22 hm5C_associated_SNPs_116140 0 0 2 GRWD1 POSTAR2 ENCODE chr1:117619329-117619441
64251 chr17 79671404 79671404 1 + C T SKCM 79671403 + 79671383 79671423 41 CCCAAGATACAGCAGCTGGTCCAGGACATCGCCAGCCTCAC CCCAAGATACAGCAGCTGGTCTAGGACATCGCCAGCCTCAC < 41bp 0.544903945276742 0.772732361823708 0.21079955 0.032357752 prediction 0.455656833093931 Functional Gain - MRPL12 ENSG00000183048;ENSG00000262660;ENSG00000262814 CDS Human other chr17:79671403 chr17:79671404 stopgain 1.000 0 22 hm5C_associated_SNPs_116145 0 0 16 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:79671365-79671430
64251 chr3 51978533 51978533 1 + C A COAD 51978532 + 51978512 51978552 41 GGGACCACTTTGTGTCTCACCCGGGCAAGTACACACTTATC GGGACCACTTTGTGTCTCACCAGGGCAAGTACACACTTATC < 41bp 0.587027156806643 0.81485075861285 0.85173166 0.9211068 prediction 0.455647203612414 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978532 chr3:51978533 nonsynonymous SNV 0.374 2 22 hm5C_associated_SNPs_116147 0 0 1 GRWD1 POSTAR2 ENCODE chr3:51978469-51978602
64251 chr8 56686055 56686055 1 + C G rs188303075 56686054 + 56686034 56686074 41 CCGGCGCGAGCGGCCGCGGGCCAGTTTCTATCTCCTCATCC CCGGCGCGAGCGGCCGCGGGCGAGTTTCTATCTCCTCATCC < 41bp 0.587920596610349 0.81574158764279 0.24797511 0.6193448 prediction 0.45564198206488 Functional Gain - TGS1 ENSG00000137574 UTR5 Human protein_coding chr8:56686054 chr8:56686055 . . 0 22 hm5C_associated_SNPs_116148 0 0 2 DDX3X POSTAR2 ENCODE chr8:56686009-56686063
64251 chr3 183858377 183858377 1 + C A HNSC 183858376 + 183858356 183858396 41 ACCCAGAGCTGCACTCATTCCCGGCACAACATCTACCGAGG ACCCAGAGCTGCACTCATTCCAGGCACAACATCTACCGAGG < 41bp 0.602056403026727 0.829849678127913 0.44077778 0.53655577 prediction 0.455586550202371 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858376 chr3:183858377 synonymous SNV . 0 22 hm5C_associated_SNPs_116154 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:183858355-183858378
64251 chr20 23350336 23350336 1 + A G UCEC 23350333 + 23350313 23350353 41 CCATTCATGTGCAATGCGTGCGGACGGACATTCACCGACAA CCATTCATGTGCAATGCGTGCGGGCGGACATTCACCGACAA < 41bp 0.537619589186243 0.765410518804573 0.82437783 0.92572564 prediction 0.455581859236659 Functional Gain - GZF1 ENSG00000125812 CDS Human protein_coding chr20:23350333 chr20:23350336 synonymous SNV . 0 24 hm5C_associated_SNPs_116155 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr20:23350323-23350340
64251 chr1 110586383 110586383 1 + C T READ 110586382 + 110586362 110586402 41 TCTGGAGGGGGAGACGTTTCCCCTGGAACGGGATGAAGTGA TCTGGAGGGGGAGACGTTTCCTCTGGAACGGGATGAAGTGA < 41bp 0.468161426780835 0.727782507790566 0.19273862 0.29441196 prediction 0.455565015581133 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586382 chr1:110586383 synonymous SNV . 0 22 hm5C_associated_SNPs_116157 0 0 7 GRWD1 POSTAR2 ENCODE chr1:110586317-110586470
64251 chr3 67058725 67058725 1 + C T rs114416433 67058724 + 67058704 67058744 41 GTGGATGAAAGTGTATGAGACCCCAGATCGGCTCTGGGACC GTGGATGAAAGTGTATGAGACTCCAGATCGGCTCTGGGACC < 41bp 0.564665283650697 0.792436288307127 0.38550487 0.93800807 prediction 0.45554200931286 Functional Gain - KBTBD8 ENSG00000163376 CDS Human protein_coding chr3:67058724 chr3:67058725 synonymous SNV . 0 22 hm5C_associated_SNPs_116164 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:67058707-67058733
64251 chr16 66612849 66612849 1 + C T STAD 66612848 + 66612828 66612868 41 AAGTTGAAAGGAAGCTTTCCCCCGCCAAGGACGCCTACCCC AAGTTGAAAGGAAGCTTTCCCTCGCCAAGGACGCCTACCCC < 41bp 0.515634157767155 0.743399175461331 0.4171999 0.6538724 prediction 0.455530035388352 Functional Gain - CKLF-CMTM1;CMTM1 ENSG00000089505;ENSG00000254788 CDS Human other chr16:66612848 chr16:66612849 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_116166 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:66612829-66612857
64251 chr6 3017138 3017138 1 + C T rs1130428 3017137 + 3017117 3017157 41 GGGTAAACTAGCGCTCCTTTCCGTAACCACGGGAGGCACGG GGGTAAACTAGCGCTCCTTTCTGTAACCACGGGAGGCACGG < 41bp 0.471652992123907 0.727755432234741 0.21072689 0.13834655 prediction 0.455510864469482 Functional Gain - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3017137 chr6:3017138 synonymous SNV . 0 22 hm5C_associated_SNPs_116168 0 0 3 SF3A3 POSTAR2 ENCODE chr6:3017073-3017142
64251 chr12 1893206 1893206 1 + C T rs185048932 1893205 + 1893185 1893225 41 CCTGTATGCTGCCCGGATCCCCGAACGCTTTTTCCCTGGCA CCTGTATGCTGCCCGGATCCCTGAACGCTTTTTCCCTGGCA < 41bp 0.580712910375442 0.808464907848781 0.051686257 0.044592917 prediction 0.455503994946679 Functional Gain - ADIPOR2 ENSG00000006831 CDS Human protein_coding chr12:1893205 chr12:1893206 synonymous SNV . 0 22 hm5C_associated_SNPs_116170 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:1893170-1893207
64251 chr20 6750952 6750952 1 + T C rs557734542 6750950 + 6750930 6750970 41 TTCGAGTTGCGGCTGCTCAGCATGTTCGGCCTGAAACAGAG TTCGAGTTGCGGCTGCTCAGCACGTTCGGCCTGAAACAGAG < 41bp 0.597646267075018 0.825396026504676 0.16467884 0.07619128 prediction 0.455499518859317 Functional Gain - BMP2 ENSG00000125845 CDS Human protein_coding chr20:6750950 chr20:6750952 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_116171 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:6750940-6750960
64251 chr9 139699828 139699828 1 + C T UCEC 139699827 + 139699807 139699847 41 AGTGAGGAGAAAAGAGACCTCCACAGCAGAAATGGAATACC AGTGAGGAGAAAAGAGACCTCTACAGCAGAAATGGAATACC < 41bp 0.474038495602827 0.727748879215594 0.30218744 0.79735976 prediction 0.455497758431188 Functional Gain - CCDC183 ENSG00000213213 CDS Human protein_coding chr9:139699827 chr9:139699828 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116172 0 0 2 BUD13 POSTAR2 ENCODE chr9:139699817-139699837
64251 chr1 156703827 156703827 1 + C T OV 156703826 + 156703806 156703846 41 CCAAACCAGCCCTCGTCACTCCCCACACCACGTGGTTAGGT CCAAACCAGCCCTCGTCACTCTCCACACCACGTGGTTAGGT < 41bp 0.460225984378517 0.72774827960902 0.048608214 0.87361413 prediction 0.455496559218039 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156703826 chr1:156703827 synonymous SNV . 0 22 hm5C_associated_SNPs_116173 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:156703820-156703844
64251 chr20 44048200 44048200 1 + C T SKCM 44048199 + 44048179 44048219 41 GTTCCACACCAGCTACCACTCCCAGGCAGTGCATATCCGCC GTTCCACACCAGCTACCACTCTCAGGCAGTGCATATCCGCC < 41bp 0.517390696119734 0.745132843794644 0.06782189 0.030755848 prediction 0.455484295349821 Functional Gain - PIGT ENSG00000124155 CDS Human protein_coding chr20:44048199 chr20:44048200 synonymous SNV . 0 22 hm5C_associated_SNPs_116177 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:44048191-44048217
64251 chr5 141318089 141318089 1 + C T UCEC 141318088 + 141318068 141318108 41 TCTCACCTCTTCTTGTAGCCCCGGGGCCCAGCGACCTGACA TCTCACCTCTTCTTGTAGCCCTGGGGCCCAGCGACCTGACA < 41bp 0.516199611048933 0.743922862935346 0.86495686 0.48634574 prediction 0.455446503772826 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141318088 chr5:141318089 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_116183 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:141318049-141318097
64251 chr3 52829632 52829632 1 + C G LUSC 52829631 + 52829611 52829651 41 TTTTTCAGAAACGGAGCCTCCCGGAAGGGGTAAGAACTTTC TTTTTCAGAAACGGAGCCTCCGGGAAGGGGTAAGAACTTTC < 41bp 0.650053621305444 0.877774639592098 0.37633553 0.5416916 prediction 0.455442036573308 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52829631 chr3:52829632 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_116185 0 0 8 BUD13 POSTAR2 ENCODE chr3:52829632-52829640
64251 chr16 58287928 58287928 1 + C T SKCM 58287927 + 58287907 58287947 41 AGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTG AGGCAGGCGTAGATCCAAATCTCGGACAGGTATGGACCGTG < 41bp 0.561311274108257 0.789025172901988 0.29676837 0.37727407 prediction 0.455427797587463 Functional Gain - CCDC113 ENSG00000103021 CDS Human protein_coding chr16:58287927 chr16:58287928 synonymous SNV . 0 22 hm5C_associated_SNPs_116187 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:58287902-58287930
64251 chr16 2514544 2514544 1 + C T COAD 2514543 + 2514523 2514563 41 GTCCTGATGGCTGAACTCCTCCCCCTGGTAAGCGCTGCACA GTCCTGATGGCTGAACTCCTCTCCCTGGTAAGCGCTGCACA < 41bp 0.498261469630472 0.727711412015826 0.31466183 0.87187946 prediction 0.455422824031653 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2514543 chr16:2514544 nonsynonymous SNV 0.434 4 22 hm5C_associated_SNPs_116188 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:2514520-2514550
64251 chr20 3026812 3026812 1 + C T BLCA 3026811 + 3026791 3026831 41 GCCGCAAGACCCGCCACGACCCGCTGGCCAAATCCAAGATC GCCGCAAGACCCGCCACGACCTGCTGGCCAAATCCAAGATC < 41bp 0.533872186265046 0.761562873428193 0.13334358 0.14230058 prediction 0.455381374326295 Functional Gain - MRPS26 ENSG00000125901 CDS Human protein_coding chr20:3026811 chr20:3026812 nonsynonymous SNV 0.311 1 22 hm5C_associated_SNPs_116198 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819212 chr20:3026800-3026820
64251 chrX 16859727 16859727 1 + T A LUAD 16859723 + 16859703 16859743 41 GGCGAACAGGGATTTAGCAACACCTGTGATGCAGCCCTGTA GGCGAACAGGGATTTAGCAACACCAGTGATGCAGCCCTGTA < 41bp 0.65704804695402 0.884735024740829 0.25269943 0.69065046 prediction 0.455373955573618 Functional Gain - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16859723 chrX:16859727 synonymous SNV . 0 25 hm5C_associated_SNPs_116201 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:16859701-16859728
64251 chr8 82644831 82644831 1 + C A rs201750959 82644827 + 82644807 82644847 41 CCCGGGGAGCTCCCGAGAGGCCCCCGGGATCGCTGGCCCTC CCCGGGGAGCTCCCGAGAGGCCCCAGGGATCGCTGGCCCTC < 41bp 0.433457112387224 0.727682031508138 0.3254295 0.3921245 prediction 0.455364063016276 Functional Gain - CHMP4C ENSG00000164695 UTR5 Human protein_coding chr8:82644827 chr8:82644831 . . 0 25 hm5C_associated_SNPs_116202 0 0 1 DDX3X POSTAR2 ENCODE chr8:82644739-82644849
64251 chr10 5782190 5782190 1 + C A STAD 5782189 + 5782169 5782209 41 CCAGGAATGGGACAAAAAGCCCTGAAGCAGCAACCCCAGTG CCAGGAATGGGACAAAAAGCCATGAAGCAGCAACCCCAGTG < 41bp 0.468213303938783 0.727678769059597 0.39775628 0.5953602 prediction 0.455357538119193 Functional Gain - FAM208B ENSG00000108021 CDS Human protein_coding chr10:5782189 chr10:5782190 nonsynonymous SNV 0.803 3 22 hm5C_associated_SNPs_116203 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr10:5782174-5782198
64251 chr7 141478836 141478836 1 + T G PRAD 141478834 + 141478814 141478854 41 TCTTTAGTGGTTTCTTTGGTCTTGAGCTCATCTCTCCAGTT TCTTTAGTGGTTTCTTTGGTCTGGAGCTCATCTCTCCAGTT < 41bp 0.65616755602349 0.883843221681865 0.022761822 0.07202509 prediction 0.45535133131675 Functional Gain - TAS2R4 ENSG00000127364 CDS Human protein_coding chr7:141478834 chr7:141478836 nonsynonymous SNV 0.736 3 23 hm5C_associated_SNPs_116204 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr7:141478817-141478884
64251 chr3 9952706 9952706 1 + A G rs279572 9952703 + 9952683 9952723 41 TGCAAAGACCTCCCGAATGCCACAGCTCGAGAGTCAGATGG TGCAAAGACCTCCCGAATGCCACGGCTCGAGAGTCAGATGG < 41bp 0.528746069222736 0.756417038824836 0.055238098 0.07683945 prediction 0.4553419392042 Functional Gain - IL17RE ENSG00000163701 CDS Human protein_coding chr3:9952703 chr3:9952706 synonymous SNV . 0 24 hm5C_associated_SNPs_116208 0 0 3 GRWD1 POSTAR2 ENCODE chr3:9952604-9952710
64251 chr11 126276855 126276855 1 + C T SKCM 126276854 + 126276834 126276874 41 CCAGTTTTTATTTTCCCATCCCAGAGAAGAAGGAGCCGTGC CCAGTTTTTATTTTCCCATCCTAGAGAAGAAGGAGCCGTGC < 41bp 0.471390038849936 0.727653124615691 0.9048695 0.3891052 prediction 0.455306249231382 Functional Gain - ST3GAL4 ENSG00000110080 CDS Human protein_coding chr11:126276854 chr11:126276855 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_116215 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003589 chr11:126276834-126276855
64251 chr14 24770858 24770858 1 + T A UCEC 24770854 + 24770834 24770874 41 AGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTCCCTGAAA AGCTCAGGAATGTAAGCCAGCTGAATTTGAAGTCCCTGAAA < 41bp 0.395997339700029 0.727649791690174 0.11807528 0.2888325 prediction 0.455299583380348 Functional Gain - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24770854 chr14:24770858 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_116217 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24770832-24770870
64251 chr10 71392657 71392657 1 + C A UCEC 71392653 + 71392633 71392673 41 TCCCCCTTCAATGACCTCAACCGGCAGCTGGTGAACATGGG TCCCCCTTCAATGACCTCAACCGGAAGCTGGTGAACATGGG < 41bp 0.320201925226798 0.727646281633811 0.20194855 0.42618915 prediction 0.455292563267622 Functional Gain - C10orf35 ENSG00000171224 CDS Human protein_coding chr10:71392653 chr10:71392657 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_116218 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:71392621-71392665
64251 chr22 40343171 40343171 1 + A G UCEC 40343168 + 40343148 40343188 41 GTGAGGATGAACTGAGCTTTCACACTGGAGATGTTTTGAAG GTGAGGATGAACTGAGCTTTCACGCTGGAGATGTTTTGAAG < 41bp 0.491388447217859 0.727645871377726 0.2552907 0.32695773 prediction 0.455291742755452 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40343168 chr22:40343171 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_116219 0 0 1 PRPF8 POSTAR2 ENCODE chr22:40343152-40343232
64251 chr16 30016644 30016644 1 + C A rs201487520 30016643 + 30016623 30016663 41 ACCCTGACCCCCCTCCCACCCCCTAAGATGCCCCCCCCCAC ACCCTGACCCCCCTCCCACCCACTAAGATGCCCCCCCCCAC < 41bp 0.567834452087644 0.795470294909885 0.113209724 0.15660742 prediction 0.455271685644482 Functional Gain - INO80E ENSG00000169592 CDS Human protein_coding chr16:30016643 chr16:30016644 nonsynonymous SNV 0.111 0 22 hm5C_associated_SNPs_116221 0 0 1 XPO5 POSTAR2 ENCODE chr16:30016598-30016646
64251 chr1 46733194 46733194 1 + C T COAD 46733193 + 46733173 46733213 41 CTGGACAGCTTGAACACCAGCCGGCGGGTGCTCATCTCCGG CTGGACAGCTTGAACACCAGCTGGCGGGTGCTCATCTCCGG < 41bp 0.478315083058853 0.727634646447676 0.15751114 0.16917804 prediction 0.455269292895351 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46733193 chr1:46733194 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_116222 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:46733114-46733205
64251 chr19 1254983 1254983 1 + C A LIHC 1254982 + 1254962 1255002 41 CCCCAGGGGCCAGCCCTGCCCCCCGCTCCCGAAAACCCGGC CCCCAGGGGCCAGCCCTGCCCACCGCTCCCGAAAACCCGGC < 41bp 0.466692436156893 0.727634617422297 0.12670332 0.11935264 prediction 0.455269234844595 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254982 chr19:1254983 nonsynonymous SNV 0.431 1 22 hm5C_associated_SNPs_116223 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1254954-1254992
64251 chr6 52268720 52268720 1 + C T rs140488811 52268719 + 52268699 52268739 41 CACCGTGTGGCGCTCTGTCACCTGGCTGGCTGCCAGGAGCA CACCGTGTGGCGCTCTGTCACTTGGCTGGCTGCCAGGAGCA < 41bp 0.538971476574261 0.766605917012 0.30403155 0.19886193 prediction 0.455268880875478 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268719 chr6:52268720 synonymous SNV . 0 22 hm5C_associated_SNPs_116224 0 0 1 YBX3 POSTAR2 ENCODE chr6:52268687-52268758
64251 chr11 63676485 63676485 1 + C T SKCM 63676484 + 63676464 63676504 41 AACGAGATGATGCGGGAGATCCGCAAGGTGCTGGACGCGAA AACGAGATGATGCGGGAGATCTGCAAGGTGCTGGACGCGAA < 41bp 0.579588093412888 0.807218667162389 0.5943166 0.87475514 prediction 0.455261147499001 Functional Gain - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63676484 chr11:63676485 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_116228 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:63676463-63676505
64251 chr6 5086131 5086131 1 + C G MESO 5086127 + 5086107 5086147 41 AAGCGGGTGCAGTTCGCGGACACGCTGGGGCTAAGCCTGGC AAGCGGGTGCAGTTCGCGGACACGGTGGGGCTAAGCCTGGC < 41bp 0.614013927815044 0.841641259131452 0.5101508 0.7315477 prediction 0.455254662632816 Functional Gain - PPP1R3G ENSG00000219607 CDS Human protein_coding chr6:5086127 chr6:5086131 nonsynonymous SNV 0.469 3 25 hm5C_associated_SNPs_116231 0 0 1 RBM22 POSTAR2 ENCODE chr6:5086037-5086144
64251 chr2 241987826 241987826 1 + C T HNSC 241987825 + 241987805 241987845 41 GGGCTACGTGTGCGAGTGCCCCGAAGGCTTCATGGGCCTGG GGGCTACGTGTGCGAGTGCCCTGAAGGCTTCATGGGCCTGG < 41bp 0.484567511244908 0.727611475636321 0.57700545 0.40944222 prediction 0.455222951272642 Functional Gain - SNED1 ENSG00000162804 CDS Human protein_coding chr2:241987825 chr2:241987826 synonymous SNV . 0 22 hm5C_associated_SNPs_116236 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:241987820-241987840
64251 chr4 184431719 184431719 1 + C G SKCM 184431718 + 184431698 184431738 41 GAAAGATCTTCAAGAAGACCCCGCAGGCAGCGGACCAGTGA GAAAGATCTTCAAGAAGACCCGGCAGGCAGCGGACCAGTGA < 41bp 0.652367318916725 0.879969921176319 0.026925683 0.25296304 prediction 0.455205204519188 Functional Gain - ING2 ENSG00000168556 CDS Human protein_coding chr4:184431718 chr4:184431719 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_116239 0 0 2 ZNF622 POSTAR2 ENCODE chr4:184431657-184431722
64251 chr1 6648369 6648369 1 + C G rs143591275 6648368 + 6648348 6648388 41 CAAGCACAACCGCACCCACACCGGGGAAAGGCCCTTCAGTT CAAGCACAACCGCACCCACACGGGGGAAAGGCCCTTCAGTT < 41bp 0.660840293528055 0.888440597959329 0.8641044 0.9094565 prediction 0.455200608862549 Functional Gain - ZBTB48 ENSG00000204859 CDS Human protein_coding chr1:6648368 chr1:6648369 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116242 0 0 3 EFTUD2 POSTAR2 ENCODE chr1:6648261-6648372
64251 chr4 74274465 74274465 1 + C T SKCM 74274464 + 74274444 74274484 41 ACCTCCCCCGATTGGTGAGACCAGAGGTTGATGTGATGTGC ACCTCCCCCGATTGGTGAGACTAGAGGTTGATGTGATGTGC < 41bp 0.544445250787884 0.772038232647554 0.18564308 0.051477432 prediction 0.455185963719341 Functional Gain - ALB ENSG00000163631 CDS Human protein_coding chr4:74274464 chr4:74274465 nonsynonymous SNV 0.060 3 22 hm5C_associated_SNPs_116243 0 0 5 DHX30 POSTAR2 ENCODE chr4:74274451-74274485
64251 chr2 23916248 23916248 1 + C T UCEC 23916247 + 23916227 23916267 41 CTTCGCGCTGCAGATCTTCCCCGAGGTGGCCGCCCAGGAGG CTTCGCGCTGCAGATCTTCCCTGAGGTGGCCGCCCAGGAGG < 41bp 0.542680128753273 0.770266494175996 0.47299698 0.2276369 prediction 0.455172730845446 Functional Gain - KLHL29 ENSG00000119771 CDS Human protein_coding chr2:23916247 chr2:23916248 synonymous SNV . 0 22 hm5C_associated_SNPs_116250 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:23916228-23916249
64251 chr7 137776536 137776536 1 + C A LUAD 137776535 + 137776515 137776555 41 TATGGGCTACAAATCATGTCCCAGAGATGGTCCGCCCAACC TATGGGCTACAAATCATGTCCAAGAGATGGTCCGCCCAACC < 41bp 0.477357786299705 0.72758331663774 0.22964996 0.22018942 prediction 0.45516663327548 Functional Gain - AKR1D1 ENSG00000122787 CDS Human protein_coding chr7:137776535 chr7:137776536 nonsynonymous SNV 0.012 4 22 hm5C_associated_SNPs_116251 0 0 1 GRWD1 POSTAR2 ENCODE chr7:137776513-137776637
64251 chr18 59992591 59992591 1 + C G rs35589394 59992590 + 59992570 59992610 41 CAGCCTGTCCCGCGCCATGGCCCCGCGCGCCCGGCGGCGCC CAGCCTGTCCCGCGCCATGGCGCCGCGCGCCCGGCGGCGCC < 41bp 0.640937885166404 0.868516907361041 0.22240275 0.5295951 prediction 0.455158044389274 Functional Gain - TNFRSF11A ENSG00000141655 CDS Human protein_coding chr18:59992590 chr18:59992591 synonymous SNV . 0 22 hm5C_associated_SNPs_116252 3 0 2 DDX3X POSTAR2 ENCODE chr18:59992563-59992661
64251 chr10 75864999 75864999 1 + C T STAD 75864998 + 75864978 75865018 41 TAAGAGGGAGGTGGAGAATTCCGAGGATCCCAAGTTCCGTG TAAGAGGGAGGTGGAGAATTCTGAGGATCCCAAGTTCCGTG < 41bp 0.538460038397529 0.766038671432409 0.7978246 0.18343702 prediction 0.455157266069761 Functional Gain - VCL ENSG00000035403 CDS Human protein_coding chr10:75864998 chr10:75864999 synonymous SNV . 0 22 hm5C_associated_SNPs_116253 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr10:75864993-75865005
64251 chr3 17131373 17131373 1 + C T SKCM 17131372 + 17131352 17131392 41 GCCGGAGCTTGGAAGTCATACCCGAAAAAGCAAACGATGAA GCCGGAGCTTGGAAGTCATACTCGAAAAAGCAAACGATGAA < 41bp 0.555311246409877 0.782889142879351 0.16170019 0.5066064 prediction 0.455155792938949 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17131372 chr3:17131373 nonsynonymous SNV 0.841 3 22 hm5C_associated_SNPs_116254 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:17131339-17131377
64251 chr17 53828793 53828793 1 + C G rs56851766 53828789 + 53828769 53828809 41 GGGGCGGTGCCTCCAAGTGACTGCCGTGCAGATCCAGGGGA GGGGCGGTGCCTCCAAGTGACTGCGGTGCAGATCCAGGGGA < 41bp 0.435793562677975 0.727572014999193 0.12114611 0.38515627 prediction 0.455144029998386 Functional Gain - PCTP ENSG00000141179 UTR5 Human protein_coding chr17:53828789 chr17:53828793 . . 0 25 hm5C_associated_SNPs_116257 0 0 1 LIN28B POSTAR2 ENCODE chr17:53828756-53828838
64251 chr2 241569874 241569874 1 + A G rs61734452 241569871 + 241569851 241569891 41 TCTGCTTCAGGAGCACCCGGCACAATTTCAACTCCATGGCG TCTGCTTCAGGAGCACCCGGCACGATTTCAACTCCATGGCG < 41bp 0.585321239926085 0.81288825195459 0.096194506 0.23657098 prediction 0.455134024057009 Functional Gain - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569871 chr2:241569874 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_116260 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:241569863-241569888
64251 chr9 115234395 115234395 1 + T G rs117134091 115234392 + 115234372 115234412 41 AAGTGAACTTAAAAATAGGACAGTTTCAACAAGTCAGGAGA AAGTGAACTTAAAAATAGGACAGGTTCAACAAGTCAGGAGA < 41bp 0.400514897289148 0.727557553136715 0.118908405 0.31223357 prediction 0.455115106273431 Functional Gain - HSDL2 ENSG00000119471 UTR3 Human protein_coding chr9:115234392 chr9:115234395 . . 0 24 hm5C_associated_SNPs_116262 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:115234381-115234409
64251 chr20 39721181 39721181 1 + C A COAD 39721180 + 39721160 39721200 41 ACATAAAGGTCCAGTATTTGCCCCACCATATGAGCCTCTTC ACATAAAGGTCCAGTATTTGCACCACCATATGAGCCTCTTC < 41bp 0.557036079107055 0.78459242185672 0.017587036 0.020753145 prediction 0.455112685499331 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39721180 chr20:39721181 synonymous SNV . 0 22 hm5C_associated_SNPs_116263 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:39721149-39721224
64251 chr17 4798486 4798486 1 + C T UCEC 4798485 + 4798465 4798505 41 CACAGTGAGACCCCTGAGATCCGGAAGTACAAGAAGCGATT CACAGTGAGACCCCTGAGATCTGGAAGTACAAGAAGCGATT < 41bp 0.467231100534362 0.727550495303205 0.8898864 0.4887197 prediction 0.45510099060641 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4798485 chr17:4798486 nonsynonymous SNV 0.869 4 22 hm5C_associated_SNPs_116265 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4798485-4798523
64251 chr17 34165489 34165489 1 + C A LIHC 34165488 + 34165468 34165508 41 CAGACAAGGACACAGGAAAGCCAAAGGGGGAGGCAACAGTG CAGACAAGGACACAGGAAAGCAAAAGGGGGAGGCAACAGTG < 41bp 0.468836758845805 0.727538101341521 0.17863056 0.16144493 prediction 0.455076202683043 Functional Gain - TAF15 ENSG00000172660 CDS Human other chr17:34165488 chr17:34165489 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_116269 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:34165429-34165489
64251 chr9 112899196 112899196 1 + C T GBM 112899195 + 112899175 112899215 41 AAGGAGAGGAGAGAGCTCATCCGCAGCCAGGCCGTCAAGAA AAGGAGAGGAGAGAGCTCATCTGCAGCCAGGCCGTCAAGAA < 41bp 0.589704214239483 0.817238064879653 0.18608353 0.21599677 prediction 0.455067701280341 Functional Gain - AKAP2;PALM2-AKAP2 ENSG00000157654;ENSG00000241978 CDS Human other chr9:112899195 chr9:112899196 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_116271 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:112899187-112899200
64251 chr1 45079884 45079884 1 + C T SKCM 45079883 + 45079863 45079903 41 GACAGCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGCT GACAGCCAGGCCCCAATTTGCTCCATCTGCCAGGTCCTGCT < 41bp 0.608804151095516 0.836330169936063 0.2789505 0.90538275 prediction 0.455052037681094 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45079883 chr1:45079884 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_116274 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:45079867-45079905
64251 chr1 95616939 95616939 1 + T C LIHC 95616937 + 95616917 95616957 41 GTGACAAATTTTTTATAATGCATCATTGTGCGTCCCTGTAT GTGACAAATTTTTTATAATGCACCATTGTGCGTCCCTGTAT < 41bp 0.435954356285951 0.727520124109522 0.020910501 0.007486582 prediction 0.455040248219045 Functional Gain - TMEM56;TMEM56-RWDD3 ENSG00000152078;ENSG00000271092 CDS Human other chr1:95616937 chr1:95616939 synonymous SNV . 0 23 hm5C_associated_SNPs_116278 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:95616918-95616939
64251 chr6 35393805 35393805 1 + C G UVM 35393804 + 35393784 35393824 41 GCGGATCAAGAAGACCGAAACCGAGACCTCGCTGCACCCTC GCGGATCAAGAAGACCGAAACGGAGACCTCGCTGCACCCTC < 41bp 0.41833418951435 0.727516269922667 0.82530415 0.9243648 prediction 0.455032539845334 Functional Gain - PPARD ENSG00000112033 CDS Human protein_coding chr6:35393804 chr6:35393805 synonymous SNV . 0 22 hm5C_associated_SNPs_116279 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:35393805-35393843
64251 chr11 74545757 74545757 1 + T C STAD 74545754 + 74545734 74545774 41 AAGGTGGAAAGGAGTCAGAGCTGTAGTGACACAGCCCAGGA AAGGTGGAAAGGAGTCAGAGCTGCAGTGACACAGCCCAGGA < 41bp 0.521926499314022 0.749439142959208 0.122449726 0.11967474 prediction 0.455025287290372 Functional Gain - RNF169 ENSG00000166439 CDS Human protein_coding chr11:74545754 chr11:74545757 synonymous SNV . 0 24 hm5C_associated_SNPs_116281 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:74545756-74545774
64251 chr12 6955994 6955994 1 - G T COAD 6955995 - 6955975 6956015 41 CCATCCCGTCAGCTGTGACTCCCAGGCAGCTCACCCTGTTA CCATCCCGTCAGCTGTGACTCACAGGCAGCTCACCCTGTTA < 41bp 0.571440779378398 0.798952407042288 0.06837258 0.09674075 prediction 0.45502325532778 Functional Gain - CDCA3;GNB3 ENSG00000111664;ENSG00000111665 CDS Human other chr12:6955995 chr12:6955994 stopgain 0.989 1 22 hm5C_associated_SNPs_116284 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:6955976-6955996
64251 chr3 50252140 50252140 1 + T C STAD 50252138 + 50252118 50252158 41 TTCAACCTCAGCAATGCCATCATGGGCAGCGGCATCCTGGG TTCAACCTCAGCAATGCCATCACGGGCAGCGGCATCCTGGG < 41bp 0.461715091876832 0.72750076285394 0.8620161 0.8537998 prediction 0.45500152570788 Functional Gain - SLC38A3 ENSG00000188338 ncRNA_exonic Human protein_coding chr3:50252138 chr3:50252140 . 1.000 2 23 hm5C_associated_SNPs_116287 0 0 1 PPIG POSTAR2 ENCODE chr3:50252137-50252176
64251 chr8 145162159 145162159 1 + C G rs567767009 145162155 + 145162135 145162175 41 CTGCCCAAGGCCATACCTGCCTAGCCCTTTGGCTCCATCCT CTGCCCAAGGCCATACCTGCCTAGGCCTTTGGCTCCATCCT < 41bp 0.430959445338669 0.72749338568644 0.037766248 0.2740252 prediction 0.454986771372879 Functional Gain - MAF1 ENSG00000179632 UTR3 Human protein_coding chr8:145162155 chr8:145162159 . . 0 25 hm5C_associated_SNPs_116290 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:145162140-145162200
64251 chr10 18829648 18829648 1 + T A rs189039831 18829644 + 18829624 18829664 41 GAGCCGGAACTCGCTATATGCACGTGTGTGTGTCCGTATGT GAGCCGGAACTCGCTATATGCACGAGTGTGTGTCCGTATGT < 41bp 0.554229574642249 0.781721918233846 0.26093706 0.22493157 prediction 0.454984687183194 Functional Gain - CACNB2 ENSG00000240291 ncRNA_intronic Human antisense chr10:18829644 chr10:18829648 . . 0 25 hm5C_associated_SNPs_116291 1 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:18829636-18829724
64251 chr14 24617532 24617532 1 + C T COAD 24617531 + 24617511 24617551 41 ACCAGATGGGTTGAGCTTCCCCGAAGGGCAGGAGGAGCCAG ACCAGATGGGTTGAGCTTCCCTGAAGGGCAGGAGGAGCCAG < 41bp 0.566549251951144 0.794040222684634 0.13760799 0.08500469 prediction 0.454981941466981 Functional Gain - RNF31 ENSG00000092098 CDS Human protein_coding chr14:24617531 chr14:24617532 synonymous SNV . 0 22 hm5C_associated_SNPs_116292 0 0 7 DDX55 POSTAR2 ENCODE chr14:24617457-24617545
64251 chr17 7162177 7162177 1 + T C UCEC 7162175 + 7162155 7162195 41 CAACTCATTTGACCTTTAACCTTCACCTGTCCAAGAAAGAG CAACTCATTTGACCTTTAACCTCCACCTGTCCAAGAAAGAG < 41bp 0.444406216648805 0.727487918968408 0.020629227 0.75343585 prediction 0.454975837936815 Functional Gain - ELP5 ENSG00000170291 CDS Human protein_coding chr17:7162175 chr17:7162177 synonymous SNV . 0 23 hm5C_associated_SNPs_116293 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7162148-7162183
64251 chr2 86709196 86709196 1 + C A UCEC 86709195 + 86709175 86709215 41 AACAACAATTCTGGTTTCCTCCGGAATCTCTTGAATTCTTC AACAACAATTCTGGTTTCCTCAGGAATCTCTTGAATTCTTC < 41bp 0.466682291782837 0.727486580312791 0.2228213 0.7803255 prediction 0.454973160625583 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86709195 chr2:86709196 synonymous SNV . 0 22 hm5C_associated_SNPs_116295 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:86709173-86709205
64251 chr20 30193293 30193293 1 + C G LUSC 30193289 + 30193269 30193309 41 GGTGCGGGCGAGGTGGTGCGCTGTCTGTCTGAGCAGAGCGT GGTGCGGGCGAGGTGGTGCGCTGTGTGTCTGAGCAGAGCGT < 41bp 0.596052755741735 0.823536795410466 0.07677084 0.08799347 prediction 0.454968079337461 Functional Gain - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193289 chr20:30193293 nonsynonymous SNV 0.851 4 25 hm5C_associated_SNPs_116298 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:30193265-30193295
64251 chr2 105687792 105687792 1 + C T SKCM 105687791 + 105687771 105687811 41 AGAGCTATTGCTTACCTTTTCCCAAGTGGTTTGTTTGAGAA AGAGCTATTGCTTACCTTTTCTCAAGTGGTTTGTTTGAGAA < 41bp 0.583940638209115 0.811409904112442 0.11832687 0.28932866 prediction 0.454938531806654 Functional Gain - MRPS9 ENSG00000135972 CDS Human protein_coding chr2:105687791 chr2:105687792 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_116301 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:105687776-105687814
64251 chr3 16336431 16336431 1 + T A UCEC 16336427 + 16336407 16336447 41 CAATATGCTCCAGTCCCAGACTGCTAGAACAAGAGAGAGTG CAATATGCTCCAGTCCCAGACTGCAAGAACAAGAGAGAGTG < 41bp 0.371232507668868 0.727465605711099 0.05416119 0.11887315 prediction 0.454931211422199 Functional Gain - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16336427 chr3:16336431 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_116304 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:16336405-16336435
64251 chr15 41794329 41794329 1 + C T UCEC 41794328 + 41794308 41794348 41 CGCAGCGCGCCGTCACCAAGCCGCGCTACATGCAGTGGCGG CGCAGCGCGCCGTCACCAAGCTGCGCTACATGCAGTGGCGG < 41bp 0.486225034941832 0.727462287754451 0.49320227 0.29800677 prediction 0.454924575508903 Functional Gain - ITPKA ENSG00000137825 CDS Human protein_coding chr15:41794328 chr15:41794329 nonsynonymous SNV 0.915 3 22 hm5C_associated_SNPs_116305 0 0 1 LIN28B POSTAR2 ENCODE chr15:41794276-41794339
64251 chr3 112300027 112300027 1 + C G BLCA 112300023 + 112300003 112300043 41 TCTGTCCTGGTCTTTGACTTCAGGCCCTCCCTGGAATTTTT TCTGTCCTGGTCTTTGACTTCAGGGCCTCCCTGGAATTTTT < 41bp 0.558338385138567 0.785793339287004 0.20886377 0.5278364 prediction 0.454909908296875 Functional Gain - SLC35A5 ENSG00000138459 CDS Human protein_coding chr3:112300023 chr3:112300027 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_116308 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:112300012-112300035
64251 chr5 162898382 162898382 1 + A G SKCM 162898379 + 162898359 162898399 41 TGTTGTGTAGGGTATGATGGCTAAGCAAGAAGGCATGGAGA TGTTGTGTAGGGTATGATGGCTAGGCAAGAAGGCATGGAGA < 41bp 0.535018407862252 0.762472329886319 0.06993833 0.15824622 prediction 0.454907844048135 Functional Gain - HMMR ENSG00000072571 CDS Human protein_coding chr5:162898379 chr5:162898382 nonsynonymous SNV 0.926 3 24 hm5C_associated_SNPs_116309 0 0 1 UCHL5 POSTAR2 ENCODE chr5:162898373-162898429
64251 chr22 21801047 21801047 1 + C A rs149083531 21801043 + 21801023 21801063 41 CCCCTCCTAGAAGCCAAAGACCCGCGGGCGCCCTCTGCCAC CCCCTCCTAGAAGCCAAAGACCCGAGGGCGCCCTCTGCCAC < 41bp 0.323315878972762 0.727440238978843 0.17916295 0.18020001 prediction 0.454880477957685 Functional Gain - HIC2 ENSG00000169635 UTR3 Human protein_coding chr22:21801043 chr22:21801047 . . 0 25 hm5C_associated_SNPs_116317 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:21801035-21801073
64251 chr17 57754422 57754422 1 + C T LIHC 57754421 + 57754401 57754441 41 ACATAGACAGTAATAACAACCCGGAGAGATTTCTTCGTGAA ACATAGACAGTAATAACAACCTGGAGAGATTTCTTCGTGAA < 41bp 0.574627382336287 0.802063480421054 0.29243428 0.25680578 prediction 0.454872196169534 Functional Gain - CLTC ENSG00000141367 CDS Human protein_coding chr17:57754421 chr17:57754422 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_116319 0 0 24 FMR1 POSTAR2 GSE39682,GSM977615 chr17:57754318-57754550
64251 chr6 4892450 4892450 1 + A G UCEC 4892447 + 4892427 4892467 41 GTCGAGCAGGGTCAGGAGGACACAGTGGCACCCGAAGTGGC GTCGAGCAGGGTCAGGAGGACACGGTGGCACCCGAAGTGGC < 41bp 0.547794718832212 0.775226050273602 0.28506052 0.6978815 prediction 0.454862662882778 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892447 chr6:4892450 synonymous SNV . 0 24 hm5C_associated_SNPs_116321 0 0 7 GRWD1 POSTAR2 ENCODE chr6:4892351-4892481
64251 chr8 91031161 91031161 1 + C T COAD 91031160 + 91031140 91031180 41 GATGGATGTTTTGAAAGCTACCGCAGAACAAATTTCTTCTC GATGGATGTTTTGAAAGCTACTGCAGAACAAATTTCTTCTC < 41bp 0.471630167044561 0.727421928528615 0.08280483 0.13687491 prediction 0.454843857057229 Functional Gain - DECR1 ENSG00000104325 CDS Human protein_coding chr8:91031160 chr8:91031161 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116324 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:91031144-91031169
64251 chr2 75119173 75119173 1 + C G rs28384369 75119172 + 75119152 75119192 41 GGCAGGGACAGAGATGGAGGCCGAGCCAATAGACTGAAGAG GGCAGGGACAGAGATGGAGGCGGAGCCAATAGACTGAAGAG < 41bp 0.430786109578711 0.727412475614841 0.3724177 0.7900846 prediction 0.454824951229682 Functional Gain - HK2 ENSG00000159399 UTR3 Human protein_coding chr2:75119172 chr2:75119173 . . 0 22 hm5C_associated_SNPs_116327 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:75119142-75119176
64251 chr12 31244703 31244703 1 + C T LIHC 31244702 + 31244682 31244722 41 GCATGCGGCCACTCGGCAGGCCGCGGGCATCCGGCTGCAGG GCATGCGGCCACTCGGCAGGCTGCGGGCATCCGGCTGCAGG < 41bp 0.542363273931741 0.769766946264289 0.82897234 0.84506977 prediction 0.454807344665097 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31244702 chr12:31244703 synonymous SNV . 0 22 hm5C_associated_SNPs_116332 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:31244679-31244721
64251 chr1 244852603 244852603 1 + C T SKCM 244852602 + 244852582 244852622 41 TTCTGGAATATTTGAAATTTCCCCAGGAAATGCTTCTGAAC TTCTGGAATATTTGAAATTTCTCCAGGAAATGCTTCTGAAC < 41bp 0.594571850951689 0.821975358879598 0.13644546 0.9280301 prediction 0.454807015855818 Functional Gain - DESI2 ENSG00000121644 CDS Human protein_coding chr1:244852602 chr1:244852603 synonymous SNV . 0 22 hm5C_associated_SNPs_116333 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:244852595-244852632
64251 chr22 29445931 29445931 1 + A G COAD 29445928 + 29445908 29445948 41 ACGGGAGCTGCTCCACCTTCCGCAGCTCCCTCAGCAGCGAC ACGGGAGCTGCTCCACCTTCCGCGGCTCCCTCAGCAGCGAC < 41bp 0.563957807614286 0.791345252228222 0.34674904 0.8248297 prediction 0.454774889227873 Functional Gain - ZNRF3 ENSG00000183579 CDS Human protein_coding chr22:29445928 chr22:29445931 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_116337 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:29445906-29445967
64251 chr3 52824844 52824844 1 + C T rs200827836 52824843 + 52824823 52824863 41 ACCTTTGAGGTTGTTTTGCACCGAGTGTGGAAGGGGAGCTC ACCTTTGAGGTTGTTTTGCACTGAGTGTGGAAGGGGAGCTC < 41bp 0.554367315797884 0.781750837204028 0.17039385 0.11707464 prediction 0.454767042812289 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52824843 chr3:52824844 stopgain 0.623 1 22 hm5C_associated_SNPs_116339 0 0 3 GRWD1 POSTAR2 ENCODE chr3:52824836-52824932
64251 chr16 68279354 68279354 1 + C G OV 68279350 + 68279330 68279370 41 ATGGGCCTCCACCTCCGCCCCTACCGTGTGGGGCTGCTCCC ATGGGCCTCCACCTCCGCCCCTACGGTGTGGGGCTGCTCCC < 41bp 0.428082711068917 0.727377129722542 0.14713573 0.26310253 prediction 0.454754259445083 Functional Gain - PLA2G15 ENSG00000103066 CDS Human protein_coding chr16:68279350 chr16:68279354 nonsynonymous SNV 0.001 2 25 hm5C_associated_SNPs_116344 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:68279354-68279355
64251 chr17 73809956 73809956 1 + C T UCEC 73809955 + 73809935 73809975 41 CACCGAGCAGCAGTTCCACCCCGAGGTGGGCCCCACAGCAG CACCGAGCAGCAGTTCCACCCTGAGGTGGGCCCCACAGCAG < 41bp 0.554064611362732 0.781420675295343 0.7794707 0.33417508 prediction 0.454712127865221 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73809955 chr17:73809956 synonymous SNV . 0 22 hm5C_associated_SNPs_116350 0 0 1 PRPF8 POSTAR2 ENCODE chr17:73809952-73810044
64251 chr1 160323960 160323960 1 + T G LIHC 160323957 + 160323937 160323977 41 GAGTGGTGCTGGTGTCCCTGCTGTCATCCTCAGGAGGCCAA GAGTGGTGCTGGTGTCCCTGCTGGCATCCTCAGGAGGCCAA < 41bp 0.326790360927644 0.727353777327577 0.089092195 0.27291396 prediction 0.454707554655154 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160323957 chr1:160323960 nonsynonymous SNV 0.380 4 24 hm5C_associated_SNPs_116352 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:160323934-160323976
64251 chr19 47856336 47856336 1 + C T rs12984558 47856335 + 47856315 47856355 41 AGGGATCGCCGAGACCACCACCGGGCTCCCAGCGAGGAAGA AGGGATCGCCGAGACCACCACTGGGCTCCCAGCGAGGAAGA < 41bp 0.549460177979098 0.776806558550154 0.7358815 0.4235382 prediction 0.454692761142113 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47856335 chr19:47856336 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_116357 0 0 2 EIF3H POSTAR2 ENCODE chr19:47856292-47856369
64251 chr21 47971611 47971611 1 + C T SKCM 47971610 + 47971590 47971630 41 GAAGAGAATCGCTCAGGCTTCCGGGAGAGAGCTCGCCCACC GAAGAGAATCGCTCAGGCTTCTGGGAGAGAGCTCGCCCACC < 41bp 0.525765827419355 0.75310472597259 0.90774244 0.76948786 prediction 0.45467779710647 Functional Gain - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47971610 chr21:47971611 synonymous SNV . 0 22 hm5C_associated_SNPs_116361 0 0 6 GRWD1 POSTAR2 ENCODE chr21:47971567-47971634
64251 chr19 45971860 45971860 1 + C A UCEC 45971859 + 45971839 45971879 41 AGGGAAATGTTTCAGGCTTTCCCCGGAGACTACGACTCCGG AGGGAAATGTTTCAGGCTTTCACCGGAGACTACGACTCCGG < 41bp 0.546253819261992 0.77359170426775 0.18764901 0.18751809 prediction 0.454675770011516 Functional Gain - FOSB ENSG00000125740 CDS Human protein_coding chr19:45971859 chr19:45971860 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_116362 0 0 1 RBM15 POSTAR2 ENCODE chr19:45971854-45971902
64251 chr6 7246994 7246994 1 + C G rs187908583 7246990 + 7246970 7247010 41 GGCGGAGGGCGACGGCGAGGCAGGCGCCGGGGGCGCGGCCT GGCGGAGGGCGACGGCGAGGCAGGGGCCGGGGGCGCGGCCT < 41bp 0.621402571574068 0.848735812134855 0.9088224 0.915864 prediction 0.454666481121574 Functional Gain - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7246990 chr6:7246994 synonymous SNV 0.008 0 25 hm5C_associated_SNPs_116366 0 0 6 DDX6 POSTAR2 ENCODE chr6:7246964-7247008
64251 chr7 6630046 6630046 1 + C G rs146606811 6630045 + 6630025 6630065 41 GCCCATCGTGGACAAGGGCCCCGTGGAGCTGCTGGAGGAGT GCCCATCGTGGACAAGGGCCCGGTGGAGCTGCTGGAGGAGT < 41bp 0.41061489348638 0.727329012299436 0.1132884 0.42650393 prediction 0.454658024598872 Functional Gain - C7orf26 ENSG00000146576 CDS Human protein_coding chr7:6630045 chr7:6630046 synonymous SNV . 0 22 hm5C_associated_SNPs_116369 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:6630045-6630046
64251 chr7 2409304 2409304 1 + C T SKCM 2409303 + 2409283 2409323 41 GTGTGAAAGTAGATAGGACTCCGAAAGGCACCCAGGTATGT GTGTGAAAGTAGATAGGACTCTGAAAGGCACCCAGGTATGT < 41bp 0.471185473672511 0.727327642135613 0.20110938 0.15030852 prediction 0.454655284271226 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2409303 chr7:2409304 nonsynonymous SNV 0.782 2 22 hm5C_associated_SNPs_116370 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2409106-2409318
64251 chr14 59112933 59112933 1 + C T SKCM 59112932 + 59112912 59112952 41 CCCTGCTGTCTACAGCTTTCCCCGTGGAAGAGAGGCCTGCC CCCTGCTGTCTACAGCTTTCCTCGTGGAAGAGAGGCCTGCC < 41bp 0.481770998084203 0.72732553293061 0.21291366 0.36123544 prediction 0.45465106586122 Functional Gain - DACT1 ENSG00000165617 CDS Human protein_coding chr14:59112932 chr14:59112933 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_116371 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr14:59112932-59112933
64251 chr3 147131182 147131182 1 + C A LUSC 147131178 + 147131158 147131198 41 GCAGGGCTCGCAGCCTTCGCCGGCCGCCAGCTCTGGCTACG GCAGGGCTCGCAGCCTTCGCCGGCAGCCAGCTCTGGCTACG < 41bp 0.702467929627681 0.929790152636924 0.70034516 0.86131144 prediction 0.454644446018487 Functional Gain - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147131178 chr3:147131182 synonymous SNV . 0 25 hm5C_associated_SNPs_116374 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr3:147131176-147131222
64251 chr17 18001661 18001661 1 + T G UCEC 18001659 + 18001639 18001679 41 TCACCACTCTGACGTGTATTCCTGGGGTCATTGAAGTAAGT TCACCACTCTGACGTGTATTCCGGGGGTCATTGAAGTAAGT < 41bp 0.362421128687563 0.727305380123398 0.4149091 0.9082334 prediction 0.454610760246797 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18001659 chr17:18001661 synonymous SNV . 0 23 hm5C_associated_SNPs_116379 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:18001634-18001675
64251 chr3 41266982 41266982 1 + T C UCEC 41266980 + 41266960 41267000 41 GCTCGTTGTACCGCTGGGACCTTGCATAACCTTTCCCATCA GCTCGTTGTACCGCTGGGACCTCGCATAACCTTTCCCATCA < 41bp 0.440890357371513 0.727301489812699 0.19258928 0.18826678 prediction 0.454602979625399 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266980 chr3:41266982 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_116380 0 0 26 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41266892-41267041
64251 chr19 35557191 35557191 1 + A G UCEC 35557188 + 35557168 35557208 41 AGCGGCATGGTGACCCAGCTCTGACCGGTGGCTTCTCGCTG AGCGGCATGGTGACCCAGCTCTGGCCGGTGGCTTCTCGCTG < 41bp 0.556429749511011 0.783728842468586 0.04234627 0.12648427 prediction 0.454598185915151 Functional Gain - HPN ENSG00000105707 CDS Human protein_coding chr19:35557188 chr19:35557191 stoploss 0.635 0 24 hm5C_associated_SNPs_116381 0 0 2 DDX55 POSTAR2 ENCODE chr19:35557161-35557248
64251 chr19 34884917 34884917 1 + C A UCEC 34884913 + 34884893 34884933 41 CAACTGCTTTGGGTGTGAGACACACGCCATGCTGCCCTATG CAACTGCTTTGGGTGTGAGACACAAGCCATGCTGCCCTATG < 41bp 0.308165882114386 0.727294082962113 0.070267916 0.16825429 prediction 0.454588165924227 Functional Gain - GPI ENSG00000105220 CDS Human protein_coding chr19:34884913 chr19:34884917 nonsynonymous SNV 0.126 1 25 hm5C_associated_SNPs_116383 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:34884873-34884920
64251 chr19 49646100 49646100 1 + C T STAD 49646099 + 49646079 49646119 41 GCCTGGTATGTGGCCGCCTGCCGGGCCAATGTCAAGAGCGG GCCTGGTATGTGGCCGCCTGCTGGGCCAATGTCAAGAGCGG < 41bp 0.525505771699008 0.752792853337236 0.353639 0.2150521 prediction 0.454574163276456 Functional Gain - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49646099 chr19:49646100 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_116384 0 0 2 EIF3H POSTAR2 ENCODE chr19:49646061-49646158
64251 chr1 112309296 112309296 1 + C A COAD 112309295 + 112309275 112309315 41 CTTCAGATTGCAGACTGAAGCCCAGGAAGATGATTGGTATG CTTCAGATTGCAGACTGAAGCACAGGAAGATGATTGGTATG < 41bp 0.468762277752165 0.727286096531881 0.120014906 0.22437131 prediction 0.454572193063762 Functional Gain - DDX20 ENSG00000064703 CDS Human protein_coding chr1:112309295 chr1:112309296 synonymous SNV . 0 22 hm5C_associated_SNPs_116385 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr1:112309274-112309297
64251 chr16 77225452 77225452 1 + C T SKCM 77225451 + 77225431 77225471 41 GACTTGGAGGACACGCAGTTCCCCAGTGAGGAAGCTAGAGA GACTTGGAGGACACGCAGTTCTCCAGTGAGGAAGCTAGAGA < 41bp 0.570288398874666 0.797560549048085 0.2506142 0.9336639 prediction 0.454544300346838 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77225451 chr16:77225452 nonsynonymous SNV 0.832 0 22 hm5C_associated_SNPs_116392 0 0 5 BUD13 POSTAR2 ENCODE chr16:77225392-77225531
64251 chr19 50550200 50550200 1 + A G LUSC 50550197 + 50550177 50550217 41 GTGCCCATCTCAACCAGCACCTGAGAGTTCACACCCAGGAG GTGCCCATCTCAACCAGCACCTGGGAGTTCACACCCAGGAG < 41bp 0.471730953052764 0.727269918119592 0.17076445 0.36178616 prediction 0.454539836239184 Functional Gain - ZNF473 ENSG00000142528 CDS Human protein_coding chr19:50550197 chr19:50550200 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_116393 0 0 2 RBM15 POSTAR2 ENCODE chr19:50550165-50550209
64251 chr9 131733151 131733151 1 + C A OV 131733150 + 131733130 131733170 41 GAAGAGACAAGCAGTGTGGTCCGGAAGATAGGTGGCACAGC GAAGAGACAAGCAGTGTGGTCAGGAAGATAGGTGGCACAGC < 41bp 0.585599083419391 0.812864906047994 0.609189 0.8834025 prediction 0.454531645257207 Functional Gain - NUP188 ENSG00000095319 CDS Human protein_coding chr9:131733150 chr9:131733151 synonymous SNV . 0 22 hm5C_associated_SNPs_116397 0 0 4 FMR1 POSTAR2 ENCODE chr9:131733151-131733182
64251 chrX 152037544 152037544 1 + C T SKCM 152037543 + 152037523 152037563 41 GTCGCACTGGCTGGCACATTCCACTACTACAGCTGCGAGAG GTCGCACTGGCTGGCACATTCTACTACTACAGCTGCGAGAG < 41bp 0.478777797392507 0.727263440543286 0.05191335 0.05188495 prediction 0.454526881086573 Functional Gain - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152037543 chrX:152037544 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_116399 0 0 7 IGF2BP1 POSTAR2 GSE21578,GSM545206 chrX:152037519-152037551
64251 chr4 1800986 1800986 1 + C A LGG 1800985 + 1800965 1801005 41 CCCATCTTCCCCACAGAAGTCCCGGGCCCAGAGCCCGGCCA CCCATCTTCCCCACAGAAGTCACGGGCCCAGAGCCCGGCCA < 41bp 0.578286495473283 0.805545007019646 0.83408844 0.8566741 prediction 0.454517023092726 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1800985 chr4:1800986 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_116402 0 0 5 BUD13 POSTAR2 ENCODE chr4:1800975-1801004
64251 chr1 248059229 248059229 1 + T A LUAD 248059225 + 248059205 248059245 41 GTCTGGGTGGTGTGGAGTGCCTGCTTCTGGCTGTCATGGCC GTCTGGGTGGTGTGGAGTGCCTGCATCTGGCTGTCATGGCC < 41bp 0.657668410012446 0.884912750089705 0.090477645 0.496651 prediction 0.454488680154517 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059225 chr1:248059229 nonsynonymous SNV 0.992 3 25 hm5C_associated_SNPs_116405 0 0 2 NONO POSTAR2 ENCODE chr1:248059214-248059271
64251 chr20 47853046 47853046 1 + A G rs144893277 47853043 + 47853023 47853063 41 GTGAAGGCCAGGATACTTCCCCAAGGTGAGCAGGCACCCCT GTGAAGGCCAGGATACTTCCCCAGGGTGAGCAGGCACCCCT < 41bp 0.552291385805936 0.779532158840691 0.8744915 0.9107816 prediction 0.45448154606951 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47853043 chr20:47853046 synonymous SNV . 0 24 hm5C_associated_SNPs_116407 0 0 4 PPIG POSTAR2 ENCODE chr20:47853015-47853047
64251 chr1 3352347 3352347 1 + T A rs1537405 3352343 + 3352323 3352363 41 ACAATCGTCTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACT ACAATCGTCTCTGTGGGTGCCGGGAGGTCCAGGCTTGCACT < 41bp 0.564893051700305 0.79213168866795 0.86349815 0.9074919 prediction 0.45447727393529 Functional Gain - PRDM16 ENSG00000142611 UTR3 Human protein_coding chr1:3352343 chr1:3352347 . . 0 25 hm5C_associated_SNPs_116408 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:3352315-3352360
64251 chr5 140589944 140589944 1 + T A BLCA 140589940 + 140589920 140589960 41 GGCACCAACGCCCAGGTCAACTACTCGCTGCTGCCGTCCCA GGCACCAACGCCCAGGTCAACTACACGCTGCTGCCGTCCCA < 41bp 0.655552054875458 0.882786637499429 0.36594987 0.70240855 prediction 0.454469165247942 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589940 chr5:140589944 nonsynonymous SNV 0.491 3 25 hm5C_associated_SNPs_116410 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr6 4937824 4937824 1 + T C SKCM 4937821 + 4937801 4937841 41 AATGAGAGAAGTCCAGAGTGCTCTGAGCACGGCCGCTGCCG AATGAGAGAAGTCCAGAGTGCTCCGAGCACGGCCGCTGCCG < 41bp 0.503123203644469 0.730357216956121 0.300228 0.29120326 prediction 0.454468026623305 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4937821 chr6:4937824 nonsynonymous SNV 0.938 4 24 hm5C_associated_SNPs_116411 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:4937801-4937827
64251 chr7 5632701 5632701 1 + T A UCEC 5632697 + 5632677 5632717 41 CCAGCAGCCTGAAGAAGAAGCAGATCTGGACGCTGGAGCAG CCAGCAGCCTGAAGAAGAAGCAGAACTGGACGCTGGAGCAG < 41bp 0.639368691745567 0.866601495186859 0.5338523 0.54309076 prediction 0.454465606882583 Functional Gain - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5632697 chr7:5632701 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_116413 0 0 9 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr7:5632693-5632724
64251 chr7 140404670 140404670 1 + C T rs557664551 140404669 + 140404649 140404689 41 GTTGTCACCAGGGTCACTTTCCGTATCCTGATCCTTCCCAG GTTGTCACCAGGGTCACTTTCTGTATCCTGATCCTTCCCAG < 41bp 0.486851963535194 0.727228953656707 0.20535678 0.25947928 prediction 0.454457907313414 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140404669 chr7:140404670 nonsynonymous SNV 0.894 1 22 hm5C_associated_SNPs_116415 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:140404660-140404680
64251 chr3 32933231 32933231 1 + C T BLCA 32933230 + 32933210 32933250 41 TGGGCAGATGGACCGCCCTTCCGGCATCGCCATCACCCCCG TGGGCAGATGGACCGCCCTTCTGGCATCGCCATCACCCCCG < 41bp 0.512078959112084 0.739296827738826 0.8247645 0.5749109 prediction 0.454435737253485 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32933230 chr3:32933231 synonymous SNV . 0 22 hm5C_associated_SNPs_116418 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:32933208-32933258
64251 chr15 68582377 68582377 1 + C A LUAD 68582373 + 68582353 68582393 41 GATGACGCCATTGAAAGTAGCTGCCGAAAGCTGTAAAGCTG GATGACGCCATTGAAAGTAGCTGCAGAAAGCTGTAAAGCTG < 41bp 0.305192546786188 0.727215940802097 0.06873119 0.077198595 prediction 0.454431881604193 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68582373 chr15:68582377 synonymous SNV . 0 25 hm5C_associated_SNPs_116420 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr15:68582341-68582378
64251 chr8 98656962 98656962 1 + C G rs201534103 98656961 + 98656941 98656981 41 CGGCTGGGCCGCGGCTTGCGCCGGCGCCCGCAAAAAGCGGA CGGCTGGGCCGCGGCTTGCGCGGGCGCCCGCAAAAAGCGGA < 41bp 0.638860638356471 0.866064635463518 0.71811426 0.9165243 prediction 0.454407994214094 Functional Gain - MTDH ENSG00000147649 CDS Human protein_coding chr8:98656961 chr8:98656962 synonymous SNV . 0 22 hm5C_associated_SNPs_116421 0 0 18 BUD13 POSTAR2 ENCODE chr8:98656908-98657016
64251 chr7 128454863 128454863 1 + C T rs201403112 128454862 + 128454842 128454882 41 CCTTCTGTTGTCAAAGAAGCCCGGGGGAAGAATGCTAATAA CCTTCTGTTGTCAAAGAAGCCTGGGGGAAGAATGCTAATAA < 41bp 0.548024710219265 0.775210409085848 0.76851356 0.53472 prediction 0.454371397733166 Functional Gain - CCDC136 ENSG00000128596 CDS Human protein_coding chr7:128454862 chr7:128454863 nonsynonymous SNV 0.241 1 22 hm5C_associated_SNPs_116424 0 0 1 SLTM POSTAR2 ENCODE chr7:128454754-128454873
64251 chr3 44906642 44906642 1 + C T SKCM 44906641 + 44906621 44906661 41 CCACAGGAAGCTCCCACCCACCTGGAAGCCCCTTCCACACA CCACAGGAAGCTCCCACCCACTTGGAAGCCCCTTCCACACA < 41bp 0.529777653627151 0.756962877343544 0.03862551 0.02317682 prediction 0.454370447432787 Functional Gain - TMEM42 ENSG00000169964 CDS Human protein_coding chr3:44906641 chr3:44906642 synonymous SNV . 0 22 hm5C_associated_SNPs_116425 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:44906591-44906643
64251 chr19 7745784 7745784 1 + C A rs117867584 7745780 + 7745760 7745800 41 TCCTGGTGAGACCCTACCCACCCCCCTGCCCGCGCCGGGCC TCCTGGTGAGACCCTACCCACCCCACTGCCCGCGCCGGGCC < 41bp 0.370114521019923 0.727183884511102 0.03547883 0.029851884 prediction 0.454367769022205 Functional Gain - TRAPPC5 ENSG00000181029 UTR5 Human protein_coding chr19:7745780 chr19:7745784 . . 0 25 hm5C_associated_SNPs_116426 0 0 4 BUD13 POSTAR2 ENCODE chr19:7745768-7745914
64251 chr14 105958575 105958575 1 + C G BRCA 105958574 + 105958554 105958594 41 GCTCTGTCCTGGCTCTTGGCCCGAGGACCTGTGCCCGAGCA GCTCTGTCCTGGCTCTTGGCCGGAGGACCTGTGCCCGAGCA < 41bp 0.646739089554258 0.873921638544404 0.7514291 0.9091364 prediction 0.454365097980292 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958574 chr14:105958575 nonsynonymous SNV 0.961 1 22 hm5C_associated_SNPs_116427 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:105958575-105958576
64251 chr8 144358795 144358795 1 + A G UCEC 144358792 + 144358772 144358812 41 TCATCGAGCACCAGCGCATCCACACTGGCGAGAAGCCCTAC TCATCGAGCACCAGCGCATCCACGCTGGCGAGAAGCCCTAC < 41bp 0.528900517677583 0.756080629751806 0.16976276 0.13667846 prediction 0.454360224148447 Functional Gain - GLI4 ENSG00000250571 CDS Human protein_coding chr8:144358792 chr8:144358795 nonsynonymous SNV 0.919 3 24 hm5C_associated_SNPs_116428 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:144358794-144358834
64251 chr13 34392272 34392272 1 + C A rs368066565 34392268 + 34392248 34392288 41 TGCGTTGTGGGGAGGACGCGCGCTCGCGCGGGATTTTCAAG TGCGTTGTGGGGAGGACGCGCGCTAGCGCGGGATTTTCAAG < 41bp 0.386392312885392 0.727175450386153 0.23767129 0.24836713 prediction 0.454350900772306 Functional Gain - RFC3 ENSG00000133119 UTR5 Human protein_coding chr13:34392268 chr13:34392272 . . 0 25 hm5C_associated_SNPs_116433 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:34392251-34392279
64251 chr17 28706343 28706343 1 + C A rs189835367 28706339 + 28706319 28706359 41 CCCTGAGGGCGACGCGGGGCCTGACGCTGCCGGGCCCGACG CCCTGAGGGCGACGCGGGGCCTGAAGCTGCCGGGCCCGACG < 41bp 0.690815935755821 0.917980824726393 0.5246685 0.80856436 prediction 0.454329777941145 Functional Gain - CPD ENSG00000108582 CDS Human protein_coding chr17:28706339 chr17:28706343 nonsynonymous SNV 0.447 0 25 hm5C_associated_SNPs_116435 0 0 3 RPS3 POSTAR2 ENCODE chr17:28706321-28706387
64251 chr1 193117044 193117044 1 + A G BLCA 193117041 + 193117021 193117061 41 ATTCTTCAATCTGTAAAAGCCAGAGAAGAAGGGCGTGCACC ATTCTTCAATCTGTAAAAGCCAGGGAAGAAGGGCGTGCACC < 41bp 0.504637871602387 0.731794127232254 0.67403233 0.7924236 prediction 0.454312511259734 Functional Gain - CDC73 ENSG00000134371 CDS Human protein_coding chr1:193117041 chr1:193117044 synonymous SNV . 0 24 hm5C_associated_SNPs_116438 0 0 4 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:193117040-193117060
64251 chr11 64854476 64854476 1 + C T UCEC 64854475 + 64854455 64854495 41 CTACAGCCAGGCCCCCCGGCCCCCAGCTTCCCCAGGCCGGC CTACAGCCAGGCCCCCCGGCCTCCAGCTTCCCCAGGCCGGC < 41bp 0.608577997009338 0.835732440786992 0.3647372 0.90622616 prediction 0.454308887555308 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64854475 chr11:64854476 synonymous SNV . 0 22 hm5C_associated_SNPs_116441 0 0 1 RPS3 POSTAR2 ENCODE chr11:64854439-64854485
64251 chr4 122734520 122734520 1 + A G UCEC 122734517 + 122734497 122734537 41 AGAAGAAATCATTGCTGAAGCAGAACCTCCTTCAGAAGTGT AGAAGAAATCATTGCTGAAGCAGGACCTCCTTCAGAAGTGT < 41bp 0.511148393038692 0.738301952501016 0.29049155 0.39632386 prediction 0.454307118924648 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122734517 chr4:122734520 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_116442 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr4:122734514-122734536
64251 chr14 74961595 74961595 1 + C A rs184167807 74961594 + 74961574 74961614 41 CTTGGCCTTCGTGAAAGGGGCCCAGGTGGACTTCAGCCAAG CTTGGCCTTCGTGAAAGGGGCACAGGTGGACTTCAGCCAAG < 41bp 0.475402693297189 0.72714223974941 0.30468333 0.51662964 prediction 0.45428447949882 Functional Gain - ISCA2 ENSG00000165898 CDS Human protein_coding chr14:74961594 chr14:74961595 synonymous SNV . 0 22 hm5C_associated_SNPs_116445 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:74961583-74961606
64251 chr20 44576249 44576249 1 + C G rs200149076 44576248 + 44576228 44576268 41 TTGCCAAGTGGGCGCCGACGCCTGAACGGCTGCAGGAGCTG TTGCCAAGTGGGCGCCGACGCGTGAACGGCTGCAGGAGCTG < 41bp 0.648268766366788 0.875384662791802 0.14173973 0.33864158 prediction 0.454231792850028 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44576248 chr20:44576249 nonsynonymous SNV 0.862 1 22 hm5C_associated_SNPs_116454 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:44576230-44576262
64251 chr12 131356638 131356638 1 + C T rs147215193 131356637 + 131356617 131356657 41 CGCTTCCGCCATCTTTCCAGCCTCAGTCGGACGGGCGCGGA CGCTTCCGCCATCTTTCCAGCTTCAGTCGGACGGGCGCGGA < 41bp 0.504186570559883 0.731291073977306 0.18119001 0.24226907 prediction 0.454209006834847 Functional Gain - RAN ENSG00000132341 CDS Human protein_coding chr12:131356637 chr12:131356638 synonymous SNV . 0 22 hm5C_associated_SNPs_116460 0 0 32 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:131356580-131356660
64251 chr17 7762832 7762832 1 + C T rs62059715 7762831 + 7762811 7762851 41 ACCCTGGAAGAGAATGGGATCCGGGATGAGGAGGAAGAATT ACCCTGGAAGAGAATGGGATCTGGGATGAGGAGGAAGAATT < 41bp 0.502825099506942 0.729924007427045 0.7738239 0.3927181 prediction 0.454197815840206 Functional Gain - CYB5D1 ENSG00000182224 CDS Human protein_coding chr17:7762831 chr17:7762832 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_116463 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7762814-7762863
64251 chr19 35510163 35510163 1 + C A STAD 35510162 + 35510142 35510182 41 CGGGTGCTGACGTACACCATCCCCATCAGCAACCCACTGGG CGGGTGCTGACGTACACCATCACCATCAGCAACCCACTGGG < 41bp 0.580960025573573 0.808056442877464 0.0478653 0.06274283 prediction 0.454192834607783 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510162 chr19:35510163 nonsynonymous SNV 0.978 3 22 hm5C_associated_SNPs_116466 0 0 2 METAP2 POSTAR2 ENCODE chr19:35510095-35510200
64251 chr3 150128657 150128657 1 + C T SKCM 150128656 + 150128636 150128676 41 ACGCCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCCGTG ACGCCGTGGTGCCCGGAGTTCTAAACGTGCCTGCAGCCGTG < 41bp 0.52309431923827 0.750172260354368 0.39242986 0.42112356 prediction 0.454155882232196 Functional Gain - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150128656 chr3:150128657 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_116469 0 0 2 BUD13 POSTAR2 ENCODE chr3:150128610-150128671
64251 chr12 58121022 58121022 1 + C T MESO 58121021 + 58121001 58121041 41 TCGCGCTCCTCCCTGCAAGACCAGGGATCAACGGAAAAGGC TCGCGCTCCTCCCTGCAAGACTAGGGATCAACGGAAAAGGC < 41bp 0.492818273708958 0.727076871443892 0.80333173 0.200899 prediction 0.454153742887784 Functional Gain - AGAP2-AS1 ENSG00000255737 CDS Human antisense chr12:58121021 chr12:58121022 stopgain . 0 22 hm5C_associated_SNPs_116471 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:58121019-58121067
64251 chr19 47763622 47763622 1 + A G rs141618668 47763619 + 47763599 47763639 41 AAAGCTGAACTTGAGGGAGTCGCAGTCACAGCTCCCCGAAA AAAGCTGAACTTGAGGGAGTCGCGGTCACAGCTCCCCGAAA < 41bp 0.563185795294794 0.790260849320182 0.49751106 0.8724385 prediction 0.454150108050777 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47763619 chr19:47763622 synonymous SNV . 0 24 hm5C_associated_SNPs_116472 0 0 10 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:47763620-47763640
64251 chr4 1389304 1389304 1 + A G rs13112754 1389301 + 1389281 1389321 41 GGAGTGCCCGCCTGCTCACACACATGCCGATGTGGAGTGCC GGAGTGCCCGCCTGCTCACACACGTGCCGATGTGGAGTGCC < 41bp 0.551196969307798 0.778268570416571 0.055162817 0.1532371 prediction 0.454143202217547 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389301 chr4:1389304 synonymous SNV . 0 24 hm5C_associated_SNPs_116473 0 0 3 EIF3H POSTAR2 ENCODE chr4:1389235-1389306
64251 chr19 48954339 48954339 1 + C T COAD 48954338 + 48954318 48954358 41 TCCATCCGCATCTGGGACATCCGGGCAGCCCCCAGCAAGGC TCCATCCGCATCTGGGACATCTGGGCAGCCCCCAGCAAGGC < 41bp 0.568809152049555 0.795879152526232 0.92144334 0.48556513 prediction 0.454140000953354 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48954338 chr19:48954339 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_116474 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:48954329-48954350
64251 chr2 131883457 131883457 1 + C T COAD 131883456 + 131883436 131883476 41 CCAATGGACTGCATCAACATCCGCACGGGGCAGGAATGTCG CCAATGGACTGCATCAACATCTGCACGGGGCAGGAATGTCG < 41bp 0.471049313148012 0.72705582028632 0.056955874 0.09034231 prediction 0.45411164057264 Functional Gain - PLEKHB2 ENSG00000115762 CDS Human protein_coding chr2:131883456 chr2:131883457 nonsynonymous SNV 0.955 3 22 hm5C_associated_SNPs_116477 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:131883446-131883468
64251 chr21 45094916 45094916 1 + C T UCEC 45094915 + 45094895 45094935 41 GCATGCGTTTGGTTCTTTAGCCGAATCAAGGTTTTCTTGGA GCATGCGTTTGGTTCTTTAGCTGAATCAAGGTTTTCTTGGA < 41bp 0.513129632660161 0.740181504887683 0.56026196 0.28251964 prediction 0.454103744455043 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45094915 chr21:45094916 stopgain 0.888 0 22 hm5C_associated_SNPs_116480 0 0 1 PPIG POSTAR2 ENCODE chr21:45094914-45094968
64251 chrX 151870035 151870035 1 + C T SKCM 151870034 + 151870014 151870054 41 AAGACAGTATCTTCGGGGATCCCAAGAAGCTGCTCACCCAA AAGACAGTATCTTCGGGGATCTCAAGAAGCTGCTCACCCAA < 41bp 0.485510479238132 0.727048164511534 0.6454941 0.890823 prediction 0.454096329023068 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870034 chrX:151870035 nonsynonymous SNV 0.010 3 22 hm5C_associated_SNPs_116482 0 0 5 DHX30 POSTAR2 ENCODE chrX:151870028-151870040
64251 chr19 13059625 13059625 1 + A G BLCA 13059622 + 13059602 13059642 41 ACCGAGCCGTGGAGTATCTGCTCACGGTGAGGTGGGGCTTC ACCGAGCCGTGGAGTATCTGCTCGCGGTGAGGTGGGGCTTC < 41bp 0.564813883001194 0.791861981716409 0.08636987 0.1901586 prediction 0.45409619743043 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059622 chr19:13059625 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_116483 0 0 3 PRPF8 POSTAR2 ENCODE chr19:13059599-13059646
64251 chr12 121416877 121416877 1 + C A LUSC 121416876 + 121416856 121416896 41 GGAGGCGGCCCACCAGAAAGCCGTGGTGGAGACCCTTCTGC GGAGGCGGCCCACCAGAAAGCAGTGGTGGAGACCCTTCTGC < 41bp 0.556121892728868 0.783165847102548 0.68666446 0.5841876 prediction 0.45408790874736 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121416876 chr12:121416877 synonymous SNV . 0 22 hm5C_associated_SNPs_116484 0 0 4 BUD13 POSTAR2 ENCODE chr12:121416860-121416907
64251 chr12 122265902 122265902 1 + C T UCEC 122265901 + 122265881 122265921 41 ATCGGGAGCAGCTACATGTTCCGGGTGGACCATGACACCAT ATCGGGAGCAGCTACATGTTCTGGGTGGACCATGACACCAT < 41bp 0.573650822948342 0.800694363275439 0.8404684 0.49126014 prediction 0.454087080654193 Functional Gain - SETD1B ENSG00000139718 CDS Human protein_coding chr12:122265901 chr12:122265902 nonsynonymous SNV 0.986 5 22 hm5C_associated_SNPs_116485 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:122265865-122265903
64251 chr19 1105487 1105487 1 + C T HNSC 1105486 + 1105466 1105506 41 GTTTGCGGATCCTGGCCTTCCCGTGTAACCAGTTCGGGAAG GTTTGCGGATCCTGGCCTTCCTGTGTAACCAGTTCGGGAAG < 41bp 0.535465365488223 0.762501871260021 0.22056586 0.094522506 prediction 0.454073011543595 Functional Gain - GPX4 ENSG00000167468 CDS Human protein_coding chr19:1105486 chr19:1105487 nonsynonymous SNV 0.969 3 22 hm5C_associated_SNPs_116490 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:1105377-1105491
64251 chr8 38065149 38065149 1 + C T SKCM 38065148 + 38065128 38065168 41 TTATACTCAGACCAGTTACTCCACAGAAGTTCCAAGTACTT TTATACTCAGACCAGTTACTCTACAGAAGTTCCAAGTACTT < 41bp 0.464669276542533 0.727035042245038 0.090586394 0.2771452 prediction 0.454070084490077 Functional Gain - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38065148 chr8:38065149 synonymous SNV . 0 22 hm5C_associated_SNPs_116492 0 0 13 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:38065101-38065153
64251 chr21 45107874 45107874 1 + C T SKCM 45107873 + 45107853 45107893 41 ATGGCAGTGGCCTGTCCACGCCGGCCTGGCCTCCATTGCAG ATGGCAGTGGCCTGTCCACGCTGGCCTGGCCTCCATTGCAG < 41bp 0.510906943484089 0.737936768579939 0.08209285 0.049656242 prediction 0.454059650191698 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107873 chr21:45107874 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_116495 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45107840-45107880
64251 chr11 76507006 76507006 1 + A G UCEC 76507003 + 76506983 76507023 41 GCTACCTGGAGTCGCTTGACCTCAGCCACAATGGCCTGACA GCTACCTGGAGTCGCTTGACCTCGGCCACAATGGCCTGACA < 41bp 0.545898686610341 0.772927923873977 0.3032068 0.458564 prediction 0.454058474527272 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76507003 chr11:76507006 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_116496 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr11:76506997-76507020
64251 chr9 71835835 71835835 1 + C T rs181450555 71835834 + 71835814 71835854 41 GCCCCGGAAGGTCCAGGTGGCCGCACTTCAGGCCAGCCCTC GCCCCGGAAGGTCCAGGTGGCTGCACTTCAGGCCAGCCCTC < 41bp 0.484894755573099 0.727027594071474 0.614181 0.8711412 prediction 0.454055188142948 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71835834 chr9:71835835 synonymous SNV . 0 22 hm5C_associated_SNPs_116497 1 0 16 BUD13 POSTAR2 ENCODE chr9:71835796-71835846
64251 chr16 3333831 3333831 1 + C A UCEC 3333830 + 3333810 3333850 41 GACCTGACGATGGCGTCGGGCCCGGGCTCCCAGGAACGGGA GACCTGACGATGGCGTCGGGCACGGGCTCCCAGGAACGGGA < 41bp 0.465159148802301 0.727026524074727 0.29824045 0.16157898 prediction 0.454053048149454 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3333830 chr16:3333831 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_116499 0 0 1 FXR2 POSTAR2 ENCODE chr16:3333806-3333905
64251 chr8 17104485 17104485 1 + C G rs371085361 17104481 + 17104461 17104501 41 TGGAGCGCTGGGCGGCCAGGCTCCCTGGCTGGCCGGTTTGG TGGAGCGCTGGGCGGCCAGGCTCCGTGGCTGGCCGGTTTGG < 41bp 0.597340212015062 0.824365402260372 0.09541756 0.19302872 prediction 0.45405038049062 Functional Gain - VPS37A ENSG00000155975 UTR5 Human protein_coding chr8:17104481 chr8:17104485 . . 0 25 hm5C_associated_SNPs_116501 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819211 chr8:17104480-17104500
64251 chr11 71693935 71693935 1 + A G UCEC 71693932 + 71693912 71693952 41 TTTGTTACCTTCCGAGCCACCCGAAAACCTCTAGTACAGAC TTTGTTACCTTCCGAGCCACCCGGAAACCTCTAGTACAGAC < 41bp 0.49013044688181 0.72702486426747 0.0067727566 0.0036872625 prediction 0.454049728534941 Functional Gain - RNF121 ENSG00000137522 CDS Human protein_coding chr11:71693932 chr11:71693935 synonymous SNV . 0 24 hm5C_associated_SNPs_116502 0 0 2 DDX24 POSTAR2 ENCODE chr11:71693891-71693962
64251 chr12 54383198 54383198 1 + C T UCEC 54383197 + 54383177 54383217 41 ATGAACCGAGAGAATCGGATCCGGGAACTGACCTCCAATTT ATGAACCGAGAGAATCGGATCTGGGAACTGACCTCCAATTT < 41bp 0.511680256454979 0.738702450942586 0.797166 0.24896145 prediction 0.454044388975214 Functional Gain - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54383197 chr12:54383198 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_116504 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:54383188-54383230
64251 chr17 48046976 48046976 1 + C T SKCM 48046975 + 48046955 48046995 41 CTCCCCCAATTTGTCCTACTCCAGGCCGTATGGCCACCTCC CTCCCCCAATTTGTCCTACTCTAGGCCGTATGGCCACCTCC < 41bp 0.503741911227678 0.730753509469542 0.9001422 0.69296306 prediction 0.454023196483728 Functional Gain - DLX4 ENSG00000108813 CDS Human protein_coding chr17:48046975 chr17:48046976 synonymous SNV . 0 22 hm5C_associated_SNPs_116508 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:48046955-48046978
64251 chr19 34912478 34912478 1 + C A THCA 34912477 + 34912457 34912497 41 CTGCCCTACATCAGAAGTCACCGAGCTCCCAGCCTGCAGCC CTGCCCTACATCAGAAGTCACAGAGCTCCCAGCCTGCAGCC < 41bp 0.459989881910811 0.727006934920658 0.18561903 0.662311 prediction 0.454013869841317 Functional Gain - PDCD2L ENSG00000126249 CDS Human protein_coding chr19:34912477 chr19:34912478 synonymous SNV . 0 22 hm5C_associated_SNPs_116509 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:34912470-34912504
64251 chr17 73106605 73106605 1 + C A HNSC 73106604 + 73106584 73106624 41 CTCGCCAACTTCGCTTATGACCCCAGCAACTACGAGTATCT CTCGCCAACTTCGCTTATGACACCAGCAACTACGAGTATCT < 41bp 0.580484319619698 0.807487591635482 0.12016329 0.20413199 prediction 0.454006544031567 Functional Gain - ARMC7 ENSG00000125449 CDS Human protein_coding chr17:73106604 chr17:73106605 nonsynonymous SNV 0.910 4 22 hm5C_associated_SNPs_116512 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:73106570-73106608
64251 chr13 114290349 114290349 1 + C T UCEC 114290348 + 114290328 114290368 41 CATGCGGAGCAGCAGGCCAGCCGGCCACCGCCACCCAACTC CATGCGGAGCAGCAGGCCAGCTGGCCACCGCCACCCAACTC < 41bp 0.556537492820452 0.783528200929542 0.3488803 0.20208293 prediction 0.453981416218179 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114290348 chr13:114290349 nonsynonymous SNV 0.988 1 22 hm5C_associated_SNPs_116515 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:114290339-114290390
64251 chr7 2418817 2418817 1 + C T LUAD 2418816 + 2418796 2418836 41 ATGGAAGATTTCCGGAAGTACCGGAAAATGGCCCAGGAGCT ATGGAAGATTTCCGGAAGTACTGGAAAATGGCCCAGGAGCT < 41bp 0.568985037178208 0.795971202196842 0.88803077 0.75291955 prediction 0.453972330037267 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2418816 chr7:2418817 nonsynonymous SNV 0.945 4 22 hm5C_associated_SNPs_116517 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2418766-2418837
64251 chr6 27368880 27368880 1 + C A SKCM 27368876 + 27368856 27368896 41 TAATTCAGCATCAACGAATACACACTGGAGAGAATCCCTAT TAATTCAGCATCAACGAATACACAATGGAGAGAATCCCTAT < 41bp 0.500674242744654 0.727658418732048 0.019639283 0.050524414 prediction 0.453968351974789 Functional Gain - ZNF391 ENSG00000124613 CDS Human protein_coding chr6:27368876 chr6:27368880 nonsynonymous SNV 0.665 3 25 hm5C_associated_SNPs_116518 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:27368872-27368906
64251 chr16 88779068 88779068 1 + C A UCEC 88779067 + 88779047 88779087 41 GTCGGTGCTTTGGTGCTCTGCCCAGGAGCTGGTGGGATCCG GTCGGTGCTTTGGTGCTCTGCACAGGAGCTGGTGGGATCCG < 41bp 0.470047486199504 0.726978252951583 0.14568791 0.26521823 prediction 0.453956505903166 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779067 chr16:88779068 synonymous SNV . 0 22 hm5C_associated_SNPs_116521 0 0 2 BUD13 POSTAR2 ENCODE chr16:88779032-88779110
64251 chr21 30714995 30714995 1 + C G rs61735775 30714994 + 30714974 30715014 41 AGCAGTGCTGCCTCCCTGTGCCAGAGGAAACAGTGAGCCTG AGCAGTGCTGCCTCCCTGTGCGAGAGGAAACAGTGAGCCTG < 41bp 0.64456400966634 0.871536906284726 0.89058924 0.8909587 prediction 0.453945793236773 Functional Gain - BACH1 ENSG00000156273 CDS Human protein_coding chr21:30714994 chr21:30714995 synonymous SNV . 0 22 hm5C_associated_SNPs_116526 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr21:30714959-30714995
64251 chr1 1244876 1244876 1 + T C UCEC 1244874 + 1244854 1244894 41 TGCCCAGCGACTTCCACGCTCGTCACGCAGCCACGTCCCGG TGCCCAGCGACTTCCACGCTCGCCACGCAGCCACGTCCCGG < 41bp 0.569731357288761 0.796698690331297 0.036769778 0.027378708 prediction 0.453934666085072 Functional Gain - PUSL1 ENSG00000169972 CDS Human protein_coding chr1:1244874 chr1:1244876 synonymous SNV . 0 23 hm5C_associated_SNPs_116529 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:1244850-1244888
64251 chr15 22955225 22955225 1 + A G LUAD 22955222 + 22955202 22955242 41 CTTGCGGGGCGAGAAGGACCCCAAGAGCGGCTTCGACATAA CTTGCGGGGCGAGAAGGACCCCAGGAGCGGCTTCGACATAA < 41bp 0.53209122836101 0.759050560501595 0.058149338 0.35445708 prediction 0.45391866428117 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22955222 chr15:22955225 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_116532 0 0 8 BUD13 POSTAR2 ENCODE chr15:22955182-22955228
64251 chr6 125284295 125284295 1 + C G rs116377893 125284291 + 125284271 125284311 41 TGTTGAACCCTCCCAGCACCCGCTCTTCCTTCCCCAGCCCC TGTTGAACCCTCCCAGCACCCGCTGTTCCTTCCCCAGCCCC < 41bp 0.516254311844856 0.743212651270763 0.060264945 0.18815514 prediction 0.453916678851814 Functional Gain - RNF217 ENSG00000146373 CDS Human protein_coding chr6:125284291 chr6:125284295 nonsynonymous SNV 0.277 1 25 hm5C_associated_SNPs_116533 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:125284292-125284344
64251 chr17 27075138 27075138 1 + C T UCEC 27075137 + 27075117 27075157 41 CACACTTGCAGCATGACTGCCCCAAGCGGCGCCTCAAGTGC CACACTTGCAGCATGACTGCCTCAAGCGGCGCCTCAAGTGC < 41bp 0.444509684448858 0.726957181345365 0.012981147 0.06425622 prediction 0.45391436269073 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075137 chr17:27075138 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_116534 0 0 3 PPIG POSTAR2 ENCODE chr17:27075137-27075196
64251 chr6 26390341 26390341 1 + T C STAD 26390339 + 26390319 26390359 41 ATCCTGGCTGTTTTCATCATCTTCATGGCTGTCAGCATCTG ATCCTGGCTGTTTTCATCATCTCCATGGCTGTCAGCATCTG < 41bp 0.432323103399966 0.726953314909163 0.15563509 0.94741106 prediction 0.453906629818325 Functional Gain - BTN2A2 ENSG00000124508 CDS Human protein_coding chr6:26390339 chr6:26390341 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_116536 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:26390329-26390344
64251 chr1 17297200 17297200 1 + C T rs147926226 17297199 + 17297179 17297219 41 GCAGAGAAGGGCCGCCTGGACCGCACCCTCACGGGGGCTGA GCAGAGAAGGGCCGCCTGGACTGCACCCTCACGGGGGCTGA < 41bp 0.474650327674582 0.726952997570742 0.07821992 0.09388542 prediction 0.453905995141483 Functional Gain - CROCC ENSG00000058453 CDS Human protein_coding chr1:17297199 chr1:17297200 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_116537 0 0 1 BUD13 POSTAR2 ENCODE chr1:17297130-17297227
64251 chr8 145584637 145584637 1 + C T rs566858747 145584636 + 145584616 145584656 41 ACCAGCATCTATCACGTGTTCCACAGCAGAAAGGACTGTGC ACCAGCATCTATCACGTGTTCTACAGCAGAAAGGACTGTGC < 41bp 0.566656759273972 0.793608929997303 0.103661895 0.19428903 prediction 0.453904341446661 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145584636 chr8:145584637 nonsynonymous SNV 0.905 1 22 hm5C_associated_SNPs_116538 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145584577-145584644
64251 chr2 55746995 55746995 1 + C A STAD 55746994 + 55746974 55747014 41 GTGGAGAGCATCGCGGGGTTCCTGCGAGGCCCAGACTGGTC GTGGAGAGCATCGCGGGGTTCATGCGAGGCCCAGACTGGTC < 41bp 0.477688158199541 0.726945562242244 0.36090505 0.6563482 prediction 0.453891124484487 Functional Gain - CFAP36 ENSG00000163001 CDS Human protein_coding chr2:55746994 chr2:55746995 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_116542 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:55746991-55747040
64251 chr2 231740407 231740407 1 + A G rs113416613 231740404 + 231740384 231740424 41 TGTCCTCCCAGGTCCGGACTCAGATGGAGCTGGAAGAGGAT TGTCCTCCCAGGTCCGGACTCAGGTGGAGCTGGAAGAGGAT < 41bp 0.536262723764769 0.763206077248025 0.7832894 0.8717275 prediction 0.45388670696651 Functional Gain - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231740404 chr2:231740407 nonsynonymous SNV 0.851 0 24 hm5C_associated_SNPs_116543 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:231740393-231740436
64251 chr19 18054397 18054397 1 + C T GBM 18054396 + 18054376 18054416 41 CCTTTGAGGAAGCCCAGCTGCCGCGGCTCAAACAAGAGAAC CCTTTGAGGAAGCCCAGCTGCTGCGGCTCAAACAAGAGAAC < 41bp 0.490048066677107 0.726939793364344 0.24628532 0.33931005 prediction 0.453879586728688 Functional Gain - CCDC124 ENSG00000007080 CDS Human protein_coding chr19:18054396 chr19:18054397 nonsynonymous SNV 0.746 4 22 hm5C_associated_SNPs_116544 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:18054376-18054404
64251 chr12 52470862 52470862 1 + T C STAD 52470860 + 52470840 52470880 41 GATAACGTGTTTGACACAGGCTTGCGGGACGTGCAGCCCTA GATAACGTGTTTGACACAGGCTCGCGGGACGTGCAGCCCTA < 41bp 0.456309017579076 0.726915738792503 0.15145394 0.20391813 prediction 0.453831477585005 Functional Gain - ATG101 ENSG00000123395 CDS Human protein_coding chr12:52470860 chr12:52470862 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_116553 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:52470830-52470870
64251 chr6 114181505 114181505 1 + C T rs45593337 114181504 + 114181484 114181524 41 CTGTCGCGCCAGAGAAGCCGCCCGCCAGCGACGAGACCAAG CTGTCGCGCCAGAGAAGCCGCTCGCCAGCGACGAGACCAAG < 41bp 0.503291848237421 0.730206380430762 0.20852765 0.38689694 prediction 0.453829064386682 Functional Gain - MARCKS ENSG00000155130 CDS Human other chr6:114181504 chr6:114181505 nonsynonymous SNV 0.058 0 22 hm5C_associated_SNPs_116554 0 0 1 RPS3 POSTAR2 ENCODE chr6:114181380-114181508
64251 chr15 32915738 32915738 1 + C T COAD 32915737 + 32915717 32915757 41 TTTAGAAGACCATATTCATACCGAAGGGCTTTTTCGGAAAT TTTAGAAGACCATATTCATACTGAAGGGCTTTTTCGGAAAT < 41bp 0.470934829269582 0.726914476303685 0.0831804 0.11004627 prediction 0.45382895260737 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32915737 chr15:32915738 synonymous SNV . 0 22 hm5C_associated_SNPs_116555 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr15:32915724-32915739
64251 chr11 606519 606519 1 + C G HNSC 606515 + 606495 606535 41 CTGACCTGCTGGGCAGCATCCTGTCGGGCCAGAGCCTCCTG CTGACCTGCTGGGCAGCATCCTGTGGGGCCAGAGCCTCCTG < 41bp 0.426081392384391 0.726905777505742 0.10794172 0.26337603 prediction 0.453811555011483 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:606515 chr11:606519 nonsynonymous SNV 0.961 4 25 hm5C_associated_SNPs_116556 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr11:606507-606535
64251 chr3 30732960 30732960 1 + C T SKCM 30732959 + 30732939 30732979 41 ACTGAGTGCTGGGACCACGACCCAGAGGCCCGTCTCACAGC ACTGAGTGCTGGGACCACGACTCAGAGGCCCGTCTCACAGC < 41bp 0.463916032897495 0.726871995278436 0.05339223 0.03441924 prediction 0.453743990556873 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30732959 chr3:30732960 nonsynonymous SNV 0.894 5 22 hm5C_associated_SNPs_116573 0 0 4 GRWD1 POSTAR2 ENCODE chr3:30732939-30732988
64251 chr7 72413745 72413745 1 + C T HNSC 72413744 + 72413724 72413764 41 CTTCGGTGCAGCCACCAGCTCCGGCTTTGGAGCCACCACCC CTTCGGTGCAGCCACCAGCTCTGGCTTTGGAGCCACCACCC < 41bp 0.506743443026536 0.733605982255081 0.7960698 0.6823288 prediction 0.453725078457091 Functional Gain - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413744 chr7:72413745 synonymous SNV . 0 22 hm5C_associated_SNPs_116576 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:72413690-72413747
64251 chr5 176079867 176079867 1 + C T COAD 176079866 + 176079846 176079886 41 AACAACAACGTCAAGGCCTACCGGGACGACATTGACCTCCA AACAACAACGTCAAGGCCTACTGGGACGACATTGACCTCCA < 41bp 0.573538261455069 0.800393580121877 0.20239595 0.32843438 prediction 0.453710637333616 Functional Gain - TSPAN17 ENSG00000048140 CDS Human protein_coding chr5:176079866 chr5:176079867 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_116578 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:176079857-176079909
64251 chr1 248039460 248039460 1 + C T OV 248039459 + 248039439 248039479 41 AGGGGGAAACCACGCCATCTCCTGAGAATGGGGTCTGGGCC AGGGGGAAACCACGCCATCTCTTGAGAATGGGGTCTGGGCC < 41bp 0.554673948642644 0.781528471534259 0.4339123 0.21196404 prediction 0.45370904578323 Functional Gain - TRIM58 ENSG00000162722 CDS Human protein_coding chr1:248039459 chr1:248039460 nonsynonymous SNV 0.027 4 22 hm5C_associated_SNPs_116579 0 0 1 XRCC6 POSTAR2 ENCODE chr1:248039446-248039524
64251 chr12 110012659 110012659 1 + C T SKCM 110012658 + 110012638 110012678 41 AAGTCCTACTGGTGTCTGCTCCGGGGAAAGTCATCCTTCAT AAGTCCTACTGGTGTCTGCTCTGGGGAAAGTCATCCTTCAT < 41bp 0.539559797914908 0.766405729560223 0.9402496 0.8878556 prediction 0.453691863290629 Functional Gain - MVK ENSG00000110921 CDS Human protein_coding chr12:110012658 chr12:110012659 nonsynonymous SNV 0.985 5 22 hm5C_associated_SNPs_116582 1 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr12:110012637-110012670
64251 chr7 128470849 128470849 1 + T C STAD 128470847 + 128470827 128470867 41 TGCAATGAGCACCTCAAGTGCGTGGGCAAGCGCCTGACCGA TGCAATGAGCACCTCAAGTGCGCGGGCAAGCGCCTGACCGA < 41bp 0.513239917704588 0.740072081314156 0.8583199 0.7960868 prediction 0.453664327219135 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128470847 chr7:128470849 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_116588 0 0 2 RBM15 POSTAR2 ENCODE chr7:128470827-128470892
64251 chr1 1262942 1262942 1 + C A STAD 1262938 + 1262918 1262958 41 CTCCTACAACGCCTCGCTGGCCGCCTACCACCCCTGGGTCG CTCCTACAACGCCTCGCTGGCCGCATACCACCCCTGGGTCG < 41bp 0.340707019273353 0.726828232989057 0.18536931 0.3428444 prediction 0.453656465978114 Functional Gain - CPTP ENSG00000224051 CDS Human protein_coding chr1:1262938 chr1:1262942 synonymous SNV . 0 25 hm5C_associated_SNPs_116589 0 0 1 EFTUD2 POSTAR2 ENCODE chr1:1262919-1262962
64251 chr5 137803189 137803189 1 + C T LUAD 137803188 + 137803168 137803208 41 TCCTGTGATCGCCGCTTCTCCCGCTCCGACGAGCTCACCCG TCCTGTGATCGCCGCTTCTCCTGCTCCGACGAGCTCACCCG < 41bp 0.516770715658177 0.743596765701898 0.098558545 0.083191186 prediction 0.453652100087444 Functional Gain - EGR1 ENSG00000120738 CDS Human protein_coding chr5:137803188 chr5:137803189 nonsynonymous SNV 0.733 4 22 hm5C_associated_SNPs_116590 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137803145-137803189
64251 chr10 103919720 103919720 1 + C A LIHC 103919716 + 103919696 103919736 41 GAAGTCTCTGGGAACCCAGCCTCCCAAGAAGGCTGTGGAGA GAAGTCTCTGGGAACCCAGCCTCCAAAGAAGGCTGTGGAGA < 41bp 0.271713553739517 0.726822602011847 0.26116523 0.9571516 prediction 0.453645204023694 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919716 chr10:103919720 synonymous SNV . 0 25 hm5C_associated_SNPs_116591 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:103919694-103919772
64251 chr1 156084863 156084863 1 + C G COAD 156084859 + 156084839 156084879 41 GTCTACATCGACCGTGTGCGCTCGCTGGAAACGGAGAACGC GTCTACATCGACCGTGTGCGCTCGGTGGAAACGGAGAACGC < 41bp 0.610701665417142 0.837522424960659 0.15462175 0.24865443 prediction 0.453641519087034 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156084859 chr1:156084863 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_116593 1 0 9 EIF3A POSTAR2 GSE65004,GSM1585666 chr1:156084848-156084870
64251 chr1 162557312 162557312 1 + A G HNSC 162557309 + 162557289 162557329 41 GAACCAGTTGGAGTGGTTTGCCGAGTGGATGGAGTTTACCA GAACCAGTTGGAGTGGTTTGCCGGGTGGATGGAGTTTACCA < 41bp 0.514335473456881 0.741146347235555 0.8821968 0.90737426 prediction 0.453621747557349 Functional Gain - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162557309 chr1:162557312 synonymous SNV . 0 24 hm5C_associated_SNPs_116597 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:162557299-162557330
64251 chr7 98985793 98985793 1 + T G STAD 98985790 + 98985770 98985810 41 TGCGGATCAACCGGGCTGCCCGCTGCGTGCGCTGGGCCCCC TGCGGATCAACCGGGCTGCCCGCGGCGTGCGCTGGGCCCCC < 41bp 0.709385144921199 0.936186388733546 0.36365575 0.89900684 prediction 0.453602487624694 Functional Gain - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985790 chr7:98985793 nonsynonymous SNV 0.090 1 24 hm5C_associated_SNPs_116601 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:98985778-98985811
64251 chr2 133403647 133403647 1 - T C rs139508764 133403650 - 133403630 133403670 41 TCCGCACCACCATCCTGTTCCTCAAATTAGCCCTCTTCTCG TCCGCACCACCATCCTGTTCCTCGAATTAGCCCTCTTCTCG < 41bp 0.541132331918279 0.767924072169329 0.19839758 0.15188408 prediction 0.453583480502101 Functional Gain - LYPD1 ENSG00000150551 CDS Human protein_coding chr2:133403650 chr2:133403647 nonsynonymous SNV 0.890 1 24 hm5C_associated_SNPs_116603 0 0 2 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr2:133403629-133403666
64251 chr16 67575651 67575651 1 + C T COAD 67575650 + 67575630 67575670 41 CCACCTATAGCCAGAGCCCACCGGACACACCCTCACTTCGG CCACCTATAGCCAGAGCCCACTGGACACACCCTCACTTCGG < 41bp 0.582574814966142 0.80936022503496 0.88787395 0.8103118 prediction 0.453570820137636 Functional Gain - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67575650 chr16:67575651 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_116604 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr16:67575645-67575671
64251 chr1 149858584 149858584 1 + C G SKCM 149858580 + 149858560 149858600 41 CGCCAAGGCCAAGTCGCGCTCGTCCCGCGCTGGCCTCCAGT CGCCAAGGCCAAGTCGCGCTCGTCGCGCGCTGGCCTCCAGT < 41bp 0.450576146701644 0.726770600119369 0.15120396 0.33105493 prediction 0.453541200238738 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858580 chr1:149858584 synonymous SNV . 0 25 hm5C_associated_SNPs_116606 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:149858560-149858620
64251 chr6 32948492 32948492 1 + C A UCEC 32948488 + 32948468 32948508 41 AGACACCAGTGATTCAGACTCAGGCTAAGGGGTCAGGCCAG AGACACCAGTGATTCAGACTCAGGATAAGGGGTCAGGCCAG < 41bp 0.568936524025557 0.795704651759929 0.89343494 0.91129756 prediction 0.453536255468743 Functional Gain - BRD2 ENSG00000204256 CDS Human protein_coding chr6:32948488 chr6:32948492 synonymous SNV . 0 25 hm5C_associated_SNPs_116608 0 0 36 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:32948391-32948520
64251 chrX 49030736 49030736 1 + C T BLCA 49030735 + 49030715 49030755 41 TATGATGCCTATGTCACCTTCCCCGTTCGGCAGCCAAGACA TATGATGCCTATGTCACCTTCTCCGTTCGGCAGCCAAGACA < 41bp 0.452721300068451 0.726762767266786 0.07226804 0.28513703 prediction 0.453525534533572 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49030735 chrX:49030736 nonsynonymous SNV 0.314 3 22 hm5C_associated_SNPs_116610 0 0 5 METTL3 POSTAR2 GSE46705,GSM1135006 chrX:49030720-49030740
64251 chr19 53960768 53960768 1 + T C rs578133293 53960766 + 53960746 53960786 41 TGTCATCAATGTGCCAAGGTCTTCAGTCTGAGTTCACTCCT TGTCATCAATGTGCCAAGGTCTCCAGTCTGAGTTCACTCCT < 41bp 0.555192244056235 0.781952643488238 0.08704743 0.93202245 prediction 0.453520798864006 Functional Gain - ZNF761;ZNF765-ZNF761 ENSG00000160336 ncRNA_exonic Human protein_coding chr19:53960766 chr19:53960768 . . 0 23 hm5C_associated_SNPs_116611 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:53960747-53960769
64251 chr2 220366687 220366687 1 + C T COAD 220366686 + 220366666 220366706 41 GCTCAATGCTGATGTCTGCTCCGACTTCCCCTTGAGTGCTA GCTCAATGCTGATGTCTGCTCTGACTTCCCCTTGAGTGCTA < 41bp 0.542420962278922 0.769178288968739 0.06307006 0.067040265 prediction 0.453514653379634 Functional Gain - GMPPA ENSG00000144591 CDS Human protein_coding chr2:220366686 chr2:220366687 synonymous SNV . 0 22 hm5C_associated_SNPs_116613 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:220366663-220366701
64251 chr1 38489261 38489261 1 + C T SKCM 38489260 + 38489240 38489280 41 GAAGAAAGAAACGGTGAACTCCCCAGCTATTTATAAATTTC GAAGAAAGAAACGGTGAACTCTCCAGCTATTTATAAATTTC < 41bp 0.576221906836778 0.802977577611614 0.39497626 0.9491817 prediction 0.453511341549671 Functional Gain - UTP11 ENSG00000183520 CDS Human protein_coding chr1:38489260 chr1:38489261 synonymous SNV . 0 22 hm5C_associated_SNPs_116614 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:38489233-38489294
64251 chr4 7026910 7026910 1 + C T SKCM 7026909 + 7026889 7026929 41 CCCAGTTCCTGACCCGGCTGCCCGAGGACCTGCCCGCCGAG CCCAGTTCCTGACCCGGCTGCTCGAGGACCTGCCCGCCGAG < 41bp 0.605612258632222 0.832367824930347 0.3963006 0.4232684 prediction 0.45351113259625 Functional Gain - TBC1D14 ENSG00000132405 CDS Human protein_coding chr4:7026909 chr4:7026910 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_116615 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:7026882-7026916
64251 chr15 29346863 29346863 1 + A G UCEC 29346860 + 29346840 29346880 41 GCATGGGCCTGAGCCAGGGCCTGAGGACTCTGTAGAGGCCT GCATGGGCCTGAGCCAGGGCCTGGGGACTCTGTAGAGGCCT < 41bp 0.478078794376855 0.726750398550351 0.38723603 0.60381204 prediction 0.453500797100702 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346860 chr15:29346863 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_116619 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346776-29346863
64251 chr17 34893857 34893857 1 + C T UCEC 34893856 + 34893836 34893876 41 GTTGGTCTATTAAATGCCAACCGCGAAGGAATAATCTCTAC GTTGGTCTATTAAATGCCAACTGCGAAGGAATAATCTCTAC < 41bp 0.552873387470583 0.779618332156044 0.1154941 0.21722847 prediction 0.453489889370922 Functional Gain - PIGW ENSG00000184886 CDS Human other chr17:34893856 chr17:34893857 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_116622 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:34893827-34893860
64251 chr14 39650221 39650221 1 + T A OV 39650217 + 39650197 39650237 41 AATGGAATTTGAAATTGAGCCAGATAAAGAATGTAAAACCC AATGGAATTTGAAATTGAGCCAGAAAAAGAATGTAAAACCC < 41bp 0.409799760662789 0.726736783818684 0.39906085 0.36349237 prediction 0.453473567637367 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650217 chr14:39650221 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_116625 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:39650005-39650232
64251 chr9 131369952 131369952 1 + C T STAD 131369951 + 131369931 131369971 41 TGAGCTAGCCAAGGATGTCACCGGAGCTGAGGCATTGCTGG TGAGCTAGCCAAGGATGTCACTGGAGCTGAGGCATTGCTGG < 41bp 0.493167607423491 0.726733283330529 0.8715929 0.4497191 prediction 0.453466566661058 Functional Gain - SPTAN1 ENSG00000197694 CDS Human protein_coding chr9:131369951 chr9:131369952 synonymous SNV . 0 22 hm5C_associated_SNPs_116628 2 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131369930-131369966
64251 chr17 76168358 76168358 1 + C A rs576110898 76168357 + 76168337 76168377 41 ACAAGTGCCTCAGCTTCCCCCCGGCCCGGGTCAGGCCGTGG ACAAGTGCCTCAGCTTCCCCCAGGCCCGGGTCAGGCCGTGG < 41bp 0.459744878369989 0.726728526564605 0.111237854 0.29752165 prediction 0.45345705312921 Functional Gain - SYNGR2 ENSG00000108639 UTR3 Human protein_coding chr17:76168357 chr17:76168358 . . 0 22 hm5C_associated_SNPs_116632 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:76168028-76168450
64251 chr9 139818418 139818418 1 + A G UCEC 139818415 + 139818395 139818435 41 CTTTGTGGTGATGAAGGGCCCGAATGACGCCCTGCTGCGGT CTTTGTGGTGATGAAGGGCCCGAGTGACGCCCTGCTGCGGT < 41bp 0.553671230938674 0.780384380949141 0.096841365 0.47617847 prediction 0.453426300020934 Functional Gain - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139818415 chr9:139818418 nonsynonymous SNV 0.371 1 24 hm5C_associated_SNPs_116636 0 0 3 FXR2 POSTAR2 ENCODE chr9:139818394-139818457
64251 chr15 90904578 90904578 1 + C A rs150056690 90904577 + 90904557 90904597 41 ATTGCTACTGTCTTCAAGCACCCCAAATAGAGAAAACCTGG ATTGCTACTGTCTTCAAGCACACCAAATAGAGAAAACCTGG < 41bp 0.559813280278105 0.786523011734027 0.0892598 0.14273408 prediction 0.453419462911845 Functional Gain - ZNF774 ENSG00000196391 UTR3 Human protein_coding chr15:90904577 chr15:90904578 . . 0 22 hm5C_associated_SNPs_116637 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr15:90904555-90904582
64251 chr7 102574507 102574507 1 + A G UCEC 102574504 + 102574484 102574524 41 TCCAACCCGGTCAAACGCTACGCACCAGGCCTCCCGTGTGA TCCAACCCGGTCAAACGCTACGCGCCAGGCCTCCCGTGTGA < 41bp 0.562502144732819 0.789210180192751 0.13841921 0.32080197 prediction 0.453416070919865 Functional Gain - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102574504 chr7:102574507 synonymous SNV . 0 24 hm5C_associated_SNPs_116638 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:102574487-102574526
64251 chr7 36193947 36193947 1 + T C STAD 36193945 + 36193925 36193965 41 TGGCGGACCATGGGGAGCACCCTGGGCTGCCACCGCTCCAT TGGCGGACCATGGGGAGCACCCCGGGCTGCCACCGCTCCAT < 41bp 0.462320936432165 0.726704662291595 0.9298306 0.94828117 prediction 0.453409324583189 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36193945 chr7:36193947 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_116639 0 0 2 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:36193920-36193948
64251 chr14 50779201 50779201 1 + C G rs191158453 50779200 + 50779180 50779220 41 AACGCTGGGCTGACTGAAAACCTGGCCCTTTGGGTCGCGCG AACGCTGGGCTGACTGAAAACGTGGCCCTTTGGGTCGCGCG < 41bp 0.424160422613376 0.726703388000888 0.40494183 0.80547184 prediction 0.453406776001775 Functional Gain - ATP5S ENSG00000087299;ENSG00000125375 UTR5 Human other chr14:50779200 chr14:50779201 . . 0 22 hm5C_associated_SNPs_116640 0 0 1 EFTUD2 POSTAR2 ENCODE chr14:50779149-50779213
64251 chr12 52390425 52390425 1 + T G rs188880255 52390422 + 52390402 52390442 41 CAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTA CAAGCCACTAGCCCACTCCCCAGGTGGCCCTTCTGCCCTTA < 41bp 0.38574188895636 0.726700564720005 0.11877212 0.82702065 prediction 0.453401129440011 Functional Gain - ACVR1B ENSG00000135503 UTR3 Human protein_coding chr12:52390422 chr12:52390425 . . 0 24 hm5C_associated_SNPs_116641 0 0 2 FAM120A POSTAR2 ENCODE chr12:52390409-52390494
64251 chr7 5633095 5633095 1 + C G BLCA 5633091 + 5633071 5633111 41 CGTGCCCTGGGGCGTCGACTCGCTCATCACCCTCGCCTTCC CGTGCCCTGGGGCGTCGACTCGCTGATCACCCTCGCCTTCC < 41bp 0.610524851819521 0.83722061361 0.12642863 0.22102007 prediction 0.453391523580958 Functional Gain - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5633091 chr7:5633095 synonymous SNV . 0 25 hm5C_associated_SNPs_116643 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:5633053-5633105
64251 chr11 64074744 64074744 1 + C G UCEC 64074743 + 64074723 64074763 41 GGGTTCCTCGGAGACAGAGACCGAGCCTCCTGTGGCCCTGG GGGTTCCTCGGAGACAGAGACGGAGCCTCCTGTGGCCCTGG < 41bp 0.402624449375425 0.726688706140734 0.63807 0.9090251 prediction 0.453377412281468 Functional Gain - ESRRA ENSG00000173153 CDS Human protein_coding chr11:64074743 chr11:64074744 synonymous SNV . 0 22 hm5C_associated_SNPs_116646 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:64074743-64074744
64251 chr1 44877835 44877835 1 + C T SKCM 44877834 + 44877814 44877854 41 CCTTCCCAACCCTCTGGCATCCCCAGCACTGATGGTCCTGG CCTTCCCAACCCTCTGGCATCTCCAGCACTGATGGTCCTGG < 41bp 0.454297186540235 0.726684659613349 0.1319269 0.9491215 prediction 0.453369319226698 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44877834 chr1:44877835 synonymous SNV . 0 22 hm5C_associated_SNPs_116647 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:44877820-44877840
64251 chr3 127318286 127318286 1 + T C LIHC 127318284 + 127318264 127318304 41 CCCTCACCTCCAGCCCTGGCCGTGACCTTCCACCATTTGAG CCCTCACCTCCAGCCCTGGCCGCGACCTTCCACCATTTGAG < 41bp 0.541118849607555 0.767802357578463 0.07529703 0.079845965 prediction 0.453367015941816 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127318284 chr3:127318286 synonymous SNV . 0 23 hm5C_associated_SNPs_116648 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:127318259-127318327
64251 chr1 116929941 116929941 1 + T C UCEC 116929939 + 116929919 116929959 41 TCTGCTCGTGCAGCTGAGATCCTGGCGCGAGATGGTCCCAA TCTGCTCGTGCAGCTGAGATCCCGGCGCGAGATGGTCCCAA < 41bp 0.456778081266256 0.726680639774015 0.65169543 0.8538655 prediction 0.453361279548031 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116929939 chr1:116929941 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_116649 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:116929914-116929952
64251 chr7 6057485 6057485 1 + C T COAD 6057484 + 6057464 6057504 41 ACATCGTGATCAACGCAAACCCGGCCTCCCCTCCCCTCTCC ACATCGTGATCAACGCAAACCTGGCCTCCCCTCCCCTCTCC < 41bp 0.559423713389431 0.786102363045326 0.07978922 0.08221927 prediction 0.45335729931179 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6057484 chr7:6057485 nonsynonymous SNV 0.948 4 22 hm5C_associated_SNPs_116650 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:6057478-6057506
64251 chr6 118635280 118635280 1 + C A LUAD 118635279 + 118635259 118635299 41 CACCTACATAGCCCAGGACCCCCGAGTGTATAAGCAGTTCC CACCTACATAGCCCAGGACCCACGAGTGTATAAGCAGTTCC < 41bp 0.54373159664198 0.770400627770373 0.085989386 0.08159554 prediction 0.453338062256786 Functional Gain - SLC35F1 ENSG00000196376 CDS Human protein_coding chr6:118635279 chr6:118635280 synonymous SNV . 0 22 hm5C_associated_SNPs_116651 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:118635258-118635285
64251 chr10 45480374 45480374 1 + C T CESC 45480373 + 45480353 45480393 41 CCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTAT CCCGGTGAGGCCCAGCGCATCTGGCGACACCGGTTCTCTAT < 41bp 0.567404738275468 0.794071183468932 0.9087516 0.58914953 prediction 0.453332890386927 Functional Gain - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45480373 chr10:45480374 nonsynonymous SNV 0.892 3 22 hm5C_associated_SNPs_116652 0 0 1 PPIG POSTAR2 ENCODE chr10:45480253-45480410
64251 chr1 168014205 168014205 1 + T C COAD 168014203 + 168014183 168014223 41 GAGAAAGAAATGACCTCAATCTTGATCGCTCTTGTGGGGTT GAGAAAGAAATGACCTCAATCTCGATCGCTCTTGTGGGGTT < 41bp 0.646837384166147 0.873502729120486 0.12174696 0.31239927 prediction 0.453330689908677 Functional Gain - DCAF6 ENSG00000143164 CDS Human protein_coding chr1:168014203 chr1:168014205 synonymous SNV . 0 23 hm5C_associated_SNPs_116654 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr1:168014200-168014220
64251 chr22 50961504 50961504 1 + C T LUAD 50961503 + 50961483 50961523 41 ACCAGCTGGTCTCACGGTTCCCCCAGCTCAATGAGTGGTGT ACCAGCTGGTCTCACGGTTCCTCCAGCTCAATGAGTGGTGT < 41bp 0.452946564513661 0.726661607272068 0.08159155 0.91493523 prediction 0.453323214544135 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50961503 chr22:50961504 nonsynonymous SNV 0.167 0 22 hm5C_associated_SNPs_116657 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:50961464-50961515
64251 chr12 71974201 71974201 1 + A G STAD 71974198 + 71974178 71974218 41 AGATGCTGGAATGTTTCAGGCTCAAGGTAGGACTTGCTATG AGATGCTGGAATGTTTCAGGCTCGAGGTAGGACTTGCTATG < 41bp 0.490387760963832 0.72666116594731 0.21651462 0.19653398 prediction 0.453322331894619 Functional Gain - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71974198 chr12:71974201 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_116658 0 0 2 PRPF8 POSTAR2 ENCODE chr12:71974171-71974234
64251 chr6 28121056 28121056 1 + A G UCEC 28121053 + 28121033 28121073 41 TGAATGTGGGAAAAGCTTTGCTCAGAGCTCAGGCCTTGTTC TGAATGTGGGAAAAGCTTTGCTCGGAGCTCAGGCCTTGTTC < 41bp 0.546557198615864 0.773215197404706 0.012877911 0.077892005 prediction 0.453315997577683 Functional Gain - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28121053 chr6:28121056 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_116660 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:28121027-28121101
64251 chr2 47637443 47637443 1 + C T LUAD 47637442 + 47637422 47637462 41 AATCTTGAGGCTCTCCTCATCCAGATTGGACCAAAGGAATG AATCTTGAGGCTCTCCTCATCTAGATTGGACCAAAGGAATG < 41bp 0.566891539713012 0.793549002498714 0.28355566 0.26504588 prediction 0.453314925571405 Functional Gain - MSH2 ENSG00000095002 CDS Human protein_coding chr2:47637442 chr2:47637443 stopgain 1.000 1 22 hm5C_associated_SNPs_116661 2 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:47637342-47637482
64251 chr2 3606469 3606469 1 + C A rs6715189 3606465 + 3606445 3606485 41 GTGGAAGCCGCATTCCTCCCCTTGCCTTGGGCGCCCACCCC GTGGAAGCCGCATTCCTCCCCTTGACTTGGGCGCCCACCCC < 41bp 0.369308736993662 0.726651596898693 0.2845836 0.45813504 prediction 0.453303193797385 Functional Gain - RNASEH1-AS1 ENSG00000234171 ncRNA_exonic Human antisense chr2:3606465 chr2:3606469 . . 0 25 hm5C_associated_SNPs_116662 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:3606469-3606470
64251 chr10 99211511 99211511 1 + C T LUAD 99211510 + 99211490 99211530 41 CTGCTGCTGGGTTACAGGCGCCGCTGTCCACCTCTACTCCG CTGCTGCTGGGTTACAGGCGCTGCTGTCCACCTCTACTCCG < 41bp 0.535086280935567 0.76172731219591 0.23251733 0.16534904 prediction 0.453282062520686 Functional Gain - ZDHHC16 ENSG00000171307 CDS Human protein_coding chr10:99211510 chr10:99211511 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_116669 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917668 chr10:99211500-99211536
64251 chr11 47594369 47594369 1 + T G rs140783575 47594366 + 47594346 47594386 41 GATTCAGGGAAGGGCTGAGGCACTGCCTTTCTAGTATGTGC GATTCAGGGAAGGGCTGAGGCACGGCCTTTCTAGTATGTGC < 41bp 0.373416670428832 0.726638967291476 0.03029722 0.071334004 prediction 0.453277934582952 Functional Gain - KBTBD4;PTPMT1 ENSG00000123444 UTR3 Human protein_coding chr11:47594366 chr11:47594369 . . 0 24 hm5C_associated_SNPs_116672 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47594321-47594379
64251 chr6 96054060 96054060 1 + C G UCEC 96054056 + 96054036 96054076 41 TATGAAATTGGTCTGAGTGCCGCACTTCAGACACGCCCCAG TATGAAATTGGTCTGAGTGCCGCAGTTCAGACACGCCCCAG < 41bp 0.597221044862338 0.823859262278682 0.030175716 0.20027888 prediction 0.453276434832687 Functional Gain - MANEA ENSG00000172469 CDS Human protein_coding chr6:96054056 chr6:96054060 nonsynonymous SNV 0.007 1 25 hm5C_associated_SNPs_116673 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:96054037-96054065
64251 chr1 42865086 42865086 1 + A G SKCM 42865083 + 42865063 42865103 41 CTTGAATTGCAGGCCTCCAGCTAAACCAGAAGGCCCTCACC CTTGAATTGCAGGCCTCCAGCTAGACCAGAAGGCCCTCACC < 41bp 0.541805334805526 0.768441948978603 0.52293015 0.40219533 prediction 0.453273228346154 Functional Gain - RIMKLA ENSG00000177181 CDS Human protein_coding chr1:42865083 chr1:42865086 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_116675 0 0 1 DDX3X POSTAR2 ENCODE chr1:42865072-42865177
64251 chr20 36031660 36031660 1 + C A COAD 36031656 + 36031636 36031676 41 GAGTGTCCCGAGTCCCTGCACGACCTCATGTGCCAGTGCTG GAGTGTCCCGAGTCCCTGCACGACATCATGTGCCAGTGCTG < 41bp 0.326844916120592 0.726617893780455 0.058363885 0.05419612 prediction 0.453235787560911 Functional Gain - SRC ENSG00000197122 CDS Human protein_coding chr20:36031656 chr20:36031660 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_116682 0 0 1 RPS3 POSTAR2 ENCODE chr20:36031612-36031663
64251 chr1 66081791 66081791 1 + C G rs34499590 66081787 + 66081767 66081807 41 GGTCAGAAGATGTGGGAAATCACACGAAATTCACTTTCCTG GGTCAGAAGATGTGGGAAATCACAGGAAATTCACTTTCCTG < 41bp 0.432989876196842 0.726596895268138 0.20330146 0.26292527 prediction 0.453193790536276 Functional Gain - LEPR ENSG00000116678 CDS Human protein_coding chr1:66081787 chr1:66081791 nonsynonymous SNV 0.688 3 25 hm5C_associated_SNPs_116687 0 0 1 SND1 POSTAR2 ENCODE chr1:66081735-66081856
64251 chr19 13051444 13051444 1 + A G UCEC 13051441 + 13051421 13051461 41 ATGGACGGAGAGTGGGAACCCCCAGTGATTCAGAACCCTGA ATGGACGGAGAGTGGGAACCCCCGGTGATTCAGAACCCTGA < 41bp 0.536991871924494 0.763583452448135 0.58060884 0.5701711 prediction 0.453183161047281 Functional Gain - CALR ENSG00000179218 CDS Human protein_coding chr19:13051441 chr19:13051444 synonymous SNV . 0 24 hm5C_associated_SNPs_116690 0 0 37 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:13051363-13051462
64251 chr14 21961323 21961323 1 + T C UCEC 21961321 + 21961301 21961341 41 CACCAACTGTGGAAAGTAGTCCTGAGCGGCCTATGAACAAC CACCAACTGTGGAAAGTAGTCCCGAGCGGCCTATGAACAAC < 41bp 0.623652867249584 0.850240520980329 0.09561005 0.07227239 prediction 0.453175307461491 Functional Gain - TOX4 ENSG00000092203 CDS Human protein_coding chr14:21961321 chr14:21961323 synonymous SNV . 0 23 hm5C_associated_SNPs_116692 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:21961323-21961346
64251 chr5 34950911 34950911 1 + T G rs192815915 34950909 + 34950889 34950929 41 GCTCAGAGGAGCCCTGGACTCTTGGTGCTGCACAAGGCCAT GCTCAGAGGAGCCCTGGACTCTGGGTGCTGCACAAGGCCAT < 41bp 0.66226850022253 0.888844976632841 0.4030545 0.80337846 prediction 0.453152952820622 Functional Gain - DNAJC21 ENSG00000168724 intronic Human protein_coding chr5:34950909 chr5:34950911 . . 0 23 hm5C_associated_SNPs_116695 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr5:34950899-34950923
64251 chr15 29346527 29346527 1 + C A LUAD 29346526 + 29346506 29346546 41 AGTGGACGGACTCGGCGGGCCCGCACCCCCACGGCCACGAG AGTGGACGGACTCGGCGGGCCAGCACCCCCACGGCCACGAG < 41bp 0.566229637057298 0.792800477369185 0.6327735 0.87931824 prediction 0.453141680623774 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346526 chr15:29346527 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_116697 0 0 3 FXR2 POSTAR2 ENCODE chr15:29346408-29346530
64251 chr17 21731541 21731541 1 + C G rs187566096 21731540 + 21731520 21731560 41 GGCAAGAAGTTGGAAGATGGCCGCACTCTTTCTGACTACAG GGCAAGAAGTTGGAAGATGGCGGCACTCTTTCTGACTACAG < 41bp 0.644813150096836 0.871380185292006 0.043817043 0.15794435 prediction 0.453134070390341 Functional Gain - UBBP4 ENSG00000263563 CDS Human transcribed_unprocessed_pseudogene chr17:21731540 chr17:21731541 nonsynonymous SNV 0.624 0 22 hm5C_associated_SNPs_116699 0 0 10 GEMIN5 POSTAR2 ENCODE chr17:21731467-21731550
64251 chr19 9270941 9270941 1 + C T COAD 9270940 + 9270920 9270960 41 GGGTAGCGTTCAAGGGCAGGCCGCACCTCACTCAGCACATG GGGTAGCGTTCAAGGGCAGGCTGCACCTCACTCAGCACATG < 41bp 0.516611033175437 0.743153585916046 0.10360354 0.099139124 prediction 0.453085105481219 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9270940 chr19:9270941 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_116705 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:9270936-9270955
64251 chr19 3193402 3193402 1 + C T CESC 3193401 + 3193381 3193421 41 ACCCAGGCTGCCTCCGCCTCCCAGGGCTCCGCCTCTGCTGC ACCCAGGCTGCCTCCGCCTCCTAGGGCTCCGCCTCTGCTGC < 41bp 0.56532404900131 0.79185905912573 0.89488405 0.38407087 prediction 0.45307002024884 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3193401 chr19:3193402 stopgain 0.948 0 22 hm5C_associated_SNPs_116708 1 0 4 PRPF8 POSTAR2 ENCODE chr19:3193388-3193523
64251 chr17 4619471 4619471 1 + C A LGG 4619467 + 4619447 4619487 41 GTGGTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGG GTGGTGCTTGTGGACCCTGACTACATGAAGGACCGCAAAGG < 41bp 0.301266179670736 0.72653274407818 0.09365776 0.9051974 prediction 0.453065488156361 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4619467 chr17:4619471 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_116709 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4619439-4619473
64251 chr19 8468154 8468154 1 + A G rs538034370 8468151 + 8468131 8468171 41 ATGTGGGTCCTGGCTGGGTGCGCAGCCCCTGTCCTTGTTAC ATGTGGGTCCTGGCTGGGTGCGCGGCCCCTGTCCTTGTTAC < 41bp 0.543938354251059 0.770470298958238 0.3452365 0.69373465 prediction 0.453063889414358 Functional Gain - RAB11B ENSG00000185236 intronic Human protein_coding chr19:8468151 chr19:8468154 . . 0 24 hm5C_associated_SNPs_116710 0 0 2 BUD13 POSTAR2 ENCODE chr19:8468088-8468155
64251 chr11 65088467 65088467 1 + C T COAD 65088466 + 65088446 65088486 41 CCTCGGACATGATCAGCCCACCGCTGGGGGACTTCCGCCAC CCTCGGACATGATCAGCCCACTGCTGGGGGACTTCCGCCAC < 41bp 0.565468496727631 0.792000038114086 0.4078857 0.43631172 prediction 0.453063082772909 Functional Gain - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088466 chr11:65088467 nonsynonymous SNV 0.962 5 22 hm5C_associated_SNPs_116711 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65088441-65088498
64251 chr16 28602126 28602126 1 + C A SKCM 28602125 + 28602105 28602145 41 TGAGCCGGCGCCGTGTCATCCCGCTGCCCCAGTGGAAGGCC TGAGCCGGCGCCGTGTCATCCAGCTGCCCCAGTGGAAGGCC < 41bp 0.462241752781736 0.726529838483396 0.41388842 0.8397776 prediction 0.453059676966792 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28602125 chr16:28602126 nonsynonymous SNV 0.954 4 22 hm5C_associated_SNPs_116714 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:28602125-28602126
64251 chr17 42429504 42429504 1 + C A UCEC 42429500 + 42429480 42429520 41 TGGAGAAGATGCCTGCCCGCCGGGCTTCCTTATCCCACCCC TGGAGAAGATGCCTGCCCGCCGGGATTCCTTATCCCACCCC < 41bp 0.70677153019333 0.933267354954782 0.75449145 0.86910784 prediction 0.452991649522905 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42429500 chr17:42429504 nonsynonymous SNV 0.004 0 25 hm5C_associated_SNPs_116724 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:42429494-42429521
64251 chr16 2035892 2035892 1 + C A SKCM 2035891 + 2035871 2035911 41 TGCAGGAACCACCCAGACACCCGCACCCGGGCATGCTTCAC TGCAGGAACCACCCAGACACCAGCACCCGGGCATGCTTCAC < 41bp 0.57195888209478 0.798449935399427 0.10694009 0.09201276 prediction 0.452982106609293 Functional Gain - GFER ENSG00000127554 CDS Human protein_coding chr16:2035891 chr16:2035892 nonsynonymous SNV 0.622 0 22 hm5C_associated_SNPs_116726 0 0 1 LSM11 POSTAR2 ENCODE chr16:2035804-2035900
64251 chr19 49633717 49633717 1 + C G GBM 49633713 + 49633693 49633733 41 AGGAGGCCCTGGAGCGGCAGCGCGCCGAGGTGTGCCAGCTG AGGAGGCCCTGGAGCGGCAGCGCGGCGAGGTGTGCCAGCTG < 41bp 0.630347831997123 0.856834637096113 0.60457337 0.89828444 prediction 0.452973610197981 Functional Gain - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49633713 chr19:49633717 nonsynonymous SNV 0.755 0 25 hm5C_associated_SNPs_116729 0 0 2 PPIG POSTAR2 ENCODE chr19:49633686-49633849
64251 chr20 4680070 4680070 1 + T C rs532493114 4680068 + 4680048 4680088 41 ATGGTGGTGGCTGGGGGCAGCCTCATGGTGGTGGCTGGGGG ATGGTGGTGGCTGGGGGCAGCCCCATGGTGGTGGCTGGGGG < 41bp 0.598795574883041 0.825276900475224 0.5182059 0.8765784 prediction 0.452962651184367 Functional Gain - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680068 chr20:4680070 synonymous SNV . 0 23 hm5C_associated_SNPs_116731 1 0 8 DDX6 POSTAR2 ENCODE chr20:4680070-4680149
64251 chr17 10614313 10614313 1 + T C UCEC 10614311 + 10614291 10614331 41 GATCCTTTTGGTGTATACCACGTCAACCTAGAAGGAGTTAT GATCCTTTTGGTGTATACCACGCCAACCTAGAAGGAGTTAT < 41bp 0.60141239356858 0.827891741604003 0.1285497 0.17384237 prediction 0.452958696070846 Functional Gain - ADPRM ENSG00000170222 CDS Human protein_coding chr17:10614311 chr17:10614313 nonsynonymous SNV 0.722 1 23 hm5C_associated_SNPs_116732 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:10614277-10614327
64251 chr19 48229404 48229404 1 + C A rs150300804 48229403 + 48229383 48229423 41 CTGGAGGAGCAGGACCTCTTCCGCGACATCCAGGGCCTGCC CTGGAGGAGCAGGACCTCTTCAGCGACATCCAGGGCCTGCC < 41bp 0.583202508959925 0.809681666628419 0.51874 0.6081091 prediction 0.452958315336988 Functional Gain - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48229403 chr19:48229404 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_116733 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48229380-48229407
64251 chr6 111409147 111409147 1 + C T UCS 111409146 + 111409126 111409166 41 GCCCCATGAGCCCCCCGAACCCCCCGAGGGCGGCTGGGGCT GCCCCATGAGCCCCCCGAACCTCCCGAGGGCGGCTGGGGCT < 41bp 0.558503056676925 0.78496315071078 0.13811615 0.14328805 prediction 0.452920188067709 Functional Gain - SLC16A10 ENSG00000112394 CDS Human protein_coding chr6:111409146 chr6:111409147 synonymous SNV . 0 22 hm5C_associated_SNPs_116736 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:111409132-111409189
64251 chr6 161412934 161412934 1 + C A rs367947922 161412933 + 161412913 161412953 41 GCCAGGCTGCAGCTTACTGCCCGCCGCGGCCATGCGGGGCT GCCAGGCTGCAGCTTACTGCCAGCCGCGGCCATGCGGGGCT < 41bp 0.506366211397843 0.732819745108016 0.014878422 0.31972963 prediction 0.452907067420344 Functional Gain - MAP3K4 ENSG00000272841 ncRNA_exonic Human antisense chr6:161412933 chr6:161412934 . . 0 22 hm5C_associated_SNPs_116741 0 0 2 DDX3X POSTAR2 ENCODE chr6:161412833-161412989
64251 chr20 34099477 34099477 1 + A G rs200151359 34099474 + 34099454 34099494 41 AGCAGCCACAGCCAGGAGCACACAGACAGAAGACTGTGTCA AGCAGCCACAGCCAGGAGCACACGGACAGAAGACTGTGTCA < 41bp 0.536654652494175 0.763106576757889 0.1407268 0.5136488 prediction 0.452903848527427 Functional Gain - CEP250 ENSG00000126001 UTR3 Human protein_coding chr20:34099474 chr20:34099477 . . 0 24 hm5C_associated_SNPs_116742 0 0 1 DDX55 POSTAR2 ENCODE chr20:34099466-34099530
64251 chr3 141626037 141626037 1 + C T rs72988221 141626036 + 141626016 141626056 41 GGTTTTTCCAAAACCAGTGACCGCATTGGAATATACATTCA GGTTTTTCCAAAACCAGTGACTGCATTGGAATATACATTCA < 41bp 0.477898170625924 0.726448248380111 0.037528902 0.3099482 prediction 0.452896496760222 Functional Gain - ATP1B3 ENSG00000069849 CDS Human protein_coding chr3:141626036 chr3:141626037 synonymous SNV . 0 22 hm5C_associated_SNPs_116744 0 0 13 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:141626004-141626042
64251 chr9 35608465 35608465 1 + A G UCEC 35608462 + 35608442 35608482 41 ATGGATCCTGGAGCAGCTGCCTGAGCCAGCCCCACTCACCA ATGGATCCTGGAGCAGCTGCCTGGGCCAGCCCCACTCACCA < 41bp 0.481140641435442 0.726447088035882 0.36430967 0.7204957 prediction 0.452894176071764 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35608462 chr9:35608465 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_116745 0 0 1 PPIG POSTAR2 ENCODE chr9:35608434-35608489
64251 chrX 73749267 73749267 1 + C T BLCA 73749266 + 73749246 73749286 41 CTGCCAATGATTGCTGGGCCCCCCATTGCAGGTGAGGCTGA CTGCCAATGATTGCTGGGCCCTCCATTGCAGGTGAGGCTGA < 41bp 0.592405612483531 0.818849571357819 0.021258593 0.9515891 prediction 0.452887917748577 Functional Gain - SLC16A2 ENSG00000147100 CDS Human protein_coding chrX:73749266 chrX:73749267 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_116747 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:73749254-73749273
64251 chr7 73811452 73811452 1 + C T SKCM 73811451 + 73811431 73811471 41 GCTGGAGGCCAATCGTCACTCCCCAGGGCCGGAGAGGGACC GCTGGAGGCCAATCGTCACTCTCCAGGGCCGGAGAGGGACC < 41bp 0.622165987169646 0.848605029601778 0.1664103 0.916088 prediction 0.452878084864265 Functional Gain - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73811451 chr7:73811452 synonymous SNV . 0 22 hm5C_associated_SNPs_116749 0 0 1 LIN28B POSTAR2 ENCODE chr7:73811451-73811513
64251 chr19 30164969 30164969 1 + C T STAD 30164968 + 30164948 30164988 41 GTGCTCAACAAGCGCAAGTACCGCAGCCAGCACATCATCCC GTGCTCAACAAGCGCAAGTACTGCAGCCAGCACATCATCCC < 41bp 0.56793806796317 0.794371693676369 0.1894896 0.30421886 prediction 0.452867251426398 Functional Gain - PLEKHF1 ENSG00000166289 CDS Human protein_coding chr19:30164968 chr19:30164969 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_116750 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:30164968-30165003
64251 chr11 1858034 1858034 1 + T A LIHC 1858030 + 1858010 1858050 41 TTCTCTCTCCGGTACGTGCCCAGCTCAGGCCGGCTGACCGT TTCTCTCTCCGGTACGTGCCCAGCACAGGCCGGCTGACCGT < 41bp 0.655807437137409 0.882234626915097 0.13662946 0.12045804 prediction 0.452854379555376 Functional Gain - SYT8 ENSG00000149043 CDS Human protein_coding chr11:1858030 chr11:1858034 nonsynonymous SNV 0.377 0 25 hm5C_associated_SNPs_116756 0 0 1 EFTUD2 POSTAR2 ENCODE chr11:1858009-1858059
64251 chr12 12022498 12022498 1 + C T SKCM 12022497 + 12022477 12022517 41 GACCCCGAGCAGCGGCCCCTCCGGTCCCCCCTGGACAACAT GACCCCGAGCAGCGGCCCCTCTGGTCCCCCCTGGACAACAT < 41bp 0.486262898824497 0.726424511365337 0.07695046 0.09887731 prediction 0.452849022730674 Functional Gain - ETV6 ENSG00000139083 CDS Human protein_coding chr12:12022497 chr12:12022498 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_116757 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:12022491-12022535
64251 chr12 57971825 57971825 1 + A G LUSC 57971822 + 57971802 57971842 41 TCCAGACCCTCCACAACCTTCGCAAGCTGTTCGTTCAAGAC TCCAGACCCTCCACAACCTTCGCGAGCTGTTCGTTCAAGAC < 41bp 0.546195318708762 0.772612309764894 0.23336351 0.20413506 prediction 0.452833982112265 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57971822 chr12:57971825 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_116761 0 0 3 U2AF1 POSTAR2 ENCODE chr12:57971781-57971829
64251 chr14 70234911 70234911 1 + C G CESC 70234910 + 70234890 70234930 41 TATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGAC TATTCATCGGGAGACTAAATCGAGCGGCCAGGGAGAAGGAC < 41bp 0.398715331431714 0.726415799413247 0.9095626 0.9348837 prediction 0.452831598826494 Functional Gain - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70234910 chr14:70234911 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_116762 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:70234858-70234925
64251 chr10 75520112 75520112 1 + C T LUSC 75520111 + 75520091 75520131 41 CACTGCCACCTATGCACTCCCCGCAGCAGCCAGGCTATCAG CACTGCCACCTATGCACTCCCTGCAGCAGCCAGGCTATCAG < 41bp 0.599131293336412 0.825546329067186 0.022362053 0.061915904 prediction 0.452830071461548 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75520111 chr10:75520112 nonsynonymous SNV 0.121 0 22 hm5C_associated_SNPs_116763 0 0 4 PTBP1 POSTAR2 GSE57278,GSM1486178 chr10:75520111-75520112
64251 chr10 94452258 94452258 1 + C T CESC 94452257 + 94452237 94452277 41 GCAGAAATATCTCTCTCCGCCCGAGAGGAAGCGTCTGGCCA GCAGAAATATCTCTCTCCGCCTGAGAGGAAGCGTCTGGCCA < 41bp 0.477786893986531 0.726398487231581 0.08385643 0.065821946 prediction 0.452796974463161 Functional Gain - HHEX ENSG00000152804 CDS Human protein_coding chr10:94452257 chr10:94452258 synonymous SNV . 0 22 hm5C_associated_SNPs_116770 0 0 9 BUD13 POSTAR2 ENCODE chr10:94452229-94452383
64251 chr20 18296625 18296625 1 + C A SKCM 18296621 + 18296601 18296641 41 TCATCTCCCACCAGAGGACGCACTCTGGGGAGAAGCCCTAC TCATCTCCCACCAGAGGACGCACTATGGGGAGAAGCCCTAC < 41bp 0.312054698213261 0.72639690693933 0.30474812 0.5241705 prediction 0.45279381387866 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18296621 chr20:18296625 nonsynonymous SNV 0.847 3 25 hm5C_associated_SNPs_116772 0 0 2 LIN28A POSTAR2 GSE39873,GSM980594 chr20:18296620-18296640
64251 chr9 129974446 129974446 1 + C G rs113969504 129974445 + 129974425 129974465 41 CATCTGTTCTCTGGGGAACTCCGCAGCTGTGCCCACCATGG CATCTGTTCTCTGGGGAACTCGGCAGCTGTGCCCACCATGG < 41bp 0.648979013663222 0.875373679531026 0.76900566 0.9194478 prediction 0.452789331735608 Functional Gain - RALGPS1 ENSG00000136828 CDS Human protein_coding chr9:129974445 chr9:129974446 synonymous SNV . 0 22 hm5C_associated_SNPs_116773 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:129974441-129974461
64251 chr14 29237362 29237362 1 + A G UCEC 29237359 + 29237339 29237379 41 CCTTCAAGCGCGGTGCGCGCCTCACCTCCACCGGCCTCACC CCTTCAAGCGCGGTGCGCGCCTCGCCTCCACCGGCCTCACC < 41bp 0.542314744387639 0.768695527385016 0.055246323 0.07867044 prediction 0.452761565994754 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237359 chr14:29237362 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_116777 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714641 chr14:29237353-29237379
64251 chr16 843200 843200 1 + C A rs115699849 843196 + 843176 843216 41 CGTGCGGGACGTGCAGGCCACACGCGTGGGCCTCAAGGACC CGTGCGGGACGTGCAGGCCACACGAGTGGGCCTCAAGGACC < 41bp 0.705120451618379 0.931499179580531 0.27400106 0.78912425 prediction 0.452757455924304 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:843196 chr16:843200 synonymous SNV . 0 25 hm5C_associated_SNPs_116779 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr16:843183-843209
64251 chr1 156106821 156106821 1 + T G STAD 156106818 + 156106798 156106838 41 GAAGGCTGGGCAGGTGGTGACGGTGAGTGGCAGGGCGCTTG GAAGGCTGGGCAGGTGGTGACGGGGAGTGGCAGGGCGCTTG < 41bp 0.699715729348963 0.926090625604547 0.43891317 0.90259683 prediction 0.45274979251117 Functional Gain - LMNA ENSG00000160789 splicing Human protein_coding chr1:156106818 chr1:156106821 . 1.000 0 24 hm5C_associated_SNPs_116781 0 0 2 PRPF8 POSTAR2 ENCODE chr1:156106801-156106865
64251 chr15 40712345 40712345 1 + C A rs562252152 40712344 + 40712324 40712364 41 GAACACACATGCTGCTGAGTCCGCAGGGGGGGCAGAGCAGA GAACACACATGCTGCTGAGTCAGCAGGGGGGGCAGAGCAGA < 41bp 0.558022349353807 0.784395939400049 0.1350134 0.29796404 prediction 0.452747180092484 Functional Gain - IVD ENSG00000128928 UTR3 Human protein_coding chr15:40712344 chr15:40712345 . . 0 22 hm5C_associated_SNPs_116783 0 0 2 WDR33 POSTAR2 GSE61123,GSM1496985 chr15:40712314-40712346
64251 chr10 30723180 30723180 1 + C G rs549089186 30723179 + 30723159 30723199 41 CGCCCTGGTTCCTGCTTCTGCCGCTGCCGCCGCCGGATCCC CGCCCTGGTTCCTGCTTCTGCGGCTGCCGCCGCCGGATCCC < 41bp 0.611478434980793 0.837851337597973 0.30955422 0.7466523 prediction 0.45274580523436 Functional Gain - MAP3K8 ENSG00000107968 UTR5 Human protein_coding chr10:30723179 chr10:30723180 . . 0 22 hm5C_associated_SNPs_116784 0 0 3 DDX3X POSTAR2 ENCODE chr10:30723111-30723299
64251 chr6 155577906 155577906 1 - A G LUAD 155577908 - 155577888 155577928 41 CTGGAACTGAATTTCGATGTCTTTAGTAGGGCTGCCCTGCT CTGGAACTGAATTTCGATGTCTCTAGTAGGGCTGCCCTGCT < 41bp 0.587389229779044 0.813748827099295 0.13461825 0.9277907 prediction 0.452719194640503 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577908 chr6:155577906 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_116791 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:155577885-155577915
64251 chr7 142961667 142961667 1 + C A THCA 142961666 + 142961646 142961686 41 AAGCCTCCAGGTCTGCTTCCCCGCAAAGGACTATACATGGC AAGCCTCCAGGTCTGCTTCCCAGCAAAGGACTATACATGGC < 41bp 0.469171944573625 0.726354530352275 0.04463482 0.2621008 prediction 0.45270906070455 Functional Gain - GSTK1 ENSG00000197448 CDS Human protein_coding chr7:142961666 chr7:142961667 nonsynonymous SNV 0.090 0 22 hm5C_associated_SNPs_116793 0 0 1 GRWD1 POSTAR2 ENCODE chr7:142961638-142961678
64251 chr19 1912406 1912406 1 + C A rs558381236 1912402 + 1912382 1912422 41 GGCTGGGCCGGCCTCGGGCCCGCGCTCGCTGGCTGAGCTCC GGCTGGGCCGGCCTCGGGCCCGCGATCGCTGGCTGAGCTCC < 41bp 0.695655468799716 0.921997487440838 0.07738194 0.3006777 prediction 0.452684037282244 Functional Gain - ADAT3 ENSG00000213638 CDS Human protein_coding chr19:1912402 chr19:1912406 synonymous SNV . 0 25 hm5C_associated_SNPs_116797 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:1912403-1912428
64251 chr9 101602387 101602387 1 + C T HNSC 101602386 + 101602366 101602406 41 TGTATCCAGAACTGCATGTGCCTGAGGACAGGCCTGGCTTC TGTATCCAGAACTGCATGTGCTTGAGGACAGGCCTGGCTTC < 41bp 0.579863063886035 0.806198154748077 0.26420593 0.19180843 prediction 0.452670181724084 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101602386 chr9:101602387 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_116801 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:101602368-101602391
64251 chr22 42970257 42970257 1 - G C rs149853583 42970258 - 42970238 42970278 41 GGAGAAAGCAGCCCTGGAACCCAGACTCTGTCTCCCCCTTG GGAGAAAGCAGCCCTGGAACCGAGACTCTGTCTCCCCCTTG < 41bp 0.415534090898994 0.726331476385974 0.448693 0.8898879 prediction 0.452662952771947 Functional Gain - RRP7BP ENSG00000182841 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:42970258 chr22:42970257 . . 0 22 hm5C_associated_SNPs_116803 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:42970240-42970260
64251 chr2 7137104 7137104 1 + C T LUAD 7137103 + 7137083 7137123 41 CCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCTC CCTGGGACCTGGCCCTCGACCTGCTGGTGTCTTGCAAGCTC < 41bp 0.571892287125789 0.7982215786802 0.23591319 0.1471512 prediction 0.452658583108822 Functional Gain - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7137103 chr2:7137104 nonsynonymous SNV 0.962 4 22 hm5C_associated_SNPs_116804 0 0 2 PPIG POSTAR2 ENCODE chr2:7137078-7137150
64251 chr19 58983219 58983219 1 + C T COAD 58983218 + 58983198 58983238 41 CACACGGGCGAGCGGCCCTTCCGCTGCGTGGACTGTGGCAA CACACGGGCGAGCGGCCCTTCTGCTGCGTGGACTGTGGCAA < 41bp 0.494226623110192 0.726324176812551 0.18042833 0.11466369 prediction 0.452648353625101 Functional Gain - ZNF324 ENSG00000083812 CDS Human protein_coding chr19:58983218 chr19:58983219 nonsynonymous SNV 0.786 4 22 hm5C_associated_SNPs_116805 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:58983218-58983242
64251 chr4 178281803 178281803 1 + C A GBM 178281799 + 178281779 178281819 41 GGCAGTTTTATGCCTGTCCTCTACCTAGAGAAGCACAATGT GGCAGTTTTATGCCTGTCCTCTACATAGAGAAGCACAATGT < 41bp 0.293996102314941 0.726320381316806 0.11588195 0.89581347 prediction 0.452640762633613 Functional Gain - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178281799 chr4:178281803 nonsynonymous SNV 0.842 2 25 hm5C_associated_SNPs_116809 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:178281783-178281806
64251 chr11 86013504 86013504 1 + T C UCEC 86013502 + 86013482 86013522 41 GCCGTCGCCATGTTTGGCTGCTTGGTGGCGGGGAGGCTGGT GCCGTCGCCATGTTTGGCTGCTCGGTGGCGGGGAGGCTGGT < 41bp 0.577829358654509 0.804145771205769 0.2614746 0.25630626 prediction 0.45263282510252 Functional Gain - HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86013502 chr11:86013504 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_116812 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:86013493-86013518
64251 chr4 48385767 48385767 1 + A G SARC 48385764 + 48385744 48385784 41 TCAAATTTTCAAGTGCCAAACGGAGGAATACCTCGTATGCA TCAAATTTTCAAGTGCCAAACGGGGGAATACCTCGTATGCA < 41bp 0.525363670817959 0.75167568226836 0.90017354 0.93670404 prediction 0.452624022900802 Functional Gain - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48385764 chr4:48385767 synonymous SNV . 0 24 hm5C_associated_SNPs_116815 0 0 4 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr4:48385756-48385773
64251 chr7 135312732 135312732 1 + T C COAD 135312730 + 135312710 135312750 41 GTTGAAATAAGCATGTTTGGCATGAGAGACCCTCCAATGTT GTTGAAATAAGCATGTTTGGCACGAGAGACCCTCCAATGTT < 41bp 0.452229413147312 0.726308098665493 0.18179709 0.25816834 prediction 0.452616197330986 Functional Gain - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135312730 chr7:135312732 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_116817 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr7:135312681-135312744
64251 chr12 124155867 124155867 1 + T C UCEC 124155865 + 124155845 124155885 41 CTGAGGCTTCTGTGGGGGGACCTGGGTGTGTACGGCGCGGC CTGAGGCTTCTGTGGGGGGACCCGGGTGTGTACGGCGCGGC < 41bp 0.47686673008741 0.726305394741946 0.87575954 0.8972041 prediction 0.452610789483892 Functional Gain - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124155865 chr12:124155867 nonsynonymous SNV 0.848 1 23 hm5C_associated_SNPs_116818 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124155847-124155887
64251 chr22 20106642 20106642 1 + T G LUSC 20106639 + 20106619 20106659 41 TCCTGAGCAAGAAATTAAAACACTGGAAGAAGATGAAGAGG TCCTGAGCAAGAAATTAAAACACGGGAAGAAGATGAAGAGG < 41bp 0.335429023799958 0.726302676415856 0.61950856 0.685502 prediction 0.452605352831713 Functional Gain - RANBP1 ENSG00000099901 CDS Human protein_coding chr22:20106639 chr22:20106642 nonsynonymous SNV 0.950 3 24 hm5C_associated_SNPs_116821 0 0 34 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:20106573-20106647
64251 chr6 10726173 10726173 1 + T C UCEC 10726171 + 10726151 10726191 41 TCCCTGGCTGCAGGGCTGCTCTTTGGCAGTCTAGCCGGCCT TCCCTGGCTGCAGGGCTGCTCTCTGGCAGTCTAGCCGGCCT < 41bp 0.606090050196544 0.832379590581892 0.2630747 0.19993213 prediction 0.452579080770695 Functional Gain - TMEM14C ENSG00000111843 CDS Human protein_coding chr6:10726171 chr6:10726173 nonsynonymous SNV 0.139 3 23 hm5C_associated_SNPs_116828 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr6:10726168-10726213
64251 chr12 120117748 120117748 1 + C A COAD 120117744 + 120117724 120117764 41 TTGTTCCCTCACAGTGTGATCCAGCTTTGCTTCCTGAGCCC TTGTTCCCTCACAGTGTGATCCAGATTTGCTTCCTGAGCCC < 41bp 0.323923508976913 0.726284491094234 0.25126463 0.36120212 prediction 0.452568982188467 Functional Gain - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120117744 chr12:120117748 nonsynonymous SNV 0.937 1 25 hm5C_associated_SNPs_116830 0 0 5 METAP2 POSTAR2 ENCODE chr12:120117737-120117798
64251 chr13 49772236 49772236 1 + C T SKCM 49772235 + 49772215 49772255 41 GCGATGATGAGATAGAAAATCCCCATTATTCACCTTCTACA GCGATGATGAGATAGAAAATCTCCATTATTCACCTTCTACA < 41bp 0.453855992044029 0.72627414638963 0.1234009 0.94587183 prediction 0.45254829277926 Functional Gain - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49772235 chr13:49772236 nonsynonymous SNV 0.971 0 22 hm5C_associated_SNPs_116833 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:49772220-49772240
64251 chr7 100732316 100732316 1 + C T LUSC 100732315 + 100732295 100732335 41 GCACGGCTCTATCTCATCAACCCCAACGGCGAAGTGCAGTG GCACGGCTCTATCTCATCAACTCCAACGGCGAAGTGCAGTG < 41bp 0.571300878746302 0.797571556573677 0.09395954 0.9630598 prediction 0.452541355654751 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732315 chr7:100732316 nonsynonymous SNV 0.122 0 22 hm5C_associated_SNPs_116835 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100732293-100732321
64251 chr16 27353578 27353578 1 + C T CESC 27353577 + 27353557 27353597 41 CCAGCTGGTTTTTCTGCTCTCCGAGTAAGCCTGCGCTGGAG CCAGCTGGTTTTTCTGCTCTCTGAGTAAGCCTGCGCTGGAG < 41bp 0.499173768776666 0.726268845123929 0.90652764 0.70347536 prediction 0.452537690247858 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27353577 chr16:27353578 synonymous SNV . 0 22 hm5C_associated_SNPs_116836 0 0 1 PRPF8 POSTAR2 ENCODE chr16:27353566-27353625
64251 chr1 898117 898117 1 + C T UCEC 898116 + 898096 898136 41 GTGCGGCTGCCCTTGCTGAGCCGCGACTTCCTGCTGGGCCA GTGCGGCTGCCCTTGCTGAGCTGCGACTTCCTGCTGGGCCA < 41bp 0.54974846453568 0.776012125767775 0.21939221 0.1422073 prediction 0.452527322464191 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898116 chr1:898117 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_116839 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr1:898104-898125
64251 chr16 8829651 8829651 1 + C A rs77696190 8829647 + 8829627 8829667 41 GCCTGCAGCTTCCAGCACAGCTACCGCCTGCTGGTGCCTGG GCCTGCAGCTTCCAGCACAGCTACAGCCTGCTGGTGCCTGG < 41bp 0.30203512619939 0.726260237717014 0.08074692 0.12096244 prediction 0.452520475434027 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8829647 chr16:8829651 nonsynonymous SNV 0.010 0 25 hm5C_associated_SNPs_116840 0 0 2 DDX3X POSTAR2 ENCODE chr16:8829557-8829662
64251 chr6 139094905 139094905 1 + C T SKCM 139094904 + 139094884 139094924 41 CTGTACCTCTTACGTCACTTCCGTAAACAAACGGAGCTGCG CTGTACCTCTTACGTCACTTCTGTAAACAAACGGAGCTGCG < 41bp 0.505855781216046 0.732107919178102 0.1786372 0.27567875 prediction 0.452504275924112 Functional Gain - CCDC28A ENSG00000024862 CDS Human protein_coding chr6:139094904 chr6:139094905 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_116845 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:139094900-139094920
64251 chr1 27268257 27268257 1 + A G LIHC 27268254 + 27268234 27268274 41 TTTGCCCCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGC TTTGCCCCAGAAAAAGGATGCAGGGAATCATGAGGCCCAGC < 41bp 0.485785272048845 0.726224631745251 0.3119141 0.81027484 prediction 0.452449263490502 Functional Gain - NUDC ENSG00000090273 CDS Human protein_coding chr1:27268254 chr1:27268257 nonsynonymous SNV 0.992 0 24 hm5C_associated_SNPs_116853 0 0 2 UCHL5 POSTAR2 ENCODE chr1:27268253-27268308
64251 chr18 46237999 46237999 1 + C T SKCM 46237998 + 46237978 46238018 41 CCCATGACACAGGGCTACCACCCGATGCCCCATGAAGTGGA CCCATGACACAGGGCTACCACTCGATGCCCCATGAAGTGGA < 41bp 0.45436249605537 0.726224615996095 0.08308461 0.9139582 prediction 0.452449231992191 Functional Gain - CTIF ENSG00000134030 CDS Human protein_coding chr18:46237998 chr18:46237999 nonsynonymous SNV 0.972 4 22 hm5C_associated_SNPs_116854 0 0 1 PPIG POSTAR2 ENCODE chr18:46237988-46238022
64251 chr11 102221321 102221321 1 + A G rs145543164 102221318 + 102221298 102221338 41 CAGAACACCGGAGGCATTTTCCCAACTGTCCATTTTTGGAA CAGAACACCGGAGGCATTTTCCCGACTGTCCATTTTTGGAA < 41bp 0.502584313262829 0.728803823233985 0.12066728 0.21322456 prediction 0.452439019942312 Functional Gain - BIRC2 ENSG00000110330 CDS Human protein_coding chr11:102221318 chr11:102221321 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_116856 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:102221280-102221323
64251 chr1 109780429 109780429 1 + T C CESC 109780427 + 109780407 109780447 41 CAAAGAAGCAGAAGAAGCAACATGAGGGCAGCAAAAAGAAA CAAAGAAGCAGAAGAAGCAACACGAGGGCAGCAAAAAGAAA < 41bp 0.477274887144562 0.726212681635584 0.21757615 0.13396674 prediction 0.452425363271168 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109780427 chr1:109780429 synonymous SNV . 0 23 hm5C_associated_SNPs_116861 0 0 2 RBM15 POSTAR2 ENCODE chr1:109780365-109780449
64251 chr16 31234251 31234251 1 + C T STAD 31234250 + 31234230 31234270 41 CAGGTGTGGAGGAAGATGTTCCGGGCTCTGATGCCAGGTAC CAGGTGTGGAGGAAGATGTTCTGGGCTCTGATGCCAGGTAC < 41bp 0.53184595355013 0.758056832726486 0.899542 0.8654602 prediction 0.452421758352713 Functional Gain - TRIM72 ENSG00000177238 CDS Human protein_coding chr16:31234250 chr16:31234251 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_116865 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:31234229-31234265
64251 chr10 101716912 101716912 1 - G A KICH 101716913 - 101716893 101716933 41 ACTGCAGGCTGGCTGCAGGGCCGAAGCTGCTGGGGCGCACG ACTGCAGGCTGGCTGCAGGGCTGAAGCTGCTGGGGCGCACG < 41bp 0.483033308067701 0.726207753964848 0.24534288 0.32934242 prediction 0.452415507929697 Functional Gain - DNMBP ENSG00000107554 CDS Human protein_coding chr10:101716913 chr10:101716912 stopgain 1.000 1 22 hm5C_associated_SNPs_116867 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:101716912-101716913
64251 chr15 91354520 91354520 1 + C T rs56009845 91354519 + 91354499 91354539 41 GGAGCTCGACGAGGAAATACCCGTATCTTCCCACTACTTTG GGAGCTCGACGAGGAAATACCTGTATCTTCCCACTACTTTG < 41bp 0.47425316044286 0.726193020642695 0.2178807 0.42412233 prediction 0.452386041285389 Functional Gain - BLM ENSG00000197299 CDS Human protein_coding chr15:91354519 chr15:91354520 synonymous SNV . 0 22 hm5C_associated_SNPs_116871 2 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr15:91354520-91354540
64251 chr2 169417810 169417810 1 + C G HNSC 169417806 + 169417786 169417826 41 CGCAATCAGGAGAAGCCAAGCACGCTGACGAGGTTCTGTGA CGCAATCAGGAGAAGCCAAGCACGGTGACGAGGTTCTGTGA < 41bp 0.449215347888029 0.726184343820413 0.46213144 0.8711194 prediction 0.452368687640826 Functional Gain - CERS6 ENSG00000172292 CDS Human protein_coding chr2:169417806 chr2:169417810 nonsynonymous SNV 0.977 2 25 hm5C_associated_SNPs_116874 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:169417798-169417831
64251 chr6 28119655 28119655 1 + C T SKCM 28119654 + 28119634 28119674 41 TCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGGAGA TCCCAGAGTCCTACTCGTTCCTAGAAAGGAAGTTCTGGAGA < 41bp 0.584533871422216 0.810711403841223 0.23474348 0.36142892 prediction 0.452355064838015 Functional Gain - ZKSCAN8 ENSG00000198315 CDS Human protein_coding chr6:28119654 chr6:28119655 stopgain 0.999 1 22 hm5C_associated_SNPs_116876 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:28119627-28119673
64251 chr12 111057747 111057747 1 + A G rs140230455 111057744 + 111057724 111057764 41 TTCAGTGTCTTTTCTGCCTGCTCAGTTCCAGTTGTCACGTA TTCAGTGTCTTTTCTGCCTGCTCGGTTCCAGTTGTCACGTA < 41bp 0.528501120842118 0.754677414068175 0.12141526 0.21939138 prediction 0.452352586452114 Functional Gain - TCTN1 ENSG00000204852 CDS Human protein_coding chr12:111057744 chr12:111057747 synonymous SNV . 0 24 hm5C_associated_SNPs_116878 3 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:111057730-111057754
64251 chr22 41489065 41489065 1 + A G LIHC 41489062 + 41489042 41489082 41 TCAGCCAAGCGGCCTAAACTCTCATCTCCGGCCCTCTCGGC TCAGCCAAGCGGCCTAAACTCTCGTCTCCGGCCCTCTCGGC < 41bp 0.48982171434085 0.726167373894904 0.36725384 0.63272834 prediction 0.452334747789809 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41489062 chr22:41489065 synonymous SNV . 0 24 hm5C_associated_SNPs_116881 0 0 23 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:41489045-41489070
64251 chrX 114883835 114883835 1 + T C STAD 114883833 + 114883813 114883853 41 GAAGTAAAGCCCAAGATGGTCATGACTGTGTTTGCATGTTT GAAGTAAAGCCCAAGATGGTCACGACTGTGTTTGCATGTTT < 41bp 0.454234704373706 0.726161382280876 0.17955229 0.11034641 prediction 0.452322764561752 Functional Gain - PLS3 ENSG00000102024 CDS Human protein_coding chrX:114883833 chrX:114883835 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_116886 0 0 15 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:114883800-114883840
64251 chr6 4952583 4952583 1 + C T rs150165899 4952582 + 4952562 4952602 41 GGTCTCCCAGGTGTTTTGGCCCGGGACGTTCACTCAGGAAG GGTCTCCCAGGTGTTTTGGCCTGGGACGTTCACTCAGGAAG < 41bp 0.550316805027097 0.776464914432336 0.9009753 0.87180305 prediction 0.45229621881048 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4952582 chr6:4952583 synonymous SNV . 0 22 hm5C_associated_SNPs_116895 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:4952552-4952598
64251 chr8 145582294 145582294 1 + C A rs115940535 145582290 + 145582270 145582310 41 GGTGAGTCGGGTCGTGGCTGCTGCCGGGTCCTGCGCGCTCC GGTGAGTCGGGTCGTGGCTGCTGCAGGGTCCTGCGCGCTCC < 41bp 0.676508538044354 0.902650278706777 0.25536138 0.69296896 prediction 0.452283481324846 Functional Gain - SLC52A2 ENSG00000185803 UTR5 Human protein_coding chr8:145582290 chr8:145582294 . . 0 25 hm5C_associated_SNPs_116898 0 0 5 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:145582280-145582302
64251 chr12 6636077 6636077 1 + C T SKCM 6636076 + 6636056 6636096 41 GAGGAGTCCCCCGCAATGCTCCCCACTTTCCTGTTGATGAA GAGGAGTCCCCCGCAATGCTCTCCACTTTCCTGTTGATGAA < 41bp 0.446826230618338 0.72614019512015 0.032207042 0.9331156 prediction 0.452280390240301 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6636076 chr12:6636077 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_116899 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6636060-6636092
64251 chr19 49377891 49377891 1 + C A UCEC 49377887 + 49377867 49377907 41 AGCCTTGGGAGAAGCTGAGTCAGACCCACATCCCTCCCACC AGCCTTGGGAGAAGCTGAGTCAGAACCACATCCCTCCCACC < 41bp 0.32344257955773 0.726121936850795 0.4217089 0.729921 prediction 0.452243873701589 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377887 chr19:49377891 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_116908 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:49377880-49377900
64251 chr1 180832984 180832984 1 + C T COAD 180832983 + 180832963 180833003 41 GCTGGAGAGAACACTTTCCTCCGGGAAGAGATTGTATACCC GCTGGAGAGAACACTTTCCTCTGGGAAGAGATTGTATACCC < 41bp 0.535059349591974 0.761177886770567 0.33826673 0.23430139 prediction 0.452237074357186 Functional Gain - XPR1 ENSG00000143324 CDS Human protein_coding chr1:180832983 chr1:180832984 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_116909 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:180832963-180832987
64251 chrX 152914786 152914786 1 + C T SKCM 152914785 + 152914765 152914805 41 CGCCGGTGCCCGGTCCAGTGCCCGTGGTGGGGTTGGGCAGC CGCCGGTGCCCGGTCCAGTGCTCGTGGTGGGGTTGGGCAGC < 41bp 0.531065599111796 0.757175613760836 0.24178997 0.26578337 prediction 0.452220029298081 Functional Gain - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914785 chrX:152914786 nonsynonymous SNV 0.224 0 22 hm5C_associated_SNPs_116911 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chrX:152914782-152914825
64251 chr4 15063859 15063859 1 + T A HNSC 15063855 + 15063835 15063875 41 CCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATT CCATTAGTGCTCGGTTTGTTCAGCATCAGCATGGTGATATT < 41bp 0.398433904596816 0.72610882856099 0.10397062 0.114399135 prediction 0.452217657121981 Functional Gain - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15063855 chr4:15063859 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_116913 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:15063840-15063878
64251 chr19 50905094 50905094 1 + C T SKCM 50905093 + 50905073 50905113 41 CGCGGCTCCGTGCCTGTGCTCCGCGCCTTCGGGGTCACCGA CGCGGCTCCGTGCCTGTGCTCTGCGCCTTCGGGGTCACCGA < 41bp 0.550780287547874 0.776879317976761 0.38982072 0.19505742 prediction 0.452198060857774 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905093 chr19:50905094 nonsynonymous SNV 0.007 3 22 hm5C_associated_SNPs_116914 1 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr19:50905082-50905104
64251 chrX 13779284 13779284 1 + A G LIHC 13779281 + 13779261 13779301 41 CATCACCCACTGAGTCTAGGCACAGCCTCTCCATCCCTCCT CATCACCCACTGAGTCTAGGCACGGCCTCTCCATCCCTCCT < 41bp 0.551576330302639 0.777662868249005 0.0013362169 0.0068359077 prediction 0.452173075892732 Functional Gain - OFD1 ENSG00000046651 CDS Human protein_coding chrX:13779281 chrX:13779284 nonsynonymous SNV 0.000 2 24 hm5C_associated_SNPs_116919 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:13779253-13779301
64251 chr19 35512877 35512877 1 + C A rs180984713 35512876 + 35512856 35512896 41 CTCCCTCAGCTCCCGCTTCTCCGAACCATCTGTGGACCAGG CTCCCTCAGCTCCCGCTTCTCAGAACCATCTGTGGACCAGG < 41bp 0.600738421366802 0.82681484980765 0.206377 0.64347726 prediction 0.452152856881695 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512876 chr19:35512877 synonymous SNV . 0 22 hm5C_associated_SNPs_116922 0 0 1 IGF2BP2 POSTAR2 ENCODE chr19:35512873-35512938
64251 chr2 27257108 27257108 1 + C T UCEC 27257107 + 27257087 27257127 41 AACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGAAGCACT AACCAGAAGCAGGGCCGCTTCTGCAGCCTGGAGGAAGCACT < 41bp 0.60228251448463 0.82835641979611 0.9027727 0.52614063 prediction 0.452147810622961 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27257107 chr2:27257108 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_116924 0 0 6 DDX24 POSTAR2 ENCODE chr2:27257079-27257111
64251 chr4 8308262 8308262 1 + C A rs563477351 8308258 + 8308238 8308278 41 TCTGGGCTGCCAAGCTTCTTCCCCCCTGACAAACGCCCACC TCTGGGCTGCCAAGCTTCTTCCCCACTGACAAACGCCCACC < 41bp 0.337358905344122 0.726072805055016 0.16415605 0.123359114 prediction 0.452145610110033 Functional Gain - HTRA3 ENSG00000170801 UTR3 Human protein_coding chr4:8308258 chr4:8308262 . . 0 25 hm5C_associated_SNPs_116925 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:8308246-8308352
64251 chr2 152293375 152293375 1 + C T READ 152293374 + 152293354 152293394 41 GTACGGAGCCCCGGGAACTCCCCGAATGAACCTGAGTTCGA GTACGGAGCCCCGGGAACTCCTCGAATGAACCTGAGTTCGA < 41bp 0.593500364032761 0.819572657321276 0.31586635 0.9273029 prediction 0.45214458657703 Functional Gain - RIF1 ENSG00000080345 CDS Human protein_coding chr2:152293374 chr2:152293375 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116926 0 0 20 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:152293340-152293380
64251 chrX 15568079 15568079 1 + T C UCEC 15568077 + 15568057 15568097 41 GCTTTACCGGCCCCACCTGGCATCGGACACCATCTACCAGA GCTTTACCGGCCCCACCTGGCACCGGACACCATCTACCAGA < 41bp 0.608500793927834 0.834565618957964 0.107816935 0.13501075 prediction 0.45212965006026 Functional Gain - BMX ENSG00000102010 CDS Human protein_coding chrX:15568077 chrX:15568079 nonsynonymous SNV 0.989 3 23 hm5C_associated_SNPs_116929 0 0 1 DDX3X POSTAR2 ENCODE chrX:15567989-15568103
64251 chr12 56733728 56733728 1 + C T SKCM 56733727 + 56733707 56733747 41 TGTGTCCTATGTCCTTTCAGCCTGAGGGTCACCACTGGGAG TGTGTCCTATGTCCTTTCAGCTTGAGGGTCACCACTGGGAG < 41bp 0.551084572795563 0.777127377883835 0.04346916 0.08069375 prediction 0.452085610176544 Functional Gain - IL23A ENSG00000110944 CDS Human protein_coding chr12:56733727 chr12:56733728 nonsynonymous SNV 0.970 1 22 hm5C_associated_SNPs_116937 0 0 6 DDX6 POSTAR2 ENCODE chr12:56733723-56733758
64251 chr19 33865476 33865476 1 + A G rs115719755 33865473 + 33865453 33865493 41 AGAGAAGAAATGAAGCACTTCGCAGGCATAGTTGGAGGGAG AGAGAAGAAATGAAGCACTTCGCGGGCATAGTTGGAGGGAG < 41bp 0.53329614767908 0.75933695745251 0.5440255 0.8464978 prediction 0.452081619546861 Functional Gain - CEBPG ENSG00000153879 UTR5 Human protein_coding chr19:33865473 chr19:33865476 . . 0 24 hm5C_associated_SNPs_116938 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:33865449-33865532
64251 chr2 170590398 170590398 1 + C A rs555116862 170590394 + 170590374 170590414 41 AGTTCCCGCGAGTGGCCTCGCGCCCAGACCGTGCGGGGGGC AGTTCCCGCGAGTGGCCTCGCGCCAAGACCGTGCGGGGGGC < 41bp 0.683026804991619 0.909062639502538 0.1328581 0.21327126 prediction 0.452071669021838 Functional Gain - KLHL23 ENSG00000213160 UTR5 Human protein_coding chr2:170590394 chr2:170590398 . . 0 25 hm5C_associated_SNPs_116942 0 0 8 DDX3X POSTAR2 ENCODE chr2:170590390-170590470
64251 chr1 206331180 206331180 1 + C T SKCM 206331179 + 206331159 206331199 41 GTGGGACTGGCCCCAGCAGTCCCCTAAGGAGGGGCCTTGTG GTGGGACTGGCCCCAGCAGTCTCCTAAGGAGGGGCCTTGTG < 41bp 0.467814287204338 0.72603330452873 0.076607466 0.8410255 prediction 0.452066609057459 Functional Gain - CTSE ENSG00000196188 CDS Human protein_coding chr1:206331179 chr1:206331180 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_116943 0 0 1 SND1 POSTAR2 ENCODE chr1:206331142-206331215
64251 chr1 230416953 230416953 1 + A G rs10005 230416950 + 230416930 230416970 41 TTCCTCCCCGGCGGGAGCCCCACATGTGTGCACTGTAGGAC TTCCTCCCCGGCGGGAGCCCCACGTGTGTGCACTGTAGGAC < 41bp 0.494310132193482 0.726024014835534 0.16863093 0.4177741 prediction 0.452048029671068 Functional Gain - GALNT2 ENSG00000224407 ncRNA_intronic Human antisense chr1:230416950 chr1:230416953 . . 0 24 hm5C_associated_SNPs_116947 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr1:230416940-230416960
64251 chr12 56143562 56143562 1 + C A COAD 56143561 + 56143541 56143581 41 TCTGCTGGGCCCTGTTGTACCCCCACCAAGATGTCCCCAAT TCTGCTGGGCCCTGTTGTACCACCACCAAGATGTCCCCAAT < 41bp 0.564692167825008 0.79069957771493 0.13527429 0.20722553 prediction 0.452014819779845 Functional Gain - GDF11 ENSG00000135414 CDS Human protein_coding chr12:56143561 chr12:56143562 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_116949 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:56143544-56143570
64251 chr19 41265485 41265485 1 + C G rs77290177 41265481 + 41265461 41265501 41 TGTGCAAGGCGGGGGAGCCACCCCCGTGGTGGGGGCTGTCC TGTGCAAGGCGGGGGAGCCACCCCGGTGGTGGGGGCTGTCC < 41bp 0.617711998934501 0.843718817790591 0.64315444 0.64429444 prediction 0.452013637712178 Functional Gain - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41265481 chr19:41265485 synonymous SNV . 0 25 hm5C_associated_SNPs_116951 0 0 20 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41265478-41265505
64251 chr1 244217202 244217202 1 + C T SKCM 244217201 + 244217181 244217221 41 CACTGTTCTGGTGGGAGATGCCCAGTTCCGAGCGCACCGAG CACTGTTCTGGTGGGAGATGCTCAGTTCCGAGCGCACCGAG < 41bp 0.507073715121474 0.733073270983342 0.31938618 0.40399104 prediction 0.451999111723736 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244217201 chr1:244217202 synonymous SNV . 0 22 hm5C_associated_SNPs_116953 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:244217154-244217205
64251 chr1 1431123 1431123 1 + C T LUSC 1431122 + 1431102 1431142 41 TGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAG TGGATGGGGACTGGGCTGTGCTCAGGGCCTCTGTCCCCCAG < 41bp 0.500097461595994 0.72607112240964 0.11414933 0.15383947 prediction 0.45194732162729 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1431122 chr1:1431123 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_116965 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1431088-1431126
64251 chr19 39915660 39915660 1 + C T LGG 39915659 + 39915639 39915679 41 GCCTGGCTCGGCGGCAGGGGCCTGGGGGAGGGGCCCCCGCA GCCTGGCTCGGCGGCAGGGGCTTGGGGGAGGGGCCCCCGCA < 41bp 0.506856086075003 0.732825673475427 0.9121054 0.90157557 prediction 0.451939174800848 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915659 chr19:39915660 nonsynonymous SNV 0.959 2 22 hm5C_associated_SNPs_116966 0 0 1 EIF3H POSTAR2 ENCODE chr19:39915627-39915671
64251 chr14 39650346 39650346 1 + C A STAD 39650342 + 39650322 39650362 41 CTGAGCCTGTGGCTCAACCTCAGCCTCAGTCTCAGCCCCAG CTGAGCCTGTGGCTCAACCTCAGCATCAGTCTCAGCCCCAG < 41bp 0.709080423669074 0.935049311592056 0.26979548 0.20477644 prediction 0.451937775845964 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650342 chr14:39650346 nonsynonymous SNV 0.083 1 25 hm5C_associated_SNPs_116967 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:39650248-39650376
64251 chr1 150469060 150469060 1 + T C LGG 150469058 + 150469038 150469078 41 ATTGCTGAGGGTCTGGGAAGCATGGAGGGAGGAAGCAGAAT ATTGCTGAGGGTCTGGGAAGCACGGAGGGAGGAAGCAGAAT < 41bp 0.5856032171227 0.811571784482967 0.79054075 0.77497315 prediction 0.451937134720534 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150469058 chr1:150469060 nonsynonymous SNV 0.144 0 23 hm5C_associated_SNPs_116968 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:150469036-150469072
64251 chr6 160525890 160525890 1 + C T LUSC 160525889 + 160525869 160525909 41 AGGATGAGGTTCTGACCATCCCAGAGGTGAAAGTTCACTCG AGGATGAGGTTCTGACCATCCTAGAGGTGAAAGTTCACTCG < 41bp 0.542028980433368 0.767988154745172 0.8919234 0.4333641 prediction 0.451918348623608 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160525889 chr6:160525890 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_116971 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:160525867-160525895
64251 chr7 100465777 100465777 1 + C A rs145233601 100465776 + 100465756 100465796 41 TCGCCCTGGAAGCCTGGACGCCGAGATAGACTTGCTGAGCA TCGCCCTGGAAGCCTGGACGCAGAGATAGACTTGCTGAGCA < 41bp 0.587187142608834 0.813139056007306 0.37586504 0.9262505 prediction 0.451903826796945 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100465776 chr7:100465777 synonymous SNV . 0 22 hm5C_associated_SNPs_116974 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:100465744-100465781
64251 chr17 41571142 41571142 1 + C T SKCM 41571141 + 41571121 41571161 41 AGGAGACCTCAATGCGGAATCCTGATAGACCCACTCACTTG AGGAGACCTCAATGCGGAATCTTGATAGACCCACTCACTTG < 41bp 0.591490179966081 0.81743751186361 0.30012822 0.33749127 prediction 0.451894663795057 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41571141 chr17:41571142 nonsynonymous SNV 0.883 1 22 hm5C_associated_SNPs_116975 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr17:41571125-41571161
64251 chr15 22929856 22929856 1 + T C PRAD 22929854 + 22929834 22929874 41 GTGCTGGACGAGCTGAAGAACATGAAGTGCAGTGTGAAGAA GTGCTGGACGAGCTGAAGAACACGAAGTGCAGTGTGAAGAA < 41bp 0.62224706511175 0.848186299261655 0.10847807 0.06556776 prediction 0.451878468299811 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22929854 chr15:22929856 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_116980 0 0 8 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:22929841-22929861
64251 chr19 49377161 49377161 1 + C T SKCM 49377160 + 49377140 49377180 41 CCAGCACTTGGGTGTCTTGCCCAGGGGAGGAAGAGAATCAA CCAGCACTTGGGTGTCTTGCCTAGGGGAGGAAGAGAATCAA < 41bp 0.539022434730889 0.764958023946793 0.85194576 0.3866276 prediction 0.451871178431808 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377160 chr19:49377161 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_116981 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:49377138-49377166
64251 chr9 129642444 129642444 1 + C A THCA 129642440 + 129642420 129642460 41 CCCAGCTGTTCCGACAGCTCCTCCCTGGGTGACGATGGGTA CCCAGCTGTTCCGACAGCTCCTCCATGGGTGACGATGGGTA < 41bp 0.281699994391879 0.725934536776104 0.15826488 0.9679972 prediction 0.451869073552209 Functional Gain - ZBTB34 ENSG00000177125 CDS Human protein_coding chr9:129642440 chr9:129642444 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_116982 0 0 1 DDX6 POSTAR2 ENCODE chr9:129642405-129642450
64251 chr8 11616349 11616349 1 + C A rs78334561 11616348 + 11616328 11616368 41 ATCTGAGAACAAGCGGAGGGCCGGGCCCTGGGACCCCTGCT ATCTGAGAACAAGCGGAGGGCAGGGCCCTGGGACCCCTGCT < 41bp 0.581957625975924 0.807891044608231 0.87152886 0.9008614 prediction 0.451866837264614 Functional Gain - GATA4 ENSG00000136574 UTR3 Human protein_coding chr8:11616348 chr8:11616349 . . 0 22 hm5C_associated_SNPs_116983 0 0 2 FAM120A POSTAR2 ENCODE chr8:11616321-11616377
64251 chr5 137684076 137684076 1 + A G rs182881841 137684073 + 137684053 137684093 41 AGGGCTGGCACCAGTGGAAACACATACTGAAGCTGCCACCA AGGGCTGGCACCAGTGGAAACACGTACTGAAGCTGCCACCA < 41bp 0.490636726779388 0.7259095069485 0.078430176 0.14168325 prediction 0.451819013896999 Functional Gain - FAM53C ENSG00000249971 ncRNA_intronic Human antisense chr5:137684073 chr5:137684076 . . 0 24 hm5C_associated_SNPs_116991 0 0 21 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:137684011-137684081
64251 chr8 79627512 79627512 1 + C T PAAD 79627511 + 79627491 79627531 41 GTTTGGCAAGAAATCCTGCCCCAGGTGTGCTTACAAACAAA GTTTGGCAAGAAATCCTGCCCTAGGTGTGCTTACAAACAAA < 41bp 0.481457207410506 0.725906082684195 0.48639375 0.16352227 prediction 0.451812165368391 Functional Gain - ZC2HC1A ENSG00000104427 CDS Human protein_coding chr8:79627511 chr8:79627512 nonsynonymous SNV 0.417 1 22 hm5C_associated_SNPs_116993 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:79627497-79627521
64251 chr1 150316934 150316934 1 + C T SKCM 150316933 + 150316913 150316953 41 GCATGAAGAGGCCAACGCTGCCCGAAAACTCACAGCAGAAC GCATGAAGAGGCCAACGCTGCTCGAAAACTCACAGCAGAAC < 41bp 0.606994209840484 0.832898201569144 0.114705145 0.30105853 prediction 0.451807983457321 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150316933 chr1:150316934 synonymous SNV . 0 22 hm5C_associated_SNPs_116995 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:150316895-150316939
64251 chr6 7845477 7845477 1 + C T UCEC 7845476 + 7845456 7845496 41 GTGGTGACGGCTGCAGAATTCCGCATCTACAAGGACTGTGT GTGGTGACGGCTGCAGAATTCTGCATCTACAAGGACTGTGT < 41bp 0.593258698494408 0.819160315239173 0.41661346 0.44170272 prediction 0.451803233489529 Functional Gain - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7845476 chr6:7845477 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_116997 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr6:7845460-7845480
64251 chr9 138395756 138395756 1 + T C SKCM 138395754 + 138395734 138395774 41 AACATCCCCACAGTGGGCATCGTGGACACCAACTGCAACCC AACATCCCCACAGTGGGCATCGCGGACACCAACTGCAACCC < 41bp 0.588520589625131 0.814418324831427 0.36812285 0.84582305 prediction 0.451795470412593 Functional Gain - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395754 chr9:138395756 nonsynonymous SNV 0.991 4 23 hm5C_associated_SNPs_117000 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395719-138395836
64251 chr6 116600879 116600879 1 - G T LUSC 116600880 - 116600860 116600900 41 CAGTACCTGAGGCTCCGCGACCAAAGCGAGGCGACACAGGT CAGTACCTGAGGCTCCGCGACAAAAGCGAGGCGACACAGGT < 41bp 0.476853747746496 0.725892881362108 0.10831943 0.17432201 prediction 0.451785762724217 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600880 chr6:116600879 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_117005 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:116600860-116600880
64251 chr7 121944266 121944266 1 - G A SKCM 121944267 - 121944247 121944287 41 TCGTCGATCCCCTGCATGATCCCCTTCGTGCCTGTGGCCTA TCGTCGATCCCCTGCATGATCTCCTTCGTGCCTGTGGCCTA < 41bp 0.56030004759112 0.786192671275092 0.009143233 0.028946668 prediction 0.451785247367944 Functional Gain - FEZF1 ENSG00000128610 CDS Human protein_coding chr7:121944267 chr7:121944266 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_117007 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:121944252-121944290
64251 chr19 19309965 19309965 1 + C T UCEC 19309964 + 19309944 19309984 41 CCTCCCCTCTCCTTTGCAGCCCGAGGCGCTGACCTCACCAC CCTCCCCTCTCCTTTGCAGCCTGAGGCGCTGACCTCACCAC < 41bp 0.555221603245192 0.781112286209261 0.5455327 0.41594112 prediction 0.451781365928137 Functional Gain - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19309964 chr19:19309965 stopgain 0.791 0 22 hm5C_associated_SNPs_117009 0 0 1 SF3B4 POSTAR2 ENCODE chr19:19309910-19309984
64251 chr17 28511912 28511912 1 + T G LUAD 28511909 + 28511889 28511929 41 CCTAGTGAAGAAAGAGGGCACAGTACCAGGCACCACACGAA CCTAGTGAAGAAAGAGGGCACAGGACCAGGCACCACACGAA < 41bp 0.695720939234279 0.921595573720179 0.10949004 0.38899451 prediction 0.4517492689718 Functional Gain - NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28511909 chr17:28511912 nonsynonymous SNV 0.093 0 24 hm5C_associated_SNPs_117015 0 0 1 TRA2A POSTAR2 ENCODE chr17:28511886-28511950
64251 chr11 118506209 118506209 1 + C T rs140448240 118506208 + 118506188 118506228 41 GGAGGAGGAGCGCGAGCTGGCCGGCCAGGGGCTGCTCCGGA GGAGGAGGAGCGCGAGCTGGCTGGCCAGGGGCTGCTCCGGA < 41bp 0.511760957669565 0.737627816013719 0.4444147 0.29701215 prediction 0.451733716688308 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118506208 chr11:118506209 synonymous SNV . 0 22 hm5C_associated_SNPs_117019 0 0 8 BUD13 POSTAR2 ENCODE chr11:118506198-118506282
64251 chr17 4058094 4058094 1 + C T rs144989131 4058093 + 4058073 4058113 41 TGCAAGAGAAGCAGACATTCCCGCCGTGCAACGCGGAGTGG TGCAAGAGAAGCAGACATTCCTGCCGTGCAACGCGGAGTGG < 41bp 0.470490806125484 0.725858981014909 0.39608282 0.42584604 prediction 0.451717962029819 Functional Gain - CYB5D2 ENSG00000167740 CDS Human protein_coding chr17:4058093 chr17:4058094 nonsynonymous SNV 0.487 5 22 hm5C_associated_SNPs_117023 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:4058076-4058109
64251 chr16 29816292 29816292 1 + C T STAD 29816291 + 29816271 29816311 41 GCAGTCTTCAGCGCATTGGCCCGAAGAAGGCCCAGCTAATC GCAGTCTTCAGCGCATTGGCCTGAAGAAGGCCCAGCTAATC < 41bp 0.57780918076356 0.80365948836794 0.30484638 0.2543096 prediction 0.451700615208759 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816291 chr16:29816292 nonsynonymous SNV 0.960 1 22 hm5C_associated_SNPs_117025 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:29816274-29816298
64251 chr11 129980502 129980502 1 + C T STAD 129980501 + 129980481 129980521 41 GTTAGTATTGACAACTGGTGCCGGAGGGACAAAAAGCAATG GTTAGTATTGACAACTGGTGCTGGAGGGACAAAAAGCAATG < 41bp 0.477582696003337 0.725841567865477 0.7928664 0.46779937 prediction 0.451683135730955 Functional Gain - APLP2 ENSG00000084234 CDS Human protein_coding chr11:129980501 chr11:129980502 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_117029 0 0 20 LIN28A POSTAR2 GSE39873,GSM980593 chr11:129980440-129980520
64251 chr3 185332506 185332506 1 + A G UCEC 185332503 + 185332483 185332523 41 CAAAGAGAGGGACAGAAGAACGGACGATCTCCTTGAACTTA CAAAGAGAGGGACAGAAGAACGGGCGATCTCCTTGAACTTA < 41bp 0.487308991250924 0.725838864251943 0.29291958 0.84857696 prediction 0.451677728503887 Functional Gain - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185332503 chr3:185332506 nonsynonymous SNV 0.928 2 24 hm5C_associated_SNPs_117030 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:185332471-185332521
64251 chr16 67578667 67578667 1 + C T PAAD 67578666 + 67578646 67578686 41 GAGCGGCTGCTGCGGGAAGCCCGAGTACTGGAGGCAGTATG GAGCGGCTGCTGCGGGAAGCCTGAGTACTGGAGGCAGTATG < 41bp 0.534436577650429 0.760272331805346 0.84636605 0.20820224 prediction 0.451671508309834 Functional Gain - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67578666 chr16:67578667 stopgain 0.480 0 22 hm5C_associated_SNPs_117031 0 0 1 PPIG POSTAR2 ENCODE chr16:67578663-67578726
64251 chr20 21329051 21329051 1 + A G READ 21329048 + 21329028 21329068 41 ATTTTCTACCTCCATCATGGCGGAAGCTCATGAGTGATCCT ATTTTCTACCTCCATCATGGCGGGAGCTCATGAGTGATCCT < 41bp 0.539430581372551 0.765258289226604 0.24407789 0.7989943 prediction 0.451655415708106 Functional Gain - XRN2 ENSG00000088930 CDS Human protein_coding chr20:21329048 chr20:21329051 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_117034 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr20:21329027-21329069
64251 chr2 63826370 63826370 1 + C T UCEC 63826369 + 63826349 63826389 41 TCCAAGTCAGCTCCATCCATCCCCAAGGAGAACTTCAGTTG TCCAAGTCAGCTCCATCCATCTCCAAGGAGAACTTCAGTTG < 41bp 0.626420338382414 0.852228679976625 0.09316471 0.93951166 prediction 0.451616683188422 Functional Gain - MDH1 ENSG00000014641 CDS Human protein_coding chr2:63826369 chr2:63826370 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_117047 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:63826336-63826395
64251 chr16 8866684 8866684 1 + C T rs149855547 8866683 + 8866663 8866703 41 GAAAAAGAAGAAGACGGTGGCCGGGATCATCGTGGAGCCCA GAAAAAGAAGAAGACGGTGGCTGGGATCATCGTGGAGCCCA < 41bp 0.553055609605619 0.778855052649274 0.8678793 0.6250292 prediction 0.45159888608731 Functional Gain - ABAT ENSG00000183044 CDS Human protein_coding chr16:8866683 chr16:8866684 synonymous SNV . 0 22 hm5C_associated_SNPs_117051 1 0 4 BUD13 POSTAR2 ENCODE chr16:8866625-8866720
64251 chr6 4892501 4892501 1 + C T LUSC 4892500 + 4892480 4892520 41 GGTCGGAGCTTTATTGGGCCCCGGTGCCGAGAGGGCCAGGA GGTCGGAGCTTTATTGGGCCCTGGTGCCGAGAGGGCCAGGA < 41bp 0.53624262716394 0.762030083846756 0.13881367 0.15957072 prediction 0.451574913365631 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892500 chr6:4892501 synonymous SNV . 0 22 hm5C_associated_SNPs_117054 0 0 14 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:4892472-4892502
64251 chr2 106498299 106498299 1 + C T SKCM 106498298 + 106498278 106498318 41 CGGGGCCAGGTGGGCCTCGTCCCCAAAAACTACGTGGTGGT CGGGGCCAGGTGGGCCTCGTCTCCAAAAACTACGTGGTGGT < 41bp 0.606027800845101 0.831812455455745 0.18978342 0.97051954 prediction 0.451569309221287 Functional Gain - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106498298 chr2:106498299 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_117055 0 0 1 LIN28B POSTAR2 ENCODE chr2:106498263-106498321
64251 chr17 40997688 40997688 1 + C T SKCM 40997687 + 40997667 40997707 41 AGGATTTTTGATGTTCGGTTCCAGGGTGAGCGAATAGCCTA AGGATTTTTGATGTTCGGTTCTAGGGTGAGCGAATAGCCTA < 41bp 0.494144868432269 0.725781114707042 0.8648813 0.45875305 prediction 0.451562229414085 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:40997687 chr17:40997688 stopgain 0.193 0 22 hm5C_associated_SNPs_117060 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:40997646-40997804
64251 chr22 50956587 50956587 1 + C T LUAD 50956586 + 50956566 50956606 41 CAGGGTGAGGTCCTGGCCAGCCGGAAGGATTTCAGGATGAA CAGGGTGAGGTCCTGGCCAGCTGGAAGGATTTCAGGATGAA < 41bp 0.576217978232451 0.801990146638417 0.41000536 0.4122927 prediction 0.451544336811932 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50956586 chr22:50956587 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_117065 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917662 chr22:50956580-50956600
64251 chr11 11971470 11971470 1 + A G BLCA 11971467 + 11971447 11971487 41 TCTGCTAGATGCTGTGTTTGCTAAAGGAATGACTGTACGGC TCTGCTAGATGCTGTGTTTGCTAGAGGAATGACTGTACGGC < 41bp 0.50652147571548 0.73228057567029 0.1626201 0.4371752 prediction 0.451518199909621 Functional Gain - USP47 ENSG00000170242 CDS Human protein_coding chr11:11971467 chr11:11971470 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_117072 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:11971433-11971473
64251 chr17 78075384 78075384 1 + C G rs144639114 78075380 + 78075360 78075400 41 CCTCTGCGCGCCCCCGGGCACGACCCCGGAGTCTCCGCGGG CCTCTGCGCGCCCCCGGGCACGACGCCGGAGTCTCCGCGGG < 41bp 0.614206455852393 0.839942504379386 0.26328 0.37893733 prediction 0.451472097053986 Functional Gain - GAA ENSG00000171298 UTR5 Human protein_coding chr17:78075380 chr17:78075384 . . 0 25 hm5C_associated_SNPs_117083 2 0 2 DDX3X POSTAR2 ENCODE chr17:78075381-78075421
64251 chr8 37632983 37632983 1 + C A ACC 37632982 + 37632962 37633002 41 GGCATGATCTTAGTCAAGGACCAAATCCAGACTTCCAGGTA GGCATGATCTTAGTCAAGGACAAAATCCAGACTTCCAGGTA < 41bp 0.462280953350412 0.72573557546329 0.2474266 0.2943738 prediction 0.451471150926581 Functional Gain - PLPBP ENSG00000147471 CDS Human protein_coding chr8:37632982 chr8:37632983 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_117084 0 0 2 BUD13 POSTAR2 ENCODE chr8:37632962-37633021
64251 chr3 14526396 14526396 1 + C T SKCM 14526395 + 14526375 14526415 41 AGAGTCAAGTACCTGCTGACCCCAAGGGAACCCAACCGCTG AGAGTCAAGTACCTGCTGACCTCAAGGGAACCCAACCGCTG < 41bp 0.464559818176965 0.725733848113904 0.22498867 0.16565773 prediction 0.451467696227808 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14526395 chr3:14526396 nonsynonymous SNV 0.921 0 22 hm5C_associated_SNPs_117085 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:14526387-14526420
64251 chr4 44702328 44702328 1 + T G rs184537530 44702326 + 44702306 44702346 41 CAAAGAACTCAAAGTCTTCACATGAAACAAATGCATAAATG CAAAGAACTCAAAGTCTTCACAGGAAACAAATGCATAAATG < 41bp 0.590102129735744 0.815829292974333 0.13335088 0.1979633 prediction 0.451454326477178 Functional Gain - GUF1 ENSG00000151806 UTR3 Human protein_coding chr4:44702326 chr4:44702328 . . 0 23 hm5C_associated_SNPs_117088 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:44702294-44702329
64251 chr14 62551076 62551076 1 + C T SKCM 62551075 + 62551055 62551095 41 ATGATCAAAGGCAGCCATTTCCGAAACCTCGCTGTTAACCG ATGATCAAAGGCAGCCATTTCTGAAACCTCGCTGTTAACCG < 41bp 0.578681036825794 0.804401357318716 0.34761655 0.11893502 prediction 0.451440640985843 Functional Gain - SYT16 ENSG00000139973 CDS Human protein_coding chr14:62551075 chr14:62551076 stopgain 1.000 1 22 hm5C_associated_SNPs_117089 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:62551060-62551092
64251 chr19 30936627 30936627 1 + C A LUAD 30936623 + 30936603 30936643 41 GAGGACAGCCCGCACCCCTCCTCGCCATCCTCCTCAGGTAG GAGGACAGCCCGCACCCCTCCTCGACATCCTCCTCAGGTAG < 41bp 0.307623969087551 0.725710326534076 0.35036156 0.62106293 prediction 0.451420653068152 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936623 chr19:30936627 nonsynonymous SNV 0.902 4 25 hm5C_associated_SNPs_117092 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30936611-30936639
64251 chr12 109536034 109536034 1 + C G rs3219209 109536030 + 109536010 109536050 41 GGAAGCCATAGGGCGCCTCCCAGCCCGTCTCCCCGCTCCAG GGAAGCCATAGGGCGCCTCCCAGCGCGTCTCCCCGCTCCAG < 41bp 0.601166269094487 0.82687444942439 0.0872924 0.80082494 prediction 0.451416360659806 Functional Gain - UNG ENSG00000076248 UTR5 Human protein_coding chr12:109536030 chr12:109536034 . . 0 25 hm5C_associated_SNPs_117094 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:109536020-109536058
64251 chr11 1482006 1482006 1 + C G rs572502940 1482002 + 1481982 1482022 41 ACTGACAGCGGCTGCCTCGCCGCCCGCCGCCCGCCCTGCCC ACTGACAGCGGCTGCCTCGCCGCCGGCCGCCCGCCCTGCCC < 41bp 0.614229264122148 0.83993646401311 0.11249712 0.7706604 prediction 0.451414399781924 Functional Gain - BRSK2 ENSG00000174672 UTR3 Human protein_coding chr11:1482002 chr11:1482006 . . 0 25 hm5C_associated_SNPs_117095 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:1481995-1482026
64251 chr2 74076576 74076576 1 + C T UCEC 74076575 + 74076555 74076595 41 TTAGCCAGTGCCAACACTGCCCGGGGAGTGGAGACATGTGG TTAGCCAGTGCCAACACTGCCTGGGGAGTGGAGACATGTGG < 41bp 0.568644092448264 0.794346194101883 0.6433502 0.34600145 prediction 0.451404203307239 Functional Gain - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74076575 chr2:74076576 nonsynonymous SNV 0.940 4 22 hm5C_associated_SNPs_117096 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:74076538-74076587
64251 chr3 12447402 12447402 1 + C T SKCM 12447401 + 12447381 12447421 41 CCATCAGGTTTGGGCGGATGCCACAGGCCGAGAAGGAGAAG CCATCAGGTTTGGGCGGATGCTACAGGCCGAGAAGGAGAAG < 41bp 0.579080686550717 0.804762154368213 0.78070056 0.8884701 prediction 0.451362935634991 Functional Gain - PPARG ENSG00000132170 CDS Human protein_coding chr3:12447401 chr3:12447402 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_117105 0 0 1 U2AF2 POSTAR2 ENCODE chr3:12447364-12447421
64251 chr18 56363619 56363619 1 + C T SKCM 56363618 + 56363598 56363638 41 GAATAAAGATTACTGTAAACCCAGAGTCAAAGGCAGTCTTG GAATAAAGATTACTGTAAACCTAGAGTCAAAGGCAGTCTTG < 41bp 0.546881565966712 0.772562395056626 0.3754837 0.22175312 prediction 0.451361658179828 Functional Gain - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56363618 chr18:56363619 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_117106 0 0 1 U2AF2 POSTAR2 ENCODE chr18:56363593-56363679
64251 chr1 246810663 246810663 1 + C T SKCM 246810662 + 246810642 246810682 41 CAGCAGGGAGCCCGTCTGGGCCAGACTCTTCTGAGGATGCT CAGCAGGGAGCCCGTCTGGGCTAGACTCTTCTGAGGATGCT < 41bp 0.48213626857726 0.725675713597796 0.09201926 0.05496335 prediction 0.451351427195592 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810662 chr1:246810663 nonsynonymous SNV 0.688 0 22 hm5C_associated_SNPs_117109 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:246810649-246810688
64251 chr2 242755766 242755766 1 + C T SKCM 242755765 + 242755745 242755785 41 TACCGCGTGCCCTCGCTGCTCCCCGTGCCCCCCGGGCCCAC TACCGCGTGCCCTCGCTGCTCTCCGTGCCCCCCGGGCCCAC < 41bp 0.57133680784331 0.797010363238495 0.16614038 0.29137582 prediction 0.45134711079037 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242755765 chr2:242755766 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_117110 0 0 1 DDX55 POSTAR2 ENCODE chr2:242755710-242755855
64251 chr18 77067118 77067118 1 + A G STAD 77067115 + 77067095 77067135 41 TGAAAGCCATCGTGCTGTGTCACAACGTGACCCCCGTGTAT TGAAAGCCATCGTGCTGTGTCACGACGTGACCCCCGTGTAT < 41bp 0.557191517260769 0.782861675186794 0.080020785 0.19001013 prediction 0.45134031585205 Functional Gain - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77067115 chr18:77067118 nonsynonymous SNV 0.136 4 24 hm5C_associated_SNPs_117111 0 0 2 EIF3H POSTAR2 ENCODE chr18:77067059-77067228
64251 chr22 47189485 47189485 1 + C A LIHC 47189481 + 47189461 47189501 41 CCAGGAGTTTGAGAGCAATACCAGCGATGCCTGGGACGCTG CCAGGAGTTTGAGAGCAATACCAGAGATGCCTGGGACGCTG < 41bp 0.337973885311204 0.725669523970694 0.8586961 0.8970148 prediction 0.451339047941387 Functional Gain - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47189481 chr22:47189485 nonsynonymous SNV 0.912 4 25 hm5C_associated_SNPs_117113 0 0 4 GRWD1 POSTAR2 ENCODE chr22:47189455-47189583
64251 chr13 100637338 100637338 1 + C A BLCA 100637334 + 100637314 100637354 41 TGTGCGACAAGTCCTACACGCACCCCAGCTCGCTGCGGAAG TGTGCGACAAGTCCTACACGCACCACAGCTCGCTGCGGAAG < 41bp 0.297507258300484 0.725669016933555 0.041148156 0.041826814 prediction 0.451338033867111 Functional Gain - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100637334 chr13:100637338 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_117114 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:100637266-100637339
64251 chr16 88779192 88779192 1 + C A rs140091320 88779188 + 88779168 88779208 41 CAAGGGGAGGAACAGCCACCCCAGCCCCCGCTGGACCCCCA CAAGGGGAGGAACAGCCACCCCAGACCCCGCTGGACCCCCA < 41bp 0.331795813524354 0.725647903495733 0.22599167 0.25674295 prediction 0.451295806991465 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779188 chr16:88779192 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_117123 0 0 1 FMR1 POSTAR2 ENCODE chr16:88779102-88779219
64251 chr15 39877738 39877738 1 + A G KIRP 39877735 + 39877715 39877755 41 CTGCTCCAATGCCACAGTTCCTGATGGAGAATGCTGTCCTC CTGCTCCAATGCCACAGTTCCTGGTGGAGAATGCTGTCCTC < 41bp 0.481186963787853 0.725647222663929 0.17981735 0.44698903 prediction 0.451294445327857 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39877735 chr15:39877738 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_117124 0 0 3 RPS3 POSTAR2 ENCODE chr15:39877734-39877764
64251 chr11 67257556 67257556 1 + C G rs2276020 67257552 + 67257532 67257572 41 GCAGGACCCATGGGCCATGACAGACGAAGAGAAGGCAAAGG GCAGGACCCATGGGCCATGACAGAGGAAGAGAAGGCAAAGG < 41bp 0.627788043229155 0.85343121933648 0.32352957 0.85806084 prediction 0.45128635221465 Functional Gain - AIP ENSG00000110711 CDS Human protein_coding chr11:67257552 chr11:67257556 nonsynonymous SNV 0.965 2 25 hm5C_associated_SNPs_117126 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr11:67257555-67257556
64251 chr15 39874116 39874116 1 + C A SARC 39874115 + 39874095 39874135 41 ATGCATGTGTGTGGCACCAACCGCATTCCAGGTGAGTTTGT ATGCATGTGTGTGGCACCAACAGCATTCCAGGTGAGTTTGT < 41bp 0.592834325400486 0.818475892867667 0.17726964 0.21905431 prediction 0.451283134934363 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874115 chr15:39874116 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_117127 0 0 3 DDX6 POSTAR2 ENCODE chr15:39874096-39874125
64251 chr16 1819837 1819837 1 + C G rs565711174 1819836 + 1819816 1819856 41 TTGCCCGCTGTGGCCTGCTTCCAGGGAGCAACAGAGAGGCC TTGCCCGCTGTGGCCTGCTTCGAGGGAGCAACAGAGAGGCC < 41bp 0.444598044524754 0.72562747576491 0.8316149 0.9177234 prediction 0.451254951529819 Functional Gain - MAPK8IP3 ENSG00000138834 UTR3 Human protein_coding chr16:1819836 chr16:1819837 . . 0 22 hm5C_associated_SNPs_117129 0 0 2 EIF3H POSTAR2 ENCODE chr16:1819817-1819845
64251 chr17 79637320 79637320 1 + C A SKCM 79637319 + 79637299 79637339 41 GAGGAGCCCGACATCGCAGTCCCCAAGTTCAAACAGAGGAA GAGGAGCCCGACATCGCAGTCACCAAGTTCAAACAGAGGAA < 41bp 0.467981271948802 0.725612862410443 0.19391832 0.25168538 prediction 0.451225724820887 Functional Gain - CCDC137 ENSG00000185298 CDS Human protein_coding chr17:79637319 chr17:79637320 nonsynonymous SNV 0.727 5 22 hm5C_associated_SNPs_117139 0 0 9 GRWD1 POSTAR2 ENCODE chr17:79637259-79637324
64251 chr4 20620642 20620642 1 + C G rs186108791 20620638 + 20620618 20620658 41 AGGTGTGTGTCCTAAACACACTCCCGGCAGCTCTGTCTTTG AGGTGTGTGTCCTAAACACACTCCGGGCAGCTCTGTCTTTG < 41bp 0.438435431378806 0.725609108186335 0.03341621 0.07949534 prediction 0.451218216372669 Functional Gain - SLIT2 ENSG00000145147 UTR3 Human protein_coding chr4:20620638 chr4:20620642 . . 0 25 hm5C_associated_SNPs_117142 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:20620628-20620662
64251 chr6 16274725 16274725 1 + C T PCPG 16274724 + 16274704 16274744 41 TCATCAAAGTGGGAGTTGGACCAGGTAAGACTTGTTAGGAG TCATCAAAGTGGGAGTTGGACTAGGTAAGACTTGTTAGGAG < 41bp 0.550389983567125 0.775993807151325 0.8466933 0.25605434 prediction 0.4512076471684 Functional Gain - GMPR ENSG00000137198 CDS Human protein_coding chr6:16274724 chr6:16274725 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_117144 0 0 3 BUD13 POSTAR2 ENCODE chr6:16274690-16274726
64251 chr16 11769893 11769893 1 + C G rs8191327 11769892 + 11769872 11769912 41 CACCCCCAAAGTGCTGCCAGCCGAGGAAGCCCCCAGCACTG CACCCCCAAAGTGCTGCCAGCGGAGGAAGCCCCCAGCACTG < 41bp 0.482848720301138 0.725600603390907 0.8283948 0.9105477 prediction 0.451201206781814 Functional Gain - SNN ENSG00000184602 UTR5 Human protein_coding chr16:11769892 chr16:11769893 . . 0 22 hm5C_associated_SNPs_117146 0 0 1 DDX3X POSTAR2 ENCODE chr16:11769857-11769905
64251 chr18 9533743 9533743 1 + C A SKCM 9533742 + 9533722 9533762 41 TGAGACTGAGGAGTACTCCTCCGAGAGCGAGAGCGAGAGTG TGAGACTGAGGAGTACTCCTCAGAGAGCGAGAGCGAGAGTG < 41bp 0.45768094742002 0.72559918902789 0.4739917 0.8762417 prediction 0.451198378055781 Functional Gain - RALBP1 ENSG00000017797 CDS Human protein_coding chr18:9533742 chr18:9533743 synonymous SNV . 0 22 hm5C_associated_SNPs_117147 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr18:9533742-9533743
64251 chr2 272128 272128 1 + C T SKCM 272127 + 272107 272147 41 GCATGAAGAGGCACGGCATTCCCATGAGCCACGTTGCCCGG GCATGAAGAGGCACGGCATTCTCATGAGCCACGTTGCCCGG < 41bp 0.560292340046567 0.785878998860746 0.10685533 0.097151846 prediction 0.451173317628359 Functional Gain - ACP1 ENSG00000143727 CDS Human protein_coding chr2:272127 chr2:272128 nonsynonymous SNV 0.726 0 22 hm5C_associated_SNPs_117150 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr2:272108-272132
64251 chr3 49753345 49753345 1 + C A COAD 49753341 + 49753321 49753361 41 ACCTGCTTTGACCTCTCGGTCAGCCTGCTGCGTGTCTTGGA ACCTGCTTTGACCTCTCGGTCAGCATGCTGCGTGTCTTGGA < 41bp 0.306202229021876 0.72558505488524 0.27416492 0.29424345 prediction 0.451170109770481 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49753341 chr3:49753345 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_117152 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:49753318-49753356
64251 chr7 100731562 100731562 1 + C T SKCM 100731561 + 100731541 100731581 41 GCGAGAGGCCGAGATCCTCTCCCTGGAAGGGGCGATCGCAC GCGAGAGGCCGAGATCCTCTCTCTGGAAGGGGCGATCGCAC < 41bp 0.528606352083884 0.754188476425557 0.18683013 0.2529899 prediction 0.451164248683345 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731561 chr7:100731562 synonymous SNV . 0 22 hm5C_associated_SNPs_117154 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100731557-100731580
64251 chr7 148950880 148950880 1 + C G LUAD 148950879 + 148950859 148950899 41 AGCAGCAGAACTGTGGGCTGCCCGAAGCAGAAATCTCATAG AGCAGCAGAACTGTGGGCTGCGCGAAGCAGAAATCTCATAG < 41bp 0.651315132985288 0.876895654228325 0.2562683 0.38680336 prediction 0.451161042486074 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148950879 chr7:148950880 nonsynonymous SNV 0.027 0 22 hm5C_associated_SNPs_117155 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr7:148950861-148950883
64251 chr7 99662201 99662201 1 + A G rs186209214 99662198 + 99662178 99662218 41 TGTAGCAAGTCCAATCTTTCCAAACATCAGCGAGTCCACAC TGTAGCAAGTCCAATCTTTCCAAGCATCAGCGAGTCCACAC < 41bp 0.492110112833887 0.725578154078302 0.15302148 0.1867136 prediction 0.451156308156604 Functional Gain - ZSCAN21 ENSG00000166529 CDS Human protein_coding chr7:99662198 chr7:99662201 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_117156 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:99662186-99662207
64251 chr19 18054730 18054730 1 + C G rs1052575 18054726 + 18054706 18054746 41 ACCCCATCCCCTCCCATCCCCCGGCGCGTGTGTGTAGAGCC ACCCCATCCCCTCCCATCCCCCGGGGCGTGTGTGTAGAGCC < 41bp 0.471929707824374 0.725570743635968 0.22906885 0.70996785 prediction 0.451141487271935 Functional Gain - CCDC124 ENSG00000007080 UTR3 Human protein_coding chr19:18054726 chr19:18054730 . . 0 25 hm5C_associated_SNPs_117160 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:18054609-18054794
64251 chr11 71821156 71821156 1 - G A LUSC 71821157 - 71821137 71821177 41 TGAATGACTACAATGAGTCACCGGATGATGGAGAGGTCAAT TGAATGACTACAATGAGTCACTGGATGATGGAGAGGTCAAT < 41bp 0.57861071130546 0.804179694768461 0.17570475 0.05041787 prediction 0.451137966926002 Functional Gain - ANAPC15 ENSG00000110200 CDS Human protein_coding chr11:71821157 chr11:71821156 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_117161 1 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr11:71821150-71821234
64251 chr17 33326346 33326346 1 + C A UCEC 33326345 + 33326325 33326365 41 GGCGGCATGATGTCAATCTTCCTCATGGGCTGCTACGACCC GGCGGCATGATGTCAATCTTCATCATGGGCTGCTACGACCC < 41bp 0.578792237468504 0.804345631412027 0.017256677 0.038544476 prediction 0.451106787887048 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33326345 chr17:33326346 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117170 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:33326336-33326358
64251 chr10 86259661 86259661 1 + T C SKCM 86259659 + 86259639 86259679 41 TTCTGCTCCCTCCTTCTCTCCTTGGCAGGGCTCCTTCCAGG TTCTGCTCCCTCCTTCTCTCCTCGGCAGGGCTCCTTCCAGG < 41bp 0.436850338083755 0.72554951610988 0.12231141 0.24072218 prediction 0.451099032219759 Functional Gain - CCSER2 ENSG00000107771 CDS Human protein_coding chr10:86259659 chr10:86259661 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_117172 0 0 2 U2AF2 POSTAR2 ENCODE chr10:86259592-86259698
64251 chr7 73932595 73932595 1 + C T SKCM 73932594 + 73932574 73932614 41 GAAGGCCAGCCGAGTATGACCCCAAGGCCCTCATGGCCATC GAAGGCCAGCCGAGTATGACCTCAAGGCCCTCATGGCCATC < 41bp 0.597633537055678 0.823174134728336 0.48833847 0.25281483 prediction 0.451081195345317 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73932594 chr7:73932595 nonsynonymous SNV 0.956 0 22 hm5C_associated_SNPs_117176 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:73932536-73932597
64251 chr5 172550130 172550130 1 + C T STAD 172550129 + 172550109 172550149 41 ATCAAGCAAGAGATTGTAAACCGGGTACAGAATCCAAGAGA ATCAAGCAAGAGATTGTAAACTGGGTACAGAATCCAAGAGA < 41bp 0.546191464960823 0.771724790505223 0.91689765 0.6607007 prediction 0.451066651088801 Functional Gain - CREBRF ENSG00000164463 CDS Human protein_coding chr5:172550129 chr5:172550130 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_117179 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:172550129-172550143
64251 chr8 104343684 104343684 1 + C T SKCM 104343683 + 104343663 104343703 41 TCCACATCTCTGCTTGTTCACCCGGTTTCAGGAGTGAGAAA TCCACATCTCTGCTTGTTCACTCGGTTTCAGGAGTGAGAAA < 41bp 0.547817162257704 0.773323918952037 0.035426915 0.018168628 prediction 0.451013513388665 Functional Gain - FZD6 ENSG00000164930 CDS Human protein_coding chr8:104343683 chr8:104343684 nonsynonymous SNV 0.267 0 22 hm5C_associated_SNPs_117186 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:104343647-104343698
64251 chr10 102743173 102743173 1 + T C SKCM 102743171 + 102743151 102743191 41 TTGTGGCTACTCAATGGGAGCATGGGCCTGAGCGATGGGCA TTGTGGCTACTCAATGGGAGCACGGGCCTGAGCGATGGGCA < 41bp 0.480188768521339 0.725505302195026 0.8033446 0.6724379 prediction 0.451010604390052 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743171 chr10:102743173 nonsynonymous SNV 0.964 0 23 hm5C_associated_SNPs_117187 0 0 3 GRWD1 POSTAR2 ENCODE chr10:102743163-102743200
64251 chr5 134011751 134011751 1 + A G LIHC 134011748 + 134011728 134011768 41 GCTGACTAGCATTCCTCAGACGCAGGCCTTATTGAATAAAG GCTGACTAGCATTCCTCAGACGCGGGCCTTATTGAATAAAG < 41bp 0.498410576378626 0.72550268789193 0.12644157 0.24087274 prediction 0.45100537578386 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134011748 chr5:134011751 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_117188 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:134011731-134011756
64251 chr1 156761543 156761543 1 + C A rs35929266 156761539 + 156761519 156761559 41 CAGGACCCGGCCCTGGTCCCCCCCCAGGAAATTGCCCCAGA CAGGACCCGGCCCTGGTCCCCCCCAAGGAAATTGCCCCAGA < 41bp 0.293796979504476 0.72550250935451 0.038864106 0.0351035 prediction 0.45100501870902 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156761539 chr1:156761543 nonsynonymous SNV 0.986 1 25 hm5C_associated_SNPs_117189 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:156761519-156761543
64251 chr12 49666155 49666155 1 + C T SKCM 49666154 + 49666134 49666174 41 AGTTGATTATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTT AGTTGATTATGGCAAGAAGTCTAAGCTGGAGTTCTCCATTT < 41bp 0.527439622368406 0.752935442133278 0.2092781 0.11265439 prediction 0.450991639529744 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666154 chr12:49666155 synonymous SNV . 0 22 hm5C_associated_SNPs_117194 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:49666138-49666201
64251 chr11 124749423 124749423 1 + C T SKCM 124749422 + 124749402 124749442 41 CAAGGACCCCGTGCTCGATTCCGGAAGAAACCCAAGGCTCT CAAGGACCCCGTGCTCGATTCTGGAAGAAACCCAAGGCTCT < 41bp 0.5854821044534 0.810977773585775 0.8988035 0.42274138 prediction 0.450991338264749 Functional Gain - ROBO3 ENSG00000154134 CDS Human protein_coding chr11:124749422 chr11:124749423 nonsynonymous SNV 0.755 1 22 hm5C_associated_SNPs_117195 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:124749403-124749428
64251 chr22 29694744 29694744 1 + C T COAD 29694743 + 29694723 29694763 41 GTCCAGGAGGCCCAGGAGGTCCTGGGGGACCCATGGGTCGC GTCCAGGAGGCCCAGGAGGTCTTGGGGGACCCATGGGTCGC < 41bp 0.563238392435351 0.78872348123037 0.8106771 0.6756587 prediction 0.450970177590037 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29694743 chr22:29694744 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_117198 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:29694741-29694771
64251 chr6 10723354 10723354 1 + T G rs9467362 10723351 + 10723331 10723371 41 CTGCGCAGGCACAACAGAGCCGCTCCCCTCTCCTCGCCCCG CTGCGCAGGCACAACAGAGCCGCGCCCCTCTCCTCGCCCCG < 41bp 0.394595175043453 0.72548157839681 0.16670302 0.1317744 prediction 0.45096315679362 Functional Gain - TMEM14C ENSG00000111843 UTR5 Human protein_coding chr6:10723351 chr6:10723354 . . 0 24 hm5C_associated_SNPs_117201 0 0 1 EIF3D POSTAR2 ENCODE chr6:10723354-10723376
64251 chr7 75616006 75616006 1 + C G rs41302348 75616002 + 75615982 75616022 41 CCTGGCAGCACAGCCCAGGGCCTGCATGGGGGCACCGGGCT CCTGGCAGCACAGCCCAGGGCCTGGATGGGGGCACCGGGCT < 41bp 0.446883158302302 0.725479639297918 0.3012423 0.31725672 prediction 0.450959278595837 Functional Gain - POR ENSG00000127948 UTR3 Human protein_coding chr7:75616002 chr7:75616006 . . 0 25 hm5C_associated_SNPs_117202 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr7:75616001-75616027
64251 chr22 31655931 31655931 1 + A G LIHC 31655928 + 31655908 31655948 41 CATGTTTGAGAGACTCTCCACAGAGTCTGTTCAGGAGCAGC CATGTTTGAGAGACTCTCCACAGGGTCTGTTCAGGAGCAGC < 41bp 0.479724064488811 0.72546737283987 0.15393588 0.3160388 prediction 0.45093474567974 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31655928 chr22:31655931 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_117204 0 0 1 SF3A3 POSTAR2 ENCODE chr22:31655890-31655931
64251 chr12 56630767 56630767 1 + C A UCEC 56630763 + 56630743 56630783 41 CGGCCTCAGTACCACCTTAGCGGTCTTCTGCCATGAGCTGC CGGCCTCAGTACCACCTTAGCGGTATTCTGCCATGAGCTGC < 41bp 0.310214629894285 0.725458544127278 0.6071798 0.77724487 prediction 0.450917088254556 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56630763 chr12:56630767 synonymous SNV . 0 25 hm5C_associated_SNPs_117210 0 0 1 GRWD1 POSTAR2 ENCODE chr12:56630746-56630789
64251 chr5 10250443 10250443 1 + T A rs2578618 10250439 + 10250419 10250459 41 CCGGTTGGGGGGAAGTAATTCCGGTTGTTGCACCATGGCGT CCGGTTGGGGGGAAGTAATTCCGGATGTTGCACCATGGCGT < 41bp 0.627716483309479 0.853173636725042 0.92758703 0.9377934 prediction 0.450914306831127 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10250439 chr5:10250443 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_117214 0 0 48 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:10250360-10250520
64251 chr16 66600601 66600601 1 + A G BLCA 66600598 + 66600578 66600618 41 CGCAGTCTCAATTCGCAGTGCGCAGTCCGCAGCCGCCGCAC CGCAGTCTCAATTCGCAGTGCGCGGTCCGCAGCCGCCGCAC < 41bp 0.56410929878849 0.789566003567605 0.3679558 0.8930833 prediction 0.450913409558231 Functional Gain - CMTM1 ENSG00000089505 CDS Human protein_coding chr16:66600598 chr16:66600601 nonsynonymous SNV 0.006 0 24 hm5C_associated_SNPs_117215 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:66600588-66600616
64251 chr5 78532658 78532658 1 + C G rs3733893 78532654 + 78532634 78532674 41 AGAGGAGCGGCTCCCGGGAGCAAGCGGGGGCGCGAGGGGGC AGAGGAGCGGCTCCCGGGAGCAAGGGGGGGCGCGAGGGGGC < 41bp 0.60902356682271 0.834480101935561 0.84820247 0.9145888 prediction 0.450913070225702 Functional Gain - JMY ENSG00000152409 CDS Human protein_coding chr5:78532654 chr5:78532658 nonsynonymous SNV 0.988 0 25 hm5C_associated_SNPs_117216 0 0 1 FXR2 POSTAR2 ENCODE chr5:78532647-78532674
64251 chr1 151536461 151536461 1 + C T SKCM 151536460 + 151536440 151536480 41 AAGAGTGAGGTCCAGTACATCCAGGAGGTGGGCACCCCTTA AAGAGTGAGGTCCAGTACATCTAGGAGGTGGGCACCCCTTA < 41bp 0.570418091186294 0.795865646623325 0.3801732 0.30437404 prediction 0.450895110874062 Functional Gain - TUFT1 ENSG00000143367 CDS Human protein_coding chr1:151536460 chr1:151536461 stopgain 0.999 1 22 hm5C_associated_SNPs_117217 0 0 2 ZNF622 POSTAR2 ENCODE chr1:151536379-151536485
64251 chr3 9731824 9731824 1 + C T SKCM 9731823 + 9731803 9731843 41 GTCCCCTGGAGGTCCCCAAACCCAGGTGAGGAGCTCCAAAG GTCCCCTGGAGGTCCCCAAACTCAGGTGAGGAGCTCCAAAG < 41bp 0.462003915933658 0.725439604758934 0.65919626 0.42397943 prediction 0.450879209517867 Functional Gain - MTMR14 ENSG00000163719 CDS Human protein_coding chr3:9731823 chr3:9731824 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_117221 0 0 1 DDX24 POSTAR2 ENCODE chr3:9731824-9731829
64251 chr1 211486899 211486899 1 + C T COAD 211486898 + 211486878 211486918 41 GTCCAACACTGCCTGCTGCCCCGGCTCTTCACCGGCAGCCT GTCCAACACTGCCTGCTGCCCTGGCTCTTCACCGGCAGCCT < 41bp 0.531461275947264 0.756898738354104 0.19878119 0.06706938 prediction 0.450874924813679 Functional Gain - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486898 chr1:211486899 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_117224 0 0 1 RBM15 POSTAR2 ENCODE chr1:211486846-211486901
64251 chr1 1269329 1269329 1 + T C CESC 1269327 + 1269307 1269347 41 CTGCCTGCGGGGGCCCTGGGCCTGGCTGGTGGTGCTGCTGG CTGCCTGCGGGGGCCCTGGGCCCGGCTGGTGGTGCTGCTGG < 41bp 0.533952923899038 0.759387969599228 0.5892821 0.46121928 prediction 0.450870091400379 Functional Gain - TAS1R3 ENSG00000169962 CDS Human protein_coding chr1:1269327 chr1:1269329 nonsynonymous SNV 0.574 5 23 hm5C_associated_SNPs_117225 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:1269301-1269334
64251 chr8 26505224 26505224 1 + C T BLCA 26505223 + 26505203 26505243 41 AAAGTCTTCAACCTTTACCCCCGGAAAGGCCGCATTGCTGT AAAGTCTTCAACCTTTACCCCTGGAAAGGCCGCATTGCTGT < 41bp 0.460170137114677 0.725434208346096 0.19092217 0.35178384 prediction 0.450868416692191 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26505223 chr8:26505224 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_117226 0 0 2 EWSR1 POSTAR2 SRX029344 chr8:26505206-26505229
64251 chr13 46039188 46039188 1 + T G UCEC 46039185 + 46039165 46039205 41 GGCGGCGATGGCGGAGGCGGCGCTGTTGCTGCTGCCTGAGG GGCGGCGATGGCGGAGGCGGCGCGGTTGCTGCTGCCTGAGG < 41bp 0.696131422748262 0.921561337273682 0.8552724 0.89375603 prediction 0.450859829050839 Functional Gain - COG3 ENSG00000136152 CDS Human protein_coding chr13:46039185 chr13:46039188 nonsynonymous SNV 0.916 1 24 hm5C_associated_SNPs_117229 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr13:46039163-46039202
64251 chr22 41489047 41489047 1 + C G LUAD 41489043 + 41489023 41489063 41 GGTGGAACCGGGGCCGCCTTCAGCCAAGCGGCCTAAACTCT GGTGGAACCGGGGCCGCCTTCAGCGAAGCGGCCTAAACTCT < 41bp 0.43791312371718 0.725429355913438 0.81519747 0.88579273 prediction 0.450858711826876 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41489043 chr22:41489047 synonymous SNV . 0 25 hm5C_associated_SNPs_117231 0 0 9 FXR2 POSTAR2 GSE39682,GSM977620 chr22:41489040-41489060
64251 chr11 74904478 74904478 1 + C T SKCM 74904477 + 74904457 74904497 41 GGCATCGTGGTGGGTGGCGTCCTGGTCAAGCGGCTCCACCT GGCATCGTGGTGGGTGGCGTCTTGGTCAAGCGGCTCCACCT < 41bp 0.524364517466495 0.749792033509125 0.7377592 0.6485619 prediction 0.45085503208526 Functional Gain - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74904477 chr11:74904478 synonymous SNV . 0 22 hm5C_associated_SNPs_117233 0 0 1 PPIG POSTAR2 ENCODE chr11:74904442-74904522
64251 chr7 97836465 97836465 1 + T C rs58880085 97836463 + 97836443 97836483 41 CAGCCGTTCCTTCGGGGGTCCTTGGGCCTGCAGTCCCCTCA CAGCCGTTCCTTCGGGGGTCCTCGGGCCTGCAGTCCCCTCA < 41bp 0.508308251236926 0.733728594321871 0.73247683 0.9189091 prediction 0.450840686169889 Functional Gain - LMTK2 ENSG00000164715 UTR3 Human protein_coding chr7:97836463 chr7:97836465 . . 0 23 hm5C_associated_SNPs_117236 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:97836442-97836522
64251 chr13 103518153 103518153 1 + C T UCEC 103518152 + 103518132 103518172 41 GGGAGAAGCCCCTGCTGAGTCCGAGAGCCTCCTGAGGGACA GGGAGAAGCCCCTGCTGAGTCTGAGAGCCTCCTGAGGGACA < 41bp 0.541522975042702 0.766942799649022 0.39064625 0.24375787 prediction 0.450839649212641 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103518152 chr13:103518153 synonymous SNV . 0 22 hm5C_associated_SNPs_117237 0 0 2 GRWD1 POSTAR2 ENCODE chr13:103518062-103518236
64251 chr6 71566697 71566697 1 + T C CESC 71566694 + 71566674 71566714 41 CCAAAGACTCCATCTTATCTCTGTATGGCACAGGAACCATT CCAAAGACTCCATCTTATCTCTGCATGGCACAGGAACCATT < 41bp 0.528061041822952 0.753476468769412 0.054360896 0.16505438 prediction 0.45083085389292 Functional Gain - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71566694 chr6:71566697 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_117239 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:71566679-71566719
64251 chr20 55020983 55020983 1 + C T COAD 55020982 + 55020962 55021002 41 CTCACGCTTCCCAGACCTGTCCGGGCCTCACTGCCGACTCT CTCACGCTTCCCAGACCTGTCTGGGCCTCACTGCCGACTCT < 41bp 0.529291002168954 0.754694947713809 0.95492065 0.9494639 prediction 0.450807891089709 Functional Gain - CASS4 ENSG00000087589 CDS Human protein_coding chr20:55020982 chr20:55020983 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_117242 0 0 3 BUD13 POSTAR2 ENCODE chr20:55020914-55021070
64251 chr12 133780668 133780668 1 + T C rs537166127 133780666 + 133780646 133780686 41 AAGTCATACCTAATTATACACATGAGAACTCATTCAGGTGA AAGTCATACCTAATTATACACACGAGAACTCATTCAGGTGA < 41bp 0.483187830904027 0.725399512506444 0.22768334 0.1601054 prediction 0.450799025012888 Functional Gain - ZNF268 ENSG00000090612 CDS Human protein_coding chr12:133780666 chr12:133780668 nonsynonymous SNV 0.013 1 23 hm5C_associated_SNPs_117243 0 0 9 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:133780644-133780669
64251 chr6 26407991 26407991 1 + C T SKCM 26407990 + 26407970 26408010 41 ACTGGCTGGTACCCCCAACCCCAAATACAGTGGAGCAACAA ACTGGCTGGTACCCCCAACCCTAAATACAGTGGAGCAACAA < 41bp 0.590360436873066 0.815758890627234 0.33271545 0.36508244 prediction 0.450796907508337 Functional Gain - BTN3A1 ENSG00000026950 CDS Human protein_coding chr6:26407990 chr6:26407991 stopgain 0.006 0 22 hm5C_associated_SNPs_117244 0 0 1 TBRG4 POSTAR2 ENCODE chr6:26407970-26408008
64251 chr12 58090147 58090147 1 + C T UCEC 58090146 + 58090126 58090166 41 TAATGGGAGGCCCCGGGAGGCCGAGGTTCGGGTGAGTCTTG TAATGGGAGGCCCCGGGAGGCTGAGGTTCGGGTGAGTCTTG < 41bp 0.508785522145179 0.734176797720389 0.7880255 0.8598857 prediction 0.45078255115042 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58090146 chr12:58090147 synonymous SNV . 0 22 hm5C_associated_SNPs_117246 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:58090127-58090168
64251 chr8 43048914 43048914 1 + C A STAD 43048913 + 43048893 43048933 41 TGTTAAGGTACTTTACCACACCGAGGTGGCCTATGACCCCG TGTTAAGGTACTTTACCACACAGAGGTGGCCTATGACCCCG < 41bp 0.594969514223818 0.820358248378733 0.069429696 0.19248256 prediction 0.450777468309829 Functional Gain - HGSNAT ENSG00000165102 CDS Human protein_coding chr8:43048913 chr8:43048914 synonymous SNV . 0 22 hm5C_associated_SNPs_117247 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr8:43048913-43048914
64251 chr1 47903728 47903728 1 + C A rs76772223 47903724 + 47903704 47903744 41 CCCCGCCCGCGCGCAAAACGCACTCGCCCCAGAGGCAGCGC CCCCGCCCGCGCGCAAAACGCACTAGCCCCAGAGGCAGCGC < 41bp 0.474973519372574 0.725387412621959 0.20981145 0.3513422 prediction 0.450774825243918 Functional Gain - FOXD2 ENSG00000186564 UTR5 Human protein_coding chr1:47903724 chr1:47903728 . . 0 25 hm5C_associated_SNPs_117249 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:47903728-47903729
64251 chr5 147593525 147593525 1 + A G COAD 147593522 + 147593502 147593542 41 GGTCTACTGCACTCGGGAATCTAACCCACACTGTGGCTCTG GGTCTACTGCACTCGGGAATCTAGCCCACACTGTGGCTCTG < 41bp 0.524614556505591 0.749990975755438 0.104787916 0.3459506 prediction 0.450752838499693 Functional Gain - SPINK6 ENSG00000178172 CDS Human protein_coding chr5:147593522 chr5:147593525 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_117252 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr5:147593517-147593538
64251 chr11 43469611 43469611 1 + C T CESC 43469610 + 43469590 43469630 41 CCGGACGAATGCCTCAAACTCCGCTGGGTAGAGCTGACTGC CCGGACGAATGCCTCAAACTCTGCTGGGTAGAGCTGACTGC < 41bp 0.462134416838406 0.72537573808056 0.31415588 0.22733968 prediction 0.45075147616112 Functional Gain - TTC17 ENSG00000052841 CDS Human protein_coding chr11:43469610 chr11:43469611 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_117253 0 0 4 SF3B4 POSTAR2 ENCODE chr11:43469499-43469611
64251 chr2 202344789 202344789 1 + T G UCEC 202344786 + 202344766 202344806 41 AAGCCAGGATTCAATACTTTCACTGTTGCCTCCTGCTTATA AAGCCAGGATTCAATACTTTCACGGTTGCCTCCTGCTTATA < 41bp 0.348389647367869 0.725370422513071 0.14292824 0.44814017 prediction 0.450740845026142 Functional Gain - STRADB ENSG00000082146 CDS Human protein_coding chr2:202344786 chr2:202344789 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_117255 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:202344768-202344826
64251 chr4 124323682 124323682 1 + C T SKCM 124323681 + 124323661 124323701 41 TAAGCTGGAGAGCTGCCCCTCCCGGGGTCAGGGTAAACCAT TAAGCTGGAGAGCTGCCCCTCTCGGGGTCAGGGTAAACCAT < 41bp 0.581510108408386 0.806879746037795 0.2607855 0.103272736 prediction 0.450739275258818 Functional Gain - SPRY1 ENSG00000164056 CDS Human protein_coding chr4:124323681 chr4:124323682 synonymous SNV . 0 22 hm5C_associated_SNPs_117256 0 0 1 DDX6 POSTAR2 ENCODE chr4:124323667-124323685
64251 chr16 31053663 31053663 1 + C A rs11866417 31053662 + 31053642 31053682 41 GGGCCAGGCCTCGCCGACCCCCGACTGCGCCTCCCGGTGGC GGGCCAGGCCTCGCCGACCCCAGACTGCGCCTCCCGGTGGC < 41bp 0.514536735724525 0.739905753468989 0.26700675 0.52178687 prediction 0.450738035488929 Functional Gain - STX4;ZNF668 ENSG00000260911 upstream Human lincRNA chr16:31053662 chr16:31053663 . . 0 22 hm5C_associated_SNPs_117257 0 0 1 SLTM POSTAR2 ENCODE chr16:31053605-31053684
64251 chr6 116892671 116892671 1 + C A rs545409841 116892667 + 116892647 116892687 41 CCGCCTGGCCGCCGCCCGCTCTCCCGGCGCGGCAGCTGTCT CCGCCTGGCCGCCGCCCGCTCTCCAGGCGCGGCAGCTGTCT < 41bp 0.684727143564214 0.910083097251876 0.26812786 0.9629581 prediction 0.450711907375324 Functional Gain - RWDD1 ENSG00000111832 UTR5 Human protein_coding chr6:116892667 chr6:116892671 . . 0 25 hm5C_associated_SNPs_117263 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:116892654-116892681
64251 chr17 57287957 57287957 1 + A G UCEC 57287954 + 57287934 57287974 41 TGGAGGTGGACTCTCTTTACCTCATGCAGAAGCACACGAGT TGGAGGTGGACTCTCTTTACCTCGTGCAGAAGCACACGAGT < 41bp 0.480840314525065 0.725354954033645 0.16012263 0.12775755 prediction 0.450709908067291 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287954 chr17:57287957 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_117264 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:57287940-57287960
64251 chr20 9496928 9496928 1 + C T LUSC 9496927 + 9496907 9496947 41 GCCACAACATGTCCAAGGGACCTGAGGCGACTTGGAGGCTG GCCACAACATGTCCAAGGGACTTGAGGCGACTTGGAGGCTG < 41bp 0.573923711669464 0.799264187052769 0.3238746 0.40548927 prediction 0.45068095076661 Functional Gain - LAMP5 ENSG00000125869 CDS Human protein_coding chr20:9496927 chr20:9496928 nonsynonymous SNV 0.986 0 22 hm5C_associated_SNPs_117268 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:9496928-9496962
64251 chr1 156169930 156169930 1 + C T UCEC 156169929 + 156169909 156169949 41 GTCACCACTTATGAGCTCACCCGGAAGTTTGTAGCTGACTA GTCACCACTTATGAGCTCACCTGGAAGTTTGTAGCTGACTA < 41bp 0.570979214018073 0.796311577143042 0.4782961 0.4190666 prediction 0.450664726249936 Functional Gain - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156169929 chr1:156169930 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_117271 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:156169906-156169943
64251 chr3 14509682 14509682 1 + A G LUSC 14509679 + 14509659 14509699 41 TTCCATCCTGGGCTTCATGGCACAAGAGCAAGGGGTGGACA TTCCATCCTGGGCTTCATGGCACGAGAGCAAGGGGTGGACA < 41bp 0.534017417334241 0.759344257722122 0.3706693 0.5833707 prediction 0.450653680775763 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14509679 chr3:14509682 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_117276 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:14509651-14509684
64251 chr7 29924037 29924037 1 + C T SKCM 29924036 + 29924016 29924056 41 CTCCCCGAGGGCTTCTTTGCCCGCGCCCCCTTTGCCAGGAG CTCCCCGAGGGCTTCTTTGCCTGCGCCCCCTTTGCCAGGAG < 41bp 0.549087929052724 0.774413859582911 0.20988458 0.09369418 prediction 0.450651861060374 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29924036 chr7:29924037 synonymous SNV . 0 22 hm5C_associated_SNPs_117277 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:29924015-29924056
64251 chr2 233652033 233652033 1 + A G LIHC 233652030 + 233652010 233652050 41 ATGGAGAGAGGTGGCGACCTCACAGTCCTGGTAAGAATTCT ATGGAGAGAGGTGGCGACCTCACGGTCCTGGTAAGAATTCT < 41bp 0.504518091777502 0.729838701263975 0.30145717 0.50438666 prediction 0.450641218972946 Functional Gain - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233652030 chr2:233652033 nonsynonymous SNV 0.968 2 24 hm5C_associated_SNPs_117279 0 0 7 DDX24 POSTAR2 ENCODE chr2:233651906-233652042
64251 chr5 178987121 178987121 1 + C T GBM 178987120 + 178987100 178987140 41 CAGTCGGCTCTGAGCCTGGGCCGCAGCCTGGATGCGGACCA CAGTCGGCTCTGAGCCTGGGCTGCAGCCTGGATGCGGACCA < 41bp 0.553782325714886 0.779098131112105 0.28321058 0.17247501 prediction 0.450631610794437 Functional Gain - RUFY1 ENSG00000176783 CDS Human protein_coding chr5:178987120 chr5:178987121 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117282 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:178987121-178987122
64251 chr12 124092052 124092052 1 + A G KICH 124092049 + 124092029 124092069 41 CGAGGTCCTGTCGCATTTCACGAAGCACTTCCCCGAGTTCA CGAGGTCCTGTCGCATTTCACGAGGCACTTCCCCGAGTTCA < 41bp 0.489345203316724 0.725313483684578 0.8903231 0.93094885 prediction 0.450626967369156 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124092049 chr12:124092052 nonsynonymous SNV 0.905 0 24 hm5C_associated_SNPs_117283 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:124092024-124092056
64251 chr3 10970933 10970933 1 + C T SKCM 10970932 + 10970912 10970952 41 ACCGCCGTGGTGGACATGTACCCCAAGGTTTTCCGGAGGGG ACCGCCGTGGTGGACATGTACTCCAAGGTTTTCCGGAGGGG < 41bp 0.471028316177132 0.725303407396701 0.047447562 0.93499255 prediction 0.450606814793402 Functional Gain - SLC6A11 ENSG00000132164 CDS Human protein_coding chr3:10970932 chr3:10970933 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117287 0 0 3 PPIG POSTAR2 ENCODE chr3:10970901-10970959
64251 chr6 108687531 108687531 1 + C A SKCM 108687530 + 108687510 108687550 41 TGGCAACATCCAACAGGCCACCGGAAGGTAAAAACAAACAT TGGCAACATCCAACAGGCCACAGGAAGGTAAAAACAAACAT < 41bp 0.463865909430313 0.725299217366716 0.053754807 0.02946055 prediction 0.450598434733433 Functional Gain - AFG1L ENSG00000135537 CDS Human protein_coding chr6:108687530 chr6:108687531 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117293 0 0 1 PPIG POSTAR2 ENCODE chr6:108687436-108687540
64251 chr2 233925277 233925277 1 + T C LUSC 233925275 + 233925255 233925295 41 GGCAAGGACGGGAGCTTCCTCGTGCGTGCCAGCGAGTCCAT GGCAAGGACGGGAGCTTCCTCGCGCGTGCCAGCGAGTCCAT < 41bp 0.551867386174502 0.777154793675724 0.75508755 0.88342154 prediction 0.450574815002444 Functional Gain - INPP5D ENSG00000168918 CDS Human protein_coding chr2:233925275 chr2:233925277 nonsynonymous SNV 0.989 5 23 hm5C_associated_SNPs_117298 0 0 1 GRWD1 POSTAR2 ENCODE chr2:233925238-233925282
64251 chr15 64448894 64448894 1 + C A rs138537382 64448893 + 64448873 64448913 41 TGAATCCCCGGTGAGGATTGCCCAGTAGTAGCCCTTGCTTC TGAATCCCCGGTGAGGATTGCACAGTAGTAGCCCTTGCTTC < 41bp 0.47542229879141 0.725276571977839 0.19023025 0.319252 prediction 0.450553143955679 Functional Gain - SNX22 ENSG00000157734 UTR3 Human protein_coding chr15:64448893 chr15:64448894 . . 0 22 hm5C_associated_SNPs_117300 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:64448874-64448897
64251 chr7 151065965 151065965 1 + C T UCEC 151065964 + 151065944 151065984 41 GCGGCCACTCATATTACCAACCGCAGAGAGGTACCCACTTT GCGGCCACTCATATTACCAACTGCAGAGAGGTACCCACTTT < 41bp 0.534731866942786 0.759994696121853 0.25548714 0.8186113 prediction 0.450525658358134 Functional Gain - NUB1 ENSG00000013374 CDS Human protein_coding chr7:151065964 chr7:151065965 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117303 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:151065938-151065966
64251 chr3 110831176 110831176 1 + C T SKCM 110831175 + 110831155 110831195 41 ATCTGCAAAGCTGTTACATTCCCGCTTGGAAATGCCCAGTC ATCTGCAAAGCTGTTACATTCTCGCTTGGAAATGCCCAGTC < 41bp 0.580955955037452 0.806212127845905 0.050328404 0.25344032 prediction 0.450512345616906 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110831175 chr3:110831176 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_117306 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:110831161-110831201
64251 chr12 56625219 56625219 1 + C A BRCA 56625215 + 56625195 56625235 41 TGTACGGCGAGAATGGGACGCTGACTGCAGGGGGCTTGGCG TGTACGGCGAGAATGGGACGCTGAATGCAGGGGGCTTGGCG < 41bp 0.305541855948026 0.725228698352581 0.20031941 0.47677115 prediction 0.450457396705162 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625215 chr12:56625219 nonsynonymous SNV 0.995 2 25 hm5C_associated_SNPs_117317 0 0 1 RBM15 POSTAR2 ENCODE chr12:56625209-56625250
64251 chr1 33238727 33238727 1 + T C rs190247919 33238725 + 33238705 33238745 41 CTGGCAGTTGCCGCTTCAGTCTTGGCCTTAGCCTCATCTTG CTGGCAGTTGCCGCTTCAGTCTCGGCCTTAGCCTCATCTTG < 41bp 0.487445110596698 0.725215532774458 0.25192976 0.20988825 prediction 0.450431065548916 Functional Gain - KIAA1522 ENSG00000162522 UTR3 Human protein_coding chr1:33238725 chr1:33238727 . . 0 23 hm5C_associated_SNPs_117320 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:33238705-33238728
64251 chr6 16145463 16145463 1 + T C LUSC 16145461 + 16145441 16145481 41 CTGAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGGAGGA CTGAAGGAAGCCATGCTGTGCACGGTGTGCTGCGAGGAGGA < 41bp 0.455672694285731 0.725209306351103 0.13521633 0.09869918 prediction 0.450418612702207 Functional Gain - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16145461 chr6:16145463 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_117321 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:16145446-16145484
64251 chr10 51585413 51585413 1 + A G LIHC 51585410 + 51585390 51585430 41 TGGCTTATCAGGCCCCCATACAAAGAAGGAAGTCCCAAGGA TGGCTTATCAGGCCCCCATACAAGGAAGGAAGTCCCAAGGA < 41bp 0.547736749051274 0.772939347338589 0.20814654 0.67912525 prediction 0.450405196574631 Functional Gain - NCOA4 ENSG00000138293 CDS Human other chr10:51585410 chr10:51585413 synonymous SNV . 0 24 hm5C_associated_SNPs_117325 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:51585384-51585415
64251 chr19 57999333 57999333 1 + C G rs113628862 57999329 + 57999309 57999349 41 ACAGGCTCCGATGGCGGCGGCCGCCCTGAGGGACCCCGCTC ACAGGCTCCGATGGCGGCGGCCGCGCTGAGGGACCCCGCTC < 41bp 0.431187151630527 0.725195829980244 0.0504795 0.16301915 prediction 0.450391659960488 Functional Gain - ZNF419 ENSG00000105136;ENSG00000268107 CDS Human other chr19:57999329 chr19:57999333 synonymous SNV . 0 25 hm5C_associated_SNPs_117329 0 0 2 PRPF8 POSTAR2 ENCODE chr19:57999301-57999391
64251 chr16 90110158 90110158 1 + C A COAD 90110157 + 90110137 90110177 41 TGGCACTAACTTCATTGACACCTGAGTCACAGCTGCCCAGT TGGCACTAACTTCATTGACACATGAGTCACAGCTGCCCAGT < 41bp 0.463130172275371 0.725193634783086 0.26441824 0.43109068 prediction 0.450387269566172 Functional Gain - URAHP ENSG00000222019 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:90110157 chr16:90110158 . . 0 22 hm5C_associated_SNPs_117331 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:90110133-90110167
64251 chr6 36178238 36178238 1 + C T COAD 36178237 + 36178217 36178257 41 AGAGAACATCGGCTATGACCCCGAGAGGGGCACTCACCTGC AGAGAACATCGGCTATGACCCTGAGAGGGGCACTCACCTGC < 41bp 0.568864650433001 0.794056856921975 0.6459422 0.38115475 prediction 0.450384412977948 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36178237 chr6:36178238 synonymous SNV . 0 22 hm5C_associated_SNPs_117333 0 0 2 FXR2 POSTAR2 ENCODE chr6:36178211-36178269
64251 chr12 121154737 121154737 1 + C T SKCM 121154736 + 121154716 121154756 41 ATGATCGAACGGCACTATTTCCGGGAACACTTGCTGAAAAA ATGATCGAACGGCACTATTTCTGGGAACACTTGCTGAAAAA < 41bp 0.479129538993978 0.725186662363217 0.898162 0.85840034 prediction 0.450373324726434 Functional Gain - UNC119B ENSG00000175970 CDS Human protein_coding chr12:121154736 chr12:121154737 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117336 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:121154705-121154742
64251 chr11 71820822 71820822 1 - G A rs186960319 71820823 - 71820803 71820843 41 ACCAGCTGATGGCCCCAGTGCCTGAAAGTGCCCTTGGGCAC ACCAGCTGATGGCCCCAGTGCTTGAAAGTGCCCTTGGGCAC < 41bp 0.517977816807985 0.743161825603244 0.09927878 0.1059849 prediction 0.450368017590518 Functional Gain - ANAPC15;LRTOMT ENSG00000110200;ENSG00000184154 UTR3 Human other chr11:71820823 chr11:71820822 . . 0 22 hm5C_associated_SNPs_117337 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:71820740-71820844
64251 chr9 137019627 137019627 1 + C T COAD 137019626 + 137019606 137019646 41 TGTCTTTTGTGAAGTTCTCCCCGAACGGCAAATACATCCTG TGTCTTTTGTGAAGTTCTCCCTGAACGGCAAATACATCCTG < 41bp 0.461344712381323 0.725169127048857 0.055261344 0.04636708 prediction 0.450338254097714 Functional Gain - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137019626 chr9:137019627 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_117339 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:137019620-137019646
64251 chr1 149858707 149858707 1 + C G CESC 149858703 + 149858683 149858723 41 GGCGGTCCTCGAGTACCTGACCGCCGAGATCCTGGAGCTGG GGCGGTCCTCGAGTACCTGACCGCGGAGATCCTGGAGCTGG < 41bp 0.45066538034695 0.725166157425251 0.33829686 0.75808156 prediction 0.450332314850503 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858703 chr1:149858707 synonymous SNV . 0 25 hm5C_associated_SNPs_117340 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:149858679-149858710
64251 chr19 17303723 17303723 1 + C T COAD 17303722 + 17303702 17303742 41 CAGGCCTGCTGGCGGTCCTACCGGGTCCGGAGGGCGCTGGA CAGGCCTGCTGGCGGTCCTACTGGGTCCGGAGGGCGCTGGA < 41bp 0.527492036347779 0.752649881316594 0.822538 0.42810297 prediction 0.450315689937631 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17303722 chr19:17303723 nonsynonymous SNV 0.715 1 22 hm5C_associated_SNPs_117342 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17303693-17303724
64251 chr10 70666540 70666540 1 + A G ACC 70666537 + 70666517 70666557 41 AACAAGAGAAAATGGTGTTACAGATGACCTGGATGCTCCCA AACAAGAGAAAATGGTGTTACAGGTGACCTGGATGCTCCCA < 41bp 0.500805720261102 0.725960116908391 0.3391409 0.51321685 prediction 0.450308793294576 Functional Gain - DDX50 ENSG00000107625 CDS Human protein_coding chr10:70666537 chr10:70666540 nonsynonymous SNV 0.912 1 24 hm5C_associated_SNPs_117343 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221665 chr10:70666520-70666540
64251 chr8 9564484 9564484 1 + C T OV 9564483 + 9564463 9564503 41 CTGTGGATATGGCTCCAACTCCGGAGCTTAGGGAGAGATTG CTGTGGATATGGCTCCAACTCTGGAGCTTAGGGAGAGATTG < 41bp 0.561227870647932 0.786376691906857 0.9027076 0.3149585 prediction 0.45029764251785 Functional Gain - TNKS ENSG00000173273 CDS Human protein_coding chr8:9564483 chr8:9564484 nonsynonymous SNV 0.888 2 22 hm5C_associated_SNPs_117344 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr8:9564465-9564488
64251 chr9 21854738 21854738 1 + C T ACC 21854737 + 21854717 21854757 41 CGGGCAGAAAGCTTCATGTTCCGCACCTGGGGGGCGGATGT CGGGCAGAAAGCTTCATGTTCTGCACCTGGGGGGCGGATGT < 41bp 0.462243805673722 0.725145731006057 0.003558278 0.0054638684 prediction 0.450291462012113 Functional Gain - MTAP ENSG00000099810 CDS Human protein_coding chr9:21854737 chr9:21854738 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_117346 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:21854709-21854747
64251 chr8 117887056 117887056 1 - T C SARC 117887059 - 117887039 117887079 41 AAACATCCTGCCGATTTGAACCGAGGATTTGGGCGGCAGGA AAACATCCTGCCGATTTGAACCGGGGATTTGGGCGGCAGGA < 41bp 0.532490375521985 0.757635820095692 0.20347744 0.90147084 prediction 0.450290889147414 Functional Gain - RAD21-AS1 ENSG00000253327 ncRNA_exonic Human antisense chr8:117887059 chr8:117887056 . . 0 24 hm5C_associated_SNPs_117347 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr8:117887048-117887075
64251 chr1 151239760 151239760 1 + C A UCEC 151239759 + 151239739 151239779 41 ATTCGAAATGCTATGGGCTCCCTGGCCTCCCAGGCCACCAA ATTCGAAATGCTATGGGCTCCATGGCCTCCCAGGCCACCAA < 41bp 0.471536501956159 0.725142952712285 0.06492865 0.2029554 prediction 0.450285905424571 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151239759 chr1:151239760 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_117348 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:151239728-151239763
64251 chr1 65695459 65695459 1 + A G rs147757628 65695456 + 65695436 65695476 41 GTGTCCATTGGATTGTGCCCCGAAGTGGCCTTTACCCTTGA GTGTCCATTGGATTGTGCCCCGAGGTGGCCTTTACCCTTGA < 41bp 0.502764683124921 0.72790441952292 0.54260695 0.9126744 prediction 0.450279472795998 Functional Gain - AK4 ENSG00000162433 UTR3 Human protein_coding chr1:65695456 chr1:65695459 . . 0 24 hm5C_associated_SNPs_117350 0 0 2 FAM120A POSTAR2 ENCODE chr1:65695450-65695494
64251 chr12 50232354 50232354 1 - G T THCA 50232355 - 50232335 50232375 41 CACTTCCACTCCCTTGCCATCCGAGGTGACATGCCCAATCA CACTTCCACTCCCTTGCCATCAGAGGTGACATGCCCAATCA < 41bp 0.59389644868491 0.819022879027596 0.9408528 0.95346653 prediction 0.450252860685372 Functional Gain - BCDIN3D ENSG00000186666 CDS Human protein_coding chr12:50232355 chr12:50232354 synonymous SNV . 0 22 hm5C_associated_SNPs_117352 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:50232334-50232416
64251 chr16 90001587 90001587 1 + C T READ 90001586 + 90001566 90001606 41 TCACCACCTCCTTGCGCTTCCCGGGCCAGCTCAACGCTGAC TCACCACCTCCTTGCGCTTCCTGGGCCAGCTCAACGCTGAC < 41bp 0.539529252588724 0.764655502761793 0.87733096 0.49490017 prediction 0.450252500346139 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001586 chr16:90001587 nonsynonymous SNV 0.608 4 22 hm5C_associated_SNPs_117353 1 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:90001556-90001597
64251 chr17 30807671 30807671 1 + C G rs148367648 30807670 + 30807650 30807690 41 GTGAGTGCTGGCTTCAGGACCCCAGGGCTGGGCAGCTCTGT GTGAGTGCTGGCTTCAGGACCGCAGGGCTGGGCAGCTCTGT < 41bp 0.415942502096972 0.725114675743418 0.07658273 0.40960264 prediction 0.450229351486837 Functional Gain - PSMD11 ENSG00000108671 UTR3 Human protein_coding chr17:30807670 chr17:30807671 . . 0 22 hm5C_associated_SNPs_117354 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:30807536-30807678
64251 chr22 41918965 41918965 1 + C T UCEC 41918964 + 41918944 41918984 41 ACTCCAGGTTCCGAGCAGATCCGCGCCACCATTGAGCGGGA ACTCCAGGTTCCGAGCAGATCTGCGCCACCATTGAGCGGGA < 41bp 0.578180201875453 0.803283330761446 0.33036935 0.3475155 prediction 0.450206257771987 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41918964 chr22:41918965 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_117359 0 0 2 RPS3 POSTAR2 ENCODE chr22:41918940-41918975
64251 chr2 70164402 70164402 1 + A G SKCM 70164399 + 70164379 70164419 41 TGTGACAGAAAAGCCGTTCACCAAATCGACCAGCTTCAGCG TGTGACAGAAAAGCCGTTCACCAGATCGACCAGCTTCAGCG < 41bp 0.531602984617645 0.756698603443759 0.24608019 0.44188705 prediction 0.450191237652229 Functional Gain - MXD1 ENSG00000059728 CDS Human protein_coding chr2:70164399 chr2:70164402 synonymous SNV . 0 24 hm5C_associated_SNPs_117365 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:70164378-70164416
64251 chr16 31045639 31045639 1 + C G LUSC 31045638 + 31045618 31045658 41 CATCCTGGCCACGCCCCTTCCCGAGGAGAGTGAGTGAAACC CATCCTGGCCACGCCCCTTCCGGAGGAGAGTGAGTGAAACC < 41bp 0.584036834397106 0.809118045058796 0.5436252 0.9032656 prediction 0.450162421323379 Functional Gain - STX4 ENSG00000103496 CDS Human protein_coding chr16:31045638 chr16:31045639 synonymous SNV . 0 22 hm5C_associated_SNPs_117370 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr16:31045615-31045649
64251 chr14 72205845 72205845 1 + A G OV 72205842 + 72205822 72205862 41 TCGGACAAGCTGAAGAAGTTCACAGAATGGGTCTTCAACAC TCGGACAAGCTGAAGAAGTTCACGGAATGGGTCTTCAACAC < 41bp 0.498961081032222 0.725069383194995 0.12087038 0.2774952 prediction 0.45013876638999 Functional Gain - SIPA1L1 ENSG00000197555 CDS Human protein_coding chr14:72205842 chr14:72205845 synonymous SNV . 0 24 hm5C_associated_SNPs_117376 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr14:72205817-72205855
64251 chr17 7611341 7611341 1 + C T SKCM 7611340 + 7611320 7611360 41 ACCGGCTAGACCTGCTCTGCCCCCGGGCCCGGCCTCCTGGC ACCGGCTAGACCTGCTCTGCCTCCGGGCCCGGCCTCCTGGC < 41bp 0.610364875966103 0.835430117436339 0.14059943 0.32096082 prediction 0.45013048294047 Functional Gain - EFNB3 ENSG00000108947 CDS Human protein_coding chr17:7611340 chr17:7611341 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_117378 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7611331-7611366
64251 chr17 57647920 57647920 1 + A G LIHC 57647917 + 57647897 57647937 41 TGATTGGTGTAACTCAACCACGAAAAGTAGCTGCTATATCA TGATTGGTGTAACTCAACCACGAGAAGTAGCTGCTATATCA < 41bp 0.508366287081854 0.733427409932358 0.26961297 0.8524679 prediction 0.450122245701007 Functional Gain - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57647917 chr17:57647920 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_117381 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:57647889-57647920
64251 chr6 37414221 37414221 1 + C T SKCM 37414220 + 37414200 37414240 41 ACGTGGACTGGCGAGATGAGCCAGAGGTAAGTGTTAAAGTG ACGTGGACTGGCGAGATGAGCTAGAGGTAAGTGTTAAAGTG < 41bp 0.567031579728324 0.792078942751698 0.9008893 0.66771114 prediction 0.450094726046748 Functional Gain - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37414220 chr6:37414221 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_117384 0 0 7 DDX24 POSTAR2 ENCODE chr6:37414189-37414225
64251 chr19 17836873 17836873 1 + T A PRAD 17836869 + 17836849 17836889 41 AGCCACCGTCCCCCTTCGAGCTGCTGGAGCCCCCGACCTCC AGCCACCGTCCCCCTTCGAGCTGCAGGAGCCCCCGACCTCC < 41bp 0.662754357175197 0.887796867185685 0.5888045 0.62149096 prediction 0.450085020020975 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836869 chr19:17836873 nonsynonymous SNV 0.097 3 25 hm5C_associated_SNPs_117388 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17836818-17836917
64251 chr9 33351713 33351713 1 + A G UCEC 33351710 + 33351690 33351730 41 AAGCAGCCCTGCACCACCCCCAGAGCTGACTGTGGTCACCC AAGCAGCCCTGCACCACCCCCAGGGCTGACTGTGGTCACCC < 41bp 0.566911558001365 0.791952901079681 0.885428 0.93023527 prediction 0.450082686156633 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33351710 chr9:33351713 synonymous SNV . 0 24 hm5C_associated_SNPs_117389 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:33351700-33351720
64251 chr8 26501001 26501001 1 + C A rs138088405 26500997 + 26500977 26501017 41 CATCACTGCCAGCTTGGGAACGGACGGCTCCCATTACTGGA CATCACTGCCAGCTTGGGAACGGAAGGCTCCCATTACTGGA < 41bp 0.306140953496895 0.725034202641429 0.37046802 0.7524164 prediction 0.450068405282858 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26500997 chr8:26501001 nonsynonymous SNV 0.487 3 25 hm5C_associated_SNPs_117394 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:26500980-26501009
64251 chr5 118835030 118835030 1 + A G BRCA 118835027 + 118835007 118835047 41 CTTAGGCTGGAGCTATTGGCCAGAAACTCCCTCCATTTTCT CTTAGGCTGGAGCTATTGGCCAGGAACTCCCTCCATTTTCT < 41bp 0.515494398962799 0.74052836643392 0.023033798 0.034508467 prediction 0.450067934942241 Functional Gain - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118835027 chr5:118835030 nonsynonymous SNV 0.956 0 24 hm5C_associated_SNPs_117395 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:118835020-118835040
64251 chr2 48030619 48030619 1 + T C UCEC 48030616 + 48030596 48030636 41 TGATGGTCCTATGTGTCGCCCAGTAATTCTGTTGCCGGAAG TGATGGTCCTATGTGTCGCCCAGCAATTCTGTTGCCGGAAG < 41bp 0.499496670981949 0.725031882086513 0.52795935 0.5119731 prediction 0.450063764173027 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48030616 chr2:48030619 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_117396 3 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr2:48030561-48030632
64251 chr11 82644518 82644518 1 + C A LGG 82644514 + 82644494 82644534 41 GAACATCTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTT GAACATCTTTGGCAGAAAGTCACCATTCAGAGTCTGATTTT < 41bp 0.314749343145512 0.725028874316669 0.068862915 0.015328884 prediction 0.450057748633339 Functional Gain - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82644514 chr11:82644518 nonsynonymous SNV 0.376 0 25 hm5C_associated_SNPs_117397 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr11:82644512-82644567
64251 chr22 21141204 21141204 1 + C A LAML 21141203 + 21141183 21141223 41 CACAGTGAACGAGGAAGGCACCCAAGCCACCACTGTGACCA CACAGTGAACGAGGAAGGCACACAAGCCACCACTGTGACCA < 41bp 0.586422208883654 0.811441951553144 0.16578671 0.04599324 prediction 0.450039485338979 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21141203 chr22:21141204 synonymous SNV . 0 22 hm5C_associated_SNPs_117400 0 0 2 SND1 POSTAR2 ENCODE chr22:21141163-21141253
64251 chr19 11094862 11094862 1 + C T LUSC 11094861 + 11094841 11094881 41 ACCCACCCCTGGGCGGAACTCCTCGGCCAGGTCCTTCCCCG ACCCACCCCTGGGCGGAACTCTTCGGCCAGGTCCTTCCCCG < 41bp 0.484039744760001 0.725016083043327 0.40590352 0.33668327 prediction 0.450032166086655 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11094861 chr19:11094862 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_117402 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:11094856-11094894
64251 chr3 105243209 105243209 1 + C T rs141090189 105243208 + 105243188 105243228 41 GTGTGCAGTACGACGATGTACCAGAATACAAAGACAGATTG GTGTGCAGTACGACGATGTACTAGAATACAAAGACAGATTG < 41bp 0.474276162033702 0.725013577425071 0.016150594 0.033060044 prediction 0.450027154850142 Functional Gain - ALCAM ENSG00000170017 CDS Human protein_coding chr3:105243208 chr3:105243209 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_117403 0 0 1 SND1 POSTAR2 ENCODE chr3:105243201-105243259
64251 chr18 29126330 29126330 1 + C A COAD 29126326 + 29126306 29126346 41 TGGTCACTGAAAGAGTAATACAGCCTCATGGGGGTGGATCG TGGTCACTGAAAGAGTAATACAGCATCATGGGGGTGGATCG < 41bp 0.324534315662637 0.725012183396536 0.4250961 0.34843013 prediction 0.450024366793072 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29126326 chr18:29126330 nonsynonymous SNV 0.442 4 25 hm5C_associated_SNPs_117404 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29126285-29126369
64251 chr1 52811808 52811808 1 + C T STAD 52811807 + 52811787 52811827 41 ATCTGGACAGCGCCTTGGTGCCGGTGATCCATGGAGGGGCC ATCTGGACAGCGCCTTGGTGCTGGTGATCCATGGAGGGGCC < 41bp 0.493187918788942 0.725001929718747 0.23217899 0.18351585 prediction 0.450003859437494 Functional Gain - ZFYVE9 ENSG00000157077 CDS Human protein_coding chr1:52811807 chr1:52811808 nonsynonymous SNV 0.974 4 22 hm5C_associated_SNPs_117409 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:52811807-52811808
64251 chr7 141464393 141464393 1 + C T COAD 141464392 + 141464372 141464412 41 GCTCTTATCCTGTGGTAGTACCGCATCTCTGATCAATGAGT GCTCTTATCCTGTGGTAGTACTGCATCTCTGATCAATGAGT < 41bp 0.514456623991428 0.739454236471604 0.09959301 0.13531336 prediction 0.449995224960353 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464392 chr7:141464393 synonymous SNV . 0 22 hm5C_associated_SNPs_117412 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:141464378-141464405
64251 chr22 19119973 19119973 1 - G A BRCA 19119974 - 19119954 19119994 41 TCATGCTAGGTGCTTGCTTTCCCCACCTCAGCTCCGGAGAT TCATGCTAGGTGCTTGCTTTCTCCACCTCAGCTCCGGAGAT < 41bp 0.510203080262434 0.735188629987601 0.068461716 0.8899249 prediction 0.449971099450335 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19119974 chr22:19119973 nonsynonymous SNV 0.980 0 22 hm5C_associated_SNPs_117418 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:19119952-19119977
64251 chr3 133098900 133098900 1 + A G LUSC 133098897 + 133098877 133098917 41 CATTCTGAAAGCTCCCTGTCCACAGGGCCCGCTCCAGCAGC CATTCTGAAAGCTCCCTGTCCACGGGGCCCGCTCCAGCAGC < 41bp 0.467783533796987 0.724976006379119 0.12654111 0.54004323 prediction 0.449952012758238 Functional Gain - TMEM108 ENSG00000144868 CDS Human protein_coding chr3:133098897 chr3:133098900 synonymous SNV . 0 24 hm5C_associated_SNPs_117421 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:133098861-133098937
64251 chr19 3204576 3204576 1 + C T rs145485457 3204575 + 3204555 3204595 41 GCGCCTCCGGCTGCAGGTGGCCGCGCACCAGTTCCCTGAGG GCGCCTCCGGCTGCAGGTGGCTGCGCACCAGTTCCCTGAGG < 41bp 0.520657773264319 0.745623005318368 0.2092492 0.22851443 prediction 0.449930464108099 Functional Gain - NCLN ENSG00000125912 CDS Human protein_coding chr19:3204575 chr19:3204576 synonymous SNV . 0 22 hm5C_associated_SNPs_117423 0 0 1 SND1 POSTAR2 ENCODE chr19:3204570-3204596
64251 chr3 38565525 38565525 1 + C T SKCM 38565524 + 38565504 38565544 41 ATGAAGCCATCGGCTTCCAGCCCCAGTTAACTGAATTCCAA ATGAAGCCATCGGCTTCCAGCTCCAGTTAACTGAATTCCAA < 41bp 0.598550531285951 0.823507197331741 0.054680258 0.16030425 prediction 0.44991333209158 Functional Gain - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565524 chr3:38565525 nonsynonymous SNV 0.878 0 22 hm5C_associated_SNPs_117428 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:38565520-38565540
64251 chr2 238668824 238668824 1 + A G UCEC 238668821 + 238668801 238668841 41 CAAAAGAAGAGTTAAATGCCCTCAAGTCGACAGGGGATGGG CAAAAGAAGAGTTAAATGCCCTCGAGTCGACAGGGGATGGG < 41bp 0.531609188593696 0.756565169010703 0.2106899 0.62591064 prediction 0.449911960834013 Functional Gain - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238668821 chr2:238668824 nonsynonymous SNV 0.873 2 24 hm5C_associated_SNPs_117429 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:238668823-238668851
64251 chr20 43703921 43703921 1 + C T rs189966758 43703920 + 43703900 43703940 41 ACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTC ACTTCTGCTCTGTCGTCTCTCTACAGCACCTTTGTGAACTC < 41bp 0.538538982908808 0.763492716193623 0.1256913 0.81415355 prediction 0.44990746656963 Functional Gain - STK4 ENSG00000101109 UTR3 Human protein_coding chr20:43703920 chr20:43703921 . . 0 22 hm5C_associated_SNPs_117431 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:43703856-43703931
64251 chr1 32793179 32793179 1 + T C rs555113155 32793177 + 32793157 32793197 41 ACATTGACATTGATATTCACCATGGTGACGGCGTGGAAGAG ACATTGACATTGATATTCACCACGGTGACGGCGTGGAAGAG < 41bp 0.467073927834986 0.724943977200627 0.059592247 0.15877578 prediction 0.449887954401253 Functional Gain - HDAC1 ENSG00000116478 CDS Human protein_coding chr1:32793177 chr1:32793179 synonymous SNV . 0 23 hm5C_associated_SNPs_117434 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32793149-32793193
64251 chr19 56171941 56171941 1 + C T BRCA 56171940 + 56171920 56171960 41 AATACTGGGACGTGCCACCCCCAGGCTTTGAGCACATCACC AATACTGGGACGTGCCACCCCTAGGCTTTGAGCACATCACC < 41bp 0.475196422707656 0.724941350807666 0.08553141 0.036360174 prediction 0.449882701615332 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56171940 chr19:56171941 nonsynonymous SNV 0.082 1 22 hm5C_associated_SNPs_117435 0 0 22 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:56171880-56171960
64251 chr5 131607089 131607089 1 + C A LUAD 131607088 + 131607068 131607108 41 GCTGCGGGAGCCAGCCGAGCCCGTGGCCGCGGAGCCCAAGC GCTGCGGGAGCCAGCCGAGCCAGTGGCCGCGGAGCCCAAGC < 41bp 0.465276724385604 0.724925493151795 0.84606487 0.8257239 prediction 0.44985098630359 Functional Gain - PDLIM4 ENSG00000131435 CDS Human protein_coding chr5:131607088 chr5:131607089 synonymous SNV . 0 22 hm5C_associated_SNPs_117441 0 0 1 PUM2 POSTAR2 ENCODE chr5:131607054-131607094
64251 chr2 241528883 241528883 1 + C A LUAD 241528882 + 241528862 241528902 41 CTGCAGAAGAGCAGGCACCTCCTGGACCAGGTGCGGGGCCC CTGCAGAAGAGCAGGCACCTCATGGACCAGGTGCGGGGCCC < 41bp 0.469981269870615 0.724924606141855 0.3124012 0.3746177 prediction 0.44984921228371 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241528882 chr2:241528883 nonsynonymous SNV 0.995 5 22 hm5C_associated_SNPs_117443 0 0 3 BUD13 POSTAR2 ENCODE chr2:241528838-241528887
64251 chr14 103576729 103576729 1 + C A rs372270295 103576725 + 103576705 103576745 41 AGCTGTCAGGCCAGAAGGAGCAGCCGTGCAGGAGGCATTTC AGCTGTCAGGCCAGAAGGAGCAGCAGTGCAGGAGGCATTTC < 41bp 0.689775899135115 0.914692078298151 0.4993995 0.49345487 prediction 0.449832358326072 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103576725 chr14:103576729 unknown . 0 25 hm5C_associated_SNPs_117446 0 0 3 CSTF2T POSTAR2 ENCODE chr14:103576688-103576732
64251 chr14 39650383 39650383 1 + C T SKCM 39650382 + 39650362 39650402 41 GCTTCAGCTTCAATCCCAGTCCCAACCAGTACTCCAGTCCC GCTTCAGCTTCAATCCCAGTCTCAACCAGTACTCCAGTCCC < 41bp 0.573663687153665 0.79856447608793 0.055357605 0.027060509 prediction 0.449801577868529 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650382 chr14:39650383 synonymous SNV . 0 22 hm5C_associated_SNPs_117450 0 0 27 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:39650335-39650439
64251 chr6 43096755 43096755 1 + C T HNSC 43096754 + 43096734 43096774 41 CTTCATCAAGCAGCCGTCCTCCCAGGATGCACTGCAGGGGC CTTCATCAAGCAGCCGTCCTCTCAGGATGCACTGCAGGGGC < 41bp 0.59009084774668 0.814989743953412 0.23045942 0.05078736 prediction 0.449797792413464 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096754 chr6:43096755 synonymous SNV . 0 22 hm5C_associated_SNPs_117451 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:43096749-43096775
64251 chr11 43861571 43861571 1 + A G UCEC 43861568 + 43861548 43861588 41 GACTTTTGTAGATTTCTTCTCTCAGTGCCTCCATGAGGAGT GACTTTTGTAGATTTCTTCTCTCGGTGCCTCCATGAGGAGT < 41bp 0.550381942923155 0.775276594085574 0.008061826 0.036330223 prediction 0.449789302324838 Functional Gain - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43861568 chr11:43861571 nonsynonymous SNV 0.885 1 24 hm5C_associated_SNPs_117453 0 0 7 SRRM4 POSTAR2 GSE57278,GSM1378374 chr11:43861560-43861580
64251 chr19 7987008 7987008 1 + T C STAD 7987006 + 7986986 7987026 41 GCCCGTGGAAAGCCTTTGCTCCTGAGCGCCCCTGGAGGACA GCCCGTGGAAAGCCTTTGCTCCCGAGCGCCCCTGGAGGACA < 41bp 0.597019489865794 0.821909966202024 0.04401505 0.0520249 prediction 0.449780952672461 Functional Gain - SNAPC2 ENSG00000104976 CDS Human protein_coding chr19:7987006 chr19:7987008 nonsynonymous SNV 0.002 3 23 hm5C_associated_SNPs_117455 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7986994-7987023
64251 chr17 5392534 5392534 1 + C T HNSC 5392533 + 5392513 5392553 41 GAGGAAGATTTTCAGCATCTCCAGAAAGAAATTGAACAGTT GAGGAAGATTTTCAGCATCTCTAGAAAGAAATTGAACAGTT < 41bp 0.551035696132904 0.775923150967075 0.42885938 0.5847745 prediction 0.449774909668342 Functional Gain - MIS12 ENSG00000167842 CDS Human protein_coding chr17:5392533 chr17:5392534 stopgain 0.979 1 22 hm5C_associated_SNPs_117456 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:5392509-5392576
64251 chr1 21887136 21887136 1 + A G STAD 21887133 + 21887113 21887153 41 GTTTAGAGAAAGAGAAAGACCCCAAGTACTGGCGAGACCAA GTTTAGAGAAAGAGAAAGACCCCGAGTACTGGCGAGACCAA < 41bp 0.540607877551104 0.765491841531612 0.29831868 0.35937828 prediction 0.449767927961017 Functional Gain - ALPL ENSG00000162551 CDS Human protein_coding chr1:21887133 chr1:21887136 nonsynonymous SNV 0.804 1 24 hm5C_associated_SNPs_117457 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:21887135-21887160
64251 chr2 99204056 99204056 1 + A G UCEC 99204053 + 99204033 99204073 41 AGGCCTCCCGAAGGGACTTACGGAAAAGTTGAAACGTGAAC AGGCCTCCCGAAGGGACTTACGGGAAAGTTGAAACGTGAAC < 41bp 0.500865590850575 0.725745566749753 0.29302955 0.6002521 prediction 0.449759951798357 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99204053 chr2:99204056 synonymous SNV . 0 24 hm5C_associated_SNPs_117459 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:99204052-99204073
64251 chr1 28975127 28975127 1 + C G rs192651029 28975123 + 28975103 28975143 41 AGAGAAAGCAAAAAGGGCTTCTGTCGTGAGTGGCACACGTA AGAGAAAGCAAAAAGGGCTTCTGTGGTGAGTGGCACACGTA < 41bp 0.457489059711705 0.724879558401417 0.27047446 0.6044982 prediction 0.449759116802833 Functional Gain - LINC01715;RNU11 ENSG00000270103 ncRNA_exonic Human lincRNA chr1:28975123 chr1:28975127 . . 0 25 hm5C_associated_SNPs_117460 0 0 44 SRSF1 POSTAR2 GSE83923,GSM2221668 chr1:28975100-28975140
64251 chr7 37960474 37960474 1 + C G LUSC 37960470 + 37960450 37960490 41 CGGAAAGAGCCGGCGGGAGCCACTCTGATCCCGGACGCCTC CGGAAAGAGCCGGCGGGAGCCACTGTGATCCCGGACGCCTC < 41bp 0.501355815421008 0.726233722131155 0.22624865 0.42612082 prediction 0.449755813420295 Functional Gain - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960470 chr7:37960474 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_117462 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:37960473-37960474
64251 chr6 170627561 170627561 1 + C T LUSC 170627560 + 170627540 170627580 41 CATGTGTACAGGCCCTGAATCCAGGCGAGAAGTTCCCGTGT CATGTGTACAGGCCCTGAATCTAGGCGAGAAGTTCCCGTGT < 41bp 0.516924311529734 0.741799345138692 0.9035748 0.88996005 prediction 0.449750067217917 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627560 chr6:170627561 synonymous SNV . 0 22 hm5C_associated_SNPs_117463 0 0 3 CPSF4 POSTAR2 GSE37401,GSM917667 chr6:170627545-170627577
64251 chr4 1806134 1806134 1 + C A UCEC 1806133 + 1806113 1806153 41 AGCTACGGGGTGGGCTTCTTCCTGTTCATCCTGGTGGTGGC AGCTACGGGGTGGGCTTCTTCATGTTCATCCTGGTGGTGGC < 41bp 0.47320722507073 0.724874960552171 0.096571594 0.43933955 prediction 0.449749921104343 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1806133 chr4:1806134 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_117464 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:1806114-1806136
64251 chr20 56940423 56940423 1 + C A rs564028455 56940422 + 56940402 56940442 41 GGCCCACTGGCATGAGTAGTCCCTGTGCCCATGCCCATGGT GGCCCACTGGCATGAGTAGTCACTGTGCCCATGCCCATGGT < 41bp 0.502293567377311 0.72716751521779 0.18930373 0.18384475 prediction 0.449747895680959 Functional Gain - RAB22A ENSG00000124209 UTR3 Human protein_coding chr20:56940422 chr20:56940423 . . 0 22 hm5C_associated_SNPs_117466 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:56940395-56940433
64251 chr20 43108645 43108645 1 + C A LIHC 43108644 + 43108624 43108664 41 GGGACCTTGGTAGCTAATGTCCGAAGAAAGTGACTCTCTGA GGGACCTTGGTAGCTAATGTCAGAAGAAAGTGACTCTCTGA < 41bp 0.602546116493864 0.827419995140262 0.31123227 0.85467505 prediction 0.449747757292795 Functional Gain - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43108644 chr20:43108645 synonymous SNV . 0 22 hm5C_associated_SNPs_117467 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:43108629-43108671
64251 chrX 30269093 30269093 1 + T G LUSC 30269090 + 30269070 30269110 41 TCTCGCCGCTTGGAGCTCGTCTTTGGCCTTGATTTGAAGGA TCTCGCCGCTTGGAGCTCGTCTTGGGCCTTGATTTGAAGGA < 41bp 0.319347417640159 0.724866028609179 0.06105882 0.1332035 prediction 0.449732057218358 Functional Gain - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30269090 chrX:30269093 nonsynonymous SNV 0.866 4 24 hm5C_associated_SNPs_117474 0 0 1 SND1 POSTAR2 ENCODE chrX:30269043-30269126
64251 chr1 114454054 114454054 1 + C T KIRC 114454053 + 114454033 114454073 41 CTCTGACCATTCCTCTTACTCCGAGCTTCGTGCCTTTGTCG CTCTGACCATTCCTCTTACTCTGAGCTTCGTGCCTTTGTCG < 41bp 0.521707549177889 0.746556153295149 0.931491 0.49150953 prediction 0.44969720823452 Functional Gain - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114454053 chr1:114454054 synonymous SNV . 0 22 hm5C_associated_SNPs_117478 0 0 12 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:114453993-114454054
64251 chr17 5392333 5392333 1 + C A UCEC 5392332 + 5392312 5392352 41 CTGAAGAAGCTGGATGGCATCCCAGACTGTGACATTAGCCC CTGAAGAAGCTGGATGGCATCACAGACTGTGACATTAGCCC < 41bp 0.476229247373922 0.724848209334295 0.14982677 0.14569679 prediction 0.44969641866859 Functional Gain - MIS12 ENSG00000167842 CDS Human protein_coding chr17:5392332 chr17:5392333 nonsynonymous SNV 0.983 1 22 hm5C_associated_SNPs_117479 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:5392247-5392365
64251 chr17 73781000 73781000 1 + C T DLBC 73780999 + 73780979 73781019 41 GCCCGGCGGCTCCGCAGCTTCCTCGGCGCCCCCGGCCGCTA GCCCGGCGGCTCCGCAGCTTCTTCGGCGCCCCCGGCCGCTA < 41bp 0.529056045967919 0.753904110669121 0.18630147 0.3728687 prediction 0.449696129402403 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73780999 chr17:73781000 synonymous SNV . 0 22 hm5C_associated_SNPs_117480 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:73780960-73781000
64251 chr6 43267187 43267187 1 + C T PRAD 43267186 + 43267166 43267206 41 TGCGTCCACTTTCTTCTTCGCCGGTGTGCTGGTGGGGGCTG TGCGTCCACTTTCTTCTTCGCTGGTGTGCTGGTGGGGGCTG < 41bp 0.536427823690588 0.761272418579968 0.32196152 0.24510565 prediction 0.44968918977876 Functional Gain - SLC22A7 ENSG00000137204 CDS Human protein_coding chr6:43267186 chr6:43267187 synonymous SNV . 0 22 hm5C_associated_SNPs_117481 0 0 3 GRWD1 POSTAR2 ENCODE chr6:43267179-43267251
64251 chr1 154229623 154229623 1 + C A rs188079310 154229622 + 154229602 154229642 41 AGCACAGTCTCTGCACCTCCCCCAGTGGTCAGTGTCTCCTC AGCACAGTCTCTGCACCTCCCACAGTGGTCAGTGTCTCCTC < 41bp 0.467002228978849 0.724837008376858 0.006124735 0.071991116 prediction 0.449674016753716 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229622 chr1:154229623 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_117486 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:154229588-154229623
64251 chr12 58166845 58166845 1 + C T COAD 58166844 + 58166824 58166864 41 GAGAGTCAAAATGTGGATTTCCGAGGCAAGAAGGTGATCGA GAGAGTCAAAATGTGGATTTCTGAGGCAAGAAGGTGATCGA < 41bp 0.561996564018658 0.786827604852886 0.9124967 0.84267557 prediction 0.449662081668456 Functional Gain - EEF1AKMT3 ENSG00000123427;ENSG00000257921 CDS Human other chr12:58166844 chr12:58166845 stopgain 1.000 0 22 hm5C_associated_SNPs_117487 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr12:58166826-58166863
64251 chr21 35497680 35497680 1 + C G COAD 35497679 + 35497659 35497699 41 TTGAAACGTACGATAGAGGCCCTGATGGACAGAGGAGCAAT TTGAAACGTACGATAGAGGCCGTGATGGACAGAGGAGCAAT < 41bp 0.411347877324582 0.724829660253091 0.06895381 0.11204451 prediction 0.449659320506182 Functional Gain - MRPS6 ENSG00000243927 CDS Human protein_coding chr21:35497679 chr21:35497680 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_117488 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:35497640-35497724
64251 chr11 2943404 2943404 1 + C G COAD 2943400 + 2943380 2943420 41 GAGGTGCTGCTCCGGGCCAGCGTGCTGGTCTTCATCGTGGT GAGGTGCTGCTCCGGGCCAGCGTGGTGGTCTTCATCGTGGT < 41bp 0.430148403750859 0.724829247973227 0.39797264 0.8334778 prediction 0.449658495946453 Functional Gain - SLC22A18 ENSG00000110628 CDS Human protein_coding chr11:2943400 chr11:2943404 nonsynonymous SNV 0.428 0 25 hm5C_associated_SNPs_117490 0 0 4 PPIG POSTAR2 ENCODE chr11:2943317-2943422
64251 chr16 720707 720707 1 + C A rs3743910 720703 + 720683 720723 41 CGCGTGCGCCCAGGCGCTGACGCGCATCTTCAGGCTCTCAG CGCGTGCGCCCAGGCGCTGACGCGAATCTTCAGGCTCTCAG < 41bp 0.711265802284883 0.936080609083445 0.39071804 0.8036218 prediction 0.449629613597125 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:720703 chr16:720707 synonymous SNV . 0 25 hm5C_associated_SNPs_117494 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr16:720692-720720
64251 chr19 11143993 11143993 1 + C T BLCA 11143992 + 11143972 11144012 41 CAAGCGCAGGACCGAGCCCACCGCATCGGGCAGCAGAACGA CAAGCGCAGGACCGAGCCCACTGCATCGGGCAGCAGAACGA < 41bp 0.468495652663076 0.724812313037394 0.23498294 0.26213464 prediction 0.449624626074787 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11143992 chr19:11143993 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_117495 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11143977-11143999
64251 chr6 44201251 44201251 1 + C T UCEC 44201250 + 44201230 44201270 41 GCTGTTTTCTCCTTCCTGTTCCGGGCAATTGTGTGACAAAG GCTGTTTTCTCCTTCCTGTTCTGGGCAATTGTGTGACAAAG < 41bp 0.52195935890009 0.746768625061119 0.4017122 0.14739805 prediction 0.449618532322057 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44201250 chr6:44201251 nonsynonymous SNV 0.315 3 22 hm5C_associated_SNPs_117496 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44201236-44201274
64251 chr22 47274574 47274574 1 + C T SKCM 47274573 + 47274553 47274593 41 ATTACGGAGGTTGAGCTGGTCCGGAATCCCTAAGCCAGTGC ATTACGGAGGTTGAGCTGGTCTGGAATCCCTAAGCCAGTGC < 41bp 0.541675291080097 0.766468328187909 0.6735777 0.52620107 prediction 0.449586074215624 Functional Gain - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47274573 chr22:47274574 synonymous SNV . 0 22 hm5C_associated_SNPs_117501 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr22:47274553-47274577
64251 chr18 19079939 19079939 1 + C T CESC 19079938 + 19079918 19079958 41 GACCCAGGACCCTCCCATGGCCGGGACAGCCCATCAGAGGC GACCCAGGACCCTCCCATGGCTGGGACAGCCCATCAGAGGC < 41bp 0.551265654387038 0.77605639730627 0.6110021 0.43494108 prediction 0.449581485838464 Functional Gain - GREB1L ENSG00000141449 CDS Human protein_coding chr18:19079938 chr18:19079939 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_117502 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:19079885-19079945
64251 chr1 10659333 10659333 1 + T G rs77261230 10659330 + 10659310 10659350 41 AGATTGATATGGCCTTCCAGCAGTCGGGCACTGCTGCCGAT AGATTGATATGGCCTTCCAGCAGGCGGGCACTGCTGCCGAT < 41bp 0.325830775781983 0.724786280692533 0.1883437 0.90865767 prediction 0.449572561385065 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10659330 chr1:10659333 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_117503 1 0 7 BUD13 POSTAR2 ENCODE chr1:10659311-10659385
64251 chr4 2899946 2899946 1 + C T SKCM 2899945 + 2899925 2899965 41 ATGTGGCCTCTTGCCAATCTCCCCGGAGGCGCTTTCCCTTG ATGTGGCCTCTTGCCAATCTCTCCGGAGGCGCTTTCCCTTG < 41bp 0.575965542109016 0.800747850121413 0.1531952 0.7067235 prediction 0.449564616024793 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2899945 chr4:2899946 synonymous SNV . 0 22 hm5C_associated_SNPs_117505 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:2899924-2899966
64251 chr2 43986079 43986079 1 + C T BLCA 43986078 + 43986058 43986098 41 TCAACCAGATGGATGGCCCTCCGGGGACACAGTGCTGCTGA TCAACCAGATGGATGGCCCTCTGGGGACACAGTGCTGCTGA < 41bp 0.553303889190535 0.778075430159576 0.9114033 0.83713907 prediction 0.449543081938082 Functional Gain - PLEKHH2 ENSG00000152527 CDS Human protein_coding chr2:43986078 chr2:43986079 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_117507 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:43986066-43986091
64251 chr5 70805733 70805733 1 + C T SKCM 70805732 + 70805712 70805752 41 AGCTGGAAGAAGAGAAATATCCCCACAGAAAAATGGCCCAG AGCTGGAAGAAGAGAAATATCTCCACAGAAAAATGGCCCAG < 41bp 0.561933361024326 0.786704577986911 0.16073483 0.9270455 prediction 0.449542433925172 Functional Gain - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70805732 chr5:70805733 synonymous SNV . 0 22 hm5C_associated_SNPs_117509 0 0 4 BUD13 POSTAR2 ENCODE chr5:70805697-70805735
64251 chr12 51126176 51126176 1 + C T SKCM 51126175 + 51126155 51126195 41 GGGATCAACCTCTCCTGCGTCCGGACCTGTGTGGTGGTGGC GGGATCAACCTCTCCTGCGTCTGGACCTGTGTGGTGGTGGC < 41bp 0.470387563106859 0.724760621790997 0.17823914 0.22080234 prediction 0.449521243581994 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51126175 chr12:51126176 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_117510 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr12:51126153-51126183
64251 chr3 51978458 51978458 1 + A G STAD 51978455 + 51978435 51978475 41 CTTCACAAGGCTAGAAGATGCAAAGAAGGACTTTGAGAAGA CTTCACAAGGCTAGAAGATGCAAGGAAGGACTTTGAGAAGA < 41bp 0.529442377158512 0.754200826852368 0.21081463 0.4193063 prediction 0.449516899387712 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51978455 chr3:51978458 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_117512 0 0 1 ZNF622 POSTAR2 ENCODE chr3:51978448-51978527
64251 chr14 93652850 93652850 1 + T A SKCM 93652846 + 93652826 93652866 41 GGGTGTGGACAGTTATTTTTCTGGTACCTTACTTACAGATG GGGTGTGGACAGTTATTTTTCTGGAACCTTACTTACAGATG < 41bp 0.664407541452115 0.889163925230813 0.16773805 0.1442934 prediction 0.449512767557396 Functional Gain - TMEM251 ENSG00000153485;ENSG00000259066 exonic;splicing Human other chr14:93652846 chr14:93652850 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_117515 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:93652823-93652874
64251 chr5 32712163 32712163 1 + C A STAD 32712159 + 32712139 32712179 41 ACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTCGCTTC ACGGGACTGGGAGGCGGCTTCTGCAGCCGGGCACTCGCTTC < 41bp 0.706882393551507 0.931625152098085 0.72790426 0.9085283 prediction 0.449485517093157 Functional Gain - NPR3 ENSG00000113389 CDS Human protein_coding chr5:32712159 chr5:32712163 nonsynonymous SNV 0.336 1 25 hm5C_associated_SNPs_117524 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:32712132-32712175
64251 chr19 35510321 35510321 1 + C T rs147041737 35510320 + 35510300 35510340 41 GTTCCGGCGCGGCCCCCAGGCCGGCGGGTGTGTGGTGGACT GTTCCGGCGCGGCCCCCAGGCTGGCGGGTGTGTGGTGGACT < 41bp 0.480155581925441 0.724740734564601 0.37810743 0.3578048 prediction 0.449481469129202 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35510320 chr19:35510321 synonymous SNV . 0 22 hm5C_associated_SNPs_117525 0 0 4 METAP2 POSTAR2 ENCODE chr19:35510302-35510337
64251 chr3 183858243 183858243 1 + A G LAML 183858240 + 183858220 183858260 41 GATCCACATGCACGTAACAGCTAAGGAATATGGTGCCCGTG GATCCACATGCACGTAACAGCTAGGGAATATGGTGCCCGTG < 41bp 0.555423784532502 0.780160387067987 0.33832836 0.3398335 prediction 0.44947320507097 Functional Gain - EIF2B5 ENSG00000145191 CDS Human protein_coding chr3:183858240 chr3:183858243 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_117528 0 0 2 U2AF2 POSTAR2 ENCODE chr3:183858191-183858252
64251 chr19 35761708 35761708 1 + C T LUAD 35761707 + 35761687 35761727 41 CCCGGACACACCCTTACTCTCCGTATGTGCAGGGGACACCT CCCGGACACACCCTTACTCTCTGTATGTGCAGGGGACACCT < 41bp 0.46314757110929 0.724733482334733 0.22063836 0.5652324 prediction 0.449466964669467 Functional Gain - USF2 ENSG00000105698 CDS Human protein_coding chr19:35761707 chr19:35761708 nonsynonymous SNV 0.982 1 22 hm5C_associated_SNPs_117530 0 0 2 PRPF8 POSTAR2 ENCODE chr19:35761665-35761750
64251 chr1 3328245 3328245 1 + C T LUAD 3328244 + 3328224 3328264 41 ACTTTCCCTCCAGGCCGCACCCGGGGAGCCTGCCCTTCTCC ACTTTCCCTCCAGGCCGCACCTGGGGAGCCTGCCCTTCTCC < 41bp 0.52705562945872 0.751781547357847 0.9568753 0.9421569 prediction 0.449451835798255 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3328244 chr1:3328245 nonsynonymous SNV 0.002 2 22 hm5C_associated_SNPs_117534 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:3328241-3328287
64251 chr17 2278842 2278842 1 + C T LUAD 2278841 + 2278821 2278861 41 GCCCCAGGACCCTGAAGATTCCAGACCAAAACCTGAGCAGG GCCCCAGGACCCTGAAGATTCTAGACCAAAACCTGAGCAGG < 41bp 0.564912831379455 0.789632577929015 0.893101 0.8766242 prediction 0.449439493099119 Functional Gain - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278841 chr17:2278842 synonymous SNV . 0 22 hm5C_associated_SNPs_117537 0 0 4 DDX24 POSTAR2 ENCODE chr17:2278788-2278856
64251 chr19 46375409 46375409 1 + C A COAD 46375408 + 46375388 46375428 41 CCCTGAATCCTCTAAGCTCTCCCTATCCCCCTGGGGGGCTC CCCTGAATCCTCTAAGCTCTCACTATCCCCCTGGGGGGCTC < 41bp 0.601553436355328 0.82626856691909 0.06641871 0.056229234 prediction 0.449430261127525 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375408 chr19:46375409 nonsynonymous SNV 0.900 3 22 hm5C_associated_SNPs_117540 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:46375405-46375443
64251 chr18 21109199 21109199 1 + C T UCEC 21109198 + 21109178 21109218 41 CCTCAAGAGGCCGGTGCGGACCCAGGCGGTGCTGGACCAGT CCTCAAGAGGCCGGTGCGGACTCAGGCGGTGCTGGACCAGT < 41bp 0.598350676055235 0.82305883332775 0.18565637 0.26200816 prediction 0.449416314545032 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21109198 chr18:21109199 synonymous SNV . 0 22 hm5C_associated_SNPs_117541 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr18:21109175-21109217
64251 chr6 157803183 157803183 1 + C T UCEC 157803182 + 157803162 157803202 41 CGGAGGAAATGGGAGGTGTTCCCGGGAAGAAACAAGTTCTT CGGAGGAAATGGGAGGTGTTCTCGGGAAGAAACAAGTTCTT < 41bp 0.525015630145125 0.749721391969952 0.6426054 0.24301443 prediction 0.449411523649654 Functional Gain - ZDHHC14 ENSG00000175048 CDS Human protein_coding chr6:157803182 chr6:157803183 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_117543 0 0 1 PPIG POSTAR2 ENCODE chr6:157803145-157803203
64251 chr5 74641438 74641438 1 + C A SKCM 74641437 + 74641417 74641457 41 CCTACTTTTGATTGACCTTTCCAGAGCAAGCACATTAGCAA CCTACTTTTGATTGACCTTTCAAGAGCAAGCACATTAGCAA < 41bp 0.578921103524947 0.803624036379788 0.77675676 0.42526272 prediction 0.449405865709684 Functional Gain - HMGCR ENSG00000113161 CDS Human protein_coding chr5:74641437 chr5:74641438 synonymous SNV . 0 22 hm5C_associated_SNPs_117544 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr5:74641418-74641446
64251 chr14 21464991 21464991 1 + C T SKCM 21464990 + 21464970 21465010 41 GCTCCTGGGGAGATCTTTTACCTGTGCTTACTCCGTCTGCG GCTCCTGGGGAGATCTTTTACTTGTGCTTACTCCGTCTGCG < 41bp 0.495107015321654 0.724697578788154 0.6042956 0.5844822 prediction 0.449395157576307 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464990 chr14:21464991 nonsynonymous SNV 0.960 3 22 hm5C_associated_SNPs_117546 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:21464934-21464997
64251 chr17 16321165 16321165 1 + A G UCEC 16321162 + 16321142 16321182 41 ATAAGAGTCAACCTCAACTACCGAAAGGGAACAGGTGCCAG ATAAGAGTCAACCTCAACTACCGGAAGGGAACAGGTGCCAG < 41bp 0.561824334416102 0.786521060130355 0.10789585 0.24029887 prediction 0.449393451428505 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16321162 chr17:16321165 synonymous SNV . 0 24 hm5C_associated_SNPs_117547 0 0 1 YBX3 POSTAR2 ENCODE chr17:16321151-16321182
64251 chr19 13264755 13264755 1 + C A rs567356468 13264751 + 13264731 13264771 41 GCAGACCTGAGGCGAGGCCACCCCCCTCCATCCTGGGGGAA GCAGACCTGAGGCGAGGCCACCCCACTCCATCCTGGGGGAA < 41bp 0.321659611530086 0.724689771877498 0.034581363 0.03284508 prediction 0.449379543754995 Functional Gain - IER2 ENSG00000267598 ncRNA_exonic Human antisense chr19:13264751 chr19:13264755 . . 0 25 hm5C_associated_SNPs_117549 0 0 4 CELF2 POSTAR2 GSE71264,GSM1831621 chr19:13264740-13264760
64251 chr12 13061468 13061468 1 + C T rs111650565 13061467 + 13061447 13061487 41 ACTGGACGGGAGCACAGGGCCCACACGCTTCTTCCTCTTTG ACTGGACGGGAGCACAGGGCCTACACGCTTCTTCCTCTTTG < 41bp 0.460081890398328 0.724679232831028 0.04213032 0.10485923 prediction 0.449358465662055 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061467 chr12:13061468 synonymous SNV . 0 22 hm5C_associated_SNPs_117552 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr12:13061387-13061514
64251 chr1 33764617 33764617 1 + C G rs55887741 33764616 + 33764596 33764636 41 GCCCCAGAGGACGGAGTCCCCCGGCATCCCGGTGCGAATCT GCCCCAGAGGACGGAGTCCCCGGGCATCCCGGTGCGAATCT < 41bp 0.650700736936155 0.875377083103492 0.8238376 0.9075347 prediction 0.449352692334675 Functional Gain - ZNF362 ENSG00000160094 CDS Human protein_coding chr1:33764616 chr1:33764617 synonymous SNV . 0 22 hm5C_associated_SNPs_117555 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:33764602-33764631
64251 chr8 145747771 145747771 1 + C G rs375201938 145747767 + 145747747 145747787 41 GCCCCACACACGGCTCAGCGCACACTGCGCGGCTTCCACCT GCCCCACACACGGCTCAGCGCACAGTGCGCGGCTTCCACCT < 41bp 0.428501429826319 0.724674883223384 0.022174686 0.22595844 prediction 0.449349766446768 Functional Gain - LRRC14;LRRC24 ENSG00000160959;ENSG00000254402 UTR3 Human other chr8:145747767 chr8:145747771 . . 0 25 hm5C_associated_SNPs_117556 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr8:145747766-145747792
64251 chr2 24239089 24239089 1 + C G MESO 24239088 + 24239068 24239108 41 GTGTCTGGGGCGGCTGCTGACCCTGTGGCTGGGTTCTTCAT GTGTCTGGGGCGGCTGCTGACGCTGTGGCTGGGTTCTTCAT < 41bp 0.395933062642767 0.724674227324365 0.0674274 0.2351996 prediction 0.449348454648729 Functional Gain - MFSD2B ENSG00000205639 CDS Human protein_coding chr2:24239088 chr2:24239089 nonsynonymous SNV 0.877 4 22 hm5C_associated_SNPs_117558 0 0 1 NONO POSTAR2 ENCODE chr2:24239079-24239139
64251 chr8 125487275 125487275 1 + C A rs545250294 125487271 + 125487251 125487291 41 GGCGGAGTTGCCCGCCTTAGCCCCCGCCCCCGGCCGCGGCC GGCGGAGTTGCCCGCCTTAGCCCCAGCCCCCGGCCGCGGCC < 41bp 0.616895273618196 0.841568469111491 0.48726714 0.82795095 prediction 0.449346390986589 Functional Gain - RNF139 ENSG00000170881 UTR5 Human protein_coding chr8:125487271 chr8:125487275 . . 0 25 hm5C_associated_SNPs_117559 0 0 4 DDX3X POSTAR2 ENCODE chr8:125487262-125487324
64251 chr12 69968151 69968151 1 + C T SKCM 69968150 + 69968130 69968170 41 AATATAAATGGGCTATCTATCCCTAGTGCCTCAGGGGTCAG AATATAAATGGGCTATCTATCTCTAGTGCCTCAGGGGTCAG < 41bp 0.469360232053501 0.724663958303202 0.07617912 0.79330003 prediction 0.449327916606403 Functional Gain - FRS2 ENSG00000166225 CDS Human protein_coding chr12:69968150 chr12:69968151 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_117563 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:69968127-69968155
64251 chr3 40351458 40351458 1 + C A UCEC 40351454 + 40351434 40351474 41 TGTCCACTATCCAGAACCTCCAATCTTTCGGTAAGATCCCG TGTCCACTATCCAGAACCTCCAATATTTCGGTAAGATCCCG < 41bp 0.334444014867283 0.724659613902983 0.056220204 0.16551584 prediction 0.449319227805966 Functional Gain - EIF1B ENSG00000114784 CDS Human protein_coding chr3:40351454 chr3:40351458 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_117567 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr3:40351435-40351463
64251 chr19 11548906 11548906 1 + A G LIHC 11548903 + 11548883 11548923 41 CACAGACTGCTGCGATGGAACAGACGAGTACAACAGCGGCG CACAGACTGCTGCGATGGAACAGGCGAGTACAACAGCGGCG < 41bp 0.472388916671264 0.724653533608048 0.32586405 0.7625903 prediction 0.449307067216095 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11548903 chr19:11548906 nonsynonymous SNV 0.984 4 24 hm5C_associated_SNPs_117569 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:11548896-11548924
64251 chr4 1348913 1348913 1 + C T SKCM 1348912 + 1348892 1348932 41 CCCCGTTTCGCAGCGCTTCACCCGCGTCGGGACCCACGGTG CCCCGTTTCGCAGCGCTTCACTCGCGTCGGGACCCACGGTG < 41bp 0.471643806975653 0.724650258309649 0.24949831 0.38897562 prediction 0.449300516619298 Functional Gain - UVSSA ENSG00000163945 CDS Human protein_coding chr4:1348912 chr4:1348913 synonymous SNV . 0 22 hm5C_associated_SNPs_117573 0 0 3 GRWD1 POSTAR2 ENCODE chr4:1348903-1348969
64251 chr1 43260179 43260179 1 + T C rs375220738 43260176 + 43260156 43260196 41 CCAAAGGCAACAGGTTCATCCTCTGCTGCATGGCCTCACTC CCAAAGGCAACAGGTTCATCCTCCGCTGCATGGCCTCACTC < 41bp 0.507566187141227 0.732215850969977 0.1273152 0.04666522 prediction 0.449299327657499 Functional Gain - TMEM269 ENSG00000164008 CDS Human protein_coding chr1:43260176 chr1:43260179 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_117574 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:43260175-43260200
64251 chr16 3536023 3536023 1 + C A rs138141507 3536022 + 3536002 3536042 41 CCTGCTGAGGACAGGCATCGCCGAGACTCCTTGGGTCCTCC CCTGCTGAGGACAGGCATCGCAGAGACTCCTTGGGTCCTCC < 41bp 0.582088786529688 0.806733961013866 0.6982875 0.887483 prediction 0.449290348968356 Functional Gain - NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3536022 chr16:3536023 . . 0 22 hm5C_associated_SNPs_117576 0 0 1 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr16:3536011-3536032
64251 chr16 129665 129665 1 + C T UCEC 129664 + 129644 129684 41 GGTTGGAGTTCTTCGACCAGCCGGCAGTCCCCCTGGCCCGG GGTTGGAGTTCTTCGACCAGCTGGCAGTCCCCCTGGCCCGG < 41bp 0.530925829329678 0.755570462753254 0.7839974 0.39456618 prediction 0.449289266847152 Functional Gain - MPG ENSG00000103152 CDS Human protein_coding chr16:129664 chr16:129665 nonsynonymous SNV 0.184 4 22 hm5C_associated_SNPs_117577 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:129655-129701
64251 chr12 3129844 3129844 1 + C T LUAD 3129843 + 3129823 3129863 41 GCCCCATCGCCCTCTGCGCCCCCGGCACCCCCATGGCAGGG GCCCCATCGCCCTCTGCGCCCTCGGCACCCCCATGGCAGGG < 41bp 0.577959606919724 0.802589630589584 0.3124628 0.21800372 prediction 0.449260047339721 Functional Gain - TEAD4 ENSG00000197905 CDS Human protein_coding chr12:3129843 chr12:3129844 nonsynonymous SNV 0.034 0 22 hm5C_associated_SNPs_117580 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:3129836-3129876
64251 chr1 110581370 110581370 1 + C A SARC 110581369 + 110581349 110581389 41 AAATGCTTTGAGGAGGACTTCCGGATCCATGGTGAGATGAT AAATGCTTTGAGGAGGACTTCAGGATCCATGGTGAGATGAT < 41bp 0.532618851256768 0.757242735987374 0.8763317 0.8661196 prediction 0.449247769461212 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110581369 chr1:110581370 synonymous SNV . 0 22 hm5C_associated_SNPs_117581 0 0 5 BUD13 POSTAR2 ENCODE chr1:110581345-110581390
64251 chr2 74783473 74783473 1 + A G UCEC 74783470 + 74783450 74783490 41 GAGGCCGGCCGCCGCTGCCCCTCAGGCCCTGGAACCTTCAC GAGGCCGGCCGCCGCTGCCCCTCGGGCCCTGGAACCTTCAC < 41bp 0.561183259837274 0.785805965859963 0.078891665 0.18413225 prediction 0.449245412045379 Functional Gain - DOK1 ENSG00000115325 CDS Human protein_coding chr2:74783470 chr2:74783473 nonsynonymous SNV 0.963 1 24 hm5C_associated_SNPs_117582 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:74783450-74783510
64251 chr17 46136757 46136757 1 + T C UCEC 46136755 + 46136735 46136775 41 GTGATGTGGAGGACCTGCAGCGTGACAAAGCCCGGCTGCTG GTGATGTGGAGGACCTGCAGCGCGACAAAGCCCGGCTGCTG < 41bp 0.609975768477794 0.834589281458307 0.33539784 0.4077856 prediction 0.449227025961026 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46136755 chr17:46136757 synonymous SNV . 0 23 hm5C_associated_SNPs_117588 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46136691-46136760
64251 chr8 418863 418863 1 + T C rs78628558 418861 + 418841 418881 41 CCTGCTGTCTGTGCAGGGCTCATAGTGAGTGTTCTGTGAGG CCTGCTGTCTGTGCAGGGCTCACAGTGAGTGTTCTGTGAGG < 41bp 0.533917441504217 0.758517179444381 0.2052485 0.26788032 prediction 0.449199475880329 Functional Gain - FBXO25 ENSG00000147364 UTR3 Human protein_coding chr8:418861 chr8:418863 . . 0 23 hm5C_associated_SNPs_117596 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:418832-418865
64251 chr10 75552346 75552346 1 + A G SKCM 75552343 + 75552323 75552363 41 TCGGAAGGGCCTGAGCCTCCCACAGCCTCTGTTGGCCCCCC TCGGAAGGGCCTGAGCCTCCCACGGCCTCTGTTGGCCCCCC < 41bp 0.565178816932627 0.789772281452256 0.1659522 0.5315226 prediction 0.449186929039258 Functional Gain - ZSWIM8 ENSG00000214655;ENSG00000214655 exonic;splicing Human other chr10:75552343 chr10:75552346 synonymous SNV 0.197 0 24 hm5C_associated_SNPs_117599 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:75552340-75552360
64251 chr2 242105809 242105809 1 + T C OV 242105806 + 242105786 242105826 41 ACCTGGTGAACCTGCGGGAGCTGTACCTTAGCCACAATGGC ACCTGGTGAACCTGCGGGAGCTGCACCTTAGCCACAATGGC < 41bp 0.501476037094378 0.726062755901965 0.30597997 0.2177284 prediction 0.449173437615174 Functional Gain - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242105806 chr2:242105809 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_117602 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:242105788-242105819
64251 chr3 122880297 122880297 1 + C T UCEC 122880296 + 122880276 122880316 41 GCAGAAAAGTATGACAGCGACCGCACAGTAAGTGGGGGAGA GCAGAAAAGTATGACAGCGACTGCACAGTAAGTGGGGGAGA < 41bp 0.582084214905903 0.80666822534599 0.13431188 0.32806003 prediction 0.449168020880174 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122880296 chr3:122880297 nonsynonymous SNV 0.475 4 22 hm5C_associated_SNPs_117604 0 0 1 YBX3 POSTAR2 ENCODE chr3:122880256-122880301
64251 chr15 41641345 41641345 1 + T A UCEC 41641341 + 41641321 41641361 41 CTTGTGATGAGACTGAGATACAGATCAGCAACCAGGAAGAA CTTGTGATGAGACTGAGATACAGAACAGCAACCAGGAAGAA < 41bp 0.427514208637158 0.724579092477481 0.2521865 0.19799307 prediction 0.449158184954961 Functional Gain - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41641341 chr15:41641345 nonsynonymous SNV 0.220 0 25 hm5C_associated_SNPs_117608 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:41641343-41641370
64251 chr5 147491381 147491381 1 + T C STAD 147491378 + 147491358 147491398 41 GTGAGGAATGGACGACTCCCCTGTACCAGAGAGAATGATCC GTGAGGAATGGACGACTCCCCTGCACCAGAGAGAATGATCC < 41bp 0.49798260151266 0.724577983585466 0.079334974 0.22184125 prediction 0.449155967170932 Functional Gain - SPINK5 ENSG00000133710 CDS Human protein_coding chr5:147491378 chr5:147491381 synonymous SNV . 0 24 hm5C_associated_SNPs_117611 0 0 1 UPF1 POSTAR2 GSE47976,GSM1163975 chr5:147491381-147491382
64251 chr2 101591276 101591276 1 + A G rs116596342 101591273 + 101591253 101591293 41 TGTGTGTTTCAGGACAAGGGCTCAAGCCTGGAACCTCGGCA TGTGTGTTTCAGGACAAGGGCTCGAGCCTGGAACCTCGGCA < 41bp 0.479162692164516 0.72457187344693 0.15548256 0.28342158 prediction 0.44914374689386 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101591273 chr2:101591276 synonymous SNV . 0 24 hm5C_associated_SNPs_117614 0 0 1 GRWD1 POSTAR2 ENCODE chr2:101591274-101591328
64251 chr7 23347497 23347497 1 + T C BLCA 23347495 + 23347475 23347515 41 GGCTTTTTGCAGTACAAACACCTGAAATGTAAACGTGACCC GGCTTTTTGCAGTACAAACACCCGAAATGTAAACGTGACCC < 41bp 0.450867630003485 0.724565493093014 0.08535546 0.05691749 prediction 0.449130986186029 Functional Gain - MALSU1 ENSG00000156928 CDS Human protein_coding chr7:23347495 chr7:23347497 nonsynonymous SNV 0.986 3 23 hm5C_associated_SNPs_117618 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:23347491-23347517
64251 chr17 4836753 4836753 1 - A C rs200885748 4836755 - 4836735 4836775 41 ATATAGGTCTGTGTCACCTTCATCACCAAGGGTGGGGCACC ATATAGGTCTGTGTCACCTTCAGCACCAAGGGTGGGGCACC < 41bp 0.383254629100118 0.724562820929536 0.07314423 0.41227382 prediction 0.449125641859073 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4836755 chr17:4836753 nonsynonymous SNV 0.020 1 23 hm5C_associated_SNPs_117619 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:4836737-4836775
64251 chr19 1207178 1207178 1 + C G UCEC 1207177 + 1207157 1207197 41 AGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTG AGAAGAAGTTGCGAAGGATCCGCAACGGGGAGGCCAACGTG < 41bp 0.416382317565801 0.72456194729512 0.112225235 0.086868554 prediction 0.44912389459024 Functional Gain - STK11 ENSG00000118046 CDS Human protein_coding chr19:1207177 chr19:1207178 nonsynonymous SNV 0.994 5 22 hm5C_associated_SNPs_117620 0 0 5 SRSF1 POSTAR2 ENCODE chr19:1207061-1207204
64251 chr10 101122095 101122095 1 + C T COAD 101122094 + 101122074 101122114 41 ATGAGAAGAACAAGAAGGCCCCGGAACACTACCTCTACCAG ATGAGAAGAACAAGAAGGCCCTGGAACACTACCTCTACCAG < 41bp 0.5803193713926 0.804881237949079 0.6338061 0.34717748 prediction 0.449123733112958 Functional Gain - CNNM1 ENSG00000119946 CDS Human protein_coding chr10:101122094 chr10:101122095 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_117621 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr10:101122070-101122101
64251 chr11 63971066 63971066 1 + A G BLCA 63971063 + 63971043 63971083 41 CCATGCGCCTTATCCTGGAACAGATGCAGAAGGACCCCCAG CCATGCGCCTTATCCTGGAACAGGTGCAGAAGGACCCCCAG < 41bp 0.553933329399677 0.778491747018984 0.86758196 0.87975335 prediction 0.449116835238614 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63971063 chr11:63971066 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_117624 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63971032-63971091
64251 chr10 45499229 45499229 1 + C T BRCA 45499228 + 45499208 45499248 41 GAATTCATACTGGAGAAAAACCCTATCAGTGTGATGAGTGT GAATTCATACTGGAGAAAAACTCTATCAGTGTGATGAGTGT < 41bp 0.464017786963808 0.724557607521947 0.078404546 0.9089245 prediction 0.449115215043895 Functional Gain - ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45499228 chr10:45499229 nonsynonymous SNV 0.602 3 22 hm5C_associated_SNPs_117625 0 0 3 DDX6 POSTAR2 ENCODE chr10:45499221-45499316
64251 chr3 167508323 167508323 1 + T C LGG 167508321 + 167508301 167508341 41 ATTTTAATGCAGCAGTAAATCATGTGGACTTCAGTCAAAAT ATTTTAATGCAGCAGTAAATCACGTGGACTTCAGTCAAAAT < 41bp 0.447963197257834 0.724544544654339 0.28683585 0.3560636 prediction 0.449089089308677 Functional Gain - SERPINI1 ENSG00000163536 CDS Human protein_coding chr3:167508321 chr3:167508323 synonymous SNV . 0 23 hm5C_associated_SNPs_117629 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr3:167508320-167508340
64251 chr1 40879859 40879859 1 + C A SKCM 40879855 + 40879835 40879875 41 AGAAAAAAGAAGACCCACAGCTACCTCGGAAAAGCTCCCCG AGAAAAAAGAAGACCCACAGCTACATCGGAAAAGCTCCCCG < 41bp 0.282558526045522 0.724526600065137 0.13802901 0.19200236 prediction 0.449053200130273 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40879855 chr1:40879859 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_117633 0 0 1 U2AF2 POSTAR2 ENCODE chr1:40879819-40879880
64251 chr8 96166798 96166798 1 + C T LUAD 96166797 + 96166777 96166817 41 GTTAATCGTCGCCACCATTGCCGCAAATGTGGTTTTGTTGT GTTAATCGTCGCCACCATTGCTGCAAATGTGGTTTTGTTGT < 41bp 0.568314708706382 0.792838744797496 0.44205904 0.2675249 prediction 0.449048072182228 Functional Gain - PLEKHF2 ENSG00000175895 CDS Human protein_coding chr8:96166797 chr8:96166798 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_117635 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr8:96166779-96166830
64251 chr3 52825555 52825555 1 + T G CESC 52825552 + 52825532 52825572 41 GGGCAATTTTTCCACCCCATCGGTTTTGAAGTGTCTGACAT GGGCAATTTTTCCACCCCATCGGGTTTGAAGTGTCTGACAT < 41bp 0.321213831757887 0.724510440755367 0.06520128 0.774318 prediction 0.449020881510734 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52825552 chr3:52825555 synonymous SNV . 0 24 hm5C_associated_SNPs_117637 0 0 1 PPIG POSTAR2 ENCODE chr3:52825555-52825647
64251 chr17 38249565 38249565 1 + A G HNSC 38249562 + 38249542 38249582 41 GGAAGACGACAGCAGTGAGGCGGACTCCCCGAGCTCCTCTG GGAAGACGACAGCAGTGAGGCGGGCTCCCCGAGCTCCTCTG < 41bp 0.571851635054566 0.796356798109042 0.56159544 0.8859069 prediction 0.449010326108952 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38249562 chr17:38249565 nonsynonymous SNV 0.972 1 24 hm5C_associated_SNPs_117640 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:38249554-38249594
64251 chr5 137734049 137734049 1 + A G LUSC 137734046 + 137734026 137734066 41 GTTCTGCCAGCTCGTAATGTCTGAGAAGGAGGCCATGATGA GTTCTGCCAGCTCGTAATGTCTGGGAAGGAGGCCATGATGA < 41bp 0.560406077018482 0.784909697917592 0.22158667 0.43433756 prediction 0.449007241798221 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137734046 chr5:137734049 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_117643 0 0 1 FXR2 POSTAR2 ENCODE chr5:137734033-137734082
64251 chr13 48615171 48615171 1 + T G COAD 48615168 + 48615148 48615188 41 TCATTGAGAAGGAGAATTACCATTATGTTACTATATTAATG TCATTGAGAAGGAGAATTACCATGATGTTACTATATTAATG < 41bp 0.351086131253386 0.724492515215983 0.03746292 0.12241772 prediction 0.448985030431965 Functional Gain - NUDT15 ENSG00000136159 CDS Human protein_coding chr13:48615168 chr13:48615171 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_117647 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:48615136-48615223
64251 chr10 3162215 3162215 1 + C G rs12572717 3162214 + 3162194 3162234 41 TTTCAGCATCGGGGCAGACACCGCCCTGAACACTATCACCG TTTCAGCATCGGGGCAGACACGGCCCTGAACACTATCACCG < 41bp 0.400091948729483 0.724484861672117 0.1951901 0.6946865 prediction 0.448969723344234 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3162214 chr10:3162215 synonymous SNV . 0 22 hm5C_associated_SNPs_117651 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917662 chr10:3162194-3162216
64251 chr17 78195416 78195416 1 + C T SKCM 78195415 + 78195395 78195435 41 GTCCTCTGGCCCCGGGATGGCCCCGAGCGCCTGCTGCTGCT GTCCTCTGGCCCCGGGATGGCTCCGAGCGCCTGCTGCTGCT < 41bp 0.568709989624884 0.793186403376523 0.42522192 0.5631813 prediction 0.448952827503279 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78195415 chr17:78195416 synonymous SNV . 0 22 hm5C_associated_SNPs_117654 0 0 1 PPIG POSTAR2 ENCODE chr17:78195403-78195478
64251 chr17 78977916 78977916 1 + C A rs530885813 78977912 + 78977892 78977932 41 CCCCACCCGGGAGTGGGGCTCGCACCCCCCCAACCTCGGGT CCCCACCCGGGAGTGGGGCTCGCAACCCCCCAACCTCGGGT < 41bp 0.360448468603635 0.724474841896648 0.3015756 0.3962974 prediction 0.448949683793297 Functional Gain - CHMP6;BAIAP2-AS1 ENSG00000175911 UTR5 Human other chr17:78977912 chr17:78977916 . . 0 25 hm5C_associated_SNPs_117657 0 0 1 XRN2 POSTAR2 ENCODE chr17:78977845-78977916
64251 chr19 3381984 3381984 1 + C T ESCA 3381983 + 3381963 3382003 41 GCATCACCGGCAAGAAGGCGCCGGGCTGCGTGCTCTCCAAC GCATCACCGGCAAGAAGGCGCTGGGCTGCGTGCTCTCCAAC < 41bp 0.528578937292218 0.753051691558068 0.9061773 0.8449751 prediction 0.4489455085317 Functional Gain - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381983 chr19:3381984 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_117659 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:3381950-3381985
64251 chr2 235951358 235951358 1 + C T OV 235951357 + 235951337 235951377 41 ACTACAAAGTACCCGACTTTCCAGGACCGCCCGGTGTCCAG ACTACAAAGTACCCGACTTTCTAGGACCGCCCGGTGTCCAG < 41bp 0.567175166852404 0.79164729535474 0.28456283 0.17931607 prediction 0.448944257004672 Functional Gain - SH3BP4 ENSG00000130147 CDS Human protein_coding chr2:235951357 chr2:235951358 stopgain 0.981 1 22 hm5C_associated_SNPs_117660 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:235951331-235951364
64251 chrX 102471255 102471255 1 + T C LUSC 102471253 + 102471233 102471273 41 GGCGGGGGCGAGTTAGGCGACTTGTCCCTAATTTTCGATGG GGCGGGGGCGAGTTAGGCGACTCGTCCCTAATTTTCGATGG < 41bp 0.56741247176431 0.79188329178754 0.046775132 0.031094998 prediction 0.44894164004646 Functional Gain - BEX4 ENSG00000102409 CDS Human protein_coding chrX:102471253 chrX:102471255 synonymous SNV . 0 23 hm5C_associated_SNPs_117662 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:102471231-102471261
64251 chr1 150318559 150318559 1 + T C STAD 150318557 + 150318537 150318577 41 GCCAATGCTGGGCAACTGTACCTGACAGGGGTGGTGGTACT GCCAATGCTGGGCAACTGTACCCGACAGGGGTGGTGGTACT < 41bp 0.426862619408122 0.724466510090484 0.15781826 0.0996871 prediction 0.448933020180968 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150318557 chr1:150318559 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_117663 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:150318495-150318575
64251 chr7 99751594 99751594 1 + C G rs111773951 99751590 + 99751570 99751610 41 GAGCCCATTGATGTCTGAGCCTGCCGGAGGGCGAGGGTCGG GAGCCCATTGATGTCTGAGCCTGCGGGAGGGCGAGGGTCGG < 41bp 0.627533801721297 0.851998186152763 0.3852699 0.78760016 prediction 0.448928768862932 Functional Gain - LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751590 chr7:99751594 . . 0 25 hm5C_associated_SNPs_117664 0 0 26 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:99751560-99751598
64251 chr2 242265433 242265433 1 + C T SKCM 242265432 + 242265412 242265452 41 AGCCAACTCAGTTTATAAATCCAGAAACACCTGGCTATGTT AGCCAACTCAGTTTATAAATCTAGAAACACCTGGCTATGTT < 41bp 0.467248898117409 0.724460968169541 0.3054345 0.35876015 prediction 0.448921936339081 Functional Gain - SEPT2 ENSG00000168385 CDS Human protein_coding chr2:242265432 chr2:242265433 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_117666 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:242265400-242265460
64251 chr11 47183130 47183130 1 + C T UCEC 47183129 + 47183109 47183149 41 TGGAGACCTCTCCATCATTCCCGAAAAGTGGATGGAGAGAG TGGAGACCTCTCCATCATTCCTGAAAAGTGGATGGAGAGAG < 41bp 0.558121830301448 0.78258053471144 0.1025275 0.038250804 prediction 0.448917408819985 Functional Gain - C11orf49 ENSG00000149179 CDS Human protein_coding chr11:47183129 chr11:47183130 stopgain 0.996 1 22 hm5C_associated_SNPs_117668 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:47183072-47183131
64251 chr11 43923096 43923096 1 + C T rs2271815 43923095 + 43923075 43923115 41 GTGCTGCGCACACTAAAGAACCGCATTGAAGAGAACACTGG GTGCTGCGCACACTAAAGAACTGCATTGAAGAGAACACTGG < 41bp 0.584599334133259 0.809053795854827 0.023096949 0.06382054 prediction 0.448908923443136 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43923095 chr11:43923096 nonsynonymous SNV 0.714 2 22 hm5C_associated_SNPs_117670 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:43923086-43923099
64251 chr11 34938280 34938280 1 + A G LUSC 34938277 + 34938257 34938297 41 GGCTTCCCCGGCCGCCGAAGCGTAGGGCTGGTGAAGGGGGC GGCTTCCCCGGCCGCCGAAGCGTGGGGCTGGTGAAGGGGGC < 41bp 0.572914980320443 0.79736921848269 0.8101293 0.9074571 prediction 0.448908476324494 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34938277 chr11:34938280 synonymous SNV . 0 24 hm5C_associated_SNPs_117671 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr11:34938274-34938310
64251 chr8 128751004 128751004 1 + C A MESO 128751000 + 128750980 128751020 41 GACAGCGGCAGCCCGAACCCCGCCCGCGGCCACAGCGTCTG GACAGCGGCAGCCCGAACCCCGCCAGCGGCCACAGCGTCTG < 41bp 0.720968919253845 0.945415440764028 0.12199265 0.27947894 prediction 0.448893043020365 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128751000 chr8:128751004 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_117674 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:128751004-128751005
64251 chr3 52831908 52831908 1 + C A UCEC 52831907 + 52831887 52831927 41 TCTTTCATCACCAACGACCTCCTGGGAAGCGCCCTCACCAA TCTTTCATCACCAACGACCTCATGGGAAGCGCCCTCACCAA < 41bp 0.452425214683758 0.724445333548698 0.60495985 0.46257293 prediction 0.448890667097396 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52831907 chr3:52831908 nonsynonymous SNV 0.939 1 22 hm5C_associated_SNPs_117675 0 0 3 BUD13 POSTAR2 ENCODE chr3:52831889-52831947
64251 chr15 67813738 67813738 1 + T C rs531995504 67813736 + 67813716 67813756 41 CGCCTGCCGCACTGGACCTCCTTCTGCGTGCCCTACAGCGC CGCCTGCCGCACTGGACCTCCTCCTGCGTGCCCTACAGCGC < 41bp 0.463774823706373 0.724441283903648 0.25425324 0.052253783 prediction 0.448882567807295 Functional Gain - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67813736 chr15:67813738 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_117677 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:67813700-67813760
64251 chrX 129150006 129150006 1 + C T UCEC 129150005 + 129149985 129150025 41 AGCTGAAGTTCGGGCTAAGGCCGGGCAGGCTCGAGTGAAAC AGCTGAAGTTCGGGCTAAGGCTGGGCAGGCTCGAGTGAAAC < 41bp 0.517446491030639 0.741887670818832 0.6225167 0.33737034 prediction 0.448882359576386 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129150005 chrX:129150006 synonymous SNV . 0 22 hm5C_associated_SNPs_117678 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chrX:129149992-129150013
64251 chr11 68704028 68704028 1 + C A rs2236654 68704027 + 68704007 68704047 41 GCAGCACCTGCCAGACAGGGCCGGAAGAAGCCGGCTGGGAA GCAGCACCTGCCAGACAGGGCAGGAAGAAGCCGGCTGGGAA < 41bp 0.604247340706443 0.828687766971532 0.5838631 0.5117785 prediction 0.448880852530176 Functional Gain - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68704027 chr11:68704028 synonymous SNV . 0 22 hm5C_associated_SNPs_117679 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68704026-68704057
64251 chr4 146461073 146461073 1 + C T SKCM 146461072 + 146461052 146461092 41 TGCCACTCAACGCCACTTTTCCAGATTCTTTCCAGCAACCC TGCCACTCAACGCCACTTTTCTAGATTCTTTCCAGCAACCC < 41bp 0.599359010605345 0.823792240907964 0.92737174 0.41397887 prediction 0.448866460605239 Functional Gain - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146461072 chr4:146461073 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_117682 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:146461051-146461075
64251 chr5 134086541 134086541 1 + T C rs140136100 134086538 + 134086518 134086558 41 ATAAATCGATCAATGGATACCTATAGCAAAATGGGCGAAGT ATAAATCGATCAATGGATACCTACAGCAAAATGGGCGAAGT < 41bp 0.501482987814598 0.725914722106946 0.13828182 0.67974484 prediction 0.448863468584696 Functional Gain - CAMLG ENSG00000164615 CDS Human protein_coding chr5:134086538 chr5:134086541 synonymous SNV . 0 24 hm5C_associated_SNPs_117684 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:134086462-134086566
64251 chr1 40758188 40758188 1 + T C UCEC 40758186 + 40758166 40758206 41 CTGATGCATTTGCCAAGAAACTTGGGAAGGCTAAAGACTTA CTGATGCATTTGCCAAGAAACTCGGGAAGGCTAAAGACTTA < 41bp 0.604580432962978 0.828993345298105 0.31260502 0.13594073 prediction 0.448825824670254 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40758186 chr1:40758188 synonymous SNV . 0 23 hm5C_associated_SNPs_117690 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:40758174-40758228
64251 chr16 29857518 29857518 1 + C T rs139422591 29857517 + 29857497 29857537 41 CGGGACTGCCAAGGCGGAGGCCGAGTCCCGTGCGGAGGCAG CGGGACTGCCAAGGCGGAGGCTGAGTCCCGTGCGGAGGCAG < 41bp 0.482979344820492 0.724410135008719 0.8229668 0.8753733 prediction 0.448820270017437 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29857517 chr16:29857518 synonymous SNV . 0 22 hm5C_associated_SNPs_117694 0 0 1 RPS3 POSTAR2 ENCODE chr16:29857478-29857541
64251 chr11 12278391 12278391 1 + T C UCEC 12278388 + 12278368 12278408 41 GGCAGCGACACGTGTTACTTCTGTAAGAAACGTGTGTACGT GGCAGCGACACGTGTTACTTCTGCAAGAAACGTGTGTACGT < 41bp 0.524044288131607 0.748454072415243 0.38420457 0.3592111 prediction 0.448819568567272 Functional Gain - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12278388 chr11:12278391 synonymous SNV . 0 24 hm5C_associated_SNPs_117695 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:12278366-12278413
64251 chr7 148895513 148895513 1 + T C UCEC 148895511 + 148895491 148895531 41 GCACCTGTCTTCCCCGACCGCATGATGCGAGAGCCCCAGTT GCACCTGTCTTCCCCGACCGCACGATGCGAGAGCCCCAGTT < 41bp 0.609087453394399 0.833496535508869 0.3858143 0.286767 prediction 0.448818164228939 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148895511 chr7:148895513 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_117696 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:148895486-148895514
64251 chr17 40847736 40847736 1 + C G ESCA 40847735 + 40847715 40847755 41 TACCGCCTGCCCGACTACCCCCGGCCTGGTCGGCCTGTGCC TACCGCCTGCCCGACTACCCCGGGCCTGGTCGGCCTGTGCC < 41bp 0.397844442881909 0.724399453425475 0.41535854 0.9131699 prediction 0.448798906850949 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40847735 chr17:40847736 nonsynonymous SNV 0.904 1 22 hm5C_associated_SNPs_117700 0 0 2 SND1 POSTAR2 ENCODE chr17:40847671-40847753
64251 chr17 35872792 35872792 1 + T A LUAD 35872788 + 35872768 35872808 41 GTGTGCCTGCTGGAGGCGTACAACTGGGTGAAAGCCCGGCG GTGTGCCTGCTGGAGGCGTACAACAGGGTGAAAGCCCGGCG < 41bp 0.666268603237113 0.890658045402728 0.47076753 0.4491027 prediction 0.44877888433123 Functional Gain - DUSP14 ENSG00000161326 CDS Human other chr17:35872788 chr17:35872792 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_117705 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr17:35872780-35872800
64251 chr11 34988314 34988314 1 + C T COAD 34988313 + 34988293 34988333 41 ACAGCTGGACCATCTTATCCCCGGCCTGTGATCCCACCAGT ACAGCTGGACCATCTTATCCCTGGCCTGTGATCCCACCAGT < 41bp 0.477473164554498 0.724386686135825 0.2570846 0.22133106 prediction 0.44877337227165 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34988313 chr11:34988314 nonsynonymous SNV 0.020 4 22 hm5C_associated_SNPs_117708 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:34988300-34988320
64251 chr13 103504517 103504517 1 + T C rs1047768 103504515 + 103504495 103504535 41 TTAAAGGAGTCCGGGATCGCCATGGGAACTCAATAGAAAAT TTAAAGGAGTCCGGGATCGCCACGGGAACTCAATAGAAAAT < 41bp 0.441039277262148 0.724386027741294 0.9008533 0.8945029 prediction 0.448772055482588 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103504515 chr13:103504517 synonymous SNV . 0 23 hm5C_associated_SNPs_117709 2 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:103504500-103504530
64251 chr1 110883900 110883900 1 + C A COAD 110883899 + 110883879 110883919 41 CGGGATGGTTGGTCCTTGGACCGGGACAGAGGTGATCGAGA CGGGATGGTTGGTCCTTGGACAGGGACAGAGGTGATCGAGA < 41bp 0.588121073502769 0.812504392810285 0.552048 0.68262494 prediction 0.448766638615032 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883899 chr1:110883900 synonymous SNV . 0 22 hm5C_associated_SNPs_117710 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:110883849-110883912
64251 chrX 153678642 153678642 1 + C A LUAD 153678641 + 153678621 153678661 41 GCCGCTGGGAACCCTACGACCCTGAAAAGAAGTGGGACAAG GCCGCTGGGAACCCTACGACCATGAAAAGAAGTGGGACAAG < 41bp 0.584350343274613 0.808733521622792 0.065503985 0.26904556 prediction 0.448766356696357 Functional Gain - FAM50A ENSG00000071859 CDS Human protein_coding chrX:153678641 chrX:153678642 nonsynonymous SNV 0.164 4 22 hm5C_associated_SNPs_117711 0 0 6 DDX55 POSTAR2 ENCODE chrX:153678630-153678668
64251 chr17 27067964 27067964 1 + A G UCEC 27067961 + 27067941 27067981 41 CCCTGGACCAGGAGCCTCTGCTGAGTATAGACCTGGGCACT CCCTGGACCAGGAGCCTCTGCTGGGTATAGACCTGGGCACT < 41bp 0.572279338986685 0.796662234170505 0.8000039 0.91325265 prediction 0.44876579036764 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27067961 chr17:27067964 nonsynonymous SNV 0.932 1 24 hm5C_associated_SNPs_117712 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:27067928-27067965
64251 chr19 47259886 47259886 1 + A G rs145894568 47259883 + 47259863 47259903 41 GTGGTGGATGAGCGCGGCTTCGTATGGGAGAAGGCGGTCGA GTGGTGGATGAGCGCGGCTTCGTGTGGGAGAAGGCGGTCGA < 41bp 0.548190921198322 0.772566676026264 0.20435843 0.3576973 prediction 0.448751509655884 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47259883 chr19:47259886 synonymous SNV . 0 24 hm5C_associated_SNPs_117715 1 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:47259880-47259900
64251 chr12 6575152 6575152 1 - T C ACC 6575155 - 6575135 6575175 41 CCTCCTCAGGTGGTGGACATCATACGTGTGAACGTGGACAA CCTCCTCAGGTGGTGGACATCATGCGTGTGAACGTGGACAA < 41bp 0.490609386602271 0.724363577736452 0.059678644 0.06584096 prediction 0.448727155472905 Functional Gain - VAMP1 ENSG00000139190 CDS Human protein_coding chr12:6575155 chr12:6575152 nonsynonymous SNV 0.991 0 24 hm5C_associated_SNPs_117721 0 0 1 PPIG POSTAR2 ENCODE chr12:6575011-6575159
64251 chr1 9648968 9648968 1 + C A rs554953030 9648964 + 9648944 9648984 41 CCGCCTACCCCCCTGCCGGCCTGCCGTCCTTCCACGCGGAG CCGCCTACCCCCCTGCCGGCCTGCAGTCCTTCCACGCGGAG < 41bp 0.40234240745004 0.724351118608421 0.17125162 0.2068237 prediction 0.448702237216842 Functional Gain - TMEM201 ENSG00000188807 UTR5 Human protein_coding chr1:9648964 chr1:9648968 . . 0 25 hm5C_associated_SNPs_117724 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr1:9648938-9648979
64251 chrX 67943846 67943846 1 + C T CESC 67943845 + 67943825 67943865 41 TTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAG TTGTCTCCCAGTCCCTGGATCTGGAACAACCTGTGCCAGAG < 41bp 0.58453158575989 0.808874157998662 0.72613156 0.6125893 prediction 0.448685144477543 Functional Gain - STARD8 ENSG00000130052 CDS Human protein_coding chrX:67943845 chrX:67943846 nonsynonymous SNV 0.931 1 22 hm5C_associated_SNPs_117727 0 0 1 METAP2 POSTAR2 ENCODE chrX:67943784-67943885
64251 chr8 22262321 22262321 1 + T C rs896378 22262319 + 22262299 22262339 41 CCTGAGGCTCACGCTTCATCCCTGGGTGCACCAGCTATCAG CCTGAGGCTCACGCTTCATCCCCGGGTGCACCAGCTATCAG < 41bp 0.598062033163802 0.8224036774024 0.05865562 0.14083713 prediction 0.448683288477197 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22262319 chr8:22262321 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_117728 0 0 9 RBM47 POSTAR2 GSE58380,GSM1409656 chr8:22262310-22262331
64251 chr2 86344204 86344204 1 + C T SKCM 86344203 + 86344183 86344223 41 ATTTTTACTGGCAAAGAAATCCGGGGAGAATGTGGCCAAGT ATTTTTACTGGCAAAGAAATCTGGGGAGAATGTGGCCAAGT < 41bp 0.503032643906944 0.727365141636653 0.8700568 0.40002066 prediction 0.448664995459418 Functional Gain - PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86344203 chr2:86344204 synonymous SNV . 0 22 hm5C_associated_SNPs_117731 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:86344188-86344249
64251 chr11 45950253 45950253 1 + C T HNSC 45950252 + 45950232 45950272 41 GCTCCAAGCCTGGACATCTCCCGCTTCCGCTCCAGCCCCAC GCTCCAAGCCTGGACATCTCCTGCTTCCGCTCCAGCCCCAC < 41bp 0.556117457142171 0.780435897192552 0.059143245 0.10280338 prediction 0.448636880100761 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45950252 chr11:45950253 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_117738 0 0 1 DDX55 POSTAR2 ENCODE chr11:45950224-45950395
64251 chr10 104679597 104679597 1 + C T UCEC 104679596 + 104679576 104679616 41 GAGGACGTGATGACCCCACTCCGGGACTGCTTCATGATCAC GAGGACGTGATGACCCCACTCTGGGACTGCTTCATGATCAC < 41bp 0.534835257368323 0.759145028141627 0.7166071 0.59188384 prediction 0.448619541546608 Functional Gain - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679596 chr10:104679597 nonsynonymous SNV 0.937 4 22 hm5C_associated_SNPs_117741 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:104679567-104679605
64251 chr15 48063084 48063084 1 + A G STAD 48063081 + 48063061 48063101 41 GTTGGCTGCTCTTCCTACTCCTGAGTCTACACCCGTGCTTC GTTGGCTGCTCTTCCTACTCCTGGGTCTACACCCGTGCTTC < 41bp 0.491220157735396 0.724309272838452 0.2720517 0.5922314 prediction 0.448618545676905 Functional Gain - SEMA6D ENSG00000137872 CDS Human protein_coding chr15:48063081 chr15:48063084 nonsynonymous SNV 0.920 4 24 hm5C_associated_SNPs_117742 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:48063045-48063089
64251 chr9 21854773 21854773 1 + A G rs150135668 21854770 + 21854750 21854790 41 GCGGATGTTATCAACATGACCACAGTTCCAGAGGTGGTTCT GCGGATGTTATCAACATGACCACGGTTCCAGAGGTGGTTCT < 41bp 0.505627316919791 0.729926708531236 0.046664447 0.12105402 prediction 0.448598783222888 Functional Gain - MTAP ENSG00000099810 CDS Human protein_coding chr9:21854770 chr9:21854773 synonymous SNV . 0 24 hm5C_associated_SNPs_117744 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:21854773-21854774
64251 chrX 54951467 54951467 1 + A G CESC 54951464 + 54951444 54951484 41 AGAATATGATGAATATTTCCCAGAAATCATTGAACGAGCAA AGAATATGATGAATATTTCCCAGGAATCATTGAACGAGCAA < 41bp 0.513482592814156 0.737776449054008 0.14857355 0.25821894 prediction 0.448587712479704 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54951464 chrX:54951467 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_117746 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:54951452-54951473
64251 chr2 219447800 219447800 1 + C T COAD 219447799 + 219447779 219447819 41 TGCAATGTGTAGCATCACATCCAGAAACCAGGTAAATGCTT TGCAATGTGTAGCATCACATCTAGAAACCAGGTAAATGCTT < 41bp 0.466391964984462 0.724288535638215 0.16216332 0.67186236 prediction 0.448577071276431 Functional Gain - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219447799 chr2:219447800 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_117749 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:219447761-219447802
64251 chr15 23811962 23811962 1 + C T STAD 23811961 + 23811941 23811981 41 TCCTTCTGTATTAGGTGTATCCGCAGGTGGAGAAGTGCCAG TCCTTCTGTATTAGGTGTATCTGCAGGTGGAGAAGTGCCAG < 41bp 0.534869311591702 0.759151321744633 0.2875498 0.6217587 prediction 0.448564020305861 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811961 chr15:23811962 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117752 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr15:23811949-23811966
64251 chr16 1544556 1544556 1 + C T rs569479774 1544555 + 1544535 1544575 41 GAGCTGTGGGCCAGCTTCTTCCTGGAGGGCCCGGCGGACCA GAGCTGTGGGCCAGCTTCTTCTTGGAGGGCCCGGCGGACCA < 41bp 0.55926481734054 0.783546238811493 0.22229451 0.23279408 prediction 0.448562842941905 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1544555 chr16:1544556 synonymous SNV . 0 22 hm5C_associated_SNPs_117753 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:1544540-1544560
64251 chr1 151236493 151236493 1 + C T UCEC 151236492 + 151236472 151236512 41 ATCACCTTCTGCACGGGCATCCGCGTGGCCCATGTGAGTCC ATCACCTTCTGCACGGGCATCTGCGTGGCCCATGTGAGTCC < 41bp 0.591124251545607 0.815400474020208 0.2138004 0.32127568 prediction 0.448552444949202 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151236492 chr1:151236493 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_117755 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151236462-151236494
64251 chr16 28995757 28995757 1 + C A rs7140 28995756 + 28995736 28995776 41 GTGCCAGCTCCCAGACACTACCTGGGTAGCTCAGGGGAGGA GTGCCAGCTCCCAGACACTACATGGGTAGCTCAGGGGAGGA < 41bp 0.573726063047163 0.798001720578674 0.18592203 0.428484 prediction 0.448551315063022 Functional Gain - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28995756 chr16:28995757 nonsynonymous SNV 0.955 1 22 hm5C_associated_SNPs_117756 0 1 3 DDX55 POSTAR2 ENCODE chr16:28995708-28995789
64251 chr14 32030716 32030716 1 + C A CESC 32030715 + 32030695 32030735 41 CTGGTGGCGGGGCCACTGCCCCGCTTGGGGGAAGCCGAGCG CTGGTGGCGGGGCCACTGCCCAGCTTGGGGGAAGCCGAGCG < 41bp 0.550328576070371 0.774597701077003 0.14334583 0.20824248 prediction 0.448538250013264 Functional Gain - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32030715 chr14:32030716 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_117759 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:32030698-32030738
64251 chr16 29675468 29675468 1 + C T COAD 29675467 + 29675447 29675487 41 GAACCATAACAACGAACTCTCCAGAAACCTCCAGTAGGACC GAACCATAACAACGAACTCTCTAGAAACCTCCAGTAGGACC < 41bp 0.493979865920321 0.724265051372708 0.13894972 0.24159351 prediction 0.448530102745416 Functional Gain - SPN ENSG00000197471 CDS Human protein_coding chr16:29675467 chr16:29675468 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_117761 0 0 1 SND1 POSTAR2 ENCODE chr16:29675409-29675476
64251 chr1 10463156 10463156 1 + T C UCEC 10463154 + 10463134 10463174 41 TTGTTGGATACTGGTGACATCATCATTGACGGAGGAAATTC TTGTTGGATACTGGTGACATCACCATTGACGGAGGAAATTC < 41bp 0.429355365546231 0.724260986741543 0.0291031 0.08508173 prediction 0.448521973483086 Functional Gain - PGD ENSG00000142657 CDS Human protein_coding chr1:10463154 chr1:10463156 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_117764 0 0 28 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:10463108-10463181
64251 chr10 70968472 70968472 1 + A G SKCM 70968469 + 70968449 70968489 41 CACTAAATTGATTAAAATGTCTGAGACGCATAAGCTGTTGA CACTAAATTGATTAAAATGTCTGGGACGCATAAGCTGTTGA < 41bp 0.496162459164238 0.724260494743132 0.20158133 0.2378279 prediction 0.448520989486264 Functional Gain - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70968469 chr10:70968472 nonsynonymous SNV 0.980 2 24 hm5C_associated_SNPs_117766 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:70968452-70968490
64251 chr12 27116299 27116299 1 + A G CESC 27116296 + 27116276 27116316 41 AACTGCAAGCACATGTTGACCAGATAACTGAAATGGCAGCA AACTGCAAGCACATGTTGACCAGGTAACTGAAATGGCAGCA < 41bp 0.503386146236509 0.727644838490013 0.40690166 0.5621532 prediction 0.44851738450701 Functional Gain - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27116296 chr12:27116299 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_117768 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:27116272-27116307
64251 chr16 82101898 82101898 1 + C T UCEC 82101897 + 82101877 82101917 41 AATTGCGAAGAACCTGCTCTCCGCGCCTCTCGGTGCTCCAA AATTGCGAAGAACCTGCTCTCTGCGCCTCTCGGTGCTCCAA < 41bp 0.570149740070039 0.794396929901107 0.4793785 0.24843153 prediction 0.448494379662136 Functional Gain - HSD17B2 ENSG00000086696 CDS Human protein_coding chr16:82101897 chr16:82101898 nonsynonymous SNV 0.009 1 22 hm5C_associated_SNPs_117775 0 0 1 SND1 POSTAR2 ENCODE chr16:82101849-82101916
64251 chr8 21861457 21861457 1 + C A LIHC 21861456 + 21861436 21861476 41 GTATTGTGAACAGCCAGCCACCGGAGAAGCAGCAGGCCATG GTATTGTGAACAGCCAGCCACAGGAGAAGCAGCAGGCCATG < 41bp 0.590228045630358 0.814467812771932 0.52515894 0.7904964 prediction 0.448479534283147 Functional Gain - XPO7 ENSG00000130227 CDS Human protein_coding chr8:21861456 chr8:21861457 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_117778 0 0 11 FMR1 POSTAR2 GSE39682,GSM977615 chr8:21861431-21861458
64251 chr17 9757876 9757876 1 + T G STAD 9757873 + 9757853 9757893 41 CACCGTGGGATACTCCTTCTCTCTTATCTCCCTCTTCCTGG CACCGTGGGATACTCCTTCTCTCGTATCTCCCTCTTCCTGG < 41bp 0.323292054089972 0.724235167212705 0.07105574 0.113363534 prediction 0.448470334425409 Functional Gain - GLP2R ENSG00000065325 CDS Human protein_coding chr17:9757873 chr17:9757876 nonsynonymous SNV 0.724 3 24 hm5C_associated_SNPs_117781 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:9757850-9757909
64251 chr12 69140492 69140492 1 + C G LUSC 69140491 + 69140471 69140511 41 TGGCCAAGGCCATGACCACGCCGGTGATCATAGCCATCCAG TGGCCAAGGCCATGACCACGCGGGTGATCATAGCCATCCAG < 41bp 0.650355950967142 0.874583064336251 0.8291018 0.826699 prediction 0.448454226738219 Functional Gain - SLC35E3 ENSG00000175782 CDS Human protein_coding chr12:69140491 chr12:69140492 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_117787 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:69140467-69140497
64251 chr12 53683909 53683909 1 + C T UCEC 53683908 + 53683888 53683928 41 GGCCCTGGCCACCCTCCAGCCCGGAACCGTGGGCAACACCC GGCCCTGGCCACCCTCCAGCCTGGAACCGTGGGCAACACCC < 41bp 0.590506830090389 0.81473293852097 0.04158625 0.03765592 prediction 0.448452216861163 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53683908 chr12:53683909 synonymous SNV . 0 22 hm5C_associated_SNPs_117788 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr12:53683830-53683913
64251 chr11 61511118 61511118 1 + C T SKCM 61511117 + 61511097 61511137 41 GGAGCTGCTGCTGCTGTCTACCCAGGAGCGGCTGGCGGCGG GGAGCTGCTGCTGCTGTCTACTCAGGAGCGGCTGGCGGCGG < 41bp 0.527819287721049 0.752021471189776 0.27972466 0.30723298 prediction 0.448404366937453 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61511117 chr11:61511118 synonymous SNV . 0 22 hm5C_associated_SNPs_117794 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:61511112-61511140
64251 chr22 40351868 40351868 1 + C A LUAD 40351867 + 40351847 40351887 41 TTTAAGGCGGAGCTTGGGAGCCAGGAAGGATATGTGCCCAA TTTAAGGCGGAGCTTGGGAGCAAGGAAGGATATGTGCCCAA < 41bp 0.475558885963427 0.724197877126226 0.59663624 0.8860805 prediction 0.448395754252452 Functional Gain - GRAP2 ENSG00000100351 CDS Human protein_coding chr22:40351867 chr22:40351868 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_117796 0 0 2 LIN28B POSTAR2 ENCODE chr22:40351824-40351911
64251 chr15 44581138 44581138 1 + C G rs547219242 44581137 + 44581117 44581157 41 TCCCTCGGCCGGCCCTGGGGCCGTGTCCGCCGGGCAACTCC TCCCTCGGCCGGCCCTGGGGCGGTGTCCGCCGGGCAACTCC < 41bp 0.56501497766622 0.789205534828443 0.8547876 0.91149926 prediction 0.448381114324447 Functional Gain - CASC4 ENSG00000166734 UTR5 Human protein_coding chr15:44581137 chr15:44581138 . . 0 22 hm5C_associated_SNPs_117797 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:44581138-44581139
64251 chr6 31584162 31584162 1 + C T LAML 31584161 + 31584141 31584181 41 ATGCTGGAGAAACTTGGAGTCCCCAAGACTCACCTAGAGCT ATGCTGGAGAAACTTGGAGTCTCCAAGACTCACCTAGAGCT < 41bp 0.501496110452638 0.725674751064956 0.09205291 0.95580244 prediction 0.448357281224636 Functional Gain - AIF1 ENSG00000204472 CDS Human protein_coding chr6:31584161 chr6:31584162 nonsynonymous SNV 0.946 4 22 hm5C_associated_SNPs_117798 0 0 1 YBX3 POSTAR2 ENCODE chr6:31584120-31584163
64251 chr17 78923328 78923328 1 + C G PAAD 78923324 + 78923304 78923344 41 GACCGCGTGGCAGGGGCTCTCGGACATGCTGCCAACGACGC GACCGCGTGGCAGGGGCTCTCGGAGATGCTGCCAACGACGC < 41bp 0.437114566617692 0.724175287827229 0.89591 0.9283596 prediction 0.448350575654457 Functional Gain - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78923324 chr17:78923328 nonsynonymous SNV 0.974 3 25 hm5C_associated_SNPs_117801 0 0 1 TBRG4 POSTAR2 ENCODE chr17:78923284-78923350
64251 chr12 56420735 56420735 1 + C T PRAD 56420734 + 56420714 56420754 41 CCTCACTCCCCTGGGGGCATCCGGCTGCCCAATGGCAAGCT CCTCACTCCCCTGGGGGCATCTGGCTGCCCAATGGCAAGCT < 41bp 0.473689427504702 0.724174893272856 0.8830588 0.865008 prediction 0.448349786545713 Functional Gain - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56420734 chr12:56420735 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117802 0 0 1 ZNF622 POSTAR2 ENCODE chr12:56420672-56420760
64251 chr6 27777978 27777978 1 + C A LUAD 27777974 + 27777954 27777994 41 GGTGTCAAGAAGCCCCATCGCTATCGGCCTGGTACAGTGGC GGTGTCAAGAAGCCCCATCGCTATAGGCCTGGTACAGTGGC < 41bp 0.329674149822415 0.724170966068182 0.05767101 0.31670338 prediction 0.448341932136364 Functional Gain - HIST1H3H ENSG00000203813 CDS Human other chr6:27777974 chr6:27777978 synonymous SNV . 0 25 hm5C_associated_SNPs_117805 0 0 39 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:27777835-27778133
64251 chr2 65300044 65300044 1 + C A KIRC 65300043 + 65300023 65300063 41 ACCGGTGGCCATTCTCAGACCCAGATGTTGAAGGGCAGCTT ACCGGTGGCCATTCTCAGACCAAGATGTTGAAGGGCAGCTT < 41bp 0.468214530072299 0.724169950202748 0.36563665 0.24503419 prediction 0.448339900405495 Functional Gain - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65300043 chr2:65300044 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_117807 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:65300013-65300049
64251 chr19 17837090 17837090 1 + C T rs12975100 17837089 + 17837069 17837109 41 CCCTGGCGCCGACAGCCTCCCCGGCCTCAACAGCCTGCTGC CCCTGGCGCCGACAGCCTCCCTGGCCTCAACAGCCTGCTGC < 41bp 0.528044380160907 0.752211587792892 0.20674863 0.09735659 prediction 0.44833441526397 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837089 chr19:17837090 synonymous SNV . 0 22 hm5C_associated_SNPs_117808 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:17837079-17837119
64251 chr10 103898508 103898508 1 + C T UCEC 103898507 + 103898487 103898527 41 TCGGAGCTGCTTGTGTCACCCCGGGAGGGCTCCTCTGTGAG TCGGAGCTGCTTGTGTCACCCTGGGAGGGCTCCTCTGTGAG < 41bp 0.567923456996134 0.792085176963836 0.67238045 0.67463636 prediction 0.448323439935405 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103898507 chr10:103898508 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_117810 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr10:103898484-103898512
64251 chr10 13164441 13164441 1 + A G UCEC 13164438 + 13164418 13164458 41 TTCTGAGATTGAAACCCAGACAGAGGGGAGCACAGAGAAAG TTCTGAGATTGAAACCCAGACAGGGGGGAGCACAGAGAAAG < 41bp 0.540709657064731 0.764859652591472 0.40809807 0.7954086 prediction 0.448299991053483 Functional Gain - OPTN ENSG00000123240 CDS Human protein_coding chr10:13164438 chr10:13164441 nonsynonymous SNV 0.050 2 24 hm5C_associated_SNPs_117817 0 0 2 GRWD1 POSTAR2 ENCODE chr10:13164408-13164480
64251 chr3 9788983 9788983 1 + C A THCA 9788982 + 9788962 9789002 41 TACCACAGGGCTCTGCAGCACCGCAGCAAGGTGCAAGGCGA TACCACAGGGCTCTGCAGCACAGCAGCAAGGTGCAAGGCGA < 41bp 0.47368033560241 0.724144635938355 0.19454563 0.23450923 prediction 0.448289271876711 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9788982 chr3:9788983 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_117818 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:9788955-9788984
64251 chr20 3781980 3781980 1 + A G LIHC 3781977 + 3781957 3781997 41 TCGCTTCTCTCTGACCCCTGCAGAGGGGGATACTGAGGAAG TCGCTTCTCTCTGACCCCTGCAGGGGGGGATACTGAGGAAG < 41bp 0.474502708776224 0.724144230186827 0.38784713 0.9003937 prediction 0.448288460373654 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3781977 chr20:3781980 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_117819 0 0 2 GRWD1 POSTAR2 ENCODE chr20:3781902-3781988
64251 chr15 76633491 76633491 1 + C G rs202074846 76633487 + 76633467 76633507 41 CCCCGCAGAGCCTTCAGGGACTGACTGGGACGCCCCTGGTG CCCCGCAGAGCCTTCAGGGACTGAGTGGGACGCCCCTGGTG < 41bp 0.410194904285055 0.724142595333044 0.16040087 0.34678698 prediction 0.448285190666088 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76633487 chr15:76633491 nonsynonymous SNV 0.961 2 25 hm5C_associated_SNPs_117821 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr15:76633474-76633500
64251 chr11 118869172 118869172 1 + T G LIHC 118869169 + 118869149 118869189 41 GCCCGCAAGGCCATCCGCGCCGCTCAGGTGGAGCGCTATGT GCCCGCAAGGCCATCCGCGCCGCGCAGGTGGAGCGCTATGT < 41bp 0.331261846859965 0.724137097155512 0.03687191 0.1846171 prediction 0.448274194311024 Functional Gain - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118869169 chr11:118869172 synonymous SNV . 0 24 hm5C_associated_SNPs_117823 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118869168-118869206
64251 chr14 31354733 31354733 1 + C T LUAD 31354732 + 31354712 31354752 41 CGAGGAAGCAGGCATTGTGGCCAGAGAGTTTGGTGTCAATG CGAGGAAGCAGGCATTGTGGCTAGAGAGTTTGGTGTCAATG < 41bp 0.466731385139193 0.724136982530121 0.11612031 0.030656993 prediction 0.448273965060242 Functional Gain - COCH ENSG00000100473 CDS Human protein_coding chr14:31354732 chr14:31354733 synonymous SNV . 0 22 hm5C_associated_SNPs_117824 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:31354690-31354740
64251 chr19 19349079 19349079 1 + C T LUAD 19349078 + 19349058 19349098 41 CCAGACACCGAGGGCTGTGACCGCGGCTGGCATAAGTTCCA CCAGACACCGAGGGCTGTGACTGCGGCTGGCATAAGTTCCA < 41bp 0.475058882639382 0.72411823051745 0.57394385 0.3576221 prediction 0.4482364610349 Functional Gain - NCAN ENSG00000130287 CDS Human protein_coding chr19:19349078 chr19:19349079 nonsynonymous SNV 0.726 1 22 hm5C_associated_SNPs_117836 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:19349067-19349090
64251 chr3 30648074 30648074 1 + A G rs138010137 30648071 + 30648051 30648091 41 TTCCTGTTTCCCCCGCAGCGCTGAGTTGAAGTTGAGTGAGT TTCCTGTTTCCCCCGCAGCGCTGGGTTGAAGTTGAGTGAGT < 41bp 0.533916844596025 0.758028619988647 0.3806004 0.8391346 prediction 0.448223550785245 Functional Gain - TGFBR2 ENSG00000163513 UTR5 Human protein_coding chr3:30648071 chr3:30648074 . . 0 24 hm5C_associated_SNPs_117838 3 0 1 DDX3X POSTAR2 ENCODE chr3:30648055-30648081
64251 chr19 36256076 36256076 1 + C T UCEC 36256075 + 36256055 36256095 41 GGGCCTTGGCCCCAGGGCACCCGGTAAGGGCTGAGAGGCAA GGGCCTTGGCCCCAGGGCACCTGGTAAGGGCTGAGAGGCAA < 41bp 0.543264060530702 0.767371859432962 0.22639292 0.43916148 prediction 0.448215597804519 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256075 chr19:36256076 synonymous SNV . 0 22 hm5C_associated_SNPs_117842 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:36256076-36256077
64251 chr11 45203364 45203364 1 + T G UCEC 45203362 + 45203342 45203382 41 TTGGCCCAGACCAATGCAGCCGTGGGGGATATGGTGACGGT TTGGCCCAGACCAATGCAGCCGGGGGGGATATGGTGACGGT < 41bp 0.36774227237486 0.724100549204684 0.7589792 0.9000355 prediction 0.448201098409368 Functional Gain - PRDM11 ENSG00000019485 CDS Human protein_coding chr11:45203362 chr11:45203364 nonsynonymous SNV 0.975 1 23 hm5C_associated_SNPs_117845 0 0 3 BUD13 POSTAR2 ENCODE chr11:45203322-45203446
64251 chr10 5494838 5494838 1 + C T COAD 5494837 + 5494817 5494857 41 TTAGGCAATATATGAAATGTCCCGAGGTGAACAGGATTTAA TTAGGCAATATATGAAATGTCTCGAGGTGAACAGGATTTAA < 41bp 0.592849024550721 0.816931694733489 0.14644107 0.3111467 prediction 0.448165340365537 Functional Gain - NET1 ENSG00000173848 CDS Human protein_coding chr10:5494837 chr10:5494838 synonymous SNV . 0 22 hm5C_associated_SNPs_117849 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr10:5494826-5494850
64251 chr6 42656027 42656027 1 + C T SKCM 42656026 + 42656006 42656046 41 TGCGGATCTCTGCTGTGCTCCCAGAGTTACTGCTGCCAGAC TGCGGATCTCTGCTGTGCTCCTAGAGTTACTGCTGCCAGAC < 41bp 0.580872185174436 0.804939115461521 0.4188715 0.21246767 prediction 0.44813386057417 Functional Gain - UBR2 ENSG00000024048 CDS Human protein_coding chr6:42656026 chr6:42656027 stopgain 1.000 1 22 hm5C_associated_SNPs_117852 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:42655993-42656027
64251 chr2 61244926 61244926 1 + C A rs564528921 61244925 + 61244905 61244945 41 AGCCGCCACCTCCCCCCAAACCCTGGGAGACCCGCCGAATT AGCCGCCACCTCCCCCCAAACACTGGGAGACCCGCCGAATT < 41bp 0.5622947514966 0.786355044234021 0.34128582 0.5363436 prediction 0.448120585474842 Functional Gain - PEX13 ENSG00000162928 CDS Human protein_coding chr2:61244925 chr2:61244926 nonsynonymous SNV 0.941 5 22 hm5C_associated_SNPs_117855 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917666 chr2:61244898-61244934
64251 chr1 44437687 44437687 1 + C A UCEC 44437683 + 44437663 44437703 41 GCTGGAAGCTGCCTGCAACCCTGCCTGGCCACCTCCAGGCC GCTGGAAGCTGCCTGCAACCCTGCATGGCCACCTCCAGGCC < 41bp 0.718855857108373 0.94291559706915 0.03224823 0.13072342 prediction 0.448119479921554 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437683 chr1:44437687 synonymous SNV . 0 25 hm5C_associated_SNPs_117856 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:44437680-44437700
64251 chr20 36488692 36488692 1 + C T UCEC 36488691 + 36488671 36488711 41 TAGATTCGCCAGAGGGTTCACCAGATCCTAAACATGCGAGG TAGATTCGCCAGAGGGTTCACTAGATCCTAAACATGCGAGG < 41bp 0.480314854912588 0.724058351362641 0.844098 0.23656157 prediction 0.448116702725282 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488691 chr20:36488692 stopgain 1.000 1 22 hm5C_associated_SNPs_117858 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:36488671-36488703
64251 chr16 1756442 1756442 1 + C G rs543526477 1756438 + 1756418 1756458 41 GGAGCGGGTGTCGGGCCTGGCGGGCTCCATCTACCGCGAGT GGAGCGGGTGTCGGGCCTGGCGGGGTCCATCTACCGCGAGT < 41bp 0.43161828478672 0.724042907943163 0.8995497 0.9395322 prediction 0.448085815886326 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1756438 chr16:1756442 synonymous SNV . 0 25 hm5C_associated_SNPs_117863 0 0 4 TARDBP POSTAR2 DRA001158,DRS012385 chr16:1756410-1756457
64251 chr9 131891325 131891325 1 + C T SKCM 131891324 + 131891304 131891344 41 GGTGGATTGATGAGACTCCTCCAGTGGACCAGCCCTCTCGG GGTGGATTGATGAGACTCCTCTAGTGGACCAGCCCTCTCGG < 41bp 0.541587097410348 0.765617250258844 0.52733946 0.3786191 prediction 0.448060305696994 Functional Gain - PTPA ENSG00000119383 CDS Human protein_coding chr9:131891324 chr9:131891325 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_117864 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:131891277-131891334
64251 chr14 102904488 102904488 1 + C G TGCT 102904484 + 102904464 102904504 41 TGCAGCGCGTTGCCGGGCGCCGGGCTGCGCTGGCAGAAGTT TGCAGCGCGTTGCCGGGCGCCGGGGTGCGCTGGCAGAAGTT < 41bp 0.420055556506265 0.724027984758041 0.8646839 0.9083888 prediction 0.448055969516081 Functional Gain - TECPR2 ENSG00000196663 CDS Human protein_coding chr14:102904484 chr14:102904488 nonsynonymous SNV 0.981 2 25 hm5C_associated_SNPs_117867 0 0 1 PPIG POSTAR2 ENCODE chr14:102904483-102904548
64251 chr9 137005907 137005907 1 + C T UCEC 137005906 + 137005886 137005926 41 TGTCCTCCGTGAAATTCAGCCCGAATGGAGAGTGGCTGGCA TGTCCTCCGTGAAATTCAGCCTGAATGGAGAGTGGCTGGCA < 41bp 0.456097508136431 0.724027509137207 0.03656292 0.032033563 prediction 0.448055018274414 Functional Gain - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137005906 chr9:137005907 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_117869 0 0 3 PRPF8 POSTAR2 ENCODE chr9:137005903-137005927
64251 chr19 42791796 42791796 1 + C T LGG 42791795 + 42791775 42791815 41 CGTCATCCCAACCAGGACAACCGGACCGTCAGCAAGATCCT CGTCATCCCAACCAGGACAACTGGACCGTCAGCAAGATCCT < 41bp 0.468380324953713 0.724025367493292 0.41470075 0.704706 prediction 0.448050734986585 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42791795 chr19:42791796 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_117870 0 0 2 NOP58 POSTAR2 GSE43666,GSM1067862 chr19:42791776-42791812
64251 chr10 69669071 69669071 1 + A G UCEC 69669068 + 69669048 69669088 41 ACCGCTTGCTATCATGAAACCAGAGATTGTGTTTTTTGGTG ACCGCTTGCTATCATGAAACCAGGGATTGTGTTTTTTGGTG < 41bp 0.537644506995882 0.761647701743884 0.33343506 0.88648736 prediction 0.448006389496004 Functional Gain - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69669068 chr10:69669071 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_117883 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr10:69669055-69669076
64251 chr15 41786075 41786075 1 + C G rs564713061 41786071 + 41786051 41786091 41 CCGGGGGCGCCGAGCCGCTCCAGTCCCCGGCGCGCCGCGGG CCGGGGGCGCCGAGCCGCTCCAGTGCCCGGCGCGCCGCGGG < 41bp 0.601189039945021 0.825190609234941 0.62119645 0.83156675 prediction 0.448003138579841 Functional Gain - ITPKA ENSG00000137825 UTR5 Human protein_coding chr15:41786071 chr15:41786075 . . 0 25 hm5C_associated_SNPs_117885 0 0 4 EFTUD2 POSTAR2 ENCODE chr15:41786045-41786085
64251 chr12 123463643 123463643 1 + T C UCEC 123463641 + 123463621 123463661 41 CATCTGCAGGCACCCACAGCCCTGACGGAGCCCCTGGAGGT CATCTGCAGGCACCCACAGCCCCGACGGAGCCCCTGGAGGT < 41bp 0.566993296083587 0.790994170500856 0.12512302 0.16636693 prediction 0.448001748834539 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463641 chr12:123463643 nonsynonymous SNV 0.032 1 23 hm5C_associated_SNPs_117886 0 0 5 BUD13 POSTAR2 ENCODE chr12:123463612-123463716
64251 chr7 143080292 143080292 1 + A G rs140819301 143080289 + 143080269 143080309 41 AATCAAAAATTGGGGCACCCCGAAGCTCTTTCTGCTGGCAC AATCAAAAATTGGGGCACCCCGAGGCTCTTTCTGCTGGCAC < 41bp 0.577712315391983 0.801712002852744 0.49207208 0.71458566 prediction 0.447999374921523 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143080289 chr7:143080292 synonymous SNV . 0 24 hm5C_associated_SNPs_117888 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr7:143080291-143080321
64251 chr3 142838916 142838916 1 + C A rs72551380 142838915 + 142838895 142838935 41 CCTCCCGGTGATGGAAGCAGCCGCCGCCGCCGCTGCGGGGT CCTCCCGGTGATGGAAGCAGCAGCCGCCGCCGCTGCGGGGT < 41bp 0.541419072846765 0.765415835947289 0.35254124 0.50588465 prediction 0.447993526201048 Functional Gain - CHST2 ENSG00000175040 UTR5 Human protein_coding chr3:142838915 chr3:142838916 . . 0 22 hm5C_associated_SNPs_117889 0 0 6 DDX3X POSTAR2 ENCODE chr3:142838742-142838991
64251 chr19 30099607 30099607 1 + C T UCEC 30099606 + 30099586 30099626 41 TCAGAAAGAGGCGAATGACTCCGATGTCCAGGTCAGTTCTT TCAGAAAGAGGCGAATGACTCTGATGTCCAGGTCAGTTCTT < 41bp 0.515038365002348 0.73903371637068 0.56332827 0.27444065 prediction 0.447990702736664 Functional Gain - POP4 ENSG00000105171 CDS Human protein_coding chr19:30099606 chr19:30099607 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_117890 0 0 2 PRPF8 POSTAR2 ENCODE chr19:30099580-30099651
64251 chr7 148904528 148904528 1 + C T READ 148904527 + 148904507 148904547 41 TGTGTGGGAGCAGCGCCACCCCGAAGAGAGAGAAATCCCAA TGTGTGGGAGCAGCGCCACCCTGAAGAGAGAGAAATCCCAA < 41bp 0.576191552619118 0.800179608005375 0.06063649 0.07666758 prediction 0.447976110772514 Functional Gain - ZNF282 ENSG00000170265 CDS Human protein_coding chr7:148904527 chr7:148904528 synonymous SNV . 0 22 hm5C_associated_SNPs_117893 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:148904506-148904534
64251 chr2 37474631 37474631 1 + A G UCEC 37474628 + 37474608 37474648 41 GACCACAAGCTTCATGATGTCTTAATTGCCCCAGGAACAGC GACCACAAGCTTCATGATGTCTTGATTGCCCCAGGAACAGC < 41bp 0.500685854654546 0.724659777315091 0.04514861 0.09079096 prediction 0.447947845321091 Functional Gain - NDUFAF7 ENSG00000003509 CDS Human protein_coding chr2:37474628 chr2:37474631 synonymous SNV . 0 24 hm5C_associated_SNPs_117895 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:37474631-37474677
64251 chr9 130868020 130868020 1 + C T LUAD 130868019 + 130867999 130868039 41 CCCTCCCAGGTCCATGCCTCCCGCAGCAACAACATGGGCAT CCCTCCCAGGTCCATGCCTCCTGCAGCAACAACATGGGCAT < 41bp 0.598988815579935 0.822952378985696 0.14168882 0.3992057 prediction 0.447927126811522 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868019 chr9:130868020 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_117900 0 0 3 BUD13 POSTAR2 ENCODE chr9:130867970-130868048
64251 chr19 19166203 19166203 1 + C A CESC 19166202 + 19166182 19166222 41 ACCCAGCATCTGACCAGCCCCCAGGTACCCACCTCGGGGGG ACCCAGCATCTGACCAGCCCCAAGGTACCCACCTCGGGGGG < 41bp 0.602946208407869 0.826904403613346 0.24782938 0.4080097 prediction 0.447916390410955 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19166202 chr19:19166203 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_117904 0 0 2 PPIG POSTAR2 ENCODE chr19:19166151-19166206
64251 chr6 37142110 37142110 1 + T G rs72552389 37142108 + 37142088 37142128 41 CATAGATACTCTCTTCTTCTCATAGGTGTCCAGCATTGCTG CATAGATACTCTCTTCTTCTCAGAGGTGTCCAGCATTGCTG < 41bp 0.371381062625049 0.723943280897099 0.5576214 0.92908275 prediction 0.447886561794198 Functional Gain - PIM1 ENSG00000137193 UTR3 Human protein_coding chr6:37142108 chr6:37142110 . . 0 23 hm5C_associated_SNPs_117908 0 0 10 CSTF2 POSTAR2 GSE37401,GSM917676 chr6:37142077-37142115
64251 chr16 28993747 28993747 1 + C T STAD 28993746 + 28993726 28993766 41 CTGGGTGTGGAGATCAGCCGCCGGCTCCGCCACTCCAACCC CTGGGTGTGGAGATCAGCCGCTGGCTCCGCCACTCCAACCC < 41bp 0.543180431413086 0.767121026743678 0.31324536 0.33528364 prediction 0.447881190661184 Functional Gain - SPNS1 ENSG00000169682 CDS Human protein_coding chr16:28993746 chr16:28993747 nonsynonymous SNV 0.977 0 22 hm5C_associated_SNPs_117910 0 0 2 PCBP2 POSTAR2 ENCODE chr16:28993737-28993784
64251 chr2 200820786 200820786 1 + C T SKCM 200820785 + 200820765 200820805 41 CCCGCAGCCTTCGCTTCTTTCCCTGCCTGCCCTCAGCGCAG CCCGCAGCCTTCGCTTCTTTCTCTGCCTGCCCTCAGCGCAG < 41bp 0.540189478079538 0.764124697036533 0.15271363 0.26683527 prediction 0.447870437913989 Functional Gain - MAIP1 ENSG00000162972 CDS Human protein_coding chr2:200820785 chr2:200820786 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_117912 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:200820786-200820787
64251 chr9 139977137 139977137 1 + C G rs142483313 139977136 + 139977116 139977156 41 GAGTTCCAGTCCCCGCTCATCCTGGATGAAGACCAGGCCAG GAGTTCCAGTCCCCGCTCATCGTGGATGAAGACCAGGCCAG < 41bp 0.412617085898435 0.72392941653203 0.43796784 0.89517313 prediction 0.447858833064059 Functional Gain - UAP1L1 ENSG00000197355 CDS Human protein_coding chr9:139977136 chr9:139977137 nonsynonymous SNV 0.957 1 22 hm5C_associated_SNPs_117914 0 0 1 BUD13 POSTAR2 ENCODE chr9:139977081-139977170
64251 chr7 151722833 151722833 1 + T A rs28600855 151722829 + 151722809 151722849 41 GCGGCCGCCACTGCGCCCAGCGCCTGCGCGACGCCTGGCTG GCGGCCGCCACTGCGCCCAGCGCCAGCGCGACGCCTGGCTG < 41bp 0.620986083583159 0.844908381705542 0.7420881 0.8777563 prediction 0.447844596244766 Functional Gain - GALNT11 ENSG00000178234 UTR5 Human protein_coding chr7:151722829 chr7:151722833 . . 0 25 hm5C_associated_SNPs_117920 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr7:151722820-151722840
64251 chr6 52268170 52268170 1 + C T HNSC 52268169 + 52268149 52268189 41 CCGGGAGCCTTACATCCGCACCGGCTACCGCCCCACGGGGC CCGGGAGCCTTACATCCGCACTGGCTACCGCCCCACGGGGC < 41bp 0.496103904516965 0.723918484698314 0.54929215 0.4717762 prediction 0.447836969396628 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268169 chr6:52268170 synonymous SNV . 0 22 hm5C_associated_SNPs_117922 0 0 4 DDX3X POSTAR2 ENCODE chr6:52268140-52268185
64251 chr7 96747179 96747179 1 + C G BLCA 96747175 + 96747155 96747195 41 GAGACATAAGACCGTTGGTTCTGACGAGGCACAGCGTTTCT GAGACATAAGACCGTTGGTTCTGAGGAGGCACAGCGTTTCT < 41bp 0.431690859061291 0.723914522381722 0.10715383 0.14704034 prediction 0.447829044763444 Functional Gain - SDHAF3 ENSG00000196636 CDS Human protein_coding chr7:96747175 chr7:96747179 nonsynonymous SNV 0.948 0 25 hm5C_associated_SNPs_117926 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:96747133-96747181
64251 chr19 35646317 35646317 1 + C A rs112124104 35646313 + 35646293 35646333 41 CCTCCCCTTTCCCCTGAGGCCAGCCGTCAGCCCCTGGCAGG CCTCCCCTTTCCCCTGAGGCCAGCAGTCAGCCCCTGGCAGG < 41bp 0.632545655340959 0.856440745026517 0.19442809 0.28155982 prediction 0.447790179371117 Functional Gain - FXYD5 ENSG00000089327 UTR5 Human protein_coding chr19:35646313 chr19:35646317 . . 0 25 hm5C_associated_SNPs_117935 0 0 2 XRCC6 POSTAR2 ENCODE chr19:35646272-35646327
64251 chr2 120436773 120436773 1 + A G rs2272053 120436770 + 120436750 120436790 41 TTTGCGGCCGCCCTGCCGCGCGCACATGTAGGCGTTCCGAG TTTGCGGCCGCCCTGCCGCGCGCGCATGTAGGCGTTCCGAG < 41bp 0.546161136077234 0.770053414001028 0.13370082 0.43273276 prediction 0.447784555847588 Functional Gain - TMEM177 ENSG00000144120 UTR5 Human protein_coding chr2:120436770 chr2:120436773 . . 0 24 hm5C_associated_SNPs_117936 0 0 5 DDX3X POSTAR2 ENCODE chr2:120436771-120436833
64251 chr3 10311939 10311939 1 + C T rs2075352 10311938 + 10311918 10311958 41 CCCTGAAACCTTCAGCCGTTCCGGAGCCTTCTTCCTTCACC CCCTGAAACCTTCAGCCGTTCTGGAGCCTTCTTCCTTCACC < 41bp 0.575805177638963 0.799692260895523 0.48336947 0.25926656 prediction 0.447774166513119 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10311938 chr3:10311939 nonsynonymous SNV 0.013 1 22 hm5C_associated_SNPs_117937 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:10311888-10311940
64251 chrX 47085738 47085738 1 + C T COAD 47085737 + 47085717 47085757 41 CACCGGCAGAAGGTGCTACACCGAGACCTCAAGCCCCAGAA CACCGGCAGAAGGTGCTACACTGAGACCTCAAGCCCCAGAA < 41bp 0.577497054491641 0.801377006393745 0.29393303 0.2706781 prediction 0.447759903804207 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47085737 chrX:47085738 stopgain 1.000 1 22 hm5C_associated_SNPs_117940 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:47085730-47085765
64251 chr1 16330879 16330879 1 + C A GBM 16330878 + 16330858 16330898 41 GACAGGCCTGGAGACCAGCTCCGGTAAGAGGCGGCAAAGGG GACAGGCCTGGAGACCAGCTCAGGTAAGAGGCGGCAAAGGG < 41bp 0.465533898528082 0.723877995236885 0.25839597 0.40307146 prediction 0.447755990473769 Functional Gain - C1orf64 ENSG00000183888 CDS Human protein_coding chr1:16330878 chr1:16330879 synonymous SNV . 0 22 hm5C_associated_SNPs_117943 0 0 2 DDX3X POSTAR2 ENCODE chr1:16330742-16330881
64251 chr16 722987 722987 1 + C T COAD 722986 + 722966 723006 41 CTCCTCCAAGGCCGACCTGCCCGAAGGTGTCGCGGTGTCTG CTCCTCCAAGGCCGACCTGCCTGAAGGTGTCGCGGTGTCTG < 41bp 0.58214691569965 0.806022093794677 0.31651962 0.2770055 prediction 0.447750356190055 Functional Gain - RHOT2 ENSG00000140983 CDS Human protein_coding chr16:722986 chr16:722987 synonymous SNV . 0 22 hm5C_associated_SNPs_117945 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:722972-723010
64251 chr2 3391544 3391544 1 + C T UCEC 3391543 + 3391523 3391563 41 TGGATCCGAAGAGAACGAGACCGCATCGGAAGGCTCGAGTC TGGATCCGAAGAGAACGAGACTGCATCGGAAGGCTCGAGTC < 41bp 0.463064017844431 0.723870094570353 0.15287733 0.24030223 prediction 0.447740189140707 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3391543 chr2:3391544 synonymous SNV . 0 22 hm5C_associated_SNPs_117949 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:3391502-3391545
64251 chr9 140137531 140137531 1 + C T CESC 140137530 + 140137510 140137550 41 GTACCGGGCGCTGACCGTGCCCGAGCTCACCCAGCAGATGT GTACCGGGCGCTGACCGTGCCTGAGCTCACCCAGCAGATGT < 41bp 0.489287675427012 0.723869889209486 0.09419656 0.07595539 prediction 0.447739778418972 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137530 chr9:140137531 synonymous SNV . 0 22 hm5C_associated_SNPs_117950 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:140137480-140137540
64251 chr11 3405479 3405479 1 + T C UCEC 3405477 + 3405457 3405497 41 ACCAAGGAGCTGCAGCAGTTCGTCGTCAGTGGCAGCCCCAT ACCAAGGAGCTGCAGCAGTTCGCCGTCAGTGGCAGCCCCAT < 41bp 0.555132383787174 0.778989885379166 0.15382782 0.18934032 prediction 0.447715003183984 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3405477 chr11:3405479 . . 0 23 hm5C_associated_SNPs_117954 0 0 3 BUD13 POSTAR2 ENCODE chr11:3405433-3405518
64251 chr2 102476206 102476206 1 + T C UCEC 102476204 + 102476184 102476224 41 TCCTGTCTCTACAGCATGACCATAGGAGGCCGCACCCGCAG TCCTGTCTCTACAGCATGACCACAGGAGGCCGCACCCGCAG < 41bp 0.468675203517409 0.72385537469729 0.5192204 0.45705235 prediction 0.44771074939458 Functional Gain - MAP4K4 ENSG00000071054 CDS Human protein_coding chr2:102476204 chr2:102476206 synonymous SNV . 0 23 hm5C_associated_SNPs_117957 0 0 9 DDX24 POSTAR2 ENCODE chr2:102476195-102476264
64251 chr7 6628267 6628267 1 + C T SKCM 6628266 + 6628246 6628286 41 AGTACCTGTTCCTGACTTTTCCACGGATTGTCTTCATGCTG AGTACCTGTTCCTGACTTTTCTACGGATTGTCTTCATGCTG < 41bp 0.481257168368314 0.723854770508753 0.44243777 0.25487605 prediction 0.447709541017506 Functional Gain - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628266 chr7:6628267 nonsynonymous SNV 0.973 4 22 hm5C_associated_SNPs_117958 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6628245-6628283
64251 chr16 57765092 57765092 1 + C T LIHC 57765091 + 57765071 57765111 41 CTTCAGACACAAGGAACTGGCCCCACTGAAGTACCTGGCTC CTTCAGACACAAGGAACTGGCTCCACTGAAGTACCTGGCTC < 41bp 0.588693730241383 0.812547997243562 0.12908617 0.8830074 prediction 0.447708534004359 Functional Gain - DRC7 ENSG00000159625 CDS Human protein_coding chr16:57765091 chr16:57765092 synonymous SNV . 0 22 hm5C_associated_SNPs_117960 0 0 1 TBRG4 POSTAR2 ENCODE chr16:57765088-57765127
64251 chr12 57850536 57850536 1 + C T SKCM 57850535 + 57850515 57850555 41 TCCTGTTGTGTCCCTACTGCCCGAAGGCCCCTCTCTCTCCT TCCTGTTGTGTCCCTACTGCCTGAAGGCCCCTCTCTCTCCT < 41bp 0.551342206322374 0.775190220340234 0.23259765 0.13155243 prediction 0.44769602803572 Functional Gain - INHBE ENSG00000139269 CDS Human protein_coding chr12:57850535 chr12:57850536 stopgain 0.992 1 22 hm5C_associated_SNPs_117962 0 0 2 PCBP2 POSTAR2 ENCODE chr12:57850494-57850568
64251 chr7 108212273 108212273 1 + A G STAD 108212270 + 108212250 108212290 41 ACTATGATATCTTAGGTGTGCCAAAATCGGCATCAGAGCGC ACTATGATATCTTAGGTGTGCCAGAATCGGCATCAGAGCGC < 41bp 0.513478387230641 0.737323118445924 0.20276427 0.41239184 prediction 0.447689462430566 Functional Gain - DNAJB9 ENSG00000128590 CDS Human protein_coding chr7:108212270 chr7:108212273 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_117963 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:108212262-108212281
64251 chr3 193336664 193336664 1 + C T STAD 193336663 + 193336643 193336683 41 ATATTTATCTTTAAGGTTCTCCGGAAGAAACGGCGTTTAGA ATATTTATCTTTAAGGTTCTCTGGAAGAAACGGCGTTTAGA < 41bp 0.541479359865532 0.765323500218887 0.8703395 0.49923038 prediction 0.44768828070671 Functional Gain - OPA1 ENSG00000198836 CDS Human protein_coding chr3:193336663 chr3:193336664 nonsynonymous SNV 0.941 0 22 hm5C_associated_SNPs_117964 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:193336641-193336669
64251 chr9 102626123 102626123 1 + C A OV 102626119 + 102626099 102626139 41 TCTCCACCTTCCATCATTGACAAGCTCTTCCTGGACACCCT TCTCCACCTTCCATCATTGACAAGATCTTCCTGGACACCCT < 41bp 0.3227475020939 0.723838190415129 0.4074778 0.3447027 prediction 0.447676380830258 Functional Gain - NR4A3 ENSG00000119508 CDS Human protein_coding chr9:102626119 chr9:102626123 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_117971 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:102626098-102626152
64251 chr1 14075948 14075948 1 + C A HNSC 14075947 + 14075927 14075967 41 TGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCC TGAGGAAGAGCGAGCCAGCGCACGGAGCAAGCGGAGCTCCC < 41bp 0.57062656045486 0.794462550172144 0.67409766 0.8563667 prediction 0.447671979434567 Functional Gain - PRDM2 ENSG00000116731 CDS Human protein_coding chr1:14075947 chr1:14075948 synonymous SNV . 0 22 hm5C_associated_SNPs_117972 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:14075919-14075954
64251 chr12 27641445 27641445 1 + C T UCEC 27641444 + 27641424 27641464 41 CAAATTGAAAAGCTGGAGGACCGGGGCCTTGACCTTGATCA CAAATTGAAAAGCTGGAGGACTGGGGCCTTGACCTTGATCA < 41bp 0.513383050589593 0.737213963639202 0.6364056 0.44859612 prediction 0.447661826099217 Functional Gain - SMCO2 ENSG00000165935 CDS Human protein_coding chr12:27641444 chr12:27641445 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_117976 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:27641431-27641456
64251 chr16 21172574 21172574 1 + T A SKCM 21172570 + 21172550 21172590 41 TGCAGAAGAAGCTGTCTCTGCTGATAGACTCCTTCCAGAAT TGCAGAAGAAGCTGTCTCTGCTGAAAGACTCCTTCCAGAAT < 41bp 0.381804970291448 0.723828964782584 0.109571576 0.160537 prediction 0.447657929565168 Functional Gain - TMEM159 ENSG00000011638 CDS Human protein_coding chr16:21172570 chr16:21172574 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_117977 0 0 1 ZNF622 POSTAR2 ENCODE chr16:21172510-21172601
64251 chr11 118869151 118869151 1 + C A rs34451365 118869150 + 118869130 118869170 41 TCTGCGGCAGGTGGAGGCGGCCCGCAAGGCCATCCGCGCCG TCTGCGGCAGGTGGAGGCGGCACGCAAGGCCATCCGCGCCG < 41bp 0.572301058566278 0.796113119776643 0.27342397 0.25362056 prediction 0.44762412242073 Functional Gain - CCDC84 ENSG00000186166 CDS Human protein_coding chr11:118869150 chr11:118869151 synonymous SNV . 0 22 hm5C_associated_SNPs_117984 0 0 2 PPIG POSTAR2 ENCODE chr11:118869138-118869167
64251 chrX 153248117 153248117 1 + C A STAD 153248116 + 153248096 153248136 41 GCTTTGGGGGTGCTCTCTTGCCTGGGCTTTGTGGTCCTCAA GCTTTGGGGGTGCTCTCTTGCATGGGCTTTGTGGTCCTCAA < 41bp 0.590857080955366 0.814656526597634 0.8697874 0.91700864 prediction 0.447598891284536 Functional Gain - TMEM187 ENSG00000177854 CDS Human protein_coding chrX:153248116 chrX:153248117 nonsynonymous SNV 0.941 2 22 hm5C_associated_SNPs_117987 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:153248067-153248135
64251 chr1 223933061 223933061 1 + C T rs17597 223933060 + 223933040 223933080 41 GGTGGATGACAGGCTGCCCACCAAGGACGGGGAGCTGCTCT GGTGGATGACAGGCTGCCCACTAAGGACGGGGAGCTGCTCT < 41bp 0.50729707121107 0.731086740408501 0.07599321 0.036284506 prediction 0.44757933839486 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223933060 chr1:223933061 synonymous SNV . 0 22 hm5C_associated_SNPs_117992 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:223933060-223933061
64251 chr6 42993026 42993026 1 + C A GBM 42993025 + 42993005 42993045 41 CTGGAAATGTCAGCCAAGATCCGAGTACCATTTTTACGTCA CTGGAAATGTCAGCCAAGATCAGAGTACCATTTTTACGTCA < 41bp 0.455275145263616 0.723784062334879 0.7326437 0.92471087 prediction 0.447568124669758 Functional Gain - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42993025 chr6:42993026 synonymous SNV . 0 22 hm5C_associated_SNPs_117993 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:42993001-42993030
64251 chr1 25628038 25628038 1 + C G COAD 25628037 + 25628017 25628057 41 TCTTCTTGTGGATGTTCTGGCCAAGTTTCAACTCTGCTCTG TCTTCTTGTGGATGTTCTGGCGAAGTTTCAACTCTGCTCTG < 41bp 0.401775653899818 0.723776184211663 0.22862324 0.7081655 prediction 0.447552368423326 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25628037 chr1:25628038 nonsynonymous SNV 0.966 4 22 hm5C_associated_SNPs_117997 0 0 2 SND1 POSTAR2 ENCODE chr1:25628010-25628109
64251 chr2 231912001 231912001 1 + A G rs146241761 231911998 + 231911978 231912018 41 GTCTCTCTGTCTCGGTTTCTCTGAGCCACTGAGACAGATGG GTCTCTCTGTCTCGGTTTCTCTGGGCCACTGAGACAGATGG < 41bp 0.544624182122904 0.768389758056339 0.73453283 0.8816706 prediction 0.447531151866869 Functional Gain - C2orf72 ENSG00000204128 UTR3 Human protein_coding chr2:231911998 chr2:231912001 . . 0 24 hm5C_associated_SNPs_118003 0 0 1 EIF3H POSTAR2 ENCODE chr2:231911980-231912019
64251 chr13 53036541 53036541 1 + A G BLCA 53036538 + 53036518 53036558 41 AAGCTGGCAAAGGAAGAGTGCTAAAAAGGCCCCCTAATTCA AAGCTGGCAAAGGAAGAGTGCTAGAAAGGCCCCCTAATTCA < 41bp 0.53386861964976 0.757609311232625 0.030308813 0.06617999 prediction 0.44748138316573 Functional Gain - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53036538 chr13:53036541 nonsynonymous SNV 0.031 3 24 hm5C_associated_SNPs_118008 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr13:53036499-53036630
64251 chr19 1081908 1081908 1 + C A CESC 1081904 + 1081884 1081924 41 ACGGCAAGGAGCTGGTCGAGCTGTCGCAGGCCTCGCCCCAC ACGGCAAGGAGCTGGTCGAGCTGTAGCAGGCCTCGCCCCAC < 41bp 0.310373285387123 0.723727317680539 0.2575572 0.5709915 prediction 0.447454635361079 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1081904 chr19:1081908 stopgain 0.760 1 25 hm5C_associated_SNPs_118013 0 0 1 DDX24 POSTAR2 ENCODE chr19:1081855-1081912
64251 chr17 38319960 38319960 1 + C T STAD 38319959 + 38319939 38319979 41 GCTGGTGGGCAGCATGGTGGCCGGTCTGGTGAGACTGTTAA GCTGGTGGGCAGCATGGTGGCTGGTCTGGTGAGACTGTTAA < 41bp 0.548559177711219 0.77228462001573 0.2229988 0.15845531 prediction 0.44745088460902 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38319959 chr17:38319960 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_118016 0 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:38319892-38320026
64251 chr19 55898060 55898060 1 + C A UCEC 55898059 + 55898039 55898079 41 GGTGGTCATTAAGCGGAGATCCGGTGAGTTTTGTCTGGTTT GGTGGTCATTAAGCGGAGATCAGGTGAGTTTTGTCTGGTTT < 41bp 0.611934057738793 0.83565070508421 0.45040655 0.85439533 prediction 0.447433294690835 Functional Gain - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55898059 chr19:55898060 synonymous SNV . 0 22 hm5C_associated_SNPs_118018 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:55898032-55898062
64251 chr1 1469921 1469921 1 + C A rs187397098 1469920 + 1469900 1469940 41 CCCCCTGTGGCCGGCATGCCCCGATCTTTCACACACTGGTG CCCCCTGTGGCCGGCATGCCCAGATCTTTCACACACTGGTG < 41bp 0.483745100500091 0.723705182795116 0.029851198 0.4131913 prediction 0.447410365590231 Functional Gain - ATAD3A ENSG00000197785 UTR3 Human protein_coding chr1:1469920 chr1:1469921 . . 0 22 hm5C_associated_SNPs_118026 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:1469889-1469936
64251 chr17 47004478 47004478 1 + T C SKCM 47004476 + 47004456 47004496 41 CTGGGACAGAGACAGACCTTCATGGGAGCCTGAGGGTTTAG CTGGGACAGAGACAGACCTTCACGGGAGCCTGAGGGTTTAG < 41bp 0.600618230014663 0.824319203956541 0.71523815 0.5188533 prediction 0.447401947883758 Functional Gain - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004476 chr17:47004478 synonymous SNV . 0 23 hm5C_associated_SNPs_118028 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47004370-47004485
64251 chr16 88729788 88729788 1 + C A rs3794628 88729784 + 88729764 88729804 41 GCGCCTGGCGTCCGCGTCGGCGATCCGGGGTCTGGGCGCGG GCGCCTGGCGTCCGCGTCGGCGATACGGGGTCTGGGCGCGG < 41bp 0.375328025480876 0.723697414834195 0.42757824 0.78440744 prediction 0.447394829668391 Functional Gain - SNAI3-AS1 ENSG00000260630 ncRNA_exonic Human antisense chr16:88729784 chr16:88729788 . . 0 25 hm5C_associated_SNPs_118031 0 0 9 DICER1 POSTAR2 GSE55333,GSM1334288 chr16:88729778-88729798
64251 chr14 57858246 57858246 1 + C T OV 57858245 + 57858225 57858265 41 GTGCGGCTGCTGTCTTCGTCCCTGACCGCCGACTGCAGCTT GTGCGGCTGCTGTCTTCGTCCTTGACCGCCGACTGCAGCTT < 41bp 0.468543828646003 0.723692878715208 0.10830557 0.12517524 prediction 0.447385757430417 Functional Gain - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57858245 chr14:57858246 synonymous SNV . 0 22 hm5C_associated_SNPs_118033 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr14:57858245-57858246
64251 chr19 10225355 10225355 1 + C A UCEC 10225354 + 10225334 10225374 41 AGCACTGGCCAAGCCCTGCCCCTCAATGCCACAGCCGCCCC AGCACTGGCCAAGCCCTGCCCATCAATGCCACAGCCGCCCC < 41bp 0.560969840925183 0.784650299207636 0.039593756 0.08255911 prediction 0.447360916564906 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225354 chr19:10225355 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_118038 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10225331-10225367
64251 chr8 15508249 15508249 1 + T G STAD 15508246 + 15508226 15508266 41 AAATACTGGCGAACTCCTGGCGCTATTCATCTGCTTTTTGT AAATACTGGCGAACTCCTGGCGCGATTCATCTGCTTTTTGT < 41bp 0.346597484144898 0.723677964691119 0.045183152 0.10695234 prediction 0.447355929382239 Functional Gain - TUSC3 ENSG00000104723 CDS Human protein_coding chr8:15508246 chr8:15508249 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_118041 0 0 4 IGF2BP2 POSTAR2 ENCODE chr8:15508223-15508283
64251 chr3 47454066 47454066 1 + T C UVM 47454064 + 47454044 47454084 41 TGGAGCAGGTCCTGCAGCGCCATGGTGTGCCTCCTCCATGC TGGAGCAGGTCCTGCAGCGCCACGGTGTGCCTCCTCCATGC < 41bp 0.607294634335612 0.830971357099939 0.20718357 0.3299301 prediction 0.447353445528653 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47454064 chr3:47454066 synonymous SNV . 0 23 hm5C_associated_SNPs_118042 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:47454033-47454069
64251 chr16 58542880 58542880 1 + C T SKCM 58542879 + 58542859 58542899 41 TCCTCAGGTGGAGTGCAACTCCAAACTGGACCCGACCACTA TCCTCAGGTGGAGTGCAACTCTAAACTGGACCCGACCACTA < 41bp 0.576353330622215 0.800027605712761 0.3889038 0.28272557 prediction 0.447348550181092 Functional Gain - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58542879 chr16:58542880 synonymous SNV . 0 22 hm5C_associated_SNPs_118043 0 0 1 DGCR8 POSTAR2 ENCODE chr16:58542863-58542899
64251 chr17 59482690 59482690 1 + C T rs189227009 59482689 + 59482669 59482709 41 CCCCACTCGCTTGACCGAACCCGAGCGCGCCCGGGAGCGGC CCCCACTCGCTTGACCGAACCTGAGCGCGCCCGGGAGCGGC < 41bp 0.499273399160281 0.723672852186678 0.2928082 0.30940187 prediction 0.447345704373355 Functional Gain - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59482689 chr17:59482690 synonymous SNV . 0 22 hm5C_associated_SNPs_118044 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr17:59482664-59482690
64251 chr5 68565063 68565063 1 + T C UCEC 68565061 + 68565041 68565081 41 TTTTGCCAGGAGATTCAGACCTTGATCAGCTAACAAGAATA TTTTGCCAGGAGATTCAGACCTCGATCAGCTAACAAGAATA < 41bp 0.646993396130445 0.870656736328458 0.23918912 0.9080926 prediction 0.447326680396025 Functional Gain - CDK7 ENSG00000134058 CDS Human protein_coding chr5:68565061 chr5:68565063 synonymous SNV . 0 23 hm5C_associated_SNPs_118048 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:68565041-68565071
64251 chr15 45695670 45695670 1 + A G UCEC 45695667 + 45695647 45695687 41 TGTGGGAGCCACTAACCGGCCGGACGCTCTAGACCCAGCGC TGTGGGAGCCACTAACCGGCCGGGCGCTCTAGACCCAGCGC < 41bp 0.556932570495413 0.780586638027298 0.24726513 0.70949584 prediction 0.44730813506377 Functional Gain - SPATA5L1 ENSG00000171763 CDS Human protein_coding chr15:45695667 chr15:45695670 nonsynonymous SNV 0.868 4 24 hm5C_associated_SNPs_118050 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr15:45695648-45695673
64251 chr17 75208180 75208180 1 + C T STAD 75208179 + 75208159 75208199 41 GAGCCCACAGCATCACCTCTCCGGGTGGGAACAATGTGCAG GAGCCCACAGCATCACCTCTCTGGGTGGGAACAATGTGCAG < 41bp 0.571962256184858 0.795616203040213 0.8886517 0.3926457 prediction 0.44730789371071 Functional Gain - SEC14L1 ENSG00000129657 CDS Human protein_coding chr17:75208179 chr17:75208180 nonsynonymous SNV 0.924 1 22 hm5C_associated_SNPs_118051 0 0 1 RBM47 POSTAR2 GSE58380,GSM1409656 chr17:75208160-75208180
64251 chr14 67850225 67850225 1 + T G rs148521707 67850223 + 67850203 67850243 41 TCCTGGCTGTAAATCCTAGACTTGAAAGTTTTCCAGTATTG TCCTGGCTGTAAATCCTAGACTGGAAAGTTTTCCAGTATTG < 41bp 0.446738119183906 0.723650352749729 0.08288959 0.2908477 prediction 0.447300705499459 Functional Gain - EIF2S1 ENSG00000134001 UTR3 Human protein_coding chr14:67850223 chr14:67850225 . . 0 23 hm5C_associated_SNPs_118052 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:67850105-67850239
64251 chr16 90002205 90002205 1 + C T UCEC 90002204 + 90002184 90002224 41 AGGAGTCGGAGGCCCAGGGCCCCAAGTGAAGCTGCTCGCAG AGGAGTCGGAGGCCCAGGGCCTCAAGTGAAGCTGCTCGCAG < 41bp 0.565177012553361 0.788825554330998 0.42715222 0.84750724 prediction 0.447297083555274 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90002204 chr16:90002205 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_118056 0 0 1 LARP4 POSTAR2 ENCODE chr16:90002202-90002249
64251 chr3 9786134 9786134 1 + C T SKCM 9786133 + 9786113 9786153 41 GCGCAAGCGGGGTAGGAGCCCCCGGCCCAGTTCGAGCTCAG GCGCAAGCGGGGTAGGAGCCCTCGGCCCAGTTCGAGCTCAG < 41bp 0.467332952686119 0.723643852187123 0.36137855 0.24155405 prediction 0.447287704374245 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9786133 chr3:9786134 synonymous SNV . 0 22 hm5C_associated_SNPs_118058 0 0 1 FMR1 POSTAR2 ENCODE chr3:9786116-9786149
64251 chr19 54377624 54377624 1 + C T LUSC 54377623 + 54377603 54377643 41 TCGAGAGATGTAAGCTGCAGCCGCAGCCATGCCTACTACGT TCGAGAGATGTAAGCTGCAGCTGCAGCCATGCCTACTACGT < 41bp 0.538049844503889 0.76168846393235 0.18967924 0.23234984 prediction 0.447277238856922 Functional Gain - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377623 chr19:54377624 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_118061 0 0 2 SND1 POSTAR2 ENCODE chr19:54377621-54377632
64251 chr2 36740766 36740766 1 + T C STAD 36740764 + 36740744 36740784 41 TCACCGTGGATGGTCATCATCATAAAAATGAGGAGAGCTGG TCACCGTGGATGGTCATCATCACAAAAATGAGGAGAGCTGG < 41bp 0.436695544878452 0.723638136956883 0.34057832 0.23712984 prediction 0.447276273913767 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36740764 chr2:36740766 synonymous SNV . 0 23 hm5C_associated_SNPs_118062 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:36740766-36740767
64251 chr5 150647641 150647641 1 + C T rs184763035 150647640 + 150647620 150647660 41 TTGTTTACAAACTCAGGTACCCGCAGGGCCTAGCAAGAGAC TTGTTTACAAACTCAGGTACCTGCAGGGCCTAGCAAGAGAC < 41bp 0.522223021627373 0.745860715595139 0.075282246 0.2995753 prediction 0.447275387935532 Functional Gain - GM2A ENSG00000196743 UTR3 Human protein_coding chr5:150647640 chr5:150647641 . . 0 22 hm5C_associated_SNPs_118063 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:150647622-150647650
64251 chr16 89293607 89293607 1 + C G rs186658378 89293603 + 89293583 89293623 41 TTACTGGTCGCGTGCAAGTCCACCCTGGGGAAAAGCCCTGT TTACTGGTCGCGTGCAAGTCCACCGTGGGGAAAAGCCCTGT < 41bp 0.428180273604931 0.723628555353687 0.11405802 0.2552024 prediction 0.447257110707374 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293603 chr16:89293607 nonsynonymous SNV 0.003 1 25 hm5C_associated_SNPs_118069 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr16:89293583-89293612
64251 chr17 40177411 40177411 1 + C G rs34326614 40177410 + 40177390 40177430 41 CTCAGGAGGGTGGGCACACACCCAGCGGCCTGCAGAGTAAG CTCAGGAGGGTGGGCACACACGCAGCGGCCTGCAGAGTAAG < 41bp 0.603484381601394 0.827107280634324 0.25525665 0.40684083 prediction 0.447245798065859 Functional Gain - NKIRAS2 ENSG00000168256 UTR3 Human protein_coding chr17:40177410 chr17:40177411 . . 0 22 hm5C_associated_SNPs_118071 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:40177361-40177426
64251 chr2 46986954 46986954 1 + C T UCEC 46986953 + 46986933 46986973 41 TACAACAGATCCCTGCATGCCCGAATTGAGCAGTGGAATCA TACAACAGATCCCTGCATGCCTGAATTGAGCAGTGGAATCA < 41bp 0.561678086863807 0.785296228719493 0.042481095 0.05642453 prediction 0.447236283711371 Functional Gain - SOCS5 ENSG00000171150 CDS Human protein_coding chr2:46986953 chr2:46986954 stopgain 0.998 1 22 hm5C_associated_SNPs_118072 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:46986922-46986955
64251 chr8 38928862 38928862 1 + A G BLCA 38928859 + 38928839 38928879 41 TTGTTTCATTGAAGTGAATTCTAAAGGTGACAGATTTGGCA TTGTTTCATTGAAGTGAATTCTAGAGGTGACAGATTTGGCA < 41bp 0.497797879068559 0.723615463000621 0.48776355 0.7286331 prediction 0.447230926001241 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38928859 chr8:38928862 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_118073 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:38928847-38928876
64251 chr2 120003145 120003145 1 + C T SKCM 120003144 + 120003124 120003164 41 GATAGTAGCCTTGCCAAGGTCCCCGATGAGGCCCCCAAAGT GATAGTAGCCTTGCCAAGGTCTCCGATGAGGCCCCCAAAGT < 41bp 0.459080031590886 0.723614450605572 0.023881912 0.06985536 prediction 0.447228901211145 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120003144 chr2:120003145 nonsynonymous SNV 0.010 0 22 hm5C_associated_SNPs_118075 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:120003145-120003146
64251 chr11 70194447 70194447 1 + C T LUSC 70194446 + 70194426 70194466 41 CGCTTGCTAGCTCCTCCCCTCCGGGCAGTGGGCGCTCCACC CGCTTGCTAGCTCCTCCCCTCTGGGCAGTGGGCGCTCCACC < 41bp 0.561432961050041 0.785039920832596 0.9310696 0.37778378 prediction 0.44721391956511 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70194446 chr11:70194447 nonsynonymous SNV 0.857 4 22 hm5C_associated_SNPs_118079 0 0 4 DDX24 POSTAR2 ENCODE chr11:70194417-70194464
64251 chr1 1455603 1455603 1 + C T STAD 1455602 + 1455582 1455622 41 GGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACA GGCCCGGGCGCGCGCCAAGGCTGAGCGGGAGAATGCAGACA < 41bp 0.489824050806808 0.72360631457362 0.4823466 0.18945974 prediction 0.447212629147241 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1455602 chr1:1455603 synonymous SNV . 0 22 hm5C_associated_SNPs_118080 0 0 2 GEMIN5 POSTAR2 ENCODE chr1:1455553-1455603
64251 chr11 12244287 12244287 1 + T C rs537018036 12244285 + 12244265 12244305 41 ACTCACACTGTGTCAGGCCCCATCAGGCAAGTCCATTGCTG ACTCACACTGTGTCAGGCCCCACCAGGCAAGTCCATTGCTG < 41bp 0.436073125611739 0.723585527388024 0.2477017 0.27697784 prediction 0.447171054776048 Functional Gain - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12244285 chr11:12244287 synonymous SNV . 0 23 hm5C_associated_SNPs_118090 0 0 2 DDX24 POSTAR2 ENCODE chr11:12244244-12244291
64251 chr13 20221185 20221185 1 + C T LGG 20221184 + 20221164 20221204 41 CATGAGTGCTGAGGAGGATACCGATGTCAGAGGCAGGAGGA CATGAGTGCTGAGGAGGATACTGATGTCAGAGGCAGGAGGA < 41bp 0.490260004134466 0.723577256506173 0.37270212 0.2772552 prediction 0.447154513012347 Functional Gain - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20221184 chr13:20221185 synonymous SNV . 0 22 hm5C_associated_SNPs_118094 0 0 2 RBM22 POSTAR2 ENCODE chr13:20221141-20221312
64251 chr20 62566916 62566916 1 + A G rs115323539 62566913 + 62566893 62566933 41 GAAACATGAAAGCTGATTTTCTGAGCAGCAGATACGGTCAG GAAACATGAAAGCTGATTTTCTGGGCAGCAGATACGGTCAG < 41bp 0.547098673122873 0.770670550178828 0.74379635 0.85550725 prediction 0.447143754111911 Functional Gain - DNAJC5 ENSG00000101152 UTR3 Human protein_coding chr20:62566913 chr20:62566916 . . 0 24 hm5C_associated_SNPs_118095 1 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr20:62566898-62566919
64251 chrX 48673388 48673388 1 + C T STAD 48673387 + 48673367 48673407 41 AGGGTGAGATGGCCGCCACTCCGGCAGGGTTCGCCCAGCTA AGGGTGAGATGGCCGCCACTCTGGCAGGGTTCGCCCAGCTA < 41bp 0.532233727823328 0.755795987797078 0.23129752 0.07656875 prediction 0.447124519947502 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48673387 chrX:48673388 nonsynonymous SNV 0.970 4 22 hm5C_associated_SNPs_118098 0 0 13 FMR1 POSTAR2 GSE39682,GSM977616 chrX:48673377-48673399
64251 chr1 36039924 36039924 1 - G C rs552087869 36039925 - 36039905 36039945 41 CGTGCGCGCCGTCGGCCAGGCCGTGCAGGAGCCGGGGCACG CGTGCGCGCCGTCGGCCAGGCGGTGCAGGAGCCGGGGCACG < 41bp 0.415013932179486 0.723558563614297 0.25064275 0.8173789 prediction 0.447117127228593 Functional Gain - TFAP2E ENSG00000116819 CDS Human protein_coding chr1:36039925 chr1:36039924 nonsynonymous SNV 0.939 2 22 hm5C_associated_SNPs_118100 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585668 chr1:36039892-36039934
64251 chr16 56857697 56857697 1 + C T COAD 56857696 + 56857676 56857716 41 GCAACGGATGCCCTGAAGAACCGCAGCAGCGTGGAAGTGCG GCAACGGATGCCCTGAAGAACTGCAGCAGCGTGGAAGTGCG < 41bp 0.607886566839374 0.831436328435357 0.32923093 0.42533535 prediction 0.447099523191965 Functional Gain - NUP93 ENSG00000102900 CDS Human protein_coding chr16:56857696 chr16:56857697 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_118104 0 0 3 DDX24 POSTAR2 ENCODE chr16:56857652-56857763
64251 chr4 154259043 154259043 1 + A G rs567582725 154259040 + 154259020 154259060 41 TCAGTGACGACGCATTTCCTCCCAGTACAGACCCCCCAGCC TCAGTGACGACGCATTTCCTCCCGGTACAGACCCCCCAGCC < 41bp 0.498095044660314 0.723544848374337 0.039126545 0.30831894 prediction 0.447089696748673 Functional Gain - TRIM2 ENSG00000109654 UTR3 Human protein_coding chr4:154259040 chr4:154259043 . . 0 24 hm5C_associated_SNPs_118107 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:154259016-154259044
64251 chr19 48967468 48967468 1 + C T SKCM 48967467 + 48967447 48967487 41 ACCCCAGAGGGTGAGTACATCCCGCTGGACCACCAGGATGT ACCCCAGAGGGTGAGTACATCTCGCTGGACCACCAGGATGT < 41bp 0.474243335587461 0.723529892131505 0.3448557 0.35632414 prediction 0.447059784263011 Functional Gain - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967467 chr19:48967468 nonsynonymous SNV 0.936 3 22 hm5C_associated_SNPs_118111 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:48967451-48967486
64251 chr4 160277248 160277248 1 + C T LUSC 160277247 + 160277227 160277267 41 ACAAACCTCAGTGGCATAAACCGAACGAGTCTGACCCGCGC ACAAACCTCAGTGGCATAAACTGAACGAGTCTGACCCGCGC < 41bp 0.585793241903168 0.809322984312281 0.8771568 0.8908483 prediction 0.447059484818226 Functional Gain - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160277247 chr4:160277248 nonsynonymous SNV 0.028 0 22 hm5C_associated_SNPs_118112 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:160277219-160277248
64251 chr14 68038550 68038550 1 + C T UCEC 68038549 + 68038529 68038569 41 TGCAGCTCTCAGGCGAGTTTCCGAATCTCGGTCCCCTCCTC TGCAGCTCTCAGGCGAGTTTCTGAATCTCGGTCCCCTCCTC < 41bp 0.594776821299561 0.818292168087781 0.8859141 0.8820592 prediction 0.447030693576442 Functional Gain - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68038549 chr14:68038550 stopgain 0.361 1 22 hm5C_associated_SNPs_118115 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr14:68038540-68038560
64251 chr19 14031425 14031425 1 + C T HNSC 14031424 + 14031404 14031444 41 AAGCCCCACCCTCAAGAACTCCCCAGTCGGGATCAGCCCCA AAGCCCCACCCTCAAGAACTCTCCAGTCGGGATCAGCCCCA < 41bp 0.608149225047338 0.83166272066346 0.10728657 0.9468934 prediction 0.447026991232243 Functional Gain - CC2D1A ENSG00000132024 CDS Human protein_coding chr19:14031424 chr19:14031425 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_118116 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:14031422-14031460
64251 chr7 100466214 100466214 1 + C T HNSC 100466213 + 100466193 100466233 41 CTCCCTATGGGGGCCCCACTCCAGCCTCTTACACTACCGCC CTCCCTATGGGGGCCCCACTCTAGCCTCTTACACTACCGCC < 41bp 0.557037149614341 0.780547974006034 0.5521221 0.43488008 prediction 0.447021648783386 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100466213 chr7:100466214 nonsynonymous SNV 0.905 3 22 hm5C_associated_SNPs_118117 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:100466199-100466237
64251 chr1 244218420 244218420 1 + A G rs138662107 244218417 + 244218397 244218437 41 CACTCGGGGGAGAAGCCCTACACATGCACCCAGTGCGGCAA CACTCGGGGGAGAAGCCCTACACGTGCACCCAGTGCGGCAA < 41bp 0.537937791030755 0.761443673187446 0.12784716 0.19444472 prediction 0.447011764313382 Functional Gain - ZBTB18 ENSG00000179456 CDS Human protein_coding chr1:244218417 chr1:244218420 synonymous SNV . 0 24 hm5C_associated_SNPs_118118 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:244218358-244218424
64251 chr19 10224443 10224443 1 + C T rs200236974 10224442 + 10224422 10224462 41 AGCAATGGCCTGGCCCTGTACCGCTTCAGCATCCGGAAGCA AGCAATGGCCTGGCCCTGTACTGCTTCAGCATCCGGAAGCA < 41bp 0.543038944302835 0.766535029723685 0.08052099 0.10645634 prediction 0.446992170841699 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224442 chr19:10224443 nonsynonymous SNV 0.011 3 22 hm5C_associated_SNPs_118121 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10224277-10224463
64251 chr22 37962367 37962367 1 + C A CESC 37962366 + 37962346 37962386 41 AGCCAGAGCTGATGCCCGGCCCCCAGGGGGGCAGAGGCGCC AGCCAGAGCTGATGCCCGGCCACCAGGGGGGCAGAGGCGCC < 41bp 0.57976001168923 0.803249321583334 0.2232779 0.39882934 prediction 0.446978619788208 Functional Gain - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962366 chr22:37962367 nonsynonymous SNV 0.962 2 22 hm5C_associated_SNPs_118125 0 0 1 DDX3X POSTAR2 ENCODE chr22:37962330-37962390
64251 chr12 65004498 65004498 1 + A G SKCM 65004495 + 65004475 65004515 41 CTCCTTCTTCAGGAGAGCGCCCCAGGGCAAGCCCCGCTCCG CTCCTTCTTCAGGAGAGCGCCCCGGGGCAAGCCCCGCTCCG < 41bp 0.479869155551263 0.723488340821811 0.11560109 0.4572134 prediction 0.446976681643622 Functional Gain - RASSF3 ENSG00000153179 CDS Human protein_coding chr12:65004495 chr12:65004498 nonsynonymous SNV 0.946 0 24 hm5C_associated_SNPs_118126 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:65004460-65004500
64251 chrX 103046227 103046227 1 + C G rs191185689 103046223 + 103046203 103046243 41 TGTGTAGACGAAGGGGGCATCTGGCCTTACACCTCGTTAGG TGTGTAGACGAAGGGGGCATCTGGGCTTACACCTCGTTAGG < 41bp 0.638993842804382 0.862456399149757 0.33691424 0.89560133 prediction 0.446925112690751 Functional Gain - PLP1 ENSG00000123560 UTR3 Human protein_coding chrX:103046223 chrX:103046227 . . 0 25 hm5C_associated_SNPs_118132 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chrX:103046220-103046520
64251 chr3 9979724 9979724 1 + C T LUSC 9979723 + 9979703 9979743 41 CAGGAGGCCCCGGACCTCTTCCAGTGGCTGTGCTCAGATTC CAGGAGGCCCCGGACCTCTTCTAGTGGCTGTGCTCAGATTC < 41bp 0.575334015496035 0.798795080398923 0.5915984 0.33498853 prediction 0.446922129805775 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9979723 chr3:9979724 stopgain 0.999 1 22 hm5C_associated_SNPs_118133 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr3:9979709-9979732
64251 chr8 48887327 48887327 1 + C T SKCM 48887326 + 48887306 48887346 41 ATGAGGAAGATTGGCAGTAGCCGGGGAATGGTTTCTGCATA ATGAGGAAGATTGGCAGTAGCTGGGGAATGGTTTCTGCATA < 41bp 0.550486689898978 0.773947179805302 0.9453412 0.92398274 prediction 0.446920979812647 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48887326 chr8:48887327 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_118134 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr8:48887285-48887333
64251 chr8 97847326 97847326 1 + C T COAD 97847325 + 97847305 97847345 41 TACTCAAGGACGGTGCAATACCGAACGCAGGGGGCGGTGGA TACTCAAGGACGGTGCAATACTGAACGCAGGGGGCGGTGGA < 41bp 0.583858209700773 0.80731687265198 0.17646551 0.15441236 prediction 0.446917325902416 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97847325 chr8:97847326 stopgain 0.264 1 22 hm5C_associated_SNPs_118135 0 0 5 TARBP2 POSTAR2 GSE55333,GSM1548746 chr8:97847313-97847328
64251 chr6 26217493 26217493 1 + T G PAAD 26217491 + 26217471 26217511 41 ACGACGAGGAGCTAAATAAGCTTCTAGGTCGCGTGACCATC ACGACGAGGAGCTAAATAAGCTGCTAGGTCGCGTGACCATC < 41bp 0.38683382397822 0.723450155548246 0.2824918 0.35495532 prediction 0.446900311096492 Functional Gain - HIST1H2AE ENSG00000168274 CDS Human other chr6:26217491 chr6:26217493 synonymous SNV . 0 23 hm5C_associated_SNPs_118140 0 0 3 CPSF1 POSTAR2 GSE37401,GSM917673 chr6:26217474-26217499
64251 chr7 12727900 12727900 1 + C G LUAD 12727896 + 12727876 12727916 41 GGAAATGGGGAATGGGCTGTCAGACCAGACTTCTATCCTGT GGAAATGGGGAATGGGCTGTCAGAGCAGACTTCTATCCTGT < 41bp 0.436764008868658 0.723437590052934 0.32345945 0.91394585 prediction 0.446875180105868 Functional Gain - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12727896 chr7:12727900 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_118144 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:12727867-12727905
64251 chr4 69973946 69973946 1 + A G STAD 69973943 + 69973923 69973963 41 ATCAACCTGATAACATTGCTCACATGAAGGCCAGGGGAGCA ATCAACCTGATAACATTGCTCACGTGAAGGCCAGGGGAGCA < 41bp 0.490691159074492 0.723428826445764 0.27815264 0.3698858 prediction 0.446857652891528 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69973943 chr4:69973946 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_118147 0 0 1 SND1 POSTAR2 ENCODE chr4:69973941-69973983
64251 chr12 123879637 123879637 1 + C T UCEC 123879636 + 123879616 123879656 41 AGTACGGAGCGCCATGAAGTCCGAGGAACAGAAGATCAAAG AGTACGGAGCGCCATGAAGTCTGAGGAACAGAAGATCAAAG < 41bp 0.564833917880099 0.788260955809333 0.5910435 0.29868788 prediction 0.446854075858468 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123879636 chr12:123879637 stopgain . 0 22 hm5C_associated_SNPs_118148 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:123879602-123879665
64251 chr17 27071213 27071213 1 + C A STAD 27071212 + 27071192 27071232 41 GCGGGAAGCCCATGCGCGAGCCTGTGCAGGTTTCCACCTGC GCGGGAAGCCCATGCGCGAGCATGTGCAGGTTTCCACCTGC < 41bp 0.474796209116683 0.723421574752777 0.20924935 0.36848718 prediction 0.446843149505553 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27071212 chr17:27071213 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_118149 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:27071180-27071240
64251 chr1 151006456 151006456 1 + T G LUSC 151006454 + 151006434 151006474 41 TTTTGACTCCATGAAGATCCCTTCAGGACAGCCTGAGACAG TTTTGACTCCATGAAGATCCCTGCAGGACAGCCTGAGACAG < 41bp 0.658573765912412 0.881987433217739 0.01078707 0.05976203 prediction 0.446827334610654 Functional Gain - PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006454 chr1:151006456 nonsynonymous SNV 0.237 0 23 hm5C_associated_SNPs_118152 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:151006432-151006464
64251 chr3 179322659 179322659 1 + C G LUSC 179322655 + 179322635 179322675 41 CGGTTACTGCGGTGGCAGCTCTGTCTGGCCGGCCCCTTGGC CGGTTACTGCGGTGGCAGCTCTGTGTGGCCGGCCCCTTGGC < 41bp 0.61103162712321 0.834438963974976 0.48347506 0.60828245 prediction 0.446814673703531 Functional Gain - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179322655 chr3:179322659 nonsynonymous SNV 0.015 0 25 hm5C_associated_SNPs_118156 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:179322631-179322671
64251 chr19 10370476 10370476 1 + C A THCA 10370475 + 10370455 10370495 41 CCCAGGGCCCAGCGGCCACCCCGTACCACTGTTGATGTGAA CCCAGGGCCCAGCGGCCACCCAGTACCACTGTTGATGTGAA < 41bp 0.5418270046803 0.765218665224633 0.08543441 0.085203975 prediction 0.446783321088665 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10370475 chr19:10370476 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_118163 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10370423-10370585
64251 chr1 155288063 155288063 1 + T C UCEC 155288061 + 155288041 155288081 41 GAGCAGCCCTATTACCTGAACCTGATCGAGCTCTTCCTGCA GAGCAGCCCTATTACCTGAACCCGATCGAGCTCTTCCTGCA < 41bp 0.429082010546466 0.723389659943556 0.25726986 0.16269898 prediction 0.446779319887111 Functional Gain - FDPS ENSG00000160752 CDS Human protein_coding chr1:155288061 chr1:155288063 nonsynonymous SNV 0.995 2 23 hm5C_associated_SNPs_118164 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:155288026-155288083
64251 chr4 1305883 1305883 1 + C A GBM 1305882 + 1305862 1305902 41 GAAGACGTTGAGCGGCTGCCCCGCCGTGGACTCCGTGGTCA GAAGACGTTGAGCGGCTGCCCAGCCGTGGACTCCGTGGTCA < 41bp 0.480655813614138 0.723387823494465 0.060673654 0.110970974 prediction 0.44677564698893 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1305882 chr4:1305883 synonymous SNV . 0 22 hm5C_associated_SNPs_118165 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:1305879-1305896
64251 chr9 135917652 135917652 1 + T C LIHC 135917650 + 135917630 135917670 41 CACTCCGAGGTCACATTTGACATGGAGATCCTTGGCATCAT CACTCCGAGGTCACATTTGACACGGAGATCCTTGGCATCAT < 41bp 0.456688830635898 0.723384549401977 0.8476768 0.92339766 prediction 0.446769098803954 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135917650 chr9:135917652 nonsynonymous SNV 0.702 0 23 hm5C_associated_SNPs_118167 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:135917624-135917660
64251 chr16 1836869 1836869 1 + C T HNSC 1836868 + 1836848 1836888 41 TGGGCACCCGTCTTCCTGGACCGGGAGCAGAGCATCTCGCT TGGGCACCCGTCTTCCTGGACTGGGAGCAGAGCATCTCGCT < 41bp 0.544643306129206 0.768020691003249 0.8287862 0.28027672 prediction 0.446754769748085 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1836868 chr16:1836869 nonsynonymous SNV 0.963 2 22 hm5C_associated_SNPs_118169 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:1836868-1836869
64251 chr6 43111338 43111338 1 + C T SKCM 43111337 + 43111317 43111357 41 AGCAGCCCGAGGGCGAGGAGCCAGAGATGGAATGCCTCAAC AGCAGCCCGAGGGCGAGGAGCTAGAGATGGAATGCCTCAAC < 41bp 0.573086903635746 0.796458153582909 0.8905302 0.7576773 prediction 0.446742499894326 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43111337 chr6:43111338 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_118172 0 0 4 BUD13 POSTAR2 ENCODE chr6:43111313-43111359
64251 chr19 33870209 33870209 1 + C A UCEC 33870208 + 33870188 33870228 41 GGAATTAGTGTTATCCATACCCAGGCACATGCCAGCGGCTT GGAATTAGTGTTATCCATACCAAGGCACATGCCAGCGGCTT < 41bp 0.561260035747392 0.784628543503097 0.4010306 0.1339859 prediction 0.446737015511409 Functional Gain - CEBPG ENSG00000153879 CDS Human protein_coding chr19:33870208 chr19:33870209 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_118174 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:33870043-33870391
64251 chr19 57888876 57888876 1 + C T SKCM 57888875 + 57888855 57888895 41 CTTTCTGACCATCAGAAAATCCACACTGGAGAAAGAACTTA CTTTCTGACCATCAGAAAATCTACACTGGAGAAAGAACTTA < 41bp 0.489650153259148 0.723368195012773 0.08110356 0.39733937 prediction 0.446736390025546 Functional Gain - ZNF547 ENSG00000152433 CDS Human protein_coding chr19:57888875 chr19:57888876 nonsynonymous SNV 0.161 2 22 hm5C_associated_SNPs_118175 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:57888841-57888881
64251 chr11 62554088 62554088 1 + T C STAD 62554086 + 62554066 62554106 41 CCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCTTTC CCGGCGCCTGGACGACCTGCCACGGGACAGCCTTCTCTTTC < 41bp 0.572082610013451 0.795443408761998 0.90919197 0.9002063 prediction 0.446721597497095 Functional Gain - TAF6L ENSG00000162227 CDS Human protein_coding chr11:62554086 chr11:62554088 nonsynonymous SNV 0.899 1 23 hm5C_associated_SNPs_118180 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:62554066-62554104
64251 chr20 32436391 32436391 1 + C T UCEC 32436390 + 32436370 32436410 41 GGAGAATGCCAACACCAACACCGAGGTGCTCAAGAACATGG GGAGAATGCCAACACCAACACTGAGGTGCTCAAGAACATGG < 41bp 0.565770057102054 0.789130126388565 0.2604915 0.09785923 prediction 0.446720138573023 Functional Gain - CHMP4B ENSG00000101421 CDS Human protein_coding chr20:32436390 chr20:32436391 synonymous SNV . 0 22 hm5C_associated_SNPs_118181 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:32436377-32436407
64251 chr12 8926159 8926159 1 + C T COAD 8926158 + 8926138 8926178 41 CTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTC CTACCCTCTGGCCGGCTCACCTGGCGTATGTCCCTGCTCTC < 41bp 0.542127618772892 0.765487202545474 0.93551546 0.9147275 prediction 0.446719167545164 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926158 chr12:8926159 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_118182 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:8926099-8926160
64251 chr9 119460295 119460295 1 + A G STAD 119460292 + 119460272 119460312 41 AGATCATTGATACAGCTGGGCTCAGCGAGGCTGTGGGGCTG AGATCATTGATACAGCTGGGCTCGGCGAGGCTGTGGGGCTG < 41bp 0.549809933084524 0.773169413709374 0.20319688 0.15554991 prediction 0.446718961249701 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460292 chr9:119460295 nonsynonymous SNV 0.985 1 24 hm5C_associated_SNPs_118183 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:119460263-119460301
64251 chr11 1482457 1482457 1 + C A rs545323346 1482453 + 1482433 1482473 41 ACCTGACCCCTCAGCAAGAACAGCCTGCCTGGTGGCCTTCT ACCTGACCCCTCAGCAAGAACAGCATGCCTGGTGGCCTTCT < 41bp 0.346108334801788 0.723357999089674 0.41455242 0.41524416 prediction 0.446715998179348 Functional Gain - BRSK2 ENSG00000174672 UTR3 Human protein_coding chr11:1482453 chr11:1482457 . . 0 25 hm5C_associated_SNPs_118184 0 0 2 FUS POSTAR2 GSE40653,GSM998875 chr11:1482440-1482460
64251 chr7 56119480 56119480 1 + C G rs180755860 56119479 + 56119459 56119499 41 GAAGACCCGGATAGTTCCTCCCGGCCACGCCGCGCCGGCTC GAAGACCCGGATAGTTCCTCCGGGCCACGCCGCGCCGGCTC < 41bp 0.612123035352256 0.835480083966742 0.6504219 0.9265877 prediction 0.446714097228971 Functional Gain - CCT6A ENSG00000146731 UTR5 Human protein_coding chr7:56119479 chr7:56119480 . . 0 22 hm5C_associated_SNPs_118185 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:56119460-56119480
64251 chr11 71707396 71707396 1 + C A rs188341542 71707392 + 71707372 71707412 41 CATCAGTGGAAAACCCACCCCACACGCCATGGACCTCAGGG CATCAGTGGAAAACCCACCCCACAAGCCATGGACCTCAGGG < 41bp 0.317027371186576 0.723353500670128 0.036416054 0.059882343 prediction 0.446707001340255 Functional Gain - RNF121 ENSG00000137522 UTR3 Human protein_coding chr11:71707392 chr11:71707396 . . 0 25 hm5C_associated_SNPs_118189 0 0 1 GRWD1 POSTAR2 ENCODE chr11:71707320-71707424
64251 chr7 73602004 73602004 1 + C A SKCM 73602000 + 73601980 73602020 41 GAAGGAGTTGCCCACAGAGCCCCCCTACACAGCATACGTAG GAAGGAGTTGCCCACAGAGCCCCCATACACAGCATACGTAG < 41bp 0.296388883500336 0.723352944310479 0.017479569 0.038995564 prediction 0.446705888620959 Functional Gain - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73602000 chr7:73602004 synonymous SNV . 0 25 hm5C_associated_SNPs_118190 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:73602000-73602020
64251 chr1 173826774 173826774 1 + T C GBM 173826772 + 173826752 173826792 41 ATACCCCAGATTCTGTCCCTCCTGAGGAACTGAAGCCCTAT ATACCCCAGATTCTGTCCCTCCCGAGGAACTGAAGCCCTAT < 41bp 0.443717213655103 0.723344795624103 0.14146444 0.21548638 prediction 0.446689591248206 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173826772 chr1:173826774 synonymous SNV . 0 23 hm5C_associated_SNPs_118198 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:173826747-173826783
64251 chr20 43118107 43118107 1 + C T ESCA 43118106 + 43118086 43118126 41 CCTGGGCCAGACGCTGCTGCCCGAGGGCCTGACCTCAGATG CCTGGGCCAGACGCTGCTGCCTGAGGGCCTGACCTCAGATG < 41bp 0.54317734621263 0.766505552922176 0.28244996 0.114237785 prediction 0.446656413419092 Functional Gain - TTPAL ENSG00000124120 CDS Human protein_coding chr20:43118106 chr20:43118107 synonymous SNV . 0 22 hm5C_associated_SNPs_118203 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:43118101-43118123
64251 chr19 1269331 1269331 1 + C A rs147512234 1269330 + 1269310 1269350 41 CGGGCTCGGGGACGCCCCCCCCTCACTCGCGCGTTAGGAGG CGGGCTCGGGGACGCCCCCCCATCACTCGCGCGTTAGGAGG < 41bp 0.498207317289471 0.723327475214041 0.1213741 0.25118932 prediction 0.446654950428082 Functional Gain - CIRBP-AS1 ENSG00000267493 ncRNA_intronic Human antisense chr19:1269330 chr19:1269331 . . 0 22 hm5C_associated_SNPs_118204 0 0 1 NCBP2 POSTAR2 ENCODE chr19:1269331-1269427
64251 chr11 58892632 58892632 1 + C T SKCM 58892631 + 58892611 58892651 41 TTATTACTTTTGTAGTTTGCCCCGAAAATATAGGCAAATAA TTATTACTTTTGTAGTTTGCCTCGAAAATATAGGCAAATAA < 41bp 0.559462834572559 0.782788995091812 0.0186252 0.11076105 prediction 0.446652321038505 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58892631 chr11:58892632 synonymous SNV . 0 22 hm5C_associated_SNPs_118205 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:58892615-58892644
64251 chr14 105715237 105715237 1 + C G rs587676941 105715233 + 105715213 105715253 41 GGCGGAACTCTACGCTCCCGCCAGCGCCGCGGCCGCGGACC GGCGGAACTCTACGCTCCCGCCAGGGCCGCGGCCGCGGACC < 41bp 0.634320953487425 0.857634658841146 0.512619 0.8451793 prediction 0.446627410707441 Functional Gain - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105715233 chr14:105715237 nonsynonymous SNV 0.029 1 25 hm5C_associated_SNPs_118210 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr14:105715220-105715240
64251 chr19 15784370 15784370 1 + C T rs181648518 15784369 + 15784349 15784389 41 CTGAGCCTGCCCTGGCTGGGCCTCAGACCGGTGGCAACGTC CTGAGCCTGCCCTGGCTGGGCTTCAGACCGGTGGCAACGTC < 41bp 0.477028094852261 0.723310362554711 0.17702776 0.21482098 prediction 0.446620725109423 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15784369 chr19:15784370 nonsynonymous SNV 0.024 2 22 hm5C_associated_SNPs_118211 0 0 7 BUD13 POSTAR2 ENCODE chr19:15784329-15784422
64251 chr7 94293686 94293686 1 + C T UCEC 94293685 + 94293665 94293705 41 ACCAGGTAGATCCAACCGAGCCGGTGGGAGGTGCCCGCATG ACCAGGTAGATCCAACCGAGCTGGTGGGAGGTGCCCGCATG < 41bp 0.550890618893513 0.77419025118578 0.8759906 0.5691894 prediction 0.446599264584534 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293685 chr7:94293686 nonsynonymous SNV 0.937 1 22 hm5C_associated_SNPs_118217 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:94293685-94293686
64251 chr12 551460 551460 1 + C T rs2302258 551459 + 551439 551479 41 GTCCATGGGAAGAATACTTTCCCTAAAGAGAGAGAAGCACT GTCCATGGGAAGAATACTTTCTCTAAAGAGAGAGAAGCACT < 41bp 0.519823164235884 0.743108886528296 0.076702654 0.9242413 prediction 0.446571444584823 Functional Gain - CCDC77 ENSG00000120647 UTR3 Human protein_coding chr12:551459 chr12:551460 . . 0 22 hm5C_associated_SNPs_118223 0 0 2 LIN28B POSTAR2 ENCODE chr12:551415-551463
64251 chr19 4488702 4488702 1 + C T UCEC 4488701 + 4488681 4488721 41 CTCCTCCGACAGCGAGGCCCCCGAGGCCAACCCCGCCGACG CTCCTCCGACAGCGAGGCCCCTGAGGCCAACCCCGCCGACG < 41bp 0.495155565992955 0.723273043258181 0.7734419 0.47670066 prediction 0.446546086516363 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4488701 chr19:4488702 synonymous SNV . 0 22 hm5C_associated_SNPs_118227 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr19:4488688-4488743
64251 chr10 69651188 69651188 1 + T C PAAD 69651186 + 69651166 69651206 41 GTTTCATGTGGAATACCTGACTTCAGGTCAAGGGATGGTAT GTTTCATGTGGAATACCTGACTCCAGGTCAAGGGATGGTAT < 41bp 0.417644110836125 0.723266093162556 0.050444216 0.9051728 prediction 0.446532186325111 Functional Gain - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69651186 chr10:69651188 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_118231 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr10:69651171-69651200
64251 chr1 227170666 227170666 1 + C T LUAD 227170665 + 227170645 227170685 41 CTTCGAGGAGCGGCCCTTCGCCGCCGCATCCATTGGGCAGG CTTCGAGGAGCGGCCCTTCGCTGCCGCATCCATTGGGCAGG < 41bp 0.565714693678061 0.78897397464589 0.1242578 0.05713737 prediction 0.446518561935659 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227170665 chr1:227170666 synonymous SNV . 0 22 hm5C_associated_SNPs_118236 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:227170660-227170680
64251 chr11 63987463 63987463 1 + C A LUAD 63987462 + 63987442 63987482 41 CAGGACGAGGCCCCTGGGGACCCCATTCAGCAGCTCAACCT CAGGACGAGGCCCCTGGGGACACCATTCAGCAGCTCAACCT < 41bp 0.4641394310969 0.723254688057932 0.38991377 0.40797332 prediction 0.446509376115864 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63987462 chr11:63987463 nonsynonymous SNV 0.839 4 22 hm5C_associated_SNPs_118239 0 0 1 DDX24 POSTAR2 ENCODE chr11:63987444-63987485
64251 chr19 39212291 39212291 1 + C T BLCA 39212290 + 39212270 39212310 41 GACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGC GACCTGGCTGCGCACCAGGACTGCGTGGAGCAGATCGCCGC < 41bp 0.462264852415453 0.723251238366853 0.21134025 0.26186708 prediction 0.446502476733706 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39212290 chr19:39212291 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_118241 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:39212280-39212318
64251 chr21 47417640 47417640 1 + C T THYM 47417639 + 47417619 47417659 41 CAGAGGAGCCCCAGGACCTGCCGGACCCCCTGGAGACCCGG CAGAGGAGCCCCAGGACCTGCTGGACCCCCTGGAGACCCGG < 41bp 0.560005199692634 0.783249375931893 0.34139138 0.39890805 prediction 0.446488352478517 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47417639 chr21:47417640 synonymous SNV . 0 22 hm5C_associated_SNPs_118243 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:47417630-47417671
64251 chr6 109764917 109764917 1 + A G UCEC 109764914 + 109764894 109764934 41 CTGCCATACTGCTCTGGACCCCCAGTGTAGGGCTGGTGCTG CTGCCATACTGCTCTGGACCCCCGGTGTAGGGCTGGTGCTG < 41bp 0.467197327195832 0.723238341032318 0.051375687 0.2033396 prediction 0.446476682064637 Functional Gain - SMPD2 ENSG00000135587 CDS Human protein_coding chr6:109764914 chr6:109764917 nonsynonymous SNV 0.336 0 24 hm5C_associated_SNPs_118246 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:109764876-109764918
64251 chr11 66243444 66243444 1 + C T LGG 66243443 + 66243423 66243463 41 GGCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAG GGCCAGGAGGCCGGCCTCTGCTTGGACCCTGGGCCGCCTAG < 41bp 0.487321437895252 0.723214210297159 0.87820315 0.87249136 prediction 0.446428420594319 Functional Gain - PELI3 ENSG00000174516 CDS Human protein_coding chr11:66243443 chr11:66243444 synonymous SNV . 0 22 hm5C_associated_SNPs_118251 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:66243442-66243488
64251 chr5 7889304 7889304 1 + C T rs2287780 7889303 + 7889283 7889323 41 CAAGGGGCAGCCGATTATAGCCGCTTTGTACGAGATGCCTG CAAGGGGCAGCCGATTATAGCTGCTTTGTACGAGATGCCTG < 41bp 0.478707749781752 0.723202581104488 0.22099045 0.2238445 prediction 0.446405162208977 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7889303 chr5:7889304 nonsynonymous SNV 0.029 3 22 hm5C_associated_SNPs_118258 2 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:7889298-7889340
64251 chr12 28458687 28458687 1 + A G BLCA 28458684 + 28458664 28458704 41 TGATGCCATTATTTCATCACCAGAGAATACACATGCAGCAA TGATGCCATTATTTCATCACCAGGGAATACACATGCAGCAA < 41bp 0.529686323714931 0.752881602422432 0.7624825 0.8772161 prediction 0.446390557415001 Functional Gain - CCDC91 ENSG00000123106 CDS Human protein_coding chr12:28458684 chr12:28458687 nonsynonymous SNV 0.078 0 24 hm5C_associated_SNPs_118260 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:28458668-28458701
64251 chr7 30890151 30890151 1 + A G GBM 30890148 + 30890128 30890168 41 ATTGTGTGGCGGGCAGGGGGCCGAGAGAGAGCCGTTGTTGC ATTGTGTGGCGGGCAGGGGGCCGGGAGAGAGCCGTTGTTGC < 41bp 0.467871011655803 0.723192817594923 0.8552395 0.9069164 prediction 0.446385635189846 Functional Gain - MINDY4 ENSG00000106125 CDS Human protein_coding chr7:30890148 chr7:30890151 synonymous SNV . 0 24 hm5C_associated_SNPs_118264 0 0 1 DDX24 POSTAR2 ENCODE chr7:30890069-30890159
64251 chr7 27835784 27835784 1 + C A SKCM 27835783 + 27835763 27835803 41 GGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACAAAA GGGGCAAGTCTGTGAAATGACAAAAGAAATTGCTGACAAAA < 41bp 0.478166207279505 0.723189173300248 0.060045928 0.23935854 prediction 0.446378346600495 Functional Gain - TAX1BP1 ENSG00000106052 CDS Human protein_coding chr7:27835783 chr7:27835784 synonymous SNV . 0 22 hm5C_associated_SNPs_118266 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:27835754-27835830
64251 chr17 42267999 42267999 1 + C A UCEC 42267998 + 42267978 42268018 41 ATTCACTGCCACCGCTCACCCCCAGGGTCAGCTGTTCCAGG ATTCACTGCCACCGCTCACCCACAGGGTCAGCTGTTCCAGG < 41bp 0.584380234358717 0.807565079797237 0.17486691 0.18920553 prediction 0.446369690877038 Functional Gain - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42267998 chr17:42267999 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_118267 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:42267977-42268004
64251 chr3 191093144 191093144 1 + A G LIHC 191093141 + 191093121 191093161 41 CGATCAGTGGTGAAGTGTTTCTGAGCACTGAATGTGATGAC CGATCAGTGGTGAAGTGTTTCTGGGCACTGAATGTGATGAC < 41bp 0.498233174669231 0.723184714918462 0.07167432 0.24213302 prediction 0.446369429836925 Functional Gain - CCDC50 ENSG00000152492 CDS Human protein_coding chr3:191093141 chr3:191093144 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_118269 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:191093122-191093154
64251 chr14 23946746 23946746 1 + C A UCEC 23946745 + 23946725 23946765 41 TTAAGAAGCGGAAGAAGATACCTCAGAAAGGTCGGAAGAAA TTAAGAAGCGGAAGAAGATACATCAGAAAGGTCGGAAGAAA < 41bp 0.473695997891036 0.723173233997583 0.122282416 0.066333115 prediction 0.446346467995165 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23946745 chr14:23946746 nonsynonymous SNV 0.831 0 22 hm5C_associated_SNPs_118275 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:23946677-23946750
64251 chr14 103574001 103574001 1 + C T rs199568252 103574000 + 103573980 103574020 41 GAGGTGCACCGGTTCGTGGTCCGCGAGTACCTGGCGCGGGC GAGGTGCACCGGTTCGTGGTCTGCGAGTACCTGGCGCGGGC < 41bp 0.558975319428605 0.782128444445568 0.42060336 0.29086155 prediction 0.446306250033926 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103574000 chr14:103574001 nonsynonymous SNV 0.666 4 22 hm5C_associated_SNPs_118285 0 0 1 CSTF2T POSTAR2 ENCODE chr14:103574000-103574046
64251 chr19 32845180 32845180 1 + C T COAD 32845179 + 32845159 32845199 41 GATGAGAATGCCCCACCAGGCCGGAGAAGGACAAATTCTGA GATGAGAATGCCCCACCAGGCTGGAGAAGGACAAATTCTGA < 41bp 0.550462321749124 0.773614884516702 0.38089222 0.22779775 prediction 0.446305125535157 Functional Gain - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32845179 chr19:32845180 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_118286 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:32845142-32845245
64251 chr11 209331 209331 1 + C T SKCM 209330 + 209310 209350 41 GACCGGAAGGTGGGTGCTGGCCCAAGGGGTAAAGGGGCAGG GACCGGAAGGTGGGTGCTGGCTCAAGGGGTAAAGGGGCAGG < 41bp 0.547013541837833 0.770156153427439 0.35137033 0.46282858 prediction 0.446285223179211 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209330 chr11:209331 synonymous SNV . 0 22 hm5C_associated_SNPs_118288 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:209317-209399
64251 chr16 30780716 30780716 1 + C T rs201232201 30780715 + 30780695 30780735 41 GCAGGTCCTTGGCCTCAAGTCCCAGGTATGGCCGCCGCCAG GCAGGTCCTTGGCCTCAAGTCTCAGGTATGGCCGCCGCCAG < 41bp 0.582626297025003 0.805763124436257 0.1864376 0.059534997 prediction 0.446273654822507 Functional Gain - RNF40 ENSG00000103549 CDS Human protein_coding chr16:30780715 chr16:30780716 synonymous SNV . 0 22 hm5C_associated_SNPs_118289 0 0 12 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:30780695-30780719
64251 chr17 3563641 3563641 1 + C T UCEC 3563640 + 3563620 3563660 41 TCTGTTTGTACAGAAAGAGACCGGGGTATGACCAGCTGAAC TCTGTTTGTACAGAAAGAGACTGGGGTATGACCAGCTGAAC < 41bp 0.518121333435828 0.741256830854499 0.818081 0.7615961 prediction 0.446270994837344 Functional Gain - CTNS ENSG00000040531 CDS Human protein_coding chr17:3563640 chr17:3563641 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_118290 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:3563638-3563663
64251 chr17 17697800 17697800 1 + A G rs147091667 17697797 + 17697777 17697817 41 ACAGTCCACGCATGCGGAGCCGCAGGAGGCCGACTACCTGA ACAGTCCACGCATGCGGAGCCGCGGGAGGCCGACTACCTGA < 41bp 0.555612682394051 0.778745889795461 0.78744644 0.874274 prediction 0.446266414802819 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17697797 chr17:17697800 nonsynonymous SNV 0.549 0 24 hm5C_associated_SNPs_118291 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr17:17697800-17697820
64251 chr13 79190781 79190781 1 - G A SKCM 79190782 - 79190762 79190802 41 AAAGAGAATGGGGGAATAAACCAAGTGACTGTGTACCCTAC AAAGAGAATGGGGGAATAAACTAAGTGACTGTGTACCCTAC < 41bp 0.537007640286365 0.760129061048708 0.60140866 0.50556135 prediction 0.446242841524687 Functional Gain - RNF219 ENSG00000152193 CDS Human protein_coding chr13:79190782 chr13:79190781 nonsynonymous SNV 0.946 0 22 hm5C_associated_SNPs_118297 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr13:79190747-79190781
64251 chr15 89195433 89195433 1 + C G ESCA 89195429 + 89195409 89195449 41 AGAGGACATGAGCGGCTACACAATCTACGACACGTCCACTG AGAGGACATGAGCGGCTACACAATGTACGACACGTCCACTG < 41bp 0.426887943359563 0.723117407666698 0.050343692 0.19949836 prediction 0.446234815333397 Functional Gain - ISG20 ENSG00000172183 CDS Human protein_coding chr15:89195429 chr15:89195433 nonsynonymous SNV 0.912 1 25 hm5C_associated_SNPs_118298 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:89195389-89195433
64251 chr2 111925364 111925364 1 + C G rs151236568 111925363 + 111925343 111925383 41 ACTGTACAGCCCTCCCCACGCCCCACCCATACGGTCACTGC ACTGTACAGCCCTCCCCACGCGCCACCCATACGGTCACTGC < 41bp 0.522867896632241 0.745964382031101 0.017837256 0.016710132 prediction 0.446192970797721 Functional Gain - BCL2L11 ENSG00000153094 UTR3 Human protein_coding chr2:111925363 chr2:111925364 . . 0 22 hm5C_associated_SNPs_118305 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:111925354-111925370
64251 chr6 36181735 36181735 1 + C T LUSC 36181734 + 36181714 36181754 41 TGTCTGAGCAAGAATCCCCCCCGGAGCCCCCTACTCTGAAA TGTCTGAGCAAGAATCCCCCCTGGAGCCCCCTACTCTGAAA < 41bp 0.590603574683737 0.813693905380828 0.10607517 0.090786725 prediction 0.446180661394181 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36181734 chr6:36181735 nonsynonymous SNV 0.422 0 22 hm5C_associated_SNPs_118309 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:36181715-36181750
64251 chr19 44515263 44515263 1 + C T SKCM 44515262 + 44515242 44515282 41 CTTTTGATCCATCAGCGAATCCACAGTGGAGAAAAACCATA CTTTTGATCCATCAGCGAATCTACAGTGGAGAAAAACCATA < 41bp 0.565528659120802 0.78861877092005 0.081710875 0.52299035 prediction 0.446180223598496 Functional Gain - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44515262 chr19:44515263 nonsynonymous SNV 0.013 3 22 hm5C_associated_SNPs_118310 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44515256-44515280
64251 chr20 34145273 34145273 1 + T C STAD 34145271 + 34145251 34145291 41 AATTGATCTAGGGAAGACAACGTAGTCACCCTCGGTGCTTC AATTGATCTAGGGAAGACAACGCAGTCACCCTCGGTGCTTC < 41bp 0.481673902524522 0.723087849071336 0.13807777 0.1840227 prediction 0.446175698142673 Functional Gain - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34145271 chr20:34145273 stoploss 0.995 0 23 hm5C_associated_SNPs_118311 0 0 17 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr20:34145248-34145281
64251 chr5 139002988 139002988 1 + A G UCEC 139002985 + 139002965 139003005 41 TCTGTTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTTA TCTGTTCTCTGTTGTGTGATCCCGATCCAGATGATCCTTTA < 41bp 0.51784439910404 0.740927097810095 0.048318475 0.119243324 prediction 0.446165397412111 Functional Gain - UBE2D2 ENSG00000131508 CDS Human protein_coding chr5:139002985 chr5:139002988 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_118313 0 0 20 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:139002946-139003003
64251 chr9 130570894 130570894 1 + A G rs2230270 130570891 + 130570871 130570911 41 TCGAGGAAGGGGGGCCGCCGCTGACCCTGGGCCTGGAGGGG TCGAGGAAGGGGGGCCGCCGCTGGCCCTGGGCCTGGAGGGG < 41bp 0.59037120842687 0.813446245996485 0.5861335 0.7592697 prediction 0.446150075139229 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130570891 chr9:130570894 nonsynonymous SNV 0.106 0 24 hm5C_associated_SNPs_118320 0 0 10 BUD13 POSTAR2 ENCODE chr9:130570872-130570937
64251 chr7 99123702 99123702 1 + A G UCEC 99123699 + 99123679 99123719 41 GCACACATGGCGAGAGAGGGCACAGATGCAGCGATTGTGGC GCACACATGGCGAGAGAGGGCACGGATGCAGCGATTGTGGC < 41bp 0.560293487168641 0.783366367595883 0.15116906 0.23421562 prediction 0.446145760854485 Functional Gain - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123699 chr7:99123702 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_118323 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr7:99123700-99123720
64251 chr16 84690858 84690858 1 + C A UCEC 84690854 + 84690834 84690874 41 CAGGAGGTGAGCGAGGACAACTACCTGTACCTGCAGGAGCT CAGGAGGTGAGCGAGGACAACTACATGTACCTGCAGGAGCT < 41bp 0.290041152780812 0.723056641805927 0.3025812 0.92794085 prediction 0.446113283611854 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84690854 chr16:84690858 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_118325 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:84690831-84690858
64251 chr11 12278458 12278458 1 + C T COAD 12278457 + 12278437 12278477 41 TTCTTCCACCGGGAGTGTTTCCGCTGCAGCATCTGTGCCAC TTCTTCCACCGGGAGTGTTTCTGCTGCAGCATCTGTGCCAC < 41bp 0.460028378774641 0.723040118256531 0.35014588 0.415826 prediction 0.446080236513061 Functional Gain - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12278457 chr11:12278458 nonsynonymous SNV 0.296 3 22 hm5C_associated_SNPs_118329 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:12278432-12278459
64251 chr19 39123298 39123298 1 + A G STAD 39123295 + 39123275 39123315 41 CATTGACCGCTGGCTGCTGGCCGAGATGCTCGGGGATCTGT CATTGACCGCTGGCTGCTGGCCGGGATGCTCGGGGATCTGT < 41bp 0.557325519575317 0.780363734953369 0.47236368 0.899264 prediction 0.446076430756104 Functional Gain - EIF3K ENSG00000178982 CDS Human protein_coding chr19:39123295 chr19:39123298 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_118331 0 0 13 EIF3G POSTAR2 GSE65004,GSM1585673 chr19:39123273-39123311
64251 chr13 113536943 113536943 1 + C T rs61740315 113536942 + 113536922 113536962 41 GGCTGGCTGAGTTTCGGTCTCCCCATCACCGGCCGCCTCGT GGCTGGCTGAGTTTCGGTCTCTCCATCACCGGCCGCCTCGT < 41bp 0.500137794549062 0.723175181669712 0.057877988 0.95861876 prediction 0.446074774241299 Functional Gain - ATP11A ENSG00000068650 UTR3 Human protein_coding chr13:113536942 chr13:113536943 . . 0 22 hm5C_associated_SNPs_118333 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr13:113536938-113536960
64251 chr4 100528068 100528068 1 + T A SKCM 100528064 + 100528044 100528084 41 CAGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGCTCTC CAGGAGAAGGGCCCATCAGCCACCAGGCTACCACTGCTCTC < 41bp 0.673576327896881 0.89661159605596 0.19906554 0.33565134 prediction 0.446070536318159 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100528064 chr4:100528068 nonsynonymous SNV 0.508 4 25 hm5C_associated_SNPs_118334 0 0 4 NOL12 POSTAR2 ENCODE chr4:100528015-100528078
64251 chr9 21854717 21854717 1 + C G ESCA 21854716 + 21854696 21854736 41 GAGGGACCTCGTTTTAGCTCCCGGGCAGAAAGCTTCATGTT GAGGGACCTCGTTTTAGCTCCGGGGCAGAAAGCTTCATGTT < 41bp 0.41126925927174 0.723034177903106 0.14374778 0.49171105 prediction 0.446068355806212 Functional Gain - MTAP ENSG00000099810 CDS Human protein_coding chr9:21854716 chr9:21854717 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_118336 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:21854693-21854723
64251 chr5 56527097 56527097 1 + C T STAD 56527096 + 56527076 56527116 41 CAACATACCTGACAATGAAACCGGGAGGAAAGAAGACAAGA CAACATACCTGACAATGAAACTGGGAGGAAAGAAGACAAGA < 41bp 0.53761187051832 0.760641175547473 0.21014008 0.23331645 prediction 0.446058610058306 Functional Gain - GPBP1 ENSG00000062194 CDS Human protein_coding chr5:56527096 chr5:56527097 synonymous SNV . 0 22 hm5C_associated_SNPs_118338 0 0 15 FMR1 POSTAR2 GSE39682,GSM977615 chr5:56527051-56527104
64251 chr1 40872508 40872508 1 + T A KIRC 40872504 + 40872484 40872524 41 GCACATATCCAGGGTAAAGTCAGTTAACCTCGACCAGTGGA GCACATATCCAGGGTAAAGTCAGTAAACCTCGACCAGTGGA < 41bp 0.434975452693672 0.723024542297219 0.6930342 0.7477217 prediction 0.446049084594438 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40872504 chr1:40872508 synonymous SNV . 0 25 hm5C_associated_SNPs_118339 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:40872498-40872539
64251 chr17 40125570 40125570 1 + C T COAD 40125569 + 40125549 40125589 41 GACACCCAAGACGACTGGGGCCCGGGTGGAGTTAAGCGAGC GACACCCAAGACGACTGGGGCTCGGGTGGAGTTAAGCGAGC < 41bp 0.467636767015485 0.723017801191579 0.3346244 0.32337323 prediction 0.446035602383158 Functional Gain - CNP ENSG00000173786 CDS Human protein_coding chr17:40125569 chr17:40125570 synonymous SNV . 0 22 hm5C_associated_SNPs_118345 0 0 1 LIN28B POSTAR2 ENCODE chr17:40125498-40125593
64251 chr6 26124702 26124702 1 + C A ESCA 26124701 + 26124681 26124721 41 ACAAGAAGACTCGCATCATCCCGCGCCACTTGCAGCTGGCC ACAAGAAGACTCGCATCATCCAGCGCCACTTGCAGCTGGCC < 41bp 0.588874180899831 0.811888191800614 0.3465941 0.51195335 prediction 0.446028021801565 Functional Gain - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124701 chr6:26124702 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_118346 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:26124671-26124702
64251 chr11 118520812 118520812 1 + C T SARC 118520811 + 118520791 118520831 41 CTGACCCGCTACCTGCCAATCCGGAAGGAGGACTTTGACCT CTGACCCGCTACCTGCCAATCTGGAAGGAGGACTTTGACCT < 41bp 0.587445789176893 0.810456242061316 0.4578775 0.29639402 prediction 0.446020905768846 Functional Gain - PHLDB1 ENSG00000019144 CDS Human protein_coding chr11:118520811 chr11:118520812 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_118348 0 0 1 BUD13 POSTAR2 ENCODE chr11:118520774-118520814
64251 chr1 161088991 161088991 1 + T C UCEC 161088989 + 161088969 161089009 41 GGTGGCTGTGTGCCAGGTAACATCGACGCCAGACAAGCAAC GGTGGCTGTGTGCCAGGTAACACCGACGCCAGACAAGCAAC < 41bp 0.627692827516503 0.850698871048601 0.19510788 0.22265467 prediction 0.446012087064196 Functional Gain - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161088989 chr1:161088991 nonsynonymous SNV 0.985 5 23 hm5C_associated_SNPs_118352 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:161088975-161088993
64251 chr17 57287808 57287808 1 + C T CESC 57287807 + 57287787 57287827 41 TAACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGC TAACCGAACTGAGGCAGGCTCTCAGGACTACAGCCTTCTGC < 41bp 0.547354550706235 0.770355047005454 0.2663626 0.14798835 prediction 0.446000992598439 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287807 chr17:57287808 synonymous SNV . 0 22 hm5C_associated_SNPs_118355 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:57287788-57287814
64251 chr10 50533776 50533776 1 + C A rs10857471 50533775 + 50533755 50533795 41 TTCCCCCAACCCCGGCTCCCCCGGGGAGAGCAGTGCCTGCT TTCCCCCAACCCCGGCTCCCCAGGGGAGAGCAGTGCCTGCT < 41bp 0.613399642763798 0.83639536178989 0.90197915 0.92758274 prediction 0.445991438052182 Functional Gain - C10orf71 ENSG00000177354 CDS Human protein_coding chr10:50533775 chr10:50533776 synonymous SNV . 0 22 hm5C_associated_SNPs_118356 0 0 1 UCHL5 POSTAR2 ENCODE chr10:50533700-50533797
64251 chr6 52268142 52268142 1 + A G UCEC 52268139 + 52268119 52268159 41 TGTCCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCCTT TGTCCCAGAAACGGATGTGCCCCGGCTCTTCCGGGAGCCTT < 41bp 0.543897673130173 0.766890424816301 0.0927977 0.12617394 prediction 0.445985503372257 Functional Gain - PAQR8 ENSG00000170915 CDS Human protein_coding chr6:52268139 chr6:52268142 nonsynonymous SNV 0.984 0 24 hm5C_associated_SNPs_118360 0 0 5 DDX3X POSTAR2 ENCODE chr6:52268140-52268185
64251 chr12 124171430 124171430 1 + C T STAD 124171429 + 124171409 124171449 41 GTTCAGACGGTCCTGCTTCACCGGCGTGTTTGGAGGAGACG GTTCAGACGGTCCTGCTTCACTGGCGTGTTTGGAGGAGACG < 41bp 0.541707605081423 0.764692467032499 0.604877 0.31655753 prediction 0.445969723902151 Functional Gain - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124171429 chr12:124171430 synonymous SNV . 0 22 hm5C_associated_SNPs_118363 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:124171397-124171435
64251 chr19 16339629 16339629 1 + C T SKCM 16339628 + 16339608 16339648 41 ACAGCCAACAACGTGGAGATCCACATTCCCGTGCCCAATGA ACAGCCAACAACGTGGAGATCTACATTCCCGTGCCCAATGA < 41bp 0.609183032749349 0.832161106344563 0.12761247 0.9355905 prediction 0.445956147190427 Functional Gain - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16339628 chr19:16339629 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_118367 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:16339611-16339638
64251 chr1 151140771 151140771 1 + C A OV 151140770 + 151140750 151140790 41 TCAGCCCCTGCACCCATGAGCCCCACAAGAAGACGAGCCCT TCAGCCCCTGCACCCATGAGCACCACAAGAAGACGAGCCCT < 41bp 0.46028075176659 0.722975428148406 0.010978192 0.03921327 prediction 0.445950856296811 Functional Gain - SCNM1;TNFAIP8L2-SCNM1 ENSG00000163156 CDS Human protein_coding chr1:151140770 chr1:151140771 nonsynonymous SNV 0.681 1 22 hm5C_associated_SNPs_118369 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:151140743-151140778
64251 chr1 151553436 151553436 1 + C A STAD 151553435 + 151553415 151553455 41 CAGAATTTAGAGATGCATGACCGGATGGAACACCTGATAGA CAGAATTTAGAGATGCATGACAGGATGGAACACCTGATAGA < 41bp 0.465167640358619 0.72296670212305 0.27763152 0.26149946 prediction 0.4459334042461 Functional Gain - TUFT1 ENSG00000143367 CDS Human protein_coding chr1:151553435 chr1:151553436 synonymous SNV . 0 22 hm5C_associated_SNPs_118370 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:151553421-151553453
64251 chr1 206331183 206331183 1 + T G LUAD 206331181 + 206331161 206331201 41 GGGACTGGCCCCAGCAGTCCCCTAAGGAGGGGCCTTGTGTC GGGACTGGCCCCAGCAGTCCCCGAAGGAGGGGCCTTGTGTC < 41bp 0.378613169014113 0.722964648065659 0.06877774 0.61924326 prediction 0.445929296131318 Functional Gain - CTSE ENSG00000196188 CDS Human protein_coding chr1:206331181 chr1:206331183 stoploss . 0 23 hm5C_associated_SNPs_118373 0 0 1 SND1 POSTAR2 ENCODE chr1:206331142-206331215
64251 chr22 50961552 50961552 1 + C A LIHC 50961548 + 50961528 50961568 41 TTGCGGAGCTGGTGGCTGGCCAGCCGGCCTTCGAGGTGTGT TTGCGGAGCTGGTGGCTGGCCAGCAGGCCTTCGAGGTGTGT < 41bp 0.307742018293464 0.72295649672162 0.31876573 0.3198732 prediction 0.44591299344324 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50961548 chr22:50961552 nonsynonymous SNV 0.930 2 25 hm5C_associated_SNPs_118374 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:50961532-50961560
64251 chr12 122361711 122361711 1 + C T rs34703321 122361710 + 122361690 122361730 41 GAGCTTGAGGAGAAAACCGACCGGATGCCCCAAGATGAACT GAGCTTGAGGAGAAAACCGACTGGATGCCCCAAGATGAACT < 41bp 0.475715948714125 0.722948782102201 0.16763306 0.17745209 prediction 0.445897564204402 Functional Gain - WDR66 ENSG00000158023 CDS Human protein_coding chr12:122361710 chr12:122361711 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_118377 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350198 chr12:122361706-122361735
64251 chr1 212619202 212619202 1 + C A LGG 212619201 + 212619181 212619221 41 ACGGCCAAGGAACTGGAGGCCCTGGATGAGGTCTTCACCAA ACGGCCAAGGAACTGGAGGCCATGGATGAGGTCTTCACCAA < 41bp 0.468944919857207 0.722945296288812 0.46209002 0.4384293 prediction 0.445890592577624 Functional Gain - NENF ENSG00000117691 CDS Human protein_coding chr1:212619201 chr1:212619202 nonsynonymous SNV 0.736 4 22 hm5C_associated_SNPs_118379 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:212619171-212619219
64251 chr17 78226642 78226642 1 + A G rs60962417 78226639 + 78226619 78226659 41 AGAAACCCCTGAGCAGGTAACCCAGGGAAGAGAAGGAAGCC AGAAACCCCTGAGCAGGTAACCCGGGGAAGAGAAGGAAGCC < 41bp 0.550304126159104 0.773242463327763 0.6193568 0.8889601 prediction 0.445876674337318 Functional Gain - SLC26A11 ENSG00000181045 UTR3 Human protein_coding chr17:78226639 chr17:78226642 . . 0 24 hm5C_associated_SNPs_118381 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr17:78226620-78226646
64251 chr9 139309089 139309089 1 + C T BLCA 139309088 + 139309068 139309108 41 GGCTGATGTGGTTCTGCAGCCCCGGCTAACAGGTGTGGATC GGCTGATGTGGTTCTGCAGCCTCGGCTAACAGGTGTGGATC < 41bp 0.526875970357044 0.749803962080476 0.4357304 0.28848818 prediction 0.445855983446865 Functional Gain - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139309088 chr9:139309089 synonymous SNV . 0 22 hm5C_associated_SNPs_118387 0 0 6 PPIG POSTAR2 ENCODE chr9:139309060-139309105
64251 chr6 26184240 26184240 1 + C A LUAD 26184236 + 26184216 26184256 41 TCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGC TCCTTTGTCAACGACATCTTCGAGAGCATCGCCGGCGAGGC < 41bp 0.697363599694702 0.920291144303754 0.75196403 0.54078335 prediction 0.445855089218104 Functional Gain - HIST1H2BE ENSG00000197697 CDS Human other chr6:26184236 chr6:26184240 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_118388 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:26184220-26184240
64251 chr2 232026138 232026138 1 + A G STAD 232026135 + 232026115 232026155 41 GGTTGGCGTCCTTGTATTTACCCAGTTTTGGTTCTGGTTTC GGTTGGCGTCCTTGTATTTACCCGGTTTTGGTTCTGGTTTC < 41bp 0.55530810052018 0.778218195430688 0.080608726 0.22832063 prediction 0.445820189821014 Functional Gain - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:232026135 chr2:232026138 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_118391 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:232026116-232026178
64251 chr1 16262154 16262154 1 + C T UCEC 16262153 + 16262133 16262173 41 CCCCACAGCGTGCCAGCACCCCGCAGCCAGCCCCAGCTGGT CCCCACAGCGTGCCAGCACCCTGCAGCCAGCCCCAGCTGGT < 41bp 0.493285363099811 0.722877080911592 0.23649135 0.26739204 prediction 0.445754161823184 Functional Gain - SPEN ENSG00000065526 CDS Human protein_coding chr1:16262153 chr1:16262154 nonsynonymous SNV 0.074 0 22 hm5C_associated_SNPs_118397 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:16262120-16262160
64251 chr6 26045867 26045867 1 + C A SKCM 26045863 + 26045843 26045883 41 CAGCGCCTGGTGCGAGAAATCGCCCAGGACTTCAAAACCGA CAGCGCCTGGTGCGAGAAATCGCCAAGGACTTCAAAACCGA < 41bp 0.709399855132493 0.932266991410526 0.33686495 0.89161843 prediction 0.445734272556066 Functional Gain - HIST1H3C ENSG00000196532 CDS Human other chr6:26045863 chr6:26045867 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_118401 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr7 7628158 7628158 1 + A G LUSC 7628155 + 7628135 7628175 41 AACAAAGTTGCAGTACGTGACAGAGTGGCATTTGCTTGTAA AACAAAGTTGCAGTACGTGACAGGGTGGCATTTGCTTGTAA < 41bp 0.51586661805993 0.738733236455018 0.29123804 0.8560203 prediction 0.445733236790176 Functional Gain - MIOS ENSG00000164654 CDS Human protein_coding chr7:7628155 chr7:7628158 synonymous SNV . 0 24 hm5C_associated_SNPs_118402 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr7:7628132-7628192
64251 chr7 7917073 7917073 1 + C G ESCA 7917069 + 7917049 7917089 41 GGCAGTACAGGGCACCATCACTGACCTTCCCGACCACTTAC GGCAGTACAGGGCACCATCACTGAGCTTCCCGACCACTTAC < 41bp 0.622379741106428 0.845242957085052 0.21027574 0.27481455 prediction 0.445726431957247 Functional Gain - UMAD1 ENSG00000219545 CDS Human protein_coding chr7:7917069 chr7:7917073 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_118404 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:7917071-7917085
64251 chr19 37618596 37618596 1 + A G COAD 37618593 + 37618573 37618613 41 AATGTGGGAAAGCCTTTATTCGTAGCTCACAACTTACCCGA AATGTGGGAAAGCCTTTATTCGTGGCTCACAACTTACCCGA < 41bp 0.559784836505739 0.78263542997192 0.44065574 0.8583107 prediction 0.445701186932362 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618593 chr19:37618596 nonsynonymous SNV 0.475 0 24 hm5C_associated_SNPs_118408 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr19:37618584-37618612
64251 chr2 62132845 62132845 1 + C A SKCM 62132844 + 62132824 62132864 41 GCGAGCTTGAGGGTGGCAAACCCCTGAGCGGGCTGCTGAAT GCGAGCTTGAGGGTGGCAAACACCTGAGCGGGCTGCTGAAT < 41bp 0.565911821299605 0.788761456987673 0.3944245 0.47106862 prediction 0.445699271376135 Functional Gain - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62132844 chr2:62132845 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_118409 0 0 2 DDX3X POSTAR2 ENCODE chr2:62132827-62132960
64251 chr22 50279035 50279035 1 + A G rs145536914 50279032 + 50279012 50279052 41 TCTATTTGCTCCGCAGACTCCACAAAAGTCGTGTGCTTGCA TCTATTTGCTCCGCAGACTCCACGAAAGTCGTGTGCTTGCA < 41bp 0.524454173942367 0.747303431152509 0.011125326 0.024972647 prediction 0.445698514420284 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279032 chr22:50279035 synonymous SNV . 0 24 hm5C_associated_SNPs_118410 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr22:50278983-50279042
64251 chr16 89169163 89169163 1 + A G UCEC 89169160 + 89169140 89169180 41 GATGATGCCTGAGTTCAGCCCTCAGCAGGTGAGTTGGGGTC GATGATGCCTGAGTTCAGCCCTCGGCAGGTGAGTTGGGGTC < 41bp 0.565888328337975 0.788737430369731 0.17061248 0.23489562 prediction 0.445698204063513 Functional Gain - ACSF3 ENSG00000176715 CDS Human protein_coding chr16:89169160 chr16:89169163 nonsynonymous SNV 0.718 1 24 hm5C_associated_SNPs_118411 0 0 1 PPIG POSTAR2 ENCODE chr16:89169100-89169164
64251 chr12 53836516 53836516 1 + C T COAD 53836515 + 53836495 53836535 41 AAACATGTGGAATCCCAATGCCGGTAGGTGTTTGGGGGTTC AAACATGTGGAATCCCAATGCTGGTAGGTGTTTGGGGGTTC < 41bp 0.49574200076511 0.722832659242924 0.16126543 0.20137429 prediction 0.445665318485847 Functional Gain - PRR13 ENSG00000205352 CDS Human protein_coding chr12:53836515 chr12:53836516 synonymous SNV . 0 22 hm5C_associated_SNPs_118422 0 0 14 SRSF1 POSTAR2 GSE83923,GSM2221668 chr12:53836500-53836520
64251 chr16 28602110 28602110 1 + C T STAD 28602109 + 28602089 28602129 41 CCCAGGAGACACACCCTGAGCCGGCGCCGTGTCATCCCGCT CCCAGGAGACACACCCTGAGCTGGCGCCGTGTCATCCCGCT < 41bp 0.484582385345427 0.722819216890426 0.27209145 0.09500462 prediction 0.445638433780852 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28602109 chr16:28602110 nonsynonymous SNV 0.102 2 22 hm5C_associated_SNPs_118424 0 0 3 PPIG POSTAR2 ENCODE chr16:28602093-28602174
64251 chr6 20402686 20402686 1 + C T SKCM 20402685 + 20402665 20402705 41 ACCTCCTGTTCCTCCTCCCTCCAAAGCGGCGCCGTAGCCGC ACCTCCTGTTCCTCCTCCCTCTAAAGCGGCGCCGTAGCCGC < 41bp 0.559972577541028 0.782775337369077 0.08795342 0.05803424 prediction 0.445605519656099 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402685 chr6:20402686 stopgain 0.970 0 22 hm5C_associated_SNPs_118429 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:20402631-20402689
64251 chr20 34144773 34144773 1 + C T rs543824492 34144772 + 34144752 34144792 41 GACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCA GACAAATCAGTTCTCTGTGACTAGACATGAGAAGGTTGCCA < 41bp 0.508948342993308 0.731746549834952 0.83836436 0.70899093 prediction 0.445596413683289 Functional Gain - ERGIC3 ENSG00000125991 CDS Human protein_coding chr20:34144772 chr20:34144773 synonymous SNV . 0 22 hm5C_associated_SNPs_118431 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:34144757-34144825
64251 chr7 158715138 158715138 1 + C T LUSC 158715137 + 158715117 158715157 41 GGTCTCCGTTCACGACTTACCCGAGAAGAGCTTTGTGCCCC GGTCTCCGTTCACGACTTACCTGAGAAGAGCTTTGTGCCCC < 41bp 0.561150436036977 0.783942781397825 0.68349636 0.328169 prediction 0.445584690721696 Functional Gain - WDR60 ENSG00000126870 CDS Human protein_coding chr7:158715137 chr7:158715138 synonymous SNV . 0 22 hm5C_associated_SNPs_118432 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:158715138-158715176
64251 chr12 132396530 132396530 1 + C T PAAD 132396529 + 132396509 132396549 41 TGCAGAAGACCCTGGCCTCCCCGGCTGACACCGCTGGCTTC TGCAGAAGACCCTGGCCTCCCTGGCTGACACCGCTGGCTTC < 41bp 0.479873791203183 0.722789903970806 0.8952855 0.8186159 prediction 0.445579807941612 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132396529 chr12:132396530 nonsynonymous SNV 0.063 3 22 hm5C_associated_SNPs_118433 0 0 1 PPIG POSTAR2 ENCODE chr12:132396486-132396549
64251 chr11 71498591 71498591 1 + C A rs12270466 71498590 + 71498570 71498610 41 CCCCGCCCCCGTCATGGCGCCCGAGGAGAACGCGGGGAGCG CCCCGCCCCCGTCATGGCGCCAGAGGAGAACGCGGGGAGCG < 41bp 0.465728568244586 0.722779410000762 0.39075866 0.84990174 prediction 0.445558820001524 Functional Gain - FAM86C1 ENSG00000158483 CDS Human protein_coding chr11:71498590 chr11:71498591 synonymous SNV . 0 22 hm5C_associated_SNPs_118435 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:71498591-71498592
64251 chr1 40535396 40535396 1 + C A rs187715440 40535392 + 40535372 40535412 41 TGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGA TGTATCTGATGACATGAAGACTCAAAAGAACCCTGCCCTGA < 41bp 0.299955260070667 0.722762368293446 0.045900464 0.13081807 prediction 0.445524736586892 Functional Gain - CAP1 ENSG00000131236 CDS Human protein_coding chr1:40535392 chr1:40535396 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_118439 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:40535363-40535399
64251 chr1 898587 898587 1 + C T SKCM 898586 + 898566 898606 41 TCCATGTCCACGCGCCGGGCCCGGGTGGGAGTGGCTGCGGT TCCATGTCCACGCGCCGGGCCTGGGTGGGAGTGGCTGCGGT < 41bp 0.557452864763925 0.780212910902657 0.42547244 0.38321856 prediction 0.445520092277464 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898586 chr1:898587 nonsynonymous SNV 0.841 4 22 hm5C_associated_SNPs_118441 0 0 1 RBFOX2 POSTAR2 ENCODE chr1:898571-898644
64251 chr1 24859663 24859663 1 + C T SKCM 24859662 + 24859642 24859682 41 ATCTCCCCTCCAGCCTCTCCCCCGGTGGGGTGGAAGCAGAG ATCTCCCCTCCAGCCTCTCCCTCGGTGGGGTGGAAGCAGAG < 41bp 0.599486617343852 0.822243953353101 0.19261035 0.14505449 prediction 0.445514672018498 Functional Gain - RCAN3 ENSG00000117602 CDS Human protein_coding chr1:24859662 chr1:24859663 nonsynonymous SNV 0.020 5 22 hm5C_associated_SNPs_118442 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr1:24859632-24859679
64251 chr10 114158684 114158684 1 + A G HNSC 114158681 + 114158661 114158701 41 AGGAGCACGGAAGGGGGTTTCCCAGAAGAACAATGACCTAA AGGAGCACGGAAGGGGGTTTCCCGGAAGAACAATGACCTAA < 41bp 0.520630396382154 0.743386836365071 0.29637522 0.42761 prediction 0.445512879965836 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114158681 chr10:114158684 nonsynonymous SNV 0.900 1 24 hm5C_associated_SNPs_118443 0 0 4 BUD13 POSTAR2 ENCODE chr10:114158662-114158691
64251 chr1 182853769 182853769 1 + T C rs199552563 182853767 + 182853747 182853787 41 GGATTAAACTGCAAATATCTCATGAAGCTGCTGCCTGTATC GGATTAAACTGCAAATATCTCACGAAGCTGCTGCCTGTATC < 41bp 0.633409306746304 0.856164170658161 0.23747817 0.13949752 prediction 0.445509727823714 Functional Gain - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182853767 chr1:182853769 synonymous SNV . 0 23 hm5C_associated_SNPs_118444 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:182853745-182853804
64251 chr8 39111990 39111990 1 + C A ESCA 39111986 + 39111966 39112006 41 CCAGGCTATAAGCCTCCAAACTGCCAAATACGTTCCAAAGG CCAGGCTATAAGCCTCCAAACTGCAAAATACGTTCCAAAGG < 41bp 0.294712055003381 0.722747469827644 0.089548886 0.13634104 prediction 0.445494939655288 Functional Gain - ADAM32 ENSG00000197140 CDS Human protein_coding chr8:39111986 chr8:39111990 nonsynonymous SNV 0.010 2 25 hm5C_associated_SNPs_118447 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:39111985-39112010
64251 chr7 73106929 73106929 1 + C T STAD 73106928 + 73106908 73106948 41 TGTTCCTGTTTCTTTCAGGTCCGGGGATCCCGAGCTGTCCT TGTTCCTGTTTCTTTCAGGTCTGGGGATCCCGAGCTGTCCT < 41bp 0.537909878450561 0.760657086437555 0.85680807 0.43860948 prediction 0.445494415973989 Functional Gain - BUD23 ENSG00000071462 CDS Human protein_coding chr7:73106928 chr7:73106929 nonsynonymous SNV 0.172 4 22 hm5C_associated_SNPs_118449 0 0 10 BUD13 POSTAR2 ENCODE chr7:73106917-73106991
64251 chr10 127520153 127520153 1 + T G KIRC 127520150 + 127520130 127520170 41 ATTAATGTCCCTCCACAGATCGCTCTGCCCATGTACCAGCA ATTAATGTCCCTCCACAGATCGCGCTGCCCATGTACCAGCA < 41bp 0.329599025676591 0.722746957716813 0.0326854 0.37401587 prediction 0.445493915433626 Functional Gain - BCCIP ENSG00000107949 CDS Human protein_coding chr10:127520150 chr10:127520153 synonymous SNV . 0 24 hm5C_associated_SNPs_118450 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:127520096-127520163
64251 chr19 12924157 12924157 1 + C T rs76634951 12924156 + 12924136 12924176 41 CCACAGGGAGGACTCAGCATCCGAGAATCAGGAGGGACTCA CCACAGGGAGGACTCAGCATCTGAGAATCAGGAGGGACTCA < 41bp 0.50595869629084 0.728672896122506 0.2773947 0.17927024 prediction 0.445428399663332 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924156 chr19:12924157 synonymous SNV . 0 22 hm5C_associated_SNPs_118455 2 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:12924153-12924184
64251 chr6 168363989 168363989 1 + C A rs9364373 168363988 + 168363968 168364008 41 CCTGTGGGGGCCTGTTTCATCCCGAGGGGACTGCGTGTTGC CCTGTGGGGGCCTGTTTCATCACGAGGGGACTGCGTGTTGC < 41bp 0.486652178272801 0.722704539367809 0.25324753 0.7233379 prediction 0.445409078735618 Functional Gain - AFDN ENSG00000130396 UTR3 Human protein_coding chr6:168363988 chr6:168363989 . . 0 22 hm5C_associated_SNPs_118457 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr6:168363900-168364031
64251 chr22 47189693 47189693 1 + C T LGG 47189692 + 47189672 47189712 41 TCACCCCCCAGCGGCGACCTCCGGCTGGTGAAGTCGGTCAG TCACCCCCCAGCGGCGACCTCTGGCTGGTGAAGTCGGTCAG < 41bp 0.513067709050233 0.735770438709628 0.85487956 0.5214042 prediction 0.445405459318789 Functional Gain - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47189692 chr22:47189693 nonsynonymous SNV 0.733 4 22 hm5C_associated_SNPs_118458 0 0 2 BUD13 POSTAR2 ENCODE chr22:47189686-47189729
64251 chr3 9932307 9932307 1 + C A rs184001286 9932306 + 9932286 9932326 41 CGGAAGTTCTCTTCACGGAGCCGCGCGGCTGCGGGGGCGCA CGGAAGTTCTCTTCACGGAGCAGCGCGGCTGCGGGGGCGCA < 41bp 0.521225199317105 0.743924253693046 0.3162459 0.5173712 prediction 0.44539810875188 Functional Gain - JAGN1 ENSG00000171135 UTR5 Human protein_coding chr3:9932306 chr3:9932307 . . 0 22 hm5C_associated_SNPs_118460 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr3:9932300-9932340
64251 chr12 117013834 117013834 1 + C A rs539169146 117013833 + 117013813 117013853 41 TATTCGAGAGCAGCATCCAACCAAAATCCCGGTGATAATAG TATTCGAGAGCAGCATCCAACAAAAATCCCGGTGATAATAG < 41bp 0.584789776110416 0.807460356776598 0.14433712 0.20924452 prediction 0.445341161332363 Functional Gain - MAP1LC3B2 ENSG00000171471 CDS Human other chr12:117013833 chr12:117013834 synonymous SNV . 0 22 hm5C_associated_SNPs_118468 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:117013825-117013853
64251 chr12 113704076 113704076 1 + T C LIHC 113704074 + 113704054 113704094 41 GCACACAATCACCTCTTCTACCTGATGGAGCTGGCCACGGC GCACACAATCACCTCTTCTACCCGATGGAGCTGGCCACGGC < 41bp 0.619893939103982 0.842560362964853 0.10087341 0.08966231 prediction 0.445332847721741 Functional Gain - TPCN1 ENSG00000186815 CDS Human protein_coding chr12:113704074 chr12:113704076 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_118470 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr12:113704054-113704077
64251 chr1 220267601 220267601 1 + C G BLCA 220267600 + 220267580 220267620 41 CGCGGGCCGGGCGCGGCCGCCCTGGCCACTGCCCGAAGTTT CGCGGGCCGGGCGCGGCCGCCGTGGCCACTGCCCGAAGTTT < 41bp 0.41804788625891 0.722661385454795 0.37549976 0.88519394 prediction 0.44532277090959 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220267600 chr1:220267601 nonsynonymous SNV 0.087 0 22 hm5C_associated_SNPs_118473 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:220267600-220267620
64251 chr1 230415372 230415372 1 + A G rs146911682 230415369 + 230415349 230415389 41 GGCACGGACGACTGTGCAGACACAGCAGCGGCAAGAAGCGA GGCACGGACGACTGTGCAGACACGGCAGCGGCAAGAAGCGA < 41bp 0.535972641571885 0.758632774193296 0.043824315 0.11204678 prediction 0.445320265242822 Functional Gain - GALNT2 ENSG00000143641 UTR3 Human protein_coding chr1:230415369 chr1:230415372 . . 0 24 hm5C_associated_SNPs_118475 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:230415300-230415400
64251 chr15 99675469 99675469 1 + C A rs117635910 99675465 + 99675445 99675485 41 GTTGGTTGCTAAATGTGAATCACGCGGGAGTGAGTGTGCCC GTTGGTTGCTAAATGTGAATCACGAGGGAGTGAGTGTGCCC < 41bp 0.39235608314011 0.722649019585071 0.18586361 0.6073328 prediction 0.445298039170142 Functional Gain - SYNM ENSG00000182253 UTR3 Human protein_coding chr15:99675465 chr15:99675469 . . 0 25 hm5C_associated_SNPs_118476 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:99675465-99675485
64251 chr16 84695301 84695301 1 + C G rs73259550 84695297 + 84695277 84695317 41 GCTATGCTACGACCACCGGACAGACGTGTGGGAGGAGCGGC GCTATGCTACGACCACCGGACAGAGGTGTGGGAGGAGCGGC < 41bp 0.442212650573025 0.722643502446986 0.34051466 0.8199631 prediction 0.445287004893972 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695297 chr16:84695301 nonsynonymous SNV 0.981 2 25 hm5C_associated_SNPs_118478 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr16:84695287-84695308
64251 chr5 140476417 140476417 1 + C A LUAD 140476416 + 140476396 140476436 41 GCTCCCGGAGGCGGCACCGGCCCAGGCCCAGGCCGACTTGC GCTCCCGGAGGCGGCACCGGCACAGGCCCAGGCCGACTTGC < 41bp 0.584834200765322 0.807473384019118 0.70032173 0.8473662 prediction 0.445278366507593 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476416 chr5:140476417 synonymous SNV . 0 22 hm5C_associated_SNPs_118481 0 0 1 SND1 POSTAR2 ENCODE chr5:140476365-140476432
64251 chr22 50655815 50655815 1 + C T rs139913333 50655814 + 50655794 50655834 41 CGTAACGGCCTCGGCACGCTCCACACCCCTGGAGTCTCCCG CGTAACGGCCTCGGCACGCTCTACACCCCTGGAGTCTCCCG < 41bp 0.522639557844593 0.745274559398725 0.065033674 0.37252167 prediction 0.445270003108265 Functional Gain - SELENOO ENSG00000073169 UTR3 Human protein_coding chr22:50655814 chr22:50655815 . . 0 22 hm5C_associated_SNPs_118483 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:50655777-50655815
64251 chr2 238657878 238657878 1 + C A LUAD 238657874 + 238657854 238657894 41 ATGCCGGGCCTGTCTGCAGCCACGCTGGCCTCTCTGGGTGG ATGCCGGGCCTGTCTGCAGCCACGATGGCCTCTCTGGGTGG < 41bp 0.714945697956683 0.937578028976286 0.18661976 0.45575097 prediction 0.445264662039206 Functional Gain - LRRFIP1 ENSG00000124831 CDS Human protein_coding chr2:238657874 chr2:238657878 nonsynonymous SNV 0.554 4 25 hm5C_associated_SNPs_118484 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr2:238657860-238657880
64251 chr5 179264819 179264819 1 + C G BLCA 179264815 + 179264795 179264835 41 CCCTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGG CCCTCAGCTCCCCGGCACTGCAGTGTGCAGAGTTCTCCTGG < 41bp 0.451742604667146 0.722630125745291 0.096200824 0.10623589 prediction 0.445260251490583 Functional Gain - MRNIP ENSG00000161010 CDS Human protein_coding chr5:179264815 chr5:179264819 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_118485 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:179264799-179264821
64251 chr6 43126654 43126654 1 + C T GBM 43126653 + 43126633 43126673 41 CGTAACTGCCTGGTCAGTGCCCAGAGACAAGTGAAGGTGTC CGTAACTGCCTGGTCAGTGCCTAGAGACAAGTGAAGGTGTC < 41bp 0.459084510965132 0.722622230148148 0.38512176 0.28182915 prediction 0.445244460296296 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43126653 chr6:43126654 stopgain 1.000 1 22 hm5C_associated_SNPs_118487 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:43126616-43126660
64251 chr7 100467998 100467998 1 + C T LUSC 100467997 + 100467977 100468017 41 ATTCCCACCTTCCAGGTGCCCCTGAGCCAGCCTCCAGAGGA ATTCCCACCTTCCAGGTGCCCTTGAGCCAGCCTCCAGAGGA < 41bp 0.471269820491509 0.722620915031896 0.11487281 0.106610954 prediction 0.445241830063792 Functional Gain - TRIP6 ENSG00000087077 CDS Human protein_coding chr7:100467997 chr7:100467998 synonymous SNV . 0 22 hm5C_associated_SNPs_118488 0 0 7 U2AF2 POSTAR2 GSE83923,CSM2221661 chr7:100467980-100468000
64251 chr11 70208222 70208222 1 + C T SKCM 70208221 + 70208201 70208241 41 GCATGAATTGCTGGAGGAAGCCCGGAGACAAGGTTTACCTT GCATGAATTGCTGGAGGAAGCTCGGAGACAAGGTTTACCTT < 41bp 0.554714119460526 0.777331441631506 0.8690834 0.77894807 prediction 0.445234644341961 Functional Gain - PPFIA1 ENSG00000131626 CDS Human protein_coding chr11:70208221 chr11:70208222 synonymous SNV . 0 22 hm5C_associated_SNPs_118491 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:70208196-70208224
64251 chr1 229431628 229431628 1 + C T UCEC 229431627 + 229431607 229431647 41 AAGTTATTACCGAGGCGCGGCCGGGGCTCTCCTCGTCTATG AAGTTATTACCGAGGCGCGGCTGGGGCTCTCCTCGTCTATG < 41bp 0.538275866268564 0.760882929230639 0.9177697 0.87195027 prediction 0.445214125924152 Functional Gain - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229431627 chr1:229431628 synonymous SNV . 0 22 hm5C_associated_SNPs_118493 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr1:229431604-229431657
64251 chr11 75282973 75282973 1 + C T LGG 75282972 + 75282952 75282992 41 ACAGATGGCAACCCCTTTGACCAGGACATCTACGGGCGCGA ACAGATGGCAACCCCTTTGACTAGGACATCTACGGGCGCGA < 41bp 0.481073431025884 0.722601229121332 0.65203977 0.25522113 prediction 0.445202458242664 Functional Gain - SERPINH1 ENSG00000149257 CDS Human protein_coding chr11:75282972 chr11:75282973 stopgain 1.000 0 22 hm5C_associated_SNPs_118494 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:75282945-75282975
64251 chr16 1837746 1837746 1 + C T SKCM 1837745 + 1837725 1837765 41 TACCTGGTGGTGGACACGCCCCCGGGGACCTCCGATGAGCA TACCTGGTGGTGGACACGCCCTCGGGGACCTCCGATGAGCA < 41bp 0.587474725821773 0.810074692409733 0.30655804 0.06959325 prediction 0.445199933175921 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1837745 chr16:1837746 nonsynonymous SNV 0.088 4 22 hm5C_associated_SNPs_118495 0 0 6 DDX24 POSTAR2 ENCODE chr16:1837691-1837750
64251 chr1 64936540 64936540 1 + A G LUSC 64936537 + 64936517 64936557 41 CCTGGGCGCCGGGGCCGAAGCCGACTTCTCCATCCTGGACG CCTGGGCGCCGGGGCCGAAGCCGGCTTCTCCATCCTGGACG < 41bp 0.572067215008448 0.794663597398112 0.10930008 0.84926313 prediction 0.445192764779327 Functional Gain - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:64936537 chr1:64936540 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_118497 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:64936510-64936554
64251 chr10 103900329 103900329 1 + C T LUSC 103900328 + 103900308 103900348 41 TGACCCAGTGCTAGTTAAGTCCAGACCAACTGATCCCAGAC TGACCCAGTGCTAGTTAAGTCTAGACCAACTGATCCCAGAC < 41bp 0.552990889037097 0.775573518964565 0.57137305 0.5119933 prediction 0.445165259854936 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103900328 chr10:103900329 synonymous SNV . 0 22 hm5C_associated_SNPs_118505 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:103900180-103900336
64251 chr20 17550613 17550613 1 + C G rs560313690 17550612 + 17550592 17550632 41 CAGATGAGGGAAGCTCCCCTCCGAGACTCTGGATAGCCGCC CAGATGAGGGAAGCTCCCCTCGGAGACTCTGGATAGCCGCC < 41bp 0.647376165046629 0.869956242394557 0.88446814 0.9355519 prediction 0.445160154695855 Functional Gain - DSTN ENSG00000125868 UTR5 Human protein_coding chr20:17550612 chr20:17550613 . . 0 22 hm5C_associated_SNPs_118506 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:17550605-17550641
64251 chr1 155851195 155851195 1 + C T PAAD 155851194 + 155851174 155851214 41 GAGGTGGTGGGGAGGCTGATCCTGGGGGCACACAGTGTCAC GAGGTGGTGGGGAGGCTGATCTTGGGGGCACACAGTGTCAC < 41bp 0.556573616584088 0.779151901200098 0.8673577 0.44438708 prediction 0.44515656923202 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155851194 chr1:155851195 synonymous SNV . 0 22 hm5C_associated_SNPs_118507 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:155851174-155851195
64251 chr14 39650316 39650316 1 + C T LUAD 39650315 + 39650295 39650335 41 AAGAAGAAAAAGAATCTGAGCCCCAACCTGAGCCTGTGGCT AAGAAGAAAAAGAATCTGAGCTCCAACCTGAGCCTGTGGCT < 41bp 0.463561272645494 0.722572525245333 0.081534505 0.38621876 prediction 0.445145050490666 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650315 chr14:39650316 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_118510 0 0 27 HNRNPC POSTAR2 GSE56010,GSM1350197 chr14:39650243-39650335
64251 chr11 58891901 58891901 1 + C T HNSC 58891900 + 58891880 58891920 41 AGCGAGAGTATCTACTCAGCCCTGAGTGCTAATGACTATTT AGCGAGAGTATCTACTCAGCCTTGAGTGCTAATGACTATTT < 41bp 0.488495057605728 0.722565592735177 0.0067144334 0.0052163005 prediction 0.445131185470354 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58891900 chr11:58891901 synonymous SNV . 0 22 hm5C_associated_SNPs_118516 0 0 1 EWSR1 POSTAR2 SRX029344 chr11:58891887-58891912
64251 chr9 34252127 34252127 1 + T C rs1049567 34252125 + 34252105 34252145 41 CTTTTCTGCCAGGCAGTCACCATGCTTCCCTACCCCAGCCT CTTTTCTGCCAGGCAGTCACCACGCTTCCCTACCCCAGCCT < 41bp 0.497321725250998 0.722562938509652 0.34136304 0.55628073 prediction 0.445125877019303 Functional Gain - UBAP1 ENSG00000165006 UTR3 Human protein_coding chr9:34252125 chr9:34252127 . . 0 23 hm5C_associated_SNPs_118518 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr9:34252122-34252161
64251 chr1 46743949 46743949 1 + C T rs149441991 46743948 + 46743928 46743968 41 CATGAGGAGCAGCGGGGCCTCCGCTGATAACCAGCTGGTCT CATGAGGAGCAGCGGGGCCTCTGCTGATAACCAGCTGGTCT < 41bp 0.512808358927665 0.73536303494606 0.4834574 0.60179085 prediction 0.445109352036789 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46743948 chr1:46743949 nonsynonymous SNV 0.233 2 22 hm5C_associated_SNPs_118520 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:46743945-46743971
64251 chr1 2235378 2235378 1 + C G rs140889128 2235374 + 2235354 2235394 41 TGTGAGCAGCCCTCCGTGTGCCGCCGCCGTCTCCCGGGCCC TGTGAGCAGCCCTCCGTGTGCCGCGGCCGTCTCCCGGGCCC < 41bp 0.418850575421262 0.722548980588222 0.5164757 0.8319492 prediction 0.445097961176444 Functional Gain - SKI ENSG00000157933 CDS Human protein_coding chr1:2235374 chr1:2235378 synonymous SNV . 0 25 hm5C_associated_SNPs_118525 2 0 1 FXR2 POSTAR2 ENCODE chr1:2235361-2235398
64251 chr5 139781608 139781608 1 + T G COAD 139781605 + 139781585 139781625 41 CTTTGAGGAGGACCTGGACTCTGTGGCTCCGCGATCCGCCC CTTTGAGGAGGACCTGGACTCTGGGGCTCCGCGATCCGCCC < 41bp 0.69619355570547 0.918735923083188 0.38871965 0.9054862 prediction 0.445084734755435 Functional Gain - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139781605 chr5:139781608 nonsynonymous SNV 0.966 4 24 hm5C_associated_SNPs_118528 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr5:139781594-139781615
64251 chr2 36668566 36668566 1 + C T STAD 36668565 + 36668545 36668585 41 GTCTGCGCAAAGTCTGCCAGCCGGGAAACCTGAACATACTA GTCTGCGCAAAGTCTGCCAGCTGGGAAACCTGAACATACTA < 41bp 0.47758613082859 0.722539891032986 0.8782594 0.2408883 prediction 0.445079782065972 Functional Gain - CRIM1 ENSG00000150938 CDS Human protein_coding chr2:36668565 chr2:36668566 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_118530 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:36668560-36668585
64251 chr1 65157073 65157073 1 + C T rs544222989 65157072 + 65157052 65157092 41 CAACAATGACCCCTTGTCAGCCGGGGTCGATGTGGGAAACC CAACAATGACCCCTTGTCAGCTGGGGTCGATGTGGGAAACC < 41bp 0.532863925626309 0.75540216605927 0.9277272 0.80782604 prediction 0.445076480865923 Functional Gain - CACHD1 ENSG00000158966 CDS Human protein_coding chr1:65157072 chr1:65157073 synonymous SNV . 0 22 hm5C_associated_SNPs_118534 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:65157060-65157080
64251 chr13 113540351 113540351 1 + C A rs112027937 113540347 + 113540327 113540367 41 CCACAGCAGGACTGGCCACACCCACGCCGCACCTCATCCGT CCACAGCAGGACTGGCCACACCCAAGCCGCACCTCATCCGT < 41bp 0.377195966494616 0.722537941285589 0.051863074 0.1713754 prediction 0.445075882571177 Functional Gain - ATP11A ENSG00000068650 UTR3 Human protein_coding chr13:113540347 chr13:113540351 . . 0 25 hm5C_associated_SNPs_118536 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr13:113540332-113540380
64251 chr12 32884397 32884397 1 + T G OV 32884395 + 32884375 32884415 41 TCCGCTGTGTGGAACTGGTTCATGAGGAAATGCAAAGGATC TCCGCTGTGTGGAACTGGTTCAGGAGGAAATGCAAAGGATC < 41bp 0.671421303205935 0.893957740132636 0.34231678 0.8975416 prediction 0.445072873853403 Functional Gain - DNM1L ENSG00000087470 CDS Human protein_coding chr12:32884395 chr12:32884397 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_118537 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:32884354-32884401
64251 chr3 120315216 120315216 1 + C T OV 120315215 + 120315195 120315235 41 TGGTTCGCCAAGATGTCGTTCCCAAAGTATAAGCCGTCGAG TGGTTCGCCAAGATGTCGTTCTCAAAGTATAAGCCGTCGAG < 41bp 0.517063362173686 0.739584816933475 0.17613935 0.14773151 prediction 0.445042909519579 Functional Gain - NDUFB4 ENSG00000065518 CDS Human protein_coding chr3:120315215 chr3:120315216 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_118541 0 0 21 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:120315180-120315220
64251 chr10 75535364 75535364 1 + T C LIHC 75535362 + 75535342 75535382 41 CAGGGGGAAGCTCTCACTGCCATGATCCACAACAATGAAAC CAGGGGGAAGCTCTCACTGCCACGATCCACAACAATGAAAC < 41bp 0.45883548382956 0.722510038559218 0.24678925 0.13667524 prediction 0.445020077118436 Functional Gain - FUT11 ENSG00000196968 CDS Human protein_coding chr10:75535362 chr10:75535364 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_118547 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:75535325-75535370
64251 chr11 126146410 126146410 1 + C A COAD 126146409 + 126146389 126146429 41 AACTACCTAGGTGGTCGTAGCCCCACTGAGGTAAGCTGAGT AACTACCTAGGTGGTCGTAGCACCACTGAGGTAAGCTGAGT < 41bp 0.465818299895212 0.722508729417155 0.21665761 0.25873643 prediction 0.44501745883431 Functional Gain - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146409 chr11:126146410 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_118548 0 0 12 AKAP8L POSTAR2 ENCODE chr11:126146375-126146424
64251 chr1 36788023 36788023 1 + C A rs200217271 36788022 + 36788002 36788042 41 ATCCGTTCGCGCTCCTCCAGCCGCTGCGCCCGCTCCAGCTC ATCCGTTCGCGCTCCTCCAGCAGCTGCGCCCGCTCCAGCTC < 41bp 0.469115325516969 0.72250354169754 0.258933 0.92201054 prediction 0.445007083395081 Functional Gain - EVA1B ENSG00000142694 CDS Human protein_coding chr1:36788022 chr1:36788023 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_118551 0 0 1 SLTM POSTAR2 ENCODE chr1:36788023-36788053
64251 chr12 53575775 53575775 1 + A G UCEC 53575772 + 53575752 53575792 41 TAAGTGAGAAATCAGCATGGCTCAGGTAAAAAGCTCTAGAG TAAGTGAGAAATCAGCATGGCTCGGGTAAAAAGCTCTAGAG < 41bp 0.508804552259082 0.731303118891476 0.44917777 0.5448299 prediction 0.444997133264788 Functional Gain - ZNF740 ENSG00000139651 CDS Human protein_coding chr12:53575772 chr12:53575775 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_118552 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:53575737-53575795
64251 chr20 31022480 31022480 1 + C T rs79865730 31022479 + 31022459 31022499 41 TGGAGGTGGCGGCGGGGCCACCGATGAGGGAGGTGGCAGAG TGGAGGTGGCGGCGGGGCCACTGATGAGGGAGGTGGCAGAG < 41bp 0.516413087597017 0.738909045735025 0.44982123 0.5299369 prediction 0.444991916276017 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31022479 chr20:31022480 synonymous SNV . 0 22 hm5C_associated_SNPs_118555 1 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:31022480-31022500
64251 chrX 47034426 47034426 1 + C T SKCM 47034425 + 47034405 47034445 41 ATGCTGTCTCCAGGTCAGAGCCGGGGCTTCGCCTTCGTCGA ATGCTGTCTCCAGGTCAGAGCTGGGGCTTCGCCTTCGTCGA < 41bp 0.516216219593425 0.738708523017799 0.942828 0.7856802 prediction 0.444984606848748 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47034425 chrX:47034426 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118557 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:47034396-47034434
64251 chr2 177016750 177016750 1 + C A LUSC 177016746 + 177016726 177016766 41 CCTCCGGGACGGCACTCAAGCAGCCGGCCGTGGTCTACCCC CCTCCGGGACGGCACTCAAGCAGCAGGCCGTGGTCTACCCC < 41bp 0.710011053272558 0.932500309256506 0.82099366 0.72852725 prediction 0.444978511967898 Functional Gain - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177016746 chr2:177016750 nonsynonymous SNV 0.637 4 25 hm5C_associated_SNPs_118560 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:177016740-177016760
64251 chr12 51213476 51213476 1 + C T UCEC 51213475 + 51213455 51213495 41 TATGTGAAATGCCTGGAAAACCGAGTTGCAGTCCTGGAAAA TATGTGAAATGCCTGGAAAACTGAGTTGCAGTCCTGGAAAA < 41bp 0.515173778811184 0.737652015089152 0.31864843 0.3007471 prediction 0.444956472555935 Functional Gain - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51213475 chr12:51213476 stopgain 0.995 1 22 hm5C_associated_SNPs_118566 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr12:51213448-51213477
64251 chr2 173429750 173429750 1 + A G COAD 173429747 + 173429727 173429767 41 GCAAAGGAAGTCCATCTCATCGAAAACACATTGGAAGCATA GCAAAGGAAGTCCATCTCATCGAGAACACATTGGAAGCATA < 41bp 0.502594682332661 0.725055091008766 0.13905549 0.33425653 prediction 0.44492081735221 Functional Gain - PDK1 ENSG00000152256 CDS Human protein_coding chr2:173429747 chr2:173429750 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_118577 0 0 7 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr2:173429736-173429778
64251 chr16 14755803 14755803 1 + A G UCEC 14755800 + 14755780 14755820 41 TATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTAC TATACGCCCTCAAGAGCTCCCCCGGGCTGAGTCTGCTCTAC < 41bp 0.479534966077282 0.722454857981015 0.11079261 0.110637486 prediction 0.444909715962031 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14755800 chr16:14755803 nonsynonymous SNV 0.180 4 24 hm5C_associated_SNPs_118579 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr16:14755778-14755804
64251 chr16 28885108 28885108 1 + C G rs148378470 28885107 + 28885087 28885127 41 TGGAGAGGAAGGGGGCCACCCCAGGGCCATTAACAACCAGT TGGAGAGGAAGGGGGCCACCCGAGGGCCATTAACAACCAGT < 41bp 0.646203460979765 0.86864911190662 0.89683765 0.9163841 prediction 0.444891301853709 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28885107 chr16:28885108 synonymous SNV . 0 22 hm5C_associated_SNPs_118583 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:28885091-28885126
64251 chr11 117052656 117052656 1 + C T rs145349618 117052655 + 117052635 117052675 41 GTCAACACCACATACCAGCTCCGGGTCAGCCGCATGGACGA GTCAACACCACATACCAGCTCTGGGTCAGCCGCATGGACGA < 41bp 0.571547536503582 0.793992342584198 0.36081186 0.23213837 prediction 0.444889612161231 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117052655 chr11:117052656 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_118584 0 0 1 PPIG POSTAR2 ENCODE chr11:117052603-117052680
64251 chr3 47454615 47454615 1 + C T SKCM 47454614 + 47454594 47454634 41 CGGGCAAGGGCTGCGGGCCACCCGGCCCTCTGACGACCCCC CGGGCAAGGGCTGCGGGCCACTCGGCCCTCTGACGACCCCC < 41bp 0.557568243474616 0.780011471565927 0.3395338 0.69074976 prediction 0.444886456182623 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47454614 chr3:47454615 synonymous SNV . 0 22 hm5C_associated_SNPs_118586 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr3:47454593-47454631
64251 chr3 25833400 25833400 1 + C T UCEC 25833399 + 25833379 25833419 41 CATGCTGTTCAAAGAAGAGCCCGGATCTATGCAGAAGTTTT CATGCTGTTCAAAGAAGAGCCTGGATCTATGCAGAAGTTTT < 41bp 0.555206054153237 0.777646989598399 0.17887598 0.16410023 prediction 0.444881870890324 Functional Gain - OXSM ENSG00000151093 CDS Human protein_coding chr3:25833399 chr3:25833400 nonsynonymous SNV 0.272 3 22 hm5C_associated_SNPs_118587 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:25833393-25833409
64251 chr15 51285806 51285806 1 + A G PCPG 51285803 + 51285783 51285823 41 ATTATTTGTTGGTCTAGGATCAGAAAGTACAATCAACCTGG ATTATTTGTTGGTCTAGGATCAGGAAGTACAATCAACCTGG < 41bp 0.551958528242835 0.774379746586168 0.22203007 0.69741875 prediction 0.444842436686666 Functional Gain - AP4E1 ENSG00000081014 CDS Human protein_coding chr15:51285803 chr15:51285806 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_118589 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:51285791-51285812
64251 chr5 40854284 40854284 1 + C T SKCM 40854283 + 40854263 40854303 41 ATCCGATCAGTCCAACCCATCCACAGTCAAACACTCCCAGC ATCCGATCAGTCCAACCCATCTACAGTCAAACACTCCCAGC < 41bp 0.559644298731064 0.78206486186062 0.018135726 0.14152777 prediction 0.44484112625911 Functional Gain - CARD6 ENSG00000132357 CDS Human protein_coding chr5:40854283 chr5:40854284 synonymous SNV . 0 22 hm5C_associated_SNPs_118590 0 0 1 DGCR8 POSTAR2 ENCODE chr5:40854251-40854285
64251 chr16 30094725 30094725 1 + C T SKCM 30094724 + 30094704 30094744 41 GCCACCCCCAGGTTCGCTATCCTGATCGCATCACACTGATC GCCACCCCCAGGTTCGCTATCTTGATCGCATCACACTGATC < 41bp 0.594793995885493 0.817203440257262 0.7587606 0.40155828 prediction 0.444818888743539 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30094724 chr16:30094725 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_118596 0 0 14 RTCB POSTAR2 GSE38201,GSM936508 chr16:30094699-30094729
64251 chr16 20788733 20788733 1 + A G LUSC 20788730 + 20788710 20788750 41 CAGGAACCACTCAGCTGACCCAGAAAGACATTCTCTACAGA CAGGAACCACTCAGCTGACCCAGGAAGACATTCTCTACAGA < 41bp 0.500846029739288 0.723253130292037 0.34225607 0.7887581 prediction 0.444814201105496 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20788730 chr16:20788733 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_118597 0 0 8 FXR1 POSTAR2 ENCODE chr16:20788695-20788778
64251 chr19 42797159 42797159 1 + C G rs189391255 42797158 + 42797138 42797178 41 CCAAGGCCCAGCGGCCCAGCCCGAAGGCCCCCCAGAAAGTG CCAAGGCCCAGCGGCCCAGCCGGAAGGCCCCCCAGAAAGTG < 41bp 0.396648190400551 0.722403095050097 0.29141843 0.5090969 prediction 0.444806190100195 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42797158 chr19:42797159 nonsynonymous SNV 0.753 4 22 hm5C_associated_SNPs_118599 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:42797119-42797159
64251 chr9 135865147 135865147 1 + C T HNSC 135865146 + 135865126 135865166 41 CAGGAGCGCAGCTTCGAGTGCCGCATGTGCGGCAAGGCCTT CAGGAGCGCAGCTTCGAGTGCTGCATGTGCGGCAAGGCCTT < 41bp 0.578557458739609 0.800959109033921 0.28003386 0.22736132 prediction 0.444803300588625 Functional Gain - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135865146 chr9:135865147 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_118600 0 0 1 RPS3 POSTAR2 ENCODE chr9:135865118-135865149
64251 chr9 15453116 15453116 1 + T C UCEC 15453114 + 15453094 15453134 41 GCTAGAATGGAAGATTTCACCTTCAATGACTTGTGTATTAA GCTAGAATGGAAGATTTCACCTCCAATGACTTGTGTATTAA < 41bp 0.651176941057431 0.873574541434036 0.35679165 0.96429014 prediction 0.44479520075321 Functional Gain - SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15453114 chr9:15453116 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_118602 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:15453103-15453128
64251 chr5 236660 236660 1 + C T LUSC 236659 + 236639 236679 41 GGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGC GGGGCAAACTCGCTCTTGGACTTGGTTGTCTTTGGTCGGGC < 41bp 0.466264613163715 0.722392508236944 0.17586029 0.15426871 prediction 0.444785016473887 Functional Gain - SDHA ENSG00000073578 CDS Human protein_coding chr5:236659 chr5:236660 synonymous SNV . 0 22 hm5C_associated_SNPs_118605 0 0 17 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:236640-236660
64251 chr3 122821618 122821618 1 + A G UVM 122821615 + 122821595 122821635 41 CAGGGATGGTGCATTTCATACTGAATATAACCGAGCTGTGA CAGGGATGGTGCATTTCATACTGGATATAACCGAGCTGTGA < 41bp 0.529705021968198 0.752092705550639 0.20440012 0.2737248 prediction 0.444775367164882 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122821615 chr3:122821618 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_118606 0 0 9 EFTUD2 POSTAR2 ENCODE chr3:122821601-122821707
64251 chr12 8926115 8926115 1 + T C UCEC 8926113 + 8926093 8926133 41 AATCTAGATGTAGCTGGTATCATAGCAGACTATGCCGCCTC AATCTAGATGTAGCTGGTATCACAGCAGACTATGCCGCCTC < 41bp 0.598857505000918 0.821234503125349 0.90940535 0.9075463 prediction 0.444753996248863 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926113 chr12:8926115 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_118609 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:8926087-8926115
64251 chr10 73767332 73767332 1 + C T PAAD 73767331 + 73767311 73767351 41 CGAGCCGGGGGGCGCCAACGCCGCGGGCTCGGCCCTGGTGT CGAGCCGGGGGGCGCCAACGCTGCGGGCTCGGCCCTGGTGT < 41bp 0.517382636215797 0.739751201609445 0.8986275 0.74670714 prediction 0.444737130787294 Functional Gain - CHST3 ENSG00000122863 CDS Human protein_coding chr10:73767331 chr10:73767332 synonymous SNV . 0 22 hm5C_associated_SNPs_118614 4 0 1 SND1 POSTAR2 ENCODE chr10:73767295-73767348
64251 chr12 57920981 57920981 1 + C T rs374013830 57920980 + 57920960 57921000 41 TCTGCGCTGCTGGCTGCCACCCTGGATCCCCCCTCGGGGAC TCTGCGCTGCTGGCTGCCACCTTGGATCCCCCCTCGGGGAC < 41bp 0.46606751541649 0.722351674429244 0.14529198 0.11831629 prediction 0.444703348858488 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57920980 chr12:57920981 synonymous SNV . 0 22 hm5C_associated_SNPs_118618 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:57920954-57920983
64251 chr12 94654614 94654614 1 + C T STAD 94654613 + 94654593 94654633 41 GTCTGCCTTTCTGGATTTCTCCGGGTAAGTGTCACATCCCT GTCTGCCTTTCTGGATTTCTCTGGGTAAGTGTCACATCCCT < 41bp 0.535312783935563 0.757663323057701 0.94891214 0.9321339 prediction 0.444701078244275 Functional Gain - PLXNC1 ENSG00000136040 CDS Human protein_coding chr12:94654613 chr12:94654614 nonsynonymous SNV 0.519 4 22 hm5C_associated_SNPs_118619 0 0 1 PRPF8 POSTAR2 ENCODE chr12:94654602-94654651
64251 chr3 51708535 51708535 1 + C A OV 51708534 + 51708514 51708554 41 CTGAGAGCTGCAGCATCTCTCCCAAGCTCCGCTCCATCGCT CTGAGAGCTGCAGCATCTCTCACAAGCTCCGCTCCATCGCT < 41bp 0.582502841840794 0.804852782093699 0.35135162 0.56836706 prediction 0.44469988050581 Functional Gain - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51708534 chr3:51708535 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_118620 0 0 3 FUS POSTAR2 DRA001158,DRS012384 chr3:51708518-51708566
64251 chr2 85769750 85769750 1 + T C STAD 85769748 + 85769728 85769768 41 CTTATGGCGGTTGGGGTGCTCATGGAGGAGGTGCCTTTTCA CTTATGGCGGTTGGGGTGCTCACGGAGGAGGTGCCTTTTCA < 41bp 0.626980282435669 0.849325704940989 0.8636502 0.90186685 prediction 0.444690845010639 Functional Gain - MAT2A ENSG00000168906 CDS Human protein_coding chr2:85769748 chr2:85769750 synonymous SNV . 0 23 hm5C_associated_SNPs_118623 1 0 22 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:85769711-85769790
64251 chrX 153609423 153609423 1 + C T LUAD 153609422 + 153609402 153609442 41 CGTGCCATCCGGCCTGAAAACCGTGCTCCTGGGGCTGGGCT CGTGCCATCCGGCCTGAAAACTGTGCTCCTGGGGCTGGGCT < 41bp 0.526660833610202 0.74900267387381 0.33883545 0.25638318 prediction 0.444683680527217 Functional Gain - EMD ENSG00000102119 CDS Human protein_coding chrX:153609422 chrX:153609423 nonsynonymous SNV 0.977 2 22 hm5C_associated_SNPs_118625 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153609417-153609456
64251 chr6 149699405 149699405 1 + T C BRCA 149699402 + 149699382 149699422 41 CAACTTCAAGGTGGCCAGTCCAATAGTGAACTATTTCAGCA CAACTTCAAGGTGGCCAGTCCAACAGTGAACTATTTCAGCA < 41bp 0.501696174570969 0.724024738229805 0.13884678 0.120104134 prediction 0.444657127317671 Functional Gain - TAB2 ENSG00000055208 CDS Human protein_coding chr6:149699402 chr6:149699405 synonymous SNV . 0 24 hm5C_associated_SNPs_118629 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:149699268-149699434
64251 chr19 54966555 54966555 1 + C T SKCM 54966554 + 54966534 54966574 41 CTCCCGCAGCGGGTCCTCTGCCCGGGGGAACCTGTCTGGGA CTCCCGCAGCGGGTCCTCTGCTCGGGGGAACCTGTCTGGGA < 41bp 0.584819563939411 0.807148021730168 0.8939363 0.33132565 prediction 0.444656915581514 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54966554 chr19:54966555 synonymous SNV . 0 22 hm5C_associated_SNPs_118630 0 0 9 BUD13 POSTAR2 ENCODE chr19:54966542-54966566
64251 chr22 44332968 44332968 1 + C T LUAD 44332967 + 44332947 44332987 41 CCAGCCAGGCCTGAAGTCATCCTCAGAAGGGATGGATCCTG CCAGCCAGGCCTGAAGTCATCTTCAGAAGGGATGGATCCTG < 41bp 0.468240017734926 0.722321393082271 0.10112065 0.757998 prediction 0.444642786164543 Functional Gain - PNPLA3 ENSG00000100344 CDS Human protein_coding chr22:44332967 chr22:44332968 synonymous SNV . 0 22 hm5C_associated_SNPs_118632 0 0 4 GRWD1 POSTAR2 ENCODE chr22:44332964-44333013
64251 chr2 121746795 121746795 1 + C T UCEC 121746794 + 121746774 121746814 41 ACAACCCCAGACTACCCAGCCCGGGGCTGCACGGCCAGCGC ACAACCCCAGACTACCCAGCCTGGGGCTGCACGGCCAGCGC < 41bp 0.519075496562356 0.741385213578525 0.3934705 0.32716537 prediction 0.44461943403234 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121746794 chr2:121746795 nonsynonymous SNV 0.247 4 22 hm5C_associated_SNPs_118638 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:121746765-121746795
64251 chr21 37445098 37445098 1 + C A UCEC 37445097 + 37445077 37445117 41 CAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTTTTG CAGAAGAAGGTGCAGAGACCCATGTGTACTTGGCCCTTTTG < 41bp 0.58182283429718 0.804124409422752 0.20957708 0.39773148 prediction 0.444603150251145 Functional Gain - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37445097 chr21:37445098 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_118644 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr21:37445080-37445180
64251 chr18 72999575 72999575 1 + C T TGCT 72999574 + 72999554 72999594 41 GGATCATCATGGACCACTCACCGGAGCCTTCCTTCATCAAC GGATCATCATGGACCACTCACTGGAGCCTTCCTTCATCAAC < 41bp 0.573525679996618 0.795824878340695 0.31844598 0.03939432 prediction 0.444598396688154 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999574 chr18:72999575 nonsynonymous SNV 0.216 4 22 hm5C_associated_SNPs_118645 1 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr18:72999528-72999596
64251 chr16 29831039 29831039 1 + C A BLCA 29831038 + 29831018 29831058 41 CAGCCCCCCACTCCGATCCTCCGGGAGTAGTCTCTTCCCTC CAGCCCCCCACTCCGATCCTCAGGGAGTAGTCTCTTCCCTC < 41bp 0.598518757849763 0.820817011224962 0.5784905 0.9224807 prediction 0.444596506750396 Functional Gain - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29831038 chr16:29831039 synonymous SNV . 0 22 hm5C_associated_SNPs_118646 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29830946-29831044
64251 chr1 212988383 212988383 1 + T G rs116192831 212988380 + 212988360 212988400 41 GAATGAGCCCTGGAACATTTCTATTTCAGCAGAATATATTG GAATGAGCCCTGGAACATTTCTAGTTCAGCAGAATATATTG < 41bp 0.341488803166959 0.722290248737182 0.18719158 0.2983142 prediction 0.444580497474363 Functional Gain - TATDN3 ENSG00000203705 CDS Human protein_coding chr1:212988380 chr1:212988383 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_118648 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:212988352-212988386
64251 chr11 85975253 85975253 1 + T C SKCM 85975250 + 85975230 85975270 41 ATGGAATATCCAGACGGACACTCTGGTGGCAATATTTGGAG ATGGAATATCCAGACGGACACTCCGGTGGCAATATTTGGAG < 41bp 0.5423718847828 0.764660381861222 0.12840009 0.17171457 prediction 0.444576994156844 Functional Gain - EED ENSG00000074266 CDS Human protein_coding chr11:85975250 chr11:85975253 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_118650 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:85975216-85975259
64251 chr18 8376103 8376103 1 + T C UCEC 8376101 + 8376081 8376121 41 ACTTCACTGGCTGGCCGGATCATGGGGTCCCCTACCATGCC ACTTCACTGGCTGGCCGGATCACGGGGTCCCCTACCATGCC < 41bp 0.531720543304294 0.7539849306683 0.9177079 0.9271678 prediction 0.444528774728012 Functional Gain - PTPRM ENSG00000173482 CDS Human protein_coding chr18:8376101 chr18:8376103 synonymous SNV . 0 23 hm5C_associated_SNPs_118657 0 0 1 PPIG POSTAR2 ENCODE chr18:8376074-8376130
64251 chr17 74561272 74561272 1 + C A rs113545132 74561271 + 74561251 74561291 41 GTGAAGACCCCCCTCCTCCCCCCCAGCTGCTGCCTTGCACA GTGAAGACCCCCCTCCTCCCCACCAGCTGCTGCCTTGCACA < 41bp 0.557131836913444 0.779394055502664 0.050747752 0.14435542 prediction 0.44452443717844 Functional Gain - SNHG16 ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74561271 chr17:74561272 . . 0 22 hm5C_associated_SNPs_118658 0 0 1 PCBP2 POSTAR2 ENCODE chr17:74561254-74561348
64251 chr17 62518876 62518876 1 + C T COAD 62518875 + 62518855 62518895 41 AGGAAGCTAGGGGAGCCTATCCGAGCAGCTATTCCTTTACA AGGAAGCTAGGGGAGCCTATCTGAGCAGCTATTCCTTTACA < 41bp 0.554852011510805 0.777107595491791 0.93064725 0.7333015 prediction 0.444511167961973 Functional Gain - CEP95 ENSG00000258890 CDS Human protein_coding chr17:62518875 chr17:62518876 stopgain 0.927 0 22 hm5C_associated_SNPs_118660 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:62518858-62518884
64251 chr14 39650912 39650912 1 + T G UCEC 39650910 + 39650890 39650930 41 ACTAGAAAGAAGTCACAAATCTTCAAAAGGTGGTAGTAGTA ACTAGAAAGAAGTCACAAATCTGCAAAAGGTGGTAGTAGTA < 41bp 0.656264623659068 0.87852012386576 0.5903043 0.46577626 prediction 0.444511000413383 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650910 chr14:39650912 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_118661 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr4 4864801 4864801 1 + C A rs371411459 4864800 + 4864780 4864820 41 CTCTGGCCCCTTCCAGCGCGCCGCGCTGCCTGTGGCGCCCG CTCTGGCCCCTTCCAGCGCGCAGCGCTGCCTGTGGCGCCCG < 41bp 0.581634690693809 0.803888822934091 0.5067668 0.80424833 prediction 0.444508264480565 Functional Gain - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864800 chr4:4864801 synonymous SNV . 0 22 hm5C_associated_SNPs_118663 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr4:4864800-4864820
64251 chr15 41192009 41192009 1 + C T SKCM 41192008 + 41191988 41192028 41 ACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTGC ACCCCTAGCCATCGTCTTGACTCAGTTCCACTTCCTGCTGC < 41bp 0.582012475889653 0.804265212861557 0.07245517 0.07098627 prediction 0.444505473943807 Functional Gain - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41192008 chr15:41192009 synonymous SNV . 0 22 hm5C_associated_SNPs_118664 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:41192001-41192029
64251 chr11 65306022 65306022 1 + C T SKCM 65306021 + 65306001 65306041 41 GGGCCCCATGAAGCTGGGAGCCCGGAAGCTGGACTGAACCG GGGCCCCATGAAGCTGGGAGCTCGGAAGCTGGACTGAACCG < 41bp 0.539197129250565 0.761441969128343 0.32557815 0.3092553 prediction 0.444489679755557 Functional Gain - SCYL1 ENSG00000142186 CDS Human protein_coding chr11:65306021 chr11:65306022 synonymous SNV . 0 22 hm5C_associated_SNPs_118668 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:65306010-65306041
64251 chr17 7318115 7318115 1 + C T COAD 7318114 + 7318094 7318134 41 GCGTATCACCATCTTTGGTTCCGGGGCAGGGGCCTCCTGCG GCGTATCACCATCTTTGGTTCTGGGGCAGGGGCCTCCTGCG < 41bp 0.554013360938049 0.776254749943508 0.9024625 0.5875991 prediction 0.444482778010918 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318114 chr17:7318115 synonymous SNV . 0 22 hm5C_associated_SNPs_118669 0 0 3 PTBP1 POSTAR2 GSE57278,GSM1486178 chr17:7318100-7318120
64251 chrX 47061895 47061895 1 + C T UCEC 47061894 + 47061874 47061914 41 CATGGCCGGCCACCTCGGCCCCGCAATGAGGTGGGTGAGTG CATGGCCGGCCACCTCGGCCCTGCAATGAGGTGGGTGAGTG < 41bp 0.598243139114407 0.82047861741678 0.1650435 0.751418 prediction 0.444470956604745 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47061894 chrX:47061895 nonsynonymous SNV 0.983 1 22 hm5C_associated_SNPs_118670 0 0 4 FMR1 POSTAR2 ENCODE chrX:47061878-47061899
64251 chr7 17338672 17338672 1 + C G rs564963089 17338671 + 17338651 17338691 41 CCACCCTCACTGCGCCAGGCCCAGGCAGCTCACCTGTACTG CCACCCTCACTGCGCCAGGCCGAGGCAGCTCACCTGTACTG < 41bp 0.59565602634266 0.817891165628076 0.08145955 0.47034094 prediction 0.444470278570832 Functional Gain - AHR ENSG00000237773 ncRNA_intronic Human antisense chr7:17338671 chr7:17338672 . . 0 22 hm5C_associated_SNPs_118671 0 0 1 DDX3X POSTAR2 ENCODE chr7:17338658-17338830
64251 chr9 103348641 103348641 1 + C T SARC 103348640 + 103348620 103348660 41 CCCCATGAAGGAAGGGAAATCCCCACCCCCGAGCCTTTAAA CCCCATGAAGGAAGGGAAATCTCCACCCCCGAGCCTTTAAA < 41bp 0.602759052061752 0.824982511503824 0.14650413 0.9384208 prediction 0.444446918884144 Functional Gain - CAVIN4 ENSG00000170681 CDS Human protein_coding chr9:103348640 chr9:103348641 nonsynonymous SNV 0.053 0 22 hm5C_associated_SNPs_118674 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:103348635-103348662
64251 chr16 1748959 1748959 1 + T C UCEC 1748957 + 1748937 1748977 41 CCTCGCTCTCACAACAAGGTCCTGAACCCACCGGGAGGCAA CCTCGCTCTCACAACAAGGTCCCGAACCCACCGGGAGGCAA < 41bp 0.447163794003014 0.722222863229605 0.2941093 0.23204562 prediction 0.44444572645921 Functional Gain - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748957 chr16:1748959 nonsynonymous SNV 0.957 4 23 hm5C_associated_SNPs_118675 0 0 13 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:1748940-1748960
64251 chr9 38395969 38395969 1 + A G LUAD 38395966 + 38395946 38395986 41 CGTGGCTGAAGGTGACCGGGCTGATGTGGATCGGGCCGTGA CGTGGCTGAAGGTGACCGGGCTGGTGTGGATCGGGCCGTGA < 41bp 0.572720634489893 0.794942999785398 0.18263602 0.30576822 prediction 0.444444730591009 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38395966 chr9:38395969 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_118676 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr9:38395947-38395971
64251 chr12 124145647 124145647 1 + T C rs143541829 124145645 + 124145625 124145665 41 GCCCAGGAGTTCGAGAGCAGCCTGGGCAGCAAAGTGAGACC GCCCAGGAGTTCGAGAGCAGCCCGGGCAGCAAAGTGAGACC < 41bp 0.547205380738845 0.769404304003829 0.3390935 0.72810066 prediction 0.444397846529967 Functional Gain - GTF2H3 ENSG00000111358 UTR3 Human protein_coding chr12:124145645 chr12:124145647 . . 0 23 hm5C_associated_SNPs_118683 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:124145639-124145662
64251 chr1 10166447 10166447 1 + T G HNSC 10166444 + 10166424 10166464 41 TCCCCGCGGTATCGCCCCTACACTGTCACTCACCCATGGGC TCCCCGCGGTATCGCCCCTACACGGTCACTCACCCATGGGC < 41bp 0.32474805577466 0.722188542436491 0.18530148 0.68169385 prediction 0.444377084872981 Functional Gain - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10166444 chr1:10166447 synonymous SNV . 0 24 hm5C_associated_SNPs_118689 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:10166444-10166458
64251 chr19 860929 860929 1 + T G KIRP 860927 + 860907 860947 41 CAGCCGGAGCCCTCCAAGCGCCTGTACGACGTGCTCCGCGC CAGCCGGAGCCCTCCAAGCGCCGGTACGACGTGCTCCGCGC < 41bp 0.364149856518176 0.722186000445636 0.14701837 0.8830445 prediction 0.444372000891271 Functional Gain - CFD ENSG00000197766 CDS Human protein_coding chr19:860927 chr19:860929 nonsynonymous SNV 0.067 2 23 hm5C_associated_SNPs_118691 0 0 1 DDX3X POSTAR2 ENCODE chr19:860859-860933
64251 chr22 45098187 45098187 1 + A G rs10154351 45098184 + 45098164 45098204 41 CGGGGCGGCCGGCGCGGGACCCGAGACGGAGGCGCGGGGCC CGGGGCGGCCGGCGCGGGACCCGGGACGGAGGCGCGGGGCC < 41bp 0.552783578537268 0.774966113186582 0.7887955 0.895258 prediction 0.444365069298627 Functional Gain - PRR5;PRR5-ARHGAP8 ENSG00000186654;ENSG00000248405 UTR5 Human other chr22:45098184 chr22:45098187 . . 0 24 hm5C_associated_SNPs_118692 0 0 2 CSTF2T POSTAR2 ENCODE chr22:45098178-45098220
64251 chr12 132632297 132632297 1 + C T rs148171235 132632296 + 132632276 132632316 41 CATGCAGGCAGCCGTGGATGCCGTGGCCCGGGTCACTGGCC CATGCAGGCAGCCGTGGATGCTGTGGCCCGGGTCACTGGCC < 41bp 0.520627334696159 0.742793110607731 0.70136416 0.37888488 prediction 0.444331551823144 Functional Gain - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132632296 chr12:132632297 synonymous SNV . 0 22 hm5C_associated_SNPs_118695 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:132632292-132632313
64251 chr12 57906714 57906714 1 + A G UCEC 57906711 + 57906691 57906731 41 CCTGCTGCTGAAGAATAATTCTGAGCTGCTTAACAACCTGG CCTGCTGCTGAAGAATAATTCTGGGCTGCTTAACAACCTGG < 41bp 0.557466745432074 0.779628098916517 0.5412285 0.8687866 prediction 0.444322706968886 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57906711 chr12:57906714 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_118697 0 0 21 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:57906703-57906746
64251 chr3 49736254 49736254 1 + C A rs200446137 49736250 + 49736230 49736270 41 GATGATGGCACTCTGTCCTTCTGCCTGTGAGTTTCCTATCT GATGATGGCACTCTGTCCTTCTGCATGTGAGTTTCCTATCT < 41bp 0.295222440479858 0.722160977674582 0.2427845 0.666054 prediction 0.444321955349164 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49736250 chr3:49736254 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_118698 0 0 7 BUD13 POSTAR2 ENCODE chr3:49736212-49736257
64251 chr13 100637238 100637238 1 + C T UCEC 100637237 + 100637217 100637257 41 TGTGAGTTTGAGGGCTGCGACCGGCGCTTCGCCAACAGCAG TGTGAGTTTGAGGGCTGCGACTGGCGCTTCGCCAACAGCAG < 41bp 0.49143613034011 0.722155218626818 0.76586485 0.310934 prediction 0.444310437253636 Functional Gain - ZIC2 ENSG00000043355 CDS Human protein_coding chr13:100637237 chr13:100637238 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118701 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:100637208-100637246
64251 chr7 94293505 94293505 1 + C T SKCM 94293504 + 94293484 94293524 41 TACCACGAGGGCCTCAGCGACCACATTCAGGAGGAGCTCTC TACCACGAGGGCCTCAGCGACTACATTCAGGAGGAGCTCTC < 41bp 0.461754383343496 0.722154402061036 0.28873432 0.91804814 prediction 0.444308804122072 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293504 chr7:94293505 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_118703 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:94293426-94293541
64251 chr7 43484455 43484455 1 + C T COAD 43484454 + 43484434 43484474 41 ACCCCGCGGACACACTACATCCGCATCCACACCCTGCTGCA ACCCCGCGGACACACTACATCTGCATCCACACCCTGCTGCA < 41bp 0.550963815679558 0.773117426281799 0.008982629 0.06494409 prediction 0.444307221204482 Functional Gain - HECW1 ENSG00000002746 CDS Human protein_coding chr7:43484454 chr7:43484455 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_118704 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:43484433-43484455
64251 chr17 46925460 46925460 1 + T C LIHC 46925458 + 46925438 46925478 41 ACAACCCGTGAGTATTACACCTTCATGTGGGTTACTTTGCC ACAACCCGTGAGTATTACACCTCCATGTGGGTTACTTTGCC < 41bp 0.404800710033872 0.722149438418906 0.41819835 0.96491873 prediction 0.444298876837812 Functional Gain - CALCOCO2 ENSG00000136436 CDS Human protein_coding chr17:46925458 chr17:46925460 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_118707 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:46925449-46925481
64251 chr17 79986538 79986538 1 + C G rs114763314 79986537 + 79986517 79986557 41 CAGACAGAGCCTGGAGGACTCCGAAAGCCTGCGCATCAAGG CAGACAGAGCCTGGAGGACTCGGAAAGCCTGCGCATCAAGG < 41bp 0.401055392042734 0.722142936927963 0.36750096 0.7593992 prediction 0.444285873855927 Functional Gain - LRRC45 ENSG00000169683 CDS Human protein_coding chr17:79986537 chr17:79986538 synonymous SNV . 0 22 hm5C_associated_SNPs_118711 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:79986514-79986539
64251 chr17 45747200 45747200 1 + A G UCEC 45747197 + 45747177 45747217 41 TACAGTGTCTGATTGAGGGTCTCAGTGCTGAACCCAGAGTG TACAGTGTCTGATTGAGGGTCTCGGTGCTGAACCCAGAGTG < 41bp 0.475309244065761 0.722139884610961 0.056173444 0.109484136 prediction 0.444279769221922 Functional Gain - KPNB1 ENSG00000108424 CDS Human protein_coding chr17:45747197 chr17:45747200 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_118713 0 0 42 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:45747040-45747200
64251 chrX 47045017 47045017 1 + A G LUAD 47045014 + 47044994 47045034 41 CTCATCCGGCACCAGCAGCTCTCAGGGCTCCACAAGGTAAC CTCATCCGGCACCAGCAGCTCTCGGGGCTCCACAAGGTAAC < 41bp 0.566915717563601 0.789054580038484 0.041956455 0.216986 prediction 0.444277724949765 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47045014 chrX:47045017 synonymous SNV . 0 24 hm5C_associated_SNPs_118714 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:47044986-47045022
64251 chr19 45977254 45977254 1 + C A rs538785711 45977250 + 45977230 45977270 41 CCCGAAAGCCTTTCCTCGGTCTCCCTTCCGTCCATCCCCCT CCCGAAAGCCTTTCCTCGGTCTCCATTCCGTCCATCCCCCT < 41bp 0.307821048418288 0.722135411246589 0.06438631 0.9452974 prediction 0.444270822493178 Functional Gain - FOSB ENSG00000125740 UTR3 Human protein_coding chr19:45977250 chr19:45977254 . . 0 25 hm5C_associated_SNPs_118716 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:45977237-45977287
64251 chr12 16516816 16516816 1 + C A STAD 16516812 + 16516792 16516832 41 GAGTGGTCCCGACCCCTCTACAGCCATCCTGCACTTCAGAC GAGTGGTCCCGACCCCTCTACAGCAATCCTGCACTTCAGAC < 41bp 0.330323827526466 0.722133312074551 0.05771807 0.039094508 prediction 0.444266624149102 Functional Gain - MGST1 ENSG00000008394 CDS Human protein_coding chr12:16516812 chr12:16516816 synonymous SNV . 0 25 hm5C_associated_SNPs_118717 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:16516783-16516822
64251 chr2 27322348 27322348 1 + A G UCEC 27322345 + 27322325 27322365 41 GACGCCCTGGGCCCTGATGGCAAATTGCTCCACTCGGATGC GACGCCCTGGGCCCTGATGGCAAGTTGCTCCACTCGGATGC < 41bp 0.584793943922548 0.806919168928454 0.63339686 0.6888863 prediction 0.444250450011811 Functional Gain - KHK ENSG00000138030 CDS Human protein_coding chr2:27322345 chr2:27322348 synonymous SNV . 0 24 hm5C_associated_SNPs_118719 0 0 3 DDX6 POSTAR2 ENCODE chr2:27322284-27322352
64251 chr11 123988252 123988252 1 + C T COAD 123988251 + 123988231 123988271 41 TGTGGCCTACTCACCCTCCACCGGGAGCCAGGTAAGCCTAA TGTGGCCTACTCACCCTCCACTGGGAGCCAGGTAAGCCTAA < 41bp 0.554314573773602 0.776428229365331 0.66187775 0.16511741 prediction 0.444227311183459 Functional Gain - VWA5A ENSG00000110002 CDS Human protein_coding chr11:123988251 chr11:123988252 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_118721 0 0 1 DDX3X POSTAR2 ENCODE chr11:123988206-123988262
64251 chr11 65292600 65292600 1 + C G rs371507840 65292599 + 65292579 65292619 41 AGGACCCGGAGCTAAGGCGCCCGAACCCGCGGCGGCGGTGG AGGACCCGGAGCTAAGGCGCCGGAACCCGCGGCGGCGGTGG < 41bp 0.589347490099571 0.811459045463455 0.30176514 0.8509284 prediction 0.444223110727769 Functional Gain - SCYL1 ENSG00000142186 UTR5 Human protein_coding chr11:65292599 chr11:65292600 . . 0 22 hm5C_associated_SNPs_118722 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819211 chr11:65292580-65292600
64251 chr1 146740479 146740479 1 + A G UCEC 146740476 + 146740456 146740496 41 CTTTTGAAGTTGGAGACCACCTGACTGAGGCTAGTGGGAAG CTTTTGAAGTTGGAGACCACCTGGCTGAGGCTAGTGGGAAG < 41bp 0.529100458870886 0.751204224524245 0.27014703 0.4328066 prediction 0.444207531306719 Functional Gain - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146740476 chr1:146740479 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_118725 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:146740434-146740494
64251 chr19 10742002 10742002 1 + A G LIHC 10741999 + 10741979 10742019 41 ACCTCACGTACCTGAATGCTCGCAGCTCCCGGGACTTTGAG ACCTCACGTACCTGAATGCTCGCGGCTCCCGGGACTTTGAG < 41bp 0.58442579679809 0.806529304192881 0.8047674 0.89999753 prediction 0.444207014789583 Functional Gain - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10741999 chr19:10742002 nonsynonymous SNV 0.179 0 24 hm5C_associated_SNPs_118726 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr19:10741986-10742019
64251 chr6 111804797 111804797 1 + C G rs573182305 111804793 + 111804773 111804813 41 TTGGCAGGAGCTGCGATGCTCACACTTGCCTCGCCGACCGC TTGGCAGGAGCTGCGATGCTCACAGTTGCCTCGCCGACCGC < 41bp 0.44002055971432 0.722098795326705 0.07847792 0.45162952 prediction 0.44419759065341 Functional Gain - TRAF3IP2-AS1 ENSG00000231889 ncRNA_exonic Human antisense chr6:111804793 chr6:111804797 . . 0 25 hm5C_associated_SNPs_118729 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:111804790-111804827
64251 chr5 54620023 54620023 1 + T C UCEC 54620021 + 54620001 54620041 41 AAACTGTTGAAGGGTGTACACATGAGGTAAGCACAAACAGC AAACTGTTGAAGGGTGTACACACGAGGTAAGCACAAACAGC < 41bp 0.612235467927978 0.834329469081501 0.2849677 0.31982 prediction 0.444188002307045 Functional Gain - SKIV2L2 ENSG00000039123 CDS Human protein_coding chr5:54620021 chr5:54620023 synonymous SNV . 0 23 hm5C_associated_SNPs_118730 0 0 1 EFTUD2 POSTAR2 ENCODE chr5:54620010-54620147
64251 chr1 28285067 28285067 1 + C T COAD 28285066 + 28285046 28285086 41 GGAGCTCGAGTACCAGCTGACCGAGGCCTATGGGGTGCCGG GGAGCTCGAGTACCAGCTGACTGAGGCCTATGGGGTGCCGG < 41bp 0.534408503421338 0.756496963498701 0.9070133 0.8873671 prediction 0.444176920154727 Functional Gain - SMPDL3B ENSG00000130768 CDS Human protein_coding chr1:28285066 chr1:28285067 synonymous SNV . 0 22 hm5C_associated_SNPs_118731 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:28285067-28285096
64251 chr19 4408961 4408961 1 + C G rs368639662 4408957 + 4408937 4408977 41 GGGGAAAGCCGATGACATGTCAGACGATCAGGGTACTTCTG GGGGAAAGCCGATGACATGTCAGAGGATCAGGGTACTTCTG < 41bp 0.418818128954906 0.722080379751946 0.67987466 0.9148867 prediction 0.444160759503892 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4408957 chr19:4408961 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_118735 0 0 14 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:4408880-4408980
64251 chr15 90814944 90814944 1 + A G rs16944113 90814941 + 90814921 90814961 41 GGAGTTGAAGGCAGAGGAGCCAGATAACTTCAGCAGCAAAG GGAGTTGAAGGCAGAGGAGCCAGGTAACTTCAGCAGCAAAG < 41bp 0.478648344325004 0.722075532334778 0.81924963 0.8848868 prediction 0.444151064669556 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814941 chr15:90814944 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_118737 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90814825-90814944
64251 chr1 211486237 211486237 1 + T A KIRC 211486233 + 211486213 211486253 41 GGCTTCTAATGGTGATGCTTCTACTTTAGGGGAGGAGACAA GGCTTCTAATGGTGATGCTTCTACATTAGGGGAGGAGACAA < 41bp 0.370279201788323 0.722070208427989 0.07562715 0.7455555 prediction 0.444140416855978 Functional Gain - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211486233 chr1:211486237 synonymous SNV . 0 25 hm5C_associated_SNPs_118740 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:211486200-211486241
64251 chr1 107600277 107600277 1 + C T BRCA 107600276 + 107600256 107600296 41 CTGTCCACCTCGCCTTTTCACCCGGCCACTCACTGGAAACA CTGTCCACCTCGCCTTTTCACTCGGCCACTCACTGGAAACA < 41bp 0.537188880161535 0.759247893633534 0.3636396 0.24980575 prediction 0.444118026943998 Functional Gain - PRMT6 ENSG00000198890 CDS Human protein_coding chr1:107600276 chr1:107600277 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_118742 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:107600267-107600290
64251 chr3 49210376 49210376 1 + A G LGG 49210373 + 49210353 49210393 41 ACACTGGACATGGCCTCGCACACATGGCTGGCACTGGCACC ACACTGGACATGGCCTCGCACACGTGGCTGGCACTGGCACC < 41bp 0.572487045925039 0.794536133074745 0.07956737 0.26550847 prediction 0.444098174299412 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49210373 chr3:49210376 synonymous SNV . 0 24 hm5C_associated_SNPs_118744 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49210352-49210377
64251 chr9 37430673 37430673 1 + C T SARC 37430672 + 37430652 37430692 41 GGGCCACCTTACCCAGCAAGCCTGGAGAGGAGCCATCCCCA GGGCCACCTTACCCAGCAAGCTTGGAGAGGAGCCATCCCCA < 41bp 0.488306428201773 0.72203720089068 0.37877014 0.18306181 prediction 0.444074401781359 Functional Gain - GRHPR ENSG00000137106 CDS Human protein_coding chr9:37430672 chr9:37430673 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_118747 0 0 3 BUD13 POSTAR2 ENCODE chr9:37430611-37430695
64251 chr17 33289325 33289325 1 + C G KIRP 33289324 + 33289304 33289344 41 AAAACACCGCGGAAGCGTTACCGGAAGGTTTTTTTGACGAC AAAACACCGCGGAAGCGTTACGGGAAGGTTTTTTTGACGAC < 41bp 0.657950394752817 0.879982084910346 0.3023983 0.4613193 prediction 0.444063380315058 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33289324 chr17:33289325 nonsynonymous SNV 0.908 5 22 hm5C_associated_SNPs_118748 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:33289320-33289340
64251 chr17 3564218 3564218 1 + T C rs1048646 3564216 + 3564196 3564236 41 TCTGTACATAACTCAGCGTCCGTGACTGCAGTAACAGCCAG TCTGTACATAACTCAGCGTCCGCGACTGCAGTAACAGCCAG < 41bp 0.5662189609565 0.788242229574277 0.022527188 0.045432597 prediction 0.444046537235553 Functional Gain - CTNS ENSG00000040531 UTR3 Human protein_coding chr17:3564216 chr17:3564218 . . 0 23 hm5C_associated_SNPs_118749 2 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:3564200-3564220
64251 chr6 30037008 30037008 1 + C G GBM 30037007 + 30036987 30037027 41 CAAAGGACGGCGTCGTGCAACCCTAGGACCGACCCCCACCA CAAAGGACGGCGTCGTGCAACGCTAGGACCGACCCCCACCA < 41bp 0.462033290894599 0.722011149191445 0.24868885 0.41968504 prediction 0.44402229838289 Functional Gain - PPP1R11 ENSG00000204619 CDS Human protein_coding chr6:30037007 chr6:30037008 synonymous SNV . 0 22 hm5C_associated_SNPs_118754 0 0 1 HNRNPK POSTAR2 ENCODE chr6:30037008-30037121
64251 chr19 36279135 36279135 1 + C T KICH 36279134 + 36279114 36279154 41 CCCGTACCCCTCATAGGGTGCCGGGTCCCTGGGGCCCTCCT CCCGTACCCCTCATAGGGTGCTGGGTCCCTGGGGCCCTCCT < 41bp 0.510303012206224 0.732310012716872 0.91326284 0.56601614 prediction 0.444014001021296 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36279134 chr19:36279135 nonsynonymous SNV 0.020 1 22 hm5C_associated_SNPs_118756 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:36279096-36279166
64251 chr19 17611562 17611562 1 + C T UCEC 17611561 + 17611541 17611581 41 GAGCTGGGCTACATGTACTTCCGGGACCGTAGCGGGGACAC GAGCTGGGCTACATGTACTTCTGGGACCGTAGCGGGGACAC < 41bp 0.575805688288871 0.79781146929539 0.81857395 0.5269019 prediction 0.44401156201304 Functional Gain - SLC27A1 ENSG00000130304 CDS Human protein_coding chr19:17611561 chr19:17611562 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_118758 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:17611552-17611590
64251 chr3 100000595 100000595 1 + A G GBM 100000592 + 100000572 100000612 41 AATCTTTCTTCCAGATTGCTCTGAATGTTGCAGGAAAAGGT AATCTTTCTTCCAGATTGCTCTGGATGTTGCAGGAAAAGGT < 41bp 0.512099776887363 0.734098951646735 0.20019537 0.2973749 prediction 0.443998349518744 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100000592 chr3:100000595 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_118760 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:100000585-100000612
64251 chr1 114447978 114447978 1 + C A rs28364566 114447977 + 114447957 114447997 41 GCCCGGCTCGGCCTCCGCTCCCGCGCGGTTGGGAGTGTCCA GCCCGGCTCGGCCTCCGCTCCAGCGCGGTTGGGAGTGTCCA < 41bp 0.54611483463857 0.768102677150606 0.122644186 0.4103235 prediction 0.443975685024071 Functional Gain - DCLRE1B ENSG00000118655 UTR5 Human protein_coding chr1:114447977 chr1:114447978 . . 0 22 hm5C_associated_SNPs_118765 0 0 2 DDX3X POSTAR2 ENCODE chr1:114447965-114448057
64251 chr1 155699118 155699118 1 + T C rs4933 155699116 + 155699096 155699136 41 CCGTGGATGGAATCAATGCTCTTTGGGGAAGAACCACTCTG CCGTGGATGGAATCAATGCTCTCTGGGGAAGAACCACTCTG < 41bp 0.44070389245622 0.721987206217448 0.33994007 0.2548076 prediction 0.443974412434897 Functional Gain - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155699116 chr1:155699118 synonymous SNV . 0 23 hm5C_associated_SNPs_118766 0 0 12 RBM15 POSTAR2 GSE78030,GSM2064710 chr1:155699100-155699120
64251 chr12 64202695 64202695 1 + T C UCEC 64202692 + 64202672 64202712 41 TCCATGGGTGCTCCCTTTATCTTTATCAAGAACTGGAAGGA TCCATGGGTGCTCCCTTTATCTTCATCAAGAACTGGAAGGA < 41bp 0.515144120632471 0.737128577990171 0.023793042 0.024717152 prediction 0.443968914715399 Functional Gain - TMEM5 ENSG00000118600 CDS Human protein_coding chr12:64202692 chr12:64202695 synonymous SNV . 0 24 hm5C_associated_SNPs_118769 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:64202669-64202707
64251 chr1 173819569 173819569 1 + C T UCEC 173819568 + 173819548 173819588 41 ATTAATCAGACTAATGGAGACCCAAGAGGAAGATGTGGTCC ATTAATCAGACTAATGGAGACTCAAGAGGAAGATGTGGTCC < 41bp 0.463871944857046 0.721967076928964 0.074716896 0.2728405 prediction 0.443934153857928 Functional Gain - DARS2 ENSG00000117593 CDS Human protein_coding chr1:173819568 chr1:173819569 synonymous SNV . 0 22 hm5C_associated_SNPs_118773 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:173819528-173819588
64251 chr9 35674098 35674098 1 + C T SKCM 35674097 + 35674077 35674117 41 CCCCGGATGCAGGAGGATTCCCCCTTGGGAGGAGGCTCTTC CCCCGGATGCAGGAGGATTCCTCCTTGGGAGGAGGCTCTTC < 41bp 0.565045986364878 0.787012773898948 0.22777754 0.40122664 prediction 0.443933575068141 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35674097 chr9:35674098 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_118774 0 0 3 DDX3X POSTAR2 ENCODE chr9:35674080-35674124
64251 chr15 41105992 41105992 1 + C T rs72735636 41105991 + 41105971 41106011 41 TCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGGT TCTCGACCCTGGACGCAACCCTGCGGGGCAGAGCCTGAGGT < 41bp 0.584581201715787 0.806545026257174 0.44445142 0.23580295 prediction 0.443927649082775 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41105991 chr15:41105992 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_118776 0 0 5 BUD13 POSTAR2 ENCODE chr15:41105921-41106013
64251 chr1 900460 900460 1 + C T UCEC 900459 + 900439 900479 41 GAGGACCAACAAGTGGGTGGCCGCATCCTGCATGTTCACCC GAGGACCAACAAGTGGGTGGCTGCATCCTGCATGTTCACCC < 41bp 0.547864885162419 0.769820781017918 0.32763255 0.85308474 prediction 0.443911791710998 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:900459 chr1:900460 synonymous SNV . 0 22 hm5C_associated_SNPs_118778 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:900449-900469
64251 chr2 120712791 120712791 1 + T C UCEC 120712789 + 120712769 120712809 41 AGCCAGATTTCCAGTATATTCCTGAGAAAGCCCCACTAGAT AGCCAGATTTCCAGTATATTCCCGAGAAAGCCCCACTAGAT < 41bp 0.433718725242762 0.721951548471154 0.21136391 0.288347 prediction 0.443903096942307 Functional Gain - PTPN4 ENSG00000088179 CDS Human protein_coding chr2:120712789 chr2:120712791 synonymous SNV . 0 23 hm5C_associated_SNPs_118780 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:120712782-120712805
64251 chr1 10473274 10473274 1 + C T SKCM 10473273 + 10473253 10473293 41 AGGGAAGTGGACCGCCATCTCCGCCCTGGAATACGGCGTAC AGGGAAGTGGACCGCCATCTCTGCCCTGGAATACGGCGTAC < 41bp 0.585220141578101 0.807165580184319 0.35034698 0.28554887 prediction 0.443890877212437 Functional Gain - PGD ENSG00000142657 CDS Human protein_coding chr1:10473273 chr1:10473274 synonymous SNV . 0 22 hm5C_associated_SNPs_118784 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr1:10473217-10473283
64251 chr17 27026839 27026839 1 + C T TGCT 27026838 + 27026818 27026858 41 ACTCCAGAGGGATTCCGGTACCGGGGCCAGATCTTCCCAAC ACTCCAGAGGGATTCCGGTACTGGGGCCAGATCTTCCCAAC < 41bp 0.471670950969733 0.721945054230691 0.942804 0.9111042 prediction 0.443890108461382 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27026838 chr17:27026839 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118785 0 0 9 FMR1 POSTAR2 GSE39682,GSM977616 chr17:27026804-27026844
64251 chr4 166388900 166388900 1 + C T GBM 166388899 + 166388879 166388919 41 GCCCAGGGAATAGATCTGAACCGGAACTTTCCAGACCTGGA GCCCAGGGAATAGATCTGAACTGGAACTTTCCAGACCTGGA < 41bp 0.577448200585015 0.79938213703078 0.10461575 0.14844033 prediction 0.443867872891529 Functional Gain - CPE ENSG00000109472 CDS Human protein_coding chr4:166388899 chr4:166388900 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_118787 0 0 4 CPSF1 POSTAR2 GSE37401,GSM917672 chr4:166388894-166388924
64251 chr4 71824681 71824681 1 + A G UCEC 71824678 + 71824658 71824698 41 CTCTTAAAACACGCAGAAGCCACACTTGGCAGTGGCAACCT CTCTTAAAACACGCAGAAGCCACGCTTGGCAGTGGCAACCT < 41bp 0.520660445916905 0.742589284399465 0.022543311 0.021649271 prediction 0.443857676965119 Functional Gain - MOB1B ENSG00000173542 CDS Human protein_coding chr4:71824678 chr4:71824681 synonymous SNV . 0 24 hm5C_associated_SNPs_118790 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:71824663-71824705
64251 chr15 100214636 100214636 1 + A G UCEC 100214633 + 100214613 100214653 41 CAGAACTTTTCAATGTCTGTCACAGTTCCAGTGACCAGCCC CAGAACTTTTCAATGTCTGTCACGGTTCCAGTGACCAGCCC < 41bp 0.527392482572484 0.749319155676625 0.1929129 0.2089096 prediction 0.443853346208283 Functional Gain - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100214633 chr15:100214636 synonymous SNV . 0 24 hm5C_associated_SNPs_118791 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:100214615-100214637
64251 chr3 12560665 12560665 1 + C A SKCM 12560664 + 12560644 12560684 41 TCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACG TCGAAGCAAGGGCTGGGTGCCAAAAGTGGGACTCAAGTACG < 41bp 0.457798734766076 0.721921341689361 0.038954854 0.14417017 prediction 0.443842683378722 Functional Gain - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12560664 chr3:12560665 synonymous SNV . 0 22 hm5C_associated_SNPs_118792 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:12560645-12560676
64251 chr11 117034568 117034568 1 + T A LAML 117034564 + 117034544 117034584 41 GTGGGATCGAGGCCATTGTACAACTTATCAACACAAGGCAG GTGGGATCGAGGCCATTGTACAACATATCAACACAAGGCAG < 41bp 0.386445077831077 0.721919777150051 0.10640472 0.09538004 prediction 0.443839554300101 Functional Gain - PAFAH1B2 ENSG00000168092 CDS Human protein_coding chr11:117034564 chr11:117034568 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_118794 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr11:117034495-117034576
64251 chr11 7654163 7654163 1 + C T PAAD 7654162 + 7654142 7654182 41 GCCACAGAAATCACTGGAAACCAGGTAAGAGGCCTGGGCAT GCCACAGAAATCACTGGAAACTAGGTAAGAGGCCTGGGCAT < 41bp 0.481933269477816 0.72190963666443 0.90198207 0.42277056 prediction 0.443819273328861 Functional Gain - PPFIBP2 ENSG00000166387 CDS Human protein_coding chr11:7654162 chr11:7654163 synonymous SNV . 0 22 hm5C_associated_SNPs_118800 0 0 1 PRPF8 POSTAR2 ENCODE chr11:7654161-7654227
64251 chr3 50683688 50683688 1 + T C UCEC 50683685 + 50683665 50683705 41 AATCCTGAGTGGTCAGAAGTCTCTGAGGATGGTGAGTGAAC AATCCTGAGTGGTCAGAAGTCTCCGAGGATGGTGAGTGAAC < 41bp 0.523713826530909 0.745620128004579 0.25832406 0.74815786 prediction 0.443812602947341 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683685 chr3:50683688 synonymous SNV . 0 24 hm5C_associated_SNPs_118803 0 0 1 PPIG POSTAR2 ENCODE chr3:50683633-50683712
64251 chr3 113673211 113673211 1 + C A BLCA 113673210 + 113673190 113673230 41 CCAGCCCGGGCATGGCACTGCCGGATATGTGGCATCTGTGT CCAGCCCGGGCATGGCACTGCAGGATATGTGGCATCTGTGT < 41bp 0.57583017293448 0.797726682980646 0.8623878 0.8827692 prediction 0.443793020092331 Functional Gain - ZDHHC23 ENSG00000184307 CDS Human protein_coding chr3:113673210 chr3:113673211 synonymous SNV . 0 22 hm5C_associated_SNPs_118806 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr3:113673188-113673231
64251 chr6 43608202 43608202 1 + C T UCEC 43608201 + 43608181 43608221 41 TCATGTGGCAGACCTTCCATCCGAACCACGGCTTGGGAAGA TCATGTGGCAGACCTTCCATCTGAACCACGGCTTGGGAAGA < 41bp 0.559569059099454 0.781462307593565 0.4608169 0.252287 prediction 0.443786496988222 Functional Gain - MAD2L1BP ENSG00000124688 CDS Human protein_coding chr6:43608201 chr6:43608202 stopgain 0.350 0 22 hm5C_associated_SNPs_118808 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43608174-43608223
64251 chr9 38395797 38395797 1 + C G rs139074626 38395793 + 38395773 38395813 41 CTTAGCCTCCAGGGCAGGACCGCCCGCTACTCCTCGGCAGC CTTAGCCTCCAGGGCAGGACCGCCGGCTACTCCTCGGCAGC < 41bp 0.630517508102236 0.852402503382439 0.07461512 0.2749204 prediction 0.443769990560406 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38395793 chr9:38395797 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_118809 0 0 5 DDX3X POSTAR2 ENCODE chr9:38395744-38395834
64251 chr1 44446940 44446940 1 + C T LUSC 44446939 + 44446919 44446959 41 CCTCTACTTTGACGTCTACGCCCAGCACCTGGCCTTCTTCA CCTCTACTTTGACGTCTACGCTCAGCACCTGGCCTTCTTCA < 41bp 0.476379314359512 0.721880270230056 0.20655566 0.123473436 prediction 0.443760540460111 Functional Gain - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446939 chr1:44446940 synonymous SNV . 0 22 hm5C_associated_SNPs_118810 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:44446880-44446942
64251 chr11 47256959 47256959 1 + T C UCEC 47256957 + 47256937 47256977 41 CACTTCCAGCACCTCACACCCATCAAGGTGAGTGGCGGTGG CACTTCCAGCACCTCACACCCACCAAGGTGAGTGGCGGTGG < 41bp 0.599204723889232 0.821084941423462 0.11096713 0.16614774 prediction 0.44376043506846 Functional Gain - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256957 chr11:47256959 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_118811 0 0 5 EFTUD2 POSTAR2 ENCODE chr11:47256932-47257001
64251 chr16 29830993 29830993 1 + T C rs537426155 29830991 + 29830971 29831011 41 ACCGGGAGGGACCTCTTCAGCCTGGACTCGGAGGACCCCAG ACCGGGAGGGACCTCTTCAGCCCGGACTCGGAGGACCCCAG < 41bp 0.589504860814063 0.811385043113317 0.07530728 0.18153924 prediction 0.443760364598509 Functional Gain - PAGR1 ENSG00000185928;ENSG00000263136 CDS Human other chr16:29830991 chr16:29830993 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_118812 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr16:29830946-29831044
64251 chr15 96877562 96877562 1 + C T SKCM 96877561 + 96877541 96877581 41 GCCCGGAACATCCCCTTCTTCCCCGACCTGCAGATCACGGA GCCCGGAACATCCCCTTCTTCTCCGACCTGCAGATCACGGA < 41bp 0.450440016923312 0.721871769752325 0.2374385 0.33701319 prediction 0.443743539504651 Functional Gain - NR2F2 ENSG00000185551 CDS Human protein_coding chr15:96877561 chr15:96877562 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118813 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:96877524-96877562
64251 chr7 115891867 115891867 1 + C T UCEC 115891866 + 115891846 115891886 41 AGGTGACCCAGCCATCTATGCCGAAAGGGCTGGCTATGATA AGGTGACCCAGCCATCTATGCTGAAAGGGCTGGCTATGATA < 41bp 0.458092057068215 0.721870947755681 0.049400777 0.1780585 prediction 0.443741895511363 Functional Gain - TES ENSG00000135269 CDS Human protein_coding chr7:115891866 chr7:115891867 synonymous SNV . 0 22 hm5C_associated_SNPs_118814 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr7:115891834-115891872
64251 chr19 17534390 17534390 1 + T C rs148484007 17534388 + 17534368 17534408 41 CCCCGAGGTCTCAGCCGGGACATGCAGGGCCTCTCTCTGGA CCCCGAGGTCTCAGCCGGGACACGCAGGGCCTCTCTCTGGA < 41bp 0.455241724951753 0.721869545440557 0.13797179 0.0270482 prediction 0.443739090881113 Functional Gain - MVB12A ENSG00000141971 CDS Human protein_coding chr19:17534388 chr19:17534390 nonsynonymous SNV 0.976 0 23 hm5C_associated_SNPs_118815 0 0 1 PPIG POSTAR2 ENCODE chr19:17534380-17534426
64251 chr5 150158371 150158371 1 + C A CESC 150158367 + 150158347 150158387 41 CCGCTCCTGCGCTCTCCCGCCTCCCGGGGCTCGGAGGAGCC CCGCTCCTGCGCTCTCCCGCCTCCAGGGGCTCGGAGGAGCC < 41bp 0.403696113173336 0.721860664993071 0.24347523 0.93821335 prediction 0.443721329986143 Functional Gain - SMIM3 ENSG00000269636 CDS Human other chr5:150158367 chr5:150158371 synonymous SNV . 0 25 hm5C_associated_SNPs_118817 0 0 4 DDX3X POSTAR2 ENCODE chr5:150158347-150158485
64251 chr22 44489850 44489850 1 + C G rs34476853 44489849 + 44489829 44489869 41 GCAAGAATGCCATCAACTCACCGATGTCCCCCGCCCTGGTG GCAAGAATGCCATCAACTCACGGATGTCCCCCGCCCTGGTG < 41bp 0.387695514311305 0.721853858109322 0.21486562 0.8709854 prediction 0.443707716218645 Functional Gain - PARVB ENSG00000188677 CDS Human protein_coding chr22:44489849 chr22:44489850 nonsynonymous SNV 0.976 3 22 hm5C_associated_SNPs_118820 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:44489840-44489860
64251 chr11 119207718 119207718 1 + T G rs141066351 119207715 + 119207695 119207735 41 TCCCAACCTGATCCAAAAGCCAGTCTCAGGAGTTTACCCCT TCCCAACCTGATCCAAAAGCCAGGCTCAGGAGTTTACCCCT < 41bp 0.369981512899653 0.721842686843579 0.065820456 0.760997 prediction 0.443685373687158 Functional Gain - RNF26 ENSG00000245385 ncRNA_intronic Human antisense chr11:119207715 chr11:119207718 . . 0 24 hm5C_associated_SNPs_118822 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:119207704-119207748
64251 chr1 155279704 155279704 1 + C T SKCM 155279703 + 155279683 155279723 41 CTGGTGCACGGGTACCCAGTCCTGGCCTGGCACAGTGCCCG CTGGTGCACGGGTACCCAGTCTTGGCCTGGCACAGTGCCCG < 41bp 0.47920035203738 0.721836300402034 0.19512203 0.11368722 prediction 0.443672600804069 Functional Gain - FDPS ENSG00000160752 CDS Human protein_coding chr1:155279703 chr1:155279704 synonymous SNV . 0 22 hm5C_associated_SNPs_118825 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:155279615-155279711
64251 chr20 2636321 2636321 1 + A G HNSC 2636318 + 2636298 2636338 41 TGTCTTTATCTGAATACCGCCAGAGCCTACACACTTACCTG TGTCTTTATCTGAATACCGCCAGGGCCTACACACTTACCTG < 41bp 0.480002538478218 0.721830642150478 0.7807417 0.8374727 prediction 0.443661284300957 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2636318 chr20:2636321 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_118829 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:2636250-2636340
64251 chr9 2635505 2635505 1 + T C STAD 2635502 + 2635482 2635522 41 TTCCAGTGCACAAATGGTCGCTGTATTACGCTGTTGTGGAA TTCCAGTGCACAAATGGTCGCTGCATTACGCTGTTGTGGAA < 41bp 0.516315253493925 0.738140656514963 0.018396705 0.010552615 prediction 0.443650806042076 Functional Gain - VLDLR ENSG00000147852 CDS Human protein_coding chr9:2635502 chr9:2635505 synonymous SNV . 0 24 hm5C_associated_SNPs_118833 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr9:2635489-2635514
64251 chr8 86386612 86386612 1 + T C SKCM 86386610 + 86386590 86386630 41 TTGGGAAAGCTGTGCAGCAACCTGATGGACTGGCCGTTCTA TTGGGAAAGCTGTGCAGCAACCCGATGGACTGGCCGTTCTA < 41bp 0.641932798282994 0.863751735545045 0.37496537 0.51070666 prediction 0.443637874524102 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86386610 chr8:86386612 stoploss . 0 23 hm5C_associated_SNPs_118837 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:86386578-86386629
64251 chr15 23812249 23812249 1 + A G LAML 23812246 + 23812226 23812266 41 CCAGGTGGTGGGTCATTCAGCGCATACTGGCATCAACTTGT CCAGGTGGTGGGTCATTCAGCGCGTACTGGCATCAACTTGT < 41bp 0.467910130514885 0.721812425526062 0.027145356 0.10369101 prediction 0.443624851052124 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23812246 chr15:23812249 synonymous SNV . 0 24 hm5C_associated_SNPs_118839 0 0 1 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:23812249-23812250
64251 chr15 75949418 75949418 1 + C T KICH 75949417 + 75949397 75949437 41 GGTGGGTTTCGCCCTGCAGGCCGAGATGAACCACTTCCACC GGTGGGTTTCGCCCTGCAGGCTGAGATGAACCACTTCCACC < 41bp 0.494544588515766 0.721803520161408 0.45748925 0.28966314 prediction 0.443607040322817 Functional Gain - SNX33 ENSG00000173548 CDS Human protein_coding chr15:75949417 chr15:75949418 synonymous SNV . 0 22 hm5C_associated_SNPs_118844 0 0 1 RPS3 POSTAR2 ENCODE chr15:75949338-75949451
64251 chr1 214170736 214170736 1 + C T HNSC 214170735 + 214170715 214170755 41 GCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACTCTGTCG GCGCTCGGAGATCCTGGATGCTAGGGCCCAGGACTCTGTCG < 41bp 0.498384409293382 0.721797600519724 0.8666264 0.38040078 prediction 0.443595201039447 Functional Gain - PROX1 ENSG00000117707 CDS Human protein_coding chr1:214170735 chr1:214170736 synonymous SNV . 0 22 hm5C_associated_SNPs_118845 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:214170717-214170738
64251 chr16 29816160 29816160 1 + C T SKCM 29816159 + 29816139 29816179 41 AGTCCCTGGATGCCCTAGAGCCTGAGGAGAAGGCTGAGGAC AGTCCCTGGATGCCCTAGAGCTTGAGGAGAAGGCTGAGGAC < 41bp 0.578474773591669 0.800271257978385 0.4162504 0.24092141 prediction 0.443592968773433 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816159 chr16:29816160 nonsynonymous SNV 0.521 0 22 hm5C_associated_SNPs_118847 0 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:29816132-29816190
64251 chr18 32395925 32395925 1 + C T UVM 32395924 + 32395904 32395944 41 CGCTTATGTCAGATCCTCCCCCGCAGTGTCTGGTCTGGTTG CGCTTATGTCAGATCCTCCCCTGCAGTGTCTGGTCTGGTTG < 41bp 0.505447646483332 0.727243578126558 0.07834056 0.20513299 prediction 0.443591863286453 Functional Gain - DTNA ENSG00000134769 CDS Human protein_coding chr18:32395924 chr18:32395925 nonsynonymous SNV 0.097 5 22 hm5C_associated_SNPs_118848 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:32395913-32395958
64251 chr8 22370886 22370886 1 + T G KIRC 22370883 + 22370863 22370903 41 GATCCCTCAGAGGATTATGGCAATGAGAAGACCTTGGAGCA GATCCCTCAGAGGATTATGGCAAGGAGAAGACCTTGGAGCA < 41bp 0.31779302953584 0.721788887384606 0.41884306 0.9083332 prediction 0.443577774769212 Functional Gain - PPP3CC ENSG00000120910 CDS Human protein_coding chr8:22370883 chr8:22370886 nonsynonymous SNV 0.403 0 24 hm5C_associated_SNPs_118853 0 0 1 DDX24 POSTAR2 ENCODE chr8:22370884-22370928
64251 chr10 5138713 5138713 1 + C T COAD 5138712 + 5138692 5138732 41 GAGCAGGTTGGACTGGCCATCCGAAGCAAGATTGCAGATGG GAGCAGGTTGGACTGGCCATCTGAAGCAAGATTGCAGATGG < 41bp 0.513145576052437 0.73492994578467 0.3634637 0.33029717 prediction 0.443568739464466 Functional Gain - AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5138712 chr10:5138713 stopgain 0.019 0 22 hm5C_associated_SNPs_118857 0 0 2 BUD13 POSTAR2 ENCODE chr10:5138709-5138852
64251 chr22 38074613 38074613 1 + C T COAD 38074612 + 38074592 38074632 41 GGACGGCGGGGCCTGGGGGACCGAGCAGCGGGAGGCTGTCT GGACGGCGGGGCCTGGGGGACTGAGCAGCGGGAGGCTGTCT < 41bp 0.552700015627121 0.774466401639613 0.8279172 0.8733468 prediction 0.443532772024984 Functional Gain - LGALS1 ENSG00000100097 CDS Human protein_coding chr22:38074612 chr22:38074613 synonymous SNV . 0 22 hm5C_associated_SNPs_118864 0 0 4 DDX55 POSTAR2 ENCODE chr22:38074576-38074628
64251 chr22 29708456 29708456 1 + C A UCEC 29708455 + 29708435 29708475 41 GCATGCCCTGCACTCAGTCACCCCGAGGGCTGAGCCAGATT GCATGCCCTGCACTCAGTCACACCGAGGGCTGAGCCAGATT < 41bp 0.471772373740698 0.721754500152299 0.1809158 0.16706774 prediction 0.443509000304598 Functional Gain - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29708455 chr22:29708456 synonymous SNV . 0 22 hm5C_associated_SNPs_118871 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:29708444-29708465
64251 chr7 140402711 140402711 1 + C T SKCM 140402710 + 140402690 140402730 41 GCCCCGGTATAGACAGTTCCCCCAGCTGACCAGATCCCAGG GCCCCGGTATAGACAGTTCCCTCAGCTGACCAGATCCCAGG < 41bp 0.580166474292884 0.801902314228158 0.16732973 0.062562495 prediction 0.443471679870549 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140402710 chr7:140402711 synonymous SNV . 0 22 hm5C_associated_SNPs_118875 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:140402680-140402740
64251 chr11 65409819 65409819 1 + A G COAD 65409816 + 65409796 65409836 41 GCAGCGGAGGGGGCACCCTGCACAGCTACCGCGTCATCGTG GCAGCGGAGGGGGCACCCTGCACGGCTACCGCGTCATCGTG < 41bp 0.578945624071758 0.800677724340802 0.062121987 0.290114 prediction 0.443464200538087 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65409816 chr11:65409819 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_118876 0 0 2 BUD13 POSTAR2 ENCODE chr11:65409805-65409836
64251 chr15 23811752 23811752 1 + C A KIRC 23811748 + 23811728 23811768 41 GACATGTGTGGGCTGCAGACCTTGCACCCCATGGATGCTGC GACATGTGTGGGCTGCAGACCTTGAACCCCATGGATGCTGC < 41bp 0.310702582502353 0.721729139096527 0.07608464 0.11387095 prediction 0.443458278193053 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23811748 chr15:23811752 nonsynonymous SNV 0.020 4 25 hm5C_associated_SNPs_118878 0 0 1 RBM15 POSTAR2 ENCODE chr15:23811728-23811780
64251 chr16 53514570 53514570 1 + A G LIHC 53514567 + 53514547 53514587 41 CCTCCCACACCTACTCGCCTCACAGGTGCCAACAGTGACAT CCTCCCACACCTACTCGCCTCACGGGTGCCAACAGTGACAT < 41bp 0.486015685849437 0.721725437509595 0.0995554 0.34051484 prediction 0.44345087501919 Functional Gain - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53514567 chr16:53514570 synonymous SNV . 0 24 hm5C_associated_SNPs_118880 0 0 2 IGF2BP1 POSTAR2 ENCODE chr16:53514493-53514601
64251 chr19 54659044 54659044 1 + C G SARC 54659040 + 54659020 54659060 41 TCACTGACCGCCTTCTCCCCCGGCCAGGGCACCTACATCTA TCACTGACCGCCTTCTCCCCCGGCGAGGGCACCTACATCTA < 41bp 0.605596372833174 0.827311680439842 0.057841927 0.19727618 prediction 0.443430615213337 Functional Gain - CNOT3 ENSG00000088038 CDS Human protein_coding chr19:54659040 chr19:54659044 nonsynonymous SNV 0.991 1 25 hm5C_associated_SNPs_118883 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:54659043-54659065
64251 chr2 85662803 85662803 1 + C A UCEC 85662802 + 85662782 85662822 41 TCCACAGGATGGGGCCTATACCGTGCGCCCCAGCTCAGGGC TCCACAGGATGGGGCCTATACAGTGCGCCCCAGCTCAGGGC < 41bp 0.596366886170371 0.818077362384181 0.25969464 0.06044081 prediction 0.44342095242762 Functional Gain - SH2D6 ENSG00000152292 CDS Human protein_coding chr2:85662802 chr2:85662803 synonymous SNV . 0 22 hm5C_associated_SNPs_118884 0 0 1 SF3B1 POSTAR2 ENCODE chr2:85662769-85662812
64251 chr1 26146884 26146884 1 + C G rs984412 26146880 + 26146860 26146900 41 AAGGGCCGCTGGGCAGGCGGCGAGCACTTGGCCGACCTTGG AAGGGCCGCTGGGCAGGCGGCGAGGACTTGGCCGACCTTGG < 41bp 0.636062913427608 0.857765731852504 0.2644848 0.60336745 prediction 0.443405636849792 Functional Gain - LOC646471 ENSG00000223474 CDS Human other chr1:26146880 chr1:26146884 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_118885 0 0 2 DHX30 POSTAR2 ENCODE chr1:26146839-26146909
64251 chr17 30814912 30814912 1 + T C COAD 30814910 + 30814890 30814930 41 GAACCTGAAGAAGTCGCTGTCGTGCGCCAACCTGTCCACAT GAACCTGAAGAAGTCGCTGTCGCGCGCCAACCTGTCCACAT < 41bp 0.600943299861508 0.822644246115488 0.4432748 0.40654233 prediction 0.443401892507958 Functional Gain - CDK5R1 ENSG00000176749 CDS Human protein_coding chr17:30814910 chr17:30814912 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_118887 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr17:30814884-30814919
64251 chr6 160227020 160227020 1 + C T UCEC 160227019 + 160226999 160227039 41 ATGCGCCCATTTTCAGCTCTCCGGATAAAGACCAAATCAAG ATGCGCCCATTTTCAGCTCTCTGGATAAAGACCAAATCAAG < 41bp 0.570353682004645 0.792049089883542 0.815773 0.24494192 prediction 0.443390815757793 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160227019 chr6:160227020 nonsynonymous SNV 0.429 0 22 hm5C_associated_SNPs_118892 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:160227017-160227031
64251 chr8 37963091 37963091 1 + C A UCEC 37963090 + 37963070 37963110 41 TGGCGGCGGCAGGAGCAGGACCTGGCCAGGAAGCGGGTGCC TGGCGGCGGCAGGAGCAGGACATGGCCAGGAAGCGGGTGCC < 41bp 0.569496356084654 0.791182451425958 0.4594826 0.5486229 prediction 0.443372190682608 Functional Gain - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37963090 chr8:37963091 nonsynonymous SNV 0.005 1 22 hm5C_associated_SNPs_118895 0 0 5 DDX3X POSTAR2 ENCODE chr8:37963067-37963122
64251 chr4 952182 952182 1 + C T rs541630556 952181 + 952161 952201 41 GCTCGTGGGCCTGGCCCTGGCCACCCTGCGGGTCCTGCGGG GCTCGTGGGCCTGGCCCTGGCTACCCTGCGGGTCCTGCGGG < 41bp 0.496649380730829 0.72166833761967 0.21608502 0.26862925 prediction 0.44333667523934 Functional Gain - TMEM175 ENSG00000127419 CDS Human protein_coding chr4:952181 chr4:952182 synonymous SNV . 0 22 hm5C_associated_SNPs_118904 0 0 2 LSM11 POSTAR2 ENCODE chr4:952123-952213
64251 chr15 63881159 63881159 1 + C T UCEC 63881158 + 63881138 63881178 41 TGTAGCCTGAGAACAGTGGCCCGGAGAGCTGCCTGTATGAC TGTAGCCTGAGAACAGTGGCCTGGAGAGCTGCCTGTATGAC < 41bp 0.595178631111681 0.816840146120551 0.30447596 0.24128777 prediction 0.443323030017739 Functional Gain - USP3 ENSG00000140455 CDS Human protein_coding chr15:63881158 chr15:63881159 nonsynonymous SNV 0.181 3 22 hm5C_associated_SNPs_118905 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr15:63881143-63881169
64251 chr1 61872334 61872334 1 + C G SKCM 61872333 + 61872313 61872353 41 TGGCCAGGCCTGTGCCTCTGCCGGTGCCAGACACAAAGCCT TGGCCAGGCCTGTGCCTCTGCGGGTGCCAGACACAAAGCCT < 41bp 0.417188004328795 0.721658966315548 0.7044714 0.8725936 prediction 0.443317932631095 Functional Gain - NFIA ENSG00000162599 CDS Human protein_coding chr1:61872333 chr1:61872334 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118907 0 0 1 GRWD1 POSTAR2 ENCODE chr1:61872295-61872354
64251 chr4 129770210 129770210 1 + C A THCA 129770209 + 129770189 129770229 41 GTCATCAGGCTCTGAGCCTCCCGAGTTGGGCTATGTGGACA GTCATCAGGCTCTGAGCCTCCAGAGTTGGGCTATGTGGACA < 41bp 0.45874777214188 0.721651459403594 0.32180652 0.6011177 prediction 0.443302918807188 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129770209 chr4:129770210 synonymous SNV . 0 22 hm5C_associated_SNPs_118910 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:129770200-129770231
64251 chr14 103570385 103570385 1 + T C rs572934887 103570383 + 103570363 103570403 41 GAGAGCGACTACACCAGCTTCCTGGAGGTCAGGCCGGGCGG GAGAGCGACTACACCAGCTTCCCGGAGGTCAGGCCGGGCGG < 41bp 0.490171707019219 0.721640681788818 0.3433131 0.9100211 prediction 0.443281363577636 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103570383 chr14:103570385 nonsynonymous SNV 0.861 1 23 hm5C_associated_SNPs_118913 0 0 5 GRWD1 POSTAR2 ENCODE chr14:103570337-103570387
64251 chr3 51426377 51426377 1 + C T SKCM 51426376 + 51426356 51426396 41 ACAGTGGACCTGAAGAAGCTCCGAGTTAAAGAGCTGAAGAA ACAGTGGACCTGAAGAAGCTCTGAGTTAAAGAGCTGAAGAA < 41bp 0.523448258937767 0.745087222864891 0.10023394 0.042424858 prediction 0.443277927854248 Functional Gain - MANF ENSG00000145050 CDS Human protein_coding chr3:51426376 chr3:51426377 stopgain 0.980 1 22 hm5C_associated_SNPs_118914 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:51426337-51426381
64251 chr7 143000953 143000953 1 + C T rs372837731 143000952 + 143000932 143000972 41 TGGGTGCGAGGAGAGTGATGCCGGTAAAGAAAAGTTGCCGA TGGGTGCGAGGAGAGTGATGCTGGTAAAGAAAAGTTGCCGA < 41bp 0.473500088862564 0.721633344676685 0.83940744 0.83846104 prediction 0.443266689353371 Functional Gain - CASP2 ENSG00000106144 CDS Human protein_coding chr7:143000952 chr7:143000953 synonymous SNV . 0 22 hm5C_associated_SNPs_118917 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:143000881-143000956
64251 chr14 89075691 89075691 1 + C T UCEC 89075690 + 89075670 89075710 41 ATGATGCAAAGTGTACTAAACCAGATTGTCCCTTCACTCAT ATGATGCAAAGTGTACTAAACTAGATTGTCCCTTCACTCAT < 41bp 0.583153379492553 0.804784008862706 0.119258285 0.10617247 prediction 0.443261258740305 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89075690 chr14:89075691 nonsynonymous SNV 0.992 1 22 hm5C_associated_SNPs_118918 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:89075614-89075752
64251 chr2 15769797 15769797 1 + T C rs80285206 15769794 + 15769774 15769814 41 AGACTCAAGGAAGATGGAGGCTGTACCATATGGTACAACGA AGACTCAAGGAAGATGGAGGCTGCACCATATGGTACAACGA < 41bp 0.492268821708111 0.721600160629991 0.1499047 0.10544565 prediction 0.443200321259983 Functional Gain - DDX1 ENSG00000079785 CDS Human protein_coding chr2:15769794 chr2:15769797 synonymous SNV . 0 24 hm5C_associated_SNPs_118931 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:15769740-15769801
64251 chr2 190340017 190340017 1 + C A rs535803074 190340016 + 190339996 190340036 41 AGATGAAGAAAATGATTTTACCGAAAAAGTCCAGGATACAA AGATGAAGAAAATGATTTTACAGAAAAAGTCCAGGATACAA < 41bp 0.474441334090303 0.721586540279069 0.12534013 0.08862379 prediction 0.443173080558139 Functional Gain - WDR75 ENSG00000115368 CDS Human protein_coding chr2:190340016 chr2:190340017 synonymous SNV . 0 22 hm5C_associated_SNPs_118942 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:190339983-190340019
64251 chr5 133887748 133887748 1 + C T GBM 133887747 + 133887727 133887767 41 TCTTGCCCCTCACAGGTTTTCCGGACAGACTTGATCACAGC TCTTGCCCCTCACAGGTTTTCTGGACAGACTTGATCACAGC < 41bp 0.469553619246142 0.72157794716089 0.28845695 0.1523611 prediction 0.443155894321781 Functional Gain - JADE2 ENSG00000043143 CDS Human protein_coding chr5:133887747 chr5:133887748 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_118945 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:133887742-133887780
64251 chr1 848738 848738 1 + C A rs3829741 848737 + 848717 848757 41 CTTCTGAATGGGCCCTGTCCCCGGGGAGCCTCTGGTAAAGA CTTCTGAATGGGCCCTGTCCCAGGGGAGCCTCTGGTAAAGA < 41bp 0.565184558131421 0.786761515090954 0.91375816 0.94866204 prediction 0.443153913919065 Functional Gain - FAM41C;LOC100130417 ENSG00000230699 ncRNA_exonic Human lincRNA chr1:848737 chr1:848738 . . 0 22 hm5C_associated_SNPs_118947 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:848720-848760
64251 chr3 99895255 99895255 1 + C T UCEC 99895254 + 99895234 99895274 41 TGAGGAGAATGATGGACATTCCCGAGGTACCACGTAACCAG TGAGGAGAATGATGGACATTCTCGAGGTACCACGTAACCAG < 41bp 0.540045929867181 0.761621901665813 0.18734512 0.06178677 prediction 0.443151943597265 Functional Gain - CMSS1 ENSG00000184220 CDS Human protein_coding chr3:99895254 chr3:99895255 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_118948 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:99895233-99895259
64251 chr1 9416617 9416617 1 + C T UCEC 9416616 + 9416596 9416636 41 GTCTGGGGCCACTGTGAGATCCGAATGCGCTACTTGAACGG GTCTGGGGCCACTGTGAGATCTGAATGCGCTACTTGAACGG < 41bp 0.580753047091253 0.802325163893773 0.14326054 0.1377526 prediction 0.44314423360504 Functional Gain - SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416616 chr1:9416617 stopgain 1.000 1 22 hm5C_associated_SNPs_118950 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9416603-9416630
64251 chr16 15489650 15489650 1 + C G rs146855497 15489649 + 15489629 15489669 41 GGAGGGGGCAGATGCAGGTGCCGGCTGCTGCAGTGCAGTAG GGAGGGGGCAGATGCAGGTGCGGGCTGCTGCAGTGCAGTAG < 41bp 0.640478471269457 0.862044414456852 0.87979937 0.9061847 prediction 0.443131886374791 Functional Gain - MPV17L ENSG00000156968;ENSG00000261130 UTR5 Human other chr16:15489649 chr16:15489650 . . 0 22 hm5C_associated_SNPs_118954 0 0 4 DDX3X POSTAR2 ENCODE chr16:15489641-15489662
64251 chr20 1115847 1115847 1 + A G UCEC 1115844 + 1115824 1115864 41 CCATGAGCAGTGGGAAAAGGCTAATGTAAGCAGTCCCCACC CCATGAGCAGTGGGAAAAGGCTAGTGTAAGCAGTCCCCACC < 41bp 0.566450561874179 0.788012023233957 0.25109026 0.30791718 prediction 0.443122922719556 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1115844 chr20:1115847 nonsynonymous SNV 0.038 0 24 hm5C_associated_SNPs_118956 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:1115796-1115849
64251 chr2 171572854 171572854 1 + C A UCEC 171572850 + 171572830 171572870 41 CCACCTGTAGCCGCATCGGCCAGCCGGGCGCGGCGGCGCCC CCACCTGTAGCCGCATCGGCCAGCAGGGCGCGGCGGCGCCC < 41bp 0.704283209556122 0.925841761501789 0.81629884 0.85359 prediction 0.443117103891333 Functional Gain - SP5 ENSG00000204335 CDS Human protein_coding chr2:171572850 chr2:171572854 nonsynonymous SNV 0.633 0 25 hm5C_associated_SNPs_118958 0 0 3 DDX3X POSTAR2 ENCODE chr2:171572773-171572894
64251 chr8 86389423 86389423 1 + A G LUAD 86389420 + 86389400 86389440 41 TCCTTGGATTACTGGACCTACCCAGGCTCACTGACCACCCC TCCTTGGATTACTGGACCTACCCGGGCTCACTGACCACCCC < 41bp 0.543163341373289 0.764717003125407 0.0913842 0.53258705 prediction 0.443107323504236 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86389420 chr8:86389423 synonymous SNV . 0 24 hm5C_associated_SNPs_118959 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:86389372-86389474
64251 chr4 83956360 83956360 1 + C A rs541775007 83956356 + 83956336 83956376 41 GCTGCCAGAGGCCCCCGCATCCACCGCTGAGCTGGGAGAAA GCTGCCAGAGGCCCCCGCATCCACAGCTGAGCTGGGAGAAA < 41bp 0.440347656299483 0.721541202090276 0.14618322 0.19873703 prediction 0.443082404180553 Functional Gain - COPS4 ENSG00000138663 UTR5 Human protein_coding chr4:83956356 chr4:83956360 . . 0 25 hm5C_associated_SNPs_118961 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819213 chr4:83956360-83956380
64251 chr19 5653155 5653155 1 + C T SKCM 5653154 + 5653134 5653174 41 CGCCAAGGTTGTGACAAATGCCCGGAGTCCTGGAGCTCGCT CGCCAAGGTTGTGACAAATGCTCGGAGTCCTGGAGCTCGCT < 41bp 0.454788447658843 0.721541089650459 0.53623265 0.34170842 prediction 0.443082179300918 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5653154 chr19:5653155 synonymous SNV . 0 22 hm5C_associated_SNPs_118962 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:5653120-5653180
64251 chr1 228345508 228345508 1 + C A LUAD 228345507 + 228345487 228345527 41 ACGCGGCTGCTGGAGGAGATCCACAACCACTCCACCTTCGT ACGCGGCTGCTGGAGGAGATCAACAACCACTCCACCTTCGT < 41bp 0.466226472584971 0.721536372297425 0.1366454 0.1490219 prediction 0.443072744594849 Functional Gain - GJC2 ENSG00000198835 CDS Human protein_coding chr1:228345507 chr1:228345508 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_118963 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:228345504-228345530
64251 chr19 10398421 10398421 1 + C A MESO 10398420 + 10398400 10398440 41 TACGAGTTTGCTGCTGGACCCCGCGACTTCTGGCAGCCCGT TACGAGTTTGCTGCTGGACCCAGCGACTTCTGGCAGCCCGT < 41bp 0.593267024104601 0.814801521526441 0.058859825 0.34127057 prediction 0.44306899484368 Functional Gain - ICAM4 ENSG00000105371 CDS Human protein_coding chr19:10398420 chr19:10398421 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_118965 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:10398396-10398422
64251 chr8 145745766 145745766 1 + T C STAD 145745764 + 145745744 145745784 41 AGCAGGGTGGGGCCGCAGAGCCTGGGCCAGCCCCCATCCCC AGCAGGGTGGGGCCGCAGAGCCCGGGCCAGCCCCCATCCCC < 41bp 0.559808837038068 0.781341935723064 0.45266953 0.626355 prediction 0.443066197369993 Functional Gain - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745764 chr8:145745766 synonymous SNV . 0 23 hm5C_associated_SNPs_118966 0 0 1 EIF3H POSTAR2 ENCODE chr8:145745743-145745809
64251 chr19 991108 991108 1 + C A ESCA 991107 + 991087 991127 41 CAGAGGGAGAGGAGCTTCCACCCAGAGCAGGACGCCGGGAA CAGAGGGAGAGGAGCTTCCACACAGAGCAGGACGCCGGGAA < 41bp 0.45519784589806 0.721527659408267 0.38935935 0.23337191 prediction 0.443055318816534 Functional Gain - WDR18 ENSG00000065268 CDS Human protein_coding chr19:991107 chr19:991108 nonsynonymous SNV 0.948 0 22 hm5C_associated_SNPs_118969 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:991080-991113
64251 chr1 53323115 53323115 1 + A G UCEC 53323112 + 53323092 53323132 41 AAGGATCGATTGAAGTCTCTCACAATGCACTATCTGAAATG AAGGATCGATTGAAGTCTCTCACGATGCACTATCTGAAATG < 41bp 0.476732149130884 0.721512720535925 0.034312576 0.07234186 prediction 0.443025441071849 Functional Gain - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53323112 chr1:53323115 synonymous SNV . 0 24 hm5C_associated_SNPs_118972 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:53323079-53323117
64251 chr8 97797306 97797306 1 + A G UCEC 97797303 + 97797283 97797323 41 TAGCTGTTTATGGTAAAGCCCAGAACAGATCCTATGAGCGA TAGCTGTTTATGGTAAAGCCCAGGACAGATCCTATGAGCGA < 41bp 0.511672143152959 0.733178999650647 0.2818318 0.413355 prediction 0.443013712995376 Functional Gain - CPQ ENSG00000104324 CDS Human protein_coding chr8:97797303 chr8:97797306 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_118975 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:97797275-97797307
64251 chr5 109025816 109025816 1 + C G rs116535370 109025812 + 109025792 109025832 41 CTCCGCCTGCCCCGCGCGCCCTGCCGGAGGTCGGCGCTGAG CTCCGCCTGCCCCGCGCGCCCTGCGGGAGGTCGGCGCTGAG < 41bp 0.561139799861577 0.782643599816035 0.16806981 0.37385365 prediction 0.443007599908916 Functional Gain - MAN2A1 ENSG00000112893 UTR5 Human protein_coding chr5:109025812 chr5:109025816 . . 0 25 hm5C_associated_SNPs_118976 0 0 5 DDX3X POSTAR2 ENCODE chr5:109025745-109025831
64251 chr6 64422504 64422504 1 + C T LUAD 64422503 + 64422483 64422523 41 AGCAAAGATGGAGATAGTTGCCGGAATGGAGAAAAACACAT AGCAAAGATGGAGATAGTTGCTGGAATGGAGAAAAACACAT < 41bp 0.558107947320198 0.779610551225176 0.092025936 0.20448297 prediction 0.443005207809956 Functional Gain - PHF3 ENSG00000118482 CDS Human protein_coding chr6:64422503 chr6:64422504 nonsynonymous SNV 0.917 1 22 hm5C_associated_SNPs_118977 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64422486-64422617
64251 chr22 42059692 42059692 1 + T C UCEC 42059690 + 42059670 42059710 41 GAAGAGGAGCTGAAGACCCACATCAGCAAGGGTACGCTGGG GAAGAGGAGCTGAAGACCCACACCAGCAAGGGTACGCTGGG < 41bp 0.61761223734346 0.83910968927235 0.06932598 0.09433204 prediction 0.442994903857779 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42059690 chr22:42059692 nonsynonymous SNV 0.149 0 23 hm5C_associated_SNPs_118979 0 0 15 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:42059678-42059708
64251 chr20 39987498 39987498 1 + C T rs528815411 39987497 + 39987477 39987517 41 CCTGCTGTGGACCTTGATACCCTGGACTGAACCTGCCCTGG CCTGCTGTGGACCTTGATACCTTGGACTGAACCTGCCCTGG < 41bp 0.507152108990162 0.728638788291709 0.36085472 0.32612047 prediction 0.442973358603094 Functional Gain - LPIN3 ENSG00000132793 CDS Human protein_coding chr20:39987497 chr20:39987498 synonymous SNV . 0 22 hm5C_associated_SNPs_118980 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:39987477-39987513
64251 chr2 113317018 113317018 1 + C A UCEC 113317017 + 113316997 113317037 41 ACGCAGGCTGCTGCCAGAGTCCTGGGGCTTCCTTTGTCCCG ACGCAGGCTGCTGCCAGAGTCATGGGGCTTCCTTTGTCCCG < 41bp 0.460162141831291 0.721484203342399 0.5758947 0.87749577 prediction 0.442968406684799 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113317017 chr2:113317018 synonymous SNV . 0 22 hm5C_associated_SNPs_118983 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:113317009-113317032
64251 chr1 181059004 181059004 1 + A G STAD 181059001 + 181058981 181059021 41 AGAGACATGAACCCCTGGAGCACAGCCATCGTGGCCTTCTG AGAGACATGAACCCCTGGAGCACGGCCATCGTGGCCTTCTG < 41bp 0.47800397768212 0.721482048156106 0.2800395 0.43309382 prediction 0.442964096312211 Functional Gain - IER5 ENSG00000162783 CDS Human protein_coding chr1:181059001 chr1:181059004 synonymous SNV . 0 24 hm5C_associated_SNPs_118984 0 0 3 UCHL5 POSTAR2 ENCODE chr1:181058929-181059012
64251 chr16 106609 106609 1 + C T UCEC 106608 + 106588 106628 41 ACGGAAGACAGAAAGAAGCTCCGAGAGTAAGTGCCGGCCAC ACGGAAGACAGAAAGAAGCTCTGAGAGTAAGTGCCGGCCAC < 41bp 0.553368360209889 0.774846592822934 0.38958058 0.2922184 prediction 0.442956465226091 Functional Gain - SNRNP25 ENSG00000161981 CDS Human protein_coding chr16:106608 chr16:106609 stopgain 0.984 1 22 hm5C_associated_SNPs_118985 0 0 2 SF3B4 POSTAR2 ENCODE chr16:106516-106612
64251 chr6 158450035 158450035 1 + T G HNSC 158450032 + 158450012 158450052 41 CAGAAGCAGGGGGATGACAGCTCTGAATGGGGGAACTCCTT CAGAAGCAGGGGGATGACAGCTCGGAATGGGGGAACTCCTT < 41bp 0.334070401405526 0.721478043478896 0.28735572 0.41112348 prediction 0.442956086957792 Functional Gain - SYNJ2 ENSG00000078269 CDS Human protein_coding chr6:158450032 chr6:158450035 synonymous SNV . 0 24 hm5C_associated_SNPs_118986 0 0 3 BUD13 POSTAR2 ENCODE chr6:158450007-158450151
64251 chr12 69746053 69746053 1 + C T HNSC 69746052 + 69746032 69746072 41 GCTTGTGCAAAGAGGGTTGTCCGTGATCCACAAGGCATTAG GCTTGTGCAAAGAGGGTTGTCTGTGATCCACAAGGCATTAG < 41bp 0.494157394059925 0.721477398285924 0.10001212 0.06184709 prediction 0.442954796571847 Functional Gain - LYZ ENSG00000090382 CDS Human protein_coding chr12:69746052 chr12:69746053 nonsynonymous SNV 0.078 1 22 hm5C_associated_SNPs_118987 0 0 7 BCCIP POSTAR2 ENCODE chr12:69746046-69746079
64251 chr2 45169591 45169591 1 + C T CESC 45169590 + 45169570 45169610 41 CCGCTTCCTCTGGTCGCTGCCCGTGGCCCCCGGGGCGTGCG CCGCTTCCTCTGGTCGCTGCCTGTGGCCCCCGGGGCGTGCG < 41bp 0.531230593404563 0.752706391141573 0.10239273 0.07112491 prediction 0.44295159547402 Functional Gain - SIX3 ENSG00000138083 CDS Human protein_coding chr2:45169590 chr2:45169591 synonymous SNV . 0 22 hm5C_associated_SNPs_118988 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:45169569-45169595
64251 chr12 131356862 131356862 1 + C A rs7970825 131356858 + 131356838 131356878 41 GCGTGGGGTCGGCGCTAGCCCCCGCGAACCCCCGTTTCATC GCGTGGGGTCGGCGCTAGCCCCCGAGAACCCCCGTTTCATC < 41bp 0.681489005256931 0.902951198870296 0.36684036 0.21201992 prediction 0.44292438722673 Functional Gain - RAN ENSG00000132341 UTR5 Human protein_coding chr12:131356858 chr12:131356862 . . 0 25 hm5C_associated_SNPs_118993 0 0 3 CSTF2T POSTAR2 ENCODE chr12:131356752-131356864
64251 chr19 2248017 2248017 1 + C G rs531779909 2248016 + 2247996 2248036 41 GCCAGCTCCAGGGGTCCACCCCCCGGCCCCAGTGGTGCATC GCCAGCTCCAGGGGTCCACCCGCCGGCCCCAGTGGTGCATC < 41bp 0.658937238535731 0.880394356512424 0.35773844 0.44589898 prediction 0.442914235953386 Functional Gain - SF3A2 ENSG00000104897 CDS Human protein_coding chr19:2248016 chr19:2248017 synonymous SNV . 0 22 hm5C_associated_SNPs_118994 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:2247985-2248043
64251 chr20 61467648 61467648 1 + C A LUSC 61467647 + 61467627 61467667 41 CTCTGGGCCTGCAGGGCGTCCCGGGTGTTCCTGGCATCACG CTCTGGGCCTGCAGGGCGTCCAGGGTGTTCCTGGCATCACG < 41bp 0.602473278738541 0.823921676187406 0.92345595 0.9242038 prediction 0.442896794897731 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61467647 chr20:61467648 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_119001 0 0 1 RPS3 POSTAR2 ENCODE chr20:61467606-61467659
64251 chr19 49377346 49377346 1 + C T SKCM 49377345 + 49377325 49377365 41 ACTGGGAAAGGAGAAGCTGCCCCAGGGCCGCAATCCTCAGC ACTGGGAAAGGAGAAGCTGCCTCAGGGCCGCAATCCTCAGC < 41bp 0.569494050389865 0.79093207123469 0.3837997 0.1264312 prediction 0.44287604168965 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377345 chr19:49377346 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_119006 0 0 8 FXR1 POSTAR2 ENCODE chr19:49377319-49377355
64251 chr19 11559801 11559801 1 + T C rs139144555 11559799 + 11559779 11559819 41 TCGGGGGCTCTCCCACCAGCCTTGGGTGAGTGGCTTGGGCT TCGGGGGCTCTCCCACCAGCCTCGGGTGAGTGGCTTGGGCT < 41bp 0.609660588180955 0.831088834346242 0.4518703 0.6533258 prediction 0.442856492330573 Functional Gain - PRKCSH ENSG00000130175 CDS Human protein_coding chr19:11559799 chr19:11559801 synonymous SNV . 0 23 hm5C_associated_SNPs_119010 2 0 3 SND1 POSTAR2 ENCODE chr19:11559783-11559803
64251 chr17 46628485 46628485 1 + C A rs544041703 46628481 + 46628461 46628501 41 TCCCCCGCCGCCGCCGCCACCGCCCCCGCTGCCACCACTGC TCCCCCGCCGCCGCCGCCACCGCCACCGCTGCCACCACTGC < 41bp 0.701134954508132 0.922555621215543 0.28274685 0.44257134 prediction 0.442841333414822 Functional Gain - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628481 chr17:46628485 synonymous SNV . 0 25 hm5C_associated_SNPs_119011 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chrX 48432832 48432832 1 + C G rs782420631 48432828 + 48432808 48432848 41 AATCAGCACGCACGCCGGGACGCGCAAGGGGAACGTTCCGG AATCAGCACGCACGCCGGGACGCGGAAGGGGAACGTTCCGG < 41bp 0.622972890849949 0.84439052463717 0.14675269 0.39632744 prediction 0.442835267574442 Functional Gain - RBM3 ENSG00000204620 UTR3 Human antisense chrX:48432828 chrX:48432832 . . 0 25 hm5C_associated_SNPs_119012 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:48432832-48432833
64251 chr14 24909598 24909598 1 - G T UCEC 24909599 - 24909579 24909619 41 CTCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACC CTCAGGCCACCAATTCTTCCCATGGATACACATCGGGGACC < 41bp 0.454189110667123 0.721410469773331 0.033042192 0.18569896 prediction 0.442820939546662 Functional Gain - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909599 chr14:24909598 synonymous SNV . 0 22 hm5C_associated_SNPs_119013 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24909572-24909651
64251 chr20 61442929 61442929 1 + A G rs144253683 61442926 + 61442906 61442946 41 CACGGGCACGGTGGGCCGAGCACAGAACTACCAGAAGCGCT CACGGGCACGGTGGGCCGAGCACGGAACTACCAGAAGCGCT < 41bp 0.471015533006519 0.721408307283277 0.16307229 0.53293246 prediction 0.442816614566555 Functional Gain - OGFR ENSG00000060491 CDS Human protein_coding chr20:61442926 chr20:61442929 nonsynonymous SNV 0.645 0 24 hm5C_associated_SNPs_119014 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:61442920-61442940
64251 chr20 61588815 61588815 1 + C G ESCA 61588814 + 61588794 61588834 41 ATTGGGGGTGAGAAGGTCATCCTGCTGTCAGCCTCTGCCTG ATTGGGGGTGAGAAGGTCATCGTGCTGTCAGCCTCTGCCTG < 41bp 0.397916065571436 0.721395196253426 0.406231 0.723649 prediction 0.442790392506852 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61588814 chr20:61588815 nonsynonymous SNV 0.689 0 22 hm5C_associated_SNPs_119019 0 0 4 EFTUD2 POSTAR2 ENCODE chr20:61588758-61588846
64251 chr9 95376594 95376594 1 - T C rs7024536 95376597 - 95376577 95376617 41 GCCGTTGAGTACTGTCTTGACCCAAGGGAGTTCACTGTTGC GCCGTTGAGTACTGTCTTGACCCGAGGGAGTTCACTGTTGC < 41bp 0.511119914993453 0.732510910644507 0.110016674 0.28169578 prediction 0.442781991302107 Functional Gain - CENPP;IPPK ENSG00000127080;ENSG00000188312 UTR3 Human other chr9:95376597 chr9:95376594 . . 0 24 hm5C_associated_SNPs_119021 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr9:95376564-95376602
64251 chr12 69644996 69644996 1 + C T UCEC 69644995 + 69644975 69645015 41 AATGGAGATGCCCCAGAAGACCGAGATTACATGGATACTCT AATGGAGATGCCCCAGAAGACTGAGATTACATGGATACTCT < 41bp 0.483896715455127 0.721388093006458 0.2942878 0.21508348 prediction 0.442776186012916 Functional Gain - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69644995 chr12:69644996 stopgain 0.955 1 22 hm5C_associated_SNPs_119022 0 0 20 CPSF6 POSTAR2 GSE37401,GSM917664 chr12:69644900-69645040
64251 chr12 52448451 52448451 1 + C T UCEC 52448450 + 52448430 52448470 41 CCAGGTGTACGGCTGCTACCCCGGCCCCCTGAGCGGCCCAG CCAGGTGTACGGCTGCTACCCTGGCCCCCTGAGCGGCCCAG < 41bp 0.487674824103961 0.721386538420524 0.87136316 0.8210341 prediction 0.442773076841048 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448450 chr12:52448451 synonymous SNV . 0 22 hm5C_associated_SNPs_119023 0 0 1 PCBP2 POSTAR2 ENCODE chr12:52448355-52448459
64251 chr14 29237068 29237068 1 + C T HNSC 29237067 + 29237047 29237087 41 GCGCTCATCATGATGGCCATCCGGCAGAGCCCCGAGAAGCG GCGCTCATCATGATGGCCATCTGGCAGAGCCCCGAGAAGCG < 41bp 0.491201416828098 0.721385297790216 0.22608879 0.075674176 prediction 0.442770595580431 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237067 chr14:29237068 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_119024 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:29237046-29237082
64251 chr11 57235267 57235267 1 + C T STAD 57235266 + 57235246 57235286 41 TTCCTGCAGAACAACCTCATCCGCACGCTGCGGCCAGGCAC TTCCTGCAGAACAACCTCATCTGCACGCTGCGGCCAGGCAC < 41bp 0.583755872736738 0.805138117054858 0.18402067 0.21316054 prediction 0.442764488636239 Functional Gain - RTN4RL2 ENSG00000186907 CDS Human protein_coding chr11:57235266 chr11:57235267 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_119025 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:57235212-57235268
64251 chr12 57974895 57974895 1 + C A LUSC 57974894 + 57974874 57974914 41 CGGTACCAGCAGGAGGTGGACCGCATCAAGGAGGCCGTTCG CGGTACCAGCAGGAGGTGGACAGCATCAAGGAGGCCGTTCG < 41bp 0.599273168850467 0.820649892452634 0.57945377 0.56065136 prediction 0.442753447204334 Functional Gain - KIF5A ENSG00000155980 CDS Human protein_coding chr12:57974894 chr12:57974895 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119027 0 0 2 UCHL5 POSTAR2 ENCODE chr12:57974842-57974911
64251 chr4 25317003 25317003 1 + C A THCA 25317002 + 25316982 25317022 41 AGATGTCAGCCTCCCCTGTCCCGAACGCAGTGTGTGGAAAG AGATGTCAGCCTCCCCTGTCCAGAACGCAGTGTGTGGAAAG < 41bp 0.459592351817993 0.721373126664078 0.115765065 0.1536617 prediction 0.442746253328156 Functional Gain - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25317002 chr4:25317003 synonymous SNV . 0 22 hm5C_associated_SNPs_119028 0 0 3 GRWD1 POSTAR2 ENCODE chr4:25316986-25317027
64251 chr19 47634313 47634313 1 + T G rs177918 47634310 + 47634290 47634330 41 GGGCCGGCGCGGCTTGAGGCCGCTAGGGTCTGGAGGGGGCG GGGCCGGCGCGGCTTGAGGCCGCGAGGGTCTGGAGGGGGCG < 41bp 0.703268767771405 0.924630798887379 0.36981183 0.5892198 prediction 0.442724062231948 Functional Gain - SAE1 ENSG00000142230 CDS Human protein_coding chr19:47634310 chr19:47634313 synonymous SNV . 0 24 hm5C_associated_SNPs_119034 0 0 3 DGCR8 POSTAR2 ENCODE chr19:47634283-47634326
64251 chr3 129221686 129221686 1 + C T SKCM 129221685 + 129221665 129221705 41 GAAGATGGGTGACCTCAAGTCCCTGGTGCAGCTGCACGTGG GAAGATGGGTGACCTCAAGTCTCTGGTGCAGCTGCACGTGG < 41bp 0.468220104120719 0.721361047152305 0.26505098 0.2874508 prediction 0.44272209430461 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129221685 chr3:129221686 synonymous SNV . 0 22 hm5C_associated_SNPs_119035 0 0 1 PPIG POSTAR2 ENCODE chr3:129221661-129221746
64251 chr19 10742306 10742306 1 + C T SKCM 10742305 + 10742285 10742325 41 TCCTCTGCTCCATGCAGTGGCCCGGAGATGCTTCCCCGCTA TCCTCTGCTCCATGCAGTGGCTCGGAGATGCTTCCCCGCTA < 41bp 0.581662019228504 0.803016924909045 0.3503464 0.16216597 prediction 0.442709811361081 Functional Gain - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10742305 chr19:10742306 synonymous SNV . 0 22 hm5C_associated_SNPs_119040 0 0 1 DDX24 POSTAR2 ENCODE chr19:10742303-10742359
64251 chr16 2818220 2818220 1 + A G LIHC 2818217 + 2818197 2818237 41 TGGCTCCAGTTCTAGTGACTCAGAGGGCTCTAGCCTTCCTG TGGCTCCAGTTCTAGTGACTCAGGGGGCTCTAGCCTTCCTG < 41bp 0.560055109468255 0.781404029505315 0.9245438 0.9516228 prediction 0.442697840074121 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2818217 chr16:2818220 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_119042 0 0 47 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:2818100-2818220
64251 chr12 9720220 9720220 1 + A G rs377765612 9720217 + 9720197 9720237 41 CTTCTTGGACACCTAAAACCCACAGTCCTCCACTTGGGTCC CTTCTTGGACACCTAAAACCCACGGTCCTCCACTTGGGTCC < 41bp 0.491042134282242 0.72133689254283 0.10024223 0.36302382 prediction 0.442673785085661 Functional Gain - DDX12P;KLRB1 ENSG00000214776 ncRNA_exonic Human protein_coding chr12:9720217 chr12:9720220 . . 0 24 hm5C_associated_SNPs_119045 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:9720219-9720257
64251 chr1 52248269 52248269 1 + A G rs549736209 52248266 + 52248246 52248286 41 GGACCAGTTCCCTGGGTTTCCAAAAACAGTGTAACATTTGT GGACCAGTTCCCTGGGTTTCCAAGAACAGTGTAACATTTGT < 41bp 0.504901548342236 0.726217499041283 0.75576234 0.7318974 prediction 0.442631901398093 Functional Gain - OSBPL9 ENSG00000117859 CDS Human protein_coding chr1:52248266 chr1:52248269 synonymous SNV . 0 24 hm5C_associated_SNPs_119051 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:52248269-52248306
64251 chr12 68043673 68043673 1 + C T GBM 68043672 + 68043652 68043692 41 TGGGGACTGGCCCGCCCTCCCCCATCGCCCTGCCGCCTCTC TGGGGACTGGCCCGCCCTCCCTCATCGCCCTGCCGCCTCTC < 41bp 0.582273363286871 0.803584977330754 0.26884466 0.22895992 prediction 0.442623228087765 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68043672 chr12:68043673 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_119054 0 0 1 XRN2 POSTAR2 ENCODE chr12:68043640-68043698
64251 chr16 87678294 87678294 1 + C G rs140676785 87678293 + 87678273 87678313 41 CAGCCTGGGCGAGGCTGAGGCCGAGCTGGCGGTCATCGAGG CAGCCTGGGCGAGGCTGAGGCGGAGCTGGCGGTCATCGAGG < 41bp 0.396184199219589 0.721308424156374 0.35116792 0.9310018 prediction 0.442616848312749 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678293 chr16:87678294 synonymous SNV . 0 22 hm5C_associated_SNPs_119055 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:87678283-87678310
64251 chr2 207655353 207655353 1 + A G ACC 207655350 + 207655330 207655370 41 TGTTTGGGTTCAAGCCACCCCAGAGGATTCCTTGCTATGAA TGTTTGGGTTCAAGCCACCCCAGGGGATTCCTTGCTATGAA < 41bp 0.543282936760644 0.764584170596221 0.45388567 0.87059677 prediction 0.442602467671154 Functional Gain - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207655350 chr2:207655353 synonymous SNV . 0 24 hm5C_associated_SNPs_119057 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207655325-207655363
64251 chr18 51888235 51888235 1 + A G STAD 51888232 + 51888212 51888252 41 ATTGGACATTGAGAAGAATCCACATTTTCAAGGACCCTACA ATTGGACATTGAGAAGAATCCACGTTTTCAAGGACCCTACA < 41bp 0.495330810880375 0.721300956777723 0.049162924 0.23794499 prediction 0.442601913555445 Functional Gain - C18orf54 ENSG00000166845 CDS Human protein_coding chr18:51888232 chr18:51888235 nonsynonymous SNV 0.114 0 24 hm5C_associated_SNPs_119058 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr18:51888220-51888240
64251 chrX 48121246 48121246 1 + C T UCEC 48121245 + 48121225 48121265 41 GCAGGCTCCACAGAATCATCCCGAAGGTGAGTATCTCTCAA GCAGGCTCCACAGAATCATCCTGAAGGTGAGTATCTCTCAA < 41bp 0.551135463580541 0.772436166867155 0.09004098 0.17677057 prediction 0.442601406573228 Functional Gain - SSX1 ENSG00000126752 CDS Human protein_coding chrX:48121245 chrX:48121246 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_119059 0 0 1 ZNF622 POSTAR2 ENCODE chrX:48121201-48121248
64251 chr9 140508890 140508890 1 + C T SKCM 140508889 + 140508869 140508909 41 CCTTGCCCCAGTCGGCCCTGCCGGGCTGCAGCCTCATCCAC CCTTGCCCCAGTCGGCCCTGCTGGGCTGCAGCCTCATCCAC < 41bp 0.565315488515477 0.786615076207489 0.4907755 0.3149345 prediction 0.442599175384023 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508889 chr9:140508890 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_119060 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:140508855-140508903
64251 chr8 31015025 31015025 1 + C A PRAD 31015024 + 31015004 31015044 41 AAGATTATTGCTGATGTTATCCGAAACCCTCCCGTCAACTC AAGATTATTGCTGATGTTATCAGAAACCCTCCCGTCAACTC < 41bp 0.593891608470462 0.815178375503721 0.7457703 0.9026219 prediction 0.442573534066519 Functional Gain - WRN ENSG00000165392 CDS Human protein_coding chr8:31015024 chr8:31015025 synonymous SNV . 0 22 hm5C_associated_SNPs_119067 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:31014993-31015031
64251 chr8 146280537 146280537 1 + C G rs528316398 146280536 + 146280516 146280556 41 GGTGGCAAGCCACCCAGGTGCCGAGGAAAGAGACTGAGGGC GGTGGCAAGCCACCCAGGTGCGGAGGAAAGAGACTGAGGGC < 41bp 0.638475378480727 0.859755720914008 0.5646081 0.91498387 prediction 0.442560684866562 Functional Gain - C8orf33 ENSG00000182307 UTR3 Human protein_coding chr8:146280536 chr8:146280537 . . 0 22 hm5C_associated_SNPs_119069 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146280284-146280555
64251 chr1 35853198 35853198 1 + T C SARC 35853195 + 35853175 35853215 41 TCAGGTGCTGACAAGTCATTCTGTAGTGAAGGTAAAGACAG TCAGGTGCTGACAAGTCATTCTGCAGTGAAGGTAAAGACAG < 41bp 0.508445413360018 0.729717484043876 0.116693616 0.24948367 prediction 0.442544141367717 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35853195 chr1:35853198 synonymous SNV . 0 24 hm5C_associated_SNPs_119075 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:35853059-35853259
64251 chr19 35741297 35741297 1 + T C STAD 35741294 + 35741274 35741314 41 TTCCAGCCTGTGACCCTGCCCTGTACCTACCAGATGACCTC TTCCAGCCTGTGACCCTGCCCTGCACCTACCAGATGACCTC < 41bp 0.508371679581188 0.729642023165917 0.09099737 0.11389583 prediction 0.442540687169458 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35741294 chr19:35741297 synonymous SNV . 0 24 hm5C_associated_SNPs_119077 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:35741260-35741300
64251 chr3 100467130 100467130 1 + C A UCEC 100467129 + 100467109 100467149 41 GCTCAGCCGCCACAGCAGTACCAGGCGAGCAATTATCCTGC GCTCAGCCGCCACAGCAGTACAAGGCGAGCAATTATCCTGC < 41bp 0.587745914319677 0.809014967158684 0.0983119 0.07532987 prediction 0.442538105678014 Functional Gain - TFG ENSG00000114354 CDS Human protein_coding chr3:100467129 chr3:100467130 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_119078 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr3:100467112-100467145
64251 chrX 152036194 152036194 1 + C T BRCA 152036193 + 152036173 152036213 41 CTGGCGGCAGAGCAGCTCTCCCGAGACTCGACACTGGGTGG CTGGCGGCAGAGCAGCTCTCCTGAGACTCGACACTGGGTGG < 41bp 0.485799970409213 0.721263471373967 0.4184816 0.6077391 prediction 0.442526942747933 Functional Gain - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152036193 chrX:152036194 stopgain 0.243 0 22 hm5C_associated_SNPs_119082 0 0 1 RPS3 POSTAR2 ENCODE chrX:152036175-152036208
64251 chr3 152880819 152880819 1 + C T rs374814696 152880818 + 152880798 152880838 41 TACGAGCGCGTGCCCATGATCCTGGTGGGCAACAAGGTGGA TACGAGCGCGTGCCCATGATCTTGGTGGGCAACAAGGTGGA < 41bp 0.515044322271209 0.736302254383941 0.8445697 0.5754365 prediction 0.442515864225463 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880818 chr3:152880819 synonymous SNV . 0 22 hm5C_associated_SNPs_119085 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr3:152880779-152880821
64251 chr16 29816260 29816260 1 + C A BLCA 29816256 + 29816236 29816276 41 GGATCTGCTGAACGAAGGCTCAGCCCGAGATCTCCGCAGTC GGATCTGCTGAACGAAGGCTCAGCACGAGATCTCCGCAGTC < 41bp 0.304268099395327 0.721230996387016 0.13538727 0.17791352 prediction 0.442461992774032 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816256 chr16:29816260 synonymous SNV . 0 25 hm5C_associated_SNPs_119094 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:29816226-29816264
64251 chr2 206610567 206610567 1 + C G OV 206610566 + 206610546 206610586 41 TATACCCGGAGAGGTGGTCGCCGGCGGGGATTGGGATGCGG TATACCCGGAGAGGTGGTCGCGGGCGGGGATTGGGATGCGG < 41bp 0.403777328909061 0.721227460828632 0.87375283 0.9105945 prediction 0.442454921657265 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206610566 chr2:206610567 nonsynonymous SNV 0.345 4 22 hm5C_associated_SNPs_119095 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:206610562-206610583
64251 chr7 102110270 102110270 1 + C T COAD 102110269 + 102110249 102110289 41 CCCGGACGCCCGCCTGCTGGCCGGCTGCGAGGGCGGCTGCT CCCGGACGCCCGCCTGCTGGCTGGCTGCGAGGGCGGCTGCT < 41bp 0.523723447674012 0.744937179630972 0.19585088 0.117029876 prediction 0.44242746391392 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102110269 chr7:102110270 synonymous SNV . 0 22 hm5C_associated_SNPs_119101 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:102110264-102110296
64251 chr1 6269493 6269493 1 + C G rs199646373 6269489 + 6269469 6269509 41 CCCAGGCCGTGAAGGCCCTGCAGACGGCCACGCGGGAGGCC CCCAGGCCGTGAAGGCCCTGCAGAGGGCCACGCGGGAGGCC < 41bp 0.422117955437759 0.721212689446854 0.6853597 0.7655983 prediction 0.442425378893707 Functional Gain - RNF207 ENSG00000158286 CDS Human protein_coding chr1:6269489 chr1:6269493 nonsynonymous SNV 0.931 1 25 hm5C_associated_SNPs_119102 0 0 4 BUD13 POSTAR2 ENCODE chr1:6269488-6269544
64251 chr12 132636858 132636858 1 + C T rs117703883 132636857 + 132636837 132636877 41 GGGACCTGAAGAAGAAGGGGCCCGAGCCGGTGCCACTGGAG GGGACCTGAAGAAGAAGGGGCTCGAGCCGGTGCCACTGGAG < 41bp 0.54690741886464 0.768119570787624 0.4830761 0.43748626 prediction 0.442424303845969 Functional Gain - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132636857 chr12:132636858 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_119103 0 0 1 EFTUD2 POSTAR2 ENCODE chr12:132636828-132636868
64251 chr11 111953686 111953686 1 + A G LGG 111953683 + 111953663 111953703 41 TGAAAGGTCTGCTGAGAGCTCAGAGGATGACTAAATGGGAA TGAAAGGTCTGCTGAGAGCTCAGGGGATGACTAAATGGGAA < 41bp 0.498493474122845 0.7212006800187 0.8784128 0.9106389 prediction 0.4424013600374 Functional Gain - C11orf57 ENSG00000150776 CDS Human protein_coding chr11:111953683 chr11:111953686 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_119110 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:111953606-111953695
64251 chr19 35758116 35758116 1 + C G BRCA 35758112 + 35758092 35758132 41 GATGAGGAGTGGGGTGGCCACTCCCCCCGGAGTCCCAGGGG GATGAGGAGTGGGGTGGCCACTCCGCCCGGAGTCCCAGGGG < 41bp 0.640396425025272 0.861596275673683 0.3367418 0.7567681 prediction 0.442399701296821 Functional Gain - LSR ENSG00000105699 CDS Human protein_coding chr19:35758112 chr19:35758116 nonsynonymous SNV 0.831 0 25 hm5C_associated_SNPs_119111 0 0 4 DKC1 POSTAR2 ENCODE chr19:35758106-35758151
64251 chr7 64166764 64166764 1 + A G HNSC 64166761 + 64166741 64166781 41 AGAACATAAAAGATTCTTTCCAGAAAGTGACACTGAGAAGA AGAACATAAAAGATTCTTTCCAGGAAGTGACACTGAGAAGA < 41bp 0.526669143559038 0.747867377743052 0.10845634 0.29148638 prediction 0.442396468368027 Functional Gain - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64166761 chr7:64166764 nonsynonymous SNV 0.011 0 24 hm5C_associated_SNPs_119113 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:64166740-64166825
64251 chr12 51189733 51189733 1 + C T UCEC 51189732 + 51189712 51189752 41 TGAGGAGTCCCAGGACTCATCCGACAGCATAGGCTCCTCAC TGAGGAGTCCCAGGACTCATCTGACAGCATAGGCTCCTCAC < 41bp 0.481923852950419 0.721197147516735 0.4280045 0.33971402 prediction 0.442394295033471 Functional Gain - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51189732 chr12:51189733 synonymous SNV . 0 22 hm5C_associated_SNPs_119114 0 0 4 BUD13 POSTAR2 ENCODE chr12:51189670-51189759
64251 chr19 14562766 14562766 1 + C T SKCM 14562765 + 14562745 14562785 41 CCCTTCCTGAGCCGCCCAGCCCGGGGCCTTTACAGCCGAAG CCCTTCCTGAGCCGCCCAGCCTGGGGCCTTTACAGCCGAAG < 41bp 0.556139007635786 0.777334083481042 0.8861127 0.67869604 prediction 0.442390151690512 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14562765 chr19:14562766 nonsynonymous SNV 0.952 3 22 hm5C_associated_SNPs_119116 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14562763-14562785
64251 chr19 44610665 44610665 1 - A G rs2068061 44610667 - 44610647 44610687 41 GAGAACTGAGAGCTATTTATCATCAAGTCTTGAGACCTGGT GAGAACTGAGAGCTATTTATCACCAAGTCTTGAGACCTGGT < 41bp 0.463867010366184 0.721189940495993 0.19795212 0.13574532 prediction 0.442379880991985 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44610667 chr19:44610665 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_119119 0 1 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:44610655-44610675
64251 chr1 32678154 32678154 1 + T C HNSC 32678151 + 32678131 32678171 41 GAGCTGGTAACTGGCCATTACTATGTGGCTGTCGGAGAGGA GAGCTGGTAACTGGCCATTACTACGTGGCTGTCGGAGAGGA < 41bp 0.501078116141027 0.722268002666252 0.08942807 0.13941416 prediction 0.442379773050448 Functional Gain - DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32678151 chr1:32678154 synonymous SNV . 0 24 hm5C_associated_SNPs_119120 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:32678130-32678167
64251 chr19 7677440 7677440 1 + C G rs141087775 7677436 + 7677416 7677456 41 CAAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTGCCCC CAAGGCAGTGACCTTCTCGCCAGAGCTGGGCCCGGTGCCCC < 41bp 0.417154848699515 0.721186337796906 0.8088429 0.902928 prediction 0.442372675593812 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677436 chr19:7677440 nonsynonymous SNV 0.085 0 25 hm5C_associated_SNPs_119121 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:7677420-7677440
64251 chr14 74371780 74371780 1 + C T ESCA 74371779 + 74371759 74371799 41 CTGAAGAACCACCGGCGCATCCACACAGGTGTGTGCAGCAC CTGAAGAACCACCGGCGCATCTACACAGGTGTGTGCAGCAC < 41bp 0.597396076181168 0.818562453127428 0.25773865 0.919782 prediction 0.442332753892519 Functional Gain - ZNF410 ENSG00000119725 CDS Human protein_coding chr14:74371779 chr14:74371780 nonsynonymous SNV 0.388 4 22 hm5C_associated_SNPs_119126 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr14:74371741-74371786
64251 chr5 176794791 176794791 1 + C T KIRC 176794790 + 176794770 176794810 41 AGCTGCCACCCGTTGAGGGTCCTGGGGGCCGCCCTCTCCGC AGCTGCCACCCGTTGAGGGTCTTGGGGGCCGCCCTCTCCGC < 41bp 0.559269005173805 0.780421302989011 0.86607975 0.8455215 prediction 0.442304595630413 Functional Gain - RGS14 ENSG00000169220 CDS Human protein_coding chr5:176794790 chr5:176794791 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_119135 0 0 3 EFTUD2 POSTAR2 ENCODE chr5:176794788-176794861
64251 chr19 39871332 39871332 1 + C T GBM 39871331 + 39871311 39871351 41 GCCTCCCCGGGCCCTCCCACCCGGCCGGATGGGCCTCCTGA GCCTCCCCGGGCCCTCCCACCTGGCCGGATGGGCCTCCTGA < 41bp 0.567456775060438 0.788600989497253 0.30231118 0.28619683 prediction 0.442288428873629 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39871331 chr19:39871332 synonymous SNV . 0 22 hm5C_associated_SNPs_119138 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39871302-39871333
64251 chr19 50909475 50909475 1 + C A COAD 50909471 + 50909451 50909491 41 CCTTTCCTGGGCCGTGTGGCCGGCCTTTGCTCCAACATCCG CCTTTCCTGGGCCGTGTGGCCGGCATTTGCTCCAACATCCG < 41bp 0.302446120548118 0.721143457692402 0.09778157 0.13357455 prediction 0.442286915384805 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50909471 chr19:50909475 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_119139 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50909444-50909476
64251 chr6 18215282 18215282 1 + C A rs144521010 18215278 + 18215258 18215298 41 GTCTGTGATTGCCGGGGAGGCTGTCGCATCCGTGAGGACCC GTCTGTGATTGCCGGGGAGGCTGTAGCATCCGTGAGGACCC < 41bp 0.300030536118823 0.72114047236467 0.31880534 0.29573572 prediction 0.44228094472934 Functional Gain - KDM1B ENSG00000165097 CDS Human protein_coding chr6:18215278 chr6:18215282 synonymous SNV . 0 25 hm5C_associated_SNPs_119140 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:18215255-18215304
64251 chr15 22999429 22999429 1 + C A UCEC 22999428 + 22999408 22999448 41 GAGGTCATCCTGACACGGATCCGGAGCTTTCTGGATGACCC GAGGTCATCCTGACACGGATCAGGAGCTTTCTGGATGACCC < 41bp 0.590956694768928 0.812091149566087 0.7220746 0.80306566 prediction 0.442268909594318 Functional Gain - CYFIP1 ENSG00000068793 CDS Human other chr15:22999428 chr15:22999429 synonymous SNV . 0 22 hm5C_associated_SNPs_119144 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr15:22999420-22999461
64251 chr16 4432570 4432570 1 + C T rs371492735 4432569 + 4432549 4432589 41 AGCCGTCCACTCCAACCACGCCCCAGTCACCCAGGCCCGCG AGCCGTCCACTCCAACCACGCTCCAGTCACCCAGGCCCGCG < 41bp 0.564912814693768 0.786044801940708 0.027265698 0.33864206 prediction 0.442263974493881 Functional Gain - VASN ENSG00000168140 CDS Human protein_coding chr16:4432569 chr16:4432570 synonymous SNV . 0 22 hm5C_associated_SNPs_119147 0 0 1 SND1 POSTAR2 ENCODE chr16:4432565-4432606
64251 chr1 29618465 29618465 1 + A G LUSC 29618462 + 29618442 29618482 41 AGCGCCGTGGACCGCAGCTTCACAGACCAGAGCACCCTGCA AGCGCCGTGGACCGCAGCTTCACGGACCAGAGCACCCTGCA < 41bp 0.478167408270537 0.721129297352854 0.1430301 0.62018144 prediction 0.442258594705708 Functional Gain - PTPRU ENSG00000060656 CDS Human protein_coding chr1:29618462 chr1:29618465 synonymous SNV . 0 24 hm5C_associated_SNPs_119150 0 0 1 PPIG POSTAR2 ENCODE chr1:29618441-29618531
64251 chr6 170870941 170870941 1 + C A LAML 170870940 + 170870920 170870960 41 GCCTTATGGCACTGGACTGACCCCACAGCCTATTCAGAACA GCCTTATGGCACTGGACTGACACCACAGCCTATTCAGAACA < 41bp 0.583148137831982 0.804257305801684 0.048439562 0.02618128 prediction 0.442218335939404 Functional Gain - TBP ENSG00000112592 CDS Human protein_coding chr6:170870940 chr6:170870941 synonymous SNV . 0 22 hm5C_associated_SNPs_119158 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:170870917-170870941
64251 chr15 90814559 90814559 1 + A G rs143871202 90814556 + 90814536 90814576 41 AGCAGAAGCTGAAGCAGGATCAAAAAGTCCTTAAGAAAGCT AGCAGAAGCTGAAGCAGGATCAAGAAGTCCTTAAGAAAGCT < 41bp 0.562329666074379 0.783416105732606 0.09902665 0.51535743 prediction 0.442172879316453 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814556 chr15:90814559 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_119168 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:90814500-90814560
64251 chr19 39871317 39871317 1 + C G rs369647211 39871313 + 39871293 39871333 41 CCAGCGGCAGTTCCCAATGCCTCCCCGGGCCCTCCCACCCG CCAGCGGCAGTTCCCAATGCCTCCGCGGGCCCTCCCACCCG < 41bp 0.624745079418846 0.845827168338219 0.25193393 0.7478728 prediction 0.442164177838746 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39871313 chr19:39871317 synonymous SNV . 0 25 hm5C_associated_SNPs_119172 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39871302-39871333
64251 chr8 42958731 42958731 1 + C T SKCM 42958730 + 42958710 42958750 41 AACAGCAGGAGAGGCCTCGCCCCCCGAGAGGTGCCGCCAGC AACAGCAGGAGAGGCCTCGCCTCCCGAGAGGTGCCGCCAGC < 41bp 0.46412054752354 0.721077566737091 0.09049258 0.35254788 prediction 0.442155133474182 Functional Gain - POMK ENSG00000185900 CDS Human protein_coding chr8:42958730 chr8:42958731 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_119173 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr8:42958720-42958740
64251 chr14 23081119 23081119 1 + C A rs578149833 23081118 + 23081098 23081138 41 GGGCAGTAGGCTGGGCCTGGCCTCAGAACCTGGTGGCTCCT GGGCAGTAGGCTGGGCCTGGCATCAGAACCTGGTGGCTCCT < 41bp 0.487670487109265 0.721074937107036 0.3628226 0.63300574 prediction 0.442149874214072 Functional Gain - ABHD4 ENSG00000100439 UTR3 Human protein_coding chr14:23081118 chr14:23081119 . . 0 22 hm5C_associated_SNPs_119175 0 0 3 FAM120A POSTAR2 ENCODE chr14:23081073-23081135
64251 chr6 41899507 41899507 1 + C T LUSC 41899506 + 41899486 41899526 41 GAGTCTGGCACTTGTACCCTCCGGGAAGCCATCATTGTGGG GAGTCTGGCACTTGTACCCTCTGGGAAGCCATCATTGTGGG < 41bp 0.577577027263769 0.798651249587949 0.33440417 0.2779742 prediction 0.44214844464836 Functional Gain - BYSL ENSG00000112578 CDS Human protein_coding chr6:41899506 chr6:41899507 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_119176 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:41899490-41899517
64251 chr7 44806178 44806178 1 + T A LUSC 44806174 + 44806154 44806194 41 CCAAGCGAGCTTAGGACCTACGGGTGAACTGGCCTTCAGTC CCAAGCGAGCTTAGGACCTACGGGAGAACTGGCCTTCAGTC < 41bp 0.659517287540778 0.880568014269202 0.89324266 0.9083776 prediction 0.442101453456848 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44806174 chr7:44806178 synonymous SNV . 0 25 hm5C_associated_SNPs_119185 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585675 chr7:44806158-44806191
64251 chr12 110390965 110390965 1 - A T UCEC 110390969 - 110390949 110390989 41 AGTCAAGACAACGATCAGCCCGACTATGACAGCGTGGCATC AGTCAAGACAACGATCAGCCCGACAATGACAGCGTGGCATC < 41bp 0.385655096754374 0.721047898248304 0.061361462 0.074223965 prediction 0.442095796496607 Functional Gain - GIT2 ENSG00000139436 CDS Human protein_coding chr12:110390969 chr12:110390965 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_119188 0 0 4 MTPAP POSTAR2 ENCODE chr12:110390907-110391045
64251 chr17 16285278 16285278 1 + C T rs151174232 16285277 + 16285257 16285297 41 CATCACCCTTGAGGTGGAGCCCAGTGACACCATCGAAAATG CATCACCCTTGAGGTGGAGCCTAGTGACACCATCGAAAATG < 41bp 0.488249332041357 0.721041619289994 0.25521356 0.21207103 prediction 0.442083238579987 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285277 chr17:16285278 synonymous SNV . 0 22 hm5C_associated_SNPs_119189 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:16285200-16285280
64251 chr1 171526768 171526768 1 + C G rs370245695 171526767 + 171526747 171526787 41 TTCTTCAGCTCCAGCCTCAGCCCCAGCTCCAACCCCCATCC TTCTTCAGCTCCAGCCTCAGCGCCAGCTCCAACCCCCATCC < 41bp 0.415592254213174 0.721035792798648 0.070281625 0.30216485 prediction 0.442071585597296 Functional Gain - PRRC2C ENSG00000117523 CDS Human protein_coding chr1:171526767 chr1:171526768 synonymous SNV . 0 22 hm5C_associated_SNPs_119191 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:171526737-171526772
64251 chr12 31236915 31236915 1 + C A GBM 31236911 + 31236891 31236931 41 TCCTGCGAAGGGGCTGCAGGCACCCCGAGGCCTGCTGGAGA TCCTGCGAAGGGGCTGCAGGCACCACGAGGCCTGCTGGAGA < 41bp 0.321129813389483 0.721035069754373 0.1993567 0.31538087 prediction 0.442070139508746 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31236911 chr12:31236915 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_119193 0 0 4 GRWD1 POSTAR2 ENCODE chr12:31236877-31236930
64251 chr14 67768720 67768720 1 + A G rs142805397 67768717 + 67768697 67768737 41 ACTGGCCCACGATAAGGTTGCTGAGCAGGAAATGCAGCTAG ACTGGCCCACGATAAGGTTGCTGGGCAGGAAATGCAGCTAG < 41bp 0.546714450876883 0.767749198611231 0.4267789 0.72517467 prediction 0.442069495468695 Functional Gain - MPP5 ENSG00000072415 CDS Human protein_coding chr14:67768717 chr14:67768720 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_119194 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:67768696-67768726
64251 chr17 4846537 4846537 1 + A G THYM 4846534 + 4846514 4846554 41 GGCTATTACCTCATCCCTTTCACAGGGATTGTGGGACTGCT GGCTATTACCTCATCCCTTTCACGGGGATTGTGGGACTGCT < 41bp 0.562022052518522 0.783054089424017 0.052453905 0.26445317 prediction 0.44206407381099 Functional Gain - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4846534 chr17:4846537 synonymous SNV . 0 24 hm5C_associated_SNPs_119195 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:4846500-4846571
64251 chr22 50957725 50957725 1 + C T SKCM 50957724 + 50957704 50957744 41 CCCCAAGGCCGCTCTGGAGCCCAAGGAGTCCAGGAGCCCGC CCCCAAGGCCGCTCTGGAGCCTAAGGAGTCCAGGAGCCCGC < 41bp 0.562900252611987 0.783930505700009 0.21282375 0.1795052 prediction 0.442060506176045 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957724 chr22:50957725 synonymous SNV . 0 22 hm5C_associated_SNPs_119196 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:50957686-50957743
64251 chr1 246810637 246810637 1 + C T SKCM 246810636 + 246810616 246810656 41 AGCGCTCCACACCCAGTCCTCCGAGACAGCAGGGAGCCCGT AGCGCTCCACACCCAGTCCTCTGAGACAGCAGGGAGCCCGT < 41bp 0.563555478544619 0.784576668535472 0.61669374 0.40686166 prediction 0.442042379981707 Functional Gain - CNST ENSG00000162852 CDS Human protein_coding chr1:246810636 chr1:246810637 synonymous SNV . 0 22 hm5C_associated_SNPs_119198 0 0 2 FMR1 POSTAR2 ENCODE chr1:246810631-246810676
64251 chr16 67168085 67168085 1 + T C KIRP 67168083 + 67168063 67168103 41 GTTTGCAGCCCAATTTTGCCCATGGCCTGGCTTCTCTCCAG GTTTGCAGCCCAATTTTGCCCACGGCCTGGCTTCTCTCCAG < 41bp 0.439117710617549 0.721019093900048 0.34815437 0.20536011 prediction 0.442038187800097 Functional Gain - C16orf70 ENSG00000125149 CDS Human protein_coding chr16:67168083 chr16:67168085 synonymous SNV . 0 23 hm5C_associated_SNPs_119201 0 0 9 EIF3D POSTAR2 GSE65004,GSM1585671 chr16:67168070-67168090
64251 chr10 95660719 95660719 1 + C A LUSC 95660718 + 95660698 95660738 41 CCCTTGGGATGCTCTTTTCACCGTGTTCACAATCACTGGAG CCCTTGGGATGCTCTTTTCACAGTGTTCACAATCACTGGAG < 41bp 0.465840866942132 0.721019088996384 0.26509154 0.40821576 prediction 0.442038177992767 Functional Gain - SLC35G1 ENSG00000176273 CDS Human protein_coding chr10:95660718 chr10:95660719 synonymous SNV . 0 22 hm5C_associated_SNPs_119202 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:95660687-95660720
64251 chr5 14713753 14713753 1 + C T STAD 14713752 + 14713732 14713772 41 TCTTCAGTGTCATCAGCCACCCGGTGAGATGCGCCCTCACT TCTTCAGTGTCATCAGCCACCTGGTGAGATGCGCCCTCACT < 41bp 0.525289242445205 0.746305675702624 0.45131975 0.2651683 prediction 0.442032866514839 Functional Gain - ANKH ENSG00000154122 CDS Human protein_coding chr5:14713752 chr5:14713753 nonsynonymous SNV 0.984 3 22 hm5C_associated_SNPs_119203 2 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:14713747-14713846
64251 chr9 95599327 95599327 1 + C G CESC 95599323 + 95599303 95599343 41 GGCCTCCAGCTGGGCCATGTCAGTCTCATCGTCCCAAGGCT GGCCTCCAGCTGGGCCATGTCAGTGTCATCGTCCCAAGGCT < 41bp 0.415248294627308 0.721016389851499 0.17367864 0.30085152 prediction 0.442032779702998 Functional Gain - ANKRD19P ENSG00000187984;ENSG00000226721 ncRNA_exonic Human other chr9:95599323 chr9:95599327 . . 0 25 hm5C_associated_SNPs_119204 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:95599321-95599345
64251 chr20 18465004 18465004 1 + C A rs1133724 18465003 + 18464983 18465023 41 GACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAAT GACTGAATGTTTGTGTGCCCCAAGAATTCTAATGTTGAAAT < 41bp 0.54935366389205 0.770367981993644 0.14036447 0.1330513 prediction 0.44202863620319 Functional Gain - POLR3F ENSG00000132664 UTR3 Human protein_coding chr20:18465003 chr20:18465004 . . 0 22 hm5C_associated_SNPs_119205 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr20:18464925-18465007
64251 chr17 73819525 73819525 1 + C T rs8078208 73819524 + 73819504 73819544 41 CCAGGCCCTGCCCGCCTTCTCCGACCTGGAGGCGCTCTCAC CCAGGCCCTGCCCGCCTTCTCTGACCTGGAGGCGCTCTCAC < 41bp 0.473499634253718 0.721008486588641 0.45694444 0.14003575 prediction 0.442016973177281 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73819524 chr17:73819525 synonymous SNV . 0 22 hm5C_associated_SNPs_119207 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73819520-73819540
64251 chr7 77326035 77326035 1 + C G BLCA 77326034 + 77326014 77326054 41 GCCTCAGAGCTATGGCAGCCCCGCGTCTTGGAGCTTTGCCC GCCTCAGAGCTATGGCAGCCCGGCGTCTTGGAGCTTTGCCC < 41bp 0.654957988714076 0.875961674480452 0.19048578 0.704441 prediction 0.442007371532752 Functional Gain - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77326034 chr7:77326035 synonymous SNV . 0 22 hm5C_associated_SNPs_119208 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr7:77326018-77326038
64251 chr11 34979119 34979119 1 + C T rs76486106 34979118 + 34979098 34979138 41 TGTCAAGAAGGAACACATACCCGGGACACTACGGTGAGTAT TGTCAAGAAGGAACACATACCTGGGACACTACGGTGAGTAT < 41bp 0.489610600752778 0.72099860203065 0.8880584 0.66712314 prediction 0.4419972040613 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34979118 chr11:34979119 synonymous SNV . 0 22 hm5C_associated_SNPs_119211 2 0 2 GRWD1 POSTAR2 ENCODE chr11:34979025-34979135
64251 chr2 176987785 176987785 1 + C A LUAD 176987784 + 176987764 176987804 41 GCGGCGATGAGCGGCCTCTACCACCCGTACGTTCCCCCGCC GCGGCGATGAGCGGCCTCTACAACCCGTACGTTCCCCCGCC < 41bp 0.541650997480926 0.762646546467924 0.3684697 0.2709564 prediction 0.441991097973995 Functional Gain - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176987784 chr2:176987785 nonsynonymous SNV 0.746 3 22 hm5C_associated_SNPs_119214 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr2:176987780-176987800
64251 chr14 74961623 74961623 1 + C A UCEC 74961622 + 74961602 74961642 41 GACTTCAGCCAAGAACTGATCCGAAGCTCATTTCAAGTGTT GACTTCAGCCAAGAACTGATCAGAAGCTCATTTCAAGTGTT < 41bp 0.575790032851071 0.7967844533653 0.35651106 0.8334373 prediction 0.441988841028459 Functional Gain - ISCA2 ENSG00000165898 CDS Human protein_coding chr14:74961622 chr14:74961623 synonymous SNV . 0 22 hm5C_associated_SNPs_119215 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:74961613-74961651
64251 chr15 76634133 76634133 1 + C T UCEC 76634132 + 76634112 76634152 41 CCTCCCTGTCCTCGCAGCTCCCGGACACCCCCAACAGTATG CCTCCCTGTCCTCGCAGCTCCTGGACACCCCCAACAGTATG < 41bp 0.557061833641218 0.778051490752346 0.2275162 0.06378162 prediction 0.441979314222256 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76634132 chr15:76634133 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_119217 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:76634115-76634140
64251 chr3 9515081 9515081 1 + A G UCEC 9515078 + 9515058 9515098 41 GCCCATGGTGTGCAGGGATCCTCAGCCCGAACTCCATCTTC GCCCATGGTGTGCAGGGATCCTCGGCCCGAACTCCATCTTC < 41bp 0.558263117367118 0.779251561182598 0.14194459 0.20238021 prediction 0.441976887630961 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9515078 chr3:9515081 synonymous SNV . 0 24 hm5C_associated_SNPs_119219 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:9515067-9515143
64251 chr3 133539984 133539984 1 + A G rs184714350 133539981 + 133539961 133540001 41 ATGGCCTCTGCCTGCTGTCTCACATGTCCCTTCTGGTGGTC ATGGCCTCTGCCTGCTGTCTCACGTGTCCCTTCTGGTGGTC < 41bp 0.530425355978355 0.751404961324781 0.3668731 0.5011101 prediction 0.441959210692852 Functional Gain - SRPRB ENSG00000144867 UTR3 Human protein_coding chr3:133539981 chr3:133539984 . . 0 24 hm5C_associated_SNPs_119222 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:133539961-133540011
64251 chr4 154557616 154557616 1 + C T rs34343821 154557615 + 154557595 154557635 41 TCGTGTGCAAGGAATACTACCCGGGGTTCAACCCGTTTCGC TCGTGTGCAAGGAATACTACCTGGGGTTCAACCCGTTTCGC < 41bp 0.550301660440709 0.771277420877758 0.9384117 0.8408604 prediction 0.441951520874099 Functional Gain - TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154557615 chr4:154557616 nonsynonymous SNV 0.370 0 22 hm5C_associated_SNPs_119225 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:154557613-154557651
64251 chr16 10575768 10575768 1 + C T UCEC 10575767 + 10575747 10575787 41 CCTGAATTAGTAGACAAAACCCGAGACACACTTCCTCCCCA CCTGAATTAGTAGACAAAACCTGAGACACACTTCCTCCCCA < 41bp 0.540293245005551 0.761267024091626 0.40338415 0.2675904 prediction 0.44194755817215 Functional Gain - ATF7IP2 ENSG00000166669 CDS Human protein_coding chr16:10575767 chr16:10575768 stopgain 0.959 0 22 hm5C_associated_SNPs_119226 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr16:10575746-10575770
64251 chr22 50962320 50962320 1 - A G rs370229835 50962322 - 50962302 50962342 41 GTGGACCCCGAGCGGGACGACGTTGAAGCCATGGCCCGCTA GTGGACCCCGAGCGGGACGACGCTGAAGCCATGGCCCGCTA < 41bp 0.580768351258333 0.801738476734763 0.06540811 0.14663112 prediction 0.441940250952859 Functional Gain - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962322 chr22:50962320 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_119228 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50962180-50962360
64251 chr15 39880779 39880779 1 + T C LIHC 39880776 + 39880756 39880796 41 TGGGACATCTGTTCTGTCACCTGTGGAGGAGGGGTACAGAA TGGGACATCTGTTCTGTCACCTGCGGAGGAGGGGTACAGAA < 41bp 0.489740720790313 0.720967646480359 0.34980643 0.83359516 prediction 0.441935292960719 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39880776 chr15:39880779 synonymous SNV . 0 24 hm5C_associated_SNPs_119229 0 0 6 DGCR8 POSTAR2 ENCODE chr15:39880742-39880787
64251 chr12 50513923 50513923 1 + C T UCEC 50513922 + 50513902 50513942 41 GGGGGGTACCTCTGCAGTGTCCGAGTCTACCACTATTTCCA GGGGGGTACCTCTGCAGTGTCTGAGTCTACCACTATTTCCA < 41bp 0.542424334822039 0.763390144394781 0.44510785 0.5053648 prediction 0.441931619145485 Functional Gain - COX14 ENSG00000178449 CDS Human protein_coding chr12:50513922 chr12:50513923 stopgain 0.929 0 22 hm5C_associated_SNPs_119230 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr12:50513888-50513932
64251 chrX 65412091 65412091 1 + C T SKCM 65412090 + 65412070 65412110 41 GAGATTCAATGGGACTATGGCCCGATGGGGCATGATGGGAG GAGATTCAATGGGACTATGGCTCGATGGGGCATGATGGGAG < 41bp 0.610633192865593 0.831594825903143 0.15212524 0.17147201 prediction 0.441923266075101 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65412090 chrX:65412091 nonsynonymous SNV 0.877 5 22 hm5C_associated_SNPs_119231 0 0 3 LIN28B POSTAR2 ENCODE chrX:65412062-65412132
64251 chr5 137681256 137681256 1 + C T SKCM 137681255 + 137681235 137681275 41 GCGGCGCCACGAGGAAGACCCCCGGCGTCTGCGGCCTTCGT GCGGCGCCACGAGGAAGACCCTCGGCGTCTGCGGCCTTCGT < 41bp 0.466006109002759 0.720961366092513 0.8638427 0.5108645 prediction 0.441922732185026 Functional Gain - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137681255 chr5:137681256 nonsynonymous SNV 0.961 1 22 hm5C_associated_SNPs_119232 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:137681240-137681260
64251 chr19 46185005 46185005 1 + C G HNSC 46185001 + 46184981 46185021 41 TCACAGGTGCAGTCGGAGATCCGCCGTGGCTGGCACCACTG TCACAGGTGCAGTCGGAGATCCGCGGTGGCTGGCACCACTG < 41bp 0.641182046869553 0.86214318013394 0.5028521 0.90195084 prediction 0.441922266528774 Functional Gain - GIPR ENSG00000010310 CDS Human protein_coding chr19:46185001 chr19:46185005 nonsynonymous SNV 0.929 1 25 hm5C_associated_SNPs_119233 0 0 1 NONO POSTAR2 ENCODE chr19:46184921-46185028
64251 chr11 82639926 82639926 1 + T C UCEC 82639923 + 82639903 82639943 41 AAACAAATTGTTTGTTATTACTGTATTTGGAAGTTGCTTAG AAACAAATTGTTTGTTATTACTGCATTTGGAAGTTGCTTAG < 41bp 0.499107616334928 0.720955897693182 0.19999763 0.21651769 prediction 0.441911795386364 Functional Gain - DDIAS ENSG00000165490 CDS Human protein_coding chr11:82639923 chr11:82639926 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_119235 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:82639910-82639936
64251 chr16 135670 135670 1 + T C GBM 135668 + 135648 135688 41 GTGGCAGCAGCCCGGGTGGGCGTCGGCCATGCAGGGGAGTG GTGGCAGCAGCCCGGGTGGGCGCCGGCCATGCAGGGGAGTG < 41bp 0.55629106022669 0.777246168222706 0.827358 0.83295286 prediction 0.441910215992033 Functional Gain - MPG ENSG00000103152 CDS Human protein_coding chr16:135668 chr16:135670 nonsynonymous SNV 0.130 2 23 hm5C_associated_SNPs_119236 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:135646-135694
64251 chr11 126146105 126146105 1 + C T COAD 126146104 + 126146084 126146124 41 GCACCAAGCTACCTGTGGAGCCGAGGAAAAGGTAACTGCCC GCACCAAGCTACCTGTGGAGCTGAGGAAAAGGTAACTGCCC < 41bp 0.54981553867863 0.770766485311851 0.48028058 0.22982788 prediction 0.441901893266442 Functional Gain - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126146104 chr11:126146105 nonsynonymous SNV 0.954 2 22 hm5C_associated_SNPs_119240 0 0 11 EFTUD2 POSTAR2 ENCODE chr11:126146103-126146141
64251 chr7 100320301 100320301 1 + C G rs140683829 100320300 + 100320280 100320320 41 CCTGTAGGTCGGGCAGCAGGCCGTAGAAGTCTGGCAGGGCC CCTGTAGGTCGGGCAGCAGGCGGTAGAAGTCTGGCAGGGCC < 41bp 0.670170512323247 0.891113114241187 0.33988988 0.7773622 prediction 0.44188520383588 Functional Gain - EPO ENSG00000130427 CDS Human protein_coding chr7:100320300 chr7:100320301 synonymous SNV . 0 22 hm5C_associated_SNPs_119243 0 0 2 BUD13 POSTAR2 ENCODE chr7:100320256-100320306
64251 chr19 17433715 17433715 1 + C G rs117703583 17433714 + 17433694 17433734 41 GGGCCACGTCTTGCAAACCACCGCGCTGTCCTCTTTGAGAA GGGCCACGTCTTGCAAACCACGGCGCTGTCCTCTTTGAGAA < 41bp 0.467148981142929 0.720941388365867 0.42628872 0.8544351 prediction 0.441882776731733 Functional Gain - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17433714 chr19:17433715 . . 0 22 hm5C_associated_SNPs_119244 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:17433706-17433730
64251 chr11 57428888 57428888 1 + C T ESCA 57428887 + 57428867 57428907 41 TTCCTTCTCATCATGGATATCCGGTTCATGGATCTGAAGTA TTCCTTCTCATCATGGATATCTGGTTCATGGATCTGAAGTA < 41bp 0.48099226225692 0.720938271848358 0.058407843 0.022113979 prediction 0.441876543696717 Functional Gain - CLP1 ENSG00000172409 CDS Human protein_coding chr11:57428887 chr11:57428888 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119248 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:57428863-57428895
64251 chr8 144463885 144463885 1 + C T COAD 144463884 + 144463864 144463904 41 CGTCATTCCAGGGAGCCAGGCCGCGGTAAGGGCCCCGCCGG CGTCATTCCAGGGAGCCAGGCTGCGGTAAGGGCCCCGCCGG < 41bp 0.552061698895472 0.772999715457371 0.84564686 0.56503993 prediction 0.441876033123798 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144463884 chr8:144463885 synonymous SNV . 0 22 hm5C_associated_SNPs_119249 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:144463859-144463886
64251 chr15 89743540 89743540 1 + T A rs558765292 89743536 + 89743516 89743556 41 CAGAGGCGCTCCTCACTTCCCAGATGGGGCGGCGGGCAGCA CAGAGGCGCTCCTCACTTCCCAGAAGGGGCGGCGGGCAGCA < 41bp 0.609008341669868 0.829941399748407 0.71109843 0.5586644 prediction 0.441866116157079 Functional Gain - ABHD2 ENSG00000140526 UTR3 Human protein_coding chr15:89743536 chr15:89743540 . . 0 25 hm5C_associated_SNPs_119250 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chr15:89743520-89743540
64251 chr1 53678987 53678987 1 + A G UCEC 53678984 + 53678964 53679004 41 TCTGCGGCATCTGGCAGCAGCCAAAGGGATCATCTTGCCTG TCTGCGGCATCTGGCAGCAGCCAGAGGGATCATCTTGCCTG < 41bp 0.559111322549016 0.780041205974684 0.419464 0.80719125 prediction 0.441859766851337 Functional Gain - CPT2 ENSG00000157184 CDS Human protein_coding chr1:53678984 chr1:53678987 nonsynonymous SNV 0.026 1 24 hm5C_associated_SNPs_119251 0 0 1 FXR2 POSTAR2 ENCODE chr1:53678976-53679093
64251 chr11 120097534 120097534 1 + C T COAD 120097533 + 120097513 120097553 41 TCCCACACACAGAAAAATCCCCGGGCAGTGCGGCAGGCGGA TCCCACACACAGAAAAATCCCTGGGCAGTGCGGCAGGCGGA < 41bp 0.547766940261275 0.768695648477486 0.37953603 0.29610312 prediction 0.441857416432422 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120097533 chr11:120097534 nonsynonymous SNV 0.442 4 22 hm5C_associated_SNPs_119253 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:120097527-120097574
64251 chr2 220403108 220403108 1 + C G rs549591757 220403107 + 220403087 220403127 41 TTGTAAATATTTAGGGAAAGCCGGGTGGGGGGAGGGGATAC TTGTAAATATTTAGGGAAAGCGGGGTGGGGGGAGGGGATAC < 41bp 0.643768044101003 0.864694713693771 0.5707115 0.86433154 prediction 0.441853339185534 Functional Gain - ASIC4 ENSG00000072182 UTR3 Human protein_coding chr2:220403107 chr2:220403108 . . 0 22 hm5C_associated_SNPs_119254 0 0 2 PUM2 POSTAR2 ENCODE chr2:220403087-220403139
64251 chr9 101606450 101606450 1 + C A ACC 101606449 + 101606429 101606469 41 GAAAACCAGATTGTGGGACACCAGGTCATTCTGTACCTCTG GAAAACCAGATTGTGGGACACAAGGTCATTCTGTACCTCTG < 41bp 0.462744476684426 0.720919001524521 0.7872708 0.7628038 prediction 0.441838003049041 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101606449 chr9:101606450 nonsynonymous SNV 0.863 1 22 hm5C_associated_SNPs_119255 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:101606443-101606471
64251 chr10 73082758 73082758 1 + C T SKCM 73082757 + 73082737 73082777 41 GAGTACTGGATGTTCAAACTCCGCAACTCCTCCAGCCCAGC GAGTACTGGATGTTCAAACTCTGCAACTCCTCCAGCCCAGC < 41bp 0.60456214056746 0.825480811014461 0.10158378 0.12840295 prediction 0.441837340894001 Functional Gain - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73082757 chr10:73082758 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_119256 0 0 1 GRWD1 POSTAR2 ENCODE chr10:73082688-73082793
64251 chr5 76349900 76349900 1 + T C rs6865460 76349897 + 76349877 76349917 41 GGCAGTGATACCTGTGATGGCTGTGAACCAGGGCAGGTTAG GGCAGTGATACCTGTGATGGCTGCGAACCAGGGCAGGTTAG < 41bp 0.511914913267905 0.732830979055549 0.13220638 0.16832626 prediction 0.441832131575288 Functional Gain - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76349897 chr5:76349900 synonymous SNV . 0 24 hm5C_associated_SNPs_119262 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr5:76349879-76349900
64251 chr5 130538279 130538279 1 + A G rs116473390 130538276 + 130538256 130538296 41 ATTCATAGGCACAGTCATAGCACACTGCAGCCTAGAATTTC ATTCATAGGCACAGTCATAGCACGCTGCAGCCTAGAATTTC < 41bp 0.497571550901147 0.720915473500714 0.096993476 0.1257694 prediction 0.441830947001428 Functional Gain - LYRM7 ENSG00000186687 UTR3 Human protein_coding chr5:130538276 chr5:130538279 . . 0 24 hm5C_associated_SNPs_119263 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:130538259-130538307
64251 chr7 128588699 128588699 1 + C T LUSC 128588698 + 128588678 128588718 41 TCTTGGTCAGCTGATAGTATCCGGCTACAGATCTCAAACCC TCTTGGTCAGCTGATAGTATCTGGCTACAGATCTCAAACCC < 41bp 0.52559167707601 0.746490872747199 0.38388473 0.11154887 prediction 0.441798391342378 Functional Gain - IRF5 ENSG00000128604 CDS Human protein_coding chr7:128588698 chr7:128588699 nonsynonymous SNV 0.986 4 22 hm5C_associated_SNPs_119271 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:128588683-128588707
64251 chr12 9085945 9085945 1 + C T COAD 9085944 + 9085924 9085964 41 ATATGCAGTCTGTGCACTTGCCGGTGAGTGATGTCTGATGG ATATGCAGTCTGTGCACTTGCTGGTGAGTGATGTCTGATGG < 41bp 0.478240783989248 0.720898904912842 0.46499372 0.26852745 prediction 0.441797809825685 Functional Gain - PHC1 ENSG00000111752 CDS Human protein_coding chr12:9085944 chr12:9085945 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_119273 0 0 3 PRPF8 POSTAR2 ENCODE chr12:9085906-9086021
64251 chr9 134073313 134073313 1 + A G UCEC 134073310 + 134073290 134073330 41 CATTGTCATTTGGTAGCCTCCTGAGTTCAGCAACTACCCCC CATTGTCATTTGGTAGCCTCCTGGGTTCAGCAACTACCCCC < 41bp 0.556743859823811 0.777638802273677 0.105442435 0.21454194 prediction 0.441789884899732 Functional Gain - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134073310 chr9:134073313 nonsynonymous SNV 0.250 1 24 hm5C_associated_SNPs_119277 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:134073288-134073320
64251 chr7 1132106 1132106 1 + C T COAD 1132105 + 1132085 1132125 41 CTGGTCAGGGCGCACCGGCACCGTGGGCTGCGGCCCCGGCG CTGGTCAGGGCGCACCGGCACTGTGGGCTGCGGCCCCGGCG < 41bp 0.495150852046915 0.720889400244987 0.50391614 0.27294338 prediction 0.441778800489974 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1132105 chr7:1132106 nonsynonymous SNV 0.223 3 22 hm5C_associated_SNPs_119278 0 0 1 EIF3H POSTAR2 ENCODE chr7:1132074-1132129
64251 chr6 13978618 13978618 1 + C A rs280163 13978614 + 13978594 13978634 41 CATTGAGATACTTGTTTCCTCTGCCCATTCTCCCTTGCCAA CATTGAGATACTTGTTTCCTCTGCACATTCTCCCTTGCCAA < 41bp 0.335226684891388 0.720888335292406 0.1784702 0.1275194 prediction 0.441776670584811 Functional Gain - RNF182 ENSG00000180537 UTR3 Human protein_coding chr6:13978614 chr6:13978618 . . 0 25 hm5C_associated_SNPs_119279 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:13978600-13978634
64251 chr16 23701255 23701255 1 + A G rs56298795 23701252 + 23701232 23701272 41 GACGAGAAGCGGGACTTCCGCACATACCGCCTGAGTCTCCT GACGAGAAGCGGGACTTCCGCACGTACCGCCTGAGTCTCCT < 41bp 0.544997688018199 0.76588358761206 0.017489702 0.07104948 prediction 0.441771799187722 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23701252 chr16:23701255 synonymous SNV . 0 24 hm5C_associated_SNPs_119280 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:23701211-23701255
64251 chr20 826169 826169 1 + C T STAD 826168 + 826148 826188 41 TGGCAGGGCCCAGTGCTGGGCCGGGCAGCTCTGAAGGGGGC TGGCAGGGCCCAGTGCTGGGCTGGGCAGCTCTGAAGGGGGC < 41bp 0.522234659616865 0.743117973038951 0.54002595 0.40210992 prediction 0.441766626844172 Functional Gain - FAM110A ENSG00000125898 CDS Human protein_coding chr20:826168 chr20:826169 nonsynonymous SNV 0.961 1 22 hm5C_associated_SNPs_119282 0 0 2 DROSHA POSTAR2 ENCODE chr20:826169-826210
64251 chr19 58991357 58991357 1 - G A UCS 58991358 - 58991338 58991378 41 AGGCTTCTGCAGACGCCTGTCCCCGTGAGCAGCATCCCCAG AGGCTTCTGCAGACGCCTGTCTCCGTGAGCAGCATCCCCAG < 41bp 0.494919486440734 0.720860497293731 0.17301545 0.27816933 prediction 0.441720994587463 Functional Gain - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58991358 chr19:58991357 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_119288 0 0 2 CSTF2T POSTAR2 ENCODE chr19:58991356-58991464
64251 chr3 170078952 170078952 1 + C A BLCA 170078951 + 170078931 170078971 41 AATGTCAGGGTTTATTTGCACCCCAGTTTTATGTTCAGCCT AATGTCAGGGTTTATTTGCACACCAGTTTTATGTTCAGCCT < 41bp 0.556437035159825 0.777294030602168 0.0943408 0.18781671 prediction 0.441713990884685 Functional Gain - SKIL ENSG00000136603 CDS Human protein_coding chr3:170078951 chr3:170078952 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_119290 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:170078909-170079002
64251 chr7 101006230 101006230 1 + T G rs4989269 101006227 + 101006207 101006247 41 CCTCTCGCTGTGCTCCCGGCCGGTGCCGCGGGTTCGGTCCG CCTCTCGCTGTGCTCCCGGCCGGGGCCGCGGGTTCGGTCCG < 41bp 0.665599897881418 0.886455179325621 0.6628472 0.93112075 prediction 0.441710562888406 Functional Gain - COL26A1 ENSG00000160963 UTR5 Human protein_coding chr7:101006227 chr7:101006230 . . 0 24 hm5C_associated_SNPs_119291 0 0 2 DDX3X POSTAR2 ENCODE chr7:101006202-101006286
64251 chr3 183354014 183354014 1 + C G rs116340275 183354013 + 183353993 183354033 41 CTGCTTTTTATTTCAGGAAGCCCGGGGGAGTGCGACCGCCT CTGCTTTTTATTTCAGGAAGCGCGGGGGAGTGCGACCGCCT < 41bp 0.439234179636714 0.720836299169425 0.9094336 0.90969384 prediction 0.441672598338851 Functional Gain - KLHL24 ENSG00000114796 UTR5 Human protein_coding chr3:183354013 chr3:183354014 . . 0 22 hm5C_associated_SNPs_119295 0 0 11 AKAP8L POSTAR2 ENCODE chr3:183354006-183354033
64251 chr7 140402692 140402692 1 + C T SKCM 140402691 + 140402671 140402711 41 GTGGTGGTGTGCACATTGAGCCCCGGTATAGACAGTTCCCC GTGGTGGTGTGCACATTGAGCTCCGGTATAGACAGTTCCCC < 41bp 0.572726131912261 0.79355499906481 0.05371824 0.08269337 prediction 0.441657734305098 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140402691 chr7:140402692 nonsynonymous SNV 0.984 3 22 hm5C_associated_SNPs_119297 0 0 24 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:140402660-140402700
64251 chr15 28900469 28900469 1 + C T UCEC 28900468 + 28900448 28900488 41 CCTTCCGTCATGGGACAAGACCGAAAGGGCGAGGGACATGA CCTTCCGTCATGGGACAAGACTGAAAGGGCGAGGGACATGA < 41bp 0.562474503929561 0.78330026057132 0.057982773 0.09900749 prediction 0.441651513283518 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28900468 chr15:28900469 . . 0 22 hm5C_associated_SNPs_119298 0 0 2 ZNF622 POSTAR2 ENCODE chr15:28900452-28900526
64251 chr6 43488150 43488150 1 + T C COAD 43488147 + 43488127 43488167 41 AAGAAATTGACCTGCTCATGCACTGTGTCAAGGGCATTGGT AAGAAATTGACCTGCTCATGCACCGTGTCAAGGGCATTGGT < 41bp 0.497255631362788 0.720825484562227 0.0647935 0.05387506 prediction 0.441650969124455 Functional Gain - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43488147 chr6:43488150 nonsynonymous SNV 0.992 3 24 hm5C_associated_SNPs_119299 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr6:43488131-43488158
64251 chr19 11098454 11098454 1 + C T UCEC 11098453 + 11098433 11098473 41 CGTCCCACCCGCCGCCTCGCCCGTGATGCCACCGCAGACCC CGTCCCACCCGCCGCCTCGCCTGTGATGCCACCGCAGACCC < 41bp 0.494324479659618 0.720822855742857 0.22846708 0.07425669 prediction 0.441645711485713 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11098453 chr19:11098454 synonymous SNV . 0 22 hm5C_associated_SNPs_119302 1 0 2 GRWD1 POSTAR2 ENCODE chr19:11098420-11098506
64251 chrX 48123281 48123281 1 + C A LUSC 48123280 + 48123260 48123300 41 GAGTGTCAGAAGCATCTGGCCCACAAAACGATGGGAAACAA GAGTGTCAGAAGCATCTGGCCAACAAAACGATGGGAAACAA < 41bp 0.461382159152213 0.72081685764323 0.15362707 0.39146057 prediction 0.44163371528646 Functional Gain - SSX1 ENSG00000126752 CDS Human protein_coding chrX:48123280 chrX:48123281 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_119303 0 0 2 LARP4 POSTAR2 ENCODE chrX:48123255-48123322
64251 chr22 42052982 42052982 1 + C T SKCM 42052981 + 42052961 42053001 41 CTGAAAAAATCATGGCAACTCCAGAGCAGGTGGGCAAGATG CTGAAAAAATCATGGCAACTCTAGAGCAGGTGGGCAAGATG < 41bp 0.601295467019753 0.822112250026944 0.754799 0.41816217 prediction 0.441633566014382 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42052981 chr22:42052982 nonsynonymous SNV 0.275 0 22 hm5C_associated_SNPs_119304 0 0 32 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:42052940-42053000
64251 chr12 12870877 12870877 1 + C T SKCM 12870876 + 12870856 12870896 41 CCTGCAGGAACCTCTTCGGCCCGGTGGACCACGAAGAGTTA CCTGCAGGAACCTCTTCGGCCTGGTGGACCACGAAGAGTTA < 41bp 0.528340064156729 0.74915623291257 0.8973213 0.51615554 prediction 0.441632337511682 Functional Gain - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12870876 chr12:12870877 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_119306 1 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:12870857-12870954
64251 chr7 97822174 97822174 1 + A G UCEC 97822171 + 97822151 97822191 41 GACGATACAGATGTCATGCTCACAGGTGACACTTTGAGCAC GACGATACAGATGTCATGCTCACGGGTGACACTTTGAGCAC < 41bp 0.469324848437206 0.720801775869234 0.30783027 0.9269923 prediction 0.441603551738469 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822171 chr7:97822174 synonymous SNV . 0 24 hm5C_associated_SNPs_119308 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr7:97822152-97822190
64251 chr11 640089 640089 1 + C A rs574074394 640085 + 640065 640105 41 TCCCTGCGGCCCCGACTGTGCGCCCGCCGCGCCCAGCCTCC TCCCTGCGGCCCCGACTGTGCGCCAGCCGCGCCCAGCCTCC < 41bp 0.702096936510693 0.922884197986087 0.19399208 0.56562006 prediction 0.441574522950787 Functional Gain - DRD4 ENSG00000069696 CDS Human protein_coding chr11:640085 chr11:640089 synonymous SNV . 0 25 hm5C_associated_SNPs_119318 0 0 2 FAM120A POSTAR2 ENCODE chr11:640037-640097
64251 chr2 101587509 101587509 1 + C T UCEC 101587508 + 101587488 101587528 41 GGCTCTGGAAGACCCGCCATCCGAGGCCCTCCACTCCTCAG GGCTCTGGAAGACCCGCCATCTGAGGCCCTCCACTCCTCAG < 41bp 0.558074453362482 0.77886017529725 0.91627437 0.24553141 prediction 0.441571443869537 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101587508 chr2:101587509 synonymous SNV . 0 22 hm5C_associated_SNPs_119319 0 0 2 PPIG POSTAR2 ENCODE chr2:101587444-101587543
64251 chr17 20000071 20000071 1 + A G LUAD 20000068 + 20000048 20000088 41 CTCTTCCGGCATGAAGAGTTCTAAGTCTTCAACTTCCTTGG CTCTTCCGGCATGAAGAGTTCTAGGTCTTCAACTTCCTTGG < 41bp 0.471171283186437 0.720785618913562 0.09243959 0.16831702 prediction 0.441571237827125 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20000068 chr17:20000071 nonsynonymous SNV 0.970 0 24 hm5C_associated_SNPs_119320 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:20000066-20000098
64251 chr2 96932184 96932184 1 + C A PAAD 96932183 + 96932163 96932203 41 CCCCGCGGGGACCCTGCTGGCCTCGTGCGGCGGCGACCGGA CCCCGCGGGGACCCTGCTGGCATCGTGCGGCGGCGACCGGA < 41bp 0.580021259936804 0.800796606999718 0.09984127 0.25455046 prediction 0.441550694125828 Functional Gain - CIAO1 ENSG00000144021 CDS Human protein_coding chr2:96932183 chr2:96932184 synonymous SNV . 0 22 hm5C_associated_SNPs_119322 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:96932176-96932204
64251 chr16 89985956 89985956 1 + T C LGG 89985954 + 89985934 89985974 41 AGCAACGTGCTGGAGACGGCCGTCATCCTCCTGCTGGAGGC AGCAACGTGCTGGAGACGGCCGCCATCCTCCTGCTGGAGGC < 41bp 0.604085796927117 0.824861060446345 0.0601449 0.16550297 prediction 0.441550527038456 Functional Gain - MC1R ENSG00000198211;ENSG00000258839 CDS Human other chr16:89985954 chr16:89985956 nonsynonymous SNV 0.002 1 23 hm5C_associated_SNPs_119323 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:89985948-89985984
64251 chr7 102040048 102040048 1 + C T OV 102040047 + 102040027 102040067 41 CACGTGTACAGACATCTGCGCCGGAGAGAATATCAGCGACA CACGTGTACAGACATCTGCGCTGGAGAGAATATCAGCGACA < 41bp 0.571307396623136 0.792077377849216 0.84773207 0.6786345 prediction 0.441539962452159 Functional Gain - PRKRIP1 ENSG00000128563 CDS Human protein_coding chr7:102040047 chr7:102040048 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_119326 0 0 16 NOP58 POSTAR2 GSE43666,GSM1067862 chr7:102040032-102040070
64251 chr16 88873788 88873788 1 + C T UCEC 88873787 + 88873767 88873807 41 GAACGGCTGCCTGAGCTGGCCCGCGTGCTGCGGAGCGTCTT GAACGGCTGCCTGAGCTGGCCTGCGTGCTGCGGAGCGTCTT < 41bp 0.475092143461691 0.720768170858506 0.3741863 0.4072349 prediction 0.441536341717012 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873787 chr16:88873788 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_119328 0 0 3 METAP2 POSTAR2 ENCODE chr16:88873779-88873808
64251 chr22 44547418 44547418 1 + A G rs149608527 44547415 + 44547395 44547435 41 CAAGCTGAATTTGGAGGTGACGGAACTGGAGACCCAGGTAT CAAGCTGAATTTGGAGGTGACGGGACTGGAGACCCAGGTAT < 41bp 0.564655805035764 0.785415756244204 0.90521324 0.91337025 prediction 0.441519902416881 Functional Gain - PARVB ENSG00000188677 CDS Human protein_coding chr22:44547415 chr22:44547418 nonsynonymous SNV 0.908 2 24 hm5C_associated_SNPs_119331 0 0 1 DDX24 POSTAR2 ENCODE chr22:44547384-44547434
64251 chr17 1674355 1674355 1 + C T SKCM 1674354 + 1674334 1674374 41 CGAACAGAATCCATCATTCACCGGGCTCTCTACTATGACTT CGAACAGAATCCATCATTCACTGGGCTCTCTACTATGACTT < 41bp 0.565239396762699 0.785989540386384 0.8786426 0.77342784 prediction 0.441500287247369 Functional Gain - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1674354 chr17:1674355 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_119332 0 0 9 BUD13 POSTAR2 ENCODE chr17:1674264-1674376
64251 chr7 1131843 1131843 1 + C G GBM 1131839 + 1131819 1131859 41 GCTTCGACCGCTACATCGCCCTGGCCAGGGCCATGCGCTGC GCTTCGACCGCTACATCGCCCTGGGCAGGGCCATGCGCTGC < 41bp 0.641745435719588 0.862484684358225 0.17525381 0.37272578 prediction 0.441478497277275 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131839 chr7:1131843 nonsynonymous SNV 0.996 1 25 hm5C_associated_SNPs_119336 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1131797-1131845
64251 chr12 48919859 48919859 1 + T C UCEC 48919857 + 48919837 48919877 41 TATGCACCTTGTGTGGGGCTCATGGGGACTGGGCTTTCTGG TATGCACCTTGTGTGGGGCTCACGGGGACTGGGCTTTCTGG < 41bp 0.578558055708252 0.799296072363543 0.6206594 0.8380738 prediction 0.441476033310582 Functional Gain - OR8S1 ENSG00000197376 CDS Human protein_coding chr12:48919857 chr12:48919859 nonsynonymous SNV 0.025 3 23 hm5C_associated_SNPs_119337 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:48919843-48919881
64251 chr1 155838213 155838213 1 + A G LUSC 155838210 + 155838190 155838230 41 ATGCTAGGATCCCTCACCTTCTCAGTGGACTATAACTTCCC ATGCTAGGATCCCTCACCTTCTCGGTGGACTATAACTTCCC < 41bp 0.493706441477745 0.720731674245246 0.062118113 0.067729175 prediction 0.441463348490492 Functional Gain - SYT11 ENSG00000132718 CDS Human protein_coding chr1:155838210 chr1:155838213 synonymous SNV . 0 24 hm5C_associated_SNPs_119342 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917673 chr1:155838200-155838220
64251 chr5 96329619 96329619 1 + T C LGG 96329617 + 96329597 96329637 41 TCTGTATGACAGTAACACTTCTTCAATGGCGGATAGAAAGC TCTGTATGACAGTAACACTTCTCCAATGGCGGATAGAAAGC < 41bp 0.397107115612325 0.720720990142952 0.4691037 0.9631405 prediction 0.441441980285903 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96329617 chr5:96329619 nonsynonymous SNV 0.987 2 23 hm5C_associated_SNPs_119348 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr5:96329610-96329627
64251 chr4 155488870 155488870 1 + A G LUSC 155488867 + 155488847 155488887 41 TTCGTTCAATCCTGGAAAACCTGAGAAGCAAAATACAAAAG TTCGTTCAATCCTGGAAAACCTGGGAAGCAAAATACAAAAG < 41bp 0.544028163963842 0.76474137054788 0.07287365 0.13153172 prediction 0.441426413168076 Functional Gain - FGB ENSG00000171564 CDS Human protein_coding chr4:155488867 chr4:155488870 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_119350 0 0 1 LARP7 POSTAR2 ENCODE chr4:155488856-155488898
64251 chr15 64418402 64418402 1 + C T PRAD 64418401 + 64418381 64418421 41 GCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATAGGT GCTTCATTGTCCCTCCGCCCCTGGAGAAGAGCCTCATAGGT < 41bp 0.60482216753704 0.82553521338104 0.48351163 0.19853348 prediction 0.441426091688001 Functional Gain - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64418401 chr15:64418402 nonsynonymous SNV 0.966 4 22 hm5C_associated_SNPs_119351 0 0 6 AARS POSTAR2 ENCODE chr15:64418364-64418418
64251 chr6 89855983 89855983 1 + C T SKCM 89855982 + 89855962 89856002 41 GGCGGCCGAGCGGCTGGGGGCCCTGAGCCGCGCGATCTGGA GGCGGCCGAGCGGCTGGGGGCTCTGAGCCGCGCGATCTGGA < 41bp 0.524922769996789 0.745635438325928 0.67109156 0.7552283 prediction 0.441425336658279 Functional Gain - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89855982 chr6:89855983 synonymous SNV . 0 22 hm5C_associated_SNPs_119352 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:89855980-89856000
64251 chr5 150867599 150867599 1 + C T rs199863918 150867598 + 150867578 150867618 41 GGTCATCTCCCTGGTGGGCTCCGTGAGCAGCAGCGCCCTGG GGTCATCTCCCTGGTGGGCTCTGTGAGCAGCAGCGCCCTGG < 41bp 0.5494739632181 0.770179270470233 0.33465385 0.3617095 prediction 0.441410614504265 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150867598 chr5:150867599 synonymous SNV . 0 22 hm5C_associated_SNPs_119353 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:150867579-150867610
64251 chr6 33170149 33170149 1 + T C rs113198103 33170147 + 33170127 33170167 41 AAGGAGGACATGGTCACAGTCATGGACATGGACACGCTCAC AAGGAGGACATGGTCACAGTCACGGACATGGACACGCTCAC < 41bp 0.483817194209922 0.7207027613514 0.295357 0.15836662 prediction 0.4414055227028 Functional Gain - SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33170147 chr6:33170149 synonymous SNV . 0 23 hm5C_associated_SNPs_119356 0 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:33170051-33170203
64251 chr2 44079540 44079540 1 + C A LUSC 44079539 + 44079519 44079559 41 GCTTAGGCAGTGCGCTGACACCCGCGTGGGCAACATGTACG GCTTAGGCAGTGCGCTGACACACGCGTGGGCAACATGTACG < 41bp 0.60599458283972 0.82669452450327 0.14394963 0.13085118 prediction 0.441399883327101 Functional Gain - ABCG8 ENSG00000143921 CDS Human protein_coding chr2:44079539 chr2:44079540 synonymous SNV . 0 22 hm5C_associated_SNPs_119357 0 0 1 RPS3 POSTAR2 ENCODE chr2:44079506-44079586
64251 chr17 79974915 79974915 1 + C T SKCM 79974914 + 79974894 79974934 41 AGGAGGGGGCGCTGGTCCCCCCTGAGCCCATCCCAGGGACG AGGAGGGGGCGCTGGTCCCCCTTGAGCCCATCCCAGGGACG < 41bp 0.486236031875745 0.72069837259433 0.2255531 0.15821436 prediction 0.44139674518866 Functional Gain - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79974914 chr17:79974915 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_119358 0 0 9 DDX55 POSTAR2 ENCODE chr17:79974868-79974919
64251 chr11 65268409 65268409 1 + T G GBM 65268407 + 65268387 65268427 41 CTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTT CTCTTTTTCAGGCTTATACTCAGGAATCTTGTCTGAAGCTT < 41bp 0.407700830905833 0.720696246913952 0.37652203 0.90632725 prediction 0.441392493827903 Functional Gain - MALAT1;TALAM1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65268407 chr11:65268409 . . 0 23 hm5C_associated_SNPs_119359 0 0 129 PTBP1 POSTAR2 GSE19323,GSM480479 chr11:65268300-65268420
64251 chr6 32139186 32139186 1 - G A rs11964847 32139187 - 32139167 32139207 41 CCCACCCTGTGGTTCTGCAGCCCCAGTGCCAAGTACTTCTT CCCACCCTGTGGTTCTGCAGCTCCAGTGCCAAGTACTTCTT < 41bp 0.505182852106921 0.725873962513712 0.15286514 0.31407222 prediction 0.441382220813582 Functional Gain - AGPAT1 ENSG00000204310 CDS Human protein_coding chr6:32139187 chr6:32139186 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_119361 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:32139147-32139199
64251 chrX 18912363 18912363 1 - G T LUAD 18912364 - 18912344 18912384 41 GGGGGCATCATCCACGTGGACCAGATCGTGCAGATGGCCAG GGGGGCATCATCCACGTGGACAAGATCGTGCAGATGGCCAG < 41bp 0.59500743977728 0.815691283850665 0.03284979 0.052155316 prediction 0.441367688146771 Functional Gain - PHKA2 ENSG00000044446 CDS Human protein_coding chrX:18912364 chrX:18912363 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_119364 0 0 6 BUD13 POSTAR2 ENCODE chrX:18912344-18912381
64251 chr8 123964152 123964152 1 + C T STAD 123964151 + 123964131 123964171 41 CCACAACTCCAAGTTCCATCCCGGGGAGGCCAACTTCAAGC CCACAACTCCAAGTTCCATCCTGGGGAGGCCAACTTCAAGC < 41bp 0.574311662443904 0.79499256313158 0.8967727 0.5603745 prediction 0.441361801375352 Functional Gain - ZHX2 ENSG00000178764 CDS Human protein_coding chr8:123964151 chr8:123964152 synonymous SNV . 0 22 hm5C_associated_SNPs_119367 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr8:123964129-123964153
64251 chr5 1814555 1814555 1 + C T LUSC 1814554 + 1814534 1814574 41 GGCGGGGGAGCTCTTGGCCACCCAAAAGTGTATATAAACTT GGCGGGGGAGCTCTTGGCCACTCAAAAGTGTATATAAACTT < 41bp 0.450927155750234 0.720677447971207 0.05819592 0.11690053 prediction 0.441354895942415 Functional Gain - NDUFS6 ENSG00000145494 CDS Human protein_coding chr5:1814554 chr5:1814555 nonsynonymous SNV 0.346 5 22 hm5C_associated_SNPs_119369 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr5:1814409-1814558
64251 chr3 126676327 126676327 1 + C T UCEC 126676326 + 126676306 126676346 41 TCCACTGCTACCGAGATCGCCCGCATGAGGTGCTGCTGTGC TCCACTGCTACCGAGATCGCCTGCATGAGGTGCTGCTGTGC < 41bp 0.564795470979105 0.78546336971333 0.07615322 0.32885835 prediction 0.441335797468451 Functional Gain - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126676326 chr3:126676327 nonsynonymous SNV 0.602 0 22 hm5C_associated_SNPs_119372 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:126676318-126676352
64251 chr11 34158214 34158214 1 + T C UCEC 34158212 + 34158192 34158232 41 GTCAGCTTGTTGGAAGAGGTCATCACTCCCCGGAAGGACCT GTCAGCTTGTTGGAAGAGGTCACCACTCCCCGGAAGGACCT < 41bp 0.41520660235459 0.720665129835557 0.09462419 0.1037367 prediction 0.441330259671114 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34158212 chr11:34158214 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_119374 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:34158213-34158251
64251 chr3 30713392 30713392 1 + A G LUSC 30713389 + 30713369 30713409 41 GCCAACAACATCAACCACAACACAGAGCTGCTGCCCATTGA GCCAACAACATCAACCACAACACGGAGCTGCTGCCCATTGA < 41bp 0.478803951604568 0.720660060458337 0.122461736 0.20609415 prediction 0.441320120916674 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713389 chr3:30713392 synonymous SNV . 0 24 hm5C_associated_SNPs_119376 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:30713369-30713412
64251 chr19 36278576 36278576 1 + C T SKCM 36278575 + 36278555 36278595 41 CCCGGCTTCTTCTCCCCAGCCCCCAGGGAGTGCCTGCCACC CCCGGCTTCTTCTCCCCAGCCTCCAGGGAGTGCCTGCCACC < 41bp 0.455155775971504 0.720655158653728 0.15177998 0.9493365 prediction 0.441310317307457 Functional Gain - ARHGAP33 ENSG00000004777 CDS Human protein_coding chr19:36278575 chr19:36278576 nonsynonymous SNV 0.485 3 22 hm5C_associated_SNPs_119379 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:36278559-36278586
64251 chr7 44797513 44797513 1 + C T SKCM 44797512 + 44797492 44797532 41 GGTCCCCGGGGGCCTAGTGTCCCCGCTGGCATGAACCCTAC GGTCCCCGGGGGCCTAGTGTCTCCGCTGGCATGAACCCTAC < 41bp 0.609932879899965 0.830586523710685 0.3957978 0.77369475 prediction 0.44130728762144 Functional Gain - ZMIZ2 ENSG00000122515 CDS Human protein_coding chr7:44797512 chr7:44797513 nonsynonymous SNV 0.207 0 22 hm5C_associated_SNPs_119380 0 0 5 BUD13 POSTAR2 ENCODE chr7:44797497-44797514
64251 chr4 69978272 69978272 1 + C A COAD 69978271 + 69978251 69978291 41 TGGATTGAATTTGTCATGCGCCACAAAGGAGCTAAACACCT TGGATTGAATTTGTCATGCGCAACAAAGGAGCTAAACACCT < 41bp 0.481088100631533 0.720651686986075 0.022886097 0.028997868 prediction 0.441303373972149 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69978271 chr4:69978272 nonsynonymous SNV 0.912 0 22 hm5C_associated_SNPs_119381 0 0 2 SND1 POSTAR2 ENCODE chr4:69978262-69978312
64251 chrX 115590020 115590020 1 + C A UCEC 115590019 + 115589999 115590039 41 GCTTCTAACTGGGGTCCATACCTGGAACAACATCGTGGGGA GCTTCTAACTGGGGTCCATACATGGAACAACATCGTGGGGA < 41bp 0.469233710569976 0.720650240343575 0.094246686 0.24176389 prediction 0.44130048068715 Functional Gain - SLC6A14 ENSG00000087916 CDS Human other chrX:115590019 chrX:115590020 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_119384 0 0 2 SND1 POSTAR2 ENCODE chrX:115589978-115590047
64251 chr10 14939500 14939500 1 + T C PAAD 14939498 + 14939478 14939518 41 ATTAAAAGAATGAGTTTTGTCATGGAATATGTTGGAGAGGT ATTAAAAGAATGAGTTTTGTCACGGAATATGTTGGAGAGGT < 41bp 0.446415330657819 0.720643947750635 0.5073543 0.4553007 prediction 0.44128789550127 Functional Gain - SUV39H2 ENSG00000152455 CDS Human protein_coding chr10:14939498 chr10:14939500 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_119387 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:14939463-14939509
64251 chr5 31538694 31538694 1 + T C LIHC 31538691 + 31538671 31538711 41 GAATGCCAGACTGCTGCCAGCACTGGGGAAATTCTGGAAAT GAATGCCAGACTGCTGCCAGCACCGGGGAAATTCTGGAAAT < 41bp 0.504293056594357 0.724925110856823 0.080656886 0.07005128 prediction 0.441264108524931 Functional Gain - C5orf22 ENSG00000082213 CDS Human protein_coding chr5:31538691 chr5:31538694 synonymous SNV . 0 24 hm5C_associated_SNPs_119390 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:31538666-31538698
64251 chr12 12788822 12788822 1 + C T OV 12788821 + 12788801 12788841 41 AGTGCAAGAGAATGCCGAGCCCGAAAAAAGCTGAGATATCA AGTGCAAGAGAATGCCGAGCCTGAAAAAAGCTGAGATATCA < 41bp 0.598124897854975 0.818751259019171 0.19157708 0.15781206 prediction 0.441252722328391 Functional Gain - CREBL2 ENSG00000111269 CDS Human protein_coding chr12:12788821 chr12:12788822 stopgain 0.994 1 22 hm5C_associated_SNPs_119392 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr12:12788800-12788830
64251 chr17 57737878 57737878 1 + C T STAD 57737877 + 57737857 57737897 41 GGTGCTGAAGAACTCTTTGCCCGGAAATTTAATGCTCTTTT GGTGCTGAAGAACTCTTTGCCTGGAAATTTAATGCTCTTTT < 41bp 0.563221766981459 0.78384677293912 0.15390557 0.0302051 prediction 0.441250011915321 Functional Gain - CLTC ENSG00000141367 CDS Human protein_coding chr17:57737877 chr17:57737878 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119393 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:57737751-57737881
64251 chr16 69481158 69481158 1 + T C COAD 69481155 + 69481135 69481175 41 ATGCCAGAGAAATGCTAAAGCAGTACTACATTGGTGATATC ATGCCAGAGAAATGCTAAAGCAGCACTACATTGGTGATATC < 41bp 0.511518627248185 0.732142615311687 0.24346557 0.10490087 prediction 0.441247976127005 Functional Gain - CYB5B ENSG00000103018 CDS Human protein_coding chr16:69481155 chr16:69481158 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_119394 0 0 8 TARDBP POSTAR2 DRA001158,DRS012386 chr16:69481146-69481181
64251 chr6 160523575 160523575 1 + C T ESCA 160523574 + 160523554 160523594 41 GGGCTTTGACAGCGAGAATCCCGGGGACGACGGGCAGATGC GGGCTTTGACAGCGAGAATCCTGGGGACGACGGGCAGATGC < 41bp 0.511235321023088 0.731856900920041 0.9388573 0.8944449 prediction 0.441243159793905 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160523574 chr6:160523575 synonymous SNV . 0 22 hm5C_associated_SNPs_119395 0 0 6 RPS3 POSTAR2 ENCODE chr6:160523557-160523676
64251 chr19 37854243 37854243 1 + C T LUAD 37854242 + 37854222 37854262 41 AAATCAACCCTGAGCACGCACCAGAGGACACACTCAGGGGA AAATCAACCCTGAGCACGCACTAGAGGACACACTCAGGGGA < 41bp 0.565851973952654 0.786469022845293 0.40320984 0.10528603 prediction 0.441234097785278 Functional Gain - HKR1 ENSG00000181666 CDS Human protein_coding chr19:37854242 chr19:37854243 stopgain 0.996 0 22 hm5C_associated_SNPs_119399 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37854188-37854295
64251 chr6 44275062 44275062 1 - G A UCEC 44275063 - 44275043 44275083 41 GGGCGCACAGACACAGCGTACCGCGTGGTGGCTGACCACAT GGGCGCACAGACACAGCGTACTGCGTGGTGGCTGACCACAT < 41bp 0.45823278027108 0.720616119588457 0.35670325 0.19848901 prediction 0.441232239176914 Functional Gain - AARS2 ENSG00000124608 CDS Human protein_coding chr6:44275063 chr6:44275062 nonsynonymous SNV 0.749 4 22 hm5C_associated_SNPs_119400 0 0 1 BUD13 POSTAR2 ENCODE chr6:44275061-44275133
64251 chr3 10167974 10167974 1 + A G STAD 10167971 + 10167951 10167991 41 AGGTGACAAAAGGTGAGACACTCACCTAGAACAGTGCCGTG AGGTGACAAAAGGTGAGACACTCGCCTAGAACAGTGCCGTG < 41bp 0.518001216210573 0.738611341160661 0.22659427 0.46920577 prediction 0.441220249900174 Functional Gain - BRK1 ENSG00000254999;ENSG00000254999 exonic;splicing Human other chr3:10167971 chr3:10167974 nonsynonymous SNV 0.928 1 24 hm5C_associated_SNPs_119401 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:10167958-10167979
64251 chr1 87805833 87805833 1 + T C LUAD 87805831 + 87805811 87805851 41 CATGATAGACCTACAGCTCTCATCAATGGCCATTTGAATTC CATGATAGACCTACAGCTCTCACCAATGGCCATTTGAATTC < 41bp 0.647959778005762 0.868560912885818 0.096836954 0.054105878 prediction 0.441202269760114 Functional Gain - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805831 chr1:87805833 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_119405 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:87805781-87805870
64251 chr6 56917834 56917834 1 + T C STAD 56917832 + 56917812 56917852 41 CGAAAGCAGAAAAGCATGTCCATGTGTCCAAGGAATGGATT CGAAAGCAGAAAAGCATGTCCACGTGTCCAAGGAATGGATT < 41bp 0.459679178996607 0.720600329909102 0.059480995 0.06251636 prediction 0.441200659818203 Functional Gain - KIAA1586 ENSG00000168116 CDS Human protein_coding chr6:56917832 chr6:56917834 synonymous SNV . 0 23 hm5C_associated_SNPs_119407 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:56917820-56917844
64251 chr11 61503251 61503251 1 + C T SKCM 61503250 + 61503230 61503270 41 CGGGTGATGCTGAGCGCCTCCCCGTGGAGGGGCACCACGGC CGGGTGATGCTGAGCGCCTCCTCGTGGAGGGGCACCACGGC < 41bp 0.453998479984199 0.72054494756593 0.3271643 0.21301782 prediction 0.441089895131861 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61503250 chr11:61503251 nonsynonymous SNV 0.922 3 22 hm5C_associated_SNPs_119421 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:61503245-61503277
64251 chr12 16112797 16112797 1 + C T UCEC 16112796 + 16112776 16112816 41 CGCCGTTTGTGTTTATCCCGCCCGGGTGTGTGATGCTGTAA CGCCGTTTGTGTTTATCCCGCTCGGGTGTGTGATGCTGTAA < 41bp 0.598527060165963 0.81906529657651 0.05741602 0.0210706 prediction 0.441076472821094 Functional Gain - DERA ENSG00000023697 CDS Human protein_coding chr12:16112796 chr12:16112797 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_119426 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:16112772-16112822
64251 chr12 69986785 69986785 1 + T C rs201962311 69986782 + 69986762 69986802 41 GGTTCCCGGGTAAGAGTTGACTCTACAGCAAAGGTTGCAGA GGTTCCCGGGTAAGAGTTGACTCCACAGCAAAGGTTGCAGA < 41bp 0.554773258360807 0.775310039457105 0.89400077 0.90733594 prediction 0.441073562192596 Functional Gain - CCT2 ENSG00000166226 CDS Human protein_coding chr12:69986782 chr12:69986785 synonymous SNV . 0 24 hm5C_associated_SNPs_119427 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:69986738-69986799
64251 chr4 123814308 123814308 1 + C T rs1048201 123814307 + 123814287 123814327 41 CCAGGATTTGTGTGCTGTTGCCGAATACTCAGGACGGACCT CCAGGATTTGTGTGCTGTTGCTGAATACTCAGGACGGACCT < 41bp 0.51898513925132 0.739517801436045 0.50887877 0.56238675 prediction 0.44106532436945 Functional Gain - NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814307 chr4:123814308 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_119428 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:123814296-123814347
64251 chr16 2546185 2546185 1 + A G GBM 2546182 + 2546162 2546202 41 GGATACAACTGCTTCGTGGACAAAGACAAGATGGACGCTGC GGATACAACTGCTTCGTGGACAAGGACAAGATGGACGCTGC < 41bp 0.544461754090135 0.764986742196675 0.18573815 0.28354484 prediction 0.44104997621308 Functional Gain - TBC1D24 ENSG00000162065;ENSG00000260272 CDS Human other chr16:2546182 chr16:2546185 synonymous SNV . 0 24 hm5C_associated_SNPs_119432 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:2546168-2546206
64251 chr15 85326217 85326217 1 + C A GBM 85326216 + 85326196 85326236 41 GCTCAGATCTGCCTCCAGATCCCCACAACTGTGGGAAATTT GCTCAGATCTGCCTCCAGATCACCACAACTGTGGGAAATTT < 41bp 0.46485215229027 0.720520021155726 0.049023777 0.069325 prediction 0.441040042311452 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85326216 chr15:85326217 nonsynonymous SNV 0.924 1 22 hm5C_associated_SNPs_119433 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:85326195-85326241
64251 chr1 229770863 229770863 1 + A G KIRP 229770860 + 229770840 229770880 41 GCCCGAAGGAGCTGTGGTAGCCCAGTTGTTTGAGGTCATTC GCCCGAAGGAGCTGTGGTAGCCCGGTTGTTTGAGGTCATTC < 41bp 0.574567695287261 0.7950848325515 0.11740643 0.33831102 prediction 0.441034274528479 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229770860 chr1:229770863 nonsynonymous SNV 0.093 1 24 hm5C_associated_SNPs_119434 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:229770860-229770880
64251 chr8 22865037 22865037 1 + C T UCEC 22865036 + 22865016 22865056 41 TCCATCCAGCCGGGGCCCTTCCGGGCTGTCCTCAAGTACCT TCCATCCAGCCGGGGCCCTTCTGGGCTGTCCTCAAGTACCT < 41bp 0.5922706468335 0.812782971518423 0.6385363 0.19304761 prediction 0.441024649369847 Functional Gain - RHOBTB2 ENSG00000008853 CDS Human protein_coding chr8:22865036 chr8:22865037 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119439 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr8:22865010-22865043
64251 chr13 76135013 76135013 1 + A G LUAD 76135010 + 76134990 76135030 41 CTTACTTCTCTTTCCTATTACAGAAAAGGTAATTGTTATGT CTTACTTCTCTTTCCTATTACAGGAAAGGTAATTGTTATGT < 41bp 0.517370797593271 0.737881643430877 0.31892002 0.76329863 prediction 0.441021691675212 Functional Gain - UCHL3 ENSG00000118939 CDS Human protein_coding chr13:76135010 chr13:76135013 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_119440 0 0 2 UCHL5 POSTAR2 ENCODE chr13:76134921-76135018
64251 chr8 125464090 125464090 1 + C T CESC 125464089 + 125464069 125464109 41 AATATTGCAGATAGGGTGATCCTGGGGCTGATTCCCAGCTC AATATTGCAGATAGGGTGATCTTGGGGCTGATTCCCAGCTC < 41bp 0.527123302852165 0.747594037817612 0.9272478 0.9122319 prediction 0.440941469930894 Functional Gain - TRMT12 ENSG00000183665 CDS Human protein_coding chr8:125464089 chr8:125464090 synonymous SNV . 0 22 hm5C_associated_SNPs_119453 0 0 1 RBM15 POSTAR2 ENCODE chr8:125464070-125464122
64251 chr2 207170180 207170180 1 + C T SKCM 207170179 + 207170159 207170199 41 CCTTCCAAATTAGCAGTAAACCCGAATAAAACTGACATGCC CCTTCCAAATTAGCAGTAAACTCGAATAAAACTGACATGCC < 41bp 0.535921026396531 0.756382697576395 0.056730717 0.10823551 prediction 0.440923342359728 Functional Gain - ZDBF2 ENSG00000204186 CDS Human protein_coding chr2:207170179 chr2:207170180 nonsynonymous SNV 0.009 0 22 hm5C_associated_SNPs_119459 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:207170180-207170181
64251 chr15 59359017 59359017 1 + T G LUSC 59359014 + 59358994 59359034 41 AACGGAAACTGGCCCTCCTGCAATGCCAAGGTTACCTTCCT AACGGAAACTGGCCCTCCTGCAAGGCCAAGGTTACCTTCCT < 41bp 0.321056025097192 0.720460842063856 0.07345694 0.4844224 prediction 0.440921684127712 Functional Gain - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59359014 chr15:59359017 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_119461 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr15:59359016-59359017
64251 chr14 90455406 90455406 1 + C T UCEC 90455405 + 90455385 90455425 41 TGGGGAAGGAAAGCAAGACTCCAGGAAAAAGCTCTGTTCCT TGGGGAAGGAAAGCAAGACTCTAGGAAAAAGCTCTGTTCCT < 41bp 0.529520712144114 0.749977108242481 0.4437402 0.32969856 prediction 0.440912792196734 Functional Gain - TDP1 ENSG00000042088 CDS Human protein_coding chr14:90455405 chr14:90455406 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_119464 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:90455399-90455427
64251 chr19 6535080 6535080 1 + T C rs2234182 6535078 + 6535058 6535098 41 CTTCACCGAGGTCGGAATAACGTCCAGCCTGGGTGCAGCCC CTTCACCGAGGTCGGAATAACGCCCAGCCTGGGTGCAGCCC < 41bp 0.560143598652428 0.780592752572107 0.06015107 0.015837878 prediction 0.440898307839359 Functional Gain - TNFSF9 ENSG00000125657 UTR3 Human protein_coding chr19:6535078 chr19:6535080 . . 0 23 hm5C_associated_SNPs_119467 0 0 1 IGF2BP2 POSTAR2 ENCODE chr19:6534971-6535087
64251 chr6 32822041 32822041 1 + C T CESC 32822040 + 32822020 32822060 41 GAGCACCAACCGGGGACTTACCCCGGGCGGGAGAAGTCCAC GAGCACCAACCGGGGACTTACTCCGGGCGGGAGAAGTCCAC < 41bp 0.513831580460054 0.73428061095179 0.88771147 0.90189654 prediction 0.440898060983473 Functional Gain - PSMB9 ENSG00000240065 CDS Human protein_coding chr6:32822040 chr6:32822041 nonsynonymous SNV 0.015 0 22 hm5C_associated_SNPs_119468 0 0 1 DDX3X POSTAR2 ENCODE chr6:32821964-32822050
64251 chr2 11721014 11721014 1 + C T SARC 11721013 + 11720993 11721033 41 TGCTCTTCTTTGGGCCAAGGCCAGAGGGGGCATGGGAGCTG TGCTCTTCTTTGGGCCAAGGCTAGAGGGGGCATGGGAGCTG < 41bp 0.494117491384041 0.720446340329551 0.8451178 0.477069 prediction 0.440892680659102 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11721013 chr2:11721014 synonymous SNV . 0 22 hm5C_associated_SNPs_119470 0 0 2 EFTUD2 POSTAR2 ENCODE chr2:11720961-11721137
64251 chr7 148395986 148395986 1 + C G rs565460200 148395982 + 148395962 148396002 41 GGAGGAGGCGGGCGCCGTGTCGCACGCAGCTCCAGGCGGGG GGAGGAGGCGGGCGCCGTGTCGCAGGCAGCTCCAGGCGGGG < 41bp 0.628560037273714 0.848993931906702 0.15558904 0.6363028 prediction 0.440867789265976 Functional Gain - CUL1 ENSG00000055130 intronic Human protein_coding chr7:148395982 chr7:148395986 . . 0 25 hm5C_associated_SNPs_119478 0 0 11 DDX3X POSTAR2 ENCODE chr7:148395972-148396009
64251 chr11 64875061 64875061 1 + C T UCEC 64875060 + 64875040 64875080 41 CCTGCCCTCCTAGACACCATCCGGAAGATGAAGAACGATTT CCTGCCCTCCTAGACACCATCTGGAAGATGAAGAACGATTT < 41bp 0.584465109169219 0.804898058155039 0.88217705 0.8619437 prediction 0.44086589797164 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64875060 chr11:64875061 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_119480 0 0 1 BUD13 POSTAR2 ENCODE chr11:64875010-64875062
64251 chr19 33465048 33465048 1 + T C UCEC 33465045 + 33465025 33465065 41 CCCAGCCCTACAGAAGTTTACTGTGCTGGACCTTGGAATGG CCCAGCCCTACAGAAGTTTACTGCGCTGGACCTTGGAATGG < 41bp 0.506187351487837 0.726616104590921 0.06240478 0.054398 prediction 0.440857506206167 Functional Gain - FAAP24 ENSG00000131944 CDS Human protein_coding chr19:33465045 chr19:33465048 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_119484 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:33465043-33465064
64251 chr5 68551764 68551764 1 + C G rs141434516 68551760 + 68551740 68551780 41 TCCTGGGTTCCAGTGATTCTCTCACTTCAGCCTCCCAAGTA TCCTGGGTTCCAGTGATTCTCTCAGTTCAGCCTCCCAAGTA < 41bp 0.43200142028928 0.720428092519406 0.20923305 0.45574537 prediction 0.440856185038812 Functional Gain - CDK7 ENSG00000134058 intronic Human protein_coding chr5:68551760 chr5:68551764 . . 0 25 hm5C_associated_SNPs_119486 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr5:68551763-68551764
64251 chr14 24909436 24909436 1 - G A rs7157920 24909437 - 24909417 24909457 41 CCGAGCCTTCATCCCTCTCCCCAGCGCTGTGGTGCAAGCTG CCGAGCCTTCATCCCTCTCCCTAGCGCTGTGGTGCAAGCTG < 41bp 0.484305649193721 0.720425920225548 0.11395639 0.0966492 prediction 0.440851840451095 Functional Gain - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909437 chr14:24909436 synonymous SNV . 0 22 hm5C_associated_SNPs_119489 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:24909409-24909454
64251 chr12 121437221 121437221 1 + T C rs1169304 121437219 + 121437199 121437239 41 TCCAGGCCTGCTGGCCCTCCCTTGGCCTGTGACAGAGCCCC TCCAGGCCTGCTGGCCCTCCCTCGGCCTGTGACAGAGCCCC < 41bp 0.590440488486016 0.810865848431127 0.091064095 0.23639876 prediction 0.440850719890223 Functional Gain - HNF1A ENSG00000135100 CDS Human protein_coding chr12:121437219 chr12:121437221 nonsynonymous SNV 0.000 2 23 hm5C_associated_SNPs_119490 1 0 1 PRPF8 POSTAR2 ENCODE chr12:121437174-121437231
64251 chr1 158065245 158065245 1 + C A rs182057331 158065241 + 158065221 158065261 41 TTAGCATTCCCTTTCTATCCCACCCCTCTGATCTCCCATAA TTAGCATTCCCTTTCTATCCCACCACTCTGATCTCCCATAA < 41bp 0.309049527895301 0.720424609967307 0.04384342 0.09796411 prediction 0.440849219934615 Functional Gain - KIRREL ENSG00000183853 UTR3 Human protein_coding chr1:158065241 chr1:158065245 . . 0 25 hm5C_associated_SNPs_119491 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158065214-158065261
64251 chr1 97243177 97243177 1 + C A COAD 97243176 + 97243156 97243196 41 CTTCAAGCTGTGACAGCTGTCCAGACAGCAAATACTCCTCT CTTCAAGCTGTGACAGCTGTCAAGACAGCAAATACTCCTCT < 41bp 0.541331560228508 0.761754815107602 0.36872774 0.8857846 prediction 0.440846509758188 Functional Gain - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97243176 chr1:97243177 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_119492 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:97243163-97243183
64251 chr10 103908243 103908243 1 + C T THCA 103908242 + 103908222 103908262 41 TTCTCGAAGCCGCTCACGATCCCCATCCCCCCGCCGGAGAA TTCTCGAAGCCGCTCACGATCTCCATCCCCCCGCCGGAGAA < 41bp 0.637296804548404 0.857719569413218 0.019322932 0.9465549 prediction 0.440845529729629 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103908242 chr10:103908243 synonymous SNV . 0 22 hm5C_associated_SNPs_119493 0 0 2 PCBP2 POSTAR2 ENCODE chr10:103908199-103908243
64251 chr19 35530897 35530897 1 + C G rs72550275 35530893 + 35530873 35530913 41 TCCTCCAGCTCCTGCCCCGCCGGCCGCGCACCGCCATGCAT TCCTCCAGCTCCTGCCCCGCCGGCGGCGCACCGCCATGCAT < 41bp 0.640423610112094 0.860841775299364 0.19546434 0.73594093 prediction 0.440836330374539 Functional Gain - SCN1B ENSG00000105711 UTR3 Human protein_coding chr19:35530893 chr19:35530897 . . 0 25 hm5C_associated_SNPs_119498 0 0 3 RBFOX2 POSTAR2 ENCODE chr19:35530839-35530931
64251 chr19 42795390 42795390 1 + C T LGG 42795389 + 42795369 42795409 41 GGCAAGGCTGGGGGAATCACCCAGGTACAGTACATCCTGCC GGCAAGGCTGGGGGAATCACCTAGGTACAGTACATCCTGCC < 41bp 0.541777776799294 0.762188882685297 0.9103811 0.898913 prediction 0.440822211772006 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42795389 chr19:42795390 stopgain 1.000 0 22 hm5C_associated_SNPs_119501 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:42795383-42795407
64251 chr2 149528411 149528411 1 + T A SKCM 149528407 + 149528387 149528427 41 ATGTGAAAATTCAGAATTGGCAGATTTGGATAAGTTGAGGT ATGTGAAAATTCAGAATTGGCAGAATTGGATAAGTTGAGGT < 41bp 0.402504772548126 0.720410772053063 0.36321938 0.23883429 prediction 0.440821544106126 Functional Gain - EPC2 ENSG00000135999 CDS Human protein_coding chr2:149528407 chr2:149528411 nonsynonymous SNV 0.995 0 25 hm5C_associated_SNPs_119502 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:149528381-149528417
64251 chr19 50002862 50002862 1 + C T OV 50002861 + 50002841 50002881 41 GCTCAAGGTCACCAAGGCTGCCGGCACCAAGAAGCAGTTCC GCTCAAGGTCACCAAGGCTGCTGGCACCAAGAAGCAGTTCC < 41bp 0.527285099248388 0.747694343236791 0.17905828 0.09442964 prediction 0.440818487976805 Functional Gain - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50002861 chr19:50002862 synonymous SNV . 0 22 hm5C_associated_SNPs_119505 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:50002766-50002929
64251 chr3 32745388 32745388 1 + A G BLCA 32745385 + 32745365 32745405 41 GGAGCAGAGAAACATGAAGGCACAGGTCAGTCCTCTGGGAT GGAGCAGAGAAACATGAAGGCACGGGTCAGTCCTCTGGGAT < 41bp 0.545281861451856 0.765677993784902 0.4103789 0.87893665 prediction 0.440792264666091 Functional Gain - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32745385 chr3:32745388 synonymous SNV . 0 24 hm5C_associated_SNPs_119510 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:32745357-32745392
64251 chr20 18295755 18295755 1 + C T STAD 18295754 + 18295734 18295774 41 ACCTCGATCCTTTCTGCCCTCCGGGTTTCTCCAGTCAGAAA ACCTCGATCCTTTCTGCCCTCTGGGTTTCTCCAGTCAGAAA < 41bp 0.521976432530377 0.742366364829873 0.91755164 0.22031042 prediction 0.440779864598992 Functional Gain - ZNF133 ENSG00000125846 CDS Human protein_coding chr20:18295754 chr20:18295755 nonsynonymous SNV 0.078 0 22 hm5C_associated_SNPs_119511 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:18295738-18295773
64251 chr11 47296535 47296535 1 + C T SKCM 47296534 + 47296514 47296554 41 CAGTCTCCTCGGGGCAAACGCCGGGCCAAGGCGGGGAGCCG CAGTCTCCTCGGGGCAAACGCTGGGCCAAGGCGGGGAGCCG < 41bp 0.542855632843232 0.76324210845505 0.9230547 0.9116806 prediction 0.440772951223635 Functional Gain - MADD ENSG00000110514 CDS Human protein_coding chr11:47296534 chr11:47296535 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_119513 0 0 1 DDX24 POSTAR2 ENCODE chr11:47296484-47296536
64251 chr6 3078132 3078132 1 + T C UCEC 3078130 + 3078110 3078150 41 TACTCCCTGGTGATGGAGTACATGGAGAAGGGCAACCTGAT TACTCCCTGGTGATGGAGTACACGGAGAAGGGCAACCTGAT < 41bp 0.502856469894504 0.723211200455736 0.4562891 0.35340658 prediction 0.440709461122464 Functional Gain - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3078130 chr6:3078132 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_119525 0 0 3 WDR33 POSTAR2 GSE61123,GSM1496985 chr6:3078130-3078151
64251 chr7 100732060 100732060 1 + C T HNSC 100732059 + 100732039 100732079 41 GGACGGCTCTGGCCTCCTCCCCAGACCCATCTTTTACTGCA GGACGGCTCTGGCCTCCTCCCTAGACCCATCTTTTACTGCA < 41bp 0.57647380810239 0.796818662523228 0.20319527 0.102704376 prediction 0.440689708841676 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732059 chr7:100732060 synonymous SNV . 0 22 hm5C_associated_SNPs_119528 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100732007-100732076
64251 chr7 100867054 100867054 1 + C T SKCM 100867053 + 100867033 100867073 41 CTGTCTGTGGCTTCCCATCCCCCTACACCTGTGTCAGCTGC CTGTCTGTGGCTTCCCATCCCTCTACACCTGTGTCAGCTGC < 41bp 0.448405472026461 0.720341675990125 0.010183662 0.712564 prediction 0.440683351980251 Functional Gain - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100867053 chr7:100867054 nonsynonymous SNV 0.987 1 22 hm5C_associated_SNPs_119529 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:100866981-100867081
64251 chr17 42152707 42152707 1 + C T COAD 42152706 + 42152686 42152726 41 CTGGGCTGGCTGATGACTCCCCGAGTGCCTATGGAGCGGGA CTGGGCTGGCTGATGACTCCCTGAGTGCCTATGGAGCGGGA < 41bp 0.472958869973365 0.720339839704425 0.16190991 0.055992007 prediction 0.44067967940885 Functional Gain - G6PC3 ENSG00000141349 CDS Human protein_coding chr17:42152706 chr17:42152707 stopgain 0.986 0 22 hm5C_associated_SNPs_119530 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:42152683-42152708
64251 chr6 111580603 111580603 1 + C G rs111515930 111580602 + 111580582 111580622 41 CGAAGTTCCTCTTCTCTGCCCCGGTTCCGGGCGGTCCGCTG CGAAGTTCCTCTTCTCTGCCCGGGTTCCGGGCGGTCCGCTG < 41bp 0.643971816907097 0.864309932295389 0.39265123 0.9039126 prediction 0.440676230776583 Functional Gain - MFSD4B ENSG00000173214 UTR5 Human protein_coding chr6:111580602 chr6:111580603 . . 0 22 hm5C_associated_SNPs_119532 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:111580586-111580610
64251 chr1 26597549 26597549 1 + C A SKCM 26597548 + 26597528 26597568 41 AGGAGACCAGTGGAGAAGGTCCAGAAGTGGAAATGGAGTCC AGGAGACCAGTGGAGAAGGTCAAGAAGTGGAAATGGAGTCC < 41bp 0.600708564190516 0.821043670026382 0.20308262 0.3282534 prediction 0.440670211671732 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26597548 chr1:26597549 nonsynonymous SNV 0.598 0 22 hm5C_associated_SNPs_119536 0 0 15 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr1:26597540-26597560
64251 chr6 138726283 138726283 1 + C T rs148433984 138726282 + 138726262 138726302 41 TTTTCTCTGTTCCACTTTAGCCCGGAAGTTATGAGATCCGA TTTTCTCTGTTCCACTTTAGCTCGGAAGTTATGAGATCCGA < 41bp 0.579820575322541 0.800145695657639 0.030790925 0.027371526 prediction 0.440650240670195 Functional Gain - HEBP2 ENSG00000051620 CDS Human protein_coding chr6:138726282 chr6:138726283 nonsynonymous SNV 0.962 1 22 hm5C_associated_SNPs_119539 0 0 5 RTCB POSTAR2 GSE38201,GSM936508 chr6:138726280-138726300
64251 chr2 183593668 183593668 1 + C T LGG 183593667 + 183593647 183593687 41 GGTGATGATAGAATGCTTTGCCGAATGAAAGGAGTCAACAG GGTGATGATAGAATGCTTTGCTGAATGAAAGGAGTCAACAG < 41bp 0.559917458282377 0.78023610874947 0.07931107 0.051861644 prediction 0.440637300934185 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183593667 chr2:183593668 stopgain 1.000 1 22 hm5C_associated_SNPs_119540 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr2:183593589-183593686
64251 chr6 7727783 7727783 1 + C G rs551211683 7727782 + 7727762 7727802 41 TCTGGCAGCGGCGGCGCGTCCCCACTGACCAGCGCGCAGGA TCTGGCAGCGGCGGCGCGTCCGCACTGACCAGCGCGCAGGA < 41bp 0.401305528928335 0.720298567659044 0.14076233 0.33006364 prediction 0.440597135318089 Functional Gain - BMP6 ENSG00000153162 CDS Human protein_coding chr6:7727782 chr6:7727783 nonsynonymous SNV 0.628 0 22 hm5C_associated_SNPs_119545 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7727740-7727805
64251 chrX 80532613 80532613 1 + C A LUAD 80532609 + 80532589 80532629 41 AAAATGTACCTGAAAATAGTCGACCAGCCACAGGTTACCCC AAAATGTACCTGAAAATAGTCGACAAGCCACAGGTTACCCC < 41bp 0.30640757142145 0.72029674869946 0.1294665 0.13771853 prediction 0.440593497398921 Functional Gain - SH3BGRL ENSG00000131171 CDS Human protein_coding chrX:80532609 chrX:80532613 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_119546 0 0 5 GRWD1 POSTAR2 ENCODE chrX:80532482-80532615
64251 chr3 30735156 30735156 1 + C A rs11466536 30735155 + 30735135 30735175 41 GCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGATACCA GCCTAGAAATTCCACTTGCACAGTAGGGCATGCTGATACCA < 41bp 0.564585318620037 0.784880812255194 0.024132341 0.18177119 prediction 0.440590987270315 Functional Gain - TGFBR2 ENSG00000163513 UTR3 Human protein_coding chr3:30735155 chr3:30735156 . . 0 22 hm5C_associated_SNPs_119547 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:30735147-30735174
64251 chr5 140589958 140589958 1 + C A UCEC 140589957 + 140589937 140589977 41 CAACTACTCGCTGCTGCCGTCCCAGGACCCGCACCTGCCCC CAACTACTCGCTGCTGCCGTCACAGGACCCGCACCTGCCCC < 41bp 0.452512963035399 0.720293454048346 0.3081513 0.6767581 prediction 0.440586908096691 Functional Gain - PCDHB12 ENSG00000120328 CDS Human protein_coding chr5:140589957 chr5:140589958 synonymous SNV . 0 22 hm5C_associated_SNPs_119549 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140589935-140589987
64251 chr19 11132437 11132437 1 + C T CESC 11132436 + 11132416 11132456 41 ATGATTGTGGACGAAGGTCACCGCATGAAGAACCACCACTG ATGATTGTGGACGAAGGTCACTGCATGAAGAACCACCACTG < 41bp 0.583878288315934 0.804170805162274 0.81498325 0.7868633 prediction 0.440585033692682 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11132436 chr19:11132437 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_119550 2 0 22 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:11132400-11132440
64251 chr2 27278858 27278858 1 + C T SKCM 27278857 + 27278837 27278877 41 TCAACAGTGTGTGGATTATGCCACAACAGTCTGCGGGGCTT TCAACAGTGTGTGGATTATGCTACAACAGTCTGCGGGGCTT < 41bp 0.57441711259901 0.794707680508473 0.20292419 0.7161263 prediction 0.440581135818926 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278857 chr2:27278858 nonsynonymous SNV 0.824 0 22 hm5C_associated_SNPs_119551 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:27278841-27278865
64251 chr21 45110302 45110302 1 + C A UCEC 45110298 + 45110278 45110318 41 CCAAGAGCAGCACTGCCACCCACCCTCCAGGCCCTGCCGTC CCAAGAGCAGCACTGCCACCCACCATCCAGGCCCTGCCGTC < 41bp 0.291315281876882 0.720290319599349 0.0111943185 0.047523946 prediction 0.440580639198699 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45110298 chr21:45110302 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_119552 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45110279-45110317
64251 chr6 126080483 126080483 1 + T G UCEC 126080481 + 126080461 126080501 41 ACCATCATCCGCTCCACCCGCATCACTGGGCCGCCGCCTTC ACCATCATCCGCTCCACCCGCAGCACTGGGCCGCCGCCTTC < 41bp 0.680188224382895 0.900462330823161 0.1287331 0.55928206 prediction 0.440548212880531 Functional Gain - HEY2 ENSG00000135547 CDS Human protein_coding chr6:126080481 chr6:126080483 nonsynonymous SNV 0.922 0 23 hm5C_associated_SNPs_119557 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:126080415-126080487
64251 chr13 88328655 88328655 1 + A G STAD 88328652 + 88328632 88328672 41 CCCCTAAGGGGACTCGCCAACCCAACAAGCCCAGGGTGCGC CCCCTAAGGGGACTCGCCAACCCGACAAGCCCAGGGTGCGC < 41bp 0.553631402749502 0.773891151225257 0.40103567 0.30653617 prediction 0.440519496951511 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328652 chr13:88328655 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_119562 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88328620-88328660
64251 chr9 34241378 34241378 1 + C A UCEC 34241377 + 34241357 34241397 41 ACAATGCCACCTCCTATTAACCCCATCCTCGCCAGCTTGCA ACAATGCCACCTCCTATTAACACCATCCTCGCCAGCTTGCA < 41bp 0.466586529908353 0.720257963875504 0.005119711 0.0037662685 prediction 0.440515927751008 Functional Gain - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34241377 chr9:34241378 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119563 0 0 8 EIF3G POSTAR2 GSE65004,GSM1585673 chr9:34241362-34241387
64251 chr6 111329254 111329254 1 + C A COAD 111329253 + 111329233 111329273 41 TTTTTTAGAACAGTAAATGTCCTGAGGGAACAAAACCCATG TTTTTTAGAACAGTAAATGTCATGAGGGAACAAAACCCATG < 41bp 0.477207386073197 0.720256823051425 0.2631898 0.37595057 prediction 0.440513646102849 Functional Gain - RPF2 ENSG00000197498 CDS Human protein_coding chr6:111329253 chr6:111329254 nonsynonymous SNV 0.963 3 22 hm5C_associated_SNPs_119565 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr6:111329240-111329287
64251 chr10 5963432 5963432 1 + A G OV 5963429 + 5963409 5963449 41 AGGTGGCATTAGAGGTGACGCAAAGGGGCAAGTGGCCTTGT AGGTGGCATTAGAGGTGACGCAAGGGGGCAAGTGGCCTTGT < 41bp 0.585954875199431 0.806203519984999 0.3625191 0.9052267 prediction 0.440497289571135 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5963429 chr10:5963432 nonsynonymous SNV 0.821 1 24 hm5C_associated_SNPs_119567 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:5963431-5963460
64251 chr19 19627025 19627025 1 + C A UCEC 19627024 + 19627004 19627044 41 TAAGTCACTTCCGCCCGGGACCGGAAGTGTGGGATACTGCG TAAGTCACTTCCGCCCGGGACAGGAAGTGTGGGATACTGCG < 41bp 0.475427600776154 0.720239887782655 0.44456983 0.3827095 prediction 0.44047977556531 Functional Gain - NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19627024 chr19:19627025 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_119571 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:19627020-19627100
64251 chr2 231742797 231742797 1 + A G UCEC 231742794 + 231742774 231742814 41 ACACCTTCGTGGTGGAGACGCTCATCTGCGGGGTGGTGTGA ACACCTTCGTGGTGGAGACGCTCGTCTGCGGGGTGGTGTGA < 41bp 0.569243044955576 0.789480204042327 0.28419113 0.23860312 prediction 0.440474318173501 Functional Gain - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231742794 chr2:231742797 nonsynonymous SNV 0.928 3 24 hm5C_associated_SNPs_119572 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:231742751-231742810
64251 chr19 50881418 50881418 1 + C T SKCM 50881417 + 50881397 50881437 41 CCACCCCAGTCATCCCAGATCCCGAAGAGGAACCAGAGCGC CCACCCCAGTCATCCCAGATCTCGAAGAGGAACCAGAGCGC < 41bp 0.590680933484776 0.810907392267103 0.26552823 0.40167475 prediction 0.440452917564653 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881417 chr19:50881418 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_119577 0 0 2 PRPF8 POSTAR2 ENCODE chr19:50881372-50881433
64251 chr19 10367465 10367465 1 + C A ESCA 10367464 + 10367444 10367484 41 CAGAAAGGCACTGGGCGGGCCCGGCATGGCAGCATCCGCTC CAGAAAGGCACTGGGCGGGCCAGGCATGGCAGCATCCGCTC < 41bp 0.597558620322362 0.817764131157218 0.3659066 0.84824735 prediction 0.440411021669711 Functional Gain - MRPL4 ENSG00000105364 CDS Human protein_coding chr19:10367464 chr19:10367465 synonymous SNV . 0 22 hm5C_associated_SNPs_119584 0 0 5 DDX24 POSTAR2 ENCODE chr19:10367424-10367503
64251 chr2 48809163 48809163 1 + C G LUSC 48809162 + 48809142 48809182 41 CCTTGAATGACCTTGAGTTGCCGAAGCGAGATGAATCCTAT CCTTGAATGACCTTGAGTTGCGGAAGCGAGATGAATCCTAT < 41bp 0.414406246091535 0.72019560203861 0.07437694 0.32249618 prediction 0.440391204077219 Functional Gain - STON1;STON1-GTF2A1L ENSG00000068781;ENSG00000243244 CDS Human other chr2:48809162 chr2:48809163 nonsynonymous SNV 0.358 0 22 hm5C_associated_SNPs_119587 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:48809146-48809171
64251 chr3 183885797 183885797 1 + T C UCEC 183885795 + 183885775 183885815 41 GCTGGCTTCATCCGCCATACCGTCAACAAGATCACCTTCTC GCTGGCTTCATCCGCCATACCGCCAACAAGATCACCTTCTC < 41bp 0.640759911999861 0.860951818082185 0.038979083 0.22235173 prediction 0.440383812164647 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183885795 chr3:183885797 nonsynonymous SNV 0.980 4 23 hm5C_associated_SNPs_119589 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:183885779-183885803
64251 chr5 131705723 131705723 1 + T A rs144020613 131705719 + 131705699 131705739 41 GCGAGTGGGGGCCCTTCCAGCGCCTCATCTTCTTCCTGCTC GCGAGTGGGGGCCCTTCCAGCGCCACATCTTCTTCCTGCTC < 41bp 0.676014821098031 0.896204303369725 0.24072039 0.15945515 prediction 0.440378964543388 Functional Gain - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131705719 chr5:131705723 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_119590 1 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:131705720-131705740
64251 chr1 161726587 161726587 1 + A G GBM 161726584 + 161726564 161726604 41 GCTTTATTTCAGCTTCTTTGCCCAAAATGCAGTGCCAAGTT GCTTTATTTCAGCTTCTTTGCCCGAAATGCAGTGCCAAGTT < 41bp 0.495757142973573 0.720187815663138 0.1739808 0.30145568 prediction 0.440375631326276 Functional Gain - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161726584 chr1:161726587 synonymous SNV . 0 24 hm5C_associated_SNPs_119592 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr1:161726568-161726595
64251 chr17 46628425 46628425 1 + C A LUAD 46628421 + 46628401 46628441 41 GCTCGTGTACGCCGTCCGCGCCCGCTTGGACGCCGCCGACC GCTCGTGTACGCCGTCCGCGCCCGATTGGACGCCGCCGACC < 41bp 0.702515908102348 0.922688582852228 0.59816015 0.39858878 prediction 0.44034534949976 Functional Gain - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628421 chr17:46628425 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_119596 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chr11 77301300 77301300 1 + T A OV 77301296 + 77301276 77301316 41 CGCTCGTCTACTTCTTCTCGCTTGTGCATGGCCTGACTCTG CGCTCGTCTACTTCTTCTCGCTTGAGCATGGCCTGACTCTG < 41bp 0.395387175027222 0.720169340544938 0.103984326 0.041069835 prediction 0.440338681089876 Functional Gain - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301296 chr11:77301300 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_119597 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr11:77301295-77301316
64251 chr3 32804301 32804301 1 + C G STAD 32804300 + 32804280 32804320 41 GATGCCATTACTCACTTGAACCCGGAGAATGTCACTGATGT GATGCCATTACTCACTTGAACGCGGAGAATGTCACTGATGT < 41bp 0.410817706527188 0.720148229912842 0.1266694 0.4370625 prediction 0.440296459825684 Functional Gain - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32804300 chr3:32804301 nonsynonymous SNV 0.990 4 22 hm5C_associated_SNPs_119604 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:32804251-32804383
64251 chr7 150749769 150749769 1 + C A UCEC 150749765 + 150749745 150749785 41 CTGTCTGTGTCCTCGGAGCCCCGCCCTGACATCCTGGACAT CTGTCTGTGTCCTCGGAGCCCCGCACTGACATCCTGGACAT < 41bp 0.310477348652789 0.720146756725972 0.0521937 0.092154175 prediction 0.440293513451944 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150749765 chr7:150749769 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_119606 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:150749739-150749788
64251 chr2 241531519 241531519 1 + C T UCEC 241531518 + 241531498 241531538 41 ACTTGTCGGCAGCTGCTCCACCTGAAGGACCAGTGTCTGAT ACTTGTCGGCAGCTGCTCCACTTGAAGGACCAGTGTCTGAT < 41bp 0.467139274098266 0.720136361254896 0.054940164 0.08139402 prediction 0.440272722509792 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241531518 chr2:241531519 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_119607 0 0 1 PPIG POSTAR2 ENCODE chr2:241531516-241531567
64251 chr1 61872334 61872334 1 + C G SKCM 61872330 + 61872310 61872350 41 CGATGGCCAGGCCTGTGCCTCTGCCGGTGCCAGACACAAAG CGATGGCCAGGCCTGTGCCTCTGCGGGTGCCAGACACAAAG < 41bp 0.439724451369967 0.720114804600564 0.22494763 0.20572081 prediction 0.440229609201128 Functional Gain - NFIA ENSG00000162599 CDS Human protein_coding chr1:61872330 chr1:61872334 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_119616 0 0 1 GRWD1 POSTAR2 ENCODE chr1:61872295-61872354
64251 chr7 73609074 73609074 1 + T C UCEC 73609072 + 73609052 73609092 41 TGTCCTGTTTCTTCCTCAGGCTTCAGGGATGACTTCTTAGG TGTCCTGTTTCTTCCTCAGGCTCCAGGGATGACTTCTTAGG < 41bp 0.412553946920048 0.720097930046911 0.16484374 0.6030505 prediction 0.440195860093821 Functional Gain - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73609072 chr7:73609074 nonsynonymous SNV 0.967 0 23 hm5C_associated_SNPs_119620 0 0 3 DDX55 POSTAR2 ENCODE chr7:73609070-73609151
64251 chr1 26496455 26496455 1 + C G rs2232648 26496454 + 26496434 26496474 41 CCCTGCTCCTGGCCCCTTGGCCGGCCGGGCTGTTTCTGGCC CCCTGCTCCTGGCCCCTTGGCGGGCCGGGCTGTTTCTGGCC < 41bp 0.569326671463014 0.789410308098722 0.10620001 0.8236934 prediction 0.440167273271416 Functional Gain - ZNF593 ENSG00000236782 ncRNA_exonic Human protein_coding chr1:26496454 chr1:26496455 . . 0 22 hm5C_associated_SNPs_119625 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:26496420-26496480
64251 chr18 56367823 56367823 1 + A G rs74847855 56367820 + 56367800 56367840 41 GCGACATCCCAGAGAGCTTCCAGAGTAAGTAACGAAAGAAG GCGACATCCCAGAGAGCTTCCAGGGTAAGTAACGAAAGAAG < 41bp 0.563690107611634 0.783767586806649 0.6529149 0.8774079 prediction 0.44015495839003 Functional Gain - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56367820 chr18:56367823 nonsynonymous SNV 0.777 0 24 hm5C_associated_SNPs_119629 0 0 1 PRPF8 POSTAR2 ENCODE chr18:56367808-56367866
64251 chr17 40125647 40125647 1 + C T rs34044046 40125646 + 40125626 40125666 41 TGTCACCCACTGACAACCTGCCGCGGGGGAGCCGCGCCCAC TGTCACCCACTGACAACCTGCTGCGGGGGAGCCGCGCCCAC < 41bp 0.589369838198393 0.809436992467826 0.15601444 0.055089176 prediction 0.440134308538866 Functional Gain - CNP ENSG00000173786 CDS Human protein_coding chr17:40125646 chr17:40125647 nonsynonymous SNV 0.639 3 22 hm5C_associated_SNPs_119630 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr17:40125637-40125673
64251 chr1 2491372 2491372 1 + C T HNSC 2491371 + 2491351 2491391 41 GGGGACCACTGCGCCGCGTGCCGCGCTTACGCCACCTCCAG GGGGACCACTGCGCCGCGTGCTGCGCTTACGCCACCTCCAG < 41bp 0.529918512332471 0.749983578892976 0.23683494 0.21376702 prediction 0.44013013312101 Functional Gain - TNFRSF14 ENSG00000157873 CDS Human protein_coding chr1:2491371 chr1:2491372 nonsynonymous SNV 0.005 2 22 hm5C_associated_SNPs_119632 0 0 4 GRWD1 POSTAR2 ENCODE chr1:2491322-2491407
64251 chrX 47045000 47045000 1 + C T BLCA 47044999 + 47044979 47045019 41 CCCAGCAAAGAGGCGCTCATCCGGCACCAGCAGCTCTCAGG CCCAGCAAAGAGGCGCTCATCTGGCACCAGCAGCTCTCAGG < 41bp 0.564340987854281 0.784402792711187 0.38520238 0.25269902 prediction 0.440123609713812 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47044999 chrX:47045000 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_119633 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:47044980-47045000
64251 chr2 174233041 174233041 1 + A G rs1047885 174233038 + 174233018 174233058 41 TAAGTGGTGCGTCCAGCTTACACAATCATAATTCAAAGGTT TAAGTGGTGCGTCCAGCTTACACGATCATAATTCAAAGGTT < 41bp 0.495363328285072 0.720061616731612 0.038776577 0.10880625 prediction 0.440123233463224 Functional Gain - CDCA7 ENSG00000144354 UTR3 Human protein_coding chr2:174233038 chr2:174233041 . . 0 24 hm5C_associated_SNPs_119634 0 1 21 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:174233030-174233051
64251 chr3 120321237 120321237 1 + C A rs139736266 120321233 + 120321213 120321253 41 TGTTAAAAACTATTAACACCCTAACAACACAGAAGCAGACG TGTTAAAAACTATTAACACCCTAAAAACACAGAAGCAGACG < 41bp 0.405910223865158 0.720061249202707 0.0608685 0.06970379 prediction 0.440122498405415 Functional Gain - NDUFB4 ENSG00000065518 UTR3 Human protein_coding chr3:120321233 chr3:120321237 . . 0 25 hm5C_associated_SNPs_119635 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:120321126-120321239
64251 chr1 161681140 161681140 1 + C A COAD 161681136 + 161681116 161681156 41 AGCTCTGGGTCCCCCCGGGCCTAACAGGGAATTCTCCATCA AGCTCTGGGTCCCCCCGGGCCTAAAAGGGAATTCTCCATCA < 41bp 0.356115189911852 0.720058621711963 0.05490893 0.077607036 prediction 0.440117243423925 Functional Gain - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681136 chr1:161681140 nonsynonymous SNV 0.254 0 25 hm5C_associated_SNPs_119636 0 0 1 SND1 POSTAR2 ENCODE chr1:161681001-161681146
64251 chr10 103921942 103921942 1 + T C STAD 103921940 + 103921920 103921960 41 CCAAAGGCAAGTCCTTTCGGCATGAGAAAACCAAGAAGAAG CCAAAGGCAAGTCCTTTCGGCACGAGAAAACCAAGAAGAAG < 41bp 0.450019575959817 0.720055722439772 0.40909073 0.50167084 prediction 0.440111444879544 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103921940 chr10:103921942 synonymous SNV . 0 23 hm5C_associated_SNPs_119637 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr10:103921916-103921943
64251 chr20 31606532 31606532 1 + C T SKCM 31606531 + 31606511 31606551 41 GCATGTGGGTACCGAGGGCTCCATGGCCACCGTGGGCCTCT GCATGTGGGTACCGAGGGCTCTATGGCCACCGTGGGCCTCT < 41bp 0.483584710290635 0.720055463072029 0.21426189 0.34627423 prediction 0.440110926144058 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31606531 chr20:31606532 synonymous SNV . 0 22 hm5C_associated_SNPs_119638 0 0 1 RPS3 POSTAR2 ENCODE chr20:31606509-31606547
64251 chr11 66136997 66136997 1 - G A SKCM 66136998 - 66136978 66137018 41 CTCCCCACCTGGCAGTACTTCCAGGCGCGACTGGCCGGGGC CTCCCCACCTGGCAGTACTTCTAGGCGCGACTGGCCGGGGC < 41bp 0.563288570397467 0.783343657080678 0.9343983 0.8893889 prediction 0.440110173366422 Functional Gain - SLC29A2 ENSG00000174669 CDS Human protein_coding chr11:66136998 chr11:66136997 stopgain 0.884 0 22 hm5C_associated_SNPs_119639 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:66136996-66136997
64251 chr4 170613350 170613350 1 + C A STAD 170613346 + 170613326 170613366 41 TTAAAACCATCACATTAGTCCTGGCTGTGGCATCAGGTTTG TTAAAACCATCACATTAGTCCTGGATGTGGCATCAGGTTTG < 41bp 0.307332086070841 0.720047597776749 0.11251384 0.15107802 prediction 0.440095195553498 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170613346 chr4:170613350 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_119642 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:170613328-170613354
64251 chr3 52723158 52723158 1 + T G STAD 52723156 + 52723136 52723176 41 ATCCTCTTGGTTGCAGATGTCCTCAGGTAGAAGAGGCCATT ATCCTCTTGGTTGCAGATGTCCGCAGGTAGAAGAGGCCATT < 41bp 0.374075670183925 0.720045016622592 0.036810845 0.14187577 prediction 0.440090033245185 Functional Gain - GNL3 ENSG00000163938 CDS Human protein_coding chr3:52723156 chr3:52723158 synonymous SNV . 0 23 hm5C_associated_SNPs_119644 0 0 27 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:52723146-52723170
64251 chr3 107447683 107447683 1 + C A LUAD 107447682 + 107447662 107447702 41 CACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATC CACAAACAAGCCTGTGAAATCACCAACACCCACTGTCAATC < 41bp 0.468737859844706 0.720043354299193 0.17912641 0.2522447 prediction 0.440086708598386 Functional Gain - BBX ENSG00000114439 CDS Human protein_coding chr3:107447682 chr3:107447683 synonymous SNV . 0 22 hm5C_associated_SNPs_119645 0 0 2 CPSF4 POSTAR2 GSE37401,GSM917667 chr3:107447664-107447693
64251 chr10 35500663 35500663 1 + C G BRCA 35500662 + 35500642 35500682 41 CGAGTTGCAGTGCTGGAAGTCCAGAACAAGAAGCTTATAGA CGAGTTGCAGTGCTGGAAGTCGAGAACAAGAAGCTTATAGA < 41bp 0.582770731238518 0.802813417342544 0.46321017 0.43537524 prediction 0.440085372208051 Functional Gain - CREM ENSG00000095794 CDS Human protein_coding chr10:35500662 chr10:35500663 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_119646 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:35500650-35500688
64251 chr16 31089074 31089074 1 + C T COAD 31089073 + 31089053 31089093 41 TGTGGTCGTGCTTACCGCCACCGGGGGAGCCTGGTGAACCA TGTGGTCGTGCTTACCGCCACTGGGGGAGCCTGGTGAACCA < 41bp 0.553315609529637 0.773357406351183 0.6956611 0.29721236 prediction 0.440083593643091 Functional Gain - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089073 chr16:31089074 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_119647 0 0 3 DDX6 POSTAR2 ENCODE chr16:31089061-31089108
64251 chr4 141445408 141445408 1 + T A rs532004534 141445404 + 141445384 141445424 41 TGGGGAAACCGAGGCAGCTCCTGCTCCCCCTAGTTCTTCCG TGGGGAAACCGAGGCAGCTCCTGCACCCCCTAGTTCTTCCG < 41bp 0.603408577275213 0.82344149035221 0.113207966 0.17659831 prediction 0.440065826153994 Functional Gain - ELMOD2 ENSG00000179387 UTR5 Human protein_coding chr4:141445404 chr4:141445408 . . 0 25 hm5C_associated_SNPs_119652 0 0 3 DDX3X POSTAR2 ENCODE chr4:141445317-141445420
64251 chr3 141457302 141457302 1 + T C UCEC 141457300 + 141457280 141457320 41 AAGAAGTGGAACGCGGTGGCCATGTGGAGCTGGGACGTGGA AAGAAGTGGAACGCGGTGGCCACGTGGAGCTGGGACGTGGA < 41bp 0.564642323831808 0.784674665125292 0.6735793 0.7754473 prediction 0.440064682586968 Functional Gain - RNF7 ENSG00000114125 CDS Human protein_coding chr3:141457300 chr3:141457302 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_119653 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:141457268-141457315
64251 chr20 61733262 61733262 1 + C A rs6122371 61733261 + 61733241 61733281 41 TGTGTGCACGTGAGTTAGAGCCTGAGTGTCCCCTGCGTGGG TGTGTGCACGTGAGTTAGAGCATGAGTGTCCCCTGCGTGGG < 41bp 0.5743466779556 0.794374410833174 0.2068694 0.3239167 prediction 0.440055465755148 Functional Gain - HAR1A ENSG00000231133 ncRNA_intronic Human lincRNA chr20:61733261 chr20:61733262 . . 0 22 hm5C_associated_SNPs_119656 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr20:61733236-61733275
64251 chr10 70856987 70856987 1 + C T UCEC 70856986 + 70856966 70857006 41 GTCTGAGGACTGACCTTTTTCCGTAAGTGGACTTTTCTCTA GTCTGAGGACTGACCTTTTTCTGTAAGTGGACTTTTCTCTA < 41bp 0.524068838428566 0.744096457657182 0.18336657 0.06782636 prediction 0.440055238457232 Functional Gain - SRGN ENSG00000122862 CDS Human protein_coding chr10:70856986 chr10:70856987 nonsynonymous SNV 0.155 0 22 hm5C_associated_SNPs_119657 0 0 4 LIN28B POSTAR2 ENCODE chr10:70856976-70856987
64251 chr20 48558183 48558183 1 + C T OV 48558182 + 48558162 48558202 41 AGCGCTCTGGCACCTGGCGTCCGAGCCGTGGAGCTCGAGCG AGCGCTCTGGCACCTGGCGTCTGAGCCGTGGAGCTCGAGCG < 41bp 0.581212220179815 0.801233299912693 0.64816415 0.4628151 prediction 0.440042159465756 Functional Gain - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48558182 chr20:48558183 stopgain 0.999 1 22 hm5C_associated_SNPs_119660 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr20:48558137-48558183
64251 chr1 93300465 93300465 1 + C T LUAD 93300464 + 93300444 93300484 41 TGTACTGGCCTGCTGCTGGCCCGCAGGGTATGTACAAGATG TGTACTGGCCTGCTGCTGGCCTGCAGGGTATGTACAAGATG < 41bp 0.585331625805556 0.805341626310632 0.0398148 0.064792365 prediction 0.440020001010153 Functional Gain - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93300464 chr1:93300465 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_119661 0 0 4 AGGF1 POSTAR2 ENCODE chr1:93300426-93300470
64251 chr13 37581180 37581180 1 + A G rs202038750 37581177 + 37581157 37581197 41 GGAAACATTTTGGATGCCTGCACATTTGCTTTGCTAGCGGC GGAAACATTTTGGATGCCTGCACGTTTGCTTTGCTAGCGGC < 41bp 0.482687996900383 0.720008823546956 0.04654035 0.07962832 prediction 0.440017647093911 Functional Gain - EXOSC8 ENSG00000120699 CDS Human protein_coding chr13:37581177 chr13:37581180 synonymous SNV . 0 24 hm5C_associated_SNPs_119663 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr13:37581158-37581198
64251 chr19 13058786 13058786 1 + T C UCEC 13058784 + 13058764 13058804 41 GTCCCTATCAGGGACTATCGCATCGATGAGAAGAACTTTGT GTCCCTATCAGGGACTATCGCACCGATGAGAAGAACTTTGT < 41bp 0.442681427562068 0.720003001212791 0.8127514 0.86195564 prediction 0.440006002425582 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13058784 chr19:13058786 nonsynonymous SNV 0.904 4 23 hm5C_associated_SNPs_119665 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:13058674-13058806
64251 chr1 118483460 118483460 1 + C T rs113562447 118483459 + 118483439 118483479 41 TTATAAAACAGATTGAAGACCCGGAAGAACCAGACCCCAAG TTATAAAACAGATTGAAGACCTGGAAGAACCAGACCCCAAG < 41bp 0.541581744419216 0.761575578566517 0.4222942 0.13134381 prediction 0.439987668294603 Functional Gain - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118483459 chr1:118483460 nonsynonymous SNV 0.328 0 22 hm5C_associated_SNPs_119672 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:118483447-118483476
64251 chr9 130422360 130422360 1 + C T GBM 130422359 + 130422339 130422379 41 GACCCGCCGACTGCTAAATACCGGGCTGCACACGTCTTCTT GACCCGCCGACTGCTAAATACTGGGCTGCACACGTCTTCTT < 41bp 0.595804862760825 0.815794123589732 0.87821174 0.77947766 prediction 0.439978521657813 Functional Gain - STXBP1 ENSG00000136854 CDS Human protein_coding chr9:130422359 chr9:130422360 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_119675 0 0 1 YBX3 POSTAR2 ENCODE chr9:130422307-130422387
64251 chr5 133473769 133473769 1 + C A LIHC 133473768 + 133473748 133473788 41 AGCACAAGGCCAATCAGCCCCCCCACGGTGTCCCCCAACTC AGCACAAGGCCAATCAGCCCCACCACGGTGTCCCCCAACTC < 41bp 0.474248828262453 0.719985169420018 0.043864757 0.036872715 prediction 0.439970338840035 Functional Gain - TCF7 ENSG00000081059 CDS Human protein_coding chr5:133473768 chr5:133473769 nonsynonymous SNV 0.116 2 22 hm5C_associated_SNPs_119676 0 0 3 IGF2BP1 POSTAR2 ENCODE chr5:133473749-133473796
64251 chr17 7579317 7579317 1 - A C COAD 7579319 - 7579299 7579339 41 TGGGACAGCCAAGTCTGTGACTTGCACGGTCAGTTGCCCTG TGGGACAGCCAAGTCTGTGACTGGCACGGTCAGTTGCCCTG < 41bp 0.404475682532742 0.719982315864623 0.1779784 0.3388906 prediction 0.439964631729245 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7579319 chr17:7579317 nonsynonymous SNV 0.893 4 23 hm5C_associated_SNPs_119677 1 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:7579300-7579320
64251 chr5 133997109 133997109 1 + C A STAD 133997105 + 133997085 133997125 41 GCTTTCTTCCTGAAGCCAACCTGCCACCACCTTTGAATTGG GCTTTCTTCCTGAAGCCAACCTGCAACCACCTTTGAATTGG < 41bp 0.288566890626086 0.719982037522627 0.031381488 0.071685135 prediction 0.439964075045253 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:133997105 chr5:133997109 nonsynonymous SNV 0.305 1 25 hm5C_associated_SNPs_119678 0 0 2 IGF2BP1 POSTAR2 ENCODE chr5:133997092-133997224
64251 chr10 75523716 75523716 1 + C T GBM 75523715 + 75523695 75523735 41 CCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCTGCCCCCA CCCTGGCAGCAGTCATCAAACTGCTGGCAAGGCTGCCCCCA < 41bp 0.589919509781594 0.80988862701072 0.6624638 0.5066868 prediction 0.439938234458252 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75523715 chr10:75523716 nonsynonymous SNV 0.606 4 22 hm5C_associated_SNPs_119682 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:75523691-75523717
64251 chr16 1550689 1550689 1 + C T COAD 1550688 + 1550668 1550708 41 ATCCACCCCGAGGGGCCTCCCCTGAAATTCCAGGTGAGCGG ATCCACCCCGAGGGGCCTCCCTTGAAATTCCAGGTGAGCGG < 41bp 0.576589027885483 0.796553355895194 0.21902469 0.1795106 prediction 0.439928656019421 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1550688 chr16:1550689 synonymous SNV . 0 22 hm5C_associated_SNPs_119685 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1550660-1550693
64251 chr14 23239068 23239068 1 + C T COAD 23239067 + 23239047 23239087 41 CAGCGAGAGGCAGCCAGGATCCACAATCACTTGCCAGAGAT CAGCGAGAGGCAGCCAGGATCTACAATCACTTGCCAGAGAT < 41bp 0.623985639760678 0.843934335746906 0.10562745 0.90562785 prediction 0.439897391972455 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23239067 chr14:23239068 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_119689 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr14:23239064-23239083
64251 chr2 32339750 32339750 1 + T C CESC 32339747 + 32339727 32339767 41 AGAAAAGACCCCTTAACACACACTAGTAATTCACTGCCTCG AGAAAAGACCCCTTAACACACACCAGTAATTCACTGCCTCG < 41bp 0.500919422348022 0.720866621733607 0.06728706 0.05729705 prediction 0.439894398771169 Functional Gain - SPAST ENSG00000021574 CDS Human protein_coding chr2:32339747 chr2:32339750 synonymous SNV . 0 24 hm5C_associated_SNPs_119690 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:32339733-32339752
64251 chr17 7350229 7350229 1 + C T STAD 7350228 + 7350208 7350248 41 GCTCCGCATCACGGCGGAATCCGTGTGGCTCCCTGACGTGG GCTCCGCATCACGGCGGAATCTGTGTGGCTCCCTGACGTGG < 41bp 0.57595814573707 0.795902398960002 0.6259873 0.22254053 prediction 0.439888506445865 Functional Gain - CHRNB1 ENSG00000170175 CDS Human protein_coding chr17:7350228 chr17:7350229 synonymous SNV . 0 22 hm5C_associated_SNPs_119691 0 0 1 PPIG POSTAR2 ENCODE chr17:7350151-7350253
64251 chr11 43908189 43908189 1 + C T SKCM 43908188 + 43908168 43908208 41 GTATGAAATCAGCCTGTCACCCACAGGTGTATCTAGGTAAG GTATGAAATCAGCCTGTCACCTACAGGTGTATCTAGGTAAG < 41bp 0.463051158101089 0.719942581439128 0.01742497 0.025525331 prediction 0.439885162878255 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43908188 chr11:43908189 synonymous SNV . 0 22 hm5C_associated_SNPs_119694 0 0 6 EFTUD2 POSTAR2 ENCODE chr11:43908147-43908198
64251 chr3 50683147 50683147 1 + A G UCEC 50683144 + 50683124 50683164 41 TCCCTCTGCCCTGGCAGCCCCTGAGGTCCTGGGTCCAGAGA TCCCTCTGCCCTGGCAGCCCCTGGGGTCCTGGGTCCAGAGA < 41bp 0.587192688061758 0.807131903850853 0.3062095 0.7923107 prediction 0.43987843157819 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50683144 chr3:50683147 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_119696 0 0 1 SF3B4 POSTAR2 ENCODE chr3:50683074-50683147
64251 chr19 35775705 35775705 1 + C G LUSC 35775701 + 35775681 35775721 41 TGCTTTCACAGACGGGACAACTTGCAGAGCTGCAACCCCAG TGCTTTCACAGACGGGACAACTTGGAGAGCTGCAACCCCAG < 41bp 0.420820973380386 0.71992644789818 0.20406386 0.45082214 prediction 0.439852895796361 Functional Gain - HAMP ENSG00000105697 CDS Human protein_coding chr19:35775701 chr19:35775705 nonsynonymous SNV 0.002 2 25 hm5C_associated_SNPs_119698 0 0 1 PRPF8 POSTAR2 ENCODE chr19:35775650-35775794
64251 chr1 2334863 2334863 1 + C G rs115090288 2334862 + 2334842 2334882 41 CAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAGG CAAGGGCGAGTGGCCGGTCCCGGCTGTGCCAGGTGGGCAGG < 41bp 0.654063007661504 0.87397551925813 0.09068081 0.85660315 prediction 0.439825023193252 Functional Gain - RER1 ENSG00000157916 UTR3 Human protein_coding chr1:2334862 chr1:2334863 . . 0 22 hm5C_associated_SNPs_119702 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:2334841-2334864
64251 chr1 238090463 238090463 1 + C T SKCM 238090462 + 238090442 238090482 41 CTGATCGAGGCCTGCCCGAACCCCAAGGCCAACAGAGAGAA CTGATCGAGGCCTGCCCGAACTCCAAGGCCAACAGAGAGAA < 41bp 0.600902697223592 0.820814473102868 0.12738892 0.9179572 prediction 0.439823551758552 Functional Gain - LOC100130331 ENSG00000237250;ENSG00000243781 ncRNA_exonic Human other chr1:238090462 chr1:238090463 . . 0 22 hm5C_associated_SNPs_119704 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:238090460-238090480
64251 chr9 26978259 26978259 1 + A G rs11555693 26978256 + 26978236 26978276 41 GACTGGAATGAAAACTGGGACGAAAGGTACCTATTTTAAGA GACTGGAATGAAAACTGGGACGAGAGGTACCTATTTTAAGA < 41bp 0.505778371055468 0.725686481046937 0.06486407 0.56120175 prediction 0.439816219982937 Functional Gain - IFT74 ENSG00000096872 CDS Human protein_coding chr9:26978256 chr9:26978259 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_119706 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:26978222-26978260
64251 chr1 229433272 229433272 1 + C T OV 229433271 + 229433251 229433291 41 ACTAATTGGTTAACAGATGCCCGAATGCTAGCGAGCCAGAA ACTAATTGGTTAACAGATGCCTGAATGCTAGCGAGCCAGAA < 41bp 0.596920545816917 0.816828606037699 0.14904532 0.10829428 prediction 0.439816120441564 Functional Gain - RAB4A ENSG00000168118 CDS Human protein_coding chr1:229433271 chr1:229433272 stopgain 0.999 1 22 hm5C_associated_SNPs_119707 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:229433242-229433289
64251 chr16 31718407 31718407 1 + C A rs565961747 31718406 + 31718386 31718426 41 CGGGAGAGAAGTGAGGGAAGCCGGCAGTCCCAGCCCTGTCA CGGGAGAGAAGTGAGGGAAGCAGGCAGTCCCAGCCCTGTCA < 41bp 0.591573994375835 0.811475052953949 0.9200858 0.9207978 prediction 0.439802117156229 Functional Gain - CLUHP3 ENSG00000131797 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr16:31718406 chr16:31718407 . . 0 22 hm5C_associated_SNPs_119713 0 0 7 DDX55 POSTAR2 ENCODE chr16:31718381-31718438
64251 chr9 116994128 116994128 1 + C T GBM 116994127 + 116994107 116994147 41 GATGGGCAGCGTGGGGGAGCCCGGACTGAAAGGTGATAAGG GATGGGCAGCGTGGGGGAGCCTGGACTGAAAGGTGATAAGG < 41bp 0.476793863701752 0.719895760139654 0.89021444 0.90620244 prediction 0.439791520279308 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116994127 chr9:116994128 synonymous SNV . 0 22 hm5C_associated_SNPs_119715 0 0 12 BUD13 POSTAR2 ENCODE chr9:116994124-116994141
64251 chr17 2278880 2278880 1 + C T GBM 2278879 + 2278859 2278899 41 AGGAAGCAGGACCCGGGACTCCGGGCACCGCCGTGGTGGAG AGGAAGCAGGACCCGGGACTCTGGGCACCGCCGTGGTGGAG < 41bp 0.55714651357957 0.777038914532686 0.90128285 0.795727 prediction 0.439784801906232 Functional Gain - SGSM2 ENSG00000141258 CDS Human protein_coding chr17:2278879 chr17:2278880 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_119717 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:2278850-2278896
64251 chr9 135919198 135919198 1 + C T STAD 135919197 + 135919177 135919217 41 TATGACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTT TATGACAAGGTGCTCATGCTCTGGCCCGAGAAGGAGGCCTT < 41bp 0.471579344666602 0.719888416061226 0.8917267 0.49931684 prediction 0.439776832122451 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919197 chr9:135919198 nonsynonymous SNV 0.355 4 22 hm5C_associated_SNPs_119720 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr5 145838623 145838623 1 + C T PAAD 145838622 + 145838602 145838642 41 GGCCCAGGCACAAGCTCAGGCCCAGGCTCAGGCTCAGGCCC GGCCCAGGCACAAGCTCAGGCTCAGGCTCAGGCTCAGGCCC < 41bp 0.564071730525845 0.783953528130447 0.16173023 0.15594155 prediction 0.439763595209204 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838622 chr5:145838623 synonymous SNV . 0 22 hm5C_associated_SNPs_119722 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:145838623-145838624
64251 chr16 84693494 84693494 1 + C A UCEC 84693490 + 84693470 84693510 41 AGAGACGTACAGTCCCAAGACTGACTCCTGGTCCTATGTGG AGAGACGTACAGTCCCAAGACTGAATCCTGGTCCTATGTGG < 41bp 0.293981586527209 0.719881112180313 0.11974466 0.2670641 prediction 0.439762224360627 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84693490 chr16:84693494 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_119723 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:84693479-84693500
64251 chr8 42262979 42262979 1 + A G rs147177887 42262976 + 42262956 42262996 41 CTTGGGATTTGAACTGGAAGCTTAATGTGGTTTGAGGAAAG CTTGGGATTTGAACTGGAAGCTTGATGTGGTTTGAGGAAAG < 41bp 0.529931127834741 0.749801351865799 0.21137223 0.12551284 prediction 0.439740448062115 Functional Gain - VDAC3 ENSG00000078668 CDS Human protein_coding chr8:42262976 chr8:42262979 synonymous SNV . 0 24 hm5C_associated_SNPs_119728 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:42262907-42262982
64251 chr3 51979588 51979588 1 + C A rs201530765 51979584 + 51979564 51979604 41 GAAGACGGTGGAGGAGGTGCCACACCCCCTGGACCGAGACT GAAGACGGTGGAGGAGGTGCCACAACCCCTGGACCGAGACT < 41bp 0.298927627984404 0.719855335348721 0.3111216 0.32702118 prediction 0.439710670697442 Functional Gain - PARP3 ENSG00000041880 CDS Human protein_coding chr3:51979584 chr3:51979588 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_119734 0 0 1 PPIG POSTAR2 ENCODE chr3:51979510-51979642
64251 chr19 34263930 34263930 1 + A G rs138799785 34263927 + 34263907 34263947 41 ACTTCTACTACATGGATTACCTGATGTTCAACTATTCCAAG ACTTCTACTACATGGATTACCTGGTGTTCAACTATTCCAAG < 41bp 0.480797048911156 0.719854847376779 0.14010021 0.1978702 prediction 0.439709694753558 Functional Gain - CHST8 ENSG00000124302 CDS Human protein_coding chr19:34263927 chr19:34263930 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_119735 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:34263921-34263944
64251 chr10 13230898 13230898 1 + T G LUAD 13230895 + 13230875 13230915 41 TTGCAGCGTGACTGTGAGTACTGTCAGTACCATGTCCAGGC TTGCAGCGTGACTGTGAGTACTGGCAGTACCATGTCCAGGC < 41bp 0.321889605911329 0.719854831986878 0.14858913 0.12457013 prediction 0.439709663973755 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13230895 chr10:13230898 nonsynonymous SNV 0.944 5 24 hm5C_associated_SNPs_119736 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:13230878-13230899
64251 chr2 48555727 48555727 1 + C G rs78643364 48555726 + 48555706 48555746 41 GAAGCCATGGATAACAGAACCCACAGATGCAGAGGGCTGAC GAAGCCATGGATAACAGAACCGACAGATGCAGAGGGCTGAC < 41bp 0.458465227609874 0.719851239272527 0.069505095 0.27891487 prediction 0.439702478545053 Functional Gain - FOXN2 ENSG00000170802 UTR5 Human protein_coding chr2:48555726 chr2:48555727 . . 0 22 hm5C_associated_SNPs_119737 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:48555701-48555737
64251 chr2 74076541 74076541 1 + C A COAD 74076540 + 74076520 74076560 41 TGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCC TGGTGCCTGGGCGGCTGTGCCAACAGTTTCTCCAGTTAGCC < 41bp 0.600555870477488 0.820394390292281 0.060693294 0.14228082 prediction 0.439677039629585 Functional Gain - STAMBP ENSG00000124356 CDS Human protein_coding chr2:74076540 chr2:74076541 nonsynonymous SNV 0.812 0 22 hm5C_associated_SNPs_119742 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:74076538-74076587
64251 chr19 15807813 15807813 1 + C T SKCM 15807812 + 15807792 15807832 41 TCCTGCCAGACCACACTGAGCCCCGCAGGAAGCTGGAATTG TCCTGCCAGACCACACTGAGCTCCGCAGGAAGCTGGAATTG < 41bp 0.577130789707668 0.79696757575465 0.24832228 0.18350166 prediction 0.439673572093965 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807812 chr19:15807813 nonsynonymous SNV 0.108 1 22 hm5C_associated_SNPs_119743 0 0 2 GRWD1 POSTAR2 ENCODE chr19:15807774-15807815
64251 chr14 94731258 94731258 1 + T C COAD 94731256 + 94731236 94731276 41 CAACAGAATGATGGAAGGCCCATGAGTGATAAAATGTTTGA CAACAGAATGATGGAAGGCCCACGAGTGATAAAATGTTTGA < 41bp 0.441001598680104 0.719835674510068 0.1432319 0.5604086 prediction 0.439671349020137 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94731256 chr14:94731258 nonsynonymous SNV 0.048 0 23 hm5C_associated_SNPs_119745 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr14:94731235-94731266
64251 chr19 4312042 4312042 1 + C G rs35139245 4312041 + 4312021 4312061 41 ATCCGGCAGACAGAGTACACCCTGACAGGTAAGGGCAGTGT ATCCGGCAGACAGAGTACACCGTGACAGGTAAGGGCAGTGT < 41bp 0.392948329042782 0.719823617176036 0.117841005 0.4480444 prediction 0.439647234352072 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4312041 chr19:4312042 nonsynonymous SNV 0.809 1 22 hm5C_associated_SNPs_119750 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:4312009-4312044
64251 chr2 33585818 33585818 1 + A G SKCM 33585815 + 33585795 33585835 41 GTGGGATGGGGAGATAACTGCGAAATCTTCCCCTGCCCGGT GTGGGATGGGGAGATAACTGCGAGATCTTCCCCTGCCCGGT < 41bp 0.574561951644147 0.794377042131054 0.89514995 0.93115294 prediction 0.439630180973815 Functional Gain - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33585815 chr2:33585818 synonymous SNV . 0 24 hm5C_associated_SNPs_119753 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:33585818-33585842
64251 chr20 2842740 2842740 1 + C T UCEC 2842739 + 2842719 2842759 41 CAAAATTGCCTCAATGGCCCCCGGGGCGCTGCTCCTGGAGG CAAAATTGCCTCAATGGCCCCTGGGGCGCTGCTCCTGGAGG < 41bp 0.479309571633829 0.719814223304484 0.42095962 0.7151197 prediction 0.439628446608969 Functional Gain - VPS16 ENSG00000215305 CDS Human protein_coding chr20:2842739 chr20:2842740 synonymous SNV . 0 22 hm5C_associated_SNPs_119754 0 0 3 PPIG POSTAR2 ENCODE chr20:2842725-2842764
64251 chr6 52546657 52546657 1 + C T UCEC 52546656 + 52546636 52546676 41 TCTTTTTGTTGGATGTTTGGCCGGCTATGGAGCTTACCGTG TCTTTTTGTTGGATGTTTGGCTGGCTATGGAGCTTACCGTG < 41bp 0.532655947551921 0.752457158197459 0.8230587 0.5464679 prediction 0.439602421291075 Functional Gain - TMEM14A ENSG00000096092 CDS Human protein_coding chr6:52546656 chr6:52546657 synonymous SNV . 0 22 hm5C_associated_SNPs_119758 0 0 18 TARDBP POSTAR2 DRA001158,DRS012387 chr6:52546616-52546697
64251 chr16 57416260 57416260 1 + C T SKCM 57416259 + 57416239 57416279 41 TTCCTCAGGGACCAGGCTCCCCCCGACGCCAAAGGCTCAGG TTCCTCAGGGACCAGGCTCCCTCCGACGCCAAAGGCTCAGG < 41bp 0.582998263607588 0.802799021711785 0.067975104 0.10666248 prediction 0.439601516208395 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416259 chr16:57416260 synonymous SNV . 0 22 hm5C_associated_SNPs_119759 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416160-57416273
64251 chr19 4409622 4409622 1 + C T SKCM 4409621 + 4409601 4409641 41 AGTGAGGTGCTGGAATCTTTCCCCGAAGAAGACTCTGTACT AGTGAGGTGCTGGAATCTTTCTCCGAAGAAGACTCTGTACT < 41bp 0.453588855522057 0.719799836745932 0.10185033 0.15961966 prediction 0.439599673491863 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409621 chr19:4409622 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_119760 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:4409571-4409657
64251 chr9 32450092 32450092 1 + C T UCEC 32450091 + 32450071 32450111 41 GGCATCCTCAACTACATGATCCGCAAGATGGCCAAGTAGGA GGCATCCTCAACTACATGATCTGCAAGATGGCCAAGTAGGA < 41bp 0.466791069379898 0.719798653476494 0.024940073 0.049385488 prediction 0.439597306952988 Functional Gain - ACO1 ENSG00000122729 CDS Human protein_coding chr9:32450091 chr9:32450092 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119762 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:32450072-32450093
64251 chrX 54578064 54578064 1 + A G LAML 54578061 + 54578041 54578081 41 TTGGATGCTCCAGGCATTGTCCCAGGGCCCAACTCAGAGGT TTGGATGCTCCAGGCATTGTCCCGGGGCCCAACTCAGAGGT < 41bp 0.468369368572212 0.7197922939178 0.46179882 0.89256454 prediction 0.439584587835599 Functional Gain - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54578061 chrX:54578064 synonymous SNV . 0 24 hm5C_associated_SNPs_119763 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:54578041-54578073
64251 chr4 1808029 1808029 1 + C G HNSC 1808028 + 1808008 1808048 41 GCGCCTGAGGCCTTGTTTGACCGAGTCTACACTCACCAGAG GCGCCTGAGGCCTTGTTTGACGGAGTCTACACTCACCAGAG < 41bp 0.398242663136498 0.719789887682603 0.70732594 0.88759744 prediction 0.439579775365207 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808028 chr4:1808029 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_119765 0 0 5 DDX24 POSTAR2 ENCODE chr4:1807999-1808052
64251 chr3 12858846 12858846 1 + C T SKCM 12858845 + 12858825 12858865 41 GCAGGTGTTCCACTCATTGGCCCGGTGTGTGGCAGCCCTCT GCAGGTGTTCCACTCATTGGCTCGGTGTGTGGCAGCCCTCT < 41bp 0.575947377795998 0.79573706899233 0.86722136 0.7706903 prediction 0.439579382392663 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858845 chr3:12858846 synonymous SNV . 0 22 hm5C_associated_SNPs_119766 0 0 1 RBM15 POSTAR2 ENCODE chr3:12858841-12858878
64251 chr6 33371612 33371612 1 + T C LIHC 33371610 + 33371590 33371630 41 ATGCAGAACTAAAACGGTGCCGTGAGAGGACTCAAACGTTG ATGCAGAACTAAAACGGTGCCGCGAGAGGACTCAAACGTTG < 41bp 0.436964919485105 0.719786958634191 0.4254129 0.44236332 prediction 0.439573917268382 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33371610 chr6:33371612 synonymous SNV . 0 23 hm5C_associated_SNPs_119768 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:33371576-33371639
64251 chr1 171753485 171753485 1 + C G ESCA 171753484 + 171753464 171753504 41 GCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGC GCAGGAGCGACAGCAGTATGCGTGGCTGTGCAGCCAGCTGC < 41bp 0.665126647688401 0.884894224244963 0.23133409 0.7508787 prediction 0.439535153113124 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171753484 chr1:171753485 synonymous SNV . 0 22 hm5C_associated_SNPs_119773 0 0 2 FMR1 POSTAR2 ENCODE chr1:171753478-171753525
64251 chr2 234372891 234372891 1 + C A COAD 234372887 + 234372867 234372907 41 CAGCTCAGGAGGCTGGCAGACACCCCGTGGCTCTGCCAGTC CAGCTCAGGAGGCTGGCAGACACCACGTGGCTCTGCCAGTC < 41bp 0.284914620769031 0.719762817722812 0.13873592 0.12865171 prediction 0.439525635445624 Functional Gain - DGKD ENSG00000077044 CDS Human protein_coding chr2:234372887 chr2:234372891 nonsynonymous SNV 0.791 0 25 hm5C_associated_SNPs_119775 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:234372858-234372896
64251 chr19 36124733 36124733 1 + C T LGG 36124732 + 36124712 36124752 41 GCAGGAGGTGCCCCAGCTGGCCCTGCAGTCATTGGGCCCAG GCAGGAGGTGCCCCAGCTGGCTCTGCAGTCATTGGGCCCAG < 41bp 0.571381769662875 0.791140993753476 0.23686317 0.18643221 prediction 0.439518448181202 Functional Gain - RBM42 ENSG00000126254 CDS Human protein_coding chr19:36124732 chr19:36124733 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_119777 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:36124718-36124754
64251 chr9 131115773 131115773 1 + T C LAML 131115771 + 131115751 131115791 41 GTACGTGTCAACGAGGACACCATGGAGCTGATCCGGGGGCC GTACGTGTCAACGAGGACACCACGGAGCTGATCCGGGGGCC < 41bp 0.598709739337446 0.818460505472233 0.16932628 0.4267643 prediction 0.439501532269575 Functional Gain - SLC27A4 ENSG00000167114 CDS Human protein_coding chr9:131115771 chr9:131115773 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_119781 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:131115759-131115780
64251 chr2 208425875 208425875 1 + C A HNSC 208425874 + 208425854 208425894 41 GGACTTAAAAAGACTTTTCTCCGGAACACAGGTGAGTCCTA GGACTTAAAAAGACTTTTCTCAGGAACACAGGTGAGTCCTA < 41bp 0.471027078705096 0.719747582568205 0.5175705 0.907892 prediction 0.43949516513641 Functional Gain - CREB1 ENSG00000118260 CDS Human protein_coding chr2:208425874 chr2:208425875 synonymous SNV . 0 22 hm5C_associated_SNPs_119783 0 0 3 BUD13 POSTAR2 ENCODE chr2:208425804-208425880
64251 chr16 50667285 50667285 1 + C T KIRC 50667284 + 50667264 50667304 41 TCAGAGCTCCAGCAACGGCTCCGGGGCACCCAGGACGGGAG TCAGAGCTCCAGCAACGGCTCTGGGGCACCCAGGACGGGAG < 41bp 0.564658395724645 0.784405439843207 0.7665671 0.39871812 prediction 0.439494088237123 Functional Gain - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50667284 chr16:50667285 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_119784 0 0 2 GRWD1 POSTAR2 ENCODE chr16:50667221-50667295
64251 chr8 29952946 29952946 1 + C A rs143899166 29952945 + 29952925 29952965 41 CACTTCCGGGTGTTGTCTGGCCGCCGTAGCGCGTCTTGGGT CACTTCCGGGTGTTGTCTGGCAGCCGTAGCGCGTCTTGGGT < 41bp 0.487200086318817 0.719734525692748 0.57766294 0.8185332 prediction 0.439469051385497 Functional Gain - LEPROTL1 ENSG00000104660 UTR5 Human protein_coding chr8:29952945 chr8:29952946 . . 0 22 hm5C_associated_SNPs_119794 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819210 chr8:29952940-29952980
64251 chr14 70477552 70477552 1 + C A LUAD 70477551 + 70477531 70477571 41 CCCGTGAGGGTATTGTCATCCCTGAATGTGCCCCTGGGGGA CCCGTGAGGGTATTGTCATCCATGAATGTGCCCCTGGGGGA < 41bp 0.610974358656849 0.830706930673534 0.06286475 0.13954124 prediction 0.439465144033371 Functional Gain - SMOC1 ENSG00000198732 CDS Human protein_coding chr14:70477551 chr14:70477552 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_119796 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:70477540-70477560
64251 chr1 63269499 63269499 1 + C G BLCA 63269498 + 63269478 63269518 41 TGAAGTTGACAAGCTAAAAACCAAATTTATATCTGCTTGGA TGAAGTTGACAAGCTAAAAACGAAATTTATATCTGCTTGGA < 41bp 0.427769375303546 0.719721697430515 0.26850033 0.4698767 prediction 0.43944339486103 Functional Gain - ATG4C ENSG00000125703 CDS Human protein_coding chr1:63269498 chr1:63269499 synonymous SNV . 0 22 hm5C_associated_SNPs_119803 0 0 7 NOP58 POSTAR2 GSE43666,GSM1067861 chr1:63269464-63269509
64251 chr3 148871405 148871405 1 + C T SARC 148871404 + 148871384 148871424 41 AAGCAGAACCTGAAGCCATTCCAGAGAGAAGACAGTCACCC AAGCAGAACCTGAAGCCATTCTAGAGAGAAGACAGTCACCC < 41bp 0.614201446325486 0.833920502392501 0.2092075 0.08340642 prediction 0.439438112134031 Functional Gain - HPS3 ENSG00000163755 CDS Human protein_coding chr3:148871404 chr3:148871405 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_119807 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:148871381-148871408
64251 chr16 23847559 23847559 1 + C A LUAD 23847558 + 23847538 23847578 41 GGAGAGCACCGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGC GGAGAGCACCGTGCGCTTCGCACGCAAAGGCGCCCTCCGGC < 41bp 0.484053027309318 0.719714420715318 0.13078913 0.263463 prediction 0.439428841430636 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:23847558 chr16:23847559 synonymous SNV . 0 22 hm5C_associated_SNPs_119809 0 0 4 FMR1 POSTAR2 ENCODE chr16:23847488-23847600
64251 chr9 138395799 138395799 1 + C T STAD 138395798 + 138395778 138395818 41 CCTCATCACCTACCCTGTACCCGGCAATGACGACTCTCCGC CCTCATCACCTACCCTGTACCTGGCAATGACGACTCTCCGC < 41bp 0.558426794788792 0.778137977126476 0.20655942 0.047680914 prediction 0.439422364675367 Functional Gain - MRPS2 ENSG00000122140 CDS Human protein_coding chr9:138395798 chr9:138395799 synonymous SNV . 0 22 hm5C_associated_SNPs_119812 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138395719-138395836
64251 chr13 88328530 88328530 1 + C T LUAD 88328529 + 88328509 88328549 41 TTTCTGACTACGAGATGAGGCCGCAGACGCCTTTGAGCACC TTTCTGACTACGAGATGAGGCTGCAGACGCCTTTGAGCACC < 41bp 0.575808453112246 0.795500674303328 0.39093208 0.49124938 prediction 0.439384442382164 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328529 chr13:88328530 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_119819 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr13:88328505-88328546
64251 chr17 1782957 1782957 1 + C A rs2230930 1782956 + 1782936 1782976 41 TATCTACTTGATGGACACATCCGGGAAGGTGGTGACTGCTA TATCTACTTGATGGACACATCAGGGAAGGTGGTGACTGCTA < 41bp 0.617444699712347 0.837136104940453 0.30807698 0.7696141 prediction 0.439382810456212 Functional Gain - RPA1 ENSG00000132383 CDS Human protein_coding chr17:1782956 chr17:1782957 synonymous SNV . 0 22 hm5C_associated_SNPs_119820 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1782858-1782964
64251 chr1 26570743 26570743 1 + C T CESC 26570742 + 26570722 26570762 41 CCCTTTCGGAGCCGCTTCAGCCGCTGTTCAAGTGTAGCCGA CCCTTTCGGAGCCGCTTCAGCTGCTGTTCAAGTGTAGCCGA < 41bp 0.466255917217259 0.719689715758803 0.8917115 0.38505685 prediction 0.439379431517606 Functional Gain - CEP85 ENSG00000130695 CDS Human protein_coding chr1:26570742 chr1:26570743 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_119821 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:26570735-26570761
64251 chr19 46026006 46026006 1 + C T rs201980485 46026005 + 46025985 46026025 41 GCCTCAGGGGGGCCCACAGCCCCCAAAGCTGAGAGTGGTCG GCCTCAGGGGGGCCCACAGCCTCCAAAGCTGAGAGTGGTCG < 41bp 0.629272669147692 0.848962125138044 0.20742533 0.9594412 prediction 0.439378911980704 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46026005 chr19:46026006 nonsynonymous SNV 0.119 0 22 hm5C_associated_SNPs_119822 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:46026006-46026007
64251 chr12 124094674 124094674 1 + T C rs138867340 124094672 + 124094652 124094692 41 TCCCGCCTGGAAAACTACTACATGGTAAGCGCCTGGGCTTG TCCCGCCTGGAAAACTACTACACGGTAAGCGCCTGGGCTTG < 41bp 0.616813047133468 0.836499391091961 0.5661942 0.52352005 prediction 0.439372687916985 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124094672 chr12:124094674 nonsynonymous SNV 0.977 1 23 hm5C_associated_SNPs_119825 0 0 5 BUD13 POSTAR2 ENCODE chr12:124094500-124094682
64251 chr12 120884357 120884357 1 + A G LAML 120884354 + 120884334 120884374 41 CCAGGGCTTCACCTCCAAGGCGGATCCTCAGGTAAAGGCCA CCAGGGCTTCACCTCCAAGGCGGGTCCTCAGGTAAAGGCCA < 41bp 0.565155627871674 0.784835248373241 0.72045434 0.8819162 prediction 0.439359241003133 Functional Gain - GATC ENSG00000257218 CDS Human protein_coding chr12:120884354 chr12:120884357 nonsynonymous SNV 0.005 0 24 hm5C_associated_SNPs_119828 0 0 7 DDX3X POSTAR2 ENCODE chr12:120884281-120884365
64251 chr15 40750789 40750789 1 + C T UCEC 40750788 + 40750768 40750808 41 GGGTGTGGAGCCAGGCATGCCCGAGAGCCCAGGTCACCTCA GGGTGTGGAGCCAGGCATGCCTGAGAGCCCAGGTCACCTCA < 41bp 0.482427468183757 0.719676680406212 0.85201216 0.5140514 prediction 0.439353360812424 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40750788 chr15:40750789 synonymous SNV . 0 22 hm5C_associated_SNPs_119829 0 0 1 FXR2 POSTAR2 ENCODE chr15:40750751-40750807
64251 chr11 46338965 46338965 1 + C T rs77924634 46338964 + 46338944 46338984 41 CTCCCTCGTGCCCTGCCTTCCCGAGTTCTCCTCCGGCTCCC CTCCCTCGTGCCCTGCCTTCCTGAGTTCTCCTCCGGCTCCC < 41bp 0.593772521955766 0.813445766193656 0.2568184 0.22035557 prediction 0.439346488475781 Functional Gain - CREB3L1 ENSG00000157613 CDS Human protein_coding chr11:46338964 chr11:46338965 synonymous SNV . 0 22 hm5C_associated_SNPs_119830 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:46338963-46338999
64251 chr2 201757042 201757042 1 + C A rs200336342 201757038 + 201757018 201757058 41 GAGAACAGAGTCGGTATCTACTCTCCTCATACAGCCTATGA GAGAACAGAGTCGGTATCTACTCTACTCATACAGCCTATGA < 41bp 0.299071443227952 0.719669934001192 0.43638736 0.8938559 prediction 0.439339868002384 Functional Gain - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201757038 chr2:201757042 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_119832 0 0 13 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:201757020-201757051
64251 chr3 170151165 170151165 1 + A G rs144763446 170151162 + 170151142 170151182 41 TGGTCTCGAACTCCTGGACTCAAAGTATCCTCCCGCCTCGG TGGTCTCGAACTCCTGGACTCAAGGTATCCTCCCGCCTCGG < 41bp 0.570384126475376 0.790050608543446 0.22999045 0.87584996 prediction 0.43933296413614 Functional Gain - CLDN11 ENSG00000013297 UTR3 Human protein_coding chr3:170151162 chr3:170151165 . . 0 24 hm5C_associated_SNPs_119833 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr3:170151160-170151180
64251 chr4 38665957 38665957 1 + C A rs375470027 38665956 + 38665936 38665976 41 CGCCGCACGCGCGCCCGTCCCCGTCCCCTGCGGCCGCCAAC CGCCGCACGCGCGCCCGTCCCAGTCCCCTGCGGCCGCCAAC < 41bp 0.505798976540977 0.725463646529646 0.18671915 0.3808457 prediction 0.439329339977339 Functional Gain - KLF3-AS1 ENSG00000231160 ncRNA_exonic Human processed_transcript chr4:38665956 chr4:38665957 . . 0 22 hm5C_associated_SNPs_119834 0 0 4 RTCB POSTAR2 GSE38201,GSM936508 chr4:38665948-38665971
64251 chr7 155556590 155556590 1 + C T CESC 155556589 + 155556569 155556609 41 GAAGTGGGACCACAGCCTGCCCGCAAGGTGACGCTGACCAG GAAGTGGGACCACAGCCTGCCTGCAAGGTGACGCTGACCAG < 41bp 0.458313060240732 0.719663670941704 0.089634985 0.2191607 prediction 0.439327341883409 Functional Gain - RBM33 ENSG00000184863 CDS Human protein_coding chr7:155556589 chr7:155556590 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_119836 0 0 3 BUD13 POSTAR2 ENCODE chr7:155556469-155556606
64251 chr6 27778216 27778216 1 + C A BLCA 27778215 + 27778195 27778235 41 CCAAGCGGGTGACTATCATGCCCAAGGACATCCAGCTCGCA CCAAGCGGGTGACTATCATGCACAAGGACATCCAGCTCGCA < 41bp 0.585051483701085 0.804714489324351 0.027200788 0.035470277 prediction 0.439326011246531 Functional Gain - HIST1H3H ENSG00000203813 CDS Human other chr6:27778215 chr6:27778216 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_119837 0 0 30 SRRM4 POSTAR2 GSE57278,GSM1378374 chr6:27778140-27778300
64251 chr14 95030082 95030082 1 + T C LUAD 95030080 + 95030060 95030100 41 AGCATCTCGGCGGCCTACGCCATGCTTTCCCTGGGGGCCTG AGCATCTCGGCGGCCTACGCCACGCTTTCCCTGGGGGCCTG < 41bp 0.44734438125187 0.719659168083846 0.49336192 0.64913946 prediction 0.439318336167692 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030080 chr14:95030082 nonsynonymous SNV 0.929 5 23 hm5C_associated_SNPs_119838 0 0 2 RPS3 POSTAR2 ENCODE chr14:95030079-95030113
64251 chr17 27075086 27075086 1 + C G LUSC 27075082 + 27075062 27075102 41 GTCATTCCCTGCCCTAATCGCTGCCCCATGAAGCTGAGCCG GTCATTCCCTGCCCTAATCGCTGCGCCATGAAGCTGAGCCG < 41bp 0.419093603885216 0.719653281176447 0.121521294 0.29293218 prediction 0.439306562352893 Functional Gain - TRAF4 ENSG00000076604 CDS Human protein_coding chr17:27075082 chr17:27075086 nonsynonymous SNV 0.978 0 25 hm5C_associated_SNPs_119839 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:27075058-27075090
64251 chr18 72999650 72999650 1 + C T LUAD 72999649 + 72999629 72999669 41 ACCTGGGCAAGGTGTCCAAGCCCGTGAGTCCCTCGCTGGAC ACCTGGGCAAGGTGTCCAAGCTCGTGAGTCCCTCGCTGGAC < 41bp 0.470002732105904 0.719650737006191 0.67645717 0.5718533 prediction 0.439301474012382 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999649 chr18:72999650 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_119840 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr18:72999642-72999662
64251 chr5 53814052 53814052 1 + T C rs2548615 53814050 + 53814030 53814070 41 CCGGGGGCTTCGAGCCCCTGCCTGTCGCGCCCCCCGCCTCC CCGGGGGCTTCGAGCCCCTGCCCGTCGCGCCCCCCGCCTCC < 41bp 0.500778336458351 0.720427193325675 0.105469465 0.12169698 prediction 0.439297713734647 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53814050 chr5:53814052 synonymous SNV . 0 23 hm5C_associated_SNPs_119841 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:53814043-53814085
64251 chr14 94712785 94712785 1 + T A LUSC 94712781 + 94712761 94712801 41 AATGGAGAACTCATGAGAAGCTACTTCAGAAATATGCCTGC AATGGAGAACTCATGAGAAGCTACATCAGAAATATGCCTGC < 41bp 0.370135843030508 0.719643584836525 0.20526543 0.26762295 prediction 0.43928716967305 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94712781 chr14:94712785 nonsynonymous SNV 0.819 2 25 hm5C_associated_SNPs_119843 0 0 2 EIF3H POSTAR2 ENCODE chr14:94712693-94712789
64251 chr1 220928449 220928449 1 + C G LUAD 220928445 + 220928425 220928465 41 AGCAAGCAGCCTTCCTCAAACAAACTCCACAACTGCAGGTG AGCAAGCAGCCTTCCTCAAACAAAGTCCACAACTGCAGGTG < 41bp 0.42210069678985 0.719640253688078 0.14916965 0.60961133 prediction 0.439280507376157 Functional Gain - MARC2 ENSG00000117791 CDS Human protein_coding chr1:220928445 chr1:220928449 nonsynonymous SNV 0.006 0 25 hm5C_associated_SNPs_119844 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:220928433-220928458
64251 chr22 45128230 45128230 1 + C T COAD 45128229 + 45128209 45128249 41 GCGCTGGCCCGGGCCCATGCCCGTGTGCCCCCTGCCATCGT GCGCTGGCCCGGGCCCATGCCTGTGTGCCCCCTGCCATCGT < 41bp 0.473447144301011 0.719637696475603 0.110545635 0.029968023 prediction 0.439275392951206 Functional Gain - PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45128229 chr22:45128230 nonsynonymous SNV 0.210 3 22 hm5C_associated_SNPs_119845 0 0 1 SLTM POSTAR2 ENCODE chr22:45128202-45128242
64251 chr17 48741200 48741200 1 + T C rs140303181 48741198 + 48741178 48741218 41 GTGAAGTTTCGTACTGGGATCATGGGTGTCATCTACAGGAA GTGAAGTTTCGTACTGGGATCACGGGTGTCATCTACAGGAA < 41bp 0.45947601115922 0.719631541751885 0.640816 0.7228094 prediction 0.43926308350377 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48741198 chr17:48741200 nonsynonymous SNV 0.346 1 23 hm5C_associated_SNPs_119846 0 0 1 U2AF1 POSTAR2 ENCODE chr17:48741193-48741217
64251 chr5 176085109 176085109 1 + C A rs565552232 176085105 + 176085085 176085125 41 AGTAGCTGGAAGCCATGGGACTGGCGGGAGCCTGTTTGGGG AGTAGCTGGAAGCCATGGGACTGGAGGGAGCCTGTTTGGGG < 41bp 0.704882580020926 0.924513158311059 0.18728873 0.18871868 prediction 0.439261156580267 Functional Gain - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085105 chr5:176085109 . . 0 25 hm5C_associated_SNPs_119847 0 0 6 DDX6 POSTAR2 ENCODE chr5:176085097-176085148
64251 chr4 40058590 40058590 1 + C G rs530088457 40058589 + 40058569 40058609 41 AGGGCTGCGGACCTGCGGCGCCGCGTTGTGCGTTCGACGAC AGGGCTGCGGACCTGCGGCGCGGCGTTGTGCGTTCGACGAC < 41bp 0.628111726910902 0.847739360103522 0.13530374 0.5227243 prediction 0.43925526638524 Functional Gain - LOC344967 ENSG00000205794 ncRNA_exonic Human transcribed_processed_pseudogene chr4:40058589 chr4:40058590 . . 0 22 hm5C_associated_SNPs_119848 0 0 7 DDX3X POSTAR2 ENCODE chr4:40058528-40058607
64251 chr1 156028139 156028139 1 + C T SKCM 156028138 + 156028118 156028158 41 GTGCAGTACCTGGAGGAGCCCCTCACCCAAGTGGCGGCATC GTGCAGTACCTGGAGGAGCCCTTCACCCAAGTGGCGGCATC < 41bp 0.468329916579969 0.719621412671225 0.24792671 0.33614358 prediction 0.439242825342451 Functional Gain - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156028138 chr1:156028139 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_119853 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:156028123-156028148
64251 chr2 176981812 176981812 1 + C T UCEC 176981811 + 176981791 176981831 41 AAGTAGACAGTTGGACAGATCCGAACAGATCTTGTCGAATA AAGTAGACAGTTGGACAGATCTGAACAGATCTTGTCGAATA < 41bp 0.5531090848319 0.772717650651951 0.083599925 0.09426269 prediction 0.439217131640102 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981811 chr2:176981812 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_119856 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:176981671-176981832
64251 chr19 58723003 58723003 1 + C T STAD 58723002 + 58722982 58723022 41 GCTGGGCCCGACACAGAGGACCGAGTACCGCGATGTGATGC GCTGGGCCCGACACAGAGGACTGAGTACCGCGATGTGATGC < 41bp 0.566100583126028 0.785704242216685 0.314489 0.27364466 prediction 0.439207318181315 Functional Gain - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58723002 chr19:58723003 synonymous SNV . 0 22 hm5C_associated_SNPs_119858 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:58722991-58723045
64251 chr6 117862184 117862184 1 + C T LUSC 117862183 + 117862163 117862203 41 CATCCCCTCGGAAGAAACATCCACAGGTAGAGCCGTGATTG CATCCCCTCGGAAGAAACATCTACAGGTAGAGCCGTGATTG < 41bp 0.454298125904836 0.719587400504038 0.06275618 0.17540944 prediction 0.439174801008076 Functional Gain - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117862183 chr6:117862184 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_119863 0 0 2 GRWD1 POSTAR2 ENCODE chr6:117862148-117862195
64251 chr13 26978103 26978103 1 + C T COAD 26978102 + 26978082 26978122 41 CTCCTTTCCAGCGTTCCAATCCACATGCTGCCTATCCCAAC CTCCTTTCCAGCGTTCCAATCTACATGCTGCCTATCCCAAC < 41bp 0.605294107030312 0.824878921794732 0.08528069 0.8687608 prediction 0.43916962952884 Functional Gain - CDK8 ENSG00000132964 CDS Human protein_coding chr13:26978102 chr13:26978103 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_119865 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr13:26978094-26978127
64251 chr6 160234646 160234646 1 + C T SKCM 160234645 + 160234625 160234665 41 GATTGTAGGAGATGAATTTCCCGAGGGTGTCGAATCTTTCG GATTGTAGGAGATGAATTTCCTGAGGGTGTCGAATCTTTCG < 41bp 0.526934666895085 0.746515719150839 0.87416935 0.33453363 prediction 0.439162104511509 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160234645 chr6:160234646 nonsynonymous SNV 0.579 0 22 hm5C_associated_SNPs_119869 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:160234628-160234659
64251 chr14 21161856 21161856 1 + C T UCEC 21161855 + 21161835 21161875 41 TATGATGCCAAACCACAGGGCCGGGATGACAGATACTGTGA TATGATGCCAAACCACAGGGCTGGGATGACAGATACTGTGA < 41bp 0.498929112401874 0.719580261538949 0.08703971 0.06646043 prediction 0.439160523077898 Functional Gain - ANG ENSG00000214274 CDS Human protein_coding chr14:21161855 chr14:21161856 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_119871 0 0 2 DDX3X POSTAR2 ENCODE chr14:21161824-21161861
64251 chr19 54971716 54971716 1 + C G rs545963134 54971715 + 54971695 54971735 41 TCCCCGCTCCTCCCTGGCCCCCGCACAGGTAAGTGAGGGTG TCCCCGCTCCTCCCTGGCCCCGGCACAGGTAAGTGAGGGTG < 41bp 0.430243021145414 0.71956002342431 0.14776918 0.40962854 prediction 0.439120046848621 Functional Gain - LENG8 ENSG00000167615 UTR3 Human protein_coding chr19:54971715 chr19:54971716 . . 0 22 hm5C_associated_SNPs_119880 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:54971694-54971716
64251 chr22 39112854 39112854 1 + C A GBM 39112853 + 39112833 39112873 41 AAGGCAATGTAGTGAACAAGCCTGACAGCCACGGCGGCAGC AAGGCAATGTAGTGAACAAGCATGACAGCCACGGCGGCAGC < 41bp 0.450535547366082 0.719559380117826 0.2556063 0.36398196 prediction 0.439118760235653 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112853 chr22:39112854 nonsynonymous SNV 0.933 4 22 hm5C_associated_SNPs_119881 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr22:39112809-39112862
64251 chr17 18133304 18133304 1 + C T SKCM 18133303 + 18133283 18133323 41 CCAGCGCCCTGGCCTTCGACCCGGAACTTCGCATCATGGCC CCAGCGCCCTGGCCTTCGACCTGGAACTTCGCATCATGGCC < 41bp 0.590665933558428 0.810224784141623 0.3389954 0.2217206 prediction 0.43911770116639 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18133303 chr17:18133304 nonsynonymous SNV 0.313 2 22 hm5C_associated_SNPs_119882 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18133293-18133313
64251 chr1 22839532 22839532 1 + C T BLCA 22839531 + 22839511 22839551 41 GAACCACCTTCGCCTTCACACCGGGGACCGCCCGTTCATGT GAACCACCTTCGCCTTCACACTGGGGACCGCCCGTTCATGT < 41bp 0.464185310361269 0.71955711696691 0.67434824 0.32115775 prediction 0.43911423393382 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22839531 chr1:22839532 synonymous SNV . 0 22 hm5C_associated_SNPs_119883 0 0 4 GRWD1 POSTAR2 ENCODE chr1:22839500-22839612
64251 chr19 58826521 58826521 1 + T G rs11084541 58826517 + 58826497 58826537 41 TATGAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATAT TATGAAGGGCTGTAAAAGCTCAGGGCCCTGTTCCCTAATAT < 41bp 0.5071250414212 0.726674414416059 0.28820795 0.63370025 prediction 0.439098745989718 Functional Gain - ERVK3-1;ZNF8-ERVK3-1 ENSG00000142396 ncRNA_exonic Human protein_coding chr19:58826517 chr19:58826521 . . 0 25 hm5C_associated_SNPs_119888 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:58826457-58826625
64251 chr1 154229595 154229595 1 + C T LUSC 154229594 + 154229574 154229614 41 TTCCTCCAGCACTTTTTCCACCACATCCAGCACAGTCTCTG TTCCTCCAGCACTTTTTCCACTACATCCAGCACAGTCTCTG < 41bp 0.453812261004175 0.719545996675904 0.066999435 0.22907701 prediction 0.439091993351808 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229594 chr1:154229595 synonymous SNV . 0 22 hm5C_associated_SNPs_119891 0 0 23 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:154229560-154229600
64251 chr12 2912358 2912358 1 + A G UCEC 2912355 + 2912335 2912375 41 TCAGGAGACCATCCCACTGACACAGAGATGAAGGAGGAGCA TCAGGAGACCATCCCACTGACACGGAGATGAAGGAGGAGCA < 41bp 0.558407000925608 0.777951615778072 0.16244066 0.15693936 prediction 0.439089229704928 Functional Gain - FKBP4 ENSG00000004478 CDS Human protein_coding chr12:2912355 chr12:2912358 synonymous SNV . 0 24 hm5C_associated_SNPs_119892 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:2912324-2912375
64251 chr2 44396235 44396235 1 + T G rs12712912 44396233 + 44396213 44396253 41 CTAGGGTGGAGAGAAGGCGGCATCGGCGGCGGCGGCGGCGT CTAGGGTGGAGAGAAGGCGGCAGCGGCGGCGGCGGCGGCGT < 41bp 0.669598931535763 0.889127613454818 0.9043665 0.9096361 prediction 0.439057363838109 Functional Gain - PPM1B ENSG00000138032 UTR5 Human protein_coding chr2:44396233 chr2:44396235 . . 0 23 hm5C_associated_SNPs_119896 0 0 7 DDX3X POSTAR2 ENCODE chr2:44396163-44396331
64251 chr19 16436566 16436566 1 + C A rs375247255 16436565 + 16436545 16436585 41 TGGCCCTGGTTTCGGCGCGCCCGGGCCCGGCCTGCATTACG TGGCCCTGGTTTCGGCGCGCCAGGGCCCGGCCTGCATTACG < 41bp 0.590038620248091 0.809553311604891 0.88343006 0.92844856 prediction 0.439029382713601 Functional Gain - KLF2 ENSG00000127528 CDS Human protein_coding chr19:16436565 chr19:16436566 synonymous SNV . 0 22 hm5C_associated_SNPs_119901 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:16436552-16436578
64251 chr2 86438600 86438600 1 + T C rs17438451 86438598 + 86438578 86438618 41 CAGTTATGTGAGCAGTTTCACTTGGAGGTTCACATGGGGTG CAGTTATGTGAGCAGTTTCACTCGGAGGTTCACATGGGGTG < 41bp 0.578498250769793 0.798012060846572 0.105760604 0.0893141 prediction 0.439027620153558 Functional Gain - MRPL35 ENSG00000132313 UTR3 Human protein_coding chr2:86438598 chr2:86438600 . . 0 23 hm5C_associated_SNPs_119902 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:86438580-86438600
64251 chr22 50957827 50957827 1 + A G rs181658132 50957824 + 50957804 50957844 41 TCTGGGGCCGAGTCACCTTGCACAAGGAGGACAGTGGTATG TCTGGGGCCGAGTCACCTTGCACGAGGAGGACAGTGGTATG < 41bp 0.541668811912902 0.761181856112884 0.08559093 0.21236315 prediction 0.439026088399964 Functional Gain - NCAPH2 ENSG00000025770 UTR3 Human protein_coding chr22:50957824 chr22:50957827 . . 0 24 hm5C_associated_SNPs_119904 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:50957760-50957846
64251 chr8 117783975 117783975 1 + C T rs16888728 117783974 + 117783954 117783994 41 TGAAGAAAAAGAAAAAGGCACCGGACACACAATCATCTGCT TGAAGAAAAAGAAAAAGGCACTGGACACACAATCATCTGCT < 41bp 0.526080010305555 0.745591030087007 0.3739723 0.4095001 prediction 0.439022039562903 Functional Gain - UTP23 ENSG00000147679 CDS Human protein_coding chr8:117783974 chr8:117783975 nonsynonymous SNV 0.842 0 22 hm5C_associated_SNPs_119905 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:117783964-117783992
64251 chr8 56866481 56866481 1 + C A HNSC 56866480 + 56866460 56866500 41 ATAAAGATGCCTGGGAGATCCCCCGGGAGTCCATCAAGTTG ATAAAGATGCCTGGGAGATCCACCGGGAGTCCATCAAGTTG < 41bp 0.587414109444093 0.806915269494351 0.13500753 0.18500715 prediction 0.439002320100517 Functional Gain - LYN ENSG00000254087 CDS Human protein_coding chr8:56866480 chr8:56866481 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_119910 0 0 2 LIN28B POSTAR2 ENCODE chr8:56866458-56866523
64251 chr22 40759015 40759015 1 + C T CESC 40759014 + 40758994 40759034 41 TTTGGCCGAGGCATTTCTTACCGCAGATACTATATTGAATA TTTGGCCGAGGCATTTCTTACTGCAGATACTATATTGAATA < 41bp 0.611941682851153 0.83143993986799 0.62757325 0.38809168 prediction 0.438996514033675 Functional Gain - ADSL ENSG00000239900 CDS Human protein_coding chr22:40759014 chr22:40759015 synonymous SNV . 0 22 hm5C_associated_SNPs_119911 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:40758972-40759016
64251 chr11 34988232 34988232 1 + C T STAD 34988231 + 34988211 34988251 41 GAAACAAACGGGCAAGATTACCGAGTCCAGACCAACTCCAG GAAACAAACGGGCAAGATTACTGAGTCCAGACCAACTCCAG < 41bp 0.565859797026308 0.785340348653223 0.58503824 0.379661 prediction 0.43896110325383 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34988231 chr11:34988232 synonymous SNV . 0 22 hm5C_associated_SNPs_119913 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:34988196-34988233
64251 chr8 19687981 19687981 1 + A G COAD 19687978 + 19687958 19687998 41 TCACATTGTAGTCAATAAAGCCGAACTTGCTAACTCCACTG TCACATTGTAGTCAATAAAGCCGGACTTGCTAACTCCACTG < 41bp 0.481673366172753 0.719472860832587 0.13663754 0.40221882 prediction 0.438945721665174 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19687978 chr8:19687981 nonsynonymous SNV 0.259 2 24 hm5C_associated_SNPs_119915 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr8:19687971-19687993
64251 chr11 85956300 85956300 1 + C G LUSC 85956299 + 85956279 85956319 41 AGAGGGAAGTGTCGACTGCGCCGGCGGGAACAGACATGCCT AGAGGGAAGTGTCGACTGCGCGGGCGGGAACAGACATGCCT < 41bp 0.656636831148788 0.876102881210422 0.53384453 0.6252757 prediction 0.438932100123268 Functional Gain - EED ENSG00000074266 CDS Human protein_coding chr11:85956299 chr11:85956300 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_119919 0 0 3 BUD13 POSTAR2 ENCODE chr11:85956292-85956412
64251 chr7 76027019 76027019 1 + A G UCEC 76027016 + 76026996 76027036 41 ATGGCCGCCCCGCAGCCCAGCTGACGACAGACCACAGCGGC ATGGCCGCCCCGCAGCCCAGCTGGCGACAGACCACAGCGGC < 41bp 0.570727947530791 0.790190859841855 0.17071798 0.39378038 prediction 0.438925824622129 Functional Gain - SSC4D ENSG00000146700 CDS Human protein_coding chr7:76027016 chr7:76027019 synonymous SNV . 0 24 hm5C_associated_SNPs_119922 0 0 1 DDX3X POSTAR2 ENCODE chr7:76026931-76027028
64251 chr19 50386990 50386990 1 + C T UCEC 50386989 + 50386969 50387009 41 AACTCACTTCTGCATGGATACCGCAGCCTCATCGGTCAGTG AACTCACTTCTGCATGGATACTGCAGCCTCATCGGTCAGTG < 41bp 0.608409179599807 0.82786981981487 0.26543272 0.39831686 prediction 0.438921280430127 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386989 chr19:50386990 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_119923 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50386967-50387002
64251 chr13 77570129 77570129 1 + T G PRAD 77570126 + 77570106 77570146 41 GAACTTTTCCAACTTGGCAACTGTACATTTCCCCATCTCCG GAACTTTTCCAACTTGGCAACTGGACATTTCCCCATCTCCG < 41bp 0.324420775235007 0.719448498620972 0.04056722 0.08235061 prediction 0.438896997241945 Functional Gain - CLN5 ENSG00000102805 CDS Human protein_coding chr13:77570126 chr13:77570129 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_119926 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr13:77570074-77570148
64251 chr21 47531433 47531433 1 + C T UCEC 47531432 + 47531412 47531452 41 GTGCTCCTGCTCTGGGGAATCCTGGGGGCCATCCAGGCCCA GTGCTCCTGCTCTGGGGAATCTTGGGGGCCATCCAGGCCCA < 41bp 0.563975880770307 0.78342310184313 0.8627935 0.8899865 prediction 0.438894442145646 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47531432 chr21:47531433 synonymous SNV . 0 22 hm5C_associated_SNPs_119927 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr21:47531415-47531435
64251 chr9 74817652 74817652 1 + A G UCS 74817649 + 74817629 74817669 41 TTTGCAGAAGAAGTATATACCAGAGTTGTCGTAAGTATCTT TTTGCAGAAGAAGTATATACCAGGGTTGTCGTAAGTATCTT < 41bp 0.530006269659469 0.749449182564152 0.5063175 0.8921659 prediction 0.438885825809365 Functional Gain - GDA ENSG00000119125 CDS Human protein_coding chr9:74817649 chr9:74817652 synonymous SNV . 0 24 hm5C_associated_SNPs_119931 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr9:74817640-74817660
64251 chr15 41851414 41851414 1 + T A rs148149251 41851410 + 41851390 41851430 41 CCTCCTCCCCGCCCTCCTCCCTCCTCGCTCGCGGGCCGGGC CCTCCTCCCCGCCCTCCTCCCTCCACGCTCGCGGGCCGGGC < 41bp 0.555877554037811 0.775314370371234 0.024076283 0.9305128 prediction 0.438873632666846 Functional Gain - TYRO3 ENSG00000092445 UTR5 Human protein_coding chr15:41851410 chr15:41851414 . . 0 25 hm5C_associated_SNPs_119933 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:41851414-41851415
64251 chr19 30312986 30312986 1 + T C UCEC 30312984 + 30312964 30313004 41 TTGCATATCTAAATGACTTACATGAAGTGCTACTGCCGCAG TTGCATATCTAAATGACTTACACGAAGTGCTACTGCCGCAG < 41bp 0.633854533521344 0.853289864684598 0.17318273 0.15397048 prediction 0.438870662326509 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30312984 chr19:30312986 synonymous SNV . 0 23 hm5C_associated_SNPs_119935 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr19:30312977-30313013
64251 chr16 2564154 2564154 1 + T C COAD 2564152 + 2564132 2564172 41 TATGCTTCGTTTTTCGCCGTCATGGGCGCCTCGGCCGCCAT TATGCTTCGTTTTTCGCCGTCACGGGCGCCTCGGCCGCCAT < 41bp 0.560827295230556 0.780254592514688 0.8640219 0.86079514 prediction 0.438854594568264 Functional Gain - ATP6V0C ENSG00000185883;ENSG00000259784 CDS Human other chr16:2564152 chr16:2564154 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_119937 0 0 32 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2564117-2564181
64251 chr16 27459983 27459983 1 - G T KIRP 27459984 - 27459964 27460004 41 CTCTGCTGGTTCTTGTAGCTCCGTGAGCTGCAGCCTCTTGG CTCTGCTGGTTCTTGTAGCTCAGTGAGCTGCAGCCTCTTGG < 41bp 0.455491510241509 0.719421165222723 0.5011893 0.65405065 prediction 0.438842330445446 Functional Gain - IL21R ENSG00000103522 CDS Human protein_coding chr16:27459984 chr16:27459983 synonymous SNV . 0 22 hm5C_associated_SNPs_119940 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:27459982-27460085
64251 chr4 2930142 2930142 1 + C T COAD 2930141 + 2930121 2930161 41 AGCTGTCGAGGAGGGGGCCGCCGCGGACCCTGGCAGCGATG AGCTGTCGAGGAGGGGGCCGCTGCGGACCCTGGCAGCGATG < 41bp 0.511598111353201 0.731018867064503 0.9179913 0.8873385 prediction 0.438841511422604 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2930141 chr4:2930142 synonymous SNV . 0 22 hm5C_associated_SNPs_119941 0 0 1 RPS3 POSTAR2 ENCODE chr4:2930080-2930161
64251 chr20 61919072 61919072 1 + C T BLCA 61919071 + 61919051 61919091 41 GACGTGCGCGGACACCTCCACCGAGAGGAGGAGCTCGGACA GACGTGCGCGGACACCTCCACTGAGAGGAGGAGCTCGGACA < 41bp 0.487846458045585 0.719412594864607 0.3149322 0.22834548 prediction 0.438825189729213 Functional Gain - ARFGAP1 ENSG00000101199 CDS Human protein_coding chr20:61919071 chr20:61919072 synonymous SNV . 0 22 hm5C_associated_SNPs_119944 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61919051-61919076
64251 chr15 41523559 41523559 1 + C G rs548660281 41523555 + 41523535 41523575 41 CGTCTCTTCTGGCGCCGCTGCTCCCGGAGGAGCTCCCGGCA CGTCTCTTCTGGCGCCGCTGCTCCGGGAGGAGCTCCCGGCA < 41bp 0.545819612145457 0.76522555763968 0.30620694 0.83535635 prediction 0.438811890988446 Functional Gain - CHP1 ENSG00000187446 UTR5 Human protein_coding chr15:41523555 chr15:41523559 . . 0 25 hm5C_associated_SNPs_119947 0 0 8 EIF3B POSTAR2 GSE65004,GSM1585667 chr15:41523501-41523560
64251 chr7 128477266 128477266 1 + C T SKCM 128477265 + 128477245 128477285 41 CAACCAGCCCGTGGAGAACGCCCGGGAGGCCATGCAGCAGG CAACCAGCCCGTGGAGAACGCTCGGGAGGCCATGCAGCAGG < 41bp 0.559206968184752 0.778609732906212 0.52855694 0.24180013 prediction 0.43880552944292 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128477265 chr7:128477266 synonymous SNV . 0 22 hm5C_associated_SNPs_119949 0 0 2 METAP2 POSTAR2 ENCODE chr7:128477260-128477269
64251 chr5 68856122 68856122 1 + A G rs2666589 68856119 + 68856099 68856139 41 GCAGAGGTGGGGCAGGCCGTCTGACTAGCTAGGCGGCTGGG GCAGAGGTGGGGCAGGCCGTCTGGCTAGCTAGGCGGCTGGG < 41bp 0.549440690525738 0.768832007497822 0.24113339 0.6796435 prediction 0.438782633944168 Functional Gain - GTF2H2C;GTF2H2C_2 ENSG00000253203 ncRNA_intronic Human transcribed_unprocessed_pseudogene chr5:68856119 chr5:68856122 . . 0 24 hm5C_associated_SNPs_119953 0 0 1 DDX3X POSTAR2 ENCODE chr5:68856083-68856137
64251 chr1 118495182 118495182 1 + T C LIHC 118495179 + 118495159 118495199 41 CCAGGAAATATGGTGTTTGGCTGTAAGCCCCAGTGGAGACT CCAGGAAATATGGTGTTTGGCTGCAAGCCCCAGTGGAGACT < 41bp 0.522220235927024 0.741608032115659 0.053560257 0.066369206 prediction 0.43877559237727 Functional Gain - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118495179 chr1:118495182 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_119954 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:118495163-118495185
64251 chrX 54950196 54950196 1 + C T UCEC 54950195 + 54950175 54950215 41 AGGACCCGGGGCAAAAGAAACCGAAAGGTGAGATCTCTGAC AGGACCCGGGGCAAAAGAAACTGAAAGGTGAGATCTCTGAC < 41bp 0.476867384624979 0.719382837462056 0.37721732 0.8076043 prediction 0.438765674924112 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54950195 chrX:54950196 stopgain 0.998 0 22 hm5C_associated_SNPs_119955 0 0 1 EIF3H POSTAR2 ENCODE chrX:54950143-54950199
64251 chr2 99061360 99061360 1 + T G rs536225667 99061358 + 99061338 99061378 41 CTGGCTAGGGCTGCGGCGCGCGTGGAGGGTTCGCTGCTGGT CTGGCTAGGGCTGCGGCGCGCGGGGAGGGTTCGCTGCTGGT < 41bp 0.687926861233486 0.907308133303669 0.4544231 0.91304845 prediction 0.438762544140366 Functional Gain - INPP4A ENSG00000040933 UTR5 Human protein_coding chr2:99061358 chr2:99061360 . . 0 23 hm5C_associated_SNPs_119957 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:99061357-99061388
64251 chr6 33411299 33411299 1 + C T rs61421477 33411298 + 33411278 33411318 41 CAAGAGTGAGGACCTCTCTTCCGGGGTCCCCAAGCCCCCTG CAAGAGTGAGGACCTCTCTTCTGGGGTCCCCAAGCCCCCTG < 41bp 0.567241798176197 0.786607332135481 0.959617 0.9425372 prediction 0.438731067918568 Functional Gain - SYNGAP1 ENSG00000197283 CDS Human protein_coding chr6:33411298 chr6:33411299 synonymous SNV . 0 22 hm5C_associated_SNPs_119965 2 0 1 DDX24 POSTAR2 ENCODE chr6:33411280-33411342
64251 chr9 139741099 139741099 1 + C A LUAD 139741095 + 139741075 139741115 41 TCGCGCATCGCGCGTGTCGGCTTCCTGTCGCGCGGCCGCGG TCGCGCATCGCGCGTGTCGGCTTCATGTCGCGCGGCCGCGG < 41bp 0.333990940974204 0.719362314156571 0.107655466 0.123233855 prediction 0.438724628313143 Functional Gain - C9orf172 ENSG00000232434 CDS Human protein_coding chr9:139741095 chr9:139741099 nonsynonymous SNV 0.089 3 25 hm5C_associated_SNPs_119967 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr9:139741081-139741099
64251 chr11 3427857 3427857 1 + C T SKCM 3427856 + 3427836 3427876 41 TTCAAGTGGCAGGAGCAGAACCCGAATCTTTCTGGGGATAG TTCAAGTGGCAGGAGCAGAACTCGAATCTTTCTGGGGATAG < 41bp 0.550000585790673 0.769358958351045 0.2518553 0.7015408 prediction 0.438716745120744 Functional Gain - TSSC2 ENSG00000223756 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr11:3427856 chr11:3427857 . . 0 22 hm5C_associated_SNPs_119970 0 0 1 RBM15 POSTAR2 ENCODE chr11:3427820-3427863
64251 chr16 67576836 67576836 1 + A G STAD 67576833 + 67576813 67576853 41 CCCAGTCTCCAATTCCTACACTCAGGCAGACCCTATGGCCC CCCAGTCTCCAATTCCTACACTCGGGCAGACCCTATGGCCC < 41bp 0.579795498574405 0.799150861221291 0.014058769 0.040875316 prediction 0.43871072529377 Functional Gain - RIPOR1 ENSG00000039523 CDS Human protein_coding chr16:67576833 chr16:67576836 nonsynonymous SNV 0.051 0 24 hm5C_associated_SNPs_119971 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:67576793-67576836
64251 chr1 173744849 173744849 1 + T C PAAD 173744846 + 173744826 173744866 41 ACCCGGAGGAAACACCTAGGCTGTGCAGTATATCAGGACAT ACCCGGAGGAAACACCTAGGCTGCGCAGTATATCAGGACAT < 41bp 0.521163869051425 0.740516607287147 0.051088423 0.03265977 prediction 0.438705476471445 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173744846 chr1:173744849 synonymous SNV . 0 24 hm5C_associated_SNPs_119974 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:173744842-173744859
64251 chr20 18523024 18523024 1 + C A THCA 18523023 + 18523003 18523043 41 TCCAGCACCCAGAGACGCATCCGCGTGACCACCATCGCCCG TCCAGCACCCAGAGACGCATCAGCGTGACCACCATCGCCCG < 41bp 0.615148813559568 0.834501225255497 0.38596222 0.29421443 prediction 0.438704823391858 Functional Gain - SEC23B ENSG00000101310 CDS Human protein_coding chr20:18523023 chr20:18523024 nonsynonymous SNV 0.995 5 22 hm5C_associated_SNPs_119975 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr20:18523019-18523039
64251 chr19 52090014 52090014 1 + C T rs35625154 52090013 + 52089993 52090033 41 GAACTGAGGCTGGATGCTGACCGCACAAAGAAAGATGAGCA GAACTGAGGCTGGATGCTGACTGCACAAAGAAAGATGAGCA < 41bp 0.559174065376324 0.77852597890469 0.10968 0.08971205 prediction 0.438703827056731 Functional Gain - ZNF175 ENSG00000105497 CDS Human protein_coding chr19:52090013 chr19:52090014 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_119976 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:52089988-52090026
64251 chr14 24772330 24772330 1 + C T PAAD 24772329 + 24772309 24772349 41 TGTCTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGTAG TGTCTTGGAAGCTGTATTGGCTCAGGGCCACCCAGGGGTAG < 41bp 0.582508798200483 0.801860201364146 0.3723358 0.15656117 prediction 0.438702806327327 Functional Gain - NOP9 ENSG00000196943 CDS Human protein_coding chr14:24772329 chr14:24772330 synonymous SNV . 0 22 hm5C_associated_SNPs_119977 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:24772321-24772348
64251 chr19 57835090 57835090 1 + A G COAD 57835087 + 57835067 57835107 41 GGATGTGGCTGTGACATTCACCCAGGAGGAGTGGGGACAGT GGATGTGGCTGTGACATTCACCCGGGAGGAGTGGGGACAGT < 41bp 0.478995902916805 0.719351300069766 0.09706169 0.3617583 prediction 0.438702600139533 Functional Gain - ZNF543 ENSG00000178229 CDS Human protein_coding chr19:57835087 chr19:57835090 nonsynonymous SNV 0.668 0 24 hm5C_associated_SNPs_119978 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:57835079-57835102
64251 chr10 116702490 116702490 1 + C T STAD 116702489 + 116702469 116702509 41 GGGACTCTAGACAGCGCAGCCCGAGGAGTTCTGGGTAAGAG GGGACTCTAGACAGCGCAGCCTGAGGAGTTCTGGGTAAGAG < 41bp 0.4772951864942 0.71934364631869 0.34381688 0.16576022 prediction 0.43868729263738 Functional Gain - TRUB1 ENSG00000165832 CDS Human protein_coding chr10:116702489 chr10:116702490 stopgain 0.988 0 22 hm5C_associated_SNPs_119982 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:116702450-116702491
64251 chr19 1086043 1086043 1 + T C rs3761026 1086041 + 1086021 1086061 41 GGACCACAGGTGGCTTCTCTCTTGCCTGCTCCTGTCCCTCC GGACCACAGGTGGCTTCTCTCTCGCCTGCTCCTGTCCCTCC < 41bp 0.535375804593735 0.75471782688196 0.14246517 0.26492542 prediction 0.43868404457645 Functional Gain - ARHGAP45 ENSG00000180448 UTR3 Human protein_coding chr19:1086041 chr19:1086043 . . 0 23 hm5C_associated_SNPs_119984 0 1 2 DDX24 POSTAR2 ENCODE chr19:1086034-1086080
64251 chr14 57863536 57863536 1 + C T STAD 57863535 + 57863515 57863555 41 GATATGCACAAAAAGATGTTCCGCAGAGGTTATATAGCCAT GATATGCACAAAAAGATGTTCTGCAGAGGTTATATAGCCAT < 41bp 0.455761705595771 0.719341416152718 0.19738877 0.16759217 prediction 0.438682832305437 Functional Gain - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57863535 chr14:57863536 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_119985 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr14:57863524-57863560
64251 chr19 36033244 36033244 1 - G A SKCM 36033245 - 36033225 36033265 41 TAGGGGCTCCCGACAGCCCTCCAGGGGATCTGTTTGGGCTC TAGGGGCTCCCGACAGCCCTCTAGGGGATCTGTTTGGGCTC < 41bp 0.548997244464811 0.768336272314247 0.9152942 0.8578913 prediction 0.438678055698872 Functional Gain - GAPDHS ENSG00000105679 CDS Human protein_coding chr19:36033245 chr19:36033244 stopgain 0.743 1 22 hm5C_associated_SNPs_119987 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:36033211-36033244
64251 chr1 203045716 203045716 1 + C G rs183281239 203045715 + 203045695 203045735 41 ACCGTGTGTCCGTTGTAAGTCCGGTGGATGTGGCTGGGGTT ACCGTGTGTCCGTTGTAAGTCGGGTGGATGTGGCTGGGGTT < 41bp 0.408106638812364 0.719330179053119 0.5664231 0.86868334 prediction 0.438660358106237 Functional Gain - PPFIA4 ENSG00000143847 UTR3 Human protein_coding chr1:203045715 chr1:203045716 . . 0 22 hm5C_associated_SNPs_119989 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr1:203045680-203045717
64251 chr1 33945215 33945215 1 + C A OV 33945211 + 33945191 33945231 41 CTATCTTGCCTAGGGAGGTCCAGACCTGGGTGCAGGCACGC CTATCTTGCCTAGGGAGGTCCAGAACTGGGTGCAGGCACGC < 41bp 0.303540354533963 0.719328753840605 0.10571644 0.13693094 prediction 0.43865750768121 Functional Gain - ZSCAN20 ENSG00000121903 CDS Human protein_coding chr1:33945211 chr1:33945215 nonsynonymous SNV 0.953 0 25 hm5C_associated_SNPs_119991 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:33945211-33945230
64251 chr7 148489851 148489851 1 + T C STAD 148489848 + 148489828 148489868 41 TCCAGATGGCTATCCTGCTTCAGTACAACACGGAAGATGCC TCCAGATGGCTATCCTGCTTCAGCACAACACGGAAGATGCC < 41bp 0.501419004596693 0.720721305203351 0.35532057 0.22257003 prediction 0.438604601213315 Functional Gain - CUL1 ENSG00000055130 CDS Human protein_coding chr7:148489848 chr7:148489851 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_120006 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:148489833-148489890
64251 chr19 36430513 36430513 1 + C T SKCM 36430512 + 36430492 36430532 41 CTCGCTGGACCGCCGGGCAGCCGAGCTGCGGCTGGCAGACA CTCGCTGGACCGCCGGGCAGCTGAGCTGCGGCTGGCAGACA < 41bp 0.496566864588919 0.719299364576449 0.3925819 0.43147415 prediction 0.438598729152898 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36430512 chr19:36430513 synonymous SNV . 0 22 hm5C_associated_SNPs_120009 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:36430483-36430521
64251 chr3 50114462 50114462 1 + C T SKCM 50114461 + 50114441 50114481 41 GCTGAAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAGG GCTGAAGGCCGGATGAGGGGCTCCAGTGTTGGAGCCTCAGG < 41bp 0.462481989273528 0.719297758643948 0.13034418 0.89063996 prediction 0.438595517287895 Functional Gain - RBM6 ENSG00000004534 CDS Human protein_coding chr3:50114461 chr3:50114462 nonsynonymous SNV 0.110 0 22 hm5C_associated_SNPs_120012 0 0 19 CSTF2 POSTAR2 GSE40859,GSM1003587 chr3:50114456-50114477
64251 chr11 2325427 2325427 1 + T C rs61744929 2325425 + 2325405 2325445 41 GTGAGGGAGGCCCAGGGCCTCATGGCAGGGGTGAGTTCATT GTGAGGGAGGCCCAGGGCCTCACGGCAGGGGTGAGTTCATT < 41bp 0.500576897630668 0.71985338089265 0.62606496 0.529462 prediction 0.438552966523963 Functional Gain - TSPAN32 ENSG00000064201 CDS Human protein_coding chr11:2325425 chr11:2325427 nonsynonymous SNV 0.776 1 23 hm5C_associated_SNPs_120026 0 1 1 SRSF1 POSTAR2 ENCODE chr11:2325371-2325428
64251 chr19 53994704 53994704 1 + C T ESCA 53994703 + 53994683 53994723 41 ATGCCATCGTAGACTTCATACCGGAGAGAAGCCTTACAAGT ATGCCATCGTAGACTTCATACTGGAGAGAAGCCTTACAAGT < 41bp 0.546003823015793 0.765261085593358 0.29540586 0.04789701 prediction 0.43851452515513 Functional Gain - ZNF813 ENSG00000198346 CDS Human protein_coding chr19:53994703 chr19:53994704 synonymous SNV . 0 22 hm5C_associated_SNPs_120033 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:53994694-53994722
64251 chr20 43547903 43547903 1 + T C UCEC 43547901 + 43547881 43547921 41 GCTTTGTCAACTTTGAGAAGCATGAGGAAGCCCAGAAGGTA GCTTTGTCAACTTTGAGAAGCACGAGGAAGCCCAGAAGGTA < 41bp 0.593256885610317 0.812512007819516 0.2566244 0.26782924 prediction 0.438510244418398 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547901 chr20:43547903 synonymous SNV . 0 23 hm5C_associated_SNPs_120035 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:43547879-43547903
64251 chrX 56591767 56591767 1 + C A rs45559331 56591766 + 56591746 56591786 41 GGGGGTGGGGGTGCTGGGAACCGCTATAGGCCCTGTAGGCC GGGGGTGGGGGTGCTGGGAACAGCTATAGGCCCTGTAGGCC < 41bp 0.592240307432568 0.811493539877462 0.31451803 0.2535916 prediction 0.438506464889788 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591766 chrX:56591767 synonymous SNV . 0 22 hm5C_associated_SNPs_120036 2 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:56591739-56591768
64251 chr2 27558560 27558560 1 - G A SKCM 27558561 - 27558541 27558581 41 CCCTTTAGGCTCCTCTCCTGCCCCGGTTGGGTCTCTTGGCT CCCTTTAGGCTCCTCTCCTGCTCCGGTTGGGTCTCTTGGCT < 41bp 0.446180503733198 0.719250361137823 0.13804036 0.26462412 prediction 0.438500722275645 Functional Gain - GTF3C2 ENSG00000115207 CDS Human protein_coding chr2:27558561 chr2:27558560 nonsynonymous SNV 0.908 4 22 hm5C_associated_SNPs_120038 0 0 5 BUD13 POSTAR2 ENCODE chr2:27558535-27558574
64251 chr1 116929940 116929940 1 + C A LGG 116929939 + 116929919 116929959 41 TCTGCTCGTGCAGCTGAGATCCTGGCGCGAGATGGTCCCAA TCTGCTCGTGCAGCTGAGATCATGGCGCGAGATGGTCCCAA < 41bp 0.456778081266256 0.719245603163905 0.65169543 0.81455785 prediction 0.438491206327809 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116929939 chr1:116929940 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120041 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:116929914-116929952
64251 chr1 36769580 36769580 1 + C T STAD 36769579 + 36769559 36769599 41 GACGAGAGTGGGACAGAGAACCGAGAAGAGAAGGACAATAT GACGAGAGTGGGACAGAGAACTGAGAAGAGAAGGACAATAT < 41bp 0.476785755792173 0.719226354413534 0.4582101 0.37178773 prediction 0.438452708827069 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36769579 chr1:36769580 stopgain 0.998 0 22 hm5C_associated_SNPs_120044 0 0 38 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:36769494-36769615
64251 chr14 20444457 20444457 1 + C A LUAD 20444456 + 20444436 20444476 41 CTCTGCAAGCATGGCGAAGGCCCGCTCCACATTGACTGCTC CTCTGCAAGCATGGCGAAGGCACGCTCCACATTGACTGCTC < 41bp 0.596366168698182 0.815592237421082 0.08725998 0.1621894 prediction 0.4384521374458 Functional Gain - OR4K15 ENSG00000169488 CDS Human protein_coding chr14:20444456 chr14:20444457 synonymous SNV . 0 22 hm5C_associated_SNPs_120046 0 0 3 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr14:20444440-20444460
64251 chr19 41884337 41884337 1 + C T rs73931469 41884336 + 41884316 41884356 41 CTTAAGAGAGATAGCCTTTGCCGAGTCCCTGAGGGGTTTGC CTTAAGAGAGATAGCCTTTGCTGAGTCCCTGAGGGGTTTGC < 41bp 0.484725198870219 0.719224904380198 0.24911061 0.21827215 prediction 0.438449808760395 Functional Gain - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884336 chr19:41884337 synonymous SNV . 0 22 hm5C_associated_SNPs_120048 0 0 2 TARDBP POSTAR2 DRA001158,DRS012385 chr19:41884333-41884374
64251 chr7 2687663 2687663 1 + C T HNSC 2687662 + 2687642 2687682 41 CTGGTGCTGGTTGGCCTCATCCGCAGCTCCAAGGGCATCCT CTGGTGCTGGTTGGCCTCATCTGCAGCTCCAAGGGCATCCT < 41bp 0.59261856415076 0.811842792040035 0.79564947 0.8079607 prediction 0.43844845577855 Functional Gain - TTYH3 ENSG00000136295 CDS Human protein_coding chr7:2687662 chr7:2687663 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_120049 0 0 7 DDX3X POSTAR2 ENCODE chr7:2687655-2687674
64251 chr17 37872618 37872618 1 + C G BLCA 37872617 + 37872597 37872637 41 CTGCTGGGGTCCAGGGCCCACCCAGTGTGTCAACTGCAGCC CTGCTGGGGTCCAGGGCCCACGCAGTGTGTCAACTGCAGCC < 41bp 0.402521365358508 0.719221966502639 0.323075 0.2522382 prediction 0.438443933005279 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872617 chr17:37872618 synonymous SNV . 0 22 hm5C_associated_SNPs_120051 0 0 2 PPIG POSTAR2 ENCODE chr17:37872542-37872623
64251 chr22 21134279 21134279 1 + C T HNSC 21134278 + 21134258 21134298 41 TCAGTCAATGACCTTTATATCCAGAAGCAGTTTCCAATCCT TCAGTCAATGACCTTTATATCTAGAAGCAGTTTCCAATCCT < 41bp 0.551039482642567 0.770239363443069 0.8262726 0.31937972 prediction 0.438399761601005 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21134278 chr22:21134279 stopgain 0.964 1 22 hm5C_associated_SNPs_120055 0 0 1 SND1 POSTAR2 ENCODE chr22:21134234-21134279
64251 chr3 66430877 66430877 1 - G A rs332374 66430878 - 66430858 66430898 41 CTTTAGCAAGGTTGTATCACCCGGACTCCACAGAGCTACAG CTTTAGCAAGGTTGTATCACCTGGACTCCACAGAGCTACAG < 41bp 0.558335045204077 0.777529666104771 0.26159412 0.22112283 prediction 0.438389241801388 Functional Gain - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66430878 chr3:66430877 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_120057 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:66430832-66430884
64251 chr7 100275110 100275110 1 + C G rs78530908 100275109 + 100275089 100275129 41 GCTCTGACCCCGGCGCTTCCCCTGCTCCGCAGGTCCACGCC GCTCTGACCCCGGCGCTTCCCGTGCTCCGCAGGTCCACGCC < 41bp 0.49303098733227 0.719186122437728 0.049156845 0.16938677 prediction 0.438372244875455 Functional Gain - GNB2 ENSG00000172354 intronic Human protein_coding chr7:100275109 chr7:100275110 . . 0 22 hm5C_associated_SNPs_120058 0 0 5 EFTUD2 POSTAR2 ENCODE chr7:100275067-100275115
64251 chr11 65747011 65747011 1 + C A rs192255821 65747007 + 65746987 65747027 41 TGGGCTGGGAGTATTTGGTGCACGCGGTATGGGGAGGGCTG TGGGCTGGGAGTATTTGGTGCACGAGGTATGGGGAGGGCTG < 41bp 0.354942522466692 0.719180626609268 0.21602622 0.38185787 prediction 0.438361253218537 Functional Gain - SART1 ENSG00000175467 UTR3 Human protein_coding chr11:65747007 chr11:65747011 . . 0 25 hm5C_associated_SNPs_120060 0 0 1 RBFOX2 POSTAR2 ENCODE chr11:65746995-65747055
64251 chr8 145151944 145151944 1 + A G LUSC 145151941 + 145151921 145151961 41 GCTTGTCGTTGGCCAGGCACCCCAGCTACCATGTCCCAGAT GCTTGTCGTTGGCCAGGCACCCCGGCTACCATGTCCCAGAT < 41bp 0.561884989964302 0.781063078214023 0.12767929 0.37833917 prediction 0.438356176499441 Functional Gain - CYC1 ENSG00000179091 CDS Human protein_coding chr8:145151941 chr8:145151944 synonymous SNV . 0 24 hm5C_associated_SNPs_120061 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145151940-145151960
64251 chr19 54609254 54609254 1 + C A MESO 54609253 + 54609233 54609273 41 CTCCACAGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCA CTCCACAGCTGTAATTCTGCCACCATTGAGCCCCTACTTCA < 41bp 0.593951127866772 0.813128508506681 0.022016913 0.031847417 prediction 0.438354761279819 Functional Gain - NDUFA3 ENSG00000170906 CDS Human protein_coding chr19:54609253 chr19:54609254 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_120062 0 0 17 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:54609235-54609276
64251 chr13 73329399 73329399 1 + A G rs144607013 73329396 + 73329376 73329416 41 GACTAAGCTTAAGAGTTCCTCGCATATATCGTTGTGCACAG GACTAAGCTTAAGAGTTCCTCGCGTATATCGTTGTGCACAG < 41bp 0.495637194241643 0.719169392336026 0.0507589 0.19977486 prediction 0.438338784672051 Functional Gain - BORA ENSG00000136122 UTR3 Human protein_coding chr13:73329396 chr13:73329399 . . 0 24 hm5C_associated_SNPs_120070 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:73329352-73329408
64251 chr6 33179091 33179091 1 + T G rs564866501 33179089 + 33179069 33179109 41 GCCCTGCTCCCAAGCGACCCCGTGGAGGGGGCGCAGGGGGG GCCCTGCTCCCAAGCGACCCCGGGGAGGGGGCGCAGGGGGG < 41bp 0.634426607832928 0.85358524838113 0.10189551 0.6215462 prediction 0.438317281096405 Functional Gain - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179089 chr6:33179091 synonymous SNV . 0 23 hm5C_associated_SNPs_120072 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:33179074-33179093
64251 chr17 40690691 40690691 1 + C T HNSC 40690690 + 40690670 40690710 41 TTCCTTCTGTTCCTCCAGCACCGGGTCCTGGACCAGATGCG TTCCTTCTGTTCCTCCAGCACTGGGTCCTGGACCAGATGCG < 41bp 0.475638782461658 0.719155851244125 0.6937239 0.41716462 prediction 0.438311702488249 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40690690 chr17:40690691 nonsynonymous SNV 0.569 3 22 hm5C_associated_SNPs_120074 0 0 2 BUD13 POSTAR2 ENCODE chr17:40690671-40690745
64251 chr3 51696569 51696569 1 + T C COAD 51696567 + 51696547 51696587 41 GCCCAGAGATCATCAGTGAGCTTCAGCAGTATGCAGATGTG GCCCAGAGATCATCAGTGAGCTCCAGCAGTATGCAGATGTG < 41bp 0.427531088061391 0.719154361477229 0.18525177 0.3928749 prediction 0.438308722954458 Functional Gain - RAD54L2 ENSG00000164080 CDS Human protein_coding chr3:51696567 chr3:51696569 synonymous SNV . 0 23 hm5C_associated_SNPs_120076 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:51696538-51696576
64251 chr16 30768802 30768802 1 + T C BRCA 30768800 + 30768780 30768820 41 GGGGAAAATGTTGGGGGTCACTTGGTCTTGCTCTTGCCTTT GGGGAAAATGTTGGGGGTCACTCGGTCTTGCTCTTGCCTTT < 41bp 0.598814928427365 0.817962195264619 0.8758465 0.9131934 prediction 0.438294533674509 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30768800 chr16:30768802 nonsynonymous SNV 0.986 4 23 hm5C_associated_SNPs_120078 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30768798-30768844
64251 chr1 228646127 228646127 1 + T G CESC 228646124 + 228646104 228646144 41 TCCCGCGAAGTGCAGACGGCCGTTCGCCTGCTGCTGCCCGG TCCCGCGAAGTGCAGACGGCCGTGCGCCTGCTGCTGCCCGG < 41bp 0.341969200262211 0.719146831593486 0.09941694 0.18035635 prediction 0.438293663186972 Functional Gain - HIST3H2BB ENSG00000196890 CDS Human protein_coding chr1:228646124 chr1:228646127 synonymous SNV . 0 24 hm5C_associated_SNPs_120081 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:228646060-228646140
64251 chr19 34843710 34843710 1 + C T ESCA 34843709 + 34843689 34843729 41 GCTGCAGTCCCCAGTGTGGGCCGCAACCAACGACTGCAGTG GCTGCAGTCCCCAGTGTGGGCTGCAACCAACGACTGCAGTG < 41bp 0.56565330796242 0.78479431872082 0.23191446 0.19296795 prediction 0.4382820215168 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34843709 chr19:34843710 nonsynonymous SNV 0.012 0 22 hm5C_associated_SNPs_120084 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:34843688-34843712
64251 chr8 48883220 48883220 1 + C A SKCM 48883219 + 48883199 48883239 41 GTACGTGTACAACCTCGTCCCCAGGGGCCAGTACACGTCTG GTACGTGTACAACCTCGTCCCAAGGGGCCAGTACACGTCTG < 41bp 0.614907056769823 0.834040322339564 0.8709548 0.8802357 prediction 0.438266531139481 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48883219 chr8:48883220 synonymous SNV . 0 22 hm5C_associated_SNPs_120086 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:48883182-48883230
64251 chr1 43241028 43241028 1 + C T COAD 43241027 + 43241007 43241047 41 GCCAGTCAGTGGCCCTGCCTCCGTGCACTGAACCCAACTTC GCCAGTCAGTGGCCCTGCCTCTGTGCACTGAACCCAACTTC < 41bp 0.514366545895202 0.733487574183934 0.29312363 0.21289352 prediction 0.438242056577464 Functional Gain - C1orf50 ENSG00000164008 CDS Human protein_coding chr1:43241027 chr1:43241028 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_120092 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43241009-43241056
64251 chr9 116770806 116770806 1 + C T SKCM 116770805 + 116770785 116770825 41 GGACGAGGTGAAGGAGGAGCCCCCGGAGCCATTCCAGAAAA GGACGAGGTGAAGGAGGAGCCTCCGGAGCCATTCCAGAAAA < 41bp 0.45080762949513 0.719108693374062 0.8413323 0.895233 prediction 0.438217386748124 Functional Gain - ZNF618 ENSG00000157657 CDS Human protein_coding chr9:116770805 chr9:116770806 synonymous SNV . 0 22 hm5C_associated_SNPs_120096 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:116770798-116770820
64251 chr10 75557714 75557714 1 + C T LUAD 75557713 + 75557693 75557733 41 GGGGGCCACCAGGGTCCTCACCGCAACCTGCACCTTTGCGC GGGGGCCACCAGGGTCCTCACTGCAACCTGCACCTTTGCGC < 41bp 0.613871644215391 0.832969913927378 0.54047406 0.41368192 prediction 0.438196539423973 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75557713 chr10:75557714 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120100 0 0 2 GEMIN5 POSTAR2 ENCODE chr10:75557664-75557736
64251 chr19 42827820 42827820 1 + C A LUAD 42827819 + 42827799 42827839 41 CTTCAGCCGGAGTCCCTGGACCCGGAGGGAGCCAATCCGCT CTTCAGCCGGAGTCCCTGGACACGGAGGGAGCCAATCCGCT < 41bp 0.597509170910534 0.816600934085668 0.31553715 0.3273632 prediction 0.438183526350267 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42827819 chr19:42827820 nonsynonymous SNV 0.182 1 22 hm5C_associated_SNPs_120102 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:42827794-42827828
64251 chr22 39917600 39917600 1 + C T SKCM 39917599 + 39917579 39917619 41 CTTCAAACCTCATGGGTTCTCCAGCGACAAGGCTAAGGCGG CTTCAAACCTCATGGGTTCTCTAGCGACAAGGCTAAGGCGG < 41bp 0.514451866181562 0.733534493297929 0.6984522 0.27183002 prediction 0.438165254232734 Functional Gain - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39917599 chr22:39917600 synonymous SNV . 0 22 hm5C_associated_SNPs_120107 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chr22:39917556-39917606
64251 chr7 128097400 128097400 1 + C T SKCM 128097399 + 128097379 128097419 41 CTTCGTTAGAGTGATGGAGTCCCTAGAGGGCTTACTAGAGA CTTCGTTAGAGTGATGGAGTCTCTAGAGGGCTTACTAGAGA < 41bp 0.589646604521449 0.808724487376251 0.11103335 0.91959953 prediction 0.438155765709604 Functional Gain - HILPDA ENSG00000135245 CDS Human protein_coding chr7:128097399 chr7:128097400 synonymous SNV . 0 22 hm5C_associated_SNPs_120111 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:128097362-128097400
64251 chr1 44437269 44437269 1 + C G PRAD 44437268 + 44437248 44437288 41 GCCCTGACCCAGACCTTGACCCAGACCTGAGTCGGCTGCTC GCCCTGACCCAGACCTTGACCGAGACCTGAGTCGGCTGCTC < 41bp 0.668493715512767 0.887570326183951 0.58109283 0.82112 prediction 0.438153221342368 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437268 chr1:44437269 nonsynonymous SNV 0.821 3 22 hm5C_associated_SNPs_120112 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:44437269-44437282
64251 chr15 29346854 29346854 1 + C T LUSC 29346853 + 29346833 29346873 41 GCCCCGAGCATGGGCCTGAGCCAGGGCCTGAGGACTCTGTA GCCCCGAGCATGGGCCTGAGCTAGGGCCTGAGGACTCTGTA < 41bp 0.566357474592017 0.785431476018783 0.91165864 0.23862305 prediction 0.438148002853531 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29346853 chr15:29346854 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_120114 0 0 1 UCHL5 POSTAR2 ENCODE chr15:29346776-29346863
64251 chr11 252595 252595 1 + A G STAD 252592 + 252572 252612 41 AGCACCAGGCCCATGACATCCTCACCTAGGGCCCCCTGGTT AGCACCAGGCCCATGACATCCTCGCCTAGGGCCCCCTGGTT < 41bp 0.476278055337324 0.719073656725578 0.060876995 0.15387642 prediction 0.438147313451157 Functional Gain - PSMD13 ENSG00000185627 CDS Human protein_coding chr11:252592 chr11:252595 nonsynonymous SNV 0.994 4 24 hm5C_associated_SNPs_120115 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:252586-252609
64251 chr1 26607726 26607726 1 + T G rs7544 26607724 + 26607704 26607744 41 CCTGTCATTCCTAACCTAACCTTAGAGTCCCTCCCCCAATG CCTGTCATTCCTAACCTAACCTGAGAGTCCCTCCCCCAATG < 41bp 0.396806680294355 0.719069908610863 0.037192345 0.26926467 prediction 0.438139817221726 Functional Gain - SH3BGRL3 ENSG00000142669 UTR3 Human protein_coding chr1:26607724 chr1:26607726 . . 0 23 hm5C_associated_SNPs_120118 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:26607684-26607739
64251 chr1 220826564 220826564 1 + C T UCEC 220826563 + 220826543 220826583 41 ACTTTCCATGGTGAACAGCTCCGGGAGCGACGCAGCGTTGC ACTTTCCATGGTGAACAGCTCTGGGAGCGACGCAGCGTTGC < 41bp 0.585408604049096 0.804477348670573 0.5373266 0.38378304 prediction 0.438137489242954 Functional Gain - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220826563 chr1:220826564 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_120119 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:220826558-220826585
64251 chrX 135067863 135067863 1 + C T UCEC 135067862 + 135067842 135067882 41 AAGCAAGCCGAGGAGAGCCACCGGCAGGACAGCGCCAACCT AAGCAAGCCGAGGAGAGCCACTGGCAGGACAGCGCCAACCT < 41bp 0.543803276996696 0.762871226226097 0.27045757 0.17575136 prediction 0.438135898458802 Functional Gain - SLC9A6 ENSG00000198689 CDS Human protein_coding chrX:135067862 chrX:135067863 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_120121 0 0 1 ZNF622 POSTAR2 ENCODE chrX:135067846-135067958
64251 chr1 28858420 28858420 1 + C T UCEC 28858419 + 28858399 28858439 41 ATGTGATGGAGAGGAAGAAGCCGGCCCTGGTATCCATTCCG ATGTGATGGAGAGGAAGAAGCTGGCCCTGGTATCCATTCCG < 41bp 0.552922167531767 0.771988331960483 0.33643192 0.52678466 prediction 0.438132328857433 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28858419 chr1:28858420 nonsynonymous SNV 0.948 3 22 hm5C_associated_SNPs_120122 0 0 21 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28858395-28858422
64251 chr3 152880777 152880777 1 + C T BRCA 152880776 + 152880756 152880796 41 GACATCAAGCCCATGCGGGACCAGATCATCCGCGTGAAGCG GACATCAAGCCCATGCGGGACTAGATCATCCGCGTGAAGCG < 41bp 0.536728949988596 0.755778375109271 0.14559501 0.18536389 prediction 0.438098850241349 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880776 chr3:152880777 stopgain 1.000 0 22 hm5C_associated_SNPs_120127 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr3:152880777-152880778
64251 chr12 32134500 32134500 1 + A G LIHC 32134497 + 32134477 32134517 41 TTGGACACAACAGTGTATATCTAAGGGACTGACTTACCCAG TTGGACACAACAGTGTATATCTAGGGGACTGACTTACCCAG < 41bp 0.519170534909566 0.738218401925996 0.44191837 0.8972597 prediction 0.438095734032859 Functional Gain - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32134497 chr12:32134500 nonsynonymous SNV 0.146 0 24 hm5C_associated_SNPs_120129 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr12:32134499-32134520
64251 chr1 179042326 179042326 1 + A G rs577118662 179042323 + 179042303 179042343 41 CAACCTTTTTGTCCCTTTCTCATAAGAAAGGGACACTCCTA CAACCTTTTTGTCCCTTTCTCATGAGAAAGGGACACTCCTA < 41bp 0.480183428420848 0.71904771415479 0.67848593 0.8974443 prediction 0.43809542830958 Functional Gain - FAM20B ENSG00000116199 UTR3 Human protein_coding chr1:179042323 chr1:179042326 . . 0 24 hm5C_associated_SNPs_120130 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:179042297-179042329
64251 chr2 172823010 172823010 1 + C G LUAD 172823009 + 172822989 172823029 41 TCTATAATTACTATGTGTACCCAGACAAAACCCGGCCACGT TCTATAATTACTATGTGTACCGAGACAAAACCCGGCCACGT < 41bp 0.659195093067214 0.878240766503695 0.23404652 0.4978211 prediction 0.438091346872963 Functional Gain - HAT1 ENSG00000128708 CDS Human protein_coding chr2:172823009 chr2:172823010 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120131 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:172822980-172823013
64251 chr11 67075131 67075131 1 + C T rs57238619 67075130 + 67075110 67075150 41 CTACCAGGAGAGACTGAACTCCGAACAGAGCTGCCTCAATG CTACCAGGAGAGACTGAACTCTGAACAGAGCTGCCTCAATG < 41bp 0.594727631410777 0.813770516446377 0.33821738 0.22793949 prediction 0.438085770071199 Functional Gain - SSH3 ENSG00000172830 CDS Human protein_coding chr11:67075130 chr11:67075131 synonymous SNV . 0 22 hm5C_associated_SNPs_120133 0 0 1 XPO5 POSTAR2 ENCODE chr11:67075088-67075141
64251 chr19 18779272 18779272 1 + C A rs367839426 18779268 + 18779248 18779288 41 GGAGGTAGGCTGCAGCCACACGTGCGTGGCCGTGCTGGACA GGAGGTAGGCTGCAGCCACACGTGAGTGGCCGTGCTGGACA < 41bp 0.712621811949487 0.931662858601174 0.54925174 0.79951084 prediction 0.438082093303373 Functional Gain - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779268 chr19:18779272 stopgain 0.928 1 25 hm5C_associated_SNPs_120135 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:18779269-18779287
64251 chr1 109779081 109779081 1 + C T UCEC 109779080 + 109779060 109779100 41 TTTCCGGGCTCAGGAGCCTTCCGTGAGTTGGTCTCCTGTTC TTTCCGGGCTCAGGAGCCTTCTGTGAGTTGGTCTCCTGTTC < 41bp 0.51216021646281 0.731198083367167 0.90162075 0.8784069 prediction 0.438075733808713 Functional Gain - SARS ENSG00000031698 CDS Human protein_coding chr1:109779080 chr1:109779081 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_120138 0 0 13 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:109779038-109779082
64251 chr17 73227514 73227514 1 + C A UCEC 73227510 + 73227490 73227530 41 TGCAAGCTCCTCCAGTCACACAACCTCTAGTAAGTGGCCGG TGCAAGCTCCTCCAGTCACACAACATCTAGTAAGTGGCCGG < 41bp 0.290379511577496 0.719036378363177 0.15987003 0.16373849 prediction 0.438072756726353 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73227510 chr17:73227514 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_120140 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:73227493-73227516
64251 chr6 350555 350555 1 + C G rs562943066 350554 + 350534 350574 41 GACCGGGAAAAACAAAGTTGCCTGATTCCGCGCAGGTGCAC GACCGGGAAAAACAAAGTTGCGTGATTCCGCGCAGGTGCAC < 41bp 0.636468615588352 0.855498610048858 0.25787586 0.3672713 prediction 0.438059988921013 Functional Gain - DUSP22 ENSG00000112679 UTR3 Human protein_coding chr6:350554 chr6:350555 . . 0 22 hm5C_associated_SNPs_120143 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr6:350526-350619
64251 chr10 1061779 1061779 1 + C T SKCM 1061778 + 1061758 1061798 41 TGCTCCCCCGTCCTCTGTGGCCCGGAGTGGGAGTTGCTCTC TGCTCCCCCGTCCTCTGTGGCTCGGAGTGGGAGTTGCTCTC < 41bp 0.607987802832055 0.827017430186519 0.39975187 0.29208612 prediction 0.438059254708929 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061778 chr10:1061779 synonymous SNV . 0 22 hm5C_associated_SNPs_120144 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr10:1061746-1061781
64251 chr2 75099464 75099464 1 + T C LUAD 75099462 + 75099442 75099482 41 GCCGAATGCCTGGCTAACTTCATGGATAAGCTACAAATCAA GCCGAATGCCTGGCTAACTTCACGGATAAGCTACAAATCAA < 41bp 0.430314632096853 0.719029352107708 0.34373543 0.37596825 prediction 0.438058704215416 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75099462 chr2:75099464 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_120145 0 0 1 DDX24 POSTAR2 ENCODE chr2:75099463-75099513
64251 chr20 36488339 36488339 1 + C T STAD 36488338 + 36488318 36488358 41 AGAGATCATCGACAATGACACCGAGGAGGAGTTCTACCTCC AGAGATCATCGACAATGACACTGAGGAGGAGTTCTACCTCC < 41bp 0.552310407578842 0.771328270163755 0.30866677 0.33575696 prediction 0.438035725169825 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36488338 chr20:36488339 synonymous SNV . 0 22 hm5C_associated_SNPs_120149 0 0 1 U2AF2 POSTAR2 ENCODE chr20:36488293-36488344
64251 chr7 99123521 99123521 1 + C T GBM 99123520 + 99123500 99123540 41 CTGGGTGGCGCCAGAACACACCGAAAGGAGCGTTCCTCAGG CTGGGTGGCGCCAGAACACACTGAAAGGAGCGTTCCTCAGG < 41bp 0.57835957043117 0.797367095775859 0.2903442 0.36580417 prediction 0.438015050689379 Functional Gain - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99123520 chr7:99123521 synonymous SNV . 0 22 hm5C_associated_SNPs_120154 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:99123498-99123522
64251 chr19 10893735 10893735 1 + C A rs3745674 10893731 + 10893711 10893751 41 AGAGGAAGTTCTTCCTCTCCCACCCGGCCTACCGGCACATG AGAGGAAGTTCTTCCTCTCCCACCAGGCCTACCGGCACATG < 41bp 0.32349258771053 0.719007350709477 0.06529385 0.14332658 prediction 0.438014701418953 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893731 chr19:10893735 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_120155 0 0 7 CPSF4 POSTAR2 GSE37401,GSM917667 chr19:10893718-10893744
64251 chr2 61343153 61343153 1 + A G STAD 61343150 + 61343130 61343170 41 AAAGAAGTTCACTAGACAACCAAAAAAGCAGGTATCTTCAC AAAGAAGTTCACTAGACAACCAAGAAAGCAGGTATCTTCAC < 41bp 0.521258987104019 0.740260156975063 0.23434174 0.51953334 prediction 0.438002339742088 Functional Gain - KIAA1841 ENSG00000162929 CDS Human protein_coding chr2:61343150 chr2:61343153 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_120157 0 0 1 BUD13 POSTAR2 ENCODE chr2:61343063-61343220
64251 chr10 70644377 70644377 1 + C T OV 70644376 + 70644356 70644396 41 TCACAGAGGTCTTGGGGAATCCGTATCTTGGGTACAGAATG TCACAGAGGTCTTGGGGAATCTGTATCTTGGGTACAGAATG < 41bp 0.548552177176915 0.767552162096656 0.29477972 0.21694553 prediction 0.437999969839482 Functional Gain - STOX1 ENSG00000165730 CDS Human protein_coding chr10:70644376 chr10:70644377 synonymous SNV . 0 22 hm5C_associated_SNPs_120158 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:70644355-70644378
64251 chr15 90119409 90119409 1 + C T SKCM 90119408 + 90119388 90119428 41 AAGTTGTTGCCCAAGAGAGTCCGGGAAGTCATGGTCGCCCG AAGTTGTTGCCCAAGAGAGTCTGGGAAGTCATGGTCGCCCG < 41bp 0.518705109504773 0.737693135452258 0.39860418 0.7679744 prediction 0.437976051894969 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90119408 chr15:90119409 nonsynonymous SNV 0.887 1 22 hm5C_associated_SNPs_120160 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:90119396-90119418
64251 chr2 113346508 113346508 1 + C A rs201419705 113346504 + 113346484 113346524 41 GGAAAACTGGACATGAATGACTGCCCCCACGCCCCTCCCCT GGAAAACTGGACATGAATGACTGCACCCACGCCCCTCCCCT < 41bp 0.692824684975245 0.911812546912508 0.014166683 0.04270339 prediction 0.437975723874527 Functional Gain - CHCHD5 ENSG00000125611 UTR3 Human protein_coding chr2:113346504 chr2:113346508 . . 0 25 hm5C_associated_SNPs_120161 0 0 5 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:113346501-113346522
64251 chr19 37618443 37618443 1 + C A UCEC 37618439 + 37618419 37618459 41 TTTAGTCGTGATTCACAACTCAGTCTTCATCAGAGACTTCA TTTAGTCGTGATTCACAACTCAGTATTCATCAGAGACTTCA < 41bp 0.318015297266014 0.718986801506704 0.013431609 0.038455397 prediction 0.437973603013408 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37618439 chr19:37618443 nonsynonymous SNV 0.955 0 25 hm5C_associated_SNPs_120162 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr19:37618423-37618451
64251 chr19 47258842 47258842 1 + C T rs2287717 47258841 + 47258821 47258861 41 GCCCCGTCGTGCCTCTGCTGCCGGCCCCCGTGTCACCGTCC GCCCCGTCGTGCCTCTGCTGCTGGCCCCCGTGTCACCGTCC < 41bp 0.508620757194596 0.727582146126314 0.17264298 0.2438915 prediction 0.437922777863436 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258841 chr19:47258842 synonymous SNV . 0 22 hm5C_associated_SNPs_120177 1 0 1 DDX3X POSTAR2 ENCODE chr19:47258777-47258852
64251 chr15 31234047 31234047 1 - T C LUSC 31234050 - 31234030 31234070 41 TGCCACGTGTCTCTGGAACACACATAAAACTGTGGAAACTG TGCCACGTGTCTCTGGAACACACGTAAAACTGTGGAAACTG < 41bp 0.493587126652458 0.718947575166389 0.059816808 0.12682828 prediction 0.437895150332778 Functional Gain - MTMR10 ENSG00000166912 CDS Human protein_coding chr15:31234050 chr15:31234047 nonsynonymous SNV 0.285 0 24 hm5C_associated_SNPs_120181 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:31234000-31234076
64251 chr9 137296976 137296976 1 + C A rs77041079 137296975 + 137296955 137296995 41 GGACAGACCAAGGCAGACCCCCGGGGCGGCCCTGTGCTGTG GGACAGACCAAGGCAGACCCCAGGGGCGGCCCTGTGCTGTG < 41bp 0.525880726552434 0.744821245487927 0.6105977 0.91463196 prediction 0.437881037870988 Functional Gain - RXRA ENSG00000186350 intronic Human protein_coding chr9:137296975 chr9:137296976 . . 0 22 hm5C_associated_SNPs_120185 0 0 9 RTCB POSTAR2 GSE38201,GSM936508 chr9:137296970-137296993
64251 chr16 841796 841796 1 + C G rs58147239 841795 + 841775 841815 41 GGCAGTCCCTGGCTGCTAGGCCGGGAGCGTCCTGTAGGTGC GGCAGTCCCTGGCTGCTAGGCGGGGAGCGTCCTGTAGGTGC < 41bp 0.569787469680124 0.788701902080481 0.70418334 0.9237546 prediction 0.437828864800714 Functional Gain - CHTF18 ENSG00000127586 intronic Human protein_coding chr16:841795 chr16:841796 . . 0 22 hm5C_associated_SNPs_120195 0 0 24 FUS POSTAR2 DRA001158,DRS012384 chr16:841773-841808
64251 chr16 27374876 27374876 1 + C T KIRP 27374875 + 27374855 27374895 41 CATGGCCAGGAGGATGGTGGCCAGACCCCTGTCATGGCCAG CATGGCCAGGAGGATGGTGGCTAGACCCCTGTCATGGCCAG < 41bp 0.563585543173372 0.782498974928688 0.28126317 0.2646265 prediction 0.437826863510633 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374875 chr16:27374876 stopgain 0.108 0 22 hm5C_associated_SNPs_120196 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:27374875-27374876
64251 chr16 29820932 29820932 1 + C T SKCM 29820931 + 29820911 29820951 41 CTCCAGGCCCCGCGGGCTGACCGCATCCTGTGCAAGCTGTG CTCCAGGCCCCGCGGGCTGACTGCATCCTGTGCAAGCTGTG < 41bp 0.588864524974882 0.807771528588477 0.09183225 0.18300933 prediction 0.437814007227191 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29820931 chr16:29820932 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_120199 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29820865-29821031
64251 chr11 59562950 59562950 1 + C A rs142968661 59562949 + 59562929 59562969 41 GTGAAATACCAGAGTCAGGCCCGGAAGGTGAGACTCTCCTG GTGAAATACCAGAGTCAGGCCAGGAAGGTGAGACTCTCCTG < 41bp 0.605074899761326 0.823978877825116 0.33297002 0.5777963 prediction 0.437807956127581 Functional Gain - STX3 ENSG00000166900 CDS Human protein_coding chr11:59562949 chr11:59562950 synonymous SNV . 0 22 hm5C_associated_SNPs_120200 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr11:59562931-59562951
64251 chr9 135866840 135866840 1 + C A rs11243971 135866839 + 135866819 135866859 41 CTGGTCACCTTGGATTTTAGCCGGCCTCTTTCTGGCTATAA CTGGTCACCTTGGATTTTAGCAGGCCTCTTTCTGGCTATAA < 41bp 0.480543535276722 0.718902276417923 0.8231913 0.90942824 prediction 0.437804552835846 Functional Gain - GFI1B ENSG00000165702 UTR3 Human protein_coding chr9:135866839 chr9:135866840 . . 0 22 hm5C_associated_SNPs_120201 0 0 1 UPF1 POSTAR2 ENCODE chr9:135866810-135866909
64251 chr1 153618128 153618128 1 + C A rs142484773 153618127 + 153618107 153618147 41 CTTTTGTTCATCCCTGTTGCCCCCACAGAAACATCCCAGAA CTTTTGTTCATCCCTGTTGCCACCACAGAAACATCCCAGAA < 41bp 0.594973158981248 0.813870751984343 0.023503155 0.06976491 prediction 0.43779518600619 Functional Gain - CHTOP ENSG00000160679 UTR3 Human protein_coding chr1:153618127 chr1:153618128 . . 0 22 hm5C_associated_SNPs_120203 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:153618103-153618137
64251 chr18 39575890 39575890 1 + C T STAD 39575889 + 39575869 39575909 41 AGCAAACACCACAAGCTTGCCCGGAGTTTAAGAAGTGGACC AGCAAACACCACAAGCTTGCCTGGAGTTTAAGAAGTGGACC < 41bp 0.527569487589323 0.746466903794802 0.27678424 0.13962537 prediction 0.437794832410958 Functional Gain - PIK3C3 ENSG00000078142 CDS Human protein_coding chr18:39575889 chr18:39575890 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_120204 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:39575881-39575910
64251 chr13 98086962 98086962 1 + C G GBM 98086961 + 98086941 98086981 41 AAGAACGGCCAGGGCTTCATCCTCGTCTACAGCCTCGTCAA AAGAACGGCCAGGGCTTCATCGTCGTCTACAGCCTCGTCAA < 41bp 0.414243423027647 0.718894381173254 0.06954911 0.36859453 prediction 0.437788762346508 Functional Gain - RAP2A ENSG00000125249 CDS Human protein_coding chr13:98086961 chr13:98086962 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_120205 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:98086943-98086965
64251 chr8 22462346 22462346 1 + T G rs11555543 22462344 + 22462324 22462364 41 TGTCCCCCCGGTGTCGCTGCCCTGGCCCGCAGGTGGGTTGG TGTCCCCCCGGTGTCGCTGCCCGGGCCCGCAGGTGGGTTGG < 41bp 0.351330119511287 0.718889490331338 0.22437689 0.8772368 prediction 0.437778980662676 Functional Gain - CCAR2;C8orf58 ENSG00000158941 CDS Human protein_coding chr8:22462344 chr8:22462346 unknown . 0 23 hm5C_associated_SNPs_120209 0 0 4 DDX3X POSTAR2 ENCODE chr8:22462266-22462357
64251 chr3 119534285 119534285 1 + A G BLCA 119534282 + 119534262 119534302 41 CAGGCCATCTCCCTCTTCTCCCCAGGTGAGGATCTCCCCTA CAGGCCATCTCCCTCTTCTCCCCGGGTGAGGATCTCCCCTA < 41bp 0.466089098702183 0.718889101692021 0.84735835 0.92455685 prediction 0.437778203384042 Functional Gain - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119534282 chr3:119534285 synonymous SNV . 0 24 hm5C_associated_SNPs_120210 0 0 1 PRPF8 POSTAR2 ENCODE chr3:119534281-119534372
64251 chr11 118951977 118951977 1 + C T UCEC 118951976 + 118951956 118951996 41 CGGAAGGTCATGGATATGATCCGGGCCCAGGAACAGAAACG CGGAAGGTCATGGATATGATCTGGGCCCAGGAACAGAAACG < 41bp 0.490444984136403 0.718861756807392 0.41351432 0.21660304 prediction 0.437723513614783 Functional Gain - VPS11 ENSG00000160695 CDS Human protein_coding chr11:118951976 chr11:118951977 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_120215 0 0 1 RPS3 POSTAR2 ENCODE chr11:118951946-118951996
64251 chr9 139818415 139818415 1 + C T COAD 139818414 + 139818394 139818434 41 TCTTTGTGGTGATGAAGGGCCCGAATGACGCCCTGCTGCGG TCTTTGTGGTGATGAAGGGCCTGAATGACGCCCTGCTGCGG < 41bp 0.591409839943325 0.810270738807036 0.050697535 0.05681947 prediction 0.437721797727421 Functional Gain - TRAF2 ENSG00000127191 CDS Human protein_coding chr9:139818414 chr9:139818415 nonsynonymous SNV 0.629 1 22 hm5C_associated_SNPs_120216 0 0 3 FXR2 POSTAR2 ENCODE chr9:139818394-139818457
64251 chr17 38991197 38991197 1 + T C UCEC 38991195 + 38991175 38991215 41 TCTTACCAGAGGCCATTGGGCCTGGAGTTCCAGTTCCAGTG TCTTACCAGAGGCCATTGGGCCCGGAGTTCCAGTTCCAGTG < 41bp 0.470886227992701 0.718858861250496 0.015833288 0.028437138 prediction 0.437717722500993 Functional Gain - TMEM99 ENSG00000167920 CDS Human protein_coding chr17:38991195 chr17:38991197 synonymous SNV . 0 23 hm5C_associated_SNPs_120218 0 0 3 RBM15 POSTAR2 ENCODE chr17:38991183-38991237
64251 chr7 65546811 65546811 1 + C T ESCA 65546810 + 65546790 65546830 41 AGTGGGAAGCTTTGGGGTGGCCGGTTTGTGGGTGCAGTGGA AGTGGGAAGCTTTGGGGTGGCTGGTTTGTGGGTGCAGTGGA < 41bp 0.482262575636763 0.718856724264753 0.48962644 0.4099229 prediction 0.437713448529506 Functional Gain - ASL ENSG00000126522 CDS Human protein_coding chr7:65546810 chr7:65546811 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120220 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:65546800-65546820
64251 chr20 25187795 25187795 1 + C T SKCM 25187794 + 25187774 25187814 41 GGTGGCGAAGGTGGCATACCCCCTGGGGCTGTGTGTGGGCG GGTGGCGAAGGTGGCATACCCTCTGGGGCTGTGTGTGGGCG < 41bp 0.572260987540021 0.791116708216006 0.11840513 0.11456519 prediction 0.437711441351971 Functional Gain - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25187794 chr20:25187795 synonymous SNV . 0 22 hm5C_associated_SNPs_120221 0 0 2 DDX3X POSTAR2 ENCODE chr20:25187754-25187816
64251 chr2 106498373 106498373 1 + C T STAD 106498372 + 106498352 106498392 41 CGCCCCACAGATAAGCTACACCGGGCCCTCGTCCAGCGGGC CGCCCCACAGATAAGCTACACTGGGCCCTCGTCCAGCGGGC < 41bp 0.542940717720355 0.76179590056538 0.2267626 0.40185696 prediction 0.437710365690049 Functional Gain - NCK2 ENSG00000071051 CDS Human protein_coding chr2:106498372 chr2:106498373 synonymous SNV . 0 22 hm5C_associated_SNPs_120222 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:106498366-106498391
64251 chr16 74336135 74336135 1 + C T UCEC 74336134 + 74336114 74336154 41 TGGTCATCATTGATGTGAAGCCGAAGGACCTAGGGCTGCCT TGGTCATCATTGATGTGAAGCTGAAGGACCTAGGGCTGCCT < 41bp 0.46452538462884 0.718842693298359 0.4481359 0.4057411 prediction 0.437685386596717 Functional Gain - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74336134 chr16:74336135 nonsynonymous SNV 0.973 2 22 hm5C_associated_SNPs_120226 0 0 29 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:74336100-74336140
64251 chr7 129736818 129736818 1 + T C UCEC 129736816 + 129736796 129736836 41 CGCTTCATTCAGTCCTGTCCCATCATAAGGATCCCTAACAG CGCTTCATTCAGTCCTGTCCCACCATAAGGATCCCTAACAG < 41bp 0.417040334028659 0.718823971918783 0.13304299 0.09765467 prediction 0.437647943837566 Functional Gain - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129736816 chr7:129736818 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_120238 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:129736799-129736820
64251 chr17 12847434 12847434 1 + T G PRAD 12847432 + 12847412 12847452 41 GGGAAGCCGCTGGAGGAGCACCTCACCATCAGCGGCCGGGA GGGAAGCCGCTGGAGGAGCACCGCACCATCAGCGGCCGGGA < 41bp 0.360726420247473 0.718821049798577 0.18088329 0.25055277 prediction 0.437642099597154 Functional Gain - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12847432 chr17:12847434 nonsynonymous SNV 0.924 4 23 hm5C_associated_SNPs_120241 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:12847429-12847466
64251 chr20 30193226 30193226 1 + C G rs11545368 30193222 + 30193202 30193242 41 CAGTGGCAGCACCGCCACCGCCGCCGCGGGCCCCAGCTGCG CAGTGGCAGCACCGCCACCGCCGCGGCGGGCCCCAGCTGCG < 41bp 0.644402801538254 0.863220105312906 0.29483566 0.2807333 prediction 0.437634607549304 Functional Gain - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193222 chr20:30193226 synonymous SNV . 0 25 hm5C_associated_SNPs_120242 0 0 5 DDX24 POSTAR2 ENCODE chr20:30193133-30193233
64251 chr12 123463762 123463762 1 + C T UCEC 123463761 + 123463741 123463781 41 TGGAACCTTGTCGTCTGGCTCCGAGCCTCTGCTGTGCGCAA TGGAACCTTGTCGTCTGGCTCTGAGCCTCTGCTGTGCGCAA < 41bp 0.518169061668124 0.736986326917298 0.854964 0.7493399 prediction 0.437634530498347 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463761 chr12:123463762 stopgain 0.482 1 22 hm5C_associated_SNPs_120243 0 0 3 DDX55 POSTAR2 ENCODE chr12:123463714-123463792
64251 chr6 116559428 116559428 1 + C A UCEC 116559427 + 116559407 116559447 41 AATTGGGAGACAGTCCTCATCCTGGAAGAACTCAGAGGGGA AATTGGGAGACAGTCCTCATCATGGAAGAACTCAGAGGGGA < 41bp 0.459086598296833 0.718801620611698 0.21034789 0.4634684 prediction 0.437603241223396 Functional Gain - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116559427 chr6:116559428 nonsynonymous SNV 0.799 3 22 hm5C_associated_SNPs_120249 0 0 3 DDX6 POSTAR2 ENCODE chr6:116559408-116559468
64251 chr7 157208761 157208761 1 + A G LIHC 157208758 + 157208738 157208778 41 GCAGAAGCAGAGAGAGGAGTCGAAGAAGAAGAAGTCGACCA GCAGAAGCAGAGAGAGGAGTCGAGGAAGAAGAAGTCGACCA < 41bp 0.529049948079754 0.747849833584886 0.30050632 0.49788952 prediction 0.437599771010264 Functional Gain - DNAJB6 ENSG00000105993 CDS Human protein_coding chr7:157208758 chr7:157208761 nonsynonymous SNV 0.982 2 24 hm5C_associated_SNPs_120251 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:157208736-157208762
64251 chr16 1551737 1551737 1 + C T SKCM 1551736 + 1551716 1551756 41 ATCGTGGATGGCGGCGTCCCCCAAGCACAGCTGGCGGGCTC ATCGTGGATGGCGGCGTCCCCTAAGCACAGCTGGCGGGCTC < 41bp 0.547410221452977 0.76619595337801 0.3184899 0.18398187 prediction 0.437571463850066 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551736 chr16:1551737 stopgain 0.000 0 22 hm5C_associated_SNPs_120260 0 0 5 GRWD1 POSTAR2 ENCODE chr16:1551724-1551768
64251 chr11 125447449 125447449 1 + T C BRCA 125447446 + 125447426 125447466 41 ATTTATTCCTGTGCTTCAGTCGGTAACAGCCCGAATTATCG ATTTATTCCTGTGCTTCAGTCGGCAACAGCCCGAATTATCG < 41bp 0.511025138090849 0.729793853347526 0.21240962 0.351861 prediction 0.437537430513355 Functional Gain - EI24 ENSG00000149547 CDS Human protein_coding chr11:125447446 chr11:125447449 nonsynonymous SNV 0.856 2 24 hm5C_associated_SNPs_120265 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:125447418-125447450
64251 chr15 44086130 44086130 1 + C A COAD 44086129 + 44086109 44086149 41 TCCCTTTTGTGCTTCCTTCCCCTCAGGTAGCCTCTCTCCCC TCCCTTTTGTGCTTCCTTCCCATCAGGTAGCCTCTCTCCCC < 41bp 0.579282341716335 0.798043929014703 0.11288208 0.15636814 prediction 0.437523174596738 Functional Gain - SERF2 ENSG00000140264 CDS Human protein_coding chr15:44086129 chr15:44086130 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120267 0 0 35 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:44085948-44086197
64251 chr11 6414910 6414910 1 + C T UCEC 6414909 + 6414889 6414929 41 AGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTAGGA AGCTGGAGCTGGAATTATTACTGAATTGTAGCCAGGTAGGA < 41bp 0.575184712814704 0.79393100638847 0.10761553 0.10545635 prediction 0.437492587147533 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6414909 chr11:6414910 stopgain 0.943 0 22 hm5C_associated_SNPs_120272 3 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:6414890-6414910
64251 chr15 50647720 50647720 1 + C G rs190620523 50647719 + 50647699 50647739 41 GCGGAGAGGCCGGGTGGCCACCGAACCTTCCCGCCTGTTCT GCGGAGAGGCCGGGTGGCCACGGAACCTTCCCGCCTGTTCT < 41bp 0.651063745163314 0.86980173984248 0.6222959 0.8601389 prediction 0.437475989358332 Functional Gain - GABPB1-AS1 ENSG00000244879 ncRNA_exonic Human antisense chr15:50647719 chr15:50647720 . . 0 22 hm5C_associated_SNPs_120275 0 0 11 U2AF2 POSTAR2 GSE83923,CSM2221661 chr15:50647700-50647720
64251 chr19 58724210 58724210 1 + A G STAD 58724207 + 58724187 58724227 41 GCTCTTCCCTCACACAGCATCAGAGAGTTCATTCTGGAGAG GCTCTTCCCTCACACAGCATCAGGGAGTTCATTCTGGAGAG < 41bp 0.591295398345586 0.810031217558973 0.5716061 0.91511583 prediction 0.437471638426775 Functional Gain - ZNF274 ENSG00000171606 CDS Human protein_coding chr19:58724207 chr19:58724210 nonsynonymous SNV 0.993 2 24 hm5C_associated_SNPs_120276 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58724151-58724261
64251 chr1 16091593 16091593 1 + C G rs34375304 16091589 + 16091569 16091609 41 AGGCAGGCAGTTTGTGAGGCCCGGCGTGGCCGCCCCTGGGA AGGCAGGCAGTTTGTGAGGCCCGGGGTGGCCGCCCCTGGGA < 41bp 0.651966922314303 0.870698753645103 0.40724868 0.86830443 prediction 0.4374636626616 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091589 chr1:16091593 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_120279 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:16091580-16091600
64251 chr15 68099074 68099074 1 + C G rs187760642 68099070 + 68099050 68099090 41 GCGCTGGAGGAGAGGCGGAGCCAGCAGGGGCCCCCGTGAGG GCGCTGGAGGAGAGGCGGAGCCAGGAGGGGCCCCCGTGAGG < 41bp 0.435493955106213 0.718729849500486 0.8327216 0.898262 prediction 0.437459699000971 Functional Gain - MAP2K5 ENSG00000137764 CDS Human protein_coding chr15:68099070 chr15:68099074 nonsynonymous SNV 0.984 0 25 hm5C_associated_SNPs_120280 0 0 2 LIN28B POSTAR2 ENCODE chr15:68098995-68099077
64251 chr8 120233876 120233876 1 + T C COAD 120233873 + 120233853 120233893 41 GGTTGCCTCCTCCAATGTTCCTCTACCTCTACTACAAGGAT GGTTGCCTCCTCCAATGTTCCTCCACCTCTACTACAAGGAT < 41bp 0.514293091902172 0.733014391038377 0.07838845 0.102903634 prediction 0.43744259827241 Functional Gain - MAL2 ENSG00000147676 CDS Human protein_coding chr8:120233873 chr8:120233876 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_120281 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:120233839-120233912
64251 chr18 33722273 33722273 1 + T C UCEC 33722271 + 33722251 33722291 41 AAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGA AAGTGCTTTCTCTCTGTGGACACGAGGATTGGATTAGAGGA < 41bp 0.425366674793041 0.718704106182529 0.27126294 0.20821595 prediction 0.437408212365058 Functional Gain - ELP2 ENSG00000134759 CDS Human protein_coding chr18:33722271 chr18:33722273 synonymous SNV . 0 23 hm5C_associated_SNPs_120283 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr18:33722220-33722280
64251 chr2 162227718 162227718 1 + C G LIHC 162227717 + 162227697 162227737 41 TTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTT TTGGTTGGTATCACAGTCACCGTGGCTTTGGTTGTTGGCTT < 41bp 0.408883304173136 0.718682905181415 0.13966504 0.30423856 prediction 0.43736581036283 Functional Gain - PSMD14 ENSG00000115233 CDS Human protein_coding chr2:162227717 chr2:162227718 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120288 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr2:162227680-162227833
64251 chr22 38204130 38204130 1 + C T rs138025366 38204129 + 38204109 38204149 41 GAGTGAGCGGGTCATCACGTCCCGTCAGGGGCCGCACATCC GAGTGAGCGGGTCATCACGTCTCGTCAGGGGCCGCACATCC < 41bp 0.47794305071393 0.718676796745265 0.25562453 0.26513758 prediction 0.437353593490529 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38204129 chr22:38204130 synonymous SNV . 0 22 hm5C_associated_SNPs_120291 0 0 2 DDX3X POSTAR2 ENCODE chr22:38204079-38204169
64251 chr14 57858196 57858196 1 + A G rs199959202 57858193 + 57858173 57858213 41 CAATGGACTGGCCGAGGGCACCGAGCAGGAGGAGGAGGAGG CAATGGACTGGCCGAGGGCACCGGGCAGGAGGAGGAGGAGG < 41bp 0.578794223997774 0.797470565904185 0.47881705 0.86964357 prediction 0.437352683812822 Functional Gain - NAA30 ENSG00000139977 CDS Human protein_coding chr14:57858193 chr14:57858196 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_120292 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:57858174-57858204
64251 chr13 113473658 113473658 1 + A G OV 113473655 + 113473635 113473675 41 GGACACCAAAGGCTTCCACACAGAGGAGGATATCGGCGGAC GGACACCAAAGGCTTCCACACAGGGGAGGATATCGGCGGAC < 41bp 0.597980913889602 0.816654735042353 0.90927994 0.9311091 prediction 0.437347642305501 Functional Gain - ATP11A ENSG00000068650 CDS Human protein_coding chr13:113473655 chr13:113473658 nonsynonymous SNV 0.471 1 24 hm5C_associated_SNPs_120294 0 0 1 GRWD1 POSTAR2 ENCODE chr13:113473647-113473721
64251 chrX 106117053 106117053 1 + A G SKCM 106117050 + 106117030 106117070 41 TTGTTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATTTG TTGTTCCTTTAGGGAGGAACCTCGGTGGTCATTTGCATTTG < 41bp 0.492154788484881 0.718672812137663 0.6919572 0.8512461 prediction 0.437345624275325 Functional Gain - TBC1D8B ENSG00000133138 CDS Human protein_coding chrX:106117050 chrX:106117053 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_120295 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chrX:106117052-106117075
64251 chr11 63668467 63668467 1 + C T LUAD 63668466 + 63668446 63668486 41 GGTTATACACGGGAAGAGATCCAGGACTCGCTGGTGGGCCA GGTTATACACGGGAAGAGATCTAGGACTCGCTGGTGGGCCA < 41bp 0.591362794315657 0.810031629910845 0.84204143 0.65502524 prediction 0.437337671190377 Functional Gain - MARK2 ENSG00000072518 CDS Human protein_coding chr11:63668466 chr11:63668467 stopgain 0.998 0 22 hm5C_associated_SNPs_120297 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:63668462-63668492
64251 chr19 36431228 36431228 1 + C T UCEC 36431227 + 36431207 36431247 41 GAGCCGCCCGTGGTGACTCACCGCTCACCACCTCTGGCTGT GAGCCGCCCGTGGTGACTCACTGCTCACCACCTCTGGCTGT < 41bp 0.485340696739809 0.718664212275476 0.19562757 0.09879759 prediction 0.437328424550952 Functional Gain - LRFN3 ENSG00000126243 CDS Human protein_coding chr19:36431227 chr19:36431228 nonsynonymous SNV 0.973 3 22 hm5C_associated_SNPs_120299 0 0 1 RBM15 POSTAR2 ENCODE chr19:36431190-36431247
64251 chr20 62631108 62631108 1 + C T SKCM 62631107 + 62631087 62631127 41 TGAAGGGGACGGAGATGTGCCCCAAGGTGAGGTATTTCCTG TGAAGGGGACGGAGATGTGCCTCAAGGTGAGGTATTTCCTG < 41bp 0.46024010938735 0.718662537847477 0.32603848 0.80023664 prediction 0.437325075694954 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62631107 chr20:62631108 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_120300 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:62631088-62631112
64251 chr17 40460264 40460264 1 + C T UCEC 40460263 + 40460243 40460283 41 TCCATCAGGTCCCTGGCTGACCGGCTGGGGGACCTGAGCTA TCCATCAGGTCCCTGGCTGACTGGCTGGGGGACCTGAGCTA < 41bp 0.462977269541486 0.718656729256378 0.7471975 0.7777748 prediction 0.437313458512757 Functional Gain - STAT5A ENSG00000126561 CDS Human protein_coding chr17:40460263 chr17:40460264 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_120303 0 0 3 CELF2 POSTAR2 GSE71264,GSM1831626 chr17:40460260-40460300
64251 chr9 35658795 35658795 1 + C T rs553528072 35658794 + 35658774 35658814 41 GGCGTGGGGATCCCCTGAGCCCGAATCTCCCATGGGGGTGC GGCGTGGGGATCCCCTGAGCCTGAATCTCCCATGGGGGTGC < 41bp 0.526239246117953 0.74489346600015 0.21527359 0.43051332 prediction 0.437308439764392 Functional Gain - CCDC107 ENSG00000159884 intronic Human protein_coding chr9:35658794 chr9:35658795 . . 0 22 hm5C_associated_SNPs_120308 0 0 1 PRPF8 POSTAR2 ENCODE chr9:35658720-35658819
64251 chr12 54394196 54394196 1 + T C LAML 54394194 + 54394174 54394214 41 CCCGTGCCCTCTCAGTCGTCCGTGGTATATCACCCGTACGG CCCGTGCCCTCTCAGTCGTCCGCGGTATATCACCCGTACGG < 41bp 0.571930759477965 0.790579873666453 0.88890505 0.91545224 prediction 0.437298228376976 Functional Gain - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54394194 chr12:54394196 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_120309 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:54394180-54394220
64251 chr19 30313407 30313407 1 + T C LUAD 30313405 + 30313385 30313425 41 AAGTGGATGGTTCCATTTGCCATGGTTATAAGGGAGACGGG AAGTGGATGGTTCCATTTGCCACGGTTATAAGGGAGACGGG < 41bp 0.632360892751825 0.851002119580671 0.2955925 0.3146819 prediction 0.437282453657692 Functional Gain - CCNE1 ENSG00000105173 CDS Human protein_coding chr19:30313405 chr19:30313407 nonsynonymous SNV 0.796 1 23 hm5C_associated_SNPs_120316 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:30313407-30313408
64251 chr21 34636112 34636112 1 + A G rs142225927 34636109 + 34636089 34636129 41 TACCAGGGAGCAGGGTTCCCCACAGTTTCAGAGGTGGTCCA TACCAGGGAGCAGGGTTCCCCACGGTTTCAGAGGTGGTCCA < 41bp 0.557502208933832 0.776126640599373 0.09119761 0.5897919 prediction 0.437248863331083 Functional Gain - IFNAR2 ENSG00000159110 UTR3 Human protein_coding chr21:34636109 chr21:34636112 . . 0 24 hm5C_associated_SNPs_120328 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:34636086-34636113
64251 chr1 44447081 44447081 1 + C T SKCM 44447080 + 44447060 44447100 41 CTCCGGGCTCCCTGAGGTCCCCAGTGCCCTGCCCGGTCCCA CTCCGGGCTCCCTGAGGTCCCTAGTGCCCTGCCCGGTCCCA < 41bp 0.557019257613388 0.775642852218453 0.3129411 0.31829032 prediction 0.43724718921013 Functional Gain - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44447080 chr1:44447081 nonsynonymous SNV 0.975 0 22 hm5C_associated_SNPs_120329 0 0 2 DDX55 POSTAR2 ENCODE chr1:44447048-44447111
64251 chr9 139311596 139311596 1 + C T UCEC 139311595 + 139311575 139311615 41 AGTACCTCCTGGGGGTCCAGCCGGCCTGGGGGAGCGCAGAG AGTACCTCCTGGGGGTCCAGCTGGCCTGGGGGAGCGCAGAG < 41bp 0.525414494793984 0.744031296831144 0.84596455 0.63151395 prediction 0.43723360407432 Functional Gain - PMPCA ENSG00000165688 CDS Human protein_coding chr9:139311595 chr9:139311596 nonsynonymous SNV 0.696 3 22 hm5C_associated_SNPs_120332 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139311573-139311622
64251 chr1 40703620 40703620 1 + A G UCEC 40703617 + 40703597 40703637 41 TCAATAACACATGGATCTTTCTCAGGGTCATTGCAGGGGTA TCAATAACACATGGATCTTTCTCGGGGTCATTGCAGGGGTA < 41bp 0.529040704474005 0.747653575966915 0.08579993 0.260569 prediction 0.43722574298582 Functional Gain - RLF ENSG00000117000 CDS Human protein_coding chr1:40703617 chr1:40703620 synonymous SNV . 0 24 hm5C_associated_SNPs_120333 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:40703580-40703620
64251 chr9 138011933 138011933 1 + C A THYM 138011932 + 138011912 138011952 41 TCTCCATGCTGGACTACAACCCCAAGGACCGGGCCCTGTAT TCTCCATGCTGGACTACAACCACAAGGACCGGGCCCTGTAT < 41bp 0.613101118609605 0.831711660816901 0.06668341 0.23980138 prediction 0.437221084414592 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011932 chr9:138011933 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120335 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138011845-138011948
64251 chr10 49634432 49634432 1 + C G UCEC 49634428 + 49634408 49634448 41 CCATTATGTTTGCAGCCAGTCAGGCAAGGGATTTGTTATCC CCATTATGTTTGCAGCCAGTCAGGGAAGGGATTTGTTATCC < 41bp 0.435489028245018 0.718605633755692 0.3896385 0.87131345 prediction 0.437211267511384 Functional Gain - MAPK8 ENSG00000107643 CDS Human protein_coding chr10:49634428 chr10:49634432 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_120338 0 0 1 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:49634428-49634454
64251 chr1 147096166 147096166 1 + C T STAD 147096165 + 147096145 147096185 41 GGTCATCCGACCTGGAGCCACCGGAATACCTGAGTTTGATC GGTCATCCGACCTGGAGCCACTGGAATACCTGAGTTTGATC < 41bp 0.462826337255492 0.718602943015407 0.29690713 0.3250544 prediction 0.437205886030813 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147096165 chr1:147096166 synonymous SNV . 0 22 hm5C_associated_SNPs_120340 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:147096151-147096182
64251 chr9 96411492 96411492 1 + C A SARC 96411491 + 96411471 96411511 41 CAACCTCGAGTTCTCTGACACCCGGTGAGTGCTACCACCCT CAACCTCGAGTTCTCTGACACACGGTGAGTGCTACCACCCT < 41bp 0.456517559170471 0.718573542279714 0.17324805 0.22555295 prediction 0.437147084559428 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96411491 chr9:96411492 synonymous SNV . 0 22 hm5C_associated_SNPs_120350 0 0 1 YBX3 POSTAR2 ENCODE chr9:96411432-96411495
64251 chr10 292775 292775 1 + T C UCEC 292772 + 292752 292792 41 CATCGGCTGCACGTGAAGCGCAGTATGGGTTGGAAAAAGGC CATCGGCTGCACGTGAAGCGCAGCATGGGTTGGAAAAAGGC < 41bp 0.526901737975785 0.74547302292358 0.073180735 0.033279896 prediction 0.43714256989559 Functional Gain - ZMYND11 ENSG00000015171 CDS Human protein_coding chr10:292772 chr10:292775 synonymous SNV . 0 24 hm5C_associated_SNPs_120352 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:292775-292776
64251 chr5 149212460 149212460 1 + C A STAD 149212459 + 149212439 149212479 41 TAGCTCTGGGCAGGGCAGACCCCGGTGCCCCGGTTTCCCAG TAGCTCTGGGCAGGGCAGACCACGGTGCCCCGGTTTCCCAG < 41bp 0.458143771393099 0.718564471018534 0.903375 0.9144376 prediction 0.437128942037068 Functional Gain - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149212459 chr5:149212460 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_120355 0 0 2 BUD13 POSTAR2 ENCODE chr5:149212432-149212487
64251 chr1 150917540 150917540 1 + C T ESCA 150917539 + 150917519 150917559 41 GAAGGCACGTGGTGGAAGTCCCGAGTTGAGGAGGTGGATGG GAAGGCACGTGGTGGAAGTCCTGAGTTGAGGAGGTGGATGG < 41bp 0.588422004813441 0.806977828628553 0.19065982 0.19092318 prediction 0.437111647630223 Functional Gain - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150917539 chr1:150917540 stopgain 0.998 1 22 hm5C_associated_SNPs_120364 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:150917504-150917540
64251 chr11 9537837 9537837 1 + T C LIHC 9537835 + 9537815 9537855 41 CGCCCATCACAGTCCCCGCCCATGATGCAGTCATCTCCTCA CGCCCATCACAGTCCCCGCCCACGATGCAGTCATCTCCTCA < 41bp 0.642738209043101 0.861289515076492 0.07600713 0.062595785 prediction 0.437102612066782 Functional Gain - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9537835 chr11:9537837 synonymous SNV . 0 23 hm5C_associated_SNPs_120367 0 0 1 FMR1 POSTAR2 ENCODE chr11:9537792-9537910
64251 chr13 37393714 37393714 1 + C A UCEC 37393713 + 37393693 37393733 41 GCGGGCAAGCCCGTTAGGTACCTGTGCGAAGGGGCCGGGGA GCGGGCAAGCCCGTTAGGTACATGTGCGAAGGGGCCGGGGA < 41bp 0.59374479491483 0.812294570088136 0.045811832 0.20718154 prediction 0.437099550346611 Functional Gain - RFXAP ENSG00000133111 CDS Human protein_coding chr13:37393713 chr13:37393714 nonsynonymous SNV 0.095 0 22 hm5C_associated_SNPs_120369 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr13:37393700-37393720
64251 chr5 122425877 122425877 1 + C G rs537520863 122425876 + 122425856 122425896 41 TCTTCAGCCGCCGCCGCCGCCCCCGCCCCCGGAGCGCGCTG TCTTCAGCCGCCGCCGCCGCCGCCGCCCCCGGAGCGCGCTG < 41bp 0.664709753191393 0.883259283259305 0.24559325 0.48704264 prediction 0.437099060135824 Functional Gain - PRDM6 ENSG00000061455 CDS Human protein_coding chr5:122425876 chr5:122425877 synonymous SNV . 0 22 hm5C_associated_SNPs_120370 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:122425876-122425877
64251 chr3 147128689 147128689 1 + C A LUSC 147128688 + 147128668 147128708 41 ACCGTGGAGCACGTAGGTGGCCCGGAGCAGAGTAATCACAT ACCGTGGAGCACGTAGGTGGCACGGAGCAGAGTAATCACAT < 41bp 0.604330973319224 0.82287775820115 0.26280355 0.29059964 prediction 0.437093569763853 Functional Gain - ZIC1 ENSG00000152977 CDS Human protein_coding chr3:147128688 chr3:147128689 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_120372 0 0 1 CNBP POSTAR2 GSE76193,GSM1976310 chr3:147128680-147128700
64251 chrX 48559061 48559061 1 + C T SARC 48559060 + 48559040 48559080 41 CGATATGACCTCTGCATCTTCCGCACGGATGATGGGCGTGG CGATATGACCTCTGCATCTTCTGCACGGATGATGGGCGTGG < 41bp 0.45667205489693 0.718545493753997 0.11707878 0.18267366 prediction 0.437090987507995 Functional Gain - SUV39H1 ENSG00000101945 CDS Human protein_coding chrX:48559060 chrX:48559061 nonsynonymous SNV 0.940 5 22 hm5C_associated_SNPs_120373 0 0 5 FXR2 POSTAR2 GSE39682,GSM977620 chrX:48559041-48559062
64251 chr20 11899126 11899126 1 + C T STAD 11899125 + 11899105 11899145 41 AGATGGCTGCTGATATATTCCCCCGTAAAAAGCCAGCCAAC AGATGGCTGCTGATATATTCCTCCGTAAAAAGCCAGCCAAC < 41bp 0.459810913113072 0.718522242639721 0.21067002 0.18142587 prediction 0.437044485279442 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11899125 chr20:11899126 nonsynonymous SNV 0.873 2 22 hm5C_associated_SNPs_120379 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr20:11899106-11899129
64251 chr11 6977625 6977625 1 + C T LGG 6977624 + 6977604 6977644 41 AACTGTGGAAAATCCTTCAACCGGAGCTCCTCTCTTATTCG AACTGTGGAAAATCCTTCAACTGGAGCTCCTCTCTTATTCG < 41bp 0.559152048235814 0.777673061524037 0.6087727 0.16079685 prediction 0.437042026576447 Functional Gain - ZNF215 ENSG00000149054 CDS Human protein_coding chr11:6977624 chr11:6977625 nonsynonymous SNV 0.558 2 22 hm5C_associated_SNPs_120380 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr11:6977601-6977625
64251 chr19 56200241 56200241 1 + T C STAD 56200239 + 56200219 56200259 41 TCTCACCCGCCCTCCAGCCTCATCAGCAGCTGTGGGCTCAG TCTCACCCGCCCTCCAGCCTCACCAGCAGCTGTGGGCTCAG < 41bp 0.612638603342385 0.831136058575019 0.21492359 0.3365121 prediction 0.436994910465267 Functional Gain - EPN1 ENSG00000063245 CDS Human protein_coding chr19:56200239 chr19:56200241 nonsynonymous SNV 0.921 2 23 hm5C_associated_SNPs_120389 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:56200236-56200260
64251 chr3 129225260 129225260 1 + A G UCEC 129225257 + 129225237 129225277 41 CCACCACTCCTACAGCGTTCCACAAGGCTGGGCGACAGAGA CCACCACTCCTACAGCGTTCCACGAGGCTGGGCGACAGAGA < 41bp 0.524726054809011 0.743215123509408 0.25218424 0.23955241 prediction 0.436978137400795 Functional Gain - IFT122 ENSG00000163913 CDS Human protein_coding chr3:129225257 chr3:129225260 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_120393 0 0 1 SF3B4 POSTAR2 ENCODE chr3:129225183-129225299
64251 chr17 71232647 71232647 1 + A G rs75405928 71232644 + 71232624 71232664 41 TTCAACACCAGGGATTCAGTCACAGGAAAGGAGTCTCAAGG TTCAACACCAGGGATTCAGTCACGGGAAAGGAGTCTCAAGG < 41bp 0.580780218371399 0.799255355762401 0.15748033 0.48360106 prediction 0.436950274782004 Functional Gain - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232644 chr17:71232647 synonymous SNV . 0 24 hm5C_associated_SNPs_120399 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:71232637-71232657
64251 chr16 69184787 69184787 1 + C T SKCM 69184786 + 69184766 69184806 41 AAGAATTACGATGCCGCTCTCCGAAAAATCACCTTTCCCCA AAGAATTACGATGCCGCTCTCTGAAAAATCACCTTTCCCCA < 41bp 0.453686729104948 0.718472686400695 0.30833086 0.06846538 prediction 0.43694537280139 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184786 chr16:69184787 stopgain 0.999 1 22 hm5C_associated_SNPs_120400 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:69184768-69184789
64251 chr17 37815004 37815004 1 + C T UCEC 37815003 + 37814983 37815023 41 GCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTC GCCGCCCAGGTTGCTGTTGCCTGTGGACCCCTGCTGTTCTC < 41bp 0.580988509124769 0.799458837323927 0.0326142 0.0060105026 prediction 0.436940656398316 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37815003 chr17:37815004 nonsynonymous SNV 0.901 2 22 hm5C_associated_SNPs_120401 0 0 5 BUD13 POSTAR2 ENCODE chr17:37814965-37815032
64251 chr19 46021024 46021024 1 + C A LUSC 46021023 + 46021003 46021043 41 CCCCAGGCCTTCAGCCGCGTCCAGATCTACCACAACCCCAC CCCCAGGCCTTCAGCCGCGTCAAGATCTACCACAACCCCAC < 41bp 0.610431691845522 0.828901344566543 0.37252057 0.26281032 prediction 0.436939305442043 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46021023 chr19:46021024 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_120402 0 0 1 YBX3 POSTAR2 ENCODE chr19:46021011-46021044
64251 chr21 35201967 35201967 1 + C T SKCM 35201966 + 35201946 35201986 41 CCTCATACACCGCCACCGGCCCCGAGCAGCTCACTCTCGCC CCTCATACACCGCCACCGGCCTCGAGCAGCTCACTCTCGCC < 41bp 0.567399991299418 0.785864569916994 0.27284354 0.48969218 prediction 0.436929157235153 Functional Gain - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35201966 chr21:35201967 nonsynonymous SNV 0.989 3 22 hm5C_associated_SNPs_120409 0 0 1 PPIG POSTAR2 ENCODE chr21:35201947-35202053
64251 chrX 152612966 152612966 1 + C T SKCM 152612965 + 152612945 152612985 41 GACGACTGCGGCAAGTCCTTCCGAGGGGTCAACGGGCTGGC GACGACTGCGGCAAGTCCTTCTGAGGGGTCAACGGGCTGGC < 41bp 0.481912389373623 0.718463556422803 0.60424554 0.23795506 prediction 0.436927112845606 Functional Gain - ZNF275 ENSG00000063587 CDS Human protein_coding chrX:152612965 chrX:152612966 stopgain 0.988 0 22 hm5C_associated_SNPs_120411 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:152612945-152612989
64251 chr10 135123764 135123764 1 + C T HNSC 135123763 + 135123743 135123783 41 CACCTGTACCCCGCGGACTTCCGGTTTGATAAGCCAAAGAA CACCTGTACCCCGCGGACTTCTGGTTTGATAAGCCAAAGAA < 41bp 0.456340114396163 0.718460002646166 0.6168735 0.49564153 prediction 0.436920005292332 Functional Gain - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135123763 chr10:135123764 nonsynonymous SNV 0.913 5 22 hm5C_associated_SNPs_120412 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:135123678-135123770
64251 chr19 14675931 14675931 1 + C T COAD 14675930 + 14675910 14675950 41 GGCCCTGCGGGACCTGCGGCCCGCTGGTGAGTGCCTGCTGG GGCCCTGCGGGACCTGCGGCCTGCTGGTGAGTGCCTGCTGG < 41bp 0.570215249468669 0.788660441640403 0.24066857 0.1966371 prediction 0.436890384343469 Functional Gain - TECR ENSG00000099797 CDS Human protein_coding chr19:14675930 chr19:14675931 synonymous SNV . 0 22 hm5C_associated_SNPs_120417 0 0 5 EFTUD2 POSTAR2 ENCODE chr19:14675922-14676000
64251 chr1 101491514 101491514 1 + C G rs61742627 101491513 + 101491493 101491533 41 GGCGGCGAAAGGTCAGTCGGCCGAGAGGAGTCCGTGGAGCC GGCGGCGAAAGGTCAGTCGGCGGAGAGGAGTCCGTGGAGCC < 41bp 0.416551777098446 0.718435273038554 0.70574784 0.8321996 prediction 0.436870546077108 Functional Gain - LOC102606465 ENSG00000233184 ncRNA_exonic Human antisense chr1:101491513 chr1:101491514 . . 0 22 hm5C_associated_SNPs_120422 0 0 3 DDX3X POSTAR2 ENCODE chr1:101491473-101491562
64251 chr9 91077457 91077457 1 + C T UCEC 91077456 + 91077436 91077476 41 AGCAAACCTGTTTCCCAGCCCCGGCGGAACATCGTAGGCTG AGCAAACCTGTTTCCCAGCCCTGGCGGAACATCGTAGGCTG < 41bp 0.464538340946428 0.718434055042191 0.33901966 0.211806 prediction 0.436868110084381 Functional Gain - SPIN1 ENSG00000106723 CDS Human protein_coding chr9:91077456 chr9:91077457 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_120423 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:91077420-91077463
64251 chr21 35183432 35183432 1 + C T SKCM 35183431 + 35183411 35183451 41 GATTCAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGA GATTCAACATCTGCCCCTGCCTCCAAACTGGCCTTGCGTGA < 41bp 0.556280079934077 0.774712375541114 0.07103294 0.9689252 prediction 0.436864591214073 Functional Gain - ITSN1 ENSG00000205726 CDS Human protein_coding chr21:35183431 chr21:35183432 nonsynonymous SNV 0.877 3 22 hm5C_associated_SNPs_120425 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221660 chr21:35183432-35183433
64251 chr4 154523748 154523748 1 + C T UCEC 154523747 + 154523727 154523767 41 TCGGGACCTAAGTCTTGTAACCGCAGCGGACCTAGAATTTC TCGGGACCTAAGTCTTGTAACTGCAGCGGACCTAGAATTTC < 41bp 0.454285774370824 0.718431473682546 0.2652884 0.24076274 prediction 0.436862947365091 Functional Gain - TMEM131L ENSG00000121210 CDS Human protein_coding chr4:154523747 chr4:154523748 synonymous SNV . 0 22 hm5C_associated_SNPs_120426 0 0 1 ZNF622 POSTAR2 ENCODE chr4:154523736-154523780
64251 chr16 88872998 88872998 1 + C T UCEC 88872997 + 88872977 88873017 41 AGTACCCGACATCGAGCCGGCCGCGCTGCCCCAGCCACCCG AGTACCCGACATCGAGCCGGCTGCGCTGCCCCAGCCACCCG < 41bp 0.467923155485416 0.718427715329281 0.16218033 0.16332865 prediction 0.436855430658563 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88872997 chr16:88872998 synonymous SNV . 0 22 hm5C_associated_SNPs_120428 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:88872986-88873010
64251 chr16 57503194 57503194 1 + C T STAD 57503193 + 57503173 57503213 41 GACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTCAGTGC GACCTCATCTCCAACAGCCCCTGGGTCATTCCGGTCAGTGC < 41bp 0.590953264649254 0.809366731579086 0.2490035 0.09097028 prediction 0.436826933859665 Functional Gain - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57503193 chr16:57503194 nonsynonymous SNV 0.798 4 22 hm5C_associated_SNPs_120431 0 0 4 GRWD1 POSTAR2 ENCODE chr16:57503164-57503209
64251 chr19 17837975 17837975 1 + C A rs536023599 17837974 + 17837954 17837994 41 ATGTGGAGAAGCCAGCCCCCCCAGTGCAGCCTGCGGCTCTC ATGTGGAGAAGCCAGCCCCCCAAGTGCAGCCTGCGGCTCTC < 41bp 0.458402505375503 0.718405555806471 0.3016672 0.5162892 prediction 0.436811111612941 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837974 chr19:17837975 synonymous SNV . 0 22 hm5C_associated_SNPs_120433 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:17837974-17837975
64251 chr17 18004845 18004845 1 + T A rs61256737 18004841 + 18004821 18004861 41 GAAGTGCTTTTCCGAGAAGACTGCTCCCCGGACGAGTTCAT GAAGTGCTTTTCCGAGAAGACTGCACCCCGGACGAGTTCAT < 41bp 0.365473491049987 0.718403784656588 0.06813398 0.08945039 prediction 0.436807569313175 Functional Gain - DRG2 ENSG00000108591 CDS Human protein_coding chr17:18004841 chr17:18004845 nonsynonymous SNV 0.961 1 25 hm5C_associated_SNPs_120435 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:18004843-18004863
64251 chr3 52825625 52825625 1 + C T UCEC 52825624 + 52825604 52825644 41 GCCACGATGGTGGTGAGGAACCGCCGGCTCACGGTCACCAG GCCACGATGGTGGTGAGGAACTGCCGGCTCACGGTCACCAG < 41bp 0.582201734157584 0.800592054827787 0.40999258 0.48933348 prediction 0.436780641340405 Functional Gain - ITIH1 ENSG00000055957 CDS Human protein_coding chr3:52825624 chr3:52825625 nonsynonymous SNV 0.028 2 22 hm5C_associated_SNPs_120436 0 0 1 PPIG POSTAR2 ENCODE chr3:52825555-52825647
64251 chr7 98990335 98990335 1 + C T rs530272604 98990334 + 98990314 98990354 41 GCTGTTCACCTATGACGCCGCCGCGGGGATGCTGAGCTTCG GCTGTTCACCTATGACGCCGCTGCGGGGATGCTGAGCTTCG < 41bp 0.477823213771113 0.71838481669679 0.31369168 0.21611863 prediction 0.43676963339358 Functional Gain - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98990334 chr7:98990335 synonymous SNV . 0 22 hm5C_associated_SNPs_120439 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr7:98990300-98990344
64251 chr5 145610355 145610355 1 + T C KIRC 145610352 + 145610332 145610372 41 GTCTATTCCCAGCACTGTTACTGTGATCGCACCTGCTCACC GTCTATTCCCAGCACTGTTACTGCGATCGCACCTGCTCACC < 41bp 0.499541130571498 0.718383228584176 0.24250296 0.21221882 prediction 0.436766457168352 Functional Gain - RBM27 ENSG00000091009 CDS Human protein_coding chr5:145610352 chr5:145610355 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_120440 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:145610304-145610378
64251 chr7 114298229 114298229 1 + C T SKCM 114298228 + 114298208 114298248 41 GCCCCAGTCACCCCGATTACCCAGGGACCCTCAGTAATCAC GCCCCAGTCACCCCGATTACCTAGGGACCCTCAGTAATCAC < 41bp 0.534401660152558 0.752779248254658 0.8070437 0.101178825 prediction 0.436755176204201 Functional Gain - FOXP2 ENSG00000128573 CDS Human protein_coding chr7:114298228 chr7:114298229 stopgain 1.000 1 22 hm5C_associated_SNPs_120443 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr7:114298220-114298240
64251 chr9 390512 390512 1 + C A rs2297075 390511 + 390491 390531 41 CCTTCAGATGGTGGTCAGCACCGGAATGGTGAGAGAAACAG CCTTCAGATGGTGGTCAGCACAGGAATGGTGAGAGAAACAG < 41bp 0.477257273677326 0.718372637772492 0.25746244 0.35639474 prediction 0.436745275544983 Functional Gain - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:390511 chr9:390512 synonymous SNV . 0 22 hm5C_associated_SNPs_120444 0 0 1 DDX24 POSTAR2 ENCODE chr9:390483-390537
64251 chr13 41636806 41636806 1 + A G LUAD 41636803 + 41636783 41636823 41 GGACTACTGGAAGTCACAGCCAAAGAAATTCTGTGATTACT GGACTACTGGAAGTCACAGCCAAGGAAATTCTGTGATTACT < 41bp 0.523513348073485 0.74188429920791 0.3698166 0.72944164 prediction 0.436741902268849 Functional Gain - WBP4 ENSG00000120688 CDS Human protein_coding chr13:41636803 chr13:41636806 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_120445 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:41636793-41636820
64251 chr9 130566579 130566579 1 + C A UCEC 130566575 + 130566555 130566595 41 GGTTGCCAGGATGCCGTGCGCATGCTCAATACCCTGCAGAC GGTTGCCAGGATGCCGTGCGCATGATCAATACCCTGCAGAC < 41bp 0.314333516814027 0.718357928402272 0.1095964 0.39044896 prediction 0.436715856804544 Functional Gain - FPGS ENSG00000136877 CDS Human protein_coding chr9:130566575 chr9:130566579 nonsynonymous SNV 0.953 4 25 hm5C_associated_SNPs_120452 0 0 1 DDX3X POSTAR2 ENCODE chr9:130566563-130566579
64251 chr11 57505440 57505440 1 + A G LGG 57505437 + 57505417 57505457 41 ATGTTTAGTAAAGTGGCCAACACAATTCTTTTCTTCCGCTT ATGTTTAGTAAAGTGGCCAACACGATTCTTTTCTTCCGCTT < 41bp 0.489026737129748 0.718354098564081 0.26982015 0.14138585 prediction 0.436708197128161 Functional Gain - TMX2 ENSG00000213593 CDS Human protein_coding chr11:57505437 chr11:57505440 synonymous SNV . 0 24 hm5C_associated_SNPs_120453 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr11:57505420-57505453
64251 chr20 43566787 43566787 1 + A G rs11780 43566784 + 43566764 43566804 41 ATGCTGCTGGAGATTGACAACTCAGAGCTGTTGCTCATGCT ATGCTGCTGGAGATTGACAACTCGGAGCTGTTGCTCATGCT < 41bp 0.569912898586772 0.788265057453112 0.2643053 0.25442892 prediction 0.436704317732679 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43566784 chr20:43566787 nonsynonymous SNV 0.949 1 24 hm5C_associated_SNPs_120455 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:43566755-43566794
64251 chr5 34934001 34934001 1 + A G CESC 34933998 + 34933978 34934018 41 ATATGATGTGTTGAGTGACCCTCAGGAAAGAGCATGGTGAG ATATGATGTGTTGAGTGACCCTCGGGAAAGAGCATGGTGAG < 41bp 0.54268717712535 0.761037799340213 0.004006326 0.034729034 prediction 0.436701244429727 Functional Gain - DNAJC21 ENSG00000168724 CDS Human protein_coding chr5:34933998 chr5:34934001 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_120456 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:34933966-34934004
64251 chr1 203840037 203840037 1 + C A rs4598553 203840036 + 203840016 203840056 41 GCCTTAAGTTCTGCTAAAGGCCATGTTGTTATTAAGGACGG GCCTTAAGTTCTGCTAAAGGCAATGTTGTTATTAAGGACGG < 41bp 0.555958205846309 0.774307299691547 0.036349475 0.1381714 prediction 0.436698187690476 Functional Gain - SNRPE ENSG00000182004 downstream Human protein_coding chr1:203840036 chr1:203840037 . . 0 22 hm5C_associated_SNPs_120457 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:203840020-203840043
64251 chr1 63998406 63998406 1 + T A LUAD 63998402 + 63998382 63998422 41 AAATTTGGCTGATGTAAATGCTGATGGCAAATTTGACTACA AAATTTGGCTGATGTAAATGCTGAAGGCAAATTTGACTACA < 41bp 0.392306629397287 0.718343231408263 0.16566321 0.16523683 prediction 0.436686462816526 Functional Gain - EFCAB7 ENSG00000203965 CDS Human protein_coding chr1:63998402 chr1:63998406 nonsynonymous SNV 0.996 2 25 hm5C_associated_SNPs_120462 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:63998383-63998416
64251 chr4 83970343 83970343 1 + T C UCEC 83970341 + 83970321 83970361 41 GTAAATGAGAATGTCAGTCTCGTGATCTCGCGGCAGTTGCT GTAAATGAGAATGTCAGTCTCGCGATCTCGCGGCAGTTGCT < 41bp 0.641516171761828 0.859858740698776 0.874681 0.9001745 prediction 0.436685137873897 Functional Gain - COPS4 ENSG00000138663 CDS Human protein_coding chr4:83970341 chr4:83970343 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_120463 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr4:83970325-83970365
64251 chr1 32655677 32655677 1 + C T UCEC 32655676 + 32655656 32655696 41 GAAGAAGGTGTGCAGCGGGCCCGGGAGGAGGAGGAGAAGCG GAAGAAGGTGTGCAGCGGGCCTGGGAGGAGGAGGAGAAGCG < 41bp 0.543841482709633 0.762180466713302 0.41600132 0.62053025 prediction 0.436677968007339 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32655676 chr1:32655677 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_120467 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32655657-32655692
64251 chr8 11687925 11687925 1 + C T HNSC 11687924 + 11687904 11687944 41 TGTTTAACTTCTGTGCTATTCCACAGGTAGGGAAGGGGGCT TGTTTAACTTCTGTGCTATTCTACAGGTAGGGAAGGGGGCT < 41bp 0.595113125572344 0.813443920586524 0.13346681 0.42128617 prediction 0.43666159002836 Functional Gain - FDFT1 ENSG00000079459 CDS Human protein_coding chr8:11687924 chr8:11687925 nonsynonymous SNV 0.984 5 22 hm5C_associated_SNPs_120468 0 0 11 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr8:11687905-11687930
64251 chr19 38755319 38755319 1 + C G rs372472022 38755315 + 38755295 38755335 41 GCGAGGGCGCGAGTGAGGAGCAGACCCAGGCATCGCGCGCC GCGAGGGCGCGAGTGAGGAGCAGAGCCAGGCATCGCGCGCC < 41bp 0.619906159793451 0.838231785735426 0.8025403 0.88870233 prediction 0.436651251883951 Functional Gain - SPINT2 ENSG00000167642 UTR5 Human protein_coding chr19:38755315 chr19:38755319 . . 0 25 hm5C_associated_SNPs_120471 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:38755120-38755340
64251 chr3 44684893 44684893 1 + C T SKCM 44684892 + 44684872 44684912 41 TGTACATCGGAGAATCCACACCGGAGAAAAACCCTTTGAAT TGTACATCGGAGAATCCACACTGGAGAAAAACCCTTTGAAT < 41bp 0.555003184747862 0.77332875278416 0.63282806 0.25439742 prediction 0.436651136072595 Functional Gain - ZNF197;ZNF660-ZNF197 ENSG00000186448 CDS Human protein_coding chr3:44684892 chr3:44684893 synonymous SNV . 0 22 hm5C_associated_SNPs_120472 0 0 2 UCHL5 POSTAR2 ENCODE chr3:44684862-44684936
64251 chr4 146460985 146460985 1 + A G UCEC 146460982 + 146460962 146461002 41 CTCCTGTGCTGGTTCCAAGACACAGCGAATATAATCCTCAG CTCCTGTGCTGGTTCCAAGACACGGCGAATATAATCCTCAG < 41bp 0.484802419162065 0.718321116474653 0.02152428 0.042832077 prediction 0.436642232949306 Functional Gain - SMAD1 ENSG00000170365 CDS Human protein_coding chr4:146460982 chr4:146460985 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_120476 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:146460958-146460996
64251 chr6 126661295 126661295 1 + A G rs367748361 126661292 + 126661272 126661312 41 GGCGGATTCGAACGTTCGGACTGAGGTTTTTCTGCCTGAAG GGCGGATTCGAACGTTCGGACTGGGGTTTTTCTGCCTGAAG < 41bp 0.537129698861522 0.755450041114369 0.19113886 0.35748664 prediction 0.436640684505693 Functional Gain - CENPW ENSG00000203760 upstream Human protein_coding chr6:126661292 chr6:126661295 . . 0 24 hm5C_associated_SNPs_120477 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:126661272-126661330
64251 chr19 39215191 39215191 1 + C T SKCM 39215190 + 39215170 39215210 41 AATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGTGAG AATGTTGTGGGGCCCTGGATCTAGACCAAGATGGAGGTGAG < 41bp 0.603181402228646 0.821497929650124 0.7342876 0.68200624 prediction 0.436633054842955 Functional Gain - ACTN4 ENSG00000130402 CDS Human protein_coding chr19:39215190 chr19:39215191 stopgain 1.000 1 22 hm5C_associated_SNPs_120478 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:39215170-39215196
64251 chr20 39751854 39751854 1 + C T SKCM 39751853 + 39751833 39751873 41 AGGTGCAAGAAGTGGGGTGTCCCAATTGAGAAGATTTACAA AGGTGCAAGAAGTGGGGTGTCTCAATTGAGAAGATTTACAA < 41bp 0.602919842009436 0.82121554898271 0.1809521 0.91961336 prediction 0.436591413946548 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39751853 chr20:39751854 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_120484 0 0 3 GRWD1 POSTAR2 ENCODE chr20:39751835-39751855
64251 chr16 56716420 56716420 1 + T A rs57664183 56716416 + 56716396 56716436 41 CTGTCCCGCTGCGTGTTTTCCTCTTGATCGGGAACTCCTGC CTGTCCCGCTGCGTGTTTTCCTCTAGATCGGGAACTCCTGC < 41bp 0.403035242232387 0.718291808329239 0.09022644 0.88241935 prediction 0.436583616658477 Functional Gain - MT1X ENSG00000259827 ncRNA_exonic Human processed_transcript chr16:56716416 chr16:56716420 . . 0 25 hm5C_associated_SNPs_120485 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819214 chr16:56716380-56716440
64251 chr17 53398087 53398087 1 + C T SKCM 53398086 + 53398066 53398106 41 AGCCAAGCGCTCCCGCGACGCCCGGAGGCTGAAAGAGAACC AGCCAAGCGCTCCCGCGACGCTCGGAGGCTGAAAGAGAACC < 41bp 0.46691417012998 0.718288829131165 0.12016773 0.08350679 prediction 0.43657765826233 Functional Gain - HLF ENSG00000108924 CDS Human protein_coding chr17:53398086 chr17:53398087 synonymous SNV . 0 22 hm5C_associated_SNPs_120486 0 0 1 U2AF2 POSTAR2 ENCODE chr17:53397995-53398108
64251 chr6 83074828 83074828 1 + C T rs139823445 83074827 + 83074807 83074847 41 CTCGGCGCCGTTCCTGGCTTCCGCCGTGTCCGCCCAGCCCC CTCGGCGCCGTTCCTGGCTTCTGCCGTGTCCGCCCAGCCCC < 41bp 0.53796305677198 0.756251594428897 0.04670793 0.07495198 prediction 0.436577075313834 Functional Gain - TPBG ENSG00000146242 CDS Human protein_coding chr6:83074827 chr6:83074828 synonymous SNV . 0 22 hm5C_associated_SNPs_120487 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:83074797-83074835
64251 chr17 78968905 78968905 1 + T C COAD 78968903 + 78968883 78968923 41 CAGATCAGCAGCCTGGAGGCCATGGTAGGCGGCCGGGTGCT CAGATCAGCAGCCTGGAGGCCACGGTAGGCGGCCGGGTGCT < 41bp 0.597502741651275 0.815790261894172 0.5342723 0.49981943 prediction 0.436575040485793 Functional Gain - CHMP6 ENSG00000176108 CDS Human protein_coding chr17:78968903 chr17:78968905 nonsynonymous SNV 0.963 2 23 hm5C_associated_SNPs_120488 0 0 1 PPIG POSTAR2 ENCODE chr17:78968843-78968907
64251 chr9 140446788 140446788 1 + C T SKCM 140446787 + 140446767 140446807 41 CCCTGAGAGCGAGGAGACGCCCCTGACGGCCGCGCAGCTCT CCCTGAGAGCGAGGAGACGCCTCTGACGGCCGCGCAGCTCT < 41bp 0.552178247177066 0.770465637215268 0.08916959 0.15356857 prediction 0.436574780076403 Functional Gain - MRPL41 ENSG00000182154 CDS Human protein_coding chr9:140446787 chr9:140446788 synonymous SNV . 0 22 hm5C_associated_SNPs_120489 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:140446710-140446798
64251 chr17 9549441 9549441 1 + C T rs3744756 9549440 + 9549420 9549460 41 CGAATACACGCCCCAACTTTCCGCGGAGTTCAAGGTAGGCA CGAATACACGCCCCAACTTTCTGCGGAGTTCAAGGTAGGCA < 41bp 0.489265509979065 0.718286205769076 0.84097505 0.49404472 prediction 0.436572411538152 Functional Gain - USP43 ENSG00000154914 CDS Human protein_coding chr17:9549440 chr17:9549441 synonymous SNV . 0 22 hm5C_associated_SNPs_120490 0 0 1 PRPF8 POSTAR2 ENCODE chr17:9549437-9549493
64251 chr1 156105793 156105793 1 + C A COAD 156105792 + 156105772 156105812 41 GGAAAAGGAGCGGGAGATGGCCGAGATGCGGGCAAGGATGC GGAAAAGGAGCGGGAGATGGCAGAGATGCGGGCAAGGATGC < 41bp 0.597746741103731 0.816031818490056 0.61603165 0.89152867 prediction 0.436570154772649 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156105792 chr1:156105793 synonymous SNV . 0 22 hm5C_associated_SNPs_120491 0 0 9 DDX24 POSTAR2 ENCODE chr1:156105787-156105842
64251 chr10 121432031 121432031 1 + C T rs117671123 121432030 + 121432010 121432050 41 CAGGGGGATGACTGGGAGCCCCGGCCCCTGCGGGCGGCATC CAGGGGGATGACTGGGAGCCCTGGCCCCTGCGGGCGGCATC < 41bp 0.477301132207446 0.718271535893601 0.9028703 0.89586806 prediction 0.436543071787201 Functional Gain - BAG3 ENSG00000151929 CDS Human protein_coding chr10:121432030 chr10:121432031 nonsynonymous SNV 0.922 3 22 hm5C_associated_SNPs_120494 6 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:121432013-121432043
64251 chr17 33289281 33289281 1 + T C KIRP 33289279 + 33289259 33289299 41 CAATTGAGAAAGCAGAAATACATGAAAAAGTGGTGGAAAGG CAATTGAGAAAGCAGAAATACACGAAAAAGTGGTGGAAAGG < 41bp 0.617842151951815 0.836110320605183 0.15810475 0.24913275 prediction 0.436536337306735 Functional Gain - ZNF830 ENSG00000198783 CDS Human protein_coding chr17:33289279 chr17:33289281 synonymous SNV . 0 23 hm5C_associated_SNPs_120496 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:33289280-33289281
64251 chr17 7559097 7559097 1 + C T LUSC 7559096 + 7559076 7559116 41 GTGAAGTTCCTGAATGTGACCCCCAACGTGGAGGTGAATGT GTGAAGTTCCTGAATGTGACCTCCAACGTGGAGGTGAATGT < 41bp 0.450107877259463 0.718267545247106 0.008781463 0.93093956 prediction 0.436535090494212 Functional Gain - ATP1B2 ENSG00000129244 CDS Human protein_coding chr17:7559096 chr17:7559097 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_120497 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:7559082-7559110
64251 chr16 1816059 1816059 1 + C A UCEC 1816058 + 1816038 1816078 41 GGCGTGCTGGCCGGTATCACCCTGGTGGGCTGTGCCACCCG GGCGTGCTGGCCGGTATCACCATGGTGGGCTGTGCCACCCG < 41bp 0.461977172675895 0.718263518845146 0.2233319 0.8737849 prediction 0.436527037690292 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1816058 chr16:1816059 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120499 0 0 2 LSM11 POSTAR2 ENCODE chr16:1816059-1816111
64251 chr10 103917969 103917969 1 + C T rs139248308 103917968 + 103917948 103917988 41 AGACTAAAGCCCCTCCCAAACCAGGTACTGTTTCTGTTCCC AGACTAAAGCCCCTCCCAAACTAGGTACTGTTTCTGTTCCC < 41bp 0.566994242560385 0.785256364584892 0.8944986 0.80358076 prediction 0.436524244049015 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103917968 chr10:103917969 nonsynonymous SNV 0.905 1 22 hm5C_associated_SNPs_120500 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:103917944-103917971
64251 chr2 86705125 86705125 1 + C T UCEC 86705124 + 86705104 86705144 41 GGAGTATGTGTGGACTGCTACCGGATGAAGAGAAAGAATTG GGAGTATGTGTGGACTGCTACTGGATGAAGAGAAAGAATTG < 41bp 0.600019811007188 0.818279354502859 0.5215637 0.18505296 prediction 0.436519086991342 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86705124 chr2:86705125 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120503 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr2:86705087-86705126
64251 chr11 82880097 82880097 1 + C T SKCM 82880096 + 82880076 82880116 41 GTGGACTTAGATTTGATAATCCCCGAGGTCAGCCTGTAGGT GTGGACTTAGATTTGATAATCTCCGAGGTCAGCCTGTAGGT < 41bp 0.449142558942959 0.718259277208367 0.13069978 0.32502097 prediction 0.436518554416734 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82880096 chr11:82880097 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_120504 0 0 4 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:82880077-82880098
64251 chr19 50040373 50040373 1 + C T SKCM 50040372 + 50040352 50040392 41 CGGCGTTTCCGGGTGGCCGACCAGGATGGGGACTCGATGGC CGGCGTTTCCGGGTGGCCGACTAGGATGGGGACTCGATGGC < 41bp 0.604769503194518 0.823022712443538 0.80546343 0.46653602 prediction 0.43650641849804 Functional Gain - RCN3 ENSG00000142552 CDS Human protein_coding chr19:50040372 chr19:50040373 stopgain 0.992 0 22 hm5C_associated_SNPs_120506 0 0 3 GRWD1 POSTAR2 ENCODE chr19:50040321-50040448
64251 chr6 117050816 117050816 1 + T C HNSC 117050814 + 117050794 117050834 41 TCCAAGTGGCTTTAAATGGACTTGAAAATATTTTACGTCTT TCCAAGTGGCTTTAAATGGACTCGAAAATATTTTACGTCTT < 41bp 0.416615409092243 0.718241939006962 0.027923286 0.22554946 prediction 0.436483878013924 Functional Gain - KPNA5 ENSG00000196911 CDS Human protein_coding chr6:117050814 chr6:117050816 synonymous SNV . 0 23 hm5C_associated_SNPs_120510 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:117050802-117050866
64251 chr2 219494296 219494296 1 + C A COAD 219494292 + 219494272 219494312 41 GGTGGATGTATGGGATGGACCTAGCGGGGAACCTGTCGTTT GGTGGATGTATGGGATGGACCTAGAGGGGAACCTGTCGTTT < 41bp 0.719305783152392 0.937544108531952 0.09779182 0.13878357 prediction 0.436476650759121 Functional Gain - PLCD4 ENSG00000115556 CDS Human protein_coding chr2:219494292 chr2:219494296 nonsynonymous SNV 0.472 1 25 hm5C_associated_SNPs_120512 0 0 1 SSB POSTAR2 GSE95683,GSM2521600 chr2:219494280-219494300
64251 chr7 195593 195593 1 + C T STAD 195592 + 195572 195612 41 AGGTGCAGAATTCCTCTCCCCCGGGGAGGCGGCCGTGGACT AGGTGCAGAATTCCTCTCCCCTGGGGAGGCGGCCGTGGACT < 41bp 0.568056902006673 0.786293889082137 0.87884533 0.86434793 prediction 0.436473974150928 Functional Gain - FAM20C ENSG00000177706 CDS Human protein_coding chr7:195592 chr7:195593 synonymous SNV . 0 22 hm5C_associated_SNPs_120514 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:195579-195605
64251 chr19 54696060 54696060 1 + C T rs200626822 54696059 + 54696039 54696079 41 TGGCCACTGCCAGGCCTCGACCGGTCAAGGCCAGGCCCCTG TGGCCACTGCCAGGCCTCGACTGGTCAAGGCCAGGCCCCTG < 41bp 0.582699834168435 0.800936586932914 0.17587751 0.09972748 prediction 0.436473505528958 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54696059 chr19:54696060 nonsynonymous SNV 0.975 0 22 hm5C_associated_SNPs_120515 1 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr19:54696049-54696072
64251 chr2 10262892 10262892 1 + C G rs68002429 10262891 + 10262871 10262911 41 CCCTGTCCCAGCCGTCCTGTCCTGGCTGCTCGCTCTGCTTC CCCTGTCCCAGCCGTCCTGTCGTGGCTGCTCGCTCTGCTTC < 41bp 0.670266815367154 0.888502592951027 0.09170008 0.91544014 prediction 0.436471555167744 Functional Gain - RRM2 ENSG00000171848 CDS Human protein_coding chr2:10262891 chr2:10262892 synonymous SNV . 0 22 hm5C_associated_SNPs_120516 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:10262860-10262900
64251 chr15 89911264 89911264 1 + C G LUAD 89911260 + 89911240 89911280 41 TGGCTAAGGGAGGCCCGTTTCTCTCTTTGGTTATCTAGCTG TGGCTAAGGGAGGCCCGTTTCTCTGTTTGGTTATCTAGCTG < 41bp 0.453177905264792 0.718229667419552 0.1964648 0.16398689 prediction 0.436459334839103 Functional Gain - MIR9-3 ENSG00000207819 ncRNA_exonic Human other chr15:89911260 chr15:89911264 . . 0 25 hm5C_associated_SNPs_120517 0 0 6 PUM2 POSTAR2 GSE21578,GSM545210 chr15:89911260-89911280
64251 chr20 44751805 44751805 1 + C G BLCA 44751801 + 44751781 44751821 41 TACCATCTGCGAGCCCTGCCCAGTCGGCTTCTTCTCCAATG TACCATCTGCGAGCCCTGCCCAGTGGGCTTCTTCTCCAATG < 41bp 0.410160556600577 0.718225320661627 0.006671667 0.046877295 prediction 0.436450641323254 Functional Gain - CD40 ENSG00000101017 CDS Human protein_coding chr20:44751801 chr20:44751805 synonymous SNV . 0 25 hm5C_associated_SNPs_120518 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chr20:44751783-44751814
64251 chr15 85188820 85188820 1 - G C SKCM 85188821 - 85188801 85188841 41 GCGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTG GCGTCTTTGTCTTCTTGACCCGCGGGATCTCTGCCATCCTG < 41bp 0.668918392263259 0.887140101749015 0.2801754 0.92530584 prediction 0.436443418971512 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188821 chr15:85188820 synonymous SNV . 0 22 hm5C_associated_SNPs_120520 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:85188800-85188820
64251 chr8 145662151 145662151 1 - G A UCEC 145662152 - 145662132 145662172 41 CGGGGGGCGTCCGTCACCCTCCGCACTCGAAAGGTGAGCCT CGGGGGGCGTCCGTCACCCTCTGCACTCGAAAGGTGAGCCT < 41bp 0.471253705962288 0.718211478765692 0.08020881 0.1817236 prediction 0.436422957531384 Functional Gain - TONSL ENSG00000160949 CDS Human protein_coding chr8:145662152 chr8:145662151 nonsynonymous SNV 0.860 3 22 hm5C_associated_SNPs_120523 0 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr8:145662140-145662160
64251 chr19 45150522 45150522 1 + A G rs200120420 45150519 + 45150499 45150539 41 CGTCGTCGTGCAGGCGCCCACCCAGGTGCCCGGCTTCTTGG CGTCGTCGTGCAGGCGCCCACCCGGGTGCCCGGCTTCTTGG < 41bp 0.599873588925381 0.818074321619366 0.38280442 0.8714341 prediction 0.436401465387969 Functional Gain - PVR ENSG00000073008 CDS Human protein_coding chr19:45150519 chr19:45150522 nonsynonymous SNV 0.001 2 24 hm5C_associated_SNPs_120524 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:45150520-45150540
64251 chr10 12162849 12162849 1 + C A rs140386798 12162845 + 12162825 12162865 41 GTAGGAATTGGCACAGTTCACTTGCACCAGCATGAAGATAT GTAGGAATTGGCACAGTTCACTTGAACCAGCATGAAGATAT < 41bp 0.312165663466324 0.718192110316195 0.07970011 0.1160889 prediction 0.436384220632391 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12162845 chr10:12162849 nonsynonymous SNV 0.997 0 25 hm5C_associated_SNPs_120528 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:12162835-12162877
64251 chr3 49568722 49568722 1 + T C BLCA 49568720 + 49568700 49568740 41 GGAGAATGGGGCCCTTCTCTCCTGGAAGCTGGGCTGCTCCC GGAGAATGGGGCCCTTCTCTCCCGGAAGCTGGGCTGCTCCC < 41bp 0.604788174877957 0.822978863376293 0.87432516 0.83985734 prediction 0.436381376996672 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568720 chr3:49568722 nonsynonymous SNV 0.989 5 23 hm5C_associated_SNPs_120531 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49568686-49568734
64251 chr7 143086960 143086960 1 + C T SKCM 143086959 + 143086939 143086979 41 GCCCCTTCCAGGCAGTACGCCCCGAGGTGCTCCGTCTGCTC GCCCCTTCCAGGCAGTACGCCTCGAGGTGCTCCGTCTGCTC < 41bp 0.619677395524742 0.837858108918313 0.18220022 0.84311163 prediction 0.436361426787143 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143086959 chr7:143086960 nonsynonymous SNV 0.939 3 22 hm5C_associated_SNPs_120536 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:143086957-143087018
64251 chr11 1459557 1459557 1 + C T COAD 1459556 + 1459536 1459576 41 GTGGAGCGGGAGATCGCGATCCTGAAGCTCATTGAGCACCC GTGGAGCGGGAGATCGCGATCTTGAAGCTCATTGAGCACCC < 41bp 0.581878168171532 0.800058397778742 0.42261675 0.58293045 prediction 0.43636045921442 Functional Gain - BRSK2 ENSG00000174672 CDS Human protein_coding chr11:1459556 chr11:1459557 synonymous SNV . 0 22 hm5C_associated_SNPs_120537 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr11:1459553-1459581
64251 chrX 56591152 56591152 1 + C T COAD 56591151 + 56591131 56591171 41 TCAAGAGCCGATGCTGAATGCCGCACAAGAGCAGTTTGGGG TCAAGAGCCGATGCTGAATGCTGCACAAGAGCAGTTTGGGG < 41bp 0.552429942056138 0.770605716300776 0.21113506 0.12329212 prediction 0.436351548489276 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56591151 chrX:56591152 synonymous SNV . 0 22 hm5C_associated_SNPs_120538 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chrX:56591132-56591155
64251 chr16 67208993 67208993 1 + C G rs201000974 67208989 + 67208969 67209009 41 CTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGA CTGACAGGCGGTGCCCCGCCCATGGTGGATAGGACCTGGGA < 41bp 0.421532976751598 0.718174753930709 0.09226197 0.33062547 prediction 0.436349507861419 Functional Gain - NOL3 ENSG00000140939 CDS Human protein_coding chr16:67208989 chr16:67208993 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_120539 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:67208980-67209000
64251 chr15 79749742 79749742 1 + A G LIHC 79749739 + 79749719 79749759 41 GCGCCCAACTTACCTTGTGCCAAAGGATCAACAGCCAATTC GCGCCCAACTTACCTTGTGCCAAGGGATCAACAGCCAATTC < 41bp 0.476107140256705 0.71816818712262 0.09060657 0.250045 prediction 0.43633637424524 Functional Gain - KIAA1024 ENSG00000169330 CDS Human protein_coding chr15:79749739 chr15:79749742 nonsynonymous SNV 0.016 0 24 hm5C_associated_SNPs_120540 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr15:79749737-79749773
64251 chr18 60017105 60017105 1 + C T GBM 60017104 + 60017084 60017124 41 GTGTATGTCTGCCCTGTGGCCCGGATGAATACTTGGATAGC GTGTATGTCTGCCCTGTGGCCTGGATGAATACTTGGATAGC < 41bp 0.594819292873016 0.812970429018111 0.64663506 0.44010305 prediction 0.436302272290192 Functional Gain - TNFRSF11A ENSG00000141655 CDS Human protein_coding chr18:60017104 chr18:60017105 nonsynonymous SNV 0.201 0 22 hm5C_associated_SNPs_120551 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:60017082-60017107
64251 chr5 52285306 52285306 1 + C A UCEC 52285305 + 52285285 52285325 41 CGGTCAGACCCAGGATGGGGCCAGAACGGACAGGGGCCGCG CGGTCAGACCCAGGATGGGGCAAGAACGGACAGGGGCCGCG < 41bp 0.576306595002419 0.794457597096863 0.29486603 0.39280617 prediction 0.436302004188887 Functional Gain - ITGA2 ENSG00000164171 CDS Human protein_coding chr5:52285305 chr5:52285306 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_120552 0 0 5 DDX3X POSTAR2 ENCODE chr5:52285293-52285357
64251 chr15 75190031 75190031 1 + C T UCEC 75190030 + 75190010 75190050 41 TCTCACTGAAGCTTACTGAGCCGAAGGACCTGCTGATATTC TCTCACTGAAGCTTACTGAGCTGAAGGACCTGCTGATATTC < 41bp 0.571818587066886 0.789950524953975 0.46081233 0.21189332 prediction 0.436263875774178 Functional Gain - MPI ENSG00000178802 CDS Human protein_coding chr15:75190030 chr15:75190031 nonsynonymous SNV 0.369 1 22 hm5C_associated_SNPs_120564 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:75190000-75190048
64251 chr21 30411367 30411367 1 + T G rs78056639 30411365 + 30411345 30411385 41 AGGAACCATTAGAAATAAACCTTGAGCCTCCAGGCCCTCTT AGGAACCATTAGAAATAAACCTGGAGCCTCCAGGCCCTCTT < 41bp 0.66961507488086 0.88774422464103 0.00825423 0.13755554 prediction 0.43625829952034 Functional Gain - USP16 ENSG00000156256 CDS Human protein_coding chr21:30411365 chr21:30411367 synonymous SNV . 0 23 hm5C_associated_SNPs_120566 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:30411339-30411373
64251 chr20 3783576 3783576 1 + T C COAD 3783573 + 3783553 3783593 41 TCAGGCCTTCCTCCTACAGACAGTAGACGGAAAGCACCAAG TCAGGCCTTCCTCCTACAGACAGCAGACGGAAAGCACCAAG < 41bp 0.524352214073701 0.742471580365526 0.09810236 0.12830985 prediction 0.436238732583649 Functional Gain - CDC25B ENSG00000101224 CDS Human protein_coding chr20:3783573 chr20:3783576 nonsynonymous SNV 0.952 3 24 hm5C_associated_SNPs_120571 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr20:3783560-3783580
64251 chr19 11113800 11113800 1 + C T rs548456029 11113799 + 11113779 11113819 41 AGGCACAGATGCCCCCAAAGCCGGGCAGCTGGAGGCCTGGC AGGCACAGATGCCCCCAAAGCTGGGCAGCTGGAGGCCTGGC < 41bp 0.560520464672766 0.778639757997811 0.8630029 0.5131945 prediction 0.436238586650088 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11113799 chr19:11113800 synonymous SNV . 0 22 hm5C_associated_SNPs_120572 0 0 16 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11113798-11113833
64251 chr19 10200710 10200710 1 + C T SKCM 10200709 + 10200689 10200729 41 ACGTCTGGTGGCGCCGCGTGCCCCAGCGGAAGGAGGTGATG ACGTCTGGTGGCGCCGCGTGCTCCAGCGGAAGGAGGTGATG < 41bp 0.620174636968736 0.838286421709138 0.14727578 0.54708225 prediction 0.436223569480804 Functional Gain - C19orf66 ENSG00000130813 CDS Human protein_coding chr19:10200709 chr19:10200710 nonsynonymous SNV 0.960 4 22 hm5C_associated_SNPs_120576 0 0 2 GRWD1 POSTAR2 ENCODE chr19:10200628-10200725
64251 chr17 48761062 48761062 1 + C G rs41280128 48761058 + 48761038 48761078 41 GGAATTATTCTGTGCGCTACCGGCCGGGCCTAGACCTGGTG GGAATTATTCTGTGCGCTACCGGCGGGGCCTAGACCTGGTG < 41bp 0.420426774011336 0.718104624636034 0.66780424 0.90551317 prediction 0.436209249272068 Functional Gain - ABCC3 ENSG00000108846 CDS Human protein_coding chr17:48761058 chr17:48761062 nonsynonymous SNV 0.792 2 25 hm5C_associated_SNPs_120579 0 0 3 LSM11 POSTAR2 ENCODE chr17:48761048-48761118
64251 chr19 50881460 50881460 1 + C T SKCM 50881459 + 50881439 50881479 41 AGCGAAAGAAGGGCCCAGCCCCGAAGATGCTGGGCCACGAG AGCGAAAGAAGGGCCCAGCCCTGAAGATGCTGGGCCACGAG < 41bp 0.583055560194401 0.801159909204216 0.5842329 0.570526 prediction 0.436208698019631 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881459 chr19:50881460 nonsynonymous SNV 0.192 3 22 hm5C_associated_SNPs_120580 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:50881459-50881460
64251 chr12 132401997 132401997 1 + C G rs569526446 132401996 + 132401976 132402016 41 GGGAGCCTGCACCCAGGAGCCCGTGCTGGGGGCACCAGCAG GGGAGCCTGCACCCAGGAGCCGGTGCTGGGGGCACCAGCAG < 41bp 0.403994213823034 0.718101518695296 0.37799475 0.8746216 prediction 0.436203037390592 Functional Gain - ULK1 ENSG00000177169 CDS Human protein_coding chr12:132401996 chr12:132401997 nonsynonymous SNV 0.678 1 22 hm5C_associated_SNPs_120582 0 0 14 BUD13 POSTAR2 ENCODE chr12:132401959-132402000
64251 chr17 16285426 16285426 1 + C T UCEC 16285425 + 16285405 16285445 41 CAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGG CAGAAGGAGTCGACCCTGCACTTGGTCCTGCGTCTGAGAGG < 41bp 0.48586339179149 0.718097304857669 0.18530792 0.14944586 prediction 0.436194609715338 Functional Gain - UBB ENSG00000170315 CDS Human protein_coding chr17:16285425 chr17:16285426 synonymous SNV . 0 22 hm5C_associated_SNPs_120584 0 0 5 EIF3H POSTAR2 ENCODE chr17:16285416-16285439
64251 chr11 66283032 66283032 1 + C T SKCM 66283031 + 66283011 66283051 41 GACCGAATCGACCCCTTAACCCTGAAGGAGATGCTGGAGAG GACCGAATCGACCCCTTAACCTTGAAGGAGATGCTGGAGAG < 41bp 0.61043585419728 0.828529041236001 0.14531279 0.18475986 prediction 0.436186374077442 Functional Gain - BBS1 ENSG00000174483;ENSG00000256349 CDS Human other chr11:66283031 chr11:66283032 synonymous SNV . 0 22 hm5C_associated_SNPs_120586 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr11:66283018-66283034
64251 chr1 26885302 26885302 1 + C T rs143984856 26885301 + 26885281 26885321 41 TCCTTCCATCCGTACAGATTCCCCAGGCATCCCCCCCAGCG TCCTTCCATCCGTACAGATTCTCCAGGCATCCCCCCCAGCG < 41bp 0.625202033642569 0.8432889465577 0.11833659 0.9443694 prediction 0.436173825830262 Functional Gain - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26885301 chr1:26885302 synonymous SNV . 0 22 hm5C_associated_SNPs_120587 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:26885276-26885314
64251 chr11 134132696 134132696 1 + C T rs145165576 134132695 + 134132675 134132715 41 CAGGGGCCTGGAGTCCAGAGCCGCAGCTTCGTCCCTTTCGG CAGGGGCCTGGAGTCCAGAGCTGCAGCTTCGTCCCTTTCGG < 41bp 0.512073596576569 0.730155187673795 0.69468665 0.5519295 prediction 0.436163182194451 Functional Gain - ACAD8 ENSG00000151498 CDS Human protein_coding chr11:134132695 chr11:134132696 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_120592 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:134132677-134132715
64251 chr18 47901537 47901537 1 + T A rs140808298 47901533 + 47901513 47901553 41 CGCAGCTGGAGACCCAGCGGCGAGTAGCCTTTTGCTCCCGG CGCAGCTGGAGACCCAGCGGCGAGAAGCCTTTTGCTCCCGG < 41bp 0.577273278371824 0.795345033500973 0.28738856 0.64166254 prediction 0.436143510258298 Functional Gain - SKA1 ENSG00000154839 UTR5 Human protein_coding chr18:47901533 chr18:47901537 . . 0 25 hm5C_associated_SNPs_120595 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:47901524-47901550
64251 chr2 3425682 3425682 1 + C A LUSC 3425681 + 3425661 3425701 41 AACTGGAGGGCAGCAGTGGACCTGTGCGGACGTCTCCTCAC AACTGGAGGGCAGCAGTGGACATGTGCGGACGTCTCCTCAC < 41bp 0.449054232964141 0.718071433126291 0.080411136 0.3965787 prediction 0.436142866252582 Functional Gain - TRAPPC12 ENSG00000171853 CDS Human protein_coding chr2:3425681 chr2:3425682 nonsynonymous SNV 0.745 3 22 hm5C_associated_SNPs_120596 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:3425673-3425684
64251 chr4 39482269 39482269 1 + C T SKCM 39482268 + 39482248 39482288 41 GTGTCCTCCGTGAAATTCAGCCCGAATGGAGAGTGGCTGGC GTGTCCTCCGTGAAATTCAGCTCGAATGGAGAGTGGCTGGC < 41bp 0.51237450146813 0.730444039073612 0.05471301 0.14102677 prediction 0.436139075210963 Functional Gain - LOC401127 ENSG00000224097 ncRNA_exonic Human transcribed_processed_pseudogene chr4:39482268 chr4:39482269 . . 0 22 hm5C_associated_SNPs_120597 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:39482260-39482280
64251 chr1 182827872 182827872 1 + A G BLCA 182827869 + 182827849 182827889 41 TTTTCTTATTTTTTAATAGCCTGAAGATCCTTCTGTGCCAG TTTTCTTATTTTTTAATAGCCTGGAGATCCTTCTGTGCCAG < 41bp 0.530238824041075 0.748308192446317 0.18079162 0.4038347 prediction 0.436138736810484 Functional Gain - DHX9 ENSG00000135829 CDS Human protein_coding chr1:182827869 chr1:182827872 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_120598 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr1:182827860-182827880
64251 chr15 85188819 85188819 1 - G A BLCA 85188820 - 85188800 85188840 41 CGTCTTTGTCTTCTTGACCCCCGGGATCTCTGCCATCCTGT CGTCTTTGTCTTCTTGACCCCTGGGATCTCTGCCATCCTGT < 41bp 0.55124508844249 0.769306461023381 0.91170275 0.36133844 prediction 0.436122745161783 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85188820 chr15:85188819 nonsynonymous SNV 0.942 4 22 hm5C_associated_SNPs_120602 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:85188800-85188820
64251 chr17 40937399 40937399 1 + A G STAD 40937396 + 40937376 40937416 41 CGGGCCTCAAGCTCTGGCTGCGCATGGAGGACGCGCGGCGC CGGGCCTCAAGCTCTGGCTGCGCGTGGAGGACGCGCGGCGC < 41bp 0.461352605568024 0.718056267717749 0.4176679 0.553108 prediction 0.436112535435497 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40937396 chr17:40937399 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_120605 0 0 4 BUD13 POSTAR2 ENCODE chr17:40937386-40937421
64251 chr1 211556164 211556164 1 + C G rs536163023 211556160 + 211556140 211556180 41 GCGCTGTGACGTTCCCTACGCGGTCGGGCGTTGGGTTTCGC GCGCTGTGACGTTCCCTACGCGGTGGGGCGTTGGGTTTCGC < 41bp 0.429231909855921 0.718054831181064 0.22265399 0.3872777 prediction 0.436109662362127 Functional Gain - LINC00467 ENSG00000153363 ncRNA_exonic Human lincRNA chr1:211556160 chr1:211556164 . . 0 25 hm5C_associated_SNPs_120606 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585675 chr1:211556150-211556169
64251 chr20 39690105 39690105 1 + C T STAD 39690104 + 39690084 39690124 41 GAACACAAGAAGGAGAAGGACCGGGAAAAGTCCAAGCATAG GAACACAAGAAGGAGAAGGACTGGGAAAAGTCCAAGCATAG < 41bp 0.479582233504213 0.71805113656114 0.41580263 0.19180122 prediction 0.436102273122281 Functional Gain - TOP1 ENSG00000198900 CDS Human protein_coding chr20:39690104 chr20:39690105 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_120608 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr20:39690093-39690127
64251 chr17 7347574 7347574 1 + A G rs540859335 7347571 + 7347551 7347591 41 TTTTGGAAGGATCCCTGGCTCATAGTAGGGAAGCTGGGATG TTTTGGAAGGATCCCTGGCTCATGGTAGGGAAGCTGGGATG < 41bp 0.552502664661231 0.770553138314595 0.48389745 0.765527 prediction 0.436100947306726 Functional Gain - FGF11 ENSG00000272884 ncRNA_exonic Human processed_transcript chr17:7347571 chr17:7347574 . . 0 24 hm5C_associated_SNPs_120609 0 0 1 UPF1 POSTAR2 ENCODE chr17:7347565-7347666
64251 chr5 154194633 154194633 1 + C T rs185584929 154194632 + 154194612 154194652 41 TTTTCCTCGGTGGAGTCAACCCGAAGAGCTCCCACCTTCTC TTTTCCTCGGTGGAGTCAACCTGAAGAGCTCCCACCTTCTC < 41bp 0.494208992397442 0.71803432889625 0.34356365 0.29923153 prediction 0.436068657792501 Functional Gain - LARP1 ENSG00000155506 UTR3 Human protein_coding chr5:154194632 chr5:154194633 . . 0 22 hm5C_associated_SNPs_120612 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:154194536-154194634
64251 chr2 192261212 192261212 1 + C T PRAD 192261211 + 192261191 192261231 41 TTAGTAATTCAGTCTTATATCCGGGGTTGGAAGGTGAGTTT TTAGTAATTCAGTCTTATATCTGGGGTTGGAAGGTGAGTTT < 41bp 0.555702512220745 0.773736393984251 0.9319222 0.89922655 prediction 0.436067763527013 Functional Gain - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192261211 chr2:192261212 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120613 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:192261194-192261220
64251 chr10 133769591 133769591 1 + A G rs537006468 133769588 + 133769568 133769608 41 GCACCTGCTACTTCCCTTCACAGACACAGGAGAAAGCCGCC GCACCTGCTACTTCCCTTCACAGGCACAGGAGAAAGCCGCC < 41bp 0.576489762693354 0.79451375966228 0.031828105 0.10839081 prediction 0.436047993937852 Functional Gain - PPP2R2D ENSG00000175470 UTR3 Human protein_coding chr10:133769588 chr10:133769591 . . 0 24 hm5C_associated_SNPs_120617 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:133769548-133769595
64251 chr15 63882955 63882955 1 + T C UCEC 63882952 + 63882932 63882972 41 AACACTGACTGACGAGGAGACTGTGGTGAAGGCGAAGGCCT AACACTGACTGACGAGGAGACTGCGGTGAAGGCGAAGGCCT < 41bp 0.50657654676331 0.724587112696977 0.22548974 0.3998856 prediction 0.436021131867334 Functional Gain - USP3 ENSG00000140455 CDS Human protein_coding chr15:63882952 chr15:63882955 nonsynonymous SNV 0.993 4 24 hm5C_associated_SNPs_120620 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:63882943-63882990
64251 chr14 39650749 39650749 1 + T C UCEC 39650746 + 39650726 39650766 41 AGTAGTTCCAGTAGCAGCTCCAGTACAAGTGGCAGCAGCAG AGTAGTTCCAGTAGCAGCTCCAGCACAAGTGGCAGCAGCAG < 41bp 0.506477921446901 0.724488218604325 0.29210147 0.28825796 prediction 0.436020594314849 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650746 chr14:39650749 synonymous SNV . 0 24 hm5C_associated_SNPs_120621 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chr20 33513944 33513944 1 + T C LUAD 33513941 + 33513921 33513961 41 TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTG TACAGCAGAGGTGGAGTCAGCACCTGTGGAACATGAGGCTG < 41bp 0.507481604487088 0.725479722367093 0.26602653 0.24123502 prediction 0.435996235760008 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33513941 chr20:33513944 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_120626 0 0 2 PPIG POSTAR2 ENCODE chr20:33513919-33513948
64251 chr10 77167056 77167056 1 + C T COAD 77167055 + 77167035 77167075 41 GTCGTTTGCGCTGCATTTATCCGAATACATCCAGCTCGCAG GTCGTTTGCGCTGCATTTATCTGAATACATCCAGCTCGCAG < 41bp 0.533240154890643 0.751234858527111 0.40659544 0.10297957 prediction 0.435989407272936 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167055 chr10:77167056 . . 0 22 hm5C_associated_SNPs_120627 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:77167010-77167057
64251 chr16 1838710 1838710 1 + C T SKCM 1838709 + 1838689 1838729 41 GACGCGACGCCCGCGTGCCTCCCCTGACTAAGGCCACCTTG GACGCGACGCCCGCGTGCCTCTCCTGACTAAGGCCACCTTG < 41bp 0.481044796370438 0.717992028549367 0.015850663 0.071358174 prediction 0.435984057098733 Functional Gain - NUBP2 ENSG00000095906 CDS Human protein_coding chr16:1838709 chr16:1838710 nonsynonymous SNV 0.007 1 22 hm5C_associated_SNPs_120629 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1838682-1838717
64251 chr5 70806317 70806317 1 + A G LAML 70806314 + 70806294 70806334 41 TTCCCCAAGGGAGAAGACACCAGAGGTGATTGATGCCACTG TTCCCCAAGGGAGAAGACACCAGGGGTGATTGATGCCACTG < 41bp 0.542046140010067 0.760031487774269 0.87569815 0.9052906 prediction 0.435970695528404 Functional Gain - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70806314 chr5:70806317 nonsynonymous SNV 0.004 3 24 hm5C_associated_SNPs_120634 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003588 chr5:70806317-70806338
64251 chr19 41825577 41825577 1 + C T SKCM 41825576 + 41825556 41825596 41 ACCCAGGAGGAGCTCAGTGCCCGCACCCCAACCCACCAGCC ACCCAGGAGGAGCTCAGTGCCTGCACCCCAACCCACCAGCC < 41bp 0.606064487079383 0.824043806195597 0.17501178 0.33442605 prediction 0.435958638232428 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41825576 chr19:41825577 nonsynonymous SNV 0.282 4 22 hm5C_associated_SNPs_120635 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:41825567-41825594
64251 chr21 47418338 47418338 1 + C T rs143755280 47418337 + 47418317 47418357 41 TCCGGGCAACAGGGGCGCTCCCGGGATAAACGTGAGTACGC TCCGGGCAACAGGGGCGCTCCTGGGATAAACGTGAGTACGC < 41bp 0.553255572157342 0.771228785044111 0.9101526 0.8822943 prediction 0.435946425773537 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47418337 chr21:47418338 synonymous SNV . 0 22 hm5C_associated_SNPs_120637 1 0 2 PTBP1 POSTAR2 GSE57278,GSM1378377 chr21:47418337-47418338
64251 chr17 73491369 73491369 1 + C T SKCM 73491368 + 73491348 73491388 41 GGCTTTTGTCCCCACAGTGTCCCGAGATGATGCAGAAGGGC GGCTTTTGTCCCCACAGTGTCTCGAGATGATGCAGAAGGGC < 41bp 0.453652804076532 0.717966059960665 0.13552234 0.56387115 prediction 0.435932119921331 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73491368 chr17:73491369 synonymous SNV . 0 22 hm5C_associated_SNPs_120639 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:73491364-73491409
64251 chr9 135906418 135906418 1 + A G UCEC 135906415 + 135906395 135906435 41 AGGGATGGCGGCGGAGGCGGCCGATTTGGGGCTGGGGGCCG AGGGATGGCGGCGGAGGCGGCCGGTTTGGGGCTGGGGGCCG < 41bp 0.580543046968247 0.798506414648889 0.9060329 0.90340954 prediction 0.435926735361283 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135906415 chr9:135906418 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_120641 0 0 9 RBM15B POSTAR2 GSE78030,GSM2064711 chr9:135906400-135906420
64251 chr19 35556561 35556561 1 + C T LGG 35556560 + 35556540 35556580 41 GATGTTCTGTGCTGGCTACCCCGAGGGTGGCATTGATGCCT GATGTTCTGTGCTGGCTACCCTGAGGGTGGCATTGATGCCT < 41bp 0.476156960234594 0.717962420648252 0.9013005 0.78922665 prediction 0.435924841296503 Functional Gain - HPN ENSG00000105707 CDS Human protein_coding chr19:35556560 chr19:35556561 synonymous SNV . 0 22 hm5C_associated_SNPs_120642 0 0 2 PPIG POSTAR2 ENCODE chr19:35556546-35556584
64251 chr19 4318404 4318404 1 + C T OV 4318403 + 4318383 4318423 41 CCTGCGGGTGGATGATCTCTCCGTGGAGTGGGACGCTATGG CCTGCGGGTGGATGATCTCTCTGTGGAGTGGGACGCTATGG < 41bp 0.58083981338925 0.798794897207637 0.72936195 0.63646173 prediction 0.435910167636774 Functional Gain - FSD1 ENSG00000105255 CDS Human protein_coding chr19:4318403 chr19:4318404 synonymous SNV . 0 22 hm5C_associated_SNPs_120643 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:4318396-4318417
64251 chr6 16247140 16247140 1 + T C UCEC 16247138 + 16247118 16247158 41 TACTCAGGGATTCCCATCATCGTGGCCAACATGGACACTGT TACTCAGGGATTCCCATCATCGCGGCCAACATGGACACTGT < 41bp 0.619441159904199 0.837394621606539 0.81911576 0.7307387 prediction 0.435906923404679 Functional Gain - GMPR ENSG00000137198 CDS Human protein_coding chr6:16247138 chr6:16247140 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_120644 0 0 1 IGF2BP1 POSTAR2 ENCODE chr6:16247076-16247159
64251 chr19 808629 808629 1 + C T STAD 808628 + 808608 808648 41 CACCAGAACGTGCAGCTGCCCCGCGAGGGCCAGGAGGACCA CACCAGAACGTGCAGCTGCCCTGCGAGGGCCAGGAGGACCA < 41bp 0.605214792976304 0.823166147373789 0.043732792 0.04906559 prediction 0.43590270879497 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808628 chr19:808629 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_120647 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:808612-808648
64251 chr19 44500475 44500475 1 + T G rs147391627 44500472 + 44500452 44500492 41 CCCAGGGTGGGAAGTGTAAACAGTCCATCAGTGATGTTCCC CCCAGGGTGGGAAGTGTAAACAGGCCATCAGTGATGTTCCC < 41bp 0.32201383543775 0.717949195000141 0.12593535 0.39467648 prediction 0.435898390000281 Functional Gain - ZNF155 ENSG00000204920 CDS Human protein_coding chr19:44500472 chr19:44500475 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_120652 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:44500474-44500475
64251 chr8 22460089 22460089 1 + A G HNSC 22460086 + 22460066 22460106 41 GGGACAAGGTCAAGGTCCTGCTCAACCGGATCTGCCGGAGA GGGACAAGGTCAAGGTCCTGCTCGACCGGATCTGCCGGAGA < 41bp 0.576034497168078 0.79397642893402 0.10295844 0.15441304 prediction 0.435883863531884 Functional Gain - C8orf58 ENSG00000241852 CDS Human protein_coding chr8:22460086 chr8:22460089 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_120657 0 0 1 BUD13 POSTAR2 ENCODE chr8:22460003-22460095
64251 chr19 50905947 50905947 1 + A G SKCM 50905944 + 50905924 50905964 41 CACCGGAAGGGCCATGGCAGCGCATTGCGCCCTTGCGCGTG CACCGGAAGGGCCATGGCAGCGCGTTGCGCCCTTGCGCGTG < 41bp 0.588569462983806 0.806508650965699 0.1779367 0.25224745 prediction 0.435878375963786 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50905944 chr19:50905947 nonsynonymous SNV 0.986 1 24 hm5C_associated_SNPs_120659 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:50905940-50905980
64251 chr12 65563754 65563754 1 + C T rs61736593 65563753 + 65563733 65563773 41 GGGAGGGCCCGGGGGCGCCTCCGCCGCCCCCGCGGCTGGCA GGGAGGGCCCGGGGGCGCCTCTGCCGCCCCCGCGGCTGGCA < 41bp 0.537292246909632 0.755226718033425 0.80827785 0.82140684 prediction 0.435868942247586 Functional Gain - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65563753 chr12:65563754 synonymous SNV . 0 22 hm5C_associated_SNPs_120662 1 0 1 RPS3 POSTAR2 ENCODE chr12:65563682-65563756
64251 chr19 11475141 11475141 1 + C A rs547982015 11475137 + 11475117 11475157 41 TCGATTGAGGTCTGAGCCGACGCCCTTGCCCCTGCCCCTAC TCGATTGAGGTCTGAGCCGACGCCATTGCCCCTGCCCCTAC < 41bp 0.717442332013863 0.935374812585619 0.28251588 0.6498026 prediction 0.435864961143513 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11475137 chr19:11475141 synonymous SNV . 0 25 hm5C_associated_SNPs_120663 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:11475119-11475141
64251 chr5 154181820 154181820 1 + C A PRAD 154181819 + 154181799 154181839 41 CACATTACATGCGCCGGCACCCAGGGGGGGACCGCACAGGC CACATTACATGCGCCGGCACCAAGGGGGGGACCGCACAGGC < 41bp 0.449107312952366 0.717925640181324 0.7741393 0.8211423 prediction 0.435851280362647 Functional Gain - LARP1 ENSG00000155506 CDS Human protein_coding chr5:154181819 chr5:154181820 nonsynonymous SNV 0.968 4 22 hm5C_associated_SNPs_120665 0 0 23 FMR1 POSTAR2 GSE39682,GSM977615 chr5:154181768-154181823
64251 chr17 79974398 79974398 1 + C T ESCA 79974397 + 79974377 79974417 41 TGCACTTGGGAGCCGAGGAGCCGGCAGGTGAGTGTCAGTGG TGCACTTGGGAGCCGAGGAGCTGGCAGGTGAGTGTCAGTGG < 41bp 0.496303999000885 0.717922091500467 0.87547654 0.82922816 prediction 0.435844183000933 Functional Gain - ASPSCR1 ENSG00000169696 CDS Human protein_coding chr17:79974397 chr17:79974398 nonsynonymous SNV 0.009 2 22 hm5C_associated_SNPs_120666 0 0 7 EFTUD2 POSTAR2 ENCODE chr17:79974362-79974410
64251 chr17 57682512 57682512 1 + T C UCEC 57682510 + 57682490 57682530 41 CGTTTTGCACAATGGATGGTCGTGGAAGCCCAGTTCACATT CGTTTTGCACAATGGATGGTCGCGGAAGCCCAGTTCACATT < 41bp 0.4432962368467 0.717921257735315 0.62083405 0.8305056 prediction 0.435842515470629 Functional Gain - DHX40 ENSG00000108406 CDS Human protein_coding chr17:57682510 chr17:57682512 synonymous SNV . 0 23 hm5C_associated_SNPs_120667 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr17:57682497-57682522
64251 chr20 44506068 44506068 1 + C T rs35928298 44506067 + 44506047 44506087 41 GTGGACCCTTCATTCCATTACCGGGCTATCCTGCAGGAGAT GTGGACCCTTCATTCCATTACTGGGCTATCCTGCAGGAGAT < 41bp 0.568174663386718 0.786095517356854 0.43140167 0.2555468 prediction 0.435841707940272 Functional Gain - ZSWIM3 ENSG00000132801 CDS Human protein_coding chr20:44506067 chr20:44506068 nonsynonymous SNV 0.418 1 22 hm5C_associated_SNPs_120668 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr20:44506050-44506079
64251 chr11 61563364 61563364 1 + C T COAD 61563363 + 61563343 61563383 41 CAAAGTCTATGCTGCGGCTACCGAGGACATGGACTGCCTCA CAAAGTCTATGCTGCGGCTACTGAGGACATGGACTGCCTCA < 41bp 0.557442723881594 0.775361228867326 0.8804997 0.33774453 prediction 0.435837009971464 Functional Gain - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563363 chr11:61563364 synonymous SNV . 0 22 hm5C_associated_SNPs_120670 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr11:61563340-61563380
64251 chr16 8722759 8722759 1 + C T UCEC 8722758 + 8722738 8722778 41 TGAGGGTTTCTCCCTCCAGGCCGGGACTGACACCACTGGCC TGAGGGTTTCTCCCTCCAGGCTGGGACTGACACCACTGGCC < 41bp 0.548612450134808 0.766530717041031 0.27015948 0.50920844 prediction 0.435836533812446 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722758 chr16:8722759 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_120671 0 0 5 GRWD1 POSTAR2 ENCODE chr16:8722735-8722805
64251 chr10 73082659 73082659 1 + T G STAD 73082656 + 73082636 73082676 41 GCCTGCAGAGGCCCGAGGACCGCTTCTGTGGCACATACATC GCCTGCAGAGGCCCGAGGACCGCGTCTGTGGCACATACATC < 41bp 0.311987685180126 0.717910277236168 0.013630092 0.030041546 prediction 0.435820554472335 Functional Gain - SLC29A3 ENSG00000198246 CDS Human protein_coding chr10:73082656 chr10:73082659 nonsynonymous SNV 0.685 1 24 hm5C_associated_SNPs_120672 0 0 1 TBRG4 POSTAR2 ENCODE chr10:73082636-73082669
64251 chr7 99688276 99688276 1 + A G ESCA 99688273 + 99688253 99688293 41 GAACCCTATGACCAAGCACACAGATGTGAGTAATACTCCAT GAACCCTATGACCAAGCACACAGGTGTGAGTAATACTCCAT < 41bp 0.482663740474816 0.717910075766591 0.9351617 0.94868106 prediction 0.435820151533182 Functional Gain - COPS6 ENSG00000168090 CDS Human protein_coding chr7:99688273 chr7:99688276 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_120674 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:99688246-99688282
64251 chrX 64959726 64959726 1 + C G UCEC 64959722 + 64959702 64959742 41 CAGATCCGGCAGGGCAACACCAAGCAGCGCATTGACGAATT CAGATCCGGCAGGGCAACACCAAGGAGCGCATTGACGAATT < 41bp 0.432610060152607 0.717905700041414 0.20277247 0.33294123 prediction 0.435811400082827 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64959722 chrX:64959726 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_120676 0 0 1 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:64959720-64959760
64251 chr4 1309205 1309205 1 + C T STAD 1309204 + 1309184 1309224 41 GGCGGTGGAATCCATCCAGGCCGAGGACGAGAGCGCCAAGC GGCGGTGGAATCCATCCAGGCTGAGGACGAGAGCGCCAAGC < 41bp 0.490172519758735 0.717905239242586 0.20757395 0.26830143 prediction 0.435810478485171 Functional Gain - MAEA ENSG00000090316 CDS Human protein_coding chr4:1309204 chr4:1309205 synonymous SNV . 0 22 hm5C_associated_SNPs_120677 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:1309182-1309228
64251 chr12 31250930 31250930 1 + C T UCEC 31250929 + 31250909 31250949 41 TTGCGGGGGGTACCATGCAGCCGGTAAGGACACCTTTCCCA TTGCGGGGGGTACCATGCAGCTGGTAAGGACACCTTTCCCA < 41bp 0.541807369591477 0.759703877318312 0.22286555 0.26551068 prediction 0.435793015453671 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31250929 chr12:31250930 nonsynonymous SNV 0.621 4 22 hm5C_associated_SNPs_120680 0 0 4 DDX24 POSTAR2 ENCODE chr12:31250874-31250935
64251 chrX 69510335 69510335 1 + C T rs1199470 69510334 + 69510314 69510354 41 GGAAGAGGTGAAGGGAATTCCCGTAAGAGTGGCGCTGCGTT GGAAGAGGTGAAGGGAATTCCTGTAAGAGTGGCGCTGCGTT < 41bp 0.482732367012417 0.717895008135444 0.2884832 0.38356274 prediction 0.435790016270889 Functional Gain - KIF4A ENSG00000090889 CDS Human protein_coding chrX:69510334 chrX:69510335 synonymous SNV . 0 22 hm5C_associated_SNPs_120682 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819214 chrX:69510320-69510340
64251 chr22 29627634 29627634 1 + C T UCEC 29627633 + 29627613 29627653 41 CACCGGCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG CACCGGCCCCAAGGGAGATGCTGGCAGTCGGGGCCCAATGG < 41bp 0.482274890064768 0.717891988985452 0.9167774 0.88728225 prediction 0.435783977970905 Functional Gain - EMID1 ENSG00000186998 CDS Human protein_coding chr22:29627633 chr22:29627634 synonymous SNV . 0 22 hm5C_associated_SNPs_120684 0 0 1 RPS5 POSTAR2 ENCODE chr22:29627578-29627654
64251 chr11 70052448 70052448 1 + A G UCEC 70052445 + 70052425 70052465 41 TGGCCCACCTGGTGGGGGCTCTCAGGTCCTGCCAGATGAAC TGGCCCACCTGGTGGGGGCTCTCGGGTCCTGCCAGATGAAC < 41bp 0.565203312250616 0.783092418935788 0.65012443 0.6156458 prediction 0.435778213370345 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70052445 chr11:70052448 nonsynonymous SNV 0.024 5 24 hm5C_associated_SNPs_120685 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr11:70052438-70052462
64251 chr10 106025870 106025870 1 + T G GBM 106025868 + 106025848 106025888 41 ACTAATAAGAAGACGACCTTCTTTGGTGGCAATTCTATCTC ACTAATAAGAAGACGACCTTCTGTGGTGGCAATTCTATCTC < 41bp 0.381954094000518 0.717879948309309 0.053399086 0.117982894 prediction 0.435759896618618 Functional Gain - GSTO1 ENSG00000148834 CDS Human protein_coding chr10:106025868 chr10:106025870 nonsynonymous SNV 0.912 4 23 hm5C_associated_SNPs_120689 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:106025859-106025892
64251 chr1 231906697 231906697 1 + C T SKCM 231906696 + 231906676 231906716 41 GTGGCAGGGCTGCGACCTGACCCCACTGGTGGGCCAGCTGT GTGGCAGGGCTGCGACCTGACTCCACTGGTGGGCCAGCTGT < 41bp 0.471812372022003 0.717879031930602 0.089631826 0.9449831 prediction 0.435758063861204 Functional Gain - DISC1 ENSG00000162946 CDS Human protein_coding chr1:231906696 chr1:231906697 synonymous SNV . 0 22 hm5C_associated_SNPs_120690 0 0 4 FASTKD2 POSTAR2 ENCODE chr1:231906580-231906760
64251 chr9 135866411 135866411 1 + C T LUSC 135866410 + 135866390 135866430 41 AAGGTGGACCTGCGGCGGCACCGCGAGAGCCAGCACAATCT AAGGTGGACCTGCGGCGGCACTGCGAGAGCCAGCACAATCT < 41bp 0.552388929556283 0.770267437202644 0.20143741 0.28825694 prediction 0.435757015292721 Functional Gain - GFI1B ENSG00000165702 CDS Human protein_coding chr9:135866410 chr9:135866411 nonsynonymous SNV 0.718 4 22 hm5C_associated_SNPs_120691 0 0 1 RPS3 POSTAR2 ENCODE chr9:135866389-135866480
64251 chr17 40765719 40765719 1 + C A BLCA 40765718 + 40765698 40765738 41 GCCACAGACCGCCTGCACATCCAGAACCCATCCTTCTCCCA GCCACAGACCGCCTGCACATCAAGAACCCATCCTTCTCCCA < 41bp 0.616894083776104 0.834769437512348 0.06911442 0.08497143 prediction 0.435750707472489 Functional Gain - TUBG1 ENSG00000131462 CDS Human protein_coding chr17:40765718 chr17:40765719 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_120693 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:40765698-40765744
64251 chr7 73604618 73604618 1 + C A THCA 73604617 + 73604597 73604637 41 TCTAGAGGTGGATGGGATTCCCGGGATGACTTCAATTCTGG TCTAGAGGTGGATGGGATTCCAGGGATGACTTCAATTCTGG < 41bp 0.609782703090409 0.827654870918469 0.62976015 0.86852837 prediction 0.43574433565612 Functional Gain - EIF4H ENSG00000106682 CDS Human protein_coding chr7:73604617 chr7:73604618 synonymous SNV . 0 22 hm5C_associated_SNPs_120694 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:73604599-73604624
64251 chr7 142564271 142564271 1 + C G SKCM 142564270 + 142564250 142564290 41 CCTGTGGTGCACCAGGTGAGCCGGGCATCCAACAGCATCAC CCTGTGGTGCACCAGGTGAGCGGGGCATCCAACAGCATCAC < 41bp 0.675360777975733 0.893231410531573 0.8689406 0.9142704 prediction 0.435741265111681 Functional Gain - EPHB6 ENSG00000106123 CDS Human protein_coding chr7:142564270 chr7:142564271 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120696 0 0 1 SF3B4 POSTAR2 ENCODE chr7:142564178-142564278
64251 chr9 140137954 140137954 1 + C A LUAD 140137953 + 140137933 140137973 41 GTACCAGCAGTACCAGGATGCCACAGCCGAGGAGGAGGGCG GTACCAGCAGTACCAGGATGCAACAGCCGAGGAGGAGGGCG < 41bp 0.467144366242389 0.717869779722119 0.30272043 0.23389706 prediction 0.435739559444238 Functional Gain - TUBB4B ENSG00000188229 CDS Human protein_coding chr9:140137953 chr9:140137954 synonymous SNV . 0 22 hm5C_associated_SNPs_120697 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:140137943-140138049
64251 chr18 3457605 3457605 1 + C A UCEC 3457604 + 3457584 3457624 41 ACTGTCTCCTAAGCCGTCATCCCCGGGATCAGTTTTGGCTC ACTGTCTCCTAAGCCGTCATCACCGGGATCAGTTTTGGCTC < 41bp 0.596103601261786 0.813960744339852 0.47603083 0.72617555 prediction 0.435714286156132 Functional Gain - TGIF1 ENSG00000177426 CDS Human protein_coding chr18:3457604 chr18:3457605 synonymous SNV . 0 22 hm5C_associated_SNPs_120701 0 0 8 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr18:3457587-3457608
64251 chr17 7557506 7557506 1 + C T HNSC 7557505 + 7557485 7557525 41 GACCCAGCTGGGCAACTGCTCCGGCATTGGGGACTCCACCC GACCCAGCTGGGCAACTGCTCTGGCATTGGGGACTCCACCC < 41bp 0.578343677342298 0.79619542601223 0.8955058 0.78374726 prediction 0.435703497339865 Functional Gain - ATP1B2 ENSG00000129244 CDS Human protein_coding chr17:7557505 chr17:7557506 synonymous SNV . 0 22 hm5C_associated_SNPs_120702 0 0 4 IGF2BP1 POSTAR2 ENCODE chr17:7557481-7557562
64251 chr11 77301379 77301379 1 + C A HNSC 77301378 + 77301358 77301398 41 GATGCTGGGGGGCATGTCCCCCGAGACGGGTGCGGTGAGGC GATGCTGGGGGGCATGTCCCCAGAGACGGGTGCGGTGAGGC < 41bp 0.61388354338348 0.831734677569714 0.315312 0.89255095 prediction 0.435702268372469 Functional Gain - AQP11 ENSG00000178301 CDS Human protein_coding chr11:77301378 chr11:77301379 synonymous SNV . 0 22 hm5C_associated_SNPs_120703 0 0 3 DDX3X POSTAR2 ENCODE chr11:77301368-77301391
64251 chr9 131285958 131285958 1 + C T UCEC 131285957 + 131285937 131285977 41 CGGAAGGAAGAAGGCCAGATCCGCCTGCGGGCCCTCTATGC CGGAAGGAAGAAGGCCAGATCTGCCTGCGGGCCCTCTATGC < 41bp 0.466886980153123 0.717845938308123 0.20999953 0.19461605 prediction 0.435691876616246 Functional Gain - GLE1 ENSG00000119392 CDS Human protein_coding chr9:131285957 chr9:131285958 nonsynonymous SNV 0.179 4 22 hm5C_associated_SNPs_120707 0 0 4 GRWD1 POSTAR2 ENCODE chr9:131285870-131286010
64251 chr1 167599533 167599533 1 + C A rs3738220 167599532 + 167599512 167599552 41 GCGCAGCCGGGCGCGCGCCACCGCCCACTCGCCCTGTGCCC GCGCAGCCGGGCGCGCGCCACAGCCCACTCGCCCTGTGCCC < 41bp 0.524482264342797 0.74232712734835 0.40576664 0.46426007 prediction 0.435689726011106 Functional Gain - RCSD1 ENSG00000241666 ncRNA_intronic Human antisense chr1:167599532 chr1:167599533 . . 0 22 hm5C_associated_SNPs_120708 0 0 2 DDX3X POSTAR2 ENCODE chr1:167599479-167599593
64251 chr9 101602320 101602320 1 + C T UCEC 101602319 + 101602299 101602339 41 GTGACAGAGAGGAAGCAGCTCCGGGACAAGCTCCAGTGTAA GTGACAGAGAGGAAGCAGCTCTGGGACAAGCTCCAGTGTAA < 41bp 0.566641287602958 0.784482695090514 0.70015717 0.57419235 prediction 0.435682814975111 Functional Gain - GALNT12 ENSG00000119514 CDS Human protein_coding chr9:101602319 chr9:101602320 nonsynonymous SNV 0.706 4 22 hm5C_associated_SNPs_120711 0 0 6 SRSF1 POSTAR2 ENCODE chr9:101602284-101602344
64251 chr16 67236560 67236560 1 + C T STAD 67236559 + 67236539 67236579 41 GTGGTGCGGGAGCAGCTGGCCCGCACTCTGGCCCTGAAGCC GTGGTGCGGGAGCAGCTGGCCTGCACTCTGGCCCTGAAGCC < 41bp 0.596746147517119 0.814586436091518 0.14115846 0.2586164 prediction 0.435680577148799 Functional Gain - ELMO3 ENSG00000102890 CDS Human protein_coding chr16:67236559 chr16:67236560 nonsynonymous SNV 0.963 4 22 hm5C_associated_SNPs_120712 0 0 4 EFTUD2 POSTAR2 ENCODE chr16:67236464-67236564
64251 chr4 109571833 109571833 1 + C T LUSC 109571832 + 109571812 109571852 41 ATGGAGACTTTGTACCGTGTCCCGTTCTTAGTGCTCGAATG ATGGAGACTTTGTACCGTGTCTCGTTCTTAGTGCTCGAATG < 41bp 0.509982931316139 0.727819426246089 0.07482344 0.13121015 prediction 0.4356729898599 Functional Gain - OSTC ENSG00000198856 CDS Human protein_coding chr4:109571832 chr4:109571833 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_120713 0 0 31 TARDBP POSTAR2 DRA001158,DRS012387 chr4:109571812-109571926
64251 chr6 7247239 7247239 1 + C G rs556832534 7247235 + 7247215 7247255 41 CCCCGGGTGCCGGGGAGGCCCCGGCGGAAAAGCTCGCGGAG CCCCGGGTGCCGGGGAGGCCCCGGGGGAAAAGCTCGCGGAG < 41bp 0.437665277354174 0.717835436997779 0.89722085 0.93604505 prediction 0.435670873995557 Functional Gain - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7247235 chr6:7247239 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_120714 0 0 5 BUD13 POSTAR2 ENCODE chr6:7247231-7247279
64251 chr6 26225646 26225646 1 + C T CESC 26225645 + 26225625 26225665 41 CGACCTGCGCTTCCAGAGTTCCGCGGTGATGGCGCTGCAGG CGACCTGCGCTTCCAGAGTTCTGCGGTGATGGCGCTGCAGG < 41bp 0.559160437099955 0.77698578022439 0.3647486 0.4483875 prediction 0.435650686248871 Functional Gain - HIST1H3E ENSG00000196966 CDS Human other chr6:26225645 chr6:26225646 synonymous SNV . 0 22 hm5C_associated_SNPs_120717 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:26225643-26225672
64251 chr6 7229936 7229936 1 + C A rs150527788 7229935 + 7229915 7229955 41 TCAACGCCCAGCAGGCTTCCCCGGGCTGTATCAGCCCCAGC TCAACGCCCAGCAGGCTTCCCAGGGCTGTATCAGCCCCAGC < 41bp 0.484187719672523 0.717810100735804 0.88632226 0.9350171 prediction 0.435620201471608 Functional Gain - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7229935 chr6:7229936 nonsynonymous SNV 0.527 3 22 hm5C_associated_SNPs_120720 0 0 6 EIF3G POSTAR2 GSE65004,GSM1585674 chr6:7229920-7229942
64251 chr19 2248561 2248561 1 + C T rs189717932 2248560 + 2248540 2248580 41 AACTGAGAAGCTGCTCCCTCCCCCAGCAAGCCCAGCGCCAG AACTGAGAAGCTGCTCCCTCCTCCAGCAAGCCCAGCGCCAG < 41bp 0.561761067294635 0.779546338154071 0.4050785 0.94585454 prediction 0.435570541718871 Functional Gain - SF3A2 ENSG00000104897 UTR3 Human protein_coding chr19:2248560 chr19:2248561 . . 0 22 hm5C_associated_SNPs_120727 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:2248536-2248636
64251 chr8 28610845 28610845 1 + C G rs10100385 28610844 + 28610824 28610864 41 GCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGA GCCGCCCCTGGCCACCTTGTCGTGGCTCGCAGGGTGCAGGA < 41bp 0.606771367051158 0.82454930116174 0.1263052 0.92527926 prediction 0.435555868221164 Functional Gain - EXTL3 ENSG00000012232 UTR3 Human protein_coding chr8:28610844 chr8:28610845 . . 0 22 hm5C_associated_SNPs_120733 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:28610840-28610860
64251 chr7 127344968 127344968 1 + C T SKCM 127344967 + 127344947 127344987 41 TGGTCGATTGCAGTTTACACCCGGGGCGCAGAAAAGCTGAG TGGTCGATTGCAGTTTACACCTGGGGCGCAGAAAAGCTGAG < 41bp 0.486307016409351 0.717775293850863 0.81121945 0.56634855 prediction 0.435550587701727 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127344967 chr7:127344968 nonsynonymous SNV 0.832 2 22 hm5C_associated_SNPs_120737 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:127344959-127344982
64251 chr7 6193600 6193600 1 + C T rs558287537 6193599 + 6193579 6193619 41 CGAGGAGCCTCCGCCCAGCGCCGGCGAGGACATCGTGGGGG CGAGGAGCCTCCGCCCAGCGCTGGCGAGGACATCGTGGGGG < 41bp 0.491863290344368 0.717773004428164 0.8549303 0.5392655 prediction 0.435546008856329 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193599 chr7:6193600 synonymous SNV . 0 22 hm5C_associated_SNPs_120738 0 0 1 FXR2 POSTAR2 ENCODE chr7:6193547-6193618
64251 chr19 34830825 34830825 1 + C T COAD 34830824 + 34830804 34830844 41 TGCTGCAGAGAAGCCTTGATCCTGAGAAGACCCTGGGTCTA TGCTGCAGAGAAGCCTTGATCTTGAGAAGACCCTGGGTCTA < 41bp 0.614560103775211 0.832333090491502 0.43587226 0.13253987 prediction 0.435545973432582 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34830824 chr19:34830825 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120739 0 0 1 BUD13 POSTAR2 ENCODE chr19:34830724-34830888
64251 chr7 148950765 148950765 1 + C T rs150306665 148950764 + 148950744 148950784 41 TTTCCTGAGCCCAGAGCAGACCGAACTCTGGGGTGGTCAGG TTTCCTGAGCCCAGAGCAGACTGAACTCTGGGGTGGTCAGG < 41bp 0.550961031846081 0.768729546713815 0.27988285 0.37138256 prediction 0.435537029735468 Functional Gain - ZNF212 ENSG00000170260 CDS Human protein_coding chr7:148950764 chr7:148950765 synonymous SNV . 0 22 hm5C_associated_SNPs_120740 0 0 1 RBM15 POSTAR2 ENCODE chr7:148950728-148950768
64251 chr14 24112384 24112384 1 + C T KIRC 24112383 + 24112363 24112403 41 CCTAAGTGTGAACGTGAAGTCCCCAGCCCTGCTGCTGAGCC CCTAAGTGTGAACGTGAAGTCTCCAGCCCTGCTGCTGAGCC < 41bp 0.599018223994369 0.816761417121041 0.090589434 0.94809175 prediction 0.435486386253344 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24112383 chr14:24112384 synonymous SNV . 0 22 hm5C_associated_SNPs_120749 0 0 12 BUD13 POSTAR2 ENCODE chr14:24112339-24112422
64251 chr10 102743421 102743421 1 + C A PAAD 102743417 + 102743397 102743437 41 CTCTATGTGCTAGCCATTGCCGCGCTTGGTGGCCTCTGCCT CTCTATGTGCTAGCCATTGCCGCGATTGGTGGCCTCTGCCT < 41bp 0.719110349526135 0.936853264168327 0.69145554 0.9423721 prediction 0.435485829284384 Functional Gain - SEMA4G ENSG00000095539 CDS Human protein_coding chr10:102743417 chr10:102743421 nonsynonymous SNV 0.909 2 25 hm5C_associated_SNPs_120750 0 0 1 RBM15 POSTAR2 ENCODE chr10:102743405-102743458
64251 chr15 75074508 75074508 1 + C G rs528173704 75074507 + 75074487 75074527 41 GAGGTTGGCCGCCGCCGCCGCCGAGCCCGCTGCCGCCCTCC GAGGTTGGCCGCCGCCGCCGCGGAGCCCGCTGCCGCCCTCC < 41bp 0.657122606266473 0.874863366833857 0.88611615 0.90439665 prediction 0.435481521134768 Functional Gain - CSK ENSG00000103653 UTR5 Human protein_coding chr15:75074507 chr15:75074508 . . 0 22 hm5C_associated_SNPs_120751 0 0 5 DDX3X POSTAR2 ENCODE chr15:75074463-75074524
64251 chr20 35827572 35827572 1 + C T HNSC 35827571 + 35827551 35827591 41 CTTTGGCCTTCCCTTGGCATCCCAAGAAGCACTCAGTGCCC CTTTGGCCTTCCCTTGGCATCTCAAGAAGCACTCAGTGCCC < 41bp 0.621776273403027 0.839510640987116 0.24935028 0.8231533 prediction 0.435468735168178 Functional Gain - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35827571 chr20:35827572 synonymous SNV . 0 22 hm5C_associated_SNPs_120754 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:35827544-35827573
64251 chr20 2636735 2636735 1 + T G rs530237387 2636733 + 2636713 2636753 41 GCCACTTCTGGTGCCCACTGCTTGTTGGGGGATCACGGTGA GCCACTTCTGGTGCCCACTGCTGGTTGGGGGATCACGGTGA < 41bp 0.37642116741742 0.717731599159236 0.19633368 0.34210008 prediction 0.435463198318472 Functional Gain - NOP56 ENSG00000101361 intronic Human protein_coding chr20:2636733 chr20:2636735 . . 0 23 hm5C_associated_SNPs_120755 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:2636596-2636945
64251 chr22 18209790 18209790 1 + C T OV 18209789 + 18209769 18209809 41 CGTGGAGAAAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTG CGTGGAGAAAGAAGAGGTGCCTGAGGGCATGGAAGAGGCTG < 41bp 0.514649614135882 0.732381123093358 0.2574548 0.29712903 prediction 0.435463017914954 Functional Gain - BCL2L13 ENSG00000099968 CDS Human protein_coding chr22:18209789 chr22:18209790 synonymous SNV . 0 22 hm5C_associated_SNPs_120756 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr22:18209777-18209806
64251 chr11 58893520 58893520 1 + A G LUSC 58893517 + 58893497 58893537 41 ACTTGTTTCTCTGATGGGTCCTCAGGCTCCCCAGTGTTTAA ACTTGTTTCTCTGATGGGTCCTCGGGCTCCCCAGTGTTTAA < 41bp 0.477997374577482 0.71772989323112 0.02368915 0.035316616 prediction 0.435459786462239 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58893517 chr11:58893520 synonymous SNV . 0 24 hm5C_associated_SNPs_120758 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:58893495-58893528
64251 chr16 89661997 89661997 1 + C T SKCM 89661996 + 89661976 89662016 41 ATCGTACAGTTCGTGCCCTTCCGGGAGCTCAAGAACGTGAG ATCGTACAGTTCGTGCCCTTCTGGGAGCTCAAGAACGTGAG < 41bp 0.589269849511863 0.806999101336233 0.91976184 0.8326112 prediction 0.435458503648742 Functional Gain - CPNE7 ENSG00000178773 CDS Human protein_coding chr16:89661996 chr16:89661997 nonsynonymous SNV 0.966 4 22 hm5C_associated_SNPs_120759 0 0 1 RBM15 POSTAR2 ENCODE chr16:89661990-89662019
64251 chr15 67818823 67818823 1 + C A UCEC 67818822 + 67818802 67818842 41 AGTCACAGAGACTGTGCATACCAGTTATGGACCCATAACAG AGTCACAGAGACTGTGCATACAAGTTATGGACCCATAACAG < 41bp 0.471131470007008 0.717727982947989 0.03828922 0.02585569 prediction 0.435455965895978 Functional Gain - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67818822 chr15:67818823 synonymous SNV . 0 22 hm5C_associated_SNPs_120760 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:67818809-67818830
64251 chr12 65639998 65639998 1 + C T SKCM 65639997 + 65639977 65640017 41 AGATACCACCATCGCTTTCCCCAGGCTCTCACTTCCAACAC AGATACCACCATCGCTTTCCCTAGGCTCTCACTTCCAACAC < 41bp 0.477160291516077 0.717724145315305 0.46986976 0.14854205 prediction 0.435448290630609 Functional Gain - LEMD3 ENSG00000174106 CDS Human protein_coding chr12:65639997 chr12:65639998 stopgain 0.979 1 22 hm5C_associated_SNPs_120762 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:65639966-65640001
64251 chr2 26411373 26411373 1 + C A rs190642019 26411372 + 26411352 26411392 41 GCTGGGGGCACCACTGTGTACCTGGGCCCAGTAAGGCATTT GCTGGGGGCACCACTGTGTACATGGGCCCAGTAAGGCATTT < 41bp 0.448910748263203 0.717723265648642 0.06507048 0.27096075 prediction 0.435446531297283 Functional Gain - GAREM2 ENSG00000157833 UTR3 Human protein_coding chr2:26411372 chr2:26411373 . . 0 22 hm5C_associated_SNPs_120763 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:26411346-26411384
64251 chr2 62933070 62933070 1 + T C rs534218370 62933068 + 62933048 62933088 41 CGTGGCTGGCTTGGCTGTTCCATGTGGCTCCGGCGGGGATG CGTGGCTGGCTTGGCTGTTCCACGTGGCTCCGGCGGGGATG < 41bp 0.556083760882706 0.773783607389232 0.58116287 0.60514903 prediction 0.435399693013053 Functional Gain - EHBP1 ENSG00000115504 UTR5 Human protein_coding chr2:62933068 chr2:62933070 . . 0 23 hm5C_associated_SNPs_120773 0 0 5 CDC40 POSTAR2 ENCODE chr2:62933064-62933136
64251 chr17 39847765 39847765 1 + C A rs9890480 39847761 + 39847741 39847781 41 TCATGTAGCTAGCTGTAGAGCTTGCAACTTAATAGCAGCAG TCATGTAGCTAGCTGTAGAGCTTGAAACTTAATAGCAGCAG < 41bp 0.378949597982275 0.717694275630756 0.1334011 0.11235231 prediction 0.435388551261512 Functional Gain - EIF1 ENSG00000173812 UTR3 Human protein_coding chr17:39847761 chr17:39847765 . . 0 25 hm5C_associated_SNPs_120774 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:39847276-39847783
64251 chr12 56622893 56622893 1 + C T UCEC 56622892 + 56622872 56622912 41 CCCTCCCACCCACCCAGCACCCGAATCACTCGAAGCCAGCC CCCTCCCACCCACCCAGCACCTGAATCACTCGAAGCCAGCC < 41bp 0.59871032405524 0.816404481911989 0.027969927 0.030421346 prediction 0.435388315713498 Functional Gain - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56622892 chr12:56622893 stopgain 0.994 0 22 hm5C_associated_SNPs_120775 0 0 1 IGF2BP1 POSTAR2 ENCODE chr12:56622891-56622961
64251 chr13 88330384 88330384 1 + C T STAD 88330383 + 88330363 88330403 41 GGGACAGCAGGCTACGGGAACCGGTGCTCTACAGCCCCCCG GGGACAGCAGGCTACGGGAACTGGTGCTCTACAGCCCCCCG < 41bp 0.526894917802882 0.744585145954732 0.69685304 0.37191206 prediction 0.435380456303699 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88330383 chr13:88330384 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_120777 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr13:88330380-88330400
64251 chr8 19677964 19677964 1 + T A ESCA 19677960 + 19677940 19677980 41 GTCACGGAACAATGCTTCAACACGTTAGAACGATCAGAAAT GTCACGGAACAATGCTTCAACACGATAGAACGATCAGAAAT < 41bp 0.687113517421311 0.904801322479327 0.05253184 0.048931837 prediction 0.435375610116031 Functional Gain - INTS10 ENSG00000104613 CDS Human protein_coding chr8:19677960 chr8:19677964 nonsynonymous SNV 0.952 3 25 hm5C_associated_SNPs_120778 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:19677902-19677969
64251 chr6 27265833 27265833 1 + T A rs560864128 27265829 + 27265809 27265849 41 CTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCCACC CTAATCCATTGTGCTCTGCACGCGAGGGTTCGAATCCCACC < 41bp 0.635007438718567 0.852693703541511 0.20500594 0.22743624 prediction 0.435372529645887 Functional Gain - PRSS16;POM121L2 ENSG00000158553 intronic Human protein_coding chr6:27265829 chr6:27265833 . . 0 25 hm5C_associated_SNPs_120779 0 0 50 NUDT21 POSTAR2 GSE37401,GSM917662 chr6:27265800-27265860
64251 chr2 86716534 86716534 1 + C T SKCM 86716533 + 86716513 86716553 41 TCATGGTCTATGTGGGAATTCCCAAAGGACAGTGTGAGCAA TCATGGTCTATGTGGGAATTCTCAAAGGACAGTGTGAGCAA < 41bp 0.445747518191863 0.717683711191694 0.10215083 0.84766084 prediction 0.435367422383387 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86716533 chr2:86716534 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120781 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:86716504-86716542
64251 chr9 135932268 135932268 1 + C T COAD 135932267 + 135932247 135932287 41 GACACCATGTCCCTCATGATCCGGCAGACCATCCGCTCCAA GACACCATGTCCCTCATGATCTGGCAGACCATCCGCTCCAA < 41bp 0.597766847613695 0.815444798387267 0.4048666 0.31729555 prediction 0.435355901547145 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135932267 chr9:135932268 nonsynonymous SNV 0.860 1 22 hm5C_associated_SNPs_120787 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr9:135932252-135932276
64251 chr11 35685211 35685211 1 + T C rs146343301 35685209 + 35685189 35685229 41 GGAAGTGTCCGGACCATGGGCTTGATTTGAGTACCTATTGC GGAAGTGTCCGGACCATGGGCTCGATTTGAGTACCTATTGC < 41bp 0.633497035123756 0.851169833819167 0.19487476 0.22215122 prediction 0.435345597390822 Functional Gain - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35685209 chr11:35685211 synonymous SNV . 0 23 hm5C_associated_SNPs_120789 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:35685164-35685219
64251 chr17 78219033 78219033 1 + C G rs373604987 78219032 + 78219012 78219052 41 GGCTCCCTCGTCTCCTCCTACCCGGTCACAGGCAGCTTTGG GGCTCCCTCGTCTCCTCCTACGCGGTCACAGGCAGCTTTGG < 41bp 0.381241308638712 0.717671134110245 0.09736991 0.30246168 prediction 0.43534226822049 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78219032 chr17:78219033 nonsynonymous SNV 0.359 5 22 hm5C_associated_SNPs_120790 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:78219011-78219055
64251 chr8 98656430 98656430 1 + C G rs116862822 98656426 + 98656406 98656446 41 CGGCCCAAGCCGCCATTGTTCCGCCGAGGGAGGACAGCGGG CGGCCCAAGCCGCCATTGTTCCGCGGAGGGAGGACAGCGGG < 41bp 0.628678268316733 0.846346444700319 0.75951594 0.91095036 prediction 0.435336352767173 Functional Gain - MTDH ENSG00000147649 UTR5 Human protein_coding chr8:98656426 chr8:98656430 . . 0 25 hm5C_associated_SNPs_120791 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:98656420-98656440
64251 chr19 48959278 48959278 1 + C G rs28709275 48959274 + 48959254 48959294 41 CAGGAGGCCTGGGTGGGAGGCTAGCTTTTGCCACTCCTCTC CAGGAGGCCTGGGTGGGAGGCTAGGTTTTGCCACTCCTCTC < 41bp 0.615825516405194 0.833485626160615 0.8762257 0.90240514 prediction 0.435320219510842 Functional Gain - KCNJ14 ENSG00000105447 UTR3 Human protein_coding chr19:48959274 chr19:48959278 . . 0 25 hm5C_associated_SNPs_120795 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr19:48959236-48959278
64251 chr15 79614407 79614407 1 + C T ESCA 79614406 + 79614386 79614426 41 CGGCTGCGGGAGGCCCAGGACCGGGCCCGAGCAGAAGACCT CGGCTGCGGGAGGCCCAGGACTGGGCCCGAGCAGAAGACCT < 41bp 0.553093533625005 0.770749949509438 0.8828965 0.5766978 prediction 0.435312831768867 Functional Gain - TMED3 ENSG00000166557 CDS Human protein_coding chr15:79614406 chr15:79614407 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120797 0 0 1 SND1 POSTAR2 ENCODE chr15:79614371-79614430
64251 chr19 39870622 39870622 1 + A G HNSC 39870619 + 39870599 39870639 41 ATTCTAGGCTTTCACGGAGACGCAGAAGAAACGGCTGCTAT ATTCTAGGCTTTCACGGAGACGCGGAAGAAACGGCTGCTAT < 41bp 0.55582862054044 0.773481102167508 0.33978897 0.49668545 prediction 0.435304963254137 Functional Gain - SAMD4B ENSG00000179134 CDS Human protein_coding chr19:39870619 chr19:39870622 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_120800 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr19:39870622-39870623
64251 chr1 24078940 24078940 1 + C G rs550252 24078936 + 24078916 24078956 41 TGTTGCCAGACCTCCCGTTACCCGCGATACAGGCCAATTAC TGTTGCCAGACCTCCCGTTACCCGGGATACAGGCCAATTAC < 41bp 0.423038415774973 0.717651473182347 0.4422992 0.9039625 prediction 0.435302946364695 Functional Gain - ELOA ENSG00000011007 CDS Human protein_coding chr1:24078936 chr1:24078940 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_120801 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr1:24078904-24078993
64251 chr1 90399271 90399271 1 + A G SARC 90399268 + 90399248 90399288 41 TTGGACGACAAAAGCGTTGTCTGAGACAGCATGCGAAGACT TTGGACGACAAAAGCGTTGTCTGGGACAGCATGCGAAGACT < 41bp 0.490415285592465 0.717647893952124 0.25170362 0.40575677 prediction 0.435295787904247 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90399268 chr1:90399271 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_120805 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:90399261-90399295
64251 chr1 201952182 201952182 1 + T G rs557054580 201952179 + 201952159 201952199 41 TGTGCGTGTCCTTCCCGCAGCCCTGCCGCGCCGCCGAGCGC TGTGCGTGTCCTTCCCGCAGCCCGGCCGCGCCGCCGAGCGC < 41bp 0.314846803929624 0.71763711919564 0.111302346 0.15676957 prediction 0.43527423839128 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201952179 chr1:201952182 nonsynonymous SNV 0.391 0 24 hm5C_associated_SNPs_120814 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:201952166-201952191
64251 chr9 127631476 127631476 1 + C A rs535215872 127631475 + 127631455 127631495 41 TGCTGGGAGCAGCCGGGCAGCCGCTTCCCGCCCCCGAGCAG TGCTGGGAGCAGCCGGGCAGCAGCTTCCCGCCCCCGAGCAG < 41bp 0.543619332542808 0.761245082407374 0.1510978 0.19572675 prediction 0.435251499729131 Functional Gain - ARPC5L ENSG00000136950 UTR5 Human protein_coding chr9:127631475 chr9:127631476 . . 0 22 hm5C_associated_SNPs_120817 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:127631451-127631485
64251 chr2 198415083 198415083 1 + T C UCEC 198415081 + 198415061 198415101 41 TATTTTCACATGCTTATTTTCATCATCGGCAGATATTTGAT TATTTTCACATGCTTATTTTCACCATCGGCAGATATTTGAT < 41bp 0.421456741746718 0.717621997444764 0.047946453 0.036322385 prediction 0.435243994889527 Functional Gain - HSPE1-MOB4;MOB4 ENSG00000115540;ENSG00000270757 CDS Human other chr2:198415081 chr2:198415083 synonymous SNV . 0 23 hm5C_associated_SNPs_120818 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:198415026-198415091
64251 chr1 171759754 171759754 1 + T G COAD 171759752 + 171759732 171759772 41 CTGAGAAACCCAGAGCTACTCCTAGGTGAGAGAGATGCCAC CTGAGAAACCCAGAGCTACTCCGAGGTGAGAGAGATGCCAC < 41bp 0.365216684884507 0.717621553129724 0.72622883 0.9229812 prediction 0.435243106259448 Functional Gain - METTL13 ENSG00000010165 CDS Human protein_coding chr1:171759752 chr1:171759754 nonsynonymous SNV 0.238 1 23 hm5C_associated_SNPs_120819 0 0 1 PRPF8 POSTAR2 ENCODE chr1:171759748-171759788
64251 chr11 61563301 61563301 1 + C G CESC 61563300 + 61563280 61563320 41 CATCCCTTATCTTGATGCACCCAGTGAGGCAGAGGCCAGCT CATCCCTTATCTTGATGCACCGAGTGAGGCAGAGGCCAGCT < 41bp 0.388582716859547 0.717620108110465 0.07443917 0.35207832 prediction 0.43524021622093 Functional Gain - FEN1 ENSG00000168496 CDS Human protein_coding chr11:61563300 chr11:61563301 synonymous SNV . 0 22 hm5C_associated_SNPs_120820 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:61563270-61563303
64251 chr3 9512293 9512293 1 + C T SKCM 9512292 + 9512272 9512312 41 CCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGG CCCACTTCTGAGACTGGTTTCTCAAGCAGAAGTGGAGATGG < 41bp 0.456017184002586 0.717619457070613 0.1367763 0.1388092 prediction 0.435238914141227 Functional Gain - SETD5 ENSG00000168137 CDS Human protein_coding chr3:9512292 chr3:9512293 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_120821 0 0 10 MOV10 POSTAR2 GSE37524,GSM921128 chr3:9512270-9512297
64251 chr22 45944612 45944612 1 + C T UCEC 45944611 + 45944591 45944631 41 TACAGGCTGGCCCCCAATGGCCGCAACTGCCAAGGTGAGCA TACAGGCTGGCCCCCAATGGCTGCAACTGCCAAGGTGAGCA < 41bp 0.609380560300749 0.826999739558489 0.37405008 0.48321697 prediction 0.435238358515478 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45944611 chr22:45944612 nonsynonymous SNV 0.962 5 22 hm5C_associated_SNPs_120822 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:45944590-45944621
64251 chr4 74274451 74274451 1 + C T SKCM 74274450 + 74274430 74274470 41 AGATGACAACCCAAACCTCCCCCGATTGGTGAGACCAGAGG AGATGACAACCCAAACCTCCCTCGATTGGTGAGACCAGAGG < 41bp 0.600932650141192 0.818546494010111 0.014340401 0.3726833 prediction 0.435227687737837 Functional Gain - ALB ENSG00000163631 CDS Human protein_coding chr4:74274450 chr4:74274451 synonymous SNV . 0 22 hm5C_associated_SNPs_120823 0 0 5 DHX30 POSTAR2 ENCODE chr4:74274451-74274485
64251 chr19 16611989 16611989 1 + A G UCEC 16611986 + 16611966 16612006 41 GACCGCCGATGCTGGTCTTCCAAAGAGAGCTGACAGAATCC GACCGCCGATGCTGGTCTTCCAAGGAGAGCTGACAGAATCC < 41bp 0.475828257945237 0.717613813001996 0.29653645 0.5517335 prediction 0.435227626003991 Functional Gain - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16611986 chr19:16611989 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_120824 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:16611987-16612007
64251 chr12 68042946 68042946 1 + C G rs200090077 68042942 + 68042922 68042962 41 CAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGACCG CAGGAAACCTTCGGCCGCCGCTCCGGCCGCCTACCCGACCG < 41bp 0.64340646942401 0.861013759891475 0.19370809 0.23489806 prediction 0.43521458093493 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68042942 chr12:68042946 synonymous SNV . 0 25 hm5C_associated_SNPs_120829 0 0 1 BUD13 POSTAR2 ENCODE chr12:68042924-68042988
64251 chr7 17338392 17338392 1 + C G rs530047603 17338391 + 17338371 17338411 41 GAGCAGCCGGGACTGGTGGCCCGCGCCCGAGCTCCGCAGGC GAGCAGCCGGGACTGGTGGCCGGCGCCCGAGCTCCGCAGGC < 41bp 0.647456866623043 0.865041605225412 0.365097 0.8773738 prediction 0.435169477204739 Functional Gain - AHR ENSG00000237773 ncRNA_intronic Human antisense chr7:17338391 chr7:17338392 . . 0 22 hm5C_associated_SNPs_120837 0 0 3 DDX3X POSTAR2 ENCODE chr7:17338378-17338412
64251 chrX 64959702 64959702 1 + C T KIRC 64959701 + 64959681 64959721 41 GACAAATACAAGACCCTGCGCCAGATCCGGCAGGGCAACAC GACAAATACAAGACCCTGCGCTAGATCCGGCAGGGCAACAC < 41bp 0.464788476935938 0.717559660885449 0.57484645 0.27170858 prediction 0.435119321770899 Functional Gain - MSN ENSG00000147065 CDS Human protein_coding chrX:64959701 chrX:64959702 stopgain 1.000 1 22 hm5C_associated_SNPs_120846 0 0 1 RPS3 POSTAR2 ENCODE chrX:64959659-64959719
64251 chr12 111885191 111885191 1 + C G OV 111885187 + 111885167 111885207 41 GCCAGAAGACGGACCATTTCCTGTCCTGCTACCCCTGGTTC GCCAGAAGACGGACCATTTCCTGTGCTGCTACCCCTGGTTC < 41bp 0.414299470509324 0.717540735958255 0.108329386 0.20129839 prediction 0.43508147191651 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111885187 chr12:111885191 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_120852 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:111885189-111885204
64251 chr12 72167766 72167766 1 + A G STAD 72167763 + 72167743 72167783 41 AAAACTGGGTCAAAGAATTACGGAAAATGTTGGGAAATGAA AAAACTGGGTCAAAGAATTACGGGAAATGTTGGGAAATGAA < 41bp 0.500179733206073 0.717711784589973 0.25795877 0.39369422 prediction 0.435064102767801 Functional Gain - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72167763 chr12:72167766 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_120854 0 0 8 CSTF2 POSTAR2 GSE37401,GSM917676 chr12:72167746-72167782
64251 chr5 110428167 110428167 1 + T C UCEC 110428165 + 110428145 110428185 41 CGCGGCGGCAATGGAACGGGCCTCAGAAAGGCGCACGGCCA CGCGGCGGCAATGGAACGGGCCCCAGAAAGGCGCACGGCCA < 41bp 0.462244943125422 0.717531870987383 0.43558848 0.38454425 prediction 0.435063741974767 Functional Gain - WDR36 ENSG00000134987 CDS Human protein_coding chr5:110428165 chr5:110428167 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_120855 0 0 7 DDX3X POSTAR2 ENCODE chr5:110428039-110428268
64251 chr11 396954 396954 1 + C G PRAD 396953 + 396933 396973 41 GGCCGCTGGGTACGGGGGTGCCCAGCCCACCCCTCCCATGC GGCCGCTGGGTACGGGGGTGCGCAGCCCACCCCTCCCATGC < 41bp 0.394517818370865 0.717530764148318 0.20450309 0.28905293 prediction 0.435061528296636 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:396953 chr11:396954 synonymous SNV . 0 22 hm5C_associated_SNPs_120856 0 0 3 AGGF1 POSTAR2 ENCODE chr11:396936-396962
64251 chr9 130583634 130583634 1 + T C rs564392930 130583632 + 130583612 130583652 41 AGGCACAAGAATCGCTTGAACCTGAGAGGAGGAGGCTGCAG AGGCACAAGAATCGCTTGAACCCGAGAGGAGGAGGCTGCAG < 41bp 0.529090983923959 0.746616878797845 0.12476432 0.062546074 prediction 0.435051789747771 Functional Gain - LOC102723566 ENSG00000225032 ncRNA_exonic Human antisense chr9:130583632 chr9:130583634 . . 0 23 hm5C_associated_SNPs_120863 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130583617-130583650
64251 chrX 140995733 140995733 1 + A G LUSC 140995730 + 140995710 140995750 41 GAGTCTTTCCAAGAGTTCCCCTGAGAGTCCTCTCCAGAGTC GAGTCTTTCCAAGAGTTCCCCTGGGAGTCCTCTCCAGAGTC < 41bp 0.456678414294335 0.717522387075099 0.07738331 0.40367663 prediction 0.435044774150197 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995730 chrX:140995733 nonsynonymous SNV 0.011 1 24 hm5C_associated_SNPs_120865 0 0 1 HNRNPK POSTAR2 ENCODE chrX:140995692-140995799
64251 chr19 57743956 57743956 1 + C T SKCM 57743955 + 57743935 57743975 41 AACTATTTCCATGATGCACGCCGGGTGTACCTGATTCTGGA AACTATTTCCATGATGCACGCTGGGTGTACCTGATTCTGGA < 41bp 0.580521717532048 0.798034513556809 0.35439694 0.15866345 prediction 0.435025592049521 Functional Gain - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743955 chr19:57743956 nonsynonymous SNV 0.001 4 22 hm5C_associated_SNPs_120868 0 0 1 ZNF622 POSTAR2 ENCODE chr19:57743948-57744043
64251 chr7 150761667 150761667 1 + C T SKCM 150761666 + 150761646 150761686 41 CACTGTCCACCCACCTGCCTCCGGATGCACGCCGCCGCAAG CACTGTCCACCCACCTGCCTCTGGATGCACGCCGCCGCAAG < 41bp 0.601186087724353 0.818697023762809 0.75424826 0.23283833 prediction 0.435021872076911 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761666 chr7:150761667 nonsynonymous SNV 0.975 1 22 hm5C_associated_SNPs_120869 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr7:150761623-150761672
64251 chr2 176988730 176988730 1 + C A UCEC 176988729 + 176988709 176988749 41 CGCTGTCCCTACACCAAATACCAGACGCTTGAGCTGGAGAA CGCTGTCCCTACACCAAATACAAGACGCTTGAGCTGGAGAA < 41bp 0.461807817117808 0.717500258457083 0.36670214 0.713514 prediction 0.435000516914166 Functional Gain - HOXD9 ENSG00000128709 CDS Human protein_coding chr2:176988729 chr2:176988730 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_120871 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:176988695-176988733
64251 chr17 4442931 4442931 1 - G A rs62620242 4442932 - 4442912 4442952 41 CCAAAACTGCAGAAGAAAAACCAGAAGCCGTCCCAGGTGAA CCAAAACTGCAGAAGAAAAACTAGAAGCCGTCCCAGGTGAA < 41bp 0.585871847231026 0.803370452403625 0.5758711 0.8485856 prediction 0.434997210345198 Functional Gain - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4442932 chr17:4442931 stopgain 0.008 0 22 hm5C_associated_SNPs_120874 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:4442908-4442940
64251 chr19 47774772 47774772 1 + T A rs888836 47774768 + 47774748 47774788 41 CCTTCAGTCCGGAGGAGCCCCTGCTGGAGCCCCAGGCCCCT CCTTCAGTCCGGAGGAGCCCCTGCAGGAGCCCCAGGCCCCT < 41bp 0.676491370551937 0.893986548312337 0.23488802 0.5807836 prediction 0.4349903555208 Functional Gain - CCDC9 ENSG00000105321 CDS Human protein_coding chr19:47774768 chr19:47774772 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_120876 0 0 2 UPF1 POSTAR2 ENCODE chr19:47774731-47774835
64251 chr6 72011297 72011297 1 + C T LGG 72011296 + 72011276 72011316 41 AGAAAGCTCCTGCGGTTCGCCCAGAAACACTACACGCCTTC AGAAAGCTCCTGCGGTTCGCCTAGAAACACTACACGCCTTC < 41bp 0.590535917962387 0.808020415695802 0.013813823 0.0424878 prediction 0.43496899546683 Functional Gain - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72011296 chr6:72011297 stopgain 0.993 1 22 hm5C_associated_SNPs_120879 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:72011287-72011311
64251 chr19 39888238 39888238 1 + A G UCEC 39888235 + 39888215 39888255 41 ACCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAAGGAC ACCTGGCGGTCATCAAAGCCCAGGTTTCCTGTGCCAAGGAC < 41bp 0.561543329397108 0.779025117220032 0.1335522 0.2659883 prediction 0.434963575645847 Functional Gain - MED29 ENSG00000063322 CDS Human protein_coding chr19:39888235 chr19:39888238 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_120881 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:39888217-39888240
64251 chr8 145066086 145066086 1 + C A OV 145066082 + 145066062 145066102 41 CCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTC CCTTGCAGCTGTCGGTGACCCTGTACACGGTGTCTGTGTTC < 41bp 0.291451008415166 0.717479536675784 0.11875835 0.11501822 prediction 0.434959073351568 Functional Gain - GRINA ENSG00000178719 CDS Human protein_coding chr8:145066082 chr8:145066086 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_120883 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr8:145066048-145066090
64251 chr12 123333379 123333379 1 + C A PRAD 123333378 + 123333358 123333398 41 CAGCGGTACCGCAGCAACATCCGGGAGATTGGAGACCTGTG CAGCGGTACCGCAGCAACATCAGGGAGATTGGAGACCTGTG < 41bp 0.440488630819964 0.717477808744433 0.89547527 0.90910816 prediction 0.434955617488866 Functional Gain - HIP1R ENSG00000130787 CDS Human protein_coding chr12:123333378 chr12:123333379 synonymous SNV . 0 22 hm5C_associated_SNPs_120884 0 0 2 PPIG POSTAR2 ENCODE chr12:123333358-123333395
64251 chr1 228363178 228363178 1 + A G LUAD 228363175 + 228363155 228363195 41 GGTGCCCAGGTGGCCTTAGCCGCATCTGTGCCAGACTGGTG GGTGCCCAGGTGGCCTTAGCCGCGTCTGTGCCAGACTGGTG < 41bp 0.564161038721308 0.78162783121663 0.42844078 0.79127026 prediction 0.434933584990644 Functional Gain - IBA57 ENSG00000181873 CDS Human protein_coding chr1:228363175 chr1:228363178 synonymous SNV . 0 24 hm5C_associated_SNPs_120885 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:228363152-228363198
64251 chr15 39874669 39874669 1 + C T SKCM 39874668 + 39874648 39874688 41 GAGCGGAAAGACCACTCTGGCCAGGTCTTCAGCGTGGTGTC GAGCGGAAAGACCACTCTGGCTAGGTCTTCAGCGTGGTGTC < 41bp 0.583176144821586 0.800642154865161 0.38127762 0.108113945 prediction 0.434932020087149 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874668 chr15:39874669 stopgain 0.999 0 22 hm5C_associated_SNPs_120886 0 0 1 SND1 POSTAR2 ENCODE chr15:39874612-39874669
64251 chr20 47895198 47895198 1 + C G rs479473 47895197 + 47895177 47895217 41 TTCTTTCGCGTCTGCGGTGCCCGGAGTGTGGTACTTCTCCT TTCTTTCGCGTCTGCGGTGCCGGGAGTGTGGTACTTCTCCT < 41bp 0.654682659149083 0.872148277500162 0.828518 0.90267456 prediction 0.434931236702159 Functional Gain - ZFAS1 ENSG00000177410 ncRNA_exonic Human antisense chr20:47895197 chr20:47895198 . . 0 22 hm5C_associated_SNPs_120887 0 0 31 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47895184-47895201
64251 chr2 114356271 114356271 1 + C T UCEC 114356270 + 114356250 114356290 41 CCATCCCTCCTCTGCCGCCACCGCAGCAGCCACAGGCAGAG CCATCCCTCCTCTGCCGCCACTGCAGCAGCCACAGGCAGAG < 41bp 0.541591696549245 0.759056244257252 0.10024205 0.106128186 prediction 0.434929095416014 Functional Gain - WASH2P ENSG00000146556 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr2:114356270 chr2:114356271 . . 0 22 hm5C_associated_SNPs_120888 0 0 1 RBM15 POSTAR2 ENCODE chr2:114356237-114356271
64251 chr16 28602125 28602125 1 + C T SKCM 28602124 + 28602104 28602144 41 CTGAGCCGGCGCCGTGTCATCCCGCTGCCCCAGTGGAAGGC CTGAGCCGGCGCCGTGTCATCTCGCTGCCCCAGTGGAAGGC < 41bp 0.617968187539318 0.835430968721019 0.3560291 0.4355196 prediction 0.434925562363403 Functional Gain - SGF29 ENSG00000176476 CDS Human protein_coding chr16:28602124 chr16:28602125 nonsynonymous SNV 0.953 4 22 hm5C_associated_SNPs_120889 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr16:28602125-28602126
64251 chr12 123014649 123014649 1 + C T OV 123014648 + 123014628 123014668 41 GCTGCTAACAAATGATGATACCGGAAGTGGGTACCTGAGTG GCTGCTAACAAATGATGATACTGGAAGTGGGTACCTGAGTG < 41bp 0.542360782847177 0.75981727717595 0.6565052 0.4100942 prediction 0.434912988657546 Functional Gain - KNTC1 ENSG00000184445 CDS Human protein_coding chr12:123014648 chr12:123014649 synonymous SNV . 0 22 hm5C_associated_SNPs_120894 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:123014587-123014687
64251 chr1 45115339 45115339 1 + C T GBM 45115338 + 45115318 45115358 41 CCTTCCTTTTTACAGAATCACCGAAGATTCAGCTGTGACCA CCTTCCTTTTTACAGAATCACTGAAGATTCAGCTGTGACCA < 41bp 0.462883579959653 0.717441454005005 0.018927723 0.045322508 prediction 0.43488290801001 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:45115338 chr1:45115339 synonymous SNV . 0 22 hm5C_associated_SNPs_120898 0 0 3 EFTUD2 POSTAR2 ENCODE chr1:45115331-45115378
64251 chr19 2810711 2810711 1 + C T UCEC 2810710 + 2810690 2810730 41 CACGCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGC CACGCAGACGGACGCAGACCCTGCCGAGGAGTATGCGCGGC < 41bp 0.465376970641563 0.717440329545967 0.20525843 0.15901741 prediction 0.434880659091935 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810710 chr19:2810711 synonymous SNV . 0 22 hm5C_associated_SNPs_120900 0 0 5 MTPAP POSTAR2 ENCODE chr19:2810663-2810711
64251 chr8 95789953 95789953 1 + C T SKCM 95789952 + 95789932 95789972 41 CAGCATTTGGTGTATGTTCTCCCGAACTTTGGATGACACTT CAGCATTTGGTGTATGTTCTCTCGAACTTTGGATGACACTT < 41bp 0.611067180629832 0.828505706195028 0.37025458 0.8491597 prediction 0.434877051130393 Functional Gain - DPY19L4 ENSG00000156162 CDS Human protein_coding chr8:95789952 chr8:95789953 nonsynonymous SNV 0.983 2 22 hm5C_associated_SNPs_120901 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:95789929-95789967
64251 chr1 109235400 109235400 1 + C A UCEC 109235399 + 109235379 109235419 41 ATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTC ATGAACCTCAACCCCATGATCATGACCAACATCCTGTCGTC < 41bp 0.490612273601114 0.717436452747055 0.09790507 0.20151815 prediction 0.434872905494109 Functional Gain - PRPF38B ENSG00000134186 CDS Human protein_coding chr1:109235399 chr1:109235400 nonsynonymous SNV 0.967 2 22 hm5C_associated_SNPs_120904 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350200 chr1:109235358-109235436
64251 chr19 47425387 47425387 1 + T C COAD 47425385 + 47425365 47425405 41 CGAGGGCGCAAGGTTTCCATCGTGAGCAAGCCAGTGCTGTA CGAGGGCGCAAGGTTTCCATCGCGAGCAAGCCAGTGCTGTA < 41bp 0.613640771774687 0.83107638822031 0.84296095 0.74171436 prediction 0.434871232891245 Functional Gain - ARHGAP35 ENSG00000160007 CDS Human protein_coding chr19:47425385 chr19:47425387 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_120905 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:47425380-47425400
64251 chr15 85164307 85164307 1 + T C STAD 85164305 + 85164285 85164325 41 TTTAGCCGGAGTGCCAACCTCATAACCCACCAGAGGATCCA TTTAGCCGGAGTGCCAACCTCACAACCCACCAGAGGATCCA < 41bp 0.43932583217528 0.717424167483802 0.39301717 0.41055694 prediction 0.434848334967605 Functional Gain - ZSCAN2 ENSG00000176371 CDS Human protein_coding chr15:85164305 chr15:85164307 nonsynonymous SNV 0.973 1 23 hm5C_associated_SNPs_120911 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr15:85164289-85164316
64251 chr3 101284214 101284214 1 + C T KIRP 101284213 + 101284193 101284233 41 GCAATGGGCTGGAAGGGTGCCCAGGCCATGCAGTTTGGACA GCAATGGGCTGGAAGGGTGCCTAGGCCATGCAGTTTGGACA < 41bp 0.482332205061766 0.717414503272408 0.23394403 0.2893848 prediction 0.434829006544815 Functional Gain - TRMT10C ENSG00000174173 CDS Human protein_coding chr3:101284213 chr3:101284214 stopgain 0.995 1 22 hm5C_associated_SNPs_120915 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:101284158-101284219
64251 chr1 114450746 114450746 1 + C T SKCM 114450745 + 114450725 114450765 41 TCCAGCCCTGGTTCTTCCTTCCCGACAAGAAGCTGCCCACC TCCAGCCCTGGTTCTTCCTTCTCGACAAGAAGCTGCCCACC < 41bp 0.628881297493629 0.846295098505205 0.17278531 0.57157767 prediction 0.434827602023153 Functional Gain - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114450745 chr1:114450746 synonymous SNV . 0 22 hm5C_associated_SNPs_120916 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:114450722-114450760
64251 chr7 129349050 129349050 1 + C A GBM 129349049 + 129349029 129349069 41 GCAAATGTCCGGAGTGATGTCCGCACAGAAGAGCAAAAGCA GCAAATGTCCGGAGTGATGTCAGCACAGAAGAGCAAAAGCA < 41bp 0.613443375269861 0.830852497682746 0.07392806 0.20030257 prediction 0.43481824482577 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129349049 chr7:129349050 nonsynonymous SNV 0.986 5 22 hm5C_associated_SNPs_120918 0 0 2 BUD13 POSTAR2 ENCODE chr7:129349026-129349072
64251 chrX 102632483 102632483 1 + C T THCA 102632482 + 102632462 102632502 41 ATGCAGAATGGAGAGGAAGACCGCCCTTTGGGAGGAGGTGA ATGCAGAATGGAGAGGAAGACTGCCCTTTGGGAGGAGGTGA < 41bp 0.535199211338022 0.752602011592144 0.3318718 0.2724393 prediction 0.434805600508243 Functional Gain - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632482 chrX:102632483 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_120922 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:102632413-102632498
64251 chr19 18779735 18779735 1 + A G LUAD 18779732 + 18779712 18779752 41 CCATGGTGGGTGCCGGCGGCCGCATCTATGCCCTCGGGGGC CCATGGTGGGTGCCGGCGGCCGCGTCTATGCCCTCGGGGGC < 41bp 0.583580148358702 0.800976190672777 0.37651902 0.43767357 prediction 0.434792084628149 Functional Gain - KLHL26 ENSG00000167487 CDS Human protein_coding chr19:18779732 chr19:18779735 nonsynonymous SNV 0.923 0 24 hm5C_associated_SNPs_120926 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:18779734-18779735
64251 chr14 105716611 105716611 1 + C T PRAD 105716610 + 105716590 105716630 41 CGCAGCAACCAGTGGCGGTACCGCGGGCGCTGCGACAGCAT CGCAGCAACCAGTGGCGGTACTGCGGGCGCTGCGACAGCAT < 41bp 0.461879766726504 0.717371202585559 0.8487042 0.5451081 prediction 0.434742405171118 Functional Gain - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105716610 chr14:105716611 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120935 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105716607-105716638
64251 chr20 47838054 47838054 1 + T C STAD 47838052 + 47838032 47838072 41 ACCGCAGTGCTGATTTCAACCCTGATTTCGTTTTCACTGAG ACCGCAGTGCTGATTTCAACCCCGATTTCGTTTTCACTGAG < 41bp 0.64643817265833 0.863801332587123 0.14596939 0.11328268 prediction 0.434726319857586 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47838052 chr20:47838054 synonymous SNV . 0 23 hm5C_associated_SNPs_120938 0 0 5 DDX24 POSTAR2 ENCODE chr20:47837988-47838095
64251 chr19 14817548 14817548 1 + T A rs6511961 14817544 + 14817524 14817564 41 GAGGGTGGTGATACCAGTGCCTACTCTGGGCCACCGCAACC GAGGGTGGTGATACCAGTGCCTACACTGGGCCACCGCAACC < 41bp 0.374168078381522 0.717360013444392 0.073111385 0.87491226 prediction 0.434720026888785 Functional Gain - ZNF333 ENSG00000160961 CDS Human protein_coding chr19:14817544 chr19:14817548 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_120939 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:14817522-14817560
64251 chr13 114150035 114150035 1 + C T BRCA 114150034 + 114150014 114150054 41 GGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAG GGGGTGGCTGCCATGCAGAGCTGGCAGTGGGTCCGGGACAG < 41bp 0.544875057497462 0.762226868363837 0.7166422 0.40000865 prediction 0.434703621732749 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114150034 chr13:114150035 nonsynonymous SNV 0.030 2 22 hm5C_associated_SNPs_120942 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:114150006-114150036
64251 chr3 89499399 89499399 1 + A G UCEC 89499396 + 89499376 89499416 41 GCCCAGCTGCCTTGTATCAGCTGATGCTGGACTGCTGGCAG GCCCAGCTGCCTTGTATCAGCTGGTGCTGGACTGCTGGCAG < 41bp 0.51991131303059 0.737257651024897 0.31315058 0.36647612 prediction 0.434692675988614 Functional Gain - EPHA3 ENSG00000044524 CDS Human protein_coding chr3:89499396 chr3:89499399 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_120944 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:89499395-89499413
64251 chr2 170668343 170668343 1 + C T UCEC 170668342 + 170668322 170668362 41 CGGGGCTTTTAAAAGGAAAACCGAATTAGGTCCACTTCAAT CGGGGCTTTTAAAAGGAAAACTGAATTAGGTCCACTTCAAT < 41bp 0.490321869182963 0.717338268683271 0.35185605 0.30564666 prediction 0.434676537366542 Functional Gain - METTL5 ENSG00000138382 CDS Human protein_coding chr2:170668342 chr2:170668343 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_120946 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:170668289-170668360
64251 chr15 59416424 59416424 1 + T C rs74017365 59416422 + 59416402 59416442 41 TGTGCTTGTGTGACACCAAACATCAGAGCTCACCAAGTGTG TGTGCTTGTGTGACACCAAACACCAGAGCTCACCAAGTGTG < 41bp 0.484375148943081 0.71733788305641 0.15829694 0.16684818 prediction 0.43467576611282 Functional Gain - CCNB2 ENSG00000259732 ncRNA_intronic Human sense_overlapping chr15:59416422 chr15:59416424 . . 0 23 hm5C_associated_SNPs_120947 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:59416400-59416438
64251 chr17 41063082 41063082 1 + T C LUAD 41063079 + 41063059 41063099 41 GGGTGTAGACCTCCTGTGGACTCTGGAGAAAGCCCAGAGGT GGGTGTAGACCTCCTGTGGACTCCGGAGAAAGCCCAGAGGT < 41bp 0.528571003714576 0.745897875225575 0.38234213 0.3040756 prediction 0.434653743021998 Functional Gain - G6PC ENSG00000131482 CDS Human protein_coding chr17:41063079 chr17:41063082 nonsynonymous SNV 0.907 3 24 hm5C_associated_SNPs_120950 0 0 3 RPS3 POSTAR2 ENCODE chr17:41063034-41063251
64251 chr8 120435213 120435213 1 + T G TGCT 120435210 + 120435190 120435230 41 GGCCGCTGCTGCACTCCCCACAATACCAAAACCATCCAGGC GGCCGCTGCTGCACTCCCCACAAGACCAAAACCATCCAGGC < 41bp 0.329147069565628 0.717314472296123 0.114769995 0.31892055 prediction 0.434628944592245 Functional Gain - NOV ENSG00000136999 CDS Human protein_coding chr8:120435210 chr8:120435213 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_120957 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr8:120435191-120435227
64251 chr6 43144340 43144340 1 + C T UCEC 43144339 + 43144319 43144359 41 CCATTCAAGTGCACCAGGCCCCACAGCAAGCGTCTCCCTCC CCATTCAAGTGCACCAGGCCCTACAGCAAGCGTCTCCCTCC < 41bp 0.44738856263349 0.717312171022329 0.037580967 0.63113296 prediction 0.434624342044658 Functional Gain - SRF ENSG00000112658 CDS Human protein_coding chr6:43144339 chr6:43144340 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_120959 0 0 1 IGF2BP1 POSTAR2 ENCODE chr6:43144338-43144404
64251 chr4 40104499 40104499 1 + C T rs201104252 40104498 + 40104478 40104518 41 GGAAGGATGTGAGTTACTGCCCGGTACTTGCTCCTCTCCCA GGAAGGATGTGAGTTACTGCCTGGTACTTGCTCCTCTCCCA < 41bp 0.556951727068804 0.774263788646459 0.33779103 0.31323403 prediction 0.43462412315531 Functional Gain - N4BP2 ENSG00000078177 CDS Human protein_coding chr4:40104498 chr4:40104499 nonsynonymous SNV 0.420 2 22 hm5C_associated_SNPs_120960 0 0 1 FXR2 POSTAR2 ENCODE chr4:40104465-40104551
64251 chr12 49918499 49918499 1 + C T SKCM 49918498 + 49918478 49918518 41 GAACAGCTATTCGACCAGATCCCGATGTAGCTCAGTTACAT GAACAGCTATTCGACCAGATCTCGATGTAGCTCAGTTACAT < 41bp 0.434803125899738 0.717300026450806 0.1994547 0.33546263 prediction 0.434600052901612 Functional Gain - SPATS2 ENSG00000123352 CDS Human protein_coding chr12:49918498 chr12:49918499 synonymous SNV . 0 22 hm5C_associated_SNPs_120966 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:49918474-49918510
64251 chr5 653169 653169 1 + C T UCEC 653168 + 653148 653188 41 GGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCAGATGCACT GGTGCGGGCGCAGCACAGAGCTGAGGTGGAGCAGATGCACT < 41bp 0.509960477503895 0.727255831494796 0.85668963 0.52239114 prediction 0.434590707981803 Functional Gain - CEP72 ENSG00000112877 CDS Human protein_coding chr5:653168 chr5:653169 synonymous SNV . 0 22 hm5C_associated_SNPs_120969 0 0 3 PPIG POSTAR2 ENCODE chr5:653141-653169
64251 chr2 176981980 176981980 1 + C T SKCM 176981979 + 176981959 176981999 41 GGCTGGTCCCTGAGTCTTGTCCCGTTGAGAACCCTGAGGTT GGCTGGTCCCTGAGTCTTGTCTCGTTGAGAACCCTGAGGTT < 41bp 0.572663006192096 0.789957885461662 0.2807151 0.33845127 prediction 0.434589758539131 Functional Gain - HOXD10 ENSG00000128710 CDS Human protein_coding chr2:176981979 chr2:176981980 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_120971 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:176981879-176982059
64251 chr1 48701511 48701511 1 + C T HNSC 48701510 + 48701490 48701530 41 ATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCA ATTGATGTGTGGCAGCGCTTCTGCAGGAAGTCAACAGAGCA < 41bp 0.601781587579475 0.819069985716995 0.17721647 0.21113142 prediction 0.434576796275041 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48701510 chr1:48701511 nonsynonymous SNV 0.904 5 22 hm5C_associated_SNPs_120974 0 0 2 PPIG POSTAR2 ENCODE chr1:48701501-48701549
64251 chr2 216191621 216191621 1 + A G UCEC 216191618 + 216191598 216191638 41 ACAGTACAGCAAAGGCGTATCTCAGATGCCCTTGAGATATG ACAGTACAGCAAAGGCGTATCTCGGATGCCCTTGAGATATG < 41bp 0.561167279804924 0.778452809856638 0.2316638 0.3081368 prediction 0.434571060103427 Functional Gain - ATIC ENSG00000138363 CDS Human protein_coding chr2:216191618 chr2:216191621 nonsynonymous SNV 0.906 3 24 hm5C_associated_SNPs_120976 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:216191609-216191639
64251 chr8 101166134 101166134 1 + C G rs7924 101166130 + 101166110 101166150 41 GTAAAGTTGCTTCCCCAAACCACACTTTTAATCAAAACCTA GTAAAGTTGCTTCCCCAAACCACAGTTTTAATCAAAACCTA < 41bp 0.536662705519088 0.753944435537465 0.031775296 0.0525119 prediction 0.434563460036753 Functional Gain - POLR2K ENSG00000147669 UTR3 Human protein_coding chr8:101166130 chr8:101166134 . . 0 25 hm5C_associated_SNPs_120977 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:101166070-101166222
64251 chr9 35675828 35675828 1 + C T SKCM 35675827 + 35675807 35675847 41 GTCCCCGGTGGATATCCGCCCCCAGCTCGCCGCCTTCTGCC GTCCCCGGTGGATATCCGCCCTCAGCTCGCCGCCTTCTGCC < 41bp 0.469168385181784 0.717280435767125 0.082164735 0.12732285 prediction 0.43456087153425 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35675827 chr9:35675828 synonymous SNV . 0 22 hm5C_associated_SNPs_120978 0 0 1 RPS3 POSTAR2 ENCODE chr9:35675757-35675885
64251 chr13 95257708 95257708 1 + A G STAD 95257705 + 95257685 95257725 41 AGTAGCTGTTGGAAAAGAAGCTAAACTCTACCTGTTCCAAG AGTAGCTGTTGGAAAAGAAGCTAGACTCTACCTGTTCCAAG < 41bp 0.543528861505488 0.760807624994947 0.11306107 0.1511066 prediction 0.434557526978918 Functional Gain - GPR180 ENSG00000152749 CDS Human protein_coding chr13:95257705 chr13:95257708 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_120981 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:95257692-95257720
64251 chr12 58109752 58109752 1 + C T rs563206099 58109751 + 58109731 58109771 41 GGCCTACGTTCAGAGGCAAGCCGGTGAGTAATTAGAGAAGG GGCCTACGTTCAGAGGCAAGCTGGTGAGTAATTAGAGAAGG < 41bp 0.550376788971843 0.767646946624603 0.22052747 0.37583837 prediction 0.43454031530552 Functional Gain - OS9 ENSG00000135506 CDS Human protein_coding chr12:58109751 chr12:58109752 synonymous SNV . 0 22 hm5C_associated_SNPs_120984 0 0 1 METAP2 POSTAR2 ENCODE chr12:58109578-58109756
64251 chr17 695156 695156 1 + C T SKCM 695155 + 695135 695175 41 CCTGGAGTCCCTGCAGCTGGCCGAGAGCACTGGTGGCAAGA CCTGGAGTCCCTGCAGCTGGCTGAGAGCACTGGTGGCAAGA < 41bp 0.481028313092229 0.717267747460842 0.7520156 0.46516025 prediction 0.434535494921684 Functional Gain - MRM3 ENSG00000171861 CDS Human protein_coding chr17:695155 chr17:695156 synonymous SNV . 0 22 hm5C_associated_SNPs_120985 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:695132-695159
64251 chr13 28712704 28712704 1 + C A rs187574197 28712700 + 28712680 28712720 41 CCACCCGCCCAGGCTTTTATCCGGCACCGGCAGCGTCTTCC CCACCCGCCCAGGCTTTTATCCGGAACCGGCAGCGTCTTCC < 41bp 0.688361670344737 0.905617675450495 0.904683 0.92374104 prediction 0.434512010211516 Functional Gain - PAN3-AS1 ENSG00000152520 UTR5 Human protein_coding chr13:28712700 chr13:28712704 . . 0 25 hm5C_associated_SNPs_120991 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585665 chr13:28712703-28712732
64251 chr7 90893971 90893971 1 + C G rs2232156 90893967 + 90893947 90893987 41 GGCGGGACACGACCCCGGCGCGCCCTAGCCACCCGGGTTCT GGCGGGACACGACCCCGGCGCGCCGTAGCCACCCGGGTTCT < 41bp 0.616086660025374 0.833339174020253 0.09968048 0.3038395 prediction 0.434505027989759 Functional Gain - FZD1 ENSG00000157240 UTR5 Human protein_coding chr7:90893967 chr7:90893971 . . 0 25 hm5C_associated_SNPs_120993 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:90893971-90893972
64251 chr17 8157270 8157270 1 + T C LIHC 8157268 + 8157248 8157288 41 CTGCAGAGATGTCCCCAGTCCTTCACTTCTATGTTCGTCCC CTGCAGAGATGTCCCCAGTCCTCCACTTCTATGTTCGTCCC < 41bp 0.410282020266664 0.717247233612249 0.016709626 0.86227286 prediction 0.434494467224499 Functional Gain - PFAS ENSG00000178921 CDS Human protein_coding chr17:8157268 chr17:8157270 synonymous SNV . 0 23 hm5C_associated_SNPs_120996 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:8157260-8157280
64251 chr17 55752377 55752377 1 + C T SKCM 55752376 + 55752356 55752396 41 GGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCT GGCTTCCCGGGGGCCAACAGCTCAGGACCTGTCGCCGATCT < 41bp 0.496812589705809 0.717234727720127 0.53170145 0.329894 prediction 0.434469455440253 Functional Gain - MSI2 ENSG00000153944 CDS Human protein_coding chr17:55752376 chr17:55752377 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_120999 0 0 6 DDX24 POSTAR2 ENCODE chr17:55752364-55752428
64251 chr19 32845640 32845640 1 + C T UCEC 32845639 + 32845619 32845659 41 ACAATGTGGTGGAATACATCCCGAATGCTGAACGACCCTAC ACAATGTGGTGGAATACATCCTGAATGCTGAACGACCCTAC < 41bp 0.467489565355624 0.717232684073085 0.26079953 0.24245745 prediction 0.43446536814617 Functional Gain - ZNF507 ENSG00000168813 CDS Human protein_coding chr19:32845639 chr19:32845640 nonsynonymous SNV 0.229 4 22 hm5C_associated_SNPs_121000 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:32845514-32845667
64251 chr16 88008773 88008773 1 + C T SKCM 88008772 + 88008752 88008792 41 GTTCAGATTGCAGTGGAAGACCTGAGCCCTGACCACCCAGG GTTCAGATTGCAGTGGAAGACTTGAGCCCTGACCACCCAGG < 41bp 0.465163498208866 0.717230082695281 0.33183867 0.25328952 prediction 0.434460165390562 Functional Gain - BANP ENSG00000172530 CDS Human protein_coding chr16:88008772 chr16:88008773 synonymous SNV . 0 22 hm5C_associated_SNPs_121001 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr16:88008755-88008789
64251 chr2 111881584 111881584 1 + C A STAD 111881580 + 111881560 111881600 41 TTCATCTTTATGAGAAGATCCTCCCTGCTGTCTCGATCCTC TTCATCTTTATGAGAAGATCCTCCATGCTGTCTCGATCCTC < 41bp 0.31603880609384 0.717223243373999 0.21848986 0.9720712 prediction 0.434446486747998 Functional Gain - BCL2L11 ENSG00000153094 CDS Human protein_coding chr2:111881580 chr2:111881584 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_121003 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:111881571-111881601
64251 chr19 24310427 24310427 1 + A G GBM 24310424 + 24310404 24310444 41 TAAACATAAGATAATTCATACTGAAGAGAAACCCTACAAAT TAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAAT < 41bp 0.5259819977826 0.743201555103999 0.025457948 0.17779696 prediction 0.434439114642798 Functional Gain - ZNF254 ENSG00000213096 CDS Human protein_coding chr19:24310424 chr19:24310427 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_121004 0 0 1 ZNF622 POSTAR2 ENCODE chr19:24310385-24310438
64251 chr4 1808044 1808044 1 + C T BLCA 1808043 + 1808023 1808063 41 TTTGACCGAGTCTACACTCACCAGAGTGACGTGTACGTGTC TTTGACCGAGTCTACACTCACTAGAGTGACGTGTACGTGTC < 41bp 0.609344426856294 0.826563285411459 0.85917336 0.7966558 prediction 0.43443771711033 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808043 chr4:1808044 stopgain 1.000 0 22 hm5C_associated_SNPs_121005 0 0 5 DDX24 POSTAR2 ENCODE chr4:1807999-1808052
64251 chr18 32722869 32722869 1 + T A rs617759 32722865 + 32722845 32722885 41 GGGCTGGGCAGGAAGCGTCCCTGATTGCGTGCTCCACTTCT GGGCTGGGCAGGAAGCGTCCCTGAATGCGTGCTCCACTTCT < 41bp 0.4447021290443 0.717213876524011 0.034299076 0.092590064 prediction 0.434427753048023 Functional Gain - MAPRE2 ENSG00000166974 UTR3 Human protein_coding chr18:32722865 chr18:32722869 . . 0 25 hm5C_associated_SNPs_121008 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr18:32722857-32722878
64251 chr3 66431248 66431248 1 - G A rs35066235 66431249 - 66431229 66431269 41 CGTATGCAGTGACTGCAACACCGAAGTGGACTGTTACTCCA CGTATGCAGTGACTGCAACACTGAAGTGGACTGTTACTCCA < 41bp 0.584910963649568 0.802121452689966 0.265504 0.23854837 prediction 0.434420978080797 Functional Gain - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431249 chr3:66431248 synonymous SNV . 0 22 hm5C_associated_SNPs_121009 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr3:66431223-66431254
64251 chr1 218458715 218458715 1 + C A rs114550993 218458714 + 218458694 218458734 41 GGAAGAAAACCTGAAAAAGACCCCAAAGAAGAAGATGAAAA GGAAGAAAACCTGAAAAAGACACCAAAGAAGAAGATGAAAA < 41bp 0.559116939374906 0.776327402750287 0.16975331 0.33645654 prediction 0.434420926750763 Functional Gain - RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458714 chr1:218458715 synonymous SNV . 0 22 hm5C_associated_SNPs_121010 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:218458660-218458720
64251 chr19 19613178 19613178 1 + C T LUSC 19613177 + 19613157 19613197 41 CCGGGGTTCGGCCACGACGCCCCGAGGTGTCCTGCACACGT CCGGGGTTCGGCCACGACGCCTCGAGGTGTCCTGCACACGT < 41bp 0.622077735093266 0.839287655838606 0.0876323 0.46752945 prediction 0.43441984149068 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19613177 chr19:19613178 synonymous SNV . 0 22 hm5C_associated_SNPs_121011 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:19613172-19613201
64251 chr19 8326855 8326855 1 + C T SKCM 8326854 + 8326834 8326874 41 TGATGTAGAAGAATCAGACTCCAGTGAGGAGGCGGCGGCGG TGATGTAGAAGAATCAGACTCTAGTGAGGAGGCGGCGGCGG < 41bp 0.545145519155038 0.762344236885394 0.45592538 0.34480554 prediction 0.434397435460711 Functional Gain - CERS4 ENSG00000090661 CDS Human protein_coding chr19:8326854 chr19:8326855 synonymous SNV . 0 22 hm5C_associated_SNPs_121017 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:8326855-8326897
64251 chr17 25628904 25628904 1 + C T UCEC 25628903 + 25628883 25628923 41 ATTGGACTGTTGCTTTTGCTCCAGATGGTTCATACTTTGCT ATTGGACTGTTGCTTTTGCTCTAGATGGTTCATACTTTGCT < 41bp 0.591100633591277 0.808290468352531 0.37174678 0.26957828 prediction 0.434379669522509 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25628903 chr17:25628904 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_121019 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:25628872-25628956
64251 chr20 61594660 61594660 1 + C T HNSC 61594659 + 61594639 61594679 41 TTGGGTGTCCTGGCCCAAAGCCGGCCGGTGTCCAGGCACAA TTGGGTGTCCTGGCCCAAAGCTGGCCGGTGTCCAGGCACAA < 41bp 0.4738039727068 0.717182296949996 0.8185917 0.54336303 prediction 0.434364593899991 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61594659 chr20:61594660 nonsynonymous SNV 0.015 1 22 hm5C_associated_SNPs_121024 0 0 7 EFTUD2 POSTAR2 ENCODE chr20:61594602-61594672
64251 chr4 48487057 48487057 1 + C T GBM 48487056 + 48487036 48487076 41 CCCTATCGTGCAGTTACTACCCCTAGGGACCGTGACCCTGA CCCTATCGTGCAGTTACTACCTCTAGGGACCGTGACCCTGA < 41bp 0.64106640654386 0.858248643278829 0.07323688 0.89412403 prediction 0.434364473469937 Functional Gain - SLC10A4 ENSG00000145248 CDS Human protein_coding chr4:48487056 chr4:48487057 synonymous SNV . 0 22 hm5C_associated_SNPs_121025 0 0 1 IGF2BP2 POSTAR2 ENCODE chr4:48486972-48487133
64251 chr3 185304281 185304281 1 + T A COAD 185304277 + 185304257 185304297 41 CGGTGCCCCCTGCCCGGGCCCTCCTGAAGAGGCGGCGCTCA CGGTGCCCCCTGCCCGGGCCCTCCAGAAGAGGCGGCGCTCA < 41bp 0.683481342158089 0.900661622149702 0.2239548 0.93957067 prediction 0.434360559983227 Functional Gain - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185304277 chr3:185304281 nonsynonymous SNV 0.993 2 25 hm5C_associated_SNPs_121026 0 0 3 DDX3X POSTAR2 ENCODE chr3:185304235-185304292
64251 chr6 41309820 41309820 1 + C T UCEC 41309819 + 41309799 41309839 41 GGCCCTGCAGCCCCCATTGCCCTGGTGCCTGTGTTCTGTGG GGCCCTGCAGCCCCCATTGCCTTGGTGCCTGTGTTCTGTGG < 41bp 0.472787233686257 0.717176508115187 0.16025949 0.099432945 prediction 0.434353016230373 Functional Gain - NCR2 ENSG00000096264 CDS Human protein_coding chr6:41309819 chr6:41309820 synonymous SNV . 0 22 hm5C_associated_SNPs_121030 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr6:41309817-41309844
64251 chr17 73221439 73221439 1 + C A rs2291029 73221438 + 73221418 73221458 41 TGGCTGGTCTCTCCCTTAGCCCGGGAACACCCAGACACTGA TGGCTGGTCTCTCCCTTAGCCAGGGAACACCCAGACACTGA < 41bp 0.623027525406545 0.840201810564907 0.36634007 0.88979423 prediction 0.434348570316725 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73221438 chr17:73221439 synonymous SNV . 0 22 hm5C_associated_SNPs_121031 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr17:73221420-73221460
64251 chr15 90996086 90996086 1 + C T COAD 90996085 + 90996065 90996105 41 TGTTTTGGAACTGATGAATCCCGAAGCCCAGCTGCCCCAGG TGTTTTGGAACTGATGAATCCTGAAGCCCAGCTGCCCCAGG < 41bp 0.461855088759231 0.717166607407852 0.8650456 0.26646835 prediction 0.434333214815705 Functional Gain - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:90996085 chr15:90996086 synonymous SNV . 0 22 hm5C_associated_SNPs_121036 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:90996042-90996088
64251 chr10 12259450 12259450 1 + C G SKCM 12259446 + 12259426 12259466 41 TTCAAGAGTTCCGATTTCATCACTCGTGACTTCACTCAGCC TTCAAGAGTTCCGATTTCATCACTGGTGACTTCACTCAGCC < 41bp 0.436116742042082 0.71715446929646 0.18493846 0.25266707 prediction 0.434308938592921 Functional Gain - CDC123 ENSG00000151465 CDS Human protein_coding chr10:12259446 chr10:12259450 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_121044 0 0 12 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr10:12259422-12259455
64251 chr6 42986204 42986204 1 + C T UCEC 42986203 + 42986183 42986223 41 AACAATGAGATTTACTGCAACCGCATTCGAGTCTTTGACAC AACAATGAGATTTACTGCAACTGCATTCGAGTCTTTGACAC < 41bp 0.62438511614697 0.841538566879963 0.10871956 0.23541823 prediction 0.434306901465985 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42986203 chr6:42986204 nonsynonymous SNV 0.988 3 22 hm5C_associated_SNPs_121045 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42986135-42986244
64251 chr4 120133874 120133874 1 + C G rs150011793 120133873 + 120133853 120133893 41 AGCCGCCTGTGCTCCAGTTCCCGGTGAGCCTCGGTACTGTG AGCCGCCTGTGCTCCAGTTCCGGGTGAGCCTCGGTACTGTG < 41bp 0.656588043080675 0.873737401235532 0.16412276 0.880098 prediction 0.434298716309713 Functional Gain - USP53 ENSG00000145390 UTR5 Human protein_coding chr4:120133873 chr4:120133874 . . 0 22 hm5C_associated_SNPs_121049 0 0 5 DDX3X POSTAR2 ENCODE chr4:120133848-120133964
64251 chr22 47393596 47393596 1 + C T BRCA 47393595 + 47393575 47393615 41 ATGTTAGAAGAACTCGTGAGCCGGATTGATGGTAAGCCAGC ATGTTAGAAGAACTCGTGAGCTGGATTGATGGTAAGCCAGC < 41bp 0.489492196863279 0.717146611977233 0.41709518 0.30416638 prediction 0.434293223954467 Functional Gain - TBC1D22A ENSG00000054611 CDS Human protein_coding chr22:47393595 chr22:47393596 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121052 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:47393573-47393598
64251 chrX 47070524 47070524 1 + C T rs2228658 47070523 + 47070503 47070543 41 TCAGGACCGAGCTGCTGTGGCCACATTCCTGCAGTCTGTGC TCAGGACCGAGCTGCTGTGGCTACATTCCTGCAGTCTGTGC < 41bp 0.454424581340245 0.717145505712086 0.17681292 0.30201846 prediction 0.434291011424172 Functional Gain - UBA1 ENSG00000130985 CDS Human protein_coding chrX:47070523 chrX:47070524 synonymous SNV . 0 22 hm5C_associated_SNPs_121053 2 0 18 FXR2 POSTAR2 GSE39682,GSM977620 chrX:47070482-47070529
64251 chr17 78939532 78939532 1 + C G rs539838663 78939531 + 78939511 78939551 41 CCCTGCCTGGTCACATTTGGCCAGAGACACACCTGGCCCTC CCCTGCCTGGTCACATTTGGCGAGAGACACACCTGGCCCTC < 41bp 0.623871560969587 0.841016232211397 0.8680828 0.90281504 prediction 0.43428934248362 Functional Gain - RPTOR ENSG00000141564 UTR3 Human protein_coding chr17:78939531 chr17:78939532 . . 0 22 hm5C_associated_SNPs_121054 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr17:78939490-78939564
64251 chr4 129778548 129778548 1 + C T SKCM 129778547 + 129778527 129778567 41 TCACCAAGGTGTCACACATTCCCAGCAGCCGGTGGGCGCTA TCACCAAGGTGTCACACATTCTCAGCAGCCGGTGGGCGCTA < 41bp 0.450291603526453 0.717140857356168 0.04041964 0.02618745 prediction 0.434281714712335 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129778547 chr4:129778548 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_121057 0 0 2 FXR2 POSTAR2 ENCODE chr4:129778509-129778562
64251 chr8 59059594 59059594 1 + C T UCEC 59059593 + 59059573 59059613 41 GACTTGAGTGACAGATATTTCCGAGTGGACGCGGACGTGGA GACTTGAGTGACAGATATTTCTGAGTGGACGCGGACGTGGA < 41bp 0.480672016382625 0.717137411706267 0.38178626 0.27791536 prediction 0.434274823412534 Functional Gain - FAM110B ENSG00000169122 CDS Human protein_coding chr8:59059593 chr8:59059594 stopgain 0.999 1 22 hm5C_associated_SNPs_121059 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:59059573-59059597
64251 chr2 31484520 31484520 1 + C T COAD 31484519 + 31484499 31484539 41 AACCTGGCCGAGATCTATGGCCGGATCGAGCGGGAGCACCA AACCTGGCCGAGATCTATGGCTGGATCGAGCGGGAGCACCA < 41bp 0.60945572854288 0.826587600096214 0.49291638 0.265045 prediction 0.434263743106668 Functional Gain - EHD3 ENSG00000013016 CDS Human protein_coding chr2:31484519 chr2:31484520 nonsynonymous SNV 0.286 3 22 hm5C_associated_SNPs_121062 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:31484510-31484540
64251 chr17 78211332 78211332 1 + C A rs188773399 78211331 + 78211311 78211351 41 CCTCTCTCAGGACATGGGAGCCGGGCTGGCCGTGGTGCCCC CCTCTCTCAGGACATGGGAGCAGGGCTGGCCGTGGTGCCCC < 41bp 0.613306191239658 0.830437575025243 0.9077053 0.9217112 prediction 0.434262767571171 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78211331 chr17:78211332 synonymous SNV . 0 22 hm5C_associated_SNPs_121063 0 0 2 PPIG POSTAR2 ENCODE chr17:78211328-78211385
64251 chr1 32646052 32646052 1 + C T SKCM 32646051 + 32646031 32646071 41 GGAGCCCAGGAGCGGCCCAGCCAGGCGGCTCCTGCAGTAGA GGAGCCCAGGAGCGGCCCAGCTAGGCGGCTCCTGCAGTAGA < 41bp 0.525040564364027 0.742168367672355 0.5412269 0.2789268 prediction 0.434255606616656 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32646051 chr1:32646052 stopgain 0.292 0 22 hm5C_associated_SNPs_121064 0 0 9 DDX24 POSTAR2 ENCODE chr1:32645998-32646114
64251 chr1 212209261 212209261 1 + C G PAAD 212209257 + 212209237 212209277 41 TCTTCAATTCGGTGCTCCGCCAGCCCCAGCTTGGCGTCCTG TCTTCAATTCGGTGCTCCGCCAGCGCCAGCTTGGCGTCCTG < 41bp 0.421800603345161 0.717123319649127 0.19949558 0.29789597 prediction 0.434246639298253 Functional Gain - DTL ENSG00000143476 CDS Human protein_coding chr1:212209257 chr1:212209261 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_121068 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:212209242-212209270
64251 chr2 27303044 27303044 1 + C T UCEC 27303043 + 27303023 27303063 41 TGGTGTGCCTACGTGGTGACCCGGACAGTGAGCTGTGTCCT TGGTGTGCCTACGTGGTGACCTGGACAGTGAGCTGTGTCCT < 41bp 0.572505147524716 0.789626890899184 0.7536238 0.6667674 prediction 0.434243486748936 Functional Gain - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27303043 chr2:27303044 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_121069 0 0 1 DDX3X POSTAR2 ENCODE chr2:27303020-27303066
64251 chr8 38065124 38065124 1 + C T SKCM 38065123 + 38065103 38065143 41 ACTCAGGGGCTTATTATGCACCTGGTTATACTCAGACCAGT ACTCAGGGGCTTATTATGCACTTGGTTATACTCAGACCAGT < 41bp 0.476405217921777 0.717115412200112 0.33557135 0.40723643 prediction 0.434230824400223 Functional Gain - BAG4 ENSG00000156735 CDS Human protein_coding chr8:38065123 chr8:38065124 nonsynonymous SNV 0.920 2 22 hm5C_associated_SNPs_121072 0 0 6 ZC3H7B POSTAR2 GSE38201,GSM936510 chr8:38065096-38065137
64251 chr1 155701154 155701154 1 + C T SKCM 155701153 + 155701133 155701173 41 TGTCCGATATGCAGATTGCCCCCGAGGAATTAGCACTTGTT TGTCCGATATGCAGATTGCCCTCGAGGAATTAGCACTTGTT < 41bp 0.611937688953144 0.829052380513656 0.043729484 0.062198758 prediction 0.434229383121023 Functional Gain - DAP3 ENSG00000132676 CDS Human protein_coding chr1:155701153 chr1:155701154 nonsynonymous SNV 0.957 2 22 hm5C_associated_SNPs_121073 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:155701147-155701197
64251 chr16 19729721 19729721 1 + C T rs111355075 19729720 + 19729700 19729740 41 CACCCGGACGCCGGTGCCCACCGTGTCTCTCGCGTCCCGCG CACCCGGACGCCGGTGCCCACTGTGTCTCTCGCGTCCCGCG < 41bp 0.541129524826612 0.758229204211741 0.2576304 0.17631426 prediction 0.434199358770257 Functional Gain - IQCK ENSG00000174628 CDS Human protein_coding chr16:19729720 chr16:19729721 synonymous SNV . 0 22 hm5C_associated_SNPs_121080 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:19729692-19729754
64251 chr13 100204476 100204476 1 + T C COAD 100204474 + 100204454 100204494 41 GATCCTCTGGGGAGAAGGATCTTCAGCAGCTATTCCTTTTG GATCCTCTGGGGAGAAGGATCTCCAGCAGCTATTCCTTTTG < 41bp 0.662612546600175 0.879711661898917 0.42175448 0.93516105 prediction 0.434198230597485 Functional Gain - TM9SF2 ENSG00000125304 CDS Human protein_coding chr13:100204474 chr13:100204476 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_121081 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:100204444-100204480
64251 chr6 43109462 43109462 1 + C T LUAD 43109461 + 43109441 43109481 41 GCTGGGACCCTGCATTTTGCCCGGGTGACTCGAGATGACGC GCTGGGACCCTGCATTTTGCCTGGGTGACTCGAGATGACGC < 41bp 0.583623923690681 0.800722630231253 0.47024146 0.27861887 prediction 0.434197413081144 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43109461 chr6:43109462 nonsynonymous SNV 0.977 3 22 hm5C_associated_SNPs_121084 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:43109449-43109468
64251 chr7 129396174 129396174 1 + C A rs11557288 129396173 + 129396153 129396193 41 GAAGCTAAGCTTGGTTGGGCCCGGTCAGTACGCGGAAGGGA GAAGCTAAGCTTGGTTGGGCCAGGTCAGTACGCGGAAGGGA < 41bp 0.461424355341184 0.717092577746094 0.17428166 0.527269 prediction 0.434185155492189 Functional Gain - NRF1 ENSG00000212238 ncRNA_exonic Human rRNA chr7:129396173 chr7:129396174 . . 0 22 hm5C_associated_SNPs_121089 0 1 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr7:129396146-129396180
64251 chr1 154437848 154437848 1 + C T SKCM 154437847 + 154437827 154437867 41 AGCAATACAGACTACTTCTTCCCCAGATAGCTGGCTGGGTG AGCAATACAGACTACTTCTTCTCCAGATAGCTGGCTGGGTG < 41bp 0.450919988826765 0.717087100872611 0.05248612 0.8600023 prediction 0.434174201745223 Functional Gain - IL6R ENSG00000160712 CDS Human protein_coding chr1:154437847 chr1:154437848 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_121093 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:154437828-154437862
64251 chr1 221057722 221057722 1 + C T COAD 221057721 + 221057701 221057741 41 TGAGAGCGAGAGCAGCGACTCCGAGTCCCTGGACATGGCCC TGAGAGCGAGAGCAGCGACTCTGAGTCCCTGGACATGGCCC < 41bp 0.495830441187053 0.717084938176931 0.21116215 0.113892734 prediction 0.434169876353862 Functional Gain - HLX ENSG00000136630 CDS Human protein_coding chr1:221057721 chr1:221057722 synonymous SNV . 0 22 hm5C_associated_SNPs_121095 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:221057698-221057736
64251 chr11 63764641 63764641 1 + C A KIRC 63764637 + 63764617 63764657 41 CTACCTGCGGCTGCTCACCTCGGGCTACCTGCAGCGCGAGA CTACCTGCGGCTGCTCACCTCGGGATACCTGCAGCGCGAGA < 41bp 0.721580056408234 0.938662709349638 0.93897766 0.9432271 prediction 0.434165305882807 Functional Gain - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63764637 chr11:63764641 synonymous SNV . 0 25 hm5C_associated_SNPs_121098 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:63764629-63764662
64251 chr9 77749286 77749286 1 + A G UCEC 77749283 + 77749263 77749303 41 TATAGTGGAAATGCTATTTACTCAACCAAATATTGAACTGA TATAGTGGAAATGCTATTTACTCGACCAAATATTGAACTGA < 41bp 0.493517179616059 0.717081305918191 0.22202936 0.8107376 prediction 0.434162611836381 Functional Gain - OSTF1 ENSG00000134996 CDS Human protein_coding chr9:77749283 chr9:77749286 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_121099 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr9:77749275-77749297
64251 chr1 33234269 33234269 1 + C T ESCA 33234268 + 33234248 33234288 41 GATAGTCCTCCCGGACGGGGCCGGATGAAGACAACATCTCC GATAGTCCTCCCGGACGGGGCTGGATGAAGACAACATCTCC < 41bp 0.472725317938116 0.717073251757846 0.3002289 0.14426982 prediction 0.434146503515691 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33234268 chr1:33234269 nonsynonymous SNV 0.300 2 22 hm5C_associated_SNPs_121102 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:33234254-33234292
64251 chr19 1434818 1434818 1 + C T SKCM 1434817 + 1434797 1434837 41 TCCTTCCTACGGGGGTCCCTCCGTGCCAGGGTCGGGGGGCC TCCTTCCTACGGGGGTCCCTCTGTGCCAGGGTCGGGGGGCC < 41bp 0.547422389417828 0.764488398485716 0.8114557 0.27474302 prediction 0.434132018135777 Functional Gain - DAZAP1 ENSG00000071626 CDS Human protein_coding chr19:1434817 chr19:1434818 synonymous SNV . 0 22 hm5C_associated_SNPs_121106 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:1434796-1434821
64251 chr22 24837116 24837116 1 + C T KICH 24837115 + 24837095 24837135 41 CGCGAGTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCA CGCGAGTTCCGCCAGACCTTCTGCAAGATCATTCGCAGCCA < 41bp 0.621045495691406 0.838098062810794 0.19587135 0.3833433 prediction 0.434105134238776 Functional Gain - ADORA2A ENSG00000128271 CDS Human protein_coding chr22:24837115 chr22:24837116 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_121111 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:24837098-24837118
64251 chr14 101200664 101200664 1 + C T COAD 101200663 + 101200643 101200683 41 ATTGGGGGCGACTTCCGCTGCCGGTGCCCAGCCGGCTTCAT ATTGGGGGCGACTTCCGCTGCTGGTGCCCAGCCGGCTTCAT < 41bp 0.556686499306124 0.773731839427996 0.5976995 0.09271893 prediction 0.434090680243744 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101200663 chr14:101200664 nonsynonymous SNV 0.977 2 22 hm5C_associated_SNPs_121115 0 0 9 DDX3X POSTAR2 ENCODE chr14:101200650-101200752
64251 chr12 105540296 105540296 1 + A G UCEC 105540293 + 105540273 105540313 41 TGTCCCGATACCTCTATAATCTCAACAATCAGGTGAGTAGG TGTCCCGATACCTCTATAATCTCGACAATCAGGTGAGTAGG < 41bp 0.504328670521249 0.721367984075527 0.09125471 0.4639674 prediction 0.434078627108555 Functional Gain - WASHC4 ENSG00000136051 CDS Human protein_coding chr12:105540293 chr12:105540296 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_121117 0 0 5 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr12:105540279-105540300
64251 chr17 27068498 27068498 1 + A G UCEC 27068495 + 27068475 27068515 41 GGAAGGAGGGATGAGGATGCCGGACTCCCTCGGCCAGTGCA GGAAGGAGGGATGAGGATGCCGGGCTCCCTCGGCCAGTGCA < 41bp 0.584528243396542 0.801565448519612 0.78892416 0.9043362 prediction 0.434074410246139 Functional Gain - NEK8 ENSG00000160602 CDS Human protein_coding chr17:27068495 chr17:27068498 synonymous SNV . 0 24 hm5C_associated_SNPs_121118 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:27068487-27068534
64251 chr4 3319336 3319336 1 + C T SKCM 3319335 + 3319315 3319355 41 CTGGGCCCTTCTGTCCGGACCCCGAAGGGAGCCCCCCATTT CTGGGCCCTTCTGTCCGGACCTCGAAGGGAGCCCCCCATTT < 41bp 0.480884049450719 0.717036354290348 0.18890017 0.8956231 prediction 0.434072708580695 Functional Gain - RGS12 ENSG00000159788 CDS Human protein_coding chr4:3319335 chr4:3319336 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_121119 0 0 2 BUD13 POSTAR2 ENCODE chr4:3319285-3319338
64251 chr7 107559678 107559678 1 + T G UCEC 107559676 + 107559656 107559696 41 TAGAGAAGCAAATCTTGCTGCGTCATTTGGCAAATCAATCA TAGAGAAGCAAATCTTGCTGCGGCATTTGGCAAATCAATCA < 41bp 0.411283008276838 0.717029989877185 0.14327279 0.28494585 prediction 0.43405997975437 Functional Gain - DLD ENSG00000091140 CDS Human protein_coding chr7:107559676 chr7:107559678 nonsynonymous SNV 0.995 1 23 hm5C_associated_SNPs_121123 0 0 11 FUS POSTAR2 DRA001158,DRS012384 chr7:107559646-107559687
64251 chr1 196659317 196659317 1 + A G BRCA 196659314 + 196659294 196659334 41 GCTCTTCCAAAAGCGCAGACCACAGTTACATGTATGGAGAA GCTCTTCCAAAAGCGCAGACCACGGTTACATGTATGGAGAA < 41bp 0.578676973115873 0.795701382468392 0.13873672 0.2850559 prediction 0.434048818705038 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196659314 chr1:196659317 synonymous SNV . 0 24 hm5C_associated_SNPs_121125 0 0 2 SND1 POSTAR2 ENCODE chr1:196659251-196659317
64251 chr20 62505042 62505042 1 + C G HNSC 62505038 + 62505018 62505058 41 CAGGTGGAAGAGGAAATTGTCACTCTGCGCCAGGTCCTGGC CAGGTGGAAGAGGAAATTGTCACTGTGCGCCAGGTCCTGGC < 41bp 0.427590137439823 0.717023689813623 0.25704104 0.11627737 prediction 0.434047379627247 Functional Gain - TPD52L2 ENSG00000101150 CDS Human protein_coding chr20:62505038 chr20:62505042 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_121126 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:62505030-62505051
64251 chr9 108483838 108483838 1 + C G OV 108483837 + 108483817 108483857 41 GGTATATTACATTTTTTTGCCCGCATGACCTAGTTTCCCAG GGTATATTACATTTTTTTGCCGGCATGACCTAGTTTCCCAG < 41bp 0.415532687111649 0.717020084033554 0.099351436 0.387464 prediction 0.434040168067108 Functional Gain - TMEM38B ENSG00000095209 CDS Human protein_coding chr9:108483837 chr9:108483838 nonsynonymous SNV 0.582 4 22 hm5C_associated_SNPs_121128 0 0 10 ZC3H7B POSTAR2 GSE38201,GSM936510 chr9:108483818-108483843
64251 chr10 70516155 70516155 1 + C A BLCA 70516151 + 70516131 70516171 41 TTTGGCATTGCCTTCCCACCCGCTCAGAGTGGGAAACCCTC TTTGGCATTGCCTTCCCACCCGCTAAGAGTGGGAAACCCTC < 41bp 0.294530921938977 0.717019213584818 0.07823071 0.34144282 prediction 0.434038427169635 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70516151 chr10:70516155 stopgain 1.000 1 25 hm5C_associated_SNPs_121130 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70516152-70516233
64251 chr22 29703048 29703048 1 + A G rs376400273 29703045 + 29703025 29703065 41 GAGGAGGCCGCGGCGCGGGACGCATAGAGCTGCGGCTCGGG GAGGAGGCCGCGGCGCGGGACGCGTAGAGCTGCGGCTCGGG < 41bp 0.524821834749597 0.741833060445594 0.33948475 0.37699294 prediction 0.434022451391995 Functional Gain - GAS2L1 ENSG00000185340 UTR5 Human protein_coding chr22:29703045 chr22:29703048 . . 0 24 hm5C_associated_SNPs_121136 0 0 1 DDX3X POSTAR2 ENCODE chr22:29703047-29703146
64251 chr19 15807806 15807806 1 + A G SKCM 15807803 + 15807783 15807823 41 ACTTCCGGTTCCTGCCAGACCACACTGAGCCCCGCAGGAAG ACTTCCGGTTCCTGCCAGACCACGCTGAGCCCCGCAGGAAG < 41bp 0.595719373219914 0.812728208497613 0.081562966 0.26727897 prediction 0.434017670555398 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807803 chr19:15807806 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_121137 0 0 2 GRWD1 POSTAR2 ENCODE chr19:15807774-15807815
64251 chr3 14989310 14989310 1 + C A rs564563191 14989309 + 14989289 14989329 41 CCCCGGGCTCCCGCCATCCGCCGACACCGGGAGCCCGGGCT CCCCGGGCTCCCGCCATCCGCAGACACCGGGAGCCCGGGCT < 41bp 0.536835519036729 0.75384361592264 0.42761964 0.8965822 prediction 0.434016193771822 Functional Gain - FGD5-AS1 ENSG00000225733 ncRNA_exonic Human antisense chr3:14989309 chr3:14989310 . . 0 22 hm5C_associated_SNPs_121138 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819215 chr3:14989300-14989320
64251 chr2 173292503 173292503 1 + C A rs144341070 173292499 + 173292479 173292519 41 CGCTGCAGGTCCCCGCTCCCCTCCCCGTGCGTCCGCCCATG CGCTGCAGGTCCCCGCTCCCCTCCACGTGCGTCCGCCCATG < 41bp 0.650310419803194 0.867318117402647 0.34745756 0.93737286 prediction 0.434015395198905 Functional Gain - ITGA6 ENSG00000226963 ncRNA_exonic Human antisense chr2:173292499 chr2:173292503 . . 0 25 hm5C_associated_SNPs_121139 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:173292484-173292537
64251 chr22 38204029 38204029 1 + C G rs78610332 38204028 + 38204008 38204048 41 TTCTGGGTGCCCCGCGGCCGCCGCGCACAGTCAGCGCTGGC TTCTGGGTGCCCCGCGGCCGCGGCGCACAGTCAGCGCTGGC < 41bp 0.66479472402407 0.881800669162707 0.05467519 0.4178431 prediction 0.434011890277275 Functional Gain - GCAT ENSG00000100116 CDS Human protein_coding chr22:38204028 chr22:38204029 nonsynonymous SNV 0.203 2 22 hm5C_associated_SNPs_121142 0 0 6 DDX3X POSTAR2 ENCODE chr22:38203955-38204034
64251 chr16 8729070 8729070 1 + C A LGG 8729066 + 8729046 8729086 41 CTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGG CTGGCAGACTACATCCTGTTCCGAAAGGACCTCTTCCGAGG < 41bp 0.300680925371125 0.716994936487791 0.08170968 0.17994872 prediction 0.433989872975582 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8729066 chr16:8729070 nonsynonymous SNV 0.330 0 25 hm5C_associated_SNPs_121145 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr16:8729063-8729078
64251 chr17 40937321 40937321 1 + C T STAD 40937320 + 40937300 40937340 41 CTCCTGGCCCACGCCTTCTTCCGCGAGGAGCGCGGTGTGCA CTCCTGGCCCACGCCTTCTTCTGCGAGGAGCGCGGTGTGCA < 41bp 0.456962571840308 0.716990954907351 0.43036014 0.2173028 prediction 0.433981909814702 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40937320 chr17:40937321 nonsynonymous SNV 0.959 1 22 hm5C_associated_SNPs_121147 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40937294-40937332
64251 chr22 24121441 24121441 1 + C T rs142328740 24121440 + 24121420 24121460 41 ATGCAGCCCTGCCCAGTAGCCCGGCACCTGCCCCTGCCACG ATGCAGCCCTGCCCAGTAGCCTGGCACCTGCCCCTGCCACG < 41bp 0.517243262146645 0.734232235330059 0.8501236 0.779724 prediction 0.433977946366828 Functional Gain - MMP11 ENSG00000099953 CDS Human protein_coding chr22:24121440 chr22:24121441 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_121148 0 0 2 DDX3X POSTAR2 ENCODE chr22:24121364-24121531
64251 chr20 2945759 2945759 1 + C T rs1178027 2945758 + 2945738 2945778 41 CACCAAATGGAACGTGGCTTCCAGATAACCAGTTCACGGAT CACCAAATGGAACGTGGCTTCTAGATAACCAGTTCACGGAT < 41bp 0.552209726800678 0.769197495550001 0.38785663 0.238707 prediction 0.433975537498646 Functional Gain - PTPRA ENSG00000132670 CDS Human protein_coding chr20:2945758 chr20:2945759 nonsynonymous SNV 0.987 0 22 hm5C_associated_SNPs_121149 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:2945730-2945761
64251 chr12 113435356 113435356 1 + T G COAD 113435353 + 113435333 113435373 41 AAAAATCAAGGATTTACCCTCGCTGTCTCCGTATGCCCTGG AAAAATCAAGGATTTACCCTCGCGGTCTCCGTATGCCCTGG < 41bp 0.314095791278799 0.716977734866652 0.12179637 0.5421928 prediction 0.433955469733305 Functional Gain - OAS2 ENSG00000111335 CDS Human protein_coding chr12:113435353 chr12:113435356 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_121154 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr12:113435353-113435369
64251 chr4 103806379 103806379 1 + A G COAD 103806376 + 103806356 103806396 41 CACATCTACATGTTTAGTTTCAGAATGGCTTCGGTTATTGC CACATCTACATGTTTAGTTTCAGGATGGCTTCGGTTATTGC < 41bp 0.536179002674465 0.753152514603925 0.7873385 0.90427166 prediction 0.433947023858921 Functional Gain - CISD2 ENSG00000145354 CDS Human protein_coding chr4:103806376 chr4:103806379 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_121155 0 0 2 RPS3 POSTAR2 ENCODE chr4:103806372-103806464
64251 chrX 117880927 117880927 1 + C T COAD 117880926 + 117880906 117880946 41 TCTAACCTTAGAAAATAGCTCCGGAAACTCGTCGTTCAATA TCTAACCTTAGAAAATAGCTCTGGAAACTCGTCGTTCAATA < 41bp 0.573951804024442 0.790923474556783 0.21089616 0.12633604 prediction 0.433943341064681 Functional Gain - IL13RA1 ENSG00000131724 CDS Human protein_coding chrX:117880926 chrX:117880927 nonsynonymous SNV 0.963 1 22 hm5C_associated_SNPs_121156 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:117880921-117881020
64251 chr2 54001499 54001499 1 + T A STAD 54001495 + 54001475 54001515 41 CTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGT CTCTGGAAGACATTGCTGAACAAAATTTTAATGCAGCTGGT < 41bp 0.437480681813947 0.716969317991665 0.18639028 0.16897497 prediction 0.43393863598333 Functional Gain - CHAC2 ENSG00000143942 CDS Human protein_coding chr2:54001495 chr2:54001499 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_121157 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:54001466-54001506
64251 chr1 44437514 44437514 1 + A G UCEC 44437511 + 44437491 44437531 41 TGACTCAGGCTGCTGGCAAGCGTAGCTATGTGTTGGCCCTG TGACTCAGGCTGCTGGCAAGCGTGGCTATGTGTTGGCCCTG < 41bp 0.47148961317317 0.716953427037545 0.6245634 0.83320415 prediction 0.43390685407509 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437511 chr1:44437514 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_121162 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44437492-44437515
64251 chrX 56590932 56590932 1 + C G PAAD 56590931 + 56590911 56590951 41 GGCAGCTCATTATGGCTAATCCACAGATGCAGCAATTGATT GGCAGCTCATTATGGCTAATCGACAGATGCAGCAATTGATT < 41bp 0.398208387853942 0.716938887223814 0.15658382 0.4136694 prediction 0.433877774447628 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590931 chrX:56590932 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121166 0 0 4 MOV10 POSTAR2 GSE37524,GSM921128 chrX:56590915-56590936
64251 chr7 5103771 5103771 1 + A G LUSC 5103768 + 5103748 5103788 41 ATTGCTCATAAGAGAGCTTACATAGGGGAGAAGCCCTATGA ATTGCTCATAAGAGAGCTTACATGGGGGAGAAGCCCTATGA < 41bp 0.483157773523664 0.716938112374832 0.18422595 0.80018055 prediction 0.433876224749663 Functional Gain - RBAK ENSG00000146587 CDS Human protein_coding chr7:5103768 chr7:5103771 nonsynonymous SNV 0.123 0 24 hm5C_associated_SNPs_121167 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr7:5103759-5103813
64251 chr2 85857868 85857868 1 + C T UCEC 85857867 + 85857847 85857887 41 CTATCTAATGTTCCTCCTCTCCGGAACTACTTTCTGGAAGA CTATCTAATGTTCCTCCTCTCTGGAACTACTTTCTGGAAGA < 41bp 0.593521091629103 0.810458533625679 0.31263685 0.21124816 prediction 0.433874883993152 Functional Gain - USP39 ENSG00000168883 CDS Human protein_coding chr2:85857867 chr2:85857868 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_121168 0 0 16 CPSF3 POSTAR2 GSE37401,GSM917668 chr2:85857844-85857880
64251 chr17 27182065 27182065 1 + A G rs568461353 27182062 + 27182042 27182082 41 TTGCGGCTGTAATGGCTGCCCCCAGCTGGCGCGGGGCTAGG TTGCGGCTGTAATGGCTGCCCCCGGCTGGCGCGGGGCTAGG < 41bp 0.468361120468063 0.716917642685243 0.09494954 0.2482199 prediction 0.433835285370487 Functional Gain - ERAL1 ENSG00000132591 CDS Human protein_coding chr17:27182062 chr17:27182065 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_121177 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585673 chr17:27182039-27182066
64251 chr22 21799964 21799964 1 + C A SKCM 21799963 + 21799943 21799983 41 CCCACCCTTGCCCCCTGCCACCCCAGGTCCCCACCTCACTC CCCACCCTTGCCCCCTGCCACACCAGGTCCCCACCTCACTC < 41bp 0.455675028821413 0.716912278878948 0.27457964 0.28240106 prediction 0.433824557757895 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799963 chr22:21799964 synonymous SNV . 0 22 hm5C_associated_SNPs_121178 0 0 3 RBM15 POSTAR2 GSE78030,GSM2064710 chr22:21799963-21799964
64251 chr19 2917612 2917612 1 + T C rs10410539 2917609 + 2917589 2917629 41 CGAGTCCACATGAGGATCCACACTGGGGACAAACTCTATAA CGAGTCCACATGAGGATCCACACCGGGGACAAACTCTATAA < 41bp 0.511298209458853 0.728196473678126 0.008002073 0.011690646 prediction 0.433796528438547 Functional Gain - ZNF57 ENSG00000171970 CDS Human protein_coding chr19:2917609 chr19:2917612 synonymous SNV . 0 24 hm5C_associated_SNPs_121180 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:2917588-2917631
64251 chr12 6647448 6647448 1 + C A rs141846451 6647444 + 6647424 6647464 41 ACCACACTGAATCTCCCCTCCTCACAGTTGCCATGTAGACC ACCACACTGAATCTCCCCTCCTCAAAGTTGCCATGTAGACC < 41bp 0.306127073406539 0.716890898233078 0.055608302 0.19427264 prediction 0.433781796466156 Functional Gain - GAPDH ENSG00000269968 ncRNA_exonic Human antisense chr12:6647444 chr12:6647448 . . 0 25 hm5C_associated_SNPs_121183 0 0 37 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:6647440-6647480
64251 chr12 110152337 110152337 1 + C G rs191257919 110152336 + 110152316 110152356 41 AGCGCGGGCGGAGAGGGCGCCCTGGGAGCGGCGCGGGCCGA AGCGCGGGCGGAGAGGGCGCCGTGGGAGCGGCGCGGGCCGA < 41bp 0.647394192206848 0.864284976226522 0.88638186 0.9205915 prediction 0.433781568039349 Functional Gain - FAM222A ENSG00000139438 UTR5 Human protein_coding chr12:110152336 chr12:110152337 . . 0 22 hm5C_associated_SNPs_121184 0 0 2 DDX3X POSTAR2 ENCODE chr12:110152282-110152360
64251 chr20 34091637 34091637 1 + C G PRAD 34091636 + 34091616 34091656 41 GAGGCCCAGAGAGCCCTAGCCCAGAGGGACCAGGAACTGGA GAGGCCCAGAGAGCCCTAGCCGAGAGGGACCAGGAACTGGA < 41bp 0.402639278735713 0.716882619992379 0.41477287 0.54224557 prediction 0.433765239984758 Functional Gain - CEP250 ENSG00000126001 CDS Human protein_coding chr20:34091636 chr20:34091637 nonsynonymous SNV 0.028 0 22 hm5C_associated_SNPs_121189 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr20:34091620-34091640
64251 chr6 160174535 160174535 1 + C T UCEC 160174534 + 160174514 160174554 41 GCGAAGTGTCGAATGCTTATCCAGGAGAATCAAGAGCTTGG GCGAAGTGTCGAATGCTTATCTAGGAGAATCAAGAGCTTGG < 41bp 0.491828237560062 0.716875960713586 0.86726046 0.5234705 prediction 0.433751921427173 Functional Gain - WTAP ENSG00000146457 CDS Human protein_coding chr6:160174534 chr6:160174535 stopgain 1.000 1 22 hm5C_associated_SNPs_121195 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:160174509-160174542
64251 chr19 42791264 42791264 1 + C G rs373070248 42791263 + 42791243 42791283 41 ATGCCCTGAGAGCCCAGGACCCGGACCCCCACACCCTTTGG ATGCCCTGAGAGCCCAGGACCGGGACCCCCACACCCTTTGG < 41bp 0.667906780742647 0.884779555340976 0.56741506 0.8930646 prediction 0.433745549196657 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42791263 chr19:42791264 synonymous SNV . 0 22 hm5C_associated_SNPs_121199 0 0 2 FMR1 POSTAR2 ENCODE chr19:42791217-42791290
64251 chr19 45848851 45848851 1 + C G LUSC 45848850 + 45848830 45848870 41 GCAGGGCTGGGCCCAGAGCGCCTGAGCCCTGAGGAGCTGGT GCAGGGCTGGGCCCAGAGCGCGTGAGCCCTGAGGAGCTGGT < 41bp 0.39581438519398 0.716869617202243 0.23334971 0.6125047 prediction 0.433739234404486 Functional Gain - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45848850 chr19:45848851 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_121202 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:45848845-45848887
64251 chr8 17417930 17417930 1 + C A UVM 17417929 + 17417909 17417949 41 GGTAACCTCGAAGAGTGAGTCCCAGGTCACCATGCTGCAGA GGTAACCTCGAAGAGTGAGTCACAGGTCACCATGCTGCAGA < 41bp 0.45021825342921 0.716865461404734 0.08104992 0.3806615 prediction 0.433730922809467 Functional Gain - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17417929 chr8:17417930 synonymous SNV . 0 22 hm5C_associated_SNPs_121207 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:17417913-17417945
64251 chr1 100758155 100758155 1 + T A rs11581889 100758151 + 100758131 100758171 41 ACAGGCATGAGCCACCACAGCTGGTCGTAAATATTTTTTGA ACAGGCATGAGCCACCACAGCTGGACGTAAATATTTTTTGA < 41bp 0.627945153863134 0.844788208933332 0.3035981 0.39936167 prediction 0.433686110140396 Functional Gain - RTCA ENSG00000137996 UTR3 Human protein_coding chr1:100758151 chr1:100758155 . . 0 25 hm5C_associated_SNPs_121213 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:100758136-100758185
64251 chr15 43663591 43663591 1 + T C CESC 43663589 + 43663569 43663609 41 TCTTGGCTCTGAGCGGGTACCCTGGGTCCATTTTCACCTGG TCTTGGCTCTGAGCGGGTACCCCGGGTCCATTTTCACCTGG < 41bp 0.591797825714042 0.808638949340024 0.84529996 0.9035026 prediction 0.433682247251963 Functional Gain - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43663589 chr15:43663591 synonymous SNV . 0 23 hm5C_associated_SNPs_121215 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:43663555-43663593
64251 chr21 48081715 48081715 1 + C A UCEC 48081714 + 48081694 48081734 41 GTCATCTGCTTGACCCAGACCCTGAGGGGCGAGCTGCGCTT GTCATCTGCTTGACCCAGACCATGAGGGGCGAGCTGCGCTT < 41bp 0.474515743744779 0.716840365243863 0.15707472 0.28280365 prediction 0.433680730487726 Functional Gain - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48081714 chr21:48081715 nonsynonymous SNV 0.446 0 22 hm5C_associated_SNPs_121216 0 0 1 NONO POSTAR2 ENCODE chr21:48081669-48081758
64251 chr3 63981466 63981466 1 + C A UCEC 63981462 + 63981442 63981482 41 TTCATCCTCATCCCCTTCCACGCCCTCTGGCCTTTCCTCGG TTCATCCTCATCCCCTTCCACGCCATCTGGCCTTTCCTCGG < 41bp 0.27736826025807 0.716835875159492 0.0289267 0.1064004 prediction 0.433671750318984 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63981462 chr3:63981466 synonymous SNV . 0 25 hm5C_associated_SNPs_121219 0 0 3 PCBP2 POSTAR2 ENCODE chr3:63981440-63981511
64251 chr8 118533124 118533124 1 + C T HNSC 118533123 + 118533103 118533143 41 CTGCAGCCGCGCCATGTCCACCCCTCCGTTGGCCGCGTCGG CTGCAGCCGCGCCATGTCCACTCCTCCGTTGGCCGCGTCGG < 41bp 0.526543886929726 0.743374352690579 0.113037616 0.13695404 prediction 0.433660931521704 Functional Gain - MED30 ENSG00000164758 CDS Human protein_coding chr8:118533123 chr8:118533124 synonymous SNV . 0 22 hm5C_associated_SNPs_121226 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:118533099-118533134
64251 chr6 43008794 43008794 1 + C T LUAD 43008793 + 43008773 43008813 41 TGGATCTGCTGGTCAATGTGCCGGGCGAACTGCTCACTCAC TGGATCTGCTGGTCAATGTGCTGGGCGAACTGCTCACTCAC < 41bp 0.504206300454811 0.721031182052469 0.9413954 0.92424315 prediction 0.433649763195316 Functional Gain - CUL7 ENSG00000044090 CDS Human protein_coding chr6:43008793 chr6:43008794 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_121228 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:43008788-43008809
64251 chr4 145567970 145567970 1 + T C LUAD 145567968 + 145567948 145567988 41 AATGGGAACCCCCCGAAGCGCCTGAAAAGGAGAGACAGGAG AATGGGAACCCCCCGAAGCGCCCGAAAAGGAGAGACAGGAG < 41bp 0.607985542612661 0.824804245451008 0.067510486 0.058336794 prediction 0.433637405676695 Functional Gain - HHIP ENSG00000164161 CDS Human protein_coding chr4:145567968 chr4:145567970 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_121231 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr4:145567970-145567971
64251 chr2 239076837 239076837 1 + A G rs114462125 239076834 + 239076814 239076854 41 TGGGGATGGGGACGGCAGCTCTCATGAGGACACACAGGCTG TGGGGATGGGGACGGCAGCTCTCGTGAGGACACACAGGCTG < 41bp 0.551521890639351 0.768337732182469 0.253651 0.21877825 prediction 0.433631683086236 Functional Gain - ERFE ENSG00000178752 UTR3 Human protein_coding chr2:239076834 chr2:239076837 . . 0 24 hm5C_associated_SNPs_121232 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr2:239076831-239076858
64251 chr3 10191480 10191480 1 + T C KIRC 10191477 + 10191457 10191497 41 TTTTGCCCTTCCAGTGTATACTCTGAAAGAGCGATGCCTCC TTTTGCCCTTCCAGTGTATACTCCGAAAGAGCGATGCCTCC < 41bp 0.529680661885424 0.746485236491738 0.07180339 0.18543783 prediction 0.433609149212629 Functional Gain - VHL ENSG00000134086 CDS Human protein_coding chr3:10191477 chr3:10191480 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_121238 3 0 26 CPSF6 POSTAR2 GSE37401,GSM917665 chr3:10191444-10191614
64251 chr16 15131131 15131131 1 + C G rs183664534 15131130 + 15131110 15131150 41 CACTGCCCGTTCCTACTTTTCCGAAGTACTGCGTCACTTTG CACTGCCCGTTCCTACTTTTCGGAAGTACTGCGTCACTTTG < 41bp 0.432267737009584 0.716804546582527 0.90290594 0.94363534 prediction 0.433609093165054 Functional Gain - PDXDC1 ENSG00000179889 UTR3 Human protein_coding chr16:15131130 chr16:15131131 . . 0 22 hm5C_associated_SNPs_121239 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:15131087-15131141
64251 chr15 41247948 41247948 1 + C T rs75888775 41247947 + 41247927 41247967 41 GTTGCCCTGCTTCTGCCCCACCGAGCAGGCTCTGGCGCTGG GTTGCCCTGCTTCTGCCCCACTGAGCAGGCTCTGGCGCTGG < 41bp 0.537993339174853 0.75476256606777 0.1723901 0.22833955 prediction 0.433538453785833 Functional Gain - CHAC1 ENSG00000128965 CDS Human protein_coding chr15:41247947 chr15:41247948 synonymous SNV . 0 22 hm5C_associated_SNPs_121244 0 0 2 RBM15 POSTAR2 ENCODE chr15:41247932-41247992
64251 chr10 105762964 105762964 1 + T G READ 105762961 + 105762941 105762981 41 GTTCAGGATGCTTCTAAAGTCACTACTCAGATAGATAAAGA GTTCAGGATGCTTCTAAAGTCACGACTCAGATAGATAAAGA < 41bp 0.358912309350988 0.716768992774373 0.025873035 0.013598949 prediction 0.433537985548746 Functional Gain - SLK ENSG00000065613 CDS Human protein_coding chr10:105762961 chr10:105762964 synonymous SNV . 0 24 hm5C_associated_SNPs_121245 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:105762960-105762980
64251 chr10 101605425 101605425 1 + A G UCEC 101605422 + 101605402 101605442 41 GGAGCTGGAAAGTCATCCCTCACAAACTGCCTCTTCAGAAT GGAGCTGGAAAGTCATCCCTCACGAACTGCCTCTTCAGAAT < 41bp 0.574107943087332 0.790869763281231 0.108911216 0.21864045 prediction 0.433523640387798 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101605422 chr10:101605425 synonymous SNV . 0 24 hm5C_associated_SNPs_121249 0 0 6 EIF3H POSTAR2 ENCODE chr10:101605381-101605429
64251 chr22 32257418 32257418 1 + A G COAD 32257415 + 32257395 32257435 41 AGCATCGTCCGCCTTCTACCCTCAGGTTAGTCCAACTCCAG AGCATCGTCCGCCTTCTACCCTCGGGTTAGTCCAACTCCAG < 41bp 0.528192460543426 0.744949549463187 0.15055886 0.5243864 prediction 0.433514177839522 Functional Gain - DEPDC5 ENSG00000100150 CDS Human protein_coding chr22:32257415 chr22:32257418 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_121250 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr22:32257418-32257439
64251 chr11 64030275 64030275 1 + C T SKCM 64030274 + 64030254 64030294 41 GACGAAGAGCCCTTCGACTTCCCCAAGGTGAGCCTGGCCCC GACGAAGAGCCCTTCGACTTCTCCAAGGTGAGCCTGGCCCC < 41bp 0.632287311970167 0.84903141523427 0.18598256 0.9415822 prediction 0.433488206528206 Functional Gain - PLCB3 ENSG00000149782 CDS Human protein_coding chr11:64030274 chr11:64030275 nonsynonymous SNV 0.993 2 22 hm5C_associated_SNPs_121256 0 0 2 PRPF8 POSTAR2 ENCODE chr11:64030270-64030321
64251 chr1 45478860 45478860 1 + T G SKCM 45478858 + 45478838 45478878 41 TTTTCAGCACGTGTCGCTCTCCTGAGGCCTGCTGTGAACTG TTTTCAGCACGTGTCGCTCTCCGGAGGCCTGCTGTGAACTG < 41bp 0.689563854195353 0.906304434560448 0.6442385 0.9350897 prediction 0.433481160730189 Functional Gain - UROD ENSG00000126088 CDS Human protein_coding chr1:45478858 chr1:45478860 synonymous SNV . 0 23 hm5C_associated_SNPs_121257 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:45478840-45478860
64251 chr14 101538472 101538472 1 + C A rs10141509 101538468 + 101538448 101538488 41 TGGAAGGAAAGGAAGAGAAACGGGCGGGTGGCCTGACACCC TGGAAGGAAAGGAAGAGAAACGGGAGGGTGGCCTGACACCC < 41bp 0.705395428590785 0.922129577537623 0.8937489 0.9058309 prediction 0.433468297893677 Functional Gain - MEG9 ENSG00000223403 ncRNA_exonic Human lincRNA chr14:101538468 chr14:101538472 . . 0 25 hm5C_associated_SNPs_121258 0 0 2 DGCR8 POSTAR2 ENCODE chr14:101538468-101538508
64251 chr20 1918415 1918415 1 + C A rs73071223 1918414 + 1918394 1918434 41 GCAGCCACGGCCCCCTCCCCCCACATTGCCACATACCTGGA GCAGCCACGGCCCCCTCCCCCAACATTGCCACATACCTGGA < 41bp 0.454059053411705 0.716731908837457 0.04935202 0.21102941 prediction 0.433463817674914 Functional Gain - SIRPA ENSG00000198053 UTR3 Human protein_coding chr20:1918414 chr20:1918415 . . 0 22 hm5C_associated_SNPs_121259 0 0 1 PCBP2 POSTAR2 ENCODE chr20:1918361-1918418
64251 chr4 15005228 15005228 1 + C G rs368903858 15005224 + 15005204 15005244 41 TCCTCGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTC TCCTCGACGCCGGTGAACCCCGCGGCGGGCTCCATGGAGTC < 41bp 0.653279921291772 0.87001082586499 0.17178446 0.5437114 prediction 0.433461809146437 Functional Gain - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15005224 chr4:15005228 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_121260 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:15005192-15005231
64251 chr19 808628 808628 1 + C T SKCM 808627 + 808607 808647 41 GCACCAGAACGTGCAGCTGCCCCGCGAGGGCCAGGAGGACC GCACCAGAACGTGCAGCTGCCTCGCGAGGGCCAGGAGGACC < 41bp 0.44981549917649 0.716719335671294 0.05182013 0.048980474 prediction 0.433438671342589 Functional Gain - PTBP1 ENSG00000011304 CDS Human protein_coding chr19:808627 chr19:808628 synonymous SNV . 0 22 hm5C_associated_SNPs_121262 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:808612-808648
64251 chrX 101971084 101971084 1 + C A KIRC 101971083 + 101971063 101971103 41 GTACTGGGCTGAGGAAAAGTCCAGTTTGGGGGCTGTGGCCA GTACTGGGCTGAGGAAAAGTCAAGTTTGGGGGCTGTGGCCA < 41bp 0.622968811633746 0.839679613139484 0.75447273 0.85574865 prediction 0.433421603011476 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971083 chrX:101971084 synonymous SNV . 0 22 hm5C_associated_SNPs_121263 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:101971084-101971085
64251 chr12 72278653 72278653 1 + A G UCEC 72278650 + 72278630 72278670 41 TCCTGTTCAGTTTGACAGACCTGAAATCAATCAAGCAAAAC TCCTGTTCAGTTTGACAGACCTGGAATCAATCAAGCAAAAC < 41bp 0.493488353958608 0.716709073505969 0.046556383 0.019234538 prediction 0.433418147011937 Functional Gain - TBC1D15 ENSG00000121749 CDS Human protein_coding chr12:72278650 chr12:72278653 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_121264 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350200 chr12:72278637-72278657
64251 chr6 43096813 43096813 1 + C T SKCM 43096812 + 43096792 43096832 41 TGTGAGGTTGAGGCTCCGGGCCCGGTACATGTGTACTGGCT TGTGAGGTTGAGGCTCCGGGCTCGGTACATGTGTACTGGCT < 41bp 0.58053643761712 0.797242923483778 0.28360754 0.27636695 prediction 0.433412971733316 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43096812 chr6:43096813 nonsynonymous SNV 0.053 0 22 hm5C_associated_SNPs_121265 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr6:43096795-43096819
64251 chrX 142967238 142967238 1 + C A LGG 142967237 + 142967217 142967257 41 CCACAGGATCATCAAGGAAACCCAGCGTTTGCTGGCAGAGC CCACAGGATCATCAAGGAAACACAGCGTTTGCTGGCAGAGC < 41bp 0.470682625851558 0.716693360118694 0.08128944 0.04300791 prediction 0.433386720237388 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967237 chrX:142967238 synonymous SNV . 0 22 hm5C_associated_SNPs_121271 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:142967220-142967245
64251 chr3 142838916 142838916 1 + C A rs72551380 142838912 + 142838892 142838932 41 CATCCTCCCGGTGATGGAAGCAGCCGCCGCCGCCGCTGCGG CATCCTCCCGGTGATGGAAGCAGCAGCCGCCGCCGCTGCGG < 41bp 0.690724290493976 0.90741618397394 0.8170669 0.8370397 prediction 0.433383786959927 Functional Gain - CHST2 ENSG00000175040 UTR5 Human protein_coding chr3:142838912 chr3:142838916 . . 0 25 hm5C_associated_SNPs_121273 0 0 6 DDX3X POSTAR2 ENCODE chr3:142838742-142838991
64251 chr10 64565561 64565561 1 + C T SKCM 64565560 + 64565540 64565580 41 CTGCCTCGAGAGGTGTGGCTCCTGGAGACCCCACAGGCCGA CTGCCTCGAGAGGTGTGGCTCTTGGAGACCCCACAGGCCGA < 41bp 0.486740179846056 0.71666513730051 0.8085475 0.40628594 prediction 0.433330274601021 Functional Gain - ADO ENSG00000181915 CDS Human protein_coding chr10:64565560 chr10:64565561 synonymous SNV . 0 22 hm5C_associated_SNPs_121282 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:64565557-64565579
64251 chr16 2136297 2136297 1 + C T PAAD 2136296 + 2136276 2136316 41 TCGAGCTGAAGGACTGCCAGCCGGACAAGGTGTACCTGGGA TCGAGCTGAAGGACTGCCAGCTGGACAAGGTGTACCTGGGA < 41bp 0.472168011668076 0.716658804947421 0.27318758 0.1905956 prediction 0.433317609894842 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2136296 chr16:2136297 nonsynonymous SNV 0.972 5 22 hm5C_associated_SNPs_121284 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:2136283-2136323
64251 chr22 45996279 45996279 1 + C T SKCM 45996278 + 45996258 45996298 41 GTCGGGGGCGTGGTCTCCCACCGAAATGTTGTCAACGTCCA GTCGGGGGCGTGGTCTCCCACTGAAATGTTGTCAACGTCCA < 41bp 0.598616007723868 0.815272661203074 0.05387965 0.15610614 prediction 0.433313306958412 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45996278 chr22:45996279 stopgain 0.977 1 22 hm5C_associated_SNPs_121285 0 0 1 SND1 POSTAR2 ENCODE chr22:45996253-45996283
64251 chr19 42584699 42584699 1 + C T HNSC 42584698 + 42584678 42584718 41 CTGTGGGGCTGCCTTCCCCTCCTCACTGCGGCTCCGGGAGC CTGTGGGGCTGCCTTCCCCTCTTCACTGCGGCTCCGGGAGC < 41bp 0.482577390522436 0.716654418535774 0.33987582 0.43046916 prediction 0.433308837071548 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42584698 chr19:42584699 synonymous SNV . 0 22 hm5C_associated_SNPs_121287 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:42584671-42584704
64251 chr15 90808958 90808958 1 + T C UCEC 90808956 + 90808936 90808976 41 TGCGTCGACATGGCGGTTACCCTGAGTCTCTTGCTGGGCGG TGCGTCGACATGGCGGTTACCCCGAGTCTCTTGCTGGGCGG < 41bp 0.584816456107338 0.801469667248696 0.46229053 0.6665034 prediction 0.433306422282716 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90808956 chr15:90808958 nonsynonymous SNV 0.009 1 23 hm5C_associated_SNPs_121289 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr15:90808918-90808959
64251 chr9 2056843 2056843 1 + C T SKCM 2056842 + 2056822 2056862 41 AGGAAACGCCGTCAGAAACACCAGGTTCTTAGACCCTGGGC AGGAAACGCCGTCAGAAACACTAGGTTCTTAGACCCTGGGC < 41bp 0.471770929356215 0.716644835802393 0.7703717 0.30598357 prediction 0.433289671604785 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2056842 chr9:2056843 stopgain 0.988 1 22 hm5C_associated_SNPs_121293 0 0 2 AGGF1 POSTAR2 ENCODE chr9:2056777-2056854
64251 chrX 54957741 54957741 1 + T G UCEC 54957738 + 54957718 54957758 41 TGTCCACACAGCAGTCAAGGCAGTTATGGCCAATCAGCTGA TGTCCACACAGCAGTCAAGGCAGGTATGGCCAATCAGCTGA < 41bp 0.341951521206047 0.71663237133521 0.16875589 0.42489225 prediction 0.43326474267042 Functional Gain - TRO ENSG00000067445 CDS Human protein_coding chrX:54957738 chrX:54957741 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_121297 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chrX:54957733-54957754
64251 chr1 82450323 82450323 1 + A G UCEC 82450320 + 82450300 82450340 41 TCATACTGCTGTGGAGGCCTCCCAACTGAGAGTCCCCACAG TCATACTGCTGTGGAGGCCTCCCGACTGAGAGTCCCCACAG < 41bp 0.505527688956489 0.722155733783988 0.35019362 0.09437841 prediction 0.433256089654998 Functional Gain - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82450320 chr1:82450323 synonymous SNV . 0 24 hm5C_associated_SNPs_121298 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr1:82450289-82450324
64251 chr19 39915896 39915896 1 + A G rs199999525 39915893 + 39915873 39915913 41 CACAGGAATCTATGGGCCTTCACAGGGCCCAGGGGGCTCCT CACAGGAATCTATGGGCCTTCACGGGGCCCAGGGGGCTCCT < 41bp 0.579713542077038 0.796333095320689 0.1549272 0.8003503 prediction 0.433239106487304 Functional Gain - PLEKHG2 ENSG00000090924 CDS Human protein_coding chr19:39915893 chr19:39915896 nonsynonymous SNV 0.920 0 24 hm5C_associated_SNPs_121300 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:39915866-39915898
64251 chr16 85111052 85111052 1 + C T COAD 85111051 + 85111031 85111071 41 GAAAACCACAGCTGCTGCCCCCGGAGTCCCGGGAGAAGCCC GAAAACCACAGCTGCTGCCCCTGGAGTCCCGGGAGAAGCCC < 41bp 0.600445869065097 0.817063714890849 0.7451956 0.3745737 prediction 0.433235691651504 Functional Gain - KIAA0513 ENSG00000135709 CDS Human protein_coding chr16:85111051 chr16:85111052 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_121301 0 0 1 BUD13 POSTAR2 ENCODE chr16:85111010-85111117
64251 chr15 85341836 85341836 1 + C T SKCM 85341835 + 85341815 85341855 41 CCAGAGCACCCACGGTGTTCCCCGAAATGTGGACGAGCTGT CCAGAGCACCCACGGTGTTCCTCGAAATGTGGACGAGCTGT < 41bp 0.452887205780709 0.716613409059865 0.30653837 0.9425419 prediction 0.433226818119731 Functional Gain - ZNF592 ENSG00000166716 CDS Human protein_coding chr15:85341835 chr15:85341836 synonymous SNV . 0 22 hm5C_associated_SNPs_121302 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:85341816-85341849
64251 chr1 226016459 226016459 1 + T G COAD 226016456 + 226016436 226016476 41 GCTAGAAATCCTCCTCACTTCAGTGCTGGGCTTTGCCATCT GCTAGAAATCCTCCTCACTTCAGGGCTGGGCTTTGCCATCT < 41bp 0.718096802525305 0.934700993655573 0.39325714 0.8967672 prediction 0.433208382260536 Functional Gain - EPHX1 ENSG00000143819 CDS Human protein_coding chr1:226016456 chr1:226016459 nonsynonymous SNV 0.784 0 24 hm5C_associated_SNPs_121303 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:226016452-226016477
64251 chr19 45682563 45682563 1 + C T SKCM 45682562 + 45682542 45682582 41 CTAGTTCGGTGCCATGGCGTCCCAGGGTCGTCGGCGGAGGC CTAGTTCGGTGCCATGGCGTCTCAGGGTCGTCGGCGGAGGC < 41bp 0.553181929609576 0.769782556370063 0.33977687 0.22756654 prediction 0.433201253520974 Functional Gain - BLOC1S3 ENSG00000189114 CDS Human protein_coding chr19:45682562 chr19:45682563 synonymous SNV . 0 22 hm5C_associated_SNPs_121304 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:45682545-45682571
64251 chr4 177241254 177241254 1 + C G UCS 177241250 + 177241230 177241270 41 GAACACGGTGCTGTCGCGGGCGAACTCACTGTTCGCCTTCT GAACACGGTGCTGTCGCGGGCGAAGTCACTGTTCGCCTTCT < 41bp 0.437898823033296 0.716599690799764 0.26356852 0.5011424 prediction 0.433199381599528 Functional Gain - SPCS3 ENSG00000129128 CDS Human protein_coding chr4:177241250 chr4:177241254 nonsynonymous SNV 0.983 4 25 hm5C_associated_SNPs_121306 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:177241207-177241290
64251 chr19 15807031 15807031 1 + C T SKCM 15807030 + 15807010 15807050 41 ACCCAACTGTGTGGCCGGATCCTGAGGTGCTGCCTTCCCCA ACCCAACTGTGTGGCCGGATCTTGAGGTGCTGCCTTCCCCA < 41bp 0.593500494635866 0.810097588668995 0.71673965 0.4979138 prediction 0.433194188066258 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807030 chr19:15807031 nonsynonymous SNV 0.967 2 22 hm5C_associated_SNPs_121308 0 0 7 GRWD1 POSTAR2 ENCODE chr19:15806992-15807064
64251 chr3 111711656 111711656 1 + C A rs76853389 111711655 + 111711635 111711675 41 GGAAACCAGCAGATAGTAAACCTGGTTCAAAGTACAATTCA GGAAACCAGCAGATAGTAAACATGGTTCAAAGTACAATTCA < 41bp 0.559774621031167 0.776369121163084 0.89132416 0.88970745 prediction 0.433189000263835 Functional Gain - ABHD10 ENSG00000144827 UTR3 Human protein_coding chr3:111711655 chr3:111711656 . . 0 22 hm5C_associated_SNPs_121309 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:111711636-111711666
64251 chr1 84956031 84956031 1 + C T STAD 84956030 + 84956010 84956050 41 ACGACTCTGTGAACAGCTCTCCACAGTTATACCAAACTCAC ACGACTCTGTGAACAGCTCTCTACAGTTATACCAAACTCAC < 41bp 0.615388503369016 0.83198172547932 0.028423965 0.0779472 prediction 0.43318644422061 Functional Gain - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84956030 chr1:84956031 synonymous SNV . 0 22 hm5C_associated_SNPs_121311 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:84956006-84956036
64251 chr5 137767233 137767233 1 + T C PAAD 137767231 + 137767211 137767251 41 TCTCTAACACTCATACAAATCATGAGGATAAACTGCAGGTA TCTCTAACACTCATACAAATCACGAGGATAAACTGCAGGTA < 41bp 0.460821236209281 0.716590733502073 0.16385955 0.16514045 prediction 0.433181467004146 Functional Gain - KDM3B ENSG00000120733 CDS Human protein_coding chr5:137767231 chr5:137767233 synonymous SNV . 0 23 hm5C_associated_SNPs_121312 0 0 19 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137767198-137767233
64251 chr12 56428793 56428793 1 + C T SKCM 56428792 + 56428772 56428812 41 CCCTCCCTCAGGGTCCCCCACCCCAGCCACCTCCCACCATT CCCTCCCTCAGGGTCCCCCACTCCAGCCACCTCCCACCATT < 41bp 0.442260424063806 0.716587803424956 0.2434754 0.94857836 prediction 0.433175606849913 Functional Gain - IKZF4 ENSG00000123411 CDS Human protein_coding chr12:56428792 chr12:56428793 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_121314 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:56428778-56428804
64251 chr11 43911304 43911304 1 + T C STAD 43911302 + 43911282 43911322 41 TTGTATCCTGGCTTTGTTGACGTGAAAGAAGCTGACTGGAT TTGTATCCTGGCTTTGTTGACGCGAAAGAAGCTGACTGGAT < 41bp 0.636217880421746 0.852799819424416 0.61087894 0.8679156 prediction 0.43316387800534 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43911302 chr11:43911304 nonsynonymous SNV 0.083 0 23 hm5C_associated_SNPs_121317 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:43911274-43911326
64251 chrX 102470649 102470649 1 + T G rs773238013 102470647 + 102470627 102470667 41 CTAAGTGTCGCGGCGGCGCACCTCGCGTCAAGAATCCGGAG CTAAGTGTCGCGGCGGCGCACCGCGCGTCAAGAATCCGGAG < 41bp 0.421758287140911 0.716581526005643 0.12217453 0.3299458 prediction 0.433163052011286 Functional Gain - BEX4 ENSG00000102409 UTR5 Human protein_coding chrX:102470647 chrX:102470649 . . 0 23 hm5C_associated_SNPs_121318 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:102470620-102470660
64251 chr2 62449557 62449557 1 + C T PAAD 62449556 + 62449536 62449576 41 CGAGAGCAAGAGAAGCTGAACCGGCAGTACAACCCCATCCT CGAGAGCAAGAGAAGCTGAACTGGCAGTACAACCCCATCCT < 41bp 0.528997825826669 0.745576651934714 0.82749665 0.29209143 prediction 0.43315765221609 Functional Gain - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62449556 chr2:62449557 nonsynonymous SNV 0.970 0 22 hm5C_associated_SNPs_121320 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:62449540-62449560
64251 chr20 62670791 62670791 1 + C G rs2427596 62670790 + 62670770 62670810 41 CTCCGGAGGGGTGACCACGGCCTGGGCTCAGAGACTGCCCA CTCCGGAGGGGTGACCACGGCGTGGGCTCAGAGACTGCCCA < 41bp 0.409811997014579 0.71657718243589 0.4062023 0.7252551 prediction 0.43315436487178 Functional Gain - C20orf204 ENSG00000196421 ncRNA_exonic Human protein_coding chr20:62670790 chr20:62670791 . . 0 22 hm5C_associated_SNPs_121322 0 0 3 CSTF2T POSTAR2 ENCODE chr20:62670768-62670820
64251 chr5 67593407 67593407 1 + T C UCEC 67593404 + 67593384 67593424 41 CAATGTCACACTAGCCTACCCAGTATATGCACAGCAGAGGC CAATGTCACACTAGCCTACCCAGCATATGCACAGCAGAGGC < 41bp 0.505642840461127 0.722208054259835 0.12972683 0.1778307 prediction 0.433130427597418 Functional Gain - PIK3R1 ENSG00000145675 CDS Human protein_coding chr5:67593404 chr5:67593407 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_121326 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr5:67593406-67593407
64251 chr19 34818947 34818947 1 + C T COAD 34818946 + 34818926 34818966 41 CGGGGCGGAGGCAGACACCCCCGCAGCCCATGCAGTGTGAG CGGGGCGGAGGCAGACACCCCTGCAGCCCATGCAGTGTGAG < 41bp 0.618767768376158 0.83533032638076 0.070990324 0.16616374 prediction 0.433125116009205 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34818946 chr19:34818947 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_121327 0 0 1 PPIG POSTAR2 ENCODE chr19:34818894-34818950
64251 chr7 129125534 129125534 1 + T C LUAD 129125531 + 129125511 129125551 41 CCAGGACTCTGAGTTTTCACCTGTGGATAACTGCTTGCAGA CCAGGACTCTGAGTTTTCACCTGCGGATAACTGCTTGCAGA < 41bp 0.516944484474414 0.733504646189249 0.14899394 0.14797819 prediction 0.433120323429672 Functional Gain - STRIP2 ENSG00000128578 CDS Human protein_coding chr7:129125531 chr7:129125534 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_121330 0 0 2 RBM15 POSTAR2 ENCODE chr7:129125513-129125598
64251 chr2 182374408 182374408 1 + C T SKCM 182374407 + 182374387 182374427 41 AGATGTGCGGGACATCCTCACCCCAATTCAGATTGAAGCTG AGATGTGCGGGACATCCTCACTCCAATTCAGATTGAAGCTG < 41bp 0.444401051869348 0.71655899658499 0.08380109 0.9393275 prediction 0.433117993169979 Functional Gain - ITGA4 ENSG00000115232 CDS Human protein_coding chr2:182374407 chr2:182374408 synonymous SNV . 0 22 hm5C_associated_SNPs_121331 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr2:182374397-182374417
64251 chr19 50150056 50150056 1 + C T SKCM 50150055 + 50150035 50150075 41 GCCTGTGCCCAGCCTGCTGCCCCGTCTCAGGGCCTGGAGGA GCCTGTGCCCAGCCTGCTGCCTCGTCTCAGGGCCTGGAGGA < 41bp 0.46657155765725 0.716553019338414 0.009031892 0.012738287 prediction 0.433106038676828 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50150055 chr19:50150056 synonymous SNV . 0 22 hm5C_associated_SNPs_121333 0 0 17 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50150026-50150058
64251 chr20 44575000 44575000 1 + A G UCEC 44574997 + 44574977 44575017 41 TACTGTTCTGCCTTCCCCGACACAGACGGCTACTTTGGCTC TACTGTTCTGCCTTCCCCGACACGGACGGCTACTTTGGCTC < 41bp 0.461703887840158 0.71653590510245 0.24519631 0.41052064 prediction 0.433071810204899 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44574997 chr20:44575000 synonymous SNV . 0 24 hm5C_associated_SNPs_121339 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr20:44574988-44575013
64251 chr22 50316018 50316018 1 + A G rs548409518 50316015 + 50315995 50316035 41 TGTTGGCGTGGCGTGGGCCACGCATGGATCCGTGGCCGGAA TGTTGGCGTGGCGTGGGCCACGCGTGGATCCGTGGCCGGAA < 41bp 0.471123910478625 0.716525158715366 0.30663764 0.45155066 prediction 0.433050317430731 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50316015 chr22:50316018 synonymous SNV . 0 24 hm5C_associated_SNPs_121344 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50315966-50316023
64251 chr19 41822576 41822576 1 + C T STAD 41822575 + 41822555 41822595 41 CTGGTGTTCCTGGAGCGCTTCCGCACAGGCCTCCGTGAGGA CTGGTGTTCCTGGAGCGCTTCTGCACAGGCCTCCGTGAGGA < 41bp 0.623854971727585 0.840378670449506 0.20276535 0.28686765 prediction 0.433047397443841 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822575 chr19:41822576 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_121345 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:41822567-41822589
64251 chr16 2820366 2820366 1 + C T UCEC 2820365 + 2820345 2820385 41 TTCCCCAGGTCCCGCAGCCCCCGGAAGCCAATAGACTCCCT TTCCCCAGGTCCCGCAGCCCCTGGAAGCCAATAGACTCCCT < 41bp 0.598914920391482 0.81543611171861 0.785643 0.8791611 prediction 0.433042382654257 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2820365 chr16:2820366 nonsynonymous SNV 0.896 3 22 hm5C_associated_SNPs_121348 0 0 34 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2820360-2820380
64251 chr17 4789867 4789867 1 + C T HNSC 4789866 + 4789846 4789886 41 CAGCCCACGGAGCGGCAGGTCCGCATCCAGCTTAAGGACCA CAGCCCACGGAGCGGCAGGTCTGCATCCAGCTTAAGGACCA < 41bp 0.482647996754324 0.716509344935448 0.07407242 0.13549149 prediction 0.433018689870897 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4789866 chr17:4789867 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121352 0 0 3 UCHL5 POSTAR2 ENCODE chr17:4789833-4789885
64251 chr9 80880402 80880402 1 + T C UCEC 80880400 + 80880380 80880420 41 CTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAA CTAAAGAAGAAAAGAAGGCGCTCGAAGATGAAAAACCAGAA < 41bp 0.442168757285007 0.716505171254145 0.065265626 0.09166157 prediction 0.433010342508289 Functional Gain - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80880400 chr9:80880402 synonymous SNV . 0 23 hm5C_associated_SNPs_121353 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr9:80880379-80880412
64251 chr5 140038639 140038639 1 + C T UCEC 140038638 + 140038618 140038658 41 GAAAGAGACAGAGACCGTGACCGAGAGCGAGAGCGAGAACG GAAAGAGACAGAGACCGTGACTGAGAGCGAGAGCGAGAACG < 41bp 0.47031702511494 0.716501340998022 0.021780998 0.017192513 prediction 0.433002681996044 Functional Gain - IK ENSG00000113141 CDS Human protein_coding chr5:140038638 chr5:140038639 stopgain 0.992 1 22 hm5C_associated_SNPs_121356 0 0 7 GRWD1 POSTAR2 ENCODE chr5:140038598-140038662
64251 chr17 4619471 4619471 1 + C A LGG 4619470 + 4619450 4619490 41 GTGCTTGTGGACCCTGACTACCTGAAGGACCGCAAAGGTAC GTGCTTGTGGACCCTGACTACATGAAGGACCGCAAAGGTAC < 41bp 0.453024296805615 0.716496169573086 0.26426652 0.5696163 prediction 0.432992339146171 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4619470 chr17:4619471 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_121359 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4619439-4619473
64251 chr14 24635409 24635409 1 + C T rs150652707 24635408 + 24635388 24635428 41 ATTCTGTCCCTGGTGTAGAGCCTGGGGGACCCATCTTCCAC ATTCTGTCCCTGGTGTAGAGCTTGGGGGACCCATCTTCCAC < 41bp 0.548312353003361 0.764801264831004 0.45041886 0.14122635 prediction 0.432977823655287 Functional Gain - IRF9 ENSG00000213928 CDS Human protein_coding chr14:24635408 chr14:24635409 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_121361 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:24635386-24635431
64251 chr11 31561263 31561263 1 + A G KIRP 31561260 + 31561240 31561280 41 GCTCTTCAAGTATTTCCTGGCAGAAGGAATTGTCAATGGGC GCTCTTCAAGTATTTCCTGGCAGGAGGAATTGTCAATGGGC < 41bp 0.54390012815988 0.760386911813639 0.17742047 0.3161952 prediction 0.432973567307519 Functional Gain - ELP4 ENSG00000109911 CDS Human protein_coding chr11:31561260 chr11:31561263 nonsynonymous SNV 0.960 4 24 hm5C_associated_SNPs_121363 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:31561259-31561301
64251 chr3 179051159 179051159 1 + A G COAD 179051156 + 179051136 179051176 41 TCCTATAGAAGTTCACACTGCTGAAGATGTTCCAATTGCTG TCCTATAGAAGTTCACACTGCTGGAGATGTTCCAATTGCTG < 41bp 0.525148187759912 0.741633325367945 0.17946795 0.39699805 prediction 0.432970275216066 Functional Gain - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179051156 chr3:179051159 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_121364 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:179051133-179051161
64251 chrX 54566597 54566597 1 + C A LIHC 54566593 + 54566573 54566613 41 AAAGCAAAATGGGAAGAAAGCAACCTCCAAAGTGCCCTCTG AAAGCAAAATGGGAAGAAAGCAACATCCAAAGTGCCCTCTG < 41bp 0.306213401128817 0.71648169045631 0.07210067 0.15759176 prediction 0.43296338091262 Functional Gain - GNL3L ENSG00000130119 CDS Human protein_coding chrX:54566593 chrX:54566597 synonymous SNV . 0 25 hm5C_associated_SNPs_121366 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:54566579-54566608
64251 chr8 56699290 56699290 1 + A G COAD 56699287 + 56699267 56699307 41 AGATACTTACACATCTAAAACAGAAGCTGATGACAAGAACG AGATACTTACACATCTAAAACAGGAGCTGATGACAAGAACG < 41bp 0.578561849970659 0.79503790081597 0.6949897 0.88410103 prediction 0.432952101690623 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699287 chr8:56699290 nonsynonymous SNV 0.459 1 24 hm5C_associated_SNPs_121370 0 0 2 RBM15 POSTAR2 ENCODE chr8:56699204-56699291
64251 chr10 5979117 5979117 1 + T C rs2274033 5979114 + 5979094 5979134 41 GGGGGCTACCTCTGCCACTCCTGTGCGGAGCAGCGCATCGG GGGGGCTACCTCTGCCACTCCTGCGCGGAGCAGCGCATCGG < 41bp 0.518876992815563 0.735350058852116 0.36864528 0.2329211 prediction 0.432946132073105 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5979114 chr10:5979117 synonymous SNV . 0 24 hm5C_associated_SNPs_121373 0 0 1 FMR1 POSTAR2 ENCODE chr10:5979092-5979136
64251 chr2 70031721 70031721 1 + C G LUAD 70031720 + 70031700 70031740 41 TACCGCAACACCGCCCAGCGCCAGGAGATCAGGACAGCCTA TACCGCAACACCGCCCAGCGCGAGGAGATCAGGACAGCCTA < 41bp 0.605008303564581 0.821480763406869 0.82838345 0.810603 prediction 0.432944919684575 Functional Gain - ANXA4 ENSG00000196975 CDS Human protein_coding chr2:70031720 chr2:70031721 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_121374 0 0 2 RPS3 POSTAR2 ENCODE chr2:70031678-70031745
64251 chr14 50360697 50360697 1 + C T SKCM 50360696 + 50360676 50360716 41 GCGGCATTACTACACTGGGACCCAAGGTCTCATCTTCGTAG GCGGCATTACTACACTGGGACTCAAGGTCTCATCTTCGTAG < 41bp 0.462990025336407 0.71647234915425 0.044896454 0.055667967 prediction 0.432944698308499 Functional Gain - ARF6 ENSG00000165527 CDS Human protein_coding chr14:50360696 chr14:50360697 synonymous SNV . 0 22 hm5C_associated_SNPs_121375 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr14:50360661-50360737
64251 chr2 25043676 25043676 1 - G A COAD 25043677 - 25043657 25043697 41 CTGGCTGGGGTCATCGGAGCCCGGAAACCACACTACGACAT CTGGCTGGGGTCATCGGAGCCTGGAAACCACACTACGACAT < 41bp 0.614040638119939 0.830506480232547 0.82581365 0.60933995 prediction 0.432931684225216 Functional Gain - ADCY3 ENSG00000138031 CDS Human protein_coding chr2:25043677 chr2:25043676 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_121377 0 0 1 DDX24 POSTAR2 ENCODE chr2:25043603-25043699
64251 chr1 36786081 36786081 1 + C A rs566926333 36786080 + 36786060 36786100 41 CCCCTGAAGAGGAGGCGCCCCCCAACGAGCAGAGGCCTCTG CCCCTGAAGAGGAGGCGCCCCACAACGAGCAGAGGCCTCTG < 41bp 0.447046250179788 0.716464777381485 0.056993276 0.070421696 prediction 0.43292955476297 Functional Gain - SH3D21 ENSG00000214193 CDS Human protein_coding chr1:36786080 chr1:36786081 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_121378 0 0 7 BUD13 POSTAR2 ENCODE chr1:36786042-36786104
64251 chr12 121134143 121134143 1 + C T COAD 121134142 + 121134122 121134162 41 TACCAAAGCTTCAGCCTCATCCGGGATTGGAGAAGAAAGAA TACCAAAGCTTCAGCCTCATCTGGGATTGGAGAAGAAAGAA < 41bp 0.478225967499954 0.716464269604695 0.7697934 0.34601986 prediction 0.43292853920939 Functional Gain - MLEC ENSG00000110917 CDS Human protein_coding chr12:121134142 chr12:121134143 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_121379 0 0 29 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:121134126-121134197
64251 chr3 131102152 131102152 1 + T C UCEC 131102149 + 131102129 131102169 41 TTGGGACTGCTGCAGTCTGGCTCTATTTCAGGCCTTAAGAT TTGGGACTGCTGCAGTCTGGCTCCATTTCAGGCCTTAAGAT < 41bp 0.496372033734063 0.716450376735961 0.12278691 0.17182845 prediction 0.432900753471922 Functional Gain - NUDT16 ENSG00000198585 CDS Human protein_coding chr3:131102149 chr3:131102152 synonymous SNV . 0 24 hm5C_associated_SNPs_121383 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:131102114-131102163
64251 chr11 65123732 65123732 1 + C T rs148668174 65123731 + 65123711 65123751 41 ATTCCCCCCTGAGCCACCTCCCCCGGGGCTCACATCCCAGG ATTCCCCCCTGAGCCACCTCCTCCGGGGCTCACATCCCAGG < 41bp 0.608894960282483 0.825344246219441 0.046903104 0.1209929 prediction 0.432898571873917 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123731 chr11:65123732 synonymous SNV . 0 22 hm5C_associated_SNPs_121385 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr11:65123732-65123733
64251 chr17 2282839 2282839 1 + T C rs62067023 2282837 + 2282817 2282857 41 TGGGGCCAGGAGGCAGCAGCCGTGCAGAGCCTGGGCTCCGG TGGGGCCAGGAGGCAGCAGCCGCGCAGAGCCTGGGCTCCGG < 41bp 0.474136126078259 0.716433474125443 0.6784073 0.6007832 prediction 0.432866948250885 Functional Gain - SGSM2 ENSG00000141258 UTR3 Human protein_coding chr17:2282837 chr17:2282839 . . 0 23 hm5C_associated_SNPs_121391 0 0 3 EIF3H POSTAR2 ENCODE chr17:2282818-2282856
64251 chr10 121212278 121212278 1 + C G LUAD 121212277 + 121212257 121212297 41 CACAGACGACGACTTCTACTCCAAGTTCTCCACGGGCTCTG CACAGACGACGACTTCTACTCGAAGTTCTCCACGGGCTCTG < 41bp 0.388147809112821 0.716426111801428 0.3013968 0.79490805 prediction 0.432852223602857 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121212277 chr10:121212278 synonymous SNV . 0 22 hm5C_associated_SNPs_121392 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:121212252-121212281
64251 chr1 16975438 16975438 1 + C G rs201921002 16975434 + 16975414 16975454 41 CGGCTGGATCAGCGTTGTTCCAAGCTGCGCGTGGCTGGGGG CGGCTGGATCAGCGTTGTTCCAAGGTGCGCGTGGCTGGGGG < 41bp 0.407322737200947 0.716421790453487 0.871305 0.9080318 prediction 0.432843580906975 Functional Gain - MST1P2 ENSG00000186301 ncRNA_exonic Human unprocessed_pseudogene chr1:16975434 chr1:16975438 . . 0 25 hm5C_associated_SNPs_121394 0 0 6 BUD13 POSTAR2 ENCODE chr1:16975402-16975465
64251 chr8 145584694 145584694 1 + C T rs34383175 145584693 + 145584673 145584713 41 TGAGCCTGGGCAGGTGGGGACCCCGCTCCCCAACACCTGTC TGAGCCTGGGCAGGTGGGGACTCCGCTCCCCAACACCTGTC < 41bp 0.513758515759842 0.730180208116051 0.3872046 0.6873374 prediction 0.432843384712419 Functional Gain - SLC52A2 ENSG00000185803 UTR3 Human protein_coding chr8:145584693 chr8:145584694 . . 0 22 hm5C_associated_SNPs_121396 1 1 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:145584633-145584739
64251 chr6 43416877 43416877 1 + C T SKCM 43416876 + 43416856 43416896 41 GGTGAGCTGGGTGAGGGGGGCCGGAGCTTATCTCTTGGGCA GGTGAGCTGGGTGAGGGGGGCTGGAGCTTATCTCTTGGGCA < 41bp 0.589105306331145 0.805524804188171 0.8482749 0.86461484 prediction 0.432838995714053 Functional Gain - ABCC10 ENSG00000124574 CDS Human protein_coding chr6:43416876 chr6:43416877 nonsynonymous SNV 0.784 3 22 hm5C_associated_SNPs_121398 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr6:43416853-43416879
64251 chrX 131206347 131206347 1 + C T SKCM 131206346 + 131206326 131206366 41 TCCTGAATGGAGCTTTACCACCGTACGAAAGAAGCCTGATC TCCTGAATGGAGCTTTACCACTGTACGAAAGAAGCCTGATC < 41bp 0.457372924036053 0.716418433250006 0.29029515 0.18901506 prediction 0.432836866500012 Functional Gain - STK26 ENSG00000134602 CDS Human protein_coding chrX:131206346 chrX:131206347 synonymous SNV . 0 22 hm5C_associated_SNPs_121399 0 0 4 DGCR8 POSTAR2 GSE39086,GSM955512 chrX:131206340-131206360
64251 chr19 42797278 42797278 1 + C T COAD 42797277 + 42797257 42797297 41 CCTCTGGAGCCTGGCCCAGTCCGAGAGCCAACTGCCCCAGA CCTCTGGAGCCTGGCCCAGTCTGAGAGCCAACTGCCCCAGA < 41bp 0.562001585906486 0.778414439592837 0.80154663 0.45175862 prediction 0.432825707372701 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42797277 chr19:42797278 stopgain 0.822 0 22 hm5C_associated_SNPs_121402 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42797276-42797314
64251 chrX 40996215 40996215 1 + A G STAD 40996212 + 40996192 40996232 41 CGTCCATGTGAATCAGTTTCCTCAAGTGTTCAGTTGCCTGA CGTCCATGTGAATCAGTTTCCTCGAGTGTTCAGTTGCCTGA < 41bp 0.499337321330132 0.716409887511207 0.056681514 0.13023049 prediction 0.432819775022413 Functional Gain - USP9X ENSG00000124486 CDS Human protein_coding chrX:40996212 chrX:40996215 synonymous SNV . 0 24 hm5C_associated_SNPs_121405 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:40996191-40996269
64251 chr3 87302930 87302930 1 + T A LUSC 87302926 + 87302906 87302946 41 TACTTCAAAGGCTACAATCTCAGATGAAGAGATTGAACGGC TACTTCAAAGGCTACAATCTCAGAAGAAGAGATTGAACGGC < 41bp 0.648898187216177 0.865307431378864 0.88025784 0.87448454 prediction 0.432818488325372 Functional Gain - CHMP2B ENSG00000083937 CDS Human protein_coding chr3:87302926 chr3:87302930 nonsynonymous SNV 0.998 5 25 hm5C_associated_SNPs_121406 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr3:87302920-87302960
64251 chr5 145428761 145428761 1 + C T UCEC 145428760 + 145428740 145428780 41 CAGGGGCGTCTCCTTGGTCACCGGGCGAGTCGGCATCTTCC CAGGGGCGTCTCCTTGGTCACTGGGCGAGTCGGCATCTTCC < 41bp 0.473500594547054 0.716398260495485 0.9035983 0.89224505 prediction 0.432796520990971 Functional Gain - SH3RF2 ENSG00000156463 CDS Human protein_coding chr5:145428760 chr5:145428761 synonymous SNV . 0 22 hm5C_associated_SNPs_121411 0 0 1 PRPF8 POSTAR2 ENCODE chr5:145428750-145428889
64251 chr17 46000487 46000487 1 + C T COAD 46000486 + 46000466 46000506 41 AAGCACTCAGCTGCAATTCTCCGAAAAGAGCGTCCCCTGCC AAGCACTCAGCTGCAATTCTCTGAAAAGAGCGTCCCCTGCC < 41bp 0.616552540532212 0.832945145847389 0.49562776 0.28001344 prediction 0.432785210630354 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:46000486 chr17:46000487 stopgain 1.000 1 22 hm5C_associated_SNPs_121413 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr17:46000468-46000488
64251 chr22 39918168 39918168 1 + A G COAD 39918165 + 39918145 39918185 41 TGCTTACGTTGCCATGATCCCTCAGTGCATAAAGGAGGAAG TGCTTACGTTGCCATGATCCCTCGGTGCATAAAGGAGGAAG < 41bp 0.587797145745368 0.804188950572546 0.029559255 0.13247812 prediction 0.432783609654355 Functional Gain - ATF4 ENSG00000128272 CDS Human protein_coding chr22:39918165 chr22:39918168 nonsynonymous SNV 0.670 0 24 hm5C_associated_SNPs_121415 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:39918000-39918173
64251 chr15 81295579 81295579 1 + A G LUAD 81295576 + 81295556 81295596 41 GGGGCGCCAAGATGTCGGACCACAGGGAGAGGCTGAGGAAC GGGGCGCCAAGATGTCGGACCACGGGGAGAGGCTGAGGAAC < 41bp 0.578563865478903 0.794949957884776 0.6953682 0.88407326 prediction 0.432772184811745 Functional Gain - TLNRD1 ENSG00000140406 CDS Human protein_coding chr15:81295576 chr15:81295579 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_121420 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:81295560-81295580
64251 chr14 103593025 103593025 1 + C A rs200076847 103593024 + 103593004 103593044 41 GGGGCTGGATGGCCCGCCCCCCACAGGTGCTCTAGGACCCT GGGGCTGGATGGCCCGCCCCCAACAGGTGCTCTAGGACCCT < 41bp 0.468764017364134 0.716384277813957 0.17494255 0.33136836 prediction 0.432768555627914 Functional Gain - TNFAIP2 ENSG00000185215 CDS Human protein_coding chr14:103593024 chr14:103593025 synonymous SNV . 0 22 hm5C_associated_SNPs_121421 0 0 1 FMR1 POSTAR2 ENCODE chr14:103592985-103593031
64251 chr10 112335111 112335111 1 + A G UCEC 112335108 + 112335088 112335128 41 TTCCAGCAATTCAGTTTGTTCTCAGTGATGAGTTTAGTCAT TTCCAGCAATTCAGTTTGTTCTCGGTGATGAGTTTAGTCAT < 41bp 0.485829980293442 0.716378356328616 0.08723158 0.1611214 prediction 0.432756712657232 Functional Gain - SMC3 ENSG00000108055 CDS Human protein_coding chr10:112335108 chr10:112335111 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_121423 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:112335103-112335126
64251 chr3 45677682 45677682 1 + C G rs548705746 45677678 + 45677658 45677698 41 CAGCAAAGGGGTGTTTGGGGCTGGCCAGGCCTGTCAGGCCA CAGCAAAGGGGTGTTTGGGGCTGGGCAGGCCTGTCAGGCCA < 41bp 0.429641368111611 0.716374928463432 0.22893932 0.33754593 prediction 0.432749856926863 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45677678 chr3:45677682 synonymous SNV . 0 25 hm5C_associated_SNPs_121426 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:45677652-45677685
64251 chr9 38396528 38396528 1 + C T rs150776963 38396527 + 38396507 38396547 41 TGTTGACAAAGTTGCCTTCACCGGTTCCACCGAGGTGGGCC TGTTGACAAAGTTGCCTTCACTGGTTCCACCGAGGTGGGCC < 41bp 0.5681260156638 0.784498781618439 0.22683176 0.20667171 prediction 0.432745531909277 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38396527 chr9:38396528 synonymous SNV . 0 22 hm5C_associated_SNPs_121428 1 0 2 RBM15 POSTAR2 ENCODE chr9:38396516-38396559
64251 chr6 161139414 161139414 1 + C T STAD 161139413 + 161139393 161139433 41 GAATGTGGCTGTTACCGTGTCCGGGCACACCTGTCAGCACT GAATGTGGCTGTTACCGTGTCTGGGCACACCTGTCAGCACT < 41bp 0.584876551375126 0.801244232220754 0.4431611 0.2987445 prediction 0.432735361691256 Functional Gain - PLG ENSG00000122194 CDS Human protein_coding chr6:161139413 chr6:161139414 synonymous SNV . 0 22 hm5C_associated_SNPs_121430 0 0 1 FASTKD2 POSTAR2 ENCODE chr6:161139325-161139429
64251 chr16 1877377 1877377 1 + C T rs73488045 1877376 + 1877356 1877396 41 CGTGCTGTTCCTGAAGCCGTCCACGGCCTACGCGCCCGAGG CGTGCTGTTCCTGAAGCCGTCTACGGCCTACGCGCCCGAGG < 41bp 0.54343392563585 0.759796885352096 0.09519005 0.16734731 prediction 0.432725919432492 Functional Gain - FAHD1 ENSG00000180185 CDS Human protein_coding chr16:1877376 chr16:1877377 synonymous SNV . 0 22 hm5C_associated_SNPs_121432 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1877360-1877380
64251 chr2 242758288 242758288 1 + C A LUSC 242758284 + 242758264 242758304 41 GAGATTTCCTTTTGTACATTCTCCCTGCGTGAGGTCCTGGA GAGATTTCCTTTTGTACATTCTCCATGCGTGAGGTCCTGGA < 41bp 0.288664255138716 0.716362778037053 0.211346 0.96773064 prediction 0.432725556074107 Functional Gain - NEU4 ENSG00000204099 CDS Human protein_coding chr2:242758284 chr2:242758288 nonsynonymous SNV 0.125 4 25 hm5C_associated_SNPs_121433 0 0 1 DDX55 POSTAR2 ENCODE chr2:242758281-242758381
64251 chr17 80680718 80680718 1 + C T HNSC 80680717 + 80680697 80680737 41 GAGGAACGGCCCTTTGTGGCCCGGTTTGGATTTGACGTGGT GAGGAACGGCCCTTTGTGGCCTGGTTTGGATTTGACGTGGT < 41bp 0.586484582339863 0.802835572938254 0.22239053 0.1886889 prediction 0.432701981196782 Functional Gain - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80680717 chr17:80680718 nonsynonymous SNV 0.373 3 22 hm5C_associated_SNPs_121436 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:80680700-80680736
64251 chr10 99969347 99969347 1 + T C STAD 99969344 + 99969324 99969364 41 ACTTTTTTGGACTCTGAACTCAGTATGTTAAATGGGACAAA ACTTTTTTGGACTCTGAACTCAGCATGTTAAATGGGACAAA < 41bp 0.518642014143188 0.734992648014163 0.29979527 0.41448227 prediction 0.43270126774195 Functional Gain - R3HCC1L ENSG00000166024 CDS Human protein_coding chr10:99969344 chr10:99969347 synonymous SNV . 0 24 hm5C_associated_SNPs_121437 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:99969315-99969362
64251 chr16 56904079 56904079 1 + T G COAD 56904075 + 56904055 56904095 41 GGCTCCATCGGCCTCATTTTCGCTTTCGCCAATGCCGTGGG GGCTCCATCGGCCTCATTTTCGCTGTCGCCAATGCCGTGGG < 41bp 0.509539279307704 0.725889437316674 0.2320264 0.24699366 prediction 0.43270031601794 Functional Gain - SLC12A3 ENSG00000070915 CDS Human protein_coding chr16:56904075 chr16:56904079 nonsynonymous SNV 0.310 4 25 hm5C_associated_SNPs_121438 0 0 1 GRWD1 POSTAR2 ENCODE chr16:56904065-56904148
64251 chr16 3536629 3536629 1 + C G rs138229523 3536625 + 3536605 3536645 41 GGCAGGAGGGCCGCGCCATGCTGACTGCTTGAACCTCTGCT GGCAGGAGGGCCGCGCCATGCTGAGTGCTTGAACCTCTGCT < 41bp 0.621477465769243 0.837819060238592 0.17699611 0.3764851 prediction 0.432683188938699 Functional Gain - NAA60 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3536625 chr16:3536629 . . 0 25 hm5C_associated_SNPs_121439 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:3536620-3536640
64251 chr16 2111888 2111888 1 + A G UCEC 2111885 + 2111865 2111905 41 ACTGCAGACCTTGGACAGCCCGGAGCTCAGGACCATCGTCC ACTGCAGACCTTGGACAGCCCGGGGCTCAGGACCATCGTCC < 41bp 0.566917624954767 0.783250379268668 0.81380856 0.88946176 prediction 0.432665508627802 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2111885 chr16:2111888 nonsynonymous SNV 0.418 4 24 hm5C_associated_SNPs_121443 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:2111852-2111904
64251 chr19 39959750 39959750 1 + A G PRAD 39959747 + 39959727 39959767 41 GGGTGTGAAGCCAACACTCTCTGAGCTGGAAAAGTTTGAGG GGGTGTGAAGCCAACACTCTCTGGGCTGGAAAAGTTTGAGG < 41bp 0.577890245232407 0.794222413707377 0.07316816 0.21048519 prediction 0.43266433694994 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39959747 chr19:39959750 nonsynonymous SNV 0.829 4 24 hm5C_associated_SNPs_121444 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:39959706-39959762
64251 chr5 896848 896848 1 + T G SKCM 896845 + 896825 896865 41 CTGAATGAAGATGGCCCCAGCAGTGAAAATCTGGAGGAAGA CTGAATGAAGATGGCCCCAGCAGGGAAAATCTGGAGGAAGA < 41bp 0.312385692712258 0.716319775755654 0.74587333 0.881781 prediction 0.432639551511309 Functional Gain - TRIP13 ENSG00000071539 CDS Human protein_coding chr5:896845 chr5:896848 nonsynonymous SNV 0.881 1 24 hm5C_associated_SNPs_121448 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:896838-896862
64251 chr8 141525387 141525387 1 + T C rs2231525 141525385 + 141525365 141525405 41 ACCAGCCTGGCGAGGACAGCCCTGGACCCACTCCACTGTCT ACCAGCCTGGCGAGGACAGCCCCGGACCCACTCCACTGTCT < 41bp 0.570138621167128 0.786456429903653 0.01839304 0.022008628 prediction 0.432635617473052 Functional Gain - CHRAC1 ENSG00000104472 UTR3 Human protein_coding chr8:141525385 chr8:141525387 . . 0 23 hm5C_associated_SNPs_121450 0 0 11 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:141525356-141525401
64251 chr9 139840215 139840215 1 + C T UCEC 139840214 + 139840194 139840234 41 GCCATGGCTGTCAGTACCTTCCGAAAGCTGTGAGTCCCAGA GCCATGGCTGTCAGTACCTTCTGAAAGCTGTGAGTCCCAGA < 41bp 0.472410090054688 0.716314548614249 0.33291104 0.22235739 prediction 0.432629097228498 Functional Gain - C8G ENSG00000176919 CDS Human protein_coding chr9:139840214 chr9:139840215 stopgain 0.505 0 22 hm5C_associated_SNPs_121451 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:139840205-139840231
64251 chr5 132425373 132425373 1 + C T STAD 132425372 + 132425352 132425392 41 CTCCTCAGGATTTGCCCTATCCAGATCCTGCTATAGGTAAG CTCCTCAGGATTTGCCCTATCTAGATCCTGCTATAGGTAAG < 41bp 0.601947066199825 0.818260944098474 0.33691353 0.08528006 prediction 0.432627755797298 Functional Gain - HSPA4 ENSG00000170606 CDS Human protein_coding chr5:132425372 chr5:132425373 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_121452 0 0 9 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr5:132425339-132425381
64251 chr3 172025174 172025174 1 + C G BLCA 172025173 + 172025153 172025193 41 GGTGTATGCCATGTACAATTCCGTAAAGGGATCCTGCTCCG GGTGTATGCCATGTACAATTCGGTAAAGGGATCCTGCTCCG < 41bp 0.406894129747198 0.716312696032728 0.10350031 0.16968822 prediction 0.432625392065456 Functional Gain - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:172025173 chr3:172025174 synonymous SNV . 0 22 hm5C_associated_SNPs_121453 0 0 6 DDX24 POSTAR2 ENCODE chr3:172025152-172025232
64251 chr5 139622979 139622979 1 + T C MESO 139622976 + 139622956 139622996 41 CGGCTCTCTGTTGCTGCTGTCTCTGGGACATGCTCACCTGA CGGCTCTCTGTTGCTGCTGTCTCCGGGACATGCTCACCTGA < 41bp 0.496722530176857 0.716301678591609 0.17079005 0.23852798 prediction 0.432603357183218 Functional Gain - CYSTM1 ENSG00000120306 CDS Human protein_coding chr5:139622976 chr5:139622979 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_121455 0 0 9 UPF1 POSTAR2 GSE69586,GSM1704214 chr5:139622960-139622980
64251 chr19 11472161 11472161 1 + A G UCEC 11472158 + 11472138 11472178 41 TGCGCCTACGCGGTCACCTACACAGCGGTGAGCTTCGGGAG TGCGCCTACGCGGTCACCTACACGGCGGTGAGCTTCGGGAG < 41bp 0.597676899200658 0.81397267300664 0.42798322 0.8530767 prediction 0.432591547611965 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11472158 chr19:11472161 synonymous SNV . 0 24 hm5C_associated_SNPs_121456 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:11472126-11472162
64251 chr20 2636061 2636061 1 + A G BRCA 2636058 + 2636038 2636078 41 CTTGCCCAGTTTATTGGAAACCGAAGGGAACTGAATGAGGA CTTGCCCAGTTTATTGGAAACCGGAGGGAACTGAATGAGGA < 41bp 0.541154149024748 0.757447737556948 0.25480166 0.8610172 prediction 0.4325871770644 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2636058 chr20:2636061 synonymous SNV . 0 24 hm5C_associated_SNPs_121459 0 0 38 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:2635980-2636143
64251 chr11 36250770 36250770 1 + A G STAD 36250767 + 36250747 36250787 41 TCTGACACGGAATCTCTGAACCAAGCCGACCTGCCCCCCTA TCTGACACGGAATCTCTGAACCAGGCCGACCTGCCCCCCTA < 41bp 0.474665667513665 0.716291609460719 0.32527846 0.91433793 prediction 0.432583218921438 Functional Gain - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36250767 chr11:36250770 synonymous SNV . 0 24 hm5C_associated_SNPs_121460 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:36250756-36250795
64251 chr17 42268131 42268131 1 + C T UCEC 42268130 + 42268110 42268150 41 TTGGGTGTGGTCTGGTACTTCCGAATCAATTACCGCCAATT TTGGGTGTGGTCTGGTACTTCTGAATCAATTACCGCCAATT < 41bp 0.571182759529151 0.787470814126378 0.5019497 0.46814463 prediction 0.432576109194453 Functional Gain - TMUB2 ENSG00000168591 CDS Human protein_coding chr17:42268130 chr17:42268131 stopgain 1.000 1 22 hm5C_associated_SNPs_121463 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr17:42268101-42268132
64251 chr11 64129153 64129153 1 + C A HNSC 64129149 + 64129129 64129169 41 AGCCTGGGCATCTTGCTCTTCGAGCTGCTGACGGGGGCCTC AGCCTGGGCATCTTGCTCTTCGAGATGCTGACGGGGGCCTC < 41bp 0.719707746068253 0.93598829998085 0.34861708 0.71277124 prediction 0.432561107825195 Functional Gain - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64129149 chr11:64129153 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_121468 0 0 7 BUD13 POSTAR2 ENCODE chr11:64129143-64129185
64251 chr12 42839842 42839842 1 + C T rs186308218 42839841 + 42839821 42839861 41 GGCTAGGACCCAACCAAGTACCAGAAATGAAGGAAACGACC GGCTAGGACCCAACCAAGTACTAGAAATGAAGGAAACGACC < 41bp 0.514349983743193 0.730625331374294 0.17937672 0.8969629 prediction 0.432550695262202 Functional Gain - PPHLN1 ENSG00000134283 CDS Human protein_coding chr12:42839841 chr12:42839842 nonsynonymous SNV 0.058 1 22 hm5C_associated_SNPs_121471 0 0 1 GRWD1 POSTAR2 ENCODE chr12:42839837-42839957
64251 chr6 19837831 19837831 1 + C G rs545268186 19837830 + 19837810 19837850 41 GTAAAACCCAGAGCGACCCTCCCGTCAATTGTTGGGCTCGG GTAAAACCCAGAGCGACCCTCGCGTCAATTGTTGGGCTCGG < 41bp 0.441620994555038 0.716253043325229 0.14903513 0.33937696 prediction 0.432506086650459 Functional Gain - ID4 ENSG00000226786 ncRNA_intronic Human other chr6:19837830 chr6:19837831 . . 0 22 hm5C_associated_SNPs_121478 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:19837798-19837834
64251 chr7 50467751 50467751 1 + C T HNSC 50467750 + 50467730 50467770 41 TGGGGGCCGAGTCCCTGCGCCCGCTGGTGCAGACGCCCCCG TGGGGGCCGAGTCCCTGCGCCTGCTGGTGCAGACGCCCCCG < 41bp 0.501387530958724 0.717639591986221 0.22271684 0.28525904 prediction 0.432504122054994 Functional Gain - IKZF1 ENSG00000185811 CDS Human protein_coding chr7:50467750 chr7:50467751 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_121479 0 0 2 FXR2 POSTAR2 ENCODE chr7:50467714-50467777
64251 chr17 65714118 65714118 1 + C A SKCM 65714114 + 65714094 65714134 41 TCTTCGGTAGTCCTGAGCGCCGGGCCTGAAGGACTCCTAGG TCTTCGGTAGTCCTGAGCGCCGGGACTGAAGGACTCCTAGG < 41bp 0.708426746275944 0.924677479608913 0.73709494 0.8358849 prediction 0.432501466665938 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65714114 chr17:65714118 nonsynonymous SNV 0.006 1 25 hm5C_associated_SNPs_121480 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65714060-65714120
64251 chr9 128678140 128678140 1 + A G STAD 128678137 + 128678117 128678157 41 TCAGATAACTCTATTGAACACTCAGATTACAGAGCCAAATT TCAGATAACTCTATTGAACACTCGGATTACAGAGCCAAATT < 41bp 0.536793435554325 0.753042452994239 0.07916203 0.10047409 prediction 0.432498034879827 Functional Gain - PBX3 ENSG00000167081 CDS Human protein_coding chr9:128678137 chr9:128678140 synonymous SNV . 0 24 hm5C_associated_SNPs_121481 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:128678135-128678162
64251 chr12 2912464 2912464 1 + C T rs373364321 2912463 + 2912443 2912483 41 ACTCCTGCGGCTGCCTGCCCCCCAGTCTCCCCACTCCACCC ACTCCTGCGGCTGCCTGCCCCTCAGTCTCCCCACTCCACCC < 41bp 0.481844163030721 0.716236889902977 0.009500414 0.014036626 prediction 0.432473779805955 Functional Gain - ITFG2-AS1 ENSG00000258092;ENSG00000258325 ncRNA_intronic Human other chr12:2912463 chr12:2912464 . . 0 22 hm5C_associated_SNPs_121484 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:2912414-2912485
64251 chr7 141464890 141464890 1 + A G LUSC 141464887 + 141464867 141464907 41 TGGTCATCTGAAGCCTGGATCCAAGGGACCCATTTTCTCTT TGGTCATCTGAAGCCTGGATCCAGGGGACCCATTTTCTCTT < 41bp 0.473493598789369 0.71623142957509 0.73558307 0.90544415 prediction 0.432462859150179 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464887 chr7:141464890 nonsynonymous SNV 0.063 2 24 hm5C_associated_SNPs_121488 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:141464810-141464922
64251 chr5 149212461 149212461 1 + C T STAD 149212460 + 149212440 149212480 41 AGCTCTGGGCAGGGCAGACCCCGGTGCCCCGGTTTCCCAGG AGCTCTGGGCAGGGCAGACCCTGGTGCCCCGGTTTCCCAGG < 41bp 0.553133998330253 0.769362033213994 0.81800413 0.37093163 prediction 0.432456069767482 Functional Gain - PPARGC1B ENSG00000155846 CDS Human protein_coding chr5:149212460 chr5:149212461 synonymous SNV . 0 22 hm5C_associated_SNPs_121491 0 0 2 BUD13 POSTAR2 ENCODE chr5:149212432-149212487
64251 chr21 45937658 45937658 1 + C T rs146120102 45937657 + 45937637 45937677 41 AACACTGAGCCCTCCTACCTCCTGATATCCAGGGCTGCCGA AACACTGAGCCCTCCTACCTCTTGATATCCAGGGCTGCCGA < 41bp 0.517328460015126 0.733554617485098 0.08760533 0.24188608 prediction 0.432452314939944 Functional Gain - TSPEAR-AS2 ENSG00000182912 UTR5 Human antisense chr21:45937657 chr21:45937658 . . 0 22 hm5C_associated_SNPs_121492 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:45937624-45937672
64251 chr2 128186242 128186242 1 + C T STAD 128186241 + 128186221 128186261 41 TCATCAAGATTCCCGTGGTCCCGCACAATGAGTGCAGCGAG TCATCAAGATTCCCGTGGTCCTGCACAATGAGTGCAGCGAG < 41bp 0.464865519888753 0.71622073452487 0.04511997 0.0561381 prediction 0.43244146904974 Functional Gain - PROC ENSG00000115718 CDS Human protein_coding chr2:128186241 chr2:128186242 nonsynonymous SNV 0.017 2 22 hm5C_associated_SNPs_121494 0 0 8 GRWD1 POSTAR2 ENCODE chr2:128186225-128186252
64251 chr2 189870168 189870168 1 + T A ESCA 189870164 + 189870144 189870184 41 TCCTGGTCTGGCTGGTACAGCTGGTGAACCTGGAAGAGATG TCCTGGTCTGGCTGGTACAGCTGGAGAACCTGGAAGAGATG < 41bp 0.389240458592106 0.716210732316083 0.784801 0.59207946 prediction 0.432421464632167 Functional Gain - COL3A1 ENSG00000168542 CDS Human protein_coding chr2:189870164 chr2:189870168 synonymous SNV . 0 25 hm5C_associated_SNPs_121500 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:189870158-189870183
64251 chr17 4443097 4443097 1 - G A UCEC 4443098 - 4443078 4443118 41 GGATGGCACACCTGCAGCCACCGGCGGGAGCCAGCCCCCCA GGATGGCACACCTGCAGCCACTGGCGGGAGCCAGCCCCCCA < 41bp 0.484899073664122 0.716207108880747 0.69430584 0.15819281 prediction 0.432414217761494 Functional Gain - MYBBP1A ENSG00000132382 CDS Human protein_coding chr17:4443098 chr17:4443097 synonymous SNV . 0 22 hm5C_associated_SNPs_121501 0 0 6 BUD13 POSTAR2 ENCODE chr17:4443079-4443174
64251 chr8 66557008 66557008 1 + C A rs151238942 66557004 + 66556984 66557024 41 GGAGCCGGAGAGGGTGCTGGCTGCCGCGCGGCCGAGGTGAG GGAGCCGGAGAGGGTGCTGGCTGCAGCGCGGCCGAGGTGAG < 41bp 0.687880675111685 0.904087524857867 0.08059326 0.2887256 prediction 0.432413699492364 Functional Gain - MTFR1 ENSG00000066855 UTR5 Human protein_coding chr8:66557004 chr8:66557008 . . 0 25 hm5C_associated_SNPs_121503 0 0 2 DDX3X POSTAR2 ENCODE chr8:66556980-66557020
64251 chr13 114188379 114188379 1 + C T COAD 114188378 + 114188358 114188398 41 AGCATTGTCGTGGAAGTTCTCCGAATCCTGGTTTTGATTGG AGCATTGTCGTGGAAGTTCTCTGAATCCTGGTTTTGATTGG < 41bp 0.591119180683023 0.807322954685782 0.8938838 0.36053932 prediction 0.432407548005517 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114188378 chr13:114188379 stopgain 0.008 1 22 hm5C_associated_SNPs_121505 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr13:114188360-114188388
64251 chr11 68707007 68707007 1 + T C UCEC 68707005 + 68706985 68707025 41 TCTTGTGTCCTCCCCAGATCCATGGCTGCGGTGAGAGGGCT TCTTGTGTCCTCCCCAGATCCACGGCTGCGGTGAGAGGGCT < 41bp 0.458773324948826 0.716200352509401 0.13090923 0.17906475 prediction 0.432400705018802 Functional Gain - IGHMBP2 ENSG00000132740 CDS Human protein_coding chr11:68707005 chr11:68707007 synonymous SNV . 0 23 hm5C_associated_SNPs_121508 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:68706969-68707007
64251 chr12 104682758 104682758 1 + C G SKCM 104682757 + 104682737 104682777 41 CTCGGAATTGGCCGCGGAAACCGATCTGCCCGTTGTGTTTG CTCGGAATTGGCCGCGGAAACGGATCTGCCCGTTGTGTTTG < 41bp 0.401783691632109 0.716196802784948 0.27474898 0.48031905 prediction 0.432393605569896 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104682757 chr12:104682758 synonymous SNV . 0 22 hm5C_associated_SNPs_121509 0 0 12 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr12:104682730-104682759
64251 chr12 113874657 113874657 1 + T C STAD 113874654 + 113874634 113874674 41 AGTGGTGGAGGACACCGAGGCTGTGAGCGCTGTGCAGCAGC AGTGGTGGAGGACACCGAGGCTGCGAGCGCTGTGCAGCAGC < 41bp 0.514959852898608 0.731156469712842 0.42471394 0.613221 prediction 0.432393233628468 Functional Gain - SDSL ENSG00000139410 CDS Human protein_coding chr12:113874654 chr12:113874657 nonsynonymous SNV 0.884 4 24 hm5C_associated_SNPs_121510 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:113874644-113874676
64251 chr3 41274906 41274906 1 + A G UCEC 41274903 + 41274883 41274923 41 TTCAGAACTGTCTTTGGACTCTCAGGAATCTTTCAGATGCT TTCAGAACTGTCTTTGGACTCTCGGGAATCTTTCAGATGCT < 41bp 0.541345174574933 0.757540307443676 0.066877395 0.17430282 prediction 0.432390265737485 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41274903 chr3:41274906 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_121511 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41274835-41274926
64251 chr2 170359664 170359664 1 + T G UCEC 170359661 + 170359641 170359681 41 CAAGATGATGTAGAAATAGACTCTGATGGTCACACGGATGC CAAGATGATGTAGAAATAGACTCGGATGGTCACACGGATGC < 41bp 0.426237290531521 0.716193519643238 0.15674746 0.32071492 prediction 0.432387039286475 Functional Gain - BBS5 ENSG00000163093;ENSG00000251569 CDS Human other chr2:170359661 chr2:170359664 synonymous SNV . 0 24 hm5C_associated_SNPs_121512 0 0 1 PRPF8 POSTAR2 ENCODE chr2:170359662-170359722
64251 chr12 51636162 51636162 1 + C A OV 51636158 + 51636138 51636178 41 AATGCTGCTCAGCTTGCAGTCATGCAGGGAGCCAACGTCCT AATGCTGCTCAGCTTGCAGTCATGAAGGGAGCCAACGTCCT < 41bp 0.318879572362396 0.716174810824472 0.28896156 0.42559034 prediction 0.432349621648945 Functional Gain - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51636158 chr12:51636162 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_121521 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:51636134-51636167
64251 chr12 51207887 51207887 1 + T C COAD 51207884 + 51207864 51207904 41 TTAACCATGACAAATTCAGGCAGTACTCAGCAAGGTACAAC TTAACCATGACAAATTCAGGCAGCACTCAGCAAGGTACAAC < 41bp 0.532870724722803 0.749045523366453 0.06478283 0.03556475 prediction 0.4323495972873 Functional Gain - ATF1 ENSG00000123268 CDS Human protein_coding chr12:51207884 chr12:51207887 synonymous SNV . 0 24 hm5C_associated_SNPs_121522 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:51207847-51207894
64251 chr10 88718498 88718498 1 + T C UCEC 88718496 + 88718476 88718516 41 TTCTCCATCGCCAAGGAGGGCGTGGTGGGTGCGGTGGAAAA TTCTCCATCGCCAAGGAGGGCGCGGTGGGTGCGGTGGAAAA < 41bp 0.57906379457529 0.795235303313286 0.7635472 0.8033955 prediction 0.432343017475993 Functional Gain - SNCG ENSG00000173267 CDS Human protein_coding chr10:88718496 chr10:88718498 nonsynonymous SNV 0.976 4 23 hm5C_associated_SNPs_121524 0 0 2 DDX3X POSTAR2 ENCODE chr10:88718471-88718500
64251 chr2 233322746 233322746 1 + C G rs147248868 233322745 + 233322725 233322765 41 GACACGAAATATGAGATCCACCGAGACCCCACACTGGACCC GACACGAAATATGAGATCCACGGAGACCCCACACTGGACCC < 41bp 0.387768732467844 0.71616921062412 0.11559838 0.47181815 prediction 0.43233842124824 Functional Gain - ALPI ENSG00000163295 CDS Human protein_coding chr2:233322745 chr2:233322746 nonsynonymous SNV 0.006 5 22 hm5C_associated_SNPs_121526 0 0 1 YTHDC2 POSTAR2 GSE98085,GSM2712720 chr2:233322739-233322760
64251 chr1 44173270 44173270 1 + C G rs555297258 44173269 + 44173249 44173289 41 TGTGGGCTCCCGCCGGGGTCCCCCGCGGCTGTCGCCGCCGC TGTGGGCTCCCGCCGGGGTCCGCCGCGGCTGTCGCCGCCGC < 41bp 0.584419036988439 0.800584948431826 0.30554447 0.37638658 prediction 0.432331822886773 Functional Gain - ST3GAL3 ENSG00000236200 ncRNA_intronic Human antisense chr1:44173269 chr1:44173270 . . 0 22 hm5C_associated_SNPs_121532 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:44173236-44173279
64251 chr2 96874626 96874626 1 + C A rs80229301 96874622 + 96874602 96874642 41 ACCTGGGCCGTGATTGGGCGCGACCTGGGCTCCTGGGTGCT ACCTGGGCCGTGATTGGGCGCGACATGGGCTCCTGGGTGCT < 41bp 0.331773443219082 0.716155445501327 0.19978139 0.3650906 prediction 0.432310891002654 Functional Gain - STARD7-AS1 ENSG00000204685 ncRNA_exonic Human processed_transcript chr2:96874622 chr2:96874626 . . 0 25 hm5C_associated_SNPs_121536 0 0 5 NONO POSTAR2 ENCODE chr2:96874599-96874680
64251 chrX 107147257 107147257 1 + A G LIHC 107147254 + 107147234 107147274 41 AGTTGGTAGAGATCATCCAGCAGAGGAAGCAAATGATCGCT AGTTGGTAGAGATCATCCAGCAGGGGAAGCAAATGATCGCT < 41bp 0.475054685755106 0.716147671721479 0.8790689 0.9078809 prediction 0.432295343442959 Functional Gain - MID2 ENSG00000080561 CDS Human protein_coding chrX:107147254 chrX:107147257 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_121537 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:107147253-107147278
64251 chr11 63986797 63986797 1 + C T HNSC 63986796 + 63986776 63986816 41 GCTGGAGGAGATTGACTGCACCGAGGAGGAGATGATGGTGT GCTGGAGGAGATTGACTGCACTGAGGAGGAGATGATGGTGT < 41bp 0.574157194042504 0.790300710192379 0.22843781 0.25889575 prediction 0.43228703229975 Functional Gain - FERMT3 ENSG00000149781 CDS Human protein_coding chr11:63986796 chr11:63986797 synonymous SNV . 0 22 hm5C_associated_SNPs_121540 0 0 2 DDX24 POSTAR2 ENCODE chr11:63986797-63986825
64251 chr2 190532125 190532125 1 + C T LAML 190532124 + 190532104 190532144 41 CTACAAGCTGTTAGCCCTTCCCGAATTTGGAATTTTGTTGA CTACAAGCTGTTAGCCCTTCCTGAATTTGGAATTTTGTTGA < 41bp 0.474522191498118 0.716143133803513 0.32393068 0.25220603 prediction 0.432286267607026 Functional Gain - ASNSD1 ENSG00000138381 CDS Human protein_coding chr2:190532124 chr2:190532125 stopgain 0.964 1 22 hm5C_associated_SNPs_121541 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:190532055-190532134
64251 chr7 150725594 150725594 1 + C G CESC 150725593 + 150725573 150725613 41 TGCCGGCGGCTCCTGTTTTACCGCGTCAGCATGCTGGTGCA TGCCGGCGGCTCCTGTTTTACGGCGTCAGCATGCTGGTGCA < 41bp 0.480003037740283 0.716142343701203 0.28258377 0.90988475 prediction 0.432284687402407 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150725593 chr7:150725594 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_121542 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:150725580-150725600
64251 chrX 47083802 47083802 1 + T C UCEC 47083800 + 47083780 47083820 41 CCAGAGATTGTGCACGAGGACTTGAAGATGGGGTCTGATGG CCAGAGATTGTGCACGAGGACTCGAAGATGGGGTCTGATGG < 41bp 0.64776890618265 0.863904801173349 0.027423173 0.1387035 prediction 0.432271789981397 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47083800 chrX:47083802 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_121546 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:47083782-47083803
64251 chr10 120877149 120877149 1 + C T HNSC 120877148 + 120877128 120877168 41 CTTAGTAAGGATTTTGATGCCCGAAAGGCCTACCTGGCTGG CTTAGTAAGGATTTTGATGCCTGAAAGGCCTACCTGGCTGG < 41bp 0.592672665312013 0.808808360509862 0.06917101 0.14510477 prediction 0.432271390395698 Functional Gain - FAM45A ENSG00000119979 CDS Human protein_coding chr10:120877148 chr10:120877149 stopgain 0.948 1 22 hm5C_associated_SNPs_121547 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:120877140-120877179
64251 chr12 132426425 132426425 1 + T C THYM 132426423 + 132426403 132426443 41 GAGCACATCTACCCCACCATCATCGGCACCGAGCGGGACGA GAGCACATCTACCCCACCATCACCGGCACCGAGCGGGACGA < 41bp 0.448230440911128 0.716126028805796 0.3910043 0.47066554 prediction 0.432252057611592 Functional Gain - PUS1 ENSG00000177192 CDS Human protein_coding chr12:132426423 chr12:132426425 nonsynonymous SNV 0.164 0 23 hm5C_associated_SNPs_121550 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:132426400-132426426
64251 chr20 61594048 61594048 1 + C T HNSC 61594047 + 61594027 61594067 41 GCAGAGCATCTTCTATTTCTCCGGCGGCCTCACCTTGCTTT GCAGAGCATCTTCTATTTCTCTGGCGGCCTCACCTTGCTTT < 41bp 0.576225833189844 0.792351341068175 0.87279105 0.40299737 prediction 0.432251015756661 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61594047 chr20:61594048 synonymous SNV . 0 22 hm5C_associated_SNPs_121551 0 0 7 GRWD1 POSTAR2 ENCODE chr20:61594031-61594099
64251 chr19 44039492 44039492 1 + C T rs149796259 44039491 + 44039471 44039511 41 TGCCCGAAGTCCTTTGGCCACCGCTCCAAGCTGGCGGCTCA TGCCCGAAGTCCTTTGGCCACTGCTCCAAGCTGGCGGCTCA < 41bp 0.487198572158392 0.7161236657613 0.51157963 0.16222468 prediction 0.4322473315226 Functional Gain - ZNF575 ENSG00000176472 CDS Human protein_coding chr19:44039491 chr19:44039492 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121553 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:44039481-44039517
64251 chr10 114903766 114903766 1 + T G STAD 114903763 + 114903743 114903783 41 CGTAGGACAAATCCCCCATCCGCTAGGATGGTTAGTACCAC CGTAGGACAAATCCCCCATCCGCGAGGATGGTTAGTACCAC < 41bp 0.546257577302673 0.762376624968384 0.31282586 0.3902043 prediction 0.432238095331422 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114903763 chr10:114903766 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_121558 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:114903751-114903774
64251 chr14 77930948 77930948 1 + C T SARC 77930947 + 77930927 77930967 41 TTTTATCTTTTCAGAGTTCACCCAGGGCATGATCTTACCTA TTTTATCTTTTCAGAGTTCACTCAGGGCATGATCTTACCTA < 41bp 0.462451994728802 0.716097372275818 0.041309386 0.028727084 prediction 0.432194744551637 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77930947 chr14:77930948 synonymous SNV . 0 22 hm5C_associated_SNPs_121568 0 0 12 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:77930940-77930976
64251 chr19 10224596 10224596 1 + C T OV 10224595 + 10224575 10224615 41 CGCTATGGGGAGGCCGCGTGCCGCCTGGAGCGCTTCCTCTT CGCTATGGGGAGGCCGCGTGCTGCCTGGAGCGCTTCCTCTT < 41bp 0.547121668640479 0.763193323693809 0.22614121 0.20294636 prediction 0.432143310106661 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224595 chr19:10224596 nonsynonymous SNV 0.053 3 22 hm5C_associated_SNPs_121577 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:10224592-10224653
64251 chr4 159092398 159092398 1 - A C UCEC 159092400 - 159092380 159092420 41 AAACCTTCTGCTGGGCACTGCGTGTGCCATCTACTTGGGCT AAACCTTCTGCTGGGCACTGCGGGTGCCATCTACTTGGGCT < 41bp 0.346037486831778 0.716069687220858 0.35018426 0.87476695 prediction 0.432139374441717 Functional Gain - FAM198B ENSG00000164125 CDS Human protein_coding chr4:159092400 chr4:159092398 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_121578 0 0 3 DDX3X POSTAR2 ENCODE chr4:159092317-159092412
64251 chr13 49719939 49719939 1 + T C COAD 49719936 + 49719916 49719956 41 CTCCGACATCCAGGCAAGGACAGTAGTACTTACCTGGTCAC CTCCGACATCCAGGCAAGGACAGCAGTACTTACCTGGTCAC < 41bp 0.515211999303974 0.731280146858294 0.25551137 0.30942154 prediction 0.43213629510864 Functional Gain - FNDC3A ENSG00000102531 CDS Human protein_coding chr13:49719936 chr13:49719939 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_121579 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr13:49719926-49719964
64251 chr15 99791740 99791740 1 + C A rs565921036 99791736 + 99791716 99791756 41 GCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAG GCTCCGGAGCGCTGGCTCTGCTGGAGCTGAGGTGAGTAGAG < 41bp 0.676618587177445 0.892686262646966 0.4561431 0.34385106 prediction 0.432135350939042 Functional Gain - LRRC28 ENSG00000168904 UTR5 Human protein_coding chr15:99791736 chr15:99791740 . . 0 25 hm5C_associated_SNPs_121581 0 0 1 DDX3X POSTAR2 ENCODE chr15:99791701-99791747
64251 chr11 554256 554256 1 + C T CESC 554255 + 554235 554275 41 AGGGCAGCTGAACTCTCTCACCCCAGCCCCGTCCCCACTTA AGGGCAGCTGAACTCTCTCACTCCAGCCCCGTCCCCACTTA < 41bp 0.595967288878645 0.812028496092465 0.107608676 0.9415257 prediction 0.432122414427639 Functional Gain - LRRC56 ENSG00000161328 CDS Human protein_coding chr11:554255 chr11:554256 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_121584 0 0 1 CSTF2T POSTAR2 ENCODE chr11:554240-554314
64251 chr8 37964588 37964588 1 + T C UCEC 37964586 + 37964566 37964606 41 ATGGATACTCAGGCGGGCTCCGTGGATGAAGAGAATGGCCG ATGGATACTCAGGCGGGCTCCGCGGATGAAGAGAATGGCCG < 41bp 0.622096120398316 0.838151450884562 0.90739197 0.9110691 prediction 0.432110660972491 Functional Gain - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37964586 chr8:37964588 nonsynonymous SNV 0.997 1 23 hm5C_associated_SNPs_121588 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr8:37964563-37964610
64251 chr2 85769043 85769043 1 + A G TGCT 85769040 + 85769020 85769060 41 CAAGCTAAATGCCAAACTGGCAGAACTACGCCGTAATGGCA CAAGCTAAATGCCAAACTGGCAGGACTACGCCGTAATGGCA < 41bp 0.477093890458306 0.716054302339484 0.64916164 0.9257817 prediction 0.432108604678969 Functional Gain - MAT2A ENSG00000168906 CDS Human protein_coding chr2:85769040 chr2:85769043 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_121591 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:85768932-85769236
64251 chr19 16339738 16339738 1 + C T LUSC 16339737 + 16339717 16339757 41 TGTGGTCCATCAAGTCCTTCCCGGTGAGCACTCTGTCCAGA TGTGGTCCATCAAGTCCTTCCTGGTGAGCACTCTGTCCAGA < 41bp 0.471896802329891 0.716054037151001 0.25686014 0.20864818 prediction 0.432108074302003 Functional Gain - AP1M1 ENSG00000072958 CDS Human protein_coding chr19:16339737 chr19:16339738 nonsynonymous SNV 0.964 4 22 hm5C_associated_SNPs_121592 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:16339726-16339764
64251 chr11 86017450 86017450 1 + C A UCEC 86017449 + 86017429 86017469 41 ATCCTGATTCAAATGGAATGCCAGTATGGCAACTCCTAGGA ATCCTGATTCAAATGGAATGCAAGTATGGCAACTCCTAGGA < 41bp 0.464382643392337 0.716046398668442 0.14548028 0.13133189 prediction 0.432092797336884 Functional Gain - HIKESHI ENSG00000149196 CDS Human protein_coding chr11:86017449 chr11:86017450 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_121594 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:86017438-86017468
64251 chr5 71482512 71482512 1 + C A UCEC 71482511 + 71482491 71482531 41 CGGGCAGTGCTTTGAAAATACCGGAGAGCTCATTCTCCAGT CGGGCAGTGCTTTGAAAATACAGGAGAGCTCATTCTCCAGT < 41bp 0.609980917557405 0.8260200190772 0.8353423 0.7774763 prediction 0.43207820303959 Functional Gain - MAP1B ENSG00000131711 CDS Human protein_coding chr5:71482511 chr5:71482512 synonymous SNV . 0 22 hm5C_associated_SNPs_121599 0 0 13 FMR1 POSTAR2 GSE39682,GSM977615 chr5:71482443-71482574
64251 chr16 3119375 3119375 1 + T G rs185335398 3119372 + 3119352 3119392 41 AATGAAGATACTGACACCACCTTTGCCCTCCCCGTCACCGC AATGAAGATACTGACACCACCTTGGCCCTCCCCGTCACCGC < 41bp 0.343639729016547 0.71603574071765 0.014865547 0.023486912 prediction 0.4320714814353 Functional Gain - IL32 ENSG00000008517 UTR3 Human protein_coding chr16:3119372 chr16:3119375 . . 0 24 hm5C_associated_SNPs_121600 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr16:3119360-3119385
64251 chr1 214504374 214504374 1 + A G PRAD 214504371 + 214504351 214504391 41 GAGACATGGTCAGATATGCACGCAACGTCATTGAAGAGTTC GAGACATGGTCAGATATGCACGCGACGTCATTGAAGAGTTC < 41bp 0.550602721132245 0.766632812530105 0.06301245 0.23961058 prediction 0.43206018279572 Functional Gain - SMYD2 ENSG00000143499 CDS Human protein_coding chr1:214504371 chr1:214504374 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_121603 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:214504358-214504390
64251 chr14 105965233 105965233 1 + C A UCEC 105965229 + 105965209 105965249 41 CAGTGTCGGCAGGAACTGGCCAGGCTGGTGGGAGCCCGCCC CAGTGTCGGCAGGAACTGGCCAGGATGGTGGGAGCCCGCCC < 41bp 0.711477081728055 0.927504927031449 0.7545231 0.711097 prediction 0.432055690606788 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105965229 chr14:105965233 nonsynonymous SNV 0.010 3 25 hm5C_associated_SNPs_121604 0 0 2 BUD13 POSTAR2 ENCODE chr14:105965177-105965262
64251 chr21 47918596 47918596 1 + C T SARC 47918595 + 47918575 47918615 41 AGCGTCGAGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTC AGCGTCGAGCCCTGGCTCGACTGGGTCATTCAGGGCTCGTC < 41bp 0.574963343638256 0.790990949716642 0.84305465 0.19916731 prediction 0.432055212156771 Functional Gain - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47918595 chr21:47918596 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_121605 0 0 1 DDX24 POSTAR2 ENCODE chr21:47918582-47918747
64251 chr4 142154959 142154959 1 + A G BRCA 142154956 + 142154936 142154976 41 TTATTGGAAGAACCTTTCATCTGATAAGTATGGTGATACCA TTATTGGAAGAACCTTTCATCTGGTAAGTATGGTGATACCA < 41bp 0.484829409205533 0.716027087912835 0.2402175 0.31333578 prediction 0.43205417582567 Functional Gain - ZNF330 ENSG00000109445 CDS Human protein_coding chr4:142154956 chr4:142154959 nonsynonymous SNV 0.374 1 24 hm5C_associated_SNPs_121606 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr4:142154931-142155069
64251 chr16 67927240 67927240 1 + C A rs35268848 67927239 + 67927219 67927259 41 CCCGGAGATGGCCGGCAGAGCCGCCGAGACGCCGAAGAGCC CCCGGAGATGGCCGGCAGAGCAGCCGAGACGCCGAAGAGCC < 41bp 0.537314643384652 0.75334055337354 0.5927314 0.7319551 prediction 0.432051819977775 Functional Gain - PSKH1 ENSG00000159792 UTR5 Human protein_coding chr16:67927239 chr16:67927240 . . 0 22 hm5C_associated_SNPs_121607 0 0 4 DDX3X POSTAR2 ENCODE chr16:67927197-67927309
64251 chr10 13658419 13658419 1 + A G UCEC 13658416 + 13658396 13658436 41 AGGCAAATGATGCTTATCTTCAGATGGCCATTGGAAATGCG AGGCAAATGATGCTTATCTTCAGGTGGCCATTGGAAATGCG < 41bp 0.561362502888108 0.777378021202376 0.43766642 0.627025 prediction 0.432031036628536 Functional Gain - PRPF18 ENSG00000165630;ENSG00000239665 CDS Human other chr10:13658416 chr10:13658419 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_121612 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:13658407-13658434
64251 chr3 67053756 67053756 1 + C G rs539885063 67053752 + 67053732 67053772 41 TTCTTACAGAGGCCAATGTTCAAGCCTTGTTCACTGCAGCT TTCTTACAGAGGCCAATGTTCAAGGCTTGTTCACTGCAGCT < 41bp 0.428227521080144 0.716012021701053 0.57613647 0.9197049 prediction 0.432024043402106 Functional Gain - KBTBD8 ENSG00000163376 CDS Human protein_coding chr3:67053752 chr3:67053756 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_121615 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:67053750-67053782
64251 chr3 10326768 10326768 1 + T C rs6809341 10326766 + 10326746 10326786 41 CCTGGTATCAGTAAGGGAACCATGGCGACGGCCAGCCTTGC CCTGGTATCAGTAAGGGAACCACGGCGACGGCCAGCCTTGC < 41bp 0.489779719853669 0.716011628311701 0.21223179 0.4123252 prediction 0.432023256623403 Functional Gain - LINC00852 ENSG00000231177 ncRNA_exonic Human antisense chr3:10326766 chr3:10326768 . . 0 23 hm5C_associated_SNPs_121616 0 0 1 HNRNPM POSTAR2 ENCODE chr3:10326700-10326784
64251 chr7 36492212 36492212 1 + C A rs2052197 36492211 + 36492191 36492231 41 ACCTATTGGAAAGCCTTAAACCGGGAAATTTCCATGCTATC ACCTATTGGAAAGCCTTAAACAGGGAAATTTCCATGCTATC < 41bp 0.605552763343018 0.821559895634846 0.9199343 0.9337454 prediction 0.432014264583656 Functional Gain - ANLN ENSG00000011426 UTR3 Human protein_coding chr7:36492211 chr7:36492212 . . 0 22 hm5C_associated_SNPs_121620 0 0 1 RPS3 POSTAR2 ENCODE chr7:36492154-36492249
64251 chr14 23946517 23946517 1 + C A UCEC 23946513 + 23946493 23946533 41 CTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTG CTCACAACTTCATTCCCTTACACAATTCAGTGACATCAGTG < 41bp 0.295017331526558 0.715984880463965 0.041755557 0.044169486 prediction 0.43196976092793 Functional Gain - NGDN ENSG00000129460 CDS Human protein_coding chr14:23946513 chr14:23946517 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_121627 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:23946479-23946521
64251 chr1 65877036 65877036 1 + T C OV 65877034 + 65877014 65877054 41 ACCAAGTGGAAACCAGTTGGCATGGCAGACCTGGTAACACC ACCAAGTGGAAACCAGTTGGCACGGCAGACCTGGTAACACC < 41bp 0.43476830333648 0.715981781025986 0.6094448 0.537956 prediction 0.431963562051971 Functional Gain - DNAJC6 ENSG00000116675 CDS Human protein_coding chr1:65877034 chr1:65877036 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_121628 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:65876992-65877038
64251 chr3 127981042 127981042 1 + C T SARC 127981041 + 127981021 127981061 41 AGGCCCCCGAAACTGAAGCTCCACAGGGCATTCCAGAGCTC AGGCCCCCGAAACTGAAGCTCTACAGGGCATTCCAGAGCTC < 41bp 0.452440870402499 0.715977474809774 0.28206256 0.9068519 prediction 0.431954949619548 Functional Gain - EEFSEC ENSG00000132394 CDS Human protein_coding chr3:127981041 chr3:127981042 nonsynonymous SNV 0.986 2 22 hm5C_associated_SNPs_121629 0 0 1 GRWD1 POSTAR2 ENCODE chr3:127980982-127981049
64251 chr1 179033214 179033214 1 + C T STAD 179033213 + 179033193 179033233 41 CACCCATGGGGCAGGACTTACCGAGAAGGCAAATTGGCCAG CACCCATGGGGCAGGACTTACTGAGAAGGCAAATTGGCCAG < 41bp 0.598572106526632 0.81454757752952 0.63297004 0.3360119 prediction 0.431950942005777 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179033213 chr1:179033214 stopgain 1.000 1 22 hm5C_associated_SNPs_121631 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:179033169-179033220
64251 chr11 34129797 34129797 1 + C T UCEC 34129796 + 34129776 34129816 41 CATCGGAAAAAGGTGGATAACCGAATCCGGATTCTCATTGA CATCGGAAAAAGGTGGATAACTGAATCCGGATTCTCATTGA < 41bp 0.583788241565371 0.799760765793858 0.28880012 0.1818189 prediction 0.431945048456974 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34129796 chr11:34129797 stopgain 0.997 1 22 hm5C_associated_SNPs_121635 0 0 4 GEMIN5 POSTAR2 ENCODE chr11:34129753-34129811
64251 chr19 30106891 30106891 1 + T C rs2115370 30106889 + 30106869 30106909 41 GGTTTATTCACTTCAGGAATCATAGCTGGGGTGGACCCCAG GGTTTATTCACTTCAGGAATCACAGCTGGGGTGGACCCCAG < 41bp 0.554219914643046 0.77018549034935 0.51557016 0.31110257 prediction 0.431931151412608 Functional Gain - POP4 ENSG00000105171 UTR3 Human protein_coding chr19:30106889 chr19:30106891 . . 0 23 hm5C_associated_SNPs_121639 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:30106874-30106898
64251 chr19 50188254 50188254 1 + T C STAD 50188252 + 50188232 50188272 41 AAGGAGCCCCTAGTGGATGTCGTGGACCCCAAACAGCTGGT AAGGAGCCCCTAGTGGATGTCGCGGACCCCAAACAGCTGGT < 41bp 0.632284396499396 0.848248689252353 0.53972596 0.73352355 prediction 0.431928585505914 Functional Gain - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50188252 chr19:50188254 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_121640 0 0 18 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:50188188-50188283
64251 chr7 100866977 100866977 1 + T C STAD 100866974 + 100866954 100866994 41 AACTTGAGTGTGGCCGAGGGCCCTAACTACCTGACGGCCTG AACTTGAGTGTGGCCGAGGGCCCCAACTACCTGACGGCCTG < 41bp 0.502996173996776 0.718957963314226 0.23695305 0.25717735 prediction 0.4319235786349 Functional Gain - ZNHIT1 ENSG00000106400 CDS Human protein_coding chr7:100866974 chr7:100866977 synonymous SNV . 0 24 hm5C_associated_SNPs_121643 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:100866953-100866986
64251 chr12 7047134 7047134 1 + C A UCEC 7047133 + 7047113 7047153 41 GGAGAAGGTGCGGCGCGAGGCCGAGCAGCGCGCGCGCGAAG GGAGAAGGTGCGGCGCGAGGCAGAGCAGCGCGCGCGCGAAG < 41bp 0.604897315972227 0.820855584786366 0.37832403 0.9006064 prediction 0.431916537628276 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7047133 chr12:7047134 synonymous SNV . 0 22 hm5C_associated_SNPs_121645 0 0 4 AARS POSTAR2 ENCODE chr12:7047088-7047144
64251 chr2 24406428 24406428 1 + C A CHOL 24406424 + 24406404 24406444 41 GGCCAGGCTGCATGCCAGCTCGCCCTACTTCACTTTCACTT GGCCAGGCTGCATGCCAGCTCGCCATACTTCACTTTCACTT < 41bp 0.295536713154449 0.715955220203643 0.032580703 0.24315917 prediction 0.431910440407287 Functional Gain - FAM228A ENSG00000186453 CDS Human protein_coding chr2:24406424 chr2:24406428 synonymous SNV . 0 25 hm5C_associated_SNPs_121646 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr2:24406425-24406451
64251 chr11 129321220 129321220 1 + C T LUSC 129321219 + 129321199 129321239 41 GAACCGAAAGCACGTGATGTCCCCTTAGAGATGGCAGAGCC GAACCGAAAGCACGTGATGTCTCCTTAGAGATGGCAGAGCC < 41bp 0.460327671473665 0.71595443422416 0.015433997 0.16198993 prediction 0.43190886844832 Functional Gain - BARX2 ENSG00000043039 CDS Human protein_coding chr11:129321219 chr11:129321220 nonsynonymous SNV 0.005 1 22 hm5C_associated_SNPs_121647 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:129321200-129321226
64251 chr11 45949527 45949527 1 + C T CESC 45949526 + 45949506 45949546 41 GCAAGGCAGCACTGGTGGTGCCGGCATTCGAGACCCTGCGC GCAAGGCAGCACTGGTGGTGCTGGCATTCGAGACCCTGCGC < 41bp 0.482069219346275 0.715951275365701 0.52178836 0.34369162 prediction 0.431902550731402 Functional Gain - LARGE2 ENSG00000165905 CDS Human protein_coding chr11:45949526 chr11:45949527 nonsynonymous SNV 0.946 4 22 hm5C_associated_SNPs_121648 0 0 1 PRPF8 POSTAR2 ENCODE chr11:45949480-45949531
64251 chr5 121311051 121311051 1 + A G rs61734324 121311048 + 121311028 121311068 41 GTTAAAAAACCAAAGACGGGCGCAAAGATTGCTTGAAGAAA GTTAAAAAACCAAAGACGGGCGCGAAGATTGCTTGAAGAAA < 41bp 0.556585247572682 0.772530512524341 0.012242019 0.020133436 prediction 0.431890529903318 Functional Gain - SRFBP1 ENSG00000151304 CDS Human protein_coding chr5:121311048 chr5:121311051 nonsynonymous SNV 0.865 3 24 hm5C_associated_SNPs_121651 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr5:121311042-121311065
64251 chr12 7083744 7083744 1 + A G STAD 7083741 + 7083721 7083761 41 TGATGCTGATGGATAGTCCCCTGAACCGAGCTGGCTTGCTA TGATGCTGATGGATAGTCCCCTGGACCGAGCTGGCTTGCTA < 41bp 0.537504886865825 0.753449000920327 0.18529287 0.43789017 prediction 0.431888228109005 Functional Gain - EMG1 ENSG00000126749 CDS Human protein_coding chr12:7083741 chr12:7083744 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_121652 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:7083711-7083761
64251 chr17 1946172 1946172 1 + C T SKCM 1946171 + 1946151 1946191 41 TCTTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTCAAG TCTTGGTGTCTGGTTTCTGTCTCCGGGGCATTGGGTTCAAG < 41bp 0.595864070062188 0.811806865745819 0.24181402 0.13788325 prediction 0.43188559136726 Functional Gain - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946171 chr17:1946172 nonsynonymous SNV 0.548 0 22 hm5C_associated_SNPs_121654 0 0 15 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:1946135-1946188
64251 chr15 66840912 66840912 1 + C T COAD 66840911 + 66840891 66840931 41 GACAGTGGGTACCACGATCTCCGTAACCATTTGCATGTGAC GACAGTGGGTACCACGATCTCTGTAACCATTTGCATGTGAC < 41bp 0.580187181653107 0.796124107652901 0.27234417 0.15804857 prediction 0.431873851999588 Functional Gain - LCTL ENSG00000188501 CDS Human protein_coding chr15:66840911 chr15:66840912 synonymous SNV . 0 22 hm5C_associated_SNPs_121658 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:66840843-66840980
64251 chr17 78086482 78086482 1 + C T SKCM 78086481 + 78086461 78086501 41 GACGGGGGACGTGTGGAGCTCCTGGGAGCAGCTCGCCTCCT GACGGGGGACGTGTGGAGCTCTTGGGAGCAGCTCGCCTCCT < 41bp 0.561528138078414 0.777461936035174 0.8282539 0.39344108 prediction 0.43186759591352 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78086481 chr17:78086482 synonymous SNV . 0 22 hm5C_associated_SNPs_121661 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:78086461-78086484
64251 chr19 49633718 49633718 1 + C T CESC 49633717 + 49633697 49633737 41 GGCCCTGGAGCGGCAGCGCGCCGAGGTGTGCCAGCTGCGGG GGCCCTGGAGCGGCAGCGCGCTGAGGTGTGCCAGCTGCGGG < 41bp 0.549699448883728 0.765630783803968 0.8912799 0.4009055 prediction 0.431862669840479 Functional Gain - PPFIA3 ENSG00000177380 CDS Human protein_coding chr19:49633717 chr19:49633718 synonymous SNV . 0 22 hm5C_associated_SNPs_121662 0 0 2 PPIG POSTAR2 ENCODE chr19:49633686-49633849
64251 chr17 48818559 48818559 1 + A G COAD 48818556 + 48818536 48818576 41 GCAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTCGTTT GCAGAAGTAGAACGTAGGATCAGGCGAGGCCATGCTCGTTT < 41bp 0.568199292580637 0.784128915440613 0.5890812 0.9070493 prediction 0.431859245719951 Functional Gain - LUC7L3 ENSG00000108848 CDS Human protein_coding chr17:48818556 chr17:48818559 synonymous SNV . 0 24 hm5C_associated_SNPs_121663 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:48818452-48818566
64251 chr16 29816330 29816330 1 + C T SKCM 29816329 + 29816309 29816349 41 ATCGTGGGCTGGCGGGAGCTCCACGGCCCCTTCAGCCAGGT ATCGTGGGCTGGCGGGAGCTCTACGGCCCCTTCAGCCAGGT < 41bp 0.597450978335988 0.81337777913513 0.8001789 0.817435 prediction 0.431853601598284 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29816329 chr16:29816330 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_121665 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29816305-29816333
64251 chr3 49569741 49569741 1 + C T LUAD 49569740 + 49569720 49569760 41 GATCCACGTCCACAGGCGCCCCCAAGGGGATAGGGCTCCTG GATCCACGTCCACAGGCGCCCTCAAGGGGATAGGGCTCCTG < 41bp 0.459262869421449 0.715923895505339 0.055356294 0.071067154 prediction 0.431847791010678 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569740 chr3:49569741 synonymous SNV . 0 22 hm5C_associated_SNPs_121666 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:49569720-49569745
64251 chr11 4142935 4142935 1 + A G UCEC 4142932 + 4142912 4142952 41 GGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCT GGAAAGGAAGAGCAGCGTGCCAGGGATCTTTTCTTTGCTCT < 41bp 0.479871455077233 0.715923723784859 0.7458017 0.8798717 prediction 0.431847447569718 Functional Gain - RRM1 ENSG00000167325 CDS Human protein_coding chr11:4142932 chr11:4142935 synonymous SNV . 0 24 hm5C_associated_SNPs_121667 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:4142923-4142948
64251 chr1 27676954 27676954 1 + C T HNSC 27676953 + 27676933 27676973 41 TGAAGAAACGGAATCTGAATCCGGTTTTCAACGAGACTCTC TGAAGAAACGGAATCTGAATCTGGTTTTCAACGAGACTCTC < 41bp 0.528358520197371 0.744282030087218 0.7970369 0.44796214 prediction 0.431847019779694 Functional Gain - SYTL1 ENSG00000142765 CDS Human protein_coding chr1:27676953 chr1:27676954 nonsynonymous SNV 0.965 5 22 hm5C_associated_SNPs_121668 0 0 1 PRPF8 POSTAR2 ENCODE chr1:27676947-27677042
64251 chr3 14183183 14183183 1 + T C UCEC 14183181 + 14183161 14183201 41 ACCTCGCTGACCCTGCTGACCGTGGCGGCTGGCTGGCTCTT ACCTCGCTGACCCTGCTGACCGCGGCGGCTGGCTGGCTCTT < 41bp 0.610268409208422 0.826182075414712 0.77850974 0.87899554 prediction 0.43182733241258 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14183181 chr3:14183183 nonsynonymous SNV 0.993 2 23 hm5C_associated_SNPs_121671 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:14183124-14183202
64251 chr8 56699094 56699094 1 + A G rs530784623 56699091 + 56699071 56699111 41 ATGGAGGAGGACTATTGTGGCAAAGTTGGCAAGAAAAACAT ATGGAGGAGGACTATTGTGGCAAGGTTGGCAAGAAAAACAT < 41bp 0.551757113352685 0.767662003095826 0.32332793 0.5736328 prediction 0.431809779486284 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699091 chr8:56699094 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_121676 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr8:56699094-56699095
64251 chr17 40717318 40717318 1 + C G BLCA 40717314 + 40717294 40717334 41 TGGCCCGAGAGGAGATGGATCGGGCTGTGGCTGAGGGTGAG TGGCCCGAGAGGAGATGGATCGGGGTGTGGCTGAGGGTGAG < 41bp 0.657555466202111 0.873460078883029 0.85883045 0.9092076 prediction 0.431809225361837 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40717314 chr17:40717318 nonsynonymous SNV 0.985 3 25 hm5C_associated_SNPs_121677 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr17:40717254-40717326
64251 chr22 45944543 45944543 1 + T C STAD 45944540 + 45944520 45944560 41 GGGGCCACATCTGCTCCTACCGCTGCATCAACATCCCTGGA GGGGCCACATCTGCTCCTACCGCCGCATCAACATCCCTGGA < 41bp 0.515140144205291 0.731040957796696 0.064619154 0.2065286 prediction 0.431801627182811 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45944540 chr22:45944543 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_121679 0 0 1 RPS3 POSTAR2 ENCODE chr22:45944492-45944608
64251 chr2 86433246 86433246 1 + A G UCEC 86433243 + 86433223 86433263 41 TTACAGGAATCCTACGGCCCCTGAATATTTTGGCATCTTCA TTACAGGAATCCTACGGCCCCTGGATATTTTGGCATCTTCA < 41bp 0.561518669589139 0.777414303480413 0.02123639 0.06683463 prediction 0.431791267782548 Functional Gain - MRPL35 ENSG00000132313 CDS Human protein_coding chr2:86433243 chr2:86433246 nonsynonymous SNV 0.973 0 24 hm5C_associated_SNPs_121685 0 0 3 DDX3X POSTAR2 ENCODE chr2:86433245-86433293
64251 chr10 25312868 25312868 1 + C G rs41279890 25312867 + 25312847 25312887 41 TTTCAACAAGACACGTTTGGCCTGAAGACTGTGAACAGAAG TTTCAACAAGACACGTTTGGCGTGAAGACTGTGAACAGAAG < 41bp 0.404528431688061 0.715894516144928 0.0044184923 0.014018536 prediction 0.431789032289856 Functional Gain - THNSL1 ENSG00000185875 CDS Human protein_coding chr10:25312867 chr10:25312868 nonsynonymous SNV 0.637 1 22 hm5C_associated_SNPs_121687 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr10:25312852-25312880
64251 chr7 140402710 140402710 1 + C T HNSC 140402709 + 140402689 140402729 41 AGCCCCGGTATAGACAGTTCCCCCAGCTGACCAGATCCCAG AGCCCCGGTATAGACAGTTCCTCCAGCTGACCAGATCCCAG < 41bp 0.622551192488559 0.838441508369046 0.20246318 0.9322957 prediction 0.431780631760976 Functional Gain - NDUFB2 ENSG00000090266 CDS Human protein_coding chr7:140402709 chr7:140402710 nonsynonymous SNV 0.774 4 22 hm5C_associated_SNPs_121690 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:140402680-140402740
64251 chr12 51072495 51072495 1 + A G ACC 51072492 + 51072472 51072512 41 AGACCCCAACCAGCCCAAGCCGGAGGGACGGCAGATGACCC AGACCCCAACCAGCCCAAGCCGGGGGGACGGCAGATGACCC < 41bp 0.478171133558326 0.715881209648696 0.76308364 0.8976919 prediction 0.431762419297392 Functional Gain - DIP2B ENSG00000066084 CDS Human protein_coding chr12:51072492 chr12:51072495 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_121691 0 0 7 BUD13 POSTAR2 ENCODE chr12:51072404-51072518
64251 chr3 155628929 155628929 1 + A G UCEC 155628926 + 155628906 155628946 41 TTACTCAGTGGTGGAGTAGACTCAACAGTTTGTACAGCTTT TTACTCAGTGGTGGAGTAGACTCGACAGTTTGTACAGCTTT < 41bp 0.547850034938576 0.763725526203825 0.21341419 0.48384833 prediction 0.431750982530499 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155628926 chr3:155628929 synonymous SNV . 0 24 hm5C_associated_SNPs_121694 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:155628900-155628980
64251 chr19 42794822 42794822 1 + C T SKCM 42794821 + 42794801 42794841 41 CCTGCAGACACTGGTGCTGCCCCCAAACAAGGAGGAGCAAG CCTGCAGACACTGGTGCTGCCTCCAAACAAGGAGGAGCAAG < 41bp 0.448990270743352 0.715871218405923 0.21885389 0.9558626 prediction 0.431742436811846 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42794821 chr19:42794822 synonymous SNV . 0 22 hm5C_associated_SNPs_121696 0 0 5 BUD13 POSTAR2 ENCODE chr19:42794785-42794850
64251 chr19 44739372 44739372 1 + A G UCEC 44739369 + 44739349 44739389 41 GGAAGGGGCTTCAGTTATAGCCCAAGGCTTCCCCTTCATCC GGAAGGGGCTTCAGTTATAGCCCGAGGCTTCCCCTTCATCC < 41bp 0.600761797932345 0.816633015140698 0.106545955 0.17038584 prediction 0.431742434416705 Functional Gain - ZNF227 ENSG00000131115 CDS Human protein_coding chr19:44739369 chr19:44739372 synonymous SNV . 0 24 hm5C_associated_SNPs_121697 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:44739360-44739380
64251 chr1 217955536 217955536 1 + C T UCEC 217955535 + 217955515 217955555 41 GGGGCCCTTCCGAGATATCACCGAAGTATTAGAACAACGCT GGGGCCCTTCCGAGATATCACTGAAGTATTAGAACAACGCT < 41bp 0.574483340858164 0.790341329280765 0.7839066 0.11372337 prediction 0.431715976845203 Functional Gain - SPATA17 ENSG00000162814 CDS Human protein_coding chr1:217955535 chr1:217955536 synonymous SNV . 0 22 hm5C_associated_SNPs_121703 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:217955535-217955549
64251 chr4 166231877 166231877 1 + T C STAD 166231874 + 166231854 166231894 41 GTGTTAAATGGATTATTATACGCTGTGGGAGGCTTTGATGG GTGTTAAATGGATTATTATACGCCGTGGGAGGCTTTGATGG < 41bp 0.532770074367867 0.748627123509735 0.020292372 0.068751246 prediction 0.431714098283735 Functional Gain - KLHL2 ENSG00000109466 CDS Human protein_coding chr4:166231874 chr4:166231877 synonymous SNV . 0 24 hm5C_associated_SNPs_121704 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr4:166231868-166231884
64251 chr17 42636454 42636454 1 + C T STAD 42636453 + 42636433 42636473 41 GGTGCGCATCGGCGTCTTCTCCGTGCTCTACACAGTGCCCG GGTGCGCATCGGCGTCTTCTCTGTGCTCTACACAGTGCCCG < 41bp 0.495351229337875 0.715838686135257 0.35216624 0.27819735 prediction 0.431677372270515 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636453 chr17:42636454 synonymous SNV . 0 22 hm5C_associated_SNPs_121709 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42636427-42636524
64251 chr2 73467659 73467659 1 + C A LUAD 73467658 + 73467638 73467678 41 TTTGGTAGACATTGCCAAATCCCAAGATGCTGAGGTAGGAA TTTGGTAGACATTGCCAAATCACAAGATGCTGAGGTAGGAA < 41bp 0.593929352737951 0.809759538046437 0.05228284 0.114328355 prediction 0.43166037061697 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73467658 chr2:73467659 synonymous SNV . 0 22 hm5C_associated_SNPs_121712 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:73467632-73467660
64251 chr3 99979897 99979897 1 + C A LUSC 99979893 + 99979873 99979913 41 GAGAAGATGTGCCGCCGCTGCCAACGTCGAGCGGCGACGGC GAGAAGATGTGCCGCCGCTGCCAAAGTCGAGCGGCGACGGC < 41bp 0.335902886018809 0.715817623029467 0.22464764 0.62186277 prediction 0.431635246058934 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:99979893 chr3:99979897 nonsynonymous SNV 0.927 1 25 hm5C_associated_SNPs_121716 0 0 8 GRWD1 POSTAR2 ENCODE chr3:99979853-99979914
64251 chr17 18113030 18113030 1 + C G rs369554250 18113029 + 18113009 18113049 41 GGGGCTTTGTGTACAGAGGTCCGGGTCTGAGACCTCATAGG GGGGCTTTGTGTACAGAGGTCGGGGTCTGAGACCTCATAGG < 41bp 0.609273342498795 0.825088539592387 0.5639732 0.88538957 prediction 0.431630394187184 Functional Gain - ALKBH5 ENSG00000091542 UTR3 Human protein_coding chr17:18113029 chr17:18113030 . . 0 22 hm5C_associated_SNPs_121718 0 0 26 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18112928-18113055
64251 chr11 64088536 64088536 1 + A G LIHC 64088533 + 64088513 64088553 41 CCATCTTTGGGAATCGACGTCTCAAGAGGTAAAAGTGGAGA CCATCTTTGGGAATCGACGTCTCGAGAGGTAAAAGTGGAGA < 41bp 0.559790889079446 0.77560328047538 0.28093684 0.5884037 prediction 0.431624782791869 Functional Gain - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64088533 chr11:64088536 nonsynonymous SNV 0.977 3 24 hm5C_associated_SNPs_121721 0 0 2 LIN28B POSTAR2 ENCODE chr11:64088496-64088536
64251 chr12 4721739 4721739 1 + C A BRCA 4721735 + 4721715 4721755 41 ACCTTCTCTTCGCATGACCCCGGACCAGGCCCTCAAGCATG ACCTTCTCTTCGCATGACCCCGGAACAGGCCCTCAAGCATG < 41bp 0.299058714623792 0.715809960888052 0.20624548 0.3603148 prediction 0.431619921776104 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4721735 chr12:4721739 nonsynonymous SNV 0.985 0 25 hm5C_associated_SNPs_121723 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:4721719-4721757
64251 chr16 31138587 31138587 1 + C T LIHC 31138586 + 31138566 31138606 41 CTGGTATTTCTCACCATTCCCCGAAGACTATGGGAAACAGC CTGGTATTTCTCACCATTCCCTGAAGACTATGGGAAACAGC < 41bp 0.449300126940839 0.715808532179618 0.07218152 0.02793771 prediction 0.431617064359235 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31138586 chr16:31138587 synonymous SNV . 0 22 hm5C_associated_SNPs_121725 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31138569-31138597
64251 chr1 65886398 65886398 1 + T A rs3790435 65886394 + 65886374 65886414 41 AGCCGGAAGCAGCCGCGGCCCCAGTTCGGGAGACATGGCGG AGCCGGAAGCAGCCGCGGCCCCAGATCGGGAGACATGGCGG < 41bp 0.571377157209092 0.787184184393295 0.85842955 0.80435705 prediction 0.431614054368407 Functional Gain - LEPR;LEPROT ENSG00000116678;ENSG00000213625 UTR5 Human other chr1:65886394 chr1:65886398 . . 0 25 hm5C_associated_SNPs_121726 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:65886385-65886410
64251 chr2 192250671 192250671 1 + A G LUSC 192250668 + 192250648 192250688 41 CCTCAGACCTGGCACAGTCACTGATGAGACCTTCTTAGAAA CCTCAGACCTGGCACAGTCACTGGTGAGACCTTCTTAGAAA < 41bp 0.554594113825415 0.770399992636934 0.15996978 0.427649 prediction 0.431611757623039 Functional Gain - MYO1B ENSG00000128641 CDS Human protein_coding chr2:192250668 chr2:192250671 nonsynonymous SNV 0.948 5 24 hm5C_associated_SNPs_121727 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:192250659-192250685
64251 chr16 1706284 1706284 1 + C T SKCM 1706283 + 1706263 1706303 41 GCTTGAGCAGCCCGGACGCTCCTGACAGGCCTCCTCCCAGG GCTTGAGCAGCCCGGACGCTCTTGACAGGCCTCCTCCCAGG < 41bp 0.595376718519587 0.811171029974485 0.10916656 0.16990346 prediction 0.431588622909794 Functional Gain - CRAMP1 ENSG00000007545 CDS Human protein_coding chr16:1706283 chr16:1706284 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_121732 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:1706263-1706315
64251 chr3 155632314 155632314 1 + A G rs61750369 155632311 + 155632291 155632331 41 AGCAAAACGTTAAATATGACCACAAGTCCTGAAGAGAAAAG AGCAAAACGTTAAATATGACCACGAGTCCTGAAGAGAAAAG < 41bp 0.530258679901712 0.746052722745922 0.12024698 0.07978952 prediction 0.431588085688421 Functional Gain - GMPS ENSG00000163655 CDS Human protein_coding chr3:155632311 chr3:155632314 synonymous SNV . 0 24 hm5C_associated_SNPs_121733 0 0 8 CSTF2 POSTAR2 GSE37401,GSM917676 chr3:155632278-155632316
64251 chr16 2815446 2815446 1 + T A PCPG 2815442 + 2815422 2815462 41 CCTTCCCAGACGAAGCAGATCAGGTTCATCAAGCAAAGGCA CCTTCCCAGACGAAGCAGATCAGGATCATCAAGCAAAGGCA < 41bp 0.400051737795751 0.715790885210496 0.21214068 0.160258 prediction 0.431581770420991 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815442 chr16:2815446 synonymous SNV . 0 25 hm5C_associated_SNPs_121734 0 0 11 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2815420-2815460
64251 chr19 1227892 1227892 1 + C G rs550127419 1227891 + 1227871 1227911 41 GTGGAGACTACTGGCCCCGCCCGTGGCCTCGTGCTCCGCAG GTGGAGACTACTGGCCCCGCCGGTGGCCTCGTGCTCCGCAG < 41bp 0.64952154467329 0.865309952675243 0.760304 0.45359138 prediction 0.431576816003906 Functional Gain - STK11 ENSG00000118046 UTR3 Human protein_coding chr19:1227891 chr19:1227892 . . 0 22 hm5C_associated_SNPs_121735 1 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1227864-1227896
64251 chr22 35660861 35660861 1 + C T SKCM 35660860 + 35660840 35660880 41 TGGAAGCAGTGGGGAACTACCCCTAGAGGATGGTGGCTCCC TGGAAGCAGTGGGGAACTACCTCTAGAGGATGGTGGCTCCC < 41bp 0.621705824551252 0.837487607320857 0.03968367 0.90464795 prediction 0.431563565539211 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35660860 chr22:35660861 synonymous SNV . 0 22 hm5C_associated_SNPs_121739 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr22:35660845-35660865
64251 chr14 20824111 20824111 1 + C T SKCM 20824110 + 20824090 20824130 41 TGAAAACAGAGCTACAAAGCCCAGAACACCCATTGGACCAA TGAAAACAGAGCTACAAAGCCTAGAACACCCATTGGACCAA < 41bp 0.626424945494085 0.842200940937394 0.13539785 0.09751335 prediction 0.431551990886617 Functional Gain - PARP2 ENSG00000129484 CDS Human protein_coding chr14:20824110 chr14:20824111 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_121741 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:20824080-20824112
64251 chr8 95888452 95888452 1 + T C rs34558403 95888450 + 95888430 95888470 41 ACTGAATTCTGTCTTTCAGTCATGATGCTATGGACTCCTAC ACTGAATTCTGTCTTTCAGTCACGATGCTATGGACTCCTAC < 41bp 0.435051569656167 0.71575780198955 0.12276447 0.069645315 prediction 0.431515603979101 Functional Gain - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95888450 chr8:95888452 synonymous SNV . 0 23 hm5C_associated_SNPs_121748 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:95888419-95888455
64251 chr19 18685888 18685888 1 + T C LIHC 18685886 + 18685866 18685906 41 GGTGCTATGCTCGCCTTCACCCTCGTGCTGTCAACTGCCGC GGTGCTATGCTCGCCTTCACCCCCGTGCTGTCAACTGCCGC < 41bp 0.454792520657056 0.715744532384549 0.1879023 0.14625373 prediction 0.431489064769097 Functional Gain - UBA52 ENSG00000221983 CDS Human protein_coding chr19:18685886 chr19:18685888 synonymous SNV . 0 23 hm5C_associated_SNPs_121754 0 0 58 UPF1 POSTAR2 GSE69586,GSM1704218 chr19:18685860-18685900
64251 chr16 3339479 3339479 1 + C T GBM 3339478 + 3339458 3339498 41 GTGCTGCTTCCTGACCAGGCCCGAGGGGAGGTGCCCTGGAG GTGCTGCTTCCTGACCAGGCCTGAGGGGAGGTGCCCTGGAG < 41bp 0.4791747185516 0.715736798557124 0.1871424 0.32255757 prediction 0.431473597114248 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3339478 chr16:3339479 stopgain 0.100 0 22 hm5C_associated_SNPs_121755 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3339457-3339503
64251 chr7 139026191 139026191 1 + C G LUSC 139026190 + 139026170 139026210 41 CTTCTGCGGGAGTTGCGCTACCTGAGCGCGGCCACCGGCCG CTTCTGCGGGAGTTGCGCTACGTGAGCGCGGCCACCGGCCG < 41bp 0.672937104023247 0.888659040157647 0.27422628 0.37003314 prediction 0.4314438722688 Functional Gain - C7orf55-LUC7L2;FMC1 ENSG00000164898;ENSG00000269955 CDS Human other chr7:139026190 chr7:139026191 nonsynonymous SNV 0.957 0 22 hm5C_associated_SNPs_121765 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:139026129-139026196
64251 chr5 134229293 134229293 1 + C T GBM 134229292 + 134229272 134229312 41 CCTCACTTTAACTCTCTGCCCCGGGCATTTCCAGCTCTTCA CCTCACTTTAACTCTCTGCCCTGGGCATTTCCAGCTCTTCA < 41bp 0.579372027515381 0.79509336914434 0.02679646 0.0028237104 prediction 0.431442683257917 Functional Gain - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134229292 chr5:134229293 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121766 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:134229260-134229324
64251 chr13 114202701 114202701 1 + C T BLCA 114202700 + 114202680 114202720 41 GATCGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCT GATCGTCTCTGCGGGGCTTGCTCAGGTCAGCGAGTTTTCCT < 41bp 0.61160145155838 0.827312006383701 0.11191258 0.17520154 prediction 0.431421109650642 Functional Gain - TMCO3 ENSG00000150403 CDS Human protein_coding chr13:114202700 chr13:114202701 synonymous SNV . 0 22 hm5C_associated_SNPs_121773 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr13:114202674-114202705
64251 chrX 84520143 84520143 1 + A G rs72549428 84520140 + 84520120 84520160 41 TAAGGTGGAACAGAAATTGTCACAGAGAGTGAGTACACCAG TAAGGTGGAACAGAAATTGTCACGGAGAGTGAGTACACCAG < 41bp 0.485945412817422 0.715709605819445 0.29447 0.4526391 prediction 0.43141921163889 Functional Gain - ZNF711 ENSG00000147180 CDS Human protein_coding chrX:84520140 chrX:84520143 synonymous SNV . 0 24 hm5C_associated_SNPs_121775 2 0 13 CPSF6 POSTAR2 GSE37401,GSM917664 chrX:84520120-84520180
64251 chr17 71232048 71232048 1 + T C GBM 71232046 + 71232026 71232066 41 AACCAAGGCTCAGTTTTACGCATCAGAGAAAACCTCTCCTA AACCAAGGCTCAGTTTTACGCACCAGAGAAAACCTCTCCTA < 41bp 0.63007001994486 0.84576517307728 0.122351974 0.27222648 prediction 0.431390306264841 Functional Gain - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232046 chr17:71232048 nonsynonymous SNV 0.017 0 23 hm5C_associated_SNPs_121782 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:71232030-71232061
64251 chr17 80685442 80685442 1 + T A rs576216402 80685438 + 80685418 80685458 41 ACCTTTCCACTGCCTCCTCCCTGCTCTCCTGTGCAGGAATG ACCTTTCCACTGCCTCCTCCCTGCACTCCTGTGCAGGAATG < 41bp 0.399683682047119 0.715690728233601 0.013456255 0.060996056 prediction 0.431381456467201 Functional Gain - FN3KRP ENSG00000141560 UTR3 Human protein_coding chr17:80685438 chr17:80685442 . . 0 25 hm5C_associated_SNPs_121784 0 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:80685413-80685447
64251 chr20 42088845 42088845 1 + C A THCA 42088841 + 42088821 42088861 41 GGCTTATTGAAGATAAGCCACGCACAAGCCATAGGCGATCT GGCTTATTGAAGATAAGCCACGCAAAAGCCATAGGCGATCT < 41bp 0.285940609199948 0.71568811933328 0.020477116 0.0191091 prediction 0.431376238666559 Functional Gain - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42088841 chr20:42088845 nonsynonymous SNV 0.991 0 25 hm5C_associated_SNPs_121786 0 0 1 PRPF8 POSTAR2 ENCODE chr20:42088843-42088890
64251 chr16 14761658 14761658 1 + C T COAD 14761657 + 14761637 14761677 41 GATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT GATCTTGTGGTCAAGGAACTCTGGCGGCTGGAAACCCAGGT < 41bp 0.485410358518414 0.715676673439547 0.6169027 0.17368704 prediction 0.431353346879093 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14761657 chr16:14761658 nonsynonymous SNV 0.977 3 22 hm5C_associated_SNPs_121795 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:14761590-14761663
64251 chr21 45736184 45736184 1 + C G SKCM 45736183 + 45736163 45736203 41 ATCGCTGAGGGTGCCATTGACCGCAACGGGAAGCCCATCTC ATCGCTGAGGGTGCCATTGACGGCAACGGGAAGCCCATCTC < 41bp 0.67328137424019 0.888956714387135 0.17982098 0.86738145 prediction 0.43135068029389 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45736183 chr21:45736184 nonsynonymous SNV 0.096 1 22 hm5C_associated_SNPs_121797 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:45736167-45736201
64251 chr7 140373544 140373544 1 + C A HNSC 140373540 + 140373520 140373560 41 GCTCCACCTGCTTCTGAAAGCCACCGAGACCTCAGGCCCAA GCTCCACCTGCTTCTGAAAGCCACAGAGACCTCAGGCCCAA < 41bp 0.307544767981732 0.715658133262743 0.14252192 0.14923948 prediction 0.431316266525487 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140373540 chr7:140373544 synonymous SNV . 0 25 hm5C_associated_SNPs_121807 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:140373517-140373565
64251 chr8 126011148 126011148 1 + C A rs548801611 126011144 + 126011124 126011164 41 CCCGCAGCCCCCGTGCCTTCCGGCCGCTGCTCGCCGTCGCC CCCGCAGCCCCCGTGCCTTCCGGCAGCTGCTCGCCGTCGCC < 41bp 0.682381417698952 0.898039214260981 0.69068426 0.86718464 prediction 0.431315593124056 Functional Gain - SQLE ENSG00000104549 UTR5 Human protein_coding chr8:126011144 chr8:126011148 . . 0 25 hm5C_associated_SNPs_121808 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:126011140-126011160
64251 chr1 45479660 45479660 1 + C T BLCA 45479659 + 45479639 45479679 41 AGCGCTGGCTCTATCAGAGACCTCAGGCTAGTCACCAGCTG AGCGCTGGCTCTATCAGAGACTTCAGGCTAGTCACCAGCTG < 41bp 0.442546863751728 0.715626811863971 0.032135338 0.05729124 prediction 0.431253623727941 Functional Gain - UROD ENSG00000126088 CDS Human protein_coding chr1:45479659 chr1:45479660 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_121824 0 0 4 RPS3 POSTAR2 ENCODE chr1:45479600-45479673
64251 chr4 17616319 17616319 1 + C A LUAD 17616315 + 17616295 17616335 41 GGGTATGTTTTCTGGGCAGCCACCCGGTCCCCCTCAGGCCC GGGTATGTTTTCTGGGCAGCCACCAGGTCCCCCTCAGGCCC < 41bp 0.72013034800128 0.93575178346469 0.26269537 0.2805467 prediction 0.431242870926819 Functional Gain - MED28 ENSG00000118579 CDS Human protein_coding chr4:17616315 chr4:17616319 synonymous SNV . 0 25 hm5C_associated_SNPs_121826 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:17616270-17616326
64251 chr18 8798140 8798140 1 + C T SKCM 8798139 + 8798119 8798159 41 AGGCTCGGGGAGCTTGGAGTCCAGGGGGGTCACCAGGCGGA AGGCTCGGGGAGCTTGGAGTCTAGGGGGGTCACCAGGCGGA < 41bp 0.584871021140025 0.800489962646502 0.8880899 0.87559533 prediction 0.431237883012954 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8798139 chr18:8798140 stopgain 0.647 0 22 hm5C_associated_SNPs_121828 0 0 2 BUD13 POSTAR2 ENCODE chr18:8798085-8798161
64251 chr19 58131725 58131725 1 + T C SKCM 58131723 + 58131703 58131743 41 CCATGGACTGAAACTTCACACATGTGGGGCATGTGGGAGAC CCATGGACTGAAACTTCACACACGTGGGGCATGTGGGAGAC < 41bp 0.612380280812485 0.827994281024819 0.07234058 0.044183016 prediction 0.431228000424668 Functional Gain - ZNF134 ENSG00000213762 CDS Human protein_coding chr19:58131723 chr19:58131725 nonsynonymous SNV 0.968 3 23 hm5C_associated_SNPs_121829 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:58131648-58131761
64251 chr19 56163822 56163822 1 + C A STAD 56163821 + 56163801 56163841 41 GACGCCGACGGGGTCCTCTGCCGGTACAAGAAGATCCTGGG GACGCCGACGGGGTCCTCTGCAGGTACAAGAAGATCCTGGG < 41bp 0.454605451315078 0.715612787407302 0.34620982 0.85642594 prediction 0.431225574814605 Functional Gain - CCDC106 ENSG00000173581 CDS Human protein_coding chr19:56163821 chr19:56163822 synonymous SNV . 0 22 hm5C_associated_SNPs_121832 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:56163793-56163823
64251 chr10 135165920 135165920 1 + A G STAD 135165917 + 135165897 135165937 41 CTCCTGGGACCGGAGGAAGACCAAGACCACATCTACCACCC CTCCTGGGACCGGAGGAAGACCAGGACCACATCTACCACCC < 41bp 0.477389844358758 0.715609230655976 0.74118024 0.91805047 prediction 0.431218461311952 Functional Gain - PRAP1 ENSG00000165828;ENSG00000198546 CDS Human other chr10:135165917 chr10:135165920 synonymous SNV . 0 24 hm5C_associated_SNPs_121834 0 0 3 LARP4 POSTAR2 ENCODE chr10:135165888-135166049
64251 chr11 82921384 82921384 1 + C T HNSC 82921383 + 82921363 82921403 41 AATCTGACAGCCCAGGATGACCGGGGATGCACTCCTTTACA AATCTGACAGCCCAGGATGACTGGGGATGCACTCCTTTACA < 41bp 0.585932598309766 0.801540991521878 0.9029733 0.68583333 prediction 0.431216786424224 Functional Gain - ANKRD42 ENSG00000137494 CDS Human protein_coding chr11:82921383 chr11:82921384 nonsynonymous SNV 0.982 2 22 hm5C_associated_SNPs_121836 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:82921378-82921410
64251 chr19 1299917 1299917 1 + C G rs530063037 1299916 + 1299896 1299936 41 CCTCTTCCTCAGCACCATCCCCGTGCTCTGGACCCTCCTGG CCTCTTCCTCAGCACCATCCCGGTGCTCTGGACCCTCCTGG < 41bp 0.400794028830156 0.715601754800806 0.29817718 0.87546533 prediction 0.431203509601612 Functional Gain - EFNA2 ENSG00000099617 CDS Human protein_coding chr19:1299916 chr19:1299917 synonymous SNV . 0 22 hm5C_associated_SNPs_121839 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:1299911-1299941
64251 chr7 107545882 107545882 1 + A G UCEC 107545879 + 107545859 107545899 41 TACGAAAGCTGATGGCGGCACTCAGGTTATTGATACAAAGA TACGAAAGCTGATGGCGGCACTCGGGTTATTGATACAAAGA < 41bp 0.484008209615996 0.715599206086106 0.0620113 0.14561644 prediction 0.431198412172211 Functional Gain - DLD ENSG00000091140 CDS Human protein_coding chr7:107545879 chr7:107545882 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_121840 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:107545846-107545884
64251 chr1 227935782 227935782 1 + A G STAD 227935779 + 227935759 227935799 41 GCCGTGGCAGACGCATCTGTCCCAAGGACCCGGGGCGAGGA GCCGTGGCAGACGCATCTGTCCCGAGGACCCGGGGCGAGGA < 41bp 0.589321907953566 0.804918940626605 0.16102293 0.74361134 prediction 0.431194065346079 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227935779 chr1:227935782 synonymous SNV . 0 24 hm5C_associated_SNPs_121843 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:227935746-227935782
64251 chr19 58038908 58038908 1 + C G rs111934070 58038904 + 58038884 58038924 41 ACGCCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGGCCCC ACGCCGGATCCCGGGCTTTACCGCGCGCCTTTCCAGGCCCC < 41bp 0.544673780529251 0.760268788766939 0.643948 0.8783766 prediction 0.431190016475378 Functional Gain - ZNF549 ENSG00000121406 UTR5 Human protein_coding chr19:58038904 chr19:58038908 . . 0 25 hm5C_associated_SNPs_121844 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:58038890-58038925
64251 chr4 148555359 148555359 1 + C T SKCM 148555358 + 148555338 148555378 41 ATCCCAGGAAAAAATTGTTTCCCGAGGATCAAGATCAAAAT ATCCCAGGAAAAAATTGTTTCTCGAGGATCAAGATCAAAAT < 41bp 0.601450545098988 0.817022878794854 0.6379227 0.35275954 prediction 0.431144667391732 Functional Gain - TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555358 chr4:148555359 nonsynonymous SNV 0.241 0 22 hm5C_associated_SNPs_121849 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:148555340-148555360
64251 chr6 7585739 7585739 1 + A G ACC 7585736 + 7585716 7585756 41 GTGCATGGGAGGATAAGCACCGAAGAAGCCATCCGGAAGGG GTGCATGGGAGGATAAGCACCGAGGAAGCCATCCGGAAGGG < 41bp 0.473016394522703 0.715568245314232 0.35525864 0.59516925 prediction 0.431136490628464 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7585736 chr6:7585739 synonymous SNV . 0 24 hm5C_associated_SNPs_121852 0 0 1 RPS3 POSTAR2 ENCODE chr6:7585669-7585776
64251 chr9 138012868 138012868 1 + C G rs571208929 138012867 + 138012847 138012887 41 AAATTAGCTAAATCATGTAACCGCAGATAGGAAGGGCTCGC AAATTAGCTAAATCATGTAACGGCAGATAGGAAGGGCTCGC < 41bp 0.453274042838814 0.715562676046937 0.21004617 0.5641854 prediction 0.431125352093873 Functional Gain - OLFM1 ENSG00000130558 UTR3 Human protein_coding chr9:138012867 chr9:138012868 . . 0 22 hm5C_associated_SNPs_121853 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:138012808-138012872
64251 chr6 26020953 26020953 1 + T G BLCA 26020951 + 26020931 26020971 41 GTGCGCGAGATTGCGCAGGACTTTAAAACAGACCTGCGTTT GTGCGCGAGATTGCGCAGGACTGTAAAACAGACCTGCGTTT < 41bp 0.387831429471614 0.715562135490697 0.29841703 0.14785364 prediction 0.431124270981393 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26020951 chr6:26020953 nonsynonymous SNV 0.976 2 23 hm5C_associated_SNPs_121854 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:26020880-26021000
64251 chr10 77167277 77167277 1 + C T COAD 77167276 + 77167256 77167296 41 TCTGCCAGTGCTTCGGAAACCCGCCTGGCCAGGTTCGCCCG TCTGCCAGTGCTTCGGAAACCTGCCTGGCCAGGTTCGCCCG < 41bp 0.539788934738574 0.755334269119641 0.14939931 0.0968335 prediction 0.431090668762133 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77167276 chr10:77167277 . . 0 22 hm5C_associated_SNPs_121861 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr10:77167259-77167278
64251 chr17 55083586 55083586 1 + A G COAD 55083583 + 55083563 55083603 41 GAAGATGATGAGACTGGTGACTCAGCAAGAATAGGATGGAT GAAGATGATGAGACTGGTGACTCGGCAAGAATAGGATGGAT < 41bp 0.555113498231785 0.770642454207363 0.11691308 0.070032954 prediction 0.431057911951156 Functional Gain - SCPEP1 ENSG00000121064 CDS Human protein_coding chr17:55083583 chr17:55083586 nonsynonymous SNV 0.936 0 24 hm5C_associated_SNPs_121865 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:55083564-55083593
64251 chr18 2908947 2908947 1 + C A THCA 2908946 + 2908926 2908966 41 CTTTCTGTTTTTCAGGATACCCGAAGTCACCTCCTGTAGCT CTTTCTGTTTTTCAGGATACCAGAAGTCACCTCCTGTAGCT < 41bp 0.445386357848116 0.715528341508152 0.32296687 0.42781863 prediction 0.431056683016304 Functional Gain - EMILIN2 ENSG00000132205 CDS Human protein_coding chr18:2908946 chr18:2908947 nonsynonymous SNV 0.801 2 22 hm5C_associated_SNPs_121866 0 0 2 BUD13 POSTAR2 ENCODE chr18:2908891-2909038
64251 chr6 10751379 10751379 1 + C T rs1046427 10751378 + 10751358 10751398 41 CCTTCTAGGCAGCGTGCCGTCCCTGGCTGCAGGGCTGCTCT CCTTCTAGGCAGCGTGCCGTCTCTGGCTGCAGGGCTGCTCT < 41bp 0.47975775467589 0.715518828743879 0.16090426 0.2619835 prediction 0.431037657487757 Functional Gain - TMEM14B ENSG00000137210 CDS Human protein_coding chr6:10751378 chr6:10751379 synonymous SNV . 0 22 hm5C_associated_SNPs_121873 0 0 6 DDX3X POSTAR2 ENCODE chr6:10751359-10751440
64251 chr16 84363069 84363069 1 + C A rs148750304 84363068 + 84363048 84363088 41 CAGGACACCTGGCCATCAAACCCAGTTTGGCCCAGCCTGGT CAGGACACCTGGCCATCAAACACAGTTTGGCCCAGCCTGGT < 41bp 0.463156416809195 0.715516062099869 0.3635822 0.28430933 prediction 0.431032124199738 Functional Gain - WFDC1 ENSG00000103175 UTR3 Human protein_coding chr16:84363068 chr16:84363069 . . 0 22 hm5C_associated_SNPs_121874 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:84363046-84363071
64251 chr3 45043095 45043095 1 + T C rs34376719 45043092 + 45043072 45043112 41 GCTGTAAAGGCTGCTCTCTTCAATACAAGGTAAGTCTTCCT GCTGTAAAGGCTGCTCTCTTCAACACAAGGTAAGTCTTCCT < 41bp 0.539692974910773 0.75520678147529 0.054318607 0.05693072 prediction 0.431027613129036 Functional Gain - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45043092 chr3:45043095 synonymous SNV . 0 24 hm5C_associated_SNPs_121876 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr3:45043046-45043096
64251 chr22 23524102 23524102 1 + C T LUSC 23524101 + 23524081 23524121 41 CCCCGCAGGTCCTACTCCCCCCGGAGTTTTGAGGATTGCGG CCCCGCAGGTCCTACTCCCCCTGGAGTTTTGAGGATTGCGG < 41bp 0.579425264257474 0.794933534566411 0.42409337 0.18603885 prediction 0.431016540617874 Functional Gain - BCR ENSG00000186716 CDS Human protein_coding chr22:23524101 chr22:23524102 nonsynonymous SNV 0.976 3 22 hm5C_associated_SNPs_121881 0 0 11 RBM15B POSTAR2 GSE78030,GSM2064711 chr22:23524100-23524120
64251 chr3 67058594 67058594 1 + C T LUSC 67058593 + 67058573 67058613 41 TACCTTAAACTGGTACTTTTCCAGAACAAACTCCATTTATT TACCTTAAACTGGTACTTTTCTAGAACAAACTCCATTTATT < 41bp 0.473883181402213 0.715508031051656 0.020945191 0.008121669 prediction 0.431016062103312 Functional Gain - KBTBD8 ENSG00000163376 CDS Human protein_coding chr3:67058593 chr3:67058594 stopgain 0.999 0 22 hm5C_associated_SNPs_121882 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr3:67058563-67058595
64251 chr9 117360009 117360009 1 + C T LUSC 117360008 + 117359988 117360028 41 CCAGAAATCCATGAAAACTACCGCATAAATGGATAGAAGAG CCAGAAATCCATGAAAACTACTGCATAAATGGATAGAAGAG < 41bp 0.590812987386203 0.806312195346981 0.09989989 0.49845824 prediction 0.430998415921556 Functional Gain - ATP6V1G1 ENSG00000136888 CDS Human protein_coding chr9:117360008 chr9:117360009 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_121885 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr9:117359919-117360011
64251 chr16 87678559 87678559 1 + C T STAD 87678558 + 87678538 87678578 41 CCCCTGCGGGCCAGCAAGATCCGCGAGAAGGTGGACCGCGC CCCCTGCGGGCCAGCAAGATCTGCGAGAAGGTGGACCGCGC < 41bp 0.605687787183226 0.821174744757112 0.862806 0.71731836 prediction 0.430973915147772 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87678558 chr16:87678559 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121891 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr16:87678555-87678574
64251 chr12 12510111 12510111 1 + C A rs184467411 12510110 + 12510090 12510130 41 GGCAAAGCCAGTGTCATCTGCCGGTTCTCTTAGGGCTCCCG GGCAAAGCCAGTGTCATCTGCAGGTTCTCTTAGGGCTCCCG < 41bp 0.471833375496607 0.715486539677374 0.41097715 0.75111204 prediction 0.430973079354747 Functional Gain - BORCS5 ENSG00000165714 UTR5 Human protein_coding chr12:12510110 chr12:12510111 . . 0 22 hm5C_associated_SNPs_121892 0 0 5 EIF3G POSTAR2 GSE65004,GSM1585673 chr12:12510102-12510130
64251 chr16 70505194 70505194 1 + C G rs376353924 70505190 + 70505170 70505210 41 ACCTTGTCCTGCAGGGACACCACACGCGGCTACACGGCTCC ACCTTGTCCTGCAGGGACACCACAGGCGGCTACACGGCTCC < 41bp 0.415232127826916 0.715486370937174 0.5166691 0.8690975 prediction 0.430972741874349 Functional Gain - FUK ENSG00000157353 CDS Human protein_coding chr16:70505190 chr16:70505194 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_121893 0 0 1 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr16:70505180-70505200
64251 chr19 56172483 56172483 1 + C T STAD 56172482 + 56172462 56172502 41 TGTGACCCCAACGCCGGTGCCCGTGGTCGGGAGCCAGATGA TGTGACCCCAACGCCGGTGCCTGTGGTCGGGAGCCAGATGA < 41bp 0.465722686038179 0.715471817662643 0.3998486 0.07295331 prediction 0.430943635325285 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56172482 chr19:56172483 synonymous SNV . 0 22 hm5C_associated_SNPs_121896 0 0 16 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:56172413-56172507
64251 chr17 41365219 41365219 1 + T G BRCA 41365215 + 41365195 41365235 41 TGTGCCTTGTGAAGGAACTGCTGATGCCAGCTTCGTGACTT TGTGCCTTGTGAAGGAACTGCTGAGGCCAGCTTCGTGACTT < 41bp 0.500447125152576 0.715914210210624 0.14223248 0.5688679 prediction 0.430934170116095 Functional Gain - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41365215 chr17:41365219 nonsynonymous SNV 0.837 0 25 hm5C_associated_SNPs_121898 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr17:41365200-41365220
64251 chr6 33170194 33170194 1 + T C rs34836401 33170192 + 33170172 33170212 41 ATACACGTGGAAGTCATGGACATGGAAGACAAGGTGAGCCC ATACACGTGGAAGTCATGGACACGGAAGACAAGGTGAGCCC < 41bp 0.491273614026252 0.715460694334465 0.2593642 0.33169955 prediction 0.43092138866893 Functional Gain - SLC39A7 ENSG00000112473 CDS Human protein_coding chr6:33170192 chr6:33170194 synonymous SNV . 0 23 hm5C_associated_SNPs_121900 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:33170051-33170203
64251 chr5 153783753 153783753 1 + C T rs6580076 153783752 + 153783732 153783772 41 TGTGCCCTACAAGGTCCCGGCCGGAGTCAGCCTGGCCCGGG TGTGCCCTACAAGGTCCCGGCTGGAGTCAGCCTGGCCCGGG < 41bp 0.589354380978797 0.804813097812439 0.46973965 0.34497112 prediction 0.430917433667284 Functional Gain - GALNT10 ENSG00000164574 CDS Human protein_coding chr5:153783752 chr5:153783753 synonymous SNV . 0 22 hm5C_associated_SNPs_121901 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr5:153783733-153783761
64251 chr8 145537689 145537689 1 + C G SKCM 145537688 + 145537668 145537708 41 CCAGGAGCCCCCCAGGCCTCCCGAGGCAGAGAACAGCAGCC CCAGGAGCCCCCCAGGCCTCCGGAGGCAGAGAACAGCAGCC < 41bp 0.392913762973683 0.71544733265303 0.7123674 0.89389443 prediction 0.430894665306061 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145537688 chr8:145537689 synonymous SNV . 0 22 hm5C_associated_SNPs_121904 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145537651-145537690
64251 chr3 195953859 195953859 1 + C G SARC 195953858 + 195953838 195953878 41 CTGGGCCCTGTGGAACTTGCCCTCACTAGCATCCTGACCTT CTGGGCCCTGTGGAACTTGCCGTCACTAGCATCCTGACCTT < 41bp 0.383321840452789 0.71544158231587 0.08182117 0.23453861 prediction 0.43088316463174 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195953858 chr3:195953859 nonsynonymous SNV 0.757 0 22 hm5C_associated_SNPs_121905 0 0 1 GRWD1 POSTAR2 ENCODE chr3:195953859-195953920
64251 chr17 42225860 42225860 1 + T C COAD 42225857 + 42225837 42225877 41 CATGTCCGCCCAGGATGAGTCTCTAGATCCTGTCATCCAAT CATGTCCGCCCAGGATGAGTCTCCAGATCCTGTCATCCAAT < 41bp 0.527218620783138 0.742654698584346 0.5782212 0.957421 prediction 0.430872155602415 Functional Gain - C17orf53 ENSG00000125319 CDS Human protein_coding chr17:42225857 chr17:42225860 nonsynonymous SNV 0.004 0 24 hm5C_associated_SNPs_121908 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:42225842-42225866
64251 chr22 21272258 21272258 1 + C T rs150673692 21272257 + 21272237 21272277 41 GTTCGACTCCTCGGACCGCTCCGCCTGGTATATGGGGCCGG GTTCGACTCCTCGGACCGCTCTGCCTGGTATATGGGGCCGG < 41bp 0.481516561427569 0.715433533313433 0.19321275 0.21825236 prediction 0.430867066626866 Functional Gain - CRKL ENSG00000099942 CDS Human protein_coding chr22:21272257 chr22:21272258 synonymous SNV . 0 22 hm5C_associated_SNPs_121910 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:21272213-21272258
64251 chr5 156723745 156723745 1 + C T STAD 156723744 + 156723724 156723764 41 AGACAGTAGAGGTGCTGGAGCCGGAGGTCACCAAGCTCATG AGACAGTAGAGGTGCTGGAGCTGGAGGTCACCAAGCTCATG < 41bp 0.592971741889324 0.808398852200081 0.72563386 0.36775917 prediction 0.430854220621512 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156723744 chr5:156723745 nonsynonymous SNV 0.884 4 22 hm5C_associated_SNPs_121915 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:156723715-156723751
64251 chr9 131476565 131476565 1 + C A KIRP 131476564 + 131476544 131476584 41 CTGCTGCCCCCCTGCAGCTCCCCGAGCACAATCAGCCCCCC CTGCTGCCCCCCTGCAGCTCCACGAGCACAATCAGCCCCCC < 41bp 0.620676009760143 0.836086320539859 0.29839867 0.24790621 prediction 0.430820621559431 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131476564 chr9:131476565 nonsynonymous SNV 0.955 0 22 hm5C_associated_SNPs_121917 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:131476541-131476569
64251 chr19 7976152 7976152 1 + C T rs182111602 7976151 + 7976131 7976171 41 GCAGCCCGAGCGCATTGACCCCCCAGACCCCACCAAGCCGG GCAGCCCGAGCGCATTGACCCTCCAGACCCCACCAAGCCGG < 41bp 0.636194346369869 0.851596550637199 0.1639381 0.94797707 prediction 0.430804408534661 Functional Gain - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976151 chr19:7976152 synonymous SNV . 0 22 hm5C_associated_SNPs_121919 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:7976145-7976174
64251 chr10 94397252 94397252 1 + T G UCEC 94397249 + 94397229 94397269 41 CCTTGGTTGAGTCACAAAAGCAATGTGGAAACCTAACTGAA CCTTGGTTGAGTCACAAAAGCAAGGTGGAAACCTAACTGAA < 41bp 0.339352203811742 0.715396767374297 0.27072462 0.89397043 prediction 0.430793534748593 Functional Gain - KIF11 ENSG00000138160 CDS Human protein_coding chr10:94397249 chr10:94397252 nonsynonymous SNV 0.331 1 24 hm5C_associated_SNPs_121922 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:94397142-94397296
64251 chr12 123738232 123738232 1 + T C GBM 123738230 + 123738210 123738250 41 GCCACGTTCCTTATGAGCACCGTGGGTTTATTTCATTTTCC GCCACGTTCCTTATGAGCACCGCGGGTTTATTTCATTTTCC < 41bp 0.466091807992871 0.715393415212645 0.33947608 0.3134902 prediction 0.430786830425291 Functional Gain - C12orf65 ENSG00000130921 CDS Human protein_coding chr12:123738230 chr12:123738232 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_121925 0 0 7 EIF3A POSTAR2 GSE65004,GSM1585664 chr12:123738220-123738240
64251 chr1 162531332 162531332 1 + C A rs182950062 162531328 + 162531308 162531348 41 CGTCCGCGTCGTCGTCTGTGCTCCCGGCGCTGACGTGTCTG CGTCCGCGTCGTCGTCTGTGCTCCAGGCGCTGACGTGTCTG < 41bp 0.707570082346519 0.922939329911866 0.28777695 0.86034393 prediction 0.430738495130694 Functional Gain - UAP1 ENSG00000117143 UTR5 Human protein_coding chr1:162531328 chr1:162531332 . . 0 25 hm5C_associated_SNPs_121934 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr1:162531320-162531340
64251 chr3 122864396 122864396 1 + C T LIHC 122864395 + 122864375 122864415 41 GCCACTGTAAGAAAATGAAGCCGGAGTTTGAGAAGGCAGCA GCCACTGTAAGAAAATGAAGCTGGAGTTTGAGAAGGCAGCA < 41bp 0.585099113907412 0.800460411648737 0.8192046 0.4999164 prediction 0.430722595482649 Functional Gain - PDIA5 ENSG00000065485 CDS Human protein_coding chr3:122864395 chr3:122864396 nonsynonymous SNV 0.898 4 22 hm5C_associated_SNPs_121938 0 0 2 BUD13 POSTAR2 ENCODE chr3:122864365-122864420
64251 chr11 44148443 44148443 1 + T C rs11828047 44148440 + 44148420 44148460 41 AGCGATGTGTTACAAGCTGGCTGTGTCCCGGTTGTCATTGC AGCGATGTGTTACAAGCTGGCTGCGTCCCGGTTGTCATTGC < 41bp 0.535775030901442 0.751131242301837 0.051620215 0.06755537 prediction 0.430712422800789 Functional Gain - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44148440 chr11:44148443 synonymous SNV . 0 24 hm5C_associated_SNPs_121942 1 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:44148431-44148468
64251 chr14 97009136 97009136 1 + C T UCEC 97009135 + 97009115 97009155 41 GGCTTGGTGGAATCAAAAATCCGAATCCTGGTTGGAAGCTT GGCTTGGTGGAATCAAAAATCTGAATCCTGGTTGGAAGCTT < 41bp 0.524720758132398 0.740075218201852 0.3108027 0.22694266 prediction 0.430708920138908 Functional Gain - PAPOLA ENSG00000090060 CDS Human protein_coding chr14:97009135 chr14:97009136 stopgain 1.000 1 22 hm5C_associated_SNPs_121944 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:97009110-97009137
64251 chr4 1808341 1808341 1 + T C PAAD 1808338 + 1808318 1808358 41 CTCCCCGTACCCCGGCATCCCTGTGGAGGAGCTCTTCAAGC CTCCCCGTACCCCGGCATCCCTGCGGAGGAGCTCTTCAAGC < 41bp 0.511245820236175 0.726599248806161 0.19780555 0.29513562 prediction 0.430706857139971 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1808338 chr4:1808341 nonsynonymous SNV 0.986 4 24 hm5C_associated_SNPs_121945 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr4:1808332-1808373
64251 chr16 69184577 69184577 1 + T C rs147819992 69184574 + 69184554 69184594 41 CATCACACTCATGACGTGCGCACTGTGGCCCACAGCCCAAC CATCACACTCATGACGTGCGCACCGTGGCCCACAGCCCAAC < 41bp 0.520090032677965 0.735419752234078 0.06836331 0.08711642 prediction 0.430659439112225 Functional Gain - UTP4 ENSG00000141076 CDS Human protein_coding chr16:69184574 chr16:69184577 synonymous SNV . 0 24 hm5C_associated_SNPs_121954 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:69184562-69184585
64251 chr2 178082493 178082493 1 + C T BLCA 178082492 + 178082472 178082512 41 GGGGCTATGGTGGTGGTGGACCAGGATATGGAAACCAAGGT GGGGCTATGGTGGTGGTGGACTAGGATATGGAAACCAAGGT < 41bp 0.594846265090096 0.810172044181576 0.39186925 0.36588752 prediction 0.430651558182959 Functional Gain - HNRNPA3 ENSG00000170144 CDS Human protein_coding chr2:178082492 chr2:178082493 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_121957 0 0 2 AARS POSTAR2 ENCODE chr2:178082432-178082495
64251 chr3 100467657 100467657 1 + C A rs536168502 100467656 + 100467636 100467676 41 GACTTTCTAGCTTCCCTTGTCCGGAGGATATTAAAATGCTA GACTTTCTAGCTTCCCTTGTCAGGAGGATATTAAAATGCTA < 41bp 0.586888033285041 0.802213058221437 0.85524976 0.89070386 prediction 0.430650049872791 Functional Gain - TFG ENSG00000114354 UTR3 Human protein_coding chr3:100467656 chr3:100467657 . . 0 22 hm5C_associated_SNPs_121958 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:100467537-100467668
64251 chr11 5624735 5624735 1 + C A LUSC 5624731 + 5624711 5624751 41 CCTGTGTGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCC CCTGTGTGCCAGACCAGCTACCAGACAGGGAACCTGCGGCC < 41bp 0.302374369063571 0.715306782392192 0.13466701 0.25118452 prediction 0.430613564784383 Functional Gain - TRIM6;TRIM6-TRIM34 ENSG00000121236;ENSG00000258588 CDS Human other chr11:5624731 chr11:5624735 nonsynonymous SNV 0.010 2 25 hm5C_associated_SNPs_121963 0 0 1 AARS POSTAR2 ENCODE chr11:5624726-5624735
64251 chr4 166263045 166263045 1 + C A BLCA 166263041 + 166263021 166263061 41 GATCGAATTTTTGGAACAGACTCTCAGTATAATGCCTATAA GATCGAATTTTTGGAACAGACTCTAAGTATAATGCCTATAA < 41bp 0.305772751090518 0.715304221081558 0.043007463 0.77442217 prediction 0.430608442163116 Functional Gain - MSMO1 ENSG00000052802 CDS Human protein_coding chr4:166263041 chr4:166263045 nonsynonymous SNV 0.418 1 25 hm5C_associated_SNPs_121964 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350201 chr4:166263013-166263046
64251 chr16 20792105 20792105 1 + T C UCEC 20792102 + 20792082 20792122 41 ATCATGGCCATATTCTTTACCAGTGGAACAAGTGGATATCC ATCATGGCCATATTCTTTACCAGCGGAACAAGTGGATATCC < 41bp 0.515603903956099 0.73090435778192 0.17552963 0.57837033 prediction 0.430600907651643 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20792102 chr16:20792105 synonymous SNV . 0 24 hm5C_associated_SNPs_121966 0 0 4 BUD13 POSTAR2 ENCODE chr16:20792091-20792160
64251 chr2 220379729 220379729 1 + C T SKCM 220379728 + 220379708 220379748 41 CTGGCCCGGGGCTACCTGACCCGGCCTCACCTGGTGGCAAT CTGGCCCGGGGCTACCTGACCTGGCCTCACCTGGTGGCAAT < 41bp 0.484641602320887 0.715284641632167 0.41415924 0.39789647 prediction 0.430569283264334 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379728 chr2:220379729 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_121974 0 0 1 RBM15 POSTAR2 ENCODE chr2:220379653-220379732
64251 chr12 49666815 49666815 1 + C T rs11542115 49666814 + 49666794 49666834 41 GAGCAATACCACAGCTGTTGCCGAGGCCTGGGCTCGCCTGG GAGCAATACCACAGCTGTTGCTGAGGCCTGGGCTCGCCTGG < 41bp 0.55436382952135 0.769647898169591 0.9169805 0.7570018 prediction 0.430568137296481 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666814 chr12:49666815 synonymous SNV . 0 22 hm5C_associated_SNPs_121975 0 0 46 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:49666794-49666838
64251 chr12 109536308 109536308 1 + C A LUSC 109536307 + 109536287 109536327 41 GCCCTCCTCGCCGCTGAGTGCCGAGCAGTTGGACCGGATCC GCCCTCCTCGCCGCTGAGTGCAGAGCAGTTGGACCGGATCC < 41bp 0.617172382661439 0.832452228404013 0.2449665 0.83472824 prediction 0.430559691485148 Functional Gain - UNG ENSG00000076248 CDS Human protein_coding chr12:109536307 chr12:109536308 synonymous SNV . 0 22 hm5C_associated_SNPs_121977 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:109536268-109536314
64251 chr19 42798196 42798196 1 + C T SKCM 42798195 + 42798175 42798215 41 CAGTCTCTGGCCACCTCACCCCGGGCCATCCTGGGCTCTTA CAGTCTCTGGCCACCTCACCCTGGGCCATCCTGGGCTCTTA < 41bp 0.463177400026644 0.715274559128188 0.9151529 0.90775704 prediction 0.430549118256376 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42798195 chr19:42798196 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_121980 0 0 1 PPIG POSTAR2 ENCODE chr19:42798193-42798217
64251 chr8 104427338 104427338 1 - G A HNSC 104427339 - 104427319 104427359 41 TCTGTGCCCCGTTCTTGCCCCCTCAGTACTAGAGTCTCCGG TCTGTGCCCCGTTCTTGCCCCTTCAGTACTAGAGTCTCCGG < 41bp 0.510769723025429 0.726038961674875 0.20038095 0.2958535 prediction 0.430538477298893 Functional Gain - DCAF13 ENSG00000164934 CDS Human protein_coding chr8:104427339 chr8:104427338 synonymous SNV . 0 22 hm5C_associated_SNPs_121982 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585665 chr8:104427318-104427342
64251 chr11 74876892 74876892 1 + C T SKCM 74876891 + 74876871 74876911 41 GGCAGCCGGGTGCACCGACCCCGAATGATTGGCTATGGGGC GGCAGCCGGGTGCACCGACCCTGAATGATTGGCTATGGGGC < 41bp 0.456863878005283 0.715268856190145 0.31069517 0.066227615 prediction 0.430537712380289 Functional Gain - SLCO2B1 ENSG00000137491 CDS Human protein_coding chr11:74876891 chr11:74876892 stopgain 0.060 1 22 hm5C_associated_SNPs_121983 0 0 1 BUD13 POSTAR2 ENCODE chr11:74876825-74876895
64251 chr3 138340322 138340322 1 + A G UCEC 138340319 + 138340299 138340339 41 TTGCTTTAAGTGACGGAGTCCACAAGATCGAATTTGAACAT TTGCTTTAAGTGACGGAGTCCACGAGATCGAATTTGAACAT < 41bp 0.550253541767981 0.765509734962147 0.082422376 0.084700376 prediction 0.430512386388331 Functional Gain - FAIM ENSG00000158234 CDS Human protein_coding chr3:138340319 chr3:138340322 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_121985 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:138340284-138340355
64251 chr16 31141854 31141854 1 + C A LIHC 31141853 + 31141833 31141873 41 GACCTGGGCAAGCTCAGCTACCGCAGCTACTGGTCCTGGGT GACCTGGGCAAGCTCAGCTACAGCAGCTACTGGTCCTGGGT < 41bp 0.612791968667842 0.828041807492787 0.49392205 0.30481157 prediction 0.43049967764989 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31141853 chr16:31141854 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_121989 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:31141829-31141862
64251 chr17 46136986 46136986 1 + A G PAAD 46136983 + 46136963 46137003 41 CCCGGCGGCAGGAGAGGAAGCCAAAGGACCGGAGAAAGTGA CCCGGCGGCAGGAGAGGAAGCCAGAGGACCGGAGAAAGTGA < 41bp 0.483144981722293 0.715249732063038 0.8325316 0.89289355 prediction 0.430499464126076 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46136983 chr17:46136986 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_121990 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:46136979-46137024
64251 chr8 23114092 23114092 1 + C T STAD 23114091 + 23114071 23114111 41 ACGCAAAGTGGAGTCCTTATCCCAGGAAGCAGAGAGGTAAC ACGCAAAGTGGAGTCCTTATCTCAGGAAGCAGAGAGGTAAC < 41bp 0.619698516805828 0.834942060320722 0.6150366 0.17080995 prediction 0.430487087029788 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23114091 chr8:23114092 synonymous SNV . 0 22 hm5C_associated_SNPs_121993 0 0 1 PPIG POSTAR2 ENCODE chr8:23114035-23114107
64251 chr2 110373095 110373095 1 + C T STAD 110373094 + 110373074 110373114 41 CAGGACGAGCGGGGGTTACACCGCCCTGCACTTGGCAGCCA CAGGACGAGCGGGGGTTACACTGCCCTGCACTTGGCAGCCA < 41bp 0.564600887574711 0.779840349017319 0.3533575 0.34671587 prediction 0.430478922885216 Functional Gain - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373094 chr2:110373095 synonymous SNV . 0 22 hm5C_associated_SNPs_121996 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:110373087-110373116
64251 chr1 156704212 156704212 1 + C T COAD 156704211 + 156704191 156704231 41 GCAGCACTGGAGACAGTCATCCGACGGGCCCGGCCCGAGCT GCAGCACTGGAGACAGTCATCTGACGGGCCCGGCCCGAGCT < 41bp 0.578588288169429 0.79382591009799 0.6175462 0.3674611 prediction 0.430475243857122 Functional Gain - RRNAD1 ENSG00000143303 CDS Human protein_coding chr1:156704211 chr1:156704212 stopgain 0.818 1 22 hm5C_associated_SNPs_121999 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr1:156704200-156704221
64251 chr10 70949119 70949119 1 + A G COAD 70949116 + 70949096 70949136 41 CACGCAATCCAGAAATACTTCTCAGCAAAGTCTGGAGTGTA CACGCAATCCAGAAATACTTCTCGGCAAAGTCTGGAGTGTA < 41bp 0.479284508205522 0.715237257166868 0.034399748 0.05390781 prediction 0.430474514333737 Functional Gain - SUPV3L1 ENSG00000156502 CDS Human protein_coding chr10:70949116 chr10:70949119 synonymous SNV . 0 24 hm5C_associated_SNPs_122000 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:70949112-70949189
64251 chr12 56555179 56555179 1 + C T UCEC 56555178 + 56555158 56555198 41 TTCCTTTCCACAGAGCTCGTCCGCATGGTGCTGAATGGCTG TTCCTTTCCACAGAGCTCGTCTGCATGGTGCTGAATGGCTG < 41bp 0.474796351580124 0.715228034213584 0.06407717 0.21411976 prediction 0.430456068427169 Functional Gain - MYL6 ENSG00000092841 CDS Human protein_coding chr12:56555178 chr12:56555179 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_122004 0 0 43 PTBP1 POSTAR2 GSE19323,GSM480479 chr12:56555160-56555180
64251 chr7 65705728 65705728 1 + C T BRCA 65705727 + 65705707 65705747 41 GAGGAAACCAGGGTCATTCCCCGAATCCTGGCCCTGAAGCA GAGGAAACCAGGGTCATTCCCTGAATCCTGGCCCTGAAGCA < 41bp 0.593724919192474 0.808948674518566 0.28619707 0.16822222 prediction 0.430447510652184 Functional Gain - TPST1 ENSG00000169902 CDS Human protein_coding chr7:65705727 chr7:65705728 stopgain 1.000 1 22 hm5C_associated_SNPs_122008 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:65705696-65705749
64251 chr16 8943042 8943042 1 + C A rs72766381 8943041 + 8943021 8943061 41 CGGGCTTGTAACTGTCTGAGCCCCGGATCCGGTGGGGTGAA CGGGCTTGTAACTGTCTGAGCACCGGATCCGGTGGGGTGAA < 41bp 0.534684165131208 0.749905385639244 0.14734322 0.19251698 prediction 0.430442441016073 Functional Gain - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8943041 chr16:8943042 . . 0 22 hm5C_associated_SNPs_122009 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:8942974-8943044
64251 chr2 191537858 191537858 1 + C G LGG 191537857 + 191537837 191537877 41 GGAGAAAGAGATGAATTATCCCCAAAGAGAATTAAAGTGGA GGAGAAAGAGATGAATTATCCGCAAAGAGAATTAAAGTGGA < 41bp 0.404354479701779 0.715218814090733 0.031190664 0.07643679 prediction 0.430437628181466 Functional Gain - NAB1 ENSG00000138386 CDS Human protein_coding chr2:191537857 chr2:191537858 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_122011 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:191537841-191537867
64251 chr19 580426 580426 1 + C T BRCA 580425 + 580405 580445 41 AGTACTCCTGCGTCTTCCTCCCCGAGCCCATGGGCACGGCC AGTACTCCTGCGTCTTCCTCCTCGAGCCCATGGGCACGGCC < 41bp 0.613968928708396 0.829187210195563 0.19395778 0.25070643 prediction 0.430436562974333 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:580425 chr19:580426 nonsynonymous SNV 0.156 3 22 hm5C_associated_SNPs_122012 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:580380-580440
64251 chrX 129147887 129147887 1 + C T UCEC 129147886 + 129147866 129147906 41 TCCCCGCCTTTGCTCCTACACCGGTGCCTGCACCCACCCCA TCCCCGCCTTTGCTCCTACACTGGTGCCTGCACCCACCCCA < 41bp 0.532001817099317 0.747217525384953 0.34200788 0.24077109 prediction 0.430431416571272 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147886 chrX:129147887 nonsynonymous SNV 0.180 2 22 hm5C_associated_SNPs_122014 0 0 13 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:129147877-129147907
64251 chr5 156816398 156816398 1 + T A HNSC 156816394 + 156816374 156816414 41 CTGTGGAGCGCCATGCAGTTCGTGTACTGCATCCCTGTGGG CTGTGGAGCGCCATGCAGTTCGTGAACTGCATCCCTGTGGG < 41bp 0.388503668348449 0.715204947418868 0.25815672 0.3240955 prediction 0.430409894837736 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156816394 chr5:156816398 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_122019 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:156816395-156816434
64251 chr17 7466977 7466977 1 + C T SKCM 7466976 + 7466956 7466996 41 CCCCCCGGGGGCCACCTCCACCCCGGCTGGGTCTGCTAGGT CCCCCCGGGGGCCACCTCCACTCCGGCTGGGTCTGCTAGGT < 41bp 0.463854645027676 0.715199213334717 0.19503143 0.26278833 prediction 0.430398426669433 Functional Gain - SENP3 ENSG00000161956 CDS Human protein_coding chr17:7466976 chr17:7466977 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_122021 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:7466951-7466987
64251 chr10 134218152 134218152 1 + C A UCEC 134218151 + 134218131 134218171 41 TCCGGCCTCTTTGGCCTACCCCCGTTGGCTCCGCTGCCCCA TCCGGCCTCTTTGGCCTACCCACGTTGGCTCCGCTGCCCCA < 41bp 0.45972725847855 0.715197870600199 0.47629693 0.45143142 prediction 0.430395741200398 Functional Gain - PWWP2B ENSG00000171813 CDS Human protein_coding chr10:134218151 chr10:134218152 nonsynonymous SNV 0.076 0 22 hm5C_associated_SNPs_122022 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:134218130-134218165
64251 chr15 90814622 90814622 1 + T C UCEC 90814620 + 90814600 90814640 41 CCTCCGGGGCTCTGGAAATACCTCAAAGCTGCTCCCTGCAG CCTCCGGGGCTCTGGAAATACCCCAAAGCTGCTCCCTGCAG < 41bp 0.624704364070979 0.839892884746224 0.19004136 0.21851954 prediction 0.430377041350489 Functional Gain - NGRN ENSG00000182768 CDS Human protein_coding chr15:90814620 chr15:90814622 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_122027 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:90814562-90814640
64251 chr19 38780920 38780920 1 + C T STAD 38780919 + 38780899 38780939 41 GCCTGCATGCTCCGCTGCTTCCGTAAGTCTGCAGCCCCTCA GCCTGCATGCTCCGCTGCTTCTGTAAGTCTGCAGCCCCTCA < 41bp 0.593530224637554 0.808717343745702 0.61009264 0.26487482 prediction 0.430374238216295 Functional Gain - SPINT2 ENSG00000167642;ENSG00000267748 CDS Human other chr19:38780919 chr19:38780920 nonsynonymous SNV 0.299 2 22 hm5C_associated_SNPs_122029 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:38780880-38780921
64251 chr6 116600496 116600496 1 - G C rs199933032 116600497 - 116600477 116600517 41 GTGCGCCACCGTCTCAGCAGCCGTGGCTGAGAGGGAGAGCG GTGCGCCACCGTCTCAGCAGCGGTGGCTGAGAGGGAGAGCG < 41bp 0.401863239835719 0.715172097536018 0.08003166 0.1975685 prediction 0.430344195072037 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600497 chr6:116600496 synonymous SNV . 0 22 hm5C_associated_SNPs_122034 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr6:116600475-116600497
64251 chr14 60581501 60581501 1 + T G SKCM 60581498 + 60581478 60581518 41 ATTTTTACCCTTTCTGTGGGCACTTGGGACTCTGCCCCCAC ATTTTTACCCTTTCTGTGGGCACGTGGGACTCTGCCCCCAC < 41bp 0.319509726151863 0.715151562915144 0.380431 0.838373 prediction 0.430303125830289 Functional Gain - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60581498 chr14:60581501 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_122044 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:60581488-60581522
64251 chrX 101382207 101382207 1 + C A LUAD 101382206 + 101382186 101382226 41 CCCAGCTGAGGATGATATACCCAGGAAAGCCAAAAGAAAAA CCCAGCTGAGGATGATATACCAAGGAAAGCCAAAAGAAAAA < 41bp 0.632740092516327 0.847889668021154 0.78724784 0.835819 prediction 0.430299151009653 Functional Gain - TCEAL2 ENSG00000184905 CDS Human protein_coding chrX:101382206 chrX:101382207 synonymous SNV . 0 22 hm5C_associated_SNPs_122045 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:101382179-101382210
64251 chr13 53035209 53035209 1 + T C rs539183420 53035207 + 53035187 53035227 41 TTTCAGGCTGATAAAGAAAACATGAAGAGACCTGCAGAGAG TTTCAGGCTGATAAAGAAAACACGAAGAGACCTGCAGAGAG < 41bp 0.623823670469016 0.83896972942301 0.36577356 0.2957549 prediction 0.430292117907989 Functional Gain - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53035207 chr13:53035209 nonsynonymous SNV 0.011 0 23 hm5C_associated_SNPs_122046 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:53035183-53035254
64251 chr16 70166131 70166131 1 + C G CESC 70166130 + 70166110 70166150 41 TCTGGGGGCTTTGAGAAGAACCCGAAACCAATTTTCACTGA TCTGGGGGCTTTGAGAAGAACGCGAAACCAATTTTCACTGA < 41bp 0.669748911247812 0.884884909011809 0.2906257 0.5422163 prediction 0.430271995527994 Functional Gain - PDPR ENSG00000090857 CDS Human protein_coding chr16:70166130 chr16:70166131 nonsynonymous SNV 0.981 2 22 hm5C_associated_SNPs_122048 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:70166097-70166135
64251 chr9 19336301 19336301 1 + C T UCEC 19336300 + 19336280 19336320 41 AGCCCGTGGCCTAGCAGTACCCGCAGTGGTATTTTCTTATG AGCCCGTGGCCTAGCAGTACCTGCAGTGGTATTTTCTTATG < 41bp 0.612269765642533 0.827401216362971 0.20294854 0.3221386 prediction 0.430262901440875 Functional Gain - DENND4C ENSG00000137145 CDS Human protein_coding chr9:19336300 chr9:19336301 nonsynonymous SNV 0.985 3 22 hm5C_associated_SNPs_122050 0 0 6 SF3B4 POSTAR2 ENCODE chr9:19336235-19336314
64251 chr11 7531000 7531000 1 + C A LUAD 7530996 + 7530976 7531016 41 GTAGGCCGAGCATTGGTTTACCAGCACTCCCCCTCAACTTA GTAGGCCGAGCATTGGTTTACCAGAACTCCCCCTCAACTTA < 41bp 0.307502653645224 0.715131188544325 0.21700716 0.26589388 prediction 0.43026237708865 Functional Gain - OLFML1 ENSG00000183801 CDS Human protein_coding chr11:7530996 chr11:7531000 nonsynonymous SNV 0.927 3 25 hm5C_associated_SNPs_122051 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:7530991-7531035
64251 chr17 17965200 17965200 1 + T C LIHC 17965197 + 17965177 17965217 41 GATCACACGATCAAAGACATCAGTGGTGCTTCTTTTGCCGG GATCACACGATCAAAGACATCAGCGGTGCTTCTTTTGCCGG < 41bp 0.501977506755024 0.717108489854308 0.31801343 0.42523107 prediction 0.430261966198569 Functional Gain - GID4 ENSG00000141034 CDS Human protein_coding chr17:17965197 chr17:17965200 synonymous SNV . 0 24 hm5C_associated_SNPs_122052 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr17:17965177-17965209
64251 chr14 57052567 57052567 1 + T C rs200822110 57052565 + 57052545 57052585 41 TTTGGTTCAATTGCCTACCGCGTCAATCTTCTCTGTGGCTT TTTGGTTCAATTGCCTACCGCGCCAATCTTCTCTGTGGCTT < 41bp 0.427160368713536 0.715130719877246 0.13993701 0.09949064 prediction 0.430261439754491 Functional Gain - TMEM260 ENSG00000070269 CDS Human protein_coding chr14:57052565 chr14:57052567 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_122053 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:57052537-57052613
64251 chrX 140995322 140995322 1 + C T SKCM 140995321 + 140995301 140995341 41 CCCTGTCTTCTCTCCATTTTCCTCAGAGTCCTCCTGAGTGG CCCTGTCTTCTCTCCATTTTCTTCAGAGTCCTCCTGAGTGG < 41bp 0.470644137294355 0.715130485907734 0.08937174 0.13226742 prediction 0.430260971815467 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140995321 chrX:140995322 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_122054 0 0 1 PTBP1 POSTAR2 ENCODE chrX:140995299-140995416
64251 chr2 99182207 99182207 1 + C A CESC 99182203 + 99182183 99182223 41 ACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGG ACTTCCAGCGCCTCCGCAGACATGATGCCCGTCATCACAGG < 41bp 0.297193387117102 0.715122325424687 0.027740955 0.07582453 prediction 0.430244650849374 Functional Gain - INPP4A ENSG00000040933 CDS Human protein_coding chr2:99182203 chr2:99182207 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_122058 0 0 1 DDX24 POSTAR2 ENCODE chr2:99182096-99182212
64251 chr7 134719207 134719207 1 + A G UCEC 134719204 + 134719184 134719224 41 CATGGACATTTCAATTTCCACACAACAAAGATACCTGCTAC CATGGACATTTCAATTTCCACACGACAAAGATACCTGCTAC < 41bp 0.570666702965136 0.785788531931308 0.030478746 0.10305223 prediction 0.430243657932344 Functional Gain - AGBL3 ENSG00000146856 CDS Human protein_coding chr7:134719204 chr7:134719207 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_122059 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:134719188-134719213
64251 chr19 34663587 34663587 1 + C A STAD 34663583 + 34663563 34663603 41 CCTTACATCGGCAGCAAGATCAGCCTCATCTCCAAGGCGGA CCTTACATCGGCAGCAAGATCAGCATCATCTCCAAGGCGGA < 41bp 0.713435655894682 0.928553861880613 0.92616534 0.8831371 prediction 0.430236411971862 Functional Gain - LSM14A ENSG00000257103 CDS Human protein_coding chr19:34663583 chr19:34663587 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_122061 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:34663500-34663597
64251 chr2 206590675 206590675 1 + C T PAAD 206590674 + 206590654 206590694 41 CCTCTGGGCATGGAGTCTGGCCGGATTGCTAATGAACAGAT CCTCTGGGCATGGAGTCTGGCTGGATTGCTAATGAACAGAT < 41bp 0.611947225096059 0.827065198265412 0.2061682 0.24909753 prediction 0.430235946338706 Functional Gain - NRP2 ENSG00000118257 CDS Human protein_coding chr2:206590674 chr2:206590675 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_122062 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:206590653-206590676
64251 chr8 40011331 40011331 1 + C T SKCM 40011330 + 40011310 40011350 41 AGGACAAAAGACAAGCTTTTCCAGTTTCTGAAACTGCGGAA AGGACAAAAGACAAGCTTTTCTAGTTTCTGAAACTGCGGAA < 41bp 0.521067099963279 0.736178780368233 0.22904122 0.2566607 prediction 0.430223360809908 Functional Gain - C8orf4 ENSG00000176907 CDS Human protein_coding chr8:40011330 chr8:40011331 stopgain 1.000 1 22 hm5C_associated_SNPs_122063 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr8:40011240-40011340
64251 chr7 30325151 30325151 1 + A G rs557498081 30325148 + 30325128 30325168 41 AGGTGCCCAGCGCGCACCAGCCCAGCGCCTCCGGCGGCGCC AGGTGCCCAGCGCGCACCAGCCCGGCGCCTCCGGCGGCGCC < 41bp 0.585467413363516 0.800571040163047 0.402803 0.87066984 prediction 0.430207253599062 Functional Gain - ZNRF2 ENSG00000180233 CDS Human protein_coding chr7:30325148 chr7:30325151 nonsynonymous SNV 0.889 0 24 hm5C_associated_SNPs_122066 0 0 1 NOL12 POSTAR2 ENCODE chr7:30325117-30325190
64251 chr14 105715779 105715779 1 + C T LIHC 105715778 + 105715758 105715798 41 TCAAATCTGAAATTCACATTCCAGACGTGGAGCCCGCAGCC TCAAATCTGAAATTCACATTCTAGACGTGGAGCCCGCAGCC < 41bp 0.604402278464854 0.819499865832251 0.36829323 0.3030815 prediction 0.430195174734796 Functional Gain - BTBD6 ENSG00000184887 CDS Human protein_coding chr14:105715778 chr14:105715779 nonsynonymous SNV 0.407 4 22 hm5C_associated_SNPs_122067 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105715774-105715814
64251 chr19 14153355 14153355 1 + C T CESC 14153354 + 14153334 14153374 41 TACAAAGTGTATGGCCGCTGCCGGATGGAGAAAGAAGAGGA TACAAAGTGTATGGCCGCTGCTGGATGGAGAAAGAAGAGGA < 41bp 0.619690530341491 0.834787407059418 0.5851213 0.29197544 prediction 0.430193753435856 Functional Gain - IL27RA ENSG00000104998 CDS Human protein_coding chr19:14153354 chr19:14153355 nonsynonymous SNV 0.036 2 22 hm5C_associated_SNPs_122068 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr19:14153343-14153360
64251 chr12 58174353 58174353 1 + T A SKCM 58174349 + 58174329 58174369 41 ACCTCCTGCCCCAGCATTTCCAACTGGAGCTGGCTCAGCGG ACCTCCTGCCCCAGCATTTCCAACAGGAGCTGGCTCAGCGG < 41bp 0.678750892168893 0.893836863298909 0.27859432 0.25741264 prediction 0.430171942260031 Functional Gain - EEF1AKMT3 ENSG00000123427 CDS Human protein_coding chr12:58174349 chr12:58174353 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_122070 0 0 2 PTBP1 POSTAR2 GSE57278,GSM1486177 chr12:58174320-58174360
64251 chrX 152034435 152034435 1 + C G CESC 152034434 + 152034414 152034454 41 CGCCCTCATGGCATTTTCGGCCCAAGGGACCCGCAGTTGGT CGCCCTCATGGCATTTTCGGCGCAAGGGACCCGCAGTTGGT < 41bp 0.378723168066469 0.715085918319888 0.19508827 0.45041224 prediction 0.430171836639775 Functional Gain - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152034434 chrX:152034435 nonsynonymous SNV 0.989 5 22 hm5C_associated_SNPs_122071 0 0 3 GRWD1 POSTAR2 ENCODE chrX:152034430-152034486
64251 chr2 202131411 202131411 1 + C T BRCA 202131410 + 202131390 202131430 41 TTCCTGAAGGAGCTGCTCTTCCGAATTAATAGACTGGATTT TTCCTGAAGGAGCTGCTCTTCTGAATTAATAGACTGGATTT < 41bp 0.508854652409858 0.723937635868302 0.4294992 0.27151412 prediction 0.430165966916889 Functional Gain - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202131410 chr2:202131411 stopgain 0.252 0 22 hm5C_associated_SNPs_122073 0 0 2 RBM15 POSTAR2 ENCODE chr2:202131372-202131439
64251 chr6 121768373 121768373 1 + T G BRCA 121768371 + 121768351 121768391 41 GGTGTCAATGTGGACATGCACTTGAAGCAGATTGAGATAAA GGTGTCAATGTGGACATGCACTGGAAGCAGATTGAGATAAA < 41bp 0.677929818054882 0.892996975297776 0.0331119 0.16370043 prediction 0.430134314485788 Functional Gain - GJA1 ENSG00000152661 CDS Human protein_coding chr6:121768371 chr6:121768373 nonsynonymous SNV 0.940 3 23 hm5C_associated_SNPs_122079 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917665 chr6:121768345-121768374
64251 chr1 113232719 113232719 1 + C T PAAD 113232718 + 113232698 113232738 41 GAGGAAGGAGAGAGACCTGACCGGTAACTCCTCCCTCCAAC GAGGAAGGAGAGAGACCTGACTGGTAACTCCTCCCTCCAAC < 41bp 0.475116500892435 0.715055928327406 0.2017858 0.10528955 prediction 0.430111856654813 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113232718 chr1:113232719 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_122085 0 0 2 BUD13 POSTAR2 ENCODE chr1:113232673-113232720
64251 chr7 154735774 154735774 1 - T C rs144323105 154735777 - 154735757 154735797 41 AGGAGCTGCTGCGCTTCCTTCACATGCTCTTGTTTTCCAGC AGGAGCTGCTGCGCTTCCTTCACGTGCTCTTGTTTTCCAGC < 41bp 0.597914438868736 0.81296598334511 0.18291906 0.39833504 prediction 0.430103088952749 Functional Gain - PAXIP1-AS2 ENSG00000214106 CDS Human antisense chr7:154735777 chr7:154735774 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_122088 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:154735774-154735775
64251 chr19 57133786 57133786 1 + C A STAD 57133785 + 57133765 57133805 41 GCAGCACCAGCGCATCCACACCGGCGAGAAGCCCTACGAGT GCAGCACCAGCGCATCCACACAGGCGAGAAGCCCTACGAGT < 41bp 0.439747353297284 0.715045614126179 0.22727308 0.41491213 prediction 0.430091228252358 Functional Gain - ZNF71 ENSG00000197951 CDS Human protein_coding chr19:57133785 chr19:57133786 synonymous SNV . 0 22 hm5C_associated_SNPs_122094 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:57133783-57133815
64251 chr20 33298941 33298941 1 + C T rs149017815 33298940 + 33298920 33298960 41 GGCTGAAGCCTGGAGTCTGCCCCCACTTCCCTTTTCTATAA GGCTGAAGCCTGGAGTCTGCCTCCACTTCCCTTTTCTATAA < 41bp 0.582077743914807 0.79711323401891 0.036296785 0.9212446 prediction 0.430070980208205 Functional Gain - TP53INP2 ENSG00000078804 UTR3 Human protein_coding chr20:33298940 chr20:33298941 . . 0 22 hm5C_associated_SNPs_122100 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:33298913-33298957
64251 chr6 26204930 26204930 1 + C A LUAD 26204929 + 26204909 26204949 41 AAAGGAGGCGCTAAGCGTCACCGTAAGGTCCTGCGAGATAA AAAGGAGGCGCTAAGCGTCACAGTAAGGTCCTGCGAGATAA < 41bp 0.583271097012972 0.798300712866299 0.067666024 0.09622303 prediction 0.430059231706653 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26204929 chr6:26204930 nonsynonymous SNV 0.024 0 22 hm5C_associated_SNPs_122102 0 0 31 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:26204840-26204940
64251 chr15 69706731 69706731 1 + C G rs376410576 69706727 + 69706707 69706747 41 CCGCGAAGTTCTAGTTCTTGCTGCCGGTCCTAACGTCCCGC CCGCGAAGTTCTAGTTCTTGCTGCGGGTCCTAACGTCCCGC < 41bp 0.467062150707216 0.715018273075944 0.17895442 0.3634775 prediction 0.430036546151889 Functional Gain - LOC145694 ENSG00000259426 ncRNA_exonic Human antisense chr15:69706727 chr15:69706731 . . 0 25 hm5C_associated_SNPs_122106 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:69706721-69706740
64251 chr2 178977544 178977544 1 + C T SKCM 178977543 + 178977523 178977563 41 GAGGAGATGCATGGCCAGTGCCTCGGCCCCAACGACACCAA GAGGAGATGCATGGCCAGTGCTTCGGCCCCAACGACACCAA < 41bp 0.561080326277134 0.776091176366461 0.22263438 0.23729181 prediction 0.430021700178655 Functional Gain - RBM45 ENSG00000155636 CDS Human protein_coding chr2:178977543 chr2:178977544 nonsynonymous SNV 0.988 5 22 hm5C_associated_SNPs_122109 0 0 1 GRWD1 POSTAR2 ENCODE chr2:178977376-178977552
64251 chr9 80851320 80851320 1 + C A UCEC 80851316 + 80851296 80851336 41 CAGCGCGGCGGACTTCTTCTCCCACTACGAGTACCTGTGCG CAGCGCGGCGGACTTCTTCTCCCAATACGAGTACCTGTGCG < 41bp 0.357584407520596 0.715009469867967 0.15281528 0.2684 prediction 0.430018939735934 Functional Gain - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80851316 chr9:80851320 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_122110 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr9:80851298-80851320
64251 chr5 53814775 53814775 1 + C T UCEC 53814774 + 53814754 53814794 41 GGAGAAGTTCCCGGTCATCTCCGTGCCCCACCTGCCCGAGA GGAGAAGTTCCCGGTCATCTCTGTGCCCCACCTGCCCGAGA < 41bp 0.485601954901065 0.715009083968971 0.5256128 0.20643032 prediction 0.430018167937941 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53814774 chr5:53814775 synonymous SNV . 0 22 hm5C_associated_SNPs_122111 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:53814770-53814797
64251 chr6 150267728 150267728 1 + T C rs78826737 150267725 + 150267705 150267745 41 CATTACTTCTCAATGGGAGACTGTATAGGATGGCTTGAGGA CATTACTTCTCAATGGGAGACTGCATAGGATGGCTTGAGGA < 41bp 0.545964589982348 0.760972567760859 0.23232672 0.5518719 prediction 0.430015955557023 Functional Gain - ULBP2 ENSG00000131015 CDS Human protein_coding chr6:150267725 chr6:150267728 synonymous SNV . 0 24 hm5C_associated_SNPs_122112 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:150267708-150267733
64251 chr15 42136739 42136739 1 + C A GBM 42136735 + 42136715 42136755 41 TGACTTCCCTGTATGGGCAGCTGGCTGGCCTGAAGGAGCTG TGACTTCCCTGTATGGGCAGCTGGATGGCCTGAAGGAGCTG < 41bp 0.293537362717696 0.715002093918073 0.40206176 0.5007078 prediction 0.430004187836146 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42136735 chr15:42136739 nonsynonymous SNV 0.782 1 25 hm5C_associated_SNPs_122114 0 0 8 CPSF4 POSTAR2 GSE37401,GSM917667 chr15:42136716-42136742
64251 chr1 156352641 156352641 1 + T C LUAD 156352638 + 156352618 156352658 41 TTTGTCACACTGATGTTTGCCTCTGTGGGCGGGGGCCTTGG TTTGTCACACTGATGTTTGCCTCCGTGGGCGGGGGCCTTGG < 41bp 0.485881988225272 0.714999692942077 0.14961368 0.85223484 prediction 0.429999385884153 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156352638 chr1:156352641 synonymous SNV . 0 24 hm5C_associated_SNPs_122117 0 0 7 GRWD1 POSTAR2 ENCODE chr1:156352621-156352660
64251 chr1 161138831 161138831 1 + A G LIHC 161138828 + 161138808 161138848 41 ACTCATTCGCCAGGCCTTGGCTGAGCGCTGGAGCCAGTGGT ACTCATTCGCCAGGCCTTGGCTGGGCGCTGGAGCCAGTGGT < 41bp 0.599196163856948 0.81419280433696 0.2566942 0.38164115 prediction 0.429993280960022 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161138828 chr1:161138831 nonsynonymous SNV 0.994 5 24 hm5C_associated_SNPs_122120 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:161138822-161138842
64251 chr22 42209354 42209354 1 + A G UCEC 42209351 + 42209331 42209371 41 TTGTGCACTATTACTTTGACCACAACTCCAACTGGAACCTC TTGTGCACTATTACTTTGACCACGACTCCAACTGGAACCTC < 41bp 0.578752466887126 0.793748669444435 0.045332104 0.028385341 prediction 0.429992405114618 Functional Gain - CCDC134 ENSG00000100147 CDS Human protein_coding chr22:42209351 chr22:42209354 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_122122 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr22:42209335-42209363
64251 chr4 124236431 124236431 1 + T G rs571565512 124236429 + 124236409 124236449 41 GCTCACTGCAAGCTCTGCCTCCTGGGTTTACTTACGCCATT GCTCACTGCAAGCTCTGCCTCCGGGGTTTACTTACGCCATT < 41bp 0.387466577894164 0.714992154484668 0.77977526 0.9261856 prediction 0.429984308969337 Functional Gain - SPATA5 ENSG00000145375 UTR3 Human protein_coding chr4:124236429 chr4:124236431 . . 0 23 hm5C_associated_SNPs_122125 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:124236410-124236446
64251 chr5 140076574 140076574 1 + C T SKCM 140076573 + 140076553 140076593 41 GTTTCAGGATCCCAGACTATCCCAGAACAAGCAGGCCCTGG GTTTCAGGATCCCAGACTATCTCAGAACAAGCAGGCCCTGG < 41bp 0.606266876867892 0.821257664932164 0.20900342 0.112445 prediction 0.429981576128545 Functional Gain - HARS2 ENSG00000112855 CDS Human protein_coding chr5:140076573 chr5:140076574 synonymous SNV . 0 22 hm5C_associated_SNPs_122127 0 0 5 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:140076542-140076577
64251 chr17 38243103 38243103 1 + C T rs2230702 38243102 + 38243082 38243122 41 CAAAAAACTGCCCATGTTCTCCGAGGTGAGTGGCAGAAGTG CAAAAAACTGCCCATGTTCTCTGAGGTGAGTGGCAGAAGTG < 41bp 0.475271208765413 0.714988817989238 0.88346934 0.5240698 prediction 0.429977635978477 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38243102 chr17:38243103 synonymous SNV . 0 22 hm5C_associated_SNPs_122128 0 0 3 AGGF1 POSTAR2 ENCODE chr17:38243091-38243190
64251 chr4 1801058 1801058 1 + C T SKCM 1801057 + 1801037 1801077 41 GCTGTGGAGCTGAGCTGTCCCCCGCCCGGGGGTGGTCCCAT GCTGTGGAGCTGAGCTGTCCCTCGCCCGGGGGTGGTCCCAT < 41bp 0.475731426747707 0.714986836290462 0.04887551 0.061452746 prediction 0.429973672580923 Functional Gain - FGFR3 ENSG00000068078 CDS Human protein_coding chr4:1801057 chr4:1801058 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_122131 0 0 12 AARS POSTAR2 ENCODE chr4:1801017-1801066
64251 chr9 38395805 38395805 1 + C T LGG 38395804 + 38395784 38395824 41 GGGCAGGACCGCCCGCTACTCCTCGGCAGCAGCCCTCCCAA GGGCAGGACCGCCCGCTACTCTTCGGCAGCAGCCCTCCCAA < 41bp 0.578004907920227 0.792986671603724 0.43278056 0.20714548 prediction 0.429963527366994 Functional Gain - ALDH1B1 ENSG00000137124 CDS Human protein_coding chr9:38395804 chr9:38395805 synonymous SNV . 0 22 hm5C_associated_SNPs_122133 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:38395804-38395805
64251 chr2 207655349 207655349 1 + C A THCA 207655345 + 207655325 207655365 41 CTTATTGTTTGGGTTCAAGCCACCCCAGAGGATTCCTTGCT CTTATTGTTTGGGTTCAAGCCACCACAGAGGATTCCTTGCT < 41bp 0.283655075211137 0.714978118130482 0.13851863 0.14352056 prediction 0.429956236260963 Functional Gain - FASTKD2 ENSG00000118246 CDS Human protein_coding chr2:207655345 chr2:207655349 nonsynonymous SNV 0.868 4 25 hm5C_associated_SNPs_122135 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:207655325-207655363
64251 chr19 1073969 1073969 1 + C T UCEC 1073968 + 1073948 1073988 41 CCATGGAAAGCCTGTATGGACCGGGCAGTGAGGGCACGCCT CCATGGAAAGCCTGTATGGACTGGGCAGTGAGGGCACGCCT < 41bp 0.544722975408685 0.759696006518582 0.23300013 0.07012215 prediction 0.429946062219796 Functional Gain - ARHGAP45 ENSG00000180448 CDS Human protein_coding chr19:1073968 chr19:1073969 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_122139 0 0 3 EFTUD2 POSTAR2 ENCODE chr19:1073946-1074001
64251 chr3 32932056 32932056 1 + C T BLCA 32932055 + 32932035 32932075 41 GTGCGGAGCCTCCTGCAGCCCCAGGAAGACGACCGAGTCAT GTGCGGAGCCTCCTGCAGCCCTAGGAAGACGACCGAGTCAT < 41bp 0.576528130941466 0.791501056346107 0.35614848 0.2877986 prediction 0.429945850809283 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32932055 chr3:32932056 stopgain 1.000 1 22 hm5C_associated_SNPs_122140 0 0 2 PPIG POSTAR2 ENCODE chr3:32932027-32932090
64251 chr7 5633137 5633137 1 + C T STAD 5633136 + 5633116 5633156 41 CCAGCGCTACAGCGTGCAGACCGCCGACCACCGCTTCCTGC CCAGCGCTACAGCGTGCAGACTGCCGACCACCGCTTCCTGC < 41bp 0.487545652646475 0.714969396518196 0.3066681 0.29232556 prediction 0.429938793036392 Functional Gain - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5633136 chr7:5633137 synonymous SNV . 0 22 hm5C_associated_SNPs_122142 0 0 8 FMR1 POSTAR2 ENCODE chr7:5633136-5633192
64251 chr11 70052536 70052536 1 + C T ACC 70052535 + 70052515 70052555 41 ACAGGAGTGGGGCCATGTCCCCGATGTCATGGAACTCAGAC ACAGGAGTGGGGCCATGTCCCTGATGTCATGGAACTCAGAC < 41bp 0.514431332430723 0.729398314741663 0.11781889 0.09239313 prediction 0.429933964621878 Functional Gain - FADD ENSG00000168040 CDS Human protein_coding chr11:70052535 chr11:70052536 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_122143 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:70052528-70052548
64251 chr4 1389435 1389435 1 + C G rs201846658 1389434 + 1389414 1389454 41 GCCCGCCTGCTCACACGTGCCCATGTGGAGTGCCTGCCTGC GCCCGCCTGCTCACACGTGCCGATGTGGAGTGCCTGCCTGC < 41bp 0.415755813983128 0.714961118536129 0.0077560544 0.013443381 prediction 0.429922237072259 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1389434 chr4:1389435 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_122147 0 0 1 RPS5 POSTAR2 ENCODE chr4:1389391-1389448
64251 chr17 38511541 38511541 1 + C T SARC 38511540 + 38511520 38511560 41 CAGGACCTGGAGCAGCCGGACCGGGTGGACATGCTGCAGGA CAGGACCTGGAGCAGCCGGACTGGGTGGACATGCTGCAGGA < 41bp 0.586243055138146 0.80118717466908 0.9216808 0.9247546 prediction 0.429888239061867 Functional Gain - RARA ENSG00000131759 CDS Human protein_coding chr17:38511540 chr17:38511541 nonsynonymous SNV 0.919 5 22 hm5C_associated_SNPs_122150 0 0 3 BUD13 POSTAR2 ENCODE chr17:38511478-38511550
64251 chr6 26384039 26384039 1 + C A HNSC 26384035 + 26384015 26384055 41 CCTAGGCCTCTGGTCTCTGCCTGCCCTGGGTGCTCATGGAA CCTAGGCCTCTGGTCTCTGCCTGCACTGGGTGCTCATGGAA < 41bp 0.416297853139361 0.714936273041751 0.07687646 0.16692388 prediction 0.429872546083503 Functional Gain - BTN2A2 ENSG00000124508 UTR5 Human protein_coding chr6:26384035 chr6:26384039 . . 0 25 hm5C_associated_SNPs_122151 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26384031-26384073
64251 chr15 40686087 40686087 1 + T C rs11541641 40686085 + 40686065 40686105 41 CCTTCTAGTCAACCACCTGACTTCAGCACACCATTACAATC CCTTCTAGTCAACCACCTGACTCCAGCACACCATTACAATC < 41bp 0.569096830600992 0.784026999892613 0.02797079 0.9259478 prediction 0.429860338583242 Functional Gain - KNSTRN ENSG00000128944 UTR3 Human protein_coding chr15:40686085 chr15:40686087 . . 0 23 hm5C_associated_SNPs_122152 0 0 14 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr15:40686054-40686122
64251 chr2 202150022 202150022 1 + T C LUSC 202150020 + 202150000 202150040 41 ATCCAGTCACTTTGCCAGAGCCTGAGAGAGCGATGTCCTCG ATCCAGTCACTTTGCCAGAGCCCGAGAGAGCGATGTCCTCG < 41bp 0.479840641220929 0.714926596971606 0.37633023 0.35282883 prediction 0.429853193943212 Functional Gain - CASP8 ENSG00000064012 CDS Human protein_coding chr2:202150020 chr2:202150022 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_122155 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:202149999-202150037
64251 chr9 119460226 119460226 1 + C T UCEC 119460225 + 119460205 119460245 41 CCCTTTTGCAGCAAGATTACCCGCATAACCAGCTTGACCCA CCCTTTTGCAGCAAGATTACCTGCATAACCAGCTTGACCCA < 41bp 0.597042054909274 0.81195356369791 0.03860709 0.15891322 prediction 0.429823017577274 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460225 chr9:119460226 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_122159 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:119460198-119460228
64251 chr19 11350433 11350433 1 + T C rs1541922 11350431 + 11350411 11350451 41 AGGAGCTGACCCTGCTCTTCCATGGGACCCTGCAGCTGGGC AGGAGCTGACCCTGCTCTTCCACGGGACCCTGCAGCTGGGC < 41bp 0.600550337670534 0.815440732940276 0.47775275 0.40435046 prediction 0.429780790539485 Functional Gain - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350431 chr19:11350433 synonymous SNV . 0 23 hm5C_associated_SNPs_122165 0 0 3 LARP4 POSTAR2 ENCODE chr19:11350417-11350464
64251 chr4 103790311 103790311 1 + C T UCEC 103790310 + 103790290 103790330 41 TATCTGAAGCGGCTCCCAGTCCCTGAAAGCATTACCGGGTT TATCTGAAGCGGCTCCCAGTCTCTGAAAGCATTACCGGGTT < 41bp 0.542398103196832 0.757280551871629 0.2745738 0.24101996 prediction 0.429764897349594 Functional Gain - CISD2 ENSG00000145354 CDS Human protein_coding chr4:103790310 chr4:103790311 nonsynonymous SNV 0.069 4 22 hm5C_associated_SNPs_122169 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:103790271-103790314
64251 chr1 9657101 9657101 1 + C T SKCM 9657100 + 9657080 9657120 41 AGCAGCTGGCCGCCTTCGCTCCCCGCGAGGAGGTGAGGCCG AGCAGCTGGCCGCCTTCGCTCTCCGCGAGGAGGTGAGGCCG < 41bp 0.448371213534634 0.714874433485737 0.27897847 0.3887694 prediction 0.429748866971474 Functional Gain - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9657100 chr1:9657101 nonsynonymous SNV 0.006 4 22 hm5C_associated_SNPs_122173 0 0 1 ZNF622 POSTAR2 ENCODE chr1:9657088-9657135
64251 chr12 7053908 7053908 1 + C G rs744167 7053907 + 7053887 7053927 41 GTGGGCCCATGAGCGGTTGTCCCCTTTCTCGCCACACGGCG GTGGGCCCATGAGCGGTTGTCGCCTTTCTCGCCACACGGCG < 41bp 0.400528853936581 0.714870174170665 0.02602765 0.18963957 prediction 0.429740348341329 Functional Gain - C12orf57 ENSG00000111678 UTR3 Human protein_coding chr12:7053907 chr12:7053908 . . 0 22 hm5C_associated_SNPs_122177 0 0 2 GEMIN5 POSTAR2 ENCODE chr12:7053892-7053930
64251 chr2 191829353 191829353 1 + C G rs13035504 191829352 + 191829332 191829372 41 GTTCCTTAGCTGCACCAGGCCCGAAGCTGTTCCCATGCTTG GTTCCTTAGCTGCACCAGGCCGGAAGCTGTTCCCATGCTTG < 41bp 0.442058005279964 0.71486773776512 0.24516869 0.7026788 prediction 0.429735475530239 Functional Gain - GLS ENSG00000115415;ENSG00000115419 UTR3 Human other chr2:191829352 chr2:191829353 . . 0 22 hm5C_associated_SNPs_122178 0 0 1 FAM120A POSTAR2 ENCODE chr2:191829327-191829386
64251 chr19 42793100 42793100 1 + C T LGG 42793099 + 42793079 42793119 41 TGAGCTCAGACACCAAGGCTCCGGGGAGCAGCTCCTGTGGG TGAGCTCAGACACCAAGGCTCTGGGGAGCAGCTCCTGTGGG < 41bp 0.567590580250902 0.782449532515543 0.7622945 0.38397962 prediction 0.429717904529284 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42793099 chr19:42793100 nonsynonymous SNV 0.937 2 22 hm5C_associated_SNPs_122180 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:42793096-42793115
64251 chr7 143088064 143088064 1 + C G rs111335084 143088060 + 143088040 143088080 41 TGCTGCTGCTTTCACTGCTGCACCCGCGCCCTCGGCCGGCC TGCTGCTGCTTTCACTGCTGCACCGGCGCCCTCGGCCGGCC < 41bp 0.437441035996227 0.714857106750084 0.13440382 0.17853886 prediction 0.429714213500167 Functional Gain - ZYX ENSG00000159840 UTR3 Human protein_coding chr7:143088060 chr7:143088064 . . 0 25 hm5C_associated_SNPs_122181 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:143087932-143088131
64251 chr13 73330022 73330022 1 + A G rs188753421 73330019 + 73329999 73330039 41 GTGCCCAGAATAAAATATACCTCATGCCTAGGGTAGGGACA GTGCCCAGAATAAAATATACCTCGTGCCTAGGGTAGGGACA < 41bp 0.495609723170503 0.714850211651262 0.010231197 0.019950867 prediction 0.429700423302524 Functional Gain - BORA;DIS3 ENSG00000083520;ENSG00000136122 UTR3 Human other chr13:73330019 chr13:73330022 . . 0 24 hm5C_associated_SNPs_122184 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:73329999-73330024
64251 chr12 112590640 112590640 1 + A G rs73207615 112590637 + 112590617 112590657 41 ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGT ATCGGTTCCTGTCTTCTGTGCACGGCAGCACTTGCCGCTGT < 41bp 0.462547186127577 0.714844259145613 0.2014037 0.6258135 prediction 0.429688518291226 Functional Gain - TRAFD1 ENSG00000135148 UTR3 Human protein_coding chr12:112590637 chr12:112590640 . . 0 24 hm5C_associated_SNPs_122187 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:112590615-112590646
64251 chr12 4796610 4796610 1 + C A rs79256293 4796609 + 4796589 4796629 41 TGTCAAAGTATTGTAAAGACCCCAAGTGATATGTGATTGTT TGTCAAAGTATTGTAAAGACCACAAGTGATATGTGATTGTT < 41bp 0.552706585515701 0.767546103899836 0.05744973 0.1304915 prediction 0.42967903676827 Functional Gain - NDUFA9 ENSG00000139180 UTR3 Human protein_coding chr12:4796609 chr12:4796610 . . 0 22 hm5C_associated_SNPs_122188 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:4796573-4796629
64251 chr1 109637040 109637040 1 + C T GBM 109637039 + 109637019 109637059 41 TTCTCTCTTTTGCCTGCTAGCCGCTGTGATTGGAACCAGGC TTCTCTCTTTTGCCTGCTAGCTGCTGTGATTGGAACCAGGC < 41bp 0.480786595414272 0.714836395097745 0.18918419 0.21724379 prediction 0.42967279019549 Functional Gain - TMEM167B ENSG00000215717 CDS Human protein_coding chr1:109637039 chr1:109637040 synonymous SNV . 0 22 hm5C_associated_SNPs_122189 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr1:109637013-109637041
64251 chr12 14577467 14577467 1 + T C SKCM 14577464 + 14577444 14577484 41 CTCTCCTCTGGTGATCCCACCTCTAGTGATCCCATCCCAGG CTCTCCTCTGGTGATCCCACCTCCAGTGATCCCATCCCAGG < 41bp 0.542861573964642 0.757686589396041 0.8796365 0.9420811 prediction 0.429650030862798 Functional Gain - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14577464 chr12:14577467 synonymous SNV . 0 24 hm5C_associated_SNPs_122191 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14577351-14577468
64251 chr2 68623917 68623917 1 + C G rs138058414 68623913 + 68623893 68623933 41 CAACTGCCTGGTGAATGTGTCTTGCGGCAGCTGCAGCAAGT CAACTGCCTGGTGAATGTGTCTTGGGGCAGCTGCAGCAAGT < 41bp 0.436199436447391 0.714815597322342 0.2927621 0.467266 prediction 0.429631194644685 Functional Gain - PLEK ENSG00000115956 UTR3 Human protein_coding chr2:68623913 chr2:68623917 . . 0 25 hm5C_associated_SNPs_122198 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:68623883-68623922
64251 chr17 41001637 41001637 1 + C T OV 41001636 + 41001616 41001656 41 AGATACCAGCTTGTGGTGACCCAGAGAAAGGAGGAGGAGTC AGATACCAGCTTGTGGTGACCTAGAGAAAGGAGGAGGAGTC < 41bp 0.463286398643295 0.714813505704113 0.8059324 0.32456082 prediction 0.429627011408227 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41001636 chr17:41001637 stopgain 0.999 0 22 hm5C_associated_SNPs_122199 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:41001624-41001651
64251 chr2 198570104 198570104 1 + T A rs202121719 198570100 + 198570080 198570120 41 CACACGTGCTGTCAGAACGCCGCCTCCTCCGCTTGCGGCCG CACACGTGCTGTCAGAACGCCGCCACCTCCGCTTGCGGCCG < 41bp 0.462179780587802 0.714809493397229 0.05274427 0.24114373 prediction 0.429618986794458 Functional Gain - MARS2 ENSG00000247626 UTR5 Human protein_coding chr2:198570100 chr2:198570104 . . 0 25 hm5C_associated_SNPs_122202 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:198570100-198570120
64251 chr9 35751705 35751705 1 + T C OV 35751703 + 35751683 35751723 41 GTGTACAGACTTGGCGAGGACGTGGTGGGGACCTTAAACTT GTGTACAGACTTGGCGAGGACGCGGTGGGGACCTTAAACTT < 41bp 0.640631149688086 0.855431365502078 0.3989321 0.4395716 prediction 0.429600431627984 Functional Gain - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35751703 chr9:35751705 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_122203 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr9:35751678-35751716
64251 chr1 211462677 211462677 1 + C A COAD 211462676 + 211462656 211462696 41 TGGTAGCAGTTTCCTGTAGTCCCAATGCAGCCAACACCATC TGGTAGCAGTTTCCTGTAGTCACAATGCAGCCAACACCATC < 41bp 0.60449436862149 0.819283480134783 0.1361244 0.2515934 prediction 0.429578223026585 Functional Gain - RCOR3 ENSG00000117625 CDS Human protein_coding chr1:211462676 chr1:211462677 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_122210 0 0 4 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr1:211462675-211462699
64251 chr1 161132782 161132782 1 + C A rs114213404 161132781 + 161132761 161132801 41 GAAATCAACCGCCGAGGCCGCCGGGCTCCACCGATACTTGC GAAATCAACCGCCGAGGCCGCAGGGCTCCACCGATACTTGC < 41bp 0.621419967349643 0.836206033866987 0.70597196 0.8697428 prediction 0.429572133034688 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132781 chr1:161132782 synonymous SNV . 0 22 hm5C_associated_SNPs_122212 0 0 1 PPIG POSTAR2 ENCODE chr1:161132751-161132857
64251 chr16 31214132 31214132 1 + C T rs116026792 31214131 + 31214111 31214151 41 CCCACTCTGGTCTCCCGACTCCCCGCCCCGGTCCGTTGCCC CCCACTCTGGTCTCCCGACTCTCCGCCCCGGTCCGTTGCCC < 41bp 0.595041992239364 0.809824138137968 0.051752657 0.1473785 prediction 0.429564291797208 Functional Gain - PYCARD-AS1 ENSG00000261359 CDS Human antisense chr16:31214131 chr16:31214132 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_122214 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:31214077-31214152
64251 chr9 135926331 135926331 1 + C A UCEC 135926330 + 135926310 135926350 41 GGAGGAGAGTCTGCACTAACCCCGTGGACCGGAAGGTGGAG GGAGGAGAGTCTGCACTAACCACGTGGACCGGAAGGTGGAG < 41bp 0.62882439048034 0.843603568496855 0.36636317 0.67699707 prediction 0.42955835603303 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135926330 chr9:135926331 nonsynonymous SNV 0.151 3 22 hm5C_associated_SNPs_122215 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr9:135926316-135926336
64251 chr4 148555047 148555047 1 + A G LIHC 148555044 + 148555024 148555064 41 TTTCTTGCCATGTGGGATGTCTCAGATATTAGAGATGATAT TTTCTTGCCATGTGGGATGTCTCGGATATTAGAGATGATAT < 41bp 0.532821564283843 0.747598418962323 0.13624021 0.20553648 prediction 0.42955370935696 Functional Gain - TMEM184C ENSG00000164168 CDS Human protein_coding chr4:148555044 chr4:148555047 synonymous SNV . 0 24 hm5C_associated_SNPs_122216 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:148555044-148555069
64251 chr6 144074958 144074958 1 + C A LIHC 144074957 + 144074937 144074977 41 ACCCATCGGAGAGGAATCTACCCGAGAGGAAAATGTAGTAA ACCCATCGGAGAGGAATCTACACGAGAGGAAAATGTAGTAA < 41bp 0.601151621156463 0.815915788148655 0.19713339 0.19301292 prediction 0.429528333984383 Functional Gain - PHACTR2 ENSG00000112419 CDS Human protein_coding chr6:144074957 chr6:144074958 synonymous SNV . 0 22 hm5C_associated_SNPs_122220 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:144074940-144074960
64251 chr17 78022464 78022464 1 + C T rs183808038 78022463 + 78022443 78022483 41 CCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAG CCAGATCCAGCAGCCCAGCACTGAGGAGGGGGCCATGGCAG < 41bp 0.470065671280552 0.714752931256366 0.39387807 0.2939745 prediction 0.429505862512732 Functional Gain - CCDC40 ENSG00000141519 CDS Human protein_coding chr17:78022463 chr17:78022464 synonymous SNV . 0 22 hm5C_associated_SNPs_122226 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr17:78022434-78022467
64251 chr1 162551240 162551240 1 + T C UCEC 162551237 + 162551217 162551257 41 TGCATTCAGAAAGGAGCAGACTGTGGAGCAAAGGTAATGCC TGCATTCAGAAAGGAGCAGACTGCGGAGCAAAGGTAATGCC < 41bp 0.547056011306454 0.761805585875409 0.30225992 0.4780291 prediction 0.42949914913791 Functional Gain - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162551237 chr1:162551240 synonymous SNV . 0 24 hm5C_associated_SNPs_122227 0 0 3 AARS POSTAR2 ENCODE chr1:162551233-162551250
64251 chr1 161719827 161719827 1 + T C LUSC 161719825 + 161719805 161719845 41 GTCGAGGATCTATGGCGCCTCTTCGTGCCAGCGCTGGACAA GTCGAGGATCTATGGCGCCTCTCCGTGCCAGCGCTGGACAA < 41bp 0.616372792940626 0.831116608089084 0.16759059 0.62812793 prediction 0.429487630296915 Functional Gain - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719825 chr1:161719827 nonsynonymous SNV 0.869 2 23 hm5C_associated_SNPs_122230 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:161719803-161719829
64251 chr19 49671234 49671234 1 + T C UCEC 49671232 + 49671212 49671252 41 TTATAGTCTGGTCACACGCACATGGGGCTTCCGTGCCCCGA TTATAGTCTGGTCACACGCACACGGGGCTTCCGTGCCCCGA < 41bp 0.463723168668818 0.714740395166189 0.20782253 0.099488944 prediction 0.429480790332378 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49671232 chr19:49671234 nonsynonymous SNV 0.813 4 23 hm5C_associated_SNPs_122232 0 0 1 DDX24 POSTAR2 ENCODE chr19:49671211-49671347
64251 chr12 119568519 119568519 1 + C A LUSC 119568518 + 119568498 119568538 41 CCCTGAGGAAGGGCAGAAGTCCCGCCGAAGGCACTCCCGCC CCCTGAGGAAGGGCAGAAGTCACGCCGAAGGCACTCCCGCC < 41bp 0.449356824964569 0.714739650289065 0.87998354 0.7852008 prediction 0.42947930057813 Functional Gain - SRRM4 ENSG00000139767 CDS Human protein_coding chr12:119568518 chr12:119568519 synonymous SNV . 0 22 hm5C_associated_SNPs_122233 0 0 1 SRRM4 POSTAR2 GSE57278,GSM1378374 chr12:119568500-119568560
64251 chr1 156594455 156594455 1 + C A LIHC 156594454 + 156594434 156594474 41 CTCGAGGGCTCCGTGCGCTACCCTGTGCTCACCGCACGCGC CTCGAGGGCTCCGTGCGCTACACTGTGCTCACCGCACGCGC < 41bp 0.458908931765639 0.71473036839216 0.020857036 0.017225832 prediction 0.429460736784319 Functional Gain - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594454 chr1:156594455 nonsynonymous SNV 0.919 4 22 hm5C_associated_SNPs_122242 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr1 25870109 25870109 1 + C A rs555107740 25870108 + 25870088 25870128 41 GGGAGGGGAGGAGCGCGCAGCCCGCGCGCCGCAGGGCCGGG GGGAGGGGAGGAGCGCGCAGCACGCGCGCCGCAGGGCCGGG < 41bp 0.553457779047399 0.768183802571204 0.24563885 0.35620975 prediction 0.429452047047611 Functional Gain - LDLRAP1 ENSG00000157978 UTR5 Human protein_coding chr1:25870108 chr1:25870109 . . 0 22 hm5C_associated_SNPs_122244 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr1:25870108-25870109
64251 chr11 73102213 73102213 1 + C T LGG 73102212 + 73102192 73102232 41 GTTTGGGCCTTGGGGGGTTCCCCGCGTTCCATGTCAACCAT GTTTGGGCCTTGGGGGGTTCCTCGCGTTCCATGTCAACCAT < 41bp 0.597616219978883 0.812336859289444 0.40453327 0.22969717 prediction 0.429441278621123 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73102212 chr11:73102213 synonymous SNV . 0 22 hm5C_associated_SNPs_122246 0 0 1 BUD13 POSTAR2 ENCODE chr11:73102180-73102249
64251 chr2 110049080 110049080 1 + C T UCEC 110049079 + 110049059 110049099 41 CAAGGGGGCGTCTCTGAGGACCGGGGTCTCTGGGGTGTTCC CAAGGGGGCGTCTCTGAGGACTGGGGTCTCTGGGGTGTTCC < 41bp 0.484221817169815 0.714719276365243 0.9054847 0.7245589 prediction 0.429438552730486 Functional Gain - SH3RF3 ENSG00000172985 CDS Human protein_coding chr2:110049079 chr2:110049080 synonymous SNV . 0 22 hm5C_associated_SNPs_122248 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr2:110049070-110049083
64251 chr1 57170074 57170074 1 + C T SKCM 57170073 + 57170053 57170093 41 GCCAAGTGGCATCTTGGAATCCGAAGTCAGAGCAAACCGTA GCCAAGTGGCATCTTGGAATCTGAAGTCAGAGCAAACCGTA < 41bp 0.585470856363665 0.800188743141002 0.27368924 0.21888548 prediction 0.429435773554674 Functional Gain - PRKAA2 ENSG00000162409 CDS Human protein_coding chr1:57170073 chr1:57170074 stopgain 0.998 1 22 hm5C_associated_SNPs_122249 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:57170068-57170114
64251 chr17 65732062 65732062 1 + T C UCEC 65732059 + 65732039 65732079 41 GTTTATGCTACATGGAAAATCTCTAACTGTGATTCCATACA GTTTATGCTACATGGAAAATCTCCAACTGTGATTCCATACA < 41bp 0.578799418063652 0.793513392630306 0.8746804 0.95021814 prediction 0.429427949133308 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65732059 chr17:65732062 nonsynonymous SNV 0.611 4 24 hm5C_associated_SNPs_122254 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:65732020-65732080
64251 chr7 5645545 5645545 1 + T A rs73334479 5645541 + 5645521 5645561 41 CCCCCCAGGAGAGCTGGGCACATGTCCCAAGCCTGTCAGTG CCCCCCAGGAGAGCTGGGCACATGACCCAAGCCTGTCAGTG < 41bp 0.417976232120669 0.714706073820822 0.19259897 0.19338006 prediction 0.429412147641645 Functional Gain - FSCN1 ENSG00000075618 UTR3 Human protein_coding chr7:5645541 chr7:5645545 . . 0 25 hm5C_associated_SNPs_122258 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:5645491-5645548
64251 chr15 67486427 67486427 1 + C G rs61740807 67486423 + 67486403 67486443 41 ATACCAGCAGCAAGAGAGTGCACCCGTTTAGCCCTGGACCC ATACCAGCAGCAAGAGAGTGCACCGGTTTAGCCCTGGACCC < 41bp 0.449629874481069 0.714703809356753 0.16389287 0.24488422 prediction 0.429407618713506 Functional Gain - SMAD3 ENSG00000166949 UTR3 Human protein_coding chr15:67486423 chr15:67486427 . . 0 25 hm5C_associated_SNPs_122259 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:67486374-67486445
64251 chr1 196643018 196643018 1 + T A ESCA 196643014 + 196642994 196643034 41 CTGTGGACATCCTGGAGATACTCCTTTTGGTACTTTTACCC CTGTGGACATCCTGGAGATACTCCATTTGGTACTTTTACCC < 41bp 0.358980854744222 0.714693436356476 0.013279557 0.95026267 prediction 0.429386872712952 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196643014 chr1:196643018 synonymous SNV . 0 25 hm5C_associated_SNPs_122262 0 0 4 SF3B4 POSTAR2 ENCODE chr1:196642970-196643019
64251 chr16 57416511 57416511 1 + C T CESC 57416510 + 57416490 57416530 41 TGTGGGGTCAGGGACAGAGCCCCAGGCCAGAGAACTCTCTG TGTGGGGTCAGGGACAGAGCCTCAGGCCAGAGAACTCTCTG < 41bp 0.555545720212781 0.770228140650668 0.24061474 0.26720273 prediction 0.429364840875774 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416510 chr16:57416511 nonsynonymous SNV 0.006 0 22 hm5C_associated_SNPs_122269 0 0 6 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr16:57416506-57416542
64251 chr13 33241943 33241943 1 + A G LIHC 33241940 + 33241920 33241960 41 ATGATTTGGCAAAGGCTTTACTGAAGAGGACAGCTCAAGCT ATGATTTGGCAAAGGCTTTACTGGAGAGGACAGCTCAAGCT < 41bp 0.518815609941355 0.733487180391616 0.10724071 0.24236059 prediction 0.429343140900522 Functional Gain - PDS5B ENSG00000083642 CDS Human protein_coding chr13:33241940 chr13:33241943 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_122270 0 0 2 SF3B4 POSTAR2 ENCODE chr13:33241847-33241956
64251 chr6 96034832 96034832 1 + A G STAD 96034829 + 96034809 96034849 41 ATCCTTCTGTCATAGAAACTCACATGAGACAAATGCGCTCA ATCCTTCTGTCATAGAAACTCACGTGAGACAAATGCGCTCA < 41bp 0.516734275352124 0.731394412035723 0.19153172 0.36305958 prediction 0.429320273367196 Functional Gain - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034829 chr6:96034832 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_122274 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:96034823-96034850
64251 chr5 34823475 34823475 1 + C A COAD 34823471 + 34823451 34823491 41 GTGCAGAAGCAGATGAAACTCGGTCTTGTCTCACCTGAAAG GTGCAGAAGCAGATGAAACTCGGTATTGTCTCACCTGAAAG < 41bp 0.301901340913668 0.714658224161486 0.8005744 0.7807661 prediction 0.429316448322971 Functional Gain - RAI14 ENSG00000039560 CDS Human protein_coding chr5:34823471 chr5:34823475 nonsynonymous SNV 0.511 2 25 hm5C_associated_SNPs_122275 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr5:34823467-34823484
64251 chr11 67163640 67163640 1 + C G BLCA 67163639 + 67163619 67163659 41 TTAGCATTCATTTTGATGCTCCAGGCAGGTAGTTCCCAGCC TTAGCATTCATTTTGATGCTCGAGGCAGGTAGTTCCCAGCC < 41bp 0.384506060808799 0.714653407742946 0.19907841 0.56799555 prediction 0.429306815485892 Functional Gain - RAD9A ENSG00000172613 CDS Human protein_coding chr11:67163639 chr11:67163640 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_122280 0 0 1 PRPF8 POSTAR2 ENCODE chr11:67163636-67163681
64251 chr12 6634767 6634767 1 + A G CESC 6634764 + 6634744 6634784 41 TTTAGCTCTGTGAGTTTGTGCAGAAGGATGAGTTGAAACCA TTTAGCTCTGTGAGTTTGTGCAGGAGGATGAGTTGAAACCA < 41bp 0.593050180659453 0.807699242586012 0.45648137 0.8746688 prediction 0.429298123853118 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6634764 chr12:6634767 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_122282 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:6634746-6634774
64251 chr20 60861650 60861650 1 + C T PAAD 60861649 + 60861629 60861669 41 TGTGTTTCAGGATGAAGACTCCGGGAAGGCTGACAGCGACG TGTGTTTCAGGATGAAGACTCTGGGAAGGCTGACAGCGACG < 41bp 0.553604978507357 0.768252310159223 0.42525768 0.407819 prediction 0.429294663303732 Functional Gain - OSBPL2 ENSG00000130703 CDS Human protein_coding chr20:60861649 chr20:60861650 synonymous SNV . 0 22 hm5C_associated_SNPs_122283 0 0 1 RBM5 POSTAR2 ENCODE chr20:60861576-60861681
64251 chr19 42729154 42729154 1 + C A UCEC 42729153 + 42729133 42729173 41 AGATGGAGCCCTATGAGTGTCCTGAGTGCTCTACCCTCTGC AGATGGAGCCCTATGAGTGTCATGAGTGCTCTACCCTCTGC < 41bp 0.611801252226112 0.826440187712505 0.33356878 0.72236925 prediction 0.429277870972786 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729153 chr19:42729154 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_122285 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:42729140-42729185
64251 chr14 21461280 21461280 1 + C T UCEC 21461279 + 21461259 21461299 41 TGTTGTATATTTCTTCAGATCCGGGCTCGAAATCCAGCATT TGTTGTATATTTCTTCAGATCTGGGCTCGAAATCCAGCATT < 41bp 0.564629605335363 0.779266741003454 0.7617363 0.29682782 prediction 0.429274271336183 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21461279 chr14:21461280 nonsynonymous SNV 0.916 2 22 hm5C_associated_SNPs_122286 0 0 23 U2AF2 POSTAR2 GSE83923,CSM2221657 chr14:21461260-21461280
64251 chr10 75519884 75519884 1 + C A UCEC 75519883 + 75519863 75519903 41 TTAGCCAGGCCCAAGGTCATCCTGGGATCCAGACTCCCCAG TTAGCCAGGCCCAAGGTCATCATGGGATCCAGACTCCCCAG < 41bp 0.610687772828026 0.825321020600051 0.26241964 0.8427701 prediction 0.42926649554405 Functional Gain - SEC24C ENSG00000176986 CDS Human protein_coding chr10:75519883 chr10:75519884 nonsynonymous SNV 0.960 3 22 hm5C_associated_SNPs_122288 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr10:75519880-75519905
64251 chr2 74757769 74757769 1 + C T SKCM 74757768 + 74757748 74757788 41 CCTTTCTTGGGCCGCGAGGTCCCTATCTCGAACGGCTCAGG CCTTTCTTGGGCCGCGAGGTCTCTATCTCGAACGGCTCAGG < 41bp 0.445225237567117 0.714610857754522 0.04124418 0.3568511 prediction 0.429221715509045 Functional Gain - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757768 chr2:74757769 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_122295 0 0 2 BUD13 POSTAR2 ENCODE chr2:74757739-74757790
64251 chr2 65299226 65299226 1 + C T rs140989801 65299225 + 65299205 65299245 41 TGACCCTGTCCTGCAGGACTCCGGGGTAGACCTGGATAGCT TGACCCTGTCCTGCAGGACTCTGGGGTAGACCTGGATAGCT < 41bp 0.590249024841937 0.80485966950232 0.94842064 0.91586363 prediction 0.429221289320765 Functional Gain - CEP68 ENSG00000011523 CDS Human protein_coding chr2:65299225 chr2:65299226 synonymous SNV . 0 22 hm5C_associated_SNPs_122296 0 0 1 RBM15 POSTAR2 ENCODE chr2:65299193-65299231
64251 chr7 66103872 66103872 1 + C T UCEC 66103871 + 66103851 66103891 41 GAGCGGATTGTGGAGATCGCCCGGCTGCGTGCGGTCCAGCG GAGCGGATTGTGGAGATCGCCTGGCTGCGTGCGGTCCAGCG < 41bp 0.553138195785023 0.767741805625205 0.35809767 0.34451503 prediction 0.429207219680364 Functional Gain - KCTD7 ENSG00000243335 CDS Human protein_coding chr7:66103871 chr7:66103872 nonsynonymous SNV 0.981 2 22 hm5C_associated_SNPs_122300 0 0 4 DDX24 POSTAR2 ENCODE chr7:66103858-66103903
64251 chr6 90572199 90572199 1 + A G rs116832209 90572196 + 90572176 90572216 41 ATTAGACATAGCCAGTTTAACAGAGGAACTGAAAGAGTACG ATTAGACATAGCCAGTTTAACAGGGGAACTGAAAGAGTACG < 41bp 0.499606211411234 0.714598006173342 0.91473675 0.9262121 prediction 0.429196012346683 Functional Gain - CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90572196 chr6:90572199 . . 0 24 hm5C_associated_SNPs_122301 0 0 3 EWSR1 POSTAR2 SRX029344 chr6:90572173-90572206
64251 chr8 48878917 48878917 1 + C T SKCM 48878916 + 48878896 48878936 41 TGCGGGCGCTGCCACACCACCCACAGCATGGCACTCATCCA TGCGGGCGCTGCCACACCACCTACAGCATGGCACTCATCCA < 41bp 0.436836163932294 0.714594225211001 0.012917459 0.071217775 prediction 0.429188450422002 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878916 chr8:48878917 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_122302 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:48878889-48878918
64251 chr19 42795131 42795131 1 + C A OV 42795127 + 42795107 42795147 41 TTCGGACAAGAAGTCGGCAGCAGCCACCTCACCAGCCCCAC TTCGGACAAGAAGTCGGCAGCAGCAACCTCACCAGCCCCAC < 41bp 0.298688782873689 0.714593232408069 0.29070604 0.19751713 prediction 0.429186464816139 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42795127 chr19:42795131 synonymous SNV . 0 25 hm5C_associated_SNPs_122304 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:42795095-42795133
64251 chr15 39874481 39874481 1 + C T SKCM 39874480 + 39874460 39874500 41 GGCGCCGACTGGTGAAGGGCCCCGACCCTTCCAGCCCAGCT GGCGCCGACTGGTGAAGGGCCTCGACCCTTCCAGCCCAGCT < 41bp 0.612732458894038 0.827316875123468 0.03400895 0.039249063 prediction 0.42916883245886 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39874480 chr15:39874481 nonsynonymous SNV 0.057 0 22 hm5C_associated_SNPs_122307 0 0 1 RPS3 POSTAR2 ENCODE chr15:39874419-39874487
64251 chr3 40529172 40529172 1 + C A LUAD 40529171 + 40529151 40529191 41 AGTTCGGTATTTCTTCAGCACCAGAGGTTCCACACTGGGGA AGTTCGGTATTTCTTCAGCACAAGAGGTTCCACACTGGGGA < 41bp 0.447585559448911 0.714584138248609 0.5170957 0.4178028 prediction 0.429168276497218 Functional Gain - ZNF619 ENSG00000177873 CDS Human protein_coding chr3:40529171 chr3:40529172 nonsynonymous SNV 0.805 0 22 hm5C_associated_SNPs_122308 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr3:40529160-40529180
64251 chr6 139164210 139164210 1 + T C rs76700722 139164208 + 139164188 139164228 41 GGTGCTTGGAAGCGCCATTACATTGCTTGTGTGTCCCACTT GGTGCTTGGAAGCGCCATTACACTGCTTGTGTGTCCCACTT < 41bp 0.425732440425265 0.714576993607197 0.023938507 0.018608928 prediction 0.429153987214393 Functional Gain - ECT2L ENSG00000203734 CDS Human protein_coding chr6:139164208 chr6:139164210 nonsynonymous SNV 0.972 1 23 hm5C_associated_SNPs_122310 1 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr6:139164178-139164210
64251 chr7 148876070 148876070 1 + C A BRCA 148876066 + 148876046 148876086 41 AATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAG AATGTAGCCATGCTACTGAGCACCACTTACCCTGTGCCCAG < 41bp 0.299590608878827 0.714574073151722 0.07191345 0.090696394 prediction 0.429148146303444 Functional Gain - ZNF398 ENSG00000197024 CDS Human protein_coding chr7:148876066 chr7:148876070 nonsynonymous SNV 0.567 1 25 hm5C_associated_SNPs_122312 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr7:148876040-148876080
64251 chr14 105958492 105958492 1 + C T STAD 105958491 + 105958471 105958511 41 CACTATGCTCCCAGGGCTACCCGAGGCTGGCACTGGCACAA CACTATGCTCCCAGGGCTACCTGAGGCTGGCACTGGCACAA < 41bp 0.544440687515251 0.759008351445346 0.8961085 0.67623657 prediction 0.429135327860189 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105958491 chr14:105958492 stopgain 0.152 2 22 hm5C_associated_SNPs_122317 0 0 2 EFTUD2 POSTAR2 ENCODE chr14:105958436-105958495
64251 chr9 35809175 35809175 1 + T C UCEC 35809172 + 35809152 35809192 41 GCGCTGAAGATCCATGTCTCCTCTACCACCAAGGATGCCCT GCGCTGAAGATCCATGTCTCCTCCACCACCAAGGATGCCCT < 41bp 0.489673110330488 0.714556258412816 0.44753966 0.733061 prediction 0.429112516825632 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35809172 chr9:35809175 synonymous SNV . 0 24 hm5C_associated_SNPs_122322 0 0 1 WDR33 POSTAR2 GSE61123,GSM1496985 chr9:35809172-35809194
64251 chr15 100211568 100211568 1 + A G COAD 100211565 + 100211545 100211585 41 CCTTAATGGTTGTGAGAGCCCTGATGCTGACGATTACTTTG CCTTAATGGTTGTGAGAGCCCTGGTGCTGACGATTACTTTG < 41bp 0.541732235226914 0.756285123069635 0.19222462 0.3035997 prediction 0.429105775685441 Functional Gain - MEF2A ENSG00000068305 CDS Human protein_coding chr15:100211565 chr15:100211568 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_122324 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr15:100211547-100211577
64251 chr8 145746374 145746374 1 + A G STAD 145746371 + 145746351 145746391 41 AGGACCTACGCTTCCTGGCACGGAGCCCACATGCTGCCCAC AGGACCTACGCTTCCTGGCACGGGGCCCACATGCTGCCCAC < 41bp 0.599693310366931 0.81424330665054 0.63615155 0.9215249 prediction 0.429099992567218 Functional Gain - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145746371 chr8:145746374 nonsynonymous SNV 0.111 4 24 hm5C_associated_SNPs_122325 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr8:145746360-145746380
64251 chr7 128496629 128496629 1 + C T LUAD 128496628 + 128496608 128496648 41 GCCGTGCAGCTGAACGGTGCCCGGGGCGTGATTGATGCCCG GCCGTGCAGCTGAACGGTGCCTGGGGCGTGATTGATGCCCG < 41bp 0.488313712163902 0.714548019682475 0.61261344 0.8218261 prediction 0.429096039364951 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128496628 chr7:128496629 nonsynonymous SNV 0.015 5 22 hm5C_associated_SNPs_122327 0 0 1 AGGF1 POSTAR2 ENCODE chr7:128496604-128496633
64251 chr18 48256093 48256093 1 + C T COAD 48256092 + 48256072 48256112 41 GACCTGGACGTGTTCATCTCCCGCGCCCTGAAGCTCTGCAC GACCTGGACGTGTTCATCTCCTGCGCCCTGAAGCTCTGCAC < 41bp 0.469321530673586 0.714541236362309 0.06510675 0.057938516 prediction 0.429082472724618 Functional Gain - MAPK4 ENSG00000141639 CDS Human protein_coding chr18:48256092 chr18:48256093 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_122330 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:48256083-48256142
64251 chr9 135919202 135919202 1 + C T SKCM 135919201 + 135919181 135919221 41 ACAAGGTGCTCATGCTCCGGCCCGAGAAGGAGGCCTTTTTC ACAAGGTGCTCATGCTCCGGCTCGAGAAGGAGGCCTTTTTC < 41bp 0.632214916969305 0.846751610578722 0.49348307 0.49849012 prediction 0.429073387218832 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919201 chr9:135919202 nonsynonymous SNV 0.444 0 22 hm5C_associated_SNPs_122332 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:135919176-135919206
64251 chr16 2577863 2577863 1 + C T BLCA 2577862 + 2577842 2577882 41 TCCTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCACCTA TCCTTCGAGGCCGATGCCTTCTAGGACTTGCTGGCCACCTA < 41bp 0.589500890351042 0.804033631303891 0.79219997 0.73394114 prediction 0.429065481905698 Functional Gain - AMDHD2 ENSG00000162066;ENSG00000259784 CDS Human other chr16:2577862 chr16:2577863 stopgain 0.571 0 22 hm5C_associated_SNPs_122334 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2577854-2577885
64251 chr2 220044464 220044464 1 + C T SKCM 220044463 + 220044443 220044483 41 CTCTCTCTCTAGCATCATCCCCAGAGGAGCCACACTCTGAC CTCTCTCTCTAGCATCATCCCTAGAGGAGCCACACTCTGAC < 41bp 0.62149890691228 0.836026330360992 0.4550883 0.19008765 prediction 0.429054846897424 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220044463 chr2:220044464 nonsynonymous SNV 0.879 1 22 hm5C_associated_SNPs_122337 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:220044454-220044481
64251 chr16 28841265 28841265 1 + C A UCEC 28841264 + 28841244 28841284 41 CTCGAGAGATTGAATCAAGCCCCCAGTACCGCCTACGGATC CTCGAGAGATTGAATCAAGCCACCAGTACCGCCTACGGATC < 41bp 0.602308848629451 0.816834312704369 0.054626465 0.036655158 prediction 0.429050928149836 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28841264 chr16:28841265 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_122338 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:28841240-28841276
64251 chr4 69978285 69978285 1 + A G UCEC 69978282 + 69978262 69978302 41 TGTCATGCGCCACAAAGGAGCTAAACACCTTCGGGTTGCAG TGTCATGCGCCACAAAGGAGCTAGACACCTTCGGGTTGCAG < 41bp 0.560868272065259 0.775389121225151 0.3410709 0.13842854 prediction 0.429041698319783 Functional Gain - UGT2B7 ENSG00000171234 CDS Human protein_coding chr4:69978282 chr4:69978285 nonsynonymous SNV 0.634 1 24 hm5C_associated_SNPs_122342 0 0 2 SND1 POSTAR2 ENCODE chr4:69978262-69978312
64251 chr4 3446682 3446682 1 + C T rs144021102 3446681 + 3446661 3446701 41 GCACGTGGACTCCGTGGGCGCCGCGGCCCTGCTGGGCCTGG GCACGTGGACTCCGTGGGCGCTGCGGCCCTGCTGGGCCTGG < 41bp 0.535533257012251 0.750048927327779 0.6490726 0.36508197 prediction 0.429031340631056 Functional Gain - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3446681 chr4:3446682 synonymous SNV . 0 22 hm5C_associated_SNPs_122345 0 0 4 PPIG POSTAR2 ENCODE chr4:3446653-3446702
64251 chr2 113940666 113940666 1 + A G COAD 113940663 + 113940643 113940683 41 AGCCCACCTGAGAATGAAGACTCAGGGGAAGACAGCAGTGA AGCCCACCTGAGAATGAAGACTCGGGGGAAGACAGCAGTGA < 41bp 0.53156752109259 0.746082619222848 0.019321948 0.045314014 prediction 0.429030196260517 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940663 chr2:113940666 synonymous SNV . 0 24 hm5C_associated_SNPs_122346 0 0 1 UCHL5 POSTAR2 ENCODE chr2:113940613-113940696
64251 chr20 48565822 48565822 1 + C A THCA 48565821 + 48565801 48565841 41 CCTCGATGCCCTGGGGAGACCCCAACTACCGCAGCGCCAAC CCTCGATGCCCTGGGGAGACCACAACTACCGCAGCGCCAAC < 41bp 0.613263895806735 0.827770762903764 0.34456116 0.3508347 prediction 0.429013734194058 Functional Gain - RNF114 ENSG00000124226 CDS Human protein_coding chr20:48565821 chr20:48565822 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_122349 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:48565784-48565838
64251 chr19 17387324 17387324 1 + C T STAD 17387323 + 17387303 17387343 41 GCCAGCAGAAAACTGAGCTTCCGGTCACAGAGAACGTGCAG GCCAGCAGAAAACTGAGCTTCTGGTCACAGAGAACGTGCAG < 41bp 0.557025480348174 0.771532191567149 0.22952244 0.1880669 prediction 0.429013422437951 Functional Gain - BABAM1 ENSG00000105393;ENSG00000269307 CDS Human other chr19:17387323 chr19:17387324 nonsynonymous SNV 0.918 4 22 hm5C_associated_SNPs_122350 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:17387309-17387337
64251 chr19 7677011 7677011 1 + C T UCEC 7677010 + 7676990 7677030 41 ATCGAAACCGCCAGCCCCATCCGAGGGGTCCCCGAAGGCGG ATCGAAACCGCCAGCCCCATCTGAGGGGTCCCCGAAGGCGG < 41bp 0.47267332224365 0.71449407531765 0.87491417 0.23751926 prediction 0.428988150635301 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7677010 chr19:7677011 synonymous SNV . 0 22 hm5C_associated_SNPs_122354 0 0 1 GRWD1 POSTAR2 ENCODE chr19:7676950-7677028
64251 chr1 22413318 22413318 1 + C A OV 22413317 + 22413297 22413337 41 GCTGAAAAGCTGGCCCGTGACCTGAAGGCTGTCAAGTATGT GCTGAAAAGCTGGCCCGTGACATGAAGGCTGTCAAGTATGT < 41bp 0.581861093834601 0.796352707524845 0.30275643 0.296326 prediction 0.428983227380489 Functional Gain - CDC42 ENSG00000070831 CDS Human protein_coding chr1:22413317 chr1:22413318 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_122357 0 0 6 FXR2 POSTAR2 ENCODE chr1:22413307-22413356
64251 chr19 55857907 55857907 1 + C T COAD 55857906 + 55857886 55857926 41 CCGAACCAGGCCTAGGGAGCCCGCGTTGCCACCACGGCCCC CCGAACCAGGCCTAGGGAGCCTGCGTTGCCACCACGGCCCC < 41bp 0.594489239708827 0.808976234603132 0.34175968 0.2307393 prediction 0.42897398978861 Functional Gain - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857906 chr19:55857907 synonymous SNV . 0 22 hm5C_associated_SNPs_122358 0 0 4 BUD13 POSTAR2 ENCODE chr19:55857867-55857972
64251 chr1 32694780 32694780 1 + C A UCS 32694776 + 32694756 32694796 41 GGAAGCCATGGATGTAACCACAACCTCCACCAGGATTGGCA GGAAGCCATGGATGTAACCACAACATCCACCAGGATTGGCA < 41bp 0.28712805114351 0.714485079487798 0.22003627 0.31273282 prediction 0.428970158975597 Functional Gain - EIF3I ENSG00000084623 CDS Human protein_coding chr1:32694776 chr1:32694780 synonymous SNV . 0 25 hm5C_associated_SNPs_122360 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:32694736-32694790
64251 chr2 132021521 132021521 1 + C G LUAD 132021517 + 132021497 132021537 41 GTTTGAGACCTTCAACACCCCAGCCATGTACGTGGCCATCC GTTTGAGACCTTCAACACCCCAGCGATGTACGTGGCCATCC < 41bp 0.41876623751121 0.714483782605779 0.07717484 0.13423288 prediction 0.428967565211559 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:132021517 chr2:132021521 synonymous SNV . 0 25 hm5C_associated_SNPs_122361 0 0 5 MTPAP POSTAR2 ENCODE chr2:132021489-132021573
64251 chr10 27456128 27456128 1 + T C COAD 27456125 + 27456105 27456145 41 AGGCTGGCCACATCCAGTGCCAGTAGTCAATCCCACACCTT AGGCTGGCCACATCCAGTGCCAGCAGTCAATCCCACACCTT < 41bp 0.526703643053084 0.741181310118972 0.18501699 0.30917126 prediction 0.428955334131775 Functional Gain - MASTL ENSG00000120539 CDS Human protein_coding chr10:27456125 chr10:27456128 synonymous SNV . 0 24 hm5C_associated_SNPs_122363 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:27456119-27456145
64251 chr20 35807534 35807534 1 + T C rs563329951 35807532 + 35807512 35807552 41 CGGGGGAGAGGCGGGTCTGTCCTCGGGAACTGCAAGGCCCT CGGGGGAGAGGCGGGTCTGTCCCCGGGAACTGCAAGGCCCT < 41bp 0.494069197766793 0.714476763031151 0.33437234 0.4598722 prediction 0.428953526062301 Functional Gain - RPN2 ENSG00000118705 UTR5 Human protein_coding chr20:35807532 chr20:35807534 . . 0 23 hm5C_associated_SNPs_122365 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819211 chr20:35807520-35807540
64251 chr14 50088296 50088296 1 + C A COAD 50088295 + 50088275 50088315 41 CAGCTGAACTTTGATCAGACCCTGAGGAATGTAGATAAGGC CAGCTGAACTTTGATCAGACCATGAGGAATGTAGATAAGGC < 41bp 0.458074150793105 0.714475073924999 0.20914775 0.30961514 prediction 0.428950147849998 Functional Gain - MGAT2 ENSG00000168282 CDS Human protein_coding chr14:50088295 chr14:50088296 nonsynonymous SNV 0.966 3 22 hm5C_associated_SNPs_122367 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr14:50088212-50088304
64251 chr14 105964989 105964989 1 + C T UCEC 105964988 + 105964968 105965008 41 ACGGGGGCCAGAGTGGAGTGCCGCGCGGCGGGCCTCTCGGG ACGGGGGCCAGAGTGGAGTGCTGCGCGGCGGGCCTCTCGGG < 41bp 0.493850870930003 0.714466392192592 0.32707608 0.36404192 prediction 0.428932784385183 Functional Gain - C14orf80 ENSG00000185347 CDS Human protein_coding chr14:105964988 chr14:105964989 synonymous SNV . 0 22 hm5C_associated_SNPs_122370 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:105964967-105965006
64251 chr3 136646888 136646888 1 + C G BLCA 136646887 + 136646867 136646907 41 AGCCAAATTTGATTATGTGGCCCAACAAGAACAAGAGTTGG AGCCAAATTTGATTATGTGGCGCAACAAGAACAAGAGTTGG < 41bp 0.409930355279193 0.714459024584241 0.039410263 0.08722144 prediction 0.428918049168481 Functional Gain - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136646887 chr3:136646888 synonymous SNV . 0 22 hm5C_associated_SNPs_122372 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:136646882-136646892
64251 chr20 5843918 5843918 1 + C T rs74824950 5843917 + 5843897 5843937 41 GAGAGCCAAAAGTATGCCCTCCGCAGTTTTCAAATGGCCCG GAGAGCCAAAAGTATGCCCTCTGCAGTTTTCAAATGGCCCG < 41bp 0.605735375402664 0.820193400000331 0.08071822 0.32025927 prediction 0.428916049195335 Functional Gain - C20orf196 ENSG00000171984 CDS Human protein_coding chr20:5843917 chr20:5843918 nonsynonymous SNV 0.904 4 22 hm5C_associated_SNPs_122373 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:5843892-5843922
64251 chr1 146649886 146649886 1 + C T SKCM 146649885 + 146649865 146649905 41 GACACTGCAAGAGACTTGCTCCTGAGTATGAAGCTGCAGCT GACACTGCAAGAGACTTGCTCTTGAGTATGAAGCTGCAGCT < 41bp 0.55854712748689 0.772989488606998 0.1686261 0.056500047 prediction 0.428884722240216 Functional Gain - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146649885 chr1:146649886 . . 0 22 hm5C_associated_SNPs_122379 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704216 chr1:146649873-146649894
64251 chr19 45165911 45165911 1 + C T rs377316675 45165910 + 45165890 45165930 41 ACCCAGAGTGGCCCAAGACTCCCAGATCAGCTACCAGGCAG ACCCAGAGTGGCCCAAGACTCTCAGATCAGCTACCAGGCAG < 41bp 0.514063662974768 0.728505284260046 0.1785098 0.15652338 prediction 0.428883242570556 Functional Gain - PVR ENSG00000266903 ncRNA_intronic Human antisense chr19:45165910 chr19:45165911 . . 0 22 hm5C_associated_SNPs_122380 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:45165895-45165931
64251 chr16 27363900 27363900 1 + C T HNSC 27363899 + 27363879 27363919 41 ACCTACCTAGAACCCTCCCTCCGCATCGCAGCCAGCACCCT ACCTACCTAGAACCCTCCCTCTGCATCGCAGCCAGCACCCT < 41bp 0.442739882430915 0.714435961192735 0.054354727 0.1306349 prediction 0.428871922385469 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27363899 chr16:27363900 nonsynonymous SNV 0.002 2 22 hm5C_associated_SNPs_122387 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:27363862-27363900
64251 chr6 26205023 26205023 1 + A G LUSC 26205020 + 26205000 26205040 41 GTGTCAAGCGCATTTCTGGTCTCATCTACGAGGAGACTCGC GTGTCAAGCGCATTTCTGGTCTCGTCTACGAGGAGACTCGC < 41bp 0.557485585563432 0.771920255019353 0.31786215 0.3601207 prediction 0.428869338911842 Functional Gain - HIST1H4E ENSG00000198518 CDS Human other chr6:26205020 chr6:26205023 nonsynonymous SNV 0.018 0 24 hm5C_associated_SNPs_122389 0 0 50 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:26204840-26205100
64251 chr11 32999464 32999464 1 + C A rs560067042 32999460 + 32999440 32999480 41 TGCTCAATGCCCAAATAAGACACGCGGATATTGCTATTGTC TGCTCAATGCCCAAATAAGACACGAGGATATTGCTATTGTC < 41bp 0.326909907951021 0.714433979828862 0.19391015 0.21632299 prediction 0.428867959657725 Functional Gain - QSER1 ENSG00000060749 UTR3 Human protein_coding chr11:32999460 chr11:32999464 . . 0 25 hm5C_associated_SNPs_122390 0 0 8 MOV10 POSTAR2 GSE37524,GSM921128 chr11:32999435-32999478
64251 chr1 161681069 161681069 1 + T G UCEC 161681067 + 161681047 161681087 41 GCTGGTTCTGCGCTGCCAGGCCTGGCAAGACTGGCCACTGA GCTGGTTCTGCGCTGCCAGGCCGGGCAAGACTGGCCACTGA < 41bp 0.394593604840031 0.714428315734469 0.21419835 0.6824566 prediction 0.428856631468939 Functional Gain - FCRLA ENSG00000132185 CDS Human protein_coding chr1:161681067 chr1:161681069 nonsynonymous SNV 0.985 3 23 hm5C_associated_SNPs_122391 0 0 1 SND1 POSTAR2 ENCODE chr1:161681001-161681146
64251 chr19 18703013 18703013 1 + C A rs199575264 18703012 + 18702992 18703032 41 GGCGGCTCCCCAGGGATGCGCCGAGGGAGATGGGAAACGGG GGCGGCTCCCCAGGGATGCGCAGAGGGAGATGGGAAACGGG < 41bp 0.56720540041104 0.781626320174002 0.81014794 0.8878969 prediction 0.428841839525924 Functional Gain - C19orf60 ENSG00000006015 UTR3 Human protein_coding chr19:18703012 chr19:18703013 . . 0 22 hm5C_associated_SNPs_122397 0 0 9 DDX55 POSTAR2 ENCODE chr19:18702960-18703022
64251 chr19 50017183 50017183 1 + C G THCA 50017179 + 50017159 50017199 41 TACCACCTTACCGCGGTGTCCTCGCCTGCCCCGGGGACTCC TACCACCTTACCGCGGTGTCCTCGGCTGCCCCGGGGACTCC < 41bp 0.58364358679432 0.798060330772963 0.27153754 0.7698655 prediction 0.428833487957286 Functional Gain - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50017179 chr19:50017183 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_122400 0 0 5 DDX3X POSTAR2 ENCODE chr19:50017155-50017239
64251 chr20 43545420 43545420 1 + C T STAD 43545419 + 43545399 43545439 41 GGCGTGTGACGAGCATGGCTCCCGGGGTTTCGGCTTTGTCC GGCGTGTGACGAGCATGGCTCTCGGGGTTTCGGCTTTGTCC < 41bp 0.482268149798055 0.71441313910858 0.89965844 0.28397942 prediction 0.428826278217159 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43545419 chr20:43545420 synonymous SNV . 0 22 hm5C_associated_SNPs_122401 0 0 4 PPIG POSTAR2 ENCODE chr20:43545396-43545432
64251 chr1 203014682 203014682 1 + C T OV 203014681 + 203014661 203014701 41 AGCAAGCATCAGCGGGACCTCCGGGAGGTGCGTGAGGGCGC AGCAAGCATCAGCGGGACCTCTGGGAGGTGCGTGAGGGCGC < 41bp 0.572754475950176 0.787164110395059 0.517225 0.4161027 prediction 0.428819268889767 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203014681 chr1:203014682 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_122402 0 0 1 UCHL5 POSTAR2 ENCODE chr1:203014639-203014687
64251 chr17 36288233 36288233 1 + C T COAD 36288232 + 36288212 36288252 41 AAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGT AAGGGAATGCCCATGAACATCTGGGGCCCGATGTGGTCAGT < 41bp 0.583069569915636 0.797477505389682 0.86205703 0.6576364 prediction 0.42881587094809 Functional Gain - TBC1D3;TBC1D3C;TBC1D3D;TBC1D3E;TBC1D3F;TBC1D3G;TBC1D3H;TBC1D3I;TBC1D3K;TBC1D3L ENSG00000185128 CDS Human other chr17:36288232 chr17:36288233 nonsynonymous SNV 0.020 1 22 hm5C_associated_SNPs_122403 0 0 1 SRSF1 POSTAR2 GSE83923,GSM2221668 chr17:36288220-36288240
64251 chr16 29856130 29856130 1 + C T LUAD 29856129 + 29856109 29856149 41 GAGCCTGTGGATCAGAGGACCCGGGACGCCCTGCAACGCAG GAGCCTGTGGATCAGAGGACCTGGGACGCCCTGCAACGCAG < 41bp 0.585976256289346 0.800380984946248 0.88811225 0.90874374 prediction 0.428809457313804 Functional Gain - MVP ENSG00000013364 CDS Human protein_coding chr16:29856129 chr16:29856130 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_122405 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29856111-29856136
64251 chr16 72142375 72142375 1 + C T UCEC 72142374 + 72142354 72142394 41 CTCCGTCTCCTGCCCTAGGTCCGGGAGGTGCGAGCTCAACT CTCCGTCTCCTGCCCTAGGTCTGGGAGGTGCGAGCTCAACT < 41bp 0.601257812143393 0.815658085671171 0.845819 0.46893102 prediction 0.428800547055557 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142374 chr16:72142375 nonsynonymous SNV 0.901 4 22 hm5C_associated_SNPs_122409 0 0 11 BUD13 POSTAR2 ENCODE chr16:72142323-72142396
64251 chr17 4700088 4700088 1 + T A rs11552523 4700084 + 4700064 4700104 41 GGGGGCGGACTCCAGAACAACCACTGGGTGAGCTCAGGACA GGGGGCGGACTCCAGAACAACCACAGGGTGAGCTCAGGACA < 41bp 0.370234897596898 0.714389070405928 0.2921091 0.33612305 prediction 0.428778140811855 Functional Gain - PSMB6 ENSG00000142507 CDS Human protein_coding chr17:4700084 chr17:4700088 synonymous SNV . 0 25 hm5C_associated_SNPs_122412 0 0 3 DDX3X POSTAR2 ENCODE chr17:4700037-4700088
64251 chr11 75501774 75501774 1 + C T SKCM 75501773 + 75501753 75501793 41 TTTCGAGACTACTTTCCCATCCAGGTAAAGTGCTGTGAGTG TTTCGAGACTACTTTCCCATCTAGGTAAAGTGCTGTGAGTG < 41bp 0.459491270033655 0.714372786652443 0.8965169 0.40654173 prediction 0.428745573304886 Functional Gain - DGAT2 ENSG00000062282 CDS Human protein_coding chr11:75501773 chr11:75501774 stopgain 0.998 1 22 hm5C_associated_SNPs_122420 0 0 1 PRPF8 POSTAR2 ENCODE chr11:75501762-75501826
64251 chr21 42710379 42710379 1 + A G HNSC 42710376 + 42710356 42710396 41 ACACCTATGCCTACAGGTTACTCAGCGGAGGTGGCAGAAGC ACACCTATGCCTACAGGTTACTCGGCGGAGGTGGCAGAAGC < 41bp 0.569596078074899 0.783962271641775 0.15752062 0.52220947 prediction 0.428732387133753 Functional Gain - FAM3B ENSG00000183844 CDS Human protein_coding chr21:42710376 chr21:42710379 nonsynonymous SNV 0.654 4 24 hm5C_associated_SNPs_122423 0 0 5 GRWD1 POSTAR2 ENCODE chr21:42710342-42710495
64251 chr6 160218358 160218358 1 + T C LUSC 160218356 + 160218336 160218376 41 CTCAGCATCATGTAGAAGCACTTGTGGAGCATCAGAATGGC CTCAGCATCATGTAGAAGCACTCGTGGAGCATCAGAATGGC < 41bp 0.433165753590632 0.71436580039856 0.06352419 0.049390227 prediction 0.428731600797121 Functional Gain - MRPL18 ENSG00000112110 CDS Human protein_coding chr6:160218356 chr6:160218358 synonymous SNV . 0 23 hm5C_associated_SNPs_122425 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:160218320-160218360
64251 chr11 64785942 64785942 1 + C T SKCM 64785941 + 64785921 64785961 41 AACATCAAGACCCTGGAGCACCGAGGGTGAGCAGGGGCCCC AACATCAAGACCCTGGAGCACTGAGGGTGAGCAGGGGCCCC < 41bp 0.519916287670249 0.734281389605571 0.3165986 0.11716023 prediction 0.428730203870644 Functional Gain - ARL2 ENSG00000213465;ENSG00000273003 CDS Human other chr11:64785941 chr11:64785942 stopgain 0.998 0 22 hm5C_associated_SNPs_122427 0 0 1 YBX3 POSTAR2 ENCODE chr11:64785842-64785946
64251 chr9 127965332 127965332 1 + A G STAD 127965329 + 127965309 127965349 41 TCTTGGAACCTGGAGACAAGCCCAGGAAAGCAACATGGTCT TCTTGGAACCTGGAGACAAGCCCGGGAAAGCAACATGGTCT < 41bp 0.566759893891177 0.781109288199614 0.056125104 0.06812209 prediction 0.428698788616874 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127965329 chr9:127965332 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_122431 0 0 3 BUD13 POSTAR2 ENCODE chr9:127965255-127965362
64251 chr5 179250960 179250960 1 + T C UCEC 179250957 + 179250937 179250977 41 CTGCGATGGCTGCAATGGGCCTGTGGTAGGAACCCGCTACA CTGCGATGGCTGCAATGGGCCTGCGGTAGGAACCCGCTACA < 41bp 0.495708219817602 0.714348744063406 0.1262216 0.3182812 prediction 0.428697488126812 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179250957 chr5:179250960 nonsynonymous SNV 0.946 5 24 hm5C_associated_SNPs_122432 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:179250905-179250961
64251 chr14 95030105 95030105 1 + C A HNSC 95030101 + 95030081 95030121 41 ATGCTTTCCCTGGGGGCCTGCTCACACAGCCGCAGCCAGAT ATGCTTTCCCTGGGGGCCTGCTCAAACAGCCGCAGCCAGAT < 41bp 0.280647829991138 0.714327098682015 0.09493768 0.7063723 prediction 0.42865419736403 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95030101 chr14:95030105 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_122443 0 0 2 RPS3 POSTAR2 ENCODE chr14:95030079-95030113
64251 chr4 151504265 151504265 1 + C A LUAD 151504264 + 151504244 151504284 41 GGCGCGCAAGGCGGCCATCGCCAAAACCATCCGAGAGGTCT GGCGCGCAAGGCGGCCATCGCAAAAACCATCCGAGAGGTCT < 41bp 0.451966299403588 0.714311833562808 0.7433584 0.73968047 prediction 0.428623667125616 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504264 chr4:151504265 synonymous SNV . 0 22 hm5C_associated_SNPs_122452 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr4:151504254-151504286
64251 chr11 47283128 47283128 1 + C T COAD 47283127 + 47283107 47283147 41 ATGGCACCAGATCCCCATAGCCGGGAGGCCCGTCAGCAGCG ATGGCACCAGATCCCCATAGCTGGGAGGCCCGTCAGCAGCG < 41bp 0.589983967494876 0.804294874739292 0.8928102 0.63180304 prediction 0.428621814488831 Functional Gain - NR1H3 ENSG00000025434 CDS Human protein_coding chr11:47283127 chr11:47283128 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_122453 0 0 1 GRWD1 POSTAR2 ENCODE chr11:47283111-47283275
64251 chr19 44612155 44612155 1 + T C UCEC 44612153 + 44612133 44612173 41 GGTCCTCAACTCGTCTGACCCATCAGAGACGCCACAGCAGA GGTCCTCAACTCGTCTGACCCACCAGAGACGCCACAGCAGA < 41bp 0.628482462493179 0.842792481285321 0.030143827 0.071042985 prediction 0.428620037584284 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612153 chr19:44612155 synonymous SNV . 0 23 hm5C_associated_SNPs_122454 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44612127-44612161
64251 chr2 58315576 58315576 1 + C A LUAD 58315575 + 58315555 58315595 41 ACTGTCCTGCAATTAGGTATCCGAATGGTAAGAATTACTTA ACTGTCCTGCAATTAGGTATCAGAATGGTAAGAATTACTTA < 41bp 0.470014257587287 0.714306206648144 0.42416167 0.85499823 prediction 0.428612413296289 Functional Gain - VRK2 ENSG00000028116 CDS Human protein_coding chr2:58315575 chr2:58315576 synonymous SNV . 0 22 hm5C_associated_SNPs_122457 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:58315548-58315577
64251 chr19 58102049 58102049 1 + C T CESC 58102048 + 58102028 58102068 41 TGATCATCGGAGAATCCACACCGGAGAAAGGCCTTATGAGT TGATCATCGGAGAATCCACACTGGAGAAAGGCCTTATGAGT < 41bp 0.579166396296897 0.793470504884964 0.37471855 0.2023867 prediction 0.428608217176135 Functional Gain - ZIK1 ENSG00000171649 CDS Human protein_coding chr19:58102048 chr19:58102049 synonymous SNV . 0 22 hm5C_associated_SNPs_122458 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:58102029-58102060
64251 chr2 187454854 187454854 1 + C A rs61763604 187454853 + 187454833 187454873 41 AGGACCGTCTGCGCTGCTGTCCCCGCCCCGCGCGCTCTGCG AGGACCGTCTGCGCTGCTGTCACCGCCCCGCGCGCTCTGCG < 41bp 0.521503921438945 0.735805546297007 0.35954362 0.51054406 prediction 0.428603249716125 Functional Gain - ITGAV ENSG00000138448 UTR5 Human protein_coding chr2:187454853 chr2:187454854 . . 0 22 hm5C_associated_SNPs_122459 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:187454851-187454875
64251 chr3 49051540 49051540 1 + C G ESCA 49051539 + 49051519 49051559 41 ATCGGATGGTTAAGGTAGACCCAGAGACCAGGTAATATATG ATCGGATGGTTAAGGTAGACCGAGAGACCAGGTAATATATG < 41bp 0.401675458334308 0.714300429408222 0.87962896 0.9079399 prediction 0.428600858816443 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49051539 chr3:49051540 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_122460 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:49051468-49051547
64251 chr12 8902671 8902671 1 + C T COAD 8902670 + 8902650 8902690 41 CTGGCCATGGTGTTCCTCTGCCGGATACTTTCTCTTATGGT CTGGCCATGGTGTTCCTCTGCTGGATACTTTCTCTTATGGT < 41bp 0.460639877954519 0.714298554945676 0.56280714 0.39577672 prediction 0.428597109891352 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8902670 chr12:8902671 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_122461 0 0 1 BUD13 POSTAR2 ENCODE chr12:8902664-8902702
64251 chr19 17322987 17322987 1 + C T UCEC 17322986 + 17322966 17323006 41 ACATTCCGTGTACATCACGCCCGGGGCAGACCTGCCAGTGC ACATTCCGTGTACATCACGCCTGGGGCAGACCTGCCAGTGC < 41bp 0.529259460973123 0.743558002240506 0.6260569 0.63931173 prediction 0.428597082534766 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322986 chr19:17322987 synonymous SNV . 0 22 hm5C_associated_SNPs_122462 0 0 4 FMR1 POSTAR2 ENCODE chr19:17322983-17323027
64251 chr7 141464093 141464093 1 + C G LIHC 141464089 + 141464069 141464109 41 GACCAAGAGAATGTCTTTGTCTGACTTCATCATCACCACCC GACCAAGAGAATGTCTTTGTCTGAGTTCATCATCACCACCC < 41bp 0.659447467932913 0.873736143143499 0.117825985 0.33151972 prediction 0.428577350421172 Functional Gain - TAS2R3 ENSG00000127362 CDS Human protein_coding chr7:141464089 chr7:141464093 nonsynonymous SNV 0.995 4 25 hm5C_associated_SNPs_122469 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:141463814-141464109
64251 chr13 113765027 113765027 1 + C T rs376971927 113765026 + 113765006 113765046 41 TTCGTAACCCAGGAGGAAGCCCACGGCGTCCTGCACCGGCG TTCGTAACCCAGGAGGAAGCCTACGGCGTCCTGCACCGGCG < 41bp 0.575543375265341 0.789830752690687 0.36676157 0.76952803 prediction 0.42857475485069 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113765026 chr13:113765027 nonsynonymous SNV 0.113 2 22 hm5C_associated_SNPs_122470 0 0 9 AGGF1 POSTAR2 ENCODE chr13:113764998-113765041
64251 chr12 70133399 70133399 1 + C A rs143387389 70133398 + 70133378 70133418 41 CTCGGGAGGTTTCGGTGAAACCTGGTGGGAAATTCCGGGCA CTCGGGAGGTTTCGGTGAAACATGGTGGGAAATTCCGGGCA < 41bp 0.501242075489685 0.715528706244873 0.4244148 0.594713 prediction 0.428573261510375 Functional Gain - RAB3IP ENSG00000127328 UTR5 Human protein_coding chr12:70133398 chr12:70133399 . . 0 22 hm5C_associated_SNPs_122471 0 0 1 TBRG4 POSTAR2 ENCODE chr12:70133399-70133408
64251 chr10 71849844 71849844 1 + C T rs114922371 71849843 + 71849823 71849863 41 TCTAGAATTGGCCGGCAATGCCGCGAGGGACAACAAGAAGG TCTAGAATTGGCCGGCAATGCTGCGAGGGACAACAAGAAGG < 41bp 0.604281960558655 0.818566666765302 0.26267827 0.27520293 prediction 0.428569412413293 Functional Gain - H2AFY2 ENSG00000099284 CDS Human protein_coding chr10:71849843 chr10:71849844 synonymous SNV . 0 22 hm5C_associated_SNPs_122473 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:71849821-71849859
64251 chr16 14234490 14234490 1 + C T rs140275336 14234489 + 14234469 14234509 41 TCACACAGGGGCGATAGACACCGAGGATGAAGTGGGACCTT TCACACAGGGGCGATAGACACTGAGGATGAAGTGGGACCTT < 41bp 0.479636583395174 0.714283223214136 0.11104071 0.10809034 prediction 0.428566446428271 Functional Gain - MKL2 ENSG00000186260 CDS Human protein_coding chr16:14234489 chr16:14234490 synonymous SNV . 0 22 hm5C_associated_SNPs_122475 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:14234463-14234491
64251 chr16 3550998 3550998 1 + T G rs79384355 3550996 + 3550976 3551016 41 CCATTGGTTGCCATAGAGATCGTCGAGCGCTGGGCCTGTGA CCATTGGTTGCCATAGAGATCGGCGAGCGCTGGGCCTGTGA < 41bp 0.372032500365583 0.714275726004079 0.3331975 0.8527783 prediction 0.428551452008157 Functional Gain - CLUAP1 ENSG00000263212 ncRNA_intronic Human processed_transcript chr16:3550996 chr16:3550998 . . 0 23 hm5C_associated_SNPs_122481 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:3550989-3551022
64251 chr11 637466 637466 1 + C A rs535238096 637462 + 637442 637482 41 CGCGGTGCTCGCGGGGAACTCGCTCGTGTGCGTGAGCGTGG CGCGGTGCTCGCGGGGAACTCGCTAGTGTGCGTGAGCGTGG < 41bp 0.712086240150002 0.926360296795854 0.42385405 0.8431653 prediction 0.428548113291704 Functional Gain - DRD4 ENSG00000069696 CDS Human protein_coding chr11:637462 chr11:637466 synonymous SNV . 0 25 hm5C_associated_SNPs_122483 0 0 6 DDX24 POSTAR2 ENCODE chr11:637449-637501
64251 chr19 5667401 5667401 1 + C T UCEC 5667400 + 5667380 5667420 41 CATGGCCGAAGAGAGGATGACCGGTCATGGCAGGGCACGGC CATGGCCGAAGAGAGGATGACTGGTCATGGCAGGGCACGGC < 41bp 0.45813204977488 0.714268558922897 0.34805882 0.123460054 prediction 0.428537117845794 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5667400 chr19:5667401 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_122487 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr19:5667389-5667415
64251 chr12 50869526 50869526 1 + C A UCEC 50869525 + 50869505 50869545 41 GCTTCCGAGGCAATATAATCCCCAGGGGAGCAGCAGGAAAA GCTTCCGAGGCAATATAATCCACAGGGGAGCAGCAGGAAAA < 41bp 0.47189390258649 0.714265744269493 0.22533944 0.28656453 prediction 0.428531488538986 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869525 chr12:50869526 nonsynonymous SNV 0.960 3 22 hm5C_associated_SNPs_122488 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chr12:50869495-50869531
64251 chr11 8940924 8940924 1 + C T SKCM 8940923 + 8940903 8940943 41 ACCTCTACATAGAAGTATATCCAGGGACCTATTCTGTCACT ACCTCTACATAGAAGTATATCTAGGGACCTATTCTGTCACT < 41bp 0.510685130754424 0.724950218789834 0.54926753 0.11462468 prediction 0.428530176070819 Functional Gain - AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8940923 chr11:8940924 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_122489 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:8940891-8940927
64251 chr19 30936018 30936018 1 + C T COAD 30936017 + 30935997 30936037 41 GCCAAGGCTGCGGAGATGGACCCCGTGAACAGCTACCAGGC GCCAAGGCTGCGGAGATGGACTCCGTGAACAGCTACCAGGC < 41bp 0.455277506457973 0.714259707672897 0.13087943 0.21855497 prediction 0.428519415345794 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936017 chr19:30936018 nonsynonymous SNV 0.808 1 22 hm5C_associated_SNPs_122491 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:30936014-30936033
64251 chr1 156106204 156106204 1 + C T UCEC 156106203 + 156106183 156106223 41 GATGAGGAGGGCAAGTTTGTCCGGCTGCGCAACAAGTCCAA GATGAGGAGGGCAAGTTTGTCTGGCTGCGCAACAAGTCCAA < 41bp 0.578055842330748 0.792312352446092 0.7413281 0.5234223 prediction 0.428513020230687 Functional Gain - LMNA ENSG00000160789 CDS Human protein_coding chr1:156106203 chr1:156106204 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_122494 5 0 9 FUS POSTAR2 GSE40653,GSM998875 chr1:156106200-156106220
64251 chr6 73332121 73332121 1 + C G rs34821312 73332117 + 73332097 73332137 41 GCTGGGCACCCGCGCGGCCACGCTCGGTGGCGGCGGCGGTG GCTGGGCACCCGCGCGGCCACGCTGGGTGGCGGCGGCGGTG < 41bp 0.599806274150699 0.814052720616289 0.08273399 0.43193865 prediction 0.428492892931181 Functional Gain - KCNQ5 ENSG00000185760 CDS Human protein_coding chr6:73332117 chr6:73332121 synonymous SNV . 0 25 hm5C_associated_SNPs_122496 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr6:73332120-73332121
64251 chr6 26156586 26156586 1 + C G rs2298088 26156582 + 26156562 26156602 41 CCCGGCCAGTGCCTCTGCTTCCGGCTCGAATTGCTCTCGCT CCCGGCCAGTGCCTCTGCTTCCGGGTCGAATTGCTCTCGCT < 41bp 0.633185345696573 0.847429332133328 0.57899636 0.92213404 prediction 0.428487972873511 Functional Gain - HIST1H1E ENSG00000168298 UTR5 Human protein_coding chr6:26156582 chr6:26156586 . . 0 25 hm5C_associated_SNPs_122498 0 0 59 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:26156578-26156606
64251 chr1 154229643 154229643 1 + C T CESC 154229642 + 154229622 154229662 41 CCCAGTGGTCAGTGTCTCCTCCAGTCTCAATAGTGGCAGTA CCCAGTGGTCAGTGTCTCCTCTAGTCTCAATAGTGGCAGTA < 41bp 0.469092520770183 0.714240855534885 0.35424984 0.22391847 prediction 0.42848171106977 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154229642 chr1:154229643 synonymous SNV . 0 22 hm5C_associated_SNPs_122500 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr1:154229615-154229644
64251 chr20 25656557 25656557 1 - T C LAML 25656560 - 25656540 25656580 41 GAAACATCAGATCACACACTCAGAGGAGAAGCCTTTTGTGT GAAACATCAGATCACACACTCAGGGGAGAAGCCTTTTGTGT < 41bp 0.462333484048339 0.714240311293603 0.92968273 0.9459331 prediction 0.428480622587206 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25656560 chr20:25656557 nonsynonymous SNV 0.009 0 24 hm5C_associated_SNPs_122501 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:25656507-25656561
64251 chr9 127113224 127113224 1 + T C STAD 127113222 + 127113202 127113242 41 GCACATCTGGATGTCCAGCACCTGAGCGTGGATGCACCGTG GCACATCTGGATGTCCAGCACCCGAGCGTGGATGCACCGTG < 41bp 0.434090363141144 0.71422665046733 0.3911953 0.33532467 prediction 0.42845330093466 Functional Gain - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127113222 chr9:127113224 stoploss 0.750 0 23 hm5C_associated_SNPs_122507 0 0 1 RPS3 POSTAR2 ENCODE chr9:127113115-127113231
64251 chr2 232574964 232574964 1 + C G rs376051788 232574963 + 232574943 232574983 41 CCGGCCGACCGACGCGCGACCCGCGCGCGTGCCACTGCAAG CCGGCCGACCGACGCGCGACCGGCGCGCGTGCCACTGCAAG < 41bp 0.660683331032696 0.874906389249697 0.22765866 0.8282541 prediction 0.428446116434002 Functional Gain - PTMA ENSG00000187514 CDS Human protein_coding chr2:232574963 chr2:232574964 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_122508 0 0 6 DGCR8 POSTAR2 ENCODE chr2:232574931-232574965
64251 chr7 23650987 23650987 1 + T A UCEC 23650983 + 23650963 23651003 41 TGTCCCAGAAATTGAGTTTACTGTTGCTTGTATTTGGACTC TGTCCCAGAAATTGAGTTTACTGTAGCTTGTATTTGGACTC < 41bp 0.393114962625499 0.714221490401161 0.03423947 0.08174464 prediction 0.428442980802322 Functional Gain - CCDC126 ENSG00000169193 CDS Human protein_coding chr7:23650983 chr7:23650987 stopgain 1.000 1 25 hm5C_associated_SNPs_122509 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:23650973-23651003
64251 chr3 52526092 52526092 1 + C G LUSC 52526091 + 52526071 52526111 41 GCTGCAGGGGCCCCCTGCGCCCCAAGACACTCCTGCTCACC GCTGCAGGGGCCCCCTGCGCCGCAAGACACTCCTGCTCACC < 41bp 0.394295147387155 0.714207647288429 0.045425713 0.1444616 prediction 0.428415294576857 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526091 chr3:52526092 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_122513 0 0 1 EIF3H POSTAR2 ENCODE chr3:52526087-52526197
64251 chr8 37635597 37635597 1 + C T GBM 37635596 + 37635576 37635616 41 GCGCAGCAGACGTGAAGGCCCCGCTGGAGGTGGCACAGGAG GCGCAGCAGACGTGAAGGCCCTGCTGGAGGTGGCACAGGAG < 41bp 0.47580579592089 0.714195030449474 0.09962252 0.19170761 prediction 0.428390060898948 Functional Gain - PLPBP ENSG00000147471 CDS Human protein_coding chr8:37635596 chr8:37635597 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_122519 0 0 1 RPS3 POSTAR2 ENCODE chr8:37635520-37635607
64251 chr17 7984079 7984079 1 + C T SKCM 7984078 + 7984058 7984098 41 AGTTGATGAGAATTGGGAATCCCGGAATATAGCCATTCCAC AGTTGATGAGAATTGGGAATCTCGGAATATAGCCATTCCAC < 41bp 0.534388677109716 0.748577744377316 0.7275303 0.3667527 prediction 0.428378134535198 Functional Gain - ALOX12B ENSG00000179477 CDS Human protein_coding chr17:7984078 chr17:7984079 nonsynonymous SNV 0.788 5 22 hm5C_associated_SNPs_122523 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr17:7984069-7984096
64251 chr7 5642987 5642987 1 + C G rs111761155 5642983 + 5642963 5643003 41 AAAAGTGTGCCTTCCGTACCCACACGGGCAAGTACTGGACG AAAAGTGTGCCTTCCGTACCCACAGGGGCAAGTACTGGACG < 41bp 0.423062768330384 0.714177391805015 0.9002799 0.9142038 prediction 0.428354783610031 Functional Gain - FSCN1 ENSG00000075618 CDS Human protein_coding chr7:5642983 chr7:5642987 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_122531 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr7:5642962-5642990
64251 chr4 38682300 38682300 1 + A G rs114311199 38682297 + 38682277 38682317 41 CAAGAGGCCATGGACCCTGTCTCAGTGGTAAGTTTTCCAAG CAAGAGGCCATGGACCCTGTCTCGGTGGTAAGTTTTCCAAG < 41bp 0.574305955543148 0.788466391363722 0.022313803 0.034260154 prediction 0.428320871641148 Functional Gain - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38682297 chr4:38682300 synonymous SNV . 0 24 hm5C_associated_SNPs_122541 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:38682277-38682301
64251 chr22 46067840 46067840 1 + C A rs114149373 46067836 + 46067816 46067856 41 AGGGCTGTGTAGGGCGAGGCCTCCCCCTTCCTCCTCGCCAT AGGGCTGTGTAGGGCGAGGCCTCCACCTTCCTCCTCGCCAT < 41bp 0.683605394170476 0.897752928312771 0.17705962 0.8753349 prediction 0.42829506828459 Functional Gain - ATXN10 ENSG00000130638 UTR5 Human protein_coding chr22:46067836 chr22:46067840 . . 0 25 hm5C_associated_SNPs_122547 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:46067720-46067900
64251 chr5 167915643 167915643 1 + C A rs200285372 167915642 + 167915622 167915662 41 TCTCTGACTGCTGAAATTGACCGGTTGAAAAACTGTGGCTG TCTCTGACTGCTGAAATTGACAGGTTGAAAAACTGTGGCTG < 41bp 0.627970439189685 0.842115818462593 0.4319259 0.8546245 prediction 0.428290758545816 Functional Gain - RARS ENSG00000113643 CDS Human protein_coding chr5:167915642 chr5:167915643 synonymous SNV . 0 22 hm5C_associated_SNPs_122549 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr5:167915613-167915646
64251 chr7 116381066 116381066 1 + C A GBM 116381062 + 116381042 116381082 41 CATGGACTCAACAGATCTGTCTGCCTGCAATCTACAAGGTA CATGGACTCAACAGATCTGTCTGCATGCAATCTACAAGGTA < 41bp 0.31476727443907 0.714142096455435 0.48227626 0.81755304 prediction 0.42828419291087 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116381062 chr7:116381066 nonsynonymous SNV 0.284 5 25 hm5C_associated_SNPs_122551 0 0 1 SND1 POSTAR2 ENCODE chr7:116381003-116381066
64251 chr1 15956966 15956966 1 + C T LUAD 15956965 + 15956945 15956985 41 TTGGACAATCCAGCCTTGCTCCGAGATATGTTGCTGGCCAA TTGGACAATCCAGCCTTGCTCTGAGATATGTTGCTGGCCAA < 41bp 0.596620058926863 0.810761585443165 0.78744894 0.32652557 prediction 0.428283053032605 Functional Gain - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15956965 chr1:15956966 stopgain 1.000 0 22 hm5C_associated_SNPs_122552 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:15956948-15956974
64251 chrX 154464638 154464638 1 + C A LUSC 154464634 + 154464614 154464654 41 CTTTCTTCGAGATCAATTTACTACCACAGAAGTCAGTATCC CTTTCTTCGAGATCAATTTACTACAACAGAAGTCAGTATCC < 41bp 0.292315503102436 0.714139628727466 0.07713112 0.49736118 prediction 0.428279257454933 Functional Gain - VBP1 ENSG00000155959 CDS Human protein_coding chrX:154464634 chrX:154464638 synonymous SNV . 0 25 hm5C_associated_SNPs_122553 0 0 2 YBX3 POSTAR2 ENCODE chrX:154464634-154464643
64251 chr13 113803411 113803411 1 + C T STAD 113803410 + 113803390 113803430 41 CCTCCCCGAGCGTGACTGGGCCGAGTCCACGCTGATGACGC CCTCCCCGAGCGTGACTGGGCTGAGTCCACGCTGATGACGC < 41bp 0.565818877415729 0.779949291295564 0.23326203 0.14303434 prediction 0.42826082775967 Functional Gain - F10 ENSG00000126218 CDS Human protein_coding chr13:113803410 chr13:113803411 synonymous SNV . 0 22 hm5C_associated_SNPs_122555 0 0 4 RPS3 POSTAR2 ENCODE chr13:113803360-113803415
64251 chr5 44809103 44809103 1 + T G STAD 44809100 + 44809080 44809120 41 TGTTGGAGGCCTTTGCTACGCGGTCCGAGGCTTTCATTGCA TGTTGGAGGCCTTTGCTACGCGGGCCGAGGCTTTCATTGCA < 41bp 0.71436421941436 0.928492891107379 0.33678776 0.85479933 prediction 0.428257343386037 Functional Gain - MRPS30 ENSG00000112996 CDS Human protein_coding chr5:44809100 chr5:44809103 synonymous SNV . 0 24 hm5C_associated_SNPs_122556 0 0 14 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:44809094-44809118
64251 chr3 33185859 33185859 1 + A G rs4429578 33185856 + 33185836 33185876 41 GGGAGGTTCTGGCTGCAAATCAAAGTGGAGAGTTCTCTCAG GGGAGGTTCTGGCTGCAAATCAAGGTGGAGAGTTCTCTCAG < 41bp 0.570111876409548 0.784232330440816 0.88173115 0.918992 prediction 0.428240908062536 Functional Gain - CRTAP ENSG00000272149 ncRNA_intronic Human antisense chr3:33185856 chr3:33185859 . . 0 24 hm5C_associated_SNPs_122559 1 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr3:33185832-33185863
64251 chr3 48309809 48309809 1 + C T SKCM 48309808 + 48309788 48309828 41 ATTTCCAAGAGGGCAGAAACCCCAGGGTTTGGAGCAGTCAC ATTTCCAAGAGGGCAGAAACCTCAGGGTTTGGAGCAGTCAC < 41bp 0.477529576296519 0.714113383765552 0.3875942 0.164848 prediction 0.428226767531104 Functional Gain - ZNF589 ENSG00000164048 CDS Human protein_coding chr3:48309808 chr3:48309809 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_122563 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:48309714-48309813
64251 chrX 149887149 149887149 1 + C T SKCM 149887148 + 149887128 149887168 41 TGGAAGAGGCTCCACTTTTCCCAGGAGAATCAATTAAAGCC TGGAAGAGGCTCCACTTTTCCTAGGAGAATCAATTAAAGCC < 41bp 0.469140480232272 0.714112292025476 0.45925236 0.22235319 prediction 0.428224584050952 Functional Gain - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149887148 chrX:149887149 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_122564 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chrX:149887140-149887160
64251 chr7 99051674 99051674 1 + C A THCA 99051673 + 99051653 99051693 41 CTCCCAATCAGCAGAGAACCCCGCAGGTCATCGGGGTCATG CTCCCAATCAGCAGAGAACCCAGCAGGTCATCGGGGTCATG < 41bp 0.625258858224611 0.839367391033998 0.17888436 0.28368324 prediction 0.428217065618774 Functional Gain - CPSF4 ENSG00000160917 CDS Human protein_coding chr7:99051673 chr7:99051674 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_122567 0 0 4 PPIG POSTAR2 ENCODE chr7:99051668-99051751
64251 chr19 48255791 48255791 1 + A G COAD 48255788 + 48255768 48255808 41 GCGGCCAGCACGCCTGCACACCAAGCCGTCCCAGGCACCCG GCGGCCAGCACGCCTGCACACCAGGCCGTCCCAGGCACCCG < 41bp 0.457737558040634 0.714107336352906 0.18099952 0.25732207 prediction 0.428214672705811 Functional Gain - NOP53 ENSG00000105373 CDS Human protein_coding chr19:48255788 chr19:48255791 nonsynonymous SNV 0.135 3 24 hm5C_associated_SNPs_122569 0 0 1 DDX6 POSTAR2 ENCODE chr19:48255768-48255799
64251 chrX 135290715 135290715 1 + C T OV 135290714 + 135290694 135290734 41 GCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATT GCTGGCTGGGCAGCGTTTCACTGCTGTGGAGGACCAGTATT < 41bp 0.581954917388828 0.796059627106065 0.25906637 0.353818 prediction 0.428209419434474 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135290714 chrX:135290715 synonymous SNV . 0 22 hm5C_associated_SNPs_122571 1 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chrX:135290694-135290722
64251 chr4 152024637 152024637 1 + A G rs28523454 152024634 + 152024614 152024654 41 GCCAGGCTGGTCTTGAACTCCTGACTTCAGGTGATCTGCCA GCCAGGCTGGTCTTGAACTCCTGGCTTCAGGTGATCTGCCA < 41bp 0.503665188189045 0.717764538713077 0.28241968 0.3141724 prediction 0.428198701048064 Functional Gain - RPS3A ENSG00000145425 UTR3 Human protein_coding chr4:152024634 chr4:152024637 . . 0 24 hm5C_associated_SNPs_122574 0 0 3 HNRNPC POSTAR2 ENCODE chr4:152024593-152024666
64251 chr15 41188276 41188276 1 + C A UCEC 41188275 + 41188255 41188295 41 CTGGGCAAGGATACACTGCTCCGGTAATCAAGAGCTCACAG CTGGGCAAGGATACACTGCTCAGGTAATCAAGAGCTCACAG < 41bp 0.436557666487946 0.714081609957235 0.18812943 0.7922149 prediction 0.428163219914469 Functional Gain - VPS18 ENSG00000104142 CDS Human protein_coding chr15:41188275 chr15:41188276 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_122578 0 0 1 PRPF8 POSTAR2 ENCODE chr15:41188249-41188315
64251 chr6 28195016 28195016 1 + C T PAAD 28195015 + 28194995 28195035 41 CCACTGGCAAGGGAAATCTTCCGAAGGCACTTTCGACAGCT CCACTGGCAAGGGAAATCTTCTGAAGGCACTTTCGACAGCT < 41bp 0.592342463705922 0.806396357661338 0.2785037 0.28506637 prediction 0.428107787910832 Functional Gain - ZSCAN9 ENSG00000137185 CDS Human protein_coding chr6:28195015 chr6:28195016 stopgain 0.978 0 22 hm5C_associated_SNPs_122584 0 0 1 RBM15 POSTAR2 ENCODE chr6:28195016-28195117
64251 chr19 10980353 10980353 1 + C G rs1861634 10980352 + 10980332 10980372 41 CGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTTCCC CGTCCCAGGTCTCTGCACACCGGTGGAATTCCTCCCTTCCC < 41bp 0.60758378675126 0.821633602807575 0.35615614 0.91715115 prediction 0.42809963211263 Functional Gain - C19orf38 ENSG00000214212 UTR3 Human protein_coding chr19:10980352 chr19:10980353 . . 0 22 hm5C_associated_SNPs_122586 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10980346-10980375
64251 chr11 22759270 22759270 1 + A G COAD 22759267 + 22759247 22759287 41 TCAGTCCTCCACAAGCAACCCAGAGAAGTGTGTCTCTGTCT TCAGTCCTCCACAAGCAACCCAGGGAAGTGTGTCTCTGTCT < 41bp 0.581446879175448 0.795494527864956 0.38781708 0.80297005 prediction 0.428095297379016 Functional Gain - GAS2 ENSG00000148935 CDS Human protein_coding chr11:22759267 chr11:22759270 synonymous SNV . 0 24 hm5C_associated_SNPs_122589 0 0 4 BUD13 POSTAR2 ENCODE chr11:22759208-22759341
64251 chr9 140147861 140147861 1 - G T UCEC 140147862 - 140147842 140147882 41 CCAGGCTGGGCCAGCCTTGTCCACAGCCCATAGAAGGGTTG CCAGGCTGGGCCAGCCTTGTCAACAGCCCATAGAAGGGTTG < 41bp 0.5869561791921 0.801002267803539 0.2603639 0.40049282 prediction 0.428092177222879 Functional Gain - STPG3 ENSG00000197768 CDS Human protein_coding chr9:140147862 chr9:140147861 synonymous SNV . 0 22 hm5C_associated_SNPs_122590 0 0 1 PTBP1 POSTAR2 ENCODE chr9:140147845-140147910
64251 chr2 122522723 122522723 1 + T C PAAD 122522720 + 122522700 122522740 41 CCTGGTACAGTCGAGGCTGTCTGTCAACAGCGTGACTGCTG CCTGGTACAGTCGAGGCTGTCTGCCAACAGCGTGACTGCTG < 41bp 0.492625683068811 0.714045359222726 0.13925305 0.15265757 prediction 0.428090718445452 Functional Gain - TSN ENSG00000211460 CDS Human protein_coding chr2:122522720 chr2:122522723 nonsynonymous SNV 0.990 4 24 hm5C_associated_SNPs_122592 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:122522709-122522733
64251 chr21 43979141 43979141 1 + C A STAD 43979140 + 43979120 43979160 41 CGAACCACGTCGTCATTCTCCCCGGGGACGGTGGGAGTGGC CGAACCACGTCGTCATTCTCCACGGGGACGGTGGGAGTGGC < 41bp 0.630092872897279 0.844135544602359 0.855005 0.91305727 prediction 0.42808534341016 Functional Gain - SLC37A1 ENSG00000160190 CDS Human protein_coding chr21:43979140 chr21:43979141 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_122594 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:43979131-43979163
64251 chr4 186066058 186066058 1 + C T rs145413043 186066057 + 186066037 186066077 41 CGTGATCCGTTACTTCCCCACCCAAGCTCTCAACTTCGCCT CGTGATCCGTTACTTCCCCACTCAAGCTCTCAACTTCGCCT < 41bp 0.43902158863169 0.714031374174343 0.17306632 0.28128198 prediction 0.428062748348687 Functional Gain - SLC25A4 ENSG00000151729 CDS Human protein_coding chr4:186066057 chr4:186066058 synonymous SNV . 0 22 hm5C_associated_SNPs_122598 0 0 1 YBX3 POSTAR2 ENCODE chr4:186066035-186066107
64251 chr2 120020658 120020658 1 + T C BRCA 120020656 + 120020636 120020676 41 TCACTGGGCTTTGTGGCCCTCGTGCTGAGCACACTGCACAC TCACTGGGCTTTGTGGCCCTCGCGCTGAGCACACTGCACAC < 41bp 0.455674016449282 0.714017943669985 0.64015317 0.78932047 prediction 0.428035887339971 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120020656 chr2:120020658 nonsynonymous SNV 0.997 0 23 hm5C_associated_SNPs_122601 0 0 2 SND1 POSTAR2 ENCODE chr2:120020633-120020674
64251 chr12 109536366 109536366 1 + C T rs151095402 109536365 + 109536345 109536385 41 GCCCTGCTCAGACTCGCGGCCCGCAACGTGCCCGTGGGCTT GCCCTGCTCAGACTCGCGGCCTGCAACGTGCCCGTGGGCTT < 41bp 0.603456623754411 0.817470621675745 0.02520001 0.019279033 prediction 0.428027995842668 Functional Gain - UNG ENSG00000076248 CDS Human protein_coding chr12:109536365 chr12:109536366 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_122602 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:109536355-109536380
64251 chr11 125267785 125267785 1 + C T SKCM 125267784 + 125267764 125267804 41 CCACAGATGGTGAAGGCAATCCAGGTCCTGAGAATCCACCT CCACAGATGGTGAAGGCAATCTAGGTCCTGAGAATCCACCT < 41bp 0.584531441259528 0.798535736187243 0.5316109 0.4179861 prediction 0.428008589855429 Functional Gain - PKNOX2 ENSG00000165495 CDS Human protein_coding chr11:125267784 chr11:125267785 stopgain 1.000 1 22 hm5C_associated_SNPs_122606 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr11:125267768-125267786
64251 chr14 24108419 24108419 1 + C T PAAD 24108418 + 24108398 24108438 41 GCCATCGCCCGACGTCTGGCCCGGGACGGGGCCCACGTGGT GCCATCGCCCGACGTCTGGCCTGGGACGGGGCCCACGTGGT < 41bp 0.561226212707419 0.775223640151129 0.5239075 0.4277526 prediction 0.427994854887421 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108418 chr14:24108419 nonsynonymous SNV 0.025 2 22 hm5C_associated_SNPs_122607 0 0 5 EFTUD2 POSTAR2 ENCODE chr14:24108327-24108447
64251 chr7 116771972 116771972 1 + A G UCEC 116771969 + 116771949 116771989 41 AGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAG AGCCTGGAGAGAGAGAAACCCCCGAGCTAGGATTTCTGCAG < 41bp 0.555146564182046 0.769132898525017 0.8231436 0.7845937 prediction 0.427972668685942 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116771969 chr7:116771972 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_122617 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:116771961-116771992
64251 chr3 5025948 5025948 1 + C A rs529418777 5025944 + 5025924 5025964 41 ACATGGGGAGGTAGCAGGCACTGGCATAGCACGGTAGTGGT ACATGGGGAGGTAGCAGGCACTGGAATAGCACGGTAGTGGT < 41bp 0.720330680145853 0.934302676110688 0.3410123 0.482929 prediction 0.42794399192967 Functional Gain - BHLHE40 ENSG00000134107 UTR3 Human protein_coding chr3:5025944 chr3:5025948 . . 0 25 hm5C_associated_SNPs_122624 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:5025923-5025948
64251 chr17 45993860 45993860 1 + C A BLCA 45993856 + 45993836 45993876 41 GGCGGTCCCTCAGATTCAGGCAAGCAATTCCCAAACCATCC GGCGGTCCCTCAGATTCAGGCAAGAAATTCCCAAACCATCC < 41bp 0.292392622965814 0.713963325025939 0.0861702 0.1664618 prediction 0.427926650051878 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:45993856 chr17:45993860 nonsynonymous SNV 0.951 1 25 hm5C_associated_SNPs_122626 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr17:45993840-45993860
64251 chr10 121184524 121184524 1 + A G UCEC 121184521 + 121184501 121184541 41 CTAGGTCTGTCCACGAGTACCTGAGGGGAGAACCATTCCAC CTAGGTCTGTCCACGAGTACCTGGGGGGAGAACCATTCCAC < 41bp 0.590621606251772 0.80456794806363 0.20188117 0.6410837 prediction 0.427892683623716 Functional Gain - GRK5 ENSG00000198873 CDS Human protein_coding chr10:121184521 chr10:121184524 nonsynonymous SNV 0.997 0 24 hm5C_associated_SNPs_122633 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr10:121184517-121184542
64251 chr1 76254929 76254929 1 + T C LUAD 76254927 + 76254907 76254947 41 CTCATGGGACAACTTCATCGCATGAATAGAGAAGAGATTCT CTCATGGGACAACTTCATCGCACGAATAGAGAAGAGATTCT < 41bp 0.624978190359418 0.838922249486606 0.064582944 0.02443266 prediction 0.427888118254376 Functional Gain - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76254927 chr1:76254929 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_122637 0 0 28 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:76254808-76254957
64251 chr7 127724856 127724856 1 + C A GBM 127724855 + 127724835 127724875 41 GTAGAGGGCTCCTATGCCCCCCGCAGGGGAGAGTTCTGCAT GTAGAGGGCTCCTATGCCCCCAGCAGGGGAGAGTTCTGCAT < 41bp 0.589930554948559 0.803873225586896 0.09116796 0.37432107 prediction 0.427885341276673 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127724855 chr7:127724856 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_122641 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:127724820-127724865
64251 chr3 41275668 41275668 1 + C A THCA 41275667 + 41275647 41275687 41 TCGAAATCTTGCCCTTTGTCCCGCAAATCATGCACCTTTGC TCGAAATCTTGCCCTTTGTCCAGCAAATCATGCACCTTTGC < 41bp 0.459257005307881 0.713941903305094 0.0518336 0.1824167 prediction 0.427883806610188 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41275667 chr3:41275668 synonymous SNV . 0 22 hm5C_associated_SNPs_122643 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:41275633-41275670
64251 chr1 46738151 46738151 1 + A G LUSC 46738148 + 46738128 46738168 41 TTTTCTCTAGATGCCTGATACGGAGGACTTCTGATATCCTT TTTTCTCTAGATGCCTGATACGGGGGACTTCTGATATCCTT < 41bp 0.572714268373302 0.786655934953835 0.44710726 0.92096466 prediction 0.427883333161065 Functional Gain - RAD54L ENSG00000085999 CDS Human protein_coding chr1:46738148 chr1:46738151 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_122644 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:46738128-46738157
64251 chr11 76506808 76506808 1 + C A UCEC 76506807 + 76506787 76506827 41 GATTGTAGCGGCCTGGGCCCCCACATCATGCCGGTGCCCAT GATTGTAGCGGCCTGGGCCCCAACATCATGCCGGTGCCCAT < 41bp 0.60055864112839 0.814498268335856 0.06754506 0.048133105 prediction 0.427879254414934 Functional Gain - TSKU ENSG00000182704 CDS Human protein_coding chr11:76506807 chr11:76506808 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_122645 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:76506777-76506815
64251 chr1 156563782 156563782 1 + T C LUSC 156563780 + 156563760 156563800 41 TTTACCGGTCGCTACCATTACCTGGGGGGTCGTTTTGTGCC TTTACCGGTCGCTACCATTACCCGGGGGGTCGTTTTGTGCC < 41bp 0.439112365734508 0.713936903151097 0.7771715 0.3306263 prediction 0.427873806302195 Functional Gain - NAXE ENSG00000163382 CDS Human protein_coding chr1:156563780 chr1:156563782 nonsynonymous SNV 0.815 4 23 hm5C_associated_SNPs_122648 0 0 5 CSTF2 POSTAR2 GSE37401,GSM917676 chr1:156563771-156563783
64251 chr12 112926909 112926909 1 + A G GBM 112926906 + 112926886 112926926 41 AGGGATGGTCCAGACAGAAGCACAGTACCGATTTATCTATA AGGGATGGTCCAGACAGAAGCACGGTACCGATTTATCTATA < 41bp 0.474771558009929 0.713934025111706 0.19269651 0.47709537 prediction 0.427868050223411 Functional Gain - PTPN11 ENSG00000179295 CDS Human protein_coding chr12:112926906 chr12:112926909 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_122652 2 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:112926856-112926912
64251 chr21 44329129 44329129 1 + T G OV 44329126 + 44329106 44329146 41 CAGGCCGGGAGTCACCTCGACACTGAGGGCCCTCGGTGTGA CAGGCCGGGAGTCACCTCGACACGGAGGGCCCTCGGTGTGA < 41bp 0.305055904661511 0.71393132560167 0.10601878 0.21257892 prediction 0.427862651203339 Functional Gain - NDUFV3 ENSG00000160194 CDS Human protein_coding chr21:44329126 chr21:44329129 stoploss 0.268 0 24 hm5C_associated_SNPs_122655 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:44329116-44329149
64251 chr15 90119090 90119090 1 + C T CESC 90119089 + 90119069 90119109 41 CGAGGATCGCGCCCACCTGCCCGGCCCGGCGCCCAGGGCCA CGAGGATCGCGCCCACCTGCCTGGCCCGGCGCCCAGGGCCA < 41bp 0.52221852245566 0.736144511297913 0.18630826 0.13752273 prediction 0.427851977684505 Functional Gain - TICRR ENSG00000140534 CDS Human protein_coding chr15:90119089 chr15:90119090 synonymous SNV . 0 22 hm5C_associated_SNPs_122658 0 0 3 EIF3H POSTAR2 ENCODE chr15:90119028-90119100
64251 chr6 99283893 99283893 1 + C T GBM 99283892 + 99283872 99283912 41 AAATGCCCCAAGCCCTCGGCCCAGGAGATCACCTCCCTCGC AAATGCCCCAAGCCCTCGGCCTAGGAGATCACCTCCCTCGC < 41bp 0.471250156094264 0.713920524104445 0.54224676 0.15472546 prediction 0.42784104820889 Functional Gain - POU3F2 ENSG00000184486 CDS Human protein_coding chr6:99283892 chr6:99283893 stopgain 1.000 0 22 hm5C_associated_SNPs_122662 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:99283893-99283894
64251 chr8 144351631 144351631 1 + C T COAD 144351630 + 144351610 144351650 41 CCCCTGTCAGTCTCTCATCACCAGGGACACCTGGAACCCAG CCCCTGTCAGTCTCTCATCACTAGGGACACCTGGAACCCAG < 41bp 0.483398597547868 0.713914181455679 0.9482777 0.7612691 prediction 0.427828362911359 Functional Gain - GLI4 ENSG00000250571 CDS Human protein_coding chr8:144351630 chr8:144351631 nonsynonymous SNV 0.105 1 22 hm5C_associated_SNPs_122665 0 0 2 DDX3X POSTAR2 ENCODE chr8:144351523-144351672
64251 chr6 3850483 3850483 1 + C T UCEC 3850482 + 3850462 3850502 41 CGGAAACCTGGGCAAGAACCCCGACGTGGACACCAGCTTCC CGGAAACCTGGGCAAGAACCCTGACGTGGACACCAGCTTCC < 41bp 0.545568376844728 0.759481576469578 0.52897197 0.39802706 prediction 0.427826399249701 Functional Gain - FAM50B ENSG00000145945 CDS Human protein_coding chr6:3850482 chr6:3850483 synonymous SNV . 0 22 hm5C_associated_SNPs_122667 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:3850465-3850503
64251 chr17 48052185 48052185 1 + C A rs534259186 48052184 + 48052164 48052204 41 TTAGTGCGGGTATAGACACCCCCAAATAGGTGGGTAGGCCC TTAGTGCGGGTATAGACACCCACAAATAGGTGGGTAGGCCC < 41bp 0.54959993724022 0.763510983541293 0.06762314 0.1236403 prediction 0.427822092602146 Functional Gain - DLX4 ENSG00000108813 UTR3 Human protein_coding chr17:48052184 chr17:48052185 . . 0 22 hm5C_associated_SNPs_122669 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr17:48052178-48052208
64251 chr6 20402541 20402541 1 + C T STAD 20402540 + 20402520 20402560 41 GGAGGGGGCGGCTGTCGTCGCCGCCGCCGCTGCAGCCTCCA GGAGGGGGCGGCTGTCGTCGCTGCCGCCGCTGCAGCCTCCA < 41bp 0.510226195922368 0.724135738883747 0.30531862 0.3449443 prediction 0.427819085922759 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20402540 chr6:20402541 synonymous SNV . 0 22 hm5C_associated_SNPs_122671 0 0 6 CSTF2T POSTAR2 ENCODE chr6:20402501-20402548
64251 chr12 100904574 100904574 1 + T A OV 100904570 + 100904550 100904590 41 GTTCAGGTGTTTTAACAGAACAAGTGGCAGGTCCTCTGGGA GTTCAGGTGTTTTAACAGAACAAGAGGCAGGTCCTCTGGGA < 41bp 0.665363820539452 0.87926032135459 0.31624842 0.5752735 prediction 0.427793001630275 Functional Gain - NR1H4 ENSG00000012504 CDS Human protein_coding chr12:100904570 chr12:100904574 nonsynonymous SNV 0.948 1 25 hm5C_associated_SNPs_122673 0 0 2 GRWD1 POSTAR2 ENCODE chr12:100904560-100904609
64251 chr15 41105991 41105991 1 + C T SARC 41105990 + 41105970 41106010 41 TTCTCGACCCTGGACGCAACCCCGCGGGGCAGAGCCTGAGG TTCTCGACCCTGGACGCAACCTCGCGGGGCAGAGCCTGAGG < 41bp 0.455322257329498 0.713892074621767 0.124655366 0.10850373 prediction 0.427784149243534 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41105990 chr15:41105991 synonymous SNV . 0 22 hm5C_associated_SNPs_122679 0 0 5 BUD13 POSTAR2 ENCODE chr15:41105921-41106013
64251 chr19 42828940 42828940 1 + C T SKCM 42828939 + 42828919 42828959 41 CTCCCGCTGTTCCGTGACCTCCGGCCCCCTGGCCCCCTTCG CTCCCGCTGTTCCGTGACCTCTGGCCCCCTGGCCCCCTTCG < 41bp 0.552165484059926 0.766046498019069 0.74934155 0.16458651 prediction 0.427762027918285 Functional Gain - TMEM145 ENSG00000167619 CDS Human protein_coding chr19:42828939 chr19:42828940 nonsynonymous SNV 0.992 2 22 hm5C_associated_SNPs_122682 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:42828934-42828966
64251 chr14 39646669 39646669 1 + A G UCEC 39646666 + 39646646 39646686 41 ATCACGCCAGGAAAGCGACCCGGAGGATGATGATGTTAAAA ATCACGCCAGGAAAGCGACCCGGGGGATGATGATGTTAAAA < 41bp 0.576857955015898 0.79073004201131 0.7554488 0.8998497 prediction 0.427744173990825 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39646666 chr14:39646669 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_122684 0 0 24 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:39646613-39646680
64251 chr7 102574861 102574861 1 + T C rs138612514 102574858 + 102574838 102574878 41 CTTTATGACAACCCCTGGCACTGTACTTGTGAGATAGAAAC CTTTATGACAACCCCTGGCACTGCACTTGTGAGATAGAAAC < 41bp 0.480662795755581 0.713871555850752 0.053377807 0.09500906 prediction 0.427743111701503 Functional Gain - LRRC17 ENSG00000128606 CDS Human protein_coding chr7:102574858 chr7:102574861 synonymous SNV . 0 24 hm5C_associated_SNPs_122685 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:102574841-102574866
64251 chr16 21312500 21312500 1 + T C rs529131105 21312498 + 21312478 21312518 41 GACCCTGAGGAGCAGCGGCTCATGAATCTTCTTAAACTTCT GACCCTGAGGAGCAGCGGCTCACGAATCTTCTTAAACTTCT < 41bp 0.555835110488343 0.769697261951313 0.5259672 0.23955035 prediction 0.427724302925941 Functional Gain - CRYM-AS1 ENSG00000189149 ncRNA_exonic Human bidirectional_promoter_lncRNA chr16:21312498 chr16:21312500 . . 0 23 hm5C_associated_SNPs_122691 0 0 1 GRWD1 POSTAR2 ENCODE chr16:21312441-21312576
64251 chr21 45553645 45553645 1 + C G rs150960051 45553644 + 45553624 45553664 41 ATCTGCATTCACGTCCCTGTCCCCCGGCGGTCGGACGCCTT ATCTGCATTCACGTCCCTGTCGCCCGGCGGTCGGACGCCTT < 41bp 0.402356357441596 0.713861261711923 0.15887767 0.21079436 prediction 0.427722523423847 Functional Gain - C21orf33 ENSG00000160221 CDS Human protein_coding chr21:45553644 chr21:45553645 synonymous SNV . 0 22 hm5C_associated_SNPs_122694 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45553579-45553667
64251 chr21 30411465 30411465 1 + A G PRAD 30411462 + 30411442 30411482 41 GACACCGAAAGAACTCTTTTCTCAGGTCTGTAAAAAGTGAG GACACCGAAAGAACTCTTTTCTCGGGTCTGTAAAAAGTGAG < 41bp 0.488684710836052 0.713853617040402 0.06885725 0.13812292 prediction 0.427707234080803 Functional Gain - USP16 ENSG00000156256 CDS Human protein_coding chr21:30411462 chr21:30411465 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_122697 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:30411408-30411487
64251 chr21 47965811 47965811 1 + A G UCEC 47965808 + 47965788 47965828 41 GTGCAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTT GTGCAGGCAGTTCCGGTCACCACGGGAGGAGCACCCATCTT < 41bp 0.573065317901125 0.786910698429661 0.90586185 0.9074063 prediction 0.427690761057071 Functional Gain - DIP2A ENSG00000160305 CDS Human protein_coding chr21:47965808 chr21:47965811 synonymous SNV . 0 24 hm5C_associated_SNPs_122700 0 0 5 BUD13 POSTAR2 ENCODE chr21:47965791-47965893
64251 chr17 78092070 78092070 1 + C T rs121907943 78092069 + 78092049 78092089 41 CTGACCAAGGGTGGGGAGGCCCGAGGGGAGCTGTTCTGGGA CTGACCAAGGGTGGGGAGGCCTGAGGGGAGCTGTTCTGGGA < 41bp 0.570561231679638 0.784406165927053 0.85580003 0.87091875 prediction 0.427689868494831 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78092069 chr17:78092070 stopgain 0.021 0 22 hm5C_associated_SNPs_122701 2 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:78092070-78092089
64251 chr7 129395781 129395781 1 + A G rs537613397 129395778 + 129395758 129395798 41 TGTCTTGAAAGCTCCCGGGCCTCAGCCTCCCATCTCCTCTC TGTCTTGAAAGCTCCCGGGCCTCGGCCTCCCATCTCCTCTC < 41bp 0.460692222466466 0.713839860596786 0.17695704 0.3549707 prediction 0.427679721193571 Functional Gain - NRF1 ENSG00000106459 UTR3 Human protein_coding chr7:129395778 chr7:129395781 . . 0 24 hm5C_associated_SNPs_122703 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:129395764-129395812
64251 chr6 83075636 83075636 1 + C A UCEC 83075635 + 83075615 83075655 41 GAGGTAGTGCAGGGCAAAGACCGGCTCACCTGTGCATATCC GAGGTAGTGCAGGGCAAAGACAGGCTCACCTGTGCATATCC < 41bp 0.455040981849601 0.71383962918027 0.3964975 0.8476092 prediction 0.42767925836054 Functional Gain - TPBG ENSG00000146242 CDS Human protein_coding chr6:83075635 chr6:83075636 synonymous SNV . 0 22 hm5C_associated_SNPs_122704 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr6:83075609-83075645
64251 chr8 22451274 22451274 1 + C T ESCA 22451273 + 22451253 22451293 41 GCTGTGCGCATCCAGGAGGGCCGGTACCGCCACCCCGGCTG GCTGTGCGCATCCAGGAGGGCTGGTACCGCCACCCCGGCTG < 41bp 0.472976061411987 0.713836172984148 0.37573215 0.39476362 prediction 0.427672345968296 Functional Gain - PDLIM2 ENSG00000120913;ENSG00000248235 CDS Human other chr8:22451273 chr8:22451274 nonsynonymous SNV 0.987 5 22 hm5C_associated_SNPs_122705 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:22451252-22451293
64251 chr15 68466086 68466086 1 + T A LUSC 68466082 + 68466062 68466102 41 TTTTAAAGCTTGGTAAAATGCGGCTGACAATTCCGTGTCGG TTTTAAAGCTTGGTAAAATGCGGCAGACAATTCCGTGTCGG < 41bp 0.684455555240124 0.8982844890851 0.7446192 0.8488352 prediction 0.427657867689951 Functional Gain - PIAS1 ENSG00000033800 CDS Human protein_coding chr15:68466082 chr15:68466086 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_122708 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:68466079-68466101
64251 chr2 239355312 239355312 1 + A G rs80098389 239355309 + 239355289 239355329 41 CTCCTCAGGTGCCTGGGCCGCTGAACAGTCCTTGGGTCATT CTCCTCAGGTGCCTGGGCCGCTGGACAGTCCTTGGGTCATT < 41bp 0.564809537805814 0.778636851311948 0.32409996 0.35965014 prediction 0.427654627012268 Functional Gain - ASB1 ENSG00000065802 UTR3 Human protein_coding chr2:239355309 chr2:239355312 . . 0 24 hm5C_associated_SNPs_122710 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:239355273-239355326
64251 chrX 120181965 120181965 1 + C T COAD 120181964 + 120181944 120181984 41 CGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGG CGGGCCCAGCACAGCCAGCACTGCACGCCCTGCAAGGGAGG < 41bp 0.586148474207066 0.799962757976342 0.18328753 0.28913283 prediction 0.427628567538552 Functional Gain - GLUD2 ENSG00000182890 CDS Human protein_coding chrX:120181964 chrX:120181965 nonsynonymous SNV 0.845 3 22 hm5C_associated_SNPs_122715 0 0 2 RPS3 POSTAR2 ENCODE chrX:120181887-120181981
64251 chr2 15732010 15732010 1 + T G rs200240684 15732007 + 15731987 15732027 41 CCGCCACTGCCACGCCGTGTCAGTCGGGAGGGAGGGAGCGA CCGCCACTGCCACGCCGTGTCAGGCGGGAGGGAGGGAGCGA < 41bp 0.64740328213628 0.861211523824208 0.08969742 0.8727275 prediction 0.427616483375858 Functional Gain - DDX1 ENSG00000079785 UTR5 Human protein_coding chr2:15732007 chr2:15732010 . . 0 24 hm5C_associated_SNPs_122719 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:15732000-15732020
64251 chr3 12544934 12544934 1 + T C UCS 12544932 + 12544912 12544952 41 AACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGG AACTCTGGAATGGTTTCCAACACGGAAGGCACAGCAGGGGG < 41bp 0.62037766874047 0.83418505586446 0.33621842 0.2046836 prediction 0.42761477424798 Functional Gain - TSEN2 ENSG00000154743 CDS Human protein_coding chr3:12544932 chr3:12544934 nonsynonymous SNV 0.015 0 23 hm5C_associated_SNPs_122720 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:12544930-12544985
64251 chr20 18744204 18744204 1 + C G rs16979614 18744200 + 18744180 18744220 41 GTGGAGTGATGCAGTGGGCACTGCCGGTGGGCCAGGGGGCG GTGGAGTGATGCAGTGGGCACTGCGGGTGGGCCAGGGGGCG < 41bp 0.654029222969267 0.867827064957404 0.2438474 0.39316133 prediction 0.427595683976274 Functional Gain - DTD1 ENSG00000125821 UTR3 Human protein_coding chr20:18744200 chr20:18744204 . . 0 25 hm5C_associated_SNPs_122721 0 0 4 SUB1 POSTAR2 ENCODE chr20:18744165-18744214
64251 chr17 66303785 66303785 1 + C T LAML 66303784 + 66303764 66303804 41 GATGACATGGGGTGGGGTGACCTGGGAGCAAACTGGGCAGA GATGACATGGGGTGGGGTGACTTGGGAGCAAACTGGGCAGA < 41bp 0.470665362768949 0.713787323211293 0.891998 0.9000553 prediction 0.427574646422586 Functional Gain - ARSG ENSG00000141337 CDS Human protein_coding chr17:66303784 chr17:66303785 synonymous SNV . 0 22 hm5C_associated_SNPs_122726 0 0 1 EIF3H POSTAR2 ENCODE chr17:66303751-66303809
64251 chr5 141318178 141318178 1 + C G rs10056676 141318174 + 141318154 141318194 41 AACACCCTGCTAGCAGGAACCTCACGCCTACCACATGCCTC AACACCCTGCTAGCAGGAACCTCAGGCCTACCACATGCCTC < 41bp 0.423771100934654 0.713779015075477 0.049335152 0.28896105 prediction 0.427558030150954 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141318174 chr5:141318178 nonsynonymous SNV 0.028 0 25 hm5C_associated_SNPs_122729 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917673 chr5:141318176-141318195
64251 chr17 1636945 1636945 1 + C T rs146469235 1636944 + 1636924 1636964 41 GGAGCCCACCATGCCCGGCACCGGGCCCGAGTGGGACCCCC GGAGCCCACCATGCCCGGCACTGGGCCCGAGTGGGACCCCC < 41bp 0.542823092256916 0.756583661298381 0.73887897 0.43268183 prediction 0.427521138082931 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1636944 chr17:1636945 synonymous SNV . 0 22 hm5C_associated_SNPs_122739 0 0 1 PPIG POSTAR2 ENCODE chr17:1636893-1636953
64251 chr19 21203592 21203592 1 + C G rs73546306 21203591 + 21203571 21203611 41 ACAGCTAAGACGCCAGGAACCCCTGGAAGCCTAGAAATGGT ACAGCTAAGACGCCAGGAACCGCTGGAAGCCTAGAAATGGT < 41bp 0.497814769006259 0.713755370279873 0.09200323 0.2327452 prediction 0.427510740559745 Functional Gain - ZNF430 ENSG00000118620 UTR5 Human protein_coding chr19:21203591 chr19:21203592 . . 0 22 hm5C_associated_SNPs_122741 0 0 1 NCBP2 POSTAR2 ENCODE chr19:21203455-21203615
64251 chr15 40707679 40707679 1 + C T SKCM 40707678 + 40707658 40707698 41 GGCCAGAAGATCGGCCACTTCCAGGTGAGCCGAGTGCTTTT GGCCAGAAGATCGGCCACTTCTAGGTGAGCCGAGTGCTTTT < 41bp 0.608954007265602 0.822705070229849 0.89267194 0.5887833 prediction 0.427502125928494 Functional Gain - IVD ENSG00000128928 CDS Human protein_coding chr15:40707678 chr15:40707679 stopgain 0.991 1 22 hm5C_associated_SNPs_122745 0 0 5 BUD13 POSTAR2 ENCODE chr15:40707588-40707689
64251 chr16 89799778 89799778 1 + C A BLCA 89799777 + 89799757 89799797 41 AACCAAGAATTCGGAAGAAGCCGGGACCCAAGCCCGGATGG AACCAAGAATTCGGAAGAAGCAGGGACCCAAGCCCGGATGG < 41bp 0.62091834129868 0.834664069431529 0.9083707 0.91877717 prediction 0.4274914562657 Functional Gain - ZNF276 ENSG00000158805 CDS Human protein_coding chr16:89799777 chr16:89799778 nonsynonymous SNV 0.773 4 22 hm5C_associated_SNPs_122747 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:89799734-89799784
64251 chr16 30990508 30990508 1 + C G KICH 30990507 + 30990487 30990527 41 CCAGTGCGCCTCTGCGTCCCCCAGAACCACCTGCTGGGCCC CCAGTGCGCCTCTGCGTCCCCGAGAACCACCTGCTGGGCCC < 41bp 0.675068134526413 0.888806752158226 0.3979953 0.91028166 prediction 0.427477235263626 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990507 chr16:30990508 nonsynonymous SNV 0.023 2 22 hm5C_associated_SNPs_122750 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:30990481-30990508
64251 chr16 30976484 30976484 1 + A G UCEC 30976481 + 30976461 30976501 41 CCGCTCTGGCTCCCCAGCCCCGGAGACCACCAATGAGAGTG CCGCTCTGGCTCCCCAGCCCCGGGGACCACCAATGAGAGTG < 41bp 0.458750330959483 0.713737542718222 0.9319667 0.9372729 prediction 0.427475085436443 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30976481 chr16:30976484 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_122751 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30976466-30976504
64251 chr19 16628954 16628954 1 - G C rs1043564 16628955 - 16628935 16628975 41 ACCGTTGGGAATCGGCCACACCTGGTGTCCATGGGCAGCCT ACCGTTGGGAATCGGCCACACGTGGTGTCCATGGGCAGCCT < 41bp 0.435806537579715 0.713735596599665 0.16863033 0.3598116 prediction 0.42747119319933 Functional Gain - C19orf44;CHERP ENSG00000085872;ENSG00000105072 UTR3 Human other chr19:16628955 chr19:16628954 . . 0 22 hm5C_associated_SNPs_122754 0 0 12 FXR2 POSTAR2 GSE39682,GSM977620 chr19:16628914-16628960
64251 chr1 146650074 146650074 1 + C T rs183442614 146650073 + 146650053 146650093 41 GCTGATGGAATTGTCAGCCACCTGAAGAAGCAGGCAGGCCC GCTGATGGAATTGTCAGCCACTTGAAGAAGCAGGCAGGCCC < 41bp 0.576555548911141 0.790275962976355 0.7561368 0.7334092 prediction 0.427440828130429 Functional Gain - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650073 chr1:146650074 . . 0 22 hm5C_associated_SNPs_122758 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:146650063-146650084
64251 chr9 15423928 15423928 1 + T C COAD 15423926 + 15423906 15423946 41 GCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCA GCCTTGATAAACTGAAATGCCTCGAGGACGGTGAGGATCCA < 41bp 0.665053598635716 0.878769183634568 0.06986785 0.28666863 prediction 0.427431169997704 Functional Gain - SNAPC3 ENSG00000164975 CDS Human protein_coding chr9:15423926 chr9:15423928 synonymous SNV . 0 23 hm5C_associated_SNPs_122760 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:15423921-15423940
64251 chr8 26492304 26492304 1 + C T HNSC 26492303 + 26492283 26492323 41 TGCTGTTTTGCAGGTCGAGGCCGAAGCCGTGAATCGTGCCA TGCTGTTTTGCAGGTCGAGGCTGAAGCCGTGAATCGTGCCA < 41bp 0.467867803387601 0.713712559719959 0.34914213 0.29973733 prediction 0.427425119439918 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26492303 chr8:26492304 synonymous SNV . 0 22 hm5C_associated_SNPs_122762 0 0 5 FUS POSTAR2 GSE40653,GSM998875 chr8:26492300-26492320
64251 chr11 64853951 64853951 1 + C T CESC 64853950 + 64853930 64853970 41 ACCCCGAAACACGGCACCTGCCGGCTATCAGTGCCCCAGCT ACCCCGAAACACGGCACCTGCTGGCTATCAGTGCCCCAGCT < 41bp 0.596959595193859 0.810669828148831 0.1794996 0.096944064 prediction 0.427420465909945 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64853950 chr11:64853951 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_122763 0 0 1 IGF2BP2 POSTAR2 ENCODE chr11:64853913-64854030
64251 chrX 103045503 103045503 1 + A G STAD 103045500 + 103045480 103045520 41 ACAACTTTGCCGTCCTTAAACTCATGGGCCGAGGCACCAAG ACAACTTTGCCGTCCTTAAACTCGTGGGCCGAGGCACCAAG < 41bp 0.564950243465975 0.778647267008668 0.04659009 0.11145252 prediction 0.427394047085386 Functional Gain - PLP1 ENSG00000123560 CDS Human protein_coding chrX:103045500 chrX:103045503 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_122769 0 0 2 MBNL2 POSTAR2 GSE68890,GSM1685415 chrX:103045460-103045540
64251 chr16 842344 842344 1 + C T STAD 842343 + 842323 842363 41 CGATGAGATCGACGGGGCCCCCGTGGTGGGCTCCTTGATGC CGATGAGATCGACGGGGCCCCTGTGGTGGGCTCCTTGATGC < 41bp 0.491507768707403 0.713693167729649 0.30944687 0.21335357 prediction 0.427386335459299 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:842343 chr16:842344 synonymous SNV . 0 22 hm5C_associated_SNPs_122770 0 0 4 DDX24 POSTAR2 ENCODE chr16:842301-842348
64251 chr22 19118994 19118994 1 - T C HNSC 19118997 - 19118977 19119017 41 CTTGAGGCGCTCAGAGTAGGCAGATTTGACTTTTGCGTAGG CTTGAGGCGCTCAGAGTAGGCAGGTTTGACTTTTGCGTAGG < 41bp 0.525242656939091 0.738930930174027 0.8539412 0.89594305 prediction 0.427376546469873 Functional Gain - TSSK2 ENSG00000206203 CDS Human protein_coding chr22:19118997 chr22:19118994 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_122771 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19118953-19119023
64251 chr11 6413366 6413366 1 + C T rs72896268 6413365 + 6413345 6413385 41 TTGGGAGCCCTGGCTGCCTGCCGAAGCCCTGCGCACCCTCA TTGGGAGCCCTGGCTGCCTGCTGAAGCCCTGCGCACCCTCA < 41bp 0.57228399291497 0.785966310429996 0.4598288 0.245098 prediction 0.427364635030052 Functional Gain - SMPD1 ENSG00000166311 CDS Human protein_coding chr11:6413365 chr11:6413366 synonymous SNV . 0 22 hm5C_associated_SNPs_122775 2 0 1 SND1 POSTAR2 ENCODE chr11:6413320-6413381
64251 chr19 54969164 54969164 1 + C A UCEC 54969163 + 54969143 54969183 41 GAGGTGTACGAGACCCATGCCCGGATCGCCTTGGAGAAGGT GAGGTGTACGAGACCCATGCCAGGATCGCCTTGGAGAAGGT < 41bp 0.444834193580259 0.713670718855739 0.11166069 0.7725096 prediction 0.427341437711478 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54969163 chr19:54969164 synonymous SNV . 0 22 hm5C_associated_SNPs_122778 0 0 12 BUD13 POSTAR2 ENCODE chr19:54969129-54969181
64251 chr7 6193579 6193579 1 + C T STAD 6193578 + 6193558 6193598 41 GGAGGCCATGGCCGTCGCCCCCGAGGAGCCTCCGCCCAGCG GGAGGCCATGGCCGTCGCCCCTGAGGAGCCTCCGCCCAGCG < 41bp 0.566329149063687 0.779997425575435 0.36706936 0.4095209 prediction 0.427336553023496 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6193578 chr7:6193579 synonymous SNV . 0 22 hm5C_associated_SNPs_122780 0 0 1 FXR2 POSTAR2 ENCODE chr7:6193547-6193618
64251 chr17 38346943 38346943 1 + C T KICH 38346942 + 38346922 38346962 41 CCTGGAGACACAGAGATCCACCGAGTGGAGCCTGAGGACGT CCTGGAGACACAGAGATCCACTGAGTGGAGCCTGAGGACGT < 41bp 0.456025491882555 0.713665916260804 0.7060214 0.7924709 prediction 0.427331832521607 Functional Gain - RAPGEFL1 ENSG00000108352 CDS Human protein_coding chr17:38346942 chr17:38346943 stopgain 0.991 0 22 hm5C_associated_SNPs_122781 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:38346940-38346960
64251 chr1 116941337 116941337 1 + A G KIRP 116941334 + 116941314 116941354 41 TGCTATGGGGATTGCTGGCTCAGATGTGTCCAAGCAAGCTG TGCTATGGGGATTGCTGGCTCAGGTGTGTCCAAGCAAGCTG < 41bp 0.468378400968502 0.713665203890898 0.27014816 0.86060953 prediction 0.427330407781797 Functional Gain - ATP1A1 ENSG00000163399 CDS Human protein_coding chr1:116941334 chr1:116941337 nonsynonymous SNV 0.994 5 24 hm5C_associated_SNPs_122782 0 0 23 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:116941280-116941388
64251 chr3 52523677 52523677 1 + C T SKCM 52523676 + 52523656 52523696 41 AGCGCCATCATCGAGCTCTTCCACAGCAGCATTGCTGAGGT AGCGCCATCATCGAGCTCTTCTACAGCAGCATTGCTGAGGT < 41bp 0.451234191339317 0.713660625534561 0.30421543 0.90323967 prediction 0.427321251069121 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52523676 chr3:52523677 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_122784 0 0 1 RBM15 POSTAR2 ENCODE chr3:52523671-52523708
64251 chr17 1943099 1943099 1 + C G rs80150196 1943098 + 1943078 1943118 41 AGTCTGTCATGATTGCCAACCCCAATGTCCCCGCTTACCGG AGTCTGTCATGATTGCCAACCGCAATGTCCCCGCTTACCGG < 41bp 0.392067359271487 0.713644310642669 0.56461644 0.1600497 prediction 0.427288621285338 Functional Gain - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1943098 chr17:1943099 nonsynonymous SNV 0.834 4 22 hm5C_associated_SNPs_122790 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:1943050-1943107
64251 chr19 1254389 1254389 1 + C G rs373111260 1254385 + 1254365 1254405 41 TGTCCAGTGCCGCCCGAGTCCCCCCGGTGCCCACCAGCCCG TGTCCAGTGCCGCCCGAGTCCCCCGGGTGCCCACCAGCCCG < 41bp 0.426829178839881 0.71363467279783 0.09213954 0.10962078 prediction 0.427269345595661 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254385 chr19:1254389 nonsynonymous SNV 0.004 1 25 hm5C_associated_SNPs_122794 0 0 1 FXR2 POSTAR2 ENCODE chr19:1254374-1254409
64251 chr7 132412443 132412443 1 + A G UCEC 132412440 + 132412420 132412460 41 CTGTGCTCCTTGGAGAAGATCTGAGCTCTTCTGGTTGGAAT CTGTGCTCCTTGGAGAAGATCTGGGCTCTTCTGGTTGGAAT < 41bp 0.461929786532017 0.713630042340809 0.18958431 0.7447429 prediction 0.427260084681617 Functional Gain - FLJ40288 ENSG00000183470 CDS Human lincRNA chr7:132412440 chr7:132412443 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_122798 0 0 1 HNRNPC POSTAR2 SRX1438577 chr7:132412440-132412460
64251 chr5 140595972 140595972 1 + A G PRAD 140595969 + 140595949 140595989 41 GAGGTGTGTCTGGCAGGAGGCTCAGGGACCAATGAGTTCAA GAGGTGTGTCTGGCAGGAGGCTCGGGGACCAATGAGTTCAA < 41bp 0.573685068448308 0.78730563160941 0.6844373 0.8052161 prediction 0.427241126322204 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140595969 chr5:140595972 synonymous SNV . 0 24 hm5C_associated_SNPs_122802 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:140595945-140595984
64251 chr2 111881427 111881427 1 + C T SKCM 111881426 + 111881406 111881446 41 CAGACCTGGGGCCCCTACCTCCCTACAGACAGAGCCACAAG CAGACCTGGGGCCCCTACCTCTCTACAGACAGAGCCACAAG < 41bp 0.460821752131898 0.713612532411848 0.16343278 0.92232025 prediction 0.427225064823696 Functional Gain - BCL2L11 ENSG00000153094 CDS Human protein_coding chr2:111881426 chr2:111881427 synonymous SNV . 0 22 hm5C_associated_SNPs_122805 0 0 2 GRWD1 POSTAR2 ENCODE chr2:111881346-111881432
64251 chr2 27305987 27305987 1 + C T SKCM 27305986 + 27305966 27306006 41 GCAGCTGCGGCTGGTGGGCTCCGGCCTGCACACGGTGGAAG GCAGCTGCGGCTGGTGGGCTCTGGCCTGCACACGGTGGAAG < 41bp 0.529121052482674 0.742726728541589 0.6353932 0.41149068 prediction 0.42721135211783 Functional Gain - EMILIN1 ENSG00000138080 CDS Human protein_coding chr2:27305986 chr2:27305987 synonymous SNV . 0 22 hm5C_associated_SNPs_122806 0 0 6 GRSF1 POSTAR2 ENCODE chr2:27305959-27306073
64251 chr17 6919973 6919973 1 + C T CESC 6919972 + 6919952 6919992 41 CAGCTCCAGTGTCCCTGAGGCCGGGGGTCCCCCCATAAAGA CAGCTCCAGTGTCCCTGAGGCTGGGGGTCCCCCCATAAAGA < 41bp 0.593943809977205 0.807548101384321 0.24960876 0.130299 prediction 0.427208582814232 Functional Gain - C17orf49 ENSG00000161939;ENSG00000258315 CDS Human other chr17:6919972 chr17:6919973 synonymous SNV . 0 22 hm5C_associated_SNPs_122807 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr17:6919958-6919991
64251 chr7 64853813 64853813 1 + A G LUSC 64853810 + 64853790 64853830 41 CATGAGATGGTAGACAAAACCCCAGGTAGGTGACAGTTAAT CATGAGATGGTAGACAAAACCCCGGGTAGGTGACAGTTAAT < 41bp 0.523069662386158 0.73667007324988 0.24972317 0.44368696 prediction 0.427200821727445 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64853810 chr7:64853813 synonymous SNV . 0 24 hm5C_associated_SNPs_122810 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:64853761-64853827
64251 chr17 15902823 15902823 1 - G C rs200004394 15902824 - 15902804 15902844 41 AGAGCGCGCGAAGTACGGGACCGAGGTCGTGTGTGGCTGCG AGAGCGCGCGAAGTACGGGACGGAGGTCGTGTGTGGCTGCG < 41bp 0.667614623004316 0.8812138007827 0.40600514 0.6564324 prediction 0.427198355556766 Functional Gain - TTC19 ENSG00000011295;ENSG00000214941 CDS Human other chr17:15902824 chr17:15902823 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_122813 2 0 1 PRPF8 POSTAR2 ENCODE chr17:15902768-15902841
64251 chr2 191745592 191745592 1 + C G rs556311383 191745591 + 191745571 191745611 41 AGAGAACCGGTCGCGGCAATCCTAGCGCGCAGCAGCAGCAG AGAGAACCGGTCGCGGCAATCGTAGCGCGCAGCAGCAGCAG < 41bp 0.425790353900448 0.713598894936686 0.6209434 0.9060829 prediction 0.427197789873372 Functional Gain - GLS ENSG00000235852 ncRNA_exonic Human antisense chr2:191745591 chr2:191745592 . . 0 22 hm5C_associated_SNPs_122814 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819214 chr2:191745591-191745592
64251 chr2 100007020 100007020 1 + C T STAD 100007019 + 100006999 100007039 41 CCTTTTAGGTTAAAGCTCTCCCGGGGATGGGCACCACTATA CCTTTTAGGTTAAAGCTCTCCTGGGGATGGGCACCACTATA < 41bp 0.561086504237492 0.774683913631267 0.78954136 0.49978667 prediction 0.427194818787551 Functional Gain - EIF5B ENSG00000158417 CDS Human protein_coding chr2:100007019 chr2:100007020 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_122816 0 0 4 SRRM4 POSTAR2 GSE57278,GSM1378376 chr2:100007020-100007040
64251 chr19 10541625 10541625 1 + C A SKCM 10541624 + 10541604 10541644 41 GTTCCTGCCCGAGCCCCTGGCCCCGCGCGCGCCCCGCCGCC GTTCCTGCCCGAGCCCCTGGCACCGCGCGCGCCCCGCCGCC < 41bp 0.484847795403626 0.713593926192275 0.31402236 0.48567608 prediction 0.42718785238455 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10541624 chr19:10541625 synonymous SNV . 0 22 hm5C_associated_SNPs_122817 0 0 2 DDX3X POSTAR2 ENCODE chr19:10541470-10541658
64251 chr22 46722400 46722400 1 + T C rs140054 46722398 + 46722378 46722418 41 ACCACAAAGCCTGCTGAGCGCATGGCGTGTGTCAGCCTTGC ACCACAAAGCCTGCTGAGCGCACGGCGTGTGTCAGCCTTGC < 41bp 0.600875674986006 0.814456824357419 0.32472318 0.337136 prediction 0.427162298742826 Functional Gain - GTSE1 ENSG00000075218 CDS Human protein_coding chr22:46722398 chr22:46722400 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_122822 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:46722376-46722400
64251 chr8 23112815 23112815 1 + C T SKCM 23112814 + 23112794 23112834 41 ACTCGCCCCTCTCCTCCCACCCCGTGGTGGCCCTGTCAGAG ACTCGCCCCTCTCCTCCCACCTCGTGGTGGCCCTGTCAGAG < 41bp 0.435792111629206 0.713580610516616 0.03635463 0.124037355 prediction 0.427161221033233 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112814 chr8:23112815 nonsynonymous SNV 0.963 3 22 hm5C_associated_SNPs_122823 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:23112780-23112825
64251 chr1 28075619 28075619 1 + C T SKCM 28075618 + 28075598 28075638 41 TCTTCAATTCAAAATGAAATCCCAAAGAAAAAGTCCAAGTT TCTTCAATTCAAAATGAAATCTCAAAGAAAAAGTCCAAGTT < 41bp 0.449014990723563 0.713563435474989 0.117295355 0.24380776 prediction 0.427126870949978 Functional Gain - FAM76A ENSG00000009780 CDS Human protein_coding chr1:28075618 chr1:28075619 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_122829 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:28075618-28075619
64251 chr20 62522285 62522285 1 + T G rs45555740 62522282 + 62522262 62522302 41 AAGAACTGTGCCCCCCTTCTCAGTGCTGCCTTTGCATGGGC AAGAACTGTGCCCCCCTTCTCAGGGCTGCCTTTGCATGGGC < 41bp 0.700263177372127 0.91382573953847 0.8246329 0.9624032 prediction 0.427125124332687 Functional Gain - TPD52L2 ENSG00000101150 UTR3 Human protein_coding chr20:62522282 chr20:62522285 . . 0 24 hm5C_associated_SNPs_122830 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917674 chr20:62522258-62522296
64251 chr11 76572065 76572065 1 + C G rs138662843 76572061 + 76572041 76572081 41 AGAGGGCTACTGGGGCCCCACGACCTCCACGCTGGACTGGT AGAGGGCTACTGGGGCCCCACGACGTCCACGCTGGACTGGT < 41bp 0.431085528712416 0.713541476488015 0.23585016 0.81137526 prediction 0.42708295297603 Functional Gain - ACER3 ENSG00000078124 CDS Human protein_coding chr11:76572061 chr11:76572065 synonymous SNV . 0 25 hm5C_associated_SNPs_122837 0 0 3 DDX3X POSTAR2 ENCODE chr11:76571941-76572115
64251 chrX 51637831 51637831 1 + C T LUSC 51637830 + 51637810 51637850 41 GACCCCCCTTATTCTCAACTCCGCGATCCGCCTGCCGTCCT GACCCCCCTTATTCTCAACTCTGCGATCCGCCTGCCGTCCT < 41bp 0.570008000736314 0.783548891303899 0.12991178 0.050831705 prediction 0.427081781135169 Functional Gain - MAGED1 ENSG00000179222 CDS Human protein_coding chrX:51637830 chrX:51637831 nonsynonymous SNV 0.199 1 22 hm5C_associated_SNPs_122838 0 0 2 PCBP2 POSTAR2 ENCODE chrX:51637758-51637840
64251 chr20 3631153 3631153 1 + A G rs114103131 3631150 + 3631130 3631170 41 GACGGCAGAGGCCTCCTGGCCTCAGGGCATGCCCTGCCTAC GACGGCAGAGGCCTCCTGGCCTCGGGGCATGCCCTGCCTAC < 41bp 0.51988746547741 0.733428127170412 0.06598842 0.24414855 prediction 0.427081323386003 Functional Gain - ATRN ENSG00000088812 UTR3 Human protein_coding chr20:3631150 chr20:3631153 . . 0 24 hm5C_associated_SNPs_122839 0 0 3 FAM120A POSTAR2 ENCODE chr20:3631110-3631168
64251 chr19 10822955 10822955 1 + C T SKCM 10822954 + 10822934 10822974 41 TCGGCTGCCGAAGGACAAGCCCCGATATCTGATGGGGGTTG TCGGCTGCCGAAGGACAAGCCTCGATATCTGATGGGGGTTG < 41bp 0.615968482424783 0.829503147192589 0.32132214 0.8948135 prediction 0.427069329535612 Functional Gain - QTRT1 ENSG00000213339 CDS Human protein_coding chr19:10822954 chr19:10822955 synonymous SNV . 0 22 hm5C_associated_SNPs_122843 0 0 3 PPIG POSTAR2 ENCODE chr19:10822893-10822955
64251 chr12 6638758 6638758 1 + C A THCA 6638757 + 6638737 6638777 41 TGTCAGCGGTTCCGCACATCCCGGTATGCTGCCCTCCCTGA TGTCAGCGGTTCCGCACATCCAGGTATGCTGCCCTCCCTGA < 41bp 0.629389819168929 0.842919832910606 0.58096766 0.88195807 prediction 0.427060027483354 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6638757 chr12:6638758 synonymous SNV . 0 22 hm5C_associated_SNPs_122845 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:6638728-6638759
64251 chr7 38417998 38417998 1 + C A rs79994302 38417994 + 38417974 38418014 41 AGTTAGGACTTATGTTAGAGCCAGCCTGCCTGGGGCACAGC AGTTAGGACTTATGTTAGAGCCAGACTGCCTGGGGCACAGC < 41bp 0.334748021246119 0.71350721308088 0.25462788 0.55194515 prediction 0.427014426161759 Functional Gain - TRG-AS1 ENSG00000211701;ENSG00000078053 intergenic Human other chr7:38417994 chr7:38417998 . . 0 25 hm5C_associated_SNPs_122855 0 0 1 UPF1 POSTAR2 ENCODE chr7:38417971-38418095
64251 chr18 19209067 19209067 1 + C T STAD 19209066 + 19209046 19209086 41 GGAAGAGGAAGAGGACGTGGCCGTGGCAGAGGAAGAGGGGG GGAAGAGGAAGAGGACGTGGCTGTGGCAGAGGAAGAGGGGG < 41bp 0.519796009839254 0.73330073747071 0.33369938 0.26073653 prediction 0.427009455262913 Functional Gain - SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19209066 chr18:19209067 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_122856 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:19209029-19209076
64251 chr8 145161278 145161278 1 + A G COAD 145161275 + 145161255 145161295 41 GCAGTCAACTGCAGTCTGTTCTCAGCTGTGCGGGAGGACTT GCAGTCAACTGCAGTCTGTTCTCGGCTGTGCGGGAGGACTT < 41bp 0.589365220134192 0.802869773495947 0.09340677 0.15071857 prediction 0.427009106723511 Functional Gain - MAF1 ENSG00000179632 CDS Human protein_coding chr8:145161275 chr8:145161278 synonymous SNV . 0 24 hm5C_associated_SNPs_122857 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr8:145161254-145161285
64251 chr5 140475679 140475679 1 + C T COAD 140475678 + 140475658 140475698 41 CGGGACACCCAGGCTGAAAACCGAGCACAACATAACCGTGC CGGGACACCCAGGCTGAAAACTGAGCACAACATAACCGTGC < 41bp 0.512427387616529 0.72592618412408 0.5113645 0.1634551 prediction 0.426997593015104 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475678 chr5:140475679 synonymous SNV . 0 22 hm5C_associated_SNPs_122862 0 0 1 SND1 POSTAR2 ENCODE chr5:140475642-140475679
64251 chr19 14184611 14184611 1 + C A rs142911990 14184607 + 14184587 14184627 41 CAGGAGGTGCGCGCCGTGCGCGAGCGCGAGCAGGAACTGCA CAGGAGGTGCGCGCCGTGCGCGAGAGCGAGCAGGAACTGCA < 41bp 0.710046454218887 0.923543177486621 0.87303543 0.89427865 prediction 0.426993446535467 Functional Gain - MISP3 ENSG00000141854 CDS Human protein_coding chr19:14184607 chr19:14184611 nonsynonymous SNV 0.990 2 25 hm5C_associated_SNPs_122865 0 0 1 DDX55 POSTAR2 ENCODE chr19:14184579-14184638
64251 chrX 11785254 11785254 1 + C T rs756410092 11785253 + 11785233 11785273 41 CTGACTTGTTGATTGTGTCACCCCATCACAGCTCAGTGTTG CTGACTTGTTGATTGTGTCACTCCATCACAGCTCAGTGTTG < 41bp 0.522063836321139 0.73555624351141 0.078778595 0.94768894 prediction 0.426984814380541 Functional Gain - MSL3 ENSG00000005302 UTR3 Human protein_coding chrX:11785253 chrX:11785254 . . 0 22 hm5C_associated_SNPs_122867 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chrX:11785205-11785263
64251 chr6 112671387 112671387 1 + C T SKCM 112671386 + 112671366 112671406 41 GGGAGAGGTGAAGTCATGGTCCCTGGGCGTCTGCAAGGAGC GGGAGAGGTGAAGTCATGGTCTCTGGGCGTCTGCAAGGAGC < 41bp 0.469344355517954 0.713488896647222 0.1400074 0.20572755 prediction 0.426977793294443 Functional Gain - RFPL4B ENSG00000251258 CDS Human protein_coding chr6:112671386 chr6:112671387 synonymous SNV . 0 22 hm5C_associated_SNPs_122870 0 0 1 SND1 POSTAR2 ENCODE chr6:112671349-112671446
64251 chr15 41523643 41523643 1 + C A ACC 41523642 + 41523622 41523662 41 CGAGGAGATCAAGAAGGAGACCGGCTGTGAGTTCGGGTTGG CGAGGAGATCAAGAAGGAGACAGGCTGTGAGTTCGGGTTGG < 41bp 0.604849394608573 0.818332178410039 0.76554894 0.7146565 prediction 0.426965567602933 Functional Gain - CHP1 ENSG00000187446 CDS Human protein_coding chr15:41523642 chr15:41523643 synonymous SNV . 0 22 hm5C_associated_SNPs_122871 0 0 4 DDX3X POSTAR2 ENCODE chr15:41523591-41523648
64251 chr3 14711556 14711556 1 + T C THYM 14711554 + 14711534 14711574 41 AGGAGAGGAAGGACACCAAGCCTGGAGTGCCACACATCCGG AGGAGAGGAAGGACACCAAGCCCGGAGTGCCACACATCCGG < 41bp 0.436172491960564 0.713480873084525 0.39297605 0.733662 prediction 0.42696174616905 Functional Gain - CCDC174 ENSG00000154781 CDS Human protein_coding chr3:14711554 chr3:14711556 synonymous SNV . 0 23 hm5C_associated_SNPs_122872 0 0 5 BUD13 POSTAR2 ENCODE chr3:14711543-14711587
64251 chr5 118788196 118788196 1 + C A rs26180 118788195 + 118788175 118788215 41 CTCGTCCCGCCCCCGCCATTCCCCGCCTCCTCCTGTCCCGC CTCGTCCCGCCCCCGCCATTCACCGCCTCCTCCTGTCCCGC < 41bp 0.472354575180194 0.713475190870567 0.06163597 0.11486259 prediction 0.426950381741134 Functional Gain - HSD17B4 ENSG00000133835 UTR5 Human protein_coding chr5:118788195 chr5:118788196 . . 0 22 hm5C_associated_SNPs_122875 0 0 1 NCBP2 POSTAR2 ENCODE chr5:118788193-118788239
64251 chr10 85901294 85901294 1 + C G SKCM 85901290 + 85901270 85901310 41 GGCTGGTGTGTCTCCGGACACTACCTTCTAGGGTTTTCCAC GGCTGGTGTGTCTCCGGACACTACGTTCTAGGGTTTTCCAC < 41bp 0.656593705503896 0.87005451033685 0.040942192 0.040046364 prediction 0.426921609665907 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85901290 chr10:85901294 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_122878 0 0 15 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:85901223-85901306
64251 chr11 44265763 44265763 1 + C T LUAD 44265762 + 44265742 44265782 41 CCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTA CCTCTCAAGGTGGTGGAACACTGAGCTGACCCTGTCCTGTA < 41bp 0.579838099860861 0.793296302668757 0.6871277 0.5230567 prediction 0.426916405615792 Functional Gain - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44265762 chr11:44265763 stopgain 0.629 1 22 hm5C_associated_SNPs_122879 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:44265717-44265775
64251 chrX 135593521 135593521 1 + C T UCEC 135593520 + 135593500 135593540 41 GGTTGGCCCCACAAAAGAGTCCGAAGAAGATGACTCAGAGA GGTTGGCCCCACAAAAGAGTCTGAAGAAGATGACTCAGAGA < 41bp 0.574589457585709 0.788044530743689 0.035345763 0.05625379 prediction 0.426910146315959 Functional Gain - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593520 chrX:135593521 synonymous SNV . 0 22 hm5C_associated_SNPs_122880 0 0 1 GRWD1 POSTAR2 ENCODE chrX:135593502-135593541
64251 chr10 22618314 22618314 1 + C T LIHC 22618313 + 22618293 22618333 41 CCTCTTCTTGTTTGCCTAGCCCCAGTACTCCAGTGCAGTCT CCTCTTCTTGTTTGCCTAGCCTCAGTACTCCAGTGCAGTCT < 41bp 0.596109606607977 0.809553033901086 0.3023758 0.024153858 prediction 0.426886854586217 Functional Gain - BMI1;COMMD3-BMI1 ENSG00000168283;ENSG00000269897 CDS Human other chr10:22618313 chr10:22618314 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_122883 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:22618275-22618324
64251 chr9 135919312 135919312 1 + C T UCEC 135919311 + 135919291 135919331 41 TACCGACCAGAGACCCAGCACCGGTAAGGCCCCCCTCCATG TACCGACCAGAGACCCAGCACTGGTAAGGCCCCCCTCCATG < 41bp 0.463689542625105 0.713439311122499 0.16044202 0.18761086 prediction 0.426878622244998 Functional Gain - GTF3C5 ENSG00000148308 CDS Human protein_coding chr9:135919311 chr9:135919312 nonsynonymous SNV 0.968 3 22 hm5C_associated_SNPs_122884 0 0 1 DDX24 POSTAR2 ENCODE chr9:135919278-135919314
64251 chr12 53681845 53681845 1 + C T SKCM 53681844 + 53681824 53681864 41 TAAGAGACGGGGCACTGCTTCCCGGGGCCGGGGGCGAGCAA TAAGAGACGGGGCACTGCTTCTCGGGGCCGGGGGCGAGCAA < 41bp 0.613995125545213 0.827431986738771 0.87573826 0.88391894 prediction 0.426873722387116 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53681844 chr12:53681845 synonymous SNV . 0 22 hm5C_associated_SNPs_122887 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:53681829-53681861
64251 chr12 13368985 13368985 1 + C G rs561037465 13368981 + 13368961 13369001 41 GATGGTAGACGAGCTGTCTGCTGCCGCAGGAGCACCTCTAT GATGGTAGACGAGCTGTCTGCTGCGGCAGGAGCACCTCTAT < 41bp 0.646722689739729 0.860150364757054 0.16279733 0.7676071 prediction 0.426855350034651 Functional Gain - EMP1 ENSG00000134531 UTR3 Human protein_coding chr12:13368981 chr12:13368985 . . 0 25 hm5C_associated_SNPs_122892 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:13368980-13369005
64251 chr6 158364775 158364775 1 + A G rs557426619 158364772 + 158364752 158364792 41 GGCCTGGGAGAAGGAGGGCACCCAGCACCCCGGCGTCTCTG GGCCTGGGAGAAGGAGGGCACCCGGCACCCCGGCGTCTCTG < 41bp 0.596086433863594 0.809506304762961 0.3233677 0.8309506 prediction 0.426839741798734 Functional Gain - SNX9 ENSG00000130340 UTR3 Human protein_coding chr6:158364772 chr6:158364775 . . 0 24 hm5C_associated_SNPs_122897 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:158364762-158364800
64251 chr19 13873196 13873196 1 + C T SKCM 13873195 + 13873175 13873215 41 CCTGACCATCCCGCTGGTGCCCGAGACGGAAGATGACCGCA CCTGACCATCCCGCTGGTGCCTGAGACGGAAGATGACCGCA < 41bp 0.465450710062104 0.713419810194644 0.4614414 0.75384915 prediction 0.426839620389288 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13873195 chr19:13873196 synonymous SNV . 0 22 hm5C_associated_SNPs_122898 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13873178-13873209
64251 chr15 101169830 101169830 1 + C T COAD 101169829 + 101169809 101169849 41 TACGGCAGGGACTCATTTGTCCGGCTCCTCCTGGAGTTCAA TACGGCAGGGACTCATTTGTCTGGCTCCTCCTGGAGTTCAA < 41bp 0.589497103689691 0.802911469395244 0.33961213 0.27373827 prediction 0.426828731411106 Functional Gain - ASB7 ENSG00000183475 CDS Human protein_coding chr15:101169829 chr15:101169830 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_122900 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr15:101169820-101169840
64251 chr1 41284214 41284214 1 + C T UCEC 41284213 + 41284193 41284233 41 GGCCTCGGTGGCCGTCATCGCCGCGGGTACCCAGGGCAACA GGCCTCGGTGGCCGTCATCGCTGCGGGTACCCAGGGCAACA < 41bp 0.580064729214911 0.793478345876863 0.90907866 0.76717544 prediction 0.426827233323904 Functional Gain - KCNQ4 ENSG00000117013 CDS Human protein_coding chr1:41284213 chr1:41284214 synonymous SNV . 0 22 hm5C_associated_SNPs_122902 0 0 1 METAP2 POSTAR2 ENCODE chr1:41284166-41284256
64251 chr15 42127377 42127377 1 + T G rs143398561 42127373 + 42127353 42127393 41 TGCCCAGCGAGCTGCCCCAGCTGCTGCCTGATCTGGAATCC TGCCCAGCGAGCTGCCCCAGCTGCGGCCTGATCTGGAATCC < 41bp 0.504195041799567 0.717597998076259 0.4013881 0.54904467 prediction 0.426805912553385 Functional Gain - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127373 chr15:42127377 nonsynonymous SNV 0.973 2 25 hm5C_associated_SNPs_122909 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:42127349-42127382
64251 chr16 334453 334453 1 + C G LUAD 334449 + 334429 334469 41 ACAGCAAGGCAGCTGCCGTGCTCGCGGCCGAGTCAATGGTG ACAGCAAGGCAGCTGCCGTGCTCGGGGCCGAGTCAATGGTG < 41bp 0.654265560128342 0.867663248820508 0.0938395 0.12330437 prediction 0.426795377384332 Functional Gain - PDIA2 ENSG00000185615 CDS Human protein_coding chr16:334449 chr16:334453 nonsynonymous SNV 0.075 1 25 hm5C_associated_SNPs_122911 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr16:334441-334468
64251 chr15 89020250 89020250 1 + C T UCEC 89020249 + 89020229 89020269 41 CAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCT CAAAAGGGCGTGATCCACATCTGAGTTGTGGTGAAAGGCCT < 41bp 0.46681412673519 0.71339735905349 0.35410285 0.3287965 prediction 0.42679471810698 Functional Gain - MRPS11 ENSG00000181991 CDS Human protein_coding chr15:89020249 chr15:89020250 stopgain 0.948 1 22 hm5C_associated_SNPs_122912 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:89020249-89020282
64251 chr6 125404223 125404223 1 + A G rs568230400 125404220 + 125404200 125404240 41 CCCAGTGATTCTCCGTGGGCCACAATGCCTCTAGCTATGGT CCCAGTGATTCTCCGTGGGCCACGATGCCTCTAGCTATGGT < 41bp 0.487876664942627 0.713395472169957 0.015900433 0.006301075 prediction 0.426790944339913 Functional Gain - RNF217 ENSG00000146373 UTR3 Human protein_coding chr6:125404220 chr6:125404223 . . 0 24 hm5C_associated_SNPs_122913 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012389 chr6:125404195-125404234
64251 chr16 68862157 68862157 1 + C T STAD 68862156 + 68862136 68862176 41 CTGCCCCCAGAGGATGACACCCGGGACAACGTTTATTACTA CTGCCCCCAGAGGATGACACCTGGGACAACGTTTATTACTA < 41bp 0.454247400957697 0.713394064002979 0.37729827 0.40911657 prediction 0.426788128005958 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68862156 chr16:68862157 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_122914 1 0 2 SND1 POSTAR2 ENCODE chr16:68862094-68862163
64251 chr17 57430801 57430801 1 + C T SKCM 57430800 + 57430780 57430820 41 ATGACAAGATCGAAGACTTTCCAGGCATATCTGCCCTCCTG ATGACAAGATCGAAGACTTTCTAGGCATATCTGCCCTCCTG < 41bp 0.593281106098054 0.806670222057217 0.39032984 0.308079 prediction 0.426778231918326 Functional Gain - YPEL2 ENSG00000175155 CDS Human protein_coding chr17:57430800 chr17:57430801 stopgain 1.000 1 22 hm5C_associated_SNPs_122916 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:57430792-57430805
64251 chr19 7505163 7505163 1 + C T SKCM 7505162 + 7505142 7505182 41 CCGCAGTCGGAGCGGGGCTTCCGCGCCGGGGACCTCCGCTA CCGCAGTCGGAGCGGGGCTTCTGCGCCGGGGACCTCCGCTA < 41bp 0.567053441207301 0.780441376800429 0.7559929 0.86947316 prediction 0.426775871186256 Functional Gain - ARHGEF18 ENSG00000104880 CDS Human protein_coding chr19:7505162 chr19:7505163 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_122917 0 0 1 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:7505144-7505164
64251 chr16 3077243 3077243 1 + C T SKCM 3077242 + 3077222 3077262 41 CCCACCACCATCTTCCCCATCCGGGCGCCACAGAAGCACGT CCCACCACCATCTTCCCCATCTGGGCGCCACAGAAGCACGT < 41bp 0.609785254933412 0.823171874231121 0.93705034 0.7736403 prediction 0.426773238595417 Functional Gain - THOC6 ENSG00000131652 CDS Human protein_coding chr16:3077242 chr16:3077243 nonsynonymous SNV 0.031 0 22 hm5C_associated_SNPs_122919 0 0 4 EWSR1 POSTAR2 SRX029343 chr16:3077211-3077244
64251 chr3 12613650 12613650 1 + C T SKCM 12613649 + 12613629 12613669 41 CAGCGACCCCCAGCCCAGCCCCGAGATGAAGCCGCATTCCT CAGCGACCCCCAGCCCAGCCCTGAGATGAAGCCGCATTCCT < 41bp 0.466501581132177 0.713375798430801 0.33016187 0.3908391 prediction 0.426751596861602 Functional Gain - MKRN2 ENSG00000075975 CDS Human protein_coding chr3:12613649 chr3:12613650 synonymous SNV . 0 22 hm5C_associated_SNPs_122926 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr3:12613615-12613656
64251 chr8 98788012 98788012 1 + C A rs114241480 98788008 + 98787988 98788028 41 ATGGCCAAGTCCGCCCCGCCCCCTCCCCGTCCCCGCCGCTG ATGGCCAAGTCCGCCCCGCCCCCTACCCGTCCCCGCCGCTG < 41bp 0.323896452503859 0.71337209425011 0.15243018 0.06154588 prediction 0.426744188500219 Functional Gain - LAPTM4B ENSG00000104341 CDS Human protein_coding chr8:98788008 chr8:98788012 synonymous SNV . 0 25 hm5C_associated_SNPs_122928 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chr8:98788005-98788028
64251 chr16 2578698 2578698 1 + C T UCEC 2578697 + 2578677 2578717 41 GCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCAC GCCCCAATGGACGTCTGTGTCTGGCACTTCCTGCAGGCCAC < 41bp 0.57590223297736 0.789273060574212 0.4738078 0.73613745 prediction 0.426741655193703 Functional Gain - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2578697 chr16:2578698 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_122929 0 0 5 BUD13 POSTAR2 ENCODE chr16:2578698-2578737
64251 chr17 65665697 65665697 1 + C A UCEC 65665693 + 65665673 65665713 41 AAGGCTGGAGAGATAGTCATCAGCCTATCATGTGCTCCTAC AAGGCTGGAGAGATAGTCATCAGCATATCATGTGCTCCTAC < 41bp 0.304431472809592 0.713369961177324 0.3766377 0.23965421 prediction 0.426739922354649 Functional Gain - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65665693 chr17:65665697 nonsynonymous SNV 0.883 3 25 hm5C_associated_SNPs_122931 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:65665652-65665704
64251 chr6 36193115 36193115 1 + C A UCEC 36193114 + 36193094 36193134 41 GAGCTGGTGTGGGCCAAGTGCCGAGGCTACCCCTCCTACCC GAGCTGGTGTGGGCCAAGTGCAGAGGCTACCCCTCCTACCC < 41bp 0.615728467207612 0.829097179141012 0.9267278 0.93291926 prediction 0.4267374238668 Functional Gain - BRPF3 ENSG00000096070 CDS Human protein_coding chr6:36193114 chr6:36193115 synonymous SNV . 0 22 hm5C_associated_SNPs_122933 0 0 1 DDX24 POSTAR2 ENCODE chr6:36193087-36193137
64251 chr5 109202637 109202637 1 + A G BRCA 109202634 + 109202614 109202654 41 TGCATTCACCTCCCGGCACTCAGAATATAAGTGAGATCAAC TGCATTCACCTCCCGGCACTCAGGATATAAGTGAGATCAAC < 41bp 0.523731741666924 0.737089871640543 0.4422561 0.8540113 prediction 0.42671625994724 Functional Gain - MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109202634 chr5:109202637 nonsynonymous SNV 0.269 1 24 hm5C_associated_SNPs_122940 0 0 1 SND1 POSTAR2 ENCODE chr5:109202597-109202659
64251 chr1 37945919 37945919 1 + C A CESC 37945918 + 37945898 37945938 41 AACAAGGAGGTCTTCTCCTGCCGGGGCATCCTGCTGGCAGT AACAAGGAGGTCTTCTCCTGCAGGGGCATCCTGCTGGCAGT < 41bp 0.633320540273064 0.846670602169359 0.9080177 0.9157015 prediction 0.42670012379259 Functional Gain - ZC3H12A ENSG00000163874 CDS Human protein_coding chr1:37945918 chr1:37945919 synonymous SNV . 0 22 hm5C_associated_SNPs_122944 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:37945907-37945930
64251 chr1 43162404 43162404 1 + C G OV 43162403 + 43162383 43162423 41 GTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCTCCA GTAACCATTATAGACGCTATCGACGTCGTAGGGGTCCTCCA < 41bp 0.396555011014463 0.713348501565777 0.21008891 0.8612725 prediction 0.426697003131555 Functional Gain - YBX1 ENSG00000065978 CDS Human protein_coding chr1:43162403 chr1:43162404 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_122945 0 0 44 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:43162398-43162425
64251 chr11 6630817 6630817 1 + T C LIHC 6630815 + 6630795 6630835 41 CCTGCTCCTCATCCTACTCTCATCACACACTGGATGCCGTA CCTGCTCCTCATCCTACTCTCACCACACACTGGATGCCGTA < 41bp 0.426283213822335 0.713346643306076 0.059317887 0.031440973 prediction 0.426693286612153 Functional Gain - ILK ENSG00000166333 CDS Human protein_coding chr11:6630815 chr11:6630817 nonsynonymous SNV 0.990 5 23 hm5C_associated_SNPs_122946 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:6630788-6630825
64251 chr7 92161757 92161757 1 + T C GBM 92161754 + 92161734 92161774 41 ATGGATGAACAGAGTTTCTTCGGTGGATTGCTTCATGTGTG ATGGATGAACAGAGTTTCTTCGGCGGATTGCTTCATGTGTG < 41bp 0.522479108710195 0.735825426045988 0.897259 0.9076698 prediction 0.426692634671586 Functional Gain - RBM48 ENSG00000127993 CDS Human protein_coding chr7:92161754 chr7:92161757 synonymous SNV . 0 24 hm5C_associated_SNPs_122947 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:92161736-92161767
64251 chr17 78973241 78973241 1 + A G rs74004812 78973238 + 78973218 78973258 41 CCCGGTGGCCGAGGCCCAGGCCCAACGCCTCTGGTGCTGTT CCCGGTGGCCGAGGCCCAGGCCCGACGCCTCTGGTGCTGTT < 41bp 0.570671199939208 0.784016634084536 0.3993721 0.4776618 prediction 0.426690868290656 Functional Gain - CHMP6 ENSG00000176108 UTR3 Human protein_coding chr17:78973238 chr17:78973241 . . 0 24 hm5C_associated_SNPs_122948 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:78973196-78973253
64251 chr17 78921115 78921115 1 + A G LUAD 78921112 + 78921092 78921132 41 GGGTCACTGCCATGGAGTATCTGAACGGCCAGGACTGCTCG GGGTCACTGCCATGGAGTATCTGGACGGCCAGGACTGCTCG < 41bp 0.576050489168113 0.789389392298102 0.7714188 0.89768213 prediction 0.426677806259976 Functional Gain - RPTOR ENSG00000141564 CDS Human protein_coding chr17:78921112 chr17:78921115 nonsynonymous SNV 0.917 4 24 hm5C_associated_SNPs_122951 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:78921100-78921120
64251 chr1 109325309 109325309 1 + A G COAD 109325306 + 109325286 109325326 41 TATGAAAGAAATTTCATCAACAAAGAAAGCAACAGAAGGAA TATGAAAGAAATTTCATCAACAAGGAAAGCAACAGAAGGAA < 41bp 0.492098156768435 0.713338031139906 0.3511252 0.40163618 prediction 0.426676062279812 Functional Gain - STXBP3 ENSG00000116266 CDS Human protein_coding chr1:109325306 chr1:109325309 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_122952 0 0 1 SF3B4 POSTAR2 ENCODE chr1:109325229-109325342
64251 chr10 51572485 51572485 1 + C A rs575423001 51572481 + 51572461 51572501 41 GCAGCTGGTGAGTCGGTGACCTGGCCTGTGAGGTACGTCTG GCAGCTGGTGAGTCGGTGACCTGGACTGTGAGGTACGTCTG < 41bp 0.70162708788305 0.914961870800079 0.44547838 0.46229511 prediction 0.426669565834059 Functional Gain - NCOA4 ENSG00000138293 UTR5 Human other chr10:51572481 chr10:51572485 . . 0 25 hm5C_associated_SNPs_122953 0 0 11 DDX3X POSTAR2 ENCODE chr10:51572429-51572492
64251 chr12 7054954 7054954 1 + T G LUSC 7054951 + 7054931 7054971 41 CAGGTGTCCTTAAGTTTGCTCGCTTGGTCAAGTCCTACGAA CAGGTGTCCTTAAGTTTGCTCGCGTGGTCAAGTCCTACGAA < 41bp 0.310899543612693 0.713324148392724 0.37406144 0.92436266 prediction 0.426648296785448 Functional Gain - C12orf57 ENSG00000111678 CDS Human protein_coding chr12:7054951 chr12:7054954 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_122959 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr12:7054934-7054972
64251 chrX 151869626 151869626 1 + C G LUAD 151869625 + 151869605 151869645 41 CCTGACCTGGAGTCTGAGTTCCAAGCAGCACTCAGTAGGAA CCTGACCTGGAGTCTGAGTTCGAAGCAGCACTCAGTAGGAA < 41bp 0.38468880550477 0.713320605856874 0.2590032 0.7657096 prediction 0.426641211713748 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151869625 chrX:151869626 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_122964 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:151869620-151869652
64251 chr5 141312854 141312854 1 + C A rs201533364 141312850 + 141312830 141312870 41 AGAACATGAAGAGTGGCGACCACACGGCAGCCTTTTCTTAC AGAACATGAAGAGTGGCGACCACAAGGCAGCCTTTTCTTAC < 41bp 0.290421882701871 0.713319338743179 0.0877105 0.1360836 prediction 0.426638677486357 Functional Gain - KIAA0141 ENSG00000081791 CDS Human protein_coding chr5:141312850 chr5:141312854 nonsynonymous SNV 0.014 0 25 hm5C_associated_SNPs_122966 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:141312840-141312862
64251 chr8 144103435 144103435 1 + C G rs4464948 144103434 + 144103414 144103454 41 ATGTGACCTTCCTTGGGGGACCGCGGAAGGGACGAGGGTTC ATGTGACCTTCCTTGGGGGACGGCGGAAGGGACGAGGGTTC < 41bp 0.663841369683608 0.877156341916785 0.82843995 0.8895194 prediction 0.426629944466354 Functional Gain - LY6E ENSG00000160932 UTR3 Human protein_coding chr8:144103434 chr8:144103435 . . 0 22 hm5C_associated_SNPs_122969 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:144103212-144103463
64251 chr19 36637107 36637107 1 + T C COAD 36637105 + 36637085 36637125 41 ACATCCATCTTAGGGTTCCACCTGAATGAGCATCTCTATAA ACATCCATCTTAGGGTTCCACCCGAATGAGCATCTCTATAA < 41bp 0.42800608727498 0.713308457123577 0.092826635 0.07936406 prediction 0.426616914247153 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36637105 chr19:36637107 nonsynonymous SNV 0.993 4 23 hm5C_associated_SNPs_122971 0 0 4 NOP58 POSTAR2 GSE43666,GSM1067861 chr19:36637100-36637120
64251 chr7 2403339 2403339 1 + C T COAD 2403338 + 2403318 2403358 41 GTGATTTTTGAGAGTGGAGACCGCACTTCCATATTCTGGAA GTGATTTTTGAGAGTGGAGACTGCACTTCCATATTCTGGAA < 41bp 0.448722143086837 0.713297623858713 0.03069511 0.036114037 prediction 0.426595247717425 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2403338 chr7:2403339 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_122975 0 0 26 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:2403331-2403355
64251 chr14 100602267 100602267 1 + C T UCEC 100602266 + 100602246 100602286 41 ATCCTAGTACCTCCCCCTCTCCGGGGACCCGAGCAGCCAGC ATCCTAGTACCTCCCCCTCTCTGGGGACCCGAGCAGCCAGC < 41bp 0.612255341306921 0.825547483693434 0.9294591 0.8743359 prediction 0.426584284773026 Functional Gain - EVL ENSG00000196405 CDS Human protein_coding chr14:100602266 chr14:100602267 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_122978 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:100602253-100602279
64251 chr6 16129590 16129590 1 + A G UCEC 16129587 + 16129567 16129607 41 TGACGAGGCCGGACGCGGTGCTGATGGAGGTGGAGGTGGAG TGACGAGGCCGGACGCGGTGCTGGTGGAGGTGGAGGTGGAG < 41bp 0.475893391289737 0.713289348018855 0.4392531 0.3656425 prediction 0.42657869603771 Functional Gain - MYLIP ENSG00000007944 CDS Human protein_coding chr6:16129587 chr6:16129590 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_122981 0 0 6 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:16129578-16129610
64251 chr19 48965285 48965285 1 + C G HNSC 48965281 + 48965261 48965301 41 TCCTGCTCCTTCCTCGCCTCCTGGCTGCTCTTCGGCCTGGC TCCTGCTCCTTCCTCGCCTCCTGGGTGCTCTTCGGCCTGGC < 41bp 0.656087237448349 0.869373378832366 0.6998613 0.8282069 prediction 0.426572282768035 Functional Gain - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48965281 chr19:48965285 nonsynonymous SNV 0.999 3 25 hm5C_associated_SNPs_122983 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:48965248-48965286
64251 chr9 138012002 138012002 1 + T C UCEC 138012000 + 138011980 138012020 41 TACAACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGTT TACAACGTGACCCTCTTCCACGCCATCCGCTCCGACGAGTT < 41bp 0.426877388884153 0.713285430166985 0.12975666 0.27357632 prediction 0.42657086033397 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138012000 chr9:138012002 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_122984 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:138011949-138012160
64251 chr20 61296364 61296364 1 + C T rs145175877 61296363 + 61296343 61296383 41 CACCGAGGCCACTCTCATCACCGGCATGTCCACGTTCAGCC CACCGAGGCCACTCTCATCACTGGCATGTCCACGTTCAGCC < 41bp 0.452762461378176 0.713277313747176 0.025272995 0.055241764 prediction 0.426554627494351 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61296363 chr20:61296364 synonymous SNV . 0 22 hm5C_associated_SNPs_122988 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:61296350-61296370
64251 chr16 66918543 66918543 1 + C T COAD 66918542 + 66918522 66918562 41 ACCAGCTGGCTGCCAATTCCCCAGTGGAGGACCGGCGAGGT ACCAGCTGGCTGCCAATTCCCTAGTGGAGGACCGGCGAGGT < 41bp 0.593097331491065 0.806371872326374 0.21855873 0.0850513 prediction 0.426549081670618 Functional Gain - PDP2 ENSG00000172840 CDS Human protein_coding chr16:66918542 chr16:66918543 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_122990 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr16:66918540-66918560
64251 chr7 138872193 138872193 1 + T C COAD 138872191 + 138872171 138872211 41 CTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAAC CTGCCAAAGCTTTTGATGTCCTCGAGAGGCTGGATCCTAAC < 41bp 0.661094722067367 0.874368990103355 0.040664017 0.27919483 prediction 0.426548536071975 Functional Gain - TTC26 ENSG00000105948 CDS Human protein_coding chr7:138872191 chr7:138872193 synonymous SNV . 0 23 hm5C_associated_SNPs_122991 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr7:138872180-138872200
64251 chr19 11473296 11473296 1 + C T rs118107242 11473295 + 11473275 11473315 41 GGTGGGCGTGGTCCGCGTGGCCGAGTACCGAAACCACTGGT GGTGGGCGTGGTCCGCGTGGCTGAGTACCGAAACCACTGGT < 41bp 0.480933005311931 0.713265341446307 0.18496844 0.1597471 prediction 0.426530682892614 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11473295 chr19:11473296 synonymous SNV . 0 22 hm5C_associated_SNPs_122994 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:11473262-11473297
64251 chr10 70775886 70775886 1 + C T CESC 70775885 + 70775865 70775905 41 TCTTAGACTCCCTGAGAGACCCAAATAAAGTATTCCCTGAG TCTTAGACTCCCTGAGAGACCTAAATAAAGTATTCCCTGAG < 41bp 0.458591225868915 0.71326242723146 0.09703809 0.1140883 prediction 0.42652485446292 Functional Gain - KIF1BP ENSG00000198954 CDS Human protein_coding chr10:70775885 chr10:70775886 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_122996 0 0 2 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:70775870-70775894
64251 chr2 272130 272130 1 + A G STAD 272127 + 272107 272147 41 GCATGAAGAGGCACGGCATTCCCATGAGCCACGTTGCCCGG GCATGAAGAGGCACGGCATTCCCGTGAGCCACGTTGCCCGG < 41bp 0.560292340046567 0.773548821351315 0.10685533 0.29486609 prediction 0.426512962609497 Functional Gain - ACP1 ENSG00000143727 CDS Human protein_coding chr2:272127 chr2:272130 nonsynonymous SNV 0.772 0 24 hm5C_associated_SNPs_123000 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:272108-272132
64251 chr18 9944934 9944934 1 + C T rs143372755 9944933 + 9944913 9944953 41 CATCTCAGGGTATAACTCCACCAGGGAATGCTCCGACTGTC CATCTCAGGGTATAACTCCACTAGGGAATGCTCCGACTGTC < 41bp 0.469521529059763 0.713251845831321 0.3875962 0.14256036 prediction 0.426503691662643 Functional Gain - VAPA ENSG00000101558 CDS Human protein_coding chr18:9944933 chr18:9944934 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123005 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr18:9944867-9944965
64251 chr11 36250785 36250785 1 + C A UCEC 36250781 + 36250761 36250801 41 TCTGAACCAAGCCGACCTGCCCCCCTACCGCTCCCGGTCCG TCTGAACCAAGCCGACCTGCCCCCATACCGCTCCCGGTCCG < 41bp 0.294659101390581 0.713250436301019 0.014147639 0.056658417 prediction 0.426500872602039 Functional Gain - LDLRAD3 ENSG00000179241 CDS Human protein_coding chr11:36250781 chr11:36250785 synonymous SNV . 0 25 hm5C_associated_SNPs_123008 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:36250756-36250795
64251 chr12 123718019 123718019 1 + C A rs577696104 123718018 + 123717998 123718038 41 GGATCGCGATTGCGAATCCTCCGCTGAGGTGATTTGGATAT GGATCGCGATTGCGAATCCTCAGCTGAGGTGATTTGGATAT < 41bp 0.467120764271083 0.713247687991582 0.14863193 0.31814694 prediction 0.426495375983165 Functional Gain - C12orf65 ENSG00000130921 UTR5 Human protein_coding chr12:123718018 chr12:123718019 . . 0 22 hm5C_associated_SNPs_123011 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr12:123718000-123718020
64251 chr15 28902457 28902457 1 + A G UCEC 28902454 + 28902434 28902474 41 GCACAAAATAAAGAAATCGACTAAACAGGCCTTTGCAGGTC GCACAAAATAAAGAAATCGACTAGACAGGCCTTTGCAGGTC < 41bp 0.550886972600708 0.764128481426848 0.26831254 0.2781503 prediction 0.42648301765228 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28902454 chr15:28902457 . . 0 24 hm5C_associated_SNPs_123014 0 0 1 PRPF8 POSTAR2 ENCODE chr15:28902445-28902510
64251 chr17 21202197 21202197 1 + C T UCEC 21202196 + 21202176 21202216 41 TTCTTTCTCCACAGACCCCCCCGGAACCTGGACTCCCGGAC TTCTTTCTCCACAGACCCCCCTGGAACCTGGACTCCCGGAC < 41bp 0.604761223627406 0.818001231084598 0.32471582 0.30459088 prediction 0.426480014914385 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21202196 chr17:21202197 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123016 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:21202189-21202224
64251 chr14 20942941 20942941 1 + C T MESO 20942940 + 20942920 20942960 41 TTTGCTTCGAAGGTGACATTCCCAGTGAGGGTTTTCCACCT TTTGCTTCGAAGGTGACATTCTCAGTGAGGGTTTTCCACCT < 41bp 0.449652255773759 0.713236715830251 0.2881239 0.26503634 prediction 0.426473431660501 Functional Gain - PNP ENSG00000198805 CDS Human protein_coding chr14:20942940 chr14:20942941 nonsynonymous SNV 0.940 5 22 hm5C_associated_SNPs_123017 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr14:20942914-20942959
64251 chr4 187066140 187066140 1 + C G rs2310391 187066139 + 187066119 187066159 41 GGGGAGCCCCAGCCCCGGGGCCGCGGGGGCGCGTGACCGGC GGGGAGCCCCAGCCCCGGGGCGGCGGGGGCGCGTGACCGGC < 41bp 0.639646202927249 0.852878797236974 0.6126826 0.8666016 prediction 0.42646518861945 Functional Gain - FAM149A ENSG00000109794 UTR5 Human protein_coding chr4:187066139 chr4:187066140 . . 0 22 hm5C_associated_SNPs_123019 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr4:187066139-187066140
64251 chr16 3334113 3334113 1 + A G LIHC 3334110 + 3334090 3334130 41 CCATCCTGCCCCAGGAGATCCAGAGCAGGGTGCAGGAGCTG CCATCCTGCCCCAGGAGATCCAGGGCAGGGTGCAGGAGCTG < 41bp 0.596342587168269 0.809572188476968 0.6243769 0.7935728 prediction 0.426459202617399 Functional Gain - ZNF263 ENSG00000006194 CDS Human protein_coding chr16:3334110 chr16:3334113 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_123021 0 0 3 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr16:3334112-3334136
64251 chr16 66643358 66643358 1 + C T UCEC 66643357 + 66643337 66643377 41 GGACTTCCTGCGCTGTGTCACCGCGGCCCTCATCTACTTTG GGACTTCCTGCGCTGTGTCACTGCGGCCCTCATCTACTTTG < 41bp 0.600454096618718 0.813678305356583 0.6230899 0.2929917 prediction 0.42644841747573 Functional Gain - CMTM3 ENSG00000140931 CDS Human protein_coding chr16:66643357 chr16:66643358 synonymous SNV . 0 22 hm5C_associated_SNPs_123023 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:66643353-66643377
64251 chr1 57378088 57378088 1 + C T DLBC 57378087 + 57378067 57378107 41 TGCCCACAGATGCAGCCTATCCACGAGGTGCTGCGGCACAC TGCCCACAGATGCAGCCTATCTACGAGGTGCTGCGGCACAC < 41bp 0.593946757549678 0.807168464035537 0.19037291 0.17717656 prediction 0.426443412971717 Functional Gain - C8A ENSG00000157131 CDS Human protein_coding chr1:57378087 chr1:57378088 nonsynonymous SNV 0.011 1 22 hm5C_associated_SNPs_123024 0 0 1 U2AF2 POSTAR2 ENCODE chr1:57378062-57378124
64251 chr6 7585736 7585736 1 + C A LUSC 7585735 + 7585715 7585755 41 AGTGCATGGGAGGATAAGCACCGAAGAAGCCATCCGGAAGG AGTGCATGGGAGGATAAGCACAGAAGAAGCCATCCGGAAGG < 41bp 0.606397902980027 0.819604434481927 0.081038386 0.24149674 prediction 0.4264130630038 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7585735 chr6:7585736 synonymous SNV . 0 22 hm5C_associated_SNPs_123033 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:7585713-7585738
64251 chr13 113975996 113975996 1 + A G OV 113975993 + 113975973 113976013 41 GCGTTTTCAGTCAATATATTCAAAGTGTGGGTCCAGGCTTT GCGTTTTCAGTCAATATATTCAAGGTGTGGGTCCAGGCTTT < 41bp 0.609300495450918 0.822499151852911 0.31046265 0.8200189 prediction 0.426397312803986 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113975993 chr13:113975996 synonymous SNV . 0 24 hm5C_associated_SNPs_123034 0 0 9 HNRNPU POSTAR2 GSE34491,GSM850170 chr13:113975980-113976000
64251 chr2 228337296 228337296 1 + C T rs140251536 228337295 + 228337275 228337315 41 CTTCGTGTGTACCTCCTGCTCCGGCAGCCTGTGAGTGCGGG CTTCGTGTGTACCTCCTGCTCTGGCAGCCTGTGAGTGCGGG < 41bp 0.512574601741042 0.725763964657031 0.16749784 0.11399567 prediction 0.426378725831978 Functional Gain - AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228337295 chr2:228337296 synonymous SNV . 0 22 hm5C_associated_SNPs_123035 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:228337263-228337299
64251 chr1 207850885 207850885 1 + C A UCEC 207850881 + 207850861 207850901 41 TATCATCTGCCTAAAAAACTCAGTCTGGACAAGTGCTAAGG TATCATCTGCCTAAAAAACTCAGTATGGACAAGTGCTAAGG < 41bp 0.324765482262651 0.713184588794983 0.27134532 0.45183605 prediction 0.426369177589966 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207850881 chr1:207850885 synonymous SNV . 0 25 hm5C_associated_SNPs_123038 0 0 2 DDX24 POSTAR2 ENCODE chr1:207850847-207850909
64251 chr4 113574346 113574346 1 + T C rs142973597 113574343 + 113574323 113574363 41 GCTCAAGCAGTAATAAATGCCTATACAGAAATTAACAAGAA GCTCAAGCAGTAATAAATGCCTACACAGAAATTAACAAGAA < 41bp 0.554641017940555 0.767822824347907 0.2240743 0.59182477 prediction 0.426363612814703 Functional Gain - LARP7 ENSG00000174720 CDS Human protein_coding chr4:113574343 chr4:113574346 synonymous SNV . 0 24 hm5C_associated_SNPs_123040 0 0 2 DDX6 POSTAR2 ENCODE chr4:113574303-113574391
64251 chr5 179143235 179143235 1 + C T SKCM 179143234 + 179143214 179143254 41 AGGACCCAGAAGACCGGAAGCCCGAGGATTGGGATGAAAGA AGGACCCAGAAGACCGGAAGCTCGAGGATTGGGATGAAAGA < 41bp 0.631666892108199 0.844846473647077 0.23747745 0.27716735 prediction 0.426359163077755 Functional Gain - CANX ENSG00000127022 CDS Human protein_coding chr5:179143234 chr5:179143235 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_123041 0 0 39 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:179143107-179143246
64251 chr17 72781695 72781695 1 + C T rs145430683 72781694 + 72781674 72781714 41 GCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCG GCCCAAGGCATTCGCCACTGCTGGGTGGCTTGTCAGCCTCG < 41bp 0.585243716555711 0.798423239467689 0.89563286 0.46987993 prediction 0.426359045823955 Functional Gain - TMEM104 ENSG00000109066 CDS Human protein_coding chr17:72781694 chr17:72781695 synonymous SNV . 0 22 hm5C_associated_SNPs_123042 0 0 1 DDX3X POSTAR2 ENCODE chr17:72781694-72781742
64251 chr20 54978941 54978941 1 + T C rs565582750 54978939 + 54978919 54978959 41 ATAAAAGAATCTTTTTTTACCTTGATGTAGAATCATGGTGG ATAAAAGAATCTTTTTTTACCTCGATGTAGAATCATGGTGG < 41bp 0.609759234966122 0.822935089517818 0.11601028 0.34301135 prediction 0.426351709103392 Functional Gain - CSTF1 ENSG00000101138 UTR3 Human protein_coding chr20:54978939 chr20:54978941 . . 0 23 hm5C_associated_SNPs_123044 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917665 chr20:54978882-54979019
64251 chr6 27806539 27806539 1 + C G UCEC 27806535 + 27806515 27806555 41 GACGGCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTC GACGGCAAGAAGCGCAAGCGCAGCGGCAAGGAGAGCTACTC < 41bp 0.640352903708316 0.853524687814729 0.2534253 0.35966516 prediction 0.426343568212826 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806535 chr6:27806539 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_123046 0 0 2 GRWD1 POSTAR2 ENCODE chr6:27806406-27806541
64251 chr20 54978560 54978560 1 + A G STAD 54978557 + 54978537 54978577 41 TGGACGCCAGGTGCACCGGACACAGGCTGTGTTTAACCACA TGGACGCCAGGTGCACCGGACACGGGCTGTGTTTAACCACA < 41bp 0.479764095498364 0.713157061341534 0.19759864 0.4884413 prediction 0.426314122683067 Functional Gain - CSTF1 ENSG00000101138 CDS Human protein_coding chr20:54978557 chr20:54978560 nonsynonymous SNV 0.979 1 24 hm5C_associated_SNPs_123050 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr20:54978536-54978562
64251 chr1 28285289 28285289 1 + C G BLCA 28285288 + 28285268 28285308 41 GTATGCCTCTGGCACCACGCCCGTGCCCCAGCTCCCGCTGC GTATGCCTCTGGCACCACGCCGGTGCCCCAGCTCCCGCTGC < 41bp 0.390538890322954 0.713153276027223 0.12783745 0.32551035 prediction 0.426306552054446 Functional Gain - SMPDL3B ENSG00000130768 CDS Human protein_coding chr1:28285288 chr1:28285289 synonymous SNV . 0 22 hm5C_associated_SNPs_123052 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:28285256-28285312
64251 chr11 209485 209485 1 + C T UCEC 209484 + 209464 209504 41 GTCATCTGGCTGCAGAGTGTCCGAATCCTGTCCCGGGACCG GTCATCTGGCTGCAGAGTGTCTGAATCCTGTCCCGGGACCG < 41bp 0.585468349047701 0.798618956721574 0.181164 0.27004915 prediction 0.426301215347747 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209484 chr11:209485 stopgain 0.995 1 22 hm5C_associated_SNPs_123055 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:209437-209492
64251 chr8 22262321 22262321 1 + T C rs896378 22262318 + 22262298 22262338 41 CCCTGAGGCTCACGCTTCATCCCTGGGTGCACCAGCTATCA CCCTGAGGCTCACGCTTCATCCCCGGGTGCACCAGCTATCA < 41bp 0.495879933469339 0.713144815435306 0.111576706 0.15866035 prediction 0.426289630870612 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22262318 chr8:22262321 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_123059 0 0 9 RBM47 POSTAR2 GSE58380,GSM1409656 chr8:22262310-22262331
64251 chr9 131678853 131678853 1 + T G rs146478409 131678849 + 131678829 131678869 41 CCTTTTCTCCCTCTGAGACTCACGTCCCCCAGGGCAAGTGC CCTTTTCTCCCTCTGAGACTCACGGCCCCCAGGGCAAGTGC < 41bp 0.530594067032901 0.743737973278811 0.02621755 0.09410542 prediction 0.426287812491819 Functional Gain - LRRC8A ENSG00000136802 UTR3 Human protein_coding chr9:131678849 chr9:131678853 . . 0 25 hm5C_associated_SNPs_123060 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:131678826-131678859
64251 chr9 131476641 131476641 1 + C T LUSC 131476640 + 131476620 131476660 41 AGGCCTCTGACCCTGCCACTCCCAGGTGAGGAGCTCCCTTG AGGCCTCTGACCCTGCCACTCTCAGGTGAGGAGCTCCCTTG < 41bp 0.45560913463822 0.713141905245304 0.16737145 0.039354175 prediction 0.426283810490609 Functional Gain - PKN3 ENSG00000160447 CDS Human protein_coding chr9:131476640 chr9:131476641 nonsynonymous SNV 0.697 1 22 hm5C_associated_SNPs_123062 0 0 2 PRPF8 POSTAR2 ENCODE chr9:131476641-131476708
64251 chr10 12198971 12198971 1 + C T UCEC 12198970 + 12198950 12198990 41 GCCACCAGGACGGACAAAGTCCGAGCTTTACGGGAGGCTTT GCCACCAGGACGGACAAAGTCTGAGCTTTACGGGAGGCTTT < 41bp 0.460970305643889 0.713140326948251 0.24588054 0.061967432 prediction 0.426280653896501 Functional Gain - SEC61A2 ENSG00000065665 CDS Human protein_coding chr10:12198970 chr10:12198971 stopgain 0.998 1 22 hm5C_associated_SNPs_123063 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr10:12198965-12198989
64251 chr19 17628119 17628119 1 + C T LUAD 17628118 + 17628098 17628138 41 CATTCCAAGGGGACTCCATCCCGGTTTTCGACCTGCTGATC CATTCCAAGGGGACTCCATCCTGGTTTTCGACCTGCTGATC < 41bp 0.58878206705879 0.801911969327666 0.9093025 0.8167163 prediction 0.426259804537752 Functional Gain - PGLS ENSG00000130313 CDS Human protein_coding chr19:17628118 chr19:17628119 nonsynonymous SNV 0.321 4 22 hm5C_associated_SNPs_123068 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:17628104-17628131
64251 chr3 32769230 32769230 1 + T C STAD 32769227 + 32769207 32769247 41 AGATATGAGTTGCTGTATAACTGTGGAATTCAGCTTCTTCA AGATATGAGTTGCTGTATAACTGCGGAATTCAGCTTCTTCA < 41bp 0.540440582893307 0.753570329269732 0.118216604 0.31368116 prediction 0.42625949275285 Functional Gain - CNOT10 ENSG00000182973 CDS Human protein_coding chr3:32769227 chr3:32769230 synonymous SNV . 0 24 hm5C_associated_SNPs_123069 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:32769198-32769258
64251 chr16 90025605 90025605 1 + C T SKCM 90025604 + 90025584 90025624 41 GGAGTGAGGAATGAGAGAGACCAAAGTTCCTGCCTCCGCTG GGAGTGAGGAATGAGAGAGACTAAAGTTCCTGCCTCCGCTG < 41bp 0.524670251661617 0.737799443392204 0.2103819 0.28927606 prediction 0.426258383461176 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90025604 chr16:90025605 stopgain 0.001 0 22 hm5C_associated_SNPs_123070 0 0 1 LARP4 POSTAR2 ENCODE chr16:90025591-90025682
64251 chrX 129546420 129546420 1 + C A CESC 129546419 + 129546399 129546439 41 GCAACCATCCTCTTCGTCACCCAGACGCAAGACAGTAAAGG GCAACCATCCTCTTCGTCACCAAGACGCAAGACAGTAAAGG < 41bp 0.61629730467141 0.829425400811366 0.3535455 0.1292409 prediction 0.426256192279911 Functional Gain - RBMX2 ENSG00000134597 CDS Human protein_coding chrX:129546419 chrX:129546420 synonymous SNV . 0 22 hm5C_associated_SNPs_123071 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chrX:129546400-129546420
64251 chr16 28507221 28507221 1 + C T SKCM 28507220 + 28507200 28507240 41 AGAGAGGAGGCCAGGACAACCCCAGGTAGGGAAGAGGCCAG AGAGAGGAGGCCAGGACAACCTCAGGTAGGGAAGAGGCCAG < 41bp 0.580618840769016 0.793740356467162 0.15766796 0.0742023 prediction 0.426243031396293 Functional Gain - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507220 chr16:28507221 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_123075 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:28507211-28507249
64251 chr13 113977127 113977127 1 + C G rs549254879 113977123 + 113977103 113977143 41 CTCTGAGGGGGTGGGGGTGCCGCTCTCTCTGAGGGGGTGGG CTCTGAGGGGGTGGGGGTGCCGCTGTCTCTGAGGGGGTGGG < 41bp 0.437758652006373 0.713121101765306 0.562729 0.69885117 prediction 0.426242203530612 Functional Gain - LAMP1 ENSG00000185896 UTR3 Human protein_coding chr13:113977123 chr13:113977127 . . 0 25 hm5C_associated_SNPs_123076 0 0 4 FAM120A POSTAR2 ENCODE chr13:113977099-113977214
64251 chrX 49031025 49031025 1 + C T COAD 49031024 + 49031004 49031044 41 CTTTTCCTCACCTGCAGACCCCGCAGATGGCCCGGTGTAGG CTTTTCCTCACCTGCAGACCCTGCAGATGGCCCGGTGTAGG < 41bp 0.600274852231637 0.813393692344847 0.103023976 0.14952335 prediction 0.42623768022642 Functional Gain - PLP2 ENSG00000102007 CDS Human protein_coding chrX:49031024 chrX:49031025 synonymous SNV . 0 22 hm5C_associated_SNPs_123077 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:49031020-49031060
64251 chr13 103498673 103498673 1 + C T LUSC 103498672 + 103498652 103498692 41 CTCCGGGCGGCAGGTCAGCCCCGAAGCGCTGGAAGGGAAGA CTCCGGGCGGCAGGTCAGCCCTGAAGCGCTGGAAGGGAAGA < 41bp 0.559764047283688 0.772872224163497 0.3710966 0.35310727 prediction 0.426216353759619 Functional Gain - ERCC5 ENSG00000134899 CDS Human protein_coding chr13:103498672 chr13:103498673 synonymous SNV . 0 22 hm5C_associated_SNPs_123079 0 0 1 FXR2 POSTAR2 ENCODE chr13:103498606-103498691
64251 chr17 73206069 73206069 1 + C T LUAD 73206068 + 73206048 73206088 41 CGAAGAGTTGACTGGAAAATCCAGAAAATCTCAGTAAGTTG CGAAGAGTTGACTGGAAAATCTAGAAAATCTCAGTAAGTTG < 41bp 0.597398306326468 0.810500509055995 0.20766747 0.27418453 prediction 0.426204405459053 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73206068 chr17:73206069 synonymous SNV . 0 22 hm5C_associated_SNPs_123082 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73205924-73206081
64251 chr1 28177376 28177376 1 + C A rs74065445 28177375 + 28177355 28177395 41 ATTCACTATCCTTCCAAGTCCCGGGTAGCAGAAGGGTTGCC ATTCACTATCCTTCCAAGTCCAGGGTAGCAGAAGGGTTGCC < 41bp 0.449937356733052 0.713092177402537 0.18784487 0.41808915 prediction 0.426184354805073 Functional Gain - PPP1R8 ENSG00000117751 UTR3 Human protein_coding chr1:28177375 chr1:28177376 . . 0 22 hm5C_associated_SNPs_123084 0 0 11 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:28177319-28177376
64251 chr21 40765134 40765134 1 + C T SKCM 40765133 + 40765113 40765153 41 ATTTGGAAGTATTATTCTGTCCCTGTGGCTGTCGTGCCGAG ATTTGGAAGTATTATTCTGTCTCTGTGGCTGTCGTGCCGAG < 41bp 0.458909142548592 0.71308738564194 0.13243553 0.18834475 prediction 0.426174771283881 Functional Gain - WRB ENSG00000182093 CDS Human protein_coding chr21:40765133 chr21:40765134 nonsynonymous SNV 0.808 4 22 hm5C_associated_SNPs_123085 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:40765112-40765182
64251 chr2 168725963 168725963 1 + T C rs115326727 168725961 + 168725941 168725981 41 AGCAAGAGAGCCAAATCTTCCATGATATCATCGTGGAGGAC AGCAAGAGAGCCAAATCTTCCACGATATCATCGTGGAGGAC < 41bp 0.645693168806354 0.858774953315379 0.24203786 0.24186808 prediction 0.42616356901805 Functional Gain - B3GALT1 ENSG00000172318 CDS Human protein_coding chr2:168725961 chr2:168725963 synonymous SNV . 0 23 hm5C_associated_SNPs_123087 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:168725950-168726028
64251 chr11 71710328 71710328 1 + A G rs185102044 71710325 + 71710305 71710345 41 TGTGAAGGTGAAGGAGGAAGCAGATGCCTGTTCATATGGAA TGTGAAGGTGAAGGAGGAAGCAGGTGCCTGTTCATATGGAA < 41bp 0.488619270656787 0.713078848438696 0.46372446 0.5564743 prediction 0.426157696877393 Functional Gain - IL18BP ENSG00000137496 UTR5 Human protein_coding chr11:71710325 chr11:71710328 . . 0 24 hm5C_associated_SNPs_123090 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:71710283-71710330
64251 chr2 122522899 122522899 1 + C T SKCM 122522898 + 122522878 122522918 41 GTGGTCTATGATCTCTCCATCCGGGGCTTTAATAAGGAGAC GTGGTCTATGATCTCTCCATCTGGGGCTTTAATAAGGAGAC < 41bp 0.563489592403975 0.776555115419801 0.9404137 0.91571665 prediction 0.426131046031653 Functional Gain - TSN ENSG00000211460 CDS Human protein_coding chr2:122522898 chr2:122522899 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123093 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:122522817-122522902
64251 chr4 4864457 4864457 1 + C T LIHC 4864456 + 4864436 4864476 41 AGCCCCCCAGCCTGCACCCTCCGCAAACACAAGACGAACCG AGCCCCCCAGCCTGCACCCTCTGCAAACACAAGACGAACCG < 41bp 0.620866760256787 0.833914113540578 0.1161367 0.60013497 prediction 0.426094706567581 Functional Gain - MSX1 ENSG00000163132 CDS Human protein_coding chr4:4864456 chr4:4864457 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_123101 0 0 1 U2AF2 POSTAR2 ENCODE chr4:4864407-4864462
64251 chr17 37820175 37820175 1 + A G rs2941511 37820172 + 37820152 37820192 41 ACTCACCCATTCCCTCTCCCCGCACGGCACTCACACCAGGG ACTCACCCATTCCCTCTCCCCGCGCGGCACTCACACCAGGG < 41bp 0.537811218795137 0.750855780961252 0.06720966 0.25462356 prediction 0.426089124332229 Functional Gain - STARD3 ENSG00000173991;ENSG00000131748 upstream;downstream Human other chr17:37820172 chr17:37820175 . . 0 24 hm5C_associated_SNPs_123105 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:37820151-37820193
64251 chr11 65392959 65392959 1 + C T HNSC 65392958 + 65392938 65392978 41 CCGAGCCCCCGGACCCCTTGCCGGACAAGATGCGCCAGTCG CCGAGCCCCCGGACCCCTTGCTGGACAAGATGCGCCAGTCG < 41bp 0.590018303080284 0.803048671452888 0.59970695 0.32478648 prediction 0.426060736745209 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392958 chr11:65392959 nonsynonymous SNV 0.993 3 22 hm5C_associated_SNPs_123112 0 0 1 SRSF1 POSTAR2 ENCODE chr11:65392875-65392960
64251 chr10 4877971 4877971 1 + C G LUAD 4877970 + 4877950 4877990 41 CGAGAGCAACATGGTTATTCCCAGTGACACGGACTTCCTGG CGAGAGCAACATGGTTATTCCGAGTGACACGGACTTCCTGG < 41bp 0.397121876772914 0.713022325484196 0.19407067 0.87791574 prediction 0.426044650968393 Functional Gain - AKR1E2 ENSG00000165568 CDS Human protein_coding chr10:4877970 chr10:4877971 synonymous SNV . 0 22 hm5C_associated_SNPs_123114 0 0 1 DDX24 POSTAR2 ENCODE chr10:4877930-4878003
64251 chr11 34162732 34162732 1 + C T SKCM 34162731 + 34162711 34162751 41 CAGTTGATGGGACTTTTCAACCGGATCATCCGCAAAGTTGT CAGTTGATGGGACTTTTCAACTGGATCATCCGCAAAGTTGT < 41bp 0.6143251529916 0.827341311864899 0.3148619 0.10963842 prediction 0.426032317746599 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34162731 chr11:34162732 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_123115 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:34162714-34162750
64251 chr15 63481799 63481799 1 + C G rs551855409 63481795 + 63481775 63481815 41 CTCTCCACCGCCTCCTCTGGCTCCCCGGTCAGAGGGCCGGA CTCTCCACCGCCTCCTCTGGCTCCGCGGTCAGAGGGCCGGA < 41bp 0.474479676830635 0.713012735571427 0.0687477 0.16981128 prediction 0.426025471142854 Functional Gain - RAB8B ENSG00000166128 UTR5 Human protein_coding chr15:63481795 chr15:63481799 . . 0 25 hm5C_associated_SNPs_123117 0 0 1 DDX3X POSTAR2 ENCODE chr15:63481784-63481936
64251 chr11 119205994 119205994 1 + T C LAML 119205992 + 119205972 119206012 41 CGCACACGGTACTGACTAGTCTTCTGCACTTGGGCCGCGGA CGCACACGGTACTGACTAGTCTCCTGCACTTGGGCCGCGGA < 41bp 0.451624309565616 0.713007589044321 0.16961673 0.1901896 prediction 0.426015178088642 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119205992 chr11:119205994 synonymous SNV . 0 23 hm5C_associated_SNPs_123120 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr11:119205960-119206000
64251 chr11 396684 396684 1 + C A LGG 396683 + 396663 396703 41 GGGCCTGAGTGGGGACAAGACCTCGGTGAGCGATGGGCCCA GGGCCTGAGTGGGGACAAGACATCGGTGAGCGATGGGCCCA < 41bp 0.446919711774306 0.713000777493184 0.7570535 0.5773701 prediction 0.426001554986368 Functional Gain - PKP3 ENSG00000184363 CDS Human protein_coding chr11:396683 chr11:396684 synonymous SNV . 0 22 hm5C_associated_SNPs_123123 0 0 1 PRPF8 POSTAR2 ENCODE chr11:396676-396721
64251 chr19 34843700 34843700 1 + C A UCEC 34843699 + 34843679 34843719 41 CCATGCAGATGCTGCAGTCCCCAGTGTGGGCCGCAACCAAC CCATGCAGATGCTGCAGTCCCAAGTGTGGGCCGCAACCAAC < 41bp 0.455202720635482 0.712989320915302 0.19520202 0.45007396 prediction 0.425978641830605 Functional Gain - KIAA0355 ENSG00000166398 CDS Human protein_coding chr19:34843699 chr19:34843700 nonsynonymous SNV 0.600 4 22 hm5C_associated_SNPs_123130 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:34843688-34843712
64251 chr2 47238537 47238537 1 + T C HNSC 47238535 + 47238515 47238555 41 CCCTCGGACCCCACCGTGCCCCTGATGGCCGCGAAGGTCTG CCCTCGGACCCCACCGTGCCCCCGATGGCCGCGAAGGTCTG < 41bp 0.432096036728738 0.712976524819306 0.088709265 0.10618523 prediction 0.425953049638612 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47238535 chr2:47238537 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_123133 0 0 1 PPIG POSTAR2 ENCODE chr2:47238500-47238581
64251 chr4 56212692 56212692 1 + C T LUAD 56212691 + 56212671 56212711 41 GTGTGGGGAGCCGTCGCGCCCCGCCGCCTGCCGAGCCTTTG GTGTGGGGAGCCGTCGCGCCCTGCCGCCTGCCGAGCCTTTG < 41bp 0.545821521189537 0.758792892573184 0.22440764 0.31404334 prediction 0.425942742767294 Functional Gain - SRD5A3 ENSG00000128039 CDS Human protein_coding chr4:56212691 chr4:56212692 synonymous SNV . 0 22 hm5C_associated_SNPs_123136 0 0 1 DDX3X POSTAR2 ENCODE chr4:56212665-56212705
64251 chr1 166819085 166819085 1 + C A LIHC 166819084 + 166819064 166819104 41 TTTGAGGGGAACATATATCCCCCCGGGGAAGTTTCCCAGTG TTTGAGGGGAACATATATCCCACCGGGGAAGTTTCCCAGTG < 41bp 0.61974611141176 0.832715395117647 0.14034003 0.22417256 prediction 0.425938567411775 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166819084 chr1:166819085 synonymous SNV . 0 22 hm5C_associated_SNPs_123137 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr1:166819055-166819090
64251 chr2 54365829 54365829 1 + C T rs115587659 54365828 + 54365808 54365848 41 GGTTGGCTGGGTGAAGAATACCAGCAAAGGCACCGTGACAG GGTTGGCTGGGTGAAGAATACTAGCAAAGGCACCGTGACAG < 41bp 0.595836286210321 0.808798384895003 0.4238925 0.23168439 prediction 0.425924197369363 Functional Gain - ACYP2 ENSG00000170634 CDS Human protein_coding chr2:54365828 chr2:54365829 synonymous SNV . 0 22 hm5C_associated_SNPs_123141 0 0 2 PPIG POSTAR2 ENCODE chr2:54365775-54365886
64251 chr20 26064196 26064196 1 + C T rs570290294 26064195 + 26064175 26064215 41 TACCAGGCCCCAGGTGAAATCCCCAGGCTCCAAATGGACAA TACCAGGCCCCAGGTGAAATCTCCAGGCTCCAAATGGACAA < 41bp 0.534508830780751 0.747467667799191 0.21157515 0.9363754 prediction 0.42591767403688 Functional Gain - FAM182A ENSG00000125804 ncRNA_exonic Human processed_transcript chr20:26064195 chr20:26064196 . . 0 22 hm5C_associated_SNPs_123142 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr20:26064180-26064200
64251 chr19 2810714 2810714 1 + C T rs150480995 2810713 + 2810693 2810733 41 GCAGACGGACGCAGACCCCGCCGAGGAGTATGCGCGGCTCT GCAGACGGACGCAGACCCCGCTGAGGAGTATGCGCGGCTCT < 41bp 0.574081882643883 0.787038966812624 0.8599739 0.74208033 prediction 0.425914168337483 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2810713 chr19:2810714 synonymous SNV . 0 22 hm5C_associated_SNPs_123143 0 0 3 PPIG POSTAR2 ENCODE chr19:2810711-2810763
64251 chr4 5755644 5755644 1 + C T STAD 5755643 + 5755623 5755663 41 AGGCCCAGCCGACTGCTGACCCGGAAAAGTTTCTCGAGGTG AGGCCCAGCCGACTGCTGACCTGGAAAAGTTTCTCGAGGTG < 41bp 0.581655966149821 0.794604119103147 0.49261072 0.34560764 prediction 0.425896305906652 Functional Gain - EVC ENSG00000072840 CDS Human protein_coding chr4:5755643 chr4:5755644 nonsynonymous SNV 0.002 2 22 hm5C_associated_SNPs_123147 0 0 3 PPIG POSTAR2 ENCODE chr4:5755586-5755658
64251 chr8 26509877 26509877 1 + C T rs139997920 26509876 + 26509856 26509896 41 GGACGGCACCCTGCATGTCACCGAAGGCTCTGGACGCTACA GGACGGCACCCTGCATGTCACTGAAGGCTCTGGACGCTACA < 41bp 0.447891020417903 0.712940081547454 0.066752255 0.04821515 prediction 0.425880163094909 Functional Gain - DPYSL2 ENSG00000092964 CDS Human protein_coding chr8:26509876 chr8:26509877 synonymous SNV . 0 22 hm5C_associated_SNPs_123149 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:26509874-26509892
64251 chr9 124074692 124074692 1 + C T UCEC 124074691 + 124074671 124074711 41 ACACAGGTGTCCAAGGGCATCCGGGACAACGAGCGGAGTGG ACACAGGTGTCCAAGGGCATCTGGGACAACGAGCGGAGTGG < 41bp 0.580157496228903 0.793097357965073 0.80796087 0.40834105 prediction 0.425879723472342 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124074691 chr9:124074692 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_123150 0 0 5 DHX30 POSTAR2 ENCODE chr9:124074668-124074726
64251 chr13 29252193 29252193 1 + T C UCEC 29252191 + 29252171 29252211 41 GATCCATCACAAAGCGAAGTCATGGGAGAGCCACACTTGAT GATCCATCACAAAGCGAAGTCACGGGAGAGCCACACTTGAT < 41bp 0.608699012097869 0.821629109600207 0.38633603 0.29481542 prediction 0.425860195004677 Functional Gain - POMP ENSG00000132963 CDS Human protein_coding chr13:29252191 chr13:29252193 nonsynonymous SNV 0.992 2 23 hm5C_associated_SNPs_123152 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr13:29252180-29252200
64251 chr1 113238119 113238119 1 + C T SKCM 113238118 + 113238098 113238138 41 GACCTACTCTGTCAAAGGCTCCGGGTCCACCTTCCTAGCTC GACCTACTCTGTCAAAGGCTCTGGGTCCACCTTCCTAGCTC < 41bp 0.600220353657413 0.813146626593715 0.9026545 0.93059623 prediction 0.425852545872605 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113238118 chr1:113238119 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_123153 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr1:113238108-113238135
64251 chr10 103899079 103899079 1 + C T SKCM 103899078 + 103899058 103899098 41 GACAACTGTGTGAGCAGTATCCCGGACTTCCCCATGCATTT GACAACTGTGTGAGCAGTATCTCGGACTTCCCCATGCATTT < 41bp 0.470427743877334 0.712923084482473 0.82807374 0.21393871 prediction 0.425846168964946 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103899078 chr10:103899079 nonsynonymous SNV 0.251 1 22 hm5C_associated_SNPs_123154 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:103899047-103899118
64251 chr17 72758289 72758289 1 + C T BLCA 72758288 + 72758268 72758308 41 CCGGCTGAGGCTTCAGGGCTCCGGGCCCAGGATCGCATTGT CCGGCTGAGGCTTCAGGGCTCTGGGCCCAGGATCGCATTGT < 41bp 0.572746012493558 0.785658924411165 0.8727524 0.8371384 prediction 0.425825823835214 Functional Gain - SLC9A3R1 ENSG00000109062 CDS Human protein_coding chr17:72758288 chr17:72758289 nonsynonymous SNV 0.924 3 22 hm5C_associated_SNPs_123157 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:72758262-72758298
64251 chr2 65497571 65497571 1 + C A rs268878 65497570 + 65497550 65497590 41 TGCTGGACATGCCTCAGAACCCTGAATAGCCCGTACTAGAT TGCTGGACATGCCTCAGAACCATGAATAGCCCGTACTAGAT < 41bp 0.588369479615301 0.801280969266338 0.10685611 0.3258785 prediction 0.425822979302075 Functional Gain - ACTR2 ENSG00000138071 UTR3 Human protein_coding chr2:65497570 chr2:65497571 . . 0 22 hm5C_associated_SNPs_123160 0 0 16 UPF1 POSTAR2 GSE69586,GSM1704214 chr2:65497560-65497581
64251 chr3 48309966 48309966 1 + A G LIHC 48309963 + 48309943 48309983 41 GCGAGGCTTTAGCAGGAAGTCACAGCTCATCATACACCAGA GCGAGGCTTTAGCAGGAAGTCACGGCTCATCATACACCAGA < 41bp 0.580533942844653 0.79344515705278 0.016001165 0.0021385849 prediction 0.425822428416256 Functional Gain - ZNF589 ENSG00000164048 CDS Human protein_coding chr3:48309963 chr3:48309966 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_123161 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:48309931-48309986
64251 chr21 42647329 42647329 1 + C T HNSC 42647328 + 42647308 42647348 41 TGCTGCAGTGTCTGAAATTTCCGGGCCTTTCTCAACAGAGG TGCTGCAGTGTCTGAAATTTCTGGGCCTTTCTCAACAGAGG < 41bp 0.573059722920335 0.7859663629008 0.8790547 0.6533217 prediction 0.425813279960932 Functional Gain - BACE2 ENSG00000182240 CDS Human protein_coding chr21:42647328 chr21:42647329 nonsynonymous SNV 0.821 1 22 hm5C_associated_SNPs_123163 0 0 8 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr21:42647321-42647331
64251 chr14 53175072 53175072 1 + A G LGG 53175069 + 53175049 53175089 41 TACCAAGCAGTATGAAAAGTCTGAAAATGATCTGAAGGCCC TACCAAGCAGTATGAAAAGTCTGGAAATGATCTGAAGGCCC < 41bp 0.523205403035034 0.736105085935395 0.04955575 0.23592481 prediction 0.425799365800721 Functional Gain - PSMC6 ENSG00000100519 CDS Human protein_coding chr14:53175069 chr14:53175072 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_123168 0 0 2 GPKOW POSTAR2 ENCODE chr14:53175046-53175135
64251 chr22 50319131 50319131 1 + C T LUSC 50319130 + 50319110 50319150 41 ACGAAAACTGCTACAATACTCCAGGGAGCTACGTCTGTGTG ACGAAAACTGCTACAATACTCTAGGGAGCTACGTCTGTGTG < 41bp 0.571649658021283 0.784539397772896 0.8890036 0.69492906 prediction 0.425779479503227 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50319130 chr22:50319131 nonsynonymous SNV 0.111 1 22 hm5C_associated_SNPs_123171 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr22:50319113-50319142
64251 chr15 50474900 50474900 1 + C G rs34490804 50474899 + 50474879 50474919 41 CCGGCGCAGCAATCAAGTGGCCCGGGCGCTGCACGACCACC CCGGCGCAGCAATCAAGTGGCGCGGGCGCTGCACGACCACC < 41bp 0.679675721014824 0.892563609225406 0.79363644 0.87094104 prediction 0.425775776421163 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50474899 chr15:50474900 synonymous SNV . 0 22 hm5C_associated_SNPs_123172 0 0 3 SND1 POSTAR2 ENCODE chr15:50474896-50474928
64251 chr2 133402824 133402824 1 - G C CESC 133402828 - 133402808 133402848 41 TACAGGAGCGGGTTGATGACCGAGCTGAGGTAGAAAAACGT TACAGGAGCGGGTTGATGACCGAGGTGAGGTAGAAAAACGT < 41bp 0.63087032993845 0.843751395665422 0.48178664 0.87070817 prediction 0.425762131453945 Functional Gain - GPR39 ENSG00000183840 CDS Human protein_coding chr2:133402828 chr2:133402824 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_123174 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:133402816-133402835
64251 chr18 3277816 3277816 1 + T C SKCM 3277813 + 3277793 3277833 41 TGCTGACAACCATGGGGGATCGGTTTACAGATGAGGAAGTG TGCTGACAACCATGGGGGATCGGCTTACAGATGAGGAAGTG < 41bp 0.502659925170491 0.715540546509083 0.13806698 0.194974 prediction 0.425761242677184 Functional Gain - MYL12B ENSG00000118680 CDS Human protein_coding chr18:3277813 chr18:3277816 nonsynonymous SNV 0.889 2 24 hm5C_associated_SNPs_123175 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr18:3277784-3277845
64251 chr3 111672823 111672823 1 + C A rs530126533 111672819 + 111672799 111672839 41 GTAACAGCTGTGGAAGTGTGCTCCCTCCCTCACTGGCAGCC GTAACAGCTGTGGAAGTGTGCTCCATCCCTCACTGGCAGCC < 41bp 0.284394107946815 0.712879241575604 0.11403361 0.62632257 prediction 0.425758483151208 Functional Gain - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111672819 chr3:111672823 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_123176 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:111672801-111672826
64251 chr17 4925966 4925966 1 + C T BRCA 4925965 + 4925945 4925985 41 GAGCTGCAGGCCCTGCGGGACCGCATGCTCCGCATGGAGAG GAGCTGCAGGCCCTGCGGGACTGCATGCTCCGCATGGAGAG < 41bp 0.451950375973199 0.712875553573143 0.11110821 0.16311851 prediction 0.425751107146286 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4925965 chr17:4925966 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_123178 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4925939-4925983
64251 chr8 75896768 75896768 1 + T C rs7821694 75896766 + 75896746 75896786 41 GCTAGGCGCCTGGTTCTGCGCGTACTGGCTGTACGGAGCAG GCTAGGCGCCTGGTTCTGCGCGCACTGGCTGTACGGAGCAG < 41bp 0.530807715862488 0.743680117096205 0.16207051 0.1290302 prediction 0.425744802467435 Functional Gain - CRISPLD1 ENSG00000121005 UTR5 Human protein_coding chr8:75896766 chr8:75896768 . . 0 23 hm5C_associated_SNPs_123179 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:75896767-75896768
64251 chr4 159780248 159780248 1 + T C rs547291618 159780245 + 159780225 159780265 41 TTCAGCTTGGCTGAAGAAACCTGTAGCTCTAATCCAGCTAT TTCAGCTTGGCTGAAGAAACCTGCAGCTCTAATCCAGCTAT < 41bp 0.487545136773216 0.712871702693248 0.03911233 0.10066086 prediction 0.425743405386496 Functional Gain - FNIP2 ENSG00000052795 CDS Human protein_coding chr4:159780245 chr4:159780248 synonymous SNV . 0 24 hm5C_associated_SNPs_123180 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:159780219-159780269
64251 chr14 24909579 24909579 1 - G A COAD 24909580 - 24909560 24909600 41 CCCTGGATACACATCGGGGACCTGGCAGGAATCCTGACCCA CCCTGGATACACATCGGGGACTTGGCAGGAATCCTGACCCA < 41bp 0.472469893997729 0.712867511675488 0.19438201 0.35147357 prediction 0.425735023350976 Functional Gain - SDR39U1 ENSG00000100445 CDS Human protein_coding chr14:24909580 chr14:24909579 synonymous SNV . 0 22 hm5C_associated_SNPs_123185 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:24909548-24909594
64251 chr19 35512665 35512665 1 + C A rs2290645 35512664 + 35512644 35512684 41 GGATGCCCGGGGCTTGCTATCCGGCCTGCGGCGGCGGAAGC GGATGCCCGGGGCTTGCTATCAGGCCTGCGGCGGCGGAAGC < 41bp 0.620653380863922 0.83352004558068 0.8536738 0.908679 prediction 0.425733329433515 Functional Gain - GRAMD1A ENSG00000089351 CDS Human protein_coding chr19:35512664 chr19:35512665 synonymous SNV . 0 22 hm5C_associated_SNPs_123186 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:35512645-35512677
64251 chr19 54967877 54967877 1 + C T UCEC 54967876 + 54967856 54967896 41 CGGCGCTGGAGTGTGAGGACCCGGAGCGAGAGCTGAAGAAG CGGCGCTGGAGTGTGAGGACCTGGAGCGAGAGCTGAAGAAG < 41bp 0.608863503571933 0.82173015824792 0.72500825 0.5291364 prediction 0.425733309351974 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54967876 chr19:54967877 nonsynonymous SNV 0.608 3 22 hm5C_associated_SNPs_123187 0 0 14 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr19:54967840-54967880
64251 chr19 14070099 14070099 1 + C T LUAD 14070098 + 14070078 14070118 41 GGCGGGGTCCCTGAGGAAGCCCGGCCTGCCCTGTGCCCAGG GGCGGGGTCCCTGAGGAAGCCTGGCCTGCCCTGTGCCCAGG < 41bp 0.569046871525222 0.781900598516825 0.5495073 0.5068909 prediction 0.425707453983207 Functional Gain - DCAF15 ENSG00000132017 CDS Human protein_coding chr19:14070098 chr19:14070099 nonsynonymous SNV 0.067 2 22 hm5C_associated_SNPs_123192 0 0 1 RPS3 POSTAR2 ENCODE chr19:14070075-14070142
64251 chr6 168445554 168445554 1 + A G STAD 168445551 + 168445531 168445571 41 TTCTCTGCATTTCTCCCAGCCAGAGGCACCTGGCACAGACG TTCTCTGCATTTCTCCCAGCCAGGGGCACCTGGCACAGACG < 41bp 0.459558375896137 0.712850505383688 0.7223828 0.92801976 prediction 0.425701010767375 Functional Gain - KIF25 ENSG00000125337 CDS Human protein_coding chr6:168445551 chr6:168445554 nonsynonymous SNV 0.007 2 24 hm5C_associated_SNPs_123193 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:168445545-168445585
64251 chr3 47450928 47450928 1 + A G UCEC 47450925 + 47450905 47450945 41 AGAAGTTGTTCGAGGAGCAGCTGAAAAAGTATGACCAGCTG AGAAGTTGTTCGAGGAGCAGCTGGAAAAGTATGACCAGCTG < 41bp 0.585284556899308 0.79813341101536 0.8950831 0.6110818 prediction 0.425697708232103 Functional Gain - PTPN23 ENSG00000076201 CDS Human protein_coding chr3:47450925 chr3:47450928 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_123195 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:47450928-47450947
64251 chr8 90796355 90796355 1 + T C STAD 90796353 + 90796333 90796373 41 CTCTGAACATACCTGTAAATCATGGTCCACAAGAGGTAAAA CTCTGAACATACCTGTAAATCACGGTCCACAAGAGGTAAAA < 41bp 0.445791509626258 0.712839770003663 0.725536 0.75230646 prediction 0.425679540007326 Functional Gain - RIPK2 ENSG00000104312 CDS Human protein_coding chr8:90796353 chr8:90796355 synonymous SNV . 0 23 hm5C_associated_SNPs_123203 0 0 1 PUM2 POSTAR2 ENCODE chr8:90796342-90796368
64251 chr16 29818187 29818187 1 + C T STAD 29818186 + 29818166 29818206 41 CCAGTCCCGCTTCTTTGCCTCCCAGGGCTGCGCCCAGAGTC CCAGTCCCGCTTCTTTGCCTCTCAGGGCTGCGCCCAGAGTC < 41bp 0.487703776156971 0.712836773131703 0.15435001 0.08016476 prediction 0.425673546263407 Functional Gain - MAZ ENSG00000103495 CDS Human protein_coding chr16:29818186 chr16:29818187 synonymous SNV . 0 22 hm5C_associated_SNPs_123204 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:29818062-29818202
64251 chr20 47851624 47851624 1 + C T CESC 47851623 + 47851603 47851643 41 ACGCAGCGGCTGGAGGCCCTCCGGTAACATTTGGGGTGGGG ACGCAGCGGCTGGAGGCCCTCTGGTAACATTTGGGGTGGGG < 41bp 0.597879550855412 0.810713443598127 0.38905448 0.31857193 prediction 0.425667785485429 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47851623 chr20:47851624 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_123205 0 0 1 PRPF8 POSTAR2 ENCODE chr20:47851620-47851669
64251 chr14 24108190 24108190 1 + C A HNSC 24108189 + 24108169 24108209 41 CGTCCTGGCTAACCGGGTAGCCGTGGTCACGGGGTCCACCA CGTCCTGGCTAACCGGGTAGCAGTGGTCACGGGGTCCACCA < 41bp 0.628745959951613 0.841578129157091 0.9021498 0.8483455 prediction 0.425664338410956 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24108189 chr14:24108190 synonymous SNV . 0 22 hm5C_associated_SNPs_123208 0 0 6 GRSF1 POSTAR2 ENCODE chr14:24108180-24108194
64251 chr8 98731381 98731381 1 + T C UCEC 98731378 + 98731358 98731398 41 TTTTCCTTGAAGACCATAAGCACTAGTGATCCAGCCGAAGT TTTTCCTTGAAGACCATAAGCACCAGTGATCCAGCCGAAGT < 41bp 0.481623434163073 0.71281676645212 0.20824793 0.75318813 prediction 0.425633532904239 Functional Gain - MTDH ENSG00000147649 CDS Human protein_coding chr8:98731378 chr8:98731381 synonymous SNV . 0 24 hm5C_associated_SNPs_123211 0 0 6 HNRNPC POSTAR2 E-MTAB-1371,ERR196174-ERR196175-ERR196179-ERR196187 chr8:98731364-98731385
64251 chr12 52452493 52452493 1 + C T STAD 52452492 + 52452472 52452512 41 ACCGGCATGGGCTGCAGGAGCCGCGGCGGGTGGAGGAGCTG ACCGGCATGGGCTGCAGGAGCTGCGGCGGGTGGAGGAGCTG < 41bp 0.576095199780329 0.788899113313312 0.78770924 0.8068253 prediction 0.425607827065966 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52452492 chr12:52452493 nonsynonymous SNV 0.435 4 22 hm5C_associated_SNPs_123216 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:52452489-52452513
64251 chr12 64875633 64875633 1 + T A COAD 64875629 + 64875609 64875649 41 AATACTATTTTAGGGGTCTTCAGGTTCTACTTACCCCTGTT AATACTATTTTAGGGGTCTTCAGGATCTACTTACCCCTGTT < 41bp 0.671070725259756 0.883872638057548 0.86553264 0.90230536 prediction 0.425603825595585 Functional Gain - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64875629 chr12:64875633 nonsynonymous SNV 0.894 0 25 hm5C_associated_SNPs_123219 0 0 1 DDX24 POSTAR2 ENCODE chr12:64875621-64875653
64251 chr12 108961024 108961024 1 + C T UCEC 108961023 + 108961003 108961043 41 CCAAGGAGCTCTGCCTTCCTCCCGTGAAACTGCACTGCTCC CCAAGGAGCTCTGCCTTCCTCTCGTGAAACTGCACTGCTCC < 41bp 0.625755834065541 0.838552451232717 0.35083652 0.41281003 prediction 0.425593234334351 Functional Gain - ISCU ENSG00000136003 CDS Human protein_coding chr12:108961023 chr12:108961024 nonsynonymous SNV 0.912 4 22 hm5C_associated_SNPs_123221 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:108960992-108961024
64251 chrX 142967239 142967239 1 + C A LUSC 142967238 + 142967218 142967258 41 CACAGGATCATCAAGGAAACCCAGCGTTTGCTGGCAGAGCC CACAGGATCATCAAGGAAACCAAGCGTTTGCTGGCAGAGCC < 41bp 0.593784638962192 0.806579587842825 0.078410655 0.12818924 prediction 0.425589897761266 Functional Gain - UBE2NL ENSG00000102069 CDS Human other chrX:142967238 chrX:142967239 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_123222 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chrX:142967220-142967245
64251 chr9 140110460 140110460 1 + C T SKCM 140110459 + 140110439 140110479 41 GACCCTCATCCCTGCCTTCTCCCGGGAACAGGTGTGTATGC GACCCTCATCCCTGCCTTCTCTCGGGAACAGGTGTGTATGC < 41bp 0.613281087582401 0.826075454996441 0.9140219 0.39896676 prediction 0.425588734828079 Functional Gain - NDOR1 ENSG00000188566 CDS Human protein_coding chr9:140110459 chr9:140110460 synonymous SNV . 0 22 hm5C_associated_SNPs_123225 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:140110431-140110461
64251 chr19 56127059 56127059 1 + T C rs538864633 56127057 + 56127037 56127077 41 ATGAGTCACAAGGAGGTCCACATGGCAGAGAAGCCATACGG ATGAGTCACAAGGAGGTCCACACGGCAGAGAAGCCATACGG < 41bp 0.47751718159797 0.712794284867763 0.052949995 0.03649822 prediction 0.425588569735527 Functional Gain - ZNF865 ENSG00000261221 CDS Human protein_coding chr19:56127057 chr19:56127059 nonsynonymous SNV 0.985 0 23 hm5C_associated_SNPs_123226 0 0 1 RBM15 POSTAR2 ENCODE chr19:56127035-56127075
64251 chr20 49197850 49197850 1 + T C UCEC 49197848 + 49197828 49197868 41 GTCGGGTCGTGGGGGGAAGTCTTCGAGGTGCCCAGGCTGCC GTCGGGTCGTGGGGGGAAGTCTCCGAGGTGCCCAGGCTGCC < 41bp 0.655759970926844 0.868551400838384 0.5195509 0.85143363 prediction 0.42558285982308 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49197848 chr20:49197850 synonymous SNV . 0 23 hm5C_associated_SNPs_123228 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:49197819-49197855
64251 chr1 156837916 156837916 1 + T C STAD 156837913 + 156837893 156837933 41 CAGGGTCCTGTCGGGGAACCCTCTGCACTGTTCTTGTGCCC CAGGGTCCTGTCGGGGAACCCTCCGCACTGTTCTTGTGCCC < 41bp 0.521344546435803 0.734131375511684 0.24718592 0.1134527 prediction 0.425573658151761 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156837913 chr1:156837916 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_123232 0 0 1 AKAP8L POSTAR2 ENCODE chr1:156837888-156837934
64251 chr2 27262945 27262945 1 + T C UCEC 27262943 + 27262923 27262963 41 TGGGGCTCCCACCTGCTCACCGTGGTGCGGCCCAGCTTGCA TGGGGCTCCCACCTGCTCACCGCGGTGCGGCCCAGCTTGCA < 41bp 0.620863980948181 0.833639865494498 0.32802713 0.490203 prediction 0.425551769092634 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27262943 chr2:27262945 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_123238 0 0 3 IGF2BP2 POSTAR2 ENCODE chr2:27262897-27262987
64251 chr5 177035964 177035964 1 + T C rs729459 177035962 + 177035942 177035982 41 ACAAGACATTTCGCCACCTGCATGACCCAGCCTGGCGGAAG ACAAGACATTTCGCCACCTGCACGACCCAGCCTGGCGGAAG < 41bp 0.642242512564225 0.855012317314484 0.17901123 0.09051451 prediction 0.425539609500518 Functional Gain - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177035962 chr5:177035964 synonymous SNV . 0 23 hm5C_associated_SNPs_123241 1 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr5:177035954-177035982
64251 chr6 26124814 26124814 1 + T C LAML 26124812 + 26124792 26124832 41 ACATCCAGGCCGTGCTTCTGCCTAAGAAGACCGAGAGTCAC ACATCCAGGCCGTGCTTCTGCCCAAGAAGACCGAGAGTCAC < 41bp 0.454060854496086 0.712766504857647 0.011467516 0.010946959 prediction 0.425533009715293 Functional Gain - HIST1H2AC ENSG00000180573 CDS Human protein_coding chr6:26124812 chr6:26124814 synonymous SNV . 0 23 hm5C_associated_SNPs_123242 0 0 24 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26124720-26124820
64251 chr8 22476886 22476886 1 + C G rs200616424 22476885 + 22476865 22476905 41 AAAGGTAAGGTGGGGGTGGACCAGGAGGCAGCACAGCTCCT AAAGGTAAGGTGGGGGTGGACGAGGAGGCAGCACAGCTCCT < 41bp 0.390889446342594 0.712763932014379 0.83525133 0.81048 prediction 0.425527864028759 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22476885 chr8:22476886 synonymous SNV . 0 22 hm5C_associated_SNPs_123245 0 0 5 BUD13 POSTAR2 ENCODE chr8:22476867-22476916
64251 chr19 7671263 7671263 1 + T A SKCM 7671259 + 7671239 7671279 41 TGACCAGCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACG TGACCAGCTTGGAGCACAAGCTGCATTTCTGGGTGGACACG < 41bp 0.369064965051378 0.712763562363706 0.032909065 0.12719434 prediction 0.425527124727412 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7671259 chr19:7671263 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_123246 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr19:7671252-7671275
64251 chr6 26522968 26522968 1 + T C rs147221808 26522966 + 26522946 26522986 41 GATGACATGGAGCTCGAAGACCTGAGAAGGAAAAAAAGAAG GATGACATGGAGCTCGAAGACCCGAGAAGGAAAAAAAGAAG < 41bp 0.594539427172726 0.807302404191566 0.1955727 0.14172012 prediction 0.425525954037681 Functional Gain - HCG11 ENSG00000228223 ncRNA_exonic Human lincRNA chr6:26522966 chr6:26522968 . . 0 23 hm5C_associated_SNPs_123249 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26522942-26522969
64251 chr2 187370306 187370306 1 + A G COAD 187370303 + 187370283 187370323 41 GAAAGAAGGAAAGCTGACTTCAAAGCAGGGAAAGCACTAGT GAAAGAAGGAAAGCTGACTTCAAGGCAGGGAAAGCACTAGT < 41bp 0.536062883376576 0.748814770182562 0.48403683 0.37501797 prediction 0.425503773611971 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187370303 chr2:187370306 synonymous SNV . 0 24 hm5C_associated_SNPs_123253 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:187370238-187370312
64251 chr9 138011566 138011566 1 + C T STAD 138011565 + 138011545 138011585 41 ACAGAGACCATCCTCAAGACCCGCAGCCTGGACTATGCCGG ACAGAGACCATCCTCAAGACCTGCAGCCTGGACTATGCCGG < 41bp 0.608880395558568 0.821629500594521 0.01987961 0.03974524 prediction 0.425498210071907 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011565 chr9:138011566 nonsynonymous SNV 0.996 5 22 hm5C_associated_SNPs_123255 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:138011536-138011664
64251 chr19 47865872 47865872 1 + C T rs199929866 47865871 + 47865851 47865891 41 AGTCTGCTTCCGCCTCTATGCCGAATCGGACTATGATGCCT AGTCTGCTTCCGCCTCTATGCTGAATCGGACTATGATGCCT < 41bp 0.612359937989927 0.825104682705721 0.015503973 0.046216816 prediction 0.425489489431587 Functional Gain - DHX34 ENSG00000134815 CDS Human protein_coding chr19:47865871 chr19:47865872 synonymous SNV . 0 22 hm5C_associated_SNPs_123256 0 0 7 FMR1 POSTAR2 GSE39682,GSM977616 chr19:47865844-47865881
64251 chr19 42584374 42584374 1 + C G COAD 42584370 + 42584350 42584390 41 CCTTCAACTCACCTGCCAACCTGGCCCGCCACCGGCTCACA CCTTCAACTCACCTGCCAACCTGGGCCGCCACCGGCTCACA < 41bp 0.654128726593488 0.86686696460459 0.07799706 0.57633144 prediction 0.425476476022203 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42584370 chr19:42584374 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_123259 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:42584318-42584376
64251 chr10 5014793 5014793 1 + C T LUAD 5014792 + 5014772 5014812 41 CCAGGGTGGACCCGAACTCCCCGGTGCTCTTGGAGGACCCA CCAGGGTGGACCCGAACTCCCTGGTGCTCTTGGAGGACCCA < 41bp 0.476592938608876 0.712738205330515 0.43228507 0.3024266 prediction 0.42547641066103 Functional Gain - AKR1C1 ENSG00000187134 CDS Human protein_coding chr10:5014792 chr10:5014793 nonsynonymous SNV 0.717 4 22 hm5C_associated_SNPs_123260 0 0 1 RPS3 POSTAR2 ENCODE chr10:5014775-5014794
64251 chrX 12735839 12735839 1 + C A OV 12735838 + 12735818 12735858 41 CCCCCGCTGGGGGCTTGCCTCCAAAGTCCTCGCACGCCCTG CCCCCGCTGGGGGCTTGCCTCAAAAGTCCTCGCACGCCCTG < 41bp 0.471284123612008 0.712729468968053 0.43071312 0.89590013 prediction 0.425458937936106 Functional Gain - FRMPD4 ENSG00000169933 CDS Human protein_coding chrX:12735838 chrX:12735839 nonsynonymous SNV 0.894 0 22 hm5C_associated_SNPs_123263 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chrX:12735839-12735840
64251 chr17 40715174 40715174 1 + C T BRCA 40715173 + 40715153 40715193 41 CTCCACGATCAGGCCAGCTTCCCCCGTGGCCGGGTCTCCAA CTCCACGATCAGGCCAGCTTCTCCCGTGGCCGGGTCTCCAA < 41bp 0.453043081563678 0.712728763748202 0.08682719 0.22314551 prediction 0.425457527496404 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40715173 chr17:40715174 synonymous SNV . 0 22 hm5C_associated_SNPs_123264 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:40715160-40715209
64251 chr16 2815105 2815105 1 + A G UCEC 2815102 + 2815082 2815122 41 GGTCAGAATCATCAGTTGATCAGAAAACTGTGGCTCGGACT GGTCAGAATCATCAGTTGATCAGGAAACTGTGGCTCGGACT < 41bp 0.579179286767514 0.791904276845159 0.5232362 0.8816232 prediction 0.425449980155292 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815102 chr16:2815105 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_123268 0 0 33 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2815104-2815130
64251 chr19 17452019 17452019 1 + C T PAAD 17452018 + 17451998 17452038 41 AACAAGTCGGACCTGCTGTCCCCGGAGGGCCCAGGTCCCGG AACAAGTCGGACCTGCTGTCCTCGGAGGGCCCAGGTCCCGG < 41bp 0.605660761777417 0.818385106895646 0.10060999 0.2616387 prediction 0.42544869023646 Functional Gain - GTPBP3 ENSG00000130299 CDS Human protein_coding chr19:17452018 chr19:17452019 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_123269 0 0 2 DDX6 POSTAR2 ENCODE chr19:17452009-17452060
64251 chr17 27027391 27027391 1 + C A UCEC 27027387 + 27027367 27027407 41 TGACACGGGCTGTGAATGCCCTGCCTCAGAACATGACTTCA TGACACGGGCTGTGAATGCCCTGCATCAGAACATGACTTCA < 41bp 0.295385237790432 0.712722802500554 0.039616346 0.047473073 prediction 0.425445605001109 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27027387 chr17:27027391 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_123270 0 0 8 RTCB POSTAR2 GSE38201,GSM936508 chr17:27027366-27027393
64251 chr3 44879825 44879825 1 + A G COAD 44879822 + 44879802 44879842 41 TGAGCAGCTGAACATGCTCACAGAGGCCTCAAAAAAACACT TGAGCAGCTGAACATGCTCACAGGGGCCTCAAAAAAACACT < 41bp 0.491994545910276 0.712719047262971 0.89300317 0.9096665 prediction 0.425438094525941 Functional Gain - KIF15 ENSG00000163808 CDS Human protein_coding chr3:44879822 chr3:44879825 nonsynonymous SNV 0.802 1 24 hm5C_associated_SNPs_123271 0 0 1 AARS POSTAR2 ENCODE chr3:44879824-44879886
64251 chr11 86123501 86123501 1 + A G GBM 86123498 + 86123478 86123518 41 TTAAGCAAGAGGAATATTCCCGGAGTCTCCTGAAACAAATG TTAAGCAAGAGGAATATTCCCGGGGTCTCCTGAAACAAATG < 41bp 0.564126599490666 0.77684555881883 0.87073237 0.91720414 prediction 0.425437918656329 Functional Gain - CCDC81 ENSG00000149201 CDS Human protein_coding chr11:86123498 chr11:86123501 nonsynonymous SNV 0.977 0 24 hm5C_associated_SNPs_123272 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr11:86123490-86123515
64251 chr12 6500553 6500553 1 + T C rs551683183 6500551 + 6500531 6500571 41 GTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGGG GTGGACTGAGGTAGACCCTGCACGAAGATGAAATTATAGGG < 41bp 0.497723710826662 0.712716603064833 0.16471168 0.13218185 prediction 0.425433206129666 Functional Gain - LTBR ENSG00000111321 UTR3 Human protein_coding chr12:6500551 chr12:6500553 . . 0 23 hm5C_associated_SNPs_123273 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:6500528-6500555
64251 chr10 126523333 126523333 1 + C T rs35870438 126523332 + 126523312 126523352 41 CAATTATGCTTCCACCAGTGCCGGACTGAAGTATCCTGGAA CAATTATGCTTCCACCAGTGCTGGACTGAAGTATCCTGGAA < 41bp 0.596111501647374 0.808822962052422 0.6821588 0.37471926 prediction 0.425422920810097 Functional Gain - ABRAXAS2 ENSG00000165660 CDS Human protein_coding chr10:126523332 chr10:126523333 synonymous SNV . 0 22 hm5C_associated_SNPs_123274 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:126523290-126523352
64251 chr4 147108527 147108527 1 + C T UCEC 147108526 + 147108506 147108546 41 AAGTATGGGGATGCATTTATCCGAGGAAACAATGGTAACAT AAGTATGGGGATGCATTTATCTGAGGAAACAATGGTAACAT < 41bp 0.561012755011203 0.773722528522436 0.9282917 0.83821666 prediction 0.425419547022465 Functional Gain - LSM6 ENSG00000164167 CDS Human protein_coding chr4:147108526 chr4:147108527 stopgain 0.997 1 22 hm5C_associated_SNPs_123275 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:147108516-147108539
64251 chr19 10225223 10225223 1 + C T UCEC 10225222 + 10225202 10225242 41 GTGATGCGGGGCCTCATGCCCCTGGCCTTCTGTGTCCACCC GTGATGCGGGGCCTCATGCCCTTGGCCTTCTGTGTCCACCC < 41bp 0.496595380920104 0.712707925236324 0.34755874 0.38394314 prediction 0.425415850472647 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225222 chr19:10225223 synonymous SNV . 0 22 hm5C_associated_SNPs_123276 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10225186-10225268
64251 chr10 60047332 60047332 1 + T C LIHC 60047329 + 60047309 60047349 41 TTCTCTTCCTAGTTCCCATTCTGTGATGGGGCTCACACAAA TTCTCTTCCTAGTTCCCATTCTGCGATGGGGCTCACACAAA < 41bp 0.519646828053465 0.732347727544284 0.11413026 0.060394496 prediction 0.425401798981639 Functional Gain - CISD1 ENSG00000122873 CDS Human protein_coding chr10:60047329 chr10:60047332 synonymous SNV . 0 24 hm5C_associated_SNPs_123279 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:60047320-60047340
64251 chr1 113235477 113235477 1 + C T PRAD 113235476 + 113235456 113235496 41 CTGCAGATGGAGCATGATATCCGGCACTATGACCTGGAGTC CTGCAGATGGAGCATGATATCTGGCACTATGACCTGGAGTC < 41bp 0.588299662942454 0.800999332714524 0.7900051 0.34357858 prediction 0.425399339544139 Functional Gain - MOV10 ENSG00000155363 CDS Human protein_coding chr1:113235476 chr1:113235477 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_123281 0 0 10 BUD13 POSTAR2 ENCODE chr1:113235469-113235534
64251 chr16 698400 698400 1 + T G rs45598439 698397 + 698377 698417 41 CGTCTGACCTCAGCCCTGCTCACTGTGCCCAGGGACCAGCG CGTCTGACCTCAGCCCTGCTCACGGTGCCCAGGGACCAGCG < 41bp 0.697727050773349 0.910424940043715 0.20842782 0.9059861 prediction 0.425395778540733 Functional Gain - MCRIP2 ENSG00000172366 UTR3 Human protein_coding chr16:698397 chr16:698400 . . 0 24 hm5C_associated_SNPs_123282 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:698323-698415
64251 chrX 129147755 129147755 1 + C T BRCA 129147754 + 129147734 129147774 41 TTCTCGCTCCCGTCCCCACTCCGGTTCTGGCTCCCATGCCA TTCTCGCTCCCGTCCCCACTCTGGTTCTGGCTCCCATGCCA < 41bp 0.487411116826367 0.712691197482654 0.49676389 0.10523072 prediction 0.425382394965307 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147754 chrX:129147755 nonsynonymous SNV 0.025 3 22 hm5C_associated_SNPs_123285 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:129147745-129147790
64251 chr8 146278777 146278777 1 + T C COAD 146278774 + 146278754 146278794 41 ATGCACTCCTTGTTTGGAGACTATAGGGCTCAGATGGAAGC ATGCACTCCTTGTTTGGAGACTACAGGGCTCAGATGGAAGC < 41bp 0.56016677320147 0.772849014020937 0.2848618 0.761667 prediction 0.425364481638935 Functional Gain - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278774 chr8:146278777 synonymous SNV . 0 24 hm5C_associated_SNPs_123287 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:146278744-146278786
64251 chr19 19638843 19638843 1 + C T COAD 19638842 + 19638822 19638862 41 GAGTCTGTGTTCCACACAACCCGCTGGGTGCCCCCCTTGAT GAGTCTGTGTTCCACACAACCTGCTGGGTGCCCCCCTTGAT < 41bp 0.465922902052431 0.712671269661897 0.40631342 0.3474402 prediction 0.425342539323794 Functional Gain - NDUFA13 ENSG00000186010 CDS Human protein_coding chr19:19638842 chr19:19638843 nonsynonymous SNV 0.377 4 22 hm5C_associated_SNPs_123291 0 0 15 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:19638813-19638912
64251 chr16 31139380 31139380 1 + C A COAD 31139379 + 31139359 31139399 41 GTCCCCGACCAGGGTCAGTGCCAGTGGCGGCAGCCCCCCGG GTCCCCGACCAGGGTCAGTGCAAGTGGCGGCAGCCCCCCGG < 41bp 0.631253781131254 0.843921901320909 0.35944322 0.82384086 prediction 0.42533624037931 Functional Gain - KAT8 ENSG00000103510 CDS Human protein_coding chr16:31139379 chr16:31139380 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_123292 0 0 2 DDX24 POSTAR2 ENCODE chr16:31139369-31139425
64251 chr1 155023107 155023107 1 - G A SKCM 155023108 - 155023088 155023128 41 GCAGCCGCGGTGCAGGATATCCGCCAGCGGGTGGCGCTGTT GCAGCCGCGGTGCAGGATATCTGCCAGCGGGTGGCGCTGTT < 41bp 0.506660124001448 0.719326284006877 0.35608578 0.18926528 prediction 0.425332320010857 Functional Gain - DCST1 ENSG00000163357 CDS Human protein_coding chr1:155023108 chr1:155023107 synonymous SNV . 0 22 hm5C_associated_SNPs_123295 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155023105-155023136
64251 chr17 45994103 45994103 1 + C T rs137884512 45994102 + 45994082 45994122 41 CGTCAACAACCTTGTGAACGCCAGTGACACCGGGGCCCCTA CGTCAACAACCTTGTGAACGCTAGTGACACCGGGGCCCCTA < 41bp 0.601524680867866 0.814183988910987 0.48659828 0.35410845 prediction 0.425318616086242 Functional Gain - SP2 ENSG00000167182 CDS Human protein_coding chr17:45994102 chr17:45994103 synonymous SNV . 0 22 hm5C_associated_SNPs_123298 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:45994097-45994127
64251 chr20 44048183 44048183 1 + C T rs574183358 44048182 + 44048162 44048202 41 CTGAAGGCAGATCGCTTGTTCCACACCAGCTACCACTCCCA CTGAAGGCAGATCGCTTGTTCTACACCAGCTACCACTCCCA < 41bp 0.576558409368757 0.789217628649211 0.057375968 0.32561362 prediction 0.425318438560907 Functional Gain - PIGT ENSG00000124155 CDS Human protein_coding chr20:44048182 chr20:44048183 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_123299 2 0 6 CSTF2T POSTAR2 GSE37401,GSM917677 chr20:44048156-44048191
64251 chr1 46877885 46877885 1 + C G rs75429705 46877881 + 46877861 46877901 41 ATGTGGTGCTGACCCCCATGCTGGCCCCTGCTCTGGACTTG ATGTGGTGCTGACCCCCATGCTGGGCCCTGCTCTGGACTTG < 41bp 0.666194328030859 0.878844606885694 0.2656839 0.61694366 prediction 0.425300557709671 Functional Gain - FAAH ENSG00000117480 CDS Human protein_coding chr1:46877881 chr1:46877885 nonsynonymous SNV 0.981 0 25 hm5C_associated_SNPs_123304 0 0 4 BUD13 POSTAR2 ENCODE chr1:46877838-46877909
64251 chr4 151504922 151504922 1 + A G UCEC 151504919 + 151504899 151504939 41 CGCCTGCTGATGGGCGGCTGCCGAAACAAGTGCCTCTCAGT CGCCTGCTGATGGGCGGCTGCCGGAACAAGTGCCTCTCAGT < 41bp 0.473000629490021 0.712650070918856 0.4661398 0.857427 prediction 0.425300141837712 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504919 chr4:151504922 synonymous SNV . 0 24 hm5C_associated_SNPs_123305 0 0 4 EIF3A POSTAR2 GSE65004,GSM1585664 chr4:151504900-151505020
64251 chrX 47086497 47086497 1 + C T UCEC 47086496 + 47086476 47086516 41 GCCCTTTTGAGCCACGCACCCCGGTGAGGCTGGTGGGTGGG GCCCTTTTGAGCCACGCACCCTGGTGAGGCTGGTGGGTGGG < 41bp 0.463386004488654 0.712645114760091 0.24698344 0.24869308 prediction 0.425290229520182 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47086496 chrX:47086497 stopgain 1.000 2 22 hm5C_associated_SNPs_123308 1 0 1 DDX24 POSTAR2 ENCODE chrX:47086478-47086509
64251 chr3 127335869 127335869 1 + C T SKCM 127335868 + 127335848 127335888 41 GTGGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAGCAG GTGGGCCTCACGGCGTATGTCTAGCGGCACCCTGTCAGCAG < 41bp 0.602019186051781 0.814663496974263 0.6084686 0.27497 prediction 0.425288621844963 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127335868 chr3:127335869 stopgain 0.009 1 22 hm5C_associated_SNPs_123309 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:127335863-127335882
64251 chr22 23524073 23524073 1 + T A rs574384780 23524069 + 23524049 23524089 41 GCACCTCTGAGCAGGAGAAGCGCCTTACCTGGCCCCGCAGG GCACCTCTGAGCAGGAGAAGCGCCATACCTGGCCCCGCAGG < 41bp 0.371492934227411 0.712625974176015 0.6125479 0.5592615 prediction 0.42525194835203 Functional Gain - BCR ENSG00000186716 CDS Human protein_coding chr22:23524069 chr22:23524073 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_123314 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:23524050-23524077
64251 chr5 133887867 133887867 1 + C T rs148698918 133887866 + 133887846 133887886 41 GAAAGGTGTGCAGGTGCCTGCCGGGGCAGAGGCCATCCCAG GAAAGGTGTGCAGGTGCCTGCTGGGGCAGAGGCCATCCCAG < 41bp 0.572021353859851 0.784644764618635 0.90370524 0.8093151 prediction 0.425246821517569 Functional Gain - JADE2 ENSG00000043143 CDS Human protein_coding chr5:133887866 chr5:133887867 synonymous SNV . 0 22 hm5C_associated_SNPs_123315 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr5:133887861-133887886
64251 chr2 122522828 122522828 1 + T C UCEC 122522826 + 122522806 122522846 41 CTCAACCTGAAAAATGACTCCCTGAGGAAGCGCTACGACGG CTCAACCTGAAAAATGACTCCCCGAGGAAGCGCTACGACGG < 41bp 0.431853484965354 0.712622180316422 0.06823468 0.04229951 prediction 0.425244360632844 Functional Gain - TSN ENSG00000211460 CDS Human protein_coding chr2:122522826 chr2:122522828 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_123317 0 0 20 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:122522814-122522835
64251 chr2 48026311 48026311 1 + T C STAD 48026308 + 48026288 48026328 41 CCGATTTTGATGCATCTACACTCTATGTGCCTGAGGATTTC CCGATTTTGATGCATCTACACTCCATGTGCCTGAGGATTTC < 41bp 0.572878556265607 0.78550061657632 0.9296137 0.9616146 prediction 0.425244120621426 Functional Gain - MSH6 ENSG00000116062 CDS Human protein_coding chr2:48026308 chr2:48026311 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_123318 3 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:48026260-48026369
64251 chr4 123664334 123664334 1 + T C rs17006094 123664331 + 123664311 123664351 41 TTAATTGAAAAATGTATAAACAGTAAGCGGTTGGTAATCGG TTAATTGAAAAATGTATAAACAGCAAGCGGTTGGTAATCGG < 41bp 0.544472986432323 0.757090552583615 0.0969443 0.057590634 prediction 0.425235132302585 Functional Gain - BBS12 ENSG00000181004 CDS Human protein_coding chr4:123664331 chr4:123664334 synonymous SNV . 0 24 hm5C_associated_SNPs_123319 1 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr4:123664332-123664368
64251 chr1 898153 898153 1 + C A rs147703918 898152 + 898132 898172 41 GGCCACGTGGATGCCGAGAGCCTGGTGAGGCACCACCCTGA GGCCACGTGGATGCCGAGAGCATGGTGAGGCACCACCCTGA < 41bp 0.453695761367635 0.712599034105605 0.81308365 0.8985518 prediction 0.42519806821121 Functional Gain - KLHL17 ENSG00000187961 CDS Human protein_coding chr1:898152 chr1:898153 nonsynonymous SNV 0.979 4 22 hm5C_associated_SNPs_123327 0 0 6 BUD13 POSTAR2 ENCODE chr1:898090-898154
64251 chr3 182988348 182988348 1 + C T UCEC 182988347 + 182988327 182988367 41 AGCTTACCCTGACTACACAGCCGGAGCTGCCTATGTAATCT AGCTTACCCTGACTACACAGCTGGAGCTGCCTATGTAATCT < 41bp 0.596857253432814 0.809452648509619 0.2571116 0.10338938 prediction 0.425190790153611 Functional Gain - B3GNT5 ENSG00000176597 CDS Human protein_coding chr3:182988347 chr3:182988348 synonymous SNV . 0 22 hm5C_associated_SNPs_123330 0 0 1 YBX3 POSTAR2 ENCODE chr3:182988322-182988368
64251 chr19 42392168 42392168 1 + C T SKCM 42392167 + 42392147 42392187 41 CAGGGAGATGGAAGACTTCGCCCGAGGGGCGGTGAGTGGAC CAGGGAGATGGAAGACTTCGCTCGAGGGGCGGTGAGTGGAC < 41bp 0.55664617948465 0.769225235188341 0.2557369 0.12010923 prediction 0.425158111407383 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42392167 chr19:42392168 synonymous SNV . 0 22 hm5C_associated_SNPs_123337 0 0 8 BUD13 POSTAR2 ENCODE chr19:42392146-42392176
64251 chr17 42239515 42239515 1 + C G rs557276595 42239514 + 42239494 42239534 41 TTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCC TTTGCCGTTGGCACCAGAATCGGGCCGGAGACTGGCTCTCC < 41bp 0.665235052262378 0.877813127280041 0.7151124 0.92093647 prediction 0.425156150035326 Functional Gain - C17orf53 ENSG00000125319 UTR3 Human protein_coding chr17:42239514 chr17:42239515 . . 0 22 hm5C_associated_SNPs_123338 0 0 1 RBM15 POSTAR2 ENCODE chr17:42239495-42239537
64251 chr20 43034783 43034783 1 + C T rs736823 43034782 + 43034762 43034802 41 TGCCATCTGCGGGGACCGGGCCACGGGCAAACACTACGGTG TGCCATCTGCGGGGACCGGGCTACGGGCAAACACTACGGTG < 41bp 0.459018210998301 0.712576874868795 0.9064674 0.8945857 prediction 0.42515374973759 Functional Gain - HNF4A ENSG00000101076 CDS Human protein_coding chr20:43034782 chr20:43034783 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_123339 3 0 1 EFTUD2 POSTAR2 ENCODE chr20:43034780-43034839
64251 chr7 135304215 135304215 1 + C T rs11550518 135304214 + 135304194 135304234 41 AGAGTTAATGCCTGTGGTCGCCGGGGCAGTGTTCACACTGA AGAGTTAATGCCTGTGGTCGCTGGGGCAGTGTTCACACTGA < 41bp 0.578710896148833 0.791282039754454 0.9149195 0.6685839 prediction 0.425142287211243 Functional Gain - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135304214 chr7:135304215 synonymous SNV . 0 22 hm5C_associated_SNPs_123344 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:135304167-135304228
64251 chr3 32933023 32933023 1 + C A COAD 32933019 + 32932999 32933039 41 ACCACCGGCTCCTGGTTATTCACCCCGACTGCCAGTCGGCA ACCACCGGCTCCTGGTTATTCACCACGACTGCCAGTCGGCA < 41bp 0.27893568892215 0.712566863321762 0.11544034 0.061944127 prediction 0.425133726643525 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32933019 chr3:32933023 nonsynonymous SNV 0.983 4 25 hm5C_associated_SNPs_123346 0 0 2 DDX6 POSTAR2 ENCODE chr3:32933013-32933080
64251 chr5 139917069 139917069 1 + C T DLBC 139917068 + 139917048 139917088 41 ATTGGAACAGAGAGACTGGCCCGAATTCGGCAAGGAGGGTC ATTGGAACAGAGAGACTGGCCTGAATTCGGCAAGGAGGGTC < 41bp 0.463127771383399 0.712560678117832 0.19483903 0.19549674 prediction 0.425121356235663 Functional Gain - ANKHD1;ANKHD1-EIF4EBP3 ENSG00000131503;ENSG00000254996 CDS Human other chr5:139917068 chr5:139917069 stopgain 0.996 1 22 hm5C_associated_SNPs_123348 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:139917069-139917094
64251 chr17 6544532 6544532 1 + C T STAD 6544531 + 6544511 6544551 41 GCCGGGGGGAAAAGCTGGTGCCCCGACTGCGTGCAGGGTGA GCCGGGGGGAAAAGCTGGTGCTCCGACTGCGTGCAGGGTGA < 41bp 0.566742701025841 0.779299178502757 0.15506712 0.15835494 prediction 0.425112954953832 Functional Gain - TXNDC17 ENSG00000129235 CDS Human protein_coding chr17:6544531 chr17:6544532 nonsynonymous SNV 0.926 2 22 hm5C_associated_SNPs_123350 0 0 6 DDX3X POSTAR2 ENCODE chr17:6544490-6544537
64251 chr5 162945258 162945258 1 + C G STAD 162945257 + 162945237 162945277 41 AAATGCTCAGCTTGACTGCTCCAAATTGGAGACCTTGGGCA AAATGCTCAGCTTGACTGCTCGAAATTGGAGACCTTGGGCA < 41bp 0.645814303081288 0.858368868632382 0.043422163 0.25437787 prediction 0.425109131102189 Functional Gain - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945257 chr5:162945258 synonymous SNV . 0 22 hm5C_associated_SNPs_123352 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:162945201-162945298
64251 chr8 17402077 17402077 1 + C T SKCM 17402076 + 17402056 17402096 41 ACACTGGTCTTGCAGAATATCCCGATTTTTTTGCTGTGTGC ACACTGGTCTTGCAGAATATCTCGATTTTTTTGCTGTGTGC < 41bp 0.62330849656856 0.83585283199263 0.14772215 0.89752823 prediction 0.425088670848139 Functional Gain - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17402076 chr8:17402077 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_123354 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003587 chr8:17402071-17402092
64251 chr16 86546747 86546747 1 + C G rs558260073 86546746 + 86546726 86546766 41 CGGGTCACAGGGACCCTGGACCGGCACAAGAAACTGCTTTC CGGGTCACAGGGACCCTGGACGGGCACAAGAAACTGCTTTC < 41bp 0.403405544248772 0.712539902604465 0.6478425 0.6835162 prediction 0.42507980520893 Functional Gain - FOXF1 ENSG00000103241 UTR3 Human protein_coding chr16:86546746 chr16:86546747 . . 0 22 hm5C_associated_SNPs_123355 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:86546690-86546752
64251 chr12 53819354 53819354 1 + C T BLCA 53819353 + 53819333 53819373 41 GCTGCCTGAGCTGTGTTTCTCCCAGGTGCCCCAGGGAGGGA GCTGCCTGAGCTGTGTTTCTCTCAGGTGCCCCAGGGAGGGA < 41bp 0.575102009905886 0.787634700734767 0.39294085 0.10227874 prediction 0.425065381657762 Functional Gain - AMHR2 ENSG00000135409 CDS Human protein_coding chr12:53819353 chr12:53819354 synonymous SNV . 0 22 hm5C_associated_SNPs_123362 0 0 1 RBM15 POSTAR2 ENCODE chr12:53819345-53819406
64251 chr22 46505851 46505851 1 + A G UCEC 46505848 + 46505828 46505868 41 ACTGAGTCACATCTGCTTCTCCCAGGTGGGGCTGGGGGCCC ACTGAGTCACATCTGCTTCTCCCGGGTGGGGCTGGGGGCCC < 41bp 0.456503929917039 0.712532250590313 0.4008218 0.75034046 prediction 0.425064501180626 Functional Gain - MIRLET7BHG ENSG00000197182 CDS Human lincRNA chr22:46505848 chr22:46505851 synonymous SNV . 0 24 hm5C_associated_SNPs_123363 0 0 3 U2AF2 POSTAR2 GSE83923,CSM2221662 chr22:46505850-46505851
64251 chr2 179407042 179407042 1 + C T UCEC 179407041 + 179407021 179407061 41 ACTGCAAGTAAGAGCCAATCCCGAAGCGGTTTGTTGCAGCC ACTGCAAGTAAGAGCCAATCCTGAAGCGGTTTGTTGCAGCC < 41bp 0.568918407522347 0.781445009806113 0.52247244 0.26676202 prediction 0.425053204567533 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179407041 chr2:179407042 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_123366 2 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:179406994-179407047
64251 chr2 96078441 96078441 1 + C T UCEC 96078440 + 96078420 96078460 41 TCCAGGTTTGTTACCTTTTACCCAGGGGATGTCATCCTAAC TCCAGGTTTGTTACCTTTTACTCAGGGGATGTCATCCTAAC < 41bp 0.451678486405409 0.712521364870019 0.06800562 0.012345225 prediction 0.425042729740039 Functional Gain - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96078440 chr2:96078441 nonsynonymous SNV 0.993 5 22 hm5C_associated_SNPs_123367 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:96078414-96078452
64251 chr1 93303161 93303161 1 + T C GBM 93303158 + 93303138 93303178 41 CTTACAAGAAACAGTTCTCTCAATACATAAAGAACAGCGTA CTTACAAGAAACAGTTCTCTCAACACATAAAGAACAGCGTA < 41bp 0.509367815675948 0.721886658703527 0.296816 0.42300257 prediction 0.425037686055157 Functional Gain - RPL5 ENSG00000122406 CDS Human protein_coding chr1:93303158 chr1:93303161 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_123368 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:93303160-93303180
64251 chr19 49459501 49459501 1 + C T COAD 49459500 + 49459480 49459520 41 TCCCCCCGAGAGGTCTTTTTCCGAGTGGCAGCTGACATGTT TCCCCCCGAGAGGTCTTTTTCTGAGTGGCAGCTGACATGTT < 41bp 0.593962748710085 0.806473483574249 0.90903807 0.83895844 prediction 0.42502146972833 Functional Gain - BAX ENSG00000087088 CDS Human protein_coding chr19:49459500 chr19:49459501 stopgain 1.000 1 22 hm5C_associated_SNPs_123370 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:49459451-49459546
64251 chr19 7976183 7976183 1 + C T LUAD 7976182 + 7976162 7976202 41 ACCAAGCCGGACTATGACATCCGGGCCGACGTATGGAGCCT ACCAAGCCGGACTATGACATCTGGGCCGACGTATGGAGCCT < 41bp 0.597691007092349 0.810200134689321 0.2126792 0.12043911 prediction 0.425018255193943 Functional Gain - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7976182 chr19:7976183 nonsynonymous SNV 0.904 4 22 hm5C_associated_SNPs_123373 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:7976165-7976192
64251 chrX 1520869 1520869 1 + C T rs187905786 1520868 + 1520848 1520888 41 TTTACAGACGCATTTCAGCCCCGCAGCAGGGGCTGGGGAGG TTTACAGACGCATTTCAGCCCTGCAGCAGGGGCTGGGGAGG < 41bp 0.471269609147011 0.712508637155179 0.078567535 0.13730752 prediction 0.425017274310358 Functional Gain - ASMTL-AS1 ENSG00000236017 ncRNA_exonic Human antisense chrX:1520868 chrX:1520869 . . 0 22 hm5C_associated_SNPs_123374 0 0 24 DDX42 POSTAR2 ENCODE chrX:1520840-1520915
64251 chr9 129594916 129594916 1 + T A SKCM 129594912 + 129594892 129594932 41 TCTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACACAAA TCTCCATTGTTGTCCAAGGCCACAATTTCCGGGCACACAAA < 41bp 0.375833561071545 0.712495764575827 0.042678952 0.062032342 prediction 0.424991529151654 Functional Gain - ZBTB43 ENSG00000169155 CDS Human protein_coding chr9:129594912 chr9:129594916 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_123380 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr9:129594900-129594920
64251 chr22 21380894 21380894 1 + C A LIHC 21380893 + 21380873 21380913 41 CACCCACTTGCCAACCCATTCCGGGAGCCTGTAGCCGTTCC CACCCACTTGCCAACCCATTCAGGGAGCCTGTAGCCGTTCC < 41bp 0.622122103934988 0.834615797675705 0.901559 0.9256895 prediction 0.424987387481435 Functional Gain - P2RX6 ENSG00000099957 CDS Human protein_coding chr22:21380893 chr22:21380894 synonymous SNV . 0 22 hm5C_associated_SNPs_123381 0 0 1 PRPF8 POSTAR2 ENCODE chr22:21380894-21380969
64251 chr9 119460577 119460577 1 + C T BRCA 119460576 + 119460556 119460596 41 GCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGA GCAAGGTATAAAGCAGTTCTCTAGGAGTATGGGCATGAGGA < 41bp 0.581904200705639 0.794374975723767 0.9231441 0.86246824 prediction 0.424941550036255 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119460576 chr9:119460577 stopgain 0.991 1 22 hm5C_associated_SNPs_123388 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:119460561-119460582
64251 chr12 132632238 132632238 1 + C G rs202227049 132632237 + 132632217 132632257 41 AGCCTGCTCCTGTCCCAGTTCCGGGAGTACCTGGACTACGA AGCCTGCTCCTGTCCCAGTTCGGGGAGTACCTGGACTACGA < 41bp 0.68781272433109 0.900279907150778 0.9126549 0.9259385 prediction 0.424934365639378 Functional Gain - NOC4L ENSG00000184967 CDS Human protein_coding chr12:132632237 chr12:132632238 nonsynonymous SNV 0.948 1 22 hm5C_associated_SNPs_123389 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221666 chr12:132632220-132632240
64251 chr10 5141639 5141639 1 + C T rs140580498 5141638 + 5141618 5141658 41 AAGTACAAGCCTGTCTGCAACCAGGTGAGCTCCCTTGGCCT AAGTACAAGCCTGTCTGCAACTAGGTGAGCTCCCTTGGCCT < 41bp 0.600970156836374 0.813435241579651 0.9360868 0.88058376 prediction 0.424930169486552 Functional Gain - AKR1C3 ENSG00000196139 CDS Human protein_coding chr10:5141638 chr10:5141639 stopgain 1.000 1 22 hm5C_associated_SNPs_123390 0 0 3 PRPF8 POSTAR2 ENCODE chr10:5141628-5141692
64251 chr18 32722543 32722543 1 + C G rs138732589 32722542 + 32722522 32722562 41 AGCCTGCAAAGAGAACTTTCCCCAGTCACCATAGACCATTC AGCCTGCAAAGAGAACTTTCCGCAGTCACCATAGACCATTC < 41bp 0.435737339240536 0.712460019161691 0.049642205 0.15878174 prediction 0.424920038323382 Functional Gain - MAPRE2 ENSG00000166974 UTR3 Human protein_coding chr18:32722542 chr18:32722543 . . 0 22 hm5C_associated_SNPs_123394 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr18:32722522-32722579
64251 chr3 10194249 10194249 1 + T A rs142728549 10194245 + 10194225 10194265 41 GGAGTGCAGTGGTGCGATCTCTGCTCACTACAAGCTCTGCC GGAGTGCAGTGGTGCGATCTCTGCACACTACAAGCTCTGCC < 41bp 0.651813756127538 0.864263704351077 0.062019676 0.09919956 prediction 0.424899896447078 Functional Gain - VHL ENSG00000134086 downstream Human protein_coding chr3:10194245 chr3:10194249 . . 0 25 hm5C_associated_SNPs_123398 1 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr3:10194240-10194300
64251 chr6 26200080 26200080 1 + C T rs421153 26200079 + 26200059 26200099 41 CTCCAGGGAGATCCAGACGGCCGTACGCCTGCTGCTGCCCG CTCCAGGGAGATCCAGACGGCTGTACGCCTGCTGCTGCCCG < 41bp 0.507101705778927 0.719551258112679 0.18422163 0.13717327 prediction 0.424899104667503 Functional Gain - HIST1H2BF ENSG00000197846 CDS Human other chr6:26200079 chr6:26200080 synonymous SNV . 0 22 hm5C_associated_SNPs_123399 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26200060-26200120
64251 chr7 73768332 73768332 1 + C A LGG 73768331 + 73768311 73768351 41 TGATGGGGCGGTGGCGGGCACCAGGTATGGTGGGCTTCTTC TGATGGGGCGGTGGCGGGCACAAGGTATGGTGGGCTTCTTC < 41bp 0.439921450062 0.712436749126655 0.79839945 0.79602057 prediction 0.42487349825331 Functional Gain - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73768331 chr7:73768332 synonymous SNV . 0 22 hm5C_associated_SNPs_123404 0 0 1 EIF3H POSTAR2 ENCODE chr7:73768221-73768332
64251 chr19 18974273 18974273 1 + C T UCEC 18974272 + 18974252 18974292 41 GCGTCATCATTGTGGGCAACCCGAAGGCACTATCAAAGCAG GCGTCATCATTGTGGGCAACCTGAAGGCACTATCAAAGCAG < 41bp 0.453295383735858 0.71243574448039 0.3039058 0.3044593 prediction 0.42487148896078 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18974272 chr19:18974273 nonsynonymous SNV 0.955 4 22 hm5C_associated_SNPs_123406 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:18974256-18974279
64251 chr10 103360560 103360560 1 + C A rs143867323 103360559 + 103360539 103360579 41 TGGCAGCTTGAAGTAGGAGACCCAGCGCCCCTAGGAGCAGG TGGCAGCTTGAAGTAGGAGACACAGCGCCCCTAGGAGCAGG < 41bp 0.439092987717589 0.712435631458976 0.27711308 0.18147805 prediction 0.424871262917953 Functional Gain - DPCD ENSG00000166171 CDS Human protein_coding chr10:103360559 chr10:103360560 nonsynonymous SNV 0.961 1 22 hm5C_associated_SNPs_123407 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:103360560-103360580
64251 chr17 4796286 4796286 1 + C T rs11556635 4796285 + 4796265 4796305 41 GCCGTCCAGTCTCCTCCAAACCGGACAGCTCCCCTGTGCTC GCCGTCCAGTCTCCTCCAAACTGGACAGCTCCCCTGTGCTC < 41bp 0.611759238526952 0.824188741196207 0.37551293 0.35366145 prediction 0.424859005338511 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4796285 chr17:4796286 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_123409 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:4796285-4796286
64251 chr18 67992733 67992733 1 + C A THCA 67992729 + 67992709 67992749 41 GTAGACCAGGACCTAGTTGTCGCCCCAGAGATCTTCGTGGA GTAGACCAGGACCTAGTTGTCGCCACAGAGATCTTCGTGGA < 41bp 0.729835221216017 0.942264296211613 0.38742042 0.37120476 prediction 0.424858149991191 Functional Gain - SOCS6 ENSG00000170677 CDS Human protein_coding chr18:67992729 chr18:67992733 nonsynonymous SNV 0.130 1 25 hm5C_associated_SNPs_123410 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:67992709-67992738
64251 chr17 2221222 2221222 1 + C T UCEC 2221221 + 2221201 2221241 41 CTGATGCTTTAGAAAGGAAGCCGAAAGCTGTTGTTACTCAC CTGATGCTTTAGAAAGGAAGCTGAAAGCTGTTGTTACTCAC < 41bp 0.603176679662101 0.815605289332441 0.3042644 0.30723572 prediction 0.424857219340681 Functional Gain - SRR ENSG00000167720 CDS Human protein_coding chr17:2221221 chr17:2221222 nonsynonymous SNV 0.990 2 22 hm5C_associated_SNPs_123411 0 0 1 FUS POSTAR2 DRA001158,DRS012384 chr17:2221187-2221226
64251 chr10 26994239 26994239 1 + T C UCEC 26994236 + 26994216 26994256 41 TTTCATCACACAACCCCAGACAGTAAAACACACAGTGGTGA TTTCATCACACAACCCCAGACAGCAAAACACACAGTGGTGA < 41bp 0.48382120549962 0.712419378006926 0.49964815 0.2723046 prediction 0.424838756013852 Functional Gain - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26994236 chr10:26994239 synonymous SNV . 0 24 hm5C_associated_SNPs_123414 0 0 3 CSTF2 POSTAR2 GSE37401,GSM917676 chr10:26994219-26994257
64251 chr3 49213183 49213183 1 + C T LGG 49213182 + 49213162 49213202 41 GTTTGTTATTGGGGGTGTGGCCCAGGGCCCCAGTCAAGCCG GTTTGTTATTGGGGGTGTGGCTCAGGGCCCCAGTCAAGCCG < 41bp 0.576746992824033 0.789162923452728 0.5866987 0.6082184 prediction 0.42483186125739 Functional Gain - KLHDC8B ENSG00000185909 CDS Human protein_coding chr3:49213182 chr3:49213183 synonymous SNV . 0 22 hm5C_associated_SNPs_123417 0 0 4 HNRNPM POSTAR2 ENCODE chr3:49213171-49213260
64251 chr4 156634382 156634382 1 + A G UCEC 156634379 + 156634359 156634399 41 ACCTCTCAGACATCCCAATTCACAATGCACTGAGGGATGTG ACCTCTCAGACATCCCAATTCACGATGCACTGAGGGATGTG < 41bp 0.55421556617134 0.766630317425203 0.1462217 0.33674943 prediction 0.424829502507726 Functional Gain - GUCY1A3 ENSG00000164116 CDS Human protein_coding chr4:156634379 chr4:156634382 nonsynonymous SNV 0.666 2 24 hm5C_associated_SNPs_123418 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:156634367-156634392
64251 chr12 54379327 54379327 1 + C T CESC 54379326 + 54379306 54379346 41 TGGAACAACCTGTTGGCAGGCCGCTGTCCTCCTGCTCCTAC TGGAACAACCTGTTGGCAGGCTGCTGTCCTCCTGCTCCTAC < 41bp 0.564633529691537 0.777046181993378 0.18003795 0.13894185 prediction 0.424825304603682 Functional Gain - HOXC10 ENSG00000180818 CDS Human protein_coding chr12:54379326 chr12:54379327 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_123419 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:54379312-54379343
64251 chr15 79165370 79165370 1 + A G UCEC 79165367 + 79165347 79165387 41 GAATCACTTATAAATGGCGCCGAAGCAGGACCCGAAGCCTA GAATCACTTATAAATGGCGCCGAGGCAGGACCCGAAGCCTA < 41bp 0.52419695467329 0.736606506836729 0.28797412 0.6070312 prediction 0.424819104326878 Functional Gain - MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79165367 chr15:79165370 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_123420 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819215 chr15:79165320-79165380
64251 chr1 35852656 35852656 1 + A G LIHC 35852653 + 35852633 35852673 41 TTCTTCAGTAGTGCCCTTGTCTCAGGGCCAAGTAATTGTAA TTCTTCAGTAGTGCCCTTGTCTCGGGGCCAAGTAATTGTAA < 41bp 0.563708917816068 0.776115526556113 0.06399417 0.16811532 prediction 0.42481321748009 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35852653 chr1:35852656 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_123424 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:35852621-35852817
64251 chr5 50683421 50683421 1 + C T UCEC 50683420 + 50683400 50683440 41 GTGTATCACATCGAGTGTTTCCGCTGTGTGGCCTGCAGCCG GTGTATCACATCGAGTGTTTCTGCTGTGTGGCCTGCAGCCG < 41bp 0.602936601728988 0.815343162615442 0.14258036 0.13949701 prediction 0.424813121772907 Functional Gain - ISL1 ENSG00000016082 CDS Human protein_coding chr5:50683420 chr5:50683421 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_123425 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:50683409-50683434
64251 chrX 109247361 109247361 1 + T G UCEC 109247357 + 109247337 109247377 41 CCACCAAGACCGTCATCTACCTGCTCAACCCCTGTCACCTG CCACCAAGACCGTCATCTACCTGCGCAACCCCTGTCACCTG < 41bp 0.508648454967878 0.721053810342515 0.099742204 0.17777371 prediction 0.424810710749274 Functional Gain - TMEM164 ENSG00000157600 CDS Human protein_coding chrX:109247357 chrX:109247361 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_123426 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:109247351-109247389
64251 chr11 44148425 44148425 1 + T C rs61733300 44148422 + 44148402 44148442 41 CTGGGCCAGGCAGTATTGAGCGATGTGTTACAAGCTGGCTG CTGGGCCAGGCAGTATTGAGCGACGTGTTACAAGCTGGCTG < 41bp 0.527520947192195 0.739922963935359 0.7861972 0.87244165 prediction 0.424804033486327 Functional Gain - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44148422 chr11:44148425 synonymous SNV . 0 24 hm5C_associated_SNPs_123428 1 0 3 SND1 POSTAR2 ENCODE chr11:44148375-44148436
64251 chr1 220978575 220978575 1 + C T UCEC 220978574 + 220978554 220978594 41 AACCACAGTGGACCCAGACACCGGTGTCATGAGCAGGAAGG AACCACAGTGGACCCAGACACTGGTGTCATGAGCAGGAAGG < 41bp 0.45939919495877 0.712393204430276 0.35355136 0.35411036 prediction 0.424786408860553 Functional Gain - MARC1 ENSG00000186205 CDS Human protein_coding chr1:220978574 chr1:220978575 synonymous SNV . 0 22 hm5C_associated_SNPs_123434 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:220978548-220978603
64251 chr16 89807131 89807131 1 + C A rs11649162 89807130 + 89807110 89807150 41 TCCTGAGCTAGTCTGGAAACCCTGACTTGGAAGCTGGCTGC TCCTGAGCTAGTCTGGAAACCATGACTTGGAAGCTGGCTGC < 41bp 0.466031598124982 0.712387345293931 0.26742882 0.3943226 prediction 0.424774690587863 Functional Gain - ZNF276 ENSG00000158805 UTR3 Human protein_coding chr16:89807130 chr16:89807131 . . 0 22 hm5C_associated_SNPs_123436 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:89807100-89807140
64251 chr16 847913 847913 1 + C G rs190105039 847912 + 847892 847932 41 GGCAGGAGCGAGGTCTGGTTCCGCTTCAACGAGGGTGTCTC GGCAGGAGCGAGGTCTGGTTCGGCTTCAACGAGGGTGTCTC < 41bp 0.392932247178596 0.712379656176808 0.36176953 0.8222444 prediction 0.424759312353615 Functional Gain - CHTF18 ENSG00000127586 CDS Human protein_coding chr16:847912 chr16:847913 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_123442 0 0 2 LSM11 POSTAR2 ENCODE chr16:847881-847959
64251 chr8 37971754 37971754 1 + C T SKCM 37971753 + 37971733 37971773 41 ATACTGGGAGTGCATGACAACCAGACAGAGACCTGGGAAAA ATACTGGGAGTGCATGACAACTAGACAGAGACCTGGGAAAA < 41bp 0.459625771660882 0.712376505757597 0.07830155 0.119886905 prediction 0.424753011515195 Functional Gain - ASH2L ENSG00000129691 CDS Human protein_coding chr8:37971753 chr8:37971754 synonymous SNV . 0 22 hm5C_associated_SNPs_123445 0 0 4 FMR1 POSTAR2 ENCODE chr8:37971729-37971787
64251 chr16 89778290 89778290 1 + A G rs201251363 89778287 + 89778267 89778307 41 GCCTGGGCCCGTGGGGGACGCACATGGTCCTGTTCGTACTC GCCTGGGCCCGTGGGGGACGCACGTGGTCCTGTTCGTACTC < 41bp 0.569277218975889 0.781651705208658 0.090852946 0.28644615 prediction 0.424748972465539 Functional Gain - VPS9D1 ENSG00000075399 CDS Human protein_coding chr16:89778287 chr16:89778290 synonymous SNV . 0 24 hm5C_associated_SNPs_123447 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr16:89778286-89778310
64251 chr19 50308734 50308734 1 + T C PAAD 50308732 + 50308712 50308752 41 CTGGCTGTGCAGACCAAGCGCGTGGCGGCGCAGGTGGACGG CTGGCTGTGCAGACCAAGCGCGCGGCGGCGCAGGTGGACGG < 41bp 0.626496233847768 0.838859981723359 0.65959185 0.84501874 prediction 0.424727495751181 Functional Gain - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50308732 chr19:50308734 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_123450 0 0 12 DDX24 POSTAR2 ENCODE chr19:50308709-50308750
64251 chr19 14512302 14512302 1 + T C SKCM 14512300 + 14512280 14512320 41 CCACCCAGCTGCTCTCAAACCTTGAAGATATCATGAGGATC CCACCCAGCTGCTCTCAAACCTCGAAGATATCATGAGGATC < 41bp 0.64950066885171 0.861862505243088 0.22028676 0.8457264 prediction 0.424723672782755 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512300 chr19:14512302 synonymous SNV . 0 23 hm5C_associated_SNPs_123452 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14512279-14512303
64251 chr6 27806539 27806539 1 + C G UCEC 27806538 + 27806518 27806558 41 GGCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTCCGT GGCAAGAAGCGCAAGCGCAGCGGCAAGGAGAGCTACTCCGT < 41bp 0.672092976133818 0.884445175956065 0.16531569 0.29668683 prediction 0.424704399644494 Functional Gain - HIST1H2BN ENSG00000233822 CDS Human protein_coding chr6:27806538 chr6:27806539 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_123457 0 0 2 GRWD1 POSTAR2 ENCODE chr6:27806406-27806541
64251 chr16 3043884 3043884 1 + C A rs2023874 3043883 + 3043863 3043903 41 AGGCAGGAGACTGGCGTGAACCCAGGAGGCGGAGCTTGCAG AGGCAGGAGACTGGCGTGAACACAGGAGGCGGAGCTTGCAG < 41bp 0.58250546194683 0.794853050112631 0.69459456 0.8633996 prediction 0.424695176331603 Functional Gain - LINC00514 ENSG00000262152 ncRNA_exonic Human processed_transcript chr16:3043883 chr16:3043884 . . 0 22 hm5C_associated_SNPs_123461 0 0 2 FUS POSTAR2 GSE43308,GSM1060381 chr16:3043880-3043900
64251 chrX 55784694 55784694 1 + T C COAD 55784691 + 55784671 55784711 41 GCCCTCAGCTTCTGCAGCTACTCTGATCAACATCCGCAATG GCCCTCAGCTTCTGCAGCTACTCCGATCAACATCCGCAATG < 41bp 0.539181139210027 0.751527515444535 0.090902925 0.061823636 prediction 0.424692752469015 Functional Gain - RRAGB ENSG00000083750 CDS Human protein_coding chrX:55784691 chrX:55784694 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_123462 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:55784683-55784721
64251 chr8 145535234 145535234 1 + A G STAD 145535231 + 145535211 145535251 41 GTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTC GTGGCTCAGCACATTCCATGCCCGAGTATAGCCGGCAGTTC < 41bp 0.462391328806522 0.712343350323895 0.0772461 0.32862917 prediction 0.424686700647789 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535231 chr8:145535234 nonsynonymous SNV 0.855 3 24 hm5C_associated_SNPs_123463 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:145535211-145535234
64251 chr7 16720963 16720963 1 + C G rs77834852 16720962 + 16720942 16720982 41 CATAGATGATGGTGACAAGACCAAGATGACCAACCACTGTG CATAGATGATGGTGACAAGACGAAGATGACCAACCACTGTG < 41bp 0.394284323317187 0.712336395861323 0.11945024 0.27788323 prediction 0.424672791722646 Functional Gain - BZW2 ENSG00000136261 CDS Human protein_coding chr7:16720962 chr7:16720963 synonymous SNV . 0 22 hm5C_associated_SNPs_123466 0 0 8 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:16720942-16720963
64251 chr1 201817629 201817629 1 + C A HNSC 201817625 + 201817605 201817645 41 TCAGCCATTGCCCACTGGGACTGGCCTGAAGCTTGGCCCCA TCAGCCATTGCCCACTGGGACTGGACTGAAGCTTGGCCCCA < 41bp 0.307895505406664 0.71232831746121 0.41015297 0.3383072 prediction 0.424656634922421 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201817625 chr1:201817629 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_123469 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:201817580-201817652
64251 chr19 50156212 50156212 1 + T A COAD 50156208 + 50156188 50156228 41 ACCACCCCGGCCAAGGATGCCGCGTCAGCCGGCCTGGGCTC ACCACCCCGGCCAAGGATGCCGCGACAGCCGGCCTGGGCTC < 41bp 0.682210977309054 0.894528959322763 0.7336651 0.8680788 prediction 0.424635964027418 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50156208 chr19:50156212 nonsynonymous SNV 0.071 1 25 hm5C_associated_SNPs_123473 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50156200-50156220
64251 chr4 31144141 31144141 1 + T C rs377149092 31144139 + 31144119 31144159 41 CCCTGACTGGGAAGTGCACTCGTGAGTGTGATGAGTATGGC CCCTGACTGGGAAGTGCACTCGCGAGTGTGATGAGTATGGC < 41bp 0.629981692113689 0.842295854235043 0.47139713 0.76080173 prediction 0.424628324242708 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:31144139 chr4:31144141 synonymous SNV . 0 23 hm5C_associated_SNPs_123475 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:31144113-31144143
64251 chr1 24120731 24120731 1 + C G UCS 24120727 + 24120707 24120747 41 CCTCCAGGGCGGGGCCCTGTCCCTCTACACGGCCCTCACCT CCTCCAGGGCGGGGCCCTGTCCCTGTACACGGCCCTCACCT < 41bp 0.419595327295952 0.712311761193039 0.041405648 0.07130632 prediction 0.424623522386078 Functional Gain - LYPLA2 ENSG00000011009 CDS Human protein_coding chr1:24120727 chr1:24120731 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_123477 0 0 5 BUD13 POSTAR2 ENCODE chr1:24120665-24120748
64251 chr3 179341806 179341806 1 + C T SKCM 179341805 + 179341785 179341825 41 AGGAACTTATTGATCATTCTCCGAAAGCAACTCCTGACAAT AGGAACTTATTGATCATTCTCTGAAAGCAACTCCTGACAAT < 41bp 0.546555099902764 0.758865137619707 0.35278606 0.39903128 prediction 0.424620075433886 Functional Gain - NDUFB5 ENSG00000136521 CDS Human protein_coding chr3:179341805 chr3:179341806 nonsynonymous SNV 0.865 1 22 hm5C_associated_SNPs_123478 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350200 chr3:179341765-179341812
64251 chr19 41727810 41727810 1 + C T rs148074357 41727809 + 41727789 41727829 41 GCCTTACTTCCTGGAGGAGCCCGAAGACAGGACTGTGGCCG GCCTTACTTCCTGGAGGAGCCTGAAGACAGGACTGTGGCCG < 41bp 0.599120578428379 0.811429458548988 0.32731193 0.38920128 prediction 0.424617760241218 Functional Gain - AXL ENSG00000167601 CDS Human protein_coding chr19:41727809 chr19:41727810 synonymous SNV . 0 22 hm5C_associated_SNPs_123479 0 0 1 TARBP2 POSTAR2 GSE49648,GSM1204358 chr19:41727800-41727820
64251 chr3 50214292 50214292 1 + T C COAD 50214290 + 50214270 50214310 41 CTGGACACAGCATCGGCCCTCATCAGTGAGTGCCCCCCAAC CTGGACACAGCATCGGCCCTCACCAGTGAGTGCCCCCCAAC < 41bp 0.432493680527611 0.712300790850694 0.19110596 0.60744774 prediction 0.424601581701388 Functional Gain - SEMA3F ENSG00000001617 CDS Human protein_coding chr3:50214290 chr3:50214292 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_123481 0 0 1 PRPF8 POSTAR2 ENCODE chr3:50214290-50214328
64251 chr16 29706013 29706013 1 + C T SKCM 29706012 + 29705992 29706032 41 GCTGCTGCTGCCGCCCGTCACCCTGGCAGCCCTGGTGGACA GCTGCTGCTGCCGCCCGTCACTCTGGCAGCCCTGGTGGACA < 41bp 0.471230047442615 0.712300033831612 0.052786887 0.066402525 prediction 0.424600067663224 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706012 chr16:29706013 synonymous SNV . 0 22 hm5C_associated_SNPs_123482 0 0 9 DDX24 POSTAR2 ENCODE chr16:29705985-29706048
64251 chr15 59911486 59911486 1 + C T SKCM 59911485 + 59911465 59911505 41 CTGGCTCTGTTCCCAACCACCCCAAGTACGACATCTCAGAC CTGGCTCTGTTCCCAACCACCTCAAGTACGACATCTCAGAC < 41bp 0.627952109702662 0.840251724316154 0.08617565 0.055867106 prediction 0.424599229226984 Functional Gain - GCNT3 ENSG00000140297 CDS Human protein_coding chr15:59911485 chr15:59911486 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_123483 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr15:59911460-59911487
64251 chr20 56140420 56140420 1 + C A LUAD 56140416 + 56140396 56140436 41 TGTTTAACAGGCAAAATCATCATGCATGACCCCTTTGCCAT TGTTTAACAGGCAAAATCATCATGAATGACCCCTTTGCCAT < 41bp 0.31016559229628 0.712293542960429 0.39296472 0.3028 prediction 0.424587085920858 Functional Gain - PCK1 ENSG00000124253 CDS Human protein_coding chr20:56140416 chr20:56140420 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_123485 0 0 4 BUD13 POSTAR2 ENCODE chr20:56140410-56140459
64251 chr20 2635511 2635511 1 + C A UCEC 2635510 + 2635490 2635530 41 AAAGTTAAGTTTAATGTGAACCGGGTGGACAATATGATCAT AAAGTTAAGTTTAATGTGAACAGGGTGGACAATATGATCAT < 41bp 0.622297345923978 0.83458848515992 0.44317964 0.77775073 prediction 0.424582278471883 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635510 chr20:2635511 synonymous SNV . 0 22 hm5C_associated_SNPs_123487 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:2635395-2635523
64251 chr14 23567761 23567761 1 + A G rs1059379 23567758 + 23567738 23567778 41 TGTAGTGTAATTGTGTGATACGCAAACCATTAGTTTTCCCA TGTAGTGTAATTGTGTGATACGCGAACCATTAGTTTTCCCA < 41bp 0.54097577797674 0.753251565511138 0.07299188 0.11624533 prediction 0.424551575068795 Functional Gain - C14orf119 ENSG00000179933 UTR3 Human protein_coding chr14:23567758 chr14:23567761 . . 0 24 hm5C_associated_SNPs_123491 0 0 5 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:23567716-23567767
64251 chr3 49005985 49005985 1 + A G UCEC 49005982 + 49005962 49006002 41 AACAGGAGTCTCTTGCATGGCTCAGGACTGTCCACTCCGTA AACAGGAGTCTCTTGCATGGCTCGGGACTGTCCACTCCGTA < 41bp 0.58243261798461 0.794706472630313 0.04787016 0.051057577 prediction 0.424547709291405 Functional Gain - ARIH2 ENSG00000177479 CDS Human protein_coding chr3:49005982 chr3:49005985 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_123492 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:49005954-49006027
64251 chr9 131455236 131455236 1 + C A LIHC 131455235 + 131455215 131455255 41 TGATCCATCTTCGAAGTCCACCGAAATCAAATGGAAATCTG TGATCCATCTTCGAAGTCCACAGAAATCAAATGGAAATCTG < 41bp 0.445197231576867 0.712270067477332 0.09908986 0.27562845 prediction 0.424540134954664 Functional Gain - SET ENSG00000119335 CDS Human protein_coding chr9:131455235 chr9:131455236 synonymous SNV . 0 22 hm5C_associated_SNPs_123493 0 0 2 GRWD1 POSTAR2 ENCODE chr9:131455221-131455241
64251 chr12 110355431 110355431 1 + C G rs117176903 110355430 + 110355410 110355450 41 ATGAGTCTCAGAACCACAGACCGGCCAGAAATCTCTCCCAC ATGAGTCTCAGAACCACAGACGGGCCAGAAATCTCTCCCAC < 41bp 0.423563447917866 0.71226533532139 0.100040376 0.38158482 prediction 0.424530670642781 Functional Gain - TCHP ENSG00000139437 UTR3 Human protein_coding chr12:110355430 chr12:110355431 . . 0 22 hm5C_associated_SNPs_123499 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:110355389-110355454
64251 chr21 37706008 37706008 1 + A G UCEC 37706005 + 37705985 37706025 41 CTGGCCATTCAGTGCAGTTGCTGAATTAATAGGTATGTAGT CTGGCCATTCAGTGCAGTTGCTGGATTAATAGGTATGTAGT < 41bp 0.556429994007356 0.76867757940365 0.056988418 0.25230163 prediction 0.424495170792588 Functional Gain - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37706005 chr21:37706008 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_123504 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:37705999-37706035
64251 chr9 127969980 127969980 1 + A G UCEC 127969977 + 127969957 127969997 41 AAATCCAAACAGAAGCTTCTCAGACGTGCACACCATGGATC AAATCCAAACAGAAGCTTCTCAGGCGTGCACACCATGGATC < 41bp 0.460875313418221 0.712238191918561 0.8735475 0.90803665 prediction 0.424476383837121 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127969977 chr9:127969980 nonsynonymous SNV 0.879 4 24 hm5C_associated_SNPs_123508 0 0 5 GRWD1 POSTAR2 ENCODE chr9:127969941-127970007
64251 chr2 28117448 28117448 1 + C T PRAD 28117447 + 28117427 28117467 41 TCCCCAGAAGTGGCCTTGAACCGAATATCTCCAATGCTCTC TCCCCAGAAGTGGCCTTGAACTGAATATCTCCAATGCTCTC < 41bp 0.472117756176696 0.712236202634701 0.009829104 0.0036029518 prediction 0.424472405269401 Functional Gain - BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28117447 chr2:28117448 stopgain 0.994 1 22 hm5C_associated_SNPs_123509 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr2:28117421-28117449
64251 chr15 90969381 90969381 1 + C A LUSC 90969380 + 90969360 90969400 41 AGGGGAAGATCTGCCTCCCACCACAGAACTGGAGGAGGGGC AGGGGAAGATCTGCCTCCCACAACAGAACTGGAGGAGGGGC < 41bp 0.452561969347688 0.712235219996128 0.13178775 0.15603694 prediction 0.424470439992257 Functional Gain - IQGAP1 ENSG00000140575 CDS Human protein_coding chr15:90969380 chr15:90969381 synonymous SNV . 0 22 hm5C_associated_SNPs_123510 0 0 14 DDX3X POSTAR2 GSE70804,GSM1819213 chr15:90969380-90969400
64251 chr19 15760901 15760901 1 + C T UCEC 15760900 + 15760880 15760920 41 GCCGTCATCCAGGAGCGGCGCCGCACCCTCCCTAGCCAGGG GCCGTCATCCAGGAGCGGCGCTGCACCCTCCCTAGCCAGGG < 41bp 0.613346467569305 0.82557945952707 0.1371631 0.17779306 prediction 0.42446598391553 Functional Gain - CYP4F3 ENSG00000186529 CDS Human protein_coding chr19:15760900 chr19:15760901 nonsynonymous SNV 0.039 1 22 hm5C_associated_SNPs_123511 0 0 1 GRWD1 POSTAR2 ENCODE chr19:15760864-15760930
64251 chr16 89293725 89293725 1 + A G OV 89293722 + 89293702 89293742 41 CCCTGTGAATGTAAAGAATGCGGAAAAGCCTTCACTGGACT CCCTGTGAATGTAAAGAATGCGGGAAAGCCTTCACTGGACT < 41bp 0.561995940549405 0.774228564673044 0.24794114 0.5231772 prediction 0.424465248247278 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89293722 chr16:89293725 synonymous SNV . 0 24 hm5C_associated_SNPs_123512 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:89293714-89293725
64251 chr14 101195353 101195353 1 + C T UCEC 101195352 + 101195332 101195372 41 TTCACGGACTCTGTGGAGAACCCGGGCAGTGCATTTGCACC TTCACGGACTCTGTGGAGAACTCGGGCAGTGCATTTGCACC < 41bp 0.610245208382456 0.822476206620738 0.75938684 0.8339316 prediction 0.424461996476563 Functional Gain - DLK1 ENSG00000185559 CDS Human protein_coding chr14:101195352 chr14:101195353 nonsynonymous SNV 0.709 4 22 hm5C_associated_SNPs_123514 0 0 17 DDX3X POSTAR2 ENCODE chr14:101195349-101195397
64251 chr2 85824251 85824251 1 + T C rs6643 85824248 + 85824228 85824268 41 CAAATTCCTGTCCCTTGTGCCGCTATGAGCTGCCCACTGAT CAAATTCCTGTCCCTTGTGCCGCCATGAGCTGCCCACTGAT < 41bp 0.550141640097475 0.76234576472586 0.20423707 0.61352485 prediction 0.424408249256769 Functional Gain - RNF181 ENSG00000168894 CDS Human protein_coding chr2:85824248 chr2:85824251 nonsynonymous SNV 0.999 0 24 hm5C_associated_SNPs_123522 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr2:85824224-85824254
64251 chr10 74034063 74034063 1 + C T UCEC 74034062 + 74034042 74034082 41 CTCCCACCCCAGATCGGCCGCCGCGCTCAGCCTGGGGGTCG CTCCCACCCCAGATCGGCCGCTGCGCTCAGCCTGGGGGTCG < 41bp 0.570252450433582 0.782455813762503 0.41564885 0.2789396 prediction 0.424406726657843 Functional Gain - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034062 chr10:74034063 nonsynonymous SNV 0.991 1 22 hm5C_associated_SNPs_123524 0 0 6 DDX3X POSTAR2 ENCODE chr10:74034062-74034150
64251 chr9 99252379 99252379 1 + C T rs376355262 99252378 + 99252358 99252398 41 ACACCTGTGGGGAGACTTTTCCAGCTGGGCCAAGGGAGTCA ACACCTGTGGGGAGACTTTTCTAGCTGGGCCAAGGGAGTCA < 41bp 0.528310612046772 0.74051143242203 0.7613244 0.41043824 prediction 0.424401640750516 Functional Gain - HABP4 ENSG00000130956 UTR3 Human protein_coding chr9:99252378 chr9:99252379 . . 0 22 hm5C_associated_SNPs_123525 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:99252376-99252397
64251 chr5 70797462 70797462 1 + A G rs199719765 70797459 + 70797439 70797479 41 GACTACAGAGAGAGAGAATCCAGAAGCTGAAACTGTATCTG GACTACAGAGAGAGAGAATCCAGGAGCTGAAACTGTATCTG < 41bp 0.491683561384934 0.712197119254381 0.82147396 0.8716235 prediction 0.424394238508763 Functional Gain - BDP1 ENSG00000145734 CDS Human protein_coding chr5:70797459 chr5:70797462 nonsynonymous SNV 0.148 0 24 hm5C_associated_SNPs_123526 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:70797407-70797474
64251 chr5 140596009 140596009 1 + C A LUSC 140596008 + 140595988 140596028 41 AAGTTCCTGAAGCCGATTATCCCCAACTTCCCTCCCCAGTG AAGTTCCTGAAGCCGATTATCACCAACTTCCCTCCCCAGTG < 41bp 0.597238085063818 0.809433129845745 0.09321883 0.083330125 prediction 0.424390089563853 Functional Gain - PCDHB13 ENSG00000187372 CDS Human protein_coding chr5:140596008 chr5:140596009 nonsynonymous SNV 0.008 1 22 hm5C_associated_SNPs_123528 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:140595990-140596025
64251 chr6 52343899 52343899 1 + T C rs1266787 52343897 + 52343877 52343917 41 TCTTACTTTCTAGCTACCGACATGATCAGTATCTTTGAGCC TCTTACTTTCTAGCTACCGACACGATCAGTATCTTTGAGCC < 41bp 0.402020184970104 0.712184840141696 0.08268413 0.026202977 prediction 0.424369680283393 Functional Gain - EFHC1 ENSG00000096093 CDS Human protein_coding chr6:52343897 chr6:52343899 nonsynonymous SNV 0.979 0 23 hm5C_associated_SNPs_123533 4 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:52343864-52343924
64251 chr3 157839954 157839954 1 + C T COAD 157839953 + 157839933 157839973 41 AGCAAGAGAAAAAAGAAACACCGTAGACGGTCCTCCTCGAG AGCAAGAGAAAAAAGAAACACTGTAGACGGTCCTCCTCGAG < 41bp 0.477011374587156 0.712182370898428 0.13712919 0.22174373 prediction 0.424364741796856 Functional Gain - RSRC1 ENSG00000174891 CDS Human protein_coding chr3:157839953 chr3:157839954 nonsynonymous SNV 0.802 3 22 hm5C_associated_SNPs_123535 0 0 1 UCHL5 POSTAR2 ENCODE chr3:157839891-157840021
64251 chr16 53301326 53301326 1 + C T UCEC 53301325 + 53301305 53301345 41 GGAGATGAAAAGCCCAAACTCCGGAGACCCTGTGACCGTTC GGAGATGAAAAGCCCAAACTCTGGAGACCCTGTGACCGTTC < 41bp 0.584652285927664 0.796832905418292 0.8049867 0.42743933 prediction 0.424361238981255 Functional Gain - CHD9 ENSG00000177200 CDS Human protein_coding chr16:53301325 chr16:53301326 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123536 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:53301321-53301346
64251 chr8 28574958 28574958 1 + C T HNSC 28574957 + 28574937 28574977 41 CCCTGGAAGTCGGTGCCGTCCCGGTGGTGCTGGGGGAGCAG CCCTGGAAGTCGGTGCCGTCCTGGTGGTGCTGGGGGAGCAG < 41bp 0.473195886261779 0.712168585633187 0.37447518 0.42210993 prediction 0.424337171266374 Functional Gain - EXTL3 ENSG00000012232 CDS Human protein_coding chr8:28574957 chr8:28574958 nonsynonymous SNV 0.185 5 22 hm5C_associated_SNPs_123539 1 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr8:28574933-28574975
64251 chr19 7536769 7536769 1 + C A rs7258479 7536765 + 7536745 7536785 41 TCCCCAGGCTCCTGGCCCCTCCGACGACCTCAACTCTGCCC TCCCCAGGCTCCTGGCCCCTCCGAAGACCTCAACTCTGCCC < 41bp 0.351099922345178 0.712166129243015 0.17800942 0.2734174 prediction 0.42433225848603 Functional Gain - ARHGEF18 ENSG00000104880 UTR3 Human protein_coding chr19:7536765 chr19:7536769 . . 0 25 hm5C_associated_SNPs_123541 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:7536752-7536828
64251 chr11 57578943 57578943 1 + C T rs144978541 57578942 + 57578922 57578962 41 AGTACTCTCCCTCTCATTGACCGGAACCAAAAATCAGGTGC AGTACTCTCCCTCTCATTGACTGGAACCAAAAATCAGGTGC < 41bp 0.60730578234041 0.819468253448658 0.26254112 0.2507996 prediction 0.424324942216495 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57578942 chr11:57578943 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123543 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350201 chr11:57578911-57578949
64251 chr14 64988779 64988779 1 + C T PAAD 64988778 + 64988758 64988798 41 CTTTACAATTAGGTAATTTTCCTGAGCCACTATTTGATGTA CTTTACAATTAGGTAATTTTCTTGAGCCACTATTTGATGTA < 41bp 0.579689616212919 0.791850822344819 0.31311756 0.120422006 prediction 0.4243224122638 Functional Gain - ZBTB1 ENSG00000126804 CDS Human protein_coding chr14:64988778 chr14:64988779 nonsynonymous SNV 0.932 1 22 hm5C_associated_SNPs_123544 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:64988760-64988800
64251 chr1 227174210 227174210 1 + T C rs3738725 227174207 + 227174187 227174227 41 ATCCTGGGGGAGGCCTTCGCCTCTGATGAGCCTTTTGATTT ATCCTGGGGGAGGCCTTCGCCTCCGATGAGCCTTTTGATTT < 41bp 0.523522308207784 0.735681318492074 0.06862205 0.044813573 prediction 0.424318020568578 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227174207 chr1:227174210 synonymous SNV . 0 24 hm5C_associated_SNPs_123546 3 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:227174177-227174215
64251 chr11 120355957 120355957 1 + A G rs115813755 120355954 + 120355934 120355974 41 CCAGAGTGGGACTAGTTCTTCACAGTGTGGCAGCTGCACTA CCAGAGTGGGACTAGTTCTTCACGGTGTGGCAGCTGCACTA < 41bp 0.564127661790824 0.776277835560172 0.36687684 0.71216035 prediction 0.424300347538698 Functional Gain - ARHGEF12 ENSG00000196914 UTR3 Human protein_coding chr11:120355954 chr11:120355957 . . 0 24 hm5C_associated_SNPs_123548 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:120355937-120355973
64251 chr4 74279238 74279238 1 + C T LUSC 74279237 + 74279217 74279257 41 GGAAAAATCCCACTGCATTGCCGAAGTGGAAAATGATGAGA GGAAAAATCCCACTGCATTGCTGAAGTGGAAAATGATGAGA < 41bp 0.597210583167894 0.809349189509889 0.08872861 0.12442556 prediction 0.42427721268399 Functional Gain - ALB ENSG00000163631 CDS Human protein_coding chr4:74279237 chr4:74279238 synonymous SNV . 0 22 hm5C_associated_SNPs_123553 0 0 5 DHX30 POSTAR2 ENCODE chr4:74279231-74279262
64251 chr8 110566962 110566962 1 + A G LIHC 110566959 + 110566939 110566979 41 GTTGATCAATTAAATTTAGACAGATGTTGAAGAGTGGACTT GTTGATCAATTAAATTTAGACAGGTGTTGAAGAGTGGACTT < 41bp 0.556298245423516 0.768431192401147 0.26094738 0.38791603 prediction 0.424265893955262 Functional Gain - EBAG9 ENSG00000147654 CDS Human protein_coding chr8:110566959 chr8:110566962 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_123556 0 0 2 GRWD1 POSTAR2 ENCODE chr8:110566957-110567029
64251 chr4 15009113 15009113 1 + A G STAD 15009110 + 15009090 15009130 41 TGGTAATGTCATAGCACCACCGAAATTTACTCGCTCAACTC TGGTAATGTCATAGCACCACCGAGATTTACTCGCTCAACTC < 41bp 0.477528562875276 0.712131243714479 0.103352666 0.33629382 prediction 0.424262487428958 Functional Gain - CPEB2 ENSG00000137449 CDS Human protein_coding chr4:15009110 chr4:15009113 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_123558 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr4:15009111-15009151
64251 chr13 53035751 53035751 1 + C T HNSC 53035750 + 53035730 53035770 41 AGAAGTCATCACAGTAATACCCGGGACACTGTGAAACAAGG AGAAGTCATCACAGTAATACCTGGGACACTGTGAAACAAGG < 41bp 0.571108662674904 0.783238386572916 0.27619547 0.2071726 prediction 0.424259447796024 Functional Gain - CKAP2 ENSG00000136108 CDS Human protein_coding chr13:53035750 chr13:53035751 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_123559 0 0 12 CPSF6 POSTAR2 GSE37401,GSM917665 chr13:53035706-53035794
64251 chr19 11141441 11141441 1 + A G GBM 11141438 + 11141418 11141458 41 CGGAGGACCGGGGCATGCTGCTGAAAACCTTCAACGAGCCC CGGAGGACCGGGGCATGCTGCTGGAAACCTTCAACGAGCCC < 41bp 0.481643039707178 0.71212099009892 0.14395046 0.09670922 prediction 0.424241980197839 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141438 chr19:11141441 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_123561 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:11141425-11141445
64251 chr1 162535877 162535877 1 + A G LUAD 162535874 + 162535854 162535894 41 GCATTATGAACATTAATGACCTCAAACTCACGTTGTCCAAA GCATTATGAACATTAATGACCTCGAACTCACGTTGTCCAAA < 41bp 0.56999005289604 0.78210585067982 0.025919467 0.08580354 prediction 0.424231595567559 Functional Gain - UAP1 ENSG00000117143 CDS Human protein_coding chr1:162535874 chr1:162535877 nonsynonymous SNV 0.982 0 24 hm5C_associated_SNPs_123563 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:162535860-162535880
64251 chr18 21096361 21096361 1 + C T STAD 21096360 + 21096340 21096380 41 GTCAACTAAACCCAGCCTTTCCGAAAGAGACATCGCAATGG GTCAACTAAACCCAGCCTTTCTGAAAGAGACATCGCAATGG < 41bp 0.446678099735439 0.712115408457994 0.043598026 0.06399384 prediction 0.424230816915987 Functional Gain - C18orf8 ENSG00000141452 CDS Human protein_coding chr18:21096360 chr18:21096361 synonymous SNV . 0 22 hm5C_associated_SNPs_123564 0 0 2 YBX3 POSTAR2 ENCODE chr18:21096339-21096383
64251 chr19 13888898 13888898 1 + A G COAD 13888895 + 13888875 13888915 41 GTCGGAATCCGGAAGAAGATCGAACATGACGTGGTGATGAA GTCGGAATCCGGAAGAAGATCGAGCATGACGTGGTGATGAA < 41bp 0.589644019527478 0.801753364637197 0.26210564 0.79794127 prediction 0.424218690219438 Functional Gain - C19orf53 ENSG00000104979 CDS Human protein_coding chr19:13888895 chr19:13888898 synonymous SNV . 0 24 hm5C_associated_SNPs_123568 0 0 20 HNRNPC POSTAR2 GSE56010,GSM1350198 chr19:13888863-13888899
64251 chr16 24788401 24788401 1 + C A rs575176088 24788400 + 24788380 24788420 41 AGCAGCAGCAACAGCAGCAGCCGCAGCAGCAGCAGCCACAG AGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCCACAG < 41bp 0.599531641563964 0.811631693014 0.0595555 0.13749081 prediction 0.424200102900071 Functional Gain - TNRC6A ENSG00000090905 CDS Human protein_coding chr16:24788400 chr16:24788401 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_123571 0 0 1 SF3B1 POSTAR2 ENCODE chr16:24788384-24788415
64251 chr22 45128232 45128232 1 + T C rs8141631 45128230 + 45128210 45128250 41 CGCTGGCCCGGGCCCATGCCCGTGTGCCCCCTGCCATCGTG CGCTGGCCCGGGCCCATGCCCGCGTGCCCCCTGCCATCGTG < 41bp 0.61530117674839 0.82740073111081 0.29144093 0.5241666 prediction 0.424199108724841 Functional Gain - PRR5 ENSG00000186654;ENSG00000241484;ENSG00000248405 CDS Human other chr22:45128230 chr22:45128232 synonymous SNV . 0 23 hm5C_associated_SNPs_123572 0 0 1 SLTM POSTAR2 ENCODE chr22:45128202-45128242
64251 chr10 7788613 7788613 1 + C A STAD 7788612 + 7788592 7788632 41 ATGAGAGACCAGGAAAGGACCCTGAGAAGCCAGAGGCCAGC ATGAGAGACCAGGAAAGGACCATGAGAAGCCAGAGGCCAGC < 41bp 0.441693985276345 0.712095933342771 0.04217571 0.11812374 prediction 0.424191866685542 Functional Gain - ITIH2 ENSG00000151655 CDS Human protein_coding chr10:7788612 chr10:7788613 nonsynonymous SNV 0.724 4 22 hm5C_associated_SNPs_123575 0 0 4 GRWD1 POSTAR2 ENCODE chr10:7788584-7788633
64251 chr2 70315448 70315448 1 + A G rs12319 70315445 + 70315425 70315465 41 CAGCCCATGCCGGCCAGCTCCCCAGTCATCTGCGCGGGCGG CAGCCCATGCCGGCCAGCTCCCCGGTCATCTGCGCGGGCGG < 41bp 0.607978970422491 0.820069205958476 0.14246649 0.32069814 prediction 0.424180471071969 Functional Gain - PCBP1 ENSG00000169564 CDS Human protein_coding chr2:70315445 chr2:70315448 synonymous SNV . 0 24 hm5C_associated_SNPs_123577 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:70315405-70315451
64251 chr19 4442934 4442934 1 + C T CHOL 4442933 + 4442913 4442953 41 GCCCTGCAGAGGTCCAAGCCCCGTGTGGAGCCGCTTCCGGA GCCCTGCAGAGGTCCAAGCCCTGTGTGGAGCCGCTTCCGGA < 41bp 0.487273811948374 0.712086216418231 0.37283343 0.38067287 prediction 0.424172432836462 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4442933 chr19:4442934 nonsynonymous SNV 0.036 2 22 hm5C_associated_SNPs_123580 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:4442925-4442953
64251 chr9 137005029 137005029 1 + C T UCEC 137005028 + 137005008 137005048 41 GGAGGAGAAGAAGCCCGAGACCGAGGCCGCCAGAGCACAGC GGAGGAGAAGAAGCCCGAGACTGAGGCCGCCAGAGCACAGC < 41bp 0.593743024634767 0.805826811622647 0.39910513 0.28448668 prediction 0.42416757397576 Functional Gain - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137005028 chr9:137005029 synonymous SNV . 0 22 hm5C_associated_SNPs_123583 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704214 chr9:137005012-137005033
64251 chr3 9934787 9934787 1 + C T SKCM 9934786 + 9934766 9934806 41 TCTTGGGCCTTCTCTCCTTTCCCCGCAACAACATTAGCTAC TCTTGGGCCTTCTCTCCTTTCTCCGCAACAACATTAGCTAC < 41bp 0.618930678755282 0.831007523629163 0.1792152 0.21682996 prediction 0.424153689747763 Functional Gain - JAGN1 ENSG00000171135 CDS Human protein_coding chr3:9934786 chr3:9934787 nonsynonymous SNV 0.919 4 22 hm5C_associated_SNPs_123588 0 0 18 PTBP1 POSTAR2 GSE57278,GSM1378377 chr3:9934740-9934800
64251 chr20 61450599 61450599 1 + C G rs143307835 61450598 + 61450578 61450618 41 CAAAGGGGGCCCCAGGAAAGCCGGGGAAACCAGGAGAGGCT CAAAGGGGGCCCCAGGAAAGCGGGGGAAACCAGGAGAGGCT < 41bp 0.678714515291529 0.890785846536152 0.90951794 0.91861975 prediction 0.424142662489245 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61450598 chr20:61450599 nonsynonymous SNV 0.971 2 22 hm5C_associated_SNPs_123591 0 0 5 DDX3X POSTAR2 ENCODE chr20:61450574-61450645
64251 chr10 12136106 12136106 1 + T C UCEC 12136103 + 12136083 12136123 41 GGCTGTGCCATCATCCATGTCAATGGAGACAGCCCAGAGGA GGCTGTGCCATCATCCATGTCAACGGAGACAGCCCAGAGGA < 41bp 0.518385992367812 0.730450470156881 0.2008054 0.2079564 prediction 0.424128955578138 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12136103 chr10:12136106 synonymous SNV . 0 24 hm5C_associated_SNPs_123596 0 0 2 DDX24 POSTAR2 ENCODE chr10:12136069-12136137
64251 chr2 24964987 24964987 1 + T C COAD 24964985 + 24964965 24965005 41 AGCAGAGGCATGACAGGAAACATAGGAGGACAGTTTGGCAC AGCAGAGGCATGACAGGAAACACAGGAGGACAGTTTGGCAC < 41bp 0.434509526495716 0.712064378631256 0.47008857 0.25448895 prediction 0.424128757262512 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964985 chr2:24964987 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_123597 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:24964975-24965011
64251 chr12 65004387 65004387 1 + C G rs3741748 65004386 + 65004366 65004406 41 CCGCCTGCGCCCCGGGGAGGCCGCCCGCGCGCGACGGGACC CCGCCTGCGCCCCGGGGAGGCGGCCCGCGCGCGACGGGACC < 41bp 0.588484148831077 0.80053432686112 0.31296855 0.64406085 prediction 0.424100356060086 Functional Gain - RASSF3 ENSG00000153179 UTR5 Human protein_coding chr12:65004386 chr12:65004387 . . 0 22 hm5C_associated_SNPs_123603 0 0 5 DDX3X POSTAR2 ENCODE chr12:65004350-65004411
64251 chr2 198570777 198570777 1 + C T UCEC 198570776 + 198570756 198570796 41 AAACTACATTTTCAGGCTTTCCCAGTTCCGGAAGCCACTCC AAACTACATTTTCAGGCTTTCTCAGTTCCGGAAGCCACTCC < 41bp 0.470451099317231 0.712040284751063 0.37844568 0.27152267 prediction 0.424080569502126 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570776 chr2:198570777 synonymous SNV . 0 22 hm5C_associated_SNPs_123606 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:198570760-198570780
64251 chr10 124189150 124189150 1 + C T SKCM 124189149 + 124189129 124189169 41 CCTTTTTGCAGGAGCATCCCCCCGGTCCTTCAGAATCCAAA CCTTTTTGCAGGAGCATCCCCTCGGTCCTTCAGAATCCAAA < 41bp 0.582641967180271 0.794670376257376 0.28488058 0.2336477 prediction 0.42405681815421 Functional Gain - PLEKHA1 ENSG00000107679 CDS Human protein_coding chr10:124189149 chr10:124189150 nonsynonymous SNV 0.164 0 22 hm5C_associated_SNPs_123614 0 0 9 BUD13 POSTAR2 ENCODE chr10:124189094-124189211
64251 chr19 17309096 17309096 1 + C T rs193007687 17309095 + 17309075 17309115 41 TCCCAGACGCAGGGCTGTCCCCGGGCTCTCAGGTCGACTCT TCCCAGACGCAGGGCTGTCCCTGGGCTCTCAGGTCGACTCT < 41bp 0.587716905620307 0.799743896990218 0.91723037 0.39952338 prediction 0.424053982739821 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17309095 chr19:17309096 nonsynonymous SNV 0.216 3 22 hm5C_associated_SNPs_123615 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:17309080-17309100
64251 chr11 63743765 63743765 1 + C G KIRP 63743761 + 63743741 63743781 41 GCCAGCGGGCTGGATCCTGTCACACCTGGAGACCTACAGGA GCCAGCGGGCTGGATCCTGTCACAGCTGGAGACCTACAGGA < 41bp 0.648820474208491 0.860841222771472 0.25327498 0.3675502 prediction 0.424041497125962 Functional Gain - COX8A ENSG00000176340 CDS Human protein_coding chr11:63743761 chr11:63743765 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_123619 0 0 40 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63743697-63744008
64251 chr1 207263668 207263668 1 + A G UCEC 207263665 + 207263645 207263685 41 TCTTCCAGCAGAGCACTGTCCAGAGCTTCCTCCAGTGGACA TCTTCCAGCAGAGCACTGTCCAGGGCTTCCTCCAGTGGACA < 41bp 0.584008171110824 0.79601925401146 0.6366769 0.9138642 prediction 0.424022165801272 Functional Gain - C4BPB ENSG00000123843 CDS Human protein_coding chr1:207263665 chr1:207263668 nonsynonymous SNV 0.523 1 24 hm5C_associated_SNPs_123622 0 0 3 PPIG POSTAR2 ENCODE chr1:207263650-207263678
64251 chr17 16335314 16335314 1 + C A LIHC 16335313 + 16335293 16335333 41 GAGCCAGGAGGCTTGGCGCCCCGAAGCTCCTACAGGCCCCA GAGCCAGGAGGCTTGGCGCCCAGAAGCTCCTACAGGCCCCA < 41bp 0.624158841335647 0.83616374143679 0.5201863 0.8118416 prediction 0.424009800202287 Functional Gain - TRPV2 ENSG00000187688 CDS Human protein_coding chr17:16335313 chr17:16335314 synonymous SNV . 0 22 hm5C_associated_SNPs_123626 0 0 2 SND1 POSTAR2 ENCODE chr17:16335278-16335321
64251 chr1 100606022 100606022 1 + T G rs532713466 100606020 + 100606000 100606040 41 ATCCAGCATTACACGATGCACTTAATGACCCTAAAAATGGC ATCCAGCATTACACGATGCACTGAATGACCCTAAAAATGGC < 41bp 0.387440619951638 0.71200449246834 0.05362168 0.028886735 prediction 0.424008984936679 Functional Gain - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100606020 chr1:100606022 synonymous SNV . 0 23 hm5C_associated_SNPs_123627 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:100605992-100606030
64251 chr14 24113663 24113663 1 + A G BRCA 24113660 + 24113640 24113680 41 GCAAGACAGCGCTGCTGGGTCTCACTAGAACACTGGCATTG GCAAGACAGCGCTGCTGGGTCTCGCTAGAACACTGGCATTG < 41bp 0.462177251741736 0.712003940571484 0.021115422 0.052726835 prediction 0.424007881142968 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113660 chr14:24113663 nonsynonymous SNV 0.053 1 24 hm5C_associated_SNPs_123628 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:24113633-24113667
64251 chr2 20648406 20648406 1 + C G rs78953415 20648402 + 20648382 20648422 41 CCCAGGCTGGGCCAGACTCCCGCCCAAGCATGAACAGGACT CCCAGGCTGGGCCAGACTCCCGCCGAAGCATGAACAGGACT < 41bp 0.633298169435661 0.845298981090717 0.12960818 0.26055646 prediction 0.424001623310113 Functional Gain - RHOB ENSG00000143878 UTR3 Human protein_coding chr2:20648402 chr2:20648406 . . 0 25 hm5C_associated_SNPs_123634 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:20648304-20648409
64251 chr10 127429604 127429604 1 + C G rs17153494 127429603 + 127429583 127429623 41 CCTCTGCACCAATATGCTTTCCGAAGTGCTGTTGTTTCTCT CCTCTGCACCAATATGCTTTCGGAAGTGCTGTTGTTTCTCT < 41bp 0.387022203716664 0.711982000961004 0.2604441 0.82302856 prediction 0.423964001922009 Functional Gain - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127429603 chr10:127429604 synonymous SNV . 0 22 hm5C_associated_SNPs_123644 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:127429577-127429615
64251 chr16 840769 840769 1 + A G rs3765266 840766 + 840746 840786 41 ACAGCCAATCCACTGGGCCTCGGAGACGGAGTGGGCTCTGG ACAGCCAATCCACTGGGCCTCGGGGACGGAGTGGGCTCTGG < 41bp 0.521650025356306 0.733627337404624 0.89935833 0.9076303 prediction 0.423954624096636 Functional Gain - CHTF18 ENSG00000127586 intronic Human protein_coding chr16:840766 chr16:840769 . . 0 24 hm5C_associated_SNPs_123647 0 0 2 RBM15 POSTAR2 ENCODE chr16:840738-840796
64251 chr22 20378905 20378905 1 + C T rs2930761 20378904 + 20378884 20378924 41 AGCTCTTCTACGGAGGGGAACCGCAGAGCCAGAAGAGCACG AGCTCTTCTACGGAGGGGAACTGCAGAGCCAGAAGAGCACG < 41bp 0.598407983399114 0.810380036379128 0.38442263 0.65187 prediction 0.423944105960029 Functional Gain - TMEM191B ENSG00000206176 ncRNA_exonic Human other chr22:20378904 chr22:20378905 . 0.016 0 22 hm5C_associated_SNPs_123650 0 0 1 BUD13 POSTAR2 ENCODE chr22:20378881-20378939
64251 chr5 53813966 53813966 1 + C A rs374095539 53813965 + 53813945 53813985 41 TATGTGCAGGTGATCCGCGCCCCCGAGCCTGGCCCGGCGGG TATGTGCAGGTGATCCGCGCCACCGAGCCTGGCCCGGCGGG < 41bp 0.579152983535968 0.791110665766614 0.29375994 0.52925 prediction 0.423915364461291 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53813965 chr5:53813966 nonsynonymous SNV 0.589 0 22 hm5C_associated_SNPs_123657 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:53813956-53813984
64251 chr20 61453160 61453160 1 + C A LUAD 61453159 + 61453139 61453179 41 GGGATCGGCCTCCGCGGCCCCCCGGTGAGTGGCTGTCCCAG GGGATCGGCCTCCGCGGCCCCACGGTGAGTGGCTGTCCCAG < 41bp 0.61527244616839 0.827228777126998 0.35355788 0.6482753 prediction 0.423912661917217 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61453159 chr20:61453160 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_123658 0 0 7 BUD13 POSTAR2 ENCODE chr20:61453145-61453160
64251 chr21 46644593 46644593 1 + C A rs556874886 46644592 + 46644572 46644612 41 TGGGTTCCGGGAGCCCTGGGCCGGGGCAGGGGGCGGCTGTA TGGGTTCCGGGAGCCCTGGGCAGGGGCAGGGGGCGGCTGTA < 41bp 0.55814996491639 0.770103415536943 0.9460853 0.94926214 prediction 0.423906901241105 Functional Gain - ADARB1 ENSG00000197381 UTR3 Human protein_coding chr21:46644592 chr21:46644593 . . 0 22 hm5C_associated_SNPs_123659 0 0 14 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr21:46644588-46644609
64251 chr19 19646389 19646389 1 + C T HNSC 19646388 + 19646368 19646408 41 GTGGTGGATGCCGTACTGGGCCCCGGCGTGGAGCCGGGCGA GTGGTGGATGCCGTACTGGGCTCCGGCGTGGAGCCGGGCGA < 41bp 0.595190856016017 0.807131663725465 0.6418558 0.7759277 prediction 0.423881615418896 Functional Gain - YJEFN3 ENSG00000250067;ENSG00000258674 CDS Human other chr19:19646388 chr19:19646389 nonsynonymous SNV 0.102 1 22 hm5C_associated_SNPs_123661 0 0 4 BUD13 POSTAR2 ENCODE chr19:19646368-19646427
64251 chr19 5137991 5137991 1 + T C UCEC 5137988 + 5137968 5138008 41 CCCAGGTGGATCCACGTGATCTGTGCCATCGCAGTCCCCGA CCCAGGTGGATCCACGTGATCTGCGCCATCGCAGTCCCCGA < 41bp 0.509154972322459 0.721094525801501 0.14345896 0.1177299 prediction 0.423879106958083 Functional Gain - KDM4B ENSG00000127663 CDS Human protein_coding chr19:5137988 chr19:5137991 synonymous SNV . 0 24 hm5C_associated_SNPs_123663 0 0 6 DDX24 POSTAR2 ENCODE chr19:5137982-5138069
64251 chr20 49184935 49184935 1 + T C UCEC 49184933 + 49184913 49184953 41 GCAGGGCCCTTTGCCTAACACATGCGGTCACTTTTGGGAGA GCAGGGCCCTTTGCCTAACACACGCGGTCACTTTTGGGAGA < 41bp 0.426607239112409 0.711937792058079 0.3823028 0.3715278 prediction 0.423875584116159 Functional Gain - PTPN1 ENSG00000196396 CDS Human protein_coding chr20:49184933 chr20:49184935 nonsynonymous SNV 0.523 5 23 hm5C_associated_SNPs_123665 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:49184931-49184967
64251 chr6 13977773 13977773 1 + C T SKCM 13977772 + 13977752 13977792 41 GGAGGTGCAGAGAGAGAGCTCCCCGTCCCTGAGCTCCACTC GGAGGTGCAGAGAGAGAGCTCTCCGTCCCTGAGCTCCACTC < 41bp 0.623354608976464 0.835273940830833 0.11455327 0.208159 prediction 0.423838663708738 Functional Gain - RNF182 ENSG00000180537 CDS Human protein_coding chr6:13977772 chr6:13977773 synonymous SNV . 0 22 hm5C_associated_SNPs_123675 0 0 1 IGF2BP2 POSTAR2 ENCODE chr6:13977736-13977800
64251 chr21 18919449 18919449 1 + C A UCEC 18919448 + 18919428 18919468 41 TTTACGCTTAGTCCCGAAGACCAGGGACCGCTGGACATCGA TTTACGCTTAGTCCCGAAGACAAGGGACCGCTGGACATCGA < 41bp 0.621873605418338 0.833791282874401 0.4235271 0.2914173 prediction 0.423835354912127 Functional Gain - CXADR ENSG00000154639 CDS Human protein_coding chr21:18919448 chr21:18919449 nonsynonymous SNV 0.958 0 22 hm5C_associated_SNPs_123677 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:18919436-18919463
64251 chr10 99416657 99416657 1 + C A UCEC 99416656 + 99416636 99416676 41 GTTTTGAAGCAGAACCTCTTCCTGAGAACACTAACCGGCAA GTTTTGAAGCAGAACCTCTTCATGAGAACACTAACCGGCAA < 41bp 0.626559287015785 0.838466837851295 0.18494052 0.30816036 prediction 0.423815101671021 Functional Gain - PI4K2A ENSG00000155252;ENSG00000249967 CDS Human other chr10:99416656 chr10:99416657 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_123683 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr10:99416640-99416660
64251 chr19 36256066 36256066 1 + C T SKCM 36256065 + 36256045 36256085 41 ACTCCAGCAAGGGCCTTGGCCCCAGGGCACCCGGTAAGGGC ACTCCAGCAAGGGCCTTGGCCTCAGGGCACCCGGTAAGGGC < 41bp 0.454414638805192 0.711906466855584 0.21504518 0.051136672 prediction 0.423812933711169 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36256065 chr19:36256066 nonsynonymous SNV 0.063 0 22 hm5C_associated_SNPs_123684 0 0 1 PPIG POSTAR2 ENCODE chr19:36256023-36256081
64251 chr17 21202211 21202211 1 + C T STAD 21202210 + 21202190 21202230 41 ACCCCCCCGGAACCTGGACTCCCGGACCTTCATCACCATTG ACCCCCCCGGAACCTGGACTCTCGGACCTTCATCACCATTG < 41bp 0.612575815136392 0.824481037336538 0.6835695 0.57539934 prediction 0.423810444400293 Functional Gain - MAP2K3 ENSG00000034152 CDS Human protein_coding chr17:21202210 chr17:21202211 synonymous SNV . 0 22 hm5C_associated_SNPs_123685 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:21202189-21202224
64251 chr15 69682037 69682037 1 + A G COAD 69682034 + 69682014 69682054 41 CATACACGTTCCCGGATGCGCTCATGTGCACCACTTTCCAT CATACACGTTCCCGGATGCGCTCGTGTGCACCACTTTCCAT < 41bp 0.46083600169573 0.711902586373225 0.1113089 0.15173772 prediction 0.42380517274645 Functional Gain - PAQR5 ENSG00000137819 CDS Human protein_coding chr15:69682034 chr15:69682037 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_123687 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:69682021-69682048
64251 chr4 1244416 1244416 1 + A G rs1732115 1244413 + 1244393 1244433 41 TCACTGGACTTTCCTGTCTGCTCAGCATGGACAGGCAGCCC TCACTGGACTTTCCTGTCTGCTCGGCATGGACAGGCAGCCC < 41bp 0.589290809068196 0.801188212424418 0.072267115 0.090141594 prediction 0.423794806712444 Functional Gain - CTBP1-AS2 ENSG00000196810 ncRNA_exonic Human antisense chr4:1244413 chr4:1244416 . . 0 24 hm5C_associated_SNPs_123689 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:1244415-1244416
64251 chr4 1730219 1730219 1 + A G COAD 1730216 + 1730196 1730236 41 GACTGGGAGAGAGGTCCGGCCTCAAGCCTCCCTTGAGGAAA GACTGGGAGAGAGGTCCGGCCTCGAGCCTCCCTTGAGGAAA < 41bp 0.613849963648515 0.825743578731851 0.04149559 0.3642398 prediction 0.423787230166671 Functional Gain - TACC3 ENSG00000013810 CDS Human protein_coding chr4:1730216 chr4:1730219 nonsynonymous SNV 0.005 2 24 hm5C_associated_SNPs_123692 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:1730200-1730237
64251 chr10 99509340 99509340 1 + C A GBM 99509339 + 99509319 99509359 41 CTGGGGAATGTGGAGTTCTTCCGAGGTAAGCCCTGAAGGGC CTGGGGAATGTGGAGTTCTTCAGAGGTAAGCCCTGAAGGGC < 41bp 0.621857805690139 0.833718062444453 0.9298134 0.9434972 prediction 0.423720513508629 Functional Gain - ZFYVE27 ENSG00000155256 CDS Human protein_coding chr10:99509339 chr10:99509340 synonymous SNV . 0 22 hm5C_associated_SNPs_123705 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr10:99509335-99509356
64251 chr7 38247206 38247206 1 + T A HNSC 38247202 + 38247182 38247222 41 ATTCCATCAACCCCACACAACTCATGGCCAGGATTGAGTCC ATTCCATCAACCCCACACAACTCAAGGCCAGGATTGAGTCC < 41bp 0.352477429865687 0.711855926252831 0.015050054 0.051422507 prediction 0.423711852505662 Functional Gain - STARD3NL ENSG00000010270 CDS Human protein_coding chr7:38247202 chr7:38247206 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_123708 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:38247155-38247206
64251 chr16 2120463 2120463 1 + C A PRAD 2120459 + 2120439 2120479 41 TGCGTCCTCTCTCTGCAGACCAAGCTGTACACCCTGCCTGC TGCGTCCTCTCTCTGCAGACCAAGATGTACACCCTGCCTGC < 41bp 0.31459898260522 0.711842562391173 0.2020559 0.5860314 prediction 0.423685124782347 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2120459 chr16:2120463 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_123713 0 0 4 GRWD1 POSTAR2 ENCODE chr16:2120457-2120501
64251 chr2 86677036 86677036 1 + A G STAD 86677033 + 86677013 86677053 41 AGAACATAATTTGGTTTTAGCTGAACGAAAGTCACCTGAAA AGAACATAATTTGGTTTTAGCTGGACGAAAGTCACCTGAAA < 41bp 0.475375446280213 0.711834598900605 0.2034924 0.49857384 prediction 0.423669197801211 Functional Gain - KDM3A ENSG00000115548 CDS Human protein_coding chr2:86677033 chr2:86677036 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_123716 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:86677019-86677050
64251 chr1 53320240 53320240 1 + C T COAD 53320239 + 53320219 53320259 41 CTGATGGAACACTGTGCCTTCCGGAGCATTGGAGTTTCCCT CTGATGGAACACTGTGCCTTCTGGAGCATTGGAGTTTCCCT < 41bp 0.613370032519626 0.825196383854314 0.8698753 0.17472681 prediction 0.423652702669376 Functional Gain - ZYG11A ENSG00000203995 CDS Human protein_coding chr1:53320239 chr1:53320240 nonsynonymous SNV 0.967 0 22 hm5C_associated_SNPs_123720 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:53320221-53320246
64251 chr3 44776595 44776595 1 + C T COAD 44776594 + 44776574 44776614 41 AGTGAGTGTGAAAAAACTTTCCGCAAACAAGCACACCTTAG AGTGAGTGTGAAAAAACTTTCTGCAAACAAGCACACCTTAG < 41bp 0.571251135352993 0.783076119755165 0.102288336 0.6877117 prediction 0.423649968804344 Functional Gain - ZNF501 ENSG00000186446 CDS Human protein_coding chr3:44776594 chr3:44776595 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_123721 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:44776587-44776610
64251 chr3 135969390 135969390 1 + A G LIHC 135969387 + 135969367 135969407 41 GGGCCAACGCCGTATTGACGCGCAGCACAAGCGAGTGAGTC GGGCCAACGCCGTATTGACGCGCGGCACAAGCGAGTGAGTC < 41bp 0.593473729753065 0.805292547265183 0.15448233 0.46356174 prediction 0.423637635024236 Functional Gain - PCCB ENSG00000114054 CDS Human protein_coding chr3:135969387 chr3:135969390 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_123723 0 0 1 EFTUD2 POSTAR2 ENCODE chr3:135969358-135969411
64251 chr3 50677820 50677820 1 + C A COAD 50677819 + 50677799 50677839 41 CCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTAGACCATC CCTGTATGACAGCCCCAAGGCACGGCAGGAGGTAGACCATC < 41bp 0.44518710757934 0.711816988254224 0.08930561 0.08693376 prediction 0.423633976508448 Functional Gain - MAPKAPK3 ENSG00000114738 CDS Human protein_coding chr3:50677819 chr3:50677820 synonymous SNV . 0 22 hm5C_associated_SNPs_123725 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:50677818-50677842
64251 chr8 28908612 28908612 1 + C A STAD 28908608 + 28908588 28908628 41 AATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCCGAC AATGGCAGCAGTCAACCACACTATATTGGCATTGGCCCGAC < 41bp 0.306558332974733 0.711816977711471 0.07168898 0.44625083 prediction 0.423633955422943 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28908608 chr8:28908612 synonymous SNV . 0 25 hm5C_associated_SNPs_123726 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr8:28908603-28908616
64251 chr14 67850106 67850106 1 + A G rs76855584 67850103 + 67850083 67850123 41 AGGCTTGAAAGAGAAAATGCCGAAGTGGATGGAGATGATGA AGGCTTGAAAGAGAAAATGCCGAGGTGGATGGAGATGATGA < 41bp 0.531561414112324 0.743366664163201 0.17708242 0.67559934 prediction 0.423610500101753 Functional Gain - EIF2S1 ENSG00000134001 CDS Human protein_coding chr14:67850103 chr14:67850106 synonymous SNV . 0 24 hm5C_associated_SNPs_123733 0 0 13 RTCB POSTAR2 GSE38201,GSM936508 chr14:67850091-67850117
64251 chr20 34043033 34043033 1 + C G rs189502737 34043029 + 34043009 34043049 41 GCAGCTCAATCGCGGAGCAACTAGCCGGGCGTCTGCGGGAG GCAGCTCAATCGCGGAGCAACTAGGCGGGCGTCTGCGGGAG < 41bp 0.423817507627379 0.711802454745314 0.123621315 0.3593849 prediction 0.423604909490628 Functional Gain - CEP250;GDF5 ENSG00000126001 UTR5 Human protein_coding chr20:34043029 chr20:34043033 . . 0 25 hm5C_associated_SNPs_123735 0 0 3 DDX3X POSTAR2 ENCODE chr20:34043019-34043073
64251 chr7 2472497 2472497 1 + A G STAD 2472494 + 2472474 2472514 41 ACGAGTTTCTGGACAAGTTTCTCAGTGCTGGCGTGAAGCAG ACGAGTTTCTGGACAAGTTTCTCGGTGCTGGCGTGAAGCAG < 41bp 0.608696475858663 0.820497323011503 0.21014586 0.3772115 prediction 0.42360169430568 Functional Gain - CHST12 ENSG00000136213 CDS Human protein_coding chr7:2472494 chr7:2472497 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_123737 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:2472471-2472504
64251 chr14 89075730 89075730 1 + T C UCEC 89075727 + 89075707 89075747 41 TCATGTGAGTAGAAGAATTCCAGTACTGTCTCCAAAACCAG TCATGTGAGTAGAAGAATTCCAGCACTGTCTCCAAAACCAG < 41bp 0.491322600963512 0.711796793057256 0.04561135 0.038463622 prediction 0.423593586114511 Functional Gain - ZC3H14 ENSG00000100722 CDS Human protein_coding chr14:89075727 chr14:89075730 nonsynonymous SNV 0.887 0 24 hm5C_associated_SNPs_123739 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:89075614-89075752
64251 chr10 60546781 60546781 1 + C T COAD 60546780 + 60546760 60546800 41 TAAAAAAGTGATGGAAGAAACCGGATGCCATATCCACTTTC TAAAAAAGTGATGGAAGAAACTGGATGCCATATCCACTTTC < 41bp 0.586711087044626 0.798507373634041 0.660046 0.61541677 prediction 0.423592573178831 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60546780 chr10:60546781 synonymous SNV . 0 22 hm5C_associated_SNPs_123741 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60546757-60546789
64251 chr3 9959658 9959658 1 + T G BRCA 9959655 + 9959635 9959675 41 CATCGTGCCTGCTCCGGGCCCCGTGCTGGCGCCTACGCACC CATCGTGCCTGCTCCGGGCCCCGGGCTGGCGCCTACGCACC < 41bp 0.322604464046971 0.71179474724876 0.23279864 0.79678047 prediction 0.42358949449752 Functional Gain - IL17RC ENSG00000163702 CDS Human protein_coding chr3:9959655 chr3:9959658 nonsynonymous SNV 0.904 4 24 hm5C_associated_SNPs_123743 0 0 5 DDX3X POSTAR2 ENCODE chr3:9959616-9959675
64251 chr17 40125554 40125554 1 + C T LUSC 40125553 + 40125533 40125573 41 TCTCTGCCCTCTTTGTGACACCCAAGACGACTGGGGCCCGG TCTCTGCCCTCTTTGTGACACTCAAGACGACTGGGGCCCGG < 41bp 0.628155068862569 0.839947138631436 0.030604422 0.075107455 prediction 0.423584139537734 Functional Gain - CNP ENSG00000173786 CDS Human protein_coding chr17:40125553 chr17:40125554 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_123745 0 0 5 LIN28B POSTAR2 GSE44616,GSM1087851 chr17:40125528-40125558
64251 chr1 57178308 57178308 1 + C G rs6663750 57178304 + 57178284 57178324 41 GGAGGCCAAAGTGGGTGGATCACCCGAGTTCAGGAGTTCGA GGAGGCCAAAGTGGGTGGATCACCGGAGTTCAGGAGTTCGA < 41bp 0.454894807535264 0.711777155148803 0.17999208 0.35916758 prediction 0.423554310297607 Functional Gain - PRKAA2 ENSG00000162409 UTR3 Human protein_coding chr1:57178304 chr1:57178308 . . 0 25 hm5C_associated_SNPs_123747 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:57178301-57178323
64251 chr1 150300881 150300881 1 + C T SKCM 150300880 + 150300860 150300900 41 GAAGAAGAGCCAGAGGTGATCCCTGGGCCTCCATCAGAGAG GAAGAAGAGCCAGAGGTGATCTCTGGGCCTCCATCAGAGAG < 41bp 0.451110006052394 0.711774165516675 0.13404447 0.2586385 prediction 0.42354833103335 Functional Gain - PRPF3 ENSG00000117360 CDS Human protein_coding chr1:150300880 chr1:150300881 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_123748 0 0 8 DDX24 POSTAR2 ENCODE chr1:150300833-150300898
64251 chr1 114454667 114454667 1 + C T BLCA 114454666 + 114454646 114454686 41 GGCCATGGTTCTCCCCTGTCCCACAGCAGCAAGGGCACCCC GGCCATGGTTCTCCCCTGTCCTACAGCAGCAAGGGCACCCC < 41bp 0.604954372890184 0.816725446380627 0.09825572 0.5760948 prediction 0.423542146980887 Functional Gain - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114454666 chr1:114454667 nonsynonymous SNV 0.090 0 22 hm5C_associated_SNPs_123750 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:114454629-114454669
64251 chr5 110098249 110098249 1 + C A rs147559723 110098248 + 110098228 110098268 41 ATCCTTGTCCATATCCAAACCCAGTGTTTCAGTGCTAGCAA ATCCTTGTCCATATCCAAACCAAGTGTTTCAGTGCTAGCAA < 41bp 0.474343518612972 0.71176135497763 0.016854197 0.054659754 prediction 0.423522709955259 Functional Gain - SLC25A46 ENSG00000164209 UTR3 Human protein_coding chr5:110098248 chr5:110098249 . . 0 22 hm5C_associated_SNPs_123758 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:110098227-110098265
64251 chr2 211473157 211473157 1 + C A rs41272667 211473156 + 211473136 211473176 41 AGAAATTAAGAACGTCGTATCCGGGAAGACATCAGCCTGTT AGAAATTAAGAACGTCGTATCAGGGAAGACATCAGCCTGTT < 41bp 0.448370862773755 0.7117468070929 0.8833562 0.9215826 prediction 0.4234936141858 Functional Gain - CPS1 ENSG00000021826 CDS Human protein_coding chr2:211473156 chr2:211473157 synonymous SNV . 0 22 hm5C_associated_SNPs_123762 2 0 3 CSTF2 POSTAR2 GSE40859,GSM1003587 chr2:211473140-211473160
64251 chr21 37444968 37444968 1 + C T SKCM 37444967 + 37444947 37444987 41 GTCACCGTTCTGTCCAGGATCCACGCCAGGAAACTGAGTGA GTCACCGTTCTGTCCAGGATCTACGCCAGGAAACTGAGTGA < 41bp 0.555735104709833 0.767477080081657 0.29482752 0.27578694 prediction 0.423483950743648 Functional Gain - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37444967 chr21:37444968 nonsynonymous SNV 0.901 0 22 hm5C_associated_SNPs_123765 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:37444940-37444968
64251 chr5 169129422 169129422 1 + A G rs2306559 169129419 + 169129399 169129439 41 TGTGTGTGCGCGGAGGATGGCAAAACGCTGCCTGTAAGGGA TGTGTGTGCGCGGAGGATGGCAAGACGCTGCCTGTAAGGGA < 41bp 0.483806744004947 0.711730941187079 0.15299368 0.24559242 prediction 0.423461882374159 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169129419 chr5:169129422 synonymous SNV . 0 24 hm5C_associated_SNPs_123772 0 0 1 DDX24 POSTAR2 ENCODE chr5:169129367-169129425
64251 chr19 44471010 44471010 1 + T C UCEC 44471007 + 44470987 44471027 41 AATGGAGAAAAGCCATATAACTGTGAGGAGTGTGGTAAGGA AATGGAGAAAAGCCATATAACTGCGAGGAGTGTGGTAAGGA < 41bp 0.545357306182378 0.75708791056232 0.10127133 0.14387515 prediction 0.423461208759885 Functional Gain - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44471007 chr19:44471010 synonymous SNV . 0 24 hm5C_associated_SNPs_123774 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44470999-44471014
64251 chr7 90895933 90895933 1 + C T SKCM 90895932 + 90895912 90895952 41 AGCTGCAAGAGCTACGCTATCCCCTGCCCTCACCTCCAGGC AGCTGCAAGAGCTACGCTATCTCCTGCCCTCACCTCCAGGC < 41bp 0.46337918495706 0.711725507883611 0.16562945 0.19307688 prediction 0.423451015767222 Functional Gain - FZD1 ENSG00000157240 CDS Human protein_coding chr7:90895932 chr7:90895933 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_123776 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:90895920-90895940
64251 chr14 95034589 95034589 1 + C T PRAD 95034588 + 95034568 95034608 41 CTCCAAGTGGGCTGACTTATCCGGCATCACCAAACAGCAAA CTCCAAGTGGGCTGACTTATCTGGCATCACCAAACAGCAAA < 41bp 0.589656369677304 0.80137688225751 0.8968972 0.8395648 prediction 0.423441025160412 Functional Gain - SERPINA4 ENSG00000100665 CDS Human protein_coding chr14:95034588 chr14:95034589 synonymous SNV . 0 22 hm5C_associated_SNPs_123779 0 0 2 RPS3 POSTAR2 ENCODE chr14:95034525-95034592
64251 chr1 22417930 22417930 1 + A G STAD 22417927 + 22417907 22417947 41 CTACCCCTTTTCAGAAAGGCCTAAAGAATGTATTTGACGAA CTACCCCTTTTCAGAAAGGCCTAGAGAATGTATTTGACGAA < 41bp 0.520229212324793 0.731943120412685 0.04415542 0.036620498 prediction 0.423427816175786 Functional Gain - CDC42 ENSG00000070831 CDS Human protein_coding chr1:22417927 chr1:22417930 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_123780 0 0 4 RPS3 POSTAR2 ENCODE chr1:22417920-22417941
64251 chr1 53708157 53708157 1 + C T rs144711851 53708156 + 53708136 53708176 41 AGTGAGATGCAGCACCCCATCCTCAGCCCCCTCGCCTCTGG AGTGAGATGCAGCACCCCATCTTCAGCCCCCTCGCCTCTGG < 41bp 0.59182387406644 0.803534900665516 0.062879026 0.1967713 prediction 0.423422053198151 Functional Gain - LOC100507564 ENSG00000226754;ENSG00000270172 ncRNA_exonic Human other chr1:53708156 chr1:53708157 . . 0 22 hm5C_associated_SNPs_123781 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:53708126-53708176
64251 chrX 135289283 135289283 1 + T C BLCA 135289280 + 135289260 135289300 41 TGGCCAAGGACAACAAGATCCTGTGCAACAAGTGCACCACT TGGCCAAGGACAACAAGATCCTGCGCAACAAGTGCACCACT < 41bp 0.510054239773372 0.721764546065848 0.31022137 0.33796352 prediction 0.423420612584953 Functional Gain - FHL1 ENSG00000022267 CDS Human protein_coding chrX:135289280 chrX:135289283 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_123782 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:135289276-135289307
64251 chr20 34132204 34132204 1 + T C rs6060456 34132202 + 34132182 34132222 41 TTCTTGGCATCAGCTTTCCTCATGATGGCTGGGACATTGCT TTCTTGGCATCAGCTTTCCTCACGATGGCTGGGACATTGCT < 41bp 0.570595682114699 0.782301275395007 0.39368448 0.4519651 prediction 0.423411186560616 Functional Gain - ERGIC3 ENSG00000224497 ncRNA_exonic Human processed_pseudogene chr20:34132202 chr20:34132204 . . 0 23 hm5C_associated_SNPs_123784 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:34132134-34132216
64251 chr1 32660512 32660512 1 + C T COAD 32660511 + 32660491 32660531 41 TTCTTTCCCTAGAAAACAGTCCGGGATAAAGAACTGGAGGG TTCTTTCCCTAGAAAACAGTCTGGGATAAAGAACTGGAGGG < 41bp 0.482026781286133 0.711703440398998 0.57333785 0.56606346 prediction 0.423406880797996 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32660511 chr1:32660512 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_123785 0 0 26 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:32660500-32660520
64251 chr12 52448449 52448449 1 + C T SKCM 52448448 + 52448428 52448468 41 TTCCAGGTGTACGGCTGCTACCCCGGCCCCCTGAGCGGCCC TTCCAGGTGTACGGCTGCTACTCCGGCCCCCTGAGCGGCCC < 41bp 0.629672771055032 0.841369774102884 0.3813545 0.49136224 prediction 0.423394006095705 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448448 chr12:52448449 nonsynonymous SNV 0.953 4 22 hm5C_associated_SNPs_123786 0 0 1 PCBP2 POSTAR2 ENCODE chr12:52448355-52448459
64251 chr5 179260154 179260154 1 + C T LIHC 179260153 + 179260133 179260173 41 CCAAGCAGCTGCTGCTCTGACCCCAGCAAGCCGGGTGGGAA CCAAGCAGCTGCTGCTCTGACTCCAGCAAGCCGGGTGGGAA < 41bp 0.645306513760753 0.857000801243325 0.15964463 0.8986474 prediction 0.423388574965145 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179260153 chr5:179260154 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_123789 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr5:179260142-179260163
64251 chr12 2994642 2994642 1 + T C UCEC 2994640 + 2994620 2994660 41 TGTGCATCTACACAGCTTCCCATCACTCACACTCGACAGGT TGTGCATCTACACAGCTTCCCACCACTCACACTCGACAGGT < 41bp 0.438056147251385 0.711690532827749 0.018372744 0.005004406 prediction 0.423381065655499 Functional Gain - RHNO1 ENSG00000171792 CDS Human protein_coding chr12:2994640 chr12:2994642 nonsynonymous SNV 0.007 0 23 hm5C_associated_SNPs_123791 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:2994601-2994646
64251 chr2 176989358 176989358 1 + C A rs114041172 176989357 + 176989337 176989377 41 GCGACAACAGTGCGGACACCCCGGCTGCTAGCCCACGGTGA GCGACAACAGTGCGGACACCCAGGCTGCTAGCCCACGGTGA < 41bp 0.60967140635226 0.821358285533157 0.8221674 0.91093194 prediction 0.423373758361794 Functional Gain - HOXD9 ENSG00000237380 ncRNA_intronic Human antisense chr2:176989357 chr2:176989358 . . 0 22 hm5C_associated_SNPs_123792 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:176989322-176989358
64251 chr19 3543426 3543426 1 + C T rs528470674 3543425 + 3543405 3543445 41 CCCTTCCGCGAGGCCTACAACCGCTGGCACAGCTGCTACCA CCCTTCCGCGAGGCCTACAACTGCTGGCACAGCTGCTACCA < 41bp 0.594808507926264 0.806494679163696 0.12251547 0.21504462 prediction 0.423372342474863 Functional Gain - C19orf71 ENSG00000183397 CDS Human protein_coding chr19:3543425 chr19:3543426 nonsynonymous SNV 0.003 1 22 hm5C_associated_SNPs_123793 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:3543420-3543440
64251 chr1 168282086 168282086 1 + A G SKCM 168282083 + 168282063 168282103 41 ACCCCCTTCTGTGCTCTCCACCCAAGCACCCACTTCGGCTG ACCCCCTTCTGTGCTCTCCACCCGAGCACCCACTTCGGCTG < 41bp 0.611850540520023 0.823536655792556 0.039319694 0.23374864 prediction 0.423372230545066 Functional Gain - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168282083 chr1:168282086 nonsynonymous SNV 0.029 1 24 hm5C_associated_SNPs_123794 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:168282057-168282088
64251 chr1 201823789 201823789 1 + C A SKCM 201823788 + 201823768 201823808 41 GAGGCCTTTGTTCAGGCCCTCCAGATACCAGATGGCCCCAC GAGGCCTTTGTTCAGGCCCTCAAGATACCAGATGGCCCCAC < 41bp 0.450451184982293 0.711680453179284 0.6487206 0.8792349 prediction 0.423360906358569 Functional Gain - IPO9 ENSG00000198700 CDS Human protein_coding chr1:201823788 chr1:201823789 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_123796 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:201823779-201823812
64251 chr1 44365346 44365346 1 + T A LUAD 44365342 + 44365322 44365362 41 GATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTT GATTCTCTCTTTGTCCTCGCCGGCATCAAGTGGCAGGACTT < 41bp 0.436866034858313 0.71168032627954 0.8399948 0.76462907 prediction 0.42336065255908 Functional Gain - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44365342 chr1:44365346 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_123797 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44365334-44365366
64251 chr18 29116339 29116339 1 + T C LIHC 29116337 + 29116317 29116357 41 AGTGGCCCTTTCAGTTTCTCCGTCATTGACAAACCACCTGG AGTGGCCCTTTCAGTTTCTCCGCCATTGACAAACCACCTGG < 41bp 0.65962269823794 0.871299570319625 0.18651554 0.54762787 prediction 0.423353744163369 Functional Gain - DSG2 ENSG00000046604 CDS Human protein_coding chr18:29116337 chr18:29116339 nonsynonymous SNV 0.664 1 23 hm5C_associated_SNPs_123799 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012388 chr18:29116301-29116344
64251 chr12 124086736 124086736 1 + T G rs141195308 124086733 + 124086713 124086753 41 GGGCTCCTGGGAGTCGCTGCCTGTGCCGCTGCACCCGCAGG GGGCTCCTGGGAGTCGCTGCCTGGGCCGCTGCACCCGCAGG < 41bp 0.719129221062741 0.930801891011497 0.054997385 0.32783 prediction 0.423345339897514 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124086733 chr12:124086736 nonsynonymous SNV 0.021 0 24 hm5C_associated_SNPs_123800 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:124086712-124086741
64251 chr10 13230995 13230995 1 + C T rs116465689 13230994 + 13230974 13231014 41 CGAATTCCAAAGAAGTTTGCCCGCAGAGGCACCAGCCTCAA CGAATTCCAAAGAAGTTTGCCTGCAGAGGCACCAGCCTCAA < 41bp 0.63036319367787 0.842034203804295 0.11697501 0.29671308 prediction 0.42334202025285 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13230994 chr10:13230995 nonsynonymous SNV 0.852 1 22 hm5C_associated_SNPs_123801 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:13230974-13230995
64251 chr1 229795070 229795070 1 + T G rs1048306 229795067 + 229795047 229795087 41 CTATGGGACAGAAGTGCCGCCAGTGACACTGTCCAGAGGCT CTATGGGACAGAAGTGCCGCCAGGGACACTGTCCAGAGGCT < 41bp 0.316146830545266 0.711669031905198 0.082588166 0.8024825 prediction 0.423338063810397 Functional Gain - URB2 ENSG00000135763 UTR3 Human protein_coding chr1:229795067 chr1:229795070 . . 0 24 hm5C_associated_SNPs_123803 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704216 chr1:229795059-229795080
64251 chr9 101891231 101891231 1 + A G rs112051451 101891228 + 101891208 101891248 41 TCTGTCACAGAGACCACAGACAAAGTTATACACAACAGCAT TCTGTCACAGAGACCACAGACAAGGTTATACACAACAGCAT < 41bp 0.544423780368118 0.756089279302475 0.26968265 0.4085963 prediction 0.423330997868713 Functional Gain - TGFBR1 ENSG00000106799 CDS Human protein_coding chr9:101891228 chr9:101891231 synonymous SNV . 0 24 hm5C_associated_SNPs_123804 2 0 2 DDX3X POSTAR2 ENCODE chr9:101891166-101891255
64251 chr9 138011583 138011583 1 + C T COAD 138011582 + 138011562 138011602 41 GACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACC GACCCGCAGCCTGGACTATGCTGGTTACAACAACATGTACC < 41bp 0.471515694256127 0.711654223629867 0.19110727 0.15819421 prediction 0.423308447259733 Functional Gain - OLFM1 ENSG00000130558 CDS Human protein_coding chr9:138011582 chr9:138011583 synonymous SNV . 0 22 hm5C_associated_SNPs_123807 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr9:138011536-138011664
64251 chr12 48361973 48361973 1 + T G LUSC 48361971 + 48361951 48361991 41 CCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGA CCCAGAGCTCCTTGGAGACACAGCACTATGTGGATTGTGGA < 41bp 0.384430397748999 0.711653854993185 0.13753971 0.16123196 prediction 0.42330770998637 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48361971 chr12:48361973 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_123810 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:48361913-48362147
64251 chr20 31611438 31611438 1 + C A rs6059018 31611434 + 31611414 31611454 41 CCTCCTTCCTCTGCCCCACCCCAGCGGGGAGCAGACTGCTC CCTCCTTCCTCTGCCCCACCCCAGAGGGGAGCAGACTGCTC < 41bp 0.371893347514072 0.711647069041754 0.1848506 0.40253097 prediction 0.423294138083508 Functional Gain - BPIFB2 ENSG00000078898 UTR3 Human protein_coding chr20:31611434 chr20:31611438 . . 0 25 hm5C_associated_SNPs_123813 0 0 8 DDX59 POSTAR2 ENCODE chr20:31611422-31611460
64251 chr3 170108078 170108078 1 + A G UCEC 170108075 + 170108055 170108095 41 TCTGCCACTTGCAACTTAGTCAGAGACATAAACAAAGTGGG TCTGCCACTTGCAACTTAGTCAGGGACATAAACAAAGTGGG < 41bp 0.57591394566178 0.78755947539109 0.8613254 0.88653076 prediction 0.423291059458619 Functional Gain - SKIL ENSG00000136603 CDS Human protein_coding chr3:170108075 chr3:170108078 synonymous SNV . 0 24 hm5C_associated_SNPs_123814 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr3:170108065-170108091
64251 chr14 21464860 21464860 1 + C T STAD 21464859 + 21464839 21464879 41 CATGCTGTGCTCACAGCCCGCCGGCACGGCAGGTATGGGGG CATGCTGTGCTCACAGCCCGCTGGCACGGCAGGTATGGGGG < 41bp 0.573590041555297 0.785233853039944 0.054171145 0.07915044 prediction 0.423287622969293 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464859 chr14:21464860 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_123815 0 0 4 PPIG POSTAR2 ENCODE chr14:21464833-21464886
64251 chr19 42402593 42402593 1 + C T rs2303797 42402592 + 42402572 42402612 41 ACAAGGCCTCTGTCCACAGCCCCGAGCCTGGAGATGAGGGG ACAAGGCCTCTGTCCACAGCCTCGAGCCTGGAGATGAGGGG < 41bp 0.463127607969403 0.711634271605345 0.3439476 0.51713824 prediction 0.42326854321069 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42402592 chr19:42402593 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_123818 0 0 9 BUD13 POSTAR2 ENCODE chr19:42402562-42402601
64251 chr8 19805739 19805739 1 + C G LAML 19805738 + 19805718 19805758 41 GTAAATTTGCCCTAAGGACCCCTGAAGACACAGCTGAGGAC GTAAATTTGCCCTAAGGACCCGTGAAGACACAGCTGAGGAC < 41bp 0.392223381617522 0.711630854968539 0.033729136 0.05584523 prediction 0.423261709937078 Functional Gain - LPL ENSG00000175445 CDS Human protein_coding chr8:19805738 chr8:19805739 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_123821 0 0 2 HNRNPU POSTAR2 GSE34491,GSM850170 chr8:19805720-19805740
64251 chr2 120005733 120005733 1 + C T SKCM 120005732 + 120005712 120005752 41 CCCTCTACAGCTTCTGCTTGCCGCTGCGCCGCGCCCACCGC CCCTCTACAGCTTCTGCTTGCTGCTGCGCCGCGCCCACCGC < 41bp 0.456128502878381 0.711617516421492 0.12197411 0.15128693 prediction 0.423235032842984 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120005732 chr2:120005733 nonsynonymous SNV 0.016 4 22 hm5C_associated_SNPs_123824 0 0 4 RPS3 POSTAR2 ENCODE chr2:120005687-120005749
64251 chr19 10748590 10748590 1 + T C CESC 10748588 + 10748568 10748608 41 AGGAATGCCTTCTTCCTGCTCATGAGAAACATCATCAGGTC AGGAATGCCTTCTTCCTGCTCACGAGAAACATCATCAGGTC < 41bp 0.646295893097279 0.857911605622316 0.18759441 0.23044941 prediction 0.423231425050075 Functional Gain - SLC44A2 ENSG00000129353 CDS Human protein_coding chr19:10748588 chr19:10748590 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_123825 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:10748550-10748593
64251 chr16 2551147 2551147 1 + C T rs62040717 2551146 + 2551126 2551166 41 CTGGGGTTTGGGCTGGGCTTCCCCAGTCCACCTGCATCTGG CTGGGGTTTGGGCTGGGCTTCTCCAGTCCACCTGCATCTGG < 41bp 0.534823407394257 0.746438258425559 0.37295702 0.9515091 prediction 0.423229702062604 Functional Gain - TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2551146 chr16:2551147 . . 0 22 hm5C_associated_SNPs_123826 1 0 5 DROSHA POSTAR2 ENCODE chr16:2551136-2551151
64251 chr2 201756722 201756722 1 + T C UCEC 201756720 + 201756700 201756740 41 ACAGTCCGGTTTGTAGATTCCCTGATCTGCAATTCTTCCCG ACAGTCCGGTTTGTAGATTCCCCGATCTGCAATTCTTCCCG < 41bp 0.628085962502111 0.839686817722785 0.19402206 0.069734275 prediction 0.423201710441348 Functional Gain - NIF3L1 ENSG00000196290 CDS Human protein_coding chr2:201756720 chr2:201756722 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_123831 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr2:201756674-201756729
64251 chr19 50154606 50154606 1 + C A UCEC 50154605 + 50154585 50154625 41 CTTCCCAGGTGACGAGAGCCCCCGCCCGGACGCGCAGCCCA CTTCCCAGGTGACGAGAGCCCACGCCCGGACGCGCAGCCCA < 41bp 0.452075122123313 0.711599234365715 0.08182901 0.22629705 prediction 0.42319846873143 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154605 chr19:50154606 synonymous SNV . 0 22 hm5C_associated_SNPs_123832 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:50154576-50154616
64251 chr16 67913372 67913372 1 + C A UCEC 67913371 + 67913351 67913391 41 GCTGAACCCTGATGTGGTGGCCCCACTGCCCACCCACACTG GCTGAACCCTGATGTGGTGGCACCACTGCCCACCCACACTG < 41bp 0.624882034508199 0.836480575152983 0.077962846 0.092906445 prediction 0.423197081289568 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67913371 chr16:67913372 synonymous SNV . 0 22 hm5C_associated_SNPs_123833 0 0 2 DDX24 POSTAR2 ENCODE chr16:67913323-67913381
64251 chr2 73471708 73471708 1 + C T UCEC 73471707 + 73471687 73471727 41 GCTGGAAAAGTGTGCCATGACCGCTCTGAGCTCCAAGCTGA GCTGGAAAAGTGTGCCATGACTGCTCTGAGCTCCAAGCTGA < 41bp 0.61177185919033 0.823370160523595 0.13363701 0.16750666 prediction 0.423196602666531 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73471707 chr2:73471708 synonymous SNV . 0 22 hm5C_associated_SNPs_123834 0 0 30 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:73471678-73471738
64251 chr8 56699158 56699158 1 + A G rs148830309 56699155 + 56699135 56699175 41 ACCTTGGAACTTTCCTGATACAAAGGAAGAATGGGAGCAAC ACCTTGGAACTTTCCTGATACAAGGGAAGAATGGGAGCAAC < 41bp 0.480369169382648 0.711577740998431 0.033869684 0.27045256 prediction 0.423155481996862 Functional Gain - TGS1 ENSG00000137574 CDS Human protein_coding chr8:56699155 chr8:56699158 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_123839 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:56699121-56699158
64251 chr1 31837089 31837089 1 + T C rs12139997 31837087 + 31837067 31837107 41 GAGAGTAAGAAACCAGGAGCCTTGTGCCTTGAGACTCCTGG GAGAGTAAGAAACCAGGAGCCTCGTGCCTTGAGACTCCTGG < 41bp 0.457591311854936 0.711567361835021 0.22891766 0.20754516 prediction 0.423134723670042 Functional Gain - ZCCHC17 ENSG00000121766 UTR3 Human protein_coding chr1:31837087 chr1:31837089 . . 0 23 hm5C_associated_SNPs_123844 0 0 7 AGGF1 POSTAR2 ENCODE chr1:31837037-31837110
64251 chr12 100706286 100706286 1 + A G PRAD 100706283 + 100706263 100706303 41 AAATCCTGAATATTTGGCTCCTGAATACATACTTTCTGTGA AAATCCTGAATATTTGGCTCCTGGATACATACTTTCTGTGA < 41bp 0.488427340845893 0.711565093667994 0.2355296 0.42243135 prediction 0.423130187335988 Functional Gain - SCYL2 ENSG00000136021 CDS Human protein_coding chr12:100706283 chr12:100706286 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_123845 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:100706268-100706288
64251 chr1 44156708 44156708 1 + C T PRAD 44156707 + 44156687 44156727 41 TCCTGCAAGAAGTGCAGCGTCCGGGTCCATGCCAGTGAGTG TCCTGCAAGAAGTGCAGCGTCTGGGTCCATGCCAGTGAGTG < 41bp 0.579714816528497 0.791270857919718 0.45140013 0.32355154 prediction 0.423112082782441 Functional Gain - KDM4A ENSG00000066135 CDS Human protein_coding chr1:44156707 chr1:44156708 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_123851 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr1:44156695-44156717
64251 chr22 46452769 46452769 1 + C T rs147982350 46452768 + 46452748 46452788 41 AGATGGAATTCGCCGTTTTGCCGCGATTTGGCGTTAACTTA AGATGGAATTCGCCGTTTTGCTGCGATTTGGCGTTAACTTA < 41bp 0.524459258117803 0.73600231409378 0.13820869 0.049726248 prediction 0.423086111951955 Functional Gain - PRR34-AS1 ENSG00000241990 ncRNA_exonic Human antisense chr22:46452768 chr22:46452769 . . 0 22 hm5C_associated_SNPs_123857 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:46452762-46452791
64251 chr15 83788350 83788350 1 + C T rs529704524 83788349 + 83788329 83788369 41 GGGTGAACCGTATCTGAACACCGCATATGGGCACATGATCT GGGTGAACCGTATCTGAACACTGCATATGGGCACATGATCT < 41bp 0.612412805899928 0.82395523554432 0.18101618 0.23851287 prediction 0.423084859288784 Functional Gain - TM6SF1 ENSG00000136404 CDS Human protein_coding chr15:83788349 chr15:83788350 synonymous SNV . 0 22 hm5C_associated_SNPs_123858 0 0 1 SF3B1 POSTAR2 ENCODE chr15:83788336-83788359
64251 chr6 111588294 111588294 1 + A G STAD 111588291 + 111588271 111588311 41 TGCCCATGTGAAGCACTTGCCAGAAACCAGGACAAAAGGGA TGCCCATGTGAAGCACTTGCCAGGAACCAGGACAAAAGGGA < 41bp 0.478549592686477 0.711542162753222 0.37801751 0.5146341 prediction 0.423084325506444 Functional Gain - MFSD4B ENSG00000173214 CDS Human protein_coding chr6:111588291 chr6:111588294 nonsynonymous SNV 0.151 0 24 hm5C_associated_SNPs_123859 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr6:111588275-111588303
64251 chr2 74757348 74757348 1 + T C rs150047108 74757346 + 74757326 74757366 41 GTCACTGAACCCCGAGCATGCCTGACGTCTGGGACCCCGGG GTCACTGAACCCCGAGCATGCCCGACGTCTGGGACCCCGGG < 41bp 0.577072636716971 0.788613373910887 0.15908629 0.23875687 prediction 0.423081474387833 Functional Gain - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757346 chr2:74757348 nonsynonymous SNV 0.089 1 23 hm5C_associated_SNPs_123861 1 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:74757342-74757371
64251 chr17 3628867 3628867 1 + C T STAD 3628866 + 3628846 3628886 41 CAAAGAGTTGAGCCTCTTATCCGGTGAAGTGTGCAACCGCA CAAAGAGTTGAGCCTCTTATCTGGTGAAGTGTGCAACCGCA < 41bp 0.562913064800868 0.774453257030998 0.9497075 0.9198923 prediction 0.42308038446026 Functional Gain - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3628866 chr17:3628867 synonymous SNV . 0 22 hm5C_associated_SNPs_123862 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr17:3628855-3628878
64251 chr14 96848810 96848810 1 + T A UCEC 96848806 + 96848786 96848826 41 GTGGAAACAAAGGAAAGAAACAGATATTGCCTAGAACTCAC GTGGAAACAAAGGAAAGAAACAGAAATTGCCTAGAACTCAC < 41bp 0.581186948835565 0.79271114527951 0.46775383 0.47025332 prediction 0.423048392887889 Functional Gain - GSKIP ENSG00000100744 CDS Human protein_coding chr14:96848806 chr14:96848810 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_123868 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:96848783-96848819
64251 chr3 180320104 180320104 1 + T G LIHC 180320101 + 180320081 180320121 41 ATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCGAA ATTGCCACGGGTCGTCTTTGCTCGCTCTACTTCGGAGCGAA < 41bp 0.328743109632089 0.711516742045558 0.17402333 0.34552538 prediction 0.423033484091115 Functional Gain - TTC14 ENSG00000163728 CDS Human protein_coding chr3:180320101 chr3:180320104 nonsynonymous SNV 0.014 0 24 hm5C_associated_SNPs_123870 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:180320074-180320112
64251 chr19 58048645 58048645 1 + C T READ 58048644 + 58048624 58048664 41 TGCGCAAGGAGTGTCACAGGCCAGGACTCCAAAGCTAGGTC TGCGCAAGGAGTGTCACAGGCTAGGACTCCAAAGCTAGGTC < 41bp 0.559759214608995 0.77125056272522 0.029662073 0.015897334 prediction 0.422982696232449 Functional Gain - ZNF549 ENSG00000121406 CDS Human protein_coding chr19:58048644 chr19:58048645 synonymous SNV . 0 22 hm5C_associated_SNPs_123878 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:58048629-58048658
64251 chr9 80881579 80881579 1 + C T SKCM 80881578 + 80881558 80881598 41 AAGAAAAGAAGAGGAGTTGTCCAGAAATAGCAGATCTTCTT AAGAAAAGAAGAGGAGTTGTCTAGAAATAGCAGATCTTCTT < 41bp 0.551619091315294 0.76310925660223 0.3565092 0.17283547 prediction 0.422980330573872 Functional Gain - CEP78 ENSG00000148019 CDS Human protein_coding chr9:80881578 chr9:80881579 synonymous SNV . 0 22 hm5C_associated_SNPs_123879 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr9:80881562-80881585
64251 chr6 28331573 28331573 1 + T A rs213227 28331571 + 28331551 28331591 41 GAGATGAAAAGCAGGAGAACCATGGCAGCCTGGTCTCCCTG GAGATGAAAAGCAGGAGAACCAAGGCAGCCTGGTCTCCCTG < 41bp 0.501764479404416 0.713253728468971 0.36553788 0.874401 prediction 0.42297849812911 Functional Gain - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28331571 chr6:28331573 nonsynonymous SNV 0.756 0 23 hm5C_associated_SNPs_123881 0 0 1 KHSRP POSTAR2 ENCODE chr6:28331564-28331689
64251 chr21 47552571 47552571 1 + C G rs538537601 47552568 + 47552548 47552588 41 AGCACCGCTGCTCACTCGGACGACGCCCTGGGCCTGCACCT AGCACCGCTGCTCACTCGGACGAGGCCCTGGGCCTGCACCT < 41bp 0.506599451091061 0.718087702149095 0.18849054 0.7957845 prediction 0.422976502116069 Functional Gain - COL6A2 ENSG00000142173 UTR3 Human protein_coding chr21:47552568 chr21:47552571 . . 0 24 hm5C_associated_SNPs_123882 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:47552557-47552594
64251 chr17 41004027 41004027 1 + C T STAD 41004026 + 41004006 41004046 41 CGTGGTCTGCAATCAGGGGACCGGGCCACCTGGTTTGGCCT CGTGGTCTGCAATCAGGGGACTGGGCCACCTGGTTTGGCCT < 41bp 0.481814717540006 0.711487366882765 0.9181795 0.9168086 prediction 0.422974733765531 Functional Gain - AOC3 ENSG00000131471 CDS Human protein_coding chr17:41004026 chr17:41004027 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_123883 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:41004016-41004060
64251 chr12 113624562 113624562 1 + C T LUAD 113624561 + 113624541 113624581 41 CCACAGGCAGCATGAAGACCCCCGTGGAGCTGGCCGTCAGT CCACAGGCAGCATGAAGACCCTCGTGGAGCTGGCCGTCAGT < 41bp 0.468463526937296 0.71148165370075 0.31532317 0.3824662 prediction 0.4229633074015 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113624561 chr12:113624562 nonsynonymous SNV 0.212 0 22 hm5C_associated_SNPs_123884 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:113624550-113624572
64251 chr19 10396651 10396651 1 + T C rs142396903 10396649 + 10396629 10396669 41 CAAATGGGGCTGGGACTTCTCATTGGCCAACCTGCCTTTCC CAAATGGGGCTGGGACTTCTCACTGGCCAACCTGCCTTTCC < 41bp 0.48879772922014 0.711467929371084 0.31321082 0.31418562 prediction 0.422935858742169 Functional Gain - ICAM1 ENSG00000267607 ncRNA_exonic Human antisense chr19:10396649 chr19:10396651 . . 0 23 hm5C_associated_SNPs_123889 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:10396612-10396652
64251 chr20 34502066 34502066 1 + C T UCEC 34502065 + 34502045 34502085 41 AGCCAGGGGTCCATATGAGCCCGCAGCTTCATGGCCCAGAA AGCCAGGGGTCCATATGAGCCTGCAGCTTCATGGCCCAGAA < 41bp 0.637975216722035 0.849441925535786 0.031671166 0.031147689 prediction 0.422933417627501 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34502065 chr20:34502066 nonsynonymous SNV 0.981 2 22 hm5C_associated_SNPs_123890 0 0 5 GRWD1 POSTAR2 ENCODE chr20:34501999-34502092
64251 chr11 65826341 65826341 1 + C T SKCM 65826340 + 65826320 65826360 41 ACCGAAAGAAGAAGAAAAAGCCCCAGCGGGTGCGAGGGGTG ACCGAAAGAAGAAGAAAAAGCTCCAGCGGGTGCGAGGGGTG < 41bp 0.644085729709098 0.855545469781163 0.41103962 0.8758652 prediction 0.422919480144129 Functional Gain - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65826340 chr11:65826341 nonsynonymous SNV 0.995 0 22 hm5C_associated_SNPs_123892 0 0 22 CSTF2 POSTAR2 GSE40859,GSM1003587 chr11:65826327-65826348
64251 chr1 171766554 171766554 1 + T C rs140637743 171766552 + 171766532 171766572 41 GACCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGCAGAC GACCTGGCCCCATGGCTTTGCACGTTAGAGACCTGGCAGAC < 41bp 0.528435214237357 0.739890045491451 0.13396335 0.2365615 prediction 0.422909662508187 Functional Gain - METTL13 ENSG00000010165 UTR3 Human protein_coding chr1:171766552 chr1:171766554 . . 0 23 hm5C_associated_SNPs_123896 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:171766502-171766574
64251 chr19 50099088 50099088 1 + C A LUSC 50099087 + 50099067 50099107 41 CCACATGTCAGAGCTACTCCCCGGACCAGCTGCAGGGGCAG CCACATGTCAGAGCTACTCCCAGGACCAGCTGCAGGGGCAG < 41bp 0.626571822887994 0.838011794333545 0.7631545 0.8972051 prediction 0.422879942891103 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099087 chr19:50099088 nonsynonymous SNV 0.967 3 22 hm5C_associated_SNPs_123902 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50099075-50099101
64251 chr1 207850749 207850749 1 + C A LUSC 207850748 + 207850728 207850768 41 CCCCAGATCAATGCAATGTCCCGGAATGGCTTCCATTTGCC CCCCAGATCAATGCAATGTCCAGGAATGGCTTCCATTTGCC < 41bp 0.62635003537144 0.837789578369456 0.25116956 0.42703488 prediction 0.422879085996031 Functional Gain - CR1L ENSG00000197721 CDS Human protein_coding chr1:207850748 chr1:207850749 nonsynonymous SNV 0.004 4 22 hm5C_associated_SNPs_123903 0 0 3 DDX24 POSTAR2 ENCODE chr1:207850733-207850749
64251 chr16 90025426 90025426 1 + C T SKCM 90025425 + 90025405 90025445 41 TGACTCACCCTCTGCAGGACCCCAATGAGGATGAGCCAAAC TGACTCACCCTCTGCAGGACCTCAATGAGGATGAGCCAAAC < 41bp 0.442662454407465 0.711437560787992 0.086814255 0.62820363 prediction 0.422875121575985 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90025425 chr16:90025426 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_123904 0 0 1 BUD13 POSTAR2 ENCODE chr16:90025349-90025438
64251 chr19 54697194 54697194 1 + C G LIHC 54697190 + 54697170 54697210 41 GATGGTAAGGTGGTCTACACCTCCCTGCAATGGGCCAGCCT GATGGTAAGGTGGTCTACACCTCCGTGCAATGGGCCAGCCT < 41bp 0.651225958041273 0.862645181852592 0.42038497 0.3264696 prediction 0.422838447622637 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54697190 chr19:54697194 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_123907 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:54697170-54697196
64251 chr17 8193136 8193136 1 + A G LUAD 8193133 + 8193113 8193153 41 CTGTTCCCCCACCCCAAGCCCTGACAACAGGTCATCTCTTG CTGTTCCCCCACCCCAAGCCCTGGCAACAGGTCATCTCTTG < 41bp 0.541768296061899 0.753185965287092 0.1272361 0.2749294 prediction 0.422835338450387 Functional Gain - RANGRF ENSG00000108961 CDS Human protein_coding chr17:8193133 chr17:8193136 stoploss 0.402 0 24 hm5C_associated_SNPs_123908 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:8193101-8193139
64251 chr3 127318242 127318242 1 + C T LUSC 127318241 + 127318221 127318261 41 CCTCTCACCTCCAGCCCTGGCCGAAGCTCCCGGCGTACTGA CCTCTCACCTCCAGCCCTGGCTGAAGCTCCCGGCGTACTGA < 41bp 0.575093953913808 0.786506742750381 0.2984802 0.29412565 prediction 0.422825577673147 Functional Gain - MCM2 ENSG00000073111 CDS Human protein_coding chr3:127318241 chr3:127318242 stopgain 0.762 0 22 hm5C_associated_SNPs_123910 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:127318218-127318276
64251 chr10 5498901 5498901 1 + C T UCEC 5498900 + 5498880 5498920 41 CACCAGACACAGCCCGGCATCCGAAGAGCGAGGGACAAAGC CACCAGACACAGCCCGGCATCTGAAGAGCGAGGGACAAAGC < 41bp 0.612935741821879 0.824340816541368 0.17227963 0.14877063 prediction 0.422810149438978 Functional Gain - NET1 ENSG00000173848 CDS Human protein_coding chr10:5498900 chr10:5498901 stopgain 0.029 0 22 hm5C_associated_SNPs_123915 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr10:5498887-5498912
64251 chr9 71395305 71395305 1 + C G rs35278692 71395301 + 71395281 71395321 41 CCGCCACGGCCTGCTGCTGCCGGCCTCCCCTGTCCGCATGC CCGCCACGGCCTGCTGCTGCCGGCGTCCCCTGTCCGCATGC < 41bp 0.653808607696174 0.865211768749253 0.3048644 0.89508355 prediction 0.422806322106158 Functional Gain - FAM122A ENSG00000187866 CDS Human protein_coding chr9:71395301 chr9:71395305 synonymous SNV . 0 25 hm5C_associated_SNPs_123917 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:71395289-71395312
64251 chr2 74275023 74275023 1 + C T BRCA 74275022 + 74275002 74275042 41 GCTCTGCTGTGCCCCTGCCCCCAGAACCTTCTCTTGCGCTA GCTCTGCTGTGCCCCTGCCCCTAGAACCTTCTCTTGCGCTA < 41bp 0.457995088619317 0.711388479626001 0.36444336 0.5271259 prediction 0.422776959252002 Functional Gain - TET3 ENSG00000187605 CDS Human protein_coding chr2:74275022 chr2:74275023 nonsynonymous SNV 0.940 1 22 hm5C_associated_SNPs_123923 0 0 1 GEMIN5 POSTAR2 ENCODE chr2:74274949-74275028
64251 chr17 4799092 4799092 1 + T C LGG 4799090 + 4799070 4799110 41 AAGAAGCAGGGCTGGACCACCGTGGGGGACATGGAGGGCTG AAGAAGCAGGGCTGGACCACCGCGGGGGACATGGAGGGCTG < 41bp 0.632951523322742 0.84433788610288 0.8710104 0.91174 prediction 0.422772725560276 Functional Gain - MINK1 ENSG00000141503 CDS Human protein_coding chr17:4799090 chr17:4799092 nonsynonymous SNV 0.977 4 23 hm5C_associated_SNPs_123924 0 0 8 BUD13 POSTAR2 ENCODE chr17:4799050-4799108
64251 chr7 29725036 29725036 1 - G C rs574457365 29725039 - 29725019 29725059 41 CAGCCGGGACACCTTCTTCTCCGCGTCTCCTCGTCTCCCGC CAGCCGGGACACCTTCTTCTCCGGGTCTCCTCGTCTCCCGC < 41bp 0.49018688628985 0.711381333964582 0.4545108 0.93142825 prediction 0.422762667929165 Functional Gain - DPY19L2P3;ZNRF2P2 ENSG00000227855 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:29725039 chr7:29725036 . . 0 24 hm5C_associated_SNPs_123925 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr7:29725011-29725051
64251 chr7 6441629 6441629 1 + C T SKCM 6441628 + 6441608 6441648 41 AGCTGACTCCCATCACCTATCCGCAGGGTCTAGCCATGGCT AGCTGACTCCCATCACCTATCTGCAGGGTCTAGCCATGGCT < 41bp 0.642442034458558 0.853817183560021 0.35894826 0.23508728 prediction 0.422750298202927 Functional Gain - RAC1 ENSG00000136238 CDS Human protein_coding chr7:6441628 chr7:6441629 nonsynonymous SNV 0.682 1 22 hm5C_associated_SNPs_123928 0 0 2 UCHL5 POSTAR2 ENCODE chr7:6441621-6441657
64251 chr10 103906899 103906899 1 + C T SKCM 103906898 + 103906878 103906918 41 TCCCCTGAGGCCTCACCCTGCCGGAATGACATGAACACTAG TCCCCTGAGGCCTCACCCTGCTGGAATGACATGAACACTAG < 41bp 0.62588436007826 0.837256353238124 0.11722502 0.15847519 prediction 0.422743986319728 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103906898 chr10:103906899 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_123933 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:103906864-103906958
64251 chr3 136664750 136664750 1 + T C BLCA 136664747 + 136664727 136664767 41 GAGAAATTAGCAGCAGTCGTCAATAACCTAAATACTGGGCA GAGAAATTAGCAGCAGTCGTCAACAACCTAAATACTGGGCA < 41bp 0.514391006201324 0.725753659979153 0.2945924 0.2704627 prediction 0.422725307555657 Functional Gain - NCK1 ENSG00000158092 CDS Human protein_coding chr3:136664747 chr3:136664750 synonymous SNV . 0 24 hm5C_associated_SNPs_123937 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:136664740-136664760
64251 chr6 33179065 33179065 1 + C G UCEC 33179064 + 33179044 33179084 41 GACTCCGCCCCTGACTCTGCCCCAGGCCCTGCTCCCAAGCG GACTCCGCCCCTGACTCTGCCGCAGGCCCTGCTCCCAAGCG < 41bp 0.439163552262302 0.711358050592512 0.051495463 0.06308922 prediction 0.422716101185023 Functional Gain - RING1 ENSG00000204227 CDS Human protein_coding chr6:33179064 chr6:33179065 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_123939 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr6:33179040-33179078
64251 chr2 101580628 101580628 1 + A G UCEC 101580625 + 101580605 101580645 41 CACCGTTCGTCTGGCAACACCACAATTCTTAAAGGCAAGTA CACCGTTCGTCTGGCAACACCACGATTCTTAAAGGCAAGTA < 41bp 0.596096447912745 0.807453466739814 0.12384984 0.05919382 prediction 0.422714037654137 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101580625 chr2:101580628 nonsynonymous SNV 0.599 4 24 hm5C_associated_SNPs_123940 0 0 6 BUD13 POSTAR2 ENCODE chr2:101580609-101580632
64251 chr18 2656088 2656088 1 + A G rs376002312 2656085 + 2656065 2656105 41 TTTCCCCAATATGGCAGCGGCGGACGGCGGCGGGCCTGGTG TTTCCCCAATATGGCAGCGGCGGGCGGCGGCGGGCCTGGTG < 41bp 0.572432465508495 0.783789199250633 0.76332295 0.88769567 prediction 0.422713467484276 Functional Gain - SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2656085 chr18:2656088 nonsynonymous SNV 0.844 0 24 hm5C_associated_SNPs_123941 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:2656074-2656123
64251 chr4 160280020 160280020 1 + T G rs528195865 160280016 + 160279996 160280036 41 CCCTGGCTTCCCATGTCCTTCTGGTCTCACCCGCGAAGTGC CCCTGGCTTCCCATGTCCTTCTGGGCTCACCCGCGAAGTGC < 41bp 0.529521819660804 0.740875780686951 0.14837632 0.40599135 prediction 0.422707922052295 Functional Gain - RAPGEF2 ENSG00000109756 UTR3 Human protein_coding chr4:160280016 chr4:160280020 . . 0 25 hm5C_associated_SNPs_123945 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:160279974-160280028
64251 chr17 12847434 12847434 1 + T G PRAD 12847430 + 12847410 12847450 41 TCGGGAAGCCGCTGGAGGAGCACCTCACCATCAGCGGCCGG TCGGGAAGCCGCTGGAGGAGCACCGCACCATCAGCGGCCGG < 41bp 0.532384834134654 0.743730035129989 0.23636478 0.27705505 prediction 0.422690401990669 Functional Gain - ARHGAP44 ENSG00000006740 CDS Human protein_coding chr17:12847430 chr17:12847434 nonsynonymous SNV 0.924 4 25 hm5C_associated_SNPs_123947 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:12847429-12847466
64251 chr12 101711394 101711394 1 + C T COAD 101711393 + 101711373 101711413 41 GTTGGAGGAAGAGGCAGTGCCCCAAGATGAATCCTCACAGA GTTGGAGGAAGAGGCAGTGCCTCAAGATGAATCCTCACAGA < 41bp 0.462862984443482 0.711344753117562 0.1794292 0.5819185 prediction 0.422689506235123 Functional Gain - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101711393 chr12:101711394 synonymous SNV . 0 22 hm5C_associated_SNPs_123948 0 0 6 GRWD1 POSTAR2 ENCODE chr12:101711326-101711432
64251 chr3 51738155 51738155 1 + C G rs76682441 51738154 + 51738134 51738174 41 TTCCTGAGGGACCTGACTTCCCCTGCTCCAGGCCTCTTGCT TTCCTGAGGGACCTGACTTCCGCTGCTCCAGGCCTCTTGCT < 41bp 0.412828546839724 0.711334510374463 0.3145008 0.8187836 prediction 0.422669020748927 Functional Gain - TEX264 ENSG00000164081 UTR3 Human protein_coding chr3:51738154 chr3:51738155 . . 0 22 hm5C_associated_SNPs_123952 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:51738134-51738199
64251 chr1 10041122 10041122 1 + T C UCEC 10041119 + 10041099 10041139 41 GAGAAATTGGAGGCTAGTGACTGTGATCACCAGCAGAACTC GAGAAATTGGAGGCTAGTGACTGCGATCACCAGCAGAACTC < 41bp 0.530974007503479 0.742306588074842 0.04108727 0.04820028 prediction 0.422665161142727 Functional Gain - NMNAT1 ENSG00000173614 CDS Human protein_coding chr1:10041119 chr1:10041122 synonymous SNV . 0 24 hm5C_associated_SNPs_123954 0 0 3 GRWD1 POSTAR2 ENCODE chr1:10041092-10041226
64251 chr4 39276469 39276469 1 + A G UCEC 39276466 + 39276446 39276486 41 CGTCAACTGTGATTGAGTGTCACAGGGCAGGCCTGAAGAAC CGTCAACTGTGATTGAGTGTCACGGGGCAGGCCTGAAGAAC < 41bp 0.575781944535101 0.787113215520993 0.23907673 0.2789543 prediction 0.422662541971784 Functional Gain - WDR19 ENSG00000157796 CDS Human protein_coding chr4:39276466 chr4:39276469 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_123955 0 0 2 BUD13 POSTAR2 ENCODE chr4:39276407-39276489
64251 chr17 4847922 4847922 1 + C T GBM 4847921 + 4847901 4847941 41 GGGACAAGCTGCGGGTACTCCCCTGTGCTCATGGTGAGGCC GGGACAAGCTGCGGGTACTCCTCTGTGCTCATGGTGAGGCC < 41bp 0.439272507129772 0.711329290099423 0.06350586 0.12817454 prediction 0.422658580198845 Functional Gain - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4847921 chr17:4847922 nonsynonymous SNV 0.950 4 22 hm5C_associated_SNPs_123956 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4847891-4847924
64251 chr19 11024598 11024598 1 + C T SKCM 11024597 + 11024577 11024617 41 ACGGACCGCATCGTGGTCATCCCGGGCAAGGTGGAGGAGGT ACGGACCGCATCGTGGTCATCTCGGGCAAGGTGGAGGAGGT < 41bp 0.618019377493518 0.82934816624951 0.57981247 0.6204298 prediction 0.422657577511984 Functional Gain - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024597 chr19:11024598 nonsynonymous SNV 0.839 1 22 hm5C_associated_SNPs_123957 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11024576-11024603
64251 chr3 38180165 38180165 1 + C A HNSC 38180164 + 38180144 38180184 41 TGGCAGACAATGCGACCCGACCGCGCTGAGGCTCCAGGACC TGGCAGACAATGCGACCCGACAGCGCTGAGGCTCCAGGACC < 41bp 0.604996905876333 0.816319052862438 0.075954646 0.090301484 prediction 0.42264429397221 Functional Gain - MYD88 ENSG00000172936 CDS Human protein_coding chr3:38180164 chr3:38180165 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_123960 0 0 1 DDX3X POSTAR2 ENCODE chr3:38180159-38180242
64251 chr19 10224527 10224527 1 + C T HNSC 10224526 + 10224506 10224546 41 GTCAGCGACCTGCTCTGCGCCCTGACGCTGCCCCCGCTGGC GTCAGCGACCTGCTCTGCGCCTTGACGCTGCCCCCGCTGGC < 41bp 0.566631513568274 0.777948961659333 0.09589642 0.087399095 prediction 0.422634896182117 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10224526 chr19:10224527 synonymous SNV . 0 22 hm5C_associated_SNPs_123962 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:10224477-10224553
64251 chr7 56022693 56022693 1 + C T KIRC 56022692 + 56022672 56022712 41 TTCTCAGAGCTTTACCTGTTCCACGAGCAAAGCATGTGAAA TTCTCAGAGCTTTACCTGTTCTACGAGCAAAGCATGTGAAA < 41bp 0.469692322366421 0.71131740388268 0.04015869 0.046457827 prediction 0.422634807765361 Functional Gain - MRPS17 ENSG00000239789;ENSG00000249773 CDS Human other chr7:56022692 chr7:56022693 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_123963 0 0 3 ALKBH5 POSTAR2 GSE38201,GSM936506 chr7:56022676-56022704
64251 chr10 102749514 102749514 1 + C T COAD 102749513 + 102749493 102749533 41 ATCAGCAATGTGAGACTAGCCCGGGTCATGCTGACACAGTT ATCAGCAATGTGAGACTAGCCTGGGTCATGCTGACACAGTT < 41bp 0.588834993916102 0.800151697814408 0.79899734 0.48272684 prediction 0.422633407796613 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102749513 chr10:102749514 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_123964 1 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:102749484-102749538
64251 chr3 38045762 38045762 1 + C T LUSC 38045761 + 38045741 38045781 41 GCCAGGCTCCCTGAGGAGGTCCCCAGCTTCCAGCCACGACT GCCAGGCTCCCTGAGGAGGTCTCCAGCTTCCAGCCACGACT < 41bp 0.437076779755053 0.711315770282494 0.42893535 0.9268153 prediction 0.422631540564988 Functional Gain - VILL ENSG00000136059 CDS Human protein_coding chr3:38045761 chr3:38045762 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_123966 0 0 3 BUD13 POSTAR2 ENCODE chr3:38045705-38045778
64251 chr16 1748827 1748827 1 + C T UCEC 1748826 + 1748806 1748846 41 CCACAGCTGCAAGGAGCATCCCGGCTGGAGCAGAGCCAGGT CCACAGCTGCAAGGAGCATCCTGGCTGGAGCAGAGCCAGGT < 41bp 0.580294423130461 0.791607092575753 0.6278088 0.35556325 prediction 0.422625338890583 Functional Gain - JPT2 ENSG00000206053 CDS Human protein_coding chr16:1748826 chr16:1748827 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_123968 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:1748809-1748847
64251 chr12 108104210 108104210 1 + C G UCEC 108104209 + 108104189 108104229 41 TCTTCTGTTCTTCATGTTGCCCTGATTTGCCATTTATTTAT TCTTCTGTTCTTCATGTTGCCGTGATTTGCCATTTATTTAT < 41bp 0.402274170564339 0.711309285909278 0.026089698 0.3892907 prediction 0.422618571818556 Functional Gain - PWP1 ENSG00000136045 CDS Human protein_coding chr12:108104209 chr12:108104210 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_123970 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:108104188-108104219
64251 chr17 38319029 38319029 1 + T C rs148913545 38319027 + 38319007 38319047 41 AGGATGAGGGTCGCTGGGAGCATGACAAGTTCCGGGAAGAT AGGATGAGGGTCGCTGGGAGCACGACAAGTTCCGGGAAGAT < 41bp 0.65867755521013 0.869982309616992 0.6221391 0.68453246 prediction 0.422609508813723 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38319027 chr17:38319029 synonymous SNV . 0 23 hm5C_associated_SNPs_123973 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:38318997-38319032
64251 chr3 17053544 17053544 1 + C T SKCM 17053543 + 17053523 17053563 41 TGTGAGAAAAGGGAAGAAATCCAGGGAATATGCATCTTTGA TGTGAGAAAAGGGAAGAAATCTAGGGAATATGCATCTTTGA < 41bp 0.477875311044969 0.711304011596206 0.9077272 0.7292252 prediction 0.422608023192412 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17053543 chr3:17053544 synonymous SNV . 0 22 hm5C_associated_SNPs_123975 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:17053537-17053577
64251 chr6 151152605 151152605 1 + C T rs115830521 151152604 + 151152584 151152624 41 CAGCCTGAGGCCATTTGTTTCCCAAGACAGCCTCCAGCTCA CAGCCTGAGGCCATTTGTTTCTCAAGACAGCCTCCAGCTCA < 41bp 0.437591933649002 0.711302577148455 0.08179742 0.24625546 prediction 0.422605154296909 Functional Gain - PLEKHG1 ENSG00000120278 CDS Human protein_coding chr6:151152604 chr6:151152605 synonymous SNV . 0 22 hm5C_associated_SNPs_123976 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:151152586-151152609
64251 chr14 23235926 23235926 1 + A G LUAD 23235923 + 23235903 23235943 41 CGGGCAAAATGGCGATGGGACTAATGTGCGGACGCCGGGAG CGGGCAAAATGGCGATGGGACTAGTGTGCGGACGCCGGGAG < 41bp 0.604402872626982 0.815703536075113 0.43570468 0.5598987 prediction 0.422601326896262 Functional Gain - OXA1L ENSG00000155463 CDS Human protein_coding chr14:23235923 chr14:23235926 nonsynonymous SNV 0.017 0 24 hm5C_associated_SNPs_123977 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819210 chr14:23235900-23235940
64251 chr3 50150955 50150955 1 + C T COAD 50150954 + 50150934 50150974 41 GGAAAGAGAAGAAGGAGAAACCCAAGAGCAAAACAGCCCAG GGAAAGAGAAGAAGGAGAAACTCAAGAGCAAAACAGCCCAG < 41bp 0.626860779728819 0.838158716442055 0.31456897 0.54882085 prediction 0.422595873426472 Functional Gain - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50150954 chr3:50150955 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_123978 0 0 6 DDX24 POSTAR2 ENCODE chr3:50150837-50150979
64251 chr10 30723180 30723180 1 + C G rs549089186 30723176 + 30723156 30723196 41 CGGCGCCCTGGTTCCTGCTTCTGCCGCTGCCGCCGCCGGAT CGGCGCCCTGGTTCCTGCTTCTGCGGCTGCCGCCGCCGGAT < 41bp 0.64274103331321 0.854037832456789 0.8184439 0.8787677 prediction 0.422593598287159 Functional Gain - MAP3K8 ENSG00000107968 UTR5 Human protein_coding chr10:30723176 chr10:30723180 . . 0 25 hm5C_associated_SNPs_123979 0 0 3 DDX3X POSTAR2 ENCODE chr10:30723111-30723299
64251 chr2 39893198 39893198 1 + C T COAD 39893197 + 39893177 39893217 41 GCTCGTCACGGCCATCTTCACCGACCACTGGTACGAGACCG GCTCGTCACGGCCATCTTCACTGACCACTGGTACGAGACCG < 41bp 0.53276764267192 0.744049463158817 0.11688772 0.16068292 prediction 0.422563640973793 Functional Gain - TMEM178A ENSG00000152154 CDS Human protein_coding chr2:39893197 chr2:39893198 synonymous SNV . 0 22 hm5C_associated_SNPs_123988 0 0 1 PRPF8 POSTAR2 ENCODE chr2:39893021-39893204
64251 chr3 101568488 101568488 1 + C G rs555868428 101568484 + 101568464 101568504 41 CCTGGGAGCATGATTGTGGACAAGCTGCTGGACGACAGCCG CCTGGGAGCATGATTGTGGACAAGGTGCTGGACGACAGCCG < 41bp 0.645581308462103 0.856862023329977 0.030244708 0.16511583 prediction 0.422561429735748 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101568484 chr3:101568488 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_123990 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:101568475-101568497
64251 chr17 73258940 73258940 1 + A G UCEC 73258937 + 73258917 73258957 41 ACAAAGTACTGGCCAGATCCCTCATGATTCAGGTAAACAGC ACAAAGTACTGGCCAGATCCCTCGTGATTCAGGTAAACAGC < 41bp 0.468859271690883 0.711274564015249 0.056044012 0.046189785 prediction 0.422549128030499 Functional Gain - MRPS7 ENSG00000125445 CDS Human protein_coding chr17:73258937 chr17:73258940 nonsynonymous SNV 0.516 0 24 hm5C_associated_SNPs_123995 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:73258887-73258941
64251 chr2 203242243 203242243 1 + T C STAD 203242241 + 203242221 203242261 41 CTGGCGGGTGCCCTGGCTACCATGGACCATCCTGCTGGTCA CTGGCGGGTGCCCTGGCTACCACGGACCATCCTGCTGGTCA < 41bp 0.572016462255041 0.783285154487205 0.7427785 0.7259848 prediction 0.422537384464329 Functional Gain - BMPR2 ENSG00000204217 CDS Human protein_coding chr2:203242241 chr2:203242243 nonsynonymous SNV 0.486 1 23 hm5C_associated_SNPs_123997 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:203242200-203242245
64251 chr4 129776873 129776873 1 + C T COAD 129776872 + 129776852 129776892 41 AGCCAAAATGTCTGCTGTGTCCGAAGAAGGGTGGAGCTATG AGCCAAAATGTCTGCTGTGTCTGAAGAAGGGTGGAGCTATG < 41bp 0.61800847740795 0.829272591853581 0.21476102 0.14993298 prediction 0.422528228891262 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129776872 chr4:129776873 nonsynonymous SNV 0.994 5 22 hm5C_associated_SNPs_123999 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr4:129776826-129776890
64251 chr3 12869032 12869032 1 + C A STAD 12869028 + 12869008 12869048 41 ATGTATTCACTGCTTGAGAGCTGCCTGGGCCAGCTGGATAT ATGTATTCACTGCTTGAGAGCTGCATGGGCCAGCTGGATAT < 41bp 0.283995745381241 0.711262382937207 0.1836322 0.24295157 prediction 0.422524765874415 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12869028 chr3:12869032 nonsynonymous SNV 0.993 4 25 hm5C_associated_SNPs_124000 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:12869020-12869053
64251 chr14 73538420 73538420 1 + C T COAD 73538419 + 73538399 73538439 41 TCCCACCAGGGATCCCACCCCCGCAGTTTCCAGGATTTCCT TCCCACCAGGGATCCCACCCCTGCAGTTTCCAGGATTTCCT < 41bp 0.639147517693845 0.850407387336636 0.21517721 0.33602518 prediction 0.422519739285581 Functional Gain - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73538419 chr14:73538420 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_124001 0 0 1 DDX24 POSTAR2 ENCODE chr14:73538342-73538458
64251 chr2 75101560 75101560 1 + A G UCEC 75101557 + 75101537 75101577 41 AGGAGATTGACATGGGCTCACTGAACCCGGGAAAGCAACTG AGGAGATTGACATGGGCTCACTGGACCCGGGAAAGCAACTG < 41bp 0.597467949762543 0.80872458256178 0.3161953 0.424251 prediction 0.422513265598474 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75101557 chr2:75101560 nonsynonymous SNV 0.922 5 24 hm5C_associated_SNPs_124002 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:75101545-75101566
64251 chr20 61461754 61461754 1 + C T COAD 61461753 + 61461733 61461773 41 CCTCCCGGAGCCCCTGGTGTCCGAGGCTTCCAGGTGGGTGA CCTCCCGGAGCCCCTGGTGTCTGAGGCTTCCAGGTGGGTGA < 41bp 0.547716543472283 0.758972697378914 0.9036808 0.8473871 prediction 0.422512307813262 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61461753 chr20:61461754 stopgain 0.227 1 22 hm5C_associated_SNPs_124003 0 0 3 PPIG POSTAR2 ENCODE chr20:61461747-61461762
64251 chr16 313303 313303 1 + C T BLCA 313302 + 313282 313322 41 GATGCATGTCCCAGGGAACGCCGGTGCAGATGTGCTTCTTG GATGCATGTCCCAGGGAACGCTGGTGCAGATGTGCTTCTTG < 41bp 0.481874740446756 0.71125557152956 0.28740555 0.28685552 prediction 0.42251114305912 Functional Gain - FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:313302 chr16:313303 synonymous SNV . 0 22 hm5C_associated_SNPs_124005 0 0 3 PPIG POSTAR2 ENCODE chr16:313264-313328
64251 chr15 43476690 43476690 1 + T C GBM 43476687 + 43476667 43476707 41 CCCTTTGCGGACCTGGTTGACACTGCTGACACCTGTTCTCA CCCTTTGCGGACCTGGTTGACACCGCTGACACCTGTTCTCA < 41bp 0.508508444552909 0.71976191594019 0.038229644 0.09504187 prediction 0.422506942774561 Functional Gain - TMEM62 ENSG00000137842 CDS Human protein_coding chr15:43476687 chr15:43476690 nonsynonymous SNV 0.436 1 24 hm5C_associated_SNPs_124007 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:43476670-43476695
64251 chr19 14574764 14574764 1 + C T rs139622328 14574763 + 14574743 14574783 41 CCCTGGGGCTTCTCCAGGATCCGAGGCCCGGACCACGGGGT CCCTGGGGCTTCTCCAGGATCTGAGGCCCGGACCACGGGGT < 41bp 0.471476782457309 0.71125200625504 0.9129641 0.85939896 prediction 0.422504012510081 Functional Gain - PKN1 ENSG00000123143 CDS Human protein_coding chr19:14574763 chr19:14574764 synonymous SNV . 0 22 hm5C_associated_SNPs_124008 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14574749-14574772
64251 chr3 197707271 197707271 1 + T G STAD 197707267 + 197707247 197707287 41 GCCAGACCAAGAAGGCATCTCAGATGCAGACTTTGTTCTTT GCCAGACCAAGAAGGCATCTCAGAGGCAGACTTTGTTCTTT < 41bp 0.50118248988563 0.712424686321197 0.45347145 0.90520847 prediction 0.422484392871134 Functional Gain - LMLN ENSG00000185621 CDS Human protein_coding chr3:197707267 chr3:197707271 nonsynonymous SNV 0.880 1 25 hm5C_associated_SNPs_124010 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:197707240-197707278
64251 chr17 34934525 34934525 1 + T C STAD 34934522 + 34934502 34934542 41 CTGCACTTTATGAAGGCTTGCGGTGCTGTCCACATGAACGA CTGCACTTTATGAAGGCTTGCGGCGCTGTCCACATGAACGA < 41bp 0.494799582961205 0.711237097319684 0.28615236 0.30047905 prediction 0.422474194639368 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34934522 chr17:34934525 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_124012 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr17:34934488-34934533
64251 chr12 69656301 69656301 1 + C T HNSC 69656300 + 69656280 69656320 41 GATCGTGACCGAGACCGTGACCGAGAGCGTGACCGAGAGCG GATCGTGACCGAGACCGTGACTGAGAGCGTGACCGAGAGCG < 41bp 0.464113487474691 0.711224809022732 0.045352638 0.041246742 prediction 0.422449618045464 Functional Gain - CPSF6 ENSG00000111605 CDS Human protein_coding chr12:69656300 chr12:69656301 stopgain 0.998 1 22 hm5C_associated_SNPs_124015 0 0 24 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:69656150-69656336
64251 chr8 42206559 42206559 1 + A G rs147215490 42206556 + 42206536 42206576 41 TGGAGTAGGAACAAAAATTGCTGAAAAGATTGATGAGTTTT TGGAGTAGGAACAAAAATTGCTGGAAAGATTGATGAGTTTT < 41bp 0.527591018618351 0.738815373305951 0.3575862 0.4463899 prediction 0.422448709375201 Functional Gain - POLB ENSG00000070501 CDS Human protein_coding chr8:42206556 chr8:42206559 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_124016 0 0 2 GPKOW POSTAR2 ENCODE chr8:42206514-42206559
64251 chr6 116544285 116544285 1 + C T rs370659130 116544284 + 116544264 116544304 41 TTACCAAGTCAGAGACCTTTCCGGACACTCGGTAAGTTACA TTACCAAGTCAGAGACCTTTCTGGACACTCGGTAAGTTACA < 41bp 0.604395366081747 0.815617717823511 0.8898504 0.21010414 prediction 0.422444703483529 Functional Gain - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116544284 chr6:116544285 nonsynonymous SNV 0.509 0 22 hm5C_associated_SNPs_124017 0 0 1 IGF2BP1 POSTAR2 ENCODE chr6:116544254-116544295
64251 chr2 172952973 172952973 1 + C T SKCM 172952972 + 172952952 172952992 41 CCAAGAAGCTATGCAGCAACCCCAACTTATGTGAGGTTGCC CCAAGAAGCTATGCAGCAACCTCAACTTATGTGAGGTTGCC < 41bp 0.455318361758279 0.711221911273638 0.07845783 0.15889484 prediction 0.422443822547275 Functional Gain - DLX1 ENSG00000144355 CDS Human protein_coding chr2:172952972 chr2:172952973 synonymous SNV . 0 22 hm5C_associated_SNPs_124019 0 0 1 RBM15 POSTAR2 GSE78030,GSM2064710 chr2:172952960-172952980
64251 chr21 47552166 47552166 1 + C A LUSC 47552162 + 47552142 47552182 41 CTCCTTCTCGCACGTGGGCGCAGGCGTGGTGCACGCCATCA CTCCTTCTCGCACGTGGGCGCAGGAGTGGTGCACGCCATCA < 41bp 0.709865780756479 0.921079512127164 0.8762308 0.90263224 prediction 0.42242746274137 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552162 chr21:47552166 synonymous SNV . 0 25 hm5C_associated_SNPs_124022 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:47552151-47552178
64251 chr3 141499527 141499527 1 + T C STAD 141499525 + 141499505 141499545 41 CCTGTGGGATGCTGCACCTCCATGAACTCGGCATCGTCTAT CCTGTGGGATGCTGCACCTCCACGAACTCGGCATCGTCTAT < 41bp 0.656966402220588 0.868176982697661 0.1341885 0.121916324 prediction 0.422421160954147 Functional Gain - GRK7 ENSG00000114124 CDS Human protein_coding chr3:141499525 chr3:141499527 synonymous SNV . 0 23 hm5C_associated_SNPs_124023 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:141499518-141499533
64251 chr7 142997061 142997061 1 + C T UCEC 142997060 + 142997040 142997080 41 TTTGCACAGTTACCTGCACACCGAGTCACGGACTCCTGCAT TTTGCACAGTTACCTGCACACTGAGTCACGGACTCCTGCAT < 41bp 0.44846064387089 0.711208650706794 0.28750306 0.18002355 prediction 0.422417301413589 Functional Gain - CASP2 ENSG00000106144 CDS Human protein_coding chr7:142997060 chr7:142997061 stopgain 0.697 0 22 hm5C_associated_SNPs_124024 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:142997026-142997076
64251 chr9 37080468 37080468 1 + C A rs576514717 37080464 + 37080444 37080484 41 TCTGCTGTCAGAAGCAGCAGCTGCCGCCGTGGAATCCAAAA TCTGCTGTCAGAAGCAGCAGCTGCAGCCGTGGAATCCAAAA < 41bp 0.339964974880089 0.711200632577594 0.26212865 0.4938228 prediction 0.422401265155188 Functional Gain - EBLN3P ENSG00000233137 ncRNA_exonic Human other chr9:37080464 chr9:37080468 . . 0 25 hm5C_associated_SNPs_124026 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr9:37080461-37080480
64251 chr5 177035597 177035597 1 + C T CESC 177035596 + 177035576 177035616 41 CGCGAGGACGACGAGTTCTACCGGCGCATTAAGGGAGCTGG CGCGAGGACGACGAGTTCTACTGGCGCATTAAGGGAGCTGG < 41bp 0.570670664064895 0.7818667419125 0.90996087 0.886492 prediction 0.422392155695211 Functional Gain - B4GALT7 ENSG00000027847 CDS Human protein_coding chr5:177035596 chr5:177035597 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_124028 0 0 1 PRPF8 POSTAR2 ENCODE chr5:177035561-177035667
64251 chr11 118253321 118253321 1 + T C COAD 118253319 + 118253299 118253339 41 TGCAGAATGAAGAATCCCCACCTGAGGGCCAAACTAGCAGA TGCAGAATGAAGAATCCCCACCCGAGGGCCAAACTAGCAGA < 41bp 0.41121831874157 0.711188780133793 0.12544212 0.09550199 prediction 0.422377560267587 Functional Gain - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118253319 chr11:118253321 nonsynonymous SNV 0.957 4 23 hm5C_associated_SNPs_124032 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003588 chr11:118253313-118253334
64251 chr20 43565288 43565288 1 + C T UCEC 43565287 + 43565267 43565307 41 GCACCATGCAGGTCCAGGAGCCGGCTGTGCACATCCCAGGA GCACCATGCAGGTCCAGGAGCTGGCTGTGCACATCCCAGGA < 41bp 0.465397970210264 0.71117049195516 0.5311584 0.23942503 prediction 0.422340983910319 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43565287 chr20:43565288 nonsynonymous SNV 0.508 1 22 hm5C_associated_SNPs_124036 0 0 5 BUD13 POSTAR2 ENCODE chr20:43565280-43565371
64251 chr20 31601629 31601629 1 + C T STAD 31601628 + 31601608 31601648 41 CCCTACAGCGCCCCAGAGCCCCTGGAGCTGACGCTGCCTGT CCCTACAGCGCCCCAGAGCCCTTGGAGCTGACGCTGCCTGT < 41bp 0.474901978980247 0.711166702297483 0.36829257 0.3250123 prediction 0.422333404594966 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31601628 chr20:31601629 synonymous SNV . 0 22 hm5C_associated_SNPs_124039 0 0 1 PPIG POSTAR2 ENCODE chr20:31601617-31601645
64251 chr10 79814319 79814319 1 + T A rs72642283 79814317 + 79814297 79814337 41 ATTGGGGCTTGGAGTGCAAGCATTGGGAAGAATTTCCCAGG ATTGGGGCTTGGAGTGCAAGCAATGGGAAGAATTTCCCAGG < 41bp 0.502012521135496 0.713176761552189 0.16336828 0.4514341 prediction 0.422328480833387 Functional Gain - RPS24 ENSG00000138326 CDS Human protein_coding chr10:79814317 chr10:79814319 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_124040 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:79814314-79814341
64251 chr7 92086432 92086432 1 + C T rs564412708 92086431 + 92086411 92086451 41 TGTAGTGAGCCAAGATTGCACCGCTGTGCTCCAGCCTGGGC TGTAGTGAGCCAAGATTGCACTGCTGTGCTCCAGCCTGGGC < 41bp 0.509371464261756 0.720534745449517 0.122716635 0.16480955 prediction 0.422326562375522 Functional Gain - GATAD1 ENSG00000157259 UTR3 Human protein_coding chr7:92086431 chr7:92086432 . . 0 22 hm5C_associated_SNPs_124041 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221659 chr7:92086420-92086440
64251 chrX 153667183 153667183 1 + C T SKCM 153667182 + 153667162 153667202 41 GGCCGAGACTGGAATGTTGACCTGATTCCCAAATTCCTCAT GGCCGAGACTGGAATGTTGACTTGATTCCCAAATTCCTCAT < 41bp 0.618430061163388 0.829590113830361 0.14776188 0.08624691 prediction 0.422320105333947 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153667182 chrX:153667183 synonymous SNV . 0 22 hm5C_associated_SNPs_124043 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chrX:153667149-153667200
64251 chr6 43111167 43111167 1 + C T UCEC 43111166 + 43111146 43111186 41 GTCTCTCAGACAAGCCTGTGCCGGAGGAGTCGGAGGGCCCT GTCTCTCAGACAAGCCTGTGCTGGAGGAGTCGGAGGGCCCT < 41bp 0.593120383109926 0.804279455456095 0.9122696 0.5034193 prediction 0.422318144692338 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43111166 chr6:43111167 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_124044 0 0 2 SF3A3 POSTAR2 ENCODE chr6:43111108-43111189
64251 chr17 73015831 73015831 1 + C T SKCM 73015830 + 73015810 73015850 41 CTTATTGTCGGAGTAGTGGTCCTGGGGGGCAGAATGTGAAC CTTATTGTCGGAGTAGTGGTCTTGGGGGGCAGAATGTGAAC < 41bp 0.458945532388161 0.711158188134877 0.36803567 0.549311 prediction 0.422316376269754 Functional Gain - MRPL58 ENSG00000167862 CDS Human protein_coding chr17:73015830 chr17:73015831 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124045 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:73015811-73015840
64251 chr7 156756646 156756646 1 + A G rs10267297 156756643 + 156756623 156756663 41 GCCCGGAAGCAGAGGATGAACACAGACATCCGGAGAAACAT GCCCGGAAGCAGAGGATGAACACGGACATCCGGAGAAACAT < 41bp 0.545480960384806 0.756638573296512 0.4348202 0.54399735 prediction 0.422315225823411 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156756643 chr7:156756646 synonymous SNV . 0 24 hm5C_associated_SNPs_124046 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:156756606-156756703
64251 chr1 227172992 227172992 1 + T C rs199724504 227172989 + 227172969 227173009 41 TGCCGACAGGGACAGGGAGACTGTGCGGGCGAAATCCATAG TGCCGACAGGGACAGGGAGACTGCGCGGGCGAAATCCATAG < 41bp 0.483327698712529 0.711154367552094 0.8796301 0.8948674 prediction 0.422308735104189 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227172989 chr1:227172992 nonsynonymous SNV 0.214 2 24 hm5C_associated_SNPs_124048 0 0 3 PPIG POSTAR2 ENCODE chr1:227172955-227173008
64251 chr11 64855433 64855433 1 + C T SKCM 64855432 + 64855412 64855452 41 GTCTCGGAAGCGGCCGCTGACCCTGCTCCAGCGGGCGGGGC GTCTCGGAAGCGGCCGCTGACTCTGCTCCAGCGGGCGGGGC < 41bp 0.605318249190535 0.816470367431164 0.77374405 0.38721594 prediction 0.422304236481257 Functional Gain - ZFPL1 ENSG00000162300 CDS Human protein_coding chr11:64855432 chr11:64855433 synonymous SNV . 0 22 hm5C_associated_SNPs_124049 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr11:64855430-64855472
64251 chr16 88873800 88873800 1 + A G SKCM 88873797 + 88873777 88873817 41 CTGAGCTGGCCCGCGTGCTGCGGAGCGTCTTTGTGTCCGAA CTGAGCTGGCCCGCGTGCTGCGGGGCGTCTTTGTGTCCGAA < 41bp 0.608455326046772 0.819599988303419 0.8635584 0.90670955 prediction 0.422289324513293 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873797 chr16:88873800 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_124050 0 0 6 DICER1 POSTAR2 GSE55333,GSM1334287 chr16:88873800-88873819
64251 chr6 3015773 3015773 1 + T C COAD 3015770 + 3015750 3015790 41 GTTGCCGCCCACAGTTCCCGCTGTACTGGTTCAGCGTGCCA GTTGCCGCCCACAGTTCCCGCTGCACTGGTTCAGCGTGCCA < 41bp 0.549894567955359 0.761034335200342 0.07532942 0.036231726 prediction 0.422279534489965 Functional Gain - NQO2 ENSG00000124588 CDS Human protein_coding chr6:3015770 chr6:3015773 nonsynonymous SNV 0.836 2 24 hm5C_associated_SNPs_124053 0 0 1 LIN28B POSTAR2 ENCODE chr6:3015762-3015836
64251 chr6 161505604 161505604 1 + A G COAD 161505601 + 161505581 161505621 41 TGGCTTACAGGAGAGCTGTGCTGAATTTTGGACTAGTGCGG TGGCTTACAGGAGAGCTGTGCTGGATTTTGGACTAGTGCGG < 41bp 0.462678268647079 0.711129723857198 0.23505935 0.53809196 prediction 0.422259447714395 Functional Gain - MAP3K4 ENSG00000085511 CDS Human protein_coding chr6:161505601 chr6:161505604 nonsynonymous SNV 0.968 4 24 hm5C_associated_SNPs_124058 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:161505567-161505605
64251 chr11 33127159 33127159 1 - A G UCEC 33127162 - 33127142 33127182 41 TCAACGAGGTTGTGTTAATCCGATGATCAACATTGAACAGC TCAACGAGGTTGTGTTAATCCGACGATCAACATTGAACAGC < 41bp 0.528079472160728 0.739205422045496 0.2732306 0.1501418 prediction 0.422251899769536 Functional Gain - CSTF3 ENSG00000176102;ENSG00000176148 CDS Human other chr11:33127162 chr11:33127159 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_124059 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr11:33127147-33127164
64251 chr12 112451286 112451286 1 + C T BLCA 112451285 + 112451265 112451305 41 GCGATATGGCTGCCGCTGTGCCCCGCGCCGCATTTCTCTCC GCGATATGGCTGCCGCTGTGCTCCGCGCCGCATTTCTCTCC < 41bp 0.542677177567429 0.753800828710793 0.20697144 0.46172002 prediction 0.422247302286729 Functional Gain - ERP29 ENSG00000089248 CDS Human protein_coding chr12:112451285 chr12:112451286 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_124060 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:112451260-112451300
64251 chr1 229772214 229772214 1 + T C LUSC 229772211 + 229772191 229772231 41 TACACTTGGGCCCAGGTGGACGCTATGTTCAGTTTGAACTG TACACTTGGGCCCAGGTGGACGCCATGTTCAGTTTGAACTG < 41bp 0.548132915765106 0.75925230815083 0.09748545 0.5491699 prediction 0.422238784771448 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229772211 chr1:229772214 synonymous SNV . 0 24 hm5C_associated_SNPs_124063 0 0 6 FMR1 POSTAR2 GSE39682,GSM977616 chr1:229772148-229772217
64251 chr19 8550627 8550627 1 + C T SKCM 8550626 + 8550606 8550646 41 TCCGAGATCGAGCGCATGGGCCTGGTCATGGACCGCATGGG TCCGAGATCGAGCGCATGGGCTTGGTCATGGACCGCATGGG < 41bp 0.586521377647474 0.797630513545274 0.10503474 0.09034774 prediction 0.422218271795599 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550626 chr19:8550627 synonymous SNV . 0 22 hm5C_associated_SNPs_124065 0 0 26 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:8550623-8550651
64251 chr1 35873657 35873657 1 + A G PAAD 35873654 + 35873634 35873674 41 CATTCTGTCCTGCACTTTTGCTGAGTTGAGTTTGGGCTTAT CATTCTGTCCTGCACTTTTGCTGGGTTGAGTTTGGGCTTAT < 41bp 0.57322760337952 0.784318695176699 0.33515185 0.81440544 prediction 0.42218218359436 Functional Gain - ZMYM4 ENSG00000146463 CDS Human protein_coding chr1:35873654 chr1:35873657 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_124074 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:35873652-35873670
64251 chr1 156761540 156761540 1 + C A rs17850664 156761536 + 156761516 156761556 41 GCACAGGACCCGGCCCTGGTCCCCCCCCAGGAAATTGCCCC GCACAGGACCCGGCCCTGGTCCCCACCCAGGAAATTGCCCC < 41bp 0.276748708686144 0.711090744882477 0.037297398 0.030768394 prediction 0.422181489764954 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156761536 chr1:156761540 nonsynonymous SNV 0.971 0 25 hm5C_associated_SNPs_124075 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:156761519-156761543
64251 chr8 90937290 90937290 1 + T C STAD 90937287 + 90937267 90937307 41 TCAAACAGCTTCCCAAAAAGCTGTATCCTGAATATCATAAA TCAAACAGCTTCCCAAAAAGCTGCATCCTGAATATCATAAA < 41bp 0.53365279413868 0.744731974053791 0.10361156 0.097385734 prediction 0.422158359830223 Functional Gain - OSGIN2 ENSG00000164823 CDS Human protein_coding chr8:90937287 chr8:90937290 nonsynonymous SNV 0.985 4 24 hm5C_associated_SNPs_124078 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr8:90937258-90937290
64251 chr10 103190180 103190180 1 + C T LUAD 103190179 + 103190159 103190199 41 TCGCTGCGATGCCTGTATAACCCAGGGACTGGCGCACTCAC TCGCTGCGATGCCTGTATAACTCAGGGACTGGCGCACTCAC < 41bp 0.443881976071626 0.711074442775564 0.1635991 0.14579713 prediction 0.422148885551127 Functional Gain - BTRC ENSG00000166167 CDS Human protein_coding chr10:103190179 chr10:103190180 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124082 0 0 3 PTBP1 POSTAR2 GSE19323,GSM480477 chr10:103190180-103190200
64251 chr11 85366750 85366750 1 + C G HNSC 85366749 + 85366729 85366769 41 TGTAAATGGTGGTCTAGCAGCCAGGTAGGAAATAAAAAACT TGTAAATGGTGGTCTAGCAGCGAGGTAGGAAATAAAAAACT < 41bp 0.415151343765823 0.711066236308854 0.576353 0.6710043 prediction 0.422132472617708 Functional Gain - TMEM126A ENSG00000171202 CDS Human protein_coding chr11:85366749 chr11:85366750 synonymous SNV . 0 22 hm5C_associated_SNPs_124087 0 0 1 LARP4 POSTAR2 ENCODE chr11:85366670-85366753
64251 chr2 10136015 10136015 1 + T C LIHC 10136013 + 10135993 10136033 41 TTGGATCACTGCAGCTCTGTCTTGAAAAGGGGGCCGTACGG TTGGATCACTGCAGCTCTGTCTCGAAAAGGGGGCCGTACGG < 41bp 0.669483549985142 0.880547632779887 0.60538465 0.9252299 prediction 0.422128165589491 Functional Gain - GRHL1 ENSG00000134317 CDS Human protein_coding chr2:10136013 chr2:10136015 stoploss 0.620 1 23 hm5C_associated_SNPs_124089 0 0 1 SF3A3 POSTAR2 ENCODE chr2:10135970-10136022
64251 chrX 151908922 151908922 1 + C A rs112731911 151908921 + 151908901 151908941 41 CCAACAACCACCCATCAACACCAAAGAGGCGAGGAAGGGGA CCAACAACCACCCATCAACACAAAAGAGGCGAGGAAGGGGA < 41bp 0.633244493126431 0.844272731177978 0.038795054 0.13164532 prediction 0.422056476103093 Functional Gain - CSAG1 ENSG00000198930 CDS Human protein_coding chrX:151908921 chrX:151908922 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_124102 0 0 2 YBX3 POSTAR2 ENCODE chrX:151908915-151908932
64251 chr8 66619297 66619297 1 + C A STAD 66619296 + 66619276 66619316 41 ACCACCACACCCTCCACCTCCCCCACCGCCCCTGCCTCCCC ACCACCACACCCTCCACCTCCACCACCGCCCCTGCCTCCCC < 41bp 0.614926577079883 0.825938542572555 0.015658796 0.13451603 prediction 0.422023930985345 Functional Gain - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66619296 chr8:66619297 synonymous SNV . 0 22 hm5C_associated_SNPs_124111 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr8:66619270-66619303
64251 chr19 17430905 17430905 1 + C A rs188312371 17430904 + 17430884 17430924 41 CAGCCGAGTGGCCTTCTCCCCCCCAACACCGGTCCAGGCCA CAGCCGAGTGGCCTTCTCCCCACCAACACCGGTCCAGGCCA < 41bp 0.625248493387632 0.836252088304862 0.77202207 0.30690032 prediction 0.42200718983446 Functional Gain - DDA1 ENSG00000130311 UTR3 Human protein_coding chr19:17430904 chr19:17430905 . . 0 22 hm5C_associated_SNPs_124115 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:17430868-17430913
64251 chr11 7437333 7437333 1 + C A HNSC 7437329 + 7437309 7437349 41 TGCTATCTTCCAACGGCTGGCAGGCTGACCATTACCATTAT TGCTATCTTCCAACGGCTGGCAGGATGACCATTACCATTAT < 41bp 0.295891598376557 0.71100255522478 0.3084402 0.4675255 prediction 0.42200511044956 Functional Gain - SYT9 ENSG00000170743 CDS Human protein_coding chr11:7437329 chr11:7437333 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_124116 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr11:7437320-7437342
64251 chr15 89172561 89172561 1 + C A UCEC 89172557 + 89172537 89172577 41 TCGGAGCCAGACCCGGGATACGACCTATGTCCCAAACTTCC TCGGAGCCAGACCCGGGATACGACATATGTCCCAAACTTCC < 41bp 0.282918385121543 0.711000913663692 0.07125834 0.14039126 prediction 0.422001827327384 Functional Gain - AEN ENSG00000181026 CDS Human protein_coding chr15:89172557 chr15:89172561 synonymous SNV . 0 25 hm5C_associated_SNPs_124120 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:89172560-89172580
64251 chr12 102542105 102542105 1 + T C UCEC 102542103 + 102542083 102542123 41 TTACCAGTTGAAAACATGGACGTGACTGACCATTATGAGGA TTACCAGTTGAAAACATGGACGCGACTGACCATTATGAGGA < 41bp 0.431647520557695 0.710990651342257 0.25715423 0.14536634 prediction 0.421981302684514 Functional Gain - PARPBP ENSG00000185480 CDS Human protein_coding chr12:102542103 chr12:102542105 nonsynonymous SNV 0.154 0 23 hm5C_associated_SNPs_124125 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102542075-102542123
64251 chr15 40498569 40498569 1 + C T COAD 40498568 + 40498548 40498588 41 CTGATCCTGAGAGACTGTTACCGGAAGAAGATCTAGATGTA CTGATCCTGAGAGACTGTTACTGGAAGAAGATCTAGATGTA < 41bp 0.625392236689368 0.836371945682162 0.8975105 0.88721514 prediction 0.421959417985588 Functional Gain - BUB1B ENSG00000156970 CDS Human protein_coding chr15:40498568 chr15:40498569 nonsynonymous SNV 0.601 0 22 hm5C_associated_SNPs_124127 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:40498545-40498643
64251 chr5 176868795 176868795 1 + C A SARC 176868794 + 176868774 176868814 41 CTCCCCACCCGCCTCTAGCCCCCAGCCCGAGGCCCCCACCA CTCCCCACCCGCCTCTAGCCCACAGCCCGAGGCCCCCACCA < 41bp 0.461821008101483 0.710977399743814 0.19163409 0.08765003 prediction 0.421954799487629 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176868794 chr5:176868795 synonymous SNV . 0 22 hm5C_associated_SNPs_124129 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr5:176868761-176868798
64251 chr11 111754522 111754522 1 + C G LUAD 111754521 + 111754501 111754541 41 AGCGAGAGCCTCACTGGTTCCCAGGACATCAACCTGAACTG AGCGAGAGCCTCACTGGTTCCGAGGACATCAACCTGAACTG < 41bp 0.678691006447147 0.889659861421148 0.4754359 0.44513285 prediction 0.421937709948002 Functional Gain - C11orf1 ENSG00000137720 CDS Human protein_coding chr11:111754521 chr11:111754522 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_124132 0 0 2 IGF2BP1 POSTAR2 ENCODE chr11:111754494-111754562
64251 chr1 228646009 228646009 1 + T G CHOL 228646007 + 228645987 228646027 41 ACCGGCATCTCGTCCAAGGCCATGGGCATCATGAACTCCTT ACCGGCATCTCGTCCAAGGCCAGGGGCATCATGAACTCCTT < 41bp 0.701726003607698 0.912693812190315 0.26108742 0.8633436 prediction 0.421935617165235 Functional Gain - HIST3H2BB ENSG00000196890 CDS Human protein_coding chr1:228646007 chr1:228646009 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_124133 0 0 3 METAP2 POSTAR2 ENCODE chr1:228646009-228646124
64251 chr5 177020677 177020677 1 + C T UCEC 177020676 + 177020656 177020696 41 CCTGGCCCGGCAGTATGGCTCCGAGGGCAGGTTCACTTTCA CCTGGCCCGGCAGTATGGCTCTGAGGGCAGGTTCACTTTCA < 41bp 0.594346146573591 0.805310274562067 0.91198206 0.5695803 prediction 0.421928255976952 Functional Gain - TMED9 ENSG00000184840 CDS Human protein_coding chr5:177020676 chr5:177020677 synonymous SNV . 0 22 hm5C_associated_SNPs_124134 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:177020648-177020703
64251 chr3 38565753 38565753 1 + A G rs146039478 38565750 + 38565730 38565770 41 CATGGAAAACTTGAAGAATGCAGAGATTGAACCAGATGATT CATGGAAAACTTGAAGAATGCAGGGATTGAACCAGATGATT < 41bp 0.553616634277525 0.764563639531267 0.34596664 0.55946004 prediction 0.421894010507484 Functional Gain - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565750 chr3:38565753 nonsynonymous SNV 0.295 0 24 hm5C_associated_SNPs_124138 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr3:38565678-38565837
64251 chr1 196654310 196654310 1 + C T UCEC 196654309 + 196654289 196654329 41 AATGGTTTTTATCCTGCAACCCGGGGAAATACAGCAAAATG AATGGTTTTTATCCTGCAACCTGGGGAAATACAGCAAAATG < 41bp 0.584455570380286 0.795399782353625 0.34788108 0.07216188 prediction 0.421888423946679 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196654309 chr1:196654310 nonsynonymous SNV 0.000 3 22 hm5C_associated_SNPs_124140 0 0 2 SND1 POSTAR2 ENCODE chr1:196654283-196654353
64251 chr3 195959296 195959296 1 + C A LUAD 195959295 + 195959275 195959315 41 TTTTATGTTCCGCAGGTTCTCCTCATCCTGACTGCCCTACA TTTTATGTTCCGCAGGTTCTCATCATCCTGACTGCCCTACA < 41bp 0.449469090412673 0.710942458111824 0.22266892 0.39051956 prediction 0.421884916223648 Functional Gain - SLC51A ENSG00000163959 CDS Human protein_coding chr3:195959295 chr3:195959296 nonsynonymous SNV 0.287 1 22 hm5C_associated_SNPs_124141 0 0 1 RBM15 POSTAR2 ENCODE chr3:195959286-195959318
64251 chr1 206653431 206653431 1 + A G UCEC 206653428 + 206653408 206653448 41 CCCTGCTGGATGGGCAGGAGCTAATGTTTCGGGGGCTGCAC CCCTGCTGGATGGGCAGGAGCTAGTGTTTCGGGGGCTGCAC < 41bp 0.448557438571862 0.71093786738203 0.6075561 0.47872767 prediction 0.421875734764061 Functional Gain - IKBKE ENSG00000143466 CDS Human other chr1:206653428 chr1:206653431 nonsynonymous SNV 0.892 1 24 hm5C_associated_SNPs_124143 0 0 1 PPIG POSTAR2 ENCODE chr1:206653428-206653453
64251 chr12 4662210 4662210 1 + T C rs17850028 4662207 + 4662187 4662227 41 GAGGATAATGACGAAGACTTCTCTATGAGAAAAAGTAAAGT GAGGATAATGACGAAGACTTCTCCATGAGAAAAAGTAAAGT < 41bp 0.474864401869864 0.71092162804025 0.89450324 0.9392897 prediction 0.421843256080499 Functional Gain - RAD51AP1 ENSG00000111247 CDS Human protein_coding chr12:4662207 chr12:4662210 synonymous SNV . 0 24 hm5C_associated_SNPs_124152 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr12:4662134-4662223
64251 chr10 12292479 12292479 1 + C A rs138917849 12292478 + 12292458 12292498 41 TTTATATTCATGTACATTCACCTGGGGAAAAAAACGGAGGG TTTATATTCATGTACATTCACATGGGGAAAAAAACGGAGGG < 41bp 0.61009707134904 0.821014098106698 0.33081824 0.4877069 prediction 0.421834053515317 Functional Gain - CDC123 ENSG00000151465 UTR3 Human protein_coding chr10:12292478 chr10:12292479 . . 0 22 hm5C_associated_SNPs_124154 0 0 29 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:12292469-12292493
64251 chr16 72142153 72142153 1 + C T COAD 72142152 + 72142132 72142172 41 GAGGAGGAGAGTGATCAAATCCGGGAGAAGTTCGCTGTTCC GAGGAGGAGAGTGATCAAATCTGGGAGAAGTTCGCTGTTCC < 41bp 0.602462518822244 0.813376357410506 0.9306321 0.91308725 prediction 0.421827677176525 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142152 chr16:72142153 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124155 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:72142144-72142177
64251 chr21 45876592 45876592 1 + T C UCEC 45876590 + 45876570 45876610 41 TCCACCCGGGAGTCTTGTCTCTTCCTCCTCTTCTGCCTGCA TCCACCCGGGAGTCTTGTCTCTCCCTCCTCTTCTGCCTGCA < 41bp 0.459188852829079 0.710913738310426 0.2725144 0.34315193 prediction 0.421827476620851 Functional Gain - LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876590 chr21:45876592 nonsynonymous SNV 0.612 0 23 hm5C_associated_SNPs_124156 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr21:45876586-45876608
64251 chrX 47041620 47041620 1 + T C UCEC 47041617 + 47041597 47041637 41 TGGGATGGGGAGAGGCGGACCTATGTTCCCGCCCTGGAGCA TGGGATGGGGAGAGGCGGACCTACGTTCCCGCCCTGGAGCA < 41bp 0.490852567244731 0.710912503185302 0.23151022 0.292899 prediction 0.421825006370605 Functional Gain - RBM10 ENSG00000182872 CDS Human protein_coding chrX:47041617 chrX:47041620 synonymous SNV . 0 24 hm5C_associated_SNPs_124158 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:47041617-47041651
64251 chr19 11141426 11141426 1 + C T BLCA 11141425 + 11141405 11141445 41 GGAACCACGAAGGCGGAGGACCGGGGCATGCTGCTGAAAAC GGAACCACGAAGGCGGAGGACTGGGGCATGCTGCTGAAAAC < 41bp 0.471762444587924 0.710895382860928 0.90318 0.88513845 prediction 0.421790765721856 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11141425 chr19:11141426 nonsynonymous SNV 0.992 5 22 hm5C_associated_SNPs_124166 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11141423-11141437
64251 chr1 110169802 110169802 1 + C T SKCM 110169801 + 110169781 110169821 41 CTCCTCACCCCTGCAGATGCCCCGGTGCACCCCCCTGCGCT CTCCTCACCCCTGCAGATGCCTCGGTGCACCCCCCTGCGCT < 41bp 0.609684289457383 0.820573480064411 0.19694966 0.27060914 prediction 0.421778381214055 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110169801 chr1:110169802 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_124168 0 0 16 BUD13 POSTAR2 ENCODE chr1:110169735-110169831
64251 chr3 152880648 152880648 1 + C T LUAD 152880647 + 152880627 152880667 41 TCGCCGTCGGTGCTGGAGATCCTGGATACGGCGGGCACCGA TCGCCGTCGGTGCTGGAGATCTTGGATACGGCGGGCACCGA < 41bp 0.542368381901469 0.753255584457253 0.5579249 0.17170423 prediction 0.421774405111569 Functional Gain - RAP2B ENSG00000181467 CDS Human protein_coding chr3:152880647 chr3:152880648 synonymous SNV . 0 22 hm5C_associated_SNPs_124169 0 0 3 U2AF2 POSTAR2 GSE61603,GSM1509288 chr3:152880640-152880660
64251 chr17 80693613 80693613 1 + A G rs368552367 80693610 + 80693590 80693630 41 CGAGGGCCGAGCCTACGACACGGACGCAGGCCCAGTGTTCG CGAGGGCCGAGCCTACGACACGGGCGCAGGCCCAGTGTTCG < 41bp 0.591705345211304 0.802591829022334 0.27209067 0.7907443 prediction 0.421772967622061 Functional Gain - FN3K ENSG00000167363 CDS Human protein_coding chr17:80693610 chr17:80693613 nonsynonymous SNV 0.243 4 24 hm5C_associated_SNPs_124170 0 0 5 DDX3X POSTAR2 ENCODE chr17:80693467-80693627
64251 chr16 2577964 2577964 1 + C A UCEC 2577963 + 2577943 2577983 41 AGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCC AGTGATCCGGGCGCTGACGGCACGTGGCATCTGCGTGTCCC < 41bp 0.440707459031066 0.710884201693675 0.44921976 0.8360585 prediction 0.421768403387349 Functional Gain - AMDHD2 ENSG00000162066 CDS Human protein_coding chr16:2577963 chr16:2577964 synonymous SNV . 0 22 hm5C_associated_SNPs_124172 0 0 2 PPIG POSTAR2 ENCODE chr16:2577962-2577985
64251 chr10 5498223 5498223 1 + T C rs77152706 5498220 + 5498200 5498240 41 GGCTCCTTTCGAGGAGCTTTCAGTAACTCAGAGAAAGGTAA GGCTCCTTTCGAGGAGCTTTCAGCAACTCAGAGAAAGGTAA < 41bp 0.530357151539928 0.741235134702759 0.16927484 0.33463353 prediction 0.421755966325662 Functional Gain - NET1 ENSG00000173848 CDS Human protein_coding chr10:5498220 chr10:5498223 synonymous SNV . 0 24 hm5C_associated_SNPs_124174 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:5498183-5498230
64251 chr7 6441557 6441557 1 + A G HNSC 6441554 + 6441534 6441574 41 TCCCATCATCCTAGTGGGAACTAAACTTGATCTTAGGGATG TCCCATCATCCTAGTGGGAACTAGACTTGATCTTAGGGATG < 41bp 0.467637823746293 0.710872597874721 0.07576692 0.11774802 prediction 0.421745195749443 Functional Gain - RAC1 ENSG00000136238 CDS Human protein_coding chr7:6441554 chr7:6441557 nonsynonymous SNV 0.999 5 24 hm5C_associated_SNPs_124177 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr7:6441553-6441592
64251 chr7 134632364 134632364 1 + C T UCEC 134632363 + 134632343 134632383 41 TCGTCGTCGTCGCGGGGAGACCGAGAGCGAAGAGTTCGAGA TCGTCGTCGTCGCGGGGAGACTGAGAGCGAAGAGTTCGAGA < 41bp 0.46619598000099 0.710870862142783 0.55230933 0.6984769 prediction 0.421741724285565 Functional Gain - CALD1 ENSG00000122786 CDS Human protein_coding chr7:134632363 chr7:134632364 synonymous SNV . 0 22 hm5C_associated_SNPs_124178 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:134632363-134632364
64251 chr17 37077372 37077372 1 + C G rs570621856 37077371 + 37077351 37077391 41 GTCACACTGGTGCTGAGTGACCGGGGGCTGCTGGGCGTCTG GTCACACTGGTGCTGAGTGACGGGGGGCTGCTGGGCGTCTG < 41bp 0.653400360888959 0.864269889418343 0.89725655 0.92528546 prediction 0.421739057058767 Functional Gain - LASP1 ENSG00000265784 ncRNA_intronic Human antisense chr17:37077371 chr17:37077372 . . 0 22 hm5C_associated_SNPs_124179 0 0 19 TARDBP POSTAR2 DRA001158,DRS012387 chr17:37077289-37077383
64251 chr16 5127460 5127460 1 + T G rs112668461 5127458 + 5127438 5127478 41 CTTTTCAGGTACGAGAAGTTCTTTGGGCGCCTGTCCCACCT CTTTTCAGGTACGAGAAGTTCTGTGGGCGCCTGTCCCACCT < 41bp 0.351645185979249 0.710867111314994 0.32364368 0.46733117 prediction 0.421734222629988 Functional Gain - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5127458 chr16:5127460 nonsynonymous SNV 0.561 1 23 hm5C_associated_SNPs_124182 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:5127453-5127479
64251 chr5 10262653 10262653 1 + C A GBM 10262652 + 10262632 10262672 41 TGTGTCATCCGGAACCTCATCCGCGATAATCGTGTGGTGTA TGTGTCATCCGGAACCTCATCAGCGATAATCGTGTGGTGTA < 41bp 0.624133987519102 0.834994289440623 0.34301177 0.36242777 prediction 0.421720603843041 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10262652 chr5:10262653 nonsynonymous SNV 0.972 2 22 hm5C_associated_SNPs_124183 0 0 31 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:10262603-10262659
64251 chr11 30358265 30358265 1 + C T CESC 30358264 + 30358244 30358284 41 ACCAAGTGTGGAGCTGAATGCCGCTGTGACCGCAAGTGGCT ACCAAGTGTGGAGCTGAATGCTGCTGTGACCGCAAGTGGCT < 41bp 0.470429877745891 0.710859150239509 0.10476881 0.14511812 prediction 0.421718300479017 Functional Gain - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30358264 chr11:30358265 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124184 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:30358109-30358293
64251 chr10 114925435 114925435 1 + C T UCEC 114925434 + 114925414 114925454 41 AACCTGCTAGGCTCCCCTCCCCGAGACGCCAAGTCACAGAC AACCTGCTAGGCTCCCCTCCCTGAGACGCCAAGTCACAGAC < 41bp 0.550806026967324 0.761655855723474 0.3257962 0.18656856 prediction 0.421699657512301 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925434 chr10:114925435 stopgain 0.998 0 22 hm5C_associated_SNPs_124187 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:114925414-114925436
64251 chr11 59560935 59560935 1 + T C PAAD 59560933 + 59560913 59560953 41 ATTGTGAGGCTGGAGAGCAGCATCAAGGAGCTTCACGACAT ATTGTGAGGCTGGAGAGCAGCACCAAGGAGCTTCACGACAT < 41bp 0.669804793004733 0.88064778739003 0.1126689 0.08578405 prediction 0.421685988770594 Functional Gain - STX3 ENSG00000166900 CDS Human protein_coding chr11:59560933 chr11:59560935 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_124188 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:59560891-59560936
64251 chr16 304613 304613 1 + A G LUSC 304610 + 304590 304630 41 CTTTTTGTGGTGTTCGTCGTCTCATTCGTCATCCCGTGTCC CTTTTTGTGGTGTTCGTCGTCTCGTTCGTCATCCCGTGTCC < 41bp 0.454799396180585 0.710839617328717 0.06648293 0.12830544 prediction 0.421679234657433 Functional Gain - FAM234A ENSG00000167930;ENSG00000269881 CDS Human other chr16:304610 chr16:304613 synonymous SNV . 0 24 hm5C_associated_SNPs_124191 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:304580-304620
64251 chr3 14170930 14170930 1 + C T UCEC 14170929 + 14170909 14170949 41 CAGTATTCCAGTACCAGTACCCGGAGAGAACATGTCAAAGT CAGTATTCCAGTACCAGTACCTGGAGAGAACATGTCAAAGT < 41bp 0.457376617390717 0.710836624687766 0.88771486 0.22710052 prediction 0.421673249375532 Functional Gain - TMEM43 ENSG00000170876 CDS Human protein_coding chr3:14170929 chr3:14170930 nonsynonymous SNV 0.319 3 22 hm5C_associated_SNPs_124192 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr3:14170905-14170944
64251 chr19 3449072 3449072 1 + C T COAD 3449071 + 3449051 3449091 41 CACCATTCAACAGCCCGTCCCCCCAGGACTCTCCCCGCCTC CACCATTCAACAGCCCGTCCCTCCAGGACTCTCCCCGCCTC < 41bp 0.414895169380859 0.710830339101993 0.11825454 0.9527115 prediction 0.421660678203986 Functional Gain - NFIC ENSG00000141905 CDS Human protein_coding chr19:3449071 chr19:3449072 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_124195 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:3449049-3449095
64251 chr8 27402020 27402020 1 + C T rs4987060 27402019 + 27401999 27402039 41 ATTCTGATGCCCGGAACCCACCGGTGGTCTCAAAGATGTAG ATTCTGATGCCCGGAACCCACTGGTGGTCTCAAAGATGTAG < 41bp 0.566487488334338 0.777309744756015 0.20009068 0.20048586 prediction 0.421644512843353 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27402019 chr8:27402020 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_124197 0 0 2 GEMIN5 POSTAR2 ENCODE chr8:27402000-27402045
64251 chr17 70117908 70117908 1 + C T BRCA 70117907 + 70117887 70117927 41 GCGCGCAGGAAGCTCGCGGACCAGTACCCGCACTTGCACAA GCGCGCAGGAAGCTCGCGGACTAGTACCCGCACTTGCACAA < 41bp 0.471857031236166 0.71082122272403 0.3026201 0.23807377 prediction 0.421642445448059 Functional Gain - SOX9 ENSG00000125398 CDS Human protein_coding chr17:70117907 chr17:70117908 stopgain 0.480 0 22 hm5C_associated_SNPs_124199 0 0 1 RPS3 POSTAR2 ENCODE chr17:70117881-70117920
64251 chr16 2514159 2514159 1 + C T SKCM 2514158 + 2514138 2514178 41 CTGCTTGTCTACTCCAGCACCCAGGAGCTGCAGACCCTGGC CTGCTTGTCTACTCCAGCACCTAGGAGCTGCAGACCCTGGC < 41bp 0.471584949985577 0.710818755434748 0.1709159 0.106615365 prediction 0.421637510869497 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2514158 chr16:2514159 stopgain 0.887 0 22 hm5C_associated_SNPs_124201 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr16:2514159-2514160
64251 chr12 13368985 13368985 1 + C G rs561037465 13368984 + 13368964 13369004 41 GGTAGACGAGCTGTCTGCTGCCGCAGGAGCACCTCTATACA GGTAGACGAGCTGTCTGCTGCGGCAGGAGCACCTCTATACA < 41bp 0.656530447156374 0.86734884081055 0.31379825 0.868678 prediction 0.421636787308351 Functional Gain - EMP1 ENSG00000134531 UTR3 Human protein_coding chr12:13368984 chr12:13368985 . . 0 22 hm5C_associated_SNPs_124203 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:13368980-13369005
64251 chr16 29706219 29706219 1 + C T UCEC 29706218 + 29706198 29706238 41 CCGAGGGATCGAAGCTGGTGCCGGTGGCCAGAGTGGCCGAG CCGAGGGATCGAAGCTGGTGCTGGTGGCCAGAGTGGCCGAG < 41bp 0.555339477800497 0.766155595311432 0.7597796 0.62032807 prediction 0.42163223502187 Functional Gain - QPRT ENSG00000103485 CDS Human protein_coding chr16:29706218 chr16:29706219 nonsynonymous SNV 0.578 3 22 hm5C_associated_SNPs_124205 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29706206-29706272
64251 chr19 55494071 55494071 1 + C T LUSC 55494070 + 55494050 55494090 41 CAAGGCCGCCCTGCTGGTCACCACGCGGCCCAGGGCCCTGA CAAGGCCGCCCTGCTGGTCACTACGCGGCCCAGGGCCCTGA < 41bp 0.446255932403594 0.710814416741048 0.114429265 0.23597348 prediction 0.421628833482096 Functional Gain - NLRP2 ENSG00000022556 CDS Human protein_coding chr19:55494070 chr19:55494071 synonymous SNV . 0 22 hm5C_associated_SNPs_124207 0 0 3 FMR1 POSTAR2 ENCODE chr19:55494060-55494133
64251 chr20 5904676 5904676 1 + C A COAD 5904675 + 5904655 5904695 41 ACTTCTATGATTCTGAGGAGCCGGTGAGCACCCACCAGGAG ACTTCTATGATTCTGAGGAGCAGGTGAGCACCCACCAGGAG < 41bp 0.451145842627209 0.710808571466277 0.8740595 0.9095621 prediction 0.421617142932553 Functional Gain - CHGB ENSG00000089199 CDS Human protein_coding chr20:5904675 chr20:5904676 nonsynonymous SNV 0.452 0 22 hm5C_associated_SNPs_124210 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:5904654-5904680
64251 chr20 61597896 61597896 1 + C T UCEC 61597895 + 61597875 61597915 41 AGTGGCATTTCTGTTAACATCCAGGACTTGGCCCCGTCCTG AGTGGCATTTCTGTTAACATCTAGGACTTGGCCCCGTCCTG < 41bp 0.599995648970827 0.810801532409066 0.41122317 0.24588326 prediction 0.421611766876478 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61597895 chr20:61597896 stopgain 0.982 1 22 hm5C_associated_SNPs_124211 0 0 2 PPIG POSTAR2 ENCODE chr20:61597888-61597927
64251 chr6 111288819 111288819 1 + C T PRAD 111288818 + 111288798 111288838 41 CGAAGAAGTGGTAGCTTCAGCCCCAGATAAATCTTTGGAAT CGAAGAAGTGGTAGCTTCAGCTCCAGATAAATCTTTGGAAT < 41bp 0.614962065679006 0.825767475454874 0.14362407 0.21948528 prediction 0.421610819551734 Functional Gain - GTF3C6 ENSG00000155115 CDS Human protein_coding chr6:111288818 chr6:111288819 synonymous SNV . 0 22 hm5C_associated_SNPs_124212 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:111288814-111288852
64251 chr18 8394487 8394487 1 + C T STAD 8394486 + 8394466 8394506 41 CACGACAGGAACGGGGGAGGCCGCAGTGGGACGTTCTGCGC CACGACAGGAACGGGGGAGGCTGCAGTGGGACGTTCTGCGC < 41bp 0.503928954355863 0.714732882323885 0.90005744 0.9078002 prediction 0.421607855936043 Functional Gain - PTPRM ENSG00000173482 CDS Human protein_coding chr18:8394486 chr18:8394487 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124213 0 0 1 TBRG4 POSTAR2 ENCODE chr18:8394471-8394513
64251 chr5 149230730 149230730 1 + T C rs25846 149230728 + 149230708 149230748 41 ACCCAGTACTCAAGTTCTGACGTGGGAGGAGATGCAGTGAG ACCCAGTACTCAAGTTCTGACGCGGGAGGAGATGCAGTGAG < 41bp 0.532181871855967 0.742965593485481 0.8965169 0.8945019 prediction 0.421567443259027 Functional Gain - PPARGC1B ENSG00000155846 UTR3 Human protein_coding chr5:149230728 chr5:149230730 . . 0 23 hm5C_associated_SNPs_124221 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:149230726-149230752
64251 chr7 141443725 141443725 1 + T C COAD 141443723 + 141443703 141443743 41 TGATGTCAGTCAAAAGACAACATGGCACAGAATATCAGTAT TGATGTCAGTCAAAAGACAACACGGCACAGAATATCAGTAT < 41bp 0.438635420910085 0.710780215264784 0.044197947 0.022497922 prediction 0.421560430529568 Functional Gain - SSBP1 ENSG00000106028 CDS Human protein_coding chr7:141443723 chr7:141443725 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_124224 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr7:141443694-141443729
64251 chr4 186231849 186231849 1 + T C COAD 186231847 + 186231827 186231867 41 GCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGC GCCAGGAACATGAAGAGGTACACCAACCAACTGACTGTGGC < 41bp 0.401626692382858 0.710779265201902 0.09594685 0.11844656 prediction 0.421558530403803 Functional Gain - SNX25 ENSG00000109762 CDS Human protein_coding chr4:186231847 chr4:186231849 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_124225 0 0 2 UCHL5 POSTAR2 ENCODE chr4:186231809-186231948
64251 chr16 30999555 30999555 1 + C G rs376693465 30999554 + 30999534 30999574 41 ACAGCACATCCACCCAGGTCCCGAGCCCTCACACCCTGGAC ACAGCACATCCACCCAGGTCCGGAGCCCTCACACCCTGGAC < 41bp 0.396775464515566 0.710775723122115 0.096457094 0.27052274 prediction 0.42155144624423 Functional Gain - HSD3B7 ENSG00000099377 UTR3 Human protein_coding chr16:30999554 chr16:30999555 . . 0 22 hm5C_associated_SNPs_124227 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:30999537-30999571
64251 chr11 47256210 47256210 1 + T C STAD 47256208 + 47256188 47256228 41 GGGAACGTGATCCTGCTGAACATGGACGGCAAAGAGGTGCG GGGAACGTGATCCTGCTGAACACGGACGGCAAAGAGGTGCG < 41bp 0.60485452203571 0.815629662992265 0.28404158 0.3015244 prediction 0.421550281913111 Functional Gain - DDB2 ENSG00000134574 CDS Human protein_coding chr11:47256208 chr11:47256210 nonsynonymous SNV 0.972 0 23 hm5C_associated_SNPs_124228 0 0 5 DDX24 POSTAR2 ENCODE chr11:47256168-47256224
64251 chr5 82789433 82789433 1 + T G KIRC 82789431 + 82789411 82789451 41 TTTTGAGGCTGCTCAGAAGGCTTGTTTGGACGTTGGGGCAG TTTTGAGGCTGCTCAGAAGGCTGGTTTGGACGTTGGGGCAG < 41bp 0.379087823204184 0.710735954869009 0.12308398 0.21269804 prediction 0.421471909738018 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82789431 chr5:82789433 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_124240 0 0 4 LIN28A POSTAR2 GSE39873,GSM980593 chr5:82789400-82789440
64251 chr19 8528506 8528506 1 + T A KIRC 8528504 + 8528484 8528524 41 GAATTCAAGATGGAAGAGAGCATGAAAAAAGCTGCGGAAGT GAATTCAAGATGGAAGAGAGCAAGAAAAAAGCTGCGGAAGT < 41bp 0.514155836871765 0.724890435931012 0.090596974 0.8840851 prediction 0.421469198118493 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8528504 chr19:8528506 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_124242 0 0 28 TARDBP POSTAR2 DRA001158,DRS012387 chr19:8528478-8528568
64251 chr1 174975972 174975972 1 + A G rs1802325 174975969 + 174975949 174975989 41 GAGAATGTGCAGGTGCATTTCACAGAGAGGTGAGTTCTCAT GAGAATGTGCAGGTGCATTTCACGGAGAGGTGAGTTCTCAT < 41bp 0.575221196629485 0.785952250052433 0.047115654 0.23648542 prediction 0.421462106845895 Functional Gain - CACYBP ENSG00000116161 CDS Human protein_coding chr1:174975969 chr1:174975972 synonymous SNV . 0 24 hm5C_associated_SNPs_124245 0 0 2 AARS POSTAR2 ENCODE chr1:174975914-174975989
64251 chr20 61455825 61455825 1 + C A LUAD 61455824 + 61455804 61455844 41 GTATCTGCCCGCCAGGTCCCCCAGGGCCCCCTGGAATGCCA GTATCTGCCCGCCAGGTCCCCAAGGGCCCCCTGGAATGCCA < 41bp 0.435178238838282 0.710720602564853 0.5105059 0.8948935 prediction 0.421441205129706 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61455824 chr20:61455825 nonsynonymous SNV 0.073 4 22 hm5C_associated_SNPs_124249 0 0 3 GRWD1 POSTAR2 ENCODE chr20:61455797-61455843
64251 chr10 105048263 105048263 1 + T G STAD 105048260 + 105048240 105048280 41 AGTCTCATCCACTGGGCTATCACTTAAGAAAGAGGAGGAGG AGTCTCATCCACTGGGCTATCACGTAAGAAAGAGGAGGAGG < 41bp 0.318333321927854 0.710719318060807 0.14672023 0.38972712 prediction 0.421438636121614 Functional Gain - INA ENSG00000148798 CDS Human protein_coding chr10:105048260 chr10:105048263 nonsynonymous SNV 0.955 1 24 hm5C_associated_SNPs_124250 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:105048241-105048267
64251 chr19 44103069 44103069 1 + C G BLCA 44103068 + 44103048 44103088 41 CGTCACATGAAGCGGGAGCACCCAGCGGACTTCGTGGCCCA CGTCACATGAAGCGGGAGCACGCAGCGGACTTCGTGGCCCA < 41bp 0.396287786105111 0.71071875795415 0.33423424 0.5786818 prediction 0.421437515908299 Functional Gain - ZNF576 ENSG00000124444 CDS Human protein_coding chr19:44103068 chr19:44103069 nonsynonymous SNV 0.974 2 22 hm5C_associated_SNPs_124251 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44103054-44103081
64251 chr1 117910860 117910860 1 + C T BRCA 117910859 + 117910839 117910879 41 CGTAGGATACCACCTCTGAACCTGGGGCCGCCTTCCTTCCC CGTAGGATACCACCTCTGAACTTGGGGCCGCCTTCCTTCCC < 41bp 0.479175879265836 0.710718670780021 0.44766042 0.23156494 prediction 0.421437341560042 Functional Gain - MAN1A2 ENSG00000198162 CDS Human protein_coding chr1:117910859 chr1:117910860 synonymous SNV . 0 22 hm5C_associated_SNPs_124252 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr1:117910808-117910897
64251 chr10 104159894 104159894 1 + T C UCEC 104159891 + 104159871 104159911 41 AGTGTCATTGAGCAGATAGTCTATGTCATCCACCACGCCCA AGTGTCATTGAGCAGATAGTCTACGTCATCCACCACGCCCA < 41bp 0.494843641729305 0.710718359950589 0.1377657 0.14376119 prediction 0.421436719901178 Functional Gain - NFKB2 ENSG00000077150 CDS Human protein_coding chr10:104159891 chr10:104159894 synonymous SNV . 0 24 hm5C_associated_SNPs_124253 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:104159883-104159925
64251 chr3 49569129 49569129 1 + C T LIHC 49569128 + 49569108 49569148 41 TCGGGTGTCAGAAGCTGGCACCACAGTTCCTGGCCAGATTC TCGGGTGTCAGAAGCTGGCACTACAGTTCCTGGCCAGATTC < 41bp 0.455339969372962 0.710716446998832 0.11846882 0.32804674 prediction 0.421432893997665 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49569128 chr3:49569129 synonymous SNV . 0 22 hm5C_associated_SNPs_124254 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:49569118-49569144
64251 chr19 41822663 41822663 1 + C T STAD 41822662 + 41822642 41822682 41 TTCTACTGTGCTGAGGTGGCCCGGCAGGGCACTGCCCGGCC TTCTACTGTGCTGAGGTGGCCTGGCAGGGCACTGCCCGGCC < 41bp 0.471576048346769 0.710707082091103 0.104028404 0.19784462 prediction 0.421414164182206 Functional Gain - CCDC97 ENSG00000142039 CDS Human protein_coding chr19:41822662 chr19:41822663 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_124260 0 0 1 RBM15 POSTAR2 ENCODE chr19:41822577-41822696
64251 chr3 141161649 141161649 1 + A G UCEC 141161646 + 141161626 141161666 41 TCCCTATGTATTCTGTATTACTGAAAAGGGAGTGGTTAAAG TCCCTATGTATTCTGTATTACTGGAAAGGGAGTGGTTAAAG < 41bp 0.483568825779463 0.710699811796612 0.18111098 0.22260043 prediction 0.421399623593223 Functional Gain - ZBTB38 ENSG00000177311 CDS Human protein_coding chr3:141161646 chr3:141161649 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_124261 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:141161640-141161666
64251 chrX 103434328 103434328 1 + C T STAD 103434327 + 103434307 103434347 41 AAGTTACAGCAGAAGGCCTTCCGCAAGAGGCAGCTGAAGGA AAGTTACAGCAGAAGGCCTTCTGCAAGAGGCAGCTGAAGGA < 41bp 0.612322357925505 0.823016975603335 0.2367262 0.1996266 prediction 0.421389235355659 Functional Gain - FAM199X ENSG00000123575 CDS Human protein_coding chrX:103434327 chrX:103434328 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124263 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:103434316-103434348
64251 chr1 9661445 9661445 1 + C T UCEC 9661444 + 9661424 9661464 41 TGGGCCTTTGGGCAGAGCCACCAGACGGGCGTCGTGGCACT TGGGCCTTTGGGCAGAGCCACTAGACGGGCGTCGTGGCACT < 41bp 0.449563209107384 0.710677441859263 0.5869638 0.78917444 prediction 0.421354883718525 Functional Gain - TMEM201 ENSG00000188807 CDS Human protein_coding chr1:9661444 chr1:9661445 stopgain 0.966 1 22 hm5C_associated_SNPs_124265 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:9661440-9661465
64251 chr1 151006689 151006689 1 + A G STAD 151006686 + 151006666 151006706 41 ATCTCACTGTCACAGTCTACCACAGCCTCCCTGTCCAAGAA ATCTCACTGTCACAGTCTACCACGGCCTCCCTGTCCAAGAA < 41bp 0.60016919044659 0.810845168423569 0.02156952 0.098190576 prediction 0.421351955953959 Functional Gain - PRUNE1 ENSG00000143363 CDS Human protein_coding chr1:151006686 chr1:151006689 synonymous SNV . 0 24 hm5C_associated_SNPs_124266 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:151006680-151006704
64251 chr1 235606224 235606224 1 + C G rs114972093 235606223 + 235606203 235606243 41 AAGTCCTGGAGAAACAACTGCCGGGTAAGAAGAACCAGCCT AAGTCCTGGAGAAACAACTGCGGGGTAAGAAGAACCAGCCT < 41bp 0.395869033147382 0.710671147662847 0.54990447 0.9225373 prediction 0.421342295325694 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235606223 chr1:235606224 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_124270 0 0 5 BUD13 POSTAR2 ENCODE chr1:235606195-235606241
64251 chr1 45242407 45242407 1 + C G KIRP 45242406 + 45242386 45242426 41 GGTAACAAGAAATACCGTGCCCTGAGGTTGGACGTGGGGAA GGTAACAAGAAATACCGTGCCGTGAGGTTGGACGTGGGGAA < 41bp 0.67534762939743 0.886011627274822 0.09188056 0.2066482 prediction 0.421327995754786 Functional Gain - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45242406 chr1:45242407 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_124272 0 0 54 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:45242344-45242447
64251 chr8 126021295 126021295 1 + T C UCEC 126021292 + 126021272 126021312 41 CCTGGTCTCCAATAAAGTTTCTGTATCATCTCATTTTGTTG CCTGGTCTCCAATAAAGTTTCTGCATCATCTCATTTTGTTG < 41bp 0.485528466714285 0.710653797520869 0.0057227015 0.024736613 prediction 0.421307595041737 Functional Gain - SQLE ENSG00000104549 CDS Human protein_coding chr8:126021292 chr8:126021295 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_124276 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr8:126021262-126021303
64251 chr14 24114495 24114495 1 + C T SKCM 24114494 + 24114474 24114514 41 GCGGCTGCGTAGCTGTGGTCCCAGGCCCAGGAGCCTGAGGG GCGGCTGCGTAGCTGTGGTCCTAGGCCCAGGAGCCTGAGGG < 41bp 0.528496616040743 0.73914879165426 0.5609532 0.5100756 prediction 0.421304351227033 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24114494 chr14:24114495 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_124277 0 0 16 DDX55 POSTAR2 ENCODE chr14:24114440-24114517
64251 chr1 32042885 32042885 1 + C A UCEC 32042884 + 32042864 32042904 41 GGCATCCGGGACGCGGGAGGCCGGTACTGCCAGGAGCAGGA GGCATCCGGGACGCGGGAGGCAGGTACTGCCAGGAGCAGGA < 41bp 0.62070115433909 0.831347741614857 0.70306367 0.9141408 prediction 0.421293174551535 Functional Gain - TINAGL1 ENSG00000142910 CDS Human protein_coding chr1:32042884 chr1:32042885 synonymous SNV . 0 22 hm5C_associated_SNPs_124281 0 0 1 DDX3X POSTAR2 ENCODE chr1:32042848-32042920
64251 chr16 31885186 31885186 1 + C G rs74549920 31885182 + 31885162 31885202 41 GTCTTTCGTTCTGGGAGGCCCAGGCGGCTTCGCGTTCTGAG GTCTTTCGTTCTGGGAGGCCCAGGGGGCTTCGCGTTCTGAG < 41bp 0.656227998635205 0.866869953105868 0.8977432 0.9208633 prediction 0.421283908941326 Functional Gain - ZNF267 ENSG00000185947 CDS Human protein_coding chr16:31885182 chr16:31885186 unknown . 0 25 hm5C_associated_SNPs_124284 0 0 8 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:31885152-31885190
64251 chr8 25181418 25181418 1 + C G THCA 25181417 + 25181397 25181437 41 CCTTCGTGAAGCTGATGAACCCGGATGGCACCACTCTGCAG CCTTCGTGAAGCTGATGAACCGGGATGGCACCACTCTGCAG < 41bp 0.670139106847717 0.880766537266381 0.7121344 0.8948083 prediction 0.421254860837327 Functional Gain - DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25181417 chr8:25181418 nonsynonymous SNV 0.891 0 22 hm5C_associated_SNPs_124291 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr8:25181400-25181420
64251 chr7 157015981 157015981 1 + A G LIHC 157015978 + 157015958 157015998 41 GTCCCCGCCGCTGTCTGTGTCTGAGGAAAGACAGCTTGCTG GTCCCCGCCGCTGTCTGTGTCTGGGGAAAGACAGCTTGCTG < 41bp 0.592806034811014 0.803431641031333 0.27444595 0.8921808 prediction 0.421251212440639 Functional Gain - UBE3C ENSG00000009335 CDS Human protein_coding chr7:157015978 chr7:157015981 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_124293 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr7:157015951-157015984
64251 chrX 139865907 139865907 1 + A G rs542725946 139865904 + 139865884 139865924 41 TCCAGTCAATCCACATCTTCCGGAAAAAATCCAGGTCTTCC TCCAGTCAATCCACATCTTCCGGGAAAAATCCAGGTCTTCC < 41bp 0.573226987211382 0.783847722946942 0.1607945 0.71315235 prediction 0.42124147147112 Functional Gain - CDR1 ENSG00000184258 CDS Human protein_coding chrX:139865904 chrX:139865907 nonsynonymous SNV 0.783 0 24 hm5C_associated_SNPs_124296 0 0 7 FUS POSTAR2 GSE40653,GSM998875 chrX:139865780-139865940
64251 chr22 18213193 18213193 1 + C G rs145769173 18213192 + 18213172 18213212 41 GCTTGTCCTGGGGGAGTGAGCCGTGAACCTGGAGACATGGC GCTTGTCCTGGGGGAGTGAGCGGTGAACCTGGAGACATGGC < 41bp 0.465052572228615 0.71062055125083 0.2632479 0.6888094 prediction 0.421241102501661 Functional Gain - BCL2L13 ENSG00000099968 UTR3 Human protein_coding chr22:18213192 chr22:18213193 . . 0 22 hm5C_associated_SNPs_124298 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr22:18213169-18213207
64251 chr2 25038412 25038412 1 + T C UCEC 25038409 + 25038389 25038429 41 CGAGGAGTTTGTGTCTGCATCAGTACTGCTTTTGAGGGGAA CGAGGAGTTTGTGTCTGCATCAGCACTGCTTTTGAGGGGAA < 41bp 0.55414173433783 0.764757849000616 0.2588828 0.30087754 prediction 0.421232229325572 Functional Gain - CENPO ENSG00000138092 CDS Human protein_coding chr2:25038409 chr2:25038412 synonymous SNV . 0 24 hm5C_associated_SNPs_124299 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr2:25038377-25038431
64251 chrX 117960109 117960109 1 + C A UCEC 117960108 + 117960088 117960128 41 CCCTCAGAGACAGGGCCAGACCTCAGGATGAAGTGCTGGTC CCCTCAGAGACAGGGCCAGACATCAGGATGAAGTGCTGGTC < 41bp 0.43419376268257 0.710614572529623 0.05444485 0.09527877 prediction 0.421229145059246 Functional Gain - ZCCHC12 ENSG00000174460 CDS Human protein_coding chrX:117960108 chrX:117960109 nonsynonymous SNV 0.029 1 22 hm5C_associated_SNPs_124301 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:117960096-117960127
64251 chr11 64128706 64128706 1 + C A SKCM 64128702 + 64128682 64128722 41 TCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGGTGAGTGGA TCGGGCTGAGCAAGGAGTTCCTGAAGGAGGAGGTGAGTGGA < 41bp 0.287386986598558 0.710611301671882 0.24616784 0.44752797 prediction 0.421222603343764 Functional Gain - RPS6KA4 ENSG00000162302 CDS Human protein_coding chr11:64128702 chr11:64128706 nonsynonymous SNV 0.998 0 25 hm5C_associated_SNPs_124305 0 0 1 UCHL5 POSTAR2 ENCODE chr11:64128666-64128712
64251 chr8 143817142 143817142 1 + T C rs111736694 143817140 + 143817120 143817160 41 GGCCCTACGATGAGGCCACTCATGTGGGCCTAGGTAGGGGA GGCCCTACGATGAGGCCACTCACGTGGGCCTAGGTAGGGGA < 41bp 0.487961282468476 0.710605141926322 0.28821468 0.26731157 prediction 0.421210283852644 Functional Gain - THEM6 ENSG00000130193 UTR3 Human protein_coding chr8:143817140 chr8:143817142 . . 0 23 hm5C_associated_SNPs_124309 0 0 4 UPF1 POSTAR2 GSE69586,GSM1704214 chr8:143817140-143817160
64251 chr1 25628156 25628156 1 + C A COAD 25628152 + 25628132 25628172 41 CATCTCAGGGTCATCCTTGGCTCACCCCCAAGGGAAGATCA CATCTCAGGGTCATCCTTGGCTCAACCCCAAGGGAAGATCA < 41bp 0.281109583194071 0.710597424660576 0.10162678 0.20426744 prediction 0.421194849321152 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25628152 chr1:25628156 nonsynonymous SNV 0.680 2 25 hm5C_associated_SNPs_124313 0 0 2 SND1 POSTAR2 ENCODE chr1:25628109-25628176
64251 chr7 114655819 114655819 1 + T C UCEC 114655817 + 114655797 114655837 41 CAACATTGTCCTGGGACAAGCGTCATGTGGCATCTGCACCT CAACATTGTCCTGGGACAAGCGCCATGTGGCATCTGCACCT < 41bp 0.658059179298392 0.868654392147142 0.23514241 0.29629436 prediction 0.421190425697499 Functional Gain - MDFIC ENSG00000135272 CDS Human protein_coding chr7:114655817 chr7:114655819 nonsynonymous SNV 0.465 4 23 hm5C_associated_SNPs_124314 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr7:114655796-114655823
64251 chrX 18622765 18622765 1 + C T UCEC 18622764 + 18622744 18622784 41 CGATGGAGGAATTGAAGCTGCCGGAGCACATGGACAGTAGC CGATGGAGGAATTGAAGCTGCTGGAGCACATGGACAGTAGC < 41bp 0.459734926771715 0.710595170384153 0.37123227 0.26171786 prediction 0.421190340768306 Functional Gain - CDKL5 ENSG00000008086 CDS Human protein_coding chrX:18622764 chrX:18622765 nonsynonymous SNV 0.881 2 22 hm5C_associated_SNPs_124315 1 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chrX:18622758-18622793
64251 chr1 16095093 16095093 1 + C A THCA 16095089 + 16095069 16095109 41 TGGAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAG TGGAGGAAGAGCTGCCACCTCCCCAGGCAGAACCTGTTGAG < 41bp 0.276930052215918 0.710590355137928 0.08808792 0.22991729 prediction 0.421180710275856 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16095089 chr1:16095093 nonsynonymous SNV 0.026 2 25 hm5C_associated_SNPs_124320 0 0 1 PPIG POSTAR2 ENCODE chr1:16095027-16095110
64251 chr7 128509207 128509207 1 + C G rs116296846 128509206 + 128509186 128509226 41 ACCGCCACACCCCTCCTTGCCCGCCCCTCACCTGGCCCCGA ACCGCCACACCCCTCCTTGCCGGCCCCTCACCTGGCCCCGA < 41bp 0.399971271425525 0.710586421797219 0.09198153 0.31651464 prediction 0.421172843594438 Functional Gain - LOC100130705 ENSG00000135253 ncRNA_intronic Human protein_coding chr7:128509206 chr7:128509207 . . 0 22 hm5C_associated_SNPs_124323 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr7:128509202-128509278
64251 chr19 42407537 42407537 1 + C A CESC 42407533 + 42407513 42407553 41 CTACACCACGTCAACCAAGCCGTGCGTGACATGGAGGACCT CTACACCACGTCAACCAAGCCGTGAGTGACATGGAGGACCT < 41bp 0.295946840625859 0.710585716800169 0.3106172 0.34037736 prediction 0.421171433600338 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42407533 chr19:42407537 nonsynonymous SNV 0.996 3 25 hm5C_associated_SNPs_124324 0 0 9 DDX24 POSTAR2 ENCODE chr19:42407501-42407554
64251 chr8 37611044 37611044 1 + T C rs142722211 37611041 + 37611021 37611061 41 GCTATGAAAATAGCCGAAGCCAATAAGGTAAAGACCCCGCA GCTATGAAAATAGCCGAAGCCAACAAGGTAAAGACCCCGCA < 41bp 0.528672409155136 0.73924994298788 0.14065915 0.16671681 prediction 0.421155067665488 Functional Gain - ERLIN2 ENSG00000147475 CDS Human protein_coding chr8:37611041 chr8:37611044 synonymous SNV . 0 24 hm5C_associated_SNPs_124328 0 0 7 BUD13 POSTAR2 ENCODE chr8:37610962-37611046
64251 chr17 4925839 4925839 1 + T C STAD 4925836 + 4925816 4925856 41 GGAGCTGGCAGTGGTGGTGGCAGTGAGGAGGGAGCCCGAGG GGAGCTGGCAGTGGTGGTGGCAGCGAGGAGGGAGCCCGAGG < 41bp 0.517626773086425 0.728200949259335 0.82735646 0.8490634 prediction 0.42114835234582 Functional Gain - KIF1C ENSG00000129250 CDS Human protein_coding chr17:4925836 chr17:4925839 synonymous SNV . 0 24 hm5C_associated_SNPs_124329 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:4925828-4925866
64251 chr11 212613 212613 1 + A G STAD 212610 + 212590 212630 41 AGCTTAGGGATGGCCACCTCCCCAGGTGCTGCCCCCTCTGC AGCTTAGGGATGGCCACCTCCCCGGGTGCTGCCCCCTCTGC < 41bp 0.612886111088974 0.823451395347725 0.53424186 0.8574088 prediction 0.421130568517502 Functional Gain - RIC8A;RIC8A ENSG00000177963;ENSG00000177963 exonic;splicing Human other chr11:212610 chr11:212613 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_124332 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:212609-212636
64251 chr1 87805767 87805767 1 + C T BRCA 87805766 + 87805746 87805786 41 CCTGCCGGAATCGCCTGGTCCCGGGAGATCGGTTTCACTAC CCTGCCGGAATCGCCTGGTCCTGGGAGATCGGTTTCACTAC < 41bp 0.610810370532842 0.821369111472175 0.92925537 0.7760803 prediction 0.421117481878667 Functional Gain - LMO4 ENSG00000143013 CDS Human protein_coding chr1:87805766 chr1:87805767 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_124335 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:87805740-87805777
64251 chr15 60297942 60297942 1 + C A STAD 60297941 + 60297921 60297961 41 CCAAACGCTGCCCGCCATCCCCGTGCCCATTAAGCCCACGC CCAAACGCTGCCCGCCATCCCAGTGCCCATTAAGCCCACGC < 41bp 0.458929322785519 0.710558680904714 0.06712052 0.12614092 prediction 0.421117361809428 Functional Gain - FOXB1 ENSG00000171956 CDS Human protein_coding chr15:60297941 chr15:60297942 synonymous SNV . 0 22 hm5C_associated_SNPs_124336 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr15:60297927-60297954
64251 chr22 50319194 50319194 1 + C T rs535022209 50319193 + 50319173 50319213 41 CGGAAGATGCCTGTGTGCCGCCGGCAGAGGCTGGTGAGTGG CGGAAGATGCCTGTGTGCCGCTGGCAGAGGCTGGTGAGTGG < 41bp 0.557412638444917 0.767969823584086 0.20437664 0.18158197 prediction 0.421114370278339 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50319193 chr22:50319194 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_124338 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr22:50319178-50319205
64251 chr5 148586680 148586680 1 + C T UCEC 148586679 + 148586659 148586699 41 GACCTGCAGCGTCATCCTCACCGGGGAGTATATCAGCAAGT GACCTGCAGCGTCATCCTCACTGGGGAGTATATCAGCAAGT < 41bp 0.60394880464572 0.814501644227862 0.8692602 0.72185904 prediction 0.421105679164284 Functional Gain - ABLIM3 ENSG00000173210 CDS Human protein_coding chr5:148586679 chr5:148586680 synonymous SNV . 0 22 hm5C_associated_SNPs_124339 0 0 1 PRPF8 POSTAR2 ENCODE chr5:148586674-148586740
64251 chr4 38910256 38910256 1 + T C STAD 38910254 + 38910234 38910274 41 GGCCTTGATGCGTTGGAATTCATCGGCAAGAAAACCATGAA GGCCTTGATGCGTTGGAATTCACCGGCAAGAAAACCATGAA < 41bp 0.420547053571551 0.710550823755451 0.19581336 0.23991886 prediction 0.421101647510902 Functional Gain - FAM114A1 ENSG00000197712 CDS Human protein_coding chr4:38910254 chr4:38910256 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_124340 0 0 3 GRWD1 POSTAR2 ENCODE chr4:38910218-38910261
64251 chr10 64913387 64913387 1 + C G LUAD 64913383 + 64913363 64913403 41 ATTGAAAGCCCAGCAGAACACAGACAAGGATGCAGCTGCCC ATTGAAAGCCCAGCAGAACACAGAGAAGGATGCAGCTGCCC < 41bp 0.665141006974909 0.875665623412863 0.07596952 0.262065 prediction 0.421049232875907 Functional Gain - NRBF2 ENSG00000148572 CDS Human protein_coding chr10:64913383 chr10:64913387 nonsynonymous SNV 0.028 0 25 hm5C_associated_SNPs_124345 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:64913387-64913413
64251 chr9 90345956 90345956 1 + A G rs142361476 90345953 + 90345933 90345973 41 GAATGGGGCATGGGTGGCTACGTAAAGATGGCCAAAGACCG GAATGGGGCATGGGTGGCTACGTGAAGATGGCCAAAGACCG < 41bp 0.564206116160861 0.774730731615135 0.1682947 0.3217734 prediction 0.421049230908547 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90345953 chr9:90345956 synonymous SNV . 0 24 hm5C_associated_SNPs_124346 0 0 6 DDX6 POSTAR2 ENCODE chr9:90345923-90346027
64251 chr10 93740313 93740313 1 + A G UCEC 93740310 + 93740290 93740330 41 AGGAAATTCTGGACCTTATTCACAAGGTACACAGCAAATGT AGGAAATTCTGGACCTTATTCACGAGGTACACAGCAAATGT < 41bp 0.481200266202576 0.710515766226198 0.06051165 0.09880084 prediction 0.421031532452395 Functional Gain - BTAF1 ENSG00000095564 CDS Human protein_coding chr10:93740310 chr10:93740313 nonsynonymous SNV 0.979 2 24 hm5C_associated_SNPs_124349 0 0 2 ZC3H7B POSTAR2 GSE38201,GSM936510 chr10:93740292-93740315
64251 chr1 26897990 26897990 1 + C T rs11546000 26897989 + 26897969 26898009 41 CATCCTGTATGTGGACGAGTCCGGGAATCCCGAGTGCCTGC CATCCTGTATGTGGACGAGTCTGGGAATCCCGAGTGCCTGC < 41bp 0.6095284310211 0.820041399922527 0.5239767 0.38347995 prediction 0.421025937802854 Functional Gain - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26897989 chr1:26897990 synonymous SNV . 0 22 hm5C_associated_SNPs_124350 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr1:26897965-26898001
64251 chr18 60242142 60242142 1 + C T ESCA 60242141 + 60242121 60242161 41 TCAGCACAGCAGCAACTTCTCCCCAGCCAGCGAGCGCAGGT TCAGCACAGCAGCAACTTCTCTCCAGCCAGCGAGCGCAGGT < 41bp 0.627457188907624 0.837965390180936 0.031979263 0.8753867 prediction 0.421016402546624 Functional Gain - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60242141 chr18:60242142 nonsynonymous SNV 0.714 1 22 hm5C_associated_SNPs_124355 0 0 2 EIF3D POSTAR2 ENCODE chr18:60242077-60242147
64251 chr6 117861933 117861933 1 + A G SKCM 117861930 + 117861910 117861950 41 TTGTCCCCCAGACATGGCACCAGAGGATAGCCTTGAAGGTG TTGTCCCCCAGACATGGCACCAGGGGATAGCCTTGAAGGTG < 41bp 0.459478034322919 0.710506070941901 0.72952545 0.915768 prediction 0.421012141883801 Functional Gain - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117861930 chr6:117861933 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_124358 0 0 1 PPIG POSTAR2 ENCODE chr6:117861880-117861975
64251 chr5 68728392 68728392 1 + A G STAD 68728389 + 68728369 68728409 41 AGTGGTGACAGACAAAGAGACTCAGAAGTTAATTTCAAGGA AGTGGTGACAGACAAAGAGACTCGGAAGTTAATTTCAAGGA < 41bp 0.50810202174044 0.718605396935497 0.16276446 0.26757044 prediction 0.421006750390115 Functional Gain - MARVELD2 ENSG00000152939 CDS Human protein_coding chr5:68728389 chr5:68728392 synonymous SNV . 0 24 hm5C_associated_SNPs_124360 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714641 chr5:68728370-68728393
64251 chr2 86359497 86359497 1 + C T UCEC 86359496 + 86359476 86359516 41 AGTACATGGCCTTTTAAAAACCGGAGACAACTGGAAATTCA AGTACATGGCCTTTTAAAAACTGGAGACAACTGGAAATTCA < 41bp 0.615046409569724 0.825547644854853 0.29301152 0.1647391 prediction 0.421002470570258 Functional Gain - PTCD3 ENSG00000132300 CDS Human protein_coding chr2:86359496 chr2:86359497 synonymous SNV . 0 22 hm5C_associated_SNPs_124361 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:86359430-86359546
64251 chr19 33587157 33587157 1 + C A SKCM 33587153 + 33587133 33587173 41 GCCTGATAATGTGACCTTTGCACCCAAAGATGTCACACCTG GCCTGATAATGTGACCTTTGCACCAAAAGATGTCACACCTG < 41bp 0.274373113710217 0.710496271295508 0.016121924 0.021529406 prediction 0.420992542591016 Functional Gain - GPATCH1 ENSG00000076650 CDS Human protein_coding chr19:33587153 chr19:33587157 synonymous SNV . 0 25 hm5C_associated_SNPs_124365 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:33587142-33587170
64251 chr16 1825855 1825855 1 + C G rs200300991 1825851 + 1825831 1825871 41 CACAGCAGGGCGCTGGGCAGCCGGCGAGCCAGTGGCAAGAG CACAGCAGGGCGCTGGGCAGCCGGGGAGCCAGTGGCAAGAG < 41bp 0.653638555487768 0.864134371989273 0.26022953 0.8680947 prediction 0.42099163300301 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825851 chr16:1825855 synonymous SNV . 0 25 hm5C_associated_SNPs_124366 0 0 3 FASTKD2 POSTAR2 ENCODE chr16:1825804-1825901
64251 chr14 75475786 75475786 1 + C T HNSC 75475785 + 75475765 75475805 41 CCCTGTGTTTGACTACGTTCCCCCAGAGCTCATTACCCTCT CCCTGTGTTTGACTACGTTCCTCCAGAGCTCATTACCCTCT < 41bp 0.636150747651021 0.846644791717657 0.14447793 0.95208156 prediction 0.420988088133273 Functional Gain - EIF2B2 ENSG00000119718 CDS Human protein_coding chr14:75475785 chr14:75475786 synonymous SNV . 0 22 hm5C_associated_SNPs_124367 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr14:75475755-75475792
64251 chr3 133485235 133485235 1 + C T SKCM 133485234 + 133485214 133485254 41 AGAACCGCTGGCTGGAACATCCCCATGGGCCTGCTCTACAA AGAACCGCTGGCTGGAACATCTCCATGGGCCTGCTCTACAA < 41bp 0.659989119701657 0.870482915823439 0.061850756 0.9785669 prediction 0.420987592243564 Functional Gain - TF ENSG00000091513 CDS Human protein_coding chr3:133485234 chr3:133485235 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_124368 0 0 8 DHX30 POSTAR2 ENCODE chr3:133485161-133485250
64251 chr16 1774612 1774612 1 + C G BLCA 1774611 + 1774591 1774631 41 GAGAAGAAAGAGCTGCAAATCCAGGTGGAGCACTACGAGTT GAGAAGAAAGAGCTGCAAATCGAGGTGGAGCACTACGAGTT < 41bp 0.389793308385773 0.710490026979633 0.91120297 0.9390285 prediction 0.420980053959266 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1774611 chr16:1774612 nonsynonymous SNV 0.267 1 22 hm5C_associated_SNPs_124370 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:1774612-1774613
64251 chr2 219616465 219616465 1 + C T COAD 219616464 + 219616444 219616484 41 GGGACAAATGTCGAATGGCTCCAGAGCATGTCACTGCACAG GGGACAAATGTCGAATGGCTCTAGAGCATGTCACTGCACAG < 41bp 0.619292490012515 0.829781212271709 0.6898838 0.52145725 prediction 0.420977444518387 Functional Gain - TTLL4 ENSG00000135912 CDS Human protein_coding chr2:219616464 chr2:219616465 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_124371 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr2:219616458-219616470
64251 chr17 38421226 38421226 1 + T C SKCM 38421223 + 38421203 38421243 41 CCTGGGGTCCCCAATGGACCCTCTAGCCCCACTAATGAGTC CCTGGGGTCCCCAATGGACCCTCCAGCCCCACTAATGAGTC < 41bp 0.572317891278934 0.782804905770498 0.27046782 0.9194194 prediction 0.420974028983127 Functional Gain - WIPF2 ENSG00000171475 CDS Human protein_coding chr17:38421223 chr17:38421226 synonymous SNV . 0 24 hm5C_associated_SNPs_124372 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350200 chr17:38421214-38421235
64251 chr19 17836641 17836641 1 + C T UCEC 17836640 + 17836620 17836660 41 CACTCCTCCTCCATACAGATCCGGGACATCCTGGCCACCAC CACTCCTCCTCCATACAGATCTGGGACATCCTGGCCACCAC < 41bp 0.561184419948558 0.771669611344865 0.87495005 0.45074266 prediction 0.420970382792613 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836640 chr19:17836641 nonsynonymous SNV 0.041 1 22 hm5C_associated_SNPs_124375 0 0 1 BUD13 POSTAR2 ENCODE chr19:17836574-17836684
64251 chr8 125562116 125562116 1 + C T LUSC 125562115 + 125562095 125562135 41 TGGTATATTGTGACCAGACCCCGGGAGCGGCCCATGTAGAA TGGTATATTGTGACCAGACCCTGGGAGCGGCCCATGTAGAA < 41bp 0.547729351105925 0.758213816938361 0.52614045 0.36802745 prediction 0.420968931664872 Functional Gain - NDUFB9 ENSG00000147684 CDS Human protein_coding chr8:125562115 chr8:125562116 nonsynonymous SNV 0.956 3 22 hm5C_associated_SNPs_124376 0 0 27 TARDBP POSTAR2 DRA001158,DRS012387 chr8:125562004-125562143
64251 chr20 1115859 1115859 1 + C T CESC 1115858 + 1115838 1115878 41 AAAAGGCTAATGTAAGCAGTCCCCACCGGGAGTTCCCCCCT AAAAGGCTAATGTAAGCAGTCTCCACCGGGAGTTCCCCCCT < 41bp 0.647435648015506 0.857914197217001 0.00932315 0.91330945 prediction 0.42095709840299 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1115858 chr20:1115859 nonsynonymous SNV 0.022 0 22 hm5C_associated_SNPs_124379 0 0 8 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr20:1115840-1115860
64251 chr3 17052240 17052240 1 + C T UCEC 17052239 + 17052219 17052259 41 CGAGCTCTTAAAATGGGTTGCCGGAGTGTTGAATTAGATGT CGAGCTCTTAAAATGGGTTGCTGGAGTGTTGAATTAGATGT < 41bp 0.460021528765449 0.710473921689251 0.6300034 0.24844337 prediction 0.420947843378503 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17052239 chr3:17052240 nonsynonymous SNV 0.956 5 22 hm5C_associated_SNPs_124381 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:17052227-17052252
64251 chr19 49686156 49686156 1 + C T SKCM 49686155 + 49686135 49686175 41 GGGGGCGCCTGGGACCCTCACCCAGGCCAGGGCTTCGGGGA GGGGGCGCCTGGGACCCTCACTCAGGCCAGGGCTTCGGGGA < 41bp 0.590867758433292 0.80133239322016 0.11368823 0.06994161 prediction 0.420929269573736 Functional Gain - TRPM4 ENSG00000130529 CDS Human protein_coding chr19:49686155 chr19:49686156 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_124384 0 0 2 SF3B1 POSTAR2 ENCODE chr19:49686151-49686156
64251 chr19 50099959 50099959 1 + C G SKCM 50099955 + 50099935 50099975 41 CCTTCTGGAGGCCGGGGGCCCTGACCTCCCACTGGTGCTGC CCTTCTGGAGGCCGGGGGCCCTGAGCTCCCACTGGTGCTGC < 41bp 0.41750872925342 0.71046179972169 0.5349514 0.846781 prediction 0.42092359944338 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099955 chr19:50099959 nonsynonymous SNV 0.959 0 25 hm5C_associated_SNPs_124386 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50099908-50099967
64251 chr6 126277965 126277965 1 + A G rs561897941 126277962 + 126277942 126277982 41 GGCCTCCGGCTTTGAAGTTCCTCACCGCGTCTCCTTCCCTC GGCCTCCGGCTTTGAAGTTCCTCGCCGCGTCTCCTTCCCTC < 41bp 0.481596838231124 0.710458683342845 0.29746455 0.3686505 prediction 0.42091736668569 Functional Gain - HINT3 ENSG00000111911 UTR5 Human protein_coding chr6:126277962 chr6:126277965 . . 0 24 hm5C_associated_SNPs_124388 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr6:126277956-126277987
64251 chr20 58519515 58519515 1 + C T UCEC 58519514 + 58519494 58519534 41 AACAAAACGGAAGCCGTGCCCCGAGTGGGAGGACTTCTTGG AACAAAACGGAAGCCGTGCCCTGAGTGGGAGGACTTCTTGG < 41bp 0.569079795201462 0.779536379165186 0.38457766 0.20276374 prediction 0.420913167927449 Functional Gain - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519514 chr20:58519515 stopgain 0.000 0 22 hm5C_associated_SNPs_124389 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr20:58519497-58519532
64251 chr12 111884608 111884608 1 + T A rs3184504 111884604 + 111884584 111884624 41 TGCTCCAGCATCCAGGAGGTCCGGTGGTGCACACGGCTTGA TGCTCCAGCATCCAGGAGGTCCGGAGGTGCACACGGCTTGA < 41bp 0.372753480965026 0.710439122555631 0.67311686 0.8554968 prediction 0.420878245111263 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111884604 chr12:111884608 nonsynonymous SNV 0.074 0 25 hm5C_associated_SNPs_124397 0 1 2 BUD13 POSTAR2 ENCODE chr12:111884524-111884611
64251 chr17 79674255 79674255 1 + C T STAD 79674254 + 79674234 79674274 41 CCTGGAGGCGGTGGGCGGCACCGTGGTTCTGGAGTAGCCTC CCTGGAGGCGGTGGGCGGCACTGTGGTTCTGGAGTAGCCTC < 41bp 0.547974800897514 0.758406672739737 0.8515028 0.690721 prediction 0.420863743684447 Functional Gain - MRPL12 ENSG00000262814 CDS Human protein_coding chr17:79674254 chr17:79674255 synonymous SNV . 0 22 hm5C_associated_SNPs_124398 0 0 18 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr17:79674160-79674260
64251 chr11 67352159 67352159 1 + T C LIHC 67352156 + 67352136 67352176 41 AGCCATGCCTCCCCCAACAGCTATACGGGCAGCTCCCCAAG AGCCATGCCTCCCCCAACAGCTACACGGGCAGCTCCCCAAG < 41bp 0.508623800258977 0.719055366851106 0.90380704 0.9142817 prediction 0.420863133184258 Functional Gain - GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67352156 chr11:67352159 nonsynonymous SNV 0.584 3 24 hm5C_associated_SNPs_124399 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67352157-67352243
64251 chrX 48458940 48458940 1 + C T CESC 48458939 + 48458919 48458959 41 TCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGACCCCGA TCTGAGGATGGTCGCTGCATCTGAGAGATCCCTGACCCCGA < 41bp 0.594314456632666 0.804743140759663 0.4352796 0.34728858 prediction 0.420857368253994 Functional Gain - WDR13 ENSG00000101940 CDS Human protein_coding chrX:48458939 chrX:48458940 stopgain 1.000 1 22 hm5C_associated_SNPs_124401 0 0 4 CPSF3 POSTAR2 GSE37401,GSM917669 chrX:48458922-48458943
64251 chr7 79082436 79082436 1 + C A KIRC 79082435 + 79082415 79082455 41 CACGGGGGTCTCGTTCACCTCCAGCAGCAGCTCCTCCGACA CACGGGGGTCTCGTTCACCTCAAGCAGCAGCTCCTCCGACA < 41bp 0.475298783454826 0.710424044976454 0.19443819 0.35239977 prediction 0.420848089952909 Functional Gain - MAGI2 ENSG00000187391 CDS Human protein_coding chr7:79082435 chr7:79082436 synonymous SNV . 0 22 hm5C_associated_SNPs_124402 0 0 1 DDX3X POSTAR2 ENCODE chr7:79082353-79082450
64251 chr19 45412204 45412204 1 + C A rs72654468 45412203 + 45412183 45412223 41 CGCCACTGTGGGCTCCCTGGCCGGCCAGCCGCTACAGGAGC CGCCACTGTGGGCTCCCTGGCAGGCCAGCCGCTACAGGAGC < 41bp 0.606820631966607 0.817218132500352 0.09174469 0.8880236 prediction 0.420795001067491 Functional Gain - APOE ENSG00000130203 CDS Human protein_coding chr19:45412203 chr19:45412204 synonymous SNV . 0 22 hm5C_associated_SNPs_124412 0 0 12 GEMIN5 POSTAR2 ENCODE chr19:45412184-45412249
64251 chr17 42636648 42636648 1 + T C UCEC 42636646 + 42636626 42636666 41 AAATACCTCATGACGCTCATCGTGGGCATCACGTCGGGCTT AAATACCTCATGACGCTCATCGCGGGCATCACGTCGGGCTT < 41bp 0.600712471566275 0.811108881323221 0.8711988 0.9082639 prediction 0.420792819513892 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636646 chr17:42636648 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_124415 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:42636646-42636684
64251 chr12 48360477 48360477 1 + C T GBM 48360476 + 48360456 48360496 41 TTATTTTCAGGTGAATTTTACCGGGAAGGCCGAGATGGGAG TTATTTTCAGGTGAATTTTACTGGGAAGGCCGAGATGGGAG < 41bp 0.594928220344964 0.805314293138097 0.81075954 0.5857915 prediction 0.420772145586265 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48360476 chr12:48360477 synonymous SNV . 0 22 hm5C_associated_SNPs_124420 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:48360460-48360480
64251 chr3 122598138 122598138 1 + C T COAD 122598137 + 122598117 122598157 41 TTGGTTCAACTGGTGCCTTCCCGGGTCGTGTTTGCTCAGTC TTGGTTCAACTGGTGCCTTCCTGGGTCGTGTTTGCTCAGTC < 41bp 0.585862560063745 0.796248166030116 0.5678741 0.30327645 prediction 0.420771211932742 Functional Gain - DIRC2 ENSG00000138463 CDS Human protein_coding chr3:122598137 chr3:122598138 synonymous SNV . 0 22 hm5C_associated_SNPs_124421 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:122598119-122598145
64251 chr3 129009603 129009603 1 + A G STAD 129009600 + 129009580 129009620 41 AGCGATGTCAGGGAACAAACCAGAGGCAGCCATACTTCATC AGCGATGTCAGGGAACAAACCAGGGGCAGCCATACTTCATC < 41bp 0.599398272241935 0.809783070896121 0.44948637 0.9045742 prediction 0.420769597308372 Functional Gain - HMCES ENSG00000183624 CDS Human protein_coding chr3:129009600 chr3:129009603 nonsynonymous SNV 0.591 1 24 hm5C_associated_SNPs_124422 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr3:129009586-129009618
64251 chr3 57543397 57543397 1 + A G COAD 57543394 + 57543374 57543414 41 CAGCGCAGGAGAAGGTGCTCCAGAGATCTTCTGTTCTTCAG CAGCGCAGGAGAAGGTGCTCCAGGGATCTTCTGTTCTTCAG < 41bp 0.580190055299636 0.790571396222011 0.809385 0.8892443 prediction 0.420762681844749 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57543394 chr3:57543397 nonsynonymous SNV 0.995 5 24 hm5C_associated_SNPs_124423 0 0 7 LIN28A POSTAR2 GSE44616,GSM1087848 chr3:57543384-57543406
64251 chr2 204281674 204281674 1 + C A UCEC 204281670 + 204281650 204281690 41 ACCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCTCCCC ACCGCCACCTGTGGAAGAACCAGTATTTGATGAGTCTCCCC < 41bp 0.306658229009979 0.71037988628714 0.21698251 0.118406296 prediction 0.420759772574281 Functional Gain - ABI2 ENSG00000138443 CDS Human protein_coding chr2:204281670 chr2:204281674 synonymous SNV . 0 25 hm5C_associated_SNPs_124424 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr2:204281660-204281680
64251 chr19 10893656 10893656 1 + C T HNSC 10893655 + 10893635 10893675 41 GGCTACATTGGCGTGGTGAACCGCAGCCAGAAGGATATTGA GGCTACATTGGCGTGGTGAACTGCAGCCAGAAGGATATTGA < 41bp 0.565897798028233 0.776277570158605 0.3188577 0.4106804 prediction 0.420759544260743 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10893655 chr19:10893656 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_124425 0 0 16 FXR2 POSTAR2 GSE39682,GSM977620 chr19:10893636-10893657
64251 chr11 93912906 93912906 1 + T A COAD 93912902 + 93912882 93912922 41 ACTCATCATTATACTGTTAGCGTGTATCTACCTGGGCTATT ACTCATCATTATACTGTTAGCGTGAATCTACCTGGGCTATT < 41bp 0.386741980612778 0.710376339385412 0.31476924 0.30861747 prediction 0.420752678770825 Functional Gain - PANX1 ENSG00000110218 CDS Human protein_coding chr11:93912902 chr11:93912906 stopgain 0.035 1 25 hm5C_associated_SNPs_124426 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:93912906-93912929
64251 chr10 70863699 70863699 1 + C G rs4892 70863698 + 70863678 70863718 41 CTCTGGATCAGGCTTCGGCTCCGGCTCCGGCTCTGGATCAG CTCTGGATCAGGCTTCGGCTCGGGCTCCGGCTCTGGATCAG < 41bp 0.679984681147956 0.890359206843912 0.25593227 0.8403413 prediction 0.420749051391913 Functional Gain - SRGN ENSG00000122862 CDS Human protein_coding chr10:70863698 chr10:70863699 synonymous SNV . 0 22 hm5C_associated_SNPs_124429 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:70863680-70863720
64251 chr3 129023640 129023640 1 + C G OV 129023639 + 129023619 129023659 41 AGCGGGAGAAGGAGGAGGAACCTGTGGCCAAGCGTCCTTAC AGCGGGAGAAGGAGGAGGAACGTGTGGCCAAGCGTCCTTAC < 41bp 0.3883107769103 0.710373352893653 0.42596835 0.40376323 prediction 0.420746705787306 Functional Gain - HMCES ENSG00000183624 CDS Human protein_coding chr3:129023639 chr3:129023640 nonsynonymous SNV 0.928 3 22 hm5C_associated_SNPs_124430 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:129023618-129023663
64251 chr15 42861565 42861565 1 + C A rs113922207 42861564 + 42861544 42861584 41 TTGCTGAGAGTGTGGTGTGGCCCAATCTTGACCTCACTGCA TTGCTGAGAGTGTGGTGTGGCACAATCTTGACCTCACTGCA < 41bp 0.578555539217344 0.788924318656891 0.33044612 0.25538978 prediction 0.420737558879094 Functional Gain - HAUS2 ENSG00000261822 ncRNA_exonic Human antisense chr15:42861564 chr15:42861565 . . 0 22 hm5C_associated_SNPs_124432 0 0 2 UPF1 POSTAR2 ENCODE chr15:42861511-42861571
64251 chr12 48359741 48359741 1 + A G UCEC 48359738 + 48359718 48359758 41 GGCATCAAAGTGGTGAAAGTCACATTTAATAAGCAAGACTC GGCATCAAAGTGGTGAAAGTCACGTTTAATAAGCAAGACTC < 41bp 0.581096127925418 0.791456427531992 0.137896 0.1866988 prediction 0.420720599213147 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48359738 chr12:48359741 synonymous SNV . 0 24 hm5C_associated_SNPs_124436 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:48359724-48359742
64251 chr15 91509716 91509716 1 - A G rs535253083 91509718 - 91509698 91509738 41 GGTATGCATGTATGAACACACATGCTTGTCGGAACGCTTTC GGTATGCATGTATGAACACACACGCTTGTCGGAACGCTTTC < 41bp 0.487043321542498 0.710356083908682 0.20823446 0.03653148 prediction 0.420712167817364 Functional Gain - PRC1-AS1 ENSG00000258725 ncRNA_exonic Human antisense chr15:91509718 chr15:91509716 . . 0 23 hm5C_associated_SNPs_124439 0 0 20 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:91509272-91509876
64251 chr3 160152299 160152299 1 + C A rs13403 160152298 + 160152278 160152318 41 CAACTTTATGATAGGTTTATCCGGGTACTAAATGCATTTCA CAACTTTATGATAGGTTTATCAGGGTACTAAATGCATTTCA < 41bp 0.476423967757126 0.71035503542969 0.8958057 0.9141172 prediction 0.420710070859381 Functional Gain - SMC4 ENSG00000113810;ENSG00000213186 UTR3 Human other chr3:160152298 chr3:160152299 . . 0 22 hm5C_associated_SNPs_124440 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:160152284-160152306
64251 chr12 53777167 53777167 1 + C A LUSC 53777163 + 53777143 53777183 41 ACCTCCAAGTTCAGAACCCACAAGCCCAAACAATCACCTTA ACCTCCAAGTTCAGAACCCACAAGACCAAACAATCACCTTA < 41bp 0.299497501030931 0.710354570950088 0.873207 0.27053618 prediction 0.420709141900176 Functional Gain - SP1 ENSG00000185591 CDS Human protein_coding chr12:53777163 chr12:53777167 nonsynonymous SNV 0.997 2 25 hm5C_associated_SNPs_124441 0 0 5 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr12:53777048-53777185
64251 chr19 16980623 16980623 1 + C T GBM 16980622 + 16980602 16980642 41 AGGGGGCCTTCGGGGATGCCCCGGCCACTGAGCAGCCACCC AGGGGGCCTTCGGGGATGCCCTGGCCACTGAGCAGCCACCC < 41bp 0.479774747872683 0.710348814609205 0.90029025 0.61760855 prediction 0.42069762921841 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16980622 chr19:16980623 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_124444 0 0 1 UCHL5 POSTAR2 ENCODE chr19:16980618-16980653
64251 chr1 1417974 1417974 1 + C T HNSC 1417973 + 1417953 1417993 41 TTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCAC TTCCGTGCCTTTGTGACAGACTGGGACAAAGTGACAGCCAC < 41bp 0.454354504967883 0.710348734721791 0.47315136 0.2774626 prediction 0.420697469443583 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417973 chr1:1417974 nonsynonymous SNV 0.980 1 22 hm5C_associated_SNPs_124445 0 0 6 BUD13 POSTAR2 ENCODE chr1:1417951-1418019
64251 chr19 8436324 8436324 1 + C G BLCA 8436323 + 8436303 8436343 41 GGGCGCCACCACCGTCCCACCCAGCGGCCTCTCCGTACCCT GGGCGCCACCACCGTCCCACCGAGCGGCCTCTCCGTACCCT < 41bp 0.385517437170539 0.710334886626074 0.23133194 0.7128589 prediction 0.420669773252147 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8436323 chr19:8436324 synonymous SNV . 0 22 hm5C_associated_SNPs_124451 0 0 1 RPS3 POSTAR2 ENCODE chr19:8436236-8436342
64251 chr2 191524263 191524263 1 + C T STAD 191524262 + 191524242 191524282 41 TATGAAAGGAGTAGCAATGCCCGGGAACCTCATTTAAAAAT TATGAAAGGAGTAGCAATGCCTGGGAACCTCATTTAAAAAT < 41bp 0.605104419008821 0.815426523362605 0.085853994 0.02093786 prediction 0.420644208707568 Functional Gain - NAB1 ENSG00000138386 CDS Human protein_coding chr2:191524262 chr2:191524263 nonsynonymous SNV 0.037 3 22 hm5C_associated_SNPs_124457 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:191524232-191524271
64251 chr7 150746321 150746321 1 + C T UCEC 150746320 + 150746300 150746340 41 GCTGGGTCTGCGCTGCTGGGCCTGGATCCCGCAGAGCACGC GCTGGGTCTGCGCTGCTGGGCTTGGATCCCGCAGAGCACGC < 41bp 0.514701996165472 0.725021994524309 0.121617615 0.049819916 prediction 0.420639996717675 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746320 chr7:150746321 synonymous SNV . 0 22 hm5C_associated_SNPs_124458 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917667 chr7:150746303-150746322
64251 chr9 120476810 120476810 1 + C T SKCM 120476809 + 120476789 120476829 41 CTGGAGTGGGAGGACAGTGTCCTGGGGCGGCACATCTTCTG CTGGAGTGGGAGGACAGTGTCTTGGGGCGGCACATCTTCTG < 41bp 0.571038061789332 0.781344207595482 0.14388308 0.19873008 prediction 0.4206122916123 Functional Gain - TLR4 ENSG00000136869 CDS Human protein_coding chr9:120476809 chr9:120476810 synonymous SNV . 0 22 hm5C_associated_SNPs_124463 0 0 4 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr9:120476800-120476820
64251 chr1 44437948 44437948 1 + T C LUSC 44437946 + 44437926 44437966 41 CCTGGAAGTCATCAAATGATCATGGAAGCTTGGCTCTGACC CCTGGAAGTCATCAAATGATCACGGAAGCTTGGCTCTGACC < 41bp 0.614835626017285 0.825141348544756 0.8638663 0.902557 prediction 0.420611445054941 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44437946 chr1:44437948 synonymous SNV . 0 23 hm5C_associated_SNPs_124464 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:44437938-44437968
64251 chr1 32635621 32635621 1 + A G UCEC 32635618 + 32635598 32635638 41 CAAGAGGGCAAGCGCAGTGGCTCAGGGGTCAATCCTTATTG CAAGAGGGCAAGCGCAGTGGCTCGGGGGTCAATCCTTATTG < 41bp 0.592079566571857 0.802368255252675 0.08981025 0.2465525 prediction 0.420577377361638 Functional Gain - KPNA6 ENSG00000025800 CDS Human protein_coding chr1:32635618 chr1:32635621 synonymous SNV . 0 24 hm5C_associated_SNPs_124469 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:32635534-32635633
64251 chr6 80744831 80744831 1 + A G READ 80744828 + 80744808 80744848 41 ATTTGAATAAACTACAACAACACAGTGATAAGATCATCCGA ATTTGAATAAACTACAACAACACGGTGATAAGATCATCCGA < 41bp 0.516709423377873 0.726997764366801 0.17919698 0.30886775 prediction 0.420576681977855 Functional Gain - TTK ENSG00000112742 CDS Human protein_coding chr6:80744828 chr6:80744831 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_124470 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:80744789-80744854
64251 chrX 151870085 151870085 1 + C A LUAD 151870084 + 151870064 151870104 41 CAGGAAAACTACCTGGAGTACCGGCAGGTCCCCGGCAGTGA CAGGAAAACTACCTGGAGTACAGGCAGGTCCCCGGCAGTGA < 41bp 0.440544885610227 0.710280861311529 0.21598661 0.34144145 prediction 0.420561722623057 Functional Gain - MAGEA6 ENSG00000197172 CDS Human protein_coding chrX:151870084 chrX:151870085 synonymous SNV . 0 22 hm5C_associated_SNPs_124474 0 0 2 RPS3 POSTAR2 ENCODE chrX:151870081-151870113
64251 chr5 61786023 61786023 1 + C G CESC 61786022 + 61786002 61786042 41 GGTTTAAAAACCAGCTTCTTCCAGAATTACAAGTCATTCAC GGTTTAAAAACCAGCTTCTTCGAGAATTACAAGTCATTCAC < 41bp 0.412475932665093 0.710273652775467 0.31129825 0.28215426 prediction 0.420547305550933 Functional Gain - IPO11 ENSG00000086200 CDS Human protein_coding chr5:61786022 chr5:61786023 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_124476 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:61786008-61786041
64251 chr16 19125953 19125953 1 + T A COAD 19125949 + 19125929 19125969 41 CGTTGCTTAAGGTGGCCGTCCTGCTCCTCCTCAGCTATGTC CGTTGCTTAAGGTGGCCGTCCTGCACCTCCTCAGCTATGTC < 41bp 0.380735971103704 0.710272998074271 0.05512625 0.032235116 prediction 0.420545996148542 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19125949 chr16:19125953 nonsynonymous SNV 0.087 2 25 hm5C_associated_SNPs_124477 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:19125943-19126025
64251 chr2 62363131 62363131 1 + C T rs183271251 62363130 + 62363110 62363150 41 CCAAGGTGTCCATGATCCCTCCCCACTGACCTTTTCTAAGA CCAAGGTGTCCATGATCCCTCTCCACTGACCTTTTCTAAGA < 41bp 0.556657389171098 0.766921161864431 0.0032020211 0.9201305 prediction 0.420527545386666 Functional Gain - COMMD1 ENSG00000229839 ncRNA_intronic Human antisense chr2:62363130 chr2:62363131 . . 0 22 hm5C_associated_SNPs_124480 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:62363035-62363149
64251 chr5 154254888 154254888 1 + T C UCEC 154254885 + 154254865 154254905 41 AGCATTGATGATGCCAAGTACTGTGGGCGGCTCTATGGCTT AGCATTGATGATGCCAAGTACTGCGGGCGGCTCTATGGCTT < 41bp 0.546089102353172 0.756340757060922 0.31299263 0.3970526 prediction 0.420503309415499 Functional Gain - CNOT8 ENSG00000155508 CDS Human protein_coding chr5:154254885 chr5:154254888 synonymous SNV . 0 24 hm5C_associated_SNPs_124485 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:154254852-154254890
64251 chr11 64878928 64878928 1 + T C SKCM 64878925 + 64878905 64878945 41 GCCACTTTCTGCAGCTCTACCTGTGGCGTTTTGTGGCCGAC GCCACTTTCTGCAGCTCTACCTGCGGCGTTTTGTGGCCGAC < 41bp 0.508155421362233 0.718405990068486 0.55736804 0.7772548 prediction 0.420501137412506 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64878925 chr11:64878928 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_124486 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr11:64878912-64878937
64251 chr2 27887996 27887996 1 + C T COAD 27887995 + 27887975 27888015 41 GGAAGACCGAGAGGCAGAATCCGAGTTAACAGTAACACAGT GGAAGACCGAGAGGCAGAATCTGAGTTAACAGTAACACAGT < 41bp 0.460695771317105 0.710246571796392 0.87141585 0.69866353 prediction 0.420493143592784 Functional Gain - SLC4A1AP ENSG00000163798 CDS Human protein_coding chr2:27887995 chr2:27887996 synonymous SNV . 0 22 hm5C_associated_SNPs_124487 0 0 2 GRWD1 POSTAR2 ENCODE chr2:27887964-27888022
64251 chr20 11903534 11903534 1 + T C UCEC 11903531 + 11903511 11903551 41 CTCAAGTCTGAGGGATTCTGCGATATTGACTTCCAGACACT CTCAAGTCTGAGGGATTCTGCGACATTGACTTCCAGACACT < 41bp 0.514193172357805 0.724437665274602 0.56250536 0.69389606 prediction 0.420488985833594 Functional Gain - BTBD3 ENSG00000132640 CDS Human protein_coding chr20:11903531 chr20:11903534 synonymous SNV . 0 24 hm5C_associated_SNPs_124489 0 0 9 PTBP1 POSTAR2 GSE42701,GSM1048186 chr20:11903520-11903540
64251 chr5 140476230 140476230 1 + T C rs149802008 140476228 + 140476208 140476248 41 ACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACAATGGCGA ACGGAGCCCGGGCTGTTCGGCGCGTGGGCGCACAATGGCGA < 41bp 0.586070983402904 0.796314742472973 0.64242256 0.6999072 prediction 0.42048751814014 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140476228 chr5:140476230 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_124490 0 0 2 SND1 POSTAR2 ENCODE chr5:140476219-140476302
64251 chr11 65408505 65408505 1 + C T UCEC 65408504 + 65408484 65408524 41 CAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGG CAGCAAGGCCCCCGCTGACACTGCACACCTTCGAGCCGAGG < 41bp 0.461656714865756 0.710242540779365 0.05163011 0.069357485 prediction 0.42048508155873 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408504 chr11:65408505 nonsynonymous SNV 0.891 2 22 hm5C_associated_SNPs_124491 0 0 2 RBM15 POSTAR2 ENCODE chr11:65408458-65408506
64251 chr12 53670886 53670886 1 + C T STAD 53670885 + 53670865 53670905 41 AGCTCTGCTCTGGATGCTATCCGGGAAGCCCTGCAGCTTCT AGCTCTGCTCTGGATGCTATCTGGGAAGCCCTGCAGCTTCT < 41bp 0.59639655041357 0.80663799852861 0.92546 0.91080946 prediction 0.42048289623008 Functional Gain - ESPL1 ENSG00000135476 CDS Human protein_coding chr12:53670885 chr12:53670886 nonsynonymous SNV 0.987 2 22 hm5C_associated_SNPs_124492 0 0 1 FMR1 POSTAR2 ENCODE chr12:53670885-53670940
64251 chr8 25230091 25230091 1 + C T DLBC 25230090 + 25230070 25230110 41 TCCAGGCTCCTAGAACATTGCCGGAAACACAAATACCTCTC TCCAGGCTCCTAGAACATTGCTGGAAACACAAATACCTCTC < 41bp 0.570480431897004 0.780719027854292 0.83984184 0.30167675 prediction 0.420477191914576 Functional Gain - DOCK5 ENSG00000147459 CDS Human protein_coding chr8:25230090 chr8:25230091 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124493 0 0 1 U2AF2 POSTAR2 ENCODE chr8:25230035-25230093
64251 chr19 42799175 42799175 1 + C T rs547998314 42799174 + 42799154 42799194 41 CCCTGCCCCCACTCCCAGCCCCGCAGGGGGCCCTGACCCCA CCCTGCCCCCACTCCCAGCCCTGCAGGGGGCCCTGACCCCA < 41bp 0.612748137720365 0.822985827382462 0.21092737 0.25061536 prediction 0.420475379324195 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42799174 chr19:42799175 synonymous SNV . 0 22 hm5C_associated_SNPs_124494 0 0 5 DDX55 POSTAR2 ENCODE chr19:42799117-42799195
64251 chr8 86386602 86386602 1 + T C UCEC 86386599 + 86386579 86386619 41 ATATGGGGATTTTGGGAAAGCTGTGCAGCAACCTGATGGAC ATATGGGGATTTTGGGAAAGCTGCGCAGCAACCTGATGGAC < 41bp 0.528755890154556 0.738992935919092 0.2581008 0.20650348 prediction 0.420474091529072 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86386599 chr8:86386602 nonsynonymous SNV 0.803 1 24 hm5C_associated_SNPs_124495 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:86386578-86386629
64251 chr10 6263702 6263702 1 + C A COAD 6263701 + 6263681 6263721 41 GTACTATTACCGCTACCCCACCGGGGAGGTGAGCGCAGGCT GTACTATTACCGCTACCCCACAGGGGAGGTGAGCGCAGGCT < 41bp 0.448154676195993 0.710223230402979 0.8075962 0.8919957 prediction 0.420446460805958 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6263701 chr10:6263702 synonymous SNV . 0 22 hm5C_associated_SNPs_124503 0 0 1 PPIG POSTAR2 ENCODE chr10:6263601-6263718
64251 chr9 131050939 131050939 1 + C T COAD 131050938 + 131050918 131050958 41 TCCTTCCTTTCAGCTGTGATCCGAGGTGTCACCACCAAAGA TCCTTCCTTTCAGCTGTGATCTGAGGTGTCACCACCAAAGA < 41bp 0.487683910089525 0.710222194352308 0.94467294 0.8209641 prediction 0.420444388704615 Functional Gain - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131050938 chr9:131050939 stopgain 0.918 1 22 hm5C_associated_SNPs_124505 0 0 1 SND1 POSTAR2 ENCODE chr9:131050932-131050993
64251 chr11 119170269 119170269 1 + T G UCEC 119170266 + 119170246 119170286 41 CCATTCCCGCGGAGAATCAACTCTGAACGGAAAGCTGGCAG CCATTCCCGCGGAGAATCAACTCGGAACGGAAAGCTGGCAG < 41bp 0.324037229887724 0.710200190310816 0.27652755 0.53067654 prediction 0.420400380621632 Functional Gain - CBL ENSG00000110395 CDS Human protein_coding chr11:119170266 chr11:119170269 synonymous SNV . 0 24 hm5C_associated_SNPs_124512 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:119170236-119170278
64251 chrX 149931146 149931146 1 + T C BLCA 149931144 + 149931124 149931164 41 CACGCGCGCCGTCTCATCCTCATCTGAGCGGGGCTCCTCGC CACGCGCGCCGTCTCATCCTCACCTGAGCGGGGCTCCTCGC < 41bp 0.454210300754038 0.710199895577573 0.3684533 0.28449523 prediction 0.420399791155147 Functional Gain - MTMR1 ENSG00000063601 CDS Human protein_coding chrX:149931144 chrX:149931146 nonsynonymous SNV 0.127 2 23 hm5C_associated_SNPs_124513 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334287 chrX:149931142-149931163
64251 chr17 7606401 7606401 1 + C T rs35082161 7606400 + 7606380 7606420 41 CAATGATGGGAAGCCGGAGCCCGTGTTGAGTTTTCTGCCCC CAATGATGGGAAGCCGGAGCCTGTGTTGAGTTTTCTGCCCC < 41bp 0.463308534029076 0.710192961633898 0.33770603 0.2439563 prediction 0.420385923267795 Functional Gain - WRAP53 ENSG00000141499 CDS Human protein_coding chr17:7606400 chr17:7606401 synonymous SNV . 0 22 hm5C_associated_SNPs_124515 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7606389-7606409
64251 chr17 48046960 48046960 1 + C G rs143763914 48046959 + 48046939 48046979 41 CCCCTACAACCGCAGCCTCCCCCAATTTGTCCTACTCCAGG CCCCTACAACCGCAGCCTCCCGCAATTTGTCCTACTCCAGG < 41bp 0.377962179804535 0.710190756422863 0.08319953 0.19903845 prediction 0.420381512845726 Functional Gain - DLX4 ENSG00000108813 CDS Human protein_coding chr17:48046959 chr17:48046960 nonsynonymous SNV 0.761 2 22 hm5C_associated_SNPs_124516 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:48046955-48046978
64251 chr2 8822498 8822498 1 + T C UCEC 8822496 + 8822476 8822516 41 AAGATGGAAATCCTGCAGCACGTCATCGACTACATCTTGGA AAGATGGAAATCCTGCAGCACGCCATCGACTACATCTTGGA < 41bp 0.430443174366617 0.710186862220756 0.12589815 0.20459813 prediction 0.420373724441512 Functional Gain - ID2 ENSG00000115738 CDS Human protein_coding chr2:8822496 chr2:8822498 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_124517 0 0 1 UCHL5 POSTAR2 ENCODE chr2:8822488-8822620
64251 chr5 122153040 122153040 1 + T C COAD 122153037 + 122153017 122153057 41 CAACTTAGGAAACTTCATGTCAGTGTTGAAGCCTTGGTCTG CAACTTAGGAAACTTCATGTCAGCGTTGAAGCCTTGGTCTG < 41bp 0.495634369449764 0.710184378803203 0.025288045 0.074679464 prediction 0.420368757606407 Functional Gain - SNX2 ENSG00000205302 CDS Human protein_coding chr5:122153037 chr5:122153040 synonymous SNV . 0 24 hm5C_associated_SNPs_124518 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:122152989-122153056
64251 chr15 41641419 41641419 1 + C T STAD 41641418 + 41641398 41641438 41 AGGAGAAGGTGCAAGACTGTCCGTGTGGACCCTGACTCACA AGGAGAAGGTGCAAGACTGTCTGTGTGGACCCTGACTCACA < 41bp 0.468735098364869 0.710177847292292 0.2763759 0.3068544 prediction 0.420355694584583 Functional Gain - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41641418 chr15:41641419 nonsynonymous SNV 0.001 1 22 hm5C_associated_SNPs_124521 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:41641396-41641435
64251 chr16 28885175 28885175 1 + C G rs141596379 28885174 + 28885154 28885194 41 CGCTCCACCCTTTTTAAACCCCCCAGCCCTGCTCGTGAGAT CGCTCCACCCTTTTTAAACCCGCCAGCCCTGCTCGTGAGAT < 41bp 0.409239622184519 0.710174206918852 0.036939472 0.12353358 prediction 0.420348413837703 Functional Gain - SH2B1 ENSG00000178188 UTR3 Human protein_coding chr16:28885174 chr16:28885175 . . 0 22 hm5C_associated_SNPs_124523 0 0 5 FUS POSTAR2 SRX029328 chr16:28885155-28885179
64251 chr19 44469186 44469186 1 + C T STAD 44469185 + 44469165 44469205 41 CCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTAGAGAA CCTGCCCAGAGGAAGCTGTACTGAGATGTGATGCTAGAGAA < 41bp 0.606697211423674 0.816867415356478 0.10276541 0.17850992 prediction 0.420340407865607 Functional Gain - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44469185 chr19:44469186 stopgain 0.994 0 22 hm5C_associated_SNPs_124524 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:44469173-44469201
64251 chrX 54837342 54837342 1 + T C STAD 54837339 + 54837319 54837359 41 TGGCCGAAGGGTCTCAAAGGCCCTAATGGCCTCAATGGCCC TGGCCGAAGGGTCTCAAAGGCCCCAATGGCCTCAATGGCCC < 41bp 0.552371924632442 0.762535062462414 0.07818183 0.052361965 prediction 0.420326275659944 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54837339 chrX:54837342 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_124527 0 0 1 ZNF622 POSTAR2 ENCODE chrX:54837264-54837343
64251 chr5 156741444 156741444 1 + C T OV 156741443 + 156741423 156741463 41 GCGGGGTCTGCAGCTTCTATCCAAGTGGAGCGCCCACGTCA GCGGGGTCTGCAGCTTCTATCTAAGTGGAGCGCCCACGTCA < 41bp 0.456243469488674 0.710161505406162 0.92811906 0.8895247 prediction 0.420323010812324 Functional Gain - CYFIP2 ENSG00000055163 CDS Human protein_coding chr5:156741443 chr5:156741444 synonymous SNV . 0 22 hm5C_associated_SNPs_124528 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:156741423-156741447
64251 chr16 68380178 68380178 1 + A G UCEC 68380175 + 68380155 68380195 41 CTGATCGATACGTCCAGGCTCTGAGGACCGTAAGTGTCCAG CTGATCGATACGTCCAGGCTCTGGGGACCGTAAGTGTCCAG < 41bp 0.592592930969078 0.802750295534907 0.10874134 0.36939126 prediction 0.420314729131658 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68380175 chr16:68380178 nonsynonymous SNV 0.953 0 24 hm5C_associated_SNPs_124531 0 0 6 DDX24 POSTAR2 ENCODE chr16:68380052-68380182
64251 chr13 114294439 114294439 1 + C T HNSC 114294438 + 114294418 114294458 41 CGCCTCCTGCCTTGCAGTGACCTGACCAACGGTGCAGATGG CGCCTCCTGCCTTGCAGTGACTTGACCAACGGTGCAGATGG < 41bp 0.456464018728582 0.710154449466317 0.4030153 0.3351984 prediction 0.420308898932634 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114294438 chr13:114294439 synonymous SNV . 0 22 hm5C_associated_SNPs_124532 0 0 1 BUD13 POSTAR2 ENCODE chr13:114294417-114294465
64251 chr22 29695662 29695662 1 + C T COAD 29695661 + 29695641 29695681 41 CCTCATGGATCGTGGTGGTCCCGGTGGAATGTTCAGAGGTG CCTCATGGATCGTGGTGGTCCTGGTGGAATGTTCAGAGGTG < 41bp 0.593919785010252 0.804068378645849 0.47372404 0.4629758 prediction 0.420297187271194 Functional Gain - EWSR1 ENSG00000182944 CDS Human protein_coding chr22:29695661 chr22:29695662 synonymous SNV . 0 22 hm5C_associated_SNPs_124534 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819213 chr22:29695600-29695680
64251 chr16 30096328 30096328 1 + C T SKCM 30096327 + 30096307 30096347 41 TCATCATCTTTGAGGCTGCTCCCCAAGAGACACGGGGCATC TCATCATCTTTGAGGCTGCTCTCCAAGAGACACGGGGCATC < 41bp 0.631093675724508 0.841229145924288 0.19797248 0.95645523 prediction 0.420270940399561 Functional Gain - PPP4C ENSG00000149923 CDS Human protein_coding chr16:30096327 chr16:30096328 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_124539 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30096210-30096333
64251 chr16 78012933 78012933 1 + A G rs146213276 78012930 + 78012910 78012950 41 CTTTGTGTTCTGAAAAACATCAGAGGGATTTTACATTGCCC CTTTGTGTTCTGAAAAACATCAGGGGGATTTTACATTGCCC < 41bp 0.579189968697349 0.789316564239751 0.89821225 0.9232019 prediction 0.420253191084803 Functional Gain - VAT1L ENSG00000171724 UTR3 Human protein_coding chr16:78012930 chr16:78012933 . . 0 24 hm5C_associated_SNPs_124544 0 0 1 MBNL2 POSTAR2 GSE68890,GSM1685423 chr16:78012927-78012948
64251 chr1 220804450 220804450 1 + C T SARC 220804449 + 220804429 220804469 41 AGCCATATACTGAGCCTGATCCGGATTTCAATGACACAAAA AGCCATATACTGAGCCTGATCTGGATTTCAATGACACAAAA < 41bp 0.614156646364553 0.824277312203126 0.6294719 0.27836543 prediction 0.420241331677147 Functional Gain - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220804449 chr1:220804450 nonsynonymous SNV 0.852 0 22 hm5C_associated_SNPs_124545 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:220804383-220804457
64251 chr16 46934625 46934625 1 + T G STAD 46934621 + 46934601 46934641 41 CACTATGCACCTACCCAAACCTGCTGGACAGCCCCAGCTTC CACTATGCACCTACCCAAACCTGCGGGACAGCCCCAGCTTC < 41bp 0.505545149673297 0.715656235508026 0.1251865 0.30757302 prediction 0.420222171669459 Functional Gain - GPT2 ENSG00000166123 CDS Human protein_coding chr16:46934621 chr16:46934625 nonsynonymous SNV 0.934 2 25 hm5C_associated_SNPs_124549 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:46934603-46934630
64251 chr6 107811866 107811866 1 + A G KIRC 107811863 + 107811843 107811883 41 GGAGACCTCCCGAAAATAAACGGAGCAGGAAGCCGGCTCAC GGAGACCTCCCGAAAATAAACGGGGCAGGAAGCCGGCTCAC < 41bp 0.483122732038692 0.710110724841784 0.8912468 0.9000032 prediction 0.420221449683567 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107811863 chr6:107811866 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_124550 0 0 1 BUD13 POSTAR2 ENCODE chr6:107811847-107811950
64251 chr17 7577581 7577581 1 - A G COAD 7577584 - 7577564 7577604 41 GCTCTGACTGTACCACCATCCACTACAACTACATGTGTAAC GCTCTGACTGTACCACCATCCACCACAACTACATGTGTAAC < 41bp 0.519379769849923 0.729487060342233 0.21318552 0.0077467263 prediction 0.420214580984621 Functional Gain - TP53 ENSG00000141510 CDS Human protein_coding chr17:7577584 chr17:7577581 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_124552 15 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:7577567-7577594
64251 chr19 3535321 3535321 1 + C T rs189069661 3535320 + 3535300 3535340 41 CATGTCAAACCCAAGACCAGCCCCAAGGCCAGACCAAGGCA CATGTCAAACCCAAGACCAGCTCCAAGGCCAGACCAAGGCA < 41bp 0.574342325147391 0.784445913021587 0.043950826 0.8803757 prediction 0.420207175748391 Functional Gain - FZR1 ENSG00000105325 UTR3 Human protein_coding chr19:3535320 chr19:3535321 . . 0 22 hm5C_associated_SNPs_124554 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr19:3535320-3535340
64251 chr3 32933066 32933066 1 + C A COAD 32933062 + 32933042 32933082 41 CTTTCTGGGCTCGGAGGGCACAGGCAATGGGCAGTTCCTGC CTTTCTGGGCTCGGAGGGCACAGGAAATGGGCAGTTCCTGC < 41bp 0.726572452181258 0.936666317985835 0.7244291 0.8955493 prediction 0.420187731609155 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32933062 chr3:32933066 synonymous SNV . 0 25 hm5C_associated_SNPs_124557 0 0 4 DDX6 POSTAR2 ENCODE chr3:32933013-32933080
64251 chr6 72003267 72003267 1 + T C UCEC 72003265 + 72003245 72003285 41 GATATCCGATATCAAAATGACTTGAGCAATCTTCGTTTTTA GATATCCGATATCAAAATGACTCGAGCAATCTTCGTTTTTA < 41bp 0.413471368875676 0.710084405502285 0.0916875 0.14407605 prediction 0.42016881100457 Functional Gain - OGFRL1 ENSG00000119900 CDS Human protein_coding chr6:72003265 chr6:72003267 nonsynonymous SNV 0.999 2 23 hm5C_associated_SNPs_124559 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:72003235-72003272
64251 chr13 24242173 24242173 1 + C T PAAD 24242172 + 24242152 24242192 41 AGGAGGCCTGCAGCCCCAACCCGGCGACTCTTGGTTGTGGG AGGAGGCCTGCAGCCCCAACCTGGCGACTCTTGGTTGTGGG < 41bp 0.456973521488194 0.710083027573796 0.7019714 0.35008216 prediction 0.420166055147592 Functional Gain - TNFRSF19 ENSG00000127863 CDS Human protein_coding chr13:24242172 chr13:24242173 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_124560 0 0 4 RPS3 POSTAR2 ENCODE chr13:24242116-24242184
64251 chr20 61299185 61299185 1 + T G LGG 61299181 + 61299161 61299201 41 GAACACTACAGCCCTGTGTGCGGCTCGGACGGCCTCATGTA GAACACTACAGCCCTGTGTGCGGCGCGGACGGCCTCATGTA < 41bp 0.52559408023507 0.73567527600659 0.31025684 0.7215914 prediction 0.420162391543041 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61299181 chr20:61299185 nonsynonymous SNV 0.036 0 25 hm5C_associated_SNPs_124563 0 0 2 GRWD1 POSTAR2 ENCODE chr20:61299118-61299186
64251 chr15 34520011 34520011 1 + T C KIRC 34520009 + 34519989 34520029 41 TATGATGGTGTGTATGATGGCCTGGCGACCCATTCAGGCAC TATGATGGTGTGTATGATGGCCCGGCGACCCATTCAGGCAC < 41bp 0.451597752915098 0.710075493180053 0.33466375 0.36489534 prediction 0.420150986360107 Functional Gain - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34520009 chr15:34520011 nonsynonymous SNV 0.999 3 23 hm5C_associated_SNPs_124566 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr15:34519966-34520015
64251 chr9 131016963 131016963 1 + T C ESCA 131016961 + 131016941 131016981 41 GTCAGGCAAGTCCATCCCGTCCTGAGAGCCCCAGGCCCCCC GTCAGGCAAGTCCATCCCGTCCCGAGAGCCCCAGGCCCCCC < 41bp 0.602086815420363 0.812160521642195 0.0898993 0.104497224 prediction 0.420147412443664 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131016961 chr9:131016963 synonymous SNV . 0 23 hm5C_associated_SNPs_124567 0 0 2 HNRNPK POSTAR2 ENCODE chr9:131016902-131016986
64251 chr15 41763545 41763545 1 + C T BLCA 41763544 + 41763524 41763564 41 CACAACAGCAAACCAGTTTACCGGGTTGGTATTTCTTCCCT CACAACAGCAAACCAGTTTACTGGGTTGGTATTTCTTCCCT < 41bp 0.594897714683027 0.80496717524542 0.7168995 0.28434718 prediction 0.420138921124785 Functional Gain - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41763544 chr15:41763545 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_124569 0 0 2 LARP4 POSTAR2 ENCODE chr15:41763508-41763571
64251 chr10 1130477 1130477 1 + C T rs145160560 1130476 + 1130456 1130496 41 GGTGCTCGGGACTGCATCAGCCGGTGAGTCGCACACGGACC GGTGCTCGGGACTGCATCAGCTGGTGAGTCGCACACGGACC < 41bp 0.579371158681552 0.789440497777654 0.914744 0.91532445 prediction 0.420138678192203 Functional Gain - WDR37 ENSG00000047056 CDS Human protein_coding chr10:1130476 chr10:1130477 synonymous SNV . 0 22 hm5C_associated_SNPs_124570 0 0 7 BUD13 POSTAR2 ENCODE chr10:1130390-1130485
64251 chr3 119528984 119528984 1 + C G LUSC 119528980 + 119528960 119529000 41 TGCGAGATCACCCGGAAGACCCGGCGACAGTGCCAGGCCTG TGCGAGATCACCCGGAAGACCCGGGGACAGTGCCAGGCCTG < 41bp 0.67306300016431 0.883128695135773 0.894799 0.9171239 prediction 0.420131389942926 Functional Gain - NR1I2 ENSG00000144852 CDS Human protein_coding chr3:119528980 chr3:119528984 nonsynonymous SNV 0.980 5 25 hm5C_associated_SNPs_124573 0 0 2 GRWD1 POSTAR2 ENCODE chr3:119528910-119529022
64251 chr5 140037231 140037231 1 + T G LUAD 140037229 + 140037209 140037249 41 AGGGAACCCGTAACAAGAAGCTTAAGAAGAAGGATAAAGGT AGGGAACCCGTAACAAGAAGCTGAAGAAGAAGGATAAAGGT < 41bp 0.370531485401672 0.71005856480632 0.10693899 0.6448289 prediction 0.420117129612641 Functional Gain - IK ENSG00000113141 CDS Human protein_coding chr5:140037229 chr5:140037231 synonymous SNV . 0 23 hm5C_associated_SNPs_124576 0 0 2 GRWD1 POSTAR2 ENCODE chr5:140037188-140037237
64251 chr16 31089890 31089890 1 + C T SKCM 31089889 + 31089869 31089909 41 GAGAGGGATGAGACCCATTTCCAGGGTGATAAAGAGAGCGG GAGAGGGATGAGACCCATTTCTAGGGTGATAAAGAGAGCGG < 41bp 0.488102945514698 0.710031400845444 0.8951713 0.5853524 prediction 0.420062801690889 Functional Gain - ZNF646 ENSG00000167395 CDS Human protein_coding chr16:31089889 chr16:31089890 stopgain 0.497 0 22 hm5C_associated_SNPs_124586 0 0 1 SLTM POSTAR2 ENCODE chr16:31089876-31089922
64251 chr14 24877667 24877667 1 + T G LUAD 24877665 + 24877645 24877685 41 AATTCAAAGAGATTATCTAGCCTGGGAGCCACTGGGTCCCT AATTCAAAGAGATTATCTAGCCGGGGAGCCACTGGGTCCCT < 41bp 0.347084603630935 0.710023372169824 0.122773945 0.89359045 prediction 0.420046744339648 Functional Gain - NYNRIN ENSG00000205978 CDS Human protein_coding chr14:24877665 chr14:24877667 nonsynonymous SNV 0.065 0 23 hm5C_associated_SNPs_124588 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24877658-24877693
64251 chr4 129120613 129120613 1 + T C COAD 129120611 + 129120591 129120631 41 CAGCACTTCAAATGCTTCACCTTCAGAAGGCGCACCACTAG CAGCACTTCAAATGCTTCACCTCCAGAAGGCGCACCACTAG < 41bp 0.41097509103157 0.709998808547815 0.21596208 0.9472314 prediction 0.41999761709563 Functional Gain - LARP1B ENSG00000138709 CDS Human protein_coding chr4:129120611 chr4:129120613 nonsynonymous SNV 0.997 4 23 hm5C_associated_SNPs_124604 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:129120593-129120616
64251 chr11 67375885 67375885 1 + T C rs374675316 67375883 + 67375863 67375903 41 CTAGACAGCACCCAAGAAAACCTCATTTGGCTCGCTGAAGG CTAGACAGCACCCAAGAAAACCCCATTTGGCTCGCTGAAGG < 41bp 0.419248869169497 0.709998700981486 0.17526168 0.079646856 prediction 0.419997401962972 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67375883 chr11:67375885 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_124605 0 0 20 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:67375860-67375900
64251 chr3 48309810 48309810 1 + C T SKCM 48309809 + 48309789 48309829 41 TTTCCAAGAGGGCAGAAACCCCAGGGTTTGGAGCAGTCACG TTTCCAAGAGGGCAGAAACCCTAGGGTTTGGAGCAGTCACG < 41bp 0.548776595820748 0.758775044669515 0.8804058 0.6915672 prediction 0.419996897697534 Functional Gain - ZNF589 ENSG00000164048 CDS Human protein_coding chr3:48309809 chr3:48309810 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_124606 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr3:48309714-48309813
64251 chr14 20925163 20925163 1 + T C LIHC 20925161 + 20925141 20925181 41 TTTCTATAGGCGATGAGGAGCATGATCAGGAAGGCCGGGTG TTTCTATAGGCGATGAGGAGCACGATCAGGAAGGCCGGGTG < 41bp 0.641246020127224 0.851240417565163 0.24672318 0.23769355 prediction 0.419988794875877 Functional Gain - APEX1 ENSG00000100823 CDS Human protein_coding chr14:20925161 chr14:20925163 synonymous SNV . 0 23 hm5C_associated_SNPs_124608 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:20925147-20925188
64251 chr2 231937111 231937111 1 + C T UCEC 231937110 + 231937090 231937130 41 CCACTAATACGGGTACTGTTCCGGGATCAGAGAAAGACAGG CCACTAATACGGGTACTGTTCTGGGATCAGAGAAAGACAGG < 41bp 0.595121652853321 0.805115460747032 0.89370006 0.7974948 prediction 0.419987615787423 Functional Gain - PSMD1 ENSG00000173692 CDS Human protein_coding chr2:231937110 chr2:231937111 nonsynonymous SNV 0.984 2 22 hm5C_associated_SNPs_124610 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:231937069-231937111
64251 chr1 150933590 150933590 1 + C T STAD 150933589 + 150933569 150933609 41 GAGGGCCGGGCTGGGGGAAGCCGAATGGAGGCTGAGAAGGC GAGGGCCGGGCTGGGGGAAGCTGAATGGAGGCTGAGAAGGC < 41bp 0.610181991093367 0.820169353618216 0.72160053 0.8485927 prediction 0.419974725049697 Functional Gain - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150933589 chr1:150933590 stopgain 0.865 0 22 hm5C_associated_SNPs_124613 0 0 5 CDC40 POSTAR2 ENCODE chr1:150933578-150933673
64251 chr9 130550650 130550650 1 + C T UCEC 130550649 + 130550629 130550669 41 TGACACTCTGGTACCGGCCCCCGGAGCTGTTGCTCGGTGAG TGACACTCTGGTACCGGCCCCTGGAGCTGTTGCTCGGTGAG < 41bp 0.604786000487898 0.814770265691968 0.83027387 0.5138045 prediction 0.41996853040814 Functional Gain - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550649 chr9:130550650 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_124614 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr9:130550621-130550655
64251 chr4 3449225 3449225 1 + C T SKCM 3449224 + 3449204 3449244 41 GCCCCCCTTGCACAGCCCCCCCAGGGACAGCGTCTCCGTGG GCCCCCCTTGCACAGCCCCCCTAGGGACAGCGTCTCCGTGG < 41bp 0.574292732862371 0.784271047663115 0.181813 0.087064624 prediction 0.41995662960149 Functional Gain - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3449224 chr4:3449225 synonymous SNV . 0 22 hm5C_associated_SNPs_124619 0 0 3 GRWD1 POSTAR2 ENCODE chr4:3449218-3449234
64251 chr1 236925896 236925896 1 + C A LUSC 236925892 + 236925872 236925912 41 GATTACGCTGCGTTCTCTTCCGCACTCTACGGGGAGAGCGA GATTACGCTGCGTTCTCTTCCGCAATCTACGGGGAGAGCGA < 41bp 0.30331076222956 0.709970286619031 0.24936193 0.29437414 prediction 0.419940573238063 Functional Gain - ACTN2 ENSG00000077522 CDS Human protein_coding chr1:236925892 chr1:236925896 nonsynonymous SNV 0.745 3 25 hm5C_associated_SNPs_124625 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:236925872-236925916
64251 chr2 96072702 96072702 1 + C T SKCM 96072701 + 96072681 96072721 41 CTCTACAGAGCCCTGGCTGCCCAGTTGCCAGTCCTACCACG CTCTACAGAGCCCTGGCTGCCTAGTTGCCAGTCCTACCACG < 41bp 0.469601647467129 0.709968912305745 0.41024187 0.40330103 prediction 0.419937824611489 Functional Gain - FAHD2A ENSG00000115042 CDS Human protein_coding chr2:96072701 chr2:96072702 stopgain 0.982 0 22 hm5C_associated_SNPs_124628 0 0 1 BUD13 POSTAR2 ENCODE chr2:96072668-96072763
64251 chrX 153608120 153608120 1 + C A rs782051850 153608119 + 153608099 153608139 41 GAGGCGGCGGCTCTCGCCCCCCAGCTCGTCCGCCGCCTCCT GAGGCGGCGGCTCTCGCCCCCAAGCTCGTCCGCCGCCTCCT < 41bp 0.441716869926239 0.709962292365329 0.054510653 0.79268056 prediction 0.419924584730657 Functional Gain - EMD ENSG00000102119 CDS Human protein_coding chrX:153608119 chrX:153608120 synonymous SNV . 0 22 hm5C_associated_SNPs_124629 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:153608091-153608146
64251 chr1 16095092 16095092 1 + C T SKCM 16095091 + 16095071 16095111 41 GAGGAAGAGCTGCCACCTCCCCCGGCAGAACCTGTTGAGAA GAGGAAGAGCTGCCACCTCCCTCGGCAGAACCTGTTGAGAA < 41bp 0.623281530553443 0.833241538898121 0.064371616 0.012141317 prediction 0.419920016689357 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16095091 chr1:16095092 nonsynonymous SNV 0.026 2 22 hm5C_associated_SNPs_124631 0 0 1 PPIG POSTAR2 ENCODE chr1:16095027-16095110
64251 chr3 51733574 51733574 1 + C A UCEC 51733573 + 51733553 51733593 41 GCTTGTGGAGGCCATTGACACCCAGGTGGATGGCACAGGTA GCTTGTGGAGGCCATTGACACACAGGTGGATGGCACAGGTA < 41bp 0.620316982474991 0.830262499556574 0.03365782 0.16052279 prediction 0.419891034163166 Functional Gain - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51733573 chr3:51733574 synonymous SNV . 0 22 hm5C_associated_SNPs_124636 0 0 2 DGCR8 POSTAR2 ENCODE chr3:51733574-51733619
64251 chr1 15978331 15978331 1 + C T rs150526409 15978330 + 15978310 15978350 41 CTGGAAGAGAGGATGTACGGCCAGAGGAGATTGCAGACCAA CTGGAAGAGAGGATGTACGGCTAGAGGAGATTGCAGACCAA < 41bp 0.624898070017875 0.834842296744797 0.5888119 0.39800805 prediction 0.419888453453844 Functional Gain - DDI2 ENSG00000197312 CDS Human protein_coding chr1:15978330 chr1:15978331 nonsynonymous SNV 0.990 0 22 hm5C_associated_SNPs_124638 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:15978285-15978333
64251 chr14 103574851 103574851 1 + T G UCEC 103574849 + 103574829 103574869 41 CTTATCCGGAGCTACCCCGACATCAGGTGTGTACCCCACCT CTTATCCGGAGCTACCCCGACAGCAGGTGTGTACCCCACCT < 41bp 0.369265606771172 0.709943062899885 0.46314088 0.8040502 prediction 0.419886125799769 Functional Gain - EXOC3L4 ENSG00000205436 CDS Human protein_coding chr14:103574849 chr14:103574851 nonsynonymous SNV 0.675 2 23 hm5C_associated_SNPs_124639 0 0 2 GRWD1 POSTAR2 ENCODE chr14:103574806-103574861
64251 chr9 131843440 131843440 1 + C T SKCM 131843439 + 131843419 131843459 41 GGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCGGTGA GGACGGACAGTGCTCGCTCCCTGCTTCATGGCGGCCGGTGA < 41bp 0.572562376074103 0.782503523650416 0.16160893 0.088190675 prediction 0.419882295152625 Functional Gain - DOLPP1 ENSG00000167130 CDS Human protein_coding chr9:131843439 chr9:131843440 synonymous SNV . 0 22 hm5C_associated_SNPs_124642 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:131843433-131843471
64251 chr16 231021 231021 1 + C G rs144961211 231020 + 231000 231040 41 GTAACCCTCGCCCGGCACTACCCCGGAGACTTCAGCCCCGC GTAACCCTCGCCCGGCACTACGCCGGAGACTTCAGCCCCGC < 41bp 0.677843261044763 0.887783879950538 0.38595563 0.5894941 prediction 0.41988123781155 Functional Gain - HBQ1 ENSG00000086506 CDS Human protein_coding chr16:231020 chr16:231021 nonsynonymous SNV 0.114 3 22 hm5C_associated_SNPs_124643 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr16:230986-231041
64251 chr2 32288992 32288992 1 + C T LUSC 32288991 + 32288971 32289011 41 CTCCGCCCCCTTGCCTGGCCCCCGCCCCTCCCGCCGCCGGG CTCCGCCCCCTTGCCTGGCCCTCGCCCCTCCCGCCGCCGGG < 41bp 0.531251499702435 0.741180726440367 0.11434725 0.1726735 prediction 0.419858453475863 Functional Gain - SPAST ENSG00000021574 CDS Human protein_coding chr2:32288991 chr2:32288992 nonsynonymous SNV 0.124 2 22 hm5C_associated_SNPs_124648 0 0 5 RBM15B POSTAR2 GSE78030,GSM2064711 chr2:32288992-32288993
64251 chr19 58038908 58038908 1 + C G rs111934070 58038907 + 58038887 58038927 41 CCGGATCCCGGGCTTTACCGCCCGCCTTTCCAGGCCCCGCC CCGGATCCCGGGCTTTACCGCGCGCCTTTCCAGGCCCCGCC < 41bp 0.57932979698875 0.789254285905235 0.2513174 0.7613472 prediction 0.41984897783297 Functional Gain - ZNF549 ENSG00000121406 UTR5 Human protein_coding chr19:58038907 chr19:58038908 . . 0 22 hm5C_associated_SNPs_124650 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585671 chr19:58038890-58038925
64251 chr10 114925669 114925669 1 + C T COAD 114925668 + 114925648 114925688 41 TCGACTTCTTCCTTACATTCCCACAGCTCCCTGGCCGGGAC TCGACTTCTTCCTTACATTCCTACAGCTCCCTGGCCGGGAC < 41bp 0.573280223229677 0.783201680191211 0.16130546 0.12123451 prediction 0.419842913923068 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114925668 chr10:114925669 nonsynonymous SNV 0.957 5 22 hm5C_associated_SNPs_124652 0 0 6 CPSF4 POSTAR2 GSE37401,GSM917667 chr10:114925647-114925673
64251 chr3 41266129 41266129 1 + A G READ 41266126 + 41266106 41266146 41 ATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGG ATCCATTCTGGTGCCACTACCACGGCTCCTTCTCTGAGTGG < 41bp 0.601855899077182 0.811760733196785 0.36866766 0.8564721 prediction 0.419809668239205 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266126 chr3:41266129 synonymous SNV . 0 24 hm5C_associated_SNPs_124659 0 0 25 NCBP3 POSTAR2 GSE38201,GSM936507 chr3:41266118-41266145
64251 chr11 86749176 86749176 1 + T A UCEC 86749172 + 86749152 86749192 41 CCTGCCGGGTCTCCTTCCTGCAGATCACCGGGGGCGCCCTG CCTGCCGGGTCTCCTTCCTGCAGAACACCGGGGGCGCCCTG < 41bp 0.400941839723491 0.709903811099715 0.086408705 0.1838524 prediction 0.41980762219943 Functional Gain - TMEM135 ENSG00000166575 CDS Human protein_coding chr11:86749172 chr11:86749176 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_124660 0 0 3 DDX3X POSTAR2 ENCODE chr11:86749110-86749218
64251 chr2 65249922 65249922 1 + C A rs7850 65249918 + 65249898 65249938 41 TTTGCTGTGACTCCCAGACCCAGCCACTGTTTCTGCCACCC TTTGCTGTGACTCCCAGACCCAGCAACTGTTTCTGCCACCC < 41bp 0.337505286617438 0.709898964315553 0.069959074 0.11288032 prediction 0.419797928631106 Functional Gain - SLC1A4 ENSG00000115902 UTR3 Human protein_coding chr2:65249918 chr2:65249922 . . 0 25 hm5C_associated_SNPs_124661 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr2:65249889-65249931
64251 chr7 116409837 116409837 1 + A G OV 116409834 + 116409814 116409854 41 TGCTGAAATTGAACAGCGAGCTAAATATAGAGGTGGGATTC TGCTGAAATTGAACAGCGAGCTAGATATAGAGGTGGGATTC < 41bp 0.513936640937312 0.723821664192156 0.06563988 0.14558119 prediction 0.419770046509689 Functional Gain - MET ENSG00000105976 CDS Human protein_coding chr7:116409834 chr7:116409837 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_124665 0 0 1 PRPF8 POSTAR2 ENCODE chr7:116409827-116409885
64251 chr1 110884068 110884068 1 + C A rs137944396 110884067 + 110884047 110884087 41 AGTCCAGAATTGAGCAGTAGCCGGGATCGTTACAACAGCGA AGTCCAGAATTGAGCAGTAGCAGGGATCGTTACAACAGCGA < 41bp 0.62741948040585 0.837304304979103 0.71323323 0.8746844 prediction 0.419769649146506 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110884067 chr1:110884068 synonymous SNV . 0 22 hm5C_associated_SNPs_124666 0 0 15 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:110884063-110884091
64251 chr3 41266971 41266971 1 + C G rs3856747 41266970 + 41266950 41266990 41 TGTAGAAACAGCTCGTTGTACCGCTGGGACCTTGCATAACC TGTAGAAACAGCTCGTTGTACGGCTGGGACCTTGCATAACC < 41bp 0.392593074604576 0.709882440677431 0.025603116 0.06597012 prediction 0.419764881354862 Functional Gain - CTNNB1 ENSG00000168036 CDS Human protein_coding chr3:41266970 chr3:41266971 synonymous SNV . 0 22 hm5C_associated_SNPs_124670 1 0 23 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:41266892-41267041
64251 chr16 30016799 30016799 1 + C T rs74015003 30016798 + 30016778 30016818 41 CATGCCCACCACGGCCCCGCCCGGCGCCCTCCCCGTGCCAG CATGCCCACCACGGCCCCGCCTGGCGCCCTCCCCGTGCCAG < 41bp 0.545640879707534 0.755523063143829 0.3129525 0.05884233 prediction 0.419764366872591 Functional Gain - INO80E ENSG00000169592 UTR3 Human protein_coding chr16:30016798 chr16:30016799 . . 0 22 hm5C_associated_SNPs_124671 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30016699-30016887
64251 chr7 65225426 65225426 1 + T G rs111970336 65225423 + 65225403 65225443 41 TCCAACAGGCTGTGTGGTTCCGGTGCTGGTGCCGTGGAAGT TCCAACAGGCTGTGTGGTTCCGGGGCTGGTGCCGTGGAAGT < 41bp 0.718316167746934 0.928189121068445 0.24179152 0.8522067 prediction 0.419745906643021 Functional Gain - CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65225423 chr7:65225426 . . 0 24 hm5C_associated_SNPs_124675 0 0 8 PRPF8 POSTAR2 ENCODE chr7:65225410-65225446
64251 chr1 44364853 44364853 1 + C T LGG 44364852 + 44364832 44364872 41 CCCCTCAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAA CCCCTCAGCCTCCGCTGCCGCTGCTGCATCATCGTGGGCAA < 41bp 0.538206844682584 0.748078336037807 0.068279564 0.077764004 prediction 0.419742982710446 Functional Gain - ST3GAL3 ENSG00000126091 CDS Human protein_coding chr1:44364852 chr1:44364853 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124676 0 0 1 DDX24 POSTAR2 ENCODE chr1:44364847-44364899
64251 chr2 10263175 10263175 1 + C A STAD 10263174 + 10263154 10263194 41 GAGGAGGATCTTCCAGGAGCCCACGGAGCCGGTGAGTGGCG GAGGAGGATCTTCCAGGAGCCAACGGAGCCGGTGAGTGGCG < 41bp 0.613721668576794 0.823589241380192 0.37867793 0.78297156 prediction 0.419735145606795 Functional Gain - RRM2 ENSG00000171848 CDS Human protein_coding chr2:10263174 chr2:10263175 synonymous SNV . 0 22 hm5C_associated_SNPs_124678 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:10263147-10263181
64251 chrX 101382191 101382191 1 + C A UCEC 101382187 + 101382167 101382207 41 CAAGGGCTGCAGGAAAGCGCCCAGCTGAGGATGATATACCC CAAGGGCTGCAGGAAAGCGCCCAGATGAGGATGATATACCC < 41bp 0.294390954089293 0.709863099964629 0.48720178 0.57824147 prediction 0.419726199929257 Functional Gain - TCEAL2 ENSG00000184905 CDS Human protein_coding chrX:101382187 chrX:101382191 nonsynonymous SNV 0.996 4 25 hm5C_associated_SNPs_124681 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chrX:101382179-101382210
64251 chr1 46033677 46033677 1 + A G LIHC 46033674 + 46033654 46033694 41 GCGGGGAGACAACCCCTTCCCCAAGAATGCTGATGGGACTA GCGGGGAGACAACCCCTTCCCCAGGAATGCTGATGGGACTA < 41bp 0.462851551910204 0.709855260803451 0.048781246 0.21750978 prediction 0.419710521606902 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46033674 chr1:46033677 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_124683 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:46033661-46033693
64251 chr19 48918144 48918144 1 + C T STAD 48918143 + 48918123 48918163 41 CTCCACCGGATGCCCCCCGCCCGGAAAAGCGCTGCTGCAAG CTCCACCGGATGCCCCCCGCCTGGAAAAGCGCTGCTGCAAG < 41bp 0.613357644974821 0.823210872299356 0.83585835 0.8134383 prediction 0.419706454649071 Functional Gain - GRIN2D ENSG00000105464 CDS Human protein_coding chr19:48918143 chr19:48918144 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_124685 0 0 1 RBM15 POSTAR2 ENCODE chr19:48918113-48918218
64251 chr1 156562199 156562199 1 + C T UCEC 156562198 + 156562178 156562218 41 TCCAGGAGCCCCCCTACTGTCCTGGTCATCTGTGGCCCGGG TCCAGGAGCCCCCCTACTGTCTTGGTCATCTGTGGCCCGGG < 41bp 0.461991163994611 0.709850839392156 0.1306405 0.12991464 prediction 0.419701678784312 Functional Gain - NAXE ENSG00000163382 CDS Human protein_coding chr1:156562198 chr1:156562199 synonymous SNV . 0 22 hm5C_associated_SNPs_124687 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:156562158-156562220
64251 chr2 241534088 241534088 1 + C T rs140681762 241534087 + 241534067 241534107 41 ACGAGCTCACCGTTGGCTACCCGGTCACGGAGGCCGGCCAC ACGAGCTCACCGTTGGCTACCTGGTCACGGAGGCCGGCCAC < 41bp 0.569699035864991 0.77953978714891 0.15902707 0.0848605 prediction 0.419681502567838 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241534087 chr2:241534088 nonsynonymous SNV 0.006 3 22 hm5C_associated_SNPs_124689 0 0 3 BUD13 POSTAR2 ENCODE chr2:241534015-241534118
64251 chr1 87813586 87813586 1 + C A rs114402866 87813585 + 87813565 87813605 41 TTATTAGGAAATAGTTTAACCCGGACTGTAGTGTCTTATAA TTATTAGGAAATAGTTTAACCAGGACTGTAGTGTCTTATAA < 41bp 0.546633877204897 0.756461923875154 0.112163335 0.2808032 prediction 0.419656093340514 Functional Gain - LMO4 ENSG00000143013 UTR3 Human protein_coding chr1:87813585 chr1:87813586 . . 0 22 hm5C_associated_SNPs_124695 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:87813553-87813607
64251 chr2 97428051 97428051 1 + A G UCEC 97428048 + 97428028 97428068 41 ACCCCGATGACTGCACCCCCCTCAAGACTATCACTCGCTTC ACCCCGATGACTGCACCCCCCTCGAGACTATCACTCGCTTC < 41bp 0.580413675885641 0.790231704585658 0.09882888 0.5750343 prediction 0.419636057400033 Functional Gain - CNNM4 ENSG00000158158 CDS Human protein_coding chr2:97428048 chr2:97428051 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_124701 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:97428024-97428082
64251 chr16 74339345 74339345 1 + T A LUSC 74339341 + 74339321 74339361 41 TCAACCACCAGATCATCTACCAGCTGCAGGACGTCTTCAAC TCAACCACCAGATCATCTACCAGCAGCAGGACGTCTTCAAC < 41bp 0.690737723453929 0.900550208488647 0.22345492 0.101008445 prediction 0.419624970069435 Functional Gain - PSMD7 ENSG00000103035 CDS Human protein_coding chr16:74339341 chr16:74339345 nonsynonymous SNV 0.984 4 25 hm5C_associated_SNPs_124704 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:74339306-74339347
64251 chr19 50172192 50172192 1 + C T SKCM 50172191 + 50172171 50172211 41 AGCTGAAATCTCCGCCCAGCCCAGGTGAGGCACAGAGGAGC AGCTGAAATCTCCGCCCAGCCTAGGTGAGGCACAGAGGAGC < 41bp 0.580817445853915 0.79062628181156 0.8292006 0.24651456 prediction 0.419617671915291 Functional Gain - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50172191 chr19:50172192 nonsynonymous SNV 0.879 2 22 hm5C_associated_SNPs_124706 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50172170-50172194
64251 chr19 50285952 50285952 1 + C T PRAD 50285951 + 50285931 50285971 41 GGAGATGGGCGAGGCCTTTGCCGCTGACATCCCCCGCATCC GGAGATGGGCGAGGCCTTTGCTGCTGACATCCCCCGCATCC < 41bp 0.591526008482351 0.801333048522548 0.8871752 0.7483263 prediction 0.419614080080393 Functional Gain - AP2A1 ENSG00000196961 CDS Human protein_coding chr19:50285951 chr19:50285952 synonymous SNV . 0 22 hm5C_associated_SNPs_124708 0 0 7 DDX24 POSTAR2 ENCODE chr19:50285859-50285968
64251 chr8 22273287 22273287 1 + T C LIHC 22273285 + 22273265 22273305 41 CCCTGTCACCCTTCCAGCATCATCATGGACACAGCCATTAT CCCTGTCACCCTTCCAGCATCACCATGGACACAGCCATTAT < 41bp 0.411449577196376 0.709804019981419 0.029606253 0.08316606 prediction 0.419608039962839 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22273285 chr8:22273287 synonymous SNV . 0 23 hm5C_associated_SNPs_124710 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr8:22273281-22273315
64251 chr19 8550971 8550971 1 + C T rs2230646 8550970 + 8550950 8550990 41 CGTGATGGATCGCATGGCCACCGGCCTGGAGCGCATGGGCG CGTGATGGATCGCATGGCCACTGGCCTGGAGCGCATGGGCG < 41bp 0.575023737584976 0.784824055466464 0.23573297 0.22871709 prediction 0.419600635762975 Functional Gain - HNRNPM ENSG00000099783 CDS Human protein_coding chr19:8550970 chr19:8550971 synonymous SNV . 0 22 hm5C_associated_SNPs_124712 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:8550953-8550977
64251 chr3 122419983 122419983 1 + C A LGG 122419982 + 122419962 122420002 41 AGAGAGAGGGCAGACTCCTACCGGGCAATGCCACCATCTCC AGAGAGAGGGCAGACTCCTACAGGGCAATGCCACCATCTCC < 41bp 0.618608687453404 0.828396278820645 0.83860695 0.9065205 prediction 0.419575182734482 Functional Gain - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122419982 chr3:122419983 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_124717 0 0 1 FXR2 POSTAR2 ENCODE chr3:122419941-122419990
64251 chr19 50386921 50386921 1 + C T COAD 50386920 + 50386900 50386940 41 TCACTCAGGGATGAGTATTTCCGCATGAAGCTGCAGTGGAA TCACTCAGGGATGAGTATTTCTGCATGAAGCTGCAGTGGAA < 41bp 0.631177619223528 0.84096182235099 0.7605273 0.835562 prediction 0.419568406254925 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50386920 chr19:50386921 nonsynonymous SNV 0.983 1 22 hm5C_associated_SNPs_124720 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr19:50386914-50386949
64251 chr5 10256111 10256111 1 + C T UCEC 10256110 + 10256090 10256130 41 GAAGCGGAGCAATTGCTAGACCGAGGCATTCACCCAATCAG GAAGCGGAGCAATTGCTAGACTGAGGCATTCACCCAATCAG < 41bp 0.466354452797686 0.709777960316608 0.8423778 0.7240473 prediction 0.419555920633216 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10256110 chr5:10256111 stopgain 1.000 1 22 hm5C_associated_SNPs_124727 0 0 29 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:10256060-10256117
64251 chr7 150771283 150771283 1 + C A LUAD 150771282 + 150771262 150771302 41 AGGGGAAGCCCCGGGGCCAGCCCAACACGGCCCTGCTGTCG AGGGGAAGCCCCGGGGCCAGCACAACACGGCCCTGCTGTCG < 41bp 0.442674574707535 0.709777147419183 0.26061946 0.21951085 prediction 0.419554294838365 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150771282 chr7:150771283 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_124728 0 0 2 GRSF1 POSTAR2 ENCODE chr7:150771208-150771317
64251 chr8 11162451 11162451 1 + T G SKCM 11162449 + 11162429 11162469 41 AATCCATCGATGATGAAGCTCTTCGGAAGGTAGCTACATTT AATCCATCGATGATGAAGCTCTGCGGAAGGTAGCTACATTT < 41bp 0.35796777140615 0.709773899954978 0.13075435 0.27790263 prediction 0.419547799909955 Functional Gain - MTMR9 ENSG00000104643 CDS Human protein_coding chr8:11162449 chr8:11162451 synonymous SNV . 0 23 hm5C_associated_SNPs_124730 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917669 chr8:11162440-11162471
64251 chr19 6750016 6750016 1 + C T SKCM 6750015 + 6749995 6750035 41 GGGACCCCGCCAGCTTGGAGCCCCAGATCGCTGAAACCCTG GGGACCCCGCCAGCTTGGAGCTCCAGATCGCTGAAACCCTG < 41bp 0.423216467940635 0.709773733243051 0.11390123 0.14562795 prediction 0.419547466486102 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6750015 chr19:6750016 nonsynonymous SNV 0.982 3 22 hm5C_associated_SNPs_124731 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:6750007-6750045
64251 chr12 104720157 104720157 1 + A G rs34368560 104720154 + 104720134 104720174 41 GCAATAGGAAGAGATGCTTGCACAAGAAAAATTGGCTTAGA GCAATAGGAAGAGATGCTTGCACGAGAAAAATTGGCTTAGA < 41bp 0.514902662846184 0.724662290193723 0.29926366 0.4875422 prediction 0.419519254695079 Functional Gain - TXNRD1 ENSG00000198431 CDS Human protein_coding chr12:104720154 chr12:104720157 synonymous SNV . 0 24 hm5C_associated_SNPs_124742 0 0 6 HNRNPU POSTAR2 GSE34491,GSM850170 chr12:104720140-104720160
64251 chr3 51423764 51423764 1 + T C UCEC 51423761 + 51423741 51423781 41 AAGCAAGAGGCAAAGAGAATCGGTTGGTAAGTAGCTGGTGA AAGCAAGAGGCAAAGAGAATCGGCTGGTAAGTAGCTGGTGA < 41bp 0.507560786929975 0.717311650892919 0.40856838 0.7683356 prediction 0.419501727925887 Functional Gain - MANF ENSG00000145050 CDS Human protein_coding chr3:51423761 chr3:51423764 synonymous SNV . 0 24 hm5C_associated_SNPs_124750 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr3:51423763-51423787
64251 chr22 35808531 35808531 1 + C T SKCM 35808530 + 35808510 35808550 41 CTTTGCTGGGGCCGTGAGCCCCCAGGAGGAGGAGGAGTTCC CTTTGCTGGGGCCGTGAGCCCTCAGGAGGAGGAGGAGTTCC < 41bp 0.617455251954306 0.827195204844183 0.26362145 0.20355874 prediction 0.419479905779753 Functional Gain - MCM5 ENSG00000100297 CDS Human protein_coding chr22:35808530 chr22:35808531 synonymous SNV . 0 22 hm5C_associated_SNPs_124754 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:35808527-35808554
64251 chr17 19459147 19459147 1 + C A READ 19459143 + 19459123 19459163 41 TGCCTGCAGGACTGGGCCTCCTTCCTCCGCCTGGCCATCCC TGCCTGCAGGACTGGGCCTCCTTCATCCGCCTGGCCATCCC < 41bp 0.281097719990668 0.709737946596777 0.06703928 0.28292263 prediction 0.419475893193555 Functional Gain - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19459143 chr17:19459147 nonsynonymous SNV 0.660 0 25 hm5C_associated_SNPs_124757 0 0 5 EFTUD2 POSTAR2 ENCODE chr17:19459021-19459156
64251 chr1 114448312 114448312 1 + A G LAML 114448309 + 114448289 114448329 41 CTTCTTGTCTCACATGCACTCGGACCACACCGTGGGCCTGT CTTCTTGTCTCACATGCACTCGGGCCACACCGTGGGCCTGT < 41bp 0.596896457363887 0.806633549512224 0.90347743 0.9298498 prediction 0.419474184296675 Functional Gain - DCLRE1B ENSG00000118655 CDS Human protein_coding chr1:114448309 chr1:114448312 nonsynonymous SNV 0.984 5 24 hm5C_associated_SNPs_124759 0 0 2 IGF2BP2 POSTAR2 ENCODE chr1:114448197-114448388
64251 chr1 1551930 1551930 1 + C T rs576281318 1551929 + 1551909 1551949 41 AGAGGCCAGTCCCAAAGTTTCCAGGCATCAGGGCTGCAGCC AGAGGCCAGTCCCAAAGTTTCTAGGCATCAGGGCTGCAGCC < 41bp 0.539744932898647 0.749477412526445 0.9102154 0.89126074 prediction 0.419464959255596 Functional Gain - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1551929 chr1:1551930 stopgain 0.017 0 22 hm5C_associated_SNPs_124762 0 0 2 DDX3X POSTAR2 ENCODE chr1:1551889-1551935
64251 chr15 42137203 42137203 1 + T C ESCA 42137200 + 42137180 42137220 41 AGGAGCTGGCCGAGCGTGCCCGCTTGGGCTACCCAAGCTGC AGGAGCTGGCCGAGCGTGCCCGCCTGGGCTACCCAAGCTGC < 41bp 0.5059216871793 0.715653317377595 0.054453045 0.0702948 prediction 0.41946326039659 Functional Gain - JMJD7-PLA2G4B;PLA2G4B ENSG00000168970;ENSG00000243708 CDS Human other chr15:42137200 chr15:42137203 synonymous SNV . 0 24 hm5C_associated_SNPs_124763 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr15:42137191-42137213
64251 chr2 32422850 32422850 1 + C A UCEC 32422846 + 32422826 32422866 41 ATCCATTTGTTTTGATTGATCTTGCTGGAGCATTTGCTCTT ATCCATTTGTTTTGATTGATCTTGATGGAGCATTTGCTCTT < 41bp 0.306571402985239 0.709714428925819 0.04744056 0.04267153 prediction 0.419428857851639 Functional Gain - SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32422846 chr2:32422850 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_124766 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr2:32422800-32422868
64251 chr11 608247 608247 1 + C T UCEC 608246 + 608226 608266 41 GAGAGCCAGGGCCTGGCTGCCCGGCTGCGGAGGCCATCCCC GAGAGCCAGGGCCTGGCTGCCTGGCTGCGGAGGCCATCCCC < 41bp 0.559878234747116 0.769591934147069 0.18958169 0.05008456 prediction 0.419427398799906 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:608246 chr11:608247 nonsynonymous SNV 0.005 1 22 hm5C_associated_SNPs_124767 0 0 2 EIF3H POSTAR2 ENCODE chr11:608246-608273
64251 chr11 64807221 64807221 1 + C A COAD 64807217 + 64807197 64807237 41 AGGCAGCTGAGTACCTGAAGCGGGCAGAGGAGATCCTGCGC AGGCAGCTGAGTACCTGAAGCGGGAAGAGGAGATCCTGCGC < 41bp 0.724762272946399 0.934472892861375 0.7705612 0.8540572 prediction 0.419421239829952 Functional Gain - SNX15 ENSG00000110025 CDS Human protein_coding chr11:64807217 chr11:64807221 nonsynonymous SNV 0.977 3 25 hm5C_associated_SNPs_124768 0 0 1 PPIG POSTAR2 ENCODE chr11:64807176-64807249
64251 chr2 143642982 143642982 1 + A G COAD 143642979 + 143642959 143642999 41 TGCCGGCTGACACAGTGCAGCGCATTGCGGCTGAACTCAAA TGCCGGCTGACACAGTGCAGCGCGTTGCGGCTGAACTCAAA < 41bp 0.589049832790514 0.798753286580093 0.35609496 0.14481294 prediction 0.419406907579159 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143642979 chr2:143642982 nonsynonymous SNV 0.123 0 24 hm5C_associated_SNPs_124772 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr2:143642960-143643040
64251 chrX 155239605 155239605 1 + C A SARC 155239601 + 155239581 155239621 41 TGCTCACTTGTGGCCCAGCGCGTCCTTGGAAATCTGTGGCC TGCTCACTTGTGGCCCAGCGCGTCATTGGAAATCTGTGGCC < 41bp 0.306292318907645 0.709696472695556 0.09466639 0.17860186 prediction 0.419392945391111 Functional Gain - IL9R ENSG00000124334 CDS Human protein_coding chrX:155239601 chrX:155239605 nonsynonymous SNV 0.011 3 25 hm5C_associated_SNPs_124774 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:155239575-155239613
64251 chr17 42827271 42827271 1 + C T rs184344009 42827270 + 42827250 42827290 41 TCCCCCAGCCCCCCACGCTCCCGCACACAGATCCTCAGGAA TCCCCCAGCCCCCCACGCTCCTGCACACAGATCCTCAGGAA < 41bp 0.581178549042699 0.790862333150292 0.15085796 0.17939869 prediction 0.419367568215185 Functional Gain - DBF4B ENSG00000161692 UTR3 Human protein_coding chr17:42827270 chr17:42827271 . . 0 22 hm5C_associated_SNPs_124779 0 0 2 UPF1 POSTAR2 ENCODE chr17:42827258-42827333
64251 chr5 134007542 134007542 1 + T C GBM 134007539 + 134007519 134007559 41 AACGGATCTATGGTGGTCCACAGTAGTTACGACGAGATTGA AACGGATCTATGGTGGTCCACAGCAGTTACGACGAGATTGA < 41bp 0.531138395690507 0.740822158828142 0.14823037 0.3736066 prediction 0.419367526275269 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134007539 chr5:134007542 synonymous SNV . 0 24 hm5C_associated_SNPs_124780 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr5:134007539-134007551
64251 chr8 87424099 87424099 1 + T G STAD 87424097 + 87424077 87424117 41 TGCCAACACAGAAACCTTGCCATCAGGGTATGTTAAGCTTT TGCCAACACAGAAACCTTGCCAGCAGGGTATGTTAAGCTTT < 41bp 0.368779037562336 0.709683655289559 0.12030524 0.25178146 prediction 0.419367310579118 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87424097 chr8:87424099 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_124782 0 0 2 PRPF8 POSTAR2 ENCODE chr8:87424048-87424108
64251 chr5 134210146 134210146 1 + C T LGG 134210145 + 134210125 134210165 41 CGGCTGCCGGTCGACGACCGCCCCGCGTCATGCGGCTCCTC CGGCTGCCGGTCGACGACCGCTCCGCGTCATGCGGCTCCTC < 41bp 0.563714897345433 0.773394605128464 0.2036185 0.12722242 prediction 0.419359415566062 Functional Gain - TXNDC15 ENSG00000113621 CDS Human protein_coding chr5:134210145 chr5:134210146 nonsynonymous SNV 0.062 0 22 hm5C_associated_SNPs_124784 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:134210120-134210160
64251 chr22 32352631 32352631 1 + A G GBM 32352628 + 32352608 32352648 41 TGAGCAAGCCTGCCTCTTAGCCAAACAAGCCTTCGATGATG TGAGCAAGCCTGCCTCTTAGCCAGACAAGCCTTCGATGATG < 41bp 0.460264118495871 0.70967934250179 0.35074204 0.5305172 prediction 0.41935868500358 Functional Gain - YWHAH ENSG00000128245 CDS Human protein_coding chr22:32352628 chr22:32352631 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_124785 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:32352460-32352640
64251 chr8 145535748 145535748 1 + C T SKCM 145535747 + 145535727 145535767 41 GAGTCCCGGGCGCCCATCTTCCGTGGACACCCTCTTGTCCC GAGTCCCGGGCGCCCATCTTCTGTGGACACCCTCTTGTCCC < 41bp 0.571973153336812 0.781652374132267 0.5744095 0.2532284 prediction 0.41935844159091 Functional Gain - HSF1 ENSG00000185122 CDS Human protein_coding chr8:145535747 chr8:145535748 synonymous SNV . 0 22 hm5C_associated_SNPs_124786 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:145535719-145535751
64251 chr20 55209271 55209271 1 + C T READ 55209270 + 55209250 55209290 41 ACAAGATTGGGTTGAATCTTCCGGCCGGGAGGCGGAAAGCC ACAAGATTGGGTTGAATCTTCTGGCCGGGAGGCGGAAAGCC < 41bp 0.452054746233126 0.709646991645791 0.6642883 0.495515 prediction 0.419293983291582 Functional Gain - TFAP2C ENSG00000087510 CDS Human protein_coding chr20:55209270 chr20:55209271 nonsynonymous SNV 0.160 5 22 hm5C_associated_SNPs_124801 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr20:55209264-55209299
64251 chr20 44639177 44639177 1 + C A SARC 44639176 + 44639156 44639196 41 GTGATTGACGACGCCTTTGCCCGCGCCTTCGCACTGTGGAG GTGATTGACGACGCCTTTGCCAGCGCCTTCGCACTGTGGAG < 41bp 0.444595932627585 0.709621805814287 0.27773684 0.8896757 prediction 0.419243611628574 Functional Gain - MMP9 ENSG00000100985 CDS Human protein_coding chr20:44639176 chr20:44639177 nonsynonymous SNV 0.983 2 22 hm5C_associated_SNPs_124810 0 0 1 DICER1 POSTAR2 GSE55333,GSM1334288 chr20:44639164-44639182
64251 chr17 37872089 37872089 1 + T G BRCA 37872086 + 37872066 37872106 41 AGTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTT AGTGGACTGGCCCTCATCCACCAGAACACCCACCTCTGCTT < 41bp 0.306619571656364 0.709619592799998 0.043883324 0.07780686 prediction 0.419239185599995 Functional Gain - ERBB2 ENSG00000141736 CDS Human protein_coding chr17:37872086 chr17:37872089 nonsynonymous SNV 0.549 0 24 hm5C_associated_SNPs_124813 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:37872088-37872108
64251 chr6 64422167 64422167 1 + A G GBM 64422164 + 64422144 64422184 41 TCTTTGACGAGTCTTAGTCTCAGAGGTAAGCCACCAGATGT TCTTTGACGAGTCTTAGTCTCAGGGGTAAGCCACCAGATGT < 41bp 0.565309257040166 0.774927192755274 0.9409131 0.95166314 prediction 0.419235871430218 Functional Gain - PHF3 ENSG00000118482 CDS Human protein_coding chr6:64422164 chr6:64422167 synonymous SNV . 0 24 hm5C_associated_SNPs_124815 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:64422150-64422168
64251 chr21 47410914 47410914 1 + C G LUSC 47410913 + 47410893 47410933 41 GGCATTCAAGGACCCCCTGGCCCCAAGGGAGACCCCGGTGC GGCATTCAAGGACCCCCTGGCGCCAAGGGAGACCCCGGTGC < 41bp 0.375885085362048 0.709613854713981 0.19210386 0.41798693 prediction 0.419227709427962 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47410913 chr21:47410914 nonsynonymous SNV 0.568 2 22 hm5C_associated_SNPs_124818 0 0 1 PPIG POSTAR2 ENCODE chr21:47410898-47410928
64251 chr19 48967469 48967469 1 + C T UCEC 48967468 + 48967448 48967488 41 CCCCAGAGGGTGAGTACATCCCGCTGGACCACCAGGATGTG CCCCAGAGGGTGAGTACATCCTGCTGGACCACCAGGATGTG < 41bp 0.459972413376763 0.709607946192108 0.33597803 0.1637043 prediction 0.419215892384216 Functional Gain - KCNJ14 ENSG00000182324 CDS Human protein_coding chr19:48967468 chr19:48967469 nonsynonymous SNV 0.896 4 22 hm5C_associated_SNPs_124822 0 0 5 CPSF1 POSTAR2 GSE37401,GSM917672 chr19:48967451-48967486
64251 chr19 44514613 44514613 1 + A G LUSC 44514610 + 44514590 44514630 41 TCATACAGGACAGAAACCTTCACAGAATGGGAAGTGTAAAC TCATACAGGACAGAAACCTTCACGGAATGGGAAGTGTAAAC < 41bp 0.543098277719552 0.752705292018727 0.058030874 0.15460798 prediction 0.419214028598349 Functional Gain - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514610 chr19:44514613 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_124823 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44514581-44514615
64251 chr1 26604391 26604391 1 + C A rs115584907 26604390 + 26604370 26604410 41 TGGGGCCCTAGGGATTATAGCCAGGACTCTAATCTGCCTAC TGGGGCCCTAGGGATTATAGCAAGGACTCTAATCTGCCTAC < 41bp 0.6389974026103 0.848596162434217 0.8621288 0.8987555 prediction 0.419197519647833 Functional Gain - CEP85 ENSG00000130695 UTR3 Human protein_coding chr1:26604390 chr1:26604391 . . 0 22 hm5C_associated_SNPs_124826 0 0 15 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:26604344-26604423
64251 chr17 59482792 59482792 1 + C T COAD 59482791 + 59482771 59482811 41 GAGCCTGGAGAAGGAGCGCGCCGAAGCTCGGAGGAAGGACG GAGCCTGGAGAAGGAGCGCGCTGAAGCTCGGAGGAAGGACG < 41bp 0.552423647715488 0.762020669366436 0.46796232 0.42199543 prediction 0.419194043301895 Functional Gain - TBX2 ENSG00000121068 CDS Human protein_coding chr17:59482791 chr17:59482792 synonymous SNV . 0 22 hm5C_associated_SNPs_124827 0 0 2 PPIG POSTAR2 ENCODE chr17:59482753-59482862
64251 chr19 1250023 1250023 1 + C G rs564975187 1250022 + 1250002 1250042 41 ACCCTTAACCGCGCCGCGTCCCGGTCGCGCCCGCCGCCCTT ACCCTTAACCGCGCCGCGTCCGGGTCGCGCCCGCCGCCCTT < 41bp 0.65999677541925 0.869592336748965 0.31650203 0.9086265 prediction 0.41919112265943 Functional Gain - MIDN ENSG00000167470 UTR5 Human protein_coding chr19:1250022 chr19:1250023 . . 0 22 hm5C_associated_SNPs_124828 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr19:1250001-1250028
64251 chr1 151237981 151237981 1 + A G UCEC 151237978 + 151237958 151237998 41 GGCCCAGTTTGGCTGATGCTCTCATCAGTTCTCCGATTTTG GGCCCAGTTTGGCTGATGCTCTCGTCAGTTCTCCGATTTTG < 41bp 0.598514439046283 0.808104747257289 0.12646648 0.2558704 prediction 0.419180616422012 Functional Gain - PSMD4 ENSG00000159352 CDS Human protein_coding chr1:151237978 chr1:151237981 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_124830 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:151237946-151237992
64251 chr15 85189464 85189464 1 + T G rs2271431 85189462 + 85189442 85189482 41 CCAGATCAACGACCTGCAGACTTCGGAGCCTCGCCCCATGG CCAGATCAACGACCTGCAGACTGCGGAGCCTCGCCCCATGG < 41bp 0.367899293337104 0.709587578632147 0.14129442 0.19024369 prediction 0.419175157264295 Functional Gain - WDR73 ENSG00000177082 CDS Human protein_coding chr15:85189462 chr15:85189464 synonymous SNV . 0 23 hm5C_associated_SNPs_124832 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:85189447-85189478
64251 chr2 113943326 113943326 1 + C G rs188416937 113943325 + 113943305 113943345 41 CAAGTGGGAGAGGTCACTGCCCGAGGGAGGACAGGGCATGC CAAGTGGGAGAGGTCACTGCCGGAGGGAGGACAGGGCATGC < 41bp 0.524918078744165 0.734503946917444 0.66769654 0.9125879 prediction 0.419171736346558 Functional Gain - PSD4 ENSG00000125637 UTR3 Human protein_coding chr2:113943325 chr2:113943326 . . 0 22 hm5C_associated_SNPs_124836 0 0 1 U2AF1 POSTAR2 ENCODE chr2:113943257-113943376
64251 chr1 40535443 40535443 1 + C T UCEC 40535442 + 40535422 40535462 41 GTGGTCCAGTACGCAGTGGCCCCAAACCATTCTCTGCACCT GTGGTCCAGTACGCAGTGGCCTCAAACCATTCTCTGCACCT < 41bp 0.441920949057925 0.709584298969804 0.32164806 0.27528906 prediction 0.419168597939607 Functional Gain - CAP1 ENSG00000131236 CDS Human protein_coding chr1:40535442 chr1:40535443 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_124838 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:40535434-40535462
64251 chr1 32653693 32653693 1 + C A SKCM 32653692 + 32653672 32653712 41 AGCAAGCTTGAGAGCCTATGCCGTGAGCTGCAGCGGCACAA AGCAAGCTTGAGAGCCTATGCAGTGAGCTGCAGCGGCACAA < 41bp 0.446968149269753 0.709577875764748 0.50857353 0.521363 prediction 0.419155751529497 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32653692 chr1:32653693 nonsynonymous SNV 0.987 4 22 hm5C_associated_SNPs_124842 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:32653660-32653707
64251 chr11 63993819 63993819 1 + C G rs112856902 63993818 + 63993798 63993838 41 CGGGCCCTGGAAAGGGGTCCCCGCGCGCCCCGGGTCGGAGG CGGGCCCTGGAAAGGGGTCCCGGCGCGCCCCGGGTCGGAGG < 41bp 0.651104724138982 0.860652449842942 0.14792585 0.31975394 prediction 0.419095451407921 Functional Gain - NUDT22 ENSG00000149761 UTR5 Human protein_coding chr11:63993818 chr11:63993819 . . 0 22 hm5C_associated_SNPs_124852 0 0 4 DDX3X POSTAR2 ENCODE chr11:63993798-63993867
64251 chr1 22816644 22816644 1 + C T UCEC 22816643 + 22816623 22816663 41 TCGATGCATCTGTGGTGAGCCCCGAGGAGTTTGCGCTCTTG TCGATGCATCTGTGGTGAGCCTCGAGGAGTTTGCGCTCTTG < 41bp 0.444805711375686 0.709543480563627 0.10232243 0.28896135 prediction 0.419086961127255 Functional Gain - ZBTB40 ENSG00000184677 CDS Human protein_coding chr1:22816643 chr1:22816644 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_124855 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:22816622-22816660
64251 chr2 239229372 239229372 1 + C A rs13398676 239229371 + 239229351 239229391 41 GATTCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGC GATTCGGAGGCCGCCGCTGACAGAGAAGCTGCTGAGCAAGC < 41bp 0.616313089513859 0.825853662001141 0.67434293 0.90118957 prediction 0.419081144974564 Functional Gain - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239229371 chr2:239229372 synonymous SNV . 0 22 hm5C_associated_SNPs_124858 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:239229371-239229372
64251 chr19 1037793 1037793 1 + C T LUAD 1037792 + 1037772 1037812 41 TATATGACCCCAAGTACTGCCCGCAAGGCACAGTGGCCGAT TATATGACCCCAAGTACTGCCTGCAAGGCACAGTGGCCGAT < 41bp 0.620444434299016 0.829977597324483 0.07752478 0.27821848 prediction 0.419066326050934 Functional Gain - CNN2 ENSG00000064666 CDS Human protein_coding chr19:1037792 chr19:1037793 nonsynonymous SNV 0.557 3 22 hm5C_associated_SNPs_124863 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:1037792-1037793
64251 chr7 73868241 73868241 1 + T G rs181306727 73868237 + 73868217 73868257 41 CCCCGCGCTCCCGCTCTCCGCTCCTCTCCCCGCGCCGCCCC CCCCGCGCTCCCGCTCTCCGCTCCGCTCCCCGCGCCGCCCC < 41bp 0.544255263942179 0.753786276761595 0.17623752 0.2465553 prediction 0.419062025638832 Functional Gain - GTF2IRD1 ENSG00000006704 UTR5 Human protein_coding chr7:73868237 chr7:73868241 . . 0 25 hm5C_associated_SNPs_124867 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr7:73868209-73868249
64251 chr1 6681949 6681949 1 + C G rs577761468 6681945 + 6681925 6681965 41 GGAGGTGGACTGGACACCCACGTGCAGCGGGTTTGGCTCAT GGAGGTGGACTGGACACCCACGTGGAGCGGGTTTGGCTCAT < 41bp 0.403584941965142 0.709524164359466 0.20930877 0.40671885 prediction 0.419048328718933 Functional Gain - PHF13 ENSG00000116273 UTR3 Human protein_coding chr1:6681945 chr1:6681949 . . 0 25 hm5C_associated_SNPs_124870 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:6681946-6681963
64251 chr9 75777732 75777732 1 + A G HNSC 75777729 + 75777709 75777749 41 GATCTGGCCAAAGACATAACCTCAGACACATCTGGAGATTT GATCTGGCCAAAGACATAACCTCGGACACATCTGGAGATTT < 41bp 0.479819774238797 0.709523245214131 0.22098479 0.35559696 prediction 0.419046490428262 Functional Gain - ANXA1 ENSG00000135046 CDS Human protein_coding chr9:75777729 chr9:75777732 synonymous SNV . 0 24 hm5C_associated_SNPs_124872 0 0 2 GPKOW POSTAR2 ENCODE chr9:75777651-75777745
64251 chr2 27278039 27278039 1 + C T UCEC 27278038 + 27278018 27278058 41 ATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCG ATCCTCCGACCTGATGATCCCTGGGCCCAAACCCTCCGTCG < 41bp 0.578594535712678 0.78811667067497 0.9230517 0.8154327 prediction 0.419044269924584 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27278038 chr2:27278039 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_124873 1 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:27278029-27278057
64251 chr22 41913629 41913629 1 + C G BLCA 41913628 + 41913608 41913648 41 AAGTACCTGAGCAAGACCGGCCGGGAAGGTGAGCTGGCAGG AAGTACCTGAGCAAGACCGGCGGGGAAGGTGAGCTGGCAGG < 41bp 0.382284035083345 0.709518908808516 0.6333877 0.9098917 prediction 0.419037817617032 Functional Gain - ACO2 ENSG00000100412 CDS Human protein_coding chr22:41913628 chr22:41913629 nonsynonymous SNV 0.821 4 22 hm5C_associated_SNPs_124874 0 0 2 PRPF8 POSTAR2 ENCODE chr22:41913628-41913707
64251 chr17 45009562 45009562 1 + T C UCEC 45009559 + 45009539 45009579 41 CTTCTGTCTCGAACCTTCACCACTAACGTAAGCCAGGCCCG CTTCTGTCTCGAACCTTCACCACCAACGTAAGCCAGGCCCG < 41bp 0.566799610002522 0.776317473203964 0.3679713 0.354075 prediction 0.419035726402883 Functional Gain - GOSR2 ENSG00000108433;ENSG00000262633 CDS Human other chr17:45009559 chr17:45009562 synonymous SNV . 0 24 hm5C_associated_SNPs_124875 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:45009536-45009562
64251 chr2 8822266 8822266 1 + C G rs56393729 8822262 + 8822242 8822282 41 CTGAGCTTCAGGGCAGCCAGCTCCCTCCCGGTCTCGCCTTC CTGAGCTTCAGGGCAGCCAGCTCCGTCCCGGTCTCGCCTTC < 41bp 0.560997297007845 0.770498433992943 0.3322185 0.6007493 prediction 0.419002273970195 Functional Gain - ID2 ENSG00000115738 UTR5 Human protein_coding chr2:8822262 chr2:8822266 . . 0 25 hm5C_associated_SNPs_124884 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819212 chr2:8822220-8822280
64251 chr12 2921981 2921981 1 + T G STAD 2921978 + 2921958 2921998 41 CGCTGGAGTTCAGCGGGAGCCTCTTCCCGCACGCAATCTGC CGCTGGAGTTCAGCGGGAGCCTCGTCCCGCACGCAATCTGC < 41bp 0.325804882436182 0.709499405757998 0.2856704 0.43568268 prediction 0.418998811515996 Functional Gain - ITFG2 ENSG00000111203 CDS Human protein_coding chr12:2921978 chr12:2921981 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_124886 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:2921968-2921988
64251 chr17 48557348 48557348 1 + T C rs2290861 48557346 + 48557326 48557366 41 GCAGCCCACCTGCCTGCAGACTTGGAAGTCACATTGGAGGC GCAGCCCACCTGCCTGCAGACTCGGAAGTCACATTGGAGGC < 41bp 0.6513856159831 0.860884357978047 0.061791033 0.08954796 prediction 0.418997483989895 Functional Gain - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557346 chr17:48557348 nonsynonymous SNV 0.983 0 23 hm5C_associated_SNPs_124888 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48557329-48557353
64251 chr19 50156698 50156698 1 + C T UCEC 50156697 + 50156677 50156717 41 GCCACTGAGGAGGCTGGGGTCCGAGGTGGGGCGGAGGAGGA GCCACTGAGGAGGCTGGGGTCTGAGGTGGGGCGGAGGAGGA < 41bp 0.576664347032438 0.786158290852802 0.8937845 0.87801087 prediction 0.418987887640729 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50156697 chr19:50156698 stopgain 0.997 0 22 hm5C_associated_SNPs_124889 0 0 6 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr19:50156680-50156700
64251 chr18 21646038 21646038 1 + A G rs151171824 21646035 + 21646015 21646055 41 GCATGTGATGACTTAAAAACCACAGAAAAACTGTGTGAAAG GCATGTGATGACTTAAAAACCACGGAAAAACTGTGTGAAAG < 41bp 0.485669703278438 0.709490279250685 0.5538091 0.52448004 prediction 0.418980558501371 Functional Gain - TTC39C ENSG00000168234 CDS Human protein_coding chr18:21646035 chr18:21646038 synonymous SNV . 0 24 hm5C_associated_SNPs_124890 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr18:21646020-21646060
64251 chr15 57565459 57565459 1 + A G COAD 57565456 + 57565436 57565476 41 CTTAGTCTAGAACAGCAAGTCAGAGGTAAGTAGGTTCAGCC CTTAGTCTAGAACAGCAAGTCAGGGGTAAGTAGGTTCAGCC < 41bp 0.513904811336783 0.723394699734776 0.8184246 0.90756 prediction 0.418979776795984 Functional Gain - TCF12 ENSG00000140262 CDS Human protein_coding chr15:57565456 chr15:57565459 synonymous SNV . 0 24 hm5C_associated_SNPs_124891 0 0 4 GRWD1 POSTAR2 ENCODE chr15:57565399-57565467
64251 chr1 207307914 207307914 1 + C T LGG 207307913 + 207307893 207307933 41 AAGGAGATGGCACGTGGAGTCCCCGAACACCATCATGTGGA AAGGAGATGGCACGTGGAGTCTCCGAACACCATCATGTGGA < 41bp 0.460885152371433 0.709488546446733 0.13925493 0.38467956 prediction 0.418977092893467 Functional Gain - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207307913 chr1:207307914 nonsynonymous SNV 0.018 4 22 hm5C_associated_SNPs_124892 0 0 2 SND1 POSTAR2 ENCODE chr1:207307896-207307930
64251 chr4 160275017 160275017 1 + C T LUAD 160275016 + 160274996 160275036 41 CCGAGCAAGCTGGGCGTCTTCCACAGGTTACTGGGGAGAAG CCGAGCAAGCTGGGCGTCTTCTACAGGTTACTGGGGAGAAG < 41bp 0.6361267036297 0.845608529765346 0.30311435 0.47146454 prediction 0.418963652271291 Functional Gain - RAPGEF2 ENSG00000109756 CDS Human protein_coding chr4:160275016 chr4:160275017 synonymous SNV . 0 22 hm5C_associated_SNPs_124895 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:160275004-160275033
64251 chr9 114409459 114409459 1 + T C COAD 114409456 + 114409436 114409476 41 AGTACTACAGCCATTACTACCACTACTATAGCAGGCGCTTG AGTACTACAGCCATTACTACCACCACTATAGCAGGCGCTTG < 41bp 0.536491895027117 0.745955802349356 0.13220456 0.092968285 prediction 0.418927814644477 Functional Gain - DNAJC25 ENSG00000059769 CDS Human protein_coding chr9:114409456 chr9:114409459 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_124898 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:114409445-114409466
64251 chr1 222817755 222817755 1 + A G rs147973663 222817752 + 222817732 222817772 41 CCTTTCCGGAGGAGGAAGCTCTGAAAAACAGGGGGCCCAGT CCTTTCCGGAGGAGGAAGCTCTGGAAAACAGGGGGCCCAGT < 41bp 0.541223988958285 0.750677598942765 0.29320106 0.7765653 prediction 0.418907219968959 Functional Gain - MIA3 ENSG00000154305 UTR5 Human protein_coding chr1:222817752 chr1:222817755 . . 0 24 hm5C_associated_SNPs_124902 0 0 1 DDX3X POSTAR2 ENCODE chr1:222817730-222817787
64251 chr3 101576293 101576293 1 + T C UCEC 101576290 + 101576270 101576310 41 GCATTTGGTTCCCGATGGCCCTGTGGGAGAACAGGTGAGAG GCATTTGGTTCCCGATGGCCCTGCGGGAGAACAGGTGAGAG < 41bp 0.480127786292769 0.709447424472886 0.19615474 0.38182205 prediction 0.418894848945772 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101576290 chr3:101576293 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_124903 0 0 3 BUD13 POSTAR2 ENCODE chr3:101576287-101576324
64251 chr16 29675785 29675785 1 + C T COAD 29675784 + 29675764 29675804 41 AACGCAAGCACTGTGCCCTTCCGGAACCCAGATGAGAACTC AACGCAAGCACTGTGCCCTTCTGGAACCCAGATGAGAACTC < 41bp 0.601587510008011 0.811033936493033 0.4717166 0.26532704 prediction 0.418892852970044 Functional Gain - SPN ENSG00000197471 CDS Human protein_coding chr16:29675784 chr16:29675785 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_124904 0 0 1 SND1 POSTAR2 ENCODE chr16:29675773-29675851
64251 chr19 14512267 14512267 1 + C T SKCM 14512266 + 14512246 14512286 41 GAGGCCCTGGCGCCACCTGTCCGGCACCTCATAGCCACCCA GAGGCCCTGGCGCCACCTGTCTGGCACCTCATAGCCACCCA < 41bp 0.461072855340729 0.709445259478157 0.28041723 0.1573219 prediction 0.418890518956314 Functional Gain - ADGRE5 ENSG00000123146 CDS Human protein_coding chr19:14512266 chr19:14512267 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_124906 0 0 3 SND1 POSTAR2 ENCODE chr19:14512227-14512292
64251 chr17 61908868 61908868 1 + C T SKCM 61908867 + 61908847 61908887 41 TTTTCCTTGCCATCTCCAGGCCCGGCTGGACATTTTGAAGA TTTTCCTTGCCATCTCCAGGCTCGGCTGGACATTTTGAAGA < 41bp 0.619191329647682 0.828632073683648 0.022008061 0.035903543 prediction 0.418881488071932 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908867 chr17:61908868 synonymous SNV . 0 22 hm5C_associated_SNPs_124909 0 0 8 BUD13 POSTAR2 ENCODE chr17:61908845-61908945
64251 chr1 17188454 17188454 1 + C A rs530559305 17188450 + 17188430 17188470 41 GTGGTAGAATTCTCGCCTCCCACGCGGGAGACCCGGGTTCA GTGGTAGAATTCTCGCCTCCCACGAGGGAGACCCGGGTTCA < 41bp 0.324401380972374 0.709438108374627 0.24896845 0.27978653 prediction 0.418876216749254 Functional Gain - MIR3675;LOC440570 ENSG00000230239;ENSG00000228549 intergenic Human other chr1:17188450 chr1:17188454 . . 0 25 hm5C_associated_SNPs_124910 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1378377 chr1:17188440-17188480
64251 chr20 61598071 61598071 1 + C T COAD 61598070 + 61598050 61598090 41 CACAGGTGTGGCCAACACAGCCGGGGCCTTGGCAGGTGAGG CACAGGTGTGGCCAACACAGCTGGGGCCTTGGCAGGTGAGG < 41bp 0.488052143190879 0.709429168287551 0.84398896 0.4429527 prediction 0.418858336575102 Functional Gain - SLC17A9 ENSG00000101194 CDS Human protein_coding chr20:61598070 chr20:61598071 synonymous SNV . 0 22 hm5C_associated_SNPs_124919 0 0 5 BUD13 POSTAR2 ENCODE chr20:61598052-61598097
64251 chr2 170361315 170361315 1 + C G rs150152332 170361311 + 170361291 170361331 41 CACATGGCCTAGTAACCGTCCGGCCGCGGCGCTGGCTTAAG CACATGGCCTAGTAACCGTCCGGCGGCGGCGCTGGCTTAAG < 41bp 0.527732430747985 0.737161543637713 0.29034045 0.668547 prediction 0.418858225779456 Functional Gain - BBS5 ENSG00000163093 UTR3 Human protein_coding chr2:170361311 chr2:170361315 . . 0 25 hm5C_associated_SNPs_124920 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr2:170361302-170361331
64251 chr12 3050079 3050079 1 + C G rs555469931 3050078 + 3050058 3050098 41 CACCCCATCCTGAGGCACTGCCTGGCAGATAACCCTGGTTG CACCCCATCCTGAGGCACTGCGTGGCAGATAACCCTGGTTG < 41bp 0.438140418157465 0.709421158019466 0.14762369 0.41437262 prediction 0.418842316038932 Functional Gain - TULP3 ENSG00000078246 UTR3 Human protein_coding chr12:3050078 chr12:3050079 . . 0 22 hm5C_associated_SNPs_124924 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:3050063-3050095
64251 chr17 18144097 18144097 1 + C G rs57956221 18144096 + 18144076 18144116 41 CGGGCGTGGCCGCCCACTGCCCGAGCCCTACGAGGCCTCAC CGGGCGTGGCCGCCCACTGCCGGAGCCCTACGAGGCCTCAC < 41bp 0.384761612511139 0.70941729894041 0.4647843 0.9101286 prediction 0.418834597880819 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18144096 chr17:18144097 synonymous SNV . 0 22 hm5C_associated_SNPs_124926 0 0 2 SRSF1 POSTAR2 ENCODE chr17:18143990-18144115
64251 chr4 178274565 178274565 1 + A G rs2048074 178274562 + 178274542 178274582 41 CATACAGAAGTCAAGATCAACAGAAAAACTGCATTTGGAAC CATACAGAAGTCAAGATCAACAGGAAAACTGCATTTGGAAC < 41bp 0.496305319721617 0.709417093066096 0.5489932 0.8263 prediction 0.418834186132192 Functional Gain - NEIL3 ENSG00000109674 CDS Human protein_coding chr4:178274562 chr4:178274565 synonymous SNV . 0 24 hm5C_associated_SNPs_124927 0 1 2 UPF1 POSTAR2 GSE69586,GSM1704216 chr4:178274554-178274575
64251 chr3 63981841 63981841 1 + C T COAD 63981840 + 63981820 63981860 41 GTCAGGGAGGGGCCCCCCCACCGGGAGCCCTGCTGAATCCA GTCAGGGAGGGGCCCCCCCACTGGGAGCCCTGCTGAATCCA < 41bp 0.618295870513185 0.827711772759874 0.8836954 0.56648165 prediction 0.418831804493379 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63981840 chr3:63981841 synonymous SNV . 0 22 hm5C_associated_SNPs_124928 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:63981840-63981860
64251 chr16 50583404 50583404 1 + C T KIRP 50583403 + 50583383 50583423 41 TGGATCGGGAGACAGCGCTGCCCGGGCGGTGTCTCGGGACC TGGATCGGGAGACAGCGCTGCTCGGGCGGTGTCTCGGGACC < 41bp 0.454127599236151 0.709415897159881 0.65159714 0.7576734 prediction 0.418831794319762 Functional Gain - NKD1 ENSG00000140807 CDS Human protein_coding chr16:50583403 chr16:50583404 nonsynonymous SNV 0.674 0 22 hm5C_associated_SNPs_124929 0 0 4 GRWD1 POSTAR2 ENCODE chr16:50583383-50583469
64251 chr12 6421412 6421412 1 + C T SKCM 6421411 + 6421391 6421431 41 GGATGAAGGCCTTTGGTCCTCCACATGAGGGCCCCCTCCAA GGATGAAGGCCTTTGGTCCTCTACATGAGGGCCCCCTCCAA < 41bp 0.590248442085154 0.799656012916253 0.9201517 0.95168173 prediction 0.418815141662197 Functional Gain - PLEKHG6 ENSG00000008323 CDS Human protein_coding chr12:6421411 chr12:6421412 nonsynonymous SNV 0.070 1 22 hm5C_associated_SNPs_124935 0 0 1 DDX3X POSTAR2 ENCODE chr12:6421324-6421506
64251 chr5 68805133 68805133 1 + T C STAD 68805130 + 68805110 68805150 41 ATTCGGATCCTGTCTATGCTCATTATTGTGATGTGCATTGC ATTCGGATCCTGTCTATGCTCATCATTGTGATGTGCATTGC < 41bp 0.547442470438312 0.756840129137445 0.20074186 0.24610353 prediction 0.418795317398264 Functional Gain - OCLN ENSG00000197822 CDS Human protein_coding chr5:68805130 chr5:68805133 synonymous SNV . 0 24 hm5C_associated_SNPs_124940 0 0 6 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr5:68805080-68805140
64251 chr17 18111594 18111594 1 + C T LUAD 18111593 + 18111573 18111613 41 TCGGTGCTGCTGCCCACACACCGGCGGAGGGGTAGCTTCAG TCGGTGCTGCTGCCCACACACTGGCGGAGGGGTAGCTTCAG < 41bp 0.593447599528803 0.802838125765445 0.8441355 0.65734863 prediction 0.418781052473284 Functional Gain - ALKBH5 ENSG00000091542 CDS Human protein_coding chr17:18111593 chr17:18111594 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_124942 0 0 16 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:18111530-18111595
64251 chr1 110168322 110168322 1 + T C CESC 110168319 + 110168299 110168339 41 TCACTGGCTGAGAGCGAGCTCCGTAGTGCCCCGTATGAGTT TCACTGGCTGAGAGCGAGCTCCGCAGTGCCCCGTATGAGTT < 41bp 0.526545768590853 0.735922490177476 0.22648492 0.2514861 prediction 0.418753443173247 Functional Gain - AMPD2 ENSG00000116337 CDS Human protein_coding chr1:110168319 chr1:110168322 synonymous SNV . 0 24 hm5C_associated_SNPs_124945 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:110168292-110168322
64251 chr6 43099815 43099815 1 + C T LUSC 43099814 + 43099794 43099834 41 TCTCTGCTGCTGACCCAGGTCCGGCCACGCAATGCAGGGAT TCTCTGCTGCTGACCCAGGTCTGGCCACGCAATGCAGGGAT < 41bp 0.457233199366794 0.709375004829532 0.3194949 0.21699476 prediction 0.418750009659065 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43099814 chr6:43099815 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_124946 0 0 3 RPS3 POSTAR2 ENCODE chr6:43099787-43099817
64251 chr4 37979052 37979052 1 + C G rs574894198 37979051 + 37979031 37979071 41 CCAAGCCCGCCCCCGGCCGCCCGCGGGCCCACGGGCCGGCG CCAAGCCCGCCCCCGGCCGCCGGCGGGCCCACGGGCCGGCG < 41bp 0.663910339813316 0.873282801737577 0.19957152 0.6992372 prediction 0.418744923848521 Functional Gain - TBC1D1 ENSG00000065882 UTR5 Human protein_coding chr4:37979051 chr4:37979052 . . 0 22 hm5C_associated_SNPs_124948 0 0 2 DDX3X POSTAR2 ENCODE chr4:37979004-37979101
64251 chr19 42406950 42406950 1 + C T STAD 42406949 + 42406929 42406969 41 CGCAGGAAGCTGAGAGCCGCCCGCGGTGCCGCCGCCTGCAG CGCAGGAAGCTGAGAGCCGCCTGCGGTGCCGCCGCCTGCAG < 41bp 0.617681914142385 0.827053769802515 0.333271 0.32202494 prediction 0.41874371132026 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42406949 chr19:42406950 nonsynonymous SNV 0.494 4 22 hm5C_associated_SNPs_124950 0 0 3 FMR1 POSTAR2 ENCODE chr19:42406933-42406964
64251 chr1 153752369 153752369 1 + C G OV 153752368 + 153752348 153752388 41 TGGCAAATGAGGGCTTCGACCCCAGCACCCTGTCTGACCCA TGGCAAATGAGGGCTTCGACCGCAGCACCCTGTCTGACCCA < 41bp 0.383913290504976 0.709371691412555 0.27766758 0.8727279 prediction 0.41874338282511 Functional Gain - SLC27A3 ENSG00000143554 CDS Human protein_coding chr1:153752368 chr1:153752369 nonsynonymous SNV 0.252 4 22 hm5C_associated_SNPs_124951 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:153752354-153752391
64251 chr8 146278082 146278082 1 + C A OV 146278081 + 146278061 146278101 41 TTCCAGCGCCCGGAATCCTTCCACTGTCTGTCTCTGCCCAG TTCCAGCGCCCGGAATCCTTCAACTGTCTGTCTCTGCCCAG < 41bp 0.624694570788548 0.834057951353392 0.16924044 0.2505026 prediction 0.418726761129687 Functional Gain - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278081 chr8:146278082 synonymous SNV . 0 22 hm5C_associated_SNPs_124953 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:146278019-146278086
64251 chr15 55611331 55611331 1 + C A rs59887243 55611330 + 55611310 55611350 41 GGTGGGAGCTACGAAGTTGCCCGTTCCCGGTTACTTCCGGG GGTGGGAGCTACGAAGTTGCCAGTTCCCGGTTACTTCCGGG < 41bp 0.532432586469515 0.741786402004962 0.35855886 0.38948005 prediction 0.418707631070893 Functional Gain - PIGB;PIGBOS1 ENSG00000225973 ncRNA_exonic Human protein_coding chr15:55611330 chr15:55611331 . . 0 22 hm5C_associated_SNPs_124956 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:55611321-55611341
64251 chr19 49514506 49514506 1 + C T LUSC 49514505 + 49514485 49514525 41 GAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACAT GAGAGCTTCTCCTTCCTCAACTGGGCCCTGGAGAGTGACAT < 41bp 0.45103312979162 0.70934906761097 0.6138653 0.35536382 prediction 0.418698135221941 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49514505 chr19:49514506 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_124958 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:49514479-49514523
64251 chr3 42642163 42642163 1 + C A rs190057555 42642162 + 42642142 42642182 41 TTAGCGTGGCATTGGGAGGCCCGGCCTGGGGGAGGAGACGG TTAGCGTGGCATTGGGAGGCCAGGCCTGGGGGAGGAGACGG < 41bp 0.487547057829611 0.709338751849852 0.9396583 0.9470437 prediction 0.418677503699704 Functional Gain - NKTR ENSG00000114857 UTR5 Human protein_coding chr3:42642162 chr3:42642163 . . 0 22 hm5C_associated_SNPs_124961 0 0 4 NCBP2 POSTAR2 ENCODE chr3:42642160-42642227
64251 chr11 18624655 18624655 1 + A G rs7935601 18624652 + 18624632 18624672 41 CTTCGTGGGTACACCACCAGCTGAGAAAGAAGCCTCATGAT CTTCGTGGGTACACCACCAGCTGGGAAAGAAGCCTCATGAT < 41bp 0.560051129120536 0.769386695290255 0.7316956 0.72251993 prediction 0.41867113233944 Functional Gain - SPTY2D1-AS1 ENSG00000247595 ncRNA_exonic Human protein_coding chr11:18624652 chr11:18624655 . . 0 24 hm5C_associated_SNPs_124963 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:18624646-18624682
64251 chr5 145849155 145849155 1 + A G GBM 145849152 + 145849132 145849172 41 TATCGTACCCATGATACATCCCCAGGTTGCTATTGCAGCTT TATCGTACCCATGATACATCCCCGGGTTGCTATTGCAGCTT < 41bp 0.464026248160003 0.70932954713961 0.02597475 0.12943292 prediction 0.418659094279221 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145849152 chr5:145849155 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_124967 0 0 13 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:145849140-145849160
64251 chr7 65338370 65338370 1 + C G rs552596206 65338366 + 65338346 65338386 41 CGGCGGCGGGAAGATGGCGGCTCCCGTCCTGCTAAGAGTGT CGGCGGCGGGAAGATGGCGGCTCCGGTCCTGCTAAGAGTGT < 41bp 0.629693783196287 0.839017907655988 0.17061526 0.23465037 prediction 0.418648248919402 Functional Gain - VKORC1L1 ENSG00000196715 CDS Human protein_coding chr7:65338366 chr7:65338370 synonymous SNV . 0 25 hm5C_associated_SNPs_124971 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:65338360-65338380
64251 chr20 62373395 62373395 1 + C G BLCA 62373394 + 62373374 62373414 41 TTTCTGTTTGGGGAGCCCACCCTGAGAAAAAGGAAGGTGAG TTTCTGTTTGGGGAGCCCACCGTGAGAAAAAGGAAGGTGAG < 41bp 0.392769473468969 0.709316169344144 0.10420185 0.4410477 prediction 0.418632338688288 Functional Gain - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373394 chr20:62373395 nonsynonymous SNV 0.399 0 22 hm5C_associated_SNPs_124977 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:62373377-62373401
64251 chr2 20647623 20647623 1 + C A STAD 20647622 + 20647602 20647642 41 CATGTCCGCACAGAGCTGGCCCGCATGAAGCAGGAACCCGT CATGTCCGCACAGAGCTGGCCAGCATGAAGCAGGAACCCGT < 41bp 0.6163401617786 0.825653903534802 0.14672303 0.19535941 prediction 0.418627483512403 Functional Gain - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647622 chr2:20647623 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_124980 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:20647460-20647640
64251 chr2 67626364 67626364 1 + C G HNSC 67626363 + 67626343 67626383 41 TGTCATCTTCCTTCAGTTCTCCTAATGATCCAGATGGACAG TGTCATCTTCCTTCAGTTCTCGTAATGATCCAGATGGACAG < 41bp 0.393670051806349 0.709312981612805 0.039262295 0.23673028 prediction 0.41862596322561 Functional Gain - ETAA1 ENSG00000143971 CDS Human protein_coding chr2:67626363 chr2:67626364 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_124982 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:67626345-67626369
64251 chr8 37963065 37963065 1 + C A LUSC 37963064 + 37963044 37963084 41 CGCGAGAAGTCCAGGGGTGGCCGTGATGGCGGCGGCAGGAG CGCGAGAAGTCCAGGGGTGGCAGTGATGGCGGCGGCAGGAG < 41bp 0.607103414281898 0.81641095786135 0.8952415 0.9076217 prediction 0.418615087158903 Functional Gain - ASH2L ENSG00000129691 UTR5 Human protein_coding chr8:37963064 chr8:37963065 . . 0 22 hm5C_associated_SNPs_124983 0 0 2 NCBP2 POSTAR2 ENCODE chr8:37963051-37963173
64251 chr18 72776355 72776355 1 + C T UCEC 72776354 + 72776334 72776374 41 GGCCAGCGTGGTCATCTACACCCAGGAGGGCTCCTCGGCCG GGCCAGCGTGGTCATCTACACTCAGGAGGGCTCCTCGGCCG < 41bp 0.48251512115833 0.709307128755815 0.048822105 0.067548335 prediction 0.418614257511629 Functional Gain - ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72776354 chr18:72776355 synonymous SNV . 0 22 hm5C_associated_SNPs_124985 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:72776334-72776356
64251 chr16 77228641 77228641 1 + C T UCEC 77228640 + 77228620 77228660 41 CCAGGAGCGAAATGTGCTGGCCGAGTGCCGGCTGGACCCAG CCAGGAGCGAAATGTGCTGGCTGAGTGCCGGCTGGACCCAG < 41bp 0.463681833573813 0.709302841336043 0.44901684 0.16890952 prediction 0.418605682672086 Functional Gain - MON1B ENSG00000103111 CDS Human protein_coding chr16:77228640 chr16:77228641 synonymous SNV . 0 22 hm5C_associated_SNPs_124986 0 0 2 RBM15 POSTAR2 ENCODE chr16:77228635-77228657
64251 chr19 10220353 10220353 1 + C T SKCM 10220352 + 10220332 10220372 41 GCCTCCTCATCGACTACAACCCCGACTCCCAGGAGCTGGAC GCCTCCTCATCGACTACAACCTCGACTCCCAGGAGCTGGAC < 41bp 0.640810869108353 0.850108245069818 0.03539309 0.31310505 prediction 0.418594751922929 Functional Gain - PPAN;PPAN-P2RY11 ENSG00000130810;ENSG00000243207 CDS Human other chr19:10220352 chr19:10220353 nonsynonymous SNV 0.282 1 22 hm5C_associated_SNPs_124989 0 0 9 EIF3G POSTAR2 GSE65004,GSM1585674 chr19:10220333-10220363
64251 chr10 89474791 89474791 1 + C A SKCM 89474790 + 89474770 89474810 41 ATATCCACGAACTCTTTGTGCCGGAAAACAAACTTGACCAC ATATCCACGAACTCTTTGTGCAGGAAAACAAACTTGACCAC < 41bp 0.631245051297279 0.840531682449311 0.36571404 0.38448906 prediction 0.418573262304064 Functional Gain - PAPSS2 ENSG00000198682 CDS Human protein_coding chr10:89474790 chr10:89474791 nonsynonymous SNV 0.948 2 22 hm5C_associated_SNPs_124996 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr10:89474762-89474793
64251 chr7 5108406 5108406 1 + T G rs568699333 5108404 + 5108384 5108424 41 ACTGCACAAAACAGAACTATCTTAAGGCACATGTGCAATGG ACTGCACAAAACAGAACTATCTGAAGGCACATGTGCAATGG < 41bp 0.464134571075957 0.709283790853382 0.023648798 0.12983 prediction 0.418567581706765 Functional Gain - RBAK ENSG00000146587 UTR3 Human protein_coding chr7:5108404 chr7:5108406 . . 0 23 hm5C_associated_SNPs_124997 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:5108380-5108442
64251 chr17 78079677 78079677 1 + C G rs113085339 78079674 + 78079654 78079694 41 TCGGGGTGATCGTGCGCCGGCAGCTGGACGGCCGCGTGCTG TCGGGGTGATCGTGCGCCGGCAGGTGGACGGCCGCGTGCTG < 41bp 0.500906347681393 0.710187704252697 0.38105083 0.8111365 prediction 0.418562713142609 Functional Gain - GAA ENSG00000171298 CDS Human protein_coding chr17:78079674 chr17:78079677 nonsynonymous SNV 0.248 1 24 hm5C_associated_SNPs_124999 1 0 3 NOL12 POSTAR2 ENCODE chr17:78079631-78079690
64251 chr16 67911683 67911683 1 + A G COAD 67911680 + 67911660 67911700 41 TGGACATGCTCCGCTCCAGCCACAGTACCTGGCCTGTGGAT TGGACATGCTCCGCTCCAGCCACGGTACCTGGCCTGTGGAT < 41bp 0.490376521744344 0.709279345248267 0.37790596 0.6464684 prediction 0.418558690496534 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67911680 chr16:67911683 nonsynonymous SNV 0.869 1 24 hm5C_associated_SNPs_125000 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr16:67911667-67911701
64251 chr22 38455293 38455293 1 + C T UCEC 38455292 + 38455272 38455312 41 CTGCAGAAGGATGCTCAGAACCTGATCGGGATCAGCATTGG CTGCAGAAGGATGCTCAGAACTTGATCGGGATCAGCATTGG < 41bp 0.629804446735371 0.839079325545647 0.038161546 0.030449212 prediction 0.418549757620553 Functional Gain - PICK1 ENSG00000100151 CDS Human protein_coding chr22:38455292 chr22:38455293 synonymous SNV . 0 22 hm5C_associated_SNPs_125002 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:38455272-38455309
64251 chr12 54423489 54423489 1 + T C UCEC 54423486 + 54423466 54423506 41 GCGGCCGCCAGATCTACTCGCGGTACCAGACCCTGGAACTG GCGGCCGCCAGATCTACTCGCGGCACCAGACCCTGGAACTG < 41bp 0.497227566255649 0.709273821089315 0.88514197 0.8901743 prediction 0.418547642178629 Functional Gain - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54423486 chr12:54423489 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_125003 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:54423478-54423525
64251 chr2 231740398 231740398 1 + C T SKCM 231740397 + 231740377 231740417 41 GACTCCCTGTCCTCCCAGGTCCGGACTCAGATGGAGCTGGA GACTCCCTGTCCTCCCAGGTCTGGACTCAGATGGAGCTGGA < 41bp 0.627507341352867 0.836756356371705 0.34619403 0.29319924 prediction 0.418498030037676 Functional Gain - ITM2C ENSG00000135916 CDS Human protein_coding chr2:231740397 chr2:231740398 nonsynonymous SNV 0.196 3 22 hm5C_associated_SNPs_125015 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:231740372-231740405
64251 chr2 143676236 143676236 1 + T G LUAD 143676234 + 143676214 143676254 41 TCTATTTCTTGGGAAATTCTCTTGGCCTTCAACCAAAAATG TCTATTTCTTGGGAAATTCTCTGGGCCTTCAACCAAAAATG < 41bp 0.376648873902847 0.709248534664714 0.23957652 0.9002251 prediction 0.418497069329429 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143676234 chr2:143676236 synonymous SNV . 0 23 hm5C_associated_SNPs_125016 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003587 chr2:143676233-143676254
64251 chr6 43100256 43100256 1 + C G rs148837055 43100252 + 43100232 43100272 41 CCCCAAGGGTCTGCCAGAGCCCAGCGTGTGGTGGGAGCACG CCCCAAGGGTCTGCCAGAGCCCAGGGTGTGGTGGGAGCACG < 41bp 0.412701350449776 0.709245962672749 0.1789903 0.3494134 prediction 0.418491925345498 Functional Gain - PTK7 ENSG00000112655 CDS Human protein_coding chr6:43100252 chr6:43100256 nonsynonymous SNV 0.972 0 25 hm5C_associated_SNPs_125017 0 0 3 RPS3 POSTAR2 ENCODE chr6:43100202-43100325
64251 chr3 56647717 56647717 1 + A G UCEC 56647714 + 56647694 56647734 41 AGAAGAGGAGCTTCGCTTAGCACAGGAACGTGAAGAGATGC AGAAGAGGAGCTTCGCTTAGCACGGGAACGTGAAGAGATGC < 41bp 0.550784037361276 0.760019855166836 0.41129744 0.7910905 prediction 0.418471635611121 Functional Gain - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56647714 chr3:56647717 nonsynonymous SNV 0.887 0 24 hm5C_associated_SNPs_125021 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:56647710-56647732
64251 chr22 50649339 50649339 1 + C T PRAD 50649338 + 50649318 50649358 41 CCTGGAGACCATGCATCTGACCGGTGAGTGACCCAGCCGTG CCTGGAGACCATGCATCTGACTGGTGAGTGACCCAGCCGTG < 41bp 0.581791807957983 0.791026784175977 0.5914667 0.4791934 prediction 0.418469952435987 Functional Gain - SELENOO ENSG00000073169 CDS Human protein_coding chr22:50649338 chr22:50649339 unknown . 0 22 hm5C_associated_SNPs_125022 0 0 3 DDX24 POSTAR2 ENCODE chr22:50649308-50649341
64251 chr7 63808697 63808697 1 + A G LIHC 63808694 + 63808674 63808714 41 TGTCAATGTAATAAATGTGGCAGAGGTTTTCAGTTGTGCTC TGTCAATGTAATAAATGTGGCAGGGGTTTTCAGTTGTGCTC < 41bp 0.580983735635543 0.79021847773033 0.3140742 0.8765564 prediction 0.418469484189575 Functional Gain - ZNF736 ENSG00000234444 CDS Human protein_coding chr7:63808694 chr7:63808697 synonymous SNV . 0 24 hm5C_associated_SNPs_125023 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:63808695-63808731
64251 chr18 7955352 7955352 1 + C A OV 7955348 + 7955328 7955368 41 GAGATTAGTGTGCTCCTGACCAGGCCAGGGGAGGGTGGCAC GAGATTAGTGTGCTCCTGACCAGGACAGGGGAGGGTGGCAC < 41bp 0.368409060227585 0.709232437624439 0.35516292 0.3810268 prediction 0.418464875248878 Functional Gain - PTPRM ENSG00000173482 CDS Human protein_coding chr18:7955348 chr18:7955352 nonsynonymous SNV 0.957 5 25 hm5C_associated_SNPs_125027 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:7955337-7955395
64251 chrX 153993215 153993215 1 + A G BRCA 153993212 + 153993192 153993232 41 AACATAAGAAGAAAAAGGAGCGGAAGTCATTGCCAGAAGAA AACATAAGAAGAAAAAGGAGCGGGAGTCATTGCCAGAAGAA < 41bp 0.565356902505259 0.774585672639113 0.37677884 0.87755567 prediction 0.418457540267708 Functional Gain - DKC1 ENSG00000130826 CDS Human protein_coding chrX:153993212 chrX:153993215 nonsynonymous SNV 0.965 3 24 hm5C_associated_SNPs_125029 0 0 21 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:153993186-153993239
64251 chr16 20857562 20857562 1 + C T rs118109402 20857561 + 20857541 20857581 41 AGACTCTGAAACTGGACCACCCGAAGATAGCAGCCTGGCGC AGACTCTGAAACTGGACCACCTGAAGATAGCAGCCTGGCGC < 41bp 0.448492320510441 0.709224344269062 0.3878852 0.19047964 prediction 0.418448688538123 Functional Gain - REXO5 ENSG00000005189 CDS Human protein_coding chr16:20857561 chr16:20857562 nonsynonymous SNV 0.976 0 22 hm5C_associated_SNPs_125030 0 0 2 BUD13 POSTAR2 ENCODE chr16:20857548-20857628
64251 chr8 145745391 145745391 1 + C T rs114536271 145745390 + 145745370 145745410 41 TGTTATCCTGGGGCTGACTGCCCGGCTCCACACCTCAGAGC TGTTATCCTGGGGCTGACTGCTCGGCTCCACACCTCAGAGC < 41bp 0.601093129554625 0.810309007595244 0.34699798 0.38893116 prediction 0.41843175608124 Functional Gain - LRRC14 ENSG00000160959 CDS Human protein_coding chr8:145745390 chr8:145745391 synonymous SNV . 0 22 hm5C_associated_SNPs_125034 0 0 1 DDX3X POSTAR2 ENCODE chr8:145745349-145745398
64251 chr9 2039592 2039592 1 + C T UCEC 2039591 + 2039571 2039611 41 GGGCCCTCATCCCAGGTGATCCGCAGGCCATGAGCCAGCCC GGGCCCTCATCCCAGGTGATCTGCAGGCCATGAGCCAGCCC < 41bp 0.613404204814924 0.822617799585936 0.64133966 0.79372233 prediction 0.418427189542023 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2039591 chr9:2039592 nonsynonymous SNV 0.802 0 22 hm5C_associated_SNPs_125035 1 0 1 YBX3 POSTAR2 ENCODE chr9:2039539-2039629
64251 chr22 21800636 21800636 1 + C T STAD 21800635 + 21800615 21800655 41 CGAGACAGGCAGTGGGGGTGCCGAGGAGGAGGCCGAGGACC CGAGACAGGCAGTGGGGGTGCTGAGGAGGAGGCCGAGGACC < 41bp 0.483754196519837 0.709210746816511 0.88951397 0.890748 prediction 0.418421493633022 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800635 chr22:21800636 synonymous SNV . 0 22 hm5C_associated_SNPs_125037 0 0 11 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr22:21800620-21800640
64251 chr5 140480895 140480895 1 + C G rs564746714 140480894 + 140480874 140480914 41 CGCTGGACGGCGGCTCTCCCCCTCGGTCTGGGACAGCCCAG CGCTGGACGGCGGCTCTCCCCGTCGGTCTGGGACAGCCCAG < 41bp 0.385106864407658 0.709204666362442 0.09891474 0.3998553 prediction 0.418409332724884 Functional Gain - PCDHB3 ENSG00000113205 CDS Human protein_coding chr5:140480894 chr5:140480895 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_125040 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr5:140480883-140480909
64251 chr2 54880747 54880747 1 + T G STAD 54880743 + 54880723 54880763 41 TCATCCCCTACATGGCTTCACAGGTGAGGCAGCTGCAGGAG TCATCCCCTACATGGCTTCACAGGGGAGGCAGCTGCAGGAG < 41bp 0.496238167823527 0.709202051613335 0.9128511 0.9360156 prediction 0.41840410322667 Functional Gain - SPTBN1 ENSG00000115306 CDS Human protein_coding chr2:54880743 chr2:54880747 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_125042 0 0 9 FMR1 POSTAR2 ENCODE chr2:54880745-54880783
64251 chr20 25276257 25276257 1 + A G UCEC 25276254 + 25276234 25276274 41 TTCCAGGTTCAAGGTGTTTGCAGACTATGAAGCCTACATGC TTCCAGGTTCAAGGTGTTTGCAGGCTATGAAGCCTACATGC < 41bp 0.453622705365089 0.709195703843166 0.86890346 0.9022605 prediction 0.418391407686332 Functional Gain - PYGB ENSG00000100994 CDS Human protein_coding chr20:25276254 chr20:25276257 nonsynonymous SNV 0.889 5 24 hm5C_associated_SNPs_125043 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:25276254-25276273
64251 chr19 17836824 17836824 1 + C A UCEC 17836823 + 17836803 17836843 41 TCTGAGGGCCTGTGCGAATTCCTGGAGTACGTGGCTGAGTC TCTGAGGGCCTGTGCGAATTCATGGAGTACGTGGCTGAGTC < 41bp 0.615148440681956 0.824343137004939 0.8874874 0.9030632 prediction 0.418389392645966 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17836823 chr19:17836824 nonsynonymous SNV 0.111 1 22 hm5C_associated_SNPs_125044 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr19:17836803-17836847
64251 chrX 117764451 117764451 1 + A G UCEC 117764448 + 117764428 117764468 41 GTATATAGTAAAAATGATTTCAGAAGGTGAGTTACCATCAT GTATATAGTAAAAATGATTTCAGGAGGTGAGTTACCATCAT < 41bp 0.535066692319498 0.744258766458475 0.7541442 0.9171834 prediction 0.418384148277952 Functional Gain - DOCK11 ENSG00000147251 CDS Human protein_coding chrX:117764448 chrX:117764451 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_125045 0 0 1 PUM2 POSTAR2 ENCODE chrX:117764381-117764454
64251 chr19 30936381 30936381 1 + C T OV 30936380 + 30936360 30936400 41 ACCGAGTGCCCCGACTGCGGCCGGGTGTTCCGCACTTACCA ACCGAGTGCCCCGACTGCGGCTGGGTGTTCCGCACTTACCA < 41bp 0.474878849648456 0.709188999549554 0.922595 0.887285 prediction 0.418377999099108 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30936380 chr19:30936381 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_125048 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr19:30936367-30936391
64251 chr16 31122537 31122537 1 + T C UCEC 31122535 + 31122515 31122555 41 CCGGAGCTGCTCAAGAATGCCATGAGGTGGGGTGGCTTGAT CCGGAGCTGCTCAAGAATGCCACGAGGTGGGGTGGCTTGAT < 41bp 0.655304106142988 0.864490577743955 0.4394868 0.41658476 prediction 0.418372943201934 Functional Gain - BCKDK ENSG00000103507 CDS Human protein_coding chr16:31122535 chr16:31122537 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_125049 0 0 4 PPIG POSTAR2 ENCODE chr16:31122490-31122565
64251 chr16 85688423 85688423 1 + T C UCEC 85688421 + 85688401 85688441 41 CTCCAGCGGCCCGTGCACCACGTGGTGCCCCCCAGTACCGT CTCCAGCGGCCCGTGCACCACGCGGTGCCCCCCAGTACCGT < 41bp 0.623798518347856 0.83297874900799 0.7229876 0.46555904 prediction 0.418360461320266 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85688421 chr16:85688423 nonsynonymous SNV 0.917 1 23 hm5C_associated_SNPs_125051 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:85688406-85688435
64251 chr2 27320383 27320383 1 + T C KIRC 27320381 + 27320361 27320401 41 CCTGTACCAGGGCCGGAACGCATCGGAGCAGGTGAAGATGC CCTGTACCAGGGCCGGAACGCACCGGAGCAGGTGAAGATGC < 41bp 0.630734420575559 0.839906321881934 0.571372 0.6728687 prediction 0.418343802612749 Functional Gain - KHK ENSG00000138030 CDS Human protein_coding chr2:27320381 chr2:27320383 nonsynonymous SNV 0.084 0 23 hm5C_associated_SNPs_125055 0 0 3 BUD13 POSTAR2 ENCODE chr2:27320345-27320395
64251 chr22 21133918 21133918 1 + T C GBM 21133915 + 21133895 21133935 41 CTGTCAGTTTCCCCGACAGACTCTGATGTGAGTGCTGGGAA CTGTCAGTTTCCCCGACAGACTCCGATGTGAGTGCTGGGAA < 41bp 0.484164096763189 0.709170817040576 0.08270803 0.14037555 prediction 0.418341634081151 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21133915 chr22:21133918 synonymous SNV . 0 24 hm5C_associated_SNPs_125056 0 0 3 RPS3 POSTAR2 ENCODE chr22:21133883-21133920
64251 chr19 19612198 19612198 1 + C T LUAD 19612197 + 19612177 19612217 41 ACAGGCCAAGGCCGAGCCCACCGCTGCCCCACACCCCGTGC ACAGGCCAAGGCCGAGCCCACTGCTGCCCCACACCCCGTGC < 41bp 0.464365490261727 0.709169906512809 0.23928347 0.26014698 prediction 0.418339813025619 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19612197 chr19:19612198 synonymous SNV . 0 22 hm5C_associated_SNPs_125057 0 0 1 BUD13 POSTAR2 ENCODE chr19:19612156-19612228
64251 chr1 150923461 150923461 1 + C T SKCM 150923460 + 150923440 150923480 41 AGATTGACACAACCCCTCCACCCCAGGTGGCCTACAGCAAG AGATTGACACAACCCCTCCACTCCAGGTGGCCTACAGCAAG < 41bp 0.420315509114442 0.709160951028665 0.020704478 0.7974205 prediction 0.418321902057331 Functional Gain - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150923460 chr1:150923461 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_125061 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:150923454-150923482
64251 chr19 58774175 58774175 1 + C G rs115838736 58774174 + 58774154 58774194 41 AGGTCTCCCCTCATCATGCACCAGAGGACGCATGTCGGTGG AGGTCTCCCCTCATCATGCACGAGAGGACGCATGTCGGTGG < 41bp 0.673089368982022 0.882246708261149 0.41190827 0.8762492 prediction 0.418314678558254 Functional Gain - ZNF544 ENSG00000268516 ncRNA_intronic Human antisense chr19:58774174 chr19:58774175 . . 0 22 hm5C_associated_SNPs_125064 0 0 1 YWHAG POSTAR2 ENCODE chr19:58774142-58774183
64251 chr7 48147076 48147076 1 + C T rs75887102 48147075 + 48147055 48147095 41 GATGGAGTCCTCGGTGTTTGCCGCCATGTGCAGCGCCTGCG GATGGAGTCCTCGGTGTTTGCTGCCATGTGCAGCGCCTGCG < 41bp 0.60636406299411 0.81552125360329 0.4752773 0.25913757 prediction 0.41831438121836 Functional Gain - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48147075 chr7:48147076 synonymous SNV . 0 22 hm5C_associated_SNPs_125065 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:48147050-48147084
64251 chr16 2817066 2817066 1 + C T SKCM 2817065 + 2817045 2817085 41 GCCAGAAAATCATGCTCAGTCCAGGATTGCACTTGCCCTGA GCCAGAAAATCATGCTCAGTCTAGGATTGCACTTGCCCTGA < 41bp 0.470441673427051 0.709133728508421 0.21162862 0.080322236 prediction 0.418267457016842 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2817065 chr16:2817066 synonymous SNV . 0 22 hm5C_associated_SNPs_125080 0 0 34 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:2817058-2817084
64251 chr6 26045867 26045867 1 + C A SKCM 26045866 + 26045846 26045886 41 CGCCTGGTGCGAGAAATCGCCCAGGACTTCAAAACCGACCT CGCCTGGTGCGAGAAATCGCCAAGGACTTCAAAACCGACCT < 41bp 0.614155171767342 0.823278827711548 0.29243198 0.83905065 prediction 0.41824731188841 Functional Gain - HIST1H3C ENSG00000196532 CDS Human other chr6:26045866 chr6:26045867 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_125083 0 0 3 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr6:26045860-26045882
64251 chr11 93521311 93521311 1 + A G UCEC 93521308 + 93521288 93521328 41 TATGACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCCAA TATGACTCTTGATCCTGTCTCTCGGGATGCACTTCCTCCAA < 41bp 0.585876379924352 0.795000010180716 0.016596794 0.07941595 prediction 0.418247260512728 Functional Gain - MED17 ENSG00000042429 CDS Human protein_coding chr11:93521308 chr11:93521311 nonsynonymous SNV 0.998 2 24 hm5C_associated_SNPs_125084 0 0 1 YBX3 POSTAR2 ENCODE chr11:93521282-93521332
64251 chr2 232574963 232574963 1 + C G rs371087536 232574962 + 232574942 232574982 41 CCCGGCCGACCGACGCGCGACCCGCGCGCGTGCCACTGCAA CCCGGCCGACCGACGCGCGACGCGCGCGCGTGCCACTGCAA < 41bp 0.405169032777307 0.709120963560298 0.08712411 0.25576895 prediction 0.418241927120595 Functional Gain - PTMA ENSG00000187514 CDS Human protein_coding chr2:232574962 chr2:232574963 synonymous SNV . 0 22 hm5C_associated_SNPs_125085 0 0 7 DGCR8 POSTAR2 ENCODE chr2:232574931-232574965
64251 chr7 100731849 100731849 1 + C T HNSC 100731848 + 100731828 100731868 41 CTGGAGATGGAGCCCAGACCCCAAAAGAGGAAAAAGCCCAG CTGGAGATGGAGCCCAGACCCTAAAAGAGGAAAAAGCCCAG < 41bp 0.575398722636756 0.784512396208394 0.18535635 0.23219582 prediction 0.418227347143275 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731848 chr7:100731849 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_125087 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:100731820-100731862
64251 chr4 100521752 100521752 1 + T G SARC 100521748 + 100521728 100521768 41 GCTGGTGGATGCTGTCACCTCTGCTCAGACCTCAGACTCAT GCTGGTGGATGCTGTCACCTCTGCGCAGACCTCAGACTCAT < 41bp 0.515949726600082 0.725061582348266 0.122870475 0.17489347 prediction 0.418223711496367 Functional Gain - MTTP ENSG00000138823 CDS Human protein_coding chr4:100521748 chr4:100521752 synonymous SNV . 0 25 hm5C_associated_SNPs_125089 0 0 5 LIN28B POSTAR2 ENCODE chr4:100521719-100521759
64251 chr17 40715058 40715058 1 + T G STAD 40715054 + 40715034 40715074 41 CAGCTAGTGCGTTACGCCACCAGCTGTTACAGCTGTTGTCC CAGCTAGTGCGTTACGCCACCAGCGGTTACAGCTGTTGTCC < 41bp 0.500653000773807 0.709760424506177 0.9221816 0.89948326 prediction 0.418214847464741 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40715054 chr17:40715058 nonsynonymous SNV 0.998 2 25 hm5C_associated_SNPs_125095 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr17:40715040-40715060
64251 chr1 6279483 6279483 1 + C T rs370592083 6279482 + 6279462 6279502 41 ACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGA ACTTAGCAAATGGGACCGGTCTCCAGGGTCAGGCTCTTAGA < 41bp 0.466588185228612 0.709104634537774 0.052042484 0.9325621 prediction 0.418209269075548 Functional Gain - RNF207 ENSG00000158286 UTR3 Human protein_coding chr1:6279482 chr1:6279483 . . 0 22 hm5C_associated_SNPs_125097 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:6279478-6279516
64251 chr9 128122903 128122903 1 + A G LUSC 128122900 + 128122880 128122920 41 GGGACAAAGTGCAGTGCATCCTGAGAATGTGCTCTACGATT GGGACAAAGTGCAGTGCATCCTGGGAATGTGCTCTACGATT < 41bp 0.559899551830113 0.769000093434541 0.12278134 0.44608665 prediction 0.418201083208858 Functional Gain - GAPVD1 ENSG00000165219 CDS Human protein_coding chr9:128122900 chr9:128122903 nonsynonymous SNV 0.989 4 24 hm5C_associated_SNPs_125099 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr9:128122871-128122918
64251 chr5 82837347 82837347 1 + A G UCEC 82837344 + 82837324 82837364 41 CAGTGAAGCCTCTGGACACACAGAGATCCCCCAGCCCAGTG CAGTGAAGCCTCTGGACACACAGGGATCCCCCAGCCCAGTG < 41bp 0.476296622890829 0.709096206622403 0.8640369 0.9178828 prediction 0.418192413244805 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82837344 chr5:82837347 nonsynonymous SNV 0.041 2 24 hm5C_associated_SNPs_125102 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:82837345-82837383
64251 chr12 56619248 56619248 1 + T C rs115763630 56619245 + 56619225 56619265 41 ATCAATATCTCTGTCTGGGACGATGTTGGCAATCTGATCCA ATCAATATCTCTGTCTGGGACGACGTTGGCAATCTGATCCA < 41bp 0.537044199102095 0.746139433459639 0.35882938 0.41034815 prediction 0.418190468715088 Functional Gain - NABP2 ENSG00000139579 CDS Human protein_coding chr12:56619245 chr12:56619248 synonymous SNV . 0 24 hm5C_associated_SNPs_125104 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:56619220-56619260
64251 chr1 1421531 1421531 1 + C A rs819976 1421527 + 1421507 1421547 41 GGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGA GGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGA < 41bp 0.278593704958407 0.709088338494219 0.07998869 0.22684208 prediction 0.418176676988438 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1421527 chr1:1421531 synonymous SNV . 0 25 hm5C_associated_SNPs_125107 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:1421518-1421546
64251 chr3 112710162 112710162 1 + C T BLCA 112710161 + 112710141 112710181 41 GCCGTCCGTATCGACCACGCCCCGGACCTTCCGCGGCCAGA GCCGTCCGTATCGACCACGCCTCGGACCTTCCGCGGCCAGA < 41bp 0.595993626840751 0.805076686547108 0.2210738 0.36868495 prediction 0.418166119412713 Functional Gain - GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112710161 chr3:112710162 nonsynonymous SNV 0.934 3 22 hm5C_associated_SNPs_125109 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:112710149-112710175
64251 chr7 143078697 143078697 1 + C G LUSC 143078696 + 143078676 143078716 41 CCGCCCGTCTCCCGCGATCTCCGTTTCGGTCTCGGCTCCGG CCGCCCGTCTCCCGCGATCTCGGTTTCGGTCTCGGCTCCGG < 41bp 0.389234423223764 0.70908192951492 0.13287848 0.3134036 prediction 0.41816385902984 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143078696 chr7:143078697 synonymous SNV . 0 22 hm5C_associated_SNPs_125110 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819216 chr7:143078680-143078700
64251 chr3 178921549 178921549 1 + T G CESC 178921547 + 178921527 178921567 41 AAAATTCTTTGTGCAACCTACGTGAATGTAAATATTCGAGA AAAATTCTTTGTGCAACCTACGGGAATGTAAATATTCGAGA < 41bp 0.378494464237492 0.709081549298401 0.0639132 0.23449278 prediction 0.418163098596802 Functional Gain - PIK3CA ENSG00000121879 CDS Human protein_coding chr3:178921547 chr3:178921549 nonsynonymous SNV 0.989 4 23 hm5C_associated_SNPs_125111 8 0 1 PUM2 POSTAR2 ENCODE chr3:178921546-178921578
64251 chr1 151259093 151259093 1 + C G UCEC 151259089 + 151259069 151259109 41 GCTCAGCAGGAGACGGGGCCCAGGCTGCTGGGGTAACTAAA GCTCAGCAGGAGACGGGGCCCAGGGTGCTGGGGTAACTAAA < 41bp 0.672351533236461 0.881427837674606 0.40091082 0.8685737 prediction 0.418152608876289 Functional Gain - ZNF687 ENSG00000143373 CDS Human protein_coding chr1:151259089 chr1:151259093 nonsynonymous SNV 0.018 0 25 hm5C_associated_SNPs_125116 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:151259080-151259110
64251 chr6 37138635 37138635 1 + C T BLCA 37138634 + 37138614 37138654 41 GGCTCGGTCTACTCAGGCATCCGCGTCTCCGACAACTTGCC GGCTCGGTCTACTCAGGCATCTGCGTCTCCGACAACTTGCC < 41bp 0.57291305520802 0.781972173185374 0.79041016 0.64505 prediction 0.418118235954708 Functional Gain - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37138634 chr6:37138635 nonsynonymous SNV 0.977 4 22 hm5C_associated_SNPs_125122 0 0 2 RPS3 POSTAR2 ENCODE chr6:37138631-37138649
64251 chr19 13873568 13873568 1 + C A STAD 13873567 + 13873547 13873587 41 TCCCCCATCACCGTCGGGGACCTGGGCATCGTGCGGCGGAG TCCCCCATCACCGTCGGGGACATGGGCATCGTGCGGCGGAG < 41bp 0.44403102830896 0.709057911201079 0.80256504 0.8899149 prediction 0.418115822402159 Functional Gain - CCDC130 ENSG00000104957 CDS Human protein_coding chr19:13873567 chr19:13873568 nonsynonymous SNV 0.900 3 22 hm5C_associated_SNPs_125123 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:13873567-13873568
64251 chr19 58198842 58198842 1 + T G STAD 58198840 + 58198820 58198860 41 TGCTGTGAGTGTGGGAAATCCTTTAGACAAATCTTCAATCT TGCTGTGAGTGTGGGAAATCCTGTAGACAAATCTTCAATCT < 41bp 0.373414695411826 0.709057120525743 0.09887406 0.14043665 prediction 0.418114241051486 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58198840 chr19:58198842 nonsynonymous SNV 0.458 2 23 hm5C_associated_SNPs_125124 0 0 5 CPSF4 POSTAR2 GSE37401,GSM917666 chr19:58198819-58198855
64251 chr19 50361358 50361358 1 + C T UCEC 50361357 + 50361337 50361377 41 AGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGGTGAGG AGCTGTACATGCAGCTCATCCTGCAGCAGCTGCTGGTGAGG < 41bp 0.628110371195214 0.837166380262571 0.43303365 0.46986103 prediction 0.418112018134715 Functional Gain - PTOV1 ENSG00000104960 CDS Human protein_coding chr19:50361357 chr19:50361358 nonsynonymous SNV 0.973 4 22 hm5C_associated_SNPs_125126 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:50361314-50361368
64251 chr4 1206043 1206043 1 - G A ESCA 1206044 - 1206024 1206064 41 CGAGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGCCCG CGAGGCGGATAGAGACCACGCTAGTGACCAGTTGTAGCCCG < 41bp 0.526314124471043 0.735369277253438 0.25499666 0.18304348 prediction 0.41811030556479 Functional Gain - CTBP1 ENSG00000159692 CDS Human protein_coding chr4:1206044 chr4:1206043 synonymous SNV . 0 22 hm5C_associated_SNPs_125127 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr4:1205993-1206050
64251 chr17 1940192 1940192 1 + C G rs373361726 1940191 + 1940171 1940211 41 CCACAGTGCAAGCCCCTGTCCCCTGGAGAGATCCTGGGCTG CCACAGTGCAAGCCCCTGTCCGCTGGAGAGATCCTGGGCTG < 41bp 0.398601013807472 0.709054560577628 0.39414406 0.40395305 prediction 0.418109121155255 Functional Gain - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1940191 chr17:1940192 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_125130 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:1940138-1940200
64251 chr12 98987485 98987485 1 + C G rs542602103 98987484 + 98987464 98987504 41 CTCTGTGAGCCGCAACCTTTCCAAGGGAGTGGTTGTGTGAT CTCTGTGAGCCGCAACCTTTCGAAGGGAGTGGTTGTGTGAT < 41bp 0.40182095657174 0.709047442356892 0.9031403 0.9254075 prediction 0.418094884713785 Functional Gain - SLC25A3 ENSG00000075415 UTR5 Human protein_coding chr12:98987484 chr12:98987485 . . 0 22 hm5C_associated_SNPs_125132 1 0 26 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:98987460-98987500
64251 chr10 102672917 102672917 1 + C A UCEC 102672913 + 102672893 102672933 41 GGCCAGGTTTCCCCTCATCCCCAGCCCCGGGGTCGTCGCCC GGCCAGGTTTCCCCTCATCCCCAGACCCGGGGTCGTCGCCC < 41bp 0.315189418327356 0.709046872480999 0.07304779 0.30605304 prediction 0.418093744961997 Functional Gain - SLF2 ENSG00000119906 CDS Human protein_coding chr10:102672913 chr10:102672917 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_125134 0 0 1 UCHL5 POSTAR2 ENCODE chr10:102672772-102673010
64251 chr1 156698348 156698348 1 + C G rs376821452 156698347 + 156698327 156698367 41 CACACCCGCACCGCCCCGACCCCAGGTAGTGAGGCCAGTGA CACACCCGCACCGCCCCGACCGCAGGTAGTGAGGCCAGTGA < 41bp 0.401502562271436 0.709045181837596 0.04853365 0.18302241 prediction 0.418090363675192 Functional Gain - RRNAD1 ENSG00000143303;ENSG00000143319 UTR5 Human other chr1:156698347 chr1:156698348 . . 0 22 hm5C_associated_SNPs_125135 0 0 1 DDX3X POSTAR2 ENCODE chr1:156698296-156698348
64251 chr19 49377319 49377319 1 + A G rs610308 49377316 + 49377296 49377336 41 AGGAGAAGGAGGAAAAGGCACACAAAGAAACTGGGAAAGGA AGGAGAAGGAGGAAAAGGCACACGAAGAAACTGGGAAAGGA < 41bp 0.605766992700799 0.814802545370482 0.066862494 0.08049822 prediction 0.418071105339366 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49377316 chr19:49377319 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_125139 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:49377318-49377319
64251 chr6 80746315 80746315 1 + A G LIHC 80746312 + 80746292 80746332 41 AACAAGTGTTGTTAAAGATTCTCAGGTAAGACTTAATGTTG AACAAGTGTTGTTAAAGATTCTCGGGTAAGACTTAATGTTG < 41bp 0.481170718049707 0.70903339155178 0.14494053 0.39945942 prediction 0.418066783103559 Functional Gain - TTK ENSG00000112742 CDS Human protein_coding chr6:80746312 chr6:80746315 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125141 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr6:80746305-80746325
64251 chr1 161132826 161132826 1 + C A STAD 161132822 + 161132802 161132842 41 CAATGGTCCAGTTCCCTCTCCACCCCGCCGAGGAGGGGCTC CAATGGTCCAGTTCCCTCTCCACCACGCCGAGGAGGGGCTC < 41bp 0.27379205278602 0.709027955227298 0.19302446 0.10915652 prediction 0.418055910454596 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161132822 chr1:161132826 synonymous SNV . 0 25 hm5C_associated_SNPs_125142 0 0 2 GRWD1 POSTAR2 ENCODE chr1:161132786-161132847
64251 chr11 1972172 1972172 1 + C T UCEC 1972171 + 1972151 1972191 41 GGCCCACAACTTCGGGTGTTCCGAACCAACTTCTTCATTCA GGCCCACAACTTCGGGTGTTCTGAACCAACTTCTTCATTCA < 41bp 0.607299166504425 0.816326690197395 0.25945595 0.39770842 prediction 0.418055047385941 Functional Gain - MRPL23 ENSG00000214026 CDS Human protein_coding chr11:1972171 chr11:1972172 stopgain 0.925 0 22 hm5C_associated_SNPs_125143 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:1972138-1972178
64251 chr5 131706054 131706054 1 + C T LUSC 131706053 + 131706033 131706073 41 CTACCTGTCCACCATTGTGACCGAGGTGGGTGCCGGCCCCT CTACCTGTCCACCATTGTGACTGAGGTGGGTGCCGGCCCCT < 41bp 0.552749111394229 0.761774445298618 0.36953712 0.36931255 prediction 0.418050667808779 Functional Gain - SLC22A5 ENSG00000197375 CDS Human protein_coding chr5:131706053 chr5:131706054 synonymous SNV . 0 22 hm5C_associated_SNPs_125145 0 0 4 PRPF8 POSTAR2 ENCODE chr5:131706051-131706102
64251 chr14 45605531 45605531 1 + C T LGG 45605530 + 45605510 45605550 41 GGACTACCAGCTGCACATTTCCCGGGCTGCTCTGTTTTGCA GGACTACCAGCTGCACATTTCTCGGGCTGCTCTGTTTTGCA < 41bp 0.470900666483505 0.709014612525922 0.5195452 0.30790886 prediction 0.418029225051844 Functional Gain - FANCM ENSG00000187790 CDS Human protein_coding chr14:45605530 chr14:45605531 synonymous SNV . 0 22 hm5C_associated_SNPs_125151 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:45605520-45605540
64251 chr16 72094673 72094673 1 + T A UCEC 72094671 + 72094651 72094691 41 TCACGACCTGGAGGAGGACACCTGGTATGCGACTGGGATCT TCACGACCTGGAGGAGGACACCAGGTATGCGACTGGGATCT < 41bp 0.519526448940311 0.728527257004905 0.6070136 0.90142 prediction 0.418001616129186 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094671 chr16:72094673 nonsynonymous SNV 0.098 4 23 hm5C_associated_SNPs_125157 0 0 5 LARP4 POSTAR2 ENCODE chr16:72094623-72094689
64251 chr19 57803421 57803421 1 + C A rs143031251 57803417 + 57803397 57803437 41 GATTCACACTGCAGAGAAGTCCCACGAACCCATCCAGAGTG GATTCACACTGCAGAGAAGTCCCAAGAACCCATCCAGAGTG < 41bp 0.302678541522626 0.708997695301381 0.05242759 0.12251338 prediction 0.417995390602763 Functional Gain - ZNF460 ENSG00000197714 CDS Human protein_coding chr19:57803417 chr19:57803421 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_125158 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:57803385-57803428
64251 chr1 146650972 146650972 1 + T C rs587707048 146650970 + 146650950 146650990 41 GGCGAGAAGCTCAGCAAAGACCTGAATATCGTCATAGCCAA GGCGAGAAGCTCAGCAAAGACCCGAATATCGTCATAGCCAA < 41bp 0.636569355215968 0.845560146886683 0.121869296 0.104037255 prediction 0.417981583341431 Functional Gain - PDIA3P1 ENSG00000180867 ncRNA_exonic Human processed_pseudogene chr1:146650970 chr1:146650972 . . 0 23 hm5C_associated_SNPs_125161 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704218 chr1:146650961-146650982
64251 chr6 24418414 24418414 1 + T C LUAD 24418412 + 24418392 24418432 41 TCTCCAATGCAGCTCGTGAGCTTAGGGTGCTGATTGATGAT TCTCCAATGCAGCTCGTGAGCTCAGGGTGCTGATTGATGAT < 41bp 0.415839427228886 0.708989814274662 0.055397272 0.0680739 prediction 0.417979628549323 Functional Gain - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24418412 chr6:24418414 synonymous SNV . 0 23 hm5C_associated_SNPs_125163 0 0 10 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:24418403-24418423
64251 chr16 84793821 84793821 1 + C A COAD 84793817 + 84793797 84793837 41 GAGGGATATTCGCCCTGGAGCTGCCTTTGAGCCCACATATA GAGGGATATTCGCCCTGGAGCTGCATTTGAGCCCACATATA < 41bp 0.275567207428293 0.708986243679624 0.09397906 0.09486443 prediction 0.417972487359247 Functional Gain - USP10 ENSG00000103194 CDS Human protein_coding chr16:84793817 chr16:84793821 synonymous SNV . 0 25 hm5C_associated_SNPs_125164 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012389 chr16:84793797-84793855
64251 chr12 85694984 85694984 1 + T C BLCA 85694982 + 85694962 85695002 41 AAGTGGTGGTTCTGTGGTTACTTCATGCATGTTACCACGTG AAGTGGTGGTTCTGTGGTTACTCCATGCATGTTACCACGTG < 41bp 0.669694611358374 0.878679972239927 0.5468467 0.9747851 prediction 0.417970721763105 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85694982 chr12:85694984 nonsynonymous SNV 0.996 2 23 hm5C_associated_SNPs_125165 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:85694960-85694988
64251 chr11 61495718 61495718 1 + C T SKCM 61495717 + 61495697 61495737 41 ATTGCTGGCCTGGTGCTGCTCCGGCAGCGGCAGCGGGCCAA ATTGCTGGCCTGGTGCTGCTCTGGCAGCGGCAGCGGGCCAA < 41bp 0.60189779160829 0.810878914887698 0.352987 0.21822971 prediction 0.417962246558816 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61495717 chr11:61495718 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_125167 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr11:61495700-61495719
64251 chr19 44681738 44681738 1 + A G BLCA 44681735 + 44681715 44681755 41 GATCAAATCTTACAGTTCATCACAGAATCCATGTTGGTGAT GATCAAATCTTACAGTTCATCACGGAATCCATGTTGGTGAT < 41bp 0.558713489058072 0.767694440302337 0.2405473 0.39822108 prediction 0.417961902488531 Functional Gain - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681735 chr19:44681738 nonsynonymous SNV 0.887 1 24 hm5C_associated_SNPs_125169 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:44681688-44681758
64251 chr9 131038585 131038585 1 + C T LIHC 131038584 + 131038564 131038604 41 TCCGGGTCAGAGTTCCTGGCCCGGTGCACCTGAGAGGTCGC TCCGGGTCAGAGTTCCTGGCCTGGTGCACCTGAGAGGTCGC < 41bp 0.497745066375091 0.708971924243104 0.44625914 0.37846696 prediction 0.417943848486208 Functional Gain - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131038584 chr9:131038585 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_125174 0 0 2 DDX3X POSTAR2 ENCODE chr9:131038569-131038683
64251 chr22 20043483 20043483 1 + T C COAD 20043481 + 20043461 20043501 41 TGCAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAA TGCAGCACAGCAAAGGGAGACGCCATTTGCTACTATGGGAA < 41bp 0.514721867709448 0.723685484142706 0.10198778 0.20335796 prediction 0.417927232866515 Functional Gain - TANGO2 ENSG00000183597 CDS Human protein_coding chr22:20043481 chr22:20043483 nonsynonymous SNV 0.975 0 23 hm5C_associated_SNPs_125177 0 0 2 DDX24 POSTAR2 ENCODE chr22:20043468-20043518
64251 chr1 235602123 235602123 1 + C A CHOL 235602122 + 235602102 235602142 41 CGGAGAGCTGAGCTTGACTACCGAAAAGCTTTTGGAAATGA CGGAGAGCTGAGCTTGACTACAGAAAAGCTTTTGGAAATGA < 41bp 0.446335489686144 0.708960985712766 0.11226463 0.2235196 prediction 0.417921971425533 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235602122 chr1:235602123 synonymous SNV . 0 22 hm5C_associated_SNPs_125179 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:235602081-235602124
64251 chr17 40714665 40714665 1 + C A rs117419466 40714664 + 40714644 40714684 41 GCCGTATTCCGGTCGGGTCTCCTGGTGCTGACGACGCCGCT GCCGTATTCCGGTCGGGTCTCATGGTGCTGACGACGCCGCT < 41bp 0.622332573449254 0.831293318290909 0.82566977 0.73795265 prediction 0.417921489683312 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40714664 chr17:40714665 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_125180 0 0 12 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:40714640-40714680
64251 chr12 48361005 48361005 1 + T C COAD 48361002 + 48360982 48361022 41 GTTTGGTAGCTTCTTCTGCACGGTACCTGAGATCCTGGTGC GTTTGGTAGCTTCTTCTGCACGGCACCTGAGATCCTGGTGC < 41bp 0.552217310704072 0.761159712720353 0.20537561 0.24699509 prediction 0.417884804032563 Functional Gain - TMEM106C ENSG00000134291 CDS Human protein_coding chr12:48361002 chr12:48361005 nonsynonymous SNV 0.431 0 24 hm5C_associated_SNPs_125187 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr12:48360976-48361008
64251 chr22 50987862 50987862 1 + C T SKCM 50987861 + 50987841 50987881 41 TACAGCATGGAGTGCTACGACCCGCGAACAGACGCCTGGAC TACAGCATGGAGTGCTACGACTCGCGAACAGACGCCTGGAC < 41bp 0.461041392443594 0.708936034063583 0.061437577 0.06785661 prediction 0.417872068127167 Functional Gain - KLHDC7B ENSG00000130487 CDS Human protein_coding chr22:50987861 chr22:50987862 nonsynonymous SNV 0.881 3 22 hm5C_associated_SNPs_125190 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:50987854-50987914
64251 chr6 54805606 54805606 1 + A G STAD 54805603 + 54805583 54805623 41 AGTCAGAGGCACCAAAAATGCACACCTTGCAGGTTCCTGAA AGTCAGAGGCACCAAAAATGCACGCCTTGCAGGTTCCTGAA < 41bp 0.480747220160104 0.708933864235816 0.059230745 0.13119975 prediction 0.417867728471633 Functional Gain - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54805603 chr6:54805606 nonsynonymous SNV 0.828 1 24 hm5C_associated_SNPs_125193 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:54805595-54805623
64251 chr9 133507608 133507608 1 + A G CESC 133507605 + 133507585 133507625 41 ACAGTGGTCCTCCGGCCTTTCTGACCCAGGGCTGGGGCAGC ACAGTGGTCCTCCGGCCTTTCTGGCCCAGGGCTGGGGCAGC < 41bp 0.456489452361016 0.708932971862324 0.11252493 0.21868867 prediction 0.417865943724648 Functional Gain - FUBP3 ENSG00000107164 CDS Human protein_coding chr9:133507605 chr9:133507608 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_125194 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917669 chr9:133507589-133507619
64251 chr8 125551364 125551364 1 + A G rs34681068 125551361 + 125551341 125551381 41 CGCCCTTCCGGCTGGCCCCGCTCAGTCACCCGCAGCAGGCG CGCCCTTCCGGCTGGCCCCGCTCGGTCACCCGCAGCAGGCG < 41bp 0.6033292167433 0.812257302666074 0.118753225 0.10816935 prediction 0.417856171845548 Functional Gain - NDUFB9 ENSG00000147684;ENSG00000147687 UTR5 Human other chr8:125551361 chr8:125551364 . . 0 24 hm5C_associated_SNPs_125198 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr8:125551360-125551440
64251 chr16 28883185 28883185 1 + T C rs200463987 28883182 + 28883162 28883202 41 TGCCGCCTCCCATTTTGACTCGATGGAACTGCTTCCCCCAG TGCCGCCTCCCATTTTGACTCGACGGAACTGCTTCCCCCAG < 41bp 0.513632504318052 0.722559874286871 0.4067155 0.78407764 prediction 0.41785473993764 Functional Gain - SH2B1 ENSG00000178188 CDS Human protein_coding chr16:28883182 chr16:28883185 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_125200 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr16:28883123-28883192
64251 chr9 127076240 127076240 1 + T C rs150614386 127076237 + 127076217 127076257 41 GACGCCAAGGCGAGGCAGGACTGTGTCAAGGAGATCGGCCT GACGCCAAGGCGAGGCAGGACTGCGTCAAGGAGATCGGCCT < 41bp 0.482020299154191 0.7089234576486 0.16089678 0.30396152 prediction 0.4178469152972 Functional Gain - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127076237 chr9:127076240 synonymous SNV . 0 24 hm5C_associated_SNPs_125202 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:127076232-127076261
64251 chr11 121421301 121421301 1 + A G LGG 121421298 + 121421278 121421318 41 TGGGGTGGGGTGACAGCTACCGGAAGATTTCTGGGGACACT TGGGGTGGGGTGACAGCTACCGGGAGATTTCTGGGGACACT < 41bp 0.573475108963359 0.78239742403075 0.89819056 0.92813396 prediction 0.417844630134783 Functional Gain - SORL1 ENSG00000137642 CDS Human protein_coding chr11:121421298 chr11:121421301 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_125203 0 0 7 FUS POSTAR2 GSE40653,GSM998875 chr11:121421300-121421320
64251 chr19 58352682 58352682 1 + T C UCEC 58352679 + 58352659 58352699 41 CCTTTCAGTGTGGGGGAGCTCACTATAGCCATGGAGATTCC CCTTTCAGTGTGGGGGAGCTCACCATAGCCATGGAGATTCC < 41bp 0.566720239320684 0.775627377611009 0.19979328 0.44375527 prediction 0.417814276580651 Functional Gain - ZNF587B ENSG00000269343 CDS Human protein_coding chr19:58352679 chr19:58352682 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_125209 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:58352667-58352688
64251 chr12 64854074 64854074 1 + A G UCEC 64854071 + 64854051 64854091 41 AAGTGTTGAAAAAACTCAATCACAAAAATATTGTCAAATTA AAGTGTTGAAAAAACTCAATCACGAAAATATTGTCAAATTA < 41bp 0.528149241875915 0.737041862550037 0.062242 0.055087447 prediction 0.417785241348244 Functional Gain - TBK1 ENSG00000183735 CDS Human protein_coding chr12:64854071 chr12:64854074 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_125217 0 0 4 FUS POSTAR2 SRX029329 chr12:64854058-64854082
64251 chr11 69465892 69465892 1 + C A UCEC 69465888 + 69465868 69465908 41 CCACCCTCTCTCTCTCAGGACTGCCTCCGGGCCTGCCAGGA CCACCCTCTCTCTCTCAGGACTGCATCCGGGCCTGCCAGGA < 41bp 0.284981280206132 0.708891457144092 0.17051885 0.21162802 prediction 0.417782914288185 Functional Gain - CCND1 ENSG00000110092 CDS Human protein_coding chr11:69465888 chr11:69465892 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_125218 0 0 1 RPS3 POSTAR2 ENCODE chr11:69465881-69465931
64251 chr1 153618152 153618152 1 + C A rs12091549 153618151 + 153618131 153618171 41 ACAGAAACATCCCAGAAAAACCGGTCAGTGTTCCTTCCTCC ACAGAAACATCCCAGAAAAACAGGTCAGTGTTCCTTCCTCC < 41bp 0.630663227943873 0.839552568275977 0.26403737 0.64590394 prediction 0.417778680664207 Functional Gain - CHTOP ENSG00000160679 UTR3 Human protein_coding chr1:153618151 chr1:153618152 . . 0 22 hm5C_associated_SNPs_125220 0 0 5 U2AF2 POSTAR2 GSE61603,GSM1509288 chr1:153618140-153618160
64251 chr19 544108 544108 1 + C T rs61729587 544107 + 544087 544127 41 TCTTCACTGCTGGTGCTGGCCCTGGGGGCCCTGTCAGTAGG TCTTCACTGCTGGTGCTGGCCTTGGGGGCCCTGTCAGTAGG < 41bp 0.525913062170729 0.734800050566426 0.17741773 0.08973554 prediction 0.417773976791394 Functional Gain - GZMM ENSG00000197540 CDS Human protein_coding chr19:544107 chr19:544108 synonymous SNV . 0 22 hm5C_associated_SNPs_125221 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:544071-544109
64251 chr19 36258737 36258737 1 + C T UCEC 36258736 + 36258716 36258756 41 GAAAGCCAAGGCCTTGCCGCCCGCAGCGGGGTCAGTGATAC GAAAGCCAAGGCCTTGCCGCCTGCAGCGGGGTCAGTGATAC < 41bp 0.621911846846745 0.830793622339223 0.011801183 0.024208099 prediction 0.417763550984957 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36258736 chr19:36258737 synonymous SNV . 0 22 hm5C_associated_SNPs_125224 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:36258720-36258760
64251 chr16 27374064 27374064 1 + C A COAD 27374060 + 27374040 27374080 41 CACCTCCCTGGGGCAAGGAGCAGCCTCTCCACCTGGAGCCA CACCTCCCTGGGGCAAGGAGCAGCATCTCCACCTGGAGCCA < 41bp 0.298146836845475 0.708873667937606 0.20011637 0.2133804 prediction 0.417747335875212 Functional Gain - IL4R ENSG00000077238 CDS Human protein_coding chr16:27374060 chr16:27374064 nonsynonymous SNV 0.062 2 25 hm5C_associated_SNPs_125227 0 0 2 BUD13 POSTAR2 ENCODE chr16:27374060-27374076
64251 chr16 23701327 23701327 1 + T C COAD 23701324 + 23701304 23701344 41 AGCCGGCTCCGCTACGCCCGCACTATGGTGGACAAGCTGCT AGCCGGCTCCGCTACGCCCGCACCATGGTGGACAAGCTGCT < 41bp 0.530646421876741 0.739513108622932 0.20684165 0.22931767 prediction 0.41773337349238 Functional Gain - PLK1 ENSG00000166851 CDS Human protein_coding chr16:23701324 chr16:23701327 synonymous SNV . 0 24 hm5C_associated_SNPs_125232 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819214 chr16:23701320-23701340
64251 chr9 90341136 90341136 1 + A G rs41306241 90341133 + 90341113 90341153 41 CGGCCAGGCCCAGCTGTGGCCGGACAGGGACTGGAAGAGAG CGGCCAGGCCCAGCTGTGGCCGGGCAGGGACTGGAAGAGAG < 41bp 0.505344547846865 0.714205805238709 0.36988205 0.52076924 prediction 0.41772251478369 Functional Gain - CTSL ENSG00000135047 UTR5 Human protein_coding chr9:90341133 chr9:90341136 . . 0 24 hm5C_associated_SNPs_125236 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:90341120-90341140
64251 chr13 114277524 114277524 1 + T A COAD 114277520 + 114277500 114277540 41 GTGTCCCTCGTGGCCGTTCACCCCTCCACCGTCAACCCGCT GTGTCCCTCGTGGCCGTTCACCCCACCACCGTCAACCCGCT < 41bp 0.445636593032721 0.708843372909459 0.262097 0.3647483 prediction 0.417686745818919 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114277520 chr13:114277524 nonsynonymous SNV 0.053 1 25 hm5C_associated_SNPs_125244 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:114277518-114277552
64251 chr10 16528398 16528398 1 + C G OV 16528397 + 16528377 16528417 41 TCTCCATGGAGCTGATGGAACCAGTATCAAGTGTGGCATTA TCTCCATGGAGCTGATGGAACGAGTATCAAGTGTGGCATTA < 41bp 0.393650474205681 0.708836245052179 0.108288854 0.26036608 prediction 0.417672490104357 Functional Gain - PTER ENSG00000165983 CDS Human protein_coding chr10:16528397 chr10:16528398 synonymous SNV . 0 22 hm5C_associated_SNPs_125247 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:16528376-16528414
64251 chr20 33297290 33297290 1 + C G CESC 33297286 + 33297266 33297306 41 AGAGCCCGGGTCCCCTTCCCCGCTCCCGGACGCGGCCCTGC AGAGCCCGGGTCCCCTTCCCCGCTGCCGGACGCGGCCCTGC < 41bp 0.415950366952073 0.70883195927982 0.41446024 0.43297046 prediction 0.417663918559641 Functional Gain - TP53INP2 ENSG00000078804 CDS Human protein_coding chr20:33297286 chr20:33297290 synonymous SNV . 0 25 hm5C_associated_SNPs_125251 0 0 1 RPS3 POSTAR2 ENCODE chr20:33297268-33297329
64251 chr11 122774861 122774861 1 + T C UCEC 122774859 + 122774839 122774879 41 CACAGAGTGCAGCTTCTTTACTTGGTAGTGAATTTTTAAGC CACAGAGTGCAGCTTCTTTACTCGGTAGTGAATTTTTAAGC < 41bp 0.653728741394392 0.86254757301605 0.03641519 0.054426372 prediction 0.417637663243317 Functional Gain - C11orf63 ENSG00000109944 CDS Human protein_coding chr11:122774859 chr11:122774861 synonymous SNV . 0 23 hm5C_associated_SNPs_125255 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr11:122774841-122774868
64251 chr3 122420202 122420202 1 + T G BLCA 122420200 + 122420180 122420220 41 GGCTTTCCCTTAGGCCGATGCGTGGAGACCATTGTTTCTGC GGCTTTCCCTTAGGCCGATGCGGGGAGACCATTGTTTCTGC < 41bp 0.360656602310986 0.708817426832866 0.51873004 0.9242637 prediction 0.417634853665733 Functional Gain - PARP14 ENSG00000173193 CDS Human protein_coding chr3:122420200 chr3:122420202 nonsynonymous SNV 0.002 3 23 hm5C_associated_SNPs_125257 0 0 1 FXR2 POSTAR2 ENCODE chr3:122420185-122420228
64251 chr12 54403113 54403113 1 + C T STAD 54403112 + 54403092 54403132 41 CCTGTTCTCCAAATACAAAGCCGGCGAGTCCCTGGAACCGG CCTGTTCTCCAAATACAAAGCTGGCGAGTCCCTGGAACCGG < 41bp 0.555359020487778 0.764165490370194 0.047184676 0.0069435537 prediction 0.417612939764831 Functional Gain - HOXC8 ENSG00000037965 CDS Human protein_coding chr12:54403112 chr12:54403113 synonymous SNV . 0 22 hm5C_associated_SNPs_125266 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:54403095-54403141
64251 chr5 52779474 52779474 1 + C T UCEC 52779473 + 52779453 52779493 41 GGGCTGGATGGGAAAACCTACCGCAATGAATGTGCACTCCT GGGCTGGATGGGAAAACCTACTGCAATGAATGTGCACTCCT < 41bp 0.624095112386291 0.832900879374199 0.24858728 0.13485268 prediction 0.417611533975817 Functional Gain - FST ENSG00000134363 CDS Human protein_coding chr5:52779473 chr5:52779474 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_125268 0 0 2 GRWD1 POSTAR2 ENCODE chr5:52779411-52779484
64251 chr2 15732011 15732011 1 + C A rs199677503 15732007 + 15731987 15732027 41 CCGCCACTGCCACGCCGTGTCAGTCGGGAGGGAGGGAGCGA CCGCCACTGCCACGCCGTGTCAGTAGGGAGGGAGGGAGCGA < 41bp 0.64740328213628 0.856206068999184 0.08969742 0.22727817 prediction 0.417605573725809 Functional Gain - DDX1 ENSG00000079785 UTR5 Human protein_coding chr2:15732007 chr2:15732011 . . 0 25 hm5C_associated_SNPs_125269 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:15732000-15732020
64251 chr2 173292662 173292662 1 + C G LUSC 173292658 + 173292638 173292678 41 GGAGCCTCTTCGGCTTCTCGCTGGCCATGCACTGGCAACTG GGAGCCTCTTCGGCTTCTCGCTGGGCATGCACTGGCAACTG < 41bp 0.66331332850072 0.87211373722922 0.2802673 0.8686233 prediction 0.417600817457001 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173292658 chr2:173292662 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_125270 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:173292659-173292687
64251 chr1 22915663 22915663 1 + C T CHOL 22915662 + 22915642 22915682 41 GACCTGAGCCCCGAGCCCCGCCGGGCCGCTGTGGTCAACAT GACCTGAGCCCCGAGCCCCGCTGGGCCGCTGTGGTCAACAT < 41bp 0.458636369525816 0.70879718477951 0.11885756 0.14022124 prediction 0.417594369559021 Functional Gain - EPHA8 ENSG00000070886 CDS Human protein_coding chr1:22915662 chr1:22915663 nonsynonymous SNV 0.405 2 22 hm5C_associated_SNPs_125273 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:22915645-22915678
64251 chr21 45732983 45732983 1 + C T PAAD 45732982 + 45732962 45733002 41 GGCACGGACTCGGCCCTCCACCGCATCATGGAGGTCATCGA GGCACGGACTCGGCCCTCCACTGCATCATGGAGGTCATCGA < 41bp 0.602349853751702 0.811143183689923 0.030988365 0.040875345 prediction 0.417586659876442 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45732982 chr21:45732983 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_125275 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr21:45732955-45732984
64251 chr9 116132540 116132540 1 + C T rs186113785 116132539 + 116132519 116132559 41 AAGAGAAACAGGGCCCATAACCAGTGGGCAGCTTTAGGAGG AAGAGAAACAGGGCCCATAACTAGTGGGCAGCTTTAGGAGG < 41bp 0.535410758330692 0.74419641581289 0.22237441 0.19032046 prediction 0.417571314964395 Functional Gain - BSPRY ENSG00000119411 UTR3 Human protein_coding chr9:116132539 chr9:116132540 . . 0 22 hm5C_associated_SNPs_125280 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr9:116132540-116132566
64251 chr1 1464610 1464610 1 + A G UCEC 1464607 + 1464587 1464627 41 GGAACTCCTTCCCCAGGCGCCTGAAGCTGGCCCAGTTTGAC GGAACTCCTTCCCCAGGCGCCTGGAGCTGGCCCAGTTTGAC < 41bp 0.595787440786301 0.804571603514256 0.7029329 0.77724326 prediction 0.417568325455909 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1464607 chr1:1464610 nonsynonymous SNV 0.940 2 24 hm5C_associated_SNPs_125283 0 0 1 SF3B4 POSTAR2 ENCODE chr1:1464549-1464612
64251 chr4 728734 728734 1 + C A UCEC 728730 + 728710 728750 41 TTGATGACAGTCTGCAGGAGCTGCCTGGTGAAGTACCTGGA TTGATGACAGTCTGCAGGAGCTGCATGGTGAAGTACCTGGA < 41bp 0.299727902161833 0.70877894733287 0.1319341 0.11957893 prediction 0.41755789466574 Functional Gain - PCGF3 ENSG00000185619 CDS Human protein_coding chr4:728730 chr4:728734 nonsynonymous SNV 0.994 4 25 hm5C_associated_SNPs_125284 0 0 14 BUD13 POSTAR2 ENCODE chr4:728685-728770
64251 chr19 44469989 44469989 1 + C T BLCA 44469988 + 44469968 44470008 41 AAATTGAGATGGAGACTGTTCCAGAAGCAGGACCACATGAA AAATTGAGATGGAGACTGTTCTAGAAGCAGGACCACATGAA < 41bp 0.566166298880287 0.774944152686883 0.5318551 0.41273794 prediction 0.417555707613191 Functional Gain - ZNF221 ENSG00000159905 CDS Human protein_coding chr19:44469988 chr19:44469989 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_125285 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:44469971-44470001
64251 chr22 21799333 21799333 1 + T C UCEC 21799331 + 21799311 21799351 41 GGCTTCCTGTGTGACGTCATCATCATGGTGGAGAACTCCAT GGCTTCCTGTGTGACGTCATCACCATGGTGGAGAACTCCAT < 41bp 0.425497422325439 0.708777684519112 0.12279132 0.1050916 prediction 0.417555369038224 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21799331 chr22:21799333 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_125286 0 0 7 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr22:21799304-21799337
64251 chr7 92077139 92077139 1 + T C rs532003876 92077137 + 92077117 92077157 41 AGGGGGAGATCCTCTGCCATCATTGCACTGGCCGGGGCGGC AGGGGGAGATCCTCTGCCATCACTGCACTGGCCGGGGCGGC < 41bp 0.566495149369736 0.775271574610629 0.21568689 0.2594373 prediction 0.417552850481786 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92077137 chr7:92077139 synonymous SNV . 0 23 hm5C_associated_SNPs_125287 0 0 5 GEMIN5 POSTAR2 ENCODE chr7:92077085-92077234
64251 chr22 50962114 50962114 1 - G A UCEC 50962115 - 50962095 50962135 41 CTCTTCACGGATTACTACGGCCGGAGCAGATCGGCTGAGCA CTCTTCACGGATTACTACGGCTGGAGCAGATCGGCTGAGCA < 41bp 0.587691339509942 0.79646216822935 0.3415296 0.2600087 prediction 0.417541657438817 Functional Gain - SCO2 ENSG00000130489 CDS Human protein_coding chr22:50962115 chr22:50962114 nonsynonymous SNV 0.081 5 22 hm5C_associated_SNPs_125289 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:50962100-50962140
64251 chr17 1944903 1944903 1 + C G UCEC 1944902 + 1944882 1944922 41 TCCCCACGCCCCGGGCCGGCCCGCGCGGGGGAAGGTAGGCG TCCCCACGCCCCGGGCCGGCCGGCGCGGGGGAAGGTAGGCG < 41bp 0.61045881225267 0.819216849107992 0.37618697 0.74977094 prediction 0.417516073710644 Functional Gain - DPH1 ENSG00000108963 CDS Human protein_coding chr17:1944902 chr17:1944903 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_125297 0 0 2 PPIG POSTAR2 ENCODE chr17:1944815-1944905
64251 chr2 122523817 122523817 1 + A G rs144246262 122523814 + 122523794 122523834 41 CACCCACGTAAGTTAATAAGCAAAATCCTGACTATTATGTT CACCCACGTAAGTTAATAAGCAAGATCCTGACTATTATGTT < 41bp 0.547188747393557 0.755945680513941 0.22832286 0.29019803 prediction 0.417513866240768 Functional Gain - TSN ENSG00000211460 UTR3 Human protein_coding chr2:122523814 chr2:122523817 . . 0 24 hm5C_associated_SNPs_125299 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:122523751-122523843
64251 chr11 74700073 74700073 1 + C A COAD 74700069 + 74700049 74700089 41 CTCCTCTGTCTCAGTCTCCCCAGCCTTGGGGCCGGTGCCTC CTCCTCTGTCTCAGTCTCCCCAGCATTGGGGCCGGTGCCTC < 41bp 0.42674804663493 0.708750159772384 0.5394774 0.54840595 prediction 0.417500319544768 Functional Gain - NEU3 ENSG00000162139 UTR5 Human protein_coding chr11:74700069 chr11:74700073 . . 0 25 hm5C_associated_SNPs_125301 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:74700072-74700073
64251 chr6 36653580 36653580 1 + C T rs139304346 36653579 + 36653559 36653599 41 CTCCAAGAGGAAGCCCTAATCCGCCCACAGGAAGCCTGCAG CTCCAAGAGGAAGCCCTAATCTGCCCACAGGAAGCCTGCAG < 41bp 0.54583376574554 0.754575956180697 0.106481165 0.054112703 prediction 0.417484380870315 Functional Gain - CDKN1A ENSG00000124762 UTR3 Human protein_coding chr6:36653579 chr6:36653580 . . 0 22 hm5C_associated_SNPs_125305 0 0 4 PTBP1 POSTAR2 GSE42701,GSM1048186 chr6:36653580-36653600
64251 chr22 37964470 37964470 1 + C T LUAD 37964469 + 37964449 37964489 41 CACGGGTCCTGCTGCAAATCCCCCAGCCCCTGCCGCAAGCT CACGGGTCCTGCTGCAAATCCTCCAGCCCCTGCCGCAAGCT < 41bp 0.441078467779764 0.708741315736515 0.14398319 0.94307053 prediction 0.41748263147303 Functional Gain - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37964469 chr22:37964470 synonymous SNV . 0 22 hm5C_associated_SNPs_125306 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37964460-37964540
64251 chr5 176882976 176882976 1 + C T BLCA 176882975 + 176882955 176882995 41 CCTCGGCCCGCGCCGCCCTGCCCAGCCCTCTGCCTGCAGGC CCTCGGCCCGCGCCGCCCTGCTCAGCCCTCTGCCTGCAGGC < 41bp 0.475046616755332 0.708739928420126 0.06934795 0.08239561 prediction 0.417479856840252 Functional Gain - PRR7 ENSG00000131188 CDS Human protein_coding chr5:176882975 chr5:176882976 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_125308 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:176882952-176882979
64251 chr3 20215809 20215809 1 - G T SARC 20215813 - 20215793 20215833 41 ATAGACCAGTCACCAGGCCTCTAGCTAAAAGAGCACTGAAA ATAGACCAGTCACCAGGCCTCTAGATAAAAGAGCACTGAAA < 41bp 0.327043318306437 0.708738130680197 0.03231594 0.03816253 prediction 0.417476261360394 Functional Gain - SGO1 ENSG00000129810 CDS Human protein_coding chr3:20215813 chr3:20215809 nonsynonymous SNV 0.891 0 25 hm5C_associated_SNPs_125310 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:20215802-20215834
64251 chr1 181058365 181058365 1 + C G PRAD 181058361 + 181058341 181058381 41 GCCGGAGCGCTCCTCCGTCTCAGACGCGCCGCGGGTAGGGG GCCGGAGCGCTCCTCCGTCTCAGAGGCGCCGCGGGTAGGGG < 41bp 0.662625807454042 0.871317201672323 0.8274078 0.904724 prediction 0.417382788436564 Functional Gain - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058361 chr1:181058365 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_125323 0 0 2 AARS POSTAR2 ENCODE chr1:181058348-181058448
64251 chr1 44685725 44685725 1 + T C rs116305257 44685723 + 44685703 44685743 41 CCTACGGAGGAGCTGGTGCACATGTTCAATGAGCTGCGAAG CCTACGGAGGAGCTGGTGCACACGTTCAATGAGCTGCGAAG < 41bp 0.623598890996047 0.832288748002029 0.2639699 0.14308923 prediction 0.417379714011964 Functional Gain - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44685723 chr1:44685725 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_125324 0 0 3 DDX24 POSTAR2 ENCODE chr1:44685688-44685759
64251 chr5 169031164 169031164 1 + T C STAD 169031161 + 169031141 169031181 41 GTAAGAAATTACACCCTATTCTATATGTGTCTTCTAAATCT GTAAGAAATTACACCCTATTCTACATGTGTCTTCTAAATCT < 41bp 0.55562837844315 0.764307256748121 0.10197681 0.3141488 prediction 0.417357756609943 Functional Gain - SPDL1 ENSG00000040275 CDS Human protein_coding chr5:169031161 chr5:169031164 nonsynonymous SNV 0.042 3 24 hm5C_associated_SNPs_125328 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr5:169031145-169031167
64251 chr17 48797012 48797012 1 + C A rs549651658 48797011 + 48796991 48797031 41 GATTTCGGCCTGAGAGCGGGCCGAGGAGATTGGCGACGGTG GATTTCGGCCTGAGAGCGGGCAGAGGAGATTGGCGACGGTG < 41bp 0.545250422525934 0.753921245202968 0.47883755 0.76441056 prediction 0.417341645354068 Functional Gain - LUC7L3 ENSG00000108848 UTR5 Human protein_coding chr17:48797011 chr17:48797012 . . 0 22 hm5C_associated_SNPs_125331 0 0 23 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:48796968-48797016
64251 chr17 78221985 78221985 1 + T C UCEC 78221982 + 78221962 78222002 41 TGCTGTGCTTCTGGGAGGTGCAGTACGGCATCCTGGCCGGG TGCTGTGCTTCTGGGAGGTGCAGCACGGCATCCTGGCCGGG < 41bp 0.533147905307383 0.741807469930331 0.31144172 0.32115903 prediction 0.417319129245896 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78221982 chr17:78221985 nonsynonymous SNV 0.992 5 24 hm5C_associated_SNPs_125337 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr17:78221964-78221993
64251 chr12 104697561 104697561 1 + C A rs61937909 104697557 + 104697537 104697577 41 CTAACTGCCGCCACTTTCCACACGCTGGGAGGGCCGTTACC CTAACTGCCGCCACTTTCCACACGATGGGAGGGCCGTTACC < 41bp 0.353129905748549 0.708654049120245 0.07008737 0.17842087 prediction 0.417308098240491 Functional Gain - EID3 ENSG00000255150 UTR5 Human protein_coding chr12:104697557 chr12:104697561 . . 0 25 hm5C_associated_SNPs_125342 0 0 3 SLTM POSTAR2 ENCODE chr12:104697485-104697619
64251 chr19 11152082 11152082 1 + C T SKCM 11152081 + 11152061 11152101 41 AGCGACGCCGGCTCCTCCACCCCGACCACCAGCACCCGCAG AGCGACGCCGGCTCCTCCACCTCGACCACCAGCACCCGCAG < 41bp 0.634485318619341 0.84313887274586 0.42370895 0.3192472 prediction 0.417307108253038 Functional Gain - SMARCA4 ENSG00000127616 CDS Human protein_coding chr19:11152081 chr19:11152082 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_125343 0 0 4 GRWD1 POSTAR2 ENCODE chr19:11152040-11152089
64251 chr4 90034191 90034191 1 + T C rs117596423 90034189 + 90034169 90034209 41 AGCTTGACATTATTAAGAAACTTGAGGAAGGCATCTCTTTC AGCTTGACATTATTAAGAAACTCGAGGAAGGCATCTCTTTC < 41bp 0.639603700790314 0.848253876817499 0.18549207 0.25259966 prediction 0.41730035205437 Functional Gain - TIGD2 ENSG00000180346 CDS Human protein_coding chr4:90034189 chr4:90034191 synonymous SNV . 0 23 hm5C_associated_SNPs_125345 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:90034153-90034191
64251 chr22 39112055 39112055 1 + C T SKCM 39112054 + 39112034 39112074 41 CGCGTGCGTGATTACCTGGTCCGGAAACGAGTAGGAGACAA CGCGTGCGTGATTACCTGGTCTGGAAACGAGTAGGAGACAA < 41bp 0.62126814252825 0.829915162369579 0.29430097 0.35385936 prediction 0.417294039682657 Functional Gain - GTPBP1 ENSG00000100226 CDS Human protein_coding chr22:39112054 chr22:39112055 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_125347 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr22:39112040-39112060
64251 chr3 185332406 185332406 1 + C T SKCM 185332405 + 185332385 185332425 41 GAAGAAGTGTCGGCCCGACTCCGCCTGGGCAGTGGAAGCAA GAAGAAGTGTCGGCCCGACTCTGCCTGGGCAGTGGAAGCAA < 41bp 0.633258402316129 0.841904647009951 0.026623398 0.02643326 prediction 0.417292489387643 Functional Gain - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185332405 chr3:185332406 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_125348 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr3:185332385-185332418
64251 chr2 131130789 131130789 1 + C T LUSC 131130788 + 131130768 131130808 41 GACCCGCCTGCTGAGTGGACCCGGGTGTAAGTCTAACGCCA GACCCGCCTGCTGAGTGGACCTGGGTGTAAGTCTAACGCCA < 41bp 0.486892906581543 0.708637601516068 0.91633344 0.9036393 prediction 0.417275203032137 Functional Gain - PTPN18 ENSG00000072135 CDS Human protein_coding chr2:131130788 chr2:131130789 nonsynonymous SNV 0.776 3 22 hm5C_associated_SNPs_125353 0 0 1 PPIG POSTAR2 ENCODE chr2:131130729-131130797
64251 chr12 111856413 111856413 1 + C T rs531156627 111856412 + 111856392 111856432 41 GCCGCTCGGCCGGGGAGCTGCCAGCGGCCCACACCGCTGCC GCCGCTCGGCCGGGGAGCTGCTAGCGGCCCACACCGCTGCC < 41bp 0.57785194093145 0.786484494590573 0.8764562 0.6208833 prediction 0.417265107318246 Functional Gain - SH2B3 ENSG00000111252 CDS Human protein_coding chr12:111856412 chr12:111856413 nonsynonymous SNV 0.130 1 22 hm5C_associated_SNPs_125356 0 0 1 DDX3X POSTAR2 ENCODE chr12:111856383-111856432
64251 chr2 179478856 179478856 1 + A G UCEC 179478853 + 179478833 179478873 41 ACATGTTTTCTGCAGCAACTCTGAAGATGTACTCTTTATTG ACATGTTTTCTGCAGCAACTCTGGAGATGTACTCTTTATTG < 41bp 0.532363519853504 0.740985541832778 0.11272475 0.25705594 prediction 0.417244043958548 Functional Gain - TTN ENSG00000155657 CDS Human protein_coding chr2:179478853 chr2:179478856 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_125359 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:179478827-179478880
64251 chr19 58199603 58199603 1 + C T LGG 58199602 + 58199582 58199622 41 GAATGTGGGAAATCCTTTAGCCGCAAATCTAACCTCATTCG GAATGTGGGAAATCCTTTAGCTGCAAATCTAACCTCATTCG < 41bp 0.47858546442919 0.708618082596749 0.16143396 0.096860975 prediction 0.417236165193497 Functional Gain - ZNF551 ENSG00000204519 CDS Human protein_coding chr19:58199602 chr19:58199603 nonsynonymous SNV 0.014 0 22 hm5C_associated_SNPs_125360 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:58199595-58199612
64251 chr22 38271859 38271859 1 + C A OV 38271858 + 38271838 38271878 41 CCTTCTACAGAGTATGTATTCCCGTGTGCCAGAGTGCCAGG CCTTCTACAGAGTATGTATTCACGTGTGCCAGAGTGCCAGG < 41bp 0.638138542374037 0.846746742103359 0.16681135 0.4119519 prediction 0.417216399458644 Functional Gain - EIF3L ENSG00000100129 CDS Human protein_coding chr22:38271858 chr22:38271859 synonymous SNV . 0 22 hm5C_associated_SNPs_125364 0 0 2 METAP2 POSTAR2 ENCODE chr22:38271847-38271870
64251 chr16 4556962 4556962 1 + C T UCEC 4556961 + 4556941 4556981 41 ACACGACCGGGCAGAAAACACCCAGTTTGTCAAGGACTTCT ACACGACCGGGCAGAAAACACTCAGTTTGTCAAGGACTTCT < 41bp 0.444075149448924 0.708600454874755 0.17833015 0.17632657 prediction 0.41720090974951 Functional Gain - HMOX2 ENSG00000103415 CDS Human protein_coding chr16:4556961 chr16:4556962 synonymous SNV . 0 22 hm5C_associated_SNPs_125365 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:4556957-4556989
64251 chr6 30312962 30312962 1 + T G rs201417696 30312958 + 30312938 30312978 41 GCGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCC GCGCGGCGGTGATGGCGGGGCCGGGGAAGGACCGCGAGGCC < 41bp 0.504375290646983 0.712972355464845 0.88127005 0.90335214 prediction 0.417194129635724 Functional Gain - RPP21 ENSG00000241370 CDS Human protein_coding chr6:30312958 chr6:30312962 nonsynonymous SNV 0.962 4 25 hm5C_associated_SNPs_125368 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:30312960-30312980
64251 chr12 53647903 53647903 1 + C T COAD 53647902 + 53647882 53647922 41 GGCAGTGGTGGGACTCTTCACCGTGGTAAGGCATGATGCTG GGCAGTGGTGGGACTCTTCACTGTGGTAAGGCATGATGCTG < 41bp 0.482044504642761 0.70859297524328 0.5355365 0.24439842 prediction 0.41718595048656 Functional Gain - MFSD5 ENSG00000182544 CDS Human protein_coding chr12:53647902 chr12:53647903 synonymous SNV . 0 22 hm5C_associated_SNPs_125370 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr12:53647893-53647916
64251 chr6 28327463 28327463 1 + T G SKCM 28327459 + 28327439 28327479 41 AAGGTGGAGGAAGAAGAAGCCGGTTTTCCCAGTAGCCCAGA AAGGTGGAGGAAGAAGAAGCCGGTGTTCCCAGTAGCCCAGA < 41bp 0.50945348879161 0.718034185327954 0.62070787 0.8054445 prediction 0.417161393072689 Functional Gain - ZKSCAN3 ENSG00000189298 CDS Human protein_coding chr6:28327459 chr6:28327463 nonsynonymous SNV 0.017 0 25 hm5C_associated_SNPs_125374 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:28327451-28327478
64251 chr20 42271262 42271262 1 + C T BRCA 42271261 + 42271241 42271281 41 GTGGAGTTCAAGAAATTGAACCAGGTACAGAGCCTACAAGG GTGGAGTTCAAGAAATTGAACTAGGTACAGAGCCTACAAGG < 41bp 0.470313817739507 0.708568375242345 0.9428104 0.8166324 prediction 0.417136750484689 Functional Gain - IFT52 ENSG00000101052 CDS Human protein_coding chr20:42271261 chr20:42271262 stopgain 0.997 1 22 hm5C_associated_SNPs_125382 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:42271232-42271262
64251 chr15 44084568 44084568 1 + C A rs201862042 44084564 + 44084544 44084584 41 ACGGAGGCAGGTTGGAGCCGCTGCCGTCGCCATGACCCGTG ACGGAGGCAGGTTGGAGCCGCTGCAGTCGCCATGACCCGTG < 41bp 0.649650434522851 0.858216771326697 0.28228647 0.44970128 prediction 0.417132673607692 Functional Gain - SERF2-C15ORF63 ENSG00000140264 UTR5 Human protein_coding chr15:44084564 chr15:44084568 . . 0 25 hm5C_associated_SNPs_125384 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:44084541-44084576
64251 chr17 60692177 60692177 1 + A G rs568319671 60692174 + 60692154 60692194 41 AGCTGCTAAGCAAAGGGTCTCACAGGTCGAGCACAGTGCTG AGCTGCTAAGCAAAGGGTCTCACGGGTCGAGCACAGTGCTG < 41bp 0.517879226819077 0.726434433692395 0.16542083 0.41977423 prediction 0.417110413746636 Functional Gain - TLK2 ENSG00000146872;ENSG00000011028 intergenic Human other chr17:60692174 chr17:60692177 . . 0 24 hm5C_associated_SNPs_125391 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:60692166-60692194
64251 chr14 59798054 59798054 1 + C T LUSC 59798053 + 59798033 59798073 41 CTCTACCAGGTGGGATGCTTCCCCCTCCACCGCCTCCCCTC CTCTACCAGGTGGGATGCTTCTCCCTCCACCGCCTCCCCTC < 41bp 0.440647076000127 0.708548393700567 0.2783332 0.4704238 prediction 0.417096787401134 Functional Gain - DAAM1 ENSG00000100592 CDS Human protein_coding chr14:59798053 chr14:59798054 nonsynonymous SNV 0.696 0 22 hm5C_associated_SNPs_125393 0 0 2 PCBP2 POSTAR2 ENCODE chr14:59798036-59798148
64251 chr18 10548362 10548362 1 + C T COAD 10548361 + 10548341 10548381 41 GTAGCTGCAGAAAGATGTGTCCGGGAGAGCTATAGGTAAGA GTAGCTGCAGAAAGATGTGTCTGGGAGAGCTATAGGTAAGA < 41bp 0.461988849197491 0.70853303135597 0.33187652 0.27176473 prediction 0.41706606271194 Functional Gain - NAPG ENSG00000134265 CDS Human protein_coding chr18:10548361 chr18:10548362 nonsynonymous SNV 0.994 3 22 hm5C_associated_SNPs_125395 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:10548338-10548365
64251 chr9 140508859 140508859 1 + C T SKCM 140508858 + 140508838 140508878 41 GCGCAGTGGCACGAGCAGATCCTGGTGCCTGCCTTGCCCCA GCGCAGTGGCACGAGCAGATCTTGGTGCCTGCCTTGCCCCA < 41bp 0.59405721132406 0.802586451556464 0.8805038 0.8164568 prediction 0.417058480464807 Functional Gain - ARRDC1 ENSG00000197070 CDS Human protein_coding chr9:140508858 chr9:140508859 synonymous SNV . 0 22 hm5C_associated_SNPs_125398 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:140508855-140508903
64251 chr5 162945233 162945233 1 + C T COAD 162945232 + 162945212 162945252 41 CTGTCCTAGGAGCACAACGTCCGAGAAATGCTCAGCTTGAC CTGTCCTAGGAGCACAACGTCTGAGAAATGCTCAGCTTGAC < 41bp 0.537501179687829 0.746029579347011 0.27336848 0.08270246 prediction 0.417056799318364 Functional Gain - MAT2B ENSG00000038274 CDS Human protein_coding chr5:162945232 chr5:162945233 nonsynonymous SNV 0.985 4 22 hm5C_associated_SNPs_125400 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:162945201-162945298
64251 chr19 50098592 50098592 1 + C T rs8109974 50098591 + 50098571 50098611 41 GCCAACCTGGCCTGCAGCCCCCTGGGTGGTGGGGAGCCCTC GCCAACCTGGCCTGCAGCCCCTTGGGTGGTGGGGAGCCCTC < 41bp 0.547325672450526 0.755831952860674 0.4317161 0.53819275 prediction 0.417012560820295 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50098591 chr19:50098592 synonymous SNV . 0 22 hm5C_associated_SNPs_125408 0 0 1 FASTKD2 POSTAR2 ENCODE chr19:50098575-50098631
64251 chr19 40485783 40485783 1 + C T BLCA 40485782 + 40485762 40485802 41 AAGTATCTGGGTGAGGGCCCCCGCATGGTCCGGGATGTGTT AAGTATCTGGGTGAGGGCCCCTGCATGGTCCGGGATGTGTT < 41bp 0.640158814178031 0.848662594252704 0.19079798 0.5596232 prediction 0.417007560149347 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40485782 chr19:40485783 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_125409 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:40485731-40485796
64251 chr14 75201605 75201605 1 + C T UCEC 75201604 + 75201584 75201624 41 GATACAACATTGAACGGATGCCAGATGATTATGGAGCCCCT GATACAACATTGAACGGATGCTAGATGATTATGGAGCCCCT < 41bp 0.588268277808291 0.796770109955882 0.4276606 0.53204346 prediction 0.417003664295183 Functional Gain - FCF1 ENSG00000119616 CDS Human protein_coding chr14:75201604 chr14:75201605 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_125412 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr14:75201589-75201607
64251 chr17 52978103 52978103 1 + C G rs367846587 52978102 + 52978082 52978122 41 CAGCGGCAGCGCAGAACGCACCGCCTCTGCCAGAGCCCGGG CAGCGGCAGCGCAGAACGCACGGCCTCTGCCAGAGCCCGGG < 41bp 0.411334461745225 0.708494333565187 0.14877087 0.38199157 prediction 0.416988667130373 Functional Gain - TOM1L1 ENSG00000141198 UTR5 Human protein_coding chr17:52978102 chr17:52978103 . . 0 22 hm5C_associated_SNPs_125417 0 0 1 DDX3X POSTAR2 ENCODE chr17:52978103-52978218
64251 chr10 135123307 135123307 1 + C G STAD 135123306 + 135123286 135123326 41 CGCGTTTGCCTGCCAGGTGGCCGGCTGCTGCCAGGTGTTCG CGCGTTTGCCTGCCAGGTGGCGGGCTGCTGCCAGGTGTTCG < 41bp 0.376341260773814 0.708489163944935 0.8281791 0.897123 prediction 0.416978327889871 Functional Gain - ZNF511 ENSG00000198546 CDS Human protein_coding chr10:135123306 chr10:135123307 synonymous SNV . 0 22 hm5C_associated_SNPs_125420 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:135123302-135123334
64251 chr8 67590068 67590068 1 + T C CESC 67590066 + 67590046 67590086 41 AAAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACT AAAGGCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACT < 41bp 0.454510144292873 0.708477441679017 0.1817058 0.1731962 prediction 0.416954883358034 Functional Gain - C8orf44 ENSG00000213865 CDS Human protein_coding chr8:67590066 chr8:67590068 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_125423 0 0 1 U2AF1 POSTAR2 ENCODE chr8:67589960-67590068
64251 chr22 39414439 39414439 1 + A G rs181625970 39414436 + 39414416 39414456 41 CTGTCTCCTCTAGCCTCCTGCTCATGCTGCACGGGCCTCCC CTGTCTCCTCTAGCCTCCTGCTCGTGCTGCACGGGCCTCCC < 41bp 0.462306369727134 0.708475367900142 0.19522232 0.2990979 prediction 0.416950735800285 Functional Gain - APOBEC3C ENSG00000244509 UTR3 Human protein_coding chr22:39414436 chr22:39414439 . . 0 24 hm5C_associated_SNPs_125425 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr22:39414391-39414441
64251 chr1 113616189 113616189 1 + T A BRCA 113616185 + 113616165 113616205 41 CCTGCTCCTGCCGCATTCCTCTCCTGGACTGCAGTCGCAGG CCTGCTCCTGCCGCATTCCTCTCCAGGACTGCAGTCGCAGG < 41bp 0.667544905401155 0.876000083565971 0.25292134 0.9465207 prediction 0.416910356329631 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113616185 chr1:113616189 nonsynonymous SNV 0.763 3 25 hm5C_associated_SNPs_125432 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:113616165-113616194
64251 chr8 99169912 99169912 1 + C T rs145798300 99169911 + 99169891 99169931 41 TCTGAGGATAGTCGGGGAGGCCGGCGAGCTCCCGGCAGAGG TCTGAGGATAGTCGGGGAGGCTGGCGAGCTCCCGGCAGAGG < 41bp 0.48898355934299 0.708447628252712 0.8831301 0.82308507 prediction 0.416895256505424 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99169911 chr8:99169912 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_125438 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr8:99169883-99169914
64251 chr1 16091674 16091674 1 + C T SKCM 16091673 + 16091653 16091693 41 AGGCCCAGCCCCTGGACAACCCCTGGCAGAGCTGCAGCCAC AGGCCCAGCCCCTGGACAACCTCTGGCAGAGCTGCAGCCAC < 41bp 0.449692216276772 0.708446799329486 0.18288586 0.17332512 prediction 0.416893598658972 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091673 chr1:16091674 nonsynonymous SNV 0.019 0 22 hm5C_associated_SNPs_125439 0 0 1 PPIG POSTAR2 ENCODE chr1:16091522-16091689
64251 chr19 577929 577929 1 + C T STAD 577928 + 577908 577948 41 TCCCAGCTCTGGGACGGCGCCCGGCTGGACCGCGTCCACAT TCCCAGCTCTGGGACGGCGCCTGGCTGGACCGCGTCCACAT < 41bp 0.549604659851947 0.758051398167156 0.11604312 0.054788828 prediction 0.416893476630417 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:577928 chr19:577929 nonsynonymous SNV 0.917 1 22 hm5C_associated_SNPs_125440 0 0 2 CSTF2T POSTAR2 ENCODE chr19:577893-577943
64251 chr8 8875838 8875838 1 + A G UCEC 8875835 + 8875815 8875855 41 AGACAGAGCTGATACCTTCCCTCAGGTACTAAAAAAAGTAA AGACAGAGCTGATACCTTCCCTCGGGTACTAAAAAAAGTAA < 41bp 0.485254585032407 0.708430792486928 0.060655504 0.08465344 prediction 0.416861584973856 Functional Gain - ERI1 ENSG00000104626 CDS Human protein_coding chr8:8875835 chr8:8875838 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_125449 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr8:8875822-8875843
64251 chr1 168269680 168269680 1 + C T ESCA 168269679 + 168269659 168269699 41 GAAATCACCTAAGAGACGTACCGGAGGCTATCTCTGAGAGC GAAATCACCTAAGAGACGTACTGGAGGCTATCTCTGAGAGC < 41bp 0.45738758787536 0.708427994283474 0.7534232 0.40280542 prediction 0.416855988566948 Functional Gain - TBX19 ENSG00000143178 CDS Human protein_coding chr1:168269679 chr1:168269680 nonsynonymous SNV 0.036 1 22 hm5C_associated_SNPs_125452 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:168269668-168269701
64251 chr16 8722732 8722732 1 + T C rs34078995 8722730 + 8722710 8722750 41 GGTCCCCTCCAGGAAGTGGCCATGGTAATGAGGGTTTCTCC GGTCCCCTCCAGGAAGTGGCCACGGTAATGAGGGTTTCTCC < 41bp 0.62841280911136 0.836840229224521 0.349728 0.2852322 prediction 0.416854840226323 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8722730 chr16:8722732 synonymous SNV . 0 23 hm5C_associated_SNPs_125453 0 0 4 PPIG POSTAR2 ENCODE chr16:8722672-8722739
64251 chr2 27656229 27656229 1 + T C COAD 27656226 + 27656206 27656246 41 TTCAGCTCCTGGCCTGACATCAGTGTCACCTCCTGTGACCT TTCAGCTCCTGGCCTGACATCAGCGTCACCTCCTGTGACCT < 41bp 0.524360831967495 0.732786852152015 0.026409507 0.37604204 prediction 0.416852040369039 Functional Gain - NRBP1 ENSG00000115216 CDS Human protein_coding chr2:27656226 chr2:27656229 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_125454 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:27656197-27656235
64251 chr3 10290943 10290943 1 + C A STAD 10290942 + 10290922 10290962 41 GCAGCACGTCGGAAGGGTGTCCCCGCAAGCGCAGCTGCCTC GCAGCACGTCGGAAGGGTGTCACCGCAAGCGCAGCTGCCTC < 41bp 0.612774753277682 0.821186920159863 0.063856065 0.0713512 prediction 0.416824333764364 Functional Gain - TATDN2 ENSG00000157014 CDS Human protein_coding chr3:10290942 chr3:10290943 nonsynonymous SNV 0.982 2 22 hm5C_associated_SNPs_125457 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:10290911-10290947
64251 chr5 170834720 170834720 1 + A G LAML 170834717 + 170834697 170834737 41 TTAATAGGGTGGTTCTCTTCCCAAAGTGGAAGCCAAATTCA TTAATAGGGTGGTTCTCTTCCCAGAGTGGAAGCCAAATTCA < 41bp 0.477845545824539 0.708405823040933 0.05505842 0.33035275 prediction 0.416811646081865 Functional Gain - NPM1 ENSG00000181163 CDS Human protein_coding chr5:170834717 chr5:170834720 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_125461 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:170834659-170834720
64251 chr8 145583657 145583657 1 + C T LUAD 145583656 + 145583636 145583676 41 GCCCTAGTGCAGGGTGTGGGCCGCCTCGAGTGCCCGCCAGC GCCCTAGTGCAGGGTGTGGGCTGCCTCGAGTGCCCGCCAGC < 41bp 0.484847168501928 0.70840286809878 0.28974164 0.3249413 prediction 0.416805736197559 Functional Gain - SLC52A2 ENSG00000185803 CDS Human protein_coding chr8:145583656 chr8:145583657 nonsynonymous SNV 0.682 1 22 hm5C_associated_SNPs_125462 1 0 1 RPS3 POSTAR2 ENCODE chr8:145583609-145583657
64251 chr2 131976361 131976361 1 + T C LUAD 131976359 + 131976339 131976379 41 GACTACGATGACAGCGCCTTCATGGAGCCCAGGTACCACGT GACTACGATGACAGCGCCTTCACGGAGCCCAGGTACCACGT < 41bp 0.604071661599137 0.812474308303491 0.32003254 0.8930849 prediction 0.416805293408709 Functional Gain - POTEE ENSG00000188219 CDS Human protein_coding chr2:131976359 chr2:131976361 nonsynonymous SNV 0.023 1 23 hm5C_associated_SNPs_125463 0 0 13 DDX24 POSTAR2 ENCODE chr2:131976256-131976375
64251 chr8 17133946 17133946 1 + C T UCEC 17133945 + 17133925 17133965 41 GGTACAAGATGCCAGATGTCCCTGATGCATTTCCAGAACTC GGTACAAGATGCCAGATGTCCTTGATGCATTTCCAGAACTC < 41bp 0.4462895494944 0.708401585867582 0.06568366 0.13201481 prediction 0.416803171735163 Functional Gain - VPS37A ENSG00000155975 CDS Human protein_coding chr8:17133945 chr8:17133946 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_125464 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr8:17133932-17133967
64251 chr11 34139840 34139840 1 + C T rs35674959 34139839 + 34139819 34139859 41 AGGCCCTGCCTCCCCAGACTCCGGTGAGTCTGTGCTGGGGT AGGCCCTGCCTCCCCAGACTCTGGTGAGTCTGTGCTGGGGT < 41bp 0.460096854396907 0.708400839261097 0.33317816 0.45647213 prediction 0.416801678522194 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34139839 chr11:34139840 nonsynonymous SNV 0.597 1 22 hm5C_associated_SNPs_125465 0 0 4 DDX24 POSTAR2 ENCODE chr11:34139785-34139840
64251 chr1 1459279 1459279 1 + C T UCEC 1459278 + 1459258 1459298 41 ACAAGGAACACCAAGAAGAACCGCAGCCTGTACAGGAACAT ACAAGGAACACCAAGAAGAACTGCAGCCTGTACAGGAACAT < 41bp 0.440236997841074 0.70838617440041 0.13054559 0.36937135 prediction 0.416772348800821 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1459278 chr1:1459279 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_125470 0 0 9 NOP58 POSTAR2 GSE43666,GSM1067861 chr1:1459241-1459279
64251 chr5 53813966 53813966 1 + C A rs374095539 53813962 + 53813942 53813982 41 TCCTATGTGCAGGTGATCCGCGCCCCCGAGCCTGGCCCGGC TCCTATGTGCAGGTGATCCGCGCCACCGAGCCTGGCCCGGC < 41bp 0.722676982274035 0.93105999974791 0.2609562 0.42527452 prediction 0.41676603494775 Functional Gain - SNX18 ENSG00000178996 CDS Human protein_coding chr5:53813962 chr5:53813966 nonsynonymous SNV 0.589 0 25 hm5C_associated_SNPs_125472 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:53813956-53813984
64251 chr21 48078690 48078690 1 + C T COAD 48078689 + 48078669 48078709 41 ATCGAGTCCATCCTGTATGCCCGGGATGCCTGGCTGAAGGA ATCGAGTCCATCCTGTATGCCTGGGATGCCTGGCTGAAGGA < 41bp 0.558381318142316 0.766762779152341 0.3939046 0.37825894 prediction 0.416762922020049 Functional Gain - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48078689 chr21:48078690 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_125474 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr21:48078658-48078690
64251 chr13 28752052 28752052 1 + A G UCEC 28752049 + 28752029 28752069 41 TGTTTAATGACTTTGGTGCCCTCAACATCTCTCAGAGACGA TGTTTAATGACTTTGGTGCCCTCGACATCTCTCAGAGACGA < 41bp 0.484594768958626 0.708379679555914 0.07862753 0.058921456 prediction 0.416759359111827 Functional Gain - PAN3 ENSG00000152520 CDS Human protein_coding chr13:28752049 chr13:28752052 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125476 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:28752033-28752062
64251 chr20 61461725 61461725 1 + C T COAD 61461724 + 61461704 61461744 41 TCTTCCAGGGGGCCCTCGGCCCACAAGGCCCTCCCGGAGCC TCTTCCAGGGGGCCCTCGGCCTACAAGGCCCTCCCGGAGCC < 41bp 0.636840297626423 0.845214371816758 0.0936321 0.8460167 prediction 0.41674814838067 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61461724 chr20:61461725 nonsynonymous SNV 0.981 2 22 hm5C_associated_SNPs_125479 0 0 5 BUD13 POSTAR2 ENCODE chr20:61461711-61461735
64251 chr2 10187893 10187893 1 + C A rs113903638 10187892 + 10187872 10187912 41 GGATGTTCTCCAGTCCTCTGCCGTAGTGGCCAGAGCTCTGA GGATGTTCTCCAGTCCTCTGCAGTAGTGGCCAGAGCTCTGA < 41bp 0.442791824632691 0.708371463808532 0.07026258 0.1238786 prediction 0.416742927617063 Functional Gain - KLF11 ENSG00000172059 CDS Human protein_coding chr2:10187892 chr2:10187893 synonymous SNV . 0 22 hm5C_associated_SNPs_125482 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr2:10187862-10187897
64251 chr7 64166787 64166787 1 + A G UCEC 64166784 + 64166764 64166804 41 AAAGTGACACTGAGAAGATACGGAAAATGTGAATATGAGAA AAAGTGACACTGAGAAGATACGGGAAATGTGAATATGAGAA < 41bp 0.549856640793596 0.758221461300237 0.066998065 0.2055344 prediction 0.416729641013282 Functional Gain - ZNF107 ENSG00000196247 CDS Human protein_coding chr7:64166784 chr7:64166787 synonymous SNV . 0 24 hm5C_associated_SNPs_125483 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:64166740-64166825
64251 chr11 209728 209728 1 + C T UCEC 209727 + 209707 209747 41 ACAGAGCGTGTGGGGCTGTACCGTGAGAGGAGCTTCCCCCA ACAGAGCGTGTGGGGCTGTACTGTGAGAGGAGCTTCCCCCA < 41bp 0.587644617598811 0.795998227489357 0.7557579 0.40342435 prediction 0.416707219781091 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:209727 chr11:209728 nonsynonymous SNV 0.271 2 22 hm5C_associated_SNPs_125485 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr11:209708-209731
64251 chr7 37960325 37960325 1 + T A DLBC 37960321 + 37960301 37960341 41 AGGCAGAAATAGCTCCCGCGCGATTCACTGGAGCCTTCCCC AGGCAGAAATAGCTCCCGCGCGATACACTGGAGCCTTCCCC < 41bp 0.421077031682697 0.708346662348101 0.1971179 0.29783016 prediction 0.416693324696201 Functional Gain - EPDR1 ENSG00000086289 CDS Human protein_coding chr7:37960321 chr7:37960325 synonymous SNV . 0 25 hm5C_associated_SNPs_125489 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:37960320-37960340
64251 chr1 10684462 10684462 1 + C T SKCM 10684461 + 10684441 10684481 41 ATTCAGCAGCAGCAGAAGATCCAGGAGCTTGCCCACGAGCT ATTCAGCAGCAGCAGAAGATCTAGGAGCTTGCCCACGAGCT < 41bp 0.621693347620622 0.830039654979675 0.8556634 0.43275827 prediction 0.416692614718106 Functional Gain - PEX14 ENSG00000142655 CDS Human protein_coding chr1:10684461 chr1:10684462 stopgain 0.999 1 22 hm5C_associated_SNPs_125490 1 0 1 BUD13 POSTAR2 ENCODE chr1:10684400-10684465
64251 chr2 33413881 33413881 1 + A G LIHC 33413878 + 33413858 33413898 41 CTACCCCGTGGCTGCTAAGACACAGCTTGGCCGGTGCTTCC CTACCCCGTGGCTGCTAAGACACGGCTTGGCCGGTGCTTCC < 41bp 0.471256190810477 0.708338462998863 0.11066836 0.34639263 prediction 0.416676925997726 Functional Gain - LTBP1 ENSG00000049323 CDS Human protein_coding chr2:33413878 chr2:33413881 nonsynonymous SNV 0.990 3 24 hm5C_associated_SNPs_125493 0 0 1 IGF2BP2 POSTAR2 ENCODE chr2:33413720-33413912
64251 chr19 39966971 39966971 1 + C T SKCM 39966970 + 39966950 39966990 41 GATGGTGAGGATGGCATTGTCCGTATGGACCTTGATGAGCA GATGGTGAGGATGGCATTGTCTGTATGGACCTTGATGAGCA < 41bp 0.585076316549424 0.793414774912992 0.11501706 0.52638984 prediction 0.416676916727135 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39966970 chr19:39966971 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_125494 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39966919-39966975
64251 chrX 152615249 152615249 1 + C T rs148426956 152615248 + 152615228 152615268 41 GAAGCAGGCTCTTTCCTCATCCGAGATGCGGACTCCCTGTC GAAGCAGGCTCTTTCCTCATCTGAGATGCGGACTCCCTGTC < 41bp 0.507028955961785 0.715359502803494 0.8142612 0.40302414 prediction 0.416661093683418 Functional Gain - ZNF275 ENSG00000063587 UTR3 Human protein_coding chrX:152615248 chrX:152615249 . . 0 22 hm5C_associated_SNPs_125500 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:152615243-152615364
64251 chr7 55221782 55221782 1 + C T GBM 55221781 + 55221761 55221801 41 CTCTACAACCCCACCACGTACCAGATGGATGTGAACCCCGA CTCTACAACCCCACCACGTACTAGATGGATGTGAACCCCGA < 41bp 0.435791123408122 0.708330316082023 0.36773828 0.44017854 prediction 0.416660632164046 Functional Gain - EGFR ENSG00000146648 CDS Human protein_coding chr7:55221781 chr7:55221782 stopgain 0.918 1 22 hm5C_associated_SNPs_125501 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:55221725-55221783
64251 chr22 50279870 50279870 1 + C T COAD 50279869 + 50279849 50279889 41 CAGAACCTGCTGAGCCTCGCCCGGAAGATCTGCGAGCGGGT CAGAACCTGCTGAGCCTCGCCTGGAAGATCTGCGAGCGGGT < 41bp 0.598231622781412 0.806556775410494 0.8593665 0.42129004 prediction 0.416650305258165 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279869 chr22:50279870 nonsynonymous SNV 0.011 3 22 hm5C_associated_SNPs_125506 0 0 1 FXR2 POSTAR2 ENCODE chr22:50279831-50279885
64251 chr19 50001239 50001239 1 + C A THCA 50001238 + 50001218 50001258 41 CGAGACTATCTGCACTACATCCGCAAGTACAACCGCTTCGA CGAGACTATCTGCACTACATCAGCAAGTACAACCGCTTCGA < 41bp 0.633776856132209 0.842090534436442 0.08225167 0.28209 prediction 0.416627356608467 Functional Gain - RPS11 ENSG00000142534 CDS Human protein_coding chr19:50001238 chr19:50001239 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_125510 0 0 59 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:50001160-50001280
64251 chr17 73702604 73702604 1 + T G rs143414711 73702602 + 73702582 73702622 41 TGAAGAAGGCCAAGCAGTGACCTGAGGGGCCACCCTAGGAC TGAAGAAGGCCAAGCAGTGACCGGAGGGGCCACCCTAGGAC < 41bp 0.697401248996164 0.905711972898425 0.36294055 0.8977672 prediction 0.416621447804521 Functional Gain - SAP30BP ENSG00000161526 UTR3 Human protein_coding chr17:73702602 chr17:73702604 . . 0 23 hm5C_associated_SNPs_125511 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:73702598-73702623
64251 chr12 14613832 14613832 1 + T A SKCM 14613828 + 14613808 14613848 41 CGTTCCTTCTGTGCCCAGTCCTAGTATTCAAAGGAACCCTA CGTTCCTTCTGTGCCCAGTCCTAGAATTCAAAGGAACCCTA < 41bp 0.357613337669526 0.708306343690132 0.07024953 0.05914566 prediction 0.416612687380264 Functional Gain - ATF7IP ENSG00000171681 CDS Human protein_coding chr12:14613828 chr12:14613832 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_125514 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr12:14613831-14613880
64251 chr14 105223068 105223068 1 + C T STAD 105223067 + 105223047 105223087 41 CACCTGCTGGGGCTGCGGCTCCGTGGCCTGTACCCTGTGTG CACCTGCTGGGGCTGCGGCTCTGTGGCCTGTACCCTGTGTG < 41bp 0.489574101920425 0.708302595292099 0.2681576 0.21622366 prediction 0.416605190584199 Functional Gain - SIVA1 ENSG00000184990 CDS Human protein_coding chr14:105223067 chr14:105223068 synonymous SNV . 0 22 hm5C_associated_SNPs_125515 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:105222944-105223071
64251 chr20 25657433 25657433 1 - T C OV 25657436 - 25657416 25657456 41 AGGCCAGAGGGAAAATCCTACAGAAATAGACAAAGTATTGA AGGCCAGAGGGAAAATCCTACAGGAATAGACAAAGTATTGA < 41bp 0.572283412941847 0.780573128601205 0.25259352 0.4779322 prediction 0.416579431318716 Functional Gain - ZNF337 ENSG00000130684 CDS Human protein_coding chr20:25657436 chr20:25657433 nonsynonymous SNV 0.510 0 24 hm5C_associated_SNPs_125519 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:25657433-25657459
64251 chr11 36484208 36484208 1 + T C rs514352 36484205 + 36484185 36484225 41 TGCTCCAGTGAGCCCAACATCACTGACAACCCTGACGGACT TGCTCCAGTGAGCCCAACATCACCGACAACCCTGACGGACT < 41bp 0.51367969618267 0.721966972299125 0.2768413 0.32739437 prediction 0.416574552232909 Functional Gain - PRR5L ENSG00000135362 CDS Human protein_coding chr11:36484205 chr11:36484208 synonymous SNV . 0 24 hm5C_associated_SNPs_125521 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:36484196-36484217
64251 chrX 100880275 100880275 1 + T A COAD 100880271 + 100880251 100880291 41 AAGGGCCAGGGCTACCCGGGCACGTCGGGCTGTCCAGAAAC AAGGGCCAGGGCTACCCGGGCACGACGGGCTGTCCAGAAAC < 41bp 0.691025871952536 0.89930580360086 0.39137402 0.3272049 prediction 0.416559863296647 Functional Gain - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880271 chrX:100880275 synonymous SNV . 0 25 hm5C_associated_SNPs_125524 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350201 chrX:100880250-100880284
64251 chr16 85690940 85690940 1 + C T rs138181231 85690939 + 85690919 85690959 41 CCGTCCAACACCCCTTGCATCCGGTGCCCACCCCACACCAC CCGTCCAACACCCCTTGCATCTGGTGCCCACCCCACACCAC < 41bp 0.459162926065017 0.708277933096424 0.46304554 0.23471159 prediction 0.416555866192847 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85690939 chr16:85690940 nonsynonymous SNV 0.019 3 22 hm5C_associated_SNPs_125526 0 0 2 BUD13 POSTAR2 ENCODE chr16:85690869-85690960
64251 chr1 2122734 2122734 1 + A G rs569922334 2122731 + 2122711 2122751 41 CCCTGTCCGTGACGCTTCTGCTCAGTAGCTGAGCACGCCCT CCCTGTCCGTGACGCTTCTGCTCGGTAGCTGAGCACGCCCT < 41bp 0.590508453533832 0.798786175117216 0.1556758 0.16978613 prediction 0.416555443166768 Functional Gain - FAAP20 ENSG00000269554 UTR3 Human other chr1:2122731 chr1:2122734 . . 0 24 hm5C_associated_SNPs_125527 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:2122708-2122746
64251 chr14 76965244 76965244 1 + C T ESCA 76965243 + 76965223 76965263 41 ACCACCTGGAGGTTTTCCTTCCGCAGAGGGCAGGTACGCAA ACCACCTGGAGGTTTTCCTTCTGCAGAGGGCAGGTACGCAA < 41bp 0.60579167790846 0.814067918886431 0.5829179 0.60812646 prediction 0.416552481955943 Functional Gain - ESRRB ENSG00000119715 CDS Human protein_coding chr14:76965243 chr14:76965244 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_125528 0 0 1 UPF1 POSTAR2 ENCODE chr14:76965178-76965269
64251 chr7 92027691 92027691 1 + C T SKCM 92027690 + 92027670 92027710 41 CCTTCCAGGCTGGACTCTGTCCCCAGAAATACAGATAGCCC CCTTCCAGGCTGGACTCTGTCTCCAGAAATACAGATAGCCC < 41bp 0.644436218282778 0.852706949036698 0.059333473 0.9322955 prediction 0.416541461507839 Functional Gain - ANKIB1 ENSG00000001629 CDS Human protein_coding chr7:92027690 chr7:92027691 nonsynonymous SNV 0.815 1 22 hm5C_associated_SNPs_125529 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr7:92027659-92027695
64251 chr6 37138794 37138794 1 + A G LIHC 37138791 + 37138771 37138811 41 CGTGGAGAAGGACCGGATTTCCGACTGGGGAGAGCTGGTGA CGTGGAGAAGGACCGGATTTCCGGCTGGGGAGAGCTGGTGA < 41bp 0.460726763076611 0.708265221530155 0.16552979 0.3290974 prediction 0.41653044306031 Functional Gain - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37138791 chr6:37138794 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_125532 0 0 13 BUD13 POSTAR2 ENCODE chr6:37138784-37138832
64251 chr12 2997125 2997125 1 + C T GBM 2997124 + 2997104 2997144 41 GGAAGCTTGTTCCCAGCCTACCAGAAACACCAAAACCGGGC GGAAGCTTGTTCCCAGCCTACTAGAAACACCAAAACCGGGC < 41bp 0.597599259531677 0.805854439302582 0.21239454 0.124038935 prediction 0.41651035954181 Functional Gain - RHNO1 ENSG00000171792 CDS Human protein_coding chr12:2997124 chr12:2997125 stopgain 0.005 0 22 hm5C_associated_SNPs_125537 0 0 2 UPF1 POSTAR2 GSE69586,GSM1704214 chr12:2997120-2997140
64251 chr1 222838837 222838837 1 + C T COAD 222838836 + 222838816 222838856 41 TACCACCCCCAACCCATGGTCCCCAGGAATACCCACCACCA TACCACCCCCAACCCATGGTCTCCAGGAATACCCACCACCA < 41bp 0.438925643852716 0.70825159026771 0.03601727 0.9246377 prediction 0.41650318053542 Functional Gain - MIA3 ENSG00000154305 CDS Human protein_coding chr1:222838836 chr1:222838837 nonsynonymous SNV 0.950 0 22 hm5C_associated_SNPs_125540 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:222838813-222838839
64251 chr16 30990683 30990683 1 + C A COAD 30990682 + 30990662 30990702 41 ACCGCCGCAGGCCAAGTTTCCCGGCCCAGCCTCCCGCAAGG ACCGCCGCAGGCCAAGTTTCCAGGCCCAGCCTCCCGCAAGG < 41bp 0.443343031431876 0.708242979803741 0.86068594 0.93953526 prediction 0.416485959607483 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990682 chr16:30990683 synonymous SNV . 0 22 hm5C_associated_SNPs_125545 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30990662-30990695
64251 chr15 66821250 66821250 1 + A G rs11071896 66821247 + 66821227 66821267 41 TCAAGCGTCTTTTCAAAGTTCGGAGTGATCTTGATTTTGCT TCAAGCGTCTTTTCAAAGTTCGGGGTGATCTTGATTTTGCT < 41bp 0.595323824494163 0.803542403766554 0.48280206 0.8818192 prediction 0.416437158544782 Functional Gain - ZWILCH ENSG00000174442 CDS Human protein_coding chr15:66821247 chr15:66821250 nonsynonymous SNV 0.240 0 24 hm5C_associated_SNPs_125555 0 1 6 TARDBP POSTAR2 DRA001158,DRS012387 chr15:66821202-66821268
64251 chr8 19824237 19824237 1 + T C rs58998793 19824235 + 19824215 19824255 41 ATGTCGGAGTAGAAATTGTTCCTGATGTGCCAGAACTTCGA ATGTCGGAGTAGAAATTGTTCCCGATGTGCCAGAACTTCGA < 41bp 0.538640294167372 0.746854099730552 0.12163988 0.106479585 prediction 0.416427611126359 Functional Gain - LPL ENSG00000175445 UTR3 Human protein_coding chr8:19824235 chr8:19824237 . . 0 23 hm5C_associated_SNPs_125560 1 0 2 HNRNPU POSTAR2 GSE34491,GSM850171 chr8:19824226-19824247
64251 chr8 23112816 23112816 1 + C T UCEC 23112815 + 23112795 23112835 41 CTCGCCCCTCTCCTCCCACCCCGTGGTGGCCCTGTCAGAGC CTCGCCCCTCTCCTCCCACCCTGTGGTGGCCCTGTCAGAGC < 41bp 0.439620112171732 0.70821178623608 0.15406385 0.098691136 prediction 0.416423572472161 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23112815 chr8:23112816 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_125561 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:23112780-23112825
64251 chr7 116593615 116593615 1 + C G HNSC 116593611 + 116593591 116593631 41 AAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCA AAACATGGCTGAAGCGGCCACGGGGTTTCTGGAGCAGCTCA < 41bp 0.661376216379662 0.869587749608502 0.6748231 0.89026654 prediction 0.416423066457679 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116593611 chr7:116593615 synonymous SNV . 0 25 hm5C_associated_SNPs_125562 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917662 chr7:116593600-116593620
64251 chr3 49050172 49050172 1 + C T UCEC 49050171 + 49050151 49050191 41 TGCTGGAGGCAGCTCCTGGTCCCGAGGGCTTCGGATTGTGT TGCTGGAGGCAGCTCCTGGTCTCGAGGGCTTCGGATTGTGT < 41bp 0.632898273511977 0.841108504737582 0.29476413 0.10556275 prediction 0.41642046245121 Functional Gain - WDR6 ENSG00000178252 CDS Human protein_coding chr3:49050171 chr3:49050172 nonsynonymous SNV 0.972 1 22 hm5C_associated_SNPs_125563 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:49050150-49050208
64251 chr12 69962837 69962837 1 + T A LUAD 69962833 + 69962813 69962853 41 GGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAG GGGTAGCTGTTGTAGCTGTCCAGAAAAAGACACTGTCCCAG < 41bp 0.384994564381936 0.708190921240468 0.36857313 0.36402893 prediction 0.416381842480936 Functional Gain - FRS2 ENSG00000166225 CDS Human protein_coding chr12:69962833 chr12:69962837 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_125570 0 0 2 BUD13 POSTAR2 ENCODE chr12:69962774-69962854
64251 chr14 73566094 73566094 1 + C T UCEC 73566093 + 73566073 73566113 41 TGGATTTTTTCACAGATTTTCCGCAGATTTCCAGTGGCCCC TGGATTTTTTCACAGATTTTCTGCAGATTTCCAGTGGCCCC < 41bp 0.456553252678022 0.708185322385879 0.29384068 0.18700457 prediction 0.416370644771757 Functional Gain - RBM25 ENSG00000119707 CDS Human protein_coding chr14:73566093 chr14:73566094 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_125571 0 0 12 TARDBP POSTAR2 DRA001158,DRS012387 chr14:73566060-73566210
64251 chr1 90398846 90398846 1 + C T rs17130932 90398845 + 90398825 90398865 41 ACATACACCACCAGGAAATGCCGAGGTCACCACCAACATCC ACATACACCACCAGGAAATGCTGAGGTCACCACCAACATCC < 41bp 0.576183050438165 0.784361563781929 0.1298998 0.3887483 prediction 0.416357026687529 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90398845 chr1:90398846 synonymous SNV . 0 22 hm5C_associated_SNPs_125573 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:90398839-90398870
64251 chr13 27844847 27844847 1 + C G rs539134049 27844843 + 27844823 27844863 41 CTCGGCGATAGTCAGCTCCGCGGCCTCTGCTCCCGCCCCTC CTCGGCGATAGTCAGCTCCGCGGCGTCTGCTCCCGCCCCTC < 41bp 0.626348014061582 0.834524885368389 0.7233083 0.89597476 prediction 0.416353742613615 Functional Gain - RASL11A ENSG00000122035 UTR5 Human protein_coding chr13:27844843 chr13:27844847 . . 0 25 hm5C_associated_SNPs_125574 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr13:27844828-27844847
64251 chr7 140386944 140386944 1 + T C LIHC 140386941 + 140386921 140386961 41 CGTGCCATCTTCCCTCTGCCCGCTGCGACTGGTGCTGCTGG CGTGCCATCTTCCCTCTGCCCGCCGCGACTGGTGCTGCTGG < 41bp 0.554030391461508 0.762201553655587 0.26237452 0.13640451 prediction 0.416342324388157 Functional Gain - ADCK2 ENSG00000133597 CDS Human protein_coding chr7:140386941 chr7:140386944 nonsynonymous SNV 0.675 1 24 hm5C_associated_SNPs_125577 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:140386915-140386951
64251 chr13 98086995 98086995 1 + C T BRCA 98086994 + 98086974 98087014 41 CTCGTCAACCAGCAGAGCTTCCAGGACATCAAGCCCATGCG CTCGTCAACCAGCAGAGCTTCTAGGACATCAAGCCCATGCG < 41bp 0.468297328776702 0.708169311129161 0.73462284 0.28522682 prediction 0.416338622258323 Functional Gain - RAP2A ENSG00000125249 CDS Human protein_coding chr13:98086994 chr13:98086995 stopgain 0.999 1 22 hm5C_associated_SNPs_125579 0 0 3 GRWD1 POSTAR2 ENCODE chr13:98086931-98087074
64251 chr11 73964914 73964914 1 + C T rs181636068 73964913 + 73964893 73964933 41 ATCTGAGTTCAAATGTCTTCCCAGGCTCAGGGACCTCCATT ATCTGAGTTCAAATGTCTTCCTAGGCTCAGGGACCTCCATT < 41bp 0.529362946508157 0.737529287142979 0.36717662 0.26581812 prediction 0.416332681269645 Functional Gain - PPME1 ENSG00000214517 UTR3 Human protein_coding chr11:73964913 chr11:73964914 . . 0 22 hm5C_associated_SNPs_125580 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012389 chr11:73964902-73964941
64251 chr12 113818599 113818599 1 + C T rs78496923 113818598 + 113818578 113818618 41 GCTGGTCTTCTCCTCCTACCCCGGCACCATCTTCTCCTGCG GCTGGTCTTCTCCTCCTACCCTGGCACCATCTTCTCCTGCG < 41bp 0.606140630862513 0.814306847368058 0.33364725 0.22887269 prediction 0.416332433011091 Functional Gain - PLBD2 ENSG00000151176 CDS Human protein_coding chr12:113818598 chr12:113818599 synonymous SNV . 0 22 hm5C_associated_SNPs_125581 0 0 5 METTL3 POSTAR2 GSE46705,GSM1135006 chr12:113818582-113818615
64251 chr9 130868647 130868647 1 + A G UCEC 130868644 + 130868624 130868664 41 TTGTGCAGGTCCTGAAGACCCGGATGGCGCTGCGGAAGACA TTGTGCAGGTCCTGAAGACCCGGGTGGCGCTGCGGAAGACA < 41bp 0.615544472542904 0.823707150017786 0.6302787 0.86951566 prediction 0.416325354949764 Functional Gain - SLC25A25 ENSG00000148339 CDS Human protein_coding chr9:130868644 chr9:130868647 nonsynonymous SNV 0.996 2 24 hm5C_associated_SNPs_125582 0 0 7 BUD13 POSTAR2 ENCODE chr9:130868627-130868681
64251 chr2 24222630 24222630 1 + A G UCEC 24222627 + 24222607 24222647 41 TGGCAACAGCTCTTCCTGTCCTCAGGTTGCTAGATGAGACA TGGCAACAGCTCTTCCTGTCCTCGGGTTGCTAGATGAGACA < 41bp 0.574337074835334 0.782498339450881 0.06219533 0.09794164 prediction 0.416322529231093 Functional Gain - UBXN2A ENSG00000173960 CDS Human protein_coding chr2:24222627 chr2:24222630 nonsynonymous SNV 0.924 1 24 hm5C_associated_SNPs_125583 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr2:24222618-24222644
64251 chr8 68028220 68028220 1 + A G UCEC 68028217 + 68028197 68028237 41 ATGATACCACCTGAAAGACCCAGAATAGCTTTCCAGACACC ATGATACCACCTGAAAGACCCAGGATAGCTTTCCAGACACC < 41bp 0.471957761522735 0.708160704759226 0.36027163 0.8600958 prediction 0.416321409518453 Functional Gain - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68028217 chr8:68028220 synonymous SNV . 0 24 hm5C_associated_SNPs_125584 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:68028145-68028222
64251 chr19 58153100 58153100 1 + C T HNSC 58153099 + 58153079 58153119 41 AGCTCCAGCCTCATTCACCACCGGAGACTTCACACTGGAGA AGCTCCAGCCTCATTCACCACTGGAGACTTCACACTGGAGA < 41bp 0.609632827509203 0.817782502677118 0.5579753 0.37833655 prediction 0.41629935033583 Functional Gain - ZNF211 ENSG00000121417 CDS Human protein_coding chr19:58153099 chr19:58153100 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_125591 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:58153087-58153115
64251 chr11 70281282 70281282 1 + C A rs112108792 70281281 + 70281261 70281301 41 GGCAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCTGG GGCAGTAGGGCCCCCAGCCCCACCCCGGAGCTGCGCCCTGG < 41bp 0.458603588072545 0.708146141292713 0.08123317 0.16438267 prediction 0.416292282585427 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281281 chr11:70281282 . . 0 22 hm5C_associated_SNPs_125593 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr5 172261404 172261404 1 + C T rs529783894 172261403 + 172261383 172261423 41 GGCCTGCAGCGCTCCCACCCCCGGCGGCGGCACGATGCCCT GGCCTGCAGCGCTCCCACCCCTGGCGGCGGCACGATGCCCT < 41bp 0.528729395611496 0.736870528958752 0.7330749 0.35434425 prediction 0.416282266694511 Functional Gain - ERGIC1 ENSG00000113719 UTR5 Human protein_coding chr5:172261403 chr5:172261404 . . 0 22 hm5C_associated_SNPs_125595 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:172261360-172261420
64251 chr16 14989626 14989626 1 + C T rs554946974 14989625 + 14989605 14989645 41 TTCAGCCTGTGCTGCTGGGCCCGCACCCCATGTCCCTTGTC TTCAGCCTGTGCTGCTGGGCCTGCACCCCATGTCCCTTGTC < 41bp 0.559840614316393 0.767974523451622 0.021744728 0.053499043 prediction 0.416267818270458 Functional Gain - NOMO1 ENSG00000103512 UTR3 Human protein_coding chr16:14989625 chr16:14989626 . . 0 22 hm5C_associated_SNPs_125597 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:14987020-14989843
64251 chr7 36194769 36194769 1 + C T SKCM 36194768 + 36194748 36194788 41 CCGTGGAGAAGGCCAACAACCCCGGGGTGCGAGAGGTGGTG CCGTGGAGAAGGCCAACAACCTCGGGGTGCGAGAGGTGGTG < 41bp 0.623545611874404 0.831673774611298 0.43058673 0.67749715 prediction 0.416256325473788 Functional Gain - EEPD1 ENSG00000122547 CDS Human protein_coding chr7:36194768 chr7:36194769 nonsynonymous SNV 0.896 4 22 hm5C_associated_SNPs_125600 0 0 4 BUD13 POSTAR2 ENCODE chr7:36194742-36194812
64251 chr15 73590826 73590826 1 + A G LUSC 73590823 + 73590803 73590843 41 CCCAAGAGGAAGATTCAGGCCAGAGTCTTCCCACTGCCCAT CCCAAGAGGAAGATTCAGGCCAGGGTCTTCCCACTGCCCAT < 41bp 0.463337111654258 0.708119042083934 0.17648354 0.52162564 prediction 0.416238084167868 Functional Gain - NEO1 ENSG00000067141 CDS Human protein_coding chr15:73590823 chr15:73590826 nonsynonymous SNV 0.863 0 24 hm5C_associated_SNPs_125605 0 0 2 IGF2BP1 POSTAR2 ENCODE chr15:73590807-73590922
64251 chr5 169446041 169446041 1 + C T SARC 169446040 + 169446020 169446060 41 CTTATCCCTGAGGCTGAGCTCCGGAAAGCCACCATACCAAT CTTATCCCTGAGGCTGAGCTCTGGAAAGCCACCATACCAAT < 41bp 0.466749693323483 0.708116552208725 0.2521746 0.14920783 prediction 0.41623310441745 Functional Gain - DOCK2 ENSG00000134516 CDS Human protein_coding chr5:169446040 chr5:169446041 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_125607 1 0 1 FXR2 POSTAR2 ENCODE chr5:169446011-169446062
64251 chr11 8124018 8124018 1 + C G rs78586729 8124014 + 8123994 8124034 41 CCCAGGAGCTCTCTGCTGAGCAGCCCAGCACAACCCCCAGG CCCAGGAGCTCTCTGCTGAGCAGCGCAGCACAACCCCCAGG < 41bp 0.392192742203764 0.708112895907704 0.14044598 0.24918109 prediction 0.416225791815408 Functional Gain - TUB ENSG00000166402 UTR3 Human protein_coding chr11:8124014 chr11:8124018 . . 0 25 hm5C_associated_SNPs_125609 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:8124001-8124033
64251 chr9 130982486 130982486 1 + C A LUAD 130982485 + 130982465 130982505 41 ATTGGAGTGGTGAACCGGAGCCAGAAGGACATTGATGGCAA ATTGGAGTGGTGAACCGGAGCAAGAAGGACATTGATGGCAA < 41bp 0.630090630108906 0.838203169105226 0.7179978 0.79204667 prediction 0.41622507799264 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:130982485 chr9:130982486 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_125610 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:130982462-130982493
64251 chr1 1558792 1558792 1 + T C rs12755088 1558790 + 1558770 1558810 41 TCCCGAGCAGCCCGGCCCACCATGGACCCCTCTGCCCACAG TCCCGAGCAGCCCGGCCCACCACGGACCCCTCTGCCCACAG < 41bp 0.577599508449228 0.785707533032052 0.14998847 0.20680654 prediction 0.416216049165649 Functional Gain - MIB2 ENSG00000197530 CDS Human protein_coding chr1:1558790 chr1:1558792 nonsynonymous SNV 0.002 0 23 hm5C_associated_SNPs_125612 0 0 2 BUD13 POSTAR2 ENCODE chr1:1558779-1558859
64251 chr15 76225720 76225720 1 + T C rs17428029 76225718 + 76225698 76225738 41 ATCATGTAGCTGCTGTGTAACATGACCTTAAATAGTCTTCC ATCATGTAGCTGCTGTGTAACACGACCTTAAATAGTCTTCC < 41bp 0.613325132467773 0.821425872785781 0.050475657 0.02848047 prediction 0.416201480636016 Functional Gain - FBXO22 ENSG00000167196 UTR3 Human protein_coding chr15:76225718 chr15:76225720 . . 0 23 hm5C_associated_SNPs_125615 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:76225573-76225741
64251 chr19 10226051 10226051 1 + C A rs371268998 10226050 + 10226030 10226070 41 GACTGTCCCCTCAAAACCAGCCGGGGGACTGTTAAATTGGC GACTGTCCCCTCAAAACCAGCAGGGGGACTGTTAAATTGGC < 41bp 0.48065223862867 0.708087330202702 0.77912414 0.8862497 prediction 0.416174660405404 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130811 intronic Human protein_coding chr19:10226050 chr19:10226051 . . 0 22 hm5C_associated_SNPs_125622 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:10226041-10226077
64251 chr9 114695129 114695129 1 + A G SKCM 114695126 + 114695106 114695146 41 GGGTGGCACACTGTGTTTTTCAAAACTTGATTATGCAGTCG GGGTGGCACACTGTGTTTTTCAAGACTTGATTATGCAGTCG < 41bp 0.577730454262801 0.785816780685596 0.22242132 0.4460215 prediction 0.416172652845588 Functional Gain - UGCG ENSG00000148154 CDS Human protein_coding chr9:114695126 chr9:114695129 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125623 0 0 12 ZC3H7B POSTAR2 GSE38201,GSM936510 chr9:114695111-114695134
64251 chr22 42032532 42032532 1 + T G UCEC 42032528 + 42032508 42032548 41 GCCTCTGATCAGGTGCAAAACGAATTCTAGAGCTTGACCAG GCCTCTGATCAGGTGCAAAACGAAGTCTAGAGCTTGACCAG < 41bp 0.502007673637467 0.710088508519681 0.0796797 0.7471063 prediction 0.416161669764428 Functional Gain - XRCC6 ENSG00000196419 CDS Human protein_coding chr22:42032528 chr22:42032532 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_125624 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350200 chr22:42032516-42032558
64251 chr1 117910814 117910814 1 + C T LGG 117910813 + 117910793 117910833 41 AAGAGCGTAAACGATGACTACCCCAGCCCTGCTGCCCCTCT AAGAGCGTAAACGATGACTACTCCAGCCCTGCTGCCCCTCT < 41bp 0.449561146599676 0.708079700278758 0.033428967 0.9333354 prediction 0.416159400557515 Functional Gain - MAN1A2 ENSG00000198162 CDS Human protein_coding chr1:117910813 chr1:117910814 synonymous SNV . 0 22 hm5C_associated_SNPs_125626 0 0 8 CPSF3 POSTAR2 GSE37401,GSM917668 chr1:117910797-117910822
64251 chr2 122519089 122519089 1 + A G UCEC 122519086 + 122519066 122519106 41 AGTGACTCGAGAAGCAGTTACAGAAATTCTTGGCAGTAAGT AGTGACTCGAGAAGCAGTTACAGGAATTCTTGGCAGTAAGT < 41bp 0.472174682856722 0.70806875814195 0.70018613 0.91253483 prediction 0.4161375162839 Functional Gain - TSN ENSG00000211460 CDS Human protein_coding chr2:122519086 chr2:122519089 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125628 0 0 3 EIF3G POSTAR2 GSE65004,GSM1585673 chr2:122519061-122519090
64251 chr11 117061419 117061419 1 + C A SKCM 117061415 + 117061395 117061435 41 GATGGAGGGGCTGCTCAGTGCTTGCTATCATGTGTGCCCCA GATGGAGGGGCTGCTCAGTGCTTGATATCATGTGTGCCCCA < 41bp 0.284384750060065 0.708049404638398 0.053046167 0.073207766 prediction 0.416098809276797 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117061415 chr11:117061419 stopgain 0.987 1 25 hm5C_associated_SNPs_125636 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:117061399-117061426
64251 chr1 229773632 229773632 1 + T G COAD 229773628 + 229773608 229773648 41 CACTGTCTGAGCTGCTGCAGCAGGTTGTGCTGCAGACAGGA CACTGTCTGAGCTGCTGCAGCAGGGTGTGCTGCAGACAGGA < 41bp 0.522630900898173 0.73067506660817 0.5676963 0.88923013 prediction 0.416088331419994 Functional Gain - URB2 ENSG00000135763 CDS Human protein_coding chr1:229773628 chr1:229773632 nonsynonymous SNV 0.171 1 25 hm5C_associated_SNPs_125637 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:229773616-229773648
64251 chr7 76054467 76054467 1 + C T rs115350845 76054466 + 76054446 76054486 41 CAGCAAAGACCTTTTTGGCACCGGGAAGCTCATCAGGGCTG CAGCAAAGACCTTTTTGGCACTGGGAAGCTCATCAGGGCTG < 41bp 0.551793762512875 0.759835862371457 0.55451554 0.621783 prediction 0.416084199717164 Functional Gain - ZP3 ENSG00000188372 CDS Human protein_coding chr7:76054466 chr7:76054467 synonymous SNV . 0 22 hm5C_associated_SNPs_125639 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:76054449-76054470
64251 chr16 67914702 67914702 1 + C T SARC 67914701 + 67914681 67914721 41 CTCGGCACTGCACCTGCTGTCCCCACGGCCCCGGCCAGGGC CTCGGCACTGCACCTGCTGTCTCCACGGCCCCGGCCAGGGC < 41bp 0.651959719522537 0.859992757171826 0.2873268 0.9686693 prediction 0.416066075298577 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914701 chr16:67914702 synonymous SNV . 0 22 hm5C_associated_SNPs_125642 0 0 3 FMR1 POSTAR2 ENCODE chr16:67914665-67914705
64251 chr1 158064599 158064599 1 + C T HNSC 158064598 + 158064578 158064618 41 GCCCAGCTCAACACCTATAGCCGGGGCCCTGCCTCTGACTA GCCCAGCTCAACACCTATAGCTGGGGCCCTGCCTCTGACTA < 41bp 0.597173965023286 0.805203301986685 0.9341496 0.82138145 prediction 0.416058673926798 Functional Gain - KIRREL ENSG00000183853 CDS Human protein_coding chr1:158064598 chr1:158064599 nonsynonymous SNV 0.683 3 22 hm5C_associated_SNPs_125643 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:158064570-158064664
64251 chr2 7160637 7160637 1 + C T OV 7160636 + 7160616 7160656 41 ATCCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCT ATCCCTGTCGGACTTGGTGCCTGGCGTCCACCTGCCAAGCT < 41bp 0.458079073751511 0.708029171989961 0.8704257 0.6026529 prediction 0.416058343979922 Functional Gain - RNF144A ENSG00000151692 CDS Human protein_coding chr2:7160636 chr2:7160637 nonsynonymous SNV 0.965 4 22 hm5C_associated_SNPs_125644 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:7160603-7160638
64251 chr3 45637765 45637765 1 + A G rs114236922 45637762 + 45637742 45637782 41 GCGAGAGATGGATGCTCACCCGAAGGCTGATTACTTTGGTG GCGAGAGATGGATGCTCACCCGAGGGCTGATTACTTTGGTG < 41bp 0.456485866504585 0.708015390740795 0.70299757 0.90623224 prediction 0.41603078148159 Functional Gain - LIMD1 ENSG00000144791 CDS Human protein_coding chr3:45637762 chr3:45637765 nonsynonymous SNV 0.983 1 24 hm5C_associated_SNPs_125651 0 0 3 BUD13 POSTAR2 ENCODE chr3:45637715-45637785
64251 chr3 93758757 93758757 1 + T G STAD 93758754 + 93758734 93758774 41 GAACAGGAGCAGGCTGAACTCGATGGAACCAGTGGTCTGGC GAACAGGAGCAGGCTGAACTCGAGGGAACCAGTGGTCTGGC < 41bp 0.722523132283441 0.930538508904725 0.84093523 0.9438019 prediction 0.416030753242569 Functional Gain - ARL13B ENSG00000169379 CDS Human protein_coding chr3:93758754 chr3:93758757 nonsynonymous SNV 0.099 0 24 hm5C_associated_SNPs_125652 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:93758730-93758771
64251 chr8 11660635 11660635 1 + C A rs371572514 11660631 + 11660611 11660651 41 ACGCGGCCGTCCTGGCTGACCTGTCCCTGCCCCCGCAAGCC ACGCGGCCGTCCTGGCTGACCTGTACCTGCCCCCGCAAGCC < 41bp 0.363419148233464 0.708013098989323 0.13151023 0.20718 prediction 0.416026197978646 Functional Gain - FDFT1 ENSG00000079459 UTR5 Human protein_coding chr8:11660631 chr8:11660635 . . 0 25 hm5C_associated_SNPs_125656 0 0 7 EFTUD2 POSTAR2 ENCODE chr8:11660548-11660643
64251 chr1 110256348 110256348 1 + A G CESC 110256345 + 110256325 110256365 41 AGAACCAGGTTATGGATAACCACATGGAGCTGGTCAGACTG AGAACCAGGTTATGGATAACCACGTGGAGCTGGTCAGACTG < 41bp 0.587093012518471 0.79510547443846 0.90563446 0.8303045 prediction 0.416024923839977 Functional Gain - GSTM5 ENSG00000134201 CDS Human protein_coding chr1:110256345 chr1:110256348 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_125657 0 0 1 DGCR8 POSTAR2 ENCODE chr1:110256343-110256384
64251 chr7 29915557 29915557 1 + C A SARC 29915553 + 29915533 29915573 41 CGCAAAGTCACGCAGATCAACGACCGCAGTGCCCCGCAGAT CGCAAAGTCACGCAGATCAACGACAGCAGTGCCCCGCAGAT < 41bp 0.27723929853371 0.708007165712 0.12635657 0.17815891 prediction 0.416014331423999 Functional Gain - WIPF3 ENSG00000122574 CDS Human protein_coding chr7:29915553 chr7:29915557 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_125662 0 0 1 YBX3 POSTAR2 ENCODE chr7:29915542-29915579
64251 chr11 605710 605710 1 + C T COAD 605709 + 605689 605729 41 GCCCGTGGCCAGGCCCGTCTCCGTGGGGCTTTCCAGGTGTG GCCCGTGGCCAGGCCCGTCTCTGTGGGGCTTTCCAGGTGTG < 41bp 0.468225362590201 0.708001274169798 0.86378443 0.3394301 prediction 0.416002548339596 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:605709 chr11:605710 synonymous SNV . 0 22 hm5C_associated_SNPs_125665 0 0 2 PRPF8 POSTAR2 ENCODE chr11:605683-605773
64251 chr3 37035032 37035032 1 + C A rs104894994 37035028 + 37035008 37035048 41 TAGACGTTTCCTTGGCTCTTCTGGCGCCAAAATGTCGTTCG TAGACGTTTCCTTGGCTCTTCTGGAGCCAAAATGTCGTTCG < 41bp 0.583747225362636 0.791746414809342 0.5656359 0.84988916 prediction 0.415998378893413 Functional Gain - MLH1 ENSG00000076242 UTR5 Human protein_coding chr3:37035028 chr3:37035032 . . 0 25 hm5C_associated_SNPs_125666 0 0 2 DDX3X POSTAR2 ENCODE chr3:37035027-37035147
64251 chr8 38948816 38948816 1 + C T rs144750648 38948815 + 38948795 38948835 41 AAGCAAACCCTTCTAGACAGCCGGGGAGTGTTCCTCGACAT AAGCAAACCCTTCTAGACAGCTGGGGAGTGTTCCTCGACAT < 41bp 0.599720517352763 0.807719643998287 0.4361239 0.18741876 prediction 0.415998253291049 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38948815 chr8:38948816 nonsynonymous SNV 0.800 2 22 hm5C_associated_SNPs_125667 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr8:38948800-38948820
64251 chr19 994313 994313 1 + C T UCEC 994312 + 994292 994332 41 TCGGGACCTGTTCGACTTCTCCACGCGCTTCATCACGCGGC TCGGGACCTGTTCGACTTCTCTACGCGCTTCATCACGCGGC < 41bp 0.592517019169879 0.800512815216584 0.5979627 0.6550743 prediction 0.41599159209341 Functional Gain - WDR18 ENSG00000065268 CDS Human protein_coding chr19:994312 chr19:994313 synonymous SNV . 0 22 hm5C_associated_SNPs_125669 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:994286-994316
64251 chr16 3707329 3707329 1 + T C UCEC 3707326 + 3707306 3707346 41 ACACCACAGCTACACCCACGCACTGTGCCTATGACAGGTGA ACACCACAGCTACACCCACGCACCGTGCCTATGACAGGTGA < 41bp 0.525371957362826 0.733364655188889 0.6790358 0.37516016 prediction 0.415985395652126 Functional Gain - DNASE1 ENSG00000213918 CDS Human protein_coding chr16:3707326 chr16:3707329 nonsynonymous SNV 0.260 4 24 hm5C_associated_SNPs_125672 0 0 1 PPIG POSTAR2 ENCODE chr16:3707240-3707338
64251 chr17 46134798 46134798 1 + C T rs2229368 46134797 + 46134777 46134817 41 CCTCTTGTCTCCTCTTCTGACCGGGACAGAGTCACCATTTG CCTCTTGTCTCCTCTTCTGACTGGGACAGAGTCACCATTTG < 41bp 0.454669782629504 0.707991558737098 0.8144677 0.24624518 prediction 0.415983117474195 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46134797 chr17:46134798 synonymous SNV . 0 22 hm5C_associated_SNPs_125673 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:46134778-46134851
64251 chr16 22019639 22019639 1 + T C UCEC 22019637 + 22019617 22019657 41 GGGGAGATGGATAAACTGACCATCATCTCAGGATGTCTCTT GGGGAGATGGATAAACTGACCACCATCTCAGGATGTCTCTT < 41bp 0.637968451976597 0.845955777241055 0.19546804 0.11494109 prediction 0.415974650528916 Functional Gain - C16orf52 ENSG00000185716 CDS Human protein_coding chr16:22019637 chr16:22019639 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_125675 0 0 10 CSTF2T POSTAR2 ENCODE chr16:22019606-22019641
64251 chr1 6692528 6692528 1 + C T ESCA 6692527 + 6692507 6692547 41 ACTTGAAGAGCTTCAGTTGCCCCCAAATGCCGAAGGCCACG ACTTGAAGAGCTTCAGTTGCCTCCAAATGCCGAAGGCCACG < 41bp 0.610735446442798 0.818721461256328 0.24518952 0.9566105 prediction 0.415972029627059 Functional Gain - THAP3 ENSG00000041988 CDS Human protein_coding chr1:6692527 chr1:6692528 synonymous SNV . 0 22 hm5C_associated_SNPs_125676 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:6692495-6692531
64251 chr2 219266430 219266430 1 + C T SKCM 219266429 + 219266409 219266449 41 GTGGAGGAGAATGGCGCCATCCCTAAGGTGCGTGGGGGCCA GTGGAGGAGAATGGCGCCATCTCTAAGGTGCGTGGGGGCCA < 41bp 0.624365270083605 0.832347876347702 0.32268655 0.90881205 prediction 0.415965212528195 Functional Gain - CTDSP1 ENSG00000144579 CDS Human protein_coding chr2:219266429 chr2:219266430 nonsynonymous SNV 0.876 1 22 hm5C_associated_SNPs_125677 0 0 4 BUD13 POSTAR2 ENCODE chr2:219266418-219266486
64251 chr1 114524236 114524236 1 + A G UCEC 114524233 + 114524213 114524253 41 CCTTTGATGCCAGCGGCACCCTGACCCCTGAACGGGCAGCA CCTTTGATGCCAGCGGCACCCTGGCCCCTGAACGGGCAGCA < 41bp 0.608021454149831 0.816003984084324 0.13078293 0.31035584 prediction 0.415965059868986 Functional Gain - OLFML3 ENSG00000116774 CDS Human protein_coding chr1:114524233 chr1:114524236 nonsynonymous SNV 0.369 1 24 hm5C_associated_SNPs_125678 0 0 1 SND1 POSTAR2 ENCODE chr1:114524179-114524263
64251 chr2 219449404 219449404 1 + T A COAD 219449400 + 219449380 219449420 41 TTTGCACACTGTCAGCAAAACACGTCCCTTTGAGTATCTCC TTTGCACACTGTCAGCAAAACACGACCCTTTGAGTATCTCC < 41bp 0.367095100572021 0.707968447695383 0.169204 0.09981313 prediction 0.415936895390766 Functional Gain - CNOT9 ENSG00000144580 CDS Human protein_coding chr2:219449400 chr2:219449404 synonymous SNV . 0 25 hm5C_associated_SNPs_125684 0 0 5 WDR33 POSTAR2 GSE61123,GSM1496985 chr2:219449372-219449411
64251 chr1 29069683 29069683 1 + C T COAD 29069682 + 29069662 29069702 41 CAGAATATAGGTCAGCCAACCCAGGGGTCTCCTCAGCCTGT CAGAATATAGGTCAGCCAACCTAGGGGTCTCCTCAGCCTGT < 41bp 0.457620060286089 0.707965737456754 0.9110391 0.846233 prediction 0.415931474913509 Functional Gain - YTHDF2 ENSG00000198492 CDS Human protein_coding chr1:29069682 chr1:29069683 stopgain 1.000 0 22 hm5C_associated_SNPs_125685 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:29069660-29069700
64251 chr4 56277929 56277929 1 + T C KIRC 56277927 + 56277907 56277947 41 AAGACATTTTTTATAGCAGCCATCATGGCAATGCGCTATAA AAGACATTTTTTATAGCAGCCACCATGGCAATGCGCTATAA < 41bp 0.405124373422403 0.707959976369079 0.26290572 0.12884405 prediction 0.415919952738158 Functional Gain - TMEM165 ENSG00000134851 CDS Human protein_coding chr4:56277927 chr4:56277929 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_125688 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr4:56277856-56277935
64251 chr16 3703881 3703881 1 + C A rs79356805 3703880 + 3703860 3703900 41 CACCTGTGGTCCTGGCTACGCCGGAGGATTGCCTGAAGCCA CACCTGTGGTCCTGGCTACGCAGGAGGATTGCCTGAAGCCA < 41bp 0.592065187433517 0.80001551508482 0.6674502 0.88257945 prediction 0.415900655302605 Functional Gain - DNASE1 ENSG00000213918 UTR5 Human protein_coding chr16:3703880 chr16:3703881 . . 0 22 hm5C_associated_SNPs_125689 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:3703858-3703887
64251 chr13 113571513 113571513 1 + C A rs549115559 113571512 + 113571492 113571532 41 CTCCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGC CTCCAGTCCGGACCCCTCCCCAGGGCACTGCACCGCCCTGC < 41bp 0.611000091517353 0.818946514771529 0.93234694 0.93901736 prediction 0.415892846508351 Functional Gain - ATP11A;MCF2L-AS1 ENSG00000126217 UTR3 Human protein_coding chr13:113571512 chr13:113571513 . . 0 22 hm5C_associated_SNPs_125690 0 0 1 HNRNPK POSTAR2 ENCODE chr13:113571493-113571549
64251 chr12 53453445 53453445 1 + C A UCEC 53453441 + 53453421 53453461 41 TTTGGCTACCGCGCCCCAGGCTACCGGGAGGTGGTCATCCT TTTGGCTACCGCGCCCCAGGCTACAGGGAGGTGGTCATCCT < 41bp 0.275851711764473 0.707945799445618 0.1357238 0.5369435 prediction 0.415891598891236 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53453441 chr12:53453445 synonymous SNV . 0 25 hm5C_associated_SNPs_125691 0 0 6 EFTUD2 POSTAR2 ENCODE chr12:53453436-53453511
64251 chr19 12924222 12924222 1 + C T SKCM 12924221 + 12924201 12924241 41 ATGAAGGGTCCCAAGCCCGTCCCCGTTCTTCCCACCGATAT ATGAAGGGTCCCAAGCCCGTCTCCGTTCTTCCCACCGATAT < 41bp 0.448822633639034 0.707940614732931 0.16327709 0.30750018 prediction 0.415881229465862 Functional Gain - RNASEH2A ENSG00000104889 CDS Human protein_coding chr19:12924221 chr19:12924222 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_125693 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:12924171-12924237
64251 chr3 66431156 66431156 1 - G A COAD 66431157 - 66431137 66431177 41 GTGCGCCAAATGGCCCGGAGCCGGGTGGGAGTGACCAAGAG GTGCGCCAAATGGCCCGGAGCTGGGTGGGAGTGACCAAGAG < 41bp 0.60122481519108 0.809164591746255 0.74797 0.3782013 prediction 0.415879553110351 Functional Gain - LRIG1 ENSG00000144749 CDS Human protein_coding chr3:66431157 chr3:66431156 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_125694 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:66431107-66431159
64251 chr6 76602328 76602328 1 + C T HNSC 76602327 + 76602307 76602347 41 CTGGAGCAGGAGCGCAGGGACCGGGAGCTGGCCCTGAGGAT CTGGAGCAGGAGCGCAGGGACTGGGAGCTGGCCCTGAGGAT < 41bp 0.464301511983683 0.707935444993396 0.857375 0.4860291 prediction 0.415870889986793 Functional Gain - MYO6 ENSG00000196586 CDS Human protein_coding chr6:76602327 chr6:76602328 nonsynonymous SNV 0.991 3 22 hm5C_associated_SNPs_125697 0 0 9 BUD13 POSTAR2 ENCODE chr6:76602250-76602429
64251 chr19 8429391 8429391 1 + C T rs139991923 8429390 + 8429370 8429410 41 GCGCGAACACGCGGAGCGCACCCGCAGTCAGCTGAGCGCGC GCGCGAACACGCGGAGCGCACTCGCAGTCAGCTGAGCGCGC < 41bp 0.577994454956636 0.785925336461377 0.2628672 0.29309994 prediction 0.415861763009483 Functional Gain - ANGPTL4 ENSG00000167772 CDS Human protein_coding chr19:8429390 chr19:8429391 synonymous SNV . 0 22 hm5C_associated_SNPs_125700 0 0 1 RPS3 POSTAR2 ENCODE chr19:8429380-8429463
64251 chr19 50099086 50099086 1 + C T SKCM 50099085 + 50099065 50099105 41 GGCCACATGTCAGAGCTACTCCCCGGACCAGCTGCAGGGGC GGCCACATGTCAGAGCTACTCTCCGGACCAGCTGCAGGGGC < 41bp 0.599396230877326 0.807327001823491 0.25691652 0.8430611 prediction 0.41586154189233 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50099085 chr19:50099086 synonymous SNV . 0 22 hm5C_associated_SNPs_125701 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:50099075-50099101
64251 chr22 30163396 30163396 1 + C T OV 30163395 + 30163375 30163415 41 ACTGTGAAGAAACATGGCGGCCGCGACGTTGACTTCGAAAT ACTGTGAAGAAACATGGCGGCTGCGACGTTGACTTCGAAAT < 41bp 0.527052411369404 0.734952023617095 0.08688739 0.07995728 prediction 0.415799224495383 Functional Gain - UQCR10 ENSG00000184076 CDS Human protein_coding chr22:30163395 chr22:30163396 synonymous SNV . 0 22 hm5C_associated_SNPs_125718 0 0 31 DDX3X POSTAR2 GSE70804,GSM1819209 chr22:30163360-30163400
64251 chr4 177032838 177032838 1 + C A COAD 177032834 + 177032814 177032854 41 GGTTTGCATATTGTGCGACCCTGGCTATCTATATTTATCAG GGTTTGCATATTGTGCGACCCTGGATATCTATATTTATCAG < 41bp 0.306434640990546 0.7078916965317 0.053979635 0.15070796 prediction 0.4157833930634 Functional Gain - WDR17 ENSG00000150627 CDS Human protein_coding chr4:177032834 chr4:177032838 nonsynonymous SNV 0.963 4 25 hm5C_associated_SNPs_125722 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:177032796-177032839
64251 chr12 65088709 65088709 1 + C A rs73323421 65088708 + 65088688 65088728 41 ATTAAAGCGGGGCTCCCTGCCCGTGAGGCCCGGTGCAGGAC ATTAAAGCGGGGCTCCCTGCCAGTGAGGCCCGGTGCAGGAC < 41bp 0.632643968585798 0.840523629178062 0.06678969 0.24721843 prediction 0.415759321184529 Functional Gain - RASSF3 ENSG00000153179 UTR3 Human protein_coding chr12:65088708 chr12:65088709 . . 0 22 hm5C_associated_SNPs_125727 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:65088680-65088714
64251 chr15 34517785 34517785 1 + C A UCEC 34517781 + 34517761 34517801 41 CCAGGGAGACTCGCTCTACCCAGTCGGTTACTTGGACAAGC CCAGGGAGACTCGCTCTACCCAGTAGGTTACTTGGACAAGC < 41bp 0.728611039024844 0.936482462108011 0.4265999 0.6374393 prediction 0.415742846166336 Functional Gain - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34517781 chr15:34517785 stopgain . 0 25 hm5C_associated_SNPs_125729 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:34517771-34517820
64251 chrX 65409665 65409665 1 + T A LUSC 65409663 + 65409643 65409683 41 ATGGACAGATGCTGACTACCCGTGGACACCACACTGATGTG ATGGACAGATGCTGACTACCCGAGGACACCACACTGATGTG < 41bp 0.542408976214013 0.750278096765138 0.29509163 0.8732312 prediction 0.415738241102251 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65409663 chrX:65409665 synonymous SNV . 0 23 hm5C_associated_SNPs_125731 0 0 2 SND1 POSTAR2 ENCODE chrX:65409617-65409679
64251 chr4 78792975 78792975 1 + C T UCEC 78792974 + 78792954 78792994 41 TGTTCTTGTTCTGTAAACATCCGAGTGCCCAACAGACATTT TGTTCTTGTTCTGTAAACATCTGAGTGCCCAACAGACATTT < 41bp 0.472790407877206 0.707859848579325 0.4392367 0.26893288 prediction 0.415719697158651 Functional Gain - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78792974 chr4:78792975 stopgain 0.002 0 22 hm5C_associated_SNPs_125733 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr4:78792948-78792986
64251 chr5 140475671 140475671 1 + C A HNSC 140475667 + 140475647 140475687 41 GTCACCGACTTCGGGACACCCAGGCTGAAAACCGAGCACAA GTCACCGACTTCGGGACACCCAGGATGAAAACCGAGCACAA < 41bp 0.727016422004006 0.934872723766658 0.8666903 0.9182974 prediction 0.415712603525305 Functional Gain - PCDHB2 ENSG00000112852 CDS Human protein_coding chr5:140475667 chr5:140475671 nonsynonymous SNV 0.499 3 25 hm5C_associated_SNPs_125738 0 0 1 SND1 POSTAR2 ENCODE chr5:140475642-140475679
64251 chr9 990397 990397 1 + C A LUAD 990396 + 990376 990416 41 CCAACGGTGCTTGAGCTCATCCTCAAGGGCTGTGGCGGGGA CCAACGGTGCTTGAGCTCATCATCAAGGGCTGTGGCGGGGA < 41bp 0.44267858786031 0.707856286039044 0.19147515 0.17281869 prediction 0.415712572078088 Functional Gain - DMRT3 ENSG00000064218 CDS Human protein_coding chr9:990396 chr9:990397 nonsynonymous SNV 0.982 4 22 hm5C_associated_SNPs_125739 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:990390-990413
64251 chrX 16738011 16738011 1 + A G UCEC 16738008 + 16737988 16738028 41 CCAGGAGCTCCTCCACCAGGCCAAAGACTTCGGCAGTGAGT CCAGGAGCTCCTCCACCAGGCCAGAGACTTCGGCAGTGAGT < 41bp 0.461689637665166 0.707855446211941 0.684428 0.9339641 prediction 0.415710892423881 Functional Gain - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16738008 chrX:16738011 nonsynonymous SNV 0.971 0 24 hm5C_associated_SNPs_125741 0 0 4 UCHL5 POSTAR2 ENCODE chrX:16737870-16738022
64251 chr1 44436769 44436769 1 + T C UCEC 44436767 + 44436747 44436787 41 CTTCGTCAACGTTCTGTGGCCTTGGAGCTCTGTGTCAAGGC CTTCGTCAACGTTCTGTGGCCTCGGAGCTCTGTGTCAAGGC < 41bp 0.432857231192483 0.707833223143528 0.063639015 0.17301112 prediction 0.415666446287056 Functional Gain - DPH2 ENSG00000132768 CDS Human protein_coding chr1:44436767 chr1:44436769 nonsynonymous SNV 0.778 2 23 hm5C_associated_SNPs_125753 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44436739-44436777
64251 chr1 156027790 156027790 1 + C T COAD 156027789 + 156027769 156027809 41 GAGGGCCGTGTAGCCATCACCCGAGTGGCCAACCTTCTGCT GAGGGCCGTGTAGCCATCACCTGAGTGGCCAACCTTCTGCT < 41bp 0.604763395566308 0.81258409072045 0.9177848 0.8716779 prediction 0.415641390308283 Functional Gain - LAMTOR2 ENSG00000116586 CDS Human protein_coding chr1:156027789 chr1:156027790 stopgain 0.996 1 22 hm5C_associated_SNPs_125760 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:156027778-156027826
64251 chr13 108881820 108881820 1 + C T OV 108881819 + 108881799 108881839 41 TTCCCATGCCCACTGGCATTCCACATGAAAACATTTTCATC TTCCCATGCCCACTGGCATTCTACATGAAAACATTTTCATC < 41bp 0.451568754394603 0.707813001091544 0.06109771 0.8636474 prediction 0.415626002183088 Functional Gain - ABHD13 ENSG00000139826 CDS Human protein_coding chr13:108881819 chr13:108881820 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_125764 0 0 4 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr13:108881800-108881821
64251 chr6 41754013 41754013 1 + C G rs141478229 41754012 + 41753992 41754032 41 TGCCCCAGCTGCTTCGAGAACCGCTACTCGGATGCAGGCTC TGCCCCAGCTGCTTCGAGAACGGCTACTCGGATGCAGGCTC < 41bp 0.390785079042818 0.70780679646509 0.39543626 0.39167905 prediction 0.415613592930179 Functional Gain - PRICKLE4 ENSG00000124593 CDS Human protein_coding chr6:41754012 chr6:41754013 nonsynonymous SNV 0.011 3 22 hm5C_associated_SNPs_125766 0 0 1 EIF3H POSTAR2 ENCODE chr6:41753932-41754060
64251 chr19 4499549 4499549 1 + T G STAD 4499545 + 4499525 4499565 41 AGGCAGCAGAAGTCTATACCCGGCTCAAGTCGCGGGTCCTC AGGCAGCAGAAGTCTATACCCGGCGCAAGTCGCGGGTCCTC < 41bp 0.506787001846745 0.714588059274598 0.89644295 0.9102963 prediction 0.415602114855705 Functional Gain - HDGFL2 ENSG00000167674 CDS Human protein_coding chr19:4499545 chr19:4499549 nonsynonymous SNV 0.923 3 25 hm5C_associated_SNPs_125770 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:4499512-4499549
64251 chr4 6863623 6863623 1 + A G UCEC 6863620 + 6863600 6863640 41 CCTGGATGATATTCATCTATCAGAATTAACGCACTTCTATG CCTGGATGATATTCATCTATCAGGATTAACGCACTTCTATG < 41bp 0.575876140093663 0.783670327018316 0.5310495 0.87986517 prediction 0.415588373849305 Functional Gain - KIAA0232 ENSG00000170871 CDS Human protein_coding chr4:6863620 chr4:6863623 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_125772 0 0 6 MOV10 POSTAR2 GSE37524,GSM921128 chr4:6863607-6863630
64251 chr12 50869512 50869512 1 + A G UCEC 50869509 + 50869489 50869529 41 AGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCCCAG AGTAAGGATTATTCTGGCTTCCGGGGCAATATAATCCCCAG < 41bp 0.525018083152712 0.732810367379913 0.8875743 0.9060699 prediction 0.415584568454402 Functional Gain - LARP4 ENSG00000161813 CDS Human protein_coding chr12:50869509 chr12:50869512 synonymous SNV . 0 24 hm5C_associated_SNPs_125773 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:50869431-50869515
64251 chr9 135555134 135555134 1 + C A THCA 135555130 + 135555110 135555150 41 ACAGAAAACACTAGCATCCCCACCCGCGGACTCTGTAACTT ACAGAAAACACTAGCATCCCCACCAGCGGACTCTGTAACTT < 41bp 0.294928343746773 0.707791917071088 0.031922072 0.039138705 prediction 0.415583834142175 Functional Gain - GTF3C4 ENSG00000125484 CDS Human protein_coding chr9:135555130 chr9:135555134 nonsynonymous SNV 0.705 2 25 hm5C_associated_SNPs_125774 0 0 14 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr9:135555113-135555143
64251 chr8 87568561 87568561 1 + C T LGG 87568560 + 87568540 87568580 41 TTTGTGCCTTTCAGACAGTTCCAGAATGTGAGTACCACTCC TTTGTGCCTTTCAGACAGTTCTAGAATGTGAGTACCACTCC < 41bp 0.623942586698995 0.831734076271912 0.096625 0.0945797 prediction 0.415582979145835 Functional Gain - CPNE3 ENSG00000085719 CDS Human protein_coding chr8:87568560 chr8:87568561 stopgain 1.000 0 22 hm5C_associated_SNPs_125775 0 0 1 LIN28B POSTAR2 ENCODE chr8:87568480-87568566
64251 chr2 203879703 203879703 1 + A G rs540119987 203879700 + 203879680 203879720 41 GCGGCGGCTGCCGCGCGGCACACAATGTGAGCCCGGTGATG GCGGCGGCTGCCGCGCGGCACACGATGTGAGCCCGGTGATG < 41bp 0.552920747079496 0.760708672207632 0.09486857 0.22448158 prediction 0.415575850256273 Functional Gain - NBEAL1 ENSG00000144426 UTR5 Human protein_coding chr2:203879700 chr2:203879703 . . 0 24 hm5C_associated_SNPs_125779 0 0 3 NCBP2 POSTAR2 ENCODE chr2:203879617-203879705
64251 chrX 65474907 65474907 1 + C A UCEC 65474906 + 65474886 65474926 41 TCACTTATCAGTGGAACATCCCAGAGAGGTCTGGCCCTGGG TCACTTATCAGTGGAACATCCAAGAGAGGTCTGGCCCTGGG < 41bp 0.639190175127191 0.846974902674877 0.3992846 0.6540834 prediction 0.415569455095372 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65474906 chrX:65474907 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_125781 0 0 1 RPS3 POSTAR2 ENCODE chrX:65474901-65474946
64251 chr1 196684741 196684741 1 + T C UCEC 196684738 + 196684718 196684758 41 ACTAGAATCTTGTGATATCCCAGTATTTATGAATGCCAGAA ACTAGAATCTTGTGATATCCCAGCATTTATGAATGCCAGAA < 41bp 0.501447127349921 0.709228245790504 0.0899356 0.07097617 prediction 0.415562236881166 Functional Gain - CFH ENSG00000000971 CDS Human protein_coding chr1:196684738 chr1:196684741 nonsynonymous SNV 0.346 0 24 hm5C_associated_SNPs_125782 0 0 1 SND1 POSTAR2 ENCODE chr1:196684727-196684776
64251 chr2 44599934 44599934 1 + T C GBM 44599931 + 44599911 44599951 41 TGAATCATTTAATCTGTTTTCAGTAACAGAAGGCAAAGAAA TGAATCATTTAATCTGTTTTCAGCAACAGAAGGCAAAGAAA < 41bp 0.489779490774825 0.707780901587344 0.21932268 0.41152155 prediction 0.415561803174688 Functional Gain - CAMKMT ENSG00000143919 CDS Human protein_coding chr2:44599931 chr2:44599934 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_125783 0 0 4 GRWD1 POSTAR2 ENCODE chr2:44599934-44600028
64251 chr1 76260255 76260255 1 + A G HNSC 76260252 + 76260232 76260272 41 TGTCACTTTTGGGAGAAGAACAGATTAAACCTGTTAATCCT TGTCACTTTTGGGAGAAGAACAGGTTAAACCTGTTAATCCT < 41bp 0.554456768693946 0.762235253845891 0.4813144 0.8837879 prediction 0.415556970303891 Functional Gain - RABGGTB ENSG00000137955 CDS Human protein_coding chr1:76260252 chr1:76260255 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_125784 0 0 27 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:76260175-76260274
64251 chr17 58701061 58701061 1 + A G STAD 58701058 + 58701038 58701078 41 CTGTGGAGGTGACACAGGACCATAAGCCAGAACTTCCCAAG CTGTGGAGGTGACACAGGACCATGAGCCAGAACTTCCCAAG < 41bp 0.564102779089982 0.771874730260571 0.06705791 0.13099101 prediction 0.415543902341179 Functional Gain - PPM1D ENSG00000170836 CDS Human protein_coding chr17:58701058 chr17:58701061 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_125789 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:58701007-58701079
64251 chr20 61303264 61303264 1 + C T rs118129127 61303263 + 61303243 61303283 41 TGACCACCGCCCGCGCCCACCCGGCCACGGCGGGCACTCAG TGACCACCGCCCGCGCCCACCTGGCCACGGCGGGCACTCAG < 41bp 0.494014231196168 0.707767576157709 0.35608566 0.40636626 prediction 0.415535152315418 Functional Gain - SLCO4A1 ENSG00000101187 UTR3 Human protein_coding chr20:61303263 chr20:61303264 . . 0 22 hm5C_associated_SNPs_125792 0 0 1 SRSF7 POSTAR2 ENCODE chr20:61303236-61303284
64251 chr19 6744601 6744601 1 + C T rs138265315 6744600 + 6744580 6744620 41 GATGAACGCAGGGCCACCCGCCTGGGTGCCGGGTATGGGCT GATGAACGCAGGGCCACCCGCTTGGGTGCCGGGTATGGGCT < 41bp 0.450242063576092 0.70775649808495 0.16354796 0.18304408 prediction 0.4155129961699 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6744600 chr19:6744601 synonymous SNV . 0 22 hm5C_associated_SNPs_125796 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:6744582-6744620
64251 chr6 160471612 160471612 1 + C A COAD 160471608 + 160471588 160471628 41 TCTGGAATACGTGAATGGGTCGGCCTGCACCACCAGCGATG TCTGGAATACGTGAATGGGTCGGCATGCACCACCAGCGATG < 41bp 0.299611078260932 0.707756088218921 0.20592993 0.3296754 prediction 0.415512176437843 Functional Gain - IGF2R ENSG00000197081 CDS Human protein_coding chr6:160471608 chr6:160471612 synonymous SNV . 0 25 hm5C_associated_SNPs_125797 0 0 4 BUD13 POSTAR2 ENCODE chr6:160471594-160471635
64251 chr2 120436811 120436811 1 + C G rs574817304 120436807 + 120436787 120436827 41 CGAGCGGCGGCGGAGGTGAGCGCACGGACGAGCGGGAGGGA CGAGCGGCGGCGGAGGTGAGCGCAGGGACGAGCGGGAGGGA < 41bp 0.65819052746848 0.86594626541996 0.8208115 0.8747027 prediction 0.415511475902962 Functional Gain - TMEM177 ENSG00000144120 UTR5 Human protein_coding chr2:120436807 chr2:120436811 . . 0 25 hm5C_associated_SNPs_125798 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:120436781-120436842
64251 chr11 17336988 17336988 1 + A G BLCA 17336985 + 17336965 17337005 41 GGAGGAGTTTTTGAAAGCCACAGAAAAAAAAGAATTCTTGG GGAGGAGTTTTTGAAAGCCACAGGAAAAAAAGAATTCTTGG < 41bp 0.538090855183476 0.745844195075583 0.82953084 0.78344846 prediction 0.415506679784215 Functional Gain - NUCB2 ENSG00000070081 CDS Human protein_coding chr11:17336985 chr11:17336988 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125800 0 0 3 UCHL5 POSTAR2 ENCODE chr11:17336946-17337023
64251 chr10 103316180 103316180 1 + T G rs192286360 103316178 + 103316158 103316198 41 CCCATAATTGGACTAGATACCTTGGTACTGTTGACCTTCTC CCCATAATTGGACTAGATACCTGGGTACTGTTGACCTTCTC < 41bp 0.420227632849853 0.707753188488127 0.04567188 0.27140364 prediction 0.415506376976254 Functional Gain - BTRC ENSG00000166167 UTR3 Human protein_coding chr10:103316178 chr10:103316180 . . 0 23 hm5C_associated_SNPs_125801 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:103316138-103316204
64251 chr1 44878130 44878130 1 + C T BLCA 44878129 + 44878109 44878149 41 CATAGTGGTGTGGGGGCTTTCCGGCCCTTTGCCTCCACCGA CATAGTGGTGTGGGGGCTTTCTGGCCCTTTGCCTCCACCGA < 41bp 0.464885597424264 0.707750156564469 0.9057478 0.33224612 prediction 0.415500313128938 Functional Gain - RNF220 ENSG00000187147 CDS Human protein_coding chr1:44878129 chr1:44878130 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_125802 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:44878107-44878131
64251 chr20 34828396 34828396 1 + C T rs149423857 34828395 + 34828375 34828415 41 ACCAGAGATGAAGCCCAGAGCCGGGACAGAGATCCGCTTCT ACCAGAGATGAAGCCCAGAGCTGGGACAGAGATCCGCTTCT < 41bp 0.591873191306075 0.799622270305838 0.8927903 0.57954955 prediction 0.415498157999527 Functional Gain - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34828395 chr20:34828396 synonymous SNV . 0 22 hm5C_associated_SNPs_125803 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:34828392-34828418
64251 chr19 13059912 13059912 1 + C T SKCM 13059911 + 13059891 13059931 41 ACAGGGAATTCCTGGGAGCCCCGAGCCGGAACACGGTTCTG ACAGGGAATTCCTGGGAGCCCTGAGCCGGAACACGGTTCTG < 41bp 0.587539178840274 0.795281562648175 0.24800265 0.21778682 prediction 0.415484767615801 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059911 chr19:13059912 synonymous SNV . 0 22 hm5C_associated_SNPs_125805 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:13059896-13059918
64251 chr7 48141548 48141548 1 + T C COAD 48141546 + 48141526 48141566 41 GCGGGAACTGACCGCTATGCCATGTATAAAGTAGGACCGGT GCGGGAACTGACCGCTATGCCACGTATAAAGTAGGACCGGT < 41bp 0.429854996004512 0.707736840244409 0.25933185 0.2796598 prediction 0.415473680488817 Functional Gain - UPP1 ENSG00000183696 CDS Human protein_coding chr7:48141546 chr7:48141548 nonsynonymous SNV 0.999 5 23 hm5C_associated_SNPs_125808 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr7:48141540-48141560
64251 chr2 220073151 220073151 1 + C T SKCM 220073150 + 220073130 220073170 41 CTTCAATGTCTGTCGTAGAGCCACAACCCGATCTCCGTCCT CTTCAATGTCTGTCGTAGAGCTACAACCCGATCTCCGTCCT < 41bp 0.603380580884429 0.811115631004733 0.045059472 0.0589211 prediction 0.415470100240609 Functional Gain - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220073150 chr2:220073151 synonymous SNV . 0 22 hm5C_associated_SNPs_125810 0 0 3 DDX55 POSTAR2 ENCODE chr2:220073143-220073181
64251 chr17 73229030 73229030 1 + A G SKCM 73229027 + 73229007 73229047 41 CCTCTCTTGGAGCATCCGTGCTAAGGATGCCGCCTTTGCCA CCTCTCTTGGAGCATCCGTGCTAGGGATGCCGCCTTTGCCA < 41bp 0.622408508293117 0.830141181856385 0.47011477 0.90632427 prediction 0.415465347126536 Functional Gain - NUP85 ENSG00000125450 CDS Human protein_coding chr17:73229027 chr17:73229030 nonsynonymous SNV 0.993 0 24 hm5C_associated_SNPs_125813 0 0 2 ALKBH5 POSTAR2 GSE38201,GSM936506 chr17:73229013-73229039
64251 chr9 116930029 116930029 1 + C T rs147354366 116930028 + 116930008 116930048 41 AGGCCGGGAGCCCTGCACCCCCGGGAGTCATTCCTTTCCAG AGGCCGGGAGCCCTGCACCCCTGGGAGTCATTCCTTTCCAG < 41bp 0.567457763700439 0.775190419240459 0.8075935 0.64731336 prediction 0.41546531108004 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116930028 chr9:116930029 nonsynonymous SNV 0.038 0 22 hm5C_associated_SNPs_125814 0 0 3 EIF3A POSTAR2 GSE65004,GSM1585665 chr9:116930022-116930066
64251 chr5 76128973 76128973 1 + A G SARC 76128970 + 76128950 76128990 41 GGTATTGGGTCATCGTGAACCCCATGGGGCACTCCAGGAAG GGTATTGGGTCATCGTGAACCCCGTGGGGCACTCCAGGAAG < 41bp 0.456702078753356 0.707724794369873 0.117613375 0.19424114 prediction 0.415449588739746 Functional Gain - F2RL1 ENSG00000164251 CDS Human protein_coding chr5:76128970 chr5:76128973 nonsynonymous SNV 0.953 1 24 hm5C_associated_SNPs_125818 0 0 3 CPSF3 POSTAR2 GSE37401,GSM917668 chr5:76128965-76128987
64251 chr16 81078139 81078139 1 + C G BLCA 81078135 + 81078115 81078155 41 AGACTCAAACGGACTTCTTACTCGCAGATACCTCTGCTCAG AGACTCAAACGGACTTCTTACTCGGAGATACCTCTGCTCAG < 41bp 0.592305182442164 0.800027034729579 0.094935864 0.1100117 prediction 0.415443704574831 Functional Gain - ATMIN ENSG00000166454 CDS Human protein_coding chr16:81078135 chr16:81078139 nonsynonymous SNV 0.065 1 25 hm5C_associated_SNPs_125820 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:81078080-81078154
64251 chr9 117386706 117386706 1 + C T rs34482578 117386705 + 117386685 117386725 41 CATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAA CATCTCCTTCGACCTGGGAGCTGCAGAAGAGCAACTGCAAA < 41bp 0.448126692981934 0.707720055546585 0.8865122 0.72413945 prediction 0.41544011109317 Functional Gain - TMEM268 ENSG00000157693 CDS Human protein_coding chr9:117386705 chr9:117386706 synonymous SNV . 0 22 hm5C_associated_SNPs_125821 0 0 2 EWSR1 POSTAR2 SRX029344 chr9:117386680-117386707
64251 chr6 31379961 31379961 1 + T C UCEC 31379959 + 31379939 31379979 41 GAGCAGAGGTTCACCTGCTACATGGAACACAGCGGGAATCA GAGCAGAGGTTCACCTGCTACACGGAACACAGCGGGAATCA < 41bp 0.567696184757407 0.775415688256258 0.45095026 0.36564997 prediction 0.415439006997701 Functional Gain - MICA ENSG00000204520 CDS Human protein_coding chr6:31379959 chr6:31379961 nonsynonymous SNV 0.001 2 23 hm5C_associated_SNPs_125822 0 0 1 GRWD1 POSTAR2 ENCODE chr6:31379929-31379984
64251 chr9 71842927 71842927 1 + C T rs17062723 71842926 + 71842906 71842946 41 GGACACGCCGAGCAGATTGTCCAGGATGGGTGCGACACCCA GGACACGCCGAGCAGATTGTCTAGGATGGGTGCGACACCCA < 41bp 0.453998645711969 0.707713262141793 0.21715993 0.27279198 prediction 0.415426524283586 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71842926 chr9:71842927 synonymous SNV . 0 22 hm5C_associated_SNPs_125824 2 0 5 FXR2 POSTAR2 ENCODE chr9:71842899-71842940
64251 chr9 116931489 116931489 1 + C T UCEC 116931488 + 116931468 116931508 41 GCCGGACCCAAGAGCAGCCCCCGGAAGCCTGTCCCCCTCAG GCCGGACCCAAGAGCAGCCCCTGGAAGCCTGTCCCCCTCAG < 41bp 0.472660747570993 0.707701876788131 0.87440574 0.88298863 prediction 0.415403753576261 Functional Gain - COL27A1 ENSG00000196739 CDS Human protein_coding chr9:116931488 chr9:116931489 nonsynonymous SNV 0.138 1 22 hm5C_associated_SNPs_125829 0 0 3 BUD13 POSTAR2 ENCODE chr9:116931455-116931513
64251 chr3 186761056 186761056 1 + T C HNSC 186761054 + 186761034 186761074 41 GGGCAGGTGTGCTGTTGTGTCGTCAGCGGGATCTCTGAAGT GGGCAGGTGTGCTGTTGTGTCGCCAGCGGGATCTCTGAAGT < 41bp 0.66653422239665 0.874235599204414 0.3200711 0.42866254 prediction 0.415402753615528 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186761054 chr3:186761056 nonsynonymous SNV 0.461 4 23 hm5C_associated_SNPs_125830 0 0 8 DDX6 POSTAR2 ENCODE chr3:186760964-186761059
64251 chr2 239237867 239237867 1 + C T STAD 239237866 + 239237846 239237886 41 GAGAGACTGAGAGACAGGGACCGAGAGCGCGACCGGGACAA GAGAGACTGAGAGACAGGGACTGAGAGCGCGACCGGGACAA < 41bp 0.488247061148372 0.707695460468487 0.2084223 0.22783592 prediction 0.415390920936974 Functional Gain - TRAF3IP1 ENSG00000204104 CDS Human protein_coding chr2:239237866 chr2:239237867 stopgain 0.001 0 22 hm5C_associated_SNPs_125832 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350200 chr2:239237851-239237872
64251 chr13 20247171 20247171 1 + A G rs4769866 20247168 + 20247148 20247188 41 AAAGGCCACTGCACTCCAGCCTGAGTGACAGAATGAGACCT AAAGGCCACTGCACTCCAGCCTGGGTGACAGAATGAGACCT < 41bp 0.558908352461611 0.76659812343563 0.045028895 0.34656587 prediction 0.415379541948038 Functional Gain - MPHOSPH8 ENSG00000257110 ncRNA_exonic Human other chr13:20247168 chr13:20247171 . . 0 24 hm5C_associated_SNPs_125833 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr13:20247160-20247181
64251 chr11 63755856 63755856 1 + C A LIHC 63755855 + 63755835 63755875 41 GCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGGTGAG GCCATCATGGCTCAGCAGGACAGAATTCAGCAAGAGGTGAG < 41bp 0.439765078684318 0.707682275784463 0.16200337 0.31467456 prediction 0.415364551568925 Functional Gain - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63755855 chr11:63755856 synonymous SNV . 0 22 hm5C_associated_SNPs_125836 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012388 chr11:63755835-63755868
64251 chr1 26888150 26888150 1 + A G LIHC 26888147 + 26888127 26888167 41 AACTGTGGAGTATCTGCACTCACAGGGGGTGAGTCTGGATT AACTGTGGAGTATCTGCACTCACGGGGGGTGAGTCTGGATT < 41bp 0.610298093468631 0.817977471690933 0.4325964 0.8727512 prediction 0.415358756444605 Functional Gain - RPS6KA1 ENSG00000117676 CDS Human protein_coding chr1:26888147 chr1:26888150 nonsynonymous SNV 0.960 3 24 hm5C_associated_SNPs_125839 0 0 2 DDX24 POSTAR2 ENCODE chr1:26888101-26888154
64251 chr3 100074060 100074060 1 + T A SKCM 100074056 + 100074036 100074076 41 CTGAAATACGCCAGCAAATCCCCGTTTTTAGACAGAAGCGA CTGAAATACGCCAGCAAATCCCCGATTTTAGACAGAAGCGA < 41bp 0.380180239114495 0.707667058480102 0.09114364 0.16903979 prediction 0.415334116960205 Functional Gain - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100074056 chr3:100074060 nonsynonymous SNV 0.960 2 25 hm5C_associated_SNPs_125841 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr3:100074038-100074076
64251 chr10 69644503 69644503 1 + C A rs190121724 69644502 + 69644482 69644522 41 GGCGGACGAGGCGGCCCTCGCCCTTCAGCCCGGCGGCTCCC GGCGGACGAGGCGGCCCTCGCACTTCAGCCCGGCGGCTCCC < 41bp 0.582467351219977 0.79012989817486 0.069710106 0.25415605 prediction 0.415325093909766 Functional Gain - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69644502 chr10:69644503 synonymous SNV . 0 22 hm5C_associated_SNPs_125842 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr10:69644483-69644503
64251 chr17 28444344 28444344 1 + A G rs562891814 28444341 + 28444321 28444361 41 AATATTGTTCTGAGAAGCCACAGAAAAAGGGTAGGCATATA AATATTGTTCTGAGAAGCCACAGGAAAAGGGTAGGCATATA < 41bp 0.534056244282555 0.741708127446388 0.11717421 0.19586158 prediction 0.415303766327666 Functional Gain - NSRP1 ENSG00000126653 CDS Human protein_coding chr17:28444341 chr17:28444344 synonymous SNV . 0 24 hm5C_associated_SNPs_125847 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:28444315-28444366
64251 chr17 65714106 65714106 1 + C A LUAD 65714105 + 65714085 65714125 41 TTCACGTTGTCTTCGGTAGTCCTGAGCGCCGGGCCTGAAGG TTCACGTTGTCTTCGGTAGTCATGAGCGCCGGGCCTGAAGG < 41bp 0.621185334862588 0.828836459690796 0.2818104 0.8155541 prediction 0.415302249656416 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65714105 chr17:65714106 nonsynonymous SNV 0.001 2 22 hm5C_associated_SNPs_125849 0 0 24 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:65714060-65714120
64251 chr22 38364823 38364823 1 + C G rs3026643 38364822 + 38364802 38364842 41 GCCTCCAGGCCTAGGTGCAGCCTGGCCCTGGGATGGGATGT GCCTCCAGGCCTAGGTGCAGCGTGGCCCTGGGATGGGATGT < 41bp 0.421425135425472 0.707628216620256 0.11568782 0.32901046 prediction 0.415256433240512 Functional Gain - POLR2F ENSG00000100142 UTR3 Human protein_coding chr22:38364822 chr22:38364823 . . 0 22 hm5C_associated_SNPs_125858 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr22:38364818-38364851
64251 chr1 52870474 52870474 1 + A G UCEC 52870471 + 52870451 52870491 41 CAGCATCCATGGCACCAACCCTCAATATCTGGTGGAGAAGA CAGCATCCATGGCACCAACCCTCGATATCTGGTGGAGAAGA < 41bp 0.585270912222777 0.792898103039179 0.0333443 0.8741371 prediction 0.415254381632804 Functional Gain - PRPF38A ENSG00000134748 CDS Human protein_coding chr1:52870471 chr1:52870474 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_125859 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:52870453-52870481
64251 chr16 30409766 30409766 1 + C T SKCM 30409765 + 30409745 30409785 41 TATCCCCTACCCGCTCTGATCCCCAGCCCACCCCCACCTCC TATCCCCTACCCGCTCTGATCTCCAGCCCACCCCCACCTCC < 41bp 0.631967785625035 0.839593233274284 0.14110693 0.9272872 prediction 0.415250895298497 Functional Gain - ZNF48 ENSG00000180035 CDS Human protein_coding chr16:30409765 chr16:30409766 nonsynonymous SNV 0.832 0 22 hm5C_associated_SNPs_125860 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:30409720-30409769
64251 chrX 100078981 100078981 1 + C T PAAD 100078980 + 100078960 100079000 41 TAGTGATGAGAATTGTGGATCCGGAAATTGCCCTGGTGAGT TAGTGATGAGAATTGTGGATCTGGAAATTGCCCTGGTGAGT < 41bp 0.454312787722484 0.707622024597434 0.6310127 0.3462975 prediction 0.415244049194868 Functional Gain - CSTF2 ENSG00000101811 CDS Human protein_coding chrX:100078980 chrX:100078981 nonsynonymous SNV 0.976 4 22 hm5C_associated_SNPs_125863 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:100078951-100078985
64251 chr9 116041316 116041316 1 + T C rs146246780 116041313 + 116041293 116041333 41 AGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTC AGGAAGCGAGCCCGGCAGATCAACGTTTCCACAGATGACTC < 41bp 0.520229440425546 0.727849782074837 0.14880586 0.15959504 prediction 0.415240683298582 Functional Gain - PRPF4 ENSG00000136875 CDS Human protein_coding chr9:116041313 chr9:116041316 synonymous SNV . 0 24 hm5C_associated_SNPs_125865 0 0 2 EFTUD2 POSTAR2 ENCODE chr9:116041283-116041332
64251 chr20 61460123 61460123 1 + C A LUAD 61460122 + 61460102 61460142 41 TCCCTTGTCCCCAGGGCATGCCGGGCAAGGACGGCCAGAAT TCCCTTGTCCCCAGGGCATGCAGGGCAAGGACGGCCAGAAT < 41bp 0.440975144487645 0.707617151365507 0.39832366 0.6707921 prediction 0.415234302731014 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61460122 chr20:61460123 nonsynonymous SNV 0.978 5 22 hm5C_associated_SNPs_125866 0 0 5 EFTUD2 POSTAR2 ENCODE chr20:61460073-61460142
64251 chr17 53016342 53016342 1 + A G UCEC 53016339 + 53016319 53016359 41 CTTAAAACCCAGTCTTCATCCACAGATGAACTTGCTAGCCT CTTAAAACCCAGTCTTCATCCACGGATGAACTTGCTAGCCT < 41bp 0.513657639197836 0.721269914822071 0.07876772 0.37638927 prediction 0.41522455124847 Functional Gain - TOM1L1 ENSG00000141198 CDS Human protein_coding chr17:53016339 chr17:53016342 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_125870 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:53016284-53016343
64251 chrX 105970275 105970275 1 + C T UCEC 105970274 + 105970254 105970294 41 GGGGGCTGAAGCAGTGTGGACCGCGTACCTCAACGTGTCCT GGGGGCTGAAGCAGTGTGGACTGCGTACCTCAACGTGTCCT < 41bp 0.558358810243628 0.765967068232603 0.8818599 0.84020483 prediction 0.415216515977949 Functional Gain - RNF128 ENSG00000133135 CDS Human protein_coding chrX:105970274 chrX:105970275 synonymous SNV . 0 22 hm5C_associated_SNPs_125872 0 0 3 DDX3X POSTAR2 ENCODE chrX:105970193-105970289
64251 chr3 49568970 49568970 1 + C T SKCM 49568969 + 49568949 49568989 41 ATCCAGGATCGTGCCAACCCCCACATCTCCAGCCATTGCTC ATCCAGGATCGTGCCAACCCCTACATCTCCAGCCATTGCTC < 41bp 0.448088358235005 0.7076035366145 0.0066447556 0.35123748 prediction 0.415207073229001 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568969 chr3:49568970 synonymous SNV . 0 22 hm5C_associated_SNPs_125874 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr3:49568960-49568980
64251 chr8 42977499 42977499 1 + A G LIHC 42977496 + 42977476 42977516 41 AAAATGTGAACACGTGGCAGCACAGGCTGGAGCTGGCCATG AAAATGTGAACACGTGGCAGCACGGGCTGGAGCTGGCCATG < 41bp 0.461422370604362 0.70758564984443 0.064602256 0.06139645 prediction 0.415171299688861 Functional Gain - POMK ENSG00000185900 CDS Human protein_coding chr8:42977496 chr8:42977499 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_125880 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr8:42977400-42977500
64251 chr19 17212853 17212853 1 + T A LUSC 17212849 + 17212829 17212869 41 AGGAGGATGGCTACTACTTCCTGCTGCAGGAGCGCAACGCA AGGAGGATGGCTACTACTTCCTGCAGCAGGAGCGCAACGCA < 41bp 0.368641941788066 0.707576392415475 0.10627884 0.18549946 prediction 0.415152784830951 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17212849 chr19:17212853 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_125885 0 0 1 BUD13 POSTAR2 ENCODE chr19:17212762-17212867
64251 chr1 248059102 248059102 1 + A G COAD 248059099 + 248059079 248059119 41 CCCACCTTTCCTTCCTGGACCTCAGTTTCACCACCAGCTCC CCCACCTTTCCTTCCTGGACCTCGGTTTCACCACCAGCTCC < 41bp 0.444084421299684 0.707563627299158 0.017736852 0.0708254 prediction 0.415127254598315 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059099 chr1:248059102 nonsynonymous SNV 0.914 1 24 hm5C_associated_SNPs_125890 0 0 1 METAP2 POSTAR2 ENCODE chr1:248059067-248059146
64251 chr7 1024067 1024067 1 + C T COAD 1024066 + 1024046 1024086 41 AGCTCTCAGAACGCTACGGGCCGGTGTTCACCGTGCACCTG AGCTCTCAGAACGCTACGGGCTGGTGTTCACCGTGCACCTG < 41bp 0.515280723653009 0.722838285335216 0.9179293 0.5493633 prediction 0.415115123364414 Functional Gain - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1024066 chr7:1024067 nonsynonymous SNV 0.015 5 22 hm5C_associated_SNPs_125891 0 0 1 PPIG POSTAR2 ENCODE chr7:1024064-1024096
64251 chr11 43904227 43904227 1 + C T ESCA 43904226 + 43904206 43904246 41 GAGGAAAAAAGACGGCGAGCCCGAGTTCAGGGAGCCTGGGC GAGGAAAAAAGACGGCGAGCCTGAGTTCAGGGAGCCTGGGC < 41bp 0.465903572851032 0.70755740928723 0.2349832 0.14175984 prediction 0.415114818574459 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43904226 chr11:43904227 stopgain 0.993 1 22 hm5C_associated_SNPs_125892 0 0 1 YBX3 POSTAR2 ENCODE chr11:43904199-43904250
64251 chr19 38899447 38899447 1 + C G OV 38899443 + 38899423 38899463 41 CCGCCCAAATGAGCTGGAGCCTCCCATGCCCACCTGGAGGA CCGCCCAAATGAGCTGGAGCCTCCGATGCCCACCTGGAGGA < 41bp 0.648822770080585 0.856377485688015 0.40928447 0.49817058 prediction 0.41510943121486 Functional Gain - FAM98C ENSG00000130244 CDS Human protein_coding chr19:38899443 chr19:38899447 synonymous SNV . 0 25 hm5C_associated_SNPs_125893 0 0 3 DDX6 POSTAR2 ENCODE chr19:38899435-38899609
64251 chr20 36396432 36396432 1 + T G rs529268673 36396429 + 36396409 36396449 41 AGCAGGGTCTTCTACAGTGGCTGTTGAAGAGGCTGAAGGTG AGCAGGGTCTTCTACAGTGGCTGGTGAAGAGGCTGAAGGTG < 41bp 0.309571364367664 0.707550053475591 0.26792854 0.53442216 prediction 0.415100106951182 Functional Gain - CTNNBL1 ENSG00000132792 CDS Human protein_coding chr20:36396429 chr20:36396432 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_125895 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr20:36396411-36396443
64251 chrX 54836450 54836450 1 + A G rs185932631 54836447 + 54836427 54836467 41 CAAGAAACAGAATGCTGACCCGCAGGCTGTGACAATGCCTG CAAGAAACAGAATGCTGACCCGCGGGCTGTGACAATGCCTG < 41bp 0.596645889768964 0.804194115194873 0.07276198 0.22319344 prediction 0.415096450851818 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54836447 chrX:54836450 nonsynonymous SNV 0.442 1 24 hm5C_associated_SNPs_125896 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:54836444-54836473
64251 chr20 34535466 34535466 1 + C G BLCA 34535462 + 34535442 34535482 41 GAGCCCCCTGAGCCGCTGGCCAGGCTTCCGCAGCTCAAGCA GAGCCCCCTGAGCCGCTGGCCAGGGTTCCGCAGCTCAAGCA < 41bp 0.426771940305402 0.707539496587871 0.7621022 0.88765526 prediction 0.415078993175741 Functional Gain - PHF20 ENSG00000025293 CDS Human protein_coding chr20:34535462 chr20:34535466 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_125899 0 0 2 LIN28B POSTAR2 ENCODE chr20:34535466-34535552
64251 chr19 16620383 16620383 1 + C T UCEC 16620382 + 16620362 16620402 41 CGTCCACTGGGCAGGATGCCCCGAGGCAGGCCCAGGCGAGG CGTCCACTGGGCAGGATGCCCTGAGGCAGGCCCAGGCGAGG < 41bp 0.473394957877683 0.707539431929384 0.7718027 0.33161825 prediction 0.415078863858768 Functional Gain - C19orf44 ENSG00000105072 CDS Human protein_coding chr19:16620382 chr19:16620383 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_125900 0 0 2 EIF3H POSTAR2 ENCODE chr19:16620311-16620428
64251 chr9 128723127 128723127 1 + C T HNSC 128723126 + 128723106 128723146 41 TTCGCCCACCACACCAAATTCCGGTGCGTACTGGGGGCTCG TTCGCCCACCACACCAAATTCTGGTGCGTACTGGGGGCTCG < 41bp 0.616643129007564 0.824177920455869 0.63669896 0.6340281 prediction 0.41506958289661 Functional Gain - PBX3 ENSG00000167081 CDS Human protein_coding chr9:128723126 chr9:128723127 synonymous SNV . 0 22 hm5C_associated_SNPs_125903 0 0 1 PRPF8 POSTAR2 ENCODE chr9:128723120-128723170
64251 chr18 71825309 71825309 1 + C T CESC 71825308 + 71825288 71825328 41 GAGGTGACAAGGCGGGGTCGCCGGCAGCATGTCAGGTACTG GAGGTGACAAGGCGGGGTCGCTGGCAGCATGTCAGGTACTG < 41bp 0.585039596923503 0.792572909538764 0.8222374 0.38778034 prediction 0.41506662523052 Functional Gain - TIMM21 ENSG00000075336 CDS Human protein_coding chr18:71825308 chr18:71825309 nonsynonymous SNV 0.043 4 22 hm5C_associated_SNPs_125904 0 0 1 ZRANB2 POSTAR2 ENCODE chr18:71825289-71825335
64251 chr8 144461533 144461533 1 + A G COAD 144461530 + 144461510 144461550 41 CTTCTCCCATGCGCCGAGCCCAGACATGAGCGCTGCGTCCC CTTCTCCCATGCGCCGAGCCCAGGCATGAGCGCTGCGTCCC < 41bp 0.451495507781325 0.707529071869838 0.72048646 0.90310824 prediction 0.415058143739677 Functional Gain - RHPN1 ENSG00000158106 CDS Human protein_coding chr8:144461530 chr8:144461533 nonsynonymous SNV 0.885 4 24 hm5C_associated_SNPs_125905 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr8:144461532-144461533
64251 chr15 73562506 73562506 1 + A G BLCA 73562503 + 73562483 73562523 41 ACAACTCGCTGCCCAAGCACCAGAAGATTACAGACTCCCGA ACAACTCGCTGCCCAAGCACCAGGAGATTACAGACTCCCGA < 41bp 0.475348565585413 0.707528729572931 0.5539036 0.8304825 prediction 0.415057459145862 Functional Gain - NEO1 ENSG00000067141 CDS Human protein_coding chr15:73562503 chr15:73562506 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_125906 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:73562499-73562522
64251 chrX 48673986 48673986 1 + C A UCS 48673985 + 48673965 48674005 41 TTCTCCCTGCCCTGCAGTGCCCAGGCTTCAGTTTCCTGTGC TTCTCCCTGCCCTGCAGTGCCAAGGCTTCAGTTTCCTGTGC < 41bp 0.452366579951423 0.707524234936488 0.20295817 0.18637541 prediction 0.415048469872977 Functional Gain - HDAC6 ENSG00000094631 CDS Human protein_coding chrX:48673985 chrX:48673986 nonsynonymous SNV 0.197 0 22 hm5C_associated_SNPs_125908 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917668 chrX:48673978-48673999
64251 chr10 134018446 134018446 1 + C T rs201110426 134018445 + 134018425 134018465 41 TCTCTCCTAGACGCCCAGGACCGGCCCTGTGAGCCGTGCTG TCTCTCCTAGACGCCCAGGACTGGCCCTGTGAGCCGTGCTG < 41bp 0.498522788098446 0.707522259130815 0.25400218 0.23310891 prediction 0.41504451826163 Functional Gain - DPYSL4 ENSG00000151640 UTR3 Human protein_coding chr10:134018445 chr10:134018446 . . 0 22 hm5C_associated_SNPs_125909 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:134018443-134018510
64251 chr17 18133303 18133303 1 + C T SKCM 18133302 + 18133282 18133322 41 CCCAGCGCCCTGGCCTTCGACCCGGAACTTCGCATCATGGC CCCAGCGCCCTGGCCTTCGACTCGGAACTTCGCATCATGGC < 41bp 0.441864500350777 0.707508892420966 0.3176707 0.087453574 prediction 0.415017784841933 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18133302 chr17:18133303 nonsynonymous SNV 0.342 1 22 hm5C_associated_SNPs_125913 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18133293-18133313
64251 chrX 70390787 70390787 1 + T C rs764152035 70390785 + 70390765 70390805 41 ACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGG ACAACGTACTATGGAAGCCACACCACTATTGGGCCCCCAGG < 41bp 0.567088627248746 0.774597461262766 0.04027602 0.027294844 prediction 0.41501766802804 Functional Gain - NLGN3 ENSG00000196338 UTR3 Human protein_coding chrX:70390785 chrX:70390787 . . 0 23 hm5C_associated_SNPs_125914 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:70390781-70390804
64251 chr12 113659276 113659276 1 + C A rs540239282 113659272 + 113659252 113659292 41 GTAGGCGGTGGATAGGAGAGCTGGCGCAGCTGCCCTGGTGG GTAGGCGGTGGATAGGAGAGCTGGAGCAGCTGCCCTGGTGG < 41bp 0.714592226032598 0.922089986057502 0.59063685 0.6498196 prediction 0.414995520049809 Functional Gain - TPCN1 ENSG00000186815 UTR5 Human protein_coding chr12:113659272 chr12:113659276 . . 0 25 hm5C_associated_SNPs_125918 0 0 1 NCBP2 POSTAR2 ENCODE chr12:113659271-113659424
64251 chr2 75113668 75113668 1 + T A LUSC 75113664 + 75113644 75113684 41 AGGAGATGCGCAACGTGGAACTGGTGGAAGGAGAAGAGGGG AGGAGATGCGCAACGTGGAACTGGAGGAAGGAGAAGAGGGG < 41bp 0.368252506461593 0.707495732549614 0.41075075 0.5517515 prediction 0.414991465099227 Functional Gain - HK2 ENSG00000159399 CDS Human protein_coding chr2:75113664 chr2:75113668 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_125921 0 0 1 PPIG POSTAR2 ENCODE chr2:75113630-75113692
64251 chr10 70516175 70516175 1 + C T BLCA 70516174 + 70516154 70516194 41 TCAGAGTGGGAAACCCTCTCCCGAGGATACAAGCAGCAGCT TCAGAGTGGGAAACCCTCTCCTGAGGATACAAGCAGCAGCT < 41bp 0.461125356161387 0.707490900565077 0.4290011 0.20652533 prediction 0.414981801130155 Functional Gain - CCAR1 ENSG00000060339 CDS Human protein_coding chr10:70516174 chr10:70516175 stopgain 1.000 1 22 hm5C_associated_SNPs_125923 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70516152-70516233
64251 chr7 150746440 150746440 1 + C T SKCM 150746439 + 150746419 150746459 41 CTATGCCCGTGCTGGGCACTCCCTGGATGACATGCTGCTGG CTATGCCCGTGCTGGGCACTCTCTGGATGACATGCTGCTGG < 41bp 0.463571598351275 0.70748364701723 0.23707658 0.19552463 prediction 0.414967294034459 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746439 chr7:150746440 synonymous SNV . 0 22 hm5C_associated_SNPs_125925 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:150746429-150746463
64251 chr12 4460522 4460522 1 + C T STAD 4460521 + 4460501 4460541 41 GTGCCCTGTGTTTACACCGCCCGGAGGAGAGACGCTGGACC GTGCCCTGTGTTTACACCGCCTGGAGGAGAGACGCTGGACC < 41bp 0.618454082324011 0.825933352059323 0.6062689 0.59939104 prediction 0.414958539470625 Functional Gain - TIGAR ENSG00000078237 CDS Human protein_coding chr12:4460521 chr12:4460522 synonymous SNV . 0 22 hm5C_associated_SNPs_125927 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:4460508-4460531
64251 chr7 56020921 56020921 1 + A G COAD 56020918 + 56020898 56020938 41 GTTCGCTCATCCGTCCATGCCAGATGGATTGTGGGGAAGGT GTTCGCTCATCCGTCCATGCCAGGTGGATTGTGGGGAAGGT < 41bp 0.570033357507058 0.777511517058198 0.36950096 0.71115535 prediction 0.41495631910228 Functional Gain - MRPS17 ENSG00000239789;ENSG00000249773 CDS Human other chr7:56020918 chr7:56020921 synonymous SNV . 0 24 hm5C_associated_SNPs_125929 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:56020896-56020932
64251 chr11 73364058 73364058 1 + C T GBM 73364057 + 73364037 73364077 41 TGCTGGAGGCAAACTCCACCCCGGTGAGTCTCCCGTTCTCT TGCTGGAGGCAAACTCCACCCTGGTGAGTCTCCCGTTCTCT < 41bp 0.458338176740914 0.707475079041178 0.65265447 0.7104534 prediction 0.414950158082356 Functional Gain - PLEKHB1 ENSG00000021300 CDS Human protein_coding chr11:73364057 chr11:73364058 nonsynonymous SNV 0.243 2 22 hm5C_associated_SNPs_125933 0 0 2 PPIG POSTAR2 ENCODE chr11:73364018-73364063
64251 chr2 63283987 63283987 1 + C A rs187464743 63283986 + 63283966 63284006 41 TCGATTTTGCTCCACGCCTGCCGGCCAGAGCCTCCCGGCGT TCGATTTTGCTCCACGCCTGCAGGCCAGAGCCTCCCGGCGT < 41bp 0.444048337200965 0.707473497762273 0.2766079 0.90779763 prediction 0.414946995524546 Functional Gain - OTX1 ENSG00000115507 UTR3 Human protein_coding chr2:63283986 chr2:63283987 . . 0 22 hm5C_associated_SNPs_125934 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:63283980-63284000
64251 chr2 136409330 136409330 1 + A G COAD 136409327 + 136409307 136409347 41 ACCTAGGGTCTCAGTTTAGCCACATGAGTCTTGCTCGCCAG ACCTAGGGTCTCAGTTTAGCCACGTGAGTCTTGCTCGCCAG < 41bp 0.593973432714417 0.801442504564582 0.8885748 0.85570335 prediction 0.41493814370033 Functional Gain - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136409327 chr2:136409330 nonsynonymous SNV 0.999 2 24 hm5C_associated_SNPs_125937 0 0 7 IGF2BP1 POSTAR2 ENCODE chr2:136409299-136409403
64251 chrX 19379082 19379082 1 + C T rs189054591 19379081 + 19379061 19379101 41 TATGGAGGTGACGCTCGTGTCCCAGCAGTAGTAGGACATGG TATGGAGGTGACGCTCGTGTCTCAGCAGTAGTAGGACATGG < 41bp 0.50457996121295 0.71204845094358 0.016794384 0.024560928 prediction 0.414936979461259 Functional Gain - PDHA1 ENSG00000131828 UTR3 Human protein_coding chrX:19379081 chrX:19379082 . . 0 22 hm5C_associated_SNPs_125938 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:19379042-19379084
64251 chr3 128979469 128979469 1 + T C BLCA 128979467 + 128979447 128979487 41 GTCCTCCCAAAACAGGTTGCCATGAAGCATCCGTCAGCTGT GTCCTCCCAAAACAGGTTGCCACGAAGCATCCGTCAGCTGT < 41bp 0.413227185774779 0.707462908032657 0.30768907 0.082877636 prediction 0.414925816065315 Functional Gain - COPG1 ENSG00000181789 CDS Human protein_coding chr3:128979467 chr3:128979469 nonsynonymous SNV 0.996 1 23 hm5C_associated_SNPs_125941 0 0 2 NCBP2 POSTAR2 ENCODE chr3:128979451-128979498
64251 chr16 29811359 29811359 1 + C T SKCM 29811358 + 29811338 29811378 41 GCAGCTCCAGCCTCTGCCTCCCAGAAACTCAGGTGAGCAGT GCAGCTCCAGCCTCTGCCTCCTAGAAACTCAGGTGAGCAGT < 41bp 0.440428674296576 0.707455808172502 0.28324765 0.13287753 prediction 0.414911616345003 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29811358 chr16:29811359 stopgain 0.994 0 22 hm5C_associated_SNPs_125944 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:29811339-29811367
64251 chr11 65266577 65266577 1 + C A BLCA 65266576 + 65266556 65266596 41 GCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTC GCAGGCGGAGCTTGAGGAAACAGCAGATAAGTTTTTTTCTC < 41bp 0.592968468575321 0.800417864245867 0.37391037 0.45772642 prediction 0.414898791341094 Functional Gain - MALAT1 ENSG00000251562 ncRNA_exonic Human lincRNA chr11:65266576 chr11:65266577 . . 0 22 hm5C_associated_SNPs_125947 0 0 54 RBM47 POSTAR2 GSE58380,GSM1409656 chr11:65266500-65266720
64251 chr17 42254106 42254106 1 - G T SARC 42254110 - 42254090 42254130 41 TGCTTCCAGCAGCAACTTGGCGCACCTGGGGACAAGAGAGC TGCTTCCAGCAGCAACTTGGCGCAACTGGGGACAAGAGAGC < 41bp 0.294080451014819 0.707447949150608 0.08200601 0.26892498 prediction 0.414895898301217 Functional Gain - ASB16 ENSG00000161664 CDS Human protein_coding chr17:42254110 chr17:42254106 nonsynonymous SNV 0.939 0 25 hm5C_associated_SNPs_125949 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:42254076-42254113
64251 chr10 45485152 45485152 1 + T C UCEC 45485150 + 45485130 45485170 41 CCCAGTGAGTTCGCACTCTACATCGTTCACGAGTCTGGGGG CCCAGTGAGTTCGCACTCTACACCGTTCACGAGTCTGGGGG < 41bp 0.41829597026345 0.707444447456611 0.08180785 0.076241374 prediction 0.414888894913221 Functional Gain - RASSF4 ENSG00000107551 CDS Human protein_coding chr10:45485150 chr10:45485152 nonsynonymous SNV 0.982 0 23 hm5C_associated_SNPs_125952 0 0 4 PPIG POSTAR2 ENCODE chr10:45485116-45485169
64251 chr19 49653866 49653866 1 + C G rs12462568 49653862 + 49653842 49653882 41 GCTGCTCCCTCCCCTTTTTCCTGCCCAGTCGCGGGGCCCAA GCTGCTCCCTCCCCTTTTTCCTGCGCAGTCGCGGGGCCCAA < 41bp 0.418164410901649 0.707438084599245 0.057802796 0.0895085 prediction 0.414876169198491 Functional Gain - PPFIA3 ENSG00000177380 UTR3 Human protein_coding chr19:49653862 chr19:49653866 . . 0 25 hm5C_associated_SNPs_125954 0 0 3 DDX55 POSTAR2 ENCODE chr19:49653841-49653916
64251 chr19 4409704 4409704 1 + C A GBM 4409703 + 4409683 4409723 41 CCGAGGGGCCGCCTGCTCCCCCAAAGCAGCACAGCAGTACC CCGAGGGGCCGCCTGCTCCCCAAAAGCAGCACAGCAGTACC < 41bp 0.439117008313246 0.707428693249271 0.057721764 0.1035347 prediction 0.414857386498542 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4409703 chr19:4409704 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_125959 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr19:4409700-4409720
64251 chr17 80010320 80010320 1 + T C BRCA 80010317 + 80010297 80010337 41 CTGAGCGCCAGCCTGTCGGCCTGTACGCTGCTCTACGAGGT CTGAGCGCCAGCCTGTCGGCCTGCACGCTGCTCTACGAGGT < 41bp 0.517625081649254 0.725052445525453 0.01189211 0.014631897 prediction 0.414854727752398 Functional Gain - GPS1 ENSG00000169727;ENSG00000169727 exonic;splicing Human other chr17:80010317 chr17:80010320 synonymous SNV . 0 24 hm5C_associated_SNPs_125961 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr17:80010297-80010330
64251 chr20 377122 377122 1 + C T SKCM 377121 + 377101 377141 41 GCAGGCCTCTCGGCCCCTGCCCGCTGTCTGGTTCGCTGCCT GCAGGCCTCTCGGCCCCTGCCTGCTGTCTGGTTCGCTGCCT < 41bp 0.458591310825282 0.707426160603557 0.3899208 0.31133226 prediction 0.414852321207114 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:377121 chr20:377122 nonsynonymous SNV 0.922 1 22 hm5C_associated_SNPs_125962 0 0 5 DDX55 POSTAR2 ENCODE chr20:377100-377169
64251 chr19 11024599 11024599 1 + C T SKCM 11024598 + 11024578 11024618 41 CGGACCGCATCGTGGTCATCCCGGGCAAGGTGGAGGAGGTG CGGACCGCATCGTGGTCATCCTGGGCAAGGTGGAGGAGGTG < 41bp 0.466344579555184 0.707421109543522 0.6250858 0.6160493 prediction 0.414842219087044 Functional Gain - CARM1 ENSG00000142453 CDS Human protein_coding chr19:11024598 chr19:11024599 nonsynonymous SNV 0.672 1 22 hm5C_associated_SNPs_125964 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr19:11024576-11024603
64251 chr3 57545845 57545845 1 + C G rs148742642 57545841 + 57545821 57545861 41 AGGAGGAATGGTAAAATGTTCAGCCCTCCTAGTTATGTTCC AGGAGGAATGGTAAAATGTTCAGCGCTCCTAGTTATGTTCC < 41bp 0.407627109870768 0.707415707555197 0.16078147 0.19458804 prediction 0.414831415110393 Functional Gain - PDE12 ENSG00000174840 UTR3 Human protein_coding chr3:57545841 chr3:57545845 . . 0 25 hm5C_associated_SNPs_125965 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:57545810-57545848
64251 chr4 5814464 5814464 1 + C T rs74690944 5814463 + 5814443 5814483 41 TCTTCAGGGGAAGGAGCTGCCCAGAGCATCACAGGATGTTC TCTTCAGGGGAAGGAGCTGCCTAGAGCATCACAGGATGTTC < 41bp 0.539024193551737 0.746419401739999 0.2630452 0.2814041 prediction 0.414790416376525 Functional Gain - EVC ENSG00000072840 UTR3 Human protein_coding chr4:5814463 chr4:5814464 . . 0 22 hm5C_associated_SNPs_125972 2 0 1 EIF3H POSTAR2 ENCODE chr4:5814464-5814527
64251 chr2 148684699 148684699 1 + A G LIHC 148684696 + 148684676 148684716 41 GAAGAATGTTGGGATCACGACGCAGAAGCCAGGTTATCAGC GAAGAATGTTGGGATCACGACGCGGAAGCCAGGTTATCAGC < 41bp 0.483728096226089 0.707389361250562 0.15900183 0.82060087 prediction 0.414778722501125 Functional Gain - ACVR2A ENSG00000121989 CDS Human protein_coding chr2:148684696 chr2:148684699 synonymous SNV . 0 24 hm5C_associated_SNPs_125976 0 0 3 DICER1 POSTAR2 GSE55333,GSM1334288 chr2:148684680-148684700
64251 chr7 2701376 2701376 1 + C A rs112743770 2701375 + 2701355 2701395 41 CTCCAGCGGCAGCCACTAGACCGCGCCCGGCAGCCACCCAC CTCCAGCGGCAGCCACTAGACAGCGCCCGGCAGCCACCCAC < 41bp 0.628705187824545 0.83609410429084 0.19999912 0.3333897 prediction 0.41477783293259 Functional Gain - TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2701375 chr7:2701376 . . 0 22 hm5C_associated_SNPs_125977 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:2701376-2701377
64251 chr13 78327370 78327370 1 + C T UCEC 78327369 + 78327349 78327389 41 AGAAGTATGCCTAACCTAGCCCGGATGCCAAGTACAACTGC AGAAGTATGCCTAACCTAGCCTGGATGCCAAGTACAACTGC < 41bp 0.629175457503592 0.836560311395113 0.40535367 0.31144637 prediction 0.414769707783043 Functional Gain - SLAIN1 ENSG00000139737 CDS Human protein_coding chr13:78327369 chr13:78327370 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_125979 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr13:78327353-78327384
64251 chr11 65178737 65178737 1 + C T SKCM 65178736 + 65178716 65178756 41 AGGGGATCAGGCGAGTGAAGCCGAAGCGCACCACATCCTTC AGGGGATCAGGCGAGTGAAGCTGAAGCGCACCACATCCTTC < 41bp 0.467569688426577 0.707384573622097 0.14481023 0.16777551 prediction 0.414769147244193 Functional Gain - FRMD8 ENSG00000126391 CDS Human protein_coding chr11:65178736 chr11:65178737 nonsynonymous SNV 0.992 5 22 hm5C_associated_SNPs_125980 0 0 1 PRPF8 POSTAR2 ENCODE chr11:65178689-65178737
64251 chr11 73357341 73357341 1 + C A rs192736895 73357337 + 73357317 73357357 41 CCCAACCTAGGGAGGAGGACCAGCCCGGTTCCTGTCCTGCC CCCAACCTAGGGAGGAGGACCAGCACGGTTCCTGTCCTGCC < 41bp 0.344528703096191 0.70737287002594 0.6972238 0.7802822 prediction 0.414745740051879 Functional Gain - PLEKHB1 ENSG00000021300 UTR5 Human protein_coding chr11:73357337 chr11:73357341 . . 0 25 hm5C_associated_SNPs_125983 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr11:73357340-73357360
64251 chrX 41200777 41200777 1 + A G LIHC 41200774 + 41200754 41200794 41 AGTTCAGGGTGGAGTTCTAGCAAAGATAAGGATGCGTATAG AGTTCAGGGTGGAGTTCTAGCAAGGATAAGGATGCGTATAG < 41bp 0.576612457440829 0.783978661448995 0.40241838 0.77055717 prediction 0.414732408016332 Functional Gain - DDX3X ENSG00000215301 CDS Human protein_coding chrX:41200774 chrX:41200777 synonymous SNV . 0 24 hm5C_associated_SNPs_125988 0 0 18 CSTF2T POSTAR2 GSE37401,GSM917677 chrX:41200697-41200786
64251 chr11 65392933 65392933 1 + C T BLCA 65392932 + 65392912 65392952 41 GGAGCGCAGCTTGGAGACAGCCCGGGCCGAGCCCCCGGACC GGAGCGCAGCTTGGAGACAGCTCGGGCCGAGCCCCCGGACC < 41bp 0.609510568678361 0.816874155223786 0.15645799 0.21227169 prediction 0.414727173090849 Functional Gain - PCNX3 ENSG00000197136 CDS Human protein_coding chr11:65392932 chr11:65392933 synonymous SNV . 0 22 hm5C_associated_SNPs_125991 0 0 5 BUD13 POSTAR2 ENCODE chr11:65392887-65392950
64251 chr9 34339161 34339161 1 + A G SKCM 34339158 + 34339138 34339178 41 GCATTCATCACTGGACTCCTCCCAAAGGTAGAGGCCAGAGG GCATTCATCACTGGACTCCTCCCGAAGGTAGAGGCCAGAGG < 41bp 0.60495302386097 0.812296964023961 0.24667472 0.22148705 prediction 0.414687880325982 Functional Gain - NUDT2 ENSG00000164978 CDS Human protein_coding chr9:34339158 chr9:34339161 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_125997 0 0 1 DDX55 POSTAR2 ENCODE chr9:34339124-34339161
64251 chr16 23583996 23583996 1 + C G rs569443369 23583995 + 23583975 23584015 41 TTCCATCATCTCCCCGCTCCCCAAGGGCCAACTGCTTCTCA TTCCATCATCTCCCCGCTCCCGAAGGGCCAACTGCTTCTCA < 41bp 0.398786558326344 0.707342338662525 0.86296934 0.9216323 prediction 0.41468467732505 Functional Gain - UBFD1 ENSG00000103353 UTR3 Human protein_coding chr16:23583995 chr16:23583996 . . 0 22 hm5C_associated_SNPs_125998 0 0 6 TARDBP POSTAR2 DRA001158,DRS012386 chr16:23583957-23584006
64251 chr12 56625319 56625319 1 + C T SKCM 56625318 + 56625298 56625338 41 TCTGACTGGACGGGCTGCATCCCCAGCTGCAGACAATTCCA TCTGACTGGACGGGCTGCATCTCCAGCTGCAGACAATTCCA < 41bp 0.625659627394147 0.832999141223361 0.035853773 0.93841326 prediction 0.414679027658427 Functional Gain - SLC39A5 ENSG00000139540 CDS Human protein_coding chr12:56625318 chr12:56625319 synonymous SNV . 0 22 hm5C_associated_SNPs_126000 0 0 2 PPIG POSTAR2 ENCODE chr12:56625283-56625330
64251 chr12 51318980 51318980 1 + C G UCEC 51318976 + 51318956 51318996 41 GATATACAACGAACAGATGGCAAGCAAGAAGCGGGAGCTCT GATATACAACGAACAGATGGCAAGGAAGAAGCGGGAGCTCT < 41bp 0.409141881523031 0.707338910410628 0.022119284 0.09897748 prediction 0.414677820821257 Functional Gain - METTL7A ENSG00000185432 CDS Human protein_coding chr12:51318976 chr12:51318980 nonsynonymous SNV 0.898 0 25 hm5C_associated_SNPs_126001 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:51318963-51319000
64251 chrX 30268640 30268640 1 + T A ACC 30268638 + 30268618 30268658 41 GGGGTCAGAAGAGTAAGCTCCGTGCTCGTGAGAAACGCCGC GGGGTCAGAAGAGTAAGCTCCGAGCTCGTGAGAAACGCCGC < 41bp 0.528461956792797 0.735791240721309 0.4145618 0.71045583 prediction 0.414658567857024 Functional Gain - MAGEB1 ENSG00000214107 CDS Human protein_coding chrX:30268638 chrX:30268640 synonymous SNV . 0 23 hm5C_associated_SNPs_126005 0 0 1 DDX3X POSTAR2 ENCODE chrX:30268550-30268653
64251 chr9 124533001 124533001 1 + C T SKCM 124533000 + 124532980 124533020 41 GGTGATTGAGAACGATCTTTCCGGGTAAGAGCTGCCAGCCA GGTGATTGAGAACGATCTTTCTGGGTAAGAGCTGCCAGCCA < 41bp 0.596121064200351 0.803442935297735 0.9250876 0.89280725 prediction 0.414643742194767 Functional Gain - DAB2IP ENSG00000136848 CDS Human protein_coding chr9:124533000 chr9:124533001 synonymous SNV . 0 22 hm5C_associated_SNPs_126007 0 0 2 PRPF8 POSTAR2 ENCODE chr9:124532998-124533052
64251 chr4 159603468 159603468 1 + T C GBM 159603466 + 159603446 159603486 41 TGGCACATGAAAAGGACATCCGTGTGTGTCTAGTGGAGAAA TGGCACATGAAAAGGACATCCGCGTGTGTCTAGTGGAGAAA < 41bp 0.418450358168354 0.70731974757073 0.26033068 0.27830845 prediction 0.414639495141461 Functional Gain - ETFDH ENSG00000171503 CDS Human protein_coding chr4:159603466 chr4:159603468 synonymous SNV . 0 23 hm5C_associated_SNPs_126008 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350200 chr4:159603436-159603476
64251 chr19 42814065 42814065 1 + C A SKCM 42814064 + 42814044 42814084 41 CCGCCAAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAACCA CCGCCAAGCCCTCCCCAAGCCAAGGCAGGGCCCAGGAACCA < 41bp 0.630065521765547 0.837382797316891 0.14497963 0.37191653 prediction 0.414634551102689 Functional Gain - PRR19 ENSG00000188368 CDS Human protein_coding chr19:42814064 chr19:42814065 nonsynonymous SNV 0.026 1 22 hm5C_associated_SNPs_126010 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:42814038-42814093
64251 chr9 37486603 37486603 1 + A G rs1571234 37486600 + 37486580 37486620 41 GCTTCCTTGCCATCCCCATTCTGACACTCCCTCCCAGTGAC GCTTCCTTGCCATCCCCATTCTGGCACTCCCTCCCAGTGAC < 41bp 0.440646850905889 0.707309697011089 0.058300614 0.11196804 prediction 0.414619394022179 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37486600 chr9:37486603 nonsynonymous SNV 0.000 1 24 hm5C_associated_SNPs_126013 0 0 2 DDX59 POSTAR2 ENCODE chr9:37486416-37486616
64251 chr8 6566178 6566178 1 + C A rs375237027 6566174 + 6566154 6566194 41 AGCGCAGGCGGAGCTCGCTGCCGCCGAGCTGAGAAGATGCT AGCGCAGGCGGAGCTCGCTGCCGCAGAGCTGAGAAGATGCT < 41bp 0.450482011693778 0.707305801520844 0.40705115 0.4081352 prediction 0.414611603041687 Functional Gain - AGPAT5 ENSG00000155189 UTR5 Human protein_coding chr8:6566174 chr8:6566178 . . 0 25 hm5C_associated_SNPs_126016 0 0 3 DDX3X POSTAR2 ENCODE chr8:6566113-6566203
64251 chr15 42127274 42127274 1 + C T SKCM 42127273 + 42127253 42127293 41 CCAGCTGAGCGCCGCCTGCCCCTGAGCTTCGTGCTGGATGT CCAGCTGAGCGCCGCCTGCCCTTGAGCTTCGTGCTGGATGT < 41bp 0.621686386902778 0.828990506795652 0.23920721 0.112677574 prediction 0.414608239785746 Functional Gain - JMJD7;JMJD7-PLA2G4B ENSG00000168970;ENSG00000243708;ENSG00000243789 CDS Human other chr15:42127273 chr15:42127274 synonymous SNV . 0 22 hm5C_associated_SNPs_126017 0 0 2 PPIG POSTAR2 ENCODE chr15:42127270-42127329
64251 chr2 228395887 228395887 1 + C A UCEC 228395886 + 228395866 228395906 41 TCGAGTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTCC TCGAGTAATTTTGGAGGTTTCACCACAGCAAGTCACTCTCC < 41bp 0.604020433809939 0.811322909317876 0.24175617 0.22880524 prediction 0.414604951015874 Functional Gain - AGFG1 ENSG00000173744 CDS Human protein_coding chr2:228395886 chr2:228395887 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_126018 0 0 7 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:228395871-228395893
64251 chr12 53452878 53452878 1 + C T SKCM 53452877 + 53452857 53452897 41 CTGGATGGCAGTCCTTATGCCCAGGTGCAGCGGCCTCCCCG CTGGATGGCAGTCCTTATGCCTAGGTGCAGCGGCCTCCCCG < 41bp 0.58143178251319 0.788733402509696 0.80499107 0.60000515 prediction 0.414603239993011 Functional Gain - TNS2 ENSG00000111077 CDS Human protein_coding chr12:53452877 chr12:53452878 stopgain 1.000 1 22 hm5C_associated_SNPs_126019 0 0 1 PPIG POSTAR2 ENCODE chr12:53452834-53452901
64251 chr1 40881041 40881041 1 + C A rs209606 40881040 + 40881020 40881060 41 TGTTCCATCCCCTTCTTCTTCCGGTTCCAGAAAGGTGAGTC TGTTCCATCCCCTTCTTCTTCAGGTTCCAGAAAGGTGAGTC < 41bp 0.439104038653188 0.707291022265359 0.47581425 0.82280767 prediction 0.414582044530719 Functional Gain - SMAP2 ENSG00000084070 CDS Human protein_coding chr1:40881040 chr1:40881041 synonymous SNV . 0 22 hm5C_associated_SNPs_126023 0 0 2 BUD13 POSTAR2 ENCODE chr1:40881036-40881050
64251 chr3 142525009 142525009 1 + C T HNSC 142525008 + 142524988 142525028 41 CGCCAAGATCTGTCAAAATTCCGAAATGAAATAAGGGATTT CGCCAAGATCTGTCAAAATTCTGAAATGAAATAAGGGATTT < 41bp 0.602970036555059 0.810257097737215 0.31973296 0.31040913 prediction 0.414574122364312 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142525008 chr3:142525009 stopgain 0.998 1 22 hm5C_associated_SNPs_126024 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:142524987-142525010
64251 chr19 48953673 48953673 1 + A G SKCM 48953670 + 48953650 48953690 41 TCTGCAGGTGGTGGAGGAGCCCCAGGCCCTGGCAGCCTTCC TCTGCAGGTGGTGGAGGAGCCCCGGGCCCTGGCAGCCTTCC < 41bp 0.456351474749506 0.707273195508206 0.87922955 0.8965901 prediction 0.414546391016412 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48953670 chr19:48953673 nonsynonymous SNV 0.930 0 24 hm5C_associated_SNPs_126029 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr19:48953672-48953698
64251 chr11 60703542 60703542 1 + C A rs111231672 60703538 + 60703518 60703558 41 GCTGCATGTGGCTCTGCACCCGCCCGAGCCCTGCCGCCGGG GCTGCATGTGGCTCTGCACCCGCCAGAGCCCTGCCGCCGGG < 41bp 0.721504601693045 0.92876945165968 0.055271983 0.39523908 prediction 0.414529699933271 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60703538 chr11:60703542 synonymous SNV . 0 25 hm5C_associated_SNPs_126031 0 0 2 DDX3X POSTAR2 ENCODE chr11:60703540-60703563
64251 chr22 21140399 21140399 1 + T C LAML 21140397 + 21140377 21140417 41 CTGTTTGACAAAAATGGCAACATGGCAGGCATCTCAGACCA CTGTTTGACAAAAATGGCAACACGGCAGGCATCTCAGACCA < 41bp 0.423862097577382 0.707259602054243 0.18709257 0.16532072 prediction 0.414519204108486 Functional Gain - SERPIND1 ENSG00000099937 CDS Human protein_coding chr22:21140397 chr22:21140399 nonsynonymous SNV 0.254 1 23 hm5C_associated_SNPs_126033 0 0 6 DKC1 POSTAR2 ENCODE chr22:21140399-21140420
64251 chrX 152914787 152914787 1 + C T rs73633708 152914786 + 152914766 152914806 41 GCCGGTGCCCGGTCCAGTGCCCGTGGTGGGGTTGGGCAGCC GCCGGTGCCCGGTCCAGTGCCTGTGGTGGGGTTGGGCAGCC < 41bp 0.574761184428572 0.78200863654745 0.28846246 0.18707052 prediction 0.414494904237756 Functional Gain - DUSP9 ENSG00000130829 CDS Human protein_coding chrX:152914786 chrX:152914787 synonymous SNV . 0 22 hm5C_associated_SNPs_126040 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585674 chrX:152914782-152914825
64251 chr18 77067158 77067158 1 + A G SKCM 77067155 + 77067135 77067175 41 TGAGTCTCGGGCCGGCGTTACTGAGGAGACTGAGTTCGCAG TGAGTCTCGGGCCGGCGTTACTGGGGAGACTGAGTTCGCAG < 41bp 0.605350812160313 0.812595312091335 0.56859386 0.90856165 prediction 0.414488999862045 Functional Gain - ATP9B ENSG00000166377 CDS Human protein_coding chr18:77067155 chr18:77067158 nonsynonymous SNV 0.129 0 24 hm5C_associated_SNPs_126041 0 0 1 EIF3H POSTAR2 ENCODE chr18:77067059-77067228
64251 chr16 67207894 67207894 1 + C T rs569921017 67207893 + 67207873 67207913 41 AGGCAGGAGGACACCGAGTTCCCCGTGTTGGCCTCCAGGTC AGGCAGGAGGACACCGAGTTCTCCGTGTTGGCCTCCAGGTC < 41bp 0.617351481032191 0.824593660022316 0.08673689 0.11573368 prediction 0.41448435798025 Functional Gain - NOL3 ENSG00000140939 CDS Human protein_coding chr16:67207893 chr16:67207894 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_126042 0 0 7 DDX24 POSTAR2 ENCODE chr16:67207876-67207941
64251 chr2 74441313 74441313 1 + A G rs563102398 74441310 + 74441290 74441330 41 TTATTGCTGCAAAAAAGGTGCTGAGGCTTGAAGAGCGAGAA TTATTGCTGCAAAAAAGGTGCTGGGGCTTGAAGAGCGAGAA < 41bp 0.480264566147964 0.707220362765979 0.18350232 0.23287928 prediction 0.414440725531959 Functional Gain - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74441310 chr2:74441313 nonsynonymous SNV 0.952 0 24 hm5C_associated_SNPs_126054 0 0 37 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:74441253-74441331
64251 chr10 73983738 73983738 1 + T A SKCM 73983734 + 73983714 73983754 41 TGGAAGTTCTGTCACTGGATCTGGTTTCAGTGTCTCAGACC TGGAAGTTCTGTCACTGGATCTGGATTCAGTGTCTCAGACC < 41bp 0.690407928551729 0.897628089420249 0.25325578 0.31452143 prediction 0.41444032173704 Functional Gain - ANAPC16 ENSG00000166295 CDS Human protein_coding chr10:73983734 chr10:73983738 synonymous SNV . 0 25 hm5C_associated_SNPs_126055 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917664 chr10:73983712-73983746
64251 chr18 33848581 33848581 1 + T C rs1057251 33848578 + 33848558 33848598 41 TGTAGGATCTCAGGTGCTCCCTGTGTTGAAAGAGAATGTGG TGTAGGATCTCAGGTGCTCCCTGCGTTGAAAGAGAATGTGG < 41bp 0.550676706164109 0.757890570447094 0.0408718 0.020415127 prediction 0.414427728565971 Functional Gain - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33848578 chr18:33848581 nonsynonymous SNV 0.980 1 24 hm5C_associated_SNPs_126056 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr18:33848559-33848607
64251 chr1 10003514 10003514 1 + T G rs116413132 10003511 + 10003491 10003531 41 TGCGACCGAGATGTTCCACTCGCTGGCGTCCGGGCCGCTGG TGCGACCGAGATGTTCCACTCGCGGGCGTCCGGGCCGCTGG < 41bp 0.728403104390068 0.935601345238972 0.35348573 0.9222774 prediction 0.414396481697807 Functional Gain - NMNAT1 ENSG00000228150 ncRNA_intronic Human sense_intronic chr1:10003511 chr1:10003514 . . 0 24 hm5C_associated_SNPs_126063 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:10003486-10003522
64251 chr1 10218427 10218427 1 + C T UCEC 10218426 + 10218406 10218446 41 TTCTTTAGATGTTGAGCATACCGGAGCCACCAGTGAGTTTT TTCTTTAGATGTTGAGCATACTGGAGCCACCAGTGAGTTTT < 41bp 0.456158454475184 0.707197743989636 0.7649107 0.30334562 prediction 0.414395487979272 Functional Gain - UBE4B ENSG00000130939 CDS Human protein_coding chr1:10218426 chr1:10218427 synonymous SNV . 0 22 hm5C_associated_SNPs_126064 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:10218426-10218451
64251 chr10 5948166 5948166 1 + T C KIRC 5948163 + 5948143 5948183 41 TGTGCACTGCCTCAGGAAGGCAGTGCAGGGCCGGGCTCACC TGTGCACTGCCTCAGGAAGGCAGCGCAGGGCCGGGCTCACC < 41bp 0.496799401669445 0.707196326272274 0.5973781 0.6692648 prediction 0.414392652544549 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948163 chr10:5948166 synonymous SNV . 0 24 hm5C_associated_SNPs_126065 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:5948158-5948185
64251 chr15 99671775 99671775 1 + C T rs117317703 99671774 + 99671754 99671794 41 TCGCTTTAGGCGTTGGGCCACCCGGGAGCTGTACATCCCTT TCGCTTTAGGCGTTGGGCCACTCGGGAGCTGTACATCCCTT < 41bp 0.469139672159318 0.70719559834163 0.118736535 0.13274345 prediction 0.414391196683261 Functional Gain - SYNM ENSG00000182253 CDS Human protein_coding chr15:99671774 chr15:99671775 synonymous SNV . 0 22 hm5C_associated_SNPs_126067 0 0 2 LIN28A POSTAR2 GSE44616,GSM1087848 chr15:99671759-99671777
64251 chr19 10394908 10394908 1 + C T rs5030381 10394907 + 10394887 10394927 41 CAAGGCCTCAGTCAGTGTGACCGCAGAGGACGAGGGCACCC CAAGGCCTCAGTCAGTGTGACTGCAGAGGACGAGGGCACCC < 41bp 0.622128150777023 0.829308143680111 0.09919459 0.116137356 prediction 0.414359985806177 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10394907 chr19:10394908 synonymous SNV . 0 22 hm5C_associated_SNPs_126077 0 0 3 SND1 POSTAR2 ENCODE chr19:10394879-10394931
64251 chrX 23685758 23685758 1 + C A LUSC 23685757 + 23685737 23685777 41 ACCGAAGGCTGCTTCTGCTGCCGCTACTGCTGTTCCTGCTG ACCGAAGGCTGCTTCTGCTGCAGCTACTGCTGTTCCTGCTG < 41bp 0.448004315850394 0.707174558434903 0.15875962 0.25953913 prediction 0.414349116869805 Functional Gain - PRDX4 ENSG00000123131 CDS Human protein_coding chrX:23685757 chrX:23685758 nonsynonymous SNV 0.938 0 22 hm5C_associated_SNPs_126080 0 0 19 DDX3X POSTAR2 GSE70804,GSM1819216 chrX:23685620-23685780
64251 chr7 101183309 101183309 1 + A G COAD 101183306 + 101183286 101183326 41 TTGCTCACCCTGTGCCACGACAGAGAAGGCCCACGGGCCCA TTGCTCACCCTGTGCCACGACAGGGAAGGCCCACGGGCCCA < 41bp 0.613383506782731 0.820548764339603 0.29032385 0.70860004 prediction 0.414330515113745 Functional Gain - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101183306 chr7:101183309 nonsynonymous SNV 0.734 2 24 hm5C_associated_SNPs_126084 0 0 1 SND1 POSTAR2 ENCODE chr7:101183303-101183330
64251 chr14 93151521 93151521 1 + C T rs185598587 93151520 + 93151500 93151540 41 GGCCTGAGAGCGGGAGGGGCCCGGTGGGGCCATGTCCCAGA GGCCTGAGAGCGGGAGGGGCCTGGTGGGGCCATGTCCCAGA < 41bp 0.527608259400886 0.734768387790819 0.6353088 0.8076419 prediction 0.414320256779866 Functional Gain - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93151520 chr14:93151521 unknown . 0 22 hm5C_associated_SNPs_126086 0 0 2 PRPF8 POSTAR2 ENCODE chr14:93151460-93151539
64251 chrX 65474970 65474970 1 + T G LUSC 65474967 + 65474947 65474987 41 TTCCTGGATCTATTATTCTGCAGTGGATCCCATCAAGGTAA TTCCTGGATCTATTATTCTGCAGGGGATCCCATCAAGGTAA < 41bp 0.307057732423797 0.707159687794691 0.10719958 0.8052416 prediction 0.414319375589382 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65474967 chrX:65474970 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_126087 0 0 3 RPS3 POSTAR2 ENCODE chrX:65474949-65474982
64251 chr1 25883750 25883750 1 + C G UCEC 25883746 + 25883726 25883766 41 TGCCACGCCTTCCTCTGCACCAAGCGGAAGATGGTCAGCGG TGCCACGCCTTCCTCTGCACCAAGGGGAAGATGGTCAGCGG < 41bp 0.669018491568995 0.876171554320983 0.2110093 0.8961458 prediction 0.414306125503978 Functional Gain - LDLRAP1 ENSG00000157978 CDS Human protein_coding chr1:25883746 chr1:25883750 nonsynonymous SNV 0.975 2 25 hm5C_associated_SNPs_126088 0 0 1 GRWD1 POSTAR2 ENCODE chr1:25883649-25883756
64251 chr13 24823801 24823801 1 + A G COAD 24823798 + 24823778 24823818 41 ACTCGGTTGCTGCAGACCCCCAGAAGGAAGACCGTGTGGAC ACTCGGTTGCTGCAGACCCCCAGGAGGAAGACCGTGTGGAC < 41bp 0.557729628508934 0.764873857066994 0.6464019 0.9079007 prediction 0.414288457116122 Functional Gain - SPATA13 ENSG00000182957 CDS Human protein_coding chr13:24823798 chr13:24823801 nonsynonymous SNV 0.022 0 24 hm5C_associated_SNPs_126092 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr13:24823780-24823818
64251 chr9 90344499 90344499 1 + T C UCEC 90344496 + 90344476 90344516 41 TACCTTTGAAAGGAAGAATCCTGTAAGTACAATCCCAAGTA TACCTTTGAAAGGAAGAATCCTGCAAGTACAATCCCAAGTA < 41bp 0.477946768652654 0.707142377623612 0.07024795 0.07996029 prediction 0.414284755247223 Functional Gain - CTSL ENSG00000135047 CDS Human protein_coding chr9:90344496 chr9:90344499 synonymous SNV . 0 24 hm5C_associated_SNPs_126095 0 0 4 PUM2 POSTAR2 ENCODE chr9:90344487-90344569
64251 chr2 11780446 11780446 1 + C T UCEC 11780445 + 11780425 11780465 41 TTGTGTGTCATCTGTCAGGACCGGAGCTCACTGCGCCAGAC TTGTGTGTCATCTGTCAGGACTGGAGCTCACTGCGCCAGAC < 41bp 0.466726481084213 0.707142031163013 0.8896687 0.59880024 prediction 0.414284062326027 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11780445 chr2:11780446 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126096 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr2:11780414-11780453
64251 chr15 78833599 78833599 1 + C G rs569089089 78833598 + 78833578 78833618 41 GGCCTTGGACTGAGGCTTTACCAAATAACGCTGAACACCTA GGCCTTGGACTGAGGCTTTACGAAATAACGCTGAACACCTA < 41bp 0.410504209829155 0.707141252321425 0.38535973 0.17254683 prediction 0.41428250464285 Functional Gain - PSMA4 ENSG00000041357 intronic Human protein_coding chr15:78833598 chr15:78833599 . . 0 22 hm5C_associated_SNPs_126097 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:78833564-78833651
64251 chr12 58186813 58186813 1 + T C UCEC 58186811 + 58186791 58186831 41 TTTCTGGACTTCCAGCTGGGCCTGACAGAGAAGGCTCACTC TTTCTGGACTTCCAGCTGGGCCCGACAGAGAAGGCTCACTC < 41bp 0.409972113910047 0.707130038465255 0.24076274 0.19896796 prediction 0.414260076930511 Functional Gain - TSFM ENSG00000123297 CDS Human protein_coding chr12:58186811 chr12:58186813 synonymous SNV . 0 23 hm5C_associated_SNPs_126099 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350201 chr12:58186751-58186813
64251 chr12 13061577 13061577 1 + T C UCEC 13061574 + 13061554 13061594 41 GGGGGAGGAAGCCCCTTTCCCTGTTGGTGATTCTGGGTCTG GGGGGAGGAAGCCCCTTTCCCTGCTGGTGATTCTGGGTCTG < 41bp 0.544577620338146 0.751696941664106 0.23131087 0.30392453 prediction 0.41423864265192 Functional Gain - GPRC5A ENSG00000013588 CDS Human protein_coding chr12:13061574 chr12:13061577 synonymous SNV . 0 24 hm5C_associated_SNPs_126107 0 0 2 PTBP1 POSTAR2 GSE42701,GSM1048186 chr12:13061560-13061580
64251 chr20 45354135 45354135 1 + A G UCEC 45354132 + 45354112 45354152 41 GCATCCTGCTCTCCTATGCCCTCAACTATGCACTGGCTGGT GCATCCTGCTCTCCTATGCCCTCGACTATGCACTGGCTGGT < 41bp 0.626232025556227 0.833337232978451 0.13873047 0.24463984 prediction 0.414210414844448 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45354132 chr20:45354135 nonsynonymous SNV 0.982 4 24 hm5C_associated_SNPs_126112 0 0 2 NOL12 POSTAR2 ENCODE chr20:45354096-45354162
64251 chr17 71232993 71232993 1 + A G COAD 71232990 + 71232970 71233010 41 CTGCTGGCAGGAAGACTCTTCGCAGCTGCATGGGGCTGGAG CTGCTGGCAGGAAGACTCTTCGCGGCTGCATGGGGCTGGAG < 41bp 0.621399986160309 0.828504126650773 0.26936597 0.4179638 prediction 0.414208280980929 Functional Gain - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71232990 chr17:71232993 nonsynonymous SNV 0.006 2 24 hm5C_associated_SNPs_126113 0 0 5 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr17:71232980-71233007
64251 chr20 2638796 2638796 1 + T C COAD 2638794 + 2638774 2638814 41 AGGAGGAAACAGTTAATGACCCTGAGGAGGCAGGCCACAGA AGGAGGAAACAGTTAATGACCCCGAGGAGGCAGGCCACAGA < 41bp 0.632785336633904 0.839886372794448 0.34247375 0.27963412 prediction 0.414202072321088 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2638794 chr20:2638796 synonymous SNV . 0 23 hm5C_associated_SNPs_126116 0 0 39 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:2638779-2638801
64251 chr12 56075903 56075903 1 + T A ACC 56075899 + 56075879 56075919 41 ACAGGCACCTCCAATATGAGCGGTTTGTGGTGGCTCCTGGA ACAGGCACCTCCAATATGAGCGGTATGTGGTGGCTCCTGGA < 41bp 0.38389777392951 0.707098634260545 0.31101012 0.39131364 prediction 0.41419726852109 Functional Gain - METTL7B ENSG00000170439 CDS Human protein_coding chr12:56075899 chr12:56075903 nonsynonymous SNV 0.342 4 25 hm5C_associated_SNPs_126118 0 0 1 SND1 POSTAR2 ENCODE chr12:56075898-56076026
64251 chr20 362067 362067 1 + C A rs7260693 362066 + 362046 362086 41 CCCGCGGAGCGTGGGGTCGCCCGAGTTGGGCTGGGGAAGCC CCCGCGGAGCGTGGGGTCGCCAGAGTTGGGCTGGGGAAGCC < 41bp 0.59566225003797 0.802760768625215 0.85358346 0.90948594 prediction 0.414197037174491 Functional Gain - TRIB3 ENSG00000101255 UTR5 Human protein_coding chr20:362066 chr20:362067 . . 0 22 hm5C_associated_SNPs_126119 0 0 5 CSTF2T POSTAR2 ENCODE chr20:362061-362126
64251 chr17 76094521 76094521 1 + T C GBM 76094518 + 76094498 76094538 41 CTATGGAAGGTGCCCAGAAACAGTACTGCACCCACGAGGCC CTATGGAAGGTGCCCAGAAACAGCACTGCACCCACGAGGCC < 41bp 0.552488664049089 0.759579901992186 0.5529041 0.31713936 prediction 0.414182475886194 Functional Gain - TNRC6C ENSG00000078687 CDS Human protein_coding chr17:76094518 chr17:76094521 synonymous SNV . 0 24 hm5C_associated_SNPs_126123 0 0 1 IGF2BP1 POSTAR2 ENCODE chr17:76094446-76094590
64251 chr16 28507806 28507806 1 + C T rs199677239 28507805 + 28507785 28507825 41 GACTTGGGGATCAGGGCCGACCGGGCCAGGATGGAAGAGCT GACTTGGGGATCAGGGCCGACTGGGCCAGGATGGAAGAGCT < 41bp 0.47872844044739 0.70708850138476 0.58323145 0.4760361 prediction 0.414177002769519 Functional Gain - APOBR ENSG00000184730 CDS Human protein_coding chr16:28507805 chr16:28507806 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_126125 0 0 2 LIN28B POSTAR2 ENCODE chr16:28507759-28507817
64251 chr7 150746370 150746370 1 + C A UCEC 150746366 + 150746346 150746386 41 TCCTGCGCGCCCTGGGCCGGCCCCCTGCACCGCCCGGCTTC TCCTGCGCGCCCTGGGCCGGCCCCATGCACCGCCCGGCTTC < 41bp 0.291441062968805 0.707070217720143 0.062996894 0.43334654 prediction 0.414140435440286 Functional Gain - ASIC3 ENSG00000213199 CDS Human protein_coding chr7:150746366 chr7:150746370 nonsynonymous SNV 0.009 2 25 hm5C_associated_SNPs_126133 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr7:150746344-150746372
64251 chr16 20792122 20792122 1 + C T COAD 20792121 + 20792101 20792141 41 CCAGTGGAACAAGTGGATATCCGAAAATGACTGCACACACC CCAGTGGAACAAGTGGATATCTGAAAATGACTGCACACACC < 41bp 0.62380372100687 0.83086401192474 0.29064882 0.11195615 prediction 0.414120581835742 Functional Gain - ACSM3 ENSG00000005187 CDS Human protein_coding chr16:20792121 chr16:20792122 nonsynonymous SNV 0.973 5 22 hm5C_associated_SNPs_126139 0 0 4 BUD13 POSTAR2 ENCODE chr16:20792091-20792160
64251 chr3 37323488 37323488 1 + C T SKCM 37323487 + 37323467 37323507 41 TTTGCACAGAAGCTCCAGCTCCGGGTGCCCTCCGTGGAGTC TTTGCACAGAAGCTCCAGCTCTGGGTGCCCTCCGTGGAGTC < 41bp 0.60221850679662 0.80927604376458 0.9447218 0.8073811 prediction 0.41411507393592 Functional Gain - GOLGA4 ENSG00000144674 CDS Human protein_coding chr3:37323487 chr3:37323488 nonsynonymous SNV 0.996 3 22 hm5C_associated_SNPs_126142 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:37323473-37323511
64251 chr10 13222465 13222465 1 + A G OV 13222462 + 13222442 13222482 41 GCGGCCTCGAGTATCCTCCACAGAAATGAACAAGAAAATGA GCGGCCTCGAGTATCCTCCACAGGAATGAACAAGAAAATGA < 41bp 0.471880543727395 0.707049841359293 0.18152821 0.09596938 prediction 0.414099682718587 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13222462 chr10:13222465 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_126148 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221668 chr10:13222460-13222480
64251 chr1 1469360 1469360 1 + C T UCEC 1469359 + 1469339 1469379 41 ACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCCA ACCGAGGCCATGATGGACACCTGCGTGCAAGATGCTGTCCA < 41bp 0.474666151531372 0.707046022822681 0.2031607 0.11750758 prediction 0.414092045645362 Functional Gain - ATAD3A ENSG00000197785 CDS Human protein_coding chr1:1469359 chr1:1469360 nonsynonymous SNV 0.637 1 22 hm5C_associated_SNPs_126151 0 0 1 SERBP1 POSTAR2 ENCODE chr1:1469358-1469400
64251 chr11 66264796 66264796 1 + C T LUAD 66264795 + 66264775 66264815 41 ATGCAGGCCCGGTTTGTGATCCTGAGAGTCTTGCTGGAGGC ATGCAGGCCCGGTTTGTGATCTTGAGAGTCTTGCTGGAGGC < 41bp 0.638141012318159 0.845182843076375 0.61536217 0.4410385 prediction 0.414083661516431 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66264795 chr11:66264796 synonymous SNV . 0 22 hm5C_associated_SNPs_126156 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819213 chr11:66264796-66264797
64251 chr11 67378014 67378014 1 + C T SKCM 67378013 + 67377993 67378033 41 GGCAAGCAGGGCAAGCCCCGCCTGAAGCCCCCCTTCCCCGC GGCAAGCAGGGCAAGCCCCGCTTGAAGCCCCCCTTCCCCGC < 41bp 0.640967956656345 0.84800949732986 0.09009537 0.08997846 prediction 0.41408308134703 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67378013 chr11:67378014 synonymous SNV . 0 22 hm5C_associated_SNPs_126157 0 0 5 DDX24 POSTAR2 ENCODE chr11:67377991-67378040
64251 chr1 160314557 160314557 1 + T A LUSC 160314555 + 160314535 160314575 41 GAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCCCTG GAGAGGAAGATATATATCCCCTAAAATAAAACAGCTCCCTG < 41bp 0.512326758960996 0.719367870130898 0.117504865 0.11826211 prediction 0.414082222339804 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160314555 chr1:160314557 stopgain 1.000 1 23 hm5C_associated_SNPs_126158 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:160314540-160314560
64251 chr16 3712930 3712930 1 + T C STAD 3712928 + 3712908 3712948 41 AGCACATTTCTCATCCAGGCCATGAGCTCCTCCGTCTCCTT AGCACATTTCTCATCCAGGCCACGAGCTCCTCCGTCTCCTT < 41bp 0.443619739291712 0.707040724495605 0.14358822 0.1911304 prediction 0.414081448991209 Functional Gain - TRAP1 ENSG00000126602 CDS Human protein_coding chr16:3712928 chr16:3712930 nonsynonymous SNV 0.742 0 23 hm5C_associated_SNPs_126159 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:3712902-3712952
64251 chr5 82808082 82808082 1 + C A LUAD 82808078 + 82808058 82808098 41 TTACGGGTGGCTGTCGGATGCCAGCGTGCGCCACCCTGTGA TTACGGGTGGCTGTCGGATGCCAGAGTGCGCCACCCTGTGA < 41bp 0.327316380805835 0.707039617301386 0.39161766 0.7603564 prediction 0.414079234602772 Functional Gain - VCAN ENSG00000038427 CDS Human protein_coding chr5:82808078 chr5:82808082 nonsynonymous SNV 0.998 3 25 hm5C_associated_SNPs_126160 0 0 4 GRWD1 POSTAR2 ENCODE chr5:82807935-82808171
64251 chr1 109637083 109637083 1 + T C UCEC 109637081 + 109637061 109637101 41 GCATGCTGCTGTGGCAATTGCTTGTGTTGTAATGGCCTTTT GCATGCTGCTGTGGCAATTGCTCGTGTTGTAATGGCCTTTT < 41bp 0.646772695966239 0.853809976865979 0.1332334 0.1943892 prediction 0.41407456179948 Functional Gain - TMEM167B ENSG00000215717 CDS Human protein_coding chr1:109637081 chr1:109637083 nonsynonymous SNV 0.997 3 23 hm5C_associated_SNPs_126161 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:109637065-109637093
64251 chr11 114320583 114320583 1 + T C rs75726739 114320580 + 114320560 114320600 41 GCTTATAGGGCACTTGATGACATTAGTGAAAGCATCAAAGA GCTTATAGGGCACTTGATGACATCAGTGAAAGCATCAAAGA < 41bp 0.530918069461754 0.737952089049631 0.0930081 0.11407891 prediction 0.414068039175755 Functional Gain - REXO2 ENSG00000076043 CDS Human protein_coding chr11:114320580 chr11:114320583 synonymous SNV . 0 24 hm5C_associated_SNPs_126165 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr11:114320560-114320585
64251 chr22 25844116 25844116 1 + C T rs7289954 25844115 + 25844095 25844135 41 GCCGGTTCCTTCAGGACCCGCCTCAGGGGGCACCGCGGCGG GCCGGTTCCTTCAGGACCCGCTTCAGGGGGCACCGCGGCGG < 41bp 0.494533642449921 0.707030026226831 0.30087546 0.37792975 prediction 0.414060052453663 Functional Gain - CRYBB2P1 ENSG00000100058 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr22:25844115 chr22:25844116 . . 0 22 hm5C_associated_SNPs_126168 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:25844099-25844120
64251 chr5 175772305 175772305 1 + C A LIHC 175772304 + 175772284 175772324 41 GAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGAT GAGAAGCAGATTGAGGCCTTCAGCAGCCGCCTGATCCAGAT < 41bp 0.623204663642016 0.830231433456741 0.3775818 0.5177789 prediction 0.41405353962945 Functional Gain - SIMC1 ENSG00000170085 CDS Human protein_coding chr5:175772304 chr5:175772305 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_126171 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:175772270-175772313
64251 chr6 17507928 17507928 1 + T C KIRP 17507925 + 17507905 17507945 41 AATGACGCTGCCACCTTTTACACTAACAGGGTCTTAAAGGA AATGACGCTGCCACCTTTTACACCAACAGGGTCTTAAAGGA < 41bp 0.47036996973721 0.707020377412657 0.20180795 0.19384989 prediction 0.414040754825314 Functional Gain - CAP2 ENSG00000112186 CDS Human protein_coding chr6:17507925 chr6:17507928 synonymous SNV . 0 24 hm5C_associated_SNPs_126177 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr6:17507928-17507966
64251 chr3 32915400 32915400 1 + C T SKCM 32915399 + 32915379 32915419 41 GGCCACAGCTTCATCTACCTCCAGGAGGCACTGCAGGACTC GGCCACAGCTTCATCTACCTCTAGGAGGCACTGCAGGACTC < 41bp 0.630112344715656 0.837129643139943 0.8111218 0.8409462 prediction 0.414034596848574 Functional Gain - TRIM71 ENSG00000206557 CDS Human protein_coding chr3:32915399 chr3:32915400 stopgain 1.000 1 22 hm5C_associated_SNPs_126178 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:32915380-32915400
64251 chr19 46376217 46376217 1 + C A rs3810327 46376213 + 46376193 46376233 41 GTCAGAACAGACACCAGCACCTCCCAAACTGGACGTGGGGT GTCAGAACAGACACCAGCACCTCCAAAACTGGACGTGGGGT < 41bp 0.264041427446787 0.707017217814354 0.056983173 0.97261894 prediction 0.414034435628708 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46376213 chr19:46376217 synonymous SNV . 0 25 hm5C_associated_SNPs_126179 0 0 1 RBM15 POSTAR2 ENCODE chr19:46376181-46376218
64251 chr22 29708477 29708477 1 + C T SKCM 29708476 + 29708456 29708496 41 CCCGAGGGCTGAGCCAGATTCCTGGATGTGATGGACCAGCT CCCGAGGGCTGAGCCAGATTCTTGGATGTGATGGACCAGCT < 41bp 0.543331626670458 0.750344381967488 0.24848482 0.3068911 prediction 0.41402551059406 Functional Gain - GAS2L1 ENSG00000185340 CDS Human protein_coding chr22:29708476 chr22:29708477 synonymous SNV . 0 22 hm5C_associated_SNPs_126180 0 0 1 PCBP2 POSTAR2 ENCODE chr22:29708393-29708585
64251 chr21 45114512 45114512 1 + A G rs116680951 45114509 + 45114489 45114529 41 TCGGGCTGGCGTGCAGCTCTCCCAGCCAGCCACGCTCTGCT TCGGGCTGGCGTGCAGCTCTCCCGGCCAGCCACGCTCTGCT < 41bp 0.457808323663822 0.707012449074792 0.78416073 0.88811004 prediction 0.414024898149584 Functional Gain - RRP1B ENSG00000160208 UTR3 Human protein_coding chr21:45114509 chr21:45114512 . . 0 24 hm5C_associated_SNPs_126181 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr21:45114452-45114514
64251 chr10 76910306 76910306 1 + T A KIRC 76910302 + 76910282 76910322 41 AGGAAATGGCAGGTCCTAATCAACTCTGCATTCGCCGCTGG AGGAAATGGCAGGTCCTAATCAACACTGCATTCGCCGCTGG < 41bp 0.696650946575907 0.903662376638994 0.1806817 0.41382307 prediction 0.414022860126174 Functional Gain - SAMD8 ENSG00000156671 CDS Human protein_coding chr10:76910302 chr10:76910306 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_126183 0 0 10 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr10:76910285-76910309
64251 chr20 6017775 6017775 1 + C T UCEC 6017774 + 6017754 6017794 41 TATAGTTACTATCATTATGGCCGGAAGACTGTTCAGGTGAT TATAGTTACTATCATTATGGCTGGAAGACTGTTCAGGTGAT < 41bp 0.466153053677605 0.707010234226627 0.24097964 0.22049263 prediction 0.414020468453253 Functional Gain - CRLS1 ENSG00000088766 CDS Human protein_coding chr20:6017774 chr20:6017775 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_126185 0 0 16 ZC3H7B POSTAR2 GSE38201,GSM936510 chr20:6017730-6017780
64251 chr6 4892129 4892129 1 + C A rs116726726 4892128 + 4892108 4892148 41 GCAGAAGGAGAGCACATTGACCAGAACAAACAGGACCTCTC GCAGAAGGAGAGCACATTGACAAGAACAAACAGGACCTCTC < 41bp 0.617985483259582 0.824994409112201 0.15677142 0.29031524 prediction 0.414017851705237 Functional Gain - CDYL ENSG00000153046 CDS Human protein_coding chr6:4892128 chr6:4892129 synonymous SNV . 0 22 hm5C_associated_SNPs_126186 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545207 chr6:4892120-4892140
64251 chr4 130023819 130023819 1 + C T SKCM 130023818 + 130023798 130023838 41 TTTTCCAGTGAAGCATGAGCCCGTATTTATCAGGCTGAATC TTTTCCAGTGAAGCATGAGCCTGTATTTATCAGGCTGAATC < 41bp 0.45752762806211 0.707007641061861 0.032269716 0.0406349 prediction 0.414015282123722 Functional Gain - C4orf33 ENSG00000151470 CDS Human protein_coding chr4:130023818 chr4:130023819 synonymous SNV . 0 22 hm5C_associated_SNPs_126187 0 0 2 SRSF1 POSTAR2 ENCODE chr4:130023753-130023962
64251 chr7 128505565 128505565 1 + A G LUAD 128505562 + 128505542 128505582 41 GATCCCCTCCAAGGAGCACCCATATGACGCCGCCAAGGACT GATCCCCTCCAAGGAGCACCCATGTGACGCCGCCAAGGACT < 41bp 0.469501159116915 0.707002666495738 0.00947839 0.006925732 prediction 0.414005332991477 Functional Gain - ATP6V1F ENSG00000128524 CDS Human protein_coding chr7:128505562 chr7:128505565 nonsynonymous SNV 0.848 4 24 hm5C_associated_SNPs_126190 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr7:128505560-128505580
64251 chr19 3535538 3535538 1 + C A rs8106560 3535534 + 3535514 3535554 41 TTCAGATGGGCCTGTGCATCCTGGCCAAGCGTCACCCTCAC TTCAGATGGGCCTGTGCATCCTGGACAAGCGTCACCCTCAC < 41bp 0.724656452172097 0.931655224272787 0.16297916 0.28516513 prediction 0.41399754420138 Functional Gain - FZR1 ENSG00000105325 UTR3 Human protein_coding chr19:3535534 chr19:3535538 . . 0 25 hm5C_associated_SNPs_126192 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:3535525-3535547
64251 chr11 60696263 60696263 1 + C T SKCM 60696262 + 60696242 60696282 41 GACCCTGGGGAGCAGGCCCTCCCAGTGGGGGGTGTGGAGCT GACCCTGGGGAGCAGGCCCTCTCAGTGGGGGGTGTGGAGCT < 41bp 0.448369081547163 0.706996502795732 0.33006552 0.17659733 prediction 0.413993005591465 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696262 chr11:60696263 nonsynonymous SNV 0.991 0 22 hm5C_associated_SNPs_126195 0 0 1 RPS3 POSTAR2 ENCODE chr11:60696194-60696329
64251 chr2 128459214 128459214 1 + C G rs10206957 128459213 + 128459193 128459233 41 AAGGCGGAGGAGCCCGGGGACCGGCCGGCGGAGGAGTGGCT AAGGCGGAGGAGCCCGGGGACGGGCCGGCGGAGGAGTGGCT < 41bp 0.669836764793158 0.876832658379248 0.565757 0.8572819 prediction 0.413991787172179 Functional Gain - SFT2D3 ENSG00000173349 CDS Human protein_coding chr2:128459213 chr2:128459214 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_126197 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:128459172-128459225
64251 chr12 31238022 31238022 1 + C T COAD 31238021 + 31238001 31238041 41 GGAGGAGGAGCTGGTCCTCGCCGAATACGAGAGTGATGAGG GGAGGAGGAGCTGGTCCTCGCTGAATACGAGAGTGATGAGG < 41bp 0.516473315308124 0.72346734824765 0.5034181 0.27198005 prediction 0.413988065879052 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31238021 chr12:31238022 synonymous SNV . 0 22 hm5C_associated_SNPs_126198 0 0 1 ZNF622 POSTAR2 ENCODE chr12:31237961-31238039
64251 chr19 3208890 3208890 1 + T C rs312074 3208888 + 3208868 3208908 41 CCTCCACCCCGCAGACCAGGCGTCGTGTGTGTGTGGGAGAG CCTCCACCCCGCAGACCAGGCGCCGTGTGTGTGTGGGAGAG < 41bp 0.526981175260157 0.733973626731775 0.07611436 0.06763175 prediction 0.413984902943237 Functional Gain - NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3208888 chr19:3208890 . . 0 23 hm5C_associated_SNPs_126199 0 0 13 CSTF2 POSTAR2 GSE37401,GSM917676 chr19:3208852-3208890
64251 chr2 113300127 113300127 1 + T C UCEC 113300125 + 113300105 113300145 41 AGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTCTTATGG AGCGGGCCTAGCCTAAAGCACTCGACTGACCCCTCTTATGG < 41bp 0.55871589603234 0.765693912987202 0.3046604 0.13134342 prediction 0.413956033909723 Functional Gain - POLR1B ENSG00000125630 CDS Human protein_coding chr2:113300125 chr2:113300127 nonsynonymous SNV 0.889 3 23 hm5C_associated_SNPs_126207 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:113300119-113300156
64251 chr3 97506926 97506926 1 + T C rs148745414 97506923 + 97506903 97506943 41 CTGTAAAAGTGTCTCAGTTGCTGTGTTTAGAGAACATCAAA CTGTAAAAGTGTCTCAGTTGCTGCGTTTAGAGAACATCAAA < 41bp 0.498556804856666 0.706976925877777 0.037173122 0.037248522 prediction 0.413953851755555 Functional Gain - ARL6 ENSG00000113966 CDS Human protein_coding chr3:97506923 chr3:97506926 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126209 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:97506900-97506936
64251 chr16 2256159 2256159 1 + C G BLCA 2256155 + 2256135 2256175 41 ACTGCAGGCTACGACCACACCGTGCGCTTCTGGCAGGCCCA ACTGCAGGCTACGACCACACCGTGGGCTTCTGGCAGGCCCA < 41bp 0.414499457939925 0.706973454646234 0.0724847 0.32482988 prediction 0.413946909292469 Functional Gain - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2256155 chr16:2256159 nonsynonymous SNV 0.991 4 25 hm5C_associated_SNPs_126213 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819212 chr16:2256140-2256160
64251 chr9 125760962 125760962 1 + C T UCEC 125760961 + 125760941 125760981 41 TTTCTCCTGGAGACAAAAGTCCGCGTTTGCTCACCTAATGA TTTCTCCTGGAGACAAAAGTCTGCGTTTGCTCACCTAATGA < 41bp 0.455420389320792 0.706972801605341 0.4089421 0.34007347 prediction 0.413945603210683 Functional Gain - RABGAP1 ENSG00000011454 CDS Human protein_coding chr9:125760961 chr9:125760962 nonsynonymous SNV 0.874 4 22 hm5C_associated_SNPs_126214 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:125760934-125760962
64251 chr1 3328280 3328280 1 + T G CESC 3328276 + 3328256 3328296 41 CCCTTCTCCACGGCGCCTCCCACGTTCCCCGCACTCACCCC CCCTTCTCCACGGCGCCTCCCACGGTCCCCGCACTCACCCC < 41bp 0.529165461879137 0.736121325091907 0.108502835 0.16783106 prediction 0.413911726425539 Functional Gain - PRDM16 ENSG00000142611 CDS Human protein_coding chr1:3328276 chr1:3328280 nonsynonymous SNV 0.042 2 25 hm5C_associated_SNPs_126216 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:3328241-3328287
64251 chr3 101298839 101298839 1 + T G LUAD 101298837 + 101298817 101298857 41 CATCAGCCATATCCATCAAACTTGGATCAAGTGTGAGTTGT CATCAGCCATATCCATCAAACTGGGATCAAGTGTGAGTTGT < 41bp 0.378783542008488 0.706952045175516 0.040373117 0.14380282 prediction 0.413904090351032 Functional Gain - PCNP ENSG00000081154 CDS Human protein_coding chr3:101298837 chr3:101298839 synonymous SNV . 0 23 hm5C_associated_SNPs_126218 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:101298757-101298844
64251 chr9 131233599 131233599 1 + A G LUSC 131233596 + 131233576 131233616 41 CCCCTGCTCAGGTCAAGATGCAAAAAGGTGAGCGCCAGATG CCCCTGCTCAGGTCAAGATGCAAGAAGGTGAGCGCCAGATG < 41bp 0.566390662248047 0.773332474761291 0.12149942 0.31997728 prediction 0.413883625026488 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131233596 chr9:131233599 nonsynonymous SNV 0.976 1 24 hm5C_associated_SNPs_126219 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr9:131233587-131233613
64251 chr19 42729920 42729920 1 + C T SKCM 42729919 + 42729899 42729939 41 CAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACCGGC CAAGTCCTTTGCCTCAGCTTCTCGGCTGTCCCGGCACCGGC < 41bp 0.59485125950729 0.801785470272233 0.27816957 0.12267065 prediction 0.413868421529886 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42729919 chr19:42729920 synonymous SNV . 0 22 hm5C_associated_SNPs_126220 0 0 2 RBM15 POSTAR2 ENCODE chr19:42729889-42729947
64251 chr1 150280549 150280549 1 + C T UCEC 150280548 + 150280528 150280568 41 TATTATGAGAAGCCATGCCGCCGGCGACAGAGGGAAAGCTA TATTATGAGAAGCCATGCCGCTGGCGACAGAGGGAAAGCTA < 41bp 0.564994782942998 0.771914479960706 0.52613807 0.26148114 prediction 0.413839394035417 Functional Gain - MRPS21 ENSG00000187145 CDS Human other chr1:150280548 chr1:150280549 nonsynonymous SNV 0.618 1 22 hm5C_associated_SNPs_126224 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:150280491-150280593
64251 chr16 58537758 58537758 1 + C T SKCM 58537757 + 58537737 58537777 41 TGTAGTGATCCGGGGCTCCCCCAAGGGGAACCGCCCAGCCA TGTAGTGATCCGGGGCTCCCCTAAGGGGAACCGCCCAGCCA < 41bp 0.623432161595745 0.830343887906532 0.7421365 0.42823884 prediction 0.413823452621573 Functional Gain - NDRG4 ENSG00000103034 CDS Human protein_coding chr16:58537757 chr16:58537758 synonymous SNV . 0 22 hm5C_associated_SNPs_126230 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr16:58537740-58537760
64251 chr2 238990707 238990707 1 + C G rs142210384 238990704 + 238990684 238990724 41 AGCCTGTCCCTGAAATCAGTCAGCGCATTAAAGCCCTGAAC AGCCTGTCCCTGAAATCAGTCAGGGCATTAAAGCCCTGAAC < 41bp 0.495014164193232 0.706910550501023 0.39700097 0.8959841 prediction 0.413821101002046 Functional Gain - SCLY ENSG00000132330 CDS Human protein_coding chr2:238990704 chr2:238990707 nonsynonymous SNV 0.015 1 24 hm5C_associated_SNPs_126231 0 0 2 PPIG POSTAR2 ENCODE chr2:238990700-238990792
64251 chrX 24483604 24483604 1 + C T STAD 24483603 + 24483583 24483623 41 TCCGGTGGCTGCTGAAGCAGCCGGTGCCCAAGCAGATCGAG TCCGGTGGCTGCTGAAGCAGCTGGTGCCCAAGCAGATCGAG < 41bp 0.5253174105913 0.732219659983517 0.76667845 0.71207356 prediction 0.413804498784434 Functional Gain - PDK3 ENSG00000067992 CDS Human protein_coding chrX:24483603 chrX:24483604 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_126236 0 0 1 DDX3X POSTAR2 ENCODE chrX:24483545-24483606
64251 chr1 45243769 45243769 1 + T C UCEC 45243767 + 45243747 45243787 41 AATGCCAAAATCAGCAGTCTCCTGGAGGAGCAGTTCCAGCA AATGCCAAAATCAGCAGTCTCCCGGAGGAGCAGTTCCAGCA < 41bp 0.434538919202005 0.70689936119116 0.4579322 0.8282938 prediction 0.413798722382319 Functional Gain - RPS8 ENSG00000142937 CDS Human protein_coding chr1:45243767 chr1:45243769 nonsynonymous SNV 0.959 4 23 hm5C_associated_SNPs_126238 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:45243700-45243891
64251 chrX 21875005 21875005 1 + C T BLCA 21875004 + 21874984 21875024 41 GCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAGCC GCATCAACATCAACATCAACCTAGAGCCGCAGCAAAAAGCC < 41bp 0.572556761403283 0.779453229700917 0.13278845 0.088529974 prediction 0.413792936595268 Functional Gain - YY2 ENSG00000230797 CDS Human protein_coding chrX:21875004 chrX:21875005 stopgain 0.000 0 22 hm5C_associated_SNPs_126240 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:21874975-21875006
64251 chr16 2134479 2134479 1 + A G rs562443546 2134476 + 2134456 2134496 41 CCCTGAGGTTAAGGCCCGGTCACAGTCAGGGACCCTGGACG CCCTGAGGTTAAGGCCCGGTCACGGTCAGGGACCCTGGACG < 41bp 0.609823708516218 0.816707256143682 0.06981847 0.24187976 prediction 0.413767095254926 Functional Gain - TSC2 ENSG00000103197 CDS Human protein_coding chr16:2134476 chr16:2134479 nonsynonymous SNV 0.892 3 24 hm5C_associated_SNPs_126244 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:2134478-2134513
64251 chr1 154227697 154227697 1 + T C STAD 154227694 + 154227674 154227714 41 CATCCCCCCTCTCAATGAAACGGTATCTGCAGCTTCCTTAC CATCCCCCCTCTCAATGAAACGGCATCTGCAGCTTCCTTAC < 41bp 0.527719179006347 0.7345942190993 0.15986097 0.1201337 prediction 0.413750080185905 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154227694 chr1:154227697 nonsynonymous SNV 0.995 0 24 hm5C_associated_SNPs_126248 0 0 22 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:154227647-154227751
64251 chr3 52521557 52521557 1 + C T UCEC 52521556 + 52521536 52521576 41 GGAAGAGGAGGATGAAGAGGCCGAGGAGGAGCGCCTGGCTC GGAAGAGGAGGATGAAGAGGCTGAGGAGGAGCGCCTGGCTC < 41bp 0.567508733258484 0.774383646827613 0.8829646 0.8862823 prediction 0.413749827138258 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52521556 chr3:52521557 synonymous SNV . 0 22 hm5C_associated_SNPs_126249 0 0 10 AGGF1 POSTAR2 ENCODE chr3:52521493-52521598
64251 chr3 49568839 49568839 1 + A G GBM 49568836 + 49568816 49568856 41 GCTACCCTGTGGTGGGTTGGCACATCGCCAATAAGAAGCCC GCTACCCTGTGGTGGGTTGGCACGTCGCCAATAAGAAGCCC < 41bp 0.483122340942183 0.706873671259438 0.20470539 0.27850673 prediction 0.413747342518877 Functional Gain - DAG1 ENSG00000173402 CDS Human protein_coding chr3:49568836 chr3:49568839 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_126251 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:49568802-49568841
64251 chr16 72107846 72107846 1 + T C LUSC 72107843 + 72107823 72107863 41 GGGGACGACAGCTTTTTGCACTGTACTCAGGCAATGATGTC GGGGACGACAGCTTTTTGCACTGCACTCAGGCAATGATGTC < 41bp 0.550969611592201 0.757825196362786 0.21640149 0.10021907 prediction 0.413711169541171 Functional Gain - HPR ENSG00000261701 CDS Human protein_coding chr16:72107843 chr16:72107846 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_126263 0 0 1 U2AF2 POSTAR2 ENCODE chr16:72107778-72107849
64251 chr19 17417117 17417117 1 + C G BLCA 17417116 + 17417096 17417136 41 AAGCACGGCTGGGTCCGGCGCCTGAGCACGCCGGCCGGCGT AAGCACGGCTGGGTCCGGCGCGTGAGCACGCCGGCCGGCGT < 41bp 0.690919053449077 0.897773284650101 0.5983342 0.7543165 prediction 0.413708462402049 Functional Gain - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417116 chr19:17417117 nonsynonymous SNV 0.937 1 22 hm5C_associated_SNPs_126264 0 0 2 RTCB POSTAR2 GSE38201,GSM936508 chr19:17417089-17417117
64251 chr16 72094132 72094132 1 + T G rs588482 72094128 + 72094108 72094148 41 TTCCCACCATAATCTCACCACAGGTGCCACGCTGATCAATG TTCCCACCATAATCTCACCACAGGGGCCACGCTGATCAATG < 41bp 0.515969980798252 0.722819767805046 0.526164 0.7882745 prediction 0.413699574013589 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094128 chr16:72094132 synonymous SNV . 0 25 hm5C_associated_SNPs_126266 0 0 4 RPS3 POSTAR2 ENCODE chr16:72094103-72094143
64251 chr19 14041641 14041641 1 + A G rs113020904 14041638 + 14041618 14041658 41 CCCCAGGGGCGTCGACCTGGCCCAGCTGGGTCCCCAGGGCC CCCCAGGGGCGTCGACCTGGCCCGGCTGGGTCCCCAGGGCC < 41bp 0.528437020245082 0.735285951892695 0.03345564 0.111730844 prediction 0.413697863295226 Functional Gain - CC2D1A ENSG00000132024 UTR3 Human protein_coding chr19:14041638 chr19:14041641 . . 0 24 hm5C_associated_SNPs_126268 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:14041621-14041654
64251 chr22 21213632 21213632 1 + C G rs144160898 21213628 + 21213608 21213648 41 CGAGAAGGTTGGGGTCGCCTCTTCCGAGGTGAGCCTGGGGC CGAGAAGGTTGGGGTCGCCTCTTCGGAGGTGAGCCTGGGGC < 41bp 0.4215981658239 0.706848061719713 0.09244743 0.20749417 prediction 0.413696123439427 Functional Gain - SNAP29 ENSG00000099940 CDS Human protein_coding chr22:21213628 chr22:21213632 synonymous SNV . 0 25 hm5C_associated_SNPs_126270 1 0 5 BUD13 POSTAR2 ENCODE chr22:21213598-21213672
64251 chr22 32894316 32894316 1 + T C STAD 32894313 + 32894293 32894333 41 GACCAAAGACCAACACTTCCCTATGTTGGAGACCCAATCAG GACCAAAGACCAACACTTCCCTACGTTGGAGACCCAATCAG < 41bp 0.499675208429071 0.706843647288725 0.041423053 0.062020123 prediction 0.413687294577449 Functional Gain - FBXO7 ENSG00000100225 CDS Human protein_coding chr22:32894313 chr22:32894316 synonymous SNV . 0 24 hm5C_associated_SNPs_126273 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:32894304-32894333
64251 chrX 102612760 102612760 1 + A G STAD 102612757 + 102612737 102612777 41 AAGGAACTTTTAGAGAAAGGCTGATTCAATCTCTCCAGGAG AAGGAACTTTTAGAGAAAGGCTGGTTCAATCTCTCCAGGAG < 41bp 0.479105907025958 0.706843495544293 0.035686463 0.081632525 prediction 0.413686991088587 Functional Gain - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612757 chrX:102612760 nonsynonymous SNV 0.976 0 24 hm5C_associated_SNPs_126275 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chrX:102612734-102612784
64251 chr16 30762550 30762550 1 + C T SKCM 30762549 + 30762529 30762569 41 GCTGGAGGAGGTGCGGGAAGCCACACGGCGAGAGACACACA GCTGGAGGAGGTGCGGGAAGCTACACGGCGAGAGACACACA < 41bp 0.641573564108954 0.848408604705295 0.8880594 0.9024957 prediction 0.413670081192681 Functional Gain - PHKG2 ENSG00000156873 CDS Human protein_coding chr16:30762549 chr16:30762550 synonymous SNV . 0 22 hm5C_associated_SNPs_126278 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:30762511-30762560
64251 chr20 45362986 45362986 1 + T C rs111352987 45362984 + 45362964 45363004 41 GTTGCCCAGGCTGGCCTGATCTTGGCTCACTGCAACCTCCA GTTGCCCAGGCTGGCCTGATCTCGGCTCACTGCAACCTCCA < 41bp 0.516414682239368 0.723241420336609 0.22218925 0.6956056 prediction 0.413653476194483 Functional Gain - SLC2A10 ENSG00000197496 UTR3 Human protein_coding chr20:45362984 chr20:45362986 . . 0 23 hm5C_associated_SNPs_126282 1 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr20:45362962-45362989
64251 chr2 74757418 74757418 1 + C A ESCA 74757417 + 74757397 74757437 41 AGATACCAGGACCCGGGAGGCCTCAGAGAACTCTGGAACCC AGATACCAGGACCCGGGAGGCATCAGAGAACTCTGGAACCC < 41bp 0.606363983332197 0.813188276621301 0.39148146 0.6942624 prediction 0.413648586578209 Functional Gain - HTRA2 ENSG00000115317 CDS Human protein_coding chr2:74757417 chr2:74757418 synonymous SNV . 0 22 hm5C_associated_SNPs_126283 0 0 4 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:74757398-74757422
64251 chr19 54965698 54965698 1 + C T HNSC 54965697 + 54965677 54965717 41 GCCCCCTCAGCCCTCAAATCCCCCACATGGGGCTCACACGC GCCCCCTCAGCCCTCAAATCCTCCACATGGGGCTCACACGC < 41bp 0.431704720498667 0.706813027780606 0.06672943 0.9514854 prediction 0.413626055561212 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54965697 chr19:54965698 synonymous SNV . 0 22 hm5C_associated_SNPs_126293 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54965669-54965729
64251 chr3 93699285 93699285 1 + C G rs572660435 93699284 + 93699264 93699304 41 CGGGATGTTCAGTCTGATGGCCAGTTGCTGCGGCTGGTTCA CGGGATGTTCAGTCTGATGGCGAGTTGCTGCGGCTGGTTCA < 41bp 0.617982034975895 0.824792929528535 0.31791434 0.54994637 prediction 0.413621789105279 Functional Gain - ARL13B ENSG00000169379 CDS Human protein_coding chr3:93699284 chr3:93699285 synonymous SNV . 0 22 hm5C_associated_SNPs_126294 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:93699273-93699299
64251 chr9 134098239 134098239 1 + A G UCEC 134098236 + 134098216 134098256 41 CCAGCTCGTCGTTTGGAGAGCAGAAACCCACTGGCACTTTC CCAGCTCGTCGTTTGGAGAGCAGGAACCCACTGGCACTTTC < 41bp 0.480168244118629 0.706808289356794 0.27186605 0.4259854 prediction 0.413616578713588 Functional Gain - NUP214 ENSG00000126883 CDS Human protein_coding chr9:134098236 chr9:134098239 nonsynonymous SNV 0.903 4 24 hm5C_associated_SNPs_126296 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr9:134098218-134098247
64251 chr1 100606500 100606500 1 + T C LUSC 100606498 + 100606478 100606518 41 CGGGAAAGGGAAAATTATCTCATTGGGTTGATATTGCCTTA CGGGAAAGGGAAAATTATCTCACTGGGTTGATATTGCCTTA < 41bp 0.429299482636627 0.70680680652406 0.24528557 0.25058725 prediction 0.41361361304812 Functional Gain - TRMT13 ENSG00000122435 CDS Human protein_coding chr1:100606498 chr1:100606500 synonymous SNV . 0 23 hm5C_associated_SNPs_126297 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:100606487-100606502
64251 chr16 10851880 10851880 1 + C T LUAD 10851879 + 10851859 10851899 41 GAGCAGTGATCATCACCACTCCCCAGGTGAGCGAGCTGCCA GAGCAGTGATCATCACCACTCTCCAGGTGAGCGAGCTGCCA < 41bp 0.651803118063323 0.858600519534822 0.37612396 0.9288957 prediction 0.413594802942997 Functional Gain - NUBP1 ENSG00000103274 CDS Human protein_coding chr16:10851879 chr16:10851880 nonsynonymous SNV 0.547 4 22 hm5C_associated_SNPs_126302 0 0 3 BUD13 POSTAR2 ENCODE chr16:10851862-10851896
64251 chr15 68583382 68583382 1 + C T rs34021140 68583381 + 68583361 68583401 41 CATCATTAGCCTAGTTGAAGCCGGAGCTCACACTGACATGA CATCATTAGCCTAGTTGAAGCTGGAGCTCACACTGACATGA < 41bp 0.584805415374661 0.791601257195892 0.33375788 0.13917336 prediction 0.413591683642462 Functional Gain - FEM1B ENSG00000169018 CDS Human protein_coding chr15:68583381 chr15:68583382 synonymous SNV . 0 22 hm5C_associated_SNPs_126303 0 0 18 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr15:68583340-68583440
64251 chr3 141006210 141006210 1 + C T LUAD 141006209 + 141006189 141006229 41 TAGTCACATGTCAAAAGGATCCGGAGCCTCTTTCGAAAGCC TAGTCACATGTCAAAAGGATCTGGAGCCTCTTTCGAAAGCC < 41bp 0.625060438928581 0.831854335372826 0.12634891 0.18877795 prediction 0.413587792888491 Functional Gain - PXYLP1 ENSG00000155893 CDS Human protein_coding chr3:141006209 chr3:141006210 synonymous SNV . 0 22 hm5C_associated_SNPs_126304 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr3:141006187-141006216
64251 chr12 122079333 122079333 1 + C T COAD 122079332 + 122079312 122079352 41 CGTCAGCACCAGCGGCATCACCCCGGGCCAGGCAGCTGCCA CGTCAGCACCAGCGGCATCACTCCGGGCCAGGCAGCTGCCA < 41bp 0.613848441062189 0.820639325381595 0.42782384 0.57941186 prediction 0.413581768638812 Functional Gain - ORAI1 ENSG00000182500 CDS Human other chr12:122079332 chr12:122079333 synonymous SNV . 0 22 hm5C_associated_SNPs_126307 0 0 1 YBX3 POSTAR2 ENCODE chr12:122079321-122079459
64251 chr12 123889509 123889509 1 + C T OV 123889508 + 123889488 123889528 41 GGTGACTTTGTGGTGGAATACCACGGGGACCTCATCGAGAT GGTGACTTTGTGGTGGAATACTACGGGGACCTCATCGAGAT < 41bp 0.641000081962497 0.84778214627556 0.266259 0.2578686 prediction 0.413564128626125 Functional Gain - KMT5A ENSG00000183955 CDS Human protein_coding chr12:123889508 chr12:123889509 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_126310 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:123889476-123889520
64251 chr5 172410879 172410879 1 + C G THCA 172410878 + 172410858 172410898 41 GCGACCATGGCGTATCACGGCCTCACTGTGCCTCTCATTGT GCGACCATGGCGTATCACGGCGTCACTGTGCCTCTCATTGT < 41bp 0.394718226360453 0.706781755460537 0.06439406 0.18326962 prediction 0.413563510921074 Functional Gain - ATP6V0E1 ENSG00000113732 CDS Human protein_coding chr5:172410878 chr5:172410879 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_126311 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819211 chr5:172410840-172410880
64251 chr6 7576572 7576572 1 + T C LUAD 7576570 + 7576550 7576590 41 TCAAGCAATTGAGGAATTATCGTGATAACTATCAGGCTTTC TCAAGCAATTGAGGAATTATCGCGATAACTATCAGGCTTTC < 41bp 0.661964457944931 0.868741533296984 0.8815808 0.90766716 prediction 0.413554150704105 Functional Gain - DSP ENSG00000096696 CDS Human protein_coding chr6:7576570 chr6:7576572 synonymous SNV . 0 23 hm5C_associated_SNPs_126312 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr6:7576542-7576605
64251 chr9 404984 404984 1 + T G STAD 404981 + 404961 405001 41 GGCTAGAGTTCCTGAGAATCCTCTGTAGCCATGAGCATTAC GGCTAGAGTTCCTGAGAATCCTCGGTAGCCATGAGCATTAC < 41bp 0.345456699639206 0.706776846191283 0.039749086 0.065280944 prediction 0.413553692382565 Functional Gain - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:404981 chr9:404984 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_126313 0 0 1 YBX3 POSTAR2 ENCODE chr9:404917-404986
64251 chr2 192550393 192550393 1 + C T SKCM 192550392 + 192550372 192550412 41 CATGCTGGCAGAAGCAATGGCCGGGGACTTATAAATCCACA CATGCTGGCAGAAGCAATGGCTGGGGACTTATAAATCCACA < 41bp 0.564512568588814 0.771287891792394 0.1541121 0.0475007 prediction 0.41355064640716 Functional Gain - NABP1 ENSG00000173559 CDS Human protein_coding chr2:192550392 chr2:192550393 nonsynonymous SNV 0.927 1 22 hm5C_associated_SNPs_126314 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr2:192550384-192550400
64251 chr5 179264132 179264132 1 + T G rs1060271 179264128 + 179264108 179264148 41 GTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAG GTTTCACTGAGAGCTGCCTCCTGGGCTCTTCACCACTGTAG < 41bp 0.532661401655299 0.739432376150221 0.09488419 0.20477933 prediction 0.413541948989844 Functional Gain - SQSTM1 ENSG00000161010;ENSG00000161011 UTR3 Human other chr5:179264128 chr5:179264132 . . 0 25 hm5C_associated_SNPs_126320 1 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr5:179264100-179264160
64251 chrX 100356138 100356138 1 + C G UCEC 100356134 + 100356114 100356154 41 GGTAGTAGTAGTTTTCAGACCACGCTTTCAGCCTGGAAAGT GGTAGTAGTAGTTTTCAGACCACGGTTTCAGCCTGGAAAGT < 41bp 0.42877213481678 0.70676759956148 0.05169514 0.19930413 prediction 0.41353519912296 Functional Gain - CENPI ENSG00000102384 CDS Human protein_coding chrX:100356134 chrX:100356138 nonsynonymous SNV 0.023 4 25 hm5C_associated_SNPs_126321 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:100356061-100356140
64251 chr4 110740179 110740179 1 + A G UCEC 110740176 + 110740156 110740196 41 GTATTTTTCAGTTAAGTTGTCAGAAAACATGAAGGCTTCAT GTATTTTTCAGTTAAGTTGTCAGGAAACATGAAGGCTTCAT < 41bp 0.489681791415035 0.706767499852482 0.24596831 0.39149642 prediction 0.413534999704964 Functional Gain - GAR1 ENSG00000109534 CDS Human protein_coding chr4:110740176 chr4:110740179 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_126322 0 0 8 SRRM4 POSTAR2 GSE57278,GSM1378374 chr4:110740160-110740180
64251 chr11 95523848 95523848 1 + T G rs201769882 95523846 + 95523826 95523866 41 CCCCCGAAGTGCGGAGACCCCCTGGGCAGGCTGAAAGATGG CCCCCGAAGTGCGGAGACCCCCGGGGCAGGCTGAAAGATGG < 41bp 0.674006224026386 0.880769600056515 0.07338986 0.89809144 prediction 0.413526752060259 Functional Gain - CEP57 ENSG00000166037 UTR5 Human protein_coding chr11:95523846 chr11:95523848 . . 0 23 hm5C_associated_SNPs_126325 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr11:95523832-95523859
64251 chr11 43364131 43364131 1 + C T STAD 43364130 + 43364110 43364150 41 TTCTACTACTCATTGGATTGCCGGGGATGTCCCTTTAAACA TTCTACTACTCATTGGATTGCTGGGGATGTCCCTTTAAACA < 41bp 0.544676464145774 0.751427780662799 0.92454064 0.48305175 prediction 0.413502633034049 Functional Gain - API5 ENSG00000166181 CDS Human protein_coding chr11:43364130 chr11:43364131 synonymous SNV . 0 22 hm5C_associated_SNPs_126330 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:43364087-43364154
64251 chr18 2740798 2740798 1 + A G rs115632137 2740795 + 2740775 2740815 41 GCTGGGGTTGGACTTGATAGCTCAAATTTGAAAACAACCTT GCTGGGGTTGGACTTGATAGCTCGAATTTGAAAACAACCTT < 41bp 0.541887283546493 0.748630043230918 0.18839756 0.15345433 prediction 0.41348551936885 Functional Gain - SMCHD1 ENSG00000101596 CDS Human protein_coding chr18:2740795 chr18:2740798 synonymous SNV . 0 24 hm5C_associated_SNPs_126333 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:2740737-2740798
64251 chr17 4623752 4623752 1 + C T SKCM 4623751 + 4623731 4623771 41 CCCCACGACCACATCCCCCTCCCCAGACCCCAGTCAGGTGA CCCCACGACCACATCCCCCTCTCCAGACCCCAGTCAGGTGA < 41bp 0.659843495549748 0.866583714267182 0.070124894 0.9574077 prediction 0.413480437434869 Functional Gain - ARRB2 ENSG00000141480 CDS Human protein_coding chr17:4623751 chr17:4623752 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_126334 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:4623737-4623765
64251 chr22 42907831 42907831 1 - G A rs139433212 42907832 - 42907812 42907852 41 CAGGGTTGCTGTGATTGTATCCGAAGTAGTCCTCGTGAGAA CAGGGTTGCTGTGATTGTATCTGAAGTAGTCCTCGTGAGAA < 41bp 0.496568521261982 0.70673891508445 0.40011793 0.26547462 prediction 0.413477830168899 Functional Gain - SERHL ENSG00000172250 ncRNA_exonic Human processed_transcript chr22:42907832 chr22:42907831 . . 0 22 hm5C_associated_SNPs_126336 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917665 chr22:42907772-42907837
64251 chr15 58855834 58855834 1 + C T GBM 58855833 + 58855813 58855853 41 GCCAATGTCTGGGACACGGTCCAGACCATCATCCCATGGAG GCCAATGTCTGGGACACGGTCTAGACCATCATCCCATGGAG < 41bp 0.640940389740404 0.847672936452977 0.17934528 0.3121065 prediction 0.413465093425146 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58855833 chr15:58855834 stopgain 0.846 1 22 hm5C_associated_SNPs_126338 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr15:58855820-58855840
64251 chr9 127089635 127089635 1 + T C LAML 127089633 + 127089613 127089653 41 GCAGACATCAAGCCTGCCAACGTGTTCATCACAGCCACGGG GCAGACATCAAGCCTGCCAACGCGTTCATCACAGCCACGGG < 41bp 0.432067428257172 0.706728570443892 0.13285679 0.17857337 prediction 0.413457140887784 Functional Gain - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127089633 chr9:127089635 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_126340 0 0 3 BUD13 POSTAR2 ENCODE chr9:127089584-127089637
64251 chr21 35515081 35515081 1 + T G rs572873802 35515078 + 35515058 35515098 41 GCGAGAGGTGGGGAACTGCTCACTGACAGCTTCTCTGTAAC GCGAGAGGTGGGGAACTGCTCACGGACAGCTTCTCTGTAAC < 41bp 0.721699773720959 0.928426507759982 0.18814075 0.42199114 prediction 0.413453468078046 Functional Gain - MRPS6 ENSG00000272657 ncRNA_intronic Human processed_transcript chr21:35515078 chr21:35515081 . . 0 24 hm5C_associated_SNPs_126342 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr21:35515044-35515104
64251 chr18 34415329 34415329 1 + T C HNSC 34415326 + 34415306 34415346 41 CTTAAAAGGCACAGGAGATTCAGTAGATGAACAGGTTAGTA CTTAAAAGGCACAGGAGATTCAGCAGATGAACAGGTTAGTA < 41bp 0.536006739311759 0.742723618844299 0.4539535 0.910205 prediction 0.413433759065079 Functional Gain - KIAA1328 ENSG00000150477 CDS Human protein_coding chr18:34415326 chr18:34415329 nonsynonymous SNV 0.937 0 24 hm5C_associated_SNPs_126344 0 0 2 PPIG POSTAR2 ENCODE chr18:34415196-34415340
64251 chr19 7977267 7977267 1 + C T GBM 7977266 + 7977246 7977286 41 TCATGGCGAAGACTGAGTCACCGCGGACTAGCGGCGTCCTG TCATGGCGAAGACTGAGTCACTGCGGACTAGCGGCGTCCTG < 41bp 0.465120024497901 0.70671637599925 0.36408055 0.35376713 prediction 0.413432751998501 Functional Gain - MAP2K7 ENSG00000076984 CDS Human protein_coding chr19:7977266 chr19:7977267 nonsynonymous SNV 0.432 2 22 hm5C_associated_SNPs_126345 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:7977256-7977290
64251 chr19 47258815 47258815 1 + C T SKCM 47258814 + 47258794 47258834 41 CCAGCCTAGGAATTCCCGGGCCCGGGGGCCCCGTCGTGCCT CCAGCCTAGGAATTCCCGGGCTCGGGGGCCCCGTCGTGCCT < 41bp 0.597221724228026 0.803925616588712 0.6570319 0.29572463 prediction 0.413407784721372 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258814 chr19:47258815 synonymous SNV . 0 22 hm5C_associated_SNPs_126348 0 0 3 RTCB POSTAR2 GSE38201,GSM936508 chr19:47258813-47258835
64251 chr2 28627205 28627205 1 + C T UCEC 28627204 + 28627184 28627224 41 ACCATTGGCACCACCGTGGGCCGCAGGAGGAGAGATGAGCA ACCATTGGCACCACCGTGGGCTGCAGGAGGAGAGATGAGCA < 41bp 0.444923635578002 0.706699749800305 0.678188 0.6487727 prediction 0.413399499600611 Functional Gain - FOSL2 ENSG00000075426 CDS Human protein_coding chr2:28627204 chr2:28627205 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_126350 0 0 3 BUD13 POSTAR2 ENCODE chr2:28627170-28627251
64251 chr9 131004517 131004517 1 + C T BRCA 131004516 + 131004496 131004536 41 CCCATCACCCTCCAGGTCATCCGCAAGGGCTGGCTGACTAT CCCATCACCCTCCAGGTCATCTGCAAGGGCTGGCTGACTAT < 41bp 0.43716966516866 0.70669905420084 0.026596248 0.38743556 prediction 0.41339810840168 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131004516 chr9:131004517 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_126351 0 0 9 BUD13 POSTAR2 ENCODE chr9:131004506-131004541
64251 chr3 73114753 73114753 1 + T C KICH 73114751 + 73114731 73114771 41 GTAGTAGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTA GTAGTAGTTCTTCTGACTGCCGCGAAACAGAAGAATTAGTA < 41bp 0.656784338643604 0.863481033670082 0.17088968 0.19733319 prediction 0.413393390052955 Functional Gain - PPP4R2 ENSG00000163605 CDS Human protein_coding chr3:73114751 chr3:73114753 synonymous SNV . 0 23 hm5C_associated_SNPs_126354 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:73114682-73114755
64251 chr20 62906919 62906919 1 + C A rs150992961 62906918 + 62906898 62906938 41 GTCAGTGTGTGATTTTTAAACCGGAATTTGGTTTAAAAAAA GTCAGTGTGTGATTTTTAAACAGGAATTTGGTTTAAAAAAA < 41bp 0.581935371430699 0.788624734872564 0.19544616 0.43998036 prediction 0.41337872688373 Functional Gain - PCMTD2 ENSG00000203880 UTR3 Human protein_coding chr20:62906918 chr20:62906919 . . 0 22 hm5C_associated_SNPs_126357 0 0 18 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62906828-62906980
64251 chr16 68260340 68260340 1 + A G UCEC 68260337 + 68260317 68260357 41 GCAGGCTCCCCTCCCGAGTCCTGAGTCCCTGGATTTAGGAA GCAGGCTCCCCTCCCGAGTCCTGGGTCCCTGGATTTAGGAA < 41bp 0.493677856186223 0.706688209427876 0.18786249 0.38693243 prediction 0.413376418855752 Functional Gain - NFATC3 ENSG00000072736 CDS Human protein_coding chr16:68260337 chr16:68260340 nonsynonymous SNV 0.097 0 24 hm5C_associated_SNPs_126358 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:68260306-68260347
64251 chrX 107084157 107084157 1 + C T UCEC 107084156 + 107084136 107084176 41 TATGTTATCTCGCTGAACCACCGGGGCCTGGATGGCCTCAA TATGTTATCTCGCTGAACCACTGGGGCCTGGATGGCCTCAA < 41bp 0.60832037911441 0.815005254564226 0.869448 0.6647728 prediction 0.413369750899633 Functional Gain - MID2 ENSG00000080561 CDS Human protein_coding chrX:107084156 chrX:107084157 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126360 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:107084140-107084160
64251 chr10 13234263 13234263 1 + C T HNSC 13234262 + 13234242 13234282 41 TGACCTGGCACAGGAATACCCCAGAAGAGCCTGTCTTGCTC TGACCTGGCACAGGAATACCCTAGAAGAGCCTGTCTTGCTC < 41bp 0.631308384789779 0.837989726336602 0.4968885 0.7499336 prediction 0.413362683093646 Functional Gain - MCM10 ENSG00000065328 CDS Human protein_coding chr10:13234262 chr10:13234263 stopgain 0.998 0 22 hm5C_associated_SNPs_126362 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr10:13234252-13234306
64251 chrX 48380282 48380282 1 + C A rs782026815 48380278 + 48380258 48380298 41 GGAGCCAGCGTGGGAGGCCGCTGCCGTCGCGCGCCTTGGTG GGAGCCAGCGTGGGAGGCCGCTGCAGTCGCGCGCCTTGGTG < 41bp 0.71047539368065 0.917152942098652 0.6872501 0.89335567 prediction 0.413355096836005 Functional Gain - EBP ENSG00000147155 UTR5 Human protein_coding chrX:48380278 chrX:48380282 . . 0 25 hm5C_associated_SNPs_126365 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:48380259-48380286
64251 chr11 8941005 8941005 1 + T C UCEC 8941003 + 8940983 8941023 41 GCAGTTGATTCTGGACAAAGCGTGGACCTGGTCTTCCCTGT GCAGTTGATTCTGGACAAAGCGCGGACCTGGTCTTCCCTGT < 41bp 0.613396000286001 0.820067231506045 0.37326598 0.6051993 prediction 0.413342462440087 Functional Gain - AKIP1 ENSG00000166452 CDS Human protein_coding chr11:8941003 chr11:8941005 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_126371 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8940965-8941013
64251 chr8 22398214 22398214 1 + C A BLCA 22398213 + 22398193 22398233 41 ATTAATGAGCGAATGCCACCCCGAAAGGATAGCATACACGC ATTAATGAGCGAATGCCACCCAGAAAGGATAGCATACACGC < 41bp 0.627565019628973 0.834225295432728 0.14323255 0.19794491 prediction 0.413320551607508 Functional Gain - PPP3CC ENSG00000120910 CDS Human protein_coding chr8:22398213 chr8:22398214 synonymous SNV . 0 22 hm5C_associated_SNPs_126375 0 0 1 GRWD1 POSTAR2 ENCODE chr8:22398133-22398221
64251 chr10 105181270 105181270 1 + C T UCEC 105181269 + 105181249 105181289 41 GCTATCACCAGCCTCCTCCTCCTGAATCAGTGCCTGGAGGA GCTATCACCAGCCTCCTCCTCTTGAATCAGTGCCTGGAGGA < 41bp 0.439793263471454 0.706651594362471 0.30524227 0.24798161 prediction 0.413303188724943 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105181269 chr10:105181270 synonymous SNV . 0 22 hm5C_associated_SNPs_126377 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:105181241-105181272
64251 chr6 26388520 26388520 1 + C T STAD 26388519 + 26388499 26388539 41 AGGAAACTGTCATTTTTATTCCAGGTTAGTTCTCTGCCCTC AGGAAACTGTCATTTTTATTCTAGGTTAGTTCTCTGCCCTC < 41bp 0.584721422541914 0.791366877882293 0.8870779 0.7110506 prediction 0.413290910680757 Functional Gain - BTN2A2 ENSG00000124508 CDS Human protein_coding chr6:26388519 chr6:26388520 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_126380 0 0 3 PRPF8 POSTAR2 ENCODE chr6:26388515-26388563
64251 chr12 8291122 8291122 1 + T G rs1133104 8291120 + 8291100 8291140 41 GGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTC GGAGGCCCCCATTGTGCACACAGGGAGAGAACATGAGTCTC < 41bp 0.663230708985057 0.869870836983593 0.065742046 0.2744264 prediction 0.413280255997071 Functional Gain - CLEC4A ENSG00000111729 UTR3 Human protein_coding chr12:8291120 chr12:8291122 . . 0 23 hm5C_associated_SNPs_126382 0 1 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr12:8291118-8291247
64251 chr3 38411602 38411602 1 + T A LUSC 38411600 + 38411580 38411620 41 AAGTCTGGTCCCAGGCTTGCCTTGGTGCCTGTGCACCTCAT AAGTCTGGTCCCAGGCTTGCCTAGGTGCCTGTGCACCTCAT < 41bp 0.508579916622189 0.715215422117688 0.20345947 0.5234709 prediction 0.413271010990997 Functional Gain - XYLB ENSG00000093217 CDS Human protein_coding chr3:38411600 chr3:38411602 synonymous SNV . 0 23 hm5C_associated_SNPs_126385 0 0 5 DDX24 POSTAR2 ENCODE chr3:38411552-38411605
64251 chr19 47823649 47823649 1 + C G rs61733735 47823646 + 47823626 47823666 41 CGGGAGCGAGCCGTGGCCATCGTCCGGCTGGTCCTGGGCTT CGGGAGCGAGCCGTGGCCATCGTGCGGCTGGTCCTGGGCTT < 41bp 0.508431322702725 0.715057972455179 0.39532578 0.8622817 prediction 0.413253299504908 Functional Gain - C5AR1 ENSG00000197405 CDS Human protein_coding chr19:47823646 chr19:47823649 synonymous SNV . 0 24 hm5C_associated_SNPs_126389 0 0 1 SND1 POSTAR2 ENCODE chr19:47823606-47823662
64251 chr8 145135445 145135445 1 + C A UCEC 145135441 + 145135421 145135461 41 CAGGCTGCCCGAGATGTGCACACCCTCTTAGATCGAGTGGT CAGGCTGCCCGAGATGTGCACACCATCTTAGATCGAGTGGT < 41bp 0.293919877730697 0.70662473369011 0.035318792 0.0773333 prediction 0.41324946738022 Functional Gain - EXOSC4 ENSG00000178896 CDS Human protein_coding chr8:145135441 chr8:145135445 nonsynonymous SNV 0.067 0 25 hm5C_associated_SNPs_126391 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr8:145135441-145135478
64251 chr11 34097866 34097866 1 + T C BLCA 34097864 + 34097844 34097884 41 AGAAACGTTTAAAAACTGTACTTGAGCTACAGTATGTTTTG AGAAACGTTTAAAAACTGTACTCGAGCTACAGTATGTTTTG < 41bp 0.405703609369952 0.706621592086988 0.084264904 0.18778026 prediction 0.413243184173976 Functional Gain - CAPRIN1 ENSG00000135387 CDS Human protein_coding chr11:34097864 chr11:34097866 synonymous SNV . 0 23 hm5C_associated_SNPs_126393 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:34097800-34098019
64251 chr7 92163920 92163920 1 + T C COAD 92163917 + 92163897 92163937 41 TATGTGTTCATCCGGGGGACCTGTAGACAGAGCACCAGACT TATGTGTTCATCCGGGGGACCTGCAGACAGAGCACCAGACT < 41bp 0.504858722737604 0.711477885665728 0.18683344 0.35313886 prediction 0.413238325856247 Functional Gain - RBM48 ENSG00000127993 CDS Human protein_coding chr7:92163917 chr7:92163920 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_126394 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:92163883-92163921
64251 chr5 96078409 96078409 1 + C T SKCM 96078408 + 96078388 96078428 41 TCTGTCGGCTTCACTGGGCACCCGGCAAGCAGAACCTGAGC TCTGTCGGCTTCACTGGGCACTCGGCAAGCAGAACCTGAGC < 41bp 0.568525065458349 0.77514075067415 0.18529895 0.37595183 prediction 0.413231370431602 Functional Gain - CAST ENSG00000153113 CDS Human protein_coding chr5:96078408 chr5:96078409 synonymous SNV . 0 22 hm5C_associated_SNPs_126396 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr5:96078371-96078411
64251 chr1 24120993 24120993 1 + T A UCEC 24120989 + 24120969 24121009 41 TGGACCCCATGGTGCCCGTACGGTTTGGGGCCCTGACGGCT TGGACCCCATGGTGCCCGTACGGTATGGGGCCCTGACGGCT < 41bp 0.361501591601537 0.706613345399148 0.32259527 0.26001436 prediction 0.413226690798297 Functional Gain - LYPLA2 ENSG00000011009 CDS Human protein_coding chr1:24120989 chr1:24120993 nonsynonymous SNV 0.999 1 25 hm5C_associated_SNPs_126399 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr1:24120980-24121015
64251 chr3 14508141 14508141 1 + C A THCA 14508137 + 14508117 14508157 41 TTCTATCTGTATCCTGACATCACCCGCCTTGAGGACCCACA TTCTATCTGTATCCTGACATCACCAGCCTTGAGGACCCACA < 41bp 0.26991483821132 0.706611727532856 0.05701956 0.23429084 prediction 0.413223455065713 Functional Gain - SLC6A6 ENSG00000131389 CDS Human protein_coding chr3:14508137 chr3:14508141 nonsynonymous SNV 0.994 2 25 hm5C_associated_SNPs_126401 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr3:14508109-14508141
64251 chr11 63971543 63971543 1 + T C UCEC 63971540 + 63971520 63971560 41 CTGTAGACACTTAAAGAATCCTGTAATAGCACAGAAGATCC CTGTAGACACTTAAAGAATCCTGCAATAGCACAGAAGATCC < 41bp 0.481892774128428 0.706609888029342 0.20526111 0.25463712 prediction 0.413219776058683 Functional Gain - STIP1 ENSG00000168439 CDS Human protein_coding chr11:63971540 chr11:63971543 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126402 0 0 11 CSTF2 POSTAR2 GSE37401,GSM917676 chr11:63971508-63971545
64251 chr21 33296969 33296969 1 + A G LUSC 33296966 + 33296946 33296986 41 GCCCTGGGGGCAACCTGATGCACAAGATCTATGAGAAGAAG GCCCTGGGGGCAACCTGATGCACGAGATCTATGAGAAGAAG < 41bp 0.599199466074342 0.805807976064066 0.230059 0.43023887 prediction 0.413217019979448 Functional Gain - HUNK ENSG00000142149 CDS Human protein_coding chr21:33296966 chr21:33296969 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126403 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:33296942-33296972
64251 chr16 77233329 77233329 1 + C A rs114764479 77233325 + 77233305 77233345 41 ACCAGTCATCAAGCGAGGCTCGCGCGCAGGCCCCGCGTTGG ACCAGTCATCAAGCGAGGCTCGCGAGCAGGCCCCGCGTTGG < 41bp 0.711178805135054 0.917784985218498 0.22814456 0.4281747 prediction 0.413212360166887 Functional Gain - SYCE1L;MON1B ENSG00000205078;ENSG00000103111 UTR5;UTR3 Human other chr16:77233325 chr16:77233329 . . 0 25 hm5C_associated_SNPs_126404 0 0 1 UPF1 POSTAR2 ENCODE chr16:77233300-77233355
64251 chr6 31515979 31515979 1 + C T CESC 31515978 + 31515958 31515998 41 TCCACTTCCCGCCGCCAACGCCGAGAACGTCGCTTTCGTCG TCCACTTCCCGCCGCCAACGCTGAGAACGTCGCTTTCGTCG < 41bp 0.499289996585418 0.706605641472621 0.8103592 0.37453437 prediction 0.413211282945242 Functional Gain - NFKBIL1 ENSG00000204498 CDS Human protein_coding chr6:31515978 chr6:31515979 stopgain 0.998 1 22 hm5C_associated_SNPs_126405 0 0 1 DDX3X POSTAR2 ENCODE chr6:31515938-31515987
64251 chr1 44685497 44685497 1 + T C GBM 44685494 + 44685474 44685514 41 GCAGATGAAGCTGCCAAGCTCTGTGGGACAGAAGAAGATCA GCAGATGAAGCTGCCAAGCTCTGCGGGACAGAAGAAGATCA < 41bp 0.58576079923243 0.792364351464561 0.3804477 0.6112014 prediction 0.413207104464262 Functional Gain - DMAP1 ENSG00000178028 CDS Human protein_coding chr1:44685494 chr1:44685497 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_126407 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:44685478-44685512
64251 chr19 48229404 48229404 1 + C A rs150300804 48229400 + 48229380 48229420 41 GAGCTGGAGGAGCAGGACCTCTTCCGCGACATCCAGGGCCT GAGCTGGAGGAGCAGGACCTCTTCAGCGACATCCAGGGCCT < 41bp 0.28548865064603 0.706598602491606 0.43065244 0.8237418 prediction 0.413197204983212 Functional Gain - EHD2 ENSG00000024422 CDS Human protein_coding chr19:48229400 chr19:48229404 nonsynonymous SNV 0.997 1 25 hm5C_associated_SNPs_126409 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48229380-48229407
64251 chr21 37785364 37785364 1 + C A rs115050809 37785363 + 37785343 37785383 41 GGTCTTCGCCAGGACCCAGACCGGTAGAGGGAACCCCTGCC GGTCTTCGCCAGGACCCAGACAGGTAGAGGGAACCCCTGCC < 41bp 0.620664787725014 0.827261287435733 0.13012698 0.2128047 prediction 0.413192999421438 Functional Gain - CHAF1B ENSG00000159259 CDS Human protein_coding chr21:37785363 chr21:37785364 nonsynonymous SNV 0.015 0 22 hm5C_associated_SNPs_126411 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350198 chr21:37785323-37785383
64251 chr19 13080609 13080609 1 + A G STAD 13080606 + 13080586 13080626 41 AATCAGACCTGGGCTCTGGGCCCAGGGGCCCTGCCCCCACT AATCAGACCTGGGCTCTGGGCCCGGGGGCCCTGCCCCCACT < 41bp 0.63465002021336 0.84124600227192 0.38864174 0.9105487 prediction 0.413191964117118 Functional Gain - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13080606 chr19:13080609 synonymous SNV . 0 24 hm5C_associated_SNPs_126413 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr19:13080594-13080632
64251 chr4 142150761 142150761 1 + C A SKCM 142150760 + 142150740 142150780 41 TTCTGTGAAGCTTGGGTTTGCCATGGTAGGAAATGTCTCAG TTCTGTGAAGCTTGGGTTTGCAATGGTAGGAAATGTCTCAG < 41bp 0.444189554979291 0.70659343394891 0.18708175 0.17077172 prediction 0.413186867897821 Functional Gain - ZNF330 ENSG00000109445 CDS Human protein_coding chr4:142150760 chr4:142150761 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126417 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr4:142150702-142150852
64251 chr16 90001817 90001817 1 + C T STAD 90001816 + 90001796 90001836 41 GTGGCCACCGTGTTCCGGGGCCGCATGTCCATGAAGGAGGT GTGGCCACCGTGTTCCGGGGCTGCATGTCCATGAAGGAGGT < 41bp 0.453714340251202 0.70659172715205 0.04742545 0.047875494 prediction 0.4131834543041 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 CDS Human other chr16:90001816 chr16:90001817 nonsynonymous SNV 0.936 4 22 hm5C_associated_SNPs_126418 0 0 1 RPS3 POSTAR2 ENCODE chr16:90001753-90001825
64251 chr7 101187320 101187320 1 + C T SKCM 101187319 + 101187299 101187339 41 CCACCAGGGCCTGCAGGCCCCCCCGGGTCTAAAGGTGACCG CCACCAGGGCCTGCAGGCCCCTCCGGGTCTAAAGGTGACCG < 41bp 0.456839801118499 0.706589005551085 0.15748438 0.367076 prediction 0.413178011102169 Functional Gain - COL26A1 ENSG00000160963 CDS Human protein_coding chr7:101187319 chr7:101187320 nonsynonymous SNV 0.944 2 22 hm5C_associated_SNPs_126419 0 0 1 SND1 POSTAR2 ENCODE chr7:101187276-101187372
64251 chr4 2691333 2691333 1 + C T SKCM 2691332 + 2691312 2691352 41 CGAGCTGTTTTGGGAATACTCCAGAGTGGAATAGTTCTAAA CGAGCTGTTTTGGGAATACTCTAGAGTGGAATAGTTCTAAA < 41bp 0.62758794224912 0.834172018966086 0.75200385 0.3456572 prediction 0.413168153433932 Functional Gain - FAM193A ENSG00000125386 CDS Human protein_coding chr4:2691332 chr4:2691333 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126420 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:2691306-2691333
64251 chr12 14976469 14976469 1 + C T SKCM 14976468 + 14976448 14976488 41 TGTACTAAAAACTGAGGATTCCAAAAATCCCACAAAGTCAG TGTACTAAAAACTGAGGATTCTAAAAATCCCACAAAGTCAG < 41bp 0.584930481195553 0.791512756563476 0.23793375 0.49193656 prediction 0.413164550735845 Functional Gain - C12orf60 ENSG00000182993 CDS Human protein_coding chr12:14976468 chr12:14976469 synonymous SNV . 0 22 hm5C_associated_SNPs_126421 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr12:14976433-14976483
64251 chr19 9270907 9270907 1 + C T PRAD 9270906 + 9270886 9270926 41 GCTGGCAAGAGGCCCTATCACCGCCGCGACTATGGGGTAGC GCTGGCAAGAGGCCCTATCACTGCCGCGACTATGGGGTAGC < 41bp 0.472269969483481 0.706581224967997 0.45333695 0.32698494 prediction 0.413162449935994 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9270906 chr19:9270907 nonsynonymous SNV 0.959 0 22 hm5C_associated_SNPs_126422 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:9270900-9270920
64251 chr6 20403946 20403946 1 + C T rs188573308 20403945 + 20403925 20403965 41 CTCCTCTCCCCACCCCCCCACCGGCGCCCGCCCTCGCCCTG CTCCTCTCCCCACCCCCCCACTGGCGCCCGCCCTCGCCCTG < 41bp 0.50689790776027 0.713465175710185 0.61770076 0.31769925 prediction 0.41313453589983 Functional Gain - E2F3 ENSG00000112242 intronic Human protein_coding chr6:20403945 chr6:20403946 . . 0 22 hm5C_associated_SNPs_126428 0 0 6 CSTF2T POSTAR2 ENCODE chr6:20403918-20403978
64251 chr2 61148917 61148917 1 + T G SKCM 61148915 + 61148895 61148935 41 CAGAACCAAACTTGTTTTCTCATGATGCAGTTGTGAGAGAA CAGAACCAAACTTGTTTTCTCAGGATGCAGTTGTGAGAGAA < 41bp 0.38475807381139 0.706565485281911 0.23764902 0.87162375 prediction 0.413130970563821 Functional Gain - REL ENSG00000162924 CDS Human protein_coding chr2:61148915 chr2:61148917 nonsynonymous SNV 0.995 0 23 hm5C_associated_SNPs_126430 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003589 chr2:61148898-61148919
64251 chr4 2899948 2899948 1 + C T UCEC 2899947 + 2899927 2899967 41 GTGGCCTCTTGCCAATCTCCCCGGAGGCGCTTTCCCTTGGA GTGGCCTCTTGCCAATCTCCCTGGAGGCGCTTTCCCTTGGA < 41bp 0.605162882597925 0.811727297963233 0.79189265 0.8223727 prediction 0.413128830730617 Functional Gain - ADD1 ENSG00000087274 CDS Human protein_coding chr4:2899947 chr4:2899948 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_126431 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:2899924-2899966
64251 chr1 236306038 236306038 1 + C A LIHC 236306037 + 236306017 236306057 41 CGCTGACCCCGGCCGTGCCCCCCTACGTGAAGCTTGGCCTC CGCTGACCCCGGCCGTGCCCCACTACGTGAAGCTTGGCCTC < 41bp 0.619568231280475 0.826128439572134 0.010140032 0.018650323 prediction 0.413120416583318 Functional Gain - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236306037 chr1:236306038 nonsynonymous SNV 0.981 3 22 hm5C_associated_SNPs_126434 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:236305997-236306049
64251 chr1 28857058 28857058 1 + C T BLCA 28857057 + 28857037 28857077 41 ACGAGGGCCGCTGCCTCCCGCCGCGTTCCTGGCGCCCGCTC ACGAGGGCCGCTGCCTCCCGCTGCGTTCCTGGCGCCCGCTC < 41bp 0.584184269795179 0.790741049429423 0.33740076 0.2887169 prediction 0.413113559268489 Functional Gain - RCC1 ENSG00000180198 CDS Human protein_coding chr1:28857057 chr1:28857058 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_126436 0 0 1 PPIG POSTAR2 ENCODE chr1:28857041-28857117
64251 chr15 67813744 67813744 1 + T C rs187386601 67813742 + 67813722 67813762 41 CCGCACTGGACCTCCTTCTGCGTGCCCTACAGCGCCGTCCG CCGCACTGGACCTCCTTCTGCGCGCCCTACAGCGCCGTCCG < 41bp 0.607291703640768 0.813840211337037 0.20401773 0.27372313 prediction 0.413097015392538 Functional Gain - C15orf61 ENSG00000189227 CDS Human protein_coding chr15:67813742 chr15:67813744 nonsynonymous SNV 0.997 2 23 hm5C_associated_SNPs_126439 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819216 chr15:67813700-67813760
64251 chr18 72998676 72998676 1 + C A rs73484103 72998675 + 72998655 72998695 41 CACCGCCCACATGATGGTCACCGGGCACTTCCTGAAAGTGA CACCGCCCACATGATGGTCACAGGGCACTTCCTGAAAGTGA < 41bp 0.432903081479145 0.706547605661415 0.5190431 0.8237488 prediction 0.413095211322831 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72998675 chr18:72998676 synonymous SNV . 0 22 hm5C_associated_SNPs_126440 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr18:72998667-72998708
64251 chr14 21464395 21464395 1 + T C rs35308618 21464392 + 21464372 21464412 41 CCCATGAACTCCCTTGTCCCCAGTTGACCAACCTGGCCTGT CCCATGAACTCCCTTGTCCCCAGCTGACCAACCTGGCCTGT < 41bp 0.522797605049785 0.729343674676929 0.2244558 0.38972503 prediction 0.413092139254289 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464392 chr14:21464395 synonymous SNV . 0 24 hm5C_associated_SNPs_126441 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350196 chr14:21464351-21464422
64251 chr6 76369060 76369060 1 + T C rs370794979 76369057 + 76369037 76369077 41 AAAGTACAACAGAAACGACACTGTAGTACCTATCAGCCTAC AAAGTACAACAGAAACGACACTGCAGTACCTATCAGCCTAC < 41bp 0.484996994922589 0.706544430581758 0.050320894 0.08806166 prediction 0.413088861163517 Functional Gain - SENP6 ENSG00000112701 CDS Human protein_coding chr6:76369057 chr6:76369060 synonymous SNV . 0 24 hm5C_associated_SNPs_126442 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:76369060-76369080
64251 chr6 36410801 36410801 1 + C A rs2273883 36410797 + 36410777 36410817 41 GCGCGCCGCTGCGGCACAGCCGGTCCCGGCTGCGGCTTCTG GCGCGCCGCTGCGGCACAGCCGGTACCGGCTGCGGCTTCTG < 41bp 0.676691227046187 0.883233094615494 0.67825043 0.7990014 prediction 0.413083735138615 Functional Gain - KCTD20 ENSG00000112078 UTR5 Human protein_coding chr6:36410797 chr6:36410801 . . 0 25 hm5C_associated_SNPs_126445 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:36410800-36410820
64251 chr19 7712577 7712577 1 + C A rs146551063 7712573 + 7712553 7712593 41 TGTCAAAGACGAAGGCAGCGCCCCCCAACATCTTCCCCAAA TGTCAAAGACGAAGGCAGCGCCCCACAACATCTTCCCCAAA < 41bp 0.35370525394187 0.706532222601565 0.15528959 0.18573388 prediction 0.413064445203129 Functional Gain - STXBP2 ENSG00000076944 intronic Human protein_coding chr19:7712573 chr19:7712577 . . 0 25 hm5C_associated_SNPs_126452 0 0 4 SF3B4 POSTAR2 ENCODE chr19:7712542-7712591
64251 chr8 86027355 86027355 1 + C A LIHC 86027354 + 86027334 86027374 41 GGGTACAGAGCAGTTATTCTCCAGACTTTGCCACAGCTTAG GGGTACAGAGCAGTTATTCTCAAGACTTTGCCACAGCTTAG < 41bp 0.607107657829007 0.81363983509401 0.8688406 0.8974118 prediction 0.413064354530007 Functional Gain - LRRCC1 ENSG00000133739 CDS Human protein_coding chr8:86027354 chr8:86027355 nonsynonymous SNV 0.997 3 22 hm5C_associated_SNPs_126453 0 0 1 LIN28B POSTAR2 ENCODE chr8:86027342-86027359
64251 chr13 31898005 31898005 1 + T C LUSC 31898003 + 31897983 31898023 41 GCTTTAGTGGCTTGGGAATCCCTGTGACACACAGCCCTCTC GCTTTAGTGGCTTGGGAATCCCCGTGACACACAGCCCTCTC < 41bp 0.419650154313136 0.706530850341475 0.0987207 0.17118785 prediction 0.41306170068295 Functional Gain - B3GLCT ENSG00000187676 CDS Human protein_coding chr13:31898003 chr13:31898005 synonymous SNV . 0 23 hm5C_associated_SNPs_126454 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr13:31897981-31898010
64251 chr10 105172965 105172965 1 + C T SKCM 105172964 + 105172944 105172984 41 ACAGCCTGGACGCCCACTCACCCGACTCTCTTGCCAGAACC ACAGCCTGGACGCCCACTCACTCGACTCTCTTGCCAGAACC < 41bp 0.640431342914292 0.846941888788708 0.23841473 0.48968655 prediction 0.413021091748832 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105172964 chr10:105172965 synonymous SNV . 0 22 hm5C_associated_SNPs_126465 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr10:105172897-105172977
64251 chr10 1205871 1205871 1 + T C UCEC 1205869 + 1205849 1205889 41 CGCGCCTCACGCTTTATGTACATGAGGGATGAGGCAGCACA CGCGCCTCACGCTTTATGTACACGAGGGATGAGGCAGCACA < 41bp 0.534152669006305 0.740657055455376 0.14018813 0.082611054 prediction 0.413008772898142 Functional Gain - LINC00200 ENSG00000229205 ncRNA_exonic Human lincRNA chr10:1205869 chr10:1205871 . . 0 23 hm5C_associated_SNPs_126469 0 0 1 DDX3X POSTAR2 ENCODE chr10:1205864-1205931
64251 chr1 244868943 244868943 1 + C T UCEC 244868942 + 244868922 244868962 41 CCTTTCTACAGAGTTGCCTCCCGAAGGAGTGGCTCACGCCC CCTTTCTACAGAGTTGCCTCCTGAAGGAGTGGCTCACGCCC < 41bp 0.620990814499675 0.827474995054378 0.8360989 0.1917525 prediction 0.412968361109407 Functional Gain - DESI2 ENSG00000121644 CDS Human protein_coding chr1:244868942 chr1:244868943 nonsynonymous SNV 0.938 3 22 hm5C_associated_SNPs_126477 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:244868900-244869060
64251 chr6 26199945 26199945 1 + C T OV 26199944 + 26199924 26199964 41 AAAGCAGGTCCACCCCGACACCGGCATCTCATCCAAGGCCA AAAGCAGGTCCACCCCGACACTGGCATCTCATCCAAGGCCA < 41bp 0.523459192391743 0.729942166031383 0.027621001 0.02202341 prediction 0.412965947279279 Functional Gain - HIST1H2BF ENSG00000197846 CDS Human other chr6:26199944 chr6:26199945 synonymous SNV . 0 22 hm5C_associated_SNPs_126478 0 0 6 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:26199940-26199972
64251 chr7 102952301 102952301 1 + T C LGG 102952298 + 102952278 102952318 41 ATTGGTAGGCAAATGTTATGCTATAATAGAAGGATTCCCAT ATTGGTAGGCAAATGTTATGCTACAATAGAAGGATTCCCAT < 41bp 0.563738430434298 0.770220771728462 0.33490157 0.55783373 prediction 0.412964682588329 Functional Gain - PMPCB ENSG00000105819 CDS Human protein_coding chr7:102952298 chr7:102952301 synonymous SNV . 0 24 hm5C_associated_SNPs_126479 0 0 13 CSTF2 POSTAR2 GSE40859,GSM1003587 chr7:102952284-102952305
64251 chr6 26199818 26199818 1 + C T LUAD 26199817 + 26199797 26199837 41 CTGCTAAGTCCGCTCCTGCTCCAAAAAAGGGCTCCAAAAAG CTGCTAAGTCCGCTCCTGCTCTAAAAAAGGGCTCCAAAAAG < 41bp 0.529506929543505 0.735988692604045 0.15526357 0.22195497 prediction 0.41296352612108 Functional Gain - HIST1H2BF ENSG00000197846 CDS Human other chr6:26199817 chr6:26199818 nonsynonymous SNV 0.426 2 22 hm5C_associated_SNPs_126480 0 0 26 DDX3X POSTAR2 GSE70804,GSM1819214 chr6:26199760-26199880
64251 chr5 137681218 137681218 1 + C T COAD 137681217 + 137681197 137681237 41 CAGCCTTGTGATCTGGATGCCCGCAAAACTGGGGTCAAGCG CAGCCTTGTGATCTGGATGCCTGCAAAACTGGGGTCAAGCG < 41bp 0.444715344136195 0.706480645536196 0.19248274 0.34381735 prediction 0.412961291072392 Functional Gain - FAM53C ENSG00000120709 CDS Human protein_coding chr5:137681217 chr5:137681218 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126481 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:137681168-137681234
64251 chr1 220752768 220752768 1 + C T BLCA 220752767 + 220752747 220752787 41 AGTAGCAGACAGAACATCCCCCGGTGTAGAAACTCCATTAC AGTAGCAGACAGAACATCCCCTGGTGTAGAAACTCCATTAC < 41bp 0.604298126844481 0.810773059373513 0.13173145 0.106825024 prediction 0.412949865058062 Functional Gain - MARK1 ENSG00000116141 CDS Human protein_coding chr1:220752767 chr1:220752768 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_126483 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:220752700-220752802
64251 chr2 74327929 74327929 1 + C T rs559418979 74327928 + 74327908 74327948 41 CTACGGTGGTGCTGAGTTTGCCGAGCTGCCCAGCCAGGCTG CTACGGTGGTGCTGAGTTTGCTGAGCTGCCCAGCCAGGCTG < 41bp 0.568202307299459 0.774675032801986 0.8123197 0.44963458 prediction 0.412945451005055 Functional Gain - TET3 ENSG00000187605 CDS Human protein_coding chr2:74327928 chr2:74327929 synonymous SNV . 0 22 hm5C_associated_SNPs_126484 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:74327927-74327957
64251 chr15 80215427 80215427 1 - G C BLCA 80215431 - 80215411 80215451 41 GACGCCCCGGTGGCGGAGGACGTCCCGGAGGATCCCTCTGG GACGCCCCGGTGGCGGAGGACGTCGCGGAGGATCCCTCTGG < 41bp 0.427059646545052 0.706466711308435 0.5016373 0.73402596 prediction 0.412933422616869 Functional Gain - ST20-AS1 ENSG00000259642 CDS Human antisense chr15:80215431 chr15:80215427 synonymous SNV . 0 25 hm5C_associated_SNPs_126487 0 0 22 AKAP8L POSTAR2 ENCODE chr15:80215401-80215494
64251 chr8 22476767 22476767 1 + C G LIHC 22476766 + 22476746 22476786 41 GCGGAGGCCGAGGAGACCGCCCGGACGGCGGAGCGACAGAA GCGGAGGCCGAGGAGACCGCCGGGACGGCGGAGCGACAGAA < 41bp 0.689735365662356 0.896197800886711 0.27107745 0.8301693 prediction 0.41292487044871 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22476766 chr8:22476767 nonsynonymous SNV 0.773 1 22 hm5C_associated_SNPs_126488 0 0 3 FMR1 POSTAR2 ENCODE chr8:22476723-22476792
64251 chr16 778886 778886 1 + C T UCEC 778885 + 778865 778905 41 CCACGTGAGAGCCAAGCTGTCCTGGGCTAAGGCACGGCCCC CCACGTGAGAGCCAAGCTGTCTTGGGCTAAGGCACGGCCCC < 41bp 0.559486903742551 0.765941911095248 0.5030324 0.38806617 prediction 0.412910014705395 Functional Gain - HAGHL ENSG00000103253 CDS Human protein_coding chr16:778885 chr16:778886 synonymous SNV . 0 22 hm5C_associated_SNPs_126490 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:778859-778893
64251 chr7 133041132 133041132 1 + C T SKCM 133041131 + 133041111 133041151 41 AGGAAGATTTAGAATTGGATCCAGAGGAAAACAGCACCCTG AGGAAGATTTAGAATTGGATCTAGAGGAAAACAGCACCCTG < 41bp 0.48525751584377 0.706452527422403 0.46932817 0.20316565 prediction 0.412905054844807 Functional Gain - EXOC4 ENSG00000131558 CDS Human protein_coding chr7:133041131 chr7:133041132 nonsynonymous SNV 0.992 4 22 hm5C_associated_SNPs_126491 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:133041093-133041132
64251 chr2 16082318 16082318 1 + C T UCEC 16082317 + 16082297 16082337 41 CGGCGGCCCCGACTCGACCCCCCCGGGGGAGGACATCTGGA CGGCGGCCCCGACTCGACCCCTCCGGGGGAGGACATCTGGA < 41bp 0.437307436824557 0.706450913489534 0.091353476 0.11063573 prediction 0.412901826979069 Functional Gain - MYCN ENSG00000134323 CDS Human protein_coding chr2:16082317 chr2:16082318 synonymous SNV . 0 22 hm5C_associated_SNPs_126492 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr2:16082292-16082335
64251 chr8 133854799 133854799 1 + C T rs375619922 133854798 + 133854778 133854818 41 CCTTCATCTCTGGGCTTGTTCCGGGAAGCGAAAAGACCAAG CCTTCATCTCTGGGCTTGTTCTGGGAAGCGAAAAGACCAAG < 41bp 0.462763999643872 0.706439031216154 0.788773 0.1975556 prediction 0.412878062432308 Functional Gain - PHF20L1 ENSG00000129292 CDS Human protein_coding chr8:133854798 chr8:133854799 synonymous SNV . 0 22 hm5C_associated_SNPs_126495 0 0 1 SF3B1 POSTAR2 ENCODE chr8:133854796-133854821
64251 chr16 2258560 2258560 1 + C A THCA 2258559 + 2258539 2258579 41 GGCAACCCCGGGGAGTCCTCCCGCGGCTGGATGTGGGGCTG GGCAACCCCGGGGAGTCCTCCAGCGGCTGGATGTGGGGCTG < 41bp 0.617650706992843 0.824085383406417 0.79617643 0.9073825 prediction 0.41286935282715 Functional Gain - MLST8 ENSG00000167965 CDS Human protein_coding chr16:2258559 chr16:2258560 nonsynonymous SNV 0.166 1 22 hm5C_associated_SNPs_126499 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr16:2258532-2258567
64251 chr17 36638887 36638887 1 + C T COAD 36638886 + 36638866 36638906 41 AGCCTACAGGAGCAGCTCAACCGCGGGCCTGGTGACATCAA AGCCTACAGGAGCAGCTCAACTGCGGGCCTGGTGACATCAA < 41bp 0.443766036985256 0.706420681814465 0.15468416 0.11530802 prediction 0.41284136362893 Functional Gain - ARHGAP23 ENSG00000225485 CDS Human other chr17:36638886 chr17:36638887 nonsynonymous SNV 0.935 3 22 hm5C_associated_SNPs_126507 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:36638877-36638914
64251 chr2 73479815 73479815 1 + C A LUAD 73479811 + 73479791 73479831 41 CATCAACAACGAGGACATTGCTGACAACTTTGAAGCTTTCG CATCAACAACGAGGACATTGCTGAAAACTTTGAAGCTTTCG < 41bp 0.292375738666941 0.706417223693643 0.06692529 0.093254566 prediction 0.412834447387286 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73479811 chr2:73479815 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_126510 0 0 27 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:73479773-73479841
64251 chr10 134230781 134230781 1 + T C rs41290027 134230779 + 134230759 134230799 41 TTTCTTCCCACCACTCAGCGCATGGCTGCCCTGGCTCACGA TTTCTTCCCACCACTCAGCGCACGGCTGCCCTGGCTCACGA < 41bp 0.575838248472673 0.782254128089363 0.40873462 0.3473102 prediction 0.41283175923338 Functional Gain - PWWP2B ENSG00000171813 UTR3 Human protein_coding chr10:134230779 chr10:134230781 . . 0 23 hm5C_associated_SNPs_126514 0 0 3 FUS POSTAR2 SRX029328 chr10:134230756-134230782
64251 chr5 228418 228418 1 + T A LAML 228414 + 228394 228434 41 TAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACT TAGAGGACGGGTCCATCCATCGCAAAAGAGCAAAGAACACT < 41bp 0.360380634550879 0.706415673980131 0.31300622 0.32626897 prediction 0.412831347960261 Functional Gain - SDHA ENSG00000073578 CDS Human protein_coding chr5:228414 chr5:228418 nonsynonymous SNV 0.998 1 25 hm5C_associated_SNPs_126515 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:228407-228435
64251 chr5 64867842 64867842 1 + C T BLCA 64867841 + 64867821 64867861 41 TTACTCAGATACGGCTAAACCCAGTTTACAAAGCAGTAGTG TTACTCAGATACGGCTAAACCTAGTTTACAAAGCAGTAGTG < 41bp 0.460106119200226 0.7063996590007 0.064579725 0.03378862 prediction 0.412799318001399 Functional Gain - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64867841 chr5:64867842 nonsynonymous SNV 0.974 1 22 hm5C_associated_SNPs_126522 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:64867835-64867905
64251 chr2 220043233 220043233 1 + C T rs375896695 220043232 + 220043212 220043252 41 CGAGGCGGTGGGACGCCTGGCCACGACGCTGTGGCTGCGGC CGAGGCGGTGGGACGCCTGGCTACGACGCTGTGGCTGCGGC < 41bp 0.564924776782911 0.77132408353979 0.063580036 0.050591707 prediction 0.412798613513758 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220043232 chr2:220043233 synonymous SNV . 0 22 hm5C_associated_SNPs_126523 0 0 6 DDX3X POSTAR2 ENCODE chr2:220043178-220043241
64251 chr16 231069 231069 1 + A G STAD 231066 + 231046 231086 41 AGGCGTCGCTGGACAAGTTCCTGAGCCACGTTATCTCGGCG AGGCGTCGCTGGACAAGTTCCTGGGCCACGTTATCTCGGCG < 41bp 0.606045407973575 0.812440244791797 0.33267486 0.5975524 prediction 0.412789673636443 Functional Gain - HBQ1 ENSG00000086506 CDS Human protein_coding chr16:231066 chr16:231069 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_126524 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:231032-231075
64251 chr19 10980353 10980353 1 + C G rs1861634 10980349 + 10980329 10980369 41 AGACGTCCCAGGTCTCTGCACACCCGTGGAATTCCTCCCTT AGACGTCCCAGGTCTCTGCACACCGGTGGAATTCCTCCCTT < 41bp 0.609961426478507 0.816350123156678 0.07975116 0.269145 prediction 0.412777393356341 Functional Gain - C19orf38 ENSG00000214212 UTR3 Human protein_coding chr19:10980349 chr19:10980353 . . 0 25 hm5C_associated_SNPs_126525 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:10980346-10980375
64251 chr11 65124431 65124431 1 + C T SKCM 65124430 + 65124410 65124450 41 CTCTGAGATGCCACCAGTCCCCGGCGGGCTGAGCCTGGAGG CTCTGAGATGCCACCAGTCCCTGGCGGGCTGAGCCTGGAGG < 41bp 0.570912370135871 0.777294273902492 0.41707504 0.12661311 prediction 0.412763807533241 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65124430 chr11:65124431 synonymous SNV . 0 22 hm5C_associated_SNPs_126529 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:65124407-65124437
64251 chr8 68031034 68031034 1 + C A THCA 68031030 + 68031010 68031050 41 GCTTATGTTAGTGCTCCTGTCACCCACCAACTAGCACAACC GCTTATGTTAGTGCTCCTGTCACCAACCAACTAGCACAACC < 41bp 0.282941457132344 0.706380212820632 0.08321953 0.23631603 prediction 0.412760425641264 Functional Gain - CSPP1 ENSG00000104218 CDS Human protein_coding chr8:68031030 chr8:68031034 nonsynonymous SNV 0.121 0 25 hm5C_associated_SNPs_126530 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:68031012-68031046
64251 chr2 54023133 54023133 1 + A G rs192316706 54023130 + 54023110 54023150 41 TTTTGGAGCCACTATTTAAACAAAGCAGTTGTTCCTACAGA TTTTGGAGCCACTATTTAAACAAGGCAGTTGTTCCTACAGA < 41bp 0.583573738892011 0.789953703221335 0.26301903 0.8685697 prediction 0.412759928658647 Functional Gain - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54023130 chr2:54023133 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126531 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr2:54023108-54023145
64251 chr4 110737493 110737493 1 + T G STAD 110737491 + 110737471 110737511 41 CGAGGGGGTGGCCGCGGAGGCTTTAACAAAGGCCAAGACCA CGAGGGGGTGGCCGCGGAGGCTGTAACAAAGGCCAAGACCA < 41bp 0.398114604739352 0.706379483797297 0.16646644 0.42739016 prediction 0.412758967594594 Functional Gain - GAR1 ENSG00000109534 CDS Human protein_coding chr4:110737491 chr4:110737493 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_126532 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:110737463-110737493
64251 chr6 158294193 158294193 1 + C T rs539593311 158294192 + 158294172 158294212 41 AGGAGAACGAGGGCTGGTTCCCACAGACTACGTTGAAGTAA AGGAGAACGAGGGCTGGTTCCTACAGACTACGTTGAAGTAA < 41bp 0.640840889395263 0.84721863498864 0.30876917 0.46435112 prediction 0.412755491186755 Functional Gain - SNX9 ENSG00000130340 CDS Human protein_coding chr6:158294192 chr6:158294193 synonymous SNV . 0 22 hm5C_associated_SNPs_126533 0 0 10 BUD13 POSTAR2 ENCODE chr6:158294133-158294207
64251 chr4 3445869 3445869 1 + C T CESC 3445868 + 3445848 3445888 41 CAGCTGCCCCCGGGCCTTCACCGGCAAGGACTGCGGCACAG CAGCTGCCCCCGGGCCTTCACTGGCAAGGACTGCGGCACAG < 41bp 0.571079256374742 0.777452642826498 0.7549942 0.43155736 prediction 0.412746772903511 Functional Gain - HGFAC ENSG00000109758 CDS Human protein_coding chr4:3445868 chr4:3445869 synonymous SNV . 0 22 hm5C_associated_SNPs_126536 0 0 1 PPIG POSTAR2 ENCODE chr4:3445865-3445877
64251 chr9 82267551 82267551 1 + C T SKCM 82267550 + 82267530 82267570 41 TATCACATGGACATGGTCTCCCCGTACCTCTGACTCCACAC TATCACATGGACATGGTCTCCTCGTACCTCTGACTCCACAC < 41bp 0.491873143414578 0.706370736753752 0.1168232 0.12438151 prediction 0.412741473507503 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82267550 chr9:82267551 nonsynonymous SNV 0.561 2 22 hm5C_associated_SNPs_126537 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr9:82267516-82267574
64251 chr2 27167548 27167548 1 + C T UCEC 27167547 + 27167527 27167567 41 TTAAAGGTTAGAGGAGTGGACCGCACTCCCTACCTGGGGGA TTAAAGGTTAGAGGAGTGGACTGCACTCCCTACCTGGGGGA < 41bp 0.446112431998845 0.706367494637951 0.13102543 0.25858974 prediction 0.412734989275902 Functional Gain - DPYSL5 ENSG00000157851 CDS Human protein_coding chr2:27167547 chr2:27167548 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_126540 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr2:27167542-27167569
64251 chr7 143080250 143080250 1 + T G rs61740599 143080246 + 143080226 143080266 41 CAAGTTCAGTCCTGGAGCCCCAGGTGGATCTGGGTCACAAC CAAGTTCAGTCCTGGAGCCCCAGGGGGATCTGGGTCACAAC < 41bp 0.519159966835767 0.725522610354831 0.8446356 0.92245233 prediction 0.412725287038127 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143080246 chr7:143080250 synonymous SNV . 0 25 hm5C_associated_SNPs_126543 0 0 1 IGF2BP1 POSTAR2 ENCODE chr7:143080223-143080263
64251 chr6 44195073 44195073 1 + A G ESCA 44195070 + 44195050 44195090 41 CATGACAACCAGTCACCAGCCTCAGGACAGGTAAGGGGTAA CATGACAACCAGTCACCAGCCTCGGGACAGGTAAGGGGTAA < 41bp 0.482008157427878 0.706351998454152 0.061300874 0.050014764 prediction 0.412703996908304 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44195070 chr6:44195073 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_126546 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:44195039-44195077
64251 chr5 145838817 145838817 1 + T C HNSC 145838814 + 145838794 145838834 41 GACCAGTAGCCCAGCACCTGCAGTATCCACTTCAACATCAT GACCAGTAGCCCAGCACCTGCAGCATCCACTTCAACATCAT < 41bp 0.524869513306162 0.731188312486677 0.13107413 0.14403877 prediction 0.41263759836103 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145838814 chr5:145838817 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_126555 0 0 20 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:145838765-145838875
64251 chr6 20481524 20481524 1 + C T UCEC 20481523 + 20481503 20481543 41 TTCAGCTCCTGAGCCAGTCACCCGATGGGGTATTGGATTTG TTCAGCTCCTGAGCCAGTCACTCGATGGGGTATTGGATTTG < 41bp 0.654689315946558 0.86100784572646 0.27132323 0.8634311 prediction 0.412637059559804 Functional Gain - E2F3 ENSG00000112242 CDS Human protein_coding chr6:20481523 chr6:20481524 nonsynonymous SNV 0.968 2 22 hm5C_associated_SNPs_126556 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr6:20481498-20481532
64251 chr1 16091636 16091636 1 + A G UCEC 16091633 + 16091613 16091653 41 TCCTGCCCCCATGAAGACACCCGAGGCTGGCTTGGCGGGGA TCCTGCCCCCATGAAGACACCCGGGGCTGGCTTGGCGGGGA < 41bp 0.61922130039778 0.82553532111888 0.68590397 0.9200786 prediction 0.412628041442201 Functional Gain - FBLIM1 ENSG00000162458 CDS Human protein_coding chr1:16091633 chr1:16091636 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_126557 0 0 1 PPIG POSTAR2 ENCODE chr1:16091522-16091689
64251 chr18 21061391 21061391 1 + T A rs1801991 21061387 + 21061367 21061407 41 CCCCCTTGTAACCCATGTGCCAGATGTGTGGAATTTTTAGC CCCCCTTGTAACCCATGTGCCAGAAGTGTGGAATTTTTAGC < 41bp 0.399377618897015 0.706302686931018 0.31570607 0.31594172 prediction 0.412605373862036 Functional Gain - RIOK3 ENSG00000101782 UTR3 Human protein_coding chr18:21061387 chr18:21061391 . . 0 25 hm5C_associated_SNPs_126559 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:21061266-21061417
64251 chr19 17837806 17837806 1 + C A rs7252905 17837805 + 17837785 17837825 41 CGAGTGTCTCCCGGACCCAGCCGCGGGAGGTGCGCCGGGCA CGAGTGTCTCCCGGACCCAGCAGCGGGAGGTGCGCCGGGCA < 41bp 0.438270834262571 0.706298147378222 0.8348296 0.89462644 prediction 0.412596294756443 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17837805 chr19:17837806 nonsynonymous SNV 0.459 3 22 hm5C_associated_SNPs_126562 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819216 chr19:17837805-17837806
64251 chr12 49666121 49666121 1 + T C GBM 49666119 + 49666099 49666139 41 TCTGGGTTCACCTCGCTGCTCATGGAACGTCTCTCAGTTGA TCTGGGTTCACCTCGCTGCTCACGGAACGTCTCTCAGTTGA < 41bp 0.646373599025875 0.852666548408188 0.26731342 0.20730826 prediction 0.412585898764626 Functional Gain - TUBA1C ENSG00000167553 CDS Human protein_coding chr12:49666119 chr12:49666121 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_126563 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr12:49666120-49666140
64251 chr5 423970 423970 1 + C T SKCM 423969 + 423949 423989 41 TCTGCAGGAGATGATGCTATCCTGGGGAGGCTGCTCAGGGC TCTGCAGGAGATGATGCTATCTTGGGGAGGCTGCTCAGGGC < 41bp 0.610912129960325 0.817199422345524 0.8974451 0.8302125 prediction 0.412574584770397 Functional Gain - AHRR ENSG00000063438 CDS Human protein_coding chr5:423969 chr5:423970 synonymous SNV . 0 22 hm5C_associated_SNPs_126569 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:423958-423986
64251 chr21 47660785 47660785 1 + T A HNSC 47660783 + 47660763 47660803 41 CAAACACTGCGCCAAGAGCTCCTCAGCAGAAGCTCCTCGCA CAAACACTGCGCCAAGAGCTCCACAGCAGAAGCTCCTCGCA < 41bp 0.495769624696701 0.706281964955803 0.118138015 0.0797762 prediction 0.412563929911606 Functional Gain - MCM3AP ENSG00000160294 CDS Human protein_coding chr21:47660783 chr21:47660785 nonsynonymous SNV 0.119 0 23 hm5C_associated_SNPs_126573 0 0 1 DDX3X POSTAR2 ENCODE chr21:47660747-47660810
64251 chr17 17699147 17699147 1 + C T SKCM 17699146 + 17699126 17699166 41 GGCCTGATGGGGAGCGAGCTCCAGGGGATTCCACCACCTCG GGCCTGATGGGGAGCGAGCTCTAGGGGATTCCACCACCTCG < 41bp 0.54845293953556 0.754727161642421 0.9330858 0.9038302 prediction 0.412548444213722 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17699146 chr17:17699147 nonsynonymous SNV 0.095 1 22 hm5C_associated_SNPs_126576 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:17699140-17699160
64251 chr1 186925434 186925434 1 + C A rs150610130 186925430 + 186925410 186925450 41 TCTCCTTTGAGTGACTTTGCCACACAGGACTCCTTTGATGA TCTCCTTTGAGTGACTTTGCCACAAAGGACTCCTTTGATGA < 41bp 0.287563720664166 0.706267091681919 0.14801812 0.10322812 prediction 0.412534183363839 Functional Gain - PLA2G4A ENSG00000116711 CDS Human protein_coding chr1:186925430 chr1:186925434 nonsynonymous SNV 0.387 1 25 hm5C_associated_SNPs_126580 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr1:186925409-186925449
64251 chr8 95862296 95862296 1 + T C STAD 95862293 + 95862273 95862313 41 AGTAAATCTGTGCATTAAACCTGTAACTTCATTTTATGATA AGTAAATCTGTGCATTAAACCTGCAACTTCATTTTATGATA < 41bp 0.552821813814731 0.759085010946251 0.022672117 0.04760593 prediction 0.412526394263039 Functional Gain - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95862293 chr8:95862296 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_126582 0 0 4 CPSF4 POSTAR2 GSE37401,GSM917667 chr8:95862274-95862300
64251 chr22 26887829 26887829 1 + A G rs1045523 26887826 + 26887806 26887846 41 CCTGCCCTACGTGGCATTGTCCCATTTTACATCCTTCCCTC CCTGCCCTACGTGGCATTGTCCCGTTTTACATCCTTCCCTC < 41bp 0.481648403686963 0.706259355797842 0.084371746 0.21742564 prediction 0.412518711595684 Functional Gain - SRRD;TFIP11 ENSG00000100104;ENSG00000100109 UTR3 Human other chr22:26887826 chr22:26887829 . . 0 24 hm5C_associated_SNPs_126584 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr22:26887820-26887840
64251 chr19 56181020 56181020 1 + C T LGG 56181019 + 56180999 56181039 41 GTCAAGTCCATCGAGATCCCCCGGCCTGTGGACGGCGTCGA GTCAAGTCCATCGAGATCCCCTGGCCTGTGGACGGCGTCGA < 41bp 0.468929374868214 0.706258124822246 0.23926634 0.14923775 prediction 0.412516249644492 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56181019 chr19:56181020 nonsynonymous SNV 0.989 4 22 hm5C_associated_SNPs_126585 0 0 44 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:56180960-56181020
64251 chr17 73486331 73486331 1 + C A STAD 73486327 + 73486307 73486347 41 CTTCCCAGGTGAATGGCGTCCTGCCCATCCTCCCCCTGCTC CTTCCCAGGTGAATGGCGTCCTGCACATCCTCCCCCTGCTC < 41bp 0.285805894868308 0.706252242655841 0.22067192 0.18584865 prediction 0.412504485311681 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73486327 chr17:73486331 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_126586 0 0 2 SRSF1 POSTAR2 GSE83923,GSM2221666 chr17:73486320-73486340
64251 chr4 42072612 42072612 1 + T A KIRP 42072610 + 42072590 42072630 41 TTAGGCATGGTCTCAGCATTCCTCATCTACACTAACACAGA TTAGGCATGGTCTCAGCATTCCACATCTACACTAACACAGA < 41bp 0.498203899027492 0.706247899391358 0.12447953 0.08872059 prediction 0.412495798782716 Functional Gain - SLC30A9 ENSG00000014824 CDS Human protein_coding chr4:42072610 chr4:42072612 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_126587 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr4:42072588-42072613
64251 chr19 7963976 7963976 1 + T C rs2115108 7963974 + 7963954 7963994 41 GCTGCGGCCACCATAGTGGCCATGGCAGGGACCGGGCCGGG GCTGCGGCCACCATAGTGGCCACGGCAGGGACCGGGCCGGG < 41bp 0.610157387737836 0.816389066680583 0.59592205 0.40496457 prediction 0.412463357885495 Functional Gain - LRRC8E ENSG00000171017 CDS Human protein_coding chr19:7963974 chr19:7963976 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_126594 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr19:7963957-7963997
64251 chr11 44641187 44641187 1 + C A rs537163605 44641183 + 44641163 44641203 41 AATTTAGCCGGGCGCGGTGGCGGGCACCTGTAGTCCCAGCT AATTTAGCCGGGCGCGGTGGCGGGAACCTGTAGTCCCAGCT < 41bp 0.70732294019328 0.913553458598336 0.88193214 0.9054487 prediction 0.412461036810113 Functional Gain - CD82 ENSG00000085117 UTR3 Human protein_coding chr11:44641183 chr11:44641187 . . 0 25 hm5C_associated_SNPs_126595 0 0 1 UPF1 POSTAR2 ENCODE chr11:44641181-44641193
64251 chr1 207317316 207317316 1 + C A COAD 207317315 + 207317295 207317335 41 CTGGGAACAGAACCTGGTACCCAGAGGTGCCCAAGTGTGAG CTGGGAACAGAACCTGGTACCAAGAGGTGCCCAAGTGTGAG < 41bp 0.637968428956806 0.844195655879128 0.862807 0.87888086 prediction 0.412454453844644 Functional Gain - C4BPA ENSG00000123838 CDS Human protein_coding chr1:207317315 chr1:207317316 nonsynonymous SNV 0.650 4 22 hm5C_associated_SNPs_126600 0 0 2 SND1 POSTAR2 ENCODE chr1:207317283-207317341
64251 chr3 17056366 17056366 1 + C T LUAD 17056365 + 17056345 17056385 41 TGGAGCTGCAGGGAATTGTGCCGGAGGTTCTGAAGAAGATC TGGAGCTGCAGGGAATTGTGCTGGAGGTTCTGAAGAAGATC < 41bp 0.451562634881608 0.706226688094872 0.24889782 0.0804432 prediction 0.412453376189744 Functional Gain - PLCL2 ENSG00000154822 CDS Human protein_coding chr3:17056365 chr3:17056366 nonsynonymous SNV 0.489 3 22 hm5C_associated_SNPs_126601 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr3:17056344-17056368
64251 chr3 42684054 42684054 1 + C T PRAD 42684053 + 42684033 42684073 41 AGCAGAGGCCGAACCAGAAGCCGGAGCAGTTCCTACCGGAG AGCAGAGGCCGAACCAGAAGCTGGAGCAGTTCCTACCGGAG < 41bp 0.607405064626888 0.813629328974436 0.47116128 0.37942004 prediction 0.412448528695096 Functional Gain - NKTR ENSG00000114857 CDS Human protein_coding chr3:42684053 chr3:42684054 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_126603 0 0 8 BUD13 POSTAR2 ENCODE chr3:42683984-42684096
64251 chr7 156754903 156754903 1 + C T SKCM 156754902 + 156754882 156754922 41 ACAATGACATGCGCAAAATTCCAGGCTATGACCCCGAGCCC ACAATGACATGCGCAAAATTCTAGGCTATGACCCCGAGCCC < 41bp 0.625621861387525 0.831841427111808 0.893415 0.85160017 prediction 0.412439131448566 Functional Gain - NOM1 ENSG00000146909 CDS Human protein_coding chr7:156754902 chr7:156754903 nonsynonymous SNV 0.274 2 22 hm5C_associated_SNPs_126605 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr7:156754894-156754916
64251 chrX 102841646 102841646 1 + C A GBM 102841645 + 102841625 102841665 41 AATGAAGGAATGGCTTCAAACCAAGGAAAGATGGAAAATGA AATGAAGGAATGGCTTCAAACAAAGGAAAGATGGAAAATGA < 41bp 0.445611335587026 0.706219512973989 0.7289097 0.8932664 prediction 0.412439025947979 Functional Gain - TCEAL4 ENSG00000133142 CDS Human protein_coding chrX:102841645 chrX:102841646 nonsynonymous SNV 0.008 0 22 hm5C_associated_SNPs_126606 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:102841595-102841690
64251 chr3 43389334 43389334 1 - G A UCEC 43389335 - 43389315 43389355 41 CCCCGGCCCTGACTTTTCCTCCGGTGGTAGCGTTTGTGAAC CCCCGGCCCTGACTTTTCCTCTGGTGGTAGCGTTTGTGAAC < 41bp 0.482500260447085 0.706218776588997 0.4343388 0.2352469 prediction 0.412437553177994 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389335 chr3:43389334 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126607 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:43389330-43389368
64251 chr19 44514520 44514520 1 + T C UCEC 44514518 + 44514498 44514538 41 TTAACCCAGTCTCAAGACTCCATCATAAATAATTCTCACTT TTAACCCAGTCTCAAGACTCCACCATAAATAATTCTCACTT < 41bp 0.444175187584776 0.706210438852959 0.028115511 0.047192216 prediction 0.412420877705918 Functional Gain - ZNF230 ENSG00000159882 CDS Human protein_coding chr19:44514518 chr19:44514520 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_126611 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44514484-44514522
64251 chr16 1552759 1552759 1 + C T STAD 1552758 + 1552738 1552778 41 CGTCACGGTCACAGACCCGGCCCCGGTGAGTTCCCGCACCC CGTCACGGTCACAGACCCGGCTCCGGTGAGTTCCCGCACCC < 41bp 0.459550629063523 0.706206790171037 0.30275857 0.28723127 prediction 0.412413580342073 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1552758 chr16:1552759 synonymous SNV . 0 22 hm5C_associated_SNPs_126614 0 0 1 PRPF8 POSTAR2 ENCODE chr16:1552727-1552767
64251 chr16 2283130 2283130 1 + A G LIHC 2283127 + 2283107 2283147 41 GCCAAGGGCACCGTCATCCACGAAGTCCACGTCCAGATGCA GCCAAGGGCACCGTCATCCACGAGGTCCACGTCCAGATGCA < 41bp 0.618889273946447 0.825093029600622 0.79817855 0.9050114 prediction 0.41240751130835 Functional Gain - E4F1 ENSG00000167967 CDS Human protein_coding chr16:2283127 chr16:2283130 synonymous SNV . 0 24 hm5C_associated_SNPs_126616 0 0 5 SRSF1 POSTAR2 GSE83923,GSM2221668 chr16:2283120-2283140
64251 chr1 150471005 150471005 1 + C T SKCM 150471004 + 150470984 150471024 41 GTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGC GTTCGCCCACCGGCCCAGATCTTGGCGGGAACTGCCCCTGC < 41bp 0.635104391902721 0.841307672143064 0.92644536 0.8823378 prediction 0.412406560480686 Functional Gain - TARS2 ENSG00000143374 CDS Human protein_coding chr1:150471004 chr1:150471005 synonymous SNV . 0 22 hm5C_associated_SNPs_126617 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:150470988-150471011
64251 chr5 179260231 179260231 1 + C A rs56092424 179260230 + 179260210 179260250 41 GAGGAAGATCGCCTTGGAGTCCGAGGGGCGCCCTGAGGCAA GAGGAAGATCGCCTTGGAGTCAGAGGGGCGCCCTGAGGCAA < 41bp 0.644922425969914 0.851121325049367 0.89315164 0.936486 prediction 0.412397798158904 Functional Gain - SQSTM1 ENSG00000161011 CDS Human protein_coding chr5:179260230 chr5:179260231 synonymous SNV . 0 22 hm5C_associated_SNPs_126621 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:179260192-179260232
64251 chr18 72999563 72999563 1 + T C rs113033195 72999561 + 72999541 72999581 41 TGTAACAACCTGGGGATCATCATGGACCACTCACCGGAGCC TGTAACAACCTGGGGATCATCACGGACCACTCACCGGAGCC < 41bp 0.638895138387376 0.845086744551859 0.3826997 0.38067633 prediction 0.412383212328966 Functional Gain - TSHZ1 ENSG00000179981 CDS Human protein_coding chr18:72999561 chr18:72999563 nonsynonymous SNV 0.193 0 23 hm5C_associated_SNPs_126625 1 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr18:72999528-72999596
64251 chr19 14675667 14675667 1 + C T HNSC 14675666 + 14675646 14675686 41 AATCACCCTCTCTACACTCCCCCTAGTAAGTGGCCTCAGAC AATCACCCTCTCTACACTCCCTCTAGTAAGTGGCCTCAGAC < 41bp 0.431858543265858 0.70618685280978 0.08886337 0.8149532 prediction 0.41237370561956 Functional Gain - TECR ENSG00000099797 CDS Human protein_coding chr19:14675666 chr19:14675667 nonsynonymous SNV 0.978 3 22 hm5C_associated_SNPs_126628 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:14675642-14675671
64251 chr22 43558862 43558862 1 + C T UCEC 43558861 + 43558841 43558881 41 GGCGGCAGCCACTACCGTGGCCTGGTACCAGGTGAGCCCGC GGCGGCAGCCACTACCGTGGCTTGGTACCAGGTGAGCCCGC < 41bp 0.575948249733998 0.782127093354395 0.24048671 0.18678337 prediction 0.412357687240794 Functional Gain - TSPO ENSG00000100300 CDS Human protein_coding chr22:43558861 chr22:43558862 synonymous SNV . 0 22 hm5C_associated_SNPs_126630 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:43558846-43558898
64251 chr9 19050182 19050182 1 + C A PAAD 19050178 + 19050158 19050198 41 GACGCTCTACAAAGCCTGGTCCAGCATCGTCTACCAGCTGA GACGCTCTACAAAGCCTGGTCCAGAATCGTCTACCAGCTGA < 41bp 0.310579107951239 0.706175514964713 0.087207675 0.17346731 prediction 0.412351029929426 Functional Gain - RRAGA ENSG00000155876 CDS Human protein_coding chr9:19050178 chr9:19050182 nonsynonymous SNV 0.990 1 25 hm5C_associated_SNPs_126633 0 0 5 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:19050160-19050220
64251 chr1 161130716 161130716 1 + C A COAD 161130715 + 161130695 161130735 41 CCCCTGCCTGGCTCACCACCCCCAACAGTGGCTTTGCCTCT CCCCTGCCTGGCTCACCACCCACAACAGTGGCTTTGCCTCT < 41bp 0.430944984211632 0.706159728169857 0.26624805 0.18337083 prediction 0.412319456339713 Functional Gain - USP21 ENSG00000143258 CDS Human protein_coding chr1:161130715 chr1:161130716 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_126638 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:161130715-161130716
64251 chr2 121740357 121740357 1 + C T rs137960978 121740356 + 121740336 121740376 41 GACACACCTGCGGTCCCACACCGGGGAGAAGCCATATGTGT GACACACCTGCGGTCCCACACTGGGGAGAAGCCATATGTGT < 41bp 0.455421717732217 0.706158362765502 0.8501141 0.32081878 prediction 0.412316725531004 Functional Gain - GLI2 ENSG00000074047 CDS Human protein_coding chr2:121740356 chr2:121740357 synonymous SNV . 0 22 hm5C_associated_SNPs_126640 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:121740336-121740358
64251 chr14 66096258 66096258 1 + T A LUSC 66096254 + 66096234 66096274 41 CCTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAAAAAG CCTCAGTCAGACAGATGGAGCAGGAGATTGGCGGGAAAAAG < 41bp 0.389815345476764 0.706155312306399 0.39682955 0.54917526 prediction 0.412310624612799 Functional Gain - FUT8 ENSG00000033170 CDS Human protein_coding chr14:66096254 chr14:66096258 synonymous SNV . 0 25 hm5C_associated_SNPs_126642 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:66096228-66096258
64251 chr11 36483945 36483945 1 + C T SKCM 36483944 + 36483924 36483964 41 ACTGTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCG ACTGTCCTGAACTATGCCTCCTCGATAACCGCAGTCAGCCG < 41bp 0.634406377563444 0.840560003730143 0.022909194 0.28282386 prediction 0.412307252333398 Functional Gain - PRR5L ENSG00000135362 CDS Human protein_coding chr11:36483944 chr11:36483945 nonsynonymous SNV 0.014 0 22 hm5C_associated_SNPs_126643 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:36483914-36483946
64251 chr7 150027656 150027656 1 + C G GBM 150027652 + 150027632 150027672 41 CAGCTGGCTGAGGGGTTGGCCCGGCAGCTCTGCACCGACTG CAGCTGGCTGAGGGGTTGGCCCGGGAGCTCTGCACCGACTG < 41bp 0.413564762186305 0.706149827662686 0.37077975 0.9020689 prediction 0.412299655325371 Functional Gain - ZBED6CL ENSG00000188707 CDS Human protein_coding chr7:150027652 chr7:150027656 nonsynonymous SNV 0.255 1 25 hm5C_associated_SNPs_126648 0 0 10 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr7:150027650-150027676
64251 chr16 133193 133193 1 + C A UCEC 133192 + 133172 133212 41 ACCGAGGCATGTTCATGAAGCCGGGGACCCTGTACGTGTAC ACCGAGGCATGTTCATGAAGCAGGGGACCCTGTACGTGTAC < 41bp 0.645011387468374 0.851160527715087 0.89190054 0.9296315 prediction 0.412298280493425 Functional Gain - MPG ENSG00000103152 CDS Human protein_coding chr16:133192 chr16:133193 nonsynonymous SNV 0.895 4 22 hm5C_associated_SNPs_126649 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr16:133179-133209
64251 chr14 105222059 105222059 1 + C T UCEC 105222058 + 105222038 105222078 41 GTCGTTCACCTGCCAGAGTCCCCAAAGCCTGGCCCTACAGG GTCGTTCACCTGCCAGAGTCCTCAAAGCCTGGCCCTACAGG < 41bp 0.44093358838343 0.706132902250712 0.25409135 0.10813066 prediction 0.412265804501423 Functional Gain - SIVA1 ENSG00000184990 CDS Human protein_coding chr14:105222058 chr14:105222059 nonsynonymous SNV 0.388 0 22 hm5C_associated_SNPs_126655 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917664 chr14:105221975-105222150
64251 chr21 40883712 40883712 1 + T A rs79433162 40883710 + 40883690 40883730 41 CGAAGATTCCTAGGCCTTTTCATGCTTCATTTCTTCCACTT CGAAGATTCCTAGGCCTTTTCAAGCTTCATTTCTTCCACTT < 41bp 0.506146784883065 0.712272905211325 0.23347 0.7048888 prediction 0.41225224065652 Functional Gain - SH3BGR;WRB-SH3BGR ENSG00000185437 UTR3 Human protein_coding chr21:40883710 chr21:40883712 . . 0 23 hm5C_associated_SNPs_126657 0 0 4 AKAP8L POSTAR2 ENCODE chr21:40883680-40883737
64251 chr10 75560160 75560160 1 + C G rs181929079 75560159 + 75560139 75560179 41 GAGCGGAGGTTTTCCACCGCCCGAGGAGGAGACACACAGTC GAGCGGAGGTTTTCCACCGCCGGAGGAGGAGACACACAGTC < 41bp 0.379098993800008 0.706125560476304 0.639576 0.934931 prediction 0.412251120952608 Functional Gain - ZSWIM8 ENSG00000214655 CDS Human protein_coding chr10:75560159 chr10:75560160 synonymous SNV . 0 22 hm5C_associated_SNPs_126659 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr10:75560160-75560180
64251 chr4 123814172 123814172 1 + C A HNSC 123814171 + 123814151 123814191 41 AGTTGTATTTTCAGTCTTCGCCAGGTCATTGAGATCCATCC AGTTGTATTTTCAGTCTTCGCAAGGTCATTGAGATCCATCC < 41bp 0.625966959338218 0.832080694512353 0.568745 0.5967434 prediction 0.412227470348269 Functional Gain - NUDT6 ENSG00000170917 CDS Human protein_coding chr4:123814171 chr4:123814172 synonymous SNV . 0 22 hm5C_associated_SNPs_126664 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr4:123814155-123814174
64251 chr14 70237962 70237962 1 + T C UCEC 70237960 + 70237940 70237980 41 CCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGT CCAGAAGTTCCTCTAGGTCTCGCAGCCGATCCCGTTCCCGT < 41bp 0.446969374008264 0.706111549105388 0.91557264 0.90340906 prediction 0.412223098210777 Functional Gain - SRSF5 ENSG00000100650 CDS Human protein_coding chr14:70237960 chr14:70237962 synonymous SNV . 0 23 hm5C_associated_SNPs_126666 0 0 18 NUDT21 POSTAR2 GSE37401,GSM917662 chr14:70237908-70237978
64251 chr14 77930956 77930956 1 + T A GBM 77930954 + 77930934 77930974 41 TTTTCAGAGTTCACCCAGGGCATGATCTTACCTACAATGAA TTTTCAGAGTTCACCCAGGGCAAGATCTTACCTACAATGAA < 41bp 0.490955071384501 0.70610046022441 0.017057836 0.020632595 prediction 0.41220092044882 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77930954 chr14:77930956 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_126667 0 0 13 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:77930940-77930976
64251 chr1 228680869 228680869 1 + C G rs76967353 228680868 + 228680848 228680888 41 CTGAGAAGGAGGAGGGGCTCCCTGAGGACGAGCTGGCTGAC CTGAGAAGGAGGAGGGGCTCCGTGAGGACGAGCTGGCTGAC < 41bp 0.690855713314063 0.896950071906493 0.3863019 0.71834946 prediction 0.412188717184859 Functional Gain - RNF187 ENSG00000168159 CDS Human protein_coding chr1:228680868 chr1:228680869 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_126670 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:228680793-228680889
64251 chr7 100275756 100275756 1 + T C UCEC 100275753 + 100275733 100275773 41 CATTGAGACAGGCCAGCAGACAGTGGGTTTTGCTGGACACA CATTGAGACAGGCCAGCAGACAGCGGGTTTTGCTGGACACA < 41bp 0.525097454338355 0.731185767832957 0.22884145 0.3972949 prediction 0.412176626989203 Functional Gain - GNB2 ENSG00000172354 CDS Human protein_coding chr7:100275753 chr7:100275756 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_126676 0 0 6 CPSF3 POSTAR2 GSE37401,GSM917668 chr7:100275739-100275775
64251 chr1 112018679 112018679 1 + C T LGG 112018678 + 112018658 112018698 41 GCAATGGCTCCACATGTAAACCCGACACTGGTGAGTTTACG GCAATGGCTCCACATGTAAACTCGACACTGGTGAGTTTACG < 41bp 0.604884994809835 0.810973018092728 0.036446333 0.18257767 prediction 0.412176046565786 Functional Gain - C1orf162 ENSG00000143110 CDS Human protein_coding chr1:112018678 chr1:112018679 nonsynonymous SNV 0.002 2 22 hm5C_associated_SNPs_126677 0 0 1 BUD13 POSTAR2 ENCODE chr1:112018627-112018695
64251 chr12 58016715 58016715 1 + C T MESO 58016714 + 58016694 58016734 41 AGCTACACTATTGACTCCAACCAGGTGGGACTCTGACTGTG AGCTACACTATTGACTCCAACTAGGTGGGACTCTGACTGTG < 41bp 0.451034669819426 0.706086538825193 0.9322649 0.36040092 prediction 0.412173077650385 Functional Gain - SLC26A10 ENSG00000135502 CDS Human protein_coding chr12:58016714 chr12:58016715 stopgain 0.975 0 22 hm5C_associated_SNPs_126678 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:58016705-58016718
64251 chr8 11640783 11640783 1 + C T SKCM 11640782 + 11640762 11640802 41 AGTTGTCTTGGAGCTCTTCCCCAGTGGTCACACCCACCTGT AGTTGTCTTGGAGCTCTTCCCTAGTGGTCACACCCACCTGT < 41bp 0.622380173359698 0.828464670449962 0.4225485 0.306822 prediction 0.412168994180527 Functional Gain - NEIL2 ENSG00000154328 CDS Human protein_coding chr8:11640782 chr8:11640783 nonsynonymous SNV 0.047 1 22 hm5C_associated_SNPs_126680 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:11640761-11640786
64251 chr2 207436471 207436471 1 + T C UCEC 207436468 + 207436448 207436488 41 TAGGAATGCTATGGATTATGCTGTAAGAAATGTTCCCTCTC TAGGAATGCTATGGATTATGCTGCAAGAAATGTTCCCTCTC < 41bp 0.565477145394651 0.771555962093452 0.5260634 0.48742273 prediction 0.412157633397603 Functional Gain - ADAM23 ENSG00000114948 CDS Human protein_coding chr2:207436468 chr2:207436471 synonymous SNV . 0 24 hm5C_associated_SNPs_126682 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr2:207436440-207436474
64251 chr17 41585853 41585853 1 + C T BLCA 41585852 + 41585832 41585872 41 CTTCCCAGTGAGATGCAGACCCGAATCTTTGACCCAGCTCC CTTCCCAGTGAGATGCAGACCTGAATCTTTGACCCAGCTCC < 41bp 0.440176097506575 0.706075511336806 0.31238425 0.39059356 prediction 0.412151022673613 Functional Gain - DHX8 ENSG00000067596 CDS Human protein_coding chr17:41585852 chr17:41585853 stopgain 1.000 1 22 hm5C_associated_SNPs_126685 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr17:41585837-41585875
64251 chr17 71231639 71231639 1 + C G COAD 71231638 + 71231618 71231658 41 TAGGATGAGTGATAATCCACCCAGAATGGAAGTGTGTCCTT TAGGATGAGTGATAATCCACCGAGAATGGAAGTGTGTCCTT < 41bp 0.401960115661579 0.70607389946969 0.083343625 0.2250416 prediction 0.412147798939379 Functional Gain - C17orf80 ENSG00000141219 CDS Human protein_coding chr17:71231638 chr17:71231639 synonymous SNV . 0 22 hm5C_associated_SNPs_126687 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr17:71231617-71231666
64251 chr13 42763247 42763247 1 + C T SKCM 42763246 + 42763226 42763266 41 TCCCAGGCTGCGCCTGTTCTCCCTGGCCTCAGCCCTCTCAT TCCCAGGCTGCGCCTGTTCTCTCTGGCCTCAGCCCTCTCAT < 41bp 0.461706971237071 0.706071299340582 0.057278126 0.120970786 prediction 0.412142598681164 Functional Gain - DGKH ENSG00000102780 CDS Human protein_coding chr13:42763246 chr13:42763247 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_126689 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:42763241-42763279
64251 chr14 68028932 68028932 1 + C T READ 68028931 + 68028911 68028951 41 AGGATTCTGTCCCTTCAGAGCCGGGAATCCAGCCTATGGGC AGGATTCTGTCCCTTCAGAGCTGGGAATCCAGCCTATGGGC < 41bp 0.57990229092596 0.785961709999659 0.9321526 0.6620666 prediction 0.412118838147396 Functional Gain - PLEKHH1 ENSG00000054690 CDS Human protein_coding chr14:68028931 chr14:68028932 nonsynonymous SNV 0.020 0 22 hm5C_associated_SNPs_126698 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:68028906-68028944
64251 chr16 68961576 68961576 1 + C T rs61729744 68961575 + 68961555 68961595 41 CAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCA CAAGAACTCGCTGTTGATCTCTGCATCACCATCTCTACCCA < 41bp 0.645812963690039 0.851866422708375 0.15665984 0.1041047 prediction 0.412106918036671 Functional Gain - TANGO6 ENSG00000103047 CDS Human protein_coding chr16:68961575 chr16:68961576 nonsynonymous SNV 0.959 4 22 hm5C_associated_SNPs_126703 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:68961555-68961577
64251 chr2 73161021 73161021 1 + C T PRAD 73161020 + 73161000 73161040 41 AAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAA AAGGGCTCCCATCACATCAACTGGTGGCGCATTGCCACGAA < 41bp 0.466037323146249 0.706040442032635 0.38164842 0.5337314 prediction 0.41208088406527 Functional Gain - EMX1 ENSG00000135638 CDS Human protein_coding chr2:73161020 chr2:73161021 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_126707 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:73161017-73161038
64251 chr5 176731697 176731697 1 + T A SKCM 176731693 + 176731673 176731713 41 ACCAGAAACTGCTGTCCCGGCGACTCCTGACCAAGACCAAC ACCAGAAACTGCTGTCCCGGCGACACCTGACCAAGACCAAC < 41bp 0.372228508052694 0.706039609338088 0.15718362 0.102490336 prediction 0.412079218676176 Functional Gain - PRELID1 ENSG00000169230 CDS Human protein_coding chr5:176731693 chr5:176731697 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_126709 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr5:176731680-176731720
64251 chr11 43350392 43350392 1 + A G UCEC 43350389 + 43350369 43350409 41 CCAGTTGGGCCGAAAACTTCCAGATTTCTTAACAGCCAAAC CCAGTTGGGCCGAAAACTTCCAGGTTTCTTAACAGCCAAAC < 41bp 0.481615211152935 0.706029738603053 0.30717158 0.546187 prediction 0.412059477206106 Functional Gain - API5 ENSG00000166181 CDS Human protein_coding chr11:43350389 chr11:43350392 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_126714 0 0 4 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:43350372-43350411
64251 chr2 113940620 113940620 1 + C T SKCM 113940619 + 113940599 113940639 41 CCACGCCCCCTGTGGACCTCCCCGGGGACACGGGCCTGCAC CCACGCCCCCTGTGGACCTCCTCGGGGACACGGGCCTGCAC < 41bp 0.474405209753354 0.706020989704223 0.46206558 0.2716989 prediction 0.412041979408446 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940619 chr2:113940620 nonsynonymous SNV 0.007 0 22 hm5C_associated_SNPs_126717 0 0 1 UCHL5 POSTAR2 ENCODE chr2:113940613-113940696
64251 chr19 55901189 55901189 1 + C T rs56283327 55901188 + 55901168 55901208 41 TGGTACCTGCTCAGGACCCCCCGCACTGTCCCAATCCCACT TGGTACCTGCTCAGGACCCCCTGCACTGTCCCAATCCCACT < 41bp 0.539668793682372 0.745687622821887 0.04343185 0.13457206 prediction 0.41203765827903 Functional Gain - RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55901188 chr19:55901189 . . 0 22 hm5C_associated_SNPs_126718 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350201 chr19:55901166-55901193
64251 chr14 24647370 24647370 1 + A G UCEC 24647367 + 24647347 24647387 41 ACTGTTCTGGGACAAGGAGACTCAGATCTCCCCGGAGAAAT ACTGTTCTGGGACAAGGAGACTCGGATCTCCCCGGAGAAAT < 41bp 0.606833123003567 0.812840699824744 0.7071245 0.778669 prediction 0.412015153642354 Functional Gain - REC8 ENSG00000100918 CDS Human protein_coding chr14:24647367 chr14:24647370 nonsynonymous SNV 0.988 1 24 hm5C_associated_SNPs_126720 0 0 2 BUD13 POSTAR2 ENCODE chr14:24647367-24647411
64251 chr10 69934077 69934077 1 + C A rs138583865 69934076 + 69934056 69934096 41 CTGTGGCCCCTTCCAGCTCTCCGGTGTTCACTTTGAGCAGC CTGTGGCCCCTTCCAGCTCTCAGGTGTTCACTTTGAGCAGC < 41bp 0.426484300731297 0.706000696075795 0.7251496 0.93293595 prediction 0.41200139215159 Functional Gain - MYPN ENSG00000138347 CDS Human protein_coding chr10:69934076 chr10:69934077 nonsynonymous SNV 0.836 4 22 hm5C_associated_SNPs_126721 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr10:69934071-69934120
64251 chr20 57766178 57766178 1 + T C COAD 57766176 + 57766156 57766196 41 GGTGGCCAGGCCTCACCTCACCTGACCCTGGGCCCTGTCCT GGTGGCCAGGCCTCACCTCACCCGACCCTGGGCCCTGTCCT < 41bp 0.581276072321415 0.787276728392683 0.46269006 0.39910936 prediction 0.412001312142536 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57766176 chr20:57766178 nonsynonymous SNV 0.918 3 23 hm5C_associated_SNPs_126722 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:57766160-57766180
64251 chr1 215793872 215793872 1 + C A SARC 215793871 + 215793851 215793891 41 CCGATGGAGGAACTGACTCACCTGGTACTGCGTCCCCATCT CCGATGGAGGAACTGACTCACATGGTACTGCGTCCCCATCT < 41bp 0.446669557836918 0.706000578120754 0.08714637 0.4050381 prediction 0.412001156241508 Functional Gain - KCTD3 ENSG00000136636 CDS Human protein_coding chr1:215793871 chr1:215793872 nonsynonymous SNV 0.404 3 22 hm5C_associated_SNPs_126723 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr1:215793842-215793880
64251 chr12 54448820 54448820 1 + T A HNSC 54448818 + 54448798 54448838 41 ATCTGGTTCCAAAACCGTCGCATGAAATGGAAGAAGGACCA ATCTGGTTCCAAAACCGTCGCAAGAAATGGAAGAAGGACCA < 41bp 0.51901569758337 0.725016263287862 0.124740124 0.28772506 prediction 0.412001131408985 Functional Gain - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448818 chr12:54448820 nonsynonymous SNV 1.000 5 23 hm5C_associated_SNPs_126724 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:54448799-54448828
64251 chr17 61684733 61684733 1 + T C BLCA 61684730 + 61684710 61684750 41 GGAGGACAGAGAGAAGAAGGCTGTGAACCTAGAGCGTGCCC GGAGGACAGAGAGAAGAAGGCTGCGAACCTAGAGCGTGCCC < 41bp 0.551370636922036 0.757363944216461 0.09241083 0.10360038 prediction 0.411986614588851 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61684730 chr17:61684733 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_126727 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:61684687-61684821
64251 chr7 6182606 6182606 1 + C T CESC 6182605 + 6182585 6182625 41 CATTGGAGCAGTTTGTGAAGCCGGAACAGCTTGATGGAGAA CATTGGAGCAGTTTGTGAAGCTGGAACAGCTTGATGGAGAA < 41bp 0.626550293259514 0.832538036129381 0.1837171 0.2515994 prediction 0.411975485739734 Functional Gain - USP42 ENSG00000106346 CDS Human protein_coding chr7:6182605 chr7:6182606 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_126729 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6182581-6182619
64251 chr3 5246761 5246761 1 + T C LIHC 5246759 + 5246739 5246779 41 TTTATTTTTGCAGGCAATGTCGTGAACATTCAGACGGGCCA TTTATTTTTGCAGGCAATGTCGCGAACATTCAGACGGGCCA < 41bp 0.667849674963774 0.873837334376858 0.62297565 0.50491095 prediction 0.411975318826168 Functional Gain - EDEM1 ENSG00000134109 CDS Human protein_coding chr3:5246759 chr3:5246761 nonsynonymous SNV 0.890 2 23 hm5C_associated_SNPs_126730 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:5246753-5246772
64251 chr1 46032600 46032600 1 + C T COAD 46032599 + 46032579 46032619 41 GTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCC GTGGAACACCAAGCACCACCCTGAGGATGTGGAGCCTGCCC < 41bp 0.611929630714986 0.817915542998487 0.37946737 0.13621822 prediction 0.411971824567002 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46032599 chr1:46032600 synonymous SNV . 0 22 hm5C_associated_SNPs_126732 0 0 10 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:46032578-46032614
64251 chr1 44446826 44446826 1 + C G STAD 44446825 + 44446805 44446845 41 ACTGGGCGGGCCAGTGGCCGCCTGCGGGATGAGCAGACTGC ACTGGGCGGGCCAGTGGCCGCGTGCGGGATGAGCAGACTGC < 41bp 0.552012109930036 0.757987919573609 0.19883117 0.2535379 prediction 0.411951619287145 Functional Gain - B4GALT2 ENSG00000117411 CDS Human protein_coding chr1:44446825 chr1:44446826 synonymous SNV . 0 22 hm5C_associated_SNPs_126735 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:44446815-44446849
64251 chr4 57797293 57797293 1 + C T SKCM 57797292 + 57797272 57797312 41 TCTCCTCCCATGGAGGTGGTCCAGAAGGAACCTGTTAAGAT TCTCCTCCCATGGAGGTGGTCTAGAAGGAACCTGTTAAGAT < 41bp 0.51299251565959 0.718957815929495 0.3347758 0.4235749 prediction 0.411930600539811 Functional Gain - REST ENSG00000084093 CDS Human protein_coding chr4:57797292 chr4:57797293 stopgain 0.005 0 22 hm5C_associated_SNPs_126739 0 0 1 ZNF622 POSTAR2 ENCODE chr4:57797281-57797368
64251 chr3 180667072 180667072 1 + A G LUSC 180667069 + 180667049 180667089 41 TCTTAAGTGACATGCATTTGCGAAGTATTCGTACGAAGTTG TCTTAAGTGACATGCATTTGCGAGGTATTCGTACGAAGTTG < 41bp 0.588543043576559 0.794505802020132 0.55834484 0.9032775 prediction 0.411925516887147 Functional Gain - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180667069 chr3:180667072 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_126741 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:180667053-180667103
64251 chr21 27066109 27066109 1 + C T THYM 27066108 + 27066088 27066128 41 GAGATGATAGATTTCAATATCCGGATCAAAAATGTGACAAG GAGATGATAGATTTCAATATCTGGATCAAAAATGTGACAAG < 41bp 0.61796646512078 0.823927997607961 0.67084664 0.2263985 prediction 0.411923064974362 Functional Gain - JAM2 ENSG00000154721 CDS Human protein_coding chr21:27066108 chr21:27066109 nonsynonymous SNV 0.979 2 22 hm5C_associated_SNPs_126742 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:27066097-27066128
64251 chr20 61468607 61468607 1 + C T rs138477294 61468606 + 61468586 61468626 41 CACTGGGGAGCTGGGAGACCCCGGGCCCAGAGGTGAGTGTT CACTGGGGAGCTGGGAGACCCTGGGCCCAGAGGTGAGTGTT < 41bp 0.470482777285864 0.705958182424767 0.9052148 0.8878078 prediction 0.411916364849534 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61468606 chr20:61468607 synonymous SNV . 0 22 hm5C_associated_SNPs_126744 1 0 2 PPIG POSTAR2 ENCODE chr20:61468585-61468616
64251 chr9 131262415 131262415 1 + C A rs144331164 131262414 + 131262394 131262434 41 GAGCAGTCCGAGAGCACCAACCGCAGCATGCAGAACTACGT GAGCAGTCCGAGAGCACCAACAGCAGCATGCAGAACTACGT < 41bp 0.471593679233312 0.705956962701603 0.37728557 0.29910916 prediction 0.411913925403205 Functional Gain - ODF2 ENSG00000136811 CDS Human protein_coding chr9:131262414 chr9:131262415 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_126745 0 0 1 DGCR8 POSTAR2 ENCODE chr9:131262390-131262421
64251 chr10 131565160 131565160 1 + C T COAD 131565159 + 131565139 131565179 41 CTTCTGGCCCATGAAGGCCACCGGTTGGGGAAGCCAGGCTT CTTCTGGCCCATGAAGGCCACTGGTTGGGGAAGCCAGGCTT < 41bp 0.559159229846833 0.765107879028518 0.62293065 0.725251 prediction 0.41189729836337 Functional Gain - MGMT ENSG00000170430 CDS Human protein_coding chr10:131565159 chr10:131565160 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_126749 0 0 3 GRSF1 POSTAR2 ENCODE chr10:131565158-131565252
64251 chr19 57743127 57743127 1 + A G STAD 57743124 + 57743104 57743144 41 TTTCAGTGGCTACAGCAAACCAAACAGCCCAGCAGCCCAGC TTTCAGTGGCTACAGCAAACCAAGCAGCCCAGCAGCCCAGC < 41bp 0.451871414265025 0.705946046961234 0.18606302 0.26977605 prediction 0.411892093922469 Functional Gain - AURKC ENSG00000105146 CDS Human protein_coding chr19:57743124 chr19:57743127 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_126750 0 0 1 ILF3 POSTAR2 ENCODE chr19:57743003-57743138
64251 chr14 23564766 23564766 1 + C G rs17126531 23564765 + 23564745 23564785 41 TTCAGGAAATTTGGAAGCTGCCGCAGTAGTTGGAGTCTAAG TTCAGGAAATTTGGAAGCTGCGGCAGTAGTTGGAGTCTAAG < 41bp 0.436908504923528 0.705929123890268 0.77118474 0.8894274 prediction 0.411858247780535 Functional Gain - ACIN1;C14orf119 ENSG00000100813;ENSG00000179933 UTR5 Human other chr14:23564765 chr14:23564766 . . 0 22 hm5C_associated_SNPs_126755 0 0 12 CPSF3 POSTAR2 GSE37401,GSM917668 chr14:23564743-23564767
64251 chr11 123988407 123988407 1 + T C STAD 123988405 + 123988385 123988425 41 CTGAAGAGTATCTCTGTGAGCGTGAACATTTACGAGTTTGT CTGAAGAGTATCTCTGTGAGCGCGAACATTTACGAGTTTGT < 41bp 0.417282094713988 0.705924852078953 0.059694976 0.07435086 prediction 0.411849704157905 Functional Gain - VWA5A ENSG00000110002 CDS Human protein_coding chr11:123988405 chr11:123988407 nonsynonymous SNV 0.027 0 23 hm5C_associated_SNPs_126758 0 0 1 DDX3X POSTAR2 ENCODE chr11:123988379-123988412
64251 chr18 77808882 77808882 1 + T C rs559329345 77808880 + 77808860 77808900 41 TTGCAGGGGATCCAACCAGGCGTCGGCTCAGTGCCTCCTAG TTGCAGGGGATCCAACCAGGCGCCGGCTCAGTGCCTCCTAG < 41bp 0.509483878380914 0.71539902200301 0.07107583 0.06045264 prediction 0.411830287244191 Functional Gain - RBFA ENSG00000261126 ncRNA_intronic Human lincRNA chr18:77808880 chr18:77808882 . . 0 23 hm5C_associated_SNPs_126764 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350201 chr18:77808875-77808891
64251 chr17 66042674 66042674 1 + C A BLCA 66042673 + 66042653 66042693 41 ACCTCTGAAGGCTACACTTTCCAAGTTCAGGATGGGGCTCC ACCTCTGAAGGCTACACTTTCAAAGTTCAGGATGGGGCTCC < 41bp 0.444282663341034 0.705910123268823 0.30263108 0.79628056 prediction 0.411820246537646 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66042673 chr17:66042674 nonsynonymous SNV 0.997 0 22 hm5C_associated_SNPs_126765 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:66042641-66042676
64251 chr19 54625258 54625258 1 + C T STAD 54625257 + 54625237 54625277 41 AGTGATGGGACCAGTGGAGGCCGCGCCTGAATACCGCGTCA AGTGATGGGACCAGTGGAGGCTGCGCCTGAATACCGCGTCA < 41bp 0.599418820732973 0.805326253588879 0.28286338 0.2377463 prediction 0.411814865711812 Functional Gain - PRPF31 ENSG00000105618 CDS Human protein_coding chr19:54625257 chr19:54625258 synonymous SNV . 0 22 hm5C_associated_SNPs_126766 0 0 7 DDX24 POSTAR2 ENCODE chr19:54625238-54625312
64251 chr3 39430993 39430993 1 + C T STAD 39430992 + 39430972 39431012 41 GTCTTATCCTGCAGTTACATCCGGTGATCAAGGCTTTCCTG GTCTTATCCTGCAGTTACATCTGGTGATCAAGGCTTTCCTG < 41bp 0.590121503254682 0.79602552899305 0.92818904 0.4218492 prediction 0.411808051476737 Functional Gain - SLC25A38 ENSG00000144659 CDS Human protein_coding chr3:39430992 chr3:39430993 nonsynonymous SNV 0.042 4 22 hm5C_associated_SNPs_126768 0 0 1 SF3B4 POSTAR2 ENCODE chr3:39430934-39431005
64251 chr1 212792438 212792438 1 + A G COAD 212792435 + 212792415 212792455 41 ACCTGCATATGGGCTGTTGACTCATGCAAATGAGGTATCTG ACCTGCATATGGGCTGTTGACTCGTGCAAATGAGGTATCTG < 41bp 0.474141947408731 0.70590117987957 0.32853866 0.25230682 prediction 0.411802359759139 Functional Gain - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212792435 chr1:212792438 synonymous SNV . 0 24 hm5C_associated_SNPs_126769 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:212792410-212792440
64251 chr2 228190001 228190001 1 + C G rs28365989 228190000 + 228189980 228190020 41 CCGCGCCTTTCGCGCTTCTGCCCTGGCCCTCTGCGGGCCGC CCGCGCCTTTCGCGCTTCTGCGCTGGCCCTCTGCGGGCCGC < 41bp 0.665502843710587 0.871401922126115 0.26294404 0.39961278 prediction 0.411798156831055 Functional Gain - MFF ENSG00000168958 UTR5 Human protein_coding chr2:228190000 chr2:228190001 . . 0 22 hm5C_associated_SNPs_126770 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:228190000-228190040
64251 chr7 100730858 100730858 1 + C T BLCA 100730857 + 100730837 100730877 41 CTGCTGGACCTGGTGAAGGCCCGGGCCTGTGGAGACCTGCG CTGCTGGACCTGGTGAAGGCCTGGGCCTGTGGAGACCTGCG < 41bp 0.481564563084813 0.705898911353913 0.33644882 0.3417545 prediction 0.411797822707827 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100730857 chr7:100730858 nonsynonymous SNV 0.220 4 22 hm5C_associated_SNPs_126771 0 0 9 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:100730855-100730882
64251 chr7 30634548 30634548 1 + C G rs62636572 30634547 + 30634527 30634567 41 GCCGCAGGCTCATGCCCTCTCCGCGTCCAGTGCTGCTTAGA GCCGCAGGCTCATGCCCTCTCGGCGTCCAGTGCTGCTTAGA < 41bp 0.685114620039341 0.890998755052237 0.67795086 0.91846496 prediction 0.411768270025792 Functional Gain - GARS ENSG00000106105 CDS Human protein_coding chr7:30634547 chr7:30634548 nonsynonymous SNV 0.327 0 22 hm5C_associated_SNPs_126776 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:30634534-30634556
64251 chr3 126445989 126445989 1 + C A PRAD 126445985 + 126445965 126446005 41 ACCCCCTGCTCCCACATCTTCTACCTTTGGCCTTCAAGATG ACCCCCTGCTCCCACATCTTCTACATTTGGCCTTCAAGATG < 41bp 0.274719370382517 0.705880246997735 0.014547855 0.13025805 prediction 0.41176049399547 Functional Gain - CHCHD6 ENSG00000159685 CDS Human protein_coding chr3:126445985 chr3:126445989 synonymous SNV . 0 25 hm5C_associated_SNPs_126778 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:126445972-126446002
64251 chr15 29397678 29397678 1 + A G BRCA 29397675 + 29397655 29397695 41 TCAACCCCGAAGACTTGAGCCAGAAGGAATACAGCGACATC TCAACCCCGAAGACTTGAGCCAGGAGGAATACAGCGACATC < 41bp 0.589606968065621 0.795484715864398 0.13828456 0.26458532 prediction 0.411755495597554 Functional Gain - APBA2 ENSG00000034053 CDS Human protein_coding chr15:29397675 chr15:29397678 nonsynonymous SNV 0.994 2 24 hm5C_associated_SNPs_126781 0 0 1 ZNF622 POSTAR2 ENCODE chr15:29397642-29397679
64251 chr1 156347926 156347926 1 + C T SKCM 156347925 + 156347905 156347945 41 GAGTTTGTGCTCCTTCATCTCCTGGGGGTGAGAGTCTGGGG GAGTTTGTGCTCCTTCATCTCTTGGGGGTGAGAGTCTGGGG < 41bp 0.597820060535823 0.803694233652991 0.39922878 0.19675708 prediction 0.411748346234334 Functional Gain - RHBG ENSG00000132677 CDS Human protein_coding chr1:156347925 chr1:156347926 synonymous SNV . 0 22 hm5C_associated_SNPs_126784 0 0 2 PPIG POSTAR2 ENCODE chr1:156347921-156347926
64251 chr8 21958400 21958400 1 + C T rs138222967 21958399 + 21958379 21958419 41 CACCGACAGCTTCCTGGATTCCGGCTTTCAAACTCCCGCAA CACCGACAGCTTCCTGGATTCTGGCTTTCAAACTCCCGCAA < 41bp 0.456427467722208 0.705869529705995 0.13855407 0.08103326 prediction 0.41173905941199 Functional Gain - FAM160B2 ENSG00000158863 CDS Human protein_coding chr8:21958399 chr8:21958400 synonymous SNV . 0 22 hm5C_associated_SNPs_126788 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:21958399-21958424
64251 chr20 35835810 35835810 1 + T C GBM 35835808 + 35835788 35835828 41 ACGTGCCAGTTGTGGTTGTGCCTGAGGGCTCTGCTTCCGAC ACGTGCCAGTTGTGGTTGTGCCCGAGGGCTCTGCTTCCGAC < 41bp 0.671201254167081 0.877048893476703 0.054295152 0.041061074 prediction 0.411695278619244 Functional Gain - RPN2 ENSG00000118705 CDS Human protein_coding chr20:35835808 chr20:35835810 synonymous SNV . 0 23 hm5C_associated_SNPs_126794 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:35835777-35835821
64251 chrX 152027348 152027348 1 + T C UCEC 152027345 + 152027325 152027365 41 AGCTCTGAAAGGTGTAAACACAGTTTTCCACTGTGCGTCAC AGCTCTGAAAGGTGTAAACACAGCTTTCCACTGTGCGTCAC < 41bp 0.547057112075188 0.752901026313235 0.30891615 0.30160505 prediction 0.411687828476095 Functional Gain - NSDHL ENSG00000147383 CDS Human protein_coding chrX:152027345 chrX:152027348 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_126795 0 0 1 SF3B4 POSTAR2 ENCODE chrX:152027253-152027366
64251 chr1 223940633 223940633 1 + C T COAD 223940632 + 223940612 223940652 41 GAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCAGGAACT GAACTGGAGGCGGGGCTCCACTGCGGGAGGTTGCAGGAACT < 41bp 0.468621162806936 0.705843345639713 0.83663344 0.7813808 prediction 0.411686691279426 Functional Gain - CAPN2 ENSG00000162909 CDS Human protein_coding chr1:223940632 chr1:223940633 synonymous SNV . 0 22 hm5C_associated_SNPs_126796 0 0 7 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:223940602-223940640
64251 chr19 50154315 50154315 1 + C T SKCM 50154314 + 50154294 50154334 41 ACCCCCAGCCCCACCTGCCCCCCGATTCGATATCTATGACC ACCCCCAGCCCCACCTGCCCCTCGATTCGATATCTATGACC < 41bp 0.612292350472715 0.818134234084793 0.07103264 0.9275038 prediction 0.411683767224156 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50154314 chr19:50154315 synonymous SNV . 0 22 hm5C_associated_SNPs_126797 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50154299-50154322
64251 chr6 37787457 37787457 1 + C G rs542378164 37787453 + 37787433 37787473 41 CGGTCCTCGGTGCGTCCGCACGCCCCTCCTCCTCGGCTCCC CGGTCCTCGGTGCGTCCGCACGCCGCTCCTCCTCGGCTCCC < 41bp 0.440532060811133 0.705841817336166 0.1314748 0.24879652 prediction 0.411683634672331 Functional Gain - ZFAND3 ENSG00000156639 UTR5 Human protein_coding chr6:37787453 chr6:37787457 . . 0 25 hm5C_associated_SNPs_126798 0 0 2 EIF3B POSTAR2 GSE65004,GSM1585667 chr6:37787454-37787488
64251 chr2 220072684 220072684 1 + C G UCEC 220072683 + 220072663 220072703 41 CTGACCTGTGAACGCTGTAGCCGAAACTTCTGCATCAAGCA CTGACCTGTGAACGCTGTAGCGGAAACTTCTGCATCAAGCA < 41bp 0.386475674711907 0.705839743770666 0.089797825 0.33739245 prediction 0.411679487541331 Functional Gain - ZFAND2B ENSG00000158552 CDS Human protein_coding chr2:220072683 chr2:220072684 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_126799 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:220072663-220072696
64251 chr3 38417713 38417713 1 + T C rs150775220 38417710 + 38417690 38417730 41 CAGTCCACAGAGATGGGCAACGGTGGAAACCTGGGTAGGCC CAGTCCACAGAGATGGGCAACGGCGGAAACCTGGGTAGGCC < 41bp 0.496434980592871 0.705835290802631 0.7157548 0.89266187 prediction 0.411670581605263 Functional Gain - XYLB ENSG00000093217 CDS Human protein_coding chr3:38417710 chr3:38417713 synonymous SNV . 0 24 hm5C_associated_SNPs_126800 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:38417701-38417722
64251 chr17 17970172 17970172 1 + T G rs140839416 17970169 + 17970149 17970189 41 GAGGTATTTGGGAAAGTAGCCAGTGGGCACTTGTGATATCT GAGGTATTTGGGAAAGTAGCCAGGGGGCACTTGTGATATCT < 41bp 0.332310176906309 0.705819756522877 0.2914229 0.89455485 prediction 0.411639513045753 Functional Gain - GID4 ENSG00000141034 UTR3 Human protein_coding chr17:17970169 chr17:17970172 . . 0 24 hm5C_associated_SNPs_126803 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:17970146-17970206
64251 chr4 74308069 74308069 1 + T G UCEC 74308065 + 74308045 74308085 41 TCCTGTATGCACCTACAATTCTTCTTTGGGCTGCTCGCTAT TCCTGTATGCACCTACAATTCTTCGTTGGGCTGCTCGCTAT < 41bp 0.516644506420922 0.722458983530507 0.011377633 0.016200483 prediction 0.411628954219171 Functional Gain - AFP ENSG00000081051 CDS Human protein_coding chr4:74308065 chr4:74308069 nonsynonymous SNV 0.016 0 25 hm5C_associated_SNPs_126804 0 0 6 IGF2BP3 POSTAR2 ENCODE chr4:74308023-74308086
64251 chr16 11769893 11769893 1 + C G rs8191327 11769889 + 11769869 11769909 41 GGCCACCCCCAAAGTGCTGCCAGCCGAGGAAGCCCCCAGCA GGCCACCCCCAAAGTGCTGCCAGCGGAGGAAGCCCCCAGCA < 41bp 0.59427996933552 0.800089927096808 0.5025146 0.8133924 prediction 0.411619915522576 Functional Gain - SNN ENSG00000184602 UTR5 Human protein_coding chr16:11769889 chr16:11769893 . . 0 25 hm5C_associated_SNPs_126805 0 0 1 DDX3X POSTAR2 ENCODE chr16:11769857-11769905
64251 chr17 25630642 25630642 1 + A G COAD 25630639 + 25630619 25630659 41 GGGTTGAACAATGGGCGTATCAAAATATGGGATGTATATAC GGGTTGAACAATGGGCGTATCAAGATATGGGATGTATATAC < 41bp 0.56282961874958 0.768638363241098 0.20777872 0.34377316 prediction 0.411617488983036 Functional Gain - WSB1 ENSG00000109046 CDS Human protein_coding chr17:25630639 chr17:25630642 synonymous SNV . 0 24 hm5C_associated_SNPs_126806 0 0 3 ZC3H7B POSTAR2 GSE38201,GSM936510 chr17:25630635-25630647
64251 chr6 117825024 117825024 1 + A G HNSC 117825021 + 117825001 117825041 41 TACCCCAATCACACTGTTTGCGAAAAGACAATTACAGTACC TACCCCAATCACACTGTTTGCGAGAAGACAATTACAGTACC < 41bp 0.559206749712052 0.765009588584218 0.0843052 0.43391705 prediction 0.411605677744332 Functional Gain - DCBLD1 ENSG00000164465 CDS Human protein_coding chr6:117825021 chr6:117825024 synonymous SNV . 0 24 hm5C_associated_SNPs_126808 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr6:117825023-117825024
64251 chr3 49742457 49742457 1 + T G UCEC 49742454 + 49742434 49742474 41 GGCTGTTGGGGGGCCACTGCCCCTGCCCCGGCCCGGCTGGC GGCTGTTGGGGGGCCACTGCCCCGGCCCCGGCCCGGCTGGC < 41bp 0.298863049371569 0.705794392662647 0.24422309 0.52540845 prediction 0.411588785325294 Functional Gain - RNF123 ENSG00000164068 CDS Human protein_coding chr3:49742454 chr3:49742457 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_126812 0 0 7 FUS POSTAR2 GSE43308,GSM1060381 chr3:49742440-49742460
64251 chrX 68725644 68725644 1 + C T SKCM 68725643 + 68725623 68725663 41 GCGGCCCCCTGACTCCCTTTCCCGTGCCCCGGCCGAGTTCC GCGGCCCCCTGACTCCCTTTCTCGTGCCCCGGCCGAGTTCC < 41bp 0.457732465367787 0.705788245367078 0.1793218 0.23938027 prediction 0.411576490734155 Functional Gain - FAM155B ENSG00000130054 CDS Human protein_coding chrX:68725643 chrX:68725644 synonymous SNV . 0 22 hm5C_associated_SNPs_126814 0 0 3 UPF1 POSTAR2 GSE69586,GSM1704214 chrX:68725629-68725650
64251 chr5 256700 256700 1 + A G rs550992277 256697 + 256677 256717 41 GGCTGGGAGCTTGCCAGGAACCCAGTGGCCAGGGAGCGTGG GGCTGGGAGCTTGCCAGGAACCCGGTGGCCAGGGAGCGTGG < 41bp 0.598951481588757 0.804734883043534 0.22129807 0.64041954 prediction 0.411566802909556 Functional Gain - SDHA ENSG00000073578 UTR3 Human protein_coding chr5:256697 chr5:256700 . . 0 24 hm5C_associated_SNPs_126817 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:256607-256701
64251 chr12 32369322 32369322 1 + A G LIHC 32369319 + 32369299 32369339 41 AGATGCAGAACGAGCTGAAACAGAGCCGGGCTGTGGTCACT AGATGCAGAACGAGCTGAAACAGGGCCGGGCTGTGGTCACT < 41bp 0.618475342404683 0.824258488081148 0.8367628 0.90026945 prediction 0.411566291352929 Functional Gain - BICD1 ENSG00000151746 CDS Human protein_coding chr12:32369319 chr12:32369322 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_126818 0 0 1 UCHL5 POSTAR2 ENCODE chr12:32369195-32369400
64251 chr9 100845291 100845291 1 + T C LIHC 100845289 + 100845269 100845309 41 ACTGTTGAAGAGGATGACACCATCATGGAAGAATTGGTAGA ACTGTTGAAGAGGATGACACCACCATGGAAGAATTGGTAGA < 41bp 0.435911733773416 0.705781391215694 0.09844673 0.10484919 prediction 0.411562782431388 Functional Gain - NANS ENSG00000095380 CDS Human protein_coding chr9:100845289 chr9:100845291 nonsynonymous SNV 0.981 3 23 hm5C_associated_SNPs_126819 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:100845256-100845292
64251 chr3 196304421 196304421 1 + A G UCS 196304418 + 196304398 196304438 41 TTTACATCGAAACCCCATTGCTCAGAGCACTGATGGTGCAA TTTACATCGAAACCCCATTGCTCGGAGCACTGATGGTGCAA < 41bp 0.467054181947512 0.705777569985953 0.37383926 0.47505128 prediction 0.411555139971905 Functional Gain - FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196304418 chr3:196304421 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_126821 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr3:196304391-196304422
64251 chr1 53427248 53427248 1 + C A THCA 53427244 + 53427224 53427264 41 ATAAGTATGGATTGTCTGCTCACCCAGTTGCTCCTCAGATG ATAAGTATGGATTGTCTGCTCACCAAGTTGCTCCTCAGATG < 41bp 0.321084361443393 0.705775835160405 0.066596955 0.14731377 prediction 0.41155167032081 Functional Gain - SCP2 ENSG00000116171 CDS Human protein_coding chr1:53427244 chr1:53427248 nonsynonymous SNV 0.523 4 25 hm5C_associated_SNPs_126822 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr1:53427223-53427250
64251 chr15 42704209 42704209 1 + T C rs557841106 42704207 + 42704187 42704227 41 ACAAACCCTTGTCCCTTTGCCATGTGGAGGAAAGTGCCTGC ACAAACCCTTGTCCCTTTGCCACGTGGAGGAAAGTGCCTGC < 41bp 0.532838084273131 0.738605236025676 0.5142321 0.54853135 prediction 0.411534303505088 Functional Gain - CAPN3 ENSG00000258461 ncRNA_exonic Human protein_coding chr15:42704207 chr15:42704209 . . 0 23 hm5C_associated_SNPs_126823 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr15:42704200-42704220
64251 chr2 223423474 223423474 1 + T C UCEC 223423472 + 223423452 223423492 41 CTCACTGCAAGTATTATACTCATGGTTCAAGGTGGTCACCA CTCACTGCAAGTATTATACTCACGGTTCAAGGTGGTCACCA < 41bp 0.640922026001283 0.846688427494084 0.27110934 0.23131841 prediction 0.411532802985602 Functional Gain - SGPP2 ENSG00000163082 CDS Human protein_coding chr2:223423472 chr2:223423474 nonsynonymous SNV 0.655 2 23 hm5C_associated_SNPs_126824 0 0 2 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr2:223423441-223423474
64251 chr9 124064424 124064424 1 + T C STAD 124064421 + 124064401 124064441 41 AGCTGAGGAACGGAAATCTGCAGTATGACCTCCACTACTGG AGCTGAGGAACGGAAATCTGCAGCATGACCTCCACTACTGG < 41bp 0.509844250723131 0.715595452570992 0.05757612 0.096687526 prediction 0.411502403695722 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124064421 chr9:124064424 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_126831 0 0 3 RPS3 POSTAR2 ENCODE chr9:124064240-124064447
64251 chr17 73484865 73484865 1 + C T ACC 73484864 + 73484844 73484884 41 ACGAGCACATCGTCCTGGAGCCGGGAGACCTCTTCCCCCCC ACGAGCACATCGTCCTGGAGCTGGGAGACCTCTTCCCCCCC < 41bp 0.603807302997072 0.809551282769787 0.9386033 0.5903406 prediction 0.41148795954543 Functional Gain - TMEM94 ENSG00000177728 CDS Human protein_coding chr17:73484864 chr17:73484865 nonsynonymous SNV 0.994 2 22 hm5C_associated_SNPs_126833 0 0 2 AARS POSTAR2 ENCODE chr17:73484839-73484877
64251 chr1 90152120 90152120 1 + T A SKCM 90152116 + 90152096 90152136 41 CCATGGTGGGATGTGTTTACCGATTACCTCTCAGTAGCCAT CCATGGTGGGATGTGTTTACCGATAACCTCTCAGTAGCCAT < 41bp 0.391424299941551 0.705742474705958 0.08991963 0.12783667 prediction 0.411484949411915 Functional Gain - LRRC8C ENSG00000171488;ENSG00000271949 CDS Human other chr1:90152116 chr1:90152120 nonsynonymous SNV 0.972 4 25 hm5C_associated_SNPs_126834 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr1:90152120-90152121
64251 chr19 40480515 40480515 1 + T C LIHC 40480512 + 40480492 40480532 41 GCGGGAGGCCGTGGAGCTCCCGCTCACGCATTTCGAGCTCT GCGGGAGGCCGTGGAGCTCCCGCCCACGCATTTCGAGCTCT < 41bp 0.55374066528416 0.759479869718725 0.5704779 0.6178977 prediction 0.41147840886913 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40480512 chr19:40480515 nonsynonymous SNV 0.045 5 24 hm5C_associated_SNPs_126837 0 0 5 FMR1 POSTAR2 ENCODE chr19:40480457-40480517
64251 chr6 26020783 26020783 1 + C G rs61735215 26020782 + 26020762 26020802 41 GGCGCCACGCAAACAGTTGGCCACTAAGGCAGCCCGCAAAA GGCGCCACGCAAACAGTTGGCGACTAAGGCAGCCCGCAAAA < 41bp 0.394626357242083 0.705737188584397 0.02992028 0.12766552 prediction 0.411474377168794 Functional Gain - HIST1H3A ENSG00000198366 CDS Human other chr6:26020782 chr6:26020783 synonymous SNV . 0 22 hm5C_associated_SNPs_126839 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26020780-26020800
64251 chr12 57180967 57180967 1 + T C UCEC 57180964 + 57180944 57180984 41 AGCACAAACCTGAACCTGGTCACTGACTGCATGGAACATGC AGCACAAACCTGAACCTGGTCACCGACTGCATGGAACATGC < 41bp 0.479726311135643 0.705730925209057 0.026449978 0.04367277 prediction 0.411461850418115 Functional Gain - HSD17B6 ENSG00000025423 CDS Human protein_coding chr12:57180964 chr12:57180967 synonymous SNV . 0 24 hm5C_associated_SNPs_126841 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:57180946-57180981
64251 chr2 219297606 219297606 1 + C A LUAD 219297605 + 219297585 219297625 41 AATGGTGAACCAGTCCAGATCCGGGTCCCAATGGGCAAGGA AATGGTGAACCAGTCCAGATCAGGGTCCCAATGGGCAAGGA < 41bp 0.64449579209981 0.850221214494133 0.8626996 0.8895156 prediction 0.411450844788646 Functional Gain - VIL1 ENSG00000127831 CDS Human protein_coding chr2:219297605 chr2:219297606 synonymous SNV . 0 22 hm5C_associated_SNPs_126842 0 0 2 GRWD1 POSTAR2 ENCODE chr2:219297551-219297638
64251 chr19 17212517 17212517 1 + C A rs199949514 17212513 + 17212493 17212533 41 CCTGGGAGGCATGCTGAAGCCAGGCGGCCGGCAGGATGAGT CCTGGGAGGCATGCTGAAGCCAGGAGGCCGGCAGGATGAGT < 41bp 0.653936564763415 0.859655806992646 0.56658435 0.71524024 prediction 0.411438484458461 Functional Gain - MYO9B ENSG00000099331 UTR5 Human protein_coding chr19:17212513 chr19:17212517 . . 0 25 hm5C_associated_SNPs_126844 0 0 1 DDX3X POSTAR2 ENCODE chr19:17212469-17212568
64251 chr4 38690448 38690448 1 + C A ESCA 38690444 + 38690424 38690464 41 GCCTGGGTTGAGCATGCCTTCTTCCAGCCCACCGATAAAAA GCCTGGGTTGAGCATGCCTTCTTCAAGCCCACCGATAAAAA < 41bp 0.271063730996972 0.705717439169788 0.24543348 0.22314867 prediction 0.411434878339577 Functional Gain - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38690444 chr4:38690448 synonymous SNV . 0 25 hm5C_associated_SNPs_126845 0 0 4 DDX6 POSTAR2 ENCODE chr4:38690386-38690498
64251 chr13 80107501 80107501 1 + T C UCEC 80107498 + 80107478 80107518 41 TTTTATCCCGTGCCACCTCCCTATAGCGTTGCTACCTCTCT TTTTATCCCGTGCCACCTCCCTACAGCGTTGCTACCTCTCT < 41bp 0.563370346475818 0.769083563926692 0.106989205 0.39535654 prediction 0.411426434901748 Functional Gain - NDFIP2 ENSG00000102471 CDS Human protein_coding chr13:80107498 chr13:80107501 synonymous SNV . 0 24 hm5C_associated_SNPs_126847 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:80107477-80107503
64251 chr16 67000764 67000764 1 + C T rs201488278 67000763 + 67000743 67000783 41 ATGAGTTCAGCTGGCTCATCCCCAGGGTGAGTTGCTCCCAC ATGAGTTCAGCTGGCTCATCCTCAGGGTGAGTTGCTCCCAC < 41bp 0.455154087831723 0.705705798315728 0.38168305 0.3041194 prediction 0.411411596631455 Functional Gain - CES3 ENSG00000172828 CDS Human protein_coding chr16:67000763 chr16:67000764 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_126850 0 0 2 PRPF8 POSTAR2 ENCODE chr16:67000760-67000816
64251 chr11 65819873 65819873 1 + C T BRCA 65819872 + 65819852 65819892 41 TAAGATGGCGACGGAGCATCCCGAGCCTCCCAAAGCAGAAT TAAGATGGCGACGGAGCATCCTGAGCCTCCCAAAGCAGAAT < 41bp 0.517065607917202 0.722767868291404 0.12042293 0.1735841 prediction 0.411404520748404 Functional Gain - SF3B2 ENSG00000087365 CDS Human protein_coding chr11:65819872 chr11:65819873 synonymous SNV . 0 22 hm5C_associated_SNPs_126853 0 0 7 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:65819840-65819880
64251 chr21 42762541 42762541 1 + T A LUAD 42762539 + 42762519 42762559 41 CAGAGGCAGCAGACGATCAACTTGGTGGTGGTTCCCTGTAA CAGAGGCAGCAGACGATCAACTAGGTGGTGGTTCCCTGTAA < 41bp 0.508885018960578 0.714573571167859 0.50966704 0.75402385 prediction 0.411377104414562 Functional Gain - MX2 ENSG00000183486 CDS Human protein_coding chr21:42762539 chr21:42762541 stopgain 0.995 0 23 hm5C_associated_SNPs_126863 0 0 1 PPIG POSTAR2 ENCODE chr21:42762515-42762628
64251 chr19 36606534 36606534 1 + C T LUAD 36606533 + 36606513 36606553 41 CTCCCTCAACACCTTCCGCTCCGAGAAGCGATACAGCCGCA CTCCCTCAACACCTTCCGCTCTGAGAAGCGATACAGCCGCA < 41bp 0.480986449559488 0.705678418111021 0.33034956 0.13065884 prediction 0.411356836222042 Functional Gain - TBCB ENSG00000105254 CDS Human protein_coding chr19:36606533 chr19:36606534 synonymous SNV . 0 22 hm5C_associated_SNPs_126867 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:36606440-36606560
64251 chr14 61346478 61346478 1 + T C STAD 61346475 + 61346455 61346495 41 TATTCACAAGCTTGAAGAAGCTCTGTATGAATACCAGCCAC TATTCACAAGCTTGAAGAAGCTCCGTATGAATACCAGCCAC < 41bp 0.573461946277871 0.779138760403672 0.083907604 0.18288252 prediction 0.411353628251602 Functional Gain - MNAT1 ENSG00000020426 CDS Human protein_coding chr14:61346475 chr14:61346478 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_126868 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chr14:61346457-61346482
64251 chrX 154444770 154444770 1 + T C ESCA 154444768 + 154444748 154444788 41 CGCATCCCCAAGATGGCGGCCGTTAAGGACAGTTGTGGCAA CGCATCCCCAAGATGGCGGCCGCTAAGGACAGTTGTGGCAA < 41bp 0.615432814305422 0.821107836264419 0.33807468 0.29478902 prediction 0.411350043917993 Functional Gain - VBP1 ENSG00000155959 CDS Human protein_coding chrX:154444768 chrX:154444770 nonsynonymous SNV 0.003 0 23 hm5C_associated_SNPs_126869 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:154444736-154444772
64251 chr3 30713816 30713816 1 + A G STAD 30713813 + 30713793 30713833 41 TGCCCATCGTGCACAGGGACCTCAAGAGCTCCAATATCCTC TGCCCATCGTGCACAGGGACCTCGAGAGCTCCAATATCCTC < 41bp 0.589951569023424 0.795626100078678 0.011398613 0.030727655 prediction 0.411349062110508 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30713813 chr3:30713816 nonsynonymous SNV 1.000 5 24 hm5C_associated_SNPs_126871 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr3:30713791-30713833
64251 chr3 9788941 9788941 1 + C T LUSC 9788940 + 9788920 9788960 41 GAGGGCCGCAAGTCCAACATCCGCAAGTCAGTACAGATCGC GAGGGCCGCAAGTCCAACATCTGCAAGTCAGTACAGATCGC < 41bp 0.440424742532848 0.705674268660192 0.13913438 0.29625827 prediction 0.411348537320385 Functional Gain - BRPF1 ENSG00000156983 CDS Human protein_coding chr3:9788940 chr3:9788941 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126872 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr3:9788940-9788960
64251 chr17 17380479 17380479 1 + C G CESC 17380476 + 17380456 17380496 41 AGCCGCCGCCGGTCCCTGCGCCTCAACCGCAGCAGTCGCCG AGCCGCCGCCGGTCCCTGCGCCTGAACCGCAGCAGTCGCCG < 41bp 0.502393463664608 0.708066584877065 0.17514428 0.15752676 prediction 0.411346242424912 Functional Gain - MED9 ENSG00000141026 CDS Human protein_coding chr17:17380476 chr17:17380479 nonsynonymous SNV 0.541 0 24 hm5C_associated_SNPs_126873 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr17:17380478-17380479
64251 chr15 78833036 78833036 1 + C A rs57064725 78833032 + 78833012 78833052 41 CCGCCTCCTCTGTGACGGACCGACCGCCGGGAATGGCCCCC CCGCCTCCTCTGTGACGGACCGACAGCCGGGAATGGCCCCC < 41bp 0.714941488805326 0.920606572213913 0.010515958 0.01897636 prediction 0.411330166817175 Functional Gain - PSMA4 ENSG00000041357 intronic Human protein_coding chr15:78833032 chr15:78833036 . . 0 25 hm5C_associated_SNPs_126875 0 1 1 EFTUD2 POSTAR2 ENCODE chr15:78833036-78833070
64251 chr8 124429131 124429131 1 + C G MESO 124429127 + 124429107 124429147 41 CGCTGCTGTCCACTACCAGCCGGCCAGCCCCCCGCGGGACG CGCTGCTGTCCACTACCAGCCGGCGAGCCCCCCGCGGGACG < 41bp 0.660590495748606 0.86625515848226 0.30782682 0.55858827 prediction 0.411329325467308 Functional Gain - WDYHV1 ENSG00000156795 CDS Human protein_coding chr8:124429127 chr8:124429131 synonymous SNV . 0 25 hm5C_associated_SNPs_126876 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:124429098-124429140
64251 chr1 156849053 156849053 1 + C T OV 156849052 + 156849032 156849072 41 GCGGGTCTGCATTTTGTGCACCGGGACCTGGCCACACGCAA GCGGGTCTGCATTTTGTGCACTGGGACCTGGCCACACGCAA < 41bp 0.606796182159956 0.812458565967656 0.64969075 0.385675 prediction 0.4113247676154 Functional Gain - NTRK1 ENSG00000198400 CDS Human protein_coding chr1:156849052 chr1:156849053 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_126877 0 0 1 RBM15 POSTAR2 ENCODE chr1:156849035-156849077
64251 chr17 41365901 41365901 1 + C A UCEC 41365900 + 41365880 41365920 41 ATGGGGACCAGAGGCTGAAGCCCAAGCACACGTAAGCCCCC ATGGGGACCAGAGGCTGAAGCACAAGCACACGTAAGCCCCC < 41bp 0.644162426957126 0.849806079478925 0.33148336 0.445668 prediction 0.411287305043599 Functional Gain - TMEM106A ENSG00000184988 CDS Human protein_coding chr17:41365900 chr17:41365901 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_126887 0 0 2 PPIG POSTAR2 ENCODE chr17:41365845-41365902
64251 chr1 54554360 54554360 1 + A G STAD 54554357 + 54554337 54554377 41 CACTGAGTGGAAAACTTTCACTGAAAAACATTCAAATAGAC CACTGAGTGGAAAACTTTCACTGGAAAACATTCAAATAGAC < 41bp 0.559539083445502 0.765179943303375 0.043367088 0.11398253 prediction 0.411281719715747 Functional Gain - TCEANC2 ENSG00000116205 CDS Human protein_coding chr1:54554357 chr1:54554360 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126888 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr1:54554353-54554394
64251 chrX 64721948 64721948 1 + C T UCEC 64721947 + 64721927 64721967 41 GGCTGTCCATTGCCCGTAAGCCTGAGGCTAGTTCTGTCCCC GGCTGTCCATTGCCCGTAAGCTTGAGGCTAGTTCTGTCCCC < 41bp 0.610176378551988 0.815810213874564 0.5412722 0.44716394 prediction 0.411267670645151 Functional Gain - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64721947 chrX:64721948 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_126890 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:64721943-64721985
64251 chr19 54024304 54024304 1 + C A rs12460681 54024303 + 54024283 54024323 41 ACAGTCCAATGAGGAGCGAGCCGGGTGGCCGGCTGAGGGGC ACAGTCCAATGAGGAGCGAGCAGGGTGGCCGGCTGAGGGGC < 41bp 0.609618072674832 0.815244024413388 0.90744567 0.9068105 prediction 0.411251903477112 Functional Gain - ZNF331 ENSG00000130844 UTR5 Human protein_coding chr19:54024303 chr19:54024304 . . 0 22 hm5C_associated_SNPs_126895 0 0 1 NCBP2 POSTAR2 ENCODE chr19:54024280-54024490
64251 chr11 118243291 118243291 1 + C T STAD 118243290 + 118243270 118243310 41 AACCTCACTGTGTCCAATACCCGAACAGTTCTTCTCACCCC AACCTCACTGTGTCCAATACCTGAACAGTTCTTCTCACCCC < 41bp 0.627746887203051 0.833355986974452 0.24090841 0.18236053 prediction 0.411218199542802 Functional Gain - UBE4A ENSG00000110344 CDS Human protein_coding chr11:118243290 chr11:118243291 stopgain 0.869 1 22 hm5C_associated_SNPs_126902 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:118243274-118243312
64251 chr15 28900486 28900486 1 + T C rs528722332 28900484 + 28900464 28900504 41 AAGACCGAAAGGGCGAGGGACATGAAATGCCTCGTGGAGAA AAGACCGAAAGGGCGAGGGACACGAAATGCCTCGTGGAGAA < 41bp 0.659431645328421 0.865037992642111 0.3404845 0.25120807 prediction 0.41121269462738 Functional Gain - HERC2P9 ENSG00000206149 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr15:28900484 chr15:28900486 . . 0 23 hm5C_associated_SNPs_126903 0 0 2 ZNF622 POSTAR2 ENCODE chr15:28900452-28900526
64251 chr9 71862958 71862958 1 + C T UCEC 71862957 + 71862937 71862977 41 ATGGATGATGACCCCGAAGACCGCATGTCCTACTTAACCGC ATGGATGATGACCCCGAAGACTGCATGTCCTACTTAACCGC < 41bp 0.438155523857433 0.705605302155755 0.12863326 0.21224052 prediction 0.41121060431151 Functional Gain - TJP2 ENSG00000119139 CDS Human protein_coding chr9:71862957 chr9:71862958 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_126905 0 0 9 BUD13 POSTAR2 ENCODE chr9:71862922-71862976
64251 chr6 43141726 43141726 1 + C A COAD 43141722 + 43141702 43141742 41 GGCAAGGCACTGATTCAGACCTGCCTCAACTCGCCAGACTC GGCAAGGCACTGATTCAGACCTGCATCAACTCGCCAGACTC < 41bp 0.273487855839845 0.705590492018595 0.0647082 0.10574478 prediction 0.411180984037191 Functional Gain - SRF ENSG00000112658 CDS Human protein_coding chr6:43141722 chr6:43141726 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_126911 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:43141686-43141728
64251 chr22 26886156 26886156 1 + T C LUAD 26886154 + 26886134 26886174 41 TTGGGAACAGTTTCAAAGGACTTGAGGAGAGGTAAGTCTGA TTGGGAACAGTTTCAAAGGACTCGAGGAGAGGTAAGTCTGA < 41bp 0.477542664424859 0.70559028006856 0.043960452 0.09696314 prediction 0.411180560137121 Functional Gain - SRRD ENSG00000100104 CDS Human protein_coding chr22:26886154 chr22:26886156 synonymous SNV . 0 23 hm5C_associated_SNPs_126912 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr22:26886116-26886159
64251 chr6 44198152 44198152 1 + C T KIRC 44198151 + 44198131 44198171 41 CTGCCTGCCAGCTACACGGCCCCCATCATGAGTGGCCAGGG CTGCCTGCCAGCTACACGGCCTCCATCATGAGTGGCCAGGG < 41bp 0.423601735954213 0.705584680204157 0.012355775 0.9157652 prediction 0.411169360408315 Functional Gain - SLC29A1 ENSG00000112759 CDS Human protein_coding chr6:44198151 chr6:44198152 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_126914 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:44198126-44198160
64251 chr4 56734528 56734528 1 + A G LUAD 56734525 + 56734505 56734545 41 CTGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGGTGAT CTGTTCCAAGTGGAGAAAATCAGGGTGTGACAGGAGGTGAT < 41bp 0.581787714429909 0.787370753487389 0.89375806 0.92073 prediction 0.411166078114959 Functional Gain - EXOC1 ENSG00000090989 CDS Human protein_coding chr4:56734525 chr4:56734528 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_126916 0 0 3 CSTF2 POSTAR2 GSE40859,GSM1003588 chr4:56734516-56734537
64251 chr5 167850972 167850972 1 + C T rs146672179 167850971 + 167850951 167850991 41 ACTCCTTGGAGTTTGAAGACCCGGAGCTGAGTGCCACTCTT ACTCCTTGGAGTTTGAAGACCTGGAGCTGAGTGCCACTCTT < 41bp 0.623311471406869 0.828888954002419 0.4694249 0.27884105 prediction 0.4111549651911 Functional Gain - WWC1 ENSG00000113645 CDS Human protein_coding chr5:167850971 chr5:167850972 nonsynonymous SNV 0.297 0 22 hm5C_associated_SNPs_126920 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:167850935-167850973
64251 chr14 31169403 31169403 1 + C T UCEC 31169402 + 31169382 31169422 41 TCCCCTATGCAGCAGGAACTCCAGAAGATAAAATGAGGTTG TCCCCTATGCAGCAGGAACTCTAGAAGATAAAATGAGGTTG < 41bp 0.61813360017226 0.82370982833941 0.39220354 0.3261237 prediction 0.411152456334299 Functional Gain - SCFD1 ENSG00000092108 CDS Human protein_coding chr14:31169402 chr14:31169403 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_126922 0 0 10 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr14:31169402-31169403
64251 chrX 118717179 118717179 1 + T A LUAD 118717177 + 118717157 118717197 41 ACAAACGGGAATATGAAAAGCGTGTTTCTGCAATAGTAGAA ACAAACGGGAATATGAAAAGCGAGTTTCTGCAATAGTAGAA < 41bp 0.495907418544326 0.705567629352452 0.3671981 0.35406435 prediction 0.411135258704905 Functional Gain - UBE2A ENSG00000077721 CDS Human protein_coding chrX:118717177 chrX:118717179 synonymous SNV . 0 23 hm5C_associated_SNPs_126929 0 0 17 PTBP1 POSTAR2 GSE42701,GSM1048186 chrX:118717160-118717180
64251 chr12 120118415 120118415 1 + C A rs575683175 120118411 + 120118391 120118431 41 AGAGGATCTGCAGCCCTGGCCCCGCGGTGCATGAGGCTGGG AGAGGATCTGCAGCCCTGGCCCCGAGGTGCATGAGGCTGGG < 41bp 0.309970287989294 0.705562535851453 0.2929297 0.26418787 prediction 0.411125071702906 Functional Gain - PRKAB1 ENSG00000111725 UTR3 Human protein_coding chr12:120118411 chr12:120118415 . . 0 25 hm5C_associated_SNPs_126934 0 0 2 IGF2BP2 POSTAR2 ENCODE chr12:120118363-120118426
64251 chr2 85766282 85766282 1 + C A rs2028106 85766281 + 85766261 85766301 41 TAAATACCGGGCCGCACCGCCCGCTGCTTCGTTCGCTCCGC TAAATACCGGGCCGCACCGCCAGCTGCTTCGTTCGCTCCGC < 41bp 0.484559383968896 0.705561655498141 0.1245859 0.8445463 prediction 0.411123310996282 Functional Gain - MAT2A ENSG00000168906 upstream Human protein_coding chr2:85766281 chr2:85766282 . . 0 22 hm5C_associated_SNPs_126935 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819216 chr2:85766280-85766300
64251 chr17 30685658 30685658 1 + A G COAD 30685655 + 30685635 30685675 41 ACGACTTCTTGAACAGAAAACACAAGGTAAATATTGGGATA ACGACTTCTTGAACAGAAAACACGAGGTAAATATTGGGATA < 41bp 0.522184703936573 0.727746326625169 0.107045114 0.13344908 prediction 0.411123245377191 Functional Gain - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30685655 chr17:30685658 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_126936 0 0 1 TRA2A POSTAR2 ENCODE chr17:30685592-30685661
64251 chr19 19307779 19307779 1 + C G OV 19307776 + 19307756 19307796 41 GTTGTCTGTTTCCCAGCAGGCAGCTCCCTGAAGCACTCCAC GTTGTCTGTTTCCCAGCAGGCAGGTCCCTGAAGCACTCCAC < 41bp 0.506985430010001 0.712544830073621 0.10058892 0.28637034 prediction 0.411118800127241 Functional Gain - RFXANK ENSG00000064490 CDS Human protein_coding chr19:19307776 chr19:19307779 nonsynonymous SNV 0.743 0 24 hm5C_associated_SNPs_126937 0 0 1 YBX3 POSTAR2 ENCODE chr19:19307772-19307856
64251 chr16 19126060 19126060 1 + C T SKCM 19126059 + 19126039 19126079 41 GCCTTCTCCTCGAGACACTTCCGAGAGCCGGGCCTCAGCAT GCCTTCTCCTCGAGACACTTCTGAGAGCCGGGCCTCAGCAT < 41bp 0.538766748099606 0.744312176717646 0.57385194 0.27607337 prediction 0.411090857236082 Functional Gain - ITPRIPL2 ENSG00000205730;ENSG00000261427 CDS Human other chr16:19126059 chr16:19126060 stopgain 0.144 0 22 hm5C_associated_SNPs_126945 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr16:19126050-19126065
64251 chr3 10312075 10312075 1 + C G rs143575255 10312072 + 10312052 10312092 41 CCCTCCACAGGCAGCAGCAGCAACGATGCAGCCCAGGTTGG CCCTCCACAGGCAGCAGCAGCAAGGATGCAGCCCAGGTTGG < 41bp 0.521242033400423 0.726785027548856 0.24286121 0.9042313 prediction 0.411085988296867 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10312072 chr3:10312075 nonsynonymous SNV 0.001 0 24 hm5C_associated_SNPs_126949 0 0 3 EIF3H POSTAR2 ENCODE chr3:10312022-10312078
64251 chr17 57287809 57287809 1 + C T HNSC 57287808 + 57287788 57287828 41 AACCGAACTGAGGCAGGCTCCCAGGACTACAGCCTTCTGCA AACCGAACTGAGGCAGGCTCCTAGGACTACAGCCTTCTGCA < 41bp 0.575254965274223 0.780789095366758 0.8545357 0.82300985 prediction 0.41106826018507 Functional Gain - SMG8 ENSG00000167447 CDS Human protein_coding chr17:57287808 chr17:57287809 stopgain 0.973 0 22 hm5C_associated_SNPs_126950 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:57287788-57287814
64251 chr4 140307369 140307369 1 + T C rs372173050 140307366 + 140307346 140307386 41 ACAACACTTGATGAATCTCTCACTAACAGAAACCTCCAGGT ACAACACTTGATGAATCTCTCACCAACAGAAACCTCCAGGT < 41bp 0.551516814808188 0.757040421564915 0.06552765 0.05150357 prediction 0.411047213513455 Functional Gain - NAA15 ENSG00000164134 CDS Human protein_coding chr4:140307366 chr4:140307369 synonymous SNV . 0 24 hm5C_associated_SNPs_126954 0 0 9 FMR1 POSTAR2 GSE39682,GSM977615 chr4:140307331-140307371
64251 chr1 156169858 156169858 1 + T C LUAD 156169855 + 156169835 156169875 41 GAGCAGATGGTATCACTGGCCTCTACCGAGGGTTCCTGGTC GAGCAGATGGTATCACTGGCCTCCACCGAGGGTTCCTGGTC < 41bp 0.475798825472087 0.705518749098949 0.36788142 0.9394816 prediction 0.411037498197898 Functional Gain - SLC25A44 ENSG00000160785 CDS Human protein_coding chr1:156169855 chr1:156169858 nonsynonymous SNV 0.996 5 24 hm5C_associated_SNPs_126957 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:156169839-156169871
64251 chr16 67203201 67203201 1 + A G LIHC 67203198 + 67203178 67203218 41 GCAGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGC GCAGATGCAGCCCTTGGTTCCAGGGCGGGGTGAGCCTGAGC < 41bp 0.617282061649205 0.82279847294062 0.37171388 0.800405 prediction 0.411032822582829 Functional Gain - HSF4 ENSG00000102878 CDS Human protein_coding chr16:67203198 chr16:67203201 nonsynonymous SNV 0.971 4 24 hm5C_associated_SNPs_126958 0 0 1 PPIG POSTAR2 ENCODE chr16:67203181-67203214
64251 chr1 7895934 7895934 1 + C T SKCM 7895933 + 7895913 7895953 41 AGAAACATTTCCTAATGTCGCCGAAGAGCCCATCTGGAGAA AGAAACATTTCCTAATGTCGCTGAAGAGCCCATCTGGAGAA < 41bp 0.448141493132799 0.705515433184298 0.16827524 0.18370277 prediction 0.411030866368595 Functional Gain - PER3 ENSG00000049246 CDS Human protein_coding chr1:7895933 chr1:7895934 synonymous SNV . 0 22 hm5C_associated_SNPs_126959 0 0 1 IGF2BP1 POSTAR2 ENCODE chr1:7895853-7895956
64251 chrX 84343587 84343587 1 + A G rs140095192 84343584 + 84343564 84343604 41 ATTACAAACGTTTTATTCTTCTCAAGCCTCTTAGAACTGTC ATTACAAACGTTTTATTCTTCTCGAGCCTCTTAGAACTGTC < 41bp 0.47767053618345 0.705511077543477 0.16628292 0.3661732 prediction 0.411022155086955 Functional Gain - APOOL ENSG00000155008 downstream Human protein_coding chrX:84343584 chrX:84343587 . . 0 24 hm5C_associated_SNPs_126961 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:84343548-84343589
64251 chr8 30608942 30608942 1 + C T rs199647078 30608941 + 30608921 30608961 41 GATTTTCTTTTGCTTTGTGGCCGGATTTTGCTACTGCTTGC GATTTTCTTTTGCTTTGTGGCTGGATTTTGCTACTGCTTGC < 41bp 0.538754180695106 0.744264500225286 0.55425465 0.3568377 prediction 0.41102063906036 Functional Gain - UBXN8 ENSG00000104691 ncRNA_exonic Human protein_coding chr8:30608941 chr8:30608942 . 0.981 0 22 hm5C_associated_SNPs_126962 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:30608918-30608966
64251 chr2 25038617 25038617 1 + C T rs149340371 25038616 + 25038596 25038636 41 GGGAGGAAGTACCAGGCAGACCGGCTTCAGGTATCTCTCTG GGGAGGAAGTACCAGGCAGACTGGCTTCAGGTATCTCTCTG < 41bp 0.46331285209624 0.705508436723291 0.32334605 0.15894502 prediction 0.411016873446583 Functional Gain - CENPO ENSG00000138092 CDS Human protein_coding chr2:25038616 chr2:25038617 nonsynonymous SNV 0.942 3 22 hm5C_associated_SNPs_126963 0 0 5 GRWD1 POSTAR2 ENCODE chr2:25038550-25038618
64251 chr12 11992231 11992231 1 + T A OV 11992227 + 11992207 11992247 41 AGAGGACTTTCGCTATCGATCTCCTCATTCAGGTGAGAGTC AGAGGACTTTCGCTATCGATCTCCACATTCAGGTGAGAGTC < 41bp 0.346993675152195 0.7054959820742 0.09149617 0.88465655 prediction 0.4109919641484 Functional Gain - ETV6 ENSG00000139083 CDS Human protein_coding chr12:11992227 chr12:11992231 synonymous SNV . 0 25 hm5C_associated_SNPs_126967 0 0 1 PRPF8 POSTAR2 ENCODE chr12:11992224-11992276
64251 chr7 72413573 72413573 1 + T C rs373441970 72413571 + 72413551 72413591 41 CCCACACCTGCACCTCCGTCCATGATCAAGGTCGTGCCTGC CCCACACCTGCACCTCCGTCCACGATCAAGGTCGTGCCTGC < 41bp 0.440829988089029 0.705489401101515 0.073575765 0.054917693 prediction 0.410978802203031 Functional Gain - POM121 ENSG00000196313 CDS Human protein_coding chr7:72413571 chr7:72413573 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_126970 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:72413571-72413584
64251 chr5 134002605 134002605 1 + C T SKCM 134002604 + 134002584 134002624 41 CCTCCAGCTGGAGGCCCACCCCCAGTGAGGGCCCTCACGCC CCTCCAGCTGGAGGCCCACCCTCAGTGAGGGCCCTCACGCC < 41bp 0.636511826510162 0.841987183836954 0.25497055 0.19734657 prediction 0.410950714653585 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134002604 chr5:134002605 nonsynonymous SNV 0.098 0 22 hm5C_associated_SNPs_126975 0 0 7 IGF2BP1 POSTAR2 ENCODE chr5:134002588-134002637
64251 chr13 53227222 53227222 1 + C T SKCM 53227221 + 53227201 53227241 41 ATGCCCTAATCGACGAGGACCCCCAGGCGGCGTTAGAGGTG ATGCCCTAATCGACGAGGACCTCCAGGCGGCGTTAGAGGTG < 41bp 0.579640446046462 0.785115665046731 0.1632199 0.94761294 prediction 0.410950438000537 Functional Gain - SUGT1 ENSG00000165416 CDS Human protein_coding chr13:53227221 chr13:53227222 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_126976 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr13:53227203-53227227
64251 chr12 31237967 31237967 1 + C G rs140186422 31237966 + 31237946 31237986 41 GGGAGATGCTAGAGACAGGCCCGGAGGCTGAGCGGCTGGAG GGGAGATGCTAGAGACAGGCCGGGAGGCTGAGCGGCTGGAG < 41bp 0.665253187629194 0.870728112274883 0.89111906 0.9075227 prediction 0.410949849291377 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31237966 chr12:31237967 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_126978 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:31237966-31237967
64251 chr2 233655500 233655500 1 + C T BRCA 233655499 + 233655479 233655519 41 AGAGATGATGAACGGGGTTACCGAAGGGTTCGCTCTGGCAG AGAGATGATGAACGGGGTTACTGAAGGGTTCGCTCTGGCAG < 41bp 0.455139206989988 0.70547298789477 0.8371576 0.43825823 prediction 0.41094597578954 Functional Gain - GIGYF2 ENSG00000204120 CDS Human protein_coding chr2:233655499 chr2:233655500 stopgain 1.000 1 22 hm5C_associated_SNPs_126979 0 0 18 HNRNPC POSTAR2 GSE56010,GSM1350199 chr2:233655457-233655509
64251 chr19 2477820 2477820 1 + C A rs7354 2477819 + 2477799 2477839 41 AGGAGCTGGCGGCCGCCGATCCGATGGAGAAGGGGGGACCC AGGAGCTGGCGGCCGCCGATCAGATGGAGAAGGGGGGACCC < 41bp 0.628567448406999 0.83403166498538 0.853008 0.8993745 prediction 0.410928433156761 Functional Gain - GADD45B ENSG00000099860 UTR3 Human protein_coding chr19:2477819 chr19:2477820 . . 0 22 hm5C_associated_SNPs_126981 0 0 2 UPF1 POSTAR2 ENCODE chr19:2477760-2477925
64251 chr22 46685426 46685426 1 + C G rs78692941 46685422 + 46685402 46685442 41 GAGCTGCTCCTGCCCATCCGCTACCGGATCGTCCAGCTCGG GAGCTGCTCCTGCCCATCCGCTACGGGATCGTCCAGCTCGG < 41bp 0.409284500856582 0.705464195772581 0.12062058 0.12471688 prediction 0.410928391545163 Functional Gain - TTC38 ENSG00000075234 CDS Human protein_coding chr22:46685422 chr22:46685426 nonsynonymous SNV 0.995 1 25 hm5C_associated_SNPs_126982 0 0 2 SRSF1 POSTAR2 ENCODE chr22:46685333-46685459
64251 chr3 196304549 196304549 1 + T C UCEC 196304546 + 196304526 196304566 41 CCACAAAACGGGCCCCCATGCAGTGCCAAGGTTATGTGGCA CCACAAAACGGGCCCCCATGCAGCGCCAAGGTTATGTGGCA < 41bp 0.494959670420151 0.70546193845182 0.39008245 0.8317208 prediction 0.410923876903641 Functional Gain - FBXO45 ENSG00000174013 CDS Human protein_coding chr3:196304546 chr3:196304549 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_126984 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:196304520-196304555
64251 chr19 50027789 50027789 1 + C A COAD 50027788 + 50027768 50027808 41 CCCCTCCATGCGCCTGAAGGCCCGACCCAGCAGCCCTGGCT CCCCTCCATGCGCCTGAAGGCACGACCCAGCAGCCCTGGCT < 41bp 0.634793490310158 0.840250584145696 0.10709861 0.11824861 prediction 0.410914187671078 Functional Gain - FCGRT ENSG00000104870 CDS Human protein_coding chr19:50027788 chr19:50027789 synonymous SNV . 0 22 hm5C_associated_SNPs_126989 0 0 3 RBM15 POSTAR2 ENCODE chr19:50027767-50027792
64251 chr16 88781504 88781504 1 + C T SKCM 88781503 + 88781483 88781523 41 ATCCTGGCTGAGGCCCAGCTCCGCACACAGAGGTACTGGGG ATCCTGGCTGAGGCCCAGCTCTGCACACAGAGGTACTGGGG < 41bp 0.601864870579769 0.807314985027937 0.24079886 0.33328313 prediction 0.410900228896335 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781503 chr16:88781504 nonsynonymous SNV 0.889 4 22 hm5C_associated_SNPs_126993 0 0 3 DDX55 POSTAR2 ENCODE chr16:88781436-88781506
64251 chr4 41937516 41937516 1 + C T rs546187136 41937515 + 41937495 41937535 41 AGCCCCCATGGCAGATACGACCCCGAACGGCCCCCAAGGGG AGCCCCCATGGCAGATACGACTCCGAACGGCCCCCAAGGGG < 41bp 0.573784207776571 0.77922289746626 0.087940395 0.58628565 prediction 0.410877379379377 Functional Gain - TMEM33 ENSG00000109133 CDS Human protein_coding chr4:41937515 chr4:41937516 synonymous SNV . 0 22 hm5C_associated_SNPs_126997 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:41937493-41937529
64251 chr12 122614147 122614147 1 + A G OV 122614144 + 122614124 122614164 41 TTTGCCCACAGCTACAGCAGCACAAGGATGAGGACCTCTCC TTTGCCCACAGCTACAGCAGCACGAGGATGAGGACCTCTCC < 41bp 0.607264315130809 0.81269298970828 0.29327756 0.29854953 prediction 0.410857349154943 Functional Gain - MLXIP ENSG00000175727 CDS Human protein_coding chr12:122614144 chr12:122614147 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_127004 0 0 8 BUD13 POSTAR2 ENCODE chr12:122614131-122614183
64251 chr19 50881931 50881931 1 + C A UCEC 50881930 + 50881910 50881950 41 GGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGGCGA GGTGGATCTGAGGCAGGCAGCAAGGGCTCCGGGGAAGGCGA < 41bp 0.642930548808324 0.848335550047422 0.88484097 0.8252435 prediction 0.410810002478196 Functional Gain - NR1H2 ENSG00000131408 CDS Human protein_coding chr19:50881930 chr19:50881931 nonsynonymous SNV 0.577 2 22 hm5C_associated_SNPs_127015 0 0 3 FBL POSTAR2 GSE43666,GSM1067865 chr19:50881923-50881944
64251 chrX 106890893 106890893 1 + C T LUSC 106890892 + 106890872 106890912 41 CTTGACTCATGGAATCTTCTCCGGTCCTGCTATTTCTCGCA CTTGACTCATGGAATCTTCTCTGGTCCTGCTATTTCTCGCA < 41bp 0.460256961057344 0.705401496573916 0.41187915 0.29313183 prediction 0.410802993147832 Functional Gain - PRPS1 ENSG00000147224 CDS Human protein_coding chrX:106890892 chrX:106890893 synonymous SNV . 0 22 hm5C_associated_SNPs_127018 0 0 20 FMR1 POSTAR2 GSE39682,GSM977616 chrX:106890872-106890896
64251 chr11 45832452 45832452 1 + C T SKCM 45832451 + 45832431 45832471 41 ATCTACACCACGAAGGTGCTCCCGGCGGTGGACGGCAGCAT ATCTACACCACGAAGGTGCTCTCGGCGGTGGACGGCAGCAT < 41bp 0.450955564782309 0.705400971821161 0.38550654 0.22121248 prediction 0.410801943642321 Functional Gain - SLC35C1 ENSG00000181830 CDS Human protein_coding chr11:45832451 chr11:45832452 nonsynonymous SNV 0.423 0 22 hm5C_associated_SNPs_127019 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:45832448-45832496
64251 chr12 57908819 57908819 1 + A G KIRC 57908816 + 57908796 57908836 41 AGGTGAATGAGCCCTGGAAGCGGATTAAAGGCAGTGAGGCT AGGTGAATGAGCCCTGGAAGCGGGTTAAAGGCAGTGAGGCT < 41bp 0.605146103146209 0.810546208793191 0.6913889 0.8024753 prediction 0.410800211293965 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57908816 chr12:57908819 nonsynonymous SNV 0.996 1 24 hm5C_associated_SNPs_127022 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:57908755-57908831
64251 chr2 96992564 96992564 1 + C T UCEC 96992563 + 96992543 96992583 41 GTTTGAAGAGAGAAAGCGAGCCGCTGAGCAGAGGCAGAAGG GTTTGAAGAGAGAAAGCGAGCTGCTGAGCAGAGGCAGAAGG < 41bp 0.473793962351594 0.705399151581202 0.89190006 0.2568723 prediction 0.410798303162404 Functional Gain - ITPRIPL1 ENSG00000198885 CDS Human protein_coding chr2:96992563 chr2:96992564 synonymous SNV . 0 22 hm5C_associated_SNPs_127023 0 0 1 EIF3H POSTAR2 ENCODE chr2:96992510-96992565
64251 chr6 54804632 54804632 1 + A G rs139563469 54804629 + 54804609 54804649 41 CTGTGTCCCTAGTTCATTTGCTCAGGAAGAATCAGCAAGGG CTGTGTCCCTAGTTCATTTGCTCGGGAAGAATCAGCAAGGG < 41bp 0.596979558932516 0.802377446386717 0.06424093 0.06549719 prediction 0.410795774908403 Functional Gain - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54804629 chr6:54804632 nonsynonymous SNV 0.974 1 24 hm5C_associated_SNPs_127024 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:54804595-54804633
64251 chr8 19823269 19823269 1 + C T rs191212278 19823268 + 19823248 19823288 41 AGAATACAGAAAATGCTTTTCCGCGGCACGAATCAGACTCA AGAATACAGAAAATGCTTTTCTGCGGCACGAATCAGACTCA < 41bp 0.504940874941432 0.710336530766923 0.24480653 0.15052646 prediction 0.410791311650981 Functional Gain - LPL ENSG00000175445 UTR3 Human protein_coding chr8:19823268 chr8:19823269 . . 0 22 hm5C_associated_SNPs_127026 1 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr8:19823257-19823291
64251 chr7 98254299 98254299 1 + T G KICH 98254296 + 98254276 98254316 41 TCCCACTCCGCACAAACTACCTATACGGCAAGATCAAGAAG TCCCACTCCGCACAAACTACCTAGACGGCAAGATCAAGAAG < 41bp 0.309864737510753 0.70538826292076 0.022009522 0.063571095 prediction 0.41077652584152 Functional Gain - NPTX2 ENSG00000106236 CDS Human protein_coding chr7:98254296 chr7:98254299 nonsynonymous SNV 0.961 4 24 hm5C_associated_SNPs_127028 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr7:98254271-98254302
64251 chrX 153678858 153678858 1 + C T rs782244383 153678857 + 153678837 153678877 41 GTCACCGGGACTCCAGGCACCCGCTCCCCTGCGACCATGCC GTCACCGGGACTCCAGGCACCTGCTCCCCTGCGACCATGCC < 41bp 0.495024028420746 0.705387761925244 0.014735043 0.054603368 prediction 0.410775523850489 Functional Gain - FAM50A ENSG00000071859 UTR3 Human protein_coding chrX:153678857 chrX:153678858 . . 0 22 hm5C_associated_SNPs_127029 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:153678782-153678971
64251 chr17 61681910 61681910 1 + T C UCEC 61681908 + 61681888 61681928 41 TCTCAGAAGGAGGCCCCAACCCTGAGCACAACAGCAACCTG TCTCAGAAGGAGGCCCCAACCCCGAGCACAACAGCAACCTG < 41bp 0.661618050305767 0.86700448325194 0.087206334 0.18280202 prediction 0.410772865892346 Functional Gain - TACO1 ENSG00000136463 CDS Human protein_coding chr17:61681908 chr17:61681910 synonymous SNV . 0 23 hm5C_associated_SNPs_127030 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61681895-61681930
64251 chr1 51435058 51435058 1 + C A rs566197908 51435057 + 51435037 51435077 41 CGCAATGCTGCCGCGAGCTGCCCCAGCAGTCCGGGCTCCGT CGCAATGCTGCCGCGAGCTGCACCAGCAGTCCGGGCTCCGT < 41bp 0.501752728213092 0.707138509614781 0.075877994 0.10205886 prediction 0.410771562803378 Functional Gain - CDKN2C ENSG00000123080 UTR5 Human protein_coding chr1:51435057 chr1:51435058 . . 0 22 hm5C_associated_SNPs_127031 0 0 2 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:51435038-51435069
64251 chr19 44661156 44661156 1 + A G rs61730386 44661153 + 44661133 44661173 41 GGTAAGTGTTTCACTTGTAGCTCAAACCTTCGTATCCATCA GGTAAGTGTTTCACTTGTAGCTCGAACCTTCGTATCCATCA < 41bp 0.601192150595974 0.806576980720166 0.11799222 0.0730536 prediction 0.410769660248383 Functional Gain - ZNF234 ENSG00000263002 CDS Human protein_coding chr19:44661153 chr19:44661156 synonymous SNV . 0 24 hm5C_associated_SNPs_127032 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:44661080-44661156
64251 chr15 45003741 45003741 1 + C G rs545635107 45003740 + 45003720 45003760 41 TGAAGCTGACAGCATTCGGGCCGAGATGTCTCGCTCCGTGG TGAAGCTGACAGCATTCGGGCGGAGATGTCTCGCTCCGTGG < 41bp 0.544621374168695 0.750002258674265 0.38521338 0.9074786 prediction 0.410761769011139 Functional Gain - B2M ENSG00000166710 UTR5 Human protein_coding chr15:45003740 chr15:45003741 . . 0 22 hm5C_associated_SNPs_127033 0 0 35 PTBP1 POSTAR2 GSE42701,GSM1048186 chr15:45003740-45003760
64251 chr2 44933479 44933479 1 + T G PRAD 44933477 + 44933457 44933497 41 ATGACATGCTTGGCTGGGCTCATGGTAGGTCTTTTCTCCAT ATGACATGCTTGGCTGGGCTCAGGGTAGGTCTTTTCTCCAT < 41bp 0.702675710656258 0.908055548576 0.7435707 0.93218535 prediction 0.410759675839485 Functional Gain - CAMKMT ENSG00000143919 CDS Human protein_coding chr2:44933477 chr2:44933479 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_127034 0 0 2 PRPF8 POSTAR2 ENCODE chr2:44933437-44933516
64251 chr6 54805598 54805598 1 + A G UCEC 54805595 + 54805575 54805615 41 CCCATTGCAGTCAGAGGCACCAAAAATGCACACCTTGCAGG CCCATTGCAGTCAGAGGCACCAAGAATGCACACCTTGCAGG < 41bp 0.478264315945146 0.70537487728347 0.48597065 0.51670617 prediction 0.410749754566941 Functional Gain - FAM83B ENSG00000168143 CDS Human protein_coding chr6:54805595 chr6:54805598 nonsynonymous SNV 0.404 1 24 hm5C_associated_SNPs_127037 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:54805595-54805623
64251 chr1 25818071 25818071 1 + C A STAD 25818070 + 25818050 25818090 41 AAAGCGGCAGCTCGAGATTGCCCAAGGTAGGAGAACGTGGG AAAGCGGCAGCTCGAGATTGCACAAGGTAGGAGAACGTGGG < 41bp 0.438840644593004 0.705362413094022 0.375538 0.27416644 prediction 0.410724826188043 Functional Gain - TMEM57 ENSG00000204178 CDS Human protein_coding chr1:25818070 chr1:25818071 synonymous SNV . 0 22 hm5C_associated_SNPs_127039 0 0 1 TRA2A POSTAR2 ENCODE chr1:25818020-25818075
64251 chr20 47852935 47852935 1 + T C UCEC 47852933 + 47852913 47852953 41 ACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCTGGGCGC ACCGGGTGGGGCGAACAGCACGCGCTGGCAGGGCTGGGCGC < 41bp 0.657900496252479 0.86324968018336 0.26445472 0.18916774 prediction 0.410698367861762 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47852933 chr20:47852935 synonymous SNV . 0 23 hm5C_associated_SNPs_127046 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr20:47852935-47852936
64251 chr9 136892305 136892305 1 + C T rs74536212 136892304 + 136892284 136892324 41 CCCCGAACCCCTCAGCACAGCCGCGGTGTGACTGGTGCACA CCCCGAACCCCTCAGCACAGCTGCGGTGTGACTGGTGCACA < 41bp 0.540273954820265 0.745619725647057 0.110966265 0.10160005 prediction 0.410691541653584 Functional Gain - LINC00094 ENSG00000235106 ncRNA_exonic Human protein_coding chr9:136892304 chr9:136892305 . . 0 22 hm5C_associated_SNPs_127048 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr9:136892300-136892340
64251 chr15 76634149 76634149 1 + T C UCEC 76634146 + 76634126 76634166 41 CAGCTCCCGGACACCCCCAACAGTATGGTGCCGAGTCCCGT CAGCTCCCGGACACCCCCAACAGCATGGTGCCGAGTCCCGT < 41bp 0.511307063349852 0.71664173638969 0.31321323 0.33410102 prediction 0.410669346079676 Functional Gain - ISL2 ENSG00000159556 CDS Human protein_coding chr15:76634146 chr15:76634149 synonymous SNV . 0 24 hm5C_associated_SNPs_127050 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:76634149-76634150
64251 chr10 23728990 23728990 1 + C T rs574869227 23728989 + 23728969 23729009 41 CTGAGCGAGCACCGCCAGGCCCTGGCCGCCGCCAAGCACCG CTGAGCGAGCACCGCCAGGCCTTGGCCGCCGCCAAGCACCG < 41bp 0.509323950783417 0.714653389717977 0.08650708 0.08372751 prediction 0.410658877869119 Functional Gain - OTUD1 ENSG00000165312 CDS Human protein_coding chr10:23728989 chr10:23728990 synonymous SNV . 0 22 hm5C_associated_SNPs_127054 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819214 chr10:23728989-23728990
64251 chr6 142519682 142519682 1 + T C LGG 142519679 + 142519659 142519699 41 AGCAACATGCCATCAGGCAACTATACTGGAATACAGATTCC AGCAACATGCCATCAGGCAACTACACTGGAATACAGATTCC < 41bp 0.578596700645277 0.783924478362706 0.18778902 0.53099555 prediction 0.410655555434859 Functional Gain - VTA1 ENSG00000009844 CDS Human protein_coding chr6:142519679 chr6:142519682 synonymous SNV . 0 24 hm5C_associated_SNPs_127055 0 0 15 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:142519593-142519686
64251 chr8 27358495 27358495 1 + C A rs139234214 27358494 + 27358474 27358514 41 GGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGAGAT GGACCAGAGGGTGCCACTACCAGGCTTATGAAAGGAGAGAT < 41bp 0.431998490306204 0.705326531124484 0.3594001 0.88700294 prediction 0.410653062248969 Functional Gain - EPHX2 ENSG00000120915 CDS Human protein_coding chr8:27358494 chr8:27358495 synonymous SNV . 0 22 hm5C_associated_SNPs_127056 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:27358479-27358514
64251 chr11 8009016 8009016 1 + C T STAD 8009015 + 8008995 8009035 41 ACCGGCTGCGGCTCCGGTTCCCGCTGCGGCTCCAGCCTCAT ACCGGCTGCGGCTCCGGTTCCTGCTGCGGCTCCAGCCTCAT < 41bp 0.574926679090116 0.780252939885466 0.12531748 0.27654052 prediction 0.4106525215907 Functional Gain - EIF3F ENSG00000175390 CDS Human protein_coding chr11:8009015 chr11:8009016 synonymous SNV . 0 22 hm5C_associated_SNPs_127057 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:8008991-8009079
64251 chr17 18140983 18140983 1 + T A STAD 18140979 + 18140959 18140999 41 GGTGCAGTGCCTGCCGCCAGCTGCTGTAACCGCTGTCACAC GGTGCAGTGCCTGCCGCCAGCTGCAGTAACCGCTGTCACAC < 41bp 0.708604921940304 0.913927953062512 0.26351494 0.40836805 prediction 0.410646062244415 Functional Gain - LLGL1 ENSG00000131899 CDS Human protein_coding chr17:18140979 chr17:18140983 synonymous SNV . 0 25 hm5C_associated_SNPs_127060 0 0 4 FMR1 POSTAR2 GSE39682,GSM977616 chr17:18140965-18140990
64251 chrX 16846272 16846272 1 + C A LUSC 16846268 + 16846248 16846288 41 TGAAGATCCTGCAGAAGAAGCAAGCCCAGATTGTGAAAGAG TGAAGATCCTGCAGAAGAAGCAAGACCAGATTGTGAAAGAG < 41bp 0.294428296263999 0.705322344594762 0.22555375 0.3278479 prediction 0.410644689189525 Functional Gain - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16846268 chrX:16846272 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_127061 0 0 19 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16846227-16846312
64251 chr5 37064848 37064848 1 + C T LUAD 37064847 + 37064827 37064867 41 GAGGCTAAGCGCCGTGATGGCCGCAAACTGGTGCCTTGGGT GAGGCTAAGCGCCGTGATGGCTGCAAACTGGTGCCTTGGGT < 41bp 0.575141943079812 0.780460096228699 0.37447983 0.33777255 prediction 0.410636306297775 Functional Gain - NIPBL ENSG00000164190 CDS Human protein_coding chr5:37064847 chr5:37064848 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_127064 0 0 3 CPSF6 POSTAR2 GSE37401,GSM917664 chr5:37064839-37064853
64251 chr5 109025624 109025624 1 + T G rs556230091 109025622 + 109025602 109025642 41 AGGGCTTGGCTCCTCGCGATCTTGTTCCTTTCCCCTCCGCT AGGGCTTGGCTCCTCGCGATCTGGTTCCTTTCCCCTCCGCT < 41bp 0.376025360048096 0.705309760251931 0.3857082 0.79976344 prediction 0.410619520503861 Functional Gain - MAN2A1 ENSG00000112893 UTR5 Human protein_coding chr5:109025622 chr5:109025624 . . 0 23 hm5C_associated_SNPs_127066 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chr5:109025620-109025640
64251 chr2 62363011 62363011 1 + C A LUSC 62363010 + 62362990 62363030 41 TTTGATGAGGTCAAAGTCAACCAAATTCTGAAGACGCTGTC TTTGATGAGGTCAAAGTCAACAAAATTCTGAAGACGCTGTC < 41bp 0.456026688874664 0.70530834190492 0.295781 0.25950867 prediction 0.41061668380984 Functional Gain - COMMD1 ENSG00000173163 CDS Human protein_coding chr2:62363010 chr2:62363011 nonsynonymous SNV 0.980 0 22 hm5C_associated_SNPs_127067 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:62363010-62363030
64251 chr1 110882384 110882384 1 + C T CESC 110882383 + 110882363 110882403 41 TGATACCGGTGGGGGCAGCTCCAGTAGCCGCTTGCATAGTT TGATACCGGTGGGGGCAGCTCTAGTAGCCGCTTGCATAGTT < 41bp 0.480355624513953 0.705301949403789 0.41346496 0.582865 prediction 0.410603898807578 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882383 chr1:110882384 synonymous SNV . 0 22 hm5C_associated_SNPs_127070 0 0 9 SRRM4 POSTAR2 GSE57278,GSM1378374 chr1:110882360-110882400
64251 chr21 34787276 34787276 1 + T C UCEC 34787273 + 34787253 34787293 41 GCAGGTCCTGAGTTGGGAGCCAGTGGCCCTGAGCAATAGCA GCAGGTCCTGAGTTGGGAGCCAGCGGCCCTGAGCAATAGCA < 41bp 0.507635594782591 0.712927398459603 0.44680572 0.87702847 prediction 0.410583607354024 Functional Gain - IFNGR2 ENSG00000159128 CDS Human protein_coding chr21:34787273 chr21:34787276 nonsynonymous SNV 0.001 1 24 hm5C_associated_SNPs_127072 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917664 chr21:34787235-34787285
64251 chr6 143784105 143784105 1 + C T UCEC 143784104 + 143784084 143784124 41 CTTAATGCAGCAACTGAATTCCGAGAGCCTCACAGCTCTGC CTTAATGCAGCAACTGAATTCTGAGAGCCTCACAGCTCTGC < 41bp 0.451921821781835 0.705287443777905 0.35054767 0.19852763 prediction 0.410574887555811 Functional Gain - PEX3 ENSG00000034693 CDS Human protein_coding chr6:143784104 chr6:143784105 synonymous SNV . 0 22 hm5C_associated_SNPs_127077 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:143784083-143784106
64251 chr17 26724898 26724898 1 - T C rs2239909 26724901 - 26724881 26724921 41 ACTAGGAGTCACCTGGCCAGCACAGCCAAGAGTGGGGCTGG ACTAGGAGTCACCTGGCCAGCACGGCCAAGAGTGGGGCTGG < 41bp 0.583098712053756 0.78838556596527 0.17926043 0.17392036 prediction 0.410573707823028 Functional Gain - SARM1;SLC46A1 ENSG00000004139;ENSG00000076351 UTR3 Human other chr17:26724901 chr17:26724898 . . 0 24 hm5C_associated_SNPs_127078 1 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr17:26724894-26724920
64251 chr1 40928730 40928730 1 + C T COAD 40928729 + 40928709 40928749 41 TCAACATGTTAGAATTCATACCGGGGAAAAGCCCTATGAAT TCAACATGTTAGAATTCATACTGGGGAAAAGCCCTATGAAT < 41bp 0.582391566502423 0.787677751962056 0.44633842 0.1412684 prediction 0.410572370919267 Functional Gain - ZFP69B ENSG00000187801 CDS Human protein_coding chr1:40928729 chr1:40928730 synonymous SNV . 0 22 hm5C_associated_SNPs_127079 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:40928702-40928732
64251 chr2 27293076 27293076 1 + C A COAD 27293075 + 27293055 27293095 41 GCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTTGTCCCT GCAGGGGTCCCTTGGGCCAACATGAGGTTTGTTTTGTCCCT < 41bp 0.444827734567278 0.705285533093811 0.57266134 0.6177198 prediction 0.410571066187622 Functional Gain - AGBL5 ENSG00000084693 CDS Human protein_coding chr2:27293075 chr2:27293076 nonsynonymous SNV 0.941 0 22 hm5C_associated_SNPs_127080 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:27293053-27293084
64251 chr11 61505676 61505676 1 + C T SKCM 61505675 + 61505655 61505695 41 CCTGCAGCGAAGCACCAAGCCCAAAGTGAGCCCCCACCTGG CCTGCAGCGAAGCACCAAGCCTAAAGTGAGCCCCCACCTGG < 41bp 0.442776532073852 0.705280693180201 0.14921916 0.18610054 prediction 0.410561386360403 Functional Gain - DAGLA ENSG00000134780 CDS Human protein_coding chr11:61505675 chr11:61505676 synonymous SNV . 0 22 hm5C_associated_SNPs_127082 0 0 1 PPIG POSTAR2 ENCODE chr11:61505606-61505688
64251 chr4 38870090 38870090 1 + C G rs574741037 38870089 + 38870069 38870109 41 CACCGCCTCCACTCGCAGCCCCCGGGATGGGTCCCACTCCC CACCGCCTCCACTCGCAGCCCGCGGGATGGGTCCCACTCCC < 41bp 0.653787266205721 0.859065854293481 0.7467251 0.9214082 prediction 0.410557176175521 Functional Gain - FAM114A1 ENSG00000197712 UTR5 Human protein_coding chr4:38870089 chr4:38870090 . . 0 22 hm5C_associated_SNPs_127085 0 0 4 DGCR8 POSTAR2 ENCODE chr4:38870083-38870176
64251 chr1 40961578 40961578 1 + T C LUSC 40961575 + 40961555 40961595 41 TGCAACCGCTGTGGAAAAGCCTATAGGCATGATTCATCCTT TGCAACCGCTGTGGAAAAGCCTACAGGCATGATTCATCCTT < 41bp 0.4808412738499 0.705274813036965 0.13885346 0.25136876 prediction 0.41054962607393 Functional Gain - ZFP69 ENSG00000187815 CDS Human protein_coding chr1:40961575 chr1:40961578 synonymous SNV . 0 24 hm5C_associated_SNPs_127086 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:40961560-40961598
64251 chr7 127239585 127239585 1 + C T SARC 127239584 + 127239564 127239604 41 TTCATCTACTACCCTGCCGACCGGGTATCTACCACTTCCAG TTCATCTACTACCCTGCCGACTGGGTATCTACCACTTCCAG < 41bp 0.45436460693957 0.705273591174652 0.67707026 0.2542899 prediction 0.410547182349304 Functional Gain - FSCN3 ENSG00000106328 CDS Human protein_coding chr7:127239584 chr7:127239585 nonsynonymous SNV 0.720 1 22 hm5C_associated_SNPs_127087 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:127239561-127239586
64251 chr7 100771699 100771699 1 + T G UCEC 100771695 + 100771675 100771715 41 ATGCAGATGTCTCCAGCCCTCACCTGCCTAGTCCTGGGCCT ATGCAGATGTCTCCAGCCCTCACCGGCCTAGTCCTGGGCCT < 41bp 0.496218627146468 0.705272232324986 0.09346616 0.18620422 prediction 0.410544464649973 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100771695 chr7:100771699 nonsynonymous SNV 0.029 4 25 hm5C_associated_SNPs_127088 0 0 7 BUD13 POSTAR2 ENCODE chr7:100771635-100771754
64251 chr19 10870427 10870427 1 + C T SKCM 10870426 + 10870406 10870446 41 CCTCACAGGGACTTCCTTCCCCGCGGTTCAGGAATCGTCAC CCTCACAGGGACTTCCTTCCCTGCGGTTCAGGAATCGTCAC < 41bp 0.559820211642891 0.765089090972107 0.53986806 0.120886385 prediction 0.410537758658431 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10870426 chr19:10870427 nonsynonymous SNV 0.904 5 22 hm5C_associated_SNPs_127091 0 0 4 DDX24 POSTAR2 ENCODE chr19:10870413-10870456
64251 chr2 241569449 241569449 1 + T C rs150808237 241569447 + 241569427 241569467 41 AAGCTGGGCTTCTACGCCTACTTGGGCGTCCTGCTGGTGCT AAGCTGGGCTTCTACGCCTACTCGGGCGTCCTGCTGGTGCT < 41bp 0.642884852798909 0.848148713631479 0.6289491 0.402723 prediction 0.41052772166514 Functional Gain - GPR35 ENSG00000178623 CDS Human protein_coding chr2:241569447 chr2:241569449 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_127093 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:241569426-241569455
64251 chr10 12123550 12123550 1 + C T rs138526346 12123549 + 12123529 12123569 41 CAAAATCAACCCCCTCTTCACCGGACAAGCCCTGCTGGAGA CAAAATCAACCCCCTCTTCACTGGACAAGCCCTGCTGGAGA < 41bp 0.635351886770339 0.840614599569605 0.40271306 0.3878783 prediction 0.410525425598532 Functional Gain - DHTKD1 ENSG00000181192 CDS Human protein_coding chr10:12123549 chr10:12123550 synonymous SNV . 0 22 hm5C_associated_SNPs_127095 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr10:12123531-12123552
64251 chr19 44612188 44612188 1 + A G READ 44612185 + 44612165 44612205 41 CACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAA CACAGCAGAGAAACACCTCTCAAGTGTGAGCAGCATGGGAA < 41bp 0.46236706202134 0.705258569110417 0.21258247 0.44452196 prediction 0.410517138220833 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44612185 chr19:44612188 synonymous SNV . 0 24 hm5C_associated_SNPs_127096 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44612178-44612209
64251 chr19 1251849 1251849 1 + A G COAD 1251846 + 1251826 1251866 41 CTCTCTTTGTAGTCTCAGGCCTCAAGGCCGGAACAGTCCGT CTCTCTTTGTAGTCTCAGGCCTCGAGGCCGGAACAGTCCGT < 41bp 0.612300559801205 0.817550085669766 0.069573194 0.30274898 prediction 0.410499051737121 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1251846 chr19:1251849 synonymous SNV . 0 24 hm5C_associated_SNPs_127103 0 0 8 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:1251840-1251872
64251 chr1 36767168 36767168 1 + A G LUAD 36767165 + 36767145 36767185 41 TTGCAATAGCAGTTTCGAGCCAGAGGAAGAGGCTGGGGCAG TTGCAATAGCAGTTTCGAGCCAGGGGAAGAGGCTGGGGCAG < 41bp 0.606127343064977 0.811375415653019 0.9101895 0.90876174 prediction 0.410496145176084 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36767165 chr1:36767168 synonymous SNV . 0 24 hm5C_associated_SNPs_127105 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:36767157-36767185
64251 chr21 47552153 47552153 1 + A G UCEC 47552150 + 47552130 47552170 41 ACAATACCTGAACTCCTTCTCGCACGTGGGCGCAGGCGTGG ACAATACCTGAACTCCTTCTCGCGCGTGGGCGCAGGCGTGG < 41bp 0.608488799019222 0.813735092396857 0.2637241 0.45959234 prediction 0.410492586755271 Functional Gain - COL6A2 ENSG00000142173 CDS Human protein_coding chr21:47552150 chr21:47552153 nonsynonymous SNV 0.994 1 24 hm5C_associated_SNPs_127106 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr21:47552132-47552162
64251 chr10 60556180 60556180 1 + T C LUSC 60556177 + 60556157 60556197 41 TGTCTCCTCGGACTTGAAAGCAGTGGGGTTACCATAGCAAC TGTCTCCTCGGACTTGAAAGCAGCGGGGTTACCATAGCAAC < 41bp 0.51900411761721 0.724250397759584 0.33914036 0.40069437 prediction 0.410492560284749 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60556177 chr10:60556180 synonymous SNV . 0 24 hm5C_associated_SNPs_127107 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:60556167-60556193
64251 chr22 38364823 38364823 1 + C G rs3026643 38364819 + 38364799 38364839 41 AGGGCCTCCAGGCCTAGGTGCAGCCTGGCCCTGGGATGGGA AGGGCCTCCAGGCCTAGGTGCAGCGTGGCCCTGGGATGGGA < 41bp 0.423480018161803 0.705246112442649 0.24542153 0.7125589 prediction 0.410492224885298 Functional Gain - POLR2F ENSG00000100142 UTR3 Human protein_coding chr22:38364819 chr22:38364823 . . 0 25 hm5C_associated_SNPs_127108 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr22:38364818-38364851
64251 chr19 19162577 19162577 1 + T C rs146836816 19162574 + 19162554 19162594 41 GGGGCCTACCCCATCATCTTCACTGCCTGGAAGCTGGCCAC GGGGCCTACCCCATCATCTTCACCGCCTGGAAGCTGGCCAC < 41bp 0.490249507309446 0.705228117715051 0.4230104 0.19752964 prediction 0.410456235430102 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19162574 chr19:19162577 synonymous SNV . 0 24 hm5C_associated_SNPs_127114 0 0 13 METTL3 POSTAR2 GSE46705,GSM1135007 chr19:19162557-19162577
64251 chr15 85432036 85432036 1 + C A rs141245994 85432035 + 85432015 85432055 41 CTCCCTAGGAGTGACTTGAGCCCCGCAGAGATCAGGAGCAG CTCCCTAGGAGTGACTTGAGCACCGCAGAGATCAGGAGCAG < 41bp 0.450125361246384 0.705209147246725 0.09278539 0.12007862 prediction 0.41041829449345 Functional Gain - SLC28A1 ENSG00000156222 CDS Human protein_coding chr15:85432035 chr15:85432036 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_127122 0 0 3 BUD13 POSTAR2 ENCODE chr15:85432023-85432080
64251 chr6 49437927 49437927 1 + A G UCEC 49437924 + 49437904 49437944 41 AAATGCTTCCAAGAAAAACGCTCAACAGTTAAAAAGAAATC AAATGCTTCCAAGAAAAACGCTCGACAGTTAAAAAGAAATC < 41bp 0.555759771414095 0.760951222626901 0.025112718 0.067970276 prediction 0.410382902425611 Functional Gain - CENPQ ENSG00000031691 CDS Human protein_coding chr6:49437924 chr6:49437927 nonsynonymous SNV 0.018 1 24 hm5C_associated_SNPs_127128 0 0 1 PUM2 POSTAR2 ENCODE chr6:49437886-49437941
64251 chr22 28397319 28397319 1 + C A BRCA 28397318 + 28397298 28397338 41 GATAGACGGTGCCTCGTGACCCGAAAACAAGCCCCCGGCCC GATAGACGGTGCCTCGTGACCAGAAAACAAGCCCCCGGCCC < 41bp 0.624311086061366 0.829497284818538 0.53828245 0.45389637 prediction 0.410372397514344 Functional Gain - TTC28-AS1 ENSG00000235954 ncRNA_exonic Human processed_transcript chr22:28397318 chr22:28397319 . . 0 22 hm5C_associated_SNPs_127129 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:28397280-28397320
64251 chr4 48343926 48343926 1 + C G rs541736876 48343925 + 48343905 48343945 41 TTCGGGCCGGCGCGTCCATTCCCTCCTCCGGCGCGGCGTCT TTCGGGCCGGCGCGTCCATTCGCTCCTCCGGCGCGGCGTCT < 41bp 0.394668085264157 0.705180230600608 0.6006011 0.7434956 prediction 0.410360461201216 Functional Gain - SLAIN2 ENSG00000109171 CDS Human protein_coding chr4:48343925 chr4:48343926 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_127130 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:48343918-48343953
64251 chr13 113965104 113965104 1 + C A BRCA 113965103 + 113965083 113965123 41 TGTGTTAGTGGCACCCAGGTCCACATGAACAACGTGACCGT TGTGTTAGTGGCACCCAGGTCAACATGAACAACGTGACCGT < 41bp 0.444112085448474 0.705173575993617 0.09012607 0.09608969 prediction 0.410347151987235 Functional Gain - LAMP1 ENSG00000185896 CDS Human protein_coding chr13:113965103 chr13:113965104 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_127131 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:113965081-113965119
64251 chr12 122481906 122481906 1 + A G UCEC 122481903 + 122481883 122481923 41 GGCTGTGCCCAGCGACGGCACCGAGGCCAAGGTGGATGAGG GGCTGTGCCCAGCGACGGCACCGGGGCCAAGGTGGATGAGG < 41bp 0.44115893039317 0.705161108301057 0.18228287 0.70654297 prediction 0.410322216602113 Functional Gain - BCL7A ENSG00000110987 CDS Human protein_coding chr12:122481903 chr12:122481906 nonsynonymous SNV 0.393 1 24 hm5C_associated_SNPs_127136 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:122481900-122481920
64251 chr7 77325800 77325800 1 + C T OV 77325799 + 77325779 77325819 41 AGCGCAAAATGGCGGAACCGCCGAGCCCCGTGCACTGTGTC AGCGCAAAATGGCGGAACCGCTGAGCCCCGTGCACTGTGTC < 41bp 0.496743432714547 0.705145362605662 0.7506267 0.35367864 prediction 0.410290725211323 Functional Gain - RSBN1L ENSG00000187257 CDS Human protein_coding chr7:77325799 chr7:77325800 nonsynonymous SNV 0.972 0 22 hm5C_associated_SNPs_127144 0 0 1 CPSF1 POSTAR2 GSE37401,GSM917672 chr7:77325800-77325833
64251 chr3 185316806 185316806 1 + A G LGG 185316803 + 185316783 185316823 41 CTGGATCCTGGAACAACATGCTGAAACTGGGTGAGGTGGTC CTGGATCCTGGAACAACATGCTGGAACTGGGTGAGGTGGTC < 41bp 0.474415398850133 0.705140481249261 0.31240106 0.4002705 prediction 0.410280962498522 Functional Gain - SENP2 ENSG00000163904 CDS Human protein_coding chr3:185316803 chr3:185316806 stoploss 1.000 0 24 hm5C_associated_SNPs_127145 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:185316764-185316809
64251 chr19 39962086 39962086 1 + A G LUSC 39962083 + 39962063 39962103 41 CGCTTTGCTGTGGCCTTGGACTCAGAGCAGAACAACATCCA CGCTTTGCTGTGGCCTTGGACTCGGAGCAGAACAACATCCA < 41bp 0.473890119300695 0.705129835789414 0.06578413 0.20606622 prediction 0.410259671578828 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39962083 chr19:39962086 synonymous SNV . 0 24 hm5C_associated_SNPs_127148 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:39962005-39962114
64251 chr2 47249054 47249054 1 + C T SKCM 47249053 + 47249033 47249073 41 GATCAGCCTCGGAGAGGAAGCCGGGGAGTTCCTCCCCAAGG GATCAGCCTCGGAGAGGAAGCTGGGGAGTTCCTCCCCAAGG < 41bp 0.602376699533183 0.807498431467868 0.9411663 0.9234251 prediction 0.410243463869369 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47249053 chr2:47249054 synonymous SNV . 0 22 hm5C_associated_SNPs_127152 0 0 1 PPIG POSTAR2 ENCODE chr2:47249006-47249093
64251 chr5 64859177 64859177 1 + A G UCEC 64859174 + 64859154 64859194 41 GTAGCGATTTTCAGCAGAGACGTAGAAGGCGCCGGGACCCG GTAGCGATTTTCAGCAGAGACGTGGAAGGCGCCGGGACCCG < 41bp 0.553099646792208 0.758217897511396 0.31226707 0.36646873 prediction 0.410236501438375 Functional Gain - PPWD1 ENSG00000113593 CDS Human protein_coding chr5:64859174 chr5:64859177 nonsynonymous SNV 0.259 1 24 hm5C_associated_SNPs_127153 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350200 chr5:64859134-64859189
64251 chr5 68471312 68471312 1 + T A UCEC 68471308 + 68471288 68471328 41 TGGTGCACTTTCCTCCTTCTCAAATTGCAGCAGGAGCTTTT TGGTGCACTTTCCTCCTTCTCAAAATGCAGCAGGAGCTTTT < 41bp 0.369752614868656 0.705117462921757 0.19502822 0.29297695 prediction 0.410234925843513 Functional Gain - CCNB1 ENSG00000134057 CDS Human protein_coding chr5:68471308 chr5:68471312 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_127154 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:68471225-68471377
64251 chr1 40751637 40751637 1 + T C UCEC 40751634 + 40751614 40751654 41 TAAAAATGAGGAGGTACTCGCTGTACTAGGCCATGAACTGG TAAAAATGAGGAGGTACTCGCTGCACTAGGCCATGAACTGG < 41bp 0.577537610203467 0.782646949652562 0.63657355 0.5701188 prediction 0.410218678898192 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40751634 chr1:40751637 nonsynonymous SNV 0.993 3 24 hm5C_associated_SNPs_127157 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:40751606-40751642
64251 chr2 32289200 32289200 1 + C T UCEC 32289199 + 32289179 32289219 41 CGGGGCCGCGCCAGCACCTGCCTCGGCCTCGGCCCCGGCGC CGGGGCCGCGCCAGCACCTGCTTCGGCCTCGGCCCCGGCGC < 41bp 0.553508657582887 0.758609037503561 0.28023958 0.28429917 prediction 0.410200759841349 Functional Gain - SPAST ENSG00000021574 CDS Human protein_coding chr2:32289199 chr2:32289200 synonymous SNV . 0 22 hm5C_associated_SNPs_127161 0 0 1 DDX3X POSTAR2 ENCODE chr2:32289137-32289237
64251 chr2 54045647 54045647 1 + A G rs59813403 54045644 + 54045624 54045664 41 CTGGGCACATGGTAGAGGCTCACATGGGAGTTGTCCTCACC CTGGGCACATGGTAGAGGCTCACGTGGGAGTTGTCCTCACC < 41bp 0.475996537790824 0.705092540921829 0.033408284 0.1502749 prediction 0.410185081843658 Functional Gain - ERLEC1 ENSG00000068912 UTR3 Human protein_coding chr2:54045644 chr2:54045647 . . 0 24 hm5C_associated_SNPs_127165 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:54045592-54045668
64251 chr1 1431520 1431520 1 + C A rs138449199 1431516 + 1431496 1431536 41 GTCTGAGGCCGCCCTGTCAGCTGGCCGGTCCAAGCCTGTGG GTCTGAGGCCGCCCTGTCAGCTGGACGGTCCAAGCCTGTGG < 41bp 0.705609741793409 0.910690187678324 0.5137528 0.70377994 prediction 0.410160891769829 Functional Gain - ATAD3B ENSG00000160072 UTR3 Human protein_coding chr1:1431516 chr1:1431520 . . 0 25 hm5C_associated_SNPs_127171 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:1431495-1431554
64251 chr5 172359522 172359522 1 + T C HNSC 172359519 + 172359499 172359539 41 GCAAGCAGCGGTACTCCTACCAGTACACGGTGGCCAACAAG GCAAGCAGCGGTACTCCTACCAGCACACGGTGGCCAACAAG < 41bp 0.504359145977058 0.709434211354827 0.6207284 0.5363233 prediction 0.410150130755539 Functional Gain - ERGIC1 ENSG00000113719 CDS Human protein_coding chr5:172359519 chr5:172359522 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127173 0 0 1 IGF2BP2 POSTAR2 ENCODE chr5:172359438-172359540
64251 chr17 41165209 41165209 1 + A G BLCA 41165206 + 41165186 41165226 41 TCTGATCACCTTTGATGACCCCAAAGGTAAGCTCATGGGGA TCTGATCACCTTTGATGACCCCAGAGGTAAGCTCATGGGGA < 41bp 0.45044919009158 0.705071568205843 0.093006134 0.41253108 prediction 0.410143136411687 Functional Gain - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41165206 chr17:41165209 nonsynonymous SNV 0.986 0 24 hm5C_associated_SNPs_127175 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:41165203-41165282
64251 chr15 91184414 91184414 1 + C T rs200743244 91184413 + 91184393 91184433 41 ATTCCAACTGCGGGAGTCTCCCGAACACCATCCTGCCAGGT ATTCCAACTGCGGGAGTCTCCTGAACACCATCCTGCCAGGT < 41bp 0.441517982956764 0.705067230009607 0.32806957 0.22068712 prediction 0.410134460019214 Functional Gain - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91184413 chr15:91184414 nonsynonymous SNV 0.006 4 22 hm5C_associated_SNPs_127177 0 0 1 YBX3 POSTAR2 ENCODE chr15:91184359-91184433
64251 chr22 31583164 31583164 1 + C G GBM 31583160 + 31583140 31583180 41 CAGTGGGAGCAGCAATGGCGCTGGCGAGAGCGGAGGGCAGG CAGTGGGAGCAGCAATGGCGCTGGGGAGAGCGGAGGGCAGG < 41bp 0.671495390297359 0.876562583919117 0.39923033 0.4169876 prediction 0.410134387243517 Functional Gain - RNF185 ENSG00000138942 CDS Human protein_coding chr22:31583160 chr22:31583164 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_127178 0 0 1 GRWD1 POSTAR2 ENCODE chr22:31583029-31583249
64251 chr15 34517776 34517776 1 + C G LGG 34517772 + 34517752 34517792 41 GGGCAGTGGCCAGGGAGACTCGCTCTACCCAGTCGGTTACT GGGCAGTGGCCAGGGAGACTCGCTGTACCCAGTCGGTTACT < 41bp 0.662387140690974 0.867453616584904 0.71641695 0.325751 prediction 0.41013295178786 Functional Gain - EMC4 ENSG00000128463 CDS Human protein_coding chr15:34517772 chr15:34517776 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_127179 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:34517771-34517820
64251 chr16 27765498 27765498 1 + C T COAD 27765497 + 27765477 27765517 41 CTCCAACCCATGTGCAGATCCCGGAGCTAGAGCTCCCATCC CTCCAACCCATGTGCAGATCCTGGAGCTAGAGCTCCCATCC < 41bp 0.611648569075632 0.816711946487491 0.909585 0.39733657 prediction 0.410126754823719 Functional Gain - KIAA0556 ENSG00000047578 CDS Human protein_coding chr16:27765497 chr16:27765498 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_127180 0 0 1 BUD13 POSTAR2 ENCODE chr16:27765484-27765534
64251 chr19 34887238 34887238 1 + C T HNSC 34887237 + 34887217 34887257 41 GTCCAATGGGAAATACATCACCAAATCTGGAACCCGTGTGG GTCCAATGGGAAATACATCACTAAATCTGGAACCCGTGTGG < 41bp 0.439304432319904 0.705055093453236 0.06483644 0.1844784 prediction 0.410110186906473 Functional Gain - GPI ENSG00000105220;ENSG00000266953 CDS Human other chr19:34887237 chr19:34887238 synonymous SNV . 0 22 hm5C_associated_SNPs_127184 0 0 21 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr19:34887209-34887258
64251 chr15 78833036 78833036 1 + C A rs57064725 78833035 + 78833015 78833055 41 CCTCCTCTGTGACGGACCGACCGCCGGGAATGGCCCCCGCC CCTCCTCTGTGACGGACCGACAGCCGGGAATGGCCCCCGCC < 41bp 0.600499484981158 0.805548115501594 0.21129277 0.13168716 prediction 0.410097261040872 Functional Gain - PSMA4 ENSG00000041357 intronic Human protein_coding chr15:78833035 chr15:78833036 . . 0 22 hm5C_associated_SNPs_127187 0 1 1 EFTUD2 POSTAR2 ENCODE chr15:78833036-78833070
64251 chr19 18305824 18305824 1 + C A rs2271881 18305823 + 18305803 18305843 41 GAACTTCCTCTTCGTGCCCCCCCAATTTCGAGTCACCTACA GAACTTCCTCTTCGTGCCCCCACAATTTCGAGTCACCTACA < 41bp 0.439593124864154 0.705047421236167 0.066526055 0.08037642 prediction 0.410094842472334 Functional Gain - MPV17L2 ENSG00000254858 CDS Human protein_coding chr19:18305823 chr19:18305824 synonymous SNV . 0 22 hm5C_associated_SNPs_127189 0 0 1 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:18305820-18305840
64251 chr2 10267260 10267260 1 + C T UCEC 10267259 + 10267239 10267279 41 AGTGGAAGGCATTTTCTTTTCCGGTTCTTTTGCGTCGATAT AGTGGAAGGCATTTTCTTTTCTGGTTCTTTTGCGTCGATAT < 41bp 0.616729277754292 0.821771354889349 0.491332 0.28087497 prediction 0.410084154270113 Functional Gain - RRM2 ENSG00000171848 CDS Human protein_coding chr2:10267259 chr2:10267260 synonymous SNV . 0 22 hm5C_associated_SNPs_127194 0 0 27 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:10267212-10267263
64251 chr1 86047684 86047684 1 + T C STAD 86047681 + 86047661 86047701 41 GGGGAAAGTTTCCAGCCCAACTGTAAACATCAGTGCACATG GGGGAAAGTTTCCAGCCCAACTGCAAACATCAGTGCACATG < 41bp 0.555783615717735 0.760824865263559 0.14176461 0.2494916 prediction 0.410082499091647 Functional Gain - CYR61 ENSG00000142871 CDS Human protein_coding chr1:86047681 chr1:86047684 synonymous SNV . 0 24 hm5C_associated_SNPs_127195 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:86047683-86047684
64251 chr11 61159969 61159969 1 + T C rs183785901 61159967 + 61159947 61159987 41 GGACATCCGAGCGAGGGCCACTTGCGGCCAGGCCCGAGCTC GGACATCCGAGCGAGGGCCACTCGCGGCCAGGCCCGAGCTC < 41bp 0.519667205890749 0.72470813883333 0.3436392 0.36394364 prediction 0.410081865885162 Functional Gain - TMEM216 ENSG00000187049 UTR5 Human protein_coding chr11:61159967 chr11:61159969 . . 0 23 hm5C_associated_SNPs_127196 2 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:61159948-61159970
64251 chr3 10321606 10321606 1 + A G rs565157993 10321603 + 10321583 10321623 41 CTTTCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCTCCT CTTTCTTGGGGAAGAGGACCCCAGAGGAGGTACTTCCTCCT < 41bp 0.582128972457504 0.787165388908107 0.89025784 0.9207194 prediction 0.410072832901207 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 UTR3 Human other chr3:10321603 chr3:10321606 . . 0 24 hm5C_associated_SNPs_127199 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:10321597-10321633
64251 chr1 114515735 114515735 1 + C T SKCM 114515734 + 114515714 114515754 41 GGCGTTTGTGGCCCCTCTCTCCCAAGCCCCCTACACCTTCC GGCGTTTGTGGCCCCTCTCTCTCAAGCCCCCTACACCTTCC < 41bp 0.634541839638923 0.839577926289806 0.36171186 0.513664 prediction 0.410072173301766 Functional Gain - HIPK1 ENSG00000163349 CDS Human protein_coding chr1:114515734 chr1:114515735 synonymous SNV . 0 22 hm5C_associated_SNPs_127200 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:114515717-114515739
64251 chr17 30687743 30687743 1 + C A KIRP 30687742 + 30687722 30687762 41 ATATTCCTCCAATGGCACAGCCAGGACTGCCACCAGTACCA ATATTCCTCCAATGGCACAGCAAGGACTGCCACCAGTACCA < 41bp 0.44634821981322 0.705025833374175 0.11995268 0.17574564 prediction 0.410051666748349 Functional Gain - ZNF207 ENSG00000010244 CDS Human protein_coding chr17:30687742 chr17:30687743 nonsynonymous SNV 0.990 1 22 hm5C_associated_SNPs_127203 0 0 24 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:30687620-30687756
64251 chr17 46628481 46628481 1 + C T UCEC 46628480 + 46628460 46628500 41 CTCCCCCGCCGCCGCCGCCACCGCCCCCGCTGCCACCACTG CTCCCCCGCCGCCGCCGCCACTGCCCCCGCTGCCACCACTG < 41bp 0.521051568537538 0.726076512880217 0.36474404 0.37287074 prediction 0.410049888685357 Functional Gain - HOXB3 ENSG00000120093 CDS Human protein_coding chr17:46628480 chr17:46628481 nonsynonymous SNV 0.086 1 22 hm5C_associated_SNPs_127204 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:46628424-46628550
64251 chr7 94293026 94293026 1 + A G GBM 94293023 + 94293003 94293043 41 AGAGCAAGTGGAACCCACCCCTGAGGATGAGGATGATGACA AGAGCAAGTGGAACCCACCCCTGGGGATGAGGATGATGACA < 41bp 0.62469073645939 0.829713632821902 0.056031734 0.20507658 prediction 0.410045792725022 Functional Gain - PEG10 ENSG00000242265 CDS Human protein_coding chr7:94293023 chr7:94293026 nonsynonymous SNV 0.081 0 24 hm5C_associated_SNPs_127205 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr7:94292972-94293039
64251 chr20 43538769 43538769 1 + C G rs532517682 43538766 + 43538746 43538786 41 GGCTCCTGCTTGCCCCGCAGCCCCGGCCCCCTGCCCACCAT GGCTCCTGCTTGCCCCGCAGCCCGGGCCCCCTGCCCACCAT < 41bp 0.502439364339768 0.707455618934732 0.37387425 0.56398845 prediction 0.410032509189928 Functional Gain - PABPC1L ENSG00000101104 UTR5 Human protein_coding chr20:43538766 chr20:43538769 . . 0 24 hm5C_associated_SNPs_127206 0 0 2 GRWD1 POSTAR2 ENCODE chr20:43538760-43538778
64251 chr17 40717718 40717718 1 + C T COAD 40717717 + 40717697 40717737 41 GAGGGATGGCCTCAGTGAAGCCGCGGCTCAAAGCCGGCTGC GAGGGATGGCCTCAGTGAAGCTGCGGCTCAAAGCCGGCTGC < 41bp 0.616546223067518 0.821561161015122 0.57479346 0.3869228 prediction 0.410029875895209 Functional Gain - COASY ENSG00000068120 CDS Human protein_coding chr17:40717717 chr17:40717718 synonymous SNV . 0 22 hm5C_associated_SNPs_127209 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:40717709-40717739
64251 chr19 11475316 11475316 1 + C T BRCA 11475315 + 11475295 11475335 41 CTCTATCCCTCCCCCTTCCACCGGGACAACTTCAGCCCTTA CTCTATCCCTCCCCCTTCCACTGGGACAACTTCAGCCCTTA < 41bp 0.611028505293318 0.816040493480045 0.9091157 0.79497266 prediction 0.410023976373454 Functional Gain - PLPPR2 ENSG00000105520 CDS Human protein_coding chr19:11475315 chr19:11475316 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_127211 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:11475288-11475338
64251 chr1 9781822 9781822 1 + C T UCEC 9781821 + 9781801 9781841 41 CCTCCCTTCACCTTCCAGCTCCGAGATGCACGTGCCGTCGG CCTCCCTTCACCTTCCAGCTCTGAGATGCACGTGCCGTCGG < 41bp 0.458603283944529 0.705011600778246 0.3858092 0.26294863 prediction 0.410023201556492 Functional Gain - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9781821 chr1:9781822 synonymous SNV . 0 22 hm5C_associated_SNPs_127212 0 0 5 PPIG POSTAR2 ENCODE chr1:9781774-9781862
64251 chr18 51807123 51807123 1 + T C rs3218788 51807120 + 51807100 51807140 41 TGCGGGAAGCCATGTATAATCAGTTGGGGCTCACTGGCTGT TGCGGGAAGCCATGTATAATCAGCTGGGGCTCACTGGCTGT < 41bp 0.547261398070716 0.752266330299413 0.4619712 0.868618 prediction 0.410009864457393 Functional Gain - POLI ENSG00000101751 CDS Human protein_coding chr18:51807120 chr18:51807123 synonymous SNV . 0 24 hm5C_associated_SNPs_127214 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714640 chr18:51807117-51807152
64251 chr16 2815642 2815642 1 + C A ACC 2815641 + 2815621 2815661 41 ACAAGGAAGGCCAGACTGTCCCGTAGAAGCCGCTCTGCCTC ACAAGGAAGGCCAGACTGTCCAGTAGAAGCCGCTCTGCCTC < 41bp 0.438499050600078 0.705002753190839 0.341133 0.53368306 prediction 0.410005506381678 Functional Gain - SRRM2 ENSG00000167978 CDS Human protein_coding chr16:2815641 chr16:2815642 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_127217 0 0 32 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:2815640-2815660
64251 chr16 29675721 29675721 1 + T C LUAD 29675718 + 29675698 29675738 41 GGGGCCAGTGGACCCCAGGTCTCTAGCGTAAAACTATCTAC GGGGCCAGTGGACCCCAGGTCTCCAGCGTAAAACTATCTAC < 41bp 0.569031797155985 0.774025866533591 0.32549936 0.95387053 prediction 0.40998813875521 Functional Gain - SPN ENSG00000197471 CDS Human protein_coding chr16:29675718 chr16:29675721 synonymous SNV . 0 24 hm5C_associated_SNPs_127222 0 0 3 SND1 POSTAR2 ENCODE chr16:29675668-29675723
64251 chr14 65511158 65511158 1 + C G HNSC 65511154 + 65511134 65511174 41 CTGCTCCACCGCGCACTGCACGCCCAAGGTGAGCCTGGGGA CTGCTCCACCGCGCACTGCACGCCGAAGGTGAGCCTGGGGA < 41bp 0.414347291187074 0.704983813169883 0.04569143 0.30753398 prediction 0.409967626339766 Functional Gain - CHURC1-FNTB;FNTB ENSG00000125954;ENSG00000257365 CDS Human other chr14:65511154 chr14:65511158 nonsynonymous SNV 0.967 1 25 hm5C_associated_SNPs_127227 0 0 1 EFTUD2 POSTAR2 ENCODE chr14:65511157-65511202
64251 chrX 140993229 140993229 1 + T G rs150896199 140993225 + 140993205 140993245 41 TATGCCTACTGCTGGGATGCCGAGTCTTCTCCAGAGTTCCT TATGCCTACTGCTGGGATGCCGAGGCTTCTCCAGAGTTCCT < 41bp 0.539551157502792 0.744527886494469 0.056466073 0.43251035 prediction 0.409953457983353 Functional Gain - MAGEC1 ENSG00000155495 CDS Human protein_coding chrX:140993225 chrX:140993229 nonsynonymous SNV 0.027 1 25 hm5C_associated_SNPs_127232 0 0 1 RPS3 POSTAR2 ENCODE chrX:140993206-140993239
64251 chr6 2785256 2785256 1 + T C STAD 2785253 + 2785233 2785273 41 ATTGGTAGGTGCTTCTGGCCCAGTGTGTGGTCTACTTTGCC ATTGGTAGGTGCTTCTGGCCCAGCGTGTGGTCTACTTTGCC < 41bp 0.518038059485351 0.723012208195065 0.5596974 0.38022155 prediction 0.409948297419428 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2785253 chr6:2785256 nonsynonymous SNV 0.999 4 24 hm5C_associated_SNPs_127235 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:2785233-2785266
64251 chr15 41576236 41576236 1 + C A rs111627022 41576235 + 41576215 41576255 41 AGATGGCGGAGTAAGGCGTGCCGCTGCAAACTGGCCTCTGG AGATGGCGGAGTAAGGCGTGCAGCTGCAAACTGGCCTCTGG < 41bp 0.608529625638775 0.81349104972384 0.43539977 0.6031281 prediction 0.409922848170131 Functional Gain - OIP5-AS1 ENSG00000247556 ncRNA_exonic Human processed_transcript chr15:41576235 chr15:41576236 . . 0 22 hm5C_associated_SNPs_127238 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:41576227-41576254
64251 chr1 156756499 156756499 1 + C T UCEC 156756498 + 156756478 156756518 41 CTCCTGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTC CTCCTGCCCCATGCCTTCTCCTGCAAACCCTCGGATGGCTC < 41bp 0.434085625606075 0.704953877073864 0.12721294 0.24214718 prediction 0.409907754147728 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156756498 chr1:156756499 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_127244 0 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:156756420-156756520
64251 chr17 45018321 45018321 1 + C A rs565638240 45018317 + 45018297 45018337 41 CTTGGCCTAACAGTGTGACTCTCTCCACCGCCTCAGTGTAG CTTGGCCTAACAGTGTGACTCTCTACACCGCCTCAGTGTAG < 41bp 0.335080404210346 0.704941428143764 0.86305875 0.8607922 prediction 0.409882856287528 Functional Gain - GOSR2 ENSG00000108433;ENSG00000262633 intronic Human other chr17:45018317 chr17:45018321 . . 0 25 hm5C_associated_SNPs_127248 1 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:45018188-45018329
64251 chr12 663010 663010 1 + C T rs150169248 663009 + 662989 663029 41 TGGGACCAGACCTTCAGTGCCCGGAATCTCGACTTCCAAGC TGGGACCAGACCTTCAGTGCCTGGAATCTCGACTTCCAAGC < 41bp 0.632833118855783 0.837772947199977 0.672368 0.6499807 prediction 0.409879656688389 Functional Gain - B4GALNT3 ENSG00000139044 CDS Human protein_coding chr12:663009 chr12:663010 nonsynonymous SNV 0.008 2 22 hm5C_associated_SNPs_127250 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:662983-663015
64251 chr16 20926917 20926917 1 + C T STAD 20926916 + 20926896 20926936 41 CAAGAAGTCCTTGGCCTCTACCGCAGCATTTTCAGGCTTGC CAAGAAGTCCTTGGCCTCTACTGCAGCATTTTCAGGCTTGC < 41bp 0.637056292860032 0.841994340367265 0.4693749 0.37318316 prediction 0.409876095014466 Functional Gain - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20926916 chr16:20926917 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_127252 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:20926901-20926939
64251 chr12 125510146 125510146 1 + A G rs73419937 125510143 + 125510123 125510163 41 GGCAGCTCTTAGGACACATTCCCAGAAGAGCGGAAAGATCA GGCAGCTCTTAGGACACATTCCCGGAAGAGCGGAAAGATCA < 41bp 0.480186872444451 0.704936959321672 0.01643321 0.033833474 prediction 0.409873918643344 Functional Gain - THRIL ENSG00000184992 UTR3 Human protein_coding chr12:125510143 chr12:125510146 . . 0 24 hm5C_associated_SNPs_127255 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:125510089-125510178
64251 chr10 60546785 60546785 1 + T A SKCM 60546781 + 60546761 60546801 41 AAAAAAGTGATGGAAGAAACCGGATGCCATATCCACTTTCC AAAAAAGTGATGGAAGAAACCGGAAGCCATATCCACTTTCC < 41bp 0.382809637543239 0.704927380302242 0.64756423 0.4870998 prediction 0.409854760604484 Functional Gain - BICC1 ENSG00000122870 CDS Human protein_coding chr10:60546781 chr10:60546785 nonsynonymous SNV 0.933 3 25 hm5C_associated_SNPs_127260 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr10:60546757-60546789
64251 chr4 122728757 122728757 1 + T C UCS 122728754 + 122728734 122728774 41 CACCACATGCCCATTTGTGTCAGTTTTGCCTTTTTCCAGCA CACCACATGCCCATTTGTGTCAGCTTTGCCTTTTTCCAGCA < 41bp 0.527910766048178 0.732838126026687 0.12751758 0.33307308 prediction 0.409854719957016 Functional Gain - EXOSC9 ENSG00000123737 CDS Human protein_coding chr4:122728754 chr4:122728757 synonymous SNV . 0 24 hm5C_associated_SNPs_127261 0 0 1 RTCB POSTAR2 GSE38201,GSM936508 chr4:122728736-122728757
64251 chr2 173368882 173368882 1 + C T DLBC 173368881 + 173368861 173368901 41 CGATACCATGCTGTAAGGATCCGGAAAGAAGAGCGAGAGAT CGATACCATGCTGTAAGGATCTGGAAAGAAGAGCGAGAGAT < 41bp 0.60624672230715 0.811165498306236 0.24481347 0.22371435 prediction 0.409837551998172 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173368881 chr2:173368882 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_127266 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:173368874-173368889
64251 chr12 102590434 102590434 1 + A G UCEC 102590431 + 102590411 102590451 41 TGATGTGGACCAACAGGTATCAGACTTGCCAACAAGGTCGG TGATGTGGACCAACAGGTATCAGGCTTGCCAACAAGGTCGG < 41bp 0.482086422550061 0.704910717890314 0.46186987 0.8475293 prediction 0.409821435780629 Functional Gain - PMCH ENSG00000183395 CDS Human protein_coding chr12:102590431 chr12:102590434 nonsynonymous SNV 0.998 1 24 hm5C_associated_SNPs_127268 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:102590397-102590441
64251 chrX 47088144 47088144 1 + C A COAD 47088143 + 47088123 47088163 41 CCCACAGGCAGGCCAGCTTTCCGCGTGGTGGACACCGAGTT CCCACAGGCAGGCCAGCTTTCAGCGTGGTGGACACCGAGTT < 41bp 0.633898243892634 0.838805956107321 0.9043097 0.9119295 prediction 0.409815424429374 Functional Gain - CDK16 ENSG00000102225 CDS Human protein_coding chrX:47088143 chrX:47088144 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_127270 0 0 14 ELAVL1 POSTAR2 GSE28865,GSM714640 chrX:47088127-47088159
64251 chr16 89160329 89160329 1 + C G rs145228567 89160328 + 89160308 89160348 41 GGCCGGAACCCGGCCCGACCCCGGCGCGCGCGCGGCGGAGG GGCCGGAACCCGGCCCGACCCGGGCGCGCGCGCGGCGGAGG < 41bp 0.676817163338676 0.88172403098545 0.74361044 0.90322614 prediction 0.409813735293549 Functional Gain - ACSF3 ENSG00000176715 UTR5 Human protein_coding chr16:89160328 chr16:89160329 . . 0 22 hm5C_associated_SNPs_127271 0 0 1 DDX3X POSTAR2 ENCODE chr16:89160275-89160347
64251 chr11 376346 376346 1 + C T UCEC 376345 + 376325 376365 41 GAGCCTTCCTCTTCCTCAACCCGGACGGTGAGTGTCCGCAG GAGCCTTCCTCTTCCTCAACCTGGACGGTGAGTGTCCGCAG < 41bp 0.615449201090877 0.820354437100793 0.10436711 0.1416724 prediction 0.409810472019832 Functional Gain - B4GALNT4 ENSG00000182272 CDS Human protein_coding chr11:376345 chr11:376346 nonsynonymous SNV 0.881 0 22 hm5C_associated_SNPs_127272 0 0 5 GRWD1 POSTAR2 ENCODE chr11:376338-376351
64251 chr1 181058617 181058617 1 + C G rs548699165 181058616 + 181058596 181058636 41 GGGTACACCGGCCGCGACCCCCCGCGCTGCCTGCTGCTGCG GGGTACACCGGCCGCGACCCCGCGCGCTGCCTGCTGCTGCG < 41bp 0.673548612168697 0.878453185770674 0.3142581 0.8658507 prediction 0.409809147203953 Functional Gain - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058616 chr1:181058617 synonymous SNV . 0 22 hm5C_associated_SNPs_127273 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:181058606-181058633
64251 chr10 85902493 85902493 1 + T C BRCA 85902490 + 85902470 85902510 41 AGAGGCAGCATTGGAACCATCGATGGAAAAAATATTTAAAA AGAGGCAGCATTGGAACCATCGACGGAAAAAATATTTAAAA < 41bp 0.549140112359074 0.75404286722976 0.10046509 0.41523582 prediction 0.409805509741372 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85902490 chr10:85902493 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_127275 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:85902425-85902495
64251 chr17 34964184 34964184 1 + C T SKCM 34964183 + 34964163 34964203 41 GATCCCCAGTCCTCCGAGATCCCCATCATGAGTTGCTTGGA GATCCCCAGTCCTCCGAGATCTCCATCATGAGTTGCTTGGA < 41bp 0.657933612314832 0.862828116400727 0.037178338 0.9368838 prediction 0.409789008171789 Functional Gain - MRM1 ENSG00000129282 CDS Human other chr17:34964183 chr17:34964184 nonsynonymous SNV 0.017 1 22 hm5C_associated_SNPs_127278 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:34964176-34964197
64251 chr11 61916295 61916295 1 + C A UCEC 61916294 + 61916274 61916314 41 GCAGCAGGGGCCAGCAAGGCCCTGAATGTGACTGTGGACGT GCAGCAGGGGCCAGCAAGGCCATGAATGTGACTGTGGACGT < 41bp 0.439568199211784 0.704893643293704 0.10394877 0.28996295 prediction 0.409787286587408 Functional Gain - INCENP ENSG00000149503 CDS Human protein_coding chr11:61916294 chr11:61916295 nonsynonymous SNV 0.003 3 22 hm5C_associated_SNPs_127280 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:61916289-61916318
64251 chr19 50155936 50155936 1 + C T UCEC 50155935 + 50155915 50155955 41 GCCTCCTCCTCCTCCTCTTCCCGGGAGAAGGGGTCTCGTCG GCCTCCTCCTCCTCCTCTTCCTGGGAGAAGGGGTCTCGTCG < 41bp 0.573964389400614 0.778854452204063 0.94197416 0.90079546 prediction 0.4097801256069 Functional Gain - SCAF1 ENSG00000126461 CDS Human protein_coding chr19:50155935 chr19:50155936 nonsynonymous SNV 0.364 3 22 hm5C_associated_SNPs_127282 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50155904-50156014
64251 chr12 110600761 110600761 1 + A G UCEC 110600758 + 110600738 110600778 41 CCGTAAAAAAGAAGCCAAAGCTGAGGAACTTCAGGAGGCCA CCGTAAAAAAGAAGCCAAAGCTGGGGAACTTCAGGAGGCCA < 41bp 0.601875189930311 0.806756270169761 0.1988782 0.52704394 prediction 0.4097621604789 Functional Gain - IFT81 ENSG00000122970 CDS Human protein_coding chr12:110600758 chr12:110600761 nonsynonymous SNV 0.998 4 24 hm5C_associated_SNPs_127285 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:110600758-110600777
64251 chr12 42853383 42853383 1 - G A rs576421272 42853384 - 42853364 42853404 41 ACGTGACATCTCGTGCCTGTCCGGTGCGGGTGCGTTACAGA ACGTGACATCTCGTGCCTGTCTGGTGCGGGTGCGTTACAGA < 41bp 0.483192117510657 0.704879890945645 0.11097407 0.25121164 prediction 0.409759781891289 Functional Gain - PRICKLE1 ENSG00000257225 ncRNA_exonic Human antisense chr12:42853384 chr12:42853383 . . 0 22 hm5C_associated_SNPs_127286 0 0 1 FXR2 POSTAR2 GSE39682,GSM977620 chr12:42853381-42853399
64251 chr11 308242 308242 1 + C T LUAD 308241 + 308221 308261 41 CTGTCAACAGCGGCCAGCCTCCCAACTACGAGATGCTCAAG CTGTCAACAGCGGCCAGCCTCTCAACTACGAGATGCTCAAG < 41bp 0.614291339952137 0.819170713610479 0.28243202 0.3138534 prediction 0.409758747316685 Functional Gain - IFITM2 ENSG00000185201 CDS Human protein_coding chr11:308241 chr11:308242 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_127287 0 0 9 LIN28A POSTAR2 GSE39873,GSM980594 chr11:308240-308260
64251 chr16 1412514 1412514 1 + C T COAD 1412513 + 1412493 1412533 41 CCAGGTAGAGCAGGACCTGGCCGATGAGCTGATCACCCCCC CCAGGTAGAGCAGGACCTGGCTGATGAGCTGATCACCCCCC < 41bp 0.601500508446312 0.806376538118415 0.76240313 0.5057023 prediction 0.409752059344207 Functional Gain - GNPTG ENSG00000090581 CDS Human protein_coding chr16:1412513 chr16:1412514 synonymous SNV . 0 22 hm5C_associated_SNPs_127289 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:1412485-1412523
64251 chr20 25188027 25188027 1 + C T SKCM 25188026 + 25188006 25188046 41 GTCTTCCAGTTCACCCGGCCCCCCAGAGGTACCCGCCTCTC GTCTTCCAGTTCACCCGGCCCTCCAGAGGTACCCGCCTCTC < 41bp 0.626813700553363 0.831685728364245 0.2902835 0.94832796 prediction 0.409744055621764 Functional Gain - ENTPD6 ENSG00000197586 CDS Human protein_coding chr20:25188026 chr20:25188027 nonsynonymous SNV 0.086 0 22 hm5C_associated_SNPs_127291 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:25188003-25188041
64251 chr1 203276285 203276285 1 + C G LUAD 203276284 + 203276264 203276304 41 CCGTCCAAGGGCTCCGGCTACCGCTGCATTCGCATCAACCA CCGTCCAAGGGCTCCGGCTACGGCTGCATTCGCATCAACCA < 41bp 0.383882934007691 0.704870931119437 0.068253726 0.16891828 prediction 0.409741862238874 Functional Gain - BTG2 ENSG00000159388 CDS Human protein_coding chr1:203276284 chr1:203276285 nonsynonymous SNV 0.988 4 22 hm5C_associated_SNPs_127292 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:203276270-203276292
64251 chr18 29797785 29797785 1 + C T rs200254969 29797784 + 29797764 29797804 41 TGTGAAAAGAGAGGCTCCACCCGAGACACCATAGTCATTGC TGTGAAAAGAGAGGCTCCACCTGAGACACCATAGTCATTGC < 41bp 0.613157086921637 0.818020928238397 0.19420952 0.07656777 prediction 0.409727682633521 Functional Gain - MEP1B ENSG00000141434 CDS Human protein_coding chr18:29797784 chr18:29797785 stopgain 0.344 0 22 hm5C_associated_SNPs_127294 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:29797751-29797788
64251 chr17 34923614 34923614 1 + A G UCEC 34923611 + 34923591 34923631 41 TAGAAACATATCTGCGAAAACACAGGTAAGTCTGATGGTTG TAGAAACATATCTGCGAAAACACGGGTAAGTCTGATGGTTG < 41bp 0.57108183810666 0.775931755554278 0.31299436 0.5702533 prediction 0.409699834895237 Functional Gain - GGNBP2 ENSG00000005955 CDS Human other chr17:34923611 chr17:34923614 nonsynonymous SNV 0.998 3 24 hm5C_associated_SNPs_127301 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:34923573-34923627
64251 chr8 22262246 22262246 1 + C A rs34328787 22262242 + 22262222 22262262 41 CCATGAAGCTGCTGCTGCTGCACCCGGCCTTCCAGAGCTGC CCATGAAGCTGCTGCTGCTGCACCAGGCCTTCCAGAGCTGC < 41bp 0.283716937645615 0.70484422019957 0.08626419 0.08290064 prediction 0.40968844039914 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22262242 chr8:22262246 nonsynonymous SNV 0.484 1 25 hm5C_associated_SNPs_127303 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:22262209-22262247
64251 chr2 176973652 176973652 1 + C T UCEC 176973651 + 176973631 176973671 41 GCAGTTGCCCCCCAGCGGTCCCGGAAAAAGCGCTGTCCCTA GCAGTTGCCCCCCAGCGGTCCTGGAAAAAGCGCTGTCCCTA < 41bp 0.58935008807967 0.794188966849823 0.55989677 0.38134187 prediction 0.409677757540307 Functional Gain - HOXD11 ENSG00000128713 CDS Human protein_coding chr2:176973651 chr2:176973652 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_127306 0 0 4 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:176973620-176973720
64251 chr20 30155916 30155916 1 + C T UCEC 30155915 + 30155895 30155935 41 CGGAAATCCTGCCTCATACCCCGAGGCTCACCCACTTCCCC CGGAAATCCTGCCTCATACCCTGAGGCTCACCCACTTCCCC < 41bp 0.522274450926109 0.727113003835921 0.92180383 0.69611806 prediction 0.409677105819624 Functional Gain - HM13 ENSG00000101294 CDS Human protein_coding chr20:30155915 chr20:30155916 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_127307 0 0 5 PTBP1 POSTAR2 GSE57278,GSM1486177 chr20:30155900-30155920
64251 chr6 170632273 170632273 1 + C G COAD 170632269 + 170632249 170632289 41 CCCTAGAAGATGAGCTTGACCAGGCCTTACCCAGCCAGGCC CCCTAGAAGATGAGCTTGACCAGGGCTTACCCAGCCAGGCC < 41bp 0.678664912432813 0.883495421407299 0.61263627 0.84023297 prediction 0.409661017948972 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170632269 chr6:170632273 nonsynonymous SNV 0.986 2 25 hm5C_associated_SNPs_127311 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:170632252-170632282
64251 chr18 33800116 33800116 1 + C T UCS 33800115 + 33800095 33800135 41 CCTGAGTCAGAAGCAGGAACCCCGGCTCTGCCTGATCCAGC CCTGAGTCAGAAGCAGGAACCTCGGCTCTGCCTGATCCAGC < 41bp 0.435621991424205 0.704826455677978 0.1780627 0.44012737 prediction 0.409652911355955 Functional Gain - MOCOS ENSG00000075643 CDS Human protein_coding chr18:33800115 chr18:33800116 synonymous SNV . 0 22 hm5C_associated_SNPs_127312 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr18:33800082-33800139
64251 chr19 10941028 10941028 1 + C G BLCA 10941027 + 10941007 10941047 41 ATCTCGGCCAGTTCGGATCCCCCCAGGGATTCCCCCAGGAG ATCTCGGCCAGTTCGGATCCCGCCAGGGATTCCCCCAGGAG < 41bp 0.394129465282533 0.704822238600344 0.21007231 0.45882788 prediction 0.409644477200689 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10941027 chr19:10941028 synonymous SNV . 0 22 hm5C_associated_SNPs_127316 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:10941017-10941039
64251 chr7 76256733 76256733 1 + C G rs549230099 76256730 + 76256710 76256750 41 TGGAAAATGCTGCCTGCCTTCAACGCCTGTTTCTGACTCTT TGGAAAATGCTGCCTGCCTTCAAGGCCTGTTTCTGACTCTT < 41bp 0.513492174104837 0.718312223715983 0.22267827 0.7013553 prediction 0.409640099222293 Functional Gain - LOC100133091 ENSG00000205485 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:76256730 chr7:76256733 . . 0 24 hm5C_associated_SNPs_127319 0 0 1 CSTF2 POSTAR2 GSE40859,GSM1003589 chr7:76256731-76256752
64251 chr1 193038360 193038360 1 + A G rs182431335 193038357 + 193038337 193038377 41 GAAGTTGGGCCTTGAAAATGCTGAAGCTTTAATTAGATTGA GAAGTTGGGCCTTGAAAATGCTGGAGCTTTAATTAGATTGA < 41bp 0.577512009690115 0.782327380593504 0.26542926 0.36583954 prediction 0.40963074180678 Functional Gain - TROVE2 ENSG00000116747 CDS Human protein_coding chr1:193038357 chr1:193038360 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_127321 0 0 14 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:193038324-193038366
64251 chr1 224377312 224377312 1 + C A UCEC 224377311 + 224377291 224377331 41 AGATAAAGTCCTTGATGAAACCTGATCCCAATTTGATATGG AGATAAAGTCCTTGATGAAACATGATCCCAATTTGATATGG < 41bp 0.454715429546404 0.704807889746861 0.10792637 0.10385665 prediction 0.409615779493722 Functional Gain - DEGS1 ENSG00000143753 CDS Human protein_coding chr1:224377311 chr1:224377312 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_127327 0 0 23 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:224377280-224377320
64251 chr22 50279060 50279060 1 + C T SKCM 50279059 + 50279039 50279079 41 GTCGTGTGCTTGCACTGTGGCCGGACCATCAGCCGGGGGAA GTCGTGTGCTTGCACTGTGGCTGGACCATCAGCCGGGGGAA < 41bp 0.59419600636778 0.799001934876352 0.5134819 0.37232095 prediction 0.409611857017144 Functional Gain - ZBED4 ENSG00000100426 CDS Human protein_coding chr22:50279059 chr22:50279060 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_127329 0 0 13 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr22:50279000-50279060
64251 chr20 371972 371972 1 + T C rs6051637 371969 + 371949 371989 41 GCCCTGGCCGTGCTGGAGCCCTATGCGCGGCTGCCCCCGCA GCCCTGGCCGTGCTGGAGCCCTACGCGCGGCTGCCCCCGCA < 41bp 0.539119650291218 0.743925011936785 0.20745373 0.108430654 prediction 0.409610723291134 Functional Gain - TRIB3 ENSG00000101255 CDS Human protein_coding chr20:371969 chr20:371972 synonymous SNV . 0 24 hm5C_associated_SNPs_127330 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:371949-371980
64251 chr19 10225258 10225258 1 + C T COAD 10225257 + 10225237 10225277 41 CCACCCTCTACTCTACATGGCCGCAGTGCCCAGCCTGGGCT CCACCCTCTACTCTACATGGCTGCAGTGCCCAGCCTGGGCT < 41bp 0.589183672567118 0.793987782121585 0.36215246 0.35154313 prediction 0.409608219108933 Functional Gain - P2RY11;PPAN-P2RY11 ENSG00000130810;ENSG00000243207;ENSG00000244165 CDS Human other chr19:10225257 chr19:10225258 synonymous SNV . 0 22 hm5C_associated_SNPs_127331 0 0 11 CPSF6 POSTAR2 GSE37401,GSM917665 chr19:10225186-10225268
64251 chr4 140375253 140375253 1 + C A rs551015649 140375249 + 140375229 140375269 41 GTGGCTCCTGGGAAGTTGCGCAGCCGAACTGGCCGGCTGGG GTGGCTCCTGGGAAGTTGCGCAGCAGAACTGGCCGGCTGGG < 41bp 0.675890366983402 0.88068864514895 0.89825225 0.8909855 prediction 0.409596556331095 Functional Gain - RAB33B ENSG00000172007 UTR5 Human protein_coding chr4:140375249 chr4:140375253 . . 0 25 hm5C_associated_SNPs_127335 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr4:140375240-140375259
64251 chr17 6939483 6939483 1 + C A rs188212524 6939482 + 6939462 6939502 41 ACGCCCCCGGGAGACTCTGGCCCGGCCAGCGCGGGCCAGGT ACGCCCCCGGGAGACTCTGGCACGGCCAGCGCGGGCCAGGT < 41bp 0.467764195591439 0.704796222954804 0.45411074 0.7623246 prediction 0.409592445909607 Functional Gain - SLC16A13 ENSG00000174327 UTR5 Human protein_coding chr17:6939482 chr17:6939483 . . 0 22 hm5C_associated_SNPs_127336 0 0 1 DDX3X POSTAR2 ENCODE chr17:6939438-6939486
64251 chr19 1026622 1026622 1 + C G rs528317691 1026621 + 1026601 1026641 41 CCCGGCGGTCCCGTCCCGTCCCGTCCTGTGCGGCCCCGTCC CCCGGCGGTCCCGTCCCGTCCGGTCCTGTGCGGCCCCGTCC < 41bp 0.47779906978029 0.704790201056198 0.092589825 0.75512695 prediction 0.409580402112396 Functional Gain - CNN2 ENSG00000064666 UTR5 Human protein_coding chr19:1026621 chr19:1026622 . . 0 22 hm5C_associated_SNPs_127339 0 0 3 DDX3X POSTAR2 ENCODE chr19:1026617-1026675
64251 chr19 17322899 17322899 1 + C A rs55732173 17322898 + 17322878 17322918 41 CCCACCTGCCTCGCTGGGCACCGGGTGCCCGGGAGGCGGCT CCCACCTGCCTCGCTGGGCACAGGGTGCCCGGGAGGCGGCT < 41bp 0.633035489328689 0.837819552341282 0.8849201 0.90283644 prediction 0.409568126025186 Functional Gain - MYO9B ENSG00000099331 CDS Human protein_coding chr19:17322898 chr19:17322899 nonsynonymous SNV 0.004 1 22 hm5C_associated_SNPs_127342 0 0 2 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr19:17322895-17322919
64251 chr14 97313614 97313614 1 + C T SARC 97313613 + 97313593 97313633 41 GTTCAGAAATGGATTCGTACCCGTAAGCTGAAGTACCTGGG GTTCAGAAATGGATTCGTACCTGTAAGCTGAAGTACCTGGG < 41bp 0.44878229827322 0.704769777570833 0.29106262 0.32367027 prediction 0.409539555141667 Functional Gain - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97313613 chr14:97313614 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_127347 0 0 3 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:97313594-97313616
64251 chr1 9416450 9416450 1 + C T SKCM 9416449 + 9416429 9416469 41 CATACCCAGCCTTTCTGGAACCAGATGAGACATTCATTGTC CATACCCAGCCTTTCTGGAACTAGATGAGACATTCATTGTC < 41bp 0.44747193218793 0.704769240458965 0.92997324 0.71641636 prediction 0.40953848091793 Functional Gain - SPSB1 ENSG00000171621 CDS Human protein_coding chr1:9416449 chr1:9416450 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_127348 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:9416423-9416483
64251 chr1 118484427 118484427 1 + A G LUAD 118484424 + 118484404 118484444 41 TCCTTTCCAAAAAGGAAATTCAGAAGAAAATGGATAAGAAG TCCTTTCCAAAAAGGAAATTCAGGAGAAAATGGATAAGAAG < 41bp 0.488146297655993 0.704765338609514 0.2177622 0.3294499 prediction 0.409530677219028 Functional Gain - WDR3 ENSG00000065183 CDS Human protein_coding chr1:118484424 chr1:118484427 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_127349 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:118484400-118484440
64251 chr22 38203958 38203958 1 + C G rs200336403 38203954 + 38203934 38203974 41 GGCTCCCAGGCAGGCAGGCGCGCTCGGGCGAGGTAGGAGCG GGCTCCCAGGCAGGCAGGCGCGCTGGGGCGAGGTAGGAGCG < 41bp 0.460352374537703 0.704765323241341 0.24884924 0.8139133 prediction 0.409530646482683 Functional Gain - GCAT ENSG00000100116 UTR5 Human protein_coding chr22:38203954 chr22:38203958 . . 0 25 hm5C_associated_SNPs_127350 0 0 1 DDX3X POSTAR2 ENCODE chr22:38203955-38204034
64251 chr19 37266369 37266369 1 + C T CESC 37266368 + 37266348 37266388 41 CAAACACCCGCCACTCAAATCCGGGTGGTTACTGCAGAGTG CAAACACCCGCCACTCAAATCTGGGTGGTTACTGCAGAGTG < 41bp 0.561371177659495 0.766135223615265 0.9104605 0.8134291 prediction 0.40952809191154 Functional Gain - LOC728485 ENSG00000267260 CDS Human lincRNA chr19:37266368 chr19:37266369 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_127351 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:37266363-37266391
64251 chr12 66725260 66725260 1 + C A UCEC 66725259 + 66725239 66725279 41 CGCCATGACAAATGATGTCACCTGGAGCGAGGCCTCTTCGC CGCCATGACAAATGATGTCACATGGAGCGAGGCCTCTTCGC < 41bp 0.435502214564865 0.704762856589826 0.30208087 0.5268486 prediction 0.409525713179652 Functional Gain - HELB ENSG00000127311 CDS Human protein_coding chr12:66725259 chr12:66725260 synonymous SNV . 0 22 hm5C_associated_SNPs_127352 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:66725247-66725279
64251 chr5 118835027 118835027 1 + C T SKCM 118835026 + 118835006 118835046 41 TCTTAGGCTGGAGCTATTGGCCAGAAACTCCCTCCATTTTC TCTTAGGCTGGAGCTATTGGCTAGAAACTCCCTCCATTTTC < 41bp 0.463914014853493 0.704756710693972 0.06151533 0.06302753 prediction 0.409513421387943 Functional Gain - HSD17B4 ENSG00000133835 CDS Human protein_coding chr5:118835026 chr5:118835027 stopgain 0.956 0 22 hm5C_associated_SNPs_127354 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:118835020-118835040
64251 chr19 42399550 42399550 1 + C T UCEC 42399549 + 42399529 42399569 41 CTGTCCCTGGACAGCCCAGACCGGGAACCAGGTGAGAGTTT CTGTCCCTGGACAGCCCAGACTGGGAACCAGGTGAGAGTTT < 41bp 0.486552507387564 0.704756104971721 0.9020987 0.41287503 prediction 0.409512209943441 Functional Gain - ARHGEF1 ENSG00000076928 CDS Human protein_coding chr19:42399549 chr19:42399550 nonsynonymous SNV 0.955 3 22 hm5C_associated_SNPs_127355 0 0 4 FMR1 POSTAR2 ENCODE chr19:42399477-42399557
64251 chrX 103357897 103357897 1 + C G rs144020839 103357896 + 103357876 103357916 41 TCCCTGGCAGGTCATCAAAGCCGAATCCGAACTTGAATTCT TCCCTGGCAGGTCATCAAAGCGGAATCCGAACTTGAATTCT < 41bp 0.40224288495467 0.704755437986626 0.32802308 0.7409656 prediction 0.409510875973253 Functional Gain - ZCCHC18 ENSG00000166707 UTR5 Human protein_coding chrX:103357896 chrX:103357897 . . 0 22 hm5C_associated_SNPs_127357 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:103357883-103357910
64251 chr15 58834832 58834832 1 + A G UCEC 58834829 + 58834809 58834849 41 GCAGTTCCATCGGTGGAACGCACAAGATTGGGAGAATCACA GCAGTTCCATCGGTGGAACGCACGAGATTGGGAGAATCACA < 41bp 0.607709466220133 0.812462690883538 0.35710108 0.42746204 prediction 0.40950644932681 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58834829 chr15:58834832 nonsynonymous SNV 0.937 5 24 hm5C_associated_SNPs_127360 0 0 2 SND1 POSTAR2 ENCODE chr15:58834772-58834838
64251 chr18 12971179 12971179 1 + C T rs138459666 12971178 + 12971158 12971198 41 TGCTCATTCCCCCATGATCGCCGTAGGAAGTGATGACAGTA TGCTCATTCCCCCATGATCGCTGTAGGAAGTGATGACAGTA < 41bp 0.445687680026373 0.704751628676343 0.9126476 0.306833 prediction 0.409503257352685 Functional Gain - SEH1L ENSG00000085415 CDS Human protein_coding chr18:12971178 chr18:12971179 synonymous SNV . 0 22 hm5C_associated_SNPs_127361 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012389 chr18:12971157-12971184
64251 chrX 70521702 70521702 1 + C A LUAD 70521701 + 70521681 70521721 41 GGCTGTGGGCAGCACTTTGACCCTAATACCAACCTTCCTGG GGCTGTGGGCAGCACTTTGACACTAATACCAACCTTCCTGG < 41bp 0.44891500362423 0.704750455797661 0.040258914 0.06349683 prediction 0.409500911595323 Functional Gain - ITGB1BP2 ENSG00000147166 CDS Human protein_coding chrX:70521701 chrX:70521702 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_127362 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chrX:70521576-70521752
64251 chr1 150445040 150445040 1 + C T SKCM 150445039 + 150445019 150445059 41 TTGGAACATGGGACACCCTTCCAGAGAGAGCCAGTGGGGCC TTGGAACATGGGACACCCTTCTAGAGAGAGCCAGTGGGGCC < 41bp 0.623795559362513 0.828544018095847 0.5958425 0.34013557 prediction 0.40949691746667 Functional Gain - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150445039 chr1:150445040 stopgain 1.000 1 22 hm5C_associated_SNPs_127365 0 0 8 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:150444940-150445040
64251 chr14 29237117 29237117 1 + T C STAD 29237115 + 29237095 29237135 41 CTCAACGGCATCTACGAGTTCATCATGAAGAACTTCCCTTA CTCAACGGCATCTACGAGTTCACCATGAAGAACTTCCCTTA < 41bp 0.659709785531417 0.864456299642193 0.13000736 0.08374193 prediction 0.409493028221553 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237115 chr14:29237117 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_127367 0 0 1 YBX3 POSTAR2 ENCODE chr14:29237115-29237227
64251 chr5 162905726 162905726 1 + T A UCEC 162905722 + 162905702 162905742 41 ACTGGAGAAAAGTAGTGCTGCTCATACCCAGGCCACCCTGC ACTGGAGAAAAGTAGTGCTGCTCAAACCCAGGCCACCCTGC < 41bp 0.356358158134147 0.70474318448935 0.07163933 0.14482239 prediction 0.4094863689787 Functional Gain - HMMR ENSG00000072571 CDS Human protein_coding chr5:162905722 chr5:162905726 nonsynonymous SNV 0.003 2 25 hm5C_associated_SNPs_127370 0 0 13 FUS POSTAR2 SRX029328 chr5:162905700-162905731
64251 chr2 237489970 237489970 1 + C T COAD 237489969 + 237489949 237489989 41 CACTACATCCCTTTCACCTGCCGGCTGGAGCACGCCCTCTT CACTACATCCCTTTCACCTGCTGGCTGGAGCACGCCCTCTT < 41bp 0.458217103226968 0.704740455380514 0.46596158 0.34572262 prediction 0.409480910761027 Functional Gain - ACKR3 ENSG00000144476 CDS Human protein_coding chr2:237489969 chr2:237489970 nonsynonymous SNV 0.998 0 22 hm5C_associated_SNPs_127372 0 0 1 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr2:237489950-237489971
64251 chr20 31017811 31017811 1 + C T BLCA 31017810 + 31017790 31017830 41 CGTGGCCAGGCCGAGGTCACCCAGGACCCTGCCCCGCTCCT CGTGGCCAGGCCGAGGTCACCTAGGACCCTGCCCCGCTCCT < 41bp 0.611240087016685 0.815980485652125 0.75452054 0.8516188 prediction 0.40948079727088 Functional Gain - ASXL1 ENSG00000171456 CDS Human protein_coding chr20:31017810 chr20:31017811 stopgain 0.992 0 22 hm5C_associated_SNPs_127373 0 0 3 CPSF2 POSTAR2 GSE37401,GSM917670 chr20:31017799-31017825
64251 chr17 7480985 7480985 1 + C G rs143683973 7480984 + 7480964 7481004 41 GAGGAAGGTGGACTGGCTCACCGAGAAGATGCATGCTCGAG GAGGAAGGTGGACTGGCTCACGGAGAAGATGCATGCTCGAG < 41bp 0.376096922998143 0.704734206206598 0.26859245 0.9126291 prediction 0.409468412413196 Functional Gain - EIF4A1 ENSG00000161960 CDS Human protein_coding chr17:7480984 chr17:7480985 synonymous SNV . 0 22 hm5C_associated_SNPs_127376 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:7480980-7481000
64251 chr2 135630107 135630107 1 + C A LUSC 135630106 + 135630086 135630126 41 ATGCGCCCAGATCTGTGTGCCCAGGACAACCCCATGAACCC ATGCGCCCAGATCTGTGTGCCAAGGACAACCCCATGAACCC < 41bp 0.438373145218737 0.704734075173439 0.14321595 0.22327104 prediction 0.409468150346878 Functional Gain - ACMSD ENSG00000153086 CDS Human protein_coding chr2:135630106 chr2:135630107 nonsynonymous SNV 0.999 0 22 hm5C_associated_SNPs_127377 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr2:135630095-135630121
64251 chr12 51634755 51634755 1 + T C UCEC 51634752 + 51634732 51634772 41 GTATCTTCCCATGGCCCAGTCTGTGGCTGTTGGGCCTTTAG GTATCTTCCCATGGCCCAGTCTGCGGCTGTTGGGCCTTTAG < 41bp 0.568051294121366 0.772782911860574 0.14295113 0.19125324 prediction 0.409463235478416 Functional Gain - DAZAP2 ENSG00000183283 CDS Human protein_coding chr12:51634752 chr12:51634755 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_127381 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819214 chr12:51634740-51634760
64251 chr3 138669273 138669273 1 + C T LUSC 138669272 + 138669252 138669292 41 CCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCC CCTGAACCAGGTTCCGCTGTCTCCTTTCCTAGCGGGACCCC < 41bp 0.612790025610209 0.817518073440915 0.097664565 0.08155134 prediction 0.409456095661411 Functional Gain - FOXL2NB ENSG00000206262 CDS Human protein_coding chr3:138669272 chr3:138669273 synonymous SNV . 0 22 hm5C_associated_SNPs_127382 0 0 1 GEMIN5 POSTAR2 ENCODE chr3:138669272-138669332
64251 chr19 12783866 12783866 1 + C T COAD 12783865 + 12783845 12783885 41 AGCCGGGATGGGCAGTGCACCCTGGTGTCCAGCCTGGACTC AGCCGGGATGGGCAGTGCACCTTGGTGTCCAGCCTGGACTC < 41bp 0.622987652990239 0.827715640109394 0.15519464 0.080830395 prediction 0.409455974238311 Functional Gain - WDR83 ENSG00000123154 CDS Human protein_coding chr19:12783865 chr19:12783866 synonymous SNV . 0 22 hm5C_associated_SNPs_127383 0 0 1 ZNF622 POSTAR2 ENCODE chr19:12783831-12783898
64251 chr20 333907 333907 1 + C T HNSC 333906 + 333886 333926 41 GCTGGGTGTGGCGGCTCTGACCACTGGCTATGCAGTGCCCC GCTGGGTGTGGCGGCTCTGACTACTGGCTATGCAGTGCCCC < 41bp 0.455366571293473 0.704727453318024 0.072996646 0.09598005 prediction 0.409454906636048 Functional Gain - NRSN2 ENSG00000125841 CDS Human protein_coding chr20:333906 chr20:333907 synonymous SNV . 0 22 hm5C_associated_SNPs_127384 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:333899-333917
64251 chr2 75185797 75185797 1 + C G rs553748937 75185793 + 75185773 75185813 41 GTCGGCGGCCGCGCGCAGCACGCTCAAGGCCGGGATGGCGG GTCGGCGGCCGCGCGCAGCACGCTGAAGGCCGGGATGGCGG < 41bp 0.606018567297206 0.81074574464871 0.164354 0.38096046 prediction 0.409454354703008 Functional Gain - POLE4 ENSG00000115350 UTR5 Human protein_coding chr2:75185793 chr2:75185797 . . 0 25 hm5C_associated_SNPs_127385 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:75185796-75185797
64251 chr7 1131687 1131687 1 + T A LUSC 1131685 + 1131665 1131705 41 CTGGCGGTGGCGGACCTCATCCTGGTGGCCGACTCCCTCAT CTGGCGGTGGCGGACCTCATCCAGGTGGCCGACTCCCTCAT < 41bp 0.535449359601645 0.740168095939922 0.3400401 0.8730694 prediction 0.409437472676553 Functional Gain - GPER1 ENSG00000164850 CDS Human protein_coding chr7:1131685 chr7:1131687 nonsynonymous SNV 0.962 4 23 hm5C_associated_SNPs_127387 0 0 1 EIF3H POSTAR2 ENCODE chr7:1131664-1131703
64251 chr16 72142715 72142715 1 + T C UCEC 72142713 + 72142693 72142733 41 CCCTAGGGAATCGGGGAGTACGTGAACATCCGCACAGGGAT CCCTAGGGAATCGGGGAGTACGCGAACATCCGCACAGGGAT < 41bp 0.660490775259079 0.865206768293835 0.76327044 0.8176786 prediction 0.409431986069512 Functional Gain - DHX38 ENSG00000140829 CDS Human protein_coding chr16:72142713 chr16:72142715 nonsynonymous SNV 0.986 2 23 hm5C_associated_SNPs_127390 0 0 1 FASTKD2 POSTAR2 ENCODE chr16:72142698-72142722
64251 chr2 241512562 241512562 1 + C A rs532312964 241512561 + 241512541 241512581 41 GCAGGTGCTGATGAGTGCCACCCGGAGTGCATACATGGAGG GCAGGTGCTGATGAGTGCCACACGGAGTGCATACATGGAGG < 41bp 0.439603257839887 0.704713919428502 0.34546775 0.3760042 prediction 0.409427838857004 Functional Gain - RNPEPL1 ENSG00000142327 CDS Human protein_coding chr2:241512561 chr2:241512562 synonymous SNV . 0 22 hm5C_associated_SNPs_127392 0 0 2 SF3B4 POSTAR2 ENCODE chr2:241512479-241512573
64251 chr12 113624645 113624645 1 + T C CESC 113624643 + 113624623 113624663 41 CTACCGGGTCAAGGCCAGGACGTCATATGTGGATGAGACTC CTACCGGGTCAAGGCCAGGACGCCATATGTGGATGAGACTC < 41bp 0.660744958622516 0.865449826124852 0.7651631 0.89340305 prediction 0.409409735004672 Functional Gain - RITA1 ENSG00000139405 CDS Human protein_coding chr12:113624643 chr12:113624645 nonsynonymous SNV 0.226 4 23 hm5C_associated_SNPs_127394 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:113624633-113624674
64251 chr19 15220535 15220535 1 + C A rs565941164 15220534 + 15220514 15220554 41 GGTGCAGCCCCCGCCAGCCCCCCAACCAAAGCCTCCCGCAC GGTGCAGCCCCCGCCAGCCCCACAACCAAAGCCTCCCGCAC < 41bp 0.471186916302321 0.704704731025723 0.16154182 0.11474174 prediction 0.409409462051445 Functional Gain - SYDE1 ENSG00000105137 CDS Human protein_coding chr19:15220534 chr19:15220535 nonsynonymous SNV 0.821 2 22 hm5C_associated_SNPs_127395 0 0 1 EFTUD2 POSTAR2 ENCODE chr19:15220526-15220565
64251 chr16 4431767 4431767 1 + C T rs148092711 4431766 + 4431746 4431786 41 CTGCGGCTGCTGGCAGCTGCCCGCAACCCCTTCAACTGCGT CTGCGGCTGCTGGCAGCTGCCTGCAACCCCTTCAACTGCGT < 41bp 0.617496227428676 0.822199801995785 0.09534189 0.112520844 prediction 0.409407149134218 Functional Gain - VASN ENSG00000168140 CDS Human protein_coding chr16:4431766 chr16:4431767 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_127397 0 1 4 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr16:4431758-4431782
64251 chr10 114910829 114910829 1 + A G rs201875922 114910826 + 114910806 114910846 41 ATTCCGCATCCGGCCATAGTCACACCAACAGTCAAACAGGA ATTCCGCATCCGGCCATAGTCACGCCAACAGTCAAACAGGA < 41bp 0.500548364287595 0.705240759821794 0.32393032 0.40540904 prediction 0.4093847910684 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114910826 chr10:114910829 synonymous SNV . 0 24 hm5C_associated_SNPs_127404 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:114910799-114910868
64251 chr19 17838924 17838924 1 + C T rs543240242 17838923 + 17838903 17838943 41 GAGCCCAGTGAGAAGGGAGGCCGGGCACCCCTGTCCAGAAA GAGCCCAGTGAGAAGGGAGGCTGGGCACCCCTGTCCAGAAA < 41bp 0.562261713596855 0.766948157114955 0.36709404 0.30226997 prediction 0.409372887036199 Functional Gain - MAP1S ENSG00000130479 CDS Human protein_coding chr19:17838923 chr19:17838924 nonsynonymous SNV 0.020 3 22 hm5C_associated_SNPs_127405 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:17838914-17838940
64251 chr4 134072659 134072659 1 + A G STAD 134072656 + 134072636 134072676 41 GTCGATCCAGGTACAAGTGTCGGATGTGAACGACAACGCGC GTCGATCCAGGTACAAGTGTCGGGTGTGAACGACAACGCGC < 41bp 0.626852715228875 0.831538380736503 0.8267392 0.9251945 prediction 0.409371331015256 Functional Gain - PCDH10 ENSG00000138650 CDS Human protein_coding chr4:134072656 chr4:134072659 nonsynonymous SNV 0.970 4 24 hm5C_associated_SNPs_127406 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr4:134072634-134072667
64251 chr11 32605400 32605400 1 + C A rs113415019 32605396 + 32605376 32605416 41 CCTTTTCCGGTCGGCGTGGTCTTGCGAGTGGAGTGTCCGCT CCTTTTCCGGTCGGCGTGGTCTTGAGAGTGGAGTGTCCGCT < 41bp 0.678650457898798 0.883330782147937 0.35436916 0.52910846 prediction 0.409360648498278 Functional Gain - EIF3M ENSG00000149100 UTR5 Human protein_coding chr11:32605396 chr11:32605400 . . 0 25 hm5C_associated_SNPs_127409 0 0 24 TARDBP POSTAR2 DRA001158,DRS012387 chr11:32605354-32605434
64251 chr12 4705429 4705429 1 + A G UCEC 4705426 + 4705406 4705446 41 AAAACAATGAGCTGGTGGCCCTGAAAATCATCAGGAACAAG AAAACAATGAGCTGGTGGCCCTGGAAATCATCAGGAACAAG < 41bp 0.575910787286773 0.780590435246886 0.14220744 0.22584668 prediction 0.409359295920225 Functional Gain - DYRK4 ENSG00000010219 CDS Human protein_coding chr12:4705426 chr12:4705429 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127410 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:4705395-4705433
64251 chr11 12241764 12241764 1 + A G LIHC 12241761 + 12241741 12241781 41 TCCCCAGGACTACATCGACACAGAGATGCTGCTGTGTGCGG TCCCCAGGACTACATCGACACAGGGATGCTGCTGTGTGCGG < 41bp 0.46294738140954 0.70467684257487 0.44431156 0.86563814 prediction 0.40935368514974 Functional Gain - MICAL2 ENSG00000133816 CDS Human protein_coding chr11:12241761 chr11:12241764 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_127412 0 0 1 SF3B4 POSTAR2 ENCODE chr11:12241691-12241779
64251 chrX 110970894 110970894 1 + T C COAD 110970891 + 110970871 110970911 41 GTTGTGTGAATAAGGAGTCCCAGTATGGATTTACCCCAGGG GTTGTGTGAATAAGGAGTCCCAGCATGGATTTACCCCAGGG < 41bp 0.551369656807494 0.756035416552441 0.037053943 0.023123443 prediction 0.409331519489894 Functional Gain - ALG13 ENSG00000101901 CDS Human protein_coding chrX:110970891 chrX:110970894 nonsynonymous SNV 0.685 4 24 hm5C_associated_SNPs_127415 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chrX:110970869-110970896
64251 chr22 31608400 31608400 1 + C T rs145674338 31608399 + 31608379 31608419 41 CCGCGCTCCCGGGACCATGTCCGCGCTGGCGGGTAAGGAAG CCGCGCTCCCGGGACCATGTCTGCGCTGGCGGGTAAGGAAG < 41bp 0.568852211069958 0.773517107543849 0.4749969 0.32359326 prediction 0.409329792947781 Functional Gain - LIMK2 ENSG00000182541 CDS Human protein_coding chr22:31608399 chr22:31608400 synonymous SNV . 0 22 hm5C_associated_SNPs_127416 0 0 5 NCBP2 POSTAR2 ENCODE chr22:31608365-31608411
64251 chr1 156563852 156563852 1 + C T rs942963 156563851 + 156563831 156563871 41 CCTGCCACCCTACCCTGACACCGAGTGTGTCTATCGTCTGC CCTGCCACCCTACCCTGACACTGAGTGTGTCTATCGTCTGC < 41bp 0.459164850380257 0.704664322539546 0.10892877 0.03532064 prediction 0.409328645079092 Functional Gain - NAXE ENSG00000163382 CDS Human protein_coding chr1:156563851 chr1:156563852 synonymous SNV . 0 22 hm5C_associated_SNPs_127418 0 0 8 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:156563841-156563862
64251 chr10 16528493 16528493 1 + C A UCEC 16528489 + 16528469 16528509 41 TCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCT TCCAGGCCACAGCTCATGCCCAGGATCAGCTTGGTTGTCCT < 41bp 0.738671886829292 0.943335784396774 0.4445744 0.40119755 prediction 0.409327795134963 Functional Gain - PTER ENSG00000165983 CDS Human protein_coding chr10:16528489 chr10:16528493 nonsynonymous SNV 0.937 0 25 hm5C_associated_SNPs_127420 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr10:16528480-16528525
64251 chr20 32951147 32951147 1 + C G rs563046157 32951146 + 32951126 32951166 41 ACTGAGGAGTCGCCGCCGCCCCGAGTCCCGGTAAACCCCCG ACTGAGGAGTCGCCGCCGCCCGGAGTCCCGGTAAACCCCCG < 41bp 0.648288139819223 0.852951414962715 0.21714458 0.69673556 prediction 0.409326550286985 Functional Gain - ITCH ENSG00000078747 UTR5 Human protein_coding chr20:32951146 chr20:32951147 . . 0 22 hm5C_associated_SNPs_127421 0 0 6 DDX3X POSTAR2 ENCODE chr20:32951110-32951157
64251 chr2 113940475 113940475 1 + C T SKCM 113940474 + 113940454 113940494 41 CCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGT CCGGGGAGCCCAAAGCAGAACTGGAGCACGTCCACACAGGT < 41bp 0.581650758877214 0.786312782013991 0.78923696 0.23314294 prediction 0.409324046273555 Functional Gain - PSD4 ENSG00000125637 CDS Human protein_coding chr2:113940474 chr2:113940475 nonsynonymous SNV 0.369 2 22 hm5C_associated_SNPs_127422 0 0 1 DDX55 POSTAR2 ENCODE chr2:113940445-113940489
64251 chr17 16120579 16120579 1 + C G SKCM 16120575 + 16120555 16120595 41 GCTCCTGTGTGTGGCGTTGGCGGTCTTGGCATGGGGCTTCC GCTCCTGTGTGTGGCGTTGGCGGTGTTGGCATGGGGCTTCC < 41bp 0.682548294177068 0.887209963541585 0.8089049 0.87610745 prediction 0.409323338729035 Functional Gain - PIGL ENSG00000108474 CDS Human protein_coding chr17:16120575 chr17:16120579 synonymous SNV . 0 25 hm5C_associated_SNPs_127424 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr17:16120552-16120599
64251 chr22 38453534 38453534 1 + C G rs373471158 38453533 + 38453513 38453553 41 GCTCCCCAGGGCCTGGAGACCCGTGGGGCGGACTCTGGGAT GCTCCCCAGGGCCTGGAGACCGGTGGGGCGGACTCTGGGAT < 41bp 0.638212827709201 0.842871817862513 0.88719326 0.90342134 prediction 0.409317980306623 Functional Gain - PICK1 ENSG00000233739 ncRNA_intronic Human antisense chr22:38453533 chr22:38453534 . . 0 22 hm5C_associated_SNPs_127425 0 0 1 NCBP2 POSTAR2 ENCODE chr22:38453412-38453569
64251 chr18 61654442 61654442 1 + C A LUSC 61654438 + 61654418 61654458 41 AGCCAAGATTCTGTGCAGACCACCCTTTTCTTTTCTTCATC AGCCAAGATTCTGTGCAGACCACCATTTTCTTTTCTTCATC < 41bp 0.286121635559611 0.704654405784638 0.017458707 0.08902922 prediction 0.409308811569277 Functional Gain - SERPINB8 ENSG00000166401 CDS Human protein_coding chr18:61654438 chr18:61654442 nonsynonymous SNV 0.691 4 25 hm5C_associated_SNPs_127427 0 0 1 ELAVL1 POSTAR2 GSE29780,GSM738185 chr18:61654435-61654460
64251 chr1 167742573 167742573 1 + T C LUSC 167742570 + 167742550 167742590 41 AGCATGATTCTGGCTGTCCTCTATAGAAGGAAAAACTCTAA AGCATGATTCTGGCTGTCCTCTACAGAAGGAAAAACTCTAA < 41bp 0.577105912172836 0.781759744872352 0.123360306 0.31730884 prediction 0.409307665399032 Functional Gain - MPZL1 ENSG00000197965 CDS Human protein_coding chr1:167742570 chr1:167742573 synonymous SNV . 0 24 hm5C_associated_SNPs_127428 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr1:167742541-167742579
64251 chr12 101674945 101674945 1 + C A LIHC 101674944 + 101674924 101674964 41 GTTAATATTGATATTATTCACCGGATTGATAGAACTGCAAG GTTAATATTGATATTATTCACAGGATTGATAGAACTGCAAG < 41bp 0.462156288033321 0.704649469123977 0.5313442 0.86734366 prediction 0.409298938247953 Functional Gain - UTP20 ENSG00000120800 CDS Human protein_coding chr12:101674944 chr12:101674945 synonymous SNV . 0 22 hm5C_associated_SNPs_127432 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:101674930-101674965
64251 chr22 35783055 35783055 1 + T A STAD 35783051 + 35783031 35783071 41 CTTCACCTTCCCCAACATTGCCAGTGCCACCAAGTTCAAGC CTTCACCTTCCCCAACATTGCCAGAGCCACCAAGTTCAAGC < 41bp 0.365032419474954 0.704644094570416 0.04670033 0.38769728 prediction 0.409288189140831 Functional Gain - HMOX1 ENSG00000100292 CDS Human protein_coding chr22:35783051 chr22:35783055 nonsynonymous SNV 0.833 4 25 hm5C_associated_SNPs_127436 0 0 1 RPS3 POSTAR2 ENCODE chr22:35783025-35783159
64251 chr19 50391759 50391759 1 + C T SKCM 50391758 + 50391738 50391778 41 AGCCCCTCGCCCACCGCCTCCCCGCTGCCTCTGTCGCCCAC AGCCCCTCGCCCACCGCCTCCTCGCTGCCTCTGTCGCCCAC < 41bp 0.465810673716831 0.704638355676021 0.20483005 0.35665548 prediction 0.409276711352041 Functional Gain - TBC1D17 ENSG00000104946 CDS Human protein_coding chr19:50391758 chr19:50391759 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_127439 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:50391753-50391787
64251 chr21 46363697 46363697 1 + C A UCEC 46363693 + 46363673 46363713 41 GCTGGACGTGAGGAGTGTCACTTCCGTCAGGAGAGGTGAGG GCTGGACGTGAGGAGTGTCACTTCAGTCAGGAGAGGTGAGG < 41bp 0.284585366449952 0.704636896578364 0.100061595 0.19186041 prediction 0.409273793156729 Functional Gain - FAM207A ENSG00000160256 CDS Human protein_coding chr21:46363693 chr21:46363697 synonymous SNV . 0 25 hm5C_associated_SNPs_127440 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr21:46363666-46363698
64251 chr20 47557765 47557765 1 + A G UCEC 47557762 + 47557742 47557782 41 TTAAAGCAGAAATAGAAAAGCAGAGGTAAGCTATAGCACTA TTAAAGCAGAAATAGAAAAGCAGGGGTAAGCTATAGCACTA < 41bp 0.480411623008049 0.704633713206688 0.77124596 0.9276997 prediction 0.409267426413377 Functional Gain - ARFGEF2 ENSG00000124198 CDS Human protein_coding chr20:47557762 chr20:47557765 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_127441 0 0 9 EFTUD2 POSTAR2 ENCODE chr20:47557722-47557911
64251 chr18 57567228 57567228 1 + A G rs72970003 57567225 + 57567205 57567245 41 GTGGTCTCTGGCGCGGGGATCTCAGAGTTTCCCGGGCACTC GTGGTCTCTGGCGCGGGGATCTCGGAGTTTCCCGGGCACTC < 41bp 0.609445997137092 0.814070298936679 0.87311924 0.9100578 prediction 0.409248603599174 Functional Gain - PMAIP1 ENSG00000141682 UTR5 Human protein_coding chr18:57567225 chr18:57567228 . . 0 24 hm5C_associated_SNPs_127444 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819214 chr18:57567220-57567300
64251 chr3 38565469 38565469 1 + C T UCEC 38565468 + 38565448 38565488 41 CCGCAGAAGCTCAGTATCTACCGAACCACTGGCGCTAGGGG CCGCAGAAGCTCAGTATCTACTGAACCACTGGCGCTAGGGG < 41bp 0.61248670361578 0.817109448723011 0.32142952 0.122045904 prediction 0.409245490214462 Functional Gain - EXOG ENSG00000157036 CDS Human protein_coding chr3:38565468 chr3:38565469 synonymous SNV . 0 22 hm5C_associated_SNPs_127445 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:38565455-38565493
64251 chr11 130332481 130332481 1 + C A LUAD 130332477 + 130332457 130332497 41 TACACCCTGAGCCAGCAGTGCGAGCTGGCTTTTGGCGTGGG TACACCCTGAGCCAGCAGTGCGAGATGGCTTTTGGCGTGGG < 41bp 0.284609249694177 0.704619047540816 0.43496436 0.83399403 prediction 0.409238095081632 Functional Gain - ADAMTS15 ENSG00000166106 CDS Human protein_coding chr11:130332477 chr11:130332481 nonsynonymous SNV 0.999 2 25 hm5C_associated_SNPs_127448 0 0 1 XRN2 POSTAR2 ENCODE chr11:130332478-130332482
64251 chr2 133403798 133403798 1 - G A COAD 133403799 - 133403779 133403819 41 GGCCTGTCTCATCGCCTCTGCCGGGTACCAGTCCTTCTGCT GGCCTGTCTCATCGCCTCTGCTGGGTACCAGTCCTTCTGCT < 41bp 0.468432708669246 0.704609540990585 0.78999436 0.49460393 prediction 0.409219081981169 Functional Gain - LYPD1 ENSG00000150551 CDS Human protein_coding chr2:133403799 chr2:133403798 synonymous SNV . 0 22 hm5C_associated_SNPs_127452 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:133403788-133403811
64251 chr15 98513944 98513944 1 + C T rs76962941 98513943 + 98513923 98513963 41 TTTGCCTGTATACAAGAATTCCGGTTTCAACCCCCACCTCT TTTGCCTGTATACAAGAATTCTGGTTTCAACCCCCACCTCT < 41bp 0.462436405457495 0.704605116839656 0.8307816 0.3406111 prediction 0.409210233679312 Functional Gain - ARRDC4 ENSG00000140450 CDS Human protein_coding chr15:98513943 chr15:98513944 nonsynonymous SNV 0.804 2 22 hm5C_associated_SNPs_127456 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr15:98513938-98513960
64251 chr8 86158082 86158082 1 + C T rs200216745 86158081 + 86158061 86158101 41 TCGAGGCTCAGCTGGGGATACCGCGAGCACAACGGTGAGCG TCGAGGCTCAGCTGGGGATACTGCGAGCACAACGGTGAGCG < 41bp 0.584509579920594 0.789113734995243 0.5530726 0.5920356 prediction 0.409208310149299 Functional Gain - CA13 ENSG00000185015 CDS Human protein_coding chr8:86158081 chr8:86158082 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_127457 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr8:86158066-86158094
64251 chr19 58331292 58331292 1 + T A HNSC 58331288 + 58331268 58331308 41 CCCAAGTAGTCCGATGGCTGCGGCTGCGCCGAGGCGCCCTA CCCAAGTAGTCCGATGGCTGCGGCAGCGCCGAGGCGCCCTA < 41bp 0.679694791418621 0.884294484500285 0.64387554 0.7917078 prediction 0.409199386163329 Functional Gain - ZNF552;FKBP1AP1 ENSG00000268750;ENSG00000269343 CDS Human other chr19:58331288 chr19:58331292 synonymous SNV . 0 25 hm5C_associated_SNPs_127460 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:58331270-58331310
64251 chr1 26507021 26507021 1 + C G THCA 26507020 + 26507000 26507040 41 AACCTGCTCCAGCTCTGCCCCCAAAGCCTCGAGGCTCTGGC AACCTGCTCCAGCTCTGCCCCGAAAGCCTCGAGGCTCTGGC < 41bp 0.37205508144993 0.704598451335759 0.047045738 0.107346535 prediction 0.409196902671518 Functional Gain - CNKSR1 ENSG00000142675 CDS Human protein_coding chr1:26507020 chr1:26507021 nonsynonymous SNV 0.512 1 22 hm5C_associated_SNPs_127462 0 0 1 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr1:26506999-26507025
64251 chr10 103904794 103904794 1 + A G STAD 103904791 + 103904771 103904811 41 CGCCAGCGGCGTTGACATTCCCCAGGAGAAGAGGCCCCTAG CGCCAGCGGCGTTGACATTCCCCGGGAGAAGAGGCCCCTAG < 41bp 0.459177786664482 0.704573231539526 0.08441877 0.69369346 prediction 0.409146463079052 Functional Gain - PPRC1 ENSG00000148840 CDS Human protein_coding chr10:103904791 chr10:103904794 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127466 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:103904784-103904811
64251 chr22 50316901 50316901 1 + C G rs111557567 50316897 + 50316877 50316917 41 TCCAGATGTGGACGAGTGTGCGGCCGAGCCGCCTCCCTGCA TCCAGATGTGGACGAGTGTGCGGCGGAGCCGCCTCCCTGCA < 41bp 0.678243186231681 0.882811627160785 0.854738 0.9071897 prediction 0.409136881858207 Functional Gain - CRELD2 ENSG00000184164 CDS Human protein_coding chr22:50316897 chr22:50316901 synonymous SNV . 0 25 hm5C_associated_SNPs_127468 0 0 4 BUD13 POSTAR2 ENCODE chr22:50316883-50316933
64251 chr21 48071857 48071857 1 + C A OV 48071853 + 48071833 48071873 41 ATGTCCTCCTTGCCTGCTGTCTGCCTGTTCTCAGAGCCCCT ATGTCCTCCTTGCCTGCTGTCTGCATGTTCTCAGAGCCCCT < 41bp 0.308428763570434 0.704567593378735 0.014140278 0.33500862 prediction 0.40913518675747 Functional Gain - PRMT2 ENSG00000160310 CDS Human protein_coding chr21:48071853 chr21:48071857 nonsynonymous SNV 0.455 1 25 hm5C_associated_SNPs_127469 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr21:48071836-48071880
64251 chr6 88315680 88315680 1 + A G LIHC 88315677 + 88315657 88315697 41 TTTGACATTCGGAAGTCTAACAGAGGCCCTTCAGAATAATG TTTGACATTCGGAAGTCTAACAGGGGCCCTTCAGAATAATG < 41bp 0.587704402990421 0.792262373171197 0.43738705 0.8087275 prediction 0.409115940361552 Functional Gain - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88315677 chr6:88315680 nonsynonymous SNV 0.993 1 24 hm5C_associated_SNPs_127473 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:88315656-88315733
64251 chr3 51708346 51708346 1 + T A KIRC 51708344 + 51708324 51708364 41 TCGGACCTGCTACTACTGGGCCTGATTGGGGGCCTGACTCT TCGGACCTGCTACTACTGGGCCAGATTGGGGGCCTGACTCT < 41bp 0.508349296001036 0.712906990254376 0.044692785 0.20722628 prediction 0.40911538850668 Functional Gain - TEX264 ENSG00000164081 CDS Human protein_coding chr3:51708344 chr3:51708346 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_127474 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:51708318-51708365
64251 chr17 1783964 1783964 1 + A G LIHC 1783961 + 1783941 1783981 41 CATTGCGAATCCTGACATCCCAGAGGCCTATAAGCTTCGTG CATTGCGAATCCTGACATCCCAGGGGCCTATAAGCTTCGTG < 41bp 0.616240143442842 0.820786759435999 0.5314364 0.8845277 prediction 0.409093231986314 Functional Gain - RPA1 ENSG00000132383 CDS Human protein_coding chr17:1783961 chr17:1783964 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127478 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:1783850-1783967
64251 chr7 1027006 1027006 1 + C T LUAD 1027005 + 1026985 1027025 41 CGGGTGCAGGAGGAGCTAGACCGCGTGCTGGGCCCTGGGCG CGGGTGCAGGAGGAGCTAGACTGCGTGCTGGGCCCTGGGCG < 41bp 0.560307338076913 0.764849255772103 0.32783878 0.3522768 prediction 0.409083835390379 Functional Gain - CYP2W1 ENSG00000073067 CDS Human protein_coding chr7:1027005 chr7:1027006 nonsynonymous SNV 0.844 3 22 hm5C_associated_SNPs_127481 0 0 3 PPIG POSTAR2 ENCODE chr7:1027001-1027057
64251 chr19 7711208 7711208 1 + C T SARC 7711207 + 7711187 7711227 41 ATCAGCTGTCCCGCTGGACCCCGGTCATCAAGGATGTAATG ATCAGCTGTCCCGCTGGACCCTGGTCATCAAGGATGTAATG < 41bp 0.47003943891281 0.704541909107371 0.072814316 0.020715863 prediction 0.409083818214741 Functional Gain - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7711207 chr19:7711208 nonsynonymous SNV 0.337 5 22 hm5C_associated_SNPs_127482 1 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:7711179-7711218
64251 chr1 168550338 168550338 1 + A G rs35085347 168550335 + 168550315 168550355 41 GTCTGTGCTGATCCACAAGCCACATGGGTGAGAGACGTGGT GTCTGTGCTGATCCACAAGCCACGTGGGTGAGAGACGTGGT < 41bp 0.589854529062868 0.794386152383344 0.27603304 0.32802522 prediction 0.409063246640953 Functional Gain - XCL1 ENSG00000143184 CDS Human protein_coding chr1:168550335 chr1:168550338 synonymous SNV . 0 24 hm5C_associated_SNPs_127486 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:168550312-168550350
64251 chr15 41749916 41749916 1 + T A rs35588442 41749912 + 41749892 41749932 41 CAACAGCTCCTCTTCCAGTTCAGATTCAGACTCTTCCTCAG CAACAGCTCCTCTTCCAGTTCAGAATCAGACTCTTCCTCAG < 41bp 0.362781934585237 0.704528338995293 0.06679022 0.1073007 prediction 0.409056677990586 Functional Gain - RTF1 ENSG00000137815 CDS Human protein_coding chr15:41749912 chr15:41749916 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_127487 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819210 chr15:41749916-41749917
64251 chr8 126448568 126448568 1 + A G CESC 126448565 + 126448545 126448585 41 CCTCTTGAGACGGGAGCCCTCCGAGAGACTCACTGCCCCCG CCTCTTGAGACGGGAGCCCTCCGGGAGACTCACTGCCCCCG < 41bp 0.608615449808048 0.813143260547626 0.8627962 0.93636924 prediction 0.409055621479157 Functional Gain - TRIB1 ENSG00000173334 CDS Human protein_coding chr8:126448565 chr8:126448568 nonsynonymous SNV 0.988 3 24 hm5C_associated_SNPs_127489 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr8:126448560-126448580
64251 chr19 57932324 57932324 1 + T C COAD 57932322 + 57932302 57932342 41 ACAGCTGTACACTGAAGAGTCATCAGAGAGTTCACACTGGA ACAGCTGTACACTGAAGAGTCACCAGAGAGTTCACACTGGA < 41bp 0.423875871722868 0.704508905888293 0.10682243 0.09610924 prediction 0.409017811776586 Functional Gain - ZNF17 ENSG00000186272 CDS Human protein_coding chr19:57932322 chr19:57932324 synonymous SNV . 0 23 hm5C_associated_SNPs_127496 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr19:57932305-57932341
64251 chr9 119461306 119461306 1 + C A STAD 119461302 + 119461282 119461322 41 TTCCTTGGGGCAGATCTACCCAACCTCACTCCTCTCTCAGT TTCCTTGGGGCAGATCTACCCAACATCACTCCTCTCTCAGT < 41bp 0.286891634006976 0.70450341642682 0.11521247 0.060414165 prediction 0.409006832853639 Functional Gain - TRIM32 ENSG00000119401 CDS Human protein_coding chr9:119461302 chr9:119461306 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_127497 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:119461277-119461315
64251 chr16 85688458 85688458 1 + A G UCEC 85688455 + 85688435 85688475 41 GTACCGTGACCGAGGACTACCTGAGAAGCTTCCGGCCCTAC GTACCGTGACCGAGGACTACCTGGGAAGCTTCCGGCCCTAC < 41bp 0.621044036556546 0.825545117295705 0.40996033 0.88093805 prediction 0.409002161478318 Functional Gain - GSE1 ENSG00000131149 CDS Human protein_coding chr16:85688455 chr16:85688458 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_127499 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:85688432-85688462
64251 chr4 6642901 6642901 1 + C T SKCM 6642900 + 6642880 6642920 41 CGAGAAGGCCGAGGAGAAGGCCAAGGAGATTGCGAAGATGG CGAGAAGGCCGAGGAGAAGGCTAAGGAGATTGCGAAGATGG < 41bp 0.486762828641218 0.704500590932073 0.28292668 0.331231 prediction 0.409001181864145 Functional Gain - MRFAP1 ENSG00000179010 CDS Human protein_coding chr4:6642900 chr4:6642901 synonymous SNV . 0 22 hm5C_associated_SNPs_127500 0 0 10 CPSF6 POSTAR2 GSE37401,GSM917665 chr4:6642874-6642909
64251 chr10 46222737 46222737 1 + C G rs565627677 46222736 + 46222716 46222756 41 TCCTCGGCCTGTGCTGGCAGCCTCGGAGCCCACCGAGCCGG TCCTCGGCCTGTGCTGGCAGCGTCGGAGCCCACCGAGCCGG < 41bp 0.46094922739782 0.704492076970781 0.14776945 0.42828763 prediction 0.408984153941563 Functional Gain - WASHC2C ENSG00000172661 UTR5 Human protein_coding chr10:46222736 chr10:46222737 . . 0 22 hm5C_associated_SNPs_127503 0 0 2 DDX3X POSTAR2 ENCODE chr10:46222694-46222766
64251 chr16 84695222 84695222 1 + T C LGG 84695220 + 84695200 84695240 41 GCGGGCACCATCTACAAAGACTTCGTGTACATCTCGGGGGG GCGGGCACCATCTACAAAGACTCCGTGTACATCTCGGGGGG < 41bp 0.422557263207628 0.704491062367539 0.07370657 0.12262851 prediction 0.408982124735078 Functional Gain - KLHL36 ENSG00000135686 CDS Human protein_coding chr16:84695220 chr16:84695222 nonsynonymous SNV 0.989 1 23 hm5C_associated_SNPs_127504 0 0 1 GRWD1 POSTAR2 ENCODE chr16:84695206-84695269
64251 chr14 70175520 70175520 1 + A G UCEC 70175517 + 70175497 70175537 41 TGTGTGCCACCTGCTGACCCCAGAGTACAGATTGTGCTGTC TGTGTGCCACCTGCTGACCCCAGGGTACAGATTGTGCTGTC < 41bp 0.61748744134648 0.821975051721448 0.8628616 0.8884361 prediction 0.408975220749937 Functional Gain - SUSD6 ENSG00000100647 CDS Human protein_coding chr14:70175517 chr14:70175520 synonymous SNV . 0 24 hm5C_associated_SNPs_127507 0 0 2 SND1 POSTAR2 ENCODE chr14:70175500-70175633
64251 chr1 246830293 246830293 1 + A G rs3795471 246830290 + 246830270 246830310 41 ATCCTATTGCGGGGTCATTACGCAAAAATTCAATCATACCT ATCCTATTGCGGGGTCATTACGCGAAAATTCAATCATACCT < 41bp 0.584314457711512 0.788799544936471 0.11900592 0.18214741 prediction 0.408970174449916 Functional Gain - CNST ENSG00000162852 UTR3 Human protein_coding chr1:246830290 chr1:246830293 . . 0 24 hm5C_associated_SNPs_127508 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr1:246830291-246830316
64251 chr16 20935348 20935348 1 + C A LUSC 20935347 + 20935327 20935367 41 TCTGCCTCCAATGGGCCTTACCCCACTCCGAGGCCGGGGAC TCTGCCTCCAATGGGCCTTACACCACTCCGAGGCCGGGGAC < 41bp 0.618566759254664 0.823050128025752 0.28858188 0.33208197 prediction 0.408966737542175 Functional Gain - LYRM1 ENSG00000102897 CDS Human protein_coding chr16:20935347 chr16:20935348 synonymous SNV . 0 22 hm5C_associated_SNPs_127509 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:20935341-20935374
64251 chr2 241817508 241817508 1 + T G STAD 241817504 + 241817484 241817524 41 TATGACTGGAGAGACATCGTCAGCTACGTCATAGACCACTT TATGACTGGAGAGACATCGTCAGCGACGTCATAGACCACTT < 41bp 0.514807355275121 0.719281886405189 0.834621 0.87046623 prediction 0.408949062260137 Functional Gain - AGXT ENSG00000172482 CDS Human protein_coding chr2:241817504 chr2:241817508 nonsynonymous SNV 0.234 5 25 hm5C_associated_SNPs_127511 0 0 2 GRWD1 POSTAR2 ENCODE chr2:241817471-241817567
64251 chr7 65225426 65225426 1 + T G rs111970336 65225422 + 65225402 65225442 41 ATCCAACAGGCTGTGTGGTTCCGGTGCTGGTGCCGTGGAAG ATCCAACAGGCTGTGTGGTTCCGGGGCTGGTGCCGTGGAAG < 41bp 0.538987155497065 0.743460549654341 0.29602736 0.83628094 prediction 0.408946788314551 Functional Gain - CCT6P1 ENSG00000228409 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:65225422 chr7:65225426 . . 0 25 hm5C_associated_SNPs_127512 0 0 8 PRPF8 POSTAR2 ENCODE chr7:65225410-65225446
64251 chr2 29169540 29169540 1 + C T BRCA 29169539 + 29169519 29169559 41 TGAAGAGGAAGATGAGGATGCCGAAGGAAAAGATGAAGAAA TGAAGAGGAAGATGAGGATGCTGAAGGAAAAGATGAAGAAA < 41bp 0.580751550563378 0.785211709588785 0.7983095 0.63217986 prediction 0.408920318050814 Functional Gain - WDR43 ENSG00000163811 CDS Human protein_coding chr2:29169539 chr2:29169540 synonymous SNV . 0 22 hm5C_associated_SNPs_127519 0 0 37 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:29169515-29169542
64251 chr16 89631296 89631296 1 + T C rs530419366 89631294 + 89631274 89631314 41 GCACCTGGAGTAGGTAATGCCATGTGGTGACGTGAATGGAG GCACCTGGAGTAGGTAATGCCACGTGGTGACGTGAATGGAG < 41bp 0.563118264381751 0.76756699916628 0.6001041 0.73240346 prediction 0.408897469569057 Functional Gain - RPL13 ENSG00000167526 downstream Human protein_coding chr16:89631294 chr16:89631296 . . 0 23 hm5C_associated_SNPs_127521 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:89631272-89631329
64251 chr1 9778766 9778766 1 + C T rs28730672 9778765 + 9778745 9778785 41 TCTACAGCTGGTGGTGCAGGCCGGGCTTTTCCACGGCAACG TCTACAGCTGGTGGTGCAGGCTGGGCTTTTCCACGGCAACG < 41bp 0.580538330676854 0.784973580833244 0.82432115 0.545794 prediction 0.40887050031278 Functional Gain - PIK3CD ENSG00000171608 CDS Human protein_coding chr1:9778765 chr1:9778766 synonymous SNV . 0 22 hm5C_associated_SNPs_127527 0 0 2 BUD13 POSTAR2 ENCODE chr1:9778735-9778773
64251 chr9 96214360 96214360 1 + C A LGG 96214356 + 96214336 96214376 41 CTGGTGGACGCCGACAACTGCCTGCACCGCCTCTACGGCGG CTGGTGGACGCCGACAACTGCCTGAACCGCCTCTACGGCGG < 41bp 0.318853348684181 0.704432776554272 0.079351336 0.10998818 prediction 0.408865553108543 Functional Gain - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96214356 chr9:96214360 nonsynonymous SNV 0.999 0 25 hm5C_associated_SNPs_127529 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:96214350-96214378
64251 chr20 45362402 45362402 1 + C A UCEC 45362401 + 45362381 45362421 41 TCTTTGTCTGACAGGTTCACCCTGAGCTTTGGCCACAGGCA TCTTTGTCTGACAGGTTCACCATGAGCTTTGGCCACAGGCA < 41bp 0.444340955491158 0.704420518634172 0.18570116 0.39192984 prediction 0.408841037268344 Functional Gain - SLC2A10 ENSG00000197496 CDS Human protein_coding chr20:45362401 chr20:45362402 nonsynonymous SNV 0.373 1 22 hm5C_associated_SNPs_127536 0 0 1 SND1 POSTAR2 ENCODE chr20:45362401-45362438
64251 chr19 50189873 50189873 1 + C T SKCM 50189872 + 50189852 50189892 41 GCGCCCCCAGGCCCCGAGTCCCCGTACACGCACTGGAAGCA GCGCCCCCAGGCCCCGAGTCCTCGTACACGCACTGGAAGCA < 41bp 0.435998017939727 0.7044117319675 0.18201101 0.22347513 prediction 0.408823463934999 Functional Gain - PRMT1 ENSG00000126457 CDS Human protein_coding chr19:50189872 chr19:50189873 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_127540 0 0 8 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr19:50189860-50189880
64251 chr19 35530897 35530897 1 + C G rs72550275 35530896 + 35530876 35530916 41 TCCAGCTCCTGCCCCGCCGGCCGCGCACCGCCATGCATGAT TCCAGCTCCTGCCCCGCCGGCGGCGCACCGCCATGCATGAT < 41bp 0.382429116810848 0.704407916375915 0.0819301 0.27219218 prediction 0.408815832751829 Functional Gain - SCN1B ENSG00000105711 UTR3 Human protein_coding chr19:35530896 chr19:35530897 . . 0 22 hm5C_associated_SNPs_127541 0 0 3 RBFOX2 POSTAR2 ENCODE chr19:35530839-35530931
64251 chr8 38069508 38069508 1 + C T rs60530611 38069507 + 38069487 38069527 41 ATACTAAATCTATTAGCTGTCCCCACTCATAAACCAAACCA ATACTAAATCTATTAGCTGTCTCCACTCATAAACCAAACCA < 41bp 0.53157327772634 0.735978015674008 0.012563944 0.85094666 prediction 0.408809475895336 Functional Gain - BAG4 ENSG00000156735 UTR3 Human protein_coding chr8:38069507 chr8:38069508 . . 0 22 hm5C_associated_SNPs_127543 0 0 13 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:38069481-38069534
64251 chr11 779976 779976 1 + C T rs537846905 779975 + 779955 779995 41 TTCCAGGGTACTGCTATCTCCCCCGCTCCAAGAGGCCAGCC TTCCAGGGTACTGCTATCTCCTCCGCTCCAAGAGGCCAGCC < 41bp 0.509368675692876 0.713764937964947 0.23919582 0.24635491 prediction 0.408792524544141 Functional Gain - LOC171391 ENSG00000255284 intronic Human lincRNA chr11:779975 chr11:779976 . . 0 22 hm5C_associated_SNPs_127546 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:779938-779976
64251 chr8 38913151 38913151 1 + A G UCEC 38913148 + 38913128 38913168 41 AACCAGTGAGTGTGATGTTCCAGAGTACTGCAATGGTTCTT AACCAGTGAGTGTGATGTTCCAGGGTACTGCAATGGTTCTT < 41bp 0.595378415036324 0.799761429109908 0.77846 0.89858556 prediction 0.408766028147168 Functional Gain - ADAM9 ENSG00000168615 CDS Human protein_coding chr8:38913148 chr8:38913151 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_127549 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr8:38913095-38913189
64251 chr11 126147431 126147431 1 + C A GBM 126147427 + 126147407 126147447 41 TGTCAACATGTACTTTGCTACTGGCTTCAGTGGTCACGGGC TGTCAACATGTACTTTGCTACTGGATTCAGTGGTCACGGGC < 41bp 0.732728903909737 0.937105911309154 0.07871944 0.167645 prediction 0.408754014798834 Functional Gain - FOXRED1 ENSG00000110074 CDS Human protein_coding chr11:126147427 chr11:126147431 synonymous SNV . 0 25 hm5C_associated_SNPs_127553 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:126147414-126147441
64251 chr19 1257108 1257108 1 + C T HNSC 1257107 + 1257087 1257127 41 CCCGGCGGGACGCGCGGGGTCCGTACCACTGGTCACCCAGC CCCGGCGGGACGCGCGGGGTCTGTACCACTGGTCACCCAGC < 41bp 0.461756499459751 0.704375868408745 0.055054337 0.13433489 prediction 0.408751736817489 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1257107 chr19:1257108 nonsynonymous SNV 0.202 3 22 hm5C_associated_SNPs_127555 0 0 1 RPS3 POSTAR2 ENCODE chr19:1257083-1257131
64251 chr2 170684455 170684455 1 + C T READ 170684454 + 170684434 170684474 41 GCCCTGCATGTCGCTGTGCGCCGAGTGCTTCCACCAGGGCG GCCCTGCATGTCGCTGTGCGCTGAGTGCTTCCACCAGGGCG < 41bp 0.52125630461817 0.725618556096243 0.37399912 0.2292983 prediction 0.408724502956147 Functional Gain - UBR3 ENSG00000144357 CDS Human protein_coding chr2:170684454 chr2:170684455 synonymous SNV . 0 22 hm5C_associated_SNPs_127561 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:170684451-170684467
64251 chr17 19437339 19437339 1 + C T rs61733934 19437338 + 19437318 19437358 41 GTCGCGCTGCTTGCGGCTGTCCGCCTTCCGAGAAGAGCTGC GTCGCGCTGCTTGCGGCTGTCTGCCTTCCGAGAAGAGCTGC < 41bp 0.558297988138004 0.762659271704564 0.26124242 0.27215752 prediction 0.40872256713312 Functional Gain - SLC47A1 ENSG00000142494 CDS Human protein_coding chr17:19437338 chr17:19437339 synonymous SNV . 0 22 hm5C_associated_SNPs_127562 0 0 4 DDX3X POSTAR2 ENCODE chr17:19437299-19437346
64251 chr18 46389499 46389499 1 + C A rs183804457 46389495 + 46389475 46389515 41 GCCGCGGAACCCCGCTAGTGCGACCACCCTCCCTCCGTCGG GCCGCGGAACCCCGCTAGTGCGACAACCCTCCCTCCGTCGG < 41bp 0.371126011699015 0.704360528558017 0.178325 0.17050841 prediction 0.408721057116035 Functional Gain - CTIF ENSG00000134030 UTR3 Human protein_coding chr18:46389495 chr18:46389499 . . 0 25 hm5C_associated_SNPs_127563 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:46389472-46389511
64251 chr12 113826620 113826620 1 + C T rs367770796 113826619 + 113826599 113826639 41 GAACTGACCCCCTCTCTCCCCCGAGGTGGGTGGGCACCGTG GAACTGACCCCCTCTCTCCCCTGAGGTGGGTGGGCACCGTG < 41bp 0.512291033721383 0.716650209926333 0.4525284 0.39278018 prediction 0.408718352409902 Functional Gain - PLBD2 ENSG00000151176 UTR3 Human protein_coding chr12:113826619 chr12:113826620 . . 0 22 hm5C_associated_SNPs_127564 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:113826599-113826659
64251 chr9 108147762 108147762 1 + T A KIRC 108147758 + 108147738 108147778 41 AGCTGGTAAGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGC AGCTGGTAAGGGAGGCGTCGCTGAATCCAGAGAGCTAAAGC < 41bp 0.362609687882923 0.704358821244001 0.41912526 0.32826176 prediction 0.408717642488003 Functional Gain - SLC44A1 ENSG00000070214 CDS Human protein_coding chr9:108147758 chr9:108147762 nonsynonymous SNV 0.990 0 25 hm5C_associated_SNPs_127565 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:108147732-108147769
64251 chr1 90400075 90400075 1 + C T SKCM 90400074 + 90400054 90400094 41 TGTTCATGCTGTCGGGGGTGCCCGATGCTGTCTTTGACCTC TGTTCATGCTGTCGGGGGTGCTCGATGCTGTCTTTGACCTC < 41bp 0.611977459211084 0.816333338151809 0.231105 0.3440665 prediction 0.408711757881451 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90400074 chr1:90400075 nonsynonymous SNV 0.968 4 22 hm5C_associated_SNPs_127567 0 0 1 LIN28A POSTAR2 GSE39873,GSM980594 chr1:90400060-90400081
64251 chr6 3081292 3081292 1 + T C UCEC 3081290 + 3081270 3081310 41 TGCTACTTACATGGAAAAGGCGTGATACACAAGGACCTGAA TGCTACTTACATGGAAAAGGCGCGATACACAAGGACCTGAA < 41bp 0.524239887343833 0.728586624319355 0.2411201 0.3525619 prediction 0.408693473951045 Functional Gain - RIPK1 ENSG00000137275 CDS Human protein_coding chr6:3081290 chr6:3081292 nonsynonymous SNV 0.995 3 23 hm5C_associated_SNPs_127573 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:3081246-3081296
64251 chr1 36786686 36786686 1 + C T SKCM 36786685 + 36786665 36786705 41 GATGCAGGGGACCCAGAAGTCCCAGACCCCGCGCGTCATCC GATGCAGGGGACCCAGAAGTCTCAGACCCCGCGCGTCATCC < 41bp 0.466054498534859 0.704344924500784 0.20283508 0.19747126 prediction 0.408689849001568 Functional Gain - SH3D21 ENSG00000214193 CDS Human protein_coding chr1:36786685 chr1:36786686 synonymous SNV . 0 22 hm5C_associated_SNPs_127574 0 0 3 GRWD1 POSTAR2 ENCODE chr1:36786659-36786702
64251 chr3 194408006 194408006 1 + A G COAD 194408003 + 194407983 194408023 41 GCGTGGCCGACGCGCGGCTGCCCAAGGTCTTCGCCTGGGTG GCGTGGCCGACGCGCGGCTGCCCGAGGTCTTCGCCTGGGTG < 41bp 0.561770959158126 0.766110482433688 0.31748018 0.6120721 prediction 0.408679046551125 Functional Gain - FAM43A ENSG00000185112 CDS Human protein_coding chr3:194408003 chr3:194408006 nonsynonymous SNV 0.996 3 24 hm5C_associated_SNPs_127577 0 0 1 CPSF4 POSTAR2 GSE37401,GSM917666 chr3:194408006-194408038
64251 chr10 44101908 44101908 1 + C A rs56333360 44101907 + 44101887 44101927 41 TGGTGCGAGCGCTGCACCAGCCCCTGGCTGGTGGTTACTGT TGGTGCGAGCGCTGCACCAGCACCTGGCTGGTGGTTACTGT < 41bp 0.463284102490983 0.704337913197212 0.19940016 0.15777752 prediction 0.408675826394424 Functional Gain - ZNF485 ENSG00000198298 UTR5 Human protein_coding chr10:44101907 chr10:44101908 . . 0 22 hm5C_associated_SNPs_127578 0 0 1 DDX3X POSTAR2 ENCODE chr10:44101899-44101995
64251 chr2 242509580 242509580 1 + C T COAD 242509579 + 242509559 242509599 41 GGTGTCCCTGTATGCGGTGGCCGCGGGGCTGGCCGTGGACT GGTGTCCCTGTATGCGGTGGCTGCGGGGCTGGCCGTGGACT < 41bp 0.463861040401651 0.704318742251365 0.43805623 0.337835 prediction 0.40863748450273 Functional Gain - BOK ENSG00000176720 CDS Human protein_coding chr2:242509579 chr2:242509580 synonymous SNV . 0 22 hm5C_associated_SNPs_127590 0 0 3 DDX3X POSTAR2 ENCODE chr2:242509568-242509600
64251 chr1 82456823 82456823 1 + T A LUSC 82456819 + 82456799 82456839 41 AGGACAAATGCAGCTGGTTACAAGTCTTTAATCATACAGCT AGGACAAATGCAGCTGGTTACAAGACTTTAATCATACAGCT < 41bp 0.41415486387601 0.704314328930134 0.056100488 0.15013656 prediction 0.408628657860269 Functional Gain - ADGRL2 ENSG00000117114 CDS Human protein_coding chr1:82456819 chr1:82456823 nonsynonymous SNV 0.956 4 25 hm5C_associated_SNPs_127593 0 0 8 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr1:82456815-82456842
64251 chr3 15064790 15064790 1 + C T UCEC 15064789 + 15064769 15064809 41 TCAACTGAGAAAATCTATATCCGGAAAGACCTGAGAAGTCC TCAACTGAGAAAATCTATATCTGGAAAGACCTGAGAAGTCC < 41bp 0.639709388427458 0.844021540061458 0.32960504 0.1720964 prediction 0.408624303268001 Functional Gain - NR2C2 ENSG00000177463 CDS Human protein_coding chr3:15064789 chr3:15064790 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_127595 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:15064770-15064825
64251 chr1 109639164 109639164 1 + A G rs570171899 109639161 + 109639141 109639181 41 CCTGGGTGGGTCGTCTTGACCCAAACTCTTGTGTTGTTACA CCTGGGTGGGTCGTCTTGACCCAGACTCTTGTGTTGTTACA < 41bp 0.503455112626381 0.707755569008942 0.16278669 0.12932909 prediction 0.408600912765122 Functional Gain - TMEM167B ENSG00000215717 UTR3 Human protein_coding chr1:109639161 chr1:109639164 . . 0 24 hm5C_associated_SNPs_127602 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:109639122-109639166
64251 chrX 153668786 153668786 1 + C A LUAD 153668785 + 153668765 153668805 41 TTGTACAGTGAGTCCCTGGCCCGGTATGGCAAGAGCCCATA TTGTACAGTGAGTCCCTGGCCAGGTATGGCAAGAGCCCATA < 41bp 0.649142050921389 0.853440662827983 0.03912303 0.8527515 prediction 0.408597223813187 Functional Gain - GDI1 ENSG00000203879 CDS Human protein_coding chrX:153668785 chrX:153668786 synonymous SNV . 0 22 hm5C_associated_SNPs_127604 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chrX:153668755-153668789
64251 chr5 72865483 72865483 1 + C T PRAD 72865482 + 72865462 72865502 41 GATGTGCTAGCAAACTTAATCCGGATCTCTTTATAACAGGT GATGTGCTAGCAAACTTAATCTGGATCTCTTTATAACAGGT < 41bp 0.608648486483907 0.812946664930368 0.55787206 0.6370025 prediction 0.408596356892922 Functional Gain - UTP15 ENSG00000164338 CDS Human protein_coding chr5:72865482 chr5:72865483 nonsynonymous SNV 0.968 0 22 hm5C_associated_SNPs_127606 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr5:72865429-72865492
64251 chr8 21890687 21890687 1 + T G UCEC 21890683 + 21890663 21890703 41 TTTCTCCCCCAGTTACTTTCCAGCTCCGGGCTGGCTCAGGA TTTCTCCCCCAGTTACTTTCCAGCGCCGGGCTGGCTCAGGA < 41bp 0.53771332820746 0.742007307754084 0.048546135 0.20005888 prediction 0.408587959093249 Functional Gain - NPM2 ENSG00000158806 CDS Human protein_coding chr8:21890683 chr8:21890687 nonsynonymous SNV 0.966 4 25 hm5C_associated_SNPs_127608 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr8:21890685-21890713
64251 chr8 128752816 128752816 1 + C G PRAD 128752813 + 128752793 128752833 41 CACACATCAGCACAACTACGCAGCGCCTCCCTCCACTCGGA CACACATCAGCACAACTACGCAGGGCCTCCCTCCACTCGGA < 41bp 0.538681936814986 0.742966195767569 0.20780796 0.93567675 prediction 0.408568517905168 Functional Gain - MYC ENSG00000136997 CDS Human protein_coding chr8:128752813 chr8:128752816 nonsynonymous SNV 0.272 4 24 hm5C_associated_SNPs_127615 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:128752794-128752829
64251 chr4 37836302 37836302 1 + T C rs3752683 37836299 + 37836279 37836319 41 AAGCAGAAAGGCATCGTGATCAGTTTTGACGCCCGAGCTCA AAGCAGAAAGGCATCGTGATCAGCTTTGACGCCCGAGCTCA < 41bp 0.506288574432194 0.710542117973487 0.13019606 0.2710037 prediction 0.408507087082586 Functional Gain - PGM2 ENSG00000169299 CDS Human protein_coding chr4:37836299 chr4:37836302 synonymous SNV . 0 24 hm5C_associated_SNPs_127628 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:37836302-37836303
64251 chr13 115090608 115090608 1 + C T UCEC 115090607 + 115090587 115090627 41 CCACCACTATCCCCAGAGATCCGTAGTCCAGCAGGATCTCC CCACCACTATCCCCAGAGATCTGTAGTCCAGCAGGATCTCC < 41bp 0.454079576046987 0.704250907380008 0.2519894 0.12520558 prediction 0.408501814760015 Functional Gain - CHAMP1 ENSG00000198824 CDS Human protein_coding chr13:115090607 chr13:115090608 nonsynonymous SNV 0.965 3 22 hm5C_associated_SNPs_127629 0 0 1 IGF2BP2 POSTAR2 ENCODE chr13:115090548-115090621
64251 chr19 42728914 42728914 1 + C T SKCM 42728913 + 42728893 42728933 41 GCAGCCAGCTCATCCTCTCCCCTGGGGAGCTCCTGGCCCAC GCAGCCAGCTCATCCTCTCCCTTGGGGAGCTCCTGGCCCAC < 41bp 0.592905087097424 0.797154884521145 0.6364288 0.19829178 prediction 0.408499594847442 Functional Gain - ZNF526 ENSG00000167625 CDS Human protein_coding chr19:42728913 chr19:42728914 nonsynonymous SNV 0.428 1 22 hm5C_associated_SNPs_127630 0 0 3 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:42728889-42728916
64251 chr7 150733677 150733677 1 + A G UCEC 150733674 + 150733654 150733694 41 ATTGGGGGCTCCCTTGTGGCCGGACAGCAGCTGACAGGGGG ATTGGGGGCTCCCTTGTGGCCGGGCAGCAGCTGACAGGGGG < 41bp 0.45421121621124 0.704248795998229 0.23209411 0.50505704 prediction 0.408497591996458 Functional Gain - ABCB8 ENSG00000197150 CDS Human protein_coding chr7:150733674 chr7:150733677 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_127633 0 0 2 SRRM4 POSTAR2 GSE57278,GSM1378374 chr7:150733660-150733680
64251 chr4 5733332 5733332 1 + A G STAD 5733329 + 5733309 5733349 41 CCACCAGCGATGACAGGTTTCTCAGCCGCACCTTCCTCCGG CCACCAGCGATGACAGGTTTCTCGGCCGCACCTTCCTCCGG < 41bp 0.451455575993114 0.704225010375158 0.24580404 0.37367058 prediction 0.408450020750316 Functional Gain - EVC ENSG00000072840 CDS Human protein_coding chr4:5733329 chr4:5733332 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_127641 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:5733317-5733384
64251 chr1 111690380 111690380 1 + A G GBM 111690377 + 111690357 111690397 41 AAGGAAAAGATGTGGAGATTCTCACCCGGAGTCCCCAGTGG AAGGAAAAGATGTGGAGATTCTCGCCCGGAGTCCCCAGTGG < 41bp 0.603543866303471 0.807761283732903 0.13029978 0.26202726 prediction 0.408434834858864 Functional Gain - CEPT1 ENSG00000134255 CDS Human protein_coding chr1:111690377 chr1:111690380 nonsynonymous SNV 0.998 0 24 hm5C_associated_SNPs_127645 0 0 4 EIF3G POSTAR2 GSE65004,GSM1585673 chr1:111690373-111690394
64251 chr4 129783281 129783281 1 + C T LUAD 129783280 + 129783260 129783300 41 CTTCAACAAGCCCCTGATCACCCCAAAGAAAGATGAAGAGG CTTCAACAAGCCCCTGATCACTCCAAAGAAAGATGAAGAGG < 41bp 0.417134395958912 0.704215785822992 0.042282224 0.9580984 prediction 0.408431571645984 Functional Gain - JADE1 ENSG00000077684 CDS Human protein_coding chr4:129783280 chr4:129783281 synonymous SNV . 0 22 hm5C_associated_SNPs_127646 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr4:129783258-129783287
64251 chr15 49574197 49574197 1 + A G UCEC 49574194 + 49574174 49574214 41 ACCTTTCCAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTG ACCTTTCCAGGTGGAACTTGCAGGAATCTGTGCCAAGAGTG < 41bp 0.605134110775956 0.8093420012321 0.36196846 0.8683808 prediction 0.408415780912287 Functional Gain - GALK2 ENSG00000156958 CDS Human protein_coding chr15:49574194 chr15:49574197 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127647 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr15:49574180-49574200
64251 chr7 75615862 75615862 1 + C T rs72557961 75615861 + 75615841 75615881 41 ATCAGCTCTCCTGGCTCCCTCCCGTAGTCTCCTGGGTGTGT ATCAGCTCTCCTGGCTCCCTCTCGTAGTCTCCTGGGTGTGT < 41bp 0.482897842383047 0.704196566255591 0.39378318 0.29485658 prediction 0.408393132511182 Functional Gain - POR ENSG00000127948 UTR3 Human protein_coding chr7:75615861 chr7:75615862 . . 0 22 hm5C_associated_SNPs_127658 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr7:75615810-75615863
64251 chr22 38364339 38364339 1 + T C rs5756866 38364337 + 38364317 38364357 41 CACCTGCCTACCCCTGCCCCCATGGCTCTGTCCCCACTCCT CACCTGCCTACCCCTGCCCCCACGGCTCTGTCCCCACTCCT < 41bp 0.490105459834736 0.70418947960814 0.27787787 0.281757 prediction 0.40837895921628 Functional Gain - POLR2F ENSG00000100142 UTR3 Human protein_coding chr22:38364337 chr22:38364339 . . 0 23 hm5C_associated_SNPs_127659 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr22:38364322-38364362
64251 chr1 153614822 153614822 1 + T C COAD 153614819 + 153614799 153614839 41 AATCGGAGGACGAGGCCTACCCATAATCCAGAGAGGCTTGC AATCGGAGGACGAGGCCTACCCACAATCCAGAGAGGCTTGC < 41bp 0.565998568718177 0.77018462554124 0.08589876 0.11818519 prediction 0.408372113646124 Functional Gain - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153614819 chr1:153614822 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_127663 0 0 19 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:153614774-153614853
64251 chr19 54377623 54377623 1 + C G LGG 54377620 + 54377600 54377640 41 CGCTCGAGAGATGTAAGCTGCAGCCGCAGCCATGCCTACTA CGCTCGAGAGATGTAAGCTGCAGGCGCAGCCATGCCTACTA < 41bp 0.530352286029948 0.734535997762127 0.3067577 0.89233 prediction 0.408367423464357 Functional Gain - MYADM ENSG00000179820 CDS Human protein_coding chr19:54377620 chr19:54377623 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_127666 0 0 2 SND1 POSTAR2 ENCODE chr19:54377621-54377632
64251 chr6 116600806 116600806 1 - G T rs199823906 116600807 - 116600787 116600827 41 CCGTCGCGCTCCCGCCTCCACCGCCTTCAGAGGAGGGGGGC CCGTCGCGCTCCCGCCTCCACAGCCTTCAGAGGAGGGGGGC < 41bp 0.618293785629051 0.822477008903533 0.14173687 0.09985173 prediction 0.408366446548964 Functional Gain - TSPYL1 ENSG00000189241 CDS Human protein_coding chr6:116600807 chr6:116600806 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_127667 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:116600784-116600822
64251 chr16 14758878 14758878 1 + A G COAD 14758875 + 14758855 14758895 41 ATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTC ATCATCAATGCTATGTTACTCTCGGTTCTGGAATTATTCTC < 41bp 0.595665829242108 0.79984876601014 0.08340204 0.17214763 prediction 0.408365873536063 Functional Gain - BFAR ENSG00000103429 CDS Human protein_coding chr16:14758875 chr16:14758878 synonymous SNV . 0 24 hm5C_associated_SNPs_127668 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr16:14758799-14758878
64251 chr6 130415458 130415458 1 + C A rs141824361 130415457 + 130415437 130415477 41 AACATGGTGGATGCTCAACCCCGGGATGTAAAGGGATTGGC AACATGGTGGATGCTCAACCCAGGGATGTAAAGGGATTGGC < 41bp 0.643879014054445 0.84805393625657 0.13691345 0.45763358 prediction 0.408349844404251 Functional Gain - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130415457 chr6:130415458 nonsynonymous SNV 0.097 2 22 hm5C_associated_SNPs_127671 0 0 1 SF3B1 POSTAR2 ENCODE chr6:130415418-130415460
64251 chr3 130699469 130699469 1 + A G OV 130699466 + 130699446 130699486 41 TCCAAAACTTCCCAGTCAGTCTCAGGAGAAGAAATAGATGC TCCAAAACTTCCCAGTCAGTCTCGGGAGAAGAAATAGATGC < 41bp 0.539616612225911 0.743784114925976 0.008488387 0.0129727125 prediction 0.408335005400131 Functional Gain - ATP2C1 ENSG00000017260 CDS Human protein_coding chr3:130699466 chr3:130699469 synonymous SNV . 0 24 hm5C_associated_SNPs_127677 0 0 1 U2AF2 POSTAR2 ENCODE chr3:130699414-130699478
64251 chr19 12865526 12865526 1 + C T rs36032297 12865525 + 12865505 12865545 41 GCGCTACGCAGGGCTCTCGGCCGTGCTCATCCTGCGCTCCG GCGCTACGCAGGGCTCTCGGCTGTGCTCATCCTGCGCTCCG < 41bp 0.470507553305742 0.704160911713039 0.42793152 0.22354609 prediction 0.408321823426079 Functional Gain - BEST2 ENSG00000039987 CDS Human protein_coding chr19:12865525 chr19:12865526 synonymous SNV . 0 22 hm5C_associated_SNPs_127681 0 0 1 EIF3D POSTAR2 GSE65004,GSM1585672 chr19:12865518-12865537
64251 chr7 100773825 100773825 1 + T A STAD 100773823 + 100773803 100773843 41 GATCTGAAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAG GATCTGAAGCTGGTCCAGGGCTACATGCCCCACTTCTTCAG < 41bp 0.493852573977862 0.704160473301893 0.103446156 0.33767956 prediction 0.408320946603786 Functional Gain - SERPINE1 ENSG00000106366 CDS Human protein_coding chr7:100773823 chr7:100773825 nonsynonymous SNV 0.999 1 23 hm5C_associated_SNPs_127682 0 0 2 SND1 POSTAR2 ENCODE chr7:100773806-100773826
64251 chr12 124241420 124241420 1 + C A OV 124241416 + 124241396 124241436 41 CGTGGGCCTCCGCGTTGACACCACCTATGGCGTCTTGCTAC CGTGGGCCTCCGCGTTGACACCACATATGGCGTCTTGCTAC < 41bp 0.282289575384518 0.704158101077735 0.10560581 0.24007621 prediction 0.408316202155469 Functional Gain - ATP6V0A2 ENSG00000185344 CDS Human protein_coding chr12:124241416 chr12:124241420 synonymous SNV . 0 25 hm5C_associated_SNPs_127684 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr12:124241420-124241421
64251 chr19 42796833 42796833 1 + T C rs142078348 42796830 + 42796810 42796850 41 CCTGTCATAACAGCATTTTACTCTGGCAGCCCTGCACCCAC CCTGTCATAACAGCATTTTACTCCGGCAGCCCTGCACCCAC < 41bp 0.53260605860701 0.73675288554284 0.22912037 0.31693587 prediction 0.40829365387166 Functional Gain - CIC ENSG00000079432 CDS Human protein_coding chr19:42796830 chr19:42796833 synonymous SNV . 0 24 hm5C_associated_SNPs_127692 0 0 15 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr19:42796808-42796845
64251 chr2 11706619 11706619 1 + C T UCEC 11706618 + 11706598 11706638 41 CCTCCTAGGGTTTTGCCAGGCCGGGAAGGACCTGCGCCTTG CCTCCTAGGGTTTTGCCAGGCTGGGAAGGACCTGCGCCTTG < 41bp 0.58297120603679 0.787113913940075 0.8848788 0.8770354 prediction 0.408285415806571 Functional Gain - GREB1 ENSG00000196208 CDS Human protein_coding chr2:11706618 chr2:11706619 synonymous SNV . 0 22 hm5C_associated_SNPs_127693 0 0 3 BUD13 POSTAR2 ENCODE chr2:11706604-11706656
64251 chr19 11725659 11725659 1 + C T CESC 11725658 + 11725638 11725678 41 TTAGGAAAACAATGGGAAGACCAGAACATTGAAGACCCATT TTAGGAAAACAATGGGAAGACTAGAACATTGAAGACCCATT < 41bp 0.472265582479826 0.704137898762683 0.17090893 0.2992121 prediction 0.408275797525365 Functional Gain - ZNF627 ENSG00000198551 CDS Human protein_coding chr19:11725658 chr19:11725659 stopgain 0.078 0 22 hm5C_associated_SNPs_127696 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:11725642-11725668
64251 chr2 176957876 176957876 1 + C A LUSC 176957872 + 176957852 176957892 41 GACCTCTGAGCGCACGGGCTCTTCCTCGTCGTCGTCCTCTT GACCTCTGAGCGCACGGGCTCTTCATCGTCGTCGTCCTCTT < 41bp 0.293612696463173 0.70412864081773 0.008256197 0.049642205 prediction 0.40825728163546 Functional Gain - HOXD13 ENSG00000128714 CDS Human protein_coding chr2:176957872 chr2:176957876 synonymous SNV . 0 25 hm5C_associated_SNPs_127698 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr2:176957840-176957880
64251 chr12 57908595 57908595 1 + T G ACC 57908593 + 57908573 57908613 41 CGCCTGCTGGCCCATGTCACCCTGGAGCTCCAGCACTATCA CGCCTGCTGGCCCATGTCACCCGGGAGCTCCAGCACTATCA < 41bp 0.336830756893606 0.70412382414993 0.096886516 0.9229134 prediction 0.40824764829986 Functional Gain - MARS ENSG00000166986 CDS Human protein_coding chr12:57908593 chr12:57908595 nonsynonymous SNV 0.844 0 23 hm5C_associated_SNPs_127703 0 0 12 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:57908547-57908604
64251 chr17 46133882 46133882 1 + C T STAD 46133881 + 46133861 46133901 41 AGATGGAGGCGAGCAGGACACCTGGGCAGGCGAGGGCGCGG AGATGGAGGCGAGCAGGACACTTGGGCAGGCGAGGGCGCGG < 41bp 0.624394667179004 0.828512979448605 0.37042993 0.6786955 prediction 0.408236624539202 Functional Gain - NFE2L1 ENSG00000082641 CDS Human protein_coding chr17:46133881 chr17:46133882 synonymous SNV . 0 22 hm5C_associated_SNPs_127706 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:46133784-46133960
64251 chr20 1145057 1145057 1 + C T SKCM 1145056 + 1145036 1145076 41 GCCTCCCGAACCGACTTCCTCCAGGCGCTGTGCCCCCAGGA GCCTCCCGAACCGACTTCCTCTAGGCGCTGTGCCCCCAGGA < 41bp 0.638862920716453 0.842976617284731 0.94726884 0.87005097 prediction 0.408227393136555 Functional Gain - PSMF1 ENSG00000125818 CDS Human protein_coding chr20:1145056 chr20:1145057 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_127707 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:1145033-1145063
64251 chr14 60582090 60582090 1 + C T COAD 60582089 + 60582069 60582109 41 TTTTCCGAAATCCCTTTTATCCGAAGGATGTGCAAACTGTG TTTTCCGAAATCCCTTTTATCTGAAGGATGTGCAAACTGTG < 41bp 0.451799546861593 0.704093359486352 0.86221945 0.3267231 prediction 0.408186718972703 Functional Gain - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60582089 chr14:60582090 nonsynonymous SNV 0.961 3 22 hm5C_associated_SNPs_127710 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:60582068-60582111
64251 chr12 6634817 6634817 1 + C T rs71579347 6634816 + 6634796 6634836 41 GCTGCTGTGGGAGCGGGCCACCGAGAAGGTCGCCTGCTGTC GCTGCTGTGGGAGCGGGCCACTGAGAAGGTCGCCTGCTGTC < 41bp 0.449161626788248 0.704092772586793 0.7720191 0.888669 prediction 0.408185545173586 Functional Gain - NCAPD2 ENSG00000010292 CDS Human protein_coding chr12:6634816 chr12:6634817 synonymous SNV . 0 22 hm5C_associated_SNPs_127711 0 0 6 FMR1 POSTAR2 ENCODE chr12:6634789-6634847
64251 chr1 40758147 40758147 1 + C T LUAD 40758146 + 40758126 40758166 41 TTTTGCCTAACAGTCCTAAGCCGCAGATTTGAGTTTCAAGC TTTTGCCTAACAGTCCTAAGCTGCAGATTTGAGTTTCAAGC < 41bp 0.600150447262958 0.804232637688709 0.13938236 0.073881984 prediction 0.408164380851502 Functional Gain - ZMPSTE24 ENSG00000084073 CDS Human protein_coding chr1:40758146 chr1:40758147 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_127717 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:40758120-40758180
64251 chr16 29833313 29833313 1 + C A rs3178910 29833312 + 29833292 29833332 41 ATCCCAGTACTTTGGGAGGCCCGAATGGGAGGATGGCTTGA ATCCCAGTACTTTGGGAGGCCAGAATGGGAGGATGGCTTGA < 41bp 0.461313910432364 0.704080145330251 0.79677784 0.9032637 prediction 0.408160290660503 Functional Gain - PAGR1 ENSG00000013364;ENSG00000185928 intronic Human other chr16:29833312 chr16:29833313 . . 0 22 hm5C_associated_SNPs_127718 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:29833298-29833326
64251 chr3 142840944 142840944 1 + T A LUAD 142840940 + 142840920 142840960 41 TGGTGGTGCGGTACGAGGACCTGGTGGGAGACCCCGTCAAG TGGTGGTGCGGTACGAGGACCTGGAGGGAGACCCCGTCAAG < 41bp 0.695125497886959 0.899200477564322 0.3797813 0.5088072 prediction 0.408149959354725 Functional Gain - CHST2 ENSG00000175040 CDS Human protein_coding chr3:142840940 chr3:142840944 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_127721 0 0 3 FMR1 POSTAR2 ENCODE chr3:142840884-142840980
64251 chr21 40768841 40768841 1 + T C rs117922305 40768838 + 40768818 40768858 41 TTAGTCTGTAACAAAGTTGTCGCTATTGTGCTTCATCCGTT TTAGTCTGTAACAAAGTTGTCGCCATTGTGCTTCATCCGTT < 41bp 0.540720072970057 0.744791014527439 0.045996815 0.393864 prediction 0.408141883114763 Functional Gain - WRB ENSG00000182093 CDS Human protein_coding chr21:40768838 chr21:40768841 synonymous SNV . 0 24 hm5C_associated_SNPs_127722 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr21:40768774-40768861
64251 chrX 16838317 16838317 1 + T G STAD 16838314 + 16838294 16838334 41 AGTTTTATTACTGATGCAAGCCCTAAACACCCTTTCAACCC AGTTTTATTACTGATGCAAGCCCGAAACACCCTTTCAACCC < 41bp 0.319748101113746 0.704065742997899 0.06991926 0.096612215 prediction 0.408131485995799 Functional Gain - TXLNG ENSG00000086712 CDS Human protein_coding chrX:16838314 chrX:16838317 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127726 0 0 14 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:16838296-16838337
64251 chr12 98993848 98993848 1 + C A PRAD 98993847 + 98993827 98993867 41 AAGTTTGTGGTTCCTAAGCCCCGCAGTGAATGTTCAAAGCC AAGTTTGTGGTTCCTAAGCCCAGCAGTGAATGTTCAAAGCC < 41bp 0.627596868819295 0.831659916961543 0.31025803 0.44269836 prediction 0.408126096284497 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98993847 chr12:98993848 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_127728 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:98993737-98993869
64251 chr3 30715667 30715667 1 + T C STAD 30715665 + 30715645 30715685 41 AATTTGGAGAATGTTGAGTCCTTCAAGCAGACCGATGTCTA AATTTGGAGAATGTTGAGTCCTCCAAGCAGACCGATGTCTA < 41bp 0.382075789949077 0.704050233216606 0.25995392 0.95853007 prediction 0.408100466433212 Functional Gain - TGFBR2 ENSG00000163513 CDS Human protein_coding chr3:30715665 chr3:30715667 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_127734 0 0 2 GRWD1 POSTAR2 ENCODE chr3:30715657-30715753
64251 chr12 120114475 120114475 1 + C T PAAD 120114474 + 120114454 120114494 41 GAACAAGGACACGGGGATTTCCGTAAGTATGTGGGCATCTG GAACAAGGACACGGGGATTTCTGTAAGTATGTGGGCATCTG < 41bp 0.630720522117442 0.834762593517461 0.19263384 0.16162097 prediction 0.408084142800039 Functional Gain - PRKAB1 ENSG00000111725 CDS Human protein_coding chr12:120114474 chr12:120114475 synonymous SNV . 0 22 hm5C_associated_SNPs_127736 0 0 4 LIN28B POSTAR2 GSE44616,GSM1087851 chr12:120114466-120114484
64251 chr19 44681538 44681538 1 + T G rs528299115 44681536 + 44681516 44681556 41 TGTGGGGAGTGTGGTAAGTACTTCAGTCAGGCCTCAAGTCT TGTGGGGAGTGTGGTAAGTACTGCAGTCAGGCCTCAAGTCT < 41bp 0.689333975163591 0.893370371478038 0.054831088 0.10225427 prediction 0.408072792628894 Functional Gain - ZNF226 ENSG00000167380 CDS Human protein_coding chr19:44681536 chr19:44681538 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_127740 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:44681510-44681543
64251 chr9 707064 707064 1 + A G rs147254720 707061 + 707041 707081 41 GGGGGTGGTGTCACTGCAGCCGGAGGGAGACCTCGCCGGTG GGGGGTGGTGTCACTGCAGCCGGGGGGAGACCTCGCCGGTG < 41bp 0.486476491019557 0.704027840463225 0.92536056 0.9391129 prediction 0.408055680926449 Functional Gain - KANK1 ENSG00000107104 UTR5 Human protein_coding chr9:707061 chr9:707064 . . 0 24 hm5C_associated_SNPs_127742 0 0 1 EIF3H POSTAR2 ENCODE chr9:707034-707086
64251 chr6 44116270 44116270 1 + T C STAD 44116268 + 44116248 44116288 41 AGCATCCTGAAGGACTTCAACGTGTGTAAATGCCAGGGCTG AGCATCCTGAAGGACTTCAACGCGTGTAAATGCCAGGGCTG < 41bp 0.44064867958581 0.704025249464161 0.41953695 0.3969909 prediction 0.408050498928322 Functional Gain - TMEM63B ENSG00000137216 CDS Human protein_coding chr6:44116268 chr6:44116270 nonsynonymous SNV 1.000 1 23 hm5C_associated_SNPs_127745 0 0 6 BUD13 POSTAR2 ENCODE chr6:44116249-44116304
64251 chr14 93652910 93652910 1 + T C SKCM 93652907 + 93652887 93652927 41 TACAAGAGCTGATCCCAAAACAGTGGGCTACTGTATCATCC TACAAGAGCTGATCCCAAAACAGCGGGCTACTGTATCATCC < 41bp 0.548262332418519 0.752287068517277 0.27631712 0.43182027 prediction 0.408049472197515 Functional Gain - TMEM251 ENSG00000153485 CDS Human protein_coding chr14:93652907 chr14:93652910 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_127746 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:93652854-93652925
64251 chr19 9271773 9271773 1 + T C UCEC 9271770 + 9271750 9271790 41 GCCGCCTGCGGGAAAGTCTTCGGTGACTATTTATCCCGGCG GCCGCCTGCGGGAAAGTCTTCGGCGACTATTTATCCCGGCG < 41bp 0.515282440411095 0.719305855503725 0.4018851 0.5194626 prediction 0.408046830185261 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271770 chr19:9271773 synonymous SNV . 0 24 hm5C_associated_SNPs_127747 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr19:9271772-9271800
64251 chr10 131934654 131934654 1 + C G rs2274218 131934650 + 131934630 131934670 41 GCCCCGCCCACATCCGGCCGCCGGCACTGGATTGCTTCTGT GCCCCGCCCACATCCGGCCGCCGGGACTGGATTGCTTCTGT < 41bp 0.667844358971917 0.871860898133785 0.275559 0.8082477 prediction 0.408033078323736 Functional Gain - GLRX3 ENSG00000108010 upstream Human protein_coding chr10:131934650 chr10:131934654 . . 0 25 hm5C_associated_SNPs_127748 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819210 chr10:131934654-131934655
64251 chr9 35751280 35751280 1 + T G PRAD 35751277 + 35751257 35751297 41 CTCTAGGCCTTCAGGATGTCCGGTTTCCCCAGGATGAGGCT CTCTAGGCCTTCAGGATGTCCGGGTTCCCCAGGATGAGGCT < 41bp 0.294894501213308 0.70401390691119 0.17935997 0.70182604 prediction 0.408027813822381 Functional Gain - RGP1 ENSG00000107185 CDS Human protein_coding chr9:35751277 chr9:35751280 nonsynonymous SNV 0.829 1 24 hm5C_associated_SNPs_127750 0 0 1 BUD13 POSTAR2 ENCODE chr9:35751262-35751310
64251 chr19 34935921 34935921 1 + C T STAD 34935920 + 34935900 34935940 41 TATAGGGGAACCAACGGAAGCCGAAGCCAGAGCTAGAGCAT TATAGGGGAACCAACGGAAGCTGAAGCCAGAGCTAGAGCAT < 41bp 0.456509407516415 0.704012161554334 0.09756434 0.10359529 prediction 0.408024323108668 Functional Gain - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34935920 chr19:34935921 synonymous SNV . 0 22 hm5C_associated_SNPs_127751 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:34935895-34935957
64251 chr19 53058488 53058488 1 + T C UCEC 53058486 + 53058466 53058506 41 ACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTA ACGACTGTGGCAATACCTTCCGCCACTGGTCATCCCTTGTA < 41bp 0.436431522131275 0.70401006299991 0.06889063 0.080299854 prediction 0.40802012599982 Functional Gain - ZNF808 ENSG00000198482 CDS Human protein_coding chr19:53058486 chr19:53058488 synonymous SNV . 0 23 hm5C_associated_SNPs_127753 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr19:53058479-53058504
64251 chr1 28661424 28661424 1 + A G rs370549785 28661421 + 28661401 28661441 41 TCTGATGACATGAAGAACTTCGCAGAACAGCTAAAACCTCT TCTGATGACATGAAGAACTTCGCGGAACAGCTAAAACCTCT < 41bp 0.525419738193564 0.72942864969622 0.6334892 0.44543988 prediction 0.408017823005312 Functional Gain - MED18 ENSG00000130772 CDS Human protein_coding chr1:28661421 chr1:28661424 synonymous SNV . 0 24 hm5C_associated_SNPs_127754 0 0 1 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:28661409-28661430
64251 chr11 46726595 46726595 1 + C T COAD 46726594 + 46726574 46726614 41 TGTGGCAAGGCCTTTGCCCGCCGGCCCTCCCTGCGGCTGCA TGTGGCAAGGCCTTTGCCCGCTGGCCCTCCCTGCGGCTGCA < 41bp 0.473208598388866 0.704003844887895 0.47742867 0.4420037 prediction 0.408007689775789 Functional Gain - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726594 chr11:46726595 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_127757 0 0 5 RBM15 POSTAR2 ENCODE chr11:46726566-46726623
64251 chr9 90296516 90296516 1 + T A COAD 90296512 + 90296492 90296532 41 CACCAACTCCAGCAGGTTCCCACCTTCACCCCTGGCTTCTA CACCAACTCCAGCAGGTTCCCACCATCACCCCTGGCTTCTA < 41bp 0.347185750566814 0.703988803061749 0.04342401 0.04202655 prediction 0.407977606123498 Functional Gain - DAPK1 ENSG00000196730 CDS Human protein_coding chr9:90296512 chr9:90296516 synonymous SNV . 0 25 hm5C_associated_SNPs_127765 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:90296496-90296527
64251 chr15 22833544 22833544 1 + C G SKCM 22833540 + 22833520 22833560 41 GGAACATGGCGCGGCACGGGCCACCGTGGAGTCGGTTGGAC GGAACATGGCGCGGCACGGGCCACGGTGGAGTCGGTTGGAC < 41bp 0.41299523130305 0.703986540627552 0.34365463 0.47575307 prediction 0.407973081255105 Functional Gain - TUBGCP5 ENSG00000153575 CDS Human other chr15:22833540 chr15:22833544 nonsynonymous SNV . 0 25 hm5C_associated_SNPs_127768 0 0 2 DDX3X POSTAR2 ENCODE chr15:22833544-22833662
64251 chr4 170634408 170634408 1 + A G rs1010713 170634405 + 170634385 170634425 41 GAGATCGTGGTGGATATTTTCCGAAAGCTGGGACTGAGGCA GAGATCGTGGTGGATATTTTCCGGAAGCTGGGACTGAGGCA < 41bp 0.595791798182756 0.799761606288491 0.26952332 0.84950256 prediction 0.407939616211471 Functional Gain - CLCN3 ENSG00000109572 CDS Human protein_coding chr4:170634405 chr4:170634408 synonymous SNV . 0 24 hm5C_associated_SNPs_127773 0 0 8 FMR1 POSTAR2 GSE39682,GSM977615 chr4:170634402-170634432
64251 chr1 6680226 6680226 1 + T G HNSC 6680222 + 6680202 6680242 41 CCCCAGGCTCCCAGCGACCCCTGCTCGGGCTGGGACTCCGA CCCCAGGCTCCCAGCGACCCCTGCGCGGGCTGGGACTCCGA < 41bp 0.502446516761581 0.706409108671244 0.057765573 0.107080996 prediction 0.407925183819327 Functional Gain - PHF13 ENSG00000116273 CDS Human protein_coding chr1:6680222 chr1:6680226 nonsynonymous SNV 0.891 0 25 hm5C_associated_SNPs_127777 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr1:6680224-6680250
64251 chr22 39079821 39079821 1 + T C COAD 39079818 + 39079798 39079838 41 CTCAGGAGGAATGCCAGGGGCTCTACCCTCACTTCCTGGAA CTCAGGAGGAATGCCAGGGGCTCCACCCTCACTTCCTGGAA < 41bp 0.573153789338377 0.777116328942681 0.2395601 0.17919406 prediction 0.407925079208609 Functional Gain - TOMM22 ENSG00000100216 CDS Human protein_coding chr22:39079818 chr22:39079821 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_127778 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr22:39079787-39079922
64251 chr15 83655082 83655082 1 + C G rs112694444 83655078 + 83655058 83655098 41 CTGGGCTTCTCAGTGTCTCGCCGGCGGGGTTCGGCCTGAGC CTGGGCTTCTCAGTGTCTCGCCGGGGGGGTTCGGCCTGAGC < 41bp 0.629954142693935 0.833906005115767 0.7855018 0.9196409 prediction 0.407903724843664 Functional Gain - FAM103A1 ENSG00000259805 ncRNA_intronic Human antisense chr15:83655078 chr15:83655082 . . 0 25 hm5C_associated_SNPs_127779 0 0 2 DDX3X POSTAR2 ENCODE chr15:83655041-83655122
64251 chr19 16986961 16986961 1 + C T CESC 16986960 + 16986940 16986980 41 CGCTGGTGGGAACCTGTCCTCCCGCTGCGTCCGCGCTGCTA CGCTGGTGGGAACCTGTCCTCTCGCTGCGTCCGCGCTGCTA < 41bp 0.43810674553057 0.703951127554484 0.3671887 0.7816006 prediction 0.407902255108967 Functional Gain - SIN3B ENSG00000127511 CDS Human protein_coding chr19:16986960 chr19:16986961 synonymous SNV . 0 22 hm5C_associated_SNPs_127782 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:16986928-16986979
64251 chr7 135282129 135282129 1 + T C UCEC 135282127 + 135282107 135282147 41 TATTTTAAGATACTGCAGACCGTGAGGATTCCAAGCCAAAG TATTTTAAGATACTGCAGACCGCGAGGATTCCAAGCCAAAG < 41bp 0.424193821175884 0.70394710463889 0.17131704 0.2687639 prediction 0.40789420927778 Functional Gain - NUP205 ENSG00000155561 CDS Human protein_coding chr7:135282127 chr7:135282129 nonsynonymous SNV 0.766 2 23 hm5C_associated_SNPs_127787 0 0 21 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:135282104-135282143
64251 chr1 173702898 173702898 1 + C T GBM 173702897 + 173702877 173702917 41 ACTGGAATGGATGTAACAAGCCGCTGCACCCTTGGAGACCC ACTGGAATGGATGTAACAAGCTGCTGCACCCTTGGAGACCC < 41bp 0.621317906386253 0.825263824132747 0.4445849 0.23297551 prediction 0.407891835492988 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173702897 chr1:173702898 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_127788 0 0 2 BUD13 POSTAR2 ENCODE chr1:173702842-173702924
64251 chr14 39584053 39584053 1 + C T BRCA 39584052 + 39584032 39584072 41 GGATCGAAGCAGCTCAATGTCCAGATGTTGTGGTAGCTCAA GGATCGAAGCAGCTCAATGTCTAGATGTTGTGGTAGCTCAA < 41bp 0.601157232728213 0.805092373513636 0.86078334 0.14781421 prediction 0.407870281570846 Functional Gain - GEMIN2 ENSG00000092208 CDS Human protein_coding chr14:39584052 chr14:39584053 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_127791 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr14:39584030-39584070
64251 chr17 1630130 1630130 1 + C T rs148644987 1630129 + 1630109 1630149 41 GGGAGGACTTCACGGAAAACCCGGGACAGCTTCCAAATGGA GGGAGGACTTCACGGAAAACCTGGGACAGCTTCCAAATGGA < 41bp 0.485306701015034 0.703920135551007 0.8916421 0.8801775 prediction 0.407840271102013 Functional Gain - WDR81 ENSG00000167716 CDS Human protein_coding chr17:1630129 chr17:1630130 nonsynonymous SNV 0.003 0 22 hm5C_associated_SNPs_127799 1 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr17:1630123-1630147
64251 chr1 11716142 11716142 1 + A G LIHC 11716139 + 11716119 11716159 41 GCCTGCACAGGAACCTCCTGCACAACCCGTGCGCTGAAGGT GCCTGCACAGGAACCTCCTGCACGACCCGTGCGCTGAAGGT < 41bp 0.453265300446395 0.703915062852745 0.05112222 0.09259912 prediction 0.407830125705491 Functional Gain - FBXO44 ENSG00000132879 CDS Human protein_coding chr1:11716139 chr1:11716142 nonsynonymous SNV 0.988 4 24 hm5C_associated_SNPs_127801 0 0 10 BUD13 POSTAR2 ENCODE chr1:11716075-11716152
64251 chr22 45996254 45996254 1 + T C rs114857363 45996251 + 45996231 45996271 41 GTCCTGAAGCTGGAGATGAACTATGTGGTCGGGGGCGTGGT GTCCTGAAGCTGGAGATGAACTACGTGGTCGGGGGCGTGGT < 41bp 0.563387668296018 0.76729950268102 0.07652563 0.1409038 prediction 0.407823668770004 Functional Gain - FBLN1 ENSG00000077942 CDS Human protein_coding chr22:45996251 chr22:45996254 synonymous SNV . 0 24 hm5C_associated_SNPs_127805 0 0 1 SND1 POSTAR2 ENCODE chr22:45996253-45996283
64251 chr2 74425741 74425741 1 + C G rs112453409 74425737 + 74425717 74425757 41 CCGCGTGGCCCGCGCGCGCGCTTCCCTCCCGGCGCAGTCAC CCGCGTGGCCCGCGCGCGCGCTTCGCTCCCGGCGCAGTCAC < 41bp 0.414603123108118 0.70391010985765 0.1304757 0.21980605 prediction 0.4078202197153 Functional Gain - MTHFD2 ENSG00000065911 UTR5 Human protein_coding chr2:74425737 chr2:74425741 . . 0 25 hm5C_associated_SNPs_127808 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:74425713-74425863
64251 chr8 22462758 22462758 1 + C G rs79550139 22462754 + 22462734 22462774 41 TTCCGGGGAGAGGGCCCACACAGTCTCCTCGCCGGCACCGG TTCCGGGGAGAGGGCCCACACAGTGTCCTCGCCGGCACCGG < 41bp 0.42843478928799 0.703903208797197 0.2564946 0.6247686 prediction 0.407806417594394 Functional Gain - CCAR2 ENSG00000158941 UTR5 Human protein_coding chr8:22462754 chr8:22462758 . . 0 25 hm5C_associated_SNPs_127810 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr8:22462747-22462774
64251 chr19 10934546 10934546 1 + C T COAD 10934545 + 10934525 10934565 41 AGCTGGAAGGCCTCGTTCCTCCGAGCTGGCGTCTACCCCGA AGCTGGAAGGCCTCGTTCCTCTGAGCTGGCGTCTACCCCGA < 41bp 0.606662267393576 0.810552643076399 0.8751712 0.7248966 prediction 0.407780751365647 Functional Gain - DNM2 ENSG00000079805 CDS Human protein_coding chr19:10934545 chr19:10934546 stopgain 0.483 1 22 hm5C_associated_SNPs_127817 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:10934524-10934549
64251 chr16 2551348 2551348 1 + C A rs189378766 2551344 + 2551324 2551364 41 GAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT GAGTACAACGGCAGTGGGAACGTGAAGCTAAGGGTGGGCCT < 41bp 0.328646185866916 0.703884661586509 0.722022 0.8386632 prediction 0.407769323173018 Functional Gain - TBC1D24 ENSG00000162065 UTR3 Human protein_coding chr16:2551344 chr16:2551348 . . 0 25 hm5C_associated_SNPs_127820 1 0 11 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr16:2551347-2551348
64251 chr19 39422990 39422990 1 + C T ESCA 39422989 + 39422969 39423009 41 CCAGGCCCAGCTCTGGTTCCCCGGCTCTGGGCTACCTGCTC CCAGGCCCAGCTCTGGTTCCCTGGCTCTGGGCTACCTGCTC < 41bp 0.55800078600686 0.761874544735788 0.5153977 0.1900276 prediction 0.407747517457854 Functional Gain - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39422989 chr19:39422990 nonsynonymous SNV 0.123 1 22 hm5C_associated_SNPs_127823 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:39422980-39423000
64251 chr5 179234122 179234122 1 + A G rs59066892 179234119 + 179234099 179234139 41 GTGGGCTCGTGCGAGTCGGCCTCAGGTAAGGCTGGAGTGGG GTGGGCTCGTGCGAGTCGGCCTCGGGTAAGGCTGGAGTGGG < 41bp 0.599474079523812 0.803342358139241 0.09935632 0.22284865 prediction 0.407736557230858 Functional Gain - SQSTM1 ENSG00000161011 intronic Human protein_coding chr5:179234119 chr5:179234122 . . 0 24 hm5C_associated_SNPs_127825 0 0 1 DDX3X POSTAR2 ENCODE chr5:179234056-179234130
64251 chr2 172952935 172952935 1 + T C STAD 172952933 + 172952913 172952953 41 CTATATCCCCAGCTACACATCGTGGTACCCTTCAGCGCACC CTATATCCCCAGCTACACATCGCGGTACCCTTCAGCGCACC < 41bp 0.635385898903272 0.83925280405157 0.86758596 0.8417295 prediction 0.407733810296596 Functional Gain - DLX1 ENSG00000144355 CDS Human protein_coding chr2:172952933 chr2:172952935 nonsynonymous SNV 0.995 5 23 hm5C_associated_SNPs_127826 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr2:172952934-172952935
64251 chrX 55249163 55249163 1 + T C SKCM 55249160 + 55249140 55249180 41 ACTCTGCCCACTTTTGATCCCACTAAAGTGCTGGAAGCAGG ACTCTGCCCACTTTTGATCCCACCAAAGTGCTGGAAGCAGG < 41bp 0.474875719359338 0.703865891384152 0.21564129 0.29367077 prediction 0.407731782768305 Functional Gain - PAGE5 ENSG00000158639 CDS Human protein_coding chrX:55249160 chrX:55249163 synonymous SNV . 0 24 hm5C_associated_SNPs_127829 0 0 2 LARP4 POSTAR2 ENCODE chrX:55249142-55249180
64251 chr1 36556897 36556897 1 + C T SKCM 36556896 + 36556876 36556916 41 GGCCAGGGCCCTGGTGCAGTCCCTGCTAGCCAAGGAGGCCT GGCCAGGGCCCTGGTGCAGTCTCTGCTAGCCAAGGAGGCCT < 41bp 0.442690520717148 0.70384767299214 0.11201787 0.118424445 prediction 0.407695345984281 Functional Gain - ADPRHL2 ENSG00000116863 CDS Human protein_coding chr1:36556896 chr1:36556897 synonymous SNV . 0 22 hm5C_associated_SNPs_127833 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:36556887-36556920
64251 chr12 125591784 125591784 1 + C G rs41521044 125591780 + 125591760 125591800 41 CATGTTCTCATCGGGCACCACGGGCGCACCCAAGTGCATGG CATGTTCTCATCGGGCACCACGGGGGCACCCAAGTGCATGG < 41bp 0.677536112762435 0.881383202231626 0.31088704 0.7105489 prediction 0.407694178938382 Functional Gain - AACS ENSG00000081760 CDS Human protein_coding chr12:125591780 chr12:125591784 synonymous SNV . 0 25 hm5C_associated_SNPs_127834 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:125591751-125591789
64251 chr17 1673199 1673199 1 + C G LUSC 1673195 + 1673175 1673215 41 GCTGGTGGAGGAGGAGGATCCTTTCTTCAAAGTCCCCGTGA GCTGGTGGAGGAGGAGGATCCTTTGTTCAAAGTCCCCGTGA < 41bp 0.406077638970576 0.703841069869905 0.13136378 0.13522154 prediction 0.407682139739811 Functional Gain - SERPINF1 ENSG00000132386 CDS Human protein_coding chr17:1673195 chr17:1673199 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_127838 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr17:1673191-1673212
64251 chr5 176304268 176304268 1 + C T UCEC 176304267 + 176304247 176304287 41 TCTACCTCACGCTGCACAAGCCGGAAGACGTGAGGTGTGGC TCTACCTCACGCTGCACAAGCTGGAAGACGTGAGGTGTGGC < 41bp 0.632738406164329 0.836578342667068 0.30409867 0.33080325 prediction 0.407679873005478 Functional Gain - UNC5A ENSG00000113763 CDS Human protein_coding chr5:176304267 chr5:176304268 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_127839 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr5:176304240-176304270
64251 chr10 104837141 104837141 1 + C T rs73353833 104837140 + 104837120 104837160 41 GAGAGATGTGAAGTTGGCAGCCGGGGCATGGCGTTCAAGAT GAGAGATGTGAAGTTGGCAGCTGGGGCATGGCGTTCAAGAT < 41bp 0.551439013902174 0.755263917205876 0.8756539 0.46316713 prediction 0.407649806607403 Functional Gain - CNNM2 ENSG00000148842 UTR3 Human protein_coding chr10:104837140 chr10:104837141 . . 0 22 hm5C_associated_SNPs_127845 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:104837124-104837152
64251 chr11 65408468 65408468 1 + C T GBM 65408467 + 65408447 65408487 41 TCCACAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGC TCCACAGATGACCTCTTTGCCTGCAAGCTGCGCCAGCCAGC < 41bp 0.625109472130551 0.828929754410615 0.101388484 0.11726916 prediction 0.407640564560129 Functional Gain - SIPA1 ENSG00000213445 CDS Human protein_coding chr11:65408467 chr11:65408468 nonsynonymous SNV 0.965 3 22 hm5C_associated_SNPs_127846 0 0 3 GEMIN5 POSTAR2 ENCODE chr11:65408466-65408498
64251 chr6 37448645 37448645 1 + A G rs187270536 37448642 + 37448622 37448662 41 GTATGGAGTTGTAGAGCCATCCTAGGTGCCATCCCCTTTTG GTATGGAGTTGTAGAGCCATCCTGGGTGCCATCCCCTTTTG < 41bp 0.455372206609091 0.703816813331641 0.0625191 0.6235131 prediction 0.407633626663282 Functional Gain - CMTR1 ENSG00000137200 UTR3 Human protein_coding chr6:37448642 chr6:37448645 . . 0 24 hm5C_associated_SNPs_127847 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350197 chr6:37448581-37448658
64251 chr2 203630272 203630272 1 + A G UCEC 203630269 + 203630249 203630289 41 CTTTCTGCCTCGTCAGCATCCTCAAGCCACTCCTTCCTACC CTTTCTGCCTCGTCAGCATCCTCGAGCCACTCCTTCCTACC < 41bp 0.585829371013386 0.789641239822086 0.080932885 0.2160317 prediction 0.407623737617401 Functional Gain - FAM117B ENSG00000138439 CDS Human protein_coding chr2:203630269 chr2:203630272 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_127848 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:203630248-203630363
64251 chr1 173726131 173726131 1 + T C STAD 173726128 + 173726108 173726148 41 TCCCCAGTTGGTGGTTGGTGCAGTGGAGATGCCATTTCCAG TCCCCAGTTGGTGGTTGGTGCAGCGGAGATGCCATTTCCAG < 41bp 0.491688945120055 0.703803783505682 0.27591047 0.2454758 prediction 0.407607567011364 Functional Gain - KLHL20 ENSG00000076321 CDS Human protein_coding chr1:173726128 chr1:173726131 synonymous SNV . 0 24 hm5C_associated_SNPs_127852 0 0 1 SF3B4 POSTAR2 ENCODE chr1:173726063-173726152
64251 chr17 73699916 73699916 1 + A G STAD 73699913 + 73699893 73699933 41 GTTTGATCCCCATGGCTGGTCTGAGGACTCCTACTATGAGG GTTTGATCCCCATGGCTGGTCTGGGGACTCCTACTATGAGG < 41bp 0.628126470284184 0.831930156008985 0.017440766 0.17375153 prediction 0.407607371449602 Functional Gain - SAP30BP ENSG00000161526 CDS Human protein_coding chr17:73699913 chr17:73699916 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_127853 0 0 13 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:73699882-73699935
64251 chr15 91492021 91492021 1 + C T SKCM 91492020 + 91492000 91492040 41 GCATGTGCCCGAGCAGCACCCCAAGGTGAGGGGCCGCCAGA GCATGTGCCCGAGCAGCACCCTAAGGTGAGGGGCCGCCAGA < 41bp 0.451936414620032 0.703800310427366 0.1525887 0.17991066 prediction 0.407600620854732 Functional Gain - UNC45A ENSG00000140553 CDS Human protein_coding chr15:91492020 chr15:91492021 synonymous SNV . 0 22 hm5C_associated_SNPs_127854 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:91491998-91492024
64251 chr10 81113705 81113705 1 + C T rs2230225 81113704 + 81113684 81113724 41 AAACGATACGTGTGCCCACTCCACTGTCACAGTGTGCCTGA AAACGATACGTGTGCCCACTCTACTGTCACAGTGTGCCTGA < 41bp 0.483105957612705 0.703799938305697 0.084890306 0.13496405 prediction 0.407599876611394 Functional Gain - PPIF ENSG00000108179 UTR3 Human protein_coding chr10:81113704 chr10:81113705 . . 0 22 hm5C_associated_SNPs_127856 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:81113646-81113742
64251 chr12 7283255 7283255 1 + T A rs202132447 7283251 + 7283231 7283271 41 CCCCACGCCGCACCATGACCCTCCTGCTGCTGCCCCTTCTG CCCCACGCCGCACCATGACCCTCCAGCTGCTGCCCCTTCTG < 41bp 0.370229608916689 0.703794698488523 0.28134447 0.9484621 prediction 0.407589396977047 Functional Gain - CLSTN3 ENSG00000139182 CDS Human protein_coding chr12:7283251 chr12:7283255 nonsynonymous SNV 0.975 1 25 hm5C_associated_SNPs_127857 0 0 3 DDX3X POSTAR2 ENCODE chr12:7283087-7283275
64251 chr5 76359013 76359013 1 + C T SKCM 76359012 + 76358992 76359032 41 AGCGGTTTACTGAAAACTTCCCAGAAACTAAGCCTCAAAAA AGCGGTTTACTGAAAACTTCCTAGAAACTAAGCCTCAAAAA < 41bp 0.588875426756858 0.792669291382064 0.07773858 0.11462304 prediction 0.407587729250411 Functional Gain - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76359012 chr5:76359013 nonsynonymous SNV 0.967 0 22 hm5C_associated_SNPs_127858 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:76358985-76359018
64251 chr2 10184408 10184408 1 + C G rs116412095 10184404 + 10184384 10184424 41 ACGACGGGAGGCGGGAGCGCCGCACTGCCTTGGAGGCGGGG ACGACGGGAGGCGGGAGCGCCGCAGTGCCTTGGAGGCGGGG < 41bp 0.42416840965818 0.703792691475986 0.2935059 0.815094 prediction 0.407585382951971 Functional Gain - KLF11 ENSG00000172059 UTR5 Human protein_coding chr2:10184404 chr2:10184408 . . 0 25 hm5C_associated_SNPs_127859 0 0 7 AKAP8L POSTAR2 ENCODE chr2:10184359-10184438
64251 chr5 173315774 173315774 1 + C A rs145803277 173315773 + 173315753 173315793 41 GGTCCCATGAGGGAAAAAAACCCCGGAGCCGCAGAGAGGGG GGTCCCATGAGGGAAAAAAACACCGGAGCCGCAGAGAGGGG < 41bp 0.475224166230049 0.703787208881812 0.42951828 0.43868566 prediction 0.407574417763624 Functional Gain - CPEB4 ENSG00000113742 UTR5 Human protein_coding chr5:173315773 chr5:173315774 . . 0 22 hm5C_associated_SNPs_127862 0 0 1 SLTM POSTAR2 ENCODE chr5:173315724-173315805
64251 chr1 90180350 90180350 1 + C A UCEC 90180346 + 90180326 90180366 41 ACTCTGAAGATTGGAAAAAACAGCCTATCTGTACTTTCACC ACTCTGAAGATTGGAAAAAACAGCATATCTGTACTTTCACC < 41bp 0.316351618703393 0.703784758227814 0.18630576 0.1244109 prediction 0.407569516455629 Functional Gain - LRRC8C ENSG00000171488 CDS Human protein_coding chr1:90180346 chr1:90180350 nonsynonymous SNV 0.980 1 25 hm5C_associated_SNPs_127863 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:90180339-90180367
64251 chrY 2803621 2803621 1 + C T rs569597772 2803620 + 2803600 2803640 41 CGCTCGGCGCCGAACAGGCCCCGAGGAGGCCGCAGTTAGGC CGCTCGGCGCCGAACAGGCCCTGAGGAGGCCGCAGTTAGGC < 41bp 0.497441365292032 0.703780623087947 0.13603127 0.08702481 prediction 0.407561246175895 Functional Gain - ZFY ENSG00000067646 UTR5 Human protein_coding chrY:2803620 chrY:2803621 . . 0 22 hm5C_associated_SNPs_127864 0 0 1 DDX3X POSTAR2 ENCODE chrY:2803541-2803628
64251 chr16 88926377 88926377 1 + C G BLCA 88926373 + 88926353 88926393 41 ACAACCCGGGGGACCGCATCCAGTCCAGGTGGGCCCTACTT ACAACCCGGGGGACCGCATCCAGTGCAGGTGGGCCCTACTT < 41bp 0.399389327623551 0.703778625630885 0.4009235 0.32350487 prediction 0.40755725126177 Functional Gain - TRAPPC2L ENSG00000167515 CDS Human protein_coding chr16:88926373 chr16:88926377 nonsynonymous SNV 0.941 5 25 hm5C_associated_SNPs_127865 0 0 6 IGF2BP2 POSTAR2 ENCODE chr16:88926300-88926381
64251 chr9 96415507 96415507 1 + T C STAD 96415505 + 96415485 96415525 41 TGACATTGTAAAGAAACTGTCATGGGTAGAAAACTACTGGC TGACATTGTAAAGAAACTGTCACGGGTAGAAAACTACTGGC < 41bp 0.420494913575295 0.703778138989806 0.8823632 0.79458606 prediction 0.407556277979612 Functional Gain - PHF2 ENSG00000197724 CDS Human protein_coding chr9:96415505 chr9:96415507 nonsynonymous SNV 0.939 4 23 hm5C_associated_SNPs_127866 0 0 1 FMR1 POSTAR2 GSE39682,GSM977615 chr9:96415501-96415527
64251 chr19 39423057 39423057 1 + C T LUSC 39423056 + 39423036 39423076 41 GCCTGGGGCCCCCCAAGCGGCCGCCTCGGAAGCTGGGCCCC GCCTGGGGCCCCCCAAGCGGCTGCCTCGGAAGCTGGGCCCC < 41bp 0.576072203655904 0.779839594821349 0.27569678 0.4222765 prediction 0.407534782330891 Functional Gain - MRPS12 ENSG00000128626 CDS Human protein_coding chr19:39423056 chr19:39423057 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_127869 0 0 4 DDX3X POSTAR2 ENCODE chr19:39423004-39423069
64251 chr1 32646026 32646026 1 + C A COAD 32646025 + 32646005 32646045 41 CAGGACAACCGGAAGCAGGACCCGAGGGAGCCCAGGAGCGG CAGGACAACCGGAAGCAGGACACGAGGGAGCCCAGGAGCGG < 41bp 0.636497617076168 0.84025883998109 0.24030131 0.33920932 prediction 0.407522445809844 Functional Gain - TXLNA ENSG00000084652 CDS Human protein_coding chr1:32646025 chr1:32646026 nonsynonymous SNV 0.683 1 22 hm5C_associated_SNPs_127871 0 0 12 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:32645980-32646040
64251 chr16 88873790 88873790 1 + C A rs3218730 88873786 + 88873766 88873806 41 AGAACGGCTGCCTGAGCTGGCCCGCGTGCTGCGGAGCGTCT AGAACGGCTGCCTGAGCTGGCCCGAGTGCTGCGGAGCGTCT < 41bp 0.298980557146001 0.703760607926575 0.22927466 0.20809075 prediction 0.40752121585315 Functional Gain - CDT1 ENSG00000167513 CDS Human protein_coding chr16:88873786 chr16:88873790 synonymous SNV . 0 25 hm5C_associated_SNPs_127872 0 0 3 METAP2 POSTAR2 ENCODE chr16:88873779-88873808
64251 chr2 28637357 28637357 1 + T C rs186143743 28637355 + 28637335 28637375 41 TTGGGCAGTTGGGTTTCTGGCTTGAGATGAATCCAAGCAGC TTGGGCAGTTGGGTTTCTGGCTCGAGATGAATCCAAGCAGC < 41bp 0.547570874920139 0.751303000793648 0.43411487 0.34442094 prediction 0.407464251747018 Functional Gain - FOSL2 ENSG00000075426 UTR3 Human protein_coding chr2:28637355 chr2:28637357 . . 0 23 hm5C_associated_SNPs_127885 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr2:28637333-28637360
64251 chr11 63764986 63764986 1 + C T UCS 63764985 + 63764965 63765005 41 CCCAAGGTCTACCTTCTCTACCGGCCTGGACACTACGATAT CCCAAGGTCTACCTTCTCTACTGGCCTGGACACTACGATAT < 41bp 0.466373847858688 0.703730174502704 0.08487296 0.036089063 prediction 0.407460349005408 Functional Gain - OTUB1 ENSG00000167770 CDS Human protein_coding chr11:63764985 chr11:63764986 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_127887 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:63764953-63765001
64251 chr3 112710145 112710145 1 + T C OV 112710143 + 112710123 112710163 41 ATCGACTACGTCAGCTCCGCCGTCCGTATCGACCACGCCCC ATCGACTACGTCAGCTCCGCCGCCCGTATCGACCACGCCCC < 41bp 0.440889225588467 0.703728994662291 0.1603016 0.10928476 prediction 0.407457989324583 Functional Gain - GTPBP8 ENSG00000163607 CDS Human protein_coding chr3:112710143 chr3:112710145 nonsynonymous SNV 0.008 1 23 hm5C_associated_SNPs_127888 0 0 2 YBX3 POSTAR2 ENCODE chr3:112710050-112710177
64251 chr19 33203392 33203392 1 + A G rs187420283 33203389 + 33203369 33203409 41 GCTCACTGCAACCTCCACCTCCCAGGTTCCAGCGATTCTCA GCTCACTGCAACCTCCACCTCCCGGGTTCCAGCGATTCTCA < 41bp 0.624111213678769 0.827818604699522 0.053981602 0.32623217 prediction 0.407414782041507 Functional Gain - NUDT19 ENSG00000213965 UTR3 Human protein_coding chr19:33203389 chr19:33203392 . . 0 24 hm5C_associated_SNPs_127897 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr19:33203391-33203392
64251 chr2 242092919 242092919 1 + C T UCEC 242092918 + 242092898 242092938 41 GCGGGTCGAGTCTGAAGAATCCGGCGATGAAGAAGGGAAGA GCGGGTCGAGTCTGAAGAATCTGGCGATGAAGAAGGGAAGA < 41bp 0.602306298835858 0.806004376590895 0.8531219 0.5222873 prediction 0.407396155510074 Functional Gain - PPP1R7 ENSG00000115685 CDS Human protein_coding chr2:242092918 chr2:242092919 synonymous SNV . 0 22 hm5C_associated_SNPs_127904 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819211 chr2:242092900-242092920
64251 chr16 70191867 70191867 1 + C T rs142499372 70191866 + 70191846 70191886 41 TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTC TGCTGAGTTCCAGAGAGCTGCTGGAATTCCAGGTTTGACTC < 41bp 0.519467723509585 0.723158146568041 0.8989345 0.8195293 prediction 0.407380846116912 Functional Gain - LOC400541 ENSG00000247228 ncRNA_intronic Human antisense chr16:70191866 chr16:70191867 . . 0 22 hm5C_associated_SNPs_127911 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr16:70191860-70191880
64251 chr2 101611991 101611991 1 + C T LUSC 101611990 + 101611970 101612010 41 CCCCAGCCCCTACGTCCTCCCCGAAGGGTCAGCAGTCTGTC CCCCAGCCCCTACGTCCTCCCTGAAGGGTCAGCAGTCTGTC < 41bp 0.622758057242122 0.826448415152533 0.03216788 0.043060273 prediction 0.407380715820822 Functional Gain - NPAS2 ENSG00000170485 CDS Human protein_coding chr2:101611990 chr2:101611991 stopgain 0.354 0 22 hm5C_associated_SNPs_127912 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:101611926-101611992
64251 chr7 99129068 99129068 1 + T C STAD 99129065 + 99129045 99129085 41 ATTCAACATCAAAGAATACACACTGGGGAGAAACCATTCAG ATTCAACATCAAAGAATACACACCGGGGAGAAACCATTCAG < 41bp 0.483379920858132 0.703678277974551 0.011082113 0.017070591 prediction 0.407356555949103 Functional Gain - ZKSCAN5 ENSG00000196652 CDS Human protein_coding chr7:99129065 chr7:99129068 synonymous SNV . 0 24 hm5C_associated_SNPs_127918 0 0 1 ALKBH5 POSTAR2 GSE38201,GSM936506 chr7:99129055-99129083
64251 chr12 118464747 118464747 1 + C A LUSC 118464746 + 118464726 118464766 41 GGAGACTGTCTACACCTGCACCGGGCACCCGCTCAAGTCAG GGAGACTGTCTACACCTGCACAGGGCACCCGCTCAAGTCAG < 41bp 0.638578408499084 0.842254601591135 0.32834172 0.61829257 prediction 0.407352386184102 Functional Gain - RFC5 ENSG00000111445 CDS Human protein_coding chr12:118464746 chr12:118464747 synonymous SNV . 0 22 hm5C_associated_SNPs_127920 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:118464702-118464759
64251 chr1 227153387 227153387 1 + C T UCEC 227153386 + 227153366 227153406 41 CTCCAGCTCAGCGAGCATGCCCGGGAGCGGAAGGTGCCTGT CTCCAGCTCAGCGAGCATGCCTGGGAGCGGAAGGTGCCTGT < 41bp 0.615928502105156 0.819594984858785 0.82452106 0.67132974 prediction 0.407332965507258 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227153386 chr1:227153387 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_127923 0 0 7 BUD13 POSTAR2 ENCODE chr1:227153324-227153436
64251 chr15 58834054 58834054 1 + T C HNSC 58834051 + 58834031 58834071 41 GAAGTCTCAGCCGGCCCAGCCAGTGAACGTGGGGCTGGTGG GAAGTCTCAGCCGGCCCAGCCAGCGAACGTGGGGCTGGTGG < 41bp 0.484210331060505 0.703666285962624 0.9140278 0.8861154 prediction 0.407332571925248 Functional Gain - LIPC ENSG00000166035 CDS Human protein_coding chr15:58834051 chr15:58834054 nonsynonymous SNV 0.911 1 24 hm5C_associated_SNPs_127924 0 0 2 RPS3 POSTAR2 ENCODE chr15:58833998-58834167
64251 chr11 57569394 57569394 1 + C G BLCA 57569390 + 57569370 57569410 41 GCTTGGATTCCGCTTGGATGCTGTCAAGTCCAATGCAGCTG GCTTGGATTCCGCTTGGATGCTGTGAAGTCCAATGCAGCTG < 41bp 0.403049173431657 0.703663661865124 0.028281778 0.11721143 prediction 0.407327323730248 Functional Gain - CTNND1 ENSG00000198561 CDS Human protein_coding chr11:57569390 chr11:57569394 synonymous SNV . 0 25 hm5C_associated_SNPs_127927 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:57569355-57569397
64251 chr16 2015002 2015002 1 + C G rs61749488 2015001 + 2014981 2015021 41 CCGTCCGGCCCCAGCCGCGGCCCGGGAATCTACGTCACCCG CCGTCCGGCCCCAGCCGCGGCGCGGGAATCTACGTCACCCG < 41bp 0.675542219770042 0.879203141168834 0.17326874 0.33658123 prediction 0.407321842797584 Functional Gain - SNHG9 ENSG00000255198 ncRNA_exonic Human lincRNA chr16:2015001 chr16:2015002 . . 0 22 hm5C_associated_SNPs_127930 0 0 1 EIF3B POSTAR2 GSE65004,GSM1585667 chr16:2014988-2015021
64251 chr2 187540353 187540353 1 + T G BRCA 187540351 + 187540331 187540371 41 GGTTGTGGAGTTGCTCAGTGCTTGAAGATTGTCTGCCAAGT GGTTGTGGAGTTGCTCAGTGCTGGAAGATTGTCTGCCAAGT < 41bp 0.37483306173584 0.703639129922239 0.112482876 0.18423432 prediction 0.407278259844477 Functional Gain - ITGAV ENSG00000138448 CDS Human protein_coding chr2:187540351 chr2:187540353 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_127937 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:187540346-187540367
64251 chr17 41002309 41002309 1 + C T SKCM 41002308 + 41002288 41002328 41 ATCAATCCTGTGGCCTGCCTCCCCGACCTGGCAGCCTGTGT ATCAATCCTGTGGCCTGCCTCTCCGACCTGGCAGCCTGTGT < 41bp 0.441196676792042 0.703633707774972 0.019808948 0.13255951 prediction 0.407267415549944 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41002308 chr17:41002309 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_127939 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:41002258-41002348
64251 chr7 112130409 112130409 1 + C G rs112155507 112130408 + 112130388 112130428 41 TTTACAGATATCTGGGAAAGCCTGAGAAATTCATTGAGTTT TTTACAGATATCTGGGAAAGCGTGAGAAATTCATTGAGTTT < 41bp 0.411965607624992 0.703632316679092 0.02617079 0.089125425 prediction 0.407264633358185 Functional Gain - LSMEM1 ENSG00000181016 UTR3 Human protein_coding chr7:112130408 chr7:112130409 . . 0 22 hm5C_associated_SNPs_127940 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:112130392-112130419
64251 chr19 11350513 11350513 1 + T C UCEC 11350511 + 11350491 11350531 41 CTGACAAAGGCCAGGAACAGCCTGGGTCTCTATGGCCGCAC CTGACAAAGGCCAGGAACAGCCCGGGTCTCTATGGCCGCAC < 41bp 0.456866122040868 0.703631590705604 0.119077116 0.2536366 prediction 0.407263181411209 Functional Gain - ANGPTL8 ENSG00000130173 CDS Human protein_coding chr19:11350511 chr19:11350513 nonsynonymous SNV 0.096 3 23 hm5C_associated_SNPs_127941 0 0 1 SND1 POSTAR2 ENCODE chr19:11350499-11350520
64251 chr2 170551049 170551049 1 + A G rs76102705 170551046 + 170551026 170551066 41 TGGGCTTGTGAGTGGGGCTGCCGAGAGGGCAGGCGTGGGGC TGGGCTTGTGAGTGGGGCTGCCGGGAGGGCAGGCGTGGGGC < 41bp 0.614441718387953 0.818072430696539 0.4249562 0.89554685 prediction 0.407261424617172 Functional Gain - PHOSPHO2;PHOSPHO2-KLHL23 ENSG00000144362;ENSG00000213160 UTR5 Human other chr2:170551046 chr2:170551049 . . 0 24 hm5C_associated_SNPs_127942 0 0 7 DDX3X POSTAR2 ENCODE chr2:170551016-170551065
64251 chr11 111896384 111896384 1 + C T LUSC 111896383 + 111896363 111896403 41 GGGCACTGTGCGGCTGGACCCCCAGTTCTGGGGCCACGCCG GGGCACTGTGCGGCTGGACCCTCAGTTCTGGGGCCACGCCG < 41bp 0.574283069920049 0.777910170156794 0.21428898 0.19068524 prediction 0.407254200473491 Functional Gain - DLAT ENSG00000150768 CDS Human protein_coding chr11:111896383 chr11:111896384 nonsynonymous SNV 0.023 0 22 hm5C_associated_SNPs_127945 0 0 3 DHX30 POSTAR2 ENCODE chr11:111896301-111896476
64251 chr11 73103444 73103444 1 + C A SARC 73103443 + 73103423 73103463 41 GGCATCCTGGTGTGCAACCTCCTCAAGCGGAAGGGCTACCA GGCATCCTGGTGTGCAACCTCATCAAGCGGAAGGGCTACCA < 41bp 0.441475877424578 0.703612301786471 0.07955468 0.08373967 prediction 0.407224603572942 Functional Gain - RELT ENSG00000054967 CDS Human protein_coding chr11:73103443 chr11:73103444 nonsynonymous SNV 0.998 5 22 hm5C_associated_SNPs_127949 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:73103389-73103446
64251 chr12 105150939 105150939 1 + C T BRCA 105150938 + 105150918 105150958 41 GCGGCTCATGATGGTCCTGACCGGGCGGGGGAAGTACAGCG GCGGCTCATGATGGTCCTGACTGGGCGGGGGAAGTACAGCG < 41bp 0.591138498455057 0.794739676128165 0.6894835 0.37789592 prediction 0.407202355346217 Functional Gain - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105150938 chr12:105150939 synonymous SNV . 0 22 hm5C_associated_SNPs_127953 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:105150924-105150969
64251 chrX 68836202 68836202 1 + C T UCEC 68836201 + 68836181 68836221 41 AACTCCTGCCTGCAGCAGCGCCGCGGGAGCGAGGGAGCCAG AACTCCTGCCTGCAGCAGCGCTGCGGGAGCGAGGGAGCCAG < 41bp 0.561088348026185 0.764683568162027 0.594792 0.43691275 prediction 0.407190440271684 Functional Gain - EDA ENSG00000158813 CDS Human protein_coding chrX:68836201 chrX:68836202 nonsynonymous SNV 0.715 2 22 hm5C_associated_SNPs_127960 0 0 2 DDX3X POSTAR2 ENCODE chrX:68836148-68836269
64251 chr10 70863692 70863692 1 + T C STAD 70863690 + 70863670 70863710 41 GAGGACTACTCTGGATCAGGCTTCGGCTCCGGCTCCGGCTC GAGGACTACTCTGGATCAGGCTCCGGCTCCGGCTCCGGCTC < 41bp 0.661035082886079 0.864629998044288 0.26538107 0.3630625 prediction 0.407189830316418 Functional Gain - SRGN ENSG00000122862 CDS Human protein_coding chr10:70863690 chr10:70863692 nonsynonymous SNV 0.248 0 23 hm5C_associated_SNPs_127961 0 0 5 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:70863680-70863720
64251 chr19 58989019 58989019 1 + C A UCEC 58989018 + 58988998 58989038 41 CCTCAGATCACAGCCCATGTCCTGAAGCAGGAGGTGCTCCC CCTCAGATCACAGCCCATGTCATGAAGCAGGAGGTGCTCCC < 41bp 0.434851061800328 0.703594766837167 0.32367903 0.45964724 prediction 0.407189533674333 Functional Gain - ZNF446 ENSG00000083838 CDS Human protein_coding chr19:58989018 chr19:58989019 nonsynonymous SNV 0.078 3 22 hm5C_associated_SNPs_127962 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:58989003-58989030
64251 chr11 2417935 2417935 1 + T C rs2229751 2417932 + 2417912 2417952 41 GGCATTGCTGCCATCGTGGTCGCTGTGATCATGGTGAGCGG GGCATTGCTGCCATCGTGGTCGCCGTGATCATGGTGAGCGG < 41bp 0.561737914039539 0.76532862621951 0.086567014 0.1660943 prediction 0.407181424359942 Functional Gain - CD81 ENSG00000110651 CDS Human protein_coding chr11:2417932 chr11:2417935 synonymous SNV . 0 24 hm5C_associated_SNPs_127964 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:2417869-2417936
64251 chr12 112587574 112587574 1 + C A LIHC 112587570 + 112587550 112587590 41 TTTAGGACCAGTGTGACCAACGCCCAGCCACTGCAACCAAC TTTAGGACCAGTGTGACCAACGCCAAGCCACTGCAACCAAC < 41bp 0.263424343501184 0.703586430779007 0.09137204 0.36810416 prediction 0.407172861558013 Functional Gain - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112587570 chr12:112587574 nonsynonymous SNV 0.997 4 25 hm5C_associated_SNPs_127966 0 0 6 BUD13 POSTAR2 ENCODE chr12:112587548-112587594
64251 chr19 1254342 1254342 1 + C G rs575435876 1254341 + 1254321 1254361 41 GGACCCCAGCATAGCCTCCCCCGTGTCCTCGCCCTGCCGGC GGACCCCAGCATAGCCTCCCCGGTGTCCTCGCCCTGCCGGC < 41bp 0.394356504967322 0.703584721910073 0.43944323 0.8824736 prediction 0.407169443820147 Functional Gain - MIDN ENSG00000167470 CDS Human protein_coding chr19:1254341 chr19:1254342 synonymous SNV . 0 22 hm5C_associated_SNPs_127967 0 0 2 FMR1 POSTAR2 ENCODE chr19:1254321-1254360
64251 chr3 58304112 58304112 1 + C T rs1135089 58304111 + 58304091 58304131 41 ATTCAAGAAGTAGGCTGGGCCCGGTGGCTCATGCCTGTAAT ATTCAAGAAGTAGGCTGGGCCTGGTGGCTCATGCCTGTAAT < 41bp 0.502179109699005 0.705753128357768 0.34522212 0.2995117 prediction 0.407148037317526 Functional Gain - HTD2;RPP14 ENSG00000163684 UTR3 Human protein_coding chr3:58304111 chr3:58304112 . . 0 22 hm5C_associated_SNPs_127973 0 0 6 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr3:58304038-58304113
64251 chr10 43882694 43882694 1 - G A UCEC 43882695 - 43882675 43882715 41 GCCAGGGCCCTATGACCGGCCCGGGACTGCCAGGAGGTACA GCCAGGGCCCTATGACCGGCCTGGGACTGCCAGGAGGTACA < 41bp 0.613330474852015 0.816896266723611 0.05763769 0.08578318 prediction 0.407131583743191 Functional Gain - HNRNPF ENSG00000169813 CDS Human protein_coding chr10:43882695 chr10:43882694 synonymous SNV . 0 22 hm5C_associated_SNPs_127976 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714639 chr10:43882603-43882890
64251 chr13 103514655 103514655 1 + C T OV 103514654 + 103514634 103514674 41 GACGAAGGCTCCATATCACCCCGGACTCTTTCAGCCATTAA GACGAAGGCTCCATATCACCCTGGACTCTTTCAGCCATTAA < 41bp 0.613214131710281 0.816777160916015 0.08511484 0.053800017 prediction 0.407126058411469 Functional Gain - BIVM-ERCC5;ERCC5 ENSG00000134899;ENSG00000270181 CDS Human other chr13:103514654 chr13:103514655 nonsynonymous SNV 0.001 3 22 hm5C_associated_SNPs_127978 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:103514641-103514666
64251 chr2 47221572 47221572 1 + C A PRAD 47221568 + 47221548 47221588 41 GCTACTGGAGCCCCCTGTCCCACCCTCTGCCTGAGTTCATG GCTACTGGAGCCCCCTGTCCCACCATCTGCCTGAGTTCATG < 41bp 0.275387840357343 0.703562265051227 0.046236336 0.09383839 prediction 0.407124530102454 Functional Gain - TTC7A ENSG00000068724 CDS Human protein_coding chr2:47221568 chr2:47221572 nonsynonymous SNV 0.972 4 25 hm5C_associated_SNPs_127980 0 0 1 EFTUD2 POSTAR2 ENCODE chr2:47221568-47221591
64251 chr6 42992814 42992814 1 + T C COAD 42992812 + 42992792 42992832 41 AATTGGTAGCTGGAAATAGTCCTAAGAAACAAGCTTCTAGA AATTGGTAGCTGGAAATAGTCCCAAGAAACAAGCTTCTAGA < 41bp 0.416146170023801 0.703551817475022 0.08752462 0.06057301 prediction 0.407103634950044 Functional Gain - RRP36 ENSG00000124541 CDS Human protein_coding chr6:42992812 chr6:42992814 synonymous SNV . 0 23 hm5C_associated_SNPs_127982 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:42992728-42992862
64251 chr1 204042433 204042433 1 + T G rs77321629 204042431 + 204042411 204042451 41 CTGAGGTTGGAGCCGGAGAGCGTGAGAGCCGAAGAGCAGGG CTGAGGTTGGAGCCGGAGAGCGGGAGAGCCGAAGAGCAGGG < 41bp 0.660735154764367 0.864271474908024 0.7056206 0.90075016 prediction 0.407072640287314 Functional Gain - SOX13 ENSG00000143842 upstream Human protein_coding chr1:204042431 chr1:204042433 . . 0 23 hm5C_associated_SNPs_127987 0 0 1 DDX3X POSTAR2 ENCODE chr1:204042389-204042520
64251 chr7 73932488 73932488 1 + C G rs112098981 73932487 + 73932467 73932507 41 AGGCGAGGCCCTGGGAAGGGCCAGTGTGGTGCCACTGCCCT AGGCGAGGCCCTGGGAAGGGCGAGTGTGGTGCCACTGCCCT < 41bp 0.374416887197512 0.70353554152958 0.21580482 0.43978214 prediction 0.407071083059161 Functional Gain - GTF2IRD1 ENSG00000006704 CDS Human protein_coding chr7:73932487 chr7:73932488 synonymous SNV . 0 22 hm5C_associated_SNPs_127988 0 0 10 BUD13 POSTAR2 ENCODE chr7:73932427-73932501
64251 chr19 917526 917526 1 + A G rs10407968 917523 + 917503 917543 41 ATGCACACCGTGGCTACGTCCGGACCCAACGCGTCCTGGGG ATGCACACCGTGGCTACGTCCGGGCCCAACGCGTCCTGGGG < 41bp 0.620942634558344 0.82447334480031 0.42601693 0.9076363 prediction 0.407061420483932 Functional Gain - KISS1R ENSG00000116014 CDS Human protein_coding chr19:917523 chr19:917526 synonymous SNV . 0 24 hm5C_associated_SNPs_127990 1 0 13 AARS POSTAR2 ENCODE chr19:917496-917546
64251 chr8 146278087 146278087 1 + T C UCEC 146278084 + 146278064 146278104 41 CAGCGCCCGGAATCCTTCCACTGTCTGTCTCTGCCCAGAGC CAGCGCCCGGAATCCTTCCACTGCCTGTCTCTGCCCAGAGC < 41bp 0.510021760090502 0.713547668357619 0.029424518 0.030638993 prediction 0.407051816534235 Functional Gain - C8orf33 ENSG00000182307 CDS Human protein_coding chr8:146278084 chr8:146278087 nonsynonymous SNV 0.013 1 24 hm5C_associated_SNPs_127992 0 0 23 EIF3B POSTAR2 GSE65004,GSM1585667 chr8:146278046-146278096
64251 chr11 64877380 64877380 1 + C T CESC 64877379 + 64877359 64877399 41 GCGGGTGGTGGAGGATACCACCGCCATCGACGTGCAGGTGC GCGGGTGGTGGAGGATACCACTGCCATCGACGTGCAGGTGC < 41bp 0.594083268734411 0.797598277125984 0.5321508 0.28331745 prediction 0.407030016783145 Functional Gain - VPS51 ENSG00000149823 CDS Human protein_coding chr11:64877379 chr11:64877380 synonymous SNV . 0 22 hm5C_associated_SNPs_127997 0 0 3 FMR1 POSTAR2 ENCODE chr11:64877281-64877398
64251 chr2 27258870 27258870 1 + C T SKCM 27258869 + 27258849 27258889 41 CATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAA CATGGTTACCGCATCTGTATCTAGGCCATCCTGCAAGACAA < 41bp 0.440316469321776 0.703502960656712 0.42133635 0.21599624 prediction 0.407005921313425 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258869 chr2:27258870 stopgain 0.999 1 22 hm5C_associated_SNPs_128004 0 0 3 DDX24 POSTAR2 ENCODE chr2:27258782-27258916
64251 chr1 28608798 28608798 1 + C A rs13886 28608797 + 28608777 28608817 41 GAAGCAACCGGCACCCCCTTCCGGCCTGAAAGCCCTCCCTG GAAGCAACCGGCACCCCCTTCAGGCCTGAAAGCCCTCCCTG < 41bp 0.465918433197518 0.703488854355573 0.8374486 0.8665712 prediction 0.406977708711145 Functional Gain - SESN2 ENSG00000130766 UTR3 Human protein_coding chr1:28608797 chr1:28608798 . . 0 22 hm5C_associated_SNPs_128007 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012388 chr1:28608769-28608804
64251 chr12 57921356 57921356 1 + C T SARC 57921355 + 57921335 57921375 41 GTCACCACGGCAACTACTGACCCGGGGGCCTCCTCTCTGGG GTCACCACGGCAACTACTGACTCGGGGGCCTCCTCTCTGGG < 41bp 0.645822930639443 0.849305282652815 0.520375 0.13381666 prediction 0.406964704026743 Functional Gain - MBD6 ENSG00000166987 CDS Human protein_coding chr12:57921355 chr12:57921356 nonsynonymous SNV 1.000 0 22 hm5C_associated_SNPs_128011 0 0 5 U2AF2 POSTAR2 GSE83923,CSM2221661 chr12:57921340-57921360
64251 chr20 31598921 31598921 1 + C T UCEC 31598920 + 31598900 31598940 41 TGGAGAGGCGCTTCAGCCCACCAGGTGAGTGCTCCCCTCCT TGGAGAGGCGCTTCAGCCCACTAGGTGAGTGCTCCCCTCCT < 41bp 0.581679504043652 0.785159782411725 0.83697355 0.82479954 prediction 0.406960556736145 Functional Gain - BPIFB2 ENSG00000078898 CDS Human protein_coding chr20:31598920 chr20:31598921 synonymous SNV . 0 22 hm5C_associated_SNPs_128015 0 0 3 BCCIP POSTAR2 ENCODE chr20:31598893-31598921
64251 chr19 58992220 58992220 1 + T G rs3752112 58992216 + 58992196 58992236 41 AGTGAACAAGGGGTCCCAAGCCAGTTCCCTGCCCCTGGTCT AGTGAACAAGGGGTCCCAAGCCAGGTCCCTGCCCCTGGTCT < 41bp 0.520606466411607 0.72408188839788 0.21443608 0.90101194 prediction 0.406950843972546 Functional Gain - ZNF446 ENSG00000083838 UTR3 Human protein_coding chr19:58992216 chr19:58992220 . . 0 25 hm5C_associated_SNPs_128017 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr19:58992200-58992220
64251 chr14 94640826 94640826 1 + C A COAD 94640822 + 94640802 94640842 41 CATGCATCCGCCGCCGCCCGCCGCCGCGATGGATTTCAGTC CATGCATCCGCCGCCGCCCGCCGCAGCGATGGATTTCAGTC < 41bp 0.313756878002602 0.703459091428598 0.26125187 0.36689934 prediction 0.406918182857197 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94640822 chr14:94640826 synonymous SNV . 0 25 hm5C_associated_SNPs_128022 0 0 1 DDX3X POSTAR2 ENCODE chr14:94640711-94640833
64251 chr3 180320056 180320056 1 + C T BRCA 180320055 + 180320035 180320075 41 CTGCATTCTCTAGCCATGGACCGGGACCTTTTGCGGCAGTC CTGCATTCTCTAGCCATGGACTGGGACCTTTTGCGGCAGTC < 41bp 0.518300438707184 0.721756633142873 0.6560558 0.4156344 prediction 0.406912388871378 Functional Gain - TTC14 ENSG00000163728 CDS Human protein_coding chr3:180320055 chr3:180320056 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_128024 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:180320055-180320067
64251 chr11 65123718 65123718 1 + C T SKCM 65123717 + 65123697 65123737 41 GTTCTTGCGCCTTCATTCCCCCCTGAGCCACCTCCCCCGGG GTTCTTGCGCCTTCATTCCCCTCTGAGCCACCTCCCCCGGG < 41bp 0.463920313477528 0.703449183471856 0.110114604 0.16485554 prediction 0.406898366943712 Functional Gain - TIGD3 ENSG00000173825 CDS Human protein_coding chr11:65123717 chr11:65123718 nonsynonymous SNV 0.022 0 22 hm5C_associated_SNPs_128030 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr11:65123700-65123720
64251 chr3 128532230 128532230 1 + C A HNSC 128532229 + 128532209 128532249 41 ATCAAACTGGACAAGAATGACCGGGCCAAGGCCTCGGCAGA ATCAAACTGGACAAGAATGACAGGGCCAAGGCCTCGGCAGA < 41bp 0.634285708907954 0.837729550447924 0.67540026 0.8892422 prediction 0.40688768307994 Functional Gain - RAB7A ENSG00000075785 CDS Human protein_coding chr3:128532229 chr3:128532230 synonymous SNV . 0 22 hm5C_associated_SNPs_128032 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:128532169-128532236
64251 chr1 113657236 113657236 1 + C T LGG 113657235 + 113657215 113657255 41 GCTTCTCATCATTGTAGATGCCGGGCTAGAAGATGCTGGGA GCTTCTCATCATTGTAGATGCTGGGCTAGAAGATGCTGGGA < 41bp 0.457946410714051 0.703440960374196 0.41486597 0.39570758 prediction 0.406881920748392 Functional Gain - LRIG2 ENSG00000198799 CDS Human protein_coding chr1:113657235 chr1:113657236 synonymous SNV . 0 22 hm5C_associated_SNPs_128034 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:113657220-113657240
64251 chr7 6442433 6442433 1 + C T rs12977 6442432 + 6442412 6442452 41 GCATTGTTGTGCCGAGAACACCGAGCACTGAACTTTGCAAA GCATTGTTGTGCCGAGAACACTGAGCACTGAACTTTGCAAA < 41bp 0.555464959934393 0.758904013263308 0.3217494 0.21779248 prediction 0.406878106657832 Functional Gain - RAC1 ENSG00000136238 UTR3 Human protein_coding chr7:6442432 chr7:6442433 . . 0 22 hm5C_associated_SNPs_128036 0 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:6442352-6442929
64251 chr1 147092304 147092304 1 + C A LUAD 147092303 + 147092283 147092323 41 GCAGGAGTATGGCATGGGCCCCAGACCATTCCTTCCCATGT GCAGGAGTATGGCATGGGCCCAAGACCATTCCTTCCCATGT < 41bp 0.438900159376603 0.703436033079686 0.11836982 0.42077392 prediction 0.406872066159373 Functional Gain - BCL9 ENSG00000116128 CDS Human protein_coding chr1:147092303 chr1:147092304 synonymous SNV . 0 22 hm5C_associated_SNPs_128039 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr1:147092287-147092316
64251 chr6 27101030 27101030 1 + C T SKCM 27101029 + 27101009 27101049 41 AGCGGTGCTGGAGTACCTGACCGCCGAGATCCTGGAACTGG AGCGGTGCTGGAGTACCTGACTGCCGAGATCCTGGAACTGG < 41bp 0.482441471338173 0.703430611693371 0.20523122 0.17462805 prediction 0.406861223386742 Functional Gain - HIST1H2AG ENSG00000196787 CDS Human protein_coding chr6:27101029 chr6:27101030 synonymous SNV . 0 22 hm5C_associated_SNPs_128042 0 0 45 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr6:27100957-27101031
64251 chr12 27933832 27933832 1 + T A LUAD 27933828 + 27933808 27933848 41 AGCAGAGGCTGAGGGAGGCCCGGATGACTGGGACTCCTGTC AGCAGAGGCTGAGGGAGGCCCGGAAGACTGGGACTCCTGTC < 41bp 0.693263073743801 0.896692564492684 0.85502493 0.71709156 prediction 0.406858981497765 Functional Gain - KLHL42 ENSG00000087448 CDS Human protein_coding chr12:27933828 chr12:27933832 nonsynonymous SNV 0.976 2 25 hm5C_associated_SNPs_128044 0 0 1 NKRF POSTAR2 ENCODE chr12:27933823-27933915
64251 chr3 101395684 101395684 1 - G A SKCM 101395685 - 101395665 101395705 41 CGAGCCGTATGCGCCGGGCACCGAGGGCAATGTCAAGCGTA CGAGCCGTATGCGCCGGGCACTGAGGGCAATGTCAAGCGTA < 41bp 0.547063641079704 0.750484149698068 0.8543514 0.6932351 prediction 0.406841017236728 Functional Gain - ZBTB11 ENSG00000066422 CDS Human protein_coding chr3:101395685 chr3:101395684 synonymous SNV . 0 22 hm5C_associated_SNPs_128051 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr3:101395678-101395698
64251 chr1 149858536 149858536 1 + T G UCS 149858534 + 149858514 149858554 41 TGATTTCAGTCATGTCTGGTCGTGGCAAACAAGGAGGCAAG TGATTTCAGTCATGTCTGGTCGGGGCAAACAAGGAGGCAAG < 41bp 0.706447136983782 0.909853969207825 0.44357342 0.9069836 prediction 0.406813664448087 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858534 chr1:149858536 synonymous SNV . 0 23 hm5C_associated_SNPs_128056 0 0 45 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:149858460-149858540
64251 chr19 577944 577944 1 + C T COAD 577943 + 577923 577963 41 GGCGCCCGGCTGGACCGCGTCCACATCCACGCCACCTACCA GGCGCCCGGCTGGACCGCGTCTACATCCACGCCACCTACCA < 41bp 0.46984963157512 0.703396195550199 0.10166752 0.9290273 prediction 0.406792391100399 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:577943 chr19:577944 nonsynonymous SNV 0.197 1 22 hm5C_associated_SNPs_128060 0 0 1 CSTF2T POSTAR2 ENCODE chr19:577943-578022
64251 chr21 45876639 45876639 1 + C T STAD 45876638 + 45876618 45876658 41 GCCGCCTGCCCACAGCCCTGCCGGTGCCCTGACCACGCAGG GCCGCCTGCCCACAGCCCTGCTGGTGCCCTGACCACGCAGG < 41bp 0.579928360159159 0.783324398249249 0.3969075 0.32253438 prediction 0.40679207618018 Functional Gain - LRRC3 ENSG00000160233 CDS Human protein_coding chr21:45876638 chr21:45876639 nonsynonymous SNV 0.007 2 22 hm5C_associated_SNPs_128061 0 0 2 DDX3X POSTAR2 ENCODE chr21:45876589-45876646
64251 chr10 75843188 75843188 1 + T C STAD 75843185 + 75843165 75843205 41 GCTGGAAAAGTTGGTGAACTCTGTGCAGGCAAAGAACGCAG GCTGGAAAAGTTGGTGAACTCTGCGCAGGCAAAGAACGCAG < 41bp 0.588467434638798 0.791860668244916 0.11455384 0.063981354 prediction 0.406786467212235 Functional Gain - VCL ENSG00000035403 CDS Human protein_coding chr10:75843185 chr10:75843188 synonymous SNV . 0 24 hm5C_associated_SNPs_128063 0 0 7 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:75843143-75843188
64251 chr14 60585353 60585353 1 + C T SKCM 60585352 + 60585332 60585372 41 GCAGATACAGTGTACTACTACCAAATGGTGCCCAGGTTGAC GCAGATACAGTGTACTACTACTAAATGGTGCCCAGGTTGAC < 41bp 0.427228935967259 0.703387332667159 0.095272124 0.20456278 prediction 0.406774665334318 Functional Gain - PCNX4 ENSG00000126773 CDS Human protein_coding chr14:60585352 chr14:60585353 stopgain 0.940 0 22 hm5C_associated_SNPs_128065 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:60585303-60585358
64251 chr2 219677004 219677004 1 + C A rs59443548 219677000 + 219676980 219677020 41 TGAACCAGCGGTTGCTGAAGCCAGCGGAAGCAGCGCTCTAT TGAACCAGCGGTTGCTGAAGCCAGAGGAAGCAGCGCTCTAT < 41bp 0.293097092152421 0.703385798254198 0.89556205 0.9014854 prediction 0.406771596508396 Functional Gain - CYP27A1 ENSG00000135929 CDS Human protein_coding chr2:219677000 chr2:219677004 nonsynonymous SNV 0.005 0 25 hm5C_associated_SNPs_128067 0 0 2 SND1 POSTAR2 ENCODE chr2:219676982-219677024
64251 chr11 85366750 85366750 1 + C G HNSC 85366746 + 85366726 85366766 41 ACCTGTAAATGGTGGTCTAGCAGCCAGGTAGGAAATAAAAA ACCTGTAAATGGTGGTCTAGCAGCGAGGTAGGAAATAAAAA < 41bp 0.42596716656155 0.703381044135929 0.2232477 0.44046965 prediction 0.406762088271859 Functional Gain - TMEM126A ENSG00000171202 CDS Human protein_coding chr11:85366746 chr11:85366750 synonymous SNV . 0 25 hm5C_associated_SNPs_128070 0 0 1 LARP4 POSTAR2 ENCODE chr11:85366670-85366753
64251 chr16 67571396 67571396 1 + C G rs1106516 67571395 + 67571375 67571415 41 CAGAGCCGCTGGGAGCGAGCCCGGAGCCCAGCCGGGCGGCT CAGAGCCGCTGGGAGCGAGCCGGGAGCCCAGCCGGGCGGCT < 41bp 0.679168126112292 0.882535982436377 0.88893473 0.90114295 prediction 0.40673571264817 Functional Gain - RIPOR1 ENSG00000039523 UTR5 Human protein_coding chr16:67571395 chr16:67571396 . . 0 22 hm5C_associated_SNPs_128074 0 0 3 CSTF2T POSTAR2 ENCODE chr16:67571310-67571401
64251 chr16 30990696 30990696 1 + C T rs537371612 30990695 + 30990675 30990715 41 AAGTTTCCCGGCCCAGCCTCCCGCAAGGCTCCCCGGGGCGT AAGTTTCCCGGCCCAGCCTCCTGCAAGGCTCCCCGGGGCGT < 41bp 0.438687246600316 0.703357816517123 0.18158397 0.21584725 prediction 0.406715633034246 Functional Gain - SETD1A ENSG00000099381 CDS Human protein_coding chr16:30990695 chr16:30990696 nonsynonymous SNV 0.337 2 22 hm5C_associated_SNPs_128075 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr16:30990677-30990698
64251 chrX 48340054 48340054 1 + C T STAD 48340053 + 48340033 48340073 41 CTGTCAGGGCTATGACCCTCCCGAGGGCTTCATCCCGGACC CTGTCAGGGCTATGACCCTCCTGAGGGCTTCATCCCGGACC < 41bp 0.626133546518873 0.82948940121246 0.46045136 0.17968422 prediction 0.406711709387173 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48340053 chrX:48340054 synonymous SNV . 0 22 hm5C_associated_SNPs_128077 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:48340046-48340074
64251 chr5 8460415 8460415 1 + C A rs34805629 8460411 + 8460391 8460431 41 GGCTCGCCTGAGCTGAAAGGCAGCCCTCACATCCCGTCGGC GGCTCGCCTGAGCTGAAAGGCAGCACTCACATCCCGTCGGC < 41bp 0.730156354650061 0.933506988052621 0.13327211 0.14906925 prediction 0.40670126680512 Functional Gain - MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8460411 chr5:8460415 . . 0 25 hm5C_associated_SNPs_128081 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:8460413-8460458
64251 chr21 47418319 47418319 1 + C T READ 47418318 + 47418298 47418338 41 CTTTTCCATGACAGGGGTATCCGGGCAACAGGGGCGCTCCC CTTTTCCATGACAGGGGTATCTGGGCAACAGGGGCGCTCCC < 41bp 0.588016763935399 0.791356476030711 0.918836 0.84845114 prediction 0.406679424190624 Functional Gain - COL6A1 ENSG00000142156 CDS Human protein_coding chr21:47418318 chr21:47418319 nonsynonymous SNV 0.661 2 22 hm5C_associated_SNPs_128083 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr21:47418298-47418333
64251 chr10 74034536 74034536 1 + A G COAD 74034533 + 74034513 74034553 41 ATGAACACTTGTGTGCCAACCTGATGCAGCTGCTGCAGGAG ATGAACACTTGTGTGCCAACCTGGTGCAGCTGCTGCAGGAG < 41bp 0.619358327404688 0.822680027623808 0.26350522 0.61549115 prediction 0.406643400438241 Functional Gain - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034533 chr10:74034536 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_128090 0 0 23 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:74034469-74034553
64251 chr10 105128280 105128280 1 + C A BLCA 105128279 + 105128259 105128299 41 CACGGTCGTCTCAGGTTCAGCCTCAGGTCCTGCGGCTCCGG CACGGTCGTCTCAGGTTCAGCATCAGGTCCTGCGGCTCCGG < 41bp 0.445093045761785 0.703316883907316 0.3202052 0.46422234 prediction 0.406633767814631 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105128279 chr10:105128280 synonymous SNV . 0 22 hm5C_associated_SNPs_128096 0 0 1 PRPF8 POSTAR2 ENCODE chr10:105128280-105128352
64251 chr7 157046771 157046771 1 + C T GBM 157046770 + 157046750 157046790 41 CGCCAGCACTGCCTGGCTTTCCGCCAGGGCCTTGCCAATGT CGCCAGCACTGCCTGGCTTTCTGCCAGGGCCTTGCCAATGT < 41bp 0.426537122175774 0.703315047590904 0.16237497 0.16604519 prediction 0.406630095181808 Functional Gain - UBE3C ENSG00000009335 CDS Human protein_coding chr7:157046770 chr7:157046771 nonsynonymous SNV 0.584 4 22 hm5C_associated_SNPs_128098 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:157046746-157046788
64251 chr1 20238707 20238707 1 + T G rs187788362 20238705 + 20238685 20238725 41 GCCGGACAGACTCTCTGTGGCCTGGCTCTCATCCTTGGCGT GCCGGACAGACTCTCTGTGGCCGGGCTCTCATCCTTGGCGT < 41bp 0.678240035511082 0.881549653392022 0.12033442 0.82729065 prediction 0.406619235761881 Functional Gain - OTUD3 ENSG00000169914 UTR3 Human protein_coding chr1:20238705 chr1:20238707 . . 0 23 hm5C_associated_SNPs_128102 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:20238667-20238728
64251 chr11 1594228 1594228 1 + C A rs373089991 1594224 + 1594204 1594244 41 GGGCTGTTGAGGGGCCGCACCCCGCCGACCGCTGTGGGAAC GGGCTGTTGAGGGGCCGCACCCCGACGACCGCTGTGGGAAC < 41bp 0.350794351029456 0.703290084193442 0.42191264 0.35262758 prediction 0.406580168386884 Functional Gain - KRTAP5-AS1 ENSG00000233930 ncRNA_exonic Human antisense chr11:1594224 chr11:1594228 . . 0 25 hm5C_associated_SNPs_128107 0 0 2 CSTF2T POSTAR2 ENCODE chr11:1594142-1594238
64251 chr1 166818617 166818617 1 + C T ESCA 166818616 + 166818596 166818636 41 TCTGGTGGACCAGCGTGTGGCCGAATATGTCAGATACATGC TCTGGTGGACCAGCGTGTGGCTGAATATGTCAGATACATGC < 41bp 0.62801906939526 0.831308214967133 0.1721682 0.26125887 prediction 0.406578291143745 Functional Gain - POGK ENSG00000143157 CDS Human protein_coding chr1:166818616 chr1:166818617 synonymous SNV . 0 22 hm5C_associated_SNPs_128108 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:166818582-166818619
64251 chr17 40695361 40695361 1 + A G STAD 40695358 + 40695338 40695378 41 GGTAGGCACGGGCATGGCCCCCGAGGGCATCAGCCAGAACG GGTAGGCACGGGCATGGCCCCCGGGGGCATCAGCCAGAACG < 41bp 0.454806682118523 0.703283158891357 0.118813515 0.8912916 prediction 0.406566317782713 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695358 chr17:40695361 nonsynonymous SNV 0.927 5 24 hm5C_associated_SNPs_128110 0 0 1 RBM15 POSTAR2 ENCODE chr17:40695308-40695400
64251 chr2 242743447 242743447 1 + C T BLCA 242743446 + 242743426 242743466 41 GACATCCTGGGTTACAACCTCCGGCCGGGCCTGGACAACCA GACATCCTGGGTTACAACCTCTGGCCGGGCCTGGACAACCA < 41bp 0.478972007430741 0.703281794107014 0.5351009 0.43853873 prediction 0.406563588214028 Functional Gain - GAL3ST2 ENSG00000154252 CDS Human protein_coding chr2:242743446 chr2:242743447 nonsynonymous SNV 0.520 3 22 hm5C_associated_SNPs_128112 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:242743436-242743466
64251 chr10 102749475 102749475 1 + C A UCEC 102749471 + 102749451 102749491 41 TTGTGTTCCCAGGGGGTGAACACACTGTGGGGTAGCTTCGA TTGTGTTCCCAGGGGGTGAACACAATGTGGGGTAGCTTCGA < 41bp 0.28226524080034 0.703278345788645 0.43031764 0.64711374 prediction 0.406556691577291 Functional Gain - TWNK ENSG00000107815 CDS Human protein_coding chr10:102749471 chr10:102749475 nonsynonymous SNV 0.997 5 25 hm5C_associated_SNPs_128116 0 0 3 FMR1 POSTAR2 GSE39682,GSM977615 chr10:102749423-102749496
64251 chr22 21991224 21991224 1 + C T rs45533832 21991223 + 21991203 21991243 41 GCTCTACATGTCTGCCTGCACCGGCATGGGTTCCAGTCCCC GCTCTACATGTCTGCCTGCACTGGCATGGGTTCCAGTCCCC < 41bp 0.573280679375496 0.776555312741508 0.54070914 0.3839778 prediction 0.406549266732025 Functional Gain - CCDC116 ENSG00000161180 CDS Human protein_coding chr22:21991223 chr22:21991224 synonymous SNV . 0 22 hm5C_associated_SNPs_128117 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:21991212-21991238
64251 chr20 44573541 44573541 1 + C T SKCM 44573540 + 44573520 44573560 41 ATCTGCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGCC ATCTGCGGAGGCAGTGTGGCCTCCACGTCTCGGCCGCAGCC < 41bp 0.657534891031587 0.860806230444304 0.12057623 0.88958097 prediction 0.406542678825433 Functional Gain - PCIF1 ENSG00000100982 CDS Human protein_coding chr20:44573540 chr20:44573541 nonsynonymous SNV 0.957 4 22 hm5C_associated_SNPs_128122 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44573533-44573555
64251 chr2 27261056 27261056 1 + A G UCEC 27261053 + 27261033 27261073 41 AGTGCCTGACGGTGGACCCCCTCAGTGCCAGCGTCTGGAGG AGTGCCTGACGGTGGACCCCCTCGGTGCCAGCGTCTGGAGG < 41bp 0.638650976846451 0.841922198613258 0.09677768 0.07160461 prediction 0.406542443533615 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27261053 chr2:27261056 nonsynonymous SNV 0.649 4 24 hm5C_associated_SNPs_128123 0 0 10 BUD13 POSTAR2 ENCODE chr2:27260970-27261057
64251 chr9 132640637 132640637 1 + C T rs568535068 132640636 + 132640616 132640656 41 GTTGAACAAGGCCTTCCAGGCCGAGGAGTCGCCGGGCGTCA GTTGAACAAGGCCTTCCAGGCTGAGGAGTCGCCGGGCGTCA < 41bp 0.457777191149489 0.703268657647543 0.4168033 0.30810565 prediction 0.406537315295086 Functional Gain - USP20 ENSG00000136878 CDS Human protein_coding chr9:132640636 chr9:132640637 synonymous SNV . 0 22 hm5C_associated_SNPs_128125 0 0 3 BUD13 POSTAR2 ENCODE chr9:132640627-132640652
64251 chr6 349099 349099 1 + C T rs544991071 349098 + 349078 349118 41 CCTTCCCCCAAGCAACACCGCCCAGCCCTGCTCCAGGCCCC CCTTCCCCCAAGCAACACCGCTCAGCCCTGCTCCAGGCCCC < 41bp 0.489367018769665 0.703268535547083 0.036226362 0.07487404 prediction 0.406537071094166 Functional Gain - DUSP22 ENSG00000112679 UTR3 Human protein_coding chr6:349098 chr6:349099 . . 0 22 hm5C_associated_SNPs_128126 0 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr6:349055-349152
64251 chrX 38525539 38525539 1 + T C LUSC 38525537 + 38525517 38525557 41 TTGGATGCTTTGCTACATGTCGTGGTAGCCCATGGATGCTG TTGGATGCTTTGCTACATGTCGCGGTAGCCCATGGATGCTG < 41bp 0.66474695422817 0.868008821273274 0.88304365 0.86048806 prediction 0.406523734090209 Functional Gain - TSPAN7 ENSG00000156298;ENSG00000250349 CDS Human other chrX:38525537 chrX:38525539 synonymous SNV . 0 23 hm5C_associated_SNPs_128133 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chrX:38525497-38525557
64251 chr15 67457694 67457694 1 + A G LAML 67457691 + 67457671 67457711 41 CCCGAAAACACTAACTTCCCCGCAGGCATCGAGCCCCAGAG CCCGAAAACACTAACTTCCCCGCGGGCATCGAGCCCCAGAG < 41bp 0.632756295769348 0.836013549133204 0.04586196 0.2068601 prediction 0.406514506727712 Functional Gain - SMAD3 ENSG00000166949 CDS Human protein_coding chr15:67457691 chr15:67457694 synonymous SNV . 0 24 hm5C_associated_SNPs_128135 0 0 6 BUD13 POSTAR2 ENCODE chr15:67457675-67457725
64251 chr19 54024312 54024312 1 + C A rs73935607 54024311 + 54024291 54024331 41 ATGAGGAGCGAGCCGGGTGGCCGGCTGAGGGGCGTGCTTCA ATGAGGAGCGAGCCGGGTGGCAGGCTGAGGGGCGTGCTTCA < 41bp 0.592516544027068 0.795767256250824 0.9075914 0.9096769 prediction 0.406501424447511 Functional Gain - ZNF331 ENSG00000130844 UTR5 Human protein_coding chr19:54024311 chr19:54024312 . . 0 22 hm5C_associated_SNPs_128136 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr19:54024312-54024313
64251 chr19 3381966 3381966 1 + T G SKCM 3381964 + 3381944 3381984 41 CGCGAGGACTTCGTGCTGAGCATCACCGGCAAGAAGGCGCC CGCGAGGACTTCGTGCTGAGCAGCACCGGCAAGAAGGCGCC < 41bp 0.343709456918804 0.703245013059382 0.40122753 0.8324103 prediction 0.406490026118763 Functional Gain - NFIC ENSG00000141905 CDS Human protein_coding chr19:3381964 chr19:3381966 nonsynonymous SNV 0.959 2 23 hm5C_associated_SNPs_128140 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:3381950-3381985
64251 chr12 53807773 53807773 1 + A G rs140808297 53807770 + 53807750 53807790 41 GATCCAGTATCTTGTTTGGCCTCAAAACAGAAGCAGCTTCT GATCCAGTATCTTGTTTGGCCTCGAAACAGAAGCAGCTTCT < 41bp 0.47087432383917 0.703244989196031 0.12161729 0.85176724 prediction 0.406489978392063 Functional Gain - SP1 ENSG00000185591 UTR3 Human protein_coding chr12:53807770 chr12:53807773 . . 0 24 hm5C_associated_SNPs_128141 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr12:53807736-53807776
64251 chrX 136649433 136649433 1 + C T LUAD 136649432 + 136649412 136649452 41 CTGCGTGGGGAGCTGTTCGGCCGTGCTGACCCATACCGCCC CTGCGTGGGGAGCTGTTCGGCTGTGCTGACCCATACCGCCC < 41bp 0.561818492115062 0.765056400692169 0.24781421 0.09905517 prediction 0.406475817154214 Functional Gain - ZIC3 ENSG00000156925 CDS Human protein_coding chrX:136649432 chrX:136649433 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_128146 0 0 1 RBM15B POSTAR2 GSE78030,GSM2064711 chrX:136649420-136649440
64251 chr18 72347414 72347414 1 + C T HNSC 72347413 + 72347393 72347433 41 AGGCCAGTGTGGAGGAGCTTCCGGAGGGAGGGGCCACCTTT AGGCCAGTGTGGAGGAGCTTCTGGAGGGAGGGGCCACCTTT < 41bp 0.607639561095925 0.810877127548936 0.904844 0.79644024 prediction 0.406475132906022 Functional Gain - ZNF407 ENSG00000215421 CDS Human protein_coding chr18:72347413 chr18:72347414 nonsynonymous SNV 0.970 4 22 hm5C_associated_SNPs_128147 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr18:72347389-72347416
64251 chr12 53776556 53776556 1 + T A OV 53776552 + 53776532 53776572 41 ACCTGTCAACAGCGTTTCTGCAGCTACCTTGACTCCCAGCT ACCTGTCAACAGCGTTTCTGCAGCAACCTTGACTCCCAGCT < 41bp 0.360111407501081 0.703234537418802 0.40018183 0.414475 prediction 0.406469074837605 Functional Gain - SP1 ENSG00000185591 CDS Human protein_coding chr12:53776552 chr12:53776556 synonymous SNV . 0 25 hm5C_associated_SNPs_128150 0 0 9 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:53776541-53776570
64251 chr12 98989337 98989337 1 + T A UCEC 98989333 + 98989313 98989353 41 ATCTGGTTAAATGCAGAATGCAGGTTTGTTTTGCATGCTGG ATCTGGTTAAATGCAGAATGCAGGATTGTTTTGCATGCTGG < 41bp 0.558218442718333 0.761447352944146 0.20156571 0.32356545 prediction 0.406457820451626 Functional Gain - SLC25A3 ENSG00000075415;ENSG00000075415 exonic;splicing Human other chr12:98989333 chr12:98989337 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_128151 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr12:98989301-98989342
64251 chr17 66038409 66038409 1 + T C UCEC 66038406 + 66038386 66038426 41 CCATCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCT CCATCCCAGCATTCATTTCTCTGCTGGCATCTCCCCATGCT < 41bp 0.55619709864763 0.759421614034872 0.2867077 0.4585826 prediction 0.406449030774485 Functional Gain - KPNA2 ENSG00000182481 CDS Human protein_coding chr17:66038406 chr17:66038409 synonymous SNV . 0 24 hm5C_associated_SNPs_128152 0 0 11 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:66038374-66038412
64251 chr9 131011001 131011001 1 + C A LIHC 131011000 + 131010980 131011020 41 AGACCGTGAGGGACCTCATGCCCAAGACCATCATGCACCTC AGACCGTGAGGGACCTCATGCACAAGACCATCATGCACCTC < 41bp 0.434266657266208 0.703212585581715 0.011974722 0.033373386 prediction 0.40642517116343 Functional Gain - DNM1 ENSG00000106976 CDS Human protein_coding chr9:131011000 chr9:131011001 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_128156 0 0 1 ZNF622 POSTAR2 ENCODE chr9:131010963-131011009
64251 chr13 115070306 115070306 1 + C T UCEC 115070305 + 115070285 115070325 41 TATGATCCAGGAGCTCGCTTCCGAGCGCGAGAGTGTGGCGG TATGATCCAGGAGCTCGCTTCTGAGCGCGAGAGTGTGGCGG < 41bp 0.458803522972576 0.703208086843753 0.8536675 0.46157095 prediction 0.406416173687507 Functional Gain - UPF3A ENSG00000169062 CDS Human protein_coding chr13:115070305 chr13:115070306 stopgain 0.011 1 22 hm5C_associated_SNPs_128158 0 0 3 BUD13 POSTAR2 ENCODE chr13:115070227-115070336
64251 chr5 94927146 94927146 1 + A G LGG 94927143 + 94927123 94927163 41 TTCATCAATTAGATCTTCTTCAGAAAACTATTGTCATATAC TTCATCAATTAGATCTTCTTCAGGAAACTATTGTCATATAC < 41bp 0.577176734738764 0.780379741638035 0.18123835 0.22400668 prediction 0.406406013798543 Functional Gain - ARSK ENSG00000164291 CDS Human protein_coding chr5:94927143 chr5:94927146 nonsynonymous SNV 0.924 1 24 hm5C_associated_SNPs_128162 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:94927118-94927146
64251 chr12 97334223 97334223 1 + A G LIHC 97334220 + 97334200 97334240 41 CATAAACACAGACACTTTATCTAAGGAAACAGACAGTGGAA CATAAACACAGACACTTTATCTAGGGAAACAGACAGTGGAA < 41bp 0.584820484323854 0.788023250397059 0.20697427 0.69067293 prediction 0.40640553214641 Functional Gain - NEDD1 ENSG00000139350 CDS Human protein_coding chr12:97334220 chr12:97334223 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_128163 0 0 6 FMR1 POSTAR2 GSE39682,GSM977615 chr12:97334199-97334224
64251 chr15 38776495 38776495 1 + A G rs544203250 38776492 + 38776472 38776512 41 TGCCTGACAGGGGAGGCCGGCCGAATGAAATTGAACCACCA TGCCTGACAGGGGAGGCCGGCCGGATGAAATTGAACCACCA < 41bp 0.585173260663346 0.788368927209707 0.41468874 0.7909817 prediction 0.406391333092721 Functional Gain - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38776492 chr15:38776495 nonsynonymous SNV 0.994 0 24 hm5C_associated_SNPs_128169 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:38776461-38776495
64251 chrX 64722748 64722748 1 + C T UCEC 64722747 + 64722727 64722767 41 CAAAGACGACCTCCCCTGTGCCGGGAACAGCATGCCAGCTG CAAAGACGACCTCCCCTGTGCTGGGAACAGCATGCCAGCTG < 41bp 0.595501244731891 0.798695683478807 0.6727961 0.27742755 prediction 0.406388877493832 Functional Gain - ZC3H12B ENSG00000102053 CDS Human protein_coding chrX:64722747 chrX:64722748 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_128170 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:64722729-64722749
64251 chr3 52233298 52233298 1 + T G BLCA 52233294 + 52233274 52233314 41 GCCGCTGCCCATTCTTATCCCGAGTCCCCCAGGCCTTTCTG GCCGCTGCCCATTCTTATCCCGAGGCCCCCAGGCCTTTCTG < 41bp 0.560942954952931 0.764132612533106 0.28369588 0.9015641 prediction 0.40637931516035 Functional Gain - ALAS1 ENSG00000023330 CDS Human protein_coding chr3:52233294 chr3:52233298 nonsynonymous SNV 0.963 2 25 hm5C_associated_SNPs_128171 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:52233245-52233314
64251 chr1 150437071 150437071 1 + A G GBM 150437068 + 150437048 150437088 41 CCAGCAACCTCACCAGTGGCCTGAAAACACCTGCACCTGCC CCAGCAACCTCACCAGTGGCCTGGAAACACCTGCACCTGCC < 41bp 0.615144716149687 0.818318195248624 0.08604947 0.24682608 prediction 0.406346958197874 Functional Gain - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150437068 chr1:150437071 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_128177 0 0 2 IGF2BP1 POSTAR2 ENCODE chr1:150437022-150437203
64251 chr16 1779556 1779556 1 + C T UCEC 1779555 + 1779535 1779575 41 GGTCGGAGGAAACAGCCAGACCGAGAGCAGCCTGCCGGGGC GGTCGGAGGAAACAGCCAGACTGAGAGCAGCCTGCCGGGGC < 41bp 0.45797503897796 0.703170766387415 0.29861528 0.2045578 prediction 0.406341532774829 Functional Gain - MAPK8IP3 ENSG00000138834 CDS Human protein_coding chr16:1779555 chr16:1779556 synonymous SNV . 0 22 hm5C_associated_SNPs_128180 0 0 11 DDX24 POSTAR2 ENCODE chr16:1779499-1779579
64251 chr7 12728265 12728265 1 + T C LUSC 12728262 + 12728242 12728282 41 ATCAGAAAATCAGGGAGTCCCTGTACTTATAGTTGCTAACA ATCAGAAAATCAGGGAGTCCCTGCACTTATAGTTGCTAACA < 41bp 0.568601983307489 0.771764405324756 0.19780293 0.18621773 prediction 0.406324844034534 Functional Gain - ARL4A ENSG00000122644 CDS Human protein_coding chr7:12728262 chr7:12728265 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_128183 0 0 3 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr7:12728260-12728280
64251 chr10 5948548 5948548 1 + C T SKCM 5948547 + 5948527 5948567 41 GTGGAAGACCTCTATTGGAACCTGAGCTTGGTGTGCCACTT GTGGAAGACCTCTATTGGAACTTGAGCTTGGTGTGCCACTT < 41bp 0.450668479579035 0.703145206301626 0.62323093 0.5569953 prediction 0.406290412603253 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5948547 chr10:5948548 synonymous SNV . 0 22 hm5C_associated_SNPs_128193 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:5948539-5948554
64251 chr19 18975031 18975031 1 + C T SKCM 18975030 + 18975010 18975050 41 ATGCCCGGGAGGCCATCATCCCAGGCTCCGTCTATGATCGG ATGCCCGGGAGGCCATCATCCTAGGCTCCGTCTATGATCGG < 41bp 0.447110453018376 0.703136791280272 0.88408685 0.8539281 prediction 0.406273582560543 Functional Gain - UPF1 ENSG00000005007 CDS Human protein_coding chr19:18975030 chr19:18975031 nonsynonymous SNV 0.951 3 22 hm5C_associated_SNPs_128198 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:18975030-18975031
64251 chr5 173317621 173317621 1 + C A UCEC 173317617 + 173317597 173317637 41 CTACCAGAGTCCGTCACCAACACCCTCCTCTTCCTGGAGCC CTACCAGAGTCCGTCACCAACACCATCCTCTTCCTGGAGCC < 41bp 0.283445819349764 0.703134713768696 0.06810179 0.078659624 prediction 0.406269427537391 Functional Gain - CPEB4 ENSG00000113742 CDS Human protein_coding chr5:173317617 chr5:173317621 synonymous SNV . 0 25 hm5C_associated_SNPs_128199 0 0 1 RBM15 POSTAR2 ENCODE chr5:173317550-173317622
64251 chrX 38664326 38664326 1 + C T UCEC 38664325 + 38664305 38664345 41 AGCTTGCTGCGCGACGTGCCCCTGGCTGACCCCGGGTTAGA AGCTTGCTGCGCGACGTGCCCTTGGCTGACCCCGGGTTAGA < 41bp 0.459704748498388 0.703131977966215 0.0697301 0.07217154 prediction 0.40626395593243 Functional Gain - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664325 chrX:38664326 synonymous SNV . 0 22 hm5C_associated_SNPs_128202 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:38664281-38664341
64251 chr19 37880058 37880058 1 + T G PAAD 37880055 + 37880035 37880075 41 GAATGTGGGAAGGCCTTTAGCCGTTATGCCTTCCTTGTTGA GAATGTGGGAAGGCCTTTAGCCGGTATGCCTTCCTTGTTGA < 41bp 0.298981456396464 0.703131749482562 0.104721546 0.39236122 prediction 0.406263498965123 Functional Gain - ZNF527 ENSG00000189164 CDS Human protein_coding chr19:37880055 chr19:37880058 synonymous SNV . 0 24 hm5C_associated_SNPs_128203 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:37880055-37880070
64251 chr11 86662969 86662969 1 - G A UCEC 86662970 - 86662950 86662990 41 ATTGTCAGGCTGACTGTAGGCCGGGAAAGGATATCCTGTGA ATTGTCAGGCTGACTGTAGGCTGGGAAAGGATATCCTGTGA < 41bp 0.588199671987342 0.791329227477226 0.61821103 0.326599 prediction 0.406259110979768 Functional Gain - FZD4 ENSG00000174804 CDS Human protein_coding chr11:86662970 chr11:86662969 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_128205 0 0 2 LIN28A POSTAR2 GSE39873,GSM980593 chr11:86662957-86662978
64251 chr6 107955609 107955609 1 + C T SKCM 107955608 + 107955588 107955628 41 CTTGCCCCGCTGGTGCCGCCCCCGACCCTGCTCGTGCCGTA CTTGCCCCGCTGGTGCCGCCCTCGACCCTGCTCGTGCCGTA < 41bp 0.645439477822422 0.84856385568644 0.14043283 0.3608811 prediction 0.406248755728035 Functional Gain - SOBP ENSG00000112320 CDS Human protein_coding chr6:107955608 chr6:107955609 nonsynonymous SNV 0.995 2 22 hm5C_associated_SNPs_128208 0 0 2 DDX59 POSTAR2 ENCODE chr6:107955589-107955675
64251 chr3 158531790 158531790 1 + T C COAD 158531787 + 158531767 158531807 41 ACATGAACCTCATGGGATGGCTGTATTCTAAGATTGAAGCT ACATGAACCTCATGGGATGGCTGCATTCTAAGATTGAAGCT < 41bp 0.571855290117392 0.774969252995664 0.091243625 0.11698803 prediction 0.406227925756543 Functional Gain - MFSD1 ENSG00000118855 CDS Human protein_coding chr3:158531787 chr3:158531790 nonsynonymous SNV 0.926 3 24 hm5C_associated_SNPs_128211 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr3:158531786-158531820
64251 chr1 119683356 119683356 1 + T G rs587679243 119683352 + 119683332 119683372 41 CGACTCCTGCTTGCTGGGCGCGGCTTGGGCCTCCAGGCTGC CGACTCCTGCTTGCTGGGCGCGGCGTGGGCCTCCAGGCTGC < 41bp 0.544829510624332 0.74794136763742 0.41938323 0.8786509 prediction 0.406223714026176 Functional Gain - LOC101929147 ENSG00000231365 ncRNA_exonic Human antisense chr1:119683352 chr1:119683356 . . 0 25 hm5C_associated_SNPs_128212 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:119683319-119683360
64251 chr15 44630445 44630445 1 + A G rs202050874 44630442 + 44630422 44630462 41 GTTACTTGGGCAGAACAAATCAAAAGAGGTGGTGATGCAGG GTTACTTGGGCAGAACAAATCAAGAGAGGTGGTGATGCAGG < 41bp 0.550784929377204 0.753888805651543 0.7740054 0.8746524 prediction 0.406207752548678 Functional Gain - CASC4 ENSG00000166734 CDS Human protein_coding chr15:44630442 chr15:44630445 synonymous SNV . 0 24 hm5C_associated_SNPs_128215 0 0 3 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:44630422-44630447
64251 chr4 184626188 184626188 1 + T A HNSC 184626186 + 184626166 184626206 41 ACTGTCATCACTCTGCCGCACGTGATTGTGGAGAATATCCC ACTGTCATCACTCTGCCGCACGAGATTGTGGAGAATATCCC < 41bp 0.5190913493641 0.722191418762806 0.15804183 0.34154522 prediction 0.406200138797413 Functional Gain - TRAPPC11 ENSG00000168538 CDS Human protein_coding chr4:184626186 chr4:184626188 nonsynonymous SNV 0.940 4 23 hm5C_associated_SNPs_128219 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr4:184626183-184626214
64251 chr8 6338316 6338316 1 + C A LUAD 6338312 + 6338292 6338332 41 AGACGTCTGTGAGACCACGACTCACGTGCTTTCCGGGAAGC AGACGTCTGTGAGACCACGACTCAAGTGCTTTCCGGGAAGC < 41bp 0.293890152394795 0.703096305524192 0.110881776 0.22451612 prediction 0.406192611048383 Functional Gain - MCPH1 ENSG00000147316 CDS Human protein_coding chr8:6338312 chr8:6338316 nonsynonymous SNV 0.139 4 25 hm5C_associated_SNPs_128221 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:6338295-6338333
64251 chr19 45852823 45852823 1 + C A HNSC 45852822 + 45852802 45852842 41 TCTATGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGCC TCTATGAGGCACTGGGCGGGCACCATGACCCCAACGTGGCC < 41bp 0.440773932117835 0.7030935283515 0.2509848 0.35045272 prediction 0.406187056703 Functional Gain - KLC3 ENSG00000104892 CDS Human protein_coding chr19:45852822 chr19:45852823 nonsynonymous SNV 0.778 5 22 hm5C_associated_SNPs_128223 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:45852805-45852845
64251 chr19 19153587 19153587 1 + C A UCEC 19153586 + 19153566 19153606 41 ATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGC ATGGTCTCCAAGCGCATTGCCAAGGAGACCTTTGATGCAGC < 41bp 0.438036404603059 0.703092320178615 0.538344 0.9321534 prediction 0.406184640357229 Functional Gain - ARMC6 ENSG00000105676 CDS Human protein_coding chr19:19153586 chr19:19153587 nonsynonymous SNV 0.751 5 22 hm5C_associated_SNPs_128224 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:19153580-19153619
64251 chr16 81730227 81730227 1 + C T UCEC 81730226 + 81730206 81730246 41 CTGGTTCCAGCTCTACAGCCCCGGAGGGGTGGCCTGCGACG CTGGTTCCAGCTCTACAGCCCTGGAGGGGTGGCCTGCGACG < 41bp 0.63811974653417 0.84118734504269 0.8900478 0.5533872 prediction 0.406135197017038 Functional Gain - CMIP ENSG00000153815 CDS Human protein_coding chr16:81730226 chr16:81730227 synonymous SNV . 0 22 hm5C_associated_SNPs_128238 0 0 13 BUD13 POSTAR2 ENCODE chr16:81730142-81730231
64251 chr17 16342687 16342687 1 + T A rs35752829 16342683 + 16342663 16342703 41 AGTCTGCGAAGGCCGGGACCCGGTTCCCCGGCCCACAGTGG AGTCTGCGAAGGCCGGGACCCGGTACCCCGGCCCACAGTGG < 41bp 0.627371449498957 0.830437680304809 0.3891878 0.5724303 prediction 0.406132461611705 Functional Gain - LRRC75A-AS1 ENSG00000175061 ncRNA_exonic Human processed_transcript chr17:16342683 chr17:16342687 . . 0 25 hm5C_associated_SNPs_128239 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:16342638-16342722
64251 chr17 27009776 27009776 1 + C G rs146677116 27009772 + 27009752 27009792 41 GGCCAAAAAGTTTGGGCTTACTCCCGAGCAGTTTGGGGAGA GGCCAAAAAGTTTGGGCTTACTCCGGAGCAGTTTGGGGAGA < 41bp 0.414138214967953 0.703065400090735 0.2618374 0.8726546 prediction 0.40613080018147 Functional Gain - SUPT6H ENSG00000109111 CDS Human protein_coding chr17:27009772 chr17:27009776 synonymous SNV . 0 25 hm5C_associated_SNPs_128241 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:27009756-27009817
64251 chr11 34162078 34162078 1 + C G LUAD 34162077 + 34162057 34162097 41 GCCATCTCTCGCATCTATTTCCTGAACCAGCTGGGGGACCT GCCATCTCTCGCATCTATTTCGTGAACCAGCTGGGGGACCT < 41bp 0.379608910740909 0.703063003511238 0.16582787 0.41306657 prediction 0.406126007022476 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34162077 chr11:34162078 nonsynonymous SNV 0.778 1 22 hm5C_associated_SNPs_128243 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:34162060-34162080
64251 chr1 235596396 235596396 1 + C G rs370122779 235596392 + 235596372 235596412 41 AGTGCCAAGGACCACACATCCATGCGGATGAACGTGGCCAA AGTGCCAAGGACCACACATCCATGGGGATGAACGTGGCCAA < 41bp 0.671642276855879 0.874703025982424 0.40557733 0.5935556 prediction 0.40612149825309 Functional Gain - TBCE ENSG00000116957 CDS Human protein_coding chr1:235596392 chr1:235596396 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_128247 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:235596376-235596402
64251 chr5 134010904 134010904 1 + C T SKCM 134010903 + 134010883 134010923 41 TCCAGAAACTCAACTGTAACCCAGAGTAAGGCTTCAGATGT TCCAGAAACTCAACTGTAACCTAGAGTAAGGCTTCAGATGT < 41bp 0.628185863926563 0.831243992874366 0.22179016 0.110224575 prediction 0.406116257895605 Functional Gain - SEC24A ENSG00000113615 CDS Human protein_coding chr5:134010903 chr5:134010904 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_128248 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr5:134010879-134010906
64251 chr17 42636591 42636591 1 + C T COAD 42636590 + 42636570 42636610 41 CGTGCCCGGCGCACTACACGCCGCGCATGTCGCCCGACTTC CGTGCCCGGCGCACTACACGCTGCGCATGTCGCCCGACTTC < 41bp 0.473512823542075 0.703056992454418 0.7026527 0.70635176 prediction 0.406113984908835 Functional Gain - FZD2 ENSG00000180340 CDS Human protein_coding chr17:42636590 chr17:42636591 nonsynonymous SNV 0.995 1 22 hm5C_associated_SNPs_128249 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr17:42636543-42636612
64251 chr3 9412772 9412772 1 + T C LGG 9412770 + 9412750 9412790 41 GTTCTAAAGGATTTTGAAGACTTGGCTGGAAAACTCCCATG GTTCTAAAGGATTTTGAAGACTCGGCTGGAAAACTCCCATG < 41bp 0.653029920520698 0.856086626086512 0.04452789 0.06719655 prediction 0.406113411131629 Functional Gain - THUMPD3 ENSG00000134077 CDS Human protein_coding chr3:9412770 chr3:9412772 nonsynonymous SNV 0.998 2 23 hm5C_associated_SNPs_128250 0 0 12 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:9412741-9412777
64251 chr12 49742817 49742817 1 + C A UCEC 49742813 + 49742793 49742833 41 CTGGGAGTTCTGGAAGCTCCCAAGCTTTGTAGCTCAGGCCA CTGGGAGTTCTGGAAGCTCCCAAGATTTGTAGCTCAGGCCA < 41bp 0.739657648815178 0.942697012387984 0.60761124 0.8181307 prediction 0.406078727145613 Functional Gain - DNAJC22 ENSG00000178401 CDS Human protein_coding chr12:49742813 chr12:49742817 nonsynonymous SNV 0.961 1 25 hm5C_associated_SNPs_128259 0 0 2 EFTUD2 POSTAR2 ENCODE chr12:49742763-49742841
64251 chr21 39528455 39528455 1 + A G rs2836172 39528452 + 39528432 39528472 41 TGAAGCTGTTCATGCCAAGACCGAAAGTGCTGGCCCAGTAT TGAAGCTGTTCATGCCAAGACCGGAAGTGCTGGCCCAGTAT < 41bp 0.618047430677708 0.821082767166684 0.09001443 0.26517206 prediction 0.406070672977952 Functional Gain - DSCR8 ENSG00000198054 CDS Human protein_coding chr21:39528452 chr21:39528455 nonsynonymous SNV 0.007 1 24 hm5C_associated_SNPs_128262 0 0 8 IGF2BP1 POSTAR2 ENCODE chr21:39528433-39528508
64251 chrX 129189954 129189954 1 + T G rs200910217 129189950 + 129189930 129189970 41 CCAAGGCCGAGTTCTACAGGCAGGTGGCCTCCAGTCAGCTG CCAAGGCCGAGTTCTACAGGCAGGGGGCCTCCAGTCAGCTG < 41bp 0.517723521221116 0.720758465639591 0.8620937 0.9080106 prediction 0.406069888836951 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129189950 chrX:129189954 nonsynonymous SNV 1.000 0 25 hm5C_associated_SNPs_128263 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:129189939-129189967
64251 chr14 73525265 73525265 1 + A G rs2535923 73525262 + 73525242 73525282 41 AGACCTCCATCAGCTCGCCGCGCAGCGCGGCTGTATTTGCG AGACCTCCATCAGCTCGCCGCGCGGCGCGGCTGTATTTGCG < 41bp 0.47281048729196 0.703033370802956 0.106762886 0.342556 prediction 0.406066741605913 Functional Gain - RBM25 ENSG00000258813 ncRNA_exonic Human antisense chr14:73525262 chr14:73525265 . . 0 24 hm5C_associated_SNPs_128264 0 0 6 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:73525260-73525280
64251 chr15 39882160 39882160 1 + A G COAD 39882157 + 39882137 39882177 41 CATCATCTGCGGGGAGGACACAGACCTGGATGGCTGGCCCA CATCATCTGCGGGGAGGACACAGGCCTGGATGGCTGGCCCA < 41bp 0.630125924513514 0.833153432349235 0.5971968 0.88500386 prediction 0.40605501567144 Functional Gain - THBS1 ENSG00000137801 CDS Human protein_coding chr15:39882157 chr15:39882160 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_128265 0 0 5 IGF2BP1 POSTAR2 ENCODE chr15:39882138-39882203
64251 chrX 47106753 47106753 1 + C T SKCM 47106752 + 47106732 47106772 41 AGCCACAGAATGAGTCGAATCCGGAGCTGTACAAATATGAC AGCCACAGAATGAGTCGAATCTGGAGCTGTACAAATATGAC < 41bp 0.636546415863908 0.839566966951972 0.8411199 0.16888145 prediction 0.406041102176127 Functional Gain - USP11 ENSG00000102226 CDS Human protein_coding chrX:47106752 chrX:47106753 nonsynonymous SNV 0.210 1 22 hm5C_associated_SNPs_128268 0 0 10 FIP1L1 POSTAR2 GSE37401,GSM917675 chrX:47106700-47106760
64251 chr19 50985691 50985691 1 + C G COAD 50985688 + 50985668 50985708 41 GCCTTCTGCTGGCAGAGGAGCAGCTGGACTGGGGCCTTTGG GCCTTCTGCTGGCAGAGGAGCAGGTGGACTGGGGCCTTTGG < 41bp 0.484246859073576 0.703018550826263 0.9013001 0.9174586 prediction 0.406037101652525 Functional Gain - EMC10 ENSG00000161671 CDS Human protein_coding chr19:50985688 chr19:50985691 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_128269 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:50985638-50985862
64251 chr19 45594170 45594170 1 + A G rs3178166 45594167 + 45594147 45594187 41 CCTGCTAAAGAACCAGTTACCCCAGGAAAATTCGACTCCTG CCTGCTAAAGAACCAGTTACCCCGGGAAAATTCGACTCCTG < 41bp 0.58039719652044 0.7834059137151 0.8623046 0.8518157 prediction 0.406017434389319 Functional Gain - GEMIN7 ENSG00000142252 UTR3 Human protein_coding chr19:45594167 chr19:45594170 . . 0 24 hm5C_associated_SNPs_128272 0 0 6 CSTF2 POSTAR2 GSE37401,GSM917676 chr19:45594140-45594200
64251 chr22 19504124 19504124 1 + C T COAD 19504123 + 19504103 19504143 41 CATGGAGCATGGCACAGTGACCGTGGTGGGCATCCCCCCAG CATGGAGCATGGCACAGTGACTGTGGTGGGCATCCCCCCAG < 41bp 0.62642393915183 0.829429181639153 0.21148026 0.31399542 prediction 0.406010484974645 Functional Gain - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19504123 chr22:19504124 synonymous SNV . 0 22 hm5C_associated_SNPs_128274 0 0 5 FUS POSTAR2 DRA001158,DRS012384 chr22:19504102-19504133
64251 chr17 42427876 42427876 1 + C T CESC 42427875 + 42427855 42427895 41 TTCTGCGACCTGGTTCACACCCGCTGCATCACACCCACGGG TTCTGCGACCTGGTTCACACCTGCTGCATCACACCCACGGG < 41bp 0.45384428972347 0.702998646944561 0.19265723 0.19660485 prediction 0.405997293889123 Functional Gain - GRN ENSG00000030582 CDS Human protein_coding chr17:42427875 chr17:42427876 nonsynonymous SNV 0.040 3 22 hm5C_associated_SNPs_128278 0 0 5 NOL12 POSTAR2 ENCODE chr17:42427876-42427909
64251 chr1 21890642 21890642 1 + C T UCEC 21890641 + 21890621 21890661 41 ACTCAGACAACGAGATGCCCCCTGAGGCCTTGAGCCAGGGC ACTCAGACAACGAGATGCCCCTTGAGGCCTTGAGCCAGGGC < 41bp 0.441255425033549 0.702993205200117 0.06380007 0.07441378 prediction 0.405986410400234 Functional Gain - ALPL ENSG00000162551 CDS Human protein_coding chr1:21890641 chr1:21890642 nonsynonymous SNV 0.945 1 22 hm5C_associated_SNPs_128280 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr1:21890638-21890664
64251 chr7 150066870 150066870 1 + A G UCEC 150066867 + 150066847 150066887 41 GGGGCTACCGGAGTGTGGGCCGAAGCAGGCGCTGCAGCCGC GGGGCTACCGGAGTGTGGGCCGAGGCAGGCGCTGCAGCCGC < 41bp 0.586317782243727 0.789296797553448 0.7317331 0.8664156 prediction 0.405958030619441 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150066867 chr7:150066870 nonsynonymous SNV 0.997 1 24 hm5C_associated_SNPs_128290 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:150066860-150066880
64251 chr11 33094196 33094196 1 + C A OV 33094195 + 33094175 33094215 41 TGTCCCTACTACGATGCAATCCTGAGTAAGATCCTCGTCCG TGTCCCTACTACGATGCAATCATGAGTAAGATCCTCGTCCG < 41bp 0.644329900777124 0.847303872780512 0.19521964 0.5784949 prediction 0.405947944006777 Functional Gain - TCP11L1 ENSG00000176148 CDS Human protein_coding chr11:33094195 chr11:33094196 nonsynonymous SNV 0.249 4 22 hm5C_associated_SNPs_128293 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr11:33094162-33094200
64251 chr18 32398187 32398187 1 + C G LUAD 32398183 + 32398163 32398203 41 GAGAGTATGATGGGATTTCGCTACCGATGCCAACAGTGTCA GAGAGTATGATGGGATTTCGCTACGGATGCCAACAGTGTCA < 41bp 0.448096819354985 0.70295834311265 0.13910446 0.3340044 prediction 0.4059166862253 Functional Gain - DTNA ENSG00000134769 CDS Human protein_coding chr18:32398183 chr18:32398187 nonsynonymous SNV 1.000 5 25 hm5C_associated_SNPs_128301 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr18:32398171-32398194
64251 chr1 249212489 249212489 1 + A G HNSC 249212486 + 249212466 249212506 41 CCGGTGTGCCCTCTGCCACTCACAGACCAACACCCGGTGTG CCGGTGTGCCCTCTGCCACTCACGGACCAACACCCGGTGTG < 41bp 0.616591732712873 0.81954031502902 0.19347364 0.3442577 prediction 0.405897164632295 Functional Gain - PGBD2 ENSG00000185220 CDS Human protein_coding chr1:249212486 chr1:249212489 nonsynonymous SNV 0.204 1 24 hm5C_associated_SNPs_128304 0 0 1 UCHL5 POSTAR2 ENCODE chr1:249212438-249212498
64251 chr7 102106371 102106371 1 + C T GBM 102106370 + 102106350 102106390 41 ACAACCACCTGGAGACGCTGCCGGACAACCTGGGCCTGTCC ACAACCACCTGGAGACGCTGCTGGACAACCTGGGCCTGTCC < 41bp 0.628062649832915 0.830991136877654 0.72599447 0.7040029 prediction 0.405856974089477 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102106370 chr7:102106371 nonsynonymous SNV 0.952 4 22 hm5C_associated_SNPs_128313 0 0 2 METTL3 POSTAR2 GSE46705,GSM1135006 chr7:102106362-102106378
64251 chr3 136729035 136729035 1 + T C SKCM 136729033 + 136729013 136729053 41 GTGCCACGGCTGTGATGTCTCCTGAGGAACTCCTCAGGGCC GTGCCACGGCTGTGATGTCTCCCGAGGAACTCCTCAGGGCC < 41bp 0.661905825145881 0.864830469978527 0.7336142 0.82269716 prediction 0.405849289665291 Functional Gain - IL20RB ENSG00000174564 CDS Human protein_coding chr3:136729033 chr3:136729035 synonymous SNV . 0 23 hm5C_associated_SNPs_128315 0 0 2 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:136729013-136729036
64251 chr10 1043236 1043236 1 + C A LUSC 1043232 + 1043212 1043252 41 GTACCCAAATGTTGGGAAGTCCAGCTTCATCAACAAGGTTG GTACCCAAATGTTGGGAAGTCCAGATTCATCAACAAGGTTG < 41bp 0.289768171490926 0.702913451101423 0.22294837 0.25853664 prediction 0.405826902202845 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1043232 chr10:1043236 nonsynonymous SNV 0.999 4 25 hm5C_associated_SNPs_128318 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr10:1043183-1043240
64251 chr9 137017126 137017126 1 + A G rs34523253 137017123 + 137017103 137017143 41 AGTCGCATCTGGGACACCGCCTCAGGCCAGTGCCTGAAGAC AGTCGCATCTGGGACACCGCCTCGGGCCAGTGCCTGAAGAC < 41bp 0.631823999050126 0.834725471874411 0.049880117 0.07560623 prediction 0.405802945648571 Functional Gain - WDR5 ENSG00000196363 CDS Human protein_coding chr9:137017123 chr9:137017126 synonymous SNV . 0 24 hm5C_associated_SNPs_128324 0 0 2 PRPF8 POSTAR2 ENCODE chr9:137017110-137017145
64251 chr19 13049527 13049527 1 + C T OV 13049526 + 13049506 13049546 41 GTGCCGCTGCTGCTCGGCCTCCTCGGCCTGGCCGTCGCCGA GTGCCGCTGCTGCTCGGCCTCTTCGGCCTGGCCGTCGCCGA < 41bp 0.56600979906455 0.768911265665051 0.23929515 0.30418953 prediction 0.405802933201002 Functional Gain - CALR ENSG00000179218 CDS Human protein_coding chr19:13049526 chr19:13049527 nonsynonymous SNV 0.975 0 22 hm5C_associated_SNPs_128325 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:13049420-13049540
64251 chr19 7704679 7704679 1 + A G THYM 7704676 + 7704656 7704696 41 GTCTGGAGGCCATTTATTTGCTGAGCCCCACGGAGAAGGTG GTCTGGAGGCCATTTATTTGCTGGGCCCCACGGAGAAGGTG < 41bp 0.617909693585826 0.820804805631461 0.07239708 0.10686427 prediction 0.405790224091271 Functional Gain - STXBP2 ENSG00000076944 CDS Human protein_coding chr19:7704676 chr19:7704679 nonsynonymous SNV 0.995 2 24 hm5C_associated_SNPs_128328 0 0 12 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:7704657-7704685
64251 chr19 16238892 16238892 1 + T C rs147629164 16238889 + 16238869 16238909 41 ACCAGCGCGAAGGCCAACATCAATGTGGAAAATGTGAGTCC ACCAGCGCGAAGGCCAACATCAACGTGGAAAATGTGAGTCC < 41bp 0.564356993326257 0.767249817413661 0.20140994 0.38466007 prediction 0.405785648174809 Functional Gain - RAB8A ENSG00000167461 CDS Human protein_coding chr19:16238889 chr19:16238892 synonymous SNV . 0 24 hm5C_associated_SNPs_128329 0 0 7 BUD13 POSTAR2 ENCODE chr19:16238786-16238899
64251 chr20 43547605 43547605 1 + C T LUSC 43547604 + 43547584 43547624 41 GCGGAGCTGGGGGCGCGGGCCCTGGAGTTCACCAACATCTA GCGGAGCTGGGGGCGCGGGCCTTGGAGTTCACCAACATCTA < 41bp 0.475733422570245 0.702891387419799 0.37488088 0.38374814 prediction 0.405782774839598 Functional Gain - PABPC1L ENSG00000101104 CDS Human protein_coding chr20:43547604 chr20:43547605 synonymous SNV . 0 22 hm5C_associated_SNPs_128331 0 0 1 PPIG POSTAR2 ENCODE chr20:43547558-43547610
64251 chr19 6746467 6746467 1 + T C STAD 6746464 + 6746444 6746484 41 CCCTCTACCCACCTTGCAGACAGTGGTGACCGAGGATTTTA CCCTCTACCCACCTTGCAGACAGCGGTGACCGAGGATTTTA < 41bp 0.483324345999373 0.702888191957985 0.222007 0.55294716 prediction 0.405776383915969 Functional Gain - TRIP10 ENSG00000125733 CDS Human protein_coding chr19:6746464 chr19:6746467 nonsynonymous SNV 0.997 2 24 hm5C_associated_SNPs_128334 0 0 6 PRPF8 POSTAR2 ENCODE chr19:6746460-6746518
64251 chr16 331850 331850 1 + C T rs114176225 331849 + 331829 331869 41 AGGAAGAGCCTCTTGGAGATCCGGCAGCTGGACCCGGACGA AGGAAGAGCCTCTTGGAGATCTGGCAGCTGGACCCGGACGA < 41bp 0.592965551249418 0.795846984792682 0.7818498 0.43372184 prediction 0.405762867086528 Functional Gain - ARHGDIG ENSG00000242173 CDS Human protein_coding chr16:331849 chr16:331850 nonsynonymous SNV 0.005 0 22 hm5C_associated_SNPs_128338 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:331820-331855
64251 chr17 37793437 37793437 1 + A G rs375903988 37793434 + 37793414 37793454 41 CGCTACTGAGGCCGCGGAGCCGGACTGCGGTTGGGGCGGGA CGCTACTGAGGCCGCGGAGCCGGGCTGCGGTTGGGGCGGGA < 41bp 0.615156504391433 0.818037447659544 0.8186015 0.9027748 prediction 0.405761886536223 Functional Gain - STARD3 ENSG00000131748 UTR5 Human protein_coding chr17:37793434 chr17:37793437 . . 0 24 hm5C_associated_SNPs_128339 0 0 7 DDX3X POSTAR2 ENCODE chr17:37793409-37793483
64251 chr5 135388602 135388602 1 + T A OV 135388598 + 135388578 135388618 41 AGTCTGTTTGGACCCCAGACCTGCTGAACAACCACATCTTG AGTCTGTTTGGACCCCAGACCTGCAGAACAACCACATCTTG < 41bp 0.366843473579986 0.702879930672363 0.6639707 0.27996504 prediction 0.405759861344726 Functional Gain - TGFBI ENSG00000120708 CDS Human protein_coding chr5:135388598 chr5:135388602 nonsynonymous SNV 0.992 5 25 hm5C_associated_SNPs_128340 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:135388601-135388627
64251 chr3 152553998 152553998 1 + A G COAD 152553995 + 152553975 152554015 41 TCTATGGCAGCATCTTGTTTCTGACATGCATCAGTGCCCAC TCTATGGCAGCATCTTGTTTCTGGCATGCATCAGTGCCCAC < 41bp 0.456562531454039 0.702877785381347 0.2316958 0.27702808 prediction 0.405755570762694 Functional Gain - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152553995 chr3:152553998 nonsynonymous SNV 0.867 2 24 hm5C_associated_SNPs_128343 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:152553960-152554000
64251 chr1 150413467 150413467 1 + A G LUAD 150413464 + 150413444 150413484 41 GGAAGATAGAAATGTATACCCAGAAGAAATGATTGTGGCAT GGAAGATAGAAATGTATACCCAGGAGAAATGATTGTGGCAT < 41bp 0.474924932362 0.702875782490006 0.50634956 0.88699347 prediction 0.405751564980011 Functional Gain - RPRD2 ENSG00000163125 CDS Human protein_coding chr1:150413464 chr1:150413467 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_128346 0 0 9 CPSF6 POSTAR2 GSE37401,GSM917665 chr1:150413434-150413492
64251 chr11 34160752 34160752 1 + A G LGG 34160749 + 34160729 34160769 41 GTTGCCCAGAATGACCTGACCGGAGAGCACTCGTGCATCAT GTTGCCCAGAATGACCTGACCGGGGAGCACTCGTGCATCAT < 41bp 0.62428243240231 0.827149709629 0.7074225 0.9132192 prediction 0.405734554453381 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34160749 chr11:34160752 synonymous SNV . 0 24 hm5C_associated_SNPs_128349 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:34160719-34160757
64251 chr16 67914622 67914622 1 + C T SKCM 67914621 + 67914601 67914641 41 ATTGCATCTGAGGCCCTGTCCCGTGGTTTTGGCTCCTCTGC ATTGCATCTGAGGCCCTGTCCTGTGGTTTTGGCTCCTCTGC < 41bp 0.45161414430651 0.702865506865456 0.8924023 0.43392918 prediction 0.405731013730911 Functional Gain - EDC4 ENSG00000038358 CDS Human protein_coding chr16:67914621 chr16:67914622 nonsynonymous SNV 0.999 3 22 hm5C_associated_SNPs_128350 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr16:67914610-67914640
64251 chr2 99812108 99812108 1 + T C rs7572157 99812105 + 99812085 99812125 41 TCTAACACGTGCCTCAAAAGCACTGGGGAGTTAGTAGTGCA TCTAACACGTGCCTCAAAAGCACCGGGGAGTTAGTAGTGCA < 41bp 0.577674039648129 0.780535231456751 0.10722628 0.14521518 prediction 0.405722383617244 Functional Gain - MRPL30 ENSG00000185414;ENSG00000241962 CDS Human other chr2:99812105 chr2:99812108 synonymous SNV . 0 24 hm5C_associated_SNPs_128351 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr2:99812084-99812109
64251 chr3 110790900 110790900 1 + T C UCEC 110790898 + 110790878 110790918 41 TGCGGCCGTCCCCGCTGTGTCCTGGAGGCGGCAAAGCACAA TGCGGCCGTCCCCGCTGTGTCCCGGAGGCGGCAAAGCACAA < 41bp 0.61165761624045 0.814517886720387 0.25891823 0.21635175 prediction 0.405720540959875 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110790898 chr3:110790900 synonymous SNV . 0 23 hm5C_associated_SNPs_128352 0 0 10 DDX3X POSTAR2 ENCODE chr3:110790841-110790905
64251 chr7 6628261 6628261 1 + C A UCEC 6628257 + 6628237 6628277 41 TCTGCTCCTAGTACCTGTTCCTGACTTTTCCACGGATTGTC TCTGCTCCTAGTACCTGTTCCTGAATTTTCCACGGATTGTC < 41bp 0.290396691088333 0.702850237216698 0.039531887 0.16436785 prediction 0.405700474433395 Functional Gain - ZDHHC4 ENSG00000136247 CDS Human protein_coding chr7:6628257 chr7:6628261 nonsynonymous SNV 0.596 3 25 hm5C_associated_SNPs_128357 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:6628245-6628283
64251 chrX 67756076 67756076 1 + C G rs186791465 67756075 + 67756055 67756095 41 GTCAGCAGTCAGTTCCATTCCCCCTTCATCCCAGCCTCTGG GTCAGCAGTCAGTTCCATTCCGCCTTCATCCCAGCCTCTGG < 41bp 0.436854615288251 0.70284448742698 0.050349057 0.057159632 prediction 0.405688974853959 Functional Gain - YIPF6 ENSG00000181704 UTR3 Human protein_coding chrX:67756075 chrX:67756076 . . 0 22 hm5C_associated_SNPs_128362 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:67756062-67756088
64251 chr9 312113 312113 1 + C T CESC 312112 + 312092 312132 41 GAGAAGCAGAACGAGGAGGCCCGGAGGACCAATAGGCAGGC GAGAAGCAGAACGAGGAGGCCTGGAGGACCAATAGGCAGGC < 41bp 0.578473782054677 0.781313255226134 0.5139377 0.528695 prediction 0.405678946342915 Functional Gain - DOCK8 ENSG00000107099 CDS Human protein_coding chr9:312112 chr9:312113 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_128364 0 0 1 UCHL5 POSTAR2 ENCODE chr9:312109-312178
64251 chr8 22474992 22474992 1 + C T SKCM 22474991 + 22474971 22475011 41 GGGAGAGGAAGAAGAAAAACCCCGGGGCGAGGCTTCTGAGG GGGAGAGGAAGAAGAAAAACCTCGGGGCGAGGCTTCTGAGG < 41bp 0.632575475759997 0.835414327581984 0.84918904 0.8653942 prediction 0.405677703643972 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22474991 chr8:22474992 synonymous SNV . 0 22 hm5C_associated_SNPs_128366 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr8:22474984-22475008
64251 chr1 110882201 110882201 1 + C T LUAD 110882200 + 110882180 110882220 41 GCCAGTGAAGGCCAAACGCTCCCGTGGTGGTGAGGACTCGA GCCAGTGAAGGCCAAACGCTCTCGTGGTGGTGAGGACTCGA < 41bp 0.477387835518407 0.702835025630111 0.14919254 0.11006579 prediction 0.405670051260222 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882200 chr1:110882201 synonymous SNV . 0 22 hm5C_associated_SNPs_128368 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:110882190-110882208
64251 chr22 40800432 40800432 1 + C T HNSC 40800431 + 40800411 40800451 41 GCTCCGCTCCCTGGTGCTGGCCGGCATCCCACATGGCATGA GCTCCGCTCCCTGGTGCTGGCTGGCATCCCACATGGCATGA < 41bp 0.459278784054391 0.702831823180791 0.4382972 0.29912466 prediction 0.405663646361583 Functional Gain - SGSM3 ENSG00000100359 CDS Human protein_coding chr22:40800431 chr22:40800432 synonymous SNV . 0 22 hm5C_associated_SNPs_128369 0 0 1 FBL POSTAR2 GSE43666,GSM1067865 chr22:40800404-40800444
64251 chr1 179033164 179033164 1 + C T LUAD 179033163 + 179033143 179033183 41 GATCTGTCACACTTTGGCTTCCAGATGTGTGGCCTCTGCAG GATCTGTCACACTTTGGCTTCTAGATGTGTGGCCTCTGCAG < 41bp 0.646689868983642 0.849519635102437 0.89870363 0.51478165 prediction 0.40565953223759 Functional Gain - FAM20B ENSG00000116199 CDS Human protein_coding chr1:179033163 chr1:179033164 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_128370 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr1:179033141-179033166
64251 chr10 54076337 54076337 1 + C A SARC 54076336 + 54076316 54076356 41 CAAGAAGGTTCTGTTTGTCTCCGGTCATCAGACTGTGCCTC CAAGAAGGTTCTGTTTGTCTCAGGTCATCAGACTGTGCCTC < 41bp 0.436896125087792 0.702827876246541 0.6256753 0.8838315 prediction 0.405655752493082 Functional Gain - DKK1 ENSG00000107984 CDS Human protein_coding chr10:54076336 chr10:54076337 synonymous SNV . 0 22 hm5C_associated_SNPs_128372 0 0 9 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54076320-54077260
64251 chr5 132387880 132387880 1 + C A rs553712217 132387876 + 132387856 132387896 41 CTGCTTTCCACTCGCTAGCCCCGCCGGGGGTCCGTGTCCTG CTGCTTTCCACTCGCTAGCCCCGCAGGGGGTCCGTGTCCTG < 41bp 0.386032012160959 0.702824137764288 0.096015155 0.18966436 prediction 0.405648275528576 Functional Gain - HSPA4 ENSG00000170606 UTR5 Human protein_coding chr5:132387876 chr5:132387880 . . 0 25 hm5C_associated_SNPs_128374 0 0 20 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:132387849-132387896
64251 chr3 47385252 47385252 1 + C T UCEC 47385251 + 47385231 47385271 41 CCCATGCACACGCGCAGGAGCCGGGTCTCCCTGGTGGCCAG CCCATGCACACGCGCAGGAGCTGGGTCTCCCTGGTGGCCAG < 41bp 0.605407795452108 0.80822981470779 0.90337044 0.59703463 prediction 0.405644038511363 Functional Gain - KLHL18 ENSG00000114648 CDS Human protein_coding chr3:47385251 chr3:47385252 nonsynonymous SNV 0.991 4 22 hm5C_associated_SNPs_128378 0 0 1 RBM15 POSTAR2 ENCODE chr3:47385251-47385327
64251 chr11 65688856 65688856 1 + C A UCEC 65688855 + 65688835 65688875 41 CTGCCTTTGCCCCCAGCGCCCCCGGGCCCCTCAGCACCTGA CTGCCTTTGCCCCCAGCGCCCACGGGCCCCTCAGCACCTGA < 41bp 0.638718905715623 0.841539661083251 0.10157564 0.20375031 prediction 0.405641510735256 Functional Gain - DRAP1 ENSG00000175550 CDS Human protein_coding chr11:65688855 chr11:65688856 nonsynonymous SNV 0.606 1 22 hm5C_associated_SNPs_128379 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:65688831-65688864
64251 chr20 34832693 34832693 1 + C T BLCA 34832692 + 34832672 34832712 41 TTTGAGCATTGGAAGCGGCTCCTGAACCTCCTGTGCCGGTC TTTGAGCATTGGAAGCGGCTCTTGAACCTCCTGTGCCGGTC < 41bp 0.436324511432677 0.702817755961773 0.22131535 0.19024014 prediction 0.405635511923546 Functional Gain - AAR2 ENSG00000131043 CDS Human protein_coding chr20:34832692 chr20:34832693 synonymous SNV . 0 22 hm5C_associated_SNPs_128382 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:34832656-34832694
64251 chr13 114286001 114286001 1 + C A GBM 114285997 + 114285977 114286017 41 CTGGTGGTAGGAAGCCCACACACCCCCAGCACTCACTTTGC CTGGTGGTAGGAAGCCCACACACCACCAGCACTCACTTTGC < 41bp 0.292119622229394 0.702809018045605 0.026088566 0.08010116 prediction 0.40561803609121 Functional Gain - TFDP1 ENSG00000198176 CDS Human protein_coding chr13:114285997 chr13:114286001 nonsynonymous SNV 0.992 4 25 hm5C_associated_SNPs_128387 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917664 chr13:114285975-114286002
64251 chr2 210880943 210880943 1 + C A rs77647855 210880939 + 210880919 210880959 41 TTGATACAGTCTTGCTCTGTCACCCAGGCTGAAGTGCAGTG TTGATACAGTCTTGCTCTGTCACCAAGGCTGAAGTGCAGTG < 41bp 0.294731081025283 0.702804435290978 0.018835604 0.15071568 prediction 0.405608870581955 Functional Gain - RPE ENSG00000197713 CDS Human protein_coding chr2:210880939 chr2:210880943 nonsynonymous SNV 0.001 0 25 hm5C_associated_SNPs_128391 0 0 3 U2AF1 POSTAR2 ENCODE chr2:210880926-210880973
64251 chr3 183898902 183898902 1 + C T GBM 183898901 + 183898881 183898921 41 CTGAGTGCCCATGTGTCGGGCCGGGTGGTGATGAAGAGCTA CTGAGTGCCCATGTGTCGGGCTGGGTGGTGATGAAGAGCTA < 41bp 0.619624296591739 0.822427749913842 0.46696553 0.470093 prediction 0.405606906644206 Functional Gain - AP2M1 ENSG00000161203 CDS Human protein_coding chr3:183898901 chr3:183898902 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_128393 0 0 12 TARDBP POSTAR2 DRA001158,DRS012386 chr3:183898870-183898989
64251 chr2 198318374 198318374 1 + C T COAD 198318373 + 198318353 198318393 41 AGCGGCCGGGGCGCAGGCGCCCGTGCGGAATGGCAGGTAAT AGCGGCCGGGGCGCAGGCGCCTGTGCGGAATGGCAGGTAAT < 41bp 0.488907157614675 0.702802371504446 0.56076854 0.57168823 prediction 0.405604743008892 Functional Gain - COQ10B ENSG00000115520 CDS Human protein_coding chr2:198318373 chr2:198318374 synonymous SNV . 0 22 hm5C_associated_SNPs_128395 0 0 3 DDX3X POSTAR2 ENCODE chr2:198318297-198318374
64251 chr18 13752398 13752398 1 + T C UCEC 13752396 + 13752376 13752416 41 TATGAACATGCAGCAAAGTACATGAAGAACAGTCAAGTAAG TATGAACATGCAGCAAAGTACACGAAGAACAGTCAAGTAAG < 41bp 0.484113736778981 0.702799706218672 0.017598659 0.04216683 prediction 0.405599412437345 Functional Gain - RNMT ENSG00000101654 CDS Human protein_coding chr18:13752396 chr18:13752398 nonsynonymous SNV 0.998 0 23 hm5C_associated_SNPs_128398 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chr18:13752335-13752400
64251 chr16 88781040 88781040 1 + A G rs8059048 88781037 + 88781017 88781057 41 TCAGACCTCCTCGCGTCTCTCCCAGATGCAGTCACCCATCC TCAGACCTCCTCGCGTCTCTCCCGGATGCAGTCACCCATCC < 41bp 0.624681437576422 0.827480032295335 0.18482661 0.84473073 prediction 0.405597189437825 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781037 chr16:88781040 nonsynonymous SNV 0.063 1 24 hm5C_associated_SNPs_128400 0 0 1 EFTUD2 POSTAR2 ENCODE chr16:88781018-88781052
64251 chr21 45745937 45745937 1 + C T LUAD 45745936 + 45745916 45745956 41 GAGAAGCTGCGCGAGGTTTACCGCAAGGGTAGGTGGTGGGT GAGAAGCTGCGCGAGGTTTACTGCAAGGGTAGGTGGTGGGT < 41bp 0.648679876648483 0.851473122132479 0.37041837 0.35163614 prediction 0.405586490967993 Functional Gain - PFKL ENSG00000141959 CDS Human protein_coding chr21:45745936 chr21:45745937 nonsynonymous SNV 0.965 4 22 hm5C_associated_SNPs_128404 0 0 6 LSM11 POSTAR2 ENCODE chr21:45745891-45745944
64251 chr1 15386778 15386778 1 + C T COAD 15386777 + 15386757 15386797 41 GACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAA GACATCAACTCCCCTCGACACTGGACACACTCCCTCTGCAA < 41bp 0.617920155785863 0.820704538008533 0.15543988 0.077509105 prediction 0.40556876444534 Functional Gain - KAZN ENSG00000189337 CDS Human protein_coding chr1:15386777 chr1:15386778 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_128406 0 0 4 GRWD1 POSTAR2 ENCODE chr1:15386764-15386810
64251 chr5 150647267 150647267 1 + C T rs75026189 150647266 + 150647246 150647286 41 GGGCTGACCACGTTACTCATCCCCGTTAACATTCTCTCTAA GGGCTGACCACGTTACTCATCTCCGTTAACATTCTCTCTAA < 41bp 0.587325711702523 0.790083333048623 0.10813892 0.1650438 prediction 0.4055152426922 Functional Gain - GM2A ENSG00000196743 UTR3 Human protein_coding chr5:150647266 chr5:150647267 . . 0 22 hm5C_associated_SNPs_128420 1 0 9 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:150647237-150647270
64251 chr6 37414178 37414178 1 + C T SKCM 37414177 + 37414157 37414197 41 AGAGGCTTGGGTCTGACACTCCGGGGCTTTGACCAGGAGCT AGAGGCTTGGGTCTGACACTCTGGGGCTTTGACCAGGAGCT < 41bp 0.628103556070148 0.830855103204936 0.90053105 0.8899398 prediction 0.405503094269577 Functional Gain - CMTR1 ENSG00000137200 CDS Human protein_coding chr6:37414177 chr6:37414178 nonsynonymous SNV 0.979 1 22 hm5C_associated_SNPs_128425 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:37414171-37414192
64251 chr19 10225777 10225777 1 + A G rs7401 10225774 + 10225754 10225794 41 CAAGGGTCCCGGACCGAGTACACAGTGGCAGCTGGCTTAGT CAAGGGTCCCGGACCGAGTACACGGTGGCAGCTGGCTTAGT < 41bp 0.589247601302336 0.791996343033184 0.15303868 0.294065 prediction 0.405497483461696 Functional Gain - EIF3G;P2RY11;PPAN-P2RY11 ENSG00000130811;ENSG00000244165 UTR3 Human other chr19:10225774 chr19:10225777 . . 0 24 hm5C_associated_SNPs_128428 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:10225734-10225797
64251 chr2 120003077 120003077 1 + C T SKCM 120003076 + 120003056 120003096 41 CTCTTGCAGCCACCAAAATGCCAGAAGAGATGGACAAGCCA CTCTTGCAGCCACCAAAATGCTAGAAGAGATGGACAAGCCA < 41bp 0.450158881220648 0.702748493539764 0.29348183 0.69329077 prediction 0.405496987079528 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120003076 chr2:120003077 nonsynonymous SNV 0.554 0 22 hm5C_associated_SNPs_128429 0 0 4 CPSF6 POSTAR2 GSE37401,GSM917665 chr2:120003074-120003100
64251 chr19 54963340 54963340 1 + C A UCEC 54963339 + 54963319 54963359 41 GAGACGCCGATGCACGAGAACCCGGAGTGGGAGAAGGCCCG GAGACGCCGATGCACGAGAACACGGAGTGGGAGAAGGCCCG < 41bp 0.437597839939606 0.702743798239641 0.25797617 0.33294335 prediction 0.405487596479281 Functional Gain - LENG8 ENSG00000167615 CDS Human protein_coding chr19:54963339 chr19:54963340 nonsynonymous SNV 0.983 4 22 hm5C_associated_SNPs_128432 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:54963328-54963381
64251 chr8 26265596 26265596 1 + T C COAD 26265593 + 26265573 26265613 41 GACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATTCC GACTGGGTATCAGACTGGTCCAGCAGACCCGAAAACATTCC < 41bp 0.569008262515777 0.771745176318517 0.20481172 0.309537 prediction 0.40547382760548 Functional Gain - BNIP3L ENSG00000104765 CDS Human protein_coding chr8:26265593 chr8:26265596 stoploss . 0 24 hm5C_associated_SNPs_128435 0 0 7 BUD13 POSTAR2 ENCODE chr8:26265510-26265630
64251 chr19 3612283 3612283 1 - G A BLCA 3612284 - 3612264 3612304 41 TACCTGTGGGCCGACAAGTACCGGCCACGCAAGCCGCGCTT TACCTGTGGGCCGACAAGTACTGGCCACGCAAGCCGCGCTT < 41bp 0.466330642493871 0.702736231763559 0.7346788 0.8081414 prediction 0.405472463527119 Functional Gain - CACTIN ENSG00000105298 CDS Human protein_coding chr19:3612284 chr19:3612283 nonsynonymous SNV 0.995 3 22 hm5C_associated_SNPs_128438 0 0 1 ZNF622 POSTAR2 ENCODE chr19:3612214-3612309
64251 chr20 33508826 33508826 1 + A G rs10485507 33508823 + 33508803 33508843 41 GGTCAGTTTGAGGGGATTCCCACATATCCGGACGTGAACCG GGTCAGTTTGAGGGGATTCCCACGTATCCGGACGTGAACCG < 41bp 0.600211046151892 0.802947198442482 0.6105461 0.31273967 prediction 0.40547230458118 Functional Gain - ACSS2 ENSG00000131069 CDS Human protein_coding chr20:33508823 chr20:33508826 synonymous SNV . 0 24 hm5C_associated_SNPs_128440 0 0 5 DDX24 POSTAR2 ENCODE chr20:33508817-33508862
64251 chr17 20109123 20109123 1 + C T COAD 20109122 + 20109102 20109142 41 TCAAGAAATGTTGAAAGTAGCCCGAGCAGAGAAAGATCTAC TCAAGAAATGTTGAAAGTAGCTCGAGCAGAGAAAGATCTAC < 41bp 0.446753824871938 0.70273563822916 0.12969887 0.15009779 prediction 0.405471276458319 Functional Gain - SPECC1 ENSG00000128487 CDS Human protein_coding chr17:20109122 chr17:20109123 synonymous SNV . 0 22 hm5C_associated_SNPs_128441 0 0 7 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr17:20109100-20109140
64251 chr4 48027184 48027184 1 + T C GBM 48027182 + 48027162 48027202 41 TCTCCTGTGCTCTACACGGACCTGAATTACAGCATAAACAA TCTCCTGTGCTCTACACGGACCCGAATTACAGCATAAACAA < 41bp 0.411562196431711 0.702730089436004 0.04153359 0.03469935 prediction 0.405460178872008 Functional Gain - NIPAL1 ENSG00000163293 CDS Human protein_coding chr4:48027182 chr4:48027184 nonsynonymous SNV 0.903 0 23 hm5C_associated_SNPs_128444 0 0 2 DDX3X POSTAR2 ENCODE chr4:48027136-48027192
64251 chr19 58966903 58966903 1 + T A KIRP 58966901 + 58966881 58966921 41 GACGCCTGAGCGGCAGAAGCCATGTGCACAGGAGGTCCCTG GACGCCTGAGCGGCAGAAGCCAAGTGCACAGGAGGTCCCTG < 41bp 0.547137243208736 0.749860600685728 0.43166053 0.91074103 prediction 0.405446714953984 Functional Gain - ZNF324B ENSG00000249471 CDS Human protein_coding chr19:58966901 chr19:58966903 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_128447 0 0 2 RBM15B POSTAR2 GSE78030,GSM2064711 chr19:58966900-58966920
64251 chr17 12016635 12016635 1 + T C KIRP 12016632 + 12016612 12016652 41 ATCAGTGGACAGCTTGTGGACTCTATTGCCAAGACAAGAGA ATCAGTGGACAGCTTGTGGACTCCATTGCCAAGACAAGAGA < 41bp 0.616310512696993 0.819028379309438 0.8205379 0.9460568 prediction 0.40543573322489 Functional Gain - MAP2K4 ENSG00000065559 CDS Human protein_coding chr17:12016632 chr17:12016635 synonymous SNV . 0 24 hm5C_associated_SNPs_128448 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:12016571-12016641
64251 chr1 150902504 150902504 1 + C T CESC 150902503 + 150902483 150902523 41 TCCAAGCTGGGACTACAATACCGGGACAGTAGCTCTGAGGA TCCAAGCTGGGACTACAATACTGGGACAGTAGCTCTGAGGA < 41bp 0.632995663508828 0.835709420664555 0.9265815 0.9100945 prediction 0.405427514311453 Functional Gain - SETDB1 ENSG00000143379 CDS Human protein_coding chr1:150902503 chr1:150902504 nonsynonymous SNV 0.542 2 22 hm5C_associated_SNPs_128449 0 0 10 FUS POSTAR2 DRA001158,DRS012384 chr1:150902470-150902525
64251 chr5 132202694 132202694 1 + C T LUAD 132202693 + 132202673 132202713 41 GGAATCCCCAATGTTCTGCGCCGCATTCGGGAGTCTTTCTT GGAATCCCCAATGTTCTGCGCTGCATTCGGGAGTCTTTCTT < 41bp 0.61169481933363 0.814404565001744 0.10738817 0.19477186 prediction 0.405419491336227 Functional Gain - UQCRQ ENSG00000164405 CDS Human protein_coding chr5:132202693 chr5:132202694 nonsynonymous SNV 0.143 5 22 hm5C_associated_SNPs_128451 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819212 chr5:132202560-132202700
64251 chr1 55523739 55523739 1 + C A OV 55523738 + 55523718 55523758 41 CCATGATGCTGTCTGCCGAGCCGGAGCTCACCCTGGCCGAG CCATGATGCTGTCTGCCGAGCAGGAGCTCACCCTGGCCGAG < 41bp 0.658042389851404 0.860750177067233 0.8817835 0.9046271 prediction 0.405415574431658 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55523738 chr1:55523739 nonsynonymous SNV 0.025 2 22 hm5C_associated_SNPs_128452 0 0 11 DDX24 POSTAR2 ENCODE chr1:55523718-55523762
64251 chr11 68700734 68700734 1 + C A rs73527332 68700730 + 68700710 68700750 41 CACACCTGGACTCTGGGGCTCAGGCCTGCCTTCCCCCTTTC CACACCTGGACTCTGGGGCTCAGGACTGCCTTCCCCCTTTC < 41bp 0.346125813229785 0.702705900598175 0.8821087 0.9144993 prediction 0.405411801196349 Functional Gain - IGHMBP2 ENSG00000132740 intronic Human protein_coding chr11:68700730 chr11:68700734 . . 0 25 hm5C_associated_SNPs_128454 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:68700720-68700736
64251 chr15 42108791 42108791 1 + A G UCEC 42108788 + 42108768 42108808 41 TTCAGTCCCTGAGTGAGATGCTGAAGGTGGAGGCCCATGAC TTCAGTCCCTGAGTGAGATGCTGGAGGTGGAGGCCCATGAC < 41bp 0.511261866038296 0.713963414386164 0.8291439 0.883195 prediction 0.405403096695735 Functional Gain - MAPKBP1 ENSG00000137802 CDS Human protein_coding chr15:42108788 chr15:42108791 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_128458 0 0 2 CPSF6 POSTAR2 GSE37401,GSM917664 chr15:42108771-42108805
64251 chr12 58139594 58139594 1 + C A LGG 58139593 + 58139573 58139613 41 CTGGGTCTGGTGTCCAGCATCCACATCATCGGCGGAGTCAT CTGGGTCTGGTGTCCAGCATCAACATCATCGGCGGAGTCAT < 41bp 0.641776344061522 0.844476803752938 0.107542485 0.06342319 prediction 0.405400919382833 Functional Gain - TSPAN31 ENSG00000135452 CDS Human protein_coding chr12:58139593 chr12:58139594 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_128459 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:58139575-58139597
64251 chr16 22092319 22092319 1 + A G rs140660225 22092316 + 22092296 22092336 41 AGGCCTCTCATGGGAAGATGCTCAGATGAAACTGATGCTGA AGGCCTCTCATGGGAAGATGCTCGGATGAAACTGATGCTGA < 41bp 0.478022903385903 0.702699897054994 0.6179122 0.68111074 prediction 0.405399794109987 Functional Gain - C16orf52 ENSG00000185716 UTR3 Human protein_coding chr16:22092316 chr16:22092319 . . 0 24 hm5C_associated_SNPs_128460 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714641 chr16:22092298-22092372
64251 chr17 42800312 42800312 1 + C A rs62636632 42800311 + 42800291 42800331 41 TGCCAGGAAGCATCCCTTTTCCGGAAAGTCCTTTTACTTGG TGCCAGGAAGCATCCCTTTTCAGGAAAGTCCTTTTACTTGG < 41bp 0.617692046181064 0.82039064229582 0.26705378 0.8672745 prediction 0.405397192229511 Functional Gain - DBF4B ENSG00000161692 CDS Human protein_coding chr17:42800311 chr17:42800312 synonymous SNV . 0 22 hm5C_associated_SNPs_128461 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:42800289-42800325
64251 chr16 46963408 46963408 1 + C T rs190320385 46963407 + 46963387 46963427 41 GGGGCTGAGAAAGGGTCCGCCCGGTGGCCTGGAGGCAGGCG GGGGCTGAGAAAGGGTCCGCCTGGTGGCCTGGAGGCAGGCG < 41bp 0.53892010388991 0.741615709761639 0.5653052 0.36470854 prediction 0.405391211743457 Functional Gain - GPT2 ENSG00000166123 UTR3 Human protein_coding chr16:46963407 chr16:46963408 . . 0 22 hm5C_associated_SNPs_128464 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr16:46963397-46963442
64251 chr16 57416243 57416243 1 + T C STAD 57416241 + 57416221 57416261 41 GCCGACGGGCGTGACTGGTTCCTCAGGGACCAGGCTCCCCC GCCGACGGGCGTGACTGGTTCCCCAGGGACCAGGCTCCCCC < 41bp 0.647753908619831 0.850444972867474 0.1335322 0.19200927 prediction 0.405382128495287 Functional Gain - CX3CL1 ENSG00000006210 CDS Human protein_coding chr16:57416241 chr16:57416243 nonsynonymous SNV 0.001 0 23 hm5C_associated_SNPs_128466 0 0 3 RPS3 POSTAR2 ENCODE chr16:57416160-57416273
64251 chrX 77378799 77378799 1 + T C COAD 77378796 + 77378776 77378816 41 ACCTTGCCTGTTGACTTTGTCACTGCTGACAAGTTTGATGA ACCTTGCCTGTTGACTTTGTCACCGCTGACAAGTTTGATGA < 41bp 0.478727490502122 0.702686356415055 0.34515518 0.3950351 prediction 0.40537271283011 Functional Gain - PGK1 ENSG00000102144 CDS Human protein_coding chrX:77378796 chrX:77378799 synonymous SNV . 0 24 hm5C_associated_SNPs_128468 0 0 25 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:77378720-77378800
64251 chr18 77894189 77894189 1 + A G LUAD 77894186 + 77894166 77894206 41 TTGCTTCCATCTTGCTTTGCCACAGAACAGTCCAAGCCCAG TTGCTTCCATCTTGCTTTGCCACGGAACAGTCCAAGCCCAG < 41bp 0.452885271440277 0.702684547694119 0.1588116 0.33246687 prediction 0.405369095388239 Functional Gain - ADNP2 ENSG00000101544 CDS Human protein_coding chr18:77894186 chr18:77894189 nonsynonymous SNV 0.033 1 24 hm5C_associated_SNPs_128470 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr18:77894169-77894189
64251 chr14 29237758 29237758 1 + T C ESCA 29237756 + 29237736 29237776 41 TTTCCCCCACGTCCCGCACCCGTCAATGACTTCGCAGAGCA TTTCCCCCACGTCCCGCACCCGCCAATGACTTCGCAGAGCA < 41bp 0.666796629977659 0.869476094667261 0.07003525 0.4100956 prediction 0.405358929379203 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237756 chr14:29237758 nonsynonymous SNV 1.000 2 23 hm5C_associated_SNPs_128475 1 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr14:29237720-29237760
64251 chr9 139888279 139888279 1 + C T rs563750403 139888278 + 139888258 139888298 41 AGGTGCAGCACAAGCGTGGCCCCGCGGGGAGTCCGCCTATG AGGTGCAGCACAAGCGTGGCCTCGCGGGGAGTCCGCCTATG < 41bp 0.553801796623323 0.75647887261199 0.31233075 0.3463232 prediction 0.405354151977335 Functional Gain - C9orf142 ENSG00000148362 UTR3 Human protein_coding chr9:139888278 chr9:139888279 . . 0 22 hm5C_associated_SNPs_128476 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:139888229-139888366
64251 chr6 71298383 71298383 1 + C T UCEC 71298382 + 71298362 71298402 41 CCCAGGGGCCCAGAACCTACCCGATATGGAGATTGGGAACG CCCAGGGGCCCAGAACCTACCTGATATGGAGATTGGGAACG < 41bp 0.464852128432484 0.702675353030058 0.07250205 0.08096668 prediction 0.405350706060116 Functional Gain - SDHAF4 ENSG00000154079 CDS Human protein_coding chr6:71298382 chr6:71298383 stopgain 0.998 1 22 hm5C_associated_SNPs_128478 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:71298379-71298402
64251 chr2 27258152 27258152 1 + T C GBM 27258150 + 27258130 27258170 41 CCACGCTGAGCCAGCATACTCATGGTAAGTCCTTCCAGCTT CCACGCTGAGCCAGCATACTCACGGTAAGTCCTTCCAGCTT < 41bp 0.651031505630218 0.853700011258225 0.9167681 0.82741743 prediction 0.405337011256014 Functional Gain - TMEM214 ENSG00000119777 CDS Human protein_coding chr2:27258150 chr2:27258152 synonymous SNV . 0 23 hm5C_associated_SNPs_128481 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:27258114-27258152
64251 chr18 32438296 32438296 1 + C G LUSC 32438292 + 32438272 32438312 41 GACTTCGGCTAGAGCATGAACAAGCTTCTCAGCCCACGCCA GACTTCGGCTAGAGCATGAACAAGGTTCTCAGCCCACGCCA < 41bp 0.644366112565855 0.847032529686425 0.27792224 0.884526 prediction 0.40533283424114 Functional Gain - DTNA ENSG00000134769 CDS Human protein_coding chr18:32438292 chr18:32438296 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_128482 0 0 1 BUD13 POSTAR2 ENCODE chr18:32438198-32438342
64251 chr7 5085976 5085976 1 + C G rs374214716 5085975 + 5085955 5085995 41 CGCGCGCCAGCGACAGCAGCCCCGCCCCGGCCTCTCGGGAG CGCGCGCCAGCGACAGCAGCCGCGCCCCGGCCTCTCGGGAG < 41bp 0.465356556219889 0.702664162121979 0.348284 0.48161164 prediction 0.405328324243958 Functional Gain - RBAK ENSG00000146587 UTR5 Human protein_coding chr7:5085975 chr7:5085976 . . 0 22 hm5C_associated_SNPs_128485 0 0 1 SRSF1 POSTAR2 ENCODE chr7:5085927-5086034
64251 chr6 349459 349459 1 + C T rs572771834 349458 + 349438 349478 41 AAGGCATTTGAGCTCGACCTCCGAAAAGCTACCCAGCAAAG AAGGCATTTGAGCTCGACCTCTGAAAAGCTACCCAGCAAAG < 41bp 0.556034256836955 0.758692321951667 0.38063788 0.2742147 prediction 0.405316130229424 Functional Gain - DUSP22 ENSG00000112679 UTR3 Human protein_coding chr6:349458 chr6:349459 . . 0 22 hm5C_associated_SNPs_128487 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:349428-349470
64251 chr3 12858878 12858878 1 + C T SKCM 12858877 + 12858857 12858897 41 CAGCCCTCTCAGCTGCCTGTCCCCAAGAGGCGGCAAGCACA CAGCCCTCTCAGCTGCCTGTCTCCAAGAGGCGGCAAGCACA < 41bp 0.418480574354901 0.702650095501065 0.06707227 0.9529543 prediction 0.40530019100213 Functional Gain - CAND2 ENSG00000144712 CDS Human protein_coding chr3:12858877 chr3:12858878 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_128488 0 0 1 RBM15 POSTAR2 ENCODE chr3:12858841-12858878
64251 chr10 115661517 115661517 1 + A G SKCM 115661514 + 115661494 115661534 41 TCCTCACAAGGCAGGTTTTGCCCAACCTTCAGGCCTTTCCT TCCTCACAAGGCAGGTTTTGCCCGACCTTCAGGCCTTTCCT < 41bp 0.46135262865556 0.702637284055499 0.084074706 0.30246246 prediction 0.405274568110997 Functional Gain - NHLRC2 ENSG00000196865 CDS Human protein_coding chr10:115661514 chr10:115661517 nonsynonymous SNV 0.902 5 24 hm5C_associated_SNPs_128495 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:115661513-115661543
64251 chr16 57496641 57496641 1 + C T BLCA 57496640 + 57496620 57496660 41 GGTGGCCCCTGGGCGAGATGCCGTACGCCAACCAGCCTACC GGTGGCCCCTGGGCGAGATGCTGTACGCCAACCAGCCTACC < 41bp 0.575081330514101 0.777717675693325 0.50902665 0.76479656 prediction 0.405272690358449 Functional Gain - POLR2C ENSG00000102978 CDS Human protein_coding chr16:57496640 chr16:57496641 nonsynonymous SNV 0.975 4 22 hm5C_associated_SNPs_128496 0 0 16 DDX3X POSTAR2 GSE70804,GSM1819215 chr16:57496600-57496660
64251 chr19 58262191 58262191 1 + C T rs149749249 58262190 + 58262170 58262210 41 AGATGTGGCTGTGAACTTTTCCCAGGAGGAATGGAGTCTCC AGATGTGGCTGTGAACTTTTCTCAGGAGGAATGGAGTCTCC < 41bp 0.447317088420486 0.702624694185128 0.09901634 0.024009168 prediction 0.405249388370257 Functional Gain - ZNF776 ENSG00000152443;ENSG00000269026 CDS Human other chr19:58262190 chr19:58262191 synonymous SNV . 0 22 hm5C_associated_SNPs_128499 0 0 3 SRSF1 POSTAR2 GSE83923,GSM2221667 chr19:58262180-58262200
64251 chr20 33122537 33122537 1 + C T SKCM 33122536 + 33122516 33122556 41 GCACCGTGCGTGACATCGACCCCCAGAACGATCTCACCTTC GCACCGTGCGTGACATCGACCTCCAGAACGATCTCACCTTC < 41bp 0.637875979802301 0.840483275166075 0.009237021 0.28001994 prediction 0.405214590727549 Functional Gain - DYNLRB1 ENSG00000125971 CDS Human protein_coding chr20:33122536 chr20:33122537 nonsynonymous SNV 0.997 4 22 hm5C_associated_SNPs_128508 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr20:33122517-33122540
64251 chr17 47926071 47926071 1 + C G rs575081265 47926067 + 47926047 47926087 41 AGAAAAATGGCTGCAGGTTTCAAGCGTCATTGGCTCTAAGT AGAAAAATGGCTGCAGGTTTCAAGGGTCATTGGCTCTAAGT < 41bp 0.580362906789827 0.782962583591624 0.4877366 0.9296839 prediction 0.405199353603594 Functional Gain - FLJ45513 ENSG00000204584 ncRNA_exonic Human antisense chr17:47926067 chr17:47926071 . . 0 25 hm5C_associated_SNPs_128510 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47926066-47926105
64251 chr5 138666566 138666566 1 + A G rs79616595 138666563 + 138666543 138666583 41 GTGGCACAGTTCTCTGCAACCTCAGCCTTTGGGCTCAAATG GTGGCACAGTTCTCTGCAACCTCGGCCTTTGGGCTCAAATG < 41bp 0.489283214049917 0.702598543803594 0.24607614 0.51590484 prediction 0.405197087607188 Functional Gain - MATR3 ENSG00000015479 UTR3 Human protein_coding chr5:138666563 chr5:138666566 . . 0 24 hm5C_associated_SNPs_128511 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350199 chr5:138666527-138666576
64251 chr1 1417600 1417600 1 + C T SARC 1417599 + 1417579 1417619 41 GGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACA GGCCCGGGCGCGCGCCAAGGCTGAGCGGGAGAATGCAGACA < 41bp 0.454743743827471 0.702597221796289 0.42182493 0.15612781 prediction 0.405194443592577 Functional Gain - ATAD3B ENSG00000160072 CDS Human protein_coding chr1:1417599 chr1:1417600 synonymous SNV . 0 22 hm5C_associated_SNPs_128512 0 0 8 DDX24 POSTAR2 ENCODE chr1:1417536-1417669
64251 chr17 28958829 28958829 1 + C T rs113224396 28958828 + 28958808 28958848 41 TTCATGAAGATGTTACAAGCCCGGAAGCAGCACATGAGCAC TTCATGAAGATGTTACAAGCCTGGAAGCAGCACATGAGCAC < 41bp 0.582535816995791 0.785114460127959 0.113461435 0.10615268 prediction 0.405157286264336 Functional Gain - LOC107133515 ENSG00000214719;ENSG00000250462 ncRNA_exonic Human other chr17:28958828 chr17:28958829 . . 0 22 hm5C_associated_SNPs_128516 0 0 2 DDX59 POSTAR2 ENCODE chr17:28958760-28958842
64251 chr15 78841353 78841353 1 + T C rs1052035 78841350 + 78841330 78841370 41 AAAGCAGTCCTACTCTTCCACACTAGGAAGGCTTTACTTTT AAAGCAGTCCTACTCTTCCACACCAGGAAGGCTTTACTTTT < 41bp 0.502241297093748 0.704818560597686 0.105823606 0.113399684 prediction 0.405154527007877 Functional Gain - PSMA4 ENSG00000041357 UTR3 Human protein_coding chr15:78841350 chr15:78841353 . . 0 24 hm5C_associated_SNPs_128517 0 0 31 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr15:78841280-78841380
64251 chr1 46035621 46035621 1 + C T rs142530083 46035620 + 46035600 46035640 41 CTCTGTACCCCTTTAATGACCCGTACTGAGACCACAGCTTC CTCTGTACCCCTTTAATGACCTGTACTGAGACCACAGCTTC < 41bp 0.453922785309698 0.702576804837234 0.074070364 0.18282002 prediction 0.405153609674467 Functional Gain - AKR1A1 ENSG00000117448 CDS Human protein_coding chr1:46035620 chr1:46035621 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_128518 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:46035582-46035622
64251 chr3 186760679 186760679 1 + T C COAD 186760676 + 186760656 186760696 41 CATGGGGTCTGATTCCCAGTCTGTATCCTCAAGCAGCACCC CATGGGGTCTGATTCCCAGTCTGCATCCTCAAGCAGCACCC < 41bp 0.568898528145425 0.771475285492555 0.18881819 0.23839056 prediction 0.40515351469426 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186760676 chr3:186760679 nonsynonymous SNV 0.023 0 24 hm5C_associated_SNPs_128519 0 0 4 DDX3X POSTAR2 ENCODE chr3:186760651-186760729
64251 chr9 132572290 132572290 1 + C T rs191156923 132572289 + 132572269 132572309 41 CTTCACACTTAATGTACTGACCGAGACAGAAGTACCTGAAA CTTCACACTTAATGTACTGACTGAGACAGAAGTACCTGAAA < 41bp 0.506617323228339 0.709192899077619 0.30344748 0.08232179 prediction 0.40515115169856 Functional Gain - TOR1B ENSG00000136816 UTR3 Human protein_coding chr9:132572289 chr9:132572290 . . 0 22 hm5C_associated_SNPs_128521 0 0 7 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:132572252-132572290
64251 chr14 23314992 23314992 1 + C T LUSC 23314991 + 23314971 23315011 41 TGAAGGTAGAACCGGGCTACCCCAAGTCAGCCCTGAGGGAC TGAAGGTAGAACCGGGCTACCTCAAGTCAGCCCTGAGGGAC < 41bp 0.648651658047559 0.851226368472321 0.2536533 0.762612 prediction 0.405149420849525 Functional Gain - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23314991 chr14:23314992 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_128522 0 0 1 DDX24 POSTAR2 ENCODE chr14:23314972-23315036
64251 chr11 8111748 8111748 1 + C T SKCM 8111747 + 8111727 8111767 41 GCCCCCCTGGTGGAGTCCTACCTCAGCAGCAGTGGCAGCAC GCCCCCCTGGTGGAGTCCTACTTCAGCAGCAGTGGCAGCAC < 41bp 0.421500866326598 0.702574464738121 0.08194795 0.16558334 prediction 0.405148929476242 Functional Gain - TUB ENSG00000166402 CDS Human protein_coding chr11:8111747 chr11:8111748 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_128523 0 0 2 BUD13 POSTAR2 ENCODE chr11:8111644-8111774
64251 chr11 60696265 60696265 1 + A G COAD 60696262 + 60696242 60696282 41 GACCCTGGGGAGCAGGCCCTCCCAGTGGGGGGTGTGGAGCT GACCCTGGGGAGCAGGCCCTCCCGGTGGGGGGTGTGGAGCT < 41bp 0.448369081547163 0.70257367953368 0.33006552 0.44529003 prediction 0.40514735906736 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60696262 chr11:60696265 synonymous SNV . 0 24 hm5C_associated_SNPs_128524 0 0 1 RPS3 POSTAR2 ENCODE chr11:60696194-60696329
64251 chr1 204095019 204095019 1 + A G UCEC 204095016 + 204094996 204095036 41 GGCCAGGTGCAGATGAGCTCCTCAGATGTCCTGTACCCTCG GGCCAGGTGCAGATGAGCTCCTCGGATGTCCTGTACCCTCG < 41bp 0.614994303039666 0.81756100942477 0.23870862 0.5045905 prediction 0.405133412770208 Functional Gain - SOX13 ENSG00000143842 CDS Human protein_coding chr1:204095016 chr1:204095019 synonymous SNV . 0 24 hm5C_associated_SNPs_128526 0 0 2 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr1:204095019-204095020
64251 chr10 45488943 45488943 1 + C G rs3814569 45488940 + 45488920 45488960 41 AGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGA AGCACCATGATTCCCACAGCCAGGTCTTGGCTCCAAGATGA < 41bp 0.508663014395834 0.711221310633408 0.021143287 0.1533173 prediction 0.405116592475148 Functional Gain - RASSF4 ENSG00000107551 UTR3 Human protein_coding chr10:45488940 chr10:45488943 . . 0 24 hm5C_associated_SNPs_128530 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:45488928-45488966
64251 chr7 92085780 92085780 1 + C T SKCM 92085779 + 92085759 92085799 41 GTCACGGTCATCACCATTTCCCACAGTTCCCACCAGACCAG GTCACGGTCATCACCATTTCCTACAGTTCCCACCAGACCAG < 41bp 0.643314018559139 0.845871780724251 0.04318446 0.07347229 prediction 0.405115524330224 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92085779 chr7:92085780 synonymous SNV . 0 22 hm5C_associated_SNPs_128532 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:92085743-92085781
64251 chr11 70281285 70281285 1 + C G rs185470349 70281284 + 70281264 70281304 41 AGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCTGGATC AGTAGGGCCCCCAGCCCCCCCGCGGAGCTGCGCCCTGGATC < 41bp 0.696559773728074 0.899116897011219 0.21463287 0.7503511 prediction 0.40511424656629 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281284 chr11:70281285 . . 0 22 hm5C_associated_SNPs_128533 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr18 19100717 19100717 1 + T C rs17720074 19100714 + 19100694 19100734 41 AACTGTGAAGGGGTGTTTTTCAGTGGACTCCTTTTGTACCT AACTGTGAAGGGGTGTTTTTCAGCGGACTCCTTTTGTACCT < 41bp 0.535805555831725 0.738356829162894 0.92071724 0.9499912 prediction 0.405102546662337 Functional Gain - GREB1L ENSG00000141449 CDS Human protein_coding chr18:19100714 chr18:19100717 synonymous SNV . 0 24 hm5C_associated_SNPs_128537 0 0 1 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr18:19100698-19100719
64251 chr3 88199286 88199286 1 + C T ESCA 88199285 + 88199265 88199305 41 GGACAACGACGAGATCATGGCCCTATGCGACACTGTCACCA GGACAACGACGAGATCATGGCTCTATGCGACACTGTCACCA < 41bp 0.610394041113327 0.812938736741581 0.16139466 0.9514955 prediction 0.405089391256509 Functional Gain - C3orf38 ENSG00000179021 CDS Human protein_coding chr3:88199285 chr3:88199286 synonymous SNV . 0 22 hm5C_associated_SNPs_128538 0 0 3 DDX3X POSTAR2 ENCODE chr3:88199134-88199336
64251 chr1 110882444 110882444 1 + A G rs814771 110882441 + 110882421 110882461 41 AAAAATTCTTCGGGCGGGGGCGAATCGCGCAGCAGCTCCCG AAAAATTCTTCGGGCGGGGGCGAGTCGCGCAGCAGCTCCCG < 41bp 0.454154940372346 0.702544561600037 0.8581308 0.8613955 prediction 0.405089123200075 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110882441 chr1:110882444 synonymous SNV . 0 24 hm5C_associated_SNPs_128539 0 0 4 EIF3H POSTAR2 ENCODE chr1:110882421-110882477
64251 chr8 143623479 143623479 1 + C T SKCM 143623478 + 143623458 143623498 41 TGCACGGCTCACCCCGCTATCCCGGCGGGCCCCTGCCCGAC TGCACGGCTCACCCCGCTATCTCGGCGGGCCCCTGCCCGAC < 41bp 0.642750521468656 0.845293291687401 0.8788823 0.3315907 prediction 0.405085540437491 Functional Gain - ADGRB1 ENSG00000181790 CDS Human protein_coding chr8:143623478 chr8:143623479 nonsynonymous SNV 0.021 0 22 hm5C_associated_SNPs_128540 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:143623475-143623507
64251 chr22 46067840 46067840 1 + C A rs114149373 46067839 + 46067819 46067859 41 GCTGTGTAGGGCGAGGCCTCCCCCTTCCTCCTCGCCATCCT GCTGTGTAGGGCGAGGCCTCCACCTTCCTCCTCGCCATCCT < 41bp 0.50813960849997 0.710680687557938 0.08394247 0.14220273 prediction 0.405082158115936 Functional Gain - ATXN10 ENSG00000130638 UTR5 Human protein_coding chr22:46067839 chr22:46067840 . . 0 22 hm5C_associated_SNPs_128541 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819216 chr22:46067720-46067900
64251 chr17 61908926 61908926 1 + C A SKCM 61908925 + 61908905 61908945 41 AACCTGACCCGGGGGATCAACCTGAGAAAAATTGCTGAGCT AACCTGACCCGGGGGATCAACATGAGAAAAATTGCTGAGCT < 41bp 0.644726288852451 0.84726629742331 0.9168869 0.91511697 prediction 0.405080017141718 Functional Gain - PSMC5 ENSG00000087191 CDS Human protein_coding chr17:61908925 chr17:61908926 nonsynonymous SNV 0.996 2 22 hm5C_associated_SNPs_128543 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:61908872-61908966
64251 chr2 103380833 103380833 1 + C T SKCM 103380832 + 103380812 103380852 41 GCACACATGCTTACCTGTCTCCGTACCCCTTCATGAGAGGC GCACACATGCTTACCTGTCTCTGTACCCCTTCATGAGAGGC < 41bp 0.435192415986479 0.702533176400708 0.2888279 0.090637505 prediction 0.405066352801416 Functional Gain - TMEM182 ENSG00000170417 CDS Human protein_coding chr2:103380832 chr2:103380833 nonsynonymous SNV 0.944 4 22 hm5C_associated_SNPs_128544 0 0 2 YBX3 POSTAR2 ENCODE chr2:103380821-103380882
64251 chr17 80443439 80443439 1 + C A STAD 80443435 + 80443415 80443455 41 GGTGGTGTTACGCTTTGCTGCAGCCTATGGCTTTCGAAACA GGTGGTGTTACGCTTTGCTGCAGCATATGGCTTTCGAAACA < 41bp 0.297718362047749 0.702532215841334 0.13809645 0.14378083 prediction 0.405064431682669 Functional Gain - NARF ENSG00000141562 CDS Human protein_coding chr17:80443435 chr17:80443439 synonymous SNV . 0 25 hm5C_associated_SNPs_128545 0 0 9 TARDBP POSTAR2 DRA001158,DRS012386 chr17:80443416-80443445
64251 chr11 85342820 85342820 1 + A G LUSC 85342817 + 85342797 85342837 41 AGACCAATGGTCATAGAAATCATAGAAAAAAATTTTGACTA AGACCAATGGTCATAGAAATCATGGAAAAAAATTTTGACTA < 41bp 0.488471107635719 0.702530007047693 0.22560564 0.3868621 prediction 0.405060014095386 Functional Gain - TMEM126B ENSG00000171204 CDS Human protein_coding chr11:85342817 chr11:85342820 nonsynonymous SNV 0.990 0 24 hm5C_associated_SNPs_128546 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:85342810-85342836
64251 chr10 85909908 85909908 1 + C T SKCM 85909907 + 85909887 85909927 41 TGGCATTGTGGGAGGCCTCTCCACTGTGGCCATGTGTGCGC TGGCATTGTGGGAGGCCTCTCTACTGTGGCCATGTGTGCGC < 41bp 0.647238581053612 0.849766571948372 0.077058315 0.06899688 prediction 0.405055981789519 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85909907 chr10:85909908 synonymous SNV . 0 22 hm5C_associated_SNPs_128548 0 0 15 ATXN2 POSTAR2 DRA001158,DRS012390 chr10:85909811-85909933
64251 chr3 112969628 112969628 1 + C T SKCM 112969627 + 112969607 112969647 41 GGGACGGTACCAGTGTGTGGCCCGGATGCCTGCGGGGGCTG GGGACGGTACCAGTGTGTGGCTCGGATGCCTGCGGGGGCTG < 41bp 0.468787043552535 0.702527820663629 0.3605426 0.41142315 prediction 0.405055641327257 Functional Gain - BOC ENSG00000144857 CDS Human protein_coding chr3:112969627 chr3:112969628 synonymous SNV . 0 22 hm5C_associated_SNPs_128549 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:112969617-112969677
64251 chr1 156737746 156737746 1 + C G rs551053247 156737742 + 156737722 156737762 41 GCCCCCTCAGATGCTGGCGCCAGCCTTTCCCCCGCCGCTGT GCCCCCTCAGATGCTGGCGCCAGCGTTTCCCCCGCCGCTGT < 41bp 0.666430711122321 0.868957935370613 0.5230286 0.89257735 prediction 0.405054448496585 Functional Gain - PRCC ENSG00000143294 CDS Human protein_coding chr1:156737742 chr1:156737746 synonymous SNV . 0 25 hm5C_associated_SNPs_128550 0 0 4 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:156737734-156737761
64251 chr7 106508577 106508577 1 + C A LUSC 106508573 + 106508553 106508593 41 CCGCGCATGGCGGAGGTGGCCAGCCGCGACCCCAAGCTCTA CCGCGCATGGCGGAGGTGGCCAGCAGCGACCCCAAGCTCTA < 41bp 0.739124416261478 0.941650527470439 0.8839608 0.89687675 prediction 0.405052222417922 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508573 chr7:106508577 nonsynonymous SNV 0.096 2 25 hm5C_associated_SNPs_128551 0 0 5 FMR1 POSTAR2 ENCODE chr7:106508546-106508607
64251 chr13 100925515 100925515 1 + T C LUSC 100925512 + 100925492 100925532 41 AGCTGTAGCTCTTGCCAGAGCAGTAAAATATTCCTCTGCTG AGCTGTAGCTCTTGCCAGAGCAGCAAAATATTCCTCTGCTG < 41bp 0.540055276241803 0.742573540696088 0.25214708 0.19426492 prediction 0.405036528908571 Functional Gain - PCCA ENSG00000175198 CDS Human protein_coding chr13:100925512 chr13:100925515 nonsynonymous SNV 0.916 2 24 hm5C_associated_SNPs_128557 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr13:100925490-100925528
64251 chr1 153614902 153614902 1 + C T UCEC 153614901 + 153614881 153614921 41 CTTAGGGGCGGGATGTCACTCCGAGGTCAGTGCTGTGTACC CTTAGGGGCGGGATGTCACTCTGAGGTCAGTGCTGTGTACC < 41bp 0.614926752386568 0.817444799281576 0.93237805 0.8376235 prediction 0.405036093790015 Functional Gain - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153614901 chr1:153614902 stopgain 1.000 1 22 hm5C_associated_SNPs_128558 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:153614873-153614908
64251 chr4 146576316 146576316 1 + C T SKCM 146576315 + 146576295 146576335 41 ATAGGTAATTCGTATTTCTGCCCGAAGTGGAGAGGGGATCT ATAGGTAATTCGTATTTCTGCTCGAAGTGGAGAGGGGATCT < 41bp 0.620990401772781 0.823502757430906 0.16576725 0.3350382 prediction 0.405024711316251 Functional Gain - MMAA ENSG00000151611 CDS Human protein_coding chr4:146576315 chr4:146576316 synonymous SNV . 0 22 hm5C_associated_SNPs_128563 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr4:146576314-146576338
64251 chr2 241536326 241536326 1 + C T rs139964868 241536325 + 241536305 241536345 41 GCACTGCCGGCCCAGTGACACCGAGTTCCACCCCATCGGCT GCACTGCCGGCCCAGTGACACTGAGTTCCACCCCATCGGCT < 41bp 0.474512829953831 0.702511934066331 0.08961636 0.10899222 prediction 0.405023868132661 Functional Gain - CAPN10 ENSG00000142330 CDS Human protein_coding chr2:241536325 chr2:241536326 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_128564 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:241536305-241536327
64251 chr11 9534102 9534102 1 + A G LIHC 9534099 + 9534079 9534119 41 CCACAGTAACCCAATCTGGACTGAGTCAACAAGTTACACTC CCACAGTAACCCAATCTGGACTGGGTCAACAAGTTACACTC < 41bp 0.60662588798429 0.809127400683885 0.090886235 0.21642405 prediction 0.405003025399189 Functional Gain - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9534099 chr11:9534102 nonsynonymous SNV 0.987 1 24 hm5C_associated_SNPs_128570 0 0 2 GRWD1 POSTAR2 ENCODE chr11:9534015-9534121
64251 chr15 41101323 41101323 1 + T A LAML 41101319 + 41101299 41101339 41 GCTTCATGTTTCTTGTAGTACGGCTGTAAGAATTGTGGCAG GCTTCATGTTTCTTGTAGTACGGCAGTAAGAATTGTGGCAG < 41bp 0.700060092263473 0.902549869606255 0.16491124 0.24868396 prediction 0.404979554685563 Functional Gain - ZFYVE19 ENSG00000166140 CDS Human protein_coding chr15:41101319 chr15:41101323 nonsynonymous SNV 0.999 5 25 hm5C_associated_SNPs_128575 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:41101317-41101344
64251 chr5 159437637 159437637 1 + T C COAD 159437635 + 159437615 159437655 41 AGTGTGCTGGCCCTCCAGTTCCTGATCCCAAAAATCAGCAT AGTGTGCTGGCCCTCCAGTTCCCGATCCCAAAAATCAGCAT < 41bp 0.663348093445289 0.86582932495855 0.23013565 0.26887944 prediction 0.404962463026521 Functional Gain - TTC1 ENSG00000113312 CDS Human protein_coding chr5:159437635 chr5:159437637 synonymous SNV . 0 23 hm5C_associated_SNPs_128580 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:159437615-159437639
64251 chr19 1058887 1058887 1 + T G OV 1058883 + 1058863 1058903 41 ATGTAGCCCGTGAACGGGAGCGGGTGGTCCAAGGAGCCACC ATGTAGCCCGTGAACGGGAGCGGGGGGTCCAAGGAGCCACC < 41bp 0.500021414140414 0.702498174914479 0.89159036 0.91597915 prediction 0.404953521548131 Functional Gain - ABCA7 ENSG00000064687 CDS Human protein_coding chr19:1058883 chr19:1058887 nonsynonymous SNV 0.431 4 25 hm5C_associated_SNPs_128585 0 0 8 BUD13 POSTAR2 ENCODE chr19:1058881-1058910
64251 chr11 34938265 34938265 1 + C T rs2956109 34938264 + 34938244 34938284 41 GCGTTATCTTGTGGGCTTCCCCGGCCGCCGAAGCGTAGGGC GCGTTATCTTGTGGGCTTCCCTGGCCGCCGAAGCGTAGGGC < 41bp 0.509308779454645 0.711766802627401 0.51697046 0.43847 prediction 0.404916046345512 Functional Gain - PDHX ENSG00000110435 CDS Human protein_coding chr11:34938264 chr11:34938265 synonymous SNV . 0 22 hm5C_associated_SNPs_128591 2 0 2 DDX24 POSTAR2 ENCODE chr11:34938221-34938292
64251 chr5 145843190 145843190 1 + T G LUAD 145843186 + 145843166 145843206 41 TACAGTTAGTGTTTCAACTCCTGCTCCTACAGCCACACCTG TACAGTTAGTGTTTCAACTCCTGCGCCTACAGCCACACCTG < 41bp 0.487530887198154 0.702457540258417 0.041722506 0.07294127 prediction 0.404915080516834 Functional Gain - TCERG1 ENSG00000113649 CDS Human protein_coding chr5:145843186 chr5:145843190 synonymous SNV . 0 25 hm5C_associated_SNPs_128592 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003587 chr5:145843170-145843191
64251 chr11 65107869 65107869 1 + T C UCEC 65107866 + 65107846 65107886 41 TTCCCTGCAGCCTTGGGGAGCAGTACTACAAAGATGCCATG TTCCCTGCAGCCTTGGGGAGCAGCACTACAAAGATGCCATG < 41bp 0.490942479634167 0.702446199280221 0.2837886 0.3482811 prediction 0.404892398560442 Functional Gain - DPF2 ENSG00000133884 CDS Human protein_coding chr11:65107866 chr11:65107869 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_128597 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:65107860-65107880
64251 chr11 67352180 67352180 1 + C T STAD 67352179 + 67352159 67352199 41 TACGGGCAGCTCCCCAAGTTCCAGGACGGAGACCTCACCCT TACGGGCAGCTCCCCAAGTTCTAGGACGGAGACCTCACCCT < 41bp 0.630484775167506 0.832927208018715 0.24971998 0.27125466 prediction 0.404884865702419 Functional Gain - GSTP1 ENSG00000084207 CDS Human protein_coding chr11:67352179 chr11:67352180 stopgain 0.997 0 22 hm5C_associated_SNPs_128598 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67352157-67352243
64251 chr20 47851537 47851537 1 + C T COAD 47851536 + 47851516 47851556 41 CAAACCAAGAAGCAGGCCCACCGCATGCACATCCTCCTGGG CAAACCAAGAAGCAGGCCCACTGCATGCACATCCTCCTGGG < 41bp 0.65646822742538 0.858881888751188 0.122552305 0.5214593 prediction 0.404827322651615 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47851536 chr20:47851537 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_128606 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:47851527-47851554
64251 chrX 54841194 54841194 1 + A G READ 54841191 + 54841171 54841211 41 AGACCAGCAAGATGAAAGTCCTCAAGTTTGCCTGCAAGGTA AGACCAGCAAGATGAAAGTCCTCGAGTTTGCCTGCAAGGTA < 41bp 0.620388740954026 0.822800715575913 0.17961636 0.2052004 prediction 0.404823949243774 Functional Gain - MAGED2 ENSG00000102316 CDS Human protein_coding chrX:54841191 chrX:54841194 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_128607 0 0 5 CPSF7 POSTAR2 GSE37401,GSM917663 chrX:54841163-54841199
64251 chr16 86547001 86547001 1 + C T rs56404456 86547000 + 86546980 86547020 41 GGTGCTGTGCAGGGGAAAGCCCCCGCACCCACACAGGAATT GGTGCTGTGCAGGGGAAAGCCTCCGCACCCACACAGGAATT < 41bp 0.486085862934566 0.702411844007215 0.1492193 0.10533813 prediction 0.40482368801443 Functional Gain - FOXF1 ENSG00000103241 UTR3 Human protein_coding chr16:86547000 chr16:86547001 . . 0 22 hm5C_associated_SNPs_128608 1 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr16:86547001-86547002
64251 chr13 20240602 20240602 1 + T C OV 20240600 + 20240580 20240620 41 AATTCAGACATCGTACGACTCGTAATTGAATGTGGAGCTGA AATTCAGACATCGTACGACTCGCAATTGAATGTGGAGCTGA < 41bp 0.403533231754868 0.70240582779006 0.12206569 0.114275664 prediction 0.404811655580121 Functional Gain - MPHOSPH8 ENSG00000196199 CDS Human protein_coding chr13:20240600 chr13:20240602 nonsynonymous SNV 0.334 2 23 hm5C_associated_SNPs_128611 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr13:20240570-20240607
64251 chr14 94674896 94674896 1 + A G COAD 94674893 + 94674873 94674913 41 GACGCTTCGGAGAGTGTTGCCAAAAGTCAGAGTAAGTTGGT GACGCTTCGGAGAGTGTTGCCAAGAGTCAGAGTAAGTTGGT < 41bp 0.589996869782052 0.792393569930539 0.81604826 0.12522641 prediction 0.404793400296974 Functional Gain - PPP4R4 ENSG00000119698 CDS Human protein_coding chr14:94674893 chr14:94674896 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_128617 0 0 2 GRWD1 POSTAR2 ENCODE chr14:94674838-94674903
64251 chr18 56367809 56367809 1 + C T SKCM 56367808 + 56367788 56367828 41 AGCTGGATGTTTGCGACATCCCAGAGAGCTTCCAGAGTAAG AGCTGGATGTTTGCGACATCCTAGAGAGCTTCCAGAGTAAG < 41bp 0.645984052621184 0.848359597050066 0.16186595 0.1931045 prediction 0.404751088857764 Functional Gain - MALT1 ENSG00000172175 CDS Human protein_coding chr18:56367808 chr18:56367809 nonsynonymous SNV 0.977 0 22 hm5C_associated_SNPs_128622 0 0 1 PRPF8 POSTAR2 ENCODE chr18:56367808-56367866
64251 chr3 33883532 33883532 1 + A G UCEC 33883529 + 33883509 33883549 41 TCAGTTGATTAAAGAACTGCCTGAATTACTGCAACGAAATA TCAGTTGATTAAAGAACTGCCTGGATTACTGCAACGAAATA < 41bp 0.48403781575058 0.702371678590325 0.027589977 0.07128447 prediction 0.40474335718065 Functional Gain - PDCD6IP ENSG00000170248 CDS Human protein_coding chr3:33883529 chr3:33883532 nonsynonymous SNV 0.991 2 24 hm5C_associated_SNPs_128623 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:33883498-33883539
64251 chr11 34149118 34149118 1 + C A UCEC 34149114 + 34149094 34149134 41 GTGAAGAGCCTACTTGGCCCCTACCTTGTTTTCATGGCATC GTGAAGAGCCTACTTGGCCCCTACATTGTTTTCATGGCATC < 41bp 0.271827680436021 0.702361504005445 0.008900106 0.625527 prediction 0.40472300801089 Functional Gain - NAT10 ENSG00000135372 CDS Human protein_coding chr11:34149114 chr11:34149118 nonsynonymous SNV 0.984 1 25 hm5C_associated_SNPs_128627 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:34149112-34149139
64251 chr17 40695147 40695147 1 + C T BLCA 40695146 + 40695126 40695166 41 GCTGTGCTGGGAGCTGTGCCCCGTGGCCGCCTCCTGGTTCT GCTGTGCTGGGAGCTGTGCCCTGTGGCCGCCTCCTGGTTCT < 41bp 0.577412163477097 0.77977275256941 0.278683 0.2918858 prediction 0.404721178184625 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40695146 chr17:40695147 nonsynonymous SNV 0.121 2 22 hm5C_associated_SNPs_128628 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:40695146-40695164
64251 chr11 58892887 58892887 1 + A G UCEC 58892884 + 58892864 58892904 41 AACATATATAAAAAGGACTTCGGAAAAATGACTGCAAATTC AACATATATAAAAAGGACTTCGGGAAAATGACTGCAAATTC < 41bp 0.574325119719826 0.776680292605467 0.298703 0.30405593 prediction 0.404710345771282 Functional Gain - FAM111B ENSG00000189057 CDS Human protein_coding chr11:58892884 chr11:58892887 synonymous SNV . 0 24 hm5C_associated_SNPs_128633 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr11:58892841-58892889
64251 chrX 48652558 48652558 1 + C T CESC 48652557 + 48652537 48652577 41 CCAGCACTACTGTGGTGGCTCCGCTCAGCTCATGAGGGCAC CCAGCACTACTGTGGTGGCTCTGCTCAGCTCATGAGGGCAC < 41bp 0.465557096604627 0.702349940585185 0.05856198 0.061436057 prediction 0.40469988117037 Functional Gain - GATA1 ENSG00000102145 CDS Human protein_coding chrX:48652557 chrX:48652558 nonsynonymous SNV 0.366 3 22 hm5C_associated_SNPs_128634 0 0 1 DDX55 POSTAR2 ENCODE chrX:48652556-48652569
64251 chr10 98743002 98743002 1 + C T SKCM 98743001 + 98742981 98743021 41 GAGTTACGAGGAGAGATTTTCCCCAGCAGGGACCCCATAAC GAGTTACGAGGAGAGATTTTCTCCAGCAGGGACCCCATAAC < 41bp 0.64128262146093 0.843631174454247 0.15469423 0.9365708 prediction 0.404697105986634 Functional Gain - LCOR ENSG00000155640 CDS Human other chr10:98743001 chr10:98743002 nonsynonymous SNV 0.002 0 22 hm5C_associated_SNPs_128635 0 0 2 GRWD1 POSTAR2 ENCODE chr10:98742986-98743036
64251 chr19 34957830 34957830 1 + C G rs45482396 34957829 + 34957809 34957849 41 TTGAAGTTGTTGGTGATGCCCCGGAAAAAGTGGGGCCCAAA TTGAAGTTGTTGGTGATGCCCGGGAAAAAGTGGGGCCCAAA < 41bp 0.694468837432224 0.89681362857877 0.42628783 0.8430534 prediction 0.404689582293092 Functional Gain - UBA2 ENSG00000126261 CDS Human protein_coding chr19:34957829 chr19:34957830 nonsynonymous SNV 0.479 1 22 hm5C_associated_SNPs_128640 0 0 17 CPSF6 POSTAR2 GSE37401,GSM917664 chr19:34957766-34957834
64251 chr10 103919017 103919017 1 + T C STAD 103919014 + 103918994 103919034 41 AGCAGTAGCAGCAGCAGCAGCAGTAGCAGTGATGACTCAGA AGCAGTAGCAGCAGCAGCAGCAGCAGCAGTGATGACTCAGA < 41bp 0.592025676743202 0.794356400389201 0.37203395 0.36493832 prediction 0.404661447291997 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103919014 chr10:103919017 synonymous SNV . 0 24 hm5C_associated_SNPs_128644 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr10:103919008-103919033
64251 chr19 55857887 55857887 1 + C T UCEC 55857886 + 55857866 55857906 41 AGGAAAGGTGAAGGAGCTTTCCGAACCAGGCCTAGGGAGCC AGGAAAGGTGAAGGAGCTTTCTGAACCAGGCCTAGGGAGCC < 41bp 0.620199999594684 0.822521904782227 0.62288636 0.30774993 prediction 0.404643810375085 Functional Gain - KMT5C ENSG00000133247 CDS Human protein_coding chr19:55857886 chr19:55857887 stopgain 0.362 0 22 hm5C_associated_SNPs_128648 0 0 3 BUD13 POSTAR2 ENCODE chr19:55857867-55857972
64251 chr1 45809220 45809220 1 + C A rs149059377 45809219 + 45809199 45809239 41 ATGTGGAAGTGAGCCAGGGACCGCAGCCCTGCAGCTCTGGA ATGTGGAAGTGAGCCAGGGACAGCAGCCCTGCAGCTCTGGA < 41bp 0.63946822636751 0.841776283559254 0.25111872 0.15785423 prediction 0.404616114383488 Functional Gain - TOE1 ENSG00000132773 CDS Human protein_coding chr1:45809219 chr1:45809220 nonsynonymous SNV 0.350 0 22 hm5C_associated_SNPs_128653 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr1:45809204-45809229
64251 chr20 62632543 62632543 1 + C T rs149287029 62632542 + 62632522 62632562 41 TGTCAGGATTTACATCAGAGCCGCAGAGCTGGAAACGGACA TGTCAGGATTTACATCAGAGCTGCAGAGCTGGAAACGGACA < 41bp 0.438768724506631 0.702291815468398 0.121661514 0.12085056 prediction 0.404583630936796 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62632542 chr20:62632543 synonymous SNV . 0 22 hm5C_associated_SNPs_128658 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:62632512-62632565
64251 chr20 34129842 34129842 1 + T A rs200394220 34129838 + 34129818 34129858 41 GGCTGGCGTCCCCTTTCCGGCCGGTCCCCATGGAGGCGCTG GGCTGGCGTCCCCTTTCCGGCCGGACCCCATGGAGGCGCTG < 41bp 0.483656881233247 0.702291001070484 0.056591272 0.06236559 prediction 0.404582002140968 Functional Gain - ERGIC3 ENSG00000125991 UTR5 Human protein_coding chr20:34129838 chr20:34129842 . . 0 25 hm5C_associated_SNPs_128659 0 0 23 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:34129826-34129849
64251 chr4 141458621 141458621 1 + T C UCEC 141458618 + 141458598 141458638 41 AGATAACTGGTTATAAACAGCTGTATTTGGATGTAGAAAGT AGATAACTGGTTATAAACAGCTGCATTTGGATGTAGAAAGT < 41bp 0.476822956016683 0.702289646198829 0.30948657 0.2658868 prediction 0.404579292397659 Functional Gain - ELMOD2 ENSG00000179387 CDS Human protein_coding chr4:141458618 chr4:141458621 nonsynonymous SNV 0.994 3 24 hm5C_associated_SNPs_128661 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr4:141458584-141458670
64251 chr21 34635478 34635478 1 + C T rs145095223 34635477 + 34635457 34635497 41 TCCACTCCAGGACCCTTTTCCCGAAGAGGACTACAGCTCCA TCCACTCCAGGACCCTTTTCCTGAAGAGGACTACAGCTCCA < 41bp 0.609314352895356 0.811597828230324 0.5287673 0.36030704 prediction 0.404566950669935 Functional Gain - IFNAR2 ENSG00000159110 CDS Human protein_coding chr21:34635477 chr21:34635478 synonymous SNV . 0 22 hm5C_associated_SNPs_128664 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:34635456-34635479
64251 chr10 101610401 101610401 1 + T C UCEC 101610399 + 101610379 101610419 41 TGTGCCTGGGCAGGGCTCTGCTTCGGAAATCCAAGATCCTG TGTGCCTGGGCAGGGCTCTGCTCCGGAAATCCAAGATCCTG < 41bp 0.413867620557226 0.702282170240634 0.13263324 0.27614242 prediction 0.404564340481268 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101610399 chr10:101610401 synonymous SNV . 0 23 hm5C_associated_SNPs_128666 0 0 1 LSM11 POSTAR2 ENCODE chr10:101610374-101610410
64251 chr11 119003427 119003427 1 + C T GBM 119003426 + 119003406 119003446 41 TGCCCGCTGCCTTCCTCCCTCCGCAACCACATGCGCTTTCG TGCCCGCTGCCTTCCTCCCTCTGCAACCACATGCGCTTTCG < 41bp 0.656459034812323 0.858739825043817 0.091798574 0.44823673 prediction 0.404561580462988 Functional Gain - HINFP ENSG00000172273 CDS Human protein_coding chr11:119003426 chr11:119003427 nonsynonymous SNV 0.996 4 22 hm5C_associated_SNPs_128668 0 0 1 DDX24 POSTAR2 ENCODE chr11:119003425-119003487
64251 chr22 21800268 21800268 1 + C T UCEC 21800267 + 21800247 21800287 41 GCAGGGCCCAAGGGTCCCTGCCCGGGAGAGGAGGGTGAGGG GCAGGGCCCAAGGGTCCCTGCTCGGGAGAGGAGGGTGAGGG < 41bp 0.6206223112593 0.822894362300183 0.3137347 0.19073927 prediction 0.404544102081766 Functional Gain - HIC2 ENSG00000169635 CDS Human protein_coding chr22:21800267 chr22:21800268 nonsynonymous SNV 0.465 0 22 hm5C_associated_SNPs_128671 0 0 5 FXR2 POSTAR2 ENCODE chr22:21800243-21800328
64251 chr19 49378882 49378882 1 + C T UCEC 49378881 + 49378861 49378901 41 CTGCCCGCAGGTGCGCTTCTCCGAGAAGGTCACTGTCCATT CTGCCCGCAGGTGCGCTTCTCTGAGAAGGTCACTGTCCATT < 41bp 0.588099393953375 0.790365006483228 0.88531995 0.7896426 prediction 0.404531225059706 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49378881 chr19:49378882 synonymous SNV . 0 22 hm5C_associated_SNPs_128672 0 0 2 FXR2 POSTAR2 GSE39682,GSM977620 chr19:49378880-49378900
64251 chr11 89892482 89892482 1 + C A COAD 89892478 + 89892458 89892498 41 TGTGAGTTATAGTATCGGACCTGGCTTTACAGGGAGTGATT TGTGAGTTATAGTATCGGACCTGGATTTACAGGGAGTGATT < 41bp 0.294679868240962 0.702263409529553 0.18089607 0.23089886 prediction 0.404526819059107 Functional Gain - NAALAD2 ENSG00000077616 CDS Human protein_coding chr11:89892478 chr11:89892482 synonymous SNV . 0 25 hm5C_associated_SNPs_128673 0 0 1 PRPF8 POSTAR2 ENCODE chr11:89892477-89892538
64251 chr10 19856477 19856477 1 + T G ESCA 19856474 + 19856454 19856494 41 GCTAAACATCCTGGTGTGGTCAGTGATTGGAAATAAAAGAA GCTAAACATCCTGGTGTGGTCAGGGATTGGAAATAAAAGAA < 41bp 0.31521551156888 0.702262610485565 0.17311028 0.8650396 prediction 0.40452522097113 Functional Gain - MALRD1 ENSG00000204740 CDS Human protein_coding chr10:19856474 chr10:19856477 nonsynonymous SNV 0.467 0 24 hm5C_associated_SNPs_128674 0 0 1 EIF3D POSTAR2 ENCODE chr10:19856440-19856500
64251 chr17 6941536 6941536 1 + C G UCS 6941533 + 6941513 6941553 41 TGTCCTGTTATTTCTCTCGCCGACGATCCCTGGCCACCGGG TGTCCTGTTATTTCTCTCGCCGAGGATCCCTGGCCACCGGG < 41bp 0.515357796624098 0.717619396502441 0.31447312 0.91114414 prediction 0.404523199756686 Functional Gain - SLC16A13 ENSG00000174327 CDS Human protein_coding chr17:6941533 chr17:6941536 nonsynonymous SNV 0.402 4 24 hm5C_associated_SNPs_128675 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234283 chr17:6941520-6941540
64251 chr14 93118186 93118186 1 + C A GBM 93118182 + 93118162 93118202 41 TTGCCCTGCACGCCCTTTGCCGCCCACCTCTGATGCCACCT TTGCCCTGCACGCCCTTTGCCGCCAACCTCTGATGCCACCT < 41bp 0.275162325573397 0.702260315938612 0.027660698 0.49468902 prediction 0.404520631877224 Functional Gain - RIN3 ENSG00000100599 CDS Human protein_coding chr14:93118182 chr14:93118186 synonymous SNV . 0 25 hm5C_associated_SNPs_128677 0 0 1 PCBP2 POSTAR2 ENCODE chr14:93118175-93118239
64251 chr18 12030481 12030481 1 + C T rs535394516 12030480 + 12030460 12030500 41 GCGGCTGAGGCAAAGCTGCTCCCAAGGCCTCCCTGGGCTGC GCGGCTGAGGCAAAGCTGCTCTCAAGGCCTCCCTGGGCTGC < 41bp 0.564027254679859 0.766285231067437 0.1714774 0.11060658 prediction 0.404515952775157 Functional Gain - IMPA2 ENSG00000141401 UTR3 Human protein_coding chr18:12030480 chr18:12030481 . . 0 22 hm5C_associated_SNPs_128678 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr18:12030480-12030481
64251 chr12 53800472 53800472 1 + C T ESCA 53800471 + 53800451 53800491 41 AAACAGCCCAGATGCCCAACCCCAAGCCGGTCGGAGGACCC AAACAGCCCAGATGCCCAACCTCAAGCCGGTCGGAGGACCC < 41bp 0.410325647541371 0.702256163154608 0.2745837 0.23895729 prediction 0.404512326309217 Functional Gain - SP1 ENSG00000185591 CDS Human protein_coding chr12:53800471 chr12:53800472 synonymous SNV . 0 22 hm5C_associated_SNPs_128679 0 0 6 CAPRIN1 POSTAR2 GSE38201,GSM936509 chr12:53800461-53800479
64251 chr17 4848086 4848086 1 + T A UCEC 4848084 + 4848064 4848104 41 CCATTTGCAAGCAGCCTGTTCATCGGGGTCCTGGGGACGAA CCATTTGCAAGCAGCCTGTTCAACGGGGTCCTGGGGACGAA < 41bp 0.521935361287845 0.72418636470375 0.35866266 0.71746886 prediction 0.40450200683181 Functional Gain - RNF167 ENSG00000108523 CDS Human protein_coding chr17:4848084 chr17:4848086 nonsynonymous SNV 0.999 0 23 hm5C_associated_SNPs_128683 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:4848060-4848100
64251 chr10 85902441 85902441 1 + C T UCEC 85902440 + 85902420 85902460 41 ACCAAAACAAGAATTGGGATCCGGCGTGGGAGAACTGGCCA ACCAAAACAAGAATTGGGATCTGGCGTGGGAGAACTGGCCA < 41bp 0.604268454628296 0.806518883672344 0.39413023 0.18671086 prediction 0.404500858088096 Functional Gain - GHITM ENSG00000165678 CDS Human protein_coding chr10:85902440 chr10:85902441 nonsynonymous SNV 0.815 2 22 hm5C_associated_SNPs_128685 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012389 chr10:85902414-85902467
64251 chr3 52833885 52833885 1 + C G rs74587399 52833884 + 52833864 52833904 41 GCACTTAGTCCAGGCCACGCCCGAGAACCTCCAGGAGGCCA GCACTTAGTCCAGGCCACGCCGGAGAACCTCCAGGAGGCCA < 41bp 0.373439942671662 0.702249495128967 0.11342645 0.7997638 prediction 0.404498990257934 Functional Gain - ITIH3 ENSG00000162267 CDS Human protein_coding chr3:52833884 chr3:52833885 synonymous SNV . 0 22 hm5C_associated_SNPs_128687 0 0 5 BUD13 POSTAR2 ENCODE chr3:52833827-52833908
64251 chr3 56627598 56627598 1 + A G rs1491170 56627595 + 56627575 56627615 41 TTCTCAATCTCAGCTGTTCTCTCAGTCAACACACAAACAAC TTCTCAATCTCAGCTGTTCTCTCGGTCAACACACAAACAAC < 41bp 0.606844580544675 0.809092422477619 0.13258326 0.3098617 prediction 0.404495683865888 Functional Gain - CCDC66 ENSG00000180376 CDS Human protein_coding chr3:56627595 chr3:56627598 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_128688 0 0 6 UPF1 POSTAR2 GSE69586,GSM1704216 chr3:56627587-56627608
64251 chr12 32135274 32135274 1 + C T OV 32135273 + 32135253 32135293 41 CCCAGATAACTCCAGTAATGCCAGAGAATGCAGAGAGACAA CCCAGATAACTCCAGTAATGCTAGAGAATGCAGAGAGACAA < 41bp 0.559805893588569 0.762046523782635 0.37063935 0.035567492 prediction 0.404481260388132 Functional Gain - KIAA1551 ENSG00000174718 CDS Human protein_coding chr12:32135273 chr12:32135274 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_128691 0 0 1 SAFB2 POSTAR2 ENCODE chr12:32135191-32135288
64251 chr1 167759133 167759133 1 + T C rs74388383 167759130 + 167759110 167759150 41 TTGGGCATCTATTTTGAAAACTATAGGAGCCTTTGGAAGGC TTGGGCATCTATTTTGAAAACTACAGGAGCCTTTGGAAGGC < 41bp 0.513944365196433 0.716168404723402 0.20057371 0.4457997 prediction 0.404448079053939 Functional Gain - MPZL1 ENSG00000197965 UTR3 Human protein_coding chr1:167759130 chr1:167759133 . . 0 24 hm5C_associated_SNPs_128695 0 0 2 HNRNPC POSTAR2 E-MTAB-1371,ERR196176-ERR196177-ERR196178-ERR196181-ERR196182-ERR196185-ERR196186-ERR196188-ERR196189 chr1:167759120-167759140
64251 chrX 129147330 129147330 1 + T C STAD 129147327 + 129147307 129147347 41 GGGACCCTGCCCCTGGTTACCACTAACTTCAGTCCTCTGCC GGGACCCTGCCCCTGGTTACCACCAACTTCAGTCCTCTGCC < 41bp 0.540733037056329 0.742954977741361 0.17949075 0.12414843 prediction 0.404443881370063 Functional Gain - BCORL1 ENSG00000085185 CDS Human protein_coding chrX:129147327 chrX:129147330 synonymous SNV . 0 24 hm5C_associated_SNPs_128698 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:129147320-129147340
64251 chr6 116559428 116559428 1 + C A UCEC 116559424 + 116559404 116559444 41 AGTAATTGGGAGACAGTCCTCATCCTGGAAGAACTCAGAGG AGTAATTGGGAGACAGTCCTCATCATGGAAGAACTCAGAGG < 41bp 0.283077102421384 0.702218109157354 0.17601573 0.19068503 prediction 0.404436218314709 Functional Gain - NT5DC1 ENSG00000178425 CDS Human protein_coding chr6:116559424 chr6:116559428 nonsynonymous SNV 0.799 3 25 hm5C_associated_SNPs_128700 0 0 3 DDX6 POSTAR2 ENCODE chr6:116559408-116559468
64251 chr13 113536797 113536797 1 + C T rs372998212 113536796 + 113536776 113536816 41 TTACTCAACAACCCTCCAATCCGGATGCTGTGGGAAGGGCC TTACTCAACAACCCTCCAATCTGGATGCTGTGGGAAGGGCC < 41bp 0.537612305087054 0.739826778256189 0.92270637 0.7144966 prediction 0.404428946338271 Functional Gain - ATP11A ENSG00000068650 UTR3 Human protein_coding chr13:113536796 chr13:113536797 . . 0 22 hm5C_associated_SNPs_128701 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr13:113536758-113536826
64251 chr1 84945089 84945089 1 + C T SKCM 84945088 + 84945068 84945108 41 CGACGGAAAACGGGGTCCAACCCCCGAAAGCGGCTGCCTTT CGACGGAAAACGGGGTCCAACTCCCGAAAGCGGCTGCCTTT < 41bp 0.596301307395333 0.798506356174048 0.2177451 0.24616697 prediction 0.404410097557429 Functional Gain - RPF1 ENSG00000117133 CDS Human protein_coding chr1:84945088 chr1:84945089 nonsynonymous SNV 0.249 0 22 hm5C_associated_SNPs_128706 0 0 2 GRWD1 POSTAR2 ENCODE chr1:84945025-84945095
64251 chr17 80684737 80684737 1 + T A STAD 80684735 + 80684715 80684755 41 ATCCCTGACCTGTTCCGTGACCTGGAGATCATCCCAGCCTT ATCCCTGACCTGTTCCGTGACCAGGAGATCATCCCAGCCTT < 41bp 0.486963713073246 0.702200930786005 0.4096368 0.9050604 prediction 0.40440186157201 Functional Gain - FN3KRP ENSG00000141560 CDS Human protein_coding chr17:80684735 chr17:80684737 nonsynonymous SNV 0.008 2 23 hm5C_associated_SNPs_128709 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:80684712-80684741
64251 chr4 6695708 6695708 1 + C T rs543945473 6695707 + 6695687 6695727 41 ATGATCATAGACGTCTTTTCCCGATATTCGGGCAGCGAGGG ATGATCATAGACGTCTTTTCCTGATATTCGGGCAGCGAGGG < 41bp 0.481603674774095 0.702200700944994 0.5845327 0.34583682 prediction 0.404401401889988 Functional Gain - S100P ENSG00000163993 CDS Human protein_coding chr4:6695707 chr4:6695708 stopgain 0.002 0 22 hm5C_associated_SNPs_128710 0 0 7 AUH POSTAR2 ENCODE chr4:6695704-6695772
64251 chr6 89855805 89855805 1 + C A rs112975118 89855801 + 89855781 89855821 41 CCTCTGGGCGCGTGCGCGGGCGGTCGCTACCTGCGGCCGAG CCTCTGGGCGCGTGCGCGGGCGGTAGCTACCTGCGGCCGAG < 41bp 0.694312450616281 0.896511560067783 0.38862404 0.5795707 prediction 0.404398218903004 Functional Gain - PM20D2 ENSG00000146281 UTR5 Human protein_coding chr6:89855801 chr6:89855805 . . 0 25 hm5C_associated_SNPs_128712 0 0 1 DDX3X POSTAR2 ENCODE chr6:89855803-89855918
64251 chr12 105150894 105150894 1 + C G BLCA 105150893 + 105150873 105150913 41 GCTCATCTACTGCTACGTGCCCAAGGTGGCCTGCACCAACT GCTCATCTACTGCTACGTGCCGAAGGTGGCCTGCACCAACT < 41bp 0.381356420872729 0.702187306255113 0.018235534 0.46780333 prediction 0.404374612510227 Functional Gain - CHST11 ENSG00000171310 CDS Human protein_coding chr12:105150893 chr12:105150894 synonymous SNV . 0 22 hm5C_associated_SNPs_128718 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:105150868-105150910
64251 chr19 1258228 1258228 1 + C G rs146271397 1258224 + 1258204 1258244 41 TGGCTGGGTGCTGGGGAGTTCCCCCCTCCGAGCCCTCCTTC TGGCTGGGTGCTGGGGAGTTCCCCGCTCCGAGCCCTCCTTC < 41bp 0.410826034318525 0.702182788981515 0.2847276 0.6747371 prediction 0.40436557796303 Functional Gain - MIDN ENSG00000167470 UTR3 Human protein_coding chr19:1258224 chr19:1258228 . . 0 25 hm5C_associated_SNPs_128721 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:1258134-1258235
64251 chr16 69356584 69356584 1 + T C GBM 69356582 + 69356562 69356602 41 GATGTCCCTGGGGACAAACTCTTAGAGCCTGTGGTTTGCAT GATGTCCCTGGGGACAAACTCTCAGAGCCTGTGGTTTGCAT < 41bp 0.414634604434319 0.702178898926954 0.048731774 0.07958427 prediction 0.404357797853909 Functional Gain - VPS4A ENSG00000132612 CDS Human protein_coding chr16:69356582 chr16:69356584 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_128722 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:69356519-69356603
64251 chr2 27665528 27665528 1 + C T LGG 27665527 + 27665507 27665547 41 CGTGAACCTGCTGCTGGGGGCCGTGCTGCATGGCACCGTCC CGTGAACCTGCTGCTGGGGGCTGTGCTGCATGGCACCGTCC < 41bp 0.471607427063126 0.702178419233897 0.4577179 0.34855205 prediction 0.404356838467794 Functional Gain - KRTCAP3 ENSG00000157992 CDS Human protein_coding chr2:27665527 chr2:27665528 synonymous SNV . 0 22 hm5C_associated_SNPs_128723 0 0 1 CSTF2T POSTAR2 ENCODE chr2:27665429-27665532
64251 chr2 62450246 62450246 1 + T C LGG 62450243 + 62450223 62450263 41 TACATCCCAGAAGTTGTTTACTCTGGCCTCTACCCACCCTA TACATCCCAGAAGTTGTTTACTCCGGCCTCTACCCACCCTA < 41bp 0.557353027164805 0.759524883998809 0.17596677 0.14252734 prediction 0.404343713668008 Functional Gain - B3GNT2 ENSG00000170340 CDS Human protein_coding chr2:62450243 chr2:62450246 synonymous SNV . 0 24 hm5C_associated_SNPs_128727 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr2:62450235-62450264
64251 chr17 38240916 38240916 1 + C T UCEC 38240915 + 38240895 38240935 41 CGTAAGCTGATTGAGCAGAACCGGGAGCGGCGGCGGAAGGA CGTAAGCTGATTGAGCAGAACTGGGAGCGGCGGCGGAAGGA < 41bp 0.634146262394375 0.836314295504497 0.86016333 0.8617337 prediction 0.404336066220244 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38240915 chr17:38240916 nonsynonymous SNV 0.995 5 22 hm5C_associated_SNPs_128729 0 0 1 EFTUD2 POSTAR2 ENCODE chr17:38240890-38240928
64251 chr17 72436247 72436247 1 + C T SKCM 72436246 + 72436226 72436266 41 TGTTTGCCTGTGTGGTGAAGCCCGACTTCTCCACCTGTGCC TGTTTGCCTGTGTGGTGAAGCTCGACTTCTCCACCTGTGCC < 41bp 0.625558853544234 0.827710540359542 0.1593503 0.16559762 prediction 0.404303373630616 Functional Gain - GPRC5C ENSG00000170412 CDS Human protein_coding chr17:72436246 chr17:72436247 nonsynonymous SNV 0.691 2 22 hm5C_associated_SNPs_128733 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819216 chr17:72436246-72436247
64251 chr3 100029267 100029267 1 + A G COAD 100029264 + 100029244 100029284 41 TAGGGTGAATCTCCTAATGGCTCAAGTGATAGAGGAATGAA TAGGGTGAATCTCCTAATGGCTCGAGTGATAGAGGAATGAA < 41bp 0.576466826657333 0.778609688902459 0.15417 0.2027187 prediction 0.404285724490252 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100029264 chr3:100029267 synonymous SNV . 0 24 hm5C_associated_SNPs_128734 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr3:100029247-100029275
64251 chr19 3121077 3121077 1 + A G SKCM 3121074 + 3121054 3121094 41 CAGCGACAAGATCATCTACTCACACTTCACGTGTGCCACCG CAGCGACAAGATCATCTACTCACGCTTCACGTGTGCCACCG < 41bp 0.464698054741983 0.702132979978281 0.067011386 0.28343254 prediction 0.404265959956561 Functional Gain - GNA11 ENSG00000088256 CDS Human protein_coding chr19:3121074 chr19:3121077 nonsynonymous SNV 0.965 5 24 hm5C_associated_SNPs_128738 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:3121021-3121081
64251 chr16 1825805 1825805 1 + C T UCEC 1825804 + 1825784 1825824 41 CTCTCTGTCCCCAGGCAGTACCGGGAATCCCAGGCCTTCTC CTCTCTGTCCCCAGGCAGTACTGGGAATCCCAGGCCTTCTC < 41bp 0.582050862804053 0.784181243513934 0.88191855 0.74949545 prediction 0.404260761419762 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825804 chr16:1825805 nonsynonymous SNV 0.224 0 22 hm5C_associated_SNPs_128739 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1825800-1825820
64251 chr2 32422793 32422793 1 + C T rs139761058 32422792 + 32422772 32422812 41 TTAGCTTGTGTGGAATTATTCCGGGACTTAGCAGTATCTTC TTAGCTTGTGTGGAATTATTCTGGGACTTAGCAGTATCTTC < 41bp 0.588925280606064 0.79105042172787 0.8978782 0.61358625 prediction 0.404250282243613 Functional Gain - SLC30A6 ENSG00000152683 CDS Human protein_coding chr2:32422792 chr2:32422793 nonsynonymous SNV 0.997 2 22 hm5C_associated_SNPs_128742 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr2:32422748-32422795
64251 chr5 10262700 10262700 1 + T C DLBC 10262697 + 10262677 10262717 41 GGAGGGGCTGCTGAGATATCCTGTGCCCTGGCAGTTAGCCA GGAGGGGCTGCTGAGATATCCTGCGCCCTGGCAGTTAGCCA < 41bp 0.585729560776521 0.787850456275082 0.37185207 0.42366374 prediction 0.404241790997122 Functional Gain - CCT5 ENSG00000150753 CDS Human protein_coding chr5:10262697 chr5:10262700 synonymous SNV . 0 24 hm5C_associated_SNPs_128745 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr5:10262660-10262726
64251 chr9 34249921 34249921 1 + C A UCEC 34249920 + 34249900 34249940 41 GGCTACTCGTACGAGTGTGTCCTCAGAGCCATGAAGAAGAA GGCTACTCGTACGAGTGTGTCATCAGAGCCATGAAGAAGAA < 41bp 0.44793622268836 0.702120818549188 0.094319284 0.33816805 prediction 0.404241637098375 Functional Gain - UBAP1 ENSG00000165006 CDS Human protein_coding chr9:34249920 chr9:34249921 nonsynonymous SNV 0.998 1 22 hm5C_associated_SNPs_128746 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr9:34249908-34249935
64251 chr8 87414410 87414410 1 + A G HNSC 87414407 + 87414387 87414427 41 ACACCAGCTCCAAAACCACTCGCATCTGAGCCTGCCGATGA ACACCAGCTCCAAAACCACTCGCGTCTGAGCCTGCCGATGA < 41bp 0.46498901288673 0.702119393587912 0.12249151 0.24402139 prediction 0.404238787175823 Functional Gain - WWP1 ENSG00000123124 CDS Human protein_coding chr8:87414407 chr8:87414410 synonymous SNV . 0 24 hm5C_associated_SNPs_128747 0 0 2 IGF2BP1 POSTAR2 ENCODE chr8:87414341-87414434
64251 chr19 50100319 50100319 1 + C T rs371811298 50100318 + 50100298 50100338 41 AAACTCGGAGGGCAAGGATCCCGCAGGCGCCTACCGCAGCC AAACTCGGAGGGCAAGGATCCTGCAGGCGCCTACCGCAGCC < 41bp 0.60134558061624 0.803464884366747 0.8316716 0.9016194 prediction 0.404238607501015 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50100318 chr19:50100319 synonymous SNV . 0 22 hm5C_associated_SNPs_128748 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:50100299-50100328
64251 chr6 170627614 170627614 1 + T A rs6905356 170627612 + 170627592 170627632 41 GAACCCAGGCAAGAAGTTCCCATGTGTTCAGACCCTGAACC GAACCCAGGCAAGAAGTTCCCAAGTGTTCAGACCCTGAACC < 41bp 0.52014988390716 0.722248343182921 0.46362224 0.61468333 prediction 0.404196918551521 Functional Gain - FAM120B ENSG00000112584 CDS Human protein_coding chr6:170627612 chr6:170627614 nonsynonymous SNV 0.059 1 23 hm5C_associated_SNPs_128751 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr6:170627560-170627631
64251 chr12 133294374 133294374 1 + C T COAD 133294373 + 133294353 133294393 41 CGCCCGTGTCTCATTGGAAGCCGGAAGCTGTGGTAAAAACC CGCCCGTGTCTCATTGGAAGCTGGAAGCTGTGGTAAAAACC < 41bp 0.615155806705014 0.817242788504844 0.7605984 0.35784525 prediction 0.40417396359966 Functional Gain - PGAM5 ENSG00000247077 CDS Human protein_coding chr12:133294373 chr12:133294374 nonsynonymous SNV 0.935 3 22 hm5C_associated_SNPs_128754 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:133294361-133294382
64251 chr9 127115854 127115854 1 - G A rs376017630 127115855 - 127115835 127115875 41 TGGCATCAGTGGGTGGCTGGCCGCGGTTCTGGAAGGTGGTG TGGCATCAGTGGGTGGCTGGCTGCGGTTCTGGAAGGTGGTG < 41bp 0.498686553176819 0.702086208152816 0.40197608 0.3982956 prediction 0.404172416305631 Functional Gain - LOC100129034 ENSG00000136930 UTR3 Human protein_coding chr9:127115855 chr9:127115854 . . 0 22 hm5C_associated_SNPs_128756 0 0 22 ATXN2 POSTAR2 DRA001158,DRS012390 chr9:127115780-127115868
64251 chr10 74034719 74034719 1 + C T LUAD 74034718 + 74034698 74034738 41 GTGGAGCAGGGCAAGAGCTGCCACAGCGTGGGCCAGCTGGC GTGGAGCAGGGCAAGAGCTGCTACAGCGTGGGCCAGCTGGC < 41bp 0.623643358155274 0.825724631389459 0.41049612 0.8049907 prediction 0.40416254646837 Functional Gain - DDIT4 ENSG00000168209 CDS Human protein_coding chr10:74034718 chr10:74034719 nonsynonymous SNV 0.995 4 22 hm5C_associated_SNPs_128758 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:74034703-74034733
64251 chr12 54396220 54396220 1 + C T GBM 54396219 + 54396199 54396239 41 TGTTTGGCCCTCCAGGCAACCCCGTGGCCAACTGGATTCAC TGTTTGGCCCTCCAGGCAACCTCGTGGCCAACTGGATTCAC < 41bp 0.622355699297448 0.82443665279937 0.26446742 0.44480008 prediction 0.404161907003844 Functional Gain - HOXC9 ENSG00000180806 CDS Human protein_coding chr12:54396219 chr12:54396220 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_128759 0 0 3 DHX30 POSTAR2 ENCODE chr12:54396181-54396244
64251 chr8 144465459 144465459 1 + C A rs73717540 144465458 + 144465438 144465478 41 AGGAGTCCCTGGTGTCGTGGCCCAGGTCTCATGGTGGCCCT AGGAGTCCCTGGTGTCGTGGCACAGGTCTCATGGTGGCCCT < 41bp 0.440754817967081 0.702067157110089 0.32411408 0.43370757 prediction 0.404134314220178 Functional Gain - RHPN1 ENSG00000158106 UTR3 Human protein_coding chr8:144465458 chr8:144465459 . . 0 22 hm5C_associated_SNPs_128761 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:144465431-144465463
64251 chr2 131103684 131103684 1 + C T SKCM 131103683 + 131103663 131103703 41 CAGGACGACTACATATCATTCCGGTGGGTCCACGGGCCATG CAGGACGACTACATATCATTCTGGTGGGTCCACGGGCCATG < 41bp 0.617522681535274 0.819579123417188 0.54263735 0.33818096 prediction 0.404112883763828 Functional Gain - IMP4 ENSG00000136718 CDS Human protein_coding chr2:131103683 chr2:131103684 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_128766 0 0 4 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr2:131103669-131103688
64251 chr20 61290066 61290066 1 + C G rs144204634 61290062 + 61290042 61290082 41 AGCGGCCATCCTGGGCCCAGCTGCCGGCTACCTGATTGGAG AGCGGCCATCCTGGGCCCAGCTGCGGGCTACCTGATTGGAG < 41bp 0.397489889593119 0.702053271647997 0.21475321 0.26401415 prediction 0.404106543295995 Functional Gain - SLCO4A1 ENSG00000101187 CDS Human protein_coding chr20:61290062 chr20:61290066 synonymous SNV . 0 25 hm5C_associated_SNPs_128768 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:61290031-61290074
64251 chr19 44611486 44611486 1 - G T UCEC 44611490 - 44611470 44611510 41 TGGTTTTTCTCCACTGTGGACTCGCTGATGTTTCAAAAGAC TGGTTTTTCTCCACTGTGGACTCGATGATGTTTCAAAAGAC < 41bp 0.293883286217938 0.702050386540957 0.13118908 0.48893625 prediction 0.404100773081913 Functional Gain - ZNF224 ENSG00000267680 CDS Human protein_coding chr19:44611490 chr19:44611486 nonsynonymous SNV 0.411 0 25 hm5C_associated_SNPs_128769 0 0 2 MOV10 POSTAR2 GSE37524,GSM921128 chr19:44611471-44611491
64251 chr1 154233542 154233542 1 + C T UCEC 154233541 + 154233521 154233561 41 TGCCATACTATACAGGGGTCCCGGGCCTCCCCAGCACCTTC TGCCATACTATACAGGGGTCCTGGGCCTCCCCAGCACCTTC < 41bp 0.454295762185241 0.702048080763732 0.052731395 0.015625 prediction 0.404096161527464 Functional Gain - UBAP2L ENSG00000143569 CDS Human protein_coding chr1:154233541 chr1:154233542 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_128770 0 0 6 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:154233522-154233543
64251 chr2 234372891 234372891 1 + C A COAD 234372890 + 234372870 234372910 41 CTCAGGAGGCTGGCAGACACCCCGTGGCTCTGCCAGTCCGC CTCAGGAGGCTGGCAGACACCACGTGGCTCTGCCAGTCCGC < 41bp 0.432129143059452 0.70204628342975 0.09086311 0.22985345 prediction 0.404092566859499 Functional Gain - DGKD ENSG00000077044 CDS Human protein_coding chr2:234372890 chr2:234372891 nonsynonymous SNV 0.791 0 22 hm5C_associated_SNPs_128771 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr2:234372858-234372896
64251 chr11 601608 601608 1 + C T SKCM 601607 + 601587 601627 41 AGTGCCGGGAAGAAAGAAAACCCCGTCCGGACCATCCGCAA AGTGCCGGGAAGAAAGAAAACTCCGTCCGGACCATCCGCAA < 41bp 0.442905618466787 0.702044298831228 0.041363478 0.0534437 prediction 0.404088597662456 Functional Gain - PHRF1 ENSG00000070047 CDS Human protein_coding chr11:601607 chr11:601608 synonymous SNV . 0 22 hm5C_associated_SNPs_128772 0 0 5 FMR1 POSTAR2 GSE39682,GSM977616 chr11:601605-601624
64251 chr9 33295205 33295205 1 + C A COAD 33295201 + 33295181 33295221 41 ACAGGAGGGCCACCGACATACAAACGCAGGACACAGAAACA ACAGGAGGGCCACCGACATACAAAAGCAGGACACAGAAACA < 41bp 0.280410508489623 0.702039225835921 0.17674676 0.16467965 prediction 0.404078451671843 Functional Gain - NFX1 ENSG00000086102 CDS Human protein_coding chr9:33295201 chr9:33295205 nonsynonymous SNV 0.939 0 25 hm5C_associated_SNPs_128776 0 0 1 LARP4 POSTAR2 ENCODE chr9:33295170-33295218
64251 chr3 171965350 171965350 1 + C T STAD 171965349 + 171965329 171965369 41 GAAGATAGTACTGGAGTCCGCCGGGTGGTGGTCACACCCCA GAAGATAGTACTGGAGTCCGCTGGGTGGTGGTCACACCCCA < 41bp 0.579328750010484 0.781362294324672 0.8784342 0.78512216 prediction 0.404067088628375 Functional Gain - FNDC3B ENSG00000075420 CDS Human protein_coding chr3:171965349 chr3:171965350 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_128779 0 0 4 HNRNPK POSTAR2 ENCODE chr3:171965342-171965465
64251 chr2 231327184 231327184 1 + C A rs35985492 231327180 + 231327160 231327200 41 TGAGGACTCTGAAGGATCCACTGACGTTGATGAGCCCTTAG TGAGGACTCTGAAGGATCCACTGAAGTTGATGAGCCCTTAG < 41bp 0.294861273515857 0.702031484460876 0.15009838 0.2184676 prediction 0.404062968921751 Functional Gain - SP100 ENSG00000067066 CDS Human protein_coding chr2:231327180 chr2:231327184 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_128780 0 0 1 PPIG POSTAR2 ENCODE chr2:231327160-231327262
64251 chr19 4941932 4941932 1 + C A rs17883422 4941928 + 4941908 4941948 41 CCCGCCCCTCAGCAGTGTTCCCAGCGAGGACGAGTGGTGAG CCCGCCCCTCAGCAGTGTTCCCAGAGAGGACGAGTGGTGAG < 41bp 0.295085246052147 0.702031107945248 0.25080693 0.42263824 prediction 0.404062215890497 Functional Gain - UHRF1 ENSG00000034063 ncRNA_exonic Human other chr19:4941928 chr19:4941932 . 0.003 0 25 hm5C_associated_SNPs_128781 0 0 2 NOL12 POSTAR2 ENCODE chr19:4941905-4941953
64251 chr1 227968263 227968263 1 + C G rs117271761 227968262 + 227968242 227968282 41 GAAGGGGCTGGCCCTGGAGGCCGAGAGTGAGCTGGAGAGAC GAAGGGGCTGGCCCTGGAGGCGGAGAGTGAGCTGGAGAGAC < 41bp 0.380980877101973 0.702030521333146 0.6900935 0.9043411 prediction 0.404061042666292 Functional Gain - SNAP47 ENSG00000143740 CDS Human protein_coding chr1:227968262 chr1:227968263 synonymous SNV . 0 22 hm5C_associated_SNPs_128782 0 0 8 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:227968227-227968291
64251 chr12 123254678 123254678 1 + T A rs144666710 123254676 + 123254656 123254696 41 TATACTAAAAGCCTTAAAACCATGTATGTGCGCTGTTTGAA TATACTAAAAGCCTTAAAACCAAGTATGTGCGCTGTTTGAA < 41bp 0.522258388149666 0.724283497026306 0.40706754 0.48080364 prediction 0.404050217753279 Functional Gain - DENR ENSG00000139726 UTR3 Human protein_coding chr12:123254676 chr12:123254678 . . 0 23 hm5C_associated_SNPs_128788 0 0 14 TARDBP POSTAR2 DRA001158,DRS012387 chr12:123254353-123254698
64251 chr5 33457407 33457407 1 + C T STAD 33457406 + 33457386 33457426 41 AAAGCAGATATGGAGACTCTCCAGAGAATTTATGGCATTTC AAAGCAGATATGGAGACTCTCTAGAGAATTTATGGCATTTC < 41bp 0.63671387112036 0.838738899257282 0.522401 0.26364252 prediction 0.404050056273844 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33457406 chr5:33457407 stopgain 0.980 1 22 hm5C_associated_SNPs_128789 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:33457371-33457496
64251 chr11 93431677 93431677 1 + A G UCEC 93431674 + 93431654 93431694 41 ATTGGAGAAAAGAATTTCTTCTGAACAGACTGGCACCTCCT ATTGGAGAAAAGAATTTCTTCTGGACAGACTGGCACCTCCT < 41bp 0.460701935975345 0.702022430105261 0.19951391 0.47058737 prediction 0.404044860210522 Functional Gain - CEP295 ENSG00000166004 CDS Human protein_coding chr11:93431674 chr11:93431677 nonsynonymous SNV 0.058 1 24 hm5C_associated_SNPs_128792 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr11:93431665-93431704
64251 chr2 183582849 183582849 1 + A G LIHC 183582846 + 183582826 183582866 41 TTAAATAAAGATGACTATATCAGAGACTTGAAAAGGATCAT TTAAATAAAGATGACTATATCAGGGACTTGAAAAGGATCAT < 41bp 0.476272875434014 0.702019533664796 0.89374137 0.90728796 prediction 0.404039067329591 Functional Gain - DNAJC10 ENSG00000077232 CDS Human protein_coding chr2:183582846 chr2:183582849 synonymous SNV . 0 24 hm5C_associated_SNPs_128794 0 0 5 WDR33 POSTAR2 GSE61123,GSM1496985 chr2:183582825-183582854
64251 chr16 28834769 28834769 1 + C A rs1140131 28834768 + 28834748 28834788 41 CCCCTGCCTGGGGCCTGTGGCCGCTGCCGGGAGCGGGCTCC CCCCTGCCTGGGGCCTGTGGCAGCTGCCGGGAGCGGGCTCC < 41bp 0.600445712826296 0.802457861393431 0.605805 0.9126587 prediction 0.40402429713427 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28834768 chr16:28834769 synonymous SNV . 0 22 hm5C_associated_SNPs_128795 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:28834764-28834789
64251 chr6 33177831 33177831 1 + C T UCEC 33177830 + 33177810 33177850 41 CATCAAGACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAA CATCAAGACCGAGTGCTTATCTGCCTGAGCCGCCTGCACAA < 41bp 0.571313929613839 0.773324776703497 0.24625054 0.14228833 prediction 0.404021694179317 Functional Gain - RING1 ENSG00000204227 CDS Human protein_coding chr6:33177830 chr6:33177831 nonsynonymous SNV 0.955 5 22 hm5C_associated_SNPs_128796 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr6:33177810-33177844
64251 chr8 23115565 23115565 1 + C T HNSC 23115564 + 23115544 23115584 41 AGGTGTAAAGAAGAAGCCCGCCGGGCATGCCGAGCAGGAAA AGGTGTAAAGAAGAAGCCCGCTGGGCATGCCGAGCAGGAAA < 41bp 0.44897573368747 0.702009164826216 0.39188674 0.2562877 prediction 0.404018329652431 Functional Gain - CHMP7 ENSG00000147457 CDS Human protein_coding chr8:23115564 chr8:23115565 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_128797 0 0 4 EFTUD2 POSTAR2 ENCODE chr8:23115530-23115602
64251 chr4 26433828 26433828 1 + C A rs76994449 26433827 + 26433807 26433847 41 TGGTAGAATGAGGAAAATGTCCGCAAAAGCATGTTTTATTA TGGTAGAATGAGGAAAATGTCAGCAAAAGCATGTTTTATTA < 41bp 0.641864704908272 0.843873162779295 0.06122312 0.2173475 prediction 0.404016915742045 Functional Gain - RBPJ ENSG00000168214 UTR3 Human protein_coding chr4:26433827 chr4:26433828 . . 0 22 hm5C_associated_SNPs_128799 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:26433667-26433837
64251 chr1 161928390 161928390 1 + C T UCEC 161928389 + 161928369 161928409 41 CACCTTCTTTGGCTCCCCTCCCGCAGCCACAGAGGCAACCC CACCTTCTTTGGCTCCCCTCCTGCAGCCACAGAGGCAACCC < 41bp 0.439471592907181 0.702008036615825 0.08505702 0.05547777 prediction 0.40401607323165 Functional Gain - ATF6 ENSG00000118217 CDS Human protein_coding chr1:161928389 chr1:161928390 synonymous SNV . 0 22 hm5C_associated_SNPs_128800 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:161928363-161928398
64251 chr1 117910137 117910137 1 + T G rs9783031 117910134 + 117910114 117910154 41 CCGGACTCAGGTGTTTCGGACGCTATTGCCCTTCGCGCCAG CCGGACTCAGGTGTTTCGGACGCGATTGCCCTTCGCGCCAG < 41bp 0.724030222900685 0.92602050236423 0.4625024 0.8926083 prediction 0.403980558927091 Functional Gain - MAN1A2 ENSG00000198162 UTR5 Human protein_coding chr1:117910134 chr1:117910137 . . 0 24 hm5C_associated_SNPs_128809 0 0 16 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr1:117910099-117910140
64251 chr18 56819782 56819782 1 + C T SKCM 56819781 + 56819761 56819801 41 TTTCCAGTGGCAGTATGGAGCCGGCCTTTCACAGAGGAGAC TTTCCAGTGGCAGTATGGAGCTGGCCTTTCACAGAGGAGAC < 41bp 0.462150293860798 0.701989804079912 0.0505338 0.06504035 prediction 0.403979608159825 Functional Gain - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56819781 chr18:56819782 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_128810 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chr18:56819774-56819794
64251 chr7 17379818 17379818 1 + C T GBM 17379817 + 17379797 17379837 41 TGGGTCAGATGCAGTACAATCCAGTACTGCCAGGCCAACAG TGGGTCAGATGCAGTACAATCTAGTACTGCCAGGCCAACAG < 41bp 0.459294599614762 0.701980694023324 0.51522774 0.26502997 prediction 0.403961388046648 Functional Gain - AHR ENSG00000106546 CDS Human protein_coding chr7:17379817 chr7:17379818 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_128811 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:17379800-17379832
64251 chr16 19126456 19126456 1 + T C UCEC 19126453 + 19126433 19126473 41 CATCGGGGGCCTCGGGGGGCCACTGGCTTCGGGACTGCAAA CATCGGGGGCCTCGGGGGGCCACCGGCTTCGGGACTGCAAA < 41bp 0.521799406266029 0.723769151941934 0.6798525 0.8914679 prediction 0.40393949135181 Functional Gain - ITPRIPL2 ENSG00000205730 CDS Human protein_coding chr16:19126453 chr16:19126456 nonsynonymous SNV 0.862 1 24 hm5C_associated_SNPs_128818 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:19126409-19126468
64251 chr5 176863243 176863243 1 + C T STAD 176863242 + 176863222 176863262 41 GGAGGTCCCCGAGGAGTATTCCGAGCGCTTTTCCCCGCAGG GGAGGTCCCCGAGGAGTATTCTGAGCGCTTTTCCCCGCAGG < 41bp 0.612177132239788 0.8141465774414 0.90253204 0.85219234 prediction 0.403938890403224 Functional Gain - GRK6 ENSG00000198055 CDS Human protein_coding chr5:176863242 chr5:176863243 synonymous SNV . 0 22 hm5C_associated_SNPs_128819 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr5:176863227-176863265
64251 chr9 35609518 35609518 1 + C A OV 35609514 + 35609494 35609534 41 GCCCTGGAGCGGACAGAACCCTCGCCACCCCCTTCAGCTCC GCCCTGGAGCGGACAGAACCCTCGACACCCCCTTCAGCTCC < 41bp 0.743958748115987 0.945924442051995 0.30951047 0.82879716 prediction 0.403931387872016 Functional Gain - TESK1 ENSG00000107140 CDS Human protein_coding chr9:35609514 chr9:35609518 nonsynonymous SNV 0.867 2 25 hm5C_associated_SNPs_128820 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:35609491-35609544
64251 chr20 62373796 62373796 1 + T C rs141335773 62373793 + 62373773 62373813 41 CGGGCTGTCCAGCCTGACTCCAGTGTCCCCCACGGCCTCCA CGGGCTGTCCAGCCTGACTCCAGCGTCCCCCACGGCCTCCA < 41bp 0.536271894939168 0.738227317962549 0.3139611 0.5708681 prediction 0.403910846046762 Functional Gain - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373793 chr20:62373796 nonsynonymous SNV 0.247 0 24 hm5C_associated_SNPs_128827 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr20:62373759-62373803
64251 chr19 580412 580412 1 + C A UCEC 580411 + 580391 580431 41 CGACCAGTGGGGAGAGTACTCCTGCGTCTTCCTCCCCGAGC CGACCAGTGGGGAGAGTACTCATGCGTCTTCCTCCCCGAGC < 41bp 0.432712988555387 0.701953545863074 0.29670662 0.48566058 prediction 0.403907091726149 Functional Gain - BSG ENSG00000172270 CDS Human protein_coding chr19:580411 chr19:580412 synonymous SNV . 0 22 hm5C_associated_SNPs_128831 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:580380-580440
64251 chr22 38084910 38084910 1 + T C rs61737838 38084907 + 38084887 38084927 41 CAGCAAAGACGGAGTCGGTGCAGTATGACCACCCCAACCAC CAGCAAAGACGGAGTCGGTGCAGCATGACCACCCCAACCAC < 41bp 0.557414638918384 0.759366792740327 0.050558716 0.04952687 prediction 0.403904307643886 Functional Gain - NOL12 ENSG00000100101 CDS Human protein_coding chr22:38084907 chr22:38084910 nonsynonymous SNV 0.980 5 24 hm5C_associated_SNPs_128832 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:38084900-38084931
64251 chr4 174090096 174090096 1 + C T LUSC 174090095 + 174090075 174090115 41 CGCGGCCGGACGACCCAAGCCCGCTGAGCAGGATGAGGGTG CGCGGCCGGACGACCCAAGCCTGCTGAGCAGGATGAGGGTG < 41bp 0.564818003429948 0.766763221463445 0.3148908 0.22271681 prediction 0.403890436066993 Functional Gain - GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174090095 chr4:174090096 nonsynonymous SNV 0.998 3 22 hm5C_associated_SNPs_128836 0 0 4 DDX3X POSTAR2 ENCODE chr4:174089934-174090113
64251 chr5 150858983 150858983 1 + C T rs138339360 150858982 + 150858962 150859002 41 CATCATCCCCTTCTTTGTGTCCCGAGCGCCCGAGCACTGTG CATCATCCCCTTCTTTGTGTCTCGAGCGCCCGAGCACTGTG < 41bp 0.66524729523309 0.867192470236345 0.112327754 0.28729814 prediction 0.40389035000651 Functional Gain - SLC36A1 ENSG00000123643 CDS Human protein_coding chr5:150858982 chr5:150858983 synonymous SNV . 0 22 hm5C_associated_SNPs_128837 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chr5:150858978-150859019
64251 chr2 74432916 74432916 1 + C A LGG 74432915 + 74432895 74432935 41 GGAGGTAGAAGAGTGGGTGGCCTCAGGCAACAAACGGCCAC GGAGGTAGAAGAGTGGGTGGCATCAGGCAACAAACGGCCAC < 41bp 0.510285277733136 0.712229225152361 0.48602366 0.64307445 prediction 0.40388789483845 Functional Gain - MTHFD2 ENSG00000065911 CDS Human protein_coding chr2:74432915 chr2:74432916 synonymous SNV . 0 22 hm5C_associated_SNPs_128839 0 0 6 SRRM4 POSTAR2 GSE57278,GSM1378374 chr2:74432900-74432920
64251 chr19 10531491 10531491 1 + C T rs117495488 10531490 + 10531470 10531510 41 GAGCCTGTCTCTGTCACTGCCCGGGCCCCGGGAGGGCCAGG GAGCCTGTCTCTGTCACTGCCTGGGCCCCGGGAGGGCCAGG < 41bp 0.47516463134144 0.701939603095879 0.38994816 0.34411108 prediction 0.403879206191757 Functional Gain - PDE4A ENSG00000065989 CDS Human protein_coding chr19:10531490 chr19:10531491 synonymous SNV . 0 22 hm5C_associated_SNPs_128841 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:10531466-10531508
64251 chr19 37288619 37288619 1 + C G rs78181802 37288618 + 37288598 37288638 41 ACTGGGACTCGGGCTGCGTCCCGGCCCTTCCACATCGGTCC ACTGGGACTCGGGCTGCGTCCGGGCCCTTCCACATCGGTCC < 41bp 0.678200519675596 0.880139265660403 0.076699406 0.8194236 prediction 0.403877491969614 Functional Gain - ZNF790-AS1 ENSG00000267254 ncRNA_exonic Human antisense chr19:37288618 chr19:37288619 . . 0 22 hm5C_associated_SNPs_128843 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917662 chr19:37288600-37288640
64251 chr19 30934557 30934557 1 + T C UCEC 30934554 + 30934534 30934574 41 GTGGCCCCGTCCTCAACGGCCAGTATGCCATGAGTCAGAAG GTGGCCCCGTCCTCAACGGCCAGCATGCCATGAGTCAGAAG < 41bp 0.512780407997097 0.714718888421903 0.1763263 0.106794596 prediction 0.403876960849611 Functional Gain - ZNF536 ENSG00000198597 CDS Human protein_coding chr19:30934554 chr19:30934557 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_128845 0 0 2 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:30934542-30934567
64251 chr15 23812341 23812341 1 + C A SARC 23812337 + 23812317 23812357 41 AGGAGCTTGTCGTGCTTCGGCTGGCCAGTCTGTTGTTTAAG AGGAGCTTGTCGTGCTTCGGCTGGACAGTCTGTTGTTTAAG < 41bp 0.295754008512671 0.701936035291727 0.1326012 0.17917112 prediction 0.403872070583454 Functional Gain - MKRN3 ENSG00000179455 CDS Human protein_coding chr15:23812337 chr15:23812341 nonsynonymous SNV 0.354 2 25 hm5C_associated_SNPs_128847 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr15:23812331-23812357
64251 chr4 103500113 103500113 1 + T G STAD 103500111 + 103500091 103500131 41 GACCTCAGCGTGGTGCGGCTCATGTTTACAGCTTTTCTTCC GACCTCAGCGTGGTGCGGCTCAGGTTTACAGCTTTTCTTCC < 41bp 0.342227006120048 0.701927982313721 0.15745285 0.83669984 prediction 0.403855964627442 Functional Gain - NFKB1 ENSG00000109320 CDS Human protein_coding chr4:103500111 chr4:103500113 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_128850 0 0 2 UPF1 POSTAR2 GSE47976,GSM1163975 chr4:103500113-103500114
64251 chr6 137191098 137191098 1 + T C UCEC 137191095 + 137191075 137191115 41 CTTAAGGAATGTACGACAACCAGTGTTTGAACTTCTTGGTC CTTAAGGAATGTACGACAACCAGCGTTTGAACTTCTTGGTC < 41bp 0.539455254419811 0.741377088346192 0.15180966 0.30984318 prediction 0.403843667852763 Functional Gain - PEX7 ENSG00000112357 CDS Human protein_coding chr6:137191095 chr6:137191098 nonsynonymous SNV 0.988 0 24 hm5C_associated_SNPs_128852 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr6:137191025-137191115
64251 chr19 47258899 47258899 1 + C T rs111754012 47258898 + 47258878 47258918 41 GGCATTTGACAACGCGGTGCCCGAGCTGGTAGACTCCTTCC GGCATTTGACAACGCGGTGCCTGAGCTGGTAGACTCCTTCC < 41bp 0.582172439256872 0.784082821096611 0.15912956 0.166531 prediction 0.403820763679479 Functional Gain - FKRP ENSG00000181027 CDS Human protein_coding chr19:47258898 chr19:47258899 synonymous SNV . 0 22 hm5C_associated_SNPs_128859 2 0 3 SRRM4 POSTAR2 GSE57278,GSM1378374 chr19:47258880-47258900
64251 chr14 69995122 69995122 1 + C G UCEC 69995118 + 69995098 69995138 41 CCTGGAGCCCCCTCGGCACTCTCCCGGGGTGGAAAGTGATG CCTGGAGCCCCCTCGGCACTCTCCGGGGGTGGAAAGTGATG < 41bp 0.401431443831689 0.701907632501144 0.04716009 0.136098 prediction 0.403815265002288 Functional Gain - PLEKHD1 ENSG00000175985 CDS Human protein_coding chr14:69995118 chr14:69995122 nonsynonymous SNV 0.019 1 25 hm5C_associated_SNPs_128861 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr14:69995117-69995141
64251 chr11 123777159 123777159 1 + C T LUAD 123777158 + 123777138 123777178 41 AATGGGTGTAAAAAACCATTCCACAGTGACTGAGTTTCTTC AATGGGTGTAAAAAACCATTCTACAGTGACTGAGTTTCTTC < 41bp 0.551653464071487 0.75356042021306 0.04931864 0.48444104 prediction 0.403813912283145 Functional Gain - OR8D4 ENSG00000181518 CDS Human protein_coding chr11:123777158 chr11:123777159 synonymous SNV . 0 22 hm5C_associated_SNPs_128862 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:123777146-123777169
64251 chr2 143799664 143799664 1 + T C KIRC 143799661 + 143799641 143799681 41 TTCGAGTGGCTCCAGTTCCTCTCTATAATTCTTTCCATGAT TTCGAGTGGCTCCAGTTCCTCTCCATAATTCTTTCCATGAT < 41bp 0.591567546023542 0.793469387683802 0.483504 0.9509299 prediction 0.403803683320521 Functional Gain - KYNU ENSG00000115919 CDS Human protein_coding chr2:143799661 chr2:143799664 nonsynonymous SNV 0.997 4 24 hm5C_associated_SNPs_128863 0 0 1 U2AF2 POSTAR2 ENCODE chr2:143799600-143799679
64251 chr4 55564680 55564680 1 + C A GBM 55564679 + 55564659 55564699 41 TGTCTGCATTGTTCTGTGGACCAGGAGGGCAAGTCAGTGCT TGTCTGCATTGTTCTGTGGACAAGGAGGGCAAGTCAGTGCT < 41bp 0.429435761723032 0.701890481067742 0.21043557 0.45048434 prediction 0.403780962135484 Functional Gain - KIT ENSG00000157404 CDS Human protein_coding chr4:55564679 chr4:55564680 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_128867 0 0 1 LIN28A POSTAR2 GSE39873,GSM980593 chr4:55564660-55564680
64251 chr9 21802922 21802922 1 + C A rs117769854 21802918 + 21802898 21802938 41 GGGGAGGGACTGGGGCGCGGCACTCGGGACTCACTTGCCGC GGGGAGGGACTGGGGCGCGGCACTAGGGACTCACTTGCCGC < 41bp 0.327292384358286 0.701887741962764 0.16745785 0.596021 prediction 0.403775483925528 Functional Gain - MTAP ENSG00000099810 CDS Human protein_coding chr9:21802918 chr9:21802922 synonymous SNV . 0 25 hm5C_associated_SNPs_128868 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr9:21802912-21802939
64251 chr7 98990326 98990326 1 + T C LIHC 98990323 + 98990303 98990343 41 TGCTTCCCGGTGCTGTTCACCTATGACGCCGCCGCGGGGAT TGCTTCCCGGTGCTGTTCACCTACGACGCCGCCGCGGGGAT < 41bp 0.495464019320182 0.701886830499566 0.100358844 0.07645619 prediction 0.403773660999132 Functional Gain - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98990323 chr7:98990326 synonymous SNV . 0 24 hm5C_associated_SNPs_128869 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr7:98990300-98990344
64251 chr12 123463717 123463717 1 + C T SKCM 123463716 + 123463696 123463736 41 GGCGGCCAGCTGCATGGAGCCCGGCCCTTGGGCACTGGTGA GGCGGCCAGCTGCATGGAGCCTGGCCCTTGGGCACTGGTGA < 41bp 0.562918534110096 0.764792003904919 0.4161858 0.37382525 prediction 0.403746939589646 Functional Gain - OGFOD2 ENSG00000111325 CDS Human protein_coding chr12:123463716 chr12:123463717 nonsynonymous SNV 0.936 3 22 hm5C_associated_SNPs_128873 0 0 3 DDX55 POSTAR2 ENCODE chr12:123463714-123463792
64251 chr1 233765504 233765504 1 + A G rs16859323 233765501 + 233765481 233765521 41 AGGGTGTGATGCTCCGTAGTCGCAGGGATGAAGGAAAACCA AGGGTGTGATGCTCCGTAGTCGCGGGGATGAAGGAAAACCA < 41bp 0.570580510343799 0.772447376131244 0.8907572 0.9056415 prediction 0.403733731574889 Functional Gain - KCNK1 ENSG00000135750 UTR5 Human protein_coding chr1:233765501 chr1:233765504 . . 0 24 hm5C_associated_SNPs_128876 0 0 2 CSTF2 POSTAR2 GSE40859,GSM1003588 chr1:233765485-233765506
64251 chr3 152881514 152881514 1 + T G rs73872932 152881512 + 152881492 152881532 41 CTAGTTCCAAGTTTTAAATACATGGAAGGAAGTCCGGGAGA CTAGTTCCAAGTTTTAAATACAGGGAAGGAAGTCCGGGAGA < 41bp 0.366569712362761 0.701864467387453 0.3193696 0.7441546 prediction 0.403728934774907 Functional Gain - RAP2B ENSG00000181467 UTR3 Human protein_coding chr3:152881512 chr3:152881514 . . 0 23 hm5C_associated_SNPs_128878 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714641 chr3:152881476-152881556
64251 chr6 76564953 76564953 1 + A G rs2273857 76564950 + 76564930 76564970 41 GATCTTCGAGTAAGTTTGACCACAAGAGTCATGCTAACAAC GATCTTCGAGTAAGTTTGACCACGAGAGTCATGCTAACAAC < 41bp 0.590473270963062 0.792334246623323 0.08084735 0.17550418 prediction 0.403721951320523 Functional Gain - MYO6 ENSG00000196586 CDS Human protein_coding chr6:76564950 chr6:76564953 synonymous SNV . 0 24 hm5C_associated_SNPs_128879 3 0 2 EIF3H POSTAR2 ENCODE chr6:76564915-76564985
64251 chr9 139977209 139977209 1 + C A rs7851653 139977208 + 139977188 139977228 41 CAGACTGTCCCCAGACTCCCCCGAGACCTGCCAGCCCCGGC CAGACTGTCCCCAGACTCCCCAGAGACCTGCCAGCCCCGGC < 41bp 0.435918138987858 0.701854458227647 0.49273413 0.7983835 prediction 0.403708916455294 Functional Gain - UAP1L1 ENSG00000197355 UTR3 Human protein_coding chr9:139977208 chr9:139977209 . . 0 22 hm5C_associated_SNPs_128881 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:139977180-139977225
64251 chr15 43693956 43693956 1 + A G DLBC 43693953 + 43693933 43693973 41 AGTTCTCCCAGCTGCTTCATCAGATCAATTCTACCCGAGAC AGTTCTCCCAGCTGCTTCATCAGGTCAATTCTACCCGAGAC < 41bp 0.450630307154711 0.701851734971989 0.6097799 0.8581858 prediction 0.403703469943979 Functional Gain - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43693953 chr15:43693956 nonsynonymous SNV 0.999 1 24 hm5C_associated_SNPs_128882 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:43693946-43693958
64251 chr5 7892968 7892968 1 + T C LUAD 7892965 + 7892945 7892985 41 GCTGGCCTTGTTGGTTGCTTCAGTTCTTCAGCCAAACATAC GCTGGCCTTGTTGGTTGCTTCAGCTCTTCAGCCAAACATAC < 41bp 0.494617818326729 0.701851244187531 0.37391782 0.4259585 prediction 0.403702488375061 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7892965 chr5:7892968 nonsynonymous SNV 0.143 0 24 hm5C_associated_SNPs_128883 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr5:7892954-7892981
64251 chr2 136399355 136399355 1 + A G rs116803765 136399352 + 136399332 136399372 41 TGGCAGTATTCTGATCAACCCACAAACAGGTTGGTATCCAG TGGCAGTATTCTGATCAACCCACGAACAGGTTGGTATCCAG < 41bp 0.467773150242279 0.701851123299603 0.02936253 0.20451906 prediction 0.403702246599205 Functional Gain - R3HDM1 ENSG00000048991 CDS Human protein_coding chr2:136399352 chr2:136399355 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_128884 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr2:136399354-136399387
64251 chr2 241570391 241570391 1 + A G rs2975786 241570388 + 241570368 241570408 41 TGGAACCAGTAGCAAGGAGCCCGAGATCAGCCCTGAACTCA TGGAACCAGTAGCAAGGAGCCCGGGATCAGCCCTGAACTCA < 41bp 0.593022468303877 0.794871690806055 0.81923044 0.8911195 prediction 0.403698445004356 Functional Gain - GPR35 ENSG00000178623 UTR3 Human protein_coding chr2:241570388 chr2:241570391 . . 0 24 hm5C_associated_SNPs_128888 0 0 1 GRSF1 POSTAR2 ENCODE chr2:241570335-241570394
64251 chr6 33374387 33374387 1 + C T UCEC 33374386 + 33374366 33374406 41 TAGGAGTCCCACGTGCCTTACCGGAACAGCAAACTGACCTA TAGGAGTCCCACGTGCCTTACTGGAACAGCAAACTGACCTA < 41bp 0.446469932371464 0.70184726990276 0.8558267 0.41113523 prediction 0.403694539805521 Functional Gain - KIFC1 ENSG00000237649 CDS Human protein_coding chr6:33374386 chr6:33374387 nonsynonymous SNV 0.999 5 22 hm5C_associated_SNPs_128889 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr6:33374366-33374394
64251 chr10 123845219 123845219 1 + C T rs373281844 123845218 + 123845198 123845238 41 AGCCCTGGCGCCCGCCAGCCCCGGAGTCACACCCACCCAGG AGCCCTGGCGCCCGCCAGCCCTGGAGTCACACCCACCCAGG < 41bp 0.557018967086128 0.758860271582267 0.9320892 0.8987124 prediction 0.403682608992277 Functional Gain - TACC2 ENSG00000138162 CDS Human protein_coding chr10:123845218 chr10:123845219 synonymous SNV . 0 22 hm5C_associated_SNPs_128894 0 0 2 EIF3H POSTAR2 ENCODE chr10:123845161-123845230
64251 chr22 30054251 30054251 1 + C T CHOL 30054250 + 30054230 30054270 41 GGTGTGAACTACTTTGCAATCCGGGTGTGTTGAAACCTCTC GGTGTGAACTACTTTGCAATCTGGGTGTGTTGAAACCTCTC < 41bp 0.578168876947041 0.779998289231636 0.89042616 0.4612447 prediction 0.403658824569189 Functional Gain - NF2 ENSG00000186575 CDS Human protein_coding chr22:30054250 chr22:30054251 nonsynonymous SNV 1.000 5 22 hm5C_associated_SNPs_128898 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:30054192-30054274
64251 chr19 3208827 3208827 1 + A G rs312073 3208824 + 3208804 3208844 41 TGGGGCCACCCTTCCTGGAACTCAGAGAGGAAGGTCCGGGC TGGGGCCACCCTTCCTGGAACTCGGAGAGGAAGGTCCGGGC < 41bp 0.597780843152424 0.799609507488064 0.43718728 0.8513582 prediction 0.403657328671281 Functional Gain - NCLN ENSG00000125912 UTR3 Human protein_coding chr19:3208824 chr19:3208827 . . 0 24 hm5C_associated_SNPs_128899 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:3208803-3208828
64251 chr19 56185322 56185322 1 + T C UCEC 56185319 + 56185299 56185339 41 GATCTTTGTGGAGTTCACCTCTGTGTTTGACTGCCAGAAAG GATCTTTGTGGAGTTCACCTCTGCGTTTGACTGCCAGAAAG < 41bp 0.566339787418631 0.768163168263456 0.18306378 0.19475418 prediction 0.40364676168965 Functional Gain - U2AF2 ENSG00000063244 CDS Human protein_coding chr19:56185319 chr19:56185322 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_128901 0 0 40 CSTF2T POSTAR2 GSE37401,GSM917677 chr19:56185297-56185342
64251 chr9 35674097 35674097 1 + C T LAML 35674096 + 35674076 35674116 41 GCCCCGGATGCAGGAGGATTCCCCCTTGGGAGGAGGCTCTT GCCCCGGATGCAGGAGGATTCTCCCTTGGGAGGAGGCTCTT < 41bp 0.463325561529848 0.70181906291975 0.75870204 0.89505523 prediction 0.403638125839501 Functional Gain - CA9 ENSG00000107159 CDS Human protein_coding chr9:35674096 chr9:35674097 synonymous SNV . 0 22 hm5C_associated_SNPs_128904 0 0 3 DDX3X POSTAR2 ENCODE chr9:35674080-35674124
64251 chr11 66433853 66433853 1 + C T rs144112838 66433852 + 66433832 66433872 41 CAGTTCTGCTAGGGTGAGACCCGAATTTGGATCCCCAACAG CAGTTCTGCTAGGGTGAGACCTGAATTTGGATCCCCAACAG < 41bp 0.579399113425655 0.781212064914643 0.68755555 0.4734522 prediction 0.403625902977975 Functional Gain - RBM4 ENSG00000258297 ncRNA_exonic Human antisense chr11:66433852 chr11:66433853 . . 0 22 hm5C_associated_SNPs_128906 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:66433786-66433934
64251 chr11 117058366 117058366 1 + T C COAD 117058363 + 117058343 117058383 41 GAGAATGTTTCTGGATCTACCGATGGTCTGGTTGACAGCGC GAGAATGTTTCTGGATCTACCGACGGTCTGGTTGACAGCGC < 41bp 0.547955178935791 0.749765894315914 0.25198188 0.8658124 prediction 0.403621430760247 Functional Gain - SIDT2 ENSG00000149577 CDS Human protein_coding chr11:117058363 chr11:117058366 synonymous SNV . 0 24 hm5C_associated_SNPs_128907 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr11:117058349-117058376
64251 chr10 51584664 51584664 1 + A G UCEC 51584661 + 51584641 51584681 41 TCAATAATGTCGGGGGAAACCTAAAGGGCTTAGAAAACTGG TCAATAATGTCGGGGGAAACCTAGAGGGCTTAGAAAACTGG < 41bp 0.578244692737335 0.780035664884219 0.12816918 0.10980928 prediction 0.403581944293769 Functional Gain - NCOA4 ENSG00000138293 CDS Human other chr10:51584661 chr10:51584664 nonsynonymous SNV . 0 24 hm5C_associated_SNPs_128917 0 0 5 FMR1 POSTAR2 GSE39682,GSM977615 chr10:51584616-51584666
64251 chr7 99965137 99965137 1 + C T rs140187391 99965136 + 99965116 99965156 41 AGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCTG AGGACCTTTAAAAGGCAAAGCTGCAAGGCAGAAGGAGGCTG < 41bp 0.557483925903426 0.759273204606207 0.091658175 0.12286505 prediction 0.403578557405562 Functional Gain - STAG3L5P-PVRIG2P-PILRB ENSG00000272752 ncRNA_exonic Human processed_transcript chr7:99965136 chr7:99965137 . . 0 22 hm5C_associated_SNPs_128919 0 0 4 RBM15B POSTAR2 GSE78030,GSM2064711 chr7:99965120-99965140
64251 chr10 22606902 22606902 1 + C T HNSC 22606901 + 22606881 22606921 41 ATACTAGAGGCAGGAAAGCACCGAGCTGACAAGTCAACTCT ATACTAGAGGCAGGAAAGCACTGAGCTGACAAGTCAACTCT < 41bp 0.458042294322478 0.701786237077507 0.23037645 0.2544662 prediction 0.403572474155014 Functional Gain - COMMD3;COMMD3-BMI1 ENSG00000148444;ENSG00000269897 CDS Human other chr10:22606901 chr10:22606902 stopgain 0.721 0 22 hm5C_associated_SNPs_128922 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr10:22606881-22606908
64251 chr2 191045697 191045697 1 + C A rs540059836 191045693 + 191045673 191045713 41 GGCCTCAGCTGCCGCCCGCCCAGACGCCAGCAAGCCCCCCT GGCCTCAGCTGCCGCCCGCCCAGAAGCCAGCAAGCCCCCCT < 41bp 0.716829402240863 0.918611815689929 0.23723832 0.41121975 prediction 0.403564826898132 Functional Gain - C2orf88 ENSG00000187699 UTR5 Human protein_coding chr2:191045693 chr2:191045697 . . 0 25 hm5C_associated_SNPs_128924 0 0 3 DDX3X POSTAR2 ENCODE chr2:191045648-191045699
64251 chr15 91292892 91292892 1 + C T SKCM 91292891 + 91292871 91292911 41 ACACCAACTGTAAAGAAATCCCGGGATACTGCTCTCAAGAA ACACCAACTGTAAAGAAATCCTGGGATACTGCTCTCAAGAA < 41bp 0.481290493447594 0.701780429757353 0.5334418 0.33326674 prediction 0.403560859514705 Functional Gain - BLM ENSG00000197299 CDS Human protein_coding chr15:91292891 chr15:91292892 nonsynonymous SNV 0.000 1 22 hm5C_associated_SNPs_128926 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350196 chr15:91292870-91292892
64251 chr8 59059443 59059443 1 + T C COAD 59059440 + 59059420 59059460 41 CCCCTCAAGGCCATCCCCTGCAGTAGCTCTGCCCCTCCCCT CCCCTCAAGGCCATCCCCTGCAGCAGCTCTGCCCCTCCCCT < 41bp 0.537581980850129 0.739344273102255 0.66133815 0.8706044 prediction 0.403524584504252 Functional Gain - FAM110B ENSG00000169122 CDS Human protein_coding chr8:59059440 chr8:59059443 synonymous SNV . 0 24 hm5C_associated_SNPs_128935 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr8:59059439-59059496
64251 chr1 97270427 97270427 1 + C T UCEC 97270426 + 97270406 97270446 41 GCTGCTGCAGCTGCTGCTGGCCGAGTGGGTATGCCTGGAGT GCTGCTGCAGCTGCTGCTGGCTGAGTGGGTATGCCTGGAGT < 41bp 0.533731002926485 0.735484692141778 0.77956676 0.7301527 prediction 0.403507378430586 Functional Gain - PTBP2 ENSG00000117569 CDS Human protein_coding chr1:97270426 chr1:97270427 stopgain 1.000 1 22 hm5C_associated_SNPs_128938 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:97270406-97270438
64251 chr19 46375726 46375726 1 + C T UCEC 46375725 + 46375705 46375745 41 ATGGACCTCTTCCCTTACTACCGGGAGAATCAGCAGCGCTG ATGGACCTCTTCCCTTACTACTGGGAGAATCAGCAGCGCTG < 41bp 0.619381067718791 0.821122693266542 0.932443 0.68436813 prediction 0.403483251095501 Functional Gain - FOXA3 ENSG00000170608 CDS Human protein_coding chr19:46375725 chr19:46375726 nonsynonymous SNV 0.997 5 22 hm5C_associated_SNPs_128940 0 0 4 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr19:46375687-46375731
64251 chr15 40675155 40675155 1 + C A rs7164132 40675151 + 40675131 40675171 41 GGAAGTTTCTATTTGAAACCCAGGCGGCCGACTTAGCCGGT GGAAGTTTCTATTTGAAACCCAGGAGGCCGACTTAGCCGGT < 41bp 0.736709052166973 0.9384465648982 0.5730754 0.78221184 prediction 0.403475025462455 Functional Gain - KNSTRN ENSG00000128944 CDS Human protein_coding chr15:40675151 chr15:40675155 nonsynonymous SNV 0.041 2 25 hm5C_associated_SNPs_128943 0 0 1 DDX3X POSTAR2 ENCODE chr15:40675149-40675247
64251 chr17 3628883 3628883 1 + C T COAD 3628882 + 3628862 3628902 41 TTATCCGGTGAAGTGTGCAACCGCACAGAAGGCTTTATCGG TTATCCGGTGAAGTGTGCAACTGCACAGAAGGCTTTATCGG < 41bp 0.452306578809037 0.701734445947464 0.073792815 0.20769453 prediction 0.403468891894928 Functional Gain - HASPIN ENSG00000177602 CDS Human protein_coding chr17:3628882 chr17:3628883 nonsynonymous SNV 0.582 0 22 hm5C_associated_SNPs_128945 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:3628860-3628889
64251 chr7 143080384 143080384 1 + C T SKCM 143080383 + 143080363 143080403 41 GAGTGCAGGAGAAGCAGCACCCCGTGCCCCCACCGGCTCAG GAGTGCAGGAGAAGCAGCACCTCGTGCCCCCACCGGCTCAG < 41bp 0.444057838023198 0.701726257333347 0.1576916 0.21252564 prediction 0.403452514666693 Functional Gain - ZYX ENSG00000159840 CDS Human protein_coding chr7:143080383 chr7:143080384 nonsynonymous SNV 0.100 2 22 hm5C_associated_SNPs_128950 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr7:143080377-143080415
64251 chr15 77241568 77241568 1 + T C rs1711018 77241565 + 77241545 77241585 41 CTATCATGATGAGCTTTAATCTCTGAGCCTGTCTCAGTAGA CTATCATGATGAGCTTTAATCTCCGAGCCTGTCTCAGTAGA < 41bp 0.48740061590044 0.701721550364754 0.27889997 0.84566617 prediction 0.403443100729509 Functional Gain - RCN2 ENSG00000117906 UTR3 Human protein_coding chr15:77241565 chr15:77241568 . . 0 24 hm5C_associated_SNPs_128952 0 0 21 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:77241407-77242243
64251 chr3 183884279 183884279 1 + C T STAD 183884278 + 183884258 183884298 41 ATGAGTAATGACGATGCAGTCCGGGTACTGCGGGAGATTGT ATGAGTAATGACGATGCAGTCTGGGTACTGCGGGAGATTGT < 41bp 0.631718174978304 0.833424540190304 0.25375426 0.06240037 prediction 0.403412730424001 Functional Gain - DVL3 ENSG00000161202 CDS Human protein_coding chr3:183884278 chr3:183884279 nonsynonymous SNV 0.991 2 22 hm5C_associated_SNPs_128957 0 0 9 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:183884245-183884291
64251 chr16 68856056 68856056 1 + A G OV 68856053 + 68856033 68856073 41 TCATTGATGCAGACCTTCCTCCCAATACATCTCCCTTCACA TCATTGATGCAGACCTTCCTCCCGATACATCTCCCTTCACA < 41bp 0.461393811825273 0.701701298667221 0.06218043 0.046900958 prediction 0.403402597334442 Functional Gain - CDH1 ENSG00000039068 CDS Human protein_coding chr16:68856053 chr16:68856056 nonsynonymous SNV 0.991 3 24 hm5C_associated_SNPs_128960 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chr16:68856044-68856074
64251 chr19 39963543 39963543 1 + T G COAD 39963541 + 39963521 39963561 41 AACGAACTCATCGGCCAGACCGTGCGCATCTCCCAGGGGCC AACGAACTCATCGGCCAGACCGGGCGCATCTCCCAGGGGCC < 41bp 0.340894821520663 0.701700231815036 0.07124144 0.843129 prediction 0.403400463630072 Functional Gain - SUPT5H ENSG00000196235 CDS Human protein_coding chr19:39963541 chr19:39963543 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_128961 0 0 12 RTCB POSTAR2 GSE38201,GSM936508 chr19:39963518-39963547
64251 chrX 65486415 65486415 1 + T G ESCA 65486413 + 65486393 65486433 41 TTCTGCTCGTTGTTCTGGCTCTTGGTGGAGTGGTTTGGTAC TTCTGCTCGTTGTTCTGGCTCTGGGTGGAGTGGTTTGGTAC < 41bp 0.361257264653787 0.701693787395159 0.16980976 0.90201116 prediction 0.403387574790317 Functional Gain - HEPH ENSG00000089472 CDS Human protein_coding chrX:65486413 chrX:65486415 synonymous SNV . 0 23 hm5C_associated_SNPs_128966 0 0 1 SND1 POSTAR2 ENCODE chrX:65486384-65486427
64251 chrX 102192269 102192269 1 + A G UCEC 102192266 + 102192246 102192286 41 GATGAGCGCCCCGGGCAGCCCCGACCAGGCCTACGACTTCC GATGAGCGCCCCGGGCAGCCCCGGCCAGGCCTACGACTTCC < 41bp 0.615519366598717 0.817208642079005 0.08345249 0.26442224 prediction 0.403378550960575 Functional Gain - RAB40AL ENSG00000102128 CDS Human protein_coding chrX:102192266 chrX:102192269 nonsynonymous SNV 0.040 0 24 hm5C_associated_SNPs_128967 0 0 1 CSTF2T POSTAR2 ENCODE chrX:102192180-102192281
64251 chr4 115585186 115585186 1 + T C SARC 115585184 + 115585164 115585204 41 GGGTAAATGGTGCTAATGAACATGGCTTTGTCTTGGTGTCT GGGTAAATGGTGCTAATGAACACGGCTTTGTCTTGGTGTCT < 41bp 0.417784184368852 0.70168126544136 0.57184803 0.30676925 prediction 0.40336253088272 Functional Gain - UGT8 ENSG00000174607 CDS Human protein_coding chr4:115585184 chr4:115585186 synonymous SNV . 0 23 hm5C_associated_SNPs_128970 0 0 1 TARDBP POSTAR2 DRA001158,DRS012385 chr4:115585159-115585215
64251 chr12 67699019 67699019 1 + T C rs190148163 67699016 + 67698996 67699036 41 CGTTCAGGCTTTGGTTCCTCCAGTGGTGGCTTGTGTTGGAG CGTTCAGGCTTTGGTTCCTCCAGCGGTGGCTTGTGTTGGAG < 41bp 0.481944577731981 0.70167591262331 0.22216997 0.37498254 prediction 0.40335182524662 Functional Gain - CAND1 ENSG00000111530 CDS Human protein_coding chr12:67699016 chr12:67699019 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_128972 0 0 12 FMR1 POSTAR2 GSE39682,GSM977615 chr12:67698934-67699024
64251 chr3 100000628 100000628 1 + T C UCEC 100000626 + 100000606 100000646 41 AAAAGGTGATAGTTTGGCATCATGGGATGGTATTTTAGACT AAAAGGTGATAGTTTGGCATCACGGGATGGTATTTTAGACT < 41bp 0.421664524360357 0.701674773689083 0.815844 0.7944345 prediction 0.403349547378165 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100000626 chr3:100000628 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_128973 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr3:100000605-100000631
64251 chr17 43138785 43138785 1 + T C BLCA 43138782 + 43138762 43138802 41 GGAACGGGAACGGCCATGAGCACTGCAGCGATTGCGAGAAT GGAACGGGAACGGCCATGAGCACCGCAGCGATTGCGAGAAT < 41bp 0.520023208875801 0.721697250996769 0.17831498 0.21816999 prediction 0.403348084241938 Functional Gain - NMT1 ENSG00000136448 CDS Human protein_coding chr17:43138782 chr17:43138785 nonsynonymous SNV 1.000 2 24 hm5C_associated_SNPs_128974 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819213 chr17:43138720-43138800
64251 chr4 41699220 41699220 1 + C G rs10027910 41699219 + 41699199 41699239 41 GTGACACGGCTTTCAAGCTTCCGGATCACTCACCATTTCTT GTGACACGGCTTTCAAGCTTCGGGATCACTCACCATTTCTT < 41bp 0.417710592882983 0.701669407774845 0.5992495 0.76912594 prediction 0.403338815549691 Functional Gain - LIMCH1 ENSG00000064042 UTR3 Human protein_coding chr4:41699219 chr4:41699220 . . 0 22 hm5C_associated_SNPs_128976 0 0 12 METTL3 POSTAR2 GSE46705,GSM1135006 chr4:41699200-41699220
64251 chr13 113760112 113760112 1 + T C rs577393666 113760110 + 113760090 113760130 41 AGAACTTTGCCCGTCAGTCCCATGGGGAATGTCAACAGGCA AGAACTTTGCCCGTCAGTCCCACGGGGAATGTCAACAGGCA < 41bp 0.505414591890635 0.707082907598817 0.72064763 0.77417165 prediction 0.403336631416363 Functional Gain - F7 ENSG00000057593 CDS Human protein_coding chr13:113760110 chr13:113760112 nonsynonymous SNV . 0 23 hm5C_associated_SNPs_128977 0 0 1 NCBP2 POSTAR2 ENCODE chr13:113760110-113760251
64251 chr1 156594457 156594457 1 + T A LIHC 156594455 + 156594435 156594475 41 TCGAGGGCTCCGTGCGCTACCCTGTGCTCACCGCACGCGCC TCGAGGGCTCCGTGCGCTACCCAGTGCTCACCGCACGCGCC < 41bp 0.497731638449052 0.701654474761539 0.09226632 0.49502087 prediction 0.403308949523079 Functional Gain - HAPLN2 ENSG00000132702 CDS Human protein_coding chr1:156594455 chr1:156594457 synonymous SNV . 0 23 hm5C_associated_SNPs_128983 0 0 1 DDX3X POSTAR2 ENCODE chr1:156594385-156594503
64251 chr10 77168012 77168012 1 + T C rs145787694 77168010 + 77167990 77168030 41 TTCCCTCTGGGAGCCGAGATCTTGCGGGGCCAGCGAGGGCG TTCCCTCTGGGAGCCGAGATCTCGCGGGGCCAGCGAGGGCG < 41bp 0.514656902079467 0.716308155464153 0.3205858 0.41792315 prediction 0.403302506769372 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77168010 chr10:77168012 . . 0 23 hm5C_associated_SNPs_128986 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:77167988-77168026
64251 chr7 73811479 73811479 1 + T C rs76865959 73811477 + 73811457 73811497 41 GGCCGGAGAGGGACCTGAGCCGTGAGGTACACAAGGCTGAG GGCCGGAGAGGGACCTGAGCCGCGAGGTACACAAGGCTGAG < 41bp 0.678339542750841 0.879982207558328 0.23123899 0.18755874 prediction 0.403285329614974 Functional Gain - CLIP2 ENSG00000106665 CDS Human protein_coding chr7:73811477 chr7:73811479 synonymous SNV . 0 23 hm5C_associated_SNPs_128990 0 0 2 LIN28B POSTAR2 ENCODE chr7:73811462-73811522
64251 chr1 161185096 161185096 1 + C G rs113220867 161185092 + 161185072 161185112 41 GCTGCACAGTGCTGTCAGAACGGCCGATCTCCAGCCCAAGA GCTGCACAGTGCTGTCAGAACGGCGGATCTCCAGCCCAAGA < 41bp 0.672013427517483 0.873642335756557 0.73901653 0.90753144 prediction 0.403257816478148 Functional Gain - FCER1G ENSG00000158869 UTR5 Human protein_coding chr1:161185092 chr1:161185096 . . 0 25 hm5C_associated_SNPs_128996 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:161185078-161185096
64251 chr7 100731748 100731748 1 + T G rs61730718 100731744 + 100731724 100731764 41 GGATGGTGGGAAAGACGGAGCTGGTACCCAGGGAGGTGAGG GGATGGTGGGAAAGACGGAGCTGGGACCCAGGGAGGTGAGG < 41bp 0.536568194794745 0.738196789436129 0.093669236 0.3025894 prediction 0.403257189282767 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731744 chr7:100731748 synonymous SNV . 0 25 hm5C_associated_SNPs_128997 0 0 5 CSTF2 POSTAR2 GSE40859,GSM1003588 chr7:100731741-100731762
64251 chr5 96322349 96322349 1 + T G STAD 96322347 + 96322327 96322367 41 ATTGTGGGAGAGATGAAGAACCTGAGTCAGGACGTAAATGG ATTGTGGGAGAGATGAAGAACCGGAGTCAGGACGTAAATGG < 41bp 0.356260803983836 0.70161299199576 0.2963739 0.69323224 prediction 0.403225983991519 Functional Gain - LNPEP ENSG00000113441 CDS Human protein_coding chr5:96322347 chr5:96322349 nonsynonymous SNV 0.998 1 23 hm5C_associated_SNPs_129003 0 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:96322331-96322352
64251 chr20 44469901 44469901 1 + C T rs140286266 44469900 + 44469880 44469920 41 GCAGGAGGCAGGCCTTACCCCCACACCACCCCCCAGTCTCA GCAGGAGGCAGGCCTTACCCCTACACCACCCCCCAGTCTCA < 41bp 0.439519194416498 0.70161266859538 0.028977066 0.27633208 prediction 0.403225337190759 Functional Gain - SNX21 ENSG00000124104 CDS Human protein_coding chr20:44469900 chr20:44469901 synonymous SNV . 0 22 hm5C_associated_SNPs_129005 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr20:44469892-44469915
64251 chr3 10183605 10183605 1 + C T rs35460768 10183604 + 10183584 10183624 41 CAGGCGTCGAAGAGTACGGCCCTGAAGAAGACGGCGGGGAG CAGGCGTCGAAGAGTACGGCCTTGAAGAAGACGGCGGGGAG < 41bp 0.48508545574534 0.701611791946954 0.6621092 0.5084122 prediction 0.403223583893908 Functional Gain - VHL ENSG00000134086 CDS Human protein_coding chr3:10183604 chr3:10183605 nonsynonymous SNV 0.015 2 22 hm5C_associated_SNPs_129006 6 0 15 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:10183539-10183640
64251 chr3 150127789 150127789 1 + C T rs139936521 150127788 + 150127768 150127808 41 ACTGCGGAGCGGGACAGCGGCCTGGGCGCCACCGGAGGGTC ACTGCGGAGCGGGACAGCGGCTTGGGCGCCACCGGAGGGTC < 41bp 0.468242212925607 0.70160425117673 0.29324192 0.3720768 prediction 0.40320850235346 Functional Gain - TSC22D2 ENSG00000196428 CDS Human protein_coding chr3:150127788 chr3:150127789 synonymous SNV . 0 22 hm5C_associated_SNPs_129011 0 0 7 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:150127780-150127800
64251 chr19 17895634 17895634 1 + C T HNSC 17895633 + 17895613 17895653 41 CAGTGGAGTACGGCTACCGGCCCGGTGCCACGGCTGTGCCC CAGTGGAGTACGGCTACCGGCTCGGTGCCACGGCTGTGCCC < 41bp 0.641766677730996 0.843370818056945 0.27471358 0.3117747 prediction 0.403208280651896 Functional Gain - FCHO1 ENSG00000130475 CDS Human protein_coding chr19:17895633 chr19:17895634 nonsynonymous SNV 0.040 1 22 hm5C_associated_SNPs_129012 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:17895594-17895636
64251 chr20 62670238 62670238 1 + C G rs547818966 62670235 + 62670215 62670255 41 CGCTCGACGCAGCCCGCGCTCCCCGGAGGGCCCAGGACTTG CGCTCGACGCAGCCCGCGCTCCCGGGAGGGCCCAGGACTTG < 41bp 0.501546668466688 0.703143836856263 0.15501058 0.30964398 prediction 0.403194336779149 Functional Gain - C20orf204 ENSG00000196421 ncRNA_exonic Human protein_coding chr20:62670235 chr20:62670238 . . 0 24 hm5C_associated_SNPs_129018 0 0 3 CSTF2T POSTAR2 ENCODE chr20:62670202-62670242
64251 chr10 5956165 5956165 1 + T C OV 5956163 + 5956143 5956183 41 AGAAAACCATCCAACTTACACATGAACAACAGCTGATTCTG AGAAAACCATCCAACTTACACACGAACAACAGCTGATTCTG < 41bp 0.405579239364264 0.701589326427757 0.20358813 0.17126262 prediction 0.403178652855514 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5956163 chr10:5956165 synonymous SNV . 0 23 hm5C_associated_SNPs_129019 0 0 2 CSTF2T POSTAR2 GSE37401,GSM917677 chr10:5956144-5956180
64251 chr20 61598899 61598899 1 + A G rs3746750 61598896 + 61598876 61598916 41 AGGACCCAGGCGCCAGCAGCCCCAGGACACAGGGGACTCAG AGGACCCAGGCGCCAGCAGCCCCGGGACACAGGGGACTCAG < 41bp 0.562824933610614 0.764411222239389 0.2079176 0.3881572 prediction 0.403172577257549 Functional Gain - SLC17A9 ENSG00000101194 UTR3 Human protein_coding chr20:61598896 chr20:61598899 . . 0 24 hm5C_associated_SNPs_129020 0 0 2 EIF3H POSTAR2 ENCODE chr20:61598849-61598926
64251 chr3 63968684 63968684 1 + C A UCEC 63968680 + 63968660 63968700 41 ACACCAAGAAGCCCTGCACCCGGTCTTTGACATGCAAGGTA ACACCAAGAAGCCCTGCACCCGGTATTTGACATGCAAGGTA < 41bp 0.279486432321888 0.701577962078611 0.14191562 0.25759944 prediction 0.403155924157222 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63968680 chr3:63968684 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_129025 0 0 2 PPIG POSTAR2 ENCODE chr3:63968630-63968703
64251 chr6 26598651 26598651 1 + T C LAML 26598648 + 26598628 26598668 41 GGACAACGCTTTCTTGCGGCCGATGGGGACCCTGCTCGCCC GGACAACGCTTTCTTGCGGCCGACGGGGACCCTGCTCGCCC < 41bp 0.540357447254153 0.741926284976918 0.15272921 0.23188177 prediction 0.40313767544553 Functional Gain - ABT1 ENSG00000146109 CDS Human protein_coding chr6:26598648 chr6:26598651 synonymous SNV . 0 24 hm5C_associated_SNPs_129029 0 0 10 FMR1 POSTAR2 GSE39682,GSM977616 chr6:26598636-26598670
64251 chrX 154261737 154261737 1 + T A LUAD 154261735 + 154261715 154261755 41 GGAATTTGCTAAGAAGCAGCCATGGTGGCGTAAGCTGTTCG GGAATTTGCTAAGAAGCAGCCAAGGTGGCGTAAGCTGTTCG < 41bp 0.488292643221731 0.701568197181613 0.36243832 0.6308013 prediction 0.403136394363225 Functional Gain - FUNDC2 ENSG00000165775 CDS Human protein_coding chrX:154261735 chrX:154261737 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_129030 0 0 1 GEMIN5 POSTAR2 ENCODE chrX:154261681-154261755
64251 chr14 45571826 45571826 1 + C A UCEC 45571825 + 45571805 45571845 41 TGGGAAAATGAGCAGGGAAACCTGAGAGAAGTTACAGCTAT TGGGAAAATGAGCAGGGAAACATGAGAGAAGTTACAGCTAT < 41bp 0.620205673382905 0.821772915046872 0.88505816 0.88508433 prediction 0.403134483327933 Functional Gain - PRPF39 ENSG00000185246 CDS Human protein_coding chr14:45571825 chr14:45571826 nonsynonymous SNV 0.997 1 22 hm5C_associated_SNPs_129032 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:45571757-45571830
64251 chr15 78454635 78454635 1 + T C UCEC 78454632 + 78454612 78454652 41 ACCGAGGGGGCGAGCAAGCGCATTGCTGAGTTTGCCTTTGA ACCGAGGGGGCGAGCAAGCGCATCGCTGAGTTTGCCTTTGA < 41bp 0.481917614958501 0.701562469849233 0.17968127 0.18242273 prediction 0.403124939698466 Functional Gain - IDH3A ENSG00000166411 CDS Human protein_coding chr15:78454632 chr15:78454635 synonymous SNV . 0 24 hm5C_associated_SNPs_129034 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr15:78454615-78454654
64251 chr1 214837042 214837042 1 + C T SKCM 214837041 + 214837021 214837061 41 GAGAGAAGTCCGACTGACAGCCCCAGAGAGGGCCTGAGGGT GAGAGAAGTCCGACTGACAGCTCCAGAGAGGGCCTGAGGGT < 41bp 0.454184214820698 0.701561887831038 0.26904094 0.8649167 prediction 0.403123775662077 Functional Gain - CENPF ENSG00000117724 CDS Human protein_coding chr1:214837041 chr1:214837042 nonsynonymous SNV 0.457 0 22 hm5C_associated_SNPs_129036 0 0 17 FMR1 POSTAR2 GSE39682,GSM977615 chr1:214836993-214837045
64251 chr11 43918805 43918805 1 + C T UCEC 43918804 + 43918784 43918824 41 TTAGTGGAACCGCGACTGCTCCGCAGAGCTGCTGGTATGAG TTAGTGGAACCGCGACTGCTCTGCAGAGCTGCTGGTATGAG < 41bp 0.614551260935836 0.816086415643709 0.13952187 0.22827676 prediction 0.403070309415746 Functional Gain - ALKBH3 ENSG00000166199 CDS Human protein_coding chr11:43918804 chr11:43918805 nonsynonymous SNV . 0 22 hm5C_associated_SNPs_129043 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350198 chr11:43918777-43918812
64251 chr19 41084087 41084087 1 + T A LUAD 41084085 + 41084065 41084105 41 TCCACGGTTCCAGCCTCCTCCATGAAGCCCAGTTCTATGGG TCCACGGTTCCAGCCTCCTCCAAGAAGCCCAGTTCTATGGG < 41bp 0.541904160336873 0.743437707879476 0.1919187 0.5317088 prediction 0.403067095085207 Functional Gain - SHKBP1 ENSG00000160410 CDS Human protein_coding chr19:41084085 chr19:41084087 nonsynonymous SNV 0.967 3 23 hm5C_associated_SNPs_129044 0 0 1 PRPF8 POSTAR2 ENCODE chr19:41084085-41084153
64251 chr17 53046170 53046170 1 + A G rs556245888 53046167 + 53046147 53046187 41 GGCTACGGAGGCCGGGTTGCCAGATTACGGGTAAGTTTGCG GGCTACGGAGGCCGGGTTGCCAGGTTACGGGTAAGTTTGCG < 41bp 0.582919360579374 0.784449385609782 0.9084265 0.90841806 prediction 0.403060050060816 Functional Gain - STXBP4 ENSG00000166263 UTR5 Human protein_coding chr17:53046167 chr17:53046170 . . 0 24 hm5C_associated_SNPs_129045 0 0 4 DDX3X POSTAR2 ENCODE chr17:53046126-53046177
64251 chr10 131265559 131265559 1 + T C COAD 131265557 + 131265537 131265577 41 GCGGTGCGCACCGTTTGCGACTTGGTGAGTGTCTGGGTCGC GCGGTGCGCACCGTTTGCGACTCGGTGAGTGTCTGGGTCGC < 41bp 0.602244279703345 0.803771915298234 0.14781272 0.1787777 prediction 0.403055271189777 Functional Gain - MGMT ENSG00000170430 CDS Human protein_coding chr10:131265557 chr10:131265559 nonsynonymous SNV 0.878 1 23 hm5C_associated_SNPs_129046 0 0 2 DDX3X POSTAR2 ENCODE chr10:131265509-131265563
64251 chr3 107492007 107492007 1 + A G COAD 107492004 + 107491984 107492024 41 TTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCG TTGCAAAAAGAGGCAGTCTTCGGGATCTGACATTGAGAGCG < 41bp 0.593912925827857 0.795440431317962 0.90728474 0.9261143 prediction 0.40305501098021 Functional Gain - BBX ENSG00000114439 CDS Human protein_coding chr3:107492004 chr3:107492007 nonsynonymous SNV 0.992 4 24 hm5C_associated_SNPs_129047 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:107491991-107492026
64251 chr17 33326346 33326346 1 + C A UCEC 33326342 + 33326322 33326362 41 CCAGGCGGCATGATGTCAATCTTCCTCATGGGCTGCTACGA CCAGGCGGCATGATGTCAATCTTCATCATGGGCTGCTACGA < 41bp 0.266221961698414 0.701522037533921 0.019079596 0.014124721 prediction 0.403044075067841 Functional Gain - LIG3 ENSG00000005156 CDS Human protein_coding chr17:33326342 chr17:33326346 nonsynonymous SNV 1.000 4 25 hm5C_associated_SNPs_129049 0 0 7 FMR1 POSTAR2 GSE39682,GSM977615 chr17:33326336-33326358
64251 chr4 110608723 110608723 1 + T A COAD 110608719 + 110608699 110608739 41 ATTCTCTCTGTTTGCAAATGCAAGTAGAAGAACTCAATGAA ATTCTCTCTGTTTGCAAATGCAAGAAGAAGAACTCAATGAA < 41bp 0.403385008118269 0.70151736981713 0.4116204 0.82137835 prediction 0.40303473963426 Functional Gain - MCUB ENSG00000005059 CDS Human protein_coding chr4:110608719 chr4:110608723 nonsynonymous SNV 0.450 1 25 hm5C_associated_SNPs_129050 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:110608673-110608733
64251 chr2 120003247 120003247 1 + C T SKCM 120003246 + 120003226 120003266 41 TTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGC TTCAAAGTGGTGGTGGGGAGCTGCAACCCCAAACGCACAGC < 41bp 0.6427391890824 0.844255751878446 0.5684518 0.59133106 prediction 0.403033125592092 Functional Gain - STEAP3 ENSG00000115107 CDS Human protein_coding chr2:120003246 chr2:120003247 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129051 0 0 1 DDX3X POSTAR2 ENCODE chr2:120003064-120003273
64251 chr16 81739204 81739204 1 + T G HNSC 81739202 + 81739182 81739222 41 ACAGACGCTGGCCTGCTGGCCCTGAGCTGTGAGTGCCTCCG ACAGACGCTGGCCTGCTGGCCCGGAGCTGTGAGTGCCTCCG < 41bp 0.343337973894199 0.701516394812095 0.22126245 0.6382662 prediction 0.40303278962419 Functional Gain - CMIP ENSG00000153815 CDS Human protein_coding chr16:81739202 chr16:81739204 nonsynonymous SNV 0.998 4 23 hm5C_associated_SNPs_129052 0 0 3 FXR2 POSTAR2 ENCODE chr16:81739154-81739209
64251 chr7 129349024 129349024 1 + C T SKCM 129349023 + 129349003 129349043 41 TCTGGTGGCCTGAAGATATCCCCTGGGCAAATGTCCGGAGT TCTGGTGGCCTGAAGATATCCTCTGGGCAAATGTCCGGAGT < 41bp 0.425925811508885 0.701506820436927 0.031348944 0.0329583 prediction 0.403013640873853 Functional Gain - NRF1 ENSG00000106459 CDS Human protein_coding chr7:129349023 chr7:129349024 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_129055 0 0 2 DDX24 POSTAR2 ENCODE chr7:129348983-129349063
64251 chr2 26505777 26505777 1 + C T PRAD 26505776 + 26505756 26505796 41 CTCTGGCCATGGGTTATAAGCCGAAGGCATATTTGAGGTAA CTCTGGCCATGGGTTATAAGCTGAAGGCATATTTGAGGTAA < 41bp 0.635465154298035 0.83696829165282 0.59411997 0.36192852 prediction 0.403006274709569 Functional Gain - HADHB ENSG00000138029 CDS Human protein_coding chr2:26505776 chr2:26505777 nonsynonymous SNV 0.987 5 22 hm5C_associated_SNPs_129057 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr2:26505755-26505779
64251 chr2 184024289 184024289 1 + T C UCEC 184024286 + 184024266 184024306 41 CTTTACACCACCAATCAAAACTCTAGGTACACCAACACAAC CTTTACACCACCAATCAAAACTCCAGGTACACCAACACAAC < 41bp 0.614231474560314 0.815732624744299 0.5859774 0.910244 prediction 0.40300230036797 Functional Gain - NUP35 ENSG00000163002 CDS Human protein_coding chr2:184024286 chr2:184024289 nonsynonymous SNV 0.969 0 24 hm5C_associated_SNPs_129058 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:184024230-184024291
64251 chr22 41605776 41605776 1 - G A rs143455680 41605777 - 41605757 41605797 41 CCCACACTGCTGTTATAACTCCGGAAACTATCATAGCCACC CCCACACTGCTGTTATAACTCTGGAAACTATCATAGCCACC < 41bp 0.600939847772702 0.802438964551506 0.24143943 0.1299555 prediction 0.402998233557607 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41605777 chr22:41605776 nonsynonymous SNV 0.993 1 22 hm5C_associated_SNPs_129059 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:41605755-41605788
64251 chrX 118603924 118603924 1 + C T STAD 118603923 + 118603903 118603943 41 GTGTACCCTCTTGATTTTGCCCGTACCCGTCTAGCAGCTGA GTGTACCCTCTTGATTTTGCCTGTACCCGTCTAGCAGCTGA < 41bp 0.447365513251696 0.701487433362463 0.10639754 0.24989718 prediction 0.402974866724926 Functional Gain - SLC25A5 ENSG00000005022 CDS Human protein_coding chrX:118603923 chrX:118603924 nonsynonymous SNV 1.000 3 22 hm5C_associated_SNPs_129066 0 0 41 ATXN2 POSTAR2 DRA001158,DRS012391 chrX:118603801-118604007
64251 chr11 43965005 43965005 1 + C A ACC 43965004 + 43964984 43965024 41 TGCGCCCCTCGCCGCGCTCGCCCTGGCCCGGGAGCGCCGGG TGCGCCCCTCGCCGCGCTCGCACTGGCCCGGGAGCGCCGGG < 41bp 0.628982354876778 0.830469397824681 0.37154558 0.76064813 prediction 0.402974085895806 Functional Gain - C11orf96 ENSG00000187479 CDS Human protein_coding chr11:43965004 chr11:43965005 synonymous SNV . 0 22 hm5C_associated_SNPs_129067 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr11:43965005-43965006
64251 chr2 220047044 220047044 1 + T C KIRP 220047042 + 220047022 220047062 41 CCCGAGACAGTGAGTGGTGGCCTCACTGCTCTGCCCGGCAC CCCGAGACAGTGAGTGGTGGCCCCACTGCTCTGCCCGGCAC < 41bp 0.414239615617249 0.701483271595903 0.03096795 0.025476456 prediction 0.402966543191806 Functional Gain - RETREG2 ENSG00000144567 CDS Human protein_coding chr2:220047042 chr2:220047044 nonsynonymous SNV 0.636 1 23 hm5C_associated_SNPs_129069 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:220047040-220047060
64251 chr7 76178759 76178759 1 + C G rs529574370 76178755 + 76178735 76178775 41 CTGCGGGGCTAGACGCTGACCGCCCGGGCCAGCACCTAGGC CTGCGGGGCTAGACGCTGACCGCCGGGGCCAGCACCTAGGC < 41bp 0.675564708650838 0.877030388828054 0.378092 0.5508709 prediction 0.402931360354432 Functional Gain - LOC100133091 ENSG00000205485 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr7:76178755 chr7:76178759 . . 0 25 hm5C_associated_SNPs_129078 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350198 chr7:76178730-76178763
64251 chr3 37081682 37081682 1 + C A GBM 37081681 + 37081661 37081701 41 ATTTTTTGTTTTGCAGTTCTCCGGGAGATGTTGCATAACCA ATTTTTTGTTTTGCAGTTCTCAGGGAGATGTTGCATAACCA < 41bp 0.544511389152489 0.745967539954259 0.89965224 0.91174453 prediction 0.402912301603539 Functional Gain - MLH1 ENSG00000076242 CDS Human protein_coding chr3:37081681 chr3:37081682 synonymous SNV . 0 22 hm5C_associated_SNPs_129084 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr3:37081650-37081684
64251 chr9 127110095 127110095 1 + C A SKCM 127110094 + 127110074 127110114 41 ACTCCCCGGGGAGCACTACTCCGAGAAGGTGAGTTTGCAGG ACTCCCCGGGGAGCACTACTCAGAGAAGGTGAGTTTGCAGG < 41bp 0.658737296900316 0.860182609845198 0.81643164 0.93001515 prediction 0.402890625889764 Functional Gain - NEK6 ENSG00000119408 CDS Human protein_coding chr9:127110094 chr9:127110095 synonymous SNV . 0 22 hm5C_associated_SNPs_129087 0 0 1 RPS3 POSTAR2 ENCODE chr9:127110061-127110102
64251 chr14 35452160 35452160 1 + T C rs12891283 35452157 + 35452137 35452177 41 GGAAGCGGAAGTAGATTCTCCTATAGAAAGGCTGGACTACG GGAAGCGGAAGTAGATTCTCCTACAGAAAGGCTGGACTACG < 41bp 0.51602407395406 0.717466147308692 0.47378892 0.8486556 prediction 0.402884146709265 Functional Gain - SRP54 ENSG00000100883 UTR5 Human protein_coding chr14:35452157 chr14:35452160 . . 0 24 hm5C_associated_SNPs_129090 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819212 chr14:35452160-35452161
64251 chr7 6063241 6063241 1 - A G STAD 6063244 - 6063224 6063264 41 CACCTCTGCACATTGGCTGGCACTGTCACACTGCAGCCTCC CACCTCTGCACATTGGCTGGCACCGTCACACTGCAGCCTCC < 41bp 0.509795978620741 0.711229699961196 0.10232374 0.13184136 prediction 0.40286744268091 Functional Gain - AIMP2 ENSG00000106305 CDS Human protein_coding chr7:6063244 chr7:6063241 synonymous SNV . 0 24 hm5C_associated_SNPs_129092 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:6063232-6063256
64251 chr10 114910854 114910854 1 + C T COAD 114910853 + 114910833 114910873 41 ACAGTCAAACAGGAATCGTCCCAGAGTGATGTCGGCTCACT ACAGTCAAACAGGAATCGTCCTAGAGTGATGTCGGCTCACT < 41bp 0.592121465843253 0.793553075485463 0.24081594 0.18079555 prediction 0.40286321928442 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114910853 chr10:114910854 stopgain 1.000 1 22 hm5C_associated_SNPs_129093 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr10:114910799-114910868
64251 chr8 48878888 48878888 1 + C G UCEC 48878887 + 48878867 48878907 41 ACCGCGGCCGCATTGCAGAGCCCAGTGTGTGCGGGCGCTGC ACCGCGGCCGCATTGCAGAGCGCAGTGTGTGCGGGCGCTGC < 41bp 0.36880468715449 0.701428426993786 0.33363765 0.4277224 prediction 0.402856853987573 Functional Gain - MCM4 ENSG00000104738 CDS Human protein_coding chr8:48878887 chr8:48878888 nonsynonymous SNV 0.091 4 22 hm5C_associated_SNPs_129097 0 0 10 FXR2 POSTAR2 GSE39682,GSM977620 chr8:48878866-48878889
64251 chr18 46284587 46284587 1 + T C rs1038308 46284585 + 46284565 46284605 41 GGGACACCGGGCACAGCAGCCTTGAGGCCCCCCGCAGCCCT GGGACACCGGGCACAGCAGCCTCGAGGCCCCCCGCAGCCCT < 41bp 0.66408583912024 0.865511580737497 0.20435748 0.35518846 prediction 0.402851483234515 Functional Gain - CTIF ENSG00000134030 CDS Human protein_coding chr18:46284585 chr18:46284587 synonymous SNV . 0 23 hm5C_associated_SNPs_129098 0 0 1 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr18:46284524-46284620
64251 chr19 50169097 50169097 1 - G A SKCM 50169098 - 50169078 50169118 41 GGGCATAGGGGCGGGAACAGCCCAGCGGGCCGTCCCATCGG GGGCATAGGGGCGGGAACAGCTCAGCGGGCCGTCCCATCGG < 41bp 0.531775096571722 0.733196661328221 0.50984836 0.6640075 prediction 0.402843129512997 Functional Gain - BCL2L12 ENSG00000126453 CDS Human protein_coding chr19:50169098 chr19:50169097 nonsynonymous SNV 0.002 1 22 hm5C_associated_SNPs_129100 0 0 3 DDX3X POSTAR2 ENCODE chr19:50168982-50169110
64251 chr11 61205522 61205522 1 + A G LUSC 61205519 + 61205499 61205539 41 AGCACATGACAGAAAAGCAGCTGAACCTCTATGACCGCCTG AGCACATGACAGAAAAGCAGCTGGACCTCTATGACCGCCTG < 41bp 0.591054378678307 0.792475091721939 0.7543997 0.26684362 prediction 0.402841426087264 Functional Gain - SDHAF2 ENSG00000167985;ENSG00000256591 CDS Human other chr11:61205519 chr11:61205522 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_129101 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:61205503-61205567
64251 chr19 19606981 19606981 1 + C T UCEC 19606980 + 19606960 19607000 41 ATCATCCAGCAGGGCCTCATCCGCGTCGCCAATGTTCCCAA ATCATCCAGCAGGGCCTCATCTGCGTCGCCAATGTTCCCAA < 41bp 0.648736294982037 0.850151318310488 0.48856023 0.25968093 prediction 0.402830046656902 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19606980 chr19:19606981 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_129105 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:19606927-19607004
64251 chr8 22265945 22265945 1 + C A STAD 22265944 + 22265924 22265964 41 GCTGGATTCCCGGGCCTGCACCTCGGAGAACCAGGAAAACG GCTGGATTCCCGGGCCTGCACATCGGAGAACCAGGAAAACG < 41bp 0.439675572417572 0.701408084973471 0.48908868 0.5858865 prediction 0.402816169946941 Functional Gain - SLC39A14 ENSG00000104635 CDS Human protein_coding chr8:22265944 chr8:22265945 synonymous SNV . 0 22 hm5C_associated_SNPs_129107 0 0 4 RPS3 POSTAR2 ENCODE chr8:22265913-22265971
64251 chr4 30724750 30724750 1 + A G STAD 30724747 + 30724727 30724767 41 CGCAGACAGCGGTAAGAACGCCGAGATCGCCTACTCGCTGG CGCAGACAGCGGTAAGAACGCCGGGATCGCCTACTCGCTGG < 41bp 0.460373667746557 0.701406372277949 0.6987897 0.88370204 prediction 0.402812744555898 Functional Gain - PCDH7 ENSG00000169851 CDS Human protein_coding chr4:30724747 chr4:30724750 nonsynonymous SNV 0.955 3 24 hm5C_associated_SNPs_129108 0 0 4 FUS POSTAR2 GSE40653,GSM998875 chr4:30724740-30724760
64251 chr5 176873879 176873879 1 + C A rs111752154 176873878 + 176873858 176873898 41 CCGGGCCGCCGCCGCCTCCCCCCGCAGGCCCGGGGCTCTGT CCGGGCCGCCGCCGCCTCCCCACGCAGGCCCGGGGCTCTGT < 41bp 0.588904734448741 0.790308866857404 0.2697557 0.38460177 prediction 0.402808264817327 Functional Gain - PRR7-AS1 ENSG00000246334 ncRNA_intronic Human antisense chr5:176873878 chr5:176873879 . . 0 22 hm5C_associated_SNPs_129109 0 0 1 DDX3X POSTAR2 ENCODE chr5:176873874-176873947
64251 chr7 150066008 150066008 1 + T C rs3735166 150066006 + 150065986 150066026 41 GGCTCCATGGACGGGCGCCGCGTCCCTGCACAGCCCGCCGC GGCTCCATGGACGGGCGCCGCGCCCCTGCACAGCCCGCCGC < 41bp 0.520472763851245 0.721872678058347 0.059596986 0.03483388 prediction 0.402799828414205 Functional Gain - REPIN1 ENSG00000214022 CDS Human protein_coding chr7:150066006 chr7:150066008 nonsynonymous SNV 0.000 1 23 hm5C_associated_SNPs_129110 0 0 11 FMR1 POSTAR2 GSE39682,GSM977616 chr7:150066002-150066016
64251 chr15 81293928 81293928 1 + C G rs28387047 81293924 + 81293904 81293944 41 CCACACCCTCTGCCCCGCTGCCGCCGGCGCCGCTTCCCAAG CCACACCCTCTGCCCCGCTGCCGCGGGCGCCGCTTCCCAAG < 41bp 0.435672078993291 0.701396470499942 0.27771744 0.5859666 prediction 0.402792940999885 Functional Gain - TLNRD1 ENSG00000140406 UTR5 Human protein_coding chr15:81293924 chr15:81293928 . . 0 25 hm5C_associated_SNPs_129111 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:81293927-81293957
64251 chr7 8008801 8008801 1 + C G rs568637963 8008797 + 8008777 8008817 41 TCGCAGCCTTCCCCTCCCCCCTCGCCGAGGCGGCGGGGGTG TCGCAGCCTTCCCCTCCCCCCTCGGCGAGGCGGCGGGGGTG < 41bp 0.606992935661934 0.808387976035538 0.40509483 0.2534559 prediction 0.402790080747207 Functional Gain - GLCCI1 ENSG00000233108 ncRNA_intronic Human antisense chr7:8008797 chr7:8008801 . . 0 25 hm5C_associated_SNPs_129113 0 0 3 CPSF2 POSTAR2 GSE37401,GSM917670 chr7:8008773-8008803
64251 chr19 48284391 48284391 1 + C T UCEC 48284390 + 48284370 48284410 41 CGAGGGAACTCCCCAGGCCACCGGGTTCTTTGAAGTGATGG CGAGGGAACTCCCCAGGCCACTGGGTTCTTTGAAGTGATGG < 41bp 0.620471334218602 0.82185515780568 0.69861996 0.30864978 prediction 0.402767647174157 Functional Gain - SELENOW ENSG00000178980 CDS Human protein_coding chr19:48284390 chr19:48284391 synonymous SNV . 0 22 hm5C_associated_SNPs_129122 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr19:48284391-48284392
64251 chr2 9580739 9580739 1 + C T STAD 9580738 + 9580718 9580758 41 AATGCCATGAATGACAAAATCCGCAAACAGATCAACATCAA AATGCCATGAATGACAAAATCTGCAAACAGATCAACATCAA < 41bp 0.642259518147709 0.843640646291656 0.029595047 0.07416731 prediction 0.402762256287896 Functional Gain - CPSF3 ENSG00000119203 CDS Human protein_coding chr2:9580738 chr2:9580739 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_129123 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:9580712-9580749
64251 chr16 28846967 28846967 1 + C T UCEC 28846966 + 28846946 28846986 41 GCACGCCGCCCTCTCTGCCACCGGGACCTTCTGCCCAGTCC GCACGCCGCCCTCTCTGCCACTGGGACCTTCTGCCCAGTCC < 41bp 0.621584980964119 0.822964899089552 0.65013385 0.45444402 prediction 0.402759836250866 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28846966 chr16:28846967 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129124 0 0 4 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:28846938-28846972
64251 chr4 1388441 1388441 1 + A G BRCA 1388438 + 1388418 1388458 41 GCGGAGTGCCCGCCTGCTCACACATGCCCATGTGGAGTGCC GCGGAGTGCCCGCCTGCTCACACGTGCCCATGTGGAGTGCC < 41bp 0.628790487257758 0.830167441418674 0.050212473 0.09465897 prediction 0.402753908321833 Functional Gain - CRIPAK ENSG00000179979 CDS Human protein_coding chr4:1388438 chr4:1388441 nonsynonymous SNV 0.003 0 24 hm5C_associated_SNPs_129126 0 0 2 DDX6 POSTAR2 ENCODE chr4:1388398-1388450
64251 chrX 48336857 48336857 1 + C T UCEC 48336856 + 48336836 48336876 41 GGCGTGACACGGGCAGTTGACCTGTGTGCAGCCCCAGGCAG GGCGTGACACGGGCAGTTGACTTGTGTGCAGCCCCAGGCAG < 41bp 0.615409594789909 0.816781140617056 0.298357 0.4210509 prediction 0.402743091654293 Functional Gain - FTSJ1 ENSG00000068438 CDS Human protein_coding chrX:48336856 chrX:48336857 synonymous SNV . 0 22 hm5C_associated_SNPs_129130 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chrX:48336841-48336861
64251 chr16 74425696 74425696 1 + C T PRAD 74425695 + 74425675 74425715 41 TCCCTTAGCTACTCAGGAGGCCGAGGCGGAAAAACCACCCA TCCCTTAGCTACTCAGGAGGCTGAGGCGGAAAAACCACCCA < 41bp 0.525595701534706 0.72696377586326 0.9081243 0.90725195 prediction 0.402736148657108 Functional Gain - NPIPB15 ENSG00000196436 CDS Human protein_coding chr16:74425695 chr16:74425696 synonymous SNV . 0 22 hm5C_associated_SNPs_129133 0 0 1 LSM11 POSTAR2 ENCODE chr16:74425678-74425728
64251 chrX 101971018 101971018 1 + T C ACC 101971015 + 101970995 101971035 41 GAGGGTGGAGCTTCAGCAATCTGTGAATCTGAGCCAGGAAC GAGGGTGGAGCTTCAGCAATCTGCGAATCTGAGCCAGGAAC < 41bp 0.56510418886771 0.76646469442278 0.416436 0.44672444 prediction 0.402721011110141 Functional Gain - ARMCX5-GPRASP2;GPRASP2 ENSG00000158301 CDS Human protein_coding chrX:101971015 chrX:101971018 synonymous SNV . 0 24 hm5C_associated_SNPs_129135 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chrX:101970980-101971019
64251 chr19 10395489 10395489 1 + C G rs112301533 10395488 + 10395468 10395508 41 GACTGGACGAGAGGGATTGTCCGGGAAACTGGACGTGGCCA GACTGGACGAGAGGGATTGTCGGGGAAACTGGACGTGGCCA < 41bp 0.701501968901664 0.902860509804536 0.896294 0.9430833 prediction 0.402717081805744 Functional Gain - ICAM1 ENSG00000090339 CDS Human protein_coding chr19:10395488 chr19:10395489 nonsynonymous SNV 0.024 3 22 hm5C_associated_SNPs_129136 0 0 5 NOL12 POSTAR2 ENCODE chr19:10395477-10395498
64251 chr2 30480360 30480360 1 + T C THYM 30480357 + 30480337 30480377 41 ACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAG ACTGAAGGACCGTCTGCCCTCCACAGTGGTGGAACCCACAG < 41bp 0.554846244078086 0.756200087835382 0.27761698 0.32187408 prediction 0.402707687514591 Functional Gain - LBH ENSG00000213626 CDS Human protein_coding chr2:30480357 chr2:30480360 nonsynonymous SNV 0.996 4 24 hm5C_associated_SNPs_129138 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:30480344-30480377
64251 chrX 46713420 46713420 1 + C A THCA 46713416 + 46713396 46713436 41 GGACTATGTTCCTATACCTACTACCGAAGAGCTCAAAGCTG GGACTATGTTCCTATACCTACTACAGAAGAGCTCAAAGCTG < 41bp 0.274776236503971 0.701350145055858 0.01768744 0.28261143 prediction 0.402700290111715 Functional Gain - RP2 ENSG00000102218 CDS Human protein_coding chrX:46713416 chrX:46713420 synonymous SNV . 0 25 hm5C_associated_SNPs_129141 0 0 1 CPSF2 POSTAR2 GSE37401,GSM917670 chrX:46713403-46713421
64251 chr11 65729273 65729273 1 + C G BLCA 65729270 + 65729250 65729290 41 CTATGGGGTCGTCCAAGAAGCATCGCGGAGAGAAGGAGGCG CTATGGGGTCGTCCAAGAAGCATGGCGGAGAGAAGGAGGCG < 41bp 0.5006110661422 0.701959889671952 0.29075503 0.4588316 prediction 0.402697647059505 Functional Gain - SART1 ENSG00000175467 CDS Human protein_coding chr11:65729270 chr11:65729273 nonsynonymous SNV 0.961 4 24 hm5C_associated_SNPs_129142 0 0 7 DDX3X POSTAR2 ENCODE chr11:65729251-65729330
64251 chr1 90399924 90399924 1 + C A OV 90399920 + 90399900 90399940 41 CAGTATGACCAGCTATATTCCAAGCGTTTTGGTGTGTTCTT CAGTATGACCAGCTATATTCCAAGAGTTTTGGTGTGTTCTT < 41bp 0.311020017061451 0.701345078088264 0.7076836 0.85841876 prediction 0.402690156176528 Functional Gain - LRRC8D ENSG00000171492 CDS Human protein_coding chr1:90399920 chr1:90399924 nonsynonymous SNV 0.998 4 25 hm5C_associated_SNPs_129146 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:90399891-90399936
64251 chr9 130095381 130095381 1 + T C UCEC 130095379 + 130095359 130095399 41 TAAAGGGCTGGACGGGCTACCGTGGCGGTCTGGATACCAAA TAAAGGGCTGGACGGGCTACCGCGGCGGTCTGGATACCAAA < 41bp 0.418293452134876 0.701340778321177 0.6058865 0.9012078 prediction 0.402681556642355 Functional Gain - GARNL3 ENSG00000136895 CDS Human protein_coding chr9:130095379 chr9:130095381 synonymous SNV . 0 23 hm5C_associated_SNPs_129149 0 0 1 PPIG POSTAR2 ENCODE chr9:130095340-130095398
64251 chr2 28117490 28117490 1 + C T LAML 28117489 + 28117469 28117509 41 CCTTTCATATCTAGCGTGGTCCGGAATGGAAAAGTGGGACT CCTTTCATATCTAGCGTGGTCTGGAATGGAAAAGTGGGACT < 41bp 0.60643721372749 0.807769698878891 0.025891244 0.026319772 prediction 0.402664970302802 Functional Gain - BABAM2 ENSG00000158019 CDS Human protein_coding chr2:28117489 chr2:28117490 nonsynonymous SNV 0.994 4 22 hm5C_associated_SNPs_129151 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:28117458-28117524
64251 chr11 720164 720164 1 + C T LUAD 720163 + 720143 720183 41 TCCAAGGAGAAGATCTGGACCCAGGAGATGCTGCTGCAGGT TCCAAGGAGAAGATCTGGACCTAGGAGATGCTGCTGCAGGT < 41bp 0.457373273262106 0.701332257446375 0.41346088 0.087265074 prediction 0.40266451489275 Functional Gain - EPS8L2 ENSG00000177106 CDS Human protein_coding chr11:720163 chr11:720164 stopgain 0.985 1 22 hm5C_associated_SNPs_129152 0 0 4 GRWD1 POSTAR2 ENCODE chr11:720144-720164
64251 chr1 163310200 163310200 1 + A G LUAD 163310197 + 163310177 163310217 41 CCAAAAGAAGTCAAATATTTCAGAGAAAACCAAGCGTTTGG CCAAAAGAAGTCAAATATTTCAGGGAAAACCAAGCGTTTGG < 41bp 0.589923405865314 0.791254614687544 0.46559852 0.8111998 prediction 0.402662417644459 Functional Gain - NUF2 ENSG00000143228 CDS Human protein_coding chr1:163310197 chr1:163310200 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_129154 0 0 2 BUD13 POSTAR2 ENCODE chr1:163310194-163310211
64251 chr13 22275929 22275929 1 + C G rs147999718 22275925 + 22275905 22275945 41 GAGCGAGAGCAAAAGGACTGCGGCCTGATGCATGCTGGAAA GAGCGAGAGCAAAAGGACTGCGGCGTGATGCATGCTGGAAA < 41bp 0.411346120195759 0.701321995366698 0.6717846 0.83990383 prediction 0.402643990733396 Functional Gain - FGF9 ENSG00000102678 UTR3 Human protein_coding chr13:22275925 chr13:22275929 . . 0 25 hm5C_associated_SNPs_129158 1 0 4 TARDBP POSTAR2 DRA001158,DRS012386 chr13:22275825-22275948
64251 chr6 71567719 71567719 1 + T G UCEC 71567715 + 71567695 71567735 41 GATGGGCGTGCCTGTGCCTGCAGCTCCTGGCCTTATAGGAA GATGGGCGTGCCTGTGCCTGCAGCGCCTGGCCTTATAGGAA < 41bp 0.491901950137095 0.701317870738325 0.25288367 0.25530398 prediction 0.40263574147665 Functional Gain - SMAP1 ENSG00000112305 CDS Human protein_coding chr6:71567715 chr6:71567719 synonymous SNV . 0 25 hm5C_associated_SNPs_129161 0 0 3 IGF2BP1 POSTAR2 ENCODE chr6:71567648-71567723
64251 chr19 50910610 50910610 1 + C T rs2230248 50910609 + 50910589 50910629 41 GCACGAGGGGCTGCTGATGCCCGTGGTGAAGTCAGAGGGCG GCACGAGGGGCTGCTGATGCCTGTGGTGAAGTCAGAGGGCG < 41bp 0.456788227404036 0.701297001100589 0.31637165 0.3941056 prediction 0.402594002201179 Functional Gain - POLD1 ENSG00000062822 CDS Human protein_coding chr19:50910609 chr19:50910610 synonymous SNV . 0 22 hm5C_associated_SNPs_129173 2 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:50910607-50910634
64251 chr11 2418102 2418102 1 + C T rs188175983 2418101 + 2418081 2418121 41 CAGCTCCGTGTACTGAGGCCCCGCAGCTCTGGCCACAGGGA CAGCTCCGTGTACTGAGGCCCTGCAGCTCTGGCCACAGGGA < 41bp 0.586744145815013 0.788036992699788 0.015526354 0.048568815 prediction 0.402585693769551 Functional Gain - CD81 ENSG00000110651 UTR3 Human protein_coding chr11:2418101 chr11:2418102 . . 0 22 hm5C_associated_SNPs_129176 0 0 15 PTBP1 POSTAR2 GSE42701,GSM1048186 chr11:2418100-2418120
64251 chrX 40440272 40440272 1 + C A rs377597654 40440271 + 40440251 40440291 41 CGGCTGTCGCCCGTGTCCCGCCGGCCCGTTCCGTGTCGCCC CGGCTGTCGCCCGTGTCCCGCAGGCCCGTTCCGTGTCGCCC < 41bp 0.603200490949665 0.8044874051511 0.8126503 0.8884505 prediction 0.402573828402871 Functional Gain - ATP6AP2 ENSG00000182220 CDS Human protein_coding chrX:40440271 chrX:40440272 synonymous SNV . 0 22 hm5C_associated_SNPs_129179 1 0 16 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:40440200-40440320
64251 chrX 64959919 64959919 1 + C T rs187113694 64959918 + 64959898 64959938 41 ACCAAACCTAGCCCCTTAGCCCCCACCCACTTCCCTGGGCA ACCAAACCTAGCCCCTTAGCCTCCACCCACTTCCCTGGGCA < 41bp 0.438744427632895 0.701284924919673 0.15403825 0.8955724 prediction 0.402569849839346 Functional Gain - MSN ENSG00000147065 UTR3 Human protein_coding chrX:64959918 chrX:64959919 . . 0 22 hm5C_associated_SNPs_129180 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chrX:64959884-64959942
64251 chr12 98987856 98987856 1 + C G LUSC 98987852 + 98987832 98987872 41 CTCGGGGACCTCCGCAGCAGCTCCCCAGGGCCCACGGGCCA CTCGGGGACCTCCGCAGCAGCTCCGCAGGGCCCACGGGCCA < 41bp 0.685365425528911 0.886649130905932 0.0626311 0.11601928 prediction 0.402567410754042 Functional Gain - SLC25A3 ENSG00000075415 CDS Human protein_coding chr12:98987852 chr12:98987856 nonsynonymous SNV 0.000 0 25 hm5C_associated_SNPs_129181 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:98987740-98987860
64251 chr11 118272388 118272388 1 + A G KIRP 118272385 + 118272365 118272405 41 TCTCCATTCCAGAACCATGGCCCAATTTGTCCGTAACCTTG TCTCCATTCCAGAACCATGGCCCGATTTGTCCGTAACCTTG < 41bp 0.592014942897384 0.793292381578939 0.089107275 0.1058225 prediction 0.40255487736311 Functional Gain - ATP5L ENSG00000167283 CDS Human protein_coding chr11:118272385 chr11:118272388 nonsynonymous SNV 0.992 1 24 hm5C_associated_SNPs_129185 0 0 21 TARDBP POSTAR2 DRA001158,DRS012387 chr11:118272334-118272425
64251 chr16 24229633 24229633 1 + C G rs77825011 24229632 + 24229612 24229652 41 TTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG TTCGAGCTTTGTTGTGAACACGGGAAGTAACATGCCGAGCG < 41bp 0.639417244682993 0.840689279999132 0.8864791 0.89998376 prediction 0.402544070632278 Functional Gain - PRKCB ENSG00000166501 UTR3 Human protein_coding chr16:24229632 chr16:24229633 . . 0 22 hm5C_associated_SNPs_129188 0 0 2 UPF1 POSTAR2 ENCODE chr16:24229602-24229637
64251 chr1 228346653 228346653 1 + C G STAD 228346649 + 228346629 228346669 41 CGCGTCCCGGACGGGCAGTGCTACCTCTGCGGGCACTGTCG CGCGTCCCGGACGGGCAGTGCTACGTCTGCGGGCACTGTCG < 41bp 0.419979889503197 0.701263197095783 0.67018276 0.62640464 prediction 0.402526394191566 Functional Gain - GJC2 ENSG00000198835 CDS Human protein_coding chr1:228346649 chr1:228346653 synonymous SNV . 0 25 hm5C_associated_SNPs_129193 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:228346642-228346661
64251 chr1 110586449 110586449 1 + C G MESO 110586448 + 110586428 110586468 41 GACTGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGGCTC GACTGACAGGCTGACTTGCCCGAAAGGGCTCCCGTGGGCTC < 41bp 0.700970917889333 0.902218313180758 0.03125772 0.13571721 prediction 0.40249479058285 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110586448 chr1:110586449 synonymous SNV . 0 22 hm5C_associated_SNPs_129197 0 0 5 BUD13 POSTAR2 ENCODE chr1:110586431-110586521
64251 chr1 227171906 227171906 1 + C T UCEC 227171905 + 227171885 227171925 41 TGGCTTCCCCCTGGACCAGGCCGAAGGGCTCAGCCAGGAGA TGGCTTCCCCCTGGACCAGGCTGAAGGGCTCAGCCAGGAGA < 41bp 0.428515155924118 0.701245866390027 0.26018918 0.26886478 prediction 0.402491732780055 Functional Gain - COQ8A ENSG00000163050 CDS Human protein_coding chr1:227171905 chr1:227171906 synonymous SNV . 0 22 hm5C_associated_SNPs_129198 0 0 8 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:227171882-227171906
64251 chr1 233463810 233463810 1 + C G rs199635611 233463807 + 233463787 233463827 41 GGCGCCGCGGGAGCGACCGACACCCCGGTGTCCTCGGCCGG GGCGCCGCGGGAGCGACCGACACGCCGGTGTCCTCGGCCGG < 41bp 0.508980453083428 0.71021525787537 0.23463514 0.27027994 prediction 0.402469609583884 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233463807 chr1:233463810 synonymous SNV . 0 24 hm5C_associated_SNPs_129203 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:233463805-233463829
64251 chr7 158696400 158696400 1 + A G rs548148678 158696397 + 158696377 158696417 41 CCCCGTGGGGTAGCGCTGCACACAGGGAGGGTCTTTGTGCC CCCCGTGGGGTAGCGCTGCACACGGGGAGGGTCTTTGTGCC < 41bp 0.555007903590076 0.756236833667919 0.17173731 0.8013698 prediction 0.402457860155685 Functional Gain - WDR60 ENSG00000126870 intronic Human protein_coding chr7:158696397 chr7:158696400 . . 0 24 hm5C_associated_SNPs_129210 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr7:158696381-158696408
64251 chr14 97313616 97313616 1 + T C BLCA 97313614 + 97313594 97313634 41 TTCAGAAATGGATTCGTACCCGTAAGCTGAAGTACCTGGGT TTCAGAAATGGATTCGTACCCGCAAGCTGAAGTACCTGGGT < 41bp 0.672679586504146 0.873907196317778 0.47215548 0.39304233 prediction 0.402455219627263 Functional Gain - VRK1 ENSG00000100749 CDS Human protein_coding chr14:97313614 chr14:97313616 synonymous SNV . 0 23 hm5C_associated_SNPs_129211 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr14:97313594-97313616
64251 chr5 76714121 76714121 1 + C T UCEC 76714120 + 76714100 76714140 41 CAGTCCATGACGTGGATCACCCGGGAAGGACCAACTCTTTC CAGTCCATGACGTGGATCACCTGGGAAGGACCAACTCTTTC < 41bp 0.623320707553139 0.824543793810924 0.40088993 0.7172025 prediction 0.40244617251557 Functional Gain - PDE8B ENSG00000113231 CDS Human protein_coding chr5:76714120 chr5:76714121 nonsynonymous SNV 0.922 4 22 hm5C_associated_SNPs_129214 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:76714091-76714126
64251 chr9 91961941 91961941 1 + A G rs569594424 91961938 + 91961918 91961958 41 GCAGAGGGAGATCCCCAAGGCCAAGAAGCCAACCTCACTGA GCAGAGGGAGATCCCCAAGGCCAGGAAGCCAACCTCACTGA < 41bp 0.447056726547292 0.701220642085312 0.09826401 0.36624914 prediction 0.402441284170624 Functional Gain - SECISBP2 ENSG00000187742 CDS Human protein_coding chr9:91961938 chr9:91961941 nonsynonymous SNV 0.998 5 24 hm5C_associated_SNPs_129215 0 0 3 GRWD1 POSTAR2 ENCODE chr9:91961884-91961954
64251 chr19 37064267 37064267 1 + C G rs3096618 37064264 + 37064244 37064284 41 CTGTGGGAAACGTAGTCCAACAACGAAAGAGCCCTGAAGCT CTGTGGGAAACGTAGTCCAACAAGGAAAGAGCCCTGAAGCT < 41bp 0.535417872623181 0.736632453609524 0.0903115 0.57851434 prediction 0.402429161972686 Functional Gain - ZNF529-AS1 ENSG00000233527 ncRNA_exonic Human antisense chr19:37064264 chr19:37064267 . . 0 24 hm5C_associated_SNPs_129216 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819215 chr19:37064267-37064268
64251 chr13 79189950 79189950 1 - T C UCEC 79189953 - 79189933 79189973 41 CCCAAGCTGCTTGTTTCAGACAGAGTTTTCCCAGGGCATTT CCCAAGCTGCTTGTTTCAGACAGGGTTTTCCCAGGGCATTT < 41bp 0.601850090357326 0.80306001892653 0.36052257 0.85873514 prediction 0.402419857138409 Functional Gain - RNF219 ENSG00000152193 CDS Human protein_coding chr13:79189953 chr13:79189950 nonsynonymous SNV 0.999 3 24 hm5C_associated_SNPs_129219 0 0 6 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:79189900-79189960
64251 chr19 49502595 49502595 1 + C T UCEC 49502594 + 49502574 49502614 41 AGACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACA AGACAGCCACAACCAAAGTCCTGGAGATCCGTGATGTAACA < 41bp 0.454994038378336 0.701190894557017 0.24258468 0.084783524 prediction 0.402381789114035 Functional Gain - RUVBL2 ENSG00000183207 CDS Human protein_coding chr19:49502594 chr19:49502595 nonsynonymous SNV 0.989 0 22 hm5C_associated_SNPs_129225 0 0 16 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:49502576-49502614
64251 chr19 2811683 2811683 1 + T C COAD 2811681 + 2811661 2811701 41 CTGTGGAGCGAGGTGTATTCCATGGACATGTTCCACACGCG CTGTGGAGCGAGGTGTATTCCACGGACATGTTCCACACGCG < 41bp 0.661379852196622 0.862566640810216 0.500615 0.41108006 prediction 0.402373577227189 Functional Gain - THOP1 ENSG00000172009 CDS Human protein_coding chr19:2811681 chr19:2811683 nonsynonymous SNV 1.000 0 23 hm5C_associated_SNPs_129228 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:2811653-2811687
64251 chr16 68380086 68380086 1 + T G UCEC 68380083 + 68380063 68380103 41 GAGAGTCCGCCAGATGCGCCCCGTGTGTGACTGCCAGGCTC GAGAGTCCGCCAGATGCGCCCCGGGTGTGACTGCCAGGCTC < 41bp 0.289680791077123 0.701181167046956 0.118566275 0.89324975 prediction 0.402362334093911 Functional Gain - PRMT7 ENSG00000132600 CDS Human protein_coding chr16:68380083 chr16:68380086 nonsynonymous SNV 0.932 3 24 hm5C_associated_SNPs_129230 0 0 3 DDX24 POSTAR2 ENCODE chr16:68380052-68380182
64251 chr1 55521731 55521731 1 + C T LUSC 55521730 + 55521710 55521750 41 CCACTGGTGGTGCTGCTGCCCCTGGCGGGTGGGTACAGCCG CCACTGGTGGTGCTGCTGCCCTTGGCGGGTGGGTACAGCCG < 41bp 0.454051938991416 0.701180733531797 0.18604657 0.07153255 prediction 0.402361467063594 Functional Gain - PCSK9 ENSG00000169174 CDS Human protein_coding chr1:55521730 chr1:55521731 synonymous SNV . 0 22 hm5C_associated_SNPs_129231 0 0 6 NONO POSTAR2 ENCODE chr1:55521724-55521789
64251 chr6 79944327 79944327 1 - G C BRCA 79944328 - 79944308 79944348 41 GGCAGCATCCAGCGGCGGCGCCAGCAGTTCCAGTCCGTTGC GGCAGCATCCAGCGGCGGCGCGAGCAGTTCCAGTCCGTTGC < 41bp 0.450363861312029 0.701177835151899 0.31070232 0.36120772 prediction 0.402355670303798 Functional Gain - HMGN3-AS1 ENSG00000270362 ncRNA_exonic Human antisense chr6:79944328 chr6:79944327 . . 0 22 hm5C_associated_SNPs_129235 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:79944280-79944340
64251 chr4 57797801 57797801 1 + T C GBM 57797799 + 57797779 57797819 41 ATTTCATCCTCTGGACAAAACTTGAATACGCCAGAGGGTGA ATTTCATCCTCTGGACAAAACTCGAATACGCCAGAGGGTGA < 41bp 0.588644916990887 0.78981848286298 0.17049992 0.6060621 prediction 0.402347131744186 Functional Gain - REST ENSG00000084093 CDS Human protein_coding chr4:57797799 chr4:57797801 nonsynonymous SNV 0.000 0 23 hm5C_associated_SNPs_129237 0 0 12 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr4:57797738-57797801
64251 chr10 114169396 114169396 1 + A G LIHC 114169393 + 114169373 114169413 41 CCTTTGATGATGACCTGAAGCAAAGAGGGGAGAAGAGTGGA CCTTTGATGATGACCTGAAGCAAGGAGGGGAGAAGAGTGGA < 41bp 0.458292456084345 0.701171652974035 0.30544657 0.34982133 prediction 0.402343305948071 Functional Gain - ACSL5 ENSG00000197142 CDS Human protein_coding chr10:114169393 chr10:114169396 nonsynonymous SNV 0.997 3 24 hm5C_associated_SNPs_129239 0 0 1 PPIG POSTAR2 ENCODE chr10:114169370-114169413
64251 chr12 52464142 52464142 1 + T A rs558671796 52464138 + 52464118 52464158 41 TTTTCTGGTTTTGCTTTTAGCTGGTCTCTTGTGGCTCAGCG TTTTCTGGTTTTGCTTTTAGCTGGACTCTTGTGGCTCAGCG < 41bp 0.6112894533679 0.812458853923565 0.41187987 0.44841453 prediction 0.402338801111331 Functional Gain - ATG101 ENSG00000123395 UTR5 Human protein_coding chr12:52464138 chr12:52464142 . . 0 25 hm5C_associated_SNPs_129240 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:52464122-52464160
64251 chr3 128615338 128615338 1 + C T rs111716284 128615337 + 128615317 128615357 41 ATACTTGCCTAAACTGGCGTCCGGGGAGCACATTGCAGCCT ATACTTGCCTAAACTGGCGTCTGGGGAGCACATTGCAGCCT < 41bp 0.62801036123596 0.82917518294743 0.91165215 0.8916624 prediction 0.40232964342294 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128615337 chr3:128615338 synonymous SNV . 0 22 hm5C_associated_SNPs_129244 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:128615309-128615343
64251 chr17 73102073 73102073 1 + C T COAD 73102072 + 73102052 73102092 41 GCCATGAGTGGCTCTTATGGCCAAAGGCGGTACTGCAGGCC GCCATGAGTGGCTCTTATGGCTAAAGGCGGTACTGCAGGCC < 41bp 0.457823099586957 0.7011623292036 0.9155425 0.7708535 prediction 0.4023246584072 Functional Gain - SLC16A5 ENSG00000170190 CDS Human protein_coding chr17:73102072 chr17:73102073 nonsynonymous SNV 0.004 2 22 hm5C_associated_SNPs_129246 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:73102062-73102113
64251 chr17 46972581 46972581 1 + C T GBM 46972580 + 46972560 46972600 41 TTCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCAGC TTCCAGACCAGTGTTGTCTCCTGGGACATTGACACAGCAGC < 41bp 0.634291776173677 0.835450137077255 0.8489721 0.443347 prediction 0.402316721807157 Functional Gain - ATP5G1 ENSG00000159199 CDS Human protein_coding chr17:46972580 chr17:46972581 nonsynonymous SNV 0.999 1 22 hm5C_associated_SNPs_129248 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr17:46972572-46972620
64251 chrX 134987501 134987501 1 + T G COAD 134987497 + 134987477 134987517 41 TCTTGTCAACTGCTCCACCACAGCTTGTTCATATGGCTGCA TCTTGTCAACTGCTCCACCACAGCGTGTTCATATGGCTGCA < 41bp 0.558499934375531 0.759654921386784 0.03408745 0.04974425 prediction 0.402309974022505 Functional Gain - SAGE1 ENSG00000181433 CDS Human protein_coding chrX:134987497 chrX:134987501 nonsynonymous SNV 0.002 0 25 hm5C_associated_SNPs_129252 0 0 1 ZNF622 POSTAR2 ENCODE chrX:134987442-134987526
64251 chr16 28898793 28898793 1 + T C rs6565259 28898790 + 28898770 28898810 41 GCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGAT GCCTTGGGCATCGTGGCCACCACCGGTGTGGGCACCGAGAT < 41bp 0.569660531009666 0.770797002891906 0.19892842 0.2660172 prediction 0.40227294376448 Functional Gain - ATP2A1 ENSG00000196296 CDS Human protein_coding chr16:28898790 chr16:28898793 synonymous SNV . 0 24 hm5C_associated_SNPs_129256 2 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:28898778-28898821
64251 chr1 15479182 15479182 1 + T G rs193036293 15479178 + 15479158 15479198 41 TTCCCTCTGTGTTTAGCATCCACGTTTTTTGGCGGTCTGGC TTCCCTCTGTGTTTAGCATCCACGGTTTTTGGCGGTCTGGC < 41bp 0.509006880223004 0.710142388772727 0.25948042 0.16733497 prediction 0.402271017099446 Functional Gain - TMEM51 ENSG00000171729 UTR5 Human protein_coding chr1:15479178 chr1:15479182 . . 0 25 hm5C_associated_SNPs_129257 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819215 chr1:15479182-15479183
64251 chr2 173354378 173354378 1 + A G KIRC 173354375 + 173354355 173354395 41 CACAAAAGGAGATAAACTCCCTGAACCTAACGGTATGTCGG CACAAAAGGAGATAAACTCCCTGGACCTAACGGTATGTCGG < 41bp 0.468234547038223 0.701131752482566 0.0743373 0.2093383 prediction 0.402263504965132 Functional Gain - ITGA6 ENSG00000091409 CDS Human protein_coding chr2:173354375 chr2:173354378 nonsynonymous SNV 0.013 0 24 hm5C_associated_SNPs_129259 0 0 1 PRPF8 POSTAR2 ENCODE chr2:173354367-173354418
64251 chr12 48134791 48134791 1 + C T SKCM 48134790 + 48134770 48134810 41 GTCCAGCCCCTCAGCAGAGCCCACAGTGGGCCCCAGCTGGT GTCCAGCCCCTCAGCAGAGCCTACAGTGGGCCCCAGCTGGT < 41bp 0.612619438483178 0.813749380302068 0.06009808 0.8974403 prediction 0.40225988363778 Functional Gain - RAPGEF3 ENSG00000079337 CDS Human protein_coding chr12:48134790 chr12:48134791 synonymous SNV . 0 22 hm5C_associated_SNPs_129262 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr12:48134763-48134801
64251 chr3 52512495 52512495 1 + C T SKCM 52512494 + 52512474 52512514 41 GTCCGGAGCATAGGCAGCCTCCCGTGTCTGGAGCACGTGTC GTCCGGAGCATAGGCAGCCTCTCGTGTCTGGAGCACGTGTC < 41bp 0.429096792027643 0.701128679572616 0.35367483 0.43095082 prediction 0.402257359145233 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52512494 chr3:52512495 nonsynonymous SNV 0.961 3 22 hm5C_associated_SNPs_129263 0 0 4 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr3:52512484-52512503
64251 chr15 51295402 51295402 1 + T A rs529440596 51295400 + 51295380 51295420 41 ACTAACAGTTGTAGGAGATCCATGAGCATGCTGGATATTGA ACTAACAGTTGTAGGAGATCCAAGAGCATGCTGGATATTGA < 41bp 0.52642065677092 0.727548969683389 0.22847307 0.36684772 prediction 0.402256625824939 Functional Gain - AP4E1 ENSG00000081014 UTR3 Human protein_coding chr15:51295400 chr15:51295402 . . 0 23 hm5C_associated_SNPs_129264 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:51295346-51295412
64251 chr16 2510640 2510640 1 + C T LUSC 2510639 + 2510619 2510659 41 TGCAGGGAACCAACTGGGACCCGGGCTTTGAAGCCACCTCC TGCAGGGAACCAACTGGGACCTGGGCTTTGAAGCCACCTCC < 41bp 0.502363776783627 0.703490667600997 0.9063138 0.8438586 prediction 0.402253781634739 Functional Gain - C16orf59 ENSG00000162062 CDS Human protein_coding chr16:2510639 chr16:2510640 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_129265 0 0 1 DDX3X POSTAR2 ENCODE chr16:2510622-2510647
64251 chr14 29237784 29237784 1 + C A STAD 29237780 + 29237760 29237800 41 AATGACTTCGCAGAGCAGCACGTCCATGAGCGCCAGGGCCG AATGACTTCGCAGAGCAGCACGTCAATGAGCGCCAGGGCCG < 41bp 0.289635374768175 0.701102720417607 0.42143053 0.23201865 prediction 0.402205440835215 Functional Gain - FOXG1 ENSG00000176165 CDS Human protein_coding chr14:29237780 chr14:29237784 synonymous SNV . 0 25 hm5C_associated_SNPs_129277 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr14:29237752-29237793
64251 chr12 112572675 112572675 1 + C A LUSC 112572671 + 112572651 112572691 41 ACTCACATGGCTGCAGAACACTGTCAGGTGAGCCACCAAGT ACTCACATGGCTGCAGAACACTGTAAGGTGAGCCACCAAGT < 41bp 0.271836204575667 0.701097288257966 0.04989168 0.22975335 prediction 0.402194576515932 Functional Gain - TRAFD1 ENSG00000135148 CDS Human protein_coding chr12:112572671 chr12:112572675 nonsynonymous SNV 1.000 3 25 hm5C_associated_SNPs_129279 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:112572650-112572677
64251 chr7 101200855 101200855 1 + C T SKCM 101200854 + 101200834 101200874 41 TATCCTGGCTAGAGACCCAGCCCCAGAGGCCTGAGCCGCCG TATCCTGGCTAGAGACCCAGCTCCAGAGGCCTGAGCCGCCG < 41bp 0.589962136050351 0.791058505704906 0.12830937 0.92548037 prediction 0.40219273930911 Functional Gain - COL26A1 ENSG00000160963 UTR3 Human protein_coding chr7:101200854 chr7:101200855 . . 0 22 hm5C_associated_SNPs_129281 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:101200845-101200887
64251 chr22 24953681 24953681 1 + C T UCEC 24953680 + 24953660 24953700 41 GATTAAAGTACTGCATGAGGCCGAGGGCCACATTGTGACAT GATTAAAGTACTGCATGAGGCTGAGGGCCACATTGTGACAT < 41bp 0.603234516166941 0.804299312757873 0.13965577 0.10926339 prediction 0.402129593181863 Functional Gain - SNRPD3 ENSG00000100028 CDS Human protein_coding chr22:24953680 chr22:24953681 synonymous SNV . 0 22 hm5C_associated_SNPs_129292 0 0 52 SRRM4 POSTAR2 GSE57278,GSM1378374 chr22:24953620-24953700
64251 chr22 33197655 33197655 1 + C A rs550350524 33197654 + 33197634 33197674 41 GAGGCGGGGTCCCCGGGGGCCCAGCGCTATATCACTCGGCC GAGGCGGGGTCCCCGGGGGCCAAGCGCTATATCACTCGGCC < 41bp 0.50171235270747 0.702775384940765 0.8932972 0.8953115 prediction 0.40212606446659 Functional Gain - TIMP3 ENSG00000185666 intronic Human protein_coding chr22:33197654 chr22:33197655 . . 0 22 hm5C_associated_SNPs_129293 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr22:33197630-33197664
64251 chr2 177053619 177053619 1 + C T rs370320082 177053618 + 177053598 177053638 41 GGCACCCAAGTTCTGCCGCTCCGACGCCCGGCCCGTGGCTC GGCACCCAAGTTCTGCCGCTCTGACGCCCGGCCCGTGGCTC < 41bp 0.491072308978682 0.701061800625766 0.26312453 0.18483949 prediction 0.402123601251531 Functional Gain - HOXD1 ENSG00000128645 CDS Human protein_coding chr2:177053618 chr2:177053619 synonymous SNV . 0 22 hm5C_associated_SNPs_129294 0 0 1 DDX3X POSTAR2 ENCODE chr2:177053598-177053669
64251 chr2 73476280 73476280 1 + T C COAD 73476278 + 73476258 73476298 41 TGTTCTGTGCTGGCCGAGTACCTGAGGAGGATCTGAAGAGG TGTTCTGTGCTGGCCGAGTACCCGAGGAGGATCTGAAGAGG < 41bp 0.682607541207042 0.883667796990101 0.5490822 0.5798712 prediction 0.402120511566119 Functional Gain - CCT7 ENSG00000135624 CDS Human protein_coding chr2:73476278 chr2:73476280 synonymous SNV . 0 23 hm5C_associated_SNPs_129295 0 0 37 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:73476116-73476315
64251 chr16 90024045 90024045 1 + C T UCEC 90024044 + 90024024 90024064 41 GTGGTGCGACTCATCCACCTCCGGCTGAAGCTCCAGGAGCT GTGGTGCGACTCATCCACCTCTGGCTGAAGCTCCAGGAGCT < 41bp 0.457582964396466 0.70105600877405 0.82631063 0.56278175 prediction 0.402112017548101 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90024044 chr16:90024045 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_129300 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:90024018-90024050
64251 chr8 144732203 144732203 1 + C T SKCM 144732202 + 144732182 144732222 41 AGTCTGAGGAAGTCCACGAGCCCAGATTAGGGGAGCTCTTG AGTCTGAGGAAGTCCACGAGCTCAGATTAGGGGAGCTCTTG < 41bp 0.595113740283923 0.796168205088704 0.1010865 0.058246285 prediction 0.402108929609561 Functional Gain - ZNF623 ENSG00000183309 CDS Human protein_coding chr8:144732202 chr8:144732203 nonsynonymous SNV 0.049 1 22 hm5C_associated_SNPs_129301 0 0 1 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr8:144732200-144732220
64251 chr19 9491970 9491970 1 + T C COAD 9491967 + 9491947 9491987 41 TGTGATCACTGTGGAAAATCCTTTAGCCAGAGCTCTCATCT TGTGATCACTGTGGAAAATCCTTCAGCCAGAGCTCTCATCT < 41bp 0.472713843467272 0.701050582636841 0.018274903 0.04318151 prediction 0.402101165273681 Functional Gain - ZNF177;ZNF559-ZNF177 ENSG00000188629;ENSG00000270011 CDS Human other chr19:9491967 chr19:9491970 synonymous SNV . 0 24 hm5C_associated_SNPs_129303 0 0 1 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:9491938-9491991
64251 chr4 17616319 17616319 1 + C A LUAD 17616318 + 17616298 17616338 41 TATGTTTTCTGGGCAGCCACCCGGTCCCCCTCAGGCCCCGC TATGTTTTCTGGGCAGCCACCAGGTCCCCCTCAGGCCCCGC < 41bp 0.646686539599192 0.847730918127155 0.3664751 0.8396393 prediction 0.402088757055926 Functional Gain - MED28 ENSG00000118579 CDS Human protein_coding chr4:17616318 chr4:17616319 synonymous SNV . 0 22 hm5C_associated_SNPs_129308 0 0 19 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:17616270-17616326
64251 chr7 116770653 116770653 1 + A G UCEC 116770650 + 116770630 116770670 41 GACTCGGACCATCTGCGTCCCGCAGATGCAAGTATGAAAAA GACTCGGACCATCTGCGTCCCGCGGATGCAAGTATGAAAAA < 41bp 0.598800074314846 0.799843259390566 0.79652655 0.55547047 prediction 0.402086370151439 Functional Gain - ST7 ENSG00000004866 CDS Human protein_coding chr7:116770650 chr7:116770653 synonymous SNV . 0 24 hm5C_associated_SNPs_129309 0 0 2 PRPF8 POSTAR2 ENCODE chr7:116770531-116770694
64251 chr19 48785666 48785666 1 + C T UCEC 48785665 + 48785645 48785685 41 AGACGTGGCTGTGAACTTCACCAAAGAGGAGTGGACCCTGC AGACGTGGCTGTGAACTTCACTAAAGAGGAGTGGACCCTGC < 41bp 0.624981081990081 0.826022889648012 0.08364838 0.099268675 prediction 0.402083615315863 Functional Gain - ZNF114 ENSG00000178150 CDS Human protein_coding chr19:48785665 chr19:48785666 synonymous SNV . 0 22 hm5C_associated_SNPs_129311 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:48785630-48785668
64251 chr7 127338982 127338982 1 + C A STAD 127338981 + 127338961 127339001 41 GTTGCAGAGGGCTTAGCCACCCGGAGAGAAGGCATGAGAGC GTTGCAGAGGGCTTAGCCACCAGGAGAGAAGGCATGAGAGC < 41bp 0.640209147053404 0.841250179178014 0.7920027 0.89381707 prediction 0.40208206424922 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127338981 chr7:127338982 synonymous SNV . 0 22 hm5C_associated_SNPs_129312 0 0 9 DDX24 POSTAR2 ENCODE chr7:127338943-127339003
64251 chr17 40947498 40947498 1 - G A SKCM 40947499 - 40947479 40947519 41 CTGGCTTCCCCTGGGAGGGGCCGAGCAGGAGGTGGTGAGGC CTGGCTTCCCCTGGGAGGGGCTGAGCAGGAGGTGGTGAGGC < 41bp 0.502198798682491 0.703236454054398 0.83602333 0.8607768 prediction 0.402075310743813 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947499 chr17:40947498 nonsynonymous SNV 0.155 0 22 hm5C_associated_SNPs_129315 0 0 1 CSTF2T POSTAR2 ENCODE chr17:40947434-40947597
64251 chr6 37138220 37138220 1 + C G rs262936 37138216 + 37138196 37138236 41 TCGGCCTTCCGCGCCAGCCGCAGCCACAGCCGCAACGCCAC TCGGCCTTCCGCGCCAGCCGCAGCGACAGCCGCAACGCCAC < 41bp 0.621455075125354 0.822487142466903 0.85514385 0.9056855 prediction 0.4020641346831 Functional Gain - PIM1 ENSG00000137193 UTR5 Human protein_coding chr6:37138216 chr6:37138220 . . 0 25 hm5C_associated_SNPs_129318 0 0 6 DDX3X POSTAR2 ENCODE chr6:37138173-37138230
64251 chr16 8942941 8942941 1 + C G rs78698557 8942937 + 8942917 8942957 41 TGGGGCCAGGGGAGCCCAGGCTGCCCTGCACTCCTGCCTCC TGGGGCCAGGGGAGCCCAGGCTGCGCTGCACTCCTGCCTCC < 41bp 0.6563574561215 0.857389101176197 0.05051264 0.11801103 prediction 0.402063290109394 Functional Gain - PMM2 ENSG00000260276 ncRNA_exonic Human antisense chr16:8942937 chr16:8942941 . . 0 25 hm5C_associated_SNPs_129319 1 0 3 RBM15 POSTAR2 ENCODE chr16:8942859-8942965
64251 chr9 35792588 35792588 1 + C T STAD 35792587 + 35792567 35792607 41 GGCTCTGGGCCGGGCACTGCCCGTGGACCTGCGGTTTGTCA GGCTCTGGGCCGGGCACTGCCTGTGGACCTGCGGTTTGTCA < 41bp 0.472605319188889 0.701028341753755 0.23660219 0.09641725 prediction 0.402056683507509 Functional Gain - NPR2 ENSG00000159899 CDS Human protein_coding chr9:35792587 chr9:35792588 synonymous SNV . 0 22 hm5C_associated_SNPs_129322 0 0 2 CSTF2T POSTAR2 ENCODE chr9:35792558-35792613
64251 chr14 24649011 24649011 1 + T G UCEC 24649008 + 24648988 24649028 41 GGTTCTTGATCCCTATAGGGCAGTGGCACTGGAGCTGCAGG GGTTCTTGATCCCTATAGGGCAGGGGCACTGGAGCTGCAGG < 41bp 0.326303480118953 0.701024067927054 0.1484496 0.88323003 prediction 0.402048135854107 Functional Gain - REC8 ENSG00000100918 CDS Human protein_coding chr14:24649008 chr14:24649011 nonsynonymous SNV 0.938 2 24 hm5C_associated_SNPs_129325 0 0 3 SF3A3 POSTAR2 ENCODE chr14:24648931-24649031
64251 chr4 79697540 79697540 1 + A G rs139143500 79697537 + 79697517 79697557 41 CCGCGGAGCGGGCGGCGGGGCCCAGGCTGTGCGCTTGGGGA CCGCGGAGCGGGCGGCGGGGCCCGGGCTGTGCGCTTGGGGA < 41bp 0.598007688710998 0.799026278068025 0.35338932 0.5808141 prediction 0.402037178714053 Functional Gain - BMP2K ENSG00000138756 UTR5 Human protein_coding chr4:79697537 chr4:79697540 . . 0 24 hm5C_associated_SNPs_129327 0 0 6 DDX3X POSTAR2 ENCODE chr4:79697515-79697614
64251 chr19 46025800 46025800 1 + C T ESCA 46025799 + 46025779 46025819 41 AGCTGGGGCCCCAGGCCTGGCCGCAGCTATTGCTGGAGCCA AGCTGGGGCCCCAGGCCTGGCTGCAGCTATTGCTGGAGCCA < 41bp 0.639369663370285 0.840386215475711 0.55083495 0.68148774 prediction 0.402033104210852 Functional Gain - VASP ENSG00000125753 CDS Human protein_coding chr19:46025799 chr19:46025800 nonsynonymous SNV 0.787 0 22 hm5C_associated_SNPs_129330 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:46025795-46025817
64251 chr20 36032290 36032290 1 + C T rs186211090 36032289 + 36032269 36032309 41 ACACCTGTAGGCAGAGGCTGCCGAGACAGACCCTCTGCCGC ACACCTGTAGGCAGAGGCTGCTGAGACAGACCCTCTGCCGC < 41bp 0.521914798823082 0.722930683000321 0.91873497 0.88341856 prediction 0.402031768354478 Functional Gain - SRC ENSG00000197122 UTR3 Human protein_coding chr20:36032289 chr20:36032290 . . 0 22 hm5C_associated_SNPs_129331 0 0 1 RPS5 POSTAR2 ENCODE chr20:36032230-36032301
64251 chr19 9958760 9958760 1 + A G UCEC 9958757 + 9958737 9958777 41 GGACTTTGAGTCTCTGGCCTCACAGTTCAGCGACTGCAGCT GGACTTTGAGTCTCTGGCCTCACGGTTCAGCGACTGCAGCT < 41bp 0.627382340451592 0.828395575252079 0.30842534 0.6987481 prediction 0.402026469600975 Functional Gain - PIN1 ENSG00000127445 CDS Human protein_coding chr19:9958757 chr19:9958760 nonsynonymous SNV 0.991 1 24 hm5C_associated_SNPs_129332 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr19:9958722-9958788
64251 chr10 104679712 104679712 1 + T C UCEC 104679710 + 104679690 104679730 41 GAAGGGGAGCGCTCCAATATCGTGGACCTGCTGTTTGTCAA GAAGGGGAGCGCTCCAATATCGCGGACCTGCTGTTTGTCAA < 41bp 0.654532922838387 0.85554525359454 0.92679787 0.9284196 prediction 0.402024661512305 Functional Gain - CNNM2 ENSG00000148842 CDS Human protein_coding chr10:104679710 chr10:104679712 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_129334 0 0 2 BUD13 POSTAR2 ENCODE chr10:104679630-104679778
64251 chr1 233507873 233507873 1 + C T SKCM 233507872 + 233507852 233507892 41 AGTTCCAGTCCCCCGAGCAGCCCCACAATGATGCCCCGACT AGTTCCAGTCCCCCGAGCAGCTCCACAATGATGCCCCGACT < 41bp 0.411080440327462 0.701000693443972 0.27353847 0.8554486 prediction 0.402001386887945 Functional Gain - MAP3K21 ENSG00000143674 CDS Human protein_coding chr1:233507872 chr1:233507873 nonsynonymous SNV 0.113 3 22 hm5C_associated_SNPs_129342 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:233507839-233507873
64251 chr2 224824624 224824624 1 + C T SARC 224824623 + 224824603 224824643 41 TTAACACTGAGTGAAGAATTCCCAGTGCCCCCAGCTGTGTT TTAACACTGAGTGAAGAATTCTCAGTGCCCCCAGCTGTGTT < 41bp 0.435654894413351 0.700992277035406 0.07752776 0.07678133 prediction 0.401984554070812 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224824623 chr2:224824624 nonsynonymous SNV 0.856 4 22 hm5C_associated_SNPs_129346 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:224824618-224824641
64251 chr11 46726757 46726757 1 + C T GBM 46726756 + 46726736 46726776 41 TTCCTGTGCCCGCACTGTGGCCGGGCGTTTCGTCAGCGGGG TTCCTGTGCCCGCACTGTGGCTGGGCGTTTCGTCAGCGGGG < 41bp 0.567053074141998 0.768042541443375 0.78545654 0.5008079 prediction 0.401978934602754 Functional Gain - ZNF408 ENSG00000175213 CDS Human protein_coding chr11:46726756 chr11:46726757 nonsynonymous SNV 0.975 1 22 hm5C_associated_SNPs_129348 0 0 1 RBM15 POSTAR2 ENCODE chr11:46726749-46726801
64251 chr19 15807817 15807817 1 + C G LUAD 15807813 + 15807793 15807833 41 CCTGCCAGACCACACTGAGCCCCGCAGGAAGCTGGAATTGA CCTGCCAGACCACACTGAGCCCCGGAGGAAGCTGGAATTGA < 41bp 0.414548365700255 0.700989318406544 0.21365607 0.20805198 prediction 0.401978636813087 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807813 chr19:15807817 synonymous SNV . 0 25 hm5C_associated_SNPs_129349 0 0 1 LSM11 POSTAR2 ENCODE chr19:15807761-15807824
64251 chr2 177017509 177017509 1 + C T SKCM 177017508 + 177017488 177017528 41 CGCCAGATCAAGATCTGGTTCCAGAACCGGAGGATGAAGTG CGCCAGATCAAGATCTGGTTCTAGAACCGGAGGATGAAGTG < 41bp 0.628741123184335 0.829723444763181 0.30923593 0.23171744 prediction 0.401964643157692 Functional Gain - HOXD4 ENSG00000170166 CDS Human protein_coding chr2:177017508 chr2:177017509 stopgain 1.000 1 22 hm5C_associated_SNPs_129352 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:177017478-177017510
64251 chr10 114711317 114711317 1 + T C GBM 114711315 + 114711295 114711335 41 CCCTTCATCATGATCCCCGACCTGACGAGCCCCTACCTCCC CCCTTCATCATGATCCCCGACCCGACGAGCCCCTACCTCCC < 41bp 0.532501836340166 0.733481710733471 0.035719514 0.03512627 prediction 0.40195974878661 Functional Gain - TCF7L2 ENSG00000148737 CDS Human protein_coding chr10:114711315 chr10:114711317 nonsynonymous SNV 0.999 4 23 hm5C_associated_SNPs_129354 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221658 chr10:114711300-114711320
64251 chr8 104383964 104383964 1 + C G rs556757186 104383963 + 104383943 104383983 41 TGCTGCTGCAGCTGCCCGCGCCGTCGAGCGCCTCTGAGATC TGCTGCTGCAGCTGCCCGCGCGGTCGAGCGCCTCTGAGATC < 41bp 0.385380016698186 0.700975511670612 0.24655047 0.37797415 prediction 0.401951023341224 Functional Gain - CTHRC1 ENSG00000164932 CDS Human protein_coding chr8:104383963 chr8:104383964 nonsynonymous SNV 0.989 2 22 hm5C_associated_SNPs_129358 0 0 1 DDX3X POSTAR2 ENCODE chr8:104383831-104384020
64251 chr1 228645845 228645845 1 + C T COAD 228645844 + 228645824 228645864 41 AGCCATCATGCCAGACCCGTCCAAATCGGCTCCTGCGCCCA AGCCATCATGCCAGACCCGTCTAAATCGGCTCCTGCGCCCA < 41bp 0.474797974544138 0.700965387724412 0.34395677 0.38198435 prediction 0.401930775448823 Functional Gain - HIST3H2BB ENSG00000196890 CDS Human protein_coding chr1:228645844 chr1:228645845 synonymous SNV . 0 22 hm5C_associated_SNPs_129361 0 0 30 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:228645800-228645880
64251 chr15 89743512 89743512 1 + C G rs550194898 89743511 + 89743491 89743531 41 CTTGCAGGATTGCACAGCAGCCGGGCAGAGGCGCTCCTCAC CTTGCAGGATTGCACAGCAGCGGGGCAGAGGCGCTCCTCAC < 41bp 0.661395672025968 0.862360284984502 0.32889438 0.91569304 prediction 0.401929225917067 Functional Gain - ABHD2 ENSG00000140526 UTR3 Human protein_coding chr15:89743511 chr15:89743512 . . 0 22 hm5C_associated_SNPs_129362 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:89743489-89743533
64251 chr11 70279785 70279785 1 + C A UCEC 70279781 + 70279761 70279801 41 ACCTACGATGAGTACGAGAACGATCTGGGGATCACAGCCGT ACCTACGATGAGTACGAGAACGATATGGGGATCACAGCCGT < 41bp 0.28122420081078 0.700961267352291 0.17123237 0.18835491 prediction 0.401922534704582 Functional Gain - CTTN ENSG00000085733 CDS Human protein_coding chr11:70279781 chr11:70279785 nonsynonymous SNV 0.854 2 25 hm5C_associated_SNPs_129363 0 0 16 HNRNPC POSTAR2 GSE56010,GSM1350197 chr11:70279746-70279815
64251 chr8 28908604 28908604 1 + C A LIHC 28908603 + 28908583 28908623 41 GTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGC GTGGAAATGGCAGCAGTCAACAACACTATCTTGGCATTGGC < 41bp 0.457138341195234 0.700945061472445 0.123491526 0.19375336 prediction 0.40189012294489 Functional Gain - HMBOX1 ENSG00000147421 CDS Human protein_coding chr8:28908603 chr8:28908604 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_129368 0 0 6 FIP1L1 POSTAR2 GSE37401,GSM917675 chr8:28908588-28908610
64251 chr12 31242073 31242073 1 + T C CHOL 31242071 + 31242051 31242091 41 AGGATGTTCGGCTGGTCTCCCTTGGCTCCCGGCAGGTAAAC AGGATGTTCGGCTGGTCTCCCTCGGCTCCCGGCAGGTAAAC < 41bp 0.476611889498414 0.70093341779945 0.11024353 0.2512943 prediction 0.4018668355989 Functional Gain - DDX11 ENSG00000013573 CDS Human protein_coding chr12:31242071 chr12:31242073 synonymous SNV . 0 23 hm5C_associated_SNPs_129373 0 0 19 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:31242044-31242075
64251 chr3 101573519 101573519 1 + A G SKCM 101573516 + 101573496 101573536 41 ACATGCTGGATATTAAAGAGCACAATGGACAGGTGAGGACC ACATGCTGGATATTAAAGAGCACGATGGACAGGTGAGGACC < 41bp 0.618236589434969 0.819160809916163 0.036118984 0.078237444 prediction 0.401848440962388 Functional Gain - NFKBIZ ENSG00000144802 CDS Human protein_coding chr3:101573516 chr3:101573519 nonsynonymous SNV 1.000 3 24 hm5C_associated_SNPs_129376 0 0 6 BUD13 POSTAR2 ENCODE chr3:101573487-101573525
64251 chr5 109106207 109106207 1 + C T LUSC 109106206 + 109106186 109106226 41 TGGTTGTCCCTGGGGAGTCCCCCCAGAAACAATACATCCTG TGGTTGTCCCTGGGGAGTCCCTCCAGAAACAATACATCCTG < 41bp 0.417129325100804 0.700923775944612 0.052253395 0.9642407 prediction 0.401847551889225 Functional Gain - MAN2A1 ENSG00000112893 CDS Human protein_coding chr5:109106206 chr5:109106207 synonymous SNV . 0 22 hm5C_associated_SNPs_129377 0 0 5 IGF2BP1 POSTAR2 ENCODE chr5:109106179-109106243
64251 chr1 36752576 36752576 1 + C G OV 36752575 + 36752555 36752595 41 CTGAGTCCTCGGGAGCGAAGCCCAGCTCTCAAAAGCCCCCT CTGAGTCCTCGGGAGCGAAGCGCAGCTCTCAAAAGCCCCCT < 41bp 0.369550933015883 0.700923455254022 0.120444775 0.23915288 prediction 0.401846910508044 Functional Gain - THRAP3 ENSG00000054118 CDS Human protein_coding chr1:36752575 chr1:36752576 nonsynonymous SNV 0.999 4 22 hm5C_associated_SNPs_129378 0 0 10 FMR1 POSTAR2 ENCODE chr1:36752565-36752645
64251 chr10 3143147 3143147 1 + C A SARC 3143143 + 3143123 3143163 41 GGGTGACTGGAGGGAGAAGCCTGGCTGCTGGTCACACCGCT GGGTGACTGGAGGGAGAAGCCTGGATGCTGGTCACACCGCT < 41bp 0.730839683127581 0.931759502506216 0.44186488 0.48817718 prediction 0.40183963875727 Functional Gain - PFKP ENSG00000067057 CDS Human protein_coding chr10:3143143 chr10:3143147 synonymous SNV . 0 25 hm5C_associated_SNPs_129380 0 0 1 EIF4G2 POSTAR2 ENCODE chr10:3143117-3143190
64251 chr1 93584949 93584949 1 + C A COAD 93584945 + 93584925 93584965 41 GACCAGAATACCTCAAACGTCTACCATTACAGTGGTAAGTG GACCAGAATACCTCAAACGTCTACAATTACAGTGGTAAGTG < 41bp 0.273960604033497 0.700903532846306 0.08757824 0.8309567 prediction 0.401807065692613 Functional Gain - MTF2 ENSG00000143033 CDS Human protein_coding chr1:93584945 chr1:93584949 nonsynonymous SNV 1.000 1 25 hm5C_associated_SNPs_129387 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:93584904-93584949
64251 chr7 104748202 104748202 1 + C T UCEC 104748201 + 104748181 104748221 41 TTGGAGGTTGGAGGAGGCTTCCGAATAAGTGAGTCAAAGTG TTGGAGGTTGGAGGAGGCTTCTGAATAAGTGAGTCAAAGTG < 41bp 0.450523011595054 0.700898464329082 0.38794705 0.3953666 prediction 0.401796928658164 Functional Gain - KMT2E ENSG00000005483 CDS Human protein_coding chr7:104748201 chr7:104748202 stopgain 1.000 0 22 hm5C_associated_SNPs_129389 0 0 4 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr7:104748187-104748203
64251 chr16 8729135 8729135 1 + C G rs530526653 8729132 + 8729112 8729152 41 GGCACGGGGCTCGCTAGCATCATCGCAGCCACCATGGCACG GGCACGGGGCTCGCTAGCATCATGGCAGCCACCATGGCACG < 41bp 0.517611056235076 0.718505443779434 0.6085416 0.86004627 prediction 0.401788775088717 Functional Gain - METTL22 ENSG00000067365 CDS Human protein_coding chr16:8729132 chr16:8729135 nonsynonymous SNV 0.361 3 24 hm5C_associated_SNPs_129392 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr16:8729133-8729171
64251 chr17 78196510 78196510 1 + C G HNSC 78196509 + 78196489 78196529 41 GTATTTCTTCCTGGGCACCTCCCGGGATGTGACTCTGGGCC GTATTTCTTCCTGGGCACCTCGCGGGATGTGACTCTGGGCC < 41bp 0.704780662983912 0.905674741736209 0.27270395 0.3682894 prediction 0.401788157504594 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78196509 chr17:78196510 synonymous SNV . 0 22 hm5C_associated_SNPs_129393 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr17:78196489-78196527
64251 chr1 212459623 212459623 1 + C T rs351403 212459622 + 212459602 212459642 41 GGCAGAGCTGCACCCGCTGCCCCAGCTCAAAGGTAACCTCC GGCAGAGCTGCACCCGCTGCCTCAGCTCAAAGGTAACCTCC < 41bp 0.587863526807601 0.788755865075155 0.13321501 0.06380463 prediction 0.401784676535108 Functional Gain - PPP2R5A ENSG00000066027 CDS Human protein_coding chr1:212459622 chr1:212459623 synonymous SNV . 0 22 hm5C_associated_SNPs_129394 0 0 5 FMR1 POSTAR2 ENCODE chr1:212459547-212459632
64251 chr4 89574213 89574213 1 + C T UCEC 89574212 + 89574192 89574232 41 TGGCTGGGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTG TGGCTGGGGGATGAATAATGCTGGGCAGCTAGGGCTCAGTG < 41bp 0.619956177051877 0.820847501201047 0.76846206 0.61863995 prediction 0.401782648298341 Functional Gain - HERC3 ENSG00000138641 CDS Human protein_coding chr4:89574212 chr4:89574213 synonymous SNV . 0 22 hm5C_associated_SNPs_129395 0 0 2 FUS POSTAR2 DRA001158,DRS012384 chr4:89574204-89574241
64251 chr11 70281284 70281284 1 + C A rs192809533 70281283 + 70281263 70281303 41 CAGTAGGGCCCCCAGCCCCCCCCCGGAGCTGCGCCCTGGAT CAGTAGGGCCCCCAGCCCCCCACCGGAGCTGCGCCCTGGAT < 41bp 0.443983599026021 0.700885001883716 0.16759858 0.22883105 prediction 0.401770003767432 Functional Gain - CTTN ENSG00000085733 UTR3 Human protein_coding chr11:70281283 chr11:70281284 . . 0 22 hm5C_associated_SNPs_129397 0 0 3 TARDBP POSTAR2 DRA001158,DRS012386 chr11:70281266-70281311
64251 chr16 1825092 1825092 1 + C T LUAD 1825091 + 1825071 1825111 41 GATCTCCCCCGAGACCACCGCCCGGCCCCACCTGGCTGTCA GATCTCCCCCGAGACCACCGCTCGGCCCCACCTGGCTGTCA < 41bp 0.455861957685812 0.700879807501382 0.4259249 0.36576462 prediction 0.401759615002764 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825091 chr16:1825092 synonymous SNV . 0 22 hm5C_associated_SNPs_129399 0 0 2 PPIG POSTAR2 ENCODE chr16:1825058-1825100
64251 chr20 61451312 61451312 1 + C T UCEC 61451311 + 61451291 61451331 41 GACGAGATGGACCCCCTGGACCCAAGGGTGCCCCTGGGGAA GACGAGATGGACCCCCTGGACTCAAGGGTGCCCCTGGGGAA < 41bp 0.638544852327731 0.839413425013616 0.09907371 0.06073734 prediction 0.40173714537177 Functional Gain - COL9A3 ENSG00000092758 CDS Human protein_coding chr20:61451311 chr20:61451312 nonsynonymous SNV 0.994 1 22 hm5C_associated_SNPs_129405 0 0 11 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:61451286-61451314
64251 chr11 35684851 35684851 1 + C A UCEC 35684850 + 35684830 35684870 41 GGCCGAATACGTCCACGGCTCCCAGGCCTGGACCCCGCCAG GGCCGAATACGTCCACGGCTCACAGGCCTGGACCCCGCCAG < 41bp 0.6504954949959 0.851363465176954 0.3281404 0.50424916 prediction 0.401735940362107 Functional Gain - TRIM44 ENSG00000166326 CDS Human protein_coding chr11:35684850 chr11:35684851 synonymous SNV . 0 22 hm5C_associated_SNPs_129407 0 0 1 U2AF2 POSTAR2 GSE83923,CSM2221662 chr11:35684850-35684851
64251 chr1 160314553 160314553 1 + C A UCEC 160314552 + 160314532 160314572 41 GTGGAGAGGAAGATATATATCCCCTTAAATAAAACAGCTCC GTGGAGAGGAAGATATATATCACCTTAAATAAAACAGCTCC < 41bp 0.437970980397544 0.700855975559081 0.039461523 0.054193318 prediction 0.401711951118163 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160314552 chr1:160314553 nonsynonymous SNV 0.996 0 22 hm5C_associated_SNPs_129411 0 0 7 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:160314540-160314560
64251 chr17 47895285 47895285 1 + C T SKCM 47895284 + 47895264 47895304 41 CCTGGTATCATTCTCCATATCCTGAAGAATATGCACGGCTG CCTGGTATCATTCTCCATATCTTGAAGAATATGCACGGCTG < 41bp 0.441397247679979 0.700855434872867 0.03463319 0.04356292 prediction 0.401710869745734 Functional Gain - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47895284 chr17:47895285 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129412 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr17:47895235-47895291
64251 chr17 15928399 15928399 1 + T C LIHC 15928396 + 15928376 15928416 41 ACGCCTGTGCTCGCTACCTTCTGTTCTCCAAGCAGCCGTCA ACGCCTGTGCTCGCTACCTTCTGCTCTCCAAGCAGCCGTCA < 41bp 0.481766735525647 0.700843902673372 0.019704819 0.027236223 prediction 0.401687805346743 Functional Gain - TTC19 ENSG00000011295 CDS Human protein_coding chr17:15928396 chr17:15928399 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_129418 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr17:15928369-15928400
64251 chr8 17419558 17419558 1 + T C UCEC 17419556 + 17419536 17419576 41 CTCGCGCTGTTTCTTGTTCTCTTCGTTGCCATCGTTCTCAC CTCGCGCTGTTTCTTGTTCTCTCCGTTGCCATCGTTCTCAC < 41bp 0.685016782258473 0.885857989141317 0.13344783 0.10650727 prediction 0.401682413765688 Functional Gain - SLC7A2 ENSG00000003989 CDS Human protein_coding chr8:17419556 chr8:17419558 nonsynonymous SNV 0.001 1 23 hm5C_associated_SNPs_129424 0 0 1 CSTF2 POSTAR2 GSE37401,GSM917676 chr8:17419539-17419568
64251 chr7 75610852 75610852 1 + T A LIHC 75610850 + 75610830 75610870 41 CCCAGCTTGGAGGAGGACTTCATCACCTGGCGAGAGCAGTT CCCAGCTTGGAGGAGGACTTCAACACCTGGCGAGAGCAGTT < 41bp 0.530847171026751 0.731679775266628 0.10334262 0.1720064 prediction 0.401665208479754 Functional Gain - POR ENSG00000127948 CDS Human protein_coding chr7:75610850 chr7:75610852 nonsynonymous SNV 0.996 4 23 hm5C_associated_SNPs_129427 0 0 7 DDX24 POSTAR2 ENCODE chr7:75610846-75610922
64251 chr20 62373262 62373262 1 + C T rs145320298 62373261 + 62373241 62373281 41 GAAGGAGGCCCTGGTGCGGCCCCCAGGCAGCTACAGCAGCA GAAGGAGGCCCTGGTGCGGCCTCCAGGCAGCTACAGCAGCA < 41bp 0.648181200959807 0.849008606826043 0.082259566 0.9292581 prediction 0.401654811732472 Functional Gain - SLC2A4RG ENSG00000125520 CDS Human protein_coding chr20:62373261 chr20:62373262 synonymous SNV . 0 22 hm5C_associated_SNPs_129431 0 0 8 GRWD1 POSTAR2 ENCODE chr20:62373233-62373263
64251 chr4 151504899 151504899 1 + C T UCEC 151504898 + 151504878 151504918 41 CAGTTCGGGGAGGCGGAGAACCGCCTGCTGATGGGCGGCTG CAGTTCGGGGAGGCGGAGAACTGCCTGCTGATGGGCGGCTG < 41bp 0.468180935790477 0.70082736526343 0.54297847 0.46111542 prediction 0.401654730526859 Functional Gain - MAB21L2 ENSG00000181541 CDS Human protein_coding chr4:151504898 chr4:151504899 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_129432 0 0 1 EIF3A POSTAR2 GSE65004,GSM1585664 chr4:151504873-151504903
64251 chr11 3829808 3829808 1 + C G rs191164612 3829804 + 3829784 3829824 41 CCCGCCGTTCGCGCTCTGACCAGCCCGCAGAGCCAGCCCCC CCCGCCGTTCGCGCTCTGACCAGCGCGCAGAGCCAGCCCCC < 41bp 0.672036918953007 0.872859658608771 0.4963056 0.82139593 prediction 0.401645479311529 Functional Gain - PGAP2 ENSG00000148985 UTR5 Human protein_coding chr11:3829804 chr11:3829808 . . 0 25 hm5C_associated_SNPs_129433 0 0 1 DDX3X POSTAR2 ENCODE chr11:3829791-3829838
64251 chr16 29810040 29810040 1 + T G UCEC 29810038 + 29810018 29810058 41 CCATGGGCCCTTTCTGTCACCATGTCTTACCTAGAGATCTA CCATGGGCCCTTTCTGTCACCAGGTCTTACCTAGAGATCTA < 41bp 0.335470542001865 0.70081790242449 0.45393568 0.87889695 prediction 0.40163580484898 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29810038 chr16:29810040 nonsynonymous SNV 0.998 3 23 hm5C_associated_SNPs_129434 0 0 14 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:29810019-29810051
64251 chr16 1551467 1551467 1 + C T COAD 1551466 + 1551446 1551486 41 AGCTGCTGGCCTTGGCCTCCCCCCAGCCTGCGGGTGACGGC AGCTGCTGGCCTTGGCCTCCCTCCAGCCTGCGGGTGACGGC < 41bp 0.657685611628509 0.858496146854712 0.16079193 0.92005885 prediction 0.401621070452406 Functional Gain - TELO2 ENSG00000100726 CDS Human protein_coding chr16:1551466 chr16:1551467 nonsynonymous SNV 0.000 2 22 hm5C_associated_SNPs_129436 0 0 1 SF3B4 POSTAR2 ENCODE chr16:1551462-1551481
64251 chr14 104194169 104194169 1 + C T LUAD 104194168 + 104194148 104194188 41 GCGCATGTGCTTTGTGGACCCCGTGCGGCAGTGCGCGGAGT GCGCATGTGCTTTGTGGACCCTGTGCGGCAGTGCGCGGAGT < 41bp 0.560416401911062 0.76122132040598 0.13175926 0.12043089 prediction 0.401609836989836 Functional Gain - ZFYVE21 ENSG00000100711 CDS Human protein_coding chr14:104194168 chr14:104194169 synonymous SNV . 0 22 hm5C_associated_SNPs_129438 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:104194154-104194178
64251 chr8 99161052 99161052 1 + C T UCEC 99161051 + 99161031 99161071 41 CTTCCACTTTAGGATTTAAACCGGATGAGGAGTGAATTGCT CTTCCACTTTAGGATTTAAACTGGATGAGGAGTGAATTGCT < 41bp 0.642221973321933 0.843023816757794 0.4153821 0.29062155 prediction 0.401603686871724 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99161051 chr8:99161052 nonsynonymous SNV 1.000 2 22 hm5C_associated_SNPs_129441 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr8:99161043-99161087
64251 chr1 43241115 43241115 1 + T C rs115640157 43241113 + 43241093 43241133 41 AGGACCTGGCTGTCAACCTCCTTGTTGCCCCCACTGTTGCC AGGACCTGGCTGTCAACCTCCTCGTTGCCCCCACTGTTGCC < 41bp 0.45276266741776 0.700799037892412 0.2388893 0.20626095 prediction 0.401598075784824 Functional Gain - C1orf50 ENSG00000164008;ENSG00000164008 UTR5;UTR3 Human other chr1:43241113 chr1:43241115 . . 0 23 hm5C_associated_SNPs_129443 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr1:43241106-43241215
64251 chr19 1925012 1925012 1 + C T rs116454078 1925011 + 1924991 1925031 41 AGGCCAGGTCGGGAGCACAGCCGCTCCCCAAACCCAGCAAA AGGCCAGGTCGGGAGCACAGCTGCTCCCCAAACCCAGCAAA < 41bp 0.523355043596052 0.724151304476351 0.36884326 0.71984833 prediction 0.401592521760599 Functional Gain - SCAMP4 ENSG00000227500 UTR3 Human protein_coding chr19:1925011 chr19:1925012 . . 0 22 hm5C_associated_SNPs_129446 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1924930-1925015
64251 chr10 6262697 6262697 1 + C T UCEC 6262696 + 6262676 6262716 41 GTGCAGGACCACATCCAGAGCCGCATCGTGTACTACCTGAT GTGCAGGACCACATCCAGAGCTGCATCGTGTACTACCTGAT < 41bp 0.429275633873863 0.700795037121518 0.17099383 0.17465806 prediction 0.401590074243037 Functional Gain - PFKFB3 ENSG00000170525 CDS Human protein_coding chr10:6262696 chr10:6262697 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129449 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:6262685-6262706
64251 chr14 21464935 21464935 1 + T C rs11538171 21464932 + 21464912 21464952 41 GCTGCAGCCCACGCCAGCATCTGTTTCCACAGGGATTTGTA GCTGCAGCCCACGCCAGCATCTGCTTCCACAGGGATTTGTA < 41bp 0.55101761781108 0.75181236637148 0.159255 0.1751943 prediction 0.401589497120799 Functional Gain - METTL17 ENSG00000165792 CDS Human protein_coding chr14:21464932 chr14:21464935 nonsynonymous SNV 0.017 1 24 hm5C_associated_SNPs_129450 0 0 16 CPSF1 POSTAR2 GSE37401,GSM917672 chr14:21464920-21464940
64251 chr20 18549899 18549899 1 + A G UCEC 18549896 + 18549876 18549916 41 AAAGTAGACCAAAAGGATGGCTCAGCAAGTGAAGTACCCAG AAAGTAGACCAAAAGGATGGCTCGGCAAGTGAAGTACCCAG < 41bp 0.479680169411503 0.70079423417936 0.019975692 0.015260011 prediction 0.401588468358721 Functional Gain - SMIM26 ENSG00000232388 ncRNA_exonic Human protein_coding chr20:18549896 chr20:18549899 . . 0 24 hm5C_associated_SNPs_129451 0 0 17 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:18549867-18549968
64251 chr4 88902887 88902887 1 + A G GBM 88902884 + 88902864 88902904 41 ACAGTAGACACATATGATGGCCGAGGTGATAGTGTGGTTTA ACAGTAGACACATATGATGGCCGGGGTGATAGTGTGGTTTA < 41bp 0.478274710236002 0.700789312437214 0.23565766 0.70055586 prediction 0.401578624874428 Functional Gain - SPP1 ENSG00000118785 CDS Human protein_coding chr4:88902884 chr4:88902887 synonymous SNV . 0 24 hm5C_associated_SNPs_129452 0 0 4 GRWD1 POSTAR2 ENCODE chr4:88902885-88902948
64251 chr10 5960440 5960440 1 + A G LIHC 5960437 + 5960417 5960457 41 CACCCACGTCTTCTATCTCACGCAGGTAAGTGCGCACTCTG CACCCACGTCTTCTATCTCACGCGGGTAAGTGCGCACTCTG < 41bp 0.626792627200662 0.827581110227223 0.6698247 0.9085748 prediction 0.401576966053121 Functional Gain - FBXO18 ENSG00000134452 CDS Human protein_coding chr10:5960437 chr10:5960440 nonsynonymous SNV 0.932 3 24 hm5C_associated_SNPs_129453 0 0 2 PRPF8 POSTAR2 ENCODE chr10:5960430-5960479
64251 chr7 127338982 127338982 1 + C A STAD 127338978 + 127338958 127338998 41 CTGGTTGCAGAGGGCTTAGCCACCCGGAGAGAAGGCATGAG CTGGTTGCAGAGGGCTTAGCCACCAGGAGAGAAGGCATGAG < 41bp 0.286880861487107 0.700787272336301 0.40354687 0.46364716 prediction 0.401574544672602 Functional Gain - SND1 ENSG00000197157 CDS Human protein_coding chr7:127338978 chr7:127338982 synonymous SNV . 0 25 hm5C_associated_SNPs_129455 0 0 9 DDX24 POSTAR2 ENCODE chr7:127338943-127339003
64251 chr7 128485007 128485007 1 + C T UCEC 128485006 + 128484986 128485026 41 GCAAGGTGCGGGCCAGTGGACCGGGCCTGGAGCGCGGCAAG GCAAGGTGCGGGCCAGTGGACTGGGCCTGGAGCGCGGCAAG < 41bp 0.594759476454467 0.795537656385309 0.8890567 0.8752752 prediction 0.401556359861685 Functional Gain - FLNC ENSG00000128591 CDS Human protein_coding chr7:128485006 chr7:128485007 nonsynonymous SNV 0.398 5 22 hm5C_associated_SNPs_129460 0 0 6 FMR1 POSTAR2 ENCODE chr7:128484984-128485021
64251 chr8 95835714 95835714 1 + C G SKCM 95835713 + 95835693 95835733 41 ACCTCCAGCCGGCCCTGCACCCCGCCGCAGACCTGCTGGTT ACCTCCAGCCGGCCCTGCACCGCGCCGCAGACCTGCTGGTT < 41bp 0.389009928724872 0.700771375171673 0.2736075 0.41130966 prediction 0.401542750343347 Functional Gain - INTS8 ENSG00000164941 CDS Human protein_coding chr8:95835713 chr8:95835714 nonsynonymous SNV 0.981 1 22 hm5C_associated_SNPs_129462 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr8:95835698-95835736
64251 chr15 32929220 32929220 1 + C A LIHC 32929219 + 32929199 32929239 41 ATATGATGGAAGGTAACTTACCGAAGTGTGCAGCACATAGC ATATGATGGAAGGTAACTTACAGAAGTGTGCAGCACATAGC < 41bp 0.443081277769251 0.700768343808277 0.5086276 0.7269646 prediction 0.401536687616554 Functional Gain - ARHGAP11A ENSG00000198826 CDS Human protein_coding chr15:32929219 chr15:32929220 nonsynonymous SNV 0.000 0 22 hm5C_associated_SNPs_129464 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:32929162-32929236
64251 chr19 54695980 54695980 1 + C T SKCM 54695979 + 54695959 54695999 41 CCCACCAGGCCCCTCGTCTTCCCAAGCAGGACCCTCAAATG CCCACCAGGCCCCTCGTCTTCTCAAGCAGGACCCTCAAATG < 41bp 0.651940806532876 0.852691247936981 0.12827978 0.10730228 prediction 0.40150088280821 Functional Gain - TSEN34 ENSG00000170892 CDS Human protein_coding chr19:54695979 chr19:54695980 synonymous SNV . 0 22 hm5C_associated_SNPs_129476 0 0 2 BUD13 POSTAR2 ENCODE chr19:54695942-54695992
64251 chr20 30381782 30381782 1 + T C UCEC 30381780 + 30381760 30381800 41 TTGATTCTCGAGACAAAGAACGTCAGTTACAGAAGGAGAAG TTGATTCTCGAGACAAAGAACGCCAGTTACAGAAGGAGAAG < 41bp 0.396048184390772 0.700745020286879 0.35257325 0.70610416 prediction 0.401490040573759 Functional Gain - TPX2 ENSG00000088325 CDS Human protein_coding chr20:30381780 chr20:30381782 synonymous SNV . 0 23 hm5C_associated_SNPs_129478 0 0 17 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:30381722-30381818
64251 chr19 4651891 4651891 1 + T G LUSC 4651887 + 4651867 4651907 41 TGTCCCCCGCAGGCCATGGACACCTTCAGCACCAAGAGCCT TGTCCCCCGCAGGCCATGGACACCGTCAGCACCAAGAGCCT < 41bp 0.53726923118114 0.738012298049826 0.050873935 0.11716482 prediction 0.401486133737371 Functional Gain - TNFAIP8L1 ENSG00000185361 CDS Human protein_coding chr19:4651887 chr19:4651891 nonsynonymous SNV 0.970 3 25 hm5C_associated_SNPs_129479 0 0 1 DDX3X POSTAR2 ENCODE chr19:4651886-4652040
64251 chr6 132047328 132047328 1 + A G COAD 132047325 + 132047305 132047345 41 ATGCCCATGTGGAGTTCATACACAGTCCCCCAGTTGGTAAG ATGCCCATGTGGAGTTCATACACGGTCCCCCAGTTGGTAAG < 41bp 0.62126293279395 0.822005500432825 0.053397983 0.2517013 prediction 0.401485135277751 Functional Gain - ENPP3 ENSG00000154269 CDS Human protein_coding chr6:132047325 chr6:132047328 synonymous SNV . 0 24 hm5C_associated_SNPs_129480 0 0 2 UCHL5 POSTAR2 ENCODE chr6:132047304-132047332
64251 chr4 152020774 152020774 1 + C A rs191557929 152020770 + 152020750 152020790 41 GCCTAAGTTCTCGCGCGACTCCCACTTCCGCCCTTTTGGCT GCCTAAGTTCTCGCGCGACTCCCAATTCCGCCCTTTTGGCT < 41bp 0.361928463250572 0.700733789933027 0.05733344 0.1314787 prediction 0.401467579866054 Functional Gain - RPS3A ENSG00000145425 UTR5 Human protein_coding chr4:152020770 chr4:152020774 . . 0 25 hm5C_associated_SNPs_129483 0 0 11 EIF3B POSTAR2 GSE65004,GSM1585667 chr4:152020750-152020794
64251 chr16 5128839 5128839 1 + T C COAD 5128836 + 5128816 5128856 41 AGCGGGCTGGTGACGCGTCTCCGTGAGCGGCCAGCCCTGCT AGCGGGCTGGTGACGCGTCTCCGCGAGCGGCCAGCCCTGCT < 41bp 0.557488575132614 0.758219626002147 0.44306532 0.6004998 prediction 0.401462101739067 Functional Gain - ALG1 ENSG00000033011 CDS Human protein_coding chr16:5128836 chr16:5128839 synonymous SNV . 0 24 hm5C_associated_SNPs_129484 0 0 7 DDX3X POSTAR2 ENCODE chr16:5128815-5128855
64251 chr14 24113673 24113673 1 + T C COAD 24113670 + 24113650 24113690 41 GCTGCTGGGTCTCACTAGAACACTGGCATTGGAGCTGGCCC GCTGCTGGGTCTCACTAGAACACCGGCATTGGAGCTGGCCC < 41bp 0.577154892899184 0.777876871274558 0.0466139 0.039683104 prediction 0.401443956750747 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24113670 chr14:24113673 nonsynonymous SNV 0.003 4 24 hm5C_associated_SNPs_129487 0 0 5 GRWD1 POSTAR2 ENCODE chr14:24113650-24113697
64251 chr9 96259756 96259756 1 + C T READ 96259755 + 96259735 96259775 41 TTACGTTTGTTTTCTCAGGTCCGGGCCCACCAGCTGGTCTT TTACGTTTGTTTTCTCAGGTCTGGGCCCACCAGCTGGTCTT < 41bp 0.455239808435431 0.700721751391058 0.56704116 0.55915403 prediction 0.401443502782116 Functional Gain - FAM120A ENSG00000048828 CDS Human protein_coding chr9:96259755 chr9:96259756 nonsynonymous SNV 0.985 3 22 hm5C_associated_SNPs_129488 0 0 6 DDX24 POSTAR2 ENCODE chr9:96259752-96259761
64251 chr16 90021615 90021615 1 + C T STAD 90021614 + 90021594 90021634 41 CCCCCTGGGGAGCCGGAATTCCGCTGCCCTGAACGCGTGAT CCCCCTGGGGAGCCGGAATTCTGCTGCCCTGAACGCGTGAT < 41bp 0.630371429210168 0.831084847590419 0.14642933 0.10566291 prediction 0.401426836760502 Functional Gain - DEF8 ENSG00000140995 CDS Human protein_coding chr16:90021614 chr16:90021615 nonsynonymous SNV 0.004 0 22 hm5C_associated_SNPs_129494 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr16:90021610-90021632
64251 chr21 37442686 37442686 1 - G A rs191556963 37442687 - 37442667 37442707 41 CATACCCTTGAAGGCGATGCCCGCGTTGTTGACCAGCACGT CATACCCTTGAAGGCGATGCCTGCGTTGTTGACCAGCACGT < 41bp 0.462131963246352 0.70071289044971 0.0360685 0.017415345 prediction 0.401425780899419 Functional Gain - CBR1 ENSG00000159228 CDS Human protein_coding chr21:37442687 chr21:37442686 synonymous SNV . 0 22 hm5C_associated_SNPs_129495 0 0 1 LIN28B POSTAR2 GSE44616,GSM1087851 chr21:37442672-37442692
64251 chr16 90002290 90002290 1 + T C rs1135425 90002288 + 90002268 90002308 41 GTCTAAACCCCCGGAGCCATCTTGCTGCCGACACCCTGCTT GTCTAAACCCCCGGAGCCATCTCGCTGCCGACACCCTGCTT < 41bp 0.556458640301706 0.757164502568451 0.18436769 0.312742 prediction 0.40141172453349 Functional Gain - TUBB3 ENSG00000198211;ENSG00000258947 UTR3 Human other chr16:90002288 chr16:90002290 . . 0 23 hm5C_associated_SNPs_129499 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:90002268-90002293
64251 chr17 17700792 17700792 1 + C T rs35686634 17700791 + 17700771 17700811 41 GCTGGGCCTGGCCTCCCAGCCCCCGGAGGGCAGGCCCTGCC GCTGGGCCTGGCCTCCCAGCCTCCGGAGGGCAGGCCCTGCC < 41bp 0.44112163223708 0.700702820653532 0.14115426 0.386577 prediction 0.401405641307064 Functional Gain - RAI1 ENSG00000108557 CDS Human protein_coding chr17:17700791 chr17:17700792 synonymous SNV . 0 22 hm5C_associated_SNPs_129500 1 0 1 EIF3H POSTAR2 ENCODE chr17:17700764-17700808
64251 chr17 74382123 74382123 1 + C G UCEC 74382122 + 74382102 74382142 41 GCGTGCTGGTGCTGCTGAACCCGCGCGGCGGCAAGGGCAAG GCGTGCTGGTGCTGCTGAACCGGCGCGGCGGCAAGGGCAAG < 41bp 0.58580968288006 0.7865060778366 0.5437839 0.85264033 prediction 0.40139278991308 Functional Gain - SPHK1 ENSG00000176170 CDS Human protein_coding chr17:74382122 chr17:74382123 nonsynonymous SNV 0.642 4 22 hm5C_associated_SNPs_129503 0 0 4 DDX3X POSTAR2 ENCODE chr17:74382095-74382183
64251 chr19 41884359 41884359 1 + T C STAD 41884356 + 41884336 41884376 41 CCGAGTCCCTGAGGGGTTTGCAGTTCCTGTCACCGCCTCTT CCGAGTCCCTGAGGGGTTTGCAGCTCCTGTCACCGCCTCTT < 41bp 0.52069353873348 0.721385529555522 0.21791151 0.29215533 prediction 0.401383981644083 Functional Gain - TMEM91 ENSG00000142046;ENSG00000248098;ENSG00000255730 CDS Human other chr19:41884356 chr19:41884359 nonsynonymous SNV 0.415 1 24 hm5C_associated_SNPs_129508 0 0 3 TARDBP POSTAR2 DRA001158,DRS012385 chr19:41884333-41884374
64251 chr5 174937120 174937120 1 + C T LUAD 174937119 + 174937099 174937139 41 GCCTCTGTTTTAGGACTACGCCGGCTGTGCTGTTCTGGCAG GCCTCTGTTTTAGGACTACGCTGGCTGTGCTGTTCTGGCAG < 41bp 0.603653327280817 0.804343950379995 0.42342666 0.35607815 prediction 0.401381246198358 Functional Gain - SFXN1 ENSG00000164466 CDS Human protein_coding chr5:174937119 chr5:174937120 nonsynonymous SNV 0.957 3 22 hm5C_associated_SNPs_129509 0 0 21 FIP1L1 POSTAR2 GSE37401,GSM917675 chr5:174937100-174937120
64251 chr2 118582157 118582157 1 + C A UCEC 118582153 + 118582133 118582173 41 TATCTGTTTCAGCACGTAGACAGACTATGCTCTTTTCTGCC TATCTGTTTCAGCACGTAGACAGAATATGCTCTTTTCTGCC < 41bp 0.305376602413963 0.700683808934917 0.21804729 0.13421884 prediction 0.401367617869833 Functional Gain - DDX18 ENSG00000088205 CDS Human protein_coding chr2:118582153 chr2:118582157 nonsynonymous SNV 0.935 4 25 hm5C_associated_SNPs_129510 0 0 11 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:118582121-118582157
64251 chr11 65631344 65631344 1 + T G STAD 65631342 + 65631322 65631362 41 CTGGATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCCG CTGGATGACCTTTGCAGCAGCAGCATCGACGGCCGCTTCCG < 41bp 0.341266413750896 0.700679138783354 0.12995344 0.53196955 prediction 0.401358277566708 Functional Gain - MUS81 ENSG00000172732 CDS Human protein_coding chr11:65631342 chr11:65631344 nonsynonymous SNV 1.000 3 23 hm5C_associated_SNPs_129511 0 0 8 GEMIN5 POSTAR2 ENCODE chr11:65631344-65631428
64251 chr4 174169415 174169415 1 + C T SKCM 174169414 + 174169394 174169434 41 GATCCTCGGTAACTTTGAACCCAAAGAACCTGAGCCTCCTG GATCCTCGGTAACTTTGAACCTAAAGAACCTGAGCCTCCTG < 41bp 0.640319816901652 0.840992875442487 0.17615965 0.39585224 prediction 0.401346117081669 Functional Gain - GALNT7 ENSG00000109586 CDS Human protein_coding chr4:174169414 chr4:174169415 synonymous SNV . 0 22 hm5C_associated_SNPs_129514 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr4:174169391-174169421
64251 chr15 79189384 79189384 1 + C A UCEC 79189383 + 79189363 79189403 41 GCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCT GCGATTATGAAGTGGCTCCTCATGAGTACCATCGGAAAGCT < 41bp 0.621422039388551 0.822075518436385 0.051211983 0.08357543 prediction 0.401306958095668 Functional Gain - MORF4L1 ENSG00000185787 CDS Human protein_coding chr15:79189383 chr15:79189384 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129522 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr15:79189334-79189384
64251 chr4 184020506 184020506 1 + C A rs191448060 184020502 + 184020482 184020522 41 GGCACCTCCCGCGCGTGGTTCCGCCGCGCCCCGCGCCCTGC GGCACCTCCCGCGCGTGGTTCCGCAGCGCCCCGCGCCCTGC < 41bp 0.361609106084072 0.700647473200602 0.5593815 0.7680825 prediction 0.401294946401204 Functional Gain - WWC2 ENSG00000151718 UTR5 Human protein_coding chr4:184020502 chr4:184020506 . . 0 25 hm5C_associated_SNPs_129524 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr4:184020483-184020521
64251 chr3 52526307 52526307 1 + C A KIRP 52526306 + 52526286 52526326 41 GATGACGTGCAAGGTCATGACCTCATGGGCAGTGTCACCCT GATGACGTGCAAGGTCATGACATCATGGGCAGTGTCACCCT < 41bp 0.447731482238374 0.700646504293344 0.026579648 0.15178713 prediction 0.401293008586688 Functional Gain - NISCH ENSG00000010322 CDS Human protein_coding chr3:52526306 chr3:52526307 nonsynonymous SNV 0.987 3 22 hm5C_associated_SNPs_129526 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:52526304-52526349
64251 chr6 90539723 90539723 1 + C G rs367700022 90539719 + 90539699 90539739 41 AGGCTGCATGGCGCGGTAGTCCCCCGAGTGGAGGTCGGCTG AGGCTGCATGGCGCGGTAGTCCCCGGAGTGGAGGTCGGCTG < 41bp 0.432865133146767 0.700645156125257 0.311065 0.7539909 prediction 0.401290312250514 Functional Gain - CASP8AP2 ENSG00000118412 ncRNA_exonic Human protein_coding chr6:90539719 chr6:90539723 . . 0 25 hm5C_associated_SNPs_129527 0 0 10 TARDBP POSTAR2 DRA001158,DRS012386 chr6:90539698-90539761
64251 chr11 64938874 64938874 1 + C T SKCM 64938873 + 64938853 64938893 41 ACTTCCCCTGTAGTTACCACCCAGGTAGAGCTGGGGGGCTG ACTTCCCCTGTAGTTACCACCTAGGTAGAGCTGGGGGGCTG < 41bp 0.607518234640691 0.808152506048779 0.10778901 0.13992652 prediction 0.401268542816176 Functional Gain - SPDYC ENSG00000204710 CDS Human protein_coding chr11:64938873 chr11:64938874 stopgain 0.009 0 22 hm5C_associated_SNPs_129530 0 0 2 DDX3X POSTAR2 ENCODE chr11:64938796-64938927
64251 chr17 35825613 35825613 1 + T G BRCA 35825610 + 35825590 35825630 41 ATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCA ATTTGCAAGAATTGTGGGGCCAGGGGAACATGACAAATTCA < 41bp 0.299797506661913 0.700626707793661 0.7396881 0.89668584 prediction 0.401253415587322 Functional Gain - TADA2A ENSG00000108264 CDS Human other chr17:35825610 chr17:35825613 nonsynonymous SNV 0.996 0 24 hm5C_associated_SNPs_129536 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr17:35825580-35825623
64251 chr22 19502506 19502506 1 + C A UCEC 19502502 + 19502482 19502522 41 CCGCAGGGCACTCCAGATGTCATGCTGTTCTCTAGGCCGGC CCGCAGGGCACTCCAGATGTCATGATGTTCTCTAGGCCGGC < 41bp 0.287501213539255 0.700617739860405 0.28516477 0.3601489 prediction 0.401235479720811 Functional Gain - CDC45 ENSG00000093009 CDS Human protein_coding chr22:19502502 chr22:19502506 nonsynonymous SNV 0.398 1 25 hm5C_associated_SNPs_129540 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:19502502-19502527
64251 chr2 201438338 201438338 1 + C T SKCM 201438337 + 201438317 201438357 41 AGACCTCCATAGATCCTTCTCCAGAGAGCCATGAAGTAATG AGACCTCCATAGATCCTTCTCTAGAGAGCCATGAAGTAATG < 41bp 0.45666425236438 0.700614724954847 0.17459556 0.02891314 prediction 0.401229449909693 Functional Gain - SGO2 ENSG00000163535 CDS Human protein_coding chr2:201438337 chr2:201438338 nonsynonymous SNV 0.037 0 22 hm5C_associated_SNPs_129542 0 0 1 LARP4 POSTAR2 ENCODE chr2:201438282-201438382
64251 chr11 60695323 60695323 1 + C G HNSC 60695319 + 60695299 60695339 41 GCCGGCACTGCTCACCAAGCCTGCCGCTTCCAGGTGAGTAG GCCGGCACTGCTCACCAAGCCTGCGGCTTCCAGGTGAGTAG < 41bp 0.406909587282788 0.700609721499288 0.048529148 0.1732038 prediction 0.401219442998577 Functional Gain - TMEM132A ENSG00000006118 CDS Human protein_coding chr11:60695319 chr11:60695323 nonsynonymous SNV 0.871 3 25 hm5C_associated_SNPs_129543 0 0 1 PRPF8 POSTAR2 ENCODE chr11:60695306-60695371
64251 chr19 9273994 9273994 1 + C A rs182438047 9273990 + 9273970 9274010 41 GCAGAAAGCTCACAGCGACCCTGGCCTCCCCTGTGGCCTCT GCAGAAAGCTCACAGCGACCCTGGACTCCCCTGTGGCCTCT < 41bp 0.707690018585604 0.90828866753751 0.11831102 0.3699553 prediction 0.401197297903812 Functional Gain - ZNF317 ENSG00000130803 UTR3 Human protein_coding chr19:9273990 chr19:9273994 . . 0 25 hm5C_associated_SNPs_129548 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:9273984-9274027
64251 chr17 40844621 40844621 1 + C T BLCA 40844620 + 40844600 40844640 41 GATGACGAGTGGCACCTGGTCCGGGCTGAAATCAACGTGAA GATGACGAGTGGCACCTGGTCTGGGCTGAAATCAACGTGAA < 41bp 0.629161487285596 0.829754618741133 0.62649673 0.41437674 prediction 0.401186262911074 Functional Gain - CNTNAP1 ENSG00000108797 CDS Human protein_coding chr17:40844620 chr17:40844621 nonsynonymous SNV 1.000 1 22 hm5C_associated_SNPs_129550 0 0 2 GRWD1 POSTAR2 ENCODE chr17:40844593-40844653
64251 chr9 133967295 133967295 1 + C A rs710074 133967291 + 133967271 133967311 41 CCGGAGCCGGCTGCTGTGAACTCGCCCCCGTGTGGATAGTC CCGGAGCCGGCTGCTGTGAACTCGACCCCGTGTGGATAGTC < 41bp 0.29710563049289 0.700589948604968 0.15385082 0.15387785 prediction 0.401179897209937 Functional Gain - LAMC3 ENSG00000050555 UTR3 Human protein_coding chr9:133967291 chr9:133967295 . . 0 25 hm5C_associated_SNPs_129552 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr9:133967222-133967299
64251 chr7 100732713 100732713 1 + C T UCEC 100732712 + 100732692 100732732 41 ACAAGGTGGTGATCCTGGACCCGAAGGGGTCCCTCCTTGGA ACAAGGTGGTGATCCTGGACCTGAAGGGGTCCCTCCTTGGA < 41bp 0.451836536078593 0.700589649445811 0.21025297 0.22895655 prediction 0.401179298891622 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100732712 chr7:100732713 nonsynonymous SNV 0.879 3 22 hm5C_associated_SNPs_129553 0 0 2 XPO5 POSTAR2 ENCODE chr7:100732679-100732761
64251 chr20 58519319 58519319 1 + T G STAD 58519315 + 58519295 58519335 41 TTCGGAAAGAATTCCCATTCCTCCTTCTCCCCTCACACCTC TTCGGAAAGAATTCCCATTCCTCCGTCTCCCCTCACACCTC < 41bp 0.515890590367416 0.716478448560316 0.1070472 0.11688757 prediction 0.401175716385799 Functional Gain - FAM217B ENSG00000196227 CDS Human protein_coding chr20:58519315 chr20:58519319 synonymous SNV . 0 25 hm5C_associated_SNPs_129554 0 0 5 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr20:58519293-58519337
64251 chr4 38691482 38691482 1 + C T UCEC 38691481 + 38691461 38691501 41 TAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAG TAATGAACTCAGTGTCCCCCCTGCAAGCATTGTTGCAAGAG < 41bp 0.430177954629426 0.70056933749353 0.03674242 0.07865089 prediction 0.401138674987059 Functional Gain - KLF3 ENSG00000109787 CDS Human protein_coding chr4:38691481 chr4:38691482 nonsynonymous SNV 0.996 1 22 hm5C_associated_SNPs_129562 0 0 2 RBM15 POSTAR2 ENCODE chr4:38691467-38691645
64251 chr3 128621412 128621412 1 + T C LIHC 128621410 + 128621390 128621430 41 CTGCAGGTGGCCATGAACATCCTCAACAGCGGCCGGTTCAG CTGCAGGTGGCCATGAACATCCCCAACAGCGGCCGGTTCAG < 41bp 0.405504829007947 0.70055685768281 0.06048873 0.16018033 prediction 0.401113715365621 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128621410 chr3:128621412 nonsynonymous SNV 1.000 4 23 hm5C_associated_SNPs_129565 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:128621404-128621430
64251 chr16 57220297 57220297 1 + C A rs532577746 57220293 + 57220273 57220313 41 GTCCATCTTTGCCGTTCTCTCGGACCTGTCACAAAGGAGTC GTCCATCTTTGCCGTTCTCTCGGAACTGTCACAAAGGAGTC < 41bp 0.724914688824427 0.925464889667156 0.90492606 0.8825245 prediction 0.401100401685457 Functional Gain - RSPRY1 ENSG00000159579 UTR5 Human protein_coding chr16:57220293 chr16:57220297 . . 0 25 hm5C_associated_SNPs_129569 0 0 7 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:57220261-57220299
64251 chr17 14204871 14204871 1 + C G BLCA 14204868 + 14204848 14204888 41 CTGAGTGGCGGCAGATCTTGCCTCGATGTCCCCGGCCGGCT CTGAGTGGCGGCAGATCTTGCCTGGATGTCCCCGGCCGGCT < 41bp 0.507597360703587 0.708143672828623 0.8512851 0.34676272 prediction 0.401092624250073 Functional Gain - HS3ST3B1 ENSG00000125430 CDS Human protein_coding chr17:14204868 chr17:14204871 synonymous SNV . 0 24 hm5C_associated_SNPs_129571 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr17:14204860-14204880
64251 chr22 37962643 37962643 1 + C T LUSC 37962642 + 37962622 37962662 41 TGCGGAGGGTGGGGGCGCCCCCCCGGAGGATGGCATCTCCC TGCGGAGGGTGGGGGCGCCCCTCCGGAGGATGGCATCTCCC < 41bp 0.633714347379551 0.834257598636307 0.28375202 0.777473 prediction 0.401086502513512 Functional Gain - CDC42EP1 ENSG00000128283 CDS Human protein_coding chr22:37962642 chr22:37962643 nonsynonymous SNV 0.157 1 22 hm5C_associated_SNPs_129572 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr22:37962640-37962660
64251 chr17 47886508 47886508 1 + A G rs141200367 47886505 + 47886485 47886525 41 GAGCACAGAGCCGGGATAAGCAGATAGAAGAAAGGATGCTG GAGCACAGAGCCGGGATAAGCAGGTAGAAGAAAGGATGCTG < 41bp 0.595866878162621 0.796408778667145 0.88996637 0.9024914 prediction 0.401083801009049 Functional Gain - KAT7 ENSG00000136504 CDS Human protein_coding chr17:47886505 chr17:47886508 nonsynonymous SNV 1.000 0 24 hm5C_associated_SNPs_129573 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:47886506-47886541
64251 chr3 142503601 142503601 1 + T A COAD 142503597 + 142503577 142503617 41 TGAACACTGTTTGGTTTGGACAGATGTCGGGTTACCGACGC TGAACACTGTTTGGTTTGGACAGAAGTCGGGTTACCGACGC < 41bp 0.699187415911553 0.899728433967808 0.8258285 0.767816 prediction 0.40108203611251 Functional Gain - TRPC1 ENSG00000144935 CDS Human protein_coding chr3:142503597 chr3:142503601 nonsynonymous SNV 1.000 2 25 hm5C_associated_SNPs_129574 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:142503575-142503612
64251 chr19 58797098 58797098 1 + C T rs149035373 58797097 + 58797077 58797117 41 TTTCAGGAACCAGTGACCTTCCGGGATGTGGCTGTGGACTT TTTCAGGAACCAGTGACCTTCTGGGATGTGGCTGTGGACTT < 41bp 0.611847894544122 0.812388579571472 0.58280504 0.39967683 prediction 0.4010813700547 Functional Gain - ZNF8 ENSG00000083842;ENSG00000273439 CDS Human other chr19:58797097 chr19:58797098 nonsynonymous SNV 0.988 0 22 hm5C_associated_SNPs_129575 0 0 2 FMR1 POSTAR2 GSE39682,GSM977616 chr19:58797091-58797110
64251 chr18 31323064 31323064 1 + T C DLBC 31323061 + 31323041 31323081 41 GCTGCTGCAGCGAGCATTGTCTCTGGAGCCATGGGAAGTCC GCTGCTGCAGCGAGCATTGTCTCCGGAGCCATGGGAAGTCC < 41bp 0.597788233618469 0.798328442135286 0.16842365 0.4697713 prediction 0.401080417033634 Functional Gain - ASXL3 ENSG00000141431 CDS Human protein_coding chr18:31323061 chr18:31323064 synonymous SNV . 0 24 hm5C_associated_SNPs_129576 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr18:31323057-31323095
64251 chr5 98129390 98129390 1 + C G LGG 98129389 + 98129369 98129409 41 CCAGCAGTGGCAATGGGACTCCCCGTGGAGGCAGTGATTTG CCAGCAGTGGCAATGGGACTCGCCGTGGAGGCAGTGATTTG < 41bp 0.384068581526231 0.700537782214413 0.053384125 0.09734577 prediction 0.401075564428827 Functional Gain - RGMB ENSG00000174136 CDS Human protein_coding chr5:98129389 chr5:98129390 nonsynonymous SNV 0.012 2 22 hm5C_associated_SNPs_129577 0 0 6 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr5:98129350-98129392
64251 chr6 7189439 7189439 1 + A G BRCA 7189436 + 7189416 7189456 41 GACCACTCATGCAGCATCTGCGGAAAGTCACTGAGCTCGGC GACCACTCATGCAGCATCTGCGGGAAGTCACTGAGCTCGGC < 41bp 0.463379862195166 0.700527644405736 0.5517626 0.9010452 prediction 0.401055288811472 Functional Gain - RREB1 ENSG00000124782 CDS Human protein_coding chr6:7189436 chr6:7189439 synonymous SNV . 0 24 hm5C_associated_SNPs_129582 0 0 10 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:7189429-7189461
64251 chr8 99139913 99139913 1 + A G STAD 99139910 + 99139890 99139930 41 AGTGAATGAGCAGTCTTCCTCCAAAGGGATGTTTAGAAAAA AGTGAATGAGCAGTCTTCCTCCAGAGGGATGTTTAGAAAAA < 41bp 0.449703215957995 0.700523750535749 0.18005371 0.88562346 prediction 0.401047501071498 Functional Gain - POP1 ENSG00000104356 CDS Human protein_coding chr8:99139910 chr8:99139913 nonsynonymous SNV 0.766 0 24 hm5C_associated_SNPs_129585 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:99139907-99139945
64251 chr19 19606611 19606611 1 + C T UCEC 19606610 + 19606590 19606630 41 GTCATACCCCCGCCCCTGGTCCGAGGTGGGCAGCAGGCGTC GTCATACCCCCGCCCCTGGTCTGAGGTGGGCAGCAGGCGTC < 41bp 0.624469544896875 0.824989809820702 0.87180823 0.40093875 prediction 0.401040529847653 Functional Gain - GATAD2A ENSG00000167491 CDS Human protein_coding chr19:19606610 chr19:19606611 stopgain 0.917 1 22 hm5C_associated_SNPs_129587 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:19606604-19606628
64251 chr1 161136647 161136647 1 + A G UCEC 161136644 + 161136624 161136664 41 CCCCAGGTTTCCGCATGGGCCGGACCGTGGTCGTGCTGGGC CCCCAGGTTTCCGCATGGGCCGGGCCGTGGTCGTGCTGGGC < 41bp 0.462332764611746 0.70051936584737 0.10797125 0.35651138 prediction 0.401038731694741 Functional Gain - PPOX ENSG00000143224 CDS Human protein_coding chr1:161136644 chr1:161136647 nonsynonymous SNV 0.995 4 24 hm5C_associated_SNPs_129591 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:161136647-161136648
64251 chrX 100646519 100646519 1 + T C STAD 100646516 + 100646496 100646536 41 ACCAACCCCATAAAGTGACACAGTACAAGAAGGGCAAGGAT ACCAACCCCATAAAGTGACACAGCACAAGAAGGGCAAGGAT < 41bp 0.473987760938635 0.700519055805052 0.38838184 0.084875256 prediction 0.401038111610105 Functional Gain - RPL36A;RPL36A-HNRNPH2 ENSG00000241343;ENSG00000257529 CDS Human other chrX:100646516 chrX:100646519 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_129592 0 0 6 IGF2BP1 POSTAR2 ENCODE chrX:100646495-100646549
64251 chr17 900402 900402 1 + A G rs76343685 900399 + 900379 900419 41 TGTCATGGCGGCGGCCGCCCCCAATGCCGGAGGCTCGGCCC TGTCATGGCGGCGGCCGCCCCCAGTGCCGGAGGCTCGGCCC < 41bp 0.635312752834035 0.835828323882393 0.11239636 0.33791655 prediction 0.401031142096718 Functional Gain - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900399 chr17:900402 nonsynonymous SNV 0.000 0 24 hm5C_associated_SNPs_129594 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819211 chr17:900402-900403
64251 chr1 181058150 181058150 1 + C A LIHC 181058146 + 181058126 181058166 41 CTGCATAAGAACCTCCTGGTCTCGCTGGTGCTGCGCAGCGC CTGCATAAGAACCTCCTGGTCTCGATGGTGCTGCGCAGCGC < 41bp 0.740239704943309 0.940754363534969 0.3337806 0.88994765 prediction 0.40102931718332 Functional Gain - IER5 ENSG00000162783 CDS Human protein_coding chr1:181058146 chr1:181058150 nonsynonymous SNV 0.992 3 25 hm5C_associated_SNPs_129595 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819213 chr1:181058120-181058160
64251 chr17 65688810 65688810 1 + C T COAD 65688809 + 65688789 65688829 41 CCCCTGCTGCCTTCTTCCGTCCGCAGTGCGCCTTCTAGTGC CCCCTGCTGCCTTCTTCCGTCTGCAGTGCGCCTTCTAGTGC < 41bp 0.629533501525752 0.830044981415725 0.11525962 0.05444166 prediction 0.401022959779946 Functional Gain - PITPNC1 ENSG00000154217 CDS Human protein_coding chr17:65688809 chr17:65688810 nonsynonymous SNV 0.391 2 22 hm5C_associated_SNPs_129597 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:65688785-65688825
64251 chr2 176960260 176960260 1 + A G rs112259280 176960257 + 176960237 176960277 41 GCAATCAGTAGAGTGACCCGCGGATGGCATAAATGCACCTC GCAATCAGTAGAGTGACCCGCGGGTGGCATAAATGCACCTC < 41bp 0.561165194317946 0.761676634016229 0.8792819 0.9083855 prediction 0.401022879396565 Functional Gain - HOXD13 ENSG00000128714 UTR3 Human protein_coding chr2:176960257 chr2:176960260 . . 0 24 hm5C_associated_SNPs_129598 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012389 chr2:176960224-176960265
64251 chr9 68413602 68413602 1 + A G KIRP 68413599 + 68413579 68413619 41 AGGAAAGGTTGTGCCTTTTGCTGAAACTCTGGGGTTGACAG AGGAAAGGTTGTGCCTTTTGCTGGAACTCTGGGGTTGACAG < 41bp 0.569558090183844 0.770067665618204 0.44102135 0.6728387 prediction 0.40101915086872 Functional Gain - LINC00537 ENSG00000232815 ncRNA_exonic Human unprocessed_pseudogene chr9:68413599 chr9:68413602 . . 0 24 hm5C_associated_SNPs_129599 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr9:68413588-68413626
64251 chr19 1248612 1248612 1 + C G rs557216016 1248609 + 1248589 1248629 41 CCCGGCCAGCGCGCATTCGGCCCCGGACGAAGGTACTCGCA CCCGGCCAGCGCGCATTCGGCCCGGGACGAAGGTACTCGCA < 41bp 0.496920573921743 0.700508702935666 0.32445592 0.62377757 prediction 0.401017405871333 Functional Gain - MIDN ENSG00000167470 UTR5 Human protein_coding chr19:1248609 chr19:1248612 . . 0 24 hm5C_associated_SNPs_129600 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:1248600-1248620
64251 chr17 902085 902085 1 + C A UCEC 902084 + 902064 902104 41 ATACCAACGTGGGCTTTGACCCTAAGGATCCTTACCGTACA ATACCAACGTGGGCTTTGACCATAAGGATCCTTACCGTACA < 41bp 0.426027689880224 0.700508408825122 0.07993108 0.260121 prediction 0.401016817650244 Functional Gain - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:902084 chr17:902085 nonsynonymous SNV 0.993 4 22 hm5C_associated_SNPs_129601 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:902072-902108
64251 chr3 186791960 186791960 1 + C T GBM 186791959 + 186791939 186791979 41 TTTTTCAGTGGTACCAGAATCCGGATTATAATTTCTTTAAC TTTTTCAGTGGTACCAGAATCTGGATTATAATTTCTTTAAC < 41bp 0.635926785023353 0.836431253266101 0.8065517 0.6288841 prediction 0.401008936485496 Functional Gain - ST6GAL1 ENSG00000073849 CDS Human protein_coding chr3:186791959 chr3:186791960 nonsynonymous SNV 0.415 4 22 hm5C_associated_SNPs_129605 0 0 5 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:186791950-186791988
64251 chr1 62908936 62908936 1 + A G LUAD 62908933 + 62908913 62908953 41 GGCTAGTTTTCTCTTAAATCCAGAGAAATATACTGATGAAC GGCTAGTTTTCTCTTAAATCCAGGGAAATATACTGATGAAC < 41bp 0.455338179292464 0.700493463821101 0.46222097 0.8977424 prediction 0.400986927642203 Functional Gain - USP1 ENSG00000162607 CDS Human protein_coding chr1:62908933 chr1:62908936 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_129609 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:62908833-62908981
64251 chr18 60241754 60241754 1 + A G UCEC 60241751 + 60241731 60241771 41 CCGCTTTGCATCTTACAGTTCAGAGGCTAAAGTTGCCACCA CCGCTTTGCATCTTACAGTTCAGGGGCTAAAGTTGCCACCA < 41bp 0.44485183397277 0.700488989711358 0.8911439 0.9362359 prediction 0.400977979422716 Functional Gain - ZCCHC2 ENSG00000141664 CDS Human protein_coding chr18:60241751 chr18:60241754 nonsynonymous SNV 0.354 0 24 hm5C_associated_SNPs_129610 0 0 1 PCBP2 POSTAR2 ENCODE chr18:60241672-60241758
64251 chr3 100067690 100067690 1 + T C UCEC 100067687 + 100067667 100067707 41 CCAGGAGCTTTTAATCTGACCACTGGACCAGCCCATTGGGA CCAGGAGCTTTTAATCTGACCACCGGACCAGCCCATTGGGA < 41bp 0.542800857840031 0.743288139867333 0.21839494 0.1743755 prediction 0.400974564054605 Functional Gain - NIT2 ENSG00000114021 CDS Human protein_coding chr3:100067687 chr3:100067690 synonymous SNV . 0 24 hm5C_associated_SNPs_129611 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:100067689-100067714
64251 chr3 110912152 110912152 1 + C A rs145238359 110912151 + 110912131 110912171 41 AATCAAATGTGCTACCAAGACCGGAGCCCTGGCAAACATCA AATCAAATGTGCTACCAAGACAGGAGCCCTGGCAAACATCA < 41bp 0.630633801293962 0.831119735365327 0.054046094 0.10912755 prediction 0.400971868142731 Functional Gain - NECTIN3 ENSG00000177707 CDS Human protein_coding chr3:110912151 chr3:110912152 synonymous SNV . 0 22 hm5C_associated_SNPs_129612 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:110912134-110912167
64251 chr17 40690452 40690452 1 + C G rs200496310 40690451 + 40690431 40690471 41 GCGAATGGGCAACCTGCACACCTGGGATGGCCCCCTGCCCC GCGAATGGGCAACCTGCACACGTGGGATGGCCCCCTGCCCC < 41bp 0.701598402055431 0.902083442208863 0.8696756 0.94621986 prediction 0.400970080306863 Functional Gain - NAGLU ENSG00000108784 CDS Human protein_coding chr17:40690451 chr17:40690452 synonymous SNV . 0 22 hm5C_associated_SNPs_129613 0 0 1 SND1 POSTAR2 ENCODE chr17:40690449-40690468
64251 chr10 105202030 105202030 1 + C A LIHC 105202029 + 105202009 105202049 41 AAGGCAGAGAAGGAACTGTCCCGCATTGAGGAGGCGCTGAT AAGGCAGAGAAGGAACTGTCCAGCATTGAGGAGGCGCTGAT < 41bp 0.439877116092576 0.700478192585223 0.13344765 0.08980402 prediction 0.400956385170447 Functional Gain - PDCD11 ENSG00000148843 CDS Human protein_coding chr10:105202029 chr10:105202030 nonsynonymous SNV 0.990 3 22 hm5C_associated_SNPs_129616 0 0 2 UCHL5 POSTAR2 ENCODE chr10:105202001-105202075
64251 chr2 220379438 220379438 1 + C A LUAD 220379437 + 220379417 220379457 41 GCTCTGGCCAGTCCCAGCAGCCGGGGACAGATGCCGATCGA GCTCTGGCCAGTCCCAGCAGCAGGGGACAGATGCCGATCGA < 41bp 0.654198394891565 0.854664514378828 0.92148405 0.9368388 prediction 0.400932238974526 Functional Gain - ASIC4 ENSG00000072182 CDS Human protein_coding chr2:220379437 chr2:220379438 synonymous SNV . 0 22 hm5C_associated_SNPs_129625 0 0 3 AKAP8L POSTAR2 ENCODE chr2:220379393-220379442
64251 chr20 42086678 42086678 1 + C T STAD 42086677 + 42086657 42086697 41 CCCCGCCCGCCACGGACATGCCGCGCGTCTACATAGGACGC CCCCGCCCGCCACGGACATGCTGCGCGTCTACATAGGACGC < 41bp 0.56113513362024 0.761601026862216 0.03377086 0.039093316 prediction 0.400931786483953 Functional Gain - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42086677 chr20:42086678 nonsynonymous SNV 0.998 2 22 hm5C_associated_SNPs_129626 0 0 10 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:42086673-42086716
64251 chrX 38664669 38664669 1 + T C LUSC 38664666 + 38664646 38664686 41 CCACCTGCGCGGGCTGCACACTGTGCTCTCGAAACTCACGC CCACCTGCGCGGGCTGCACACTGCGCTCTCGAAACTCACGC < 41bp 0.572925212834216 0.773389535792891 0.04179436 0.03911695 prediction 0.400928645917351 Functional Gain - MID1IP1 ENSG00000165175 CDS Human protein_coding chrX:38664666 chrX:38664669 nonsynonymous SNV 1.000 4 24 hm5C_associated_SNPs_129627 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chrX:38664584-38664710
64251 chr22 35689038 35689038 1 + T C COAD 35689035 + 35689015 35689055 41 GTGCTTCTGGATTCCATTATCTGTGCCCTTGGCCCCTTGGC GTGCTTCTGGATTCCATTATCTGCGCCCTTGGCCCCTTGGC < 41bp 0.574714576671486 0.775177423821251 0.18730861 0.39882377 prediction 0.400925694299531 Functional Gain - HMGXB4 ENSG00000100281 CDS Human protein_coding chr22:35689035 chr22:35689038 synonymous SNV . 0 24 hm5C_associated_SNPs_129628 0 0 12 FMR1 POSTAR2 GSE39682,GSM977616 chr22:35688982-35689055
64251 chr1 161645052 161645052 1 + C T rs28651835 161645051 + 161645031 161645071 41 TGTGTGCCCCTCCCAGCTCTCCCAGGATACCCTGAGTGCAG TGTGTGCCCCTCCCAGCTCTCTCAGGATACCCTGAGTGCAG < 41bp 0.444841951899125 0.700458137628134 0.24868825 0.006698936 prediction 0.400916275256267 Functional Gain - FCGR2B ENSG00000072694 CDS Human protein_coding chr1:161645051 chr1:161645052 nonsynonymous SNV 0.236 0 22 hm5C_associated_SNPs_129630 0 0 1 SND1 POSTAR2 ENCODE chr1:161645046-161645105
64251 chr1 179271879 179271879 1 + T C HNSC 179271877 + 179271857 179271897 41 TGTCAAAGTCCAGGGAAAATCCTGAGGAAGATGAAGACCAG TGTCAAAGTCCAGGGAAAATCCCGAGGAAGATGAAGACCAG < 41bp 0.669451936077249 0.869909060988932 0.24871051 0.43648806 prediction 0.400914249823365 Functional Gain - SOAT1 ENSG00000057252 CDS Human protein_coding chr1:179271877 chr1:179271879 synonymous SNV . 0 23 hm5C_associated_SNPs_129631 0 0 7 DDX3X POSTAR2 ENCODE chr1:179271811-179271886
64251 chr22 24125852 24125852 1 + A G COAD 24125849 + 24125829 24125869 41 TGGGACTGAGCCCATGTCTCCTCAGGGGGATGGGGTGGGGT TGGGACTGAGCCCATGTCTCCTCGGGGGGATGGGGTGGGGT < 41bp 0.627447425177606 0.827897487681527 0.2691641 0.66858125 prediction 0.400900125007841 Functional Gain - MMP11 ENSG00000267954 CDS Human other chr22:24125849 chr22:24125852 synonymous SNV . 0 24 hm5C_associated_SNPs_129634 0 0 1 LARP4 POSTAR2 ENCODE chr22:24125793-24125886
64251 chr10 89692996 89692996 1 + C G UCEC 89692995 + 89692975 89693015 41 TTTCTATGGGGAAGTAAGGACCAGAGACAAAAAGGTAAGTT TTTCTATGGGGAAGTAAGGACGAGAGACAAAAAGGTAAGTT < 41bp 0.396825711432894 0.700449354234809 0.34865016 0.5921411 prediction 0.400898708469618 Functional Gain - PTEN ENSG00000171862 CDS Human protein_coding chr10:89692995 chr10:89692996 synonymous SNV . 0 22 hm5C_associated_SNPs_129635 0 0 2 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:89692993-89693031
64251 chr7 1132671 1132671 1 + C G rs4266553 1132667 + 1132647 1132687 41 CCTGGGGCTGCTTAGGAAACCTCACGACTGGTCACCTTGCA CCTGGGGCTGCTTAGGAAACCTCAGGACTGGTCACCTTGCA < 41bp 0.397408652384961 0.700445814631876 0.19725275 0.42426044 prediction 0.400891629263752 Functional Gain - GPER1 ENSG00000164850 UTR3 Human protein_coding chr7:1132667 chr7:1132671 . 0.000 0 25 hm5C_associated_SNPs_129638 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr7:1132633-1132698
64251 chr17 17206716 17206716 1 + C G rs111471616 17206712 + 17206692 17206732 41 GGGGCCGGTACTTGCGCGCCCGCACCCCGCGCTCCCCGCCC GGGGCCGGTACTTGCGCGCCCGCAGCCCGCGCTCCCCGCCC < 41bp 0.66122000232412 0.861660867465133 0.1733689 0.2915385 prediction 0.400881730282026 Functional Gain - NT5M ENSG00000205309 UTR5 Human protein_coding chr17:17206712 chr17:17206716 . . 0 25 hm5C_associated_SNPs_129640 0 0 1 GEMIN5 POSTAR2 ENCODE chr17:17206682-17206788
64251 chr11 120099802 120099802 1 + T G SKCM 120099800 + 120099780 120099820 41 AGCTACAGCTTCGACTTCTACGTGCCCCAGAGGCAGCTGTG AGCTACAGCTTCGACTTCTACGGGCCCCAGAGGCAGCTGTG < 41bp 0.354880018224508 0.700425694732786 0.19659323 0.54531825 prediction 0.400851389465573 Functional Gain - OAF ENSG00000184232 CDS Human protein_coding chr11:120099800 chr11:120099802 nonsynonymous SNV 0.839 4 23 hm5C_associated_SNPs_129647 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:120099783-120099829
64251 chr8 48511643 48511643 1 + T C SKCM 48511641 + 48511621 48511661 41 GGAAAGCCAGGGAGCTGCCTCGTGGCCAGGAGCTGGAGTCC GGAAAGCCAGGGAGCTGCCTCGCGGCCAGGAGCTGGAGTCC < 41bp 0.462573258378956 0.700424881610842 0.48422375 0.71964693 prediction 0.400849763221685 Functional Gain - SPIDR ENSG00000164808 CDS Human protein_coding chr8:48511641 chr8:48511643 nonsynonymous SNV 0.006 1 23 hm5C_associated_SNPs_129650 0 0 2 DDX24 POSTAR2 ENCODE chr8:48511594-48511717
64251 chr7 2415160 2415160 1 + A G SARC 2415157 + 2415137 2415177 41 CCTCTGTGTCCTGGTGGAGCCATAAGGTGCAGGCCTGTGGG CCTCTGTGTCCTGGTGGAGCCATGAGGTGCAGGCCTGTGGG < 41bp 0.453778583027877 0.700424770441377 0.406169 0.38972756 prediction 0.400849540882755 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2415157 chr7:2415160 nonsynonymous SNV 0.995 1 24 hm5C_associated_SNPs_129651 0 0 12 DDX24 POSTAR2 ENCODE chr7:2415122-2415167
64251 chr12 54422504 54422504 1 + C A rs144307645 54422500 + 54422480 54422520 41 GAGAATGTCGTGTTCAGTTCCAGCCGGGGGCCGTATGACTA GAGAATGTCGTGTTCAGTTCCAGCAGGGGGCCGTATGACTA < 41bp 0.409109205143426 0.700420270826857 0.15304625 0.2910181 prediction 0.400840541653713 Functional Gain - HOXC6 ENSG00000197757 CDS Human protein_coding chr12:54422500 chr12:54422504 synonymous SNV . 0 25 hm5C_associated_SNPs_129654 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr12:54422480-54422524
64251 chr10 7844255 7844255 1 + T C rs141298924 7844252 + 7844232 7844272 41 GACAGCATGAGTATCTATGACGATATTGATGCTGACGTGCT GACAGCATGAGTATCTATGACGACATTGATGCTGACGTGCT < 41bp 0.588796769986572 0.789216719073589 0.047427446 0.06498709 prediction 0.400839898174033 Functional Gain - ATP5C1 ENSG00000165629 CDS Human protein_coding chr10:7844252 chr10:7844255 synonymous SNV . 0 24 hm5C_associated_SNPs_129655 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:7844240-7844260
64251 chr6 150571034 150571034 1 + T A rs541368960 150571030 + 150571010 150571050 41 TTGCTCTAGGAGCTGAGTTGCTGGTTTGGAAGTGTGGAGAT TTGCTCTAGGAGCTGAGTTGCTGGATTGGAAGTGTGGAGAT < 41bp 0.573992448639773 0.774411215274776 0.09837526 0.4647397 prediction 0.400837533270006 Functional Gain - PPP1R14C ENSG00000198729 UTR3 Human protein_coding chr6:150571030 chr6:150571034 . . 0 25 hm5C_associated_SNPs_129656 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr6:150570980-150571202
64251 chr11 212445 212445 1 + C T ESCA 212444 + 212424 212464 41 GCTGAAGGAGAGTGTAGCTCCCGTGCTGAGCGTGCTGACTG GCTGAAGGAGAGTGTAGCTCCTGTGCTGAGCGTGCTGACTG < 41bp 0.446792636720038 0.700413593480847 0.14163801 0.13759065 prediction 0.400827186961693 Functional Gain - RIC8A ENSG00000177963 CDS Human protein_coding chr11:212444 chr11:212445 synonymous SNV . 0 22 hm5C_associated_SNPs_129660 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr11:212435-212487
64251 chr1 155582074 155582074 1 + C T HNSC 155582073 + 155582053 155582093 41 TTCAGGGCGGGGAATAATAACCTGGGGCCTGCTACCTGGTC TTCAGGGCGGGGAATAATAACTTGGGGCCTGCTACCTGGTC < 41bp 0.446279936150932 0.700412068921165 0.45468605 0.37748796 prediction 0.400824137842331 Functional Gain - MSTO1 ENSG00000125459 CDS Human protein_coding chr1:155582073 chr1:155582074 synonymous SNV . 0 22 hm5C_associated_SNPs_129661 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:155582048-155582076
64251 chr17 41001205 41001205 1 + T G GBM 41001201 + 41001181 41001221 41 AGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGGAGGAC AGCGCCCACAGCTGACTCGGCAGGGCCTGGGAAAGGAGGAC < 41bp 0.489019125784096 0.700394779683881 0.6446452 0.7659031 prediction 0.400789559367762 Functional Gain - AOC2 ENSG00000131480 CDS Human protein_coding chr17:41001201 chr17:41001205 nonsynonymous SNV 0.963 0 25 hm5C_associated_SNPs_129669 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41001131-41001208
64251 chr1 227834313 227834313 1 + C A LUSC 227834309 + 227834289 227834329 41 GGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATA GGAGTGGGCATGCCTGGACCCTGCACAGCGAAATTTGTATA < 41bp 0.359141680296771 0.700394625695923 0.036798716 0.089434594 prediction 0.400789251391845 Functional Gain - ZNF678 ENSG00000181450 CDS Human protein_coding chr1:227834309 chr1:227834313 synonymous SNV . 0 25 hm5C_associated_SNPs_129670 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:227834302-227834322
64251 chr13 27847220 27847220 1 + C T rs36053943 27847219 + 27847199 27847239 41 GTCCAAATGCGTGCAGTGGGCCGAGGGTTTTCTGCTGGTCT GTCCAAATGCGTGCAGTGGGCTGAGGGTTTTCTGCTGGTCT < 41bp 0.465662297248512 0.700392984548972 0.39138687 0.2553481 prediction 0.400785969097944 Functional Gain - RASL11A ENSG00000122035 CDS Human protein_coding chr13:27847219 chr13:27847220 synonymous SNV . 0 22 hm5C_associated_SNPs_129672 0 0 5 SRRM4 POSTAR2 GSE57278,GSM1378374 chr13:27847200-27847220
64251 chr14 74036526 74036526 1 + C A UCEC 74036525 + 74036505 74036545 41 CGAGCGCTACTTCCTCCCGCCCGGGGTGCGGCGCGAGCCGG CGAGCGCTACTTCCTCCCGCCAGGGGTGCGGCGCGAGCCGG < 41bp 0.637578699057693 0.837965349399805 0.9130226 0.9225701 prediction 0.400773300684225 Functional Gain - ACOT2 ENSG00000119673 CDS Human protein_coding chr14:74036525 chr14:74036526 synonymous SNV . 0 22 hm5C_associated_SNPs_129677 0 0 2 RPS3 POSTAR2 ENCODE chr14:74036517-74036558
64251 chr7 97822326 97822326 1 + C T PRAD 97822325 + 97822305 97822345 41 CGTGTTTAGATGTTATTGTCCCGGAGGACTGTCTCCACCAG CGTGTTTAGATGTTATTGTCCTGGAGGACTGTCTCCACCAG < 41bp 0.604395229282583 0.804780827320455 0.5061712 0.09371063 prediction 0.400771196075744 Functional Gain - LMTK2 ENSG00000164715 CDS Human protein_coding chr7:97822325 chr7:97822326 nonsynonymous SNV 0.001 0 22 hm5C_associated_SNPs_129678 0 0 9 NUDT21 POSTAR2 GSE37401,GSM917661 chr7:97822299-97822337
64251 chr14 24607580 24607580 1 + T C UCEC 24607577 + 24607557 24607597 41 TTTCTCTGAGCGTGGTGATGCAGTGACTAAAGCAGCCAAGC TTTCTCTGAGCGTGGTGATGCAGCGACTAAAGCAGCCAAGC < 41bp 0.550317844573224 0.750696870659948 0.3851373 0.40831405 prediction 0.400758052173447 Functional Gain - PSME1 ENSG00000092010 CDS Human protein_coding chr14:24607577 chr14:24607580 nonsynonymous SNV 0.892 3 24 hm5C_associated_SNPs_129681 0 0 10 DDX55 POSTAR2 ENCODE chr14:24607575-24607606
64251 chr8 22471738 22471738 1 + C T COAD 22471737 + 22471717 22471757 41 TTTTCCCTCCATCATCCAAGCCGGATCCAGGTCTCTTCTGA TTTTCCCTCCATCATCCAAGCTGGATCCAGGTCTCTTCTGA < 41bp 0.647650944820308 0.848029946081958 0.37289584 0.26063347 prediction 0.4007580025233 Functional Gain - CCAR2 ENSG00000158941 CDS Human protein_coding chr8:22471737 chr8:22471738 nonsynonymous SNV 0.981 4 22 hm5C_associated_SNPs_129682 0 0 6 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr8:22471713-22471745
64251 chr16 1825080 1825080 1 + C T PRAD 1825079 + 1825059 1825099 41 CTGGGTGCCCTGGATCTCCCCCGAGACCACCGCCCGGCCCC CTGGGTGCCCTGGATCTCCCCTGAGACCACCGCCCGGCCCC < 41bp 0.591765965136744 0.792135673698717 0.92195296 0.89444715 prediction 0.400739417123946 Functional Gain - EME2 ENSG00000197774 CDS Human protein_coding chr16:1825079 chr16:1825080 synonymous SNV . 0 22 hm5C_associated_SNPs_129688 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr16:1825079-1825080
64251 chr21 45107917 45107917 1 + C T STAD 45107916 + 45107896 45107936 41 GGAAGGCCCTCCCACAGGCCCCGCAGAGGGGGCGAACAGCC GGAAGGCCCTCCCACAGGCCCTGCAGAGGGGGCGAACAGCC < 41bp 0.635386228278638 0.835750641147809 0.012059808 0.06622255 prediction 0.400728825738342 Functional Gain - RRP1B ENSG00000160208 CDS Human protein_coding chr21:45107916 chr21:45107917 synonymous SNV . 0 22 hm5C_associated_SNPs_129689 0 0 4 FXR2 POSTAR2 ENCODE chr21:45107905-45107943
64251 chr11 119206798 119206798 1 + C A UCEC 119206797 + 119206777 119206817 41 GAGGGTATTCTCAGTTAGGACCCGGAGACAGGACACTCTTC GAGGGTATTCTCAGTTAGGACACGGAGACAGGACACTCTTC < 41bp 0.640689261080649 0.841052013734495 0.3154844 0.40080747 prediction 0.400725505307691 Functional Gain - RNF26 ENSG00000173456 CDS Human protein_coding chr11:119206797 chr11:119206798 synonymous SNV . 0 22 hm5C_associated_SNPs_129692 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:119206781-119206807
64251 chr14 24647373 24647373 1 + T G LUSC 24647369 + 24647349 24647389 41 TGTTCTGGGACAAGGAGACTCAGATCTCCCCGGAGAAATTC TGTTCTGGGACAAGGAGACTCAGAGCTCCCCGGAGAAATTC < 41bp 0.549440790713815 0.749800471396211 0.7451434 0.8537383 prediction 0.400719361364791 Functional Gain - REC8 ENSG00000100918 CDS Human protein_coding chr14:24647369 chr14:24647373 nonsynonymous SNV 0.991 3 25 hm5C_associated_SNPs_129693 0 0 2 BUD13 POSTAR2 ENCODE chr14:24647367-24647411
64251 chr12 52448961 52448961 1 + A G STAD 52448958 + 52448938 52448978 41 TGCCAGCATTATGGTGTCCGCACATGTGAGGGCTGCAAGGG TGCCAGCATTATGGTGTCCGCACGTGTGAGGGCTGCAAGGG < 41bp 0.44393505018814 0.700357300440527 0.14721414 0.23523173 prediction 0.400714600881054 Functional Gain - NR4A1 ENSG00000123358 CDS Human protein_coding chr12:52448958 chr12:52448961 synonymous SNV . 0 24 hm5C_associated_SNPs_129694 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr12:52448959-52448988
64251 chr17 38249332 38249332 1 + C A LUSC 38249328 + 38249308 38249348 41 GGCAGCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCC GGCAGCGGCAGAAGGCCGGCCGGGAGGGTCACTGGGCGTCC < 41bp 0.739359691791605 0.939711063967673 0.8953776 0.88573265 prediction 0.400702744352137 Functional Gain - THRA ENSG00000126351 CDS Human protein_coding chr17:38249328 chr17:38249332 synonymous SNV . 0 25 hm5C_associated_SNPs_129697 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr17:38249320-38249340
64251 chr19 48956004 48956004 1 + C T HNSC 48956003 + 48955983 48956023 41 ACCTTCAAGCAGCACGTGGCCCCCGTGACCTCCGTCGAGTG ACCTTCAAGCAGCACGTGGCCTCCGTGACCTCCGTCGAGTG < 41bp 0.439169642524804 0.700311227758418 0.13018376 0.11354244 prediction 0.400622455516836 Functional Gain - GRWD1 ENSG00000105447 CDS Human protein_coding chr19:48956003 chr19:48956004 nonsynonymous SNV 0.949 4 22 hm5C_associated_SNPs_129706 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr19:48955995-48956019
64251 chr12 107713542 107713542 1 + C G rs79492704 107713538 + 107713518 107713558 41 CTCGGGCTCCGGCCCAGGCCCGAGCTCGGGCCCTGGTGCGG CTCGGGCTCCGGCCCAGGCCCGAGGTCGGGCCCTGGTGCGG < 41bp 0.672177088057741 0.872486492782862 0.51083165 0.82616174 prediction 0.400618809450243 Functional Gain - BTBD11 ENSG00000151136 CDS Human protein_coding chr12:107713538 chr12:107713542 nonsynonymous SNV 0.255 0 25 hm5C_associated_SNPs_129708 0 0 1 XPO5 POSTAR2 ENCODE chr12:107713499-107713579
64251 chr3 49053238 49053238 1 + C T COAD 49053237 + 49053217 49053257 41 CCATTTTGCTGTGTGCTCACCCCCAGGATGTGTACCCGGTT CCATTTTGCTGTGTGCTCACCTCCAGGATGTGTACCCGGTT < 41bp 0.472449533037132 0.700299013683661 0.15904737 0.9460156 prediction 0.400598027367323 Functional Gain - DALRD3 ENSG00000178149 CDS Human protein_coding chr3:49053237 chr3:49053238 nonsynonymous SNV 0.967 3 22 hm5C_associated_SNPs_129713 0 0 29 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr3:49053180-49053240
64251 chr1 15287349 15287349 1 + C T rs564734728 15287348 + 15287328 15287368 41 CCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGC CCAGAAGGAGCAGGAGCTAGCTAGAGCCAAAGAAGCCTTGC < 41bp 0.609779538932673 0.81007843098565 0.9024743 0.8378283 prediction 0.400597784105954 Functional Gain - KAZN ENSG00000189337 CDS Human protein_coding chr1:15287348 chr1:15287349 synonymous SNV . 0 22 hm5C_associated_SNPs_129714 0 0 4 BUD13 POSTAR2 ENCODE chr1:15287305-15287363
64251 chrX 135593704 135593704 1 + C T LUSC 135593703 + 135593683 135593723 41 AGAAAATGACTCTGAAAACTCCGAATTTGAAGATGACGGCT AGAAAATGACTCTGAAAACTCTGAATTTGAAGATGACGGCT < 41bp 0.469482886165847 0.700296582531673 0.20464495 0.11859605 prediction 0.400593165063345 Functional Gain - HTATSF1 ENSG00000102241 CDS Human protein_coding chrX:135593703 chrX:135593704 synonymous SNV . 0 22 hm5C_associated_SNPs_129715 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chrX:135593663-135593720
64251 chr1 2160443 2160443 1 + C T LUSC 2160442 + 2160422 2160462 41 GTGCTGCACCTGCCCGCCATCCAGCCGCCGCCGCCCGTGCT GTGCTGCACCTGCCCGCCATCTAGCCGCCGCCGCCCGTGCT < 41bp 0.475478698826973 0.700293469592363 0.8642904 0.379982 prediction 0.400586939184727 Functional Gain - SKI ENSG00000157933 CDS Human protein_coding chr1:2160442 chr1:2160443 stopgain 1.000 0 22 hm5C_associated_SNPs_129719 0 0 8 LIN28A POSTAR2 GSE44616,GSM1087848 chr1:2160427-2160463
64251 chr19 41268813 41268813 1 + C T UCEC 41268812 + 41268792 41268832 41 CCCTCTCTCCACAGGGCATGCCGCCGATGACTCAGGCGCCC CCCTCTCTCCACAGGGCATGCTGCCGATGACTCAGGCGCCC < 41bp 0.454590771260148 0.700292525711296 0.23893791 0.26596892 prediction 0.400585051422593 Functional Gain - SNRPA ENSG00000077312 CDS Human protein_coding chr19:41268812 chr19:41268813 nonsynonymous SNV 0.590 3 22 hm5C_associated_SNPs_129721 0 0 4 BUD13 POSTAR2 ENCODE chr19:41268805-41268829
64251 chr7 98972353 98972353 1 + A G rs528777918 98972350 + 98972330 98972370 41 GCTGCTGCTCCGGCGCGGAGCCCAGAGCCGGTTCGGCGCGT GCTGCTGCTCCGGCGCGGAGCCCGGAGCCGGTTCGGCGCGT < 41bp 0.577073164455388 0.777364874443392 0.5409734 0.85680443 prediction 0.400583419976007 Functional Gain - ARPC1B ENSG00000130429 UTR5 Human protein_coding chr7:98972350 chr7:98972353 . . 0 24 hm5C_associated_SNPs_129722 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:98972340-98972360
64251 chr16 67197847 67197847 1 + C T rs189620418 67197846 + 67197826 67197866 41 TGTTGCCCCCCGGGTCTTTACCGAGTTGGGAACTGTGATGG TGTTGCCCCCCGGGTCTTTACTGAGTTGGGAACTGTGATGG < 41bp 0.516989286065663 0.717278798469222 0.93526644 0.91554826 prediction 0.400579024807117 Functional Gain - FBXL8 ENSG00000135722 UTR3 Human protein_coding chr16:67197846 chr16:67197847 . . 0 22 hm5C_associated_SNPs_129724 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:67197836-67197874
64251 chrX 102612729 102612729 1 + C T SKCM 102612728 + 102612708 102612748 41 GGAGAAGCTAGAGGAGGAGGCCAAAGCAAAAGGAACTTTTA GGAGAAGCTAGAGGAGGAGGCTAAAGCAAAAGGAACTTTTA < 41bp 0.604346350410429 0.804631409646247 0.14529517 0.30755806 prediction 0.400570118471636 Functional Gain - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612728 chrX:102612729 synonymous SNV . 0 22 hm5C_associated_SNPs_129730 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714641 chrX:102612711-102612749
64251 chr20 307204 307204 1 + C A rs546352861 307203 + 307183 307223 41 GCCGTCGGGCGAGGGGGCGGCCGCCGCCGCCGCCGCCTCCC GCCGTCGGGCGAGGGGGCGGCAGCCGCCGCCGCCGCCTCCC < 41bp 0.621479564817027 0.821759751056478 0.8600996 0.9176655 prediction 0.400560372478902 Functional Gain - SOX12 ENSG00000177732 CDS Human protein_coding chr20:307203 chr20:307204 synonymous SNV . 0 22 hm5C_associated_SNPs_129731 0 0 3 DDX55 POSTAR2 ENCODE chr20:307168-307205
64251 chr11 102218176 102218176 1 + A G rs12279809 102218173 + 102218153 102218193 41 GACGCGAGGGCCCGCGGGGGCCCACTTCCCTGATGTGGCGG GACGCGAGGGCCCGCGGGGGCCCGCTTCCCTGATGTGGCGG < 41bp 0.455929428909095 0.700277171723741 0.33516407 0.27069163 prediction 0.400554343447481 Functional Gain - BIRC2 ENSG00000110330 intronic Human protein_coding chr11:102218173 chr11:102218176 . . 0 24 hm5C_associated_SNPs_129732 0 0 13 BUD13 POSTAR2 ENCODE chr11:102218133-102218194
64251 chr20 56287042 56287042 1 + C T rs138488917 56287041 + 56287021 56287061 41 CCAGACACAGCCCCTGCCCTCCGGGAAGTCTCGGGAGACCT CCAGACACAGCCCCTGCCCTCTGGGAAGTCTCGGGAGACCT < 41bp 0.545262865794705 0.745539005913433 0.9044604 0.70851094 prediction 0.400552280237457 Functional Gain - NKILA ENSG00000124225 upstream Human protein_coding chr20:56287041 chr20:56287042 . . 0 22 hm5C_associated_SNPs_129733 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:56287025-56287063
64251 chr3 32483464 32483464 1 + C T UCEC 32483463 + 32483443 32483483 41 TTTTACCTGGTCCACCTCTTCCGCTTCTACCGCGTGCTCAC TTTTACCTGGTCCACCTCTTCTGCTTCTACCGCGTGCTCAC < 41bp 0.437142027046503 0.700270067169022 0.049673706 0.047117233 prediction 0.400540134338044 Functional Gain - CMTM7 ENSG00000153551 CDS Human protein_coding chr3:32483463 chr3:32483464 nonsynonymous SNV 0.999 2 22 hm5C_associated_SNPs_129736 0 0 4 NUDT21 POSTAR2 GSE37401,GSM917661 chr3:32483429-32483467
64251 chr22 24236660 24236660 1 + T G COAD 24236658 + 24236638 24236678 41 GGGTCTCCTGGTCCTTCTGCCATCATGCCGATGTTCATCGT GGGTCTCCTGGTCCTTCTGCCAGCATGCCGATGTTCATCGT < 41bp 0.624040561249708 0.824305627779986 0.18977854 0.35850888 prediction 0.400530133060556 Functional Gain - MIF-AS1 ENSG00000240972;ENSG00000218537 UTR5;UTR3 Human other chr22:24236658 chr22:24236660 . . 0 23 hm5C_associated_SNPs_129738 0 0 65 NCBP3 POSTAR2 GSE38201,GSM936507 chr22:24236634-24236662
64251 chr17 38324465 38324465 1 + C T UCEC 38324464 + 38324444 38324484 41 CTCCTTATCCAGGTTTACATCCCCACCAGACACCAGCTCCT CTCCTTATCCAGGTTTACATCTCCACCAGACACCAGCTCCT < 41bp 0.418456823036512 0.700260182181129 0.11554474 0.9425015 prediction 0.400520364362259 Functional Gain - CASC3 ENSG00000108349 CDS Human protein_coding chr17:38324464 chr17:38324465 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129741 0 0 11 IGF2BP2 POSTAR2 GSE21578,GSM545208 chr17:38324456-38324479
64251 chr5 77771419 77771419 1 + C T COAD 77771418 + 77771398 77771438 41 GTCCAACAAAACTGTCCAGACCGCAGCTGCAAATGCAGCTT GTCCAACAAAACTGTCCAGACTGCAGCTGCAAATGCAGCTT < 41bp 0.616145296388696 0.816401749419797 0.2730183 0.29145035 prediction 0.400512906062202 Functional Gain - SCAMP1 ENSG00000085365 CDS Human protein_coding chr5:77771418 chr5:77771419 synonymous SNV . 0 22 hm5C_associated_SNPs_129744 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr5:77771411-77771439
64251 chr3 179051102 179051102 1 + C T LUSC 179051101 + 179051081 179051121 41 GTGATGAAGAGTGTGACTCACCTGAATCAGTCAACCAGCAA GTGATGAAGAGTGTGACTCACTTGAATCAGTCAACCAGCAA < 41bp 0.453609908224457 0.700255544968802 0.108039826 0.17013088 prediction 0.400511089937603 Functional Gain - ZNF639 ENSG00000121864 CDS Human protein_coding chr3:179051101 chr3:179051102 nonsynonymous SNV 0.998 4 22 hm5C_associated_SNPs_129745 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:179051063-179051134
64251 chr6 1610981 1610981 1 + C T GBM 1610980 + 1610960 1611000 41 GCCCCGGACAAGAAGATCACCCTGAACGGCATCTACCAGTT GCCCCGGACAAGAAGATCACCTTGAACGGCATCTACCAGTT < 41bp 0.466341784529249 0.700253578120783 0.04849276 0.081495434 prediction 0.400507156241567 Functional Gain - FOXC1 ENSG00000054598 CDS Human protein_coding chr6:1610980 chr6:1610981 synonymous SNV . 0 22 hm5C_associated_SNPs_129746 0 0 15 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr6:1610925-1610982
64251 chr22 38352843 38352843 1 + C T PRAD 38352842 + 38352822 38352862 41 GCTAGATGACTTGGAGAATGCCGAAGAGGTCAGTATTCAGC GCTAGATGACTTGGAGAATGCTGAAGAGGTCAGTATTCAGC < 41bp 0.637247219187908 0.837494998602868 0.26966497 0.20904642 prediction 0.40049555882992 Functional Gain - POLR2F ENSG00000100142 CDS Human protein_coding chr22:38352842 chr22:38352843 synonymous SNV . 0 22 hm5C_associated_SNPs_129750 0 0 22 HNRNPC POSTAR2 GSE56010,GSM1350196 chr22:38352781-38352843
64251 chrX 24512955 24512955 1 + C G HNSC 24512954 + 24512934 24512974 41 TGAGAGAAGTTAATCTTCTGCCGGATAATTTACTTAACCGC TGAGAGAAGTTAATCTTCTGCGGGATAATTTACTTAACCGC < 41bp 0.388254533432673 0.700246228555278 0.68431515 0.8665689 prediction 0.400492457110555 Functional Gain - PDK3 ENSG00000067992 CDS Human protein_coding chrX:24512954 chrX:24512955 nonsynonymous SNV 1.000 4 22 hm5C_associated_SNPs_129752 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chrX:24512942-24512973
64251 chr12 54448878 54448878 1 + C T rs551263879 54448877 + 54448857 54448897 41 AGTCAGGTCAGCACCCCCGGCCGGCGCTGCGCCCAGCACCC AGTCAGGTCAGCACCCCCGGCTGGCGCTGCGCCCAGCACCC < 41bp 0.462879870219245 0.700245572942012 0.64912134 0.42184088 prediction 0.400491145884024 Functional Gain - HOXC4 ENSG00000198353;ENSG00000273266 CDS Human other chr12:54448877 chr12:54448878 synonymous SNV . 0 22 hm5C_associated_SNPs_129753 0 0 1 DGCR8 POSTAR2 ENCODE chr12:54448856-54448901
64251 chr14 24838810 24838810 1 + C T SKCM 24838809 + 24838789 24838829 41 CCCGACCTCCACCCCCTCGGCCTGGCATGCATTCGCCACCG CCCGACCTCCACCCCCTCGGCTTGGCATGCATTCGCCACCG < 41bp 0.552446549918188 0.752690858794778 0.19761607 0.19935471 prediction 0.400488617753181 Functional Gain - NFATC4 ENSG00000100968 CDS Human protein_coding chr14:24838809 chr14:24838810 nonsynonymous SNV 0.984 1 22 hm5C_associated_SNPs_129754 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr14:24838783-24838812
64251 chr19 4422787 4422787 1 + C T SKCM 4422786 + 4422766 4422806 41 GCGCAAGGAGAGACAGGAAGCCCTGGAGTGAGTGTCCTTGG GCGCAAGGAGAGACAGGAAGCTCTGGAGTGAGTGTCCTTGG < 41bp 0.454038660311325 0.700243797292391 0.24359807 0.16165695 prediction 0.400487594584783 Functional Gain - CHAF1A ENSG00000167670 CDS Human protein_coding chr19:4422786 chr19:4422787 synonymous SNV . 0 22 hm5C_associated_SNPs_129755 0 0 14 AGGF1 POSTAR2 ENCODE chr19:4422690-4422794
64251 chr7 150761329 150761329 1 + C A UCEC 150761328 + 150761308 150761348 41 GCCCTGGGACGCCTGGGTTCCCCGAGCAGGAGGAAGACGAA GCCCTGGGACGCCTGGGTTCCACGAGCAGGAGGAAGACGAA < 41bp 0.647429930511298 0.847672388591147 0.32831353 0.20724145 prediction 0.400484916159699 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150761328 chr7:150761329 nonsynonymous SNV 0.632 1 22 hm5C_associated_SNPs_129756 0 0 8 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:150761292-150761347
64251 chr17 1946174 1946174 1 + C A CESC 1946173 + 1946153 1946193 41 TTGGTGTCTGGTTTCTGTCCCCGGGGCATTGGGTTCAAGGA TTGGTGTCTGGTTTCTGTCCCAGGGGCATTGGGTTCAAGGA < 41bp 0.65111925265996 0.851359459825852 0.90760833 0.94507414 prediction 0.400480414331786 Functional Gain - OVCA2 ENSG00000262664 CDS Human protein_coding chr17:1946173 chr17:1946174 synonymous SNV . 0 22 hm5C_associated_SNPs_129757 0 0 14 CSTF2T POSTAR2 GSE37401,GSM917677 chr17:1946135-1946188
64251 chr10 101544402 101544402 1 + C A CHOL 101544398 + 101544378 101544418 41 TGGACAGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA TGGACAGTCCGGAGGCAGACCTGCAACTTTGTTTTGAGCAA < 41bp 0.268884349202202 0.700233911059547 0.038685024 0.18083417 prediction 0.400467822119093 Functional Gain - ABCC2 ENSG00000023839 CDS Human protein_coding chr10:101544398 chr10:101544402 nonsynonymous SNV 0.985 3 25 hm5C_associated_SNPs_129760 0 0 3 EIF3H POSTAR2 ENCODE chr10:101544366-101544404
64251 chr10 38647418 38647418 1 + C T LUAD 38647417 + 38647397 38647437 41 AGCAACCTGCAGTCATTCTTCCGGGCCTCCAAGGAACTTAA AGCAACCTGCAGTCATTCTTCTGGGCCTCCAAGGAACTTAA < 41bp 0.566064619578764 0.766295067177602 0.90973246 0.76071346 prediction 0.400460895197676 Functional Gain - HSD17B7P2 ENSG00000099251 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr10:38647417 chr10:38647418 . . 0 22 hm5C_associated_SNPs_129763 0 0 3 BUD13 POSTAR2 ENCODE chr10:38647396-38647424
64251 chr6 43029194 43029194 1 + C A GBM 43029193 + 43029173 43029213 41 GAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCT GAGGCCCTACGCAGTGAACACAAGGCCGTGCTGCAAAGCCT < 41bp 0.440295841025713 0.700229829669557 0.73718965 0.8706806 prediction 0.400459659339114 Functional Gain - KLC4 ENSG00000137171 CDS Human protein_coding chr6:43029193 chr6:43029194 nonsynonymous SNV 0.994 0 22 hm5C_associated_SNPs_129764 0 0 1 SRSF9 POSTAR2 ENCODE chr6:43029174-43029288
64251 chr10 69676232 69676232 1 + C T SKCM 69676231 + 69676211 69676251 41 TAGAAGATGAGCCTGATGTTCCAGAGAGAGCTGGAGGAGCT TAGAAGATGAGCCTGATGTTCTAGAGAGAGCTGGAGGAGCT < 41bp 0.629404392007966 0.829634207334746 0.15337774 0.1242308 prediction 0.400459630653559 Functional Gain - SIRT1 ENSG00000096717 CDS Human protein_coding chr10:69676231 chr10:69676232 nonsynonymous SNV 0.010 1 22 hm5C_associated_SNPs_129765 0 0 4 FUS POSTAR2 DRA001158,DRS012384 chr10:69676203-69676243
64251 chr11 73575504 73575504 1 + A G rs12262 73575501 + 73575481 73575521 41 AGTTAGAGTTCATCAGGAGACCCAACCCTTAGATTTCATAA AGTTAGAGTTCATCAGGAGACCCGACCCTTAGATTTCATAA < 41bp 0.586630591109522 0.786853915737244 0.021562517 0.02054888 prediction 0.400446649255444 Functional Gain - MRPL48 ENSG00000175581 UTR3 Human protein_coding chr11:73575501 chr11:73575504 . . 0 24 hm5C_associated_SNPs_129766 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:73575499-73575522
64251 chr17 79687735 79687735 1 + C G rs530871370 79687734 + 79687714 79687754 41 GGTCGAGGGCCACCGAGGTCCCGCGCACCGCTGCCTGCCCT GGTCGAGGGCCACCGAGGTCCGGCGCACCGCTGCCTGCCCT < 41bp 0.674032415797077 0.874249152979261 0.31798923 0.6223934 prediction 0.400433474364368 Functional Gain - SLC25A10 ENSG00000183048 UTR3 Human protein_coding chr17:79687734 chr17:79687735 . . 0 22 hm5C_associated_SNPs_129770 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:79687705-79687766
64251 chr16 30773060 30773060 1 - G A UCEC 30773061 - 30773041 30773081 41 AAGAGCGGCGAGATGCTCAACCGCAAGACCAGCCACTTTTT AAGAGCGGCGAGATGCTCAACTGCAAGACCAGCCACTTTTT < 41bp 0.580326419049201 0.780534036555491 0.05841729 0.12928516 prediction 0.40041523501258 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30773061 chr16:30773060 nonsynonymous SNV 0.006 2 22 hm5C_associated_SNPs_129773 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:30773052-30773072
64251 chr15 91136933 91136933 1 + C T SKCM 91136932 + 91136912 91136952 41 CGGGCTGGTGGAGAGGCCATCCAGGAACCGCTTCCACCCCC CGGGCTGGTGGAGAGGCCATCTAGGAACCGCTTCCACCCCC < 41bp 0.634822962525567 0.83502892834318 0.902845 0.8382392 prediction 0.400411931635226 Functional Gain - CRTC3 ENSG00000140577 CDS Human protein_coding chr15:91136932 chr15:91136933 synonymous SNV . 0 22 hm5C_associated_SNPs_129776 0 0 4 PPIG POSTAR2 ENCODE chr15:91136872-91136989
64251 chr1 25611111 25611111 1 + A G STAD 25611108 + 25611088 25611128 41 CGGCCATTGGCTTGGGCTTCCTCACCTCGAGTTTCCGGAGA CGGCCATTGGCTTGGGCTTCCTCGCCTCGAGTTTCCGGAGA < 41bp 0.447835188967881 0.700199827955323 0.024011433 0.034383565 prediction 0.400399655910647 Functional Gain - RHD ENSG00000187010 CDS Human protein_coding chr1:25611108 chr1:25611111 nonsynonymous SNV 0.002 0 24 hm5C_associated_SNPs_129779 0 0 2 GEMIN5 POSTAR2 ENCODE chr1:25611084-25611131
64251 chr2 192542965 192542965 1 + C T rs541440668 192542964 + 192542944 192542984 41 GGGACAGGCTGGGCGCGCGCCCGTGTGAGTGAGCGGGACTC GGGACAGGCTGGGCGCGCGCCTGTGTGAGTGAGCGGGACTC < 41bp 0.546406044182465 0.746587557734994 0.6154832 0.5595065 prediction 0.400363027105058 Functional Gain - NABP1 ENSG00000173559 UTR5 Human protein_coding chr2:192542964 chr2:192542965 . . 0 22 hm5C_associated_SNPs_129785 0 0 2 U2AF2 POSTAR2 GSE83923,CSM2221661 chr2:192542960-192542980
64251 chr12 71977878 71977878 1 + C T STAD 71977877 + 71977857 71977897 41 CCTGCTGGCCTTGACCATGGCCGCAGTTCCCCTGCTGGGTG CCTGCTGGCCTTGACCATGGCTGCAGTTCCCCTGCTGGGTG < 41bp 0.636310452799945 0.83648884910653 0.4120955 0.41223222 prediction 0.40035679261317 Functional Gain - LGR5 ENSG00000139292 CDS Human protein_coding chr12:71977877 chr12:71977878 synonymous SNV . 0 22 hm5C_associated_SNPs_129786 0 0 2 EIF3H POSTAR2 ENCODE chr12:71977849-71977923
64251 chr12 7067172 7067172 1 + C T SKCM 7067171 + 7067151 7067191 41 CCTGGGGGTGTCCTCAGCTTCCTGGACCAGATCAACCAGCG CCTGGGGGTGTCCTCAGCTTCTTGGACCAGATCAACCAGCG < 41bp 0.438285091803703 0.700174408781885 0.12605217 0.15887782 prediction 0.400348817563769 Functional Gain - PTPN6 ENSG00000111679 CDS Human protein_coding chr12:7067171 chr12:7067172 synonymous SNV . 0 22 hm5C_associated_SNPs_129789 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr12:7067141-7067176
64251 chr8 145617309 145617309 1 + C T SKCM 145617308 + 145617288 145617328 41 CTAGTTCTGGTGCGGAAAGGCCCGGACGGGAAAGCGGAGCT CTAGTTCTGGTGCGGAAAGGCTCGGACGGGAAAGCGGAGCT < 41bp 0.634650158537497 0.834811492388251 0.34808573 0.23073065 prediction 0.400322667701508 Functional Gain - ADCK5 ENSG00000173137 CDS Human protein_coding chr8:145617308 chr8:145617309 nonsynonymous SNV 0.679 0 22 hm5C_associated_SNPs_129796 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr8:145617290-145617328
64251 chr18 48610372 48610372 1 + A G rs75712226 48610369 + 48610349 48610389 41 ATAAACACTTAACGCGCGTGCGCACGCGCGCGCGCACACAC ATAAACACTTAACGCGCGTGCGCGCGCGCGCGCGCACACAC < 41bp 0.511481639738906 0.711619664175239 0.16844663 0.19839919 prediction 0.400276048872666 Functional Gain - SMAD4 ENSG00000141646 UTR3 Human protein_coding chr18:48610369 chr18:48610372 . . 0 24 hm5C_associated_SNPs_129803 3 0 5 EWSR1 POSTAR2 SRX029344 chr18:48610346-48610373
64251 chr7 98985702 98985702 1 + C A LUAD 98985698 + 98985678 98985718 41 CGAGAGTAACCGTATTGTGACCTGCGGCACAGACCGCAACG CGAGAGTAACCGTATTGTGACCTGAGGCACAGACCGCAACG < 41bp 0.29726732807259 0.700127579584589 0.28817427 0.71586066 prediction 0.400255159169177 Functional Gain - ARPC1B ENSG00000130429 CDS Human protein_coding chr7:98985698 chr7:98985702 stopgain 0.147 1 25 hm5C_associated_SNPs_129807 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr7:98985696-98985743
64251 chr16 57786449 57786449 1 + C T UCEC 57786448 + 57786428 57786468 41 GGCTGCCTTTGCAGGACAATCCGCTTCTGGGACCTGGAGAA GGCTGCCTTTGCAGGACAATCTGCTTCTGGGACCTGGAGAA < 41bp 0.443350194528376 0.700125328258966 0.5119202 0.29430467 prediction 0.400250656517932 Functional Gain - KATNB1 ENSG00000140854 CDS Human protein_coding chr16:57786448 chr16:57786449 nonsynonymous SNV 0.464 4 22 hm5C_associated_SNPs_129809 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:57786444-57786467
64251 chr19 50098989 50098989 1 + C G LUAD 50098985 + 50098965 50099005 41 GGCAAGGGTTTGGAGGGGGGCAGGCACAGGACTTGAGCAAA GGCAAGGGTTTGGAGGGGGGCAGGGACAGGACTTGAGCAAA < 41bp 0.403472686044058 0.700121236256209 0.89135265 0.90986675 prediction 0.400242472512419 Functional Gain - PRR12 ENSG00000126464 CDS Human protein_coding chr19:50098985 chr19:50098989 nonsynonymous SNV 0.997 3 25 hm5C_associated_SNPs_129810 0 0 4 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr19:50098958-50098992
64251 chr2 160569067 160569067 1 + C G rs117626556 160569063 + 160569043 160569083 41 GCGGGCGCCATTGTGCTTCGCTGCCGACTGCATTTCCTCAG GCGGGCGCCATTGTGCTTCGCTGCGGACTGCATTTCCTCAG < 41bp 0.668250030653799 0.86836139722315 0.34392548 0.575132 prediction 0.400222733138703 Functional Gain - MARCH7 ENSG00000136536 UTR5 Human protein_coding chr2:160569063 chr2:160569067 . . 0 25 hm5C_associated_SNPs_129818 0 0 15 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:160569052-160569081
64251 chr9 139887631 139887631 1 + C T SKCM 139887630 + 139887610 139887650 41 ACCAGGCCCAGAGGCAGCCCCCAGGCTGCGGGCGCTGACAC ACCAGGCCCAGAGGCAGCCCCTAGGCTGCGGGCGCTGACAC < 41bp 0.630650847614102 0.830757583760503 0.7849982 0.6543114 prediction 0.4002134722928 Functional Gain - C9orf142 ENSG00000148362 CDS Human protein_coding chr9:139887630 chr9:139887631 synonymous SNV . 0 22 hm5C_associated_SNPs_129823 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012389 chr9:139887612-139887648
64251 chr14 45433457 45433457 1 + C A UCEC 45433453 + 45433433 45433473 41 TTTGGCACATGGAGCAGATACGGACTGGCTTTTGGCTGGTA TTTGGCACATGGAGCAGATACGGAATGGCTTTTGGCTGGTA < 41bp 0.296780797327065 0.70009325065757 0.20157725 0.24095929 prediction 0.40018650131514 Functional Gain - TOGARAM1 ENSG00000198718 CDS Human protein_coding chr14:45433453 chr14:45433457 nonsynonymous SNV 0.990 3 25 hm5C_associated_SNPs_129827 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:45433431-45433457
64251 chr7 127228564 127228564 1 + C T SKCM 127228563 + 127228543 127228583 41 GGGCCCCGCCATGGGCCTCACCGTGTCCGCGCTCTTTTCGC GGGCCCCGCCATGGGCCTCACTGTGTCCGCGCTCTTTTCGC < 41bp 0.538866863198253 0.738959354803044 0.23546898 0.25734234 prediction 0.400184983209582 Functional Gain - ARF5 ENSG00000004059 CDS Human protein_coding chr7:127228563 chr7:127228564 synonymous SNV . 0 22 hm5C_associated_SNPs_129829 0 0 13 DDX3X POSTAR2 GSE70804,GSM1819212 chr7:127228460-127228600
64251 chr6 160239666 160239666 1 + C T BLCA 160239665 + 160239645 160239685 41 GTGAACCAAGTGAACCTCATCCGAGCGGGGGTCCCAAAGAT GTGAACCAAGTGAACCTCATCTGAGCGGGGGTCCCAAAGAT < 41bp 0.445223727219264 0.700087901422685 0.37208983 0.3642644 prediction 0.400175802845371 Functional Gain - PNLDC1 ENSG00000146453 CDS Human protein_coding chr6:160239665 chr6:160239666 stopgain 0.997 1 22 hm5C_associated_SNPs_129832 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:160239659-160239708
64251 chr20 57767402 57767402 1 + C G rs200214226 57767398 + 57767378 57767418 41 CCAAACAGGGCAGCATCGACCTGCCCACGCCCTACACCTAC CCAAACAGGGCAGCATCGACCTGCGCACGCCCTACACCTAC < 41bp 0.398036493659758 0.700083181086568 0.0961231 0.11021057 prediction 0.400166362173136 Functional Gain - ZNF831 ENSG00000124203 CDS Human protein_coding chr20:57767398 chr20:57767402 nonsynonymous SNV 0.995 3 25 hm5C_associated_SNPs_129834 0 0 2 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr20:57767400-57767420
64251 chr4 124319665 124319665 1 + C G rs571675258 124319664 + 124319644 124319684 41 GCCCCCGGCCACCGCTTCGGCCTAGGTGAGTGTGTGCGGCG GCCCCCGGCCACCGCTTCGGCGTAGGTGAGTGTGTGCGGCG < 41bp 0.396819604816348 0.700082263650442 0.28328288 0.3300671 prediction 0.400164527300884 Functional Gain - SPRY1 ENSG00000164056 UTR5 Human protein_coding chr4:124319664 chr4:124319665 . . 0 22 hm5C_associated_SNPs_129835 0 0 4 EIF3B POSTAR2 GSE65004,GSM1585667 chr4:124319634-124319668
64251 chr9 131039032 131039032 1 + C G LUAD 131039031 + 131039011 131039051 41 TGCCGCGGGGCCTTCCGATCCCCTGTGAGTATTTCTTCCCC TGCCGCGGGGCCTTCCGATCCGCTGTGAGTATTTCTTCCCC < 41bp 0.372932658610104 0.700079121224551 0.06709698 0.24774343 prediction 0.400158242449102 Functional Gain - SWI5 ENSG00000175854 CDS Human protein_coding chr9:131039031 chr9:131039032 nonsynonymous SNV 0.056 4 22 hm5C_associated_SNPs_129836 0 0 2 DDX3X POSTAR2 ENCODE chr9:131039009-131039033
64251 chr4 52938270 52938270 1 + C A HNSC 52938269 + 52938249 52938289 41 TATAAGAAACAGCTCCGAAACCTGAAGGAGGAGATAGCTGT TATAAGAAACAGCTCCGAAACATGAAGGAGGAGATAGCTGT < 41bp 0.435424633689146 0.700077903973953 0.14417386 0.10985187 prediction 0.400155807947906 Functional Gain - SPATA18 ENSG00000163071 CDS Human protein_coding chr4:52938269 chr4:52938270 nonsynonymous SNV 0.120 4 22 hm5C_associated_SNPs_129837 0 0 1 PPIG POSTAR2 ENCODE chr4:52938257-52938330
64251 chr17 7318874 7318874 1 + C A BRCA 7318873 + 7318853 7318893 41 TGGTGGATGGCGACGTGGTCCCCGATGACCCTGAGATCCTC TGGTGGATGGCGACGTGGTCCACGATGACCCTGAGATCCTC < 41bp 0.655803747494198 0.855862140868034 0.062668115 0.04934761 prediction 0.400116786747671 Functional Gain - NLGN2 ENSG00000169992 CDS Human protein_coding chr17:7318873 chr17:7318874 nonsynonymous SNV 0.859 4 22 hm5C_associated_SNPs_129846 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr17:7318836-7318876
64251 chr12 7055076 7055076 1 + C A UCEC 7055075 + 7055055 7055095 41 TGCTGCTGGTGGCAGCGTGGCCGCCTCCTGAGAGTTGGCCC TGCTGCTGGTGGCAGCGTGGCAGCCTCCTGAGAGTTGGCCC < 41bp 0.442073776738622 0.700058268293392 0.38762024 0.85671127 prediction 0.400116536586784 Functional Gain - C12orf57 ENSG00000111678 CDS Human protein_coding chr12:7055075 chr12:7055076 synonymous SNV . 0 22 hm5C_associated_SNPs_129847 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chr12:7055032-7055082
64251 chr16 88781314 88781314 1 + C G rs139862860 88781310 + 88781290 88781330 41 GAGGAGCAGCTGTGCTACAGCTGCCGCGTGAACATGAAGGA GAGGAGCAGCTGTGCTACAGCTGCGGCGTGAACATGAAGGA < 41bp 0.403400228473594 0.700051470087232 0.3117327 0.26370516 prediction 0.400102940174465 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88781310 chr16:88781314 nonsynonymous SNV 0.957 4 25 hm5C_associated_SNPs_129852 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr16:88781290-88781325
64251 chr1 28586376 28586376 1 + C G rs34315986 28586375 + 28586355 28586395 41 CACCATGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCA CACCATGATCGTGGCGGACTCGGAGTGCCGCGCAGAGCTCA < 41bp 0.696928183501099 0.896975968134403 0.7465588 0.91189027 prediction 0.400095569266608 Functional Gain - SESN2 ENSG00000130766 CDS Human protein_coding chr1:28586375 chr1:28586376 synonymous SNV . 0 22 hm5C_associated_SNPs_129855 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:28586348-28586391
64251 chr19 13084349 13084349 1 + C T SKCM 13084348 + 13084328 13084368 41 TGCTCGCAAGCGTTGGGCACCCGTGGTCCTGTGGTGTCTCA TGCTCGCAAGCGTTGGGCACCTGTGGTCCTGTGGTGTCTCA < 41bp 0.471305977913982 0.70004547050597 0.31435347 0.17673719 prediction 0.40009094101194 Functional Gain - DAND5 ENSG00000179284 CDS Human protein_coding chr19:13084348 chr19:13084349 synonymous SNV . 0 22 hm5C_associated_SNPs_129856 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr19:13084338-13084376
64251 chr13 45594491 45594491 1 + C T SKCM 45594490 + 45594470 45594510 41 ACAAGAAGCAAGGAAGTCATCCAGTAAGAAAGATGAAGAAC ACAAGAAGCAAGGAAGTCATCTAGTAAGAAAGATGAAGAAC < 41bp 0.458409525525884 0.700024883258502 0.07232949 0.1291658 prediction 0.400049766517004 Functional Gain - GPALPP1 ENSG00000133114 CDS Human protein_coding chr13:45594490 chr13:45594491 synonymous SNV . 0 22 hm5C_associated_SNPs_129867 0 0 1 ZNF622 POSTAR2 ENCODE chr13:45594473-45594564
64251 chr3 9979713 9979713 1 + C G rs2302787 9979712 + 9979692 9979732 41 GCCTCAGGCAGCAGGAGGCCCCGGACCTCTTCCAGTGGCTG GCCTCAGGCAGCAGGAGGCCCGGGACCTCTTCCAGTGGCTG < 41bp 0.704880936006536 0.904893723308806 0.88626707 0.9001434 prediction 0.40002557460454 Functional Gain - CRELD1 ENSG00000163703 CDS Human protein_coding chr3:9979712 chr3:9979713 nonsynonymous SNV 0.954 4 22 hm5C_associated_SNPs_129869 1 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr3:9979709-9979732
64251 chr1 118035838 118035838 1 + A G LUSC 118035835 + 118035815 118035855 41 ACTGAAAGCATGGTTGATGTCAGATAAAACAGACCATGAGG ACTGAAAGCATGGTTGATGTCAGGTAAAACAGACCATGAGG < 41bp 0.589133774360744 0.789144985880999 0.3428923 0.53483015 prediction 0.400022423040511 Functional Gain - MAN1A2 ENSG00000198162 CDS Human protein_coding chr1:118035835 chr1:118035838 nonsynonymous SNV 1.000 1 24 hm5C_associated_SNPs_129871 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr1:118035825-118035861
64251 chr17 43226681 43226681 1 + G C CESC 43226681 + 43226661 43226701 41 GCGCGGAGGAGCGGGTGCCCGAGGAGGACAGTAGGTGGCAA GCGCGGAGGAGCGGGTGCCCCAGGAGGACAGTAGGTGGCAA Direct Gain 0 0.987772355381033 0 0.940768837928772 prediction 0.975544710762066 Functional Gain - HEXIM1 ENSG00000186834 CDS Human protein_coding chr17:43226681 chr17:43226681 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_129885 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:43226661-43226699
64251 chr15 50474763 50474763 1 + G C UCEC 50474763 + 50474743 50474783 41 GCCGGAGGGTGCGCAGCTACGGGAAGCGGCGGCCGGCGCGC GCCGGAGGGTGCGCAGCTACCGGAAGCGGCGGCCGGCGCGC Direct Gain 0 0.987518575959602 0 0.916759967803955 prediction 0.975037151919204 Functional Gain - SLC27A2 ENSG00000140284 CDS Human protein_coding chr15:50474763 chr15:50474763 nonsynonymous SNV 0.042 0 21 hm5C_associated_SNPs_129887 0 0 2 RPS3 POSTAR2 ENCODE chr15:50474719-50474788
64251 chr9 103189743 103189743 1 + G C rs188954095 103189743 + 103189723 103189763 41 GTGGGGGGCGCGGGCCGGGCGTAGAGGGGGCCGGGGGCCGG GTGGGGGGCGCGGGCCGGGCCTAGAGGGGGCCGGGGGCCGG Direct Gain 0 0.986587317500084 0 0.898621559143066 prediction 0.973174635000168 Functional Gain - MSANTD3 ENSG00000066697 UTR5 Human protein_coding chr9:103189743 chr9:103189743 . . 0 21 hm5C_associated_SNPs_129890 0 0 1 BUD13 POSTAR2 ENCODE chr9:103189729-103189831
64251 chr12 105380131 105380131 1 + A C UCEC 105380131 + 105380111 105380151 41 AGTGCAGGCTTGAGGGAAGCATGGAGGTCCATGGCAAGCCC AGTGCAGGCTTGAGGGAAGCCTGGAGGTCCATGGCAAGCCC Direct Gain 0 0.986235864936658 0 0.765600681304932 prediction 0.972471729873316 Functional Gain - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380131 chr12:105380131 nonsynonymous SNV 0.565 2 21 hm5C_associated_SNPs_129891 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:105380120-105380140
64251 chr5 95067647 95067647 1 + G C COAD 95067647 + 95067627 95067667 41 GGGCTTATCCGCACTTACCTGGGGAGAAGCCCTCTGGTCTC GGGCTTATCCGCACTTACCTCGGGAGAAGCCCTCTGGTCTC Direct Gain 0 0.984589786936039 0 0.95508486032486 prediction 0.969179573872079 Functional Gain - RHOBTB3 ENSG00000164292 CDS Human protein_coding chr5:95067647 chr5:95067647 synonymous SNV . 0 21 hm5C_associated_SNPs_129900 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819215 chr5:95067640-95067660
64251 chr7 92077139 92077139 1 + T C rs532003876 92077139 + 92077119 92077159 41 GGGGAGATCCTCTGCCATCATTGCACTGGCCGGGGCGGCGC GGGGAGATCCTCTGCCATCACTGCACTGGCCGGGGCGGCGC Direct Gain 0 0.984491703590235 0 0.851851046085358 prediction 0.968983407180469 Functional Gain - GATAD1 ENSG00000157259 CDS Human protein_coding chr7:92077139 chr7:92077139 synonymous SNV . 0 21 hm5C_associated_SNPs_129901 0 0 5 GEMIN5 POSTAR2 ENCODE chr7:92077085-92077234
64251 chr12 64845918 64845918 1 + G C rs141593283 64845918 + 64845898 64845938 41 CCGGAAGTGTCCTGAGTCTCGAGGAGGCCGCGGGAGCCCGC CCGGAAGTGTCCTGAGTCTCCAGGAGGCCGCGGGAGCCCGC Direct Gain 0 0.984154580132998 0 0.924030661582947 prediction 0.968309160265997 Functional Gain - TBK1 ENSG00000183735 UTR5 Human protein_coding chr12:64845918 chr12:64845918 . . 0 21 hm5C_associated_SNPs_129904 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819213 chr12:64845917-64845919
64251 chr8 23119205 23119205 1 + T C rs7361 23119205 + 23119185 23119225 41 CTTTGAGGGACTGGGGGACTTGGGGTAGGGGGACAGACGGG CTTTGAGGGACTGGGGGACTCGGGGTAGGGGGACAGACGGG Direct Gain 0 0.984106346707291 0 0.943965435028076 prediction 0.968212693414582 Functional Gain - CHMP7 ENSG00000147457 UTR3 Human protein_coding chr8:23119205 chr8:23119205 . . 0 21 hm5C_associated_SNPs_129905 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr8:23119186-23119225
64251 chr14 35515739 35515739 1 + A C rs200121612 35515739 + 35515719 35515759 41 GCCCTGTGGTGGCGACGACGATGGACCAGGAGCCAGTGGGC GCCCTGTGGTGGCGACGACGCTGGACCAGGAGCCAGTGGGC Direct Gain 0 0.982814906692081 0 0.787821173667908 prediction 0.965629813384161 Functional Gain - FAM177A1 ENSG00000151327 CDS Human protein_coding chr14:35515739 chr14:35515739 nonsynonymous SNV 0.433 1 21 hm5C_associated_SNPs_129913 0 0 11 NCBP3 POSTAR2 GSE38201,GSM936507 chr14:35515738-35515766
64251 chr5 175875421 175875421 1 + G C rs184408647 175875421 + 175875401 175875441 41 GCGGCAAAATGGCGGCGCCTGAGGAGCGGGATCTAACCCAG GCGGCAAAATGGCGGCGCCTCAGGAGCGGGATCTAACCCAG Direct Gain 0 0.982410816912893 0 0.896212220191956 prediction 0.964821633825786 Functional Gain - FAF2 ENSG00000113194 CDS Human protein_coding chr5:175875421 chr5:175875421 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_129920 0 0 8 ELAVL1 POSTAR2 GSE28865,GSM714640 chr5:175875409-175875433
64251 chr7 129710524 129710524 1 + G C rs1062154 129710524 + 129710504 129710544 41 GGACAGGAACCGCCGGAGGGGAGGAGGCGCCGCCGGCGCTG GGACAGGAACCGCCGGAGGGCAGGAGGCGCCGCCGGCGCTG Direct Gain 0 0.982358105082132 0 0.805779099464417 prediction 0.964716210164265 Functional Gain - KLHDC10 ENSG00000128607 CDS Human protein_coding chr7:129710524 chr7:129710524 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_129921 0 0 6 DROSHA POSTAR2 ENCODE chr7:129710488-129710530
64251 chr6 57037117 57037117 1 + G C rs532204254 57037117 + 57037097 57037137 41 TTCGGGTAGTTCCTGGGTCCGGGGAGCAGACGATCCGCTAG TTCGGGTAGTTCCTGGGTCCCGGGAGCAGACGATCCGCTAG Direct Gain 0 0.981963762070955 0 0.944064974784851 prediction 0.963927524141911 Functional Gain - BAG2 ENSG00000226803 ncRNA_exonic Human antisense chr6:57037117 chr6:57037117 . . 0 21 hm5C_associated_SNPs_129923 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:57037100-57037120
64251 chr2 224822285 224822285 1 + G C CESC 224822285 + 224822265 224822305 41 CCTCCGGTTCGGGGAGTGAAGAAGGGATTCCGCGCCGCCTT CCTCCGGTTCGGGGAGTGAACAAGGGATTCCGCGCCGCCTT Direct Gain 0 0.981750028248229 0 0.934934735298157 prediction 0.963500056496459 Functional Gain - MRPL44 ENSG00000135900 CDS Human protein_coding chr2:224822285 chr2:224822285 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_129926 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:224822224-224822285
64251 chr19 36640675 36640675 1 + T C THYM 36640675 + 36640655 36640695 41 GGCAAAGGGGCTGGTGCTCTTGGGGTTCCCTGTCCTCACTC GGCAAAGGGGCTGGTGCTCTCGGGGTTCCCTGTCCTCACTC Direct Gain 0 0.981490653716873 0 0.989599466323853 prediction 0.962981307433747 Functional Gain - CAPNS1 ENSG00000126247 CDS Human protein_coding chr19:36640675 chr19:36640675 nonsynonymous SNV 0.001 1 21 hm5C_associated_SNPs_129930 0 0 7 RBM5 POSTAR2 ENCODE chr19:36640629-36640680
64251 chr7 139877088 139877088 1 + T C rs553225032 139877088 + 139877068 139877108 41 CGTGAGGACACGCGCGGTGGTGGCGGTGGCGGCGGGCGCGC CGTGAGGACACGCGCGGTGGCGGCGGTGGCGGCGGGCGCGC Direct Gain 0 0.981148912249467 0 0.862499833106995 prediction 0.962297824498935 Functional Gain - JHDM1D-AS1 ENSG00000260231 ncRNA_exonic Human antisense chr7:139877088 chr7:139877088 . . 0 21 hm5C_associated_SNPs_129935 0 0 1 SLTM POSTAR2 ENCODE chr7:139877078-139877195
64251 chr9 12775861 12775861 1 + T C BRCA 12775861 + 12775841 12775881 41 TGCGGGGGGAGCGGTGGTGGTGGCGGCGGCGGCGGCGGCTG TGCGGGGGGAGCGGTGGTGGCGGCGGCGGCGGCGGCGGCTG Direct Gain 0 0.980795433326629 0 0.92467737197876 prediction 0.961590866653259 Functional Gain - LURAP1L ENSG00000153714 CDS Human protein_coding chr9:12775861 chr9:12775861 synonymous SNV . 0 21 hm5C_associated_SNPs_129941 0 0 1 TBRG4 POSTAR2 ENCODE chr9:12775831-12775874
64251 chrX 117960489 117960489 1 + T C rs774160574 117960489 + 117960469 117960509 41 TGGGAAAACTGGGGTGGGGGTGGGGGTGGGACTTCTAACTG TGGGAAAACTGGGGTGGGGGCGGGGGTGGGACTTCTAACTG Direct Gain 0 0.980790234150446 0 0.939514935016632 prediction 0.961580468300891 Functional Gain - ZCCHC12 ENSG00000174460 UTR3 Human protein_coding chrX:117960489 chrX:117960489 . . 0 21 hm5C_associated_SNPs_129942 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chrX:117960472-117960509
64251 chr12 72148938 72148938 1 + G C rs200184881 72148938 + 72148918 72148958 41 GGCCGGCGGCGGCGGCGGCGGGGCGGCGGCGGCGGGCCGAG GGCCGGCGGCGGCGGCGGCGCGGCGGCGGCGGCGGGCCGAG Direct Gain 0 0.980743889804191 0 0.76660430431366 prediction 0.961487779608382 Functional Gain - RAB21 ENSG00000080371 CDS Human protein_coding chr12:72148938 chr12:72148938 nonsynonymous SNV 0.116 0 21 hm5C_associated_SNPs_129943 0 0 6 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:72148935-72148966
64251 chr6 28253391 28253391 1 + T C UCEC 28253391 + 28253371 28253411 41 CAGAATATCAAGGAGTCTCTTTGGAGTGTCAGAGCCTCCAG CAGAATATCAAGGAGTCTCTCTGGAGTGTCAGAGCCTCCAG Direct Gain 0 0.980032463094598 0 0.922921597957611 prediction 0.960064926189197 Functional Gain - PGBD1 ENSG00000137338 CDS Human protein_coding chr6:28253391 chr6:28253391 synonymous SNV . 0 21 hm5C_associated_SNPs_129954 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr6:28253373-28253399
64251 chr5 68485511 68485511 1 + G C ESCA 68485511 + 68485491 68485531 41 CGACGAGCCCGCGGACTCCGGAGGGGAAGGCCGGGCAGGCG CGACGAGCCCGCGGACTCCGCAGGGGAAGGCCGGGCAGGCG Direct Gain 0 0.979876597176133 0 0.899631142616272 prediction 0.959753194352265 Functional Gain - CENPH ENSG00000153044 CDS Human protein_coding chr5:68485511 chr5:68485511 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_129957 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:68485500-68485520
64251 chr19 7682939 7682939 1 - A G UCEC 7682939 - 7682919 7682959 41 GACCGCCCGGGTGGGGCTATTTGGGGGTGCCGCCGCCCTTC GACCGCCCGGGTGGGGCTATCTGGGGGTGCCGCCGCCCTTC Direct Gain 0 0.97972183838177 0 0.935806155204773 prediction 0.95944367676354 Functional Gain - CAMSAP3 ENSG00000076826 CDS Human protein_coding chr19:7682939 chr19:7682939 nonsynonymous SNV 0.987 4 21 hm5C_associated_SNPs_129959 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:7682933-7682961
64251 chr6 170190418 170190418 1 - T G rs3823467 170190418 - 170190398 170190438 41 CCCCTGGCCGCTGCTTTACCAGGGAGCGCCACCCCGTGCCC CCCCTGGCCGCTGCTTTACCCGGGAGCGCCACCCCGTGCCC Direct Gain 0 0.979686249646474 0 0.964119791984558 prediction 0.959372499292949 Functional Gain - LINC00242;LINC00574 ENSG00000229214;ENSG00000231690 ncRNA_exonic Human other chr6:170190418 chr6:170190418 . . 0 21 hm5C_associated_SNPs_129960 0 0 1 CSTF2T POSTAR2 ENCODE chr6:170190381-170190424
64251 chr3 197509952 197509952 1 + T C rs558735280 197509952 + 197509932 197509972 41 AATTAAAGTTCAGGCATTTATGGGGAGAAAAGGCCCTCCCC AATTAAAGTTCAGGCATTTACGGGGAGAAAAGGCCCTCCCC Direct Gain 0 0.979624392530159 0 0.95198380947113 prediction 0.959248785060318 Functional Gain - FYTTD1 ENSG00000122068 UTR3 Human protein_coding chr3:197509952 chr3:197509952 . . 0 21 hm5C_associated_SNPs_129961 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:197509921-197509958
64251 chr8 117779003 117779003 1 + T C COAD 117779003 + 117778983 117779023 41 GCAGCTGCCCCGCTACCTCATGGGGGAGACGCAGCTGTGCA GCAGCTGCCCCGCTACCTCACGGGGGAGACGCAGCTGTGCA Direct Gain 0 0.979495207696668 0 0.957830786705017 prediction 0.958990415393337 Functional Gain - UTP23 ENSG00000147679 CDS Human protein_coding chr8:117779003 chr8:117779003 nonsynonymous SNV 0.925 1 21 hm5C_associated_SNPs_129962 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:117779002-117779003
64251 chr18 67956148 67956148 1 + G C rs111974161 67956148 + 67956128 67956168 41 GCGGGCCCGAGTAGTGGACGGGGGGCGGCCCGCTCGGCTCC GCGGGCCCGAGTAGTGGACGCGGGGCGGCCCGCTCGGCTCC Direct Gain 0 0.979418978734678 0 0.979597330093384 prediction 0.958837957469355 Functional Gain - SOCS6 ENSG00000170677 UTR5 Human protein_coding chr18:67956148 chr18:67956148 . . 0 21 hm5C_associated_SNPs_129963 0 0 1 DDX3X POSTAR2 ENCODE chr18:67956148-67956229
64251 chr13 20532940 20532940 1 + G C rs536011658 20532940 + 20532920 20532960 41 CGCCGAAGGGGGGTGGGCCGGGGGAGGGGAGGTTCGTTCCG CGCCGAAGGGGGGTGGGCCGCGGGAGGGGAGGTTCGTTCCG Direct Gain 0 0.979307452824012 0 0.923740983009338 prediction 0.958614905648024 Functional Gain - ZMYM2 ENSG00000121741 UTR5 Human protein_coding chr13:20532940 chr13:20532940 . . 0 21 hm5C_associated_SNPs_129965 0 0 8 DDX24 POSTAR2 ENCODE chr13:20532935-20532982
64251 chr4 25678124 25678124 1 - A G rs116673562 25678124 - 25678104 25678144 41 TCTGGAAGCAGCCGGTGAACTTGGAGACGACGGCATCCCAG TCTGGAAGCAGCCGGTGAACCTGGAGACGACGGCATCCCAG Direct Gain 0 0.979188643471959 0 0.949930787086487 prediction 0.958377286943918 Functional Gain - SLC34A2 ENSG00000157765 CDS Human protein_coding chr4:25678124 chr4:25678124 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_129967 0 0 2 EIF3D POSTAR2 GSE65004,GSM1585671 chr4:25678111-25678127
64251 chr10 12875317 12875317 1 + G C rs185534013 12875317 + 12875297 12875337 41 CACACGGGGTGGGGGGAATGGGGGGAGCCCAGGTGATCCCC CACACGGGGTGGGGGGAATGCGGGGAGCCCAGGTGATCCCC Direct Gain 0 0.979159308016931 0 0.967764317989349 prediction 0.958318616033862 Functional Gain - CAMK1D ENSG00000183049 UTR3 Human protein_coding chr10:12875317 chr10:12875317 . . 0 21 hm5C_associated_SNPs_129968 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:12875296-12875328
64251 chr4 8621214 8621214 1 + T C LUSC 8621214 + 8621194 8621234 41 ACTGGGAGGTGCCAGCTCTTTGGGGGAGGCCACGGAGCCCG ACTGGGAGGTGCCAGCTCTTCGGGGGAGGCCACGGAGCCCG Direct Gain 0 0.979101144946682 0 0.980418801307678 prediction 0.958202289893365 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8621214 chr4:8621214 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_129969 0 0 2 SND1 POSTAR2 ENCODE chr4:8621163-8621269
64251 chr20 30193552 30193552 1 + G C BLCA 30193552 + 30193532 30193572 41 AGTTGGAACCCCCGGGGGCCGAGGGCTGCCGGTCCGGGCTC AGTTGGAACCCCCGGGGGCCCAGGGCTGCCGGTCCGGGCTC Direct Gain 0 0.978390563638158 0 0.76806366443634 prediction 0.956781127276316 Functional Gain - ID1 ENSG00000125968 CDS Human protein_coding chr20:30193552 chr20:30193552 nonsynonymous SNV 0.056 0 21 hm5C_associated_SNPs_129977 0 0 4 DDX6 POSTAR2 ENCODE chr20:30193532-30193582
64251 chr5 148727896 148727896 1 + G C OV 148727896 + 148727876 148727916 41 CTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTT CTGGTGAGGACTGCCGTTCTCAGGACCCTCCTGATGAGCTT Direct Gain 0 0.977868861859454 0 0.866879880428314 prediction 0.955737723718908 Functional Gain - GRPEL2 ENSG00000164284 CDS Human protein_coding chr5:148727896 chr5:148727896 nonsynonymous SNV 0.995 2 21 hm5C_associated_SNPs_129982 0 0 19 CPSF6 POSTAR2 GSE37401,GSM917665 chr5:148727838-148727991
64251 chr6 149068627 149068627 1 + A C rs9498146 149068627 + 149068607 149068647 41 CCTGGCCCCATGGGGCCCCTATGGGGGGCGCCCCTCCGGGC CCTGGCCCCATGGGGCCCCTCTGGGGGGCGCCCCTCCGGGC Direct Gain 0 0.977799353426024 0 0.939100861549377 prediction 0.955598706852047 Functional Gain - UST ENSG00000111962 CDS Human protein_coding chr6:149068627 chr6:149068627 nonsynonymous SNV 0.663 0 21 hm5C_associated_SNPs_129984 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819209 chr6:149068626-149068627
64251 chr6 18468139 18468139 1 + T C rs111522721 18468139 + 18468119 18468159 41 ACCTTGGGCTCCCAAAGTGTTGGGATTACAGGTGTGTGTCA ACCTTGGGCTCCCAAAGTGTCGGGATTACAGGTGTGTGTCA Direct Gain 0 0.977659145912996 0 0.88947868347168 prediction 0.955318291825991 Functional Gain - RNF144B ENSG00000137393 UTR3 Human protein_coding chr6:18468139 chr6:18468139 . . 0 21 hm5C_associated_SNPs_129986 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr6:18468137-18468172
64251 chr4 26585819 26585819 1 + T C KIRP 26585819 + 26585799 26585839 41 GGGCTAGGGCAGGGGAAATGTTGCAGGAGGAGTCGGACCTC GGGCTAGGGCAGGGGAAATGCTGCAGGAGGAGTCGGACCTC Direct Gain 0 0.977232935335355 0 0.903556823730469 prediction 0.95446587067071 Functional Gain - TBC1D19 ENSG00000109680 CDS Human protein_coding chr4:26585819 chr4:26585819 synonymous SNV . 0 21 hm5C_associated_SNPs_129995 0 0 1 NCBP2 POSTAR2 ENCODE chr4:26585677-26585819
64251 chr5 79950508 79950508 1 - C G rs1105525 79950508 - 79950488 79950528 41 GCCCGGCGGCAGGGCCTGGCGAGGAGCGCGAGCCCGCGGCC GCCCGGCGGCAGGGCCTGGCCAGGAGCGCGAGCCCGCGGCC Direct Gain 0 0.9768593608139 0 0.886819362640381 prediction 0.953718721627801 Functional Gain - DHFR;MSH3 ENSG00000113318;ENSG00000228716 UTR5 Human other chr5:79950508 chr5:79950508 . . 0 21 hm5C_associated_SNPs_130000 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819209 chr5:79950508-79950509
64251 chr3 132379394 132379394 1 + G C UCEC 132379394 + 132379374 132379414 41 TCCCAGCCATGGCGGAGTCTGTGGAGCGCCTGCAGCAGCGG TCCCAGCCATGGCGGAGTCTCTGGAGCGCCTGCAGCAGCGG Direct Gain 0 0.976707662692372 0 0.823205351829529 prediction 0.953415325384744 Functional Gain - UBA5 ENSG00000081307 CDS Human protein_coding chr3:132379394 chr3:132379394 nonsynonymous SNV 0.909 2 21 hm5C_associated_SNPs_130005 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:132379364-132379408
64251 chrX 102884995 102884995 1 + G C COAD 102884995 + 102884975 102885015 41 CGGAGGAGGAGTTCTTTCCTGAGGAGCTCTTGCCTGAGCTC CGGAGGAGGAGTTCTTTCCTCAGGAGCTCTTGCCTGAGCTC Direct Gain 0 0.976677981564453 0 0.953062415122986 prediction 0.953355963128905 Functional Gain - TCEAL1 ENSG00000172465 CDS Human protein_coding chrX:102884995 chrX:102884995 nonsynonymous SNV 0.894 0 21 hm5C_associated_SNPs_130006 0 0 1 GRWD1 POSTAR2 ENCODE chrX:102884821-102884995
64251 chr1 150280533 150280533 1 + T C BLCA 150280533 + 150280513 150280553 41 ATTAAGCATCGGCGGTATTATGAGAAGCCATGCCGCCGGCG ATTAAGCATCGGCGGTATTACGAGAAGCCATGCCGCCGGCG Direct Gain 0 0.976626603983624 0 0.851639807224274 prediction 0.953253207967248 Functional Gain - MRPS21 ENSG00000187145 CDS Human other chr1:150280533 chr1:150280533 synonymous SNV . 0 21 hm5C_associated_SNPs_130008 0 0 22 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:150280480-150280540
64251 chr6 7590554 7590554 1 + G C LUSC 7590554 + 7590534 7590574 41 AGGAGGAGCTGAACGAGTTCGTGGAGAGCGGCTGCCGGACG AGGAGGAGCTGAACGAGTTCCTGGAGAGCGGCTGCCGGACG Direct Gain 0 0.97660059810312 0 0.881253838539124 prediction 0.953201196206241 Functional Gain - SNRNP48 ENSG00000168566 CDS Human protein_coding chr6:7590554 chr6:7590554 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_130009 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:7590541-7590586
64251 chr6 89855893 89855893 1 + A C KIRC 89855893 + 89855873 89855913 41 GGAGGGGAGCGGCCCGTGGAAGGGGGCGCGTGCAATGGCCG GGAGGGGAGCGGCCCGTGGACGGGGGCGCGTGCAATGGCCG Direct Gain 0 0.976574024752934 0 0.877761483192444 prediction 0.953148049505869 Functional Gain - PM20D2 ENSG00000146281 CDS Human protein_coding chr6:89855893 chr6:89855893 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_130011 0 0 2 DDX3X POSTAR2 ENCODE chr6:89855803-89855918
64251 chr20 306605 306605 1 + G C MESO 306605 + 306585 306625 41 GCGCGAGGGCCAAGCGGGACGGCGGGCCGCCGCCCCCGGGA GCGCGAGGGCCAAGCGGGACCGCGGGCCGCCGCCCCCGGGA Direct Gain 0 0.976401635665578 0 0.885872662067413 prediction 0.952803271331156 Functional Gain - SOX12 ENSG00000177732 CDS Human protein_coding chr20:306605 chr20:306605 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_130012 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:306604-306605
64251 chr16 53468553 53468553 1 + G C rs577332958 53468553 + 53468533 53468573 41 ATGAGGAGGAGGAGGACGACGGCGAGGCGGAAGACGCCGCG ATGAGGAGGAGGAGGACGACCGCGAGGCGGAAGACGCCGCG Direct Gain 0 0.976192336050526 0 0.88512122631073 prediction 0.952384672101052 Functional Gain - RBL2 ENSG00000103479 CDS Human protein_coding chr16:53468553 chr16:53468553 nonsynonymous SNV 0.828 1 21 hm5C_associated_SNPs_130015 0 0 1 FXR2 POSTAR2 ENCODE chr16:53468530-53468608
64251 chr17 56167100 56167100 1 + T C rs562221344 56167100 + 56167080 56167120 41 AGGCTGCAGGGGGACAGTGTTGGGATTGTCAAGGAAAAAGG AGGCTGCAGGGGGACAGTGTCGGGATTGTCAAGGAAAAAGG Direct Gain 0 0.976133642886087 0 0.907693982124329 prediction 0.952267285772174 Functional Gain - DYNLL2 ENSG00000264364 UTR3 Human protein_coding chr17:56167100 chr17:56167100 . . 0 21 hm5C_associated_SNPs_130017 0 0 15 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:56167027-56167105
64251 chr17 30771560 30771560 1 + G C BRCA 30771560 + 30771540 30771580 41 AGATGGCGGCGGCGGCGGTGGTGGAGTTCCAGAGAGCCCAG AGATGGCGGCGGCGGCGGTGCTGGAGTTCCAGAGAGCCCAG Direct Gain 0 0.975912316165483 0 0.819609344005585 prediction 0.951824632330967 Functional Gain - PSMD11 ENSG00000108671 CDS Human protein_coding chr17:30771560 chr17:30771560 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130020 0 0 12 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:30771537-30771563
64251 chr1 154956407 154956407 1 + T C UCEC 154956407 + 154956387 154956427 41 CCGTGCTTGCGACCCCTATTTGGGGGTCTGGGTGGCTACTG CCGTGCTTGCGACCCCTATTCGGGGGTCTGGGTGGCTACTG Direct Gain 0 0.975806318354447 0 0.991718769073486 prediction 0.951612636708894 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154956407 chr1:154956407 synonymous SNV . 0 21 hm5C_associated_SNPs_130024 0 0 14 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:154956395-154956415
64251 chr20 42087020 42087020 1 + G C BLCA 42087020 + 42087000 42087040 41 GGTACGGCTTCGTGGAGTTCGAGGACTCCCGCGACGCCGAC GGTACGGCTTCGTGGAGTTCCAGGACTCCCGCGACGCCGAC Direct Gain 0 0.975794223668786 0 0.881306171417236 prediction 0.951588447337572 Functional Gain - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42087020 chr20:42087020 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130025 0 0 28 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:42087000-42087020
64251 chr1 236341802 236341802 1 + T C BRCA 236341802 + 236341782 236341822 41 TGCTGGTAAAGACGGGAAATTGGGAGAGGAAGGTTATCGTC TGCTGGTAAAGACGGGAAATCGGGAGAGGAAGGTTATCGTC Direct Gain 0 0.975575655599094 0 0.868076324462891 prediction 0.951151311198188 Functional Gain - GPR137B ENSG00000077585 CDS Human protein_coding chr1:236341802 chr1:236341802 nonsynonymous SNV 0.115 0 21 hm5C_associated_SNPs_130026 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr1:236341798-236341819
64251 chr20 5987125 5987125 1 + G C rs568654866 5987125 + 5987105 5987145 41 CGCGGGGAAGGCGGCTCCCAGGCCAGCGGCCGGAGCGGGCG CGCGGGGAAGGCGGCTCCCACGCCAGCGGCCGGAGCGGGCG Direct Gain 0 0.975442646268028 0 0.960296392440796 prediction 0.950885292536057 Functional Gain - CRLS1 ENSG00000088766 CDS Human protein_coding chr20:5987125 chr20:5987125 nonsynonymous SNV 0.025 0 21 hm5C_associated_SNPs_130030 0 0 6 DDX3X POSTAR2 ENCODE chr20:5987073-5987179
64251 chr4 123747943 123747943 1 + G C rs75664870 123747943 + 123747923 123747963 41 GCGGGAGGCTGGTGGGTGTGGGGGGTGGAGATGTAGAAGAT GCGGGAGGCTGGTGGGTGTGCGGGGTGGAGATGTAGAAGAT Direct Gain 0 0.975331771548357 0 0.899964690208435 prediction 0.950663543096714 Functional Gain - FGF2 ENSG00000138685 CDS Human protein_coding chr4:123747943 chr4:123747943 nonsynonymous SNV 0.033 1 21 hm5C_associated_SNPs_130031 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr4:123747940-123747960
64251 chr6 43484895 43484895 1 + G C OV 43484895 + 43484875 43484915 41 ATGCGGAGCCGCGTGGTTCTGGGGGAGTTTGGGGTTCGCAA ATGCGGAGCCGCGTGGTTCTCGGGGAGTTTGGGGTTCGCAA Direct Gain 0 0.975248080056684 0 0.953598141670227 prediction 0.950496160113368 Functional Gain - POLR1C ENSG00000171453 CDS Human protein_coding chr6:43484895 chr6:43484895 synonymous SNV . 0 21 hm5C_associated_SNPs_130032 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr6:43484890-43484912
64251 chr1 110585728 110585728 1 + G C CESC 110585728 + 110585708 110585748 41 AGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCATGAAG AGTGCACGCTAGGCGGCTTTCAGGAGCTGCAGAGCATGAAG Direct Gain 0 0.975169204766203 0 0.970048904418945 prediction 0.950338409532407 Functional Gain - STRIP1 ENSG00000143093 CDS Human protein_coding chr1:110585728 chr1:110585728 nonsynonymous SNV 0.998 3 21 hm5C_associated_SNPs_130036 0 0 2 PRPF8 POSTAR2 ENCODE chr1:110585697-110585749
64251 chr1 153617603 153617603 1 + G C rs148930480 153617603 + 153617583 153617623 41 AGGCCGAGGCCGTGGACGAGGGAGAGGTGCCCTTGCTCGCC AGGCCGAGGCCGTGGACGAGCGAGAGGTGCCCTTGCTCGCC Direct Gain 0 0.97502707722443 0 0.740226268768311 prediction 0.950054154448861 Functional Gain - CHTOP ENSG00000160679 CDS Human protein_coding chr1:153617603 chr1:153617603 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_130044 0 0 25 ELAVL1 POSTAR2 GSE28865,GSM714639 chr1:153617547-153617604
64251 chr5 36152987 36152987 1 + G C HNSC 36152987 + 36152967 36153007 41 GGCATGGGGGTCTCCGCCCTGGAGAAAGAGGAGCCCGACAG GGCATGGGGGTCTCCGCCCTCGAGAAAGAGGAGCCCGACAG Direct Gain 0 0.975009104316047 0 0.969994306564331 prediction 0.950018208632095 Functional Gain - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36152987 chr5:36152987 synonymous SNV . 0 21 hm5C_associated_SNPs_130046 0 0 7 FUS POSTAR2 DRA001158,DRS012384 chr5:36152951-36152994
64251 chr20 32441367 32441367 1 + T C rs114112565 32441367 + 32441347 32441387 41 ACTGGGCTGGATCCATGTAATGGGGTCCAGCGCTGGCTGGG ACTGGGCTGGATCCATGTAACGGGGTCCAGCGCTGGCTGGG Direct Gain 0 0.974934276189644 0 0.979122638702393 prediction 0.949868552379287 Functional Gain - CHMP4B ENSG00000101421 UTR3 Human protein_coding chr20:32441367 chr20:32441367 . . 0 21 hm5C_associated_SNPs_130050 1 0 28 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:32441337-32441545
64251 chr9 103189560 103189560 1 + T C rs183786527 103189560 + 103189540 103189580 41 GCCGCCGCCGCCGCCCGGCGTTCGGGAGCCCGCGGCCCTCC GCCGCCGCCGCCGCCCGGCGCTCGGGAGCCCGCGGCCCTCC Direct Gain 0 0.974676437705388 0 0.492940187454224 prediction 0.949352875410777 Functional Gain - MSANTD3 ENSG00000066697 UTR5 Human protein_coding chr9:103189560 chr9:103189560 . . 0 21 hm5C_associated_SNPs_130061 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819215 chr9:103189560-103189561
64251 chr22 29168755 29168755 1 + T C rs11556025 29168755 + 29168735 29168775 41 GATCCGAGGCTGGCGGGTTTTGGCAGTAGCTGTGGCTGCGG GATCCGAGGCTGGCGGGTTTCGGCAGTAGCTGTGGCTGCGG Direct Gain 0 0.974500920248183 0 0.965194821357727 prediction 0.949001840496366 Functional Gain - CCDC117 ENSG00000159873 UTR5 Human protein_coding chr22:29168755 chr22:29168755 . . 0 21 hm5C_associated_SNPs_130070 0 0 13 ELAVL1 POSTAR2 GSE28865,GSM714640 chr22:29168716-29168760
64251 chr15 63481836 63481836 1 + T C COAD 63481836 + 63481816 63481856 41 GCGAGAAGATGGCGAAGACGTACGATTATCTCTTCAAGCTC GCGAGAAGATGGCGAAGACGCACGATTATCTCTTCAAGCTC Direct Gain 0 0.974272094703185 0 0.686713337898254 prediction 0.948544189406369 Functional Gain - RAB8B ENSG00000166128 CDS Human protein_coding chr15:63481836 chr15:63481836 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_130079 0 0 1 DDX3X POSTAR2 ENCODE chr15:63481784-63481936
64251 chr4 185570899 185570899 1 + T C rs4647600 185570899 + 185570879 185570919 41 ATTTGAAATCTAGGTCTTCCTGAGAGTCCGCGGGCTTCCGC ATTTGAAATCTAGGTCTTCCCGAGAGTCCGCGGGCTTCCGC Direct Gain 0 0.974217841220341 0 0.925030827522278 prediction 0.948435682440682 Functional Gain - PRIMPOL ENSG00000164306 UTR5 Human protein_coding chr4:185570899 chr4:185570899 . . 0 21 hm5C_associated_SNPs_130082 0 0 1 DDX3X POSTAR2 ENCODE chr4:185570895-185571023
64251 chr10 120863692 120863692 1 + T C rs143581957 120863692 + 120863672 120863712 41 GGCGGACACTCAGCTGATGCTTGGAGTCGGGCTGATCGGTG GGCGGACACTCAGCTGATGCCTGGAGTCGGGCTGATCGGTG Direct Gain 0 0.974174529516196 0 0.756062746047974 prediction 0.948349059032392 Functional Gain - FAM45A ENSG00000119979 CDS Human protein_coding chr10:120863692 chr10:120863692 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_130083 0 0 4 BUD13 POSTAR2 ENCODE chr10:120863689-120863784
64251 chr5 130506715 130506715 1 + T C SKCM 130506715 + 130506695 130506735 41 GGCCGCGGTGAGGAGAGCCATGGGACGGGCAGTCAAGGTGA GGCCGCGGTGAGGAGAGCCACGGGACGGGCAGTCAAGGTGA Direct Gain 0 0.974163623643551 0 0.823519766330719 prediction 0.948327247287103 Functional Gain - LYRM7 ENSG00000186687 CDS Human protein_coding chr5:130506715 chr5:130506715 nonsynonymous SNV 0.831 4 21 hm5C_associated_SNPs_130085 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr5:130506702-130506718
64251 chr6 130376371 130376371 1 + G C HNSC 130376371 + 130376351 130376391 41 GCAGAGAGCACGGAGGAAAAGACGAGGGGATTCGGCTGTAC GCAGAGAGCACGGAGGAAAACACGAGGGGATTCGGCTGTAC Direct Gain 0 0.974061050859823 0 0.375844389200211 prediction 0.948122101719645 Functional Gain - L3MBTL3 ENSG00000198945 CDS Human protein_coding chr6:130376371 chr6:130376371 nonsynonymous SNV 0.959 2 21 hm5C_associated_SNPs_130087 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:130376352-130376392
64251 chr3 101298701 101298701 1 + T C UCEC 101298701 + 101298681 101298721 41 TCCAGTAATGGAGGGGAAAGTTCCAGTCGCAGCGCTGAGAA TCCAGTAATGGAGGGGAAAGCTCCAGTCGCAGCGCTGAGAA Direct Gain 0 0.974053233068713 0 0.916463971138 prediction 0.948106466137427 Functional Gain - PCNP ENSG00000081154 CDS Human protein_coding chr3:101298701 chr3:101298701 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_130088 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:101298668-101298735
64251 chr12 132271113 132271113 1 + T C rs7136643 132271113 + 132271093 132271133 41 AGCCGCAGCCCTGGGGCCAGTAGGAAGCGGACCCGCTCCAG AGCCGCAGCCCTGGGGCCAGCAGGAAGCGGACCCGCTCCAG Direct Gain 0 0.97393417660645 0 0.891401946544647 prediction 0.947868353212901 Functional Gain - SFSWAP ENSG00000061936 CDS Human protein_coding chr12:132271113 chr12:132271113 synonymous SNV . 0 21 hm5C_associated_SNPs_130091 0 0 5 BUD13 POSTAR2 ENCODE chr12:132271085-132271125
64251 chr15 75641338 75641338 1 - C G LUAD 75641338 - 75641318 75641358 41 CCTCAGGGTTGCGGCTGACAGAGGACTTCTCCACGCAGCCG CCTCAGGGTTGCGGCTGACACAGGACTTCTCCACGCAGCCG Direct Gain 0 0.973895378419085 0 0.884985089302063 prediction 0.947790756838169 Functional Gain - NEIL1 ENSG00000140398 CDS Human protein_coding chr15:75641338 chr15:75641338 nonsynonymous SNV 0.043 1 21 hm5C_associated_SNPs_130093 0 0 3 HNRNPC POSTAR2 GSE56010,GSM1350197 chr15:75641330-75641351
64251 chr10 103920360 103920360 1 + G C LUSC 103920360 + 103920340 103920380 41 GGCGGTGGCCAGAAGCTTCTGACGAGAAAGGCTGACAGCAG GGCGGTGGCCAGAAGCTTCTCACGAGAAAGGCTGACAGCAG Direct Gain 0 0.973700172940974 0 0.802884459495544 prediction 0.947400345881949 Functional Gain - NOLC1 ENSG00000166197 CDS Human protein_coding chr10:103920360 chr10:103920360 synonymous SNV . 0 21 hm5C_associated_SNPs_130100 0 0 18 NCBP3 POSTAR2 GSE38201,GSM936507 chr10:103920337-103920360
64251 chr5 94891059 94891059 1 + G C rs61733082 94891059 + 94891039 94891079 41 CGGAGCAGGGGAGCAGAGGCGGAGAGCAGCCAAAGCGCCCA CGGAGCAGGGGAGCAGAGGCCGAGAGCAGCCAAAGCGCCCA Direct Gain 0 0.973520374925024 0 0.797449588775635 prediction 0.947040749850049 Functional Gain - ARSK ENSG00000164291 CDS Human protein_coding chr5:94891059 chr5:94891059 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_130104 0 0 2 DDX3X POSTAR2 ENCODE chr5:94890987-94891060
64251 chr19 54634980 54634980 1 + T C rs587720693 54634980 + 54634960 54635000 41 CCTGCCACTGGCCCCATTGCTGGGACTGCCCAGGGAGGAGG CCTGCCACTGGCCCCATTGCCGGGACTGCCCAGGGAGGAGG Direct Gain 0 0.973493320943914 0 0.877026379108429 prediction 0.946986641887828 Functional Gain - PRPF31 ENSG00000105618 UTR3 Human protein_coding chr19:54634980 chr19:54634980 . . 0 21 hm5C_associated_SNPs_130106 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr19:54634952-54634982
64251 chr17 30264357 30264357 1 + T C COAD 30264357 + 30264337 30264377 41 CTTCGGGGGTTCGGCGGCGGTGGCGGCGGCGACGGCTTCGG CTTCGGGGGTTCGGCGGCGGCGGCGGCGGCGACGGCTTCGG Direct Gain 0 0.972990929057669 0 0.890223562717438 prediction 0.945981858115338 Functional Gain - SUZ12 ENSG00000178691 CDS Human protein_coding chr17:30264357 chr17:30264357 nonsynonymous SNV 0.980 1 21 hm5C_associated_SNPs_130115 0 0 25 CSTF2T POSTAR2 ENCODE chr17:30264333-30264387
64251 chr12 77158068 77158068 1 + T C UCEC 77158068 + 77158048 77158088 41 TGGCGGACGGCCCGGATGAGTACGATACCGAAGCGGGCTGT TGGCGGACGGCCCGGATGAGCACGATACCGAAGCGGGCTGT Direct Gain 0 0.972826566877397 0 0.498633146286011 prediction 0.945653133754794 Functional Gain - ZDHHC17 ENSG00000186908 CDS Human protein_coding chr12:77158068 chr12:77158068 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130121 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819210 chr12:77158060-77158080
64251 chr6 26104332 26104332 1 + G C UCEC 26104332 + 26104312 26104352 41 GCATTTCCGGTCTTATCTATGAGGAGACTCGAGGTGTGCTT GCATTTCCGGTCTTATCTATCAGGAGACTCGAGGTGTGCTT Direct Gain 0 0.972776949820355 0 0.970421552658081 prediction 0.94555389964071 Functional Gain - HIST1H4C ENSG00000197061 CDS Human protein_coding chr6:26104332 chr6:26104332 nonsynonymous SNV 0.531 2 21 hm5C_associated_SNPs_130124 0 0 64 DDX3X POSTAR2 GSE70804,GSM1819212 chr6:26104160-26104340
64251 chr5 178293284 178293284 1 + T C rs567321883 178293284 + 178293264 178293304 41 ACGTGGCTGTGCTCTTTACCTGGGATGAGTGGAGAAAGCTG ACGTGGCTGTGCTCTTTACCCGGGATGAGTGGAGAAAGCTG Direct Gain 0 0.972480695591558 0 0.914090871810913 prediction 0.944961391183117 Functional Gain - ZNF354B ENSG00000178338 CDS Human protein_coding chr5:178293284 chr5:178293284 nonsynonymous SNV 0.116 0 21 hm5C_associated_SNPs_130132 0 0 6 TARDBP POSTAR2 DRA001158,DRS012387 chr5:178293263-178293287
64251 chr11 66258775 66258775 1 + G C SKCM 66258775 + 66258755 66258795 41 GCTGAAGAGCTATGAATTCCGGGGAAGCCCTTTCCAGGTGA GCTGAAGAGCTATGAATTCCCGGGAAGCCCTTTCCAGGTGA Direct Gain 0 0.972397951546954 0 0.888719439506531 prediction 0.944795903093908 Functional Gain - DPP3 ENSG00000254986 CDS Human protein_coding chr11:66258775 chr11:66258775 nonsynonymous SNV 0.939 0 21 hm5C_associated_SNPs_130134 0 0 1 DDX6 POSTAR2 ENCODE chr11:66258716-66258790
64251 chr19 39875332 39875332 1 + G C rs560640005 39875332 + 39875312 39875352 41 CAGGTGGAGGGAGGGGATTTGGGGGTTCAGACTGCGGGGAA CAGGTGGAGGGAGGGGATTTCGGGGTTCAGACTGCGGGGAA Direct Gain 0 0.97210798063031 0 0.953312039375305 prediction 0.944215961260621 Functional Gain - SAMD4B ENSG00000179134 UTR3 Human protein_coding chr19:39875332 chr19:39875332 . . 0 21 hm5C_associated_SNPs_130145 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:39875278-39875374
64251 chr3 139062910 139062910 1 + G C BLCA 139062910 + 139062890 139062930 41 GTATTGCTGTGGAGCCTCTTGAGGAGTTCTCCGGGCGTGGA GTATTGCTGTGGAGCCTCTTCAGGAGTTCTCCGGGCGTGGA Direct Gain 0 0.971996607215852 0 0.947601675987244 prediction 0.943993214431704 Functional Gain - MRPS22 ENSG00000175110 CDS Human protein_coding chr3:139062910 chr3:139062910 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_130148 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012390 chr3:139062892-139062929
64251 chr16 29809711 29809711 1 + G C LUAD 29809711 + 29809691 29809731 41 GCAGGTTTGATGCCTTCTATGGGGAGAGGAGTACTCAGCAG GCAGGTTTGATGCCTTCTATCGGGAGAGGAGTACTCAGCAG Direct Gain 0 0.971812535916937 0 0.987464547157288 prediction 0.943625071833873 Functional Gain - KIF22 ENSG00000079616 CDS Human protein_coding chr16:29809711 chr16:29809711 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_130155 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:29809700-29809720
64251 chr1 57347200 57347200 1 + G C BLCA 57347200 + 57347180 57347220 41 AGTGTGAGACGGTATACAATGGGGAATGGAGGGAGCTTCGA AGTGTGAGACGGTATACAATCGGGAATGGAGGGAGCTTCGA Direct Gain 0 0.971709021505372 0 0.844014644622803 prediction 0.943418043010744 Functional Gain - C8A ENSG00000157131 CDS Human protein_coding chr1:57347200 chr1:57347200 nonsynonymous SNV 0.973 4 21 hm5C_associated_SNPs_130156 0 0 2 LIN28B POSTAR2 ENCODE chr1:57347194-57347264
64251 chr3 133524738 133524738 1 + G C DLBC 133524738 + 133524718 133524758 41 TGGCAGATGGCGGCGGTGCCGGGGGCACCTTCCAGCCCTAC TGGCAGATGGCGGCGGTGCCCGGGGCACCTTCCAGCCCTAC Direct Gain 0 0.971525090233696 0 0.926037073135376 prediction 0.943050180467393 Functional Gain - SRPRB ENSG00000144867 CDS Human protein_coding chr3:133524738 chr3:133524738 nonsynonymous SNV 0.181 0 21 hm5C_associated_SNPs_130164 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr3:133524717-133524759
64251 chr11 67377958 67377958 1 + G C BLCA 67377958 + 67377938 67377978 41 CGGGGCTGGGGCCTACATCTGTGGAGAGGAGACAGCGCTCA CGGGGCTGGGGCCTACATCTCTGGAGAGGAGACAGCGCTCA Direct Gain 0 0.971448011093533 0 0.942551851272583 prediction 0.942896022187065 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67377958 chr11:67377958 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_130166 0 0 15 TARDBP POSTAR2 DRA001158,DRS012387 chr11:67377876-67377958
64251 chr17 73518335 73518335 1 + G C rs577958629 73518335 + 73518315 73518355 41 CTGCAGCGGCGGCAGGTGCAGAGGAGCCAGCGCCGGGCCCC CTGCAGCGGCGGCAGGTGCACAGGAGCCAGCGCCGGGCCCC Direct Gain 0 0.971420364920546 0 0.841316878795624 prediction 0.942840729841092 Functional Gain - TSEN54 ENSG00000182173 CDS Human protein_coding chr17:73518335 chr17:73518335 nonsynonymous SNV 0.028 1 21 hm5C_associated_SNPs_130167 0 0 1 BUD13 POSTAR2 ENCODE chr17:73518292-73518416
64251 chr20 61436347 61436347 1 + G C rs560795439 61436347 + 61436327 61436367 41 GGGACGAGGACGAGGAGTCGGAGGAGCCGCGGGCGGCGCGG GGGACGAGGACGAGGAGTCGCAGGAGCCGCGGGCGGCGCGG Direct Gain 0 0.971398915406765 0 0.948953866958618 prediction 0.942797830813531 Functional Gain - OGFR ENSG00000060491 CDS Human protein_coding chr20:61436347 chr20:61436347 nonsynonymous SNV 0.246 0 21 hm5C_associated_SNPs_130169 0 0 11 BUD13 POSTAR2 ENCODE chr20:61436334-61436433
64251 chr2 220097300 220097300 1 + T C UCEC 220097300 + 220097280 220097320 41 GATCGGGAGAGGGCTACATTTGAGAAGTTGAGCCGACCCCC GATCGGGAGAGGGCTACATTCGAGAAGTTGAGCCGACCCCC Direct Gain 0 0.971146618953748 0 0.943705677986145 prediction 0.942293237907496 Functional Gain - ANKZF1 ENSG00000163516 CDS Human protein_coding chr2:220097300 chr2:220097300 synonymous SNV . 0 21 hm5C_associated_SNPs_130175 0 0 11 BUD13 POSTAR2 ENCODE chr2:220097222-220097321
64251 chr10 134351406 134351406 1 + A C rs540258601 134351406 + 134351386 134351426 41 CGGGCGCGGGGCCGCGGAGCAGCGAGCGAGCGAGCGAGCGC CGGGCGCGGGGCCGCGGAGCCGCGAGCGAGCGAGCGAGCGC Direct Gain 0 0.971084748041463 0 0.754539132118225 prediction 0.942169496082926 Functional Gain - INPP5A ENSG00000068383 UTR5 Human protein_coding chr10:134351406 chr10:134351406 . . 0 21 hm5C_associated_SNPs_130176 0 0 1 PPIG POSTAR2 ENCODE chr10:134351343-134351420
64251 chr4 75959144 75959144 1 + T C SKCM 75959144 + 75959124 75959164 41 TGCCGTGGTGCTGCTGGTGTTTGGAGTTGCAGCCTACCTAA TGCCGTGGTGCTGCTGGTGTCTGGAGTTGCAGCCTACCTAA Direct Gain 0 0.97070437039603 0 0.872188925743103 prediction 0.94140874079206 Functional Gain - PARM1 ENSG00000169116 CDS Human protein_coding chr4:75959144 chr4:75959144 nonsynonymous SNV 0.927 4 21 hm5C_associated_SNPs_130184 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:75959122-75959146
64251 chr6 155577773 155577773 1 - A G STAD 155577773 - 155577753 155577793 41 TTTCCCGGGAGAAGTGCTCTTGGAGTCCTGCCTGCCCTCAG TTTCCCGGGAGAAGTGCTCTCGGAGTCCTGCCTGCCCTCAG Direct Gain 0 0.970684694795925 0 0.97629451751709 prediction 0.94136938959185 Functional Gain - TIAM2 ENSG00000146426 CDS Human protein_coding chr6:155577773 chr6:155577773 nonsynonymous SNV 0.088 0 21 hm5C_associated_SNPs_130186 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:155577763-155577804
64251 chr16 2524140 2524140 1 - A G rs182426816 2524140 - 2524120 2524160 41 GGTGAACGTGCGCCTAGATGTGGGAGCAGCGGCCGCCCTGC GGTGAACGTGCGCCTAGATGCGGGAGCAGCGGCCGCCCTGC Direct Gain 0 0.970667126800212 0 0.955430030822754 prediction 0.941334253600425 Functional Gain - NTN3 ENSG00000162068 UTR3 Human protein_coding chr16:2524140 chr16:2524140 . . 0 21 hm5C_associated_SNPs_130188 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr16:2524140-2524165
64251 chrX 147026500 147026500 1 + G C LUSC 147026500 + 147026480 147026520 41 GAGGGAGAGCTTCCTGCGCAGAGGAGACGGACGGCGGCGTG GAGGGAGAGCTTCCTGCGCACAGGAGACGGACGGCGGCGTG Direct Gain 0 0.970073209658502 0 0.837321996688843 prediction 0.940146419317004 Functional Gain - FMR1 ENSG00000102081 CDS Human protein_coding chrX:147026500 chrX:147026500 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_130207 0 0 14 FMR1 POSTAR2 GSE39682,GSM977615 chrX:147026386-147026525
64251 chr14 32030722 32030722 1 + G C rs77539990 32030722 + 32030702 32030742 41 CGGGGCCACTGCCCCGCTTGGGGGAAGCCGAGCGATGGTTT CGGGGCCACTGCCCCGCTTGCGGGAAGCCGAGCGATGGTTT Direct Gain 0 0.969868946966008 0 0.943747043609619 prediction 0.939737893932016 Functional Gain - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32030722 chr14:32030722 nonsynonymous SNV 0.005 0 21 hm5C_associated_SNPs_130214 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr14:32030698-32030738
64251 chr6 122720937 122720937 1 + G C BLCA 122720937 + 122720917 122720957 41 GCAAGCTGTGGACGCTTGTGGAGGAAACCCACACTAACGAG GCAAGCTGTGGACGCTTGTGCAGGAAACCCACACTAACGAG Direct Gain 0 0.969592646258449 0 0.825771808624268 prediction 0.939185292516897 Functional Gain - HSF2 ENSG00000025156 CDS Human protein_coding chr6:122720937 chr6:122720937 nonsynonymous SNV 0.997 3 21 hm5C_associated_SNPs_130228 0 0 4 FXR2 POSTAR2 GSE39682,GSM977620 chr6:122720927-122720953
64251 chr11 67376948 67376948 1 + G C HNSC 67376948 + 67376928 67376968 41 AGTATCTGGTGGTGAACGCAGACGAGGGGGAGCCGGGCACC AGTATCTGGTGGTGAACGCACACGAGGGGGAGCCGGGCACC Direct Gain 0 0.969521807341792 0 0.724207282066345 prediction 0.939043614683583 Functional Gain - NDUFV1 ENSG00000167792 CDS Human protein_coding chr11:67376948 chr11:67376948 nonsynonymous SNV 0.935 5 21 hm5C_associated_SNPs_130230 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:67376938-67376970
64251 chr11 764854 764854 1 + T C rs7939103 764854 + 764834 764874 41 AATGGAAAGTAGCGCATCCCTGAGGCTGGACTCCAGATCTG AATGGAAAGTAGCGCATCCCCGAGGCTGGACTCCAGATCTG Direct Gain 0 0.969396615470314 0 0.80142730474472 prediction 0.938793230940628 Functional Gain - TALDO1 ENSG00000177156 UTR3 Human protein_coding chr11:764854 chr11:764854 . . 0 21 hm5C_associated_SNPs_130234 1 0 21 DGCR8 POSTAR2 GSE39086,GSM955513 chr11:764820-764860
64251 chr5 33453497 33453497 1 + G C LUAD 33453497 + 33453477 33453517 41 CCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCA CCTTGGAGCTTCTCAAGTTTCAGGATGAGGAAGCTCAGGCA Direct Gain 0 0.969258087476541 0 0.926743507385254 prediction 0.938516174953083 Functional Gain - TARS ENSG00000113407 CDS Human protein_coding chr5:33453497 chr5:33453497 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130238 0 0 19 NUDT21 POSTAR2 GSE37401,GSM917662 chr5:33453420-33453500
64251 chr4 8621216 8621216 1 + G C TGCT 8621216 + 8621196 8621236 41 TGGGAGGTGCCAGCTCTTTGGGGGAGGCCACGGAGCCCGAC TGGGAGGTGCCAGCTCTTTGCGGGAGGCCACGGAGCCCGAC Direct Gain 0 0.968967013430882 0 0.968149840831757 prediction 0.937934026861764 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8621216 chr4:8621216 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_130243 0 0 2 SND1 POSTAR2 ENCODE chr4:8621163-8621269
64251 chr16 20911785 20911785 1 + G C rs150589892 20911785 + 20911765 20911805 41 CAGCTCCAGGAGGGAGAATGGGAGAGGGGCAAGGAGGGAAC CAGCTCCAGGAGGGAGAATGCGAGAGGGGCAAGGAGGGAAC Direct Gain 0 0.968895810372894 0 0.856296360492706 prediction 0.937791620745787 Functional Gain - LYRM1 ENSG00000102897 UTR5 Human protein_coding chr16:20911785 chr16:20911785 . . 0 21 hm5C_associated_SNPs_130246 0 0 1 CSTF2T POSTAR2 GSE37401,GSM917677 chr16:20911765-20911801
64251 chr9 138378954 138378954 1 + T C rs61735037 138378954 + 138378934 138378974 41 GCAGAGGGCCCCACCGCTCTTGGGACAGGGGGCCCAGCCAG GCAGAGGGCCCCACCGCTCTCGGGACAGGGGGCCCAGCCAG Direct Gain 0 0.968609094637901 0 0.955157816410065 prediction 0.937218189275801 Functional Gain - PPP1R26 ENSG00000196422 CDS Human protein_coding chr9:138378954 chr9:138378954 synonymous SNV . 0 21 hm5C_associated_SNPs_130254 0 0 6 FXR2 POSTAR2 ENCODE chr9:138378934-138378984
64251 chr1 246729990 246729990 1 + A C rs3795474 246729990 + 246729970 246730010 41 GGAGAGGAGGAGCGGGATGCAGGGGACCCGCCGGCTCGCGG GGAGAGGAGGAGCGGGATGCCGGGGACCCGCCGGCTCGCGG Direct Gain 0 0.968600183230266 0 0.975498974323273 prediction 0.937200366460533 Functional Gain - CNST ENSG00000162852 UTR5 Human protein_coding chr1:246729990 chr1:246729990 . . 0 21 hm5C_associated_SNPs_130255 0 0 1 PRPF8 POSTAR2 ENCODE chr1:246729943-246730008
64251 chr5 8457852 8457852 1 + A C rs559131234 8457852 + 8457832 8457872 41 GGGAGGAGGTCGCGCTGTCCATGGGCGTCCTTGGCCTGCGC GGGAGGAGGTCGCGCTGTCCCTGGGCGTCCTTGGCCTGCGC Direct Gain 0 0.968340350676557 0 0.828224897384644 prediction 0.936680701353114 Functional Gain - MIR4458HG ENSG00000247516 ncRNA_exonic Human lincRNA chr5:8457852 chr5:8457852 . . 0 21 hm5C_associated_SNPs_130265 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819210 chr5:8457820-8457860
64251 chr1 219347247 219347247 1 + G C LUAD 219347247 + 219347227 219347267 41 TCAGCGATGGCGGCTGCGTCGGGGTCGGTTCTGCAGCGCTG TCAGCGATGGCGGCTGCGTCCGGGTCGGTTCTGCAGCGCTG Direct Gain 0 0.968235379569493 0 0.892237782478333 prediction 0.936470759138986 Functional Gain - LYPLAL1 ENSG00000143353 CDS Human protein_coding chr1:219347247 chr1:219347247 synonymous SNV . 0 21 hm5C_associated_SNPs_130270 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350198 chr1:219347228-219347260
64251 chr19 12296615 12296615 1 + G C HNSC 12296615 + 12296595 12296635 41 TTCAGGACTCGGTGGCTTTTGAGGATGTAGATGTGAACTTC TTCAGGACTCGGTGGCTTTTCAGGATGTAGATGTGAACTTC Direct Gain 0 0.968190765476471 0 0.928457617759705 prediction 0.936381530952942 Functional Gain - ZNF136 ENSG00000196646 CDS Human protein_coding chr19:12296615 chr19:12296615 nonsynonymous SNV 0.786 3 21 hm5C_associated_SNPs_130272 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr19:12296590-12296615
64251 chr15 49170407 49170407 1 + G C HNSC 49170407 + 49170387 49170427 41 CTGAGTTGTCCGAGCTGTATGAAGAGAGCAGTGACCTGCAG CTGAGTTGTCCGAGCTGTATCAAGAGAGCAGTGACCTGCAG Direct Gain 0 0.968180981601432 0 0.893294215202332 prediction 0.936361963202863 Functional Gain - EID1 ENSG00000255302 CDS Human protein_coding chr15:49170407 chr15:49170407 nonsynonymous SNV 0.802 3 21 hm5C_associated_SNPs_130273 0 0 32 CPSF6 POSTAR2 GSE37401,GSM917665 chr15:49170315-49170447
64251 chr4 52709382 52709382 1 + G C rs557754859 52709382 + 52709362 52709402 41 GCGAGCGCGGGAGCCTGGGCGGCGAGCCGGGTGTGAGCTGC GCGAGCGCGGGAGCCTGGGCCGCGAGCCGGGTGTGAGCTGC Direct Gain 0 0.968175975107487 0 0.917407035827637 prediction 0.936351950214973 Functional Gain - DCUN1D4 ENSG00000109184 UTR5 Human protein_coding chr4:52709382 chr4:52709382 . . 0 21 hm5C_associated_SNPs_130274 0 0 10 CSTF2T POSTAR2 ENCODE chr4:52709346-52709400
64251 chr19 45412238 45412238 1 + G C COAD 45412238 + 45412218 45412258 41 AGGAGCGGGCCCAGGCCTGGGGCGAGCGGCTGCGCGCGCGG AGGAGCGGGCCCAGGCCTGGCGCGAGCGGCTGCGCGCGCGG Direct Gain 0 0.967972124133834 0 0.748048424720764 prediction 0.935944248267669 Functional Gain - APOE ENSG00000130203 CDS Human protein_coding chr19:45412238 chr19:45412238 nonsynonymous SNV 0.009 0 21 hm5C_associated_SNPs_130277 0 0 12 DDX55 POSTAR2 ENCODE chr19:45412214-45412353
64251 chr11 58346912 58346912 1 + G C rs530045042 58346912 + 58346892 58346932 41 CAGCCGCGTGCTGAGGGGAGGTCGGGACCGAGGCCGGGCCG CAGCCGCGTGCTGAGGGGAGCTCGGGACCGAGGCCGGGCCG Direct Gain 0 0.967863073891711 0 0.469484925270081 prediction 0.935726147783422 Functional Gain - ZFP91 ENSG00000186660;ENSG00000255073 CDS Human other chr11:58346912 chr11:58346912 nonsynonymous SNV 0.990 1 21 hm5C_associated_SNPs_130280 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350196 chr11:58346892-58346920
64251 chr18 12725500 12725500 1 + T C BLCA 12725500 + 12725480 12725520 41 AGTTCTTGGAGATTACTCTTTGGCAGTGGTCTTCCCCCTGC AGTTCTTGGAGATTACTCTTCGGCAGTGGTCTTCCCCCTGC Direct Gain 0 0.967811213373706 0 0.672155022621155 prediction 0.935622426747413 Functional Gain - PSMG2 ENSG00000128789 CDS Human protein_coding chr18:12725500 chr18:12725500 synonymous SNV . 0 21 hm5C_associated_SNPs_130283 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr18:12725490-12725518
64251 chr20 44420682 44420682 1 + T C rs2664591 44420682 + 44420662 44420702 41 GCCGAGCAGCCGCGGGGACCTAGCGGGGCCGAGAGGGGCGG GCCGAGCAGCCGCGGGGACCCAGCGGGGCCGAGAGGGGCGG Direct Gain 0 0.967773991471065 0 0.829684615135193 prediction 0.935547982942131 Functional Gain - DNTTIP1 ENSG00000101457 CDS Human protein_coding chr20:44420682 chr20:44420682 synonymous SNV . 0 21 hm5C_associated_SNPs_130285 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr20:44420682-44420683
64251 chr15 76496340 76496340 1 - C G rs937733 76496340 - 76496320 76496360 41 GCTGCTGGGATGGCAGCGGCGGGGGAGAAGGGCCGGGCTCA GCTGCTGGGATGGCAGCGGCCGGGGAGAAGGGCCGGGCTCA Direct Gain 0 0.967540708179564 0 0.979872345924377 prediction 0.935081416359128 Functional Gain - TMEM266 ENSG00000169758 CDS Human protein_coding chr15:76496340 chr15:76496340 nonsynonymous SNV 0.013 0 21 hm5C_associated_SNPs_130292 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917674 chr15:76496337-76496375
64251 chr1 220316379 220316379 1 + T C UCEC 220316379 + 220316359 220316399 41 TGTGGAGAGTGCGTGTGCAATGCGAGACTCATTTCTTGGAA TGTGGAGAGTGCGTGTGCAACGCGAGACTCATTTCTTGGAA Direct Gain 0 0.967525025624295 0 0.779182553291321 prediction 0.935050051248591 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220316379 chr1:220316379 nonsynonymous SNV 0.776 1 21 hm5C_associated_SNPs_130294 0 0 9 FUS POSTAR2 DRA001158,DRS012384 chr1:220316339-220316388
64251 chr7 155090096 155090096 1 + T C PAAD 155090096 + 155090076 155090116 41 CGCGGGGCTGGCGGCCAAGGTTGGGGAGATGATCAACGTTT CGCGGGGCTGGCGGCCAAGGCTGGGGAGATGATCAACGTTT Direct Gain 0 0.967393622334308 0 0.652908563613892 prediction 0.934787244668615 Functional Gain - INSIG1 ENSG00000186480 CDS Human protein_coding chr7:155090096 chr7:155090096 nonsynonymous SNV 0.066 0 21 hm5C_associated_SNPs_130302 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819215 chr7:155090040-155090120
64251 chr14 32030678 32030678 1 + T C LIHC 32030678 + 32030658 32030698 41 CAGCGTCTGCTGCTTTTTGGTGGGGTGTCGCTCCGGGCTGG CAGCGTCTGCTGCTTTTTGGCGGGGTGTCGCTCCGGGCTGG Direct Gain 0 0.967392993495307 0 0.93347704410553 prediction 0.934785986990614 Functional Gain - NUBPL ENSG00000151413 CDS Human protein_coding chr14:32030678 chr14:32030678 synonymous SNV . 0 21 hm5C_associated_SNPs_130303 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr14:32030660-32030680
64251 chr5 122110827 122110827 1 + T C COAD 122110827 + 122110807 122110847 41 CGAGAGGGAACCTCCTCCGCTGGGGGACGGGAAGCCCACCG CGAGAGGGAACCTCCTCCGCCGGGGGACGGGAAGCCCACCG Direct Gain 0 0.967329346743732 0 0.90629243850708 prediction 0.934658693487464 Functional Gain - SNX2 ENSG00000205302 CDS Human protein_coding chr5:122110827 chr5:122110827 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_130304 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr5:122110825-122110853
64251 chr19 36113809 36113809 1 + G C LUSC 36113809 + 36113789 36113829 41 CAGGCCAGGCCGCCCTCTCTGAGGAGCTCTGCCAGGGCCTG CAGGCCAGGCCGCCCTCTCTCAGGAGCTCTGCCAGGGCCTG Direct Gain 0 0.967188078617563 0 0.967785775661469 prediction 0.934376157235126 Functional Gain - HAUS5 ENSG00000249115 CDS Human protein_coding chr19:36113809 chr19:36113809 nonsynonymous SNV 0.106 0 21 hm5C_associated_SNPs_130312 0 0 4 BUD13 POSTAR2 ENCODE chr19:36113776-36113811
64251 chr10 45498926 45498926 1 + T C HNSC 45498926 + 45498906 45498946 41 GCAGAAGTGGGGCATGACTATTCGATTTGACTCAAGCTTCA GCAGAAGTGGGGCATGACTACTCGATTTGACTCAAGCTTCA Direct Gain 0 0.967072323609885 0 0.335662871599197 prediction 0.93414464721977 Functional Gain - ZNF22 ENSG00000165512 CDS Human protein_coding chr10:45498926 chr10:45498926 nonsynonymous SNV 0.820 0 21 hm5C_associated_SNPs_130314 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr10:45498920-45498940
64251 chr14 24109065 24109065 1 + A C rs116189534 24109065 + 24109045 24109085 41 GCAGGGGTCAACCCTCTGGTAGGGAGCACTCTGGGGACCAG GCAGGGGTCAACCCTCTGGTCGGGAGCACTCTGGGGACCAG Direct Gain 0 0.967060657076821 0 0.829508662223816 prediction 0.934121314153643 Functional Gain - DHRS2 ENSG00000100867 CDS Human protein_coding chr14:24109065 chr14:24109065 synonymous SNV . 0 21 hm5C_associated_SNPs_130315 0 0 13 DDX24 POSTAR2 ENCODE chr14:24109008-24109096
64251 chr20 33026330 33026330 1 + T C GBM 33026330 + 33026310 33026350 41 GATGCAGGAGCTGGTGAAAATAGGAGAGTCAGTGGGAATAA GATGCAGGAGCTGGTGAAAACAGGAGAGTCAGTGGGAATAA Direct Gain 0 0.966902566589533 0 0.753625750541687 prediction 0.933805133179065 Functional Gain - ITCH ENSG00000078747 CDS Human protein_coding chr20:33026330 chr20:33026330 synonymous SNV . 0 21 hm5C_associated_SNPs_130319 0 0 6 NUDT21 POSTAR2 GSE37401,GSM917661 chr20:33026297-33026331
64251 chr15 59347914 59347914 1 + T C rs138658453 59347914 + 59347894 59347934 41 CTTGGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTC CTTGGACACTCCAGATCTCACTGGAGCCAGGGTTCCAGTTC Direct Gain 0 0.966606611472917 0 0.832375228404999 prediction 0.933213222945834 Functional Gain - RNF111 ENSG00000157450 CDS Human protein_coding chr15:59347914 chr15:59347914 synonymous SNV . 0 21 hm5C_associated_SNPs_130325 0 0 4 FMR1 POSTAR2 GSE39682,GSM977615 chr15:59347907-59347929
64251 chr6 24403411 24403411 1 + T C rs146260219 24403411 + 24403391 24403431 41 CGGCCGCCGAGCCAACCTGATTGGAAGGAGCCGAGCGGCGC CGGCCGCCGAGCCAACCTGACTGGAAGGAGCCGAGCGGCGC Direct Gain 0 0.966597997979899 0 0.349615931510925 prediction 0.933195995959799 Functional Gain - MRS2 ENSG00000124532 CDS Human protein_coding chr6:24403411 chr6:24403411 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_130326 0 0 4 DDX3X POSTAR2 ENCODE chr6:24403362-24403411
64251 chr16 67662336 67662336 1 + T C STAD 67662336 + 67662316 67662356 41 AGCCTTACGCCTGCAGCCACTGCGATAAGACCTTCCGCCAG AGCCTTACGCCTGCAGCCACCGCGATAAGACCTTCCGCCAG Direct Gain 0 0.96653917249892 0 0.965506792068481 prediction 0.93307834499784 Functional Gain - CTCF ENSG00000102974 CDS Human protein_coding chr16:67662336 chr16:67662336 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_130328 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr16:67662320-67662340
64251 chr18 21739766 21739766 1 + T C COAD 21739766 + 21739746 21739786 41 GTCAGATGTCTTGAGATATGTTGCAATGCAAGTGCCCATTG GTCAGATGTCTTGAGATATGCTGCAATGCAAGTGCCCATTG Direct Gain 0 0.966355381206513 0 0.30334261059761 prediction 0.932710762413026 Functional Gain - CABYR ENSG00000154040 CDS Human protein_coding chr18:21739766 chr18:21739766 nonsynonymous SNV 0.931 0 21 hm5C_associated_SNPs_130341 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:21739750-21739779
64251 chr21 18885390 18885390 1 + T C rs151262120 18885390 + 18885370 18885410 41 CGCGCGAGGCGCGGGGAGCCTGGGACCAGGAGCGAGAGCCG CGCGCGAGGCGCGGGGAGCCCGGGACCAGGAGCGAGAGCCG Direct Gain 0 0.965774726764511 0 0.968653798103333 prediction 0.931549453529022 Functional Gain - CXADR ENSG00000154639 UTR5 Human protein_coding chr21:18885390 chr21:18885390 . . 0 21 hm5C_associated_SNPs_130361 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819215 chr21:18885360-18885400
64251 chr7 98951628 98951628 1 + T C HNSC 98951628 + 98951608 98951648 41 CAGCTGATGTCAGAGTTTGGTGGCAGTGGCACTGGTGGCTG CAGCTGATGTCAGAGTTTGGCGGCAGTGGCACTGGTGGCTG Direct Gain 0 0.965766859239683 0 0.928581237792969 prediction 0.931533718479365 Functional Gain - ARPC1A ENSG00000241685 CDS Human protein_coding chr7:98951628 chr7:98951628 synonymous SNV . 0 21 hm5C_associated_SNPs_130362 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:98951618-98951671
64251 chr11 43702530 43702530 1 + A C rs56168061 43702530 + 43702510 43702550 41 GTCGGCCCGGGGCTCGGAGAATGGGCAGGTGAGTCGGATGC GTCGGCCCGGGGCTCGGAGACTGGGCAGGTGAGTCGGATGC Direct Gain 0 0.965628950038006 0 0.516914486885071 prediction 0.931257900076012 Functional Gain - HSD17B12 ENSG00000149084 CDS Human protein_coding chr11:43702530 chr11:43702530 nonsynonymous SNV 0.994 1 21 hm5C_associated_SNPs_130365 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr11:43702514-43702537
64251 chr12 12870888 12870888 1 + G C LUAD 12870888 + 12870868 12870908 41 TCTTCGGCCCGGTGGACCACGAAGAGTTAACCCGGGACTTG TCTTCGGCCCGGTGGACCACCAAGAGTTAACCCGGGACTTG Direct Gain 0 0.965481224406744 0 0.729166626930237 prediction 0.930962448813487 Functional Gain - CDKN1B ENSG00000111276 CDS Human protein_coding chr12:12870888 chr12:12870888 nonsynonymous SNV 0.997 2 21 hm5C_associated_SNPs_130372 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:12870857-12870954
64251 chr14 39650731 39650731 1 + T C PAAD 39650731 + 39650711 39650751 41 AGTAGTAGCAGTCGCAGTAGTTCCAGTAGCAGCTCCAGTAC AGTAGTAGCAGTCGCAGTAGCTCCAGTAGCAGCTCCAGTAC Direct Gain 0 0.965350610370833 0 0.95658266544342 prediction 0.930701220741666 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650731 chr14:39650731 synonymous SNV . 0 21 hm5C_associated_SNPs_130377 0 0 29 ATXN2 POSTAR2 DRA001158,DRS012391 chr14:39650430-39651061
64251 chrX 118377149 118377149 1 + G C rs202113314 118377149 + 118377129 118377169 41 TGGGCAAACTGCTGAAGGAGGGGGAGGAGCCCACTGTGTAC TGGGCAAACTGCTGAAGGAGCGGGAGGAGCCCACTGTGTAC Direct Gain 0 0.965166414486239 0 0.858601212501526 prediction 0.930332828972478 Functional Gain - PGRMC1 ENSG00000101856 CDS Human protein_coding chrX:118377149 chrX:118377149 nonsynonymous SNV 0.991 4 21 hm5C_associated_SNPs_130385 0 0 18 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:118377118-118377186
64251 chr14 23315054 23315054 1 + G C LUAD 23315054 + 23315034 23315074 41 GCCGGCCGGATGAGGGGACTGAGGAGGAGACGGAGGTGATC GCCGGCCGGATGAGGGGACTCAGGAGGAGACGGAGGTGATC Direct Gain 0 0.9650974869863 0 0.92896044254303 prediction 0.930194973972601 Functional Gain - MMP14 ENSG00000157227 CDS Human protein_coding chr14:23315054 chr14:23315054 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130386 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:23315045-23315071
64251 chr6 42984935 42984935 1 + T C UCEC 42984935 + 42984915 42984955 41 ACCAGTGGCCCAGGGGATGTTACGGTGGACAGTGCACCTGG ACCAGTGGCCCAGGGGATGTCACGGTGGACAGTGCACCTGG Direct Gain 0 0.965036742339864 0 0.794003367424011 prediction 0.930073484679729 Functional Gain - KLHDC3 ENSG00000124702 CDS Human protein_coding chr6:42984935 chr6:42984935 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130388 0 0 18 FIP1L1 POSTAR2 GSE37401,GSM917675 chr6:42984906-42984944
64251 chr5 140048717 140048717 1 + T C UCEC 140048717 + 140048697 140048737 41 GGTACCATCTACCTCTTCAATTGGAATGGCTTTGGGGCCAC GGTACCATCTACCTCTTCAACTGGAATGGCTTTGGGGCCAC Direct Gain 0 0.964972379158092 0 0.840711116790771 prediction 0.929944758316184 Functional Gain - WDR55 ENSG00000120314 CDS Human protein_coding chr5:140048717 chr5:140048717 synonymous SNV . 0 21 hm5C_associated_SNPs_130391 0 0 1 BUD13 POSTAR2 ENCODE chr5:140048703-140048779
64251 chr3 57542199 57542199 1 + G C rs61747701 57542199 + 57542179 57542219 41 GAAGCGGGGAGCCAGACAGCGGCGGGAGCGATGGAGCGCGC GAAGCGGGGAGCCAGACAGCCGCGGGAGCGATGGAGCGCGC Direct Gain 0 0.96492062696975 0 0.691857635974884 prediction 0.9298412539395 Functional Gain - PDE12 ENSG00000174840 CDS Human protein_coding chr3:57542199 chr3:57542199 synonymous SNV . 0 21 hm5C_associated_SNPs_130394 0 0 1 DDX3X POSTAR2 ENCODE chr3:57542174-57542213
64251 chr5 139494400 139494400 1 + G C CESC 139494400 + 139494380 139494420 41 TCATCGACGACTACGGAGTGGAGGAGGAGCCGGCCGAGCTG TCATCGACGACTACGGAGTGCAGGAGGAGCCGGCCGAGCTG Direct Gain 0 0.964858051590175 0 0.540230274200439 prediction 0.92971610318035 Functional Gain - PURA ENSG00000185129 CDS Human protein_coding chr5:139494400 chr5:139494400 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130397 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr5:139494380-139494400
64251 chr16 58550386 58550386 1 + G C CESC 58550386 + 58550366 58550406 41 GTGGGTGTCCCTGCAGGCCAGAGGAGGAGCGCCGGTGCCTG GTGGGTGTCCCTGCAGGCCACAGGAGGAGCGCCGGTGCCTG Direct Gain 0 0.964830922861574 0 0.87308669090271 prediction 0.929661845723148 Functional Gain - SETD6 ENSG00000103037 CDS Human protein_coding chr16:58550386 chr16:58550386 nonsynonymous SNV 0.994 1 21 hm5C_associated_SNPs_130398 0 0 6 DDX55 POSTAR2 ENCODE chr16:58550365-58550410
64251 chr5 36152994 36152994 1 + G C LUAD 36152994 + 36152974 36153014 41 GGGTCTCCGCCCTGGAGAAAGAGGAGCCCGACAGTGAGAAC GGGTCTCCGCCCTGGAGAAACAGGAGCCCGACAGTGAGAAC Direct Gain 0 0.964791364046496 0 0.872489094734192 prediction 0.929582728092991 Functional Gain - SKP2 ENSG00000145604 CDS Human protein_coding chr5:36152994 chr5:36152994 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_130399 0 0 8 FUS POSTAR2 DRA001158,DRS012384 chr5:36152951-36152994
64251 chr6 36654231 36654231 1 + G C rs184742749 36654231 + 36654211 36654251 41 AGGGGGAAGGTGGGGTCCTGGAGCAGACCACCCCGCCTGCC AGGGGGAAGGTGGGGTCCTGCAGCAGACCACCCCGCCTGCC Direct Gain 0 0.964767112934684 0 0.875304102897644 prediction 0.929534225869368 Functional Gain - CDKN1A ENSG00000124762 UTR3 Human protein_coding chr6:36654231 chr6:36654231 . . 0 21 hm5C_associated_SNPs_130402 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr6:36654205-36654233
64251 chr10 127408404 127408404 1 + G C HNSC 127408404 + 127408384 127408424 41 ATGCCAAGGAGGCCGGAGCCGAGGGTCCGCCGGCCGGGGCC ATGCCAAGGAGGCCGGAGCCCAGGGTCCGCCGGCCGGGGCC Direct Gain 0 0.964735464866142 0 0.879686653614044 prediction 0.929470929732285 Functional Gain - EDRF1 ENSG00000107938 CDS Human protein_coding chr10:127408404 chr10:127408404 nonsynonymous SNV 0.739 1 21 hm5C_associated_SNPs_130406 0 0 3 DDX3X POSTAR2 ENCODE chr10:127408288-127408420
64251 chr8 66605949 66605949 1 + T C SARC 66605949 + 66605929 66605969 41 AGTGGCGTCTTTTGCTGATGTTGGATGGGTAGCCAAAGAAG AGTGGCGTCTTTTGCTGATGCTGGATGGGTAGCCAAAGAAG Direct Gain 0 0.96458883424238 0 0.871254324913025 prediction 0.929177668484759 Functional Gain - MTFR1 ENSG00000066855 CDS Human protein_coding chr8:66605949 chr8:66605949 nonsynonymous SNV 0.981 3 21 hm5C_associated_SNPs_130415 0 0 6 TARDBP POSTAR2 DRA001158,DRS012385 chr8:66605919-66605977
64251 chr12 27953597 27953597 1 + T C rs1129800 27953597 + 27953577 27953617 41 GTTGCAGTGAGCCGAGATTGTGCCATTGCACTCCAGCCTGG GTTGCAGTGAGCCGAGATTGCGCCATTGCACTCCAGCCTGG Direct Gain 0 0.964529221862566 0 0.554796814918518 prediction 0.929058443725133 Functional Gain - KLHL42 ENSG00000256512 ncRNA_intronic Human antisense chr12:27953597 chr12:27953597 . . 0 21 hm5C_associated_SNPs_130418 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012389 chr12:27953592-27953657
64251 chr16 28841315 28841315 1 + G C BLCA 28841315 + 28841295 28841335 41 ACGACGATGGGCGCACTGAAGAGGAGAAGCACAGTGCAGTC ACGACGATGGGCGCACTGAACAGGAGAAGCACAGTGCAGTC Direct Gain 0 0.964443920439848 0 0.897078156471252 prediction 0.928887840879696 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28841315 chr16:28841315 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_130421 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:28841260-28841357
64251 chr2 61248598 61248598 1 + G C rs551373475 61248598 + 61248578 61248618 41 GCGAGGCAGCAGCCTGGCAGGGGGAGGGGAATCCACCATTG GCGAGGCAGCAGCCTGGCAGCGGGAGGGGAATCCACCATTG Direct Gain 0 0.964260347517445 0 0.889270007610321 prediction 0.928520695034889 Functional Gain - PEX13 ENSG00000162928 intronic Human protein_coding chr2:61248598 chr2:61248598 . . 0 21 hm5C_associated_SNPs_130426 0 0 1 GRWD1 POSTAR2 ENCODE chr2:61248549-61248694
64251 chr6 142541553 142541553 1 + T C rs12665758 142541553 + 142541533 142541573 41 ATAGAGGGAAGGAGACAATATAGAAACTACGGAGTCCGCTG ATAGAGGGAAGGAGACAATACAGAAACTACGGAGTCCGCTG Direct Gain 0 0.964237916940184 0 0.673034012317657 prediction 0.928475833880369 Functional Gain - VTA1 ENSG00000009844 UTR3 Human protein_coding chr6:142541553 chr6:142541553 . . 0 21 hm5C_associated_SNPs_130428 0 0 3 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr6:142541529-142541555
64251 chr12 85674234 85674234 1 + G C BLCA 85674234 + 85674214 85674254 41 GCCGAGCATCACGTGCGCTTGGAGAGGACCTCGCCCTGTCA GCCGAGCATCACGTGCGCTTCGAGAGGACCTCGCCCTGTCA Direct Gain 0 0.964142091750424 0 0.775822460651398 prediction 0.928284183500848 Functional Gain - ALX1 ENSG00000180318 CDS Human protein_coding chr12:85674234 chr12:85674234 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130434 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr12:85674222-85674258
64251 chr9 37487901 37487901 1 + T C rs16934141 37487901 + 37487881 37487921 41 TCCTATGTGGGAAACAATTTTGGGACTGGAGCCCTCAAATG TCCTATGTGGGAAACAATTTCGGGACTGGAGCCCTCAAATG Direct Gain 0 0.964103272605996 0 0.864240527153015 prediction 0.928206545211991 Functional Gain - POLR1E ENSG00000137054 CDS Human protein_coding chr9:37487901 chr9:37487901 synonymous SNV . 0 21 hm5C_associated_SNPs_130440 0 0 3 LIN28A POSTAR2 GSE44616,GSM1087848 chr9:37487891-37487921
64251 chr5 139946769 139946769 1 + T C UCEC 139946769 + 139946749 139946789 41 GTGGGTATGAGTGTAGAGGATGGGGGTATGCCAGGCCTGGG GTGGGTATGAGTGTAGAGGACGGGGGTATGCCAGGCCTGGG Direct Gain 0 0.96410080208378 0 0.88704115152359 prediction 0.928201604167561 Functional Gain - SLC35A4 ENSG00000176087 CDS Human protein_coding chr5:139946769 chr5:139946769 synonymous SNV . 0 21 hm5C_associated_SNPs_130441 0 0 15 LIN28B POSTAR2 GSE46908,GSM1140829 chr5:139946749-139946778
64251 chr12 104458418 104458418 1 + G C LUAD 104458418 + 104458398 104458438 41 CCGCGCCCGGCACGGACACCGAGCGGTGGCCATCCGGGAGC CCGCGCCCGGCACGGACACCCAGCGGTGGCCATCCGGGAGC Direct Gain 0 0.964066268738788 0 0.765998005867004 prediction 0.928132537477577 Functional Gain - HCFC2 ENSG00000111727 CDS Human protein_coding chr12:104458418 chr12:104458418 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_130442 0 0 1 EIF3H POSTAR2 ENCODE chr12:104458314-104458426
64251 chr16 14165217 14165217 1 + G C rs568565225 14165217 + 14165197 14165237 41 GAGCGGCGGCGGCGGCGGCCGGGGAGGTGAGCGGCGGGCGG GAGCGGCGGCGGCGGCGGCCCGGGAGGTGAGCGGCGGGCGG Direct Gain 0 0.96398029439937 0 0.893436193466187 prediction 0.927960588798741 Functional Gain - MKL2 ENSG00000186260 UTR5 Human protein_coding chr16:14165217 chr16:14165217 . . 0 21 hm5C_associated_SNPs_130448 0 0 2 NCBP2 POSTAR2 ENCODE chr16:14165179-14165232
64251 chr13 88328757 88328757 1 + T C rs183111563 88328757 + 88328737 88328777 41 AGACCAAATCCCCGGTGCCTTTGGAGTGTCCCACCGCGTGC AGACCAAATCCCCGGTGCCTCTGGAGTGTCCCACCGCGTGC Direct Gain 0 0.963802409427725 0 0.86836838722229 prediction 0.92760481885545 Functional Gain - SLITRK5 ENSG00000165300 CDS Human protein_coding chr13:88328757 chr13:88328757 synonymous SNV . 0 21 hm5C_associated_SNPs_130457 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr13:88328720-88328760
64251 chr20 49354448 49354448 1 + G C BLCA 49354448 + 49354428 49354468 41 GATCAAAACCTGGAAAATTTGAGGAGTTTTATGGATTACTA GATCAAAACCTGGAAAATTTCAGGAGTTTTATGGATTACTA Direct Gain 0 0.963795707687795 0 0.777283310890198 prediction 0.92759141537559 Functional Gain - PARD6B ENSG00000124171 CDS Human protein_coding chr20:49354448 chr20:49354448 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130459 0 0 1 PPIG POSTAR2 ENCODE chr20:49354387-49354453
64251 chr7 43622927 43622927 1 + G C rs200156727 43622927 + 43622907 43622947 41 GGGCAGGCCGGGGTCTGAGCGGGCCGTGCCGGCCGCCGCCG GGGCAGGCCGGGGTCTGAGCCGGCCGTGCCGGCCGCCGCCG Direct Gain 0 0.96378051868525 0 0.863123893737793 prediction 0.9275610373705 Functional Gain - STK17A ENSG00000164543 CDS Human protein_coding chr7:43622927 chr7:43622927 nonsynonymous SNV 0.009 0 21 hm5C_associated_SNPs_130461 0 0 1 DDX3X POSTAR2 ENCODE chr7:43622926-43622974
64251 chr15 78833149 78833149 1 + T C rs539113860 78833149 + 78833129 78833169 41 TCTGTGGGCAGGACCGAGAGTTGGGGTGGCTTCCGTCCTCA TCTGTGGGCAGGACCGAGAGCTGGGGTGGCTTCCGTCCTCA Direct Gain 0 0.963591597173435 0 0.835691809654236 prediction 0.92718319434687 Functional Gain - PSMA4 ENSG00000041357 UTR5 Human protein_coding chr15:78833149 chr15:78833149 . . 0 21 hm5C_associated_SNPs_130465 0 0 9 PTBP1 POSTAR2 GSE57278,GSM1486178 chr15:78833120-78833160
64251 chr17 35873324 35873324 1 + T C rs1051849 35873324 + 35873304 35873344 41 AGCTCAGTGCAAAAATCACTTTGGGGCCTCATTAACCCTTT AGCTCAGTGCAAAAATCACTCTGGGGCCTCATTAACCCTTT Direct Gain 0 0.963515629146068 0 0.891823470592499 prediction 0.927031258292135 Functional Gain - DUSP14 ENSG00000161326 UTR3 Human other chr17:35873324 chr17:35873324 . . 0 21 hm5C_associated_SNPs_130468 0 0 5 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:35873290-35873344
64251 chr16 2506791 2506791 1 - A G UCEC 2506791 - 2506771 2506811 41 GCCACCGTCCACGGAGCTTGTGGGACTTGCGGTGCTGACGG GCCACCGTCCACGGAGCTTGCGGGACTTGCGGTGCTGACGG Direct Gain 0 0.963403974882651 0 0.942298650741577 prediction 0.926807949765301 Functional Gain - CCNF ENSG00000162063 CDS Human protein_coding chr16:2506791 chr16:2506791 nonsynonymous SNV 0.283 0 21 hm5C_associated_SNPs_130472 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr16:2506768-2506800
64251 chr6 80816425 80816425 1 + G C UVM 80816425 + 80816405 80816445 41 GCGGGGATGGCGGTTGTAGCGGCGGCTGCCGGCTGGCTACT GCGGGGATGGCGGTTGTAGCCGCGGCTGCCGGCTGGCTACT Direct Gain 0 0.963248343409893 0 0.793289422988892 prediction 0.926496686819787 Functional Gain - BCKDHB ENSG00000083123 CDS Human protein_coding chr6:80816425 chr6:80816425 synonymous SNV . 0 21 hm5C_associated_SNPs_130478 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr6:80816425-80816426
64251 chr3 40552976 40552976 1 + G C BLCA 40552976 + 40552956 40552996 41 TTTAGGAACCAGTGACCTTTGAGGATGTGGCTGTGTACTTC TTTAGGAACCAGTGACCTTTCAGGATGTGGCTGTGTACTTC Direct Gain 0 0.96318325603393 0 0.680966436862946 prediction 0.92636651206786 Functional Gain - ZNF620 ENSG00000177842 CDS Human protein_coding chr3:40552976 chr3:40552976 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_130482 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350198 chr3:40552931-40552986
64251 chr6 88362934 88362934 1 + G C BLCA 88362934 + 88362914 88362954 41 GCAGCACAGCTAAGAGAATAGAGGAGTTCCTGGCCCAGTTT GCAGCACAGCTAAGAGAATACAGGAGTTCCTGGCCCAGTTT Direct Gain 0 0.963129956045428 0 0.684310913085938 prediction 0.926259912090856 Functional Gain - ORC3 ENSG00000135336 CDS Human protein_coding chr6:88362934 chr6:88362934 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130486 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:88362871-88362938
64251 chr20 47836040 47836040 1 + G C LUSC 47836040 + 47836020 47836060 41 GCGAGGATGACGAGGTGCCGGTGGAGCCCGAGTCTGACTCC GCGAGGATGACGAGGTGCCGCTGGAGCCCGAGTCTGACTCC Direct Gain 0 0.963122200879597 0 0.865191400051117 prediction 0.926244401759193 Functional Gain - DDX27 ENSG00000124228 CDS Human protein_coding chr20:47836040 chr20:47836040 nonsynonymous SNV 0.363 1 21 hm5C_associated_SNPs_130487 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr20:47836024-47836067
64251 chr17 36478745 36478745 1 + T C rs191016452 36478745 + 36478725 36478765 41 ACAGTATGTTTCAGAGAACATTGGATATCAGTTTTTCCCAC ACAGTATGTTTCAGAGAACACTGGATATCAGTTTTTCCCAC Direct Gain 0 0.963070934708822 0 0.804531693458557 prediction 0.926141869417644 Functional Gain - MRPL45 ENSG00000174100 UTR3 Human other chr17:36478745 chr17:36478745 . . 0 21 hm5C_associated_SNPs_130488 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr17:36478697-36478767
64251 chr20 32664886 32664886 1 + T C STAD 32664886 + 32664866 32664906 41 GGCGGCGGCGGCGGTGGTGGTGGCAGCGGTGGCGGTGGCAG GGCGGCGGCGGCGGTGGTGGCGGCAGCGGTGGCGGTGGCAG Direct Gain 0 0.963045741917001 0 0.960159420967102 prediction 0.926091483834002 Functional Gain - RALY ENSG00000125970 CDS Human protein_coding chr20:32664886 chr20:32664886 synonymous SNV . 0 21 hm5C_associated_SNPs_130490 0 0 7 DDX24 POSTAR2 ENCODE chr20:32664839-32664889
64251 chr12 81472038 81472038 1 + G C BLCA 81472038 + 81472018 81472058 41 CGGGCCCGCGGGGCGGTCTCGGGGGCCGGGGATGCAGGGCA CGGGCCCGCGGGGCGGTCTCCGGGGCCGGGGATGCAGGGCA Direct Gain 0 0.963035419516987 0 0.964242219924927 prediction 0.926070839033974 Functional Gain - ACSS3 ENSG00000111058 CDS Human protein_coding chr12:81472038 chr12:81472038 nonsynonymous SNV 0.013 2 21 hm5C_associated_SNPs_130491 0 0 5 DDX3X POSTAR2 ENCODE chr12:81471999-81472089
64251 chr14 56233760 56233760 1 + T C rs11622564 56233760 + 56233740 56233780 41 CAAGGGAGCCGGAAGACTAATTGGAGGGGCCCTCCCTTGTG CAAGGGAGCCGGAAGACTAACTGGAGGGGCCCTCCCTTGTG Direct Gain 0 0.963034780369809 0 0.840857267379761 prediction 0.926069560739619 Functional Gain - RPL13AP3 ENSG00000177350 ncRNA_exonic Human transcribed_processed_pseudogene chr14:56233760 chr14:56233760 . . 0 21 hm5C_associated_SNPs_130492 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr14:56233735-56233771
64251 chr4 8621215 8621215 1 + G C SARC 8621215 + 8621195 8621235 41 CTGGGAGGTGCCAGCTCTTTGGGGGAGGCCACGGAGCCCGA CTGGGAGGTGCCAGCTCTTTCGGGGAGGCCACGGAGCCCGA Direct Gain 0 0.96274498287453 0 0.969999313354492 prediction 0.925489965749061 Functional Gain - CPZ ENSG00000109625 CDS Human protein_coding chr4:8621215 chr4:8621215 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_130501 0 0 2 SND1 POSTAR2 ENCODE chr4:8621163-8621269
64251 chr6 26158710 26158710 1 + G C LUAD 26158710 + 26158690 26158730 41 CCGTGCGCCTGCTGCTTCCGGGGGAGCTGGCCAAGCACGCC CCGTGCGCCTGCTGCTTCCGCGGGAGCTGGCCAAGCACGCC Direct Gain 0 0.962624055857237 0 0.930046081542969 prediction 0.925248111714474 Functional Gain - HIST1H2BD ENSG00000158373 CDS Human protein_coding chr6:26158710 chr6:26158710 nonsynonymous SNV 0.163 2 21 hm5C_associated_SNPs_130509 0 0 18 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:26158660-26158720
64251 chr17 40172232 40172232 1 + T C rs28372786 40172232 + 40172212 40172252 41 GGCCCCGGGAGGTACGGACCTGGGAGGCGAGGCTCGTCCGG GGCCCCGGGAGGTACGGACCCGGGAGGCGAGGCTCGTCCGG Direct Gain 0 0.962517038366086 0 0.9365074634552 prediction 0.925034076732173 Functional Gain - NKIRAS2 ENSG00000168256 UTR5 Human protein_coding chr17:40172232 chr17:40172232 . . 0 21 hm5C_associated_SNPs_130511 0 0 4 BUD13 POSTAR2 ENCODE chr17:40172145-40172323
64251 chr1 161090430 161090430 1 + G C CESC 161090430 + 161090410 161090450 41 CAGTGGTGGCCCGCTGCTCTGAGGGGCCAGGCCTCTGCCTT CAGTGGTGGCCCGCTGCTCTCAGGGGCCAGGCCTCTGCCTT Direct Gain 0 0.962497826466824 0 0.988025546073914 prediction 0.924995652933648 Functional Gain - NIT1 ENSG00000158793 CDS Human protein_coding chr1:161090430 chr1:161090430 nonsynonymous SNV 0.923 1 21 hm5C_associated_SNPs_130512 0 0 2 DDX55 POSTAR2 ENCODE chr1:161090375-161090451
64251 chr10 38404188 38404188 1 + G C rs117193245 38404188 + 38404168 38404208 41 GCGAGGAGCCATGGATATTAGAGGAAAAATTTCCAAGCCAG GCGAGGAGCCATGGATATTACAGGAAAAATTTCCAAGCCAG Direct Gain 0 0.962496010084856 0 0.865256667137146 prediction 0.924992020169713 Functional Gain - ZNF37A ENSG00000075407 CDS Human protein_coding chr10:38404188 chr10:38404188 nonsynonymous SNV 0.908 1 21 hm5C_associated_SNPs_130514 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917675 chr10:38404177-38404212
64251 chr14 77935506 77935506 1 + G C LUAD 77935506 + 77935486 77935526 41 GTCGAGGCATCCCTGCTCCTGAGGAAGAGCGGACGCGACAG GTCGAGGCATCCCTGCTCCTCAGGAAGAGCGGACGCGACAG Direct Gain 0 0.962482691301745 0 0.904945731163025 prediction 0.924965382603489 Functional Gain - AHSA1 ENSG00000100591 CDS Human protein_coding chr14:77935506 chr14:77935506 nonsynonymous SNV 0.993 1 21 hm5C_associated_SNPs_130516 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:77935449-77935515
64251 chrX 102612716 102612716 1 + T C SKCM 102612716 + 102612696 102612736 41 GCCAGAAGAGGAGGAGAAGCTAGAGGAGGAGGCCAAAGCAA GCCAGAAGAGGAGGAGAAGCCAGAGGAGGAGGCCAAAGCAA Direct Gain 0 0.962362758395748 0 0.878423452377319 prediction 0.924725516791497 Functional Gain - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612716 chrX:102612716 nonsynonymous SNV 0.633 0 21 hm5C_associated_SNPs_130519 0 0 9 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:102612694-102612718
64251 chr9 124074734 124074734 1 + G C rs369788495 124074734 + 124074714 124074754 41 GGGCCCGAGTGCACGTGTCTGAGGAGGGCACTGAGCCCGAG GGGCCCGAGTGCACGTGTCTCAGGAGGGCACTGAGCCCGAG Direct Gain 0 0.962349303169492 0 0.945734858512878 prediction 0.924698606338984 Functional Gain - GSN ENSG00000148180 CDS Human protein_coding chr9:124074734 chr9:124074734 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_130522 0 0 6 FUS POSTAR2 GSE40653,GSM998875 chr9:124074720-124074740
64251 chr7 100731896 100731896 1 + T C rs61730716 100731896 + 100731876 100731916 41 GAGAAGAGGGAGCCCAGACCTTGGAGGAGGACAGGGCCCAG GAGAAGAGGGAGCCCAGACCCTGGAGGAGGACAGGGCCCAG Direct Gain 0 0.962254461488992 0 0.842147946357727 prediction 0.924508922977985 Functional Gain - TRIM56 ENSG00000169871 CDS Human protein_coding chr7:100731896 chr7:100731896 synonymous SNV . 0 21 hm5C_associated_SNPs_130528 0 0 3 EIF3D POSTAR2 GSE65004,GSM1585671 chr7:100731887-100731909
64251 chr6 139355328 139355328 1 + G C LUAD 139355328 + 139355308 139355348 41 ATCACGAGGTTAACCTCTTAGTGGAGGAAATTCATCGTTTG ATCACGAGGTTAACCTCTTACTGGAGGAAATTCATCGTTTG Direct Gain 0 0.962087026198272 0 0.901332378387451 prediction 0.924174052396544 Functional Gain - ABRACL ENSG00000146386 CDS Human protein_coding chr6:139355328 chr6:139355328 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_130534 0 0 4 CPSF7 POSTAR2 GSE37401,GSM917663 chr6:139355300-139355338
64251 chr22 41612201 41612201 1 + T C UCEC 41612201 + 41612181 41612221 41 GGCTGCCTGGTCTGCCAAAATTGGAGCCTTCCTCCACTCTC GGCTGCCTGGTCTGCCAAAACTGGAGCCTTCCTCCACTCTC Direct Gain 0 0.962064263585367 0 0.614293694496155 prediction 0.924128527170734 Functional Gain - L3MBTL2 ENSG00000100395 CDS Human protein_coding chr22:41612201 chr22:41612201 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130537 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr22:41612194-41612224
64251 chr10 94449720 94449720 1 + G C rs558170145 94449720 + 94449700 94449740 41 GCGCGGGCCAGCAGCTCTGCGAGGGGCCGGAGCGCGGCGGA GCGCGGGCCAGCAGCTCTGCCAGGGGCCGGAGCGCGGCGGA Direct Gain 0 0.961731182482546 0 0.960467219352722 prediction 0.923462364965091 Functional Gain - HHEX ENSG00000152804 UTR5 Human protein_coding chr10:94449720 chr10:94449720 . . 0 21 hm5C_associated_SNPs_130546 0 0 5 DDX3X POSTAR2 GSE70804,GSM1819209 chr10:94449719-94449720
64251 chr17 56160842 56160842 1 + T C rs2533003 56160842 + 56160822 56160862 41 GGGCGGGCGGGCGGGCGGCGTGAGGCGGAGCGCGGGCGGCC GGGCGGGCGGGCGGGCGGCGCGAGGCGGAGCGCGGGCGGCC Direct Gain 0 0.96173084140091 0 0.875787436962128 prediction 0.92346168280182 Functional Gain - DYNLL2 ENSG00000264364 UTR5 Human protein_coding chr17:56160842 chr17:56160842 . . 0 21 hm5C_associated_SNPs_130547 0 0 29 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:56160840-56160860
64251 chr1 154956408 154956408 1 + G C BLCA 154956408 + 154956388 154956428 41 CGTGCTTGCGACCCCTATTTGGGGGTCTGGGTGGCTACTGG CGTGCTTGCGACCCCTATTTCGGGGTCTGGGTGGCTACTGG Direct Gain 0 0.961688085995316 0 0.955638408660889 prediction 0.923376171990631 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154956408 chr1:154956408 nonsynonymous SNV 0.687 0 21 hm5C_associated_SNPs_130550 0 0 13 CPSF3 POSTAR2 GSE37401,GSM917669 chr1:154956395-154956415
64251 chr14 71374232 71374232 1 + G C rs565675471 71374232 + 71374212 71374252 41 GGGGTCGCGGCGGCGGCAGTGGGGGCGCTGGCGGGCCGCGG GGGGTCGCGGCGGCGGCAGTCGGGGCGCTGGCGGGCCGCGG Direct Gain 0 0.96165944372854 0 0.996509552001953 prediction 0.923318887457081 Functional Gain - PCNX1 ENSG00000100731 UTR5 Human protein_coding chr14:71374232 chr14:71374232 . . 0 21 hm5C_associated_SNPs_130552 0 0 4 DDX3X POSTAR2 ENCODE chr14:71374180-71374237
64251 chr7 158649366 158649366 1 + G C rs571952764 158649366 + 158649346 158649386 41 GGGGCACAGGTGGCCTCTTCGGGGTGGACCGCGCCTGGCCG GGGGCACAGGTGGCCTCTTCCGGGTGGACCGCGCCTGGCCG Direct Gain 0 0.961602762894195 0 0.969645977020264 prediction 0.92320552578839 Functional Gain - WDR60 ENSG00000126870 UTR5 Human protein_coding chr7:158649366 chr7:158649366 . . 0 21 hm5C_associated_SNPs_130557 0 0 8 DDX3X POSTAR2 GSE70804,GSM1819209 chr7:158649365-158649366
64251 chr1 33237483 33237483 1 - A G UCEC 33237483 - 33237463 33237503 41 GGGGCCGATGGCCCCAGTGCTGGGGTGGGAGCCCCTCCTGG GGGGCCGATGGCCCCAGTGCCGGGGTGGGAGCCCCTCCTGG Direct Gain 0 0.961599525647875 0 0.967059373855591 prediction 0.92319905129575 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237483 chr1:33237483 synonymous SNV . 0 21 hm5C_associated_SNPs_130559 0 0 1 FIP1L1 POSTAR2 GSE37401,GSM917675 chr1:33237458-33237496
64251 chr2 20647308 20647308 1 + G C ACC 20647308 + 20647288 20647328 41 TGCTGATCGTGTTCAGTAAGGACGAGTTCCCCGAGGTGTAC TGCTGATCGTGTTCAGTAAGCACGAGTTCCCCGAGGTGTAC Direct Gain 0 0.961535950384011 0 0.330379366874695 prediction 0.923071900768022 Functional Gain - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647308 chr2:20647308 nonsynonymous SNV 0.995 2 21 hm5C_associated_SNPs_130564 0 0 12 DDX3X POSTAR2 GSE70804,GSM1819213 chr2:20647240-20647320
64251 chr22 41574615 41574615 1 - T G UCEC 41574615 - 41574595 41574635 41 ACTTGATTGGAGAGAGAATTAGGGATCTGCTGGCCTTGTAG ACTTGATTGGAGAGAGAATTCGGGATCTGCTGGCCTTGTAG Direct Gain 0 0.961265259449212 0 0.950308620929718 prediction 0.922530518898425 Functional Gain - EP300 ENSG00000100393 CDS Human protein_coding chr22:41574615 chr22:41574615 synonymous SNV . 0 21 hm5C_associated_SNPs_130576 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr22:41574597-41574629
64251 chr5 148695757 148695757 1 + G C LUSC 148695757 + 148695737 148695777 41 GCAGAACTGAAGGGCTCAATGAGCAGGGCTGCGGGCCGCAA GCAGAACTGAAGGGCTCAATCAGCAGGGCTGCGGGCCGCAA Direct Gain 0 0.961180980519398 0 0.943068385124207 prediction 0.922361961038796 Functional Gain - AFAP1L1 ENSG00000157510 CDS Human protein_coding chr5:148695757 chr5:148695757 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_130584 0 0 1 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr5:148695737-148695769
64251 chr13 114145380 114145380 1 + G C rs112329358 114145380 + 114145360 114145400 41 GCGGGGGCGGTGCTGGGCAGGGCGGCGGCCGCTCCCTCCCG GCGGGGGCGGTGCTGGGCAGCGCGGCGGCCGCTCCCTCCCG Direct Gain 0 0.96099685989501 0 0.874165654182434 prediction 0.921993719790021 Functional Gain - TMCO3 ENSG00000150403 UTR5 Human protein_coding chr13:114145380 chr13:114145380 . . 0 21 hm5C_associated_SNPs_130592 0 0 3 SSB POSTAR2 GSE95683,GSM2521599 chr13:114145365-114145381
64251 chrX 146993631 146993631 1 + G C rs782202125 146993631 + 146993611 146993651 41 CGGCGGCGGCGGCGGCGGCTGGGCCTCGAGCGCCCGCAGCC CGGCGGCGGCGGCGGCGGCTCGGCCTCGAGCGCCCGCAGCC Direct Gain 0 0.960986351160186 0 0.750033259391785 prediction 0.921972702320373 Functional Gain - FMR1 ENSG00000102081 UTR5 Human protein_coding chrX:146993631 chrX:146993631 . . 0 21 hm5C_associated_SNPs_130593 0 0 2 PPIG POSTAR2 ENCODE chrX:146993561-146993677
64251 chr11 75115170 75115170 1 + G C HNSC 75115170 + 75115150 75115190 41 GGGCTAAATCCATGAAGTTTGTGGATGGCCTGATGATCCAC GGGCTAAATCCATGAAGTTTCTGGATGGCCTGATGATCCAC Direct Gain 0 0.960978936622205 0 0.947854161262512 prediction 0.92195787324441 Functional Gain - RPS3 ENSG00000149273 CDS Human protein_coding chr11:75115170 chr11:75115170 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130595 0 0 36 FUS POSTAR2 DRA001158,DRS012384 chr11:75115069-75115252
64251 chr18 56823024 56823024 1 + T C SKCM 56823024 + 56823004 56823044 41 GCTGGAAAAGAAGGACGTGGTGGGAAGAGCAAGAGGGTGAG GCTGGAAAAGAAGGACGTGGCGGGAAGAGCAAGAGGGTGAG Direct Gain 0 0.960939686159439 0 0.803451240062714 prediction 0.921879372318879 Functional Gain - SEC11C ENSG00000166562 CDS Human protein_coding chr18:56823024 chr18:56823024 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_130597 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr18:56823013-56823040
64251 chr14 21545011 21545011 1 + A C UCEC 21545011 + 21544991 21545031 41 AGTGGGAGTTAGGAGGTCACAGGGACCCCTCTCCCAGTCAC AGTGGGAGTTAGGAGGTCACCGGGACCCCTCTCCCAGTCAC Direct Gain 0 0.960901371274866 0 0.847092986106873 prediction 0.921802742549732 Functional Gain - ARHGEF40 ENSG00000165801 CDS Human protein_coding chr14:21545011 chr14:21545011 synonymous SNV . 0 21 hm5C_associated_SNPs_130601 0 0 4 BUD13 POSTAR2 ENCODE chr14:21545001-21545022
64251 chr7 102112954 102112954 1 + T C rs539175596 102112954 + 102112934 102112974 41 TGTGGAGCTGGAGGCAGACGTGGGGGGGCCGGGGCAGCCAG TGTGGAGCTGGAGGCAGACGCGGGGGGGCCGGGGCAGCCAG Direct Gain 0 0.960762526423199 0 0.979784965515137 prediction 0.921525052846397 Functional Gain - LRWD1 ENSG00000161036 CDS Human protein_coding chr7:102112954 chr7:102112954 nonsynonymous SNV 0.102 2 21 hm5C_associated_SNPs_130610 0 0 4 AARS POSTAR2 ENCODE chr7:102112943-102112986
64251 chr15 64388288 64388288 1 + G C CESC 64388288 + 64388268 64388308 41 CCGGCCTGGAGCCGGAGTCCGAGGGGGCGGCCGGGGGATCA CCGGCCTGGAGCCGGAGTCCCAGGGGGCGGCCGGGGGATCA Direct Gain 0 0.960697505427199 0 0.867080271244049 prediction 0.921395010854398 Functional Gain - SNX1 ENSG00000028528 CDS Human protein_coding chr15:64388288 chr15:64388288 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_130612 0 0 4 EFTUD2 POSTAR2 ENCODE chr15:64388288-64388337
64251 chr10 100004536 100004536 1 + G C rs112832441 100004536 + 100004516 100004556 41 TCCAGCTGCACTGCAGCCAGGGGGGATACCAGCTTCATTCC TCCAGCTGCACTGCAGCCAGCGGGGATACCAGCTTCATTCC Direct Gain 0 0.960693833547297 0 0.916919469833374 prediction 0.921387667094594 Functional Gain - R3HCC1L ENSG00000166024 UTR3 Human protein_coding chr10:100004536 chr10:100004536 . . 0 21 hm5C_associated_SNPs_130614 0 0 1 FMR1 POSTAR2 GSE39682,GSM977616 chr10:100004514-100004536
64251 chr7 106508982 106508982 1 + G C OV 106508982 + 106508962 106509002 41 GGAAGGAAGAGTGGCCACTGGTGGATGACTGCACGGGAGTC GGAAGGAAGAGTGGCCACTGCTGGATGACTGCACGGGAGTC Direct Gain 0 0.960565530436792 0 0.868323564529419 prediction 0.921131060873583 Functional Gain - PIK3CG ENSG00000105851 CDS Human protein_coding chr7:106508982 chr7:106508982 nonsynonymous SNV 0.994 2 21 hm5C_associated_SNPs_130621 0 0 1 FXR2 POSTAR2 ENCODE chr7:106508931-106508996
64251 chr15 59417063 59417063 1 + T C rs28383563 59417063 + 59417043 59417083 41 AGACCTTGCCTCCCCACTGATAGGAAGGTCCTAGGCTGCCG AGACCTTGCCTCCCCACTGACAGGAAGGTCCTAGGCTGCCG Direct Gain 0 0.960521431942573 0 0.912050783634186 prediction 0.921042863885145 Functional Gain - CCNB2 ENSG00000157456 CDS Human protein_coding chr15:59417063 chr15:59417063 nonsynonymous SNV 0.023 0 21 hm5C_associated_SNPs_130625 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917675 chr15:59417023-59417070
64251 chr17 27188456 27188456 1 - A G LAML 27188456 - 27188436 27188476 41 CTACTGACTGCCAGGGCACTTGGGAATGGCAAGGAAACCGT CTACTGACTGCCAGGGCACTCGGGAATGGCAAGGAAACCGT Direct Gain 0 0.960518245224998 0 0.902483820915222 prediction 0.921036490449996 Functional Gain - MIR451A;MIR451B ENSG00000264066 ncRNA_exonic Human lincRNA chr17:27188456 chr17:27188456 . . 0 21 hm5C_associated_SNPs_130626 0 0 9 DROSHA POSTAR2 ENCODE chr17:27188448-27188490
64251 chr1 32681437 32681437 1 - T G BRCA 32681437 - 32681417 32681457 41 CAGCCCCAGGCTGGTTTTCCAGGGACAAGGCCTCTTCCACT CAGCCCCAGGCTGGTTTTCCCGGGACAAGGCCTCTTCCACT Direct Gain 0 0.960442701266665 0 0.958002865314484 prediction 0.92088540253333 Functional Gain - DCDC2B ENSG00000222046 CDS Human protein_coding chr1:32681437 chr1:32681437 nonsynonymous SNV 0.046 0 21 hm5C_associated_SNPs_130627 0 0 1 XRN2 POSTAR2 ENCODE chr1:32681398-32681507
64251 chr2 128459195 128459195 1 + G C rs141206501 128459195 + 128459175 128459215 41 CCGCTGCTCGCCGCGGAGAAGGCGGAGGAGCCCGGGGACCG CCGCTGCTCGCCGCGGAGAACGCGGAGGAGCCCGGGGACCG Direct Gain 0 0.960343557362929 0 0.859295010566711 prediction 0.920687114725859 Functional Gain - SFT2D3 ENSG00000173349 CDS Human protein_coding chr2:128459195 chr2:128459195 nonsynonymous SNV 0.010 0 21 hm5C_associated_SNPs_130633 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr2:128459172-128459225
64251 chr12 123238315 123238315 1 + T C SKCM 123238315 + 123238295 123238335 41 ACCCAAGGAACAGTGCCAAGTTAGATGCCGATTACCCACTT ACCCAAGGAACAGTGCCAAGCTAGATGCCGATTACCCACTT Direct Gain 0 0.960332348260762 0 0.775860488414764 prediction 0.920664696521524 Functional Gain - DENR ENSG00000139726 CDS Human protein_coding chr12:123238315 chr12:123238315 synonymous SNV . 0 21 hm5C_associated_SNPs_130635 0 0 14 CPSF6 POSTAR2 GSE37401,GSM917665 chr12:123238254-123238329
64251 chr6 26522366 26522366 1 + G C rs555046751 26522366 + 26522346 26522386 41 CGTTAGGGCATGGAGGGCCCGGGAAGGCGGCCTAGGGACGC CGTTAGGGCATGGAGGGCCCCGGAAGGCGGCCTAGGGACGC Direct Gain 0 0.960222604104351 0 0.69559770822525 prediction 0.920445208208703 Functional Gain - HCG11 ENSG00000228223 ncRNA_exonic Human lincRNA chr6:26522366 chr6:26522366 . . 0 21 hm5C_associated_SNPs_130639 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr6:26522358-26522402
64251 chr6 56911508 56911508 1 + T C rs529181557 56911508 + 56911488 56911528 41 AGTGGTGGCGGCTGCGGCAGTAGGGACAGCAGGAGCAGTGG AGTGGTGGCGGCTGCGGCAGCAGGGACAGCAGGAGCAGTGG Direct Gain 0 0.960148886306064 0 0.866107106208801 prediction 0.920297772612128 Functional Gain - KIAA1586 ENSG00000168116 UTR5 Human protein_coding chr6:56911508 chr6:56911508 . . 0 21 hm5C_associated_SNPs_130642 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr6:56911484-56911519
64251 chr5 122152657 122152657 1 + G C BLCA 122152657 + 122152637 122152677 41 CTGAGTGGAGCAGGAATATTGAGGATGGTGAACAAGGCTGC CTGAGTGGAGCAGGAATATTCAGGATGGTGAACAAGGCTGC Direct Gain 0 0.960133779717921 0 0.916055560112 prediction 0.920267559435841 Functional Gain - SNX2 ENSG00000205302 CDS Human protein_coding chr5:122152657 chr5:122152657 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130643 0 0 15 CPSF7 POSTAR2 GSE37401,GSM917663 chr5:122152631-122152668
64251 chr15 56689383 56689383 1 + T C rs150466462 56689383 + 56689363 56689403 41 GATGGAGATGAGGAACTTGTTAGGAACTAGAGCAAATGTGA GATGGAGATGAGGAACTTGTCAGGAACTAGAGCAAATGTGA Direct Gain 0 0.960075253477982 0 0.831416964530945 prediction 0.920150506955964 Functional Gain - TEX9 ENSG00000151575 UTR3 Human protein_coding chr15:56689383 chr15:56689383 . . 0 21 hm5C_associated_SNPs_130648 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:56689376-56689395
64251 chr19 52729309 52729309 1 + T C rs369880957 52729309 + 52729289 52729329 41 GTCCCTCTTTGGGGAGACACTGGGGGGCCTTTGGCTGTCAC GTCCCTCTTTGGGGAGACACCGGGGGGCCTTTGGCTGTCAC Direct Gain 0 0.960041729956501 0 0.972474455833435 prediction 0.920083459913001 Functional Gain - PPP2R1A ENSG00000268015 ncRNA_intronic Human antisense chr19:52729309 chr19:52729309 . . 0 21 hm5C_associated_SNPs_130652 0 0 17 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:52729268-52729310
64251 chr15 38776569 38776569 1 + T C rs75760193 38776569 + 38776549 38776589 41 GGCGGCGGTGGAAGGGGTGGTTGGGGTGGTGGTGGTGGAGG GGCGGCGGTGGAAGGGGTGGCTGGGGTGGTGGTGGTGGAGG Direct Gain 0 0.959838828329074 0 0.738037109375 prediction 0.919677656658149 Functional Gain - FAM98B ENSG00000171262 CDS Human protein_coding chr15:38776569 chr15:38776569 synonymous SNV . 0 21 hm5C_associated_SNPs_130663 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr15:38776559-38776588
64251 chr1 117484514 117484514 1 + T C UCEC 117484514 + 117484494 117484534 41 GCTTGCAAGCACCTGGGAGGTGGGGTTCCCAGCCCAGCTGT GCTTGCAAGCACCTGGGAGGCGGGGTTCCCAGCCCAGCTGT Direct Gain 0 0.959663517545605 0 0.961128950119019 prediction 0.91932703509121 Functional Gain - PTGFRN ENSG00000134247 CDS Human protein_coding chr1:117484514 chr1:117484514 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_130667 0 0 2 RBM15 POSTAR2 ENCODE chr1:117484451-117484554
64251 chr15 44829435 44829435 1 + G C BLCA 44829435 + 44829415 44829455 41 CGGGGGACTCGGACTCCTGGGGTGAGGAGAAGTTGCTGGGG CGGGGGACTCGGACTCCTGGCGTGAGGAGAAGTTGCTGGGG Direct Gain 0 0.959644001661675 0 0.789503812789917 prediction 0.919288003323349 Functional Gain - EIF3J ENSG00000104131 CDS Human protein_coding chr15:44829435 chr15:44829435 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_130669 0 0 4 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:44829435-44829436
64251 chr13 29252193 29252193 1 + T C UCEC 29252193 + 29252173 29252213 41 TCCATCACAAAGCGAAGTCATGGGAGAGCCACACTTGATGG TCCATCACAAAGCGAAGTCACGGGAGAGCCACACTTGATGG Direct Gain 0 0.959637601034662 0 0.91568922996521 prediction 0.919275202069323 Functional Gain - POMP ENSG00000132963 CDS Human protein_coding chr13:29252193 chr13:29252193 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_130671 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr13:29252180-29252200
64251 chr18 19203799 19203799 1 + G C BLCA 19203799 + 19203779 19203819 41 GCTGGAAACGCTGAGTATTCGAGGAAATAACATTCGGTATT GCTGGAAACGCTGAGTATTCCAGGAAATAACATTCGGTATT Direct Gain 0 0.959626468949268 0 0.807859480381012 prediction 0.919252937898537 Functional Gain - SNRPD1 ENSG00000167088 CDS Human protein_coding chr18:19203799 chr18:19203799 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_130674 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr18:19203791-19203830
64251 chr14 39650297 39650297 1 + G C CESC 39650297 + 39650277 39650317 41 AAAAGGAGTCTGAGGAAAAAGAAGAAAAAGAATCTGAGCCC AAAAGGAGTCTGAGGAAAAACAAGAAAAAGAATCTGAGCCC Direct Gain 0 0.959624736978003 0 0.693581104278564 prediction 0.919249473956006 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39650297 chr14:39650297 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130675 0 0 33 CPSF7 POSTAR2 GSE37401,GSM917663 chr14:39650140-39650300
64251 chr17 4835939 4835939 1 - T G STAD 4835939 - 4835919 4835959 41 ACAGATGGGGTGGGGGTGTAAGGGGCTTGGCAGCAGGAGCA ACAGATGGGGTGGGGGTGTACGGGGCTTGGCAGCAGGAGCA Direct Gain 0 0.959597586193365 0 0.880740165710449 prediction 0.919195172386729 Functional Gain - GP1BA ENSG00000185245 CDS Human protein_coding chr17:4835939 chr17:4835939 nonsynonymous SNV 0.137 1 21 hm5C_associated_SNPs_130677 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:4835916-4835970
64251 chr6 3264488 3264488 1 + G C LIHC 3264488 + 3264468 3264508 41 CTGTGAGTGTGGCGTAGAGTGGGGATTAAGCAAAGGTCATG CTGTGAGTGTGGCGTAGAGTCGGGATTAAGCAAAGGTCATG Direct Gain 0 0.95958530597921 0 0.892439186573029 prediction 0.91917061195842 Functional Gain - PSMG4 ENSG00000180822 CDS Human protein_coding chr6:3264488 chr6:3264488 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_130679 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350196 chr6:3264413-3264492
64251 chr15 41657737 41657737 1 + G C BLCA 41657737 + 41657717 41657757 41 AGTCAGAGTACCTTGGGTCTGAAGGGGTCACTCAAGCGCTC AGTCAGAGTACCTTGGGTCTCAAGGGGTCACTCAAGCGCTC Direct Gain 0 0.959511067146366 0 0.861107051372528 prediction 0.919022134292731 Functional Gain - NUSAP1 ENSG00000137804 CDS Human protein_coding chr15:41657737 chr15:41657737 synonymous SNV . 0 21 hm5C_associated_SNPs_130683 0 0 13 SRSF1 POSTAR2 GSE83923,GSM2221667 chr15:41657720-41657740
64251 chr11 60689575 60689575 1 + G C BLCA 60689575 + 60689555 60689595 41 GAGGGCTGGAACGCCAGGTGGAGGAGCTGCGCTGGCGCCAG GAGGGCTGGAACGCCAGGTGCAGGAGCTGCGCTGGCGCCAG Direct Gain 0 0.959510275959133 0 0.92018723487854 prediction 0.919020551918266 Functional Gain - TMEM109 ENSG00000110108 CDS Human protein_coding chr11:60689575 chr11:60689575 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130684 0 0 6 LIN28A POSTAR2 GSE44616,GSM1087848 chr11:60689563-60689584
64251 chr12 16052915 16052915 1 + G C CESC 16052915 + 16052895 16052935 41 AACTCTATGCCAGTGGTTCAGAAGATGGAACATTGAGACTA AACTCTATGCCAGTGGTTCACAAGATGGAACATTGAGACTA Direct Gain 0 0.959380509818359 0 0.648860096931458 prediction 0.918761019636718 Functional Gain - STRAP ENSG00000023734 CDS Human protein_coding chr12:16052915 chr12:16052915 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_130689 0 0 23 TARDBP POSTAR2 DRA001158,DRS012387 chr12:16052845-16052925
64251 chr17 43698040 43698040 1 + G C rs555506576 43698040 + 43698020 43698060 41 CCTGAGGGCCTGGCTGCCCGGGGGGCGGGCCGGGGCCGCGG CCTGAGGGCCTGGCTGCCCGCGGGGCGGGCCGGGGCCGCGG Direct Gain 0 0.959315336166747 0 0.946172595024109 prediction 0.918630672333494 Functional Gain - LINC02210 ENSG00000204650 ncRNA_exonic Human transcribed_unitary_pseudogene chr17:43698040 chr17:43698040 . . 0 21 hm5C_associated_SNPs_130691 0 0 1 CSTF2T POSTAR2 ENCODE chr17:43698039-43698109
64251 chr4 140375145 140375145 1 + G C rs13126617 140375145 + 140375125 140375165 41 GGCCGCGGGCAGGCGGCTCCGTGCGGCGGGGCGGGCGGGTG GGCCGCGGGCAGGCGGCTCCCTGCGGCGGGGCGGGCGGGTG Direct Gain 0 0.959269444447488 0 0.68423867225647 prediction 0.918538888894975 Functional Gain - RAB33B ENSG00000273247 ncRNA_exonic Human antisense chr4:140375145 chr4:140375145 . . 0 21 hm5C_associated_SNPs_130692 1 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:140375119-140375149
64251 chr12 69753776 69753776 1 + T C UCEC 69753776 + 69753756 69753796 41 TTCAAGAGAATGGCCGAATTTGGGCCTGACTCCGGCGGGAG TTCAAGAGAATGGCCGAATTCGGGCCTGACTCCGGCGGGAG Direct Gain 0 0.959170177662529 0 0.811235010623932 prediction 0.918340355325057 Functional Gain - YEATS4 ENSG00000127337 CDS Human protein_coding chr12:69753776 chr12:69753776 synonymous SNV . 0 21 hm5C_associated_SNPs_130698 0 0 9 NCBP3 POSTAR2 GSE38201,GSM936507 chr12:69753771-69753794
64251 chr20 42086540 42086540 1 + T C rs529720695 42086540 + 42086520 42086560 41 GGCGCGCGCGCGCGCCATTGTGTGGCTGGACTCGGCCGCCC GGCGCGCGCGCGCGCCATTGCGTGGCTGGACTCGGCCGCCC Direct Gain 0 0.959109832484422 0 0.854251146316528 prediction 0.918219664968845 Functional Gain - SRSF6 ENSG00000124193 upstream Human protein_coding chr20:42086540 chr20:42086540 . . 0 21 hm5C_associated_SNPs_130703 0 0 7 RBM15B POSTAR2 GSE78030,GSM2064711 chr20:42086520-42086560
64251 chr17 53398174 53398174 1 + G C ESCA 53398174 + 53398154 53398194 41 CGCCAGGAGGTGGCTGACTTGAGGAAGGAGCTGGGCAAATG CGCCAGGAGGTGGCTGACTTCAGGAAGGAGCTGGGCAAATG Direct Gain 0 0.959073128368459 0 0.828323781490326 prediction 0.918146256736919 Functional Gain - HLF ENSG00000108924 CDS Human protein_coding chr17:53398174 chr17:53398174 nonsynonymous SNV 0.989 3 21 hm5C_associated_SNPs_130706 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr17:53398139-53398190
64251 chr1 146747884 146747884 1 + T C BLCA 146747884 + 146747864 146747904 41 AGAAGGAGGCCATTTTACTCTGGGAGCCCAGAAACCCGCTG AGAAGGAGGCCATTTTACTCCGGGAGCCCAGAAACCCGCTG Direct Gain 0 0.958801443364547 0 0.927015542984009 prediction 0.917602886729093 Functional Gain - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146747884 chr1:146747884 nonsynonymous SNV 0.988 0 21 hm5C_associated_SNPs_130714 0 0 10 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:146747877-146747907
64251 chr3 111603461 111603461 1 + G C GBM 111603461 + 111603441 111603481 41 TCTGGCTCGCTCCTGGCCATGTGGAATGGAAGTTCCCTGAG TCTGGCTCGCTCCTGGCCATCTGGAATGGAAGTTCCCTGAG Direct Gain 0 0.95877809386427 0 0.861294984817505 prediction 0.91755618772854 Functional Gain - PHLDB2 ENSG00000144824 CDS Human protein_coding chr3:111603461 chr3:111603461 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130715 0 0 1 EIF3H POSTAR2 ENCODE chr3:111603445-111603532
64251 chr1 154962044 154962044 1 + T C LUAD 154962044 + 154962024 154962064 41 CCTGCTTGGCAGGGTCTTCTTTGGGGAAAAAGGTGGCAGGT CCTGCTTGGCAGGGTCTTCTCTGGGGAAAAAGGTGGCAGGT Direct Gain 0 0.958773164861054 0 0.959901213645935 prediction 0.917546329722107 Functional Gain - FLAD1 ENSG00000160688 CDS Human protein_coding chr1:154962044 chr1:154962044 synonymous SNV . 0 21 hm5C_associated_SNPs_130717 0 0 1 HNRNPU POSTAR2 GSE34491,GSM850170 chr1:154962040-154962060
64251 chr11 118307454 118307454 1 + G C rs533795027 118307454 + 118307434 118307474 41 CAGCGGGGCTGGGGTTCCAGGGGGAGCGGCCGCCGCCTCAG CAGCGGGGCTGGGGTTCCAGCGGGAGCGGCCGCCGCCTCAG Direct Gain 0 0.958738324487967 0 0.992394804954529 prediction 0.917476648975934 Functional Gain - KMT2A ENSG00000118058 CDS Human protein_coding chr11:118307454 chr11:118307454 nonsynonymous SNV 0.983 1 21 hm5C_associated_SNPs_130718 0 0 3 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:118307440-118307460
64251 chr1 228879150 228879150 1 + T C LIHC 228879150 + 228879130 228879170 41 TGAGAAATGGGTGCCGGAGATTCGATGCCACTGTCCCAAAG TGAGAAATGGGTGCCGGAGACTCGATGCCACTGTCCCAAAG Direct Gain 0 0.958572983848965 0 0.806287527084351 prediction 0.91714596769793 Functional Gain - RHOU ENSG00000116574 CDS Human protein_coding chr1:228879150 chr1:228879150 nonsynonymous SNV 0.733 4 21 hm5C_associated_SNPs_130728 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr1:228879125-228879156
64251 chr19 7076407 7076407 1 + G C LUSC 7076407 + 7076387 7076427 41 TTTAGGGCTTGGTGACCTTTGAGGATGTGGCCGTGGAGTTC TTTAGGGCTTGGTGACCTTTCAGGATGTGGCCGTGGAGTTC Direct Gain 0 0.958570570788188 0 0.869819521903992 prediction 0.917141141576375 Functional Gain - ZNF557 ENSG00000130544 CDS Human protein_coding chr19:7076407 chr19:7076407 nonsynonymous SNV 0.743 0 21 hm5C_associated_SNPs_130729 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr19:7076400-7076436
64251 chr8 97307470 97307470 1 + T C STAD 97307470 + 97307450 97307490 41 GCTGGACAATCAGTATTACCTGGGAGCTGACTGAGGTAAGA GCTGGACAATCAGTATTACCCGGGAGCTGACTGAGGTAAGA Direct Gain 0 0.958483540326173 0 0.803829312324524 prediction 0.916967080652346 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97307470 chr8:97307470 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_130737 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr8:97307438-97307471
64251 chr6 26022093 26022093 1 + T C CESC 26022093 + 26022073 26022113 41 GCGGGGTGCTCAAGGTGTTTTTGGAGAACGTGATCCGTGAC GCGGGGTGCTCAAGGTGTTTCTGGAGAACGTGATCCGTGAC Direct Gain 0 0.95847866772948 0 0.946724414825439 prediction 0.916957335458959 Functional Gain - HIST1H4A ENSG00000196176 CDS Human other chr6:26022093 chr6:26022093 synonymous SNV . 0 21 hm5C_associated_SNPs_130738 0 0 27 DDX3X POSTAR2 GSE70804,GSM1819210 chr6:26021880-26022100
64251 chr19 42584118 42584118 1 + G C BLCA 42584118 + 42584098 42584138 41 CCCCTGAGCCCCCTGTGTCTGAGGAGACCTCAGCAGGGCCC CCCCTGAGCCCCCTGTGTCTCAGGAGACCTCAGCAGGGCCC Direct Gain 0 0.958453302216334 0 0.972729921340942 prediction 0.916906604432667 Functional Gain - ZNF574 ENSG00000105732 CDS Human protein_coding chr19:42584118 chr19:42584118 nonsynonymous SNV 0.399 0 21 hm5C_associated_SNPs_130740 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:42584105-42584130
64251 chr4 3769266 3769266 1 + G C rs181208952 3769266 + 3769246 3769286 41 GGGCGGCGGCGAGCGGGCGCGGAGGGGGGCGCGGGCGGTGC GGGCGGCGGCGAGCGGGCGCCGAGGGGGGCGCGGGCGGTGC Direct Gain 0 0.958421311480378 0 0.869278907775879 prediction 0.916842622960757 Functional Gain - ADRA2C ENSG00000184160 CDS Human protein_coding chr4:3769266 chr4:3769266 synonymous SNV . 0 21 hm5C_associated_SNPs_130741 0 0 2 RBM15 POSTAR2 ENCODE chr4:3769242-3769299
64251 chr19 49376682 49376682 1 + T C UCEC 49376682 + 49376662 49376702 41 GCTGGCCTGGAGGGAGAAGCTAGGACTCCTCTGGCAATCCC GCTGGCCTGGAGGGAGAAGCCAGGACTCCTCTGGCAATCCC Direct Gain 0 0.958249715370085 0 0.797249972820282 prediction 0.91649943074017 Functional Gain - PPP1R15A ENSG00000087074 CDS Human protein_coding chr19:49376682 chr19:49376682 synonymous SNV . 0 21 hm5C_associated_SNPs_130752 0 0 11 ELAVL1 POSTAR2 GSE28865,GSM714639 chr19:49376660-49376682
64251 chr8 56792490 56792490 1 + G C rs541271233 56792490 + 56792470 56792510 41 GCCTCCAGCCCGCGGCAAGCGGGGCGGCCGCGCCACCCCCG GCCTCCAGCCCGCGGCAAGCCGGGCGGCCGCGCCACCCCCG Direct Gain 0 0.958164892516925 0 0.82653534412384 prediction 0.91632978503385 Functional Gain - LYN ENSG00000254087 UTR5 Human protein_coding chr8:56792490 chr8:56792490 . . 0 21 hm5C_associated_SNPs_130757 0 0 1 DDX3X POSTAR2 ENCODE chr8:56792396-56792562
64251 chrX 146993720 146993720 1 + T C COAD 146993720 + 146993700 146993740 41 GGAGGAGCTGGTGGTGGAAGTGCGGGGCTCCAATGGCGCTT GGAGGAGCTGGTGGTGGAAGCGCGGGGCTCCAATGGCGCTT Direct Gain 0 0.958156003948633 0 0.934695363044739 prediction 0.916312007897265 Functional Gain - FMR1 ENSG00000102081 CDS Human protein_coding chrX:146993720 chrX:146993720 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_130760 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819211 chrX:146993680-146993720
64251 chr16 1560166 1560166 1 + T C rs2745110 1560166 + 1560146 1560186 41 GGGACATGGCAGCCTGGACGTGGGGCTGGGGCTGTGGGCGC GGGACATGGCAGCCTGGACGCGGGGCTGGGGCTGTGGGCGC Direct Gain 0 0.957917784216274 0 0.889365434646606 prediction 0.915835568432549 Functional Gain - TELO2 ENSG00000100726 UTR3 Human protein_coding chr16:1560166 chr16:1560166 . . 0 21 hm5C_associated_SNPs_130771 0 0 8 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr16:1560148-1560187
64251 chr2 191231453 191231453 1 + G C BLCA 191231453 + 191231433 191231473 41 CCTTGAGGTTGTGTTCAACAGAGGAGGAAACAGCAGAGCTT CCTTGAGGTTGTGTTCAACACAGGAGGAAACAGCAGAGCTT Direct Gain 0 0.957894585097891 0 0.714413523674011 prediction 0.915789170195781 Functional Gain - INPP1 ENSG00000151689 CDS Human protein_coding chr2:191231453 chr2:191231453 nonsynonymous SNV 0.932 1 21 hm5C_associated_SNPs_130773 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr2:191231451-191231480
64251 chr8 86089708 86089708 1 + G C rs4150841 86089708 + 86089688 86089728 41 GCAGGCGCCGGCAGGGCAGGGGCAGGGCCAGCGGCCGCCGC GCAGGCGCCGGCAGGGCAGGCGCAGGGCCAGCGGCCGCCGC Direct Gain 0 0.957871094350728 0 0.712374329566956 prediction 0.915742188701457 Functional Gain - E2F5 ENSG00000133740 CDS Human protein_coding chr8:86089708 chr8:86089708 nonsynonymous SNV 0.110 0 21 hm5C_associated_SNPs_130775 0 0 1 DDX3X POSTAR2 ENCODE chr8:86089607-86089736
64251 chr4 140375467 140375467 1 + G C PRAD 140375467 + 140375447 140375487 41 TCTTCAAGATAATCGTGATCGGCGACTCCAATGTGGGCAAG TCTTCAAGATAATCGTGATCCGCGACTCCAATGTGGGCAAG Direct Gain 0 0.957841595266529 0 0.186826556921005 prediction 0.915683190533057 Functional Gain - RAB33B ENSG00000172007 CDS Human protein_coding chr4:140375467 chr4:140375467 nonsynonymous SNV 0.998 5 21 hm5C_associated_SNPs_130776 0 0 7 CPSF6 POSTAR2 GSE37401,GSM917664 chr4:140375453-140375476
64251 chr16 4387924 4387924 1 - T G rs189481658 4387924 - 4387904 4387944 41 AGGGGGAGCCTGGTGCTAGCAGGGAGGGCAGATGCCACCCC AGGGGGAGCCTGGTGCTAGCCGGGAGGGCAGATGCCACCCC Direct Gain 0 0.9577177053999 0 0.962738335132599 prediction 0.9154354107998 Functional Gain - GLIS2 ENSG00000126603 UTR3 Human protein_coding chr16:4387924 chr16:4387924 . . 0 21 hm5C_associated_SNPs_130783 1 0 1 CSTF2T POSTAR2 ENCODE chr16:4387924-4388023
64251 chr20 48569163 48569163 1 + T C rs564138097 48569163 + 48569143 48569183 41 CTGAAGCTCCCGCTGGGCTGTGGGGTTGCCAGAAGCTGGGG CTGAAGCTCCCGCTGGGCTGCGGGGTTGCCAGAAGCTGGGG Direct Gain 0 0.957707735376761 0 0.851065397262573 prediction 0.915415470753521 Functional Gain - RNF114 ENSG00000124226 UTR3 Human protein_coding chr20:48569163 chr20:48569163 . . 0 21 hm5C_associated_SNPs_130784 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714640 chr20:48569140-48569175
64251 chr17 40947334 40947334 1 - T G UCEC 40947334 - 40947314 40947354 41 CCAGGAGCAACGGGAGGGGGAAGGGGCAGGCTAGGGAGGGG CCAGGAGCAACGGGAGGGGGCAGGGGCAGGCTAGGGAGGGG Direct Gain 0 0.95769837923922 0 0.815137684345245 prediction 0.91539675847844 Functional Gain - WNK4 ENSG00000126562 CDS Human protein_coding chr17:40947334 chr17:40947334 synonymous SNV . 0 21 hm5C_associated_SNPs_130785 0 0 1 FAM120A POSTAR2 ENCODE chr17:40947232-40947349
64251 chr10 27793366 27793366 1 + G C LIHC 27793366 + 27793346 27793386 41 GAGTGGGGTGGGCAAGTCCAGGTGAGGCGGAGGTGCGGGTC GAGTGGGGTGGGCAAGTCCACGTGAGGCGGAGGTGCGGGTC Direct Gain 0 0.957466049290801 0 0.557161808013916 prediction 0.914932098581603 Functional Gain - RAB18 ENSG00000099246 CDS Human protein_coding chr10:27793366 chr10:27793366 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_130798 0 0 8 PPIG POSTAR2 ENCODE chr10:27793318-27793368
64251 chr1 248059216 248059216 1 + G C HNSC 248059216 + 248059196 248059236 41 TGTTCCTGGGTCTGGGTGGTGTGGAGTGCCTGCTTCTGGCT TGTTCCTGGGTCTGGGTGGTCTGGAGTGCCTGCTTCTGGCT Direct Gain 0 0.957393718863766 0 0.71773236989975 prediction 0.914787437727531 Functional Gain - OR2W3 ENSG00000238243 CDS Human protein_coding chr1:248059216 chr1:248059216 nonsynonymous SNV 0.968 1 21 hm5C_associated_SNPs_130801 0 0 2 NONO POSTAR2 ENCODE chr1:248059214-248059271
64251 chr2 108917374 108917374 1 + T C LUSC 108917374 + 108917354 108917394 41 AGCTGCTGCCACCGTCTTTCTGGGAAAACAACTGCAAGGTA AGCTGCTGCCACCGTCTTTCCGGGAAAACAACTGCAAGGTA Direct Gain 0 0.957004448319482 0 0.863787949085236 prediction 0.914008896638963 Functional Gain - SULT1C2 ENSG00000198203 CDS Human protein_coding chr2:108917374 chr2:108917374 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_130828 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:108917371-108917409
64251 chr4 26426000 26426000 1 + A C STAD 26426000 + 26425980 26426020 41 AACAAAGGTGGCTCTGTTTAATCGACTACGATCCCAGACAG AACAAAGGTGGCTCTGTTTACTCGACTACGATCCCAGACAG Direct Gain 0 0.956890374562831 0 0.865353941917419 prediction 0.913780749125662 Functional Gain - RBPJ ENSG00000168214 CDS Human protein_coding chr4:26426000 chr4:26426000 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_130835 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr4:26425976-26426009
64251 chr7 99751610 99751610 1 + G C rs77496317 99751610 + 99751590 99751630 41 CTGCCGGAGGGCGAGGGTCGGAGAAGCGGATTGGGTCCTGG CTGCCGGAGGGCGAGGGTCGCAGAAGCGGATTGGGTCCTGG Direct Gain 0 0.95685555411519 0 0.786463737487793 prediction 0.91371110823038 Functional Gain - LAMTOR4 ENSG00000188186 UTR3 Human protein_coding chr7:99751610 chr7:99751610 . . 0 21 hm5C_associated_SNPs_130837 0 0 23 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:99751579-99751610
64251 chr1 70904459 70904459 1 + G C PCPG 70904459 + 70904439 70904479 41 TTCGACTTTCTGTGGGCTTAGAGGATGAGGAAGACCTACTG TTCGACTTTCTGTGGGCTTACAGGATGAGGAAGACCTACTG Direct Gain 0 0.9567530041667 0 0.751049399375916 prediction 0.913506008333399 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70904459 chr1:70904459 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_130842 0 0 9 TARDBP POSTAR2 DRA001158,DRS012387 chr1:70904429-70904468
64251 chr11 125496665 125496665 1 + T C LUSC 125496665 + 125496645 125496685 41 CGAGGTGCTCGGTGGAGTCATGGCAGTGCCCTTTGTGGAAG CGAGGTGCTCGGTGGAGTCACGGCAGTGCCCTTTGTGGAAG Direct Gain 0 0.956668343603725 0 0.686904907226562 prediction 0.91333668720745 Functional Gain - CHEK1 ENSG00000149554 CDS Human protein_coding chr11:125496665 chr11:125496665 nonsynonymous SNV 0.933 4 21 hm5C_associated_SNPs_130848 0 0 16 TARDBP POSTAR2 DRA001158,DRS012387 chr11:125496648-125496679
64251 chr7 30200889 30200889 1 + T C rs111454409 30200889 + 30200869 30200909 41 AATAAGGGAGAATGGGAGAGTTGGGGTCTGACAGTTACCAC AATAAGGGAGAATGGGAGAGCTGGGGTCTGACAGTTACCAC Direct Gain 0 0.956612419770945 0 0.477876663208008 prediction 0.913224839541889 Functional Gain - MTURN ENSG00000180354 UTR3 Human protein_coding chr7:30200889 chr7:30200889 . . 0 21 hm5C_associated_SNPs_130853 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:30200872-30200901
64251 chr5 176085623 176085623 1 + G C rs76178706 176085623 + 176085603 176085643 41 CAAGAGAGTGCGGTGGGGATGGGGGGGAGAGCACGGGTCCC CAAGAGAGTGCGGTGGGGATCGGGGGGAGAGCACGGGTCCC Direct Gain 0 0.956521633664644 0 0.983733355998993 prediction 0.913043267329288 Functional Gain - TSPAN17 ENSG00000048140 UTR3 Human protein_coding chr5:176085623 chr5:176085623 . . 0 21 hm5C_associated_SNPs_130859 0 0 2 UCHL5 POSTAR2 ENCODE chr5:176085583-176085676
64251 chr18 10550121 10550121 1 + G C rs2305370 10550121 + 10550101 10550141 41 GTTCCAGGAGGGGGAATCAAGAAGAAATCACCTGCAACACC GTTCCAGGAGGGGGAATCAACAAGAAATCACCTGCAACACC Direct Gain 0 0.956507952994657 0 0.817528426647186 prediction 0.913015905989315 Functional Gain - NAPG ENSG00000134265 CDS Human protein_coding chr18:10550121 chr18:10550121 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_130860 0 0 1 FUS POSTAR2 GSE40653,GSM998875 chr18:10550120-10550140
64251 chr12 120650328 120650328 1 + T C LUAD 120650328 + 120650308 120650348 41 CGTGGTAGTGCACCTCACAGTAGGGCTGCCCGTCGTGCTCG CGTGGTAGTGCACCTCACAGCAGGGCTGCCCGTCGTGCTCG Direct Gain 0 0.956479922801764 0 0.84460324048996 prediction 0.912959845603528 Functional Gain - PXN ENSG00000089159 CDS Human protein_coding chr12:120650328 chr12:120650328 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_130861 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr12:120650328-120650329
64251 chrX 12809712 12809712 1 + G C BLCA 12809712 + 12809692 12809732 41 GAGCTGGGCAAGGTGGTCACGAAGAAGTTCAGCAACCAGGA GAGCTGGGCAAGGTGGTCACCAAGAAGTTCAGCAACCAGGA Direct Gain 0 0.956458153435812 0 0.586598694324493 prediction 0.912916306871624 Functional Gain - PRPS2 ENSG00000101911 CDS Human protein_coding chrX:12809712 chrX:12809712 synonymous SNV . 0 21 hm5C_associated_SNPs_130862 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:12809677-12809712
64251 chr10 101469947 101469947 1 - A G rs115283180 101469947 - 101469927 101469967 41 AAATGCCGGCAAGTGCTCTGTAGGAGGGGCCACTTAGGAAA AAATGCCGGCAAGTGCTCTGCAGGAGGGGCCACTTAGGAAA Direct Gain 0 0.956429184743304 0 0.90438586473465 prediction 0.912858369486608 Functional Gain - ENTPD7 ENSG00000198018;ENSG00000014919 intergenic Human other chr10:101469947 chr10:101469947 . . 0 21 hm5C_associated_SNPs_130863 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350201 chr10:101469936-101469957
64251 chr10 70932191 70932191 1 + A C rs11552063 70932191 + 70932171 70932211 41 ACCAAAATGAAACCTGCTGTATGGAAACTACTTTCACTTAT ACCAAAATGAAACCTGCTGTCTGGAAACTACTTTCACTTAT Direct Gain 0 0.956426238502248 0 0.833877861499786 prediction 0.912852477004495 Functional Gain - VPS26A ENSG00000122958 UTR3 Human protein_coding chr10:70932191 chr10:70932191 . . 0 21 hm5C_associated_SNPs_130864 0 0 13 ATXN2 POSTAR2 DRA001158,DRS012391 chr10:70932103-70932220
64251 chr19 15807861 15807861 1 + T C COAD 15807861 + 15807841 15807881 41 CGCCGAGGGCGGGCTTTGGCTGCGGGTGGAGCCCCTGAATG CGCCGAGGGCGGGCTTTGGCCGCGGGTGGAGCCCCTGAATG Direct Gain 0 0.956414417940837 0 0.947697639465332 prediction 0.912828835881674 Functional Gain - CYP4F12 ENSG00000186204 CDS Human protein_coding chr19:15807861 chr19:15807861 nonsynonymous SNV 0.942 4 21 hm5C_associated_SNPs_130865 0 0 2 LSM11 POSTAR2 ENCODE chr19:15807840-15807932
64251 chr12 7045160 7045160 1 + G C rs139909258 7045160 + 7045140 7045180 41 GGGGAGGGGCTGCCTCATCAGTGGGGGGCCCTAATGGGGGT GGGGAGGGGCTGCCTCATCACTGGGGGGCCCTAATGGGGGT Direct Gain 0 0.956387540733603 0 0.823957324028015 prediction 0.912775081467206 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045160 chr12:7045160 nonsynonymous SNV 0.756 0 21 hm5C_associated_SNPs_130866 0 0 11 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr12:7045080-7045160
64251 chr10 13629129 13629129 1 + G C UCEC 13629129 + 13629109 13629149 41 TCCTTCGGAAGCGGCAGCTGGTGGAGGACAGGAACCTGCTG TCCTTCGGAAGCGGCAGCTGCTGGAGGACAGGAACCTGCTG Direct Gain 0 0.95631381002392 0 0.825000643730164 prediction 0.912627620047839 Functional Gain - PRPF18 ENSG00000165630 CDS Human protein_coding chr10:13629129 chr10:13629129 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_130871 0 0 2 DDX3X POSTAR2 ENCODE chr10:13629064-13629149
64251 chr7 86782073 86782073 1 + T C rs545072108 86782073 + 86782053 86782093 41 TCCGGCCAGGGCCTCCCTCTTAGGGCCGGGCGGTGCCCGTG TCCGGCCAGGGCCTCCCTCTCAGGGCCGGGCGGTGCCCGTG Direct Gain 0 0.956263895623803 0 0.966274976730347 prediction 0.912527791247606 Functional Gain - DMTF1 ENSG00000135164 UTR5 Human protein_coding chr7:86782073 chr7:86782073 . . 0 21 hm5C_associated_SNPs_130874 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr7:86782073-86782106
64251 chr12 7045608 7045608 1 - C G BLCA 7045608 - 7045588 7045628 41 GGAAGGGGGAGGCAGAGGAAGAGGAGGAAGAACTGGAAGAG GGAAGGGGGAGGCAGAGGAACAGGAGGAAGAACTGGAAGAG Direct Gain 0 0.956173231458279 0 0.775971651077271 prediction 0.912346462916558 Functional Gain - ATN1 ENSG00000111676 CDS Human protein_coding chr12:7045608 chr12:7045608 nonsynonymous SNV 0.914 1 21 hm5C_associated_SNPs_130884 0 0 2 HNRNPH1 POSTAR2 GSE23694,GSM581051 chr12:7045580-7045620
64251 chr20 4680497 4680497 1 + G C LUAD 4680497 + 4680477 4680517 41 AGATGATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCAG AGATGATGGAGCGCGTGGTTCAGCAGATGTGTATCACCCAG Direct Gain 0 0.956137901516318 0 0.719736933708191 prediction 0.912275803032635 Functional Gain - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680497 chr20:4680497 nonsynonymous SNV 0.986 4 21 hm5C_associated_SNPs_130886 1 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:4680449-4680497
64251 chr16 30770770 30770770 1 + A C rs139907701 30770770 + 30770750 30770790 41 TTTGAAGAGGTCGATGCTGAAAGGAGGCCGCTGTGGTGGTG TTTGAAGAGGTCGATGCTGACAGGAGGCCGCTGTGGTGGTG Direct Gain 0 0.956096995444449 0 0.745873987674713 prediction 0.912193990888899 Functional Gain - CCDC189 ENSG00000196118 CDS Human protein_coding chr16:30770770 chr16:30770770 nonsynonymous SNV 0.996 3 21 hm5C_associated_SNPs_130890 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350197 chr16:30770757-30770831
64251 chr3 195391115 195391115 1 + T C rs28401477 195391115 + 195391095 195391135 41 TCAATATTGCACACCTTATATGGGAGGGTAAGGCTGCCCCC TCAATATTGCACACCTTATACGGGAGGGTAAGGCTGCCCCC Direct Gain 0 0.956069147713798 0 0.921756267547607 prediction 0.912138295427595 Functional Gain - SDHAP2 ENSG00000215837;ENSG00000242086 ncRNA_exonic Human other chr3:195391115 chr3:195391115 . . 0 21 hm5C_associated_SNPs_130892 0 0 8 BUD13 POSTAR2 ENCODE chr3:195391106-195391152
64251 chr7 79764527 79764527 1 + G C SKCM 79764527 + 79764507 79764547 41 GCGGCGGTGGAGCGGAGTAAGATGATCGACCGCAACCTCCG GCGGCGGTGGAGCGGAGTAACATGATCGACCGCAACCTCCG Direct Gain 0 0.956051587610466 0 0.387688875198364 prediction 0.912103175220932 Functional Gain - GNAI1 ENSG00000127955 CDS Human protein_coding chr7:79764527 chr7:79764527 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_130894 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819211 chr7:79764527-79764528
64251 chr2 54014459 54014459 1 + A C CESC 54014459 + 54014439 54014479 41 GCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTTTCCGA GCCGAGCCCTTCCTCAACTCCGCGATGACATCCCTTTCCGA Direct Gain 0 0.956009120126797 0 0.851125121116638 prediction 0.912018240253594 Functional Gain - ERLEC1 ENSG00000068912 CDS Human protein_coding chr2:54014459 chr2:54014459 nonsynonymous SNV 0.955 2 21 hm5C_associated_SNPs_130899 0 0 2 DDX3X POSTAR2 ENCODE chr2:54014330-54014461
64251 chr3 13547169 13547169 1 + G C rs560815051 13547169 + 13547149 13547189 41 GTTCCTGGAGAGAGGGCAGCGAGGATCTCTATCCTGGCCTG GTTCCTGGAGAGAGGGCAGCCAGGATCTCTATCCTGGCCTG Direct Gain 0 0.955882915436346 0 0.816800117492676 prediction 0.911765830872692 Functional Gain - HDAC11 ENSG00000163517 UTR3 Human protein_coding chr3:13547169 chr3:13547169 . . 0 21 hm5C_associated_SNPs_130911 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012391 chr3:13547167-13547192
64251 chr11 20409598 20409598 1 + T C UCEC 20409598 + 20409578 20409618 41 TGTGGAGAATGAGGAGGACCTGCCAGAACTGTCGGACAGCG TGTGGAGAATGAGGAGGACCCGCCAGAACTGTCGGACAGCG Direct Gain 0 0.955801563020124 0 0.494216501712799 prediction 0.911603126040249 Functional Gain - PRMT3 ENSG00000185238 CDS Human protein_coding chr11:20409598 chr11:20409598 nonsynonymous SNV 0.876 0 21 hm5C_associated_SNPs_130922 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr11:20409547-20409608
64251 chr15 90170920 90170920 1 + A C rs76530445 90170920 + 90170900 90170940 41 TCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAGCCAGC TCTGGAGCAGCCACATTTTCCAGGACTGTCCAAGAGCCAGC Direct Gain 0 0.955302831773875 0 0.790501117706299 prediction 0.91060566354775 Functional Gain - TICRR ENSG00000140534 UTR3 Human protein_coding chr15:90170920 chr15:90170920 . . 0 21 hm5C_associated_SNPs_130944 0 0 25 HNRNPC POSTAR2 GSE56010,GSM1350201 chr15:90170803-90170969
64251 chrX 11133059 11133059 1 + A C COAD 11133059 + 11133039 11133079 41 AGTACGTGGAGTGTCCCATTAGGGGCACTGCGGCTGAGAAT AGTACGTGGAGTGTCCCATTCGGGGCACTGCGGCTGAGAAT Direct Gain 0 0.955177181072281 0 0.952654480934143 prediction 0.910354362144562 Functional Gain - HCCS ENSG00000004961 CDS Human protein_coding chrX:11133059 chrX:11133059 synonymous SNV . 0 21 hm5C_associated_SNPs_130950 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chrX:11133058-11133079
64251 chr12 64798273 64798273 1 + G C rs551306702 64798273 + 64798253 64798293 41 GCGGCGGCTGCGGCGGCGGCGGCGGCGTTAGCCGGCCCTCG GCGGCGGCTGCGGCGGCGGCCGCGGCGTTAGCCGGCCCTCG Direct Gain 0 0.955064393430379 0 0.958928644657135 prediction 0.910128786860758 Functional Gain - XPOT ENSG00000184575 UTR5 Human protein_coding chr12:64798273 chr12:64798273 . . 0 21 hm5C_associated_SNPs_130961 0 0 10 EIF3G POSTAR2 GSE65004,GSM1585674 chr12:64798241-64798273
64251 chr13 113909065 113909065 1 + A C UCEC 113909065 + 113909045 113909085 41 GGTGCTCCTCATGTTCAACGAGGGAGATGGCTTCAGCTTTG GGTGCTCCTCATGTTCAACGCGGGAGATGGCTTCAGCTTTG Direct Gain 0 0.955045040334652 0 0.864585220813751 prediction 0.910090080669303 Functional Gain - CUL4A ENSG00000139842 CDS Human protein_coding chr13:113909065 chr13:113909065 nonsynonymous SNV 0.734 1 21 hm5C_associated_SNPs_130963 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714639 chr13:113909061-113909090
64251 chr12 98943078 98943078 1 + A C rs28535939 98943078 + 98943058 98943098 41 AGTGGCACGATCTGGGCTCGATGCAACCTCTGCCTCCCAGG AGTGGCACGATCTGGGCTCGCTGCAACCTCTGCCTCCCAGG Direct Gain 0 0.954966539594573 0 0.303528815507889 prediction 0.909933079189146 Functional Gain - TMPO ENSG00000120802 UTR3 Human protein_coding chr12:98943078 chr12:98943078 . . 0 21 hm5C_associated_SNPs_130969 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:98943066-98943098
64251 chr19 37581993 37581993 1 + T C ESCA 37581993 + 37581973 37582013 41 ATTTGTATAGAGATGTGATGTTGGAGAACTATAGCAACTTG ATTTGTATAGAGATGTGATGCTGGAGAACTATAGCAACTTG Direct Gain 0 0.954859440218352 0 0.788946628570557 prediction 0.909718880436704 Functional Gain - ZNF420 ENSG00000197050 CDS Human protein_coding chr19:37581993 chr19:37581993 synonymous SNV . 0 21 hm5C_associated_SNPs_130974 0 0 6 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:37581936-37582011
64251 chr5 7889311 7889311 1 + T C COAD 7889311 + 7889291 7889331 41 AGCCGATTATAGCCGCTTTGTACGAGATGCCTGTGCCTGCT AGCCGATTATAGCCGCTTTGCACGAGATGCCTGTGCCTGCT Direct Gain 0 0.954805384588971 0 0.667982280254364 prediction 0.909610769177942 Functional Gain - MTRR ENSG00000124275 CDS Human protein_coding chr5:7889311 chr5:7889311 nonsynonymous SNV 0.002 1 21 hm5C_associated_SNPs_130984 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr5:7889298-7889340
64251 chr1 63876858 63876858 1 + T C LGG 63876858 + 63876838 63876878 41 CTTTGCTTTGTGGGGTGTTCTTGGAATATCTTGTGACTGCG CTTTGCTTTGTGGGGTGTTCCTGGAATATCTTGTGACTGCG Direct Gain 0 0.954719826928029 0 0.903459966182709 prediction 0.909439653856058 Functional Gain - ALG6 ENSG00000088035 CDS Human protein_coding chr1:63876858 chr1:63876858 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_130987 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:63876815-63876858
64251 chr12 68051371 68051371 1 + T C UCEC 68051371 + 68051351 68051391 41 TATGAGGTCCTCAAGGTCATTGGGAAGGGGAGCTTTGGGCA TATGAGGTCCTCAAGGTCATCGGGAAGGGGAGCTTTGGGCA Direct Gain 0 0.954466390057117 0 0.821631133556366 prediction 0.908932780114235 Functional Gain - DYRK2 ENSG00000127334 CDS Human protein_coding chr12:68051371 chr12:68051371 synonymous SNV . 0 21 hm5C_associated_SNPs_131001 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714639 chr12:68051360-68051380
64251 chr11 125439423 125439423 1 + T C rs3017281 125439423 + 125439403 125439443 41 GCGCCCCGGCGGAGCTGGCCTGCGGTGGGCTAGGGGCAGGG GCGCCCCGGCGGAGCTGGCCCGCGGTGGGCTAGGGGCAGGG Direct Gain 0 0.954364788742498 0 0.796232461929321 prediction 0.908729577484996 Functional Gain - EI24 ENSG00000149547 UTR5 Human protein_coding chr11:125439423 chr11:125439423 . . 0 21 hm5C_associated_SNPs_131006 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819212 chr11:125439400-125439440
64251 chr2 232576099 232576099 1 + T C SKCM 232576099 + 232576079 232576119 41 GTTGTGGAAGAGGCAGAAAATGGAAGAGACGCCCCTGCTAA GTTGTGGAAGAGGCAGAAAACGGAAGAGACGCCCCTGCTAA Direct Gain 0 0.954308180556298 0 0.927837014198303 prediction 0.908616361112595 Functional Gain - PTMA ENSG00000187514 CDS Human protein_coding chr2:232576099 chr2:232576099 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_131008 0 0 7 CDC40 POSTAR2 ENCODE chr2:232576094-232576162
64251 chr20 814504 814504 1 + T C rs138802520 814504 + 814484 814524 41 TGGGGCCTCCTGGGCGTCGTTGGGAGCGGCCACTACCGGCC TGGGGCCTCCTGGGCGTCGTCGGGAGCGGCCACTACCGGCC Direct Gain 0 0.954291701012632 0 0.981836915016174 prediction 0.908583402025265 Functional Gain - FAM110A ENSG00000125898 UTR5 Human protein_coding chr20:814504 chr20:814504 . . 0 21 hm5C_associated_SNPs_131009 0 0 1 DDX3X POSTAR2 ENCODE chr20:814371-814594
64251 chr8 418940 418940 1 + T C rs111466889 418940 + 418920 418960 41 CCTGGGAAGAACTGCCCTTCTGCAAAGGGGGGACTGCATGG CCTGGGAAGAACTGCCCTTCCGCAAAGGGGGGACTGCATGG Direct Gain 0 0.954266660271217 0 0.861603379249573 prediction 0.908533320542435 Functional Gain - FBXO25 ENSG00000147364 UTR3 Human protein_coding chr8:418940 chr8:418940 . . 0 21 hm5C_associated_SNPs_131011 0 0 4 CSTF2T POSTAR2 GSE37401,GSM917677 chr8:418912-418942
64251 chr2 37429725 37429725 1 + T C rs367610537 37429725 + 37429705 37429745 41 TTGAACATGGGAGATGGAGGTTGCAGTGAGCCAAGATCATG TTGAACATGGGAGATGGAGGCTGCAGTGAGCCAAGATCATG Direct Gain 0 0.954262100495374 0 0.28173553943634 prediction 0.908524200990749 Functional Gain - CEBPZOS ENSG00000218739 UTR3 Human protein_coding chr2:37429725 chr2:37429725 . . 0 21 hm5C_associated_SNPs_131012 0 0 2 ILF3 POSTAR2 ENCODE chr2:37429660-37429753
64251 chr7 150772765 150772765 1 + T C UCEC 150772765 + 150772745 150772785 41 CTTTGGAATTTTCCTGTACATGGGAGTCACCTCCCTTAACG CTTTGGAATTTTCCTGTACACGGGAGTCACCTCCCTTAACG Direct Gain 0 0.954014918867132 0 0.73492294549942 prediction 0.908029837734263 Functional Gain - SLC4A2 ENSG00000164889 CDS Human protein_coding chr7:150772765 chr7:150772765 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_131027 0 0 2 IGF2BP1 POSTAR2 GSE21578,GSM545206 chr7:150772742-150772774
64251 chr12 90102940 90102940 1 - C G rs528909427 90102940 - 90102920 90102960 41 CTTGCAGGCCACCCGGTGCAGACGGGGTCCCTGCCCGGAGC CTTGCAGGCCACCCGGTGCACACGGGGTCCCTGCCCGGAGC Direct Gain 0 0.953916304242255 0 0.544201731681824 prediction 0.907832608484511 Functional Gain - ATP2B1-AS1 ENSG00000271614 ncRNA_exonic Human lincRNA chr12:90102940 chr12:90102940 . . 0 21 hm5C_associated_SNPs_131031 0 0 3 EFTUD2 POSTAR2 ENCODE chr12:90102885-90102944
64251 chr9 140130649 140130649 1 - C G rs554704709 140130649 - 140130629 140130669 41 AGGACAGTAACCAGGATGACGAGGAGCACCAGCCCCACCAG AGGACAGTAACCAGGATGACCAGGAGCACCAGCCCCACCAG Direct Gain 0 0.953843410733312 0 0.924439251422882 prediction 0.907686821466624 Functional Gain - SLC34A3 ENSG00000198569 CDS Human protein_coding chr9:140130649 chr9:140130649 synonymous SNV . 0 21 hm5C_associated_SNPs_131039 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr9:140130639-140130664
64251 chr1 146714354 146714354 1 + A C rs147494800 146714354 + 146714334 146714374 41 GCGGGGCCTCTACCGGCCCGATGGAGCGCGCGGGCGCTACT GCGGGGCCTCTACCGGCCCGCTGGAGCGCGCGGGCGCTACT Direct Gain 0 0.953687347143955 0 0.858510434627533 prediction 0.907374694287911 Functional Gain - CHD1L ENSG00000131778 CDS Human protein_coding chr1:146714354 chr1:146714354 nonsynonymous SNV 0.010 1 21 hm5C_associated_SNPs_131048 0 0 15 DDX3X POSTAR2 GSE70804,GSM1819212 chr1:146714340-146714360
64251 chr10 76938897 76938897 1 + A C rs148068790 76938897 + 76938877 76938917 41 ATCACTTGAGCTCAGGTAAAAGAGACCAGCCTGGGCAACAA ATCACTTGAGCTCAGGTAAACGAGACCAGCCTGGGCAACAA Direct Gain 0 0.953653643758193 0 0.751828551292419 prediction 0.907307287516387 Functional Gain - SAMD8 ENSG00000156671 UTR3 Human protein_coding chr10:76938897 chr10:76938897 . . 0 21 hm5C_associated_SNPs_131051 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr10:76938897-76938898
64251 chr1 110883998 110883998 1 + T C COAD 110883998 + 110883978 110884018 41 CGTCATCTGGATAGGTCTCCTGAGAGTGACCGCCCACGAAA CGTCATCTGGATAGGTCTCCCGAGAGTGACCGCCCACGAAA Direct Gain 0 0.953641309880966 0 0.951790869235992 prediction 0.907282619761932 Functional Gain - RBM15 ENSG00000162775 CDS Human protein_coding chr1:110883998 chr1:110883998 synonymous SNV . 0 21 hm5C_associated_SNPs_131052 0 0 5 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr1:110883960-110884000
64251 chr11 44135765 44135765 1 + G C BLCA 44135765 + 44135745 44135785 41 GCTGGTGGCGGCTTTTCTACGTGGACTTACCGGCAAGGCTA GCTGGTGGCGGCTTTTCTACCTGGACTTACCGGCAAGGCTA Direct Gain 0 0.953591772243218 0 0.724264442920685 prediction 0.907183544486435 Functional Gain - EXT2 ENSG00000151348 CDS Human protein_coding chr11:44135765 chr11:44135765 synonymous SNV . 0 21 hm5C_associated_SNPs_131054 0 0 7 EIF3D POSTAR2 GSE65004,GSM1585671 chr11:44135755-44135776
64251 chr20 4680302 4680302 1 + G C BLCA 4680302 + 4680282 4680322 41 TACATTTCGGCAGTGACTATGAGGACCGTTACTATCGTGAA TACATTTCGGCAGTGACTATCAGGACCGTTACTATCGTGAA Direct Gain 0 0.953587540901059 0 0.927941560745239 prediction 0.907175081802118 Functional Gain - PRNP ENSG00000171867 CDS Human protein_coding chr20:4680302 chr20:4680302 nonsynonymous SNV 1.000 5 21 hm5C_associated_SNPs_131055 0 0 10 YTHDF2 POSTAR2 GSE49339,GSM1197606 chr20:4680270-4680317
64251 chr1 110527620 110527620 1 + A C rs536442460 110527620 + 110527600 110527640 41 CGGGCAGGCGGGCGGGCGCCAGAGGGGGAAAGAGGCGGGGG CGGGCAGGCGGGCGGGCGCCCGAGGGGGAAAGAGGCGGGGG Direct Gain 0 0.953536521935087 0 0.873738408088684 prediction 0.907073043870174 Functional Gain - AHCYL1 ENSG00000168710 UTR5 Human protein_coding chr1:110527620 chr1:110527620 . . 0 21 hm5C_associated_SNPs_131057 0 0 14 DDX3X POSTAR2 ENCODE chr1:110527543-110527698
64251 chr4 107268813 107268813 1 + T C UCEC 107268813 + 107268793 107268833 41 GTGAAAGGGAAGGGAGTATGTAGGGCTCAAACCATGAGCAA GTGAAAGGGAAGGGAGTATGCAGGGCTCAAACCATGAGCAA Direct Gain 0 0.953374435000884 0 0.765982270240784 prediction 0.906748870001768 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107268813 chr4:107268813 synonymous SNV . 0 21 hm5C_associated_SNPs_131063 0 0 13 CPSF7 POSTAR2 GSE37401,GSM917663 chr4:107268794-107268826
64251 chr20 36573330 36573330 1 + A C rs11550660 36573330 + 36573310 36573350 41 CTGTCACACGGCGAGTCAGAAGGGAGGGGCCTTTCCCTCGG CTGTCACACGGCGAGTCAGACGGGAGGGGCCTTTCCCTCGG Direct Gain 0 0.953349845390719 0 0.898575782775879 prediction 0.906699690781438 Functional Gain - VSTM2L ENSG00000132821 UTR3 Human protein_coding chr20:36573330 chr20:36573330 . . 0 21 hm5C_associated_SNPs_131064 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:36573314-36573368
64251 chr15 35270996 35270996 1 - C G rs7165312 35270996 - 35270976 35271016 41 ATTTTTGGTATCTGTGGGTTGGGGGGACGGTCCAGGAACCA ATTTTTGGTATCTGTGGGTTCGGGGGACGGTCCAGGAACCA Direct Gain 0 0.953317260267654 0 0.866086602210999 prediction 0.906634520535308 Functional Gain - ZNF770 ENSG00000212768;ENSG00000198146 UTR5;UTR3 Human other chr15:35270996 chr15:35270996 . . 0 21 hm5C_associated_SNPs_131068 0 0 32 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:35270976-35271016
64251 chr19 45762390 45762390 1 + T C STAD 45762390 + 45762370 45762410 41 TACCGCCTGCTGAGGACCATTGGGAAGGGCAACTTTGCCAA TACCGCCTGCTGAGGACCATCGGGAAGGGCAACTTTGCCAA Direct Gain 0 0.953265907681195 0 0.961034834384918 prediction 0.90653181536239 Functional Gain - MARK4 ENSG00000007047 CDS Human protein_coding chr19:45762390 chr19:45762390 synonymous SNV . 0 21 hm5C_associated_SNPs_131071 0 0 3 NCBP3 POSTAR2 GSE38201,GSM936507 chr19:45762374-45762394
64251 chr7 44841888 44841888 1 + T C rs7784201 44841888 + 44841868 44841908 41 CTCCTGAGTAGCTGGGATAATGGGCGTGTGCCACCATGCCC CTCCTGAGTAGCTGGGATAACGGGCGTGTGCCACCATGCCC Direct Gain 0 0.953262446375181 0 0.800806999206543 prediction 0.906524892750362 Functional Gain - PPIA ENSG00000196262 UTR3 Human protein_coding chr7:44841888 chr7:44841888 . . 0 21 hm5C_associated_SNPs_131072 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr7:44841849-44841895
64251 chr1 25688137 25688137 1 + A C rs28667288 25688137 + 25688117 25688157 41 AGGCTCCCCACCTCTGCAAGATGGGATACACTCTTCAGGAC AGGCTCCCCACCTCTGCAAGCTGGGATACACTCTTCAGGAC Direct Gain 0 0.953203643709341 0 0.648727178573608 prediction 0.906407287418681 Functional Gain - TMEM50A ENSG00000183726 UTR3 Human protein_coding chr1:25688137 chr1:25688137 . . 0 21 hm5C_associated_SNPs_131077 0 0 10 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr1:25688132-25688247
64251 chr1 33237239 33237239 1 - C G rs114127179 33237239 - 33237219 33237259 41 TCTGCAAAGCAGTAGCTGAGGAGGACGAAGCAGCCGGGGAG TCTGCAAAGCAGTAGCTGAGCAGGACGAAGCAGCCGGGGAG Direct Gain 0 0.953186866184055 0 0.565075993537903 prediction 0.90637373236811 Functional Gain - KIAA1522 ENSG00000162522 CDS Human protein_coding chr1:33237239 chr1:33237239 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_131079 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:33237233-33237252
64251 chr1 48705022 48705022 1 + T C STAD 48705022 + 48705002 48705042 41 CTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGTA CTGGGGCCTCGTGTTTGGCCCGGGAGTGGGGCTTCTGCGTA Direct Gain 0 0.953092606375263 0 0.481518119573593 prediction 0.906185212750526 Functional Gain - SLC5A9 ENSG00000117834 CDS Human protein_coding chr1:48705022 chr1:48705022 nonsynonymous SNV 0.997 4 21 hm5C_associated_SNPs_131085 0 0 2 EFTUD2 POSTAR2 ENCODE chr1:48705017-48705040
64251 chr19 13059132 13059132 1 + G C BLCA 13059132 + 13059112 13059152 41 GAGAGGACAAGAGCCCATCAGAGGAATCCGCCCCCACGACG GAGAGGACAAGAGCCCATCACAGGAATCCGCCCCCACGACG Direct Gain 0 0.953077785465769 0 0.856603622436523 prediction 0.906155570931538 Functional Gain - RAD23A ENSG00000179262 CDS Human protein_coding chr19:13059132 chr19:13059132 nonsynonymous SNV 0.590 0 21 hm5C_associated_SNPs_131087 0 0 4 CELF2 POSTAR2 GSE71264,GSM1831618 chr19:13059120-13059140
64251 chr3 45046805 45046805 1 + G C LUSC 45046805 + 45046785 45046825 41 TACCAAGGGTTCGAGTTTTGGAGGATGAAGAGGGGTCGAAG TACCAAGGGTTCGAGTTTTGCAGGATGAAGAGGGGTCGAAG Direct Gain 0 0.953073246471123 0 0.789115786552429 prediction 0.906146492942246 Functional Gain - EXOSC7 ENSG00000075914 CDS Human protein_coding chr3:45046805 chr3:45046805 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_131088 0 0 13 TARDBP POSTAR2 DRA001158,DRS012387 chr3:45046788-45046822
64251 chr4 17616293 17616293 1 + G C LGG 17616293 + 17616273 17616313 41 CAAACATGGCGGCTCCACTAGGGGGTATGTTTTCTGGGCAG CAAACATGGCGGCTCCACTACGGGGTATGTTTTCTGGGCAG Direct Gain 0 0.953071915277652 0 0.824283242225647 prediction 0.906143830555303 Functional Gain - MED28 ENSG00000118579 CDS Human protein_coding chr4:17616293 chr4:17616293 nonsynonymous SNV 0.014 2 21 hm5C_associated_SNPs_131089 0 0 10 ATXN2 POSTAR2 DRA001158,DRS012390 chr4:17616270-17616326
64251 chr12 110341781 110341781 1 + G C BLCA 110341781 + 110341761 110341801 41 GAGAAGATGAAGGAGGAGAAGAGGAGGAGTCTGGAGGCCCG GAGAAGATGAAGGAGGAGAACAGGAGGAGTCTGGAGGCCCG Direct Gain 0 0.953029553597626 0 0.654311895370483 prediction 0.906059107195252 Functional Gain - TCHP ENSG00000139437 CDS Human protein_coding chr12:110341781 chr12:110341781 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131090 0 0 9 BUD13 POSTAR2 ENCODE chr12:110341759-110341858
64251 chrX 56590478 56590478 1 + A C COAD 56590478 + 56590458 56590498 41 ACAGCTCGGTTCAGCAGTTTAAGGAAGCGATTTCGAAACGC ACAGCTCGGTTCAGCAGTTTCAGGAAGCGATTTCGAAACGC Direct Gain 0 0.952925076501149 0 0.87222158908844 prediction 0.905850153002299 Functional Gain - UBQLN2 ENSG00000188021 CDS Human protein_coding chrX:56590478 chrX:56590478 nonsynonymous SNV 0.989 5 21 hm5C_associated_SNPs_131094 0 0 9 DDX3X POSTAR2 GSE70804,GSM1819212 chrX:56590460-56590480
64251 chr9 127975748 127975748 1 + T C UCEC 127975748 + 127975728 127975768 41 ACCTGACCGTATCTGGGTATTTGGAGGTGCCAACCAATCAG ACCTGACCGTATCTGGGTATCTGGAGGTGCCAACCAATCAG Direct Gain 0 0.952898572879402 0 0.660279631614685 prediction 0.905797145758803 Functional Gain - RABEPK ENSG00000136933 CDS Human protein_coding chr9:127975748 chr9:127975748 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131095 0 0 1 BUD13 POSTAR2 ENCODE chr9:127975740-127975782
64251 chr2 198570134 198570134 1 + T C rs529228852 198570134 + 198570114 198570154 41 GCGGCCGGTCTGCACCATGCTGCGAACGTCCGTCCTCCGCC GCGGCCGGTCTGCACCATGCCGCGAACGTCCGTCCTCCGCC Direct Gain 0 0.952729304162677 0 0.820395886898041 prediction 0.905458608325353 Functional Gain - MARS2 ENSG00000247626 CDS Human protein_coding chr2:198570134 chr2:198570134 nonsynonymous SNV 0.765 1 21 hm5C_associated_SNPs_131108 0 0 2 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr2:198570120-198570160
64251 chr12 8926115 8926115 1 + T C UCEC 8926115 + 8926095 8926135 41 TCTAGATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCC TCTAGATGTAGCTGGTATCACAGCAGACTATGCCGCCTCCC Direct Gain 0 0.952722978246477 0 0.93584805727005 prediction 0.905445956492955 Functional Gain - RIMKLB ENSG00000166532 CDS Human protein_coding chr12:8926115 chr12:8926115 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131109 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr12:8926087-8926115
64251 chr5 65440340 65440340 1 + G C CESC 65440340 + 65440320 65440360 41 TTTCCTTCCTAGGAGAAATCGAGGAGCTGCGGCTCTACCCC TTTCCTTCCTAGGAGAAATCCAGGAGCTGCGGCTCTACCCC Direct Gain 0 0.952626540340894 0 0.897748708724976 prediction 0.905253080681788 Functional Gain - SREK1 ENSG00000153914 CDS Human protein_coding chr5:65440340 chr5:65440340 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_131115 0 0 11 NUDT21 POSTAR2 GSE37401,GSM917661 chr5:65440306-65440368
64251 chr15 80215978 80215978 1 - A G rs7176433 80215978 - 80215958 80215998 41 CGGTGCTTCGGGACCCGCGCTGGGGGAACCCTGGCGACGGG CGGTGCTTCGGGACCCGCGCCGGGGGAACCCTGGCGACGGG Direct Gain 0 0.952625169111125 0 0.952234983444214 prediction 0.905250338222249 Functional Gain - ST20-AS1 ENSG00000257028 CDS Human other chr15:80215978 chr15:80215978 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_131116 0 0 6 GEMIN5 POSTAR2 ENCODE chr15:80215957-80215983
64251 chr14 21167872 21167872 1 + T C UCEC 21167872 + 21167852 21167892 41 GATTGCAGGGACACAGGAAGTTCCAGGGCACCCAACTGCAG GATTGCAGGGACACAGGAAGCTCCAGGGCACCCAACTGCAG Direct Gain 0 0.952553508685254 0 0.798499941825867 prediction 0.905107017370508 Functional Gain - RNASE4 ENSG00000258818 CDS Human protein_coding chr14:21167872 chr14:21167872 synonymous SNV . 0 21 hm5C_associated_SNPs_131123 0 0 4 RPS3 POSTAR2 ENCODE chr14:21167867-21167911
64251 chr19 30502138 30502138 1 + T C rs145276289 30502138 + 30502118 30502158 41 ATCAGGACGCCTGCAGACATTTACAGGTGGGAGGCGCTCAC ATCAGGACGCCTGCAGACATCTACAGGTGGGAGGCGCTCAC Direct Gain 0 0.952500068849996 0 0.812299251556396 prediction 0.905000137699993 Functional Gain - URI1 ENSG00000105176 CDS Human protein_coding chr19:30502138 chr19:30502138 synonymous SNV . 0 21 hm5C_associated_SNPs_131126 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:30502114-30502178
64251 chr19 40478119 40478119 1 + G C HNSC 40478119 + 40478099 40478139 41 CCTTCCTGGGCCCTGAGCCTGAGGACCTGGAGGACCTGTAC CCTTCCTGGGCCCTGAGCCTCAGGACCTGGAGGACCTGTAC Direct Gain 0 0.952442924117939 0 0.924501299858093 prediction 0.904885848235878 Functional Gain - PSMC4 ENSG00000013275 CDS Human protein_coding chr19:40478119 chr19:40478119 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_131131 0 0 35 DDX3X POSTAR2 GSE70804,GSM1819209 chr19:40478060-40478120
64251 chr1 161719734 161719734 1 + T C UCEC 161719734 + 161719714 161719754 41 CGTCGCGGAGCCAGATCACCTGAGGGAAGCGGGCATCACGG CGTCGCGGAGCCAGATCACCCGAGGGAAGCGGGCATCACGG Direct Gain 0 0.952415842553809 0 0.82866907119751 prediction 0.904831685107619 Functional Gain - DUSP12 ENSG00000081721 CDS Human protein_coding chr1:161719734 chr1:161719734 nonsynonymous SNV 0.607 4 21 hm5C_associated_SNPs_131132 0 0 5 NCBP3 POSTAR2 GSE38201,GSM936507 chr1:161719715-161719737
64251 chr11 93517870 93517870 1 + A C CESC 93517870 + 93517850 93517890 41 GGAGGAGGCGGCGGGGACCGAGGGCGACGCGCAGGAGTGGC GGAGGAGGCGGCGGGGACCGCGGGCGACGCGCAGGAGTGGC Direct Gain 0 0.952327803239528 0 0.960577726364136 prediction 0.904655606479057 Functional Gain - MED17 ENSG00000042429 CDS Human protein_coding chr11:93517870 chr11:93517870 nonsynonymous SNV 0.469 0 21 hm5C_associated_SNPs_131137 0 0 5 BUD13 POSTAR2 ENCODE chr11:93517844-93517964
64251 chr11 58391849 58391849 1 + G C CESC 58391849 + 58391829 58391869 41 TTGGAGATGGTGGTCTCTTTGAGAAGAAGCTGTGGGGCCTA TTGGAGATGGTGGTCTCTTTCAGAAGAAGCTGTGGGGCCTA Direct Gain 0 0.952210538269649 0 0.92942476272583 prediction 0.904421076539298 Functional Gain - CNTF ENSG00000242689 CDS Human protein_coding chr11:58391849 chr11:58391849 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_131146 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350199 chr11:58391846-58391867
64251 chr19 45976504 45976504 1 + T C rs28381252 45976504 + 45976484 45976524 41 AGGCCGGAGAGCTGGTGACTTTGGGGACAGGGGGTGGGAAG AGGCCGGAGAGCTGGTGACTCTGGGGACAGGGGGTGGGAAG Direct Gain 0 0.952112452925303 0 0.944583296775818 prediction 0.904224905850606 Functional Gain - FOSB ENSG00000125740 UTR3 Human protein_coding chr19:45976504 chr19:45976504 . . 0 21 hm5C_associated_SNPs_131151 0 0 2 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr19:45976481-45976509
64251 chr17 78210810 78210810 1 + G C rs145160723 78210810 + 78210790 78210830 41 ACCAGCCTTTCATCCTAACAGGGGAGACAGCTGAGGGGCTC ACCAGCCTTTCATCCTAACACGGGAGACAGCTGAGGGGCTC Direct Gain 0 0.952101550933177 0 0.718795537948608 prediction 0.904203101866354 Functional Gain - SLC26A11 ENSG00000181045 CDS Human protein_coding chr17:78210810 chr17:78210810 nonsynonymous SNV 0.137 4 21 hm5C_associated_SNPs_131153 0 0 1 PPIG POSTAR2 ENCODE chr17:78210807-78210884
64251 chr16 72094678 72094678 1 + T C rs594359 72094678 + 72094658 72094698 41 CTGGAGGAGGACACCTGGTATGCGACTGGGATCTTAAGCTT CTGGAGGAGGACACCTGGTACGCGACTGGGATCTTAAGCTT Direct Gain 0 0.9519449748063 0 0.834445118904114 prediction 0.9038899496126 Functional Gain - HP ENSG00000257017 CDS Human protein_coding chr16:72094678 chr16:72094678 synonymous SNV . 0 21 hm5C_associated_SNPs_131159 0 0 5 LARP4 POSTAR2 ENCODE chr16:72094623-72094689
64251 chr5 138678180 138678180 1 + T C rs73255251 138678180 + 138678160 138678200 41 ACTGGCGGGCTCTTGGCGTCTTGGGGGAACGCTGCAACCGT ACTGGCGGGCTCTTGGCGTCCTGGGGGAACGCTGCAACCGT Direct Gain 0 0.951886459710294 0 0.916650891304016 prediction 0.903772919420587 Functional Gain - PAIP2 ENSG00000120727 UTR5 Human protein_coding chr5:138678180 chr5:138678180 . . 0 21 hm5C_associated_SNPs_131164 0 0 5 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr5:138678164-138678190
64251 chr15 63883949 63883949 1 + T C rs149655439 63883949 + 63883929 63883969 41 TGTGACCCTCTGGGATTTACTTGGATCATCACCCGCACTTC TGTGACCCTCTGGGATTTACCTGGATCATCACCCGCACTTC Direct Gain 0 0.951805823822694 0 0.849938929080963 prediction 0.903611647645389 Functional Gain - USP3-AS1 ENSG00000259248 ncRNA_intronic Human antisense chr15:63883949 chr15:63883949 . . 0 21 hm5C_associated_SNPs_131170 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr15:63883922-63883960
64251 chr19 44030385 44030385 1 - C G BLCA 44030385 - 44030365 44030405 41 CCCAGGCTGACTTACACATTGAGGATGGAGACTCCATCCGC CCCAGGCTGACTTACACATTCAGGATGGAGACTCCATCCGC Direct Gain 0 0.951747736731089 0 0.757896542549133 prediction 0.903495473462177 Functional Gain - ETHE1 ENSG00000105755 CDS Human protein_coding chr19:44030385 chr19:44030385 nonsynonymous SNV 0.428 1 21 hm5C_associated_SNPs_131176 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr19:44030378-44030413
64251 chr7 30324595 30324595 1 + G C rs563006739 30324595 + 30324575 30324615 41 GAGGAGGCGGTGCCGAGATCGGGGGCGCCGAGCGCGGCAGC GAGGAGGCGGTGCCGAGATCCGGGGCGCCGAGCGCGGCAGC Direct Gain 0 0.951657167579201 0 0.988725066184998 prediction 0.903314335158403 Functional Gain - LOC105375218 ENSG00000180233 UTR5 Human protein_coding chr7:30324595 chr7:30324595 . . 0 21 hm5C_associated_SNPs_131181 0 0 2 BUD13 POSTAR2 ENCODE chr7:30324548-30324623
64251 chr12 53700879 53700879 1 + G C LUAD 53700879 + 53700859 53700899 41 CACACCCGAGAGGGTGCCTTGAGCATGGCCCGTGCCACCTT CACACCCGAGAGGGTGCCTTCAGCATGGCCCGTGCCACCTT Direct Gain 0 0.951636886828109 0 0.75883674621582 prediction 0.903273773656219 Functional Gain - C12orf10 ENSG00000139637 CDS Human protein_coding chr12:53700879 chr12:53700879 nonsynonymous SNV 0.988 3 21 hm5C_associated_SNPs_131184 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012388 chr12:53700868-53700909
64251 chr12 93969299 93969299 1 + T C rs76627560 93969299 + 93969279 93969319 41 GTCAAAGGTCCAGGCTCCAGTAGGAGAGAAAGAACTCCTCA GTCAAAGGTCCAGGCTCCAGCAGGAGAGAAAGAACTCCTCA Direct Gain 0 0.951571502474413 0 0.842510104179382 prediction 0.903143004948827 Functional Gain - SOCS2 ENSG00000120833 CDS Human protein_coding chr12:93969299 chr12:93969299 unknown . 0 21 hm5C_associated_SNPs_131191 0 0 3 UPF1 POSTAR2 ENCODE chr12:93969296-93969374
64251 chr5 53813653 53813653 1 + G C rs577640042 53813653 + 53813633 53813673 41 AGGGCGCGACCGGCTGGTCCGGGCAGCGTGGGTTTGCCGCC AGGGCGCGACCGGCTGGTCCCGGCAGCGTGGGTTTGCCGCC Direct Gain 0 0.951538770162337 0 0.89306628704071 prediction 0.903077540324675 Functional Gain - SNX18 ENSG00000178996 UTR5 Human protein_coding chr5:53813653 chr5:53813653 . . 0 21 hm5C_associated_SNPs_131194 0 0 2 DDX3X POSTAR2 ENCODE chr5:53813610-53813668
64251 chr16 24166130 24166130 1 + T C rs432998 24166130 + 24166110 24166150 41 AAGCGGGTGTTGGCCCTGCCTGGGAAGCCGCCCTTCCTGAC AAGCGGGTGTTGGCCCTGCCCGGGAAGCCGCCCTTCCTGAC Direct Gain 0 0.951454612640576 0 0.921088576316833 prediction 0.902909225281151 Functional Gain - PRKCB ENSG00000166501 CDS Human protein_coding chr16:24166130 chr16:24166130 synonymous SNV . 0 21 hm5C_associated_SNPs_131203 0 0 7 DDX24 POSTAR2 ENCODE chr16:24166040-24166179
64251 chr12 56522161 56522161 1 - C G ACC 56522161 - 56522141 56522181 41 CTGGTCAGTGGGGTCGGAGGGAGCAGAGGGCTGGTCCATGG CTGGTCAGTGGGGTCGGAGGCAGCAGAGGGCTGGTCCATGG Direct Gain 0 0.951433616156423 0 0.58504444360733 prediction 0.902867232312846 Functional Gain - ESYT1 ENSG00000139641 CDS Human protein_coding chr12:56522161 chr12:56522161 nonsynonymous SNV 0.006 1 21 hm5C_associated_SNPs_131206 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr12:56522153-56522183
64251 chr16 50324449 50324449 1 + G C LUAD 50324449 + 50324429 50324469 41 CCCTCTCTGTGCTGATGTACGTCGAGTGTCTCCTGCGGCGC CCCTCTCTGTGCTGATGTACCTCGAGTGTCTCCTGCGGCGC Direct Gain 0 0.951417557201854 0 0.768563866615295 prediction 0.902835114403708 Functional Gain - ADCY7 ENSG00000121281 CDS Human protein_coding chr16:50324449 chr16:50324449 nonsynonymous SNV 0.004 0 21 hm5C_associated_SNPs_131207 0 0 1 DDX24 POSTAR2 ENCODE chr16:50324443-50324469
64251 chr7 21940708 21940708 1 - A G SKCM 21940708 - 21940688 21940728 41 TCTGTCCACGGGGGTGGCTTTTGCAAAGATGACCGGCATAG TCTGTCCACGGGGGTGGCTTCTGCAAAGATGACCGGCATAG Direct Gain 0 0.951393212990683 0 0.747148275375366 prediction 0.902786425981366 Functional Gain - DNAH11 ENSG00000105877 CDS Human protein_coding chr7:21940708 chr7:21940708 nonsynonymous SNV 0.870 2 21 hm5C_associated_SNPs_131210 0 0 3 MOV10 POSTAR2 GSE37524,GSM921128 chr7:21940687-21940715
64251 chr6 52442282 52442282 1 + G C rs34793449 52442282 + 52442262 52442302 41 CCGGGCAGCCGGATGCTCCCGGGGTTGCGGGCTGTGGCCCC CCGGGCAGCCGGATGCTCCCCGGGTTGCGGGCTGTGGCCCC Direct Gain 0 0.951347179314729 0 0.820701360702515 prediction 0.902694358629459 Functional Gain - TRAM2-AS1 ENSG00000225791 ncRNA_exonic Human lincRNA chr6:52442282 chr6:52442282 . . 0 21 hm5C_associated_SNPs_131215 0 0 2 SSB POSTAR2 GSE95683,GSM2521600 chr6:52442276-52442293
64251 chr14 64906956 64906956 1 + A C COAD 64906956 + 64906936 64906976 41 GGTGGTGGCATCCAGTAAGAAAGGAGAGCCCGTCAGTGCCG GGTGGTGGCATCCAGTAAGACAGGAGAGCCCGTCAGTGCCG Direct Gain 0 0.951343336367118 0 0.704656362533569 prediction 0.902686672734236 Functional Gain - MTHFD1 ENSG00000100714 CDS Human protein_coding chr14:64906956 chr14:64906956 nonsynonymous SNV 0.658 0 21 hm5C_associated_SNPs_131216 0 0 7 BUD13 POSTAR2 ENCODE chr14:64906934-64907055
64251 chr7 30197090 30197090 1 + G C OV 30197090 + 30197070 30197110 41 ATGCAGATGACGATGCGTTTGAAGAGTACAGTGCTGACGTG ATGCAGATGACGATGCGTTTCAAGAGTACAGTGCTGACGTG Direct Gain 0 0.951121660799378 0 0.397308647632599 prediction 0.902243321598757 Functional Gain - MTURN ENSG00000180354 CDS Human protein_coding chr7:30197090 chr7:30197090 nonsynonymous SNV 0.992 2 21 hm5C_associated_SNPs_131230 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350197 chr7:30197082-30197108
64251 chr6 15512463 15512463 1 + G C BLCA 15512463 + 15512443 15512483 41 CCCCGGAGGTGCTGTGCAAAGAGGGGATCAAGGTGCACAGG CCCCGGAGGTGCTGTGCAAACAGGGGATCAAGGTGCACAGG Direct Gain 0 0.95111408984821 0 0.851192474365234 prediction 0.90222817969642 Functional Gain - JARID2 ENSG00000008083 CDS Human protein_coding chr6:15512463 chr6:15512463 nonsynonymous SNV 0.997 1 21 hm5C_associated_SNPs_131231 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr6:15512460-15512480
64251 chr6 26273276 26273276 1 + A C BLCA 26273276 + 26273256 26273296 41 CGGTGACCAAGGCACAGAAGAAGGATGGCAAGAAGCGCAAG CGGTGACCAAGGCACAGAAGCAGGATGGCAAGAAGCGCAAG Direct Gain 0 0.951049206266849 0 0.866030216217041 prediction 0.902098412533698 Functional Gain - HIST1H2BI ENSG00000168242 CDS Human other chr6:26273276 chr6:26273276 nonsynonymous SNV 0.959 1 21 hm5C_associated_SNPs_131232 0 0 1 GRWD1 POSTAR2 ENCODE chr6:26273225-26273310
64251 chr20 57254123 57254123 1 + A C rs147183140 57254123 + 57254103 57254143 41 CTCAGGTTGAGTGGAGGTAGAAGGAGAAACAGACATGTTTA CTCAGGTTGAGTGGAGGTAGCAGGAGAAACAGACATGTTTA Direct Gain 0 0.950957629530111 0 0.942950963973999 prediction 0.901915259060222 Functional Gain - STX16-NPEPL1 ENSG00000124222 UTR3 Human protein_coding chr20:57254123 chr20:57254123 . . 0 21 hm5C_associated_SNPs_131237 0 0 9 ATXN2 POSTAR2 DRA001158,DRS012391 chr20:57254083-57254128
64251 chr2 173832152 173832152 1 + G C CESC 173832152 + 173832132 173832172 41 ATGGGCCCCGACGCCCACATGAGGATGATCCTTCGCAAACC ATGGGCCCCGACGCCCACATCAGGATGATCCTTCGCAAACC Direct Gain 0 0.950793081286388 0 0.894120395183563 prediction 0.901586162572777 Functional Gain - RAPGEF4 ENSG00000091428 CDS Human protein_coding chr2:173832152 chr2:173832152 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131248 0 0 1 PPIG POSTAR2 ENCODE chr2:173832064-173832182
64251 chr1 93649596 93649596 1 + T C UCEC 93649596 + 93649576 93649616 41 CAAGGTCTGAAAAGCTAATTTTGGATGTTCAGCCTAGCCAC CAAGGTCTGAAAAGCTAATTCTGGATGTTCAGCCTAGCCAC Direct Gain 0 0.950781733818099 0 0.888035893440247 prediction 0.901563467636198 Functional Gain - CCDC18 ENSG00000122483 CDS Human protein_coding chr1:93649596 chr1:93649596 synonymous SNV . 0 21 hm5C_associated_SNPs_131252 0 0 2 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:93649595-93649670
64251 chr9 134398946 134398946 1 + T C rs11005 134398946 + 134398926 134398966 41 AGCGAGCCCGGCAGGCGTCCTGGGACAGCTCAGTGTTGGAG AGCGAGCCCGGCAGGCGTCCCGGGACAGCTCAGTGTTGGAG Direct Gain 0 0.950684975411934 0 0.809631824493408 prediction 0.901369950823868 Functional Gain - POMT1 ENSG00000130714 UTR3 Human protein_coding chr9:134398946 chr9:134398946 . . 0 21 hm5C_associated_SNPs_131255 1 0 4 UPF1 POSTAR2 GSE69586,GSM1704214 chr9:134398935-134398956
64251 chr17 57047015 57047015 1 - A G UCEC 57047015 - 57046995 57047035 41 ACAGGGCCTCAGCAGGATCATGGGGGAACATCTCCTGGCGG ACAGGGCCTCAGCAGGATCACGGGGGAACATCTCCTGGCGG Direct Gain 0 0.95067968152642 0 0.932121515274048 prediction 0.901359363052841 Functional Gain - PPM1E ENSG00000175175 CDS Human protein_coding chr17:57047015 chr17:57047015 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_131257 0 0 1 YTHDF1 POSTAR2 GSE83438,GSM2203038 chr17:57046998-57047023
64251 chr9 110046337 110046337 1 + G C rs72736194 110046337 + 110046317 110046357 41 TCTGGTATGGGTGCACAGGTGGGGGAGGGAGACGTAGGCGT TCTGGTATGGGTGCACAGGTCGGGGAGGGAGACGTAGGCGT Direct Gain 0 0.950644636645102 0 0.850311994552612 prediction 0.901289273290205 Functional Gain - RAD23B ENSG00000119318 UTR5 Human protein_coding chr9:110046337 chr9:110046337 . . 0 21 hm5C_associated_SNPs_131262 0 0 3 EFTUD2 POSTAR2 ENCODE chr9:110046337-110046400
64251 chr19 35175728 35175728 1 + T C UCEC 35175728 + 35175708 35175748 41 CCTTACAAATGCATTGAATGTGGGAAGGCCTTTAGCCATGG CCTTACAAATGCATTGAATGCGGGAAGGCCTTTAGCCATGG Direct Gain 0 0.950603823408646 0 0.863298654556274 prediction 0.901207646817292 Functional Gain - ZNF302 ENSG00000089335 CDS Human protein_coding chr19:35175728 chr19:35175728 synonymous SNV . 0 21 hm5C_associated_SNPs_131263 0 0 2 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:35175713-35175740
64251 chrX 129060054 129060054 1 + G C LUSC 129060054 + 129060034 129060074 41 GCTGGGGCGAGTGGGGTGGTGTGGGCCTAAAGCCCAGTGCC GCTGGGGCGAGTGGGGTGGTCTGGGCCTAAAGCCCAGTGCC Direct Gain 0 0.95059512672631 0 0.926063299179077 prediction 0.90119025345262 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129060054 chrX:129060054 nonsynonymous SNV 0.952 0 21 hm5C_associated_SNPs_131264 0 0 1 ZNF622 POSTAR2 ENCODE chrX:129060045-129060081
64251 chr3 39129649 39129649 1 + A C UCEC 39129649 + 39129629 39129669 41 GCAGGAGAACCGAGTGCAGAAGGGAAATGGATATTTTCAAG GCAGGAGAACCGAGTGCAGACGGGAAATGGATATTTTCAAG Direct Gain 0 0.950547488645125 0 0.599987387657166 prediction 0.90109497729025 Functional Gain - WDR48 ENSG00000114742 CDS Human protein_coding chr3:39129649 chr3:39129649 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_131267 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:39129620-39129652
64251 chr15 72767244 72767244 1 + T C rs373373660 72767244 + 72767224 72767264 41 GGCGGCGGCGGCGGTGGTGGTGGCGGGCCGGGGCATGAGCA GGCGGCGGCGGCGGTGGTGGCGGCGGGCCGGGGCATGAGCA Direct Gain 0 0.950530877588072 0 0.961838603019714 prediction 0.901061755176145 Functional Gain - ARIH1 ENSG00000166233 CDS Human protein_coding chr15:72767244 chr15:72767244 synonymous SNV . 0 21 hm5C_associated_SNPs_131269 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr15:72767236-72767265
64251 chr3 152554066 152554066 1 + G C CESC 152554066 + 152554046 152554086 41 TCCCTGGGCCGGCTCAAAAAGAAGAATGCGATCTGTATCAG TCCCTGGGCCGGCTCAAAAACAAGAATGCGATCTGTATCAG Direct Gain 0 0.950412785033223 0 0.785010576248169 prediction 0.900825570066447 Functional Gain - P2RY1 ENSG00000169860 CDS Human protein_coding chr3:152554066 chr3:152554066 nonsynonymous SNV 0.839 2 21 hm5C_associated_SNPs_131276 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr3:152554045-152554069
64251 chr5 141488364 141488364 1 + G C rs3761759 141488364 + 141488344 141488384 41 AGGGGCCGCGTCGGAGCCTCGGCGGCGGCGGCGGTGCTTAC AGGGGCCGCGTCGGAGCCTCCGCGGCGGCGGCGGTGCTTAC Direct Gain 0 0.950345513021479 0 0.913076460361481 prediction 0.900691026042958 Functional Gain - NDFIP1 ENSG00000131507 UTR5 Human protein_coding chr5:141488364 chr5:141488364 . . 0 21 hm5C_associated_SNPs_131280 0 0 4 DDX3X POSTAR2 ENCODE chr5:141488359-141488431
64251 chr4 2471499 2471499 1 + G C rs143635667 2471499 + 2471479 2471519 41 GTACGGGTGCGGGCCTGACCGTGGGGGCGCCGAGGTCGCAG GTACGGGTGCGGGCCTGACCCTGGGGGCGCCGAGGTCGCAG Direct Gain 0 0.950308042411241 0 0.818479478359222 prediction 0.900616084822482 Functional Gain - RNF4 ENSG00000063978 UTR5 Human protein_coding chr4:2471499 chr4:2471499 . . 0 21 hm5C_associated_SNPs_131282 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:2471481-2471510
64251 chr7 64853783 64853783 1 + G C UCEC 64853783 + 64853763 64853803 41 GGAAAAGAGCCCTGGAATCTGAAGAGACATGAGATGGTAGA GGAAAAGAGCCCTGGAATCTCAAGAGACATGAGATGGTAGA Direct Gain 0 0.950289024556562 0 0.918659329414368 prediction 0.900578049113125 Functional Gain - ZNF92 ENSG00000146757 CDS Human protein_coding chr7:64853783 chr7:64853783 synonymous SNV . 0 21 hm5C_associated_SNPs_131283 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr7:64853761-64853827
64251 chr19 30502084 30502084 1 + T C COAD 30502084 + 30502064 30502104 41 CGTAAACGAAAGAACAGCACTGGCAGTGGCCACTCTGCCCA CGTAAACGAAAGAACAGCACCGGCAGTGGCCACTCTGCCCA Direct Gain 0 0.950206525478915 0 0.710090696811676 prediction 0.90041305095783 Functional Gain - URI1 ENSG00000105176 CDS Human protein_coding chr19:30502084 chr19:30502084 synonymous SNV . 0 21 hm5C_associated_SNPs_131291 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350196 chr19:30502066-30502090
64251 chr7 43830888 43830888 1 + T C rs1802846 43830888 + 43830868 43830908 41 ATGGAGTCCAGCAGATTTCTTTGGAGGATGCTCTTTCCAGC ATGGAGTCCAGCAGATTTCTCTGGAGGATGCTCTTTCCAGC Direct Gain 0 0.950196430384263 0 0.879564762115479 prediction 0.900392860768527 Functional Gain - BLVRA ENSG00000106605 CDS Human protein_coding chr7:43830888 chr7:43830888 synonymous SNV . 0 21 hm5C_associated_SNPs_131293 0 0 3 TARDBP POSTAR2 DRA001158,DRS012387 chr7:43830881-43830909
64251 chr16 89289580 89289580 1 + G C BLCA 89289580 + 89289560 89289600 41 TTTAGGACGCGGTGACCTTTGACGACGTGGCTGTGGACTTC TTTAGGACGCGGTGACCTTTCACGACGTGGCTGTGGACTTC Direct Gain 0 0.950162280517711 0 0.414456963539124 prediction 0.900324561035423 Functional Gain - ZNF778 ENSG00000170100 CDS Human protein_coding chr16:89289580 chr16:89289580 nonsynonymous SNV 0.225 2 21 hm5C_associated_SNPs_131297 0 0 1 TARDBP POSTAR2 DRA001158,DRS012386 chr16:89289571-89289595
64251 chr6 37139080 37139080 1 + A C COAD 37139080 + 37139060 37139100 41 ACGGAAAGGGGAGCCCTGCAAGAGGAGCTGGCCCGCAGCTT ACGGAAAGGGGAGCCCTGCACGAGGAGCTGGCCCGCAGCTT Direct Gain 0 0.95009931893079 0 0.838090777397156 prediction 0.900198637861581 Functional Gain - PIM1 ENSG00000137193 CDS Human protein_coding chr6:37139080 chr6:37139080 nonsynonymous SNV 0.892 1 21 hm5C_associated_SNPs_131304 0 0 8 NUDT21 POSTAR2 GSE37401,GSM917661 chr6:37139049-37139087
64251 chr1 201965318 201965318 1 + G C OV 201965318 + 201965298 201965338 41 GCCTGATTGATGCTGCCAAGGAGGAGTACAACGGGGTGATA GCCTGATTGATGCTGCCAAGCAGGAGTACAACGGGGTGATA Direct Gain 0 0.949984551463685 0 0.84266322851181 prediction 0.899969102927369 Functional Gain - RNPEP ENSG00000176393 CDS Human protein_coding chr1:201965318 chr1:201965318 nonsynonymous SNV 0.516 0 21 hm5C_associated_SNPs_131311 0 0 9 CSTF2T POSTAR2 GSE37401,GSM917677 chr1:201965304-201965346
64251 chr14 93276689 93276689 1 + G C SKCM 93276689 + 93276669 93276709 41 CATGAAGCGGATGCCACTCTGAAGAGAGAGCAGGAGAGCTA CATGAAGCGGATGCCACTCTCAAGAGAGAGCAGGAGAGCTA Direct Gain 0 0.949980287581833 0 0.908628940582275 prediction 0.899960575163666 Functional Gain - GOLGA5 ENSG00000066455 CDS Human protein_coding chr14:93276689 chr14:93276689 synonymous SNV . 0 21 hm5C_associated_SNPs_131312 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr14:93276659-93276689
64251 chr10 71392692 71392692 1 + T C rs1052152 71392692 + 71392672 71392712 41 GGCTTTCCGCAGTGGCATCTTGGCAACCATGCTGTGGAGCC GGCTTTCCGCAGTGGCATCTCGGCAACCATGCTGTGGAGCC Direct Gain 0 0.94994698916895 0 0.832156658172607 prediction 0.899893978337899 Functional Gain - C10orf35 ENSG00000171224 CDS Human protein_coding chr10:71392692 chr10:71392692 synonymous SNV . 0 21 hm5C_associated_SNPs_131316 0 1 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr10:71392681-71392702
64251 chr17 48557348 48557348 1 + T C rs2290861 48557348 + 48557328 48557368 41 AGCCCACCTGCCTGCAGACTTGGAAGTCACATTGGAGGCTA AGCCCACCTGCCTGCAGACTCGGAAGTCACATTGGAGGCTA Direct Gain 0 0.949941199856455 0 0.48283189535141 prediction 0.899882399712909 Functional Gain - RSAD1 ENSG00000136444 CDS Human protein_coding chr17:48557348 chr17:48557348 nonsynonymous SNV 0.983 0 21 hm5C_associated_SNPs_131317 0 0 1 NCBP3 POSTAR2 GSE38201,GSM936507 chr17:48557329-48557353
64251 chr6 34212861 34212861 1 + T C UCEC 34212861 + 34212841 34212881 41 CAGGGCTCCCATGGGCTGAGTGGGGAGCAGTTTTCCCCTGG CAGGGCTCCCATGGGCTGAGCGGGGAGCAGTTTTCCCCTGG Direct Gain 0 0.949852562366221 0 0.865368604660034 prediction 0.899705124732442 Functional Gain - HMGA1 ENSG00000137309 CDS Human protein_coding chr6:34212861 chr6:34212861 synonymous SNV . 0 21 hm5C_associated_SNPs_131324 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:34212824-34212887
64251 chr19 17417186 17417186 1 + T C UCEC 17417186 + 17417166 17417206 41 GCCGCAAGTCGCTGAGCCATTGAGGATCGCGACGCAGTCGG GCCGCAAGTCGCTGAGCCATCGAGGATCGCGACGCAGTCGG Direct Gain 0 0.949835580032464 0 0.985602200031281 prediction 0.899671160064927 Functional Gain - MRPL34 ENSG00000130312 CDS Human protein_coding chr19:17417186 chr19:17417186 stoploss 0.908 0 21 hm5C_associated_SNPs_131326 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:17417155-17417187
64251 chr2 110373228 110373228 1 + G C HNSC 110373228 + 110373208 110373248 41 ACCTGAGTCGGAGCATCGCCGAGGAGATCAAGAACCTGGTG ACCTGAGTCGGAGCATCGCCCAGGAGATCAAGAACCTGGTG Direct Gain 0 0.94967228077913 0 0.922668218612671 prediction 0.899344561558261 Functional Gain - SOWAHC ENSG00000198142 CDS Human protein_coding chr2:110373228 chr2:110373228 nonsynonymous SNV 0.843 1 21 hm5C_associated_SNPs_131333 0 0 2 FMR1 POSTAR2 GSE39682,GSM977615 chr2:110373206-110373229
64251 chr20 62494210 62494210 1 - A G rs553699914 62494210 - 62494190 62494230 41 TGCTTCCGAGCCAGGAACAGTGCGAGGCGCCGGCGCCGCCG TGCTTCCGAGCCAGGAACAGCGCGAGGCGCCGGCGCCGCCG Direct Gain 0 0.949670064221265 0 0.849091529846191 prediction 0.89934012844253 Functional Gain - ABHD16B ENSG00000183260 CDS Human protein_coding chr20:62494210 chr20:62494210 synonymous SNV . 0 21 hm5C_associated_SNPs_131334 0 0 3 SLTM POSTAR2 ENCODE chr20:62494186-62494215
64251 chr8 19253041 19253041 1 + T C rs144784881 19253041 + 19253021 19253061 41 ATAGTCAAGATGAGGTCACATTGGATTAGGGTGGGCCCCAA ATAGTCAAGATGAGGTCACACTGGATTAGGGTGGGCCCCAA Direct Gain 0 0.949639156028538 0 0.95947265625 prediction 0.899278312057076 Functional Gain - SH2D4A ENSG00000104611 UTR3 Human protein_coding chr8:19253041 chr8:19253041 . . 0 21 hm5C_associated_SNPs_131336 0 0 1 MOV10 POSTAR2 GSE37524,GSM921128 chr8:19253018-19253049
64251 chr10 26998620 26998620 1 + T C STAD 26998620 + 26998600 26998640 41 ATGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCG ATGTCTGAGTACTACTTTGACGGGAAAGGGAAAGCCTTTCG Direct Gain 0 0.949570799526145 0 0.792957544326782 prediction 0.899141599052291 Functional Gain - PDSS1 ENSG00000148459 CDS Human protein_coding chr10:26998620 chr10:26998620 synonymous SNV . 0 21 hm5C_associated_SNPs_131341 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr10:26998609-26998633
64251 chr8 97274282 97274282 1 + T C COAD 97274282 + 97274262 97274302 41 GCGGGCCATGGCGTCCTGCGTGGGGAGCCGGACCCTAAGCA GCGGGCCATGGCGTCCTGCGCGGGGAGCCGGACCCTAAGCA Direct Gain 0 0.949559719842046 0 0.942729592323303 prediction 0.899119439684092 Functional Gain - PTDSS1 ENSG00000156471 CDS Human protein_coding chr8:97274282 chr8:97274282 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_131342 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr8:97274253-97274286
64251 chr7 64498755 64498755 1 + G C rs182969532 64498755 + 64498735 64498775 41 GGCGGCGGCGGCAGGATGGCGACGGCCGTCCTGCTGAGCGT GGCGGCGGCGGCAGGATGGCCACGGCCGTCCTGCTGAGCGT Direct Gain 0 0.949492699606865 0 0.54209578037262 prediction 0.89898539921373 Functional Gain - CCT6P3 ENSG00000234585;ENSG00000239985 ncRNA_exonic Human other chr7:64498755 chr7:64498755 . . 0 21 hm5C_associated_SNPs_131352 0 0 18 CSTF2T POSTAR2 ENCODE chr7:64498739-64498808
64251 chr1 45226090 45226090 1 + T C STAD 45226090 + 45226070 45226110 41 AATGAGCGAGGCGCGGACACTTCCAGTGCTGACCGGCAGAC AATGAGCGAGGCGCGGACACCTCCAGTGCTGACCGGCAGAC Direct Gain 0 0.949342903729639 0 0.799722969532013 prediction 0.898685807459279 Functional Gain - KIF2C ENSG00000142945 CDS Human protein_coding chr1:45226090 chr1:45226090 synonymous SNV . 0 21 hm5C_associated_SNPs_131361 0 0 7 HNRNPC POSTAR2 GSE56010,GSM1350199 chr1:45226062-45226092
64251 chr19 811216 811216 1 + A C rs71335272 811216 + 811196 811236 41 CGGGGTGTCCTGGGGACCCAAGGGGTGGGGGGGTCACACCA CGGGGTGTCCTGGGGACCCACGGGGTGGGGGGGTCACACCA Direct Gain 0 0.949320582337855 0 0.953362584114075 prediction 0.89864116467571 Functional Gain - PTBP1 ENSG00000011304 UTR3 Human protein_coding chr19:811216 chr19:811216 . . 0 21 hm5C_associated_SNPs_131363 0 0 5 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:811200-811220
64251 chr11 74680719 74680719 1 + T C LUSC 74680719 + 74680699 74680739 41 GAATGGATCCTGATGATATTTGGCAGCTGTCCTCCAGTCTT GAATGGATCCTGATGATATTCGGCAGCTGTCCTCCAGTCTT Direct Gain 0 0.949272881639378 0 0.92859011888504 prediction 0.898545763278756 Functional Gain - SPCS2 ENSG00000118363 CDS Human protein_coding chr11:74680719 chr11:74680719 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_131368 0 0 7 TARDBP POSTAR2 DRA001158,DRS012386 chr11:74680713-74680745
64251 chr11 59522853 59522853 1 + T C rs565374444 59522853 + 59522833 59522873 41 CGCCGGCCCGGGAGCCGGATTTGGAGCGCGAGGCGCCGGTG CGCCGGCCCGGGAGCCGGATCTGGAGCGCGAGGCGCCGGTG Direct Gain 0 0.949206132178851 0 0.943800389766693 prediction 0.898412264357701 Functional Gain - STX3 ENSG00000166900 UTR5 Human protein_coding chr11:59522853 chr11:59522853 . . 0 21 hm5C_associated_SNPs_131372 0 0 9 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr11:59522840-59522860
64251 chr3 9935070 9935070 1 + T C rs11554811 9935070 + 9935050 9935090 41 AAGCATAAATGAAGCCTCTTTGGGGTGAAGCCTGGACATCC AAGCATAAATGAAGCCTCTTCGGGGTGAAGCCTGGACATCC Direct Gain 0 0.949169624982753 0 0.902137398719788 prediction 0.898339249965505 Functional Gain - JAGN1 ENSG00000171135 UTR3 Human protein_coding chr3:9935070 chr3:9935070 . . 0 21 hm5C_associated_SNPs_131375 0 0 16 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:9935007-9935113
64251 chr21 45540617 45540617 1 + T C HNSC 45540617 + 45540597 45540637 41 GCAGGGGCGCAGGACTCCTTTGAGATTTTCGTGTGGTCCAT GCAGGGGCGCAGGACTCCTTCGAGATTTTCGTGTGGTCCAT Direct Gain 0 0.949134045133931 0 0.900740206241608 prediction 0.898268090267861 Functional Gain - PWP2 ENSG00000241945 CDS Human protein_coding chr21:45540617 chr21:45540617 synonymous SNV . 0 21 hm5C_associated_SNPs_131376 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr21:45540591-45540618
64251 chr4 107246190 107246190 1 + G C rs11544777 107246190 + 107246170 107246210 41 GCAAATAATGATGCTGTTCTGAAGAGACTGGAGCAGAAGGG GCAAATAATGATGCTGTTCTCAAGAGACTGGAGCAGAAGGG Direct Gain 0 0.949105460181064 0 0.837256550788879 prediction 0.898210920362127 Functional Gain - AIMP1 ENSG00000164022 CDS Human protein_coding chr4:107246190 chr4:107246190 synonymous SNV . 0 21 hm5C_associated_SNPs_131379 0 0 24 HNRNPC POSTAR2 GSE56010,GSM1350199 chr4:107246163-107246197
64251 chr15 44846797 44846797 1 + T C UCEC 44846797 + 44846777 44846817 41 GCTAACACCAGAAGAACAATTAGCAGATAAACTGCGGCTAA GCTAACACCAGAAGAACAATCAGCAGATAAACTGCGGCTAA Direct Gain 0 0.948922192739804 0 0.936603486537933 prediction 0.897844385479608 Functional Gain - EIF3J ENSG00000104131 CDS Human protein_coding chr15:44846797 chr15:44846797 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131390 0 0 12 CSTF2 POSTAR2 GSE40859,GSM1003587 chr15:44846780-44846800
64251 chr1 95709967 95709967 1 + T C LUSC 95709967 + 95709947 95709987 41 AGCAAGCAGAGAGCCTTTTGTCGGAGCCTATGGTTCATGAG AGCAAGCAGAGAGCCTTTTGCCGGAGCCTATGGTTCATGAG Direct Gain 0 0.94886974024752 0 0.781146705150604 prediction 0.897739480495041 Functional Gain - RWDD3 ENSG00000122481 CDS Human protein_coding chr1:95709967 chr1:95709967 nonsynonymous SNV 0.040 0 21 hm5C_associated_SNPs_131393 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350197 chr1:95709942-95709975
64251 chr17 40722064 40722064 1 + G C BLCA 40722064 + 40722044 40722084 41 AAGGGGAGGACCAGGTCTCTGACCAGGTCAAGTTCAACGTG AAGGGGAGGACCAGGTCTCTCACCAGGTCAAGTTCAACGTG Direct Gain 0 0.948809215777643 0 0.729728102684021 prediction 0.897618431555285 Functional Gain - MLX ENSG00000108788 CDS Human protein_coding chr17:40722064 chr17:40722064 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131398 0 0 2 ELAVL1 POSTAR2 GSE28865,GSM714639 chr17:40722043-40722071
64251 chr2 135711822 135711822 1 + G C BLCA 135711822 + 135711802 135711842 41 GGAATACCACCCACTGTTCTGAGGAGTCCTGTTGGCCTGAG GGAATACCACCCACTGTTCTCAGGAGTCCTGTTGGCCTGAG Direct Gain 0 0.948690000877196 0 0.971561670303345 prediction 0.897380001754392 Functional Gain - CCNT2 ENSG00000082258 CDS Human protein_coding chr2:135711822 chr2:135711822 synonymous SNV . 0 21 hm5C_associated_SNPs_131406 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350198 chr2:135711811-135711852
64251 chr12 118582585 118582585 1 + T C UCEC 118582585 + 118582565 118582605 41 ATGACTATGTGCCCAAACTGTACGAGCAGCTGTCTGGGAAG ATGACTATGTGCCCAAACTGCACGAGCAGCTGTCTGGGAAG Direct Gain 0 0.94868770968801 0 0.751337885856628 prediction 0.89737541937602 Functional Gain - PEBP1 ENSG00000089220 CDS Human protein_coding chr12:118582585 chr12:118582585 nonsynonymous SNV 0.995 1 21 hm5C_associated_SNPs_131407 0 0 26 ATXN2 POSTAR2 DRA001158,DRS012391 chr12:118582545-118582785
64251 chr9 131133678 131133678 1 + G C LIHC 131133678 + 131133658 131133698 41 ACATGGCTGCGCCCTTGTCAGTGGAGGTGGAGTTCGGGTGA ACATGGCTGCGCCCTTGTCACTGGAGGTGGAGTTCGGGTGA Direct Gain 0 0.948580954171735 0 0.857363998889923 prediction 0.89716190834347 Functional Gain - URM1 ENSG00000167118 CDS Human protein_coding chr9:131133678 chr9:131133678 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_131413 0 0 9 DDX3X POSTAR2 ENCODE chr9:131133634-131133697
64251 chr19 54496175 54496175 1 + G C HNSC 54496175 + 54496155 54496195 41 GCAAGAGGAGAACCGGCGGCGGGGGGCCGCGGGCCGGCGGC GCAAGAGGAGAACCGGCGGCCGGGGGCCGCGGGCCGGCGGC Direct Gain 0 0.948545636703953 0 0.989006161689758 prediction 0.897091273407905 Functional Gain - CACNG6 ENSG00000130433 CDS Human protein_coding chr19:54496175 chr19:54496175 nonsynonymous SNV 0.392 3 21 hm5C_associated_SNPs_131415 0 0 1 LIN28A POSTAR2 GSE44616,GSM1087848 chr19:54496160-54496180
64251 chr14 39649837 39649837 1 + A C COAD 39649837 + 39649817 39649857 41 GAACAGAAGGCGGAACAAGAAGAGGGTAAGGTGGCTCAGCG GAACAGAAGGCGGAACAAGACGAGGGTAAGGTGGCTCAGCG Direct Gain 0 0.948543661478394 0 0.885835587978363 prediction 0.897087322956787 Functional Gain - PNN ENSG00000100941 CDS Human protein_coding chr14:39649837 chr14:39649837 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131416 0 0 27 HNRNPH1 POSTAR2 GSE23694,GSM581052 chr14:39649820-39649840
64251 chr11 199942 199942 1 - A G READ 199942 - 199922 199962 41 AGGGCTTGGTCAGGGTCACCTGGGAGAGGAGGGGCTATGAT AGGGCTTGGTCAGGGTCACCCGGGAGAGGAGGGGCTATGAT Direct Gain 0 0.948511632047432 0 0.959342241287231 prediction 0.897023264094863 Functional Gain - ODF3 ENSG00000177947 splicing Human protein_coding chr11:199942 chr11:199942 . 0.872 0 21 hm5C_associated_SNPs_131417 0 0 2 CSTF2T POSTAR2 ENCODE chr11:199889-199969
64251 chr10 105127790 105127790 1 + T C rs369532931 105127790 + 105127770 105127810 41 GACGGAGGTGGCGGTCAAGCTAGAGCCTGAGGGACCGCCAA GACGGAGGTGGCGGTCAAGCCAGAGCCTGAGGGACCGCCAA Direct Gain 0 0.948459380421071 0 0.917672991752625 prediction 0.896918760842142 Functional Gain - TAF5 ENSG00000148835 CDS Human protein_coding chr10:105127790 chr10:105127790 nonsynonymous SNV 0.998 0 21 hm5C_associated_SNPs_131420 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr10:105127746-105127792
64251 chr19 38818751 38818751 1 + T C rs931750 38818751 + 38818731 38818771 41 GGGCTGAAGTCGGAGAAGCATAGGGACTAGGCCCAATCCAG GGGCTGAAGTCGGAGAAGCACAGGGACTAGGCCCAATCCAG Direct Gain 0 0.948443617406051 0 0.898274540901184 prediction 0.896887234812102 Functional Gain - KCNK6 ENSG00000099337 UTR3 Human protein_coding chr19:38818751 chr19:38818751 . . 0 21 hm5C_associated_SNPs_131421 0 0 1 CELF2 POSTAR2 GSE71264,GSM1831626 chr19:38818740-38818761
64251 chr11 61213920 61213920 1 + T C rs17702 61213920 + 61213900 61213940 41 AGCCAGCTGTGCGTGCTGTATGGAAAGCCTCCCGCCCTCCC AGCCAGCTGTGCGTGCTGTACGGAAAGCCTCCCGCCCTCCC Direct Gain 0 0.948439927491965 0 0.851571500301361 prediction 0.89687985498393 Functional Gain - SDHAF2 ENSG00000167985 UTR3 Human protein_coding chr11:61213920 chr11:61213920 . . 0 21 hm5C_associated_SNPs_131422 1 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:61213891-61213922
64251 chr7 66237049 66237049 1 + T C SKCM 66237049 + 66237029 66237069 41 AGAAGCAGATTCAGGAGGACTGGGAGCTGGCGGAGCGGTAA AGAAGCAGATTCAGGAGGACCGGGAGCTGGCGGAGCGGTAA Direct Gain 0 0.948429766277571 0 0.839395761489868 prediction 0.896859532555143 Functional Gain - RABGEF1 ENSG00000154710;ENSG00000243335 CDS Human other chr7:66237049 chr7:66237049 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_131423 0 0 2 UCHL5 POSTAR2 ENCODE chr7:66237042-66237066
64251 chr8 73921123 73921123 1 + T C LUSC 73921123 + 73921103 73921143 41 CCCAAGCGAGCCATTTAACATGGCGGAGGATGTTTCCTCAG CCCAAGCGAGCCATTTAACACGGCGGAGGATGTTTCCTCAG Direct Gain 0 0.948406091447634 0 0.777480006217957 prediction 0.896812182895268 Functional Gain - TERF1 ENSG00000147601 CDS Human protein_coding chr8:73921123 chr8:73921123 nonsynonymous SNV 0.550 4 21 hm5C_associated_SNPs_131426 0 0 6 DDX3X POSTAR2 GSE70804,GSM1819209 chr8:73921120-73921140
64251 chr18 12325489 12325489 1 + G C STAD 12325489 + 12325469 12325509 41 CCTGGTGTCCGCCACCATGAGTGGGGTCACCACCTCGCTGC CCTGGTGTCCGCCACCATGACTGGGGTCACCACCTCGCTGC Direct Gain 0 0.948366052949039 0 0.573653101921082 prediction 0.896732105898077 Functional Gain - TUBB6 ENSG00000176014 CDS Human protein_coding chr18:12325489 chr18:12325489 nonsynonymous SNV 0.988 2 21 hm5C_associated_SNPs_131431 0 0 1 RPS3 POSTAR2 ENCODE chr18:12325487-12325523
64251 chr3 179041057 179041057 1 + G C rs142375387 179041057 + 179041037 179041077 41 GCCTCTGCGTGGGCCGGCCGGGAGGGCCTCGGGGGACTGAC GCCTCTGCGTGGGCCGGCCGCGAGGGCCTCGGGGGACTGAC Direct Gain 0 0.948146129305055 0 0.905765652656555 prediction 0.896292258610111 Functional Gain - ZNF639 ENSG00000121864 UTR5 Human protein_coding chr3:179041057 chr3:179041057 . . 0 21 hm5C_associated_SNPs_131448 0 0 6 DDX3X POSTAR2 ENCODE chr3:179041038-179041078
64251 chr3 128615300 128615300 1 + G C KIRC 128615300 + 128615280 128615320 41 GGATCATCTTGGCTGGCACTGAGGAGCAGAAAGCCAAATAC GGATCATCTTGGCTGGCACTCAGGAGCAGAAAGCCAAATAC Direct Gain 0 0.948139848491998 0 0.943816661834717 prediction 0.896279696983995 Functional Gain - ACAD9 ENSG00000177646 CDS Human protein_coding chr3:128615300 chr3:128615300 nonsynonymous SNV 0.569 2 21 hm5C_associated_SNPs_131450 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:128615269-128615301
64251 chr12 124104045 124104045 1 + G C LUAD 124104045 + 124104025 124104065 41 GCCCAAGATGCCAGAATTGAGAGGAAAGCAGTTTCCAGATT GCCCAAGATGCCAGAATTGACAGGAAAGCAGTTTCCAGATT Direct Gain 0 0.948126811549187 0 0.574387490749359 prediction 0.896253623098373 Functional Gain - DDX55 ENSG00000111364 CDS Human protein_coding chr12:124104045 chr12:124104045 nonsynonymous SNV 0.991 1 21 hm5C_associated_SNPs_131451 0 0 5 GRWD1 POSTAR2 ENCODE chr12:124103988-124104052
64251 chr16 3117477 3117477 1 + G C rs539684284 3117477 + 3117457 3117497 41 GGGTCTCAGCGTGTGACACTGAGGACACTGTGGGACACCTG GGGTCTCAGCGTGTGACACTCAGGACACTGTGGGACACCTG Direct Gain 0 0.948113220531298 0 0.925330281257629 prediction 0.896226441062596 Functional Gain - IL32 ENSG00000008517 CDS Human protein_coding chr16:3117477 chr16:3117477 nonsynonymous SNV 0.000 1 21 hm5C_associated_SNPs_131454 0 0 13 BUD13 POSTAR2 ENCODE chr16:3117439-3117484
64251 chr3 183368873 183368873 1 + G C BLCA 183368873 + 183368853 183368893 41 GTCTATCGTGCCGTTGATCTGAGAAGACCACTGTTACACGA GTCTATCGTGCCGTTGATCTCAGAAGACCACTGTTACACGA Direct Gain 0 0.948110300180858 0 0.804111003875732 prediction 0.896220600361715 Functional Gain - KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183368873 chr3:183368873 synonymous SNV . 0 21 hm5C_associated_SNPs_131456 0 0 4 FXR1 POSTAR2 ENCODE chr3:183368779-183368906
64251 chrX 100880053 100880053 1 + T C LUSC 100880053 + 100880033 100880073 41 TATTGCATTTATAGACTGACTAGGGGAAGAAAACAGAACAA TATTGCATTTATAGACTGACCAGGGGAAGAAAACAGAACAA Direct Gain 0 0.948093199454788 0 0.818978667259216 prediction 0.896186398909576 Functional Gain - ARMCX3 ENSG00000102401 CDS Human protein_coding chrX:100880053 chrX:100880053 synonymous SNV . 0 21 hm5C_associated_SNPs_131457 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chrX:100880041-100880071
64251 chr1 28087289 28087289 1 + T C rs531655660 28087289 + 28087269 28087309 41 AGACTGCATGCTTGAGTGTTTGGGATTTCAAGCTCGCTCTC AGACTGCATGCTTGAGTGTTCGGGATTTCAAGCTCGCTCTC Direct Gain 0 0.948052517901952 0 0.846511721611023 prediction 0.896105035803904 Functional Gain - FAM76A ENSG00000009780 UTR3 Human protein_coding chr1:28087289 chr1:28087289 . . 0 21 hm5C_associated_SNPs_131458 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr1:28087139-28087300
64251 chr2 37319112 37319112 1 + T C KIRC 37319112 + 37319092 37319132 41 AACGGAAAGCAGAGGAAAAATTGGAAAGCTACAGAAAAAAG AACGGAAAGCAGAGGAAAAACTGGAAAGCTACAGAAAAAAG Direct Gain 0 0.947898461168585 0 0.467208683490753 prediction 0.89579692233717 Functional Gain - GPATCH11 ENSG00000152133 CDS Human protein_coding chr2:37319112 chr2:37319112 synonymous SNV . 0 21 hm5C_associated_SNPs_131463 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:37319089-37319123
64251 chr19 5661656 5661656 1 + A C UCEC 5661656 + 5661636 5661676 41 AGCGGCTGGAGCGGGAGCGCATGGAGCGGGAACGGCTGGAG AGCGGCTGGAGCGGGAGCGCCTGGAGCGGGAACGGCTGGAG Direct Gain 0 0.947861029859674 0 0.905912280082703 prediction 0.895722059719348 Functional Gain - SAFB ENSG00000160633 CDS Human protein_coding chr19:5661656 chr19:5661656 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_131470 0 0 17 DDX3X POSTAR2 GSE70804,GSM1819213 chr19:5661655-5661656
64251 chr4 17625807 17625807 1 + T C rs80313520 17625807 + 17625787 17625827 41 GTAGCCTGAGAATCAGGAGATGGGAGTTTTAGTCGTAGGCC GTAGCCTGAGAATCAGGAGACGGGAGTTTTAGTCGTAGGCC Direct Gain 0 0.947829460004542 0 0.877391695976257 prediction 0.895658920009085 Functional Gain - MED28 ENSG00000118579 UTR3 Human protein_coding chr4:17625807 chr4:17625807 . . 0 21 hm5C_associated_SNPs_131474 0 0 31 TARDBP POSTAR2 DRA001158,DRS012386 chr4:17625658-17625877
64251 chrX 102864134 102864134 1 + A C OV 102864134 + 102864114 102864154 41 AGACAGAATGCGAGGGAAAGAGAGAGGATGAGGGAGAGCCA AGACAGAATGCGAGGGAAAGCGAGAGGATGAGGGAGAGCCA Direct Gain 0 0.947828300344792 0 0.846172213554382 prediction 0.895656600689584 Functional Gain - TCEAL3 ENSG00000196507 CDS Human protein_coding chrX:102864134 chrX:102864134 synonymous SNV . 0 21 hm5C_associated_SNPs_131476 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:102864133-102864155
64251 chr12 48535133 48535133 1 + G C LUSC 48535133 + 48535113 48535153 41 GCTATGTTGGGGGCTGGACTGGCCAAGGTGGCTCTAAACTT GCTATGTTGGGGGCTGGACTCGCCAAGGTGGCTCTAAACTT Direct Gain 0 0.947812945936646 0 0.827290534973145 prediction 0.895625891873292 Functional Gain - PFKM ENSG00000152556 CDS Human protein_coding chr12:48535133 chr12:48535133 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131477 0 0 4 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:48535106-48535133
64251 chr3 43389515 43389515 1 + T C UCEC 43389515 + 43389495 43389535 41 GGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGGTGGACAA GGCCAGAGCAAGCCAAGCAACGCCAGTGGAGGGGTGGACAA Direct Gain 0 0.947791670681123 0 0.716520547866821 prediction 0.895583341362245 Functional Gain - SNRK ENSG00000163788 CDS Human protein_coding chr3:43389515 chr3:43389515 synonymous SNV . 0 21 hm5C_associated_SNPs_131481 0 0 4 YTHDF2 POSTAR2 GSE78030,GSM2064706 chr3:43389500-43389520
64251 chr17 74139352 74139352 1 - C G rs577279119 74139352 - 74139332 74139372 41 GTGGCCAGGACCCCCTTCCTGAGGATCCCTGTCCTTCCTCG GTGGCCAGGACCCCCTTCCTCAGGATCCCTGTCCTTCCTCG Direct Gain 0 0.947679206773115 0 0.95197606086731 prediction 0.89535841354623 Functional Gain - RNF157-AS1 ENSG00000267128 ncRNA_exonic Human antisense chr17:74139352 chr17:74139352 . . 0 21 hm5C_associated_SNPs_131486 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:74139330-74139385
64251 chr3 43732495 43732495 1 + A C rs138400599 43732495 + 43732475 43732515 41 GGCGGCGGCTATGGCGGCGGAGGAGGAGGAGGTGGACTCTG GGCGGCGGCTATGGCGGCGGCGGAGGAGGAGGTGGACTCTG Direct Gain 0 0.947627404175184 0 0.949735045433044 prediction 0.895254808350367 Functional Gain - ABHD5 ENSG00000011198 CDS Human protein_coding chr3:43732495 chr3:43732495 nonsynonymous SNV 0.959 0 21 hm5C_associated_SNPs_131490 0 0 7 EIF3G POSTAR2 GSE65004,GSM1585674 chr3:43732471-43732509
64251 chr4 110737389 110737389 1 + T C rs2276326 110737389 + 110737369 110737409 41 GGTGGCGGCTTCAACCGAGGTGGCAGCAGCAACCACTTCCG GGTGGCGGCTTCAACCGAGGCGGCAGCAGCAACCACTTCCG Direct Gain 0 0.947527992384073 0 0.815348744392395 prediction 0.895055984768147 Functional Gain - GAR1 ENSG00000109534 CDS Human protein_coding chr4:110737389 chr4:110737389 synonymous SNV . 0 21 hm5C_associated_SNPs_131500 0 0 3 DDX3X POSTAR2 ENCODE chr4:110737306-110737398
64251 chr10 77168012 77168012 1 + T C rs145787694 77168012 + 77167992 77168032 41 CCCTCTGGGAGCCGAGATCTTGCGGGGCCAGCGAGGGCGCA CCCTCTGGGAGCCGAGATCTCGCGGGGCCAGCGAGGGCGCA Direct Gain 0 0.947482410815168 0 0.885880351066589 prediction 0.894964821630336 Functional Gain - ZNF503-AS2 ENSG00000237149 ncRNA_exonic Human antisense chr10:77168012 chr10:77168012 . . 0 21 hm5C_associated_SNPs_131506 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr10:77167988-77168026
64251 chr11 66627254 66627254 1 - C G UCEC 66627254 - 66627234 66627274 41 ACAGGGGCGAGGCCGGCAGCGTGGAGAAATGGGCACAGCCC ACAGGGGCGAGGCCGGCAGCCTGGAGAAATGGGCACAGCCC Direct Gain 0 0.947414171022383 0 0.881634831428528 prediction 0.894828342044767 Functional Gain - LRFN4 ENSG00000173621 CDS Human protein_coding chr11:66627254 chr11:66627254 nonsynonymous SNV 0.524 4 21 hm5C_associated_SNPs_131509 0 0 3 CSTF2T POSTAR2 ENCODE chr11:66627226-66627281
64251 chr10 76940403 76940403 1 + T C rs151259296 76940403 + 76940383 76940423 41 GACAGAGAGACCAGAACCCATTGGATCAAGAGACCTGCAGG GACAGAGAGACCAGAACCCACTGGATCAAGAGACCTGCAGG Direct Gain 0 0.947398213916133 0 0.388317137956619 prediction 0.894796427832265 Functional Gain - SAMD8 ENSG00000156671 UTR3 Human protein_coding chr10:76940403 chr10:76940403 . . 0 21 hm5C_associated_SNPs_131512 0 0 12 HNRNPC POSTAR2 GSE56010,GSM1350198 chr10:76940352-76940426
64251 chr17 46940469 46940469 1 + T C rs142936561 46940469 + 46940449 46940489 41 CCTGCCTAACCTGAAATTATTAGGGATTTACTCAGCCCTGC CCTGCCTAACCTGAAATTATCAGGGATTTACTCAGCCCTGC Direct Gain 0 0.947396543965511 0 0.906667351722717 prediction 0.894793087931022 Functional Gain - CALCOCO2 ENSG00000136436 UTR3 Human protein_coding chr17:46940469 chr17:46940469 . . 0 21 hm5C_associated_SNPs_131513 0 0 6 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr17:46940452-46940486
64251 chr19 52817502 52817502 1 + T C SKCM 52817502 + 52817482 52817522 41 CTTTATACAAGGATGTGATGTTGGAGAACTACAGGAACCTG CTTTATACAAGGATGTGATGCTGGAGAACTACAGGAACCTG Direct Gain 0 0.947391889661245 0 0.510191440582275 prediction 0.89478377932249 Functional Gain - ZNF480 ENSG00000198464 CDS Human protein_coding chr19:52817502 chr19:52817502 synonymous SNV . 0 21 hm5C_associated_SNPs_131514 0 0 1 ZNF622 POSTAR2 ENCODE chr19:52817423-52817533
64251 chr19 1469530 1469530 1 - C G rs166452 1469530 - 1469510 1469550 41 GGCGGGACGGGCTCTCGGAGGTGGTGCGCCGGGCAGGGCGC GGCGGGACGGGCTCTCGGAGCTGGTGCGCCGGGCAGGGCGC Direct Gain 0 0.947381580449709 0 0.763798773288727 prediction 0.894763160899418 Functional Gain - APC2 ENSG00000115266 CDS Human protein_coding chr19:1469530 chr19:1469530 nonsynonymous SNV 0.798 0 21 hm5C_associated_SNPs_131515 0 0 7 AGGF1 POSTAR2 ENCODE chr19:1469490-1469534
64251 chr7 99722440 99722440 1 + G C KIRC 99722440 + 99722420 99722460 41 AGGAGGAGGAGGAGGAAGAGGAGGAAGAGGAAGGGGGAGAC AGGAGGAGGAGGAGGAAGAGCAGGAAGAGGAAGGGGGAGAC Direct Gain 0 0.947357283835339 0 0.850435137748718 prediction 0.894714567670678 Functional Gain - CNPY4 ENSG00000166997 CDS Human protein_coding chr7:99722440 chr7:99722440 nonsynonymous SNV 0.090 1 21 hm5C_associated_SNPs_131518 0 0 1 SND1 POSTAR2 ENCODE chr7:99722415-99722509
64251 chr15 44092870 44092870 1 + G C UCEC 44092870 + 44092850 44092890 41 GTTGGAGACTGAGACCAGTGGACCAGAGCGGCCTCCGGAGA GTTGGAGACTGAGACCAGTGCACCAGAGCGGCCTCCGGAGA Direct Gain 0 0.947348856305161 0 0.475661993026733 prediction 0.894697712610322 Functional Gain - HYPK ENSG00000140264;ENSG00000242028 CDS Human other chr15:44092870 chr15:44092870 nonsynonymous SNV 0.994 1 21 hm5C_associated_SNPs_131519 0 0 21 DDX3X POSTAR2 GSE70804,GSM1819209 chr15:44092820-44092880
64251 chr11 9496117 9496117 1 + G C ESCA 9496117 + 9496097 9496137 41 CAGGGGACAGTTTGCGTCTAGAGGATGGTCAAGCAGTACAG CAGGGGACAGTTTGCGTCTACAGGATGGTCAAGCAGTACAG Direct Gain 0 0.947305036837618 0 0.351554065942764 prediction 0.894610073675235 Functional Gain - ZNF143 ENSG00000166478 CDS Human protein_coding chr11:9496117 chr11:9496117 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131523 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr11:9496107-9496132
64251 chr1 46073526 46073526 1 + G C CESC 46073526 + 46073506 46073546 41 ATGTGGGTGGGGACGAGCCAGAGGAGAAGGTAGTTACCTCT ATGTGGGTGGGGACGAGCCACAGGAGAAGGTAGTTACCTCT Direct Gain 0 0.947302978698453 0 0.868260025978088 prediction 0.894605957396907 Functional Gain - NASP ENSG00000132780 CDS Human protein_coding chr1:46073526 chr1:46073526 nonsynonymous SNV 0.912 2 21 hm5C_associated_SNPs_131525 0 0 7 ELAVL1 POSTAR2 GSE28865,GSM714640 chr1:46073492-46073528
64251 chr7 73609926 73609926 1 + T C rs562848775 73609926 + 73609906 73609946 41 CTTGTTTTCCCAGCAGCACATGGGGTTCCTCGGAGGAGCAG CTTGTTTTCCCAGCAGCACACGGGGTTCCTCGGAGGAGCAG Direct Gain 0 0.947290850826528 0 0.795928478240967 prediction 0.894581701653057 Functional Gain - EIF4H ENSG00000106682 UTR3 Human protein_coding chr7:73609926 chr7:73609926 . . 0 21 hm5C_associated_SNPs_131529 0 0 22 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr7:73609902-73609927
64251 chr18 19321668 19321668 1 + T C UCEC 19321668 + 19321648 19321688 41 ATGTGGGCACCGTCCGGAGCTTCGAGAGCCCCGAGGAGGTG ATGTGGGCACCGTCCGGAGCCTCGAGAGCCCCGAGGAGGTG Direct Gain 0 0.947286298950644 0 0.410701483488083 prediction 0.894572597901288 Functional Gain - MIB1 ENSG00000101752 CDS Human protein_coding chr18:19321668 chr18:19321668 nonsynonymous SNV 0.966 0 21 hm5C_associated_SNPs_131530 0 0 10 EIF3H POSTAR2 ENCODE chr18:19321640-19321687
64251 chr22 38471217 38471217 1 + G C rs554201380 38471217 + 38471197 38471237 41 GGGGCGGGGCCGCCGCGCAAGGGGGCGACGCATAAAGGCCT GGGGCGGGGCCGCCGCGCAACGGGGCGACGCATAAAGGCCT Direct Gain 0 0.947200168867449 0 0.745780050754547 prediction 0.894400337734899 Functional Gain - PICK1 ENSG00000100151 UTR3 Human protein_coding chr22:38471217 chr22:38471217 . . 0 21 hm5C_associated_SNPs_131534 0 0 2 CSTF2T POSTAR2 ENCODE chr22:38471168-38471269
64251 chr19 57867702 57867702 1 + G C rs199604217 57867702 + 57867682 57867722 41 GATGGAGGGGCCTCATTTGTGAAGAGCTGTACAGTCCACAT GATGGAGGGGCCTCATTTGTCAAGAGCTGTACAGTCCACAT Direct Gain 0 0.947194995125359 0 0.951381087303162 prediction 0.894389990250718 Functional Gain - ZNF304 ENSG00000131845 CDS Human protein_coding chr19:57867702 chr19:57867702 synonymous SNV . 0 21 hm5C_associated_SNPs_131535 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:57867682-57867705
64251 chr3 50137474 50137474 1 + G C LUAD 50137474 + 50137454 50137494 41 GCGGATGTGAGGCTGATGAAGAGGAAAACAGGTGAGAGCTT GCGGATGTGAGGCTGATGAACAGGAAAACAGGTGAGAGCTT Direct Gain 0 0.947188053521288 0 0.905026614665985 prediction 0.894376107042576 Functional Gain - RBM5 ENSG00000003756 CDS Human protein_coding chr3:50137474 chr3:50137474 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131537 0 0 12 DGCR8 POSTAR2 GSE39086,GSM955510 chr3:50137400-50137480
64251 chr17 41382119 41382119 1 + G C LUAD 41382119 + 41382099 41382139 41 CATCGGCAGAGGTGATAGCTGGGGAGGAGCGGGGATTTGGA CATCGGCAGAGGTGATAGCTCGGGAGGAGCGGGGATTTGGA Direct Gain 0 0.94716053037939 0 0.948885917663574 prediction 0.894321060758779 Functional Gain - LINC00854;LINC00910 ENSG00000236383 ncRNA_intronic Human protein_coding chr17:41382119 chr17:41382119 . . 0 21 hm5C_associated_SNPs_131540 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chr17:41382060-41382140
64251 chr10 75255561 75255561 1 - A G UCEC 75255561 - 75255541 75255581 41 GCTGACCGCGTCGTCAAAGGTGAGAGGTGGACGAAACCCTG GCTGACCGCGTCGTCAAAGGCGAGAGGTGGACGAAACCCTG Direct Gain 0 0.947091563266174 0 0.854875922203064 prediction 0.894183126532347 Functional Gain - PPP3CB-AS1;PPP3CB ENSG00000221817;ENSG00000107758 ncRNA_exonic;splicing Human other chr10:75255561 chr10:75255561 . 1.000 0 21 hm5C_associated_SNPs_131546 0 0 2 PRPF8 POSTAR2 ENCODE chr10:75255513-75255572
64251 chr9 136324153 136324153 1 + T C LIHC 136324153 + 136324133 136324173 41 ATGGGCAGCAGGTGCTCTACTGGGAGTCAGAGAGCAGCCAG ATGGGCAGCAGGTGCTCTACCGGGAGTCAGAGAGCAGCCAG Direct Gain 0 0.946972678842916 0 0.938822627067566 prediction 0.893945357685832 Functional Gain - ADAMTS13 ENSG00000160323 CDS Human protein_coding chr9:136324153 chr9:136324153 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_131559 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:136324135-136324160
64251 chr20 62648154 62648154 1 + G C HNSC 62648154 + 62648134 62648174 41 CCGTGATTGGGATTGGGATTGAGGAGGAAGATCGGAAGCAT CCGTGATTGGGATTGGGATTCAGGAGGAAGATCGGAAGCAT Direct Gain 0 0.94694328876489 0 0.943089723587036 prediction 0.89388657752978 Functional Gain - PRPF6 ENSG00000101161 CDS Human protein_coding chr20:62648154 chr20:62648154 nonsynonymous SNV 0.999 4 21 hm5C_associated_SNPs_131562 0 0 13 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:62648138-62648162
64251 chr17 900427 900427 1 + A C rs143321619 900427 + 900407 900447 41 GGAGGCTCGGCCCCTGAGACAGCGGGTTCCGCCGAAGCTCC GGAGGCTCGGCCCCTGAGACCGCGGGTTCCGCCGAAGCTCC Direct Gain 0 0.946922776547594 0 0.895071268081665 prediction 0.893845553095188 Functional Gain - TIMM22 ENSG00000177370 CDS Human protein_coding chr17:900427 chr17:900427 synonymous SNV . 0 21 hm5C_associated_SNPs_131565 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819209 chr17:900420-900440
64251 chrX 154467737 154467737 1 + T C rs3599 154467737 + 154467717 154467757 41 CTCAGATAAGTGCAGTGTCTTTGCAATGCCAACATAAGGGA CTCAGATAAGTGCAGTGTCTCTGCAATGCCAACATAAGGGA Direct Gain 0 0.94691645684235 0 0.550122380256653 prediction 0.893832913684701 Functional Gain - VBP1 ENSG00000155959 UTR3 Human protein_coding chrX:154467737 chrX:154467737 . . 0 21 hm5C_associated_SNPs_131566 0 0 8 ZC3H7B POSTAR2 GSE38201,GSM936510 chrX:154467647-154467744
64251 chr2 32526479 32526479 1 + T C KIRC 32526479 + 32526459 32526499 41 TGGCCAAGTCCTTGGAGTTATAGGATATTCATTACTTCCTC TGGCCAAGTCCTTGGAGTTACAGGATATTCATTACTTCCTC Direct Gain 0 0.946901904223854 0 0.849129676818848 prediction 0.893803808447708 Functional Gain - YIPF4 ENSG00000119820 CDS Human protein_coding chr2:32526479 chr2:32526479 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131570 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr2:32526457-32526495
64251 chr18 59855215 59855215 1 + G C LUSC 59855215 + 59855195 59855235 41 CCTGGAGCAGCCGGCGTTGGGGGCGCTGGAGGTCGGGAACC CCTGGAGCAGCCGGCGTTGGCGGCGCTGGAGGTCGGGAACC Direct Gain 0 0.946900446640974 0 0.906451523303986 prediction 0.893800893281947 Functional Gain - KIAA1468 ENSG00000134444 CDS Human protein_coding chr18:59855215 chr18:59855215 synonymous SNV . 0 21 hm5C_associated_SNPs_131571 0 0 5 EIF3H POSTAR2 ENCODE chr18:59855147-59855235
64251 chr14 101538432 101538432 1 + T C rs10130558 101538432 + 101538412 101538452 41 CCGGGTGGGGAGGGGGCTGGTTGGGAGAGGAAAGGCTGGAA CCGGGTGGGGAGGGGGCTGGCTGGGAGAGGAAAGGCTGGAA Direct Gain 0 0.946896885135163 0 0.775444269180298 prediction 0.893793770270327 Functional Gain - MEG9 ENSG00000223403 ncRNA_exonic Human lincRNA chr14:101538432 chr14:101538432 . . 0 21 hm5C_associated_SNPs_131573 0 0 1 DGCR8 POSTAR2 ENCODE chr14:101538417-101538470
64251 chr1 100731969 100731969 1 + T C SKCM 100731969 + 100731949 100731989 41 GGAGGTCGATGGCAGCATCATGGAAGGGGTGAGTACAGAGC GGAGGTCGATGGCAGCATCACGGAAGGGGTGAGTACAGAGC Direct Gain 0 0.946840521245048 0 0.493640065193176 prediction 0.893681042490096 Functional Gain - RTCA ENSG00000137996 CDS Human protein_coding chr1:100731969 chr1:100731969 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131576 0 0 8 ALKBH5 POSTAR2 GSE38201,GSM936506 chr1:100731943-100731970
64251 chr14 102679026 102679026 1 + T C rs546528204 102679026 + 102679006 102679046 41 CCGCAGACCTGGGGAGGGCCTGGGGAGGGGTGGCCGCGGTG CCGCAGACCTGGGGAGGGCCCGGGGAGGGGTGGCCGCGGTG Direct Gain 0 0.946818981791467 0 0.942925453186035 prediction 0.893637963582935 Functional Gain - WDR20 ENSG00000140153 UTR3 Human protein_coding chr14:102679026 chr14:102679026 . . 0 21 hm5C_associated_SNPs_131578 0 0 1 XRN2 POSTAR2 ENCODE chr14:102679017-102679063
64251 chr9 137024945 137024945 1 + G C rs564985619 137024945 + 137024925 137024965 41 GGCCCCTTCAGTCTTGTTCTGGGGGGACGGCCCACTCCGGG GGCCCCTTCAGTCTTGTTCTCGGGGGACGGCCCACTCCGGG Direct Gain 0 0.946757354815633 0 0.9944748878479 prediction 0.893514709631266 Functional Gain - WDR5 ENSG00000196363 UTR3 Human protein_coding chr9:137024945 chr9:137024945 . . 0 21 hm5C_associated_SNPs_131579 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012388 chr9:137024923-137024948
64251 chr2 113343947 113343947 1 + G C LUSC 113343947 + 113343927 113343967 41 ACCTGCAACTGTGGAGGTAAGAGGGGCTCACCTCAGTTCAT ACCTGCAACTGTGGAGGTAACAGGGGCTCACCTCAGTTCAT Direct Gain 0 0.946733380338054 0 0.858429789543152 prediction 0.893466760676108 Functional Gain - CHCHD5 ENSG00000125611 CDS Human protein_coding chr2:113343947 chr2:113343947 nonsynonymous SNV 0.072 1 21 hm5C_associated_SNPs_131580 0 0 2 PRPF8 POSTAR2 ENCODE chr2:113343925-113343978
64251 chr1 149858656 149858656 1 + G C CESC 149858656 + 149858636 149858676 41 GGCAACTACGCGGAGCGGGTGGGGGCCGGCGCGCCCGTCTA GGCAACTACGCGGAGCGGGTCGGGGCCGGCGCGCCCGTCTA Direct Gain 0 0.94671432564101 0 0.854624390602112 prediction 0.89342865128202 Functional Gain - HIST2H2AC ENSG00000184260 CDS Human protein_coding chr1:149858656 chr1:149858656 synonymous SNV . 0 21 hm5C_associated_SNPs_131584 0 0 18 FMR1 POSTAR2 GSE39682,GSM977616 chr1:149858637-149858658
64251 chr7 42972035 42972035 1 + G C READ 42972035 + 42972015 42972055 41 TTCGCCGTGGTCTGCGGCCCGGGGAGTGCTTCGAAACTACT TTCGCCGTGGTCTGCGGCCCCGGGAGTGCTTCGAAACTACT Direct Gain 0 0.946641963003064 0 0.794445037841797 prediction 0.893283926006128 Functional Gain - MRPL32 ENSG00000106591 CDS Human protein_coding chr7:42972035 chr7:42972035 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_131589 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012389 chr7:42972013-42972040
64251 chrX 102632529 102632529 1 + G C LUSC 102632529 + 102632509 102632549 41 CCAGCCTGCAGGAAATCGACGGGGACAGGCTCGCCGACTTG CCAGCCTGCAGGAAATCGACCGGGACAGGCTCGCCGACTTG Direct Gain 0 0.946632985959995 0 0.864782929420471 prediction 0.893265971919991 Functional Gain - BEX3 ENSG00000166681 CDS Human protein_coding chrX:102632529 chrX:102632529 nonsynonymous SNV 0.978 1 21 hm5C_associated_SNPs_131590 0 0 12 ATXN2 POSTAR2 DRA001158,DRS012390 chrX:102632496-102632544
64251 chr12 27109540 27109540 1 + T C rs144362881 27109540 + 27109520 27109560 41 GCCACGGTCCACGTTAGTTATGGGAATCCAGCAAGAAAACA GCCACGGTCCACGTTAGTTACGGGAATCCAGCAAGAAAACA Direct Gain 0 0.946629420435236 0 0.488274544477463 prediction 0.893258840870471 Functional Gain - FGFR1OP2 ENSG00000111790 CDS Human protein_coding chr12:27109540 chr12:27109540 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131591 0 0 3 GRWD1 POSTAR2 ENCODE chr12:27109485-27109594
64251 chr1 33150718 33150718 1 + T C rs602580 33150718 + 33150698 33150738 41 GCCTCGGTCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCA GCCTCGGTCTCCCAAAGTGCCGGGATTACAGGTGTGAGCCA Direct Gain 0 0.946590368578252 0 0.738878309726715 prediction 0.893180737156503 Functional Gain - RBBP4 ENSG00000162521 UTR3 Human protein_coding chr1:33150718 chr1:33150718 . . 0 21 hm5C_associated_SNPs_131593 0 0 1 UPF1 POSTAR2 GSE69586,GSM1704214 chr1:33150707-33150728
64251 chr14 105715170 105715170 1 - C G rs186857534 105715170 - 105715150 105715190 41 CGGGGGCAGCCTCGGCGCCTGTGGACGCCGCGCCCCGCGCC CGGGGGCAGCCTCGGCGCCTCTGGACGCCGCGCCCCGCGCC Direct Gain 0 0.946540463053992 0 0.960965633392334 prediction 0.893080926107985 Functional Gain - BTBD6 ENSG00000184887;ENSG00000185024 UTR5 Human other chr14:105715170 chr14:105715170 . . 0 21 hm5C_associated_SNPs_131597 0 0 1 NKRF POSTAR2 ENCODE chr14:105715131-105715183
64251 chr17 73820444 73820444 1 + G C CESC 73820444 + 73820424 73820464 41 CTGTGTGAGCTCTGCGCTGAGGGCAGCGAGTGCCCCATCTG CTGTGTGAGCTCTGCGCTGACGGCAGCGAGTGCCCCATCTG Direct Gain 0 0.946486822406045 0 0.91773533821106 prediction 0.89297364481209 Functional Gain - UNK ENSG00000132478 CDS Human protein_coding chr17:73820444 chr17:73820444 nonsynonymous SNV 0.996 0 21 hm5C_associated_SNPs_131604 0 0 2 CPSF1 POSTAR2 GSE37401,GSM917672 chr17:73820440-73820460
64251 chr5 109025545 109025545 1 + G C rs574054002 109025545 + 109025525 109025565 41 GAAGGGGCTCAGTCGGGGTAGGCGGGGGCGGTGCCGGTGCC GAAGGGGCTCAGTCGGGGTACGCGGGGGCGGTGCCGGTGCC Direct Gain 0 0.946391817765094 0 0.852134048938751 prediction 0.892783635530188 Functional Gain - MAN2A1 ENSG00000112893 UTR5 Human protein_coding chr5:109025545 chr5:109025545 . . 0 21 hm5C_associated_SNPs_131608 0 0 6 RTCB POSTAR2 GSE38201,GSM936508 chr5:109025525-109025549
64251 chr5 79950736 79950736 1 - C G TGCT 79950736 - 79950716 79950756 41 GGCGGGAGCTGGGGGCGCTGGGGGCGCTGCGGCCGCTGCGG GGCGGGAGCTGGGGGCGCTGCGGGCGCTGCGGCCGCTGCGG Direct Gain 0 0.946380274482663 0 0.982776522636414 prediction 0.892760548965325 Functional Gain - MSH3 ENSG00000113318 CDS Human protein_coding chr5:79950736 chr5:79950736 nonsynonymous SNV 0.274 1 21 hm5C_associated_SNPs_131609 0 0 3 DDX3X POSTAR2 ENCODE chr5:79950705-79950750
64251 chr2 182786990 182786990 1 + G C BLCA 182786990 + 182786970 182787010 41 CTCCAGATTTGGAAAGTTCTGAGGAAGTTGATGCAGCTGAA CTCCAGATTTGGAAAGTTCTCAGGAAGTTGATGCAGCTGAA Direct Gain 0 0.946344001204852 0 0.909540891647339 prediction 0.892688002409705 Functional Gain - SSFA2 ENSG00000138434 CDS Human protein_coding chr2:182786990 chr2:182786990 nonsynonymous SNV 0.999 0 21 hm5C_associated_SNPs_131611 0 0 4 TARDBP POSTAR2 DRA001158,DRS012387 chr2:182786937-182786990
64251 chr18 8813046 8813046 1 + A C rs11874468 8813046 + 8813026 8813066 41 AGAGCAAGGGGGCCTTGAAGAAGGAGAGAGAGGTGCACCAG AGAGCAAGGGGGCCTTGAAGCAGGAGAGAGAGGTGCACCAG Direct Gain 0 0.946323872445482 0 0.97746741771698 prediction 0.892647744890964 Functional Gain - MTCL1 ENSG00000168502 CDS Human protein_coding chr18:8813046 chr18:8813046 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_131613 0 0 3 GEMIN5 POSTAR2 ENCODE chr18:8813042-8813083
64251 chr1 160325667 160325667 1 + G C rs116766004 160325667 + 160325647 160325687 41 CCACAGGCCCTGGCAGATGTGGCCACGGTGCTGGGACGTGC CCACAGGCCCTGGCAGATGTCGCCACGGTGCTGGGACGTGC Direct Gain 0 0.946281269523015 0 0.87562894821167 prediction 0.89256253904603 Functional Gain - NCSTN ENSG00000162736 CDS Human protein_coding chr1:160325667 chr1:160325667 synonymous SNV . 0 21 hm5C_associated_SNPs_131615 0 0 8 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:160325667-160325691
64251 chr9 99212486 99212486 1 + A C rs570845103 99212486 + 99212466 99212506 41 GTGGCGGCGGAGCGGGCGGCATGGGTCCTGGCCGCCGGCTT GTGGCGGCGGAGCGGGCGGCCTGGGTCCTGGCCGCCGGCTT Direct Gain 0 0.946236451860899 0 0.866826295852661 prediction 0.892472903721799 Functional Gain - HABP4 ENSG00000130956 UTR5 Human protein_coding chr9:99212486 chr9:99212486 . . 0 21 hm5C_associated_SNPs_131620 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819216 chr9:99212480-99212500
64251 chr10 1061734 1061734 1 + T C HNSC 1061734 + 1061714 1061754 41 AGAAGATCCCGGAGCATCACTAGGAAAAGAAAGCGGGAAGA AGAAGATCCCGGAGCATCACCAGGAAAAGAAAGCGGGAAGA Direct Gain 0 0.946109509321359 0 0.899217903614044 prediction 0.892219018642719 Functional Gain - GTPBP4 ENSG00000107937 CDS Human protein_coding chr10:1061734 chr10:1061734 synonymous SNV . 0 21 hm5C_associated_SNPs_131627 0 0 18 CPSF7 POSTAR2 GSE37401,GSM917663 chr10:1061708-1061744
64251 chr11 130013345 130013345 1 + T C rs534986760 130013345 + 130013325 130013365 41 GGAGCAGATGCAGATTTAGGTGGCAGGGAGCGCGGCAGCCC GGAGCAGATGCAGATTTAGGCGGCAGGGAGCGCGGCAGCCC Direct Gain 0 0.946044833518536 0 0.827941656112671 prediction 0.892089667037072 Functional Gain - APLP2 ENSG00000084234 UTR3 Human protein_coding chr11:130013345 chr11:130013345 . . 0 21 hm5C_associated_SNPs_131633 0 0 28 FIP1L1 POSTAR2 GSE37401,GSM917675 chr11:130013316-130013354
64251 chr14 91642340 91642340 1 + G C rs75931548 91642340 + 91642320 91642360 41 ATGCCATGGTGTGTCCCCCAGGGGAGGTTCCAGTGTTCTGG ATGCCATGGTGTGTCCCCCACGGGAGGTTCCAGTGTTCTGG Direct Gain 0 0.94602724271941 0 0.800633668899536 prediction 0.892054485438819 Functional Gain - C14orf159 ENSG00000133943 CDS Human protein_coding chr14:91642340 chr14:91642340 nonsynonymous SNV 0.266 0 21 hm5C_associated_SNPs_131636 0 0 2 CPSF3 POSTAR2 GSE37401,GSM917669 chr14:91642327-91642352
64251 chrX 16773177 16773177 1 + G C BLCA 16773177 + 16773157 16773197 41 AGCAGGCCGCAGGGAAGGAGGAGAAGAGCAATGGCAGAGAG AGCAGGCCGCAGGGAAGGAGCAGAAGAGCAATGGCAGAGAG Direct Gain 0 0.945947142224573 0 0.533132195472717 prediction 0.891894284449146 Functional Gain - SYAP1 ENSG00000169895 CDS Human protein_coding chrX:16773177 chrX:16773177 nonsynonymous SNV 0.555 0 21 hm5C_associated_SNPs_131643 0 0 1 YTHDF1 POSTAR2 GSE78030,GSM2064705 chrX:16773176-16773177
64251 chr10 54076649 54076649 1 + A C rs74711339 54076649 + 54076629 54076669 41 ACCTTCATCAACTCAATCCTAAGGATATACAAGTTCTGTGG ACCTTCATCAACTCAATCCTCAGGATATACAAGTTCTGTGG Direct Gain 0 0.945858429247482 0 0.922470688819885 prediction 0.891716858494964 Functional Gain - DKK1 ENSG00000107984 UTR3 Human protein_coding chr10:54076649 chr10:54076649 . . 0 21 hm5C_associated_SNPs_131650 0 0 3 RBM47 POSTAR2 GSE58380,GSM1409656 chr10:54076320-54077260
64251 chr3 180685889 180685889 1 + G C CESC 180685889 + 180685869 180685909 41 AAACGGAATCTGAGCGTAAAGACGAGCTGAGTGATTGGTCA AAACGGAATCTGAGCGTAAACACGAGCTGAGTGATTGGTCA Direct Gain 0 0.945838819410042 0 0.477791875600815 prediction 0.891677638820085 Functional Gain - FXR1 ENSG00000114416 CDS Human protein_coding chr3:180685889 chr3:180685889 nonsynonymous SNV 0.996 4 21 hm5C_associated_SNPs_131651 0 0 8 HNRNPC POSTAR2 GSE56010,GSM1350199 chr3:180685846-180685936
64251 chr2 24964987 24964987 1 + T C COAD 24964987 + 24964967 24965007 41 CAGAGGCATGACAGGAAACATAGGAGGACAGTTTGGCACTG CAGAGGCATGACAGGAAACACAGGAGGACAGTTTGGCACTG Direct Gain 0 0.945834339017192 0 0.76566743850708 prediction 0.891668678034383 Functional Gain - NCOA1 ENSG00000084676 CDS Human protein_coding chr2:24964987 chr2:24964987 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131654 0 0 3 CPSF7 POSTAR2 GSE37401,GSM917663 chr2:24964975-24965011
64251 chr7 128846405 128846405 1 + T C LUAD 128846405 + 128846385 128846425 41 AATCGGCCTGGTGCTCATCGTGGGAGGCTACTTCCTCATCC AATCGGCCTGGTGCTCATCGCGGGAGGCTACTTCCTCATCC Direct Gain 0 0.945805595729274 0 0.901997804641724 prediction 0.891611191458548 Functional Gain - SMO ENSG00000128602 CDS Human protein_coding chr7:128846405 chr7:128846405 nonsynonymous SNV 1.000 3 21 hm5C_associated_SNPs_131658 0 0 3 FMR1 POSTAR2 GSE39682,GSM977616 chr7:128846385-128846406
64251 chr11 64950299 64950299 1 + G C CESC 64950299 + 64950279 64950319 41 AGTACCTGGGCCAGGATTATGAGCAGCTGCGGGTGCGATGC AGTACCTGGGCCAGGATTATCAGCAGCTGCGGGTGCGATGC Direct Gain 0 0.945757314259426 0 0.858526289463043 prediction 0.891514628518852 Functional Gain - CAPN1 ENSG00000014216 CDS Human protein_coding chr11:64950299 chr11:64950299 nonsynonymous SNV 0.793 1 21 hm5C_associated_SNPs_131665 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64950277-64950304
64251 chr6 25726482 25726482 1 - C G LUSC 25726482 - 25726462 25726502 41 AGCTAGCGATCCGCAATGATGAGGAACTCAATAAGCTTTTG AGCTAGCGATCCGCAATGATCAGGAACTCAATAAGCTTTTG Direct Gain 0 0.945735895591047 0 0.769786477088928 prediction 0.891471791182093 Functional Gain - HIST1H2AA ENSG00000164508 CDS Human protein_coding chr6:25726482 chr6:25726482 nonsynonymous SNV 0.041 4 21 hm5C_associated_SNPs_131667 0 0 1 SLBP POSTAR2 ENCODE chr6:25726465-25726497
64251 chr20 62906157 62906157 1 + G C rs1060285 62906157 + 62906137 62906177 41 ACCAAGTGGTAGGGCTAAAAGAACAACAGCCTTTTTGGTAG ACCAAGTGGTAGGGCTAAAACAACAACAGCCTTTTTGGTAG Direct Gain 0 0.945656178917263 0 0.827930450439453 prediction 0.891312357834526 Functional Gain - PCMTD2 ENSG00000203880 UTR3 Human protein_coding chr20:62906157 chr20:62906157 . . 0 21 hm5C_associated_SNPs_131675 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350199 chr20:62906129-62906204
64251 chr17 41133041 41133041 1 + G C HNSC 41133041 + 41133021 41133061 41 CCGGCGACCCCGCCAGCGATGAGGGCGATGGGCTGCCAGGG CCGGCGACCCCGCCAGCGATCAGGGCGATGGGCTGCCAGGG Direct Gain 0 0.945624990272052 0 0.966397166252136 prediction 0.891249980544104 Functional Gain - RUNDC1 ENSG00000198863 CDS Human protein_coding chr17:41133041 chr17:41133041 nonsynonymous SNV 0.110 0 21 hm5C_associated_SNPs_131678 0 0 1 PPIG POSTAR2 ENCODE chr17:41133003-41133087
64251 chr11 8118273 8118273 1 + G C LUSC 8118273 + 8118253 8118293 41 TTGACGAGGATGAGGAGGATGAGGAGGAGAATAGCTCCAGC TTGACGAGGATGAGGAGGATCAGGAGGAGAATAGCTCCAGC Direct Gain 0 0.945586081081336 0 0.930285930633545 prediction 0.891172162162672 Functional Gain - TUB ENSG00000166402 CDS Human protein_coding chr11:8118273 chr11:8118273 nonsynonymous SNV 0.992 3 21 hm5C_associated_SNPs_131685 0 0 5 NUDT21 POSTAR2 GSE37401,GSM917661 chr11:8118246-8118280
64251 chr17 29058928 29058928 1 + G C rs536085168 29058928 + 29058908 29058948 41 CGCCTCAGAAGCACGGCGGTGGGGGAGGGGGCGGCTCGGGG CGCCTCAGAAGCACGGCGGTCGGGGAGGGGGCGGCTCGGGG Direct Gain 0 0.945561911333923 0 0.898015737533569 prediction 0.891123822667847 Functional Gain - SUZ12P1 ENSG00000264538 ncRNA_exonic Human transcribed_unprocessed_pseudogene chr17:29058928 chr17:29058928 . . 0 21 hm5C_associated_SNPs_131687 0 0 1 AARS POSTAR2 ENCODE chr17:29058925-29058978
64251 chr19 1468499 1468499 1 - C G LUSC 1468499 - 1468479 1468519 41 TGTCGTCCCTTCCTGTGCTTGGGGGGCTGTAGGGTGGATCC TGTCGTCCCTTCCTGTGCTTCGGGGGCTGTAGGGTGGATCC Direct Gain 0 0.945524859810218 0 0.958900690078735 prediction 0.891049719620436 Functional Gain - APC2 ENSG00000115266 CDS Human protein_coding chr19:1468499 chr19:1468499 synonymous SNV . 0 21 hm5C_associated_SNPs_131689 0 0 15 AKAP8L POSTAR2 ENCODE chr19:1468457-1468505
64251 chr5 52779510 52779510 1 + G C rs11745088 52779510 + 52779490 52779530 41 TCCTAAAGGCAAGATGTAAAGAGCAGCCAGAACTGGAAGTC TCCTAAAGGCAAGATGTAAACAGCAGCCAGAACTGGAAGTC Direct Gain 0 0.945495791224433 0 0.728574872016907 prediction 0.890991582448865 Functional Gain - FST ENSG00000134363 CDS Human protein_coding chr5:52779510 chr5:52779510 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_131692 0 0 2 GRWD1 POSTAR2 ENCODE chr5:52779487-52779540
64251 chr11 47603914 47603914 1 + T C STAD 47603914 + 47603894 47603934 41 TTCCTAGATCTGGGACATGTTTGGAGTCTTCTTTGCTAACC TTCCTAGATCTGGGACATGTCTGGAGTCTTCTTTGCTAACC Direct Gain 0 0.945429945916248 0 0.745696723461151 prediction 0.890859891832495 Functional Gain - NDUFS3 ENSG00000213619 CDS Human protein_coding chr11:47603914 chr11:47603914 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131701 0 0 7 TARDBP POSTAR2 DRA001158,DRS012387 chr11:47603898-47604015
64251 chr1 218458660 218458660 1 + T C LUAD 218458660 + 218458640 218458680 41 ACGCTTCCGGCGCAGAAAAATGGCAGCCGCCGCTCCGGACT ACGCTTCCGGCGCAGAAAAACGGCAGCCGCCGCTCCGGACT Direct Gain 0 0.945394587716745 0 0.777720808982849 prediction 0.89078917543349 Functional Gain - RRP15 ENSG00000067533 CDS Human protein_coding chr1:218458660 chr1:218458660 nonsynonymous SNV 0.053 3 21 hm5C_associated_SNPs_131705 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819210 chr1:218458640-218458660
64251 chr11 66407477 66407477 1 + G C HNSC 66407477 + 66407457 66407497 41 AGGAGCTTCGAGCCAAGTTTGAGGAGTATGGTCCGGTCATC AGGAGCTTCGAGCCAAGTTTCAGGAGTATGGTCCGGTCATC Direct Gain 0 0.945285246870722 0 0.964227318763733 prediction 0.890570493741444 Functional Gain - RBM4 ENSG00000173933 CDS Human protein_coding chr11:66407477 chr11:66407477 nonsynonymous SNV 1.000 0 21 hm5C_associated_SNPs_131714 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr11:66407435-66407490
64251 chrX 129058863 129058863 1 + G C LUAD 129058863 + 129058843 129058883 41 GGAAGCAAAAAGCAAGTTCAGAGGGGACTATTCCCCAGGTC GGAAGCAAAAAGCAAGTTCACAGGGGACTATTCCCCAGGTC Direct Gain 0 0.945204651239605 0 0.845102310180664 prediction 0.890409302479209 Functional Gain - UTP14A ENSG00000156697 CDS Human protein_coding chrX:129058863 chrX:129058863 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_131724 0 0 1 CAPRIN1 POSTAR2 GSE38201,GSM936509 chrX:129058863-129058886
64251 chr17 78389025 78389025 1 + G C CESC 78389025 + 78389005 78389045 41 AGGCGGCGGGAGGGCCGCCGGAGGAAACGCTGTCACTGTGG AGGCGGCGGGAGGGCCGCCGCAGGAAACGCTGTCACTGTGG Direct Gain 0 0.945156584403477 0 0.925487875938416 prediction 0.890313168806955 Functional Gain - ENDOV ENSG00000173818 CDS Human protein_coding chr17:78389025 chr17:78389025 nonsynonymous SNV 0.221 0 21 hm5C_associated_SNPs_131729 0 0 1 CPSF3 POSTAR2 GSE37401,GSM917668 chr17:78389014-78389050
64251 chr12 110353227 110353227 1 + A C BLCA 110353227 + 110353207 110353247 41 GGTTGCAGAGCGCCGGCTGCAGGCATGGGAAGCAGACCAGC GGTTGCAGAGCGCCGGCTGCCGGCATGGGAAGCAGACCAGC Direct Gain 0 0.945146412311782 0 0.880703330039978 prediction 0.890292824623563 Functional Gain - TCHP ENSG00000139437 CDS Human protein_coding chr12:110353227 chr12:110353227 nonsynonymous SNV 0.998 2 21 hm5C_associated_SNPs_131730 0 0 3 BUD13 POSTAR2 ENCODE chr12:110353208-110353327
64251 chr16 87723369 87723369 1 - C G BLCA 87723369 - 87723349 87723389 41 TGTCGTCGGGGGTCAGGTCGGAGGGAGTGGTGCCCTTGCGG TGTCGTCGGGGGTCAGGTCGCAGGGAGTGGTGCCCTTGCGG Direct Gain 0 0.945093652150872 0 0.914016008377075 prediction 0.890187304301743 Functional Gain - JPH3 ENSG00000154118 CDS Human protein_coding chr16:87723369 chr16:87723369 nonsynonymous SNV 0.902 2 21 hm5C_associated_SNPs_131735 0 0 2 EIF3A POSTAR2 GSE65004,GSM1585665 chr16:87723351-87723372
64251 chr1 28562926 28562926 1 + G C STAD 28562926 + 28562906 28562946 41 GGGAAGCCGGTGGGGCCTTCGGAAAGAGAGAGCAGGCTGAA GGGAAGCCGGTGGGGCCTTCCGAAAGAGAGAGCAGGCTGAA Direct Gain 0 0.945031911516433 0 0.777917444705963 prediction 0.890063823032867 Functional Gain - ATPIF1 ENSG00000130770 CDS Human protein_coding chr1:28562926 chr1:28562926 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_131741 0 0 17 TARDBP POSTAR2 DRA001158,DRS012387 chr1:28562881-28562931
64251 chr10 96305680 96305680 1 + T C rs113154675 96305680 + 96305660 96305700 41 CCCGGGTGAGTGTCCAGGCATGCCAGCGGAACGGCCCGCGG CCCGGGTGAGTGTCCAGGCACGCCAGCGGAACGGCCCGCGG Direct Gain 0 0.945004704526039 0 0.48168408870697 prediction 0.890009409052078 Functional Gain - HELLS ENSG00000119969 CDS Human protein_coding chr10:96305680 chr10:96305680 nonsynonymous SNV 0.539 3 21 hm5C_associated_SNPs_131745 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr10:96305643-96305691
64251 chr11 2418430 2418430 1 + T C rs1049549 2418430 + 2418410 2418450 41 AGAGACTCAGCTTGGCCAACTTGGGGGGCTGTGTCCACCCA AGAGACTCAGCTTGGCCAACCTGGGGGGCTGTGTCCACCCA Direct Gain 0 0.944942787281851 0 0.669143199920654 prediction 0.889885574563702 Functional Gain - CD81 ENSG00000110651 UTR3 Human protein_coding chr11:2418430 chr11:2418430 . . 0 21 hm5C_associated_SNPs_131751 0 0 16 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:2418033-2418683
64251 chr19 33864796 33864796 1 + G C rs545000719 33864796 + 33864776 33864816 41 TGGGGGCAGGCGGGCTAGAGGAGCAGGTAAGGAGGCTGCGG TGGGGGCAGGCGGGCTAGAGCAGCAGGTAAGGAGGCTGCGG Direct Gain 0 0.94492967032629 0 0.798227548599243 prediction 0.889859340652581 Functional Gain - CEBPG ENSG00000153879 UTR5 Human protein_coding chr19:33864796 chr19:33864796 . . 0 21 hm5C_associated_SNPs_131752 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012391 chr19:33864749-33864804
64251 chr1 212792760 212792760 1 + A C UCS 212792760 + 212792740 212792780 41 CTCAGATTGAGGAGCTCAAGAACGAGAAGCAGCATTTGATA CTCAGATTGAGGAGCTCAAGCACGAGAAGCAGCATTTGATA Direct Gain 0 0.944925678177673 0 0.520255744457245 prediction 0.889851356355347 Functional Gain - ATF3 ENSG00000162772 CDS Human protein_coding chr1:212792760 chr1:212792760 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_131753 0 0 8 TARDBP POSTAR2 DRA001158,DRS012387 chr1:212792699-212792783
64251 chr21 37721642 37721642 1 + A C UCEC 37721642 + 37721622 37721662 41 GTGTTGGAGTGGTTGGAATTATAGAGTGTAATTTCCTTAAG GTGTTGGAGTGGTTGGAATTCTAGAGTGTAATTTCCTTAAG Direct Gain 0 0.944913957876194 0 0.84119701385498 prediction 0.889827915752389 Functional Gain - MORC3 ENSG00000159256 CDS Human protein_coding chr21:37721642 chr21:37721642 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131754 0 0 3 NUDT21 POSTAR2 GSE37401,GSM917661 chr21:37721608-37721646
64251 chr2 130948170 130948170 1 + G C PRAD 130948170 + 130948150 130948190 41 TGCCCAAGGGGGGCGGGCCTGGGAAGAGCCCTACACGGGGC TGCCCAAGGGGGGCGGGCCTCGGAAGAGCCCTACACGGGGC Direct Gain 0 0.944908942288621 0 0.958315968513489 prediction 0.889817884577243 Functional Gain - MZT2B ENSG00000152082 CDS Human protein_coding chr2:130948170 chr2:130948170 nonsynonymous SNV 0.253 3 21 hm5C_associated_SNPs_131755 0 0 10 LIN28B POSTAR2 GSE46908,GSM1140829 chr2:130948158-130948192
64251 chr2 187351184 187351184 1 + A C COAD 187351184 + 187351164 187351204 41 AAGAAGGAGAAGATTATCGAAGTGAGTACCCACCCCTCCCC AAGAAGGAGAAGATTATCGACGTGAGTACCCACCCCTCCCC Direct Gain 0 0.944849196395151 0 0.618784248828888 prediction 0.889698392790303 Functional Gain - ZC3H15 ENSG00000065548 CDS Human protein_coding chr2:187351184 chr2:187351184 nonsynonymous SNV 0.907 1 21 hm5C_associated_SNPs_131758 0 0 4 PRPF8 POSTAR2 ENCODE chr2:187351144-187351201
64251 chr20 20007466 20007466 1 + T C OV 20007466 + 20007446 20007486 41 GCTCAGTAGCTAGGGAAGAATGGCACGGGCACGTCACAGCT GCTCAGTAGCTAGGGAAGAACGGCACGGGCACGTCACAGCT Direct Gain 0 0.944795453308807 0 0.88043087720871 prediction 0.889590906617614 Functional Gain - NAA20 ENSG00000173418 CDS Human protein_coding chr20:20007466 chr20:20007466 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_131760 0 0 6 ELAVL1 POSTAR2 GSE28865,GSM714639 chr20:20007430-20007484
64251 chr17 8192649 8192649 1 + T C rs138959557 8192649 + 8192629 8192669 41 AGTCTGTTCAGCCTCTCAGTTTGGAGAACCTGGCCCTGAGG AGTCTGTTCAGCCTCTCAGTCTGGAGAACCTGGCCCTGAGG Direct Gain 0 0.944780712044552 0 0.959593296051025 prediction 0.889561424089104 Functional Gain - RANGRF ENSG00000108961 CDS Human protein_coding chr17:8192649 chr17:8192649 synonymous SNV . 0 21 hm5C_associated_SNPs_131762 2 0 5 CPSF6 POSTAR2 GSE37401,GSM917665 chr17:8192624-8192653
64251 chr6 52947370 52947370 1 + T C LUSC 52947370 + 52947350 52947390 41 GTGACTTGGACCTCAGATCATTGGAGCAGTTGTCGCTGGTG GTGACTTGGACCTCAGATCACTGGAGCAGTTGTCGCTGGTG Direct Gain 0 0.944729746673434 0 0.598734557628632 prediction 0.889459493346869 Functional Gain - FBXO9 ENSG00000112146 CDS Human protein_coding chr6:52947370 chr6:52947370 synonymous SNV . 0 21 hm5C_associated_SNPs_131764 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr6:52947317-52947388
64251 chr7 75933445 75933445 1 + T C rs34771861 75933445 + 75933425 75933465 41 TTCGAGTCGCGGGCCCAGCTTGGGGGCCCAGAAGCTGCAAA TTCGAGTCGCGGGCCCAGCTCGGGGGCCCAGAAGCTGCAAA Direct Gain 0 0.944690186383594 0 0.951434850692749 prediction 0.889380372767189 Functional Gain - HSPB1 ENSG00000106211 CDS Human protein_coding chr7:75933445 chr7:75933445 synonymous SNV . 0 21 hm5C_associated_SNPs_131769 2 0 8 PTBP1 POSTAR2 GSE42701,GSM1048186 chr7:75933420-75933480
64251 chr7 905656 905656 1 + T C COAD 905656 + 905636 905676 41 ACGGCGCTGATGAGTCTGTTTGGGATCCCGCTGTGGTACTT ACGGCGCTGATGAGTCTGTTCGGGATCCCGCTGTGGTACTT Direct Gain 0 0.944598005543253 0 0.910581409931183 prediction 0.889196011086505 Functional Gain - SUN1 ENSG00000164828 CDS Human protein_coding chr7:905656 chr7:905656 synonymous SNV . 0 21 hm5C_associated_SNPs_131777 0 0 3 ATXN2 POSTAR2 DRA001158,DRS012391 chr7:905653-905680
64251 chr3 183910898 183910898 1 + G C CESC 183910898 + 183910878 183910918 41 GTCCTTTTCCAGGGCGGCCTGAGGAGGAGTACCGTCACCAG GTCCTTTTCCAGGGCGGCCTCAGGAGGAGTACCGTCACCAG Direct Gain 0 0.944584774230964 0 0.947264909744263 prediction 0.889169548461928 Functional Gain - ABCF3 ENSG00000161204 CDS Human protein_coding chr3:183910898 chr3:183910898 nonsynonymous SNV 0.858 2 21 hm5C_associated_SNPs_131779 0 0 3 EFTUD2 POSTAR2 ENCODE chr3:183910838-183910916
64251 chr12 14927994 14927994 1 + T C rs2195199 14927994 + 14927974 14928014 41 TGTGTAGTCGCGGGGACATGTCGGATGGCCCCAGGGGAGGG TGTGTAGTCGCGGGGACATGCCGGATGGCCCCAGGGGAGGG Direct Gain 0 0.944578655733399 0 0.794401288032532 prediction 0.889157311466798 Functional Gain - H2AFJ ENSG00000246705 UTR3 Human protein_coding chr12:14927994 chr12:14927994 . . 0 21 hm5C_associated_SNPs_131782 0 0 1 RBM22 POSTAR2 ENCODE chr12:14927983-14928072
64251 chr19 45650165 45650165 1 + T C rs375701824 45650165 + 45650145 45650185 41 GCAGGCGTCCTGGGTGGTGGTGGGATGGTCCCCTGTGGCCC GCAGGCGTCCTGGGTGGTGGCGGGATGGTCCCCTGTGGCCC Direct Gain 0 0.94455950650732 0 0.968536555767059 prediction 0.88911901301464 Functional Gain - PPP1R37 ENSG00000104866 UTR3 Human protein_coding chr19:45650165 chr19:45650165 . . 0 21 hm5C_associated_SNPs_131785 0 0 17 YTHDF2 POSTAR2 GSE83438,GSM2203039 chr19:45650145-45650171
64251 chr6 137187785 137187785 1 + T C UCEC 137187785 + 137187765 137187805 41 GTGATCAGACTCTGAGAATATGGGATGTGAAGGCAGCAGGA GTGATCAGACTCTGAGAATACGGGATGTGAAGGCAGCAGGA Direct Gain 0 0.94453994543238 0 0.787153363227844 prediction 0.88907989086476 Functional Gain - PEX7 ENSG00000112357 CDS Human protein_coding chr6:137187785 chr6:137187785 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_131786 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr6:137187767-137187793
64251 chr7 120629789 120629789 1 + G C HNSC 120629789 + 120629769 120629809 41 ACTCTGACCCTCCGAGGGTCGAGGAAGCTCACAGCCGCTGC ACTCTGACCCTCCGAGGGTCCAGGAAGCTCACAGCCGCTGC Direct Gain 0 0.94449224213581 0 0.911698818206787 prediction 0.888984484271619 Functional Gain - CPED1 ENSG00000106034 CDS Human protein_coding chr7:120629789 chr7:120629789 synonymous SNV . 0 21 hm5C_associated_SNPs_131789 0 0 1 RBM15 POSTAR2 ENCODE chr7:120629733-120629826
64251 chr7 63774355 63774355 1 + G C rs566036953 63774355 + 63774335 63774375 41 AGAGGCGGCCTCTTCAATATGGCGGGGCCTTTGTCTCCTAG AGAGGCGGCCTCTTCAATATCGCGGGGCCTTTGTCTCCTAG Direct Gain 0 0.94446792663021 0 0.725692451000214 prediction 0.88893585326042 Functional Gain - ZNF736 ENSG00000234444 UTR5 Human protein_coding chr7:63774355 chr7:63774355 . . 0 21 hm5C_associated_SNPs_131790 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819210 chr7:63774355-63774356
64251 chr1 113243232 113243232 1 + G C rs551453724 113243232 + 113243212 113243252 41 TCCAAGGGACAGGAAGGCTGGGGGAGGGAGTTTACAACCCA TCCAAGGGACAGGAAGGCTGCGGGAGGGAGTTTACAACCCA Direct Gain 0 0.944459324970565 0 0.755423307418823 prediction 0.88891864994113 Functional Gain - MOV10 ENSG00000155363 UTR3 Human protein_coding chr1:113243232 chr1:113243232 . . 0 21 hm5C_associated_SNPs_131791 0 0 2 LARP4 POSTAR2 ENCODE chr1:113243135-113243234
64251 chr22 50957092 50957092 1 + G C LUSC 50957092 + 50957072 50957112 41 TCCCAGACACCGGGAGGACTGAGGAGCAGCCAATGGAAGTT TCCCAGACACCGGGAGGACTCAGGAGCAGCCAATGGAAGTT Direct Gain 0 0.944406017935422 0 0.881131529808044 prediction 0.888812035870845 Functional Gain - NCAPH2 ENSG00000025770 CDS Human protein_coding chr22:50957092 chr22:50957092 nonsynonymous SNV 0.936 2 21 hm5C_associated_SNPs_131794 0 0 11 ATXN2 POSTAR2 DRA001158,DRS012391 chr22:50957075-50957108
64251 chr21 37518591 37518591 1 + G C LUAD 37518591 + 37518571 37518611 41 TTGGGGGTCACGGTCTTATCGAGGATCCTGGCCAGGCGTCT TTGGGGGTCACGGTCTTATCCAGGATCCTGGCCAGGCGTCT Direct Gain 0 0.944378522404034 0 0.955197870731354 prediction 0.888757044808068 Functional Gain - CBR3 ENSG00000159231 CDS Human protein_coding chr21:37518591 chr21:37518591 synonymous SNV . 0 21 hm5C_associated_SNPs_131797 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr21:37518586-37518616
64251 chr11 32615458 32615458 1 + G C HNSC 32615458 + 32615438 32615478 41 AATTGCTCGGAAGTTACACAGAGGACAATGCTTCCCAGGCT AATTGCTCGGAAGTTACACACAGGACAATGCTTCCCAGGCT Direct Gain 0 0.944342764272631 0 0.952548623085022 prediction 0.888685528545261 Functional Gain - EIF3M ENSG00000149100 CDS Human protein_coding chr11:32615458 chr11:32615458 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131802 0 0 28 CPSF6 POSTAR2 GSE37401,GSM917664 chr11:32615421-32615462
64251 chr1 206760474 206760474 1 + T C rs7541244 206760474 + 206760454 206760494 41 TCCATGGACAAGTGTTTGCATGGGGGTTCAGCTGTGCCCGC TCCATGGACAAGTGTTTGCACGGGGGTTCAGCTGTGCCCGC Direct Gain 0 0.944273341314666 0 0.939956724643707 prediction 0.888546682629332 Functional Gain - RASSF5 ENSG00000136653 UTR3 Human other chr1:206760474 chr1:206760474 . . 0 21 hm5C_associated_SNPs_131807 0 0 2 IGF2BP1 POSTAR2 ENCODE chr1:206760427-206760510
64251 chr20 5173008 5173008 1 + G C rs6133193 5173008 + 5172988 5173028 41 GTGGGGGTGGGGTGGGGAAGGGGGGTCTAGGAAGCCGAAGC GTGGGGGTGGGGTGGGGAAGCGGGGTCTAGGAAGCCGAAGC Direct Gain 0 0.94425099342689 0 0.987398147583008 prediction 0.888501986853779 Functional Gain - CDS2 ENSG00000101290 UTR3 Human protein_coding chr20:5173008 chr20:5173008 . . 0 21 hm5C_associated_SNPs_131808 0 0 4 CELF2 POSTAR2 GSE71264,GSM1831618 chr20:5173004-5173025
64251 chr22 30166171 30166171 1 + T C rs535671886 30166171 + 30166151 30166191 41 ATACCTCACTGTCTTGGCCATGGGGAAGCACTATGGCCTCA ATACCTCACTGTCTTGGCCACGGGGAAGCACTATGGCCTCA Direct Gain 0 0.944247991820781 0 0.917699873447418 prediction 0.888495983641561 Functional Gain - UQCR10 ENSG00000184076 UTR3 Human protein_coding chr22:30166171 chr22:30166171 . . 0 21 hm5C_associated_SNPs_131809 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr22:30166142-30166173
64251 chr3 63898589 63898589 1 + T C STAD 63898589 + 63898569 63898609 41 GTTGAGGCTTCCAAACTTCCTGGGAAGGACGGTGAGTGTCC GTTGAGGCTTCCAAACTTCCCGGGAAGGACGGTGAGTGTCC Direct Gain 0 0.944230910667164 0 0.904849171638489 prediction 0.888461821334329 Functional Gain - ATXN7 ENSG00000163635 CDS Human protein_coding chr3:63898589 chr3:63898589 synonymous SNV . 0 21 hm5C_associated_SNPs_131810 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012388 chr3:63898559-63898590
64251 chr12 70637920 70637920 1 + A C rs148962905 70637920 + 70637900 70637940 41 CCGAAGGCTGTGCATGGTGGAGGGAGAAGGAATGCAACTGC CCGAAGGCTGTGCATGGTGGCGGGAGAAGGAATGCAACTGC Direct Gain 0 0.944217417231046 0 0.705579459667206 prediction 0.888434834462093 Functional Gain - CNOT2 ENSG00000111596 UTR5 Human protein_coding chr12:70637920 chr12:70637920 . . 0 21 hm5C_associated_SNPs_131811 0 0 4 ELAVL1 POSTAR2 GSE28865,GSM714640 chr12:70637902-70637923
64251 chr8 86386583 86386583 1 + G C LGG 86386583 + 86386563 86386603 41 TTCACTGGAACACCAAATATGGGGATTTTGGGAAAGCTGTG TTCACTGGAACACCAAATATCGGGATTTTGGGAAAGCTGTG Direct Gain 0 0.944165047365076 0 0.860895276069641 prediction 0.888330094730152 Functional Gain - CA2 ENSG00000104267 CDS Human protein_coding chr8:86386583 chr8:86386583 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_131818 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:86386578-86386629
64251 chr1 227083161 227083161 1 + A C LUAD 227083161 + 227083141 227083181 41 TCCTGCTGCTTGCTGTGTTCAAGAAGGCGCTGCCCGCCCTC TCCTGCTGCTTGCTGTGTTCCAGAAGGCGCTGCCCGCCCTC Direct Gain 0 0.944147928922157 0 0.935306668281555 prediction 0.888295857844314 Functional Gain - PSEN2 ENSG00000143801 CDS Human protein_coding chr1:227083161 chr1:227083161 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131820 0 0 1 DDX3X POSTAR2 GSE70804,GSM1819211 chr1:227083160-227083161
64251 chrX 24089738 24089738 1 + G C LUSC 24089738 + 24089718 24089758 41 AATGGTGGGGCAAGTACTTGGTGCAGTCGGAGCTTTACCTG AATGGTGGGGCAAGTACTTGCTGCAGTCGGAGCTTTACCTG Direct Gain 0 0.944145855827213 0 0.868443965911865 prediction 0.888291711654426 Functional Gain - EIF2S3 ENSG00000130741 CDS Human protein_coding chrX:24089738 chrX:24089738 nonsynonymous SNV 0.995 2 21 hm5C_associated_SNPs_131821 0 0 19 ELAVL1 POSTAR2 GSE28865,GSM714639 chrX:24089700-24089740
64251 chr17 4624378 4624378 1 + G C rs35270783 4624378 + 4624358 4624398 41 GGGATGGGGTTGGGAGAGGTGAGGGCAGGATTAAGATCCCC GGGATGGGGTTGGGAGAGGTCAGGGCAGGATTAAGATCCCC Direct Gain 0 0.944133091930336 0 0.798259973526001 prediction 0.888266183860672 Functional Gain - ARRB2 ENSG00000141480 UTR3 Human protein_coding chr17:4624378 chr17:4624378 . . 0 21 hm5C_associated_SNPs_131822 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr17:4624357-4624382
64251 chr20 42088732 42088732 1 + T C BLCA 42088732 + 42088712 42088752 41 GCCCACAAGGAACGAACAAATGAGGGTGTAATTGAGTTTCG GCCCACAAGGAACGAACAAACGAGGGTGTAATTGAGTTTCG Direct Gain 0 0.944045040416597 0 0.807208955287933 prediction 0.888090080833195 Functional Gain - SRSF6 ENSG00000124193 CDS Human protein_coding chr20:42088732 chr20:42088732 synonymous SNV . 0 21 hm5C_associated_SNPs_131830 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr20:42088712-42088739
64251 chr6 2766144 2766144 1 + T C rs17851692 2766144 + 2766124 2766164 41 GAGAGCAGCGAGGGCGAGGGTGAGGAGGGCGACGACGGCGG GAGAGCAGCGAGGGCGAGGGCGAGGAGGGCGACGACGGCGG Direct Gain 0 0.944030784088763 0 0.878452777862549 prediction 0.888061568177526 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2766144 chr6:2766144 synonymous SNV . 0 21 hm5C_associated_SNPs_131832 0 0 2 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:2766140-2766160
64251 chr19 2273072 2273072 1 + T C LGG 2273072 + 2273052 2273092 41 CTTGCTTCATGGCCTACACGTTCGAGAGAGAGTCTTCGGGA CTTGCTTCATGGCCTACACGCTCGAGAGAGAGTCTTCGGGA Direct Gain 0 0.943907365076646 0 0.867786169052124 prediction 0.887814730153292 Functional Gain - OAZ1 ENSG00000104904 CDS Human protein_coding chr19:2273072 chr19:2273072 nonsynonymous SNV 0.495 0 21 hm5C_associated_SNPs_131838 0 0 52 FIP1L1 POSTAR2 GSE37401,GSM917675 chr19:2272960-2273080
64251 chr16 31202390 31202390 1 + T C COAD 31202390 + 31202370 31202410 41 TTCCGAGGGGGCCGGGGTGGTGGGGACAGAGGTGGCTTTGG TTCCGAGGGGGCCGGGGTGGCGGGGACAGAGGTGGCTTTGG Direct Gain 0 0.943833751566135 0 0.959004640579224 prediction 0.887667503132269 Functional Gain - FUS ENSG00000089280 CDS Human protein_coding chr16:31202390 chr16:31202390 synonymous SNV . 0 21 hm5C_associated_SNPs_131841 0 0 50 NCBP3 POSTAR2 GSE38201,GSM936507 chr16:31202374-31202403
64251 chr3 8607335 8607335 1 + T C SKCM 8607335 + 8607315 8607355 41 GTGCTCCGGCTGCGATGAGGTGGGAGATAGCCGCGAGATGG GTGCTCCGGCTGCGATGAGGCGGGAGATAGCCGCGAGATGG Direct Gain 0 0.943740237632576 0 0.925795376300812 prediction 0.887480475265152 Functional Gain - LMCD1 ENSG00000071282 splicing Human protein_coding chr3:8607335 chr3:8607335 . 0.808 0 21 hm5C_associated_SNPs_131849 0 0 1 DGCR8 POSTAR2 ENCODE chr3:8607331-8607369
64251 chr22 23437454 23437454 1 + T C rs146934131 23437454 + 23437434 23437474 41 GTGAAGGGCTGGATGCACAGTGGGAGCCGGAGGCGGGGGGC GTGAAGGGCTGGATGCACAGCGGGAGCCGGAGGCGGGGGGC Direct Gain 0 0.943710801498913 0 0.936924815177917 prediction 0.887421602997826 Functional Gain - GNAZ ENSG00000128266 UTR5 Human protein_coding chr22:23437454 chr22:23437454 . . 0 21 hm5C_associated_SNPs_131850 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819215 chr22:23437453-23437454
64251 chr9 110087185 110087185 1 + G C CESC 110087185 + 110087165 110087205 41 TCAAGAAGCTGGTGGTCAAGGAGGAGGAGGTGGAGGTGGCA TCAAGAAGCTGGTGGTCAAGCAGGAGGAGGTGGAGGTGGCA Direct Gain 0 0.943705541419269 0 0.841133236885071 prediction 0.887411082838539 Functional Gain - RAD23B ENSG00000119318 CDS Human protein_coding chr9:110087185 chr9:110087185 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_131851 0 0 10 ELAVL1 POSTAR2 GSE28865,GSM714639 chr9:110087155-110087191
64251 chr4 187209769 187209769 1 + A C rs143899287 187209769 + 187209749 187209789 41 AGAAAACTCAAGCAGTGTGAATGGGTTCCCAGGGGCCATTG AGAAAACTCAAGCAGTGTGACTGGGTTCCCAGGGGCCATTG Direct Gain 0 0.94369136666188 0 0.390151381492615 prediction 0.887382733323761 Functional Gain - F11-AS1 ENSG00000251165 ncRNA_exonic Human antisense chr4:187209769 chr4:187209769 . . 0 21 hm5C_associated_SNPs_131853 0 0 1 RPS3 POSTAR2 ENCODE chr4:187209725-187209847
64251 chr13 95364999 95364999 1 + T C rs551643199 95364999 + 95364979 95365019 41 CTCCGGGCAGGGTGCGCCGATGGGAAACCCCCAATCGGCTG CTCCGGGCAGGGTGCGCCGACGGGAAACCCCCAATCGGCTG Direct Gain 0 0.943648016448181 0 0.914886951446533 prediction 0.887296032896362 Functional Gain - SOX21-AS1 ENSG00000227640 ncRNA_exonic Human lincRNA chr13:95364999 chr13:95364999 . . 0 21 hm5C_associated_SNPs_131859 0 0 1 LIN28B POSTAR2 GSE46908,GSM1140829 chr13:95364969-95365000
64251 chr15 43677998 43677998 1 + G C BLCA 43677998 + 43677978 43678018 41 TCCTTGACTAGCGCCTGATTGAGGAAGAGAACATGCTGGCA TCCTTGACTAGCGCCTGATTCAGGAAGAGAACATGCTGGCA Direct Gain 0 0.943640543836724 0 0.924526572227478 prediction 0.887281087673449 Functional Gain - TUBGCP4 ENSG00000137822 CDS Human protein_coding chr15:43677998 chr15:43677998 nonsynonymous SNV 0.996 1 21 hm5C_associated_SNPs_131861 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350199 chr15:43677992-43678026
64251 chr1 41006341 41006341 1 + T C rs74575870 41006341 + 41006321 41006361 41 TGTGCTGAGAGAACCCTGTATTGGGATGTGATGTTGGAGAA TGTGCTGAGAGAACCCTGTACTGGGATGTGATGTTGGAGAA Direct Gain 0 0.943628596107933 0 0.673929274082184 prediction 0.887257192215865 Functional Gain - ZNF684 ENSG00000117010 CDS Human protein_coding chr1:41006341 chr1:41006341 synonymous SNV . 0 21 hm5C_associated_SNPs_131862 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chr1:41006331-41006369
64251 chr3 122121674 122121674 1 + G C BRCA 122121674 + 122121654 122121694 41 CTTACCAGAAGCTCTGATTTGAAGAGAATAAATGGATTTTG CTTACCAGAAGCTCTGATTTCAAGAGAATAAATGGATTTTG Direct Gain 0 0.943618236084136 0 0.740019798278809 prediction 0.887236472168272 Functional Gain - FAM162A ENSG00000114023 CDS Human protein_coding chr3:122121674 chr3:122121674 nonsynonymous SNV 0.907 0 21 hm5C_associated_SNPs_131864 0 0 11 TARDBP POSTAR2 DRA001158,DRS012387 chr3:122121610-122121679
64251 chr16 56485531 56485531 1 + G C KIRC 56485531 + 56485511 56485551 41 TGCCTTGGGAAGAGATGAATGGGAAGCGGCCAGCGGAGCCC TGCCTTGGGAAGAGATGAATCGGAAGCGGCCAGCGGAGCCC Direct Gain 0 0.943616205119052 0 0.961719155311584 prediction 0.887232410238104 Functional Gain - OGFOD1 ENSG00000087263 CDS Human protein_coding chr16:56485531 chr16:56485531 nonsynonymous SNV 0.935 1 21 hm5C_associated_SNPs_131865 0 0 11 DDX3X POSTAR2 GSE70804,GSM1819209 chr16:56485480-56485540
64251 chr6 44221252 44221252 1 + G C HNSC 44221252 + 44221232 44221272 41 ATGAAGATGAAGTGGCAGCAGAGGAACCCAATGCTGCAGTT ATGAAGATGAAGTGGCAGCACAGGAACCCAATGCTGCAGTT Direct Gain 0 0.94359874662711 0 0.550794363021851 prediction 0.887197493254221 Functional Gain - HSP90AB1 ENSG00000096384 CDS Human protein_coding chr6:44221252 chr6:44221252 nonsynonymous SNV 0.987 1 21 hm5C_associated_SNPs_131868 0 0 26 YTHDC1 POSTAR2 GSE78030,GSM2064708 chr6:44221200-44221260
64251 chr15 51296769 51296769 1 + T C rs28456256 51296769 + 51296749 51296789 41 ATACAGAGCTGTCTAATGGGTGGGAGACATGTAATGGTAGA ATACAGAGCTGTCTAATGGGCGGGAGACATGTAATGGTAGA Direct Gain 0 0.943479763987056 0 0.839207768440247 prediction 0.886959527974113 Functional Gain - AP4E1 ENSG00000081014 UTR3 Human protein_coding chr15:51296769 chr15:51296769 . . 0 21 hm5C_associated_SNPs_131877 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr15:51296740-51296774
64251 chr15 41020921 41020921 1 + T C SKCM 41020921 + 41020901 41020941 41 TCTCATAGGTATGGTCTCTCTGGCAGTGATGTCCTGGATAA TCTCATAGGTATGGTCTCTCCGGCAGTGATGTCCTGGATAA Direct Gain 0 0.943464474906032 0 0.847594857215881 prediction 0.886928949812064 Functional Gain - RAD51 ENSG00000051180 CDS Human protein_coding chr15:41020921 chr15:41020921 nonsynonymous SNV . 0 21 hm5C_associated_SNPs_131879 0 0 1 SF3B4 POSTAR2 ENCODE chr15:41020856-41020928
64251 chr19 41829693 41829693 1 - A G rs9282870 41829693 - 41829673 41829713 41 CAGGGCGGCAGGGGGCTCCATGGGGCGGGCCCTGCGGCCAG CAGGGCGGCAGGGGGCTCCACGGGGCGGGCCCTGCGGCCAG Direct Gain 0 0.943453008510462 0 0.92586749792099 prediction 0.886906017020924 Functional Gain - CCDC97 ENSG00000142039 UTR3 Human protein_coding chr19:41829693 chr19:41829693 . . 0 21 hm5C_associated_SNPs_131881 0 0 1 CSTF2T POSTAR2 ENCODE chr19:41829642-41829699
64251 chr1 220267669 220267669 1 + G C rs116823205 220267669 + 220267649 220267689 41 CCGGGATGGCAAGGGGCGACGAAGAGGCTTCTGGTGCGGTC CCGGGATGGCAAGGGGCGACCAAGAGGCTTCTGGTGCGGTC Direct Gain 0 0.943442685841434 0 0.908679187297821 prediction 0.886885371682868 Functional Gain - IARS2 ENSG00000067704 CDS Human protein_coding chr1:220267669 chr1:220267669 synonymous SNV . 0 21 hm5C_associated_SNPs_131882 1 0 17 ATXN2 POSTAR2 DRA001158,DRS012390 chr1:220267617-220267742
64251 chr1 70877186 70877186 1 + G C rs529824425 70877186 + 70877166 70877206 41 TCCATGTGGGCCAGGATCCAGAGCAATGGACCTCCAGGGCT TCCATGTGGGCCAGGATCCACAGCAATGGACCTCCAGGGCT Direct Gain 0 0.943413359097377 0 0.553562641143799 prediction 0.886826718194754 Functional Gain - CTH ENSG00000116761 CDS Human protein_coding chr1:70877186 chr1:70877186 nonsynonymous SNV 0.174 2 21 hm5C_associated_SNPs_131883 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr1:70877158-70877196
64251 chr17 6354162 6354162 1 + T C rs62061024 6354162 + 6354142 6354182 41 CAGGGACTCGGAGGAAGGCATAGGAGATATTTCCAGGCTTA CAGGGACTCGGAGGAAGGCACAGGAGATATTTCCAGGCTTA Direct Gain 0 0.943413161972831 0 0.907273769378662 prediction 0.886826323945662 Functional Gain - PIMREG ENSG00000129195 UTR3 Human protein_coding chr17:6354162 chr17:6354162 . . 0 21 hm5C_associated_SNPs_131884 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012390 chr17:6354162-6354192
64251 chr5 10391786 10391786 1 + G C BLCA 10391786 + 10391766 10391806 41 AAGAGGAGGAGGAGGACAATGAGGAGGAAGATGACGCTGGT AAGAGGAGGAGGAGGACAATCAGGAGGAAGATGACGCTGGT Direct Gain 0 0.943400449166239 0 0.986909568309784 prediction 0.886800898332477 Functional Gain - MARCH6 ENSG00000145495 CDS Human protein_coding chr5:10391786 chr5:10391786 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131886 0 0 31 EIF4A3 POSTAR2 GSE40778,GSM1001330 chr5:10391740-10391800
64251 chr11 94277505 94277505 1 + G C LUSC 94277505 + 94277485 94277525 41 CCCCGCCCGGCACTTGGGAGGAGCAGGGCAGGGCCCGCGGC CCCCGCCCGGCACTTGGGAGCAGCAGGGCAGGGCCCGCGGC Direct Gain 0 0.943295529978848 0 0.668795347213745 prediction 0.886591059957695 Functional Gain - FUT4 ENSG00000196371 CDS Human protein_coding chr11:94277505 chr11:94277505 nonsynonymous SNV 0.322 0 21 hm5C_associated_SNPs_131891 0 0 1 RBM15 POSTAR2 ENCODE chr11:94277484-94277577
64251 chr12 124171441 124171441 1 + G C BLCA 124171441 + 124171421 124171461 41 CTGCTTCACCGGCGTGTTTGGAGGAGACGTCAATCCTCCTT CTGCTTCACCGGCGTGTTTGCAGGAGACGTCAATCCTCCTT Direct Gain 0 0.943243199455102 0 0.913443148136139 prediction 0.886486398910204 Functional Gain - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124171441 chr12:124171441 nonsynonymous SNV 0.751 4 21 hm5C_associated_SNPs_131894 0 0 3 FIP1L1 POSTAR2 GSE37401,GSM917674 chr12:124171421-124171459
64251 chr1 42922362 42922362 1 + A C OV 42922362 + 42922342 42922382 41 CGGGTGGTGTTGGTTACGTCAGGCGGCACCAAGGTCCCACT CGGGTGGTGTTGGTTACGTCCGGCGGCACCAAGGTCCCACT Direct Gain 0 0.9431587372273 0 0.838578581809998 prediction 0.886317474454599 Functional Gain - PPCS ENSG00000127125 CDS Human protein_coding chr1:42922362 chr1:42922362 synonymous SNV . 0 21 hm5C_associated_SNPs_131900 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr1:42922350-42922391
64251 chr2 47601172 47601172 1 + A C LUAD 47601172 + 47601152 47601192 41 CACTGAAATAACCTGCTCTGAGCGAGTGAGAACCTAGTGAG CACTGAAATAACCTGCTCTGCGCGAGTGAGAACCTAGTGAG Direct Gain 0 0.943092024558509 0 0.742414951324463 prediction 0.886184049117019 Functional Gain - EPCAM ENSG00000119888 CDS Human protein_coding chr2:47601172 chr2:47601172 nonsynonymous SNV 0.897 3 21 hm5C_associated_SNPs_131908 0 0 7 LIN28A POSTAR2 GSE39873,GSM980593 chr2:47601160-47601180
64251 chr12 94072813 94072813 1 + A C UCEC 94072813 + 94072793 94072833 41 GGTCAGGGAGAAGCTGAAGAAGGCAAGGGAAGAGGCCATGA GGTCAGGGAGAAGCTGAAGACGGCAAGGGAAGAGGCCATGA Direct Gain 0 0.943003626218794 0 0.475695937871933 prediction 0.886007252437588 Functional Gain - CRADD ENSG00000169372 CDS Human protein_coding chr12:94072813 chr12:94072813 nonsynonymous SNV 0.974 0 21 hm5C_associated_SNPs_131917 0 0 4 GEMIN5 POSTAR2 ENCODE chr12:94072784-94072837
64251 chr2 74687380 74687380 1 + G C HNSC 74687380 + 74687360 74687400 41 CCTTCAAGCCCCCAGCCTACGAGGATGTGGTTCACCGCCCA CCTTCAAGCCCCCAGCCTACCAGGATGTGGTTCACCGCCCA Direct Gain 0 0.942990968323736 0 0.482103794813156 prediction 0.885981936647473 Functional Gain - WBP1 ENSG00000239779 CDS Human protein_coding chr2:74687380 chr2:74687380 nonsynonymous SNV 0.983 3 21 hm5C_associated_SNPs_131919 0 0 4 SRSF1 POSTAR2 GSE83923,GSM2221668 chr2:74687360-74687380
64251 chrX 102612632 102612632 1 + T C rs755806558 102612632 + 102612612 102612652 41 GATGAAATCCTGTCAAAAAATGGAAGGAAAACCAGAAAATG GATGAAATCCTGTCAAAAAACGGAAGGAAAACCAGAAAATG Direct Gain 0 0.9429689068321 0 0.736042618751526 prediction 0.8859378136642 Functional Gain - TCEAL9 ENSG00000185222 CDS Human protein_coding chrX:102612632 chrX:102612632 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_131923 0 0 6 CSTF2 POSTAR2 GSE40859,GSM1003589 chrX:102612616-102612637
64251 chr8 143782019 143782019 1 + A C COAD 143782019 + 143781999 143782039 41 CGCCAACCTGACTGCGAGACAACGAGATCCAGAGGACTCCC CGCCAACCTGACTGCGAGACCACGAGATCCAGAGGACTCCC Direct Gain 0 0.94296474123334 0 0.40545243024826 prediction 0.88592948246668 Functional Gain - LY6K ENSG00000160886 CDS Human protein_coding chr8:143782019 chr8:143782019 nonsynonymous SNV 0.190 1 21 hm5C_associated_SNPs_131924 0 0 3 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr8:143782000-143782020
64251 chrX 48759733 48759733 1 + G C LUAD 48759733 + 48759713 48759753 41 GACAAGGCAGACCGGGAAGAGGGCAAAGAACGGCGCCACCA GACAAGGCAGACCGGGAAGACGGCAAAGAACGGCGCCACCA Direct Gain 0 0.942914930725195 0 0.703946173191071 prediction 0.885829861450391 Functional Gain - PQBP1 ENSG00000102103 CDS Human protein_coding chrX:48759733 chrX:48759733 nonsynonymous SNV 0.997 0 21 hm5C_associated_SNPs_131926 0 0 6 DDX24 POSTAR2 ENCODE chrX:48759698-48759769
64251 chr3 100000628 100000628 1 + T C UCEC 100000628 + 100000608 100000648 41 AAGGTGATAGTTTGGCATCATGGGATGGTATTTTAGACTTG AAGGTGATAGTTTGGCATCACGGGATGGTATTTTAGACTTG Direct Gain 0 0.942911467008941 0 0.757193565368652 prediction 0.885822934017881 Functional Gain - TBC1D23 ENSG00000036054 CDS Human protein_coding chr3:100000628 chr3:100000628 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131927 0 0 5 TARDBP POSTAR2 DRA001158,DRS012386 chr3:100000605-100000631
64251 chr17 47004478 47004478 1 + T C SKCM 47004478 + 47004458 47004498 41 GGGACAGAGACAGACCTTCATGGGAGCCTGAGGGTTTAGAC GGGACAGAGACAGACCTTCACGGGAGCCTGAGGGTTTAGAC Direct Gain 0 0.942777017715607 0 0.72973620891571 prediction 0.885554035431215 Functional Gain - UBE2Z ENSG00000159202 CDS Human protein_coding chr17:47004478 chr17:47004478 synonymous SNV . 0 21 hm5C_associated_SNPs_131940 0 0 11 HNRNPC POSTAR2 GSE56010,GSM1350199 chr17:47004370-47004485
64251 chr19 36257761 36257761 1 + T C COAD 36257761 + 36257741 36257781 41 GGCCAGAGGATGACATTCTGTACCAGTGGCGGCAGCGGCGG GGCCAGAGGATGACATTCTGCACCAGTGGCGGCAGCGGCGG Direct Gain 0 0.942774067365929 0 0.190090209245682 prediction 0.885548134731859 Functional Gain - PROSER3 ENSG00000167595 CDS Human protein_coding chr19:36257761 chr19:36257761 nonsynonymous SNV 0.984 3 21 hm5C_associated_SNPs_131941 0 0 5 HNRNPC POSTAR2 GSE56010,GSM1350197 chr19:36257754-36257791
64251 chrX 134483075 134483075 1 + T C UCEC 134483075 + 134483055 134483095 41 CTTGGAAGAACTGGCACCAGTGGGAACGGCACACATACCAC CTTGGAAGAACTGGCACCAGCGGGAACGGCACACATACCAC Direct Gain 0 0.942736192054847 0 0.951131701469421 prediction 0.885472384109694 Functional Gain - ZNF449 ENSG00000173275 CDS Human protein_coding chrX:134483075 chrX:134483075 nonsynonymous SNV 0.992 0 21 hm5C_associated_SNPs_131944 0 0 2 NUDT21 POSTAR2 GSE37401,GSM917661 chrX:134483046-134483084
64251 chr22 38201558 38201558 1 + G C LUAD 38201558 + 38201538 38201578 41 CCAGACAGGCCACCATGACCGAGAATTCCACGTCCGCCCCT CCAGACAGGCCACCATGACCCAGAATTCCACGTCCGCCCCT Direct Gain 0 0.942701407055541 0 0.518792986869812 prediction 0.885402814111082 Functional Gain - H1F0 ENSG00000189060 CDS Human protein_coding chr22:38201558 chr22:38201558 nonsynonymous SNV 0.988 2 21 hm5C_associated_SNPs_131948 0 0 6 CPSF6 POSTAR2 GSE37401,GSM917664 chr22:38201498-38201558
64251 chr20 2635071 2635071 1 + G C BLCA 2635071 + 2635051 2635091 41 TCCCCTGAGGGGTTGTTCATGAGGACCTCCGCCTGCTCTTG TCCCCTGAGGGGTTGTTCATCAGGACCTCCGCCTGCTCTTG Direct Gain 0 0.942596975013824 0 0.782408356666565 prediction 0.885193950027649 Functional Gain - NOP56 ENSG00000101361 CDS Human protein_coding chr20:2635071 chr20:2635071 nonsynonymous SNV 1.000 1 21 hm5C_associated_SNPs_131959 0 0 29 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:2635048-2635085
64251 chr8 92082536 92082536 1 + T C SARC 92082536 + 92082516 92082556 41 GTAGCCAATGGAGCCCCGGGTGAGGGTTGAGGGGTGGAAGG GTAGCCAATGGAGCCCCGGGCGAGGGTTGAGGGGTGGAAGG Direct Gain 0 0.942551833475206 0 0.741416811943054 prediction 0.885103666950412 Functional Gain - OTUD6B ENSG00000155100 CDS Human protein_coding chr8:92082536 chr8:92082536 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_131961 0 0 1 ATXN2 POSTAR2 DRA001158,DRS012390 chr8:92082517-92082544
64251 chr5 76326698 76326698 1 + T C LUAD 76326698 + 76326678 76326718 41 GGAGAAGTTGGAACGTGAACTGCGGAGCTGCAAGCGGCAGG GGAGAAGTTGGAACGTGAACCGCGGAGCTGCAAGCGGCAGG Direct Gain 0 0.942393740733096 0 0.750417232513428 prediction 0.884787481466192 Functional Gain - AGGF1 ENSG00000164252 CDS Human protein_coding chr5:76326698 chr5:76326698 nonsynonymous SNV 0.993 4 21 hm5C_associated_SNPs_131974 0 0 2 EIF4A3 POSTAR2 GSE40778,GSM1001331 chr5:76326680-76326700
64251 chr19 9271897 9271897 1 + G C LUSC 9271897 + 9271877 9271917 41 CGCACATGCGAAGCCACACGGGGGAGAAACCGTACGAATGC CGCACATGCGAAGCCACACGCGGGAGAAACCGTACGAATGC Direct Gain 0 0.942354117435925 0 0.909289717674255 prediction 0.88470823487185 Functional Gain - ZNF317 ENSG00000130803 CDS Human protein_coding chr19:9271897 chr19:9271897 nonsynonymous SNV 0.791 4 21 hm5C_associated_SNPs_131976 0 0 1 UCHL5 POSTAR2 ENCODE chr19:9271833-9271906
64251 chr7 128138132 128138132 1 + T C UCEC 128138132 + 128138112 128138152 41 CTGAGCAGGCTTCTGAAACCTGGGGGGATGGTACTTCTGCG CTGAGCAGGCTTCTGAAACCCGGGGGGATGGTACTTCTGCG Direct Gain 0 0.94234045543731 0 0.928220748901367 prediction 0.88468091087462 Functional Gain - METTL2B ENSG00000165055 CDS Human protein_coding chr7:128138132 chr7:128138132 synonymous SNV . 0 21 hm5C_associated_SNPs_131977 0 0 7 NCBP3 POSTAR2 GSE38201,GSM936507 chr7:128138127-128138150
64251 chr12 48535153 48535153 1 + T C rs554664722 48535153 + 48535133 48535173 41 GGCCAAGGTGGCTCTAAACTTGGGACTAAAAGGTAAGTAGC GGCCAAGGTGGCTCTAAACTCGGGACTAAAAGGTAAGTAGC Direct Gain 0 0.942314212527739 0 0.94495415687561 prediction 0.884628425055479 Functional Gain - PFKM ENSG00000152556 CDS Human protein_coding chr12:48535153 chr12:48535153 synonymous SNV . 0 21 hm5C_associated_SNPs_131983 1 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr12:48535118-48535159
64251 chr6 13615767 13615767 1 + T C rs75029999 13615767 + 13615747 13615787 41 GAGGAAGGGGACGATGAGTTTGACGATGAGGCCCCGGAGGA GAGGAAGGGGACGATGAGTTCGACGATGAGGCCCCGGAGGA Direct Gain 0 0.942294711396038 0 0.713752329349518 prediction 0.884589422792076 Functional Gain - NOL7 ENSG00000225921 CDS Human protein_coding chr6:13615767 chr6:13615767 synonymous SNV . 0 21 hm5C_associated_SNPs_131984 0 0 18 DDX3X POSTAR2 GSE70804,GSM1819213 chr6:13615740-13615780
64251 chr2 20647414 20647414 1 + A C SKCM 20647414 + 20647394 20647434 41 GCTGTGGGACACGGCGGGCCAGGAGGACTACGACCGCCTGC GCTGTGGGACACGGCGGGCCCGGAGGACTACGACCGCCTGC Direct Gain 0 0.942141866142619 0 0.898310959339142 prediction 0.884283732285237 Functional Gain - RHOB ENSG00000143878 CDS Human protein_coding chr2:20647414 chr2:20647414 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_131997 0 0 9 YTHDF2 POSTAR2 GSE49339,GSM1197605 chr2:20647380-20647440
64251 chr7 106829851 106829851 1 + G C STAD 106829851 + 106829831 106829871 41 TAGAAGATGGTTTACTTACCGTAGAGTGTAAGCTGGACCAC TAGAAGATGGTTTACTTACCCTAGAGTGTAAGCTGGACCAC Direct Gain 0 0.942111524592546 0 0.747449815273285 prediction 0.884223049185091 Functional Gain - HBP1 ENSG00000105856 CDS Human protein_coding chr7:106829851 chr7:106829851 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_132000 0 0 2 RPS3 POSTAR2 ENCODE chr7:106829834-106829885
64251 chr1 63284872 63284872 1 + T C UCEC 63284872 + 63284852 63284892 41 ATGCGAAATGAAGTTTATCATAGGAAAATCATCTCTTGGTT ATGCGAAATGAAGTTTATCACAGGAAAATCATCTCTTGGTT Direct Gain 0 0.942045582357125 0 0.802321195602417 prediction 0.884091164714251 Functional Gain - ATG4C ENSG00000125703 CDS Human protein_coding chr1:63284872 chr1:63284872 synonymous SNV . 0 21 hm5C_associated_SNPs_132005 0 0 3 RBM15B POSTAR2 GSE78030,GSM2064711 chr1:63284871-63284872
64251 chr16 84699709 84699709 1 + G C rs16974380 84699709 + 84699689 84699729 41 GGATAAATGCCTGGAGTATAGGGCAGCGCCACGGGCACTTG GGATAAATGCCTGGAGTATACGGCAGCGCCACGGGCACTTG Direct Gain 0 0.942038721539345 0 0.724885165691376 prediction 0.88407744307869 Functional Gain - KLHL36 ENSG00000135686;ENSG00000103194 intergenic Human other chr16:84699709 chr16:84699709 . . 0 21 hm5C_associated_SNPs_132006 0 0 5 ELAVL1 POSTAR2 GSE28865,GSM714639 chr16:84699705-84699752
64251 chr18 51813729 51813729 1 + T C STAD 51813729 + 51813709 51813749 41 TCTGAGAAGCACTATGGTCGTGAGAGTCGTCAGTGCCCTAT TCTGAGAAGCACTATGGTCGCGAGAGTCGTCAGTGCCCTAT Direct Gain 0 0.942037059231821 0 0.843798041343689 prediction 0.884074118463641 Functional Gain - POLI ENSG00000101751 CDS Human protein_coding chr18:51813729 chr18:51813729 synonymous SNV . 0 21 hm5C_associated_SNPs_132008 0 0 2 TARDBP POSTAR2 DRA001158,DRS012387 chr18:51813722-51813747
64251 chr3 8590359 8590359 1 + G C UCEC 8590359 + 8590339 8590379 41 TGCACCAGCTCCCCATCTATGACCAGGATCCCTCGCGCTGC TGCACCAGCTCCCCATCTATCACCAGGATCCCTCGCGCTGC Direct Gain 0 0.942029770115098 0 0.744919061660767 prediction 0.884059540230196 Functional Gain - LMCD1 ENSG00000071282 CDS Human protein_coding chr3:8590359 chr3:8590359 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_132010 0 0 1 ELAVL1 POSTAR2 GSE28865,GSM714639 chr3:8590357-8590383
64251 chrX 102942348 102942348 1 + G C rs183588287 102942348 + 102942328 102942368 41 CGTGGTGCTGGGGTTGCTGTGTGAGCGGCCCTCGTGGCTCG CGTGGTGCTGGGGTTGCTGTCTGAGCGGCCCTCGTGGCTCG Direct Gain 0 0.941955409621086 0 0.903739929199219 prediction 0.883910819242172 Functional Gain - MORF4L2-AS1 ENSG00000231154 ncRNA_exonic Human antisense chrX:102942348 chrX:102942348 . . 0 21 hm5C_associated_SNPs_132017 0 0 2 TARDBP POSTAR2 DRA001158,DRS012386 chrX:102942322-102942361
64251 chr6 96034700 96034700 1 + G C BLCA 96034700 + 96034680 96034720 41 ATTGGAATCATCCAGTGTTAGAGCATTGGGACCCTAGAATA ATTGGAATCATCCAGTGTTACAGCATTGGGACCCTAGAATA Direct Gain 0 0.941910336714212 0 0.441412806510925 prediction 0.883820673428425 Functional Gain - MANEA ENSG00000172469 CDS Human protein_coding chr6:96034700 chr6:96034700 nonsynonymous SNV 0.975 1 21 hm5C_associated_SNPs_132019 0 0 3 IGF2BP3 POSTAR2 GSE21578,GSM545209 chr6:96034669-96034700
64251 chr11 65088498 65088498 1 + T C rs4149835 65088498 + 65088478 65088518 41 TTCCGCCACACCATTCATATTGGCAGTGGCGGCGGCAGTGA TTCCGCCACACCATTCATATCGGCAGTGGCGGCGGCAGTGA Direct Gain 0 0.941877860302347 0 0.861863434314728 prediction 0.883755720604694 Functional Gain - CDC42EP2 ENSG00000149798 CDS Human protein_coding chr11:65088498 chr11:65088498 synonymous SNV . 0 21 hm5C_associated_SNPs_132021 0 0 3 YTHDF2 POSTAR2 GSE49339,GSM1197607 chr11:65088441-65088498
64251 chr20 37214707 37214707 1 + T C UCEC 37214707 + 37214687 37214727 41 ACTCCAGTGTGTGCTTGGATTGGGAGCCCTGGAGCAAAGGC ACTCCAGTGTGTGCTTGGATCGGGAGCCCTGGAGCAAAGGC Direct Gain 0 0.941868389975085 0 0.926644146442413 prediction 0.88373677995017 Functional Gain - ADIG ENSG00000182035 CDS Human protein_coding chr20:37214707 chr20:37214707 nonsynonymous SNV 0.919 2 21 hm5C_associated_SNPs_132022 0 0 1 ELAVL1 POSTAR2 GSE50989,GSM1234284 chr20:37214704-37214731
64251 chr16 88779738 88779738 1 - C G rs531374262 88779738 - 88779718 88779758 41 TAGCCGTGGGCTCGGGCCATGTGGAGGATCAGGTGGGTCCT TAGCCGTGGGCTCGGGCCATCTGGAGGATCAGGTGGGTCCT Direct Gain 0 0.941778830439666 0 0.95896327495575 prediction 0.883557660879333 Functional Gain - CTU2 ENSG00000174177 CDS Human protein_coding chr16:88779738 chr16:88779738 nonsynonymous SNV 0.040 3 21 hm5C_associated_SNPs_132031 0 0 1 NUDT21 POSTAR2 GSE37401,GSM917661 chr16:88779701-88779739
64251 chr3 183381296 183381296 1 + T C SKCM 183381296 + 183381276 183381316 41 CGTTGGAGGATGTGAGCGAGTTGGAGGATTTAATCTTCCAT CGTTGGAGGATGTGAGCGAGCTGGAGGATTTAATCTTCCAT Direct Gain 0 0.941738974253866 0 0.478646636009216 prediction 0.883477948507731 Functional Gain - KLHL24 ENSG00000114796 CDS Human protein_coding chr3:183381296 chr3:183381296 nonsynonymous SNV 0.998 1 21 hm5C_associated_SNPs_132037 0 0 5 EIF3A POSTAR2 GSE65004,GSM1585665 chr3:183381281-183381302
64251 chr20 49126926 49126926 1 + A C rs377261839 49126926 + 49126906 49126946 41 GGCTGCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGG GGCTGCCGGTTGACATGAAGCAGCAGCAGCGGCTAGGGCGG Direct Gain 0 0.941718527562601 0 0.87334018945694 prediction 0.883437055125201 Functional Gain - PTPN1 ENSG00000196396 UTR5 Human protein_coding chr20:49126926 chr20:49126926 . . 0 21 hm5C_associated_SNPs_132039 0 0 6 DDX3X POSTAR2 ENCODE chr20:49126924-49126999
64251 chr11 62439554 62439554 1 + G C rs55638384 62439554 + 62439534 62439574 41 GGAAGAACTGGATGGTTGGCGGCGAAGGCGGCGCCGGCGGG GGAAGAACTGGATGGTTGGCCGCGAAGGCGGCGCCGGCGGG Direct Gain 0 0.941668003381784 0 0.659370720386505 prediction 0.883336006763568 Functional Gain - UQCC3 ENSG00000204922 CDS Human protein_coding chr11:62439554 chr11:62439554 nonsynonymous SNV 0.111 1 21 hm5C_associated_SNPs_132043 1 0 8 TARDBP POSTAR2 DRA001158,DRS012385 chr11:62439518-62439556
64251 chr17 74554171 74554171 1 + G C rs11870902 74554171 + 74554151 74554191 41 GTCATAGGGCCGGCTTCTGCGGGGGAGAGCGCCTAACAACC GTCATAGGGCCGGCTTCTGCCGGGGAGAGCGCCTAACAACC Direct Gain 0 0.941633872640124 0 0.93420672416687 prediction 0.883267745280248 Functional Gain - SNHG16 ENSG00000163597 ncRNA_exonic Human processed_transcript chr17:74554171 chr17:74554171 . . 0 21 hm5C_associated_SNPs_132048 0 0 3 ELAVL1 POSTAR2 GSE28865,GSM714640 chr17:74554157-74554181
64251 chr11 6411784 6411784 1 + G C rs79282481 6411784 + 6411764 6411804 41 GCTGGCTAGGGTCCAGGCCGGGGGGGACGGGACAGACGAAC GCTGGCTAGGGTCCAGGCCGCGGGGGACGGGACAGACGAAC Direct Gain 0 0.941624855646006 0 0.951911330223083 prediction 0.883249711292013 Functional Gain - SMPD1 ENSG00000166311 UTR5 Human protein_coding chr11:6411784 chr11:6411784 . . 0 21 hm5C_associated_SNPs_132049 1 0 4 DDX3X POSTAR2 GSE70804,GSM1819215 chr11:6411783-6411784
64251 chr16 89949798 89949798 1 + G C LUSC 89949798 + 89949778 89949818 41 AGGATGACCCTGTGGTGAACGGGGAGAGGTCTGGCTGTGCG AGGATGACCCTGTGGTGAACCGGGAGAGGTCTGGCTGTGCG Direct Gain 0 0.941579327626849 0 0.906654953956604 prediction 0.883158655253699 Functional Gain - TCF25 ENSG00000141002 CDS Human protein_coding chr16:89949798 chr16:89949798 nonsynonymous SNV 0.668 2 21 hm5C_associated_SNPs_132051 0 0 16 FIP1L1 POSTAR2 GSE37401,GSM917674 chr16:89949757-89949801
64251 chr8 21863508 21863508 1 + T C rs150810269 21863508 + 21863488 21863528 41 AAGTGAGCCCACTGCTCTCCTGGGAGCAATGTGGGTGAGTC AAGTGAGCCCACTGCTCTCCCGGGAGCAATGTGGGTGAGTC Direct Gain 0 0.941513051018407 0 0.93372654914856 prediction 0.883026102036814 Functional Gain - XPO7 ENSG00000130227 UTR3 Human protein_coding chr8:21863508 chr8:21863508 . . 0 21 hm5C_associated_SNPs_132061 0 0 2 FAM120A POSTAR2 ENCODE chr8:21863438-21863508
64251 chr9 123615481 123615481 1 + T C rs139678289 123615481 + 123615461 123615501 41 GGTGTCAAGGTTGACTGTTATAGGAAATGGGAGGGGAGAGG GGTGTCAAGGTTGACTGTTACAGGAAATGGGAGGGGAGAGG Direct Gain 0 0.941511787790371 0 0.782256960868835 prediction 0.883023575580743 Functional Gain - PSMD5-AS1 ENSG00000226752 ncRNA_exonic Human transcribed_unitary_pseudogene chr9:123615481 chr9:123615481 . . 0 21 hm5C_associated_SNPs_132062 0 0 2 LIN28B POSTAR2 ENCODE chr9:123615451-123615524
64251 chr3 10291095 10291095 1 + T C UCEC 10291095 + 10291075 10291115 41 CTTGCTCGCGGAGGTTATCCTGGGGCTCATCCCGCCGCAGA CTTGCTCGCGGAGGTTATCCCGGGGCTCATCCCGCCGCAGA Direct Gain 0 0.941458010460008 0 0.956287264823914 prediction 0.882916020920016 Functional Gain - TATDN2 ENSG00000157014;ENSG00000272410 CDS Human other chr3:10291095 chr3:10291095 nonsynonymous SNV 0.048 0 21 hm5C_associated_SNPs_132069 0 0 6 ATXN2 POSTAR2 DRA001158,DRS012389 chr3:10291075-10291101
64251 chr11 82868483 82868483 1 + T C LUSC 82868483 + 82868463 82868503 41 GGAGGGGGGCCGCGGCGCAATGTCAGAGCAGACGCCGGCCG GGAGGGGGGCCGCGGCGCAACGTCAGAGCAGACGCCGGCCG Direct Gain 0 0.941453441011717 0 0.392159551382065 prediction 0.882906882023435 Functional Gain - PCF11 ENSG00000165494 CDS Human protein_coding chr11:82868483 chr11:82868483 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_132071 0 0 4 GRWD1 POSTAR2 ENCODE chr11:82868433-82868496
64251 chr3 23930680 23930680 1 + T C rs140378760 23930680 + 23930660 23930700 41 TTGGACATATTGAAAGATAATTGGAGTCCAGCACTAACCAT TTGGACATATTGAAAGATAACTGGAGTCCAGCACTAACCAT Direct Gain 0 0.941364487652907 0 0.263780832290649 prediction 0.882728975305813 Functional Gain - UBE2E1 ENSG00000170142 CDS Human protein_coding chr3:23930680 chr3:23930680 synonymous SNV . 0 21 hm5C_associated_SNPs_132079 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr3:23930591-23930702
64251 chr4 78808417 78808417 1 + T C PAAD 78808417 + 78808397 78808437 41 GGAAGAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGA GGAAGAAAATGGAGCTGCATCTGCAGGAGGCACTAGTCTGA Direct Gain 0 0.941356324772898 0 0.875155091285706 prediction 0.882712649545795 Functional Gain - MRPL1 ENSG00000169288 CDS Human protein_coding chr4:78808417 chr4:78808417 nonsynonymous SNV 0.999 1 21 hm5C_associated_SNPs_132083 0 0 8 NCBP3 POSTAR2 GSE38201,GSM936507 chr4:78808410-78808432
64251 chr9 130550563 130550563 1 + T C SKCM 130550563 + 130550543 130550583 41 GGTCCTGAAGCTGGCAGACTTTGGGCTGGCCCGGGCCTTCA GGTCCTGAAGCTGGCAGACTCTGGGCTGGCCCGGGCCTTCA Direct Gain 0 0.941342038894846 0 0.863568603992462 prediction 0.882684077789691 Functional Gain - CDK9 ENSG00000136807 CDS Human protein_coding chr9:130550563 chr9:130550563 nonsynonymous SNV 0.998 4 21 hm5C_associated_SNPs_132084 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr9:130550552-130550584
64251 chr1 29041129 29041129 1 + T C UCEC 29041129 + 29041109 29041149 41 GAGGATGGGCAGACCATCATTGAGATTGATCCAGCCCCGGA GAGGATGGGCAGACCATCATCGAGATTGATCCAGCCCCGGA Direct Gain 0 0.941304941246611 0 0.653148770332336 prediction 0.882609882493221 Functional Gain - GMEB1 ENSG00000162419 CDS Human protein_coding chr1:29041129 chr1:29041129 synonymous SNV . 0 21 hm5C_associated_SNPs_132094 0 0 1 HNRNPC POSTAR2 GSE56010,GSM1350196 chr1:29041087-29041140
64251 chr9 2123867 2123867 1 + T C UCEC 2123867 + 2123847 2123887 41 AGAAGAGGAGGAGAAAATATTTGGGAGGGGGTCCCGCCAGC AGAAGAGGAGGAGAAAATATCTGGGAGGGGGTCCCGCCAGC Direct Gain 0 0.941249026923109 0 0.859599232673645 prediction 0.882498053846219 Functional Gain - SMARCA2 ENSG00000080503 CDS Human protein_coding chr9:2123867 chr9:2123867 nonsynonymous SNV 0.999 5 21 hm5C_associated_SNPs_132099 0 0 3 SRSF1 POSTAR2 ENCODE chr9:2123859-2123938
64251 chr17 74733003 74733003 1 - C G LUAD 74733003 - 74732983 74733023 41 GCCATGGACGGGGCCGTGCTGGACGGCCGCGAGCTGCGGGT GCCATGGACGGGGCCGTGCTCGACGGCCGCGAGCTGCGGGT Direct Gain 0 0.941238749269847 0 0.898660838603973 prediction 0.882477498539695 Functional Gain - SRSF2 ENSG00000161547 CDS Human protein_coding chr17:74733003 chr17:74733003 synonymous SNV . 0 21 hm5C_associated_SNPs_132100 0 0 9 TIAL1 POSTAR2 E-MTAB-432,ERR039779-ERR039781-ERR039782 chr17:74732984-74733005
64251 chr11 30352809 30352809 1 + T C LUAD 30352809 + 30352789 30352829 41 CACTTTTCTGAGTGCTAAATTTGGAAGACAGCTTGTACCTG CACTTTTCTGAGTGCTAAATCTGGAAGACAGCTTGTACCTG Direct Gain 0 0.941193874500415 0 0.551990032196045 prediction 0.88238774900083 Functional Gain - ARL14EP ENSG00000152219 CDS Human protein_coding chr11:30352809 chr11:30352809 nonsynonymous SNV 0.987 2 21 hm5C_associated_SNPs_132102 0 0 2 LIN28B POSTAR2 GSE46908,GSM1140829 chr11:30352787-30352823
64251 chr17 65714065 65714065 1 + T C COAD 65714065 + 65714045 65714085 41 GTACTTAGGTTTGCTCAAAATGGCAGCGCTGGAGGAAGAAT GTACTTAGGTTTGCTCAAAACGGCAGCGCTGGAGGAAGAAT Direct Gain 0 0.941175038238684 0 0.650784373283386 prediction 0.882350076477369 Functional Gain - NOL11 ENSG00000130935 CDS Human protein_coding chr17:65714065 chr17:65714065 nonsynonymous SNV 0.942 4 21 hm5C_associated_SNPs_132103 0 0 14 EIF3G POSTAR2 GSE65004,GSM1585675 chr17:65714057-65714075
64251 chr9 130454111 130454111 1 + T C rs376329361 130454111 + 130454091 130454131 41 TGGAGAAGGTTCTTGGCCCGTTGGACTCACACAGACCCTGT TGGAGAAGGTTCTTGGCCCGCTGGACTCACACAGACCCTGT Direct Gain 0 0.941172963337544 0 0.465183734893799 prediction 0.882345926675089 Functional Gain - STXBP1 ENSG00000136854 UTR3 Human protein_coding chr9:130454111 chr9:130454111 . . 0 21 hm5C_associated_SNPs_132104 0 0 1 YTHDF3 POSTAR2 GSE83438,GSM2203040 chr9:130454095-130454124
64251 chr17 15604513 15604513 1 + G C BLCA 15604513 + 15604493 15604533 41 TCCAAGAGAAGAGCACAGAAGAGGGAGAAGTGGCTGCTCTG TCCAAGAGAAGAGCACAGAACAGGGAGAAGTGGCTGCTCTG Direct Gain 0 0.941155291940593 0 0.886909365653992 prediction 0.882310583881187 Functional Gain - ZNF286A ENSG00000187607;ENSG00000255104 CDS Human other chr17:15604513 chr17:15604513 nonsynonymous SNV 0.988 0 21 hm5C_associated_SNPs_132106 0 0 1 PRPF8 POSTAR2 ENCODE chr17:15604500-15604590
64251 chr6 2766465 2766465 1 + T C rs8333 2766465 + 2766445 2766485 41 GCCACCGCCTTCGGGGCCAGTGGCGGGGGCCGCCCGCACCC GCCACCGCCTTCGGGGCCAGCGGCGGGGGCCGCCCGCACCC Direct Gain 0 0.941150982764711 0 0.941564440727234 prediction 0.882301965529421 Functional Gain - WRNIP1 ENSG00000124535 CDS Human protein_coding chr6:2766465 chr6:2766465 synonymous SNV . 0 21 hm5C_associated_SNPs_132107 0 0 5 DDX24 POSTAR2 ENCODE chr6:2766436-2766489
64251 chr17 77758204 77758204 1 + T C UCEC 77758204 + 77758184 77758224 41 TGGGGCTGTGGAGCAGAAAGTGGGGAACACAGGGGGCCCCC TGGGGCTGTGGAGCAGAAAGCGGGGAACACAGGGGGCCCCC Direct Gain 0 0.941147999192525 0 0.971473217010498 prediction 0.88229599838505 Functional Gain - CBX2 ENSG00000173894 CDS Human protein_coding chr17:77758204 chr17:77758204 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_132108 0 0 4 YTHDF1 POSTAR2 GSE78030,GSM2064705 chr17:77758200-77758220
64251 chr16 89940235 89940235 1 + G C CESC 89940235 + 89940215 89940255 41 GTCCCGGGGGCGCAGGGAAGGAGGGCGTCCGAGTCAACAAC GTCCCGGGGGCGCAGGGAAGCAGGGCGTCCGAGTCAACAAC Direct Gain 0 0.941075690163266 0 0.921658635139465 prediction 0.882151380326532 Functional Gain - TCF25 ENSG00000141002 CDS Human protein_coding chr16:89940235 chr16:89940235 nonsynonymous SNV 0.074 1 21 hm5C_associated_SNPs_132116 0 0 6 DDX24 POSTAR2 ENCODE chr16:89940219-89940250
64251 chr3 100148663 100148663 1 + G C LUAD 100148663 + 100148643 100148683 41 AGCTGGAGAGAGGAGGATCAGAGAGGACTCCGGGAACGCCA AGCTGGAGAGAGGAGGATCACAGAGGACTCCGGGAACGCCA Direct Gain 0 0.940943633979466 0 0.762510657310486 prediction 0.881887267958932 Functional Gain - LNP1 ENSG00000206535 CDS Human protein_coding chr3:100148663 chr3:100148663 nonsynonymous SNV 0.964 1 21 hm5C_associated_SNPs_132135 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr3:100148616-100148668
64251 chr1 1375207 1375207 1 + T C rs140247431 1375207 + 1375187 1375227 41 CGAGAGGGCCGGCGCCTACCTGAGGGCCCCTGTGTCCCGAA CGAGAGGGCCGGCGCCTACCCGAGGGCCCCTGTGTCCCGAA Direct Gain 0 0.940894243790007 0 0.922277808189392 prediction 0.881788487580013 Functional Gain - VWA1 ENSG00000179403 UTR3 Human protein_coding chr1:1375207 chr1:1375207 . . 0 21 hm5C_associated_SNPs_132139 0 0 1 LARP4 POSTAR2 ENCODE chr1:1375144-1375244
64251 chr1 230804444 230804444 1 + T C UCEC 230804444 + 230804424 230804464 41 CCCTTTTGACTGGACAAATTTTGGAGAGAATTGCCACAGAA CCCTTTTGACTGGACAAATTCTGGAGAGAATTGCCACAGAA Direct Gain 0 0.940885501547538 0 0.802412033081055 prediction 0.881771003095077 Functional Gain - COG2 ENSG00000135775 CDS Human protein_coding chr1:230804444 chr1:230804444 synonymous SNV . 0 21 hm5C_associated_SNPs_132140 0 0 6 HNRNPC POSTAR2 GSE56010,GSM1350201 chr1:230804432-230804460
64251 chr12 124155867 124155867 1 + T C UCEC 124155867 + 124155847 124155887 41 GAGGCTTCTGTGGGGGGACCTGGGTGTGTACGGCGCGGCAG GAGGCTTCTGTGGGGGGACCCGGGTGTGTACGGCGCGGCAG Direct Gain 0 0.9408723219226 0 0.943708181381226 prediction 0.881744643845201 Functional Gain - TCTN2 ENSG00000168778 CDS Human protein_coding chr12:124155867 chr12:124155867 nonsynonymous SNV 0.848 1 21 hm5C_associated_SNPs_132142 0 0 1 TARDBP POSTAR2 DRA001158,DRS012387 chr12:124155847-124155887
64251 chr7 2703073 2703073 1 + G C rs190822652 2703073 + 2703053 2703093 41 GGAATATGGGAGGGCAGAGTGGGGAGGGGAGTCCATGGGCC GGAATATGGGAGGGCAGAGTCGGGAGGGGAGTCCATGGGCC Direct Gain 0 0.940793973680994 0 0.94806694984436 prediction 0.881587947361987 Functional Gain - TTYH3 ENSG00000136295 UTR3 Human protein_coding chr7:2703073 chr7:2703073 . . 0 21 hm5C_associated_SNPs_132149 0 0 4 EIF3H POSTAR2 ENCODE chr7:2703043-2703111
64251 chr19 55899444 55899444 1 + G C OV 55899444 + 55899424 55899464 41 GGGGTTTGGGGATCAGGCTTGGGGAGACTGGCCAGTGCTGT GGGGTTTGGGGATCAGGCTTCGGGAGACTGGCCAGTGCTGT Direct Gain 0 0.940756314043533 0 0.967136740684509 prediction 0.881512628087065 Functional Gain - RPL28 ENSG00000108107 CDS Human protein_coding chr19:55899444 chr19:55899444 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_132153 0 0 8 BUD13 POSTAR2 ENCODE chr19:55899434-55899476
64251 chr2 152266473 152266473 1 + T C rs2290368 152266473 + 152266453 152266493 41 CGTGAGTAAACAGCCGGAGCTGGGAAAGTCGAGCTCTGGCA CGTGAGTAAACAGCCGGAGCCGGGAAAGTCGAGCTCTGGCA Direct Gain 0 0.94074724179302 0 0.887060642242432 prediction 0.881494483586041 Functional Gain - RIF1 ENSG00000080345 CDS Human protein_coding chr2:152266473 chr2:152266473 unknown . 0 21 hm5C_associated_SNPs_132154 0 0 10 DDX3X POSTAR2 GSE70804,GSM1819210 chr2:152266460-152266480
64251 chr6 79944355 79944355 1 - T G rs9361504 79944355 - 79944335 79944375 41 CTGCGCGTGAGCAGCTGCAGAGGCAGAGGCAGCATCCAGCG CTGCGCGTGAGCAGCTGCAGCGGCAGAGGCAGCATCCAGCG Direct Gain 0 0.940728854646818 0 0.426091581583023 prediction 0.881457709293635 Functional Gain - HMGN3-AS1 ENSG00000270362 ncRNA_exonic Human antisense chr6:79944355 chr6:79944355 . . 0 21 hm5C_associated_SNPs_132156 0 0 3 DDX3X POSTAR2 GSE70804,GSM1819216 chr6:79944280-79944360
64251 chr1 203015095 203015095 1 + A C rs111721656 203015095 + 203015075 203015115 41 TGGAGAATGAGCTGGCCAACAAGGAGTCCCTGCACCGCCAG TGGAGAATGAGCTGGCCAACCAGGAGTCCCTGCACCGCCAG Direct Gain 0 0.940689641277371 0 0.945356965065002 prediction 0.881379282554742 Functional Gain - PPFIA4 ENSG00000143847 CDS Human protein_coding chr1:203015095 chr1:203015095 nonsynonymous SNV 1.000 2 21 hm5C_associated_SNPs_132159 0 0 4 DDX24 POSTAR2 ENCODE chr1:203015088-203015111
64251 chr9 82335048 82335048 1 + T C HNSC 82335048 + 82335028 82335068 41 AAGCCAGTACTTTGTCCATTTGGGACCTGGCGGCTCCAACC AAGCCAGTACTTTGTCCATTCGGGACCTGGCGGCTCCAACC Direct Gain 0 0.940619941738554 0 0.953619778156281 prediction 0.881239883477108 Functional Gain - TLE4 ENSG00000106829 CDS Human protein_coding chr9:82335048 chr9:82335048 nonsynonymous SNV 1.000 4 21 hm5C_associated_SNPs_132168 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr9:82335032-82335075
64251 chr19 30433560 30433560 1 + G C PAAD 30433560 + 30433540 30433580 41 ATGTGGCGCGGCTGCGCGAGGAGCAGGAAAAGGTAACTAGC ATGTGGCGCGGCTGCGCGAGCAGCAGGAAAAGGTAACTAGC Direct Gain 0 0.940618027510569 0 0.505591750144958 prediction 0.881236055021139 Functional Gain - URI1 ENSG00000105176 CDS Human protein_coding chr19:30433560 chr19:30433560 nonsynonymous SNV 0.994 0 21 hm5C_associated_SNPs_132170 0 0 7 ATXN2 POSTAR2 DRA001158,DRS012389 chr19:30433539-30433566
64251 chr1 11082344 11082344 1 + G C BLCA 11082344 + 11082324 11082364 41 GGGTGGATTTGGTAATAGCAGAGGGGGTGGAGCTGGTTTGG GGGTGGATTTGGTAATAGCACAGGGGGTGGAGCTGGTTTGG Direct Gain 0 0.940611918632202 0 0.815621614456177 prediction 0.881223837264403 Functional Gain - TARDBP ENSG00000120948 CDS Human protein_coding chr1:11082344 chr1:11082344 nonsynonymous SNV 0.999 3 21 hm5C_associated_SNPs_132172 0 0 20 TARDBP POSTAR2 DRA001158,DRS012387 chr1:11082178-11082508
64251 chr11 64087313 64087313 1 + T C COAD 64087313 + 64087293 64087333 41 GGTGTGCTGTTTGGAGTTCCTGGGGCCTTCACCCCTGGATG GGTGTGCTGTTTGGAGTTCCCGGGGCCTTCACCCCTGGATG Direct Gain 0 0.940600773638281 0 0.924065232276917 prediction 0.881201547276563 Functional Gain - PRDX5 ENSG00000126432 CDS Human protein_coding chr11:64087313 chr11:64087313 synonymous SNV . 0 21 hm5C_associated_SNPs_132173 0 0 4 ATXN2 POSTAR2 DRA001158,DRS012390 chr11:64087289-64087314
64251 chr1 7840599 7840599 1 + T C rs114023518 7840599 + 7840579 7840619 41 TGCATGGGGGTTAGAGAAGGTTTGAGGTAGACTCTGACCGT TGCATGGGGGTTAGAGAAGGCTTGAGGTAGACTCTGACCGT Direct Gain 0 0.940513543324162 0 0.232115536928177 prediction 0.881027086648323 Functional Gain - VAMP3 ENSG00000049245 UTR3 Human protein_coding chr1:7840599 chr1:7840599 . . 0 21 hm5C_associated_SNPs_132180 0 0 15 TARDBP POSTAR2 DRA001158,DRS012386 chr1:7840536-7840604
64251 chr7 2394746 2394746 1 + T C rs9690787 2394746 + 2394726 2394766 41 TCGCGGAGGCCGGGCCGGAGTCCGAGGTGAGGACCGAGCCG TCGCGGAGGCCGGGCCGGAGCCCGAGGTGAGGACCGAGCCG Direct Gain 0 0.940483991834373 0 0.53077095746994 prediction 0.880967983668747 Functional Gain - EIF3B ENSG00000106263 CDS Human protein_coding chr7:2394746 chr7:2394746 nonsynonymous SNV 0.000 0 21 hm5C_associated_SNPs_132181 0 0 20 DGCR8 POSTAR2 GSE39086,GSM955512 chr7:2394740-2394760
64251 chr20 62896714 62896714 1 + G C LUSC 62896714 + 62896694 62896734 41 GTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAG GTGGGGCTGGCGTGCAGAAACAGCATGAAGAGTACATGAAG Direct Gain 0 0.940369050579592 0 0.426568895578384 prediction 0.880738101159184 Functional Gain - PCMTD2 ENSG00000203880 CDS Human protein_coding chr20:62896714 chr20:62896714 nonsynonymous SNV 0.961 1 21 hm5C_associated_SNPs_132190 0 0 8 CPSF7 POSTAR2 GSE37401,GSM917663 chr20:62896619-62896720
64251 chr12 98926791 98926791 1 + T C STAD 98926791 + 98926771 98926811 41 ACTTCTAAGGGAGACCTACCTAGGGAGCCTCTTGTTGCCAC ACTTCTAAGGGAGACCTACCCAGGGAGCCTCTTGTTGCCAC Direct Gain 0 0.94026956139892 0 0.963011801242828 prediction 0.88053912279784 Functional Gain - TMPO ENSG00000120802 CDS Human protein_coding chr12:98926791 chr12:98926791 synonymous SNV . 0 21 hm5C_associated_SNPs_132198 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr12:98926761-98926793
64251 chr17 22023463 22023463 1 + T C rs77383618 22023463 + 22023443 22023483 41 CCGTGAAGAGGCGGACATAATACAACAAGACGAGAAGACCC CCGTGAAGAGGCGGACATAACACAACAAGACGAGAAGACCC Direct Gain 0 0.940240928077965 0 0.552139401435852 prediction 0.88048185615593 Functional Gain - MTRNR2L1 ENSG00000256618 UTR3 Human protein_coding chr17:22023463 chr17:22023463 . . 0 21 hm5C_associated_SNPs_132201 0 0 1 DHX30 POSTAR2 ENCODE chr17:22023440-22023476
64251 chr1 20517880 20517880 1 + G C LUSC 20517880 + 20517860 20517900 41 TGGGCATCTCACTGGAAGATGGGGAAGGGTGGCCCTGAGTC TGGGCATCTCACTGGAAGATCGGGAAGGGTGGCCCTGAGTC Direct Gain 0 0.940121834533253 0 0.862965226173401 prediction 0.880243669066506 Functional Gain - UBXN10 ENSG00000162543 CDS Human protein_coding chr1:20517880 chr1:20517880 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_132209 0 0 1 RBM15 POSTAR2 ENCODE chr1:20517849-20517905
64251 chr8 124820546 124820546 1 + T C STAD 124820546 + 124820526 124820566 41 GCTTCTGGCTCAGATGTAAATGGGAGTACAGAGTCATTTGA GCTTCTGGCTCAGATGTAAACGGGAGTACAGAGTCATTTGA Direct Gain 0 0.940114879996705 0 0.89301061630249 prediction 0.880229759993409 Functional Gain - FAM91A1 ENSG00000176853 CDS Human protein_coding chr8:124820546 chr8:124820546 synonymous SNV . 0 21 hm5C_associated_SNPs_132213 0 0 2 GRWD1 POSTAR2 ENCODE chr8:124820542-124820622
64251 chr5 32098541 32098541 1 - A G COAD 32098541 - 32098521 32098561 41 GCCAGTGAGGCGCCGTTGACTGACAGAAGGAAATCCCCTCG GCCAGTGAGGCGCCGTTGACCGACAGAAGGAAATCCCCTCG Direct Gain 0 0.940090225362725 0 0.580901265144348 prediction 0.88018045072545 Functional Gain - PDZD2 ENSG00000133401 CDS Human protein_coding chr5:32098541 chr5:32098541 synonymous SNV . 0 21 hm5C_associated_SNPs_132216 0 0 4 HNRNPC POSTAR2 GSE56010,GSM1350201 chr5:32098537-32098548
64251 chr11 838373 838373 1 + G C rs539779639 838373 + 838353 838393 41 TGCCCAGCAGGGGAGGTGAGGGGGGCTGGCGGGGCGAAGTT TGCCCAGCAGGGGAGGTGAGCGGGGCTGGCGGGGCGAAGTT Direct Gain 0 0.940067467291039 0 0.907980442047119 prediction 0.880134934582078 Functional Gain - CD151 ENSG00000177697 UTR3 Human protein_coding chr11:838373 chr11:838373 . . 0 21 hm5C_associated_SNPs_132218 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012391 chr11:838351-838389
64251 chr15 40757594 40757594 1 + G C BLCA 40757594 + 40757574 40757614 41 AGAACAGTGTGGCCTGCATTGAGGAGAAGTGCTATGTGCTG AGAACAGTGTGGCCTGCATTCAGGAGAAGTGCTATGTGCTG Direct Gain 0 0.940044237419246 0 0.937997817993164 prediction 0.880088474838493 Functional Gain - BAHD1 ENSG00000140320 CDS Human protein_coding chr15:40757594 chr15:40757594 nonsynonymous SNV 0.997 5 21 hm5C_associated_SNPs_132220 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012391 chr15:40757578-40757626
64251 chr4 44680652 44680652 1 + G C READ 44680652 + 44680632 44680672 41 CCCGGGTCATGTGGACCCTCGTGGGTCGGGGCTGGGGGTGC CCCGGGTCATGTGGACCCTCCTGGGTCGGGGCTGGGGGTGC Direct Gain 0 0.939977006352516 0 0.755647659301758 prediction 0.879954012705032 Functional Gain - GUF1 ENSG00000151806 CDS Human protein_coding chr4:44680652 chr4:44680652 nonsynonymous SNV 0.002 0 21 hm5C_associated_SNPs_132224 0 0 3 LIN28B POSTAR2 GSE46908,GSM1140829 chr4:44680645-44680673
64251 chr8 42396754 42396754 1 - C G rs555855005 42396754 - 42396734 42396774 41 GCGCGCGGGAAACGGTTACCGAGCGGACCTGGACGCCCTCT GCGCGCGGGAAACGGTTACCCAGCGGACCTGGACGCCCTCT Direct Gain 0 0.939924672856411 0 0.969314754009247 prediction 0.879849345712822 Functional Gain - SMIM19 ENSG00000176209 UTR5 Human protein_coding chr8:42396754 chr8:42396754 . . 0 21 hm5C_associated_SNPs_132229 0 0 10 HNRNPC POSTAR2 GSE56010,GSM1350197 chr8:42396708-42396763
64251 chr3 16343302 16343302 1 + A C UCEC 16343302 + 16343282 16343322 41 CCTCAGAGAGCAGGCAAACAAAAGAAATGGATATGAGATAG CCTCAGAGAGCAGGCAAACACAAGAAATGGATATGAGATAG Direct Gain 0 0.939840886531924 0 0.519748985767365 prediction 0.879681773063848 Functional Gain - OXNAD1 ENSG00000154814 CDS Human protein_coding chr3:16343302 chr3:16343302 nonsynonymous SNV 0.001 0 21 hm5C_associated_SNPs_132234 0 0 5 TARDBP POSTAR2 DRA001158,DRS012387 chr3:16343277-16343330
64251 chr6 21595265 21595265 1 + G C UCEC 21595265 + 21595245 21595285 41 CAGTGGCGGGGGCGGCCATGGGGGCGGCGGCGGCGGCGGGA CAGTGGCGGGGGCGGCCATGCGGGCGGCGGCGGCGGCGGGA Direct Gain 0 0.939711529577017 0 0.904994606971741 prediction 0.879423059154035 Functional Gain - SOX4 ENSG00000124766 CDS Human protein_coding chr6:21595265 chr6:21595265 nonsynonymous SNV 0.453 0 21 hm5C_associated_SNPs_132241 0 0 1 SLTM POSTAR2 ENCODE chr6:21595253-21595327
64251 chr6 46644524 46644524 1 + G C rs151298041 46644524 + 46644504 46644544 41 TATGCTGAAGAGCCTGCTTAGAGGAGGAGTACCAGGAGGGA TATGCTGAAGAGCCTGCTTACAGGAGGAGTACCAGGAGGGA Direct Gain 0 0.939686547313377 0 0.836264848709106 prediction 0.879373094626755 Functional Gain - LOC101926934 ENSG00000242973 ncRNA_intronic Human antisense chr6:46644524 chr6:46644524 . . 0 21 hm5C_associated_SNPs_132244 0 0 2 ATXN2 POSTAR2 DRA001158,DRS012388 chr6:46644510-46644549
64251 chr19 10801805 10801805 1 + G C rs368770177 10801805 + 10801785 10801825 41 TCAGCAGACCTCGTGTTTAAGGAGAGAATGCCTGCCTGCAA TCAGCAGACCTCGTGTTTAACGAGAGAATGCCTGCCTGCAA Direct Gain 0 0.939602638669002 0 0.702849566936493 prediction 0.879205277338003 Functional Gain - ILF3 ENSG00000129351 UTR3 Human protein_coding chr19:10801805 chr19:10801805 . . 0 21 hm5C_associated_SNPs_132254 0 0 12 CPSF7 POSTAR2 GSE37401,GSM917663 chr19:10801682-10801838
64251 chr17 37819124 37819124 1 + T C UCEC 37819124 + 37819104 37819144 41 GTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGC GTTTGAATTTGCCTTTCACCCGCGACAGCGCATCAGCGAGC Direct Gain 0 0.939586339711337 0 0.768528938293457 prediction 0.879172679422673 Functional Gain - STARD3 ENSG00000131748 CDS Human protein_coding chr17:37819124 chr17:37819124 nonsynonymous SNV 0.995 4 21 hm5C_associated_SNPs_132255 0 0 3 LSM11 POSTAR2 ENCODE chr17:37819110-37819187
64251 chr17 41166208 41166208 1 + G C LUSC 41166208 + 41166188 41166228 41 CCGGAGCTGCATGACGTCCTGGAGATCCACTTCCAGAAGCC CCGGAGCTGCATGACGTCCTCGAGATCCACTTCCAGAAGCC Direct Gain 0 0.939512973202039 0 0.858582019805908 prediction 0.879025946404077 Functional Gain - IFI35 ENSG00000068079 CDS Human protein_coding chr17:41166208 chr17:41166208 synonymous SNV . 0 21 hm5C_associated_SNPs_132260 0 0 9 HNRNPC POSTAR2 GSE56010,GSM1350197 chr17:41166118-41166214
64251 chr16 28847651 28847651 1 + T C COAD 28847651 + 28847631 28847671 41 GCACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAG GCACCTGTCTGTGAAGTATGCAGGGTGGGCAGAAGCCACAG Direct Gain 0 0.939501461617796 0 0.887126505374908 prediction 0.879002923235593 Functional Gain - ATXN2L ENSG00000168488 CDS Human protein_coding chr16:28847651 chr16:28847651 synonymous SNV . 0 21 hm5C_associated_SNPs_132263 0 0 25 PTBP1 POSTAR2 GSE42701,GSM1048186 chr16:28847640-28847660
64251 chr12 105380132 105380132 1 + T C LUAD 105380132 + 105380112 105380152 41 GTGCAGGCTTGAGGGAAGCATGGAGGTCCATGGCAAGCCCA GTGCAGGCTTGAGGGAAGCACGGAGGTCCATGGCAAGCCCA Direct Gain 0 0.939486711286004 0 0.571691930294037 prediction 0.878973422572007 Functional Gain - C12orf45 ENSG00000151131 CDS Human protein_coding chr12:105380132 chr12:105380132 nonsynonymous SNV 0.575 2 21 hm5C_associated_SNPs_132264 0 0 7 DDX3X POSTAR2 GSE70804,GSM1819209 chr12:105380120-105380140
64251 chr19 55900174 55900174 1 + A C rs118132990 55900174 + 55900154 55900194 41 ATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACAT ATGAGATGACTTTTGCATCCCGGGAGTGGGTGCAGCCACAT Direct Gain 0 0.939439714612665 0 0.727132439613342 prediction 0.878879429225329 Functional Gain - RPL28 ENSG00000108107 UTR3 Human protein_coding chr19:55900174 chr19:55900174 . . 0 21 hm5C_associated_SNPs_132268 0 0 11 LIN28B POSTAR2 GSE46908,GSM1140829 chr19:55900137-55900217
64251 chr4 25334974 25334974 1 + A C OV 25334974 + 25334954 25334994 41 TCCTTTATCCACTGGAAAACAAGAAGACAAATGCCCAGTAT TCCTTTATCCACTGGAAAACCAGAAGACAAATGCCCAGTAT Direct Gain 0 0.939434712041584 0 0.544879555702209 prediction 0.878869424083169 Functional Gain - ZCCHC4 ENSG00000168228 CDS Human protein_coding chr4:25334974 chr4:25334974 nonsynonymous SNV 0.999 2 21 hm5C_associated_SNPs_132272 0 0 5 ATXN2 POSTAR2 DRA001158,DRS012388 chr4:25334939-25334976